4015 190 42 32 chr10 1524 2418 -140314347 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -140314256 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -140313606 - L1MB3 LINE L1 0 6183 5959 609 98 6 58 chr10 3583 3757 -140313008 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 4029 4321 -140312444 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 4609 4906 -140311859 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 5270 5565 -140311200 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 7295 7332 -140309433 + Alu SINE Alu 1 37 -262 2245 109 0 7 chr10 8393 8695 -140308070 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 8766 8846 -140307919 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 8869 9180 -140307585 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 9180 9338 -140307427 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 11525 11831 -140304934 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 12351 12388 -140304377 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 12865 13162 -140303603 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 13162 13185 -140303580 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 13641 13836 -140302929 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 14043 14418 -140302347 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 14609 14677 -140302088 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 14730 14759 -140302006 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 14762 14948 -140301817 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 15243 15508 -140301257 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 16010 16077 -140300688 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 16107 16407 -140300358 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 16502 16529 -140300236 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 17676 17767 -140298998 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 17805 17879 -140298886 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 18508 18789 -140297976 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 19125 19172 -140297593 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 19377 19673 -140297092 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 19944 20006 -140296759 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 22670 22705 -140294060 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 23143 23234 -140293531 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 23343 26978 -140289787 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 27092 27253 -140289512 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 27262 27747 -140289018 + L2 LINE L2 2069 2568 -746 2245 234 114 76 chr10 28199 28504 -140288261 - L1M4 LINE L1 -408 5770 5478 1924 131 13 19 chr10 28504 28818 -140287947 - AluJb SINE Alu 0 312 1 2245 234 114 76 chr10 28818 30228 -140286537 - L1M4 LINE L1 -700 5478 3952 13169 160 42 23 chr10 30228 32601 -140284164 - Tigger1 DNA MER2_type 0 2418 1 2245 234 114 76 chr10 32601 32869 -140283896 - L1M4 LINE L1 -2226 3952 3696 800 255 200 43 chr10 32912 33476 -140283289 - HAL1 LINE L1 -571 1936 1284 893 210 99 67 chr10 33513 33885 -140282880 - HAL1 LINE L1 -1320 1187 804 246 333 114 21 chr10 34173 34408 -140282357 + L2 LINE L2 2732 2987 -285 1025 277 41 32 chr10 34442 34781 -140281984 - MLT1I LTR MaLR -6 403 62 240 258 52 0 chr10 34926 35023 -140281742 + HAL1 LINE L1 2331 2432 -75 672 289 213 49 chr10 35103 35774 -140280991 + L2 LINE L2 1718 2498 -816 1932 206 29 55 chr10 35907 36417 -140280348 + L1M4 LINE L1 4726 5222 -924 660 179 49 24 chr10 37547 37670 -140279095 + FLAM_A SINE Alu 1 126 -7 2683 172 25 25 chr10 37809 38298 -140278467 + L1MCa LINE L1 26 514 -5912 3316 206 47 47 chr10 38458 39396 -140277369 - MER52A LTR ERV1 -656 1099 85 4003 170 30 30 chr10 39735 40452 -140276313 - MER4E LTR ERV1 -3 776 57 4147 153 9 8 chr10 40452 41086 -140275679 - MER41B LTR ERV1 0 635 1 4003 170 30 30 chr10 41086 41144 -140275621 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 41464 41510 -140275255 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 42284 42337 -140274428 + AT_rich Low_complexity Low_complexity 1 53 0 2313 112 0 0 chr10 42445 42748 -140274017 - AluSx SINE Alu -9 303 1 2039 111 7 7 chr10 42819 43099 -140273666 - AluSq SINE Alu -33 280 1 707 219 128 27 chr10 43291 43478 -140273287 - MER3 DNA MER1_type -3 206 1 2075 134 0 0 chr10 44243 44560 -140272205 - AluSx SINE Alu 0 317 1 2202 137 137 8 chr10 44631 45010 -140271755 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 45401 45453 -140271312 + (TA)n Simple_repeat Simple_repeat 2 54 0 4335 85 15 102 chr10 45717 46444 -140270321 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 47315 47485 -140269280 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 48198 48496 -140268269 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 49138 49276 -140267489 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 49305 49331 -140267434 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 49685 49885 -140266880 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 49892 49993 -140266772 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 50005 50296 -140266469 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 50719 50996 -140265769 - AluJo SINE Alu -38 274 1 398 164 0 0 chr10 51360 51433 -140265332 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 51437 51487 -140265278 + AT_rich Low_complexity Low_complexity 1 50 0 1348 176 33 0 chr10 53219 53464 -140263301 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 54083 54128 -140262637 + GC_rich Low_complexity Low_complexity 1 45 0 385 144 70 0 chr10 54368 54457 -140262308 + AluJ/FRAM SINE Alu 219 298 -4 1294 239 12 60 chr10 54459 54881 -140261884 - L1M4 LINE L1 -1293 4853 4455 1880 149 0 3 chr10 54881 55190 -140261575 - AluY SINE Alu -3 308 1 1294 239 12 60 chr10 55190 55248 -140261517 - L1M4 LINE L1 -1691 4455 4396 901 214 25 5 chr10 55248 55449 -140261316 - AluJo SINE Alu -21 291 87 290 56 0 0 chr10 55470 55506 -140261259 - MER31-int LTR ERV1 -3839 1097 1062 691 132 0 0 chr10 55506 55612 -140261153 + MLT2B3 LTR ERVL 1 106 -448 227 343 36 0 chr10 56408 56548 -140260217 - L1MC4 LINE L1 -524 7518 7374 215 339 27 18 chr10 56557 56669 -140260096 + L2 LINE L2 2687 2799 -515 1150 165 148 8 chr10 57108 57351 -140259414 + AluJb SINE Alu 1 277 -35 302 203 130 0 chr10 57362 57431 -140259334 + LTR35 LTR ERV1 453 530 -88 441 169 26 0 chr10 57492 57569 -140259196 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 57615 57636 -140259129 + AT_rich Low_complexity Low_complexity 1 21 0 1479 45 0 0 chr10 57746 57922 -140258843 - L1PA3 LINE L1 -2 6153 5978 1781 133 10 20 chr10 58031 58333 -140258432 + AluSx SINE Alu 13 311 -1 1945 144 0 10 chr10 58491 58804 -140257961 + AluSx SINE Alu 1 310 -2 1768 107 50 7 chr10 58812 59092 -140257673 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 59106 59385 -140257380 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 59405 59728 -140257037 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 59734 60031 -140256734 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 60033 60345 -140256420 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 60666 60745 -140256020 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 60821 61128 -140255637 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 61841 62131 -140254634 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 62785 62834 -140253931 + Alu SINE Alu 15 63 -240 800 192 0 0 chr10 64302 64458 -140252307 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 64647 64958 -140251807 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 65077 65099 -140251666 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 65108 65153 -140251612 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 65176 67115 -140249650 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 67115 67481 -140249284 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 67481 67863 -140248902 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 69600 69718 -140247047 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 69719 69766 -140246999 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 69775 70015 -140246750 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 70312 70987 -140245778 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 70988 73434 -140243331 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 74087 74204 -140242561 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 74648 75112 -140241653 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 75293 75380 -140241385 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 75806 75930 -140240835 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 76185 76206 -140240559 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 76475 76651 -140240114 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 76790 77164 -140239601 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 77100 77370 -140239395 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 77440 77507 -140239258 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 77535 77679 -140239086 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 77712 77872 -140238893 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 77911 78497 -140238268 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 78501 78789 -140237976 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 78801 78886 -140237879 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 78886 78999 -140237766 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 79126 79217 -140237548 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 79374 79492 -140237273 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 79492 79610 -140237155 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 81499 81599 -140235166 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 83131 83187 -140233578 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 84287 84393 -140232372 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 84564 84654 -140232111 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 86822 86944 -140229821 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 86958 87267 -140229498 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 88417 88473 -140228292 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 88719 88812 -140227953 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 88821 88914 -140227851 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 89435 89487 -140227278 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 89914 90060 -140226705 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 91043 91171 -140225594 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 91171 91473 -140225292 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 91473 91486 -140225279 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 91488 92819 -140223946 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 93492 93667 -140223098 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 93961 94015 -140222750 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 94823 95182 -140221583 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 95183 95500 -140221265 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 95506 95566 -140221199 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 95576 95706 -140221059 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 95705 95882 -140220883 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 96001 96108 -140220657 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 96108 96222 -140220543 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 96222 97647 -140219118 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 97647 97999 -140218766 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 98270 98492 -140218273 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 98494 98664 -140218101 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 98664 98968 -140217797 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 98968 100152 -140216613 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 100152 100588 -140216177 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 100755 101058 -140215707 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 101111 101162 -140215603 + AT_rich Low_complexity Low_complexity 1 51 0 1492 180 71 4 chr10 101166 101433 -140215332 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 101585 101940 -140214825 + MLT1A2 LTR MaLR 1 370 -4 239 316 61 10 chr10 102340 102438 -140214327 + MIR SINE MIR 82 184 -78 1797 150 83 107 chr10 102807 103057 -140213708 + MER4B LTR ERV1 3 239 -371 2331 82 0 7 chr10 103057 103361 -140213404 + AluY SINE Alu 10 311 0 1797 150 83 107 chr10 103361 103570 -140213195 + MER4B LTR ERV1 239 451 -159 2837 177 58 6 chr10 104006 104521 -140212244 - MER52A LTR ERV1 0 1755 1214 4907 192 76 14 chr10 104652 105913 -140210852 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -140210812 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -140209645 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -140209399 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -140209030 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -140207798 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -140207546 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -140206770 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -140205990 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -140205680 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -140205505 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -140204377 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -140204095 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -140203178 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -140202657 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -140200575 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -140199649 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -140197110 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -140195431 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -140195139 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -140194137 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -140193922 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -140193303 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -140192218 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -140191935 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -140191793 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -140191460 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -140191179 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -140191092 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -140190640 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -140190197 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -140189824 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -140186109 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -140185999 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -140185714 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -140185603 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -140185415 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -140185243 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -140185221 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -140184994 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -140184871 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -140184611 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -140183840 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -140182363 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -140182224 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -140181962 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -140181838 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -140181344 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -140180881 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -140180224 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -140179734 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -140179081 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -140178604 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -140177851 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -140176899 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -140176489 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -140176394 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -140174232 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -140172753 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -140172122 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -140170998 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -140169592 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -140168546 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -140167911 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -140167541 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -140162104 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -140161987 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -140159796 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -140159384 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -140159372 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -140155249 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -140154946 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -140154832 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -140154509 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -140154206 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -140152244 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -140152000 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -140150433 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -140150374 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -140150285 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -140150075 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -140147946 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -140147147 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -140146574 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -140146178 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -140145647 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -140145217 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -140142871 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -140142851 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -140142737 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -140142520 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -140142437 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -140140566 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -140140104 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -140139761 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -140138515 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -140136797 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -140132028 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -140129867 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -140129269 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -140126992 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -140126461 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -140126004 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -140124663 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -140121565 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -140121261 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -140119701 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -140118742 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -140118467 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -140116925 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -140116346 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -140115992 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -140114375 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -140113639 - MADE1 DNA Mariner -14 66 1 528 240 14 4 chr10 206559 206768 -140109997 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -140109784 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -140107213 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -140107099 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -140106735 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -140106619 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -140106557 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -140106247 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -140106113 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -140105994 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -140105563 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -140104819 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -140104652 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -140104598 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -140103942 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -140103345 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -140102408 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -140102375 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -140101350 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -140100791 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -140099507 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -140098946 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -140098796 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -140098754 - Tigger3b DNA MER2_type -386 846 802 2822 193 97 50 chr10 218172 218396 -140098369 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -140098060 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -140097480 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -140097279 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -140097079 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -140096540 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -140095954 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -140095888 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -140094641 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -140092886 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -140092040 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -140088165 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -140086961 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -140086415 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -140085651 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -140084882 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -140084858 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -140084560 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -140082739 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -140081426 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -140081170 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -140079206 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -140077662 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -140076731 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -140075251 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -140072787 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -140072076 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -140071866 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -140071234 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -140068361 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -140067821 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -140067466 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -140067078 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -140066738 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -140066046 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -140065281 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -140065097 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -140063846 - LTR49-int LTR ERV1 -3127 3204 2565 2404 82 0 25 chr10 252924 253243 -140063522 + AluY SINE Alu 1 311 0 2133 127 14 0 chr10 253271 253563 -140063202 - AluSg1 SINE Alu -13 296 1 1764 227 52 22 chr10 253563 254070 -140062695 - LTR49-int LTR ERV1 -3858 2473 1517 601 150 74 104 chr10 254144 254298 -140062467 - LTR49-int LTR ERV1 -2645 2235 2078 2062 113 46 0 chr10 254298 254580 -140062185 + AluSc SINE Alu 3 297 -12 601 150 74 104 chr10 254580 254671 -140062094 - LTR49-int LTR ERV1 -2802 2078 1501 250 146 0 36 chr10 254670 254725 -140062040 - LTR49-int LTR ERV1 -4996 1335 1283 * 254 268 42 0 chr10 254725 254796 -140061969 - tRNA-Glu-GAG tRNA tRNA 0 75 2 261 244 13 13 chr10 254818 254896 -140061869 - LTR49-int LTR ERV1 -5138 1193 1116 322 172 0 31 chr10 255022 255086 -140061679 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -140060432 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -140060128 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -140059816 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -140059638 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -140058495 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -140057274 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -140057153 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -140056426 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -140054766 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -140053994 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -140051636 + AluSc SINE Alu 1 298 -11 529 308 174 49 chr10 368608 369219 -139947546 + HAL1 LINE L1 1417 2103 -404 24 96 0 0 chr10 370491 370564 -139946201 + AT_rich Low_complexity Low_complexity 1 73 0 1214 115 6 22 chr10 371568 371751 -139945014 + AluSq SINE Alu 124 303 -10 257 250 15 15 chr10 372651 372719 -139944046 - MIR SINE MIR -114 148 81 319 296 30 24 chr10 373299 373468 -139943297 + (TCTA)n Simple_repeat Simple_repeat 3 172 0 284 318 34 0 chr10 373513 373601 -139943164 + L2 LINE L2 3182 3272 -41 208 403 86 0 chr10 373641 373827 -139942938 - L2 LINE L2 -457 2857 2656 2262 123 0 0 chr10 373885 374186 -139942579 + AluSx SINE Alu 1 301 -11 2125 108 3 48 chr10 374709 375023 -139941742 - AluSp SINE Alu -13 300 1 2727 87 0 3 chr10 375543 375923 -139940842 - L1PA7 LINE L1 -7 6147 5769 1877 85 60 0 chr10 375927 375959 -139940806 - L1P5 LINE L1 -334 5822 5793 16146 31 3 0 chr10 375959 378732 -139938033 - L1PA2 LINE L1 -2 6153 3372 1877 85 60 0 chr10 378732 379000 -139937765 - L1P5 LINE L1 -363 5793 5498 2059 144 3 7 chr10 379570 379875 -139936890 - AluSg SINE Alu -6 304 1 1810 150 28 0 chr10 384064 384350 -139932415 - AluJo SINE Alu -18 294 1 2561 68 10 0 chr10 387809 388117 -139928648 - AluY SINE Alu 0 311 1 193 279 15 29 chr10 388645 388713 -139928052 - MIR SINE MIR -118 144 78 246 67 133 0 chr10 392807 392852 -139923913 + Alu SINE Alu 238 288 -14 2750 209 39 46 chr10 394981 395697 -139921068 + L1MA9 LINE L1 5495 6205 -107 653 227 85 0 chr10 395842 396018 -139920747 + MER2 DNA MER2_type 1 191 -154 238 279 58 0 chr10 396241 396327 -139920438 + MER2 DNA MER2_type 101 191 -154 248 260 52 0 chr10 396639 396716 -139920049 + MER2 DNA MER2_type 101 181 -164 280 264 46 0 chr10 396880 396967 -139919798 + MER2 DNA MER2_type 101 191 -154 251 263 66 0 chr10 396960 397036 -139919729 + MER2 DNA MER2_type 101 181 -164 * 781 245 46 33 chr10 397039 397084 -139919681 + MER2 DNA MER2_type 101 144 -201 2198 103 0 3 chr10 397084 397366 -139919399 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 397368 397388 -139919377 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 781 245 46 33 chr10 397388 397580 -139919185 + MER2 DNA MER2_type 144 344 -1 1704 176 25 0 chr10 398123 398407 -139918358 - AluJb SINE Alu -21 291 1 942 167 12 153 chr10 399588 400037 -139916728 - THE1B LTR MaLR 0 364 1 180 217 87 0 chr10 400767 400813 -139915952 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 401984 402102 -139914663 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 402104 402388 -139914377 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 402590 402754 -139914011 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 402769 403172 -139913593 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 403562 403643 -139913122 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 405212 405240 -139911525 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 409544 409661 -139907104 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 410374 410519 -139906246 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 412519 412848 -139903917 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 412875 413186 -139903579 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 415682 415991 -139900774 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 416582 416659 -139900106 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 418692 419012 -139897753 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 421748 421812 -139894953 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 422029 423084 -139893681 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 424684 424786 -139891979 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 426098 426208 -139890557 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 428326 428409 -139888356 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 430048 430187 -139886578 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 430802 430936 -139885829 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 431001 431045 -139885720 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 431247 431485 -139885280 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 432820 433057 -139883708 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 433064 433281 -139883484 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 433801 434029 -139882736 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 434035 434166 -139882599 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 434927 435237 -139881528 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 436267 436652 -139880113 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 436784 436867 -139879898 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 438055 438351 -139878414 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 438429 438704 -139878061 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 439523 439826 -139876939 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 440806 440985 -139875780 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 443987 444256 -139872509 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 444459 445256 -139871509 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 445256 445399 -139871366 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 445399 445695 -139871070 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 445695 445936 -139870829 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 445936 446057 -139870708 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 446161 446227 -139870538 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 446234 446542 -139870223 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 446542 447278 -139869487 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 448684 448785 -139867980 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 449151 449178 -139867587 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 449443 449618 -139867147 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 450210 450246 -139866519 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 450246 450549 -139866216 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 450549 450704 -139866061 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 452808 453096 -139863669 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 455911 455964 -139860801 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 459117 459224 -139857541 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 459868 460427 -139856338 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 462624 463456 -139853309 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 463544 463681 -139853084 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 463725 463908 -139852857 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 466214 466341 -139850424 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 466347 466617 -139850148 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 466811 467093 -139849672 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 467649 467955 -139848810 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 468312 468389 -139848376 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 469389 469485 -139847280 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 470597 470721 -139846044 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 472578 472861 -139843904 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 475783 476089 -139840676 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 476948 476992 -139839773 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 477862 478055 -139838710 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 478347 478504 -139838261 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 478570 478752 -139838013 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 478862 479044 -139837721 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 478923 479098 -139837667 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 479220 479402 -139837363 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 479343 479509 -139837256 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 479521 479696 -139837069 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 479665 479828 -139836937 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 481028 481368 -139835397 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 481542 481761 -139835004 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 484814 484870 -139831895 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 486448 486532 -139830233 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 487262 487425 -139829340 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 487968 488761 -139828004 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 490274 490580 -139826185 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 491560 491703 -139825062 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 492231 492276 -139824489 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 492648 492755 -139824010 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 492926 493042 -139823723 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 494466 494545 -139822220 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 494775 494993 -139821772 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 495383 495681 -139821084 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 496102 496552 -139820213 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 497696 497756 -139819009 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 500858 501312 -139815453 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 501546 501805 -139814960 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 502349 502485 -139814280 + AluSg/x SINE Alu 175 309 -1 272 164 119 0 chr10 502873 502952 -139813813 - MLT1D LTR MaLR 0 505 464 228 274 71 0 chr10 503033 503146 -139813619 + (CCCCAG)n Simple_repeat Simple_repeat 4 124 0 216 0 0 0 chr10 504979 505003 -139811762 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 746 146 132 6 chr10 506756 506961 -139809804 - MER61D LTR ERV1 -216 218 1 245 215 11 0 chr10 506973 507066 -139809699 + (TATAG)n Simple_repeat Simple_repeat 1 94 0 2115 122 3 3 chr10 508440 508752 -139808013 - AluSx SINE Alu 0 312 1 953 238 36 0 chr10 509815 510038 -139806727 - MER8 DNA MER2_type 0 239 9 351 310 0 26 chr10 516711 516824 -139799941 - HAL1b LINE L1 -863 485 376 2302 78 3 3 chr10 518379 518685 -139798080 - AluY SINE Alu -5 306 1 1934 107 7 52 chr10 518687 518996 -139797769 - AluSx SINE Alu -17 295 1 276 254 82 45 chr10 519546 519680 -139797085 + MER5A DNA MER1_type 51 189 0 1554 142 38 11 chr10 519871 520138 -139796627 - AluJo SINE Alu -6 306 33 431 345 0 0 chr10 521162 521339 -139795426 + C-rich Low_complexity Low_complexity 2 178 0 192 305 105 11 chr10 522105 522200 -139794565 + MIR SINE MIR 68 171 -91 1668 188 47 9 chr10 524240 524580 -139792185 + MLT1A1 LTR MaLR 13 365 0 294 236 0 42 chr10 524587 524659 -139792106 + MLT1A1 LTR MaLR 297 365 0 283 250 0 42 chr10 524666 524738 -139792027 + MLT1A1 LTR MaLR 297 365 0 291 307 24 8 chr10 525494 525621 -139791144 + L1MC4 LINE L1 7914 8042 0 1395 127 5 5 chr10 527136 527348 -139789417 - AluSq SINE Alu 0 313 102 29 28 0 0 chr10 530682 530718 -139786047 + AT_rich Low_complexity Low_complexity 1 36 0 234 343 0 0 chr10 531809 531882 -139784883 - MIR3 SINE MIR -12 196 124 240 167 179 12 chr10 533010 533094 -139783671 + MER20 DNA MER1_type 67 164 -55 594 234 60 43 chr10 533480 533664 -139783101 - LTR55 LTR ERV -361 187 1 266 316 105 7 chr10 533735 533887 -139782878 + MIR SINE MIR 51 217 -45 247 265 0 33 chr10 538176 538457 -139778308 + CT-rich Low_complexity Low_complexity 1 271 0 216 324 29 0 chr10 539040 539108 -139777657 + L2 LINE L2 3195 3264 -8 182 211 26 0 chr10 540156 540194 -139776571 - L3b LINE CR1 -123 1460 1422 187 354 152 15 chr10 540231 540429 -139776336 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 544211 544356 -139772409 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 544392 544557 -139772208 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 544590 544651 -139772114 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 545200 545377 -139771388 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 246 35 0 chr10 547218 547275 -139769490 + (AATAG)n Simple_repeat Simple_repeat 1 59 0 24607 92 22 3 chr10 547424 551322 -139765443 - L1P3 LINE L1 -673 5499 1527 298 325 62 19 chr10 552571 552780 -139763985 + Charlie1 DNA MER1_type 20 237 -2524 * 357 273 94 0 chr10 552766 552894 -139763871 + Charlie1 DNA MER1_type 2622 2761 0 1586 176 20 3 chr10 554064 554359 -139762406 + AluJo SINE Alu 1 300 -12 497 348 86 0 chr10 554506 554693 -139762072 + L1M4 LINE L1 2946 3148 -2998 551 252 32 13 chr10 554706 554861 -139761904 + L1MCa LINE L1 19 176 -6250 * 569 197 61 0 chr10 554859 554991 -139761774 + L1MCa LINE L1 988 1127 -5299 287 208 69 0 chr10 554978 555050 -139761715 + L1MCa LINE L1 1857 1933 -4493 * 242 296 82 10 chr10 555744 555842 -139760923 - MIR SINE MIR -65 197 93 387 216 0 34 chr10 559247 559335 -139757430 - Tigger5 DNA MER2_type -3 2320 2236 232 260 41 27 chr10 559393 559466 -139757299 - Tigger5 DNA MER2_type -2249 74 1 368 201 88 0 chr10 560276 560435 -139756330 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 560346 560534 -139756231 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 561933 562040 -139754725 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 562065 562235 -139754530 + (CA)n Simple_repeat Simple_repeat 1 170 0 423 316 60 57 chr10 563008 563290 -139753475 - L1MC/D LINE L1 -2222 5586 5304 2095 120 11 0 chr10 564156 564440 -139752325 + AluSx SINE Alu 1 287 -25 751 325 21 23 chr10 564510 564894 -139751871 + L1MEc LINE L1 1627 2009 -4387 350 365 72 51 chr10 564958 565251 -139751514 + L1MDa LINE L1 51 349 -6191 343 244 194 49 chr10 565411 565735 -139751030 - L1M2 LINE L1 -5723 1126 756 24 0 0 0 chr10 566540 566564 -139750201 + AT_rich Low_complexity Low_complexity 1 24 0 2465 87 0 3 chr10 568718 569029 -139747736 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 569029 569076 -139747689 + (TA)n Simple_repeat Simple_repeat 1 47 0 180 0 0 0 chr10 569520 569540 -139747225 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 569549 569846 -139746919 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 574087 574379 -139742386 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 574379 574415 -139742350 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 580622 580926 -139735839 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 580967 581004 -139735761 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 581013 581080 -139735685 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 581080 581379 -139735386 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 581379 581772 -139734993 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 582558 582712 -139734053 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 582932 583125 -139733640 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 583133 583274 -139733491 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 583289 584339 -139732426 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 584339 584508 -139732257 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 584508 584808 -139731957 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 584808 585368 -139731397 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 585368 585475 -139731290 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 585812 586042 -139730723 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 586077 586387 -139730378 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 586591 586852 -139729913 + HAL1 LINE L1 1860 2243 -264 972 121 0 0 chr10 586852 586984 -139729781 + FLAM_C SINE Alu 1 132 -1 429 210 89 85 chr10 586984 587088 -139729677 + HAL1 LINE L1 2243 2345 -162 2565 84 0 0 chr10 587091 587402 -139729363 + AluY SINE Alu 1 311 0 303 254 25 82 chr10 587695 587817 -139728948 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 587865 588099 -139728666 - L1ME2 LINE L1 -214 5939 5682 705 268 59 74 chr10 588218 588878 -139727887 - L1ME2 LINE L1 -1317 4812 4163 3506 226 121 15 chr10 588881 589905 -139726860 - MSTD-int LTR MaLR -601 1134 2 641 114 5 0 chr10 589915 590019 -139726746 - ALR/Alpha Satellite centromeric -20 151 47 1571 149 221 0 chr10 590019 590327 -139726438 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 590529 590580 -139726185 + A-rich Low_complexity Low_complexity 2 50 0 1262 283 78 60 chr10 590777 591060 -139725705 - L1ME2 LINE L1 -2406 3723 3447 929 73 0 22 chr10 591060 591196 -139725569 - L1PA4 LINE L1 0 6155 6023 1262 283 78 60 chr10 591196 592313 -139724452 - L1ME2 LINE L1 -2682 3447 2297 471 268 63 123 chr10 592326 592471 -139724294 - L1ME2 LINE L1 -5073 1046 894 1579 186 0 11 chr10 592471 592735 -139724030 - AluJo SINE Alu -51 261 1 471 268 63 123 chr10 592735 592940 -139723825 - L1ME2 LINE L1 -5225 894 717 306 295 72 66 chr10 593125 593291 -139723474 - L1ME2 LINE L1 -5508 611 445 1389 159 4 35 chr10 593669 593816 -139722949 + AluJb SINE Alu 1 140 -172 2563 100 22 14 chr10 593816 594177 -139722588 + THE1B LTR MaLR 1 364 0 1389 159 4 35 chr10 594177 594261 -139722504 + AluJb SINE Alu 140 225 -87 232 254 0 0 chr10 594261 594320 -139722445 + AluSg/x SINE Alu 178 236 -66 647 200 0 33 chr10 594354 594474 -139722291 + AluSg/x SINE Alu 173 288 -21 286 263 106 73 chr10 594832 595011 -139721754 - MIR3 SINE MIR -1 207 23 330 325 132 15 chr10 595461 595658 -139721107 - L1ME3A LINE L1 -28 6142 5923 906 127 0 0 chr10 595747 595873 -139720892 - FLAM_C SINE Alu -17 126 1 1075 294 54 43 chr10 595881 596740 -139720025 - L1ME3A LINE L1 -264 5906 5032 539 272 83 74 chr10 596788 597355 -139719410 + L1ME LINE L1 24 595 -5475 449 364 79 38 chr10 597504 597564 -139719201 - L1ME3A LINE L1 -1123 5023 4967 2109 123 13 7 chr10 597564 597874 -139718891 - AluSx SINE Alu 0 312 1 449 364 79 38 chr10 597874 598258 -139718507 - L1ME3A LINE L1 -1179 4967 4561 1402 307 74 33 chr10 598323 598474 -139718291 - L1ME3A LINE L1 -1611 4535 4392 2156 124 0 0 chr10 598474 598765 -139718000 - AluSc SINE Alu -18 291 1 1402 307 74 33 chr10 598765 599544 -139717221 - L1ME3A LINE L1 -1754 4392 3567 2155 109 0 0 chr10 601407 601682 -139715083 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 601685 601705 -139715060 + (TAA)n Simple_repeat Simple_repeat 2 21 0 186 196 59 0 chr10 602956 603007 -139713758 + L2 LINE L2 3255 3308 -5 23 0 0 0 chr10 603192 603215 -139713550 + AT_rich Low_complexity Low_complexity 1 23 0 458 239 43 0 chr10 603482 603599 -139713166 + L1 LINE L1 5113 5234 -912 * 2763 23 0 0 chr10 603599 603900 -139712865 - AluY SINE Alu -10 301 1 763 185 53 21 chr10 603900 604079 -139712686 + L1MA9 LINE L1 6125 6312 0 311 315 19 9 chr10 604248 604356 -139712409 - L1ME LINE L1 -382 5739 5631 403 321 46 8 chr10 605063 605194 -139711571 - L2 LINE L2 -1 3271 3136 333 283 20 30 chr10 606263 606362 -139710403 - L2 LINE L2 -1 3271 3174 1999 104 11 11 chr10 606631 606761 -139710004 + AluSq SINE Alu 4 281 -32 2168 137 12 41 chr10 606761 607213 -139709552 + AluSp SINE Alu 1 309 -4 194 0 39 0 chr10 607213 607239 -139709526 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 240 345 0 47 chr10 608554 608725 -139708040 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 608740 608916 -139707849 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 2010 138 6 3 chr10 610073 610384 -139706381 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 610786 610959 -139705806 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 611045 611218 -139705547 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 232 347 13 0 chr10 611278 611353 -139705412 - MER91B DNA MER1_type -60 130 55 2406 75 0 0 chr10 612094 612399 -139704366 - AluSc SINE Alu -4 305 1 1801 195 7 0 chr10 613381 613688 -139703077 + AluJo SINE Alu 1 309 -3 2136 88 15 0 chr10 613809 614176 -139702589 - AluSx SINE Alu 0 375 5 262 241 37 0 chr10 614332 614386 -139702379 + MER5A DNA MER1_type 109 164 -25 230 257 40 0 chr10 616091 616165 -139700600 + LTR16C LTR ERVL 408 484 -7 729 224 52 5 chr10 619024 619216 -139697549 + L1MB3 LINE L1 5470 5670 -501 1618 184 14 20 chr10 619216 619367 -139697398 - AluJo SINE Alu -16 296 146 2733 95 16 0 chr10 619367 619736 -139697029 + THE1C LTR MaLR 1 375 0 1618 184 14 20 chr10 619736 619877 -139696888 - AluJo SINE Alu -166 146 6 1715 211 136 0 chr10 619877 620332 -139696433 + L1MB3 LINE L1 5657 6173 -10 884 181 6 6 chr10 623947 624107 -139692658 - AluJb SINE Alu -22 290 131 326 300 154 11 chr10 624692 624952 -139691813 + MLT1A2 LTR MaLR 26 322 -52 2424 75 0 3 chr10 625211 625518 -139691247 - AluSx SINE Alu -4 308 3 1231 144 229 0 chr10 628171 628407 -139688358 + AluJo SINE Alu 1 290 -22 322 317 0 0 chr10 629246 629639 -139687126 + (TG)n Simple_repeat Simple_repeat 1 393 0 1113 166 0 10 chr10 630183 630376 -139686389 + AluJb SINE Alu 116 306 -6 307 222 218 56 chr10 631052 631286 -139685479 + L1M4 LINE L1 4297 4568 -1578 463 264 88 0 chr10 631925 632073 -139684692 + L1M4 LINE L1 4552 4712 -1434 6084 138 36 12 chr10 632074 632761 -139684004 + L1P4 LINE L1 1190 1916 -4933 2121 181 89 26 chr10 632761 633220 -139683545 + LTR2B LTR ERV1 3 490 0 6084 138 36 12 chr10 633220 633659 -139683106 + L1P4 LINE L1 1916 2343 -4506 2574 116 6 3 chr10 633660 634023 -139682742 + THE1B LTR MaLR 1 364 0 4692 106 83 60 chr10 634023 634938 -139681827 + THE1B-int LTR MaLR 1 936 -644 3902 122 47 56 chr10 634907 635614 -139681151 - THE1B-int LTR MaLR -833 747 46 * 2061 120 3 20 chr10 635614 635915 -139680850 - AluSq SINE Alu -17 296 1 3902 122 47 56 chr10 635915 635960 -139680805 - THE1B-int LTR MaLR -1534 46 2 2516 107 19 25 chr10 635961 636326 -139680439 - THE1B LTR MaLR 0 364 2 4836 241 106 8 chr10 636334 636391 -139680374 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 636391 636436 -139680329 + (CA)n Simple_repeat Simple_repeat 2 46 0 4836 241 106 8 chr10 636436 638217 -139678548 + L1P4 LINE L1 2398 4371 -2478 3716 160 28 58 chr10 638216 638430 -139678335 + L1P4 LINE L1 5036 5255 -1614 * 2273 82 0 16 chr10 638430 638735 -139678030 - AluY SINE Alu -10 301 2 3716 160 28 58 chr10 638735 639698 -139677067 + L1P4 LINE L1 5255 6163 -706 1779 175 0 7 chr10 639698 639990 -139676775 - AluJo SINE Alu -22 290 1 3716 160 28 58 chr10 639990 640079 -139676686 + L1P4 LINE L1 6163 6253 -616 235 227 82 27 chr10 640446 640556 -139676209 + Charlie5 DNA MER1_type 2402 2517 -95 237 263 53 0 chr10 641702 641778 -139674987 + MER116 DNA Mariner 1 80 0 184 227 23 0 chr10 642394 642438 -139674327 + L2 LINE L2 1877 1921 -1393 228 252 151 58 chr10 643877 644016 -139672749 + MLT1L LTR MaLR 41 192 -423 421 314 76 22 chr10 644546 644833 -139671932 + L1MEc LINE L1 2219 2525 -3690 335 321 28 0 chr10 645926 646032 -139670733 - L2 LINE L2 -10 3262 3154 347 380 20 64 chr10 646102 646352 -139670413 + L1M4 LINE L1 4777 5015 -1131 474 189 0 0 chr10 646677 646788 -139669977 + GA-rich Low_complexity Low_complexity 3 113 0 312 277 127 11 chr10 647591 647858 -139668907 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 648308 648329 -139668436 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 650589 650629 -139666136 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 651789 651812 -139664953 + GC_rich Low_complexity Low_complexity 1 23 0 2104 114 0 7 chr10 652599 652898 -139663867 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 652902 652936 -139663829 + (TTA)n Simple_repeat Simple_repeat 1 33 0 311 286 36 19 chr10 654334 654484 -139662281 - MIR SINE MIR -36 172 17 2140 119 0 0 chr10 654744 655037 -139661728 + AluSx SINE Alu 1 293 -19 195 374 24 0 chr10 656417 656500 -139660265 + MIR SINE MIR 178 262 0 24 0 0 0 chr10 657258 657282 -139659483 + AT_rich Low_complexity Low_complexity 1 24 0 493 293 55 6 chr10 660533 660697 -139656068 + ERVL LTR ERVL 3223 3394 -2370 291 288 159 6 chr10 662244 662414 -139654351 + LTR50 LTR ERVL 14 209 -586 1757 183 0 0 chr10 663007 663322 -139653443 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 663798 663824 -139652941 + AT_rich Low_complexity Low_complexity 1 26 0 2355 71 0 7 chr10 665789 666086 -139650679 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 670073 670094 -139646671 + (T)n Simple_repeat Simple_repeat 1 21 0 348 247 113 20 chr10 670124 670274 -139646491 + L1ME1 LINE L1 36 199 -6197 1624 208 124 47 chr10 670346 670828 -139645937 + L1ME1 LINE L1 469 1007 -5389 2623 58 0 0 chr10 670828 671139 -139645626 - AluY SINE Alu 0 311 1 1624 208 124 47 chr10 671139 671253 -139645512 + L1ME1 LINE L1 1007 1111 -5285 1292 242 138 23 chr10 671335 671848 -139644917 + L1ME1 LINE L1 1408 1979 -4417 1386 104 0 45 chr10 671942 672164 -139644601 + MER30 DNA MER1_type 2 213 -17 1260 198 87 43 chr10 672174 672406 -139644359 + L1ME1 LINE L1 2057 2277 -4119 2295 105 3 0 chr10 672406 672710 -139644055 + AluSc SINE Alu 1 305 -4 1260 198 87 43 chr10 672710 672916 -139643849 + L1ME1 LINE L1 2277 2514 -3882 386 22 0 0 chr10 673665 673711 -139643054 + AluSg SINE Alu 1 46 -256 1132 79 0 0 chr10 673711 673851 -139642914 + AluSg/x SINE Alu 158 297 -15 1895 108 0 0 chr10 674495 674745 -139642020 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 674915 674964 -139641801 + AT_rich Low_complexity Low_complexity 1 49 0 415 292 60 0 chr10 675848 676016 -139640749 + L1ME1 LINE L1 3337 3514 -2701 947 292 73 10 chr10 676055 676463 -139640302 + L1ME1 LINE L1 4492 4925 -1290 704 258 55 19 chr10 676509 676780 -139639985 + L1ME1 LINE L1 5026 5306 -909 6119 181 34 6 chr10 676831 678232 -139638533 + L1MC1 LINE L1 4885 6328 -5 2217 233 110 31 chr10 678243 679053 -139637712 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 679260 679291 -139637474 + AT_rich Low_complexity Low_complexity 1 31 0 1939 152 3 7 chr10 679665 679961 -139636804 + AluSx SINE Alu 1 295 -17 2087 132 3 3 chr10 680995 681291 -139635474 - AluSc SINE Alu -13 296 1 2360 103 0 0 chr10 682212 682514 -139634251 + AluSq SINE Alu 1 302 -11 331 303 114 56 chr10 684975 685388 -139631377 - L2 LINE L2 -9 3263 2827 290 319 184 23 chr10 685598 685902 -139630863 - L2 LINE L2 -1155 2159 1807 604 308 81 39 chr10 686166 686313 -139630452 + L1MC1 LINE L1 40 179 -6217 2317 80 0 39 chr10 686313 686624 -139630141 - AluSg SINE Alu -11 299 1 604 308 81 39 chr10 686624 686995 -139629770 + L1MC1 LINE L1 179 580 -5816 1634 255 103 7 chr10 686997 687581 -139629184 + L1MC1 LINE L1 607 1246 -5150 549 332 40 12 chr10 687618 687940 -139628825 + L1MC1 LINE L1 1760 2090 -4306 1456 175 183 99 chr10 688012 688380 -139628385 + L1MD3 LINE L1 6701 7036 -959 255 253 0 13 chr10 688380 688455 -139628310 + MLT1F1 LTR MaLR 52 125 -442 1456 175 183 99 chr10 688455 688978 -139627787 + L1MD3 LINE L1 7036 7983 -12 6053 254 108 29 chr10 688982 689976 -139626789 + L1MC1 LINE L1 2179 3094 -3121 2228 114 0 0 chr10 689976 690275 -139626490 - AluSx SINE Alu -9 303 5 6053 254 108 29 chr10 690275 690582 -139626183 + L1MC1 LINE L1 3094 3376 -2839 1752 164 4 4 chr10 690582 690857 -139625908 + AluJb SINE Alu 5 279 -33 6053 254 108 29 chr10 690857 691991 -139624774 + L1MC1 LINE L1 3376 4853 -1362 13341 144 49 15 chr10 691991 692197 -139624568 - Tigger1 DNA MER2_type 0 2418 2220 2016 158 0 0 chr10 692197 692500 -139624265 + AluSx SINE Alu 1 303 -9 13341 144 49 15 chr10 692500 694629 -139622136 - Tigger1 DNA MER2_type -198 2220 4 6053 254 108 29 chr10 694629 694916 -139621849 + L1MC1 LINE L1 4853 5116 -1099 345 239 147 0 chr10 695032 695141 -139621624 + L1MC1 LINE L1 5323 5447 -2407 4869 194 49 12 chr10 695151 696203 -139620562 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 696221 696268 -139620497 + MER39B LTR ERV1 1 47 -606 1175 133 133 18 chr10 696280 696506 -139620259 + LTR49-int LTR ERV1 375 626 -5705 * 1519 167 141 95 chr10 696504 696988 -139619777 + LTR49-int LTR ERV1 751 1256 -5075 2124 216 62 4 chr10 696990 697665 -139619100 + L1M3 LINE L1 4788 5491 -692 987 118 0 0 chr10 697665 697800 -139618965 + AluSq/x SINE Alu 1 135 -177 2059 118 28 0 chr10 697800 698087 -139618678 + AluSg SINE Alu 1 295 -15 935 141 0 25 chr10 698088 698251 -139618514 + L1M3 LINE L1 5483 5641 -542 4660 152 6 17 chr10 698251 699020 -139617745 + L1MC1 LINE L1 5632 6402 0 1655 234 58 29 chr10 699021 699537 -139617228 + L1ME2 LINE L1 5390 5920 -244 238 200 83 0 chr10 699537 699597 -139617168 + FRAM/FAM SINE Alu 15 79 -87 2385 82 0 0 chr10 699670 699964 -139616801 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 701052 701077 -139615688 + (A)n Simple_repeat Simple_repeat 1 25 0 2032 97 8 0 chr10 701313 701580 -139615185 + AluY SINE Alu 40 308 -3 2463 43 3 23 chr10 702022 702324 -139614441 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 702472 702493 -139614272 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 703213 703234 -139613531 + AT_rich Low_complexity Low_complexity 1 21 0 2235 103 7 0 chr10 703467 703769 -139612996 + AluSx SINE Alu 1 304 -8 264 281 94 41 chr10 704175 704346 -139612419 + L2 LINE L2 2723 2902 -412 21 36 0 0 chr10 705814 705842 -139610923 + AT_rich Low_complexity Low_complexity 1 28 0 309 295 116 0 chr10 706042 706171 -139610594 - MIR SINE MIR -27 235 92 2270 123 0 3 chr10 706374 706682 -139610083 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 707172 707193 -139609572 + AT_rich Low_complexity Low_complexity 1 21 0 1805 116 27 62 chr10 708401 708700 -139608065 + AluSx SINE Alu 1 288 -24 424 0 0 0 chr10 708700 708747 -139608018 + (TAA)n Simple_repeat Simple_repeat 2 180 0 180 339 18 18 chr10 709271 709327 -139607438 + L3 LINE CR1 570 625 -952 258 326 11 0 chr10 712591 712683 -139604082 + L1MC4 LINE L1 7826 7918 -124 2029 98 0 11 chr10 712745 713055 -139603710 + AluSx SINE Alu 1 307 0 281 229 96 108 chr10 713654 713820 -139602945 - MIR SINE MIR 0 262 99 570 262 66 33 chr10 713959 714142 -139602623 + MIR SINE MIR 10 198 -64 182 209 68 122 chr10 714134 714282 -139602483 + L2 LINE L2 2764 2903 -411 * 675 180 34 4 chr10 714332 714481 -139602284 - MSTC LTR MaLR -9 419 271 674 186 6 51 chr10 714488 714644 -139602121 - MSTC LTR MaLR -247 149 1 3744 211 48 60 chr10 714655 714899 -139601866 - MSTC-int LTR MaLR -13 1722 1476 2065 112 10 7 chr10 714899 715204 -139601561 + AluSp SINE Alu 1 306 -7 3744 211 48 60 chr10 715204 715983 -139600782 - MSTC-int LTR MaLR -259 1476 712 989 186 0 0 chr10 716030 716191 -139600574 + FRAM SINE Alu 1 161 -5 807 164 21 21 chr10 716300 716440 -139600325 + MIR SINE MIR 22 161 -101 634 249 202 27 chr10 716565 717150 -139599615 - L2 LINE L2 -15 3298 2601 353 276 19 0 chr10 717344 717449 -139599316 + L1ME3A LINE L1 6048 6154 -16 1515 144 114 4 chr10 718292 718563 -139598202 - AluJo SINE Alu -1 301 1 2414 73 0 0 chr10 718568 718869 -139597896 - AluSq SINE Alu -12 301 1 732 183 0 7 chr10 719576 719713 -139597052 + AluSg/x SINE Alu 177 312 0 282 162 108 77 chr10 720106 720238 -139596527 - MLT1D LTR MaLR 0 505 464 377 262 49 12 chr10 720266 720430 -139596335 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 548 234 36 12 chr10 720436 720603 -139596162 - MLT1D LTR MaLR -263 242 72 406 216 0 34 chr10 723906 723994 -139592771 - Tigger5 DNA MER2_type -3 2320 2236 249 260 41 27 chr10 724052 724125 -139592640 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 724489 724622 -139592143 + (CA)n Simple_repeat Simple_repeat 2 135 0 1664 246 90 11 chr10 725915 726481 -139590284 + L1MA4 LINE L1 5690 6300 0 692 112 9 0 chr10 726535 726642 -139590123 + MSTA LTR MaLR 2 109 -319 370 70 18 0 chr10 726646 726703 -139590062 + MSTA LTR MaLR 52 109 -319 370 70 18 0 chr10 726707 726764 -139590001 + MSTA LTR MaLR 52 109 -319 370 103 20 13 chr10 726755 726832 -139589933 + MSTA LTR MaLR 45 119 -256 302 123 18 0 chr10 726829 726886 -139589879 + MSTA LTR MaLR 52 109 -319 * 325 98 0 0 chr10 726890 726941 -139589824 + MSTA LTR MaLR 52 102 -326 1682 138 163 9 chr10 726943 727268 -139589497 + MSTA LTR MaLR 45 419 -9 1934 105 17 3 chr10 727905 728199 -139588566 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 731501 731538 -139585227 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 273 201 19 chr10 733161 733315 -139583450 + MIR SINE MIR 6 187 -75 775 237 103 9 chr10 735118 735342 -139581423 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 738151 738304 -139578461 + GA-rich Low_complexity Low_complexity 1 152 0 1289 277 58 16 chr10 739212 739803 -139576962 + L1ME LINE L1 2112 2762 -3890 690 155 66 94 chr10 739903 740084 -139576681 + MLT2B2 LTR ERVL 340 515 0 1778 165 42 22 chr10 740086 740443 -139576322 + L1MB3 LINE L1 5813 6176 -7 26 0 0 0 chr10 740443 740469 -139576296 + AT_rich Low_complexity Low_complexity 1 26 0 413 301 98 33 chr10 740744 741080 -139575685 + L1ME LINE L1 4448 4805 -1735 * 2187 136 21 38 chr10 741063 741251 -139575514 + L1MA7 LINE L1 5175 5365 -926 2049 129 7 0 chr10 741251 741545 -139575220 + AluSx SINE Alu 1 296 -16 2187 136 21 38 chr10 741545 741833 -139574932 + L1MA7 LINE L1 5365 5648 -643 459 228 0 0 chr10 741880 741959 -139574806 - Tigger5 DNA MER2_type -2244 79 1 3513 167 9 36 chr10 741964 742623 -139574142 + L1MA7 LINE L1 5650 6290 -1 1346 199 21 28 chr10 742636 742923 -139573842 + AluJo SINE Alu 3 287 -25 34 72 0 0 chr10 743141 743210 -139573555 + AT_rich Low_complexity Low_complexity 1 69 0 480 314 54 4 chr10 743351 743612 -139573153 + L1ME LINE L1 4814 5087 -1453 301 196 137 20 chr10 744232 744334 -139572431 + L1ME LINE L1 5142 5255 -1285 2419 74 0 0 chr10 744439 744750 -139572015 + AluY SINE Alu 1 311 0 21 0 0 0 chr10 745583 745604 -139571161 + AT_rich Low_complexity Low_complexity 1 21 0 15534 175 44 18 chr10 745615 750331 -139566434 + L1M1 LINE L1 3 4933 -2072 2142 116 0 0 chr10 750331 750624 -139566141 + AluSx SINE Alu 1 293 -19 15534 175 44 18 chr10 750624 752018 -139564747 + L1M1 LINE L1 4933 6289 -716 2684 137 43 2 chr10 752014 752299 -139564466 + L1MA4A LINE L1 5494 5805 -498 * 285 29 0 0 chr10 752299 752333 -139564432 + (CA)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 752333 752493 -139564272 + L1MA4A LINE L1 5805 5957 -346 737 168 74 62 chr10 752498 752711 -139564054 + L1MA4A LINE L1 6037 6239 -52 354 145 0 0 chr10 753523 753592 -139563173 + L1MA4A LINE L1 6230 6298 -5 293 233 128 8 chr10 753667 753800 -139562965 + L1ME4a LINE L1 5973 6121 0 * 1721 286 113 38 chr10 753794 755152 -139561613 + L1MEc LINE L1 9 1468 -4928 1969 130 31 0 chr10 755152 755444 -139561321 + AluSx SINE Alu 1 301 -11 918 214 104 6 chr10 755476 755836 -139560929 + L1ME LINE L1 5543 5931 -629 2038 118 0 0 chr10 755984 756271 -139560494 + AluSx SINE Alu 1 287 -25 1648 176 91 18 chr10 756290 756620 -139560145 + MLT1A1 LTR MaLR 12 365 0 311 317 154 48 chr10 756651 756859 -139559906 + L1MC4a LINE L1 6542 6771 -1037 251 273 20 10 chr10 757052 757151 -139559614 + L1MC4 LINE L1 6810 6909 -1133 442 271 97 20 chr10 757321 757568 -139559197 + L1MC5 LINE L1 6955 7220 -741 2182 119 9 0 chr10 758229 758557 -139558208 + L1PA10 LINE L1 5827 6157 -11 642 189 104 25 chr10 759255 759456 -139557309 + Charlie5 DNA MER1_type 2380 2596 -16 2173 109 3 0 chr10 759706 760009 -139556756 - AluSp SINE Alu -9 304 1 307 336 134 16 chr10 760467 760788 -139555977 - L1M2 LINE L1 -5717 1132 774 1878 125 10 14 chr10 761378 761674 -139555091 + AluSx SINE Alu 1 295 -17 236 140 88 35 chr10 761747 761804 -139554961 - L1 LINE L1 -3326 2820 2761 563 197 21 14 chr10 763088 763230 -139553535 + L1MB8 LINE L1 6027 6169 -9 1703 94 0 0 chr10 763364 763588 -139553177 - AluY SINE Alu -15 296 73 2101 103 6 6 chr10 764205 764516 -139552249 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 764535 764581 -139552184 + AT_rich Low_complexity Low_complexity 1 46 0 887 118 0 37 chr10 764625 764761 -139552004 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 764835 764881 -139551884 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 765139 765174 -139551591 + AT_rich Low_complexity Low_complexity 1 35 0 1493 207 119 14 chr10 766051 766481 -139550284 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 766783 766805 -139549960 + AT_rich Low_complexity Low_complexity 1 22 0 4640 167 48 45 chr10 767047 767090 -139549675 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 767090 767112 -139549653 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4640 167 48 45 chr10 767112 767782 -139548983 + L1MA9 LINE L1 5295 5961 -351 1886 122 11 0 chr10 767782 768060 -139548705 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 768060 768084 -139548681 + (CA)n Simple_repeat Simple_repeat 1 24 0 4640 167 48 45 chr10 768084 768387 -139548378 + L1MA9 LINE L1 5960 6275 -37 1883 148 6 3 chr10 768401 768712 -139548053 + AluSx SINE Alu 1 312 0 1829 131 7 7 chr10 768715 769006 -139547759 + AluSx SINE Alu 1 291 -21 1961 133 7 7 chr10 769011 769319 -139547446 + AluSx SINE Alu 1 308 -4 3874 146 63 40 chr10 769449 769732 -139547033 - MER6 DNA MER2_type -75 790 515 1724 171 7 0 chr10 769732 770041 -139546724 + AluJb SINE Alu 1 311 -1 3874 146 63 40 chr10 770041 770522 -139546243 - MER6 DNA MER2_type -350 515 9 1627 109 40 8 chr10 770625 770873 -139545892 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 771637 771661 -139545104 + (TTA)n Simple_repeat Simple_repeat 1 24 0 554 239 241 52 chr10 772021 772593 -139544172 + L1MC5 LINE L1 7246 7925 -36 2418 55 0 0 chr10 773639 773932 -139542833 - AluY SINE Alu -17 294 2 1859 143 0 19 chr10 773997 774311 -139542454 - AluSx SINE Alu -4 308 1 695 276 43 0 chr10 774572 774782 -139541983 - L1MD3 LINE L1 -170 7825 7607 304 333 87 0 chr10 774969 775095 -139541670 + L1MC5 LINE L1 6973 7109 -852 499 239 81 125 chr10 775322 775988 -139540777 + L1MC5 LINE L1 7273 7909 -52 1874 119 3 7 chr10 775998 776334 -139540431 + AluSx SINE Alu 1 335 0 1312 142 123 26 chr10 776525 776793 -139539972 + AluSx SINE Alu 14 307 -5 349 229 132 62 chr10 776825 776969 -139539796 + L1ME4a LINE L1 5852 6005 -116 21 36 0 0 chr10 777007 777035 -139539730 + AT_rich Low_complexity Low_complexity 1 28 0 601 232 20 33 chr10 777263 777414 -139539351 + Charlie1 DNA MER1_type 2 150 -2611 * 1465 187 68 64 chr10 777398 777885 -139538880 + Charlie1 DNA MER1_type 2272 2760 -1 3708 202 18 63 chr10 777961 778801 -139537964 + L1ME LINE L1 4499 5250 -914 2203 117 0 0 chr10 778801 779110 -139537655 + AluSx SINE Alu 1 309 -3 3708 202 18 63 chr10 779110 779586 -139537179 + L1ME LINE L1 5250 5746 -418 205 321 199 0 chr10 779817 779948 -139536817 - MIR SINE MIR -34 228 72 477 103 15 0 chr10 781160 781228 -139535537 + AluS SINE Alu 2 70 -243 1668 158 34 10 chr10 781430 781722 -139535043 + AluJb SINE Alu 5 303 -9 1776 99 19 83 chr10 782924 783237 -139533528 - AluSx SINE Alu 0 312 20 225 259 71 24 chr10 783354 783439 -139533326 - L2 LINE L2 -3 3310 3222 1910 121 3 16 chr10 783649 783954 -139532811 + AluSq SINE Alu 1 301 -12 1946 237 89 60 chr10 784072 784252 -139532513 + L1MC4 LINE L1 6993 7166 -876 2121 126 0 0 chr10 784252 784554 -139532211 - AluJb SINE Alu -10 302 1 1946 237 89 60 chr10 784554 785073 -139531692 + L1MC4 LINE L1 7166 7668 -374 1989 105 3 7 chr10 785073 785395 -139531370 - AluSx SINE Alu 0 312 3 1946 237 89 60 chr10 785395 785457 -139531308 + L1MC4 LINE L1 7668 7727 -315 2362 65 0 10 chr10 785457 785766 -139530999 - AluY SINE Alu -5 306 1 1946 237 89 60 chr10 785766 785908 -139530857 + L1MC4 LINE L1 7727 7925 -117 241 247 0 14 chr10 786048 786121 -139530644 + L1MC5 LINE L1 7706 7777 -184 2093 106 0 29 chr10 787027 787198 -139529567 - AluSx SINE Alu -10 302 142 2445 63 3 0 chr10 787198 787500 -139529265 - AluSp SINE Alu -8 305 3 2093 106 0 29 chr10 787500 787639 -139529126 - AluSx SINE Alu -170 142 1 371 143 0 0 chr10 787639 787695 -139529070 - AluSg/x SINE Alu -167 133 78 2074 76 7 28 chr10 788493 788806 -139527959 - AluSq SINE Alu 0 307 1 917 145 0 0 chr10 788921 789106 -139527659 - FRAM SINE Alu 0 40 1 335 228 43 54 chr10 789270 789362 -139527403 - L1ME LINE L1 -678 5443 5353 428 214 309 0 chr10 789960 790128 -139526637 + MLT1F1 LTR MaLR 189 408 -159 2174 118 0 0 chr10 790128 790432 -139526333 - AluSx SINE Alu -8 304 1 946 203 0 0 chr10 790604 790786 -139525979 - AluJb SINE Alu -1 311 130 26 50 0 0 chr10 792236 792276 -139524489 + AT_rich Low_complexity Low_complexity 1 40 0 1132 84 0 0 chr10 792287 792429 -139524336 + AluSq/x SINE Alu 1 142 -170 231 61 122 41 chr10 792574 792623 -139524142 - L1MC/D LINE L1 -668 5574 5522 * 258 186 36 0 chr10 792614 792684 -139524081 - L1M3 LINE L1 -587 5593 5522 1210 180 24 87 chr10 792685 792974 -139523791 - L1MC/D LINE L1 -659 5583 5357 1377 161 120 0 chr10 792974 793241 -139523524 - AluJo SINE Alu -13 299 1 1210 180 24 87 chr10 793241 793588 -139523177 - L1MC/D LINE L1 -885 5357 4990 * 1752 245 39 51 chr10 793571 794430 -139522335 - L1M3 LINE L1 -1397 4749 3951 2078 90 14 3 chr10 794432 794721 -139522044 + AluSx SINE Alu 1 292 -20 212 321 25 12 chr10 795035 795116 -139521649 + MIR3 SINE MIR 78 159 -49 1911 145 3 3 chr10 795287 795583 -139521182 - AluSx SINE Alu -16 296 1 2306 78 3 7 chr10 796029 796336 -139520429 - AluSp SINE Alu -7 306 1 2442 229 77 13 chr10 796619 796706 -139520059 - L1MD1 LINE L1 0 6242 6162 1736 106 4 4 chr10 796706 796960 -139519805 - AluSq SINE Alu -59 254 1 2442 229 77 13 chr10 796960 797550 -139519215 - L1MD1 LINE L1 -80 6162 5522 268 179 34 0 chr10 797606 797674 -139519091 - L1M3 LINE L1 -587 5593 5524 268 179 34 0 chr10 797671 797739 -139519026 - L1M3 LINE L1 -587 5593 5524 * 304 142 35 0 chr10 797736 797804 -139518961 - L1M3 LINE L1 -587 5593 5524 * 331 155 34 0 chr10 797801 797870 -139518895 - L1M4 LINE L1 -581 5593 5523 2269 46 23 29 chr10 800658 800964 -139515801 - AluY SINE Alu -7 304 1 2032 132 0 13 chr10 801472 801783 -139514982 - AluSx SINE Alu -5 307 1 22 0 0 0 chr10 801987 802009 -139514756 + AT_rich Low_complexity Low_complexity 1 22 0 1742 164 13 0 chr10 802109 802414 -139514351 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 803699 803881 -139512884 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 803899 804080 -139512685 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 804074 804255 -139512510 + CT-rich Low_complexity Low_complexity 2 180 0 * 1861 170 6 20 chr10 804354 804707 -139512058 + L1MC1 LINE L1 5798 6145 -188 2205 109 6 10 chr10 804743 805054 -139511711 + AluSx SINE Alu 2 311 -1 546 235 143 21 chr10 805145 805383 -139511382 + L1MCa LINE L1 31 297 -6129 680 85 21 0 chr10 805433 805527 -139511238 + L1MCa LINE L1 1780 1875 -4551 1111 89 19 0 chr10 805550 805707 -139511058 - MSTB1 LTR MaLR 0 432 273 297 127 36 0 chr10 805706 805761 -139511004 - MSTB1 LTR MaLR -103 329 273 * 281 143 36 0 chr10 805759 805815 -139510950 - MSTB1 LTR MaLR -102 330 273 * 316 107 36 0 chr10 805813 805869 -139510896 - MSTB1 LTR MaLR -102 330 273 260 132 38 0 chr10 805869 805922 -139510843 - MSTB1 LTR MaLR -104 328 274 1733 173 35 0 chr10 805922 806240 -139510525 - MSTB1 LTR MaLR -103 329 1 944 182 53 53 chr10 806245 806327 -139510438 - MLT1B LTR MaLR -163 227 146 2185 105 0 13 chr10 806327 806640 -139510125 + AluSp SINE Alu 1 309 -4 944 182 53 53 chr10 806640 806782 -139509983 - MLT1B LTR MaLR -243 147 3 195 288 17 0 chr10 806782 806841 -139509924 - L2 LINE L2 -1041 2273 2214 928 256 154 50 chr10 806855 807375 -139509390 + MLT1E1 LTR MaLR 69 642 -12 1083 201 247 25 chr10 807970 808294 -139508471 - MSTD LTR MaLR 0 396 1 2185 98 0 0 chr10 808391 808688 -139508077 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 810365 810412 -139506353 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 810496 810801 -139505964 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 811237 811824 -139504941 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 812087 812325 -139504440 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 812393 812488 -139504277 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 813164 813513 -139503252 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 813771 814086 -139502679 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 814519 814781 -139501984 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 815888 816048 -139500717 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 816174 816351 -139500414 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 816351 816651 -139500114 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 816651 816809 -139499956 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 817682 817974 -139498791 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 818761 818897 -139497868 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 819057 819179 -139497586 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 819638 819725 -139497040 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 821455 821722 -139495043 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 821725 821897 -139494868 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 821892 821951 -139494814 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 821962 822188 -139494577 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 822414 822566 -139494199 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 822710 822933 -139493832 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 823087 823426 -139493339 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 823447 823585 -139493180 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 823600 824012 -139492753 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 824012 824292 -139492473 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 824292 825731 -139491034 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 825733 825826 -139490939 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 825885 826188 -139490577 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 826427 826713 -139490052 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 826725 826749 -139490016 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 827676 827706 -139489059 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 827706 828099 -139488666 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 828099 828191 -139488574 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 828239 828268 -139488497 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 829038 829281 -139487484 + AluSg/x SINE Alu 74 307 0 245 340 65 22 chr10 829331 829508 -139487257 + MIR SINE MIR 10 193 -67 189 326 63 0 chr10 829672 829767 -139486998 + MIR SINE MIR 150 250 -12 196 295 67 19 chr10 830125 830230 -139486535 - L2 LINE L2 -3 3269 3160 2271 95 3 3 chr10 830990 831286 -139485479 + AluSx SINE Alu 11 306 -6 353 266 101 0 chr10 831544 831653 -139485112 + L3 LINE CR1 664 783 -794 556 228 151 53 chr10 831739 831945 -139484820 + MIR SINE MIR 2 227 -35 2239 87 27 7 chr10 833436 833734 -139483031 - AluSq SINE Alu -9 304 1 2098 145 14 0 chr10 834060 834356 -139482409 - AluSx SINE Alu -12 300 1 212 296 157 35 chr10 834637 834752 -139482013 - L2 LINE L2 0 3313 3185 2551 49 0 19 chr10 834760 835067 -139481698 + AluY SINE Alu 1 301 -10 287 274 123 0 chr10 835508 835581 -139481184 + L2 LINE L2 3136 3217 -55 2861 22 0 0 chr10 836003 836314 -139480451 - AluY SINE Alu 0 311 1 2549 67 0 0 chr10 836438 836736 -139480029 + AluY SINE Alu 1 298 -13 198 191 270 0 chr10 837055 837118 -139479647 - MIR SINE MIR -63 145 66 2113 123 20 7 chr10 837567 837868 -139478897 - AluSx SINE Alu -7 305 1 1973 82 4 0 chr10 838136 838380 -139478385 - AluSq SINE Alu -68 245 1 240 214 107 0 chr10 838454 838510 -139478255 + L2 LINE L2 3211 3272 0 2128 109 7 7 chr10 838578 838888 -139477877 - AluSx SINE Alu 0 310 1 299 265 312 12 chr10 839135 839305 -139477460 - L2 LINE L2 -19 3294 3074 639 279 293 12 chr10 839437 840199 -139476566 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 840394 840422 -139476343 + AT_rich Low_complexity Low_complexity 1 28 0 200 246 56 84 chr10 841186 841328 -139475437 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 842381 842402 -139474363 + AT_rich Low_complexity Low_complexity 1 21 0 1940 169 0 16 chr10 842402 842715 -139474050 - AluJb SINE Alu 0 312 5 482 290 54 11 chr10 842866 843052 -139473713 - MER3 DNA MER1_type -1 208 15 2203 122 0 13 chr10 843429 843741 -139473024 - AluSq SINE Alu -4 309 2 2277 135 0 0 chr10 843997 844309 -139472456 + AluSq SINE Alu 1 312 -1 2491 63 13 0 chr10 844556 844856 -139471909 - AluY SINE Alu -7 304 1 267 174 22 0 chr10 845882 845928 -139470837 + MER5A DNA MER1_type 2 48 -141 1115 204 28 45 chr10 845928 846231 -139470534 - L1 LINE L1 -3222 3945 3638 2249 119 6 3 chr10 846231 846542 -139470223 - AluSx SINE Alu 0 312 1 1115 204 28 45 chr10 846542 846831 -139469934 - L1 LINE L1 -3529 3638 3252 * 8508 194 80 24 chr10 846816 849449 -139467316 - L1 LINE L1 -4178 2990 181 2302 76 3 10 chr10 849449 849763 -139467002 - AluY SINE Alu 0 311 1 8508 194 80 24 chr10 849763 849952 -139466813 - L1 LINE L1 -6987 181 4 2285 96 3 0 chr10 850676 850967 -139465798 + AluSq SINE Alu 1 292 -21 956 138 0 0 chr10 851772 851910 -139464855 + FLAM_C SINE Alu 1 138 -5 380 305 177 55 chr10 852184 852451 -139464314 - L1M4 LINE L1 -801 5345 5112 2041 116 35 3 chr10 852451 852735 -139464030 + AluSx SINE Alu 2 294 -18 380 305 177 55 chr10 852735 853054 -139463711 - L1M4 LINE L1 -1034 5112 4687 1738 154 62 0 chr10 854049 854321 -139462444 + AluJb SINE Alu 1 289 -23 1908 114 0 22 chr10 857289 857562 -139459203 - AluSx SINE Alu -4 308 42 198 191 270 0 chr10 858078 858141 -139458624 - MIR SINE MIR -63 145 66 2263 104 3 3 chr10 858592 858890 -139457875 - AluSg SINE Alu -12 298 1 2325 75 20 3 chr10 858892 859186 -139457579 - AluSq SINE Alu -13 300 2 2125 122 10 10 chr10 860611 860914 -139455851 - AluSx SINE Alu -8 304 2 620 156 0 0 chr10 861979 862075 -139454690 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 226 103 0 26 chr10 862072 862111 -139454654 + Tigger4(Zombi) DNA MER2_type 2136 2173 -558 * 622 259 0 8 chr10 862111 862242 -139454523 + FLAM_A SINE Alu 2 131 -2 1880 159 6 22 chr10 862244 862558 -139454207 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 862558 862587 -139454178 + AT_rich Low_complexity Low_complexity 1 29 0 3281 160 40 5 chr10 862587 863143 -139453622 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 238 263 132 0 chr10 865135 865211 -139451554 + L2 LINE L2 3168 3253 -19 3644 201 84 22 chr10 865592 865896 -139450869 + MER21B LTR ERV1 1 285 -578 2226 95 0 23 chr10 865896 866201 -139450564 + AluSx SINE Alu 1 298 -14 3644 201 84 22 chr10 866201 866695 -139450070 + MER21B LTR ERV1 285 848 -15 187 167 0 0 chr10 866905 866935 -139449830 + L2 LINE L2 3216 3245 -27 2593 62 0 0 chr10 866985 867290 -139449475 + AluY SINE Alu 1 305 -6 2216 117 0 0 chr10 867476 867774 -139448991 + AluSq SINE Alu 1 298 -15 2310 121 70 17 chr10 867931 868346 -139448419 + LTR23 LTR ERV1 1 437 0 3542 208 54 60 chr10 869224 870166 -139446599 + LTR23-int LTR ERV1 1558 2493 -3838 1071 62 72 135 chr10 870166 870374 -139446391 + MER30 DNA MER1_type 1 195 -35 711 203 172 55 chr10 870390 870564 -139446201 + LTR23-int LTR ERV1 769 984 -4139 1383 141 97 62 chr10 870564 870854 -139445911 + AluJb SINE Alu 1 300 -12 711 203 172 55 chr10 870854 870935 -139445830 + LTR23-int LTR ERV1 984 1054 -4069 323 247 45 11 chr10 870936 871025 -139445740 + MER34C LTR ERV1 241 332 -253 1901 196 126 105 chr10 871035 871613 -139445152 + LTR23-int LTR ERV1 1160 1724 -3399 266 200 0 36 chr10 871613 871635 -139445130 + AluSg/x SINE Alu 116 135 -167 289 79 0 0 chr10 871635 871673 -139445092 + Alu SINE Alu 1 38 -262 * 1461 156 0 0 chr10 871673 871898 -139444867 + AluSg/x SINE Alu 73 297 -15 1901 196 126 105 chr10 871898 872401 -139444364 + LTR23-int LTR ERV1 1727 2325 -2798 531 77 26 0 chr10 872407 872485 -139444280 + AluSg/x SINE Alu 217 296 -16 2042 102 0 22 chr10 872494 872769 -139443996 + AluSg SINE Alu 6 274 -36 1369 210 61 6 chr10 872819 873147 -139443618 + LTR23-int LTR ERV1 2319 2664 -2459 841 153 8 0 chr10 873147 873278 -139443487 + FRAM SINE Alu 35 166 -10 3636 128 92 48 chr10 873279 873497 -139443268 + LTR23-int LTR ERV1 3810 4017 -2314 2219 67 3 89 chr10 873497 873824 -139442941 + AluY SINE Alu 1 299 -12 3636 128 92 48 chr10 873824 874358 -139442407 + LTR23-int LTR ERV1 4017 4595 -1736 2290 91 3 0 chr10 874387 874673 -139442092 + AluSp SINE Alu 1 287 -26 206 313 50 0 chr10 874941 875021 -139441744 + MIR SINE MIR 97 180 -82 2068 119 0 11 chr10 875087 875372 -139441393 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 875424 875472 -139441293 + T-rich Low_complexity Low_complexity 3 51 0 1603 151 48 11 chr10 875811 876083 -139440682 + AluJb SINE Alu 1 282 -30 2211 92 0 35 chr10 876440 876756 -139440009 - AluSq SINE Alu -8 305 1 2179 106 3 13 chr10 877627 877929 -139438836 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 878316 878341 -139438424 + AT_rich Low_complexity Low_complexity 1 25 0 2214 103 0 0 chr10 878850 879159 -139437606 + AluSx SINE Alu 1 309 0 442 300 55 38 chr10 879575 879812 -139436953 + L2 LINE L2 3069 3309 -4 1366 147 100 47 chr10 880437 880716 -139436049 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 881311 881390 -139435375 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2130 111 3 10 chr10 881595 881893 -139434872 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 881965 882008 -139434757 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 502 162 0 76 chr10 882010 882115 -139434650 - AluJo SINE Alu -31 281 185 592 224 8 0 chr10 882127 882252 -139434513 - AluJo SINE Alu -186 126 1 1905 130 3 89 chr10 882316 882685 -139434080 + MER1B DNA MER1_type 1 337 0 2491 87 3 0 chr10 883380 883692 -139433073 - AluSp SINE Alu 0 313 1 1898 156 7 7 chr10 883890 884192 -139432573 - AluSx SINE Alu -10 302 1 186 245 82 0 chr10 884426 884475 -139432290 - MIR SINE MIR -126 82 30 316 130 0 0 chr10 885300 885346 -139431419 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 885500 885531 -139431234 + AT_rich Low_complexity Low_complexity 1 31 0 2358 61 0 17 chr10 885585 885879 -139430886 - AluY SINE Alu -22 289 1 2085 134 3 3 chr10 886017 886323 -139430442 - AluJb SINE Alu -6 306 1 507 125 313 9 chr10 886350 886462 -139430303 - LTR23 LTR ERV1 0 437 292 515 189 54 0 chr10 886509 886620 -139430145 - LTR23-int LTR ERV1 -223 4900 4784 6076 140 36 12 chr10 886636 887678 -139429087 - LTR23-int LTR ERV1 -663 5668 4602 1617 188 4 4 chr10 887678 887950 -139428815 + AluJo SINE Alu 3 274 -38 25 0 0 0 chr10 888345 888370 -139428395 + AT_rich Low_complexity Low_complexity 1 25 0 1808 163 42 22 chr10 888370 888727 -139428038 - L1MB3 LINE L1 -7 6176 5813 682 155 66 94 chr10 888729 888910 -139427855 - MLT2B2 LTR ERVL 0 515 340 1259 283 58 16 chr10 889010 889601 -139427164 - L1MDb LINE L1 -3890 2650 2112 4032 190 30 7 chr10 889686 890235 -139426530 + MER44D DNA MER2_type 6 448 -2039 1617 101 8 38 chr10 890235 890473 -139426292 + AluSx SINE Alu 1 231 -81 4032 190 30 7 chr10 890473 890635 -139426130 + MER44D DNA MER2_type 448 605 0 2295 102 3 0 chr10 890664 890967 -139425798 - AluY SINE Alu -7 304 1 1798 212 50 18 chr10 890969 891465 -139425300 - L1MDb LINE L1 -4488 2052 1541 24233 31 2 0 chr10 891480 895124 -139421641 - L1PA3 LINE L1 0 6155 2513 3601 63 9 0 chr10 895128 895588 -139421177 - L1PA3 LINE L1 -5626 520 57 743 233 54 18 chr10 895589 895858 -139420907 - L1MDb LINE L1 -4988 1555 1196 804 80 0 0 chr10 896050 896150 -139420615 - AluSp/q SINE Alu -15 298 199 1449 71 0 0 chr10 896161 896330 -139420435 + AluY SINE Alu 1 169 -142 810 206 17 0 chr10 896438 896613 -139420152 + AluY SINE Alu 111 288 -23 1101 171 0 6 chr10 896639 896820 -139419945 - AluSx SINE Alu -132 180 1 369 258 158 54 chr10 897259 897701 -139419064 + L1M2 LINE L1 756 1243 -5606 225 351 21 64 chr10 897956 898144 -139418621 - L1MDb LINE L1 -6310 230 51 814 324 21 24 chr10 898215 898592 -139418173 - L1MEc LINE L1 -4394 2002 1627 2132 122 0 0 chr10 898658 898945 -139417820 - AluSx SINE Alu -25 287 1 466 299 44 28 chr10 899810 900061 -139416704 + L1MB3 LINE L1 5304 5558 -2250 1060 123 0 7 chr10 900547 900702 -139416063 + FRAM SINE Alu 1 154 -12 1330 191 61 29 chr10 900949 901294 -139415471 + L1MB3 LINE L1 5807 6162 -21 1314 77 0 22 chr10 901295 901460 -139415305 - AluSc SINE Alu -13 296 134 2267 119 7 0 chr10 901460 901763 -139415002 - AluSx SINE Alu -7 305 1 1314 77 0 22 chr10 901763 901778 -139414987 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 901965 902184 -139414581 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 902232 902412 -139414353 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 905360 905395 -139411370 + T-rich Low_complexity Low_complexity 1 35 0 4864 174 16 7 chr10 905403 906380 -139410385 - L1PB4 LINE L1 -3 6153 5171 3262 187 14 6 chr10 906381 907023 -139409742 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 907142 907257 -139409508 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 907418 907539 -139409226 + GA-rich Low_complexity Low_complexity 2 120 0 1148 184 9 18 chr10 907776 907999 -139408766 - AluSg SINE Alu -52 258 38 2177 118 0 0 chr10 909058 909347 -139407418 + AluSx SINE Alu 11 299 -13 514 285 29 17 chr10 909468 909640 -139407125 + MIR SINE MIR 64 237 -25 518 197 8 47 chr10 909700 909827 -139406938 + MER33 DNA MER1_type 34 155 -169 431 297 27 76 chr10 909837 910100 -139406665 + AluJb SINE Alu 1 250 -52 1908 163 0 0 chr10 910310 910593 -139406172 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 911433 911490 -139405275 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 911569 911869 -139404896 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 911870 911957 -139404808 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 911973 912027 -139404738 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 913486 913516 -139403249 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 913801 913821 -139402944 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 916120 916386 -139400379 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 916465 916545 -139400220 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 917876 918173 -139398592 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 918853 919092 -139397673 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 919092 919397 -139397368 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 919397 919868 -139396897 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 919878 919899 -139396866 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 919910 920309 -139396456 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 920909 920951 -139395814 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 921156 921458 -139395307 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 921857 921903 -139394862 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 921999 922299 -139394466 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 923043 923262 -139393503 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 923839 923902 -139392863 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 923910 924055 -139392710 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 924062 924195 -139392570 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 924197 924502 -139392263 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 924508 924766 -139391999 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 925288 925575 -139391190 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 925660 925683 -139391082 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 925900 926149 -139390616 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 926587 926931 -139389834 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 927048 927337 -139389428 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 927457 927632 -139389133 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 927637 927668 -139389097 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 927698 927753 -139389012 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 927753 928057 -139388708 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 928057 928143 -139388622 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 928261 928560 -139388205 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 928857 929156 -139387609 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 930112 930384 -139386381 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 930975 931021 -139385744 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 931887 932197 -139384568 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 932275 932407 -139384358 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 932881 933134 -139383631 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 933526 933575 -139383190 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 933577 933640 -139383125 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 933642 934163 -139382602 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 936157 936334 -139380431 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 937691 938000 -139378765 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 940287 940433 -139376332 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 940433 940473 -139376292 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 940475 940713 -139376052 - MER58 DNA MER1_type -2165 255 2 1909 153 0 0 chr10 941047 941335 -139375430 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 941441 941481 -139375284 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 941646 941767 -139374998 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 941779 941916 -139374849 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 941914 942062 -139374703 + Tigger3(Golem) DNA MER2_type 2772 2908 -121 * 345 267 155 0 chr10 942559 942675 -139374090 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 942692 942877 -139373888 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 942956 943080 -139373685 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 943867 943888 -139372877 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 944709 945000 -139371765 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 945114 945365 -139371400 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 945400 945938 -139370827 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 945952 946740 -139370025 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 946728 946931 -139369834 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 946931 947219 -139369546 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 947219 948061 -139368704 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 948061 948293 -139368472 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 948293 948835 -139367930 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 948835 949015 -139367750 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 949015 949393 -139367372 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 949808 950230 -139366535 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 951246 951534 -139365231 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 953429 953595 -139363170 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 953633 953750 -139363015 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 953812 954245 -139362520 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 954524 954820 -139361945 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 955036 955091 -139361674 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 955548 955899 -139360866 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 956015 956212 -139360553 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 956226 956238 -139360527 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 956238 956394 -139360371 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 956394 956690 -139360075 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 956690 956846 -139359919 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 957547 957642 -139359123 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 957642 957935 -139358830 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 957935 958584 -139358181 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 958629 959420 -139357345 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 959420 959731 -139357034 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 959731 960318 -139356447 + L1MDa LINE L1 1541 2466 -4074 1891 248 92 26 chr10 960326 960958 -139355807 + L1MB8 LINE L1 3776 4365 -1877 2187 85 0 3 chr10 960958 961252 -139355513 - AluY SINE Alu -18 293 1 1891 248 92 26 chr10 961252 961553 -139355212 + L1MB8 LINE L1 4365 4645 -1597 2335 96 59 31 chr10 961553 961907 -139354858 - THE1B LTR MaLR 0 364 1 1891 248 92 26 chr10 961907 962586 -139354179 + L1MB8 LINE L1 4645 5489 -753 * 2150 154 27 36 chr10 962583 963024 -139353741 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 963036 963310 -139353455 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 963318 963393 -139353372 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 963405 964051 -139352714 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 964053 964207 -139352558 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 964207 964227 -139352538 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 964227 964758 -139352007 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 964760 965063 -139351702 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 966494 966713 -139350052 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 966810 966832 -139349933 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 967287 967567 -139349198 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 968530 968903 -139347862 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 968918 969123 -139347642 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 970138 970194 -139346571 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 970234 970447 -139346318 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 970737 971035 -139345730 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 971490 971787 -139344978 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 971854 972109 -139344656 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 972866 972902 -139343863 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 973172 973274 -139343491 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 973297 973327 -139343438 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 973787 973903 -139342862 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 974177 974477 -139342288 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 974622 974917 -139341848 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 975239 975546 -139341219 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 976287 976591 -139340174 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 976706 976802 -139339963 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 977260 977629 -139339136 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 978456 978585 -139338180 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 980057 980352 -139336413 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 980439 980748 -139336017 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 984784 985079 -139331686 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 987261 988701 -139328064 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 989499 989703 -139327062 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 989779 989954 -139326811 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 989954 989975 -139326790 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 989975 990266 -139326499 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 991706 992010 -139324755 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 992032 992148 -139324617 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 992180 992217 -139324548 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 992339 992411 -139324354 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 992432 992653 -139324112 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 993998 994191 -139322574 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 996177 996537 -139320228 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 996537 997209 -139319556 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 997329 997413 -139319352 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 997472 997947 -139318818 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 997955 998132 -139318633 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 998185 998483 -139318282 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 998510 998693 -139318072 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1001040 1001425 -139315340 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1001586 1001803 -139314962 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1002228 1002629 -139314136 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1002641 1002747 -139314018 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1003936 1004571 -139312194 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1005612 1005653 -139311112 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1005653 1005944 -139310821 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1005944 1006090 -139310675 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1006370 1006392 -139310373 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1006395 1006676 -139310089 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1007287 1007381 -139309384 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1007930 1008270 -139308495 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1009303 1009588 -139307177 + AluSp SINE Alu 1 296 -17 1212 111 0 0 chr10 1011750 1011912 -139304853 - AluSg/x SINE Alu -2 310 149 12705 155 48 12 chr10 1011922 1013809 -139302956 + Tigger1 DNA MER2_type 15 2002 -416 2295 124 0 3 chr10 1013809 1014115 -139302650 - AluSx SINE Alu -7 305 1 12705 155 48 12 chr10 1014115 1014548 -139302217 + Tigger1 DNA MER2_type 2002 2418 0 322 359 0 0 chr10 1015871 1016013 -139300752 - L1PB4 LINE L1 -9 6147 6006 610 215 29 53 chr10 1016201 1016410 -139300355 - L1PB4 LINE L1 -135 6021 5818 1905 155 3 10 chr10 1016902 1017212 -139299553 - AluJb SINE Alu -4 308 1 246 224 20 0 chr10 1019624 1019673 -139297092 + L2 LINE L2 3259 3308 -5 1090 214 59 2 chr10 1023113 1023519 -139293246 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1074095 1074377 -139242388 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1076016 1076069 -139240696 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1076069 1076358 -139240407 - AluSg SINE Alu -16 294 1 181 238 71 0 chr10 1077601 1077643 -139239122 + L2 LINE L2 92 136 -3178 186 294 96 75 chr10 1079013 1079159 -139237606 + MIR SINE MIR 58 206 -56 1387 159 142 3 chr10 1081771 1082073 -139234692 + L1PA16 LINE L1 5814 6157 -9 2056 104 47 24 chr10 1082098 1082396 -139234369 + AluSx SINE Alu 1 305 -7 264 182 0 18 chr10 1082396 1082442 -139234323 - MER58 DNA MER1_type -168 47 1 1721 88 4 9 chr10 1084282 1084510 -139232255 + AluY SINE Alu 79 305 -6 3083 207 56 41 chr10 1084510 1085470 -139231295 + L1MDa LINE L1 1741 2706 -3834 1050 163 6 0 chr10 1085472 1085668 -139231097 + AluJo SINE Alu 126 322 0 4341 282 64 25 chr10 1085672 1087450 -139229315 + L1MDa LINE L1 2714 4560 -1980 2596 229 74 14 chr10 1087554 1088454 -139228311 - L1MCa LINE L1 -4634 1792 748 276 80 21 0 chr10 1092257 1092321 -139224444 + L1MC1 LINE L1 5232 5296 -850 1047 101 0 0 chr10 1092321 1092460 -139224305 + AluY SINE Alu 167 305 -6 5864 142 13 25 chr10 1092460 1092739 -139224026 + L1MC1 LINE L1 5310 5591 -742 2225 127 42 23 chr10 1092739 1093093 -139223672 - THE1B LTR MaLR -2 362 2 5864 142 13 25 chr10 1093093 1093842 -139222923 + L1MC1 LINE L1 5591 6325 -8 325 228 79 44 chr10 1093886 1094000 -139222765 + L1MC4 LINE L1 7924 8041 -1 492 241 76 19 chr10 1094211 1094369 -139222396 - Charlie8 DNA MER1_type -2179 238 72 245 304 78 9 chr10 1095307 1095422 -139221343 + Charlie7 DNA MER1_type 1754 1876 -736 1092 256 46 3 chr10 1096032 1096399 -139220366 + L1ME1 LINE L1 3045 3427 -2719 650 216 63 11 chr10 1096718 1096908 -139219857 - L1MCa LINE L1 -6211 215 16 * 1343 241 73 27 chr10 1096906 1097434 -139219331 + L1ME1 LINE L1 5550 6122 -44 280 267 30 30 chr10 1097356 1097491 -139219274 + L1MA10 LINE L1 6200 6334 0 * 390 248 8 48 chr10 1097764 1097889 -139218876 + MARNA DNA Mariner 122 241 -345 1796 122 0 4 chr10 1098371 1098626 -139218139 + AluJb SINE Alu 59 312 0 268 245 32 0 chr10 1098745 1098839 -139217926 - L1ME3A LINE L1 -219 5951 5855 385 295 66 24 chr10 1098994 1099160 -139217605 - MER5A DNA MER1_type -1 188 16 294 296 157 26 chr10 1099195 1099618 -139217147 - L1ME3A LINE L1 -542 5628 5138 371 238 6 0 chr10 1100364 1100536 -139216229 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1100552 1100642 -139216123 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1102593 1102637 -139214128 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1102891 1103343 -139213422 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1105573 1105882 -139210883 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1108112 1108173 -139208592 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1108298 1108497 -139208268 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1108772 1108894 -139207871 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1109398 1109688 -139207077 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1111938 1112104 -139204661 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1112290 1112416 -139204349 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1112422 1112608 -139204157 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2304 189 90 63 chr10 1112973 1113593 -139203172 - L1MA6 LINE L1 -106 6194 5558 341 294 88 19 chr10 1113594 1113754 -139203011 - MIR3 SINE MIR -7 201 31 23822 34 4 1 chr10 1115684 1118719 -139198046 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1118772 1118836 -139197929 + GA-rich Low_complexity Low_complexity 2 65 0 197 379 0 0 chr10 1122318 1122421 -139194344 - MER5A DNA MER1_type -3 186 84 234 301 18 35 chr10 1124435 1124548 -139192217 + L3b LINE CR1 1326 1436 -147 1370 180 20 108 chr10 1124900 1125300 -139191465 - MLT1A1 LTR MaLR 0 365 1 2820 133 17 2 chr10 1125361 1125829 -139190936 - L1MC1 LINE L1 -179 6154 5680 418 296 33 19 chr10 1125833 1126046 -139190719 - L1 LINE L1 -1127 5019 4804 1599 150 8 0 chr10 1126203 1126469 -139190296 - MSTB2 LTR MaLR 0 457 190 1095 180 57 12 chr10 1126465 1126710 -139190055 - MSTB2 LTR MaLR -201 256 1 * 528 363 39 13 chr10 1126756 1127216 -139189549 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1127298 1127329 -139189436 + (TG)n Simple_repeat Simple_repeat 1 31 0 1758 171 0 7 chr10 1127495 1127788 -139188977 - AluJo SINE Alu -21 291 1 248 312 56 0 chr10 1128752 1128877 -139187888 + LTR16A1 LTR ERVL 260 391 -66 11465 25 7 2 chr10 1129436 1131606 -139185159 + L1PA4 LINE L1 3973 6146 -9 2132 102 17 7 chr10 1134322 1134615 -139182150 - AluSq SINE Alu -17 296 1 324 230 27 14 chr10 1136914 1137062 -139179703 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1137084 1137196 -139179569 + (CA)n Simple_repeat Simple_repeat 1 113 0 312 245 132 19 chr10 1138248 1138354 -139178411 + L2 LINE L2 3180 3297 -16 1625 157 3 101 chr10 1139207 1139545 -139177220 - AluJb SINE Alu -7 305 1 2458 84 3 0 chr10 1140482 1140781 -139175984 + AluY SINE Alu 1 300 -11 2220 95 3 3 chr10 1142588 1142883 -139173882 - AluSc SINE Alu -14 295 1 1112 75 0 0 chr10 1143502 1143635 -139173130 + AluJb SINE Alu 7 139 -173 288 333 56 0 chr10 1150119 1150227 -139166538 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1151182 1151204 -139165561 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 607 271 29 6 chr10 1151264 1151434 -139165331 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1154273 1154317 -139162448 + T-rich Low_complexity Low_complexity 4 47 0 760 234 70 42 chr10 1156156 1156593 -139160172 - MLT1D LTR MaLR 0 467 5 193 300 78 0 chr10 1157523 1157613 -139159152 + MIR SINE MIR 17 113 -149 2093 91 39 11 chr10 1158361 1158647 -139158118 + AluY SINE Alu 1 294 -17 364 307 108 16 chr10 1159312 1159745 -139157020 - L1MCa LINE L1 -4656 1875 1246 1419 249 8 32 chr10 1159788 1160162 -139156603 + MLT2D LTR ERVL 1 365 -49 376 42 56 14 chr10 1160166 1160238 -139156527 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 299 289 76 5 chr10 1160239 1160436 -139156329 - L1MCa LINE L1 -5014 1402 1192 192 40 0 0 chr10 1161081 1161106 -139155659 + (T)n Simple_repeat Simple_repeat 1 25 0 439 289 179 10 chr10 1161771 1162072 -139154693 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1162235 1162277 -139154488 + AT_rich Low_complexity Low_complexity 1 42 0 826 152 0 0 chr10 1162459 1162591 -139154174 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1165303 1165356 -139151409 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1167798 1167933 -139148832 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1167933 1168031 -139148734 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1168029 1168168 -139148597 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1169237 1169397 -139147368 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1169508 1169691 -139147074 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1169961 1170156 -139146609 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1171301 1171454 -139145311 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1172755 1173038 -139143727 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1173932 1174056 -139142709 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1174426 1174548 -139142217 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1174938 1175116 -139141649 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1175240 1175386 -139141379 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1176766 1176796 -139139969 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 22908 47 10 3 chr10 1176914 1179860 -139136905 - L1P LINE L1 -3180 2966 1 192 77 0 0 chr10 1180235 1180261 -139136504 + (ATG)n Simple_repeat Simple_repeat 1 26 0 370 309 0 4 chr10 1181947 1182187 -139134578 + (TG)n Simple_repeat Simple_repeat 1 238 0 286 90 56 34 chr10 1184431 1184520 -139132245 + (CA)n Simple_repeat Simple_repeat 1 91 0 252 149 75 15 chr10 1184633 1184767 -139131998 + (TG)n Simple_repeat Simple_repeat 1 142 0 321 119 73 26 chr10 1184803 1184954 -139131811 + (TG)n Simple_repeat Simple_repeat 1 158 0 181 159 65 41 chr10 1184929 1185099 -139131666 + (GTGTG)n Simple_repeat Simple_repeat 2 175 0 * 353 132 72 24 chr10 1185084 1185251 -139131514 + (TG)n Simple_repeat Simple_repeat 1 175 0 7660 19 14 0 chr10 1185803 1187323 -139129442 + L1PA2 LINE L1 4659 6174 0 7524 32 7 7 chr10 1187323 1188293 -139128472 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1189286 1189653 -139127112 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 279 0 0 0 chr10 1190287 1190318 -139126447 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 74 0 0 chr10 1191852 1191879 -139124886 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 21317 31 6 3 chr10 1192037 1195394 -139121371 + L1PA4 LINE L1 2644 6007 -148 181 116 23 23 chr10 1195577 1195620 -139121145 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 237 349 47 28 chr10 1195621 1195727 -139121038 - L2 LINE L2 -19 3253 3146 1386 219 103 25 chr10 1195816 1196214 -139120551 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1197355 1197548 -139119217 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 483 309 69 56 chr10 1201528 1201832 -139114933 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1201840 1201997 -139114768 + MIR SINE MIR 46 207 -55 2271 103 0 0 chr10 1202255 1202565 -139114200 - AluSx SINE Alu -2 310 1 483 309 69 56 chr10 1204212 1204516 -139112249 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1204524 1204681 -139112084 + MIR SINE MIR 46 207 -55 800 190 98 0 chr10 1204939 1205102 -139111663 - AluSg/x SINE Alu -2 308 130 2980 201 80 7 chr10 1205102 1205988 -139110777 + L1MB3 LINE L1 5152 6100 -83 1993 125 0 55 chr10 1206485 1206812 -139109953 - AluSx SINE Alu -3 309 1 1596 176 0 14 chr10 1206960 1207255 -139109510 - AluJo SINE Alu -11 301 11 2149 114 13 0 chr10 1207259 1207566 -139109199 - AluSx SINE Alu -1 311 1 231 366 0 38 chr10 1208860 1209043 -139107722 + C-rich Low_complexity Low_complexity 4 179 0 1854 138 43 0 chr10 1209771 1210053 -139106712 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1214108 1217301 -139099464 - L1PA4 LINE L1 -1 6154 2969 186 294 96 75 chr10 1219338 1219484 -139097281 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1221136 1221360 -139095405 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1221568 1221789 -139094976 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1222503 1222715 -139094050 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1223449 1223499 -139093266 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1223675 1223780 -139092985 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1223791 1223995 -139092770 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1225906 1226020 -139090745 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1226204 1226437 -139090328 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1227152 1227503 -139089262 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1227618 1227781 -139088984 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1228358 1228459 -139088306 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1229864 1230927 -139085838 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1230927 1232285 -139084480 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1232289 1232310 -139084455 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1232314 1232637 -139084128 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1232650 1232964 -139083801 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1233423 1233625 -139083140 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1233661 1233972 -139082793 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1233974 1234055 -139082710 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1234059 1234402 -139082363 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1234461 1234632 -139082133 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1237651 1237762 -139079003 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1238445 1238558 -139078207 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1238897 1239029 -139077736 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1240927 1241083 -139075682 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1241618 1241931 -139074834 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1242708 1242943 -139073822 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1243230 1243821 -139072944 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1244795 1244945 -139071820 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1246510 1246631 -139070134 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1247309 1247535 -139069230 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1247705 1247883 -139068882 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1249330 1249498 -139067267 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1251561 1251732 -139065033 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1251794 1252269 -139064496 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1252279 1252523 -139064242 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1253233 1253533 -139063232 - AluSq SINE Alu 0 313 14 418 225 69 27 chr10 1254766 1254917 -139061848 - L1P5 LINE L1 -460 5661 5526 1760 165 7 14 chr10 1256309 1256606 -139060159 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1256814 1256866 -139059899 + G-rich Low_complexity Low_complexity 1 49 0 3313 251 88 17 chr10 1258209 1259976 -139056789 + L1MD2 LINE L1 4448 6349 -10 181 281 88 0 chr10 1261438 1261495 -139055270 + MIR SINE MIR 62 123 -85 224 237 17 0 chr10 1261525 1261584 -139055181 + GA-rich Low_complexity Low_complexity 1 60 0 1843 173 3 22 chr10 1263636 1263949 -139052816 + AluJb SINE Alu 1 307 -5 228 67 0 0 chr10 1264857 1264887 -139051878 + (T)n Simple_repeat Simple_repeat 1 30 0 594 259 11 52 chr10 1265381 1265555 -139051210 + L1MB7 LINE L1 3969 4135 -2011 3651 185 68 42 chr10 1265566 1266688 -139050077 + L1MB7 LINE L1 5032 6184 0 242 192 247 0 chr10 1266699 1266772 -139049993 - Charlie7 DNA MER1_type -2516 96 6 1576 188 3 41 chr10 1267050 1267370 -139049395 + AluJb SINE Alu 2 309 -3 195 178 111 0 chr10 1267590 1267635 -139049130 + L3 LINE CR1 1525 1574 -3 227 307 207 27 chr10 1268254 1268404 -139048361 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1270242 1270321 -139046444 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 228 310 129 9 chr10 1270721 1270837 -139045928 - MER5A DNA MER1_type -3 186 57 220 236 127 73 chr10 1270878 1270988 -139045777 + L2 LINE L2 3154 3269 -3 418 225 81 12 chr10 1271288 1271448 -139045317 + MER76 LTR ERV 1 171 -517 200 222 0 0 chr10 1272320 1272356 -139044409 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1273317 1273363 -139043402 + CT-rich Low_complexity Low_complexity 3 48 0 1099 190 113 12 chr10 1273525 1273772 -139042993 - L1MC1 LINE L1 0 6333 6062 43203 34 23 10 chr10 1273775 1279851 -139036914 + L1PA2 LINE L1 3 6154 -1 3304 170 66 2 chr10 1279864 1280482 -139036283 - L1MC1 LINE L1 -261 6072 5415 238 305 12 12 chr10 1281878 1281960 -139034805 - L2 LINE L2 0 3313 3232 224 292 15 0 chr10 1282311 1282376 -139034389 - L2 LINE L2 -4 3309 3244 257 268 12 49 chr10 1282867 1282949 -139033816 + MIR SINE MIR 40 118 -90 297 310 86 0 chr10 1284497 1284649 -139032116 - MIR SINE MIR -68 140 17 240 100 0 0 chr10 1286325 1286365 -139030400 + (TCC)n Simple_repeat Simple_repeat 3 42 0 22 0 0 0 chr10 1289121 1289143 -139027622 + AT_rich Low_complexity Low_complexity 1 22 0 1042 224 103 24 chr10 1340614 1340944 -138975821 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1341206 1341345 -138975420 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1341974 1342100 -138974665 + MIR SINE MIR 59 191 -71 10548 37 2 0 chr10 1342765 1344046 -138972719 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1344146 1344246 -138972519 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1344246 1344551 -138972214 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1344551 1344594 -138972171 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1345296 1345518 -138971247 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1345520 1345588 -138971177 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1345588 1346369 -138970396 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1346469 1347202 -138969563 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1348914 1348945 -138967820 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1349072 1349116 -138967649 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1349080 1349132 -138967633 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1349303 1349377 -138967388 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1349980 1350053 -138966712 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1350560 1350790 -138965975 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1351933 1352098 -138964667 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1352207 1352405 -138964360 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1352408 1352450 -138964315 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1352448 1352507 -138964258 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1352507 1352573 -138964192 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1352575 1352648 -138964117 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1352650 1352702 -138964063 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1352732 1352908 -138963857 + L1M3c LINE L1 64 248 -6294 1333 222 64 12 chr10 1353073 1353411 -138963354 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1354943 1354965 -138961800 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1355242 1355420 -138961345 + (CA)n Simple_repeat Simple_repeat 2 180 0 2430 92 0 0 chr10 1356087 1356392 -138960373 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1356645 1357297 -138959468 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1358062 1358357 -138958408 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1359503 1359537 -138957228 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1360096 1360153 -138956612 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1361486 1361689 -138955076 + L1M3c LINE L1 652 862 -5772 358 237 26 105 chr10 1361936 1362088 -138954677 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1362111 1362139 -138954626 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1362138 1362176 -138954589 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1362438 1362644 -138954121 + L1M3c LINE L1 881 1086 -5479 1857 231 160 45 chr10 1362772 1363572 -138953193 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1363672 1364719 -138952046 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1364819 1365955 -138950810 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1366055 1366425 -138950340 + L1MC1 LINE L1 5950 6328 -5 602 152 27 0 chr10 1366430 1366542 -138950223 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1366562 1366889 -138949876 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1366889 1367176 -138949589 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1367176 1367396 -138949369 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1367406 1367558 -138949207 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1367688 1368820 -138947945 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1368821 1369413 -138947352 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1369688 1369716 -138947049 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1371208 1372434 -138944331 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1372432 1372595 -138944170 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1372855 1372883 -138943882 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1373156 1373229 -138943536 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1373678 1373720 -138943045 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1374531 1374761 -138942004 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1375004 1375040 -138941725 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1377556 1377861 -138938904 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1379247 1380291 -138936474 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1380397 1380842 -138935923 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1380844 1381327 -138935438 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1381346 1381652 -138935113 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1381653 1382538 -138934227 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1382656 1384174 -138932591 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1384521 1384570 -138932195 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1384744 1384897 -138931868 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1384966 1385074 -138931691 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1385123 1385308 -138931457 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1385309 1386340 -138930425 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1386345 1386410 -138930355 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1386984 1387038 -138929727 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1387499 1387612 -138929153 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1387677 1387726 -138929039 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1387758 1388146 -138928619 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1388766 1389960 -138926805 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1389955 1390568 -138926197 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1392041 1392183 -138924582 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1392183 1392397 -138924368 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1392397 1392446 -138924319 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1396785 1397035 -138919730 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1397135 1398149 -138918616 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1398149 1398460 -138918305 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1398460 1398926 -138917839 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1398925 1399164 -138917601 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1399265 1399369 -138917396 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1399459 1399906 -138916859 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1400248 1400611 -138916154 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1401010 1401057 -138915708 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1401057 1401926 -138914839 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1401937 1402249 -138914516 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1402360 1403585 -138913180 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1403586 1403930 -138912835 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1403932 1404395 -138912370 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1404495 1404608 -138912157 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1405674 1405818 -138910947 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1406176 1406250 -138910515 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1409701 1410058 -138906707 + MLT1A1 LTR MaLR 1 365 0 7176 220 113 9 chr10 1412326 1414416 -138902349 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1414416 1414516 -138902249 + THE1C LTR MaLR 1 100 -275 6432 136 30 9 chr10 1414991 1417213 -138899552 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1418053 1418078 -138898687 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1418900 1419002 -138897763 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1419108 1420626 -138896139 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1420626 1420751 -138896014 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1420751 1422053 -138894712 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1422049 1422153 -138894612 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1422153 1422188 -138894577 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1422646 1422837 -138893928 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1422843 1424708 -138892057 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1424686 1424774 -138891991 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1424874 1425553 -138891212 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1425833 1426120 -138890645 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1426126 1426464 -138890301 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1426464 1427128 -138889637 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1427109 1427164 -138889601 + THE1B-int LTR MaLR 1521 1575 -5 * 191 311 49 0 chr10 1428204 1428265 -138888500 - L2 LINE L2 -8 3264 3201 247 292 109 58 chr10 1429477 1429614 -138887151 - L2 LINE L2 -1 3271 3128 299 380 0 0 chr10 1429735 1429864 -138886901 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1432037 1432360 -138884405 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1432833 1432861 -138883904 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1434173 1434383 -138882382 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1435829 1438036 -138878729 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1438149 1438296 -138878469 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1438338 1438516 -138878249 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1439153 1439260 -138877505 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1439370 1439516 -138877249 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1439541 1439781 -138876984 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1440246 1440349 -138876416 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1440553 1440756 -138876009 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1440857 1441141 -138875624 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1441304 1441501 -138875264 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1443234 1443353 -138873412 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1443562 1443863 -138872902 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1445374 1445398 -138871367 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1445398 1445545 -138871220 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1445545 1445850 -138870915 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1445850 1446336 -138870429 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1446336 1447336 -138869429 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1448563 1449105 -138867660 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1449641 1449741 -138867024 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1450456 1450544 -138866221 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1452162 1452197 -138864568 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1453553 1453687 -138863078 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1454546 1454636 -138862129 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1454698 1454767 -138861998 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1455799 1455890 -138860875 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1456022 1456310 -138860455 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1458245 1458266 -138858499 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1459348 1459415 -138857350 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1459926 1459999 -138856766 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1460659 1460933 -138855832 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1460933 1461248 -138855517 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1461248 1461376 -138855389 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1462331 1463493 -138853272 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1464173 1464340 -138852425 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1466088 1466198 -138850567 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 251 261 15 0 chr10 1467524 1467589 -138849176 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1468735 1468910 -138847855 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1469604 1469639 -138847126 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1470699 1470727 -138846038 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1470974 1471532 -138845233 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1473503 1473922 -138842843 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1473939 1474212 -138842553 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1475108 1475276 -138841489 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1475276 1475568 -138841197 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1475568 1475749 -138841016 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1475764 1475817 -138840948 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1475798 1475851 -138840914 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1475866 1475919 -138840846 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1475968 1476021 -138840744 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1476002 1476055 -138840710 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1476036 1476123 -138840642 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1476138 1476191 -138840574 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476172 1476241 -138840524 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1476233 1476293 -138840472 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1476444 1476497 -138840268 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476478 1476547 -138840218 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1476539 1476599 -138840166 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1476580 1476632 -138840133 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1476614 1476667 -138840098 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1476648 1476701 -138840064 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1476725 1476805 -138839960 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1477336 1477357 -138839408 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1477546 1477838 -138838927 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1478329 1478681 -138838084 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1479722 1480086 -138836679 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1480978 1481044 -138835721 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1481289 1481425 -138835340 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1481496 1481804 -138834961 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1482983 1483457 -138833308 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1484212 1484342 -138832423 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1484352 1487747 -138829018 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1489028 1489074 -138827691 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1489321 1489450 -138827315 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1489782 1490390 -138826375 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1490499 1490799 -138825966 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1492755 1493056 -138823709 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1493129 1493161 -138823604 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1493775 1494070 -138822695 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1495200 1495379 -138821386 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1495688 1495816 -138820949 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1495839 1496017 -138820748 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1497603 1497683 -138819082 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1497690 1497730 -138819035 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1497752 1497810 -138818955 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1499711 1499851 -138816914 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1500630 1500829 -138815936 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1502138 1502468 -138814297 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1502474 1503201 -138813564 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1503496 1503577 -138813188 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1506931 1506960 -138809805 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1507043 1507412 -138809353 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1507491 1507661 -138809104 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1507823 1507983 -138808782 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1508310 1508481 -138808284 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1508558 1508717 -138808048 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1508870 1508986 -138807779 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1508986 1509007 -138807758 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1509007 1509165 -138807600 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1509166 1509287 -138807478 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1509306 1509480 -138807285 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1509481 1510501 -138806264 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1510988 1511012 -138805753 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1511357 1511418 -138805347 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1511419 1511793 -138804972 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1511795 1511970 -138804795 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1511968 1512968 -138803797 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1512979 1513056 -138803709 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1513056 1513235 -138803530 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1513342 1517807 -138798958 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1517921 1518149 -138798616 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1518178 1518500 -138798265 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1518526 1518693 -138798072 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1518745 1518791 -138797974 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1519753 1520761 -138796004 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1520761 1524369 -138792396 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1524377 1524502 -138792263 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1524508 1524630 -138792135 + LTR33 LTR ERVL 2 136 -385 180 77 0 0 chr10 1524732 1524758 -138792007 + (CCA)n Simple_repeat Simple_repeat 3 28 0 268 229 14 14 chr10 1526102 1526172 -138790593 + L1MCa LINE L1 20 89 -6337 23 0 0 0 chr10 1527866 1527889 -138788876 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1528388 1528611 -138788154 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1529424 1529625 -138787140 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1530029 1530175 -138786590 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1530217 1530417 -138786348 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1530671 1530727 -138786038 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1530919 1531257 -138785508 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1531285 1531457 -138785308 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1531555 1531576 -138785189 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1531851 1531911 -138784854 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1531936 1532246 -138784519 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1534768 1534857 -138781908 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1535869 1536237 -138780528 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1538641 1539060 -138777705 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1539060 1539357 -138777408 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1539357 1540212 -138776553 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1540473 1540606 -138776159 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1541429 1541705 -138775060 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1542457 1542830 -138773935 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1543423 1543458 -138773307 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1545777 1546087 -138770678 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1549081 1549966 -138766799 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1550068 1550201 -138766564 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1551059 1551148 -138765617 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1551506 1551812 -138764953 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1552146 1552452 -138764313 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1554385 1554561 -138762204 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1554604 1554955 -138761810 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1555613 1555658 -138761107 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1556977 1557085 -138759680 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1557366 1557436 -138759329 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1557885 1558362 -138758403 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1558520 1558709 -138758056 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1558722 1558817 -138757948 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1559926 1560062 -138756703 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1562628 1562677 -138754088 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1563128 1563156 -138753609 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1563947 1564125 -138752640 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1564165 1564613 -138752152 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1564657 1564705 -138752060 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1566592 1567008 -138749757 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1567809 1568371 -138748394 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1568848 1568881 -138747884 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1568897 1569393 -138747372 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1569393 1569690 -138747075 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1569690 1569866 -138746899 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1569868 1570026 -138746739 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1570041 1570240 -138746525 - L1MC/D LINE L1 -583 5572 5493 261 315 76 51 chr10 1570360 1570557 -138746208 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1571728 1571908 -138744857 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1572776 1572995 -138743770 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1576267 1576354 -138740411 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1580250 1580359 -138736406 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1580359 1580519 -138736246 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1580536 1580680 -138736085 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1580815 1580889 -138735876 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1581189 1581409 -138735356 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1583085 1583386 -138733379 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1587413 1587521 -138729244 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1587723 1587939 -138728826 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1587915 1588040 -138728725 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1588494 1588598 -138728167 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1588624 1589138 -138727627 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1589587 1589610 -138727155 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1593181 1593274 -138723491 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1596044 1596145 -138720620 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1596797 1596939 -138719826 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1599100 1599208 -138717557 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1601276 1601468 -138715297 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1601468 1601491 -138715274 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1601491 1601701 -138715064 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1603206 1603296 -138713469 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1603583 1603757 -138713008 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1603758 1603807 -138712958 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1605346 1605505 -138711260 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1605507 1605621 -138711144 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1605625 1605723 -138711042 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1607464 1607762 -138709003 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1609182 1609270 -138707495 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1610839 1610952 -138705813 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1611387 1611504 -138705261 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1611900 1612193 -138704572 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1612196 1612295 -138704470 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1612295 1612582 -138704183 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1612582 1614225 -138702540 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1614236 1614453 -138702312 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1614489 1615639 -138701126 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1615786 1616119 -138700646 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1616761 1616902 -138699863 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1616902 1617246 -138699519 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1617246 1617274 -138699491 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1617597 1617621 -138699144 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1617908 1617938 -138698827 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1619770 1619814 -138696951 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1622132 1622185 -138694580 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1623110 1623314 -138693451 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1623653 1623971 -138692794 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1624157 1624211 -138692554 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1625187 1625427 -138691338 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1625747 1626243 -138690522 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1626243 1626462 -138690303 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1626470 1626592 -138690173 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1626592 1626631 -138690134 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1629181 1629476 -138687289 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1629615 1629788 -138686977 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1629801 1629889 -138686876 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1631502 1631683 -138685082 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1632508 1632822 -138683943 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1632790 1632842 -138683923 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1633030 1633077 -138683688 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1633582 1633633 -138683132 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1634677 1634968 -138681797 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1635146 1635249 -138681516 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1635511 1635532 -138681233 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1635635 1635782 -138680983 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1635962 1636128 -138680637 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1638887 1639039 -138677726 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1640267 1640308 -138676457 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1640321 1640409 -138676356 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1640410 1640480 -138676285 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1640482 1640592 -138676173 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1643108 1643272 -138673493 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1644386 1644489 -138672276 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1644551 1644731 -138672034 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1644762 1644945 -138671820 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 372 40 0 chr10 1645349 1645548 -138671217 + Charlie8 DNA MER1_type 26 232 -2185 215 291 18 0 chr10 1647841 1647896 -138668869 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1648310 1648349 -138668416 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1648815 1648928 -138667837 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1650150 1650276 -138666489 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1651003 1651121 -138665644 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1653709 1653791 -138662974 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1655955 1656139 -138660626 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1657522 1657684 -138659081 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1659157 1659178 -138657587 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1659651 1659711 -138657054 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1661500 1661794 -138654971 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1662094 1662124 -138654641 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1663452 1663908 -138652857 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1664029 1664324 -138652441 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1664449 1664488 -138652277 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1665486 1665873 -138650892 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1666004 1666162 -138650603 + Charlie5 DNA MER1_type 2440 2597 -15 198 0 0 0 chr10 1666370 1666392 -138650373 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1666444 1666553 -138650212 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1669796 1669986 -138646779 - L1PA4 LINE L1 -4 6151 5965 287 274 129 16 chr10 1671502 1671626 -138645139 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1672100 1672133 -138644632 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1672396 1672503 -138644262 + CT-rich Low_complexity Low_complexity 3 106 0 1994 159 7 0 chr10 1672511 1672819 -138643946 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1672996 1673031 -138643734 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1673919 1673939 -138642826 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1897 127 0 12 chr10 1673948 1674207 -138642558 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1674469 1675465 -138641300 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1675465 1675500 -138641265 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1677841 1677882 -138638883 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1677882 1677907 -138638858 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1677907 1677984 -138638781 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1678327 1678493 -138638272 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1678970 1679091 -138637674 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1679837 1679953 -138636812 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1681933 1682008 -138634757 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1687117 1687185 -138629580 + (TA)n Simple_repeat Simple_repeat 2 70 0 180 0 0 0 chr10 1689235 1689255 -138627510 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1689825 1689846 -138626919 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1693630 1693752 -138623013 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1695452 1695671 -138621094 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1696854 1697119 -138619646 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1701629 1701818 -138614947 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1703099 1703681 -138613084 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1703681 1703841 -138612924 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1703888 1705060 -138611705 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1705047 1705145 -138611620 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1705145 1705413 -138611352 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1705413 1706353 -138610412 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1707058 1707140 -138609625 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1709886 1709986 -138606779 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1710567 1710621 -138606144 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1711201 1711223 -138605542 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1711661 1711693 -138605072 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1711696 1711798 -138604967 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1762549 1762622 -138554143 + (TA)n Simple_repeat Simple_repeat 2 74 0 1670 53 5 0 chr10 1763255 1763461 -138553304 - AluY SINE Alu -3 308 102 1772 140 19 0 chr10 1763978 1764242 -138552523 - AluSg SINE Alu -18 292 24 1537 165 38 52 chr10 1764272 1764563 -138552202 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1764752 1764775 -138551990 + AT_rich Low_complexity Low_complexity 1 23 0 1772 111 96 4 chr10 1764803 1765096 -138551669 + AluSp SINE Alu 1 317 0 2482 129 26 7 chr10 1765836 1766263 -138550502 + MER83 LTR ERV1 5 439 -9 266 226 73 15 chr10 1766398 1766535 -138550230 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1766538 1766596 -138550169 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1766683 1766712 -138550053 + AT_rich Low_complexity Low_complexity 1 29 0 309 240 39 19 chr10 1766762 1766884 -138549881 - L1MC2 LINE L1 -10 6334 6206 4641 200 23 11 chr10 1766980 1768448 -138548317 - L1MC3 LINE L1 -109 8487 5535 1202 149 8 56 chr10 1768448 1768716 -138548049 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1769774 1769908 -138546857 + (CA)n Simple_repeat Simple_repeat 1 134 0 180 122 163 0 chr10 1770294 1770343 -138546422 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1770538 1770656 -138546109 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 321 226 10 10 chr10 1770659 1770761 -138546004 - L1MC2 LINE L1 -2337 5471 5370 252 86 0 0 chr10 1770975 1771010 -138545755 + (TG)n Simple_repeat Simple_repeat 1 35 0 1079 204 18 18 chr10 1772227 1772507 -138544258 + L1 LINE L1 4000 4279 -1867 322 337 69 31 chr10 1772552 1772843 -138543922 - L1MC3 LINE L1 -1863 5094 4793 249 280 94 24 chr10 1772912 1773241 -138543524 - L1MC3 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1773276 1773367 -138543398 + (TA)n Simple_repeat Simple_repeat 2 94 0 242 276 25 45 chr10 1773392 1773591 -138543174 - L1MC3 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1773925 1773961 -138542804 + AT_rich Low_complexity Low_complexity 1 36 0 1353 167 85 35 chr10 1774000 1774282 -138542483 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1775089 1775138 -138541627 + AT_rich Low_complexity Low_complexity 1 49 0 2385 26 0 13 chr10 1776123 1776427 -138540338 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1776427 1776654 -138540111 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1778832 1778863 -138537902 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1780155 1780282 -138536483 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1780340 1780623 -138536142 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1780988 1781238 -138535527 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1781556 1781577 -138535188 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1782380 1782401 -138534364 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1783416 1784094 -138532671 - L1MC3 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1784535 1785056 -138531709 - L1MC3 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1785064 1785366 -138531399 - L1MC3 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1785397 1785486 -138531279 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1785721 1786176 -138530589 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1789421 1789797 -138526968 - L1MC3 LINE L1 -6086 773 375 233 296 20 0 chr10 1789913 1790011 -138526754 - L1MC3 LINE L1 -6457 402 303 2097 118 28 0 chr10 1790193 1790480 -138526285 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1790947 1790999 -138525766 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1791526 1791548 -138525217 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1792401 1792686 -138524079 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1793681 1793966 -138522799 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1796614 1796636 -138520129 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1796638 1796941 -138519824 + AluSx SINE Alu 1 302 -10 254 226 0 10 chr10 1797126 1797228 -138519537 + (CAT)n Simple_repeat Simple_repeat 2 102 0 4475 211 50 16 chr10 1798188 1799327 -138517438 + L1MC2 LINE L1 19 1196 -5230 6861 240 34 41 chr10 1799333 1799737 -138517028 + L1MC2 LINE L1 2756 3161 -3463 2099 150 3 6 chr10 1799737 1800050 -138516715 + AluSx SINE Alu 1 312 0 6861 240 34 41 chr10 1800050 1802288 -138514477 + L1MC2 LINE L1 3161 5365 -1259 2195 98 10 14 chr10 1802288 1802583 -138514182 - AluSg1 SINE Alu -15 294 1 6861 240 34 41 chr10 1802583 1803386 -138513379 + L1MC2 LINE L1 5365 6172 -452 2554 180 19 6 chr10 1803386 1803903 -138512862 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 1804996 1805025 -138511740 + AT_rich Low_complexity Low_complexity 1 29 0 7254 39 2 2 chr10 1805324 1806572 -138510193 - L1PA5 LINE L1 -4 6150 4904 260 322 63 24 chr10 1806816 1807071 -138509694 + MLT2E LTR ERVL 342 606 -22 2215 116 0 0 chr10 1807648 1807940 -138508825 + AluSx SINE Alu 5 296 -16 612 211 7 26 chr10 1809848 1810000 -138506765 + MLT2B2 LTR ERVL 1 149 -366 1491 243 39 0 chr10 1810299 1810711 -138506054 + MLT2B1 LTR ERVL 91 518 -2 222 37 0 0 chr10 1811125 1811152 -138505613 + (CA)n Simple_repeat Simple_repeat 1 27 0 2002 145 3 0 chr10 1811183 1811490 -138505275 + AluSx SINE Alu 1 308 0 1389 239 19 3 chr10 1813309 1813681 -138503084 - MLT1B LTR MaLR -7 383 6 364 259 130 12 chr10 1813734 1813896 -138502869 + MLT1G1 LTR MaLR 27 207 -388 788 118 8 0 chr10 1815154 1815281 -138501484 + (TTCC)n Simple_repeat Simple_repeat 2 129 0 7457 135 2 1 chr10 1815317 1816533 -138500232 + L1P LINE L1 3518 4735 -1411 252 0 0 0 chr10 1817127 1817155 -138499610 + (T)n Simple_repeat Simple_repeat 1 28 0 246 266 0 0 chr10 1817765 1817844 -138498921 + (CA)n Simple_repeat Simple_repeat 1 79 0 345 269 128 13 chr10 1818940 1819089 -138497676 - L1MC/D LINE L1 -2332 5476 5311 21 36 0 0 chr10 1819099 1819127 -138497638 + AT_rich Low_complexity Low_complexity 1 28 0 209 204 0 61 chr10 1819326 1819375 -138497390 - L2 LINE L2 -81 3232 3187 279 318 29 6 chr10 1819917 1820090 -138496675 + L1MC4a LINE L1 5731 5907 -437 345 301 33 20 chr10 1820124 1820277 -138496488 + L1ME1 LINE L1 5991 6145 -21 403 243 130 40 chr10 1820285 1820462 -138496303 + L1MC4a LINE L1 6171 6363 -1445 314 165 37 11 chr10 1820616 1820712 -138496053 + L1MC4a LINE L1 6523 6615 -1193 425 317 20 24 chr10 1820832 1821094 -138495671 + L1MC4a LINE L1 6587 6904 -939 2279 263 58 22 chr10 1821233 1822957 -138493808 + L1MCb LINE L1 122 2019 -4545 6186 275 50 29 chr10 1823108 1823399 -138493366 + L1MCb LINE L1 2305 2588 -4090 2722 31 0 0 chr10 1823399 1823719 -138493046 - L1PA4 LINE L1 -3 6152 5833 6186 275 50 29 chr10 1823719 1825340 -138491425 + L1MCb LINE L1 2588 4174 -2504 1614 170 0 47 chr10 1825340 1825658 -138491107 + AluJb SINE Alu 8 310 -2 6186 275 50 29 chr10 1825658 1827291 -138489474 + L1MCb LINE L1 4174 5920 -758 2300 111 0 0 chr10 1827438 1827744 -138489021 - AluSq SINE Alu -6 307 2 2195 96 7 0 chr10 1829584 1829887 -138486878 - AluSg SINE Alu -5 305 1 474 228 43 47 chr10 1830754 1830986 -138485779 - MER76 LTR ERV -457 231 1 601 333 51 30 chr10 1831002 1831338 -138485427 + L2 LINE L2 2261 2603 -711 343 325 32 0 chr10 1833322 1833448 -138483317 - MIR SINE MIR -117 145 16 28 107 0 0 chr10 1833789 1833901 -138482864 + AT_rich Low_complexity Low_complexity 1 112 0 299 234 0 39 chr10 1834299 1834376 -138482389 + GA-rich Low_complexity Low_complexity 3 76 0 1378 216 28 48 chr10 1834774 1834958 -138481807 + MLT1C LTR MaLR 1 187 -280 2544 74 0 0 chr10 1834958 1835269 -138481496 + AluY SINE Alu 1 311 0 1378 216 28 48 chr10 1835269 1835546 -138481219 + MLT1C LTR MaLR 187 453 -14 461 299 65 23 chr10 1836326 1836677 -138480088 - LTR16C LTR ERVL -2 489 124 1873 143 0 34 chr10 1837192 1837516 -138479249 - AluSx SINE Alu 0 314 1 224 291 0 0 chr10 1838029 1838084 -138478681 + L2 LINE L2 3253 3307 -6 205 161 0 0 chr10 1838086 1838117 -138478648 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2207 124 0 0 chr10 1838702 1839009 -138477756 + AluSg SINE Alu 1 307 -3 216 314 0 0 chr10 1844558 1844628 -138472137 + A-rich Low_complexity Low_complexity 2 71 0 204 245 0 0 chr10 1844729 1844778 -138471987 + A-rich Low_complexity Low_complexity 1 49 0 1843 158 0 7 chr10 1845453 1845756 -138471009 - AluJo SINE Alu -11 301 1 700 193 0 8 chr10 1845975 1846094 -138470671 + AluJb SINE Alu 12 129 -183 327 203 0 0 chr10 1846423 1846492 -138470273 + (CA)n Simple_repeat Simple_repeat 2 70 0 2843 200 38 22 chr10 1846518 1847233 -138469532 - ERVL LTR ERVL -1934 3830 3105 318 50 0 0 chr10 1847239 1847279 -138469486 + (CA)n Simple_repeat Simple_repeat 2 41 0 798 251 45 0 chr10 1847294 1847517 -138469248 - MLT2C2 LTR ERVL -231 233 1 1602 179 55 10 chr10 1847544 1847834 -138468931 + AluJb SINE Alu 1 303 -9 313 322 43 6 chr10 1848357 1848693 -138468072 + L1ME LINE L1 5155 5501 -663 2293 108 0 0 chr10 1848988 1849285 -138467480 - AluSq SINE Alu -16 297 1 225 0 0 0 chr10 1849405 1849430 -138467335 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 184 299 62 31 chr10 1851038 1851135 -138465630 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 1851398 1851526 -138465239 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 1851649 1852121 -138464644 - MLT2A2 LTR ERVL -81 461 1 936 225 55 37 chr10 1852415 1852795 -138463970 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 1853108 1853145 -138463620 + (TAA)n Simple_repeat Simple_repeat 3 39 0 457 257 0 0 chr10 1853147 1853260 -138463505 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 1853753 1853819 -138462946 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 1853824 1854016 -138462749 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 1857392 1857446 -138459319 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 1857983 1858336 -138458429 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 1858364 1858639 -138458126 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 1861433 1861473 -138455292 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 1861768 1861803 -138454962 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 1862522 1862684 -138454081 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 1862809 1862839 -138453926 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 1863370 1863631 -138453134 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 1863936 1864076 -138452689 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 1864776 1864971 -138451794 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 1865160 1865182 -138451583 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 1867130 1867432 -138449333 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 1870013 1870041 -138446724 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 1870075 1870236 -138446529 + MER2 DNA MER2_type 3 163 -182 363 307 85 28 chr10 1872678 1872890 -138443875 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1874462 1874495 -138442270 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1875036 1875167 -138441598 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1875192 1875651 -138441114 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1877299 1877462 -138439303 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1878451 1878483 -138438282 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1878603 1878633 -138438132 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1879304 1879641 -138437124 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1879834 1880001 -138436764 - AluJb SINE Alu -9 303 137 192 40 0 0 chr10 1880671 1880696 -138436069 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1881158 1881204 -138435561 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1881692 1881987 -138434778 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1883716 1883817 -138432948 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1883901 1884142 -138432623 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1884210 1884417 -138432348 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1885668 1887237 -138429528 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1887669 1887855 -138428910 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1888392 1888478 -138428287 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1888550 1889103 -138427662 - L1PA7 LINE L1 -7 6147 5572 208 312 9 64 chr10 1890014 1890123 -138426642 + MIR SINE MIR 45 147 -61 216 319 104 52 chr10 1890774 1890909 -138425856 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1891880 1892485 -138424280 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1892502 1892542 -138424223 + L1MB4 LINE L1 6139 6178 -2 371 73 18 0 chr10 1892543 1892598 -138424167 - Alu SINE Alu -1 300 245 2324 96 0 0 chr10 1892716 1893018 -138423747 - AluY SINE Alu -8 303 2 207 0 0 0 chr10 1893617 1893640 -138423125 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1893810 1894029 -138422736 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1895127 1895228 -138421537 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1895329 1895483 -138421282 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1896519 1896571 -138420194 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1897129 1897182 -138419583 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1897215 1897395 -138419370 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1897409 1897882 -138418883 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1723 177 0 19 chr10 1898011 1898322 -138418443 + AluJb SINE Alu 7 311 -1 302 80 20 0 chr10 1899242 1899292 -138417473 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1899325 1899391 -138417374 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1899901 1899936 -138416829 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1900368 1900501 -138416264 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1900998 1901112 -138415653 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1901124 1901300 -138415465 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1901579 1901592 -138415173 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1901592 1901943 -138414822 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1901943 1902109 -138414656 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1902664 1902970 -138413795 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1904330 1904412 -138412353 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1904955 1904979 -138411786 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1904990 1905505 -138411260 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1905541 1905670 -138411095 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1907175 1907251 -138409514 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1907256 1907284 -138409481 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1907344 1907475 -138409290 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1908543 1908679 -138408086 + AluSq/x SINE Alu 1 133 -179 2123 126 0 31 chr10 1908681 1908998 -138407767 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1910016 1910364 -138406401 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1911152 1911196 -138405569 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1911780 1912213 -138404552 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1912217 1912651 -138404114 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1912651 1912936 -138403829 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 1912936 1913174 -138403591 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 1913245 1913593 -138403172 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 1913604 1914074 -138402691 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 1914117 1914194 -138402571 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 1915003 1915031 -138401734 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 1915127 1915482 -138401283 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 1915714 1916020 -138400745 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 1916248 1916284 -138400481 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 1917748 1917986 -138398779 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 1919667 1920019 -138396746 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 1920797 1920865 -138395900 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 1920865 1921057 -138395708 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 1921057 1921384 -138395381 - AluSx SINE Alu -66 523 1 21 0 0 0 chr10 1923233 1923254 -138393511 + AT_rich Low_complexity Low_complexity 1 21 0 1935 174 12 26 chr10 1923254 1923678 -138393087 - L1MA7 LINE L1 0 6291 5874 2004 116 17 33 chr10 1923964 1924265 -138392500 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1924579 1924663 -138392102 + (TA)n Simple_repeat Simple_repeat 2 85 0 1471 134 138 79 chr10 1925226 1925517 -138391248 - AluJb SINE Alu -4 308 1 351 286 64 26 chr10 1925887 1926153 -138390612 + MLT1H LTR MaLR 72 347 -202 263 116 0 0 chr10 1926239 1926282 -138390483 + MLT1H LTR MaLR 485 527 -22 253 359 0 9 chr10 1926577 1926683 -138390082 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1928550 1928578 -138388187 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 389 300 47 107 chr10 1929087 1929387 -138387378 + L1ME3 LINE L1 248 529 -6078 1203 284 55 22 chr10 1929470 1930105 -138386660 + L1ME1 LINE L1 5506 6161 -5 978 236 28 31 chr10 1930113 1930486 -138386279 + L1ME3 LINE L1 1741 2212 -4395 343 343 76 4 chr10 1930491 1930742 -138386023 + L1ME3 LINE L1 2238 2506 -4101 2190 285 90 32 chr10 1930757 1930794 -138385971 + L1ME3 LINE L1 3696 3729 -2697 1850 124 16 0 chr10 1930794 1931052 -138385713 + AluSq SINE Alu 34 295 -18 2190 285 90 32 chr10 1931052 1932777 -138383988 + L1ME3 LINE L1 3729 5560 -866 937 231 25 32 chr10 1932847 1933163 -138383602 + L1ME3 LINE L1 5573 5886 -558 25 51 0 0 chr10 1933324 1933363 -138383402 + AT_rich Low_complexity Low_complexity 1 39 0 6074 137 7 1 chr10 1933380 1934596 -138382169 - L1PB1 LINE L1 -1 6150 4925 790 266 113 11 chr10 1934597 1934950 -138381815 + L1ME3 LINE L1 6036 6424 -18 2477 70 0 0 chr10 1935180 1935481 -138381284 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1935695 1935737 -138381028 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1936596 1936660 -138380105 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 236 337 18 6 chr10 1936871 1937034 -138379731 - L1MCc LINE L1 -5098 1325 1161 2255 93 7 0 chr10 1937719 1938008 -138378757 - AluSx SINE Alu -21 291 1 562 240 0 0 chr10 1938764 1938893 -138377872 - L1PB4 LINE L1 -5 6151 6023 249 196 0 0 chr10 1939079 1939130 -138377635 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1939931 1939977 -138376788 + AT_rich Low_complexity Low_complexity 1 46 0 226 188 62 10 chr10 1990348 1990444 -138326321 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 322 328 95 43 chr10 1990457 1990710 -138326055 + L1M2 LINE L1 537 802 -6047 2120 129 8 6 chr10 1990772 1991128 -138325637 + MER4D LTR ERV1 547 903 0 1176 134 18 80 chr10 1991232 1991456 -138325309 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 1991457 1991524 -138325241 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 514 300 57 17 chr10 1991762 1992062 -138324703 - L1ME3A LINE L1 -301 5869 5558 368 320 22 67 chr10 1992077 1992130 -138324635 - L1ME3A LINE L1 -875 5271 5217 2048 115 7 3 chr10 1992130 1992416 -138324349 - AluSq SINE Alu -26 287 1 368 320 22 67 chr10 1992416 1992587 -138324178 - L1ME3A LINE L1 -929 5217 5057 336 48 0 0 chr10 1992688 1992730 -138324035 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 319 39 16 chr10 1992765 1992947 -138323818 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 1993099 1993120 -138323645 + AT_rich Low_complexity Low_complexity 1 21 0 523 86 0 0 chr10 1993167 1993237 -138323528 - U6 snRNA snRNA 0 107 38 281 314 88 10 chr10 1993239 1993443 -138323322 - L1ME3A LINE L1 -1369 4777 4558 409 276 113 33 chr10 1993447 1993748 -138323017 - L1ME3A LINE L1 -2458 3688 3364 993 259 82 22 chr10 1993794 1994600 -138322165 - L1M4 LINE L1 -1390 5254 4362 356 137 0 82 chr10 1994725 1994798 -138321967 - MSTD LTR MaLR -328 68 2 249 233 0 0 chr10 1994799 1994859 -138321906 - L1P LINE L1 -2351 3795 3736 32 43 0 0 chr10 1994894 1994940 -138321825 + AT_rich Low_complexity Low_complexity 1 46 0 804 276 46 39 chr10 1995037 1995287 -138321478 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 1995287 1995314 -138321451 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 804 276 46 39 chr10 1995314 1995497 -138321268 - L1M4 LINE L1 -4799 1847 1667 * 1769 272 25 53 chr10 1995494 1996251 -138320514 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 1996311 1996353 -138320412 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 475 316 67 98 chr10 1998034 1998275 -138318490 + HAL1 LINE L1 22 269 -2238 1721 177 17 7 chr10 1998275 1998574 -138318191 + AluJb SINE Alu 3 304 -8 475 316 67 98 chr10 1998574 1998675 -138318090 + HAL1 LINE L1 269 372 -2135 1183 246 33 87 chr10 1998675 1999225 -138317540 + MLT2B1 LTR ERVL 1 520 0 475 316 67 98 chr10 1999225 1999419 -138317346 + HAL1 LINE L1 372 542 -1965 300 339 62 14 chr10 1999499 1999791 -138316974 + HAL1 LINE L1 630 935 -1572 781 167 24 0 chr10 1999800 1999926 -138316839 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 1999927 1999952 -138316813 + (GA)n Simple_repeat Simple_repeat 2 26 0 547 278 147 42 chr10 1999961 2000089 -138316676 + HAL1 LINE L1 965 1078 -1429 2438 53 7 7 chr10 2000089 2000391 -138316374 + AluY SINE Alu 1 302 -9 547 278 147 42 chr10 2000391 2000568 -138316197 + HAL1 LINE L1 1078 1302 -1205 667 295 56 36 chr10 2000590 2000980 -138315785 + HAL1 LINE L1 1483 1880 -627 382 270 46 66 chr10 2001416 2001612 -138315153 + L1MC4a LINE L1 5574 5765 -2043 433 182 34 7 chr10 2001618 2001766 -138314999 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1196 133 0 0 chr10 2001858 2002031 -138314734 - AluSg/x SINE Alu -3 309 137 324 181 0 56 chr10 2002032 2002104 -138314661 - AluJ/FLAM SINE Alu -234 68 1 306 252 102 24 chr10 2002105 2002232 -138314533 + L1MC4a LINE L1 5843 5979 -1829 4947 37 2 0 chr10 2002589 2003179 -138313586 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2004108 2004144 -138312621 + (CATA)n Simple_repeat Simple_repeat 2 37 0 635 44 0 22 chr10 2006942 2007032 -138309733 + L1PA5 LINE L1 6064 6151 -3 727 99 99 0 chr10 2007033 2007154 -138309611 + L1PA16 LINE L1 6025 6157 -9 4539 228 54 65 chr10 2007210 2008154 -138308611 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2008154 2008174 -138308591 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4539 228 54 65 chr10 2008174 2008313 -138308452 - L1MC3 LINE L1 -965 6820 6681 1323 161 150 29 chr10 2008313 2008587 -138308178 + AluSg1 SINE Alu 1 307 -2 4539 228 54 65 chr10 2008587 2009258 -138307507 - L1MC3 LINE L1 -1104 6681 6037 1764 176 0 23 chr10 2009780 2010087 -138306678 - AluJo SINE Alu -12 300 1 372 328 174 44 chr10 2010954 2011570 -138305195 - L1MEd LINE L1 -5218 901 206 247 329 84 16 chr10 2012048 2012358 -138304407 + L1MC4 LINE L1 7270 7600 -442 364 301 117 20 chr10 2012406 2012602 -138304163 + L1MC4 LINE L1 7687 7901 -141 189 0 0 0 chr10 2012604 2012625 -138304140 + (TA)n Simple_repeat Simple_repeat 1 21 0 209 225 28 14 chr10 2012662 2012733 -138304032 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2012807 2012842 -138303923 + AT_rich Low_complexity Low_complexity 1 35 0 608 326 80 32 chr10 2012985 2013379 -138303386 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2013379 2013569 -138303196 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 608 326 80 32 chr10 2013569 2013647 -138303118 - L2 LINE L2 -423 2890 2817 219 350 8 26 chr10 2013769 2013886 -138302879 - MER5B DNA MER1_type -60 118 4 330 234 215 24 chr10 2013913 2014118 -138302647 - L2 LINE L2 -534 2780 2537 1192 252 22 11 chr10 2014155 2014520 -138302245 + MLT1A2 LTR MaLR 6 374 0 337 288 123 6 chr10 2014527 2014690 -138302075 - L2 LINE L2 -803 2511 2330 509 96 0 48 chr10 2015976 2016008 -138300757 + MADE1 DNA Mariner 2 34 -46 2376 78 0 44 chr10 2016008 2016328 -138300437 - AluY SINE Alu -5 306 1 509 96 0 48 chr10 2016328 2016378 -138300387 + MADE1 DNA Mariner 34 80 0 225 354 50 43 chr10 2016524 2016685 -138300080 + MIR SINE MIR 76 237 -25 2134 113 0 0 chr10 2018142 2018424 -138298341 - AluSx SINE Alu -30 282 1 329 287 21 64 chr10 2020027 2020215 -138296550 + L2 LINE L2 3031 3210 -103 2624 77 34 0 chr10 2020933 2021284 -138295481 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2023467 2023620 -138293145 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2024361 2024384 -138292381 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2025043 2025218 -138291547 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2026835 2026864 -138289901 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2026871 2027671 -138289094 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2027671 2027984 -138288781 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2027984 2028032 -138288733 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2028178 2028572 -138288193 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2031100 2031142 -138285623 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2031153 2031525 -138285240 + MSTA LTR MaLR 2 427 -1 1491 196 11 0 chr10 2031525 2031801 -138284964 - AluJb SINE Alu -33 279 1 22 0 0 0 chr10 2032729 2032751 -138284014 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2032808 2033400 -138283365 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2033570 2034014 -138282751 - MSTB2 LTR MaLR -2 455 7 1223 229 107 33 chr10 2034369 2034705 -138282060 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2035766 2035942 -138280823 + L2 LINE L2 2229 2411 -903 451 205 25 19 chr10 2036006 2036167 -138280598 + CT-rich Low_complexity Low_complexity 2 163 0 518 304 136 50 chr10 2036238 2036887 -138279878 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2037388 2037612 -138279153 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2037621 2037704 -138279061 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2037710 2037908 -138278857 - MLT1A1 LTR MaLR -171 194 1 1348 231 54 0 chr10 2037925 2038276 -138278489 - L1MC3 LINE L1 0 7785 7416 * 2134 245 52 60 chr10 2038273 2038996 -138277769 - L1MC3 LINE L1 -1098 6687 5971 1551 184 33 23 chr10 2038996 2039295 -138277470 - AluJb SINE Alu -10 302 1 2134 245 52 60 chr10 2039295 2039490 -138277275 - L1MC3 LINE L1 -1814 5971 5776 2795 178 20 79 chr10 2039752 2040400 -138276365 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2040658 2041192 -138275573 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2042192 2042932 -138273833 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2044413 2044457 -138272308 + AT_rich Low_complexity Low_complexity 1 44 0 1297 185 30 26 chr10 2046051 2046179 -138270586 + AluJo SINE Alu 1 127 -185 185 83 28 0 chr10 2046179 2046215 -138270550 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2046215 2046388 -138270377 + AluJo SINE Alu 127 303 -9 2119 190 33 13 chr10 2047003 2047397 -138269368 + MER57A LTR ERV1 1 402 -1 24 0 0 0 chr10 2048140 2048164 -138268601 + AT_rich Low_complexity Low_complexity 1 24 0 704 196 42 0 chr10 2048373 2048516 -138268249 - L1MB1 LINE L1 -1 6167 6019 855 161 0 60 chr10 2048570 2048769 -138267996 + L1MA4 LINE L1 6108 6294 -6 285 344 0 0 chr10 2048849 2048942 -138267823 - MIR SINE MIR -64 144 52 222 164 49 16 chr10 2049464 2049525 -138267240 + (CATAA)n Simple_repeat Simple_repeat 3 65 0 239 311 118 7 chr10 2049537 2049672 -138267093 - MIR SINE MIR -3 259 110 989 138 20 31 chr10 2049717 2049912 -138266853 - L1MA4 LINE L1 0 6300 6108 1955 53 0 0 chr10 2049922 2050150 -138266615 + L1PA5 LINE L1 5927 6154 0 728 201 49 0 chr10 2050198 2050342 -138266423 + L1MB1 LINE L1 6017 6167 -1 1223 207 48 42 chr10 2050344 2050721 -138266044 - MLT1D LTR MaLR -106 399 21 764 206 12 0 chr10 2050738 2050908 -138265857 + L1MC1 LINE L1 4727 4898 -1248 1392 301 52 7 chr10 2050910 2051504 -138265261 - L1M4 LINE L1 -1384 4762 4142 315 379 15 15 chr10 2052973 2053242 -138263523 - ERVL LTR ERVL -2260 3504 3236 212 0 36 0 chr10 2053508 2053536 -138263229 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr10 2055933 2055974 -138260791 + AT_rich Low_complexity Low_complexity 1 41 0 652 200 205 0 chr10 2056400 2056595 -138260170 - MER46A DNA MER2_type 0 236 2 914 153 10 89 chr10 2057060 2057263 -138259502 + AluJb SINE Alu 121 307 -5 5530 174 26 17 chr10 2057263 2057671 -138259094 + L1MC1 LINE L1 5207 5610 -723 2007 212 15 5 chr10 2057671 2058062 -138258703 + MSTD LTR MaLR 2 396 0 5530 174 26 17 chr10 2058062 2058762 -138258003 + L1MC1 LINE L1 5610 6328 -5 837 214 0 6 chr10 2059191 2059359 -138257406 - MER44D DNA MER2_type 0 705 539 1218 218 29 39 chr10 2059476 2059783 -138256982 + MLT2B3 LTR ERVL 251 554 0 * 2029 221 0 3 chr10 2059783 2060160 -138256605 - MER44D DNA MER2_type -166 439 9 800 363 148 9 chr10 2060411 2061249 -138255516 + L2 LINE L2 1716 2669 -645 683 250 51 21 chr10 2061269 2061534 -138255231 + MER58 DNA MER1_type 18 2384 -36 1910 139 30 3 chr10 2061538 2061833 -138254932 - AluSx SINE Alu -9 303 1 286 224 142 30 chr10 2061894 2062028 -138254737 + L2 LINE L2 2653 2801 -513 190 301 124 42 chr10 2062164 2062201 -138254564 + L2 LINE L2 2804 2837 -476 1077 229 47 28 chr10 2062201 2062564 -138254201 - MLT1A2 LTR MaLR -4 370 1 190 301 124 42 chr10 2062564 2062945 -138253820 + L2 LINE L2 2837 3298 -15 225 346 77 10 chr10 2064117 2064221 -138252544 + L2 LINE L2 3162 3272 0 722 188 33 12 chr10 2064395 2064565 -138252200 + MLT1A1 LTR MaLR 215 405 -4 21 0 0 0 chr10 2064919 2064940 -138251825 + AT_rich Low_complexity Low_complexity 1 21 0 1250 183 57 103 chr10 2065058 2065359 -138251406 + AluJb SINE Alu 2 288 -14 2090 128 3 7 chr10 2065944 2066242 -138250523 + AluSx SINE Alu 14 310 -2 22 0 0 0 chr10 2066951 2066973 -138249792 + AT_rich Low_complexity Low_complexity 1 22 0 252 168 69 46 chr10 2067931 2068104 -138248661 + (AAGTG)n Simple_repeat Simple_repeat 4 180 0 355 254 58 96 chr10 2068272 2068387 -138248378 + L1ME3 LINE L1 5865 5983 -187 2301 101 10 0 chr10 2068387 2068693 -138248072 + AluSx SINE Alu 1 309 -3 355 254 58 96 chr10 2068693 2068881 -138247884 + L1ME3 LINE L1 5983 6170 0 228 200 0 0 chr10 2070477 2070547 -138246218 + (TA)n Simple_repeat Simple_repeat 1 70 0 186 337 61 18 chr10 2071432 2071595 -138245170 + MIR SINE MIR 23 192 -70 208 219 78 16 chr10 2071636 2071700 -138245065 + L3 LINE CR1 206 273 -1304 1817 168 21 71 chr10 2071773 2072155 -138244610 + THE1B LTR MaLR 1 363 -1 2087 273 41 19 chr10 2072632 2073361 -138243404 - L1ME1 LINE L1 -4 6162 5418 216 336 14 41 chr10 2073720 2073780 -138242985 - MIR SINE MIR -10 252 192 2172 125 7 0 chr10 2073780 2074076 -138242689 - AluSx SINE Alu -14 298 1 216 336 14 41 chr10 2074076 2074161 -138242604 - MIR SINE MIR -70 192 111 22 0 0 0 chr10 2074209 2074231 -138242534 + AT_rich Low_complexity Low_complexity 1 22 0 1294 222 34 54 chr10 2075432 2075910 -138240855 - L1M4 LINE L1 -2927 3219 2752 3312 247 84 38 chr10 2075912 2077802 -138238963 + L1MC/D LINE L1 3729 5716 -766 1242 146 6 1 chr10 2077903 2080204 -138236561 - ALR/Alpha Satellite centromeric 0 2313 1 1217 159 10 1 chr10 2080304 2083543 -138233222 - ALR/Alpha Satellite centromeric 0 3268 1 1469 201 99 3 chr10 2084544 2084877 -138231888 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2085473 2085541 -138231224 + CT-rich Low_complexity Low_complexity 5 71 0 493 355 37 25 chr10 2086077 2086401 -138230364 + L1MEc LINE L1 45 372 -6024 368 284 133 33 chr10 2086745 2086956 -138229809 + L1MEc LINE L1 786 1017 -5379 1931 286 119 53 chr10 2086982 2088160 -138228605 + L1MCc LINE L1 17 1307 -5116 1988 151 14 0 chr10 2088160 2088451 -138228314 - AluSx SINE Alu -17 295 1 1931 286 119 53 chr10 2088451 2088697 -138228068 + L1MCc LINE L1 1307 1535 -4888 303 336 7 14 chr10 2088722 2088868 -138227897 + L1MCc LINE L1 1552 1696 -5245 922 256 49 47 chr10 2089103 2089536 -138227229 + L1M4 LINE L1 4597 5033 -1113 2815 22 0 10 chr10 2089536 2089850 -138226915 + AluY SINE Alu 1 311 0 922 256 49 47 chr10 2089850 2089927 -138226838 + L1M4 LINE L1 5033 5108 -1038 2441 147 18 35 chr10 2090199 2090581 -138226184 + MSTA LTR MaLR 1 388 -40 2269 104 3 0 chr10 2090581 2090870 -138225895 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2090873 2090907 -138225858 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2441 147 18 35 chr10 2090907 2090955 -138225810 + MSTA LTR MaLR 390 428 0 228 283 0 0 chr10 2091232 2091292 -138225473 + L2 LINE L2 3254 3313 0 363 167 0 0 chr10 2092223 2092283 -138224482 - L1MA5 LINE L1 -220 6080 6021 1215 118 10 20 chr10 2092301 2092505 -138224260 + L1MA5 LINE L1 6095 6296 -4 208 364 39 34 chr10 2093167 2093373 -138223392 + L3 LINE CR1 249 455 -1122 27 73 0 0 chr10 2093897 2093952 -138222813 + AT_rich Low_complexity Low_complexity 1 55 0 1222 229 85 15 chr10 2094752 2095154 -138221611 + MER31B LTR ERV1 1 430 -36 344 233 282 6 chr10 2096285 2096448 -138220317 - L1MC4 LINE L1 -1115 6927 6720 366 231 8 34 chr10 2098053 2098170 -138218595 + MIR SINE MIR 12 125 -137 347 286 44 20 chr10 2098324 2098527 -138218238 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2098537 2098630 -138218135 + (TG)n Simple_repeat Simple_repeat 2 91 0 4998 213 37 25 chr10 2100833 2102398 -138214367 - L1MC1 LINE L1 -18 6298 4720 238 248 0 59 chr10 2102397 2102498 -138214267 - L1MC1 LINE L1 -1817 4312 4218 * 586 122 0 0 chr10 2102738 2102820 -138213945 + AluSg/x SINE Alu 212 293 -17 1439 234 30 55 chr10 2103106 2103581 -138213184 + MLT1C LTR MaLR 5 467 0 183 315 36 27 chr10 2103999 2104110 -138212655 - MIR3 SINE MIR -28 180 69 293 250 40 0 chr10 2104499 2104575 -138212190 + MER45A DNA AcHobo 99 177 -1 534 290 106 65 chr10 2106581 2106734 -138210031 - L1MC1 LINE L1 -4929 1381 1236 367 19 19 19 chr10 2106734 2106787 -138209978 + (CA)n Simple_repeat Simple_repeat 2 54 0 534 290 106 65 chr10 2106787 2107441 -138209324 - L1MC1 LINE L1 -5074 1236 520 22 56 0 0 chr10 2107846 2107882 -138208883 + AT_rich Low_complexity Low_complexity 1 36 0 334 207 49 12 chr10 2108024 2108106 -138208659 + LTR16A LTR ERVL 53 137 -313 250 269 34 42 chr10 2108210 2108329 -138208436 + LTR16A LTR ERVL 303 420 -30 1892 168 0 13 chr10 2108734 2109032 -138207733 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2109812 2109862 -138206903 + AT_rich Low_complexity Low_complexity 1 50 0 1733 71 0 0 chr10 2109942 2110153 -138206612 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2110154 2110240 -138206525 + MLT1A2 LTR MaLR 127 212 -162 2054 118 0 57 chr10 2110253 2110567 -138206198 + AluSx SINE Alu 3 298 -14 376 341 32 23 chr10 2110631 2110848 -138205917 + MIR SINE MIR 44 262 0 565 222 98 31 chr10 2111350 2111544 -138205221 + MER3 DNA MER1_type 3 209 0 1762 122 34 27 chr10 2111857 2112152 -138204613 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2113955 2113980 -138202785 + AT_rich Low_complexity Low_complexity 1 25 0 850 194 61 116 chr10 2114341 2114737 -138202028 - MLT1A2 LTR MaLR 0 374 1 687 299 119 13 chr10 2115411 2115799 -138200966 + MLT1G LTR MaLR 68 496 -94 914 300 35 25 chr10 2116408 2116811 -138199954 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2117139 2117162 -138199603 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2118641 2118838 -138197927 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 295 294 0 0 chr10 2119129 2119214 -138197551 - MIR SINE MIR -67 141 57 609 142 20 81 chr10 2120489 2120637 -138196128 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2121083 2121135 -138195630 + CT-rich Low_complexity Low_complexity 1 51 0 452 271 17 0 chr10 2121475 2121593 -138195172 - L2 LINE L2 -10 3262 3143 1507 180 58 6 chr10 2121854 2121999 -138194766 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2121999 2122032 -138194733 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1507 180 58 6 chr10 2122032 2122288 -138194477 - L1ME LINE L1 -848 5318 5043 2934 185 100 14 chr10 2122294 2122595 -138194170 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2122595 2122646 -138194119 + (TG)n Simple_repeat Simple_repeat 1 51 0 2934 185 100 14 chr10 2122646 2122993 -138193772 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2123034 2123097 -138193668 + (GGA)n Simple_repeat Simple_repeat 3 62 0 300 194 0 16 chr10 2123835 2123897 -138192868 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2124538 2125245 -138191520 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2125246 2125442 -138191323 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2125442 2126400 -138190365 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2127625 2127841 -138188924 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2128482 2128526 -138188239 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2128526 2128575 -138188190 + (TA)n Simple_repeat Simple_repeat 2 50 0 2199 125 29 35 chr10 2128577 2128954 -138187811 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2130181 2130588 -138186177 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2131408 2131648 -138185117 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2131848 2131883 -138184882 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2131910 2131984 -138184781 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2133336 2133609 -138183156 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2134845 2134878 -138181887 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2137732 2137760 -138179005 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2139116 2139242 -138177523 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2139285 2139455 -138177310 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2140234 2140256 -138176509 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2140403 2140518 -138176247 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2142740 2143045 -138173720 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2143164 2143408 -138173357 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2143834 2144123 -138172642 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2144145 2144167 -138172598 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2144189 2144225 -138172540 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2144342 2144654 -138172111 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2145387 2145465 -138171300 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2146678 2147035 -138169730 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2147726 2147905 -138168860 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2147905 2148213 -138168552 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2148213 2148417 -138168348 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2149063 2149775 -138166990 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2149775 2149839 -138166926 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2149855 2149937 -138166828 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2149937 2150010 -138166755 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2150010 2150181 -138166584 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2150811 2150966 -138165799 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2151298 2151449 -138165316 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2153680 2153705 -138163060 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2153797 2154106 -138162659 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2154204 2154231 -138162534 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2154231 2154390 -138162375 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2157073 2157365 -138159400 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2161086 2161341 -138155424 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2161341 2161567 -138155198 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2161567 2161705 -138155060 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2161785 2162063 -138154702 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2163223 2163399 -138153366 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2164292 2164409 -138152356 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2164935 2164997 -138151768 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2166572 2166866 -138149899 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2167151 2167304 -138149461 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2167496 2167678 -138149087 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2168488 2168548 -138148217 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2169414 2169447 -138147318 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2170006 2170590 -138146175 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2170601 2170787 -138145978 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2171413 2171443 -138145322 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2171931 2172188 -138144577 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2172190 2172328 -138144437 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2172595 2172639 -138144126 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2173083 2173174 -138143591 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2173188 2173343 -138143422 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2173430 2173711 -138143054 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2173956 2174111 -138142654 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2174111 2174416 -138142349 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2174416 2174757 -138142008 + MER75 DNA T2_type 156 500 -14 333 339 17 39 chr10 2174968 2175148 -138141617 - MER5B DNA MER1_type 0 178 3 3012 126 28 16 chr10 2176805 2177312 -138139453 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2177607 2177627 -138139138 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 384 239 68 106 chr10 2178704 2179026 -138137739 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2179552 2179584 -138137181 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2180053 2180085 -138136680 + AT_rich Low_complexity Low_complexity 1 32 0 1779 119 0 11 chr10 2180093 2180353 -138136412 + AluSc SINE Alu 1 257 -52 1690 132 60 0 chr10 2180970 2181289 -138135476 - L1MA5A LINE L1 0 6297 5960 654 235 130 72 chr10 2182914 2183259 -138133506 + MLT1D LTR MaLR 1 365 -140 2088 108 85 18 chr10 2183591 2183932 -138132833 + THE1B LTR MaLR 1 364 0 552 185 0 0 chr10 2186392 2186484 -138130281 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2187250 2187538 -138129227 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2188498 2188985 -138127780 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2188985 2189275 -138127490 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2189275 2189648 -138127117 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2190052 2190373 -138126392 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2190769 2191049 -138125716 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2191163 2191265 -138125500 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2191302 2191709 -138125056 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2192240 2192483 -138124282 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2192496 2192537 -138124228 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2193133 2193289 -138123476 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2193551 2193843 -138122922 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2194739 2194759 -138122006 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2194765 2195060 -138121705 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2195070 2195413 -138121352 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2195858 2197281 -138119484 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2197542 2197698 -138119067 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2197717 2197856 -138118909 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2197865 2198326 -138118439 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2198388 2198427 -138118338 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2199848 2199935 -138116830 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2200424 2200521 -138116244 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2200970 2201250 -138115515 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2201600 2201845 -138114920 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2201870 2201916 -138114849 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2201922 2202253 -138114512 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2202744 2203578 -138113187 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2203757 2203992 -138112773 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2204278 2204414 -138112351 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2206361 2206544 -138110221 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2206820 2206911 -138109854 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2206946 2206995 -138109770 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2207007 2207132 -138109633 + (TA)n Simple_repeat Simple_repeat 1 131 0 297 133 20 41 chr10 2207171 2207269 -138109496 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2207283 2207551 -138109214 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2207677 2207708 -138109057 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2209452 2209485 -138107280 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2209622 2210758 -138106007 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2210758 2211054 -138105711 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2211054 2211090 -138105675 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2211088 2211567 -138105198 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2211574 2212219 -138104546 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2212586 2212660 -138104105 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2213582 2213649 -138103116 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2213886 2214203 -138102562 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2214269 2214299 -138102466 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2215267 2215297 -138101468 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2217503 2218524 -138098241 - L1PA2 LINE L1 0 6155 5133 5001 191 32 20 chr10 2221197 2222776 -138093989 + L1MC1 LINE L1 4732 6331 -2 315 216 0 0 chr10 2222793 2222867 -138093898 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2223640 2223667 -138093098 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2223706 2223735 -138093030 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2224003 2224041 -138092724 + AT_rich Low_complexity Low_complexity 1 38 0 305 307 135 5 chr10 2224868 2225083 -138091682 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2225548 2225685 -138091080 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2225899 2225932 -138090833 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2226232 2226519 -138090246 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2226608 2226664 -138090101 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2226667 2226764 -138090001 + (CATG)n Simple_repeat Simple_repeat 2 102 0 * 354 297 0 0 chr10 2226744 2226889 -138089876 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2228230 2228765 -138088000 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2228983 2229079 -138087686 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2229829 2230186 -138086579 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2230404 2230425 -138086340 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2230566 2230721 -138086044 + (TA)n Simple_repeat Simple_repeat 1 167 0 299 333 33 39 chr10 2231278 2231614 -138085151 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2231946 2232329 -138084436 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2232329 2232355 -138084410 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2232539 2232894 -138083871 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2233860 2234054 -138082711 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2234054 2234417 -138082348 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2234417 2234525 -138082240 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2234733 2234939 -138081826 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2234979 2235116 -138081649 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2235833 2235866 -138080899 + AT_rich Low_complexity Low_complexity 1 33 0 256 314 8 40 chr10 2235919 2236043 -138080722 - L1MEc LINE L1 -4646 1750 1631 2403 74 3 7 chr10 2237147 2237457 -138079308 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2238469 2238756 -138078009 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2238829 2238864 -138077901 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2240021 2240263 -138076502 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2241485 2241730 -138075035 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2242381 2242402 -138074363 + AT_rich Low_complexity Low_complexity 1 21 0 2172 114 0 3 chr10 2244080 2244369 -138072396 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2244427 2244536 -138072229 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2244859 2244968 -138071797 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2245680 2245772 -138070993 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2245927 2246126 -138070639 - L1MC3 LINE L1 -21 7764 7560 2101 184 49 11 chr10 2246137 2246588 -138070177 + MER50 LTR ERV1 12 479 -255 1649 113 8 0 chr10 2246723 2246961 -138069804 + MER50 LTR ERV1 463 702 -32 2249 243 57 16 chr10 2246971 2247658 -138069107 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2247707 2247806 -138068959 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2247806 2248369 -138068396 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2249146 2249704 -138067061 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2249700 2249739 -138067026 + Alu SINE Alu 13 51 -249 * 486 211 0 46 chr10 2249753 2249862 -138066903 - LTR62 LTR ERVK -610 109 6 1434 211 97 50 chr10 2250530 2250994 -138065771 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2251488 2251704 -138065061 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2253150 2253180 -138063585 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2253188 2253325 -138063440 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2253680 2253708 -138063057 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2253986 2254072 -138062693 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2254074 2254304 -138062461 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2254318 2254485 -138062280 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2254552 2254718 -138062047 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2254762 2254917 -138061848 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2254987 2255152 -138061613 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2256011 2256322 -138060443 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2256359 2256739 -138060026 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2257803 2257947 -138058818 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2257952 2258141 -138058624 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2258142 2258163 -138058602 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2259079 2259443 -138057322 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2259676 2259701 -138057064 + AT_rich Low_complexity Low_complexity 1 25 0 2390 79 0 3 chr10 2261227 2261532 -138055233 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2261696 2261745 -138055020 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2262452 2262474 -138054291 + AT_rich Low_complexity Low_complexity 1 22 0 2319 136 101 20 chr10 2262689 2263085 -138053680 + MSTA LTR MaLR 1 428 0 541 284 84 37 chr10 2263526 2263847 -138052918 - MLT1I LTR MaLR -4 405 70 232 171 57 0 chr10 2263919 2263989 -138052776 + C-rich Low_complexity Low_complexity 3 76 0 248 276 66 83 chr10 2265606 2265749 -138051016 - HAL1b LINE L1 -2 1346 1202 273 75 0 0 chr10 2265749 2265789 -138050976 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 276 66 83 chr10 2265789 2266055 -138050710 - HAL1b LINE L1 -146 1202 944 1541 199 13 13 chr10 2266059 2266370 -138050395 + AluJb SINE Alu 1 311 -1 492 300 79 44 chr10 2266587 2266994 -138049771 - HAL1b LINE L1 -513 835 415 1394 45 0 6 chr10 2267094 2267273 -138049492 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1593 190 16 57 chr10 2267273 2267641 -138049124 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2268153 2268242 -138048523 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2268782 2268811 -138047954 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2269585 2269613 -138047152 + (CA)n Simple_repeat Simple_repeat 2 29 0 297 268 65 82 chr10 2269846 2270137 -138046628 - MLT1H LTR MaLR -214 335 50 2000 194 26 11 chr10 2272031 2272413 -138044352 + MLT1B LTR MaLR 3 390 0 813 136 0 15 chr10 2272556 2272688 -138044077 + AluJo SINE Alu 5 134 -178 692 220 0 0 chr10 2276819 2276960 -138039805 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2277042 2277240 -138039525 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2277491 2277522 -138039243 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2277873 2277894 -138038871 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2278515 2278684 -138038081 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2279006 2279329 -138037436 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2280014 2280322 -138036443 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2280563 2281411 -138035354 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2281405 2281537 -138035228 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2281557 2281611 -138035154 + (TA)n Simple_repeat Simple_repeat 1 53 0 268 74 0 37 chr10 2281898 2281915 -138034850 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2281915 2281936 -138034829 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2281936 2281972 -138034793 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2282010 2282104 -138034661 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2282112 2282139 -138034626 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2282196 2282236 -138034529 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2282468 2282569 -138034196 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2282617 2282695 -138034070 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2282696 2282738 -138034027 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2283372 2283481 -138033284 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2283546 2283829 -138032936 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2284271 2284383 -138032382 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2284961 2285269 -138031496 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2286599 2286695 -138030070 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2286724 2286912 -138029853 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2286927 2286972 -138029793 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2287244 2287307 -138029458 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2288194 2288430 -138028335 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2288565 2288876 -138027889 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2290191 2290854 -138025911 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2290854 2291127 -138025638 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2291127 2291611 -138025154 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2291642 2292229 -138024536 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2292229 2292573 -138024192 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2292573 2292903 -138023862 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2293451 2293481 -138023284 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2293508 2293544 -138023221 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2293813 2294020 -138022745 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2295143 2295186 -138021579 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2295819 2296013 -138020752 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2296355 2296407 -138020358 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2297609 2297709 -138019056 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2297914 2298086 -138018679 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2298086 2298111 -138018654 + (TA)n Simple_repeat Simple_repeat 2 26 0 290 243 100 67 chr10 2298111 2298148 -138018617 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2300091 2300115 -138016650 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2301556 2301631 -138015134 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2302059 2302323 -138014442 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2302499 2302582 -138014183 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2303034 2303264 -138013501 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2306521 2306668 -138010097 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2306680 2306852 -138009913 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2308547 2308718 -138008047 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2309129 2309157 -138007608 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2309603 2309848 -138006917 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2310005 2310670 -138006095 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2310857 2311276 -138005489 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2311339 2311528 -138005237 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2312106 2312138 -138004627 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2313336 2313836 -138002929 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2314627 2314942 -138001823 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2315298 2315406 -138001359 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2315411 2315890 -138000875 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2315900 2316047 -138000718 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2316494 2316815 -137999950 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2316966 2317374 -137999391 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2318105 2318531 -137998234 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2319097 2319417 -137997348 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2319421 2319490 -137997275 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2319768 2319884 -137996881 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2319900 2319923 -137996842 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2319925 2319976 -137996789 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 244 0 0 chr10 2319979 2320020 -137996745 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2320685 2320887 -137995878 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2322598 2322810 -137993955 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2322937 2323050 -137993715 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2323198 2323297 -137993468 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2323297 2323384 -137993381 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2323385 2323418 -137993347 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2323418 2323598 -137993167 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2323739 2323840 -137992925 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2324198 2324970 -137991795 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2328924 2329376 -137987389 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2329620 2329924 -137986841 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2330025 2330655 -137986110 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2330663 2330894 -137985871 - AluSg/x SINE Alu -10 302 71 914 176 109 0 chr10 2330902 2331112 -137985653 - L1MA4A LINE L1 -134 6169 5937 1936 221 43 37 chr10 2331117 2332233 -137984532 + L1MC/D LINE L1 4645 5773 -571 916 277 52 13 chr10 2332233 2332692 -137984073 - L1ME3A LINE L1 -3058 3506 3030 382 241 55 41 chr10 2332705 2332850 -137983915 - L1ME3A LINE L1 -5882 163 17 335 255 168 0 chr10 2332984 2333145 -137983620 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2333335 2333510 -137983255 + GA-rich Low_complexity Low_complexity 4 176 0 1380 231 66 52 chr10 2333819 2334421 -137982344 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2334818 2334848 -137981917 + (T)n Simple_repeat Simple_repeat 1 30 0 318 193 114 57 chr10 2335695 2335783 -137980982 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2335833 2335877 -137980888 + AT_rich Low_complexity Low_complexity 1 44 0 2738 23 0 0 chr10 2336801 2337109 -137979656 - AluYa5 SINE Alu -3 308 1 516 280 107 85 chr10 2337138 2337762 -137979003 + L1M4 LINE L1 4341 4978 -1168 1215 135 6 0 chr10 2338407 2338585 -137978180 - AluSq SINE Alu -1 312 134 399 284 245 29 chr10 2338600 2338673 -137978092 - L2 LINE L2 -1830 1484 1428 279 0 0 0 chr10 2338673 2338704 -137978061 + (TG)n Simple_repeat Simple_repeat 1 31 0 399 284 245 29 chr10 2338704 2338838 -137977927 - L2 LINE L2 -1886 1428 1232 1821 52 0 9 chr10 2339675 2339907 -137976858 + L1PA8 LINE L1 5930 6159 -13 293 306 25 64 chr10 2341383 2341540 -137975225 + MER5A DNA MER1_type 35 185 -4 1407 185 83 19 chr10 2341591 2341916 -137974849 + MER7A DNA MER2_type 1 344 -2 2264 68 0 17 chr10 2342386 2342679 -137974086 - AluY SINE Alu -23 288 1 257 267 27 0 chr10 2343376 2343451 -137973314 - HAL1 LINE L1 -616 1891 1815 1919 155 3 0 chr10 2343554 2343845 -137972920 + AluJb SINE Alu 1 292 -20 350 239 20 107 chr10 2344415 2344612 -137972153 - HAL1 LINE L1 -944 1563 1384 23 0 0 0 chr10 2345818 2345841 -137970924 + AT_rich Low_complexity Low_complexity 1 23 0 264 263 50 0 chr10 2346637 2346717 -137970048 + L1MC/D LINE L1 5805 5888 -1920 2027 204 24 5 chr10 2346721 2347137 -137969628 + MSTB LTR MaLR 1 424 -2 585 312 42 64 chr10 2347438 2347890 -137968875 + LTR16A1 LTR ERVL 16 457 0 759 180 0 16 chr10 2350519 2350702 -137966063 + (TG)n Simple_repeat Simple_repeat 1 180 0 1455 151 4 21 chr10 2351567 2351806 -137964959 - AluSg/x SINE Alu -7 305 71 668 244 51 25 chr10 2353465 2353662 -137963103 + L1MC3 LINE L1 40 241 -6155 * 1703 267 139 39 chr10 2353643 2353896 -137962869 + L1MC3 LINE L1 582 808 -5407 2216 109 3 3 chr10 2353896 2354207 -137962558 - AluSx SINE Alu -1 311 1 1703 267 139 39 chr10 2354207 2355916 -137960849 + L1MC3 LINE L1 808 2503 -3712 2759 243 67 23 chr10 2355917 2356869 -137959896 + L1MC3 LINE L1 4092 4604 -1611 1859 161 0 3 chr10 2356869 2357197 -137959568 + AluSx SINE Alu 1 327 0 2759 243 67 23 chr10 2357197 2358106 -137958659 + L1MC3 LINE L1 4604 5472 -743 2215 235 14 28 chr10 2358125 2358772 -137957993 + L1MC3 LINE L1 7210 7847 -7 244 357 9 27 chr10 2359121 2359167 -137957598 + MIR SINE MIR 1 46 -176 2367 110 0 0 chr10 2359167 2359476 -137957289 + AluSq SINE Alu 1 309 -4 244 357 9 27 chr10 2359476 2359592 -137957173 + MIR SINE MIR 46 154 -68 26 0 0 0 chr10 2360082 2360108 -137956657 + AT_rich Low_complexity Low_complexity 1 26 0 4463 119 14 14 chr10 2361042 2361732 -137955033 + LTR8 LTR ERV1 2 691 0 186 133 0 0 chr10 2361893 2361923 -137954842 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 2449 35 6 26 chr10 2362058 2362369 -137954396 - AluY SINE Alu -6 305 1 1011 190 26 4 chr10 2363589 2363821 -137952944 + MLT1B LTR MaLR 153 389 -1 274 105 0 0 chr10 2363910 2363948 -137952817 - Alu SINE Alu -263 38 1 261 0 0 0 chr10 2365122 2365151 -137951614 + (CA)n Simple_repeat Simple_repeat 1 29 0 1942 176 0 3 chr10 2365605 2365917 -137950848 - AluSx SINE Alu -1 311 1 1514 210 0 7 chr10 2366207 2366502 -137950263 - AluJo SINE Alu -19 293 1 1861 181 45 19 chr10 2366752 2367161 -137949604 - Tigger1 DNA MER2_type 0 2418 1999 1693 204 101 69 chr10 2367161 2367266 -137949499 - LTR9 LTR ERV1 0 612 512 2527 54 3 19 chr10 2367266 2367582 -137949183 + AluY SINE Alu 1 311 0 1693 204 101 69 chr10 2367582 2368069 -137948696 - LTR9 LTR ERV1 -100 512 1 * 9664 131 52 31 chr10 2368069 2368894 -137947871 - Tigger1 DNA MER2_type -419 1999 1193 2005 147 40 7 chr10 2368894 2369194 -137947571 - AluSx SINE Alu -2 310 1 9664 131 52 31 chr10 2369194 2370161 -137946604 - Tigger1 DNA MER2_type -1225 1193 170 2013 167 33 31 chr10 2370172 2370721 -137946044 + MLT2A2 LTR ERVL 1 554 0 757 133 44 0 chr10 2370721 2370855 -137945910 - Tigger1 DNA MER2_type -2255 163 24 27 29 0 0 chr10 2373111 2373145 -137943620 + AT_rich Low_complexity Low_complexity 1 34 0 205 204 61 34 chr10 2373277 2373424 -137943341 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 500 283 33 28 chr10 2373747 2373927 -137942838 - MIR SINE MIR -71 191 11 373 305 53 27 chr10 2374117 2374304 -137942461 - L2 LINE L2 -27 3286 3095 962 282 173 38 chr10 2374512 2375302 -137941463 - L2 LINE L2 -616 2698 1802 1240 194 19 0 chr10 2376372 2376629 -137940136 + L1PA16 LINE L1 5891 6155 -11 1793 137 4 0 chr10 2376629 2376892 -137939873 + AluSq SINE Alu 2 265 -48 28 29 0 0 chr10 2376903 2376938 -137939827 + AT_rich Low_complexity Low_complexity 1 35 0 181 0 0 0 chr10 2377346 2377366 -137939399 + (TTTTA)n Simple_repeat Simple_repeat 5 65 0 2005 135 0 0 chr10 2377366 2377647 -137939118 - AluSx SINE Alu -1 301 2 497 337 28 17 chr10 2378249 2378537 -137938228 - ERVL LTR ERVL -3253 2511 2221 255 248 157 81 chr10 2378720 2378930 -137937835 - ERVL LTR ERVL -3083 1913 1688 440 352 8 30 chr10 2378994 2379230 -137937535 - ERVL LTR ERVL -3449 1547 1317 24 0 0 0 chr10 2380181 2380205 -137936560 + AT_rich Low_complexity Low_complexity 1 24 0 816 251 78 31 chr10 2380936 2381368 -137935397 - MLT1E LTR MaLR 0 593 46 2146 120 0 10 chr10 2381787 2382070 -137934695 + AluSx SINE Alu 1 282 -30 234 0 0 0 chr10 2382070 2382096 -137934669 + (TA)n Simple_repeat Simple_repeat 2 27 0 2146 120 0 10 chr10 2382096 2382112 -137934653 + AluSx SINE Alu 282 297 -15 213 175 0 0 chr10 2382243 2382283 -137934482 + (TG)n Simple_repeat Simple_repeat 2 41 0 342 67 0 0 chr10 2383519 2383564 -137933201 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2383954 2384051 -137932714 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 277 239 8 90 chr10 2384432 2384503 -137932262 + MLT2C1 LTR ERVL 275 331 -66 2228 92 3 35 chr10 2384503 2384819 -137931946 - AluSx SINE Alu -6 306 1 277 239 8 90 chr10 2384819 2384881 -137931884 + MLT2C1 LTR ERVL 331 397 0 2251 123 0 0 chr10 2385469 2385779 -137930986 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2385812 2385842 -137930923 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 218 346 88 11 chr10 2386471 2386653 -137930112 + L2 LINE L2 2196 2391 -923 218 337 45 0 chr10 2386972 2387061 -137929704 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2387658 2387679 -137929086 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2387725 2387797 -137928968 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2387800 2387951 -137928814 + (TA)n Simple_repeat Simple_repeat 2 157 0 2063 99 7 7 chr10 2388080 2388362 -137928403 + AluSx SINE Alu 3 284 -28 1046 201 36 12 chr10 2388810 2389059 -137927706 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2392027 2392053 -137924712 + AT_rich Low_complexity Low_complexity 1 26 0 1502 161 8 0 chr10 2393111 2393347 -137923418 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2393363 2393386 -137923379 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1642 115 0 0 chr10 2393548 2393766 -137922999 - AluSx SINE Alu -94 218 1 803 216 72 53 chr10 2393767 2394160 -137922605 + L1MDb LINE L1 1320 1720 -4686 851 167 13 8 chr10 2394289 2394529 -137922236 + CT-rich Low_complexity Low_complexity 1 241 0 2184 290 23 14 chr10 2395085 2396198 -137920567 - L1ME1 LINE L1 -5 6161 5039 1105 255 22 3 chr10 2396201 2396519 -137920246 - MER33 DNA MER1_type 0 324 1 1574 242 62 87 chr10 2396528 2397685 -137919080 - L1ME1 LINE L1 -1112 5034 3917 231 274 12 24 chr10 2397986 2398070 -137918695 + GA-rich Low_complexity Low_complexity 1 83 0 383 324 42 9 chr10 2398314 2398530 -137918235 - MIR SINE MIR -32 230 8 350 298 9 18 chr10 2399223 2399337 -137917428 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2401197 2401235 -137915530 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2401691 2401778 -137914987 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2403699 2403752 -137913013 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2404021 2404049 -137912716 + AT_rich Low_complexity Low_complexity 1 28 0 488 294 124 19 chr10 2405288 2405829 -137910936 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2405859 2406169 -137910596 - L1ME1 LINE L1 -3461 2685 2370 2258 249 33 12 chr10 2406355 2407047 -137909718 - L1MC3 LINE L1 0 7785 7079 1193 241 68 29 chr10 2407053 2407468 -137909297 - L1MC3 LINE L1 -937 6848 6418 1536 166 3 66 chr10 2407481 2407770 -137908995 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2407907 2407960 -137908805 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2408016 2408037 -137908728 + AT_rich Low_complexity Low_complexity 1 21 0 1016 222 66 26 chr10 2408730 2409088 -137907677 - MLT2D LTR ERVL -94 426 1 542 103 0 0 chr10 2409138 2409216 -137907549 + MADE1 DNA Mariner 1 78 -2 2102 132 0 0 chr10 2410354 2410649 -137906116 - AluSq SINE Alu -18 295 1 528 283 0 0 chr10 2411221 2411366 -137905399 - MIR SINE MIR -36 226 82 1877 144 38 123 chr10 2411520 2411993 -137904772 - Tigger2 DNA MER2_type 0 2718 2 327 313 23 16 chr10 2412424 2412552 -137904213 - MIR SINE MIR -133 129 1 1349 247 42 37 chr10 2413689 2414256 -137902509 + L1MDa LINE L1 1849 2418 -4122 1433 137 0 0 chr10 2414404 2414609 -137902156 - AluSx SINE Alu -107 205 1 1531 166 13 42 chr10 2415189 2415304 -137901461 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2415304 2415356 -137901409 + (CA)n Simple_repeat Simple_repeat 1 52 0 1531 166 13 42 chr10 2415356 2415547 -137901218 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2415547 2415570 -137901195 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2416198 2416234 -137900531 + (T)n Simple_repeat Simple_repeat 1 36 0 337 289 37 44 chr10 2416413 2416686 -137900079 + LTR37B LTR ERV1 198 468 0 181 231 39 39 chr10 2417392 2417444 -137899321 - MIR3 SINE MIR -7 201 150 639 213 25 0 chr10 2417459 2417619 -137899146 + L1MCa LINE L1 1769 1932 -4494 2369 97 3 0 chr10 2417648 2417958 -137898807 + AluSq SINE Alu 1 311 -2 287 278 140 7 chr10 2418028 2418457 -137898308 + MLT1E1 LTR MaLR 25 513 -111 528 160 14 83 chr10 2418745 2418889 -137897876 - L1M LINE L1 -775 5393 5260 242 331 60 60 chr10 2418934 2419085 -137897680 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2419293 2419486 -137897279 - L2 LINE L2 -549 2765 2551 6119 257 45 45 chr10 2420082 2423510 -137893255 - L1M4 LINE L1 -973 5671 2243 301 189 42 63 chr10 2423621 2423716 -137893049 - L1M4 LINE L1 -5568 974 882 517 314 56 37 chr10 2423797 2424258 -137892507 - L1M4 LINE L1 -5673 869 400 28 0 0 0 chr10 2425433 2425461 -137891304 + AT_rich Low_complexity Low_complexity 1 28 0 7563 224 78 22 chr10 2425664 2426480 -137890285 - L1MC3 LINE L1 -16 7769 7001 234 91 0 0 chr10 2426480 2426513 -137890252 + (TG)n Simple_repeat Simple_repeat 2 34 0 7563 224 78 22 chr10 2426513 2428242 -137888523 - L1MC3 LINE L1 -784 7001 5083 337 105 0 18 chr10 2428383 2428440 -137888325 + MADE1 DNA Mariner 1 56 -24 227 349 40 0 chr10 2428821 2428947 -137887818 + LTR16A LTR ERVL 298 428 -22 2195 116 0 3 chr10 2428947 2429258 -137887507 - AluSx SINE Alu -2 310 1 223 353 72 43 chr10 2431500 2431707 -137885058 - MIR SINE MIR -49 213 1 208 323 46 39 chr10 2432540 2432670 -137884095 - L2 LINE L2 -10 3303 3173 387 267 11 39 chr10 2433929 2434109 -137882656 + L1MA9 LINE L1 6099 6273 -39 23 0 0 0 chr10 2434109 2434132 -137882633 + AT_rich Low_complexity Low_complexity 1 23 0 348 24 0 0 chr10 2435059 2435100 -137881665 + (TG)n Simple_repeat Simple_repeat 1 41 0 277 330 58 111 chr10 2435213 2435370 -137881395 + L2 LINE L2 1764 1928 -1386 2443 116 28 0 chr10 2435370 2435724 -137881041 - THE1B LTR MaLR 0 364 1 277 330 58 111 chr10 2435724 2436100 -137880665 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2437414 2437435 -137879330 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 683 89 0 89 chr10 2439059 2439182 -137877583 - MER57B LTR ERV1 0 434 323 1372 237 73 35 chr10 2439293 2439370 -137877395 - L1MD2 LINE L1 -13 6415 6342 2171 119 10 3 chr10 2439370 2439680 -137877085 - AluSq SINE Alu -1 312 1 1372 237 73 35 chr10 2439680 2440989 -137875776 - L1MD2 LINE L1 -86 6342 4909 1415 256 77 33 chr10 2441140 2441236 -137875529 - L1ME1 LINE L1 -18 6148 6058 1492 158 40 66 chr10 2441236 2441540 -137875225 + AluJo SINE Alu 1 296 -16 1415 256 77 33 chr10 2441540 2442076 -137874689 - L1ME1 LINE L1 -108 6058 5488 229 247 155 10 chr10 2442082 2442179 -137874586 - L1MD2 LINE L1 -6251 145 35 588 319 114 23 chr10 2442387 2442957 -137873808 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2443379 2443438 -137873327 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2443440 2443606 -137873159 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2443606 2443638 -137873127 + AT_rich Low_complexity Low_complexity 1 32 0 947 245 62 28 chr10 2444317 2444451 -137872314 + MLT1C LTR MaLR 53 181 -286 2232 117 7 0 chr10 2444451 2444758 -137872007 + AluSp SINE Alu 1 309 -4 947 245 62 28 chr10 2444758 2445023 -137871742 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2445610 2445632 -137871133 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2446382 2446409 -137870356 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1577 107 0 5 chr10 2446412 2446627 -137870138 - AluSg/x SINE Alu -22 290 77 748 255 59 17 chr10 2446733 2447023 -137869742 + MER33 DNA MER1_type 1 302 -22 224 379 137 5 chr10 2447196 2447407 -137869358 - MIR SINE MIR -19 243 5 2167 103 40 7 chr10 2450571 2450871 -137865894 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2451480 2451590 -137865175 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2451619 2451786 -137864979 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2452195 2452220 -137864545 + AT_rich Low_complexity Low_complexity 1 25 0 369 184 13 13 chr10 2452237 2452313 -137864452 - AluJ/FRAM SINE Alu -7 295 220 8012 26 0 0 chr10 2452334 2454052 -137862713 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2454799 2454837 -137861928 + (TG)n Simple_repeat Simple_repeat 2 39 0 521 282 130 6 chr10 2456624 2457155 -137859610 - MLT1E3 LTR MaLR 0 624 25 2309 96 3 0 chr10 2457225 2457527 -137859238 - AluSq SINE Alu -10 303 1 541 177 73 8 chr10 2457666 2457790 -137858975 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2457800 2457854 -137858911 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 290 161 18 0 chr10 2457861 2457917 -137858848 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2458655 2459013 -137857752 + T-rich Low_complexity Low_complexity 1 482 0 2286 67 3 0 chr10 2460877 2461177 -137855588 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2462578 2462634 -137854131 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2463309 2463379 -137853386 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2259 99 0 10 chr10 2463534 2463838 -137852927 - AluSp SINE Alu -12 301 1 346 306 66 53 chr10 2464987 2465307 -137851458 + L1M4 LINE L1 4484 4807 -1339 1137 260 19 0 chr10 2465418 2465733 -137851032 - L1MCb LINE L1 -5078 967 647 307 202 62 70 chr10 2465756 2465885 -137850880 + L1MCb LINE L1 934 1061 -4984 * 1211 153 7 65 chr10 2465877 2466152 -137850613 + L1MC1 LINE L1 5623 5881 -452 31 0 0 0 chr10 2466152 2466183 -137850582 + AT_rich Low_complexity Low_complexity 1 31 0 372 157 47 6 chr10 2466183 2466355 -137850410 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 240 54 0 chr10 2468443 2468572 -137848193 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2470051 2470322 -137846443 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2470381 2470514 -137846251 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2472957 2472979 -137843786 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2474442 2474468 -137842297 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2475146 2475252 -137841513 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2475848 2475908 -137840857 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2476266 2476624 -137840141 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2476715 2476799 -137839966 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2476898 2477244 -137839521 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2477550 2477834 -137838931 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2478499 2478872 -137837893 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2479337 2479362 -137837403 + AT_rich Low_complexity Low_complexity 1 25 0 287 307 162 0 chr10 2479903 2480082 -137836683 - L1ME LINE L1 -300 5864 5657 4953 248 57 57 chr10 2480102 2480482 -137836283 + L1M4 LINE L1 2 380 -6445 2353 129 11 5 chr10 2480482 2480855 -137835910 + THE1C LTR MaLR 1 375 0 4953 248 57 57 chr10 2480855 2481861 -137834904 + L1M4 LINE L1 380 1384 -5441 2299 114 0 0 chr10 2481861 2482167 -137834598 + AluSq SINE Alu 1 306 -7 4953 248 57 57 chr10 2482167 2483270 -137833495 + L1M4 LINE L1 1384 2656 -4169 477 226 57 56 chr10 2483365 2483558 -137833207 - L1ME LINE L1 -685 5479 5288 180 0 0 0 chr10 2483558 2483578 -137833187 + (TA)n Simple_repeat Simple_repeat 2 21 0 2283 80 0 0 chr10 2483578 2483867 -137832898 - AluY SINE Alu -22 289 1 477 226 57 56 chr10 2483867 2483957 -137832808 - L1ME LINE L1 -875 5289 5192 234 0 0 0 chr10 2484006 2484032 -137832733 + (CA)n Simple_repeat Simple_repeat 1 26 0 322 310 133 22 chr10 2484059 2484285 -137832480 + L1ME LINE L1 377 627 -5443 291 313 0 0 chr10 2484458 2484554 -137832211 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2486482 2486544 -137830221 + C-rich Low_complexity Low_complexity 5 67 0 339 354 50 0 chr10 2486639 2486800 -137829965 - MIR SINE MIR -74 188 20 334 171 81 25 chr10 2486828 2486907 -137829858 - FRAM/FAM SINE Alu -90 85 16 2098 131 3 0 chr10 2487832 2488130 -137828635 + AluSx SINE Alu 1 299 -13 272 282 13 0 chr10 2488483 2488561 -137828204 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2488984 2489022 -137827743 + AT_rich Low_complexity Low_complexity 1 38 0 2021 127 3 29 chr10 2489434 2489748 -137827017 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2489787 2489848 -137826917 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 216 381 41 0 chr10 2490733 2490830 -137825935 + L2 LINE L2 3158 3258 -14 2363 86 3 13 chr10 2490917 2491053 -137825712 + AluSx SINE Alu 1 137 -196 2266 85 7 16 chr10 2491053 2491360 -137825405 + AluY SINE Alu 1 304 -7 2363 86 3 13 chr10 2491360 2491559 -137825206 + AluSx SINE Alu 137 333 0 2172 96 7 10 chr10 2492218 2492510 -137824255 + AluSg SINE Alu 1 291 -19 2475 59 7 0 chr10 2493134 2493441 -137823324 - AluY SINE Alu -2 309 1 423 312 76 62 chr10 2494813 2495266 -137821499 - L1MCc LINE L1 -4574 2548 2103 279 93 0 0 chr10 2495266 2495309 -137821456 + (TG)n Simple_repeat Simple_repeat 2 44 0 423 312 76 62 chr10 2495309 2496555 -137820210 - L1MCc LINE L1 -5019 2103 655 768 303 83 5 chr10 2496675 2497098 -137819667 - L1MCc LINE L1 -5949 474 19 1959 143 0 0 chr10 2497315 2497595 -137819170 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2497598 2497651 -137819114 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2498098 2498408 -137818357 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2498545 2498602 -137818163 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2499546 2499862 -137816903 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2500010 2500031 -137816734 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2501628 2501659 -137815106 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2502699 2502940 -137813825 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2503068 2503175 -137813590 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2503268 2503435 -137813330 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2503804 2503991 -137812774 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2505056 2505162 -137811603 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2505173 2505379 -137811386 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2505415 2505540 -137811225 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2507018 2507063 -137809702 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2508355 2508670 -137808095 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2508664 2509300 -137807465 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2510539 2510835 -137805930 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2511646 2511963 -137804802 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2511963 2512039 -137804726 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2512039 2512234 -137804531 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2512331 2512526 -137804239 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2512562 2513017 -137803748 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2513041 2513077 -137803688 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2513250 2513276 -137803489 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2513326 2513519 -137803246 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2514162 2514459 -137802306 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2515847 2515982 -137800783 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2516091 2516168 -137800597 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2516604 2516693 -137800072 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2517785 2517834 -137798931 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2518059 2518331 -137798434 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2521485 2521602 -137795163 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2522002 2522351 -137794414 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2522944 2523072 -137793693 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2523979 2524025 -137792740 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2524028 2524118 -137792647 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2524050 2524140 -137792625 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2524151 2524441 -137792324 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2524833 2524862 -137791903 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2524997 2525026 -137791739 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2525359 2525525 -137791240 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2525760 2525978 -137790787 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2525978 2526624 -137790141 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2527004 2527186 -137789579 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2528639 2528680 -137788085 + (TA)n Simple_repeat Simple_repeat 1 41 0 2292 206 41 4 chr10 2529556 2530022 -137786743 + MER66B LTR ERV1 1 483 -3 233 308 19 19 chr10 2530025 2530129 -137786636 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2530319 2530591 -137786174 + (TA)n Simple_repeat Simple_repeat 1 280 0 337 184 48 0 chr10 2530606 2530774 -137785991 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2530798 2531133 -137785632 + (TA)n Simple_repeat Simple_repeat 1 350 0 1928 190 68 26 chr10 2531133 2531591 -137785174 + L1MC2 LINE L1 5859 6335 -9 225 352 38 48 chr10 2531889 2532099 -137784666 + L3 LINE CR1 816 1023 -554 208 344 0 0 chr10 2532180 2532241 -137784524 - MIR SINE MIR -6 256 196 189 308 68 60 chr10 2532694 2532827 -137783938 + MIR SINE MIR 20 153 -109 272 222 0 48 chr10 2533184 2533247 -137783518 + MER4-int LTR ERV1 1112 1171 -5427 2299 110 7 0 chr10 2533996 2534305 -137782460 - AluSx SINE Alu -1 311 1 2030 115 7 7 chr10 2535101 2535387 -137781378 - AluSx SINE Alu -26 286 1 24 32 0 0 chr10 2536335 2536366 -137780399 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2536390 2536414 -137780351 + AT_rich Low_complexity Low_complexity 1 24 0 203 288 25 94 chr10 2537568 2537728 -137779037 + L2 LINE L2 2906 3054 -218 2629 110 22 0 chr10 2538152 2538508 -137778257 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2540134 2540160 -137776605 + (A)n Simple_repeat Simple_repeat 1 26 0 322 225 0 0 chr10 2540392 2540463 -137776302 - L1ME4a LINE L1 0 6121 6051 2474 48 7 0 chr10 2541024 2541316 -137775449 - AluY SINE Alu -8 303 10 263 338 14 27 chr10 2541798 2541946 -137774819 + L1MCc LINE L1 763 908 -5515 2009 111 18 56 chr10 2542194 2542429 -137774336 + THE1B LTR MaLR 3 223 -141 2170 121 0 3 chr10 2542429 2542727 -137774038 + AluSx SINE Alu 1 297 -15 2009 111 18 56 chr10 2542727 2542832 -137773933 + THE1B LTR MaLR 223 330 -34 722 305 44 29 chr10 2542915 2543327 -137773438 + L1MCc LINE L1 1197 1608 -4887 317 351 15 8 chr10 2543344 2543478 -137773287 + L1M4 LINE L1 4829 4963 -1183 647 283 46 8 chr10 2543484 2543721 -137773044 + L1M4 LINE L1 4004 4249 -1897 823 280 42 21 chr10 2543729 2544111 -137772654 + L1M4 LINE L1 4292 4681 -1465 261 281 66 12 chr10 2546238 2546405 -137770360 + L1MCc LINE L1 523 698 -6243 229 155 21 62 chr10 2546994 2547091 -137769674 + L1MCc LINE L1 1660 1752 -5189 * 815 255 31 80 chr10 2547059 2547605 -137769160 + L1MCc LINE L1 1683 2213 -4728 2171 123 0 7 chr10 2548071 2548402 -137768363 - AluSx SINE Alu 0 330 2 1335 72 0 0 chr10 2548887 2549067 -137767698 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2549067 2549181 -137767584 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2549837 2549872 -137766893 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2551294 2551332 -137765433 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2552011 2552038 -137764727 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2834 118 3 0 chr10 2552214 2552588 -137764177 - THE1C LTR MaLR 0 375 1 2539 136 24 2 chr10 2552950 2553361 -137763404 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2553939 2553988 -137762777 + AT_rich Low_complexity Low_complexity 1 49 0 1636 103 45 5 chr10 2554288 2554512 -137762253 + AluSx SINE Alu 60 292 -20 2529 70 0 3 chr10 2555583 2555895 -137760870 - AluY SINE Alu 0 311 1 245 203 63 101 chr10 2556095 2556253 -137760512 + HAL1b LINE L1 654 805 -543 23 54 0 0 chr10 2556705 2556742 -137760023 + AT_rich Low_complexity Low_complexity 1 37 0 2659 266 126 7 chr10 2558301 2559172 -137757593 + L1M4b LINE L1 1 975 -5884 2529 278 57 45 chr10 2559651 2561054 -137755711 + L1M4b LINE L1 1120 2686 -4452 995 109 0 0 chr10 2561211 2561339 -137755426 - AluSq/x SINE Alu -184 128 1 660 287 0 32 chr10 2561402 2561618 -137755147 - MER3 DNA MER1_type 0 209 1 1921 202 17 6 chr10 2561814 2562175 -137754590 - MLT1A1 LTR MaLR 0 365 1 1467 265 23 25 chr10 2562375 2562846 -137753919 - MER110 LTR ERV1 -5 486 17 225 227 0 0 chr10 2562857 2562901 -137753864 - MER110 LTR ERV1 -446 45 2 207 186 0 0 chr10 2563663 2563706 -137753059 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2563958 2563981 -137752784 + AT_rich Low_complexity Low_complexity 1 23 0 1541 264 57 11 chr10 2564499 2564939 -137751826 - LTR40b LTR ERVL 0 462 3 532 204 168 77 chr10 2565252 2565552 -137751213 + MLT1C LTR MaLR 51 443 -24 367 68 34 0 chr10 2565560 2565619 -137751146 + (TG)n Simple_repeat Simple_repeat 1 61 0 3845 188 33 11 chr10 2566416 2567113 -137749652 - MER44D DNA MER2_type -7 598 15 240 298 26 18 chr10 2567259 2567373 -137749392 + L1MC/D LINE L1 5547 5661 -2147 2112 103 7 33 chr10 2567385 2567687 -137749078 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2567687 2567715 -137749050 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2568384 2568482 -137748283 + (CA)n Simple_repeat Simple_repeat 1 97 0 21 89 0 0 chr10 2568579 2568635 -137748130 + AT_rich Low_complexity Low_complexity 1 56 0 243 286 24 0 chr10 2568636 2568720 -137748045 + L1MC/D LINE L1 5771 5856 -1952 261 0 0 0 chr10 2568950 2568979 -137747786 + (TG)n Simple_repeat Simple_repeat 2 30 0 377 279 68 26 chr10 2569696 2569886 -137746879 - LTR16B LTR ERVL 0 464 267 201 237 13 26 chr10 2623025 2623101 -137693664 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2623789 2623830 -137692935 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2624627 2624656 -137692109 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2624722 2624755 -137692010 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2625113 2625316 -137691449 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2625484 2625998 -137690767 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2626034 2626387 -137690378 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2626405 2626980 -137689785 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2626980 2627284 -137689481 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2627284 2627598 -137689167 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2627598 2627651 -137689114 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2627673 2627697 -137689068 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2627697 2627916 -137688849 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2627955 2628039 -137688726 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2628051 2628223 -137688542 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2628223 2628863 -137687902 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2628863 2629184 -137687581 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2629630 2629937 -137686828 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2632434 2632745 -137684020 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2633266 2636013 -137680752 + L1PB1 LINE L1 3394 6151 0 917 190 0 0 chr10 2636158 2636316 -137680449 - AluSg/x SINE Alu -20 290 133 249 313 133 16 chr10 2636559 2636687 -137680078 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2637741 2637796 -137678969 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2637807 2638322 -137678443 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2638322 2638360 -137678405 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2638360 2638527 -137678238 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2638693 2638901 -137677864 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2640372 2640469 -137676296 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2641223 2641515 -137675250 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2641564 2641968 -137674797 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2642658 2642830 -137673935 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2645979 2646044 -137670721 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2646611 2646726 -137670039 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2646741 2646822 -137669943 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2647076 2647379 -137669386 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2647531 2647674 -137669091 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2647887 2647925 -137668840 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2648185 2648729 -137668036 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2648729 2648781 -137667984 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2650115 2650149 -137666616 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2650225 2650258 -137666507 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2650261 2650501 -137666264 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2650551 2650593 -137666172 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2651067 2651098 -137665667 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2652189 2652416 -137664349 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2652416 2652777 -137663988 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2652777 2653190 -137663575 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2653190 2653386 -137663379 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2654335 2654396 -137662369 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2654562 2654735 -137662030 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2654741 2655057 -137661708 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2655807 2655843 -137660922 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2655980 2656056 -137660709 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2656217 2656524 -137660241 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2657282 2657427 -137659338 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2659054 2659345 -137657420 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2660272 2660397 -137656368 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2660463 2660758 -137656007 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2660793 2661090 -137655675 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2661704 2661728 -137655037 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 733 132 19 0 chr10 2662382 2662488 -137654277 - AluSq/x SINE Alu -204 109 2 223 284 43 43 chr10 2662952 2663068 -137653697 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2663484 2663549 -137653216 - MER41A LTR ERV1 -86 468 403 342 217 36 0 chr10 2663763 2663929 -137652836 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2663993 2664404 -137652361 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2666183 2666238 -137650527 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2666281 2666377 -137650388 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2667192 2667283 -137649482 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2667940 2668250 -137648515 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2668686 2669010 -137647755 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2669171 2669674 -137647091 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2670258 2670745 -137646020 - HAL1 LINE L1 -115 2392 1877 1282 294 121 51 chr10 2670842 2670901 -137645864 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2670901 2671197 -137645568 + AluY SINE Alu 1 296 -15 1282 294 121 51 chr10 2671197 2671916 -137644849 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2671916 2671953 -137644812 + (TG)n Simple_repeat Simple_repeat 2 38 0 1282 294 121 51 chr10 2671953 2672246 -137644519 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2672461 2672671 -137644094 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2672859 2672981 -137643784 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2673909 2674068 -137642697 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2674087 2674292 -137642473 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2674452 2674920 -137641845 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2675235 2675641 -137641124 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2676002 2676069 -137640696 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2676481 2676538 -137640227 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2677479 2677716 -137639049 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2677716 2678020 -137638745 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2678020 2678350 -137638415 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2679360 2679389 -137637376 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2679433 2679638 -137637127 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2679653 2680009 -137636756 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2680796 2680874 -137635891 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2683760 2683807 -137632958 + T-rich Low_complexity Low_complexity 2 49 0 2085 182 57 25 chr10 2685103 2686221 -137630544 + L1MB2 LINE L1 30 1381 -5003 1962 241 66 9 chr10 2686214 2687257 -137629508 + L1MB2 LINE L1 2239 3345 -3037 * 4180 196 38 50 chr10 2687416 2688645 -137628120 + L1MB2 LINE L1 4266 5479 -903 3033 180 30 9 chr10 2688645 2689274 -137627491 + L1MB2 LINE L1 5756 6397 -10 201 277 106 21 chr10 2689824 2689918 -137626847 - MIR3 SINE MIR -95 113 12 180 222 0 0 chr10 2690674 2690710 -137626055 - L2 LINE L2 -5 3308 3273 222 294 35 35 chr10 2690883 2690968 -137625797 + L2 LINE L2 3179 3263 -9 1722 201 31 3 chr10 2690976 2691330 -137625435 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2691710 2691738 -137625027 + AT_rich Low_complexity Low_complexity 1 28 0 4768 86 5 5 chr10 2691748 2692401 -137624364 + L1PA10 LINE L1 5506 6158 -10 235 260 31 31 chr10 2692498 2692625 -137624140 + L1ME LINE L1 5762 5888 -233 258 231 0 0 chr10 2693202 2693267 -137623498 + (CA)n Simple_repeat Simple_repeat 2 66 0 356 289 46 43 chr10 2693357 2693637 -137623128 + L1ME3A LINE L1 5676 5956 -214 1239 113 5 0 chr10 2693739 2693925 -137622840 + THE1C LTR MaLR 1 187 -188 670 219 114 0 chr10 2693925 2694126 -137622639 + L1M4 LINE L1 2451 2674 -3472 1297 254 81 40 chr10 2694271 2694595 -137622170 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2694595 2694615 -137622150 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1297 254 81 40 chr10 2694615 2695204 -137621561 + L1M4 LINE L1 3206 3847 -2299 505 340 43 24 chr10 2695210 2695631 -137621134 + L1MA9 LINE L1 2 430 -5711 314 384 88 16 chr10 2695803 2696110 -137620655 + L1MA9 LINE L1 428 756 -5455 1818 208 38 25 chr10 2696136 2696725 -137620040 + L1MA9 LINE L1 867 1461 -4680 840 215 20 5 chr10 2696721 2696921 -137619844 + L1MA9 LINE L1 4954 5156 -1054 * 5424 44 5 2 chr10 2696922 2697963 -137618802 - SVA Other Other -954 1384 16 207 0 0 0 chr10 2698063 2698086 -137618679 + (GGGAGA)n Simple_repeat Simple_repeat 4 26 0 2209 190 23 23 chr10 2698097 2698799 -137617966 + L1MA9 LINE L1 5152 5857 -498 226 248 30 20 chr10 2698806 2698907 -137617858 + (TA)n Simple_repeat Simple_repeat 2 103 0 858 185 54 0 chr10 2698921 2699149 -137617616 + L1MA9 LINE L1 5870 6131 -101 2719 216 55 4 chr10 2699149 2699776 -137616989 + L1MB7 LINE L1 5297 5965 -219 1423 114 139 147 chr10 2699776 2699937 -137616828 + MSTA LTR MaLR 1 162 -266 2237 121 0 0 chr10 2699937 2700242 -137616523 + AluSx SINE Alu 1 305 -7 1423 114 139 147 chr10 2700242 2700510 -137616255 + MSTA LTR MaLR 162 427 -1 2719 216 55 4 chr10 2700510 2700589 -137616176 + L1MB7 LINE L1 5965 6039 -145 229 297 0 0 chr10 2700593 2700667 -137616098 + L1MB7 LINE L1 6093 6166 -18 1287 247 34 36 chr10 2701077 2701651 -137615114 + L1ME LINE L1 5163 5739 -425 588 296 100 17 chr10 2703074 2703304 -137613461 + MIR SINE MIR 3 251 -11 297 0 0 0 chr10 2704677 2704710 -137612055 + (TA)n Simple_repeat Simple_repeat 2 34 0 1181 74 4 8 chr10 2704929 2705191 -137611574 + (TTTC)n Simple_repeat Simple_repeat 1 261 0 1831 122 0 0 chr10 2705194 2705441 -137611324 - AluSx SINE Alu -24 288 42 22 70 0 0 chr10 2708863 2708906 -137607859 + AT_rich Low_complexity Low_complexity 1 43 0 338 218 0 0 chr10 2709415 2709502 -137607263 + L1MA9 LINE L1 6290 6376 0 227 208 0 19 chr10 2710234 2710287 -137606478 + GA-rich Low_complexity Low_complexity 2 53 0 24 32 0 0 chr10 2711100 2711131 -137605634 + AT_rich Low_complexity Low_complexity 1 31 0 771 213 29 33 chr10 2711140 2711397 -137605368 + MLT1A2 LTR MaLR 179 374 0 2226 275 182 17 chr10 2711432 2712426 -137604339 + L1MDa LINE L1 44 1201 -5339 1439 205 76 12 chr10 2712417 2712827 -137603938 + L1MDa LINE L1 1808 2243 -4297 * 180 0 0 0 chr10 2712931 2712951 -137603814 + (GA)n Simple_repeat Simple_repeat 2 21 0 2128 122 0 0 chr10 2712958 2713254 -137603511 - AluSx SINE Alu -14 298 3 1835 158 27 27 chr10 2713256 2713624 -137603141 - Tigger2a DNA MER2_type -66 368 1 457 234 102 15 chr10 2713699 2713964 -137602801 + L1MDa LINE L1 3288 3575 -2965 28 29 0 0 chr10 2714149 2714184 -137602581 + AT_rich Low_complexity Low_complexity 1 35 0 415 326 43 66 chr10 2714630 2715192 -137601573 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2715348 2715369 -137601396 + AT_rich Low_complexity Low_complexity 1 21 0 2007 149 0 13 chr10 2715369 2715670 -137601095 - AluSx SINE Alu -15 297 1 2584 62 0 0 chr10 2717493 2717798 -137598967 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2718610 2718632 -137598133 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2718634 2718915 -137597850 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2719125 2719139 -137597626 + AT_rich Low_complexity Low_complexity 1 14 -29 2114 102 3 3 chr10 2719139 2719423 -137597342 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2719423 2719452 -137597313 + AT_rich Low_complexity Low_complexity 14 43 0 201 302 47 38 chr10 2721470 2721576 -137595189 - L3b LINE CR1 -209 1374 1268 183 293 0 17 chr10 2721696 2721754 -137595011 - L3 LINE CR1 -413 1164 1108 1521 209 42 45 chr10 2721836 2721976 -137594789 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2721976 2722008 -137594757 + (TG)n Simple_repeat Simple_repeat 1 32 0 1521 209 42 45 chr10 2722008 2722292 -137594473 - L1MA7 LINE L1 -140 6151 5867 876 203 38 38 chr10 2722631 2722867 -137593898 + L1MCa LINE L1 21 256 -6170 * 1037 227 82 9 chr10 2722866 2723183 -137593582 + L1MCa LINE L1 787 1126 -5300 1729 153 7 7 chr10 2723412 2723687 -137593078 + AluJo SINE Alu 1 275 -37 329 277 31 15 chr10 2724933 2725063 -137591702 + MLT1H LTR MaLR 392 523 -26 358 165 54 64 chr10 2725172 2725293 -137591472 - MLT1I LTR MaLR 0 595 280 313 302 38 0 chr10 2726833 2726939 -137589826 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2727281 2727324 -137589441 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2727485 2727522 -137589243 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 157 58 25 chr10 2727702 2727888 -137588877 + (TA)n Simple_repeat Simple_repeat 1 192 0 1297 255 42 0 chr10 2728805 2729138 -137587627 + MER7A DNA MER2_type 1 345 -1 2293 219 16 66 chr10 2729223 2729651 -137587114 + MER82 DNA MER2_type 1 384 -269 2135 135 0 0 chr10 2729651 2729980 -137586785 + AluSx SINE Alu 1 312 0 2293 219 16 66 chr10 2729980 2730230 -137586535 + MER82 DNA MER2_type 384 645 -8 236 279 15 0 chr10 2730305 2730373 -137586392 + MER46C DNA MER2_type 261 329 -9 1397 279 143 20 chr10 2730870 2731612 -137585153 + MER97b DNA MER1_type? 4 836 -217 34 72 0 0 chr10 2731816 2731885 -137584880 + AT_rich Low_complexity Low_complexity 1 69 0 * 264 187 77 66 chr10 2731865 2731956 -137584809 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2732949 2733019 -137583746 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2733114 2733504 -137583261 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2733901 2734284 -137582481 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2734284 2734735 -137582030 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2734735 2734765 -137582000 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2734769 2735051 -137581714 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2735051 2735188 -137581577 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2735196 2735376 -137581389 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2735477 2735870 -137580895 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2738807 2739117 -137577648 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2739318 2739342 -137577423 + GC_rich Low_complexity Low_complexity 1 24 0 261 83 0 0 chr10 2739835 2739871 -137576894 + (TG)n Simple_repeat Simple_repeat 2 37 0 1988 239 54 25 chr10 2739934 2740600 -137576165 + L1MC/D LINE L1 3808 4492 -1654 1780 230 91 16 chr10 2740592 2741267 -137575498 + L1MC/D LINE L1 5082 5807 -435 * 212 313 48 36 chr10 2741398 2741481 -137575284 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2741639 2741714 -137575051 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2742391 2742534 -137574231 + GA-rich Low_complexity Low_complexity 4 144 0 630 266 123 64 chr10 2744950 2745447 -137571318 - MLT1H LTR MaLR 0 549 24 22 35 0 0 chr10 2747285 2747314 -137569451 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2748407 2748439 -137568326 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2748444 2748843 -137567922 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2749379 2749409 -137567356 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2749426 2749734 -137567031 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2749975 2750488 -137566277 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2750535 2750830 -137565935 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2750837 2750916 -137565849 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2752176 2752382 -137564383 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2753014 2753106 -137563659 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2754213 2754460 -137562305 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2754999 2755027 -137561738 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2756616 2757414 -137559351 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2758341 2758524 -137558241 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2758524 2758839 -137557926 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2758839 2758968 -137557797 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2759252 2759330 -137557435 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2759559 2759676 -137557089 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2759867 2760041 -137556724 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2760052 2760076 -137556689 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2761559 2761737 -137555028 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2762325 2762568 -137554197 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2762668 2762765 -137554000 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2762906 2762938 -137553827 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2764435 2764495 -137552270 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2765000 2765262 -137551503 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2765287 2765312 -137551453 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2767803 2768168 -137548597 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2768349 2768418 -137548347 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2769303 2769340 -137547425 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2770521 2770604 -137546161 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2771795 2771946 -137544819 + HERV16 LTR ERVL 1412 1574 -3422 1428 343 48 50 chr10 2772092 2773076 -137543689 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2773737 2773787 -137542978 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2775031 2775106 -137541659 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2775235 2775340 -137541425 + Tigger3(Golem) DNA MER2_type 2921 3029 0 225 267 17 0 chr10 2776211 2776271 -137540494 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2776837 2777070 -137539695 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2777429 2777560 -137539205 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2777709 2778302 -137538463 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2778297 2778538 -137538227 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2778561 2778833 -137537932 - L1M3 LINE L1 -624 6519 6236 * 4216 248 92 33 chr10 2778830 2781477 -137535288 - L1M3 LINE L1 -2105 5001 1977 1854 189 0 0 chr10 2781477 2781778 -137534987 - AluSx SINE Alu -6 306 6 4216 248 92 33 chr10 2781778 2782521 -137534244 - L1M3 LINE L1 -5129 1977 1279 273 309 16 16 chr10 2782915 2783038 -137533727 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2783047 2783108 -137533657 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2783398 2783757 -137533008 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2784365 2784689 -137532076 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2786214 2786514 -137530251 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2787811 2787843 -137528922 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2788088 2788213 -137528552 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2788473 2788768 -137527997 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2789249 2789293 -137527472 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2789753 2789789 -137526976 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2789790 2790097 -137526668 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2790208 2790334 -137526431 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2790359 2790425 -137526340 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2791097 2791456 -137525309 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2793322 2793805 -137522960 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2794033 2794169 -137522596 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2794230 2794427 -137522338 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2794457 2794764 -137522001 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2794767 2794874 -137521891 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2795383 2795422 -137521343 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2796225 2796365 -137520400 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2796386 2796666 -137520099 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2797200 2797800 -137518965 - L1PA8 LINE L1 0 6172 5572 273 233 80 20 chr10 2798702 2798817 -137517948 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2799078 2799144 -137517621 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2799144 2799443 -137517322 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2799443 2799637 -137517128 + L1ME3A LINE L1 5742 5951 -219 1568 204 68 19 chr10 2799651 2800018 -137516747 - MLT1B LTR MaLR -2 388 4 900 124 49 27 chr10 2900230 2900455 -137416310 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2900999 2901026 -137415739 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2902469 2902976 -137413789 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2903346 2903662 -137413103 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2904335 2904482 -137412283 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2904482 2904790 -137411975 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2904790 2906566 -137410199 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2906581 2906711 -137410054 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2907719 2908248 -137408517 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2908395 2908425 -137408340 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2908745 2908802 -137407963 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2909300 2909448 -137407317 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2910657 2910832 -137405933 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2910832 2910862 -137405903 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2910862 2910978 -137405787 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2911170 2911470 -137405295 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2912332 2913053 -137403712 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2913073 2913110 -137403655 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2913110 2914082 -137402683 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2914082 2914801 -137401964 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2914802 2915173 -137401592 - L2 LINE L2 -1 3312 2912 207 310 14 0 chr10 2915629 2915700 -137401065 + MIR SINE MIR 158 229 -33 1942 138 50 44 chr10 2916080 2916442 -137400323 + THE1B LTR MaLR 1 364 0 335 215 223 8 chr10 2916629 2916759 -137400006 + MER104 DNA Tc2 18 175 -5 2000 115 3 16 chr10 2916818 2917131 -137399634 + AluSp SINE Alu 1 309 -4 293 246 125 82 chr10 2917397 2917629 -137399136 - L1ME LINE L1 -315 5855 5614 268 278 90 21 chr10 2918192 2918336 -137398429 - L1MEd LINE L1 -5961 158 5 1846 147 0 28 chr10 2918437 2918757 -137398008 + AluSx SINE Alu 1 311 -1 810 184 0 0 chr10 2920092 2920271 -137396494 + GA-rich Low_complexity Low_complexity 1 179 0 662 268 45 15 chr10 2920931 2921129 -137395636 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2921460 2921743 -137395022 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2922478 2922912 -137393853 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2923130 2923190 -137393575 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2923199 2923264 -137393501 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2923298 2923417 -137393348 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2923417 2923714 -137393051 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2923714 2923982 -137392783 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2923981 2924137 -137392628 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2924140 2924235 -137392530 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2924250 2924596 -137392169 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2924596 2924703 -137392062 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2926018 2926287 -137390478 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2927761 2927852 -137388913 + AluSg/x SINE Alu 217 307 -2 1785 175 62 73 chr10 2927879 2928318 -137388447 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2928763 2928790 -137387975 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2928791 2928889 -137387876 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2928908 2929021 -137387744 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2929466 2929598 -137387167 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2929598 2929910 -137386855 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2929910 2930170 -137386595 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2930946 2931438 -137385327 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2931510 2931586 -137385179 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2931606 2931796 -137384969 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2931852 2932026 -137384739 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2932070 2932369 -137384396 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 2933429 2933826 -137382939 + MER51B LTR ERV1 2 377 0 2428 83 3 10 chr10 2933856 2934169 -137382596 - AluY SINE Alu 0 311 1 298 274 53 26 chr10 2935753 2935866 -137380899 - MER112 DNA MER1_type -58 202 87 2211 136 0 0 chr10 2936458 2936759 -137380006 + AluSx SINE Alu 1 304 -8 351 0 0 0 chr10 2936759 2936798 -137379967 + (TA)n Simple_repeat Simple_repeat 2 40 0 2043 140 0 7 chr10 2936821 2937107 -137379658 - AluJo SINE Alu -26 286 3 2079 120 3 0 chr10 2937867 2938150 -137378615 + AluSq SINE Alu 1 284 -29 2084 276 82 47 chr10 2938524 2938947 -137377818 - L1ME1 LINE L1 -5 6161 5754 3804 50 2 4 chr10 2938947 2939443 -137377322 + L1PA3 LINE L1 5660 6154 -1 2084 276 82 47 chr10 2939443 2939485 -137377280 - L1ME1 LINE L1 -412 5754 5715 1751 157 0 83 chr10 2939485 2939823 -137376942 - AluJo SINE Alu 0 312 3 2084 276 82 47 chr10 2939823 2940487 -137376278 - L1ME1 LINE L1 -451 5715 5076 2409 61 6 52 chr10 2940487 2940813 -137375952 - AluY SINE Alu 0 311 1 1187 55 0 22 chr10 2940816 2940997 -137375768 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 2084 276 82 47 chr10 2940997 2941279 -137375486 - L1ME1 LINE L1 -1091 5075 4693 549 170 9 9 chr10 2941374 2941480 -137375285 - AluSp/q SINE Alu 0 313 208 784 159 0 0 chr10 2942297 2942429 -137374336 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 2943218 2943369 -137373396 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 2943455 2943595 -137373170 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 2943595 2943622 -137373143 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 2943622 2943747 -137373018 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 2944066 2944089 -137372676 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 2944124 2944158 -137372607 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 2944582 2944665 -137372100 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 2944698 2944777 -137371988 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 2946526 2946839 -137369926 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 2947087 2947151 -137369614 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 2947180 2947205 -137369560 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 2947517 2948026 -137368739 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 2948246 2948292 -137368473 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 2948319 2948621 -137368144 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 2948624 2948744 -137368021 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 2948769 2948895 -137367870 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 2949092 2949441 -137367324 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 2949947 2950262 -137366503 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 2951319 2951418 -137365347 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 2951666 2951740 -137365025 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 2951938 2952230 -137364535 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 2953476 2954333 -137362432 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 2954590 2954792 -137361973 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 2956192 2956503 -137360262 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 2961836 2961933 -137354832 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 2962830 2963039 -137353726 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 2963525 2963553 -137353212 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 2963564 2963877 -137352888 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 2967178 2967455 -137349310 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 2967964 2968399 -137348366 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 2968571 2968713 -137348052 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 2968731 2968770 -137347995 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 2972138 2972413 -137344352 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 2973519 2973675 -137343090 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 2974329 2974424 -137342341 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 2974666 2974953 -137341812 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 2975322 2975583 -137341182 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 2975580 2975672 -137341093 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 2976035 2976085 -137340680 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 2976638 2976946 -137339819 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 2977022 2977254 -137339511 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 2977271 2977335 -137339430 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 2977351 2977414 -137339351 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 2977541 2977830 -137338935 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 2979557 2979624 -137337141 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 2980096 2980266 -137336499 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 2984142 2984353 -137332412 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 2985417 2985607 -137331158 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 2986280 2986597 -137330168 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 2987578 2987746 -137329019 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 2989006 2989316 -137327449 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 2990343 2990434 -137326331 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 2992765 2992976 -137323789 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 2993464 2993818 -137322947 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 2994077 2994175 -137322590 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 2994175 2994472 -137322293 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 2994472 2994495 -137322270 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 2994580 2994705 -137322060 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 2995763 2995999 -137320766 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 2996953 2997099 -137319666 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 2997266 2997639 -137319126 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 2997657 2997820 -137318945 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 2997910 2997983 -137318782 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 2998138 2998447 -137318318 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3000415 3000533 -137316232 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3001641 3001994 -137314771 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3002006 3002159 -137314606 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3002661 3002739 -137314026 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3005589 3005871 -137310894 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3006539 3006842 -137309923 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3007835 3007855 -137308910 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3008633 3008680 -137308085 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3009748 3010037 -137306728 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3011467 3011495 -137305270 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3011543 3011596 -137305169 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3013527 3013647 -137303118 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3013732 3013865 -137302900 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3014445 3014558 -137302207 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3014681 3014759 -137302006 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3014773 3014954 -137301811 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3016718 3016944 -137299821 - AluSg/x SINE Alu -9 303 73 1956 182 5 16 chr10 3016982 3017351 -137299414 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3017451 3017618 -137299147 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3018140 3018520 -137298245 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3018589 3018715 -137298050 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3018931 3019753 -137297012 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3021727 3021758 -137295007 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3021827 3022041 -137294724 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3022279 3022576 -137294189 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3022965 3023266 -137293499 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3023754 3024055 -137292710 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3024055 3024112 -137292653 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3024114 3024284 -137292481 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3024307 3024460 -137292305 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3024460 3024739 -137292026 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3024739 3025024 -137291741 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3025135 3025487 -137291278 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3025810 3026055 -137290710 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3026551 3026605 -137290160 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3027850 3028118 -137288647 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3028150 3028203 -137288562 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3028224 3028840 -137287925 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3029213 3029588 -137287177 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3029817 3030127 -137286638 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3031351 3031700 -137285065 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3031700 3032008 -137284757 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3032008 3032526 -137284239 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3032566 3032866 -137283899 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3032892 3033316 -137283449 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3033690 3033771 -137282994 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3033865 3034220 -137282545 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3034572 3034789 -137281976 - L2 LINE L2 -5 3308 3094 265 93 481 0 chr10 3034911 3034965 -137281800 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3035768 3035789 -137280976 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3036259 3036290 -137280475 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3036536 3036565 -137280200 + AT_rich Low_complexity Low_complexity 1 29 0 5910 140 32 1 chr10 3036713 3037890 -137278875 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3038084 3038106 -137278659 + AT_rich Low_complexity Low_complexity 1 22 0 249 298 81 32 chr10 3038673 3038797 -137277968 - MIR SINE MIR -113 149 20 2304 105 0 7 chr10 3038849 3039153 -137277612 + AluSx SINE Alu 11 312 0 330 312 16 16 chr10 3039283 3039408 -137277357 + MIR SINE MIR 119 243 -19 23 0 0 0 chr10 3040218 3040241 -137276524 + AT_rich Low_complexity Low_complexity 1 23 0 2422 104 28 8 chr10 3040532 3040889 -137275876 - THE1B LTR MaLR 0 364 1 1498 179 42 28 chr10 3042161 3042518 -137274247 + L1MA4A LINE L1 5941 6302 -1 2583 60 0 0 chr10 3043472 3043773 -137272992 - AluY SINE Alu -7 304 4 563 291 86 42 chr10 3045199 3045608 -137271157 - MARNA DNA Mariner -134 452 26 2531 63 0 0 chr10 3046630 3046933 -137269832 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3097642 3097757 -137219008 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3097681 3097777 -137218988 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3099163 3099393 -137217372 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3100437 3100734 -137216031 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3101434 3101582 -137215183 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3101582 3101817 -137214948 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3101876 3102051 -137214714 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3102017 3102204 -137214561 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3102237 3102406 -137214359 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3103780 3103991 -137212774 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3104317 3104629 -137212136 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3105027 3105065 -137211700 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3105032 3105071 -137211694 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3105263 3105425 -137211340 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3107254 3107286 -137209479 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3107348 3107370 -137209395 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3107370 3107494 -137209271 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3107497 3107674 -137209091 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3108293 3108351 -137208414 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3108517 3108830 -137207935 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3108853 3109165 -137207600 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3109230 3109251 -137207514 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3109259 3109567 -137207198 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3109672 3109856 -137206909 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3110466 3110637 -137206128 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3110637 3110672 -137206093 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3110672 3110780 -137205985 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3111000 3111292 -137205473 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3111305 3111665 -137205100 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3111665 3111699 -137205066 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3111699 3111845 -137204920 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3113738 3113843 -137202922 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3113895 3114013 -137202752 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3114030 3114113 -137202652 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3114113 3114227 -137202538 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3116435 3116590 -137200175 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3116640 3116747 -137200018 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3116747 3117129 -137199636 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3117129 3117212 -137199553 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3117229 3117347 -137199418 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3117399 3117504 -137199261 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3118070 3118134 -137198631 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3118379 3118418 -137198347 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3118643 3118950 -137197815 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3119848 3120006 -137196759 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3120260 3120573 -137196192 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3120730 3120789 -137195976 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3122074 3122199 -137194566 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3122236 3122338 -137194427 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3123097 3123354 -137193411 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3124578 3124681 -137192084 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3126129 3126410 -137190355 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3126617 3126790 -137189975 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3127397 3127689 -137189076 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3127701 3127862 -137188903 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3129944 3129966 -137186799 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3131145 3131266 -137185499 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3131750 3132043 -137184722 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3132772 3132884 -137183881 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3133136 3133309 -137183456 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3133362 3133534 -137183231 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3133606 3133944 -137182821 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3134512 3134675 -137182090 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3136993 3137061 -137179704 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2075 121 0 0 chr10 3137911 3138208 -137178557 + AluSx SINE Alu 1 297 -15 1598 197 0 10 chr10 3138818 3139128 -137177637 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3141473 3141769 -137174996 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3142879 3143122 -137173643 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3144460 3144490 -137172275 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3144663 3144755 -137172010 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3144798 3145169 -137171596 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3145169 3145234 -137171531 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3145377 3145725 -137171040 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3146138 3146310 -137170455 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3146327 3146405 -137170360 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3147645 3147725 -137169040 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3147982 3148412 -137168353 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3148455 3148494 -137168271 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3148497 3148799 -137167966 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3149156 3149264 -137167501 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3149764 3149796 -137166969 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3150162 3150454 -137166311 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3150843 3150910 -137165855 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3151018 3151367 -137165398 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3151441 3151730 -137165035 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3155648 3156248 -137160517 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3156944 3157034 -137159731 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3157073 3157366 -137159399 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3157376 3157536 -137159229 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3157655 3157715 -137159050 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3157735 3158193 -137158572 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3158243 3158354 -137158411 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3158386 3158592 -137158173 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3158837 3158995 -137157770 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3160513 3160597 -137156168 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3160649 3160930 -137155835 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3160959 3161028 -137155737 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3161065 3161123 -137155642 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3161728 3162810 -137153955 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3162817 3163282 -137153483 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3163386 3163539 -137153226 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3165665 3165720 -137151045 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3165884 3166033 -137150732 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3166033 3166343 -137150422 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3166369 3166520 -137150245 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3166997 3167233 -137149532 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3167311 3167420 -137149345 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3167740 3167768 -137148997 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3167769 3168065 -137148700 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3168206 3168422 -137148343 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3170528 3170730 -137146035 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3170829 3171141 -137145624 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3171162 3171207 -137145558 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3171262 3171317 -137145448 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3171322 3171348 -137145417 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3173221 3173302 -137143463 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3173304 3173616 -137143149 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3176448 3176739 -137140026 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3176740 3176965 -137139800 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3177000 3177189 -137139576 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3177802 3177925 -137138840 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3177933 3178007 -137138758 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3178462 3178525 -137138240 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3179679 3179902 -137136863 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3180006 3180101 -137136664 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3180127 3180301 -137136464 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3180311 3180824 -137135941 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3182109 3182139 -137134626 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3182139 3182441 -137134324 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3182441 3182581 -137134184 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3182946 3183053 -137133712 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3183225 3183256 -137133509 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3183667 3183688 -137133077 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3185409 3185718 -137131047 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3186826 3187143 -137129622 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3187378 3187571 -137129194 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3187615 3188030 -137128735 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3188384 3188494 -137128271 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3188494 3188525 -137128240 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3188525 3188706 -137128059 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3189235 3189398 -137127367 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3190049 3190421 -137126344 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3191862 3192160 -137124605 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3192345 3192787 -137123978 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3192894 3193031 -137123734 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3193049 3193151 -137123614 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3193151 3193448 -137123317 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3193448 3193525 -137123240 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3194167 3194552 -137122213 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3194650 3194675 -137122090 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3195263 3195340 -137121425 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3196560 3196584 -137120181 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3197349 3197488 -137119277 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3197607 3197669 -137119096 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3197684 3197949 -137118816 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3198063 3198371 -137118394 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3198587 3199180 -137117585 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3199208 3199296 -137117469 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3199301 3199707 -137117058 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3199945 3200034 -137116731 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3200034 3200340 -137116425 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3200381 3200452 -137116313 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3201841 3202214 -137114551 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3202267 3202394 -137114371 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3203504 3203626 -137113139 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3203717 3203800 -137112965 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3204110 3204392 -137112373 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3204406 3204482 -137112283 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3205863 3206023 -137110742 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3206052 3206220 -137110545 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3206221 3206287 -137110478 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3206452 3206560 -137110205 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3207218 3207280 -137109485 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3207332 3207638 -137109127 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3207949 3208245 -137108520 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3209325 3210925 -137105840 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3212004 3212135 -137104630 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3212139 3212683 -137104082 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3212983 3213399 -137103366 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3213448 3213596 -137103169 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3213745 3214054 -137102711 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3214107 3214255 -137102510 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3215781 3216092 -137100673 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3216303 3216549 -137100216 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3216552 3216773 -137099992 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3216773 3216799 -137099966 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3216799 3217908 -137098857 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3218002 3218410 -137098355 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3218415 3218513 -137098252 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3218527 3218944 -137097821 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3219057 3219169 -137097596 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3219232 3219346 -137097419 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3219466 3219750 -137097015 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3220880 3220999 -137095766 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3221204 3221274 -137095491 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3222830 3223002 -137093763 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3223483 3223619 -137093146 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3223625 3224268 -137092497 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3224591 3224891 -137091874 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3225538 3225598 -137091167 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3226903 3227032 -137089733 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3227238 3227330 -137089435 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3227841 3228063 -137088702 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3228634 3228898 -137087867 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3229361 3229451 -137087314 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3229455 3229700 -137087065 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3229714 3229807 -137086958 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3231843 3232262 -137084503 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3232264 3232472 -137084293 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3232637 3232697 -137084068 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3232972 3233113 -137083652 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3233647 3233681 -137083084 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3233859 3234157 -137082608 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3234182 3234232 -137082533 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3234304 3234606 -137082159 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3235297 3235728 -137081037 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3235865 3236015 -137080750 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3236129 3236601 -137080164 - MER90 LTR ERV1 -68 546 70 2186 115 13 10 chr10 3236768 3237072 -137079693 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3239812 3239833 -137076932 + AT_rich Low_complexity Low_complexity 1 21 0 2042 125 10 7 chr10 3240307 3240602 -137076163 + AluSx SINE Alu 1 296 -16 184 219 0 0 chr10 3240684 3240725 -137076040 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3241946 3241997 -137074768 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3242531 3242644 -137074121 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3242832 3242890 -137073875 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3242890 3243153 -137073612 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3243153 3243321 -137073444 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3243360 3243420 -137073345 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3244096 3244920 -137071845 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3245015 3245388 -137071377 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3245589 3245682 -137071083 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3246881 3246994 -137069771 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3247013 3247043 -137069722 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3247643 3247754 -137069011 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3248341 3248715 -137068050 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3248989 3249345 -137067420 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3249596 3249624 -137067141 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3249820 3250129 -137066636 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3251377 3251744 -137065021 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3251746 3252520 -137064245 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3252520 3252666 -137064099 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3254075 3254504 -137062261 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3254765 3255059 -137061706 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3257645 3257830 -137058935 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3257869 3257891 -137058874 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3257989 3258308 -137058457 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3259186 3259362 -137057403 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3259545 3259724 -137057041 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3260152 3260466 -137056299 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3260797 3260818 -137055947 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3260964 3261301 -137055464 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3261303 3261610 -137055155 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3261622 3261841 -137054924 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3261981 3262319 -137054446 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3262319 3262747 -137054018 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3262747 3263146 -137053619 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3264304 3264439 -137052326 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3266307 3266389 -137050376 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3266831 3266967 -137049798 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3266957 3267111 -137049654 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3267159 3267819 -137048946 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3267802 3268694 -137048071 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3268750 3268805 -137047960 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3268860 3268953 -137047812 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3271048 3271077 -137045688 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3271636 3271942 -137044823 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3272257 3272627 -137044138 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3272673 3272763 -137044002 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3272894 3273076 -137043689 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3273433 3273927 -137042838 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3273936 3274116 -137042649 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3274683 3274752 -137042013 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3274752 3274987 -137041778 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3275423 3275535 -137041230 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3275994 3276119 -137040646 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3276119 3276145 -137040620 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3276145 3276959 -137039806 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3278211 3278526 -137038239 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3278636 3279179 -137037586 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3279280 3279408 -137037357 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3279832 3280185 -137036580 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3280404 3280453 -137036312 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3282073 3282199 -137034566 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3282230 3282313 -137034452 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3282324 3282434 -137034331 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3284235 3284268 -137032497 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3284525 3285024 -137031741 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3285375 3285662 -137031103 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3287029 3287199 -137029566 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3287596 3287747 -137029018 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3287890 3288033 -137028732 + MLT1B LTR MaLR 16 179 -211 500 186 9 0 chr10 3288055 3288168 -137028597 + CT-rich Low_complexity Low_complexity 2 115 0 * 713 245 7 4 chr10 3288152 3288349 -137028416 + MLT1B LTR MaLR 173 383 -7 475 292 15 8 chr10 3288397 3288527 -137028238 + L2 LINE L2 3136 3266 -6 255 319 26 35 chr10 3288585 3288698 -137028067 - MIR SINE MIR -62 146 35 1967 110 37 0 chr10 3289551 3289854 -137026911 - AluSx SINE Alu 0 313 1 305 281 31 0 chr10 3290027 3290123 -137026642 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3290378 3290427 -137026338 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3290438 3290622 -137026143 + (TG)n Simple_repeat Simple_repeat 2 179 0 2177 100 4 0 chr10 3291693 3291974 -137024791 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3291979 3292007 -137024758 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1498 191 32 45 chr10 3292547 3292925 -137023840 - MER93b LTR ERV1 0 373 1 1201 210 34 92 chr10 3294963 3295174 -137021591 - MER57A LTR ERV1 -1 402 225 2280 115 0 0 chr10 3295174 3295478 -137021287 - AluSx SINE Alu -8 304 1 1201 210 34 92 chr10 3295478 3295680 -137021085 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3296089 3296115 -137020650 + AT_rich Low_complexity Low_complexity 1 26 0 300 287 128 14 chr10 3296183 3296370 -137020395 - MIR SINE MIR -46 216 17 241 233 0 58 chr10 3296913 3296999 -137019766 + LTR29 LTR ERV1 1 81 -541 * 1330 222 91 29 chr10 3296990 3297409 -137019356 + MER39 LTR ERV1 260 704 -3 265 339 64 35 chr10 3297428 3297599 -137019166 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3299589 3299619 -137017146 + (GGA)n Simple_repeat Simple_repeat 1 30 0 181 324 70 0 chr10 3300413 3300484 -137016281 + MIR SINE MIR 61 136 -126 266 280 13 0 chr10 3300513 3300588 -137016177 + (CA)n Simple_repeat Simple_repeat 1 76 0 1230 194 36 12 chr10 3301003 3301156 -137015609 + MLT1A1 LTR MaLR 1 165 -200 2346 85 0 0 chr10 3301156 3301457 -137015308 + AluY SINE Alu 1 301 0 1230 194 36 12 chr10 3301457 3301554 -137015211 + MLT1A1 LTR MaLR 165 258 -107 744 134 0 0 chr10 3301689 3301801 -137014964 + MLT1A1 LTR MaLR 254 365 0 275 315 91 17 chr10 3303660 3303901 -137012864 + LTR16B LTR ERVL 194 452 -12 1948 164 0 3 chr10 3303969 3304273 -137012492 + AluJo SINE Alu 1 303 -9 2086 104 11 0 chr10 3304412 3304733 -137012032 + AluSp SINE Alu 1 313 0 1460 233 29 11 chr10 3304891 3305273 -137011492 + MLT1B LTR MaLR 1 389 -1 1091 246 81 0 chr10 3306219 3306552 -137010213 - MLT1B LTR MaLR -24 366 7 306 322 35 53 chr10 3308777 3308948 -137007817 - MIR SINE MIR -70 192 25 264 112 73 47 chr10 3310466 3310702 -137006063 + (TCTA)n Simple_repeat Simple_repeat 1 242 0 207 298 0 0 chr10 3310955 3311012 -137005753 - MIR SINE MIR -186 76 20 317 280 28 9 chr10 3311228 3311335 -137005430 + MER5A DNA MER1_type 1 109 -80 270 81 0 0 chr10 3311474 3311511 -137005254 + (A)n Simple_repeat Simple_repeat 1 37 0 27 73 0 0 chr10 3312405 3312460 -137004305 + AT_rich Low_complexity Low_complexity 1 55 0 2301 94 10 0 chr10 3312969 3313268 -137003497 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3315713 3315734 -137001031 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3315910 3315969 -137000796 - MIR SINE MIR -88 174 117 1793 167 7 66 chr10 3317948 3318356 -136998409 + MLT1B LTR MaLR 1 384 -6 2309 108 7 7 chr10 3318597 3318902 -136997863 - AluSx SINE Alu -7 305 1 280 292 42 0 chr10 3318913 3319009 -136997756 + LTR67 LTR ERVL 458 557 0 2643 147 36 74 chr10 3319155 3319537 -136997228 + LTR26B LTR ERV1 1 359 -172 2027 123 14 0 chr10 3319537 3319840 -136996925 + AluSx SINE Alu 1 307 0 2643 147 36 74 chr10 3319840 3320006 -136996759 + LTR26B LTR ERV1 359 530 -1 332 316 83 26 chr10 3320902 3321095 -136995670 + MIR SINE MIR 24 227 -35 182 306 69 14 chr10 3321757 3321829 -136994936 + L2 LINE L2 3142 3217 -55 270 0 0 0 chr10 3323133 3323163 -136993602 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3323162 3323185 -136993580 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3323223 3323303 -136993462 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3323311 3323350 -136993415 + (TG)n Simple_repeat Simple_repeat 2 40 0 2047 119 20 0 chr10 3323719 3324012 -136992753 - AluSx SINE Alu -13 299 1 1914 94 11 34 chr10 3324705 3324970 -136991795 - AluSg SINE Alu -16 294 36 2803 208 45 46 chr10 3325510 3326355 -136990410 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3327411 3327483 -136989282 + (TC)n Simple_repeat Simple_repeat 1 72 0 1960 179 40 71 chr10 3328224 3328537 -136988228 - MLT1D LTR MaLR -3 502 209 2231 42 4 11 chr10 3328537 3328821 -136987944 - AluY SINE Alu 0 300 19 1960 179 40 71 chr10 3328821 3329024 -136987741 - MLT1D LTR MaLR -296 209 1 237 268 123 58 chr10 3329145 3329303 -136987462 + L1ME LINE L1 5617 5763 -358 1738 240 87 23 chr10 3329303 3329832 -136986933 - MLT1F1 LTR MaLR 0 567 5 237 268 123 58 chr10 3329832 3329949 -136986816 + L1ME LINE L1 5763 5910 -211 729 266 22 3 chr10 3330152 3330338 -136986427 + MIR SINE MIR 1 190 -18 314 352 72 0 chr10 3330312 3330437 -136986328 - MER5B DNA MER1_type -44 134 1 * 2732 36 0 0 chr10 3330688 3330991 -136985774 + AluYa5 SINE Alu 1 303 -8 366 180 0 90 chr10 3331524 3331613 -136985152 - MIR3 SINE MIR -2 206 126 1291 203 34 69 chr10 3331986 3332306 -136984459 - AluSx SINE Alu -3 309 1 4061 192 23 9 chr10 3332314 3333189 -136983576 - L1MC3 LINE L1 -3 7782 5444 4160 107 0 88 chr10 3333758 3334486 -136982279 - MER4A LTR ERV1 0 664 1 249 277 130 48 chr10 3334784 3334986 -136981779 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3334986 3335015 -136981750 + AT_rich Low_complexity Low_complexity 1 29 0 280 247 88 71 chr10 3336466 3336636 -136980129 - MER34 LTR ERV1 -2 540 450 465 207 41 130 chr10 3336757 3337003 -136979762 - MER34C LTR ERV1 -321 264 41 2586 80 0 3 chr10 3337092 3337403 -136979362 + AluSx SINE Alu 3 312 0 298 288 120 33 chr10 3338013 3338197 -136978568 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3338214 3338239 -136978526 + AT_rich Low_complexity Low_complexity 1 25 0 7589 198 15 21 chr10 3338254 3340802 -136975963 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3340870 3340929 -136975836 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3343032 3343070 -136973695 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3343653 3343975 -136972790 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3344217 3344528 -136972237 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3344692 3344989 -136971776 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3345436 3345457 -136971308 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3346280 3346364 -136970401 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3347433 3347613 -136969152 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3347848 3348028 -136968737 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3349454 3349556 -136967209 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3349940 3350242 -136966523 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3350243 3350532 -136966233 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3350683 3350813 -136965952 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3352459 3352947 -136963818 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3353585 3353725 -136963040 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3354182 3354620 -136962145 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3354935 3355074 -136961691 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3355124 3355512 -136961253 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3356958 3357284 -136959481 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3357422 3357545 -136959220 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3359568 3359715 -136957050 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3360588 3360805 -136955960 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3360805 3361103 -136955662 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3361103 3361183 -136955582 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3361498 3361585 -136955180 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3361589 3361694 -136955071 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3361820 3362113 -136954652 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3364506 3364736 -136952029 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3364795 3364917 -136951848 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3364917 3364946 -136951819 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3364946 3365116 -136951649 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3365122 3365145 -136951620 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3366406 3366519 -136950246 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3366739 3366921 -136949844 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3366921 3366963 -136949802 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3367831 3367934 -136948831 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3368645 3368763 -136948002 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3369562 3369757 -136947008 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3369890 3370039 -136946726 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3371119 3371221 -136945544 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3371652 3371839 -136944926 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3372208 3372291 -136944474 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3372302 3372691 -136944074 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3373832 3374133 -136942632 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3374151 3374339 -136942426 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3374367 3374542 -136942223 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3377081 3377120 -136939645 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3377136 3377176 -136939589 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3377843 3378179 -136938586 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3378469 3378593 -136938172 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3379162 3379555 -136937210 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3379555 3379990 -136936775 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3379990 3380352 -136936413 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3380352 3380495 -136936270 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3380521 3380657 -136936108 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3381235 3381644 -136935121 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3381785 3381912 -136934853 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3382360 3382746 -136934019 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3382841 3382887 -136933878 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3382888 3382928 -136933837 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3383148 3383169 -136933596 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3383194 3383395 -136933370 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3385869 3386161 -136930604 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3386711 3386733 -136930032 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3387631 3387714 -136929051 - MLT1D LTR MaLR -389 116 34 2827 274 78 55 chr10 3387714 3390277 -136926488 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3390277 3390602 -136926163 - AluJb SINE Alu 0 313 1 2827 274 78 55 chr10 3390602 3390742 -136926023 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3390871 3390896 -136925869 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3392038 3392340 -136924425 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3393036 3393071 -136923694 + AT_rich Low_complexity Low_complexity 1 35 0 289 310 150 0 chr10 3394737 3394850 -136921915 + MIR SINE MIR 63 192 -70 2317 90 3 26 chr10 3395248 3395560 -136921205 + AluSp SINE Alu 1 305 -8 403 322 99 7 chr10 3395679 3395831 -136920934 + MIR3 SINE MIR 37 202 -6 2127 107 0 0 chr10 3396090 3396393 -136920372 + AluSx SINE Alu 12 314 0 2299 122 0 0 chr10 3396545 3396849 -136919916 + AluSx SINE Alu 1 304 -8 282 262 192 77 chr10 3397627 3397913 -136918852 - MLT1E1 LTR MaLR -23 631 313 4214 76 53 32 chr10 3398352 3398642 -136918123 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3398642 3398683 -136918082 + (CA)n Simple_repeat Simple_repeat 1 41 0 4214 76 53 32 chr10 3398683 3399009 -136917756 + L1PB1 LINE L1 5804 6151 0 1835 237 59 13 chr10 3399043 3399498 -136917267 + MLT1D LTR MaLR 13 488 -17 3462 218 36 139 chr10 3399518 3401044 -136915721 + MLT1D-int LTR MaLR 3 1371 0 1025 228 25 22 chr10 3401044 3401320 -136915445 + MLT1D LTR MaLR 1 277 -228 1394 171 74 119 chr10 3401327 3401954 -136914811 + LTR49 LTR ERV1 5 565 0 1013 228 50 0 chr10 3401954 3402173 -136914592 + MLT1D LTR MaLR 276 505 0 2400 68 0 42 chr10 3403440 3403747 -136913018 - AluY SINE Alu -13 298 5 435 267 0 0 chr10 3404159 3404264 -136912501 + MIR SINE MIR 97 201 -61 2213 117 39 28 chr10 3404433 3404793 -136911972 + THE1B LTR MaLR 1 364 0 2392 59 28 0 chr10 3406354 3406643 -136910122 - AluY SINE Alu -14 297 1 2311 119 14 6 chr10 3408384 3408736 -136908029 + THE1A LTR MaLR 1 355 0 2154 124 10 3 chr10 3410605 3410911 -136905854 - AluSq SINE Alu -5 308 1 621 306 198 14 chr10 3413471 3413975 -136902790 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3414793 3414815 -136901950 + AT_rich Low_complexity Low_complexity 1 22 0 1947 138 0 43 chr10 3414870 3415175 -136901590 + AluSx SINE Alu 1 292 -20 5643 129 19 2 chr10 3415411 3416623 -136900142 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3418363 3418405 -136898360 + AT_rich Low_complexity Low_complexity 1 42 0 2402 82 0 0 chr10 3419395 3419689 -136897076 - AluSg SINE Alu -16 294 1 441 297 30 25 chr10 3421840 3422076 -136894689 - L3 LINE CR1 -190 1387 1151 288 346 26 19 chr10 3422544 3422700 -136894065 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3422637 3422812 -136893953 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3423243 3423354 -136893411 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3424820 3424852 -136891913 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3425799 3425821 -136890944 + AT_rich Low_complexity Low_complexity 1 22 0 419 273 169 7 chr10 3427419 3427573 -136889192 - MIR SINE MIR -45 217 39 331 228 126 36 chr10 3428726 3428893 -136887872 - MIR SINE MIR -17 245 64 213 39 0 0 chr10 3428927 3428953 -136887812 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1030 260 101 9 chr10 3430885 3431231 -136885534 - MLT1B LTR MaLR -12 378 1 399 339 60 50 chr10 3431816 3432167 -136884598 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3432167 3432221 -136884544 + (CA)n Simple_repeat Simple_repeat 2 56 0 399 339 60 50 chr10 3432221 3432353 -136884412 - L1ME4a LINE L1 -628 5493 5364 323 273 53 33 chr10 3432769 3432919 -136883846 - L1ME4a LINE L1 -1111 5035 4883 2066 148 48 31 chr10 3433442 3433800 -136882965 + THE1B LTR MaLR 1 364 0 276 233 17 0 chr10 3434005 3434065 -136882700 + MLT1A1 LTR MaLR 2 62 -366 620 263 80 77 chr10 3434100 3434374 -136882391 + MLT1A1 LTR MaLR 80 354 -11 2257 159 36 31 chr10 3435598 3436146 -136880619 - MLT2A2 LTR ERVL 0 554 1 333 47 0 0 chr10 3436674 3436717 -136880048 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7244 51 1 1 chr10 3436718 3438264 -136878501 - L1PA5 LINE L1 -16 6138 4597 1649 136 19 0 chr10 3440423 3440688 -136876077 - L1MA8 LINE L1 -28 6263 5994 847 99 8 0 chr10 3440938 3441059 -136875706 - AluSg/x SINE Alu -13 297 176 278 237 45 128 chr10 3441082 3441238 -136875527 + MIR SINE MIR 47 189 -73 2059 53 32 0 chr10 3441719 3441966 -136874799 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3442250 3442273 -136874492 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3444197 3444225 -136872540 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3444771 3444808 -136871957 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1608 50 0 0 chr10 3444808 3444989 -136871776 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3445506 3445647 -136871118 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3445749 3445765 -136871000 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3445765 3446048 -136870717 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3446048 3446597 -136870168 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3446601 3446712 -136870053 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3446712 3447088 -136869677 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3447687 3447721 -136869044 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3447739 3448306 -136868459 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3448345 3448388 -136868377 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3448676 3448986 -136867779 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3450813 3450916 -136865849 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3451504 3452028 -136864737 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3452493 3452634 -136864131 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3452660 3452964 -136863801 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3453226 3453353 -136863412 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3453568 3453752 -136863013 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3453801 3454116 -136862649 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3454697 3454896 -136861869 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3455277 3455467 -136861298 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3455620 3455655 -136861110 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3455667 3455811 -136860954 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3455786 3455988 -136860777 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3456051 3456098 -136860667 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3456113 3456622 -136860143 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3456723 3457077 -136859688 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3457290 3457581 -136859184 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3459358 3459508 -136857257 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3460248 3460362 -136856403 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3460528 3460647 -136856118 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3462215 3462393 -136854372 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3464695 3464815 -136851950 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3466492 3466597 -136850168 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3468559 3468861 -136847904 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3469650 3469675 -136847090 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3469677 3469855 -136846910 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3469889 3470234 -136846531 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3470293 3470470 -136846295 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3471599 3471686 -136845079 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3471826 3472021 -136844744 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3473852 3474002 -136842763 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3475467 3475488 -136841277 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3475895 3476067 -136840698 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3476647 3476954 -136839811 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3478363 3478492 -136838273 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3479841 3480034 -136836731 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3480081 3480103 -136836662 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3480885 3481184 -136835581 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3481404 3481492 -136835273 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3481624 3482105 -136834660 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3482327 3482631 -136834134 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3483054 3483075 -136833690 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3483089 3483222 -136833543 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3484566 3484675 -136832090 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3484687 3484865 -136831900 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3486053 3486095 -136830670 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3486241 3486288 -136830477 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3487369 3487561 -136829204 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3487632 3487660 -136829105 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3488033 3488477 -136828288 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3488773 3489239 -136827526 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3490048 3490316 -136826449 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3490918 3490941 -136825824 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 532 148 0 0 chr10 3490943 3491024 -136825741 - AluSp/q SINE Alu -21 292 212 289 311 78 26 chr10 3491843 3492036 -136824729 - Charlie8 DNA MER1_type -2190 227 25 979 207 85 48 chr10 3492114 3492466 -136824299 - MLT1A1 LTR MaLR 0 365 1 353 308 135 39 chr10 3493413 3493672 -136823093 - L2 LINE L2 -1415 1899 1666 3057 75 5 5 chr10 3493672 3494085 -136822680 - L1PA10 LINE L1 0 6168 5756 353 308 135 39 chr10 3494085 3494283 -136822482 - L2 LINE L2 -1648 1666 1398 2354 72 0 3 chr10 3495040 3495332 -136821433 + AluY SINE Alu 21 311 0 227 339 0 0 chr10 3495379 3495441 -136821324 + MIR SINE MIR 58 119 -143 514 222 157 0 chr10 3495890 3496075 -136820690 + L1ME2 LINE L1 4698 4911 -1235 233 330 35 0 chr10 3496146 3496261 -136820504 + L1ME2 LINE L1 5010 5128 -1018 * 1522 252 102 10 chr10 3496231 3496976 -136819789 + L1ME2 LINE L1 5330 6156 -14 1081 197 0 0 chr10 3497760 3497963 -136818802 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3497960 3502056 -136814709 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3502056 3502080 -136814685 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3502080 3503548 -136813217 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3503557 3503604 -136813161 - Alu SINE Alu 0 302 256 1498 164 13 41 chr10 3503604 3503922 -136812843 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3503978 3504015 -136812750 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3504045 3504081 -136812684 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3505104 3505192 -136811573 - AluS SINE Alu -225 88 2 783 157 15 66 chr10 3505460 3505658 -136811107 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3506648 3506689 -136810076 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3507369 3507415 -136809350 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3508558 3508818 -136807947 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3509082 3509182 -136807583 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3509253 3509296 -136807469 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3509310 3509443 -136807322 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3510660 3510696 -136806069 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3510724 3510872 -136805893 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3511801 3512356 -136804409 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3512879 3512973 -136803792 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3512990 3513326 -136803439 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3514429 3514451 -136802314 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3517091 3517239 -136799526 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3517511 3517893 -136798872 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3518161 3518863 -136797902 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3518904 3519092 -136797673 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3519092 3519375 -136797390 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3519375 3519431 -136797334 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3519457 3519560 -136797205 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3519842 3520789 -136795976 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3522144 3522294 -136794471 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3522415 3522449 -136794316 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3523332 3523504 -136793261 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3524149 3524178 -136792587 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3524512 3524614 -136792151 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3524614 3524919 -136791846 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3524936 3525082 -136791683 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3525083 3525183 -136791582 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3525183 3525744 -136791021 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3525744 3525767 -136790998 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3526830 3527136 -136789629 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3527797 3527881 -136788884 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3529858 3529941 -136786824 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3529941 3530049 -136786716 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3530180 3530386 -136786379 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3531173 3531331 -136785434 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3532669 3532965 -136783800 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3533128 3533165 -136783600 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3533490 3533678 -136783087 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3533948 3534023 -136782742 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3534947 3535110 -136781655 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3535121 3535282 -136781483 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3537855 3538042 -136778723 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3538522 3539115 -136777650 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3539322 3539516 -136777249 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3539633 3539718 -136777047 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3539721 3539843 -136776922 - MIR SINE MIR -67 195 81 1236 221 60 62 chr10 3540127 3540543 -136776222 + MLT1C LTR MaLR 9 423 -44 780 184 6 34 chr10 3540689 3540851 -136775914 - L1ME LINE L1 -547 5574 5421 * 3757 201 89 10 chr10 3540849 3542086 -136774679 - L1MB8 LINE L1 -4 6174 4834 2062 143 0 7 chr10 3542302 3542479 -136774286 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3542479 3542506 -136774259 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2062 143 0 7 chr10 3542506 3542636 -136774129 - AluSx SINE Alu -182 130 1 1118 196 86 8 chr10 3543030 3543275 -136773490 + MLT1C LTR MaLR 1 264 -203 296 254 83 55 chr10 3545442 3545623 -136771142 - MIR SINE MIR -6 256 71 237 160 40 20 chr10 3545771 3545821 -136770944 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3545929 3545951 -136770814 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2137 118 3 0 chr10 3546333 3546620 -136770145 + AluSx SINE Alu 6 293 -19 1523 224 80 23 chr10 3546832 3547269 -136769496 - MLT1C LTR MaLR 0 467 6 253 300 50 25 chr10 3547384 3547504 -136769261 - MLT1J2 LTR MaLR -45 405 283 1303 213 66 18 chr10 3547635 3548015 -136768750 + L1M4 LINE L1 4901 5298 -848 464 275 178 51 chr10 3548040 3548652 -136768113 + L2 LINE L2 2625 3311 -2 232 277 213 19 chr10 3548707 3548862 -136767903 - L1ME4a LINE L1 -96 6025 5841 229 253 133 0 chr10 3548914 3548989 -136767776 - L1ME4a LINE L1 -2108 5700 5616 1734 87 101 56 chr10 3549065 3549351 -136767414 - AluSg SINE Alu -9 301 3 2056 144 3 3 chr10 3549883 3550195 -136766570 + AluSx SINE Alu 1 312 0 1265 285 93 24 chr10 3550233 3550784 -136765981 + MLT1E LTR MaLR 5 593 0 338 335 153 0 chr10 3551062 3551232 -136765533 + LTR41 LTR ERVL 342 537 -236 331 153 0 0 chr10 3551336 3551395 -136765370 - AluS SINE Alu -248 60 2 254 358 75 11 chr10 3551674 3551861 -136764904 - MIR SINE MIR -40 222 24 350 299 76 28 chr10 3552120 3552150 -136764615 - MIR3 SINE MIR -33 175 148 2119 115 0 20 chr10 3552150 3552455 -136764310 - AluSx SINE Alu -13 299 1 350 299 76 28 chr10 3552455 3552568 -136764197 - MIR3 SINE MIR -60 148 25 303 253 126 0 chr10 3552860 3552955 -136763810 - L2 LINE L2 -747 2567 2461 1718 161 16 20 chr10 3553829 3554133 -136762632 + AluJo SINE Alu 1 303 -9 474 254 8 8 chr10 3554332 3554450 -136762315 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3605670 3605714 -136711051 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3606388 3606601 -136710164 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3606601 3606732 -136710033 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3607187 3607272 -136709493 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3607756 3607869 -136708896 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3608167 3608190 -136708575 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3608256 3608376 -136708389 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3608878 3608943 -136707822 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3608990 3609093 -136707672 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3609142 3609282 -136707483 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3609441 3609584 -136707181 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3609698 3609748 -136707017 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3611135 3611160 -136705605 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3611355 3611487 -136705278 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3611481 3611664 -136705101 - MIR SINE MIR -18 244 51 1648 123 19 112 chr10 3612588 3612962 -136703803 - MER44D DNA MER2_type 0 609 1 201 39 0 0 chr10 3613007 3613033 -136703732 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 324 264 66 16 chr10 3614397 3614518 -136702247 + MIR SINE MIR 107 233 -29 517 192 24 6 chr10 3614923 3615267 -136701498 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3615726 3615896 -136700869 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3617011 3617183 -136699582 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3619422 3619654 -136697111 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3619689 3620055 -136696710 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3620439 3620549 -136696216 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3620659 3620757 -136696008 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3620787 3620813 -136695952 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3621168 3621448 -136695317 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3621458 3621508 -136695257 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3623660 3623901 -136692864 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3623901 3624046 -136692719 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3624279 3624301 -136692464 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3624847 3624966 -136691799 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3624958 3625052 -136691713 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3625680 3625830 -136690935 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3625837 3625941 -136690824 - MER1B DNA MER1_type 0 329 242 246 149 15 119 chr10 3625993 3626060 -136690705 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3626197 3626420 -136690345 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3626507 3627422 -136689343 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3628056 3628297 -136688468 + LTR33 LTR ERVL 3 288 -233 4670 151 46 15 chr10 3628607 3629748 -136687017 - L1MA5A LINE L1 -195 6102 4939 * 5075 172 22 27 chr10 3629741 3630752 -136686013 + L1MA5A LINE L1 3932 4937 -1209 651 278 116 4 chr10 3630765 3631006 -136685759 + L2 LINE L2 3022 3289 -24 1563 133 8 0 chr10 3633546 3633787 -136682978 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3634640 3635073 -136681692 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3635245 3635376 -136681389 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3635421 3635533 -136681232 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3636235 3636290 -136680475 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3636951 3637016 -136679749 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3637459 3637699 -136679066 - HAL1 LINE L1 -744 1763 1510 850 64 0 0 chr10 3638764 3638873 -136677892 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3638873 3639373 -136677392 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3643403 3643433 -136673332 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1916 114 78 0 chr10 3643474 3643745 -136673020 + AluSg SINE Alu 1 292 -18 407 228 44 0 chr10 3645355 3645469 -136671296 + MIR SINE MIR 26 144 -118 1507 232 16 16 chr10 3645763 3646130 -136670635 + MLT1B LTR MaLR 8 374 -16 338 182 15 0 chr10 3646559 3646625 -136670140 - L1MA7 LINE L1 -428 5863 5797 267 279 46 82 chr10 3647051 3647270 -136669495 - L2 LINE L2 -2 3311 3101 2087 140 3 3 chr10 3647321 3647629 -136669136 - AluSx SINE Alu -4 308 1 337 291 35 70 chr10 3648272 3648359 -136668406 + L3 LINE CR1 1144 1224 -353 2056 140 0 3 chr10 3648359 3648651 -136668114 + AluSc SINE Alu 1 291 -18 337 291 35 70 chr10 3648651 3648735 -136668030 + L3 LINE CR1 1224 1309 -268 185 319 42 0 chr10 3649639 3649711 -136667054 - MIR SINE MIR -117 145 71 1163 225 49 70 chr10 3649877 3650263 -136666502 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3650403 3650535 -136666230 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3652551 3652591 -136664174 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3655153 3655248 -136661517 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3655352 3655400 -136661365 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3655533 3655654 -136661111 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3656439 3656476 -136660289 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3656675 3656764 -136660001 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3657120 3657910 -136658855 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3657973 3658134 -136658631 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3658244 3658402 -136658363 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3658464 3658673 -136658092 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3659771 3659810 -136656955 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3660085 3660132 -136656633 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3660132 3660255 -136656510 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3660277 3660305 -136656460 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3660305 3660326 -136656439 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3660774 3661003 -136655762 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3662386 3662407 -136654358 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3662422 3662712 -136654053 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3663023 3663048 -136653717 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3664671 3664755 -136652010 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3664863 3665279 -136651486 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3665282 3665308 -136651457 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3665323 3665397 -136651368 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3666791 3667092 -136649673 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3668160 3668199 -136648566 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3668846 3668867 -136647898 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3668867 3669010 -136647755 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3669091 3669132 -136647633 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3669314 3669344 -136647421 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3669848 3670395 -136646370 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3670773 3671067 -136645698 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3671794 3672084 -136644681 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3672824 3672873 -136643892 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3672873 3672992 -136643773 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3672992 3673297 -136643468 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3673297 3673814 -136642951 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3673814 3673854 -136642911 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3673932 3674468 -136642297 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3674469 3674584 -136642181 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3674740 3675091 -136641674 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3675183 3675694 -136641071 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3676920 3677071 -136639694 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3679101 3679169 -136637596 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3679495 3680121 -136636644 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3680162 3680598 -136636167 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3680614 3680915 -136635850 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3682483 3683113 -136633652 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3685528 3685558 -136631207 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3685634 3685945 -136630820 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3687287 3687365 -136629400 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3687465 3687749 -136629016 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3687749 3687773 -136628992 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3689440 3689503 -136627262 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3689921 3690236 -136626529 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3691360 3691635 -136625130 - AluY SINE Alu 0 311 39 719 317 80 47 chr10 3692232 3692476 -136624289 - L1ME LINE L1 -4993 1090 856 2254 115 0 0 chr10 3692476 3692772 -136623993 - AluSx SINE Alu -16 296 1 719 317 80 47 chr10 3692772 3693564 -136623201 - L1ME LINE L1 -5227 856 22 235 236 67 118 chr10 3693756 3694053 -136622712 - L1M4 LINE L1 -907 5239 4958 455 304 35 47 chr10 3694440 3694611 -136622154 + MIR SINE MIR 24 192 -70 2127 110 3 3 chr10 3694615 3694925 -136621840 + AluSx SINE Alu 3 312 0 609 276 7 73 chr10 3695433 3695708 -136621057 - L2 LINE L2 0 3313 3057 1802 142 48 0 chr10 3697084 3697379 -136619386 + AluSx SINE Alu 1 309 -3 343 296 91 59 chr10 3697520 3697702 -136619063 - L1M4 LINE L1 -1419 4727 4533 2338 106 48 31 chr10 3697702 3698060 -136618705 + THE1B LTR MaLR 1 364 0 343 296 91 59 chr10 3698060 3698130 -136618635 - L1M4 LINE L1 -1613 4533 4467 26 0 0 0 chr10 3698764 3698790 -136617975 + AT_rich Low_complexity Low_complexity 1 26 0 2079 117 0 0 chr10 3699059 3699349 -136617416 - AluSx SINE Alu -1 311 22 600 133 0 0 chr10 3699349 3699432 -136617333 - AluS SINE Alu -228 84 2 360 320 58 29 chr10 3699798 3700004 -136616761 - MIR SINE MIR -3 259 48 225 222 28 14 chr10 3700041 3700113 -136616652 + MLT1F1 LTR MaLR 8 80 -487 272 296 178 0 chr10 3700230 3700399 -136616366 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3701780 3701825 -136614940 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3702039 3702348 -136614417 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3702685 3702758 -136614007 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3702758 3702788 -136613977 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3702788 3703092 -136613673 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3703181 3703387 -136613378 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3703384 3703482 -136613283 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3703482 3703802 -136612963 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3703802 3703866 -136612899 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3703933 3703957 -136612808 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3704314 3704470 -136612295 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3704748 3704919 -136611846 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3705546 3705630 -136611135 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3707118 3707167 -136609598 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3707335 3707368 -136609397 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3708150 3708224 -136608541 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3709427 3709482 -136607283 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3711279 3711431 -136605334 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3714962 3715031 -136601734 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3715280 3715304 -136601461 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3716216 3716291 -136600474 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3718029 3718147 -136598618 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3718542 3718563 -136598202 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3718901 3719190 -136597575 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3719588 3719849 -136596916 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3719904 3720575 -136596190 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3720575 3720800 -136595965 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3720800 3721009 -136595756 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3721075 3721301 -136595464 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3721329 3721542 -136595223 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3721554 3721696 -136595069 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3721696 3721756 -136595009 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3721790 3721865 -136594900 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3721865 3721934 -136594831 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3721941 3723057 -136593708 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3723220 3723279 -136593486 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3723416 3723574 -136593191 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3723590 3723711 -136593054 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3724479 3724794 -136591971 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3726155 3726187 -136590578 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3726675 3726705 -136590060 + (TA)n Simple_repeat Simple_repeat 1 31 0 1730 130 72 4 chr10 3727663 3727939 -136588826 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3728426 3728647 -136588118 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3728671 3729013 -136587752 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3729093 3729352 -136587413 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3729358 3729389 -136587376 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3729598 3729757 -136587008 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3730284 3730336 -136586429 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3731645 3731772 -136584993 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3734025 3734328 -136582437 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3734403 3734594 -136582171 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3734614 3734898 -136581867 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3735997 3736091 -136580674 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3737003 3737023 -136579742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3739284 3739364 -136577401 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3740766 3740850 -136575915 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3741366 3741394 -136575371 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3741564 3741589 -136575176 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3741626 3741649 -136575116 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3742954 3743002 -136573763 + (GA)n Simple_repeat Simple_repeat 2 50 0 263 191 0 0 chr10 3743623 3743670 -136573095 - MER39 LTR ERV1 -268 439 393 228 143 29 100 chr10 3743718 3743788 -136572977 - MER34 LTR ERV1 -411 131 67 244 214 205 9 chr10 3744398 3744510 -136572255 - MER101 LTR ERV1 -223 251 118 241 121 121 0 chr10 3744720 3744786 -136571979 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3745358 3745441 -136571324 + T-rich Low_complexity Low_complexity 3 89 0 2124 137 16 0 chr10 3745446 3745752 -136571013 - AluSq SINE Alu 0 313 3 2182 113 3 0 chr10 3745754 3746046 -136570719 - AluSx SINE Alu -13 299 7 2068 126 0 19 chr10 3746079 3746397 -136570368 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3747085 3747129 -136569636 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3747129 3747168 -136569597 + (TG)n Simple_repeat Simple_repeat 2 40 0 482 374 62 10 chr10 3747347 3747748 -136569017 - L2 LINE L2 -27 3286 2865 450 293 120 4 chr10 3748054 3748313 -136568452 - L2 LINE L2 -923 2391 2103 343 329 6 32 chr10 3749659 3749817 -136566948 + MER63A DNA MER1_type 36 189 -21 24 53 0 0 chr10 3751201 3751239 -136565526 + AT_rich Low_complexity Low_complexity 1 38 0 473 135 73 21 chr10 3751513 3751609 -136565156 + MER4A LTR ERV1 1 101 -563 * 1878 123 6 25 chr10 3751608 3751958 -136564807 + MER4A LTR ERV1 263 664 0 2116 108 22 0 chr10 3752149 3752450 -136564315 + AluSq SINE Alu 1 307 0 340 316 84 33 chr10 3752462 3752854 -136563911 - L2 LINE L2 -422 2892 2481 538 263 45 58 chr10 3752942 3753166 -136563599 + MLT1E LTR MaLR 27 247 -346 3609 148 45 54 chr10 3753166 3753743 -136563022 + L1MA8 LINE L1 5560 6130 -161 2340 139 55 0 chr10 3753743 3754125 -136562640 - MER57A LTR ERV1 0 403 1 3609 148 45 54 chr10 3754125 3754285 -136562480 + L1MA8 LINE L1 6130 6290 -1 251 244 0 39 chr10 3754285 3754355 -136562410 + MLT1E LTR MaLR 521 589 -4 666 290 128 5 chr10 3754361 3754744 -136562021 - L2 LINE L2 -940 2374 1945 345 123 12 37 chr10 3754861 3754942 -136561823 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3754928 3755024 -136561741 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1592 193 43 3 chr10 3755037 3755337 -136561428 - AluJb SINE Alu 0 312 1 2121 114 0 35 chr10 3755698 3756015 -136560750 - AluY SINE Alu -5 306 1 1543 206 96 54 chr10 3756040 3756226 -136560539 + MLT2B2 LTR ERVL 3 180 -335 4564 125 25 10 chr10 3756226 3756907 -136559858 - LTR8 LTR ERV1 0 691 1 1543 206 96 54 chr10 3756907 3757147 -136559618 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3757150 3757173 -136559592 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3757173 3757226 -136559539 + (TG)n Simple_repeat Simple_repeat 2 53 0 306 329 79 14 chr10 3757298 3757438 -136559327 - HAL1 LINE L1 -1131 1376 1228 291 157 0 0 chr10 3757547 3757598 -136559167 + (CA)n Simple_repeat Simple_repeat 2 52 0 249 211 0 0 chr10 3757633 3757690 -136559075 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 249 308 93 0 chr10 3757694 3757801 -136558964 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3757847 3757869 -136558896 + AT_rich Low_complexity Low_complexity 1 22 0 2061 80 30 36 chr10 3758347 3758519 -136558246 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3758519 3758549 -136558216 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2061 80 30 36 chr10 3758549 3758678 -136558087 - AluY SINE Alu -180 131 3 448 294 47 56 chr10 3758711 3758925 -136557840 - HAL1 LINE L1 -1144 1363 1152 728 228 7 0 chr10 3759302 3759451 -136557314 + FRAM SINE Alu 9 158 -18 2073 112 0 4 chr10 3759459 3759773 -136556992 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3759816 3759848 -136556917 + AT_rich Low_complexity Low_complexity 1 32 0 1278 99 0 6 chr10 3760917 3761088 -136555677 - AluSg/x SINE Alu -18 294 125 216 0 0 0 chr10 3763040 3763064 -136553701 + (A)n Simple_repeat Simple_repeat 1 24 0 425 328 52 35 chr10 3813277 3813317 -136503448 - MLT1K LTR MaLR -5 583 545 1815 129 23 42 chr10 3813317 3813626 -136503139 - AluSq SINE Alu -10 303 1 425 328 52 35 chr10 3813626 3813814 -136502951 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3814380 3814404 -136502361 + AT_rich Low_complexity Low_complexity 1 24 0 1384 164 4 9 chr10 3814404 3814630 -136502135 - AluSx SINE Alu -87 225 1 1365 134 5 0 chr10 3814632 3814848 -136501917 - AluSq SINE Alu -2 311 95 1983 149 3 0 chr10 3815585 3815893 -136500872 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3816511 3816533 -136500232 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 3816572 3816604 -136500161 + AT_rich Low_complexity Low_complexity 1 32 0 1619 114 0 48 chr10 3816606 3816877 -136499888 - AluSc SINE Alu -7 302 45 1831 158 0 0 chr10 3818329 3818620 -136498145 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3818875 3818914 -136497851 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3819143 3819172 -136497593 + AT_rich Low_complexity Low_complexity 1 29 0 2300 64 0 10 chr10 3819750 3820045 -136496720 + AluY SINE Alu 1 292 -19 2303 169 14 43 chr10 3820886 3821019 -136495746 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3821019 3821187 -136495578 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1880 139 0 0 chr10 3821187 3821467 -136495298 - AluSx SINE Alu -32 280 1 2303 169 14 43 chr10 3821467 3821770 -136494995 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3823182 3823245 -136493520 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 279 273 45 50 chr10 3823813 3823970 -136492795 - MIR3 SINE MIR -62 146 8 806 189 0 0 chr10 3824552 3824684 -136492081 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3824849 3824871 -136491894 + (TC)n Simple_repeat Simple_repeat 2 23 0 214 236 125 28 chr10 3824913 3824985 -136491780 - L2 LINE L2 -20 3252 3174 1893 130 34 0 chr10 3825335 3825628 -136491137 - AluSx SINE Alu -9 303 1 814 185 72 5 chr10 3827465 3827660 -136489105 + MSTA LTR MaLR 1 208 -220 1975 107 66 19 chr10 3827689 3828008 -136488757 + MSTA LTR MaLR 95 428 0 522 278 99 61 chr10 3828085 3828719 -136488046 + L2 LINE L2 2646 3308 -5 960 112 0 0 chr10 3829379 3829513 -136487252 + AluSg SINE Alu 1 134 -176 2422 63 0 0 chr10 3829513 3829812 -136486953 + AluY SINE Alu 1 299 -12 1766 191 16 22 chr10 3829883 3830250 -136486515 + MLT1A1 LTR MaLR 1 365 0 617 165 61 9 chr10 3830608 3830723 -136486042 - AluJo SINE Alu -176 136 16 1941 134 3 0 chr10 3831010 3831293 -136485472 + AluSx SINE Alu 6 289 -23 2675 185 25 10 chr10 3831326 3831845 -136484920 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3831848 3831880 -136484885 + AT_rich Low_complexity Low_complexity 1 32 0 1798 145 3 0 chr10 3832655 3833118 -136483647 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3833122 3833171 -136483594 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 333 338 89 43 chr10 3834034 3834730 -136482035 - L2 LINE L2 -1303 2011 1284 863 98 0 38 chr10 3834842 3835026 -136481739 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 191 143 63 48 chr10 3835045 3835108 -136481657 - L2 LINE L2 -2185 1129 1066 471 241 102 80 chr10 3835116 3835192 -136481573 - MLT1J LTR MaLR -4 507 434 1852 142 0 57 chr10 3835192 3835523 -136481242 - AluSx SINE Alu 0 312 1 471 241 102 80 chr10 3835523 3835720 -136481045 - MLT1J LTR MaLR -77 434 228 2354 77 3 0 chr10 3836236 3836536 -136480229 - AluSp SINE Alu -12 301 1 195 245 0 20 chr10 3836559 3836608 -136480157 - L2 LINE L2 0 3313 3266 247 266 13 0 chr10 3837417 3837496 -136479269 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3837657 3838002 -136478763 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3838258 3838284 -136478481 + AT_rich Low_complexity Low_complexity 1 26 0 240 215 92 15 chr10 3838396 3838461 -136478304 - L2 LINE L2 -62 3251 3182 376 251 20 29 chr10 3838497 3838610 -136478155 + L1MC1 LINE L1 6216 6329 -15 1844 154 3 0 chr10 3838610 3838921 -136477844 + AluJb SINE Alu 1 312 0 376 251 20 29 chr10 3838921 3838936 -136477829 + L1MC1 LINE L1 6329 6343 -1 208 317 54 48 chr10 3839058 3839225 -136477540 - L2 LINE L2 -252 3020 2853 262 211 218 30 chr10 3839339 3839472 -136477293 - L1ME3 LINE L1 -2 6160 6003 462 266 68 34 chr10 3839751 3839928 -136476837 + MIR SINE MIR 33 215 -47 225 0 0 0 chr10 3840309 3840334 -136476431 + (T)n Simple_repeat Simple_repeat 1 25 0 1125 211 4 4 chr10 3841269 3841496 -136475269 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3842062 3842083 -136474682 + AT_rich Low_complexity Low_complexity 1 21 0 744 257 19 10 chr10 3842410 3842616 -136474149 + MIR SINE MIR 41 248 -14 2160 113 3 0 chr10 3842622 3842923 -136473842 - AluSx SINE Alu -10 302 1 341 228 0 38 chr10 3843483 3843562 -136473203 - MLT1G LTR MaLR -474 81 6 6250 166 17 8 chr10 3844052 3845393 -136471372 + L1PA8 LINE L1 4819 6166 -6 207 0 0 0 chr10 3845982 3846005 -136470760 + (T)n Simple_repeat Simple_repeat 1 23 0 1709 119 65 25 chr10 3847361 3847638 -136469127 - AluJo SINE Alu -24 288 1 2059 127 0 0 chr10 3848015 3848335 -136468430 - AluSq SINE Alu 0 320 1 2061 107 37 0 chr10 3849743 3850041 -136466724 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3850103 3850129 -136466636 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 285 319 80 0 chr10 3852521 3852634 -136464131 + MIR SINE MIR 119 240 -22 273 295 137 18 chr10 3852634 3852970 -136463795 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3853617 3853639 -136463126 + AT_rich Low_complexity Low_complexity 1 22 0 1523 203 3 13 chr10 3854407 3854712 -136462053 - AluJo SINE Alu -10 302 1 641 313 127 17 chr10 3855737 3856156 -136460609 + MER69 DNA AcHobo 120 584 -642 * 1280 218 56 28 chr10 3856149 3856311 -136460454 + MER69 DNA AcHobo 2026 2182 -344 1846 167 0 3 chr10 3856311 3856611 -136460154 - AluJo SINE Alu -13 299 1 1280 218 56 28 chr10 3856611 3856874 -136459891 + MER69 DNA AcHobo 2182 2463 -63 372 302 54 0 chr10 3857521 3857650 -136459115 + L2 LINE L2 3173 3308 -5 463 311 178 68 chr10 3857689 3858269 -136458496 - L3 LINE CR1 -47 1530 856 2121 104 10 3 chr10 3858269 3858558 -136458207 - AluSg SINE Alu -19 291 1 463 311 178 68 chr10 3858558 3858692 -136458073 - L3 LINE CR1 -721 856 738 283 214 0 0 chr10 3858836 3858892 -136457873 - L2 LINE L2 -1 3312 3257 183 381 19 9 chr10 3858936 3859041 -136457724 - L3 LINE CR1 -989 588 483 782 267 37 31 chr10 3859069 3859391 -136457374 + MER5C DNA MER1_type 1 324 0 2085 115 44 0 chr10 3859447 3859743 -136457022 - AluSg SINE Alu -1 309 1 249 306 106 0 chr10 3859900 3859985 -136456780 + L2 LINE L2 3220 3313 0 3342 176 18 70 chr10 3861031 3861760 -136455005 + LTR8 LTR ERV1 1 691 0 2137 103 3 3 chr10 3862375 3862665 -136454100 - AluSc SINE Alu -19 290 1 397 35 0 221 chr10 3863445 3863531 -136453234 + MADE1 DNA Mariner 14 80 0 340 340 19 13 chr10 3863944 3864100 -136452665 - L2 LINE L2 -626 2688 2532 264 228 36 0 chr10 3864126 3864327 -136452438 + (TA)n Simple_repeat Simple_repeat 1 208 0 1751 167 37 0 chr10 3864338 3864638 -136452127 - AluSx SINE Alu -1 311 1 384 284 55 40 chr10 3864671 3864872 -136451893 - L2 LINE L2 -829 2485 2282 180 348 132 20 chr10 3865281 3865485 -136451280 - L2 LINE L2 -387 2927 2701 22 0 0 0 chr10 3865949 3865971 -136450794 + AT_rich Low_complexity Low_complexity 1 22 0 2096 115 18 0 chr10 3865978 3866264 -136450501 + AluSc SINE Alu 3 293 -16 229 300 108 33 chr10 3866771 3866891 -136449874 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3867768 3867793 -136448972 + AT_rich Low_complexity Low_complexity 1 25 0 341 210 25 76 chr10 3867928 3868047 -136448718 - Looper DNA T2_type -3 1555 1443 672 270 151 45 chr10 3868092 3868607 -136448158 + MLT1F1 LTR MaLR 1 565 -2 274 316 71 7 chr10 3868614 3868769 -136447996 - L1ME1 LINE L1 -4 6162 5998 1754 266 48 27 chr10 3868778 3869405 -136447360 - Looper DNA T2_type -782 776 137 442 204 79 130 chr10 3869402 3869474 -136447291 - Looper DNA T2_type -1343 215 141 * 1638 198 3 3 chr10 3869474 3869767 -136446998 - AluJb SINE Alu -19 293 1 442 204 79 130 chr10 3869767 3869910 -136446855 - Looper DNA T2_type -1417 141 11 1814 116 31 48 chr10 3870574 3870866 -136445899 + AluSx SINE Alu 8 294 -18 2368 78 7 0 chr10 3870866 3871162 -136445603 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3871638 3871661 -136445104 + AT_rich Low_complexity Low_complexity 1 23 0 2249 90 13 13 chr10 3873105 3873416 -136443349 - AluSx SINE Alu -1 311 1 202 360 23 0 chr10 3874078 3874164 -136442601 + L3 LINE CR1 1073 1160 -417 396 169 0 0 chr10 3874395 3874460 -136442305 - MER46A DNA MER2_type -2 234 170 1135 158 0 6 chr10 3874568 3874745 -136442020 - MER46A DNA MER2_type -60 176 1 501 248 4 88 chr10 3874856 3875082 -136441683 - MIR SINE MIR -11 251 45 671 263 101 59 chr10 3875567 3876065 -136440700 + L2 LINE L2 2790 3305 -8 397 178 14 14 chr10 3876149 3876222 -136440543 + MER63 DNA MER1_type 661 733 -328 1014 160 0 0 chr10 3876383 3876560 -136440205 + AluSg/x SINE Alu 135 311 0 304 349 47 0 chr10 3876620 3876769 -136439996 - MIR SINE MIR -49 213 58 554 329 18 9 chr10 3877003 3877231 -136439534 + MIR SINE MIR 33 262 0 277 258 21 75 chr10 3877627 3877720 -136439045 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 3877935 3877974 -136438791 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2196 112 0 0 chr10 3877980 3878267 -136438498 + AluSq SINE Alu 1 287 -26 4690 204 29 19 chr10 3878275 3879796 -136436969 - L1MA9 LINE L1 -28 6284 4747 1506 166 48 37 chr10 3879796 3880091 -136436674 - AluJb SINE Alu -14 298 1 4690 204 29 19 chr10 3880091 3880142 -136436623 - L1MA9 LINE L1 -1565 4747 4698 2095 130 0 0 chr10 3881853 3882145 -136434620 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 3882149 3882171 -136434594 + AT_rich Low_complexity Low_complexity 1 22 0 1962 146 0 22 chr10 3882428 3882744 -136434021 + AluSp SINE Alu 1 309 -4 228 269 26 39 chr10 3883665 3883743 -136433022 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 3884140 3884318 -136432447 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 3884472 3884973 -136431792 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 3885455 3885520 -136431245 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 3886458 3886725 -136430040 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 3887113 3887412 -136429353 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 3888130 3888254 -136428511 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 3888257 3888288 -136428477 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 3889172 3889288 -136427477 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 3889323 3889623 -136427142 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 3892135 3892170 -136424595 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 3892193 3892439 -136424326 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 3894320 3894341 -136422424 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 3894341 3894455 -136422310 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 3894467 3894822 -136421943 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 3894982 3895015 -136421750 + (TA)n Simple_repeat Simple_repeat 2 34 0 273 333 12 0 chr10 3895172 3895256 -136421509 - MIR SINE MIR -137 125 41 1724 132 81 31 chr10 3895762 3896119 -136420646 - THE1C LTR MaLR 0 375 1 491 298 103 86 chr10 3896572 3897085 -136419680 + L1MEd LINE L1 338 859 -5260 40 37 0 0 chr10 3897106 3897160 -136419605 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 3897162 3897289 -136419476 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2263 112 0 10 chr10 3897434 3897737 -136419028 - AluSc SINE Alu -9 300 1 585 313 160 22 chr10 3897737 3898293 -136418472 + L1MEd LINE L1 933 1565 -4745 265 321 21 7 chr10 3899090 3899230 -136417535 + L1MEd LINE L1 2126 2267 -3862 464 290 81 45 chr10 3899319 3899540 -136417225 + L1MEd LINE L1 2274 2502 -3627 251 349 116 0 chr10 3899586 3899758 -136417007 + MIR SINE MIR 71 262 0 2196 136 0 0 chr10 3901010 3901318 -136415447 + AluSx SINE Alu 1 308 -4 434 187 19 65 chr10 3901504 3901611 -136415154 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 3902597 3902661 -136414104 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 3902717 3902739 -136414026 + AT_rich Low_complexity Low_complexity 1 22 0 332 365 58 58 chr10 3902782 3903177 -136413588 - L2 LINE L2 0 3313 2919 294 320 62 46 chr10 3905860 3906054 -136410711 + L2 LINE L2 3117 3313 0 22 0 0 0 chr10 3906097 3906119 -136410646 + AT_rich Low_complexity Low_complexity 1 22 0 29 78 0 0 chr10 3906175 3906239 -136410526 + AT_rich Low_complexity Low_complexity 1 64 0 306 132 38 0 chr10 3907226 3907279 -136409486 + MER5B DNA MER1_type 3 57 -121 594 251 0 6 chr10 3907703 3907870 -136408895 - MER104 DNA Tc2 -1 179 14 200 371 80 25 chr10 3908265 3908502 -136408263 + L2 LINE L2 1792 2041 -1273 594 179 32 49 chr10 3909897 3910020 -136406745 - FLAM_C SINE Alu -19 124 4 370 265 160 6 chr10 3910858 3911039 -136405726 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 3911177 3911200 -136405565 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 3911690 3913065 -136403700 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 3913068 3913178 -136403587 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 3913645 3913744 -136403021 + L2 LINE L2 3106 3210 -62 805 263 33 37 chr10 3913761 3914085 -136402680 + L1ME LINE L1 4960 5281 -883 1440 201 0 42 chr10 3914085 3914393 -136402372 - AluJo SINE Alu -17 295 1 805 263 33 37 chr10 3914393 3914577 -136402188 + L1ME LINE L1 5281 5464 -700 764 124 0 148 chr10 3915227 3915437 -136401328 - AluSq SINE Alu -134 179 1 447 371 35 22 chr10 3915488 3915717 -136401048 - MIR SINE MIR -12 250 19 988 200 5 19 chr10 3917137 3917347 -136399418 - Tigger5 DNA MER2_type -63 2260 2054 1791 119 10 34 chr10 3917449 3917744 -136399021 - AluSq SINE Alu -3 310 23 1273 178 57 0 chr10 3917746 3917993 -136398772 + Tigger5 DNA MER2_type 2063 2323 0 239 240 13 0 chr10 3918001 3918076 -136398689 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 1640 184 35 6 chr10 3918133 3918476 -136398289 - MSTA LTR MaLR 0 428 76 228 79 26 0 chr10 3918476 3918514 -136398251 - MSTB LTR MaLR -314 114 76 323 88 18 0 chr10 3918624 3918681 -136398084 - MSTB LTR MaLR -310 118 61 * 549 150 20 0 chr10 3918672 3918772 -136397993 - MSTB LTR MaLR -324 102 1 24 53 0 0 chr10 3919524 3919562 -136397203 + AT_rich Low_complexity Low_complexity 1 38 0 2089 88 3 52 chr10 3920590 3920896 -136395869 + AluSp SINE Alu 1 291 -22 1022 163 113 0 chr10 3921454 3921675 -136395090 + L1PA16 LINE L1 5921 6166 0 331 291 10 0 chr10 3922225 3922328 -136394437 + (TA)n Simple_repeat Simple_repeat 1 104 0 206 379 129 9 chr10 3922677 3922793 -136393972 + L2 LINE L2 3142 3271 -1 275 365 139 21 chr10 3922932 3923220 -136393545 + L3 LINE CR1 1160 1481 -96 2207 113 7 0 chr10 3923226 3923518 -136393247 + AluSx SINE Alu 1 294 -18 289 325 60 17 chr10 3924160 3924277 -136392488 - L2 LINE L2 0 3313 3192 1506 201 34 17 chr10 3924281 3924684 -136392081 + L1MB3 LINE L1 5271 5670 -513 743 178 20 7 chr10 3924687 3924833 -136391932 + FRAM SINE Alu 1 145 -31 1831 206 91 2 chr10 3924856 3925328 -136391437 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 3925446 3925568 -136391197 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 3926379 3926583 -136390182 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 3927363 3927422 -136389343 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 3927449 3927461 -136389304 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 3927461 3927484 -136389281 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 3927551 3927586 -136389179 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 3928140 3928389 -136388376 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 3929892 3930202 -136386563 - AluSx SINE Alu 0 312 3 206 118 0 0 chr10 3930336 3930370 -136386395 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 3930393 3930531 -136386234 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 3931184 3931458 -136385307 + HsTC2 DNA Tc2 578 877 -1021 2168 109 0 0 chr10 3931635 3931972 -136384793 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 3934207 3934264 -136382501 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 3934285 3934385 -136382380 + L2 LINE L2 3211 3308 -5 238 337 10 40 chr10 3934819 3934920 -136381845 + L2 LINE L2 3150 3247 -25 2009 128 59 9 chr10 3935584 3935905 -136380860 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 3936945 3937258 -136379507 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 3938734 3938923 -136377842 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 3939223 3939561 -136377204 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 3940311 3940582 -136376183 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 3941355 3941657 -136375108 + AluSx SINE Alu 6 307 -5 221 371 0 53 chr10 3942896 3943028 -136373737 - MIR3 SINE MIR -10 198 74 2117 98 7 30 chr10 3943655 3943960 -136372805 - AluSg SINE Alu -1 309 12 241 231 19 0 chr10 3944593 3944645 -136372120 + CT-rich Low_complexity Low_complexity 1 53 0 240 145 26 26 chr10 3944651 3944727 -136372038 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 2417 65 0 3 chr10 3946609 3946903 -136369862 - AluY SINE Alu -18 293 1 2238 122 0 0 chr10 3947419 3947715 -136369050 + AluSx SINE Alu 1 296 -16 353 320 113 34 chr10 3950223 3950638 -136366127 + L1MEd LINE L1 440 887 -5232 22 0 0 0 chr10 3950960 3950982 -136365783 + AT_rich Low_complexity Low_complexity 1 22 0 205 209 47 35 chr10 3951059 3951139 -136365626 + (TA)n Simple_repeat Simple_repeat 1 82 0 1938 151 176 14 chr10 3951139 3951503 -136365262 + MSTA LTR MaLR 5 427 -1 287 308 92 64 chr10 3951508 3951834 -136364931 + L1MB5 LINE L1 5323 5660 -461 201 263 0 0 chr10 3952203 3952260 -136364505 + A-rich Low_complexity Low_complexity 1 57 0 838 259 39 104 chr10 3952719 3953247 -136363518 + L1ME3A LINE L1 5288 5772 -398 1857 120 8 0 chr10 3953247 3953506 -136363259 - AluSx SINE Alu -51 261 1 838 259 39 104 chr10 3953506 3953591 -136363174 + L1ME3A LINE L1 5772 5861 -309 2180 99 3 3 chr10 3953913 3954229 -136362536 - AluSx SINE Alu 0 316 1 1360 216 17 3 chr10 3954326 3954613 -136362152 + L1MB5 LINE L1 5884 6174 0 357 24 0 0 chr10 3955025 3955067 -136361698 + (CA)n Simple_repeat Simple_repeat 2 43 0 203 235 0 15 chr10 3955098 3955166 -136361599 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 288 274 0 24 chr10 3955167 3955251 -136361514 + L1MC4 LINE L1 6614 6695 -1347 1040 115 7 7 chr10 3955865 3956013 -136360752 + AluSq/x SINE Alu 1 148 -165 294 234 16 0 chr10 3956165 3956229 -136360536 - AluJ/FLAM SINE Alu -237 65 1 21 36 0 0 chr10 3956233 3956261 -136360504 + AT_rich Low_complexity Low_complexity 1 28 0 1186 225 58 36 chr10 3956346 3956675 -136360090 + MLT1A2 LTR MaLR 21 356 -18 344 268 71 9 chr10 3956861 3956973 -136359792 + MER69 DNA AcHobo 240 358 -868 1729 240 63 58 chr10 3957380 3958370 -136358395 + MER69 DNA AcHobo 1451 2448 -78 1945 147 3 3 chr10 3958370 3958663 -136358102 - AluSx SINE Alu -19 293 1 1729 240 63 58 chr10 3958663 3958733 -136358032 + MER69 DNA AcHobo 2448 2516 -10 1511 240 170 23 chr10 3959879 3960707 -136356058 + Charlie2 DNA MER1_type 1870 2819 -43 1984 134 14 0 chr10 3961078 3961399 -136355366 - AluSx SINE Alu 0 325 1 198 71 0 0 chr10 3961442 3961470 -136355295 + (CA)n Simple_repeat Simple_repeat 2 29 0 382 335 29 50 chr10 3964029 3964271 -136352494 + MIR SINE MIR 9 245 -17 1779 132 50 21 chr10 3964693 3964974 -136351791 + AluSx SINE Alu 1 289 -23 255 173 0 0 chr10 3966079 3966131 -136350634 - LTR66 LTR ERVL -155 455 404 453 141 0 0 chr10 3966134 3966207 -136350558 + (TA)n Simple_repeat Simple_repeat 1 74 0 273 57 0 0 chr10 3966207 3966242 -136350523 + (CA)n Simple_repeat Simple_repeat 2 36 0 2057 112 11 0 chr10 3966246 3966532 -136350233 - AluSq SINE Alu -24 289 1 26 50 0 0 chr10 3967122 3967162 -136349603 + AT_rich Low_complexity Low_complexity 1 40 0 2380 56 0 11 chr10 3971258 3971602 -136345163 - AluY SINE Alu 0 341 1 310 255 113 0 chr10 3972910 3973016 -136343749 + MIR3 SINE MIR 91 208 0 25 51 0 0 chr10 3973605 3973644 -136343121 + AT_rich Low_complexity Low_complexity 1 39 0 1934 152 40 0 chr10 3974352 3974648 -136342117 - AluSx SINE Alu -4 308 1 1983 174 33 12 chr10 3975997 3976558 -136340207 + L1P5 LINE L1 4977 5555 -601 221 0 0 33 chr10 3976870 3976900 -136339865 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2119 92 20 31 chr10 3976903 3977196 -136339569 - AluSq SINE Alu -23 290 1 1213 195 77 49 chr10 3977472 3977759 -136339006 + AluJb SINE Alu 17 311 -1 1042 83 0 0 chr10 3978099 3978231 -136338534 + AluSp/q SINE Alu 162 293 -20 189 217 19 38 chr10 3978382 3978539 -136338226 + (TA)n Simple_repeat Simple_repeat 2 155 0 700 255 45 25 chr10 3978579 3978779 -136337986 - MER20 DNA MER1_type 0 219 16 248 320 13 0 chr10 3980036 3980111 -136336654 - L2 LINE L2 -376 2938 2863 1792 213 11 8 chr10 3980838 3981200 -136335565 - MLT1A1 LTR MaLR -1 364 2 2099 139 7 0 chr10 3981368 3981678 -136335087 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 3981916 3981944 -136334821 + AT_rich Low_complexity Low_complexity 1 28 0 296 127 18 0 chr10 3983934 3983989 -136332776 + GA-rich Low_complexity Low_complexity 4 59 0 248 233 0 42 chr10 3984058 3984178 -136332587 + GA-rich Low_complexity Low_complexity 3 117 0 * 514 206 5 33 chr10 3984151 3984335 -136332430 + G-rich Low_complexity Low_complexity 1 179 0 468 145 15 30 chr10 3984372 3984503 -136332262 + GA-rich Low_complexity Low_complexity 4 132 0 495 279 65 30 chr10 3984973 3985174 -136331591 - MER3 DNA MER1_type 0 209 2 189 0 0 0 chr10 3986546 3986567 -136330198 + (CTA)n Simple_repeat Simple_repeat 1 21 0 2137 122 0 3 chr10 3986579 3986882 -136329883 + AluSx SINE Alu 1 302 -10 783 153 0 0 chr10 3986888 3987006 -136329759 + FLAM_C SINE Alu 1 118 -15 180 158 0 0 chr10 3987615 3987653 -136329112 + (CA)n Simple_repeat Simple_repeat 1 38 0 1967 123 36 10 chr10 3987814 3988115 -136328650 + AluSg SINE Alu 1 309 -1 302 303 48 35 chr10 3988175 3988320 -136328445 + MIR SINE MIR 50 196 -66 750 273 86 51 chr10 3988572 3989000 -136327765 - MLT1J1 LTR MaLR 0 446 4 205 308 110 11 chr10 3989095 3989186 -136327579 + MIR SINE MIR 100 199 -63 214 294 119 40 chr10 3989304 3989430 -136327335 + MIR SINE MIR 8 143 -119 2309 117 0 0 chr10 3990700 3991008 -136325757 + AluSc SINE Alu 1 308 -1 200 282 111 60 chr10 3992104 3992221 -136324544 - MIR SINE MIR -120 142 20 228 285 76 83 chr10 3993309 3993453 -136323312 - MIR SINE MIR -39 223 81 395 220 37 37 chr10 3993984 3994093 -136322672 - Charlie8 DNA MER1_type -2247 170 62 579 211 0 0 chr10 3995199 3995313 -136321452 - L1MA5A LINE L1 -5 6292 6179 912 111 0 15 chr10 3996312 3996447 -136320318 + AluSq/x SINE Alu 1 133 -179 23 0 0 0 chr10 3997389 3997412 -136319353 + AT_rich Low_complexity Low_complexity 1 23 0 860 268 7 48 chr10 3997528 3997819 -136318946 + L1M4 LINE L1 4047 4325 -1821 1182 102 0 0 chr10 3997822 3997969 -136318796 + AluSq/x SINE Alu 6 152 -161 459 0 0 0 chr10 3997971 3998022 -136318743 + (TA)n Simple_repeat Simple_repeat 1 51 0 2575 226 32 26 chr10 3998036 3998677 -136318088 + L1M4 LINE L1 4318 4966 -1180 1605 113 13 17 chr10 3998677 3998784 -136317981 - MER30 DNA MER1_type 0 230 124 2372 87 0 0 chr10 3998784 3999082 -136317683 + AluSg SINE Alu 1 298 -12 1605 113 13 17 chr10 3999082 3999205 -136317560 - MER30 DNA MER1_type -106 124 1 2575 226 32 26 chr10 3999205 3999306 -136317459 + L1M4 LINE L1 4966 5065 -1081 2036 148 0 0 chr10 3999902 4000200 -136316565 + AluSx SINE Alu 1 298 -14 26 30 0 0 chr10 4000833 4000866 -136315899 + AT_rich Low_complexity Low_complexity 1 33 0 2927 63 0 0 chr10 4002066 4002413 -136314352 + L1PA8 LINE L1 5822 6168 -4 1607 154 91 58 chr10 4002779 4003142 -136313623 - THE1C LTR MaLR 0 375 1 349 207 27 0 chr10 4005018 4005129 -136311636 + G-rich Low_complexity Low_complexity 2 115 0 180 298 99 25 chr10 4005637 4005758 -136311007 + L2 LINE L2 2986 3115 -157 1541 205 7 4 chr10 4007987 4008285 -136308480 - AluJb SINE Alu 0 301 3 21 0 0 0 chr10 4008412 4008433 -136308332 + AT_rich Low_complexity Low_complexity 1 21 0 849 147 6 51 chr10 4008622 4008754 -136308011 - L1PA16 LINE L1 0 6166 6040 1546 203 7 3 chr10 4008754 4009055 -136307710 - AluJo SINE Alu -10 302 1 849 147 6 51 chr10 4009055 4009078 -136307687 - L1PA16 LINE L1 -126 6040 6018 217 339 46 39 chr10 4009078 4009208 -136307557 - MIR3 SINE MIR -65 143 13 2103 120 3 0 chr10 4009208 4009500 -136307265 - AluSx SINE Alu -19 293 1 1022 51 17 34 chr10 4009684 4009859 -136306906 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 1717 151 7 11 chr10 4009861 4010140 -136306625 - AluJb SINE Alu -34 278 1 199 227 89 0 chr10 4010240 4010279 -136306486 + MIR SINE MIR 106 115 -93 392 0 21 0 chr10 4010279 4010327 -136306438 + (TAA)n Simple_repeat Simple_repeat 2 50 0 199 227 89 0 chr10 4010327 4010364 -136306401 + MIR SINE MIR 115 147 -61 213 304 163 11 chr10 4010488 4010580 -136306185 - L2 LINE L2 -12 3301 3196 2020 116 3 27 chr10 4010776 4011077 -136305688 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 4011083 4011107 -136305658 + AT_rich Low_complexity Low_complexity 1 24 0 237 218 135 113 chr10 4011107 4011240 -136305525 - L2 LINE L2 -452 2862 2727 2104 121 7 3 chr10 4011747 4012044 -136304721 + AluSg SINE Alu 1 298 -12 1559 251 70 13 chr10 4012075 4012605 -136304160 - MER69 DNA AcHobo -8 2518 1959 950 221 43 59 chr10 4012597 4012791 -136303974 - MER69 DNA AcHobo -753 1773 1584 * 1645 164 27 17 chr10 4012791 4013090 -136303675 - AluJo SINE Alu -10 302 1 950 221 43 59 chr10 4013090 4013217 -136303548 - MER69 DNA AcHobo -942 1584 1457 277 214 101 22 chr10 4013279 4013368 -136303397 - MER69 DNA AcHobo -1032 194 99 2051 134 0 3 chr10 4013578 4013883 -136302882 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 4013886 4013907 -136302858 + AT_rich Low_complexity Low_complexity 1 21 0 2318 105 0 6 chr10 4014667 4014982 -136301783 - AluSq SINE Alu 0 313 1 1820 157 13 13 chr10 4017375 4017681 -136299084 - AluSx SINE Alu -6 306 1 268 316 69 69 chr10 4017816 4017990 -136298775 + MIR SINE MIR 39 212 -50 4311 126 21 11 chr10 4018171 4018800 -136297965 - MER41B LTR ERV1 0 635 1 423 282 8 8 chr10 4019006 4019123 -136297642 - Charlie8 DNA MER1_type -2208 209 93 1699 138 18 90 chr10 4020318 4020470 -136296295 + AluJo SINE Alu 3 120 -192 2176 120 0 7 chr10 4020470 4020778 -136295987 + AluSg SINE Alu 1 306 -4 1699 138 18 90 chr10 4020778 4020959 -136295806 + AluJo SINE Alu 120 312 0 1776 148 24 10 chr10 4021772 4022069 -136294696 - AluSx SINE Alu -11 301 1 504 0 0 0 chr10 4023374 4023430 -136293335 + (TAA)n Simple_repeat Simple_repeat 2 57 0 2070 120 23 3 chr10 4024455 4024754 -136292011 - AluSx SINE Alu -7 305 1 2119 136 7 3 chr10 4025714 4026024 -136290741 + AluSq SINE Alu 1 311 -2 693 241 282 19 chr10 4026244 4026758 -136290007 + LTR50 LTR ERVL 137 785 -10 2712 113 8 3 chr10 4027030 4027392 -136289373 + THE1B LTR MaLR 1 364 0 466 333 34 19 chr10 4027442 4027706 -136289059 + LTR16A LTR ERVL 104 371 -79 2903 169 62 108 chr10 4027911 4028460 -136288305 + LTR8A LTR ERV1 2 508 -219 1988 149 10 3 chr10 4028460 4028768 -136287997 + AluSx SINE Alu 1 310 -2 2903 169 62 108 chr10 4028768 4028979 -136287786 + LTR8A LTR ERV1 508 727 0 1266 256 49 23 chr10 4029361 4029708 -136287057 + MLT1A2 LTR MaLR 1 356 -18 393 301 127 28 chr10 4030035 4030248 -136286517 - MIR SINE MIR 0 262 29 644 254 0 7 chr10 4030799 4030941 -136285824 + MER8 DNA MER2_type 99 239 0 2270 115 0 3 chr10 4031021 4031389 -136285376 - AluSx SINE Alu 0 369 3 329 277 84 34 chr10 4031724 4031843 -136284922 - MIR SINE MIR -1 261 137 2068 135 7 0 chr10 4032802 4033105 -136283660 + AluSx SINE Alu 1 305 -7 238 309 178 13 chr10 4033255 4033407 -136283358 + MER5A DNA MER1_type 13 189 0 439 305 32 13 chr10 4033928 4034082 -136282683 - MIR SINE MIR -85 177 21 2091 143 0 0 chr10 4034638 4034939 -136281826 + AluSp SINE Alu 1 301 -12 1139 132 11 0 chr10 4034939 4035113 -136281652 + AluSq SINE Alu 134 309 -4 608 264 22 0 chr10 4037460 4037638 -136279127 + MER45 DNA AcHobo 3 184 -856 754 202 47 114 chr10 4037792 4038089 -136278676 - MLT1A2 LTR MaLR -74 300 24 398 274 122 16 chr10 4038177 4038498 -136278267 + L1ME4a LINE L1 5764 6118 -3 233 291 254 8 chr10 4038956 4039090 -136277675 + MIR3 SINE MIR 37 203 -5 2154 142 0 0 chr10 4039119 4039422 -136277343 - AluSx SINE Alu -9 303 1 23 0 0 0 chr10 4039594 4039617 -136277148 + AT_rich Low_complexity Low_complexity 1 23 0 1257 176 118 123 chr10 4039654 4040070 -136276695 + MLT2D LTR ERVL 1 414 0 569 184 18 28 chr10 4041072 4041181 -136275584 + AluJo SINE Alu 2 109 -203 990 149 54 0 chr10 4041268 4041436 -136275329 + AluJo SINE Alu 110 286 -26 541 332 25 20 chr10 4041800 4042002 -136274763 + MIR SINE MIR 12 214 -48 243 273 87 40 chr10 4042122 4042272 -136274493 - MIR SINE MIR -4 258 102 340 295 0 27 chr10 4043494 4043606 -136273159 - MIR SINE MIR -2 260 152 2196 109 0 20 chr10 4044588 4044891 -136271874 - AluSg SINE Alu -13 297 1 4113 156 13 15 chr10 4044953 4045639 -136271126 - L1MA6 LINE L1 0 6300 5616 1828 71 8 4 chr10 4045764 4046003 -136270762 - AluY SINE Alu -16 295 56 582 296 90 31 chr10 4046294 4046649 -136270116 - L1ME4a LINE L1 -238 5883 5508 1216 243 114 39 chr10 4046965 4047422 -136269343 + MLT2B1 LTR ERVL 20 510 -10 201 39 0 0 chr10 4047820 4047846 -136268919 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2162 153 23 8 chr10 4050999 4051353 -136265412 - THE1B LTR MaLR -1 363 5 244 295 121 76 chr10 4051906 4052354 -136264411 - L2 LINE L2 0 3313 2846 237 263 152 0 chr10 4052406 4052505 -136264260 + L2 LINE L2 2671 2784 -530 221 306 126 53 chr10 4052541 4052842 -136263923 + L2 LINE L2 2991 3313 0 1227 316 93 51 chr10 4052877 4053626 -136263139 - L2 LINE L2 -683 2631 1851 252 299 95 7 chr10 4054103 4054240 -136262525 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4055129 4055407 -136261358 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4055462 4055547 -136261218 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4055610 4055911 -136260854 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4056017 4056529 -136260236 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4056554 4056611 -136260154 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4056611 4056888 -136259877 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4056888 4058563 -136258202 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4058624 4059138 -136257627 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4059637 4059671 -136257094 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 18 6 chr10 4059684 4059853 -136256912 + GA-rich Low_complexity Low_complexity 1 171 0 661 184 21 16 chr10 4059868 4060300 -136256465 + GA-rich Low_complexity Low_complexity 1 434 0 387 0 0 0 chr10 4061338 4061381 -136255384 + (TA)n Simple_repeat Simple_repeat 2 44 0 183 42 0 0 chr10 4061381 4061405 -136255360 + (TG)n Simple_repeat Simple_repeat 2 25 0 2222 126 0 3 chr10 4062467 4062777 -136253988 + AluSx SINE Alu 1 309 -3 190 273 13 39 chr10 4063081 4063158 -136253607 + MIR SINE MIR 62 136 -126 2012 137 3 0 chr10 4063577 4063862 -136252903 - AluSx SINE Alu -26 286 1 4254 174 24 1 chr10 4064916 4065721 -136251044 + Tigger1 DNA MER2_type 1 823 -1595 3127 135 107 0 chr10 4065724 4066293 -136250472 + Tigger1 DNA MER2_type 1789 2418 0 2491 58 0 13 chr10 4066579 4066887 -136249878 + AluY SINE Alu 1 304 -7 347 272 46 48 chr10 4067187 4067515 -136249250 - MLT1G LTR MaLR -252 343 17 2084 115 0 11 chr10 4067710 4068034 -136248731 + AluSx SINE Alu 1 321 0 2213 185 85 39 chr10 4068284 4068792 -136247973 + LTR26B LTR ERV1 1 531 0 408 169 159 104 chr10 4068872 4069048 -136247717 + MLT1E1 LTR MaLR 1 191 -433 4505 104 1 65 chr10 4069048 4069609 -136247156 - LTR8 LTR ERV1 0 691 187 1976 121 32 4 chr10 4069609 4069889 -136246876 + AluSx SINE Alu 1 288 -24 4505 104 1 65 chr10 4069889 4070065 -136246700 - LTR8 LTR ERV1 -504 187 1 408 169 159 104 chr10 4070065 4070089 -136246676 + MLT1E1 LTR MaLR 191 212 -412 1560 201 64 54 chr10 4070908 4071126 -136245639 - LTR54 LTR ERV1 -3 507 293 3143 128 91 0 chr10 4071126 4071634 -136245131 + MER41C LTR ERV1 1 554 0 1560 201 64 54 chr10 4071634 4071917 -136244848 - LTR54 LTR ERV1 -217 293 1 2576 187 60 11 chr10 4072775 4073341 -136243424 + LTR51 LTR ERV1 1 594 -77 243 0 0 0 chr10 4074226 4074253 -136242512 + (A)n Simple_repeat Simple_repeat 1 27 0 320 226 15 22 chr10 4074454 4074591 -136242174 + (CA)n Simple_repeat Simple_repeat 1 136 0 23 0 0 0 chr10 4076039 4076062 -136240703 + AT_rich Low_complexity Low_complexity 1 23 0 403 274 101 58 chr10 4076200 4076477 -136240288 - L2 LINE L2 -3 3310 3022 526 189 18 0 chr10 4076501 4076612 -136240153 + MSTC LTR MaLR 316 428 0 272 143 0 0 chr10 4076674 4076716 -136240049 - 5S rRNA rRNA -79 42 1 2288 318 88 32 chr10 4076731 4078156 -136238609 - L2 LINE L2 -749 2565 1062 264 257 80 9 chr10 4078158 4078271 -136238494 + HAL1 LINE L1 836 956 -1551 203 374 61 0 chr10 4078738 4078837 -136237928 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4078854 4079178 -136237587 + L1ME3A LINE L1 4960 5278 -884 1475 202 0 39 chr10 4079178 4079485 -136237280 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4079485 4079977 -136236788 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4080010 4080236 -136236529 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4080881 4080908 -136235857 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4081387 4081454 -136235311 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4081999 4082450 -136234315 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4082557 4082975 -136233790 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4082975 4083486 -136233279 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4083486 4083928 -136232837 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4084183 4084553 -136232212 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4084872 4085102 -136231663 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4085243 4085269 -136231496 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4085630 4085660 -136231105 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4085660 4085929 -136230836 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4085929 4086076 -136230689 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4086097 4086958 -136229807 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4087024 4087541 -136229224 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4087541 4087841 -136228924 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4087841 4087906 -136228859 + L2 LINE L2 1495 1886 -1428 1280 261 177 50 chr10 4087920 4088747 -136228018 + L2 LINE L2 2140 3109 -204 2263 102 0 3 chr10 4088747 4089050 -136227715 - AluSx SINE Alu -10 302 1 1280 261 177 50 chr10 4089050 4089261 -136227504 + L2 LINE L2 3109 3292 -21 675 331 38 44 chr10 4089300 4089823 -136226942 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4089905 4090426 -136226339 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4090635 4090789 -136225976 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4090881 4090930 -136225835 - L1MA9 LINE L1 -38 6274 6226 2934 147 67 7 chr10 4091048 4091600 -136225165 - LTR1 LTR ERV1 0 785 201 229 302 0 73 chr10 4091668 4091860 -136224905 + (TCTCTG)n Simple_repeat Simple_repeat 2 179 0 1087 155 57 16 chr10 4091877 4092122 -136224643 - LTR1 LTR ERV1 -530 255 1 294 272 29 10 chr10 4092149 4092252 -136224513 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4092373 4092412 -136224353 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr10 4095137 4095177 -136221588 + AT_rich Low_complexity Low_complexity 1 40 0 2036 139 7 0 chr10 4095177 4095486 -136221279 - AluSx SINE Alu -1 311 1 2186 125 3 0 chr10 4095623 4095928 -136220837 + AluSg SINE Alu 1 306 -4 3492 251 54 4 chr10 4097300 4098300 -136218465 - L1M4 LINE L1 -1306 4840 3791 262 143 13 156 chr10 4098297 4098347 -136218418 + L1MCa LINE L1 1301 1338 -5088 * 1265 222 39 52 chr10 4098347 4098479 -136218286 + AluJo SINE Alu 1 133 -169 2371 89 0 3 chr10 4098479 4098805 -136217960 + AluSc SINE Alu 1 309 0 1265 222 39 52 chr10 4098805 4098978 -136217787 + AluJo SINE Alu 133 302 0 262 143 13 156 chr10 4098978 4099004 -136217761 + L1MCa LINE L1 1338 1366 -5060 828 201 29 29 chr10 4099027 4099231 -136217534 - L1MCa LINE L1 -6189 237 34 2033 125 7 3 chr10 4099270 4099559 -136217206 - AluSx SINE Alu -22 290 1 288 274 0 24 chr10 4100173 4100257 -136216508 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4100258 4100326 -136216439 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4100357 4100399 -136216366 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4100811 4101098 -136215667 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4101195 4101511 -136215254 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4101832 4101917 -136214848 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4101917 4102176 -136214589 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4102176 4102704 -136214061 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4103164 4103221 -136213544 + T-rich Low_complexity Low_complexity 1 57 0 287 322 80 52 chr10 4103590 4103916 -136212849 - L1MB5 LINE L1 -544 5618 5323 1938 151 176 14 chr10 4103921 4104285 -136212480 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4104285 4104365 -136212400 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4104442 4104464 -136212301 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4104786 4105201 -136211564 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4107709 4108005 -136208760 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4108521 4108815 -136207950 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4110697 4110773 -136205992 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4110779 4110831 -136205934 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4110913 4111007 -136205758 + LTR67 LTR ERVL 457 555 -2 2209 81 7 30 chr10 4111464 4111761 -136205004 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4111765 4111848 -136204917 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4111890 4111983 -136204782 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4113771 4113813 -136202952 + AT_rich Low_complexity Low_complexity 1 42 0 605 201 45 124 chr10 4113871 4114274 -136202491 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4114293 4114371 -136202394 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4114379 4114918 -136201847 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4114918 4114954 -136201811 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4114954 4115857 -136200908 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4115856 4116007 -136200758 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4116096 4116134 -136200631 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4116773 4117103 -136199662 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4117903 4117949 -136198816 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4118663 4118958 -136197807 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4119274 4119452 -136197313 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4119477 4119660 -136197105 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4121788 4122050 -136194715 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4122494 4122900 -136193865 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4124876 4125419 -136191346 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4126590 4127081 -136189684 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4127336 4127368 -136189397 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4128108 4128414 -136188351 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4129750 4129854 -136186911 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4129992 4130261 -136186504 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4130424 4130518 -136186247 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4131090 4131117 -136185648 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4132058 4132705 -136184060 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4132855 4132949 -136183816 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4135903 4136131 -136180634 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4136160 4136408 -136180357 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4136408 4136507 -136180258 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4136508 4136579 -136180186 + L2 LINE L2 2776 2847 -467 1052 90 0 0 chr10 4137808 4137941 -136178824 + AluSq/x SINE Alu 1 133 -179 320 129 0 43 chr10 4137941 4137980 -136178785 + (A)n Simple_repeat Simple_repeat 1 37 -30 2035 137 0 9 chr10 4137980 4138295 -136178470 + AluSx SINE Alu 1 312 0 320 129 0 43 chr10 4138295 4138325 -136178440 + (A)n Simple_repeat Simple_repeat 37 67 0 291 317 34 46 chr10 4138868 4139053 -136177712 + MIR3 SINE MIR 17 198 -10 273 329 14 28 chr10 4140517 4140660 -136176105 - L2 LINE L2 -213 3059 2919 516 134 12 0 chr10 4141282 4141387 -136175378 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4142764 4142896 -136173869 + AT_rich Low_complexity Low_complexity 1 132 0 2311 64 3 20 chr10 4143119 4143436 -136173329 + AluY SINE Alu 1 311 0 800 215 19 66 chr10 4144766 4145022 -136171743 - MER31B LTR ERV1 -222 244 1 2141 119 14 0 chr10 4146360 4146655 -136170110 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4148515 4148731 -136168034 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4148783 4149169 -136167596 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4151123 4151152 -136165613 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 622 167 15 0 chr10 4151232 4151364 -136165401 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4153456 4153561 -136163204 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4153729 4154168 -136162597 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4154230 4154285 -136162480 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4155748 4155761 -136161004 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4155761 4156200 -136160565 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4156200 4156341 -136160424 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4156692 4156734 -136160031 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4156899 4156922 -136159843 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4160953 4161235 -136155530 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4161441 4161773 -136154992 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4162181 4162296 -136154469 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4162365 4162646 -136154119 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4162695 4162867 -136153898 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4162880 4162936 -136153829 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4163587 4163945 -136152820 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4164874 4164961 -136151804 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4164962 4164994 -136151771 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4165775 4166033 -136150732 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4166394 4166576 -136150189 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4166635 4166939 -136149826 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4167311 4167483 -136149282 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4167483 4167783 -136148982 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4167783 4167821 -136148944 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4167821 4168193 -136148572 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4168193 4168562 -136148203 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4169301 4169529 -136147236 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4169567 4169718 -136147047 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4170897 4171203 -136145562 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4171285 4171318 -136145447 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4172155 4172213 -136144552 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4173763 4173784 -136142981 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4174122 4175669 -136141096 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4175670 4175887 -136140878 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4176243 4176549 -136140216 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4176767 4176861 -136139904 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4176866 4177673 -136139092 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4179065 4179589 -136137176 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4179591 4180128 -136136637 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4183665 4183703 -136133062 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4186817 4187682 -136129083 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4187809 4187940 -136128825 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4187978 4188046 -136128719 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4188046 4188085 -136128680 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4188085 4188147 -136128618 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4188191 4188540 -136128225 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4188587 4188785 -136127980 + AluJb SINE Alu 86 284 -28 21 36 0 0 chr10 4191166 4191194 -136125571 + AT_rich Low_complexity Low_complexity 1 28 0 491 327 97 27 chr10 4191238 4191608 -136125157 + L2 LINE L2 1728 2123 -1191 286 297 94 92 chr10 4191809 4192014 -136124751 + L2 LINE L2 2560 2763 -509 1856 147 63 0 chr10 4192014 4192299 -136124466 - AluSx SINE Alu -9 303 1 286 297 94 92 chr10 4192299 4192571 -136124194 + L2 LINE L2 2763 3043 -229 2303 194 19 41 chr10 4192669 4193236 -136123529 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4193262 4193284 -136123481 + AT_rich Low_complexity Low_complexity 1 22 0 707 195 24 76 chr10 4195676 4195886 -136120879 + MER20 DNA MER1_type 1 199 -20 1989 101 0 31 chr10 4195894 4196182 -136120583 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4196184 4196234 -136120531 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1225 233 64 16 chr10 4197301 4197678 -136119087 - L1MC2 LINE L1 -11 6333 5939 284 288 74 25 chr10 4198171 4198334 -136118431 - MLT1J2 LTR MaLR -11 439 269 333 342 0 0 chr10 4198405 4198522 -136118243 - MLT1J1 LTR MaLR -291 155 39 361 216 43 9 chr10 4198954 4199070 -136117695 + L1ME3A LINE L1 6046 6165 -5 204 310 155 17 chr10 4199487 4199603 -136117162 + L2 LINE L2 3179 3310 -3 298 226 47 75 chr10 4200628 4200734 -136116031 + LTR16C LTR ERVL 387 489 -2 1415 173 46 87 chr10 4201397 4201720 -136115045 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4204112 4204290 -136112475 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2191 134 0 3 chr10 4204299 4204612 -136112153 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4205141 4205172 -136111593 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4205589 4205655 -136111110 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 218 277 99 78 chr10 4205767 4206099 -136110666 + L2 LINE L2 2636 2974 -340 225 263 94 88 chr10 4206297 4206468 -136110297 + LTR16A1 LTR ERVL 286 457 0 207 360 40 8 chr10 4206632 4206757 -136110008 + L2 LINE L2 3113 3241 -72 1595 198 10 30 chr10 4207371 4207509 -136109256 + AluJb SINE Alu 1 140 -172 2317 73 3 3 chr10 4207509 4207795 -136108970 + AluSp SINE Alu 24 309 -4 1595 198 10 30 chr10 4207795 4207954 -136108811 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4207983 4208009 -136108756 + AT_rich Low_complexity Low_complexity 1 26 0 554 304 203 14 chr10 4208032 4208387 -136108378 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4209005 4209026 -136107739 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4209029 4209093 -136107672 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4209106 4209190 -136107575 + (TG)n Simple_repeat Simple_repeat 2 85 0 2750 80 3 0 chr10 4210765 4211117 -136105648 - THE1A LTR MaLR -1 354 2 1845 164 0 10 chr10 4211896 4212184 -136104581 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4212184 4212223 -136104542 + (CATA)n Simple_repeat Simple_repeat 2 40 0 282 289 91 5 chr10 4214020 4214207 -136102558 - HAL1 LINE L1 -588 1919 1717 400 270 39 103 chr10 4214270 4214503 -136102262 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4214844 4214891 -136101874 + (TA)n Simple_repeat Simple_repeat 1 47 0 1320 238 127 30 chr10 4215949 4216415 -136100350 + MLT2B2 LTR ERVL 1 511 -4 2174 125 0 3 chr10 4216590 4216981 -136099784 - L1PA10 LINE L1 -570 5598 5209 3813 97 24 0 chr10 4216981 4217518 -136099247 + L1PA10 LINE L1 5618 6168 0 1146 183 0 8 chr10 4217982 4218217 -136098548 - Tigger7 DNA MER2_type 0 2487 2255 254 182 0 0 chr10 4218236 4218280 -136098485 - Tigger7 DNA MER2_type -292 47 4 227 351 55 18 chr10 4218498 4218663 -136098102 - MIR SINE MIR -3 259 89 197 312 56 40 chr10 4220990 4221115 -136095650 + L2 LINE L2 2659 2785 -529 359 268 113 30 chr10 4221145 4221313 -136095452 + MIR SINE MIR 11 192 -70 832 184 5 40 chr10 4221759 4221960 -136094805 - MER39B LTR ERV1 0 653 460 2000 227 39 16 chr10 4221963 4222478 -136094287 + MER87 LTR ERV1 11 537 -4 2504 140 35 22 chr10 4222483 4222939 -136093826 - MER39B LTR ERV1 -191 462 1 970 240 71 73 chr10 4223298 4223831 -136092934 - MER34B LTR ERV1 0 565 34 393 171 0 0 chr10 4225113 4225183 -136091582 + L1MA3 LINE L1 6180 6249 -56 563 141 0 0 chr10 4225186 4225278 -136091487 + L1MA1 LINE L1 6211 6302 0 2002 147 0 3 chr10 4227246 4227566 -136089199 - AluSx SINE Alu 0 312 7 2345 156 54 49 chr10 4228011 4228076 -136088689 - MER34B LTR ERV1 -29 536 473 504 30 0 0 chr10 4228076 4228143 -136088622 + L1PB3 LINE L1 6087 6153 -1 2345 156 54 49 chr10 4228143 4228610 -136088155 - MER34B LTR ERV1 -92 473 1 1826 118 0 0 chr10 4229213 4229458 -136087307 - AluSx SINE Alu -4 308 64 1558 220 66 18 chr10 4231318 4231759 -136085006 + MLT1C LTR MaLR 6 467 0 2586 59 0 0 chr10 4232615 4232919 -136083846 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4233010 4233048 -136083717 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4233754 4233780 -136082985 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4234195 4234239 -136082526 + AT_rich Low_complexity Low_complexity 1 44 0 1434 228 25 11 chr10 4234679 4235038 -136081727 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4235194 4235221 -136081544 + AT_rich Low_complexity Low_complexity 1 27 0 581 287 75 37 chr10 4235852 4236308 -136080457 - L1ME3 LINE L1 -211 6020 5548 450 67 0 0 chr10 4236414 4236474 -136080291 + Alu SINE Alu 232 291 -18 275 208 0 56 chr10 4236477 4236549 -136080216 + MIR SINE MIR 172 239 -23 264 286 0 0 chr10 4236557 4236613 -136080152 + MIR SINE MIR 200 255 -7 1649 158 0 58 chr10 4236721 4237032 -136079733 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4237033 4237102 -136079663 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4237815 4237962 -136078803 + (CA)n Simple_repeat Simple_repeat 1 147 0 2586 64 0 0 chr10 4237994 4238305 -136078460 - AluY SINE Alu 0 311 1 1913 301 53 50 chr10 4238330 4239257 -136077508 + L2 LINE L2 584 1513 -1801 458 224 0 20 chr10 4239272 4239470 -136077295 - L1ME3 LINE L1 -778 5533 5163 723 205 0 0 chr10 4239478 4239605 -136077160 - FLAM_C SINE Alu -16 127 1 1898 250 51 38 chr10 4239605 4240392 -136076373 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4240398 4240979 -136075786 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4240979 4241368 -136075397 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4241368 4241657 -136075108 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4241654 4241954 -136074811 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4241995 4242794 -136073971 - L1ME3 LINE L1 -5381 1015 194 735 135 7 85 chr10 4242903 4243044 -136073721 + AluSg/x SINE Alu 166 295 -15 316 309 98 5 chr10 4245150 4245196 -136071569 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4245196 4245474 -136071291 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4245474 4245621 -136071144 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4246543 4246830 -136069935 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4246954 4247011 -136069754 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4247068 4247456 -136069309 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4247819 4247946 -136068819 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4248095 4248311 -136068454 + AluSg/x SINE Alu 72 298 -12 1264 187 112 37 chr10 4248446 4248767 -136067998 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4248923 4248998 -136067767 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4249033 4249088 -136067677 + (TA)n Simple_repeat Simple_repeat 1 55 0 241 322 154 43 chr10 4249098 4249306 -136067459 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4249686 4249747 -136067018 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4249763 4249945 -136066820 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1858 169 3 19 chr10 4249953 4250260 -136066505 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4250424 4250500 -136066265 + CT-rich Low_complexity Low_complexity 1 76 0 272 250 0 28 chr10 4250530 4250553 -136066212 + MER3 DNA MER1_type 27 47 -162 632 259 52 5 chr10 4250553 4250746 -136066019 - MER3 DNA MER1_type 0 209 8 506 398 46 16 chr10 4250947 4251445 -136065320 + L3 LINE CR1 929 1441 -136 2025 128 3 0 chr10 4251539 4251847 -136064918 + AluSx SINE Alu 1 309 0 1503 183 44 24 chr10 4252179 4252516 -136064249 - MLT1C LTR MaLR 0 467 118 526 168 19 9 chr10 4252516 4252623 -136064142 - AluJb SINE Alu -13 299 192 642 142 8 90 chr10 4252623 4252757 -136064008 - MLT1C LTR MaLR -267 123 1 353 326 54 32 chr10 4252848 4253161 -136063604 + L2 LINE L2 2709 3022 -250 398 311 190 6 chr10 4253276 4253607 -136063158 + L1ME2 LINE L1 5728 6119 -45 413 130 0 0 chr10 4255333 4255402 -136061363 + MER66B LTR ERV1 418 486 0 2063 154 0 0 chr10 4255491 4255789 -136060976 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4255834 4255855 -136060910 + AT_rich Low_complexity Low_complexity 1 21 0 2242 120 0 0 chr10 4255871 4256170 -136060595 - AluSx SINE Alu -13 299 1 719 319 107 18 chr10 4258073 4258730 -136058035 - L2 LINE L2 -298 3015 2294 640 105 11 0 chr10 4259307 4259402 -136057363 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4259402 4259427 -136057338 + AT_rich Low_complexity Low_complexity 1 25 0 3586 172 12 10 chr10 4259881 4260572 -136056193 - L1MB7 LINE L1 -9 6175 5484 326 90 254 0 chr10 4260588 4260655 -136056110 + L1MB3 LINE L1 6081 6164 -19 2789 102 0 10 chr10 4260675 4261087 -136055678 - L1PB1 LINE L1 0 6151 5744 657 296 66 84 chr10 4261498 4261950 -136054815 + MLT1J2 LTR MaLR 2 445 -5 1377 236 53 63 chr10 4262380 4262950 -136053815 + MER34B LTR ERV1 3 565 0 344 284 60 8 chr10 4263039 4263173 -136053592 - L2 LINE L2 0 3272 3132 217 384 15 8 chr10 4265480 4265613 -136051152 - L2 LINE L2 -6 3266 3133 352 303 21 14 chr10 4265735 4265877 -136050888 + MIR SINE MIR 86 228 -34 194 292 0 15 chr10 4266351 4266416 -136050349 - MIR SINE MIR 0 262 199 236 307 13 0 chr10 4266519 4266594 -136050171 - MIR SINE MIR -82 180 105 2222 128 0 0 chr10 4267957 4268263 -136048502 + AluSx SINE Alu 1 306 -6 1222 132 57 0 chr10 4268477 4268689 -136048076 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4269279 4269316 -136047449 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4269365 4269386 -136047379 + AT_rich Low_complexity Low_complexity 1 21 0 399 330 61 45 chr10 4269820 4270150 -136046615 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4270181 4270203 -136046562 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4270275 4270416 -136046349 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4270416 4270463 -136046302 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4270463 4270650 -136046115 + L1MC/D LINE L1 1042 1223 -4896 342 316 134 20 chr10 4270785 4271181 -136045584 + L1MC/D LINE L1 2806 3246 -2883 527 121 165 0 chr10 4271182 4271273 -136045492 + AluSc SINE Alu 155 260 -49 400 349 27 36 chr10 4271397 4271727 -136045038 + L1MC/D LINE L1 4943 5269 -860 485 328 54 20 chr10 4271760 4272166 -136044599 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4273512 4273884 -136042881 + L1ME3A LINE L1 677 1057 -5473 2068 120 3 23 chr10 4274002 4274338 -136042427 + AluSx SINE Alu 1 312 0 364 286 5 43 chr10 4274481 4274666 -136042099 + L1ME3A LINE L1 1410 1587 -4943 247 340 28 0 chr10 4274828 4274934 -136041831 + L1ME3A LINE L1 1686 1794 -4748 321 289 117 49 chr10 4275299 4275565 -136041200 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4275660 4275923 -136040842 + L1ME3A LINE L1 3815 4089 -2451 687 307 63 8 chr10 4275988 4276353 -136040412 + L1ME3A LINE L1 4233 4617 -1923 366 318 90 67 chr10 4276440 4276931 -136039834 + L1ME3A LINE L1 4735 5236 -1304 829 141 33 0 chr10 4277355 4277476 -136039289 - FLAM_C SINE Alu -18 125 1 5349 163 22 9 chr10 4278411 4279390 -136037375 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4281035 4281085 -136035680 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4281885 4281920 -136034845 + AT_rich Low_complexity Low_complexity 1 35 0 940 287 138 14 chr10 4282666 4283181 -136033584 + L1ME3A LINE L1 5977 6555 -9 285 281 104 18 chr10 4283177 4283341 -136033424 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4283977 4287020 -136029745 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4287030 4287724 -136029041 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4287856 4288301 -136028464 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4288674 4288805 -136027960 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4288828 4289120 -136027645 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4289147 4289220 -136027545 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4289689 4290109 -136026656 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4290381 4290446 -136026319 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4290591 4290709 -136026056 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4291290 4291370 -136025395 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4292035 4292078 -136024687 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4292290 4292331 -136024434 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4292729 4292749 -136024016 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4292751 4292906 -136023859 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4292906 4292937 -136023828 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4292937 4293063 -136023702 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4293065 4293204 -136023561 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4293512 4293757 -136023008 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4296716 4296853 -136019912 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4297158 4297378 -136019387 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4297815 4298180 -136018585 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4298677 4298774 -136017991 - L1PA15 LINE L1 -8 6157 6061 2624 254 49 31 chr10 4298881 4300034 -136016731 - L1M4 LINE L1 -2498 3648 2475 892 251 88 91 chr10 4300094 4300843 -136015922 - L1MCb LINE L1 -5298 747 1 193 320 13 13 chr10 4301871 4301946 -136014819 + L2 LINE L2 3195 3269 -3 311 295 32 0 chr10 4302723 4302818 -136013947 - MER5A DNA MER1_type -79 110 13 433 250 52 0 chr10 4303060 4303176 -136013589 + MIR SINE MIR 111 232 -30 1553 154 33 46 chr10 4303255 4303561 -136013204 - AluJb SINE Alu -10 302 1 719 250 5 21 chr10 4303602 4303790 -136012975 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4304373 4304401 -136012364 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2154 117 0 0 chr10 4305277 4305608 -136011157 + AluSx SINE Alu 1 331 0 194 310 23 11 chr10 4306359 4306446 -136010319 - L2 LINE L2 -462 2852 2765 1279 199 153 3 chr10 4307705 4308006 -136008759 + MER7A DNA MER2_type 3 346 0 616 296 151 20 chr10 4308016 4308414 -136008351 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4308561 4308612 -136008153 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4309686 4309827 -136006938 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1845 104 7 0 chr10 4311141 4311411 -136005354 + THE1B LTR MaLR 93 364 0 1478 220 24 69 chr10 4311630 4312093 -136004672 - MLT2B1 LTR ERVL -74 446 5 2099 118 0 0 chr10 4312202 4312520 -136004245 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4313051 4313084 -136003681 + AT_rich Low_complexity Low_complexity 1 33 0 248 312 109 18 chr10 4313715 4313991 -136002774 + L1ME2 LINE L1 4950 5250 -896 600 326 59 25 chr10 4313992 4314581 -136002184 + L1ME LINE L1 29 637 -5433 263 301 0 0 chr10 4314815 4314908 -136001857 + L1ME LINE L1 537 629 -5441 255 312 0 0 chr10 4314927 4315020 -136001745 + L1ME LINE L1 537 629 -5441 812 229 41 28 chr10 4315047 4315410 -136001355 + L1ME LINE L1 545 912 -5158 723 265 59 97 chr10 4315414 4316021 -136000744 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4316091 4316119 -136000646 + AT_rich Low_complexity Low_complexity 1 28 0 1745 149 3 21 chr10 4317812 4318094 -135998671 + AluJb SINE Alu 1 277 -35 180 273 146 0 chr10 4319704 4319759 -135997006 + MIR SINE MIR 57 119 -143 326 184 23 35 chr10 4319977 4320064 -135996701 + MER89 LTR ERV1 1 86 -473 280 210 105 24 chr10 4320038 4320162 -135996603 + MER89 LTR ERV1 197 330 -229 * 1878 160 77 34 chr10 4320958 4321468 -135995297 + MLT2A2 LTR ERVL 3 554 0 1012 220 118 32 chr10 4321540 4321913 -135994852 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4323545 4323617 -135993148 + (TA)n Simple_repeat Simple_repeat 1 72 0 6962 35 3 0 chr10 4324312 4325531 -135991234 - L1PA4 LINE L1 -20 6135 4913 803 278 81 17 chr10 4327197 4327557 -135989208 - L1ME3A LINE L1 -5 6165 5783 529 288 127 22 chr10 4327561 4327828 -135988937 - L1ME3A LINE L1 -423 5747 5453 1551 187 57 3 chr10 4330638 4331000 -135985765 - MLT1B LTR MaLR -14 453 1 2457 54 0 3 chr10 4331491 4331788 -135984977 - AluY SINE Alu -15 296 1 781 194 0 8 chr10 4332534 4332668 -135984097 + FLAM_C SINE Alu 1 133 -10 2174 102 0 10 chr10 4332682 4332977 -135983788 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4333233 4333300 -135983465 + AT_rich Low_complexity Low_complexity 1 67 0 462 260 46 4 chr10 4333447 4333619 -135983146 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4335702 4335726 -135981039 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4336143 4336213 -135980552 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4336439 4336507 -135980258 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4337001 4337023 -135979742 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4337693 4338005 -135978760 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4338090 4338112 -135978653 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4338267 4338475 -135978290 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4338751 4339189 -135977576 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4339451 4340061 -135976704 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4341398 4341430 -135975335 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4341891 4342145 -135974620 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4342687 4342850 -135973915 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4343482 4343622 -135973143 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4343666 4343713 -135973052 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4343821 4344000 -135972765 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4344003 4344050 -135972715 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4344060 4344235 -135972530 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4346367 4346523 -135970242 - MER117 DNA MER1_type -5 192 30 515 191 15 15 chr10 4349787 4349918 -135966847 + CT-rich Low_complexity Low_complexity 1 180 0 1370 196 9 82 chr10 4349918 4350249 -135966516 - AluJb SINE Alu -5 307 1 214 339 161 37 chr10 4350631 4350985 -135965780 - L3 LINE CR1 -761 816 419 198 303 76 41 chr10 4351627 4351772 -135964993 + L2 LINE L2 2380 2529 -785 199 356 29 10 chr10 4354313 4354417 -135962348 + L2 LINE L2 3164 3269 -3 350 194 37 46 chr10 4354724 4354832 -135961933 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4355267 4355289 -135961476 + AT_rich Low_complexity Low_complexity 1 22 0 265 293 17 17 chr10 4355487 4355603 -135961162 + LTR67 LTR ERVL 429 544 -13 217 241 37 19 chr10 4355617 4355671 -135961094 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4356209 4356319 -135960446 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4356342 4356507 -135960258 + (CA)n Simple_repeat Simple_repeat 1 167 0 2853 227 24 27 chr10 4357175 4357885 -135958880 + L1MB5 LINE L1 5431 6138 -36 266 185 15 15 chr10 4359722 4359787 -135956978 + MER4-int LTR ERV1 1102 1166 -5432 188 167 21 0 chr10 4359809 4359857 -135956908 + (TG)n Simple_repeat Simple_repeat 2 50 0 401 133 13 0 chr10 4360112 4360187 -135956578 + GA-rich Low_complexity Low_complexity 3 78 0 2247 107 0 0 chr10 4361143 4361432 -135955333 - AluSq SINE Alu -24 289 1 255 267 0 0 chr10 4361521 4361581 -135955184 + (TG)n Simple_repeat Simple_repeat 1 60 0 250 194 30 0 chr10 4361581 4361648 -135955117 + (TA)n Simple_repeat Simple_repeat 2 70 0 227 152 0 0 chr10 4361648 4361694 -135955071 - LTR66 LTR ERVL -171 439 394 209 186 35 12 chr10 4361793 4361879 -135954886 + (TA)n Simple_repeat Simple_repeat 2 89 0 299 198 23 47 chr10 4362430 4362516 -135954249 - L1MEc LINE L1 -6274 122 39 2431 51 7 0 chr10 4363940 4364235 -135952530 + AluY SINE Alu 1 297 -14 1138 219 100 14 chr10 4364855 4365210 -135951555 - MLT1C LTR MaLR 0 467 81 911 83 0 0 chr10 4365210 4365331 -135951434 + L1PA13 LINE L1 6030 6150 -13 941 203 0 0 chr10 4365341 4365504 -135951261 + FRAM SINE Alu 1 160 -16 233 121 0 0 chr10 4365517 4365550 -135951215 - MER65A LTR ERV1 -218 227 195 279 234 39 0 chr10 4365558 4365635 -135951130 - MLT1C LTR MaLR -387 80 1 184 352 159 27 chr10 4365989 4366361 -135950404 + L2 LINE L2 2319 2739 -575 1298 191 88 27 chr10 4366471 4366801 -135949964 - MLT1A1 LTR MaLR 0 365 16 255 335 113 38 chr10 4366959 4367198 -135949567 + L2 LINE L2 3003 3259 -54 1195 233 92 85 chr10 4369705 4370315 -135946450 - MLT1E3 LTR MaLR -2 622 9 1641 194 10 0 chr10 4370319 4370613 -135946152 + AluJo SINE Alu 1 297 -15 3141 171 86 21 chr10 4370742 4371420 -135945345 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4372035 4372070 -135944695 + AT_rich Low_complexity Low_complexity 1 35 0 2312 103 0 3 chr10 4372639 4372951 -135943814 - AluSq SINE Alu -2 311 1 3592 235 104 16 chr10 4373861 4375068 -135941697 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4376302 4376335 -135940430 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4376626 4376713 -135940052 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 240 47 130 chr10 4376723 4376795 -135939970 + MIR SINE MIR 88 164 -98 1581 197 13 7 chr10 4376795 4377095 -135939670 + AluJo SINE Alu 1 302 -10 184 240 47 130 chr10 4377095 4377202 -135939563 + MIR SINE MIR 164 256 -6 189 213 0 0 chr10 4377405 4377452 -135939313 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4378713 4378754 -135938011 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4379469 4379493 -135937272 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4379770 4379792 -135936973 + AT_rich Low_complexity Low_complexity 1 22 0 4336 252 69 55 chr10 4379852 4380037 -135936728 - L1MB7 LINE L1 0 6184 6003 1494 28 0 11 chr10 4380037 4380219 -135936546 + L1PA3 LINE L1 5976 6155 0 4336 252 69 55 chr10 4380219 4380661 -135936104 - L1MB7 LINE L1 -181 6003 5568 1818 149 0 17 chr10 4380661 4380962 -135935803 - AluJo SINE Alu -16 296 1 4336 252 69 55 chr10 4380962 4383376 -135933389 - L1MB7 LINE L1 -616 5568 3188 1677 166 3 21 chr10 4383376 4383695 -135933070 + AluJb SINE Alu 1 314 0 4336 252 69 55 chr10 4383695 4384578 -135932187 - L1MB7 LINE L1 -2996 3188 3784 2059 144 32 16 chr10 4384578 4384947 -135931818 + THE1C LTR MaLR 1 375 0 4336 252 69 55 chr10 4384947 4385313 -135931452 - L1MB7 LINE L1 -2399 3785 3425 6032 249 44 50 chr10 4385428 4388075 -135928690 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4388123 4388224 -135928541 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4388247 4388541 -135928224 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4388770 4389069 -135927696 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4389412 4389569 -135927196 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4389844 4390142 -135926623 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4390166 4390626 -135926139 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4390626 4390840 -135925925 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4390840 4391216 -135925549 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4391860 4392267 -135924498 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4396921 4397183 -135919582 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4397982 4399282 -135917483 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4399288 4399787 -135916978 - Tigger1 DNA MER2_type -1928 490 1 206 285 159 46 chr10 4400720 4400871 -135915894 + L3 LINE CR1 280 447 -1130 355 255 150 13 chr10 4400928 4401081 -135915684 - L2 LINE L2 -12 3301 3128 381 266 94 47 chr10 4401833 4402130 -135914635 - MLT1J LTR MaLR -7 504 194 522 273 78 7 chr10 4403549 4403857 -135912908 - L1MB7 LINE L1 -2951 3195 2866 5150 80 11 23 chr10 4403862 4404647 -135912118 + L1PA8A LINE L1 5355 6130 -1 441 314 7 37 chr10 4404650 4404839 -135911926 - L1MB7 LINE L1 -3267 2879 2696 28 61 0 0 chr10 4404903 4404952 -135911813 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4405603 4405660 -135911105 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4405692 4405797 -135910968 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4405798 4405825 -135910940 + (CA)n Simple_repeat Simple_repeat 2 28 0 2147 125 3 0 chr10 4406666 4406962 -135909803 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4406962 4407090 -135909675 + (TA)n Simple_repeat Simple_repeat 1 140 0 446 313 98 9 chr10 4407836 4408060 -135908705 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4408360 4408384 -135908381 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4410902 4410932 -135905833 + (CA)n Simple_repeat Simple_repeat 2 31 0 183 227 78 109 chr10 4411220 4411348 -135905417 + L2 LINE L2 2552 2675 -639 3430 158 39 2 chr10 4411716 4412328 -135904437 - MER41B LTR ERV1 0 635 1 230 329 61 0 chr10 4412362 4412444 -135904321 + L2 LINE L2 3209 3295 -18 1472 189 0 0 chr10 4412581 4412846 -135903919 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4413162 4413196 -135903569 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4413398 4413462 -135903303 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3381 154 48 9 chr10 4415967 4416598 -135900167 - L1PA15 LINE L1 -7 6158 5504 2213 112 3 0 chr10 4417055 4417359 -135899406 - AluSx SINE Alu -7 305 1 268 318 91 0 chr10 4417581 4417691 -135899074 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4418247 4418363 -135898402 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4418815 4418972 -135897793 + (TA)n Simple_repeat Simple_repeat 1 149 0 253 323 42 37 chr10 4419912 4420101 -135896664 - L2 LINE L2 0 3313 3124 722 214 11 32 chr10 4420157 4420344 -135896421 - MER58A DNA MER1_type -40 184 2 501 359 38 23 chr10 4420388 4420650 -135896115 - L2 LINE L2 -244 3069 2804 242 275 44 0 chr10 4421063 4421154 -135895611 - L1MEc LINE L1 -3730 2485 2391 4713 165 32 5 chr10 4421167 4422184 -135894581 - L1PA16 LINE L1 -9 6157 5116 537 260 34 15 chr10 4422218 4422483 -135894282 - L1MEc LINE L1 -3992 2404 2135 357 261 60 19 chr10 4422643 4422858 -135893907 - L1MEc LINE L1 -5320 1076 853 3507 127 32 18 chr10 4472860 4473458 -135843307 - MER4B LTR ERV1 -4 606 1 201 239 204 23 chr10 4473461 4473549 -135843216 - L2 LINE L2 -1084 2230 2127 930 314 192 39 chr10 4473643 4474499 -135842266 - L2 LINE L2 -1359 1955 969 1598 247 89 21 chr10 4474561 4475088 -135841677 + MLT1E2 LTR MaLR 63 625 -1 201 360 23 23 chr10 4475129 4475301 -135841464 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4476518 4476566 -135840199 + L2 LINE L2 3207 3254 -18 323 259 36 9 chr10 4478596 4478708 -135838057 - MIR3 SINE MIR -5 203 89 305 243 75 56 chr10 4479140 4479247 -135837518 + HAL1 LINE L1 1914 2022 -485 1848 289 128 40 chr10 4479327 4480535 -135836230 - L2 LINE L2 -365 2949 1635 274 268 106 7 chr10 4481066 4481208 -135835557 + HAL1 LINE L1 2243 2398 -109 207 167 0 0 chr10 4481987 4482029 -135834736 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4482349 4482369 -135834396 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4482693 4482772 -135833993 + (TA)n Simple_repeat Simple_repeat 2 79 0 1020 171 6 0 chr10 4483361 4483536 -135833229 - L1PB3 LINE L1 -11 6143 5968 191 357 10 20 chr10 4484027 4484125 -135832640 + L2 LINE L2 3141 3237 -35 1906 159 12 18 chr10 4484159 4484672 -135832093 + MER39B LTR ERV1 1 603 -50 863 163 182 36 chr10 4484672 4484964 -135831801 - MER61C LTR ERV1 0 434 1 23 0 0 0 chr10 4485351 4485374 -135831391 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr10 4487584 4487620 -135829145 + AT_rich Low_complexity Low_complexity 1 36 0 1315 102 0 0 chr10 4488085 4488287 -135828478 - AluSg/x SINE Alu 0 318 117 235 152 121 15 chr10 4488746 4488812 -135827953 - MIR SINE MIR -33 229 157 1025 126 7 0 chr10 4490690 4490841 -135825924 + AluSp SINE Alu 1 152 -161 1161 86 0 7 chr10 4491101 4491252 -135825513 - AluSp/q SINE Alu -10 303 154 241 211 125 79 chr10 4491363 4491515 -135825250 + L1MC5 LINE L1 7752 7910 -51 1999 142 0 7 chr10 4491655 4491999 -135824766 - AluSx SINE Alu 0 312 1 443 117 0 0 chr10 4492090 4492167 -135824598 + L1PA13 LINE L1 5939 6015 -148 687 39 39 0 chr10 4492359 4492461 -135824304 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 319 308 112 14 chr10 4492470 4492684 -135824081 + L1MEc LINE L1 1925 2159 -4237 732 310 29 55 chr10 4492710 4493094 -135823671 - MLT1B LTR MaLR -16 374 1 357 234 5 101 chr10 4493140 4493328 -135823437 + L1MEc LINE L1 2209 2378 -4018 367 268 87 0 chr10 4493454 4493581 -135823184 - MLT1F1 LTR MaLR -428 139 2 21 0 0 0 chr10 4494598 4494619 -135822146 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4495534 4495560 -135821205 + AT_rich Low_complexity Low_complexity 1 26 0 886 205 13 0 chr10 4496015 4496171 -135820594 - AluJo SINE Alu -147 165 8 21 0 0 0 chr10 4498228 4498249 -135818516 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4498285 4498329 -135818436 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 232 313 56 49 chr10 4501995 4502139 -135814626 - MIR SINE MIR -21 241 97 266 256 13 13 chr10 4502292 4502370 -135814395 + MIR SINE MIR 184 261 -1 352 240 16 33 chr10 4502908 4503029 -135813736 - L1MC4a LINE L1 -1875 5933 5815 219 328 0 0 chr10 4503061 4503119 -135813646 - L2 LINE L2 -4 3268 3211 498 203 105 28 chr10 4503427 4503570 -135813195 + MER50 LTR ERV1 10 163 -571 1142 127 35 119 chr10 4504270 4504640 -135812125 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4505861 4506690 -135810075 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4507666 4507747 -135809018 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4507749 4507795 -135808970 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4508107 4508280 -135808485 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4509258 4509288 -135807477 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4509404 4509564 -135807201 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4509561 4510089 -135806676 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4510089 4510404 -135806361 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4510404 4510422 -135806343 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4510687 4510730 -135806035 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4511206 4511502 -135805263 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4512218 4512515 -135804250 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4512806 4513641 -135803124 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4513720 4514016 -135802749 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4514016 4514245 -135802520 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4514263 4514313 -135802452 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4514323 4516282 -135800483 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4516355 4516638 -135800127 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4517415 4517645 -135799120 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4518759 4518784 -135797981 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4519171 4519200 -135797565 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4520362 4520386 -135796379 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4520748 4520776 -135795989 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4520776 4521119 -135795646 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4521119 4521538 -135795227 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4521969 4522396 -135794369 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4523460 4523650 -135793115 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4524535 4524654 -135792111 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4524746 4524922 -135791843 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4526373 4526609 -135790156 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4527059 4527373 -135789392 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4527373 4527437 -135789328 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4527451 4527581 -135789184 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4527610 4527757 -135789008 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4529721 4529990 -135786775 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4530106 4530133 -135786632 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4530297 4530599 -135786166 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4531189 4531360 -135785405 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4531438 4531467 -135785298 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4531665 4532002 -135784763 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4532364 4532543 -135784222 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4532551 4532835 -135783930 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4532943 4533175 -135783590 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4533231 4533585 -135783180 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4533585 4533879 -135782886 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4533879 4533952 -135782813 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4534104 4534430 -135782335 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4534453 4535814 -135780951 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4536895 4536987 -135779778 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4537820 4538016 -135778749 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4538010 4538239 -135778526 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4538341 4538832 -135777933 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4539364 4539421 -135777344 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4539579 4539630 -135777135 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4542069 4542386 -135774379 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4543601 4543636 -135773129 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4544780 4545225 -135771540 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4547079 4547158 -135769607 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4549978 4550408 -135766357 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4551516 4551567 -135765198 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4552028 4552187 -135764578 + (TA)n Simple_repeat Simple_repeat 1 163 0 1286 220 55 52 chr10 4552197 4552560 -135764205 - MLT2D LTR ERVL -40 374 11 842 210 66 0 chr10 4553483 4553664 -135763101 - LTR26 LTR ERV1 0 603 411 958 287 22 0 chr10 4553939 4554214 -135762551 - MER45C DNA AcHobo -671 282 2 1793 180 91 29 chr10 4556777 4557194 -135759571 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4560471 4560687 -135756078 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4560778 4561090 -135755675 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4561096 4561143 -135755622 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4561261 4561522 -135755243 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4561524 4561676 -135755089 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4562811 4563119 -135753646 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4563719 4563748 -135753017 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4563757 4564131 -135752634 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4564127 4564365 -135752400 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4564348 4564943 -135751822 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4564953 4566010 -135750755 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4566024 4566402 -135750363 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4566408 4566434 -135750331 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4566435 4566593 -135750172 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4566591 4567646 -135749119 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4567636 4567870 -135748895 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4567870 4568270 -135748495 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4568270 4568503 -135748262 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4568503 4568605 -135748160 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4568605 4568715 -135748050 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4568715 4569044 -135747721 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4569044 4569195 -135747570 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4569620 4569653 -135747112 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4569854 4569877 -135746888 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4571323 4571406 -135745359 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4571407 4571831 -135744934 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4571840 4572140 -135744625 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4572140 4572525 -135744240 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4572525 4572586 -135744179 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4573015 4573297 -135743468 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4573297 4573319 -135743446 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4573377 4573427 -135743338 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4573702 4573914 -135742851 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4574074 4574142 -135742623 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4574265 4574522 -135742243 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4574933 4575068 -135741697 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4575448 4575757 -135741008 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4575878 4575902 -135740863 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4576283 4576583 -135740182 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4576722 4576779 -135739986 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4577206 4577521 -135739244 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4578330 4578438 -135738327 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4578473 4578643 -135738122 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4578698 4579062 -135737703 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4579240 4579544 -135737221 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4580917 4580993 -135735772 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4582120 4582411 -135734354 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4584540 4584653 -135732112 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4584653 4584957 -135731808 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4584957 4585954 -135730811 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4585954 4586154 -135730611 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4586154 4586521 -135730244 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4586752 4586872 -135729893 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4588085 4588122 -135728643 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4588596 4588684 -135728081 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4588786 4588862 -135727903 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4588865 4589121 -135727644 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4589844 4590042 -135726723 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4590248 4590311 -135726454 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4590721 4590836 -135725929 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4591392 4591534 -135725231 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4592765 4593059 -135723706 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4594126 4595568 -135721197 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4596254 4596372 -135720393 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4596699 4596804 -135719961 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4596814 4596975 -135719790 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4597915 4598023 -135718742 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4598357 4598415 -135718350 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4598664 4599016 -135717749 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4599277 4599386 -135717379 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4600109 4600398 -135716367 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4600912 4601060 -135715705 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4601114 4601333 -135715432 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4601377 4601507 -135715258 + L1ME3A LINE L1 6020 6167 -3 189 318 102 0 chr10 4602278 4602382 -135714383 + MIR SINE MIR 18 135 -73 28 0 0 0 chr10 4603514 4603542 -135713223 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4603959 4603988 -135712777 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 259 240 144 89 chr10 4603993 4604139 -135712626 + MIR3 SINE MIR 39 192 -16 570 288 0 0 chr10 4604946 4605078 -135711687 + MIR SINE MIR 103 234 -28 265 258 148 13 chr10 4605913 4606068 -135710697 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4606843 4606881 -135709884 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 313 248 44 58 chr10 4606933 4607070 -135709695 + L1ME4a LINE L1 5962 6096 -25 251 309 74 19 chr10 4607336 4607495 -135709270 - MIR3 SINE MIR -25 183 8 2525 121 3 3 chr10 4607922 4608286 -135708479 + THE1B LTR MaLR 1 364 0 348 247 37 0 chr10 4608355 4608436 -135708329 - MER5A DNA MER1_type -68 121 38 229 268 71 0 chr10 4608461 4608517 -135708248 + L2 LINE L2 3162 3221 -51 232 277 84 12 chr10 4609537 4609620 -135707145 - MIR SINE MIR -70 192 104 321 283 121 39 chr10 4609624 4611069 -135705696 + L1M4 LINE L1 3051 4677 -1469 245 216 0 0 chr10 4611079 4611130 -135705635 + L1ME2 LINE L1 6072 6122 -42 193 373 56 32 chr10 4611762 4611888 -135704877 - L2 LINE L2 -5 3267 3139 997 203 30 70 chr10 4612087 4612417 -135704348 + L1MA7 LINE L1 5961 6277 -14 1880 144 7 0 chr10 4612506 4612812 -135703953 - AluJo SINE Alu -4 308 1 277 238 16 16 chr10 4613391 4613454 -135703311 - L2 LINE L2 -9 3263 3201 1965 132 0 0 chr10 4613468 4613741 -135703024 + AluSx SINE Alu 39 311 -1 1051 262 122 10 chr10 4614336 4614741 -135702024 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4614741 4614776 -135701989 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1051 262 122 10 chr10 4614776 4614863 -135701902 + L1MC/D LINE L1 4213 4289 -1857 2423 86 0 0 chr10 4614890 4615191 -135701574 + AluSc SINE Alu 3 303 -6 1413 193 45 0 chr10 4615194 4615458 -135701307 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4615468 4615500 -135701265 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2538 240 51 22 chr10 4615500 4616207 -135700558 + L1MC/D LINE L1 4321 5071 -1249 5224 82 1 0 chr10 4616207 4616900 -135699865 - L1PA8A LINE L1 -12 6119 5426 2538 240 51 22 chr10 4616900 4617420 -135699345 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4620434 4620479 -135696286 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4620648 4620671 -135696094 + AT_rich Low_complexity Low_complexity 1 23 0 1144 259 102 35 chr10 4621288 4621894 -135694871 - MER20B DNA MER1_type -90 693 47 355 320 31 73 chr10 4622004 4622457 -135694308 + L2 LINE L2 1983 2416 -898 627 207 0 0 chr10 4623070 4623210 -135693555 + (TG)n Simple_repeat Simple_repeat 1 140 0 729 246 67 56 chr10 4623342 4623713 -135693052 + Charlie4a DNA MER1_type 43 421 -1540 1588 154 75 27 chr10 4623713 4624005 -135692760 - AluJo SINE Alu -6 306 1 729 246 67 56 chr10 4624005 4624063 -135692702 + Charlie4a DNA MER1_type 421 477 -31 652 251 6 6 chr10 4624256 4624419 -135692346 + MLT1C LTR MaLR 305 467 0 2028 241 51 40 chr10 4624423 4625249 -135691516 + MLT1C-int LTR MaLR 5 884 -487 893 217 30 146 chr10 4625454 4625920 -135690845 + MLT1C-int LTR MaLR 959 1370 -1 355 185 70 135 chr10 4625927 4626127 -135690638 + MLT1C LTR MaLR 7 193 -197 281 254 77 77 chr10 4626266 4626409 -135690356 + MLT1K LTR MaLR 328 473 -115 13919 82 11 1 chr10 4626409 4629104 -135687661 + L1PA7 LINE L1 3440 6154 0 281 254 77 77 chr10 4629104 4629180 -135687585 + MLT1K LTR MaLR 472 547 -41 188 336 40 24 chr10 4629363 4629488 -135687277 - MIR3 SINE MIR -43 165 39 920 9 0 0 chr10 4629743 4629848 -135686917 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4629862 4629906 -135686859 + A-rich Low_complexity Low_complexity 1 44 0 441 273 239 14 chr10 4629933 4630222 -135686543 - L2 LINE L2 0 3272 2919 2575 47 0 22 chr10 4630946 4631264 -135685501 + AluY SINE Alu 1 311 0 2667 206 8 2 chr10 4631408 4631936 -135684829 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4631979 4632005 -135684760 + AT_rich Low_complexity Low_complexity 1 26 0 227 152 0 0 chr10 4632338 4632384 -135684381 - L1ME3 LINE L1 -7 6155 6110 2393 255 129 27 chr10 4632453 4634648 -135682117 - L1ME3 LINE L1 -197 5967 3497 316 171 103 51 chr10 4634767 4634884 -135681881 - L1ME3 LINE L1 -2863 3283 3161 487 265 10 25 chr10 4634887 4635091 -135681674 - L1ME3 LINE L1 -3090 3056 2856 233 238 25 0 chr10 4635189 4635269 -135681496 - L1ME3 LINE L1 -3227 2919 2838 2119 117 10 13 chr10 4635426 4635733 -135681032 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4638145 4638166 -135678599 + AT_rich Low_complexity Low_complexity 1 21 0 506 255 93 32 chr10 4638682 4638929 -135677836 - MIR SINE MIR 0 262 1 192 394 0 14 chr10 4641347 4641418 -135675347 - L2 LINE L2 -86 3186 3117 334 228 196 19 chr10 4643035 4643193 -135673572 - MER5A DNA MER1_type 0 189 4 7924 232 65 52 chr10 4644405 4645038 -135671727 - L1MC3 LINE L1 -2 7783 7160 1450 58 0 0 chr10 4645038 4645209 -135671556 + AluY SINE Alu 1 171 -140 251 91 0 0 chr10 4645210 4645273 -135671492 + AluY SINE Alu 253 315 0 7924 232 65 52 chr10 4645273 4647105 -135669660 - L1MC3 LINE L1 -625 7160 5353 1996 131 40 0 chr10 4647105 4647279 -135669486 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4647279 4647309 -135669456 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1996 131 40 0 chr10 4647309 4647431 -135669334 - AluSx SINE Alu -195 117 1 7924 232 65 52 chr10 4647431 4647783 -135668982 - L1MC3 LINE L1 -2432 5353 5007 1230 138 20 5 chr10 4647783 4647986 -135668779 - L1PB1 LINE L1 -1 6150 5945 7924 232 65 52 chr10 4647986 4649291 -135667474 - L1MC3 LINE L1 -2778 5007 3564 895 232 34 0 chr10 4649398 4649661 -135667104 + L1MA4 LINE L1 6025 6296 -4 290 240 145 70 chr10 4649818 4650018 -135666747 - HAL1 LINE L1 -2288 219 5 233 239 128 60 chr10 4650976 4651093 -135665672 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4652684 4652709 -135664056 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4655297 4655386 -135661379 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4655604 4655634 -135661131 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4655644 4655712 -135661053 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4656051 4656104 -135660661 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4656717 4656770 -135659995 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4657701 4657801 -135658964 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4657877 4658212 -135658553 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4658624 4658974 -135657791 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4658997 4659153 -135657612 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4660272 4660757 -135656008 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4660762 4660814 -135655951 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4660967 4661094 -135655671 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4661614 4661673 -135655092 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4661675 4661854 -135654911 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4662030 4662079 -135654686 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4663305 4663627 -135653138 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4663627 4663920 -135652845 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4663920 4663966 -135652799 - L1MB3 LINE L1 -321 5862 5817 204 355 16 32 chr10 4666169 4666293 -135650472 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4666401 4666773 -135649992 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4671310 4671392 -135645373 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4672382 4672405 -135644360 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4672407 4673127 -135643638 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4673135 4674545 -135642220 - L1M3b LINE L1 -4870 1411 1 1392 257 84 53 chr10 4675969 4677089 -135639676 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4677092 4677394 -135639371 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4677469 4678299 -135638466 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4678308 4679089 -135637676 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4679120 4679151 -135637614 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4679150 4679176 -135637589 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4679247 4679414 -135637351 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4679415 4680377 -135636388 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4680368 4680975 -135635790 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4680975 4681270 -135635495 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4681270 4682119 -135634646 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4682722 4682766 -135633999 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4685559 4685770 -135630995 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4685783 4685821 -135630944 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4686150 4686385 -135630380 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4686446 4686546 -135630219 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4686566 4686738 -135630027 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4686738 4686776 -135629989 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4686799 4686892 -135629873 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4688065 4688211 -135628554 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4688318 4688343 -135628422 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4689038 4689085 -135627680 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4689139 4689440 -135627325 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4689465 4689876 -135626889 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4689876 4690535 -135626230 + L1M4 LINE L1 2735 3486 -2660 4881 138 32 43 chr10 4690639 4691548 -135625217 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4691692 4692094 -135624671 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4692094 4692452 -135624313 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4692452 4692788 -135623977 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4692790 4692819 -135623946 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4693123 4693152 -135623613 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4695310 4695338 -135621427 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4695338 4696268 -135620497 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4696532 4696901 -135619864 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4696966 4697076 -135619689 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4697262 4697448 -135619317 + AluSp SINE Alu 83 307 -6 1423 158 36 43 chr10 4698480 4698759 -135618006 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4699672 4699804 -135616961 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4699804 4700112 -135616653 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4700112 4700272 -135616493 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4700342 4700364 -135616401 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4700769 4700928 -135615837 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4701042 4701119 -135615646 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4701146 4701197 -135615568 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4701293 4702050 -135614715 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4702769 4702921 -135613844 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4703287 4703459 -135613306 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4703715 4703875 -135612890 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4706599 4706627 -135610138 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4707314 4707414 -135609351 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4707648 4707684 -135609081 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4708057 4708199 -135608566 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4710291 4710750 -135606015 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4710750 4711154 -135605611 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4711156 4711282 -135605483 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4711289 4711477 -135605288 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4711721 4711855 -135604910 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4712383 4712409 -135604356 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4712953 4713839 -135602926 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4713965 4714024 -135602741 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4714024 4714500 -135602265 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4714523 4714663 -135602102 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4714694 4714970 -135601795 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4714970 4715173 -135601592 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4715183 4715414 -135601351 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4715414 4715576 -135601189 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4715585 4715777 -135600988 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4715777 4715998 -135600767 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4715998 4716234 -135600531 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4716240 4716643 -135600122 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4716643 4716927 -135599838 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4716927 4719207 -135597558 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4719224 4720177 -135596588 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4720698 4720824 -135595941 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4720824 4721695 -135595070 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4722023 4722071 -135594694 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4723100 4723141 -135593624 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4723227 4723455 -135593310 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4723484 4723911 -135592854 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4723911 4723932 -135592833 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4723932 4724142 -135592623 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4724220 4724757 -135592008 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4724771 4725403 -135591362 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4727313 4727336 -135589429 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4727902 4727957 -135588808 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4728123 4728203 -135588562 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4730052 4730371 -135586394 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4730856 4731617 -135585148 - L2 LINE L2 -411 2903 2067 2054 221 12 0 chr10 4731851 4732250 -135584515 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4732482 4733587 -135583178 + L1MCc LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4733590 4734122 -135582643 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4734122 4734379 -135582386 + L1MCc LINE L1 2863 3115 -3826 683 216 31 0 chr10 4734379 4734541 -135582224 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4734541 4735142 -135581623 + L1MCc LINE L1 3115 3698 -3243 3921 189 15 11 chr10 4735874 4736615 -135580150 + L1PA13 LINE L1 1121 1864 -4923 268 299 49 56 chr10 4736651 4736795 -135579970 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4738688 4738920 -135577845 - L1MA8 LINE L1 -41 6250 5995 732 161 14 21 chr10 4739590 4739733 -135577032 + FRAM SINE Alu 11 152 -24 263 48 0 48 chr10 4740370 4740412 -135576353 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 245 83 33 33 chr10 4740424 4740484 -135576281 + (TTCTCC)n Simple_repeat Simple_repeat 4 63 0 184 30 61 0 chr10 4740707 4740740 -135576025 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4740960 4741011 -135575754 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4741279 4741308 -135575457 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4741334 4741376 -135575389 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4741403 4741504 -135575261 + (TG)n Simple_repeat Simple_repeat 1 101 0 265 362 0 9 chr10 4743127 4743232 -135573533 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4743478 4743887 -135572878 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4743898 4743941 -135572824 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4745958 4746083 -135570682 - L2 LINE L2 -2 3311 3180 773 305 33 63 chr10 4746776 4747205 -135569560 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4747927 4747990 -135568775 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4748574 4748883 -135567882 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4750866 4750902 -135565863 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4751470 4751766 -135564999 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4752017 4752140 -135564625 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4752818 4753214 -135563551 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4754341 4754418 -135562347 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4755273 4755590 -135561175 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4755602 4756024 -135560741 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4756054 4756323 -135560442 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4756326 4756933 -135559832 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4756933 4757241 -135559524 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4757241 4758057 -135558708 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4758888 4758936 -135557829 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4759557 4759741 -135557024 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4759785 4759806 -135556959 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4760340 4761259 -135555506 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4761293 4761734 -135555031 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4761739 4762494 -135554271 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4762494 4762779 -135553986 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4762779 4764441 -135552324 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4764451 4764769 -135551996 + MLT1A1 LTR MaLR 11 323 -42 5464 224 69 39 chr10 4764789 4767610 -135549155 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4767623 4767843 -135548922 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4767843 4767993 -135548772 + AluSg/x SINE Alu 154 303 -9 196 368 58 32 chr10 4768294 4768449 -135548316 - MIR SINE MIR -39 223 65 1503 174 102 7 chr10 4769650 4769954 -135546811 + MER1B DNA MER1_type 4 336 -1 2059 126 0 0 chr10 4771333 4771619 -135545146 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4771895 4772025 -135544740 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4773043 4773339 -135543426 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4774047 4775221 -135541544 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4775256 4775379 -135541386 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4775923 4776105 -135540660 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4776138 4776179 -135540586 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4776795 4777155 -135539610 + MSTD LTR MaLR 1 395 -1 225 233 133 27 chr10 4777870 4778020 -135538745 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4778342 4778363 -135538402 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4779278 4779304 -135537461 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4779726 4779802 -135536963 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4782334 4782383 -135534382 + L2 LINE L2 3139 3187 -85 592 263 100 20 chr10 4783936 4784187 -135532578 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4784452 4784762 -135532003 - AluSx SINE Alu 0 312 12 875 284 81 86 chr10 4786772 4787775 -135528990 - L2 LINE L2 -27 3286 2296 2700 160 15 6 chr10 4787880 4788355 -135528410 - MER4B LTR ERV1 0 610 132 943 309 42 32 chr10 4788621 4789483 -135527282 + L1MCa LINE L1 971 2048 -4559 2117 201 21 23 chr10 4789486 4790018 -135526747 - L1MA9 LINE L1 -1 6311 5781 1323 268 47 32 chr10 4790018 4790275 -135526490 + L1MCa LINE L1 2348 2600 -3826 683 216 31 0 chr10 4790275 4790437 -135526328 + L1MB7 LINE L1 6010 6176 -8 1323 268 47 32 chr10 4790437 4791038 -135525727 + L1MCa LINE L1 2600 3183 -3243 3973 188 13 11 chr10 4791757 4792506 -135524259 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4792542 4792686 -135524079 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4794580 4794812 -135521953 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4795482 4795626 -135521139 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4796403 4796432 -135520333 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4796563 4796705 -135520060 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4797373 4797404 -135519361 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4797684 4797706 -135519059 + AT_rich Low_complexity Low_complexity 1 22 0 277 371 9 0 chr10 4798176 4798281 -135518484 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4798292 4798476 -135518289 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4798719 4798869 -135517896 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4799376 4799411 -135517354 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4799938 4800361 -135516404 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4800361 4800673 -135516092 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4800673 4800759 -135516006 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4800825 4801166 -135515599 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4801339 4801635 -135515130 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4801868 4802114 -135514651 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4802143 4802252 -135514513 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4802402 4802515 -135514250 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4802521 4803050 -135513715 + L1ME LINE L1 5157 5683 -483 2280 82 0 22 chr10 4804616 4804961 -135511804 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4805110 4805131 -135511634 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4806419 4806447 -135510318 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4807486 4807576 -135509189 + (CA)n Simple_repeat Simple_repeat 1 89 0 232 233 17 0 chr10 4807728 4807788 -135508977 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4808355 4808378 -135508387 + AT_rich Low_complexity Low_complexity 1 23 0 2221 113 7 0 chr10 4808565 4808856 -135507909 + AluSc SINE Alu 6 298 -11 296 204 12 74 chr10 4808937 4809099 -135507666 + L1MEd LINE L1 1065 1216 -4903 200 189 0 0 chr10 4809146 4809183 -135507582 + (TG)n Simple_repeat Simple_repeat 2 38 0 2286 91 0 0 chr10 4810688 4810985 -135505780 - AluY SINE Alu -14 297 1 558 269 19 31 chr10 4811735 4811988 -135504777 + MER77 LTR ERV1 450 745 -7 2087 241 55 29 chr10 4812019 4812820 -135503945 + MER77-int LTR ERV1 3261 4130 -61 1365 261 83 23 chr10 4813354 4813871 -135502894 + MER77 LTR ERV1 51 598 -7 286 288 16 16 chr10 4813881 4814006 -135502759 + L1MC4 LINE L1 7434 7558 -484 1632 169 20 30 chr10 4814840 4815141 -135501624 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4816231 4816288 -135500477 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4816514 4816536 -135500229 + AT_rich Low_complexity Low_complexity 1 22 0 13426 55 19 3 chr10 4917251 4918900 -135397865 + HERVK14 LTR ERVK 1188 2862 -3083 828 215 52 40 chr10 4918905 4919156 -135397609 - LTR13 LTR ERVK -753 254 1 74304 6 2 3 chr10 4919156 4927282 -135389483 - HERVK13 LTR ERVK 0 8116 1 3800 167 68 67 chr10 4927282 4928235 -135388530 - LTR13 LTR ERVK 0 954 1 354 264 64 9 chr10 4928456 4928566 -135388199 - U8 snRNA snRNA 0 136 21 386 308 0 9 chr10 4930322 4930429 -135386336 + MER68 LTR ERV1 347 452 -110 2213 124 3 0 chr10 4931682 4931989 -135384776 - AluSq SINE Alu -5 308 1 359 62 0 0 chr10 4932572 4932620 -135384145 - pTR5 LTR ERV1 -2046 392 345 8880 94 72 69 chr10 4932720 4935227 -135381538 - pTR5 LTR ERV1 0 8399 504 607 195 43 43 chr10 4935223 4935525 -135381240 - Harlequin LTR ERV1 -5755 1141 840 * 36997 93 21 20 chr10 4935526 4941261 -135375504 - Harlequin LTR ERV1 0 2438 17 28293 42 5 1 chr10 4941362 4944888 -135371877 - L1P2 LINE L1 -695 5460 1921 3634 255 50 32 chr10 4944869 4944965 -135371800 - L1 LINE L1 -2757 3389 3296 * 2026 127 30 10 chr10 4944965 4945265 -135371500 - AluSx SINE Alu -6 306 1 3634 255 50 32 chr10 4945265 4946815 -135369950 - L1 LINE L1 -2850 3296 1670 9009 77 4 2 chr10 4946917 4948059 -135368706 - HERVK14 LTR ERVK -4800 1145 1 2747 61 0 0 chr10 4948059 4948403 -135368362 - LTR14A LTR ERVK 0 344 1 449 260 90 57 chr10 4948421 4948775 -135367990 + L1M4c LINE L1 806 1171 -5213 1252 261 16 13 chr10 4948775 4949081 -135367684 - MST-int LTR MaLR -438 1213 907 36 23 0 0 chr10 4949370 4949413 -135367352 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr10 4950123 4950149 -135366616 + AT_rich Low_complexity Low_complexity 1 26 0 4624 131 57 73 chr10 4950449 4951488 -135365277 + pTR5 LTR ERV1 743 2025 -413 354 172 63 81 chr10 4951488 4951599 -135365166 + LTR30 LTR ERV1 544 724 -70 561 28 42 0 chr10 4951599 4951670 -135365095 + pTR5 LTR ERV1 79 152 -2286 853 264 129 27 chr10 4951670 4951965 -135364800 + L1PA15-16 LINE L1 1237 1561 -5288 3275 244 26 14 chr10 4951995 4952999 -135363766 + L1PA15-16 LINE L1 1598 2705 -4144 33293 46 2 5 chr10 4953108 4957249 -135359516 - L1P LINE L1 -2015 4131 1 6710 204 36 34 chr10 4957249 4958737 -135358028 + HUERS-P3b LTR ERV1 4763 6255 -1163 2080 125 7 3 chr10 4958737 4959032 -135357733 + AluSx SINE Alu 1 296 -16 6710 204 36 34 chr10 4959032 4959230 -135357535 + HUERS-P3b LTR ERV1 6255 6451 -967 1922 199 10 20 chr10 4959343 4959845 -135356920 + HUERS-P3b LTR ERV1 6495 6991 -5 286 187 0 165 chr10 4959869 4959960 -135356805 + MER61E LTR ERV1 36 111 -458 * 506 74 0 25 chr10 4959940 4960021 -135356744 + LTR25 LTR ERV1 215 293 -501 2272 190 69 15 chr10 4960043 4960578 -135356187 + LTR25 LTR ERV1 244 565 -4 231 228 158 40 chr10 4960813 4960914 -135355851 + MIR SINE MIR 150 262 0 2377 87 0 0 chr10 4962321 4962619 -135354146 + AluY SINE Alu 1 298 -13 23 68 0 0 chr10 4962688 4962732 -135354033 + AT_rich Low_complexity Low_complexity 1 44 0 353 350 104 30 chr10 4962867 4963204 -135353561 - L3 LINE CR1 -621 956 595 751 290 70 35 chr10 4963640 4964103 -135352662 + MLT1E LTR MaLR 17 496 -97 1262 295 124 32 chr10 4964301 4965263 -135351502 - L2 LINE L2 -5 3308 2246 853 179 68 8 chr10 4965266 4965500 -135351265 + Tigger1 DNA MER2_type 2171 2418 0 380 276 37 29 chr10 4965515 4965758 -135351007 - L1M4c LINE L1 -3759 2885 2641 6172 190 14 4 chr10 4965827 4967133 -135349632 + L1P5 LINE L1 3795 5114 -1032 29 28 0 0 chr10 4967133 4967169 -135349596 + AT_rich Low_complexity Low_complexity 1 36 0 226 277 0 0 chr10 4967169 4967252 -135349513 + L1 LINE L1 2305 2387 -3759 7918 248 43 7 chr10 4967255 4967836 -135348929 + L1PA16 LINE L1 2440 2999 -3157 2183 108 0 7 chr10 4967836 4968133 -135348632 + AluSg1 SINE Alu 1 295 -14 7918 248 43 7 chr10 4968133 4970532 -135346233 + L1PA16 LINE L1 2999 5534 -622 1417 252 6 6 chr10 4970580 4970945 -135345820 + L1PA16 LINE L1 5784 6148 -18 344 188 36 80 chr10 4971017 4971129 -135345636 - L1M4c LINE L1 -5505 1141 1035 285 258 27 5 chr10 4971180 4971304 -135345461 - L1M4c LINE L1 -5721 925 650 510 144 0 0 chr10 4971654 4971744 -135345021 + L1P5 LINE L1 5420 5509 -647 1966 139 36 0 chr10 4971770 4972071 -135344694 - AluSx SINE Alu 0 312 1 291 176 14 68 chr10 4972071 4972135 -135344630 - U8 snRNA snRNA -74 62 1 2396 94 0 0 chr10 4973908 4974207 -135342558 - AluSg SINE Alu -11 299 1 639 206 75 45 chr10 4974256 4974523 -135342242 - ORSL DNA AcHobo 0 275 1 469 178 22 0 chr10 4975272 4975362 -135341403 - MLT1D LTR MaLR -413 92 1 236 247 124 22 chr10 4976737 4976826 -135339939 + MIR SINE MIR 88 185 -77 202 316 158 0 chr10 4977692 4977806 -135338959 + L3 LINE CR1 1361 1492 -85 926 185 40 0 chr10 4978256 4978429 -135338336 + AluJo SINE Alu 85 264 -48 422 209 39 39 chr10 4978911 4979064 -135337701 - L1M4 LINE L1 -895 5487 5335 1468 237 95 13 chr10 4979066 4979518 -135337247 - ERVL LTR ERVL -5274 490 2 324 0 0 0 chr10 4979557 4979593 -135337172 + (TG)n Simple_repeat Simple_repeat 2 37 0 1662 203 63 5 chr10 4979604 4979641 -135337124 + Tigger1 DNA MER2_type 2018 2051 -367 216 0 0 0 chr10 4979641 4979665 -135337100 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1662 203 63 5 chr10 4979665 4980006 -135336759 + Tigger1 DNA MER2_type 2051 2418 0 1114 245 31 36 chr10 4980045 4980271 -135336494 - L1M4 LINE L1 -3784 2598 2372 1322 212 74 15 chr10 4980271 4980596 -135336169 + MER7A DNA MER2_type 4 345 -1 1114 245 31 36 chr10 4980596 4980966 -135335799 - L1M4 LINE L1 -4010 2372 2002 2207 114 0 7 chr10 4980986 4981284 -135335481 - AluY SINE Alu -15 296 1 1522 249 10 25 chr10 4981327 4981844 -135334921 - L1M4 LINE L1 -4538 1846 1338 673 134 25 17 chr10 4981861 4981980 -135334785 - L1PA15 LINE L1 -2 6163 6044 365 88 118 0 chr10 4981980 4982030 -135334735 + L1PA15 LINE L1 6084 6159 -6 2194 147 47 37 chr10 4982146 4982575 -135334190 + LTR3b LTR ERVK 1 433 -4 12738 129 39 31 chr10 4983017 4985303 -135331462 + MER4-int LTR ERV1 3837 6140 -458 1020 208 21 62 chr10 4985343 4985680 -135331085 - MER31A LTR ERV1 -162 323 1 2683 159 64 12 chr10 4986014 4986580 -135330185 - LTR49 LTR ERV1 0 595 1 248 242 100 23 chr10 4986598 4986617 -135330148 + MER5B DNA MER1_type 59 75 -103 2283 76 0 3 chr10 4986617 4986908 -135329857 + AluY SINE Alu 1 290 -21 248 242 100 23 chr10 4986908 4987005 -135329760 + MER5B DNA MER1_type 75 174 -4 270 159 0 0 chr10 4987637 4987681 -135329084 + LTR32 LTR ERVL 15 58 -413 257 145 194 0 chr10 4987679 4987741 -135329024 + LTR32 LTR ERVL 15 88 -383 * 315 104 224 0 chr10 4987715 4987782 -135328983 + LTR32 LTR ERVL 6 87 -384 238 177 194 0 chr10 4987763 4987825 -135328940 + LTR32 LTR ERVL 15 88 -383 * 277 136 0 0 chr10 4987805 4987849 -135328916 + LTR32 LTR ERVL 15 58 -413 251 145 194 0 chr10 4987847 4987909 -135328856 + LTR32 LTR ERVL 15 88 -383 * 310 115 197 0 chr10 4987889 4987950 -135328815 + LTR32 LTR ERVL 15 87 -384 240 160 60 0 chr10 4987925 4987975 -135328790 + LTR32 LTR ERVL 6 58 -413 * 291 111 0 0 chr10 4987972 4988017 -135328748 + LTR32 LTR ERVL 14 58 -413 288 120 60 0 chr10 4988009 4988059 -135328706 + LTR32 LTR ERVL 6 58 -413 * 657 219 26 7 chr10 4988097 4988248 -135328517 + LTR32 LTR ERVL 232 385 -86 2426 162 41 9 chr10 4989196 4989635 -135327130 - MER6 DNA MER2_type -411 454 2 695 252 59 50 chr10 4990121 4990462 -135326303 + L1MC4 LINE L1 7498 7841 -201 20641 58 9 6 chr10 4990590 4994100 -135322665 - L1PA5 LINE L1 -5 6149 2628 334 183 97 11 chr10 4994100 4994193 -135322572 + MSTB2 LTR MaLR 357 457 0 1420 188 23 31 chr10 4994392 4994615 -135322150 - MLT1A1 LTR MaLR -5 360 140 2236 154 56 5 chr10 4994615 4995024 -135321741 + MSTB1 LTR MaLR 1 430 -2 1420 188 23 31 chr10 4995024 4995152 -135321613 - MLT1A1 LTR MaLR -225 140 12 365 315 124 35 chr10 4995434 4995748 -135321017 + L2 LINE L2 2971 3312 -1 1693 136 23 28 chr10 4996936 4997493 -135319272 - LTR10E LTR ERV1 -21 612 8 5137 2 0 0 chr10 4997498 4998090 -135318675 - L1HS LINE L1 0 6155 5564 14121 48 3 2 chr10 4998190 5000059 -135316706 - L1P LINE L1 -1811 4335 2466 1663 62 0 37 chr10 5000057 5000301 -135316464 - L1P LINE L1 -5359 787 553 * 298 319 37 12 chr10 5000992 5001155 -135315610 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5001241 5001283 -135315482 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5001447 5001563 -135315202 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5001633 5001668 -135315097 + AT_rich Low_complexity Low_complexity 1 35 0 268 210 87 43 chr10 5001765 5001903 -135314862 + Charlie2 DNA MER1_type 2719 2862 0 276 323 0 83 chr10 5002339 5002472 -135314293 - MIR3 SINE MIR -84 124 3 1030 255 75 23 chr10 5002882 5003321 -135313444 + L1ME2 LINE L1 5690 6151 -13 567 231 33 86 chr10 5003883 5004176 -135312589 + L1MC4 LINE L1 6693 7002 -1008 383 222 93 25 chr10 5004196 5004358 -135312407 + L1MC5 LINE L1 7321 7493 -468 321 247 0 0 chr10 5004374 5004471 -135312294 + GA-rich Low_complexity Low_complexity 1 97 0 453 232 116 74 chr10 5004480 5004525 -135312240 + L1MC5 LINE L1 7474 7516 -445 1985 108 58 0 chr10 5004525 5004802 -135311963 + AluSg SINE Alu 1 293 -17 453 232 116 74 chr10 5004802 5005135 -135311630 + L1MC5 LINE L1 7516 7868 -93 5981 150 35 15 chr10 5005153 5006268 -135310497 + HSMAR2 DNA Mariner 2 1138 -164 348 209 29 0 chr10 5006430 5006535 -135310230 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5006549 5006605 -135310160 + AT_rich Low_complexity Low_complexity 1 56 0 241 333 26 0 chr10 5006872 5006986 -135309779 + MLT1L LTR MaLR 173 289 -326 247 173 0 19 chr10 5007167 5007219 -135309546 + MLT1L LTR MaLR 555 605 -10 32 43 0 0 chr10 5007395 5007441 -135309324 + AT_rich Low_complexity Low_complexity 1 46 0 637 281 117 40 chr10 5007647 5008244 -135308521 + L2 LINE L2 1819 2461 -853 393 308 119 13 chr10 5009034 5009193 -135307572 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5009432 5009581 -135307184 + (TG)n Simple_repeat Simple_repeat 2 150 0 10914 92 9 5 chr10 5011074 5012659 -135304106 + HERVFH19I LTR ERV1 3658 5249 -337 1218 164 9 0 chr10 5012658 5012872 -135303893 + HERVFH19I LTR ERV1 7503 7718 -1 * 1194 79 0 0 chr10 5012875 5013040 -135303725 + LTR19B LTR ERV1 3 167 -413 4331 257 21 7 chr10 5013041 5014139 -135302626 - LTR25-int LTR ERV1 -6223 2696 1584 655 222 160 31 chr10 5014128 5014358 -135302407 - LTR25-int LTR ERV1 -1704 4559 2493 * 7063 43 12 0 chr10 5014364 5015617 -135301148 - L1PA4 LINE L1 -5 6150 4886 3365 198 50 28 chr10 5015720 5016534 -135300231 - LTR25-int LTR ERV1 -6162 834 3 2091 177 68 48 chr10 5016543 5017109 -135299656 - LTR25 LTR ERV1 -4 788 251 349 198 0 25 chr10 5017228 5017309 -135299456 - LTR25 LTR ERV1 -501 293 215 330 148 0 148 chr10 5017289 5017377 -135299388 - MER61E LTR ERV1 -458 111 37 * 201 270 81 27 chr10 5018343 5018417 -135298348 + MIR SINE MIR 110 187 -75 555 165 0 0 chr10 5018922 5019007 -135297758 - AluJb SINE Alu -29 283 199 1068 90 0 0 chr10 5019009 5019142 -135297623 + AluSg/x SINE Alu 164 296 -16 696 241 0 0 chr10 5019149 5019282 -135297483 + FLAM_A SINE Alu 1 133 0 1986 147 0 10 chr10 5021011 5021303 -135295462 + AluJo SINE Alu 1 289 -23 2415 55 0 7 chr10 5021317 5021645 -135295120 + AluY SINE Alu 1 311 0 2061 185 19 56 chr10 5022533 5023068 -135293697 - MLT2B1 LTR ERVL 0 520 6 2342 81 10 0 chr10 5023070 5023366 -135293399 + AluSq SINE Alu 1 299 -14 516 271 0 0 chr10 5023378 5023548 -135293217 + (TG)n Simple_repeat Simple_repeat 2 171 0 490 167 83 19 chr10 5024385 5024493 -135292272 - MLT1C LTR MaLR -3 464 350 662 186 87 6 chr10 5024519 5024680 -135292085 - MER104 DNA Tc2 -6 174 1 278 280 200 0 chr10 5025391 5025516 -135291249 - MLT1I LTR MaLR -11 398 249 333 211 0 0 chr10 5025575 5025651 -135291114 + L1 LINE L1 4290 4365 -1781 1313 109 104 0 chr10 5025656 5025877 -135290888 - L1M2 LINE L1 -495 5805 5562 1815 189 35 10 chr10 5026358 5026759 -135290006 + MSTB LTR MaLR 1 411 -15 2383 35 0 18 chr10 5026913 5027226 -135289539 + AluY SINE Alu 1 308 0 180 189 75 38 chr10 5027227 5027280 -135289485 + L2 LINE L2 3255 3309 -4 383 290 138 41 chr10 5028406 5028696 -135288069 - L2 LINE L2 -1 3312 2995 1336 210 14 31 chr10 5029001 5029129 -135287636 + MLT1A1 LTR MaLR 12 141 -224 2241 163 48 5 chr10 5029129 5029541 -135287224 - MSTB1 LTR MaLR -2 430 1 1336 210 14 31 chr10 5029541 5029765 -135287000 + MLT1A1 LTR MaLR 141 358 -7 1699 220 20 18 chr10 5029967 5030362 -135286403 - MSTD LTR MaLR 0 396 1 341 324 103 29 chr10 5031041 5031353 -135285412 + L3 LINE CR1 629 963 -614 1982 37 0 12 chr10 5031623 5031864 -135284901 + AluY SINE Alu 74 311 0 6224 93 27 0 chr10 5032158 5033141 -135283624 - L1PA12 LINE L1 0 6168 5174 198 268 18 0 chr10 5033689 5033745 -135283020 - MIR SINE MIR -52 210 154 22 0 0 0 chr10 5033758 5033780 -135282985 + AT_rich Low_complexity Low_complexity 1 22 0 1905 124 14 40 chr10 5034696 5035050 -135281715 - Tigger2 DNA MER2_type -101 2617 2273 430 171 0 0 chr10 5035039 5035109 -135281656 + MER8 DNA MER2_type 170 239 0 * 263 27 0 27 chr10 5035114 5035151 -135281614 + (TG)n Simple_repeat Simple_repeat 1 36 0 2912 21 0 3 chr10 5035405 5035781 -135280984 - L1P LINE L1 -788 5358 4984 * 9006 30 4 0 chr10 5035779 5036902 -135279863 + L1P LINE L1 3833 4959 -1187 574 294 48 22 chr10 5036904 5037173 -135279592 - HERVL-B3 LTR ERVL -5378 276 1 284 151 50 8 chr10 5037211 5037330 -135279435 + (TA)n Simple_repeat Simple_repeat 2 125 0 1100 268 20 49 chr10 5037387 5037953 -135278812 - MLT2B3 LTR ERVL -50 504 1 8865 187 46 30 chr10 5037993 5040052 -135276713 + Tigger1 DNA MER2_type 4 2095 -323 9541 48 12 0 chr10 5040155 5042057 -135274708 - L1PA6 LINE L1 -151 6003 4076 5160 98 108 33 chr10 5042057 5043145 -135273620 + MER11A LTR ERVK 1 1266 0 2910 55 57 2 chr10 5043145 5043564 -135273201 - L1PA6 LINE L1 -2065 4081 3640 411 141 0 0 chr10 5043563 5043627 -135273138 - L1P LINE L1 -6072 74 11 * 896 239 38 4 chr10 5043642 5043905 -135272860 + Tigger1 DNA MER2_type 2147 2418 0 354 282 37 29 chr10 5043919 5044164 -135272601 - L1M4 LINE L1 -3758 2388 2142 426 167 1 0 chr10 5044171 5044264 -135272501 + L1P5 LINE L1 5416 5509 -647 256 237 66 13 chr10 5044268 5044292 -135272473 - U8 snRNA snRNA -42 94 73 1586 195 4 0 chr10 5044292 5044549 -135272216 - AluSq SINE Alu -55 258 1 256 237 66 13 chr10 5044549 5044600 -135272165 - U8 snRNA snRNA -63 73 15 544 33 55 0 chr10 5045215 5045306 -135271459 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 793 308 27 6 chr10 5047069 5047403 -135269362 + MER68 LTR ERV1 108 448 -114 1340 199 17 52 chr10 5047430 5047717 -135269048 + AluJb SINE Alu 9 285 -27 772 207 38 42 chr10 5048476 5048713 -135268052 - L1PB2 LINE L1 0 6151 5916 11413 209 50 16 chr10 5048854 5053277 -135263488 - L1PB2 LINE L1 -163 6045 1432 2147 114 9 19 chr10 5053277 5053592 -135263173 - AluSx SINE Alu 0 312 1 11413 209 50 16 chr10 5053592 5054144 -135262621 - L1PB2 LINE L1 -4776 1432 900 4599 199 41 33 chr10 5054278 5055858 -135260907 - L1PB2 LINE L1 -5219 985 2 352 241 35 41 chr10 5056367 5056512 -135260253 - L1MC4 LINE L1 -622 7420 7277 22 80 0 0 chr10 5056619 5056669 -135260096 + AT_rich Low_complexity Low_complexity 1 50 0 318 348 36 5 chr10 5056923 5057144 -135259621 - L1MC4 LINE L1 -980 7062 6835 421 198 69 10 chr10 5057600 5057701 -135259064 - MER5A DNA MER1_type -75 114 8 195 379 131 0 chr10 5058129 5058282 -135258483 + MIR3 SINE MIR 3 175 -33 287 284 90 19 chr10 5058437 5058592 -135258173 + MER92B LTR ERV1 374 539 -97 240 281 141 20 chr10 5058820 5059019 -135257746 - Charlie2 DNA MER1_type -2609 253 31 333 208 73 0 chr10 5059544 5059640 -135257125 - ORSL DNA AcHobo -172 103 1 3106 108 82 4 chr10 5060829 5061303 -135255462 - MER9 LTR ERVK 0 511 1 288 270 93 28 chr10 5061682 5061930 -135254835 - L1ME4a LINE L1 -50 6071 5808 255 317 84 42 chr10 5062024 5062166 -135254599 - L2 LINE L2 0 3313 3166 639 291 9 36 chr10 5062206 5062426 -135254339 + LTR40a LTR ERVL 1 214 -305 603 181 9 0 chr10 5062427 5062532 -135254233 - LTR49 LTR ERV1 0 595 490 2152 150 53 3 chr10 5062535 5062895 -135253870 + MER39B LTR ERV1 6 383 -270 1309 232 27 55 chr10 5062898 5063265 -135253500 + MSTB1-int LTR MaLR 1295 1651 0 2064 188 53 14 chr10 5063265 5063681 -135253084 + MSTB1 LTR MaLR 1 432 0 2128 131 25 0 chr10 5064081 5064401 -135252364 - MER75 DNA T2_type 0 514 187 2058 70 11 22 chr10 5064403 5064674 -135252091 + HERVL-A1 LTR ERVL 3645 3912 -1742 * 6984 93 43 6 chr10 5064667 5065651 -135251114 + HERVL-A1 LTR ERVL 4635 5654 0 3201 99 47 0 chr10 5065651 5066038 -135250727 + MLT2A1 LTR ERVL 1 411 -33 195 69 0 0 chr10 5066038 5066067 -135250698 + (TA)n Simple_repeat Simple_repeat 2 30 0 3201 99 47 0 chr10 5066067 5066103 -135250662 + MLT2A1 LTR ERVL 411 444 0 1820 196 15 15 chr10 5066103 5066495 -135250270 + Tigger1 DNA MER2_type 1560 1951 -467 297 276 11 11 chr10 5066498 5066585 -135250180 + Tigger3(Golem) DNA MER2_type 2942 3028 -1 631 264 66 46 chr10 5066587 5066624 -135250141 - L1M4c LINE L1 -4007 2377 2342 1479 170 120 0 chr10 5066624 5066900 -135249865 - AluSx SINE Alu -3 309 1 631 264 66 46 chr10 5066900 5067427 -135249338 - L1M4c LINE L1 -4042 2342 1713 570 325 96 17 chr10 5067799 5068091 -135248674 - L2 LINE L2 -890 2424 2110 3055 174 78 41 chr10 5069206 5069889 -135246876 + pTR5 LTR ERV1 741 1448 -990 8216 184 102 69 chr10 5070026 5071228 -135245537 - MER51B-int LTR ERV1 0 7816 6655 234 0 0 0 chr10 5071228 5071254 -135245511 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8216 184 102 69 chr10 5071254 5072705 -135244060 - MER51B-int LTR ERV1 -1161 6655 4954 856 172 93 54 chr10 5072687 5072891 -135243874 - MER51B-int LTR ERV1 -3244 1973 1762 * 877 143 27 0 chr10 5072893 5073040 -135243725 + GSAT Satellite centromeric 40 190 -27 1498 129 19 23 chr10 5073043 5073307 -135243458 - MER51B-int LTR ERV1 -2852 3094 2832 * 2049 134 64 0 chr10 5073303 5073631 -135243134 - MER51B-int LTR ERV1 -4504 3312 2964 879 108 7 7 chr10 5073639 5073787 -135242978 - MER51B-int LTR ERV1 -5676 2140 1993 2059 151 3 0 chr10 5073787 5074086 -135242679 + AluSq SINE Alu 1 300 -13 1976 166 92 26 chr10 5074092 5074471 -135242294 - MER51B-int LTR ERV1 -7412 404 1 2693 130 19 0 chr10 5074471 5074841 -135241924 - MER51B LTR ERV1 0 377 1 1103 256 19 4 chr10 5074841 5075107 -135241658 + MLT1A1 LTR MaLR 96 365 0 679 335 0 0 chr10 5075304 5075501 -135241264 - MSTD LTR MaLR 0 396 200 2299 221 32 15 chr10 5075699 5076232 -135240533 + MER67A LTR ERV1 1 542 -1 1768 215 80 67 chr10 5076566 5077152 -135239613 + MER67C LTR ERV1 28 621 -89 1531 143 0 0 chr10 5077282 5077505 -135239260 - AluSg SINE Alu -87 223 1 332 180 60 20 chr10 5077506 5077606 -135239159 + MER67C LTR ERV1 607 710 0 425 224 26 26 chr10 5077989 5078105 -135238660 + MER31B LTR ERV1 245 360 -106 613 121 10 20 chr10 5078132 5078231 -135238534 + MER4A LTR ERV1 1 98 -566 1830 151 3 22 chr10 5078231 5078583 -135238182 + MER4A LTR ERV1 261 664 0 1398 184 23 0 chr10 5078583 5078842 -135237923 + LTR49 LTR ERV1 23 287 -308 912 194 155 52 chr10 5078843 5079153 -135237612 + MER4A LTR ERV1 1 342 -322 518 139 285 7 chr10 5079209 5079346 -135237419 + MER4C LTR ERV1 291 465 0 547 152 132 111 chr10 5079346 5079605 -135237160 + LTR49 LTR ERV1 285 594 -1 2280 105 3 0 chr10 5079836 5080130 -135236635 + AluSp SINE Alu 1 295 -18 874 186 34 0 chr10 5080451 5080628 -135236137 + MSTD LTR MaLR 1 183 -213 201 39 0 0 chr10 5080640 5080666 -135236099 + (TC)n Simple_repeat Simple_repeat 1 26 0 509 169 11 0 chr10 5080668 5080757 -135236008 + MSTD LTR MaLR 339 428 0 2983 133 11 77 chr10 5081954 5082385 -135234380 - MER75 DNA T2_type -1 513 124 1807 131 0 69 chr10 5082385 5082691 -135234074 + AluSx SINE Alu 1 285 -27 2983 133 11 77 chr10 5082691 5082808 -135233957 - MER75 DNA T2_type -390 124 1 802 202 71 158 chr10 5083540 5084185 -135232580 + LTR49 LTR ERV1 7 595 0 1834 166 0 11 chr10 5084779 5085091 -135231674 + AluSx SINE Alu 1 309 0 1033 292 58 18 chr10 5085228 5085622 -135231143 - LTR26 LTR ERV1 -3 600 191 3481 240 11 33 chr10 5086577 5087512 -135229253 - L1 LINE L1 -1847 4299 3386 5405 37 0 6 chr10 5087512 5088136 -135228629 - L1PA4 LINE L1 -1 6154 5535 4032 139 5 5 chr10 5088237 5088863 -135227902 + MER50-int LTR ERV1 5402 6027 -1178 1844 162 10 0 chr10 5088862 5089159 -135227606 + MER50-int LTR ERV1 6882 7181 -24 * 1076 160 52 16 chr10 5089160 5089354 -135227411 + MER50 LTR ERV1 1 201 -533 552 103 103 0 chr10 5089391 5089488 -135227277 - L1PA15 LINE L1 -6 6159 6053 2218 212 35 8 chr10 5089496 5089981 -135226784 - L1P LINE L1 -1239 4907 4410 336 270 0 0 chr10 5090013 5090161 -135226604 + (CA)n Simple_repeat Simple_repeat 1 148 0 298 157 20 0 chr10 5091130 5091181 -135225584 + LTR29 LTR ERV1 571 622 0 189 74 0 0 chr10 5091581 5091608 -135225157 + (TAA)n Simple_repeat Simple_repeat 1 27 0 682 258 19 24 chr10 5092918 5093152 -135223613 + MLT1E LTR MaLR 252 495 -98 1008 106 0 35 chr10 5093351 5093492 -135223273 + AluSq/x SINE Alu 2 137 -176 1081 281 81 17 chr10 5093965 5094432 -135222333 + LTR26 LTR ERV1 104 600 -3 744 199 89 171 chr10 5094935 5095583 -135221182 - LTR49 LTR ERV1 0 595 1 1168 228 35 27 chr10 5097348 5097607 -135219158 + AluJo SINE Alu 3 263 -49 1954 184 11 3 chr10 5097613 5097961 -135218804 - LTR49 LTR ERV1 -242 353 3 420 214 19 10 chr10 5097964 5098067 -135218698 - MER31B LTR ERV1 -106 360 257 2104 152 129 28 chr10 5098103 5098491 -135218274 + MSTA LTR MaLR 2 428 0 7328 246 43 18 chr10 5098493 5100031 -135216734 + MSTA-int LTR MaLR 3 1579 -1 2106 127 132 43 chr10 5100032 5100425 -135216340 + MSTA LTR MaLR 1 428 0 434 230 34 40 chr10 5100811 5100959 -135215806 - MER67C LTR ERV1 -3 707 561 3897 286 15 1 chr10 5100962 5101880 -135214885 + PABL_B-int LTR ERV1 3754 4684 -2438 343 153 17 0 chr10 5101885 5101944 -135214821 + MER4A LTR ERV1 605 664 0 2111 212 28 37 chr10 5101944 5102487 -135214278 + L1MB3 LINE L1 5646 6183 0 395 203 70 44 chr10 5102763 5102921 -135213844 - LTR49-int LTR ERV1 -5211 1120 959 779 326 25 0 chr10 5103098 5103340 -135213425 - L1PA15-16 LINE L1 -5339 1510 1263 324 317 10 0 chr10 5103696 5103797 -135212968 - L1M2 LINE L1 -5793 1056 955 1072 286 106 24 chr10 5103857 5104318 -135212447 - L2 LINE L2 -1227 2087 1589 668 223 0 0 chr10 5104320 5104459 -135212306 - MLT1D LTR MaLR -3 502 364 247 296 0 0 chr10 5104455 5104509 -135212256 + Tigger3(Golem) DNA MER2_type 2975 3028 -1 * 2512 270 51 26 chr10 5104512 5105935 -135210830 - L1M4c LINE L1 -4026 2358 806 542 237 0 23 chr10 5106466 5106597 -135210168 - U8 snRNA snRNA -4 132 5 387 277 84 47 chr10 5108965 5109247 -135207518 + MER68 LTR ERV1 238 599 -6 228 312 136 0 chr10 5111995 5112149 -135204616 - L2 LINE L2 -1357 1957 1783 2336 86 0 13 chr10 5113067 5113369 -135203396 + AluSp SINE Alu 1 298 -15 994 241 108 49 chr10 5113411 5113939 -135202826 - LTR49-int LTR ERV1 -2464 2472 1914 883 144 7 7 chr10 5114431 5114584 -135202181 - L1PA13 LINE L1 -7 6156 6004 711 302 60 0 chr10 5114585 5114850 -135201915 - L2 LINE L2 -1436 1878 1598 1500 253 26 17 chr10 5114857 5115323 -135201442 - MLT1D LTR MaLR 0 505 36 196 290 16 16 chr10 5116123 5116185 -135200580 - MER5B DNA MER1_type -68 110 49 666 203 120 0 chr10 5116194 5116352 -135200413 - L1PB4 LINE L1 0 6156 5980 386 165 13 25 chr10 5116350 5116429 -135200336 - L1PA15-16 LINE L1 -5570 1279 1202 * 524 258 19 80 chr10 5116443 5116804 -135199961 - L1 LINE L1 -826 5320 4982 3648 181 74 15 chr10 5117298 5118078 -135198687 - LTR1B LTR ERV1 0 826 1 223 208 0 38 chr10 5118982 5119035 -135197730 + CT-rich Low_complexity Low_complexity 2 52 0 2671 264 10 8 chr10 5119280 5120002 -135196763 + MST-int LTR MaLR 910 1632 -19 535 264 39 10 chr10 5120079 5120287 -135196478 - L1M4c LINE L1 -4143 2241 2028 2200 247 40 49 chr10 5120378 5120565 -135196200 - L1M4c LINE L1 -4564 1820 1633 2003 122 21 0 chr10 5120565 5120851 -135195914 + AluSc SINE Alu 1 292 -17 2200 247 40 49 chr10 5120851 5121016 -135195749 - L1M4c LINE L1 -4751 1633 1468 1675 147 30 4 chr10 5121016 5121281 -135195484 - AluSx SINE Alu -5 307 36 2200 247 40 49 chr10 5121281 5121943 -135194822 - L1M4c LINE L1 -4916 1468 813 2025 123 3 10 chr10 5121943 5122236 -135194529 - AluSc SINE Alu -18 291 1 2200 247 40 49 chr10 5122236 5122273 -135194492 - L1M4c LINE L1 -5571 813 777 225 265 68 34 chr10 5122353 5122470 -135194295 - L1M4c LINE L1 -5714 670 550 416 258 38 30 chr10 5122796 5122928 -135193837 - U8 snRNA snRNA -3 133 1 23 33 0 0 chr10 5123285 5123315 -135193450 + AT_rich Low_complexity Low_complexity 1 30 0 966 303 94 16 chr10 5125207 5125719 -135191046 + MER68 LTR ERV1 1 552 -10 204 290 153 17 chr10 5128464 5128640 -135188125 - L2 LINE L2 -1317 1997 1798 236 261 11 0 chr10 5130021 5130113 -135186652 + (CA)n Simple_repeat Simple_repeat 1 93 0 379 319 127 0 chr10 5130392 5130549 -135186216 + MIR3 SINE MIR 26 202 -6 601 263 110 32 chr10 5131335 5131773 -135184992 - L2 LINE L2 -853 2461 1990 321 264 58 50 chr10 5131783 5131904 -135184861 - L1MC5 LINE L1 -518 7443 7322 601 261 39 32 chr10 5131934 5132214 -135184551 - L1MC4 LINE L1 -999 7043 6762 846 268 68 11 chr10 5132834 5133215 -135183550 - L1ME2 LINE L1 -66 6098 5696 246 321 27 54 chr10 5133663 5133775 -135182990 + MIR SINE MIR 20 128 -80 251 232 71 19 chr10 5134201 5134356 -135182409 - Charlie2 DNA MER1_type -4 2858 2696 297 127 38 13 chr10 5134548 5134627 -135182138 + (TAGA)n Simple_repeat Simple_repeat 1 81 0 330 316 83 18 chr10 5134791 5135069 -135181696 - MER92B LTR ERV1 -91 545 250 414 240 91 39 chr10 5135746 5136000 -135180765 - ORSL DNA AcHobo 0 275 9 1951 117 163 14 chr10 5137306 5137675 -135179090 + MSTA LTR MaLR 1 424 -4 334 274 63 84 chr10 5137905 5138095 -135178670 - L2 LINE L2 0 3313 3128 420 320 31 16 chr10 5138095 5138289 -135178476 + LTR40a LTR ERVL 1 197 -322 453 204 19 0 chr10 5138308 5138408 -135178357 - LTR49 LTR ERV1 -2 593 492 838 120 84 0 chr10 5138408 5138550 -135178215 + MER39B LTR ERV1 1 154 -499 941 184 22 0 chr10 5138564 5138749 -135178016 - LTR49-int LTR ERV1 -327 6004 5816 288 239 114 0 chr10 5138761 5138849 -135177916 - LTR49-int LTR ERV1 -189 6142 6045 2339 151 73 14 chr10 5138859 5139296 -135177469 + HUERS-P1 LTR ERV1 5794 6256 -7 2344 114 0 0 chr10 5139296 5139595 -135177170 + AluSx SINE Alu 1 299 -13 3920 138 15 58 chr10 5139610 5140332 -135176433 + LTR8 LTR ERV1 1 691 0 6670 186 53 22 chr10 5140332 5142076 -135174689 + HUERS-P1 LTR ERV1 3959 5756 -575 207 136 0 45 chr10 5142192 5142236 -135174529 + (TTTC)n Simple_repeat Simple_repeat 1 42 0 641 208 26 53 chr10 5142316 5142788 -135173977 + MER4C LTR ERV1 4 465 0 239 247 21 32 chr10 5142850 5142943 -135173822 + CT-rich Low_complexity Low_complexity 5 96 0 2089 253 20 42 chr10 5143185 5143782 -135172983 + MSTB1-int LTR MaLR 976 1559 -92 1785 208 45 14 chr10 5143795 5144214 -135172551 + MSTB1 LTR MaLR 1 432 0 624 250 0 0 chr10 5144324 5144484 -135172281 + L1P LINE L1 5059 5218 -928 277 356 40 7 chr10 5144494 5144643 -135172122 - ERVL LTR ERVL -5375 279 126 * 339 301 68 0 chr10 5144634 5144780 -135171985 - ERVL LTR ERVL -5306 458 303 27344 26 1 0 chr10 5144792 5148980 -135167785 - L1PA3 LINE L1 0 6155 1967 1141 289 61 7 chr10 5149579 5150004 -135166761 + MER68 LTR ERV1 1 448 -114 1352 179 21 69 chr10 5150031 5150322 -135166443 + AluJb SINE Alu 9 285 -27 240 303 0 0 chr10 5150336 5150402 -135166363 + MER68 LTR ERV1 491 556 -6 3873 124 56 73 chr10 5150625 5151423 -135165342 + LTR1 LTR ERV1 1 785 0 1742 179 22 11 chr10 5151908 5152272 -135164493 - L1PB2 LINE L1 -2 6865 6498 5655 182 79 10 chr10 5152375 5154287 -135162478 - L1PB2 LINE L1 -414 6453 4404 405 0 0 0 chr10 5154287 5154332 -135162433 + (TG)n Simple_repeat Simple_repeat 2 46 0 802 194 16 0 chr10 5154635 5154698 -135162067 - L1PB2 LINE L1 -2399 4463 4402 360 0 0 0 chr10 5154698 5154738 -135162027 + (TG)n Simple_repeat Simple_repeat 2 41 0 802 194 16 0 chr10 5154738 5154860 -135161905 - L1PB2 LINE L1 -2460 4402 4275 1705 262 26 37 chr10 5154871 5155523 -135161242 - L1PB2 LINE L1 -6216 647 3 261 304 22 29 chr10 5157665 5157803 -135158962 - L2 LINE L2 -1388 1926 1790 353 171 0 26 chr10 5160409 5160485 -135156280 - L1MC5 LINE L1 -285 7676 7603 386 242 114 72 chr10 5160789 5161053 -135155712 - L1MC4 LINE L1 -558 7484 7210 23 0 0 0 chr10 5161151 5161174 -135155591 + AT_rich Low_complexity Low_complexity 1 23 0 1985 130 103 30 chr10 5161280 5161619 -135155146 - THE1B LTR MaLR 0 364 1 5639 96 20 50 chr10 5161621 5162362 -135154403 - THE1B-int LTR MaLR -2 1578 864 2357 86 0 20 chr10 5162362 5162665 -135154100 - AluSg SINE Alu -13 297 1 5639 96 20 50 chr10 5162665 5162769 -135153996 - THE1B-int LTR MaLR -716 864 758 344 230 80 102 chr10 5162991 5163352 -135153413 - L1MC4 LINE L1 0 8042 7690 21 36 0 0 chr10 5163536 5163564 -135153201 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 5163825 5163851 -135152914 + AT_rich Low_complexity Low_complexity 1 26 0 262 361 0 0 chr10 5163883 5164002 -135152763 - L1MC4 LINE L1 -1036 7006 6888 269 194 45 0 chr10 5164541 5164608 -135152157 - MER5A DNA MER1_type -113 76 7 278 176 0 0 chr10 5165160 5165211 -135151554 - AluSq SINE Alu -2 306 256 1306 133 15 5 chr10 5165212 5165407 -135151358 - AluSq SINE Alu -116 197 1 982 282 111 24 chr10 5165629 5166080 -135150685 - MLT1H LTR MaLR -17 532 43 204 177 38 25 chr10 5166142 5166221 -135150544 + (TA)n Simple_repeat Simple_repeat 2 81 0 241 264 109 29 chr10 5166849 5167023 -135149742 - L1M4 LINE L1 -1544 4602 4415 247 308 75 0 chr10 5167208 5167328 -135149437 - L1MC4 LINE L1 -985 7057 6929 2258 105 0 10 chr10 5168688 5168984 -135147781 + AluSx SINE Alu 1 293 -19 3795 123 53 10 chr10 5169396 5169998 -135146767 - THE1B-int LTR MaLR -938 642 15 2187 128 51 26 chr10 5170000 5170351 -135146414 - THE1B LTR MaLR -2 362 3 409 299 72 14 chr10 5170407 5170628 -135146137 - L1MC4 LINE L1 -977 7065 6832 358 234 84 0 chr10 5171057 5171164 -135145601 - MER5A DNA MER1_type -73 116 1 186 229 12 108 chr10 5171647 5171730 -135145035 + MIR3 SINE MIR 95 169 -39 284 263 103 39 chr10 5171907 5172063 -135144702 - MLT1H LTR MaLR -27 522 357 315 256 39 45 chr10 5172078 5172234 -135144531 - L1M4 LINE L1 -877 5269 5115 2127 225 20 4 chr10 5172789 5173247 -135143518 - MSTB-int LTR MaLR -1186 465 1 1794 227 65 8 chr10 5173249 5173650 -135143115 - MSTB LTR MaLR -2 424 1 1916 158 0 3 chr10 5174764 5175061 -135141704 + AluSx SINE Alu 1 296 -16 643 338 61 7 chr10 5177443 5177739 -135139026 + L2 LINE L2 2113 2424 -890 25 51 0 0 chr10 5177876 5177915 -135138850 + AT_rich Low_complexity Low_complexity 1 39 0 2339 91 0 0 chr10 5177990 5178288 -135138477 + AluY SINE Alu 1 298 -13 2020 145 0 20 chr10 5178409 5178712 -135138053 + AluSx SINE Alu 10 306 -6 765 242 36 12 chr10 5179028 5179276 -135137489 + L1M4c LINE L1 2125 2378 -4006 465 275 51 29 chr10 5179276 5179414 -135137351 - MER7A DNA MER2_type 0 336 196 2084 113 28 0 chr10 5179421 5179705 -135137060 + AluSx SINE Alu 1 292 -20 861 81 0 65 chr10 5179727 5179851 -135136914 - AluSc SINE Alu -140 169 54 44945 40 1 4 chr10 5179966 5186138 -135130627 + L1PA3 LINE L1 2 6153 -2 956 225 16 0 chr10 5186166 5186357 -135130408 - MER7A DNA MER2_type -143 203 12 521 253 70 19 chr10 5186760 5186918 -135129847 - Tigger1 DNA MER2_type -1 2417 2252 8968 174 48 23 chr10 5187051 5188310 -135128455 - Tigger1 DNA MER2_type -573 1845 525 2262 92 7 0 chr10 5188310 5188592 -135128173 + AluSg SINE Alu 2 285 -25 8968 174 48 23 chr10 5188592 5189130 -135127635 - Tigger1 DNA MER2_type -1893 525 2 2064 233 27 33 chr10 5189168 5189679 -135127086 + MLT2B3 LTR ERVL 1 508 -46 231 125 0 0 chr10 5189679 5189719 -135127046 + (CA)n Simple_repeat Simple_repeat 1 40 0 1080 209 50 56 chr10 5189754 5190112 -135126653 + HERVL-B3 LTR ERVL 1 356 -5298 256 200 0 0 chr10 5190150 5190200 -135126565 + HERVL-B3 LTR ERVL 394 443 -5042 423 218 29 35 chr10 5190214 5190384 -135126381 + L1ME1 LINE L1 5106 5274 -872 29379 116 32 63 chr10 5191554 5195020 -135121745 + L1PA7 LINE L1 12 3167 -2987 210 37 0 0 chr10 5195020 5195047 -135121718 + (CA)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5195047 5197928 -135118837 + L1PA7 LINE L1 3167 6138 -16 7757 121 50 1 chr10 5197928 5199090 -135117675 + HSMAR1 DNA Mariner 13 1231 -56 217 351 40 35 chr10 5199154 5199356 -135117409 - L2 LINE L2 -140 3173 2971 665 238 37 56 chr10 5199633 5199847 -135116918 + L1MDa LINE L1 87 296 -6244 1747 257 43 19 chr10 5199887 5200417 -135116348 + L1ME1 LINE L1 5525 6067 -99 2583 216 35 24 chr10 5200417 5201042 -135115723 - LTR48B LTR ERV1 0 644 13 372 245 21 21 chr10 5201078 5201172 -135115593 + L1ME1 LINE L1 6068 6161 -5 1935 195 46 2 chr10 5201859 5202253 -135114512 + MSTB LTR MaLR 1 411 -15 13210 51 76 4 chr10 5202402 5204121 -135112644 + L1P LINE L1 2 1844 -4302 1443 204 25 0 chr10 5204619 5204893 -135111872 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5205606 5205694 -135111071 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5205697 5205731 -135111034 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5205731 5206018 -135110747 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5206631 5206739 -135110026 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5208024 5208172 -135108593 - MIR3 SINE MIR -31 177 35 1915 127 7 19 chr10 5208618 5208926 -135107839 - THE1B LTR MaLR 0 364 61 214 324 0 14 chr10 5408955 5409026 -134907739 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5409126 5409432 -134907333 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5411718 5411854 -134904911 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5411886 5411940 -134904825 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5412164 5412259 -134904506 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5412434 5412458 -134904307 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5413017 5413213 -134903552 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5414112 5414170 -134902595 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5415038 5415097 -134901668 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5415251 5415278 -134901487 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5415331 5415480 -134901285 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5415510 5415564 -134901201 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5416863 5416983 -134899782 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5417178 5417242 -134899523 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5417323 5417483 -134899282 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5417653 5417675 -134899090 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5420540 5420571 -134896194 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5420969 5420990 -134895775 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5422022 5422327 -134894438 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5422671 5424224 -134892541 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5424414 5425134 -134891631 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5426967 5427019 -134889746 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5427689 5427859 -134888906 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5427904 5428294 -134888471 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5428299 5428407 -134888358 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5428878 5428951 -134887814 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5429933 5430230 -134886535 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5433825 5434043 -134882722 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5434347 5434374 -134882391 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5434663 5435585 -134881180 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5435947 5436507 -134880258 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5436918 5437022 -134879743 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5439580 5439678 -134877087 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5439678 5439770 -134876995 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5440067 5440197 -134876568 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5440304 5440547 -134876218 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5440619 5440742 -134876023 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5440957 5441010 -134875755 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5441385 5441657 -134875108 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5442255 5442305 -134874460 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5442312 5442380 -134874385 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5442537 5442594 -134874171 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5442595 5442775 -134873990 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5442784 5442832 -134873933 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5442885 5442922 -134873843 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5442922 5443102 -134873663 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5443102 5443439 -134873326 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5443655 5443826 -134872939 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5444123 5444264 -134872501 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5444291 5444607 -134872158 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5444818 5444912 -134871853 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5444912 5444947 -134871818 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5446231 5446414 -134870351 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5447159 5447181 -134869584 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5448595 5449086 -134867679 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5449175 5449207 -134867558 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5449208 5449485 -134867280 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5449494 5449778 -134866987 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5449778 5450027 -134866738 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5450027 5452100 -134864665 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5452100 5452615 -134864150 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5452615 5452859 -134863906 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5452863 5453118 -134863647 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5453118 5453409 -134863356 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5453409 5453428 -134863337 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5453428 5453727 -134863038 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5453727 5453942 -134862823 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5453936 5454035 -134862730 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5454036 5454340 -134862425 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5454487 5454719 -134862046 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5455731 5456382 -134860383 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5456675 5456903 -134859862 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5456903 5457194 -134859571 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5457194 5457357 -134859408 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5457449 5457825 -134858940 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5457868 5458076 -134858689 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5458076 5458388 -134858377 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5458388 5458566 -134858199 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5458666 5458955 -134857810 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5459191 5459318 -134857447 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5461370 5461462 -134855303 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5461987 5462063 -134854702 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5462063 5462475 -134854290 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5462475 5462834 -134853931 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5462967 5463048 -134853717 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5463168 5463269 -134853496 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5463540 5463897 -134852868 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5464442 5464552 -134852213 + MER5A DNA MER1_type 74 187 -2 419 177 0 0 chr10 5465854 5465933 -134850832 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5466444 5466753 -134850012 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5467660 5467828 -134848937 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5467828 5468138 -134848627 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5468138 5468351 -134848414 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5468361 5468580 -134848185 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5468712 5469043 -134847722 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5469053 5469213 -134847552 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5469234 5469441 -134847324 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5471159 5471206 -134845559 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5471385 5471541 -134845224 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5472011 5473049 -134843716 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5473270 5473435 -134843330 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5474242 5474633 -134842132 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5474636 5474953 -134841812 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5478122 5478332 -134838433 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5478405 5478527 -134838238 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5478686 5479101 -134837664 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5479492 5479665 -134837100 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5479816 5479872 -134836893 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5480000 5480301 -134836464 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5480363 5480621 -134836144 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5481268 5481581 -134835184 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5481583 5481892 -134834873 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5482062 5482374 -134834391 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5482429 5482613 -134834152 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5482613 5482909 -134833856 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5482909 5483024 -134833741 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5483037 5483178 -134833587 + AluSq/x SINE Alu 1 142 -170 1614 135 8 4 chr10 5483312 5483557 -134833208 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5483726 5484068 -134832697 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5484344 5484365 -134832400 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5484662 5485058 -134831707 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5485131 5485224 -134831541 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5485251 5485454 -134831311 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5485565 5486088 -134830677 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5489563 5489596 -134827169 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5490416 5490447 -134826318 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5490882 5490913 -134825852 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5491278 5491299 -134825466 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5493220 5493331 -134823434 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5494796 5494893 -134821872 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5494906 5495223 -134821542 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5496052 5496218 -134820547 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5497577 5497696 -134819069 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5497988 5498285 -134818480 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5499866 5499941 -134816824 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5499941 5500206 -134816559 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5500206 5500344 -134816421 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5500378 5500543 -134816222 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5500838 5500885 -134815880 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5500885 5501238 -134815527 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5501238 5501583 -134815182 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5501589 5501660 -134815105 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5502184 5502481 -134814284 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5502538 5502717 -134814048 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5503576 5503619 -134813146 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5503700 5503724 -134813041 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5504391 5505010 -134811755 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5505010 5505325 -134811440 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 5505325 5505622 -134811143 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5505624 5505692 -134811073 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5505702 5505883 -134810882 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5506294 5506411 -134810354 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5506610 5506760 -134810005 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5506770 5506920 -134809845 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5507438 5507643 -134809122 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5507643 5507944 -134808821 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5507944 5508231 -134808534 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5508275 5508451 -134808314 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5508884 5509055 -134807710 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5509060 5509376 -134807389 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5509376 5509423 -134807342 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5509423 5509737 -134807028 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5509737 5510040 -134806725 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5510040 5510372 -134806393 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5510554 5510718 -134806047 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5510820 5510929 -134805836 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5511026 5511338 -134805427 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5511857 5511985 -134804780 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5512152 5512220 -134804545 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5512492 5512603 -134804162 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5513459 5513537 -134803228 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5513559 5513796 -134802969 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5513796 5514061 -134802704 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5514061 5514600 -134802165 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5514767 5514951 -134801814 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5515010 5515150 -134801615 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5515150 5515450 -134801315 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5516802 5517021 -134799744 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5517049 5517388 -134799377 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5518136 5518497 -134798268 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5520855 5520923 -134795842 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5521743 5521877 -134794888 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5522148 5522226 -134794539 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5523313 5523343 -134793422 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5524691 5524960 -134791805 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5526983 5527005 -134789760 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5528268 5528366 -134788399 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5528917 5528944 -134787821 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5531991 5532246 -134784519 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5532246 5532610 -134784155 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5532610 5532977 -134783788 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5532977 5533080 -134783685 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5533168 5533379 -134783386 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5533473 5533538 -134783227 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5533538 5533834 -134782931 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5533834 5534117 -134782648 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5534155 5534544 -134782221 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5534861 5534971 -134781794 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5534877 5535008 -134781757 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5536148 5536332 -134780433 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5537070 5537135 -134779630 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5538636 5538778 -134777987 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5540068 5540174 -134776591 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5540854 5540975 -134775790 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5541905 5542089 -134774676 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5546075 5547052 -134769713 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5547227 5547501 -134769264 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5547501 5548054 -134768711 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5548054 5548273 -134768492 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5549488 5549654 -134767111 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5549546 5549725 -134767040 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5550390 5550558 -134766207 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5550695 5551399 -134765366 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5551399 5551695 -134765070 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5551695 5551926 -134764839 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5552219 5552335 -134764430 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5553972 5554105 -134762660 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5555561 5555597 -134761168 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1990 126 7 10 chr10 5555800 5556124 -134760641 - AluSx SINE Alu 0 332 10 5155 102 10 0 chr10 5556124 5556836 -134759929 - LTR30 LTR ERV1 -2 720 2 204 67 0 0 chr10 5558910 5558940 -134757825 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 23 33 0 0 chr10 5564823 5564853 -134751912 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr10 5565311 5565350 -134751415 + (TTA)n Simple_repeat Simple_repeat 2 40 0 859 202 12 6 chr10 5567062 5567235 -134749530 - FAM SINE Alu -1 174 1 388 308 61 35 chr10 5573993 5574191 -134742574 - MIR3 SINE MIR -3 205 3 674 301 74 7 chr10 5574946 5575351 -134741414 - L1M4 LINE L1 -2371 3775 3344 21 36 0 0 chr10 5577839 5577867 -134738898 + AT_rich Low_complexity Low_complexity 1 28 0 412 60 15 60 chr10 5578593 5578660 -134738105 - Alu SINE Alu -17 295 232 251 218 218 11 chr10 5578765 5578852 -134737913 + L2 LINE L2 2940 3044 -269 295 263 116 11 chr10 5581296 5581391 -134735374 + MIR SINE MIR 158 262 0 4109 148 21 83 chr10 5582926 5583253 -134733512 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5583253 5583564 -134733201 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5583564 5583956 -134732809 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5583956 5584250 -134732515 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5584250 5584333 -134732432 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5585208 5585497 -134731268 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5586450 5586562 -134730203 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5586600 5586926 -134729839 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5586930 5587080 -134729685 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5587080 5587374 -134729391 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5587374 5587410 -134729355 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5587489 5587525 -134729240 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5587550 5587752 -134729013 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5588906 5589269 -134727496 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5589661 5590087 -134726678 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5590087 5590349 -134726416 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5590353 5590576 -134726189 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5590908 5591196 -134725569 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5591210 5591301 -134725464 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5591301 5591602 -134725163 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5591602 5591746 -134725019 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5591807 5591951 -134724814 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5592212 5592238 -134724527 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5593187 5593283 -134723482 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5593425 5593734 -134723031 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5594124 5594172 -134722593 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5594578 5594750 -134722015 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5595091 5595143 -134721622 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5595368 5595835 -134720930 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5596011 5596518 -134720247 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5596518 5596791 -134719974 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5596791 5597658 -134719107 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5597658 5597951 -134718814 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5597951 5598443 -134718322 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5598553 5599442 -134717323 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5599432 5599506 -134717259 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5599549 5599577 -134717188 + AT_rich Low_complexity Low_complexity 1 28 0 266 250 22 33 chr10 5700189 5700281 -134616484 + GA-rich Low_complexity Low_complexity 6 96 0 1597 179 31 0 chr10 5700571 5700861 -134615904 + AluJo SINE Alu 1 299 -13 758 146 0 24 chr10 5702165 5702288 -134614477 + AluJ SINE Alu 16 135 -177 1488 220 25 22 chr10 5702693 5703057 -134613708 - MLT1A1 LTR MaLR 0 365 1 315 255 36 0 chr10 5703375 5703502 -134613263 + L1ME3A LINE L1 5862 5995 -169 256 307 13 0 chr10 5703534 5703609 -134613156 + L1ME3A LINE L1 6068 6143 -27 818 176 0 0 chr10 5704125 5704261 -134612504 + AluJ SINE Alu 133 268 -44 718 80 0 18 chr10 5704306 5704419 -134612346 + (GGAA)n Simple_repeat Simple_repeat 2 112 0 1047 136 11 17 chr10 5705116 5705293 -134611472 - AluJo SINE Alu -18 294 119 253 338 69 25 chr10 5705612 5705772 -134610993 + MIR3 SINE MIR 20 186 -22 335 77 0 19 chr10 5706778 5706830 -134609935 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1699 150 11 0 chr10 5706876 5707142 -134609623 - AluJo SINE Alu -43 269 1 180 125 0 0 chr10 5708775 5708807 -134607958 - MIR SINE MIR -119 143 112 228 185 0 65 chr10 5709924 5710016 -134606749 + GA-rich Low_complexity Low_complexity 2 87 0 968 106 17 22 chr10 5710016 5710196 -134606569 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 192 302 23 35 chr10 5710770 5710856 -134605909 + L2 LINE L2 3185 3269 -3 2272 100 0 0 chr10 5710977 5711276 -134605489 - AluSc SINE Alu -10 299 1 271 304 99 31 chr10 5711965 5712126 -134604639 - L2 LINE L2 0 3272 3101 1724 145 3 63 chr10 5712128 5712460 -134604305 + AluJb SINE Alu 1 312 0 2253 98 10 0 chr10 5712654 5712959 -134603806 + AluSx SINE Alu 1 308 -4 2421 93 3 0 chr10 5714334 5714644 -134602121 - AluSx SINE Alu 0 312 2 318 50 0 0 chr10 5714644 5714684 -134602081 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 227 263 158 0 chr10 5715059 5715154 -134601611 - MIR SINE MIR -13 249 140 203 370 14 0 chr10 5715417 5715490 -134601275 + MIR SINE MIR 169 242 -20 360 242 0 0 chr10 5717192 5717287 -134599478 + (CAGG)n Simple_repeat Simple_repeat 3 97 0 339 342 57 0 chr10 5717759 5717911 -134598854 + MIR SINE MIR 6 168 -40 270 264 50 25 chr10 5718050 5718171 -134598594 - MIR SINE MIR -80 182 59 201 196 22 0 chr10 5718710 5718756 -134598009 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 2029 152 7 0 chr10 5720905 5721208 -134595557 + AluSx SINE Alu 1 305 -7 229 286 0 14 chr10 5721233 5721303 -134595462 - MIR SINE MIR -86 122 54 1206 122 0 12 chr10 5721808 5721972 -134594793 + AluJb SINE Alu 138 299 -13 1540 148 41 10 chr10 5722051 5722342 -134594423 + L1MA9 LINE L1 6012 6311 -1 23 0 0 0 chr10 5722345 5722368 -134594397 + AT_rich Low_complexity Low_complexity 1 23 0 1315 148 0 37 chr10 5722972 5723188 -134593577 + AluJb SINE Alu 86 293 -19 2293 78 0 14 chr10 5723416 5723711 -134593054 - AluSc SINE Alu -18 291 1 24 0 0 0 chr10 5723729 5723753 -134593012 + AT_rich Low_complexity Low_complexity 1 24 0 288 229 48 0 chr10 5723775 5723858 -134592907 - ORSL DNA AcHobo -157 118 32 192 347 67 0 chr10 5724170 5724245 -134592520 + MIR SINE MIR 84 163 -99 556 99 0 12 chr10 5724551 5724632 -134592133 + MADE1 DNA Mariner 1 80 0 1837 152 0 49 chr10 5724824 5725152 -134591613 + AluJo SINE Alu 1 312 0 385 313 39 34 chr10 5725827 5726006 -134590759 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5727166 5727276 -134589489 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5728508 5728753 -134588012 + GA-rich Low_complexity Low_complexity 1 251 0 229 225 56 0 chr10 5728860 5728931 -134587834 - L1ME LINE L1 -516 5605 5531 391 175 75 0 chr10 5729476 5729556 -134587209 - MER20 DNA MER1_type -86 133 48 210 139 116 0 chr10 5729679 5729722 -134587043 - L2 LINE L2 0 3272 3225 1489 162 97 35 chr10 5731841 5732131 -134584634 - AluJo SINE Alu -4 308 1 1765 99 0 0 chr10 5732151 5732374 -134584391 - AluSx SINE Alu -89 223 1 519 160 135 58 chr10 5732390 5732546 -134584219 - MER2 DNA MER2_type -135 210 43 341 239 22 22 chr10 5733362 5733454 -134583311 - L1ME4a LINE L1 -74 6047 5956 1426 142 191 0 chr10 5733807 5734095 -134582670 + MER7A DNA MER2_type 5 345 -1 389 261 137 6 chr10 5734397 5734558 -134582207 + MIR SINE MIR 44 225 -37 1777 157 15 0 chr10 5735580 5735854 -134580911 - AluJo SINE Alu -21 291 14 1478 198 16 39 chr10 5738115 5738423 -134578342 - AluJo SINE Alu -11 301 1 2134 108 0 3 chr10 5738542 5738828 -134577937 - AluSx SINE Alu -20 292 8 2655 45 0 13 chr10 5739051 5739364 -134577401 - AluY SINE Alu -2 309 1 301 118 0 0 chr10 5739597 5739648 -134577117 + Alu SINE Alu 251 301 -1 584 201 30 0 chr10 5739656 5739790 -134576975 - L1MB5 LINE L1 -46 6128 5991 256 313 30 0 chr10 5739801 5739900 -134576865 - L2 LINE L2 -34 3238 3137 2117 88 50 0 chr10 5739959 5740242 -134576523 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5740282 5740408 -134576357 - MIR SINE MIR -91 171 47 1376 198 64 28 chr10 5740414 5740574 -134576191 - L1MB5 LINE L1 -193 5981 5828 2335 68 20 0 chr10 5740574 5740866 -134575899 - AluY SINE Alu -13 298 1 1376 198 64 28 chr10 5740866 5741063 -134575702 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5741063 5741299 -134575466 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5741420 5741740 -134575025 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5741824 5742060 -134574705 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5742181 5742203 -134574562 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5742208 5742511 -134574254 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5742525 5742781 -134573984 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5742955 5743006 -134573759 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5743270 5743582 -134573183 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5743609 5743888 -134572877 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5744021 5744220 -134572545 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5744396 5744448 -134572317 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5744448 5744753 -134572012 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5744761 5745076 -134571689 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5745229 5745433 -134571332 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5745439 5745584 -134571181 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5745589 5745879 -134570886 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5746782 5747035 -134569730 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5747133 5747433 -134569332 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5747433 5747492 -134569273 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5747698 5748751 -134568014 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5748751 5749049 -134567716 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5749049 5749137 -134567628 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5749137 5749427 -134567338 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5749427 5749492 -134567273 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5750909 5750927 -134565838 + L1PA7 LINE L1 5319 5336 -818 2136 116 0 3 chr10 5750927 5751211 -134565554 + AluSx SINE Alu 2 284 -28 5432 65 9 9 chr10 5751211 5751932 -134564833 + L1PA7 LINE L1 5335 6058 -96 24 0 0 0 chr10 5752202 5752226 -134564539 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5752295 5752602 -134564163 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5753485 5753752 -134563013 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5754024 5754328 -134562437 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5754493 5754720 -134562045 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5754987 5755020 -134561745 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5757091 5757355 -134559410 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5757948 5758021 -134558744 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5758393 5758486 -134558279 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5758529 5759009 -134557756 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5759009 5759147 -134557618 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5759147 5759293 -134557472 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5759293 5759586 -134557179 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5759586 5759825 -134556940 + L1M3 LINE L1 5250 5603 -580 669 106 7 78 chr10 5759935 5760056 -134556709 - L1M LINE L1 -783 5397 5286 2008 102 42 7 chr10 5760056 5760339 -134556426 - AluSx SINE Alu -19 293 1 669 106 7 78 chr10 5760339 5760359 -134556406 - L1M LINE L1 -894 5286 5266 190 240 60 0 chr10 5760416 5760466 -134556299 + L2 LINE L2 3183 3235 -78 198 0 0 0 chr10 5760466 5760488 -134556277 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2272 95 17 3 chr10 5760506 5760802 -134555963 + AluSx SINE Alu 1 300 -12 490 208 2 97 chr10 5760836 5760933 -134555832 + L1ME2 LINE L1 6005 6084 -82 2214 107 0 0 chr10 5760933 5761214 -134555551 + AluSx SINE Alu 16 296 -16 490 208 2 97 chr10 5761214 5761289 -134555476 + L1ME2 LINE L1 6084 6165 -1 2270 104 0 31 chr10 5761320 5761637 -134555128 + AluSg1 SINE Alu 1 307 -2 673 179 179 21 chr10 5761646 5761724 -134555041 + AluJo SINE Alu 2 66 -246 186 43 0 0 chr10 5761724 5761747 -134555018 + (CAGAC)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5761747 5761797 -134554968 + AluJo SINE Alu 66 107 -205 1649 169 3 44 chr10 5761797 5762093 -134554672 + AluJb SINE Alu 21 304 -8 673 179 179 21 chr10 5762093 5762108 -134554657 + AluJo SINE Alu 107 169 -143 410 135 189 0 chr10 5762477 5762551 -134554214 + AluSg1 SINE Alu 2 89 -220 1413 147 0 22 chr10 5762651 5762883 -134553882 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5762884 5762942 -134553823 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5763940 5764122 -134552643 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5764155 5764205 -134552560 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5764629 5764994 -134551771 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5765217 5765354 -134551411 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5765360 5765559 -134551206 + AluY SINE Alu 86 323 0 379 0 0 0 chr10 5765559 5765601 -134551164 + (TAAA)n Simple_repeat Simple_repeat 2 160 0 1890 150 0 3 chr10 5765604 5765911 -134550854 + AluSx SINE Alu 1 306 -6 464 161 0 0 chr10 5765913 5765994 -134550771 + L1M LINE L1 5312 5392 -788 1908 113 3 7 chr10 5766009 5766315 -134550450 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5766629 5766649 -134550116 + (TA)n Simple_repeat Simple_repeat 2 21 0 1610 184 0 3 chr10 5766977 5767270 -134549495 + AluJb SINE Alu 3 294 -18 1946 142 0 0 chr10 5767928 5768224 -134548541 - AluSx SINE Alu -14 298 3 2164 99 10 0 chr10 5768229 5768532 -134548233 - AluSx SINE Alu -6 306 1 874 182 18 6 chr10 5768532 5768697 -134548068 - AluJb SINE Alu -15 297 131 2254 89 10 0 chr10 5769524 5769827 -134546938 + AluSp SINE Alu 1 306 -7 1720 113 0 90 chr10 5769847 5769976 -134546789 + AluSx SINE Alu 12 151 -161 2078 105 7 3 chr10 5769976 5770270 -134546495 + AluSg SINE Alu 1 295 -15 1720 113 0 90 chr10 5770270 5770450 -134546315 + AluSx SINE Alu 151 293 -19 515 204 106 129 chr10 5771060 5771406 -134545359 + MLT1F LTR MaLR 166 555 0 206 311 0 0 chr10 5771406 5771467 -134545298 - L2 LINE L2 -819 2495 2435 1988 116 3 0 chr10 5771487 5771794 -134544971 + AluSq SINE Alu 1 308 0 1535 185 3 10 chr10 5772055 5772357 -134544408 + AluJb SINE Alu 1 300 -12 298 349 128 45 chr10 5772418 5772871 -134543894 - L2 LINE L2 -4 3268 2739 2232 90 13 0 chr10 5772871 5773171 -134543594 - AluSx SINE Alu -8 304 1 298 349 128 45 chr10 5773171 5773349 -134543416 - L2 LINE L2 -533 2739 2577 1096 123 12 0 chr10 5773499 5773669 -134543096 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5773729 5773751 -134543014 + AT_rich Low_complexity Low_complexity 1 22 0 819 154 67 0 chr10 5773957 5774106 -134542659 - AluJo/FRAM SINE Alu -18 294 136 2077 107 0 3 chr10 5774108 5774398 -134542367 - AluSg1 SINE Alu -20 289 1 863 190 12 0 chr10 5774707 5774870 -134541895 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5776224 5776262 -134540503 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5776953 5777021 -134539744 - MER5A DNA MER1_type -83 106 30 342 313 120 7 chr10 5777391 5777541 -134539224 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5777617 5777639 -134539126 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1998 113 0 0 chr10 5777652 5777926 -134538839 - AluSx SINE Alu -38 274 1 514 127 0 38 chr10 5778182 5778261 -134538504 - Tigger3(Golem) DNA MER2_type -729 2300 2225 2001 90 54 0 chr10 5778313 5778591 -134538174 - AluSc SINE Alu -16 293 1 1137 121 60 16 chr10 5778862 5779044 -134537721 + MER30B DNA MER1_type 1 190 0 181 397 0 15 chr10 5779081 5779149 -134537616 - MIR SINE MIR -195 67 1 638 118 20 92 chr10 5779375 5779413 -134537352 - L1MB3 LINE L1 0 6183 6144 2285 69 16 3 chr10 5779413 5779716 -134537049 - AluSq SINE Alu -6 307 1 638 118 20 92 chr10 5779716 5779829 -134536936 - L1MB3 LINE L1 -39 6144 6043 339 289 20 0 chr10 5779829 5779978 -134536787 - AluSg/x SINE Alu -11 291 140 342 279 62 93 chr10 5780214 5780472 -134536293 + L2 LINE L2 2891 3140 -132 2051 138 0 3 chr10 5780554 5780866 -134535899 + AluSx SINE Alu 1 311 -1 297 143 0 0 chr10 5781091 5781133 -134535632 + MER57A LTR ERV1 295 336 -67 2446 156 34 5 chr10 5781189 5781605 -134535160 - MSTB1 LTR MaLR -1 431 4 2093 103 0 0 chr10 5782072 5782390 -134534375 + AluSx SINE Alu 1 318 0 1087 156 23 37 chr10 5782632 5782850 -134533915 - MER20 DNA MER1_type -4 215 1 2106 118 0 22 chr10 5783177 5783492 -134533273 + AluSx SINE Alu 1 308 -4 2168 86 0 13 chr10 5783500 5783803 -134532962 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5784076 5784109 -134532656 + AT_rich Low_complexity Low_complexity 1 33 0 1709 76 167 8 chr10 5784111 5784362 -134532403 + AluSg SINE Alu 1 291 -9 1371 161 95 0 chr10 5784373 5784646 -134532119 + AluJb SINE Alu 1 299 -13 2080 93 6 29 chr10 5784991 5785304 -134531461 + AluSc SINE Alu 4 309 0 2145 75 34 17 chr10 5785337 5785631 -134531134 + AluSg SINE Alu 1 299 -11 285 250 125 0 chr10 5785755 5785843 -134530922 - MER103 DNA DNA 0 166 68 315 300 119 92 chr10 5785843 5785949 -134530816 + L1ME LINE L1 5553 5655 -507 1726 158 49 0 chr10 5785949 5786233 -134530532 + AluJb SINE Alu 1 298 -14 1936 145 3 0 chr10 5786235 5786539 -134530226 + AluSx SINE Alu 1 305 -7 315 300 119 92 chr10 5786539 5786656 -134530109 + L1ME LINE L1 5655 5785 -377 2155 95 10 0 chr10 5786801 5787106 -134529659 - AluSp SINE Alu -4 309 2 442 279 71 63 chr10 5787247 5787501 -134529264 + HAL1 LINE L1 19 274 -2233 2080 102 3 0 chr10 5787749 5788042 -134528723 - AluSp SINE Alu -19 294 1 1064 88 0 0 chr10 5788042 5788178 -134528587 - AluSq/x SINE Alu -177 136 1 373 223 109 63 chr10 5788205 5788380 -134528385 + MLT1J LTR MaLR 281 463 -48 911 169 0 0 chr10 5788380 5788540 -134528225 - FRAM SINE Alu -12 164 5 529 235 129 42 chr10 5789158 5789375 -134527390 + MLT1H LTR MaLR 109 344 -205 322 207 0 0 chr10 5789449 5789507 -134527258 + MLT1H LTR MaLR 492 549 0 1629 140 0 111 chr10 5789583 5789925 -134526840 + AluJo SINE Alu 1 304 -8 2257 78 10 0 chr10 5789986 5790280 -134526485 + AluSx SINE Alu 1 297 -15 374 251 113 88 chr10 5790864 5791103 -134525662 + L1MC4a LINE L1 5600 5844 -1964 2106 100 7 0 chr10 5791405 5791696 -134525069 + AluSx SINE Alu 1 293 -19 286 286 99 11 chr10 5792002 5792093 -134524672 + L2 LINE L2 1089 1187 -2127 184 280 0 67 chr10 5792159 5792234 -134524531 + MER5A DNA MER1_type 5 74 -115 418 283 44 0 chr10 5792238 5792397 -134524368 + L1MB1 LINE L1 5992 6157 -11 265 250 0 0 chr10 5792397 5792449 -134524316 + LTR30 LTR ERV1 1 52 -670 1844 85 229 178 chr10 5792449 5792955 -134523810 + LTR12 LTR ERV1 53 584 -130 10485 91 10 8 chr10 5792965 5794387 -134522378 + HERV9 LTR ERV1 1277 2700 -5699 2157 65 29 0 chr10 5794487 5794766 -134521999 + AluSp SINE Alu 23 309 -4 901 143 0 0 chr10 5794768 5794901 -134521864 + AluSg/x SINE Alu 134 266 -44 517 341 81 0 chr10 5794906 5795129 -134521636 + L3 LINE CR1 1028 1268 -309 675 248 94 71 chr10 5795158 5795412 -134521353 + MIR SINE MIR 3 262 0 264 178 27 27 chr10 5795574 5795647 -134521118 + L1ME1 LINE L1 6089 6161 -5 358 249 254 46 chr10 5795655 5795852 -134520913 + L1MC4a LINE L1 5941 6178 -1630 180 0 0 0 chr10 5795959 5795979 -134520786 + (A)n Simple_repeat Simple_repeat 1 20 0 1580 179 4 0 chr10 5796008 5796288 -134520477 - AluJo SINE Alu -26 286 6 2214 99 0 10 chr10 5796880 5797183 -134519582 + AluSx SINE Alu 1 300 -12 701 273 24 0 chr10 5797186 5797351 -134519414 - MER58A DNA MER1_type -30 194 26 533 234 117 17 chr10 5797374 5797605 -134519160 + L1ME3A LINE L1 5808 6061 -109 2165 118 0 3 chr10 5797622 5797926 -134518839 + AluSx SINE Alu 1 303 -9 626 164 164 0 chr10 5798392 5798563 -134518202 - Charlie1 DNA MER1_type -5 2756 2558 1326 163 0 25 chr10 5798577 5798817 -134517948 - AluJb SINE Alu -15 297 64 2328 184 58 28 chr10 5798830 5799412 -134517353 - Charlie1 DNA MER1_type -217 2544 1945 270 273 105 49 chr10 5802542 5802685 -134514080 - L2 LINE L2 -186 3086 2936 183 292 42 0 chr10 5802805 5802853 -134513912 - L2 LINE L2 -570 2744 2695 2249 106 0 0 chr10 5802868 5803171 -134513594 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5803384 5803407 -134513358 + (TG)n Simple_repeat Simple_repeat 2 24 0 1995 108 9 49 chr10 5803417 5803742 -134513023 - AluSx SINE Alu 0 312 1 1633 162 45 3 chr10 5803789 5804079 -134512686 - AluJb SINE Alu -10 302 1 319 308 0 26 chr10 5804635 5804752 -134512013 + MLT1J1 LTR MaLR 226 339 -107 283 230 54 0 chr10 5804808 5804882 -134511883 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5805032 5805054 -134511711 + AT_rich Low_complexity Low_complexity 1 22 0 369 265 104 42 chr10 5805817 5805995 -134510770 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 5807074 5807100 -134509665 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1810 126 3 18 chr10 5807102 5807387 -134509378 - AluSx SINE Alu -31 281 1 2054 92 23 10 chr10 5808499 5808804 -134507961 + AluSq SINE Alu 1 309 -4 1619 157 21 14 chr10 5808811 5809091 -134507674 + AluJo SINE Alu 1 282 -30 246 357 20 0 chr10 5809198 5809296 -134507469 - L2 LINE L2 -221 3051 2952 697 190 20 77 chr10 5809331 5809490 -134507275 - MER53 DNA DNA -5 184 36 1980 136 0 13 chr10 5809490 5809806 -134506959 - AluSx SINE Alu 0 312 1 697 190 20 77 chr10 5809806 5809841 -134506924 - MER53 DNA DNA -153 36 1 488 290 103 60 chr10 5809968 5810316 -134506449 - MLT1J2 LTR MaLR -24 426 64 2354 87 0 0 chr10 5810321 5810630 -134506135 + AluSg SINE Alu 1 309 -1 1458 163 22 22 chr10 5810738 5810858 -134505907 + AluJb SINE Alu 11 130 -182 2304 91 0 0 chr10 5810858 5811155 -134505610 + AluSx SINE Alu 1 297 -15 1458 163 22 22 chr10 5811155 5811311 -134505454 + AluJb SINE Alu 129 287 -25 1962 145 3 0 chr10 5811588 5811891 -134504874 + AluSx SINE Alu 1 304 -8 199 311 0 0 chr10 5811918 5811963 -134504802 - MIR SINE MIR -137 125 81 1130 139 6 0 chr10 5812481 5812654 -134504111 + AluJo SINE Alu 1 174 -138 2317 211 56 36 chr10 5812754 5813124 -134503641 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5813124 5813418 -134503347 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5813418 5813690 -134503075 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5813690 5813726 -134503039 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5813726 5815367 -134501398 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5815370 5815429 -134501336 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5815466 5815501 -134501264 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5815841 5816148 -134500617 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5816637 5816932 -134499833 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5817697 5817994 -134498771 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5818661 5818769 -134497996 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5818917 5818965 -134497800 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5818965 5819181 -134497584 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5819181 5819234 -134497531 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5819237 5819537 -134497228 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5819579 5819870 -134496895 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5819876 5820056 -134496709 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5820056 5820668 -134496097 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5820734 5820832 -134495933 + Tigger2 DNA MER2_type 2451 2534 -174 1959 136 0 7 chr10 5820832 5821133 -134495632 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5821133 5821235 -134495530 + Tigger2 DNA MER2_type 2534 2640 -68 640 159 9 0 chr10 5821237 5821344 -134495421 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5821344 5821479 -134495286 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5821517 5821767 -134494998 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5822109 5822347 -134494418 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5822430 5822547 -134494218 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5822886 5823169 -134493596 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5823396 5823509 -134493256 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5824076 5824214 -134492551 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5824287 5824475 -134492290 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5824503 5824791 -134491974 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5825791 5825953 -134490812 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5826010 5826128 -134490637 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5826150 5826505 -134490260 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5826516 5826678 -134490087 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5826686 5826732 -134490033 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5826743 5827020 -134489745 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5827052 5827179 -134489586 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5827184 5827240 -134489525 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5827287 5827592 -134489173 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5828203 5828375 -134488390 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 5828523 5828827 -134487938 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 5828913 5829218 -134487547 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 5829279 5829585 -134487180 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 5829590 5829899 -134486866 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 5829918 5830079 -134486686 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 5831112 5831162 -134485603 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 5831162 5831468 -134485297 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 5831468 5831613 -134485152 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 5831613 5831906 -134484859 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 5831906 5831944 -134484821 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 5831944 5832231 -134484534 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 5832231 5832534 -134484231 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 5832534 5832819 -134483946 + AluSc SINE Alu 1 285 -24 541 82 61 10 chr10 5832919 5833017 -134483748 + HERV17 LTR ERV1 3037 3139 -5260 6308 91 8 11 chr10 5833024 5833892 -134482873 + HERV17 LTR ERV1 4080 4944 -3455 2063 132 77 90 chr10 5833893 5834815 -134481950 + HERV17 LTR ERV1 703 1740 -5156 * 5642 92 8 12 chr10 5834813 5835586 -134481179 + HERV17 LTR ERV1 7626 8395 -4 250 269 0 0 chr10 5835591 5835643 -134481122 + LTR30 LTR ERV1 1 52 -670 1031 77 8 0 chr10 5835643 5835773 -134480992 + LTR12 LTR ERV1 53 183 -531 289 93 0 0 chr10 5835756 5835799 -134480966 + pTR5 LTR ERV1 1963 2005 -433 * 357 204 45 68 chr10 5835799 5835931 -134480834 + LTR30 LTR ERV1 552 723 -71 1338 132 14 7 chr10 5835931 5836137 -134480628 + LTR12 LTR ERV1 276 581 -133 1273 94 124 0 chr10 5836171 5836373 -134480392 - MER30 DNA MER1_type 0 230 4 686 233 14 0 chr10 5836375 5836521 -134480244 + L1MA10 LINE L1 6186 6333 -1 249 254 56 0 chr10 5836535 5836606 -134480159 + MER5A DNA MER1_type 62 136 -53 541 259 73 0 chr10 5836647 5836852 -134479913 + L2 LINE L2 1301 1520 -1794 755 106 89 0 chr10 5837000 5837123 -134479642 - L1PA16 LINE L1 -9 6157 6024 212 236 145 21 chr10 5837264 5837434 -134479331 + L2 LINE L2 1638 1876 -1438 1724 129 71 4 chr10 5837588 5837868 -134478897 - AluJo SINE Alu -13 299 1 2114 85 3 0 chr10 5838288 5838611 -134478154 + AluSp SINE Alu 1 324 0 182 235 82 71 chr10 5839145 5839243 -134477522 + L2 LINE L2 1903 2001 -1313 1992 130 7 0 chr10 5839380 5839681 -134477084 + AluSx SINE Alu 1 303 -9 2312 73 0 0 chr10 5839750 5840039 -134476726 - AluY SINE Alu -22 289 1 1925 121 3 48 chr10 5840044 5840212 -134476553 - AluSx SINE Alu -12 300 151 2151 100 0 3 chr10 5840212 5840512 -134476253 - AluY SINE Alu -11 300 2 1925 121 3 48 chr10 5840512 5840657 -134476108 - AluSx SINE Alu -161 151 1 308 184 53 13 chr10 5840687 5840763 -134476002 + L1ME4a LINE L1 5998 6076 -45 2073 105 7 0 chr10 5841084 5841370 -134475395 - AluSc SINE Alu -19 290 3 259 258 15 0 chr10 5842415 5842481 -134474284 + MIR SINE MIR 179 245 -17 24 0 0 0 chr10 5842515 5842539 -134474226 + AT_rich Low_complexity Low_complexity 1 24 0 681 280 14 14 chr10 5842553 5842764 -134474001 - L2 LINE L2 -104 3209 2999 1265 111 0 0 chr10 5842894 5843066 -134473699 - AluSg/x SINE Alu -10 302 131 180 0 0 0 chr10 5843066 5843086 -134473679 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2162 85 0 0 chr10 5843086 5843367 -134473398 - AluSx SINE Alu -31 281 1 222 161 36 36 chr10 5844035 5844091 -134472674 + A-rich Low_complexity Low_complexity 3 58 0 2058 134 0 0 chr10 5844290 5844596 -134472169 - AluSx SINE Alu -6 306 1 2026 109 41 0 chr10 5845701 5845994 -134470771 + AluSg SINE Alu 1 305 -5 2112 99 20 0 chr10 5846375 5846667 -134470098 + AluSx SINE Alu 1 298 -14 1782 127 6 47 chr10 5847079 5847401 -134469364 + AluSx SINE Alu 1 309 -3 210 179 21 53 chr10 5847684 5847779 -134468986 + (CAAA)n Simple_repeat Simple_repeat 3 94 0 1553 115 51 0 chr10 5847950 5848184 -134468581 + AluSg SINE Alu 61 306 -4 2111 103 20 0 chr10 5848564 5848856 -134467909 + AluSx SINE Alu 1 298 -14 1956 119 3 49 chr10 5849249 5849576 -134467189 + AluSx SINE Alu 1 312 0 2977 88 65 18 chr10 5849801 5850245 -134466520 - MER4C LTR ERV1 0 465 1 957 135 0 0 chr10 5850338 5850471 -134466294 - FLAM_C SINE Alu 0 133 1 39 0 0 37 chr10 5850771 5850807 -134465958 + AT_rich Low_complexity Low_complexity 1 37 -15 390 21 0 0 chr10 5850807 5850854 -134465911 + (TA)n Simple_repeat Simple_repeat 2 48 0 1916 96 0 41 chr10 5850854 5851062 -134465703 - AluSc SINE Alu -28 281 87 2308 71 7 0 chr10 5851062 5851359 -134465406 - AluY SINE Alu -12 299 1 1916 96 0 41 chr10 5851359 5851443 -134465322 - AluSc SINE Alu -222 87 1 39 0 0 37 chr10 5851443 5851459 -134465306 + AT_rich Low_complexity Low_complexity 35 52 0 1247 98 0 0 chr10 5851634 5851798 -134464967 + AluSg SINE Alu 1 164 -146 227 83 0 42 chr10 5851828 5851876 -134464889 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1722 142 69 0 chr10 5852692 5852967 -134463798 - AluSx SINE Alu -18 294 1 417 307 102 28 chr10 5853069 5853284 -134463481 - MIR SINE MIR -16 246 16 330 376 16 11 chr10 5853629 5853815 -134462950 + L2 LINE L2 2362 2548 -766 2203 111 0 9 chr10 5853821 5854137 -134462628 + AluSq SINE Alu 1 313 0 461 346 77 58 chr10 5854149 5854543 -134462222 + L2 LINE L2 2832 3236 -36 2313 69 0 7 chr10 5854543 5854848 -134461917 - AluY SINE Alu -2 309 7 461 346 77 58 chr10 5854848 5854881 -134461884 + L2 LINE L2 3236 3267 -5 355 302 116 32 chr10 5854910 5855099 -134461666 - L1 LINE L1 -751 5395 5191 2071 116 0 0 chr10 5855692 5855985 -134460780 + AluSx SINE Alu 12 304 -8 447 244 58 47 chr10 5856427 5856599 -134460166 - MIR SINE MIR -3 259 86 2065 81 0 39 chr10 5856747 5857054 -134459711 - AluSq SINE Alu -15 298 4 311 237 166 22 chr10 5857901 5858040 -134458725 + L1MD2 LINE L1 6053 6211 -148 25 31 0 0 chr10 5858615 5858647 -134458118 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 5858712 5858789 -134457976 + (CCGGG)n Simple_repeat Simple_repeat 1 75 0 32 0 0 0 chr10 5859659 5859691 -134457074 + GC_rich Low_complexity Low_complexity 1 32 0 232 221 14 64 chr10 5859799 5859939 -134456826 + G-rich Low_complexity Low_complexity 2 134 0 196 296 111 68 chr10 5860333 5860495 -134456270 - MIR SINE MIR -20 242 74 2106 83 3 10 chr10 5860995 5861283 -134455482 - AluSx SINE Alu -26 286 1 1797 130 3 18 chr10 5862395 5862708 -134454057 + AluSx SINE Alu 1 309 0 409 265 96 42 chr10 5863787 5863966 -134452799 + MIR3 SINE MIR 3 211 -51 22 0 0 0 chr10 5864729 5864751 -134452014 + AT_rich Low_complexity Low_complexity 1 22 0 450 282 26 11 chr10 5864901 5865306 -134451459 - MLT1J1 LTR MaLR -5 441 37 1889 176 22 35 chr10 5867500 5867783 -134448982 - MLT1A1 LTR MaLR 0 365 87 2183 131 3 0 chr10 5867783 5868081 -134448684 - AluSx SINE Alu -13 299 1 1889 176 22 35 chr10 5868081 5868167 -134448598 - MLT1A1 LTR MaLR -278 87 1 257 0 30 0 chr10 5868672 5868705 -134448060 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 313 71 0 0 chr10 5869689 5869731 -134447034 - 5S rRNA rRNA -79 42 1 2227 142 0 0 chr10 5870186 5870496 -134446269 + AluSx SINE Alu 1 310 -2 2093 98 56 3 chr10 5870544 5870829 -134445936 - AluSq SINE Alu -13 300 1 2225 129 13 0 chr10 5870926 5871235 -134445530 - AluSq SINE Alu 0 313 1 218 337 36 12 chr10 5871435 5871518 -134445247 + L3b LINE CR1 1404 1488 -95 23 97 0 0 chr10 5871689 5871761 -134445004 + AT_rich Low_complexity Low_complexity 1 72 0 1164 126 0 6 chr10 5871865 5872024 -134444741 - AluSg/x SINE Alu -39 270 113 327 125 0 0 chr10 5872044 5872100 -134444665 - Alu SINE Alu -245 56 1 2351 77 7 0 chr10 5872703 5873000 -134443765 - AluSp SINE Alu -14 299 1 1632 141 87 7 chr10 5873427 5873704 -134443061 - AluJo SINE Alu -13 299 1 750 148 0 41 chr10 5873946 5874068 -134442697 + FLAM_C SINE Alu 2 118 -25 31 0 0 0 chr10 5874068 5874099 -134442666 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr10 5874201 5874242 -134442523 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr10 5874550 5874574 -134442191 + AT_rich Low_complexity Low_complexity 1 24 0 2058 126 3 7 chr10 5874606 5874932 -134441833 + AluSx SINE Alu 1 312 0 2218 109 3 10 chr10 5876334 5876636 -134440129 - AluSx SINE Alu -12 300 1 180 0 0 0 chr10 5876641 5876661 -134440104 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2431 215 11 70 chr10 5876661 5876844 -134439921 - L1M4 LINE L1 -3119 3027 2835 2126 151 0 0 chr10 5876844 5877143 -134439622 - AluSx SINE Alu -11 301 3 2431 215 11 70 chr10 5877143 5877713 -134439052 - L1M4 LINE L1 -3311 2835 2319 260 293 104 47 chr10 5877752 5877858 -134438907 - MIR SINE MIR -63 145 34 1929 97 0 34 chr10 5877966 5878234 -134438531 - AluSx SINE Alu -5 307 49 575 330 58 5 chr10 5878839 5879027 -134437738 - L3 LINE CR1 -1 1576 1379 262 287 41 49 chr10 5879025 5879147 -134437618 - MIR3 SINE MIR -87 121 1 * 2248 119 0 0 chr10 5879371 5879666 -134437099 + AluSx SINE Alu 1 295 -17 326 356 108 16 chr10 5881077 5881383 -134435382 - L2 LINE L2 -118 3195 2862 1976 131 10 13 chr10 5881451 5881749 -134435016 + AluSx SINE Alu 1 297 -15 366 250 117 51 chr10 5882034 5882230 -134434535 - MLT1A2 LTR MaLR -156 209 1 260 295 82 16 chr10 5883294 5883416 -134433349 - L1MB7 LINE L1 -9 6175 6046 423 284 216 21 chr10 5884215 5884409 -134432356 - MIR SINE MIR 0 262 31 646 263 72 0 chr10 5888098 5888292 -134428473 + Charlie1 DNA MER1_type 1787 1994 -767 1455 224 69 16 chr10 5888295 5888574 -134428191 + Charlie1 DNA MER1_type 2307 2619 -142 2264 120 0 0 chr10 5888574 5888865 -134427900 + AluSx SINE Alu 1 291 -21 1455 224 69 16 chr10 5888865 5889017 -134427748 + Charlie1 DNA MER1_type 2619 2761 0 3638 173 57 16 chr10 5889204 5889973 -134426792 - L1MC3 LINE L1 -18 7767 6967 366 271 90 23 chr10 5891263 5891436 -134425329 + MIR3 SINE MIR 6 190 -64 198 257 157 14 chr10 5891491 5891561 -134425204 - L2 LINE L2 0 3272 3193 2157 126 3 0 chr10 5892260 5892553 -134424212 - AluSx SINE Alu -18 294 1 203 56 56 0 chr10 5892932 5892968 -134423797 + A-rich Low_complexity Low_complexity 3 40 0 396 280 10 0 chr10 5893506 5893606 -134423159 - MIR3 SINE MIR -100 108 8 2169 115 10 0 chr10 5893940 5894236 -134422529 - AluSq SINE Alu -14 299 1 239 198 136 37 chr10 5894374 5894455 -134422310 + MIR SINE MIR 54 142 -66 815 131 0 16 chr10 5895311 5895433 -134421332 - FLAM_C SINE Alu -15 128 9 2266 109 23 0 chr10 5895481 5895784 -134420981 - AluSx SINE Alu -2 310 1 308 217 0 0 chr10 5896121 5896181 -134420584 - L1MB8 LINE L1 -18 6160 6101 265 293 75 45 chr10 5896347 5896480 -134420285 + MIR3 SINE MIR 1 137 -71 2378 108 0 3 chr10 5897160 5897467 -134419298 + AluSx SINE Alu 1 306 -6 2038 146 3 0 chr10 5897516 5897810 -134418955 - AluJo SINE Alu -7 305 11 428 289 78 8 chr10 5898461 5898589 -134418176 - L2 LINE L2 -16 3297 3161 915 262 23 0 chr10 5898924 5899138 -134417627 - MER58A DNA MER1_type -5 219 1 240 238 130 77 chr10 5899647 5899908 -134416857 - L1MC5 LINE L1 -384 7577 7303 1586 143 10 68 chr10 5900123 5900417 -134416348 - AluJb SINE Alu -19 293 17 312 291 156 33 chr10 5901041 5901234 -134415531 - L1MC4a LINE L1 -1487 6321 6153 1955 160 0 10 chr10 5901234 5901534 -134415231 + AluSx SINE Alu 3 299 -13 312 291 156 33 chr10 5901534 5901762 -134415003 - L1MC4a LINE L1 -1655 6153 5848 792 254 65 65 chr10 5901830 5902083 -134414682 - L1MC4a LINE L1 -1950 5858 5602 1818 156 7 3 chr10 5902083 5902387 -134414378 - AluJb SINE Alu 0 305 1 792 254 65 65 chr10 5902387 5902471 -134414294 - L1MC4a LINE L1 -2205 5603 5520 2304 120 0 0 chr10 5902476 5902777 -134413988 + AluSx SINE Alu 1 301 -11 2018 142 0 29 chr10 5903013 5903322 -134413443 - AluSx SINE Alu -12 300 1 2193 115 3 16 chr10 5903735 5904048 -134412717 - AluSx SINE Alu -3 309 1 1510 151 120 8 chr10 5904081 5904339 -134412426 - AluSg1 SINE Alu -9 300 14 21 0 0 0 chr10 5904346 5904367 -134412398 + AT_rich Low_complexity Low_complexity 1 21 0 256 248 62 69 chr10 5904368 5904513 -134412252 - MER112 DNA MER1_type -51 209 66 311 283 91 0 chr10 5904575 5904674 -134412091 + L1ME LINE L1 5671 5778 -343 317 342 90 0 chr10 5905250 5905405 -134411360 - MIR SINE MIR -19 243 75 23 0 0 0 chr10 5905597 5905620 -134411145 + AT_rich Low_complexity Low_complexity 1 23 0 28 48 0 0 chr10 5906886 5906928 -134409837 + AT_rich Low_complexity Low_complexity 1 42 0 626 168 62 62 chr10 5907120 5907281 -134409484 + AluJb SINE Alu 134 294 -18 205 291 204 67 chr10 5907287 5907404 -134409361 - L2 LINE L2 -668 2646 2546 883 216 22 0 chr10 5907404 5907589 -134409176 + MER5A DNA MER1_type 1 189 0 205 291 204 67 chr10 5907589 5908158 -134408607 - L2 LINE L2 -768 2546 1866 222 37 0 0 chr10 5908266 5908293 -134408472 + (TG)n Simple_repeat Simple_repeat 2 28 0 391 249 118 70 chr10 5908350 5908543 -134408222 + HAL1 LINE L1 845 1027 -1480 1649 93 19 5 chr10 5908543 5908758 -134408007 + AluSx SINE Alu 1 218 -94 391 249 118 70 chr10 5908758 5908896 -134407869 + HAL1 LINE L1 1027 1201 -1306 1920 144 37 3 chr10 5908896 5909195 -134407570 + AluSx SINE Alu 1 309 -3 391 249 118 70 chr10 5909195 5909260 -134407505 + HAL1 LINE L1 1201 1261 -1246 2273 97 0 0 chr10 5909286 5909575 -134407190 - AluY SINE Alu -22 289 1 232 167 0 0 chr10 5909711 5909759 -134407006 + Alu SINE Alu 255 302 0 388 270 44 73 chr10 5909759 5909856 -134406909 + HAL1 LINE L1 1190 1288 -1219 2343 87 0 0 chr10 5909856 5910145 -134406620 - AluY SINE Alu -22 289 1 388 270 44 73 chr10 5910145 5910251 -134406514 + HAL1 LINE L1 1288 1387 -1120 1709 134 19 11 chr10 5910253 5910521 -134406244 + AluJo SINE Alu 1 270 -42 275 246 115 71 chr10 5910702 5910954 -134405811 + HAL1 LINE L1 2245 2507 0 1739 158 4 7 chr10 5911231 5911504 -134405261 - AluJo SINE Alu -15 297 26 2441 109 0 0 chr10 5912863 5913175 -134403590 - AluSx SINE Alu 0 312 1 1039 275 67 73 chr10 5913792 5914461 -134402304 + PABL_B LTR ERV1 1 665 -2 386 238 69 10 chr10 5914468 5914569 -134402196 - MLT1L LTR MaLR -339 276 170 351 357 85 5 chr10 5914739 5914963 -134401802 - MIR SINE MIR -9 253 12 866 163 12 25 chr10 5915356 5915516 -134401249 - FRAM SINE Alu -17 159 2 2330 102 0 0 chr10 5916476 5916769 -134399996 + AluSx SINE Alu 1 293 -19 1895 138 24 3 chr10 5917331 5917620 -134399145 - AluJb SINE Alu -17 295 1 2295 107 0 0 chr10 5918510 5918808 -134397957 - AluSx SINE Alu -14 298 1 26 30 0 0 chr10 5918831 5918864 -134397901 + AT_rich Low_complexity Low_complexity 1 33 0 2283 104 3 0 chr10 5919756 5920045 -134396720 + AluSx SINE Alu 2 291 -21 535 144 72 0 chr10 5920217 5920314 -134396451 - L1PA16 LINE L1 -5 6161 6058 193 245 20 20 chr10 5920412 5920461 -134396304 - L2 LINE L2 -3 3310 3262 411 243 27 70 chr10 5920549 5920734 -134396031 + MLT1H LTR MaLR 107 283 -266 2269 104 0 16 chr10 5920796 5921112 -134395653 + AluY SINE Alu 1 311 0 903 145 45 73 chr10 5921112 5921282 -134395483 + AluSg/x SINE Alu 126 292 -18 1960 149 17 7 chr10 5921484 5921773 -134394992 + AluSx SINE Alu 1 292 -20 886 150 0 0 chr10 5921773 5921898 -134394867 - AluJo SINE Alu -182 130 3 363 259 54 45 chr10 5921911 5922023 -134394742 + MIR3 SINE MIR 53 165 -43 677 189 0 0 chr10 5923362 5923468 -134393297 + FLAM_C SINE Alu 2 107 -36 544 138 0 0 chr10 5924103 5924197 -134392568 - AluJ/FRAM SINE Alu -3 309 216 831 157 64 7 chr10 5924205 5924345 -134392420 - AluSq/x SINE Alu -164 148 1 842 152 0 45 chr10 5924402 5924534 -134392231 - FLAM_C SINE Alu -17 126 1 2284 101 3 0 chr10 5925042 5925339 -134391426 - AluSp SINE Alu -15 298 1 2434 96 0 0 chr10 5925954 5926255 -134390510 - AluSx SINE Alu -11 301 1 2312 109 0 31 chr10 5926880 5927201 -134389564 - AluSx SINE Alu -1 311 1 2281 125 0 0 chr10 5927211 5927514 -134389251 - AluSg SINE Alu -7 303 1 2200 126 3 0 chr10 5927523 5927832 -134388933 - AluSx SINE Alu -2 310 1 512 275 108 12 chr10 5927948 5928188 -134388577 + L1MC4a LINE L1 5636 5898 -1910 1890 171 0 3 chr10 5928323 5928627 -134388138 - AluSx SINE Alu -9 303 1 248 239 0 45 chr10 5928878 5928945 -134387820 + C-rich Low_complexity Low_complexity 4 67 0 907 119 8 15 chr10 5929111 5929245 -134387520 - FLAM_C SINE Alu 0 133 1 1712 153 0 67 chr10 5930740 5930852 -134385913 + AluJo SINE Alu 1 119 -193 2272 119 0 3 chr10 5930852 5931155 -134385610 - AluSx SINE Alu -10 302 1 1712 153 0 67 chr10 5931155 5931356 -134385409 + AluJo SINE Alu 119 293 -19 2304 117 0 0 chr10 5932250 5932550 -134384215 + AluSx SINE Alu 1 300 -12 1311 262 91 12 chr10 5932981 5933409 -134383356 + LTR40b LTR ERVL 1 462 0 1944 143 0 29 chr10 5934100 5934408 -134382357 - AluJo SINE Alu -13 299 1 288 326 30 30 chr10 5935486 5935618 -134381147 - MIR SINE MIR -111 151 20 2406 95 0 0 chr10 5935657 5935961 -134380804 - AluSx SINE Alu -8 304 1 1418 80 0 6 chr10 5936715 5936890 -134379875 + AluSq SINE Alu 87 260 -53 778 93 0 0 chr10 5936891 5936988 -134379777 - AluS SINE Alu -214 98 2 387 60 0 0 chr10 5937106 5937156 -134379609 + (CCTTG)n Simple_repeat Simple_repeat 2 51 0 2325 95 0 0 chr10 5937158 5937443 -134379322 - AluSc SINE Alu -24 285 1 183 265 157 20 chr10 5937537 5937639 -134379126 - L2 LINE L2 -2 3270 3155 2142 115 3 3 chr10 5937717 5938013 -134378752 + AluSx SINE Alu 1 296 -16 708 287 87 53 chr10 5938448 5938954 -134377811 - L1MCc LINE L1 -5185 1238 716 479 268 43 39 chr10 5938969 5939223 -134377542 - L1M4 LINE L1 -1306 4840 4586 308 56 33 89 chr10 5939234 5939324 -134377441 + (TTAAA)n Simple_repeat Simple_repeat 1 85 0 1684 154 50 18 chr10 5939324 5939604 -134377161 - AluJo SINE Alu -23 289 1 1354 234 37 23 chr10 5939607 5940039 -134376726 - L1M4 LINE L1 -1495 4651 4214 1136 199 44 17 chr10 5940038 5940335 -134376430 - L1MEc LINE L1 -4243 2153 1849 * 377 248 9 9 chr10 5940335 5940448 -134376317 - L1MEc LINE L1 -6004 201 89 1489 156 13 0 chr10 5940629 5940944 -134375821 - AluJo SINE Alu 0 372 55 197 264 99 22 chr10 5941508 5941599 -134375166 - L2 LINE L2 -21 3251 3154 221 344 65 42 chr10 5941953 5942168 -134374597 + L2 LINE L2 2544 2763 -551 354 67 0 0 chr10 5942295 5942374 -134374391 - Alu SINE Alu 0 319 241 841 225 34 41 chr10 5943176 5943443 -134373322 - L1M4 LINE L1 -1592 4554 4290 1934 194 35 28 chr10 5943444 5943926 -134372839 + L1ME1 LINE L1 4832 5316 -849 2022 112 0 0 chr10 5943965 5944232 -134372533 - AluSx SINE Alu -37 275 9 1144 217 56 11 chr10 5944243 5944529 -134372236 + L1ME1 LINE L1 5303 5601 -565 2328 116 0 0 chr10 5944535 5944846 -134371919 + AluSx SINE Alu 1 311 -1 33 0 0 0 chr10 5944846 5944879 -134371886 + AT_rich Low_complexity Low_complexity 1 33 0 520 206 0 11 chr10 5944881 5944973 -134371792 + AluJb SINE Alu 205 295 -17 1833 225 48 33 chr10 5944973 5945538 -134371227 + L1ME1 LINE L1 5596 6334 0 2213 101 3 29 chr10 5945545 5945861 -134370904 + AluSg SINE Alu 1 308 -2 22 0 0 0 chr10 5947409 5947431 -134369334 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 5948064 5948094 -134368671 + GC_rich Low_complexity Low_complexity 1 30 0 507 126 53 0 chr10 5948456 5948551 -134368214 + L1PA13 LINE L1 6064 6163 0 2162 121 3 10 chr10 5948556 5948869 -134367896 + AluSx SINE Alu 1 311 -1 414 276 34 63 chr10 5949211 5949450 -134367315 - L1ME LINE L1 -394 5727 5496 21 57 0 0 chr10 5949453 5949488 -134367277 + AT_rich Low_complexity Low_complexity 1 35 0 2394 97 0 0 chr10 5949862 5950162 -134366603 + AluSx SINE Alu 1 300 -12 2274 155 27 12 chr10 5950182 5950588 -134366177 + Tigger4(Zombi) DNA MER2_type 1 412 -2319 830 87 0 0 chr10 5950589 5950692 -134366073 + FLAM_C SINE Alu 1 103 -40 779 201 7 0 chr10 5950696 5950835 -134365930 - AluJo SINE Alu -149 163 24 4505 142 25 16 chr10 5950835 5951609 -134365156 + Tigger4(Zombi) DNA MER2_type 1207 1987 -744 2022 150 0 16 chr10 5951954 5952268 -134364497 - AluJb SINE Alu -3 309 1 3065 149 19 21 chr10 5952268 5952822 -134363943 + Tigger4(Zombi) DNA MER2_type 2177 2731 0 1949 211 67 19 chr10 5953494 5954014 -134362751 - L1MD2 LINE L1 -2 6357 5813 1591 203 53 58 chr10 5954090 5954468 -134362297 - MLT1C LTR MaLR 0 467 90 2263 109 0 3 chr10 5954468 5954772 -134361993 + AluSg SINE Alu 6 308 -2 1591 203 53 58 chr10 5954772 5954862 -134361903 - MLT1C LTR MaLR -377 90 1 2131 137 0 0 chr10 5955378 5955685 -134361080 - AluJb SINE Alu -5 307 1 1470 103 0 10 chr10 5956543 5956738 -134360027 - AluSx SINE Alu -119 193 1 1684 181 0 7 chr10 5957120 5957396 -134359369 - AluJo SINE Alu -38 274 1 783 205 56 0 chr10 5957483 5957644 -134359121 + MIR SINE MIR 89 258 -4 1819 174 3 0 chr10 5958423 5958721 -134358044 - AluJb SINE Alu -2 310 12 2203 123 7 10 chr10 5958833 5959143 -134357622 + AluSx SINE Alu 3 311 -1 262 278 0 14 chr10 5959360 5959432 -134357333 - AluY SINE Alu -17 284 214 1757 102 0 0 chr10 5959854 5960080 -134356685 + AluSq SINE Alu 74 299 -14 1764 106 75 4 chr10 5960188 5960443 -134356322 - AluSx SINE Alu -35 277 5 2177 85 14 7 chr10 5960811 5961117 -134355648 + AluY SINE Alu 1 308 0 182 292 42 14 chr10 5961521 5961593 -134355172 + L2 LINE L2 2735 2808 -506 3989 210 97 16 chr10 5962493 5963597 -134353168 + L1MC4 LINE L1 6469 7661 -381 414 228 350 5 chr10 5963638 5963844 -134352921 + L1MC4 LINE L1 7763 8039 -3 2169 119 3 0 chr10 5968679 5968973 -134347792 - AluSx SINE Alu -17 295 1 181 281 18 0 chr10 5969237 5969294 -134347471 + L3b LINE CR1 1315 1372 -211 1537 119 14 0 chr10 5969546 5969765 -134347000 + AluSx SINE Alu 5 226 -86 1997 122 0 4 chr10 5969867 5970146 -134346619 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5970147 5970177 -134346588 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 596 269 75 21 chr10 5970919 5971105 -134345660 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5971514 5971542 -134345223 + AT_rich Low_complexity Low_complexity 1 28 0 298 325 35 9 chr10 5972540 5972654 -134344111 - MIR3 SINE MIR -45 163 47 304 254 5 42 chr10 5973237 5973337 -134343428 + MER5A DNA MER1_type 13 98 -80 378 228 8 63 chr10 5973379 5973506 -134343259 - MIR SINE MIR -141 121 2 184 250 42 0 chr10 5975226 5975274 -134341491 - L2 LINE L2 -80 3233 3184 2096 105 0 28 chr10 5977205 5977514 -134339251 + AluSc SINE Alu 1 301 0 1392 119 0 99 chr10 5977916 5978039 -134338726 + AluJb SINE Alu 1 88 -224 2354 75 3 0 chr10 5978039 5978332 -134338433 - AluSg SINE Alu -16 294 1 1392 119 0 99 chr10 5978332 5978461 -134338304 + AluJb SINE Alu 88 228 -84 1279 169 139 4 chr10 5979477 5979743 -134337022 + AluJo SINE Alu 1 302 0 575 262 120 43 chr10 5980885 5980955 -134335810 - MER112 DNA MER1_type -9 251 188 2008 125 31 0 chr10 5980955 5981244 -134335521 - AluSx SINE Alu -14 298 1 575 262 120 43 chr10 5981244 5981406 -134335359 - MER112 DNA MER1_type -72 188 1 1500 154 85 24 chr10 5981632 5981925 -134334840 + AluJo SINE Alu 1 311 -1 503 271 8 0 chr10 5982028 5982150 -134334615 - MER58B DNA MER1_type -3 338 216 1844 153 11 3 chr10 5982941 5983223 -134333542 - AluSx SINE Alu -28 284 1 829 150 8 0 chr10 5984917 5985050 -134331715 - AluJb SINE Alu -177 135 2 2097 119 3 0 chr10 5985096 5985403 -134331362 - AluSx SINE Alu 0 312 1 230 229 193 0 chr10 5985596 5985679 -134331086 + MIR SINE MIR 78 176 -86 1836 104 93 11 chr10 5985835 5986114 -134330651 - AluSc SINE Alu -7 302 1 1772 158 14 10 chr10 5986231 5986528 -134330237 - AluJb SINE Alu -12 300 3 303 241 76 0 chr10 5986541 5986620 -134330145 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5986629 5986659 -134330106 + AT_rich Low_complexity Low_complexity 1 30 0 370 168 118 42 chr10 5986774 5986893 -134329872 - MER106A DNA MER1_type -1 235 108 407 287 10 0 chr10 5987078 5987179 -134329586 - L2 LINE L2 -954 2360 2259 283 313 47 7 chr10 5987187 5987337 -134329428 - L2 LINE L2 -1261 2053 1898 1562 182 0 47 chr10 5988689 5988985 -134327780 - AluJo SINE Alu -30 282 1 2413 76 26 0 chr10 5989049 5989352 -134327413 - AluY SINE Alu 0 311 1 1627 134 35 29 chr10 5989352 5989712 -134327053 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5989721 5989748 -134327017 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5989773 5989860 -134326905 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5989878 5989925 -134326840 + AT_rich Low_complexity Low_complexity 1 47 0 2508 58 0 16 chr10 5991115 5991426 -134325339 + AluY SINE Alu 2 307 -4 783 157 3 13 chr10 5991564 5991714 -134325051 + L1P3 LINE L1 5668 5805 -349 1529 159 34 102 chr10 5991715 5991983 -134324782 + MER7A DNA MER2_type 21 259 -2779 1992 130 0 0 chr10 5991983 5992259 -134324506 + AluSc SINE Alu 1 276 -33 1529 159 34 102 chr10 5992259 5992342 -134324423 + MER7A DNA MER2_type 259 346 0 1559 154 113 18 chr10 5992342 5992679 -134324086 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5992681 5992702 -134324063 + AT_rich Low_complexity Low_complexity 1 21 0 416 235 114 8 chr10 5993129 5993261 -134323504 - MIR SINE MIR -12 250 105 855 130 0 71 chr10 5993854 5994008 -134322757 - FLAM_C SINE Alu 0 143 1 1594 212 0 0 chr10 5998922 5999233 -134317532 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5999233 5999398 -134317367 + GA-rich Low_complexity Low_complexity 1 163 0 282 259 12 25 chr10 6000046 6000127 -134316638 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 6000148 6000197 -134316568 + (TG)n Simple_repeat Simple_repeat 1 49 0 553 235 29 7 chr10 6000264 6000400 -134316365 + MLT1L LTR MaLR 129 267 -348 376 232 173 36 chr10 6000467 6000642 -134316123 + MLT1L LTR MaLR 296 611 -4 2063 132 0 3 chr10 6000897 6001192 -134315573 - AluSx SINE Alu -18 294 1 275 277 131 58 chr10 6001210 6001470 -134315295 - HAL1 LINE L1 -377 2130 1852 2787 195 133 36 chr10 6001518 6002915 -134313850 + L1ME2 LINE L1 4567 6155 -9 741 346 97 67 chr10 6003099 6003670 -134313095 + L1M4 LINE L1 2933 3486 -2660 2025 120 0 10 chr10 6003670 6003969 -134312796 - AluSx SINE Alu -11 301 6 741 346 97 67 chr10 6003969 6004228 -134312537 + L1M4 LINE L1 3486 3736 -2410 2566 30 10 0 chr10 6004228 6004526 -134312239 + AluY SINE Alu 1 301 -10 741 346 97 67 chr10 6004526 6004870 -134311895 + L1M4 LINE L1 3736 4143 -2003 409 248 223 45 chr10 6004892 6005251 -134311514 - HAL1b LINE L1 -702 646 224 234 0 0 0 chr10 6005368 6005394 -134311371 + (A)n Simple_repeat Simple_repeat 1 26 0 9703 149 36 24 chr10 6005404 6007185 -134309580 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 6007185 6007217 -134309548 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9703 149 36 24 chr10 6007217 6008207 -134308558 + L1MA4 LINE L1 5321 6298 -2 3516 174 20 36 chr10 6008501 6009250 -134307515 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 6009250 6009279 -134307486 + AT_rich Low_complexity Low_complexity 1 29 0 840 224 97 0 chr10 6009310 6009506 -134307259 - MER58A DNA MER1_type -4 220 6 591 270 70 62 chr10 6009603 6009956 -134306809 - MLT1H LTR MaLR -4 545 72 601 136 9 9 chr10 6010002 6010112 -134306653 + L1MB7 LINE L1 6058 6167 -17 1776 278 149 47 chr10 6010904 6011375 -134305390 - HAL1 LINE L1 -1139 1368 947 1842 159 10 3 chr10 6011375 6011671 -134305094 + AluJo SINE Alu 1 298 -14 1776 278 149 47 chr10 6011671 6012396 -134304369 - HAL1 LINE L1 -1560 947 49 375 276 36 66 chr10 6012688 6012884 -134303881 + L2 LINE L2 3124 3313 0 480 297 62 15 chr10 6012901 6013174 -134303591 + L1 LINE L1 3587 3872 -2274 535 234 131 11 chr10 6013504 6013679 -134303086 + L2 LINE L2 3118 3313 0 441 354 103 37 chr10 6013691 6014213 -134302552 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 6015235 6015256 -134301509 + GC_rich Low_complexity Low_complexity 1 21 0 1634 145 104 0 chr10 6015865 6016134 -134300631 - AluSx SINE Alu -15 297 1 2313 87 3 3 chr10 6016821 6017119 -134299646 - AluSc SINE Alu -11 298 1 376 276 99 29 chr10 6017777 6018020 -134298745 + L1M4 LINE L1 3135 3394 -2752 23 54 0 0 chr10 6018273 6018310 -134298455 + AT_rich Low_complexity Low_complexity 1 37 0 591 244 119 54 chr10 6018354 6018415 -134298350 + L1MC/D LINE L1 1331 1387 -4869 2364 81 0 0 chr10 6018415 6018710 -134298055 - AluSg SINE Alu -15 295 1 591 244 119 54 chr10 6018710 6019000 -134297765 + L1MC/D LINE L1 1387 1705 -4551 1602 180 14 0 chr10 6019027 6019305 -134297460 - AluJo SINE Alu -30 282 1 2372 166 127 50 chr10 6019306 6019516 -134297249 + Charlie1 DNA MER1_type 2049 2241 -520 1454 156 20 60 chr10 6019516 6019817 -134296948 + AluJo SINE Alu 24 312 0 2372 166 127 50 chr10 6019817 6020208 -134296557 + Charlie1 DNA MER1_type 2241 2708 -53 1900 130 7 0 chr10 6020208 6020492 -134296273 - AluSx SINE Alu -26 286 1 2372 166 127 50 chr10 6020492 6020550 -134296215 + Charlie1 DNA MER1_type 2708 2760 -1 340 231 134 8 chr10 6020551 6020685 -134296080 + L1ME3A LINE L1 5825 5975 -195 407 242 173 60 chr10 6020938 6021186 -134295579 + L1MC/D LINE L1 4554 4829 -1386 * 518 297 144 57 chr10 6021154 6021625 -134295140 + L1MC/D LINE L1 5351 5862 -2015 4014 118 92 18 chr10 6023757 6024488 -134292277 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1258 182 19 0 chr10 6024521 6024730 -134292035 - Tigger3(Golem) DNA MER2_type -2816 213 1 562 316 81 42 chr10 6024801 6025231 -134291534 - L2 LINE L2 0 3313 2867 1064 233 124 78 chr10 6025233 6025770 -134290995 - L1ME3A LINE L1 -15 6155 5593 427 209 234 13 chr10 6026174 6026332 -134290433 - L1ME3A LINE L1 -551 5611 5419 2004 109 0 39 chr10 6026379 6026690 -134290075 - AluSq SINE Alu -14 299 1 3256 213 81 48 chr10 6026693 6027890 -134288875 - L1ME3A LINE L1 -1468 4678 3442 814 234 21 0 chr10 6027894 6028184 -134288581 + L1M4b LINE L1 1140 1509 -5350 190 167 119 24 chr10 6028253 6028295 -134288470 + MIR3 SINE MIR 109 154 -54 368 222 123 70 chr10 6028369 6028540 -134288225 - HAL1 LINE L1 -37 2470 2291 799 118 0 9 chr10 6028562 6028672 -134288093 - FLAM_C SINE Alu -25 118 10 243 278 119 16 chr10 6028679 6028805 -134287960 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 6028928 6028959 -134287806 + (CA)n Simple_repeat Simple_repeat 1 31 0 1003 265 92 12 chr10 6029222 6029547 -134287218 + LTR16B LTR ERVL 114 464 0 320 313 23 16 chr10 6029553 6029681 -134287084 + HERV16 LTR ERVL 6 134 -4862 445 329 50 23 chr10 6030470 6030771 -134285994 + HERV16 LTR ERVL 4688 4996 0 1119 303 59 11 chr10 6030771 6031214 -134285551 + LTR16B LTR ERVL 1 464 0 207 288 50 0 chr10 6031256 6031336 -134285429 + MER5A DNA MER1_type 8 91 -98 1629 145 0 0 chr10 6031338 6031587 -134285178 - AluSx SINE Alu -14 298 50 819 167 18 18 chr10 6031796 6031964 -134284801 + L1 LINE L1 4549 4716 -1430 1657 144 0 62 chr10 6031966 6032271 -134284494 + AluJb SINE Alu 14 299 -13 1980 113 50 0 chr10 6032273 6032556 -134284209 + AluSc SINE Alu 1 297 -12 661 156 16 0 chr10 6032556 6032684 -134284081 + L1MA5 LINE L1 6171 6300 0 898 58 0 17 chr10 6032843 6032987 -134283778 - AluY SINE Alu 0 311 171 925 280 8 23 chr10 6033037 6033294 -134283471 + MIR SINE MIR 4 256 -6 620 186 114 41 chr10 6033315 6033543 -134283222 + L1MC5 LINE L1 7259 7415 -393 896 173 11 32 chr10 6033571 6033623 -134283142 + FAM SINE Alu 1 4294967213 -268 1946 95 206 46 chr10 6033623 6033944 -134282821 + MSTA LTR MaLR 1 390 -38 2291 63 0 35 chr10 6033944 6034259 -134282506 - AluY SINE Alu -7 304 1 1946 95 206 46 chr10 6034259 6034306 -134282459 + MSTA LTR MaLR 390 428 0 896 173 11 32 chr10 6034306 6034438 -134282327 + FAM SINE Alu -84 49 0 571 219 26 0 chr10 6034473 6034624 -134282141 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 6034629 6034704 -134282061 + AT_rich Low_complexity Low_complexity 1 75 0 1969 248 38 16 chr10 6034721 6035351 -134281414 + L1M4 LINE L1 2371 3014 -3132 295 287 59 20 chr10 6035368 6035469 -134281296 - MLT2F LTR ERVL -284 379 275 4027 267 109 55 chr10 6035513 6036163 -134280602 - ERVL LTR ERVL -2715 3049 2435 2186 83 0 0 chr10 6036163 6036452 -134280313 - AluSc SINE Alu 0 309 21 4027 267 109 55 chr10 6036452 6037485 -134279280 - ERVL LTR ERVL -3329 2435 1276 933 309 28 32 chr10 6037586 6038279 -134278486 - ERVL LTR ERVL -4646 1118 352 639 154 106 24 chr10 6038410 6038533 -134278232 - FLAM_A SINE Alu 0 133 1 1236 149 0 14 chr10 6039121 6039335 -134277430 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 6039870 6039915 -134276850 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 6040489 6040514 -134276251 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 6041312 6041399 -134275366 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2005 136 0 0 chr10 6041686 6041987 -134274778 - AluSx SINE Alu -10 302 2 1993 227 203 14 chr10 6041998 6042239 -134274526 - L1MD3 LINE L1 0 8039 7845 1928 146 0 3 chr10 6042239 6042541 -134274224 - AluJb SINE Alu -11 301 1 1993 227 203 14 chr10 6042541 6043106 -134273659 - L1MD3 LINE L1 -194 7845 7077 2174 107 3 7 chr10 6045071 6045379 -134271386 + AluSc SINE Alu 1 307 -2 2195 77 0 42 chr10 6045934 6046247 -134270518 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 6046304 6046327 -134270438 + AT_rich Low_complexity Low_complexity 1 23 0 186 254 16 48 chr10 6046504 6046567 -134270198 - L2 LINE L2 -1065 2249 2189 198 326 45 45 chr10 6047106 6047195 -134269570 - L2 LINE L2 -661 2653 2565 237 167 0 0 chr10 6047767 6047821 -134268944 + (TA)n Simple_repeat Simple_repeat 2 55 0 1488 156 0 0 chr10 6047843 6048080 -134268685 - AluSx SINE Alu -75 237 1 336 185 62 0 chr10 6048296 6048377 -134268388 + L1M4 LINE L1 5606 5691 -493 2106 122 0 0 chr10 6049615 6049918 -134266847 + AluSq SINE Alu 7 309 -4 1074 126 0 0 chr10 6049918 6050106 -134266659 + AluSg/x SINE Alu 132 319 0 454 271 99 48 chr10 6050109 6050401 -134266364 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 6051522 6051587 -134265178 + CT-rich Low_complexity Low_complexity 4 67 0 235 274 59 39 chr10 6051976 6052078 -134264687 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 6052177 6052234 -134264531 + C-rich Low_complexity Low_complexity 5 61 0 1971 96 3 41 chr10 6052238 6052529 -134264236 - AluSx SINE Alu -32 280 1 1978 116 10 13 chr10 6052968 6053279 -134263486 + AluJb SINE Alu 1 310 -2 245 211 0 0 chr10 6053751 6053803 -134262962 + MER63 DNA MER1_type 696 747 -89 4327 148 81 44 chr10 6056102 6056394 -134260371 - L1MB2 LINE L1 -2 6169 5889 1496 134 181 0 chr10 6056394 6056648 -134260117 - AluSg SINE Alu 0 300 1 4327 148 81 44 chr10 6056648 6056660 -134260105 - L1MB2 LINE L1 -282 5889 5879 1933 113 3 36 chr10 6056660 6056969 -134259796 - AluSx SINE Alu -13 299 1 4327 148 81 44 chr10 6056969 6057636 -134259129 - L1MB2 LINE L1 -292 5879 5157 1295 222 68 20 chr10 6057800 6058151 -134258614 - MER87 LTR ERV1 0 541 174 2211 77 0 3 chr10 6058280 6058567 -134258198 - AluSg SINE Alu -14 296 11 217 234 11 117 chr10 6058609 6058703 -134258062 - L2 LINE L2 0 3272 3189 571 276 81 57 chr10 6059357 6059603 -134257162 - MIR SINE MIR -3 259 8 2067 109 0 16 chr10 6059716 6060020 -134256745 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 6060674 6060700 -134256065 + (A)n Simple_repeat Simple_repeat 1 26 0 1166 210 12 12 chr10 6060702 6060853 -134255912 + L1 LINE L1 4015 4169 -1977 2159 96 0 0 chr10 6060853 6061177 -134255588 + AluSx SINE Alu 1 324 0 1166 210 12 12 chr10 6061177 6061267 -134255498 + L1 LINE L1 4168 4257 -1889 284 244 167 40 chr10 6062324 6062513 -134254252 + MER63 DNA MER1_type 1 1688 0 324 0 0 0 chr10 6062772 6062808 -134253957 + (TG)n Simple_repeat Simple_repeat 1 36 0 2046 134 3 0 chr10 6062912 6063217 -134253548 - AluJb SINE Alu -6 306 1 2008 112 7 17 chr10 6065110 6065406 -134251359 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 6066345 6066524 -134250241 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 6066696 6066875 -134249890 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 6066801 6066972 -134249793 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 192 311 283 17 chr10 6067121 6067301 -134249464 + MIR SINE MIR 35 262 0 743 176 8 0 chr10 6067681 6067812 -134248953 + FLAM_C SINE Alu 2 133 -10 354 278 51 77 chr10 6068205 6068478 -134248287 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 6069617 6069699 -134247066 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 6069937 6070001 -134246764 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2252 122 0 0 chr10 6070100 6070403 -134246362 - AluSx SINE Alu -9 303 1 1701 159 7 11 chr10 6070449 6070726 -134246039 - AluJb SINE Alu -36 276 1 1724 86 9 0 chr10 6072063 6072285 -134244480 + AluSg/x SINE Alu 68 291 -19 27 0 0 0 chr10 6072341 6072368 -134244397 + AT_rich Low_complexity Low_complexity 1 27 0 2151 97 0 72 chr10 6073542 6073862 -134242903 + AluSx SINE Alu 6 302 -10 445 103 0 0 chr10 6075493 6075551 -134241214 + AluSq/x SINE Alu 62 119 -194 2441 70 0 19 chr10 6076510 6076822 -134239943 - AluY SINE Alu -5 306 1 1916 163 7 0 chr10 6076869 6077169 -134239596 + AluSx SINE Alu 1 302 -10 471 283 60 57 chr10 6077356 6077443 -134239322 + L1ME3A LINE L1 5209 5294 -876 749 172 31 0 chr10 6077443 6077571 -134239194 + FLAM_C SINE Alu 1 132 -1 471 283 60 57 chr10 6077571 6078152 -134238613 + L1ME3A LINE L1 5294 5891 -279 1008 98 0 0 chr10 6078341 6078474 -134238291 + FLAM_C SINE Alu 1 133 0 1445 177 58 50 chr10 6080177 6080332 -134236433 + MLT1A1 LTR MaLR 1 153 -212 2093 130 3 0 chr10 6080332 6080625 -134236140 + AluSq SINE Alu 1 294 -19 1445 177 58 50 chr10 6080625 6080791 -134235974 + MLT1A1 LTR MaLR 153 328 -37 1465 182 91 0 chr10 6080791 6081066 -134235699 - AluJo SINE Alu -12 300 1 1445 177 58 50 chr10 6081066 6081105 -134235660 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 6083024 6083126 -134233639 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1844 170 0 0 chr10 6083126 6083414 -134233351 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 6083414 6083578 -134233187 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1682 173 46 41 chr10 6084283 6084671 -134232094 - MLT1B LTR MaLR 0 390 1 297 0 0 0 chr10 6085094 6085127 -134231638 + (T)n Simple_repeat Simple_repeat 1 33 0 774 256 50 6 chr10 6085197 6085377 -134231388 - MER58A DNA MER1_type -33 191 4 355 240 0 13 chr10 6085433 6085508 -134231257 - MLT1J LTR MaLR -202 309 236 1428 244 35 32 chr10 6086719 6087092 -134229673 + MLT1B LTR MaLR 1 374 -16 1726 187 3 7 chr10 6087179 6087478 -134229287 - AluJo SINE Alu -13 299 2 2588 50 0 3 chr10 6087574 6087875 -134228890 + AluY SINE Alu 1 300 -11 199 311 33 16 chr10 6088178 6088300 -134228465 + L2 LINE L2 3143 3266 -6 989 182 56 33 chr10 6088800 6088837 -134227928 + MER58A DNA MER1_type 1 36 -2384 2184 113 0 0 chr10 6088837 6089177 -134227588 - AluSq SINE Alu 0 342 3 989 182 56 33 chr10 6089177 6089352 -134227413 + MER58A DNA MER1_type 36 219 -5 2297 116 0 0 chr10 6089426 6089719 -134227046 - AluSx SINE Alu -19 293 1 3103 277 71 12 chr10 6089783 6091070 -134225695 + L1MEc LINE L1 1122 2483 -3913 450 250 127 26 chr10 6091070 6091157 -134225608 + L1M4 LINE L1 4204 4281 -1865 717 45 0 0 chr10 6091157 6091246 -134225519 + (TA)n Simple_repeat Simple_repeat 1 89 0 450 250 127 26 chr10 6091246 6091426 -134225339 + L1M4 LINE L1 4281 4498 -1648 6367 52 3 1 chr10 6091543 6092327 -134224438 + L1PA3 LINE L1 5371 6155 0 180 77 0 0 chr10 6092337 6092363 -134224402 + (A)n Simple_repeat Simple_repeat 1 26 0 1109 166 4 4 chr10 6092363 6093723 -134223042 - ALR/Alpha Satellite centromeric 0 1360 1 2195 113 0 0 chr10 6093907 6094217 -134222548 - AluSx SINE Alu 0 310 1 22 35 0 0 chr10 6094320 6094349 -134222416 + AT_rich Low_complexity Low_complexity 1 29 0 721 163 8 16 chr10 6094607 6094730 -134222035 - FLAM_C SINE Alu -10 123 2 773 266 55 44 chr10 6094928 6095203 -134221562 + MLT1J LTR MaLR 200 477 -34 858 126 0 15 chr10 6095227 6095362 -134221403 - FLAM_C SINE Alu 0 133 1 859 209 6 17 chr10 6096082 6096254 -134220511 - MER45A DNA AcHobo -8 170 1 516 219 116 0 chr10 6096262 6096585 -134220180 + L1MCc LINE L1 1198 1571 -4851 373 167 154 0 chr10 6096589 6096667 -134220098 + MLT1B LTR MaLR 1 90 -300 3613 226 46 82 chr10 6096683 6097905 -134218860 + L1MCc LINE L1 1732 2808 -4133 2145 151 0 0 chr10 6097905 6098217 -134218548 + AluSx SINE Alu 1 312 0 3613 226 46 82 chr10 6098217 6099411 -134217354 + L1MCc LINE L1 2808 4043 -2898 607 188 257 10 chr10 6099582 6099732 -134217033 - MER69 DNA AcHobo -92 2434 2322 1793 160 0 53 chr10 6099732 6100052 -134216713 - AluSx SINE Alu 0 304 1 607 188 257 10 chr10 6100052 6100102 -134216663 - MER69 DNA AcHobo -204 2322 2183 453 258 113 32 chr10 6100649 6100835 -134215930 + LTR33A LTR ERVL 297 497 -26 2061 138 10 0 chr10 6100841 6101132 -134215633 - AluSx SINE Alu -18 294 1 273 216 69 78 chr10 6102246 6102348 -134214417 + HsTC2 DNA Tc2 1793 1893 -5 1011 235 81 59 chr10 6102396 6102721 -134214044 - L1ME2 LINE L1 -63 6101 5764 1987 152 0 26 chr10 6102721 6103023 -134213742 + AluSx SINE Alu 1 294 -18 1011 235 81 59 chr10 6103023 6103105 -134213660 - L1ME2 LINE L1 -400 5764 5685 291 93 0 0 chr10 6103105 6103148 -134213617 + (TA)n Simple_repeat Simple_repeat 1 43 0 2139 125 20 0 chr10 6103329 6103633 -134213132 - AluSx SINE Alu -2 310 1 412 179 12 0 chr10 6103674 6103758 -134213007 + L1PA16 LINE L1 6080 6164 -2 414 0 0 0 chr10 6105480 6105526 -134211239 + (TG)n Simple_repeat Simple_repeat 2 47 0 225 0 0 0 chr10 6105577 6105602 -134211163 + (TG)n Simple_repeat Simple_repeat 2 26 0 297 0 0 0 chr10 6105664 6105697 -134211068 + (TG)n Simple_repeat Simple_repeat 2 34 0 384 22 0 0 chr10 6105746 6105791 -134210974 + (TG)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr10 6105853 6105888 -134210877 + (TG)n Simple_repeat Simple_repeat 2 36 0 429 20 0 0 chr10 6105937 6105987 -134210778 + (TG)n Simple_repeat Simple_repeat 1 50 0 227 190 52 0 chr10 6106121 6106179 -134210586 - LTR33A LTR ERVL -4 519 459 421 232 62 9 chr10 6106185 6106297 -134210468 - L1MA10 LINE L1 -7 6327 6210 379 225 15 36 chr10 6106295 6106405 -134210360 - L1ME1 LINE L1 -148 6016 5894 * 1069 202 50 60 chr10 6106410 6106464 -134210301 - MLT1C LTR MaLR -183 284 231 1726 177 3 10 chr10 6106464 6106763 -134210002 + AluSx SINE Alu 1 297 -15 1069 202 50 60 chr10 6106763 6106990 -134209775 - MLT1C LTR MaLR -236 231 6 780 228 95 30 chr10 6107007 6107200 -134209565 - L1MCa LINE L1 -4678 1929 1713 2151 135 3 0 chr10 6107200 6107497 -134209268 - AluSx SINE Alu -14 298 1 780 228 95 30 chr10 6107497 6107566 -134209199 - L1MCa LINE L1 -4894 1713 1650 261 301 126 79 chr10 6107568 6107910 -134208855 + MLT1K LTR MaLR 134 491 -97 1897 171 14 26 chr10 6107953 6108181 -134208584 - MER7A DNA MER2_type -2692 346 123 1984 133 7 0 chr10 6108181 6108484 -134208281 - AluSx SINE Alu 0 305 1 1897 171 14 26 chr10 6108484 6108605 -134208160 - MER7A DNA MER2_type -2915 123 2 324 61 0 61 chr10 6109175 6109224 -134207541 - MSTB1 LTR MaLR 0 457 412 1112 73 11 17 chr10 6109224 6109403 -134207362 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 219 69 0 0 chr10 6109423 6109452 -134207313 + (TC)n Simple_repeat Simple_repeat 1 29 0 1185 82 19 0 chr10 6109452 6109610 -134207155 - AluSc SINE Alu -15 294 134 2000 175 34 11 chr10 6109611 6109984 -134206781 - MSTB1 LTR MaLR -38 394 10 4321 85 2 0 chr10 6109984 6110537 -134206228 + MER41A LTR ERV1 1 554 0 937 281 82 24 chr10 6110641 6110894 -134205871 - MLT1J LTR MaLR -70 441 153 5234 120 24 31 chr10 6110894 6111772 -134204993 + MER4D LTR ERV1 1 872 0 937 281 82 24 chr10 6111772 6111935 -134204830 - MLT1J LTR MaLR -358 153 1 3263 191 20 30 chr10 6111949 6112648 -134204117 - L1MCa LINE L1 -4972 935 466 1319 162 199 39 chr10 6112648 6113036 -134203729 + LTR7 LTR ERV1 1 450 0 3263 191 20 30 chr10 6113036 6113416 -134203349 - L1MCa LINE L1 -5441 466 84 2642 177 107 35 chr10 6113820 6114182 -134202583 - L1MB5 LINE L1 -1 6163 5829 2101 112 3 32 chr10 6114182 6114495 -134202270 - AluSx SINE Alu -8 304 1 2642 177 107 35 chr10 6114495 6114858 -134201907 - L1MB5 LINE L1 -335 5829 5366 350 175 6 129 chr10 6114884 6114910 -134201855 - Charlie1 DNA MER1_type -39 2722 2694 2310 106 6 0 chr10 6114910 6115221 -134201544 + AluSq SINE Alu 1 313 0 350 175 6 129 chr10 6115221 6115365 -134201400 - Charlie1 DNA MER1_type -67 2694 2573 * 654 233 15 0 chr10 6115363 6115496 -134201269 - Charlie1 DNA MER1_type -2570 191 57 671 225 40 12 chr10 6115951 6116124 -134200641 + MER5A DNA MER1_type 1 178 -11 1883 154 7 0 chr10 6116163 6116455 -134200310 - AluJo SINE Alu -18 294 1 213 196 43 0 chr10 6116494 6116540 -134200225 + CT-rich Low_complexity Low_complexity 3 50 0 1245 103 0 0 chr10 6117587 6117742 -134199023 - AluSg SINE Alu -155 155 1 1049 140 45 30 chr10 6117842 6118042 -134198723 + MER3 DNA MER1_type 1 203 -6 1728 197 64 33 chr10 6118138 6118447 -134198318 + MER63B DNA MER1_type 1 328 -734 1578 185 49 3 chr10 6118447 6118733 -134198032 - AluJo SINE Alu -13 299 1 1728 197 64 33 chr10 6118733 6118844 -134197921 + MER63B DNA MER1_type 328 434 -2 2203 124 0 0 chr10 6119695 6119994 -134196771 - AluSx SINE Alu 0 312 14 775 201 13 0 chr10 6120033 6120192 -134196573 + MER5A DNA MER1_type 1 161 -28 237 211 0 7 chr10 6120192 6120203 -134196562 + MER5A DNA MER1_type 137 147 -42 840 127 0 8 chr10 6120203 6120337 -134196428 - L1MA5A LINE L1 -5 6292 6160 237 211 0 7 chr10 6120337 6120380 -134196385 + MER5A DNA MER1_type 147 189 0 204 228 0 70 chr10 6120391 6120448 -134196317 - MER5B DNA MER1_type -4 174 122 1130 173 138 27 chr10 6120455 6120658 -134196107 + L1MB5 LINE L1 5886 6126 -48 1735 158 69 91 chr10 6120658 6121063 -134195702 + MSTD LTR MaLR 1 396 0 1130 173 138 27 chr10 6121063 6121119 -134195646 + L1MB5 LINE L1 6126 6174 0 186 167 28 0 chr10 6121123 6121159 -134195606 - MER5B DNA MER1_type -54 124 88 2142 90 3 3 chr10 6121186 6121476 -134195289 - AluSq SINE Alu -12 301 12 2088 115 0 7 chr10 6122187 6122491 -134194274 - AluSx SINE Alu -9 303 2 798 172 0 0 chr10 6123446 6123987 -134192778 + (CCAA)n Simple_repeat Simple_repeat 1 541 0 2246 76 14 0 chr10 6125157 6125447 -134191318 - AluSq SINE Alu -19 294 1 210 143 0 0 chr10 6125543 6125578 -134191187 + (TG)n Simple_repeat Simple_repeat 1 35 0 234 242 12 121 chr10 6125891 6126047 -134190718 - MIR3 SINE MIR -28 180 40 183 302 16 0 chr10 6126422 6126485 -134190280 - L2 LINE L2 0 3313 3250 287 292 144 26 chr10 6127686 6127844 -134188921 + MIR SINE MIR 43 212 -50 1975 127 3 19 chr10 6127935 6128250 -134188515 - AluSx SINE Alu -2 310 1 188 289 103 21 chr10 6129035 6129132 -134187633 - L2 LINE L2 0 3313 3209 180 188 0 59 chr10 6129193 6129294 -134187471 + (TATG)n Simple_repeat Simple_repeat 4 98 0 1015 146 0 12 chr10 6129565 6129729 -134187036 + AluJb SINE Alu 1 162 -150 1581 146 8 0 chr10 6129729 6129982 -134186783 + AluSx SINE Alu 44 298 -14 2099 114 0 7 chr10 6129988 6130287 -134186478 + AluSx SINE Alu 1 297 -15 2014 114 0 14 chr10 6131654 6131951 -134184814 + AluSx SINE Alu 1 293 -19 215 339 148 17 chr10 6132102 6132314 -134184451 + MIR3 SINE MIR 15 256 -6 571 265 38 25 chr10 6132549 6132787 -134183978 + L1ME2 LINE L1 34 274 -6122 354 243 46 99 chr10 6133097 6133334 -134183431 + L1ME2 LINE L1 660 879 -5517 1729 129 42 17 chr10 6133334 6133621 -134183144 + AluSx SINE Alu 5 298 -14 354 243 46 99 chr10 6133621 6133687 -134183078 + L1ME2 LINE L1 879 947 -5449 1426 233 88 67 chr10 6133865 6134342 -134182423 + L1ME2 LINE L1 4794 5296 -937 2350 77 0 3 chr10 6134342 6134653 -134182112 + AluY SINE Alu 1 310 -1 1426 233 88 67 chr10 6134653 6135022 -134181743 + L1ME2 LINE L1 5296 5656 -577 662 143 0 4 chr10 6135026 6135250 -134181515 + AluSx SINE Alu 1 308 -2 1037 254 38 38 chr10 6135275 6135745 -134181020 + L1ME2 LINE L1 5654 6091 -142 361 220 13 0 chr10 6135754 6135842 -134180923 + L1ME2 LINE L1 6144 6223 -10 209 266 101 13 chr10 6138163 6138242 -134178523 - MIR SINE MIR -103 105 20 246 322 44 0 chr10 6138850 6138940 -134177825 - MER5A DNA MER1_type -87 102 9 591 232 137 42 chr10 6139961 6140129 -134176636 - MIR3 SINE MIR -5 203 20 554 272 125 0 chr10 6140325 6140509 -134176256 - MIR SINE MIR 0 262 56 465 263 90 75 chr10 6140911 6141497 -134175268 + L1M4 LINE L1 2128 2722 -3424 462 338 61 19 chr10 6142702 6142915 -134173850 + L1M4 LINE L1 4166 4387 -1759 2288 70 10 3 chr10 6143045 6143346 -134173419 - AluY SINE Alu -8 303 1 420 269 82 68 chr10 6143369 6143608 -134173157 + L1ME3A LINE L1 2371 2614 -3926 225 264 81 34 chr10 6143639 6143787 -134172978 + L1ME3A LINE L1 2628 2782 -3758 428 309 77 47 chr10 6144060 6144555 -134172210 + L1ME3A LINE L1 4139 4648 -1892 * 868 277 79 38 chr10 6144551 6145235 -134171530 + L1ME3A LINE L1 5632 6337 -227 2042 132 3 0 chr10 6145358 6145668 -134171097 - AluSx SINE Alu 0 312 2 28 0 0 0 chr10 6145794 6145822 -134170943 + AT_rich Low_complexity Low_complexity 1 28 0 2422 175 24 37 chr10 6146107 6146599 -134170166 - MER66B LTR ERV1 0 486 1 367 259 54 9 chr10 6148744 6148856 -134167909 + Charlie8 DNA MER1_type 1090 1206 -1211 189 292 62 0 chr10 6148952 6149000 -134167765 - MIR3 SINE MIR -1 207 157 34 24 0 0 chr10 6149583 6149624 -134167141 + AT_rich Low_complexity Low_complexity 1 41 0 268 173 27 55 chr10 6149693 6149803 -134166962 + (TATAA)n Simple_repeat Simple_repeat 5 111 0 618 263 26 7 chr10 6149831 6149983 -134166782 - MIR SINE MIR -94 168 14 354 280 92 48 chr10 6150118 6150389 -134166376 - L2 LINE L2 -734 2580 2298 319 321 136 0 chr10 6150430 6150570 -134166195 - MIR SINE MIR -11 251 93 2667 149 22 65 chr10 6150911 6151447 -134165318 - MLT2B2 LTR ERVL 0 515 3 290 262 78 10 chr10 6152180 6152283 -134164482 + MIR SINE MIR 38 147 -115 1965 101 7 30 chr10 6152286 6152583 -134164182 + AluSx SINE Alu 1 290 -22 216 0 0 0 chr10 6153427 6153451 -134163314 + (TA)n Simple_repeat Simple_repeat 2 25 0 2199 84 7 3 chr10 6153451 6153750 -134163015 - AluSx SINE Alu -11 301 2 234 0 0 0 chr10 6153750 6153776 -134162989 + (TA)n Simple_repeat Simple_repeat 1 26 0 395 213 117 0 chr10 6154316 6154410 -134162355 + L2 LINE L2 3168 3272 0 372 330 92 42 chr10 6155100 6155339 -134161426 + MIR SINE MIR 2 252 -10 23 33 0 0 chr10 6155579 6155609 -134161156 + AT_rich Low_complexity Low_complexity 1 30 0 815 128 0 0 chr10 6155609 6155726 -134161039 - FLAM_C SINE Alu -15 118 2 826 163 0 15 chr10 6156794 6156929 -134159836 - FLAM_C SINE Alu 0 133 1 299 269 186 26 chr10 6157006 6157162 -134159603 + MER5A DNA MER1_type 9 189 0 354 349 34 34 chr10 6157229 6157404 -134159361 - MER5B DNA MER1_type -2 176 2 194 342 53 13 chr10 6157646 6157722 -134159043 + L2 LINE L2 3132 3210 -62 1635 164 10 7 chr10 6157904 6158197 -134158568 + AluSx SINE Alu 1 294 -18 299 244 61 0 chr10 6158917 6158999 -134157766 - MIR3 SINE MIR 0 208 122 2255 95 0 3 chr10 6159278 6159582 -134157183 + AluSx SINE Alu 1 303 -9 184 293 338 6 chr10 6160751 6160908 -134155857 + MIR SINE MIR 48 256 -6 239 327 243 22 chr10 6161109 6161381 -134155384 + L2 LINE L2 2878 3209 -63 753 146 8 0 chr10 6161660 6161783 -134154982 + L1PB1 LINE L1 5957 6080 -71 872 81 16 0 chr10 6161783 6161903 -134154862 + L1PB1 LINE L1 6023 6148 -3 2058 129 0 7 chr10 6161909 6162218 -134154547 + AluSg SINE Alu 1 307 -3 1600 154 35 3 chr10 6162541 6162826 -134153939 + AluJb SINE Alu 1 294 -18 225 208 21 0 chr10 6162867 6162915 -134153850 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr10 6163841 6163862 -134152903 + (T)n Simple_repeat Simple_repeat 1 21 0 825 142 0 8 chr10 6164620 6164754 -134152011 + AluSq/x SINE Alu 1 133 -180 21 0 0 0 chr10 6164754 6164775 -134151990 + AT_rich Low_complexity Low_complexity 1 21 0 2065 107 0 3 chr10 6164775 6165064 -134151701 + AluSx SINE Alu 1 288 -24 26 64 0 0 chr10 6165276 6165323 -134151442 + AT_rich Low_complexity Low_complexity 1 47 0 1741 102 8 0 chr10 6165323 6165559 -134151206 - AluSx SINE Alu -59 253 16 4196 78 18 12 chr10 6166041 6166608 -134150157 - L1PA8A LINE L1 0 6131 5562 201 74 0 0 chr10 6166720 6166747 -134150018 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1493 172 0 12 chr10 6166759 6167015 -134149750 - AluJb SINE Alu -58 254 2 207 0 0 0 chr10 6167321 6167344 -134149421 + (T)n Simple_repeat Simple_repeat 1 23 0 2105 115 0 0 chr10 6168535 6168830 -134147935 + AluSq SINE Alu 1 295 -18 1071 144 0 6 chr10 6169600 6169767 -134146998 + FRAM SINE Alu 1 166 0 2088 104 24 0 chr10 6171610 6171897 -134144868 - AluSx SINE Alu -18 294 1 295 393 13 13 chr10 6172322 6172546 -134144219 - MIR SINE MIR -3 259 36 238 83 0 42 chr10 6173021 6173069 -134143696 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1730 161 7 13 chr10 6173666 6173970 -134142795 + AluJo SINE Alu 1 302 -10 3436 101 12 45 chr10 6174605 6174779 -134141986 - L1MA5A LINE L1 -1 6296 6118 2225 115 0 3 chr10 6174779 6175084 -134141681 - AluSx SINE Alu -3 309 6 3436 101 12 45 chr10 6175084 6175483 -134141282 - L1MA5A LINE L1 -179 6118 5742 1922 137 20 10 chr10 6175558 6175857 -134140908 - AluJb SINE Alu -10 302 1 219 189 0 0 chr10 6175928 6175965 -134140800 - MIR SINE MIR -7 255 219 * 503 267 127 46 chr10 6175933 6176682 -134140083 - L2 LINE L2 -18 3295 2400 186 242 0 16 chr10 6176784 6176846 -134139919 - L2 LINE L2 -1522 1792 1732 981 123 20 27 chr10 6176948 6177094 -134139671 - AluSq/x SINE Alu -167 145 1 455 267 87 20 chr10 6177097 6177247 -134139518 - HERV16 LTR ERVL -3144 1852 1693 * 460 331 138 34 chr10 6177243 6177518 -134139247 + HERV16 LTR ERVL 3612 3857 -1797 1785 145 48 3 chr10 6177518 6177807 -134138958 + AluSq SINE Alu 1 302 -11 460 331 138 34 chr10 6177807 6178059 -134138706 + HERV16 LTR ERVL 3857 4194 -1460 1030 116 0 7 chr10 6178215 6178361 -134138404 + AluSq/x SINE Alu 2 146 -167 535 141 0 0 chr10 6178361 6178439 -134138326 + AluS SINE Alu 223 300 -12 443 254 155 42 chr10 6179124 6179459 -134137306 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6179758 6179856 -134136909 + A-rich Low_complexity Low_complexity 2 97 0 1387 167 17 24 chr10 6180047 6180334 -134136431 - AluSx SINE Alu -27 285 1 358 164 41 82 chr10 6180543 6180689 -134136076 + (CACTC)n Simple_repeat Simple_repeat 4 143 0 2226 113 0 0 chr10 6181170 6181475 -134135290 + AluSx SINE Alu 1 305 0 668 298 121 46 chr10 6181566 6181845 -134134920 + HERV16 LTR ERVL 1957 2268 -2728 2240 115 3 0 chr10 6181845 6182150 -134134615 + AluSx SINE Alu 1 306 -6 668 298 121 46 chr10 6182150 6182216 -134134549 + HERV16 LTR ERVL 2268 2328 -2668 1267 265 7 0 chr10 6182227 6182514 -134134251 - MER58B DNA MER1_type -38 303 15 489 313 138 22 chr10 6182531 6182726 -134134039 + HERV16 LTR ERVL 2323 2494 -2502 2036 118 14 0 chr10 6182726 6183034 -134133731 - AluSp SINE Alu 0 312 1 489 313 138 22 chr10 6183034 6183353 -134133412 + HERV16 LTR ERVL 2494 2900 -2096 963 124 7 0 chr10 6183391 6183528 -134133237 - AluSg/x SINE Alu -17 293 156 458 240 71 19 chr10 6183532 6183686 -134133079 - HERV16 LTR ERVL -4682 314 153 272 339 26 0 chr10 6185004 6185119 -134131646 + MIR SINE MIR 133 250 -12 351 279 26 12 chr10 6185285 6185471 -134131294 + MIR SINE MIR 37 228 -34 1840 158 7 7 chr10 6185960 6186244 -134130521 + AluJb SINE Alu 3 286 -26 2223 121 7 0 chr10 6186484 6186790 -134129975 - AluSx SINE Alu -4 308 1 23 0 0 0 chr10 6186935 6186958 -134129807 + AT_rich Low_complexity Low_complexity 1 23 0 2148 114 0 0 chr10 6187143 6187424 -134129341 + AluSq SINE Alu 1 281 -32 947 97 14 0 chr10 6187424 6187568 -134129197 + (GAAA)n Simple_repeat Simple_repeat 1 146 0 2454 63 0 0 chr10 6187601 6187888 -134128877 + AluSq SINE Alu 18 304 -9 470 267 134 54 chr10 6188836 6189296 -134127469 - L1 LINE L1 -2974 3172 2682 381 253 66 62 chr10 6189417 6189674 -134127091 - L1 LINE L1 -3623 2523 2266 285 167 0 0 chr10 6189887 6189941 -134126824 + (TG)n Simple_repeat Simple_repeat 1 54 0 218 183 134 12 chr10 6190651 6190733 -134126032 - SUBTEL_sa Satellite Satellite -72 102 11 180 176 0 0 chr10 6191142 6191176 -134125589 + CT-rich Low_complexity Low_complexity 2 35 0 307 284 23 11 chr10 6192685 6192773 -134123992 - L1MC4 LINE L1 -1340 6702 6614 2101 130 3 0 chr10 6192776 6193069 -134123696 - AluSx SINE Alu -18 294 1 298 267 67 17 chr10 6193370 6193490 -134123275 - L2 LINE L2 -7 3306 3181 2043 120 10 19 chr10 6194921 6195229 -134121536 - AluSx SINE Alu -7 305 1 1737 153 12 41 chr10 6195411 6195679 -134121086 - MER46B DNA MER2_type -2497 234 102 2429 84 0 13 chr10 6195679 6195988 -134120777 - AluY SINE Alu -6 305 1 1737 153 12 41 chr10 6195988 6196059 -134120706 - MER46B DNA MER2_type -2629 102 30 2139 118 7 3 chr10 6196527 6196831 -134119934 - AluSx SINE Alu -7 305 1 1857 82 106 0 chr10 6198734 6199019 -134117746 + AluY SINE Alu 1 312 0 324 190 110 33 chr10 6199486 6199662 -134117103 + MER106A DNA MER1_type 2 231 -5 557 215 75 45 chr10 6199668 6199868 -134116897 + L1MC5 LINE L1 7712 7917 -44 2096 88 95 0 chr10 6199882 6200166 -134116599 - AluY SINE Alu 0 311 1 1295 158 10 5 chr10 6200749 6200958 -134115807 + MER2 DNA MER2_type 1 210 -135 241 261 185 0 chr10 6200985 6201050 -134115715 + MER2 DNA MER2_type 268 344 -1 2209 102 30 0 chr10 6201094 6201389 -134115376 + AluSx SINE Alu 1 304 -8 360 284 97 92 chr10 6201552 6201885 -134114880 + L1MC4 LINE L1 7293 7632 -410 198 71 0 0 chr10 6201885 6201913 -134114852 + (ATG)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6201913 6202217 -134114548 + L1MC4 LINE L1 7632 7933 -109 352 206 78 20 chr10 6203076 6203178 -134113587 - L1ME LINE L1 -305 5816 5709 1768 169 32 0 chr10 6204126 6204410 -134112355 - AluJb SINE Alu -19 293 1 1072 128 199 0 chr10 6206705 6206901 -134109864 + MER46A DNA MER2_type 2 236 0 2042 133 7 3 chr10 6208502 6208796 -134107969 - AluSx SINE Alu -17 295 1 2217 126 7 0 chr10 6208798 6209100 -134107665 - AluSx SINE Alu -8 304 1 191 323 104 0 chr10 6209555 6209651 -134107114 + MIR SINE MIR 108 213 -49 221 351 43 21 chr10 6210550 6210644 -134106121 - L3b LINE CR1 -10 1573 1478 254 245 64 21 chr10 6210759 6210853 -134105912 + MER5B DNA MER1_type 81 178 0 351 286 31 0 chr10 6212137 6212235 -134104530 - MER3 DNA MER1_type -96 113 13 225 0 0 0 chr10 6212265 6212290 -134104475 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 219 228 140 0 chr10 6212693 6212750 -134104015 + MIR SINE MIR 21 85 -123 2265 115 0 0 chr10 6212758 6213054 -134103711 - AluSx SINE Alu -16 296 1 243 286 143 10 chr10 6216410 6216508 -134100257 + L2 LINE L2 3162 3272 0 198 0 0 0 chr10 6217287 6217309 -134099456 + (A)n Simple_repeat Simple_repeat 1 22 0 35 71 0 0 chr10 6218781 6218851 -134097914 + AT_rich Low_complexity Low_complexity 1 70 0 312 204 66 109 chr10 6218886 6218934 -134097831 + LTR67 LTR ERVL 3 52 -505 2451 63 17 0 chr10 6218934 6219236 -134097529 - AluY SINE Alu -4 307 1 312 204 66 109 chr10 6219236 6219324 -134097441 + LTR67 LTR ERVL 52 133 -424 2728 45 0 0 chr10 6219572 6219882 -134096883 - AluY SINE Alu -1 310 1 1666 176 42 3 chr10 6219885 6220169 -134096596 - AluSx SINE Alu -13 299 5 239 202 165 28 chr10 6220367 6220476 -134096289 - AluJb SINE Alu -174 128 5 279 212 45 0 chr10 6220500 6220566 -134096199 + LTR67 LTR ERVL 487 555 -2 335 175 34 3 chr10 6220744 6220814 -134095951 - AluS SINE Alu -243 57 3 2144 93 20 13 chr10 6220838 6221138 -134095627 + AluSx SINE Alu 1 302 -10 2060 199 52 22 chr10 6221138 6221596 -134095169 - L1MC3 LINE L1 -1707 6078 5607 498 309 69 15 chr10 6222022 6222284 -134094481 + L2 LINE L2 2228 2503 -811 319 214 29 19 chr10 6222715 6222818 -134093947 - HAL1 LINE L1 -96 2411 2308 391 328 34 6 chr10 6222898 6223075 -134093690 + HAL1 LINE L1 1712 1893 -614 306 286 31 0 chr10 6223079 6223177 -134093588 + HAL1 LINE L1 2064 2164 -343 1923 108 41 7 chr10 6223324 6223619 -134093146 - AluSx SINE Alu -7 305 1 624 220 38 6 chr10 6223668 6223827 -134092938 - HAL1 LINE L1 -721 1786 1623 1012 138 25 0 chr10 6223828 6223987 -134092778 - FRAM SINE Alu -6 170 8 863 258 156 36 chr10 6223991 6224246 -134092519 - HAL1 LINE L1 -868 1639 1416 2164 112 3 0 chr10 6224246 6224542 -134092223 - AluSx SINE Alu -15 297 1 863 258 156 36 chr10 6224542 6224704 -134092061 - HAL1 LINE L1 -1091 1416 1172 1568 144 0 4 chr10 6224872 6225108 -134091657 - AluJo SINE Alu -77 235 1 207 105 0 26 chr10 6225889 6225927 -134090838 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 733 158 38 15 chr10 6225929 6226062 -134090703 - FLAM_C SINE Alu -2 141 6 1736 116 0 0 chr10 6226117 6226358 -134090407 + AluSx SINE Alu 58 298 -14 216 0 0 0 chr10 6227245 6227269 -134089496 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2309 74 0 10 chr10 6227273 6227582 -134089183 + AluSc SINE Alu 1 306 -3 322 240 94 0 chr10 6228358 6228454 -134088311 + MLT1J LTR MaLR 379 483 -28 2200 104 3 0 chr10 6228469 6228766 -134087999 + AluSp SINE Alu 2 299 -14 1440 162 19 11 chr10 6228980 6229245 -134087520 - MER1A DNA MER1_type 0 529 263 1694 180 10 10 chr10 6229613 6229913 -134086852 + AluJb SINE Alu 5 304 -8 24 67 0 0 chr10 6231380 6231425 -134085340 + AT_rich Low_complexity Low_complexity 1 45 0 1821 138 7 14 chr10 6231451 6231741 -134085024 + AluSx SINE Alu 7 294 -18 2309 102 0 36 chr10 6231844 6232037 -134084728 + L1PA15 LINE L1 5845 6023 -142 1720 154 33 10 chr10 6232037 6232336 -134084429 + AluJb SINE Alu 1 306 -6 2309 102 0 36 chr10 6232336 6232475 -134084290 + L1PA15 LINE L1 6023 6165 0 1978 82 16 0 chr10 6232542 6232799 -134083966 + AluSx SINE Alu 1 261 -51 851 71 18 0 chr10 6232843 6232955 -134083810 + AluSg/x SINE Alu 185 298 -14 28 0 0 0 chr10 6233625 6233653 -134083112 + AT_rich Low_complexity Low_complexity 1 28 0 1314 217 119 46 chr10 6234223 6234744 -134082021 + MLT1E3 LTR MaLR 32 590 -34 2109 108 3 10 chr10 6234893 6235198 -134081567 - AluSc SINE Alu -6 303 1 225 178 171 112 chr10 6235207 6235359 -134081406 - L1MC4 LINE L1 -2 8040 7880 366 280 21 0 chr10 6235453 6235546 -134081219 - MIR SINE MIR -108 154 60 291 284 0 0 chr10 6235588 6235662 -134081103 - LTR33A LTR ERVL -1 522 449 313 308 60 8 chr10 6235893 6236026 -134080739 + MIR3 SINE MIR 51 190 -18 492 203 92 26 chr10 6236555 6236708 -134080057 + LTR67 LTR ERVL 395 557 0 626 197 15 22 chr10 6236710 6236847 -134079918 - MIR SINE MIR -64 198 63 1674 167 24 17 chr10 6236902 6237224 -134079541 + AluJb SINE Alu 1 312 0 997 163 5 16 chr10 6237458 6237642 -134079123 - AluJb SINE Alu -10 302 121 622 108 32 0 chr10 6237746 6237839 -134078926 - AluJ/FLAM SINE Alu -215 97 2 3492 229 111 3 chr10 6237910 6238857 -134077908 - L1MC4 LINE L1 -237 7805 6757 2216 110 0 10 chr10 6238857 6238879 -134077886 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6238879 6238919 -134077846 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2216 110 0 10 chr10 6238919 6239206 -134077559 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6239468 6239580 -134077185 + (ATG)n Simple_repeat Simple_repeat 2 114 0 423 192 73 136 chr10 6240529 6240706 -134076059 + MER5A DNA MER1_type 24 189 0 2054 228 108 67 chr10 6241487 6241968 -134074797 - MER21B LTR ERV1 -51 812 287 1997 117 10 0 chr10 6241968 6242258 -134074507 - AluSx SINE Alu -19 293 1 2054 228 108 67 chr10 6242258 6242539 -134074226 - MER21B LTR ERV1 -576 287 19 324 257 89 20 chr10 6243438 6243539 -134073226 - L2 LINE L2 -16 3297 3190 1938 116 3 31 chr10 6243700 6243987 -134072778 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6243987 6244011 -134072754 + (CA)n Simple_repeat Simple_repeat 2 25 0 1938 116 3 31 chr10 6244011 6244042 -134072723 + AluJb SINE Alu 281 311 -1 22 35 0 0 chr10 6244493 6244522 -134072243 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6244563 6244598 -134072167 + GC_rich Low_complexity Low_complexity 1 35 0 379 238 220 24 chr10 6247214 6247382 -134069383 - LTR33 LTR ERVL -241 280 80 226 262 0 0 chr10 6247431 6247492 -134069273 - LTR33 LTR ERVL -411 110 50 205 267 198 0 chr10 6247642 6247743 -134069022 - L2 LINE L2 0 3313 3193 1886 134 3 17 chr10 6248402 6248700 -134068065 + AluJo SINE Alu 7 300 -12 2288 88 3 0 chr10 6248906 6249212 -134067553 + AluSx SINE Alu 1 307 -5 1119 89 0 182 chr10 6249224 6249460 -134067305 + 7SK RNA RNA 1 193 0 1026 116 103 1 chr10 6249477 6249684 -134067081 - L1MA5A LINE L1 -421 5876 5652 1864 131 10 16 chr10 6249939 6250244 -134066521 + AluSx SINE Alu 1 303 -9 1976 139 0 7 chr10 6250316 6250626 -134066139 + AluSx SINE Alu 1 308 -4 285 235 82 20 chr10 6251542 6251640 -134065125 - MER5B DNA MER1_type -14 164 61 420 271 49 7 chr10 6251640 6251784 -134064981 + MER112 DNA MER1_type 94 243 -17 1605 189 3 13 chr10 6252196 6252497 -134064268 + AluJb SINE Alu 2 299 -13 2022 118 33 7 chr10 6252497 6252801 -134063964 + AluSx SINE Alu 1 312 0 288 263 63 0 chr10 6252925 6253020 -134063745 - L2 LINE L2 -27 3286 3186 2114 95 3 3 chr10 6253171 6253467 -134063298 + AluSx SINE Alu 1 296 -16 565 274 119 51 chr10 6253603 6253848 -134062917 - L2 LINE L2 -342 2972 2745 2045 125 0 7 chr10 6253848 6254145 -134062620 - AluSx SINE Alu -15 297 3 565 274 119 51 chr10 6254145 6254385 -134062380 - L2 LINE L2 -569 2745 2454 2508 46 0 7 chr10 6254797 6255103 -134061662 - AluY SINE Alu -7 304 1 710 161 0 15 chr10 6255567 6255697 -134061068 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6255729 6255764 -134061001 + (TG)n Simple_repeat Simple_repeat 2 36 0 1623 172 7 14 chr10 6255765 6256055 -134060710 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6256085 6256106 -134060659 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1808 108 75 4 chr10 6256107 6256385 -134060380 - AluSg SINE Alu -12 298 1 320 145 0 32 chr10 6256523 6256585 -134060180 + FAM SINE Alu 119 178 -1 2051 95 29 13 chr10 6256588 6256894 -134059871 + AluSp SINE Alu 3 313 0 1556 189 38 0 chr10 6256937 6257228 -134059537 - AluJb SINE Alu -10 302 1 2179 92 7 10 chr10 6257607 6257911 -134058854 + AluSx SINE Alu 3 305 -7 238 223 62 9 chr10 6257912 6258024 -134058741 + L1MC4 LINE L1 7925 8042 0 2017 131 3 6 chr10 6258094 6258406 -134058359 - AluSq SINE Alu -2 311 1 246 187 120 27 chr10 6258411 6258486 -134058279 + L2 LINE L2 2885 2966 -348 370 278 30 54 chr10 6258642 6258808 -134057957 - L1MCa LINE L1 -1339 6983 1996 1155 181 0 23 chr10 6258815 6259030 -134057735 - AluJo SINE Alu -30 282 73 2928 163 45 0 chr10 6259040 6259569 -134057196 - L1MB3 LINE L1 -2 6181 5629 1641 236 79 56 chr10 6259569 6260214 -134056551 - L1MC4a LINE L1 -642 7166 6507 22 70 0 0 chr10 6260832 6260875 -134055890 + GC_rich Low_complexity Low_complexity 1 43 0 405 278 30 0 chr10 6261518 6261651 -134055114 + L3 LINE CR1 1133 1269 -308 3779 183 45 51 chr10 6261665 6262626 -134054139 - LTR5 LTR ERVK -14 955 1 586 101 114 95 chr10 6262854 6262971 -134053794 - L1PA13 LINE L1 -2 6161 6039 1778 143 61 0 chr10 6262971 6263147 -134053618 - AluSx SINE Alu 0 312 109 2138 88 3 7 chr10 6263147 6263442 -134053323 - AluSx SINE Alu -11 301 8 1778 143 61 0 chr10 6263442 6263559 -134053206 - AluSx SINE Alu -203 109 1 586 101 114 95 chr10 6263559 6263599 -134053166 - L1PA13 LINE L1 -124 6039 6001 2080 106 33 0 chr10 6263984 6264286 -134052479 - AluSp SINE Alu -1 312 1 444 262 0 16 chr10 6265509 6265635 -134051130 + MIR SINE MIR 13 136 -126 2045 103 14 3 chr10 6266130 6266420 -134050345 - AluSx SINE Alu -19 293 1 671 171 106 0 chr10 6267615 6267738 -134049027 + AluJo SINE Alu 1 136 -176 2154 77 3 71 chr10 6268180 6268516 -134048249 - AluSp SINE Alu 0 313 1 321 206 119 44 chr10 6268526 6268548 -134048217 + Charlie7 DNA MER1_type 2437 2456 -156 1757 173 16 0 chr10 6268548 6268854 -134047911 - AluJo SINE Alu -1 311 1 321 206 119 44 chr10 6268854 6268991 -134047774 + Charlie7 DNA MER1_type 2456 2608 -4 371 320 29 0 chr10 6269647 6269750 -134047015 - MIR SINE MIR -88 174 69 1667 149 0 0 chr10 6269750 6269998 -134046767 + AluJb SINE Alu 50 297 -15 257 266 41 101 chr10 6270105 6270372 -134046393 + L2 LINE L2 2837 3087 -185 260 191 0 0 chr10 6271312 6271359 -134045406 + MIR3 SINE MIR 108 154 -54 1899 123 23 13 chr10 6271963 6272271 -134044494 - AluSq SINE Alu 0 313 3 284 314 51 7 chr10 6272607 6272744 -134044021 - MIR SINE MIR -104 158 16 997 296 173 18 chr10 6272875 6273541 -134043224 + L1ME3A LINE L1 5348 6116 -54 1477 165 85 0 chr10 6273585 6273845 -134042920 - AluJo SINE Alu -30 282 1 182 293 165 45 chr10 6273887 6274020 -134042745 + MIR3 SINE MIR 34 182 -26 2145 103 16 7 chr10 6274500 6274986 -134041779 - AluSq SINE Alu 0 313 1 259 345 159 0 chr10 6276122 6276267 -134040498 + MIR SINE MIR 95 262 0 413 236 8 79 chr10 6276314 6276441 -134040324 - MIR SINE MIR -110 152 35 917 106 8 8 chr10 6277225 6277357 -134039408 + FLAM_C SINE Alu 1 132 -1 183 129 0 0 chr10 6277380 6277411 -134039354 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 353 280 75 0 chr10 6277523 6277616 -134039149 - L1ME4a LINE L1 -58 6063 5964 1770 176 13 0 chr10 6277628 6277929 -134038836 - AluJo SINE Alu -3 309 5 2661 168 24 43 chr10 6278130 6278176 -134038589 + L1MB3 LINE L1 5657 5702 -481 1369 225 13 22 chr10 6278176 6278487 -134038278 - AluJo SINE Alu -4 308 1 2661 168 24 43 chr10 6278487 6278707 -134038058 + L1MB3 LINE L1 5702 5925 -258 1692 160 76 0 chr10 6278707 6278995 -134037770 + AluJo SINE Alu 1 310 -2 2661 168 24 43 chr10 6278995 6279264 -134037501 + L1MB3 LINE L1 5925 6183 0 754 93 0 0 chr10 6280676 6280773 -134035992 + AluS SINE Alu 1 97 -216 215 79 26 0 chr10 6280781 6280819 -134035946 + (TA)n Simple_repeat Simple_repeat 1 39 0 2460 59 0 10 chr10 6280847 6281154 -134035611 - AluY SINE Alu -7 304 1 2094 139 0 0 chr10 6281202 6281512 -134035253 - AluSx SINE Alu -2 310 1 234 343 28 28 chr10 6281514 6281622 -134035143 - MER5B DNA MER1_type -38 140 33 2208 114 0 3 chr10 6281622 6281928 -134034837 - AluSq SINE Alu -5 308 4 659 151 19 0 chr10 6281938 6282044 -134034721 - FLAM_C SINE Alu -35 108 1 2360 86 3 0 chr10 6282776 6283079 -134033686 - AluSq SINE Alu -9 304 1 25 51 0 0 chr10 6283266 6283305 -134033460 + AT_rich Low_complexity Low_complexity 1 39 0 966 112 8 0 chr10 6283803 6283937 -134032828 - AluJo SINE Alu -177 135 1 401 281 113 20 chr10 6284015 6284218 -134032547 + MLT1J LTR MaLR 1 222 -289 1959 141 0 16 chr10 6284218 6284522 -134032243 + AluSx SINE Alu 1 299 -13 450 200 61 9 chr10 6284968 6285083 -134031682 - L1MC4 LINE L1 -4 8038 7918 342 115 0 0 chr10 6285094 6285146 -134031619 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 183 80 0 0 chr10 6285206 6285231 -134031534 + (TG)n Simple_repeat Simple_repeat 2 26 0 2038 216 65 93 chr10 6285268 6285619 -134031146 - L1MC4 LINE L1 -138 7904 7545 2443 192 29 27 chr10 6285619 6285959 -134030806 - L1MB2 LINE L1 -3 6168 5825 2456 57 0 16 chr10 6285959 6286274 -134030491 - AluY SINE Alu 0 311 2 2443 192 29 27 chr10 6286274 6286455 -134030310 - L1MB2 LINE L1 -346 5825 5646 2038 216 65 93 chr10 6286455 6286649 -134030116 - L1MC4 LINE L1 -497 7545 7347 2350 80 0 0 chr10 6286649 6286949 -134029816 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6286949 6287078 -134029687 - L1MC4 LINE L1 -695 7347 7216 2266 107 0 0 chr10 6287078 6287378 -134029387 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6287378 6287657 -134029108 - L1MC4 LINE L1 -826 7216 6976 809 175 7 7 chr10 6287658 6287795 -134028970 + FLAM_C SINE Alu 5 141 -2 312 203 14 14 chr10 6287795 6287869 -134028896 - L1MC4 LINE L1 -1050 6992 6919 1787 160 0 10 chr10 6287922 6288216 -134028549 - AluSx SINE Alu -21 291 1 200 358 62 0 chr10 6288636 6288717 -134028048 - MIR SINE MIR -80 128 43 198 337 12 12 chr10 6289005 6289088 -134027677 - L3 LINE CR1 -384 1193 1111 387 0 0 0 chr10 6289273 6289316 -134027449 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr10 6289480 6289514 -134027251 + (T)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr10 6289794 6289840 -134026925 + (TG)n Simple_repeat Simple_repeat 2 47 0 209 366 37 12 chr10 6290003 6290085 -134026680 - MIR SINE MIR -50 212 129 1507 176 21 35 chr10 6290196 6290509 -134026256 + AluJo SINE Alu 1 309 0 357 325 68 0 chr10 6290555 6290672 -134026093 - L2 LINE L2 0 3272 3148 1093 203 64 88 chr10 6290696 6291149 -134025616 - LTR7 LTR ERV1 -8 442 1 466 331 127 19 chr10 6291544 6291867 -134024898 + L3 LINE CR1 1192 1549 -28 2144 124 3 0 chr10 6291988 6292295 -134024470 - AluSx SINE Alu -1 311 4 1253 127 5 20 chr10 6293255 6293452 -134023313 - AluJ SINE Alu -9 303 110 1911 147 99 27 chr10 6293452 6293953 -134022812 - MLT2A2 LTR ERVL 0 554 2 724 155 0 9 chr10 6293953 6294069 -134022696 - AluJ SINE Alu -197 115 1 1637 146 3 7 chr10 6294071 6294103 -134022662 + Tigger3(Golem) DNA MER2_type 2742 2773 -255 1964 116 29 0 chr10 6294103 6294403 -134022362 - AluSx SINE Alu 0 308 1 1637 146 3 7 chr10 6294403 6294657 -134022108 + Tigger3(Golem) DNA MER2_type 2773 3028 0 891 166 57 26 chr10 6294764 6294957 -134021808 - Tigger2a DNA MER2_type -235 199 1 458 323 45 14 chr10 6294957 6295136 -134021629 - L1M4 LINE L1 -2374 3772 3589 1672 129 0 12 chr10 6295146 6295402 -134021363 + AluSx SINE Alu 60 312 0 2295 97 0 0 chr10 6295618 6295908 -134020857 - AluSx SINE Alu -22 290 1 908 144 24 0 chr10 6295909 6296076 -134020689 - L1MC1 LINE L1 -481 5852 5682 1668 143 10 67 chr10 6296608 6296922 -134019843 - AluJb SINE Alu -10 302 7 217 292 19 97 chr10 6297180 6297334 -134019431 + MIR3 SINE MIR 64 205 -3 22 0 0 0 chr10 6297776 6297798 -134018967 + GC_rich Low_complexity Low_complexity 1 22 0 303 243 0 58 chr10 6298502 6298605 -134018160 + G-rich Low_complexity Low_complexity 6 102 0 254 269 16 44 chr10 6298523 6298705 -134018060 + (CGGGG)n Simple_repeat Simple_repeat 2 178 0 * 23 33 0 0 chr10 6300252 6300282 -134016483 + GC_rich Low_complexity Low_complexity 1 30 0 35 83 0 0 chr10 6300536 6300620 -134016145 + GC_rich Low_complexity Low_complexity 1 84 0 330 311 8 0 chr10 6300918 6301037 -134015728 + CT-rich Low_complexity Low_complexity 2 121 0 22 35 0 0 chr10 6301219 6301248 -134015517 + GC_rich Low_complexity Low_complexity 1 29 0 2318 106 0 0 chr10 6302492 6302804 -134013961 - AluSx SINE Alu 0 312 1 1599 164 0 69 chr10 6302891 6303086 -134013679 - AluJo SINE Alu 0 318 111 9928 33 16 103 chr10 6303086 6304538 -134012227 - SVA Other Other -4 1382 57 207 0 0 0 chr10 6304538 6304561 -134012204 + (GGGAGA)n Simple_repeat Simple_repeat 1 23 0 1599 164 0 69 chr10 6304561 6304703 -134012062 - AluJo SINE Alu -205 113 1 1680 150 31 14 chr10 6305196 6305483 -134011282 - AluJo SINE Alu -20 292 1 198 0 0 0 chr10 6305483 6305505 -134011260 + (T)n Simple_repeat Simple_repeat 1 22 0 1824 103 38 0 chr10 6306585 6306848 -134009917 - AluSq SINE Alu -12 301 29 2194 79 41 0 chr10 6306872 6307163 -134009602 - AluY SINE Alu -8 303 1 284 142 58 24 chr10 6307430 6307460 -134009305 - AluSc SINE Alu -173 126 123 1823 64 8 0 chr10 6307460 6307694 -134009071 - AluY SINE Alu 0 311 76 284 142 58 24 chr10 6307694 6307744 -134009021 - AluSc SINE Alu -176 123 76 * 288 164 30 30 chr10 6307727 6307794 -134008971 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307777 6307844 -134008921 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307827 6307894 -134008871 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307877 6307944 -134008821 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307927 6307994 -134008771 - AluY SINE Alu -159 142 76 934 74 16 0 chr10 6307995 6308117 -134008648 - AluYb8 SINE Alu -192 126 3 316 45 0 0 chr10 6308126 6308170 -134008595 - tRNA-Cys-TGC tRNA tRNA -31 44 1 894 149 0 0 chr10 6309770 6309911 -134006854 - FLAM_C SINE Alu -2 141 1 1471 156 71 7 chr10 6310364 6310633 -134006132 + AluJo SINE Alu 2 287 -25 2036 134 27 21 chr10 6311214 6311549 -134005216 + MER1B DNA MER1_type 1 337 0 827 181 17 23 chr10 6311627 6311804 -134004961 - L1PA16 LINE L1 0 6166 5991 260 203 18 74 chr10 6312433 6312596 -134004169 + (CTGGGG)n Simple_repeat Simple_repeat 5 158 0 549 257 47 18 chr10 6312860 6313031 -134003734 + MER5B DNA MER1_type 1 176 -2 626 141 29 106 chr10 6315463 6315520 -134001245 - L1MB3 LINE L1 0 6183 6123 333 0 0 0 chr10 6315520 6315557 -134001208 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2083 101 0 14 chr10 6315557 6315843 -134000922 - AluSx SINE Alu -30 282 1 626 141 29 106 chr10 6315843 6315954 -134000811 - L1MB3 LINE L1 -58 6125 6027 481 127 0 0 chr10 6316919 6316990 -133999775 - FLAM SINE Alu -15 128 58 225 94 0 0 chr10 6317181 6317213 -133999552 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1851 146 0 4 chr10 6317227 6317507 -133999258 - AluJo SINE Alu -27 285 7 252 0 0 0 chr10 6318053 6318081 -133998684 + (CTG)n Simple_repeat Simple_repeat 2 29 0 264 272 11 11 chr10 6318083 6318175 -133998590 + (TG)n Simple_repeat Simple_repeat 2 93 0 217 186 12 12 chr10 6318196 6318282 -133998483 + (TG)n Simple_repeat Simple_repeat 1 86 0 966 230 59 45 chr10 6319444 6319818 -133996947 - L1MB5 LINE L1 -1 6173 5795 2012 104 28 7 chr10 6320738 6321027 -133995738 - AluSp SINE Alu -18 295 1 1910 137 3 20 chr10 6321589 6321895 -133994870 - AluJb SINE Alu -10 302 2 180 228 0 0 chr10 6323544 6323601 -133993164 + (CGTG)n Simple_repeat Simple_repeat 2 58 0 * 204 254 32 0 chr10 6323579 6323642 -133993123 + (TG)n Simple_repeat Simple_repeat 1 65 0 2421 80 0 0 chr10 6323914 6324215 -133992550 + AluSx SINE Alu 1 301 -11 294 246 16 0 chr10 6324606 6324667 -133992098 + MIR SINE MIR 96 157 -105 285 291 22 82 chr10 6324769 6324951 -133991814 + MIR3 SINE MIR 35 205 -3 873 179 11 17 chr10 6326851 6327133 -133989632 - MER1B DNA MER1_type 0 339 1 499 262 115 47 chr10 6327443 6327634 -133989131 + MIR SINE MIR 37 240 -22 2550 64 0 0 chr10 6327830 6328126 -133988639 - AluSq SINE Alu -17 296 1 22 0 0 0 chr10 6332367 6332389 -133984376 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 6332842 6332865 -133983900 + AT_rich Low_complexity Low_complexity 1 23 0 2362 109 0 0 chr10 6332865 6333177 -133983588 - AluSx SINE Alu 0 312 1 192 302 35 35 chr10 6333357 6333443 -133983322 + MIR SINE MIR 66 151 -57 412 299 59 18 chr10 6334083 6334304 -133982461 + L2 LINE L2 2821 3050 -263 2004 138 10 0 chr10 6334687 6334976 -133981789 - AluJb SINE Alu -20 292 1 2136 148 0 0 chr10 6335265 6335575 -133981190 - AluSx SINE Alu -2 310 1 225 0 0 0 chr10 6335588 6335613 -133981152 + (A)n Simple_repeat Simple_repeat 1 25 0 4415 85 5 0 chr10 6335667 6336257 -133980508 - L1PA12 LINE L1 0 6168 5576 233 287 59 20 chr10 6336363 6336464 -133980301 - MIR SINE MIR -98 164 60 2067 131 0 0 chr10 6336793 6337083 -133979682 - AluJb SINE Alu -21 291 2 439 212 71 0 chr10 6337085 6337184 -133979581 + Charlie2 DNA MER1_type 43 148 -2714 2046 115 3 0 chr10 6337388 6337674 -133979091 - AluSx SINE Alu -25 287 1 2541 163 48 39 chr10 6337674 6338018 -133978747 - L1MD3 LINE L1 -22 7973 7621 2351 94 0 7 chr10 6338018 6338315 -133978450 - AluSg SINE Alu -15 295 1 2541 163 48 39 chr10 6338315 6338536 -133978229 - L1MD3 LINE L1 -374 7621 7403 599 186 8 0 chr10 6338540 6338658 -133978107 - MLT1F1 LTR MaLR -447 120 2 865 122 46 8 chr10 6338660 6338791 -133977974 + AluJo SINE Alu 1 136 -176 881 183 11 123 chr10 6338795 6338939 -133977826 - L1MD3 LINE L1 -734 7261 7163 1707 165 13 22 chr10 6338939 6339254 -133977511 - AluJo SINE Alu 0 312 1 881 183 11 123 chr10 6339254 6339394 -133977371 - L1MD3 LINE L1 -832 7163 7009 2304 115 0 0 chr10 6339703 6339998 -133976767 - AluSx SINE Alu -17 295 1 296 330 46 0 chr10 6340118 6340227 -133976538 - L2 LINE L2 -10 3262 3149 1868 182 0 7 chr10 6340828 6341135 -133975630 - AluJo SINE Alu -7 305 1 802 164 31 0 chr10 6341135 6341263 -133975502 - AluJo SINE Alu -177 135 4 406 259 184 6 chr10 6342052 6342210 -133974555 - MIR3 SINE MIR -1 207 22 2325 108 0 0 chr10 6342210 6342505 -133974260 - AluSg SINE Alu -15 295 1 1812 133 0 46 chr10 6342513 6342827 -133973938 - AluJb SINE Alu 0 314 14 731 91 10 0 chr10 6342843 6342942 -133973823 - HY3 scRNA scRNA -1 100 1 2156 106 0 10 chr10 6343394 6343752 -133973013 - AluSx SINE Alu 0 355 1 29 28 0 0 chr10 6343752 6343788 -133972977 + AT_rich Low_complexity Low_complexity 1 36 0 610 223 114 0 chr10 6343788 6343954 -133972811 - L1PA16 LINE L1 -20 6146 5962 285 290 23 97 chr10 6344966 6345142 -133971623 - MIR SINE MIR -70 192 30 4758 147 20 71 chr10 6345417 6345471 -133971294 + L1MA7 LINE L1 5278 5333 -958 2121 120 0 14 chr10 6345471 6345763 -133971002 + AluSx SINE Alu 19 306 -6 4758 147 20 71 chr10 6345763 6346002 -133970763 + L1MA7 LINE L1 5333 5583 -708 2436 92 3 9 chr10 6346002 6346317 -133970448 + AluSp SINE Alu 1 313 0 4758 147 20 71 chr10 6346317 6347087 -133969678 + L1MA7 LINE L1 5583 6287 -4 1042 125 96 82 chr10 6347324 6347394 -133969371 + MLT1A1 LTR MaLR 1 69 -359 2470 59 0 20 chr10 6347394 6347697 -133969068 + AluY SINE Alu 1 297 -14 1042 125 96 82 chr10 6347697 6347976 -133968789 + MLT1A1 LTR MaLR 69 425 -3 568 242 16 59 chr10 6348025 6348211 -133968554 - MER5B DNA MER1_type 0 178 1 2358 110 3 0 chr10 6348799 6349107 -133967658 + AluSg SINE Alu 1 309 -1 479 281 106 102 chr10 6349518 6350028 -133966737 + L1MC4a LINE L1 5599 6061 -60 2352 97 0 7 chr10 6350028 6350328 -133966437 - AluSg1 SINE Alu -11 298 1 479 281 106 102 chr10 6350328 6350385 -133966380 + L1MC4a LINE L1 6061 6116 -5 2229 90 10 10 chr10 6350870 6351159 -133965606 + AluSx SINE Alu 1 289 -23 1689 148 26 22 chr10 6351592 6351903 -133964862 + MER47A DNA MER2_type 1 312 -54 2296 119 3 0 chr10 6351916 6352227 -133964538 - AluSx SINE Alu 0 312 1 2272 97 30 0 chr10 6352235 6352534 -133964231 - AluSx SINE Alu -4 308 1 286 250 0 12 chr10 6354702 6354782 -133961983 + L1ME4a LINE L1 5725 5803 -318 599 280 21 5 chr10 6354799 6354988 -133961777 - LTR16A1 LTR ERVL -14 443 252 324 262 80 43 chr10 6355177 6355364 -133961401 + L1ME4a LINE L1 5800 5993 -128 796 157 0 29 chr10 6356163 6356606 -133960159 + (TCCA)n Simple_repeat Simple_repeat 1 429 0 1071 92 0 0 chr10 6356625 6356778 -133959987 + (TCCA)n Simple_repeat Simple_repeat 4 156 0 192 304 0 0 chr10 6356784 6356830 -133959935 - L2 LINE L2 -16 3297 3252 253 323 23 46 chr10 6357001 6357131 -133959634 - MIR SINE MIR 0 262 136 225 0 0 0 chr10 6357333 6357358 -133959407 + (A)n Simple_repeat Simple_repeat 1 25 0 259 233 12 81 chr10 6357362 6357448 -133959317 - L1ME3A LINE L1 -123 6047 5968 1465 258 65 39 chr10 6357516 6358278 -133958487 - L1ME3A LINE L1 -214 5956 5172 1447 105 5 5 chr10 6358275 6358494 -133958271 + L1PA14 LINE L1 5820 6038 -123 * 1125 96 0 0 chr10 6358497 6358633 -133958132 + AluSq/x SINE Alu 1 136 -177 2273 124 0 6 chr10 6358633 6358947 -133957818 + AluSx SINE Alu 1 312 0 792 123 22 0 chr10 6358949 6359087 -133957678 + L1PA14 LINE L1 6020 6160 -1 2494 62 7 3 chr10 6359093 6359400 -133957365 + AluY SINE Alu 1 308 -3 354 304 0 0 chr10 6359412 6359524 -133957241 - L1ME3A LINE L1 -988 5158 5047 727 254 136 8 chr10 6359526 6359871 -133956894 - LTR50 LTR ERVL 0 795 326 3802 92 0 25 chr10 6359884 6360408 -133956357 - MER9 LTR ERVK 0 511 1 516 234 102 6 chr10 6360452 6360604 -133956161 - LTR50 LTR ERVL -616 159 9 2003 164 3 0 chr10 6360607 6360906 -133955859 - AluSx SINE Alu -12 300 1 1046 288 107 10 chr10 6360909 6361516 -133955249 - L1ME3A LINE L1 -1097 5049 4384 * 3524 254 53 59 chr10 6361503 6361989 -133954776 - L1MC4 LINE L1 0 8042 7554 2494 85 0 0 chr10 6361989 6362296 -133954469 - AluSx SINE Alu 0 312 6 3524 254 53 59 chr10 6362296 6362809 -133953956 - L1MC4 LINE L1 -488 7554 7054 1806 153 10 35 chr10 6362809 6363123 -133953642 - AluJo SINE Alu 0 312 7 3524 254 53 59 chr10 6363123 6363604 -133953161 - L1MC4 LINE L1 -988 7054 6571 594 257 39 45 chr10 6363625 6363804 -133952961 - MER45A DNA AcHobo 0 178 1 2634 209 80 15 chr10 6363890 6364544 -133952221 - MER45B DNA AcHobo -68 972 277 445 213 37 81 chr10 6364555 6364593 -133952172 - MER45B DNA AcHobo -895 145 107 2649 59 0 0 chr10 6364593 6364898 -133951867 + AluSx SINE Alu 1 305 -7 445 213 37 81 chr10 6364898 6364995 -133951770 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6365271 6365290 -133951475 + AT_rich Low_complexity Low_complexity 1 19 -25 1900 123 90 0 chr10 6365290 6365567 -133951198 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6365567 6365592 -133951173 + AT_rich Low_complexity Low_complexity 19 44 0 2051 154 0 7 chr10 6365660 6365966 -133950799 + AluJb SINE Alu 1 304 -8 305 213 0 16 chr10 6365974 6366035 -133950730 - L1ME3A LINE L1 -1771 4375 4316 646 191 104 0 chr10 6366262 6366377 -133950388 - FLAM_A SINE Alu -5 128 2 2275 92 0 7 chr10 6366770 6367098 -133949667 + AluSq SINE Alu 2 327 0 463 309 116 77 chr10 6367271 6367861 -133948904 + L2 LINE L2 2670 3271 -1 224 319 14 14 chr10 6368479 6368551 -133948214 + MIR SINE MIR 36 107 -155 313 404 7 7 chr10 6368870 6369006 -133947759 - L2 LINE L2 -4 3268 3133 2414 80 3 7 chr10 6369332 6369634 -133947131 + AluSx SINE Alu 1 301 -11 1490 114 0 10 chr10 6369923 6370125 -133946640 - AluSg/x SINE Alu -8 302 103 1722 194 14 81 chr10 6370489 6370845 -133945920 + MLT1B LTR MaLR 1 326 -64 1781 171 24 0 chr10 6370845 6371143 -133945622 + AluJo SINE Alu 1 305 -7 1722 194 14 81 chr10 6371143 6371204 -133945561 + MLT1B LTR MaLR 326 390 0 1226 224 88 42 chr10 6371206 6371485 -133945280 - Charlie4a DNA MER1_type -1458 503 193 1821 160 38 0 chr10 6371485 6371778 -133944987 + AluJb SINE Alu 1 304 -8 1226 224 88 42 chr10 6371778 6371954 -133944811 - Charlie4a DNA MER1_type -1768 193 27 1400 95 53 0 chr10 6372546 6372735 -133944030 - AluSg/x SINE Alu -15 297 99 1757 211 59 51 chr10 6373584 6373759 -133943006 - L1MD2 LINE L1 -24 6335 6163 261 0 0 0 chr10 6373759 6373788 -133942977 + (TG)n Simple_repeat Simple_repeat 2 30 0 1757 211 59 51 chr10 6373788 6374015 -133942750 - L1MD2 LINE L1 -196 6163 5939 2594 111 24 77 chr10 6374015 6374142 -133942623 + MSTA LTR MaLR 1 133 -295 2297 94 43 0 chr10 6374142 6374441 -133942324 - AluSx SINE Alu 0 312 1 2594 111 24 77 chr10 6374441 6374765 -133942000 + MSTA LTR MaLR 133 428 0 1757 211 59 51 chr10 6374765 6374842 -133941923 - L1MD2 LINE L1 -420 5939 5864 2226 105 0 3 chr10 6374842 6375136 -133941629 - AluSc SINE Alu -16 293 1 1757 211 59 51 chr10 6375136 6375193 -133941572 - L1MD2 LINE L1 -495 5864 5809 2153 113 20 3 chr10 6375193 6375495 -133941270 - AluSg SINE Alu -3 307 1 1757 211 59 51 chr10 6375495 6375580 -133941185 - L1MD2 LINE L1 -550 5809 5701 280 226 137 20 chr10 6375626 6375728 -133941037 + L2 LINE L2 3159 3272 0 338 354 97 4 chr10 6375753 6375979 -133940786 + MIR SINE MIR 1 247 -15 383 253 174 47 chr10 6377384 6377637 -133939128 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6377726 6378177 -133938588 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6378307 6378421 -133938344 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6378879 6379054 -133937711 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6379892 6380188 -133936577 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6380393 6380484 -133936281 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6380556 6380962 -133935803 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6380994 6381484 -133935281 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6381489 6382145 -133934620 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6382146 6382453 -133934312 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6382473 6382879 -133933886 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6382893 6383197 -133933568 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6383197 6383287 -133933478 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6383287 6383598 -133933167 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6383598 6383925 -133932840 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6383928 6384006 -133932759 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6384006 6384031 -133932734 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6384031 6384310 -133932455 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6384310 6384595 -133932170 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6384595 6385123 -133931642 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6385123 6387398 -133929367 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6387407 6387724 -133929041 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6387724 6387921 -133928844 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6388204 6388495 -133928270 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6388866 6389174 -133927591 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6389193 6389509 -133927256 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6390263 6390566 -133926199 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6391185 6391544 -133925221 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6391675 6392136 -133924629 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6392136 6392446 -133924319 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6392446 6393107 -133923658 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6393119 6393152 -133923613 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6393279 6393901 -133922864 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6395293 6395586 -133921179 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6396618 6396744 -133920021 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6396889 6396917 -133919848 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6397176 6397294 -133919471 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6398965 6399281 -133917484 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6399290 6399600 -133917165 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6399657 6399670 -133917095 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6399670 6399715 -133917050 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6399799 6399947 -133916818 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6400454 6400749 -133916016 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6400778 6400974 -133915791 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6401429 6401572 -133915193 - AluSq/x SINE Alu -161 151 10 1057 178 108 91 chr10 6401606 6401892 -133914873 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6401901 6401922 -133914843 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6401928 6402072 -133914693 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6402106 6402401 -133914364 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6402586 6402904 -133913861 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6402946 6403118 -133913647 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6403794 6404216 -133912549 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6404228 6404285 -133912480 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6404285 6404320 -133912445 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6404420 6404537 -133912228 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6404688 6405059 -133911706 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6405151 6405455 -133911310 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6405822 6406202 -133910563 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6406203 6406256 -133910509 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6406257 6406542 -133910223 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6406576 6406770 -133909995 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6408392 6408698 -133908067 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6409353 6410350 -133906415 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6410561 6410710 -133906055 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6411204 6411677 -133905088 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6412199 6412313 -133904452 - MER41B LTR ERV1 0 635 516 248 218 39 26 chr10 6412317 6412395 -133904370 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6412400 6412706 -133904059 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6413072 6413272 -133903493 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6413391 6413683 -133903082 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6415998 6416032 -133900733 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6416032 6416541 -133900224 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6416554 6416617 -133900148 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6416837 6417140 -133899625 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6417370 6417645 -133899120 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6417875 6417927 -133898838 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6418102 6418555 -133898210 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6418558 6418694 -133898071 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6418776 6419955 -133896810 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6420041 6420329 -133896436 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6420628 6420916 -133895849 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6420916 6421351 -133895414 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6421351 6421650 -133895115 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6421650 6421739 -133895026 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6421890 6422184 -133894581 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6422759 6423028 -133893737 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6423028 6423383 -133893382 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6423383 6423471 -133893294 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6423555 6423639 -133893126 + MER109 Unknown Unknown 536 617 -1815 2005 136 3 23 chr10 6424090 6424400 -133892365 - AluSx SINE Alu -8 304 1 292 39 0 58 chr10 6424420 6424472 -133892293 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 798 135 26 17 chr10 6424494 6424971 -133891794 + (TCCA)n Simple_repeat Simple_repeat 1 481 0 2050 141 0 0 chr10 6426388 6426687 -133890078 + AluSx SINE Alu 1 299 -13 289 312 98 17 chr10 6426866 6427039 -133889726 + L3b LINE CR1 1287 1473 -110 2148 123 7 0 chr10 6428112 6428414 -133888351 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6430571 6430709 -133886056 + MIR SINE MIR 47 203 -59 938 92 0 7 chr10 6430963 6431116 -133885649 + (GA)n Simple_repeat Simple_repeat 1 152 0 277 219 68 14 chr10 6431346 6431419 -133885346 + MIR SINE MIR 68 144 -64 690 192 8 0 chr10 6431587 6431707 -133885058 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6432612 6432675 -133884090 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6432758 6433008 -133883757 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6433005 6433082 -133883683 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6433343 6433434 -133883331 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6433487 6433597 -133883168 + L1MC1 LINE L1 5792 5904 -429 1921 114 88 0 chr10 6434327 6434599 -133882166 + AluSx SINE Alu 1 296 -16 2213 111 3 32 chr10 6435118 6435458 -133881307 + AluSx SINE Alu 1 312 0 2515 72 0 0 chr10 6435684 6435988 -133880777 + AluY SINE Alu 1 304 -7 1517 228 198 92 chr10 6436162 6436364 -133880401 + LTR24B LTR ERV1 1 180 -455 2162 118 7 3 chr10 6436364 6436670 -133880095 - AluSq SINE Alu -6 307 1 1517 228 198 92 chr10 6436670 6437042 -133879723 + LTR24B LTR ERV1 180 635 0 1044 31 87 0 chr10 6439695 6439822 -133876943 - MER85 DNA T2_type -1 138 1 314 308 31 0 chr10 6440249 6440379 -133876386 - L1ME LINE L1 -299 5822 5689 252 323 152 0 chr10 6440905 6441004 -133875761 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6441245 6441574 -133875191 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6441925 6442053 -133874712 + L1ME4a LINE L1 5975 6121 0 2028 101 3 83 chr10 6443307 6443633 -133873132 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6444160 6444331 -133872434 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6445635 6445706 -133871059 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6445816 6445978 -133870787 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6445981 6446105 -133870660 + FLAM_A SINE Alu 1 127 -15 943 213 9 28 chr10 6446110 6446304 -133870461 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6446304 6446661 -133870104 - THE1B LTR MaLR 0 364 1 943 213 9 28 chr10 6446661 6446682 -133870083 + MLT1B LTR MaLR 370 390 0 1774 167 3 7 chr10 6447795 6448095 -133868670 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6449982 6450407 -133866358 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6451379 6451689 -133865076 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6451849 6451890 -133864875 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6452051 6452347 -133864418 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6452456 6452744 -133864021 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6453193 6453256 -133863509 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6453210 6453393 -133863372 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6454109 6454444 -133862321 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6456074 6456247 -133860518 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6456814 6457134 -133859631 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6457378 6457490 -133859275 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6458326 6458897 -133857868 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6459014 6459178 -133857587 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6459431 6459597 -133857168 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6459597 6459905 -133856860 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6459942 6459968 -133856797 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6460329 6460508 -133856257 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6463930 6463961 -133852804 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6464030 6464149 -133852616 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6465203 6465513 -133851252 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6467434 6467454 -133849311 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6467454 6467740 -133849025 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6467740 6467761 -133849004 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6468555 6468855 -133847910 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6469061 6469119 -133847646 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6469135 6469311 -133847454 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6469336 6469607 -133847158 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6469890 6470091 -133846674 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6470098 6470149 -133846616 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6470149 6470321 -133846444 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6472047 6472197 -133844568 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6473141 6473372 -133843393 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6474151 6474334 -133842431 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6475122 6475568 -133841197 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6477111 6477131 -133839634 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6477500 6477692 -133839073 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6478486 6478602 -133838163 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6481252 6481286 -133835479 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6481633 6481872 -133834893 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6482172 6482203 -133834562 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6482205 6482508 -133834257 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6482561 6482644 -133834121 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6482663 6482710 -133834055 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6482991 6483665 -133833100 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6483781 6483923 -133832842 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6484150 6484317 -133832448 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6485095 6485254 -133831511 + MIR SINE MIR 98 262 0 273 29 0 0 chr10 6485552 6485586 -133831179 + (TTATG)n Simple_repeat Simple_repeat 1 34 0 2271 85 4 0 chr10 6485586 6485905 -133830860 - AluSx SINE Alu 0 320 1 1656 154 45 45 chr10 6486831 6487117 -133829648 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6487122 6487166 -133829599 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6487901 6488102 -133828663 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6488897 6488949 -133827816 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6488959 6489087 -133827678 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6489100 6489152 -133827613 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6489701 6489785 -133826980 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6489932 6489958 -133826807 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6489976 6490822 -133825943 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6491222 6491941 -133824824 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6493342 6493534 -133823231 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6494721 6494887 -133821878 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6494978 6495186 -133821579 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6495494 6495668 -133821097 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6496509 6496542 -133820223 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6496666 6496872 -133819893 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6496872 6497160 -133819605 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6497160 6497281 -133819484 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6497300 6497664 -133819101 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6497744 6497766 -133818999 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6497771 6497854 -133818911 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6497897 6498170 -133818595 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6498214 6498369 -133818396 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6498431 6498476 -133818289 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6498627 6498768 -133817997 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6499167 6499245 -133817520 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6501063 6501160 -133815605 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6502445 6502469 -133814296 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6502472 6502711 -133814054 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6502942 6503416 -133813349 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6503533 6503831 -133812934 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6503876 6504658 -133812107 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6504660 6505136 -133811629 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6505197 6505362 -133811403 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6505358 6505588 -133811177 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6505818 6505880 -133810885 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6507039 6507069 -133809696 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6508290 6508581 -133808184 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6508934 6509053 -133807712 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6509053 6509394 -133807371 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6509394 6509688 -133807077 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6509688 6509738 -133807027 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6509738 6509823 -133806942 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6510130 6510820 -133805945 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6510820 6512556 -133804209 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6513179 6513241 -133803524 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6513247 6513288 -133803477 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6513288 6513595 -133803170 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6513595 6513945 -133802820 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6513945 6514237 -133802528 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6514237 6514617 -133802148 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6514658 6515046 -133801719 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6515046 6515359 -133801406 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6515359 6515868 -133800897 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6516124 6516430 -133800335 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6516430 6516892 -133799873 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6516918 6517181 -133799584 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6517225 6517302 -133799463 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6517310 6517453 -133799312 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6517738 6517800 -133798965 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6518407 6518935 -133797830 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6519395 6519703 -133797062 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6519824 6520119 -133796646 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6520123 6520358 -133796407 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6520427 6520560 -133796205 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6523031 6523322 -133793443 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6523499 6523601 -133793164 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6523603 6523786 -133792979 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6524421 6524717 -133792048 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6524766 6525063 -133791702 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6526358 6526567 -133790198 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6527394 6527519 -133789246 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6528280 6528445 -133788320 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6531614 6531909 -133784856 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6532107 6532142 -133784623 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6532164 6532461 -133784304 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6532789 6532921 -133783844 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6534214 6534518 -133782247 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6535192 6535518 -133781247 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6535890 6536703 -133780062 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6536743 6536879 -133779886 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6537498 6537785 -133778980 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6538068 6538182 -133778583 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6538634 6538778 -133777987 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6539375 6539425 -133777340 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6539425 6539720 -133777045 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6539720 6540398 -133776367 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6540423 6540604 -133776161 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6540712 6540734 -133776031 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6541204 6541228 -133775537 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6543843 6543871 -133772894 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6543951 6544001 -133772764 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6544933 6545225 -133771540 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6545606 6545646 -133771119 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6546002 6546307 -133770458 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6546315 6546488 -133770277 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6546526 6546830 -133769935 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6548196 6548221 -133768544 + (A)n Simple_repeat Simple_repeat 1 25 0 448 320 39 43 chr10 6548481 6548737 -133768028 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6549779 6549814 -133766951 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6550644 6550686 -133766079 + AT_rich Low_complexity Low_complexity 1 42 0 560 251 49 0 chr10 6551005 6551168 -133765597 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6551297 6551331 -133765434 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr10 6551433 6551455 -133765310 + AT_rich Low_complexity Low_complexity 1 22 0 1470 258 107 24 chr10 6552679 6553275 -133763490 + L1ME3A LINE L1 5504 6163 -7 200 252 0 75 chr10 6553584 6553691 -133763074 + CT-rich Low_complexity Low_complexity 1 99 0 2451 122 13 5 chr10 6554149 6554535 -133762230 + L1PB1 LINE L1 5763 6151 0 344 284 20 0 chr10 6555573 6555675 -133761090 + MIR3 SINE MIR 59 162 -46 428 276 16 16 chr10 6557523 6557646 -133759119 + L2 LINE L2 3191 3313 0 748 230 45 6 chr10 6557947 6558125 -133758640 - MLT1E2 LTR MaLR 0 626 442 465 299 5 45 chr10 6558335 6558536 -133758229 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6558546 6558569 -133758196 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1598 132 21 24 chr10 6558591 6558879 -133757886 - L1MA8 LINE L1 -24 6267 5981 412 231 78 25 chr10 6558903 6559023 -133757742 + L1ME2 LINE L1 6045 6178 0 559 189 0 0 chr10 6559115 6559210 -133757555 - L1MB1 LINE L1 -18 6150 6056 281 310 90 19 chr10 6560457 6560612 -133756153 - MIR SINE MIR -73 189 24 3057 153 53 24 chr10 6561016 6561636 -133755129 - L1MA8 LINE L1 -2 6289 5652 1077 182 81 4 chr10 6562217 6562464 -133754301 - L1MA4 LINE L1 -2 6298 6033 1447 127 115 44 chr10 6562464 6562822 -133753943 + MSTA LTR MaLR 1 428 0 228 111 22 0 chr10 6562822 6562867 -133753898 - L1MA4 LINE L1 -263 6037 5992 497 305 69 59 chr10 6563278 6563472 -133753293 - LTR16C LTR ERVL -2 489 289 2082 87 128 42 chr10 6563472 6563807 -133752958 - THE1B LTR MaLR 0 364 1 497 305 69 59 chr10 6563807 6563917 -133752848 - LTR16C LTR ERVL -202 289 182 392 248 16 48 chr10 6564110 6564235 -133752530 - MER117 DNA MER1_type -74 123 3 3528 151 0 6 chr10 6564849 6565378 -133751387 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6565647 6565671 -133751094 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 393 325 12 30 chr10 6567426 6567595 -133749170 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6567910 6567933 -133748832 + (TG)n Simple_repeat Simple_repeat 1 23 0 409 353 22 27 chr10 6568144 6568552 -133748213 + ERVL LTR ERVL 904 1309 -4455 1384 169 98 128 chr10 6568579 6569087 -133747678 - MLT1D LTR MaLR 0 505 13 2476 69 3 0 chr10 6569320 6569623 -133747142 - AluY SINE Alu -7 304 1 227 186 85 0 chr10 6570211 6570270 -133746495 - MIR SINE MIR -2 260 197 2251 88 0 16 chr10 6570270 6570578 -133746187 - AluY SINE Alu -4 307 5 384 265 20 0 chr10 6570816 6570914 -133745851 - MIR SINE MIR -79 129 30 204 324 40 85 chr10 6572083 6572355 -133744410 - L2 LINE L2 -120 3152 2893 182 267 0 33 chr10 6572462 6572522 -133744243 - MIR SINE MIR -35 227 170 789 278 12 0 chr10 6573163 6573336 -133743429 - MER45A DNA AcHobo -1 177 3 195 330 33 0 chr10 6573606 6573697 -133743068 - L3b LINE CR1 -200 1383 1290 354 325 156 50 chr10 6574027 6574482 -133742283 - L2 LINE L2 -3 3310 2808 1221 249 291 29 chr10 6574533 6575163 -133741602 + LTR50 LTR ERVL 1 795 0 409 274 70 35 chr10 6575179 6575380 -133741385 - L2 LINE L2 -843 2471 2264 206 306 51 0 chr10 6575390 6575488 -133741277 - L2 LINE L2 -1223 2091 1989 4616 173 46 20 chr10 6575490 6576858 -133739907 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6577376 6577735 -133739030 + THE1B LTR MaLR 1 364 0 4530 108 14 47 chr10 6578165 6578908 -133737857 - L1PB1 LINE L1 -2 6149 5432 6669 224 67 103 chr10 6578910 6580404 -133736361 + Charlie6 DNA MER1_type 83 1630 -1870 519 270 0 0 chr10 6580404 6580519 -133736246 + FLAM_A SINE Alu 2 116 -17 2219 60 3 7 chr10 6580520 6580804 -133735961 - L1PA5 LINE L1 -3 6151 5869 1306 138 0 0 chr10 6580809 6581012 -133735753 + AluSg/x SINE Alu 103 305 -5 6669 224 67 103 chr10 6581012 6581838 -133734927 + Charlie6 DNA MER1_type 1634 2521 -979 1125 215 80 10 chr10 6581871 6582159 -133734606 - L1MCa LINE L1 -6075 351 44 236 30 30 0 chr10 6582171 6582204 -133734561 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6582331 6582953 -133733812 - MER41B LTR ERV1 0 635 1 1565 174 41 0 chr10 6584345 6584638 -133732127 - AluJo SINE Alu -7 305 1 323 325 8 8 chr10 6585670 6585796 -133730969 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6585941 6585969 -133730796 + (T)n Simple_repeat Simple_repeat 1 28 0 343 296 44 44 chr10 6586228 6586363 -133730402 + L2 LINE L2 3138 3272 0 2151 126 0 0 chr10 6588017 6588319 -133728446 - AluSx SINE Alu -2 310 9 2400 77 7 0 chr10 6588342 6588652 -133728113 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6588709 6588722 -133728043 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6588722 6588767 -133727998 + (CA)n Simple_repeat Simple_repeat 2 46 0 254 294 105 46 chr10 6588846 6588999 -133727766 - MIR3 SINE MIR -6 202 41 380 360 105 14 chr10 6589189 6589475 -133727290 + L1M4 LINE L1 3613 3924 -2222 2062 92 44 0 chr10 6589506 6589801 -133726964 + AluSg SINE Alu 2 309 -1 429 265 158 15 chr10 6589830 6590026 -133726739 + MLT1J2 LTR MaLR 111 334 -116 1013 112 0 7 chr10 6590481 6590624 -133726141 - AluSq/x SINE Alu -162 151 10 963 178 108 91 chr10 6590658 6590944 -133725821 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6590953 6590974 -133725791 + AT_rich Low_complexity Low_complexity 1 21 0 796 125 0 76 chr10 6590980 6591124 -133725641 - FLAM_C SINE Alu 0 143 11 1214 173 105 85 chr10 6591158 6591453 -133725312 - AluJo SINE Alu -1 301 1 566 299 35 53 chr10 6591638 6591956 -133724809 - L1MEd LINE L1 -5397 722 411 913 209 0 0 chr10 6591998 6592170 -133724595 - FAM SINE Alu -3 172 1 1358 225 55 55 chr10 6592846 6593268 -133723497 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6593280 6593337 -133723428 + (CA)n Simple_repeat Simple_repeat 2 57 0 278 57 0 0 chr10 6593337 6593372 -133723393 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6593472 6593589 -133723176 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6593740 6594111 -133722654 + MSTD LTR MaLR 7 396 0 2056 122 0 10 chr10 6594203 6594507 -133722258 + AluSx SINE Alu 1 301 -11 649 218 40 111 chr10 6594874 6595254 -133721511 + L1MC5 LINE L1 7340 7692 -269 376 132 0 0 chr10 6595255 6595308 -133721457 + Alu SINE Alu 2 54 -246 1628 134 0 50 chr10 6595309 6595592 -133721173 + AluSx SINE Alu 12 280 -32 515 268 82 10 chr10 6595628 6595822 -133720943 + L1MC5 LINE L1 7678 7885 -76 2065 114 16 0 chr10 6597444 6597750 -133719015 + AluSx SINE Alu 1 311 -1 3082 251 77 28 chr10 6598405 6599402 -133717363 + MER97b DNA MER1_type? 1 1046 -7 344 362 60 0 chr10 6599613 6599762 -133717003 + L2 LINE L2 3114 3271 -1 863 277 74 38 chr10 6600256 6600729 -133716036 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6601251 6601365 -133715400 - MER41B LTR ERV1 0 635 516 251 218 39 26 chr10 6601369 6601447 -133715318 - L1MC5 LINE L1 -519 7442 7364 1982 131 13 7 chr10 6601452 6601758 -133715007 - AluSx SINE Alu -4 308 1 350 305 135 10 chr10 6602124 6602324 -133714441 + LTR16A LTR ERVL 1 225 -225 1815 134 62 0 chr10 6602443 6602735 -133714030 - AluSx SINE Alu -2 310 1 187 286 0 0 chr10 6604966 6605008 -133711757 + L2 LINE L2 3256 3297 -16 192 210 210 16 chr10 6605022 6605084 -133711681 - L2 LINE L2 -9 3304 3231 3174 149 28 0 chr10 6605084 6605593 -133711172 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6605606 6605669 -133711096 + AT_rich Low_complexity Low_complexity 1 63 0 2003 125 3 10 chr10 6605889 6606192 -133710573 + AluJb SINE Alu 1 301 -11 1259 193 120 7 chr10 6606422 6606697 -133710068 - AluJb SINE Alu -6 306 1 267 231 39 0 chr10 6606927 6606979 -133709786 - MLT1K LTR MaLR -357 231 178 417 320 80 75 chr10 6607154 6607607 -133709158 + L2 LINE L2 449 903 -2411 229 297 94 80 chr10 6607608 6607746 -133709019 + L2 LINE L2 1083 1222 -2092 1239 310 98 41 chr10 6607828 6609007 -133707758 + L2 LINE L2 2056 3308 -5 1310 201 21 49 chr10 6609093 6609381 -133707384 - MLT2B1 LTR ERVL -8 512 233 1400 198 52 7 chr10 6609680 6609968 -133706797 + L1M3 LINE L1 5443 5743 -437 2583 145 9 53 chr10 6609968 6610403 -133706362 + L1MB3 LINE L1 5679 6089 -94 1957 124 0 10 chr10 6610403 6610702 -133706063 - AluSx SINE Alu -16 296 1 2583 145 9 53 chr10 6610702 6610791 -133705974 + L1MB3 LINE L1 6089 6180 -3 1664 170 3 14 chr10 6610942 6611236 -133705529 - AluSx SINE Alu -21 291 1 366 296 53 29 chr10 6611926 6612080 -133704685 + MER109 Unknown Unknown 531 695 -1737 2318 96 11 20 chr10 6612080 6612435 -133704330 + L1PA10 LINE L1 5817 6168 0 366 296 53 29 chr10 6612435 6612523 -133704242 + MER109 Unknown Unknown 695 779 -1653 239 286 12 36 chr10 6612607 6612691 -133704074 + MER109 Unknown Unknown 536 617 -1815 2605 217 65 74 chr10 6612875 6613757 -133703008 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6614982 6615040 -133701725 + T-rich Low_complexity Low_complexity 2 59 0 703 144 17 8 chr10 6615645 6615763 -133701002 - FLAM_C SINE Alu -18 125 7 1309 140 4 13 chr10 6615892 6616121 -133700644 - AluJb SINE Alu 0 312 86 2174 58 0 42 chr10 6616425 6616734 -133700031 - AluY SINE Alu -15 296 1 436 244 151 8 chr10 6616752 6616871 -133699894 + MER5B DNA MER1_type 1 136 -42 261 152 0 22 chr10 6616976 6617022 -133699743 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6617022 6617112 -133699653 + GA-rich Low_complexity Low_complexity 1 90 0 266 146 83 0 chr10 6617112 6617160 -133699605 - AluJ/FRAM SINE Alu -20 282 231 195 260 120 0 chr10 6617168 6617218 -133699547 + MER5B DNA MER1_type 123 178 0 187 265 98 78 chr10 6617236 6617276 -133699489 - L2 LINE L2 -22 3291 3253 1419 195 54 41 chr10 6617276 6617645 -133699120 + MLT1A2 LTR MaLR 1 374 0 187 265 98 78 chr10 6617645 6617706 -133699059 - L2 LINE L2 -60 3253 3188 1968 128 0 7 chr10 6617846 6618164 -133698601 + AluSx SINE Alu 1 312 0 1344 146 24 0 chr10 6618384 6618596 -133698169 + MER20 DNA MER1_type 1 217 -2 222 368 105 0 chr10 6618626 6618740 -133698025 - MIR SINE MIR -77 185 60 254 206 0 44 chr10 6619434 6619485 -133697280 - MLT2B1 LTR ERVL 0 520 471 2334 120 52 14 chr10 6619485 6619834 -133696931 - THE1B LTR MaLR 0 364 3 254 206 0 44 chr10 6619834 6619850 -133696915 - MLT2B1 LTR ERVL -49 471 456 1360 201 99 43 chr10 6619903 6620299 -133696466 - MLT2B1 LTR ERVL -37 377 4 934 177 6 6 chr10 6620441 6620605 -133696160 + MER3 DNA MER1_type 41 204 -5 527 231 0 0 chr10 6620838 6620942 -133695823 - L2 LINE L2 0 3272 3169 228 260 260 0 chr10 6621017 6621113 -133695652 - L2 LINE L2 -5 3308 3188 363 291 64 71 chr10 6621168 6621204 -133695561 - MIR SINE MIR -75 187 152 2056 110 7 7 chr10 6621204 6621503 -133695262 - AluSg SINE Alu -11 299 1 363 291 64 71 chr10 6621503 6621607 -133695158 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6622303 6622344 -133694421 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1469 163 64 34 chr10 6622348 6622371 -133694394 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6622371 6622425 -133694340 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1469 163 64 34 chr10 6622425 6622696 -133694069 - AluJb SINE Alu -29 283 1 1218 188 125 15 chr10 6622705 6622977 -133693788 - AluJo SINE Alu 0 302 1 22 35 0 0 chr10 6623175 6623204 -133693561 + AT_rich Low_complexity Low_complexity 1 29 0 441 280 159 5 chr10 6623374 6623563 -133693202 + MLT1I LTR MaLR 186 403 -6 208 191 132 29 chr10 6623633 6623701 -133693064 + L3b LINE CR1 1263 1337 -246 364 322 60 38 chr10 6623753 6623936 -133692829 + MIR SINE MIR 21 207 -55 306 197 26 0 chr10 6623997 6624114 -133692651 + (TA)n Simple_repeat Simple_repeat 2 121 0 303 327 28 19 chr10 6624152 6624259 -133692506 - L1MC4 LINE L1 -1331 6711 6604 369 324 93 0 chr10 6625305 6625487 -133691278 - L2 LINE L2 -420 2894 2696 3221 152 9 12 chr10 6625497 6626055 -133690710 + L1MB3 LINE L1 5587 6142 -41 1829 133 3 63 chr10 6626055 6626370 -133690395 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6626370 6626423 -133690342 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 299 96 19 0 chr10 6626423 6626475 -133690290 + L1MB3 LINE L1 6131 6183 0 247 284 30 113 chr10 6626478 6626946 -133689819 - L2 LINE L2 -620 2694 2266 442 173 6 0 chr10 6627179 6627259 -133689506 + L1MA7 LINE L1 5857 5940 -240 1371 105 10 29 chr10 6627260 6627469 -133689296 - AluSg/x SINE Alu -9 301 97 1525 183 39 39 chr10 6627470 6627825 -133688940 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6628506 6628804 -133687961 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6629398 6629516 -133687249 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6630465 6630944 -133685821 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6631452 6631745 -133685020 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6631778 6631985 -133684780 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6633022 6633331 -133683434 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6635086 6635255 -133681510 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6635275 6635562 -133681203 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6635581 6635612 -133681153 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6636818 6637292 -133679473 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6637486 6637764 -133679001 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6638123 6638198 -133678567 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6638359 6638372 -133678393 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6638372 6638427 -133678338 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6638427 6638531 -133678234 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6638584 6638918 -133677847 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6639000 6639063 -133677702 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6639269 6639301 -133677464 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6641194 6641302 -133675463 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6642342 6642692 -133674073 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6642709 6642883 -133673882 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6642883 6643900 -133672865 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6643900 6644754 -133672011 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6644755 6645421 -133671344 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6645421 6645485 -133671280 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6645485 6647933 -133668832 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6649675 6649793 -133666972 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6650192 6650254 -133666511 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6650254 6650631 -133666134 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6650631 6650676 -133666089 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6650703 6650754 -133666011 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6650761 6650796 -133665969 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6651585 6652092 -133664673 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6652092 6652524 -133664241 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6652524 6652565 -133664200 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6652911 6653336 -133663429 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6653816 6653933 -133662832 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6654338 6654874 -133661891 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6655011 6655064 -133661701 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6655607 6661639 -133655126 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6661698 6662170 -133654595 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6662226 6662349 -133654416 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6662639 6662707 -133654058 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6662828 6662960 -133653805 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6663069 6663372 -133653393 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6663377 6663765 -133653000 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6664168 6664533 -133652232 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6664615 6664652 -133652113 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6664928 6665063 -133651702 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6665067 6665178 -133651587 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6665260 6665369 -133651396 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6665410 6665756 -133651009 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6665756 6667318 -133649447 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6667318 6667667 -133649098 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6669605 6669906 -133646859 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6670249 6670273 -133646492 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6672821 6672867 -133643898 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6672878 6673053 -133643712 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6673083 6673134 -133643631 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6673152 6673338 -133643427 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6673446 6673754 -133643011 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6673880 6674233 -133642532 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6674233 6674700 -133642065 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6674711 6675273 -133641492 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6675286 6675380 -133641385 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6675378 6676604 -133640161 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6676604 6677297 -133639468 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6677297 6678004 -133638761 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6678326 6678919 -133637846 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6679187 6679380 -133637385 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6679539 6679846 -133636919 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6680907 6681028 -133635737 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6681028 6681335 -133635430 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6681335 6681422 -133635343 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6681430 6681787 -133634978 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6682224 6683082 -133633683 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6683082 6683365 -133633400 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6683365 6683614 -133633151 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6683614 6683918 -133632847 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6683918 6684310 -133632455 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6684564 6684685 -133632080 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6684714 6685014 -133631751 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6685186 6685226 -133631539 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6686043 6686153 -133630612 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6686172 6686373 -133630392 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6686360 6686453 -133630312 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6686529 6686602 -133630163 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6686715 6686847 -133629918 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6686929 6687374 -133629391 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6688030 6688317 -133628448 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6688343 6688365 -133628400 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6688625 6688905 -133627860 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6689749 6689805 -133626960 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6690189 6690259 -133626506 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6690339 6690507 -133626258 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6690510 6690693 -133626072 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6690684 6690946 -133625819 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6690954 6691254 -133625511 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6693442 6693568 -133623197 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6693585 6693689 -133623076 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6693698 6694331 -133622434 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6694332 6694626 -133622139 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6694743 6695057 -133621708 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6695262 6695566 -133621199 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6696523 6696672 -133620093 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6696672 6696969 -133619796 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6696969 6697007 -133619758 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6697161 6697314 -133619451 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6697558 6697718 -133619047 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6698038 6698180 -133618585 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6698301 6698709 -133618056 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6698916 6699223 -133617542 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6699446 6699479 -133617286 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6699509 6699530 -133617235 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6699856 6700202 -133616563 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6700205 6700943 -133615822 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6700943 6701234 -133615531 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6701234 6701363 -133615402 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6701373 6701428 -133615337 + (TA)n Simple_repeat Simple_repeat 2 56 0 2182 113 0 10 chr10 6701718 6702018 -133614747 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6702189 6702899 -133613866 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6704742 6705182 -133611583 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6705209 6705267 -133611498 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6705294 6705657 -133611108 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6705657 6705960 -133610805 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6705969 6706216 -133610549 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6706216 6707087 -133609678 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6707176 6707468 -133609297 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6707468 6707591 -133609174 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6708141 6708266 -133608499 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6708293 6708420 -133608345 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6708426 6708639 -133608126 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6711197 6711493 -133605272 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6711664 6711789 -133604976 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6712215 6712323 -133604442 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6712664 6712696 -133604069 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6712814 6713007 -133603758 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6714701 6714763 -133602002 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6715690 6715914 -133600851 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6715914 6716126 -133600639 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6717134 6717255 -133599510 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6717267 6717447 -133599318 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6717476 6717546 -133599219 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6718574 6718683 -133598082 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6719316 6719443 -133597322 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6719581 6719671 -133597094 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6719720 6720031 -133596734 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6720341 6720373 -133596392 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6720887 6721080 -133595685 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6721576 6721785 -133594980 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6721812 6722099 -133594666 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6722272 6722393 -133594372 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6722410 6722740 -133594025 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6723131 6723490 -133593275 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6723618 6723924 -133592841 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6724569 6724869 -133591896 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6725392 6725461 -133591304 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6725450 6725873 -133590892 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6725880 6726231 -133590534 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6726678 6726970 -133589795 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6727219 6727413 -133589352 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6727428 6727543 -133589222 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6728651 6728948 -133587817 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6729282 6729653 -133587112 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6729651 6729822 -133586943 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6729831 6729880 -133586885 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6729880 6730034 -133586731 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6730034 6730327 -133586438 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6730327 6730411 -133586354 + L1MB2 LINE L1 6086 6169 -2 515 124 27 2 chr10 6730328 6730424 -133586341 + L1MB2 LINE L1 6085 6169 -2 219 146 0 0 chr10 6730663 6730704 -133586061 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6730841 6731121 -133585644 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6732072 6732221 -133584544 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6732329 6732637 -133584128 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6733098 6733395 -133583370 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6734387 6734678 -133582087 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6734757 6740056 -133576709 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6740495 6740822 -133575943 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6741698 6741861 -133574904 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6742162 6742239 -133574526 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6743278 6743503 -133573262 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6743503 6743567 -133573198 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6743567 6743900 -133572865 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6743919 6744205 -133572560 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6745427 6745848 -133570917 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6746452 6746763 -133570002 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6746797 6747277 -133569488 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6748694 6748992 -133567773 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6749171 6749344 -133567421 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6750417 6750719 -133566046 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6752876 6753014 -133563751 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6753268 6753429 -133563336 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6753659 6753732 -133563033 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6753900 6754020 -133562745 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6754925 6754988 -133561777 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6755071 6755321 -133561444 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6755318 6755395 -133561370 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6755656 6755747 -133561018 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6755800 6755910 -133560855 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6756640 6756913 -133559852 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6757432 6757772 -133558993 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6757998 6758302 -133558463 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6758476 6758678 -133558087 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6758678 6758984 -133557781 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6758984 6759356 -133557409 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6762009 6762136 -133554629 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6762559 6762691 -133554074 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6763217 6763316 -133553449 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6763557 6763886 -133552879 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6764237 6764365 -133552400 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6765619 6765941 -133550824 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6766468 6766639 -133550126 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6767943 6768014 -133548751 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6768124 6768286 -133548479 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6768289 6768413 -133548352 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6768418 6768612 -133548153 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6768612 6768969 -133547796 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6768969 6768990 -133547775 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6770103 6770403 -133546362 + AluSx SINE Alu 1 299 -13 456 216 32 64 chr10 6771757 6771882 -133544883 - MER91C DNA MER1_type -19 121 1 2379 91 0 0 chr10 6772330 6772638 -133544127 - AluY SINE Alu -3 308 1 228 272 39 29 chr10 6774130 6774233 -133542532 - MIR SINE MIR -50 212 109 195 139 0 0 chr10 6774698 6774734 -133542031 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6775304 6775336 -133541429 + (TA)n Simple_repeat Simple_repeat 1 32 0 1593 167 15 11 chr10 6775689 6775953 -133540812 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6776760 6776800 -133539965 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1688 160 0 80 chr10 6776806 6777119 -133539646 - AluJo SINE Alu -24 288 1 1826 161 0 55 chr10 6777120 6777450 -133539315 - AluSx SINE Alu 0 312 1 658 259 93 22 chr10 6777999 6778277 -133538488 - L1M4 LINE L1 -2147 3999 3702 1768 133 19 70 chr10 6778616 6778744 -133538021 + AluJb SINE Alu 1 134 -178 2329 57 4 0 chr10 6778744 6779024 -133537741 + AluY SINE Alu 1 281 -30 1768 133 19 70 chr10 6779024 6779211 -133537554 + AluJb SINE Alu 134 300 -12 239 218 119 50 chr10 6779503 6779604 -133537161 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6779791 6779820 -133536945 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6779829 6779974 -133536791 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6779987 6780015 -133536750 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6782877 6782983 -133533782 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6783145 6783442 -133533323 - AluSg SINE Alu -13 297 1 204 97 0 0 chr10 6784070 6784101 -133532664 + (A)n Simple_repeat Simple_repeat 1 31 0 2733 232 58 8 chr10 6784321 6785474 -133531291 - L1ME LINE L1 -392 6052 4843 548 208 87 11 chr10 6785482 6785672 -133531093 - L1MDa LINE L1 -4755 1671 1357 22 0 0 0 chr10 6785728 6785750 -133531015 + AT_rich Low_complexity Low_complexity 1 22 0 1178 87 6 0 chr10 6786059 6786232 -133530533 + (TCTCC)n Simple_repeat Simple_repeat 2 175 0 216 0 0 0 chr10 6787089 6787113 -133529652 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6788642 6789175 -133527590 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6790491 6790839 -133525926 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6790871 6791045 -133525720 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6791413 6791533 -133525232 + AluSq/x SINE Alu 1 123 -190 243 0 0 0 chr10 6791533 6791560 -133525205 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6791560 6791572 -133525193 + AluSq/x SINE Alu 122 133 -180 1939 150 31 0 chr10 6792057 6792351 -133524414 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6792379 6792508 -133524257 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6793098 6793152 -133523613 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6793267 6793563 -133523202 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6793606 6793778 -133522987 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6793807 6793946 -133522819 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6793998 6794440 -133522325 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6795593 6795657 -133521108 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6796701 6797068 -133519697 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6797073 6797241 -133519524 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6797241 6797596 -133519169 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6797596 6797614 -133519151 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6797630 6797921 -133518844 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6797924 6797963 -133518802 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6798018 6798101 -133518664 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6798151 6798256 -133518509 - AluSg/x SINE Alu -17 295 190 7624 54 2 2 chr10 6798399 6799545 -133517220 + L1PA5 LINE L1 5008 6154 0 225 323 0 0 chr10 6800482 6800544 -133516221 + MIR3 SINE MIR 119 180 -28 11206 87 18 39 chr10 6800759 6803090 -133513675 - HERVH LTR ERV1 -5552 2161 1 3585 67 5 7 chr10 6803092 6803541 -133513224 - LTR7 LTR ERV1 -2 448 1 1011 265 75 131 chr10 6804225 6805150 -133511615 + Charlie2b DNA MER1_type 45 917 -1865 838 258 116 7 chr10 6805152 6805427 -133511338 - MLT1E3 LTR MaLR -3 621 317 622 60 66 18 chr10 6806242 6806409 -133510356 + (TA)n Simple_repeat Simple_repeat 1 175 0 632 222 146 0 chr10 6807214 6807385 -133509380 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6808809 6809048 -133507717 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6809106 6809286 -133507479 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6809293 6809366 -133507399 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6809350 6809469 -133507296 + L1MA1 LINE L1 4262 4375 -1771 * 379 252 52 0 chr10 6811431 6811546 -133505219 + L1MA1 LINE L1 5817 5937 -365 * 961 51 0 0 chr10 6811464 6811581 -133505184 + L1PB1 LINE L1 5856 5972 -179 7104 59 15 27 chr10 6811583 6812278 -133504487 + L1PA6 LINE L1 4774 5476 -678 2207 115 0 3 chr10 6812278 6812582 -133504183 + AluY SINE Alu 1 303 -8 7104 59 15 27 chr10 6812582 6812899 -133503866 + L1PA6 LINE L1 5476 5795 -359 2358 89 0 22 chr10 6812899 6813215 -133503550 + AluY SINE Alu 1 309 -2 7104 59 15 27 chr10 6813215 6813592 -133503173 + L1PA6 LINE L1 5795 6153 -1 303 239 44 44 chr10 6813899 6814012 -133502753 - MER103 DNA DNA -13 153 41 268 156 0 0 chr10 6814275 6814320 -133502445 + L1ME2 LINE L1 6015 6059 -105 392 274 0 9 chr10 6814357 6814463 -133502302 + L1ME2 LINE L1 6041 6145 -19 256 382 8 24 chr10 6814506 6814629 -133502136 - MIR SINE MIR -68 140 20 2361 87 3 3 chr10 6815664 6815973 -133500792 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6816288 6816310 -133500455 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6816310 6816488 -133500277 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 456 217 19 0 chr10 6816838 6816944 -133499821 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6817236 6817264 -133499501 + (T)n Simple_repeat Simple_repeat 1 28 0 2833 80 16 11 chr10 6818321 6818694 -133498071 - THE1C LTR MaLR 0 375 1 400 318 155 0 chr10 6818808 6818956 -133497809 - MER5A DNA MER1_type -6 183 13 291 327 158 0 chr10 6819244 6819409 -133497356 - MIR3 SINE MIR -6 202 12 2145 273 73 28 chr10 6820103 6820879 -133495886 + MER63C DNA MER1_type 1 811 -119 326 300 53 53 chr10 6820979 6821206 -133495559 - HAL1b LINE L1 -1061 287 61 575 286 12 30 chr10 6821792 6821960 -133494805 + MLT1F1 LTR MaLR 3 167 -375 857 229 74 44 chr10 6822053 6822404 -133494361 + MLT1F1 LTR MaLR 146 565 -2 2166 154 25 57 chr10 6822627 6822648 -133494117 - MLT1B LTR MaLR 0 390 370 2610 176 24 0 chr10 6822648 6823064 -133493701 + MSTB LTR MaLR 1 426 0 2166 154 25 57 chr10 6823064 6823445 -133493320 - MLT1B LTR MaLR -20 370 1 303 309 111 18 chr10 6824234 6824391 -133492374 - MIR3 SINE MIR -34 174 4 261 306 10 31 chr10 6824663 6824761 -133492004 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6825224 6825263 -133491502 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1858 132 0 0 chr10 6825265 6825516 -133491249 - AluSx SINE Alu -61 251 1 1114 60 13 40 chr10 6826325 6826474 -133490291 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6826482 6826507 -133490258 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1977 138 0 0 chr10 6826509 6826792 -133489973 - AluSq SINE Alu -30 283 1 216 289 70 51 chr10 6826815 6826971 -133489794 - MIR SINE MIR -45 217 59 384 40 0 0 chr10 6827980 6828030 -133488735 + (TG)n Simple_repeat Simple_repeat 2 51 0 771 231 129 0 chr10 6828817 6829003 -133487762 + MER58A DNA MER1_type 4 213 -11 1755 163 3 33 chr10 6829217 6829517 -133487248 - AluSx SINE Alu -17 295 5 3265 182 63 6 chr10 6829609 6830240 -133486525 - LTR65 LTR ERV1 0 669 3 896 119 0 22 chr10 6830705 6830839 -133485926 - L1PB4 LINE L1 0 6156 6026 3038 158 37 27 chr10 6830839 6831401 -133485364 - MER41B LTR ERV1 0 635 68 445 290 57 36 chr10 6831573 6831766 -133484999 - L2 LINE L2 -854 2460 2264 297 303 49 0 chr10 6831752 6831874 -133484891 - L2 LINE L2 -1198 2116 1989 * 4622 173 46 20 chr10 6831876 6833243 -133483522 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6833761 6834120 -133482645 + THE1B LTR MaLR 1 364 0 4548 108 14 47 chr10 6834550 6835293 -133481472 - L1PB1 LINE L1 -2 6149 5432 6683 223 68 103 chr10 6835295 6836788 -133479977 + Charlie6 DNA MER1_type 83 1628 -1872 511 270 0 0 chr10 6836788 6836903 -133479862 + FLAM_A SINE Alu 2 116 -17 2289 56 3 0 chr10 6836903 6837188 -133479577 - L1PA5 LINE L1 0 6154 5869 1381 138 0 0 chr10 6837193 6837396 -133479369 + AluSg/x SINE Alu 103 305 -5 6683 223 68 103 chr10 6837396 6838222 -133478543 + Charlie6 DNA MER1_type 1631 2521 -979 2681 188 70 4 chr10 6838284 6838799 -133477966 + MER21A LTR ERV1 383 931 0 2396 82 0 3 chr10 6838881 6839184 -133477581 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6839184 6839217 -133477548 - MER41C LTR ERV1 -521 33 1 310 161 118 21 chr10 6839217 6839310 -133477455 - L1PB4 LINE L1 -127 6029 5928 2581 122 0 3 chr10 6839724 6840076 -133476689 - THE1B LTR MaLR 0 364 14 383 143 16 0 chr10 6840064 6840127 -133476638 - THE1B LTR MaLR -300 64 1 * 617 211 44 3 chr10 6841512 6841681 -133475084 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6841747 6841776 -133474989 + (TG)n Simple_repeat Simple_repeat 1 29 0 1589 192 25 6 chr10 6841830 6842147 -133474618 + MLT1A1 LTR MaLR 1 323 -42 2344 96 60 16 chr10 6842703 6842723 -133474042 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6842723 6842744 -133474021 + (TA)n Simple_repeat Simple_repeat 1 21 0 2344 96 60 16 chr10 6842744 6843111 -133473654 + L1PB1 LINE L1 5779 6164 0 398 151 27 0 chr10 6843548 6843621 -133473144 - MER116 DNA Mariner 0 80 6 1875 118 63 76 chr10 6843641 6844021 -133472744 + THE1C LTR MaLR 1 375 0 1943 158 25 14 chr10 6844596 6844964 -133471801 - L1MB3 LINE L1 -2 6181 5810 2160 144 0 0 chr10 6845018 6845324 -133471441 + AluSx SINE Alu 1 306 -6 311 322 41 0 chr10 6845994 6846115 -133470650 - L2 LINE L2 -1 3271 3146 191 317 40 69 chr10 6846860 6847062 -133469703 - L2 LINE L2 -179 3093 2898 236 234 0 0 chr10 6847845 6847892 -133468873 + L1ME4a LINE L1 5986 6032 -89 1378 252 13 10 chr10 6849606 6850068 -133466697 - MER90 LTR ERV1 -6 569 57 2056 130 0 7 chr10 6850225 6850538 -133466227 + AluSx SINE Alu 1 311 0 2217 160 61 11 chr10 6850704 6851149 -133465616 - L1MA7 LINE L1 0 6291 5825 340 174 138 87 chr10 6851632 6851770 -133464995 - L1ME4a LINE L1 0 6121 5977 2073 121 4 0 chr10 6852504 6852803 -133463962 + AluSq SINE Alu 11 313 0 309 167 13 77 chr10 6853695 6853773 -133462992 + MER5A DNA MER1_type 69 141 -48 3965 164 39 1 chr10 6853799 6854495 -133462270 - L1PA16 LINE L1 -9 6157 5436 262 309 24 0 chr10 6855218 6855302 -133461463 - MIR SINE MIR -116 146 61 1060 113 0 7 chr10 6855731 6855882 -133460883 + FRAM SINE Alu 19 168 -8 181 194 104 0 chr10 6855986 6856053 -133460712 - MIR SINE MIR -133 129 56 439 219 75 78 chr10 6856222 6856613 -133460152 + MLT1H LTR MaLR 23 533 -16 2017 101 25 7 chr10 6858342 6858663 -133458102 + AluSq SINE Alu 1 326 0 341 344 81 18 chr10 6860873 6861094 -133455671 - MIR SINE MIR -2 260 26 1650 167 0 0 chr10 6861154 6861425 -133455340 - AluJo SINE Alu 0 306 36 1276 220 179 27 chr10 6861453 6861866 -133454899 - MER50 LTR ERV1 -19 715 240 284 264 195 0 chr10 6862600 6862687 -133454078 - MER50 LTR ERV1 -614 120 17 256 154 0 0 chr10 6863056 6863095 -133453670 + U2 snRNA snRNA 1 39 -149 418 284 16 0 chr10 6864080 6864207 -133452558 + MIR SINE MIR 47 175 -87 1197 104 12 0 chr10 6864611 6864775 -133451990 + AluSg/x SINE Alu 132 297 -13 2349 144 50 28 chr10 6864969 6865427 -133451338 - L1MB3 LINE L1 0 6183 5716 818 179 174 5 chr10 6865885 6866069 -133450696 - MER20 DNA MER1_type 0 219 5 3959 173 29 11 chr10 6866346 6866668 -133450097 + MER72 LTR ERV1 9 324 -398 2583 97 14 0 chr10 6866668 6867018 -133449747 + THE1A LTR MaLR 1 355 0 3959 173 29 11 chr10 6867018 6867396 -133449369 + MER72 LTR ERV1 324 721 -1 1891 250 65 55 chr10 6867413 6868101 -133448664 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6868111 6868189 -133448576 - MER21B LTR ERV1 -765 98 21 273 77 0 0 chr10 6868289 6868328 -133448437 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6868321 6868404 -133448361 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6868662 6868936 -133447829 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6869405 6869601 -133447164 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6870016 6870366 -133446399 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6870445 6870676 -133446089 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6871643 6871716 -133445049 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6871973 6872585 -133444180 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6872592 6872669 -133444096 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6872744 6872882 -133443883 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6873191 6873620 -133443145 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6873723 6874059 -133442706 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6874716 6875098 -133441667 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6875102 6875137 -133441628 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6875203 6875369 -133441396 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6875490 6875775 -133440990 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6876262 6876549 -133440216 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6877137 6877200 -133439565 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6877200 6877268 -133439497 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6877439 6877751 -133439014 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6877873 6877924 -133438841 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 287 82 25 chr10 6878176 6878298 -133438467 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6878779 6879230 -133437535 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6879230 6879610 -133437155 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6879608 6879824 -133436941 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6879825 6880487 -133436278 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6880489 6880992 -133435773 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6880982 6881132 -133435633 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6881111 6881880 -133434885 - HERVH LTR ERV1 -4718 2995 2241 262 280 206 0 chr10 6882502 6882609 -133434156 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6883522 6883606 -133433159 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6883615 6883982 -133432783 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6885129 6885325 -133431440 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6885870 6886151 -133430614 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6886154 6886180 -133430585 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6886231 6886324 -133430441 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6886883 6886931 -133429834 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6886931 6887071 -133429694 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6887071 6887499 -133429266 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6888491 6888522 -133428243 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6889167 6889504 -133427261 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6890072 6890855 -133425910 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6891032 6891144 -133425621 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6892058 6892256 -133424509 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6893485 6894240 -133422525 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6894372 6894490 -133422275 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6894729 6894985 -133421780 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6895205 6895356 -133421409 + MIR SINE MIR 51 192 -63 227 390 90 6 chr10 6896928 6897105 -133419660 + L2 LINE L2 3029 3220 -52 251 262 163 73 chr10 6897228 6897461 -133419304 + MLT1H LTR MaLR 97 350 -199 235 200 57 43 chr10 6897475 6897545 -133419220 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6897912 6898268 -133418497 + (TG)n Simple_repeat Simple_repeat 1 357 0 378 293 29 32 chr10 6899812 6900051 -133416714 + L1ME4a LINE L1 5668 5904 -217 1574 152 10 37 chr10 6900128 6900424 -133416341 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6900602 6900643 -133416122 + AT_rich Low_complexity Low_complexity 1 41 0 2433 67 0 29 chr10 6900956 6901272 -133415493 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6901412 6901440 -133415325 + AT_rich Low_complexity Low_complexity 1 28 0 2313 113 3 0 chr10 6902091 6902402 -133414363 + AluSx SINE Alu 1 312 0 1796 217 40 80 chr10 6902723 6903327 -133413438 + MLT1G LTR MaLR 11 590 0 1902 194 90 12 chr10 6904483 6904665 -133412100 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6904665 6904694 -133412071 + (CA)n Simple_repeat Simple_repeat 1 29 0 1902 194 90 12 chr10 6904694 6904943 -133411822 + MLT1C LTR MaLR 168 467 0 1527 97 60 0 chr10 6905294 6905511 -133411254 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6905769 6905857 -133410908 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6905857 6906040 -133410725 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2012 123 20 3 chr10 6906056 6906348 -133410417 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6907496 6907530 -133409235 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 286 303 73 0 chr10 6907531 6907640 -133409125 - L2 LINE L2 -15 3298 3182 368 265 20 0 chr10 6908937 6909035 -133407730 + L2 LINE L2 3214 3313 0 2184 123 7 0 chr10 6909864 6910173 -133406592 - AluSx SINE Alu 0 312 2 2302 176 31 12 chr10 6910415 6910840 -133405925 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6911384 6911567 -133405198 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6911576 6911681 -133405084 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6911825 6911874 -133404891 + GA-rich Low_complexity Low_complexity 4 52 0 2045 152 44 46 chr10 6912240 6912790 -133403975 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6913776 6913802 -133402963 + (A)n Simple_repeat Simple_repeat 1 26 0 1458 40 10 25 chr10 6914072 6914274 -133402491 + HERVH LTR ERV1 7515 7713 0 3586 51 0 7 chr10 6914274 6914725 -133402040 + LTR7 LTR ERV1 1 448 -2 2635 184 59 0 chr10 6915239 6915765 -133401000 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6916251 6916303 -133400462 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1235 75 0 0 chr10 6916304 6916464 -133400301 - L1PA14 LINE L1 -4 6157 5998 283 189 0 54 chr10 6916468 6916542 -133400223 + C-rich Low_complexity Low_complexity 6 75 0 344 180 0 72 chr10 6916548 6916742 -133400023 + CT-rich Low_complexity Low_complexity 1 180 0 4525 106 14 105 chr10 6916874 6917758 -133399007 - HERVH LTR ERV1 -6910 803 1 3544 60 0 7 chr10 6917760 6918211 -133398554 - LTR7 LTR ERV1 -2 448 1 232 299 154 0 chr10 6918231 6918348 -133398417 - L2 LINE L2 0 3313 3179 205 306 56 0 chr10 6918902 6918974 -133397791 - MIR3 SINE MIR -48 160 85 44711 44 2 2 chr10 6919401 6925559 -133391206 - L1PA3 LINE L1 0 6155 1 300 331 174 20 chr10 6925998 6926354 -133390411 + L2 LINE L2 2201 2611 -703 213 39 0 0 chr10 6927420 6927446 -133389319 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1824 167 3 19 chr10 6927465 6927782 -133388983 - AluJb SINE Alu 0 312 1 21 71 0 0 chr10 6929449 6929491 -133387274 + AT_rich Low_complexity Low_complexity 1 42 0 336 302 47 9 chr10 6930111 6930259 -133386506 + MIR SINE MIR 8 161 -47 181 156 0 0 chr10 6931093 6931125 -133385640 - MER5A DNA MER1_type -114 75 44 726 96 0 0 chr10 6931798 6931902 -133384863 + (T)n Simple_repeat Simple_repeat 1 104 0 2267 118 3 3 chr10 6932343 6932729 -133384036 - AluSq SINE Alu 0 386 1 288 297 77 39 chr10 6932894 6933076 -133383689 + MIR SINE MIR 20 208 -54 2058 149 0 0 chr10 6933246 6933548 -133383217 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6934714 6934833 -133381932 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6935325 6935519 -133381246 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6936581 6936656 -133380109 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6936661 6936965 -133379800 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6936984 6937224 -133379541 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6937234 6937336 -133379429 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6937974 6938190 -133378575 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6938625 6938910 -133377855 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6938920 6939004 -133377761 + AluJ/FLAM SINE Alu 1 91 -221 366 287 36 24 chr10 6939402 6939569 -133377196 + MER117 DNA MER1_type 22 190 -7 270 252 6 107 chr10 6939727 6939886 -133376879 + L1ME4a LINE L1 5577 5719 -402 989 201 22 45 chr10 6939939 6940163 -133376602 - MER20 DNA MER1_type 0 219 1 2245 265 47 24 chr10 6940650 6941436 -133375329 - L1MEc LINE L1 -5554 842 39 324 292 163 25 chr10 6941437 6941677 -133375088 + L1ME4a LINE L1 5698 5970 -151 287 273 18 0 chr10 6941681 6941791 -133374974 + (TA)n Simple_repeat Simple_repeat 2 113 0 1938 113 46 0 chr10 6942016 6942299 -133374466 - AluSx SINE Alu -16 296 1 1882 31 18 0 chr10 6942780 6943007 -133373758 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6943129 6943307 -133373458 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6943320 6943606 -133373159 + (CA)n Simple_repeat Simple_repeat 1 279 0 1169 215 80 43 chr10 6944362 6944799 -133371966 + L1ME2 LINE L1 5698 6150 -14 577 221 124 0 chr10 6945286 6945431 -133371334 - MIR SINE MIR -42 220 58 465 290 45 0 chr10 6945535 6945690 -133371075 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6945695 6945727 -133371038 + AT_rich Low_complexity Low_complexity 1 32 0 314 341 39 8 chr10 6945787 6945916 -133370849 - L3b LINE CR1 -6 1577 1445 875 266 63 47 chr10 6947548 6948209 -133368556 + L1M4 LINE L1 4037 4708 -1438 210 309 0 59 chr10 6948327 6948395 -133368370 + L2 LINE L2 3202 3265 -7 263 268 28 0 chr10 6949217 6949288 -133367477 - MLT1J LTR MaLR -335 176 104 241 122 92 37 chr10 6949638 6949725 -133367040 + L1ME4a LINE L1 5279 5372 -808 465 19 0 0 chr10 6950589 6950643 -133366122 + (CA)n Simple_repeat Simple_repeat 2 55 0 566 219 7 15 chr10 6950734 6950871 -133365894 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6951097 6951135 -133365630 + (TC)n Simple_repeat Simple_repeat 1 39 0 457 256 50 33 chr10 6951256 6951498 -133365267 + L1ME4a LINE L1 5671 5916 -205 916 150 0 0 chr10 6952413 6952566 -133364199 + L1PA14 LINE L1 5819 5971 -190 1013 114 0 0 chr10 6952666 6952833 -133363932 - HERVH LTR ERV1 -1947 5766 5600 4019 143 9 1 chr10 6952834 6953491 -133363274 - HERVH LTR ERV1 -2564 5149 4488 2990 130 0 12 chr10 6953493 6953993 -133362772 - HERVH LTR ERV1 -3720 3993 3500 861 140 7 0 chr10 6953992 6954142 -133362623 - HERVH LTR ERV1 -4423 3290 3140 * 14192 84 11 17 chr10 6954121 6956289 -133360476 - HERVH LTR ERV1 -4718 2995 841 24 0 0 0 chr10 6956422 6956446 -133360319 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6956754 6956823 -133359942 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6956846 6957814 -133358951 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6957814 6957909 -133358856 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6957909 6959569 -133357196 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6959814 6965341 -133351424 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6965341 6966309 -133350456 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6966693 6966773 -133349992 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6967035 6967171 -133349594 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6967206 6967226 -133349539 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6967444 6967613 -133349152 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6967608 6967787 -133348978 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6967759 6967939 -133348826 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6967957 6968136 -133348629 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6968203 6968370 -133348395 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6968386 6968544 -133348221 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6968564 6968744 -133348021 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6968769 6968950 -133347815 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6968965 6969055 -133347710 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6969066 6969424 -133347341 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6969494 6969654 -133347111 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6969669 6969847 -133346918 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6969849 6969937 -133346828 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6970663 6970781 -133345984 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6971793 6971873 -133344892 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6971910 6972109 -133344656 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6973463 6973556 -133343209 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6974723 6975140 -133341625 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6975312 6975526 -133341239 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6976501 6976579 -133340186 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6977340 6977549 -133339216 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6977567 6978515 -133338250 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6978515 6978644 -133338121 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6978644 6979024 -133337741 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6979052 6979276 -133337489 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6979712 6979887 -133336878 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6979912 6980233 -133336532 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6980373 6980654 -133336111 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6981021 6981331 -133335434 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6981611 6982352 -133334413 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6982410 6982574 -133334191 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6982577 6982683 -133334082 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6982684 6982937 -133333828 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6982939 6983052 -133333713 + Tigger3(Golem) DNA MER2_type 2766 2879 -150 22 0 0 0 chr10 6983433 6983455 -133333310 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6983934 6984009 -133332756 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6984616 6984896 -133331869 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6984896 6984924 -133331841 + (TA)n Simple_repeat Simple_repeat 2 29 0 354 259 49 63 chr10 6985754 6985897 -133330868 - MIR SINE MIR -55 207 67 2135 118 7 0 chr10 6986051 6986347 -133330418 + AluSq SINE Alu 1 298 -15 330 204 120 0 chr10 6986444 6986552 -133330213 - L1ME4a LINE L1 -41 6080 5960 2153 165 14 6 chr10 6986670 6987033 -133329732 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6987033 6987081 -133329684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2352 166 8 26 chr10 6987085 6987737 -133329028 - L1MB1 LINE L1 -503 5665 5025 629 309 4 12 chr10 6987739 6987985 -133328780 - L1ME4a LINE L1 -295 5826 5583 261 259 17 0 chr10 6989013 6989071 -133327694 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6989096 6989181 -133327584 + MIR SINE MIR 1 91 -171 209 311 30 52 chr10 6989234 6989369 -133327396 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6989768 6989823 -133326942 + (TG)n Simple_repeat Simple_repeat 2 56 0 225 308 13 26 chr10 6990573 6990651 -133326114 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6990718 6990739 -133326026 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1046 25 0 17 chr10 6990771 6990891 -133325874 - L1PA3 LINE L1 -1 6154 6037 23620 27 0 0 chr10 6990891 6994264 -133322501 + L1PA2 LINE L1 2643 6057 -98 3389 200 56 50 chr10 6994288 6995237 -133321528 - L1MC3 LINE L1 -7 7778 6824 818 197 167 78 chr10 6995485 6995940 -133320825 - MER66A LTR ERV1 -52 443 100 578 215 0 0 chr10 6996414 6996521 -133320244 - MER5A DNA MER1_type -82 107 1 287 363 108 20 chr10 6997008 6997212 -133319553 - L2 LINE L2 -1 3271 3050 2355 109 3 0 chr10 6997302 6997614 -133319151 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6998796 6998844 -133317921 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6999082 6999264 -133317501 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6999268 6999325 -133317440 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 7001512 7001822 -133314943 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 7001844 7002223 -133314542 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 7002223 7002525 -133314240 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 7002525 7002562 -133314203 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 7003221 7003308 -133313457 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 7003706 7003985 -133312780 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 7004370 7004783 -133311982 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 7005038 7005169 -133311596 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 7005262 7005347 -133311418 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 7005799 7005868 -133310897 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 7006169 7006283 -133310482 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 7006305 7006602 -133310163 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 7007325 7007364 -133309401 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 7007449 7007560 -133309205 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 7008473 7008753 -133308012 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 7008755 7008793 -133307972 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 7008806 7009398 -133307367 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 7010686 7010841 -133305924 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 7011418 7011725 -133305040 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 7012347 7012435 -133304330 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 7013206 7013496 -133303269 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 7013794 7013907 -133302858 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 7014578 7014867 -133301898 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 7015718 7015829 -133300936 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 7015829 7016137 -133300628 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 7016137 7016500 -133300265 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 7017070 7017139 -133299626 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 7017144 7017339 -133299426 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 7017691 7017842 -133298923 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 7017842 7018149 -133298616 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 7018149 7018220 -133298545 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 7018436 7018608 -133298157 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 7018608 7018945 -133297820 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 7018945 7018991 -133297774 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 7019125 7019350 -133297415 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 7019350 7019434 -133297331 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 7019894 7019989 -133296776 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 7020132 7020227 -133296538 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7021141 7021301 -133295464 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7021322 7021484 -133295281 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7021484 7021508 -133295257 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7021607 7021662 -133295103 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7021664 7022234 -133294531 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7022239 7022717 -133294048 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7022725 7022798 -133293967 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7022798 7022908 -133293857 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7023714 7023963 -133292802 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7023963 7024051 -133292714 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7024060 7024271 -133292494 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7024248 7024679 -133292086 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7025418 7025438 -133291327 + (T)n Simple_repeat Simple_repeat 1 20 0 304 21 0 62 chr10 7025627 7025675 -133291090 - FLAM_A SINE Alu 0 133 89 886 165 0 0 chr10 7025691 7025824 -133290941 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7026372 7026481 -133290284 - MER91A DNA MER1_type -25 171 55 200 196 0 18 chr10 7026948 7027004 -133289761 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7027022 7027130 -133289635 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7027112 7027638 -133289127 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7028235 7028269 -133288496 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7028269 7028580 -133288185 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7028580 7028735 -133288030 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7028735 7029033 -133287732 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7029033 7029114 -133287651 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7029275 7029589 -133287176 + AluSx SINE Alu 1 302 -10 963 53 38 0 chr10 7029833 7029965 -133286800 - AluSc SINE Alu -172 137 1 681 146 18 9 chr10 7030781 7030891 -133285874 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7030895 7031453 -133285312 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7031453 7031755 -133285010 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7031755 7032208 -133284557 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7032200 7032420 -133284345 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7032426 7032747 -133284018 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7032942 7033025 -133283740 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7033235 7033262 -133283503 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7033327 7033699 -133283066 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7034187 7034222 -133282543 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7034592 7034750 -133282015 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7034819 7034967 -133281798 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7035025 7035617 -133281148 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7035630 7035781 -133280984 - MER63 DNA MER1_type -282 780 6 949 192 0 0 chr10 7036702 7036853 -133279912 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7036911 7036938 -133279827 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7037122 7037315 -133279450 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7037376 7037770 -133278995 - MLT1B LTR MaLR -1 389 1 2167 130 0 0 chr10 7038210 7038510 -133278255 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7038813 7038888 -133277877 + MIR SINE MIR 189 262 0 828 131 28 7 chr10 7039122 7039267 -133277498 + AluSc SINE Alu 154 301 -8 256 310 207 19 chr10 7039387 7039600 -133277165 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7040230 7040737 -133276028 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7040755 7040908 -133275857 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7040990 7041018 -133275747 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7041261 7041678 -133275087 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7041678 7041991 -133274774 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7041991 7042062 -133274703 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7042062 7043208 -133273557 + L1PA3 LINE L1 4812 5961 -194 664 53 0 0 chr10 7043309 7043384 -133273381 - AluY SINE Alu -234 84 10 690 198 52 66 chr10 7043384 7043596 -133273169 - MER39 LTR ERV1 -106 601 393 646 164 68 41 chr10 7045214 7045265 -133271500 - MER39 LTR ERV1 0 707 659 2684 163 19 0 chr10 7045265 7045683 -133271082 + MSTB LTR MaLR 1 426 0 646 164 68 41 chr10 7045683 7045777 -133270988 - MER39 LTR ERV1 -48 659 558 463 321 77 47 chr10 7046014 7046756 -133270009 - L1M4 LINE L1 -1699 4447 3684 354 295 75 15 chr10 7046866 7047066 -133269699 - L1M4 LINE L1 -2806 3340 3129 534 161 200 89 chr10 7047243 7047392 -133269373 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7047392 7047691 -133269074 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7047691 7047721 -133269044 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7047841 7047919 -133268846 + (TA)n Simple_repeat Simple_repeat 2 83 0 558 309 140 14 chr10 7049182 7049460 -133267305 + L3b LINE CR1 1171 1483 -100 2394 196 152 26 chr10 7049684 7050520 -133266245 - LTR28 LTR ERV1 0 1020 3 411 294 13 20 chr10 7051611 7051764 -133265001 + L1MC4a LINE L1 5791 5942 -1866 22 0 0 0 chr10 7051935 7051957 -133264808 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 7052021 7052044 -133264721 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2287 85 0 7 chr10 7052143 7052448 -133264317 - AluSc SINE Alu -6 303 1 2211 117 7 7 chr10 7053637 7053946 -133262819 - AluSx SINE Alu -3 309 1 222 309 47 81 chr10 7053998 7054110 -133262655 - L3 LINE CR1 -2 1575 1468 1637 202 125 46 chr10 7054110 7054590 -133262175 + MLT2B1 LTR ERVL 1 518 -2 222 309 47 81 chr10 7054590 7054626 -133262139 - L3 LINE CR1 -109 1468 1432 884 324 57 0 chr10 7054889 7055225 -133261540 + L2 LINE L2 2018 2372 -942 890 136 8 0 chr10 7055234 7055366 -133261399 + MER4A LTR ERV1 532 664 0 182 304 62 96 chr10 7055397 7055637 -133261128 + L2 LINE L2 2933 3164 -108 297 244 62 62 chr10 7056935 7057095 -133259670 - MIR SINE MIR -55 207 48 642 40 20 10 chr10 7057881 7057980 -133258785 + (TC)n Simple_repeat Simple_repeat 1 100 0 410 304 89 54 chr10 7058124 7058223 -133258542 - MIR SINE MIR 0 262 168 197 65 32 0 chr10 7058223 7058254 -133258511 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7058254 7058378 -133258387 - MIR SINE MIR -94 168 31 339 348 108 54 chr10 7059137 7059508 -133257257 - L2 LINE L2 -8 3264 2874 337 130 0 26 chr10 7059512 7059589 -133257176 + (TG)n Simple_repeat Simple_repeat 2 76 0 3687 244 64 24 chr10 7059735 7059848 -133256917 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7059848 7060116 -133256649 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7060116 7060359 -133256406 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7060359 7060725 -133256040 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7060725 7062317 -133254448 + L1ME2 LINE L1 4484 6164 0 843 300 80 34 chr10 7062740 7063354 -133253411 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7063403 7063840 -133252925 + AluSx SINE Alu 1 440 0 289 336 55 23 chr10 7065269 7065397 -133251368 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7065447 7065751 -133251014 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7065760 7066061 -133250704 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7066679 7066700 -133250065 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7067003 7067526 -133249239 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7067673 7067733 -133249032 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7068417 7068484 -133248281 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7068762 7070407 -133246358 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7070407 7070429 -133246336 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7070429 7070788 -133245977 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7070805 7071375 -133245390 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7071560 7071992 -133244773 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7072351 7072553 -133244212 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7072553 7072916 -133243849 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7072916 7073104 -133243661 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7073525 7073598 -133243167 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7074990 7075223 -133241542 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7076192 7076403 -133240362 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7076429 7076762 -133240003 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7077601 7078092 -133238673 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7078239 7078282 -133238483 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7079816 7080028 -133236737 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7080125 7080239 -133236526 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7081354 7081521 -133235244 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7081791 7081814 -133234951 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7082030 7082296 -133234469 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7083436 7083506 -133233259 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7083513 7083628 -133233137 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7083656 7084117 -133232648 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7085467 7085783 -133230982 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7085976 7086256 -133230509 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7086311 7086436 -133230329 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7086436 7086794 -133229971 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7086794 7087060 -133229705 + MLT1A1 LTR MaLR 133 365 0 245 294 0 9 chr10 7087232 7087341 -133229424 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7087563 7087934 -133228831 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7089648 7089836 -133226929 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7089845 7091435 -133225330 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7091435 7091568 -133225197 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7091568 7091934 -133224831 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7092090 7092278 -133224487 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7093774 7094272 -133222493 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7094276 7094626 -133222139 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7095984 7096181 -133220584 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7097189 7097344 -133219421 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7097469 7097513 -133219252 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7097509 7097606 -133219159 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7097585 7097650 -133219115 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7098453 7098605 -133218160 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7098649 7099061 -133217704 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7100743 7100808 -133215957 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7100970 7101071 -133215694 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7101264 7101684 -133215081 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7101707 7102205 -133214560 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7102338 7102500 -133214265 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7102541 7102710 -133214055 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7103481 7103738 -133213027 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7103740 7103788 -133212977 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7103788 7104086 -133212679 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7104086 7104159 -133212606 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7104392 7104614 -133212151 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7105070 7105261 -133211504 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7105860 7106125 -133210640 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7106200 7106251 -133210514 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7106262 7106818 -133209947 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7106965 7107013 -133209752 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7108370 7108417 -133208348 + Tigger7 DNA MER2_type 64 111 -2376 2441 79 0 0 chr10 7108417 7108721 -133208044 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7108721 7108882 -133207883 + Tigger7 DNA MER2_type 111 267 -2220 487 209 0 0 chr10 7108879 7108970 -133207795 + Tigger7 DNA MER2_type 2488 2578 -9 * 228 67 0 0 chr10 7110543 7110573 -133206192 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7110606 7110812 -133205953 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7110816 7111005 -133205760 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7111270 7111543 -133205222 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7111933 7112230 -133204535 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7112845 7113129 -133203636 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7113154 7113269 -133203496 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7113358 7113525 -133203240 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7113528 7113614 -133203151 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7113614 7113904 -133202861 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7113904 7114260 -133202505 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7114258 7114333 -133202432 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7114333 7114959 -133201806 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7114959 7115241 -133201524 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7115241 7115637 -133201128 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7115637 7115957 -133200808 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7115957 7116122 -133200643 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7116122 7116229 -133200536 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7116247 7117301 -133199464 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7117365 7118391 -133198374 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7118474 7118592 -133198173 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7119890 7120003 -133196762 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7120241 7120268 -133196497 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7120268 7120601 -133196164 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7122824 7123065 -133193700 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7123619 7124028 -133192737 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7124078 7124149 -133192616 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7124190 7124500 -133192265 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7124518 7124651 -133192114 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7125037 7125377 -133191388 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7125809 7125897 -133190868 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7126022 7126187 -133190578 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7126902 7127754 -133189011 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7127754 7128014 -133188751 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7130853 7130995 -133185770 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7131085 7131233 -133185532 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7131242 7132392 -133184373 + HSMAR1 DNA Mariner 1 1136 -151 1503 118 9 0 chr10 7132493 7132713 -133184052 + HSMAR1 DNA Mariner 1061 1282 -5 2077 281 63 23 chr10 7132716 7133270 -133183495 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7133270 7133305 -133183460 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7133305 7133342 -133183423 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7133342 7133698 -133183067 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7133698 7133999 -133182766 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7134645 7134845 -133181920 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7135831 7135860 -133180905 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7136288 7136450 -133180315 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7137065 7137270 -133179495 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7138125 7138166 -133178599 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7138222 7138382 -133178383 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7138979 7139111 -133177654 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7139122 7139366 -133177399 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7139925 7140042 -133176723 + MIR SINE MIR 25 144 -64 2995 262 37 39 chr10 7141279 7142459 -133174306 + L1MA9 LINE L1 42 1223 -5883 2486 160 3 0 chr10 7142459 7142822 -133173943 - THE1B LTR MaLR 0 364 1 2995 262 37 39 chr10 7142822 7143563 -133173202 + L1MA9 LINE L1 1223 1964 -5142 228 67 0 0 chr10 7143563 7143593 -133173172 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 262 37 39 chr10 7143593 7143609 -133173156 + L1MA9 LINE L1 1964 1979 -5127 2170 112 0 0 chr10 7143609 7143894 -133172871 - AluSg SINE Alu -25 285 1 2995 262 37 39 chr10 7143894 7144583 -133172182 + L1MA9 LINE L1 1979 2668 -4438 2261 114 16 0 chr10 7144583 7144891 -133171874 + AluSp SINE Alu 1 313 0 2995 262 37 39 chr10 7144891 7145766 -133170999 + L1MA9 LINE L1 2668 4135 -2971 4853 164 53 46 chr10 7145853 7146648 -133170117 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7146648 7147058 -133169707 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7147058 7147252 -133169513 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7147252 7147562 -133169203 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7147562 7148344 -133168421 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7148346 7148669 -133168096 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7148669 7148979 -133167786 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7148979 7149110 -133167655 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7149129 7149343 -133167422 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7149623 7149829 -133166936 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7150964 7151128 -133165637 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7151261 7151646 -133165119 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7152375 7152741 -133164024 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7153226 7153604 -133163161 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7154021 7154206 -133162559 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7154439 7154744 -133162021 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7154828 7155617 -133161148 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7156318 7156513 -133160252 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7156597 7156778 -133159987 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7156754 7156859 -133159906 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7157810 7158158 -133158607 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7158843 7159675 -133157090 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7159690 7159826 -133156939 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7159850 7160024 -133156741 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7160144 7160670 -133156095 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7161981 7162351 -133154414 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7162423 7162557 -133154208 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7162647 7162885 -133153880 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7162904 7162992 -133153773 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7163807 7163976 -133152789 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7164295 7164591 -133152174 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7164600 7165057 -133151708 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7165057 7165191 -133151574 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7166074 7166246 -133150519 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7166290 7166332 -133150433 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7166545 7166566 -133150199 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7166566 7166819 -133149946 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7167176 7167272 -133149493 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7167312 7167463 -133149302 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7167610 7167681 -133149084 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7170391 7170737 -133146028 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7171319 7171603 -133145162 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7171603 7171745 -133145020 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7171745 7172041 -133144724 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7172041 7172224 -133144541 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7172224 7172517 -133144248 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7172764 7173124 -133143641 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7173954 7174041 -133142724 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7174142 7174384 -133142381 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7174384 7174969 -133141796 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7174969 7175163 -133141602 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7175720 7175864 -133140901 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7175886 7176000 -133140765 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7176491 7176678 -133140087 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7176937 7177106 -133139659 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7177183 7177446 -133139319 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7177535 7177768 -133138997 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7177913 7177983 -133138782 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7178623 7178684 -133138081 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7178684 7179039 -133137726 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7179039 7179584 -133137181 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7179584 7179885 -133136880 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7179885 7179916 -133136849 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7179920 7179960 -133136805 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7180358 7180638 -133136127 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7180639 7180710 -133136055 + AluS SINE Alu 16 86 -226 300 70 0 0 chr10 7180723 7180766 -133135999 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7180766 7186187 -133130578 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7186154 7186252 -133130513 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7186323 7186464 -133130301 - MIR SINE MIR -72 190 48 1834 155 0 24 chr10 7187406 7187706 -133129059 + AluSx SINE Alu 11 293 -19 1956 71 0 4 chr10 7187711 7187958 -133128807 + AluY SINE Alu 46 289 -22 382 22 0 0 chr10 7187958 7188004 -133128761 + (TAAAA)n Simple_repeat Simple_repeat 5 180 0 894 110 26 39 chr10 7188250 7188367 -133128398 - Charlie3 DNA MER1_type 0 2702 2586 2177 121 0 7 chr10 7188367 7188664 -133128101 - AluSq SINE Alu -16 297 3 894 110 26 39 chr10 7188664 7188701 -133128064 - Charlie3 DNA MER1_type -116 2586 2550 319 43 0 0 chr10 7188712 7188759 -133128006 + Charlie3 DNA MER1_type 2529 2575 -135 * 2295 117 32 36 chr10 7188725 7189136 -133127629 - MER1A DNA MER1_type -120 409 1 1679 46 0 46 chr10 7189153 7189370 -133127395 + AluY SINE Alu 105 311 0 1931 172 0 16 chr10 7190151 7190465 -133126300 - AluJb SINE Alu -3 309 1 1247 134 0 0 chr10 7190818 7190997 -133125768 - AluYa5 SINE Alu 0 311 133 2877 179 39 7 chr10 7191001 7191391 -133125374 - L1MB2 LINE L1 0 6171 5756 2513 77 0 3 chr10 7191391 7191701 -133125064 - AluY SINE Alu -2 309 1 2877 179 39 7 chr10 7191701 7191880 -133124885 - L1MB2 LINE L1 -415 5756 5584 1496 266 113 43 chr10 7192156 7193074 -133123691 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7193726 7193765 -133123000 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7194504 7194691 -133122074 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7194691 7194735 -133122030 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7194735 7195386 -133121379 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7195357 7196333 -133120432 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7196980 7197026 -133119739 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7197505 7197665 -133119100 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7197829 7197990 -133118775 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7198107 7198526 -133118239 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7198539 7198970 -133117795 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7200602 7200789 -133115976 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7200829 7201036 -133115729 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7201290 7201605 -133115160 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7201610 7201991 -133114774 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7201999 7202259 -133114506 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7202814 7203237 -133113528 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7203386 7203442 -133113323 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7203982 7204195 -133112570 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7204431 7204734 -133112031 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7205103 7205396 -133111369 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7206520 7206664 -133110101 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7206732 7206989 -133109776 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7207502 7207775 -133108990 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7208544 7208604 -133108161 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7209039 7209108 -133107657 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7209186 7209351 -133107414 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7209386 7209423 -133107342 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7209549 7209828 -133106937 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7209832 7209972 -133106793 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7210071 7210354 -133106411 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7210513 7210829 -133105936 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7210858 7210955 -133105810 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7210955 7211244 -133105521 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7211244 7211381 -133105384 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7211381 7211683 -133105082 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7211683 7212006 -133104759 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7212006 7212349 -133104416 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7212349 7212374 -133104391 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7212418 7212731 -133104034 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7213238 7213354 -133103411 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7213809 7213964 -133102801 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7214082 7214095 -133102670 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7214095 7214269 -133102496 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7214269 7214351 -133102414 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7214493 7215305 -133101460 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7215310 7215634 -133101131 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7215696 7216045 -133100720 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7216835 7217271 -133099494 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7217329 7217799 -133098966 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7217848 7218031 -133098734 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7218032 7218177 -133098588 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7218568 7218592 -133098173 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7219064 7219427 -133097338 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7219441 7219531 -133097234 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7219531 7219821 -133096944 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7219821 7219907 -133096858 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7220522 7220719 -133096046 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7220721 7221028 -133095737 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7221945 7222222 -133094543 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7222225 7222535 -133094230 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7222554 7222741 -133094024 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7222814 7222983 -133093782 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7224223 7224383 -133092382 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7224792 7224891 -133091874 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7225180 7225325 -133091440 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7226173 7226261 -133090504 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7226551 7227035 -133089730 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7227221 7227380 -133089385 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7227965 7228284 -133088481 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7229020 7229074 -133087691 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7230367 7230506 -133086259 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7230718 7230771 -133085994 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7231781 7231812 -133084953 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7231934 7232144 -133084621 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7232317 7232428 -133084337 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7233601 7233688 -133083077 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7234155 7234325 -133082440 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7235100 7235149 -133081616 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7235210 7236232 -133080533 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7236346 7236501 -133080264 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7237207 7237584 -133079181 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7238979 7240020 -133076745 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7240065 7240123 -133076642 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7240145 7240281 -133076484 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7240724 7240903 -133075862 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7240906 7241220 -133075545 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7241490 7241841 -133074924 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7241841 7242072 -133074693 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7242072 7242932 -133073833 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7243799 7244017 -133072748 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7244639 7244940 -133071825 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7245039 7245113 -133071652 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7245618 7245917 -133070848 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7246481 7246601 -133070164 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7246652 7246790 -133069975 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7246937 7246995 -133069770 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7247576 7247888 -133068877 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7248501 7248693 -133068072 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7248861 7249014 -133067751 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7249420 7249510 -133067255 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7251102 7251411 -133065354 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7252564 7252695 -133064070 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7252851 7253149 -133063616 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7253151 7253191 -133063574 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7253191 7253512 -133063253 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7253653 7253794 -133062971 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7253794 7254107 -133062658 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7254107 7254431 -133062334 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7254918 7254949 -133061816 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7254950 7255245 -133061520 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7256089 7256296 -133060469 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7256583 7256881 -133059884 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7257449 7257488 -133059277 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7257552 7257592 -133059173 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7257925 7258170 -133058595 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7258167 7258388 -133058377 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7259181 7259269 -133057496 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7260262 7260288 -133056477 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7260518 7260752 -133056013 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7261327 7261519 -133055246 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7261708 7261934 -133054831 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7262822 7262845 -133053920 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7263017 7263372 -133053393 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7263394 7263713 -133053052 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7263713 7264030 -133052735 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7264853 7265048 -133051717 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7265048 7265083 -133051682 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7265083 7265204 -133051561 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7265288 7265425 -133051340 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7265959 7266025 -133050740 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7266025 7266324 -133050441 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7266324 7266408 -133050357 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7266514 7266777 -133049988 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7267025 7267119 -133049646 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7267344 7267644 -133049121 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7267685 7267927 -133048838 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7268096 7268128 -133048637 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7268132 7268271 -133048494 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7268298 7268357 -133048408 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7268497 7268941 -133047824 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7269108 7269222 -133047543 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7269332 7269488 -133047277 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7269710 7270014 -133046751 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7270344 7275945 -133040820 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7275945 7276087 -133040678 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7276235 7276423 -133040342 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7276681 7276935 -133039830 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7277232 7277399 -133039366 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7277399 7277626 -133039139 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7277833 7277871 -133038894 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7278988 7279092 -133037673 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7280078 7280130 -133036635 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7280130 7280558 -133036207 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7280559 7280627 -133036138 - MER81 DNA DNA -45 69 2 376 259 17 52 chr10 7330745 7330861 -132985904 + L2 LINE L2 3199 3310 -3 264 368 22 22 chr10 7332687 7332869 -132983896 - L1ME LINE L1 -520 5601 5420 407 285 166 51 chr10 7333213 7333743 -132983022 - L1ME4a LINE L1 -5 6116 5526 279 276 25 107 chr10 7334976 7335028 -132981737 - MIR3 SINE MIR -8 200 145 2055 129 3 13 chr10 7335028 7335339 -132981426 - AluSg SINE Alu 0 310 3 279 276 25 107 chr10 7335339 7335482 -132981283 - MIR3 SINE MIR -63 145 21 23 0 0 0 chr10 7335951 7335974 -132980791 + AT_rich Low_complexity Low_complexity 1 23 0 2178 121 7 0 chr10 7335975 7336280 -132980485 + AluSg SINE Alu 1 307 -3 740 153 7 0 chr10 7336466 7336603 -132980162 + GA-rich Low_complexity Low_complexity 2 139 0 26 0 0 0 chr10 7336885 7336911 -132979854 + AT_rich Low_complexity Low_complexity 1 26 0 733 199 283 22 chr10 7338275 7338551 -132978214 - MER7A DNA MER2_type 0 346 1 607 271 21 0 chr10 7339019 7339163 -132977602 - L1ME LINE L1 -5573 497 351 27 0 0 0 chr10 7340527 7340554 -132976211 + AT_rich Low_complexity Low_complexity 1 27 0 1999 256 40 75 chr10 7340554 7341336 -132975429 + L1ME1 LINE L1 10 763 -5307 752 233 33 11 chr10 7341350 7341530 -132975235 + MER5A DNA MER1_type 1 184 -5 691 219 120 9 chr10 7341534 7341786 -132974979 + L1ME1 LINE L1 772 1045 -5035 1451 231 33 3 chr10 7341825 7342128 -132974637 + L1ME1 LINE L1 5260 5571 -529 1121 146 0 0 chr10 7342145 7342316 -132974449 + MLT1B LTR MaLR 1 171 -219 1932 123 49 7 chr10 7342320 7342604 -132974161 + AluSg SINE Alu 1 296 -14 1136 200 5 0 chr10 7342734 7342939 -132973826 + MLT1B LTR MaLR 185 390 0 935 234 65 27 chr10 7342941 7343202 -132973563 + L1ME1 LINE L1 5599 5869 -231 532 231 41 81 chr10 7343284 7343505 -132973260 + L1ME1 LINE L1 5869 6080 -20 232 233 29 29 chr10 7343525 7343628 -132973137 + A-rich Low_complexity Low_complexity 2 104 0 443 100 0 0 chr10 7343688 7343748 -132973017 - Alu SINE Alu -8 302 243 85 47 0 0 chr10 7343856 7343983 -132972782 + AT_rich Low_complexity Low_complexity 1 127 0 23 78 0 0 chr10 7344063 7344114 -132972651 + AT_rich Low_complexity Low_complexity 1 51 0 207 127 48 0 chr10 7344382 7344445 -132972320 + (TA)n Simple_repeat Simple_repeat 1 66 0 1221 180 0 14 chr10 7345097 7345308 -132971457 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345313 7345472 -132971293 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345480 7345500 -132971265 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345873 7346026 -132970739 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346044 7346211 -132970554 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347586 7347712 -132969053 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347841 7348154 -132968611 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349925 7349951 -132966814 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349951 7350261 -132966504 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350261 7350469 -132966296 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350848 7350949 -132965816 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350989 7351336 -132965429 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351411 7351613 -132965152 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351707 7352131 -132964634 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353667 7353786 -132962979 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353716 7353835 -132962930 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355133 7355202 -132961563 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355342 7355436 -132961329 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355447 7355531 -132961234 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355603 7356544 -132960221 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356562 7356746 -132960019 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356762 7356890 -132959875 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356894 7356940 -132959825 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356940 7357252 -132959513 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357252 7360014 -132956751 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7360014 7360208 -132956557 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360221 7360464 -132956301 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362177 7362323 -132954442 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362908 7362987 -132953778 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363076 7363448 -132953317 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363454 7363764 -132953001 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364236 7364609 -132952156 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364616 7364666 -132952099 - L1PA13 LINE L1 -344 5817 5773 468 105 0 0 chr10 7365147 7365223 -132951542 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366645 7366742 -132950023 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366740 7372148 -132944617 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372923 7373222 -132943543 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7374023 7374144 -132942621 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375715 7376021 -132940744 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376053 7376212 -132940553 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376712 7376761 -132940004 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377796 7377869 -132938896 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378259 7378560 -132938205 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378606 7378895 -132937870 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379253 7379295 -132937470 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379319 7379606 -132937159 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379658 7379834 -132936931 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380171 7380463 -132936302 - AluSg SINE Alu -8 302 1 597 332 53 4 chr10 7381370 7381596 -132935169 + L2 LINE L2 2812 3048 -265 239 217 0 22 chr10 7381992 7382038 -132934727 + MER106B DNA MER1_type 1 45 -1014 634 195 27 34 chr10 7382056 7382205 -132934560 + MER106B DNA MER1_type 908 1055 -4 2189 101 10 0 chr10 7382785 7383082 -132933683 - AluSp SINE Alu -13 300 1 197 139 23 0 chr10 7383526 7383569 -132933196 + (TG)n Simple_repeat Simple_repeat 1 44 0 558 261 141 0 chr10 7384523 7384707 -132932058 - MIR SINE MIR 0 262 53 1520 202 70 89 chr10 7384745 7385275 -132931490 - MLT2B1 LTR ERVL 0 520 1 1103 84 17 11 chr10 7385332 7385511 -132931254 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 180 152 0 0 chr10 7385511 7385544 -132931221 + CT-rich Low_complexity Low_complexity 2 34 0 1966 132 0 0 chr10 7385545 7385818 -132930947 - AluSx SINE Alu -39 273 1 849 138 8 8 chr10 7386661 7386791 -132929974 + FLAM_C SINE Alu 1 130 -3 216 0 0 0 chr10 7386794 7386818 -132929947 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1388 179 39 0 chr10 7386835 7387069 -132929696 + AluJb SINE Alu 1 243 -69 265 163 62 0 chr10 7387207 7387287 -132929478 + (TTATA)n Simple_repeat Simple_repeat 2 86 0 2173 53 0 8 chr10 7388205 7388467 -132928298 - L1PA5 LINE L1 -3 6151 5892 2236 85 7 4 chr10 7389350 7389680 -132927085 - AluSq SINE Alu 0 331 1 969 233 33 14 chr10 7390308 7390523 -132926242 + MER20 DNA MER1_type 1 219 0 293 235 188 0 chr10 7390924 7391009 -132925756 - MLT1J2 LTR MaLR -161 289 189 1047 217 7 8 chr10 7391201 7391446 -132925319 - MLT2B1 LTR ERVL -173 241 3 284 256 44 11 chr10 7391446 7391536 -132925229 - L1M LINE L1 -752 5410 5318 1246 224 16 32 chr10 7392058 7392371 -132924394 - AluJo SINE Alu -4 308 1 1108 288 69 37 chr10 7392517 7393363 -132923402 - L1M4 LINE L1 -901 5245 4373 229 317 0 20 chr10 7393642 7393743 -132923022 + T-rich Low_complexity Low_complexity 2 100 0 1600 184 54 32 chr10 7393887 7394203 -132922562 - MER58B DNA MER1_type 0 341 19 2467 121 8 8 chr10 7395974 7396338 -132920427 - THE1B LTR MaLR 0 364 1 246 136 0 0 chr10 7396908 7396952 -132919813 + (TC)n Simple_repeat Simple_repeat 2 45 0 198 352 28 9 chr10 7399682 7399790 -132916975 - L2 LINE L2 0 3272 3163 5950 65 11 0 chr10 7400127 7401328 -132915437 - L1PA8A LINE L1 -2 6129 5021 305 155 0 17 chr10 7401328 7401375 -132915390 - L1P LINE L1 -3432 2714 2667 1017 121 0 7 chr10 7401375 7401515 -132915250 - AluSq/x SINE Alu -173 139 1 705 230 0 0 chr10 7401638 7401816 -132914949 + (CA)n Simple_repeat Simple_repeat 1 178 0 207 114 0 0 chr10 7402869 7402904 -132913861 + (TCC)n Simple_repeat Simple_repeat 1 35 0 387 312 34 29 chr10 7402943 7403148 -132913617 - MIR SINE MIR -14 248 43 1419 194 44 106 chr10 7403350 7403784 -132912981 - MLT2D LTR ERVL -7 407 1 407 217 0 0 chr10 7405891 7405974 -132910791 + L2 LINE L2 1935 2017 -1297 375 78 0 0 chr10 7406701 7406752 -132910013 + (GA)n Simple_repeat Simple_repeat 1 51 0 417 286 97 7 chr10 7406872 7407026 -132909739 + L2 LINE L2 2363 2530 -784 1478 113 0 0 chr10 7407045 7407239 -132909526 + AluSx SINE Alu 1 194 -118 939 88 64 0 chr10 7407239 7407364 -132909401 + AluSg/x SINE Alu 143 275 -35 1784 108 115 0 chr10 7407445 7407705 -132909060 - AluSx SINE Alu -18 294 5 237 326 74 0 chr10 7408283 7408378 -132908387 + HAL1 LINE L1 19 120 -2387 1795 149 30 33 chr10 7409589 7409890 -132906875 - AluJo SINE Alu -12 300 1 1534 115 165 27 chr10 7411434 7411695 -132905070 - AluSg SINE Alu -3 297 1 2677 33 7 0 chr10 7413065 7413366 -132903399 + AluY SINE Alu 1 303 -8 1637 177 55 6 chr10 7413652 7413979 -132902786 + MER2 DNA MER2_type 1 343 -1 185 0 40 0 chr10 7414442 7414467 -132902298 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 524 200 8 0 chr10 7416917 7417042 -132899723 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 195 283 151 13 chr10 7417237 7417389 -132899376 - MIR SINE MIR -3 259 87 1340 172 17 4 chr10 7418361 7418599 -132898166 + AluJb SINE Alu 64 304 -8 1798 178 0 16 chr10 7419181 7419485 -132897280 - AluJb SINE Alu -13 299 1 1532 196 91 6 chr10 7420161 7420502 -132896263 - MLT1A2 LTR MaLR -4 370 1 1528 104 75 90 chr10 7421331 7421610 -132895155 - AluSq SINE Alu 0 313 39 2125 130 3 0 chr10 7423618 7423910 -132892855 + AluSc SINE Alu 1 293 -16 274 284 0 14 chr10 7424909 7424983 -132891782 + CT-rich Low_complexity Low_complexity 2 74 0 943 199 0 0 chr10 7425574 7425735 -132891030 - AluJo SINE Alu -5 297 137 2338 114 56 8 chr10 7425738 7426096 -132890669 - THE1C LTR MaLR 0 375 1 794 161 8 0 chr10 7426109 7426239 -132890526 - AluJo SINE Alu -171 131 1 2702 48 0 0 chr10 7426345 7426661 -132890104 - L1PA5 LINE L1 -343 5811 5496 2274 73 23 7 chr10 7426664 7426966 -132889799 + L1PA5 LINE L1 5842 6148 -6 316 258 22 0 chr10 7427248 7427337 -132889428 - HAL1 LINE L1 -861 1646 1556 2198 101 0 10 chr10 7427352 7427640 -132889125 + AluSx SINE Alu 5 289 -23 424 188 51 68 chr10 7427716 7427833 -132888932 - HAL1 LINE L1 -1813 694 580 443 308 115 40 chr10 7427877 7428250 -132888515 - HAL1 LINE L1 -2099 408 8 2297 114 57 20 chr10 7428438 7428789 -132887976 + THE1B LTR MaLR 1 364 0 248 286 133 0 chr10 7428993 7429091 -132887674 + L2 LINE L2 3200 3310 -3 2103 117 7 26 chr10 7429132 7429441 -132887324 - AluSx SINE Alu -9 303 1 965 255 109 26 chr10 7430025 7430448 -132886317 - MLT1C LTR MaLR -4 463 6 21 0 0 0 chr10 7430595 7430616 -132886149 + AT_rich Low_complexity Low_complexity 1 21 0 447 19 0 0 chr10 7430684 7430736 -132886029 + (CA)n Simple_repeat Simple_repeat 2 53 0 2427 88 0 0 chr10 7431633 7431928 -132884837 + AluSx SINE Alu 1 295 -17 718 120 0 7 chr10 7432782 7433000 -132883765 + AluSx SINE Alu 37 304 -8 405 278 99 68 chr10 7433005 7433059 -132883706 + L2 LINE L2 2437 2488 -825 1899 203 104 38 chr10 7433059 7433586 -132883179 - MER68 LTR ERV1 0 562 1 405 278 99 68 chr10 7433586 7434054 -132882711 + L2 LINE L2 2488 3045 -268 2459 94 0 0 chr10 7434054 7434361 -132882404 + AluSx SINE Alu 1 307 -5 405 278 99 68 chr10 7434361 7434632 -132882133 + L2 LINE L2 3045 3306 -7 2020 125 3 0 chr10 7434943 7435230 -132881535 + AluSx SINE Alu 1 288 -24 494 90 0 13 chr10 7435230 7435308 -132881457 + (GGGA)n Simple_repeat Simple_repeat 1 77 0 198 103 0 0 chr10 7435487 7435516 -132881249 + (T)n Simple_repeat Simple_repeat 1 29 0 2115 105 3 7 chr10 7436902 7437215 -132879550 + AluSx SINE Alu 1 312 0 642 288 106 30 chr10 7439779 7440186 -132876579 + MLT1L LTR MaLR 146 583 -32 724 192 61 37 chr10 7440812 7441026 -132875739 + MER20 DNA MER1_type 1 219 0 1832 164 14 3 chr10 7442211 7442503 -132874262 + AluJb SINE Alu 1 295 -17 1665 123 4 0 chr10 7443300 7443319 -132873446 - AluSx SINE Alu -8 304 287 258 32 0 0 chr10 7443319 7443350 -132873415 + (TCCCC)n Simple_repeat Simple_repeat 5 35 0 1665 123 4 0 chr10 7443350 7443574 -132873191 - AluSx SINE Alu -25 287 60 370 280 32 24 chr10 7444201 7444326 -132872439 + MIR SINE MIR 5 130 -132 924 181 136 0 chr10 7444435 7444634 -132872131 - MER46A DNA MER2_type 0 236 11 2312 78 0 27 chr10 7445609 7445904 -132870861 - AluSc SINE Alu -22 287 1 2599 235 81 33 chr10 7446924 7447691 -132869074 - MER21B LTR ERV1 -51 812 9 2079 130 0 0 chr10 7448965 7449250 -132867515 - AluSg SINE Alu -25 285 1 747 150 41 0 chr10 7449282 7449429 -132867336 - L1MA4 LINE L1 -3 6297 6145 4164 142 66 1 chr10 7449629 7450328 -132866437 + L1PA16 LINE L1 5423 6166 0 944 141 0 0 chr10 7452430 7452565 -132864200 + AluJo SINE Alu 1 135 -177 2290 125 0 0 chr10 7453027 7453339 -132863426 + AluSx SINE Alu 1 312 0 2401 98 0 0 chr10 7453698 7454003 -132862762 - AluSg SINE Alu -5 305 1 21 57 0 0 chr10 7454436 7454471 -132862294 + AT_rich Low_complexity Low_complexity 1 35 0 323 297 27 9 chr10 7454759 7454870 -132861895 + MIR3 SINE MIR 14 126 -82 327 231 45 52 chr10 7455160 7455294 -132861471 - L2 LINE L2 -87 3226 3094 254 244 0 61 chr10 7457981 7458063 -132858702 - MIR SINE MIR -130 132 56 29 0 0 0 chr10 7458815 7458844 -132857921 + AT_rich Low_complexity Low_complexity 1 29 0 2465 108 8 22 chr10 7459143 7459512 -132857253 - THE1B LTR MaLR 0 364 1 1124 273 93 44 chr10 7459672 7460196 -132856569 + L1MC4a LINE L1 5393 5942 -1866 261 311 11 11 chr10 7460418 7460508 -132856257 - MIR3 SINE MIR -21 187 98 203 147 0 0 chr10 7460896 7460930 -132855835 + (TGG)n Simple_repeat Simple_repeat 2 35 0 463 266 211 0 chr10 7462109 7462398 -132854367 + L2 LINE L2 2456 2805 -509 2042 96 0 0 chr10 7462518 7462778 -132853987 + AluY SINE Alu 43 302 -9 307 250 26 0 chr10 7462821 7462897 -132853868 - L2 LINE L2 -2 3311 3234 1225 192 40 14 chr10 7466243 7466519 -132850246 - L1MB3 LINE L1 -2 6181 5899 2174 148 11 0 chr10 7467034 7467385 -132849380 - THE1A LTR MaLR 0 355 1 276 289 115 19 chr10 7467431 7467587 -132849178 + MIR SINE MIR 25 195 -67 1918 138 17 17 chr10 7468186 7468483 -132848282 - AluJb SINE Alu -15 297 1 3650 55 2 4 chr10 7470362 7470819 -132845946 - L1PA8 LINE L1 0 6172 5717 467 221 131 14 chr10 7472488 7472633 -132844132 + MIR SINE MIR 29 190 -72 195 69 0 0 chr10 7472788 7472817 -132843948 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 758 239 75 25 chr10 7473879 7474159 -132842606 - L1MC4a LINE L1 -1779 6029 5736 260 91 0 0 chr10 7474284 7474317 -132842448 - U2 snRNA snRNA -155 33 1 2129 92 0 4 chr10 7474911 7475182 -132841583 - AluSq SINE Alu -5 308 39 1480 226 10 3 chr10 7476065 7476545 -132840220 - AluJb SINE Alu 0 482 1 908 159 0 0 chr10 7476547 7476679 -132840086 - AluJo/FLAM SINE Alu -180 132 1 198 0 0 0 chr10 7477557 7477579 -132839186 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1376 180 22 73 chr10 7478232 7478549 -132838216 + AluJb SINE Alu 1 301 -11 2132 100 21 0 chr10 7478735 7479026 -132837739 - AluSq SINE Alu -16 297 1 2120 117 0 20 chr10 7479606 7479905 -132836860 + AluSx SINE Alu 1 293 -19 276 268 107 18 chr10 7481535 7481647 -132835118 + MIR SINE MIR 21 142 -66 952 194 22 0 chr10 7482244 7482424 -132834341 - MER5A DNA MER1_type -4 185 2 2086 155 0 0 chr10 7484343 7484647 -132832118 + AluSx SINE Alu 1 304 -8 279 167 0 0 chr10 7484648 7484696 -132832069 - AluSp/q SINE Alu -6 297 250 1295 96 0 0 chr10 7484698 7484855 -132831910 - AluSx SINE Alu -147 165 9 650 337 36 36 chr10 7484976 7485442 -132831323 + L1ME3A LINE L1 5415 5880 -290 395 342 99 14 chr10 7491811 7492156 -132824609 - L2 LINE L2 -8 3305 2932 200 286 51 10 chr10 7492140 7492238 -132824527 - L2 LINE L2 -579 2735 2634 * 449 259 42 36 chr10 7492303 7492457 -132824308 - L2 LINE L2 -1420 1894 1737 2253 122 39 28 chr10 7492457 7492817 -132823948 - THE1B LTR MaLR 0 364 1 449 259 42 36 chr10 7492817 7492828 -132823937 - L2 LINE L2 -1577 1737 1728 841 152 15 0 chr10 7497013 7497145 -132819620 + AluJo SINE Alu 2 135 -177 428 171 0 11 chr10 7497147 7497235 -132819530 + (TATG)n Simple_repeat Simple_repeat 2 88 0 2124 141 33 33 chr10 7499071 7499434 -132817331 - THE1B LTR MaLR -1 363 1 3556 26 2 0 chr10 7500746 7501161 -132815604 - L1PA4 LINE L1 -3 6152 5737 1929 125 30 0 chr10 7501285 7501580 -132815185 + AluSq SINE Alu 1 304 -9 274 212 30 0 chr10 7502130 7502196 -132814569 - L1MC4 LINE L1 -133 7909 7842 548 158 24 4 chr10 7502196 7502363 -132814402 - MER46A DNA MER2_type 0 236 1 1766 106 0 4 chr10 7502366 7502612 -132814153 - AluSc SINE Alu -12 297 53 294 167 19 0 chr10 7502613 7502667 -132814098 - MER68 LTR ERV1 -503 59 5 362 239 23 0 chr10 7502689 7502777 -132813988 - L1MC4 LINE L1 -1455 6587 6498 591 258 150 41 chr10 7502934 7503184 -132813581 - LTR16A LTR ERVL -57 393 95 1853 126 0 54 chr10 7503184 7503501 -132813264 + AluSx SINE Alu 1 300 -12 591 258 150 41 chr10 7503501 7503591 -132813174 - LTR16A LTR ERVL -355 95 16 252 59 0 0 chr10 7504199 7504233 -132812532 + (T)n Simple_repeat Simple_repeat 1 34 0 1387 213 41 46 chr10 7505515 7505736 -132811029 - MLT1B LTR MaLR 0 390 170 1339 202 26 10 chr10 7505736 7506038 -132810727 - AluJo SINE Alu -1 311 5 1387 213 41 46 chr10 7506038 7506205 -132810560 - MLT1B LTR MaLR -220 170 4 212 0 36 0 chr10 7508654 7508682 -132808083 + (CA)n Simple_repeat Simple_repeat 2 30 0 258 304 43 35 chr10 7509615 7509730 -132807035 - MIR3 SINE MIR -12 196 81 630 242 60 64 chr10 7510428 7510753 -132806012 - MLT1B LTR MaLR -6 384 40 333 294 49 11 chr10 7512761 7512945 -132803820 - L1MDa LINE L1 -5625 915 725 1829 250 54 32 chr10 7512958 7513607 -132803158 - L1MDa LINE L1 -5867 673 11 2047 133 0 9 chr10 7514359 7514674 -132802091 + AluSx SINE Alu 1 312 0 1377 71 0 0 chr10 7515544 7515714 -132801051 - AluSq SINE Alu -18 295 126 401 223 40 68 chr10 7517000 7517148 -132799617 + L2 LINE L2 3170 3313 0 278 375 19 0 chr10 7517321 7517425 -132799340 + MIR SINE MIR 39 144 -64 186 43 0 0 chr10 7517528 7517551 -132799214 + (CAGAA)n Simple_repeat Simple_repeat 5 27 0 347 73 18 0 chr10 7518815 7518870 -132797895 + (TG)n Simple_repeat Simple_repeat 2 57 0 1671 166 17 7 chr10 7519210 7519512 -132797253 - AluJo SINE Alu -7 305 1 243 0 0 0 chr10 7520466 7520493 -132796272 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 2104 114 0 3 chr10 7520498 7520797 -132795968 - AluSx SINE Alu -14 298 1 201 365 111 8 chr10 7521124 7521250 -132795515 + MIR3 SINE MIR 17 155 -53 328 185 62 0 chr10 7525418 7525483 -132791282 - AluJ/FRAM SINE Alu -2 300 232 886 164 26 0 chr10 7525568 7525720 -132791045 - FRAM SINE Alu -21 155 1 275 296 211 13 chr10 7526565 7526717 -132790048 + MIR SINE MIR 20 201 -61 336 272 39 0 chr10 7527578 7527681 -132789084 - L1M4 LINE L1 -1023 5123 5017 1274 159 42 85 chr10 7527742 7528025 -132788740 + AluJo SINE Alu 7 277 -35 271 271 123 47 chr10 7528219 7528455 -132788310 - L1M4 LINE L1 -1248 4898 4645 383 264 0 21 chr10 7529100 7529210 -132787555 - L1ME2 LINE L1 -298 5866 5760 375 23 0 0 chr10 7529210 7529254 -132787511 + (CA)n Simple_repeat Simple_repeat 2 45 0 267 329 0 0 chr10 7529510 7529586 -132787179 - MIR SINE MIR -108 154 79 192 244 24 0 chr10 7530452 7530493 -132786272 - MIR SINE MIR -3 259 218 547 219 61 114 chr10 7530547 7530793 -132785972 + L2 LINE L2 3081 3313 0 * 559 256 149 14 chr10 7530767 7530982 -132785783 - MIR SINE MIR -6 256 13 184 287 41 98 chr10 7531316 7531438 -132785327 - MIR SINE MIR -6 256 142 295 333 72 0 chr10 7531511 7531622 -132785143 + L2 LINE L2 3139 3257 -15 305 303 0 35 chr10 7531784 7531926 -132784839 + C-rich Low_complexity Low_complexity 6 142 0 445 338 0 0 chr10 7532166 7532314 -132784451 + C-rich Low_complexity Low_complexity 1 148 0 774 157 0 0 chr10 7532427 7532787 -132783978 + GA-rich Low_complexity Low_complexity 1 360 0 195 330 0 34 chr10 7533283 7533371 -132783394 - MIR SINE MIR -74 188 104 2422 60 0 0 chr10 7533868 7534166 -132782599 - AluY SINE Alu -12 299 2 229 216 0 54 chr10 7534566 7534640 -132782125 + L1ME LINE L1 4577 4646 -1500 2288 135 16 16 chr10 7534708 7535072 -132781693 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7535273 7535304 -132781461 + (CA)n Simple_repeat Simple_repeat 2 32 0 311 301 38 38 chr10 7535581 7535714 -132781051 + L1ME LINE L1 5653 5785 -377 2058 116 13 10 chr10 7535838 7536149 -132780616 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7536549 7536578 -132780187 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1132 174 64 138 chr10 7537297 7537628 -132779137 - MLT1B LTR MaLR 0 390 95 2369 73 0 0 chr10 7537628 7537930 -132778835 - AluSx SINE Alu -6 306 5 1132 174 64 138 chr10 7537930 7538018 -132778747 - MLT1B LTR MaLR -295 95 2 421 267 61 28 chr10 7538198 7538378 -132778387 - MER20B DNA MER1_type -83 700 515 930 127 40 0 chr10 7538424 7538597 -132778168 + L1MB8 LINE L1 5998 6177 -1 984 289 102 11 chr10 7538676 7539116 -132777649 - MER20B DNA MER1_type -268 515 36 2992 198 84 30 chr10 7539878 7540086 -132776679 - L1ME1 LINE L1 -1 6165 5970 2039 114 0 0 chr10 7540086 7540366 -132776399 + AluSx SINE Alu 22 301 -11 2992 198 84 30 chr10 7540366 7541336 -132775429 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7541897 7541924 -132774841 + (ATG)n Simple_repeat Simple_repeat 1 27 0 562 269 44 0 chr10 7542189 7542349 -132774416 - MLT1G LTR MaLR 0 590 424 * 998 275 50 17 chr10 7542347 7542645 -132774120 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7543307 7543390 -132773375 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7544320 7544379 -132772386 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7544404 7544708 -132772057 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7545531 7545832 -132770933 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7545990 7546038 -132770727 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7546058 7546252 -132770513 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7546252 7546347 -132770418 - THE1C LTR MaLR -1 374 279 236 342 7 20 chr10 7546348 7546500 -132770265 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7547751 7547987 -132768778 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7548248 7548287 -132768478 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7549174 7549317 -132767448 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7549317 7549352 -132767413 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7550003 7550401 -132766364 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7550989 7551404 -132765361 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7551623 7551941 -132764824 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7552793 7553069 -132763696 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7553220 7553342 -132763423 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7554343 7554560 -132762205 + L1MC5 LINE L1 7706 7925 -36 2453 54 40 3 chr10 7555063 7555361 -132761404 - AluY SINE Alu -2 309 1 5196 120 8 10 chr10 7555610 7556392 -132760373 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7556907 7557264 -132759501 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7557349 7557645 -132759120 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7558020 7558321 -132758444 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7558911 7559007 -132757758 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7559352 7559693 -132757072 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7559711 7559903 -132756862 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7562102 7562424 -132754341 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7564058 7564230 -132752535 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7564535 7564562 -132752203 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7565002 7565199 -132751566 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7565395 7565709 -132751056 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7566225 7566469 -132750296 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7566469 7566785 -132749980 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7566785 7567053 -132749712 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7567130 7567311 -132749454 - Charlie2 DNA MER1_type -2571 211 22 1387 203 75 11 chr10 7567347 7567722 -132749043 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7567723 7568210 -132748555 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7568210 7568501 -132748264 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7568501 7568934 -132747831 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7569058 7569383 -132747382 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7569890 7570332 -132746433 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7572597 7572670 -132744095 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7572797 7573098 -132743667 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7573558 7573615 -132743150 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7573900 7573924 -132742841 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7575610 7575661 -132741104 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7575661 7575966 -132740799 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7575966 7576257 -132740508 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7576257 7576329 -132740436 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7576329 7576416 -132740349 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7578165 7578596 -132738169 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7579377 7579573 -132737192 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7579681 7579724 -132737041 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7579893 7579999 -132736766 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7580636 7580924 -132735841 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7581660 7581787 -132734978 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7582480 7582778 -132733987 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7583727 7584038 -132732727 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7584532 7584829 -132731936 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7585616 7586043 -132730722 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7586593 7586899 -132729866 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7588363 7588413 -132728352 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7589050 7589352 -132727413 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7589501 7589807 -132726958 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7589915 7590471 -132726294 - MER1A DNA MER1_type 0 527 1 1903 166 103 35 chr10 7590655 7591052 -132725713 - MLT2B1 LTR ERVL -95 425 2 2150 121 7 0 chr10 7591620 7591909 -132724856 - AluSx SINE Alu -19 293 3 304 217 0 0 chr10 7592957 7593017 -132723748 + MIR3 SINE MIR 133 192 -16 290 323 155 0 chr10 7594024 7594179 -132722586 + MIR SINE MIR 2 180 -82 180 176 0 0 chr10 7594208 7594242 -132722523 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 257 291 27 9 chr10 7594755 7594865 -132721900 + HAL1 LINE L1 1744 1855 -652 1046 215 89 15 chr10 7594897 7595057 -132721708 + HAL1 LINE L1 2043 2190 -317 426 20 0 0 chr10 7595057 7595108 -132721657 + (TG)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7595108 7595272 -132721493 + HAL1 LINE L1 2190 2391 -116 24 0 0 0 chr10 7595304 7595328 -132721437 + AT_rich Low_complexity Low_complexity 1 24 0 466 261 76 53 chr10 7595558 7595657 -132721108 - L1ME1 LINE L1 0 6162 6067 679 159 0 0 chr10 7595657 7595764 -132721001 + U6 snRNA snRNA 1 107 0 1579 139 58 0 chr10 7595764 7596023 -132720742 + L1PB4 LINE L1 5880 6153 -3 466 261 76 53 chr10 7596023 7596315 -132720450 - L1ME1 LINE L1 -94 6068 5761 25 0 0 0 chr10 7598065 7598090 -132718675 + AT_rich Low_complexity Low_complexity 1 25 0 205 75 75 0 chr10 7598176 7598216 -132718549 + T-rich Low_complexity Low_complexity 4 46 0 792 181 181 16 chr10 7599481 7599669 -132717096 - MER20 DNA MER1_type 0 219 1 817 144 0 0 chr10 7599934 7600052 -132716713 - FLAM_C SINE Alu -22 121 4 2293 104 3 3 chr10 7600070 7600369 -132716396 - AluSq SINE Alu -14 299 1 222 241 0 19 chr10 7600591 7600645 -132716120 + CT-rich Low_complexity Low_complexity 4 56 0 264 30 0 0 chr10 7601021 7601054 -132715711 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 475 189 57 0 chr10 7602012 7602118 -132714647 + MIR SINE MIR 53 164 -98 2068 131 0 31 chr10 7602643 7602964 -132713801 - AluSx SINE Alu -1 311 1 686 214 0 0 chr10 7603475 7603592 -132713173 + FLAM_A SINE Alu 13 129 -13 213 119 0 0 chr10 7603615 7603657 -132713108 + (GA)n Simple_repeat Simple_repeat 2 43 0 320 283 82 61 chr10 7603657 7604194 -132712571 + L1ME LINE L1 5270 5829 -292 2176 152 17 6 chr10 7604581 7604942 -132711823 - MLT1A1 LTR MaLR 0 365 1 2266 110 0 3 chr10 7605322 7605622 -132711143 - AluSx SINE Alu -13 299 1 39 0 0 0 chr10 7605751 7605790 -132710975 + AT_rich Low_complexity Low_complexity 1 39 0 407 130 413 0 chr10 7605790 7605882 -132710883 - AluJo SINE Alu -176 136 7 22 0 0 0 chr10 7605882 7605904 -132710861 + AT_rich Low_complexity Low_complexity 1 22 0 1823 112 0 0 chr10 7607518 7607767 -132708998 + AluSx SINE Alu 64 312 0 2183 92 0 62 chr10 7608189 7608514 -132708251 + AluSq SINE Alu 1 305 -8 2057 133 18 33 chr10 7608593 7609090 -132707675 - L1MB7 LINE L1 -175 6009 2806 2388 178 71 11 chr10 7609303 7609769 -132706996 + MLT1D LTR MaLR 12 505 0 547 306 104 0 chr10 7609833 7610055 -132706710 + MIR SINE MIR 12 256 -6 3122 230 29 52 chr10 7610739 7612155 -132704610 - L1M4 LINE L1 -1053 5093 3813 2095 328 38 23 chr10 7612238 7613366 -132703399 - HERV16 LTR ERVL -1916 3080 2262 2069 126 11 3 chr10 7613615 7613901 -132702864 - AluSx SINE Alu -20 292 5 420 290 150 34 chr10 7614399 7614751 -132702014 + L1ME LINE L1 5378 5699 -463 244 308 0 0 chr10 7614784 7614862 -132701903 + L1ME LINE L1 5814 5891 -279 772 204 38 6 chr10 7614862 7615051 -132701714 - MLT1D LTR MaLR -4 545 311 512 197 33 40 chr10 7615120 7615272 -132701493 - MLT1D LTR MaLR -351 154 4 238 309 12 0 chr10 7615387 7615468 -132701297 + MLT1J LTR MaLR 120 201 -310 186 43 0 0 chr10 7615552 7615575 -132701190 + (A)n Simple_repeat Simple_repeat 1 23 0 3648 74 2 4 chr10 7616791 7617262 -132699503 - L1PA10 LINE L1 -8 6160 5691 244 354 0 0 chr10 7617326 7617439 -132699326 + CT-rich Low_complexity Low_complexity 5 117 0 183 42 0 0 chr10 7617807 7617831 -132698934 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1678 146 13 73 chr10 7618052 7618367 -132698398 + AluJb SINE Alu 1 296 -16 1220 124 295 8 chr10 7618407 7618641 -132698124 + AluSq SINE Alu 2 302 -1 440 134 24 0 chr10 7618664 7618746 -132698019 + GA-rich Low_complexity Low_complexity 4 87 0 238 257 81 14 chr10 7618794 7618868 -132697897 - MIR3 SINE MIR -41 167 89 1432 107 65 0 chr10 7619048 7619264 -132697501 - MER30 DNA MER1_type 0 230 1 234 366 37 8 chr10 7619340 7619474 -132697291 + L2 LINE L2 3126 3263 -9 2349 82 3 0 chr10 7619809 7620102 -132696663 + AluSq SINE Alu 1 294 -19 2255 108 0 3 chr10 7620220 7620517 -132696248 - AluSc SINE Alu -13 296 1 774 84 0 0 chr10 7620906 7621013 -132695752 + (TCCC)n Simple_repeat Simple_repeat 4 110 0 1560 183 39 7 chr10 7621013 7621290 -132695475 - AluJo SINE Alu -23 289 1 256 24 49 0 chr10 7621862 7621903 -132694862 + (TA)n Simple_repeat Simple_repeat 1 43 0 1913 42 8 4 chr10 7621903 7622132 -132694633 - L1PA5 LINE L1 -5 6149 5917 433 82 16 0 chr10 7622132 7622193 -132694572 + L1PA5 LINE L1 5855 5916 -238 301 309 55 0 chr10 7622949 7623059 -132693706 - L2 LINE L2 0 3313 3198 797 284 120 12 chr10 7623714 7624055 -132692710 - LTR16C LTR ERVL -7 484 107 281 188 0 88 chr10 7624309 7624333 -132692432 - MLT1J1 LTR MaLR -22 424 399 2079 129 3 0 chr10 7624333 7624627 -132692138 + AluSx SINE Alu 1 295 -17 281 188 0 88 chr10 7624627 7624682 -132692083 - MLT1J1 LTR MaLR -47 399 352 2304 97 7 0 chr10 7625086 7625394 -132691371 + AluY SINE Alu 1 310 -1 24 32 0 0 chr10 7625621 7625652 -132691113 + AT_rich Low_complexity Low_complexity 1 31 0 388 287 70 0 chr10 7626737 7626866 -132689899 - MIR SINE MIR -31 231 94 649 135 8 71 chr10 7627189 7627315 -132689450 + FLAM_C SINE Alu 1 118 -15 396 278 0 0 chr10 7627426 7627534 -132689231 - MIR SINE MIR -66 196 89 1012 249 82 33 chr10 7627597 7627710 -132689055 + LTR40b LTR ERVL 73 179 -283 2027 188 5 5 chr10 7627710 7628094 -132688671 - L1PB4 LINE L1 -4 6152 5769 3895 122 27 42 chr10 7628094 7628759 -132688006 - L1PA13 LINE L1 0 6163 5509 1012 249 82 33 chr10 7628759 7629072 -132687693 + LTR40b LTR ERVL 178 462 0 276 338 0 0 chr10 7629072 7629152 -132687613 - MIR SINE MIR -171 91 12 189 382 24 18 chr10 7629164 7629329 -132687436 - L2 LINE L2 -188 3084 2919 1854 141 48 7 chr10 7629511 7629802 -132686963 + AluSx SINE Alu 1 303 -9 2185 86 7 30 chr10 7630343 7630645 -132686120 - AluSp SINE Alu 0 313 19 577 259 57 57 chr10 7630990 7631183 -132685582 + MLT1L LTR MaLR 24 216 -399 2152 140 7 0 chr10 7631456 7631763 -132685002 + AluSx SINE Alu 1 309 -3 688 136 0 19 chr10 7632714 7632817 -132683948 - Tigger7 DNA MER2_type 0 2487 2387 1435 224 11 0 chr10 7632818 7633082 -132683683 - Tigger7 DNA MER2_type -466 267 1 618 253 31 41 chr10 7633084 7633659 -132683106 - L1MCc LINE L1 -4795 2146 1263 890 139 0 8 chr10 7633883 7634012 -132682753 + AluJb SINE Alu 164 291 -21 285 266 87 49 chr10 7634427 7634611 -132682154 - L1MCc LINE L1 -6219 204 14 215 79 26 0 chr10 7634786 7634824 -132681941 + (TA)n Simple_repeat Simple_repeat 2 40 0 1801 143 68 0 chr10 7634833 7635126 -132681639 + AluSx SINE Alu 1 311 0 797 298 82 70 chr10 7635249 7635833 -132680932 + L1MC4a LINE L1 5311 5901 -1907 1748 167 7 24 chr10 7635994 7636287 -132680478 + AluJb SINE Alu 4 291 -21 269 201 0 170 chr10 7638215 7638396 -132678369 + Charlie7 DNA MER1_type 2451 2599 -13 1557 165 0 92 chr10 7638396 7638544 -132678221 + AluJo SINE Alu 6 109 -203 2203 117 7 0 chr10 7638544 7638844 -132677921 + AluSp SINE Alu 1 302 -11 1557 165 0 92 chr10 7638844 7639022 -132677743 + AluJo SINE Alu 109 302 -10 269 201 0 170 chr10 7639022 7639034 -132677731 + Charlie7 DNA MER1_type 2599 2611 -1 370 211 117 16 chr10 7639529 7639657 -132677108 - Charlie1 DNA MER1_type 0 2761 2621 2325 100 0 0 chr10 7641434 7641744 -132675021 - AluSx SINE Alu 0 312 3 356 297 97 26 chr10 7641847 7642002 -132674763 + MIR SINE MIR 20 185 -77 1615 142 64 28 chr10 7642119 7642401 -132674364 - AluJo SINE Alu -20 292 1 317 244 8 3 chr10 7642855 7642936 -132673829 - AluJ/FLAM SINE Alu -238 64 1 1751 158 44 10 chr10 7642966 7643264 -132673501 + AluJb SINE Alu 1 308 -4 270 0 0 0 chr10 7643530 7643560 -132673205 + (CA)n Simple_repeat Simple_repeat 2 31 0 1037 139 0 6 chr10 7644434 7644592 -132672173 + AluSg/x SINE Alu 130 286 -23 21 0 0 0 chr10 7644592 7644613 -132672152 + AT_rich Low_complexity Low_complexity 1 21 0 549 345 24 5 chr10 7644840 7645049 -132671716 + MIR SINE MIR 49 261 -1 274 238 83 0 chr10 7645087 7645171 -132671594 - MIR SINE MIR -50 212 122 2151 111 0 0 chr10 7646170 7646467 -132670298 - AluSg SINE Alu -13 297 1 255 61 0 0 chr10 7646769 7646802 -132669963 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 1940 160 0 0 chr10 7647176 7647482 -132669283 + AluSx SINE Alu 1 306 -6 410 291 45 8 chr10 7647961 7648095 -132668670 + MIR SINE MIR 68 206 -56 2033 95 65 3 chr10 7648233 7648527 -132668238 + AluSx SINE Alu 1 312 0 197 264 226 9 chr10 7649909 7650015 -132666750 + MIR SINE MIR 84 212 -50 1762 149 7 19 chr10 7650361 7650670 -132666095 + AluJb SINE Alu 1 305 -7 2542 39 0 3 chr10 7651702 7652014 -132664751 - AluY SINE Alu 0 311 1 194 328 8 74 chr10 7652643 7652684 -132664081 + MIR3 SINE MIR 47 89 -119 2138 106 0 0 chr10 7652684 7652985 -132663780 + AluSx SINE Alu 5 305 -7 194 328 8 74 chr10 7652985 7653065 -132663700 + MIR3 SINE MIR 89 160 -48 574 244 144 12 chr10 7653065 7653225 -132663540 - MER5A DNA MER1_type 0 189 9 641 318 55 25 chr10 7653865 7653936 -132662829 + MIR SINE MIR 34 101 -161 415 95 24 83 chr10 7653936 7654020 -132662745 - MADE1 DNA Mariner -1 79 1 641 318 55 25 chr10 7654020 7654149 -132662616 + MIR SINE MIR 101 240 -22 2145 128 0 0 chr10 7654395 7654707 -132662058 + AluSx SINE Alu 1 312 0 1976 92 20 33 chr10 7654733 7655039 -132661726 + AluSx SINE Alu 2 303 -9 673 171 0 0 chr10 7655054 7655159 -132661606 + FLAM_A SINE Alu 23 127 -15 22 35 0 0 chr10 7655190 7655219 -132661546 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 7655585 7655610 -132661155 + AT_rich Low_complexity Low_complexity 1 25 0 963 300 101 31 chr10 7657633 7658380 -132658385 - L2 LINE L2 -2 3311 2513 206 157 0 39 chr10 7659478 7659529 -132657236 + CT-rich Low_complexity Low_complexity 3 51 0 311 270 114 28 chr10 7659987 7660055 -132656710 - MIR3 SINE MIR -40 222 161 2120 123 0 0 chr10 7660055 7660356 -132656409 - AluSg SINE Alu -9 301 1 311 270 114 28 chr10 7660356 7660498 -132656267 - MIR3 SINE MIR -101 161 5 875 165 6 19 chr10 7660537 7660695 -132656070 - FRAM SINE Alu -21 155 1 265 279 0 0 chr10 7661308 7661369 -132655396 + GA-rich Low_complexity Low_complexity 4 64 0 243 255 4 31 chr10 7661374 7661447 -132655318 - MIR3 SINE MIR -132 76 15 3473 84 24 0 chr10 7661647 7662101 -132654664 - Charlie3 DNA MER1_type -4 2706 2242 2950 107 34 2 chr10 7662086 7662498 -132654267 - Charlie3 DNA MER1_type -2199 511 87 * 509 284 47 30 chr10 7662515 7662684 -132654081 + MIR SINE MIR 63 234 -28 890 292 4 25 chr10 7662969 7663212 -132653553 + MIR SINE MIR 24 261 -1 450 280 106 24 chr10 7663673 7663802 -132652963 + L3 LINE CR1 1343 1497 -80 2119 113 30 88 chr10 7663802 7664200 -132652565 + THE1C LTR MaLR 1 375 0 450 280 106 24 chr10 7664200 7664277 -132652488 + L3 LINE CR1 1497 1566 -11 694 224 82 56 chr10 7664492 7664815 -132651950 + L2 LINE L2 2929 3307 -6 23 0 0 0 chr10 7665274 7665297 -132651468 + AT_rich Low_complexity Low_complexity 1 23 0 1778 157 7 0 chr10 7665805 7666092 -132650673 - AluJo SINE Alu -21 291 3 2124 111 0 29 chr10 7666752 7667067 -132649698 - AluSx SINE Alu -6 306 1 528 264 49 0 chr10 7667616 7667760 -132649005 - MIR3 SINE MIR -30 178 28 204 125 0 0 chr10 7671489 7671521 -132645244 + (CA)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 7671528 7671556 -132645209 + (A)n Simple_repeat Simple_repeat 1 28 0 235 167 14 28 chr10 7671623 7671695 -132645070 + (CGAG)n Simple_repeat Simple_repeat 2 72 0 200 206 0 0 chr10 7671864 7671898 -132644867 + A-rich Low_complexity Low_complexity 5 38 0 202 200 0 0 chr10 7672545 7672580 -132644185 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 283 76 62 chr10 7676769 7676914 -132639851 + MIR3 SINE MIR 13 159 -49 21 0 0 0 chr10 7678483 7678504 -132638261 + AT_rich Low_complexity Low_complexity 1 21 0 874 189 17 0 chr10 7678518 7678698 -132638067 - L1MA4 LINE L1 -7 6293 6111 371 273 163 17 chr10 7678707 7678879 -132637886 - MIR SINE MIR -18 244 48 1827 142 3 0 chr10 7678949 7679260 -132637505 - AluSx SINE Alu 0 312 1 2266 102 0 0 chr10 7681466 7681770 -132634995 - AluSx SINE Alu -8 304 1 2345 74 3 13 chr10 7683089 7683400 -132633365 + AluSx SINE Alu 1 308 -4 3059 40 0 21 chr10 7685554 7685932 -132630833 - L1PA5 LINE L1 -1 6153 5784 435 283 72 32 chr10 7686218 7686357 -132630408 + HAL1 LINE L1 651 806 -1701 1871 109 6 45 chr10 7686357 7686668 -132630097 - AluSx SINE Alu -13 299 1 435 283 72 32 chr10 7686668 7686779 -132629986 + HAL1 LINE L1 806 911 -1596 836 216 180 41 chr10 7686795 7687212 -132629553 + HAL1 LINE L1 942 1416 -1091 920 280 140 36 chr10 7687229 7687325 -132629440 + HAL1 LINE L1 1486 1571 -936 1378 147 151 8 chr10 7687325 7687584 -132629181 - AluSg1 SINE Alu -13 296 1 920 280 140 36 chr10 7687584 7688008 -132628757 + HAL1 LINE L1 1571 2060 -447 261 287 61 93 chr10 7688126 7688373 -132628392 + HAL1 LINE L1 2267 2505 -2 1329 119 106 0 chr10 7688392 7688619 -132628146 + AluJb SINE Alu 51 301 -11 278 255 39 10 chr10 7688643 7688745 -132628020 - MLT1J LTR MaLR -7 504 400 355 275 218 26 chr10 7688843 7689036 -132627729 - MLT1J LTR MaLR -281 230 1 2037 112 7 3 chr10 7689290 7689584 -132627181 + AluSx SINE Alu 1 295 -17 470 91 13 0 chr10 7689585 7689662 -132627103 + (TA)n Simple_repeat Simple_repeat 1 78 0 314 279 211 32 chr10 7689765 7690073 -132626692 + L1ME4a LINE L1 5007 5369 -777 2173 95 3 0 chr10 7690091 7690386 -132626379 - AluSx SINE Alu -14 298 3 521 286 48 31 chr10 7690501 7690791 -132625974 + L1ME4a LINE L1 5590 5884 -237 2292 88 0 0 chr10 7691138 7691435 -132625330 - AluSg SINE Alu -13 297 1 207 69 0 0 chr10 7691494 7691523 -132625242 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1986 119 0 0 chr10 7691525 7691803 -132624962 - AluSx SINE Alu -34 278 1 589 210 80 7 chr10 7692402 7692540 -132624225 - MER3 DNA MER1_type -24 185 38 282 308 60 17 chr10 7692821 7692938 -132623827 - MIR3 SINE MIR -6 202 81 678 131 10 0 chr10 7693949 7694048 -132622717 + AluSq/x SINE Alu 5 104 -208 961 150 6 12 chr10 7694221 7694388 -132622377 + AluSq SINE Alu 119 284 -29 405 0 0 0 chr10 7694388 7694433 -132622332 + (CAT)n Simple_repeat Simple_repeat 2 46 0 595 262 35 79 chr10 7694443 7694672 -132622093 + L2 LINE L2 3092 3310 -3 1942 107 7 58 chr10 7694797 7695107 -132621658 - AluSx SINE Alu -14 298 5 631 280 75 0 chr10 7695772 7695958 -132620807 + MIR SINE MIR 15 214 -48 1598 146 4 0 chr10 7696161 7696407 -132620358 - AluSx SINE Alu -39 273 27 2312 60 13 3 chr10 7696743 7697042 -132619723 - AluY SINE Alu -9 302 1 2354 99 0 0 chr10 7698518 7698831 -132617934 - AluSp SINE Alu 0 313 1 720 166 0 65 chr10 7699406 7699545 -132617220 - FLAM_A SINE Alu -3 130 1 2042 130 0 0 chr10 7700340 7700632 -132616133 - AluSx SINE Alu -20 292 1 237 250 0 0 chr10 7701159 7701207 -132615558 - MLT1I LTR MaLR -16 393 346 240 261 80 57 chr10 7701325 7701413 -132615352 - MLT1J LTR MaLR -312 199 110 563 51 26 0 chr10 7701641 7701719 -132615046 + (TATG)n Simple_repeat Simple_repeat 4 83 0 1574 198 7 0 chr10 7701719 7702002 -132614763 - AluJb SINE Alu -27 285 1 453 260 81 98 chr10 7703629 7703864 -132612901 - MIR SINE MIR -19 243 13 344 220 43 0 chr10 7703924 7704065 -132612700 + (CA)n Simple_repeat Simple_repeat 2 148 0 1959 256 59 24 chr10 7754743 7755318 -132561447 - MLT1G1 LTR MaLR 0 595 1 2216 98 0 3 chr10 7756618 7756903 -132559862 + AluSx SINE Alu 21 304 -8 2374 124 8 8 chr10 7760140 7760495 -132556270 - THE1A LTR MaLR 0 355 1 553 219 231 0 chr10 7760798 7760967 -132555798 + MIR SINE MIR 5 212 -50 410 103 19 159 chr10 7761176 7761250 -132555515 + MLT1C LTR MaLR 3 59 -408 2130 143 0 6 chr10 7761250 7761564 -132555201 - AluSx SINE Alu 0 312 1 410 103 19 159 chr10 7761564 7761596 -132555169 + MLT1C LTR MaLR 59 94 -373 1274 129 0 6 chr10 7761596 7761774 -132554991 + AluSg/x SINE Alu 118 294 -16 1335 195 96 9 chr10 7761774 7762108 -132554657 + MLT1C LTR MaLR 102 464 -3 351 323 63 24 chr10 7763344 7763763 -132553002 + MER113 DNA MER1_type? 2 471 -50 1436 107 4 36 chr10 7765598 7765828 -132550937 - L1P LINE L1 -1275 4871 4648 1257 65 24 0 chr10 7765828 7765994 -132550771 + L1PA8 LINE L1 5997 6168 -4 1436 107 4 36 chr10 7765994 7766016 -132550749 - L1P LINE L1 -1498 4648 4627 685 153 0 0 chr10 7766262 7766360 -132550405 - AluS SINE Alu -214 99 2 2185 134 0 0 chr10 7766510 7766815 -132549950 - AluSx SINE Alu -6 306 2 2123 98 33 0 chr10 7767434 7767746 -132549019 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7768642 7768701 -132548064 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7768702 7768728 -132548037 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 883 181 7 13 chr10 7768741 7768896 -132547869 + FRAM SINE Alu 6 159 -17 2373 113 0 0 chr10 7769017 7769327 -132547438 - AluSx SINE Alu -2 310 1 1942 193 33 0 chr10 7769400 7769737 -132547028 - MER7A DNA MER2_type 0 346 1 2538 52 0 3 chr10 7769877 7770182 -132546583 + AluY SINE Alu 1 304 -7 2169 110 3 10 chr10 7770191 7770499 -132546266 + AluSc SINE Alu 1 306 -3 4196 135 34 1 chr10 7771750 7772404 -132544361 - L1PA15 LINE L1 -2 6163 5489 242 139 0 0 chr10 7772627 7772663 -132544102 - MER58 DNA MER1_type -2 2418 2383 2108 116 20 0 chr10 7773387 7773681 -132543084 + AluSx SINE Alu 7 306 -6 631 321 102 42 chr10 7773906 7774572 -132542193 + L1MEd LINE L1 26 731 -5388 1764 52 5 5 chr10 7774620 7774832 -132541933 + AluY SINE Alu 1 212 -99 2353 122 0 3 chr10 7775332 7775643 -132541122 - AluSx SINE Alu -2 310 1 930 213 22 0 chr10 7775736 7775919 -132540846 + MER7A DNA MER2_type 1 185 -161 246 302 32 0 chr10 7776308 7776371 -132540394 + MIR SINE MIR 70 134 -74 193 214 36 18 chr10 7776383 7776439 -132540326 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7777829 7777933 -132538832 + G-rich Low_complexity Low_complexity 5 107 0 2203 115 0 0 chr10 7778802 7779097 -132537668 - AluSc SINE Alu -14 295 1 454 271 56 124 chr10 7779409 7779748 -132537017 + L2 LINE L2 2858 3162 -110 2169 124 0 0 chr10 7779748 7780069 -132536696 - AluSc SINE Alu 0 309 3 454 271 56 124 chr10 7780069 7780172 -132536593 + L2 LINE L2 3162 3270 -2 226 124 56 34 chr10 7780317 7780406 -132536359 + (CAGAGA)n Simple_repeat Simple_repeat 4 94 0 387 282 132 80 chr10 7781434 7781995 -132534770 + L1M2 LINE L1 535 1124 -5725 234 294 11 76 chr10 7782583 7782675 -132534090 + L3b LINE CR1 1398 1483 -100 1018 133 0 19 chr10 7783205 7783363 -132533402 + FRAM SINE Alu 22 176 0 2138 97 0 7 chr10 7783838 7784117 -132532648 + AluSc SINE Alu 1 277 -32 243 61 0 0 chr10 7784117 7784150 -132532615 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2038 121 10 20 chr10 7784871 7785176 -132531589 + AluSx SINE Alu 1 302 -10 23 54 0 0 chr10 7786314 7786351 -132530414 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr10 7786655 7786681 -132530084 + AT_rich Low_complexity Low_complexity 1 26 0 1359 174 5 0 chr10 7789515 7789739 -132527026 - AluJo SINE Alu -3 309 85 1892 160 0 17 chr10 7789955 7790248 -132526517 - AluJb SINE Alu -19 293 6 24 32 0 0 chr10 7790988 7791019 -132525746 + AT_rich Low_complexity Low_complexity 1 31 0 1759 190 5 42 chr10 7791183 7791402 -132525363 - MLT1A1 LTR MaLR 0 365 139 195 69 0 0 chr10 7791402 7791431 -132525334 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2089 112 0 4 chr10 7791431 7791708 -132525057 - AluSc SINE Alu -33 276 1 1759 190 5 42 chr10 7791708 7791866 -132524899 - MLT1A1 LTR MaLR -224 141 1 255 212 59 59 chr10 7792406 7792491 -132524274 + MIR SINE MIR 52 136 -72 21 0 0 0 chr10 7792664 7792685 -132524080 + AT_rich Low_complexity Low_complexity 1 21 0 331 247 0 72 chr10 7795970 7796067 -132520698 + L1MC4 LINE L1 6614 6703 -1339 182 125 0 50 chr10 7796077 7796117 -132520648 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 329 274 48 0 chr10 7796122 7796206 -132520559 - L1MC4 LINE L1 -1340 6702 6615 521 189 11 28 chr10 7796240 7796420 -132520345 + (CATA)n Simple_repeat Simple_repeat 2 178 0 318 297 11 22 chr10 7796426 7796517 -132520248 + L1MC4 LINE L1 6614 6703 -1339 224 163 0 23 chr10 7796517 7796560 -132520205 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 313 264 23 11 chr10 7796565 7796652 -132520113 + L1MC4 LINE L1 6615 6702 -1340 326 217 33 65 chr10 7796666 7796758 -132520007 - L1MC4 LINE L1 -1340 6702 6614 318 192 10 144 chr10 7796671 7796775 -132519990 + L1MC4 LINE L1 6614 6703 -1339 * 210 136 34 17 chr10 7796779 7796838 -132519927 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 323 176 0 137 chr10 7796881 7796983 -132519782 + L1MC4 LINE L1 6616 6703 -1339 195 129 0 0 chr10 7796983 7797014 -132519751 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1673 160 29 13 chr10 7797568 7797861 -132518904 + AluJo SINE Alu 1 302 -10 1284 44 0 22 chr10 7797861 7798044 -132518721 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1673 160 29 13 chr10 7798044 7798056 -132518709 + AluJo SINE Alu 302 312 0 240 59 0 0 chr10 7798442 7798476 -132518289 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2085 71 0 4 chr10 7798477 7798746 -132518019 - L1PA5 LINE L1 -16 6138 5871 873 151 0 0 chr10 7798871 7799010 -132517755 + AluSg/x SINE Alu 155 293 -17 292 256 47 23 chr10 7799013 7799099 -132517666 + MIR SINE MIR 116 203 -59 2307 92 0 6 chr10 7800128 7800442 -132516323 - AluSq SINE Alu -1 312 1 329 303 96 34 chr10 7800498 7800676 -132516089 - MIR SINE MIR -71 191 3 317 322 109 12 chr10 7800944 7801154 -132515611 - MIR SINE MIR -11 251 21 2079 113 7 0 chr10 7801742 7802044 -132514721 - AluJo SINE Alu -8 304 1 1621 176 25 67 chr10 7802388 7802530 -132514235 + MER2 DNA MER2_type 1 147 -197 2226 113 0 0 chr10 7802530 7802840 -132513925 - AluSx SINE Alu -2 310 1 1621 176 25 67 chr10 7802840 7803056 -132513709 + MER2 DNA MER2_type 147 344 0 2218 114 0 0 chr10 7803895 7804201 -132512564 - AluSq SINE Alu -7 306 1 1839 147 6 28 chr10 7804508 7804827 -132511938 + AluJo SINE Alu 1 312 0 817 140 26 72 chr10 7804967 7805153 -132511612 + L1MB2 LINE L1 5987 6177 -12 27 0 0 0 chr10 7805550 7805577 -132511188 + AT_rich Low_complexity Low_complexity 1 27 0 2400 73 0 6 chr10 7805635 7805948 -132510817 + AluY SINE Alu 1 311 0 399 258 25 50 chr10 7806332 7806452 -132510313 - MIR SINE MIR -73 189 73 1637 161 17 14 chr10 7807155 7807447 -132509318 - AluJo SINE Alu -19 293 1 1118 337 94 18 chr10 7808208 7808822 -132507943 - L3 LINE CR1 -5 1572 912 453 275 19 16 chr10 7808831 7808999 -132507766 + MIR SINE MIR 30 195 -13 816 277 113 12 chr10 7809029 7809365 -132507400 + MLT1J LTR MaLR 87 456 -55 269 292 135 0 chr10 7809407 7809503 -132507262 + MIR SINE MIR 150 258 -4 330 301 45 85 chr10 7809854 7810100 -132506665 - L3 LINE CR1 -825 752 517 330 292 96 78 chr10 7810489 7810641 -132506124 - MIR SINE MIR -15 247 88 2217 100 3 0 chr10 7810641 7810940 -132505825 + AluSp SINE Alu 1 300 -13 330 292 96 78 chr10 7810940 7811006 -132505759 - MIR SINE MIR -174 88 25 2165 106 3 0 chr10 7811524 7811817 -132504948 - AluSx SINE Alu -18 294 1 1256 107 0 0 chr10 7812376 7812544 -132504221 + AluSx SINE Alu 1 168 -144 819 158 92 30 chr10 7812644 7812808 -132503957 - MER1B DNA MER1_type -85 212 39 1635 156 7 24 chr10 7812852 7813147 -132503618 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7813787 7813854 -132502911 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7813998 7814019 -132502746 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7814019 7814143 -132502622 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7815199 7815354 -132501411 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7815420 7815633 -132501132 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7816525 7816559 -132500206 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7816559 7816583 -132500182 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7816583 7816943 -132499822 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7817725 7817948 -132498817 - AluJb SINE Alu -18 294 72 1486 165 0 0 chr10 7817957 7818199 -132498566 - AluJb SINE Alu -52 260 19 277 157 0 0 chr10 7818308 7818384 -132498381 + Alu SINE Alu 247 322 0 642 200 74 0 chr10 7818616 7818751 -132498014 + L1ME3A LINE L1 6011 6155 -15 1060 90 0 0 chr10 7818811 7818944 -132497821 - FLAM_C SINE Alu 0 133 1 2067 102 7 7 chr10 7818953 7819256 -132497509 - AluSg SINE Alu -7 303 1 379 209 100 0 chr10 7819544 7819654 -132497111 - L1MB7 LINE L1 0 6184 6064 3400 112 23 6 chr10 7819702 7820222 -132496543 + L1MA3 LINE L1 5777 6305 0 1946 141 0 3 chr10 7820411 7820716 -132496049 - AluSx SINE Alu -8 304 1 670 222 250 28 chr10 7821027 7821239 -132495526 - MIR SINE MIR 0 262 4 2349 78 7 3 chr10 7821378 7821687 -132495078 - AluSx SINE Alu -2 310 1 245 339 51 8 chr10 7821779 7821897 -132494868 - L2 LINE L2 -4 3309 3187 186 71 0 0 chr10 7822908 7822936 -132493829 + (A)n Simple_repeat Simple_repeat 1 28 0 239 308 105 119 chr10 7823382 7823752 -132493013 + L2 LINE L2 2908 3272 0 2131 110 3 0 chr10 7823912 7824212 -132492553 - AluSx SINE Alu -11 301 1 573 225 38 127 chr10 7824533 7824800 -132491965 + MIR SINE MIR 20 262 0 292 205 121 12 chr10 7825133 7825216 -132491549 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7825225 7825453 -132491312 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7825527 7825555 -132491210 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7825714 7825910 -132490855 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7826200 7826325 -132490440 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7827382 7827420 -132489345 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7828214 7828412 -132488353 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7828886 7829188 -132487577 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7829577 7829636 -132487129 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7829636 7829937 -132486828 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7829975 7830104 -132486661 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7831000 7831045 -132485720 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7831172 7831452 -132485313 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7831452 7831631 -132485134 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7831829 7831915 -132484850 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7832728 7832778 -132483987 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7833028 7833336 -132483429 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7834938 7834971 -132481794 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7834971 7835264 -132481501 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7835264 7835276 -132481489 + (TC)n Simple_repeat Simple_repeat 34 45 0 360 309 18 0 chr10 7836174 7836284 -132480481 + L1MEd LINE L1 647 758 -5447 243 267 76 10 chr10 7836313 7836464 -132480301 + L1MEd LINE L1 1586 1912 -4304 1534 108 31 9 chr10 7836624 7836847 -132479918 - MER30 DNA MER1_type 0 230 3 2150 101 3 13 chr10 7837220 7837527 -132479238 + AluSq SINE Alu 1 304 -9 2036 115 3 0 chr10 7838800 7839096 -132477669 + AluSx SINE Alu 1 297 -15 858 209 78 57 chr10 7839754 7840175 -132476590 - L1MC5 LINE L1 -54 7907 7478 1531 171 60 17 chr10 7840224 7840523 -132476242 - AluJo SINE Alu 0 312 1 260 330 157 30 chr10 7840923 7841153 -132475612 + L3b LINE CR1 1249 1507 -76 558 308 122 9 chr10 7841520 7841734 -132475031 + MIR SINE MIR 6 243 -19 1750 149 66 30 chr10 7841753 7842115 -132474650 - THE1C LTR MaLR 0 375 1 2011 79 25 11 chr10 7842149 7842429 -132474336 + AluSq SINE Alu 1 284 -29 858 307 39 17 chr10 7842501 7842856 -132473909 + L1ME3 LINE L1 5795 6157 -5 294 284 94 0 chr10 7842993 7843120 -132473645 + L3 LINE CR1 1284 1422 -155 909 186 12 0 chr10 7843184 7843345 -132473420 + MER5A DNA MER1_type 2 164 -25 394 345 54 7 chr10 7844574 7844722 -132472043 + MIR SINE MIR 102 256 -6 2432 63 0 0 chr10 7845776 7846079 -132470686 + AluY SINE Alu 1 303 -8 2181 94 3 0 chr10 7846480 7846778 -132469987 + AluSp SINE Alu 1 299 -14 1596 114 121 11 chr10 7846790 7847054 -132469711 + AluSg1 SINE Alu 1 293 -16 281 206 0 22 chr10 7847073 7847165 -132469600 + L1MC4 LINE L1 6614 6703 -1339 1785 187 15 75 chr10 7847389 7847738 -132469027 + L1MB2 LINE L1 5779 6105 -66 2010 142 3 0 chr10 7847738 7848051 -132468714 + AluSx SINE Alu 1 314 0 1785 187 15 75 chr10 7848051 7848108 -132468657 + L1MB2 LINE L1 6105 6164 -7 837 186 132 0 chr10 7848884 7849051 -132467714 + MER53 DNA DNA 1 189 0 197 338 0 15 chr10 7849249 7849317 -132467448 - L2 LINE L2 -5 3267 3201 1428 45 6 0 chr10 7849391 7849570 -132467195 + L1PA8 LINE L1 5993 6172 0 180 0 0 0 chr10 7849584 7849604 -132467161 + (A)n Simple_repeat Simple_repeat 1 20 0 1878 163 9 34 chr10 7850045 7850081 -132466684 - L1MB5 LINE L1 -6 6168 6133 2396 90 0 10 chr10 7850081 7850393 -132466372 - AluSg SINE Alu -1 309 1 1878 163 9 34 chr10 7850393 7850705 -132466060 - L1MB5 LINE L1 -41 6133 5829 1066 200 19 0 chr10 7851618 7851828 -132464937 - L1MB5 LINE L1 -323 5851 5638 289 197 28 0 chr10 7852148 7852219 -132464546 - L1MB7 LINE L1 0 6184 6112 1657 176 59 7 chr10 7852380 7852794 -132463971 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7853116 7853286 -132463479 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7853782 7854091 -132462674 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7854177 7854242 -132462523 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7854242 7854473 -132462292 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7855508 7855750 -132461015 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7855800 7856111 -132460654 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7856946 7857080 -132459685 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7857102 7857189 -132459576 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7858538 7858715 -132458050 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7858737 7858763 -132458002 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7858764 7859056 -132457709 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7860312 7860734 -132456031 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7860767 7860922 -132455843 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7861088 7861556 -132455209 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7862141 7862164 -132454601 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7862173 7862490 -132454275 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7863525 7863569 -132453196 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7863596 7863724 -132453041 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7863742 7863774 -132452991 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7864907 7865317 -132451448 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7865348 7865503 -132451262 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7865950 7866239 -132450526 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7866239 7866430 -132450335 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7866531 7866715 -132450050 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7866673 7866864 -132449901 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7867233 7867406 -132449359 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7868383 7868580 -132448185 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7868720 7868920 -132447845 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7868924 7869015 -132447750 - L1P4 LINE L1 -329 5839 5753 618 120 22 11 chr10 7869123 7869215 -132447550 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7869235 7869480 -132447285 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7869480 7869518 -132447247 + Charlie8 DNA MER1_type 1378 1415 -1002 2174 87 30 33 chr10 7869853 7870152 -132446613 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7871049 7871224 -132445541 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7871388 7871452 -132445313 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7872202 7872262 -132444503 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7872345 7872643 -132444122 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7872992 7873193 -132443572 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7873193 7873533 -132443232 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7873533 7873880 -132442885 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7874706 7874854 -132441911 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7874890 7875040 -132441725 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7875111 7875398 -132441367 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7875783 7875907 -132440858 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7875937 7876219 -132440546 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7876389 7876879 -132439886 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7877021 7877043 -132439722 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7878291 7878580 -132438185 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7878585 7878621 -132438144 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7878709 7878787 -132437978 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7878805 7879106 -132437659 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7879106 7879411 -132437354 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7879413 7879482 -132437283 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7879741 7880109 -132436656 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7880109 7880180 -132436585 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7880501 7881107 -132435658 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7881159 7881458 -132435307 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7881465 7881493 -132435272 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7882972 7883306 -132433459 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7883766 7884068 -132432697 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7884146 7884432 -132432333 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7885390 7885483 -132431282 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7885503 7885557 -132431208 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7885565 7885749 -132431016 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7885749 7885886 -132430879 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7886184 7886482 -132430283 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7886484 7886634 -132430131 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7886881 7887079 -132429686 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7887461 7887678 -132429087 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7888800 7888843 -132427922 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7891184 7891241 -132425524 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7892115 7892265 -132424500 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7892787 7893069 -132423696 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7893300 7893427 -132423338 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7893427 7893591 -132423174 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7893700 7893745 -132423020 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7893743 7893811 -132422954 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7894097 7894308 -132422457 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7894565 7894768 -132421997 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7894966 7895008 -132421757 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7895148 7895187 -132421578 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7895445 7895774 -132420991 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7896842 7897142 -132419623 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7897760 7898214 -132418551 + MLT1A2 LTR MaLR 1 370 -4 4190 185 22 83 chr10 7898461 7898653 -132418112 + L1MD2 LINE L1 5093 5295 -1064 2285 93 0 17 chr10 7898653 7898953 -132417812 + AluSq SINE Alu 1 295 -18 4190 185 22 83 chr10 7898953 7899400 -132417365 + L1MD2 LINE L1 5295 5767 -592 1758 166 14 0 chr10 7899400 7899684 -132417081 - AluJo SINE Alu -19 293 6 4190 185 22 83 chr10 7899684 7899895 -132416870 + L1MD2 LINE L1 5767 5989 -370 2047 119 0 58 chr10 7899895 7900223 -132416542 + AluSg SINE Alu 2 310 0 4190 185 22 83 chr10 7900223 7900484 -132416281 + L1MD2 LINE L1 5989 6152 -207 339 25 0 0 chr10 7900484 7900524 -132416241 + (CA)n Simple_repeat Simple_repeat 1 40 0 4190 185 22 83 chr10 7900524 7900719 -132416046 + L1MD2 LINE L1 6152 6357 -2 1225 163 37 20 chr10 7900838 7901083 -132415682 - MLT2D LTR ERVL -165 249 1 1520 97 5 7 chr10 7901155 7901509 -132415256 - MSTA LTR MaLR 0 428 1 458 164 0 0 chr10 7901671 7901744 -132415021 + L1MB5 LINE L1 6069 6141 -33 1985 112 14 20 chr10 7901749 7902044 -132414721 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7902050 7902081 -132414684 + AT_rich Low_complexity Low_complexity 1 31 0 826 204 42 11 chr10 7902647 7902838 -132413927 - MIR SINE MIR 0 262 66 1350 195 101 0 chr10 7903022 7903471 -132413294 + AluJo SINE Alu 5 480 0 752 144 6 24 chr10 7903487 7903654 -132413111 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7903756 7903828 -132412937 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7903833 7904860 -132411905 + L1PA16 LINE L1 3343 4340 -1826 237 33 0 0 chr10 7904860 7904890 -132411875 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7904890 7906614 -132410151 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7906774 7907053 -132409712 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7907270 7907418 -132409347 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7907420 7907705 -132409060 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7907706 7907742 -132409023 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7907839 7908017 -132408748 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7908291 7908529 -132408236 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7909452 7909794 -132406971 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7909796 7910041 -132406724 + AluSx SINE Alu 1 298 -4 5780 71 0 4 chr10 7910041 7910743 -132406022 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7910949 7911330 -132405435 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7911618 7912066 -132404699 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7912066 7912206 -132404559 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7912206 7912495 -132404270 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7912495 7912690 -132404075 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7912701 7912810 -132403955 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7912810 7913171 -132403594 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7913171 7914737 -132402028 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7914737 7915094 -132401671 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7915094 7915268 -132401497 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7915392 7915758 -132401007 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7915758 7915800 -132400965 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7915800 7916482 -132400283 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7916664 7916970 -132399795 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7917415 7917701 -132399064 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7917722 7917994 -132398771 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7918930 7919030 -132397735 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7919554 7919648 -132397117 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7919669 7919976 -132396789 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7920064 7920085 -132396680 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7920184 7920207 -132396558 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7920402 7920480 -132396285 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7920718 7921009 -132395756 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7921184 7921238 -132395527 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7921682 7921887 -132394878 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7921990 7922294 -132394471 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7923273 7923563 -132393202 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7923568 7923857 -132392908 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7924569 7924635 -132392130 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7925153 7925260 -132391505 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7925281 7925954 -132390811 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7925964 7926008 -132390757 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7926018 7926106 -132390659 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7926170 7926282 -132390483 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7926396 7927092 -132389673 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7927092 7927382 -132389383 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7927382 7927493 -132389272 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7927493 7927805 -132388960 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7927805 7927871 -132388894 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7927971 7928100 -132388665 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7928102 7928203 -132388562 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7928766 7929052 -132387713 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7929063 7929441 -132387324 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7929663 7929751 -132387014 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7930071 7930153 -132386612 + AluY SINE Alu 2 83 -227 899 247 131 0 chr10 7930172 7930439 -132386326 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7930439 7930747 -132386018 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7931714 7931998 -132384767 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7932248 7932498 -132384267 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7932546 7932599 -132384166 + Alu SINE Alu 251 291 -11 754 186 16 0 chr10 7932801 7932925 -132383840 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7933581 7933923 -132382842 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7933956 7934001 -132382764 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7934136 7934317 -132382448 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7934887 7934945 -132381820 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7935387 7935698 -132381067 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7935772 7935993 -132380772 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7936034 7936549 -132380216 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7936539 7937825 -132378940 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7939479 7939789 -132376976 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7940131 7940431 -132376334 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7941635 7941936 -132374829 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7941953 7942214 -132374551 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7942229 7942291 -132374474 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7942559 7942875 -132373890 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7943670 7943964 -132372801 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7944265 7944571 -132372194 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7944571 7944732 -132372033 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7945461 7945607 -132371158 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7945897 7946101 -132370664 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7946151 7947059 -132369706 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7947551 7947631 -132369134 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7948077 7948385 -132368380 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7948387 7948689 -132368076 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7948976 7949106 -132367659 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7949111 7949185 -132367580 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7949185 7949700 -132367065 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7949700 7949723 -132367042 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7950176 7950198 -132366567 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7950400 7950767 -132365998 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7950971 7951198 -132365567 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7951247 7951581 -132365184 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7951615 7951655 -132365110 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7952108 7952394 -132364371 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7953561 7953748 -132363017 + L1ME4a LINE L1 5927 6121 0 1781 215 63 59 chr10 7954366 7954570 -132362195 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7954570 7954884 -132361881 + MER44D DNA MER2_type 1 609 0 1781 215 63 59 chr10 7954884 7955270 -132361495 + L1ME1 LINE L1 5771 6161 -5 1819 116 113 72 chr10 7955548 7955760 -132361005 + MER46B DNA MER2_type 1 109 -2622 2033 151 3 0 chr10 7955760 7956059 -132360706 + AluSx SINE Alu 11 310 -2 1819 116 113 72 chr10 7956059 7956192 -132360573 + MER46B DNA MER2_type 109 235 -1 2231 127 0 0 chr10 7957004 7957312 -132359453 + AluSx SINE Alu 1 308 -4 320 130 0 0 chr10 7957386 7957432 -132359333 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7958042 7958071 -132358694 + AT_rich Low_complexity Low_complexity 1 29 0 2370 93 3 3 chr10 7958907 7959209 -132357556 + AluSp SINE Alu 1 302 -11 1135 183 14 10 chr10 7959212 7959420 -132357345 + AluJo SINE Alu 6 214 -98 285 116 0 55 chr10 7959422 7959482 -132357283 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7959539 7959637 -132357128 + AT_rich Low_complexity Low_complexity 1 98 0 2194 114 0 3 chr10 7960770 7961067 -132355698 + AluSg SINE Alu 1 296 -14 217 326 128 47 chr10 7961144 7961316 -132355449 + L2 LINE L2 2748 2933 -381 223 354 40 10 chr10 7961413 7961512 -132355253 + L2 LINE L2 3148 3249 -23 2144 107 0 29 chr10 7961603 7961913 -132354852 + AluSx SINE Alu 1 301 -11 1996 147 6 16 chr10 7962266 7962580 -132354185 + AluSx SINE Alu 1 311 -1 2252 117 3 0 chr10 7962768 7963075 -132353690 + AluSx SINE Alu 5 312 0 230 328 123 23 chr10 7963668 7963839 -132352926 + MIR SINE MIR 4 191 -71 2373 79 0 0 chr10 7963969 7964259 -132352506 - AluSx SINE Alu -22 290 1 516 318 100 35 chr10 7964804 7965115 -132351650 - L3 LINE CR1 -521 1056 726 2275 121 0 6 chr10 7965639 7965954 -132350811 + AluSq SINE Alu 1 313 0 1627 209 58 62 chr10 7966858 7967361 -132349404 + MLT1D LTR MaLR 5 505 0 1190 181 23 9 chr10 7968002 7968223 -132348542 + MER58A DNA MER1_type 1 224 0 914 121 0 50 chr10 7968568 7968708 -132348057 + FLAM_A SINE Alu 1 133 0 642 238 88 59 chr10 7969130 7969403 -132347362 + MLT1L LTR MaLR 2 282 -333 351 242 91 10 chr10 7969515 7969614 -132347151 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7969746 7969775 -132346990 + AT_rich Low_complexity Low_complexity 1 29 0 2355 90 0 10 chr10 7969975 7970276 -132346489 + AluSg SINE Alu 1 298 -12 1807 139 4 4 chr10 7970287 7970561 -132346204 + AluSx SINE Alu 1 274 -38 1726 86 0 9 chr10 7970562 7970784 -132345981 + AluSg/x SINE Alu 87 306 -6 1669 161 16 30 chr10 7970795 7971100 -132345665 + AluJo SINE Alu 1 301 -11 697 198 10 134 chr10 7971293 7971569 -132345196 + L1ME3 LINE L1 5930 6170 0 2216 92 0 23 chr10 7971643 7971946 -132344819 + AluSx SINE Alu 1 296 -16 384 227 42 8 chr10 7971946 7972056 -132344709 + L2 LINE L2 3194 3310 -3 212 339 102 8 chr10 7972294 7972421 -132344344 - MIR SINE MIR -116 146 8 2180 119 0 0 chr10 7972486 7972796 -132343969 + AluSg SINE Alu 1 310 0 2131 110 7 0 chr10 7973153 7973455 -132343310 + AluSx SINE Alu 1 304 0 1829 136 39 29 chr10 7973545 7973853 -132342912 - MER2 DNA MER2_type -34 311 1 2040 142 0 19 chr10 7974418 7974728 -132342037 - AluSq SINE Alu -9 304 1 1558 167 92 4 chr10 7975497 7975615 -132341150 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7975615 7975640 -132341125 + (CA)n Simple_repeat Simple_repeat 2 26 0 1558 167 92 4 chr10 7975640 7975802 -132340963 + AluJb SINE Alu 107 306 -6 2002 131 3 7 chr10 7975803 7976109 -132340656 + AluSq SINE Alu 2 306 -7 526 170 107 0 chr10 7976124 7976236 -132340529 + Charlie1 DNA MER1_type 2622 2745 -16 196 293 48 75 chr10 7976384 7976531 -132340234 - L3 LINE CR1 -957 620 478 804 160 0 0 chr10 7976959 7977078 -132339687 + FLAM_C SINE Alu 12 130 -13 2137 120 0 3 chr10 7977522 7977821 -132338944 + AluSx SINE Alu 1 298 -14 789 136 36 0 chr10 7977823 7977933 -132338832 - AluJo/FLAM SINE Alu -192 120 7 485 228 205 29 chr10 7977955 7978126 -132338639 - MIR SINE MIR -2 260 60 377 284 0 0 chr10 7978403 7978505 -132338260 + MIR3 SINE MIR 91 192 -16 1911 141 7 34 chr10 7978978 7979276 -132337489 + AluJb SINE Alu 1 290 -22 2431 74 7 7 chr10 7979284 7979594 -132337171 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7980295 7980317 -132336448 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1859 155 13 23 chr10 7980333 7980636 -132336129 + AluSx SINE Alu 1 300 -12 2304 109 3 0 chr10 7980813 7981124 -132335641 - AluSx SINE Alu 0 312 1 1272 193 41 4 chr10 7981584 7981828 -132334937 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7982213 7982242 -132334523 + AT_rich Low_complexity Low_complexity 1 29 0 416 199 69 30 chr10 7982888 7983019 -132333746 + MIR SINE MIR 126 261 -1 2351 81 7 0 chr10 7983898 7984193 -132332572 + L1PA7 LINE L1 5858 6154 0 1397 163 68 44 chr10 7984541 7984835 -132331930 + AluJo SINE Alu 7 307 -5 463 290 20 132 chr10 7985598 7985946 -132330819 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7986041 7986062 -132330703 + AT_rich Low_complexity Low_complexity 1 21 0 2191 124 3 0 chr10 7986669 7986975 -132329790 - AluSq SINE Alu -5 308 2 203 235 20 0 chr10 7988348 7988399 -132328366 - L3 LINE CR1 -1 1576 1525 352 271 192 6 chr10 7988706 7988883 -132327882 - L3 LINE CR1 -48 1529 1320 457 246 39 68 chr10 7988918 7988970 -132327795 + L1MC5 LINE L1 7717 7769 -192 2518 51 3 0 chr10 7988970 7989263 -132327502 - AluY SINE Alu -17 294 1 457 246 39 68 chr10 7989263 7989417 -132327348 + L1MC5 LINE L1 7769 7917 -44 289 376 102 0 chr10 7989442 7989639 -132327126 - L3 LINE CR1 -310 1267 1051 3006 82 0 0 chr10 7990033 7990410 -132326355 - L1PA8 LINE L1 0 6172 5796 441 277 97 9 chr10 7990800 7990989 -132325776 - MER20B DNA MER1_type -8 211 6 1339 220 125 9 chr10 7991226 7991553 -132325212 - MLT1A1 LTR MaLR 0 365 1 2114 134 0 0 chr10 7991950 7992249 -132324516 + AluY SINE Alu 1 299 -12 1266 199 83 11 chr10 7992834 7993100 -132323665 - AluJo SINE Alu -27 285 1 2634 42 0 3 chr10 7993277 7993583 -132323182 - AluY SINE Alu -6 305 1 186 276 153 20 chr10 7993689 7993787 -132322978 - L2 LINE L2 0 3313 3203 305 220 34 0 chr10 7993960 7994019 -132322746 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7994011 7994141 -132322624 - MER2 DNA MER2_type -96 143 1 2255 106 0 0 chr10 7994252 7994544 -132322221 + AluSc SINE Alu 1 292 -17 241 221 176 0 chr10 7994598 7994666 -132322099 - L2 LINE L2 -1 3312 3233 1224 210 52 21 chr10 7994849 7995139 -132321626 - AluSx SINE Alu -13 299 1 1575 133 18 0 chr10 7995165 7995390 -132321375 - AluSq SINE Alu -82 231 3 1667 172 3 10 chr10 7995566 7995862 -132320903 + AluSx SINE Alu 1 294 -18 2309 89 7 20 chr10 7996064 7996367 -132320398 - AluSq SINE Alu -14 299 1 1033 210 109 58 chr10 7997111 7997558 -132319207 - MLT1D LTR MaLR -5 462 1 1901 122 22 0 chr10 7997642 7997912 -132318853 - L1PA15 LINE L1 -3 6162 5887 466 250 21 0 chr10 7998370 7998466 -132318299 - MER91A DNA MER1_type -2 194 97 1373 152 0 17 chr10 7998675 7998906 -132317859 + AluJo SINE Alu 86 312 0 492 141 0 0 chr10 7998922 7999003 -132317762 + L1PB4 LINE L1 5874 5954 -200 796 235 7 0 chr10 7999115 7999264 -132317501 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 8001419 8001489 -132315276 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 8001925 8002228 -132314537 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 8002760 8002818 -132313947 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 8003260 8003572 -132313193 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 8003646 8003867 -132312898 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 8003908 8004423 -132312342 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 8004462 8005699 -132311066 - L2 LINE L2 -764 2550 1191 1835 148 0 48 chr10 8007353 8007663 -132309102 - AluJb SINE Alu -12 300 6 2159 106 3 3 chr10 8008005 8008289 -132308476 + AluSq SINE Alu 2 285 -28 524 141 113 42 chr10 8008304 8008446 -132308319 + Charlie1 DNA MER1_type 2604 2755 -6 423 241 25 137 chr10 8008527 8008629 -132308136 - MIR SINE MIR -38 224 163 2006 115 14 14 chr10 8008629 8008924 -132307841 - AluSg SINE Alu -15 295 1 423 241 25 137 chr10 8008924 8009062 -132307703 - MIR SINE MIR -99 163 11 312 134 152 27 chr10 8010278 8010390 -132306375 + MER113 DNA MER1_type? 123 248 -273 1820 160 7 17 chr10 8010530 8010830 -132305935 + AluJo SINE Alu 1 297 -15 512 237 100 73 chr10 8010839 8011197 -132305568 + L1MC4 LINE L1 7083 7458 -584 1864 163 3 10 chr10 8011197 8011498 -132305267 + AluJb SINE Alu 1 299 -13 512 237 100 73 chr10 8011498 8011537 -132305228 + L1MC4 LINE L1 7458 7494 -548 1998 124 3 65 chr10 8011740 8012063 -132304702 + AluSx SINE Alu 1 303 -9 1410 154 0 0 chr10 8012148 8012368 -132304397 + L1MC1 LINE L1 6013 6232 -101 238 257 34 40 chr10 8012476 8012624 -132304141 + L1MC5 LINE L1 7631 7777 -184 1454 197 47 63 chr10 8012673 8013053 -132303712 + MLT1A2 LTR MaLR 1 374 0 549 252 28 69 chr10 8013351 8013569 -132303196 - MIR SINE MIR -53 209 1 217 239 0 0 chr10 8013569 8013613 -132303152 + L2 LINE L2 3266 3309 -4 516 254 73 6 chr10 8016938 8017115 -132299650 + MIR SINE MIR 33 221 -41 2396 91 0 0 chr10 8017249 8017545 -132299220 + AluSc SINE Alu 1 296 -13 553 195 0 49 chr10 8018512 8018635 -132298130 + AluJb SINE Alu 181 297 -15 3557 240 168 30 chr10 8018635 8019342 -132297423 - L1MC2 LINE L1 -216 6128 5520 2311 87 3 7 chr10 8019342 8019641 -132297124 - AluSg SINE Alu -12 298 1 3557 240 168 30 chr10 8019641 8021036 -132295729 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8021361 8021395 -132295370 + AT_rich Low_complexity Low_complexity 1 34 0 2583 57 0 0 chr10 8022811 8023112 -132293653 - AluY SINE Alu -10 301 1 532 227 37 114 chr10 8023465 8023738 -132293027 - MIR SINE MIR -2 260 9 2281 103 0 22 chr10 8024450 8024633 -132292132 - AluSx SINE Alu 0 312 137 2120 86 41 7 chr10 8024633 8024924 -132291841 - AluY SINE Alu -10 301 1 2281 103 0 22 chr10 8024924 8025059 -132291706 - AluSx SINE Alu -175 137 1 2190 80 7 0 chr10 8026435 8026710 -132290055 - AluY SINE Alu -21 290 14 2378 101 0 0 chr10 8026715 8027022 -132289743 - AluSx SINE Alu -5 307 1 337 242 124 25 chr10 8027413 8027574 -132289191 + MER104 DNA Tc2 4 180 0 1742 134 180 0 chr10 8027790 8028096 -132288669 - MER46B DNA MER2_type 0 236 1 789 157 109 58 chr10 8029522 8029795 -132286970 + MER2 DNA MER2_type 2 320 -25 340 214 111 56 chr10 8030175 8030301 -132286464 - L2 LINE L2 -9 3304 3172 453 225 217 0 chr10 8030334 8030463 -132286302 + MER58C DNA MER1_type 59 215 0 319 323 90 62 chr10 8030542 8030997 -132285768 + L2 LINE L2 2804 3271 -1 264 194 56 14 chr10 8031353 8031425 -132285340 + MIR SINE MIR 77 151 -111 2549 69 0 0 chr10 8031689 8031994 -132284771 + AluY SINE Alu 1 305 -6 1737 145 4 0 chr10 8032025 8032273 -132284492 + AluJo SINE Alu 1 249 -63 2393 68 10 7 chr10 8032593 8032889 -132283876 + AluSx SINE Alu 1 297 -15 899 159 173 30 chr10 8033495 8033748 -132283017 - Charlie1b DNA MER1_type -244 279 1 1847 123 55 44 chr10 8034277 8034570 -132282195 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8034794 8034858 -132281907 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8035157 8035181 -132281584 + (TG)n Simple_repeat Simple_repeat 1 24 0 814 125 33 0 chr10 8035214 8035334 -132281431 - FLAM_C SINE Alu -5 128 5 439 225 231 0 chr10 8035490 8035663 -132281102 + MIR SINE MIR 45 257 -5 249 251 124 115 chr10 8035706 8036029 -132280736 - L2 LINE L2 -20 3252 2927 1820 146 43 0 chr10 8036261 8036542 -132280223 - AluSx SINE Alu -19 293 1 486 200 20 0 chr10 8037108 8037208 -132279557 - L1MB7 LINE L1 -1 6183 6082 194 275 20 114 chr10 8037356 8037505 -132279260 - L2 LINE L2 -954 2360 2226 1499 170 4 0 chr10 8037578 8037813 -132278952 + AluJb SINE Alu 2 237 -75 1175 142 0 0 chr10 8037814 8037983 -132278782 + AluSg/x SINE Alu 141 309 -3 1572 267 37 12 chr10 8038009 8038160 -132278605 + L1MC4a LINE L1 6453 6599 -1209 2285 76 10 3 chr10 8038160 8038451 -132278314 + AluSx SINE Alu 2 294 -18 1572 267 37 12 chr10 8038451 8038782 -132277983 + L1MC4a LINE L1 6599 6947 -861 1966 107 55 4 chr10 8038804 8039098 -132277667 + AluSq SINE Alu 2 309 0 277 280 19 0 chr10 8039105 8039212 -132277553 + L1MC4 LINE L1 7689 7797 -245 1088 207 118 7 chr10 8039227 8039531 -132277234 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8039534 8039619 -132277146 + C-rich Low_complexity Low_complexity 4 87 0 304 227 94 70 chr10 8039628 8039756 -132277009 + LTR16A LTR ERVL 320 450 0 658 202 82 91 chr10 8039757 8040000 -132276765 + HERV16 LTR ERVL 2 242 -4754 1157 292 85 16 chr10 8040129 8041102 -132275663 + HERV16 LTR ERVL 1584 2670 -2326 1204 185 39 5 chr10 8041102 8041307 -132275458 + Tigger5 DNA MER2_type 1 212 -2111 271 146 0 0 chr10 8041320 8041361 -132275404 + MERVL LTR ERVL 4353 4393 -1092 798 358 26 18 chr10 8041408 8041624 -132275141 + MERVL LTR ERVL 4525 4738 -1026 1300 195 30 47 chr10 8041624 8041922 -132274843 - AluJo SINE Alu -15 297 5 798 358 26 18 chr10 8041922 8042161 -132274604 + MERVL LTR ERVL 4738 4984 -780 750 261 122 30 chr10 8042663 8042992 -132273773 + LTR16A LTR ERVL 92 450 0 737 239 32 24 chr10 8043004 8043251 -132273514 + L1MC4 LINE L1 7793 8041 -1 203 300 0 12 chr10 8043362 8043442 -132273323 - L2 LINE L2 -1326 1988 1910 234 0 0 0 chr10 8044044 8044070 -132272695 + (A)n Simple_repeat Simple_repeat 1 26 0 389 186 21 21 chr10 8044116 8044213 -132272552 + MER96B DNA MER1_type? 278 374 -43 204 195 0 0 chr10 8046548 8046589 -132270176 + L2 LINE L2 3273 3313 0 1971 151 0 0 chr10 8046694 8046986 -132269779 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8047131 8047156 -132269609 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 257 315 56 0 chr10 8047560 8047649 -132269116 - L2 LINE L2 -9 3263 3170 934 190 0 6 chr10 8049158 8049321 -132267444 + AluJb SINE Alu 137 298 -14 382 236 22 0 chr10 8049389 8049478 -132267287 - L2 LINE L2 -4 3309 3219 1639 182 3 18 chr10 8049541 8049827 -132266938 + AluJo SINE Alu 1 282 -30 2342 91 7 0 chr10 8049827 8050124 -132266641 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8050162 8050183 -132266582 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8050433 8050462 -132266303 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8051529 8052179 -132264586 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8052629 8052660 -132264105 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8053393 8053564 -132263201 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8053579 8053690 -132263075 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8053690 8053999 -132262766 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8053999 8054158 -132262607 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8054292 8054443 -132262322 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8054942 8055248 -132261517 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8055357 8056117 -132260648 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8056444 8056557 -132260208 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8056665 8056847 -132259918 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8057979 8058024 -132258741 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8058201 8058452 -132258313 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8058971 8059126 -132257639 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8060014 8060464 -132256301 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8060608 8060965 -132255800 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8060970 8061249 -132255516 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8061349 8061405 -132255360 - AluJo SINE Alu -258 42 1 319 279 62 0 chr10 8061405 8061534 -132255231 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8061534 8061694 -132255071 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8061694 8062000 -132254765 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8062000 8062158 -132254607 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8062165 8062679 -132254086 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8063232 8063359 -132253406 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8064096 8064119 -132252646 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8064351 8064380 -132252385 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8065047 8065069 -132251696 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8065245 8065486 -132251279 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8065499 8065778 -132250987 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8065832 8066260 -132250505 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8066286 8066559 -132250206 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8066560 8066809 -132249956 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8067722 8067859 -132248906 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8068009 8068520 -132248245 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8068930 8069225 -132247540 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8069969 8070072 -132246693 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8070230 8070276 -132246489 - FRAM/FAM SINE Alu -120 46 1 23 54 0 0 chr10 8070791 8070828 -132245937 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8070891 8071007 -132245758 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8071162 8071390 -132245375 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8071574 8071830 -132244935 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8071836 8071911 -132244854 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8072221 8072389 -132244376 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8072531 8072698 -132244067 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8073252 8073550 -132243215 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8073766 8074075 -132242690 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8075002 8075202 -132241563 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8075678 8075794 -132240971 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8076296 8076659 -132240106 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8077086 8077667 -132239098 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8077689 8077957 -132238808 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8078327 8078635 -132238130 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8078635 8079204 -132237561 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8079204 8079495 -132237270 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8079495 8079725 -132237040 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8079731 8079767 -132236998 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8079777 8080251 -132236514 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8080255 8080387 -132236378 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8080387 8080701 -132236064 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8080701 8080769 -132235996 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8080769 8080849 -132235916 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8080849 8080917 -132235848 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8080897 8081412 -132235353 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8081850 8081889 -132234876 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8081885 8082287 -132234478 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8082292 8082373 -132234392 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8082969 8083191 -132233574 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8083781 8084129 -132232636 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8084129 8084425 -132232340 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8084425 8084650 -132232115 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8084797 8084932 -132231833 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8084932 8085200 -132231565 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8085200 8085212 -132231553 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8085212 8085514 -132231251 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8085514 8085683 -132231082 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8085858 8086037 -132230728 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8086206 8086533 -132230232 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8086761 8086799 -132229966 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8087342 8087430 -132229335 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8088009 8088303 -132228462 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8088688 8089002 -132227763 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8089115 8089243 -132227522 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8089720 8089745 -132227020 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8090016 8090311 -132226454 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8090565 8090660 -132226105 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8090982 8091260 -132225505 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8092218 8092527 -132224238 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8092658 8093051 -132223714 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8093804 8094107 -132222658 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8094320 8095286 -132221479 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8095306 8095597 -132221168 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8095597 8095620 -132221145 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8095620 8095923 -132220842 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8095923 8096062 -132220703 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8096925 8097124 -132219641 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8097516 8097821 -132218944 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8098233 8098527 -132218238 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8098527 8098567 -132218198 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8098750 8099336 -132217429 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8099349 8099621 -132217144 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8099623 8099925 -132216840 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8099944 8100081 -132216684 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8100089 8100889 -132215876 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8100898 8101927 -132214838 - MER63D DNA MER1_type 0 1061 2 1791 242 112 105 chr10 8102759 8103643 -132213122 + HAL1 LINE L1 1 877 -1630 787 135 0 15 chr10 8103643 8103776 -132212989 + FLAM_C SINE Alu 3 133 0 1791 242 112 105 chr10 8103776 8104044 -132212721 + HAL1 LINE L1 877 1165 -1342 2142 65 41 27 chr10 8104044 8104338 -132212427 + AluSx SINE Alu 1 298 -14 1791 242 112 105 chr10 8104338 8104416 -132212349 + HAL1 LINE L1 1165 1241 -1266 809 201 22 0 chr10 8104470 8104649 -132212116 + L1MC5 LINE L1 6694 6876 -1085 1775 235 37 8 chr10 8104663 8105148 -132211617 + MER63C DNA MER1_type 1 499 -431 222 282 0 39 chr10 8106504 8106582 -132210183 + MIR SINE MIR 180 254 -8 204 235 0 0 chr10 8106646 8106714 -132210051 + (TG)n Simple_repeat Simple_repeat 1 68 0 270 299 39 0 chr10 8106749 8106826 -132209939 + L2 LINE L2 2990 3069 -244 2336 58 4 0 chr10 8106826 8107158 -132209607 + AluY SINE Alu 7 339 0 504 263 72 13 chr10 8107539 8107691 -132209074 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8107828 8108145 -132208620 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8108367 8108628 -132208137 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8108628 8108805 -132207960 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8108805 8109102 -132207663 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8109102 8109245 -132207520 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8109245 8109396 -132207369 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8109408 8110297 -132206468 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8110357 8110882 -132205883 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8110883 8111013 -132205752 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8111013 8111168 -132205597 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8111168 8111467 -132205298 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8111472 8111568 -132205197 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8111568 8111601 -132205164 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8111604 8111740 -132205025 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8111760 8112148 -132204617 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8112149 8112406 -132204359 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8112404 8112487 -132204278 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8112484 8112782 -132203983 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8113025 8113355 -132203410 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8114048 8114529 -132202236 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8114816 8115129 -132201636 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8115592 8116013 -132200752 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8116360 8116608 -132200157 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8116660 8116819 -132199946 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8116946 8116969 -132199796 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8117086 8117114 -132199651 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8117298 8117609 -132199156 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8119125 8119433 -132197332 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8119903 8119931 -132196834 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8120769 8120811 -132195954 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8122334 8122362 -132194403 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8123647 8123737 -132193028 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8125336 8125505 -132191260 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8125849 8125952 -132190813 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8126091 8126275 -132190490 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8126383 8126433 -132190332 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8126434 8126715 -132190050 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8126786 8126807 -132189958 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8127615 8127946 -132188819 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8128644 8128951 -132187814 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8129161 8129203 -132187562 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8129403 8129553 -132187212 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8130049 8130099 -132186666 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8130242 8130434 -132186331 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8130474 8131463 -132185302 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8131463 8131869 -132184896 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8131869 8132081 -132184684 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8132081 8132376 -132184389 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8132376 8132748 -132184017 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8132748 8132937 -132183828 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8132938 8132977 -132183788 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8132977 8133281 -132183484 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8133616 8133917 -132182848 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8134195 8134366 -132182399 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8134642 8134945 -132181820 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8135155 8135193 -132181572 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8136016 8136642 -132180123 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8137006 8137247 -132179518 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8137282 8138020 -132178745 + L2 LINE L2 2246 3078 -194 236 280 101 0 chr10 8141754 8141875 -132174890 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8143478 8143578 -132173187 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8143652 8144116 -132172649 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8144154 8144677 -132172088 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8144939 8145140 -132171625 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8145377 8145558 -132171207 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8145593 8145712 -132171053 + HsTC2b DNA Tc2 806 911 -7 1598 167 3 84 chr10 8146953 8147276 -132169489 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8147518 8148015 -132168750 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8148097 8148224 -132168541 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8148280 8148410 -132168355 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8148596 8148900 -132167865 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8148994 8149241 -132167524 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8149352 8149755 -132167010 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8151205 8151248 -132165517 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8152210 8152394 -132164371 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8152416 8152602 -132164163 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 73 0 chr10 8152797 8152981 -132163784 + AluSg/x SINE Alu 112 305 -7 253 228 0 0 chr10 8153049 8153106 -132163659 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8153346 8153644 -132163121 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8153645 8153675 -132163090 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8153765 8153837 -132162928 + L2 LINE L2 3127 3191 -81 2313 91 30 0 chr10 8154235 8154533 -132162232 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8154817 8154861 -132161904 + (TA)n Simple_repeat Simple_repeat 1 44 0 1552 166 30 51 chr10 8156109 8156405 -132160360 + AluJo SINE Alu 1 290 -22 687 258 307 7 chr10 8156625 8157034 -132159731 + MLT1F1 LTR MaLR 40 567 0 1098 276 64 66 chr10 8157584 8158103 -132158662 + L1MC4 LINE L1 5941 6460 -1433 2301 82 13 38 chr10 8158103 8158420 -132158345 - AluSc SINE Alu 0 309 1 1098 276 64 66 chr10 8158420 8158455 -132158310 + L1MC4 LINE L1 6460 6494 -1399 893 102 8 8 chr10 8158455 8158573 -132158192 + FLAM_C SINE Alu 1 118 -15 1098 276 64 66 chr10 8158573 8158988 -132157777 + L1MC4 LINE L1 6494 7006 -887 253 272 0 16 chr10 8158988 8159113 -132157652 + GA-rich Low_complexity Low_complexity 2 124 0 276 253 117 101 chr10 8159169 8159626 -132157139 + L1MC4 LINE L1 7000 7448 -594 1978 139 0 0 chr10 8159626 8159899 -132156866 + AluJo SINE Alu 1 273 -39 276 253 117 101 chr10 8159899 8160273 -132156492 + L1MC4 LINE L1 7448 7965 -77 233 323 0 23 chr10 8161389 8161522 -132155243 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8161782 8161820 -132154945 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8161892 8161950 -132154815 + (TATG)n Simple_repeat Simple_repeat 3 58 0 577 275 53 6 chr10 8163803 8163974 -132152791 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8164275 8164305 -132152460 + AT_rich Low_complexity Low_complexity 1 30 0 1578 174 50 30 chr10 8164334 8164503 -132152262 - AluJo SINE Alu -8 304 125 2016 129 61 3 chr10 8164503 8164797 -132151968 - AluSx SINE Alu -1 311 1 1578 174 50 30 chr10 8164797 8164925 -132151840 - AluJo SINE Alu -187 125 1 409 246 27 27 chr10 8165439 8165549 -132151216 + L1ME LINE L1 5520 5629 -492 310 283 53 33 chr10 8165556 8165708 -132151057 + L1ME LINE L1 5672 5826 -295 1875 165 20 3 chr10 8165768 8166065 -132150700 - AluJb SINE Alu -10 302 1 2252 112 0 0 chr10 8167021 8167324 -132149441 + AluSx SINE Alu 1 303 -9 1002 164 0 0 chr10 8169233 8169413 -132147352 - AluJb SINE Alu 0 315 136 325 161 36 0 chr10 8170085 8170141 -132146624 + MLT1K LTR MaLR 531 588 0 2046 123 0 17 chr10 8170419 8170720 -132146045 + AluSx SINE Alu 15 310 -2 23 86 0 0 chr10 8171049 8171107 -132145658 + AT_rich Low_complexity Low_complexity 1 58 0 715 174 90 7 chr10 8173101 8173256 -132143509 - MER58 DNA MER1_type -173 168 1 2461 83 0 6 chr10 8173727 8174040 -132142725 - AluY SINE Alu 0 311 1 1030 146 6 6 chr10 8174043 8174208 -132142557 - FRAM SINE Alu -12 164 1 1277 133 0 15 chr10 8176385 8176400 -132140365 + AluSg/x SINE Alu 121 135 -177 2068 97 45 3 chr10 8176400 8176688 -132140077 + AluY SINE Alu 1 300 -11 1277 133 0 15 chr10 8176688 8176867 -132139898 + AluSg/x SINE Alu 135 312 0 262 281 0 0 chr10 8177117 8177192 -132139573 - MER20 DNA MER1_type -23 196 118 205 309 15 15 chr10 8177417 8177485 -132139280 + L2 LINE L2 3197 3264 -8 246 316 38 0 chr10 8177648 8177727 -132139038 + L2 LINE L2 3208 3289 -24 2328 90 10 0 chr10 8178009 8178310 -132138455 - AluSx SINE Alu -8 304 1 1389 224 126 43 chr10 8178310 8178864 -132137901 - L1MC5 LINE L1 -435 7526 6927 1914 102 0 0 chr10 8178879 8179123 -132137642 - AluSx SINE Alu -19 293 50 1511 172 0 44 chr10 8179821 8180117 -132136648 + AluJb SINE Alu 23 305 -7 368 298 51 6 chr10 8180398 8180556 -132136209 - L1ME LINE L1 -382 6237 6073 833 279 124 29 chr10 8181900 8182480 -132134285 - L1ME LINE L1 -3400 3244 2610 1594 199 7 0 chr10 8182726 8183033 -132133732 + Charlie1 DNA MER1_type 2057 2365 -396 1131 125 52 102 chr10 8183037 8183080 -132133685 + Charlie1 DNA MER1_type 2472 2516 -245 818 178 0 0 chr10 8183080 8183209 -132133556 + FLAM_A SINE Alu 1 129 -4 1131 125 52 102 chr10 8183209 8183356 -132133409 + Charlie1 DNA MER1_type 2516 2644 -117 1964 147 13 3 chr10 8183356 8183663 -132133102 - AluSx SINE Alu -2 310 1 1131 125 52 102 chr10 8183663 8183776 -132132989 + Charlie1 DNA MER1_type 2644 2761 0 811 308 97 19 chr10 8183776 8184405 -132132360 - L1ME LINE L1 -4680 2145 1300 383 293 87 45 chr10 8184467 8184709 -132132056 - L1ME LINE L1 -5264 1370 1119 731 273 32 67 chr10 8185175 8185363 -132131402 + MIR SINE MIR 1 179 -83 2234 108 0 7 chr10 8185363 8185495 -132131270 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8185495 8185540 -132131225 + (CA)n Simple_repeat Simple_repeat 2 46 0 2234 108 0 7 chr10 8185540 8185704 -132131061 + AluSp SINE Alu 132 295 -18 731 273 32 67 chr10 8185704 8185768 -132130997 + MIR SINE MIR 179 244 -18 243 338 27 0 chr10 8185743 8185817 -132130948 + L2 LINE L2 3186 3261 -11 * 263 288 40 45 chr10 8186461 8186659 -132130106 + L1ME3A LINE L1 5756 5952 -218 432 0 0 0 chr10 8186878 8186926 -132129839 + (TA)n Simple_repeat Simple_repeat 1 48 0 426 330 124 5 chr10 8186949 8187167 -132129598 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8187170 8187263 -132129502 - MIR SINE MIR -152 110 13 2332 98 0 7 chr10 8187408 8187714 -132129051 - AluSx SINE Alu -8 304 1 364 247 104 26 chr10 8187877 8188031 -132128734 - MLT1I LTR MaLR -14 395 230 225 273 23 31 chr10 8188458 8188586 -132128179 + C-rich Low_complexity Low_complexity 5 131 0 864 166 7 7 chr10 8188769 8188920 -132127845 - FRAM SINE Alu -25 151 1 2334 91 10 3 chr10 8188928 8189235 -132127530 - AluSq SINE Alu -4 309 1 1621 181 21 3 chr10 8189235 8189522 -132127243 - AluJb SINE Alu -19 293 1 2199 104 7 10 chr10 8189940 8190238 -132126527 + AluSq SINE Alu 1 297 -16 1587 158 9 70 chr10 8190561 8190891 -132125874 - AluJo SINE Alu -2 310 1 253 253 21 63 chr10 8191034 8191129 -132125636 + MIR3 SINE MIR 103 193 -15 1841 168 3 13 chr10 8191211 8191520 -132125245 + AluJb SINE Alu 1 306 -6 232 382 0 0 chr10 8191610 8191686 -132125079 + MIR SINE MIR 64 139 -69 23 68 0 0 chr10 8194835 8194879 -132121886 + AT_rich Low_complexity Low_complexity 1 44 0 187 298 107 12 chr10 8194910 8194994 -132121771 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8195396 8195424 -132121341 + AT_rich Low_complexity Low_complexity 1 28 0 375 170 0 0 chr10 8198602 8198678 -132118087 - AluJb SINE Alu 0 305 230 895 172 86 6 chr10 8198680 8198854 -132117911 - AluJb SINE Alu -124 188 1 2008 119 3 17 chr10 8198864 8199166 -132117599 - AluSx SINE Alu -14 298 1 2509 55 6 6 chr10 8199310 8199621 -132117144 - AluY SINE Alu 0 311 1 203 278 44 67 chr10 8199624 8199714 -132117051 - L2 LINE L2 0 3272 3185 2402 91 0 0 chr10 8199918 8200215 -132116550 + AluSq SINE Alu 1 297 -16 1641 158 21 32 chr10 8200522 8200829 -132115936 + AluJo SINE Alu 1 304 0 2077 119 17 3 chr10 8200830 8201132 -132115633 + AluSc SINE Alu 1 306 -3 988 98 0 0 chr10 8201153 8201285 -132115480 - AluSq/x SINE Alu -181 132 1 2054 108 4 4 chr10 8202062 8202340 -132114425 - AluSc SINE Alu -31 278 1 696 153 21 162 chr10 8202381 8202567 -132114198 + MER3 DNA MER1_type 1 147 -62 1594 189 3 24 chr10 8202567 8202863 -132113902 - AluJo SINE Alu -22 290 1 696 153 21 162 chr10 8202863 8202917 -132113848 + MER3 DNA MER1_type 147 207 -2 2210 48 0 11 chr10 8203599 8204069 -132112696 + AluY SINE Alu 1 282 -29 1591 6 0 0 chr10 8203890 8204134 -132112631 + (GAAA)n Simple_repeat Simple_repeat 2 423 0 1826 152 14 3 chr10 8204142 8204433 -132112332 + AluJo SINE Alu 5 296 -16 312 27 0 0 chr10 8205498 8205535 -132111230 + (TA)n Simple_repeat Simple_repeat 1 37 0 2132 105 3 7 chr10 8205535 8205831 -132110934 - AluSx SINE Alu -17 295 1 1247 122 0 0 chr10 8206950 8207130 -132109635 - AluSg/x SINE Alu -5 307 128 213 39 0 0 chr10 8207140 8207166 -132109599 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8207243 8207570 -132109195 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8207570 8207871 -132108894 + AluSq SINE Alu 1 301 -12 1974 116 0 24 chr10 8208165 8208280 -132108485 + AluSx SINE Alu 22 138 -174 2211 82 0 0 chr10 8208280 8208599 -132108166 + AluSg SINE Alu 1 319 0 1974 116 0 24 chr10 8208599 8208774 -132107991 + AluSx SINE Alu 138 306 -6 1693 171 10 0 chr10 8209074 8209373 -132107392 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8210970 8211261 -132105504 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8212052 8212071 -132104694 + AluSg/x SINE Alu 113 135 -165 288 105 0 0 chr10 8212071 8212109 -132104656 + Alu SINE Alu 3 40 -262 239 150 25 0 chr10 8212274 8212314 -132104451 + Alu SINE Alu 1 41 -92 1432 150 70 42 chr10 8212440 8212726 -132104039 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8212833 8213117 -132103648 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8216579 8216708 -132100057 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8217268 8217333 -132099432 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8217455 8217479 -132099286 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8218576 8218637 -132098128 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8219859 8219884 -132096881 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8219884 8219923 -132096842 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8226406 8226449 -132090316 + (TG)n Simple_repeat Simple_repeat 1 43 0 217 143 0 24 chr10 8228687 8228729 -132088036 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 249 219 0 0 chr10 8228835 8228908 -132087857 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8229735 8229763 -132087002 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8230670 8230692 -132086073 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8231254 8231283 -132085482 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8234187 8234239 -132082526 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8234519 8234580 -132082185 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8240822 8240846 -132075919 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8242116 8242139 -132074626 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8244024 8244084 -132072681 + (T)n Simple_repeat Simple_repeat 1 60 0 2230 98 3 0 chr10 8245006 8245311 -132071454 - AluSx SINE Alu -6 306 1 228 67 0 0 chr10 8245455 8245485 -132071280 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8245717 8245776 -132070989 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8246185 8246216 -132070549 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2414 61 3 3 chr10 8247291 8247602 -132069163 + AluY SINE Alu 1 311 0 2097 109 0 3 chr10 8248232 8248526 -132068239 + AluSx SINE Alu 9 301 -11 277 285 30 79 chr10 8250842 8251007 -132065758 - MIR SINE MIR -46 216 60 2404 78 0 0 chr10 8252618 8252926 -132063839 + AluSg SINE Alu 1 308 -2 180 77 0 0 chr10 8253451 8253477 -132063288 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8254250 8254299 -132062466 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8255986 8256011 -132060754 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8256026 8256328 -132060437 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8256774 8256798 -132059967 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8257010 8257322 -132059443 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8258006 8258138 -132058627 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8258209 8258514 -132058251 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8258580 8258885 -132057880 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8259175 8259195 -132057570 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8259955 8260227 -132056538 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8260230 8260275 -132056490 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8261193 8261315 -132055450 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8261324 8261436 -132055329 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8261818 8262058 -132054707 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8262689 8262999 -132053766 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8264065 8264372 -132052393 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8265279 8265537 -132051228 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8265638 8265978 -132050787 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8266594 8266720 -132050045 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8266785 8267077 -132049688 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8267362 8267532 -132049233 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8267771 8268061 -132048704 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8268073 8268396 -132048369 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8268951 8268986 -132047779 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8268986 8269299 -132047466 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8269318 8269595 -132047170 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8269977 8270221 -132046544 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8270257 8270278 -132046487 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8270873 8271179 -132045586 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8271444 8271727 -132045038 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8272676 8272770 -132043995 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8272785 8272918 -132043847 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8272956 8273242 -132043523 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8273244 8273287 -132043478 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8273319 8273501 -132043264 + AluSg/x SINE Alu 132 310 0 2006 132 0 0 chr10 8274453 8274741 -132042024 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8274874 8275008 -132041757 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8276121 8276149 -132040616 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8276151 8276429 -132040336 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8276460 8276674 -132040091 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8276737 8276808 -132039957 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8276876 8276990 -132039775 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8277002 8277201 -132039564 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8278013 8278112 -132038653 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8278270 8278315 -132038450 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8278394 8278691 -132038074 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8278697 8278750 -132038015 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8278752 8279048 -132037717 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8279272 8279304 -132037461 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8279675 8279775 -132036990 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8280065 8280237 -132036528 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8280610 8280656 -132036109 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8280718 8281030 -132035735 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8282004 8282290 -132034475 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8282331 8282624 -132034141 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8285563 8286039 -132030726 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8286039 8286255 -132030510 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8286588 8286809 -132029956 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8286839 8287020 -132029745 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8287021 8287181 -132029584 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8288088 8288121 -132028644 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8288121 8288418 -132028347 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8288418 8288485 -132028280 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8288689 8288996 -132027769 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8289926 8290251 -132026514 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8290463 8290664 -132026101 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8291253 8291383 -132025382 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8291661 8291718 -132025047 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8291724 8292007 -132024758 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8292640 8292681 -132024084 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8292863 8293008 -132023757 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8293015 8293162 -132023603 - MIR3 SINE MIR -33 175 23 1022 146 6 0 chr10 8293913 8294078 -132022687 - AluJb SINE Alu -11 301 136 619 284 83 17 chr10 8294437 8294667 -132022098 - MIR SINE MIR -13 249 4 1601 178 7 3 chr10 8295109 8295401 -132021364 + AluJo SINE Alu 1 293 -19 1910 139 0 3 chr10 8295403 8295691 -132021074 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8295704 8295738 -132021027 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 359 278 35 66 chr10 8295747 8295945 -132020820 - MIR3 SINE MIR -15 193 2 1778 152 20 3 chr10 8296734 8297030 -132019735 - AluJb SINE Alu -11 301 1 273 269 0 0 chr10 8297078 8297130 -132019635 + AluJ/monomer SINE Alu 1 52 -248 222 220 0 0 chr10 8297467 8297526 -132019239 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8297935 8297966 -132018799 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8299041 8299352 -132017413 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8299982 8300276 -132016489 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8302592 8302757 -132014008 - MIR SINE MIR -46 216 60 2410 66 0 0 chr10 8304369 8304671 -132012094 + AluSg SINE Alu 1 302 -8 1983 126 10 3 chr10 8304702 8305003 -132011762 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8305628 8305665 -132011100 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8306032 8306645 -132010120 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8306749 8308272 -132008493 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8308556 8308843 -132007922 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8308970 8309245 -132007520 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8309259 8309301 -132007464 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8309306 8309356 -132007409 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8310460 8310678 -132006087 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8312244 8312270 -132004495 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8312592 8312616 -132004149 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8314025 8314046 -132002719 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8314528 8314834 -132001931 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8314938 8315042 -132001723 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8317205 8317332 -131999433 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8318406 8318670 -131998095 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8318926 8319220 -131997545 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8319830 8319871 -131996894 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8320169 8320370 -131996395 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8321450 8321502 -131995263 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8321676 8321986 -131994779 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8322857 8322981 -131993784 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8322979 8323386 -131993379 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8323443 8323763 -131993002 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8324052 8324215 -131992550 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8324215 8324534 -131992231 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8324536 8324823 -131991942 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8324823 8325312 -131991453 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8325729 8326868 -131989897 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8326957 8327161 -131989604 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8327530 8328049 -131988716 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8328093 8328342 -131988423 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8328546 8328798 -131987967 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8328798 8328842 -131987923 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8328842 8329524 -131987241 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8329659 8329692 -131987073 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8329893 8330209 -131986556 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8330495 8330539 -131986226 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8331960 8332146 -131984619 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8332168 8332352 -131984413 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8333314 8333357 -131983408 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8334807 8335210 -131981555 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8335321 8335568 -131981197 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8335662 8335966 -131980799 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8336152 8336282 -131980483 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8336338 8336465 -131980300 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8336547 8337044 -131979721 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8337286 8337611 -131979154 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8338853 8338972 -131977793 - HsTC2b DNA Tc2 -2 916 811 597 271 33 11 chr10 8339007 8339188 -131977577 - HsTC2b DNA Tc2 -686 229 45 220 363 25 55 chr10 8339425 8339626 -131977139 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8339888 8340411 -131976354 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8340449 8340913 -131975852 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8340987 8341087 -131975678 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8342690 8342811 -131973954 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8345211 8345419 -131971346 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8345419 8345430 -131971335 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8345430 8345715 -131971050 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8345715 8345740 -131971025 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8346842 8346870 -131969895 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8347017 8347050 -131969715 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8347119 8347140 -131969625 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8347525 8347578 -131969187 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8347619 8347769 -131968996 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8348075 8348361 -131968404 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8348361 8348385 -131968380 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8348709 8348758 -131968007 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8349577 8349633 -131967132 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8349651 8349898 -131966867 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8351063 8351371 -131965394 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8352193 8352248 -131964517 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8352788 8353042 -131963723 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8354329 8354431 -131962334 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8354579 8354650 -131962115 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8354802 8354947 -131961818 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8356168 8356197 -131960568 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8356244 8356374 -131960391 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8356895 8356964 -131959801 + MIR SINE MIR 176 250 -12 723 244 87 30 chr10 8357798 8358028 -131958737 - MIR SINE MIR -19 243 1 1113 193 193 12 chr10 8358248 8358360 -131958405 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8358360 8358391 -131958374 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 193 193 12 chr10 8358391 8358527 -131958238 + AluJo SINE Alu 91 294 -8 22 35 0 0 chr10 8358656 8358685 -131958080 + AT_rich Low_complexity Low_complexity 1 29 0 254 199 15 31 chr10 8359008 8359083 -131957682 + MIR SINE MIR 12 85 -123 320 252 70 0 chr10 8359540 8359655 -131957110 - MIR SINE MIR -45 217 95 235 296 12 0 chr10 8359820 8359901 -131956864 - MIR3 SINE MIR -2 206 125 347 228 152 0 chr10 8361658 8361750 -131955015 - MER94 DNA DNA -10 124 19 259 293 199 18 chr10 8362217 8362436 -131954329 + MIR SINE MIR 7 262 0 213 170 21 21 chr10 8362883 8362930 -131953835 + L2 LINE L2 3214 3260 -12 2054 122 0 0 chr10 8363068 8363347 -131953418 + AluSg SINE Alu 1 279 -31 432 37 0 0 chr10 8363350 8363404 -131953361 + (CA)n Simple_repeat Simple_repeat 2 55 0 2371 87 7 0 chr10 8364012 8364311 -131952454 + AluSc SINE Alu 1 301 -8 220 316 38 0 chr10 8364593 8364672 -131952093 - L2 LINE L2 -24 3289 3208 185 309 15 15 chr10 8364835 8364903 -131951862 - L2 LINE L2 -8 3264 3197 261 281 0 0 chr10 8365128 8365203 -131951562 + MER20 DNA MER1_type 118 196 -23 1297 128 0 15 chr10 8365453 8365632 -131951133 - AluSg/x SINE Alu 0 312 135 2113 94 45 3 chr10 8365632 8365920 -131950845 - AluY SINE Alu -11 300 1 1297 128 0 15 chr10 8365920 8365935 -131950830 - AluSg/x SINE Alu -177 135 121 242 239 0 0 chr10 8366869 8366915 -131949850 - L2 LINE L2 -90 3182 3137 1754 152 24 14 chr10 8366988 8367284 -131949481 + AluJo SINE Alu 1 299 -13 277 346 155 30 chr10 8367489 8367818 -131948947 - L2 LINE L2 -548 2766 2397 691 190 0 0 chr10 8368280 8368396 -131948369 - FRAM SINE Alu -20 156 41 23 0 0 0 chr10 8368492 8368515 -131948250 + AT_rich Low_complexity Low_complexity 1 23 0 2462 72 0 13 chr10 8368653 8368957 -131947808 + AluSp SINE Alu 1 300 -13 630 226 0 0 chr10 8370046 8370161 -131946604 + AluJb SINE Alu 2 116 -196 240 86 0 0 chr10 8370164 8370199 -131946566 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 906 127 95 104 chr10 8370741 8370962 -131945803 - AluJo SINE Alu -19 293 75 2549 66 0 3 chr10 8370962 8371267 -131945498 - AluY SINE Alu -5 306 3 524 250 0 0 chr10 8371979 8372095 -131944670 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8372557 8372886 -131943879 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8373091 8373387 -131943378 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8373460 8373506 -131943259 + L2 LINE L2 3137 3182 -90 662 66 72 12 chr10 8374136 8374302 -131942463 + (TCTA)n Simple_repeat Simple_repeat 4 179 0 730 83 59 12 chr10 8374340 8374509 -131942256 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 464 198 0 0 chr10 8374509 8374590 -131942175 - FLAM_A SINE Alu -22 120 40 2212 113 0 0 chr10 8375011 8375303 -131941462 - AluSx SINE Alu -9 303 12 1569 161 73 11 chr10 8375492 8375808 -131940957 + AluJb SINE Alu 1 312 0 419 241 169 76 chr10 8376926 8377019 -131939746 - L2 LINE L2 -860 2454 2371 1142 112 0 6 chr10 8377019 8377198 -131939567 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1481 175 34 11 chr10 8377204 8377472 -131939293 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8377475 8377647 -131939118 - FAM SINE Alu -1 174 1 419 241 169 76 chr10 8377647 8377832 -131938933 - L2 LINE L2 -948 2366 2138 808 126 0 44 chr10 8378389 8378524 -131938241 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8379057 8379319 -131937446 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8379925 8380025 -131936740 - MIR SINE MIR -62 146 63 188 283 62 26 chr10 8381191 8381304 -131935461 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8381348 8381451 -131935314 + MIR SINE MIR 131 236 -26 2061 137 7 10 chr10 8381830 8382136 -131934629 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8382174 8382267 -131934498 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8383107 8383157 -131933608 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8383157 8383468 -131933297 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8383468 8383521 -131933244 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8383625 8383928 -131932837 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8384211 8384308 -131932457 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8385331 8385536 -131931229 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8385691 8385928 -131930837 - L1ME4a LINE L1 -1 6120 5852 2382 100 0 0 chr10 8385968 8386279 -131930486 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8386606 8386867 -131929898 - AluJo SINE Alu -50 262 3 2003 143 0 19 chr10 8387028 8387335 -131929430 - AluSx SINE Alu -11 301 1 225 278 31 10 chr10 8388841 8388938 -131927827 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8389226 8389298 -131927467 + (CA)n Simple_repeat Simple_repeat 2 73 0 2202 110 0 10 chr10 8389308 8389618 -131927147 - AluSx SINE Alu -5 307 1 332 291 10 65 chr10 8390705 8390765 -131926000 - MER5A DNA MER1_type -1 188 126 1808 147 3 52 chr10 8390765 8391072 -131925693 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8391072 8391210 -131925555 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8392794 8392824 -131923941 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 23 54 0 0 chr10 8392868 8392905 -131923860 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 8393272 8393293 -131923472 + AT_rich Low_complexity Low_complexity 1 21 0 1576 199 31 0 chr10 8393601 8393887 -131922878 - AluJb SINE Alu -17 295 1 376 306 25 0 chr10 8396712 8396833 -131919932 + MIR SINE MIR 28 151 -111 702 77 0 0 chr10 8396840 8396931 -131919834 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8396936 8397032 -131919733 + MIR SINE MIR 150 247 -15 629 270 54 5 chr10 8397543 8397728 -131919037 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8398297 8398414 -131918351 - HAL1 LINE L1 0 2507 2389 717 142 35 0 chr10 8398422 8398535 -131918230 - FLAM_A SINE Alu -10 132 16 983 249 127 53 chr10 8398536 8398907 -131917858 - HAL1 LINE L1 -127 2380 2038 2180 126 0 13 chr10 8398907 8399217 -131917548 + AluSx SINE Alu 1 306 -6 983 249 127 53 chr10 8399217 8399491 -131917274 - HAL1 LINE L1 -469 2038 1687 703 212 53 11 chr10 8399488 8399677 -131917088 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8399680 8399800 -131916965 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8400079 8400215 -131916550 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8400371 8400689 -131916076 + AluJo SINE Alu 1 304 -8 743 176 7 54 chr10 8400738 8400886 -131915879 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8401894 8402082 -131914683 - MER53 DNA DNA 0 189 11 29 0 0 0 chr10 8402211 8402240 -131914525 + AT_rich Low_complexity Low_complexity 1 29 0 686 203 16 0 chr10 8402240 8402363 -131914402 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8402555 8402707 -131914058 + FRAM SINE Alu 5 156 -10 239 333 15 0 chr10 8402975 8403041 -131913724 + (CACG)n Simple_repeat Simple_repeat 4 70 0 240 86 0 0 chr10 8403041 8403076 -131913689 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8403748 8404029 -131912736 + L1ME4a LINE L1 5625 5916 -205 303 262 66 16 chr10 8404157 8404279 -131912486 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8404547 8404724 -131912041 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8404724 8404784 -131911981 - AluS SINE Alu -248 60 1 2275 78 10 0 chr10 8405387 8405681 -131911084 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8405900 8406202 -131910563 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8406388 8406683 -131910082 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8406704 8406884 -131909881 - L1MC1 LINE L1 -190 6126 5951 887 114 0 0 chr10 8406884 8406998 -131909767 - AluJo SINE Alu -20 292 179 823 183 8 0 chr10 8406997 8407128 -131909637 - AluJo SINE Alu -179 133 2 * 4100 153 3 16 chr10 8407130 8407823 -131908942 - L1MC1 LINE L1 -358 5958 5275 395 159 0 0 chr10 8408659 8408728 -131908037 - L1M LINE L1 -984 5343 5275 215 191 95 0 chr10 8409732 8409774 -131906991 + L2 LINE L2 3175 3220 -52 212 274 89 44 chr10 8409819 8409954 -131906811 - L2 LINE L2 -11 3302 3162 265 174 0 0 chr10 8410048 8410094 -131906671 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8410101 8410199 -131906566 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8410476 8410591 -131906174 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8412216 8412623 -131904142 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8413173 8413203 -131903562 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8415051 8415349 -131901416 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8416694 8417194 -131899571 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8417274 8417457 -131899308 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8417457 8417755 -131899010 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8417755 8418042 -131898723 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8418045 8418397 -131898368 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8418468 8418748 -131898017 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8418773 8419005 -131897760 - L1MC1 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8419001 8419640 -131897125 - L1MC1 LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8419640 8419997 -131896768 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8419997 8420195 -131896570 - L1MC1 LINE L1 -3904 2225 2031 935 254 68 66 chr10 8420450 8421460 -131895305 - L1MC1 LINE L1 -4646 1664 604 221 172 16 0 chr10 8421943 8422007 -131894758 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8422012 8422041 -131894724 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8422120 8422247 -131894518 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8422264 8422556 -131894209 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8422918 8422988 -131893777 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8422988 8423377 -131893388 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8423638 8423809 -131892956 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8423814 8423840 -131892925 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8423967 8424447 -131892318 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8424784 8424892 -131891873 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8424892 8425186 -131891579 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8425186 8425198 -131891567 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8425215 8425276 -131891489 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8425342 8425500 -131891265 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8427344 8427637 -131889128 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8427697 8428007 -131888758 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8428033 8428059 -131888706 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8428934 8429234 -131887531 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8429373 8429672 -131887093 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8429759 8430018 -131886747 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8430203 8430225 -131886540 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8430874 8431158 -131885607 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8431337 8431459 -131885306 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8431619 8431881 -131884884 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8432204 8432836 -131883929 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8434357 8434529 -131882236 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8434983 8435079 -131881686 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8435163 8435306 -131881459 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8436903 8437079 -131879686 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8437084 8437351 -131879414 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8437669 8437828 -131878937 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8437826 8437877 -131878888 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8437917 8438208 -131878557 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8438277 8438575 -131878190 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8439213 8439518 -131877247 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8440168 8440312 -131876453 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8440395 8440439 -131876326 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8440852 8441151 -131875614 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8441155 8441188 -131875577 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8441188 8441453 -131875312 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8441453 8441618 -131875147 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8441724 8442017 -131874748 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8442380 8442521 -131874244 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8442622 8442961 -131873804 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8443149 8443253 -131873512 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8443267 8443341 -131873424 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8443473 8443594 -131873171 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8443616 8443968 -131872797 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8444288 8444324 -131872441 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8444429 8444745 -131872020 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8444909 8445127 -131871638 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8445216 8445573 -131871192 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8445675 8445989 -131870776 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8446171 8446293 -131870472 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8447094 8447391 -131869374 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8447787 8447963 -131868802 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8447963 8448243 -131868522 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8448477 8448798 -131867967 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8448816 8448876 -131867889 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8448876 8449007 -131867758 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8449402 8449688 -131867077 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8449695 8449728 -131867037 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8449730 8449853 -131866912 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8449998 8450516 -131866249 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8450641 8450935 -131865830 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8451014 8451317 -131865448 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8451596 8451680 -131865085 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8452198 8452286 -131864479 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8452286 8452554 -131864211 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8452554 8452697 -131864068 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8453068 8453115 -131863650 + (TA)n Simple_repeat Simple_repeat 2 50 0 25 0 0 0 chr10 8453115 8453140 -131863625 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8453520 8453571 -131863194 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8453630 8453924 -131862841 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8454145 8454166 -131862599 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8454546 8454804 -131861961 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8454804 8455098 -131861667 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8455098 8455621 -131861144 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8456039 8456127 -131860638 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8456550 8456572 -131860193 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8456688 8456990 -131859775 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8457861 8458168 -131858597 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8458193 8458248 -131858517 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8458544 8458685 -131858080 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8458742 8459191 -131857574 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8459972 8460277 -131856488 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8460643 8460923 -131855842 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8460990 8461180 -131855585 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8463015 8463164 -131853601 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8463168 8463405 -131853360 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8464114 8464304 -131852461 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8464511 8464605 -131852160 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8464605 8464898 -131851867 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8464898 8464984 -131851781 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8465009 8465119 -131851646 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8465119 8465381 -131851384 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8465915 8466225 -131850540 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8466456 8466603 -131850162 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8466603 8466903 -131849862 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8466903 8467018 -131849747 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8467356 8467591 -131849174 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8467591 8467910 -131848855 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8467922 8468017 -131848748 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8468045 8468118 -131848647 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8468966 8469074 -131847691 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8469122 8469159 -131847606 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8469159 8469540 -131847225 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8469547 8469702 -131847063 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8470309 8470466 -131846299 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8470604 8470686 -131846079 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8470694 8470994 -131845771 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8471400 8471443 -131845322 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8471662 8471972 -131844793 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8472223 8472530 -131844235 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8472820 8472923 -131843842 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8473021 8473095 -131843670 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8473477 8473732 -131843033 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8474151 8474458 -131842307 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8475179 8475226 -131841539 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8477192 8477507 -131839258 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8478617 8478778 -131837987 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8478936 8478992 -131837773 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8479247 8479541 -131837224 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8479706 8479834 -131836931 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8480973 8481286 -131835479 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8481320 8481632 -131835133 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8481655 8481824 -131834941 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8481859 8481949 -131834816 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8482045 8482089 -131834676 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8482089 8482207 -131834558 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8483925 8484230 -131832535 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8486641 8487049 -131829716 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8487049 8487135 -131829630 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8487485 8487513 -131829252 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8487541 8487653 -131829112 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8487694 8487994 -131828771 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8489448 8489470 -131827295 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8489701 8489876 -131826889 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8490771 8490843 -131825922 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8491286 8491566 -131825199 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8492436 8492499 -131824266 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8492590 8492825 -131823940 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8492940 8493060 -131823705 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8494136 8494298 -131822467 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8494306 8494389 -131822376 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8494389 8494508 -131822257 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8494628 8495255 -131821510 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8495848 8496131 -131820634 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8496619 8496649 -131820116 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8497172 8497333 -131819432 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8497380 8497436 -131819329 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8497436 8497661 -131819104 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8497661 8497723 -131819042 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8497825 8497838 -131818927 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8497838 8498239 -131818526 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8498239 8498766 -131817999 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8498956 8499057 -131817708 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8499583 8499620 -131817145 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8499672 8499876 -131816889 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8500267 8500416 -131816349 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8500416 8500954 -131815811 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8500954 8500994 -131815771 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8501756 8501874 -131814891 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8502126 8502270 -131814495 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8502648 8502761 -131814004 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8503130 8503187 -131813578 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8503982 8504463 -131812302 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8504885 8504950 -131811815 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8505489 8505683 -131811082 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8505685 8505738 -131811027 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8506403 8506580 -131810185 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8508480 8508586 -131808179 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8508694 8508964 -131807801 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8509026 8509219 -131807546 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8509229 8509677 -131807088 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8509692 8510018 -131806747 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8510225 8510517 -131806248 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8510898 8510922 -131805843 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8511465 8511500 -131805265 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8512296 8512440 -131804325 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8512618 8512666 -131804099 + L2 LINE L2 3213 3260 -12 396 339 23 28 chr10 8512772 8512949 -131803816 - MIR SINE MIR -74 188 13 4283 127 30 6 chr10 8513433 8514073 -131802692 + L1PA16 LINE L1 5503 6157 -9 300 210 0 0 chr10 8514074 8514155 -131802610 + (TA)n Simple_repeat Simple_repeat 2 82 0 316 292 11 0 chr10 8514155 8514244 -131802521 + L1MC4 LINE L1 6614 6703 -1339 2078 125 7 0 chr10 8514890 8515179 -131801586 + AluSp SINE Alu 14 304 -9 851 263 50 118 chr10 8515683 8516219 -131800546 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8517011 8517032 -131799733 + AT_rich Low_complexity Low_complexity 1 21 0 1819 173 69 0 chr10 8518338 8518673 -131798092 - MER47A DNA MER2_type -1 365 8 2004 125 7 14 chr10 8518896 8519192 -131797573 + AluSx SINE Alu 1 294 -18 310 267 149 37 chr10 8519503 8519664 -131797101 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8519668 8520155 -131796610 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8520155 8520196 -131796569 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8520202 8520363 -131796402 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8520363 8520421 -131796344 + AT_rich Low_complexity Low_complexity 1 58 0 235 306 294 8 chr10 8522248 8522493 -131794272 + L3 LINE CR1 1138 1452 -125 263 300 130 63 chr10 8522534 8522881 -131793884 - L2 LINE L2 -36 3236 2867 810 179 0 15 chr10 8523273 8523407 -131793358 - AluJb SINE Alu -179 133 2 22 70 0 0 chr10 8523961 8524004 -131792761 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8524048 8524094 -131792671 + AT_rich Low_complexity Low_complexity 1 46 0 1882 141 21 3 chr10 8524714 8524998 -131791767 + AluJb SINE Alu 1 289 -23 840 117 54 7 chr10 8524998 8525719 -131791046 + (TA)n Simple_repeat Simple_repeat 1 754 0 528 141 0 116 chr10 8525855 8525908 -131790857 - MER33 DNA MER1_type -2476 109 76 2162 127 0 0 chr10 8525908 8526208 -131790557 - AluSx SINE Alu -12 300 1 528 141 0 116 chr10 8526208 8526275 -131790490 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8527545 8527787 -131788978 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1091 173 0 11 chr10 8527791 8527976 -131788789 - AluSq SINE Alu -13 300 118 760 132 7 44 chr10 8528081 8528217 -131788548 - LTR9 LTR ERV1 -481 131 1 383 259 175 21 chr10 8529822 8529965 -131786800 - MIR3 SINE MIR -27 181 17 489 130 13 0 chr10 8530147 8530224 -131786541 + MADE1 DNA Mariner 3 80 0 2203 110 0 0 chr10 8530290 8530581 -131786184 - AluSq SINE Alu -18 295 5 551 319 40 22 chr10 8531170 8531396 -131785369 - MIR SINE MIR 0 262 33 936 216 0 55 chr10 8531453 8531671 -131785094 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8531811 8531919 -131784846 + GA-rich Low_complexity Low_complexity 4 113 0 2281 108 7 0 chr10 8532135 8532440 -131784325 + AluSx SINE Alu 1 307 -5 214 356 67 0 chr10 8532641 8532731 -131784034 - MIR3 SINE MIR -24 184 89 304 276 243 17 chr10 8534614 8534795 -131781970 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8536126 8536159 -131780606 + (T)n Simple_repeat Simple_repeat 1 33 0 445 274 9 9 chr10 8536558 8536664 -131780101 + L2 LINE L2 3208 3313 0 5777 22 5 2 chr10 8537672 8538308 -131778457 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8538631 8538667 -131778098 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2413 76 0 16 chr10 8539104 8539420 -131777345 + AluSx SINE Alu 1 311 -1 185 250 50 75 chr10 8540026 8540106 -131776659 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8542100 8542162 -131774603 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 967 272 25 0 chr10 8543258 8543501 -131773264 - MIR SINE MIR -11 251 3 660 249 83 50 chr10 8543956 8544197 -131772568 - MIR SINE MIR -10 252 4 3373 170 45 5 chr10 8544329 8545006 -131771759 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8545519 8545567 -131771198 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8545655 8545678 -131771087 + AT_rich Low_complexity Low_complexity 1 23 0 198 293 183 0 chr10 8545738 8545820 -131770945 - MER5C DNA MER1_type 0 324 228 181 156 0 0 chr10 8545833 8545865 -131770900 - MER5C DNA MER1_type -201 123 92 242 307 0 13 chr10 8546460 8546535 -131770230 + L1ME LINE L1 5582 5655 -466 304 269 182 50 chr10 8546965 8547207 -131769558 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8547209 8547289 -131769476 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8547326 8547452 -131769313 + CT-rich Low_complexity Low_complexity 2 131 0 1159 238 13 36 chr10 8547802 8548104 -131768661 + MLT1F LTR MaLR 43 337 -205 1864 171 50 26 chr10 8548131 8548510 -131768255 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8548757 8548828 -131767937 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 360 235 35 0 chr10 8548856 8548941 -131767824 - MER39B LTR ERV1 -311 342 255 225 0 0 0 chr10 8548956 8548981 -131767784 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8549023 8549051 -131767714 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8549052 8549178 -131767587 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8549179 8549219 -131767546 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1775 185 7 0 chr10 8549230 8549522 -131767243 - AluJb SINE Alu -16 296 3 1652 132 87 3 chr10 8549523 8549811 -131766954 - MER39 LTR ERV1 -394 313 2 576 214 7 62 chr10 8549811 8549947 -131766818 + MLT1F LTR MaLR 405 532 -35 888 106 159 33 chr10 8550102 8550253 -131766512 - AluSg/x SINE Alu -7 303 134 2443 73 0 0 chr10 8552249 8552551 -131764214 - AluY SINE Alu -9 302 1 245 341 79 5 chr10 8554438 8554620 -131762145 + MIR3 SINE MIR 12 207 -1 1367 173 11 50 chr10 8555545 8555938 -131760827 - AluJo SINE Alu 0 419 38 1578 270 110 33 chr10 8555985 8556601 -131760164 + HAL1 LINE L1 1629 2323 -184 877 172 0 8 chr10 8556601 8556735 -131760030 + FLAM_C SINE Alu 1 133 0 1578 270 110 33 chr10 8556735 8556929 -131759836 + HAL1 LINE L1 2323 2501 -6 298 238 148 10 chr10 8557303 8557404 -131759361 + L2 LINE L2 3199 3313 0 331 362 65 0 chr10 8557471 8557703 -131759062 + L2 LINE L2 2638 2884 -430 372 164 0 0 chr10 8558231 8558298 -131758467 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8559402 8559556 -131757209 - MIR SINE MIR -86 176 1 310 321 21 86 chr10 8559625 8559671 -131757094 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8559671 8559972 -131756793 + AluSx SINE Alu 1 300 -12 310 321 21 86 chr10 8559972 8560065 -131756700 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8560933 8561112 -131755653 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8561264 8561334 -131755431 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8561620 8561900 -131754865 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8561940 8561963 -131754802 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8561965 8562326 -131754439 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8563470 8563506 -131753259 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8565118 8565167 -131751598 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8568226 8568606 -131748159 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8568950 8569262 -131747503 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8569416 8569742 -131747023 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8569777 8570050 -131746715 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8570059 8570494 -131746271 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8571249 8571363 -131745402 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8571670 8571971 -131744794 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8572222 8572650 -131744115 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8572785 8572905 -131743860 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8577126 8577171 -131739594 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8579133 8579449 -131737316 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8580926 8581006 -131735759 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8581043 8581220 -131735545 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8582176 8582204 -131734561 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8582204 8582282 -131734483 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8582282 8582409 -131734356 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8582418 8582470 -131734295 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8582470 8582583 -131734182 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8582588 8582643 -131734122 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8582767 8582977 -131733788 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8584504 8584623 -131732142 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8584623 8584677 -131732088 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8584677 8585310 -131731455 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8585360 8585609 -131731156 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8585713 8586230 -131730535 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8586230 8586542 -131730223 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8587481 8587535 -131729230 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8588342 8588438 -131728327 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8588431 8588474 -131728291 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8588606 8588771 -131727994 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8589021 8589191 -131727574 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8589605 8589849 -131726916 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8589998 8590035 -131726730 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8590042 8590190 -131726575 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8590356 8590381 -131726384 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8590850 8591077 -131725688 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8591078 8591161 -131725604 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8591549 8591852 -131724913 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8592372 8592534 -131724231 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8592758 8592814 -131723951 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8592814 8593099 -131723666 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8593872 8593963 -131722802 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8594094 8594838 -131721927 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8594855 8594982 -131721783 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8594982 8595418 -131721347 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8595418 8595716 -131721049 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8596186 8596463 -131720302 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8596530 8596654 -131720111 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8596788 8596932 -131719833 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8597004 8597410 -131719355 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8597420 8597607 -131719158 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8598302 8598474 -131718291 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8598540 8598620 -131718145 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8599135 8599447 -131717318 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8599541 8599719 -131717046 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8601243 8601823 -131714942 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8601948 8602089 -131714676 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8602338 8602466 -131714299 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8604348 8604369 -131712396 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8604748 8605041 -131711724 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8605333 8605644 -131711121 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8608446 8608657 -131708108 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8608729 8609079 -131707686 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8609082 8609160 -131707605 + L2 LINE L2 3188 3272 0 864 128 0 14 chr10 8610124 8610312 -131706453 + (TTCC)n Simple_repeat Simple_repeat 1 185 0 200 108 0 27 chr10 8610396 8610433 -131706332 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8610495 8610556 -131706209 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8611481 8611536 -131705229 + (TG)n Simple_repeat Simple_repeat 1 54 0 2517 153 9 24 chr10 8612686 8613111 -131703654 + MSTA LTR MaLR 1 419 -9 339 117 0 7 chr10 8613213 8613464 -131703301 + AluSg1 SINE Alu 1 325 0 566 49 12 0 chr10 8614739 8614821 -131701944 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8615801 8615947 -131700818 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8616338 8616817 -131699948 + (TA)n Simple_repeat Simple_repeat 1 436 0 235 61 61 51 chr10 8616802 8616900 -131699865 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 1787 138 35 21 chr10 8619925 8620214 -131696551 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8620502 8620542 -131696223 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8620720 8620974 -131695791 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8621561 8621682 -131695083 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8621780 8621902 -131694863 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8622427 8622543 -131694222 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8622598 8622708 -131694057 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8622869 8623073 -131693692 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8623059 8623329 -131693436 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8624486 8624599 -131692166 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8624673 8624997 -131691768 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8626291 8626393 -131690372 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8627371 8627661 -131689104 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8628765 8628880 -131687885 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8630644 8630886 -131685879 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8631006 8631109 -131685656 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8632231 8632261 -131684504 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8632261 8632579 -131684186 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8632579 8632657 -131684108 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8633680 8633746 -131683019 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8633867 8634165 -131682600 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8634656 8634965 -131681800 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8635043 8635174 -131681591 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8635257 8635308 -131681457 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8635320 8635751 -131681014 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8635751 8636405 -131680360 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8636405 8636556 -131680209 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8636556 8636843 -131679922 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8636843 8637004 -131679761 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8637216 8637336 -131679429 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8638020 8638364 -131678401 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8638597 8638927 -131677838 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8639205 8639257 -131677508 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8639451 8639584 -131677181 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8639651 8639944 -131676821 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8640260 8640912 -131675853 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8641261 8641378 -131675387 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8642214 8642494 -131674271 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8643119 8643314 -131673451 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8643315 8643338 -131673427 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8643342 8643530 -131673235 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8643548 8643568 -131673197 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8643581 8643856 -131672909 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8644333 8644626 -131672139 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8644626 8645128 -131671637 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8645128 8645274 -131671491 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8645274 8645544 -131671221 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8645565 8645651 -131671114 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8645651 8645806 -131670959 + MER96 DNA MER1_type 3 175 0 564 279 105 39 chr10 8645806 8646128 -131670637 - L2 LINE L2 -692 2622 2266 240 343 52 0 chr10 8646303 8646437 -131670328 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8646446 8646647 -131670118 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8646650 8646891 -131669874 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8646907 8647201 -131669564 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8647238 8647446 -131669319 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8647599 8647911 -131668854 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8647911 8648035 -131668730 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8648036 8648317 -131668448 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8648798 8648882 -131667883 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8648882 8649137 -131667628 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8649137 8649427 -131667338 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8649427 8649616 -131667149 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8649677 8649838 -131666927 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8650017 8650560 -131666205 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8651050 8651355 -131665410 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8651386 8651688 -131665077 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8651826 8651855 -131664910 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8652208 8652491 -131664274 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8653412 8653465 -131663300 + (TA)n Simple_repeat Simple_repeat 2 54 0 2272 100 0 3 chr10 8653529 8653829 -131662936 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8654200 8654229 -131662536 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8654357 8654426 -131662339 - L1P3 LINE L1 -5949 512 445 791 5 0 97 chr10 8655740 8655935 -131660830 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8655999 8656128 -131660637 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8656178 8656696 -131660069 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8656854 8656962 -131659803 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8656992 8657234 -131659531 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8657443 8657507 -131659258 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8657813 8658110 -131658655 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8658728 8658765 -131658000 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8658764 8658793 -131657972 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 296 306 42 119 chr10 8659431 8659833 -131656932 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8659849 8660157 -131656608 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8660165 8661400 -131655365 + L1PA12 LINE L1 4921 6161 -7 2573 52 7 0 chr10 8661801 8662106 -131654659 + AluY SINE Alu 1 307 -4 862 131 0 8 chr10 8662354 8662484 -131654281 + FLAM_C SINE Alu 1 129 -4 314 230 103 40 chr10 8662970 8663096 -131653669 + MIR SINE MIR 123 256 -6 1665 178 69 94 chr10 8663584 8663661 -131653104 - MLT1C LTR MaLR 0 467 390 1679 143 31 0 chr10 8663661 8663790 -131652975 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8663790 8663837 -131652928 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1679 143 31 0 chr10 8663837 8663965 -131652800 - AluSx SINE Alu -170 142 1 1665 178 69 94 chr10 8663965 8664366 -131652399 - MLT1C LTR MaLR -77 390 1 314 246 25 49 chr10 8664600 8664722 -131652043 - L2 LINE L2 -15 3298 3180 595 128 0 86 chr10 8664764 8664793 -131651972 + MLT1B LTR MaLR 81 111 -279 1872 156 0 47 chr10 8664793 8665114 -131651651 + AluSx SINE Alu 1 306 -6 595 128 0 86 chr10 8665114 8665201 -131651564 + MLT1B LTR MaLR 111 187 -203 685 69 11 0 chr10 8665209 8665296 -131651469 + AluY SINE Alu 205 292 -19 992 188 15 10 chr10 8665313 8665510 -131651255 + MLT1B LTR MaLR 188 385 -5 372 216 98 10 chr10 8665514 8665616 -131651149 + MER58B DNA MER1_type 186 296 -45 2124 137 10 0 chr10 8665708 8666014 -131650751 - AluY SINE Alu -2 309 1 420 304 96 26 chr10 8666102 8666332 -131650433 - MIR SINE MIR -14 248 3 3683 153 13 38 chr10 8666408 8667088 -131649677 - L1MA9 LINE L1 -146 6166 5504 311 287 128 0 chr10 8667164 8667258 -131649507 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8667641 8667672 -131649093 + AT_rich Low_complexity Low_complexity 1 31 0 1997 116 13 16 chr10 8667687 8667997 -131648768 - L1PA14 LINE L1 -17 6144 5836 951 162 0 0 chr10 8668711 8668853 -131647912 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8670273 8670324 -131646441 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8670330 8670359 -131646406 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1940 139 0 17 chr10 8670359 8670647 -131646118 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8672376 8672424 -131644341 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8672424 8672460 -131644305 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8672831 8672859 -131643906 + AT_rich Low_complexity Low_complexity 1 28 0 230 296 12 12 chr10 8672917 8672998 -131643767 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8673001 8673024 -131643741 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1914 156 0 0 chr10 8673576 8673851 -131642914 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8674364 8674446 -131642319 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8674460 8674629 -131642136 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8674641 8674799 -131641966 + (TA)n Simple_repeat Simple_repeat 2 166 0 247 279 85 0 chr10 8674847 8674976 -131641789 + L1MC4 LINE L1 7738 7877 -165 220 296 0 0 chr10 8674983 8675037 -131641728 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 863 119 0 0 chr10 8675257 8675399 -131641366 - FLAM_C SINE Alu 0 142 1 189 325 58 50 chr10 8675417 8675537 -131641228 - MIR SINE MIR -139 123 3 1888 149 141 8 chr10 8676619 8676995 -131639770 - MSTA LTR MaLR 0 428 3 186 279 108 31 chr10 8677137 8677266 -131639499 - L2 LINE L2 0 3313 3175 1147 279 142 33 chr10 8677340 8677490 -131639275 - L2 LINE L2 -8 3305 3173 2060 137 7 0 chr10 8677490 8677782 -131638983 + AluSx SINE Alu 8 301 -11 1147 279 142 33 chr10 8677782 8678528 -131638237 - L2 LINE L2 -140 3173 2322 1284 169 0 14 chr10 8678532 8678745 -131638020 + AluJo SINE Alu 1 210 -102 221 0 35 0 chr10 8678764 8678793 -131637972 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1992 265 199 42 chr10 8678816 8679479 -131637286 - L2 LINE L2 -988 2326 1768 2165 118 0 13 chr10 8679479 8679783 -131636982 - AluSx SINE Alu -12 300 1 1992 265 199 42 chr10 8679783 8680320 -131636445 - L2 LINE L2 -1546 1768 1316 2316 81 24 0 chr10 8680320 8680616 -131636149 - AluSp SINE Alu -10 303 1 1785 181 0 16 chr10 8680616 8680930 -131635835 - AluJo SINE Alu -3 309 1 1992 265 199 42 chr10 8680930 8681046 -131635719 - L2 LINE L2 -1997 1317 802 315 0 0 0 chr10 8683519 8683554 -131633211 + (CA)n Simple_repeat Simple_repeat 2 36 0 2335 101 0 3 chr10 8684756 8684778 -131631987 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8684778 8684816 -131631949 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2335 101 0 3 chr10 8684816 8685101 -131631664 - AluY SINE Alu -25 286 1 1392 187 90 14 chr10 8685106 8685384 -131631381 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8685685 8685710 -131631055 + (A)n Simple_repeat Simple_repeat 1 25 0 347 122 0 0 chr10 8685922 8685971 -131630794 - L1PA13 LINE L1 -293 5870 5822 345 343 88 15 chr10 8686878 8687082 -131629683 - MIR SINE MIR -32 230 12 2004 138 0 0 chr10 8687350 8687625 -131629140 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8687630 8687653 -131629112 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 805 171 0 0 chr10 8688173 8688296 -131628469 + FLAM_C SINE Alu 1 123 -20 227 227 39 16 chr10 8688936 8689064 -131627701 + (TA)n Simple_repeat Simple_repeat 2 132 0 1748 173 146 3 chr10 8689477 8689846 -131626919 + MSTB LTR MaLR 1 422 -4 375 213 71 39 chr10 8689880 8690007 -131626758 - MIR SINE MIR -120 142 12 2321 114 0 0 chr10 8691038 8691346 -131625419 - AluSg SINE Alu -2 308 1 329 342 19 26 chr10 8691566 8691721 -131625044 + MIR3 SINE MIR 9 162 -46 1506 172 67 0 chr10 8693505 8693790 -131622975 - AluJo SINE Alu -8 304 1 354 98 0 0 chr10 8696289 8696340 -131620425 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1475 187 35 4 chr10 8696361 8696618 -131620147 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8696653 8696694 -131620071 + (A)n Simple_repeat Simple_repeat 1 41 0 604 269 91 10 chr10 8697468 8697676 -131619089 + MIR SINE MIR 6 230 -32 788 156 57 0 chr10 8697797 8697938 -131618827 - FRAM SINE Alu 0 40 1 579 115 0 0 chr10 8697938 8698014 -131618751 - AluJ/FLAM SINE Alu -234 78 3 2610 59 0 0 chr10 8699208 8699515 -131617250 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8699710 8699744 -131617021 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1966 167 0 3 chr10 8700686 8700997 -131615768 + AluSx SINE Alu 2 311 -1 1118 150 12 0 chr10 8700997 8701157 -131615608 + AluJb SINE Alu 135 296 -16 469 274 86 16 chr10 8701778 8701964 -131614801 - MIR SINE MIR -54 208 10 640 89 50 0 chr10 8703152 8703253 -131613512 + L1PA3 LINE L1 5909 6014 -141 1630 194 36 72 chr10 8703695 8703727 -131613038 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8703727 8703762 -131613003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1630 194 36 72 chr10 8703762 8703794 -131612971 - MLT2C1 LTR ERVL -40 357 325 2013 117 47 7 chr10 8703794 8704092 -131612673 + AluSg SINE Alu 1 310 0 1630 194 36 72 chr10 8704092 8704417 -131612348 - MLT2C1 LTR ERVL -72 325 13 216 167 37 19 chr10 8706146 8706200 -131610565 + CT-rich Low_complexity Low_complexity 3 57 0 1619 182 7 39 chr10 8706596 8706903 -131609862 - AluJb SINE Alu -15 297 1 260 273 79 36 chr10 8709038 8709177 -131607588 + MIR SINE MIR 118 262 0 2222 121 3 3 chr10 8709524 8709831 -131606934 - AluSx SINE Alu -5 307 1 311 404 31 6 chr10 8710312 8710473 -131606292 + L2 LINE L2 3107 3271 -1 21 36 0 0 chr10 8712631 8712659 -131604106 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8713651 8713723 -131603042 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8713927 8713979 -131602786 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8714101 8714186 -131602579 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8714226 8714345 -131602420 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8714346 8714641 -131602124 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8715123 8715487 -131601278 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8715919 8716052 -131600713 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8716065 8716198 -131600567 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8716392 8716679 -131600086 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8717019 8717137 -131599628 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8717143 8717163 -131599602 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8717163 8717657 -131599108 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8717657 8717691 -131599074 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8718679 8718989 -131597776 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8719237 8719460 -131597305 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8719460 8719752 -131597013 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8719752 8719939 -131596826 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8720514 8720599 -131596166 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8720933 8721024 -131595741 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8721030 8721239 -131595526 - L1PA13 LINE L1 -44 6119 5904 2291 85 0 3 chr10 8721243 8721538 -131595227 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8721606 8721630 -131595135 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8722066 8722135 -131594630 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8722208 8722501 -131594264 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8722542 8722564 -131594201 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8722651 8722771 -131593994 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8723056 8723232 -131593533 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8723255 8723549 -131593216 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8723701 8723867 -131592898 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8723895 8724200 -131592565 - L2 LINE L2 -11 3261 2951 528 136 0 0 chr10 8725487 8725575 -131591190 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 252 178 76 119 chr10 8725636 8725754 -131591011 - MER103 DNA DNA -46 120 8 1704 153 7 27 chr10 8725905 8726199 -131590566 + AluJo SINE Alu 5 292 -20 748 294 5 23 chr10 8726207 8726425 -131590340 + MIR SINE MIR 28 241 -21 305 371 59 27 chr10 8726498 8726719 -131590046 - MIR SINE MIR -3 259 32 217 231 79 4 chr10 8726770 8726841 -131589924 - MIR SINE MIR -57 151 77 23 54 0 0 chr10 8727224 8727261 -131589504 + AT_rich Low_complexity Low_complexity 1 37 0 2054 96 64 0 chr10 8728834 8729116 -131587649 + AluSq SINE Alu 1 300 -13 243 88 0 0 chr10 8729483 8729517 -131587248 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8729964 8730086 -131586679 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8730086 8730391 -131586374 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8730391 8730925 -131585840 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8730926 8730966 -131585799 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8730966 8731364 -131585401 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8731364 8731703 -131585062 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8731741 8731802 -131584963 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8731810 8731821 -131584944 + (TTAA)n Simple_repeat Simple_repeat 3 13 -26 1861 161 0 20 chr10 8731821 8732125 -131584640 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8732125 8732136 -131584629 + (TTAA)n Simple_repeat Simple_repeat 13 23 -16 2423 62 3 0 chr10 8732136 8732428 -131584337 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8732428 8732441 -131584324 + (TTAA)n Simple_repeat Simple_repeat 22 39 0 1622 232 139 24 chr10 8732451 8732985 -131583780 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8733022 8733301 -131583464 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8733302 8733720 -131583045 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8733720 8733843 -131582922 - L2 LINE L2 -1431 1883 1762 267 103 0 0 chr10 8734286 8734325 -131582440 + (TCCC)n Simple_repeat Simple_repeat 2 40 0 2059 141 7 0 chr10 8734346 8734650 -131582115 - AluSq SINE Alu -7 306 1 1833 154 3 7 chr10 8734971 8735284 -131581481 + AluSx SINE Alu 1 312 0 551 281 7 0 chr10 8735477 8735630 -131581135 + L1M4 LINE L1 5070 5223 -923 253 75 38 19 chr10 8736076 8736129 -131580636 + A-rich Low_complexity Low_complexity 2 55 0 2173 78 18 4 chr10 8736168 8736478 -131580287 + AluSq SINE Alu 2 315 0 248 259 42 105 chr10 8737197 8737340 -131579425 - L1ME1 LINE L1 -35 6131 5998 2158 235 74 10 chr10 8737347 8738066 -131578699 + L1ME1 LINE L1 5119 5885 -281 532 163 41 0 chr10 8738212 8738310 -131578455 - MLT1G LTR MaLR 0 590 489 249 108 0 0 chr10 8738374 8738411 -131578354 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 1421 193 0 53 chr10 8738411 8738712 -131578053 - AluJo SINE Alu -25 287 3 1238 268 66 70 chr10 8739175 8739750 -131577015 - MLT1G LTR MaLR -11 579 7 222 364 13 0 chr10 8739793 8739870 -131576895 + L2 LINE L2 2230 2307 -1007 36 77 0 0 chr10 8740349 8740427 -131576338 + AT_rich Low_complexity Low_complexity 1 78 0 856 157 8 0 chr10 8740444 8740578 -131576187 - AluJo SINE Alu -177 135 1 181 284 47 88 chr10 8740648 8740796 -131575969 + L2 LINE L2 2344 2485 -829 458 338 33 14 chr10 8740933 8741143 -131575622 + MIR SINE MIR 48 261 -1 2683 108 19 11 chr10 8742139 8742511 -131574254 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8742978 8742999 -131573766 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8743591 8743906 -131572859 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8744371 8744575 -131572190 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8744750 8745097 -131571668 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8745302 8745319 -131571446 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8745319 8745504 -131571261 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8745504 8745682 -131571083 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8746368 8746541 -131570224 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8746718 8747011 -131569754 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8747296 8747597 -131569168 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8747654 8747769 -131568996 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8748210 8748246 -131568519 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8748264 8748310 -131568455 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8748518 8748862 -131567903 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8748898 8749015 -131567750 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8749018 8749061 -131567704 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8749590 8749819 -131566946 - L1ME LINE L1 -335 5786 5530 433 218 171 47 chr10 8750214 8750384 -131566381 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8750465 8750596 -131566169 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8750629 8751026 -131565739 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8751075 8751355 -131565410 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8752088 8752451 -131564314 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8752468 8752793 -131563972 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8752982 8753111 -131563654 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8756767 8756802 -131559963 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8757049 8757615 -131559150 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8759953 8760061 -131556704 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8761017 8761308 -131555457 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8761411 8761836 -131554929 - MSTA LTR MaLR -9 419 1 197 294 20 0 chr10 8763824 8763875 -131552890 + MIR SINE MIR 93 144 -64 558 263 22 62 chr10 8763889 8764068 -131552697 - MER5B DNA MER1_type -6 172 1 603 248 0 13 chr10 8765319 8765472 -131551293 + MLT1C LTR MaLR 317 467 0 1776 156 16 41 chr10 8765646 8765966 -131550799 - AluJb SINE Alu 0 312 1 1161 163 8 145 chr10 8766845 8767245 -131549520 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8768146 8768236 -131548529 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8768312 8768688 -131548077 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8770029 8770054 -131546711 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8770085 8770312 -131546453 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8770851 8770874 -131545891 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8771449 8771578 -131545187 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8771578 8771751 -131545014 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8771781 8771846 -131544919 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8772262 8772540 -131544225 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8772609 8772748 -131544017 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8772847 8772945 -131543820 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8772969 8773317 -131543448 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8773540 8773749 -131543016 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8774188 8774559 -131542206 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8774783 8775039 -131541726 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8775088 8775114 -131541651 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8775234 8775568 -131541197 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8775926 8776016 -131540749 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8776348 8776644 -131540121 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8777534 8777571 -131539194 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8777881 8778175 -131538590 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8779131 8779239 -131537526 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8781577 8782143 -131534622 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8782383 8782427 -131534338 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8784602 8784902 -131531863 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8785023 8785052 -131531713 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8785102 8785532 -131531233 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8785532 8785990 -131530775 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8786224 8786481 -131530284 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8787078 8787205 -131529560 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8787234 8787601 -131529164 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8787672 8787832 -131528933 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8789442 8789577 -131527188 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8791192 8791314 -131525451 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8791331 8791372 -131525393 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8791393 8791746 -131525019 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8791746 8791787 -131524978 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8791787 8791907 -131524858 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8792689 8792916 -131523849 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8792916 8792972 -131523793 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8792972 8793196 -131523569 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8793229 8793256 -131523509 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8793364 8793431 -131523334 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8793453 8794504 -131522261 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8794504 8794537 -131522228 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8794537 8795910 -131520855 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8797636 8797822 -131518943 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8798020 8798212 -131518553 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8798472 8798850 -131517915 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8799026 8799453 -131517312 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8801705 8801915 -131514850 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8803124 8803269 -131513496 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8803698 8803761 -131513004 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8805365 8805538 -131511227 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8805693 8806007 -131510758 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8806339 8806362 -131510403 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8806807 8806910 -131509855 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8807134 8807603 -131509162 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8807821 8807909 -131508856 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8808012 8808034 -131508731 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8808033 8808097 -131508668 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8808827 8808881 -131507884 + (TA)n Simple_repeat Simple_repeat 2 56 0 324 233 11 22 chr10 8808889 8808979 -131507786 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8808982 8809076 -131507689 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8809087 8809215 -131507550 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8809877 8809930 -131506835 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8810538 8810623 -131506142 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8810623 8810995 -131505770 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8810995 8811141 -131505624 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8811275 8811449 -131505316 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8811521 8811682 -131505083 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8811721 8811798 -131504967 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8811897 8812115 -131504650 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8812551 8812794 -131503971 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8812906 8812941 -131503824 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8813057 8813351 -131503414 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8813796 8813968 -131502797 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8814054 8814207 -131502558 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8815409 8815710 -131501055 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8815969 8816250 -131500515 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8816299 8816329 -131500436 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8816477 8816771 -131499994 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8816817 8817098 -131499667 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8817102 8817129 -131499636 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8817157 8817378 -131499387 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8817406 8817750 -131499015 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8818428 8818457 -131498308 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8818481 8818524 -131498241 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8819837 8820144 -131496621 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8820584 8821023 -131495742 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8821023 8821283 -131495482 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8821283 8821409 -131495356 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8821898 8822070 -131494695 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8822739 8823056 -131493709 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8824567 8824620 -131492145 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8825431 8825658 -131491107 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8825797 8825988 -131490777 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8826006 8826083 -131490682 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8826083 8826372 -131490393 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8826440 8826614 -131490151 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8826703 8826901 -131489864 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8827872 8827925 -131488840 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8827930 8828179 -131488586 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8828317 8828347 -131488418 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8828891 8829148 -131487617 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8829149 8829257 -131487508 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8829265 8829559 -131487206 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8829560 8830266 -131486499 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8830482 8830573 -131486192 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8831442 8831584 -131485181 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8831636 8831946 -131484819 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8832131 8832388 -131484377 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8832960 8833021 -131483744 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8833035 8833217 -131483548 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8833225 8833316 -131483449 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8835430 8835489 -131481276 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8836336 8836629 -131480136 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8837065 8837086 -131479679 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8838730 8838768 -131477997 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8838946 8838993 -131477772 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8841479 8841517 -131475248 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8842518 8842625 -131474140 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8843314 8843698 -131473067 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8843698 8843720 -131473045 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8843720 8843990 -131472775 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8843990 8844026 -131472739 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8844022 8844333 -131472432 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8844618 8844897 -131471868 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8844898 8844942 -131471823 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8844957 8845261 -131471504 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8845715 8845833 -131470932 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8845830 8845913 -131470852 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8845913 8846279 -131470486 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8846279 8846303 -131470462 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8846693 8846715 -131470050 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8846721 8846818 -131469947 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8847487 8847814 -131468951 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8847814 8847863 -131468902 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8847949 8847974 -131468791 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8847978 8848285 -131468480 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8848935 8849372 -131467393 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8849576 8849970 -131466795 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8851447 8851768 -131464997 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8852103 8853125 -131463640 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8853125 8853413 -131463352 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8853413 8853589 -131463176 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8853591 8855072 -131461693 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8855071 8855233 -131461532 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8855275 8855427 -131461338 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8855471 8855492 -131461273 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8855502 8856061 -131460704 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8856064 8856368 -131460397 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8856368 8856644 -131460121 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8856644 8857279 -131459486 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8857375 8857548 -131459217 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8857601 8857645 -131459120 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8857712 8857806 -131458959 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8857806 8858175 -131458590 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8858175 8859281 -131457484 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8859551 8859577 -131457188 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8860048 8860206 -131456559 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8861660 8861964 -131454801 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8861982 8862104 -131454661 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8863710 8863920 -131452845 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8864757 8864952 -131451813 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8865208 8865258 -131451507 + GA-rich Low_complexity Low_complexity 2 51 0 266 305 23 69 chr10 8868525 8868656 -131448109 - MIR SINE MIR -73 189 65 2246 105 7 0 chr10 8869961 8870256 -131446509 - AluSx SINE Alu -15 297 1 407 325 48 48 chr10 8870315 8870503 -131446262 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8872183 8872225 -131444540 + AT_rich Low_complexity Low_complexity 1 42 0 2078 124 0 0 chr10 8872227 8872534 -131444231 + AluSx SINE Alu 1 307 0 345 296 21 21 chr10 8872534 8872676 -131444089 + MIR SINE MIR 121 262 0 749 250 44 44 chr10 8873269 8873517 -131443248 + MIR SINE MIR 14 261 -1 2258 124 0 0 chr10 8873725 8874031 -131442734 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8874591 8874650 -131442115 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2242 114 10 0 chr10 8875277 8875610 -131441155 - AluSc SINE Alu 0 336 1 1228 160 48 72 chr10 8875768 8876016 -131440749 + MER33 DNA MER1_type 2 242 -2343 3540 87 16 0 chr10 8876016 8876508 -131440257 - L1PA8 LINE L1 -13 6159 5660 1228 160 48 72 chr10 8876508 8876590 -131440175 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8876950 8876989 -131439776 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8877177 8877206 -131439559 + AT_rich Low_complexity Low_complexity 1 29 0 2165 142 0 0 chr10 8877206 8877501 -131439264 + AluSg SINE Alu 1 295 -15 739 200 0 0 chr10 8877515 8877635 -131439130 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8878659 8878681 -131438084 + AT_rich Low_complexity Low_complexity 1 22 0 263 331 65 48 chr10 8879148 8879272 -131437493 + MIR SINE MIR 20 145 -63 224 372 141 26 chr10 8879359 8879926 -131436839 - L2 LINE L2 -411 2903 2272 3146 173 28 11 chr10 8880018 8880664 -131436101 + L1MB8 LINE L1 5520 6176 -2 312 282 48 24 chr10 8880752 8880876 -131435889 + L1MEd LINE L1 2 128 -5991 602 318 125 24 chr10 8880995 8881458 -131435307 + L1MEd LINE L1 260 769 -5350 500 290 12 35 chr10 8881781 8881950 -131434815 + MIR SINE MIR 20 184 -78 294 316 95 6 chr10 8882061 8882219 -131434546 + LTR16A LTR ERVL 111 282 -168 1052 161 71 14 chr10 8883864 8884075 -131432690 + AluJb SINE Alu 90 312 0 239 271 43 0 chr10 8884807 8884877 -131431888 - MIR SINE MIR -188 74 2 641 263 75 42 chr10 8884945 8885158 -131431607 - MIR SINE MIR -33 229 10 187 304 0 0 chr10 8885177 8885223 -131431542 - L3 LINE CR1 -12 1565 1520 229 355 0 11 chr10 8885224 8885317 -131431448 - MIR SINE MIR -118 144 53 1761 148 4 11 chr10 8885536 8885813 -131430952 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8885818 8885978 -131430787 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8885978 8886017 -131430748 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 200 299 51 43 chr10 8887528 8887645 -131429120 - L2 LINE L2 -6 3307 3190 482 311 33 0 chr10 8888125 8888308 -131428457 + MER5A DNA MER1_type 1 189 0 2536 90 11 25 chr10 8888832 8889197 -131427568 - THE1B LTR MaLR -4 360 1 2183 154 16 102 chr10 8889255 8889755 -131427010 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8890986 8891009 -131425756 + AT_rich Low_complexity Low_complexity 1 23 0 1939 147 27 0 chr10 8892668 8892961 -131423804 - AluJb SINE Alu -11 301 1 205 358 63 21 chr10 8893240 8893335 -131423430 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8893352 8893476 -131423289 + (TA)n Simple_repeat Simple_repeat 1 123 0 26 88 0 0 chr10 8893873 8893941 -131422824 + AT_rich Low_complexity Low_complexity 1 68 0 809 181 0 0 chr10 8893968 8894101 -131422664 - FLAM_C SINE Alu 0 133 1 401 144 0 44 chr10 8894138 8894228 -131422537 + MER53 DNA DNA 102 187 -2 225 315 63 55 chr10 8894341 8894468 -131422297 - MIR SINE MIR -132 130 3 446 224 13 90 chr10 8894814 8894970 -131421795 - MIR SINE MIR -48 214 71 183 200 0 0 chr10 8895108 8895143 -131421622 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8895972 8896005 -131420760 + AT_rich Low_complexity Low_complexity 1 33 0 204 283 55 97 chr10 8898177 8898322 -131418443 + MIR SINE MIR 20 158 -50 561 133 80 44 chr10 8899506 8899619 -131417146 - FLAM_C SINE Alu -26 117 1 5005 138 25 7 chr10 8901068 8901913 -131414852 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8901913 8901953 -131414812 + (CA)n Simple_repeat Simple_repeat 2 41 0 5005 138 25 7 chr10 8901953 8902298 -131414467 + L1PB4 LINE L1 5811 6148 -8 252 317 64 94 chr10 8902699 8903027 -131413738 + L2 LINE L2 2874 3191 -81 633 216 26 0 chr10 8903230 8903346 -131413419 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8903545 8903567 -131413198 + AT_rich Low_complexity Low_complexity 1 22 0 279 228 127 111 chr10 8903609 8904043 -131412722 - HAL1b LINE L1 -37 1311 871 217 186 29 0 chr10 8904089 8904159 -131412606 + (TA)n Simple_repeat Simple_repeat 1 72 0 325 325 40 15 chr10 8904303 8904503 -131412262 - HAL1b LINE L1 -730 618 414 22 0 0 0 chr10 8905066 8905088 -131411677 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8905851 8905874 -131410891 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2026 101 11 14 chr10 8905876 8906152 -131410613 - AluSx SINE Alu -31 281 7 283 327 74 0 chr10 8906430 8906592 -131410173 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8907729 8907891 -131408874 + (TA)n Simple_repeat Simple_repeat 2 165 0 2108 110 6 0 chr10 8907891 8908219 -131408546 + L1P5 LINE L1 5419 5748 -408 561 158 0 0 chr10 8908245 8908346 -131408419 + (CA)n Simple_repeat Simple_repeat 2 102 0 1980 154 0 3 chr10 8910387 8910699 -131406066 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8911275 8911339 -131405426 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8911742 8911825 -131404940 - L2 LINE L2 -212 3060 2976 287 263 0 50 chr10 8911929 8912028 -131404737 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8912360 8912424 -131404341 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8913282 8913331 -131403434 + (CA)n Simple_repeat Simple_repeat 2 50 0 1949 144 18 0 chr10 8913351 8913628 -131403137 - AluSx SINE Alu -30 282 1 233 357 57 21 chr10 8913728 8913868 -131402897 - L2 LINE L2 -2 3311 3167 379 316 58 23 chr10 8914027 8914201 -131402564 - MIR SINE MIR -20 242 63 1325 192 106 32 chr10 8914369 8914738 -131402027 - MLT1F LTR MaLR -4 538 143 1884 123 75 34 chr10 8914762 8915120 -131401645 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8917442 8917603 -131399162 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8917664 8917699 -131399066 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8917744 8917780 -131398985 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8918732 8918976 -131397789 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8919004 8919197 -131397568 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8919197 8919303 -131397462 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8919304 8919398 -131397367 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8919968 8920000 -131396765 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8920286 8920326 -131396439 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8920394 8920629 -131396136 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8921074 8921099 -131395666 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8922429 8922804 -131393961 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8923380 8923510 -131393255 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8923513 8923684 -131393081 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8923684 8924149 -131392616 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8924992 8925027 -131391738 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8925027 8925168 -131391597 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8925291 8925328 -131391437 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8925328 8925460 -131391305 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8925754 8925803 -131390962 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8925831 8926093 -131390672 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8926093 8926125 -131390640 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8926125 8926484 -131390281 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8926566 8926646 -131390119 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8927324 8927417 -131389348 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8927927 8928110 -131388655 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8928110 8928246 -131388519 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8928263 8928514 -131388251 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8929039 8929071 -131387694 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8929077 8929170 -131387595 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8930865 8931033 -131385732 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8931113 8931162 -131385603 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8931205 8931351 -131385414 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8931351 8931858 -131384907 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8932921 8933229 -131383536 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8934112 8934419 -131382346 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8936006 8936083 -131380682 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8936140 8936333 -131380432 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8936504 8936797 -131379968 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8936797 8936894 -131379871 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8937045 8937088 -131379677 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8937920 8937941 -131378824 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8938015 8938396 -131378369 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8938989 8939055 -131377710 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8939450 8939646 -131377119 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8939661 8939785 -131376980 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8940210 8940717 -131376048 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8941723 8942025 -131374740 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8942309 8942355 -131374410 + AluJ/monomer SINE Alu 1 47 -254 2090 126 0 0 chr10 8942874 8943167 -131373598 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8943399 8943714 -131373051 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8945998 8946295 -131370470 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8946604 8946710 -131370055 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8946905 8947079 -131369686 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8947092 8947196 -131369569 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8947221 8947275 -131369490 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8947486 8947523 -131369242 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8947754 8947958 -131368807 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8949937 8949960 -131366805 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8950233 8950450 -131366315 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8950912 8951149 -131365616 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8951153 8951463 -131365302 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8951465 8951819 -131364946 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8951955 8952031 -131364734 - AluS SINE Alu -240 61 2 1509 193 3 0 chr10 8952031 8952347 -131364418 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8952411 8952721 -131364044 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8953947 8954183 -131362582 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8954478 8955111 -131361654 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8955100 8955305 -131361460 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8955659 8955832 -131360933 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8955841 8956756 -131360009 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8956756 8956811 -131359954 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8956812 8957108 -131359657 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8957108 8958125 -131358640 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8958179 8958204 -131358561 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8958228 8958464 -131358301 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8958475 8960321 -131356444 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8961286 8961405 -131355360 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8962517 8962566 -131354199 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8962727 8963041 -131353724 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8963041 8963134 -131353631 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8963239 8963516 -131353249 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8963517 8963582 -131353183 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8963584 8963872 -131352893 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8964218 8964239 -131352526 + AT_rich Low_complexity Low_complexity 1 21 0 2170 220 121 30 chr10 8965224 8965274 -131351491 - MLT1E1 LTR MaLR 0 654 610 2825 130 16 5 chr10 8965274 8965697 -131351068 + MSTA LTR MaLR 1 428 0 2170 220 121 30 chr10 8965697 8966253 -131350512 - MLT1E1 LTR MaLR -44 610 1 206 116 23 0 chr10 8968070 8968113 -131348652 + CT-rich Low_complexity Low_complexity 1 44 0 756 199 76 28 chr10 8968154 8968405 -131348360 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8968675 8968718 -131348047 + (TG)n Simple_repeat Simple_repeat 2 44 0 284 214 0 0 chr10 8969754 8969810 -131346955 + MER94 DNA DNA 75 130 -4 676 333 59 71 chr10 8969820 8970396 -131346369 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8970750 8971068 -131345697 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8971170 8971315 -131345450 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8971537 8972300 -131344465 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8972300 8973292 -131343473 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8973854 8974161 -131342604 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8974427 8974656 -131342109 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8974855 8974912 -131341853 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8975162 8975294 -131341471 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8975858 8976249 -131340516 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8976250 8976281 -131340484 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8976281 8976332 -131340433 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8976402 8976448 -131340317 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8976463 8976552 -131340213 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8976473 8976562 -131340203 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8976998 8977187 -131339578 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8977714 8977746 -131339019 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8978186 8978480 -131338285 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8978791 8978999 -131337766 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8979028 8979343 -131337422 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8979472 8979567 -131337198 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8980114 8980169 -131336596 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8983188 8983460 -131333305 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8983513 8983635 -131333130 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8983934 8984159 -131332606 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8984396 8984446 -131332319 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8985371 8985401 -131331364 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8985403 8985657 -131331108 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8986642 8986663 -131330102 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8986665 8986954 -131329811 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8987209 8987471 -131329294 - MER102a DNA MER1_type -19 311 43 21 36 0 0 chr10 8987956 8987984 -131328781 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8988810 8988842 -131327923 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8988854 8988940 -131327825 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8989631 8989861 -131326904 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8990042 8990342 -131326423 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8991533 8991572 -131325193 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8991572 8992235 -131324530 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8992235 8992651 -131324114 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8992897 8992921 -131323844 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8993013 8993093 -131323672 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8993307 8993514 -131323251 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8993563 8994198 -131322567 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8994207 8994255 -131322510 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8994255 8994735 -131322030 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8994735 8994999 -131321766 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8994973 8995109 -131321656 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8995083 8995443 -131321322 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8995420 8995613 -131321152 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8995639 8995667 -131321098 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8995797 8995967 -131320798 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8995970 8996132 -131320633 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8996945 8997602 -131319163 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8997645 8997684 -131319081 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8997706 8998016 -131318749 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8998020 8998040 -131318725 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8998051 8998161 -131318604 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8998178 8998355 -131318410 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8998714 8998829 -131317936 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8999345 8999412 -131317353 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8999865 9000023 -131316742 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 9000566 9000604 -131316161 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 9002925 9002948 -131313817 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 9004857 9004904 -131311861 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 9007303 9007357 -131309408 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 9007402 9007441 -131309324 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9007947 9008173 -131308592 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9010571 9010625 -131306140 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9012215 9012242 -131304523 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9012675 9012986 -131303779 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9013544 9013640 -131303125 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9013871 9013923 -131302842 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9013923 9014050 -131302715 - L1PA7 LINE L1 -18 6136 6010 702 346 115 40 chr10 9017793 9018516 -131298249 + L1MEd LINE L1 189 965 -5154 245 310 19 107 chr10 9018919 9019180 -131297585 + L1MEd LINE L1 488 725 -5394 1975 230 65 8 chr10 9019302 9019794 -131296971 - MLT2B1 LTR ERVL 0 520 1 435 300 39 58 chr10 9019881 9020546 -131296219 + L1MEd LINE L1 925 1616 -874 519 301 14 0 chr10 9020547 9020693 -131296072 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9020833 9021138 -131295627 + AluY SINE Alu 1 305 -6 324 270 111 11 chr10 9021139 9021328 -131295437 + L1ME3A LINE L1 5730 5937 -233 298 277 138 31 chr10 9021576 9021867 -131294898 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9023067 9023126 -131293639 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9023705 9023834 -131292931 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9023865 9023963 -131292802 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9024120 9024407 -131292358 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9024407 9024565 -131292200 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9025371 9025399 -131291366 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9025399 9025430 -131291335 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9025430 9025702 -131291063 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9025718 9025848 -131290917 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9025848 9026066 -131290699 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9026066 9026321 -131290444 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9026329 9027118 -131289647 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9027408 9027780 -131288985 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9027831 9028118 -131288647 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9028120 9028191 -131288574 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9028343 9028666 -131288099 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9028695 9028998 -131287767 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9029190 9029455 -131287310 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9029774 9030097 -131286668 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9030198 9030595 -131286170 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9030908 9031224 -131285541 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9033760 9034325 -131282440 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9035757 9035781 -131280984 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9036014 9036317 -131280448 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9036332 9036410 -131280355 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9036470 9036948 -131279817 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9036948 9037274 -131279491 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9037274 9037329 -131279436 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9037336 9037638 -131279127 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9037722 9037853 -131278912 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9037856 9037922 -131278843 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9038473 9039025 -131277740 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9039524 9039557 -131277208 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9039643 9039826 -131276939 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9039826 9039856 -131276909 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9040518 9040616 -131276149 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9040864 9041442 -131275323 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9042626 9043980 -131272785 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9044026 9044546 -131272219 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9044642 9045945 -131270820 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9045936 9046727 -131270038 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9047052 9047115 -131269650 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9047311 9047416 -131269349 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9047446 9047524 -131269241 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9047524 9047827 -131268938 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9047827 9048848 -131267917 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9050833 9050968 -131265797 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9051195 9051561 -131265204 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9052013 9052083 -131264682 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9052396 9052434 -131264331 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9052600 9052649 -131264116 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9052648 9052682 -131264083 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9053907 9054025 -131262740 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9054040 9054159 -131262606 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9054538 9054835 -131261930 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9055424 9055460 -131261305 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9056297 9056338 -131260427 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9056499 9056531 -131260234 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9058416 9058447 -131258318 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9059490 9059513 -131257252 + (TA)n Simple_repeat Simple_repeat 1 23 0 25 0 0 0 chr10 9059513 9059538 -131257227 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9060259 9060287 -131256478 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9060389 9060425 -131256340 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9061072 9061296 -131255469 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9061411 9061453 -131255312 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9061722 9061767 -131254998 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9062183 9062496 -131254269 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9062507 9062529 -131254236 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9062839 9062861 -131253904 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9064233 9064257 -131252508 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9064676 9064766 -131251999 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9065015 9065139 -131251626 - FLAM_A SINE Alu -10 123 1 227 347 0 14 chr10 9067667 9067739 -131249026 + MIR SINE MIR 78 148 -60 1606 191 3 27 chr10 9068248 9068546 -131248219 + AluJo SINE Alu 1 291 -21 349 223 45 36 chr10 9068572 9068684 -131248081 - MER112 DNA MER1_type -11 249 137 273 269 36 102 chr10 9069298 9069465 -131247300 + MIR SINE MIR 59 214 -48 2008 167 80 82 chr10 9070055 9070570 -131246195 - MLT2B1 LTR ERVL -1 519 6 391 83 0 0 chr10 9070741 9070801 -131245964 - L1MA3 LINE L1 -4 6301 6242 5088 60 0 6 chr10 9071263 9071915 -131244850 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9072418 9072721 -131244044 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9072763 9072794 -131243971 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9072795 9072998 -131243767 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9073913 9074091 -131242674 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9076318 9076955 -131239810 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9076966 9077515 -131239250 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9077683 9078564 -131238201 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9079283 9079528 -131237237 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9079528 9079553 -131237212 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9079769 9079809 -131236956 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9079916 9080246 -131236519 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9080326 9080539 -131236226 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9080571 9080593 -131236172 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9080828 9080898 -131235867 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9080909 9081170 -131235595 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9081656 9082055 -131234710 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9082460 9082819 -131233946 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9083376 9083435 -131233330 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9083689 9083726 -131233039 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9083779 9083863 -131232902 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9083943 9084379 -131232386 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9085869 9086176 -131230589 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9087588 9087895 -131228870 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9088173 9088396 -131228369 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9088798 9088892 -131227873 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9088898 9089007 -131227758 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9089096 9089243 -131227522 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9089338 9089434 -131227331 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9089721 9090299 -131226466 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9090967 9091149 -131225616 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9093765 9093801 -131222964 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9093806 9093970 -131222795 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9094527 9094591 -131222174 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9095514 9095554 -131221211 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9095785 9095879 -131220886 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9096419 9097828 -131218937 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9098226 9098390 -131218375 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9098758 9098788 -131217977 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9098869 9098909 -131217856 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9099122 9099169 -131217596 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9100404 9100443 -131216322 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9101229 9101338 -131215427 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9101450 9102909 -131213856 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9103057 9103918 -131212847 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9104241 9104479 -131212286 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9104521 9104696 -131212069 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9104681 9104742 -131212023 + MER41A LTR ERV1 403 464 -90 * 430 16 0 0 chr10 9105566 9105628 -131211137 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9107486 9107680 -131209085 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9108974 9109154 -131207611 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9112949 9113135 -131203630 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9114089 9114321 -131202444 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9115472 9115867 -131200898 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9116707 9116831 -131199934 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9116912 9116952 -131199813 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9117197 9117378 -131199387 + SVA Other Other 687 867 -519 6283 59 30 56 chr10 9117390 9118376 -131198389 + SVA Other Other 430 1390 0 236 304 43 0 chr10 9118950 9119019 -131197746 + MIR SINE MIR 31 102 -106 263 109 0 22 chr10 9119302 9119348 -131197417 - L1PA8 LINE L1 -12 6160 6116 2176 55 0 0 chr10 9119308 9119579 -131197186 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9119597 9119620 -131197145 + AT_rich Low_complexity Low_complexity 1 23 0 2378 102 6 0 chr10 9120481 9120823 -131195942 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9120942 9121004 -131195761 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9123439 9123495 -131193270 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9125326 9125366 -131191399 + (CA)n Simple_repeat Simple_repeat 1 40 0 984 268 32 52 chr10 9126555 9126958 -131189807 - MLT2C1 LTR ERVL -2 395 1 911 154 0 30 chr10 9127306 9127475 -131189290 + FRAM SINE Alu 1 164 -2 233 234 182 0 chr10 9127627 9127704 -131189061 - L1MA10 LINE L1 -8 6326 6236 2541 240 56 34 chr10 9127717 9129361 -131187404 - L1ME1 LINE L1 -117 6118 4443 1122 270 41 34 chr10 9129397 9129838 -131186927 + L1MCb LINE L1 1 444 -5601 776 267 49 4 chr10 9129837 9130084 -131186681 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9130447 9130482 -131186283 + AT_rich Low_complexity Low_complexity 1 35 0 206 407 47 0 chr10 9130504 9130590 -131186175 + L2 LINE L2 3140 3229 -43 2018 133 0 3 chr10 9130617 9130910 -131185855 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9132410 9132440 -131184325 + AT_rich Low_complexity Low_complexity 1 30 0 333 268 114 24 chr10 9132542 9132665 -131184100 - L2 LINE L2 -4 3309 3176 206 208 47 104 chr10 9132725 9132831 -131183934 - L2 LINE L2 0 3313 3214 778 234 38 28 chr10 9133043 9133260 -131183505 - MLT2B2 LTR ERVL 0 515 250 688 192 68 64 chr10 9133260 9133522 -131183243 + L1MC3 LINE L1 2335 2641 -3966 2037 122 3 7 chr10 9133522 9133818 -131182947 + AluSc SINE Alu 1 295 -14 688 192 68 64 chr10 9133818 9133913 -131182852 + L1MC3 LINE L1 2641 2734 -3873 186 118 0 0 chr10 9133921 9133955 -131182810 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1365 221 18 49 chr10 9133955 9134443 -131182322 + L1MC3 LINE L1 3074 3546 -2880 * 10090 212 41 37 chr10 9134432 9138508 -131178257 + L1MC3 LINE L1 3969 8057 -8 1670 124 4 4 chr10 9138900 9139142 -131177623 + AluSc SINE Alu 1 242 -67 2196 216 17 4 chr10 9139382 9139854 -131176911 - MER66A LTR ERV1 0 478 1 1799 139 33 0 chr10 9140925 9141198 -131175567 - AluSx SINE Alu -28 284 3 379 262 122 67 chr10 9142013 9142177 -131174588 - MLT1J2 LTR MaLR -240 210 38 371 403 35 30 chr10 9142554 9142785 -131173980 - MIR SINE MIR -21 241 10 283 243 14 29 chr10 9143116 9143186 -131173579 - L2 LINE L2 -1 3312 3244 1594 110 27 11 chr10 9143381 9143644 -131173121 - L1PA13 LINE L1 -4 6159 5893 280 243 57 0 chr10 9143983 9144053 -131172712 + MIR SINE MIR 56 129 -79 1386 111 9 18 chr10 9144507 9144732 -131172033 + L1PA10 LINE L1 5942 6164 -4 5085 135 11 7 chr10 9145224 9146052 -131170713 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9146180 9146208 -131170557 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2150 87 0 17 chr10 9148072 9148359 -131168406 - AluSg SINE Alu -28 282 1 489 279 16 0 chr10 9148360 9148482 -131168283 + MIR SINE MIR 63 186 -76 234 339 101 9 chr10 9148581 9148690 -131168075 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9149191 9149213 -131167552 + AT_rich Low_complexity Low_complexity 1 22 0 257 313 81 0 chr10 9149641 9149740 -131167025 + L2 LINE L2 3200 3306 -7 1797 222 76 40 chr10 9149888 9150053 -131166712 - L1MC4 LINE L1 -178 7864 7706 1687 170 0 42 chr10 9150053 9150359 -131166406 - AluJo SINE Alu -17 295 3 1797 222 76 40 chr10 9150359 9150770 -131165995 - L1MC4 LINE L1 -336 7706 7267 399 232 1 24 chr10 9150785 9150885 -131165880 - L1MC4 LINE L1 -720 7293 7183 45 62 0 0 chr10 9151202 9151282 -131165483 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9153328 9153357 -131163408 + AT_rich Low_complexity Low_complexity 1 29 0 3147 52 7 7 chr10 9154222 9154629 -131162136 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9154629 9154665 -131162100 + AT_rich Low_complexity Low_complexity 1 36 0 256 326 56 11 chr10 9155223 9155312 -131161453 - L2 LINE L2 0 3272 3180 226 326 81 0 chr10 9155435 9155521 -131161244 + L2 LINE L2 3220 3312 -1 1886 95 56 0 chr10 9156532 9156817 -131159948 + L1PA10 LINE L1 5863 6163 -5 279 324 0 0 chr10 9157461 9157529 -131159236 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9158364 9158399 -131158366 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9160327 9160350 -131156415 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9161347 9161394 -131155371 + AT_rich Low_complexity Low_complexity 1 47 0 1595 166 0 11 chr10 9161416 9161730 -131155035 - AluJb SINE Alu 0 327 17 991 164 36 41 chr10 9162396 9162615 -131154150 - AluJo SINE Alu -9 303 86 2266 233 34 12 chr10 9162774 9163370 -131153395 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9163384 9163412 -131153353 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2242 26 7 0 chr10 9163472 9163742 -131153023 - L1PA4 LINE L1 -3 6152 5881 857 236 107 23 chr10 9164373 9164921 -131151844 + L1MD2 LINE L1 5528 6161 -5 2910 156 20 0 chr10 9164943 9165444 -131151321 + L1PB4 LINE L1 5639 6149 -7 352 281 59 39 chr10 9165738 9165891 -131150874 - L2 LINE L2 0 3313 3158 1992 122 95 12 chr10 9166172 9166508 -131150257 + THE1B LTR MaLR 1 364 0 1413 186 80 0 chr10 9166560 9166848 -131149917 - AluJb SINE Alu 0 309 1 330 298 108 25 chr10 9166848 9167006 -131149759 + MIR SINE MIR 35 205 -57 311 222 32 0 chr10 9167573 9167636 -131149129 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9167742 9168000 -131148765 - L2 LINE L2 -5 3267 3014 1065 151 0 0 chr10 9168466 9168632 -131148133 - AluSg/x SINE Alu -2 310 145 2330 73 0 3 chr10 9168841 9169141 -131147624 - AluSc SINE Alu -9 300 2 497 237 21 156 chr10 9169376 9169659 -131147106 - MIR SINE MIR -2 260 16 194 269 118 32 chr10 9170866 9170959 -131145806 - MIR SINE MIR 0 262 162 238 318 15 0 chr10 9172121 9172187 -131144578 - L2 LINE L2 -1 3271 3205 2116 125 42 28 chr10 9172212 9172571 -131144194 - THE1B LTR MaLR 0 364 1 376 233 41 34 chr10 9172783 9173033 -131143732 + MLT1H1 LTR MaLR 120 376 -214 186 337 105 0 chr10 9173222 9173317 -131143448 + MIR SINE MIR 71 175 -87 870 184 38 160 chr10 9173363 9173463 -131143302 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9173463 9173803 -131142962 + L1MA2 LINE L1 5963 6304 0 870 184 38 160 chr10 9173803 9174071 -131142694 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9174177 9174829 -131141936 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9175029 9175287 -131141478 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9175926 9175997 -131140768 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9177621 9177665 -131139100 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9177857 9177927 -131138838 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9178156 9178662 -131138103 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9178662 9178968 -131137797 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9178968 9179243 -131137522 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9179243 9179557 -131137208 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9179557 9179733 -131137032 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9179737 9180058 -131136707 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9180900 9181391 -131135374 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9181752 9181839 -131134926 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9182106 9182527 -131134238 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9182533 9182836 -131133929 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9182853 9182959 -131133806 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9183520 9183695 -131133070 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9183708 9184014 -131132751 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9184060 9184111 -131132654 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9184111 9184433 -131132332 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9184433 9185822 -131130943 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9185839 9185953 -131130812 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9185986 9188166 -131128599 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9188166 9188868 -131127897 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9188868 9190009 -131126756 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9190009 9190238 -131126527 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9190265 9190542 -131126223 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9190551 9190661 -131126104 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9190679 9190768 -131125997 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9191234 9191294 -131125471 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9191330 9191460 -131125305 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9191798 9192026 -131124739 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9192192 9192220 -131124545 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9192619 9193191 -131123574 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9193645 9194252 -131122513 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9195758 9195874 -131120891 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9195933 9196572 -131120193 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9197808 9197831 -131118934 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9198952 9198977 -131117788 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9199006 9199143 -131117622 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9199143 9199407 -131117358 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9200198 9200442 -131116323 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9201843 9201879 -131114886 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9202680 9202709 -131114056 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9203008 9203203 -131113562 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9203203 9203499 -131113266 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9203499 9204079 -131112686 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9204297 9204342 -131112423 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9204556 9204603 -131112162 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9204978 9205087 -131111678 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9205539 9205953 -131110812 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9206528 9206687 -131110078 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9206790 9206915 -131109850 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9206915 9206966 -131109799 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9206966 9207122 -131109643 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9207181 9207426 -131109339 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9207490 9207542 -131109223 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9207703 9207830 -131108935 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9207913 9208250 -131108515 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9208496 9208596 -131108169 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9208615 9208877 -131107888 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9208873 9209049 -131107716 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9209083 9209469 -131107296 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9211194 9212219 -131104546 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9212225 9212247 -131104518 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9212465 9212636 -131104129 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9212683 9212946 -131103819 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9213254 9213374 -131103391 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9213971 9214687 -131102078 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9215051 9215072 -131101693 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9216771 9216985 -131099780 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9216992 9217030 -131099735 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9217041 9217140 -131099625 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9217221 9217285 -131099480 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9217285 9217654 -131099111 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9217654 9217822 -131098943 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9217838 9217945 -131098820 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9218405 9218660 -131098105 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9218669 9219051 -131097714 - L2 LINE L2 -693 2621 2236 632 325 43 9 chr10 9222028 9222259 -131094506 + MIR SINE MIR 24 262 0 2079 143 0 6 chr10 9222383 9222697 -131094068 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9222824 9222852 -131093913 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9222997 9223017 -131093748 + (TG)n Simple_repeat Simple_repeat 2 21 0 2089 138 0 0 chr10 9223364 9223655 -131093110 - AluSx SINE Alu -20 292 2 524 154 24 49 chr10 9223936 9224059 -131092706 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9224390 9224661 -131092104 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9224710 9224739 -131092026 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9225268 9225394 -131091371 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9225538 9225694 -131091071 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9226650 9226672 -131090093 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9228152 9228273 -131088492 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9228318 9228462 -131088303 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9229589 9229746 -131087019 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9230740 9230778 -131085987 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9230999 9231289 -131085476 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9232058 9232656 -131084109 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9232656 9233680 -131083085 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9233865 9234020 -131082745 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9234020 9234299 -131082466 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9234299 9234305 -131082460 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9236897 9236936 -131079829 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9237299 9237351 -131079414 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9237985 9238075 -131078690 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9238198 9238310 -131078455 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9239608 9239637 -131077128 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9240096 9240562 -131076203 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9240905 9240949 -131075816 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9241241 9241289 -131075476 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9241331 9241983 -131074782 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9241984 9242112 -131074653 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9242261 9242902 -131073863 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9243071 9243126 -131073639 - L1MC/D LINE L1 -514 5845 5790 2331 83 0 10 chr10 9243175 9243477 -131073288 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9245857 9245938 -131070827 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9246146 9246206 -131070559 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9246213 9246281 -131070484 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9246305 9246593 -131070172 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9246735 9247107 -131069658 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9248243 9248413 -131068352 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9248663 9248964 -131067801 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9249338 9249359 -131067406 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9249791 9250070 -131066695 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9250071 9250113 -131066652 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9250117 9250199 -131066566 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9250217 9250260 -131066505 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9250687 9251148 -131065617 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9251180 9251877 -131064888 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9251875 9253017 -131063748 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9253017 9253246 -131063519 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9253272 9253482 -131063283 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9253559 9253640 -131063125 + L1MD2 LINE L1 6246 6325 -34 405 0 0 0 chr10 9253994 9254039 -131062726 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9254135 9254424 -131062341 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9254438 9254478 -131062287 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9254626 9254685 -131062080 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9254698 9254739 -131062026 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9257917 9257940 -131058825 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9258458 9258582 -131058183 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9259002 9259037 -131057728 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9259227 9259358 -131057407 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9259562 9259595 -131057170 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9259594 9259635 -131057130 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9260843 9261153 -131055612 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9261834 9261867 -131054898 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9262481 9262511 -131054254 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9262894 9263072 -131053693 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9263770 9263825 -131052940 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9263917 9264004 -131052761 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9265264 9265285 -131051480 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9267011 9267039 -131049726 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9268598 9268711 -131048054 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9271272 9271307 -131045458 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9272264 9272291 -131044474 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9272532 9272567 -131044198 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9272567 9272605 -131044160 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9272605 9272632 -131044133 + AT_rich Low_complexity Low_complexity 1 27 0 453 307 52 52 chr10 9273399 9273611 -131043154 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9273931 9273959 -131042806 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9276502 9276867 -131039898 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9276899 9277092 -131039673 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9277127 9277149 -131039616 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9277173 9277250 -131039515 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9278041 9278108 -131038657 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9278315 9278546 -131038219 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9278574 9278695 -131038070 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9278841 9278886 -131037879 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9279355 9279511 -131037254 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9280852 9280893 -131035872 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9280969 9280989 -131035776 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9280991 9281107 -131035658 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9281757 9281804 -131034961 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9281881 9282180 -131034585 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9282192 9282734 -131034031 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9282737 9282939 -131033826 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9283029 9283773 -131032992 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9283773 9283813 -131032952 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9283813 9283938 -131032827 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9283954 9283986 -131032779 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9284024 9284340 -131032425 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9284340 9284869 -131031896 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9284869 9284899 -131031866 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9284899 9284924 -131031841 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9284924 9284960 -131031805 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9284960 9285657 -131031108 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9285649 9285877 -131030888 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9287070 9287132 -131029633 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9287291 9287364 -131029401 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9287407 9287640 -131029125 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9288486 9288885 -131027880 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9288883 9289339 -131027426 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9289392 9289649 -131027116 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9290946 9291323 -131025442 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9291853 9291940 -131024825 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9292604 9293248 -131023517 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9296035 9296112 -131020653 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9296351 9297697 -131019068 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9297697 9297993 -131018772 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9297993 9298491 -131018274 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9298617 9298638 -131018127 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9298668 9298981 -131017784 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9299169 9299241 -131017524 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9299241 9299735 -131017030 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9299735 9300033 -131016732 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9300057 9300286 -131016479 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9300853 9302727 -131014038 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9302835 9302857 -131013908 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9303089 9303548 -131013217 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9303662 9303820 -131012945 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9303946 9304245 -131012520 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9304245 9304737 -131012028 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9304737 9305207 -131011558 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9305241 9305264 -131011501 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9305280 9305925 -131010840 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9305926 9306384 -131010381 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9306383 9306453 -131010312 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9306562 9306670 -131010095 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9306756 9306791 -131009974 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9306803 9306999 -131009766 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9306996 9307057 -131009708 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9307053 9307344 -131009421 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9307344 9307387 -131009378 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9307387 9307683 -131009082 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9307683 9307705 -131009060 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9307705 9307944 -131008821 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9307942 9308117 -131008648 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9308117 9308345 -131008420 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9308424 9309275 -131007490 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9309275 9309478 -131007287 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9309631 9309944 -131006821 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9310074 9310088 -131006677 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9310088 9310538 -131006227 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9310538 9310870 -131005895 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9311117 9311231 -131005534 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9311362 9311483 -131005282 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9311575 9311610 -131005155 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9314172 9314224 -131002541 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9314816 9315108 -131001657 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9315141 9315322 -131001443 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9315507 9315623 -131001142 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9317173 9317314 -130999451 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9318082 9318224 -130998541 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9318336 9318596 -130998169 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9318616 9318820 -130997945 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9318825 9318900 -130997865 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9319074 9319147 -130997618 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9319168 9319464 -130997301 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9320447 9320747 -130996018 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9321321 9321354 -130995411 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9321627 9321666 -130995099 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9321667 9322630 -130994135 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9322606 9323156 -130993609 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9323191 9323285 -130993480 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9323542 9323572 -130993193 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9324037 9324128 -130992637 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9325364 9325404 -130991361 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9325808 9325845 -130990920 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9326095 9326134 -130990631 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9326261 9326374 -130990391 + (TA)n Simple_repeat Simple_repeat 1 117 0 237 192 24 48 chr10 9326385 9326510 -130990255 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9326751 9326781 -130989984 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9328335 9328560 -130988205 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9328578 9328744 -130988021 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9328744 9329655 -130987110 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9329655 9329861 -130986904 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9330013 9330264 -130986501 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9330370 9330544 -130986221 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9331227 9331361 -130985404 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9331520 9331815 -130984950 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9332963 9333272 -130983493 + AluJb SINE Alu 1 310 0 219 337 53 42 chr10 9334290 9334385 -130982380 - L2 LINE L2 -21 3251 3156 377 317 129 12 chr10 9334526 9334913 -130981852 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9334923 9335297 -130981468 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9335297 9335596 -130981169 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9335596 9335683 -130981082 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9335715 9335914 -130980851 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9335914 9336402 -130980363 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9336553 9336809 -130979956 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9337415 9337715 -130979050 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9337718 9337910 -130978855 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9338302 9338387 -130978378 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9338795 9340217 -130976548 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9340780 9340943 -130975822 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9341433 9341784 -130974981 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9341799 9341982 -130974783 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9342210 9342392 -130974373 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9343796 9343922 -130972843 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9344468 9344837 -130971928 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9344966 9345082 -130971683 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9345304 9345801 -130970964 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9346494 9346797 -130969968 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9346906 9347213 -130969552 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9347912 9348385 -130968380 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9348409 9348639 -130968126 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9349106 9349133 -130967632 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9350020 9350244 -130966521 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9350683 9350987 -130965778 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9351066 9351202 -130965563 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9351202 9351502 -130965263 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9351590 9351806 -130964959 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9352371 9352492 -130964273 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9352492 9352514 -130964251 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9352514 9352682 -130964083 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9353623 9353667 -130963098 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9356692 9356740 -130960025 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9357117 9357149 -130959616 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9357426 9357493 -130959272 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9357710 9357752 -130959013 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9358657 9358703 -130958062 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360105 9360215 -130956550 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9360215 9360491 -130956274 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9360492 9360539 -130956226 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360539 9360757 -130956008 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9361720 9361749 -130955016 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9361933 9362096 -130954669 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9364323 9364583 -130952182 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9364631 9364879 -130951886 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9365212 9365266 -130951499 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9365696 9365720 -130951045 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9365731 9366062 -130950703 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9366184 9366404 -130950361 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9366498 9366571 -130950194 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9367140 9367168 -130949597 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9367737 9368006 -130948759 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9368257 9368560 -130948205 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9368611 9368645 -130948120 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9368696 9368999 -130947766 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9369039 9369063 -130947702 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9369175 9369245 -130947520 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9369388 9369445 -130947320 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9369843 9369971 -130946794 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9370722 9370872 -130945893 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9371265 9371537 -130945228 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9371903 9371939 -130944826 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9371984 9372165 -130944600 + MIR SINE MIR 53 236 -26 1949 82 90 4 chr10 9372555 9372822 -130943943 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9372875 9373004 -130943761 + MIR3 SINE MIR 40 166 -42 2180 145 65 20 chr10 9373028 9373429 -130943336 + MSTB LTR MaLR 8 426 0 270 306 68 34 chr10 9373865 9374012 -130942753 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9375180 9375207 -130941558 + AT_rich Low_complexity Low_complexity 1 27 0 448 329 55 21 chr10 9375887 9376124 -130940641 - MIR SINE MIR -16 246 2 352 315 94 71 chr10 9376661 9376915 -130939850 + HAL1 LINE L1 56 315 -2192 641 248 59 101 chr10 9377305 9377946 -130938819 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9377947 9378065 -130938700 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9378065 9378189 -130938576 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9380457 9380527 -130936238 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9380801 9380879 -130935886 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9381027 9381323 -130935442 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9381382 9381576 -130935189 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9382612 9382645 -130934120 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9382646 9382960 -130933805 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9382964 9383061 -130933704 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9383392 9383656 -130933109 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9383768 9383823 -130932942 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9384670 9384970 -130931795 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9384994 9385023 -130931742 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9385421 9385495 -130931270 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9385662 9385898 -130930867 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9386419 9386473 -130930292 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9386786 9387016 -130929749 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9387121 9387523 -130929242 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9387701 9387844 -130928921 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9388147 9388388 -130928377 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9388388 9388439 -130928326 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9388439 9388616 -130928149 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9389211 9389305 -130927460 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9389305 9389600 -130927165 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9389600 9389611 -130927154 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9390341 9390451 -130926314 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9390481 9391339 -130925426 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9392552 9393075 -130923690 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9393555 9393884 -130922881 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9394218 9394394 -130922371 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9394435 9394682 -130922083 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9396393 9396553 -130920212 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9397741 9397780 -130918985 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9397852 9397885 -130918880 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9397889 9398908 -130917857 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9398908 9399213 -130917552 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9399213 9399484 -130917281 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9399573 9399825 -130916940 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9399863 9399937 -130916828 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9401771 9401843 -130914922 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9402327 9402351 -130914414 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9403957 9404158 -130912607 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9404764 9405091 -130911674 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9405634 9405785 -130910980 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9406031 9406163 -130910602 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9406426 9406480 -130910285 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9406624 9406649 -130910116 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9406649 9406957 -130909808 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9408219 9408474 -130908291 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9410349 9410538 -130906227 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9410559 9410752 -130906013 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9410869 9411284 -130905481 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9411284 9412915 -130903850 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9412926 9413338 -130903427 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9413501 9413615 -130903150 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9413924 9414132 -130902633 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9414743 9414763 -130902002 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9415953 9416009 -130900756 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9416121 9416646 -130900119 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9416929 9416981 -130899784 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9417103 9417407 -130899358 - L1MEd LINE L1 -5556 563 243 459 248 85 28 chr10 9417974 9418115 -130898650 + MLT1H1 LTR MaLR 403 551 -4 186 312 143 0 chr10 9418318 9418395 -130898370 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9418896 9418917 -130897848 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9419118 9419241 -130897524 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9420374 9420671 -130896094 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9420761 9420986 -130895779 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9421420 9421678 -130895087 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9422502 9422523 -130894242 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9423089 9423243 -130893522 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9423700 9424090 -130892675 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9424090 9424669 -130892096 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9424821 9424900 -130891865 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9426244 9426542 -130890223 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9427941 9428449 -130888316 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9428699 9428998 -130887767 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9431033 9431103 -130885662 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9433178 9433478 -130883287 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9433685 9434065 -130882700 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9434710 9436103 -130880662 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9436372 9436669 -130880096 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9436671 9436791 -130879974 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9438178 9438285 -130878480 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9439024 9439050 -130877715 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9440323 9440674 -130876091 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9440674 9441081 -130875684 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9441081 9441333 -130875432 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9441499 9441623 -130875142 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9441623 9444239 -130872526 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9444285 9444633 -130872132 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9444800 9444951 -130871814 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9444951 9444975 -130871790 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9444987 9445224 -130871541 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9445799 9446105 -130870660 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9447745 9447770 -130868995 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9448722 9449083 -130867682 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9449233 9449415 -130867350 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9451099 9451268 -130865497 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9451307 9451357 -130865408 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9453003 9453297 -130863468 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9454168 9454379 -130862386 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9454507 9454534 -130862231 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9455136 9455376 -130861389 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9455405 9455509 -130861256 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9456387 9456717 -130860048 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9456816 9456893 -130859872 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9458036 9458049 -130858716 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9458049 9458090 -130858675 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9459096 9459220 -130857545 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9459220 9459333 -130857432 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9460015 9460054 -130856711 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9461628 9461652 -130855113 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9462376 9462417 -130854348 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9462662 9462705 -130854060 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9463137 9463409 -130853356 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9464233 9464302 -130852463 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9465078 9465817 -130850948 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9465968 9466187 -130850578 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9466275 9466651 -130850114 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9466761 9466874 -130849891 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9466876 9467171 -130849594 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9467559 9467952 -130848813 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9468443 9468755 -130848010 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9469128 9469167 -130847598 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9469616 9469839 -130846926 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9470734 9470756 -130846009 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9472808 9473092 -130843673 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9473389 9473410 -130843355 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9473412 9473479 -130843286 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9473592 9474202 -130842563 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9474673 9474694 -130842071 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9475344 9475386 -130841379 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9475583 9475718 -130841047 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9476218 9476256 -130840509 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9476996 9477116 -130839649 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9477443 9477622 -130839143 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9478994 9479034 -130837731 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9480148 9480246 -130836519 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9486495 9486538 -130830227 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9487394 9487418 -130829347 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9487756 9487881 -130828884 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9488003 9488045 -130828720 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9488470 9488513 -130828252 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9489417 9489440 -130827325 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9489443 9489466 -130827299 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9491509 9491541 -130825224 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9492118 9492304 -130824461 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9493051 9493190 -130823575 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9493202 9493246 -130823519 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9493609 9493787 -130822978 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9493977 9494014 -130822751 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9494271 9494323 -130822442 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9494325 9494606 -130822159 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9496133 9497194 -130819571 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9497206 9497411 -130819354 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9497412 9497443 -130819322 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9497475 9497547 -130819218 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9497547 9497611 -130819154 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9497611 9497914 -130818851 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9497914 9498146 -130818619 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9498147 9498433 -130818332 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9498528 9499130 -130817635 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9499138 9499191 -130817574 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9499458 9499486 -130817279 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9499487 9499600 -130817165 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9499909 9501926 -130814839 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9501924 9502418 -130814347 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9502401 9502717 -130814048 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9503007 9503124 -130813641 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9503141 9503447 -130813318 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9503447 9503757 -130813008 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9503757 9503889 -130812876 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9504020 9504046 -130812719 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9506432 9506740 -130810025 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9506969 9506999 -130809766 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9507715 9507878 -130808887 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9507893 9508186 -130808579 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9509648 9509676 -130807089 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9510565 9510804 -130805961 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9511242 9511325 -130805440 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9511404 9511592 -130805173 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9511604 9511783 -130804982 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9511883 9512030 -130804735 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9512540 9512584 -130804181 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9515365 9515502 -130801263 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9516505 9516561 -130800204 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9517663 9517684 -130799081 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9519163 9519222 -130797543 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9519229 9519533 -130797232 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9519994 9520304 -130796461 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9520304 9520798 -130795967 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9521363 9521430 -130795335 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9522141 9522171 -130794594 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9522875 9523916 -130792849 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9523913 9523966 -130792799 + L1MA10 LINE L1 5786 5838 -496 * 191 61 30 0 chr10 9523971 9524004 -130792761 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9524008 9525432 -130791333 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9525432 9525612 -130791153 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9525717 9526068 -130790697 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9526068 9526363 -130790402 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9526363 9526511 -130790254 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9526816 9526837 -130789928 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9527419 9527648 -130789117 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9527936 9527956 -130788809 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9528191 9528228 -130788537 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9528229 9528515 -130788250 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9528845 9529038 -130787727 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9530138 9530197 -130786568 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 352 284 72 93 chr10 9530703 9530822 -130785943 - L1M4 LINE L1 -3187 2959 2839 2135 100 4 0 chr10 9530822 9531126 -130785639 + AluSx SINE Alu 13 317 0 352 284 72 93 chr10 9531126 9531434 -130785331 - L1M4 LINE L1 -3307 2839 2540 387 0 0 0 chr10 9531443 9531486 -130785279 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9531488 9531890 -130784875 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9532916 9532942 -130783823 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9534212 9534354 -130782411 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9534397 9534708 -130782057 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9535342 9535445 -130781320 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9537539 9537569 -130779196 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9537602 9537625 -130779140 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9538510 9538533 -130778232 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9538855 9538994 -130777771 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9539589 9539825 -130776940 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9539952 9540049 -130776716 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9540058 9540198 -130776567 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9540655 9540679 -130776086 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9541041 9541188 -130775577 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9541188 9541218 -130775547 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9541218 9541231 -130775534 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9541319 9541348 -130775417 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9541720 9541922 -130774843 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9543489 9543731 -130773034 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9543897 9543959 -130772806 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9543969 9544003 -130772762 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9544003 9544037 -130772728 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9544037 9544324 -130772441 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9544324 9544397 -130772368 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9544405 9544689 -130772076 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9544689 9544980 -130771785 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9544980 9545329 -130771436 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9545522 9545731 -130771034 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9546241 9546401 -130770364 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9547499 9547520 -130769245 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9548671 9548708 -130768057 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9550130 9550153 -130766612 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9550971 9551278 -130765487 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9551965 9552123 -130764642 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9552358 9552498 -130764267 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9552618 9552654 -130764111 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9554050 9554145 -130762620 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9554815 9554964 -130761801 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9555096 9555275 -130761490 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9555380 9555807 -130760958 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9556212 9556287 -130760478 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9556631 9556668 -130760097 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9557455 9558260 -130758505 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9558787 9558880 -130757885 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9561014 9561110 -130755655 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9561211 9561378 -130755387 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9561388 9561455 -130755310 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9562234 9562532 -130754233 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9563291 9563500 -130753265 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9565686 9565915 -130750850 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9566246 9566414 -130750351 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9566425 9566778 -130749987 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9567217 9567637 -130749128 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9568519 9568688 -130748077 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9569040 9569064 -130747701 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9569418 9569545 -130747220 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9569545 9569845 -130746920 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9569845 9570106 -130746659 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9570187 9570386 -130746379 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9570491 9570568 -130746197 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9570568 9570730 -130746035 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9570762 9570895 -130745870 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9570899 9571022 -130745743 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9572286 9572315 -130744450 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9572327 9572510 -130744255 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9572993 9573015 -130743750 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9574952 9575009 -130741756 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9575010 9575296 -130741469 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9575332 9575525 -130741240 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9576108 9576412 -130740353 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9577854 9578326 -130738439 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9578326 9578362 -130738403 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9578362 9578535 -130738230 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9579415 9579495 -130737270 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9579538 9579846 -130736919 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9580312 9580572 -130736193 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9580891 9581190 -130735575 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9581667 9582053 -130734712 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9582673 9582782 -130733983 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9583445 9583675 -130733090 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9583681 9584010 -130732755 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9584352 9584420 -130732345 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9584430 9584459 -130732306 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9584915 9585239 -130731526 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9585683 9585832 -130730933 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9585837 9586081 -130730684 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9586259 9586319 -130730446 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9586365 9586496 -130730269 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9586517 9586998 -130729767 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9587006 9587321 -130729444 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9587331 9587680 -130729085 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9587703 9588238 -130728527 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9588294 9588815 -130727950 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9589947 9590381 -130726384 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9590520 9590611 -130726154 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9590611 9590975 -130725790 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9590975 9591058 -130725707 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9591085 9591168 -130725597 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9591492 9591611 -130725154 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9591590 9591648 -130725117 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9592109 9592392 -130724373 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9592415 9592621 -130724144 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9593767 9593846 -130722919 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9595286 9595584 -130721181 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9595724 9596223 -130720542 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9596281 9596523 -130720242 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9596744 9597034 -130719731 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9597039 9599159 -130717606 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9599159 9599523 -130717242 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9599523 9600780 -130715985 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9600780 9601153 -130715612 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9601153 9601281 -130715484 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9601294 9601608 -130715157 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9601653 9601961 -130714804 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9601963 9602379 -130714386 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9603122 9603511 -130713254 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9604462 9604623 -130712142 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9604643 9604955 -130711810 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9604968 9605035 -130711730 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9605036 9605210 -130711555 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9605254 9605646 -130711119 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9605646 9605929 -130710836 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9605929 9606696 -130710069 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9607415 9607659 -130709106 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9607748 9608040 -130708725 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9608528 9608827 -130707938 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9609520 9609621 -130707144 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9610127 9610434 -130706331 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9610465 9610566 -130706199 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9610960 9611268 -130705497 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9611290 9611332 -130705433 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9611342 9611440 -130705325 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9611445 9611707 -130705058 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9612313 9612339 -130704426 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9612339 9612630 -130704135 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9614072 9614400 -130702365 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9615158 9615244 -130701521 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9615353 9615552 -130701213 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9615666 9615967 -130700798 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9616065 9616128 -130700637 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9616700 9616736 -130700029 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9616736 9617099 -130699666 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9617099 9617190 -130699575 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9617203 9617355 -130699410 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9617394 9617696 -130699069 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9618026 9618139 -130698626 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9618285 9618644 -130698121 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9618826 9619000 -130697765 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9619022 9619322 -130697443 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9619393 9619616 -130697149 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9620350 9621456 -130695309 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9621456 9621477 -130695288 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9621477 9622359 -130694406 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9622359 9622395 -130694370 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9622395 9623217 -130693548 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9623215 9624393 -130692372 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9624393 9624574 -130692191 - L1MC/D LINE L1 -2449 4091 3905 558 224 17 70 chr10 9624578 9624819 -130691946 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9624934 9625233 -130691532 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9625537 9625606 -130691159 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9625605 9625711 -130691054 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9625743 9625809 -130690956 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9625805 9625853 -130690912 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9625853 9625933 -130690832 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9625943 9626102 -130690663 + L1MA8 LINE L1 6130 6288 -3 4066 196 40 17 chr10 9626102 9626986 -130689779 + Cheshire DNA MER1_type 847 1750 -670 238 139 38 25 chr10 9678104 9678183 -130638582 + GA-rich Low_complexity Low_complexity 2 81 0 2211 114 3 3 chr10 9679623 9679922 -130636843 - AluSq SINE Alu -14 299 1 683 301 58 62 chr10 9680062 9680561 -130636204 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9680619 9680861 -130635904 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9681082 9681372 -130635393 - AluSx SINE Alu -10 302 1 3967 224 88 96 chr10 9681377 9683497 -130633268 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9683497 9683861 -130632904 + THE1B LTR MaLR 1 364 0 3967 224 88 96 chr10 9683861 9685118 -130631647 - L1MCa LINE L1 -4939 1487 263 2175 121 134 3 chr10 9685118 9685491 -130631274 - MSTA LTR MaLR -2 426 5 3967 224 88 96 chr10 9685491 9685619 -130631146 - L1MCa LINE L1 -6163 263 136 2189 127 3 10 chr10 9685636 9685950 -130630815 - AluSx SINE Alu 0 312 1 1072 175 13 35 chr10 9686260 9686488 -130630277 + AluSq SINE Alu 89 311 -2 732 317 101 29 chr10 9686490 9686906 -130629859 - LTR67 LTR ERVL -79 478 33 1511 216 44 49 chr10 9687651 9688040 -130628725 + MLT1B LTR MaLR 1 387 -3 199 346 111 43 chr10 9688052 9688376 -130628389 - L2 LINE L2 -1210 2104 1759 415 292 43 6 chr10 9688990 9689151 -130627614 - MER110A LTR ERV1 0 468 302 2382 72 7 3 chr10 9689171 9689478 -130627287 + AluY SINE Alu 1 308 -3 336 242 11 22 chr10 9689496 9689587 -130627178 - L1MC4 LINE L1 -1339 6703 6614 381 253 92 35 chr10 9689590 9689764 -130627001 + L1MB7 LINE L1 1706 1889 -4495 2295 218 82 55 chr10 9689808 9690200 -130626565 + L1MB7 LINE L1 5085 5465 -955 1765 170 14 3 chr10 9690200 9690483 -130626282 + AluJb SINE Alu 1 286 -26 2295 218 82 55 chr10 9690483 9691250 -130625515 + L1MB7 LINE L1 5465 6420 0 684 295 78 29 chr10 9691968 9692212 -130624553 + MIR SINE MIR 2 257 -5 2255 108 0 7 chr10 9692301 9692606 -130624159 + AluSg SINE Alu 1 303 -7 1984 127 43 0 chr10 9693094 9693393 -130623372 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9694087 9694188 -130622577 - L1MA6 LINE L1 -303 5997 5903 183 42 0 0 chr10 9694346 9694370 -130622395 + (A)n Simple_repeat Simple_repeat 1 24 0 1636 153 13 42 chr10 9694696 9695003 -130621762 + Tigger2a DNA MER2_type 2 299 -135 549 99 10 69 chr10 9695034 9695135 -130621630 - L1MA6 LINE L1 -303 5997 5903 2330 110 0 0 chr10 9695529 9695839 -130620926 + AluSg SINE Alu 1 310 0 183 333 0 0 chr10 9695862 9695904 -130620861 + MIR SINE MIR 23 64 -198 254 180 0 33 chr10 9695914 9695975 -130620790 - L1MC4 LINE L1 -1338 6704 6646 289 233 14 31 chr10 9696000 9696287 -130620478 + (TA)n Simple_repeat Simple_repeat 1 282 0 225 0 0 0 chr10 9696566 9696591 -130620174 + (T)n Simple_repeat Simple_repeat 1 25 0 180 77 0 0 chr10 9696892 9696918 -130619847 + (TC)n Simple_repeat Simple_repeat 1 26 0 2024 134 17 0 chr10 9696918 9697209 -130619556 - AluSx SINE Alu -8 304 9 1043 195 93 0 chr10 9698656 9698861 -130617904 + MER1B DNA MER1_type 1 224 -73 235 209 314 0 chr10 9699545 9699631 -130617134 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9699740 9699939 -130616826 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9700053 9700357 -130616408 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9700455 9700661 -130616104 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9700661 9700971 -130615794 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9700971 9701160 -130615605 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9701385 9701675 -130615090 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9702311 9702565 -130614200 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9702711 9702795 -130613970 + L1MC4 LINE L1 6609 6695 -1347 314 296 24 16 chr10 9703364 9703401 -130613364 + CT-rich Low_complexity Low_complexity 4 39 -90 2695 96 3 0 chr10 9703401 9703764 -130613001 + THE1B LTR MaLR 1 364 0 314 296 24 16 chr10 9703764 9703851 -130612914 + CT-rich Low_complexity Low_complexity 39 129 0 878 121 0 7 chr10 9703868 9704017 -130612748 + (TTC)n Simple_repeat Simple_repeat 2 149 0 2150 134 7 0 chr10 9704056 9704363 -130612402 + AluSx SINE Alu 1 309 -3 248 354 53 35 chr10 9704692 9704805 -130611960 - L2 LINE L2 -21 3251 3137 908 211 89 59 chr10 9705053 9705357 -130611408 - MLT1A2 LTR MaLR -61 313 1 869 218 17 6 chr10 9705539 9705713 -130611052 - MER5A DNA MER1_type -5 184 9 960 246 70 32 chr10 9705735 9706080 -130610685 + L1ME3A LINE L1 5805 6162 -8 186 386 31 81 chr10 9706106 9706329 -130610436 - L2 LINE L2 -11 3261 3050 2645 231 62 110 chr10 9707061 9708167 -130608598 - L1MC/D LINE L1 -743 5797 5002 207 0 0 0 chr10 9708167 9708190 -130608575 + (TG)n Simple_repeat Simple_repeat 2 24 0 2645 231 62 110 chr10 9708190 9709072 -130607693 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9709072 9709108 -130607657 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7146 23 0 0 chr10 9709108 9709930 -130606835 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9709928 9711106 -130605659 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9711106 9711287 -130605478 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9711291 9711532 -130605233 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9711647 9711946 -130604819 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9712250 9712319 -130604446 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9712318 9712424 -130604341 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9712456 9712522 -130604243 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9712518 9712566 -130604199 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9712566 9712646 -130604119 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9712656 9712815 -130603950 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9712815 9714266 -130602499 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9714961 9715080 -130601685 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9715100 9715852 -130600913 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9716073 9716152 -130600613 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9716341 9716387 -130600378 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9716409 9716683 -130600082 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9717430 9717924 -130598841 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9718541 9718611 -130598154 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9718611 9719162 -130597603 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9719162 9719339 -130597426 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9719655 9720325 -130596440 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9722627 9722647 -130594118 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9723026 9723375 -130593390 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9724030 9724106 -130592659 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9724107 9724276 -130592489 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9726044 9726135 -130590630 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9726332 9726486 -130590279 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9726521 9726806 -130589959 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9726806 9726941 -130589824 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9727035 9727131 -130589634 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9729521 9729699 -130587066 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9729775 9730069 -130586696 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9730163 9730857 -130585908 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9731069 9731132 -130585633 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9731609 9731888 -130584877 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9731929 9732236 -130584529 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9732488 9732857 -130583908 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9734142 9734287 -130582478 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9735020 9735114 -130581651 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9735611 9735763 -130581002 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9735841 9736719 -130580046 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9736719 9737030 -130579735 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9737030 9737320 -130579445 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9737505 9737653 -130579112 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9737930 9737976 -130578789 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9738799 9738825 -130577940 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9739005 9739252 -130577513 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9739355 9739483 -130577282 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9739565 9739708 -130577057 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9739711 9739785 -130576980 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9740194 9740253 -130576512 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9740253 9740318 -130576447 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9740342 9741012 -130575753 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9741012 9741038 -130575727 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9741038 9741335 -130575430 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9741597 9741846 -130574919 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9741854 9742216 -130574549 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9743513 9743539 -130573226 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9744029 9744170 -130572595 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9744359 9744653 -130572112 + AluJb SINE Alu 1 293 -19 277 313 55 25 chr10 9745928 9746091 -130570674 - HERVL LTR ERVL -3097 2557 2390 821 156 78 28 chr10 9746303 9746483 -130570282 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9746542 9748105 -130568660 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9748105 9748499 -130568266 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9748597 9748862 -130567903 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9749597 9749666 -130567099 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9749666 9752072 -130564693 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9752200 9752493 -130564272 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9752511 9753302 -130563463 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9755661 9755844 -130560921 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9756594 9756618 -130560147 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9756740 9757116 -130559649 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9757141 9757237 -130559528 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9757234 9757387 -130559378 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9757387 9757674 -130559091 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9757674 9758027 -130558738 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9758052 9758289 -130558476 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9758369 9758981 -130557784 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9758981 9759550 -130557215 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9759740 9760084 -130556681 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9760133 9760195 -130556570 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9760205 9760232 -130556533 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9760240 9760753 -130556012 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9761139 9761307 -130555458 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9761406 9761566 -130555199 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9761833 9761859 -130554906 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9762523 9762899 -130553866 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9762974 9763333 -130553432 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9764729 9764769 -130551996 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 588 179 0 0 chr10 9766058 9766181 -130550584 - L1MA4 LINE L1 -239 6061 5939 1118 154 21 17 chr10 9766186 9766419 -130550346 + L1MA4 LINE L1 6067 6300 0 2322 125 23 0 chr10 9766577 9766921 -130549844 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9767212 9767237 -130549528 + (TG)n Simple_repeat Simple_repeat 2 26 0 374 349 28 25 chr10 9769620 9769944 -130546821 - L1ME LINE L1 -372 5749 5425 477 252 40 89 chr10 9770533 9770894 -130545871 - MLT2C1 LTR ERVL -43 620 18 1156 164 65 104 chr10 9774186 9774571 -130542194 - LTR25 LTR ERV1 -10 784 415 274 197 136 0 chr10 9774539 9774605 -130542160 - MER51A LTR ERV1 -351 283 209 * 312 235 42 18 chr10 9774772 9774884 -130541881 - MER61E LTR ERV1 -484 85 1 831 239 110 0 chr10 9774964 9775299 -130541466 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9775434 9775480 -130541285 + (TG)n Simple_repeat Simple_repeat 2 47 0 244 271 0 0 chr10 9775538 9775597 -130541168 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9776042 9776233 -130540532 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9776293 9776317 -130540448 + AT_rich Low_complexity Low_complexity 1 24 0 397 282 92 14 chr10 9776483 9776625 -130540140 + L3 LINE CR1 677 829 -748 21 71 0 0 chr10 9777947 9777989 -130538776 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9778280 9778310 -130538455 + (A)n Simple_repeat Simple_repeat 1 30 0 2297 99 0 0 chr10 9778315 9778618 -130538147 + AluSc SINE Alu 1 303 -6 1112 201 68 95 chr10 9779186 9779619 -130537146 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9779619 9779653 -130537112 + (CA)n Simple_repeat Simple_repeat 1 34 0 1112 201 68 95 chr10 9779653 9779692 -130537073 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9780258 9780513 -130536252 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9782329 9782542 -130534223 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9782720 9784234 -130532531 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9784280 9784462 -130532303 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9784534 9784745 -130532020 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9784747 9784813 -130531952 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9784813 9785070 -130531695 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9785300 9785523 -130531242 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9785643 9785774 -130530991 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9786019 9786510 -130530255 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9787016 9787275 -130529490 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9787275 9787629 -130529136 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9787629 9787772 -130528993 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9787796 9787817 -130528948 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9787884 9788097 -130528668 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9788100 9788229 -130528536 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9788277 9788346 -130528419 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9788474 9789028 -130527737 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9789033 9789253 -130527512 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9790494 9790516 -130526249 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9791035 9791056 -130525709 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9791081 9792143 -130524622 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9792149 9792256 -130524509 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9792280 9792398 -130524367 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9792398 9792694 -130524071 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9792694 9792755 -130524010 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9793012 9793039 -130523726 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9794173 9794203 -130522562 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9794673 9795151 -130521614 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9795439 9795471 -130521294 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9795842 9795913 -130520852 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9796308 9796337 -130520428 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9796641 9796662 -130520103 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9797480 9797674 -130519091 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9797679 9797981 -130518784 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9798068 9799061 -130517704 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9799365 9799423 -130517342 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9799431 9799556 -130517209 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9799558 9800510 -130516255 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9800510 9801009 -130515756 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9801009 9801302 -130515463 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9801654 9801768 -130514997 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9801894 9801954 -130514811 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9801968 9801990 -130514775 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9801990 9802329 -130514436 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9802329 9802899 -130513866 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9802934 9803243 -130513522 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9803259 9803395 -130513370 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9803413 9805594 -130511171 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9805990 9806129 -130510636 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9806975 9807000 -130509765 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9808069 9808114 -130508651 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9810274 9810514 -130506251 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9810571 9811011 -130505754 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9811196 9811242 -130505523 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9811298 9811771 -130504994 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9811781 9812089 -130504676 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9812089 9812348 -130504417 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9812349 9812414 -130504351 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9812508 9812642 -130504123 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9812643 9812787 -130503978 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9813706 9813876 -130502889 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9813876 9814175 -130502590 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9814175 9814464 -130502301 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9814513 9814597 -130502168 - LTR33 LTR ERVL -10 511 426 2229 115 0 0 chr10 9816332 9816636 -130500129 + AluSx SINE Alu 2 305 -7 654 309 70 8 chr10 9817031 9817274 -130499491 - MLT1J LTR MaLR -210 301 44 8075 181 51 18 chr10 9817789 9818333 -130498432 + Tigger1 DNA MER2_type 1 526 -1892 1559 125 13 0 chr10 9818333 9818565 -130498200 + AluSg/x SINE Alu 67 301 -11 8075 181 51 18 chr10 9818565 9819702 -130497063 + Tigger1 DNA MER2_type 526 1737 -681 1877 72 4 0 chr10 9819702 9819939 -130496826 + L1P4 LINE L1 5443 5680 -488 8521 38 0 0 chr10 9820094 9821883 -130494882 - L1PA4 LINE L1 -1 6154 4351 3889 32 0 0 chr10 9821883 9822347 -130494418 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9822502 9822537 -130494228 + AT_rich Low_complexity Low_complexity 1 35 0 247 195 52 0 chr10 9822611 9822688 -130494077 + L1MC4 LINE L1 1478 1558 -5301 * 925 311 73 38 chr10 9822675 9823514 -130493251 + L1MC4 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9823513 9823728 -130493037 + L1P LINE L1 4745 4959 -1187 521 249 101 0 chr10 9823744 9823933 -130492832 + L1MC4 LINE L1 5473 5680 -1277 689 65 65 9 chr10 9824150 9824257 -130492508 + L1PA14 LINE L1 6044 6156 -5 266 212 15 0 chr10 9824270 9824336 -130492429 - Tigger1 DNA MER2_type -2351 67 1 2023 257 50 14 chr10 9824352 9824999 -130491766 + L1MC4 LINE L1 6107 6776 -2077 207 114 0 0 chr10 9825031 9825066 -130491699 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 497 268 146 7 chr10 9825083 9825370 -130491395 + L1MEc LINE L1 1914 2240 -4156 599 274 124 17 chr10 9825381 9825622 -130491143 + L1M4b LINE L1 18 284 -6575 316 277 11 119 chr10 9825746 9826006 -130490759 + L1M4b LINE L1 994 1225 -5634 1567 259 74 45 chr10 9826258 9826828 -130489937 + L1M4b LINE L1 2512 3064 -3893 1936 139 0 32 chr10 9826828 9827137 -130489628 + AluSx SINE Alu 1 299 -13 1567 259 74 45 chr10 9827137 9827786 -130488979 + L1M4b LINE L1 3064 3743 -3214 2056 116 0 0 chr10 9827787 9828064 -130488701 + AluSx SINE Alu 1 277 -35 825 340 49 29 chr10 9828190 9828643 -130488122 - LTR16B LTR ERVL 0 464 3 485 285 51 19 chr10 9828651 9828865 -130487900 - L1MEc LINE L1 -3549 2666 2446 2034 293 69 52 chr10 9828903 9829848 -130486917 - L1MEc LINE L1 -3976 2420 1493 192 77 0 0 chr10 9829848 9829874 -130486891 + (TG)n Simple_repeat Simple_repeat 2 27 0 2034 293 69 52 chr10 9829874 9831299 -130485466 - L1MEc LINE L1 -4903 1493 14 269 241 12 24 chr10 9831277 9831360 -130485405 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9831522 9831575 -130485190 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9833459 9833497 -130483268 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9834475 9834629 -130482136 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9835166 9835323 -130481442 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9835562 9835604 -130481161 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9835866 9835915 -130480850 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9836615 9836934 -130479831 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9837062 9837329 -130479436 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9837329 9837358 -130479407 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9837367 9837661 -130479104 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9837672 9837962 -130478803 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9837963 9838105 -130478660 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9838549 9838841 -130477924 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9839276 9839368 -130477397 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 225 211 0 0 chr10 9839522 9839574 -130477191 + (TA)n Simple_repeat Simple_repeat 2 53 0 236 281 49 0 chr10 9839584 9839666 -130477099 - L1MC4 LINE L1 -1343 6699 6614 219 298 0 0 chr10 9839683 9839767 -130476998 + (TA)n Simple_repeat Simple_repeat 1 84 0 274 388 39 0 chr10 9839828 9839931 -130476834 - MIR SINE MIR -83 125 19 189 0 0 0 chr10 9840245 9840266 -130476499 + (CA)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr10 9840976 9841008 -130475757 + (GA)n Simple_repeat Simple_repeat 1 32 0 2165 98 0 7 chr10 9841630 9841939 -130474826 + AluSg SINE Alu 1 310 0 2483 80 0 3 chr10 9842418 9842756 -130474009 - L1PA13 LINE L1 -250 5913 5577 1664 83 0 0 chr10 9842756 9842982 -130473783 + L1PA13 LINE L1 5920 6147 -16 361 19 57 0 chr10 9844088 9844141 -130472624 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2175 216 31 72 chr10 9845203 9845841 -130470924 - LTR9 LTR ERV1 0 612 1 2605 157 71 39 chr10 9846244 9846778 -130469987 - MER39 LTR ERV1 -2 705 155 2078 117 7 0 chr10 9847567 9847881 -130468884 + AluSx SINE Alu 1 312 0 437 224 93 100 chr10 9849549 9849758 -130467007 - MIR SINE MIR -9 253 42 612 101 0 0 chr10 9850276 9850365 -130466400 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 25 0 0 0 chr10 9850514 9850539 -130466226 + AT_rich Low_complexity Low_complexity 1 25 0 239 29 57 0 chr10 9850824 9850859 -130465906 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1919 109 7 4 chr10 9850868 9851142 -130465623 - AluSx SINE Alu -37 275 1 2205 78 0 3 chr10 9851673 9851975 -130464790 - AluSg SINE Alu 0 301 1 180 0 0 0 chr10 9853341 9853361 -130463404 + (TA)n Simple_repeat Simple_repeat 2 21 0 409 328 126 8 chr10 9853550 9853812 -130462953 + L1M4 LINE L1 4069 4361 -1785 304 267 97 48 chr10 9854073 9854238 -130462527 + L1M4 LINE L1 4492 4664 -1482 225 240 0 0 chr10 9854321 9854371 -130462394 + L1M4 LINE L1 4797 4846 -1300 272 317 94 15 chr10 9854396 9854737 -130462028 + L1M4 LINE L1 4903 5270 -876 30 45 0 0 chr10 9854755 9854799 -130461966 + AT_rich Low_complexity Low_complexity 1 44 0 437 332 85 5 chr10 9855635 9855858 -130460907 - L2 LINE L2 -637 2677 2437 472 155 29 0 chr10 9856000 9856103 -130460662 + GA-rich Low_complexity Low_complexity 1 106 0 256 116 0 23 chr10 9856110 9856153 -130460612 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 1482 183 27 83 chr10 9857101 9857209 -130459556 + MLT1B LTR MaLR 1 114 -276 196 29 29 29 chr10 9857209 9857243 -130459522 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2091 108 0 11 chr10 9857245 9857531 -130459234 - AluSx SINE Alu -29 283 1 1482 183 27 83 chr10 9857531 9857828 -130458937 + MLT1B LTR MaLR 115 386 -4 384 209 216 20 chr10 9858311 9858464 -130458301 - LTR41 LTR ERVL -590 183 1 2905 107 5 2 chr10 9858973 9859403 -130457362 - L1PB2 LINE L1 -2 6149 5719 2827 7 0 0 chr10 9859740 9860046 -130456719 - AluYb8 SINE Alu -12 306 1 44384 37 1 1 chr10 9860188 9866339 -130450426 + L1PA3 LINE L1 7 6152 -3 207 69 0 0 chr10 9866393 9866422 -130450343 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1937 121 37 4 chr10 9867915 9868217 -130448548 - AluY SINE Alu 0 313 3 205 283 121 50 chr10 9868676 9868775 -130447990 - L2 LINE L2 0 3313 3208 790 235 25 126 chr10 9868906 9869311 -130447454 - MLT1A1 LTR MaLR 0 365 2 310 255 83 45 chr10 9869908 9870065 -130446700 + MIR SINE MIR 95 257 -5 4823 160 14 6 chr10 9870102 9870981 -130445784 + L1PB4 LINE L1 5268 6153 -3 371 259 0 82 chr10 9871118 9871265 -130445500 - L2 LINE L2 0 3313 3179 184 91 45 0 chr10 9871452 9871496 -130445269 + A-rich Low_complexity Low_complexity 2 47 0 890 188 19 0 chr10 9871526 9871686 -130445079 + MER5A DNA MER1_type 3 165 -24 1950 140 42 50 chr10 9871859 9872237 -130444528 - THE1C LTR MaLR 0 375 1 1425 240 31 11 chr10 9872434 9872792 -130443973 + MLT1A1 LTR MaLR 1 365 0 243 0 0 0 chr10 9872860 9872887 -130443878 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 587 256 59 102 chr10 9873037 9873291 -130443474 - MLT1G LTR MaLR -334 256 14 324 318 46 59 chr10 9873334 9873573 -130443192 - MLT1G-int LTR MaLR -22 1349 1114 288 303 30 20 chr10 9874353 9874452 -130442313 - MLT1G-int LTR MaLR -879 492 393 571 138 121 0 chr10 9874883 9874999 -130441766 - AluJb SINE Alu 0 312 183 1603 166 0 0 chr10 9874999 9875246 -130441519 - AluSx SINE Alu -65 247 1 378 308 85 61 chr10 9875962 9876347 -130440418 + L2 LINE L2 2616 3004 -268 721 153 0 0 chr10 9876360 9876478 -130440287 + AluJb SINE Alu 190 307 -5 1060 219 32 19 chr10 9876483 9876922 -130439843 + L1M3 LINE L1 4959 5443 -737 * 3454 183 18 37 chr10 9876909 9877697 -130439068 - L1MB1 LINE L1 -146 6043 5271 489 315 82 7 chr10 9877943 9878089 -130438676 + MER91A DNA MER1_type 30 186 -10 1258 197 15 19 chr10 9878187 9878456 -130438309 - MER65A LTR ERV1 0 445 178 462 221 13 6 chr10 9878458 9878616 -130438149 + (TA)n Simple_repeat Simple_repeat 2 160 0 721 118 146 21 chr10 9878627 9878771 -130437994 - MER65B LTR ERV1 -369 162 1 4882 248 87 43 chr10 9878771 9880476 -130436289 - MER65B-int LTR ERV1 0 4871 3092 5844 74 4 4 chr10 9880482 9881251 -130435514 - L1PA8 LINE L1 -2 6170 5402 4199 82 11 0 chr10 9881243 9881866 -130434899 + L1P LINE L1 4798 5424 -730 * 1331 216 113 94 chr10 9881874 9883440 -130433325 - MER65A-int LTR ERV1 -1475 4856 3242 2069 107 4 0 chr10 9883440 9883744 -130433021 - AluSc SINE Alu 0 306 2 1331 216 113 94 chr10 9883744 9883840 -130432925 - MER65A-int LTR ERV1 -3089 3242 3149 385 225 62 73 chr10 9883836 9884014 -130432751 - MER65A-int LTR ERV1 -6399 1721 1546 * 22 0 0 0 chr10 9884075 9884097 -130432668 + AT_rich Low_complexity Low_complexity 1 22 0 7797 205 66 57 chr10 9884125 9884844 -130431921 - MER65A-int LTR ERV1 -2377 2494 1783 333 0 0 0 chr10 9884844 9884881 -130431884 + (CA)n Simple_repeat Simple_repeat 2 38 0 7797 205 66 57 chr10 9884881 9886579 -130430186 - MER65A-int LTR ERV1 -3088 1783 54 1986 212 28 21 chr10 9886639 9886901 -130429864 - MER65A LTR ERV1 -8 437 169 357 62 0 0 chr10 9886901 9886949 -130429816 + (TG)n Simple_repeat Simple_repeat 2 49 0 1986 212 28 21 chr10 9886949 9887120 -130429645 - MER65A LTR ERV1 -276 169 1 21 36 0 0 chr10 9889423 9889451 -130427314 + AT_rich Low_complexity Low_complexity 1 28 0 1774 176 36 6 chr10 9890235 9890570 -130426195 - L1MC1 LINE L1 -6 6327 5983 390 271 43 7 chr10 9890804 9890944 -130425821 + L1ME LINE L1 213 357 -6206 * 1607 283 90 41 chr10 9890942 9892207 -130424558 + L1MEc LINE L1 1119 2665 -3717 2283 96 0 31 chr10 9892207 9892530 -130424235 + AluSq SINE Alu 1 313 0 1607 283 90 41 chr10 9892530 9893309 -130423456 + L1MEc LINE L1 2665 3404 -2978 2257 70 0 3 chr10 9893317 9893603 -130423162 + AluY SINE Alu 1 285 -26 504 77 0 0 chr10 9893605 9893683 -130423082 + (ACATG)n Simple_repeat Simple_repeat 1 78 0 402 269 154 10 chr10 9893683 9893891 -130422874 + L1MEc LINE L1 3347 3584 -2798 730 267 82 41 chr10 9893953 9894365 -130422400 + L1M4 LINE L1 4518 4946 -1200 256 341 14 0 chr10 9894527 9894665 -130422100 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 2368 147 20 0 chr10 9894665 9895060 -130421705 - MER57A LTR ERV1 0 403 1 1174 123 9 66 chr10 9895175 9895386 -130421379 - AluSg/x SINE Alu -2 308 110 567 291 12 0 chr10 9895487 9895652 -130421113 + MIR SINE MIR 84 250 -12 345 279 66 22 chr10 9896058 9896194 -130420571 + MIR SINE MIR 118 259 -3 539 309 22 26 chr10 9898546 9898818 -130417947 + L1ME LINE L1 546 816 -5556 * 1032 306 82 48 chr10 9898808 9900152 -130416613 - L1M4 LINE L1 -1150 4996 3607 215 190 20 20 chr10 9900284 9900384 -130416381 + (TA)n Simple_repeat Simple_repeat 1 100 0 1727 202 11 22 chr10 9900420 9900787 -130415978 - MLT2D LTR ERVL -51 363 1 5209 142 33 5 chr10 9900918 9901797 -130414968 - L1PA16 LINE L1 -9 6157 5254 1885 224 37 35 chr10 9901812 9902351 -130414414 - L1 LINE L1 -1550 4596 4057 * 5044 223 24 9 chr10 9902338 9903599 -130413166 + L1 LINE L1 2975 4253 -1893 555 207 17 0 chr10 9903586 9903702 -130413063 + L1P LINE L1 3949 4066 -2080 * 329 314 111 49 chr10 9903767 9904343 -130412422 - HAL1b LINE L1 -505 843 232 26 30 0 0 chr10 9905359 9905392 -130411373 + AT_rich Low_complexity Low_complexity 1 33 0 303 373 8 15 chr10 9905552 9905611 -130411154 - L1MEc LINE L1 -4270 2126 2068 180 111 0 0 chr10 9905611 9905638 -130411127 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 373 8 15 chr10 9905638 9905712 -130411053 - L1MEc LINE L1 -4328 2068 1994 809 289 42 42 chr10 9905831 9906360 -130410405 - L1MEc LINE L1 -4438 1958 1430 456 351 46 28 chr10 9906897 9907222 -130409543 - L1MEc LINE L1 -6030 366 36 2119 175 117 44 chr10 9907243 9907635 -130409130 - MLT2B1 LTR ERVL 0 520 85 1654 169 3 44 chr10 9907635 9907954 -130408811 + AluSx SINE Alu 7 312 0 2119 175 117 44 chr10 9907954 9908041 -130408724 - MLT2B1 LTR ERVL -435 85 6 187 353 9 86 chr10 9908142 9908258 -130408507 - L2 LINE L2 -19 3253 3147 188 273 286 0 chr10 9908493 9908570 -130408195 + MIR SINE MIR 158 256 -6 1413 228 26 37 chr10 9909996 9910373 -130406392 + MLT2D LTR ERVL 1 373 -41 1003 198 100 55 chr10 9910647 9910976 -130405789 - MER2 DNA MER2_type 0 344 1 217 280 0 21 chr10 9912229 9912322 -130404443 + A-rich Low_complexity Low_complexity 5 95 0 1548 205 99 0 chr10 9913426 9913653 -130403112 - MLT1A1 LTR MaLR 0 365 93 1437 220 42 14 chr10 9913653 9914008 -130402757 + MLT1A1 LTR MaLR 1 365 0 1548 205 99 0 chr10 9914008 9914112 -130402653 - MLT1A1 LTR MaLR -272 93 1 579 286 93 20 chr10 9914871 9915094 -130401671 + L1ME3A LINE L1 5541 5746 -424 1666 187 10 7 chr10 9915094 9915388 -130401377 + AluJo SINE Alu 1 295 -17 579 286 93 20 chr10 9915388 9915562 -130401203 + L1ME3A LINE L1 5746 5967 -203 1808 180 3 0 chr10 9916751 9917051 -130399714 + AluJb SINE Alu 2 302 -10 13621 26 0 2 chr10 9917758 9919462 -130397303 - L1PA3 LINE L1 -680 5475 3775 6099 13 1 0 chr10 9919462 9920156 -130396609 + L1PA3 LINE L1 5459 6155 0 205 89 78 22 chr10 9920605 9920695 -130396070 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 415 325 32 4 chr10 9922349 9922598 -130394167 + L1MEc LINE L1 1229 1484 -4912 21 0 0 0 chr10 9922602 9922623 -130394142 + AT_rich Low_complexity Low_complexity 1 21 0 6973 64 4 2 chr10 9922623 9924308 -130392457 - L1PA7 LINE L1 -11 6143 4457 305 191 36 48 chr10 9924323 9924407 -130392358 - L1M4 LINE L1 -3951 2195 2113 938 117 0 0 chr10 9924417 9924545 -130392220 - AluSq/x SINE Alu -180 133 6 455 165 0 0 chr10 9924549 9924628 -130392137 - Tigger1 DNA MER2_type -503 1915 1837 6865 156 33 3 chr10 9924638 9925466 -130391299 - Tigger1 DNA MER2_type -1209 1209 333 213 39 0 0 chr10 9925466 9925492 -130391273 + (GA)n Simple_repeat Simple_repeat 1 26 0 6865 156 33 3 chr10 9925492 9925836 -130390929 - Tigger1 DNA MER2_type -2085 333 1 323 303 80 74 chr10 9926231 9926555 -130390210 - L1M4 LINE L1 -2329 3817 3492 1258 156 30 82 chr10 9926576 9926845 -130389920 - Tigger1 DNA MER2_type -1920 498 244 2112 238 57 52 chr10 9926933 9928628 -130388137 + L1ME1 LINE L1 114 2015 -4549 1703 225 20 6 chr10 9928630 9928985 -130387780 - MLT1A1 LTR MaLR -2 363 4 21 0 0 0 chr10 9928988 9929009 -130387756 + AT_rich Low_complexity Low_complexity 1 21 0 734 268 71 11 chr10 9929129 9929509 -130387256 + L1ME1 LINE L1 2191 2593 -3971 2053 100 7 0 chr10 9929511 9929782 -130386983 + AluSc SINE Alu 19 291 -18 349 281 123 79 chr10 9929808 9930263 -130386502 - HAL1 LINE L1 -1088 1419 945 1492 208 18 3 chr10 9930270 9930554 -130386211 - AluJb SINE Alu -24 288 1 2799 10 0 0 chr10 9930779 9931087 -130385678 + AluYa5 SINE Alu 1 308 -3 203 315 63 75 chr10 9932005 9932185 -130384580 - MIR SINE MIR -34 174 45 2185 164 55 26 chr10 9933692 9934112 -130382653 + Tigger2a DNA MER2_type 3 434 0 954 196 122 86 chr10 9934171 9934507 -130382258 + MLT1B LTR MaLR 43 390 0 2302 263 88 13 chr10 9934525 9936334 -130380431 + L1ME1 LINE L1 4640 6580 -4 189 74 0 0 chr10 9936340 9936367 -130380398 + (A)n Simple_repeat Simple_repeat 1 27 0 203 179 15 60 chr10 9936375 9936442 -130380323 + T-rich Low_complexity Low_complexity 3 66 0 932 339 102 28 chr10 9936469 9936760 -130380005 - L2 LINE L2 -54 3259 2991 1890 190 11 6 chr10 9936760 9937123 -130379642 + MLT1A1 LTR MaLR 1 365 0 932 339 102 28 chr10 9937123 9937586 -130379179 - L2 LINE L2 -322 2991 2425 2029 102 3 66 chr10 9938008 9938340 -130378425 + AluSp SINE Alu 1 311 -2 470 279 32 93 chr10 9940043 9940355 -130376410 + MLT1I LTR MaLR 99 391 -18 21 100 0 0 chr10 9940948 9941018 -130375747 + AT_rich Low_complexity Low_complexity 1 70 0 917 130 0 0 chr10 9941631 9941762 -130375003 - FLAM_C SINE Alu -2 131 1 327 336 37 30 chr10 9942001 9942135 -130374630 + MIR SINE MIR 17 151 -111 474 18 0 0 chr10 9942274 9942329 -130374436 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 236 302 0 0 chr10 9942398 9942484 -130374281 - L1MC4 LINE L1 -1342 6700 6615 294 106 0 0 chr10 9942484 9942531 -130374234 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 9942648 9942669 -130374096 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 9943577 9943608 -130373157 + AT_rich Low_complexity Low_complexity 1 31 0 1641 262 134 65 chr10 9945191 9946235 -130370530 + L1MC4a LINE L1 5520 6660 -1148 2502 74 0 0 chr10 9946235 9946546 -130370219 + AluY SINE Alu 1 311 0 1641 262 134 65 chr10 9946546 9946709 -130370056 + L1MC4a LINE L1 6660 6810 -998 834 198 0 0 chr10 9946714 9946891 -130369874 + GA-rich Low_complexity Low_complexity 1 177 0 424 273 148 53 chr10 9946903 9947431 -130369334 + L1MC4 LINE L1 6926 7503 -539 255 355 82 24 chr10 9947614 9947855 -130368910 - L2 LINE L2 -228 3085 2767 21 57 0 0 chr10 9948314 9948349 -130368416 + AT_rich Low_complexity Low_complexity 1 35 0 315 263 13 0 chr10 9950591 9950667 -130366098 + MLT1A2 LTR MaLR 254 330 -44 4135 142 32 17 chr10 9950677 9951861 -130364904 - Tigger1 DNA MER2_type -1117 1301 5 4603 233 33 38 chr10 9951993 9953522 -130363243 + L1MB7 LINE L1 3689 5225 -959 2733 16 0 10 chr10 9953522 9953834 -130362931 + AluYb8 SINE Alu 1 309 -9 4603 233 33 38 chr10 9953834 9954483 -130362282 + L1MB7 LINE L1 5225 5846 -338 2263 138 28 0 chr10 9954483 9954837 -130361928 + THE1B LTR MaLR 1 364 0 4603 233 33 38 chr10 9954837 9955164 -130361601 + L1MB7 LINE L1 5846 6173 -11 513 180 0 40 chr10 9955320 9955420 -130361345 + MLT1B LTR MaLR 3 98 -292 256 89 89 0 chr10 9955411 9955456 -130361309 - MADE1 DNA Mariner -31 49 1 * 2871 165 20 60 chr10 9955456 9955939 -130360826 + LTR9 LTR ERV1 1 455 -157 444 19 0 0 chr10 9955939 9955992 -130360773 + (TC)n Simple_repeat Simple_repeat 1 53 0 2871 165 20 60 chr10 9955992 9956145 -130360620 + LTR9 LTR ERV1 455 612 0 26 98 0 0 chr10 9956826 9956908 -130359857 + AT_rich Low_complexity Low_complexity 1 82 0 288 324 85 28 chr10 9957043 9957219 -130359546 - MIR SINE MIR -72 190 5 1828 170 0 0 chr10 9957560 9957872 -130358893 - AluJo SINE Alu 0 312 1 1871 204 68 70 chr10 9957962 9958517 -130358248 - MLT2B3 LTR ERVL 0 554 1 2845 167 22 18 chr10 9958620 9959170 -130357595 + MER39B LTR ERV1 102 653 0 310 296 44 30 chr10 9959170 9959305 -130357460 + L1M4 LINE L1 4905 5041 -1105 331 199 24 65 chr10 9959358 9959491 -130357274 + L1M4 LINE L1 5171 5295 -851 295 311 180 19 chr10 9959514 9959675 -130357090 + MIR SINE MIR 51 237 -25 391 349 48 4 chr10 9959729 9959958 -130356807 + L3 LINE CR1 1215 1453 -124 240 354 0 0 chr10 9960162 9960241 -130356524 + L3 LINE CR1 1489 1567 -10 1982 184 26 16 chr10 9962632 9963017 -130353748 - LTR45B LTR ERV1 -97 392 4 299 323 23 15 chr10 9964519 9964649 -130352116 - MLT1F1-int LTR MaLR -549 822 692 728 266 30 69 chr10 9964898 9965042 -130351723 - MLT1F1-int LTR MaLR -760 611 463 2136 97 4 0 chr10 9965042 9965360 -130351405 + AluSq SINE Alu 5 323 0 728 266 30 69 chr10 9965360 9965549 -130351216 - MLT1F1-int LTR MaLR -908 463 290 276 274 145 16 chr10 9965575 9965699 -130351066 - MLT1F1-int LTR MaLR -1229 142 3 533 306 55 74 chr10 9965727 9966060 -130350705 - MLT1F1 LTR MaLR -60 531 186 1860 151 3 3 chr10 9966060 9966411 -130350354 - AluSc SINE Alu 0 309 1 533 306 55 74 chr10 9966411 9966594 -130350171 - MLT1F1 LTR MaLR -405 186 1 646 309 13 91 chr10 9966599 9967149 -130349616 - L1ME3A LINE L1 -213 5957 5451 478 300 100 91 chr10 9967151 9967771 -130348994 - L2 LINE L2 -5 3308 2670 1216 350 131 36 chr10 9967777 9969476 -130347289 - L2 LINE L2 -1093 2221 363 1929 143 0 7 chr10 9969877 9970171 -130346594 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 9971824 9971846 -130344919 + AT_rich Low_complexity Low_complexity 1 22 0 409 341 15 0 chr10 9972370 9972505 -130344260 + MIR SINE MIR 12 148 -114 324 346 59 0 chr10 9972862 9972998 -130343767 - MLT2E LTR ERVL -453 175 32 1523 178 117 38 chr10 9973377 9973770 -130342995 - MSTC LTR MaLR -4 424 1 471 316 83 9 chr10 9974081 9974299 -130342466 + MIR SINE MIR 2 235 -27 747 160 73 0 chr10 9976077 9976227 -130340538 - L1MB3 LINE L1 -38 6145 5985 420 262 5 2 chr10 9976225 9976335 -130340430 - L1ME3A LINE L1 -758 5422 5311 * 50 71 0 0 chr10 9976485 9976584 -130340181 + AT_rich Low_complexity Low_complexity 1 99 0 249 264 27 9 chr10 9976708 9976818 -130339947 + L1M4 LINE L1 2903 3014 -3132 394 271 128 53 chr10 9976981 9977302 -130339463 + L1MCc LINE L1 91 435 -5988 1510 291 67 30 chr10 9977501 9978759 -130338006 + L1MCc LINE L1 798 2107 -4834 264 100 0 0 chr10 9978788 9978828 -130337937 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 348 62 25 chr10 9978841 9979194 -130337571 - L1MEc LINE L1 -5954 442 77 23 33 0 0 chr10 9979305 9979335 -130337430 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 9980171 9980207 -130336558 + AT_rich Low_complexity Low_complexity 1 36 0 246 336 64 36 chr10 9981630 9981740 -130335025 + L2 LINE L2 3155 3267 -5 462 61 0 0 chr10 9982642 9982708 -130334057 + (CA)n Simple_repeat Simple_repeat 2 67 0 1680 269 108 29 chr10 9982754 9983708 -130333057 - L1ME3A LINE L1 -1333 4813 3785 1158 231 141 104 chr10 9983708 9984197 -130332568 + MER39 LTR ERV1 8 682 -25 922 265 94 52 chr10 9984207 9985076 -130331689 - L1ME3A LINE L1 -2351 3795 2869 30 0 0 0 chr10 9985838 9985868 -130330897 + AT_rich Low_complexity Low_complexity 1 30 0 1558 206 7 0 chr10 9985926 9986236 -130330529 - AluSx SINE Alu 0 312 1 3914 221 43 39 chr10 9986443 9986928 -130329837 + L1MC3 LINE L1 5123 5604 -542 1705 156 46 38 chr10 9986928 9987300 -130329465 + THE1C LTR MaLR 1 375 0 3914 221 43 39 chr10 9987300 9987967 -130328798 + L1MC3 LINE L1 5604 5250 -896 675 156 0 0 chr10 9987967 9988089 -130328676 + L1PA15 LINE L1 6041 6162 -3 3914 221 43 39 chr10 9988089 9988244 -130328521 + L1MC3 LINE L1 5249 5402 -744 2763 201 100 50 chr10 9988233 9989110 -130327655 + L1MC3 LINE L1 6840 7760 -25 * 505 544 5 10 chr10 9989108 9989314 -130327451 + L1PA5 LINE L1 5950 6154 0 * 52 17 0 0 chr10 9989320 9989379 -130327386 + AT_rich Low_complexity Low_complexity 1 59 0 350 270 51 67 chr10 9989420 9989823 -130326942 - L1MCa LINE L1 -4779 1942 1347 386 248 263 28 chr10 9989864 9990187 -130326578 - L1MCa LINE L1 -5077 1453 1055 2005 126 84 18 chr10 9990194 9990527 -130326238 - THE1C LTR MaLR 0 375 21 333 47 0 0 chr10 9991133 9991176 -130325589 + (TG)n Simple_repeat Simple_repeat 1 43 0 357 149 0 0 chr10 9991176 9991243 -130325522 - MER41A LTR ERV1 -93 461 395 279 0 0 0 chr10 9992301 9992332 -130324433 + (CA)n Simple_repeat Simple_repeat 2 32 0 221 214 36 0 chr10 9992532 9992588 -130324177 - L2 LINE L2 -9 3304 3247 250 327 38 69 chr10 9993022 9993181 -130323584 - L2 LINE L2 -3 3269 3116 213 401 30 0 chr10 9993477 9993609 -130323156 - L2 LINE L2 -676 2638 2503 1189 192 62 32 chr10 9993882 9994238 -130322527 + MSTC LTR MaLR 26 428 0 26 0 0 0 chr10 9994611 9994637 -130322128 + AT_rich Low_complexity Low_complexity 1 26 0 1922 142 0 23 chr10 9995423 9995726 -130321039 + AluSx SINE Alu 1 296 -16 254 85 0 21 chr10 9995729 9995776 -130320989 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 2212 111 0 0 chr10 9996720 9997017 -130319748 + AluSc SINE Alu 2 298 -11 199 162 54 0 chr10 9997088 9997125 -130319640 + MIR SINE MIR 115 153 -109 1272 169 56 26 chr10 9997680 9997947 -130318818 + AluJo SINE Alu 21 295 -17 246 62 0 0 chr10 9997947 9997979 -130318786 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 295 103 0 chr10 9998438 9998516 -130318249 - MIR SINE MIR -70 138 53 591 323 42 5 chr10 9998738 9998955 -130317810 - MIR SINE MIR -4 258 34 1112 297 7 51 chr10 10000385 10000799 -130315966 - L1MCa LINE L1 -6126 414 19 316 346 70 25 chr10 10000878 10001121 -130315644 + L1ME LINE L1 5493 5746 -375 21 0 0 0 chr10 10001142 10001163 -130315602 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr10 10001241 10001313 -130315452 + AT_rich Low_complexity Low_complexity 1 72 0 305 345 9 0 chr10 10001444 10001554 -130315211 - HAL1 LINE L1 -812 1695 1585 296 143 18 0 chr10 10001691 10001747 -130315018 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2511 128 5 0 chr10 10003262 10003644 -130313121 - L1PA15 LINE L1 -1 6164 5781 1399 198 43 3 chr10 10003650 10003978 -130312787 + L1MC1 LINE L1 5993 6333 0 23 0 0 0 chr10 10004099 10004122 -130312643 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr10 10004732 10004755 -130312010 + (GA)n Simple_repeat Simple_repeat 2 24 0 309 358 49 7 chr10 10005253 10005538 -130311227 + L1M4 LINE L1 4757 5053 -1093 706 229 41 64 chr10 10005593 10005860 -130310905 - L1MEc LINE L1 -2099 4116 3856 8086 34 38 0 chr10 10005909 10006929 -130309836 + L1P LINE L1 2799 3857 -2289 2118 251 71 28 chr10 10006984 10007872 -130308893 - L1MEc LINE L1 -3919 2477 1552 206 326 11 21 chr10 10008598 10008693 -130308072 + GA-rich Low_complexity Low_complexity 1 94 0 1833 141 50 0 chr10 10009195 10009492 -130307273 + AluSx SINE Alu 1 312 0 34 0 0 0 chr10 10010677 10010711 -130306054 + AT_rich Low_complexity Low_complexity 1 34 0 1870 279 89 45 chr10 10010718 10011892 -130304873 - L1MEc LINE L1 -4839 1557 333 1523 205 70 63 chr10 10011906 10012394 -130304371 - MLT1D LTR MaLR -2 503 13 848 306 46 7 chr10 10012411 10012692 -130304073 - L1MEc LINE L1 -6077 319 28 263 239 62 31 chr10 10013708 10013886 -130302879 - L1M4 LINE L1 -395 5779 5594 383 279 88 42 chr10 10013899 10014148 -130302617 - L1M4 LINE L1 -683 5479 5219 493 295 78 34 chr10 10014201 10014614 -130302151 - L1ME2 LINE L1 -309 5855 5425 1213 286 39 30 chr10 10014632 10015322 -130301443 - L1ME2 LINE L1 -769 5377 4682 244 293 44 49 chr10 10016061 10016266 -130300499 + L1ME LINE L1 5526 5729 -392 27 73 0 0 chr10 10016446 10016501 -130300264 + AT_rich Low_complexity Low_complexity 1 55 0 1435 80 0 5 chr10 10016502 10016702 -130300063 - L1PA13 LINE L1 -7 6156 5958 3396 99 4 29 chr10 10016702 10017217 -130299548 + L1PA13 LINE L1 5440 5941 -222 547 277 7 0 chr10 10017277 10017418 -130299347 - L1ME LINE L1 -445 5719 5578 180 111 0 0 chr10 10017711 10017738 -130299027 + (TG)n Simple_repeat Simple_repeat 2 28 0 313 114 45 11 chr10 10018505 10018593 -130298172 + (TA)n Simple_repeat Simple_repeat 1 91 0 3875 245 52 11 chr10 10018668 10020142 -130296623 + L1M4 LINE L1 1 1540 -4495 390 312 87 74 chr10 10021744 10022285 -130294480 - L2 LINE L2 -836 2478 1931 281 352 31 8 chr10 10023383 10023511 -130293254 + L2 LINE L2 2826 2956 -358 23 0 0 0 chr10 10023530 10023553 -130293212 + AT_rich Low_complexity Low_complexity 1 23 0 2190 114 10 0 chr10 10024010 10024316 -130292449 + AluSx SINE Alu 4 312 0 2266 93 0 0 chr10 10024379 10024698 -130292067 + AluY SINE Alu 1 311 0 504 291 147 16 chr10 10025523 10025904 -130290861 - L1ME3A LINE L1 -208 5962 5539 242 248 74 27 chr10 10025886 10026035 -130290730 + L1M4 LINE L1 4266 4421 -1613 * 389 302 84 36 chr10 10026239 10026603 -130290162 - L1ME3A LINE L1 -755 5391 5000 554 278 114 31 chr10 10026722 10026934 -130289831 - L1ME3A LINE L1 -1302 4844 4651 2867 0 0 0 chr10 10026934 10027245 -130289520 - AluYa5 SINE Alu 0 311 1 554 278 114 31 chr10 10027245 10027478 -130289287 - L1ME3A LINE L1 -1495 4651 4362 203 170 21 0 chr10 10027580 10027627 -130289138 + CT-rich Low_complexity Low_complexity 1 48 0 290 299 106 18 chr10 10027627 10027901 -130288864 - L1ME3A LINE L1 -2576 3570 3273 368 285 101 67 chr10 10027923 10028190 -130288575 - HAL1 LINE L1 -876 1631 1356 754 293 96 77 chr10 10028627 10029173 -130287592 - L2 LINE L2 -2 3311 2748 1539 223 61 158 chr10 10029213 10030686 -130286079 + L1ME2 LINE L1 2919 4248 -1898 992 227 65 57 chr10 10030833 10030865 -130285900 + L1ME2 LINE L1 5728 5758 -406 1301 230 137 40 chr10 10030865 10031338 -130285427 + LTR40a LTR ERVL 1 519 0 992 227 65 57 chr10 10031338 10031716 -130285049 + L1ME2 LINE L1 5758 6144 -20 181 256 98 73 chr10 10033351 10033433 -130283332 + MER5B DNA MER1_type 57 140 -38 22 35 0 0 chr10 10033864 10033893 -130282872 + AT_rich Low_complexity Low_complexity 1 29 0 188 349 16 0 chr10 10034329 10034392 -130282373 + L2 LINE L2 2557 2620 -694 24 32 0 0 chr10 10035203 10035234 -130281531 + AT_rich Low_complexity Low_complexity 1 31 0 309 293 104 80 chr10 10035265 10035603 -130281162 + HERVL LTR ERVL 1204 1549 -4105 1726 200 113 39 chr10 10035825 10036286 -130280479 - MLT1D LTR MaLR -2 503 9 815 311 20 23 chr10 10036288 10036593 -130280172 + HERVL LTR ERVL 3393 3696 -2068 664 269 83 16 chr10 10036623 10036876 -130279889 + HERVL LTR ERVL 3750 4019 -1635 * 1464 328 54 33 chr10 10036862 10037828 -130278937 + HERVL LTR ERVL 4385 5370 -394 233 286 62 54 chr10 10038168 10038280 -130278485 + LTR50 LTR ERVL 25 137 -658 830 248 133 5 chr10 10038344 10038562 -130278203 - MLT1E LTR MaLR 0 593 348 472 240 17 117 chr10 10038585 10038708 -130278057 - MLT1E LTR MaLR -362 231 130 2310 100 3 0 chr10 10038708 10039019 -130277746 - AluSx SINE Alu 0 312 1 472 240 17 117 chr10 10039019 10039074 -130277691 - MLT1E LTR MaLR -463 130 71 2115 106 17 0 chr10 10039775 10040067 -130276698 + AluSx SINE Alu 1 297 -15 230 314 91 16 chr10 10040801 10040922 -130275843 - MLT2E LTR ERVL -425 203 74 221 276 0 0 chr10 10043242 10043300 -130273465 + (TA)n Simple_repeat Simple_repeat 1 58 0 1291 278 122 33 chr10 10043381 10043924 -130272841 + MLT1G1 LTR MaLR 3 593 -2 537 305 106 25 chr10 10043967 10044373 -130272392 - L1ME LINE L1 -349 6624 6186 21 36 0 0 chr10 10044791 10044819 -130271946 + AT_rich Low_complexity Low_complexity 1 28 0 3254 223 22 39 chr10 10044835 10045797 -130270968 - L1ME LINE L1 -1656 5301 4356 796 165 80 58 chr10 10045798 10045986 -130270779 + L1PB4 LINE L1 5952 6143 -13 1820 174 3 0 chr10 10045994 10046298 -130270467 - AluSx SINE Alu -5 307 3 406 259 153 22 chr10 10046313 10046634 -130270131 - L1ME LINE L1 -2579 4378 4016 466 308 118 39 chr10 10046692 10047098 -130269667 - L1ME LINE L1 -4136 3002 2565 228 163 0 0 chr10 10047402 10047445 -130269320 + (TG)n Simple_repeat Simple_repeat 2 44 0 34 42 0 0 chr10 10047445 10047493 -130269272 + AT_rich Low_complexity Low_complexity 1 48 0 685 259 110 69 chr10 10047505 10047895 -130268870 - L1ME LINE L1 -4608 2351 1946 66 35 0 0 chr10 10047900 10047987 -130268778 + AT_rich Low_complexity Low_complexity 1 87 0 331 231 30 45 chr10 10047994 10048128 -130268637 - L1ME LINE L1 -4946 1909 1778 617 146 22 26 chr10 10048143 10048366 -130268399 - L1ME LINE L1 -5252 1607 1346 * 942 246 106 38 chr10 10048363 10048627 -130268138 - L1ME LINE L1 -6222 637 356 222 143 0 0 chr10 10048797 10048846 -130267919 + (TG)n Simple_repeat Simple_repeat 2 50 0 229 282 203 42 chr10 10049014 10049255 -130267510 - L1MEd LINE L1 -5836 283 4 2492 100 5 24 chr10 10049544 10049915 -130266850 - THE1B LTR MaLR 0 364 1 10680 121 6 13 chr10 10049915 10051506 -130265259 - THE1B-int LTR MaLR 0 1580 1 2338 99 25 25 chr10 10051506 10051869 -130264896 - THE1B LTR MaLR 0 364 2 287 263 61 53 chr10 10053249 10053363 -130263402 + L2 LINE L2 2969 3083 -189 2465 63 0 0 chr10 10054851 10055150 -130261615 - AluY SINE Alu -12 299 1 30 27 0 0 chr10 10055152 10055189 -130261576 + AT_rich Low_complexity Low_complexity 1 37 0 193 161 0 36 chr10 10057179 10057235 -130259530 + GA-rich Low_complexity Low_complexity 3 56 0 241 234 117 32 chr10 10057741 10057835 -130258930 + HAL1b LINE L1 381 482 -866 23 0 0 0 chr10 10057838 10057861 -130258904 + AT_rich Low_complexity Low_complexity 1 23 0 250 350 34 0 chr10 10059039 10059156 -130257609 - L2 LINE L2 0 3313 3193 2135 278 178 43 chr10 10059211 10060429 -130256336 + L2 LINE L2 795 2177 -1137 1988 136 3 17 chr10 10061757 10062077 -130254688 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 10062135 10062163 -130254602 + AT_rich Low_complexity Low_complexity 1 28 0 1943 135 28 0 chr10 10062168 10062456 -130254309 + AluSx SINE Alu 1 296 -16 22 35 0 0 chr10 10062551 10062580 -130254185 + AT_rich Low_complexity Low_complexity 1 29 0 245 228 54 0 chr10 10062772 10062864 -130253901 + (TA)n Simple_repeat Simple_repeat 1 97 0 1088 228 26 111 chr10 10063319 10063771 -130252994 - MLT2D LTR ERVL 0 414 1 357 319 43 7 chr10 10063771 10063909 -130252856 + MIR3 SINE MIR 48 190 -18 281 299 10 0 chr10 10064546 10064643 -130252122 - Charlie7 DNA MER1_type 0 2612 2515 1752 255 63 17 chr10 10065027 10065564 -130251201 + L1MCa LINE L1 28 589 -5837 1771 156 43 18 chr10 10065566 10065894 -130250871 - MER44D DNA MER2_type -3 606 1 6874 225 80 27 chr10 10065898 10070069 -130246696 + L1MC2 LINE L1 513 4903 -1661 4476 194 27 17 chr10 10070073 10071050 -130245715 + L1MC2 LINE L1 5775 6760 -2 252 0 0 0 chr10 10071166 10071194 -130245571 + (CA)n Simple_repeat Simple_repeat 2 29 0 274 269 0 0 chr10 10071238 10071290 -130245475 + Tigger3(Golem) DNA MER2_type 2 53 -2976 * 1886 171 47 0 chr10 10071286 10071626 -130245139 + Tigger3(Golem) DNA MER2_type 2673 3028 -1 270 0 0 0 chr10 10071631 10071661 -130245104 + (TG)n Simple_repeat Simple_repeat 1 30 0 288 70 0 0 chr10 10071678 10071721 -130245044 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 1913 87 12 0 chr10 10071721 10071975 -130244790 - AluSp SINE Alu -27 286 30 1145 200 68 13 chr10 10071975 10072210 -130244555 - AluJb SINE Alu -64 248 1 213 301 126 10 chr10 10072210 10072313 -130244452 - MIR SINE MIR -79 183 69 801 213 100 12 chr10 10072811 10073060 -130243705 - L1M4 LINE L1 -2494 3652 3382 743 296 155 33 chr10 10073092 10073737 -130243028 - L1MCc LINE L1 -4888 1535 812 816 320 74 27 chr10 10073965 10074412 -130242353 - L1MCc LINE L1 -5937 486 19 459 0 0 0 chr10 10075395 10075446 -130241319 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 332 217 27 0 chr10 10076825 10077092 -130239673 + (TA)n Simple_repeat Simple_repeat 1 274 0 391 209 26 0 chr10 10077114 10077389 -130239376 + (TA)n Simple_repeat Simple_repeat 1 282 0 312 60 116 0 chr10 10077400 10077457 -130239308 + MLT2A2 LTR ERVL 400 453 0 2356 117 5 24 chr10 10078262 10078631 -130238134 - THE1B LTR MaLR 0 364 3 1738 184 0 0 chr10 10078775 10079074 -130237691 + AluSx SINE Alu 1 299 -13 1618 187 13 0 chr10 10079989 10080294 -130236471 - AluSg SINE Alu -1 309 1 220 307 40 27 chr10 10081249 10081324 -130235441 - MIR SINE MIR -34 228 153 232 217 36 12 chr10 10081404 10081487 -130235278 + L1MC4 LINE L1 6617 6701 -1341 536 278 106 8 chr10 10082490 10082745 -130234020 + L1M4 LINE L1 1803 2082 -5381 310 214 0 24 chr10 10082765 10082849 -130233916 + L1M4 LINE L1 2482 2563 -5004 463 289 17 30 chr10 10083157 10083392 -130233373 + L1ME2 LINE L1 2014 2245 -5310 31 26 0 0 chr10 10083392 10083430 -130233335 + AT_rich Low_complexity Low_complexity 1 38 0 496 296 73 46 chr10 10083430 10084272 -130232493 + L1ME2 LINE L1 2524 3419 -4146 302 273 52 47 chr10 10084304 10084536 -130232229 + L1ME2 LINE L1 3518 3710 -3855 944 262 124 2 chr10 10084641 10085099 -130231666 + L1ME2 LINE L1 3692 4205 -3360 316 250 34 0 chr10 10085103 10085191 -130231574 + L1ME2 LINE L1 4279 4369 -3196 2191 236 100 28 chr10 10085367 10086291 -130230474 + L1ME2 LINE L1 6572 7564 -19 31 44 0 0 chr10 10086542 10086587 -130230178 + AT_rich Low_complexity Low_complexity 1 45 0 360 64 0 0 chr10 10086992 10087039 -130229726 + (TG)n Simple_repeat Simple_repeat 2 48 0 214 376 20 10 chr10 10087059 10087160 -130229605 + MIR SINE MIR 151 252 -10 503 326 45 48 chr10 10088049 10088618 -130228147 - ERVL LTR ERVL -786 4353 3694 1571 343 40 50 chr10 10088700 10089814 -130226951 - ERVL LTR ERVL -1869 3895 2793 333 251 88 26 chr10 10089985 10090154 -130226611 + MER41B LTR ERV1 112 425 -210 929 309 81 72 chr10 10090368 10090807 -130225958 - ERVL LTR ERVL -2249 2747 2298 1823 175 7 7 chr10 10090807 10091116 -130225649 - AluSx SINE Alu -3 309 1 929 309 81 72 chr10 10091116 10091347 -130225418 - ERVL LTR ERVL -2698 2298 2071 1204 263 67 40 chr10 10091373 10091818 -130224947 - ERVL LTR ERVL -3615 1381 925 1338 176 113 60 chr10 10091981 10092351 -130224414 - MLT1B LTR MaLR 0 390 1 2065 128 7 0 chr10 10092866 10093162 -130223603 - AluSg SINE Alu -12 298 1 2192 193 29 2 chr10 10093389 10093798 -130222967 - MSTB LTR MaLR -2 424 5 394 333 45 35 chr10 10093892 10094180 -130222585 - LTR16B LTR ERVL -171 293 3 862 95 0 16 chr10 10094700 10094865 -130221900 - AluSg/x SINE Alu 0 351 189 219 276 143 78 chr10 10095739 10095956 -130220809 - MIR SINE MIR -12 250 20 25 65 0 0 chr10 10096734 10096780 -130219985 + AT_rich Low_complexity Low_complexity 1 46 0 283 345 0 9 chr10 10097212 10097322 -130219443 - MIR SINE MIR -123 139 31 288 53 0 0 chr10 10099495 10099533 -130217232 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 98 15 15 chr10 10100482 10100746 -130216019 + AluSg SINE Alu 39 302 -8 22 56 0 0 chr10 10100826 10100862 -130215903 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr10 10101113 10101138 -130215627 + (TG)n Simple_repeat Simple_repeat 1 25 0 2422 57 0 17 chr10 10101278 10101578 -130215187 - AluY SINE Alu -16 295 1 190 282 64 51 chr10 10101599 10101677 -130215088 + L2 LINE L2 1876 1954 -1360 201 352 119 19 chr10 10101758 10101917 -130214848 + MIR SINE MIR 26 200 -62 460 277 95 84 chr10 10101945 10102324 -130214441 - MLT1I LTR MaLR -13 396 14 243 0 0 0 chr10 10102966 10102993 -130213772 + (CA)n Simple_repeat Simple_repeat 2 28 0 219 114 0 0 chr10 10103047 10103082 -130213683 + (TA)n Simple_repeat Simple_repeat 1 35 0 1311 264 113 10 chr10 10103099 10103190 -130213575 + L1ME LINE L1 22 102 -6294 2267 102 0 0 chr10 10103190 10103484 -130213281 + AluSc SINE Alu 1 294 -15 1311 264 113 10 chr10 10103484 10103915 -130212850 + L1ME LINE L1 102 598 -5798 874 241 166 10 chr10 10103937 10104419 -130212346 + L1ME LINE L1 714 1270 -5126 413 284 53 42 chr10 10104489 10104794 -130211971 + L1M1 LINE L1 2664 3064 -4577 * 2257 248 106 32 chr10 10104793 10105588 -130211177 + L1M3a LINE L1 971 1706 -4676 1543 176 7 33 chr10 10105588 10105889 -130210876 - AluJo SINE Alu -8 304 12 2257 248 106 32 chr10 10105889 10106963 -130209802 + L1M3a LINE L1 1706 3061 -3321 541 267 37 42 chr10 10106961 10107178 -130209587 + L1ME LINE L1 1853 2068 -4328 * 883 174 6 23 chr10 10107341 10107513 -130209252 - AluSc SINE Alu -140 169 1 321 280 90 76 chr10 10107614 10107825 -130208940 + L1MC4a LINE L1 5689 5902 -1906 196 323 54 11 chr10 10108040 10108133 -130208632 - L2 LINE L2 -1456 1858 1762 2191 88 7 27 chr10 10108490 10108786 -130207979 - AluSg SINE Alu -20 290 1 407 198 23 23 chr10 10110209 10110386 -130206379 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 280 254 8 8 chr10 10110398 10110528 -130206237 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 21 36 0 0 chr10 10111489 10111517 -130205248 + AT_rich Low_complexity Low_complexity 1 28 0 2028 168 65 23 chr10 10111618 10111736 -130205029 - Tigger2 DNA MER2_type 0 2718 2606 2276 100 0 7 chr10 10111736 10112037 -130204728 - AluSx SINE Alu -13 299 1 2028 168 65 23 chr10 10112037 10112352 -130204413 - Tigger2 DNA MER2_type -112 2606 2267 493 118 0 0 chr10 10112336 10112404 -130204361 - Tigger2 DNA MER2_type -2649 69 2 * 2159 125 0 3 chr10 10112512 10112825 -130203940 - AluSx SINE Alu 0 312 1 252 384 58 15 chr10 10112827 10113096 -130203669 - L2 LINE L2 -240 3032 2751 4122 226 46 12 chr10 10113280 10114443 -130202322 - L1 LINE L1 -2626 3520 2318 217 182 15 15 chr10 10114548 10114614 -130202151 + (TA)n Simple_repeat Simple_repeat 2 67 0 2301 261 99 49 chr10 10114646 10114864 -130201901 + L1ME LINE L1 3520 3726 -2489 1789 155 28 3 chr10 10114864 10115154 -130201611 + AluSx SINE Alu 5 301 -11 2301 261 99 49 chr10 10115154 10115219 -130201546 + L1ME LINE L1 3726 3786 -2429 327 25 0 0 chr10 10115219 10115259 -130201506 + (CA)n Simple_repeat Simple_repeat 2 41 0 2301 261 99 49 chr10 10115259 10116339 -130200426 + L1ME LINE L1 3786 4952 -1263 429 274 57 0 chr10 10116338 10116462 -130200303 + L1ME LINE L1 5698 5828 -405 * 452 294 119 59 chr10 10116490 10116878 -130199887 + LTR16A LTR ERVL 16 426 -24 239 315 11 56 chr10 10117090 10117179 -130199586 + L2 LINE L2 3187 3271 -1 810 280 42 17 chr10 10117876 10118112 -130198653 - MIR SINE MIR -10 252 11 1588 259 92 47 chr10 10118428 10120545 -130196220 - L1MD3 LINE L1 -14 7981 5693 205 269 19 0 chr10 10121669 10121721 -130195044 + MIR SINE MIR 160 212 -50 816 226 111 17 chr10 10122352 10122586 -130194179 - MLT2B2 LTR ERVL 0 515 260 688 173 0 8 chr10 10122596 10122729 -130194036 - L1PA15-16 LINE L1 -3895 2954 2823 630 112 9 9 chr10 10122731 10122838 -130193927 + L1PA15 LINE L1 6056 6162 -3 588 271 39 55 chr10 10122838 10123093 -130193672 - MLT2B2 LTR ERVL -264 251 1 2036 161 55 3 chr10 10123168 10123548 -130193217 - MER57A LTR ERV1 0 403 4 284 361 103 30 chr10 10123630 10124104 -130192661 + L2 LINE L2 2804 3312 -1 1544 231 115 0 chr10 10125049 10125448 -130191317 - MLT2B1 LTR ERVL -75 445 1 542 313 19 30 chr10 10126043 10126311 -130190454 + LTR16A LTR ERVL 88 352 -98 237 316 26 26 chr10 10126518 10126635 -130190130 - MIR3 SINE MIR -53 155 39 299 320 10 19 chr10 10126749 10126852 -130189913 + MER5A DNA MER1_type 64 165 -24 1305 188 65 60 chr10 10126901 10127284 -130189481 - MLT1B LTR MaLR -1 389 5 25 0 0 0 chr10 10127685 10127710 -130189055 + AT_rich Low_complexity Low_complexity 1 25 0 1988 147 10 0 chr10 10130278 10130571 -130186194 - AluSx SINE Alu -15 297 2 284 388 71 41 chr10 10131082 10131520 -130185245 - L2 LINE L2 -15 3257 2807 361 231 29 10 chr10 10132074 10132178 -130184587 + L1M4 LINE L1 5698 5803 -375 750 222 23 56 chr10 10132519 10132822 -130183943 - L1MEc LINE L1 -3871 3694 3398 733 274 4 34 chr10 10132829 10133063 -130183702 - L1MEc LINE L1 -6153 1593 1367 261 0 0 0 chr10 10135856 10135885 -130180880 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 225 171 0 0 chr10 10136699 10136734 -130180031 - U2 snRNA snRNA -152 36 2 910 263 55 24 chr10 10138022 10138311 -130178454 - LTR16C LTR ERVL -8 483 186 263 250 0 0 chr10 10138523 10138579 -130178186 - MER2 DNA MER2_type 0 345 290 948 226 25 0 chr10 10138644 10138843 -130177922 - MER2 DNA MER2_type -140 205 2 261 337 94 54 chr10 10139451 10139932 -130176833 - ERVL LTR ERVL -1149 4615 4116 402 319 104 34 chr10 10140043 10140397 -130176368 - ERVL LTR ERVL -2125 3529 3151 472 329 67 69 chr10 10140485 10140947 -130175818 - ERVL LTR ERVL -1994 3002 2542 794 304 40 33 chr10 10141054 10141482 -130175283 - L1MC/D LINE L1 -2115 5693 5263 25 31 0 0 chr10 10141542 10141574 -130175191 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr10 10141777 10141810 -130174955 + AT_rich Low_complexity Low_complexity 1 33 0 1548 189 25 0 chr10 10141899 10142174 -130174591 - AluJo SINE Alu -30 282 1 799 171 21 47 chr10 10142305 10142498 -130174267 - L1MB1 LINE L1 -226 5963 5776 1338 173 26 61 chr10 10142548 10142861 -130173904 + L1M3 LINE L1 5489 5790 -544 483 322 24 10 chr10 10142893 10143101 -130173664 + MER58C DNA MER1_type 5 215 0 775 291 25 30 chr10 10143618 10144093 -130172672 - MLT2F LTR ERVL -158 505 5 1371 311 23 33 chr10 10144418 10144599 -130172166 - ERVL LTR ERVL -348 5416 5235 2324 102 0 0 chr10 10144599 10144893 -130171872 + AluSg SINE Alu 1 294 -16 1371 311 23 33 chr10 10144893 10145610 -130171155 - ERVL LTR ERVL -529 5235 4456 203 0 0 36 chr10 10146248 10146276 -130170489 + (CA)n Simple_repeat Simple_repeat 2 28 0 186 133 0 0 chr10 10146380 10146410 -130170355 + (CATA)n Simple_repeat Simple_repeat 4 33 0 285 146 0 0 chr10 10146423 10146471 -130170294 + (TG)n Simple_repeat Simple_repeat 1 48 0 5510 134 7 18 chr10 10147120 10148723 -130168042 - L1PA15 LINE L1 -2 6163 4557 4557 224 13 5 chr10 10148735 10149786 -130166979 - L1PA15 LINE L1 -1944 4202 3143 3411 168 57 5 chr10 10149804 10150381 -130166384 + L1PA13 LINE L1 1 607 -6180 1718 175 55 37 chr10 10150381 10150706 -130166059 - MER1B DNA MER1_type -7 332 2 5990 225 62 2 chr10 10150707 10151931 -130164834 + L1PA13 LINE L1 608 1904 -4883 22 56 0 0 chr10 10153111 10153147 -130163618 + AT_rich Low_complexity Low_complexity 1 36 0 612 258 162 34 chr10 10153181 10153537 -130163228 + MLT1I LTR MaLR 1 450 0 2253 83 6 43 chr10 10153623 10153948 -130162817 - AluSp SINE Alu 0 313 1 25 51 0 0 chr10 10153974 10154013 -130162752 + AT_rich Low_complexity Low_complexity 1 39 0 209 295 163 12 chr10 10154072 10154238 -130162527 - MIR SINE MIR -1 261 71 209 346 145 11 chr10 10154298 10154477 -130162288 - MIR SINE MIR -13 249 47 27 29 0 0 chr10 10154990 10155024 -130161741 + AT_rich Low_complexity Low_complexity 1 34 0 3034 147 25 55 chr10 10155695 10156326 -130160439 - LTR9 LTR ERV1 0 612 1 3446 150 12 5 chr10 10156470 10157031 -130159734 + MER61E LTR ERV1 1 565 -4 802 295 62 37 chr10 10157280 10157714 -130159051 + L1MCc LINE L1 24 468 -5955 1417 279 89 33 chr10 10158020 10158181 -130158584 + L1MCc LINE L1 1945 2095 -5027 234 0 0 0 chr10 10158181 10158207 -130158558 + (CA)n Simple_repeat Simple_repeat 2 27 0 1417 279 89 33 chr10 10158207 10158638 -130158127 + L1MCc LINE L1 2095 2596 -4526 2130 119 3 3 chr10 10158638 10158931 -130157834 + AluSx SINE Alu 1 293 -19 1417 279 89 33 chr10 10158931 10159135 -130157630 + L1MCc LINE L1 2596 2787 -4335 340 261 18 73 chr10 10159132 10159297 -130157468 + L1ME1 LINE L1 6006 6161 -5 * 26 50 0 0 chr10 10159644 10159684 -130157081 + AT_rich Low_complexity Low_complexity 1 40 0 330 279 0 0 chr10 10160270 10160349 -130156416 + L2 LINE L2 3181 3259 -13 506 328 49 11 chr10 10160689 10160872 -130155893 + MIR SINE MIR 29 218 -44 2225 98 3 25 chr10 10161370 10161688 -130155077 - AluSp SINE Alu -2 311 1 345 262 128 43 chr10 10162126 10162290 -130154475 + MER3 DNA MER1_type 6 183 -26 7783 21 0 0 chr10 10162413 10163500 -130153265 + L1PA3 LINE L1 5066 6152 -3 240 331 37 37 chr10 10163590 10163753 -130153012 - L2 LINE L2 -2 3311 3149 2175 125 0 3 chr10 10164130 10164435 -130152330 + AluSx SINE Alu 1 304 -8 462 268 40 11 chr10 10164535 10164775 -130151990 - L1MB7 LINE L1 -11 6169 5915 25 31 0 0 chr10 10166070 10166102 -130150663 + AT_rich Low_complexity Low_complexity 1 32 0 1595 199 13 3 chr10 10166250 10166551 -130150214 + AluJo SINE Alu 1 304 -8 25 31 0 0 chr10 10166600 10166632 -130150133 + AT_rich Low_complexity Low_complexity 1 32 0 1899 182 9 0 chr10 10166788 10167129 -130149636 - MER7A DNA MER2_type -1 345 4 519 326 94 38 chr10 10167187 10167580 -130149185 + L2 LINE L2 1752 2166 -1148 1638 199 38 20 chr10 10167663 10168005 -130148760 + MLT1C LTR MaLR 90 437 -30 9352 155 22 8 chr10 10168005 10169599 -130147166 + Tigger1 DNA MER2_type 3 1619 -799 5539 79 11 35 chr10 10169599 10170039 -130146726 + L1PB1 LINE L1 5362 5776 -375 198 103 0 0 chr10 10170039 10170068 -130146697 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5539 79 11 35 chr10 10170068 10170436 -130146329 + L1PB1 LINE L1 5776 6151 0 22 56 0 0 chr10 10170446 10170482 -130146283 + AT_rich Low_complexity Low_complexity 1 36 0 895 168 6 0 chr10 10170482 10170649 -130146116 + Tigger1 DNA MER2_type 1621 1788 -630 6075 24 0 2 chr10 10170649 10171570 -130145195 - L1PA4 LINE L1 -181 5974 5055 1367 30 18 0 chr10 10171570 10171731 -130145034 + L1PA4 LINE L1 5982 6152 -3 210 71 0 0 chr10 10171761 10171789 -130144976 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2731 79 3 0 chr10 10171789 10172157 -130144608 + L1PB1 LINE L1 5783 6151 0 3412 159 42 10 chr10 10172187 10172808 -130143957 + Tigger1 DNA MER2_type 1778 2418 0 586 315 117 48 chr10 10172855 10173390 -130143375 + L2 LINE L2 2227 2723 -590 619 200 124 81 chr10 10173390 10173600 -130143165 + MER20 DNA MER1_type 1 219 0 586 315 117 48 chr10 10173600 10173918 -130142847 + L2 LINE L2 2723 3155 -158 2250 124 37 93 chr10 10173918 10174153 -130142612 + Tigger2a DNA MER2_type 1 199 -2509 2207 125 0 0 chr10 10174153 10174465 -130142300 - AluSx SINE Alu 0 312 1 2250 124 37 93 chr10 10174465 10174689 -130142076 + Tigger2a DNA MER2_type 199 434 0 586 315 117 48 chr10 10174689 10174802 -130141963 + L2 LINE L2 3155 3259 -54 405 0 0 0 chr10 10174803 10174848 -130141917 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 97 0 0 chr10 10174866 10174897 -130141868 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2888 126 23 71 chr10 10175134 10175728 -130141037 + LTR10A LTR ERV1 1 612 -21 1057 342 105 14 chr10 10175733 10176426 -130140339 + L2 LINE L2 158 913 -2401 773 314 131 16 chr10 10176428 10176704 -130140061 + L2 LINE L2 2439 2770 -544 1474 209 59 14 chr10 10176704 10177062 -130139703 - MLT1A2 LTR MaLR 0 374 1 773 314 131 16 chr10 10177062 10177158 -130139607 + L2 LINE L2 2770 2854 -460 1288 214 49 94 chr10 10177198 10177883 -130138882 - LTR9 LTR ERV1 0 779 1 871 299 41 60 chr10 10177897 10178312 -130138453 + L2 LINE L2 2905 3311 -2 302 279 101 6 chr10 10179539 10179697 -130137068 - L1ME3A LINE L1 -208 5962 5790 385 301 13 13 chr10 10179720 10179853 -130136912 - MLT1H LTR MaLR -374 175 1 836 266 97 48 chr10 10180027 10180358 -130136407 - MLT1I LTR MaLR 0 409 63 394 320 132 50 chr10 10181435 10181838 -130134927 - MLT1H LTR MaLR -43 506 71 302 200 14 14 chr10 10182025 10182095 -130134670 + Tigger5 DNA MER2_type 2251 2320 -3 246 288 18 9 chr10 10182150 10182261 -130134504 - L1MEc LINE L1 -3820 2395 2284 460 304 53 23 chr10 10182384 10182647 -130134118 - L1MEc LINE L1 -4177 2219 1949 264 250 38 12 chr10 10182987 10183067 -130133698 - L1PA15-16 LINE L1 -4348 2501 2420 241 226 0 0 chr10 10183124 10183177 -130133588 + CT-rich Low_complexity Low_complexity 3 55 0 488 296 53 76 chr10 10183229 10183533 -130133232 - L1MEc LINE L1 -4910 1295 999 182 250 225 12 chr10 10184579 10184659 -130132106 + L2 LINE L2 3214 3310 -3 222 286 24 12 chr10 10184712 10184796 -130131969 - L3b LINE CR1 -92 1491 1407 390 252 52 37 chr10 10185448 10185583 -130131182 + L2 LINE L2 3159 3295 -18 21 0 0 0 chr10 10185679 10185700 -130131065 + AT_rich Low_complexity Low_complexity 1 21 0 5123 92 29 20 chr10 10185998 10186785 -130129980 - SVA Other Other 0 1386 593 861 283 39 25 chr10 10186990 10187300 -130129465 + Zaphod DNA AcHobo 1 362 -3669 2132 100 37 7 chr10 10187300 10187600 -130129165 + AluSx SINE Alu 2 310 -2 861 283 39 25 chr10 10187600 10187617 -130129148 + Zaphod DNA AcHobo 362 377 -3654 712 278 33 41 chr10 10187854 10188099 -130128666 + Zaphod DNA AcHobo 362 604 -3427 1282 226 79 40 chr10 10188222 10188498 -130128267 + Zaphod DNA AcHobo 3341 3605 -426 180 0 0 0 chr10 10188498 10188518 -130128247 + (TA)n Simple_repeat Simple_repeat 2 21 0 1780 137 34 17 chr10 10188518 10188810 -130127955 - AluSx SINE Alu -15 297 1 1282 226 79 40 chr10 10188810 10189139 -130127626 + Zaphod DNA AcHobo 3604 3971 -60 830 205 51 44 chr10 10189222 10189241 -130127524 - MLT2B1 LTR ERVL -40 480 463 261 0 0 0 chr10 10189241 10189270 -130127495 + (TG)n Simple_repeat Simple_repeat 2 30 0 830 205 51 44 chr10 10189270 10189477 -130127288 - MLT2B1 LTR ERVL -57 463 196 224 336 18 27 chr10 10189674 10189784 -130126981 - MER5B DNA MER1_type -20 158 50 248 299 15 0 chr10 10190642 10190709 -130126056 - L3 LINE CR1 -2 1575 1508 307 326 181 5 chr10 10191153 10191368 -130125397 - L3 LINE CR1 -81 1496 1244 225 65 0 0 chr10 10191391 10191422 -130125343 + (TG)n Simple_repeat Simple_repeat 2 32 0 602 190 6 134 chr10 10191851 10192030 -130124735 - L2 LINE L2 0 3313 3158 496 255 108 0 chr10 10192044 10192201 -130124564 - MER104 DNA MER2_type -4 176 3 217 335 76 40 chr10 10192423 10192647 -130124118 + L2 LINE L2 2498 2729 -585 302 300 55 36 chr10 10193091 10193201 -130123564 + MIR SINE MIR 32 143 -119 28 29 0 0 chr10 10193468 10193503 -130123262 + AT_rich Low_complexity Low_complexity 1 35 0 31 44 0 0 chr10 10193655 10193700 -130123065 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr10 10193707 10193742 -130123023 + AT_rich Low_complexity Low_complexity 1 35 0 1720 178 7 0 chr10 10194315 10194602 -130122163 + AluSx SINE Alu 1 289 -23 1629 156 99 52 chr10 10194642 10195007 -130121758 + MLT1B LTR MaLR 1 382 -8 243 289 28 90 chr10 10195024 10195235 -130121530 - MLT1J LTR MaLR -75 436 239 188 268 197 14 chr10 10195484 10195555 -130121210 - L3 LINE CR1 -944 633 550 225 94 0 0 chr10 10196199 10196231 -130120534 + (TC)n Simple_repeat Simple_repeat 1 32 0 1493 214 20 3 chr10 10196775 10197074 -130119691 - MER2 DNA MER2_type 0 345 42 310 160 0 0 chr10 10197079 10197129 -130119636 + MER8 DNA MER2_type 190 239 0 405 325 87 28 chr10 10197395 10197845 -130118920 - L2 LINE L2 -193 3079 2554 3618 175 81 8 chr10 10197845 10198673 -130118092 - L1 LINE L1 -1238 4908 4021 279 347 49 62 chr10 10200377 10200746 -130116019 - L2 LINE L2 -452 2862 2499 416 310 116 31 chr10 10201254 10201676 -130115089 + L1M4 LINE L1 2947 3404 -2742 33 43 0 0 chr10 10201928 10201975 -130114790 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 10202083 10202112 -130114653 + AT_rich Low_complexity Low_complexity 1 29 0 321 333 81 0 chr10 10202882 10203005 -130113760 + L1M4 LINE L1 3711 3843 -2303 314 304 55 40 chr10 10203009 10203210 -130113555 - LTR67 LTR ERVL -18 539 336 438 309 100 26 chr10 10203878 10204379 -130112386 + L1MEc LINE L1 1247 1784 -4612 1024 301 90 22 chr10 10204576 10206019 -130110746 + L1MEc LINE L1 2023 3529 -2686 949 238 60 75 chr10 10206084 10206537 -130110228 - MLT2B3 LTR ERVL -1 553 108 226 204 93 0 chr10 10206517 10206571 -130110194 - MLT2B2 LTR ERVL -334 181 123 * 372 220 40 10 chr10 10206576 10206676 -130110089 - MLT2B3 LTR ERVL -377 177 75 346 243 0 0 chr10 10206746 10206820 -130109945 - MLT2B3 LTR ERVL -479 75 2 323 279 119 27 chr10 10206842 10207136 -130109629 + L1MEc LINE L1 3740 4060 -2155 639 286 154 39 chr10 10207336 10208162 -130108603 + L1MEc LINE L1 4349 5278 -937 2209 78 0 0 chr10 10208162 10208476 -130108289 + AluSx SINE Alu 1 314 0 639 286 154 39 chr10 10208476 10208497 -130108268 + L1MEc LINE L1 5278 5295 -920 2069 159 30 5 chr10 10208498 10208869 -130107896 - MER6 DNA MER2_type -1 864 225 1190 237 116 75 chr10 10208875 10209571 -130107194 + MER50 LTR ERV1 10 734 0 987 178 115 5 chr10 10209571 10209776 -130106989 - MER6 DNA MER2_type -637 228 1 324 64 0 0 chr10 10209886 10209933 -130106832 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1569 251 52 24 chr10 10210405 10210867 -130105898 + MER74B LTR ERVL 71 545 -77 276 91 76 45 chr10 10210813 10210879 -130105886 - MER88 LTR ERVL -317 147 80 * 872 42 0 50 chr10 10210994 10211114 -130105651 - AluSg/x SINE Alu -19 291 178 883 142 0 22 chr10 10211197 10211380 -130105385 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 720 176 6 22 chr10 10211405 10211587 -130105178 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 602 216 6 0 chr10 10211612 10211788 -130104977 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 734 185 12 8 chr10 10211806 10212067 -130104698 + (TCTA)n Simple_repeat Simple_repeat 1 262 0 272 277 4 2 chr10 10212122 10212225 -130104540 + L1MC/D LINE L1 4735 4838 -1308 30 89 0 0 chr10 10212349 10212428 -130104337 + AT_rich Low_complexity Low_complexity 1 79 0 360 292 167 5 chr10 10212552 10212768 -130103997 + L1MC/D LINE L1 5291 5534 -587 379 320 64 21 chr10 10212769 10213003 -130103762 + L1MC/D LINE L1 5573 5816 -1992 230 0 33 0 chr10 10213310 10213340 -130103425 + (TC)n Simple_repeat Simple_repeat 1 31 0 314 307 55 0 chr10 10213888 10214051 -130102714 + L1M4 LINE L1 4104 4275 -1871 180 111 0 0 chr10 10214085 10214112 -130102653 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 327 18 5 chr10 10214866 10215086 -130101679 - L1M4 LINE L1 -2832 3314 3092 352 319 129 8 chr10 10215166 10215429 -130101336 - L1M4 LINE L1 -3166 2980 2686 13162 149 52 21 chr10 10215431 10217386 -130099379 - Tigger1 DNA MER2_type 0 2418 379 1190 83 12 6 chr10 10217386 10217555 -130099210 - L1PA7 LINE L1 -2 6152 5983 13162 149 52 21 chr10 10217555 10217943 -130098822 - Tigger1 DNA MER2_type -2039 379 4 248 274 48 48 chr10 10218003 10218171 -130098594 - L1M4 LINE L1 -3526 2620 2453 242 232 13 84 chr10 10218298 10218453 -130098312 + T-rich Low_complexity Low_complexity 3 146 0 28 29 0 0 chr10 10218977 10219012 -130097753 + AT_rich Low_complexity Low_complexity 1 35 0 409 293 121 25 chr10 10220679 10220877 -130095888 + MIR SINE MIR 30 246 -16 2168 139 0 0 chr10 10220998 10221308 -130095457 + AluSg SINE Alu 1 310 0 26 64 0 0 chr10 10221431 10221478 -130095287 + AT_rich Low_complexity Low_complexity 1 47 0 316 362 48 38 chr10 10221493 10221808 -130094957 - HAL1 LINE L1 -1076 1431 1114 375 338 124 10 chr10 10222396 10222686 -130094079 + MLT1K LTR MaLR 81 403 -185 34 24 0 0 chr10 10223416 10223457 -130093308 + AT_rich Low_complexity Low_complexity 1 41 0 1642 192 13 68 chr10 10223499 10223879 -130092886 - MLT1A2 LTR MaLR -15 359 1 38 61 0 0 chr10 10225179 10225245 -130091520 + AT_rich Low_complexity Low_complexity 1 66 0 284 326 20 14 chr10 10226107 10226254 -130090511 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 532 316 40 29 chr10 10226262 10226537 -130090228 - LTR16B LTR ERVL -2 462 185 1339 217 10 59 chr10 10227309 10227491 -130089274 + MLT1A2 LTR MaLR 1 155 -219 2248 93 3 0 chr10 10227491 10227791 -130088974 + AluSx SINE Alu 1 301 -11 1339 217 10 59 chr10 10227791 10228000 -130088765 + MLT1A2 LTR MaLR 155 373 -1 1996 136 60 27 chr10 10228246 10228614 -130088151 - MSTC LTR MaLR -48 380 1 25 75 0 0 chr10 10229066 10229119 -130087646 + AT_rich Low_complexity Low_complexity 1 53 0 2139 110 0 0 chr10 10229149 10229468 -130087297 - AluSc SINE Alu 0 319 1 279 79 0 0 chr10 10229958 10229996 -130086769 + (A)n Simple_repeat Simple_repeat 1 38 0 2113 114 0 3 chr10 10230854 10231152 -130085613 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 10233908 10233929 -130082836 + AT_rich Low_complexity Low_complexity 1 21 0 433 269 123 41 chr10 10233932 10234151 -130082614 - MIR SINE MIR -8 254 18 1963 125 0 17 chr10 10234433 10234729 -130082036 - AluSq SINE Alu -22 291 1 412 299 0 9 chr10 10236091 10236198 -130080567 + L2 LINE L2 3188 3293 -20 2060 137 10 0 chr10 10236208 10236515 -130080250 - AluSx SINE Alu -2 310 1 524 239 104 18 chr10 10237881 10238044 -130078721 + MER5B DNA MER1_type 2 178 0 2175 114 3 13 chr10 10238647 10238955 -130077810 - AluSx SINE Alu -7 305 1 305 253 22 11 chr10 10239090 10239181 -130077584 + MER94 DNA DNA 9 100 -34 2427 164 0 5 chr10 10239353 10239773 -130076992 - MSTA LTR MaLR -2 426 9 23 0 0 0 chr10 10240821 10240844 -130075921 + AT_rich Low_complexity Low_complexity 1 23 0 37 52 0 0 chr10 10240890 10240948 -130075817 + AT_rich Low_complexity Low_complexity 1 58 0 656 161 0 0 chr10 10241113 10241231 -130075534 + Ricksha DNA DNA 2 119 -1062 1177 126 10 10 chr10 10241243 10241441 -130075324 + Ricksha DNA DNA 240 437 -2809 1871 164 55 24 chr10 10241441 10241989 -130074776 - MLT2A2 LTR ERVL 0 554 1 12667 160 35 19 chr10 10241989 10242347 -130074418 + Ricksha DNA DNA 433 784 -2462 2073 186 45 102 chr10 10242347 10242891 -130073874 + LTR9 LTR ERV1 1 504 -108 2102 115 0 7 chr10 10242891 10243187 -130073578 - AluSg SINE Alu -16 294 1 2073 186 45 102 chr10 10243187 10243291 -130073474 + LTR9 LTR ERV1 504 612 0 12667 160 35 19 chr10 10243291 10243940 -130072825 + Ricksha DNA DNA 784 1421 -1825 1971 130 0 61 chr10 10243940 10244270 -130072495 + AluSx SINE Alu 3 312 0 12667 160 35 19 chr10 10244270 10245948 -130070817 + Ricksha DNA DNA 1421 3238 -8 547 330 98 55 chr10 10245990 10246896 -130069869 - L2 LINE L2 -444 2870 1926 394 282 96 6 chr10 10247059 10247215 -130069550 - L1MC/D LINE L1 -2027 5781 5612 2010 112 54 0 chr10 10247494 10247772 -130068993 + AluSq SINE Alu 1 293 -20 206 107 71 0 chr10 10248177 10248233 -130068532 + GA-rich Low_complexity Low_complexity 3 62 0 22 35 0 0 chr10 10248273 10248302 -130068463 + AT_rich Low_complexity Low_complexity 1 29 0 793 139 0 0 chr10 10249042 10249171 -130067594 - L1PB1 LINE L1 0 6151 6023 641 168 16 0 chr10 10249239 10249364 -130067401 - L1PB1 LINE L1 -2 6149 6023 278 271 24 12 chr10 10249401 10249486 -130067279 + MIR3 SINE MIR 116 201 -7 2351 116 58 0 chr10 10250899 10251243 -130065522 + THE1B LTR MaLR 1 364 0 291 309 9 74 chr10 10251389 10251606 -130065159 + L2 LINE L2 1910 2112 -1202 292 296 114 45 chr10 10251932 10252152 -130064613 + MIR SINE MIR 4 238 -24 222 364 48 43 chr10 10252182 10252534 -130064231 + L2 LINE L2 2575 2928 -386 446 286 11 14 chr10 10255353 10255490 -130061275 + MIR SINE MIR 37 172 -36 2111 136 37 8 chr10 10255748 10256102 -130060663 + THE1B LTR MaLR 1 364 0 1278 177 8 21 chr10 10256168 10256411 -130060354 - AluJo SINE Alu 0 312 73 205 332 33 75 chr10 10256524 10256765 -130060000 + L2 LINE L2 2507 2737 -577 585 52 0 0 chr10 10257159 10257236 -130059529 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 1568 177 3 52 chr10 10258986 10259296 -130057469 + AluJo SINE Alu 3 297 -15 221 345 109 0 chr10 10261093 10261203 -130055562 + MIR SINE MIR 5 126 -136 1778 171 10 16 chr10 10261548 10261858 -130054907 + AluJo SINE Alu 1 308 -4 2880 6 0 0 chr10 10261930 10262241 -130054524 + AluYa5 SINE Alu 1 311 0 1560 226 32 27 chr10 10262950 10263388 -130053377 - LTR47B LTR ERVL -3 440 1 2383 95 0 0 chr10 10264357 10264663 -130052102 - AluSx SINE Alu -6 306 1 976 105 0 14 chr10 10265168 10265311 -130051454 - AluSg/x SINE Alu 0 312 172 2239 92 3 22 chr10 10265314 10265628 -130051137 - AluSx SINE Alu -4 308 1 293 303 25 17 chr10 10266042 10266161 -130050604 - L3b LINE CR1 -202 1381 1262 1583 185 7 26 chr10 10266241 10266543 -130050222 + AluJo SINE Alu 1 296 -16 2141 95 0 7 chr10 10266547 10266854 -130049911 + AluSg SINE Alu 1 305 0 266 267 22 11 chr10 10266995 10267085 -130049680 + Charlie7 DNA MER1_type 1 91 -2521 2151 112 7 0 chr10 10267096 10267392 -130049373 + AluY SINE Alu 1 298 -13 918 257 36 41 chr10 10267396 10267808 -130048957 - L1ME2 LINE L1 -2 6162 5753 362 287 29 22 chr10 10267818 10267954 -130048811 - L1MDa LINE L1 -4022 2518 2382 3356 237 45 46 chr10 10267956 10269798 -130046967 - L1MD2 LINE L1 -21 6732 4898 649 237 0 0 chr10 10269808 10269926 -130046839 - FLAM_C SINE Alu -25 118 1 312 180 27 54 chr10 10269926 10270037 -130046728 - L1MD2 LINE L1 -1640 4900 4793 * 875 201 53 26 chr10 10270022 10270361 -130046404 - L1MD2 LINE L1 -2919 3621 3274 239 215 0 15 chr10 10270345 10270410 -130046355 - L1ME2 LINE L1 -493 5749 5686 * 1637 210 89 29 chr10 10270460 10271045 -130045720 - L1MD2 LINE L1 -4902 1638 1019 428 50 0 17 chr10 10271047 10271107 -130045658 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 245 245 20 119 chr10 10271628 10271779 -130044986 - L1MD2 LINE L1 -5589 951 816 303 285 41 16 chr10 10271959 10272082 -130044683 - L1MD2 LINE L1 -6357 183 58 487 256 6 18 chr10 10272152 10272316 -130044449 - L1MEc LINE L1 -4314 2082 1921 892 176 29 33 chr10 10272502 10272712 -130044053 - MLT2B1 LTR ERVL -11 509 301 2219 87 47 3 chr10 10273399 10273699 -130043066 + AluSp SINE Alu 1 313 0 560 264 57 60 chr10 10273723 10274041 -130042724 - LTR16A1 LTR ERVL 0 457 141 220 158 70 0 chr10 10274454 10274511 -130042254 + (TA)n Simple_repeat Simple_repeat 2 62 0 992 160 0 0 chr10 10274545 10274695 -130042070 - FRAM SINE Alu -30 146 1 24 32 0 0 chr10 10275588 10275619 -130041146 + AT_rich Low_complexity Low_complexity 1 31 0 269 197 79 0 chr10 10275877 10275953 -130040812 + MIR SINE MIR 105 186 -76 207 100 0 0 chr10 10276532 10276562 -130040203 + (TCC)n Simple_repeat Simple_repeat 3 32 0 248 275 29 0 chr10 10276817 10276886 -130039879 - MIR SINE MIR -108 154 84 357 282 14 112 chr10 10277637 10277985 -130038780 + MER90 LTR ERV1 294 607 -7 2278 60 0 7 chr10 10278108 10278422 -130038343 - AluY SINE Alu 0 312 1 201 39 0 0 chr10 10278764 10278790 -130037975 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2094 145 0 10 chr10 10280047 10280351 -130036414 - AluSx SINE Alu -9 303 3 677 257 53 56 chr10 10280352 10280804 -130035961 - HsTC2 DNA Tc2 -14 1884 1247 4821 82 5 0 chr10 10281454 10282097 -130034668 - L1PA10 LINE L1 -4 6164 5519 692 257 32 11 chr10 10284194 10284381 -130032384 + MER20 DNA MER1_type 17 207 -12 605 284 47 5 chr10 10285362 10285577 -130031188 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr10 10286159 10286190 -130030575 + AT_rich Low_complexity Low_complexity 1 31 0 2111 115 3 10 chr10 10286783 10287087 -130029678 + AluSq SINE Alu 1 302 -11 228 259 0 0 chr10 10287115 10287169 -130029596 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2824 25 0 0 chr10 10287544 10287859 -130028906 - AluYb8 SINE Alu -3 315 1 189 74 0 0 chr10 10288791 10288818 -130027947 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 10288830 10288852 -130027913 + AT_rich Low_complexity Low_complexity 1 22 0 40575 37 2 7 chr10 10288943 10294739 -130022026 + L1PA3 LINE L1 390 6155 0 29 28 0 0 chr10 10294739 10294775 -130021990 + AT_rich Low_complexity Low_complexity 1 36 0 741 268 91 50 chr10 10294817 10295213 -130021552 - MLT1G1 LTR MaLR -183 412 1 23 33 0 0 chr10 10296381 10296411 -130020354 + AT_rich Low_complexity Low_complexity 1 30 0 413 286 166 45 chr10 10296636 10296941 -130019824 - L1ME3 LINE L1 -211 5951 5684 2552 47 3 0 chr10 10296941 10297240 -130019525 + AluY SINE Alu 1 300 -11 413 286 166 45 chr10 10297240 10297553 -130019212 - L1ME3 LINE L1 -478 5684 5258 745 290 86 17 chr10 10297630 10298151 -130018614 - L1ME3 LINE L1 -1091 5055 4499 1990 181 22 54 chr10 10298368 10298438 -130018327 - Tigger2a DNA MER2_type -2274 434 363 2205 113 7 0 chr10 10298438 10298739 -130018026 - AluSx SINE Alu -9 303 1 1990 181 22 54 chr10 10298739 10299116 -130017649 - Tigger2a DNA MER2_type -2345 363 1 370 292 36 70 chr10 10299141 10299525 -130017240 - L1ME3 LINE L1 -1984 4162 3792 28 0 0 0 chr10 10300907 10300935 -130015830 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 10301254 10301275 -130015490 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10301319 10301340 -130015425 + AT_rich Low_complexity Low_complexity 1 21 0 2299 93 3 0 chr10 10301718 10302020 -130014745 - AluSx SINE Alu -9 303 1 27 0 0 0 chr10 10302154 10302181 -130014584 + AT_rich Low_complexity Low_complexity 1 27 0 2125 135 3 0 chr10 10302211 10302523 -130014242 - AluSq SINE Alu 0 313 1 23 33 0 0 chr10 10302552 10302582 -130014183 + AT_rich Low_complexity Low_complexity 1 30 0 231 265 52 44 chr10 10302741 10302877 -130013888 + L1M4 LINE L1 4802 4938 -1208 2295 275 62 10 chr10 10303035 10304017 -130012748 + L1MC3 LINE L1 344 1375 -4849 4067 179 35 15 chr10 10304025 10305286 -130011479 + L1PB4 LINE L1 4843 6129 -27 * 11212 207 32 13 chr10 10305275 10309070 -130007695 + L1PA16 LINE L1 2300 6166 0 1424 236 63 9 chr10 10309063 10309504 -130007261 + L1MC3 LINE L1 4299 4763 -1801 * 1927 224 23 121 chr10 10309504 10310168 -130006597 + MER77 LTR ERV1 3 601 -4 2470 228 48 63 chr10 10310172 10310205 -130006560 + L1MC3 LINE L1 4757 4789 -1775 2296 87 10 0 chr10 10310205 10310494 -130006271 + AluSc SINE Alu 1 292 -17 2470 228 48 63 chr10 10310494 10312072 -130004693 + L1MC3 LINE L1 4789 5821 -743 376 197 88 80 chr10 10314069 10314206 -130002559 - L2 LINE L2 -1 3312 3175 2762 145 19 11 chr10 10314236 10314713 -130002052 - L1PA15 LINE L1 -17 6148 5668 461 313 18 0 chr10 10314770 10314936 -130001829 - L1M4 LINE L1 -1050 5096 4928 2173 112 42 31 chr10 10314987 10315345 -130001420 + THE1B LTR MaLR 3 364 0 287 266 93 85 chr10 10315508 10316004 -130000761 - L1M4 LINE L1 -1541 4605 4106 1675 194 71 8 chr10 10316066 10316431 -130000334 - MLT1B LTR MaLR -2 388 1 462 233 167 11 chr10 10316460 10316730 -130000035 - L1MDa LINE L1 -3663 2877 2566 326 206 137 55 chr10 10316749 10316895 -129999870 - L1MDa LINE L1 -3966 2574 2417 2447 48 3 45 chr10 10317271 10317585 -129999180 - AluY SINE Alu -8 303 3 667 297 21 5 chr10 10317587 10317779 -129998986 - L2 LINE L2 -599 2715 2521 1647 251 87 50 chr10 10317787 10318364 -129998401 - MER77 LTR ERV1 -7 598 1 734 346 85 0 chr10 10318392 10318733 -129998032 - L2 LINE L2 -868 2446 2077 2087 110 7 7 chr10 10319204 10319496 -129997269 + AluSp SINE Alu 4 295 -18 427 281 85 26 chr10 10319532 10319802 -129996963 - L1ME2 LINE L1 -213 5951 5666 281 277 24 0 chr10 10320167 10320250 -129996515 + L1MC4a LINE L1 5603 5687 -2121 479 235 132 52 chr10 10320280 10320667 -129996098 + L1MC4a LINE L1 5757 6174 -1634 1225 290 89 29 chr10 10320796 10321523 -129995242 + L1MC4 LINE L1 7122 7892 -150 22 0 0 0 chr10 10321754 10321776 -129994989 + AT_rich Low_complexity Low_complexity 1 22 0 1304 299 72 52 chr10 10321920 10322888 -129993877 + L2 LINE L2 2328 3313 0 315 267 35 0 chr10 10323313 10323399 -129993366 - L2 LINE L2 -2 3270 3182 23 0 0 0 chr10 10324186 10324209 -129992556 + AT_rich Low_complexity Low_complexity 1 23 0 2018 154 0 7 chr10 10325696 10326002 -129990763 - AluSg SINE Alu -6 304 1 1414 215 44 9 chr10 10326104 10326420 -129990345 + MSTD LTR MaLR 70 396 0 571 320 254 19 chr10 10326426 10327060 -129989705 - L2 LINE L2 -527 2787 2005 198 167 0 0 chr10 10327317 10327353 -129989412 + (CA)n Simple_repeat Simple_repeat 1 36 0 48 43 0 0 chr10 10327691 10327760 -129989005 + AT_rich Low_complexity Low_complexity 1 69 0 1191 111 23 0 chr10 10327763 10327923 -129988842 - AluSp SINE Alu -19 294 128 2396 80 0 3 chr10 10327923 10328235 -129988530 - AluY SINE Alu 0 311 1 333 291 41 64 chr10 10329463 10329635 -129987130 - L1 LINE L1 -860 5286 5119 25 0 0 0 chr10 10330292 10330317 -129986448 + AT_rich Low_complexity Low_complexity 1 25 0 1982 132 3 16 chr10 10330339 10330642 -129986123 + AluSx SINE Alu 1 299 -13 2493 70 0 0 chr10 10330743 10331043 -129985722 - AluY SINE Alu -11 300 1 41 72 0 0 chr10 10331133 10331216 -129985549 + AT_rich Low_complexity Low_complexity 1 83 0 220 299 90 0 chr10 10331249 10331316 -129985449 - L2 LINE L2 -44 3269 3197 186 43 0 0 chr10 10331416 10331439 -129985326 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 401 265 78 54 chr10 10331867 10332033 -129984732 + MLT1L LTR MaLR 252 421 -194 1743 152 61 25 chr10 10332417 10332779 -129983986 + THE1C LTR MaLR 1 375 0 22 56 0 0 chr10 10333232 10333268 -129983497 + AT_rich Low_complexity Low_complexity 1 36 0 266 306 49 9 chr10 10334053 10334175 -129982590 - MIR SINE MIR -81 127 4 562 241 216 10 chr10 10334214 10334413 -129982352 - MIR SINE MIR -16 246 7 288 308 39 0 chr10 10334512 10334590 -129982175 + L2 LINE L2 3195 3275 -38 1053 211 75 0 chr10 10334604 10334713 -129982052 - L1MA9 LINE L1 -39 6273 6174 186 43 0 0 chr10 10334713 10334736 -129982029 + (TG)n Simple_repeat Simple_repeat 1 23 0 1053 211 75 0 chr10 10334736 10334892 -129981873 - L1MA9 LINE L1 -138 6174 5988 232 246 18 0 chr10 10335290 10335347 -129981418 + MIR SINE MIR 82 139 -123 301 273 73 9 chr10 10335810 10335920 -129980845 - MER106B DNA MER1_type 0 1059 943 1113 255 96 32 chr10 10335920 10336359 -129980406 - MLT1C LTR MaLR 0 467 1 1925 135 0 122 chr10 10336379 10336763 -129980002 + MER1B DNA MER1_type 1 337 0 351 44 0 0 chr10 10336766 10336811 -129979954 + (TG)n Simple_repeat Simple_repeat 2 46 0 856 274 18 14 chr10 10336934 10337157 -129979608 + MER58A DNA MER1_type 1 224 0 22 0 0 0 chr10 10337590 10337612 -129979153 + AT_rich Low_complexity Low_complexity 1 22 0 3874 177 99 10 chr10 10337742 10338531 -129978234 - MER21B LTR ERV1 -4 859 1 309 267 50 50 chr10 10338591 10338711 -129978054 - MIR SINE MIR -113 149 30 800 176 8 0 chr10 10339346 10339477 -129977288 - FLAM_C SINE Alu -11 132 1 203 169 51 0 chr10 10339500 10339559 -129977206 + (TA)n Simple_repeat Simple_repeat 2 63 0 208 130 87 0 chr10 10339592 10339684 -129977081 + (TA)n Simple_repeat Simple_repeat 1 100 0 1721 189 70 44 chr10 10339696 10340150 -129976615 + MLT1D LTR MaLR 40 505 0 2165 115 3 3 chr10 10340856 10341152 -129975613 - AluSx SINE Alu -16 296 1 984 221 4 35 chr10 10341644 10341870 -129974895 - MER20 DNA MER1_type 0 219 1 324 322 99 67 chr10 10343214 10343962 -129972803 + HAL1 LINE L1 57 828 -1679 1923 264 63 22 chr10 10344151 10344734 -129972031 + L1MDa LINE L1 1 607 -5933 529 255 29 21 chr10 10344763 10345012 -129971753 + L1MDa LINE L1 1078 1355 -5188 862 238 45 77 chr10 10345021 10345400 -129971365 + L1MDa LINE L1 2942 3308 -3232 508 262 0 24 chr10 10345394 10345520 -129971245 + L1MD2 LINE L1 6031 6153 -206 * 384 290 28 0 chr10 10345508 10345653 -129971112 + L1MD3 LINE L1 7832 7980 -15 * 305 320 59 10 chr10 10345692 10345895 -129970870 + HAL1 LINE L1 1107 1319 -1188 21 0 0 0 chr10 10345945 10345966 -129970799 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10346628 10346649 -129970116 + AT_rich Low_complexity Low_complexity 1 21 0 403 317 24 77 chr10 10347420 10347628 -129969137 + MLT1J2 LTR MaLR 2 198 -248 1429 190 20 14 chr10 10347873 10347921 -129968844 + L1MB2 LINE L1 5452 5498 -686 6368 152 50 7 chr10 10347921 10349100 -129967665 + Tigger3b DNA MER2_type 2 1231 0 1429 190 20 14 chr10 10349100 10349346 -129967419 + L1MB2 LINE L1 5498 5748 -436 412 214 22 0 chr10 10349387 10349476 -129967289 - L1MB1 LINE L1 -274 5894 5804 753 288 32 21 chr10 10349478 10349522 -129967243 - L1M4 LINE L1 -1832 4314 4272 487 56 127 0 chr10 10349522 10349593 -129967172 + MADE1 DNA Mariner 1 80 0 753 288 32 21 chr10 10349593 10349833 -129966932 - L1M4 LINE L1 -1874 4272 4027 6939 109 12 6 chr10 10349866 10351000 -129965765 - L1MA3 LINE L1 -6 6299 5158 230 202 40 56 chr10 10351051 10351176 -129965589 - L1M4 LINE L1 -2160 3986 3864 254 88 263 0 chr10 10351222 10351279 -129965486 + L1PA14 LINE L1 6090 6161 0 832 214 22 2 chr10 10351364 10351554 -129965211 + L1MB2 LINE L1 5900 6092 -79 4897 134 24 22 chr10 10351744 10352578 -129964187 - L1PA15 LINE L1 -5 6160 5325 388 131 107 0 chr10 10352579 10352663 -129964102 + L1MB2 LINE L1 6077 6169 -2 534 186 0 0 chr10 10352729 10352831 -129963934 + L1MB8 LINE L1 6071 6172 -6 216 302 62 31 chr10 10353200 10353296 -129963469 + MIR SINE MIR 18 116 -92 219 170 0 0 chr10 10353326 10353373 -129963392 + (TA)n Simple_repeat Simple_repeat 1 47 0 1675 171 0 7 chr10 10354676 10354956 -129961809 + AluSx SINE Alu 23 300 -12 238 254 17 0 chr10 10355072 10355131 -129961634 + MLT1H1 LTR MaLR 30 89 -466 765 245 8 59 chr10 10355281 10355518 -129961247 + MLT1H1 LTR MaLR 329 553 -2 524 249 31 13 chr10 10355808 10355991 -129960774 + MLT1H LTR MaLR 372 549 0 24 0 0 0 chr10 10356969 10356993 -129959772 + AT_rich Low_complexity Low_complexity 1 24 0 1925 149 16 43 chr10 10358014 10358384 -129958381 + THE1B LTR MaLR 5 364 0 180 0 0 0 chr10 10358435 10358455 -129958310 + (CA)n Simple_repeat Simple_repeat 2 21 0 334 107 0 14 chr10 10358868 10359070 -129957695 + AluSx SINE Alu 26 291 -9 1876 134 31 0 chr10 10360609 10360900 -129955865 + AluSx SINE Alu 1 300 -12 189 310 35 0 chr10 10361172 10361230 -129955535 - L2 LINE L2 -4 3309 3250 25 31 0 0 chr10 10361264 10361296 -129955469 + AT_rich Low_complexity Low_complexity 1 32 0 358 294 44 15 chr10 10361491 10361627 -129955138 + MIR SINE MIR 53 192 -70 251 0 0 56 chr10 10361928 10361964 -129954801 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 502 304 124 55 chr10 10362027 10362550 -129954215 + L1MEd LINE L1 536 1094 -5025 1800 163 3 13 chr10 10362553 10362854 -129953911 + AluSx SINE Alu 1 298 -14 5352 129 12 37 chr10 10363532 10363609 -129953156 + L1PB3 LINE L1 5254 5331 -823 2174 109 3 10 chr10 10363609 10363921 -129952844 + AluSx SINE Alu 1 310 -2 5352 129 12 37 chr10 10363921 10364765 -129952000 + L1PB3 LINE L1 5331 6152 -2 314 333 0 8 chr10 10365315 10365441 -129951324 + L1ME LINE L1 5639 5763 -407 2114 143 0 0 chr10 10365631 10365938 -129950827 + AluSx SINE Alu 1 307 -5 24 53 0 0 chr10 10366097 10366135 -129950630 + AT_rich Low_complexity Low_complexity 1 38 0 512 168 0 19 chr10 10367392 10367499 -129949266 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 241 152 0 0 chr10 10367505 10367551 -129949214 - LTR66 LTR ERVL -171 439 394 284 161 16 0 chr10 10367592 10367654 -129949111 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 25 65 0 0 chr10 10367668 10367714 -129949051 + AT_rich Low_complexity Low_complexity 1 46 0 439 289 57 38 chr10 10367913 10368055 -129948710 + L1ME3A LINE L1 5717 5866 -304 375 167 0 71 chr10 10368055 10368139 -129948626 - MADE1 DNA Mariner 0 80 3 439 289 57 38 chr10 10368139 10368207 -129948558 + L1ME3A LINE L1 5866 5931 -239 1341 225 126 39 chr10 10370368 10370732 -129946033 - MSTD LTR MaLR 0 396 1 795 51 0 0 chr10 10373516 10373614 -129943151 + HY3 scRNA scRNA 2 99 -2 180 176 0 0 chr10 10373739 10373773 -129942992 + (TA)n Simple_repeat Simple_repeat 2 35 0 183 346 72 53 chr10 10376418 10376626 -129940139 + MIR SINE MIR 34 245 -17 552 77 0 0 chr10 10376721 10376799 -129939966 - L1PA7 LINE L1 -2 6152 6075 1550 59 17 59 chr10 10377854 10378092 -129938673 + L1PA8 LINE L1 5939 6166 -6 665 178 62 0 chr10 10378105 10378234 -129938531 - AluSg/x SINE Alu -6 306 170 253 179 0 0 chr10 10378337 10378376 -129938389 - Alu SINE Alu -263 39 1 264 241 9 125 chr10 10378433 10378508 -129938257 + L1M4 LINE L1 4008 4069 -2077 1639 62 0 0 chr10 10378508 10378723 -129938042 + AluY SINE Alu 86 300 0 264 241 9 125 chr10 10378723 10378758 -129938007 + L1M4 LINE L1 4069 4106 -2040 1186 272 113 24 chr10 10378758 10379110 -129937655 + L1MEc LINE L1 292 712 -5684 2062 176 51 10 chr10 10379110 10379524 -129937241 + MSTB1 LTR MaLR 2 432 0 1186 272 113 24 chr10 10379524 10379722 -129937043 + L1MEc LINE L1 712 891 -5505 634 263 61 5 chr10 10379729 10379942 -129936823 + L1MC2 LINE L1 34 258 -6168 3073 219 105 29 chr10 10379943 10381098 -129935667 + L1MC2 LINE L1 778 2019 -4407 1316 252 24 0 chr10 10381104 10381441 -129935324 - L1M1 LINE L1 -4533 3032 2688 1092 167 34 5 chr10 10381443 10381647 -129935118 + MER2 DNA MER2_type 2 211 -134 2454 63 0 3 chr10 10381689 10381989 -129934776 - AluY SINE Alu -12 299 1 1642 235 29 29 chr10 10382048 10382815 -129933950 - L1M3c LINE L1 -4520 2517 1810 1401 279 77 3 chr10 10383060 10383437 -129933328 - L1M3c LINE L1 -6619 411 7 6059 257 37 20 chr10 10383450 10385852 -129930913 + L1MC2 LINE L1 2054 4492 -1934 359 148 0 0 chr10 10385852 10385930 -129930835 + AluSp/q SINE Alu 233 310 0 6059 257 37 20 chr10 10385930 10386226 -129930539 + L1MC2 LINE L1 4492 4781 -1645 1474 218 112 4 chr10 10386388 10386878 -129929887 + L1MC2 LINE L1 4799 5341 -1085 39 74 0 0 chr10 10386898 10386979 -129929786 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr10 10387069 10387094 -129929671 + AT_rich Low_complexity Low_complexity 1 25 0 5698 134 38 3 chr10 10387258 10388477 -129928288 - L1PA13 LINE L1 -13 6150 4888 5094 187 37 13 chr10 10388479 10389708 -129927057 + L1MC2 LINE L1 5360 6618 -6 2364 262 133 31 chr10 10389715 10391930 -129924835 + L1MEc LINE L1 878 3300 -2915 2231 120 0 0 chr10 10392556 10392865 -129923900 - AluSg SINE Alu -1 309 1 2724 131 22 77 chr10 10396162 10396836 -129919929 - MER4B LTR ERV1 0 903 3 1718 209 99 16 chr10 10396940 10397384 -129919381 - LTR29 LTR ERV1 -3 619 139 2159 82 17 0 chr10 10397420 10397711 -129919054 - MER41A LTR ERV1 0 554 259 5134 125 97 127 chr10 10397711 10399312 -129917453 + pTR5 LTR ERV1 745 2438 0 1571 118 73 0 chr10 10399315 10399561 -129917204 - MER41A LTR ERV1 -290 264 1 248 264 0 35 chr10 10399561 10399623 -129917142 - MER34 LTR ERV1 -483 59 1 1239 258 127 19 chr10 10399889 10400369 -129916396 - LTR10B LTR ERV1 -3 544 13 276 260 13 0 chr10 10400616 10400693 -129916072 - MER67B LTR ERV1 -2 659 582 1532 137 42 78 chr10 10400709 10401068 -129915697 + MER4A LTR ERV1 1 346 -318 481 185 237 63 chr10 10401078 10401348 -129915417 + MER4C LTR ERV1 149 465 0 1487 180 21 80 chr10 10401354 10401391 -129915374 - MER31B LTR ERV1 -101 365 327 1206 200 39 58 chr10 10401391 10401701 -129915064 + AluJo SINE Alu 1 304 -8 1487 180 21 80 chr10 10401701 10402040 -129914725 - MER31B LTR ERV1 -139 327 11 263 175 0 32 chr10 10403376 10403439 -129913326 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1871 181 85 57 chr10 10403520 10404016 -129912749 + MER67D LTR ERV1 1 510 -4 670 240 65 99 chr10 10404618 10405086 -129911679 + MER110 LTR ERV1 61 491 0 202 345 12 0 chr10 10405122 10405206 -129911559 + L2 LINE L2 2606 2690 -624 6697 261 86 24 chr10 10405928 10410070 -129906695 - L1ME1 LINE L1 -21 6214 1863 5314 163 40 6 chr10 10410119 10411097 -129905668 - L1MC1 LINE L1 0 6333 5323 22 0 0 0 chr10 10411546 10411568 -129905197 + AT_rich Low_complexity Low_complexity 1 22 0 298 256 41 60 chr10 10411768 10412073 -129904692 - L1ME1 LINE L1 -4533 1863 1463 428 296 79 4 chr10 10412092 10412359 -129904406 - L1ME1 LINE L1 -5030 1366 1080 1745 276 77 51 chr10 10412369 10412416 -129904349 - L1ME1 LINE L1 -5451 945 901 1661 152 44 3 chr10 10412416 10412713 -129904052 - AluJo SINE Alu -3 309 1 1745 276 77 51 chr10 10412713 10412865 -129903900 - L1ME1 LINE L1 -5495 901 754 2085 117 0 0 chr10 10412865 10413155 -129903610 + AluSx SINE Alu 1 290 -22 1745 276 77 51 chr10 10413155 10413815 -129902950 - L1ME1 LINE L1 -5642 754 63 459 0 0 0 chr10 10414432 10414483 -129902282 + (TA)n Simple_repeat Simple_repeat 1 51 0 225 0 0 0 chr10 10414482 10414507 -129902258 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 648 169 5 33 chr10 10414758 10414942 -129901823 + CT-rich Low_complexity Low_complexity 2 180 0 270 0 0 0 chr10 10415546 10415576 -129901189 + (TG)n Simple_repeat Simple_repeat 1 30 0 308 227 57 136 chr10 10416342 10416518 -129900247 - MIR SINE MIR -42 220 59 26 0 0 0 chr10 10417259 10417285 -129899480 + AT_rich Low_complexity Low_complexity 1 26 0 347 271 187 6 chr10 10417342 10417508 -129899257 - L2 LINE L2 0 3313 3118 3533 109 16 3 chr10 10417653 10418289 -129898476 + L1P5 LINE L1 5141 5783 -368 335 234 32 11 chr10 10418300 10418386 -129898379 - L1MC4 LINE L1 -1339 6703 6613 2404 97 25 0 chr10 10418386 10418747 -129898018 + L1PB1 LINE L1 5782 6151 0 9958 19 1 35 chr10 10418945 10420910 -129895855 + L1PA3 LINE L1 4216 6150 -5 189 0 0 0 chr10 10420940 10420961 -129895804 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 22 70 0 0 chr10 10421737 10421780 -129894985 + AT_rich Low_complexity Low_complexity 1 43 0 718 266 60 75 chr10 10422118 10422570 -129894195 - HAL1 LINE L1 -675 1832 1388 440 294 24 59 chr10 10422781 10422951 -129893814 - HAL1 LINE L1 -1234 1273 1110 1933 148 3 7 chr10 10422998 10423302 -129893463 + AluSx SINE Alu 1 303 -9 4804 63 27 3 chr10 10424280 10424918 -129891847 - L1PA8 LINE L1 -6 6166 5514 24 32 0 0 chr10 10426102 10426133 -129890632 + AT_rich Low_complexity Low_complexity 1 31 0 3017 174 50 20 chr10 10426133 10426817 -129889948 - L1MA6 LINE L1 -4 6296 5593 981 172 0 91 chr10 10426823 10427021 -129889744 - AluJo SINE Alu -30 282 103 753 185 0 15 chr10 10427040 10427175 -129889590 - AluJo SINE Alu -177 135 3 1582 207 8 6 chr10 10427175 10427528 -129889237 - L1MA6 LINE L1 -690 5610 5257 1530 210 3 20 chr10 10427539 10427834 -129888931 - AluJo SINE Alu -22 290 1 320 296 0 10 chr10 10428157 10428255 -129888510 + (TA)n Simple_repeat Simple_repeat 1 97 0 351 150 0 0 chr10 10428280 10428340 -129888425 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 369 102 0 0 chr10 10428978 10429037 -129887728 + (TATG)n Simple_repeat Simple_repeat 2 60 0 253 323 65 8 chr10 10429694 10429818 -129886947 + MIR SINE MIR 120 250 -12 264 253 195 0 chr10 10429843 10429930 -129886835 - L2 LINE L2 0 3313 3210 361 185 39 15 chr10 10429962 10430092 -129886673 + (TA)n Simple_repeat Simple_repeat 2 134 0 216 172 54 11 chr10 10430105 10430198 -129886567 + (TA)n Simple_repeat Simple_repeat 2 98 0 314 289 0 11 chr10 10430198 10430288 -129886477 - L1MC4 LINE L1 -1340 6702 6614 * 327 261 11 33 chr10 10430221 10430313 -129886452 + L1MC4 LINE L1 6614 6703 -1339 341 121 65 25 chr10 10430313 10430712 -129886053 + (TA)n Simple_repeat Simple_repeat 1 415 0 271 221 35 9 chr10 10430724 10430837 -129885928 + (TA)n Simple_repeat Simple_repeat 1 116 0 564 212 43 86 chr10 10430868 10431123 -129885642 - L2 LINE L2 -157 3156 2913 245 254 0 70 chr10 10431243 10431314 -129885451 + L2 LINE L2 3203 3268 -4 288 239 28 0 chr10 10432703 10432774 -129883991 + L1ME LINE L1 5734 5806 -315 602 162 0 19 chr10 10434106 10434211 -129882554 - MLT1A2 LTR MaLR -271 103 1 1345 198 50 31 chr10 10434769 10435127 -129881638 - MLT1A1 LTR MaLR 0 365 1 271 251 17 31 chr10 10436317 10436435 -129880330 - MIR SINE MIR -63 145 32 396 373 65 31 chr10 10436505 10436827 -129879938 - L2 LINE L2 -923 2391 2059 258 241 133 12 chr10 10436858 10436941 -129879824 + MER46C DNA MER2_type 28 120 -218 315 307 50 0 chr10 10436996 10437097 -129879668 - HERVL LTR ERVL -3202 2452 2347 942 258 72 32 chr10 10437385 10437852 -129878913 + MER39 LTR ERV1 8 707 0 1469 243 111 4 chr10 10439125 10439577 -129877188 - MER97a DNA MER1_type? -11 883 384 6286 171 58 13 chr10 10439579 10441956 -129874809 - L1MA7 LINE L1 -9 6282 3807 1082 263 66 24 chr10 10441959 10442340 -129874425 - MER97a DNA MER1_type? -497 397 1 216 0 0 0 chr10 10443475 10443499 -129873266 + (CA)n Simple_repeat Simple_repeat 2 25 0 638 108 0 10 chr10 10443500 10443602 -129873163 + (TA)n Simple_repeat Simple_repeat 1 101 0 622 299 23 87 chr10 10444526 10444961 -129871804 + L2 LINE L2 2907 3313 0 266 326 20 20 chr10 10445689 10445787 -129870978 + MIR SINE MIR 27 124 -84 24 32 0 0 chr10 10445952 10445983 -129870782 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 10446839 10446870 -129869895 + AT_rich Low_complexity Low_complexity 1 31 0 209 319 117 0 chr10 10447043 10447137 -129869628 + MIR3 SINE MIR 98 202 -6 1477 99 24 9 chr10 10447352 10447564 -129869201 - AluSp SINE Alu 0 313 99 1515 127 0 4 chr10 10448266 10448502 -129868263 - L1PB1 LINE L1 -1 6150 5916 856 136 39 7 chr10 10448503 10448559 -129868206 + L1PB1 LINE L1 5725 5778 -373 243 88 0 0 chr10 10448559 10448593 -129868172 + (TG)n Simple_repeat Simple_repeat 2 35 0 856 136 39 7 chr10 10448593 10448690 -129868075 + L1PB1 LINE L1 5778 5883 -268 3822 120 8 7 chr10 10449092 10449685 -129867080 + L1PA16 LINE L1 5571 6164 -2 2221 88 0 0 chr10 10450825 10451108 -129865657 - AluSx SINE Alu -19 293 11 1171 142 46 17 chr10 10451133 10451373 -129865392 - L1MA5A LINE L1 -6 6291 6045 339 133 67 78 chr10 10451410 10451500 -129865265 + MER103 DNA DNA 4 92 -74 270 193 0 0 chr10 10452127 10452184 -129864581 + (CA)n Simple_repeat Simple_repeat 2 58 0 243 114 0 0 chr10 10452549 10452593 -129864172 + (CTGTG)n Simple_repeat Simple_repeat 3 46 0 2181 111 3 23 chr10 10453354 10453661 -129863104 + AluSp SINE Alu 1 301 -12 3019 111 31 8 chr10 10453669 10454148 -129862617 - L1PA14 LINE L1 -2 6159 5670 1066 228 61 19 chr10 10455556 10455869 -129860896 + MLT1A2 LTR MaLR 6 424 -43 180 0 0 0 chr10 10455869 10455889 -129860876 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1971 134 7 0 chr10 10455889 10456166 -129860599 - AluSq SINE Alu -26 287 9 871 295 126 28 chr10 10456235 10456665 -129860100 - L2 LINE L2 -18 3295 2824 185 203 119 51 chr10 10456741 10456800 -129859965 - L2 LINE L2 -1061 2253 2191 1604 161 9 77 chr10 10457185 10457509 -129859256 + AluJo SINE Alu 1 302 -10 902 175 19 19 chr10 10458114 10458274 -129858491 - FRAM SINE Alu -17 159 1 263 267 80 0 chr10 10459315 10459390 -129857375 + MIR3 SINE MIR 105 185 -23 1821 159 36 32 chr10 10459489 10459797 -129856968 + AluJo SINE Alu 1 309 -3 416 237 44 18 chr10 10459804 10459918 -129856847 + MER5A DNA MER1_type 73 189 0 253 330 53 48 chr10 10463998 10464225 -129852540 - MIR SINE MIR 0 262 35 1875 156 0 0 chr10 10464822 10465105 -129851660 - AluSx SINE Alu -27 285 3 321 354 84 14 chr10 10465198 10465413 -129851352 + L2 LINE L2 2480 2709 -605 180 0 0 0 chr10 10465814 10465834 -129850931 + (TAA)n Simple_repeat Simple_repeat 1 20 0 258 314 12 0 chr10 10466464 10466550 -129850215 + MARNA DNA Mariner 408 494 -92 22 35 0 0 chr10 10467196 10467225 -129849540 + AT_rich Low_complexity Low_complexity 1 29 0 5176 179 20 18 chr10 10467230 10468526 -129848239 + L1MC2 LINE L1 5040 6333 -11 727 270 87 36 chr10 10469137 10469470 -129847295 - MLT1J1 LTR MaLR -31 415 66 26 0 0 0 chr10 10469608 10469634 -129847131 + AT_rich Low_complexity Low_complexity 1 26 0 423 0 0 0 chr10 10471057 10471104 -129845661 + (CA)n Simple_repeat Simple_repeat 2 48 0 2341 95 0 13 chr10 10471646 10471952 -129844813 - AluSp SINE Alu -11 302 1 25 0 0 0 chr10 10471960 10471985 -129844780 + AT_rich Low_complexity Low_complexity 1 25 0 327 145 0 16 chr10 10472274 10472336 -129844429 - MER51A LTR ERV1 -279 355 295 193 362 14 0 chr10 10472430 10472499 -129844266 - L2 LINE L2 -560 2754 2685 2229 167 41 5 chr10 10472563 10472976 -129843789 - MSTA LTR MaLR 0 428 1 1507 172 61 8 chr10 10473363 10473522 -129843243 - AluJo SINE Alu -23 289 109 387 0 0 0 chr10 10473522 10473565 -129843200 + (TG)n Simple_repeat Simple_repeat 2 44 0 1507 172 61 8 chr10 10473565 10473666 -129843099 - AluJo SINE Alu -203 109 15 334 278 0 52 chr10 10473902 10474017 -129842748 + MER5A DNA MER1_type 4 112 -77 29 47 0 0 chr10 10474273 10474316 -129842449 + AT_rich Low_complexity Low_complexity 1 43 0 405 311 38 0 chr10 10474397 10474503 -129842262 - MER91C DNA MER1_type 0 140 31 503 191 37 37 chr10 10476310 10476446 -129840319 - L1MA5A LINE L1 -3 6294 6159 40909 43 11 2 chr10 10476742 10482826 -129833939 - L1PA4 LINE L1 -3 6152 12 811 165 0 15 chr10 10482888 10483021 -129833744 - FLAM_C SINE Alu -2 131 1 690 200 0 0 chr10 10483666 10483786 -129832979 + FLAM_C SINE Alu 1 120 -13 2595 91 16 11 chr10 10484091 10484464 -129832301 + THE1C LTR MaLR 1 375 0 360 0 0 0 chr10 10484496 10484536 -129832229 + (TA)n Simple_repeat Simple_repeat 1 40 0 26 74 0 0 chr10 10485468 10485522 -129831243 + AT_rich Low_complexity Low_complexity 1 54 0 387 284 59 75 chr10 10486187 10486493 -129830272 - L3 LINE CR1 -30 1547 1247 351 316 45 8 chr10 10486499 10486632 -129830133 + MIR SINE MIR 53 190 -72 221 367 99 29 chr10 10486825 10487063 -129829702 - L2 LINE L2 -178 3094 2816 186 103 0 0 chr10 10487063 10487092 -129829673 + (TAA)n Simple_repeat Simple_repeat 1 29 0 221 367 99 29 chr10 10487092 10487211 -129829554 - L2 LINE L2 -456 2816 2707 233 271 41 41 chr10 10487344 10487466 -129829299 - MER94 DNA DNA -8 126 5 255 31 0 0 chr10 10487762 10487794 -129828971 + (TG)n Simple_repeat Simple_repeat 2 33 0 2285 109 3 0 chr10 10488414 10488726 -129828039 - AluSp SINE Alu 0 313 1 238 328 43 43 chr10 10489901 10490017 -129826748 + L2 LINE L2 3138 3253 -19 2293 153 25 35 chr10 10490206 10490407 -129826358 + MSTA LTR MaLR 1 202 -226 2516 58 0 3 chr10 10490407 10490719 -129826046 + AluY SINE Alu 1 311 0 2293 153 25 35 chr10 10490719 10490949 -129825816 + MSTA LTR MaLR 202 428 0 207 100 0 0 chr10 10491710 10491740 -129825025 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 37 39 0 0 chr10 10492446 10492497 -129824268 + AT_rich Low_complexity Low_complexity 1 51 0 2054 137 0 13 chr10 10492874 10493187 -129823578 - AluSc SINE Alu 0 309 1 2568 97 6 0 chr10 10493207 10493568 -129823197 - L1PB1 LINE L1 0 6151 5789 505 106 18 18 chr10 10493577 10493690 -129823075 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 2047 79 0 0 chr10 10493693 10493960 -129822805 - L1PB1 LINE L1 -360 5791 5525 28 0 0 0 chr10 10494415 10494443 -129822322 + AT_rich Low_complexity Low_complexity 1 28 0 1866 153 3 3 chr10 10494530 10494837 -129821928 - L1MC1 LINE L1 -11 6322 6016 3516 152 0 0 chr10 10494845 10495372 -129821393 - MER1A DNA MER1_type 0 527 1 723 206 12 0 chr10 10495377 10495542 -129821223 - L1MC1 LINE L1 -380 5953 5787 * 1138 236 46 18 chr10 10495541 10495825 -129820940 + L1M3e LINE L1 1238 1529 -5501 511 181 0 0 chr10 10495831 10495914 -129820851 + AluSg/x SINE Alu 205 287 -25 1910 112 33 4 chr10 10495925 10496201 -129820564 + AluSg SINE Alu 1 284 -26 24 32 0 0 chr10 10496201 10496232 -129820533 + AT_rich Low_complexity Low_complexity 1 31 0 3361 199 32 0 chr10 10496329 10497021 -129819744 - L1MCa LINE L1 -5619 807 94 2699 102 0 0 chr10 10497002 10497028 -129819737 + L1PA10 LINE L1 5574 5599 -569 * 1287 77 11 27 chr10 10497028 10497211 -129819554 - L1PA10 LINE L1 -7 6161 5982 2699 102 0 0 chr10 10497211 10497558 -129819207 + L1PA10 LINE L1 5598 5947 -221 388 230 35 0 chr10 10497555 10497642 -129819123 - L1MCa LINE L1 -6317 109 20 * 215 214 84 92 chr10 10498149 10498280 -129818485 - L2 LINE L2 -3 3310 3181 198 0 0 0 chr10 10499105 10499127 -129817638 + (A)n Simple_repeat Simple_repeat 1 22 0 1770 128 20 99 chr10 10499210 10499555 -129817210 + AluYb8 SINE Alu 1 318 0 183 231 39 0 chr10 10499657 10499709 -129817056 + L2 LINE L2 2933 2986 -327 194 0 0 37 chr10 10499785 10499812 -129816953 + (CAA)n Simple_repeat Simple_repeat 2 27 0 673 321 44 14 chr10 10499974 10500270 -129816495 - LTR16C LTR ERVL -181 310 6 524 255 39 114 chr10 10500925 10501054 -129815711 + MIR SINE MIR 13 115 -147 2319 119 0 0 chr10 10501054 10501366 -129815399 + AluSx SINE Alu 1 312 0 524 255 39 114 chr10 10501366 10501491 -129815274 + MIR SINE MIR 115 248 -14 193 254 0 48 chr10 10502910 10502973 -129813792 - MIR SINE MIR -31 231 172 30 0 0 0 chr10 10502984 10503014 -129813751 + AT_rich Low_complexity Low_complexity 1 30 0 494 292 91 40 chr10 10503440 10503769 -129812996 + MLT1I LTR MaLR 61 406 -3 21 0 0 0 chr10 10504871 10504892 -129811873 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10505783 10505804 -129810961 + AT_rich Low_complexity Low_complexity 1 21 0 666 246 78 0 chr10 10505809 10506093 -129810672 + L1M4 LINE L1 3139 3444 -2702 664 174 0 25 chr10 10506095 10506216 -129810549 + AluJb SINE Alu 81 198 -114 2831 255 64 35 chr10 10506226 10507300 -129809465 + L1M4 LINE L1 3468 4573 -1573 1648 235 143 75 chr10 10507286 10508172 -129808593 + L1MC3 LINE L1 4062 5008 -1138 * 1048 251 47 16 chr10 10508231 10508550 -129808215 - LTR52 LTR ERVL -92 329 1 4835 253 58 21 chr10 10508550 10509850 -129806915 - LTR52-int LTR ERVL 0 3556 2210 3544 239 65 19 chr10 10509916 10511168 -129805597 - LTR52-int LTR ERVL -1480 2098 794 198 0 0 0 chr10 10511224 10511246 -129805519 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2205 216 82 51 chr10 10511249 10511837 -129804928 - LTR52-int LTR ERVL -2940 616 11 1678 204 30 33 chr10 10511859 10512255 -129804510 - LTR52 LTR ERVL -26 395 1 950 229 30 0 chr10 10512255 10512521 -129804244 + L1MC3 LINE L1 5005 5278 -868 1773 214 5 5 chr10 10512550 10512929 -129803836 + L1MC3 LINE L1 5545 5923 -1862 1042 227 57 57 chr10 10512929 10513264 -129803501 + MER2 DNA MER2_type 1 335 -10 4660 181 38 56 chr10 10513282 10514379 -129802386 + L1MC3 LINE L1 5917 6994 -791 3380 5 0 0 chr10 10514429 10514809 -129801956 - L1PA2 LINE L1 0 6155 5776 5243 18 2 0 chr10 10514809 10515841 -129800924 + L1PA2 LINE L1 4772 5804 -351 1288 230 11 53 chr10 10515850 10516207 -129800558 + L1MC3 LINE L1 7139 7480 -305 407 320 19 19 chr10 10516446 10516602 -129800163 - L2 LINE L2 0 3313 3158 195 129 0 0 chr10 10516801 10516832 -129799933 + (CA)n Simple_repeat Simple_repeat 1 31 0 1861 226 34 18 chr10 10516861 10517362 -129799403 - MER90 LTR ERV1 -18 596 88 2139 96 4 4 chr10 10517872 10518198 -129798567 - AluSg1 SINE Alu 0 326 1 2229 107 0 29 chr10 10519168 10519477 -129797288 + AluSg SINE Alu 1 300 -10 195 308 0 77 chr10 10519802 10519880 -129796885 - MIR SINE MIR -121 141 70 5128 176 14 10 chr10 10521448 10523209 -129793556 - L1PA16 LINE L1 -9 6157 4392 324 291 50 14 chr10 10523823 10523964 -129792801 - L1ME1 LINE L1 -80 6086 5941 347 296 48 69 chr10 10524006 10524297 -129792468 - L1MEc LINE L1 -4579 1817 1533 35 0 0 0 chr10 10524328 10524363 -129792402 + AT_rich Low_complexity Low_complexity 1 35 0 865 295 55 25 chr10 10524671 10524974 -129791791 + L1MEc LINE L1 1973 2265 -3950 2178 114 7 0 chr10 10524974 10525271 -129791494 - AluSq SINE Alu -14 299 1 865 295 55 25 chr10 10525271 10525717 -129791048 + L1MEc LINE L1 2265 2717 -3498 250 311 104 43 chr10 10525718 10525882 -129790883 + MLT2E LTR ERVL 1 174 -454 1151 263 73 32 chr10 10526077 10526514 -129790251 + LTR16A1 LTR ERVL 3 457 0 523 336 18 5 chr10 10526838 10527055 -129789710 + ERVL LTR ERVL 316 535 -5229 724 343 58 48 chr10 10527194 10527923 -129788842 + ERVL LTR ERVL 843 1578 -4186 2023 82 19 0 chr10 10528450 10528718 -129788047 - MER4E LTR ERV1 -28 738 466 509 266 10 68 chr10 10528721 10528913 -129787852 + ERVL LTR ERVL 1763 1943 -3711 782 308 5 5 chr10 10528969 10529190 -129787575 + ERVL LTR ERVL 2121 2341 -3423 * 2508 300 73 15 chr10 10529183 10530160 -129786605 + ERVL LTR ERVL 2506 3538 -2226 804 309 42 51 chr10 10530285 10530758 -129786007 - HERV16 LTR ERVL -2207 2789 2321 1495 233 149 10 chr10 10530813 10531221 -129785544 - MLT2B2 LTR ERVL -50 465 1 366 23 0 0 chr10 10532190 10532233 -129784532 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1963 129 4 0 chr10 10532235 10532513 -129784252 - AluY SINE Alu -32 279 1 522 324 89 37 chr10 10532637 10532986 -129783779 - LTR16B LTR ERVL 0 464 98 2504 112 3 6 chr10 10533024 10533380 -129783385 - THE1A LTR MaLR 0 355 1 333 286 56 48 chr10 10533430 10533661 -129783104 + L1ME LINE L1 5550 5782 -388 1100 243 36 49 chr10 10533661 10533815 -129782950 - MLT1D LTR MaLR 0 505 351 1799 130 0 65 chr10 10533815 10534122 -129782643 - AluSx SINE Alu -14 298 12 1100 243 36 49 chr10 10534122 10534296 -129782469 - MLT1D LTR MaLR -154 351 181 1661 192 0 7 chr10 10534319 10534606 -129782159 + AluJo SINE Alu 7 291 -21 216 0 0 0 chr10 10535195 10535219 -129781546 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2167 125 0 0 chr10 10535310 10535607 -129781158 + AluSx SINE Alu 1 297 -15 856 163 6 67 chr10 10536130 10536308 -129780457 + FRAM SINE Alu 2 168 -8 248 303 91 57 chr10 10536795 10536970 -129779795 + L3b LINE CR1 1205 1385 -198 2142 136 3 0 chr10 10537320 10537630 -129779135 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 10537986 10538007 -129778758 + AT_rich Low_complexity Low_complexity 1 21 0 412 338 40 45 chr10 10538796 10538994 -129777771 - MIR SINE MIR -41 221 25 255 204 0 0 chr10 10539203 10539257 -129777508 + (TATG)n Simple_repeat Simple_repeat 4 57 0 453 213 0 0 chr10 10539866 10539946 -129776819 + Tigger5 DNA MER2_type 2237 2316 -7 303 28 0 0 chr10 10541222 10541258 -129775507 + (TG)n Simple_repeat Simple_repeat 1 36 0 210 317 96 0 chr10 10541962 10542066 -129774699 + MIR SINE MIR 148 261 -1 2276 97 0 7 chr10 10543612 10543912 -129772853 - AluSg SINE Alu -12 298 1 245 233 0 0 chr10 10544074 10544117 -129772648 + (TG)n Simple_repeat Simple_repeat 1 43 0 1137 280 59 8 chr10 10544155 10544665 -129772100 + L1M1 LINE L1 2665 3263 -4483 254 279 0 0 chr10 10544690 10544758 -129772007 + Tigger5 DNA MER2_type 2251 2318 -5 316 265 0 0 chr10 10544780 10544848 -129771917 - Tigger5 DNA MER2_type -2235 88 21 889 115 0 0 chr10 10544850 10544980 -129771785 + AluSg/x SINE Alu 181 310 0 474 191 36 0 chr10 10545020 10545104 -129771661 + Tigger5 DNA MER2_type 2237 2323 0 4737 262 40 41 chr10 10545112 10547705 -129769060 + L1MEc LINE L1 1919 4462 -1753 670 264 124 28 chr10 10547826 10548182 -129768583 + L1MEc LINE L1 4423 4812 -1403 1554 301 110 26 chr10 10548189 10548871 -129767894 + L2 LINE L2 1876 2614 -700 231 342 37 25 chr10 10549210 10549371 -129767394 - LTR16C LTR ERVL -3 488 326 237 342 45 0 chr10 10549745 10549856 -129766909 - L1M4 LINE L1 -1293 4853 4738 297 308 97 34 chr10 10550081 10550617 -129766148 - L1M4 LINE L1 -1745 4401 3832 401 79 0 0 chr10 10550793 10550856 -129765909 - L1PB1 LINE L1 0 6151 6089 358 311 61 30 chr10 10550877 10551272 -129765493 - L1MEd LINE L1 -5031 1088 682 543 293 68 24 chr10 10552417 10552666 -129764099 + LTR16B LTR ERVL 116 375 -89 321 368 8 8 chr10 10552954 10553087 -129763678 - MIR SINE MIR -118 144 12 492 260 114 49 chr10 10553971 10554279 -129762486 - MLT1J LTR MaLR -173 338 11 282 356 48 39 chr10 10554293 10554501 -129762264 + L3 LINE CR1 1367 1576 -1 236 293 98 83 chr10 10554554 10554687 -129762078 + L2 LINE L2 3138 3272 0 222 207 0 0 chr10 10555214 10555272 -129761493 + CT-rich Low_complexity Low_complexity 1 58 0 233 182 30 0 chr10 10555272 10555338 -129761427 + (CA)n Simple_repeat Simple_repeat 2 69 0 208 206 0 29 chr10 10555339 10555407 -129761358 + CT-rich Low_complexity Low_complexity 2 67 0 2140 121 0 0 chr10 10555584 10555900 -129760865 + AluSg SINE Alu 1 316 0 323 347 57 0 chr10 10556773 10556897 -129759868 + MIR3 SINE MIR 62 192 -16 2176 121 7 0 chr10 10558376 10558674 -129758091 - AluSx SINE Alu -12 300 1 1812 174 3 25 chr10 10559773 10560121 -129756644 - AluJo SINE Alu 0 341 1 582 334 71 56 chr10 10560663 10561057 -129755708 + L1M4 LINE L1 4281 4667 -1479 1939 137 4 0 chr10 10561057 10561335 -129755430 + AluSx SINE Alu 31 309 -3 582 334 71 56 chr10 10561335 10561870 -129754895 + L1M4 LINE L1 4667 5241 -905 1601 208 7 10 chr10 10562033 10562336 -129754429 + AluJb SINE Alu 1 302 -10 1399 258 136 20 chr10 10562943 10563284 -129753481 + L1M4 LINE L1 3181 3481 -2665 2307 108 0 0 chr10 10563284 10563591 -129753174 + AluSx SINE Alu 1 307 -5 1399 258 136 20 chr10 10563591 10563771 -129752994 + L1M4 LINE L1 3481 3639 -2507 333 47 0 0 chr10 10563771 10563814 -129752951 + (CA)n Simple_repeat Simple_repeat 2 44 0 1399 258 136 20 chr10 10563814 10563990 -129752775 + L1M4 LINE L1 3639 3960 -2186 590 290 37 71 chr10 10564232 10564352 -129752413 - MIR SINE MIR -1 261 139 2031 128 0 14 chr10 10564352 10564674 -129752091 - AluSq SINE Alu 0 318 1 590 290 37 71 chr10 10564674 10564821 -129751944 - MIR SINE MIR -123 139 2 1196 124 0 11 chr10 10565170 10565347 -129751418 - FRAM SINE Alu -3 173 1 23 68 0 0 chr10 10565803 10565847 -129750918 + AT_rich Low_complexity Low_complexity 1 44 0 1272 247 83 20 chr10 10566762 10567159 -129749606 + L1MCa LINE L1 23 444 -5982 444 138 88 0 chr10 10567189 10567269 -129749496 + L1MC2 LINE L1 6247 6333 -11 1894 166 33 28 chr10 10567563 10567925 -129748840 - THE1B LTR MaLR 0 364 1 1584 259 86 49 chr10 10568015 10568828 -129747937 - L1ME3A LINE L1 -11 6970 6128 203 61 30 0 chr10 10569159 10569192 -129747573 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 182 36 0 36 chr10 10569235 10569263 -129747502 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1108 292 51 47 chr10 10569673 10570133 -129746632 - L1ME3A LINE L1 -864 6093 5627 2395 74 0 3 chr10 10570133 10570432 -129746333 - AluY SINE Alu -13 298 1 1108 292 51 47 chr10 10570432 10570776 -129745989 - L1ME3A LINE L1 -1330 5627 5286 360 152 15 0 chr10 10570830 10570896 -129745869 - LTR41 LTR ERVL -5 768 702 329 253 0 50 chr10 10570902 10571001 -129745764 - L1MC4 LINE L1 -1339 6703 6610 328 262 16 145 chr10 10571011 10571328 -129745437 - LTR41 LTR ERVL -60 713 438 341 245 82 10 chr10 10571652 10571750 -129745015 - LTR41 LTR ERVL -586 187 83 985 276 95 25 chr10 10571780 10572370 -129744395 - L1ME3A LINE L1 -1853 5104 4474 778 288 21 16 chr10 10572550 10572793 -129743972 + LTR16B LTR ERVL 221 464 0 974 268 76 83 chr10 10572841 10573610 -129743155 - L1M4b LINE L1 -2606 4351 3578 2118 134 0 0 chr10 10573610 10573916 -129742849 - AluSg SINE Alu -4 306 1 974 268 76 83 chr10 10573916 10574777 -129741988 - L1M4b LINE L1 -3379 3578 2770 651 24 0 0 chr10 10574941 10575026 -129741739 - L1PA4 LINE L1 -142 6013 5929 398 344 125 14 chr10 10575052 10575407 -129741358 - L1M4b LINE L1 -5050 1910 1419 791 334 53 3 chr10 10575432 10575789 -129740976 + MLT1G1 LTR MaLR 1 419 -176 313 277 10 20 chr10 10575827 10575928 -129740837 + MLT1G1 LTR MaLR 496 595 0 1982 153 122 13 chr10 10576385 10576771 -129739994 + MSTA LTR MaLR 1 428 0 2010 173 20 3 chr10 10576803 10577161 -129739604 + MLT1A1 LTR MaLR 1 364 -1 301 305 74 0 chr10 10577417 10577512 -129739253 - MIR SINE MIR -158 104 3 788 256 19 10 chr10 10580521 10580728 -129736037 - MLT1A1 LTR MaLR 0 365 157 654 120 0 10 chr10 10580742 10580842 -129735923 - AluYb8 SINE Alu -16 302 204 758 117 51 15 chr10 10580848 10580985 -129735780 - MLT1A1 LTR MaLR -215 150 9 184 259 47 71 chr10 10581388 10581473 -129735292 + L2 LINE L2 3189 3271 -1 2047 143 39 22 chr10 10583028 10583386 -129733379 - THE1B LTR MaLR 0 364 1 1500 249 96 42 chr10 10583953 10584504 -129732261 + L1MC4 LINE L1 6460 7040 -1002 1273 282 82 27 chr10 10584528 10584747 -129732018 + L1MC4 LINE L1 7232 7438 -604 443 99 0 121 chr10 10584747 10584784 -129731981 + MADE1 DNA Mariner 1 22 -58 2307 106 0 0 chr10 10584784 10585076 -129731689 - AluSc SINE Alu -14 295 4 443 99 0 121 chr10 10585076 10585129 -129731636 + MADE1 DNA Mariner 22 80 0 1273 282 82 27 chr10 10585129 10585498 -129731267 + L1MC4 LINE L1 7438 7852 -190 24 0 0 0 chr10 10586115 10586139 -129730626 + AT_rich Low_complexity Low_complexity 1 24 0 817 253 39 0 chr10 10586298 10586480 -129730285 - MER5A DNA MER1_type 0 189 1 4134 179 65 23 chr10 10587373 10588147 -129728618 - L1MA7 LINE L1 0 6291 5551 2113 129 7 0 chr10 10588147 10588442 -129728323 - AluSp SINE Alu -16 297 1 4134 179 65 23 chr10 10588442 10589408 -129727357 - L1MA7 LINE L1 -740 5551 4478 1517 207 24 6 chr10 10589439 10589777 -129726988 + L1 LINE L1 3850 4193 -1953 1366 164 105 4 chr10 10589779 10590017 -129726748 + AluJb SINE Alu 2 263 -49 396 0 0 0 chr10 10590045 10590089 -129726676 + (CA)n Simple_repeat Simple_repeat 1 44 0 440 193 11 0 chr10 10590098 10590186 -129726579 + MLT1A2 LTR MaLR 269 357 -17 347 349 155 9 chr10 10590530 10590762 -129726003 - L1MEc LINE L1 -6094 302 37 358 296 26 40 chr10 10591009 10591161 -129725604 - HAL1b LINE L1 -857 491 342 644 111 0 0 chr10 10591937 10592036 -129724729 + AluSg/x SINE Alu 207 305 -7 4001 167 11 10 chr10 10592191 10592524 -129724241 - L1PA16 LINE L1 -9 6157 5826 2296 111 0 13 chr10 10592524 10592840 -129723925 - AluSx SINE Alu 0 312 1 4001 167 11 10 chr10 10592840 10593229 -129723536 - L1PA16 LINE L1 -340 5826 5434 22 0 0 0 chr10 10593275 10593297 -129723468 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 10593927 10593959 -129722806 + AT_rich Low_complexity Low_complexity 1 32 0 605 234 9 7 chr10 10594124 10594362 -129722403 - LTR16B LTR ERVL -175 289 1 226 336 88 26 chr10 10594374 10594487 -129722278 - MIR SINE MIR -117 145 26 195 42 0 0 chr10 10594490 10594514 -129722251 + (TAGG)n Simple_repeat Simple_repeat 2 25 0 400 281 102 18 chr10 10595145 10595312 -129721453 - MLT1J2 LTR MaLR -267 183 3 2344 82 7 0 chr10 10595467 10595770 -129720995 - AluSp SINE Alu -8 305 1 328 358 22 7 chr10 10596031 10596168 -129720597 + MIR3 SINE MIR 7 145 -63 990 288 75 7 chr10 10597195 10597584 -129719181 - MLT1J1 LTR MaLR 0 446 38 330 351 53 11 chr10 10597674 10597862 -129718903 - MIR SINE MIR -66 196 1 195 324 68 0 chr10 10598651 10598725 -129718040 + MIR SINE MIR 65 143 -65 264 289 87 19 chr10 10598839 10598943 -129717822 - MIR SINE MIR -65 143 33 204 83 62 0 chr10 10599394 10599442 -129717323 + (TA)n Simple_repeat Simple_repeat 2 52 0 1709 208 32 5 chr10 10600014 10600394 -129716371 + MLT1B LTR MaLR 1 390 0 570 326 16 40 chr10 10601259 10601442 -129715323 + MLT1I LTR MaLR 75 250 -159 1580 211 18 101 chr10 10601442 10601988 -129714777 - MLT1D LTR MaLR -4 501 1 570 326 16 40 chr10 10601988 10602108 -129714657 + MLT1I LTR MaLR 250 371 -38 253 333 44 11 chr10 10602278 10602461 -129714304 - L1ME LINE L1 -409 5712 5524 2103 135 0 0 chr10 10604312 10604609 -129712156 + AluSc SINE Alu 1 297 -12 1672 186 0 11 chr10 10605691 10605971 -129710794 + AluJb SINE Alu 5 281 -31 2147 113 7 13 chr10 10606864 10607145 -129709620 + AluSg SINE Alu 1 282 -28 240 35 0 0 chr10 10607145 10607174 -129709591 + (TC)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr10 10607173 10607195 -129709570 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 2147 113 7 13 chr10 10607174 10607215 -129709550 + AluSg SINE Alu 282 300 -10 24 0 0 0 chr10 10607512 10607536 -129709229 + AT_rich Low_complexity Low_complexity 1 24 0 982 289 88 13 chr10 10607553 10608009 -129708756 - LTR33 LTR ERVL -9 512 23 185 346 74 19 chr10 10609354 10609516 -129707249 - L2 LINE L2 -10 3303 3133 565 278 40 28 chr10 10611995 10612171 -129704594 + MER45A DNA AcHobo 1 178 0 486 294 81 57 chr10 10613404 10613652 -129703113 - MIR SINE MIR 0 262 9 461 356 76 20 chr10 10613732 10614035 -129702730 + MLT1I LTR MaLR 73 392 -17 329 353 112 0 chr10 10614233 10614349 -129702416 + MIR SINE MIR 17 145 -63 2027 240 42 13 chr10 10614406 10615105 -129701660 + L1MC3 LINE L1 4578 5296 -850 * 2385 220 37 22 chr10 10615103 10615786 -129700979 + L1MB2 LINE L1 4133 4825 -1321 866 197 0 0 chr10 10615786 10615933 -129700832 + AluSg/x SINE Alu 159 305 -7 742 206 18 6 chr10 10615935 10616105 -129700660 + L1MB2 LINE L1 4819 4990 -1156 326 263 8 17 chr10 10616115 10616233 -129700532 - L1MA9 LINE L1 -157 6155 6039 3832 176 37 53 chr10 10616285 10617489 -129699276 + L1MB2 LINE L1 4980 6171 0 * 5783 195 42 61 chr10 10617485 10618082 -129698683 + L1MC3 LINE L1 5283 5890 -1895 2427 72 0 3 chr10 10618082 10618386 -129698379 - AluY SINE Alu -8 303 1 5783 195 42 61 chr10 10618386 10619463 -129697302 + L1MC3 LINE L1 5890 6925 -860 326 220 11 22 chr10 10619476 10619529 -129697236 + L1MC4a LINE L1 6779 6832 -976 315 104 0 0 chr10 10619529 10619577 -129697188 + (CA)n Simple_repeat Simple_repeat 1 48 0 326 220 11 22 chr10 10619577 10619614 -129697151 + L1MC4a LINE L1 6832 6868 -940 900 236 81 3 chr10 10619824 10619951 -129696814 + MER33 DNA MER1_type 1 117 -2468 2113 142 3 3 chr10 10619951 10620260 -129696505 + AluSq SINE Alu 1 309 -4 900 236 81 3 chr10 10620260 10620429 -129696336 + MER33 DNA MER1_type 117 320 -4 2667 178 26 72 chr10 10620744 10621385 -129695380 - LTR9 LTR ERV1 0 612 1 254 276 42 11 chr10 10621676 10621815 -129694950 + MLT1J LTR MaLR 446 511 0 222 349 54 49 chr10 10622392 10622694 -129694071 - L2 LINE L2 -14 3258 2894 1960 171 20 15 chr10 10623070 10623479 -129693286 - L1MC1 LINE L1 -1 6332 5922 234 284 42 30 chr10 10623558 10623734 -129693031 - MLT1J1 LTR MaLR -10 436 263 309 51 0 0 chr10 10624077 10624116 -129692649 + (TG)n Simple_repeat Simple_repeat 2 40 0 1845 145 0 4 chr10 10624116 10624378 -129692387 - AluSx SINE Alu -28 284 24 229 272 49 37 chr10 10624381 10624462 -129692303 - L2 LINE L2 0 3272 3191 22 0 0 0 chr10 10625942 10625964 -129690801 + AT_rich Low_complexity Low_complexity 1 22 0 467 315 59 33 chr10 10626140 10626530 -129690235 + L1M4 LINE L1 2304 2703 -3443 734 199 126 16 chr10 10626804 10626995 -129689770 + MLT1A2 LTR MaLR 1 212 -162 1000 140 0 7 chr10 10627114 10627257 -129689508 - AluJb SINE Alu -170 142 1 26 0 0 0 chr10 10627262 10627288 -129689477 + AT_rich Low_complexity Low_complexity 1 26 0 714 118 17 42 chr10 10628364 10628483 -129688282 + AluJb SINE Alu 34 149 -163 3854 179 78 31 chr10 10628535 10629321 -129687444 + L1MCa LINE L1 20 768 -5658 1488 161 158 60 chr10 10629321 10629707 -129687058 - MSTB LTR MaLR -2 424 1 3854 179 78 31 chr10 10629707 10629836 -129686929 + L1MCa LINE L1 768 982 -5444 3949 94 11 4 chr10 10629836 10630386 -129686379 - MER41A LTR ERV1 0 554 1 3854 179 78 31 chr10 10630386 10630408 -129686357 + L1MCa LINE L1 982 1002 -5424 336 48 0 0 chr10 10631337 10631379 -129685386 + (TG)n Simple_repeat Simple_repeat 2 43 0 253 239 145 22 chr10 10631950 10632088 -129684677 + MER104 DNA Tc2 22 176 -4 29 0 0 25 chr10 10632963 10632975 -129683790 + AT_rich Low_complexity Low_complexity 1 12 -27 1828 47 0 4 chr10 10632975 10633209 -129683556 + L1PA4 LINE L1 5920 6152 -3 29 0 0 25 chr10 10633209 10633236 -129683529 + AT_rich Low_complexity Low_complexity 12 39 0 1629 110 9 0 chr10 10633379 10633598 -129683167 - AluSx SINE Alu -91 221 1 1845 147 20 124 chr10 10634335 10634659 -129682106 - MER7C DNA MER2_type -2607 421 154 3166 151 47 0 chr10 10634659 10635216 -129681549 - L1PB3 LINE L1 -6 6148 5566 1845 147 20 124 chr10 10635216 10635333 -129681432 - MER7C DNA MER2_type -2874 154 26 2380 77 3 0 chr10 10635783 10636112 -129680653 + AluY SINE Alu 10 311 0 1655 177 108 0 chr10 10636433 10636777 -129679988 + MSTA LTR MaLR 2 382 -46 1025 214 5 0 chr10 10636830 10637036 -129679729 + Tigger3(Golem) DNA MER2_type 46 252 -2777 230 135 0 0 chr10 10637062 10637099 -129679666 + MSTA LTR MaLR 390 426 -2 26 30 0 0 chr10 10637462 10637495 -129679270 + AT_rich Low_complexity Low_complexity 1 33 0 297 263 91 0 chr10 10639151 10639250 -129677515 + MER20B DNA MER1_type 63 170 -613 22 0 0 0 chr10 10639377 10639399 -129677366 + AT_rich Low_complexity Low_complexity 1 22 0 4705 62 6 4 chr10 10639422 10640112 -129676653 + L1PA7 LINE L1 5213 5904 -250 950 130 56 0 chr10 10640112 10640273 -129676492 - LTR12 LTR ERV1 0 714 545 7331 114 18 22 chr10 10640286 10642371 -129674394 - HERV9 LTR ERV1 -6180 2219 59 732 122 47 74 chr10 10642350 10642498 -129674267 - pTR5 LTR ERV1 -1994 444 301 * 321 263 10 0 chr10 10642498 10642597 -129674168 - LTR30 LTR ERV1 -79 643 544 1370 103 205 6 chr10 10642597 10642966 -129673799 - LTR12 LTR ERV1 -417 2021 57 247 196 0 0 chr10 10642966 10643017 -129673748 - LTR30 LTR ERV1 -670 52 2 1754 106 0 4 chr10 10643018 10643272 -129673493 + L1PA7 LINE L1 5901 6153 -1 440 206 7 0 chr10 10645239 10645375 -129671390 + (TG)n Simple_repeat Simple_repeat 2 138 0 535 196 12 0 chr10 10645397 10645570 -129671195 + (TG)n Simple_repeat Simple_repeat 2 176 0 481 187 47 33 chr10 10645744 10645894 -129670871 + L1MC3 LINE L1 6987 7138 -647 300 73 0 0 chr10 10645895 10645936 -129670829 - 5S rRNA rRNA -79 42 2 237 122 0 0 chr10 10645951 10645992 -129670773 - 5S rRNA rRNA -79 42 2 2657 188 18 4 chr10 10645994 10646538 -129670227 + L1MC3 LINE L1 7127 7678 -107 1584 139 157 80 chr10 10646539 10646914 -129669851 - MER4A LTR ERV1 0 664 261 517 109 33 11 chr10 10646914 10647006 -129669759 - MER4A LTR ERV1 -566 98 5 402 202 0 0 chr10 10647011 10647095 -129669670 + L1MC3 LINE L1 7676 7759 -26 282 337 107 16 chr10 10648225 10648412 -129668353 + MIR SINE MIR 32 235 -27 28 29 0 0 chr10 10648711 10648746 -129668019 + AT_rich Low_complexity Low_complexity 1 35 0 424 256 71 59 chr10 10649009 10649247 -129667518 - Charlie2a DNA MER1_type -1895 967 727 474 358 42 26 chr10 10649545 10649931 -129666834 - ERVL LTR ERVL -3556 2208 1817 482 339 36 39 chr10 10649932 10650345 -129666420 - ERVL LTR ERVL -4348 1416 1005 24 32 0 0 chr10 10652481 10652512 -129664253 + AT_rich Low_complexity Low_complexity 1 31 0 460 283 28 90 chr10 10653098 10653275 -129663490 - MIR SINE MIR -38 224 59 310 332 126 5 chr10 10653480 10653670 -129663095 - MIR SINE MIR -49 213 1 1365 229 8 24 chr10 10654289 10654661 -129662104 - MLT1A2 LTR MaLR 0 374 9 234 286 29 0 chr10 10654661 10654766 -129661999 + (TA)n Simple_repeat Simple_repeat 2 109 0 1744 132 70 59 chr10 10655828 10655895 -129660870 - THE1C LTR MaLR 0 375 310 2020 133 0 0 chr10 10655895 10656212 -129660553 - AluSc SINE Alu 0 317 1 1744 132 70 59 chr10 10656212 10656514 -129660251 - THE1C LTR MaLR -65 310 1 282 293 50 45 chr10 10657064 10657423 -129659342 + L1MEd LINE L1 893 1253 -4866 180 0 0 0 chr10 10657459 10657479 -129659286 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 310 208 0 0 chr10 10657488 10657560 -129659205 - FLAM SINE Alu -22 111 40 377 312 50 47 chr10 10657822 10658507 -129658258 - L1M4 LINE L1 -2373 3773 3087 854 243 83 71 chr10 10660921 10661026 -129655739 + ERVL LTR ERVL 4117 4219 -1545 2320 98 0 20 chr10 10661026 10661331 -129655434 + AluSq SINE Alu 1 299 -14 854 243 83 71 chr10 10661331 10661632 -129655133 + ERVL LTR ERVL 4219 4528 -1236 382 241 103 0 chr10 10661636 10661752 -129655013 - MLT1H1 LTR MaLR -11 544 417 868 360 115 26 chr10 10662139 10663044 -129653721 - L2 LINE L2 -337 2977 1993 1178 259 123 7 chr10 10663165 10663579 -129653186 - LTR40b LTR ERVL 0 462 1 220 179 0 0 chr10 10663932 10663971 -129652794 + MIR SINE MIR 12 50 -212 265 271 66 8 chr10 10664243 10664365 -129652400 + L1M3 LINE L1 5434 5562 -618 226 241 86 9 chr10 10666392 10666508 -129650257 + LTR16C LTR ERVL 367 491 0 22 70 0 0 chr10 10666536 10666579 -129650186 + AT_rich Low_complexity Low_complexity 1 43 0 180 262 0 0 chr10 10668256 10668298 -129648467 + L2 LINE L2 3241 3282 -31 23 0 0 0 chr10 10668575 10668598 -129648167 + AT_rich Low_complexity Low_complexity 1 23 0 1706 169 27 32 chr10 10669308 10669680 -129647085 - L1MA3 LINE L1 -10 6295 5926 368 340 0 35 chr10 10669786 10669930 -129646835 - MIR SINE MIR -121 141 3 317 102 0 0 chr10 10669955 10670004 -129646761 - MLT2B1 LTR ERVL 0 520 472 180 146 67 0 chr10 10670013 10670102 -129646663 + (TA)n Simple_repeat Simple_repeat 2 96 0 403 276 8 16 chr10 10670124 10670251 -129646514 - MLT2B1 LTR ERVL -52 468 343 2566 186 19 25 chr10 10670334 10670515 -129646250 + MER41E LTR ERV1 1 182 -330 2830 99 0 3 chr10 10670515 10670890 -129645875 + THE1C LTR MaLR 1 374 -1 2566 186 19 25 chr10 10670890 10671223 -129645542 + MER41E LTR ERV1 182 512 0 1179 198 3 73 chr10 10671226 10671540 -129645225 - MLT2B1 LTR ERVL -228 292 1 2082 133 10 3 chr10 10671799 10672100 -129644665 + AluSc SINE Alu 1 303 -6 549 333 15 5 chr10 10672351 10672552 -129644213 + MIR SINE MIR 3 205 -57 213 39 0 0 chr10 10672951 10672977 -129643788 + (A)n Simple_repeat Simple_repeat 1 26 0 952 204 48 109 chr10 10674330 10674707 -129642058 - LTR26B LTR ERV1 -177 354 1 21 36 0 0 chr10 10675998 10676026 -129640739 + AT_rich Low_complexity Low_complexity 1 28 0 190 268 12 85 chr10 10676237 10676319 -129640446 + MIR SINE MIR 110 185 -77 466 321 160 5 chr10 10677077 10677289 -129639476 - MIR SINE MIR -16 246 2 1902 143 7 0 chr10 10677400 10677680 -129639085 + AluSx SINE Alu 31 312 0 311 318 195 36 chr10 10678430 10678877 -129637888 - L3 LINE CR1 -422 1155 638 427 314 117 24 chr10 10678950 10679240 -129637525 - L1MEc LINE L1 -4131 2265 1949 23 0 0 0 chr10 10679310 10679333 -129637432 + AT_rich Low_complexity Low_complexity 1 23 0 420 312 49 56 chr10 10679750 10680141 -129636624 - L1MEc LINE L1 -5591 614 227 182 37 37 0 chr10 10681180 10681207 -129635558 + (TA)n Simple_repeat Simple_repeat 1 28 0 227 169 0 34 chr10 10681217 10681276 -129635489 - L1MC4 LINE L1 -1338 6704 6648 330 243 118 66 chr10 10681788 10681940 -129634825 + MIR SINE MIR 30 189 -73 368 308 122 52 chr10 10682531 10682703 -129634062 - MIR SINE MIR -49 213 30 1836 131 0 0 chr10 10683862 10684114 -129632651 + AluSg SINE Alu 43 294 -16 1391 182 11 12 chr10 10685104 10685659 -129631106 + MER6A DNA MER2_type 1 604 -1 189 0 0 0 chr10 10686972 10686993 -129629772 + (A)n Simple_repeat Simple_repeat 1 21 0 282 259 26 129 chr10 10739446 10739562 -129577203 + MER5A DNA MER1_type 10 113 -76 208 240 21 94 chr10 10740109 10740205 -129576560 + MIR SINE MIR 104 192 -70 1795 159 0 7 chr10 10741571 10741888 -129574877 - AluSx SINE Alu 0 315 1 2234 109 0 0 chr10 10742514 10742818 -129573947 - AluSq SINE Alu -9 304 1 1945 52 4 0 chr10 10742940 10743220 -129573545 - AluY SINE Alu 0 333 53 577 120 0 0 chr10 10744219 10744294 -129572471 + AluSg/x SINE Alu 217 291 -21 231 254 18 0 chr10 10744397 10744452 -129572313 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 * 1564 176 42 11 chr10 10744424 10744792 -129571973 - MLT2C2 LTR ERVL -20 444 5 488 357 22 32 chr10 10744898 10745301 -129571464 - ERVL LTR ERVL -3842 1922 1524 857 196 6 11 chr10 10746202 10746381 -129570384 + MER5B DNA MER1_type 1 178 0 681 224 86 11 chr10 10746389 10746563 -129570202 - MER5A DNA MER1_type -1 188 2 2068 147 33 25 chr10 10747162 10747523 -129569242 - THE1B LTR MaLR 0 364 1 354 45 0 0 chr10 10747665 10747709 -129569056 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1601 252 73 8 chr10 10747941 10748421 -129568344 + LTR40a LTR ERVL 1 511 -8 357 344 18 27 chr10 10748424 10748645 -129568120 + L1MC4a LINE L1 5664 5882 -1926 736 288 63 34 chr10 10748868 10749250 -129567515 + MLT1J LTR MaLR 75 467 -44 662 284 62 27 chr10 10750285 10750623 -129566142 + MLT1C LTR MaLR 118 467 0 268 254 84 0 chr10 10750623 10750694 -129566071 - MIR SINE MIR -81 181 105 242 329 0 0 chr10 10751690 10751769 -129564996 - MIR SINE MIR -10 252 174 817 246 83 49 chr10 10751779 10752226 -129564539 + MLT1C LTR MaLR 6 467 0 533 268 37 37 chr10 10752226 10752390 -129564375 - MIR SINE MIR -92 170 7 1125 211 132 6 chr10 10753143 10753442 -129563323 + MER63B DNA MER1_type 1 261 -801 5057 91 21 101 chr10 10753442 10753843 -129562922 - L1MA2 LINE L1 0 6304 5872 2132 141 0 0 chr10 10753843 10754142 -129562623 - AluSx SINE Alu -13 299 1 5057 91 21 101 chr10 10754142 10754668 -129562097 - L1MA2 LINE L1 -432 5872 5454 2127 126 19 10 chr10 10754668 10754978 -129561787 - AluSq SINE Alu 0 313 1 5057 91 21 101 chr10 10754978 10755006 -129561759 - L1MA2 LINE L1 -850 5454 5425 1125 211 132 6 chr10 10755006 10755048 -129561717 + MER63B DNA MER1_type 261 385 -51 303 125 0 150 chr10 10755675 10755719 -129561046 - MER73 LTR ERVL 0 644 616 2372 82 0 3 chr10 10755719 10756023 -129560742 - AluSx SINE Alu -9 303 1 303 125 0 150 chr10 10756023 10756058 -129560707 - MER73 LTR ERVL -28 616 577 1432 205 121 3 chr10 10756158 10756548 -129560217 - MER73 LTR ERVL -208 436 1 214 361 89 24 chr10 10756881 10757050 -129559715 - L2 LINE L2 -4 3268 3089 2161 125 3 0 chr10 10757168 10757471 -129559294 - AluSp SINE Alu -9 304 1 288 299 60 54 chr10 10757475 10757642 -129559123 - L2 LINE L2 -597 2717 2550 370 275 81 23 chr10 10757928 10758127 -129558638 + LTR16B LTR ERVL 266 450 0 453 217 70 26 chr10 10758679 10758794 -129557971 + MIR SINE MIR 106 225 -37 399 216 0 0 chr10 10758863 10758974 -129557791 + GA-rich Low_complexity Low_complexity 1 111 0 2460 190 91 12 chr10 10759278 10759841 -129556924 + MER21B LTR ERV1 1 607 -256 1397 210 7 3 chr10 10759954 10760244 -129556521 + MER21B LTR ERV1 572 862 -1 3946 32 2 0 chr10 10760249 10760722 -129556043 + L1PA4 LINE L1 5681 6154 -1 1142 89 0 0 chr10 10760790 10760936 -129555829 - AluSg/x SINE Alu -6 306 161 287 278 62 10 chr10 10762004 10762101 -129554664 - L3 LINE CR1 -94 1483 1382 789 216 13 0 chr10 10762202 10762355 -129554410 + FRAM SINE Alu 1 155 -11 206 62 31 0 chr10 10764143 10764175 -129552590 + (GA)n Simple_repeat Simple_repeat 2 34 0 1535 209 31 14 chr10 10764893 10765252 -129551513 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr10 10765741 10765762 -129551003 + AT_rich Low_complexity Low_complexity 1 21 0 2200 129 3 0 chr10 10765810 10766113 -129550652 - AluSx SINE Alu -8 304 1 329 307 33 36 chr10 10766369 10766672 -129550093 + L1ME LINE L1 5484 5785 -336 32 67 0 0 chr10 10766697 10766757 -129550008 + AT_rich Low_complexity Low_complexity 1 60 0 908 177 135 30 chr10 10767351 10767617 -129549148 + MER58B DNA MER1_type 46 339 -2 1785 168 93 72 chr10 10767771 10768188 -129548577 - MSTB LTR MaLR 0 426 1 720 308 14 0 chr10 10768203 10768411 -129548354 + MIR SINE MIR 52 262 0 2090 96 3 48 chr10 10768871 10769209 -129547556 + AluSg SINE Alu 1 325 0 229 270 34 0 chr10 10769635 10769724 -129547041 + L2 LINE L2 3004 3095 -177 5141 143 19 11 chr10 10769884 10770815 -129545950 + L1MA5 LINE L1 5357 6295 -5 22 35 0 0 chr10 10770881 10770910 -129545855 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr10 10770939 10770969 -129545796 + (TG)n Simple_repeat Simple_repeat 1 60 0 270 0 0 0 chr10 10770969 10770999 -129545766 + (TG)n Simple_repeat Simple_repeat 2 31 0 928 259 169 25 chr10 10771100 10771875 -129544890 + L1ME1 LINE L1 3814 4700 -1446 2754 222 42 47 chr10 10771875 10772773 -129543992 + L1ME1 LINE L1 5254 6147 -19 204 200 21 42 chr10 10775324 10775419 -129541346 + T-rich Low_complexity Low_complexity 3 95 0 738 352 25 22 chr10 10775616 10776212 -129540553 - ERVL LTR ERVL -423 5341 4744 322 284 133 34 chr10 10776582 10776846 -129539919 - ERVL LTR ERVL -1442 4212 3923 352 346 19 0 chr10 10777121 10777283 -129539482 - ERVL LTR ERVL -1950 3535 3371 746 22 0 0 chr10 10777394 10777485 -129539280 + L1PA2 LINE L1 6064 6154 -1 224 30 30 0 chr10 10777778 10777811 -129538954 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 10777993 10778014 -129538751 + AT_rich Low_complexity Low_complexity 1 21 0 880 264 74 89 chr10 10778066 10778581 -129538184 + L2 LINE L2 1419 1925 -1389 243 293 24 0 chr10 10778814 10778896 -129537869 + L2 LINE L2 1616 1699 -1615 294 294 73 37 chr10 10778984 10779202 -129537563 + LTR16A LTR ERVL 72 297 -153 586 299 98 17 chr10 10779302 10779771 -129536994 + L1M4 LINE L1 3652 4158 -1988 752 158 0 17 chr10 10779811 10779931 -129536834 + FLAM_C SINE Alu 2 119 -14 1226 300 93 24 chr10 10780125 10780661 -129536104 + L1M4 LINE L1 4263 4761 -1385 342 67 0 0 chr10 10780661 10780706 -129536059 + (CA)n Simple_repeat Simple_repeat 2 46 0 1226 300 93 24 chr10 10780706 10781059 -129535706 + L1M4 LINE L1 4761 5237 -909 2373 230 66 13 chr10 10781059 10781677 -129535088 - MER82 DNA MER2_type 0 653 3 1226 300 93 24 chr10 10781677 10781832 -129534933 + L1M4 LINE L1 5237 5380 -766 2351 130 8 6 chr10 10782670 10783032 -129533733 + THE1B LTR MaLR 1 363 -1 273 234 96 32 chr10 10785095 10785189 -129531576 + L2 LINE L2 3209 3308 -5 1973 158 68 23 chr10 10785817 10786246 -129530519 - L1MA8 LINE L1 -18 6273 5826 1747 170 0 25 chr10 10786254 10786531 -129530234 + AluJb SINE Alu 9 278 -34 435 119 0 0 chr10 10786531 10786590 -129530175 + Alu SINE Alu 235 293 -19 2014 62 0 0 chr10 10786621 10786861 -129529904 - AluY SINE Alu -30 281 42 2277 155 69 12 chr10 10786891 10787624 -129529141 - L1MA8 LINE L1 -492 5808 5033 1212 171 9 22 chr10 10788852 10789080 -129527685 + AluJo SINE Alu 68 292 -20 1708 169 52 86 chr10 10789713 10789946 -129526819 - MSTA LTR MaLR 0 428 216 1875 110 0 0 chr10 10789946 10790200 -129526565 - AluSx SINE Alu -19 293 40 1708 169 52 86 chr10 10790200 10790409 -129526356 - MSTA LTR MaLR -212 216 1 23 0 0 0 chr10 10790917 10790940 -129525825 + AT_rich Low_complexity Low_complexity 1 23 0 205 398 10 10 chr10 10791852 10791950 -129524815 - MIR3 SINE MIR -54 154 57 263 343 128 42 chr10 10792078 10792197 -129524568 - L2 LINE L2 -644 2670 2563 737 206 103 49 chr10 10792197 10792420 -129524345 - MER46A DNA MER2_type -1 235 1 263 343 128 42 chr10 10792420 10792612 -129524153 - L2 LINE L2 -751 2563 2332 2226 119 3 3 chr10 10793848 10794150 -129522615 - AluSc SINE Alu -7 302 1 2424 106 0 14 chr10 10794844 10795211 -129521554 - L1PB1 LINE L1 -1 6150 5789 1536 142 15 11 chr10 10795210 10795484 -129521281 - L1PB1 LINE L1 -604 5547 5273 869 254 4 48 chr10 10795591 10795819 -129520946 - MER58A DNA MER1_type -6 218 1 1610 258 39 33 chr10 10795938 10796453 -129520312 - LTR40a LTR ERVL 0 519 2 1370 192 51 7 chr10 10797563 10797839 -129518926 + AluJo SINE Alu 8 295 -17 384 216 88 0 chr10 10797881 10797983 -129518782 - L1MA4A LINE L1 -6 6297 6187 4223 155 47 4 chr10 10800440 10801183 -129515582 + L1PA15 LINE L1 5391 6165 0 2466 75 13 0 chr10 10801451 10801757 -129515008 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 10801806 10801830 -129514935 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 10802093 10802115 -129514650 + AT_rich Low_complexity Low_complexity 1 22 0 264 309 87 0 chr10 10803128 10803254 -129513511 - MIR SINE MIR -74 188 52 238 301 27 0 chr10 10805354 10805447 -129511318 - MIR3 SINE MIR -24 184 87 2283 51 3 0 chr10 10805983 10806277 -129510488 + L1PA5 LINE L1 5860 6154 0 429 289 134 34 chr10 10806302 10806541 -129510224 + MLT1J2 LTR MaLR 188 450 0 1587 209 112 5 chr10 10808513 10808949 -129507816 + L1MA9 LINE L1 5792 6274 -38 419 223 43 17 chr10 10808989 10809106 -129507659 + AluJ/FLAM SINE Alu 2 101 -201 279 275 21 49 chr10 10809629 10809771 -129506994 - L1MC4a LINE L1 -1853 5955 5818 555 284 33 0 chr10 10809853 10810036 -129506729 - L1ME3A LINE L1 -61 6109 5921 2519 60 0 0 chr10 10810038 10810338 -129506427 + AluY SINE Alu 1 300 -11 262 215 0 31 chr10 10810393 10810458 -129506307 - MLT1I LTR MaLR -16 574 512 432 272 40 25 chr10 10810606 10810924 -129505841 - MLT1I LTR MaLR -43 366 6 948 330 81 34 chr10 10811134 10811753 -129505012 + ERVL LTR ERVL 2618 3265 -2389 358 397 22 24 chr10 10811825 10812361 -129504404 + ERVL LTR ERVL 3422 3956 -1808 585 362 60 29 chr10 10812410 10812905 -129503860 + ERVL LTR ERVL 4011 4562 -984 578 267 122 30 chr10 10812917 10813392 -129503373 - L1M4 LINE L1 -1305 4841 4323 2033 47 0 4 chr10 10813402 10813660 -129503105 + L1PA4 LINE L1 5897 6153 -2 253 316 116 11 chr10 10813749 10814024 -129502741 - L1M4 LINE L1 -2499 3647 3344 219 69 0 0 chr10 10814085 10814114 -129502651 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2157 104 3 0 chr10 10814117 10814405 -129502360 - AluSp SINE Alu -24 289 1 388 321 56 20 chr10 10815406 10815655 -129501110 - L1M4 LINE L1 -3642 2504 2247 343 304 171 6 chr10 10815807 10815988 -129500777 + MIR SINE MIR 3 213 -49 30 45 0 0 chr10 10816052 10816096 -129500669 + AT_rich Low_complexity Low_complexity 1 44 0 1141 263 116 28 chr10 10816515 10817024 -129499741 - L1ME2 LINE L1 -24 6209 5656 373 281 137 47 chr10 10817006 10817451 -129499314 - L1ME2 LINE L1 -2420 3795 3311 * 1283 248 44 33 chr10 10817442 10817940 -129498825 - L1ME2 LINE L1 -3375 2840 2349 3150 178 38 31 chr10 10817940 10818031 -129498734 - L1MA4 LINE L1 -3 6297 6208 2300 92 3 0 chr10 10818031 10818326 -129498439 - AluY SINE Alu -15 296 1 3150 178 38 31 chr10 10818326 10818870 -129497895 - L1MA4 LINE L1 -92 6208 5654 216 97 0 0 chr10 10818870 10818901 -129497864 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3150 178 38 31 chr10 10818901 10818978 -129497787 - L1MA4 LINE L1 -646 5654 5579 1283 248 44 33 chr10 10818978 10819166 -129497599 - L1ME2 LINE L1 -3866 2349 2146 497 294 60 18 chr10 10819585 10819867 -129496898 - L1ME2 LINE L1 -5997 399 106 325 317 139 22 chr10 10820247 10820651 -129496114 - L1M4 LINE L1 -1667 4479 4029 191 291 156 81 chr10 10820807 10821102 -129495663 + L2 LINE L2 2915 3231 -41 248 0 31 0 chr10 10821195 10821227 -129495538 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2334 87 0 0 chr10 10821229 10821518 -129495247 - AluSq SINE Alu -24 289 1 282 391 16 0 chr10 10822040 10822168 -129494597 + L2 LINE L2 2658 2787 -527 1032 73 0 0 chr10 10822342 10822465 -129494300 - AluSg SINE Alu -187 123 1 1092 194 83 24 chr10 10825916 10826168 -129490597 + AluJo SINE Alu 22 288 -24 213 65 0 0 chr10 10828475 10828506 -129488259 + (T)n Simple_repeat Simple_repeat 1 31 0 300 120 0 0 chr10 10828606 10828656 -129488109 + (T)n Simple_repeat Simple_repeat 1 50 0 198 406 31 8 chr10 10831204 10831332 -129485433 - L2 LINE L2 -4 3268 3138 2738 246 62 45 chr10 10832096 10833823 -129482942 - L1ME1 LINE L1 -41 6059 4300 7544 139 36 5 chr10 10833823 10835086 -129481679 - HSMAR2 DNA Mariner 0 1302 1 2738 246 62 45 chr10 10835086 10835518 -129481247 - L1ME1 LINE L1 -1800 4300 3877 1072 311 33 16 chr10 10835543 10835931 -129480834 - L1ME1 LINE L1 -2383 3697 3298 1339 142 0 45 chr10 10835931 10836177 -129480588 + MER46A DNA MER2_type 1 235 -1 1072 311 33 16 chr10 10836177 10836276 -129480489 - L1ME1 LINE L1 -2782 3298 3202 1436 246 116 69 chr10 10836301 10836867 -129479898 - MLT1E2 LTR MaLR -2 622 4 859 268 102 9 chr10 10836873 10837288 -129479477 - L1ME1 LINE L1 -3076 3004 2492 216 0 0 0 chr10 10837288 10837312 -129479453 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 859 268 102 9 chr10 10837312 10837520 -129479245 - L1ME1 LINE L1 -3588 2492 2305 374 249 190 32 chr10 10837525 10837746 -129479019 - L1ME1 LINE L1 -4341 1920 1665 1048 280 77 45 chr10 10837791 10838971 -129477794 - L1ME1 LINE L1 -4565 1515 311 1764 211 51 16 chr10 10839048 10839499 -129477266 + MLT1C LTR MaLR 1 467 0 207 358 9 46 chr10 10839748 10839857 -129476908 - MIR SINE MIR -81 127 23 348 302 47 23 chr10 10840021 10840150 -129476615 - L2 LINE L2 -238 3075 2944 950 153 12 24 chr10 10840167 10840337 -129476428 + BC200 scRNA scRNA 1 168 -32 686 208 159 23 chr10 10840408 10840659 -129476106 - MER58B DNA MER1_type 0 341 50 425 343 117 8 chr10 10840711 10840959 -129475806 - L2 LINE L2 -545 2769 2495 427 269 17 47 chr10 10843651 10843833 -129472932 + MER58C DNA MER1_type 38 212 -3 2247 114 0 0 chr10 10845177 10845475 -129471290 - AluSg SINE Alu -12 298 1 409 353 131 5 chr10 10845644 10845865 -129470900 + MIR SINE MIR 14 262 0 268 111 0 0 chr10 10845976 10846012 -129470753 + U2 snRNA snRNA 1 36 -152 198 376 24 0 chr10 10846537 10846622 -129470143 + MER5B DNA MER1_type 92 178 0 1065 118 0 33 chr10 10846932 10847085 -129469680 + AluSq SINE Alu 144 291 -22 232 318 255 21 chr10 10847125 10847411 -129469354 + L2 LINE L2 2961 3313 0 328 264 35 28 chr10 10848440 10848584 -129468181 + MER103 DNA DNA 7 151 -15 1813 209 36 52 chr10 10848616 10849118 -129467647 + MER74A LTR ERVL 1 494 -64 312 273 149 46 chr10 10849238 10849432 -129467333 + MIR SINE MIR 20 233 -29 614 149 0 40 chr10 10849875 10850050 -129466715 + (TC)n Simple_repeat Simple_repeat 1 168 0 2057 120 0 0 chr10 10850193 10850467 -129466298 - AluSx SINE Alu -38 274 1 1101 162 29 54 chr10 10852349 10852590 -129464175 - MER46A DNA MER2_type 0 236 2 389 344 58 11 chr10 10854140 10854329 -129462436 + MIR SINE MIR 36 233 -29 276 248 218 0 chr10 10854376 10854477 -129462288 - MIR SINE MIR -50 212 90 1081 38 0 0 chr10 10858180 10858311 -129458454 + L1PA5 LINE L1 6013 6143 -11 3044 152 42 17 chr10 10858344 10858572 -129458193 + L1MB3 LINE L1 5571 5792 -391 2075 132 36 41 chr10 10858572 10858937 -129457828 + THE1B LTR MaLR 1 363 -1 3044 152 42 17 chr10 10858937 10859306 -129457459 + L1MB3 LINE L1 5792 6183 0 2248 123 0 0 chr10 10859368 10859678 -129457087 - AluSx SINE Alu -2 310 1 236 125 54 0 chr10 10860851 10860907 -129455858 + AluS SINE Alu 14 72 -229 573 306 61 45 chr10 10861090 10861469 -129455296 - L2 LINE L2 -638 2676 2292 1994 131 31 0 chr10 10862257 10862548 -129454217 - AluSx SINE Alu -12 300 1 2097 120 0 0 chr10 10862786 10863060 -129453705 + AluSg SINE Alu 1 274 -36 4094 180 53 15 chr10 10863394 10863519 -129453246 - L1MD1 LINE L1 0 6636 6517 2300 113 48 17 chr10 10863519 10863872 -129452893 + THE1B LTR MaLR 1 364 0 4094 180 53 15 chr10 10863872 10864696 -129452069 - L1MD1 LINE L1 -119 6517 5651 5970 234 70 34 chr10 10864733 10869281 -129447484 - L1MD1 LINE L1 -1744 4796 1 345 62 0 0 chr10 10869457 10869505 -129447260 + (TG)n Simple_repeat Simple_repeat 2 49 0 2085 118 54 0 chr10 10869866 10870162 -129446603 - AluSx SINE Alu 0 312 1 312 27 0 0 chr10 10871861 10871898 -129444867 + (TG)n Simple_repeat Simple_repeat 2 38 0 2033 80 95 0 chr10 10871901 10872164 -129444601 - AluSg1 SINE Alu -21 288 1 1292 232 71 12 chr10 10872476 10872812 -129443953 + MLT1A1 LTR MaLR 10 365 0 195 42 0 0 chr10 10873726 10873750 -129443015 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 958 305 94 12 chr10 10873750 10874306 -129442459 - L2 LINE L2 -14 3299 2698 199 158 18 18 chr10 10874306 10874318 -129442447 + (TA)n Simple_repeat Simple_repeat 2 13 -45 2050 137 0 10 chr10 10874318 10874625 -129442140 + AluSx SINE Alu 1 304 -8 199 158 18 18 chr10 10874625 10874669 -129442096 + (TA)n Simple_repeat Simple_repeat 12 58 0 632 250 107 14 chr10 10874799 10875015 -129441750 + MIR SINE MIR 2 237 -25 1924 115 3 30 chr10 10875652 10875948 -129440817 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 10878691 10878712 -129438053 + AT_rich Low_complexity Low_complexity 1 21 0 243 286 163 0 chr10 10878966 10879043 -129437722 + MIR SINE MIR 59 157 -105 620 190 52 17 chr10 10879043 10879217 -129437548 + MER104 DNA MER2_type 1 180 0 243 286 163 0 chr10 10879217 10879237 -129437528 + MIR SINE MIR 157 172 -90 214 286 0 0 chr10 10880541 10880583 -129436182 - MIR SINE MIR -206 56 15 246 354 54 23 chr10 10881604 10881734 -129435031 + MIR SINE MIR 11 144 -118 268 261 101 34 chr10 10885157 10885276 -129431489 - MER117 DNA MER1_type 0 197 71 2082 140 0 10 chr10 10885673 10885966 -129430799 - AluSq SINE Alu -23 290 1 255 315 167 9 chr10 10886759 10886867 -129429898 - L2 LINE L2 0 3272 3148 3880 176 44 21 chr10 10888120 10888364 -129428401 - L1MA7 LINE L1 -25 6266 6029 1094 146 117 0 chr10 10888364 10888569 -129428196 - MER30 DNA MER1_type 0 230 2 3880 176 44 21 chr10 10888569 10889192 -129427573 - L1MA7 LINE L1 -262 6029 5379 212 307 26 33 chr10 10889648 10889801 -129426964 + L2 LINE L2 2264 2415 -899 2118 121 0 17 chr10 10890262 10890559 -129426206 + AluSx SINE Alu 7 298 -14 234 348 33 11 chr10 10891075 10891167 -129425598 - MIR SINE MIR -90 118 25 198 0 0 0 chr10 10891254 10891276 -129425489 + (TG)n Simple_repeat Simple_repeat 1 22 0 2205 121 3 0 chr10 10892608 10892914 -129423851 + AluSg SINE Alu 1 307 -3 3336 139 38 0 chr10 10893255 10893789 -129422976 - MER41C LTR ERV1 0 554 1 243 149 27 135 chr10 10894491 10894565 -129422200 + MER5A DNA MER1_type 106 171 -18 257 324 45 36 chr10 10896744 10896855 -129419910 + MIR3 SINE MIR 5 116 -92 431 315 158 59 chr10 10896937 10897756 -129419009 - L2 LINE L2 -943 2371 1472 2147 236 19 49 chr10 10898262 10898640 -129418125 - LTR53 LTR ERVL 0 519 160 2290 87 0 13 chr10 10898640 10898949 -129417816 + AluSg1 SINE Alu 1 305 -4 2147 236 19 49 chr10 10898949 10899105 -129417660 - LTR53 LTR ERVL -359 160 1 2323 102 0 0 chr10 10899225 10899518 -129417247 - AluSc SINE Alu -14 295 3 580 221 206 51 chr10 10899892 10900216 -129416549 - LTR50 LTR ERVL -10 785 512 225 0 0 0 chr10 10900216 10900241 -129416524 + (CTG)n Simple_repeat Simple_repeat 2 26 0 580 221 206 51 chr10 10900241 10900520 -129416245 - LTR50 LTR ERVL -283 512 1 1537 291 47 47 chr10 10900618 10901303 -129415462 - MER115 DNA AcHobo 0 693 9 826 281 58 27 chr10 10901299 10901627 -129415138 - LTR33 LTR ERVL -183 338 1 * 194 372 18 9 chr10 10902397 10902510 -129414255 + MIR SINE MIR 112 225 -37 609 80 0 0 chr10 10904109 10904184 -129412581 + AluY SINE Alu 5 79 -232 2045 71 0 8 chr10 10904209 10904463 -129412302 + AluY SINE Alu 48 299 -12 4706 118 9 2 chr10 10904510 10905140 -129411625 - MER41B LTR ERV1 0 635 1 563 291 81 14 chr10 10905349 10905559 -129411206 - MIR SINE MIR -34 228 5 2299 188 36 81 chr10 10905590 10906174 -129410591 - MER89 LTR ERV1 -1 558 1 350 123 0 4 chr10 10906767 10906985 -129409780 + AluSq SINE Alu 1 306 0 220 315 82 0 chr10 10907591 10907664 -129409101 + MIR SINE MIR 47 125 -83 201 167 0 24 chr10 10908870 10908912 -129407853 + (CA)n Simple_repeat Simple_repeat 2 42 0 2163 118 0 0 chr10 10910027 10910316 -129406449 + AluSx SINE Alu 1 289 -23 183 42 0 0 chr10 10910872 10910896 -129405869 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 10910895 10910933 -129405832 + (TG)n Simple_repeat Simple_repeat 2 39 0 569 305 11 11 chr10 10911254 10911444 -129405321 + MIR3 SINE MIR 3 192 -16 344 327 19 0 chr10 10912230 10912337 -129404428 + MIR SINE MIR 53 161 -101 2150 159 31 29 chr10 10912358 10912478 -129404287 - MLT1B LTR MaLR -3 387 269 2256 120 0 0 chr10 10912478 10912786 -129403979 - AluSx SINE Alu -4 308 1 2150 159 31 29 chr10 10912786 10913049 -129403716 - MLT1B LTR MaLR -121 269 3 235 250 62 70 chr10 10913053 10913181 -129403584 - LTR16A LTR ERVL -10 440 314 2615 131 20 43 chr10 10913193 10913597 -129403168 - Tigger2a DNA MER2_type -2274 434 39 2968 148 12 26 chr10 10913597 10913904 -129402861 - LTR45B LTR ERV1 0 489 190 2376 84 3 0 chr10 10913904 10914200 -129402565 - AluSp SINE Alu -16 297 1 2968 148 12 26 chr10 10914200 10914384 -129402381 - LTR45B LTR ERV1 -299 190 5 2615 131 20 43 chr10 10914384 10914423 -129402342 - Tigger2a DNA MER2_type -2669 39 1 477 278 111 48 chr10 10914423 10914691 -129402074 - LTR16A LTR ERVL -147 303 19 1386 186 26 89 chr10 10916004 10916222 -129400543 - MLT1A2 LTR MaLR -16 358 173 2221 109 63 29 chr10 10916222 10916572 -129400193 - THE1B LTR MaLR 0 364 3 1386 186 26 89 chr10 10916572 10916735 -129400030 - MLT1A2 LTR MaLR -201 173 1 202 192 39 0 chr10 10916746 10916798 -129399967 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 538 299 119 44 chr10 10916826 10917441 -129399324 - L2 LINE L2 -223 3090 2425 582 272 218 18 chr10 10917567 10917961 -129398804 + LTR33A LTR ERVL 2 474 -49 207 184 0 0 chr10 10918924 10918962 -129397803 + (CA)n Simple_repeat Simple_repeat 2 39 0 18228 34 1 1 chr10 10919238 10922071 -129394694 - L1PA2 LINE L1 -4 6151 3319 931 171 124 16 chr10 10922071 10922328 -129394437 + MER33 DNA MER1_type 30 314 -10 438 290 183 0 chr10 10922504 10922683 -129394082 + MIR SINE MIR 31 244 -18 4267 119 17 12 chr10 10923733 10924373 -129392392 + L1PB1 LINE L1 5506 6148 -3 589 254 141 39 chr10 10924601 10924857 -129391908 - L2 LINE L2 -1 3312 3031 379 200 14 0 chr10 10924857 10924927 -129391838 - AluS SINE Alu -237 71 1 455 278 125 23 chr10 10925565 10925781 -129390984 - MIR SINE MIR -2 260 23 262 234 0 16 chr10 10925906 10925970 -129390795 + CT-rich Low_complexity Low_complexity 1 63 0 792 131 0 0 chr10 10926532 10926639 -129390126 + AluSq/x SINE Alu 3 109 -203 570 29 0 0 chr10 10927234 10927302 -129389463 + (CA)n Simple_repeat Simple_repeat 2 69 0 501 284 106 23 chr10 10927476 10927694 -129389071 - MIR SINE MIR -12 250 15 2274 16 0 0 chr10 10929012 10929257 -129387508 - L1PA2 LINE L1 -2 6153 5909 831 268 19 48 chr10 10929957 10930226 -129386539 - LTR16A LTR ERVL 0 450 190 509 277 133 6 chr10 10930286 10930452 -129386313 - LTR16A LTR ERVL -248 202 16 404 265 118 38 chr10 10930484 10930722 -129386043 - L2 LINE L2 0 3313 3057 514 274 152 20 chr10 10930939 10931136 -129385629 + MER58A DNA MER1_type 1 223 -1 480 351 86 23 chr10 10931142 10931492 -129385273 - L2 LINE L2 -1728 1586 1215 2194 158 0 50 chr10 10932118 10932498 -129384267 - THE1B LTR MaLR -3 361 1 258 259 25 25 chr10 10932556 10932637 -129384128 - LTR33A LTR ERVL 0 523 443 30 77 0 0 chr10 10933544 10933609 -129383156 + AT_rich Low_complexity Low_complexity 1 65 0 497 320 55 28 chr10 10933635 10934063 -129382702 + L1MEd LINE L1 974 1498 -992 253 325 26 70 chr10 10934450 10934678 -129382087 - L2 LINE L2 -2202 1112 895 6971 72 32 6 chr10 10935372 10936454 -129380311 - L1PA10 LINE L1 0 6168 5080 22 0 0 0 chr10 10936931 10936953 -129379812 + AT_rich Low_complexity Low_complexity 1 22 0 2127 125 0 25 chr10 10937729 10938050 -129378715 - AluSq SINE Alu 0 313 1 279 0 0 0 chr10 10940397 10940428 -129376337 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7773 24 0 2 chr10 10940428 10941573 -129375192 - L1PA4 LINE L1 -18 6137 4975 198 118 0 0 chr10 10942879 10942913 -129373852 + (CA)n Simple_repeat Simple_repeat 2 35 0 491 283 18 0 chr10 10943535 10943695 -129373070 + MIR3 SINE MIR 41 205 -3 2201 111 0 0 chr10 10944780 10945068 -129371697 + AluSg SINE Alu 1 288 -22 189 309 12 12 chr10 10945458 10945539 -129371226 - MIR3 SINE MIR -3 205 125 672 294 56 53 chr10 10945879 10946202 -129370563 + L3 LINE CR1 966 1289 -288 283 359 77 21 chr10 10946824 10947058 -129369707 + L3 LINE CR1 1316 1562 -15 2912 128 12 2 chr10 10947222 10947652 -129369113 - MER57B LTR ERV1 0 434 1 189 329 27 14 chr10 10947656 10947729 -129369036 + MER5A DNA MER1_type 4 77 -112 822 217 35 25 chr10 10947765 10947968 -129368797 + MER3 DNA MER1_type 5 209 0 193 188 42 42 chr10 10948068 10948116 -129368649 - L3 LINE CR1 -3 1574 1527 307 321 93 21 chr10 10949753 10949893 -129366872 - MER5A DNA MER1_type 0 189 40 * 413 257 51 25 chr10 10949758 10949911 -129366854 + MER5A DNA MER1_type 5 175 -3 217 309 12 12 chr10 10951373 10951454 -129365311 + MIR SINE MIR 44 124 -84 3283 137 79 57 chr10 10951981 10952578 -129364187 - MER4B LTR ERV1 0 610 1 189 315 22 22 chr10 10952625 10952717 -129364048 - MIR SINE MIR -111 151 60 324 320 20 48 chr10 10952767 10952914 -129363851 - MIR3 SINE MIR -62 146 4 214 326 31 10 chr10 10953726 10953824 -129362941 + MER5B DNA MER1_type 1 100 -78 710 293 137 30 chr10 10953982 10954647 -129362118 + L1ME4a LINE L1 5384 6119 -2 372 269 93 116 chr10 10955768 10956217 -129360548 - L2 LINE L2 -2 3270 2832 466 183 86 0 chr10 10956224 10956317 -129360448 - MLT1H LTR MaLR -3 546 446 310 337 20 0 chr10 10956386 10956484 -129360281 - MLT1H LTR MaLR -222 327 228 617 303 0 27 chr10 10956815 10957000 -129359765 + MIR SINE MIR 31 210 -52 370 360 57 19 chr10 10957083 10957400 -129359365 - L2 LINE L2 -663 2651 2323 1409 224 0 8 chr10 10958490 10958758 -129358007 + MER66B LTR ERV1 1 266 -220 1317 152 0 5 chr10 10958758 10958956 -129357809 + AluSg/x SINE Alu 99 295 -17 878 156 87 50 chr10 10958959 10959177 -129357588 + MER66A LTR ERV1 253 478 0 27 29 0 0 chr10 10960945 10960979 -129355786 + AT_rich Low_complexity Low_complexity 1 34 0 2266 82 30 0 chr10 10961796 10962099 -129354666 - AluSx SINE Alu 0 312 1 465 371 33 4 chr10 10962230 10962475 -129354290 + MIR SINE MIR 1 252 -10 2546 68 0 0 chr10 10962769 10963078 -129353687 - AluY SINE Alu -2 309 1 744 275 35 5 chr10 10963839 10964039 -129352726 - MIR SINE MIR -27 235 30 3953 65 18 0 chr10 10964818 10965308 -129351457 - L1PA10 LINE L1 0 6168 5670 25 0 0 0 chr10 10965702 10965727 -129351038 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 10965766 10965795 -129350970 + AT_rich Low_complexity Low_complexity 1 29 0 267 31 0 0 chr10 10966868 10966900 -129349865 + (CA)n Simple_repeat Simple_repeat 2 33 0 1709 172 10 3 chr10 10967018 10967314 -129349451 + AluSq SINE Alu 3 300 -13 4311 77 2 0 chr10 10967987 10968520 -129348245 + L1PA10 LINE L1 5619 6152 -16 24 0 0 0 chr10 10969494 10969518 -129347247 + AT_rich Low_complexity Low_complexity 1 24 0 236 250 36 0 chr10 10969690 10969746 -129347019 - tRNA-Ile-ATT tRNA tRNA -9 68 11 23 54 0 0 chr10 10969815 10969852 -129346913 + AT_rich Low_complexity Low_complexity 1 37 0 587 105 0 0 chr10 10970899 10970975 -129345790 + AluJ/FLAM SINE Alu 2 77 -235 1644 133 12 8 chr10 10970976 10971216 -129345549 + AluSq SINE Alu 40 280 -33 288 0 0 0 chr10 10971219 10971251 -129345514 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 189 279 68 87 chr10 10972224 10972377 -129344388 - MIR3 SINE MIR -63 145 9 227 208 0 0 chr10 10974838 10974886 -129341879 + L1MC4 LINE L1 6617 6664 -1378 2742 219 28 40 chr10 10978307 10978609 -129338156 - MER82 DNA MER2_type -6 647 343 2346 125 146 11 chr10 10978609 10978986 -129337779 + MSTA LTR MaLR 1 428 0 2742 219 28 40 chr10 10978986 10979337 -129337428 - MER82 DNA MER2_type -310 343 2 333 0 0 0 chr10 10979385 10979422 -129337343 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 22 0 0 chr10 10979765 10979810 -129336955 + (TG)n Simple_repeat Simple_repeat 1 45 0 225 0 0 0 chr10 10979809 10979834 -129336931 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 861 161 0 22 chr10 10979834 10979971 -129336794 - AluJo/FRAM SINE Alu -37 275 142 1214 142 0 0 chr10 10979973 10980142 -129336623 - AluJo SINE Alu -139 173 5 410 259 178 11 chr10 10980339 10980524 -129336241 - MIR SINE MIR 0 262 47 238 356 19 0 chr10 10980524 10980628 -129336137 - L2 LINE L2 -577 2737 2632 450 334 106 50 chr10 10981027 10981763 -129335002 + L2 LINE L2 2443 3225 -47 2584 208 28 73 chr10 10981763 10982404 -129334361 - LTR9 LTR ERV1 0 612 1 450 334 106 50 chr10 10982404 10982446 -129334319 + L2 LINE L2 3225 3263 -9 705 220 38 0 chr10 10983210 10983342 -129333423 + MER58A DNA MER1_type 5 141 0 363 182 0 0 chr10 10983342 10983404 -129333361 + AluSp SINE Alu 138 199 -104 921 66 0 59 chr10 10983424 10983560 -129333205 + AluSg/x SINE Alu 175 302 -10 463 191 11 11 chr10 10983560 10983654 -129333111 + MER58A DNA MER1_type 131 224 0 2395 53 0 50 chr10 10983710 10984031 -129332734 + AluY SINE Alu 1 305 -6 561 70 0 0 chr10 10984032 10984103 -129332662 + Alu SINE Alu 2 72 -237 184 309 29 15 chr10 10984559 10984627 -129332138 - MIR3 SINE MIR -45 163 95 850 142 0 0 chr10 10985243 10985363 -129331402 + AluJ SINE Alu 1 120 -192 232 271 0 0 chr10 10985363 10985411 -129331354 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 934 213 0 0 chr10 10985418 10985592 -129331173 + AluJ SINE Alu 130 303 -9 2376 46 40 16 chr10 10985728 10986032 -129330733 + AluY SINE Alu 1 311 0 636 297 74 13 chr10 10986650 10986879 -129329886 - MIR SINE MIR -11 251 9 256 198 22 110 chr10 10988267 10988358 -129328407 - MIR SINE MIR -57 205 123 2182 114 0 3 chr10 10990971 10991268 -129325497 - AluSx SINE Alu -16 296 1 210 399 34 11 chr10 10991436 10991614 -129325151 - MIR SINE MIR -12 250 69 1407 56 1 1 chr10 10991624 10991812 -129324953 - L1PA6 LINE L1 -291 5863 5698 757 47 0 47 chr10 10991812 10991912 -129324853 + L1PA5 LINE L1 6053 6153 -1 249 33 0 0 chr10 10992926 10992956 -129323809 + (A)n Simple_repeat Simple_repeat 1 30 0 275 310 80 0 chr10 10995001 10995114 -129321651 + MIR SINE MIR 121 242 -20 261 98 0 0 chr10 10995482 10995523 -129321242 + (CA)n Simple_repeat Simple_repeat 1 41 0 802 274 83 76 chr10 10995965 10996593 -129320172 - L1MC4a LINE L1 -1909 5899 5268 31 68 0 0 chr10 10996871 10996930 -129319835 + AT_rich Low_complexity Low_complexity 1 59 0 482 333 50 20 chr10 10997167 10997464 -129319301 - L1MC4a LINE L1 -1537 4609 4304 440 286 63 80 chr10 10997642 10997717 -129319048 - MLT1I LTR MaLR -6 403 328 1667 93 0 9 chr10 10997717 10997943 -129318822 - AluSc SINE Alu -3 306 83 440 286 63 80 chr10 10997943 10998230 -129318535 - MLT1I LTR MaLR -81 328 47 312 137 0 0 chr10 11001410 11001461 -129315304 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 268 378 68 60 chr10 11003001 11003337 -129313428 + L2 LINE L2 2920 3258 -14 289 314 87 115 chr10 11003356 11003748 -129313017 + L2 LINE L2 2892 3272 0 181 299 184 23 chr10 11004283 11004370 -129312395 + MIR SINE MIR 47 147 -115 2144 119 0 25 chr10 11004495 11004813 -129311952 - AluSq SINE Alu -3 310 1 2569 124 3 0 chr10 11006273 11006636 -129310129 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 11007458 11007494 -129309271 + (TG)n Simple_repeat Simple_repeat 2 37 0 1923 164 0 3 chr10 11008438 11008737 -129308028 + AluJo SINE Alu 3 300 -12 310 321 57 0 chr10 11008754 11008860 -129307905 + L2 LINE L2 3151 3262 -10 184 237 26 0 chr10 11009918 11009956 -129306809 - MIR SINE MIR -76 132 94 207 241 51 51 chr10 11011234 11011313 -129305452 + L2 LINE L2 2095 2173 -1141 1156 186 4 8 chr10 11013680 11013917 -129302848 + L1MB7 LINE L1 5431 5666 -518 40546 35 23 2 chr10 11013923 11019950 -129296815 + L1PA2 LINE L1 1 6155 0 1532 216 44 33 chr10 11019991 11020441 -129296324 + L1MB7 LINE L1 5652 6106 -78 358 82 0 0 chr10 11020470 11020519 -129296246 - MADE1 DNA Mariner -28 52 4 320 132 0 0 chr10 11020523 11020576 -129296189 + L1MB8 LINE L1 6120 6172 -6 349 299 70 88 chr10 11020593 11020877 -129295888 + L1ME3A LINE L1 5811 6089 -81 821 180 40 110 chr10 11022899 11023199 -129293566 + MLT1D LTR MaLR 82 360 -145 214 321 83 0 chr10 11023325 11023409 -129293356 - MIR SINE MIR -82 180 90 1804 208 69 38 chr10 11024100 11024625 -129292140 - L1ME2 LINE L1 -1 6163 5623 867 217 77 114 chr10 11024778 11025235 -129291530 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 11028410 11028494 -129288271 + (TA)n Simple_repeat Simple_repeat 1 85 0 2819 16 0 0 chr10 11029646 11029957 -129286808 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 11030009 11030063 -129286702 + (CA)n Simple_repeat Simple_repeat 1 54 0 287 267 140 7 chr10 11031209 11031359 -129285406 - L1ME1 LINE L1 -4 6162 5993 2042 147 7 0 chr10 11031741 11032041 -129284724 + AluSx SINE Alu 1 302 -10 230 373 13 32 chr10 11032201 11032359 -129284406 + MIR SINE MIR 49 203 -59 189 302 208 10 chr10 11032921 11032965 -129283800 + L2 LINE L2 3153 3187 -85 2227 113 3 0 chr10 11032965 11033267 -129283498 - AluSp SINE Alu -10 303 1 189 302 208 10 chr10 11033267 11033318 -129283447 + L2 LINE L2 3187 3267 -5 5331 183 27 62 chr10 11033492 11033954 -129282811 - L1MC1 LINE L1 -9 6604 6127 1774 193 10 0 chr10 11033954 11034259 -129282506 + AluJb SINE Alu 3 310 -2 5331 183 27 62 chr10 11034259 11034796 -129281969 - L1MC1 LINE L1 -486 6127 5573 2105 137 0 7 chr10 11034796 11035095 -129281670 - AluSx SINE Alu -15 297 1 5331 183 27 62 chr10 11035095 11036430 -129280335 - L1MC1 LINE L1 -1040 5573 4346 8837 189 71 50 chr10 11036430 11039932 -129276833 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 11040503 11040686 -129276079 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 11042346 11042655 -129274110 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 11042768 11042921 -129273844 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 11043197 11043257 -129273508 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 11043295 11043341 -129273424 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 11043315 11043875 -129272890 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 11044453 11044782 -129271983 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 11047526 11047827 -129268938 + AluJb SINE Alu 1 300 -12 2128 151 47 16 chr10 11049526 11049890 -129266875 + THE1C LTR MaLR 1 375 0 1507 181 27 34 chr10 11051791 11052084 -129264681 + AluJo SINE Alu 1 291 -21 2025 158 137 11 chr10 11052156 11052536 -129264229 - MSTA LTR MaLR 0 428 1 180 268 71 93 chr10 11053594 11053663 -129263102 + MIR SINE MIR 2 71 -191 1967 145 7 3 chr10 11053663 11053959 -129262806 + AluSx SINE Alu 1 297 -15 180 268 71 93 chr10 11053959 11054072 -129262693 + MIR SINE MIR 71 180 -82 43118 34 26 2 chr10 11054072 11060064 -129256701 - L1PA3 LINE L1 -1 6154 12 1567 175 18 80 chr10 11060533 11060863 -129255902 - MLT1A1 LTR MaLR 0 365 61 1675 138 0 23 chr10 11060863 11061123 -129255642 - AluSx SINE Alu -22 290 37 1567 175 18 80 chr10 11061123 11061181 -129255584 - MLT1A1 LTR MaLR -304 61 1 208 360 13 39 chr10 11061381 11061534 -129255231 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 11061992 11062141 -129254624 + (TA)n Simple_repeat Simple_repeat 2 154 0 226 264 28 14 chr10 11062431 11062503 -129254262 - L2 LINE L2 -38 3234 3162 794 239 46 21 chr10 11112590 11112829 -129203936 + L1ME1 LINE L1 5026 5270 -876 322 85 0 0 chr10 11112829 11112876 -129203889 + MADE1 DNA Mariner 1 47 -33 3059 232 32 48 chr10 11112895 11113803 -129202962 + L1ME1 LINE L1 5269 6161 -5 473 164 0 65 chr10 11113813 11114079 -129202686 + GA-rich Low_complexity Low_complexity 1 248 0 247 343 6 45 chr10 11115208 11115264 -129201501 - L1MC/D LINE L1 -1907 5901 5844 1777 162 3 23 chr10 11115264 11115573 -129201192 - AluJo SINE Alu -9 303 1 247 343 6 45 chr10 11115573 11115694 -129201071 - L1MC/D LINE L1 -1964 5844 5731 347 238 125 50 chr10 11116097 11116257 -129200508 + MIR SINE MIR 90 261 -1 1696 158 0 55 chr10 11116503 11116639 -129200126 + AluSx SINE Alu 1 143 -169 2460 80 3 3 chr10 11116639 11116950 -129199815 + AluY SINE Alu 1 311 0 1696 158 0 55 chr10 11116950 11117141 -129199624 + AluSx SINE Alu 143 310 -2 317 269 10 39 chr10 11117407 11117511 -129199254 - L2 LINE L2 -34 3279 3179 2377 91 0 0 chr10 11117750 11118048 -129198717 - AluSc SINE Alu 0 309 12 246 156 0 0 chr10 11118141 11118186 -129198579 + (CA)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 11118680 11118709 -129198056 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2566 62 0 3 chr10 11119257 11119562 -129197203 - AluY SINE Alu -7 304 1 2063 128 3 10 chr10 11119826 11120132 -129196633 - AluSx SINE Alu -8 304 1 296 306 44 49 chr10 11120814 11120997 -129195768 + L2 LINE L2 3132 3313 0 23 54 0 0 chr10 11121222 11121259 -129195506 + AT_rich Low_complexity Low_complexity 1 37 0 2172 127 3 16 chr10 11121456 11121772 -129194993 + AluSx SINE Alu 1 312 0 465 199 33 124 chr10 11123235 11123437 -129193328 + L2 LINE L2 3027 3205 -108 2062 84 59 0 chr10 11123437 11123710 -129193055 - AluSc SINE Alu -20 289 1 465 199 33 124 chr10 11123710 11123748 -129193017 + L2 LINE L2 3205 3245 -68 674 288 14 28 chr10 11123830 11124045 -129192720 + MIR SINE MIR 15 226 -36 2364 106 0 0 chr10 11124422 11124733 -129192032 - AluSq SINE Alu -2 311 1 260 111 0 0 chr10 11124828 11124864 -129191901 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 746 146 6 24 chr10 11124864 11125029 -129191736 + GA-rich Low_complexity Low_complexity 1 162 0 21 36 0 0 chr10 11125497 11125525 -129191240 + AT_rich Low_complexity Low_complexity 1 28 0 218 265 15 15 chr10 11125698 11125766 -129190999 - MIR SINE MIR -67 141 74 2199 119 0 10 chr10 11125889 11126192 -129190573 + AluSx SINE Alu 1 300 -12 198 264 0 38 chr10 11126368 11126421 -129190344 - MIR SINE MIR -13 249 199 1530 176 0 88 chr10 11126448 11126777 -129189988 - AluJo SINE Alu -12 300 1 196 254 90 97 chr10 11126837 11126971 -129189794 + L2 LINE L2 3181 3313 0 2142 134 0 0 chr10 11127648 11127955 -129188810 - AluSx SINE Alu -5 307 1 1657 178 0 26 chr10 11128374 11128683 -129188082 - AluJo SINE Alu -11 301 1 722 257 41 41 chr10 11128689 11128907 -129187858 + MER20 DNA MER1_type 1 218 -1 2033 144 3 0 chr10 11130031 11130336 -129186429 + AluSx SINE Alu 1 306 -6 352 240 11 27 chr10 11131720 11131903 -129184862 + GA-rich Low_complexity Low_complexity 1 180 0 2127 126 0 0 chr10 11131980 11132297 -129184468 - AluSx SINE Alu 0 317 1 2350 84 7 0 chr10 11132302 11132610 -129184155 - AluSx SINE Alu -2 310 1 238 240 123 45 chr10 11132668 11132822 -129183943 - L2 LINE L2 -1690 1624 1459 23 0 0 0 chr10 11134740 11134763 -129182002 + AT_rich Low_complexity Low_complexity 1 23 0 1819 15 0 0 chr10 11135153 11135353 -129181412 + AluY SINE Alu 111 310 -1 1372 215 90 56 chr10 11137201 11137577 -129179188 + MSTD LTR MaLR 3 391 -5 1530 313 125 33 chr10 11137889 11138469 -129178296 + L2 LINE L2 1905 2599 -715 1762 189 3 3 chr10 11138469 11138771 -129177994 - AluJo SINE Alu -10 302 1 1530 313 125 33 chr10 11138771 11139093 -129177672 + L2 LINE L2 2599 2890 -424 219 289 259 31 chr10 11139103 11139331 -129177434 + L2 LINE L2 3028 3307 -6 833 263 29 0 chr10 11139487 11139696 -129177069 + MER58A DNA MER1_type 10 224 0 340 156 62 0 chr10 11139882 11139946 -129176819 + L2 LINE L2 3232 3299 -14 272 273 0 0 chr10 11139964 11140041 -129176724 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 545 315 94 8 chr10 11140233 11140468 -129176297 + MIR SINE MIR 7 261 -1 859 231 56 19 chr10 11140563 11140779 -129175986 + MIR SINE MIR 2 225 -37 2593 115 43 0 chr10 11142794 11143143 -129173622 - THE1B LTR MaLR 0 364 1 1749 144 52 20 chr10 11143246 11143593 -129173172 + L1MA7 LINE L1 5934 6291 0 260 122 41 0 chr10 11143707 11143756 -129173009 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1838 142 0 27 chr10 11144055 11144350 -129172415 + AluJb SINE Alu 1 287 -25 4968 151 27 21 chr10 11144354 11145216 -129171549 - L1MA6 LINE L1 -12 6288 5422 376 317 25 17 chr10 11145330 11145450 -129171315 + L2 LINE L2 3147 3267 -5 2032 121 0 33 chr10 11146924 11147230 -129169535 + AluSx SINE Alu 13 308 -4 228 369 72 0 chr10 11147431 11147542 -129169223 - MIR3 SINE MIR -6 202 84 465 240 0 10 chr10 11147881 11147985 -129168780 - MER5A DNA MER1_type -83 106 4 2224 105 6 16 chr10 11148159 11148472 -129168293 - AluSx SINE Alu -2 310 1 247 200 22 0 chr10 11149704 11149749 -129167016 - LTR16C LTR ERVL -10 481 436 188 316 0 35 chr10 11150131 11150188 -129166577 + L2 LINE L2 3195 3249 -23 188 316 0 35 chr10 11150193 11150250 -129166515 + L2 LINE L2 3195 3249 -23 192 236 0 180 chr10 11150255 11150304 -129166461 + L2 LINE L2 3195 3223 -49 2104 115 7 7 chr10 11150304 11150628 -129166137 - AluSx SINE Alu 0 312 1 192 236 0 180 chr10 11150628 11150667 -129166098 + L2 LINE L2 3223 3267 -5 2458 76 0 0 chr10 11150715 11151017 -129165748 + AluY SINE Alu 1 302 -9 2094 143 7 0 chr10 11152754 11153054 -129163711 + AluSx SINE Alu 1 302 -10 1780 236 94 31 chr10 11153226 11153769 -129162996 - MLT1E LTR MaLR -2 591 15 953 183 144 18 chr10 11154105 11154334 -129162431 + LOR1a LTR ERV1 238 495 -2 185 0 40 0 chr10 11154637 11154662 -129162103 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1806 153 0 11 chr10 11154662 11154944 -129161821 - AluSx SINE Alu -33 279 1 207 310 97 44 chr10 11155063 11155176 -129161589 + MIR SINE MIR 20 138 -70 520 283 66 0 chr10 11155178 11155330 -129161435 + L2 LINE L2 1858 2019 -1295 238 276 175 72 chr10 11155457 11155638 -129161127 - L2 LINE L2 -1426 1888 1727 2145 134 0 3 chr10 11155638 11155945 -129160820 - AluSx SINE Alu -6 306 1 238 276 175 72 chr10 11155945 11156140 -129160625 - L2 LINE L2 -1587 1727 1473 567 234 81 53 chr10 11157702 11157911 -129158854 - MIR SINE MIR -36 226 12 206 200 13 6 chr10 11158627 11158672 -129158093 + L2 LINE L2 3186 3272 -41 1844 142 0 77 chr10 11160552 11160890 -129155875 + AluSx SINE Alu 1 312 0 1530 193 53 3 chr10 11162194 11162479 -129154286 - AluJo SINE Alu -13 299 1 1483 292 46 52 chr10 11164605 11165254 -129151511 + L1MC4a LINE L1 4945 5412 -758 2174 102 0 7 chr10 11165254 11165588 -129151177 - AluSg SINE Alu 0 332 1 1483 292 46 52 chr10 11165588 11165981 -129150784 + L1MC4a LINE L1 5412 5806 -364 509 285 58 12 chr10 11166159 11166331 -129150434 - MIR SINE MIR -70 192 13 205 324 104 22 chr10 11166394 11166542 -129150223 + MER5A DNA MER1_type 6 189 0 628 273 46 21 chr10 11166576 11166770 -129149995 - MIR SINE MIR -61 201 3 211 264 0 0 chr10 11166892 11166945 -129149820 - MIR SINE MIR -60 148 96 290 360 23 6 chr10 11167491 11167666 -129149099 + MIR SINE MIR 30 207 -55 1794 160 3 29 chr10 11167688 11168000 -129148765 + AluJo SINE Alu 1 304 -8 326 295 97 14 chr10 11168040 11168247 -129148518 - L3 LINE CR1 -205 1372 1149 1605 172 51 3 chr10 11169618 11169914 -129146851 + AluJo SINE Alu 1 310 -2 1904 118 3 78 chr10 11170017 11170339 -129146426 + AluSx SINE Alu 1 298 -14 1981 138 3 22 chr10 11172505 11172823 -129143942 + AluSx SINE Alu 1 312 0 801 135 8 16 chr10 11172989 11173115 -129143650 + AluJb SINE Alu 1 125 -187 269 109 62 0 chr10 11173120 11173184 -129143581 + GA-rich Low_complexity Low_complexity 2 69 0 1475 202 10 17 chr10 11173483 11173775 -129142990 + AluJo SINE Alu 1 290 -22 573 15 0 0 chr10 11174037 11174103 -129142662 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 2070 99 0 48 chr10 11174103 11174397 -129142368 - AluSx SINE Alu -32 280 1 699 178 153 0 chr10 11176488 11176645 -129140120 - MER5A DNA MER1_type -7 182 2 2503 152 7 22 chr10 11178029 11178438 -129138327 - MER57A LTR ERV1 0 403 1 501 270 68 20 chr10 11178474 11178838 -129137927 - LTR16B LTR ERVL 0 464 48 189 0 0 0 chr10 11178961 11178982 -129137783 + (CA)n Simple_repeat Simple_repeat 1 21 0 1162 134 0 29 chr10 11180140 11180311 -129136454 + AluSg/x SINE Alu 124 289 -23 230 276 17 0 chr10 11180599 11180657 -129136108 + C-rich Low_complexity Low_complexity 3 61 0 2001 131 7 0 chr10 11181102 11181409 -129135356 - AluSx SINE Alu 0 309 1 207 24 24 48 chr10 11182603 11182645 -129134120 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2082 132 0 0 chr10 11182648 11182929 -129133836 - AluSx SINE Alu -31 281 1 419 145 0 0 chr10 11182964 11183040 -129133725 - L1MA9 LINE L1 -10 6302 6227 261 267 27 0 chr10 11183313 11183388 -129133377 - MER103 DNA DNA 0 166 90 238 305 146 25 chr10 11183450 11183765 -129133000 + L2 LINE L2 1990 2342 -972 2019 113 33 3 chr10 11184050 11184350 -129132415 + AluSx SINE Alu 1 309 -3 1473 196 0 4 chr10 11184635 11184910 -129131855 - AluJo SINE Alu -38 274 1 530 273 173 18 chr10 11185049 11185269 -129131496 + MIR SINE MIR 8 261 -1 193 313 24 60 chr10 11186081 11186164 -129130601 + MIR SINE MIR 18 97 -165 1585 181 0 52 chr10 11186166 11186476 -129130289 - AluJb SINE Alu -18 294 1 1325 197 114 62 chr10 11186765 11187226 -129129539 - MER66A LTR ERV1 0 478 97 309 337 8 32 chr10 11187288 11187445 -129129320 - MIR SINE MIR -66 142 1 463 349 96 0 chr10 11188797 11188995 -129127770 + MIR SINE MIR 25 241 -21 186 71 0 0 chr10 11189067 11189095 -129127670 + (T)n Simple_repeat Simple_repeat 1 28 0 2123 136 0 0 chr10 11190431 11190740 -129126025 + AluJb SINE Alu 1 309 -3 482 257 27 81 chr10 11191630 11191830 -129124935 + L2 LINE L2 2921 3105 -208 653 233 0 0 chr10 11191830 11191963 -129124802 - FLAM_C SINE Alu 0 133 1 482 257 27 81 chr10 11191963 11192023 -129124742 + L2 LINE L2 3105 3167 -146 189 224 41 0 chr10 11192143 11192192 -129124573 + L2 LINE L2 3262 3312 -1 593 242 26 13 chr10 11192752 11192905 -129123860 - MIR SINE MIR -3 259 105 2301 116 3 0 chr10 11192987 11193297 -129123468 - AluSq SINE Alu -2 311 1 2294 110 10 7 chr10 11194597 11194907 -129121858 - AluSx SINE Alu -1 311 1 429 310 155 14 chr10 11195090 11195303 -129121462 - MIR SINE MIR 0 262 20 33 25 0 0 chr10 11195801 11195841 -129120924 + AT_rich Low_complexity Low_complexity 1 40 0 5892 87 27 60 chr10 11198769 11199337 -129117428 + L1PB2 LINE L1 5255 5783 -368 180 0 0 0 chr10 11199337 11199357 -129117408 + (GA)n Simple_repeat Simple_repeat 2 21 0 5892 87 27 60 chr10 11199357 11199713 -129117052 + L1PB2 LINE L1 5783 6149 -2 343 293 154 35 chr10 11200833 11201092 -129115673 + L1ME3A LINE L1 5307 5596 -2212 409 291 110 0 chr10 11201112 11201366 -129115399 + L1ME3A LINE L1 5651 5932 -189 195 42 0 0 chr10 11202008 11202032 -129114733 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11202237 11202299 -129114466 + (TG)n Simple_repeat Simple_repeat 2 64 0 355 292 73 7 chr10 11203006 11203143 -129113622 - L2 LINE L2 -6 3307 3162 262 255 49 0 chr10 11203719 11203821 -129112944 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1440 252 66 22 chr10 11203822 11204348 -129112417 - MLT2F LTR ERVL -60 603 9 256 310 69 35 chr10 11204407 11204552 -129112213 - L2 LINE L2 -216 3056 2907 651 299 57 30 chr10 11204562 11204784 -129111981 - MER90 LTR ERV1 -13 601 368 1674 162 114 11 chr10 11204784 11205135 -129111630 + MLT1B LTR MaLR 4 390 0 651 299 57 30 chr10 11205135 11205210 -129111555 - MER90 LTR ERV1 -246 368 296 1609 156 58 134 chr10 11205491 11205819 -129110946 + Charlie3 DNA MER1_type 37 2712 0 274 328 38 55 chr10 11206436 11206619 -129110146 - L2 LINE L2 -243 3029 2850 459 214 43 26 chr10 11206975 11207092 -129109673 + L1ME3A LINE L1 6051 6169 -1 346 153 0 9 chr10 11208297 11208368 -129108397 + FAM SINE Alu 115 174 -1 2625 84 31 6 chr10 11208900 11209255 -129107510 + THE1B LTR MaLR 1 364 0 415 276 103 26 chr10 11210294 11210450 -129106315 - L2 LINE L2 -12 3301 3134 975 188 0 0 chr10 11210500 11210660 -129106105 + FRAM SINE Alu 4 163 -3 2224 114 35 44 chr10 11213062 11213429 -129103336 - THE1B LTR MaLR 0 364 1 208 197 0 45 chr10 11214623 11214689 -129102076 - MIR SINE MIR -110 152 90 303 93 0 0 chr10 11215446 11215489 -129101276 + (TG)n Simple_repeat Simple_repeat 2 44 0 457 68 27 0 chr10 11216272 11216346 -129100419 + (GA)n Simple_repeat Simple_repeat 2 77 0 212 278 0 44 chr10 11216585 11216675 -129100090 + GA-rich Low_complexity Low_complexity 2 87 0 354 80 0 0 chr10 11220360 11220410 -129096355 + (TG)n Simple_repeat Simple_repeat 1 50 0 304 184 78 19 chr10 11221574 11221677 -129095088 - MIR SINE MIR -73 189 81 23 0 0 0 chr10 11222498 11222521 -129094244 + AT_rich Low_complexity Low_complexity 1 23 0 310 269 110 39 chr10 11224230 11224563 -129092202 - MLT1K LTR MaLR -2 597 252 232 192 13 64 chr10 11225181 11225259 -129091506 + HSMAR1 DNA Mariner 1214 1287 0 2346 110 0 0 chr10 11225755 11226064 -129090701 + AluSg SINE Alu 1 309 -1 1422 188 4 4 chr10 11226069 11226319 -129090446 + AluJo SINE Alu 1 250 -62 188 32 97 0 chr10 11226342 11226373 -129090392 + A-rich Low_complexity Low_complexity 4 37 0 2168 131 3 0 chr10 11228190 11228502 -129088263 - AluSq SINE Alu 0 313 1 2156 118 7 0 chr10 11228800 11229097 -129087668 - AluSq SINE Alu -14 299 1 565 340 57 37 chr10 11229544 11230311 -129086454 - L2 LINE L2 -213 3059 2276 2297 203 17 53 chr10 11230322 11230799 -129085966 + MLT2B1 LTR ERVL 1 459 -61 450 0 0 0 chr10 11230799 11230849 -129085916 + (TG)n Simple_repeat Simple_repeat 2 51 0 2297 203 17 53 chr10 11230849 11230903 -129085862 + MLT2B1 LTR ERVL 459 513 -7 482 321 124 9 chr10 11230927 11231372 -129085393 - L2 LINE L2 -1069 2245 1750 902 152 0 0 chr10 11231653 11231785 -129084980 + FLAM_C SINE Alu 1 132 -11 373 125 0 0 chr10 11231790 11231846 -129084919 + Alu SINE Alu 240 295 -6 321 243 76 35 chr10 11233792 11233957 -129082808 - LTR16A1 LTR ERVL 0 479 323 1283 321 56 39 chr10 11235297 11236064 -129080701 - ERVL LTR ERVL -1313 4451 3672 216 135 0 0 chr10 11236101 11236138 -129080627 + (CCA)n Simple_repeat Simple_repeat 1 37 0 27 0 0 0 chr10 11236356 11236383 -129080382 + AT_rich Low_complexity Low_complexity 1 27 0 2795 20 0 0 chr10 11236608 11236910 -129079855 + AluY SINE Alu 1 302 -9 1369 81 0 0 chr10 11236910 11237083 -129079682 + AluY SINE Alu 133 305 -6 2090 141 3 0 chr10 11237455 11237767 -129078998 - AluSq SINE Alu 0 313 1 196 398 59 0 chr10 11238004 11238122 -129078643 - L2 LINE L2 -11 3261 3137 2218 104 0 3 chr10 11238374 11238686 -129078079 + AluSx SINE Alu 1 311 0 305 341 70 51 chr10 11238689 11239143 -129077622 - L2 LINE L2 -541 2773 2311 620 62 0 0 chr10 11239143 11239223 -129077542 + AluSg/x SINE Alu 201 280 -32 216 0 0 0 chr10 11239223 11239247 -129077518 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 254 365 29 22 chr10 11239763 11239900 -129076865 - MER5A DNA MER1_type 0 189 52 234 250 36 24 chr10 11240215 11240299 -129076466 + MLT1K LTR MaLR 321 405 -183 2014 127 22 60 chr10 11240370 11240739 -129076026 + THE1A LTR MaLR 1 355 0 226 219 0 0 chr10 11240788 11240829 -129075936 + MLT1K LTR MaLR 548 588 0 252 327 58 10 chr10 11241137 11241241 -129075524 + MIR SINE MIR 35 143 -65 279 247 113 31 chr10 11242507 11242604 -129074161 + MER5B DNA MER1_type 2 106 -72 380 298 27 98 chr10 11243041 11243237 -129073528 - L2 LINE L2 -15 3298 3090 2516 129 48 12 chr10 11243237 11243649 -129073116 + MSTA LTR MaLR 2 428 0 380 298 27 98 chr10 11243649 11243763 -129073002 - L2 LINE L2 -223 3090 2970 2151 128 7 0 chr10 11243763 11244069 -129072696 - AluSx SINE Alu -3 309 2 380 298 27 98 chr10 11244069 11244242 -129072523 - L2 LINE L2 -343 2970 2879 1721 155 61 0 chr10 11244242 11244520 -129072245 + AluSx SINE Alu 1 295 -17 380 298 27 98 chr10 11244520 11244710 -129072055 - L2 LINE L2 -434 2879 2677 233 344 79 46 chr10 11245849 11246813 -129069952 + L2 LINE L2 1966 2961 -353 255 227 0 30 chr10 11248367 11248433 -129068332 + CT-rich Low_complexity Low_complexity 6 69 0 454 283 35 52 chr10 11248509 11248682 -129068083 - MER5B DNA MER1_type -6 172 3 2186 104 0 0 chr10 11249348 11249671 -129067094 - AluSc SINE Alu 0 324 2 1898 151 91 0 chr10 11250042 11250228 -129066537 + MER7A DNA MER2_type 1 169 -2869 2670 107 0 6 chr10 11250228 11250594 -129066171 - THE1B LTR MaLR 0 364 1 1898 151 91 0 chr10 11250594 11250726 -129066039 + MER7A DNA MER2_type 169 346 0 1214 199 92 40 chr10 11250730 11251057 -129065708 - MER2 DNA MER2_type 0 344 1 1763 178 108 52 chr10 11251057 11251501 -129065264 - MLT2B1 LTR ERVL -51 469 1 1692 180 80 42 chr10 11252041 11252491 -129064274 + MLT1C LTR MaLR 1 467 0 2184 118 3 13 chr10 11252598 11252903 -129063862 + AluSc SINE Alu 1 302 -7 4148 183 110 4 chr10 11253010 11253757 -129063008 - LTR1B LTR ERV1 0 826 1 539 261 14 7 chr10 11254083 11254221 -129062544 - MER5B DNA MER1_type 0 178 40 4210 127 13 27 chr10 11254230 11254924 -129061841 + L1MA8 LINE L1 5607 6290 -1 209 288 141 28 chr10 11255018 11255195 -129061570 + MIR SINE MIR 15 211 -51 240 86 0 0 chr10 11255778 11255813 -129060952 + (CA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 11256120 11256140 -129060625 + (CA)n Simple_repeat Simple_repeat 1 20 0 2308 117 0 0 chr10 11257347 11257656 -129059109 - AluSx SINE Alu -3 309 1 574 303 122 30 chr10 11258124 11258649 -129058116 - L1ME4a LINE L1 -195 5926 5354 633 291 66 0 chr10 11259779 11259975 -129056790 + MIR SINE MIR 28 236 -26 445 218 250 45 chr10 11260626 11260846 -129055919 + MER5C DNA MER1_type 25 289 -35 441 179 28 28 chr10 11260846 11260991 -129055774 + GA-rich Low_complexity Low_complexity 2 146 0 688 175 30 85 chr10 11262792 11262992 -129053773 + MER53 DNA DNA 1 189 0 201 233 0 0 chr10 11264823 11264866 -129051899 + (CCCCAA)n Simple_repeat Simple_repeat 3 45 0 437 280 0 65 chr10 11265060 11265228 -129051537 + MIR SINE MIR 80 236 -26 776 248 135 30 chr10 11266137 11266537 -129050228 - MER113 DNA MER1_type? -45 476 35 1888 154 3 25 chr10 11268091 11268410 -129048355 + AluSx SINE Alu 1 312 0 195 42 0 0 chr10 11268483 11268507 -129048258 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 237 342 135 0 chr10 11269130 11269252 -129047513 - L1ME LINE L1 -214 5907 5803 1806 108 0 4 chr10 11269252 11269493 -129047272 - AluSq SINE Alu -20 293 54 237 342 135 0 chr10 11269493 11269563 -129047202 - L1ME LINE L1 -318 5803 5689 2269 101 3 3 chr10 11271084 11271390 -129045375 + AluSc SINE Alu 1 306 -3 809 321 82 27 chr10 11271745 11272462 -129044303 + L2 LINE L2 2307 3068 -245 257 275 14 0 chr10 11272499 11272568 -129044197 + MER116 DNA Mariner 7 76 -4 229 291 187 8 chr10 11272573 11272707 -129044058 + L2 LINE L2 3118 3275 -38 213 39 0 0 chr10 11272711 11272737 -129044028 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 213 333 16 0 chr10 11272776 11272839 -129043926 + L2 LINE L2 3203 3266 -47 864 252 28 33 chr10 11273053 11273267 -129043498 - MER58A DNA MER1_type 0 224 12 429 330 36 10 chr10 11273935 11274129 -129042636 - MIR SINE MIR -1 261 63 807 147 0 21 chr10 11274379 11274522 -129042243 - MER67A LTR ERV1 -322 221 82 487 152 48 29 chr10 11274547 11274652 -129042113 - MER67A LTR ERV1 -432 111 5 1495 207 23 42 chr10 11274658 11275011 -129041754 - MER67A-int LTR ERV1 -23 4913 4568 2278 106 0 3 chr10 11275094 11275397 -129041368 - AluSc SINE Alu -7 302 1 382 170 0 205 chr10 11275595 11275766 -129040999 - MER67A-int LTR ERV1 -467 4469 4334 260 191 162 15 chr10 11275771 11275839 -129040926 - LTR37A LTR ERV1 -336 90 13 6243 218 30 72 chr10 11275854 11277719 -129039046 - MER67A-int LTR ERV1 -687 4249 2463 257 214 36 80 chr10 11277756 11277868 -129038897 - MER67B-int LTR ERV1 -3799 4321 4215 856 251 33 45 chr10 11277871 11278296 -129038469 + MLT1B LTR MaLR 1 387 -3 357 237 92 15 chr10 11278300 11278431 -129038334 - MER67B-int LTR ERV1 -2579 2357 2217 * 550 224 75 42 chr10 11278398 11278639 -129038126 - MER67B-int LTR ERV1 -3004 1932 1684 4543 208 127 47 chr10 11278691 11279992 -129036773 - MER67B-int LTR ERV1 -3438 1498 94 1947 206 33 70 chr10 11280128 11280814 -129035951 - MER67B LTR ERV1 -32 558 8 2258 142 39 25 chr10 11280971 11281330 -129035435 - THE1B LTR MaLR 0 364 1 186 167 258 30 chr10 11281451 11281517 -129035248 + L2 LINE L2 3168 3248 -24 490 155 0 36 chr10 11282626 11282710 -129034055 - MER58A DNA MER1_type -24 83 3 234 0 0 0 chr10 11283108 11283134 -129033631 + (A)n Simple_repeat Simple_repeat 1 26 0 4328 78 49 7 chr10 11286093 11286681 -129030084 - L1MA1 LINE L1 0 6302 5690 309 276 71 10 chr10 11286773 11286871 -129029894 + MIR SINE MIR 9 112 -150 1993 108 0 78 chr10 11287435 11287769 -129028996 - AluSx SINE Alu -2 310 3 297 246 78 53 chr10 11287912 11288090 -129028675 + MIR SINE MIR 26 208 -54 25 0 0 0 chr10 11288130 11288155 -129028610 + AT_rich Low_complexity Low_complexity 1 25 0 419 281 124 52 chr10 11288319 11288586 -129028179 + L2 LINE L2 1875 2160 -1154 239 183 83 17 chr10 11288738 11288798 -129027967 + Charlie8 DNA MER1_type 1364 1427 -990 2722 100 6 0 chr10 11288808 11289159 -129027606 + THE1A LTR MaLR 1 353 -2 436 281 70 116 chr10 11289343 11289670 -129027095 - L2 LINE L2 -5 3267 2956 * 532 361 112 18 chr10 11289666 11290173 -129026592 - L2 LINE L2 -518 2796 2242 1558 154 64 7 chr10 11290542 11290822 -129025943 - AluJo SINE Alu -16 296 1 201 195 0 0 chr10 11291608 11291649 -129025116 + GA-rich Low_complexity Low_complexity 2 42 0 474 267 126 0 chr10 11292628 11292763 -129024002 - MIR SINE MIR -35 227 76 464 126 27 18 chr10 11292810 11292921 -129023844 + (TAGA)n Simple_repeat Simple_repeat 3 114 0 2495 67 0 13 chr10 11294088 11294403 -129022362 - AluY SINE Alu 0 311 1 437 268 75 49 chr10 11294602 11294770 -129021995 + MIR3 SINE MIR 34 208 -35 229 230 69 35 chr10 11294829 11294916 -129021849 - MIR SINE MIR 0 262 173 262 356 29 0 chr10 11295129 11295233 -129021532 - MIR SINE MIR -111 151 45 1023 169 0 16 chr10 11295289 11295472 -129021293 + MER53 DNA DNA 10 189 0 270 0 0 0 chr10 11295992 11296022 -129020743 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3682 187 53 8 chr10 11296839 11297570 -129019195 + L1MB3 LINE L1 5418 6181 -2 226 315 33 43 chr10 11298243 11298335 -129018430 + MIR SINE MIR 33 123 -85 21 0 0 0 chr10 11299170 11299191 -129017574 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 11299424 11299445 -129017320 + AT_rich Low_complexity Low_complexity 1 21 0 248 191 0 21 chr10 11300534 11300581 -129016184 + L2 LINE L2 3256 3301 -12 2218 116 0 0 chr10 11300583 11300876 -129015889 + AluSx SINE Alu 1 293 -19 2151 119 0 0 chr10 11300879 11301172 -129015593 + AluSx SINE Alu 1 293 -19 186 43 0 0 chr10 11301175 11301198 -129015567 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 351 0 0 0 chr10 11301907 11301946 -129014819 + (TG)n Simple_repeat Simple_repeat 2 40 0 5898 107 7 1 chr10 11302527 11303359 -129013406 + L1PA13 LINE L1 5314 6150 -13 198 198 44 99 chr10 11303450 11303541 -129013224 + L3 LINE CR1 1425 1510 -67 369 189 0 14 chr10 11304057 11304131 -129012634 - AluJ/FRAM SINE Alu -14 288 216 588 231 0 0 chr10 11304147 11304264 -129012501 - FLAM_A SINE Alu -6 136 20 2209 117 0 0 chr10 11304277 11304576 -129012189 - AluSx SINE Alu -13 299 1 888 303 65 65 chr10 11304741 11305417 -129011348 - L2 LINE L2 -812 2502 1827 1949 124 22 0 chr10 11305527 11305828 -129010937 - AluY SINE Alu 0 307 1 2041 109 46 57 chr10 11305992 11306360 -129010405 + THE1B LTR MaLR 1 364 0 9729 198 58 51 chr10 11306703 11307289 -129009476 - L1MC2 LINE L1 -11 7756 7176 312 242 11 11 chr10 11307289 11307380 -129009385 - MLT1F1 LTR MaLR -442 125 35 9729 198 58 51 chr10 11307380 11307751 -129009014 - L1MC2 LINE L1 -591 7176 6809 2073 104 3 27 chr10 11307751 11308050 -129008715 + AluSg SINE Alu 1 292 -18 9729 198 58 51 chr10 11308050 11309571 -129007194 - L1MC2 LINE L1 -958 6809 5301 4396 60 2 5 chr10 11309571 11310138 -129006627 - L1PA8 LINE L1 -7 6165 5601 9729 198 58 51 chr10 11310138 11312653 -129004112 - L1MC2 LINE L1 -2466 5301 2544 343 333 40 27 chr10 11312777 11312927 -129003838 + L3 LINE CR1 1417 1568 -9 357 198 47 19 chr10 11314499 11314605 -129002160 + L1MA9 LINE L1 6185 6293 -19 180 305 134 0 chr10 11314890 11314972 -129001793 + MIR3 SINE MIR 111 203 -5 281 219 52 0 chr10 11316032 11316128 -129000637 + (TA)n Simple_repeat Simple_repeat 2 102 0 252 266 53 53 chr10 11316620 11316733 -129000032 + MER5A DNA MER1_type 66 178 -11 403 194 41 20 chr10 11316630 11316728 -129000037 - MER5B DNA MER1_type -62 116 17 240 182 55 0 chr10 11316886 11316941 -128999824 + CT-rich Low_complexity Low_complexity 1 58 0 1144 194 65 50 chr10 11317967 11318008 -128998757 - L1MC4 LINE L1 -6 8036 7997 2034 118 9 41 chr10 11318008 11318323 -128998442 + AluSx SINE Alu 1 305 -7 1144 194 65 50 chr10 11318323 11318621 -128998144 - L1MC4 LINE L1 -45 7997 7692 2158 100 0 32 chr10 11318754 11319063 -128997702 + AluSg SINE Alu 1 299 -11 578 331 139 26 chr10 11319064 11319517 -128997248 - LTR67 LTR ERVL -44 513 10 556 294 34 0 chr10 11319537 11319683 -128997082 - MIR SINE MIR 0 262 112 2263 114 0 3 chr10 11319689 11319996 -128996769 - AluSx SINE Alu -3 309 4 470 122 293 8 chr10 11320113 11320236 -128996529 + L1MC/D LINE L1 5568 5725 -634 4215 220 23 20 chr10 11320253 11321690 -128995075 + L1MD2 LINE L1 4905 6349 -10 1935 151 0 7 chr10 11321889 11322174 -128994591 - AluSx SINE Alu -29 283 1 208 122 0 122 chr10 11324653 11324702 -128992063 - L2 LINE L2 -3 3310 3268 197 329 49 12 chr10 11324752 11324834 -128991931 - L2 LINE L2 -8 3305 3221 463 330 39 17 chr10 11325525 11325758 -128991007 + L2 LINE L2 1503 1740 -1574 1280 281 85 60 chr10 11325759 11326502 -128990263 + L1MEc LINE L1 55 846 -5550 390 68 0 40 chr10 11326502 11326576 -128990189 + (TA)n Simple_repeat Simple_repeat 2 72 0 1280 281 85 60 chr10 11326576 11327123 -128989642 + L1MEc LINE L1 846 1378 -5018 261 288 55 0 chr10 11327157 11327230 -128989535 - MLT1H LTR MaLR -249 300 224 354 234 234 34 chr10 11327365 11327604 -128989161 + L2 LINE L2 3026 3312 -1 1412 200 80 47 chr10 11328772 11329261 -128987504 - Charlie1b DNA MER1_type -2 521 17 903 200 101 37 chr10 11329487 11329817 -128986948 - MER57A LTR ERV1 0 403 113 784 194 7 0 chr10 11329842 11329981 -128986784 - FRAM SINE Alu -39 137 1 1461 201 60 0 chr10 11329998 11330267 -128986498 - AluJb SINE Alu -27 285 1 947 299 65 37 chr10 11331077 11331612 -128985153 - MLT1F1 LTR MaLR -17 550 1 197 291 0 0 chr10 11332018 11332073 -128984692 - L2 LINE L2 -2814 500 446 210 184 0 0 chr10 11332143 11332181 -128984584 - MIR SINE MIR -75 187 150 452 255 0 10 chr10 11332323 11332425 -128984340 + MIR SINE MIR 48 148 -114 604 62 0 12 chr10 11332470 11332551 -128984214 + MADE1 DNA Mariner 1 80 0 1047 265 58 6 chr10 11332640 11332965 -128983800 + MER93a LTR ERV1 61 402 0 253 240 47 108 chr10 11333075 11333204 -128983561 + MIR3 SINE MIR 60 180 -28 1633 226 3 21 chr10 11333304 11333684 -128983081 - MLT1A2 LTR MaLR 0 374 2 2123 119 23 10 chr10 11335224 11335526 -128981239 + AluSx SINE Alu 2 307 -5 1770 117 140 0 chr10 11335568 11335833 -128980932 + AluSq SINE Alu 1 302 -11 1031 209 30 0 chr10 11335977 11336178 -128980587 + MER63A DNA MER1_type 4 210 0 762 268 119 35 chr10 11336993 11337541 -128979224 - MLT1G1 LTR MaLR 0 595 2 257 177 0 16 chr10 11337659 11337721 -128979044 + L1ME3A LINE L1 6109 6169 -1 2130 120 0 10 chr10 11338179 11338471 -128978294 + AluSg SINE Alu 5 293 -17 520 250 42 8 chr10 11338728 11338848 -128977917 + FLAM_A SINE Alu 1 124 -9 423 118 0 40 chr10 11340402 11340478 -128976287 + AluSc SINE Alu 9 81 -228 186 240 0 0 chr10 11340494 11340544 -128976221 + GA-rich Low_complexity Low_complexity 3 52 0 180 0 0 0 chr10 11341550 11341570 -128975195 + (CAA)n Simple_repeat Simple_repeat 2 21 0 22 70 0 0 chr10 11342096 11342139 -128974626 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 11342241 11342269 -128974496 + AT_rich Low_complexity Low_complexity 1 28 0 1647 133 13 74 chr10 11342922 11343231 -128973534 + AluJo SINE Alu 1 290 -22 23 0 0 0 chr10 11343617 11343640 -128973125 + AT_rich Low_complexity Low_complexity 1 23 0 182 128 26 0 chr10 11345753 11345792 -128970973 + (TG)n Simple_repeat Simple_repeat 1 40 0 1789 143 6 16 chr10 11346095 11346444 -128970321 - MER4A LTR ERV1 0 664 261 573 111 10 20 chr10 11346444 11346543 -128970222 - MER4A LTR ERV1 -566 98 1 195 100 0 0 chr10 11346682 11346712 -128970053 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 223 310 169 38 chr10 11348373 11348557 -128968208 - L3b LINE CR1 -6 1577 1370 183 314 78 20 chr10 11348889 11348991 -128967774 - L2 LINE L2 -4 3268 3161 303 296 30 30 chr10 11350038 11350268 -128966497 - HAL1b LINE L1 -646 702 473 22 80 0 0 chr10 11351659 11351709 -128965056 + AT_rich Low_complexity Low_complexity 1 50 0 308 121 35 0 chr10 11352646 11352704 -128964061 + MER116 DNA Mariner 21 80 0 638 196 0 12 chr10 11352768 11352931 -128963834 + CT-rich Low_complexity Low_complexity 2 162 0 2259 119 0 3 chr10 11353857 11354160 -128962605 + AluSg SINE Alu 3 304 -6 959 247 113 14 chr10 11354507 11354892 -128961873 - MLT1D LTR MaLR 0 505 17 22 0 0 0 chr10 11354962 11354984 -128961781 + AT_rich Low_complexity Low_complexity 1 22 0 362 152 0 13 chr10 11354999 11355078 -128961687 + CT-rich Low_complexity Low_complexity 3 80 0 1733 182 7 0 chr10 11355449 11355745 -128961020 + AluJo SINE Alu 1 298 -14 2275 106 3 3 chr10 11356663 11356966 -128959799 - AluSx SINE Alu -9 303 1 220 328 144 55 chr10 11357561 11357887 -128958878 + L2 LINE L2 2918 3272 0 2274 103 0 0 chr10 11359626 11359944 -128956821 + AluSq SINE Alu 1 318 0 418 302 83 29 chr10 11360342 11360547 -128956218 - MIR SINE MIR -14 248 33 421 314 16 37 chr10 11360602 11360837 -128955928 + MIR SINE MIR 3 228 -34 189 261 25 84 chr10 11362030 11362149 -128954616 - MIR SINE MIR -75 187 76 2838 138 26 5 chr10 11362433 11362852 -128953913 - MSTA LTR MaLR 0 428 1 487 268 158 22 chr10 11363895 11364078 -128952687 - MIR SINE MIR -27 235 28 1036 231 78 14 chr10 11364201 11364483 -128952282 + MLT1-int LTR MaLR 357 656 -715 420 238 16 33 chr10 11364530 11364652 -128952113 + L1MEc LINE L1 22 141 -6255 1801 262 20 22 chr10 11364675 11365168 -128951597 + L1MEc LINE L1 121 612 -5784 470 216 0 0 chr10 11365196 11365293 -128951472 + L1MEc LINE L1 2316 2412 -3984 1531 203 69 38 chr10 11365297 11365714 -128951051 + MLT1C LTR MaLR 6 435 -32 366 192 14 14 chr10 11365714 11365787 -128950978 - Tigger5 DNA MER2_type 0 2323 2251 305 218 0 0 chr10 11365756 11365811 -128950954 - Tigger5 DNA MER2_type -2268 55 1 * 4266 198 37 8 chr10 11365845 11366704 -128950061 + MLT1C-int LTR MaLR 1 884 -487 1506 207 25 13 chr10 11366888 11367202 -128949563 + MLT1C-int LTR MaLR 959 1276 -95 545 237 0 0 chr10 11367223 11367337 -128949428 + MLT1C LTR MaLR 353 466 -1 6872 226 74 81 chr10 11367340 11368358 -128948407 + L1MEc LINE L1 2380 3404 -2811 485 227 182 0 chr10 11368358 11368490 -128948275 - MER58C DNA MER1_type 0 215 60 2455 107 169 0 chr10 11368490 11368856 -128947909 - MSTA LTR MaLR 0 428 1 6872 226 74 81 chr10 11368856 11370476 -128946289 + L1MEc LINE L1 3402 5129 -1086 312 137 0 0 chr10 11372573 11372624 -128944141 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 260 368 65 65 chr10 11374190 11374500 -128942265 + L2 LINE L2 2949 3258 -14 251 291 83 126 chr10 11374537 11374911 -128941854 + L2 LINE L2 2915 3272 0 182 299 184 23 chr10 11375446 11375533 -128941232 + MIR SINE MIR 47 147 -115 2133 119 0 25 chr10 11375658 11375976 -128940789 - AluSq SINE Alu -3 310 1 2746 124 3 0 chr10 11377435 11377798 -128938967 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 11378620 11378656 -128938109 + (TG)n Simple_repeat Simple_repeat 2 37 0 1905 164 0 3 chr10 11379600 11379899 -128936866 + AluJo SINE Alu 3 300 -12 309 311 57 0 chr10 11379916 11380022 -128936743 + L2 LINE L2 3151 3262 -10 186 237 26 0 chr10 11381080 11381118 -128935647 - MIR SINE MIR -76 132 94 212 274 39 49 chr10 11381412 11381514 -128935251 + L2 LINE L2 2949 3049 -223 208 241 51 51 chr10 11382396 11382475 -128934290 + L2 LINE L2 2095 2173 -1141 1268 188 4 8 chr10 11384842 11385081 -128931684 + L1MB7 LINE L1 5431 5668 -516 43397 35 23 2 chr10 11385085 11391112 -128925653 + L1PA2 LINE L1 1 6155 0 1725 216 44 33 chr10 11391153 11391603 -128925162 + L1MB7 LINE L1 5652 6106 -78 383 98 0 0 chr10 11391632 11391683 -128925082 - MADE1 DNA Mariner -28 52 2 350 132 0 0 chr10 11391685 11391738 -128925027 + L1MB8 LINE L1 6120 6172 -6 337 298 71 89 chr10 11391755 11392037 -128924728 + L1ME3A LINE L1 5811 6087 -83 923 180 40 110 chr10 11394061 11394361 -128922404 + MLT1D LTR MaLR 82 360 -145 207 321 83 0 chr10 11394487 11394571 -128922194 - MIR SINE MIR -82 180 90 2048 213 68 41 chr10 11395262 11395824 -128920941 - L1ME2 LINE L1 -1 6163 5585 1016 214 77 114 chr10 11395940 11396397 -128920368 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 11399572 11399656 -128917109 + (TA)n Simple_repeat Simple_repeat 1 85 0 2894 10 0 0 chr10 11400808 11401119 -128915646 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 11401171 11401225 -128915540 + (CA)n Simple_repeat Simple_repeat 1 54 0 348 253 140 7 chr10 11402371 11402521 -128914244 - L1ME1 LINE L1 -4 6162 5993 2030 147 7 0 chr10 11402903 11403203 -128913562 + AluSx SINE Alu 1 302 -10 218 349 8 39 chr10 11403392 11403521 -128913244 + MIR SINE MIR 79 203 -59 2222 113 3 0 chr10 11404127 11404429 -128912336 - AluSp SINE Alu -10 303 1 5397 189 27 67 chr10 11404654 11405116 -128911649 - L1MC1 LINE L1 -9 6604 6125 1774 193 10 0 chr10 11405116 11405421 -128911344 + AluJb SINE Alu 3 310 -2 5397 189 27 67 chr10 11405421 11405958 -128910807 - L1MC1 LINE L1 -488 6125 5568 2105 137 0 7 chr10 11405958 11406257 -128910508 - AluSx SINE Alu -15 297 1 5397 189 27 67 chr10 11406257 11407592 -128909173 - L1MC1 LINE L1 -1045 5568 4346 8837 189 71 50 chr10 11407592 11411094 -128905671 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 11411665 11411848 -128904917 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 11413508 11413817 -128902948 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 11413930 11414083 -128902682 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 11414359 11414419 -128902346 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 11414457 11414503 -128902262 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 11414477 11415037 -128901728 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 11415615 11415944 -128900821 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 11418688 11418989 -128897776 + AluJb SINE Alu 1 300 -12 1959 151 47 16 chr10 11420688 11421052 -128895713 + THE1C LTR MaLR 1 375 0 1535 181 27 34 chr10 11422953 11423246 -128893519 + AluJo SINE Alu 1 291 -21 1849 158 137 11 chr10 11423318 11423698 -128893067 - MSTA LTR MaLR 0 428 1 187 268 71 93 chr10 11424756 11424825 -128891940 + MIR SINE MIR 2 71 -191 1982 145 7 3 chr10 11424825 11425121 -128891644 + AluSx SINE Alu 1 297 -15 187 268 71 93 chr10 11425121 11425234 -128891531 + MIR SINE MIR 71 180 -82 40283 34 26 2 chr10 11425234 11431226 -128885539 - L1PA3 LINE L1 -1 6154 12 1405 185 13 75 chr10 11431695 11432025 -128884740 - MLT1A1 LTR MaLR 0 365 61 1680 138 0 23 chr10 11432025 11432285 -128884480 - AluSx SINE Alu -22 290 37 1405 185 13 75 chr10 11432285 11432343 -128884422 - MLT1A1 LTR MaLR -304 61 1 219 360 13 39 chr10 11432543 11432696 -128884069 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 11433154 11433303 -128883462 + (TA)n Simple_repeat Simple_repeat 2 154 0 222 287 267 32 chr10 11433847 11434098 -128882667 - L2 LINE L2 -338 2976 2667 244 336 36 22 chr10 11434592 11434869 -128881896 + MER34 LTR ERV1 1 281 -261 242 298 68 48 chr10 11434881 11435133 -128881632 + MER34 LTR ERV1 257 513 -29 2016 137 0 3 chr10 11436826 11437111 -128879654 - AluSg SINE Alu -26 284 1 630 299 74 17 chr10 11437376 11437607 -128879158 - MIR SINE MIR 0 262 19 356 200 89 22 chr10 11437795 11437885 -128878880 + MER5B DNA MER1_type 80 175 -3 21 0 0 0 chr10 11438750 11438771 -128877994 + AT_rich Low_complexity Low_complexity 1 21 0 1511 211 10 0 chr10 11439136 11439425 -128877340 + AluJo SINE Alu 3 294 -18 21 0 0 0 chr10 11439590 11439611 -128877154 + AT_rich Low_complexity Low_complexity 1 21 0 391 317 8 24 chr10 11440906 11441029 -128875736 - MIR3 SINE MIR -75 133 13 560 333 68 24 chr10 11441662 11441956 -128874809 + L3 LINE CR1 1233 1539 -38 285 278 113 0 chr10 11442468 11442565 -128874200 - MIR3 SINE MIR -6 202 95 195 139 0 0 chr10 11443077 11443113 -128873652 + (CA)n Simple_repeat Simple_repeat 2 37 0 543 190 65 65 chr10 11445216 11445400 -128871365 - MER20 DNA MER1_type 0 219 36 2200 130 0 0 chr10 11445830 11446129 -128870636 + AluSx SINE Alu 4 302 -10 234 0 0 0 chr10 11446375 11446401 -128870364 + (A)n Simple_repeat Simple_repeat 1 26 0 651 315 245 20 chr10 11446542 11447636 -128869129 + L2 LINE L2 1945 3299 -14 2172 138 0 0 chr10 11447980 11448285 -128868480 + AluSx SINE Alu 1 305 -7 1873 157 17 0 chr10 11450491 11450785 -128865980 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr10 11451729 11451750 -128865015 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 11452139 11452167 -128864598 + AT_rich Low_complexity Low_complexity 1 28 0 2381 92 0 0 chr10 11452569 11452872 -128863893 + AluSx SINE Alu 1 303 -9 1873 112 105 4 chr10 11453208 11453485 -128863280 - AluSg SINE Alu -5 305 1 1485 194 0 37 chr10 11453496 11453795 -128862970 - AluJo SINE Alu -24 288 1 596 250 127 42 chr10 11453868 11454080 -128862685 + MIR SINE MIR 30 259 -3 240 210 81 0 chr10 11454407 11454469 -128862296 + MIR SINE MIR 128 194 -68 21 57 0 0 chr10 11455816 11455851 -128860914 + AT_rich Low_complexity Low_complexity 1 35 0 1694 154 9 49 chr10 11456248 11456572 -128860193 + AluJo SINE Alu 1 311 -1 247 268 0 0 chr10 11458473 11458529 -128858236 + MIR SINE MIR 92 147 -61 252 184 0 0 chr10 11458558 11458607 -128858158 + AluSp SINE Alu 120 168 -135 2235 116 0 7 chr10 11458607 11458910 -128857855 + AluSg SINE Alu 7 307 -3 248 355 18 34 chr10 11459806 11459987 -128856778 + MIR3 SINE MIR 9 190 -72 29 0 0 0 chr10 11460049 11460078 -128856687 + AT_rich Low_complexity Low_complexity 1 29 0 1306 239 46 19 chr10 11460488 11460857 -128855908 - L1MDa LINE L1 -6127 413 35 2197 139 89 5 chr10 11461025 11461420 -128855345 - MSTA LTR MaLR 0 428 1 2454 84 0 0 chr10 11461722 11462033 -128854732 + AluY SINE Alu 1 311 0 271 328 151 63 chr10 11462103 11462385 -128854380 - L2 LINE L2 -2 3270 2953 2227 101 0 47 chr10 11462385 11462702 -128854063 + AluSg SINE Alu 1 302 -8 271 328 151 63 chr10 11462702 11462751 -128854014 - L2 LINE L2 -319 2953 2910 1170 149 19 37 chr10 11463802 11464016 -128852749 + AluSg/x SINE Alu 85 294 -18 2316 115 0 0 chr10 11464422 11464726 -128852039 + AluSx SINE Alu 1 304 -8 285 335 88 16 chr10 11464881 11465200 -128851565 + MLT1I LTR MaLR 18 359 -50 288 0 0 0 chr10 11465471 11465503 -128851262 + (CA)n Simple_repeat Simple_repeat 2 33 0 434 259 114 34 chr10 11466445 11466708 -128850057 + LTR43 LTR ERV1 187 470 -132 2367 99 0 0 chr10 11466748 11467051 -128849714 - AluSx SINE Alu -9 303 1 1996 145 34 26 chr10 11467742 11468094 -128848671 - THE1B LTR MaLR 0 364 10 1081 198 120 46 chr10 11468109 11468569 -128848196 - MER69 DNA AcHobo -23 2503 2010 * 1175 305 74 27 chr10 11468567 11469001 -128847764 - MER69 DNA AcHobo -658 568 105 439 268 9 0 chr10 11469001 11469113 -128847652 - MER81 DNA DNA 0 114 2 1175 305 74 27 chr10 11469113 11469193 -128847572 - MER69 DNA AcHobo -1121 105 30 186 311 106 26 chr10 11469887 11470038 -128846727 - L3b LINE CR1 -199 1384 1222 421 281 23 23 chr10 11470201 11470329 -128846436 + MIR3 SINE MIR 66 193 -15 419 51 0 17 chr10 11470579 11470638 -128846127 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 273 169 0 0 chr10 11470793 11470852 -128845913 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr10 11471208 11471243 -128845522 + AT_rich Low_complexity Low_complexity 1 35 0 211 338 12 0 chr10 11472089 11472169 -128844596 + L2 LINE L2 2709 2789 -525 466 363 48 35 chr10 11472236 11472550 -128844215 + L1ME LINE L1 5501 5818 -303 1029 220 17 9 chr10 11472555 11472787 -128843978 + L1MC3 LINE L1 7137 7370 -415 295 129 177 0 chr10 11472791 11472853 -128843912 - L1MA9 LINE L1 -2 6310 6238 1238 167 26 0 chr10 11472854 11473087 -128843678 + L1MC3 LINE L1 7356 7594 -191 829 165 71 6 chr10 11473088 11473270 -128843495 + L1MC2 LINE L1 6138 6331 -13 207 232 18 0 chr10 11473382 11473438 -128843327 + (TA)n Simple_repeat Simple_repeat 2 58 0 1453 195 15 9 chr10 11473670 11473998 -128842767 - L1MD3 LINE L1 -13 7982 7653 * 2083 151 17 85 chr10 11473995 11474618 -128842147 - L1MA9 LINE L1 -704 5479 4885 * 3159 193 24 46 chr10 11474615 11475434 -128841331 + L1MA9 LINE L1 5474 6274 -38 2188 79 59 0 chr10 11475458 11475748 -128841017 + AluSc SINE Alu 1 307 -2 1875 195 95 21 chr10 11475748 11476307 -128840458 - L1MC4a LINE L1 -318 7490 6891 941 188 41 10 chr10 11476320 11476517 -128840248 + MER6B DNA MER2_type 8 210 0 1103 212 0 0 chr10 11476578 11476771 -128839994 + AluJo SINE Alu 5 197 -115 268 271 112 28 chr10 11477233 11477340 -128839425 - L2 LINE L2 0 3272 3157 195 69 0 0 chr10 11479341 11479370 -128837395 + (A)n Simple_repeat Simple_repeat 1 29 0 414 315 30 56 chr10 11481473 11481670 -128835095 - L2 LINE L2 -4 3309 3118 1443 78 0 21 chr10 11481948 11482139 -128834626 - AluY SINE Alu -26 285 99 2270 125 27 20 chr10 11482198 11482606 -128834159 + L1MA4A LINE L1 5890 6300 -3 513 285 114 63 chr10 11482639 11482694 -128834071 - L2 LINE L2 -574 2740 2689 2365 107 0 0 chr10 11482694 11483004 -128833761 + AluY SINE Alu 1 310 -1 513 285 114 63 chr10 11483004 11483394 -128833371 - L2 LINE L2 -625 2689 2272 523 275 91 6 chr10 11483725 11484078 -128832687 + L1ME4a LINE L1 5710 6092 -29 2330 109 0 0 chr10 11484229 11484532 -128832233 + AluSc SINE Alu 1 303 -6 221 262 16 16 chr10 11484686 11484747 -128832018 - MIR SINE MIR -5 257 197 2414 94 0 3 chr10 11486636 11486945 -128829820 + AluSc SINE Alu 1 308 -1 207 0 0 0 chr10 11487030 11487053 -128829712 + (A)n Simple_repeat Simple_repeat 1 23 0 435 249 57 11 chr10 11487215 11487392 -128829373 - MER112 DNA MER1_type -6 254 70 279 0 0 0 chr10 11487527 11487558 -128829207 + (TG)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr10 11488289 11488313 -128828452 + (T)n Simple_repeat Simple_repeat 1 24 0 1724 189 0 23 chr10 11488371 11488673 -128828092 - AluJo SINE Alu -11 301 7 28 91 0 0 chr10 11489001 11489078 -128827687 + AT_rich Low_complexity Low_complexity 1 77 0 327 302 146 30 chr10 11489087 11489355 -128827410 + L1ME3A LINE L1 5304 5602 -564 329 283 108 0 chr10 11489367 11489579 -128827186 + L1ME3A LINE L1 5651 5885 -236 195 42 0 0 chr10 11490262 11490286 -128826479 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11490491 11490553 -128826212 + (TG)n Simple_repeat Simple_repeat 2 64 0 404 292 73 7 chr10 11491259 11491396 -128825369 - L2 LINE L2 -6 3307 3162 262 255 49 0 chr10 11491972 11492074 -128824691 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1304 252 66 22 chr10 11492075 11492601 -128824164 - MLT2F LTR ERVL -60 603 9 288 293 61 77 chr10 11492624 11492805 -128823960 - L2 LINE L2 -188 3084 2907 554 299 57 30 chr10 11492815 11493037 -128823728 - MER90 LTR ERV1 -13 601 368 1612 162 114 11 chr10 11493037 11493388 -128823377 + MLT1B LTR MaLR 4 390 0 554 299 57 30 chr10 11493388 11493463 -128823302 - MER90 LTR ERV1 -246 368 296 1498 155 55 134 chr10 11493744 11494073 -128822692 + Charlie3 DNA MER1_type 37 2712 0 189 362 0 0 chr10 11494405 11494452 -128822313 + L2 LINE L2 3139 3185 -87 326 325 177 28 chr10 11494690 11495107 -128821658 - L2 LINE L2 -243 3029 2546 412 209 43 26 chr10 11495231 11495346 -128821419 + L1ME3A LINE L1 6053 6169 -1 200 290 21 11 chr10 11496415 11496508 -128820257 + MIR SINE MIR 60 153 -109 320 153 0 9 chr10 11496551 11496622 -128820143 + FAM SINE Alu 115 174 -1 2587 84 31 6 chr10 11497154 11497509 -128819256 + THE1B LTR MaLR 1 364 0 485 286 95 24 chr10 11498536 11498704 -128818061 - L2 LINE L2 0 3313 3134 980 188 0 0 chr10 11498754 11498914 -128817851 + FRAM SINE Alu 4 163 -3 2184 114 35 44 chr10 11501317 11501684 -128815081 - THE1B LTR MaLR 0 364 1 222 289 39 78 chr10 11501891 11502019 -128814746 + MIR SINE MIR 94 216 -46 217 261 90 27 chr10 11502878 11502989 -128813776 - MIR SINE MIR -110 152 35 321 89 0 0 chr10 11503701 11503746 -128813019 + (TG)n Simple_repeat Simple_repeat 2 46 0 382 65 32 0 chr10 11504529 11504591 -128812174 + (GA)n Simple_repeat Simple_repeat 2 65 0 321 68 0 0 chr10 11508601 11508645 -128808120 + (TG)n Simple_repeat Simple_repeat 1 44 0 346 208 87 54 chr10 11509763 11509912 -128806853 - MIR SINE MIR -28 234 81 23 0 0 0 chr10 11510733 11510756 -128806009 + AT_rich Low_complexity Low_complexity 1 23 0 196 261 43 0 chr10 11512132 11512178 -128804587 - L2 LINE L2 -20 3252 3205 210 246 18 18 chr10 11512486 11512543 -128804222 + GA-rich Low_complexity Low_complexity 1 57 0 203 260 0 0 chr10 11516037 11516087 -128800678 + (TATG)n Simple_repeat Simple_repeat 2 51 0 333 241 102 139 chr10 11516818 11517287 -128799478 - L1M2 LINE L1 -5842 1007 556 21 57 0 0 chr10 11517302 11517337 -128799428 + GC_rich Low_complexity Low_complexity 1 35 0 424 293 122 57 chr10 11517433 11518059 -128798706 - L1M2 LINE L1 -5446 1403 833 26 0 0 0 chr10 11520512 11520538 -128796227 + AT_rich Low_complexity Low_complexity 1 26 0 374 261 76 0 chr10 11520698 11520790 -128795975 - MIR3 SINE MIR -19 189 91 248 234 147 0 chr10 11520895 11520979 -128795786 - MIR SINE MIR -61 147 57 1877 134 14 0 chr10 11523572 11523849 -128792916 + AluSx SINE Alu 1 281 -31 252 59 0 0 chr10 11523857 11523891 -128792874 + (TAA)n Simple_repeat Simple_repeat 1 34 0 333 68 0 0 chr10 11524457 11524501 -128792264 + (TG)n Simple_repeat Simple_repeat 1 44 0 2183 156 24 24 chr10 11524532 11524905 -128791860 + THE1C LTR MaLR 3 375 0 190 121 30 30 chr10 11525852 11525885 -128790880 - L3 LINE CR1 -508 1069 1037 2451 90 0 3 chr10 11527656 11527967 -128788798 - AluSg SINE Alu 0 310 1 2031 129 27 7 chr10 11527967 11528262 -128788503 - AluSx SINE Alu -11 301 1 213 355 74 8 chr10 11529474 11529595 -128787170 - MIR SINE MIR -27 235 107 225 0 0 0 chr10 11531395 11531420 -128785345 + (A)n Simple_repeat Simple_repeat 1 25 0 473 217 0 11 chr10 11531584 11531676 -128785089 + FLAM_A SINE Alu 1 91 -51 2266 94 10 0 chr10 11532506 11532805 -128783960 - AluSp SINE Alu -11 302 1 471 254 25 8 chr10 11534209 11534327 -128782438 - MER94 DNA DNA -13 121 2 2504 121 31 11 chr10 11536296 11536652 -128780113 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11537089 11537111 -128779654 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11539846 11539916 -128776849 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11540034 11540090 -128776675 + AT_rich Low_complexity Low_complexity 1 56 0 1686 219 44 19 chr10 11540185 11540546 -128776219 - MLT1A2 LTR MaLR 0 374 5 2887 185 65 19 chr10 11541782 11542425 -128774340 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11542451 11542552 -128774213 - MIR SINE MIR -67 141 31 1014 288 191 24 chr10 11542684 11543615 -128773150 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11544395 11544495 -128772270 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11544511 11544645 -128772120 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11544678 11544828 -128771937 + MIR SINE MIR 102 262 0 564 202 23 81 chr10 11545414 11545587 -128771178 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11545605 11545664 -128771101 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11546615 11546718 -128770047 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11546749 11546790 -128769975 - MER5A DNA MER1_type -148 41 1 26 30 0 0 chr10 11548797 11548830 -128767935 + AT_rich Low_complexity Low_complexity 1 33 0 333 311 120 58 chr10 11550773 11551014 -128765751 - L2 LINE L2 0 3272 3017 979 169 25 129 chr10 11551135 11551460 -128765305 - AluY SINE Alu -10 301 11 2301 103 44 3 chr10 11552491 11552830 -128763935 - THE1B LTR MaLR -11 353 1 388 356 8 0 chr10 11553234 11553352 -128763413 - L2 LINE L2 -3 3269 3151 17354 54 12 0 chr10 11555506 11558865 -128757900 - L1PA6 LINE L1 -1 6153 2766 205 320 55 55 chr10 11563099 11563299 -128753466 + L2 LINE L2 3072 3271 -1 279 293 24 49 chr10 11564413 11564536 -128752229 + MER5A DNA MER1_type 7 126 -63 308 289 10 10 chr10 11564590 11564687 -128752078 - L2 LINE L2 -3 3269 3173 2139 114 3 13 chr10 11564928 11565255 -128751510 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11565406 11565430 -128751335 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11565630 11565719 -128751046 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 393 300 110 13 chr10 11566020 11566257 -128750508 + MIR SINE MIR 3 262 0 874 177 6 12 chr10 11568845 11569009 -128747756 - FRAM SINE Alu 0 166 4 1745 171 7 7 chr10 11569341 11569634 -128747131 + AluJo SINE Alu 1 293 -19 222 299 26 13 chr10 11569666 11569743 -128747022 - L2 LINE L2 -2 3311 3234 180 0 0 0 chr10 11570998 11571018 -128745747 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 2409 61 3 3 chr10 11571018 11571311 -128745454 + AluY SINE Alu 9 301 -10 21 0 0 0 chr10 11573188 11573209 -128743556 + AT_rich Low_complexity Low_complexity 1 21 0 2054 145 7 0 chr10 11573219 11573529 -128743236 + AluJb SINE Alu 1 312 0 279 0 0 0 chr10 11577451 11577482 -128739283 + (CA)n Simple_repeat Simple_repeat 2 32 0 2033 148 3 0 chr10 11577680 11577977 -128738788 - AluSx SINE Alu -14 298 1 230 355 100 0 chr10 11580914 11581024 -128735741 + L2 LINE L2 3147 3267 -5 360 276 112 45 chr10 11585006 11585274 -128731491 + L2 LINE L2 3028 3313 0 272 347 40 8 chr10 11586175 11586299 -128730466 + L2 LINE L2 3127 3254 -18 465 296 80 0 chr10 11588782 11588944 -128727821 - MIR3 SINE MIR -4 204 30 486 179 250 0 chr10 11589102 11589214 -128727551 - MER3 DNA MER1_type -46 163 24 190 294 0 15 chr10 11590206 11590274 -128726491 + L2 LINE L2 3239 3305 -8 180 162 27 0 chr10 11591486 11591523 -128725242 - MIR SINE MIR -114 148 111 181 307 200 0 chr10 11595381 11595456 -128721309 + MIR3 SINE MIR 111 200 -8 25 0 0 0 chr10 11595873 11595898 -128720867 + AT_rich Low_complexity Low_complexity 1 25 0 641 274 28 14 chr10 11596365 11596577 -128720188 - MIR SINE MIR -14 248 34 304 324 9 19 chr10 11597586 11597691 -128719074 + MIR SINE MIR 6 109 -153 235 333 0 0 chr10 11604427 11604490 -128712275 - L2 LINE L2 -24 3248 3186 199 296 0 0 chr10 11605206 11605260 -128711505 + MIR SINE MIR 200 253 -9 183 234 85 0 chr10 11607607 11607654 -128709111 - MIR SINE MIR -112 150 100 199 329 27 0 chr10 11608189 11608262 -128708503 - L2 LINE L2 -4 3268 3194 297 314 160 0 chr10 11608890 11609084 -128707681 + MIR SINE MIR 2 226 -36 514 308 23 90 chr10 11609267 11609475 -128707290 - MIR SINE MIR 0 262 72 1951 135 4 0 chr10 11609475 11609777 -128706988 - AluSq SINE Alu 0 303 1 514 308 23 90 chr10 11609777 11609832 -128706933 - MIR SINE MIR -190 72 15 206 300 67 0 chr10 11609974 11610034 -128706731 + L2 LINE L2 3200 3263 -9 208 294 166 25 chr10 11611383 11611546 -128705219 + L2 LINE L2 2409 2594 -720 731 239 0 0 chr10 11611561 11611577 -128705188 - L1MA10 LINE L1 -1 6333 6318 8890 234 67 58 chr10 11611577 11613782 -128702983 - L1ME1 LINE L1 -8 6227 4045 1003 187 0 0 chr10 11613782 11613948 -128702817 - FRAM SINE Alu -12 164 1 8890 234 67 58 chr10 11613948 11614040 -128702725 - L1ME1 LINE L1 -2190 4045 3955 2121 110 4 0 chr10 11614040 11614321 -128702444 - AluSp SINE Alu -31 282 1 8890 234 67 58 chr10 11614321 11615225 -128701540 - L1ME1 LINE L1 -2280 3955 3061 1289 161 63 5 chr10 11615225 11615448 -128701317 + MER46A DNA MER2_type 1 236 0 8890 234 67 58 chr10 11615448 11616724 -128700041 - L1ME1 LINE L1 -3174 3061 1555 2278 91 3 0 chr10 11616724 11617010 -128699755 - AluSp SINE Alu -24 289 3 8890 234 67 58 chr10 11617010 11617698 -128699067 - L1ME1 LINE L1 -4680 1555 875 484 255 215 10 chr10 11617679 11617879 -128698886 - L1ME1 LINE L1 -5766 630 390 * 756 236 31 24 chr10 11617865 11618122 -128698643 - L1MEc LINE L1 -3814 2438 2183 434 240 164 0 chr10 11618144 11618290 -128698475 - L1ME1 LINE L1 -6013 383 214 200 422 104 6 chr10 11618688 11618861 -128697904 + L2 LINE L2 3065 3254 -18 243 0 0 0 chr10 11619383 11619410 -128697355 + (A)n Simple_repeat Simple_repeat 1 27 0 921 209 15 5 chr10 11619419 11619625 -128697140 + L1MB3 LINE L1 5911 6118 -65 200 211 58 0 chr10 11619695 11619747 -128697018 + MIR SINE MIR 91 145 -117 2517 118 31 11 chr10 11621505 11621861 -128694904 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11622298 11622320 -128694445 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11625058 11625128 -128691637 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11625246 11625302 -128691463 + AT_rich Low_complexity Low_complexity 1 56 0 1706 216 44 19 chr10 11625397 11625758 -128691007 - MLT1A2 LTR MaLR 0 374 5 2903 184 65 19 chr10 11626994 11627637 -128689128 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11627663 11627764 -128689001 - MIR SINE MIR -67 141 31 1004 289 191 24 chr10 11627896 11628827 -128687938 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11629608 11629708 -128687057 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11629724 11629858 -128686907 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11629891 11630041 -128686724 + MIR SINE MIR 102 262 0 582 196 23 81 chr10 11630630 11630803 -128685962 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11630821 11630880 -128685885 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11631831 11631934 -128684831 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11631965 11632006 -128684759 - MER5A DNA MER1_type -148 41 1 216 0 0 0 chr10 11634015 11634039 -128682726 + (A)n Simple_repeat Simple_repeat 1 24 0 333 311 120 58 chr10 11635996 11636237 -128680528 - L2 LINE L2 0 3272 3017 942 173 25 130 chr10 11636358 11636682 -128680083 - AluY SINE Alu -11 300 11 2620 59 0 0 chr10 11638065 11638370 -128678395 - AluY SINE Alu -6 305 1 187 174 0 87 chr10 11638605 11638651 -128678114 + MIR SINE MIR 221 262 0 369 43 0 0 chr10 11638932 11638979 -128677786 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 17 0 chr10 11639183 11639471 -128677294 - AluSx SINE Alu -19 293 1 191 288 0 34 chr10 11640022 11640081 -128676684 + L3 LINE CR1 1513 1569 -8 2342 95 0 19 chr10 11642906 11643222 -128673543 - AluSx SINE Alu 0 312 3 252 0 0 0 chr10 11643226 11643254 -128673511 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1428 209 0 7 chr10 11643266 11643539 -128673226 - AluJo SINE Alu -41 271 1 190 308 67 29 chr10 11643541 11643645 -128673120 - MIR SINE MIR -119 143 36 13726 147 45 29 chr10 11645036 11646264 -128670501 + Tigger1 DNA MER2_type 1 1207 -1211 2074 113 3 7 chr10 11646264 11646555 -128670210 - AluSx SINE Alu -9 303 14 13726 147 45 29 chr10 11646555 11647703 -128669062 + Tigger1 DNA MER2_type 1207 2416 -2 180 259 0 35 chr10 11647900 11647958 -128668807 - MIR SINE MIR -2 260 205 280 330 19 28 chr10 11648215 11648321 -128668444 + MER5B DNA MER1_type 3 107 -71 600 247 79 82 chr10 11650129 11650646 -128666119 - L2 LINE L2 -70 3243 2722 372 308 81 19 chr10 11650779 11650990 -128665775 - MIR SINE MIR -25 237 14 431 304 38 22 chr10 11652183 11652329 -128664436 + MIR SINE MIR 8 154 -64 421 308 98 66 chr10 11652582 11652865 -128663900 - L2 LINE L2 -22 3291 3019 6155 190 82 26 chr10 11652865 11653018 -128663747 + Looper DNA T2_type 1 144 -1414 2486 70 0 0 chr10 11653018 11653316 -128663449 - AluY SINE Alu -13 298 1 6155 190 82 26 chr10 11653316 11654638 -128662127 + Looper DNA T2_type 144 1558 0 421 308 98 66 chr10 11654638 11654921 -128661844 - L2 LINE L2 -294 3019 2696 535 314 73 58 chr10 11654937 11655487 -128661278 - L2 LINE L2 -1005 2309 1752 581 208 52 32 chr10 11655762 11655916 -128660849 - MIR SINE MIR -59 203 47 265 214 57 14 chr10 11657992 11658062 -128658703 - MIR SINE MIR 0 262 190 475 296 123 6 chr10 11661398 11661560 -128655205 + MIR3 SINE MIR 6 186 -22 1965 133 91 28 chr10 11663844 11664197 -128652568 + THE1C LTR MaLR 1 375 0 487 234 168 24 chr10 11664517 11664684 -128652081 + MIR SINE MIR 16 206 -56 194 250 0 39 chr10 11664792 11664844 -128651921 + L2 LINE L2 3217 3266 -6 521 251 43 53 chr10 11666932 11667119 -128649646 + MIR3 SINE MIR 23 207 -1 485 327 75 9 chr10 11668142 11668356 -128648409 + MIR SINE MIR 13 240 -22 397 331 82 6 chr10 11669664 11669818 -128646947 - MIR3 SINE MIR -35 173 5 489 233 128 23 chr10 11669968 11670140 -128646625 - MIR SINE MIR -46 216 27 425 215 28 19 chr10 11670372 11670479 -128646286 + MIR SINE MIR 109 216 -46 288 0 0 0 chr10 11671035 11671067 -128645698 + (A)n Simple_repeat Simple_repeat 1 32 0 186 346 0 0 chr10 11672454 11672506 -128644259 - L2 LINE L2 -21 3292 3241 246 388 70 22 chr10 11672697 11673009 -128643756 - L2 LINE L2 -338 2976 2650 1277 252 88 39 chr10 11673130 11673714 -128643051 - MLT1G LTR MaLR -13 577 1 3125 145 21 15 chr10 11674134 11674657 -128642108 + L1PA16 LINE L1 5641 6166 0 425 287 0 0 chr10 11675042 11675157 -128641608 + L1ME LINE L1 5706 5820 -301 1316 223 97 5 chr10 11676248 11676629 -128640136 - LTR37B LTR ERV1 0 468 53 896 185 209 24 chr10 11676853 11677107 -128639658 - MER39 LTR ERV1 0 707 407 374 241 92 52 chr10 11677077 11677251 -128639514 - MER34 LTR ERV1 -295 247 67 * 27 29 0 0 chr10 11677844 11677878 -128638887 + AT_rich Low_complexity Low_complexity 1 34 0 189 74 0 0 chr10 11684341 11684368 -128632397 + (A)n Simple_repeat Simple_repeat 1 27 0 1926 129 0 11 chr10 11684375 11684701 -128632064 + AluSx SINE Alu 1 323 0 349 88 35 0 chr10 11684834 11684891 -128631874 - L1PB2 LINE L1 -2 6149 6091 640 316 53 32 chr10 11685519 11685896 -128630869 - L2 LINE L2 -780 2534 2150 190 312 233 20 chr10 11687252 11687505 -128629260 + L2 LINE L2 2450 2756 -558 187 263 35 35 chr10 11687717 11687774 -128628991 + L2 LINE L2 2992 3048 -224 180 0 0 0 chr10 11687944 11687964 -128628801 + (T)n Simple_repeat Simple_repeat 1 20 0 364 270 32 40 chr10 11687965 11688091 -128628674 + MIR SINE MIR 81 205 -57 1596 184 32 0 chr10 11688872 11689150 -128627615 + AluJb SINE Alu 8 294 -18 504 288 34 77 chr10 11689667 11689900 -128626865 + MIR SINE MIR 15 237 -25 2111 130 0 7 chr10 11690643 11690993 -128625772 - AluSx SINE Alu 0 312 1 201 230 22 37 chr10 11692238 11692373 -128624392 + CT-rich Low_complexity Low_complexity 1 133 0 296 185 0 37 chr10 11692459 11692567 -128624198 + CT-rich Low_complexity Low_complexity 2 105 0 493 254 136 18 chr10 11693108 11693387 -128623378 - L1M2 LINE L1 -732 5565 5254 255 316 76 41 chr10 11693904 11694075 -128622690 - MIR3 SINE MIR -14 194 18 1720 156 0 49 chr10 11694433 11694741 -128622024 + AluJo SINE Alu 1 293 -19 285 253 10 50 chr10 11699386 11699485 -128617280 + L2 LINE L2 3219 3313 0 871 305 28 0 chr10 11701311 11701560 -128615205 - MIR SINE MIR -5 257 2 258 298 164 0 chr10 11701694 11701798 -128614967 + MIR SINE MIR 34 154 -108 704 152 0 18 chr10 11702812 11702924 -128613841 - FLAM_C SINE Alu -32 111 2 275 305 38 23 chr10 11702988 11703113 -128613652 - MIR SINE MIR -51 157 39 289 252 96 26 chr10 11703276 11703391 -128613374 + MIR SINE MIR 24 146 -62 27 62 0 0 chr10 11704053 11704101 -128612664 + AT_rich Low_complexity Low_complexity 1 48 0 256 264 47 9 chr10 11704347 11704453 -128612312 - L1MB8 LINE L1 -12 6166 6057 196 289 0 40 chr10 11704548 11704624 -128612141 - L2 LINE L2 -1 3271 3199 386 258 77 33 chr10 11705944 11706126 -128610639 - L2 LINE L2 -5 3308 3119 1987 143 3 16 chr10 11707691 11708006 -128608759 - AluJo SINE Alu -1 311 1 2501 108 40 3 chr10 11708333 11708684 -128608081 - THE1B LTR MaLR 0 364 1 388 356 8 0 chr10 11709088 11709206 -128607559 - L2 LINE L2 -3 3269 3151 21493 54 9 0 chr10 11711358 11714715 -128602050 - L1PA6 LINE L1 -3 6151 2766 261 315 55 55 chr10 11718948 11719148 -128597617 + L2 LINE L2 3072 3271 -1 313 293 24 49 chr10 11720262 11720385 -128596380 + MER5A DNA MER1_type 7 126 -63 338 289 10 10 chr10 11720439 11720536 -128596229 - L2 LINE L2 -3 3269 3173 184 342 88 18 chr10 11720643 11720757 -128596008 - L2 LINE L2 -12 3301 3180 2117 114 3 13 chr10 11720777 11721104 -128595661 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11721255 11721279 -128595486 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11721479 11721568 -128595197 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 297 314 160 0 chr10 11721912 11722106 -128594659 + MIR SINE MIR 2 226 -36 514 308 23 90 chr10 11722289 11722497 -128594268 - MIR SINE MIR 0 262 72 1951 135 4 0 chr10 11722497 11722799 -128593966 - AluSq SINE Alu 0 303 1 514 308 23 90 chr10 11722799 11722854 -128593911 - MIR SINE MIR -190 72 15 206 300 67 0 chr10 11722996 11723056 -128593709 + L2 LINE L2 3200 3263 -9 208 294 166 25 chr10 11724405 11724568 -128592197 + L2 LINE L2 2409 2594 -720 731 239 0 0 chr10 11724583 11724599 -128592166 - L1MA10 LINE L1 -1 6333 6318 5253 241 61 8 chr10 11724599 11726804 -128589961 - L1ME1 LINE L1 -8 6227 3918 1018 181 0 0 chr10 11726804 11726970 -128589795 - FRAM SINE Alu -12 164 1 4650 242 83 39 chr10 11726971 11727062 -128589703 - L1ME1 LINE L1 -2294 3921 3835 2149 103 4 0 chr10 11727062 11727343 -128589422 - AluSp SINE Alu -31 282 1 4650 242 83 39 chr10 11727343 11728248 -128588517 - L1ME1 LINE L1 -2380 3835 2971 1289 161 63 5 chr10 11728248 11728471 -128588294 + MER46A DNA MER2_type 1 236 0 4650 242 83 39 chr10 11728471 11729748 -128587017 - L1ME1 LINE L1 -3244 2971 1532 2278 91 3 0 chr10 11729748 11730034 -128586731 - AluSp SINE Alu -24 289 3 4650 242 83 39 chr10 11730034 11730722 -128586043 - L1ME1 LINE L1 -4683 1532 875 484 255 215 10 chr10 11730703 11730903 -128585862 - L1ME1 LINE L1 -5766 630 390 * 760 236 31 24 chr10 11730889 11731146 -128585619 - L1MEc LINE L1 -3814 2438 2183 434 240 164 0 chr10 11731168 11731314 -128585451 - L1ME1 LINE L1 -6013 383 214 200 422 104 6 chr10 11731712 11731885 -128584880 + L2 LINE L2 3065 3254 -18 252 0 0 0 chr10 11732407 11732435 -128584330 + (A)n Simple_repeat Simple_repeat 1 28 0 921 209 15 5 chr10 11732444 11732650 -128584115 + L1MB3 LINE L1 5911 6118 -65 200 211 58 0 chr10 11732720 11732772 -128583993 + MIR SINE MIR 91 145 -117 501 285 55 30 chr10 11734372 11734537 -128582228 - MER5B DNA MER1_type -3 175 7 2403 93 0 0 chr10 11735692 11735994 -128580771 - AluSc SINE Alu -7 302 1 1411 154 75 19 chr10 11738010 11738277 -128578488 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr10 11738280 11738309 -128578456 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2219 77 0 11 chr10 11738309 11738727 -128578038 + AluSg SINE Alu 4 418 0 443 311 29 66 chr10 11742780 11743021 -128573744 - MLT1J2 LTR MaLR -118 332 101 459 0 0 0 chr10 11744347 11744398 -128572367 + (TC)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr10 11744397 11744418 -128572347 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 299 321 18 0 chr10 11745471 11745583 -128571182 - MER94 DNA DNA -19 115 2 3496 152 27 55 chr10 11749742 11750413 -128566352 - MER39B LTR ERV1 0 653 2 559 146 0 10 chr10 11752372 11752468 -128564297 + L1MA4A LINE L1 6209 6303 0 1474 204 7 14 chr10 11752523 11752817 -128563948 + AluJo SINE Alu 1 292 -20 393 158 0 0 chr10 11753282 11753383 -128563382 + (TG)n Simple_repeat Simple_repeat 2 102 0 189 0 0 0 chr10 11754264 11754285 -128562480 + (T)n Simple_repeat Simple_repeat 1 21 0 1679 167 17 10 chr10 11755528 11755821 -128560944 + AluJo SINE Alu 1 295 -17 467 341 42 0 chr10 11755951 11756118 -128560647 + MER91A DNA MER1_type 1 174 -22 302 282 0 13 chr10 11764325 11764403 -128552362 - L2 LINE L2 0 3313 3237 297 314 41 59 chr10 11768573 11768731 -128548034 - MIR SINE MIR -62 146 31 387 0 0 0 chr10 11768997 11769040 -128547725 + (CA)n Simple_repeat Simple_repeat 1 43 0 225 263 95 21 chr10 11770807 11770902 -128545863 - MIR SINE MIR -2 260 159 243 0 0 0 chr10 11771270 11771297 -128545468 + (A)n Simple_repeat Simple_repeat 1 27 0 393 263 39 58 chr10 11771568 11771724 -128545041 - MIR3 SINE MIR -35 173 21 733 178 33 44 chr10 11772210 11772331 -128544434 + MER5B DNA MER1_type 1 121 -57 2122 124 24 0 chr10 11772331 11772622 -128544143 - AluSx SINE Alu -14 298 1 733 178 33 44 chr10 11772622 11772680 -128544085 + MER5B DNA MER1_type 121 178 0 249 207 23 58 chr10 11772825 11772912 -128543853 + MER5A DNA MER1_type 31 114 -75 505 192 75 11 chr10 11772923 11773049 -128543716 + L1MA9 LINE L1 6152 6288 -3 970 128 19 162 chr10 11774533 11774799 -128541966 - LOR1-int LTR ERV1 -3623 4497 4270 2027 25 0 0 chr10 11774813 11775049 -128541716 - L1PA4 LINE L1 -2 6153 5918 275 336 52 19 chr10 11776176 11776387 -128540378 + L2 LINE L2 2105 2322 -992 233 281 0 16 chr10 11777097 11777161 -128539604 + L2 LINE L2 3209 3271 -1 2473 66 7 0 chr10 11777220 11777521 -128539244 + AluY SINE Alu 1 303 -8 334 325 57 6 chr10 11777752 11777909 -128538856 - MIR SINE MIR -52 210 46 203 152 22 0 chr10 11777941 11777987 -128538778 + A-rich Low_complexity Low_complexity 2 48 0 261 172 0 103 chr10 11779473 11779560 -128537205 + MER116 DNA Mariner 3 80 0 327 175 0 0 chr10 11780690 11780747 -128536018 - MADE1 DNA Mariner -23 57 1 189 0 0 0 chr10 11781993 11782014 -128534751 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1960 112 29 4 chr10 11782599 11782877 -128533888 + AluSq SINE Alu 6 290 -23 381 161 21 11 chr10 11783741 11783834 -128532931 + MIR SINE MIR 39 132 -130 2137 134 0 0 chr10 11784021 11784313 -128532452 - AluSx SINE Alu -20 292 1 2404 70 0 20 chr10 11787185 11787486 -128529279 + AluY SINE Alu 1 295 -16 218 345 121 18 chr10 11788704 11788869 -128527896 + MIR3 SINE MIR 4 185 -23 287 320 82 35 chr10 11789820 11790076 -128526689 + L2 LINE L2 2550 2817 -497 212 186 17 0 chr10 11791222 11791281 -128525484 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 11791435 11791462 -128525303 + AT_rich Low_complexity Low_complexity 1 27 0 512 282 60 13 chr10 11791515 11791664 -128525101 - MIR SINE MIR -50 212 57 221 241 56 0 chr10 11791694 11791748 -128525017 - MIR SINE MIR -188 74 18 585 192 75 0 chr10 11793047 11793167 -128523598 + FLAM_A SINE Alu 8 136 -6 209 250 0 0 chr10 11793374 11793426 -128523339 - L2 LINE L2 -33 3280 3229 261 0 0 0 chr10 11794168 11794197 -128522568 + (T)n Simple_repeat Simple_repeat 1 29 0 472 257 28 110 chr10 11794499 11794717 -128522048 + MIR SINE MIR 46 245 -17 221 0 0 33 chr10 11796808 11796838 -128519927 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 216 235 0 0 chr10 11797775 11797843 -128518922 + CT-rich Low_complexity Low_complexity 1 68 0 298 336 22 0 chr10 11798663 11798797 -128517968 - MIR3 SINE MIR -52 156 20 365 179 64 0 chr10 11799067 11799145 -128517620 - Charlie5 DNA MER1_type -2503 109 27 21 0 0 0 chr10 11799471 11799492 -128517273 + AT_rich Low_complexity Low_complexity 1 21 0 192 97 0 0 chr10 11800414 11800445 -128516320 + (A)n Simple_repeat Simple_repeat 1 31 0 2029 100 4 0 chr10 11801801 11802070 -128514695 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 11804088 11804110 -128512655 + AT_rich Low_complexity Low_complexity 1 22 0 508 184 0 10 chr10 11805373 11805471 -128511294 + FLAM_A SINE Alu 35 131 -11 351 0 0 0 chr10 11806023 11806062 -128510703 + (T)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr10 11809062 11809084 -128507681 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 11809448 11809479 -128507286 + AT_rich Low_complexity Low_complexity 1 31 0 188 61 61 0 chr10 11810164 11810197 -128506568 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 27 0 0 0 chr10 11811469 11811496 -128505269 + AT_rich Low_complexity Low_complexity 1 27 0 838 311 135 39 chr10 11814940 11815478 -128501287 - L3 LINE CR1 -214 1363 761 189 0 0 0 chr10 11815478 11815499 -128501266 + (TG)n Simple_repeat Simple_repeat 2 22 0 838 311 135 39 chr10 11815499 11815552 -128501213 - L3 LINE CR1 -816 761 715 330 267 81 34 chr10 11815576 11815779 -128500986 - MIR SINE MIR -26 236 18 299 247 43 54 chr10 11815806 11815899 -128500866 + L2 LINE L2 3220 3311 -2 686 328 109 40 chr10 11815972 11816368 -128500397 - L3 LINE CR1 -1082 495 73 21 0 0 0 chr10 11816665 11816686 -128500079 + AT_rich Low_complexity Low_complexity 1 21 0 1987 155 3 18 chr10 11816962 11817304 -128499461 + MER1B DNA MER1_type 1 337 0 1908 133 0 37 chr10 11817473 11817796 -128498969 - AluSx SINE Alu -1 311 1 204 67 0 0 chr10 11873011 11873041 -128443724 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 31 0 0 0 chr10 11876750 11876781 -128439984 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 11877179 11877200 -128439565 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 576 266 130 11 chr10 11881335 11881519 -128435246 + MIR SINE MIR 4 209 -53 449 248 50 8 chr10 11882448 11882569 -128434196 + L2 LINE L2 3136 3261 -11 205 302 94 19 chr10 11883249 11883355 -128433410 - L2 LINE L2 0 3313 3200 528 204 148 28 chr10 11884643 11884785 -128431980 + MIR SINE MIR 13 171 -91 186 231 0 92 chr10 11886286 11886351 -128430414 + L3 LINE CR1 809 867 -710 383 296 77 18 chr10 11887088 11887257 -128429508 - MIR SINE MIR -16 246 68 328 206 244 23 chr10 11888397 11888528 -128428237 + MER53 DNA DNA 23 182 -7 * 452 173 109 18 chr10 11888434 11888544 -128428221 - MER53 DNA DNA -69 120 1 1131 201 139 37 chr10 11888861 11889250 -128427515 - MER66A LTR ERV1 -50 445 97 1916 158 11 29 chr10 11889288 11889571 -128427194 - MER66A-int LTR ERV1 0 6676 6399 2358 95 7 0 chr10 11889571 11889867 -128426898 + AluSp SINE Alu 4 301 -12 1916 158 11 29 chr10 11889867 11889932 -128426833 - MER66A-int LTR ERV1 -277 6399 6334 957 180 71 38 chr10 11890026 11890237 -128426528 - MER66A-int LTR ERV1 -1848 4828 4611 462 194 78 10 chr10 11890325 11890428 -128426337 - MER4D LTR ERV1 -711 161 52 7932 188 95 67 chr10 11890428 11890795 -128425970 - MER66A-int LTR ERV1 -2239 4437 4082 2486 113 19 19 chr10 11890795 11891159 -128425606 - THE1B LTR MaLR 0 364 1 7932 188 95 67 chr10 11891159 11892839 -128423926 - MER66A-int LTR ERV1 -2594 4082 2333 7519 201 68 43 chr10 11892824 11893373 -128423392 - MER66A-int LTR ERV1 -4507 2169 1635 * 1716 171 20 7 chr10 11893373 11893666 -128423099 - AluJo SINE Alu -15 297 1 7519 201 68 43 chr10 11893666 11894533 -128422232 - MER66A-int LTR ERV1 -5041 1635 690 1663 172 59 0 chr10 11894533 11894806 -128421959 + AluSg SINE Alu 1 289 -21 7519 201 68 43 chr10 11894806 11895313 -128421452 - MER66A-int LTR ERV1 -5986 690 197 1437 182 93 77 chr10 11895489 11895956 -128420809 - MER66A LTR ERV1 0 478 97 240 250 0 0 chr10 11896181 11896233 -128420532 + MIR SINE MIR 72 123 -139 579 152 12 90 chr10 11896574 11896746 -128420019 + MER66A LTR ERV1 97 303 -251 378 42 0 0 chr10 11897152 11897200 -128419565 + (TG)n Simple_repeat Simple_repeat 2 49 0 2139 146 0 3 chr10 11897590 11897899 -128418866 - AluSx SINE Alu -4 308 1 199 323 62 21 chr10 11898041 11898137 -128418628 - L2 LINE L2 -15 3298 3199 26 0 0 0 chr10 11899086 11899112 -128417653 + AT_rich Low_complexity Low_complexity 1 26 0 773 188 0 7 chr10 11899373 11899517 -128417248 - MLT1D LTR MaLR 0 505 363 2270 116 0 0 chr10 11899722 11900023 -128416742 + AluSx SINE Alu 1 301 -11 247 163 0 20 chr10 11900065 11900114 -128416651 + L1MD1 LINE L1 5692 5739 -382 1667 165 62 24 chr10 11900128 11900419 -128416346 + AluJo SINE Alu 1 302 -10 514 287 126 18 chr10 11900748 11900971 -128415794 + MIR SINE MIR 16 262 0 248 298 134 72 chr10 11900975 11901237 -128415528 - L2 LINE L2 -349 2965 2688 1750 193 63 30 chr10 11901237 11901663 -128415102 + L1MD1 LINE L1 5803 6242 0 2138 179 6 6 chr10 11902055 11902418 -128414347 + MLT1A1 LTR MaLR 3 365 0 246 266 84 59 chr10 11903572 11903775 -128412990 + MLT1J LTR MaLR 201 408 -103 216 111 0 0 chr10 11903800 11903836 -128412929 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 278 289 112 48 chr10 11903915 11903951 -128412814 + L1ME4a LINE L1 5700 5732 -389 2099 119 0 17 chr10 11903951 11904246 -128412519 + AluSx SINE Alu 1 290 -22 278 289 112 48 chr10 11904246 11904396 -128412369 + L1ME4a LINE L1 5732 5898 -223 1860 159 43 0 chr10 11904400 11904726 -128412039 - MER47A DNA MER2_type 0 366 27 236 188 101 14 chr10 11904807 11904876 -128411889 + L1ME4a LINE L1 5951 6025 -96 2273 115 0 3 chr10 11905814 11906118 -128410647 - AluSq SINE Alu -10 303 1 3891 150 20 83 chr10 11907000 11907083 -128409682 + LTR39 LTR ERV1 1 88 -695 2158 122 3 0 chr10 11907083 11907377 -128409388 + AluSx SINE Alu 1 295 -17 3891 150 20 83 chr10 11907377 11907770 -128408995 + LTR39 LTR ERV1 88 408 -375 2244 109 0 6 chr10 11907770 11908081 -128408684 - AluSx SINE Alu -3 309 1 3891 150 20 83 chr10 11908081 11908408 -128408357 + LTR39 LTR ERV1 408 754 -29 929 209 29 9 chr10 11910839 11911049 -128405716 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 11911122 11911244 -128405521 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 11911403 11911818 -128404947 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 11912209 11912382 -128404383 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 11912533 11912589 -128404176 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 11912717 11913018 -128403747 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 11913080 11913338 -128403427 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 11913986 11914299 -128402466 - AluSq SINE Alu 0 313 1 1662 171 3 39 chr10 11914301 11914610 -128402155 - AluJo SINE Alu -9 303 6 2265 131 0 0 chr10 11914780 11915092 -128401673 - AluSx SINE Alu 0 312 1 724 274 248 20 chr10 11915147 11915331 -128401434 + L2 LINE L2 2044 2185 -1129 1745 189 7 0 chr10 11915331 11915627 -128401138 - AluJo SINE Alu -14 298 1 724 274 248 20 chr10 11915627 11915755 -128401010 + L2 LINE L2 2185 2283 -1031 2025 148 3 0 chr10 11915755 11916052 -128400713 + AluSx SINE Alu 1 298 -14 724 274 248 20 chr10 11916052 11916238 -128400527 + L2 LINE L2 2283 2657 -657 227 204 92 168 chr10 11916287 11916483 -128400282 + L2 LINE L2 2889 3069 -244 353 250 59 52 chr10 11916515 11916651 -128400114 + MER63 DNA MER1_type 1 763 -73 289 259 16 127 chr10 11916691 11916880 -128399885 + L2 LINE L2 3106 3273 -40 405 158 0 0 chr10 11916931 11916988 -128399777 - FLAM_A SINE Alu -21 122 66 319 140 0 18 chr10 11917150 11917207 -128399558 - FLAM_A SINE Alu -71 61 6 716 233 61 17 chr10 11917208 11917388 -128399377 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 11917397 11917445 -128399320 + L2 LINE L2 3263 3310 -3 227 162 0 0 chr10 11917498 11917535 -128399230 - MLT1A1 LTR MaLR 0 365 329 1090 151 6 45 chr10 11917535 11917714 -128399051 + FAM SINE Alu 1 172 -13 1358 208 33 45 chr10 11917714 11918051 -128398714 - MLT1A1 LTR MaLR -32 333 1 380 292 116 13 chr10 11918267 11918438 -128398327 - MIR SINE MIR -43 165 2 196 291 50 92 chr10 11918735 11918876 -128397889 - MIR3 SINE MIR -71 137 3 2341 117 0 9 chr10 11918903 11919219 -128397546 - AluSq SINE Alu 0 313 1 416 213 11 21 chr10 11919430 11919524 -128397241 - MER5B DNA MER1_type -85 93 1 229 211 0 58 chr10 11919524 11919559 -128397206 - MIR3 SINE MIR -51 157 126 474 268 140 0 chr10 11919869 11920033 -128396732 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 11920135 11920244 -128396521 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 11920341 11920653 -128396112 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 11921172 11921300 -128395465 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 11921467 11921535 -128395230 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 11921804 11921915 -128394850 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 11922771 11922849 -128393916 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 11922871 11923108 -128393657 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 11923108 11923373 -128393392 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 11923373 11923912 -128392853 + MER21B LTR ERV1 255 794 -69 255 315 130 22 chr10 11924079 11924263 -128392502 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 11924322 11924462 -128392303 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 11924462 11924762 -128392003 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 11926114 11926333 -128390432 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 11926361 11926700 -128390065 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 11927448 11927809 -128388956 - THE1B LTR MaLR 0 364 1 2221 115 7 0 chr10 11929240 11929536 -128387229 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 11930930 11931021 -128385744 + GA-rich Low_complexity Low_complexity 1 97 0 2273 118 0 3 chr10 11931057 11931371 -128385394 + AluSq SINE Alu 1 313 0 4057 143 9 6 chr10 11932383 11933034 -128383731 + MER39B LTR ERV1 1 653 0 2128 77 46 82 chr10 11933327 11933555 -128383210 + L1MA2 LINE L1 5927 6137 -167 2148 131 3 0 chr10 11933555 11933846 -128382919 + AluSx SINE Alu 1 292 -20 2128 77 46 82 chr10 11933846 11934009 -128382756 + L1MA2 LINE L1 6137 6304 0 2233 128 32 11 chr10 11934101 11934477 -128382288 - MLT1B LTR MaLR -4 386 3 1855 135 44 101 chr10 11934520 11934727 -128382038 - THE1B LTR MaLR 0 364 188 2344 119 0 0 chr10 11934727 11935039 -128381726 + AluSq SINE Alu 1 312 -1 1855 135 44 101 chr10 11935039 11935217 -128381548 - THE1B LTR MaLR -176 188 1 5155 102 10 0 chr10 11936226 11936938 -128379827 + LTR30 LTR ERV1 2 720 -2 1991 126 7 10 chr10 11936938 11937262 -128379503 + AluSx SINE Alu 10 332 0 214 167 0 0 chr10 11937465 11937501 -128379264 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 256 241 218 30 chr10 11938956 11939089 -128377676 + MIR3 SINE MIR 10 167 -41 316 224 17 60 chr10 11940726 11940842 -128375923 - L2 LINE L2 -177 3095 2985 532 227 81 86 chr10 11941135 11941366 -128375399 - L1MC5 LINE L1 -60 7901 7670 2256 118 0 0 chr10 11941366 11941662 -128375103 + AluSx SINE Alu 2 297 -15 532 227 81 86 chr10 11941662 11942366 -128374399 - L1MC5 LINE L1 -291 7670 6780 416 363 18 6 chr10 11942503 11942671 -128374094 + MIR SINE MIR 24 193 -69 379 385 0 6 chr10 11943336 11943573 -128373192 + (TG)n Simple_repeat Simple_repeat 1 235 0 2079 154 59 77 chr10 11944788 11945007 -128371758 + MER31A LTR ERV1 1 222 -263 3421 121 31 13 chr10 11945007 11945560 -128371205 + L1MA2 LINE L1 5741 6303 -1 2079 154 59 77 chr10 11945560 11945834 -128370931 + MER31A LTR ERV1 222 485 0 7926 21 0 0 chr10 11946009 11947127 -128369638 + L1PA3 LINE L1 5038 6155 0 1065 163 102 0 chr10 11948027 11948223 -128368542 - AluJo SINE Alu -10 302 87 214 184 20 0 chr10 11948328 11948377 -128368388 + GA-rich Low_complexity Low_complexity 1 50 0 745 149 51 93 chr10 11948664 11948739 -128368026 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 11948739 11949004 -128367761 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 11949004 11949142 -128367623 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 11949176 11949341 -128367424 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 11949636 11949683 -128367082 - L1MB3 LINE L1 -28 6155 6109 2388 133 34 0 chr10 11949683 11950035 -128366730 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 11950035 11950380 -128366385 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 11950386 11950457 -128366308 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 11950981 11951278 -128365487 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 11951335 11951514 -128365251 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 11952370 11952413 -128364352 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 11952494 11952518 -128364247 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 11953185 11953804 -128362961 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 11953804 11954119 -128362646 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 11954119 11954416 -128362349 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 11954418 11954486 -128362279 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 11954496 11954677 -128362088 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 11955088 11955205 -128361560 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 11955404 11955554 -128361211 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 11955564 11955714 -128361051 - MIR SINE MIR -63 199 43 534 251 121 103 chr10 11956232 11956439 -128360326 + MLT1J LTR MaLR 6 208 -303 2475 86 3 0 chr10 11956439 11956740 -128360025 - AluSg SINE Alu -8 302 1 534 251 121 103 chr10 11956740 11957027 -128359738 + MLT1J LTR MaLR 208 509 -2 430 278 28 45 chr10 11957071 11957247 -128359518 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 11957679 11957850 -128358915 + MIR SINE MIR 44 240 -22 4162 156 17 57 chr10 11957855 11958171 -128358594 + L1MCa LINE L1 202 529 -5897 1662 151 80 37 chr10 11958171 11958218 -128358547 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 11958218 11958532 -128358233 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 11958532 11958835 -128357930 + MER47A DNA MER2_type 45 366 0 4162 156 17 57 chr10 11958835 11959296 -128357469 + L1MCa LINE L1 529 943 -5483 1933 117 32 58 chr10 11959296 11959604 -128357161 + AluSq SINE Alu 1 300 -13 4162 156 17 57 chr10 11959604 11959704 -128357061 + L1MCa LINE L1 943 1045 -5381 2266 166 29 45 chr10 11959698 11959913 -128356852 + L1MCa LINE L1 1713 1930 -4496 * 2217 117 0 13 chr10 11959913 11960212 -128356553 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11960212 11960228 -128356537 + L1MCa LINE L1 1930 1945 -4481 2224 112 7 3 chr10 11960228 11960522 -128356243 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11960522 11960777 -128355988 + L1MCa LINE L1 1945 2192 -4234 8077 240 33 18 chr10 11960781 11961025 -128355740 + L1MCa LINE L1 2278 2517 -3909 3254 142 19 0 chr10 11961025 11961540 -128355225 - L1PA16 LINE L1 0 6166 5642 8077 240 33 18 chr10 11961540 11963609 -128353156 + L1MCa LINE L1 2517 4639 -1787 1916 104 8 0 chr10 11963609 11963858 -128352907 + AluSg SINE Alu 46 296 -14 8077 240 33 18 chr10 11963858 11964142 -128352623 + L1MCa LINE L1 4639 4917 -1509 1727 173 22 0 chr10 11964151 11964428 -128352337 + AluJo SINE Alu 9 291 -21 189 94 0 0 chr10 11964429 11964461 -128352304 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 679 287 83 63 chr10 11964550 11965328 -128351437 - L1MC5 LINE L1 -924 6884 6112 600 306 93 38 chr10 11965350 11965439 -128351326 - MER115 DNA AcHobo -9 684 601 2105 139 0 3 chr10 11965439 11965734 -128351031 - AluSx SINE Alu -18 294 1 600 306 93 38 chr10 11965734 11966108 -128350657 - MER115 DNA AcHobo -92 601 140 423 0 0 0 chr10 11966287 11966334 -128350431 + (CA)n Simple_repeat Simple_repeat 2 48 0 1085 184 14 0 chr10 11968053 11968260 -128348505 - Tigger1 DNA MER2_type 0 2418 2209 691 175 0 113 chr10 11968281 11968441 -128348324 - Tigger1 DNA MER2_type -2276 142 1 2194 105 9 6 chr10 11968451 11968782 -128347983 - THE1B LTR MaLR -30 427 1 337 265 32 91 chr10 11968914 11969133 -128347632 + MLT1L LTR MaLR 112 391 -194 1972 152 11 55 chr10 11969143 11969356 -128347409 - MLT1A1 LTR MaLR 0 365 175 2462 97 0 0 chr10 11969356 11969665 -128347100 - AluSx SINE Alu -3 309 1 1972 152 11 55 chr10 11969665 11969833 -128346932 - MLT1A1 LTR MaLR -190 175 1 2384 113 0 3 chr10 11970740 11971049 -128345716 - AluSx SINE Alu -4 308 1 419 177 0 0 chr10 11971560 11971639 -128345126 - LTR41 LTR ERVL -638 135 57 1383 210 66 17 chr10 11972503 11972851 -128343914 + MLT1A1 LTR MaLR 1 365 0 184 265 0 20 chr10 11974526 11974575 -128342190 - MIR SINE MIR -113 149 102 1782 186 0 17 chr10 11974586 11974881 -128341884 + AluJo SINE Alu 1 290 -22 962 185 6 12 chr10 11974893 11975055 -128341710 + AluJb SINE Alu 136 296 -16 2260 105 7 20 chr10 11975284 11975589 -128341176 - AluSg SINE Alu -9 301 1 1690 146 64 11 chr10 11975751 11976031 -128340734 + AluJo SINE Alu 1 295 -17 488 143 154 0 chr10 11976556 11976647 -128340118 + MLT1F LTR MaLR 438 542 0 618 221 70 47 chr10 11976654 11976867 -128339898 - LTR37B LTR ERV1 -53 415 198 461 276 76 0 chr10 11976982 11977127 -128339638 - MER20 DNA MER1_type -63 156 1 335 194 15 0 chr10 11977127 11977189 -128339576 - LTR37B LTR ERV1 -348 120 58 1418 162 164 55 chr10 11977190 11977573 -128339192 - MER61B LTR ERV1 0 425 1 292 286 0 0 chr10 11977589 11977666 -128339099 + MER34 LTR ERV1 3 79 -463 1728 202 139 92 chr10 11977927 11978651 -128338114 - LTR19C LTR ERV1 -15 764 7 359 293 49 24 chr10 11978716 11978839 -128337926 + MER34 LTR ERV1 388 513 -29 2198 120 3 0 chr10 11978882 11979183 -128337582 - AluSx SINE Alu -10 302 1 313 281 16 49 chr10 11980767 11980952 -128335813 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 321 319 25 12 chr10 11980929 11981092 -128335673 + (TGGA)n Simple_repeat Simple_repeat 2 166 0 2764 103 11 3 chr10 11981092 11981702 -128335063 - PABL_A LTR ERV1 0 660 1 275 275 28 21 chr10 11981734 11981876 -128334889 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 3351 160 30 22 chr10 11982695 11983325 -128333440 + MER41B LTR ERV1 1 635 0 1582 169 17 7 chr10 11984079 11984381 -128332384 - MER47A DNA MER2_type -3 363 59 3078 176 121 37 chr10 11984381 11985157 -128331608 + MER21B LTR ERV1 20 860 -3 703 296 66 8 chr10 11985199 11985456 -128331309 - MER5C DNA MER1_type -51 273 2 281 212 144 68 chr10 11985510 11985642 -128331123 - MER103 DNA DNA -8 158 17 246 257 40 3 chr10 11986945 11987038 -128329727 + MLT1H1 LTR MaLR 180 278 -289 274 247 28 62 chr10 11987086 11987132 -128329633 + C-rich Low_complexity Low_complexity 2 48 -125 218 81 27 0 chr10 11987132 11987169 -128329596 + (CCCCAG)n Simple_repeat Simple_repeat 2 39 0 274 247 28 62 chr10 11987169 11987300 -128329465 + C-rich Low_complexity Low_complexity 48 173 0 370 294 143 0 chr10 11987800 11987919 -128328846 + MIR SINE MIR 121 256 -6 2012 133 6 19 chr10 11987920 11988235 -128328530 - AluJo SINE Alu 0 312 2 1086 290 104 14 chr10 11988267 11989147 -128327618 + L2 LINE L2 2328 3297 -16 506 66 0 13 chr10 11989147 11989223 -128327542 + (GGGA)n Simple_repeat Simple_repeat 3 77 0 409 291 24 16 chr10 11990969 11991096 -128325669 + MER5A DNA MER1_type 9 136 -53 253 279 59 59 chr10 11991712 11991848 -128324917 - L2 LINE L2 -479 2835 2700 2350 96 16 0 chr10 11991939 11992242 -128324523 - AluSx SINE Alu -4 308 1 1381 89 68 11 chr10 11993447 11993637 -128323128 - AluSc SINE Alu -9 300 100 421 255 71 33 chr10 11994693 11994877 -128321888 - L1MC4a LINE L1 -1910 5898 5708 850 110 0 0 chr10 11994884 11994993 -128321772 + AluSg/x SINE Alu 186 294 -16 1836 159 0 14 chr10 11995644 11995940 -128320825 + AluJo SINE Alu 1 292 -20 382 216 31 0 chr10 11995944 11996041 -128320724 - MER5B DNA MER1_type -78 100 1 1769 159 0 4 chr10 11996069 11996339 -128320426 - AluSx SINE Alu -43 269 1 215 235 147 0 chr10 11997135 11997203 -128319562 - MIR SINE MIR -65 197 120 * 353 181 36 36 chr10 11997202 11997285 -128319480 + L2 LINE L2 3190 3272 -41 332 279 66 8 chr10 11997401 11997523 -128319242 - MIR SINE MIR -57 151 23 191 340 63 48 chr10 11997751 11997957 -128318808 + L2 LINE L2 2278 2486 -828 3226 201 123 5 chr10 11997989 11999526 -128317239 + L1MB8 LINE L1 4369 6173 -5 867 269 67 0 chr10 11999540 11999763 -128317002 + MIR SINE MIR 24 261 -1 208 227 109 47 chr10 12000116 12000244 -128316521 + L2 LINE L2 2932 3067 -205 398 296 30 0 chr10 12000783 12000915 -128315850 - MER5B DNA MER1_type -16 162 27 2207 109 0 53 chr10 12001107 12001429 -128315336 + AluSx SINE Alu 1 305 -7 2310 88 0 0 chr10 12001962 12002246 -128314519 - AluSc SINE Alu -17 292 9 293 82 20 0 chr10 12003104 12003153 -128313612 + (TA)n Simple_repeat Simple_repeat 1 50 0 362 330 34 38 chr10 12006584 12006793 -128309972 - L2 LINE L2 -419 2895 2688 404 342 121 9 chr10 12006840 12007071 -128309694 - MIR SINE MIR -2 260 4 301 314 81 8 chr10 12007075 12007199 -128309566 - L2 LINE L2 -745 2569 2437 249 33 0 0 chr10 12008091 12008121 -128308644 + (CTG)n Simple_repeat Simple_repeat 1 30 0 298 265 250 8 chr10 12008716 12008848 -128307917 - L3 LINE CR1 -466 1111 948 401 292 174 14 chr10 12008902 12009121 -128307644 + MIR SINE MIR 9 262 0 1660 207 36 3 chr10 12009129 12009463 -128307302 - MER7A DNA MER2_type 0 346 4 382 345 121 10 chr10 12009493 12009699 -128307066 - L3 LINE CR1 -752 825 597 387 275 160 40 chr10 12009703 12009903 -128306862 + L1ME LINE L1 5272 5495 -2313 307 253 42 0 chr10 12009908 12010003 -128306762 + L1ME LINE L1 5617 5715 -406 491 351 98 21 chr10 12010438 12010774 -128305991 - L3 LINE CR1 -1080 497 136 2415 75 7 3 chr10 12013402 12013708 -128303057 + AluY SINE Alu 1 307 -4 5610 51 21 4 chr10 12013762 12014474 -128302291 + L1PA5 LINE L1 5430 6153 -1 300 212 150 22 chr10 12016087 12016239 -128300526 + MIR SINE MIR 6 154 -69 327 236 21 135 chr10 12017653 12017819 -128298946 + L1MC4 LINE L1 7016 7129 -913 2176 83 57 17 chr10 12017819 12018120 -128298645 + AluSp SINE Alu 1 313 0 327 236 21 135 chr10 12018120 12018286 -128298479 + L1MC4 LINE L1 7129 7312 -730 28 29 0 0 chr10 12018286 12018321 -128298444 + AT_rich Low_complexity Low_complexity 1 35 0 230 240 8 48 chr10 12018995 12019120 -128297645 + L1ME4a LINE L1 5963 6082 -39 2240 124 0 0 chr10 12019359 12019665 -128297100 - AluSx SINE Alu -6 306 1 587 319 151 34 chr10 12019683 12020427 -128296338 + L1MC/D LINE L1 3159 3989 -2157 1736 154 0 4 chr10 12021135 12021401 -128295364 + AluJb SINE Alu 19 283 -29 313 306 138 30 chr10 12021786 12022018 -128294747 + L1MC/D LINE L1 5305 5561 -2224 2356 100 0 0 chr10 12022060 12022369 -128294396 - AluY SINE Alu -2 309 1 295 276 198 9 chr10 12022669 12022785 -128293980 + MIR SINE MIR 123 260 -2 24 67 0 0 chr10 12022925 12022970 -128293795 + AT_rich Low_complexity Low_complexity 1 45 0 306 341 19 23 chr10 12023732 12023892 -128292873 + MIR SINE MIR 1 146 -62 274 250 20 20 chr10 12025143 12025243 -128291522 - L1ME LINE L1 -328 5793 5694 1301 150 73 7 chr10 12025351 12025624 -128291141 - L1MA8 LINE L1 -2 6289 5999 810 165 11 11 chr10 12025979 12026155 -128290610 + GA-rich Low_complexity Low_complexity 1 176 0 222 255 0 0 chr10 12026157 12026204 -128290561 + G-rich Low_complexity Low_complexity 1 47 0 206 287 11 23 chr10 12026323 12026410 -128290355 + GA-rich Low_complexity Low_complexity 4 89 0 1562 157 32 21 chr10 12031624 12031905 -128284860 + AluJo SINE Alu 1 284 -28 213 108 0 0 chr10 12034036 12034073 -128282692 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 21 100 0 0 chr10 12034381 12034451 -128282314 + AT_rich Low_complexity Low_complexity 1 70 0 4582 209 53 6 chr10 12034668 12035764 -128281001 + ERVL-C1 LTR ERVL 4611 5757 -7 1118 231 33 48 chr10 12035768 12036166 -128280599 + MLT2C1 LTR ERVL 6 397 0 4098 243 100 66 chr10 12036927 12037929 -128278836 - HAL1 LINE L1 -273 2234 1267 8211 53 7 1 chr10 12037929 12038930 -128277835 - LTR13 LTR ERVK 0 1007 1 4098 243 100 66 chr10 12038930 12040084 -128276681 - HAL1 LINE L1 -1240 1267 5 180 0 0 0 chr10 12040591 12040611 -128276154 + (T)n Simple_repeat Simple_repeat 1 20 0 2369 80 0 10 chr10 12040625 12040936 -128275829 + AluY SINE Alu 1 308 -3 441 75 0 0 chr10 12041373 12041440 -128275325 + AluSp/q SINE Alu 244 310 -3 26 30 0 0 chr10 12041851 12041884 -128274881 + AT_rich Low_complexity Low_complexity 1 33 0 2364 88 3 3 chr10 12041957 12042263 -128274502 + AluSg SINE Alu 1 306 -4 528 257 50 50 chr10 12042437 12042616 -128274149 + MIR SINE MIR 37 215 -47 1099 228 103 19 chr10 12043444 12043870 -128272895 + MLT1C LTR MaLR 6 467 0 345 219 0 27 chr10 12043907 12043980 -128272785 - L2 LINE L2 -1 3271 3201 2413 89 8 28 chr10 12044000 12044358 -128272407 + L1PA11 LINE L1 5824 6174 0 22 0 0 0 chr10 12044590 12044612 -128272153 + AT_rich Low_complexity Low_complexity 1 22 0 226 236 0 18 chr10 12045773 12045828 -128270937 + CT-rich Low_complexity Low_complexity 6 59 0 2517 60 0 3 chr10 12045978 12046280 -128270485 + AluY SINE Alu 1 301 -10 185 282 0 0 chr10 12047606 12047645 -128269120 - MIR SINE MIR -15 247 209 316 321 0 22 chr10 12047730 12047867 -128268898 - MIR SINE MIR -47 215 82 184 345 26 35 chr10 12048387 12048500 -128268265 - MIR SINE MIR -72 190 79 290 315 128 34 chr10 12048633 12048782 -128267983 - L2 LINE L2 0 3272 3110 663 267 58 33 chr10 12049284 12049524 -128267241 - MIR SINE MIR -10 252 7 241 336 45 9 chr10 12050098 12050208 -128266557 + MIR3 SINE MIR 65 178 -30 1717 151 23 33 chr10 12050359 12050663 -128266102 + AluJo SINE Alu 1 301 -11 276 226 87 52 chr10 12051615 12051730 -128265035 - MER103 DNA DNA -46 120 2 810 204 159 9 chr10 12051743 12051969 -128264796 - MIR SINE MIR 0 262 3 616 237 50 0 chr10 12052223 12052362 -128264403 - MIR SINE MIR -5 257 112 289 207 126 0 chr10 12052383 12052470 -128264295 + Charlie1a DNA MER1_type 59 156 -1299 1790 228 83 29 chr10 12052472 12053064 -128263701 + Charlie1a DNA MER1_type 125 748 -707 27 49 0 0 chr10 12053949 12053990 -128262775 + AT_rich Low_complexity Low_complexity 1 41 0 712 264 71 9 chr10 12054469 12054681 -128262084 + MIR SINE MIR 6 230 -32 649 152 45 23 chr10 12054801 12054933 -128261832 - FRAM SINE Alu 0 40 1 225 151 68 14 chr10 12054945 12055018 -128261747 - AluS SINE Alu -222 80 4 319 304 32 8 chr10 12055377 12055502 -128261263 + MER58B DNA MER1_type 212 339 -2 503 183 89 61 chr10 12055582 12055762 -128261003 + MER20 DNA MER1_type 1 185 -34 248 321 80 7 chr10 12055865 12056002 -128260763 - MIR3 SINE MIR -58 150 4 190 277 169 24 chr10 12057988 12058071 -128258694 - L3b LINE CR1 -14 1569 1475 * 358 271 0 0 chr10 12058049 12058134 -128258631 - MIR SINE MIR -113 149 65 23 33 0 0 chr10 12058961 12058991 -128257774 + AT_rich Low_complexity Low_complexity 1 30 0 853 206 37 5 chr10 12059595 12059784 -128256981 + MER3 DNA MER1_type 1 195 -14 948 64 0 8 chr10 12060152 12060277 -128256488 - AluY SINE Alu -13 298 175 324 259 52 9 chr10 12061398 12061514 -128255251 + L1M4 LINE L1 5228 5348 -798 2029 118 12 91 chr10 12062217 12062624 -128254141 - THE1C LTR MaLR 0 375 1 204 97 0 0 chr10 12063545 12063576 -128253189 + (CTG)n Simple_repeat Simple_repeat 3 33 0 321 304 39 0 chr10 12065112 12065214 -128251551 - MIR SINE MIR -109 153 48 220 302 127 78 chr10 12065477 12065570 -128251195 - L2 LINE L2 -477 2837 2750 1911 112 30 3 chr10 12065570 12065866 -128250899 - AluSc SINE Alu -5 304 1 220 302 127 78 chr10 12065866 12065977 -128250788 - L2 LINE L2 -564 2750 2623 586 254 102 25 chr10 12066028 12066264 -128250501 - MIR SINE MIR -4 258 5 736 115 19 0 chr10 12066432 12066536 -128250229 - AluSg/x SINE Alu -15 297 192 227 111 0 111 chr10 12067087 12067150 -128249615 + L1MC/D LINE L1 5737 5792 -2016 21 0 0 0 chr10 12067279 12067300 -128249465 + AT_rich Low_complexity Low_complexity 1 21 0 504 234 14 0 chr10 12067998 12068139 -128248626 + L1MC3 LINE L1 7643 7785 0 240 289 165 0 chr10 12069526 12069623 -128247142 + L2 LINE L2 3199 3311 -2 25 75 0 0 chr10 12069838 12069891 -128246874 + AT_rich Low_complexity Low_complexity 1 53 0 10837 39 3 0 chr10 12070517 12071826 -128244939 + L1P LINE L1 1598 2910 -3236 1471 170 74 51 chr10 12072204 12072540 -128244225 + MER2 DNA MER2_type 1 344 0 736 145 94 7 chr10 12073171 12073309 -128243456 - L1MC3 LINE L1 -1003 6782 6633 881 141 0 0 chr10 12073408 12073536 -128243229 + AluSg/x SINE Alu 174 301 -11 2433 104 0 0 chr10 12074613 12074921 -128241844 + AluSx SINE Alu 1 308 -4 242 284 134 8 chr10 12074952 12075086 -128241679 - L1M4 LINE L1 -1305 4841 4691 754 200 0 0 chr10 12075108 12075243 -128241522 - FLAM_A SINE Alu -1 141 7 373 209 85 102 chr10 12078751 12078928 -128237837 + MER5B DNA MER1_type 2 175 -3 4330 78 7 0 chr10 12079873 12080422 -128236343 - MER41A LTR ERV1 -1 553 1 468 99 0 0 chr10 12081307 12081378 -128235387 + (CA)n Simple_repeat Simple_repeat 2 72 0 421 163 75 0 chr10 12081381 12081461 -128235304 + MER53 DNA DNA 101 186 -3 2222 234 102 42 chr10 12081644 12082367 -128234398 + MER21B LTR ERV1 12 778 -85 291 330 10 0 chr10 12085471 12085568 -128231197 - L2 LINE L2 -498 2816 2719 6841 39 2 164 chr10 12086235 12087421 -128229344 + L1P LINE L1 3658 4652 -1494 22 70 0 0 chr10 12088009 12088052 -128228713 + AT_rich Low_complexity Low_complexity 1 43 0 707 166 47 72 chr10 12088702 12088895 -128227870 + MER53 DNA DNA 1 188 -1 22 35 0 0 chr10 12090805 12090834 -128225931 + AT_rich Low_complexity Low_complexity 1 29 0 470 279 99 64 chr10 12092191 12092503 -128224262 - L2 LINE L2 -62 3251 2929 499 106 0 0 chr10 12092503 12092569 -128224196 + Alu SINE Alu 2 67 -243 240 111 0 0 chr10 12093282 12093318 -128223447 + (CAT)n Simple_repeat Simple_repeat 1 36 0 363 254 49 16 chr10 12093756 12093878 -128222887 - MIR3 SINE MIR -30 178 53 193 310 155 7 chr10 12094023 12094178 -128222587 - MER5B DNA MER1_type 0 178 1 206 296 46 37 chr10 12095894 12096002 -128220763 + MIR SINE MIR 30 138 -124 556 320 101 24 chr10 12097370 12097785 -128218980 + L1ME LINE L1 5264 5710 -411 259 310 14 125 chr10 12097811 12098108 -128218657 - L2 LINE L2 -22 3250 2987 251 191 16 0 chr10 12098474 12098537 -128218228 + G-rich Low_complexity Low_complexity 5 68 0 318 297 187 48 chr10 12099352 12099770 -128216995 + L2 LINE L2 1889 2364 -950 2221 189 62 25 chr10 12099798 12100284 -128216481 + MLT1D LTR MaLR 1 504 -1 1007 211 59 157 chr10 12101107 12101899 -128214866 - L1MC5 LINE L1 -199 7762 7048 184 305 17 0 chr10 12103052 12103111 -128213654 + MIR SINE MIR 93 152 -110 1301 156 71 212 chr10 12103140 12103706 -128213059 + MLT1E2 LTR MaLR 16 622 -4 1094 150 18 53 chr10 12107144 12107371 -128209394 - MER20 DNA MER1_type 0 219 1 464 260 164 6 chr10 12108168 12108345 -128208420 + MIR SINE MIR 46 250 -12 331 264 75 0 chr10 12108387 12108493 -128208272 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 12108675 12109023 -128207742 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 286 261 188 0 chr10 12109148 12109286 -128207479 + MER5A DNA MER1_type 26 189 0 1847 129 4 7 chr10 12111733 12112004 -128204761 + AluSx SINE Alu 40 309 -3 275 219 41 27 chr10 12112065 12112138 -128204627 - Charlie8 DNA MER1_type 0 2417 2344 364 264 68 61 chr10 12112206 12112369 -128204396 - Charlie8 DNA MER1_type -2187 230 67 861 185 28 6 chr10 12112460 12112638 -128204127 + MER5A DNA MER1_type 1 182 -7 1239 189 52 8 chr10 12112654 12112903 -128203862 + MER58B DNA MER1_type 79 338 -3 322 130 0 0 chr10 12114415 12114461 -128202304 - MER53 DNA DNA -5 184 139 446 220 64 0 chr10 12114527 12114636 -128202129 - MER53 DNA DNA -73 116 1 2370 107 0 19 chr10 12115081 12115399 -128201366 + AluSx SINE Alu 1 312 0 299 311 20 33 chr10 12118935 12119086 -128197679 - L2 LINE L2 -856 2458 2310 337 302 133 31 chr10 12119714 12120105 -128196660 + L2 LINE L2 2829 3259 -54 22 0 0 0 chr10 12121850 12121872 -128194893 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 12121961 12121981 -128194784 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1995 125 7 0 chr10 12121983 12122283 -128194482 - AluSq SINE Alu 0 302 1 531 197 0 141 chr10 12122981 12123125 -128193640 + L1MC5 LINE L1 7753 7863 -98 216 0 0 0 chr10 12123125 12123149 -128193616 + (AATAG)n Simple_repeat Simple_repeat 2 25 0 531 197 0 141 chr10 12123149 12123202 -128193563 + L1MC5 LINE L1 7863 7922 -39 599 272 25 0 chr10 12123443 12123605 -128193160 - MER97b DNA MER1_type? -874 179 14 517 321 148 35 chr10 12123808 12124287 -128192478 - L3 LINE CR1 -323 1254 722 848 256 47 49 chr10 12124307 12124612 -128192153 + L1ME LINE L1 5474 5779 -342 1654 159 0 34 chr10 12124612 12124908 -128191857 + AluJo SINE Alu 20 305 -7 848 256 47 49 chr10 12124908 12124946 -128191819 + L1ME LINE L1 5779 5816 -305 246 333 19 0 chr10 12124970 12125078 -128191687 + L1ME LINE L1 141 250 -5955 307 223 58 58 chr10 12125486 12125589 -128191176 + L1ME LINE L1 786 888 -5508 380 290 129 46 chr10 12125590 12126025 -128190740 + L1ME LINE L1 866 1336 -4869 304 256 72 8 chr10 12126251 12126376 -128190389 + L1M1 LINE L1 2890 3022 -4543 296 276 26 0 chr10 12126685 12126761 -128190004 - L2 LINE L2 -2 3311 3234 327 313 40 0 chr10 12126765 12126895 -128189870 - MIR SINE MIR -63 145 5 2227 101 13 7 chr10 12126987 12127285 -128189480 - AluSx SINE Alu -12 300 1 1669 171 3 39 chr10 12127287 12127596 -128189169 - AluJo SINE Alu -9 303 6 2268 131 0 0 chr10 12127766 12128078 -128188687 - AluSx SINE Alu 0 312 1 609 274 248 20 chr10 12128133 12128317 -128188448 + L2 LINE L2 2044 2185 -1129 1755 189 7 0 chr10 12128317 12128613 -128188152 - AluJo SINE Alu -14 298 1 609 274 248 20 chr10 12128613 12128741 -128188024 + L2 LINE L2 2185 2283 -1031 2034 148 3 0 chr10 12128741 12129038 -128187727 + AluSx SINE Alu 1 298 -14 609 274 248 20 chr10 12129038 12129224 -128187541 + L2 LINE L2 2283 2657 -657 187 207 86 167 chr10 12129273 12129471 -128187294 + L2 LINE L2 2889 3070 -243 376 250 59 52 chr10 12129501 12129637 -128187128 + MER63 DNA MER1_type 1 763 -73 225 240 17 137 chr10 12129677 12129852 -128186913 + L2 LINE L2 3106 3259 -54 226 280 20 0 chr10 12129854 12129904 -128186861 + MER58A DNA MER1_type 1 51 -173 389 168 0 10 chr10 12129911 12129979 -128186786 - FLAM_A SINE Alu -11 122 66 329 140 0 18 chr10 12130136 12130193 -128186572 - FLAM_A SINE Alu -71 61 6 740 250 44 0 chr10 12130194 12130374 -128186391 + MER58A DNA MER1_type 37 224 0 268 167 0 0 chr10 12130383 12130431 -128186334 + L2 LINE L2 3263 3310 -3 228 162 0 0 chr10 12130484 12130521 -128186244 - MLT1A1 LTR MaLR 0 365 329 1094 151 6 45 chr10 12130521 12130700 -128186065 + FAM SINE Alu 1 172 -13 1403 205 33 45 chr10 12130700 12131037 -128185728 - MLT1A1 LTR MaLR -32 333 1 352 327 39 6 chr10 12131253 12131409 -128185356 - MIR SINE MIR -79 183 23 2349 117 0 9 chr10 12131889 12132205 -128184560 - AluSq SINE Alu 0 313 1 390 213 11 21 chr10 12132416 12132510 -128184255 - MER5B DNA MER1_type -85 93 1 213 211 0 58 chr10 12132510 12132545 -128184220 - MIR3 SINE MIR -51 157 126 438 254 50 40 chr10 12132869 12133019 -128183746 + MIR SINE MIR 39 188 -49 289 349 0 0 chr10 12133121 12133230 -128183535 - MIR SINE MIR -69 139 31 2366 106 0 6 chr10 12133327 12133639 -128183126 - AluSg SINE Alu 0 310 1 1001 23 78 0 chr10 12134158 12134286 -128182479 - MER85 DNA T2_type -1 138 1 233 265 15 0 chr10 12134453 12134521 -128182244 + MIR SINE MIR 76 144 -64 221 306 54 18 chr10 12134790 12134901 -128181864 - L2 LINE L2 -509 2805 2691 402 244 0 0 chr10 12135779 12135857 -128180908 + MER21B LTR ERV1 13 90 -773 1934 211 94 95 chr10 12135879 12136116 -128180649 + MER21B LTR ERV1 19 255 -608 1493 196 11 0 chr10 12136116 12136381 -128180384 + AluJb SINE Alu 16 283 -29 1934 211 94 95 chr10 12136381 12136920 -128179845 + MER21B LTR ERV1 255 794 -69 234 359 114 5 chr10 12137087 12137271 -128179494 + L3 LINE CR1 1303 1506 -71 322 300 36 36 chr10 12137330 12137470 -128179295 + MIR3 SINE MIR 42 181 -27 1829 179 7 17 chr10 12137470 12137771 -128178994 - AluJb SINE Alu -14 298 1 1196 192 9 18 chr10 12139123 12139342 -128177423 - AluJo SINE Alu -95 217 1 1555 206 44 3 chr10 12139370 12139709 -128177056 - MLT1A1 LTR MaLR 0 365 13 2076 130 33 25 chr10 12140457 12140818 -128175947 - THE1B LTR MaLR 0 364 1 2227 115 7 0 chr10 12142249 12142545 -128174220 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 12143939 12144030 -128172735 + GA-rich Low_complexity Low_complexity 1 97 0 1425 105 5 5 chr10 12194097 12194306 -128122459 - AluSx SINE Alu -103 209 1 3818 148 32 22 chr10 12194306 12194886 -128121879 + Tigger1 DNA MER2_type 2 592 -1826 1984 125 24 3 chr10 12194886 12195175 -128121590 + AluSx SINE Alu 1 295 -17 3818 148 32 22 chr10 12195175 12195276 -128121489 + Tigger1 DNA MER2_type 592 690 -1728 322 225 84 0 chr10 12195265 12195336 -128121429 + Tigger1 DNA MER2_type 2121 2197 -221 * 965 136 7 0 chr10 12195452 12195606 -128121159 + AluSg/x SINE Alu 142 296 -16 2139 103 3 7 chr10 12195637 12195939 -128120826 + AluSp SINE Alu 1 301 -12 212 255 186 20 chr10 12196377 12196479 -128120286 - MIR SINE MIR -123 139 21 241 218 139 10 chr10 12196538 12196639 -128120126 - HAL1b LINE L1 -442 906 793 1347 126 5 19 chr10 12196872 12197087 -128119678 - AluSx SINE Alu -100 212 1 1726 179 25 23 chr10 12197752 12198105 -128118660 + MLT1A1 LTR MaLR 11 364 -1 2177 112 0 0 chr10 12199653 12199957 -128116808 - AluSx SINE Alu -8 304 1 1493 184 22 7 chr10 12199967 12200244 -128116521 - AluJo SINE Alu -31 281 1 1813 123 68 3 chr10 12200870 12201163 -128115602 + AluJo SINE Alu 1 312 0 225 218 18 18 chr10 12201660 12201715 -128115050 - MLT1K LTR MaLR -1 587 533 1583 128 88 34 chr10 12201844 12202140 -128114625 - AluJb SINE Alu 0 312 1 1423 269 62 40 chr10 12202305 12202825 -128113940 + MER69 DNA AcHobo 1 531 -1995 672 191 0 37 chr10 12202836 12202972 -128113793 + FLAM_C SINE Alu 6 136 -7 571 102 10 10 chr10 12202977 12203075 -128113690 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 585 258 52 16 chr10 12203083 12203277 -128113488 + MER69 DNA AcHobo 601 801 -1725 2398 47 0 10 chr10 12204818 12205119 -128111646 + AluY SINE Alu 1 298 -13 359 234 109 99 chr10 12206658 12206850 -128109915 - L1ME4a LINE L1 -1 6120 5927 419 35 0 0 chr10 12208207 12208264 -128108501 - AluY SINE Alu -10 300 244 815 92 0 0 chr10 12208264 12208373 -128108392 - AluY SINE Alu -138 173 65 2182 81 0 20 chr10 12208473 12208771 -128107994 - AluSc SINE Alu -17 292 1 1056 83 0 0 chr10 12208775 12208908 -128107857 - AluSq/x SINE Alu -179 133 1 876 277 109 27 chr10 12209430 12209834 -128106931 + MLT1J1 LTR MaLR 1 437 -9 258 277 124 67 chr10 12209943 12210225 -128106540 + L2 LINE L2 1728 2025 -1289 2212 100 0 0 chr10 12210550 12210850 -128105915 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 12210944 12210967 -128105798 + (T)n Simple_repeat Simple_repeat 1 23 0 2182 101 0 19 chr10 12211187 12211528 -128105237 - AluSg SINE Alu 0 310 1 286 250 43 17 chr10 12211578 12211694 -128105071 - Charlie2 DNA MER1_type -42 2820 2702 886 171 40 1 chr10 12211695 12211956 -128104809 - AluJo SINE Alu -10 302 2 2079 122 0 0 chr10 12212095 12212398 -128104367 - AluSx SINE Alu -9 303 1 404 260 32 32 chr10 12212402 12212556 -128104209 - L2 LINE L2 -239 3074 2921 410 143 13 0 chr10 12212653 12212730 -128104035 + CT-rich Low_complexity Low_complexity 1 78 0 224 253 147 0 chr10 12212899 12212974 -128103791 - L2 LINE L2 0 3313 3228 2262 161 114 2 chr10 12213793 12214240 -128102525 + MER61D LTR ERV1 5 501 0 281 340 0 0 chr10 12214247 12214341 -128102424 - L2 LINE L2 -45 3227 3134 2092 117 3 0 chr10 12214357 12214657 -128102108 + AluSx SINE Alu 1 301 -11 437 167 115 0 chr10 12214659 12214755 -128102010 - MLT2B1 LTR ERVL -413 107 1 339 348 32 27 chr10 12214756 12214943 -128101822 - L2 LINE L2 -460 2854 2667 189 349 63 16 chr10 12214945 12215071 -128101694 - L2 LINE L2 -208 3064 2933 454 307 91 99 chr10 12215137 12215296 -128101469 - L2 LINE L2 -453 2861 2702 2746 122 26 5 chr10 12215296 12215715 -128101050 + MSTA LTR MaLR 1 428 0 454 307 91 99 chr10 12215715 12216213 -128100552 - L2 LINE L2 -612 2702 2209 1826 157 3 0 chr10 12216534 12216834 -128099931 - AluJo SINE Alu -11 301 1 2003 90 0 11 chr10 12216971 12217250 -128099515 + AluSx SINE Alu 35 310 -2 2024 114 14 0 chr10 12217876 12218165 -128098600 - AluSq SINE Alu -18 295 3 2155 81 46 0 chr10 12218506 12218789 -128097976 + AluSc SINE Alu 1 296 -13 2279 94 7 7 chr10 12218866 12219164 -128097601 + AluSg SINE Alu 1 298 -12 2270 96 20 7 chr10 12220063 12220366 -128096399 + AluSx SINE Alu 1 307 -5 377 262 64 21 chr10 12220399 12220586 -128096179 - L2 LINE L2 -1001 2313 2119 679 255 65 56 chr10 12220607 12220929 -128095836 + Charlie2 DNA MER1_type 1 325 -2457 1657 211 41 19 chr10 12220932 12221348 -128095417 + Charlie2 DNA MER1_type 1857 2281 -581 873 191 30 81 chr10 12221348 12221463 -128095302 + L1ME1 LINE L1 5939 6037 -129 2043 150 0 0 chr10 12221463 12221763 -128095002 - AluSx SINE Alu -11 301 2 873 191 30 81 chr10 12221763 12221883 -128094882 + L1ME1 LINE L1 6037 6162 -4 697 245 126 16 chr10 12221897 12222269 -128094496 + Charlie2 DNA MER1_type 2280 2692 -170 1491 96 5 0 chr10 12222269 12222467 -128094298 - AluSg/x SINE Alu -13 297 99 21 36 0 0 chr10 12222876 12222904 -128093861 + AT_rich Low_complexity Low_complexity 1 28 0 2374 92 0 0 chr10 12223009 12223304 -128093461 + AluSg SINE Alu 1 295 -15 460 237 124 12 chr10 12223368 12223537 -128093228 + L1ME3A LINE L1 5680 5867 -303 191 128 51 0 chr10 12224366 12224405 -128092360 + (CATA)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr10 12224698 12224734 -128092031 + AT_rich Low_complexity Low_complexity 1 36 0 368 257 73 0 chr10 12224758 12224867 -128091898 - L2 LINE L2 0 3313 3197 1181 145 67 0 chr10 12224966 12225159 -128091606 + MER46A DNA MER2_type 31 236 0 396 257 3 25 chr10 12226321 12226456 -128090309 + MIR SINE MIR 59 186 -61 355 278 126 17 chr10 12226826 12227056 -128089709 - MARNA DNA Mariner -198 388 134 531 151 315 0 chr10 12227142 12227288 -128089477 - MER44D DNA MER2_type -147 462 1 554 259 47 67 chr10 12227955 12228356 -128088409 + L1MEd LINE L1 860 1252 -4867 336 273 152 18 chr10 12228410 12228700 -128088065 + L1M1 LINE L1 2690 3014 -4551 1991 143 10 0 chr10 12229110 12229410 -128087355 - AluSx SINE Alu -9 303 1 926 196 0 6 chr10 12229709 12229877 -128086888 + AluJb SINE Alu 131 297 -15 204 274 48 83 chr10 12230640 12230808 -128085957 + L2 LINE L2 2917 3078 -194 181 229 0 49 chr10 12230872 12230933 -128085832 + L2 LINE L2 3251 3308 -5 1958 139 0 7 chr10 12231227 12231543 -128085222 - AluSx SINE Alu 0 314 1 23 68 0 0 chr10 12233341 12233385 -128083380 + GC_rich Low_complexity Low_complexity 1 44 0 24 67 0 0 chr10 12233544 12233589 -128083176 + GC_rich Low_complexity Low_complexity 1 45 0 185 0 0 39 chr10 12233690 12233716 -128083049 + (CGCGG)n Simple_repeat Simple_repeat 4 28 0 235 187 13 27 chr10 12233867 12233942 -128082823 + (CCG)n Simple_repeat Simple_repeat 2 75 0 477 241 55 65 chr10 12234181 12234380 -128082385 + MIR SINE MIR 12 208 -54 240 303 25 8 chr10 12234989 12235111 -128081654 + L2 LINE L2 3102 3225 -88 227 182 0 0 chr10 12235136 12235180 -128081585 + Alu SINE Alu 258 301 -1 2717 32 0 0 chr10 12235219 12235529 -128081236 - AluYa5 SINE Alu -1 310 1 234 232 18 0 chr10 12235563 12235619 -128081146 + MIR SINE MIR 205 261 -1 1896 148 10 0 chr10 12235621 12235911 -128080854 - AluSx SINE Alu -19 293 1 1703 219 152 20 chr10 12235929 12236423 -128080342 - L1MC4 LINE L1 -1 8041 7483 2338 84 3 0 chr10 12236751 12237084 -128079681 - AluSp SINE Alu 0 334 1 2229 112 3 10 chr10 12237084 12237388 -128079377 - AluSx SINE Alu -9 303 1 264 243 0 0 chr10 12237394 12237468 -128079297 + CT-rich Low_complexity Low_complexity 5 78 0 3191 178 122 6 chr10 12237724 12238399 -128078366 + L1MB7 LINE L1 5415 6167 -17 2305 104 0 7 chr10 12238761 12239070 -128077695 + AluSg SINE Alu 1 307 -3 521 198 0 0 chr10 12239442 12239543 -128077222 + L1M3 LINE L1 5605 5705 -466 757 115 0 0 chr10 12239543 12239680 -128077085 - AluSg/x SINE Alu 0 306 170 1101 159 18 36 chr10 12240099 12240319 -128076446 + AluJo SINE Alu 84 299 -13 4509 189 28 24 chr10 12240334 12240782 -128075983 - L1MB2 LINE L1 -2 6169 5724 2188 113 0 0 chr10 12240782 12241066 -128075699 + AluSx SINE Alu 1 284 -28 4509 189 28 24 chr10 12241066 12242216 -128074549 - L1MB2 LINE L1 -447 5724 4564 452 139 139 0 chr10 12242316 12242395 -128074370 - MLT1B LTR MaLR -300 90 1 5355 221 17 19 chr10 12242395 12243766 -128072999 - L1MB2 LINE L1 -2050 4096 2729 926 243 87 33 chr10 12243918 12244194 -128072571 - MLT1J2 LTR MaLR -147 303 13 466 242 167 11 chr10 12244198 12244384 -128072381 + HAL1 LINE L1 1581 1795 -712 1878 154 18 0 chr10 12244562 12244841 -128071924 - AluJb SINE Alu -28 284 1 2479 68 0 3 chr10 12244951 12245246 -128071519 - AluY SINE Alu -17 294 1 384 318 61 98 chr10 12245287 12245847 -128070918 - LTR67 LTR ERVL -3 554 16 361 200 0 11 chr10 12246222 12246312 -128070453 + HAL1 LINE L1 2270 2358 -149 1057 176 0 6 chr10 12246884 12247054 -128069711 - AluSx SINE Alu -143 169 1 331 308 0 11 chr10 12247089 12247180 -128069585 + MER45 DNA AcHobo 1 90 -88 2225 114 0 0 chr10 12247274 12247564 -128069201 + AluSq SINE Alu 1 290 -23 374 167 0 0 chr10 12247596 12247650 -128069115 + MLT1D LTR MaLR 352 405 -100 433 233 44 0 chr10 12247650 12247740 -128069025 - L1MC/D LINE L1 -2203 5605 5512 2358 107 0 0 chr10 12247955 12248255 -128068510 + AluSx SINE Alu 1 300 -12 1729 171 20 3 chr10 12248325 12248630 -128068135 + AluJb SINE Alu 1 310 -2 24 32 0 0 chr10 12249874 12249905 -128066860 + AT_rich Low_complexity Low_complexity 1 31 0 1929 150 5 48 chr10 12250395 12250707 -128066058 + L1MB8 LINE L1 5811 6106 -72 2214 113 0 10 chr10 12250707 12251009 -128065756 - AluSx SINE Alu -8 304 6 1929 150 5 48 chr10 12251009 12251075 -128065690 + L1MB8 LINE L1 6106 6173 -5 1203 144 24 34 chr10 12251835 12252043 -128064722 + AluSg/x SINE Alu 98 303 -9 991 113 0 0 chr10 12252047 12252180 -128064585 + AluSq/x SINE Alu 2 134 -179 291 136 23 0 chr10 12252189 12252233 -128064532 + AluS SINE Alu 230 274 -26 651 33 0 13 chr10 12252234 12252383 -128064382 + (GGAA)n Simple_repeat Simple_repeat 1 147 0 1214 50 17 17 chr10 12252383 12252563 -128064202 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2196 94 0 57 chr10 12253110 12253441 -128063324 - AluSx SINE Alu 0 312 1 1743 187 96 8 chr10 12254931 12255294 -128061471 + L1MCa LINE L1 103 497 -5929 2268 117 0 0 chr10 12255313 12255612 -128061153 - AluSg SINE Alu -7 303 5 258 172 0 31 chr10 12255714 12255778 -128060987 + CT-rich Low_complexity Low_complexity 1 62 0 1302 191 4 8 chr10 12255801 12256037 -128060728 - AluJo SINE Alu -77 235 1 3338 160 70 22 chr10 12256037 12256718 -128060047 + L1MCa LINE L1 482 1195 -5231 509 259 101 77 chr10 12257144 12257519 -128059246 + L1ME LINE L1 5389 5772 -349 2433 75 0 0 chr10 12257549 12257843 -128058922 + AluSc SINE Alu 1 294 -15 1063 208 48 111 chr10 12258079 12258423 -128058342 - MLT1A1 LTR MaLR 0 365 45 1758 142 53 11 chr10 12258423 12258705 -128058060 + AluJo SINE Alu 5 298 -14 1063 208 48 111 chr10 12258705 12258748 -128058017 - MLT1A1 LTR MaLR -320 45 1 180 0 0 0 chr10 12259409 12259429 -128057336 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1595 188 7 7 chr10 12259730 12260018 -128056747 + AluJo SINE Alu 1 288 -24 378 0 0 0 chr10 12260594 12260636 -128056129 + (A)n Simple_repeat Simple_repeat 1 42 0 1873 138 11 0 chr10 12261286 12261562 -128055203 + AluSx SINE Alu 1 279 -33 336 161 0 0 chr10 12261565 12261627 -128055138 + GA-rich Low_complexity Low_complexity 3 64 0 1295 182 57 109 chr10 12262969 12263177 -128053588 + L1MA10 LINE L1 5918 6135 -199 2370 105 0 0 chr10 12263177 12263482 -128053283 - AluSc SINE Alu -4 305 1 1871 152 28 7 chr10 12263487 12263777 -128052988 - AluJo SINE Alu -16 296 1 1295 182 57 109 chr10 12263777 12264002 -128052763 + L1MA10 LINE L1 6139 6334 0 3291 102 11 0 chr10 12265492 12265945 -128050820 - L1PA10 LINE L1 -32 6136 5679 627 64 0 0 chr10 12265944 12266022 -128050743 + L1PA10 LINE L1 5579 5656 -512 * 204 40 0 0 chr10 12266489 12266514 -128050251 + (TG)n Simple_repeat Simple_repeat 2 26 0 722 141 8 0 chr10 12267428 12267556 -128049209 + GA-rich Low_complexity Low_complexity 1 129 0 1940 152 0 16 chr10 12267842 12268157 -128048608 - AluJo SINE Alu -2 310 1 733 318 96 35 chr10 12268635 12269302 -128047463 - L2 LINE L2 -344 2970 2263 2224 101 0 17 chr10 12270270 12270602 -128046163 + AluSx SINE Alu 1 327 0 1606 203 14 35 chr10 12270857 12270899 -128045866 - MER58B DNA MER1_type -2079 341 300 1611 163 3 63 chr10 12270899 12271088 -128045677 - AluJo SINE Alu 0 303 104 1701 104 0 5 chr10 12271088 12271310 -128045455 + AluSg/x SINE Alu 85 305 -7 2149 107 0 27 chr10 12271311 12271611 -128045154 + AluSc SINE Alu 1 292 -17 1611 163 3 63 chr10 12271611 12271740 -128045025 - AluJo SINE Alu -198 105 1 1606 203 14 35 chr10 12271740 12272041 -128044724 - MER58B DNA MER1_type -2120 300 4 2382 97 3 0 chr10 12272044 12272343 -128044422 - AluSx SINE Alu -12 300 1 375 150 0 0 chr10 12272402 12272482 -128044283 - AluSc SINE Alu -24 275 196 997 160 19 0 chr10 12272627 12272783 -128043982 - Tigger3(Golem) DNA MER2_type -2870 159 1 242 243 0 43 chr10 12273060 12273130 -128043635 + L2 LINE L2 3201 3267 -5 1860 125 0 4 chr10 12273202 12273466 -128043299 + AluSx SINE Alu 39 301 -11 2158 141 0 3 chr10 12274595 12274907 -128041858 - AluSx SINE Alu -1 311 1 353 317 27 33 chr10 12275006 12275189 -128041576 + L2 LINE L2 3131 3312 -1 245 208 14 0 chr10 12275189 12275261 -128041504 + GA-rich Low_complexity Low_complexity 4 76 0 836 257 116 56 chr10 12275823 12276305 -128040460 + MLT1G1 LTR MaLR 83 593 -2 432 97 0 0 chr10 12276704 12276766 -128039999 + (TA)n Simple_repeat Simple_repeat 2 63 0 727 262 129 21 chr10 12276809 12277088 -128039677 + MER46C DNA MER2_type 1 309 -29 739 296 35 16 chr10 12277142 12277399 -128039366 + MIR SINE MIR 1 262 0 1390 201 92 3 chr10 12277423 12277588 -128039177 - AluJo SINE Alu -2 310 161 286 85 34 0 chr10 12277588 12277647 -128039118 + T-rich Low_complexity Low_complexity 2 62 0 1390 201 92 3 chr10 12277647 12277764 -128039001 - AluJo SINE Alu -151 161 3 2134 128 3 3 chr10 12278136 12278434 -128038331 + AluSx SINE Alu 1 298 -14 231 232 89 71 chr10 12278475 12278587 -128038178 - MLT2E LTR ERVL -477 151 38 834 227 131 65 chr10 12278778 12279267 -128037498 + MER113 DNA MER1_type? 1 521 0 5026 160 28 6 chr10 12279412 12280537 -128036228 - L1MB5 LINE L1 -8 6166 5015 2119 113 0 0 chr10 12280802 12281135 -128035630 + AluSg SINE Alu 1 333 0 323 227 0 0 chr10 12281357 12281423 -128035342 + L1MB1 LINE L1 6100 6165 -3 668 282 85 16 chr10 12281484 12281766 -128034999 + L1ME4a LINE L1 5502 5808 -313 1922 151 3 17 chr10 12281766 12282065 -128034700 + AluJb SINE Alu 1 295 -17 668 282 85 16 chr10 12282065 12282087 -128034678 + L1ME4a LINE L1 5808 5827 -294 2161 128 0 10 chr10 12282087 12282385 -128034380 + AluSx SINE Alu 1 295 -17 195 384 63 28 chr10 12282555 12282810 -128033955 + L2 LINE L2 2473 2736 -578 260 355 35 44 chr10 12283163 12283366 -128033399 + L3 LINE CR1 184 384 -1193 1952 164 0 0 chr10 12283936 12284234 -128032531 + AluSx SINE Alu 1 298 -14 2008 161 3 0 chr10 12284314 12284606 -128032159 + AluSx SINE Alu 1 293 -19 339 85 0 0 chr10 12284610 12284657 -128032108 + (TA)n Simple_repeat Simple_repeat 2 48 0 1087 238 70 45 chr10 12284791 12285190 -128031575 + MLT1I LTR MaLR 1 409 0 310 297 40 37 chr10 12285350 12285529 -128031236 + MIR SINE MIR 17 193 -63 201 39 0 0 chr10 12286321 12286347 -128030418 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2000 98 18 18 chr10 12286355 12286630 -128030135 - AluSx SINE Alu -32 280 6 316 100 0 0 chr10 12286630 12286670 -128030095 - Alu SINE Alu -260 40 1 1714 160 13 33 chr10 12286804 12287104 -128029661 - AluJb SINE Alu -18 294 1 476 324 14 9 chr10 12287104 12287320 -128029445 - L1M4 LINE L1 -1929 4217 4001 850 128 0 45 chr10 12287325 12287458 -128029307 + FRAM SINE Alu 33 159 -17 25 0 0 0 chr10 12287460 12287485 -128029280 + AT_rich Low_complexity Low_complexity 1 25 0 274 190 50 58 chr10 12287539 12287660 -128029105 + Charlie2 DNA MER1_type 2671 2790 -72 571 168 15 102 chr10 12287742 12287879 -128028886 - MER63 DNA MER1_type -311 751 1 319 155 138 0 chr10 12287924 12287982 -128028783 - L2 LINE L2 -3 3310 3245 538 208 96 0 chr10 12288617 12288742 -128028023 - MER58B DNA MER1_type -5 336 200 732 194 82 0 chr10 12288805 12288975 -128027790 + MER20 DNA MER1_type 36 219 0 386 276 56 47 chr10 12289147 12289402 -128027363 + L1ME4a LINE L1 5573 5833 -288 646 235 60 6 chr10 12289402 12289568 -128027197 - MER5B DNA MER1_type -1 177 3 386 276 56 47 chr10 12289568 12289634 -128027131 + L1ME4a LINE L1 5833 5897 -224 508 101 22 0 chr10 12289652 12289741 -128027024 + (TGGA)n Simple_repeat Simple_repeat 1 91 0 308 198 83 33 chr10 12289950 12290071 -128026694 - L1ME4a LINE L1 0 6121 5995 1953 125 3 53 chr10 12290600 12290776 -128025989 - AluSx SINE Alu -7 305 122 204 40 0 0 chr10 12290776 12290801 -128025964 + (TGG)n Simple_repeat Simple_repeat 1 25 0 2228 90 0 3 chr10 12290809 12291098 -128025667 - AluSq SINE Alu -25 288 1 1953 125 3 53 chr10 12291098 12291233 -128025532 - AluSx SINE Alu -197 115 1 22 56 0 0 chr10 12291846 12291882 -128024883 + AT_rich Low_complexity Low_complexity 1 36 0 2419 65 3 13 chr10 12292017 12292323 -128024442 - AluY SINE Alu -8 303 1 2063 138 0 3 chr10 12292578 12292882 -128023883 + AluSx SINE Alu 1 303 -9 907 167 26 26 chr10 12292894 12293050 -128023715 + AluJb SINE Alu 130 285 -27 1944 148 0 10 chr10 12293486 12293797 -128022968 + AluJb SINE Alu 1 308 -4 3260 151 93 63 chr10 12293988 12294274 -128022491 + L1MB2 LINE L1 5434 5710 -461 1725 94 0 4 chr10 12294274 12294508 -128022257 + AluY SINE Alu 62 294 -17 3260 151 93 63 chr10 12294508 12294931 -128021834 + L1MB2 LINE L1 5710 6164 -7 360 321 125 64 chr10 12295685 12296028 -128020737 + L2 LINE L2 2897 3260 -12 21 0 0 0 chr10 12296476 12296497 -128020268 + AT_rich Low_complexity Low_complexity 1 21 0 1194 231 73 43 chr10 12296936 12297304 -128019461 + L1MC4 LINE L1 7522 7900 -142 27 62 0 0 chr10 12297310 12297358 -128019407 + AT_rich Low_complexity Low_complexity 1 48 0 383 224 9 35 chr10 12300486 12300602 -128016163 + L1MC4 LINE L1 7929 8041 -1 24 77 0 0 chr10 12300632 12300684 -128016081 + AT_rich Low_complexity Low_complexity 1 52 0 2176 106 7 7 chr10 12300711 12301004 -128015761 - AluSx SINE Alu -19 293 1 280 204 224 0 chr10 12301204 12301302 -128015463 - MER20B DNA MER1_type -663 120 1 209 264 0 0 chr10 12303630 12303683 -128013082 - L2 LINE L2 -16 3297 3245 1793 187 88 78 chr10 12304494 12305007 -128011758 - MLT2B1 LTR ERVL 0 520 3 1744 140 19 0 chr10 12305256 12305513 -128011252 + AluJo SINE Alu 21 282 -30 213 65 0 0 chr10 12305513 12305544 -128011221 + (TC)n Simple_repeat Simple_repeat 2 32 0 378 0 0 0 chr10 12305544 12305586 -128011179 + (CA)n Simple_repeat Simple_repeat 1 42 0 769 163 0 8 chr10 12306177 12306300 -128010465 - FLAM_A SINE Alu -15 127 6 2230 136 0 0 chr10 12307651 12307959 -128008806 + AluSx SINE Alu 1 308 -4 3850 155 5 65 chr10 12308104 12308220 -128008545 + L1MB3 LINE L1 5451 5572 -611 2684 42 3 3 chr10 12308220 12308531 -128008234 + AluY SINE Alu 1 311 0 3850 155 5 65 chr10 12308531 12309012 -128007753 + L1MB3 LINE L1 5572 5993 -190 2322 79 7 0 chr10 12309012 12309302 -128007463 - AluSq SINE Alu -21 292 1 3850 155 5 65 chr10 12309302 12309482 -128007283 + L1MB3 LINE L1 5993 6182 -1 1728 160 7 0 chr10 12309876 12310158 -128006607 + L1MB3 LINE L1 5571 5854 -329 230 204 19 0 chr10 12310965 12311019 -128005746 + L2 LINE L2 3217 3271 -1 243 0 0 0 chr10 12311471 12311498 -128005267 + (CAA)n Simple_repeat Simple_repeat 1 27 0 609 112 19 47 chr10 12311740 12311847 -128004918 - FLAM_C SINE Alu -32 111 8 1829 136 4 0 chr10 12312328 12312585 -128004180 - AluSx SINE Alu -20 292 35 1839 168 62 54 chr10 12314729 12315152 -128001613 - MSTB LTR MaLR 0 426 1 1450 136 0 5 chr10 12315441 12315655 -128001110 + AluJb SINE Alu 1 213 -99 2236 108 7 0 chr10 12315880 12316185 -128000580 - AluSx SINE Alu -5 307 1 926 237 137 35 chr10 12316186 12316558 -128000207 - MLT1C LTR MaLR -52 415 6 1921 148 32 86 chr10 12316566 12316790 -127999975 - MLT1B LTR MaLR -6 384 190 1887 167 0 16 chr10 12316790 12317102 -127999663 - AluJo SINE Alu -4 308 2 1921 148 32 86 chr10 12317102 12317283 -127999482 - MLT1B LTR MaLR -200 190 1 226 163 61 0 chr10 12317416 12317465 -127999300 - MIR SINE MIR -16 246 195 504 254 6 21 chr10 12317797 12317959 -127998806 - MLT1K LTR MaLR -2 613 431 2574 60 0 0 chr10 12317959 12318257 -127998508 - AluY SINE Alu -13 298 1 487 120 8 103 chr10 12318381 12318433 -127998332 - L1MA2 LINE L1 0 6304 6249 183 100 0 0 chr10 12318433 12318463 -127998302 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1959 106 7 14 chr10 12318463 12318746 -127998019 - AluSx SINE Alu -31 281 1 487 120 8 103 chr10 12318746 12318809 -127997956 - L1MA2 LINE L1 -53 6251 6199 577 229 137 78 chr10 12318819 12319125 -127997640 - MLT1K LTR MaLR -162 426 103 1047 200 57 141 chr10 12319338 12319870 -127996895 + MLT1D LTR MaLR 17 624 -2 1924 234 139 63 chr10 12320200 12320363 -127996402 + L2 LINE L2 1818 1967 -1346 1996 141 20 0 chr10 12320363 12320660 -127996105 - AluSx SINE Alu -9 303 1 1924 234 139 63 chr10 12320660 12321233 -127995532 + L2 LINE L2 1967 2495 -818 1807 143 55 10 chr10 12321233 12321526 -127995239 - AluSx SINE Alu -6 306 1 1924 234 139 63 chr10 12321526 12321543 -127995222 + L2 LINE L2 2495 2509 -804 1658 160 29 13 chr10 12321543 12321856 -127994909 - L1MB4 LINE L1 0 6180 5863 1924 234 139 63 chr10 12321856 12322480 -127994285 + L2 LINE L2 2509 3309 -4 807 189 52 0 chr10 12322539 12322692 -127994073 - AluJo SINE Alu -149 163 3 923 196 12 0 chr10 12322724 12322887 -127993878 + AluJb SINE Alu 137 301 -11 252 304 11 43 chr10 12322912 12323004 -127993761 + MER5B DNA MER1_type 87 175 -3 428 298 76 18 chr10 12323376 12323547 -127993218 - MIR SINE MIR -73 189 9 2192 119 3 6 chr10 12323729 12324040 -127992725 + AluSx SINE Alu 3 312 0 1214 176 0 52 chr10 12324043 12324293 -127992472 + MLT1B LTR MaLR 1 237 -153 446 279 20 9 chr10 12324524 12324708 -127992057 + L1MA4A LINE L1 5686 5870 -300 2158 108 7 3 chr10 12324711 12324999 -127991766 + AluSx SINE Alu 1 289 -23 1179 153 0 0 chr10 12325052 12325215 -127991550 - AluJb SINE Alu -15 297 135 635 311 48 9 chr10 12325420 12325648 -127991117 - MIR SINE MIR -24 238 2 2103 102 0 20 chr10 12326004 12326297 -127990468 - AluSx SINE Alu -17 295 9 393 349 40 21 chr10 12326308 12326541 -127990224 - MIR SINE MIR -25 237 1 356 173 25 25 chr10 12326786 12326867 -127989898 + MER5B DNA MER1_type 25 105 -73 2079 142 0 19 chr10 12326885 12327196 -127989569 - AluSx SINE Alu -7 305 1 1776 157 7 7 chr10 12327204 12327491 -127989274 - AluJb SINE Alu -25 287 1 2147 119 0 3 chr10 12327550 12327844 -127988921 - AluSg1 SINE Alu -16 293 1 1905 151 7 62 chr10 12327865 12328269 -127988496 + MLT1B LTR MaLR 1 382 -8 251 344 0 0 chr10 12328540 12328630 -127988135 + GA-rich Low_complexity Low_complexity 2 91 0 304 291 52 37 chr10 12329321 12329455 -127987310 - MIR3 SINE MIR -4 204 69 461 328 47 81 chr10 12329579 12329960 -127986805 + L2 LINE L2 2902 3269 -3 673 196 159 0 chr10 12330010 12330148 -127986617 + FRAM SINE Alu 9 168 -8 2686 78 33 19 chr10 12330217 12330420 -127986345 - THE1B LTR MaLR 0 364 152 2359 103 0 3 chr10 12330420 12330720 -127986045 + AluSc SINE Alu 2 300 -9 2686 78 33 19 chr10 12330720 12330875 -127985890 - THE1B LTR MaLR -212 152 1 831 131 0 36 chr10 12331333 12331470 -127985295 - FRAM SINE Alu -5 171 40 2180 120 13 0 chr10 12332519 12332696 -127984069 - AluSx SINE Alu -7 305 121 230 0 33 0 chr10 12332696 12332726 -127984039 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2180 120 13 0 chr10 12332726 12332849 -127983916 - AluSx SINE Alu -191 121 1 517 195 49 41 chr10 12332850 12332973 -127983792 - L2 LINE L2 -3 3310 3187 822 134 0 0 chr10 12333654 12333766 -127982999 - FLAM_C SINE Alu -31 112 1 651 244 80 19 chr10 12333773 12333986 -127982779 - MLT1C LTR MaLR 0 467 242 2335 89 3 7 chr10 12334060 12334362 -127982403 - AluSp SINE Alu -6 307 7 2062 141 3 7 chr10 12334476 12334774 -127981991 - AluJb SINE Alu -15 297 1 390 262 10 0 chr10 12334836 12334939 -127981826 + L1ME LINE L1 5606 5709 -412 27 49 0 0 chr10 12335076 12335117 -127981648 + AT_rich Low_complexity Low_complexity 1 41 0 192 40 0 0 chr10 12335347 12335372 -127981393 + (CA)n Simple_repeat Simple_repeat 2 26 0 1781 167 0 17 chr10 12335822 12336116 -127980649 + AluJo SINE Alu 24 312 0 2452 77 3 6 chr10 12336216 12336528 -127980237 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 12336688 12336711 -127980054 + GC_rich Low_complexity Low_complexity 1 23 0 593 279 101 68 chr10 12337692 12337848 -127978917 - L2 LINE L2 -6 3307 3158 2419 77 0 3 chr10 12337848 12338148 -127978617 + AluSq SINE Alu 1 299 -14 593 279 101 68 chr10 12338148 12338389 -127978376 - L2 LINE L2 -155 3158 2897 1596 161 58 33 chr10 12338398 12338662 -127978103 + L1MA9 LINE L1 5976 6251 -61 2027 160 0 3 chr10 12338662 12338968 -127977797 + AluJo SINE Alu 1 305 -7 1596 161 58 33 chr10 12338968 12339032 -127977733 + L1MA9 LINE L1 6251 6312 0 293 291 168 16 chr10 12339037 12339346 -127977419 - L2 LINE L2 -411 2903 2548 2579 130 59 17 chr10 12340056 12340465 -127976300 - MSTB LTR MaLR 0 426 1 1435 239 30 16 chr10 12340637 12341006 -127975759 + MER87 LTR ERV1 168 541 0 637 226 155 11 chr10 12341006 12341187 -127975578 - MIR SINE MIR -4 258 52 7174 168 149 52 chr10 12341255 12342854 -127973911 + MER52A LTR ERV1 1 1755 0 811 239 56 17 chr10 12342860 12343094 -127973671 + L2 LINE L2 2432 2674 -640 41772 31 21 1 chr10 12343095 12349124 -127967641 - L1PA2 LINE L1 -1 6154 4 654 90 0 0 chr10 12349144 12349233 -127967532 - THE1B-int LTR MaLR -1183 397 309 518 136 12 0 chr10 12349237 12349318 -127967447 - THE1B LTR MaLR -83 281 200 1064 279 72 16 chr10 12349319 12349869 -127966896 + L2 LINE L2 2661 3311 -2 290 279 95 34 chr10 12349845 12349991 -127966774 - MIR SINE MIR -60 148 18 * 1694 161 3 27 chr10 12350201 12350493 -127966272 - AluJo SINE Alu -21 291 7 2172 149 33 30 chr10 12350588 12350951 -127965814 - THE1B LTR MaLR 0 364 1 2337 105 0 0 chr10 12351331 12351626 -127965139 - AluSx SINE Alu -17 295 1 34 0 0 0 chr10 12352085 12352119 -127964646 + AT_rich Low_complexity Low_complexity 1 34 0 2387 79 0 3 chr10 12352976 12353268 -127963497 - AluSx SINE Alu -21 291 1 484 152 7 7 chr10 12353927 12354065 -127962700 + (CGGGG)n Simple_repeat Simple_repeat 4 141 0 23 0 0 0 chr10 12354360 12354383 -127962382 + GC_rich Low_complexity Low_complexity 1 23 0 513 229 125 85 chr10 12354955 12355331 -127961434 - MER115 DNA AcHobo -27 666 276 354 253 112 54 chr10 12355784 12355993 -127960772 - MIR SINE MIR -35 227 8 183 306 357 11 chr10 12356320 12356777 -127959988 - L2 LINE L2 -722 2592 1978 2402 105 0 0 chr10 12357733 12358038 -127958727 + AluSq SINE Alu 6 310 -3 1723 73 21 59 chr10 12358038 12358324 -127958441 + L1MA2 LINE L1 6029 6303 -1 1836 110 4 0 chr10 12358336 12358572 -127958193 + AluSq SINE Alu 1 237 -76 1655 142 8 0 chr10 12359908 12360148 -127956617 - AluJo SINE Alu -10 302 61 252 66 0 131 chr10 12360152 12360213 -127956552 - AluJo SINE Alu -151 151 99 2175 138 0 0 chr10 12360286 12360591 -127956174 + AluSx SINE Alu 1 305 -7 223 250 117 0 chr10 12360677 12360737 -127956028 + MIR3 SINE MIR 126 192 -16 2592 83 0 0 chr10 12361466 12361778 -127954987 - AluSx SINE Alu 0 312 1 199 266 125 31 chr10 12362285 12362349 -127954416 - L2 LINE L2 -2 3270 3201 217 222 0 0 chr10 12362454 12362499 -127954266 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 2241 109 0 26 chr10 12363798 12364102 -127952663 - AluSx SINE Alu -16 296 1 346 262 115 16 chr10 12364113 12364304 -127952461 - L1ME4a LINE L1 -9 6112 5903 864 246 75 0 chr10 12364327 12364526 -127952239 - MIR SINE MIR -17 245 32 302 232 116 39 chr10 12364626 12364781 -127951984 - L1ME4a LINE L1 -355 5766 5600 2159 120 7 7 chr10 12364781 12365073 -127951692 + AluSx SINE Alu 1 292 -20 1822 134 0 22 chr10 12365445 12365714 -127951051 - AluSx SINE Alu 0 312 50 2150 121 7 16 chr10 12366721 12367026 -127949739 + AluSx SINE Alu 1 302 -10 2107 102 49 0 chr10 12368433 12368717 -127948048 - AluSx SINE Alu -14 298 1 1814 178 13 45 chr10 12370599 12370753 -127946012 + MLT1A1 LTR MaLR 1 158 -207 2422 99 0 3 chr10 12370753 12371066 -127945699 + AluSq SINE Alu 1 312 -1 1814 178 13 45 chr10 12371066 12371288 -127945477 + MLT1A1 LTR MaLR 158 365 0 443 269 140 26 chr10 12371499 12371692 -127945073 - MIR SINE MIR -12 250 36 185 227 23 0 chr10 12372689 12372733 -127944032 - MIR3 SINE MIR -48 160 116 225 236 8 126 chr10 12372803 12372889 -127943876 + L2 LINE L2 2141 2209 -1105 862 203 47 33 chr10 12372889 12373101 -127943664 + MER20 DNA MER1_type 3 217 -2 225 236 8 126 chr10 12373101 12373141 -127943624 + L2 LINE L2 2209 2252 -1062 340 151 0 96 chr10 12373197 12373270 -127943495 - MLT1G3 LTR MaLR -82 513 448 * 616 263 96 12 chr10 12373262 12373502 -127943263 - MLT1G3 LTR MaLR -193 337 78 827 317 50 24 chr10 12373537 12373633 -127943132 - L2 LINE L2 -1 3312 3220 813 173 0 0 chr10 12373633 12373766 -127942999 + FLAM_C SINE Alu 1 133 0 827 317 50 24 chr10 12373766 12374126 -127942639 - L2 LINE L2 -93 3220 2844 2209 95 14 7 chr10 12375993 12376289 -127940476 + AluSx SINE Alu 1 298 -14 284 340 118 13 chr10 12376776 12376929 -127939836 - MIR SINE MIR -37 225 57 2109 151 3 0 chr10 12378031 12378336 -127938429 - AluJo SINE Alu -2 310 5 389 200 0 0 chr10 12378340 12378415 -127938350 - L1M4 LINE L1 -1502 4644 4570 675 276 63 57 chr10 12378469 12378977 -127937788 - L1MC4 LINE L1 -29 8013 7503 1188 148 40 20 chr10 12379147 12379349 -127937416 + AluJo SINE Alu 85 290 -22 1952 218 100 42 chr10 12379363 12379422 -127937343 - MLT1E LTR MaLR -4 589 535 2444 88 0 0 chr10 12379422 12379729 -127937036 - AluY SINE Alu -4 307 1 1952 218 100 42 chr10 12379729 12380219 -127936546 - MLT1E LTR MaLR -58 535 8 368 293 39 14 chr10 12380243 12380460 -127936305 + MLT1L LTR MaLR 359 605 -10 2347 93 0 7 chr10 12380642 12380942 -127935823 + AluSx SINE Alu 1 298 -14 1545 130 0 9 chr10 12381252 12381475 -127935290 + AluSg/x SINE Alu 65 285 -27 315 253 20 91 chr10 12381476 12381575 -127935190 + L1MC4 LINE L1 6614 6705 -1337 2789 196 19 21 chr10 12381989 12382113 -127934652 - L1MB8 LINE L1 -5 6173 6050 2370 112 0 0 chr10 12382113 12382418 -127934347 + AluSx SINE Alu 1 305 -7 2789 196 19 21 chr10 12382418 12382911 -127933854 - L1MB8 LINE L1 -128 6050 5557 2652 64 0 0 chr10 12383002 12383313 -127933452 - AluY SINE Alu 0 311 1 460 188 18 27 chr10 12383663 12383775 -127932990 - MER113 DNA MER1_type? -410 111 1 1079 152 53 6 chr10 12383810 12383981 -127932784 - AluSx SINE Alu -133 179 1 249 211 0 35 chr10 12384230 12384287 -127932478 - L2 LINE L2 -14 3299 3245 213 277 168 10 chr10 12384439 12384540 -127932225 + MIR SINE MIR 76 192 -70 344 273 153 6 chr10 12384833 12385009 -127931756 + LTR16C LTR ERVL 286 487 -4 1741 165 26 0 chr10 12386134 12386406 -127930359 - AluJb SINE Alu -12 300 22 2483 94 3 0 chr10 12386415 12386723 -127930042 - AluSp SINE Alu -4 309 1 2281 123 0 0 chr10 12386804 12387096 -127929669 - AluSx SINE Alu -20 292 1 509 228 48 42 chr10 12387120 12387309 -127929456 - L1MC5 LINE L1 -36 7925 7736 1225 257 76 5 chr10 12387827 12388197 -127928568 + MER20B DNA MER1_type 32 427 -356 1921 135 19 62 chr10 12388219 12388544 -127928221 - AluJb SINE Alu -1 311 1 374 223 61 47 chr10 12388646 12388794 -127927971 + MER20B DNA MER1_type 459 608 -175 369 269 111 0 chr10 12388844 12388952 -127927813 + HAL1 LINE L1 835 954 -1553 1782 148 81 0 chr10 12388953 12389224 -127927541 - AluJo SINE Alu -19 293 1 1291 60 0 0 chr10 12389241 12389390 -127927375 + AluSc SINE Alu 152 300 -9 226 217 43 22 chr10 12389475 12389567 -127927198 + (TA)n Simple_repeat Simple_repeat 1 94 0 659 256 154 11 chr10 12389593 12389832 -127926933 + HAL1 LINE L1 1096 1384 -1123 2374 98 7 0 chr10 12389832 12390137 -127926628 + AluSq SINE Alu 1 307 -6 659 256 154 11 chr10 12390137 12390182 -127926583 + HAL1 LINE L1 1384 1421 -1086 506 283 138 36 chr10 12390440 12390744 -127926021 + LTR16C LTR ERVL 157 491 0 2373 104 25 6 chr10 12390747 12391102 -127925663 - THE1B LTR MaLR -2 362 1 840 93 0 0 chr10 12391621 12391729 -127925036 + AluSg/x SINE Alu 189 296 -13 1085 199 0 15 chr10 12391739 12391945 -127924820 + AluJo SINE Alu 86 288 -24 2106 128 0 0 chr10 12391981 12392262 -127924503 + AluSx SINE Alu 20 300 -12 805 154 0 22 chr10 12392356 12392492 -127924273 + FLAM_C SINE Alu 1 133 -10 1844 198 73 22 chr10 12392497 12392906 -127923859 - MLT2B1 LTR ERVL -90 430 1 2075 115 0 4 chr10 12393269 12393548 -127923217 - AluSx SINE Alu -34 278 1 1517 151 55 19 chr10 12393630 12393924 -127922841 - AluJo SINE Alu 0 313 10 2414 76 0 0 chr10 12393945 12394234 -127922531 - AluSx SINE Alu -19 293 5 662 218 140 10 chr10 12394846 12395039 -127921726 - MER20B DNA MER1_type -1 218 1 367 209 19 57 chr10 12395702 12395807 -127920958 - ORSL DNA AcHobo -2 273 173 25 51 0 0 chr10 12396088 12396127 -127920638 + AT_rich Low_complexity Low_complexity 1 39 0 1557 198 63 11 chr10 12396323 12396687 -127920078 - MLT1B LTR MaLR -4 386 4 2244 113 0 3 chr10 12397042 12397344 -127919421 - AluSx SINE Alu -11 301 1 183 308 119 21 chr10 12397598 12397741 -127919024 + L2 LINE L2 2949 3105 -208 2260 105 0 40 chr10 12397747 12398070 -127918695 - AluSx SINE Alu -2 310 1 2461 92 0 0 chr10 12398355 12398658 -127918107 + AluSg SINE Alu 1 303 -7 404 150 25 0 chr10 12398824 12398904 -127917861 + AluS SINE Alu 230 311 -1 276 348 70 25 chr10 12398905 12399063 -127917702 - L2 LINE L2 -2813 501 337 1017 266 69 0 chr10 12399088 12399437 -127917328 - MER93b LTR ERV1 0 373 1 201 158 0 0 chr10 12399545 12399583 -127917182 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 1678 204 6 28 chr10 12400085 12400403 -127916362 - AluJb SINE Alu -1 311 1 207 258 189 45 chr10 12400665 12400797 -127915968 + MER5A DNA MER1_type 1 151 -38 192 200 0 0 chr10 12400842 12400882 -127915883 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 12401865 12401886 -127914879 + AT_rich Low_complexity Low_complexity 1 21 0 664 126 4 6 chr10 12401902 12402141 -127914624 + AluJo SINE Alu 10 296 -16 280 212 34 137 chr10 12402162 12402250 -127914515 - MIR3 SINE MIR -65 143 74 1546 234 91 34 chr10 12402250 12402353 -127914412 - MLT1D LTR MaLR -3 502 406 1739 180 42 0 chr10 12402353 12402636 -127914129 + AluJb SINE Alu 1 295 -17 1546 234 91 34 chr10 12402636 12403006 -127913759 - MLT1D LTR MaLR -99 406 2 280 212 34 137 chr10 12403006 12403063 -127913702 - MIR3 SINE MIR -134 74 13 1890 168 94 88 chr10 12403417 12403552 -127913213 - MER4A LTR ERV1 0 872 739 1987 113 40 0 chr10 12403552 12403827 -127912938 + AluSx SINE Alu 1 286 -26 1890 168 94 88 chr10 12403827 12404225 -127912540 - MER4A LTR ERV1 -133 739 345 7951 54 4 4 chr10 12404225 12405232 -127911533 + LTR13 LTR ERVK 1 1007 0 591 15 0 0 chr10 12405242 12405310 -127911455 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 1890 168 94 88 chr10 12405310 12405425 -127911340 - MER4A LTR ERV1 -535 337 1 1777 95 61 23 chr10 12405957 12406221 -127910544 + AluSq SINE Alu 32 305 -8 786 129 117 37 chr10 12406405 12406494 -127910271 + MER45A DNA AcHobo 2 82 -1499 1799 153 24 7 chr10 12406494 12406789 -127909976 - AluJb SINE Alu -12 300 1 786 129 117 37 chr10 12406789 12406862 -127909903 + MER45A DNA AcHobo 82 177 -1 651 233 6 0 chr10 12406995 12407377 -127909388 + (CA)n Simple_repeat Simple_repeat 1 384 0 1924 145 30 0 chr10 12407535 12407831 -127908934 + AluJo SINE Alu 1 305 -7 367 311 17 56 chr10 12408161 12408341 -127908424 - L1M4 LINE L1 -6294 561 91 1914 131 20 33 chr10 12408438 12408743 -127908022 - AluJo SINE Alu -9 303 3 408 331 7 15 chr10 12409350 12409486 -127907279 + MIR3 SINE MIR 15 149 -59 399 222 0 0 chr10 12409492 12409564 -127907201 + AluJ/FLAM SINE Alu 1 72 -230 345 118 140 54 chr10 12409547 12409640 -127907125 + LTR8A LTR ERV1 468 568 -159 * 1796 159 0 28 chr10 12409777 12410090 -127906675 + AluJo SINE Alu 1 305 0 2325 102 3 3 chr10 12410128 12410431 -127906334 + AluSx SINE Alu 1 303 -9 1554 93 9 26 chr10 12410930 12411156 -127905609 - AluJo SINE Alu -90 222 1 2288 112 3 3 chr10 12411958 12412262 -127904503 - AluSg SINE Alu -6 304 1 742 148 33 0 chr10 12412262 12412384 -127904381 - FLAM_A SINE Alu -7 126 1 2555 51 0 7 chr10 12412399 12412694 -127904071 - AluY SINE Alu -18 293 1 421 233 71 56 chr10 12412695 12412935 -127903830 - L1ME3A LINE L1 -222 5948 5694 440 132 7 176 chr10 12413050 12413142 -127903623 + MLT1B LTR MaLR 3 109 -281 2018 108 11 0 chr10 12413142 12413420 -127903345 - AluSp SINE Alu -10 303 23 440 132 7 176 chr10 12413420 12413455 -127903310 + MLT1B LTR MaLR 109 109 -281 2614 132 26 0 chr10 12413455 12413878 -127902887 + L1PB3 LINE L1 5721 6154 0 25 65 0 0 chr10 12413885 12413931 -127902834 + AT_rich Low_complexity Low_complexity 1 46 0 1249 188 81 4 chr10 12414072 12414343 -127902422 + MLT1B LTR MaLR 95 386 -4 452 276 86 33 chr10 12414348 12414558 -127902207 - L1ME3A LINE L1 -617 5547 5327 267 313 31 0 chr10 12414574 12414670 -127902095 - L1ME3A LINE L1 -860 5286 5188 539 55 0 0 chr10 12414677 12414750 -127902015 - L1PA5 LINE L1 -3 6151 6079 2007 125 14 17 chr10 12414762 12415050 -127901715 - AluSx SINE Alu -25 287 1 686 292 164 53 chr10 12415050 12415151 -127901614 - L1ME3A LINE L1 -1369 4777 4689 3356 121 27 0 chr10 12415151 12415662 -127901103 - MER1A DNA MER1_type -1 526 2 686 292 164 53 chr10 12415662 12416029 -127900736 - L1ME3A LINE L1 -1457 4689 4257 1028 145 63 26 chr10 12416029 12416315 -127900450 - MLT2A2 LTR ERVL 0 453 259 1007 167 18 181 chr10 12417569 12417911 -127898854 + AluJo SINE Alu 2 287 -15 21 0 0 0 chr10 12418973 12418994 -127897771 + AT_rich Low_complexity Low_complexity 1 21 0 2362 106 0 0 chr10 12419084 12419386 -127897379 - AluSx SINE Alu -10 302 1 449 270 54 13 chr10 12420714 12420862 -127895903 + MIR SINE MIR 41 197 -63 2377 95 3 3 chr10 12421122 12421428 -127895337 - AluSx SINE Alu -6 306 1 2487 73 3 0 chr10 12421471 12421772 -127894993 - AluY SINE Alu -9 302 1 2016 153 0 3 chr10 12421894 12422201 -127894564 - AluJb SINE Alu -6 306 1 2102 99 17 0 chr10 12423417 12423710 -127893055 - AluSx SINE Alu -14 298 1 3463 186 29 17 chr10 12423725 12424151 -127892614 + L1MB3 LINE L1 5476 5915 -268 2210 119 0 0 chr10 12424151 12424463 -127892302 + AluSx SINE Alu 1 312 0 3463 186 29 17 chr10 12424463 12424736 -127892029 + L1MB3 LINE L1 5915 6183 0 718 221 97 51 chr10 12425289 12425506 -127891259 + MLT1E1 LTR MaLR 1 227 -427 2148 95 0 0 chr10 12426634 12426918 -127889847 + AluSx SINE Alu 1 284 -28 233 323 30 30 chr10 12427240 12427339 -127889426 + L2 LINE L2 3144 3242 -30 1997 122 0 29 chr10 12427345 12427657 -127889108 - AluSq SINE Alu 0 313 11 1943 109 0 32 chr10 12428045 12428356 -127888409 - AluSx SINE Alu -1 311 11 864 201 13 0 chr10 12428474 12428633 -127888132 + AluJb SINE Alu 139 299 -13 2111 113 7 0 chr10 12428734 12429035 -127887730 + AluSq SINE Alu 1 303 -10 764 267 119 52 chr10 12429077 12429267 -127887498 - L1ME4a LINE L1 -77 6044 5868 2160 111 0 0 chr10 12429267 12429564 -127887201 - AluSx SINE Alu -15 297 1 764 267 119 52 chr10 12429564 12429868 -127886897 - L1ME4a LINE L1 -253 5868 5517 2038 107 0 7 chr10 12429873 12430171 -127886594 + AluSc SINE Alu 1 296 -13 1973 124 0 3 chr10 12430180 12430483 -127886282 + AluSx SINE Alu 1 302 0 23 33 0 0 chr10 12430567 12430597 -127886168 + AT_rich Low_complexity Low_complexity 1 30 0 327 329 118 32 chr10 12430800 12430964 -127885801 - L1ME4a LINE L1 -941 5205 5056 1693 163 3 10 chr10 12430964 12431259 -127885506 - AluJb SINE Alu -13 299 7 327 329 118 32 chr10 12431259 12431374 -127885391 - L1ME4a LINE L1 -1090 5056 4902 288 257 54 0 chr10 12431610 12431684 -127885081 - MIR SINE MIR -89 173 96 2344 32 3 3 chr10 12431847 12432151 -127884614 - AluY SINE Alu 0 304 1 26 0 0 0 chr10 12432351 12432377 -127884388 + AT_rich Low_complexity Low_complexity 1 26 0 321 295 67 7 chr10 12432502 12432651 -127884114 - AluSp SINE Alu -49 254 97 1964 117 21 0 chr10 12433015 12433296 -127883469 - AluSx SINE Alu -25 287 1 208 322 8 25 chr10 12433568 12433689 -127883076 + CT-rich Low_complexity Low_complexity 4 122 0 1609 154 34 17 chr10 12433844 12434137 -127882628 + AluJo SINE Alu 1 298 -14 183 229 0 115 chr10 12434567 12434628 -127882137 + MIR SINE MIR 93 146 -116 310 247 103 10 chr10 12434876 12434973 -127881792 + MIR SINE MIR 98 203 -59 1617 157 0 52 chr10 12435095 12435401 -127881364 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr10 12436754 12436790 -127879975 + AT_rich Low_complexity Low_complexity 1 36 0 4059 183 30 50 chr10 12438203 12438893 -127877872 - L1MB5 LINE L1 0 6174 5472 2115 78 0 11 chr10 12438893 12439216 -127877549 - AluY SINE Alu 0 320 1 1906 150 0 3 chr10 12439216 12439516 -127877249 - AluJb SINE Alu -7 305 7 4059 183 30 50 chr10 12439516 12439774 -127876991 - L1MB5 LINE L1 -700 5474 5259 1756 161 3 0 chr10 12440019 12440304 -127876461 - AluJo SINE Alu -16 296 11 368 287 88 15 chr10 12440402 12440538 -127876227 + MIR3 SINE MIR 32 177 -31 2125 99 0 3 chr10 12440756 12441064 -127875701 + AluSx SINE Alu 1 307 0 221 339 61 57 chr10 12441111 12441356 -127875409 - L2 LINE L2 -59 3213 2968 1807 139 10 0 chr10 12441641 12441929 -127874836 + AluJo SINE Alu 3 293 -19 2035 126 3 0 chr10 12442172 12442474 -127874291 - AluSx SINE Alu -4 308 6 2518 167 19 19 chr10 12442479 12442952 -127873813 - L1PB4 LINE L1 -118 6038 5566 40 0 0 0 chr10 12444326 12444366 -127872399 + AT_rich Low_complexity Low_complexity 1 40 0 1926 141 0 3 chr10 12445182 12445480 -127871285 - AluSx SINE Alu -15 297 1 207 108 0 0 chr10 12445572 12445601 -127871164 + (T)n Simple_repeat Simple_repeat 1 32 -5 696 167 33 8 chr10 12445601 12445721 -127871044 + FLAM_A SINE Alu 1 123 -10 207 108 0 0 chr10 12445721 12445728 -127871037 + (T)n Simple_repeat Simple_repeat 31 37 0 2102 118 0 0 chr10 12445745 12446042 -127870723 + AluSq SINE Alu 1 297 -16 1960 116 0 4 chr10 12446321 12446598 -127870167 - AluSc SINE Alu -2 307 32 2033 106 7 7 chr10 12447454 12447747 -127869018 + AluSx SINE Alu 1 293 -19 2262 104 0 13 chr10 12447822 12448138 -127868627 + AluSx SINE Alu 1 312 0 211 192 96 19 chr10 12448741 12448793 -127867972 + L2 LINE L2 3217 3272 0 1143 115 0 0 chr10 12449035 12449200 -127867565 - AluSg/x SINE Alu -14 296 132 2119 117 0 0 chr10 12449200 12449498 -127867267 - AluSx SINE Alu -14 298 1 3156 190 82 20 chr10 12449815 12450500 -127866265 + MER44D DNA MER2_type 5 603 -2 595 270 123 51 chr10 12451491 12451905 -127864860 - L1MC/D LINE L1 -721 5964 5651 290 327 65 42 chr10 12452034 12452389 -127864376 + L1M4 LINE L1 4797 5159 -987 2173 99 7 0 chr10 12452546 12452840 -127863925 + AluSg SINE Alu 1 296 -14 213 39 0 0 chr10 12452923 12452949 -127863816 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 12453061 12453081 -127863684 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 1848 148 0 3 chr10 12453083 12453386 -127863379 - AluSx SINE Alu -4 308 7 1953 270 117 26 chr10 12453491 12453784 -127862981 - L1MC/D LINE L1 -2210 4330 4065 2145 84 23 10 chr10 12453784 12454092 -127862673 + AluSx SINE Alu 1 312 0 324 0 0 0 chr10 12454095 12454131 -127862634 + (TA)n Simple_repeat Simple_repeat 2 37 0 1953 270 117 26 chr10 12454131 12455060 -127861705 - L1MC/D LINE L1 -2476 4064 2992 1764 113 11 4 chr10 12455108 12455374 -127861391 + AluSx SINE Alu 29 296 -16 541 245 165 40 chr10 12455374 12455647 -127861118 - L1MEc LINE L1 -3944 2634 2290 192 217 0 0 chr10 12455958 12456004 -127860761 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2367 58 0 0 chr10 12456068 12456360 -127860405 - AluY SINE Alu 0 311 20 1586 105 0 4 chr10 12456506 12456735 -127860030 + AluSc SINE Alu 69 296 -13 1038 150 0 0 chr10 12456735 12456895 -127859870 + AluSg/x SINE Alu 134 293 -19 1457 201 3 3 chr10 12457039 12457323 -127859442 - AluJo SINE Alu -28 284 1 1265 262 36 40 chr10 12457481 12457657 -127859108 - L1MC4a LINE L1 -1813 5995 5820 2122 114 0 0 chr10 12457657 12457954 -127858811 - AluSx SINE Alu -15 297 1 1265 262 36 40 chr10 12457954 12458090 -127858675 - L1MC4a LINE L1 -1988 5820 5685 513 141 0 0 chr10 12458090 12458168 -127858597 - MADE1 DNA Mariner -2 78 1 1265 262 36 40 chr10 12458168 12458350 -127858415 - L1MC4a LINE L1 -2123 5685 5502 404 312 58 0 chr10 12458381 12458519 -127858246 - L1MEc LINE L1 -4927 1794 1649 719 231 35 20 chr10 12458521 12458720 -127858045 - LTR33 LTR ERVL -19 502 301 359 235 87 26 chr10 12458799 12458914 -127857851 - LTR33 LTR ERVL -377 144 23 309 26 0 0 chr10 12458996 12459034 -127857731 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2070 103 0 0 chr10 12459037 12459319 -127857446 - AluSx SINE Alu -30 282 1 306 89 22 0 chr10 12459522 12459567 -127857198 - Alu SINE Alu -254 46 1 2191 94 0 0 chr10 12459992 12460318 -127856447 - AluSx SINE Alu 0 326 1 205 329 43 67 chr10 12460366 12460576 -127856189 + L2 LINE L2 2630 2834 -480 2318 76 0 3 chr10 12460756 12461058 -127855707 + AluSc SINE Alu 1 301 -8 218 308 33 44 chr10 12461174 12461265 -127855500 - MER5A DNA MER1_type -27 162 73 969 233 268 6 chr10 12461620 12461933 -127854832 + MSTD LTR MaLR 2 396 0 1678 153 28 17 chr10 12462786 12463073 -127853692 + AluJb SINE Alu 1 290 -22 698 218 8 8 chr10 12463491 12463624 -127853141 + FLAM_C SINE Alu 1 133 0 1639 79 96 68 chr10 12464391 12464671 -127852094 - AluSg SINE Alu -22 288 1 380 23 0 0 chr10 12464671 12464715 -127852050 - AluY SINE Alu -258 44 1 2237 76 3 0 chr10 12465155 12465444 -127851321 + AluSx SINE Alu 1 290 -22 1462 179 10 13 chr10 12466156 12466458 -127850307 - AluJo SINE Alu -11 301 1 742 115 0 0 chr10 12466481 12466585 -127850180 - AluSg/x SINE Alu -88 222 119 2475 49 0 3 chr10 12467039 12467345 -127849420 + AluY SINE Alu 1 305 -6 677 194 0 16 chr10 12467490 12467619 -127849146 + FLAM_A SINE Alu 2 128 -5 2225 87 0 13 chr10 12469306 12469616 -127847149 + AluSx SINE Alu 1 306 -6 1805 141 30 17 chr10 12469779 12470077 -127846688 - AluSx SINE Alu -10 302 1 2233 105 0 0 chr10 12470576 12470880 -127845885 + AluSg SINE Alu 1 304 -6 1715 150 7 23 chr10 12470987 12471294 -127845471 + AluSx SINE Alu 1 302 -10 730 184 95 17 chr10 12471571 12471750 -127845015 - L1MB8 LINE L1 -5 6173 5981 2228 81 3 3 chr10 12472182 12472477 -127844288 + AluSg SINE Alu 1 295 -15 2099 112 14 0 chr10 12472671 12472965 -127843800 + AluSx SINE Alu 1 298 -14 395 254 204 11 chr10 12473471 12473652 -127843113 + MER58A DNA MER1_type 1 216 -8 226 232 37 24 chr10 12473721 12473803 -127842962 + L1ME LINE L1 4408 4490 -1656 627 195 85 12 chr10 12473820 12473984 -127842781 - MER5A DNA MER1_type -11 178 3 443 238 44 103 chr10 12473986 12474259 -127842506 + L1ME LINE L1 4493 4749 -1397 1548 206 0 7 chr10 12474261 12474557 -127842208 + AluJo SINE Alu 5 298 -14 474 141 87 0 chr10 12474575 12474667 -127842098 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 289 236 0 0 chr10 12474678 12474750 -127842015 + L1ME LINE L1 5383 5454 -712 243 325 89 8 chr10 12474790 12474913 -127841852 + L1ME LINE L1 5546 5678 -492 662 249 34 28 chr10 12475229 12475406 -127841359 + AluSq SINE Alu 121 298 -15 260 190 203 57 chr10 12475429 12475587 -127841178 - HAL1 LINE L1 -28 2479 2299 854 220 88 58 chr10 12475789 12476152 -127840613 - HAL1 LINE L1 -665 1842 1469 608 196 77 62 chr10 12476157 12476417 -127840348 - L1MC4 LINE L1 -3 8039 7776 2217 117 0 0 chr10 12476428 12476735 -127840030 - AluSx SINE Alu -5 307 1 2181 286 175 24 chr10 12476735 12478030 -127838735 - HAL1 LINE L1 -1015 1492 2 2434 68 0 3 chr10 12478829 12479137 -127837628 + AluY SINE Alu 1 307 -4 1564 129 39 0 chr10 12479254 12479486 -127837279 + AluSx SINE Alu 58 298 -14 863 147 123 0 chr10 12479486 12479649 -127837116 - Charlie3 DNA MER1_type -2527 183 1 1693 168 24 0 chr10 12480122 12480414 -127836351 - AluJo SINE Alu -12 300 2 2166 108 0 0 chr10 12480478 12480797 -127835968 - AluSx SINE Alu 0 312 1 27 100 0 0 chr10 12481832 12481922 -127834843 + GC_rich Low_complexity Low_complexity 1 90 0 1475 87 143 9 chr10 12484650 12484880 -127831885 - AluSg SINE Alu -49 261 1 1511 164 43 4 chr10 12485483 12485763 -127831002 + AluJb SINE Alu 10 300 -12 2157 88 7 0 chr10 12485941 12486236 -127830529 + AluY SINE Alu 2 298 -13 225 94 0 0 chr10 12486464 12486496 -127830269 + (AGGGGG)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr10 12488419 12488446 -127828319 + (TG)n Simple_repeat Simple_repeat 2 28 0 2030 110 10 0 chr10 12488446 12488736 -127828029 - AluSx SINE Alu -19 293 1 2162 50 28 62 chr10 12490005 12490327 -127826438 - AluY SINE Alu 0 311 1 259 262 36 48 chr10 12490386 12490470 -127826295 + MARNA DNA Mariner 268 350 -236 229 188 66 88 chr10 12490987 12491168 -127825597 + (CCAA)n Simple_repeat Simple_repeat 1 177 0 * 250 213 122 30 chr10 12491083 12491247 -127825518 + (CAGC)n Simple_repeat Simple_repeat 1 179 0 287 250 48 6 chr10 12491276 12491444 -127825321 + (CAGAC)n Simple_repeat Simple_repeat 4 178 0 * 328 171 122 37 chr10 12491351 12491515 -127825250 + (CCAA)n Simple_repeat Simple_repeat 1 178 0 202 164 90 30 chr10 12491542 12491609 -127825156 + (CCAA)n Simple_repeat Simple_repeat 3 73 0 359 185 140 13 chr10 12491620 12491777 -127824988 + (CAGC)n Simple_repeat Simple_repeat 1 177 0 295 290 69 8 chr10 12492852 12492983 -127823782 + MER5A DNA MER1_type 1 139 -50 351 336 52 9 chr10 12493065 12493181 -127823584 + L2 LINE L2 3148 3268 -4 287 257 246 38 chr10 12493465 12493753 -127823012 - L2 LINE L2 -28 3244 2897 274 244 165 63 chr10 12493854 12493981 -127822784 - L2 LINE L2 -3 3310 3171 339 259 51 19 chr10 12494250 12494408 -127822357 + (CTATA)n Simple_repeat Simple_repeat 4 166 0 354 237 43 11 chr10 12494985 12495078 -127821687 - MLT1I LTR MaLR 0 409 314 230 294 0 0 chr10 12495379 12495430 -127821335 - L2 LINE L2 -26 3246 3196 2497 226 89 50 chr10 12495553 12496271 -127820494 + MER63C DNA MER1_type 1 762 -298 2182 109 13 7 chr10 12496271 12496575 -127820190 + AluSx SINE Alu 1 306 -6 2497 226 89 50 chr10 12496575 12496743 -127820022 + MER63C DNA MER1_type 762 922 -8 337 301 23 0 chr10 12497160 12497333 -127819432 + G-rich Low_complexity Low_complexity 2 178 0 * 407 294 24 0 chr10 12497276 12497446 -127819319 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 399 278 122 56 chr10 12498345 12498525 -127818240 - MIR SINE MIR -35 227 36 868 153 0 106 chr10 12499694 12499883 -127816882 + AluJb SINE Alu 5 173 -139 1591 237 125 76 chr10 12499896 12500059 -127816706 + L1MC4 LINE L1 6595 6749 -1293 1371 196 94 0 chr10 12500059 12500324 -127816441 + AluJb SINE Alu 1 290 -22 1591 237 125 76 chr10 12500324 12500809 -127815956 + L1MC4 LINE L1 6749 7209 -833 2280 93 0 0 chr10 12500809 12501109 -127815656 + AluY SINE Alu 1 300 -11 1591 237 125 76 chr10 12501109 12501275 -127815490 + L1MC4 LINE L1 7209 7365 -677 2053 123 7 7 chr10 12501275 12501583 -127815182 + AluSx SINE Alu 1 308 -4 1591 237 125 76 chr10 12501583 12501775 -127814990 + L1MC4 LINE L1 7365 7775 -267 429 252 27 0 chr10 12501893 12502004 -127814761 + L1MC4 LINE L1 7778 7891 -151 243 317 12 0 chr10 12502157 12502239 -127814526 - MIR SINE MIR -110 152 70 2210 98 7 0 chr10 12502386 12502681 -127814084 + AluSx SINE Alu 1 297 -15 878 322 38 25 chr10 12504041 12504169 -127812596 - MLT1J LTR MaLR -30 481 356 1594 215 65 0 chr10 12504169 12504494 -127812271 + MER7A DNA MER2_type 1 344 -2 878 322 38 25 chr10 12504494 12504731 -127812034 - MLT1J LTR MaLR -155 356 111 2228 71 0 0 chr10 12504818 12505138 -127811627 - AluY SINE Alu 0 320 1 198 0 0 0 chr10 12505307 12505329 -127811436 + (A)n Simple_repeat Simple_repeat 1 22 0 1782 136 0 4 chr10 12505332 12505604 -127811161 - AluSx SINE Alu -37 275 5 4156 149 63 23 chr10 12507565 12508021 -127808744 - L1PA15 LINE L1 -3 6162 5725 2282 71 7 3 chr10 12508021 12508318 -127808447 - AluY SINE Alu -13 298 1 2043 113 7 3 chr10 12508318 12508609 -127808156 - AluSq SINE Alu -12 301 9 4156 149 63 23 chr10 12508609 12508965 -127807800 - L1PA15 LINE L1 -439 5726 5317 23 0 0 0 chr10 12509150 12509173 -127807592 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 12509444 12509474 -127807291 + AT_rich Low_complexity Low_complexity 1 30 0 412 155 14 0 chr10 12509591 12509662 -127807103 + AluS SINE Alu 6 77 -235 296 67 22 0 chr10 12509792 12509837 -127806928 + AluSp/q SINE Alu 247 292 -11 197 395 42 17 chr10 12511385 12511504 -127805261 - MIR SINE MIR -29 233 112 2150 82 27 10 chr10 12511934 12512226 -127804539 - AluSc SINE Alu -12 297 1 2232 85 10 0 chr10 12512610 12512915 -127803850 + AluSg SINE Alu 1 308 -2 220 154 0 0 chr10 12514122 12514161 -127802604 + MER5A DNA MER1_type 68 106 -83 205 197 28 70 chr10 12514157 12514228 -127802537 - MER5A DNA MER1_type -114 75 8 * 189 277 46 0 chr10 12514262 12514327 -127802438 + L2 LINE L2 2992 3059 -213 234 0 0 0 chr10 12514363 12514389 -127802376 + (CA)n Simple_repeat Simple_repeat 1 26 0 1240 274 125 49 chr10 12515132 12515421 -127801344 + L1MD2 LINE L1 4058 4324 -1822 2115 122 6 6 chr10 12515421 12515732 -127801033 + AluSx SINE Alu 1 311 -1 1240 274 125 49 chr10 12515732 12516027 -127800738 + L1MD2 LINE L1 4324 4595 -1551 2145 104 0 0 chr10 12516027 12516315 -127800450 - AluSx SINE Alu -24 288 1 1240 274 125 49 chr10 12516315 12516688 -127800077 + L1MD2 LINE L1 4595 5089 -1057 285 111 37 0 chr10 12516693 12516747 -127800018 - Alu SINE Alu -2 300 245 1062 101 0 0 chr10 12516854 12517003 -127799762 + AluY SINE Alu 147 295 -16 1428 261 11 13 chr10 12517005 12517377 -127799388 + L1MD2 LINE L1 5320 5690 -669 1286 188 149 4 chr10 12517410 12517671 -127799094 + AluJb SINE Alu 1 299 -3 2095 117 7 0 chr10 12517671 12517969 -127798796 + AluSx SINE Alu 1 300 -12 1252 141 0 0 chr10 12518029 12518214 -127798551 + AluSx SINE Alu 3 187 -125 1034 279 117 31 chr10 12518273 12518893 -127797872 + L1MD2 LINE L1 5662 6344 -15 2387 52 0 43 chr10 12518893 12519217 -127797548 - AluY SINE Alu -1 310 1 1527 186 3 14 chr10 12520823 12521119 -127795646 + AluJb SINE Alu 5 297 -15 408 312 110 9 chr10 12521126 12521344 -127795421 - LTR16A LTR ERVL -148 302 63 261 328 39 23 chr10 12521433 12521561 -127795204 + L2 LINE L2 3173 3302 -11 2017 113 10 3 chr10 12522455 12522756 -127794009 + AluSq SINE Alu 2 304 -9 2317 89 7 0 chr10 12522777 12523081 -127793684 + AluSc SINE Alu 1 306 -3 489 255 94 26 chr10 12523655 12523704 -127793061 - MIR SINE MIR -2 260 216 2508 57 0 7 chr10 12523704 12524003 -127792762 + AluY SINE Alu 1 297 -14 489 255 94 26 chr10 12524003 12524145 -127792620 - MIR SINE MIR -46 216 56 185 283 0 0 chr10 12524956 12525002 -127791763 - MIR SINE MIR -20 242 197 378 244 71 31 chr10 12525039 12525166 -127791599 + L2 LINE L2 3137 3268 -4 2179 128 0 0 chr10 12525213 12525519 -127791246 + AluSx SINE Alu 1 306 -6 2276 68 17 10 chr10 12525586 12525878 -127790887 - AluY SINE Alu -17 294 1 1310 100 58 0 chr10 12526048 12526238 -127790527 + Tigger2a DNA MER2_type 1 201 -233 864 238 6 0 chr10 12526239 12526411 -127790354 - AluJb SINE Alu -2 310 138 927 150 48 0 chr10 12526415 12526582 -127790183 + Tigger2a DNA MER2_type 209 383 -61 2294 99 23 0 chr10 12526583 12526885 -127789880 + AluSq SINE Alu 1 309 -4 2226 112 3 0 chr10 12527322 12527618 -127789147 + AluSx SINE Alu 1 297 -15 197 283 0 0 chr10 12527684 12527730 -127789035 - MIR SINE MIR -20 242 197 402 234 70 31 chr10 12527765 12527893 -127788872 + L2 LINE L2 3136 3268 -4 2069 111 4 0 chr10 12527940 12528251 -127788514 + AluSx SINE Alu 1 312 0 1918 133 24 3 chr10 12528305 12528598 -127788167 + AluSx SINE Alu 6 304 -8 1361 86 56 5 chr10 12528824 12529021 -127787744 + Tigger2a DNA MER2_type 1 207 -227 808 219 7 19 chr10 12529021 12529215 -127787550 - AluJb SINE Alu 0 321 130 1068 166 44 48 chr10 12529215 12529375 -127787390 + Tigger2a DNA MER2_type 207 367 -2341 2211 100 3 0 chr10 12529375 12529666 -127787099 + AluSx SINE Alu 1 292 -20 1068 166 44 48 chr10 12529666 12529734 -127787031 + Tigger2a DNA MER2_type 367 434 0 2415 64 0 0 chr10 12531109 12531404 -127785361 - AluY SINE Alu -16 295 1 248 53 26 0 chr10 12531826 12531864 -127784901 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 228 224 20 0 chr10 12532915 12532964 -127783801 - MER2 DNA MER2_type -28 317 268 1246 173 10 0 chr10 12532996 12533204 -127783561 - MER2 DNA MER2_type -135 210 1 1982 214 29 16 chr10 12533336 12533789 -127782976 + MLT1C LTR MaLR 1 459 -8 1351 158 17 4 chr10 12534312 12534546 -127782219 + AluJo SINE Alu 72 308 -4 212 302 0 0 chr10 12534598 12534651 -127782114 + MER5A DNA MER1_type 13 65 -124 612 86 9 129 chr10 12534667 12534753 -127782012 + U6 snRNA snRNA 1 71 -36 2119 116 0 20 chr10 12534753 12534887 -127781878 + AluSx SINE Alu 5 140 -172 2344 66 31 0 chr10 12534887 12535176 -127781589 + AluSg1 SINE Alu 1 298 -11 2119 116 0 20 chr10 12535176 12535344 -127781421 + AluSx SINE Alu 140 301 -11 612 86 9 129 chr10 12535344 12535373 -127781392 + U6 snRNA snRNA 71 102 -5 23 0 0 0 chr10 12535373 12535396 -127781369 + AT_rich Low_complexity Low_complexity 1 23 0 1982 140 7 7 chr10 12535783 12536075 -127780690 + AluSx SINE Alu 2 293 -19 844 173 49 43 chr10 12536077 12536239 -127780526 - FRAM SINE Alu -2 164 2 2150 98 14 0 chr10 12536317 12536604 -127780161 - AluSq SINE Alu -22 291 1 401 199 59 73 chr10 12536952 12537088 -127779677 - L2 LINE L2 -1 3312 3179 571 319 146 40 chr10 12537267 12538124 -127778641 - L2 LINE L2 -424 2890 1943 525 90 26 0 chr10 12538842 12538920 -127777845 + MADE1 DNA Mariner 1 80 0 1784 119 0 4 chr10 12539588 12539839 -127776926 + AluSx SINE Alu 49 298 -14 2542 46 0 0 chr10 12539914 12540216 -127776549 + AluY SINE Alu 1 302 -9 21 0 0 0 chr10 12540332 12540353 -127776412 + AT_rich Low_complexity Low_complexity 1 21 0 2221 87 10 0 chr10 12540355 12540644 -127776121 + AluSx SINE Alu 1 292 -20 1582 172 0 15 chr10 12540893 12541155 -127775610 + AluJo SINE Alu 52 309 -3 704 266 155 4 chr10 12541741 12541967 -127774798 + MIR SINE MIR 2 261 -1 1634 157 41 31 chr10 12541982 12542275 -127774490 + AluJo SINE Alu 1 296 -16 332 247 14 0 chr10 12542618 12542691 -127774074 + Tigger3(Golem) DNA MER2_type 1 74 -2955 921 150 14 0 chr10 12542693 12542833 -127773932 + Tigger3(Golem) DNA MER2_type 2887 3028 -1 2262 88 0 10 chr10 12543356 12543652 -127773113 + AluSc SINE Alu 1 293 -16 30 59 0 0 chr10 12544939 12544990 -127771775 + AT_rich Low_complexity Low_complexity 1 51 0 2405 99 0 0 chr10 12546071 12546375 -127770390 - AluSg SINE Alu -6 304 1 506 254 114 75 chr10 12546594 12546874 -127769891 + L2 LINE L2 3020 3310 -3 537 235 43 25 chr10 12546935 12547097 -127769668 - MER104 DNA Tc2 -13 167 3 261 274 147 11 chr10 12547128 12547223 -127769542 + L2 LINE L2 3118 3225 -88 2363 62 17 0 chr10 12547325 12547616 -127769149 - AluSp SINE Alu -17 296 1 2170 151 0 0 chr10 12547846 12548158 -127768607 + AluSx SINE Alu 1 312 0 4737 62 0 2 chr10 12548447 12549010 -127767755 - L1PA5 LINE L1 0 6154 5593 1991 114 4 0 chr10 12549110 12549382 -127767383 - AluSq SINE Alu -40 273 1 808 137 73 0 chr10 12549563 12549687 -127767078 - AluJb SINE Alu -51 261 129 1898 146 0 49 chr10 12549692 12549881 -127766884 - AluSp SINE Alu 0 313 145 2258 104 3 7 chr10 12549881 12550190 -127766575 - AluY SINE Alu -1 310 3 1898 146 0 49 chr10 12550190 12550329 -127766436 - AluSp SINE Alu -168 145 1 417 204 142 9 chr10 12550474 12550587 -127766178 - MIR SINE MIR 0 262 135 338 86 0 17 chr10 12550602 12550660 -127766105 - AluSp/q SINE Alu -1 302 246 2238 95 3 3 chr10 12550760 12551055 -127765710 + AluSg SINE Alu 1 295 -15 2071 130 7 3 chr10 12551723 12552022 -127764743 - AluSx SINE Alu -12 300 1 2254 89 0 13 chr10 12552028 12552330 -127764435 - AluSg SINE Alu -12 298 1 684 215 185 10 chr10 12552586 12552791 -127763974 + MIR SINE MIR 22 262 0 292 309 95 32 chr10 12552902 12553028 -127763737 + MIR SINE MIR 20 153 -109 232 194 45 15 chr10 12553079 12553146 -127763619 + L1ME4a LINE L1 5791 5859 -262 249 252 126 8 chr10 12553214 12553341 -127763424 + L1ME4a LINE L1 5963 6104 -17 2108 126 0 7 chr10 12553390 12553704 -127763061 + AluSx SINE Alu 1 312 0 26 0 0 0 chr10 12553745 12553771 -127762994 + AT_rich Low_complexity Low_complexity 1 26 0 334 73 16 0 chr10 12554090 12554143 -127762622 + Alu SINE Alu 247 290 -12 1860 133 16 35 chr10 12556624 12556941 -127759824 - AluY SINE Alu 0 311 1 1604 129 112 24 chr10 12557280 12557567 -127759198 + AluSx SINE Alu 1 312 0 395 268 29 36 chr10 12557667 12557805 -127758960 - MIR SINE MIR -21 241 105 27 73 0 0 chr10 12557892 12557947 -127758818 + AT_rich Low_complexity Low_complexity 1 55 0 2259 91 0 17 chr10 12558055 12558352 -127758413 - AluSg SINE Alu -18 292 1 410 278 161 85 chr10 12558734 12559004 -127757761 + L2 LINE L2 2819 3140 -173 2007 119 25 3 chr10 12559004 12559289 -127757476 - AluSp SINE Alu -22 291 1 410 278 161 85 chr10 12559289 12559478 -127757287 + L2 LINE L2 3140 3313 0 265 280 34 119 chr10 12559599 12559751 -127757014 - L1 LINE L1 -2216 3930 3809 2310 93 0 0 chr10 12559751 12560040 -127756725 - AluY SINE Alu -22 289 1 265 280 34 119 chr10 12560040 12560155 -127756610 - L1 LINE L1 -2337 3809 3686 2235 80 10 0 chr10 12560298 12560586 -127756179 - AluSp SINE Alu -19 294 4 21 0 0 0 chr10 12561084 12561105 -127755660 + AT_rich Low_complexity Low_complexity 1 21 0 2120 98 0 0 chr10 12561105 12561381 -127755384 - AluSx SINE Alu -36 276 1 2069 104 16 35 chr10 12561856 12562172 -127754593 - AluY SINE Alu -1 310 1 224 328 148 16 chr10 12562172 12562289 -127754476 + MIR SINE MIR 96 228 -34 2405 78 0 10 chr10 12562512 12562818 -127753947 - AluSq SINE Alu -10 303 1 746 293 170 24 chr10 12563291 12563797 -127752968 + L2 LINE L2 2079 2658 -656 536 314 174 19 chr10 12563850 12564223 -127752542 + L2 LINE L2 2883 3313 0 710 277 44 8 chr10 12564512 12564761 -127752004 + L2 LINE L2 1643 1900 -1414 2166 108 7 0 chr10 12565094 12565391 -127751374 + AluSx SINE Alu 1 299 -13 482 234 8 0 chr10 12566681 12566792 -127749973 - MIR SINE MIR -63 145 38 189 94 0 0 chr10 12566992 12567024 -127749741 + (A)n Simple_repeat Simple_repeat 1 32 0 1977 124 10 17 chr10 12567221 12567511 -127749254 + AluSx SINE Alu 6 293 -19 22 35 0 0 chr10 12567560 12567589 -127749176 + AT_rich Low_complexity Low_complexity 1 29 0 581 210 216 6 chr10 12567973 12568149 -127748616 + MIR SINE MIR 37 249 -13 787 133 0 42 chr10 12569827 12569947 -127746818 - FLAM_A SINE Alu -14 128 14 1779 149 11 0 chr10 12570014 12570283 -127746482 + AluSx SINE Alu 14 285 -27 240 276 40 0 chr10 12570316 12570392 -127746373 - MER116 DNA Mariner -1 79 1 1833 163 0 16 chr10 12570585 12570891 -127745874 + AluJo SINE Alu 5 305 -7 2320 115 0 0 chr10 12571047 12571352 -127745413 + AluSx SINE Alu 1 305 -7 247 317 0 0 chr10 12571449 12571553 -127745212 + CT-rich Low_complexity Low_complexity 3 106 0 286 315 0 0 chr10 12572609 12572682 -127744083 - MIR3 SINE MIR -4 204 132 288 245 85 64 chr10 12572812 12573000 -127743765 + L1ME4a LINE L1 5706 5897 -224 21 71 0 0 chr10 12573130 12573172 -127743593 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 0 chr10 12574005 12574314 -127742451 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 12575246 12575267 -127741498 + AT_rich Low_complexity Low_complexity 1 21 0 2452 76 0 0 chr10 12575421 12575725 -127741040 - AluY SINE Alu -7 304 1 189 318 0 0 chr10 12575977 12576021 -127740744 - L2 LINE L2 -10 3262 3219 413 254 197 0 chr10 12576208 12576330 -127740435 + MER5A DNA MER1_type 44 189 0 2110 123 0 3 chr10 12577302 12577595 -127739170 + AluSx SINE Alu 1 292 -20 249 33 0 0 chr10 12577595 12577625 -127739140 + (TA)n Simple_repeat Simple_repeat 2 31 0 845 148 0 22 chr10 12577645 12577780 -127738985 + FLAM_C SINE Alu 1 132 -1 2113 120 3 16 chr10 12578812 12579121 -127737644 + AluSx SINE Alu 1 305 -7 1027 216 0 0 chr10 12579791 12579976 -127736789 - AluJb SINE Alu -31 281 97 1882 133 4 7 chr10 12580076 12580347 -127736418 - AluSx SINE Alu -37 275 6 469 220 76 30 chr10 12580471 12580603 -127736162 + MIR SINE MIR 118 255 -7 879 99 0 25 chr10 12580603 12580724 -127736041 + FLAM_C SINE Alu 1 118 -25 1994 137 13 7 chr10 12582013 12582312 -127734453 + AluJb SINE Alu 1 301 -11 666 180 25 0 chr10 12582572 12582694 -127734071 - MER20 DNA MER1_type 0 219 95 1626 194 43 3 chr10 12582801 12582921 -127733844 + AluJo SINE Alu 2 116 -196 285 29 0 0 chr10 12582921 12582955 -127733810 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1626 194 43 3 chr10 12582955 12583133 -127733632 + AluJo SINE Alu 116 312 0 897 162 10 76 chr10 12583141 12583338 -127733427 + FRAM SINE Alu 1 176 0 1988 157 7 0 chr10 12583345 12583644 -127733121 + AluJo SINE Alu 1 301 -11 547 319 93 42 chr10 12583644 12584073 -127732692 - L2 LINE L2 -21 3292 2842 339 299 103 0 chr10 12584191 12584298 -127732467 + L2 LINE L2 3196 3313 0 416 365 47 45 chr10 12584874 12585340 -127731425 + L2 LINE L2 2378 2844 -470 268 366 108 0 chr10 12585536 12585629 -127731136 + L2 LINE L2 3121 3223 -49 252 0 0 0 chr10 12585863 12585891 -127730874 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 1216 171 155 4 chr10 12585891 12586136 -127730629 - AluJo SINE Alu -30 282 1 26 0 0 0 chr10 12586136 12586162 -127730603 + AT_rich Low_complexity Low_complexity 1 26 0 1020 134 6 28 chr10 12587311 12587490 -127729275 - Tigger4(Zombi) DNA MER2_type 0 2731 2557 320 267 10 0 chr10 12587590 12587691 -127729074 - L1ME LINE L1 -403 5718 5617 2356 84 0 0 chr10 12587926 12588225 -127728540 - AluY SINE Alu -12 299 1 391 192 0 40 chr10 12588228 12588327 -127728438 - MER103 DNA DNA -70 96 2 816 258 105 12 chr10 12588517 12588888 -127727877 - L1MEc LINE L1 -3348 2867 2455 2391 93 3 0 chr10 12588888 12589190 -127727575 - AluSp SINE Alu -10 303 1 816 258 105 12 chr10 12589190 12589218 -127727547 - L1MEc LINE L1 -3760 2455 2431 233 216 57 0 chr10 12589430 12589518 -127727247 - L1MEc LINE L1 -3819 2396 2304 350 309 23 34 chr10 12589569 12589744 -127727021 - L1MEc LINE L1 -4107 2289 2117 1767 80 8 21 chr10 12590013 12590250 -127726515 - AluSq SINE Alu -8 305 72 10496 53 6 0 chr10 12590350 12591735 -127725030 - L1P LINE L1 -993 5153 3761 261 228 72 33 chr10 12591837 12592017 -127724748 + Charlie7 DNA MER1_type 2420 2606 -6 1000 177 0 12 chr10 12592079 12592243 -127724522 + FRAM SINE Alu 1 161 -15 242 231 70 70 chr10 12592279 12592435 -127724330 - L1ME4a LINE L1 -39 6082 5927 2216 90 3 29 chr10 12592472 12592782 -127723983 - AluSp SINE Alu -11 302 1 24 0 0 0 chr10 12593774 12593798 -127722967 + AT_rich Low_complexity Low_complexity 1 24 0 456 330 17 23 chr10 12593798 12593971 -127722794 - MIR SINE MIR -30 232 61 339 238 25 49 chr10 12594733 12594855 -127721910 - MER103 DNA DNA -45 121 3 877 92 0 0 chr10 12596590 12596699 -127720066 + AluY SINE Alu 1 109 -202 1885 32 0 0 chr10 12596799 12597018 -127719747 - AluY SINE Alu -92 219 1 294 179 45 0 chr10 12597940 12598007 -127718758 + L1ME3 LINE L1 6016 6085 -77 984 122 0 13 chr10 12598023 12598179 -127718586 + L1PA11 LINE L1 6021 6174 0 2227 124 0 13 chr10 12598310 12598624 -127718141 + AluSx SINE Alu 1 310 -2 1096 189 26 4 chr10 12598745 12599016 -127717749 + L1M4 LINE L1 5141 5417 -743 402 117 0 93 chr10 12599017 12599140 -127717625 + MER2 DNA MER2_type 3 206 -139 1456 186 45 4 chr10 12599160 12599424 -127717341 - AluJo SINE Alu -22 290 16 799 181 0 0 chr10 12600172 12600299 -127716466 + FLAM_A SINE Alu 1 127 -6 2023 77 23 0 chr10 12601276 12601535 -127715230 + AluY SINE Alu 39 303 -8 2315 98 0 7 chr10 12601541 12601846 -127714919 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 12601931 12601955 -127714810 + AT_rich Low_complexity Low_complexity 1 24 0 394 296 60 72 chr10 12602181 12602698 -127714067 + HAL1b LINE L1 119 629 -719 2230 98 10 0 chr10 12602698 12602995 -127713770 + AluSq SINE Alu 1 300 -13 486 308 28 79 chr10 12603506 12603700 -127713065 + L1 LINE L1 2153 2322 -3824 2127 133 0 7 chr10 12603700 12604008 -127712757 + AluSx SINE Alu 1 306 -6 486 308 28 79 chr10 12604008 12604167 -127712598 + L1 LINE L1 2322 2488 -3658 1602 183 0 51 chr10 12604525 12604836 -127711929 + AluJo SINE Alu 1 295 -17 359 198 124 104 chr10 12604882 12605084 -127711681 + L1 LINE L1 3074 3279 -2867 348 257 47 61 chr10 12605437 12605537 -127711228 - L2 LINE L2 -4 3309 3210 2566 66 0 0 chr10 12605537 12605839 -127710926 + AluY SINE Alu 9 310 -1 348 257 47 61 chr10 12605839 12605886 -127710879 - L2 LINE L2 -103 3210 3164 291 256 139 0 chr10 12606223 12606309 -127710456 - L2 LINE L2 -29 3284 3187 2140 95 3 0 chr10 12606342 12606625 -127710140 + AluSg SINE Alu 6 289 -21 653 299 53 77 chr10 12606645 12607020 -127709745 + L2 LINE L2 2907 3272 0 2093 114 14 0 chr10 12607188 12607478 -127709287 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 12607825 12607846 -127708919 + AT_rich Low_complexity Low_complexity 1 21 0 673 173 141 63 chr10 12608939 12609194 -127707571 + LTR48 LTR ERV1 1 275 -512 262 169 15 62 chr10 12609373 12609438 -127707327 - FRAM/FAM SINE Alu -90 76 15 2310 84 0 7 chr10 12609478 12609777 -127706988 + AluY SINE Alu 5 301 -10 1224 114 6 0 chr10 12609778 12609944 -127706821 + AluSg/x SINE Alu 131 297 -13 758 233 66 86 chr10 12609947 12610135 -127706630 - Charlie1a DNA MER1_type -2462 299 118 2283 103 3 7 chr10 12610135 12610437 -127706328 + AluSg SINE Alu 1 301 -9 758 233 66 86 chr10 12610437 12610549 -127706216 - Charlie1a DNA MER1_type -2643 118 5 226 204 0 80 chr10 12611189 12611277 -127705488 + MLT1K LTR MaLR 11 91 -497 1611 185 49 0 chr10 12611401 12611525 -127705240 + AluJo SINE Alu 1 117 -195 309 51 0 0 chr10 12611525 12611564 -127705201 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 1611 185 49 0 chr10 12611564 12611726 -127705039 + AluJo SINE Alu 117 301 -11 2310 105 3 0 chr10 12612036 12612341 -127704424 + AluSq SINE Alu 1 306 -7 2143 117 0 0 chr10 12612892 12613182 -127703583 + AluSq SINE Alu 1 290 -23 230 313 16 0 chr10 12613331 12613395 -127703370 - MIR SINE MIR -160 102 38 267 288 0 0 chr10 12613405 12613471 -127703294 - L2 LINE L2 0 3313 3248 419 242 87 27 chr10 12613508 12613657 -127703108 - L2 LINE L2 -42 3271 3114 1760 170 0 53 chr10 12613670 12613988 -127702777 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr10 12613988 12614011 -127702754 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr10 12614127 12614154 -127702611 + AT_rich Low_complexity Low_complexity 1 27 0 653 75 64 0 chr10 12614263 12614357 -127702408 + MER30 DNA MER1_type 1 100 -130 1912 152 0 25 chr10 12614384 12614700 -127702065 - AluSx SINE Alu 0 312 5 1241 119 0 6 chr10 12615339 12615515 -127701250 + AluJb SINE Alu 3 177 -135 703 257 55 31 chr10 12615515 12615807 -127700958 - LTR21A LTR ERV1 -19 486 188 935 92 54 0 chr10 12615928 12616058 -127700707 + AluJb SINE Alu 172 308 -4 319 276 31 55 chr10 12616595 12616722 -127700043 + L1MC5 LINE L1 7813 7936 -25 469 241 36 9 chr10 12616944 12617056 -127699709 - L2 LINE L2 -5 3308 3194 234 331 204 25 chr10 12617237 12617486 -127699279 - L2 LINE L2 -337 2977 2774 2139 125 13 3 chr10 12617486 12617790 -127698975 + AluSq SINE Alu 1 307 -6 234 331 204 25 chr10 12617790 12617893 -127698872 - L2 LINE L2 -540 2774 2562 21 0 0 0 chr10 12618287 12618308 -127698457 + AT_rich Low_complexity Low_complexity 1 21 0 1424 131 63 4 chr10 12619100 12619352 -127697413 - LTR24B LTR ERV1 -4 572 306 428 96 0 27 chr10 12619366 12619422 -127697343 - LTR24B LTR ERV1 -503 73 17 2152 122 0 7 chr10 12619422 12619717 -127697048 - AluSx SINE Alu -18 294 2 1963 162 0 10 chr10 12619718 12620027 -127696738 - AluJo SINE Alu -6 306 1 428 96 0 27 chr10 12620027 12620041 -127696724 - LTR24B LTR ERV1 -558 18 3 599 179 31 162 chr10 12620573 12620802 -127695963 + MER21B LTR ERV1 17 215 -648 * 761 171 66 7 chr10 12620801 12620953 -127695812 + MLT1A1 LTR MaLR 205 365 0 2122 102 0 3 chr10 12621404 12621727 -127695038 + AluY SINE Alu 1 322 0 1741 132 35 0 chr10 12621747 12622005 -127694760 - AluSx SINE Alu -13 299 33 494 273 54 57 chr10 12622168 12622204 -127694561 + L1ME LINE L1 5491 5526 -595 2305 114 0 0 chr10 12622204 12622511 -127694254 + AluY SINE Alu 1 307 -4 494 273 54 57 chr10 12622511 12622545 -127694220 + L1ME LINE L1 5526 5559 -562 3264 71 5 0 chr10 12622545 12622965 -127693800 - L1PA8 LINE L1 -14 6158 5737 494 273 54 57 chr10 12622965 12623227 -127693538 + L1ME LINE L1 5559 5823 -298 2644 238 91 62 chr10 12623362 12624845 -127691920 + L1MEc LINE L1 87 1615 -4781 1586 157 17 50 chr10 12624845 12625145 -127691620 - AluJo SINE Alu -22 290 1 2644 238 91 62 chr10 12625145 12625171 -127691594 + L1MEc LINE L1 1615 1639 -4757 1719 150 4 11 chr10 12625172 12625432 -127691333 + AluSx SINE Alu 1 258 -54 2352 78 4 0 chr10 12625523 12625824 -127690941 + AluSp SINE Alu 5 306 0 1825 107 31 24 chr10 12625932 12626222 -127690543 - AluSg SINE Alu -18 292 1 2337 94 7 0 chr10 12626592 12626889 -127689876 + AluSg SINE Alu 1 299 -11 2221 114 10 0 chr10 12626919 12627217 -127689548 + AluSx SINE Alu 1 301 -11 1366 49 0 0 chr10 12627921 12628085 -127688680 - L1PA7 LINE L1 0 6154 5991 183 42 0 0 chr10 12628090 12628114 -127688651 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1801 170 0 10 chr10 12628344 12628479 -127688286 + AluJb SINE Alu 1 136 -172 2220 129 0 0 chr10 12628479 12628781 -127687984 + AluSg SINE Alu 1 302 -8 1801 170 0 10 chr10 12628781 12628956 -127687809 + AluJb SINE Alu 136 308 0 1602 218 27 0 chr10 12629331 12629662 -127687103 - MER58B DNA MER1_type -1 340 1 21 0 0 0 chr10 12629798 12629819 -127686946 + AT_rich Low_complexity Low_complexity 1 21 0 2139 126 0 3 chr10 12629900 12630201 -127686564 - AluSx SINE Alu -10 302 3 24 32 0 0 chr10 12630208 12630239 -127686526 + AT_rich Low_complexity Low_complexity 1 31 0 2078 65 8 8 chr10 12630424 12630685 -127686080 - AluSp SINE Alu -8 305 45 826 234 96 25 chr10 12630805 12631044 -127685721 - MIR SINE MIR -5 257 2 188 331 137 0 chr10 12631302 12631426 -127685339 + MIR SINE MIR 60 200 -62 1566 160 60 32 chr10 12631426 12631708 -127685057 + AluJo SINE Alu 1 290 -22 2083 103 22 0 chr10 12632042 12632313 -127684452 + AluSx SINE Alu 1 277 -35 2061 118 7 3 chr10 12632314 12632611 -127684154 + AluSx SINE Alu 7 304 -8 25 0 0 0 chr10 12633497 12633522 -127683243 + AT_rich Low_complexity Low_complexity 1 25 0 2038 107 0 58 chr10 12633571 12633881 -127682884 + AluSc SINE Alu 1 292 -17 1730 167 13 7 chr10 12633887 12634192 -127682573 + AluJb SINE Alu 1 307 -5 696 189 24 0 chr10 12634359 12634486 -127682279 + AluJo SINE Alu 6 135 -177 2152 116 0 0 chr10 12634510 12634794 -127681971 + AluSx SINE Alu 5 288 -24 25 0 0 0 chr10 12634794 12634819 -127681946 + AT_rich Low_complexity Low_complexity 1 25 0 1765 171 10 7 chr10 12634831 12635136 -127681629 + AluJo SINE Alu 3 308 -4 2005 136 7 0 chr10 12635447 12635761 -127681004 + AluSx SINE Alu 1 316 0 702 327 44 29 chr10 12635816 12635981 -127680784 + L3 LINE CR1 559 720 -857 2118 127 3 0 chr10 12635981 12636272 -127680493 - AluJb SINE Alu -20 292 1 702 327 44 29 chr10 12636272 12636562 -127680203 + L3 LINE CR1 720 1021 -556 349 235 134 0 chr10 12636569 12636688 -127680077 + L3 LINE CR1 1146 1280 -297 197 244 0 0 chr10 12636716 12636757 -127680008 - MER5C DNA MER1_type -2 322 282 2308 108 0 7 chr10 12636825 12637131 -127679634 - AluSq SINE Alu -9 304 1 268 232 37 12 chr10 12637134 12637216 -127679549 - MER5C DNA MER1_type -204 120 37 271 347 68 32 chr10 12637247 12637498 -127679267 + L3 LINE CR1 1308 1567 -10 294 123 0 35 chr10 12638533 12638590 -127678175 - Alu SINE Alu -247 55 1 347 137 68 14 chr10 12638592 12638665 -127678100 - Alu SINE Alu -5 296 220 820 174 149 6 chr10 12638667 12638693 -127678072 + AluJo SINE Alu 85 106 -206 2305 89 0 10 chr10 12638693 12638996 -127677769 + AluY SINE Alu 8 307 -4 820 174 149 6 chr10 12638996 12639130 -127677635 + AluJo SINE Alu 106 268 -44 264 30 0 0 chr10 12639138 12639171 -127677594 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 219 200 80 0 chr10 12639409 12639459 -127677306 + MIR SINE MIR 209 262 0 1689 132 8 0 chr10 12639751 12639994 -127676771 + AluSx SINE Alu 54 298 -14 1942 153 7 0 chr10 12640011 12640306 -127676459 + AluSx SINE Alu 1 297 -15 2421 96 3 0 chr10 12640308 12640611 -127676154 + AluSp SINE Alu 1 304 -9 327 98 0 0 chr10 12640816 12640923 -127675842 - Alu SINE Alu 0 347 241 23 33 0 0 chr10 12641140 12641170 -127675595 + AT_rich Low_complexity Low_complexity 1 30 0 2335 95 7 0 chr10 12641203 12641498 -127675267 - AluSg SINE Alu -13 297 1 810 156 0 16 chr10 12641697 12641825 -127674940 - FLAM_C SINE Alu -7 126 1 2179 106 0 3 chr10 12643345 12643651 -127673114 + AluSx SINE Alu 1 305 0 21 0 0 0 chr10 12643796 12643817 -127672948 + AT_rich Low_complexity Low_complexity 1 21 0 289 74 0 56 chr10 12644150 12644204 -127672561 - AluJo SINE Alu -166 136 86 2174 126 13 0 chr10 12646396 12646698 -127670067 + AluSx SINE Alu 1 306 -6 1846 101 23 23 chr10 12647002 12647284 -127669481 + AluSx SINE Alu 29 310 0 2146 90 3 10 chr10 12647319 12647609 -127669156 + AluSc SINE Alu 1 288 -21 2350 77 10 0 chr10 12647609 12647909 -127668856 + AluY SINE Alu 1 303 -8 1533 147 48 8 chr10 12648242 12648493 -127668272 + AluJo SINE Alu 27 287 -25 2524 80 0 10 chr10 12648725 12649039 -127667726 + AluSp SINE Alu 1 311 -2 300 115 115 64 chr10 12649156 12649234 -127667531 + L1MC5 LINE L1 7834 7915 -46 1589 142 0 0 chr10 12649235 12649467 -127667298 + AluJo SINE Alu 67 298 -14 708 170 44 7 chr10 12649564 12649699 -127667066 + FAM SINE Alu 1 140 -45 515 273 0 0 chr10 12649836 12649957 -127666808 + FLAM_A SINE Alu 1 121 -12 1622 164 12 0 chr10 12649967 12650223 -127666542 + AluJb SINE Alu 1 259 -53 287 243 136 21 chr10 12650229 12650369 -127666396 - MIR SINE MIR -14 248 93 31 58 0 0 chr10 12650371 12650423 -127666342 + AT_rich Low_complexity Low_complexity 1 52 0 457 250 145 30 chr10 12650789 12650989 -127665776 + MIR SINE MIR 32 254 -8 1207 153 0 0 chr10 12651050 12651233 -127665532 - AluSg/x SINE Alu 0 312 130 2135 107 3 7 chr10 12651262 12651562 -127665203 + AluSx SINE Alu 1 299 -13 180 250 0 0 chr10 12651853 12651917 -127664848 + CT-rich Low_complexity Low_complexity 4 67 0 477 219 17 17 chr10 12652380 12652499 -127664266 - L1MC5 LINE L1 -14 7947 7829 731 243 24 44 chr10 12652892 12653098 -127663667 - MER20 DNA MER1_type 0 219 18 1017 157 51 0 chr10 12653109 12653287 -127663478 - MER3 DNA MER1_type -22 187 1 2199 128 3 0 chr10 12653484 12653782 -127662983 + AluSp SINE Alu 1 299 -14 1801 166 10 3 chr10 12653826 12654116 -127662649 - AluJb SINE Alu -13 299 8 1991 143 33 0 chr10 12654132 12654433 -127662332 - AluSx SINE Alu -1 311 1 2159 101 11 0 chr10 12654842 12655120 -127661645 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr10 12655120 12655162 -127661603 + (CA)n Simple_repeat Simple_repeat 1 42 0 2177 110 3 0 chr10 12655188 12655487 -127661278 + AluSq SINE Alu 1 300 -13 28 29 0 0 chr10 12655537 12655572 -127661193 + AT_rich Low_complexity Low_complexity 1 35 0 701 158 0 33 chr10 12655586 12655706 -127661059 - FLAM_C SINE Alu -15 118 3 587 236 93 6 chr10 12655844 12656005 -127660760 - MIR SINE MIR -39 223 49 2271 91 7 3 chr10 12656364 12656661 -127660104 - AluSx SINE Alu -13 299 2 2358 91 0 10 chr10 12656880 12657189 -127659576 + AluSc SINE Alu 1 306 -3 253 345 84 14 chr10 12657407 12657549 -127659216 + MIR SINE MIR 25 176 -86 25 0 0 0 chr10 12660929 12660954 -127655811 + AT_rich Low_complexity Low_complexity 1 25 0 2419 66 0 7 chr10 12661003 12661304 -127655461 + AluY SINE Alu 1 299 -12 2231 104 3 10 chr10 12661447 12661756 -127655009 + AluSx SINE Alu 6 312 0 2318 83 13 0 chr10 12662752 12663054 -127653711 + AluSq SINE Alu 1 306 -7 2170 99 7 0 chr10 12663281 12663592 -127653173 + AluSq SINE Alu 1 313 0 212 279 33 0 chr10 12663592 12663653 -127653112 + MIR SINE MIR 188 250 -12 916 281 145 24 chr10 12663856 12663975 -127652790 - L2 LINE L2 -997 2317 2214 2283 109 0 0 chr10 12663975 12664278 -127652487 + AluSq SINE Alu 1 303 -10 916 281 145 24 chr10 12664278 12664709 -127652056 - L2 LINE L2 -1100 2214 1700 1805 144 10 22 chr10 12664773 12664951 -127651814 - AluSx SINE Alu -3 309 135 1979 137 3 7 chr10 12664951 12665251 -127651514 - AluSx SINE Alu -13 299 1 1805 144 10 22 chr10 12665251 12665385 -127651380 - AluSx SINE Alu -177 135 1 460 287 65 19 chr10 12665391 12665607 -127651158 - L2 LINE L2 -1884 1430 1205 2030 96 26 33 chr10 12665607 12665749 -127651016 + AluSx SINE Alu 1 142 -170 2019 134 7 3 chr10 12665749 12666041 -127650724 + AluSx SINE Alu 4 296 -16 2030 96 26 33 chr10 12666041 12666200 -127650565 + AluSx SINE Alu 142 300 -12 487 114 0 0 chr10 12666500 12666570 -127650195 + AluSg/x SINE Alu 198 267 -45 1727 91 8 25 chr10 12666570 12666811 -127649954 - AluSg SINE Alu -73 237 1 2590 64 0 3 chr10 12666823 12667135 -127649630 - AluY SINE Alu 0 311 1 2048 126 11 0 chr10 12667202 12667488 -127649277 - AluSx SINE Alu -23 289 1 2275 112 0 3 chr10 12668165 12668468 -127648297 - AluSx SINE Alu -10 302 1 2183 118 0 0 chr10 12669038 12669325 -127647440 - AluSx SINE Alu -25 287 1 2238 106 0 3 chr10 12669564 12669866 -127646899 - AluSx SINE Alu -11 301 1 2449 68 0 16 chr10 12670171 12670482 -127646283 + AluY SINE Alu 5 310 -1 1810 135 10 30 chr10 12670666 12670963 -127645802 + MER47A DNA MER2_type 1 291 -75 1156 105 58 0 chr10 12670963 12671154 -127645611 - L1PA11 LINE L1 -1 6173 5972 2238 76 4 0 chr10 12671160 12671436 -127645329 - AluY SINE Alu -3 308 32 280 294 103 8 chr10 12671600 12671726 -127645039 + MIR SINE MIR 78 215 -47 1732 145 7 38 chr10 12671885 12672175 -127644590 + AluJb SINE Alu 1 281 -31 2017 129 3 3 chr10 12672185 12672496 -127644269 - AluY SINE Alu 0 311 1 754 171 0 0 chr10 12672699 12672822 -127643943 - AluSg/x SINE Alu -17 295 173 1474 82 0 0 chr10 12672923 12673105 -127643660 - AluY SINE Alu -129 182 1 2502 69 0 3 chr10 12673448 12673751 -127643014 + AluY SINE Alu 1 302 -9 2136 113 0 0 chr10 12673942 12674275 -127642490 + AluSx SINE Alu 1 333 0 732 174 0 0 chr10 12674509 12674624 -127642141 - FLAM_A SINE Alu -17 116 2 2188 91 7 0 chr10 12674692 12674979 -127641786 - AluY SINE Alu -21 290 2 264 75 0 0 chr10 12675213 12675253 -127641512 - Alu SINE Alu -1 298 259 227 208 0 0 chr10 12675264 12675312 -127641453 + A-rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr10 12675431 12675458 -127641307 + AT_rich Low_complexity Low_complexity 1 27 0 822 124 41 0 chr10 12675517 12675638 -127641127 + AluJo SINE Alu 12 137 -175 1095 62 0 0 chr10 12675640 12675768 -127640997 + AluY SINE Alu 5 132 -179 1163 139 6 0 chr10 12675823 12675996 -127640769 + AluSg/x SINE Alu 127 300 -12 1380 132 71 5 chr10 12676046 12676258 -127640507 - AluSg/x SINE Alu -11 299 74 1240 138 14 9 chr10 12676984 12677202 -127639563 + AluSp SINE Alu 86 304 -9 184 315 182 14 chr10 12677234 12677377 -127639388 - MIR SINE MIR -93 169 3 * 215 254 60 0 chr10 12677377 12677435 -127639330 + L2 LINE L2 2071 2132 -1182 1953 124 3 7 chr10 12677484 12677783 -127638982 - AluSx SINE Alu -14 298 1 2097 120 7 0 chr10 12677786 12678086 -127638679 - AluSg SINE Alu -8 302 1 242 116 14 43 chr10 12678086 12678155 -127638610 + (TC)n Simple_repeat Simple_repeat 2 68 0 1276 225 93 25 chr10 12678157 12678522 -127638243 + MLT1F1 LTR MaLR 177 566 -1 1908 157 0 0 chr10 12678553 12678852 -127637913 + AluJo SINE Alu 1 299 -13 696 206 22 22 chr10 12679011 12679147 -127637618 - AluJo SINE Alu -176 136 1 1996 122 0 7 chr10 12679163 12679467 -127637298 - AluSx SINE Alu 0 312 11 1241 269 219 21 chr10 12679808 12679912 -127636853 - L2 LINE L2 -1691 1623 1541 2261 99 0 6 chr10 12679912 12680224 -127636541 + AluSq SINE Alu 1 310 -3 1241 269 219 21 chr10 12680224 12680799 -127635966 - L2 LINE L2 -1773 1541 809 852 230 61 90 chr10 12680850 12681140 -127635625 + L1MC4a LINE L1 5458 5736 -2072 2320 68 3 10 chr10 12681140 12681448 -127635317 + AluY SINE Alu 1 306 -5 852 230 61 90 chr10 12681448 12681536 -127635229 + L1MC4a LINE L1 5736 5825 -1983 1146 167 0 10 chr10 12681539 12681731 -127635034 + AluJo SINE Alu 1 190 -122 909 161 12 0 chr10 12682718 12682879 -127633886 + AluSq SINE Alu 135 297 -16 1823 104 49 36 chr10 12682914 12683221 -127633544 - AluSq SINE Alu -2 311 1 365 345 10 24 chr10 12683239 12683448 -127633317 - L2 LINE L2 -2164 1150 945 1934 101 27 20 chr10 12683467 12683605 -127633160 + AluSx SINE Alu 1 137 -175 1929 130 7 3 chr10 12683605 12683898 -127632867 + AluSx SINE Alu 4 297 -15 1934 101 27 20 chr10 12683898 12684056 -127632709 + AluSx SINE Alu 137 299 -13 604 312 42 17 chr10 12684211 12684448 -127632317 + MIR SINE MIR 20 262 0 1642 137 59 4 chr10 12684634 12684931 -127631834 + AluSq SINE Alu 1 312 0 210 345 175 26 chr10 12685045 12685239 -127631526 + L2 LINE L2 2755 2977 -337 2209 77 25 0 chr10 12685420 12685706 -127631059 + AluSg SINE Alu 1 293 -17 2461 55 3 3 chr10 12685909 12686220 -127630545 + AluY SINE Alu 1 311 0 1700 147 0 38 chr10 12686229 12686521 -127630244 - AluJb SINE Alu -31 281 1 347 303 200 6 chr10 12686680 12686845 -127629920 - MIR SINE MIR -47 215 19 2154 79 0 0 chr10 12686970 12687250 -127629515 + AluY SINE Alu 32 311 0 194 274 48 48 chr10 12688558 12688642 -127628123 - MIR SINE MIR -86 176 93 221 337 6 25 chr10 12690024 12690187 -127626578 + CT-rich Low_complexity Low_complexity 5 164 0 420 138 0 58 chr10 12690657 12690690 -127626075 - AluSp SINE Alu -147 166 133 1891 130 7 7 chr10 12690690 12690989 -127625776 - AluSx SINE Alu -13 299 1 420 138 0 58 chr10 12690989 12691042 -127625723 - AluSp SINE Alu -180 133 85 28 29 0 0 chr10 12693212 12693247 -127623518 + AT_rich Low_complexity Low_complexity 1 35 0 1437 130 79 7 chr10 12693313 12693590 -127623175 - AluSg SINE Alu 0 300 4 243 88 0 0 chr10 12693928 12693962 -127622803 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 722 57 0 71 chr10 12694227 12694368 -127622397 - AluSc SINE Alu -6 303 173 356 288 10 35 chr10 12694518 12694768 -127621997 + CT-rich Low_complexity Low_complexity 1 243 0 1966 92 6 63 chr10 12697663 12697979 -127618786 + AluY SINE Alu 1 298 -13 1032 174 85 9 chr10 12698024 12698236 -127618529 + AluJb SINE Alu 3 230 -82 180 200 0 0 chr10 12699071 12699111 -127617654 + A-rich Low_complexity Low_complexity 3 42 0 1479 180 24 7 chr10 12699388 12699683 -127617082 - AluJo SINE Alu -12 300 1 2147 117 0 0 chr10 12699829 12700129 -127616636 + AluSx SINE Alu 1 300 -12 270 0 0 0 chr10 12700796 12700826 -127615939 + (TG)n Simple_repeat Simple_repeat 1 30 0 1756 150 7 7 chr10 12701001 12701294 -127615471 - AluJo SINE Alu -19 293 1 1208 286 198 7 chr10 12701294 12701861 -127614904 + L2 LINE L2 1033 1707 -1607 1109 114 12 0 chr10 12701861 12702028 -127614737 + AluSx SINE Alu 1 169 -143 404 116 14 0 chr10 12702174 12702243 -127614522 + AluS SINE Alu 230 299 -10 2011 113 0 0 chr10 12702434 12702761 -127614004 + AluSx SINE Alu 1 327 0 545 129 35 0 chr10 12703163 12703248 -127613517 + FLAM_C SINE Alu 24 111 -32 216 0 0 0 chr10 12703295 12703319 -127613446 + (A)n Simple_repeat Simple_repeat 1 24 0 1988 123 0 23 chr10 12703319 12703621 -127613144 + AluSx SINE Alu 6 300 -12 1812 161 0 13 chr10 12703623 12703933 -127612832 + AluJb SINE Alu 1 306 -6 1933 147 10 0 chr10 12703933 12704233 -127612532 + AluSx SINE Alu 1 303 -9 607 103 0 0 chr10 12704244 12704322 -127612443 + U6 snRNA snRNA 1 78 -29 2181 123 0 0 chr10 12704393 12704695 -127612070 + AluSx SINE Alu 1 302 -10 834 195 61 6 chr10 12704697 12704861 -127611904 + AluSg/x SINE Alu 137 309 -3 503 185 167 0 chr10 12705082 12705190 -127611575 - MER96 DNA MER1_type? 0 175 50 1911 130 3 13 chr10 12705227 12705526 -127611239 + AluSx SINE Alu 1 296 -16 2346 46 0 0 chr10 12705528 12705813 -127610952 + AluY SINE Alu 1 285 -26 342 0 0 0 chr10 12705813 12705851 -127610914 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2140 101 3 0 chr10 12706019 12706315 -127610450 + AluSx SINE Alu 1 297 -15 432 130 0 0 chr10 12706513 12706582 -127610183 + AluS SINE Alu 233 301 -8 1612 175 20 0 chr10 12706678 12706970 -127609795 - AluJo SINE Alu -14 298 1 2087 126 0 0 chr10 12707116 12707417 -127609348 + AluSx SINE Alu 1 301 -11 198 0 0 0 chr10 12708082 12708104 -127608661 + (TG)n Simple_repeat Simple_repeat 1 22 0 1756 150 7 7 chr10 12708280 12708573 -127608192 - AluJo SINE Alu -19 293 1 1642 250 127 123 chr10 12708573 12709140 -127607625 + L2 LINE L2 1033 1596 -1718 1914 138 0 3 chr10 12709140 12709445 -127607320 + AluSx SINE Alu 1 304 -8 1642 250 127 123 chr10 12709445 12709542 -127607223 + L2 LINE L2 1596 1691 -1623 1782 150 7 26 chr10 12709542 12709849 -127606916 - AluSx SINE Alu -11 301 1 1642 250 127 123 chr10 12709849 12709863 -127606902 + L2 LINE L2 1691 1703 -1611 1180 176 30 4 chr10 12709863 12710096 -127606669 + L1MA7 LINE L1 6049 6287 -4 1642 250 127 123 chr10 12710096 12710136 -127606629 + L2 LINE L2 1703 1741 -1573 1280 122 61 65 chr10 12710136 12710298 -127606467 + MER30 DNA MER1_type 1 163 -67 2234 79 3 0 chr10 12710298 12710590 -127606175 - AluY SINE Alu -18 293 1 1280 122 61 65 chr10 12710590 12710656 -127606109 + MER30 DNA MER1_type 163 228 -2 1642 250 127 123 chr10 12710656 12710779 -127605986 + L2 LINE L2 1741 1862 -1452 195 42 0 0 chr10 12710779 12710803 -127605962 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 792 74 0 0 chr10 12710806 12710901 -127605864 - FLAM_C SINE Alu -24 119 25 1642 250 127 123 chr10 12710901 12711188 -127605577 + L2 LINE L2 1863 2268 -1046 242 229 16 0 chr10 12711289 12711350 -127605415 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 380 264 25 126 chr10 12711384 12711428 -127605337 + L1MC4 LINE L1 7826 7873 -169 1803 129 32 4 chr10 12711428 12711738 -127605027 - AluSx SINE Alu 0 318 1 380 264 25 126 chr10 12711738 12711930 -127604835 + L1MC4 LINE L1 7873 8040 -2 187 203 34 85 chr10 12712017 12712030 -127604735 + MER5A DNA MER1_type 134 146 -43 1926 131 3 7 chr10 12712030 12712335 -127604430 + AluSx SINE Alu 1 304 -8 187 203 34 85 chr10 12712335 12712380 -127604385 + MER5A DNA MER1_type 146 189 0 2030 127 0 0 chr10 12712893 12713185 -127603580 + AluSx SINE Alu 1 292 -20 2282 87 0 6 chr10 12713325 12713637 -127603128 + AluY SINE Alu 1 310 -1 2194 109 3 0 chr10 12714486 12714797 -127601968 - AluSq SINE Alu -1 312 1 1782 139 38 7 chr10 12715004 12715291 -127601474 + AluJo SINE Alu 1 296 -16 1759 114 57 0 chr10 12715476 12715739 -127601026 + AluSx SINE Alu 26 303 -9 279 207 171 64 chr10 12715758 12715898 -127600867 + L1MC4 LINE L1 7744 7898 -144 758 168 0 0 chr10 12715900 12716025 -127600740 + AluJb SINE Alu 184 308 -4 1977 176 18 18 chr10 12716103 12716137 -127600628 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12716137 12716425 -127600340 + AluSx SINE Alu 1 293 -19 1977 176 18 18 chr10 12716425 12716781 -127599984 + L1MB7 LINE L1 5826 6184 0 1406 198 7 4 chr10 12716795 12717073 -127599692 + AluJo SINE Alu 1 279 -33 372 43 0 0 chr10 12717073 12717119 -127599646 + (CA)n Simple_repeat Simple_repeat 1 46 0 1990 124 11 0 chr10 12717388 12717670 -127599095 - AluSx SINE Alu -27 285 1 1180 176 30 4 chr10 12717684 12717917 -127598848 + L1MA7 LINE L1 6049 6287 -4 1107 96 78 6 chr10 12717959 12718125 -127598640 + MER30 DNA MER1_type 1 178 -52 314 125 0 0 chr10 12718229 12718277 -127598488 + Alu SINE Alu 252 299 -3 1961 179 18 18 chr10 12718364 12718398 -127598367 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12718398 12718686 -127598079 + AluSx SINE Alu 1 293 -19 1961 179 18 18 chr10 12718686 12719042 -127597723 + L1MB7 LINE L1 5826 6184 0 355 160 0 0 chr10 12719056 12719106 -127597659 + Alu SINE Alu 1 50 -250 896 106 0 0 chr10 12719107 12719230 -127597535 + AluSg/x SINE Alu 161 283 -29 243 88 0 0 chr10 12719230 12719264 -127597501 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2293 96 0 0 chr10 12719529 12719832 -127596933 - AluSc SINE Alu -6 303 1 1530 204 7 3 chr10 12720074 12720373 -127596392 + AluSx SINE Alu 1 300 -12 2061 84 66 0 chr10 12721414 12721701 -127595064 + AluSg SINE Alu 1 306 -4 2035 126 3 0 chr10 12721894 12722196 -127594569 + AluSx SINE Alu 1 303 -9 1104 145 0 25 chr10 12723027 12723227 -127593538 - AluSx SINE Alu -117 195 1 267 257 111 42 chr10 12723227 12723371 -127593394 + L1ME3A LINE L1 5922 6075 -95 1667 187 3 7 chr10 12723433 12723743 -127593022 - AluJo SINE Alu -3 309 1 2084 115 3 0 chr10 12723772 12724068 -127592697 + AluSx SINE Alu 6 302 -10 420 235 0 0 chr10 12724130 12724211 -127592554 - MER81 DNA DNA -33 81 1 194 241 19 19 chr10 12724495 12724549 -127592216 + L2 LINE L2 3256 3309 -4 2108 125 0 3 chr10 12725061 12725372 -127591393 + AluSq SINE Alu 4 313 0 593 195 0 8 chr10 12725400 12725518 -127591247 + L1MB5 LINE L1 6050 6166 -8 31 44 0 0 chr10 12725537 12725582 -127591183 + AT_rich Low_complexity Low_complexity 1 45 0 1352 154 135 0 chr10 12725982 12726249 -127590516 + AluJb SINE Alu 1 303 -9 746 125 0 0 chr10 12726142 12726254 -127590511 + AluJb SINE Alu 197 308 -4 430 208 21 0 chr10 12726502 12726598 -127590167 - Charlie5 DNA MER1_type -27 2585 2488 1239 101 6 0 chr10 12726598 12726776 -127589989 - AluSg/x SINE Alu -5 307 129 1682 82 0 43 chr10 12726789 12727071 -127589694 - AluY SINE Alu 0 311 42 1863 110 3 69 chr10 12727402 12727584 -127589181 - AluSx SINE Alu -14 298 144 2554 36 3 0 chr10 12727584 12727893 -127588872 - AluY SINE Alu -1 310 1 1863 110 3 69 chr10 12727893 12728028 -127588737 - AluSx SINE Alu -168 144 2 896 190 39 3 chr10 12728028 12728256 -127588509 - MER33 DNA MER1_type -259 65 1 1671 129 0 30 chr10 12728484 12728748 -127588017 + AluSx SINE Alu 1 256 -56 1815 128 0 62 chr10 12728790 12729096 -127587669 + AluSx SINE Alu 3 289 -23 506 251 157 45 chr10 12729471 12729694 -127587071 + MIR SINE MIR 15 262 0 1353 177 29 42 chr10 12729944 12730083 -127586682 + AluJb SINE Alu 1 140 -172 2189 107 0 0 chr10 12730083 12730381 -127586384 + AluSq SINE Alu 1 298 -15 1353 177 29 42 chr10 12730381 12730551 -127586214 + AluJb SINE Alu 140 306 -6 810 132 0 21 chr10 12730599 12730743 -127586022 - AluSp/q SINE Alu -6 307 167 29 70 0 0 chr10 12731824 12731881 -127584884 + GC_rich Low_complexity Low_complexity 1 57 0 1127 133 40 0 chr10 12731927 12732100 -127584665 - AluY SINE Alu -129 182 3 1573 128 163 4 chr10 12732325 12732583 -127584182 + AluSx SINE Alu 1 299 -3 24 0 0 0 chr10 12732619 12732643 -127584122 + AT_rich Low_complexity Low_complexity 1 24 0 860 171 0 74 chr10 12732938 12733114 -127583651 - AluSg/x SINE Alu -13 299 137 2311 167 18 58 chr10 12733269 12733451 -127583314 + L1MA4 LINE L1 5768 5956 -344 2136 102 0 7 chr10 12733451 12733754 -127583011 + AluSq SINE Alu 1 301 -12 2311 167 18 58 chr10 12733754 12734122 -127582643 + L1MA4 LINE L1 5956 6296 -4 1537 167 7 24 chr10 12734227 12734538 -127582227 - AluJo SINE Alu 0 306 1 21 0 0 0 chr10 12734538 12734559 -127582206 + AT_rich Low_complexity Low_complexity 1 21 0 825 174 0 0 chr10 12734566 12734698 -127582067 + FRAM SINE Alu 9 140 -36 803 169 6 38 chr10 12734711 12734894 -127581871 + AluSg/x SINE Alu 120 296 -16 203 286 96 70 chr10 12735002 12735201 -127581564 - L2 LINE L2 -5 3308 3105 1905 126 17 0 chr10 12735304 12735598 -127581167 + AluSx SINE Alu 1 299 -13 825 160 17 40 chr10 12735775 12735950 -127580815 - AluJo SINE Alu -57 255 85 363 216 82 10 chr10 12736185 12736282 -127580483 + MLT1G3 LTR MaLR 1 104 -491 440 197 210 4 chr10 12736338 12736526 -127580239 + MLT1G3 LTR MaLR 170 442 -148 1739 165 0 19 chr10 12736613 12736929 -127579836 + AluJo SINE Alu 1 310 -2 2518 39 0 13 chr10 12737108 12737419 -127579346 + AluY SINE Alu 1 307 -4 209 218 0 46 chr10 12737794 12737881 -127578884 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 494 55 96 0 chr10 12738946 12739019 -127577746 + MADE1 DNA Mariner 1 80 0 2037 107 0 0 chr10 12739089 12739379 -127577386 + AluSx SINE Alu 5 294 -18 601 84 21 0 chr10 12739875 12739970 -127576795 - AluY SINE Alu -2 309 213 988 108 0 0 chr10 12740126 12740274 -127576491 + AluSg/x SINE Alu 151 298 -14 2022 130 0 0 chr10 12740289 12740588 -127576177 + AluSx SINE Alu 1 299 -13 2361 32 0 3 chr10 12741960 12742265 -127574500 - AluY SINE Alu 0 304 1 1415 91 5 23 chr10 12742729 12742949 -127573816 + AluSg/x SINE Alu 87 302 -8 1920 74 19 11 chr10 12743063 12743333 -127573432 + L1PA8 LINE L1 5895 6166 -6 24 0 0 0 chr10 12743333 12743357 -127573408 + AT_rich Low_complexity Low_complexity 1 24 0 2046 185 5 20 chr10 12743467 12743872 -127572893 - L1PB4 LINE L1 0 6156 5758 192 217 0 0 chr10 12743882 12743928 -127572837 + (TG)n Simple_repeat Simple_repeat 1 46 0 1458 166 19 60 chr10 12744313 12744483 -127572282 - AluSx SINE Alu 0 302 149 1645 145 4 22 chr10 12744483 12744626 -127572139 - AluSx SINE Alu -37 275 138 2085 128 3 0 chr10 12744626 12744938 -127571827 - AluSq SINE Alu 0 313 1 1645 145 4 22 chr10 12744938 12745070 -127571695 - AluSx SINE Alu -174 138 5 1458 166 19 60 chr10 12745070 12745213 -127571552 - AluSx SINE Alu -153 149 2 1391 185 57 10 chr10 12745315 12745613 -127571152 - AluJb SINE Alu 0 312 1 190 269 0 0 chr10 12745679 12745731 -127571034 + MIR SINE MIR 156 207 -55 1999 120 3 0 chr10 12745733 12746017 -127570748 + AluSx SINE Alu 1 285 -27 225 83 0 0 chr10 12746017 12746053 -127570712 + (CATA)n Simple_repeat Simple_repeat 2 37 0 2049 222 67 39 chr10 12746394 12746961 -127569804 - L1ME2 LINE L1 -12 6152 5564 2085 96 0 0 chr10 12746961 12747270 -127569495 - AluSx SINE Alu 0 309 1 2049 222 67 39 chr10 12747270 12747314 -127569451 - L1ME2 LINE L1 -600 5564 5523 2195 83 0 32 chr10 12747540 12747674 -127569091 + AluSx SINE Alu 2 139 -173 2352 77 0 0 chr10 12747674 12747984 -127568781 + AluY SINE Alu 1 310 -1 2195 83 0 32 chr10 12747984 12748161 -127568604 + AluSx SINE Alu 139 303 -9 496 295 115 53 chr10 12748161 12748483 -127568282 - MER93a LTR ERV1 -60 342 1 2004 110 0 17 chr10 12748781 12749071 -127567694 - AluY SINE Alu -26 285 1 1940 137 0 0 chr10 12749072 12749371 -127567394 - AluSx SINE Alu -13 299 1 341 221 61 72 chr10 12749699 12749880 -127566885 - L1ME4a LINE L1 -16 6105 5927 869 204 57 28 chr10 12749895 12750014 -127566751 - MER20 DNA MER1_type -1 218 89 1766 178 58 76 chr10 12750014 12750464 -127566301 - LTR47B LTR ERVL 0 443 2 869 204 57 28 chr10 12750464 12750555 -127566210 - MER20 DNA MER1_type -130 89 2 261 235 61 31 chr10 12750556 12750654 -127566111 - L1ME4a LINE L1 -238 5883 5783 452 218 55 0 chr10 12750769 12750879 -127565886 - L1MB2 LINE L1 0 6171 6056 230 211 10 77 chr10 12750915 12751019 -127565746 + T-rich Low_complexity Low_complexity 6 102 0 809 89 27 0 chr10 12751134 12751246 -127565519 - AluSg/x SINE Alu -19 291 177 2078 108 7 0 chr10 12751628 12751914 -127564851 + AluSx SINE Alu 5 292 -20 1064 145 62 10 chr10 12752100 12752293 -127564472 - AluJo SINE Alu -109 203 1 267 187 45 75 chr10 12752480 12752614 -127564151 - L1ME4a LINE L1 -152 5969 5840 520 254 31 15 chr10 12752647 12752777 -127563988 - L2 LINE L2 -2 3311 3180 553 256 63 74 chr10 12752779 12752942 -127563823 - L2 LINE L2 -251 3062 2895 1703 151 7 3 chr10 12752942 12753233 -127563532 + AluJb SINE Alu 1 292 -20 553 256 63 74 chr10 12753233 12753387 -127563378 - L2 LINE L2 -418 2895 2741 631 279 113 38 chr10 12753429 12753820 -127562945 - L1ME4a LINE L1 -388 5733 5314 469 231 0 0 chr10 12753837 12753941 -127562824 + U13 snRNA snRNA 1 104 0 207 0 0 0 chr10 12754187 12754210 -127562555 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1951 114 11 0 chr10 12754219 12754492 -127562273 - AluSq SINE Alu -37 276 1 571 302 97 73 chr10 12754653 12754680 -127562085 - L1ME4a LINE L1 -812 5334 5309 2435 64 0 3 chr10 12754680 12754992 -127561773 - AluY SINE Alu 0 311 1 571 302 97 73 chr10 12754992 12755069 -127561696 - L1ME4a LINE L1 -837 5309 5235 1629 178 10 0 chr10 12755069 12755362 -127561403 - AluJb SINE Alu -13 299 4 571 302 97 73 chr10 12755362 12755577 -127561188 - L1ME4a LINE L1 -911 5235 4995 2033 128 7 0 chr10 12755577 12755875 -127560890 + AluSx SINE Alu 1 300 -12 571 302 97 73 chr10 12755875 12756057 -127560708 - L1ME4a LINE L1 -1151 4995 4819 2225 77 0 17 chr10 12756114 12756412 -127560353 - AluSg SINE Alu -15 295 3 2303 92 3 0 chr10 12756416 12756721 -127560044 - AluSp SINE Alu -7 306 1 1900 104 57 7 chr10 12756721 12757000 -127559765 - AluSc SINE Alu -15 294 1 2047 122 3 0 chr10 12757261 12757565 -127559200 - AluSx SINE Alu -7 305 1 673 278 82 11 chr10 12758403 12758684 -127558081 + HsTC2 DNA Tc2 4 304 -1594 506 196 116 32 chr10 12758666 12758855 -127557910 + HsTC2 DNA Tc2 1692 1896 -2 * 2258 74 0 7 chr10 12758953 12759251 -127557514 - AluSg SINE Alu -14 296 1 2371 81 0 0 chr10 12759477 12759786 -127556979 - AluSc SINE Alu 0 309 1 953 95 0 95 chr10 12759924 12760092 -127556673 - AluSp/q SINE Alu -4 309 158 1930 125 14 0 chr10 12760267 12760556 -127556209 - AluSx SINE Alu -19 293 1 2061 114 3 10 chr10 12760655 12760788 -127555977 + AluSx SINE Alu 2 134 -178 2087 91 40 0 chr10 12760788 12761085 -127555680 + AluSc SINE Alu 1 309 0 2061 114 3 10 chr10 12761085 12761249 -127555516 + AluSx SINE Alu 134 297 -15 259 167 21 0 chr10 12762131 12762179 -127554586 - MER112 DNA MER1_type -108 152 104 339 209 70 85 chr10 12763512 12763641 -127553124 - L1ME LINE L1 -304 5817 5691 1199 116 0 0 chr10 12765506 12765678 -127551087 - AluSq SINE Alu -8 305 134 2211 91 3 3 chr10 12765678 12765976 -127550789 - AluSc SINE Alu -11 298 1 2096 116 3 0 chr10 12766624 12766925 -127549840 + AluSx SINE Alu 1 302 -10 1112 43 7 0 chr10 12767147 12767287 -127549478 - AluY SINE Alu -6 305 165 202 266 16 16 chr10 12767421 12767485 -127549280 + GA-rich Low_complexity Low_complexity 4 67 0 1678 118 23 59 chr10 12767733 12768039 -127548726 + AluSx SINE Alu 7 301 -11 982 157 0 0 chr10 12768039 12768192 -127548573 + AluSg/x SINE Alu 132 284 -26 234 0 0 0 chr10 12768192 12768218 -127548547 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2242 93 0 3 chr10 12768580 12768882 -127547883 - AluSx SINE Alu -11 301 1 1274 39 0 0 chr10 12768940 12769096 -127547669 - AluY SINE Alu -13 298 143 1460 223 0 13 chr10 12769224 12769534 -127547231 + AluJo SINE Alu 1 306 -6 647 74 0 11 chr10 12769534 12769629 -127547136 + (GGAA)n Simple_repeat Simple_repeat 1 94 0 2231 111 0 0 chr10 12770018 12770325 -127546440 + AluSx SINE Alu 1 307 -5 2024 116 0 3 chr10 12771104 12771397 -127545368 + AluSx SINE Alu 1 292 -20 1393 171 22 67 chr10 12771498 12771813 -127544952 - AluJo SINE Alu -11 301 1 1620 180 0 3 chr10 12771864 12772159 -127544606 - AluJo SINE Alu -18 294 1 2022 107 21 0 chr10 12773002 12773283 -127543482 + AluSx SINE Alu 1 287 -25 724 83 10 0 chr10 12773368 12773464 -127543301 + AluY SINE Alu 2 98 -213 2119 111 10 0 chr10 12773470 12773777 -127542988 + AluY SINE Alu 1 310 -1 36 23 0 0 chr10 12773778 12773821 -127542944 + AT_rich Low_complexity Low_complexity 1 43 0 1372 111 5 0 chr10 12773821 12774010 -127542755 + AluSc SINE Alu 1 190 -119 31 0 0 0 chr10 12774019 12774050 -127542715 + AT_rich Low_complexity Low_complexity 1 31 0 1627 128 6 98 chr10 12774064 12774392 -127542373 - AluSx SINE Alu -14 298 1 1453 117 0 0 chr10 12774669 12774875 -127541890 - AluSg/x SINE Alu -20 292 87 2236 89 0 0 chr10 12774928 12775220 -127541545 - AluSp SINE Alu -21 292 1 37 23 0 0 chr10 12775640 12775684 -127541081 + AT_rich Low_complexity Low_complexity 1 44 0 2087 96 3 0 chr10 12775767 12776071 -127540694 + AluSx SINE Alu 1 305 0 2000 100 4 4 chr10 12776255 12776536 -127540229 - AluSq SINE Alu -32 281 1 1424 90 33 94 chr10 12776561 12776806 -127539959 - MER30 DNA MER1_type 0 230 1 2119 66 0 69 chr10 12776814 12777134 -127539631 - AluY SINE Alu -13 298 1 372 240 0 50 chr10 12777410 12777510 -127539255 + MLT1H1 LTR MaLR 461 555 0 283 288 224 0 chr10 12777669 12777818 -127538947 + MIR SINE MIR 30 208 -54 1774 158 7 10 chr10 12777841 12778145 -127538620 - AluJb SINE Alu -9 303 1 1429 150 33 48 chr10 12778619 12778693 -127538072 - AluJb SINE Alu -7 305 231 2094 54 98 4 chr10 12778693 12778970 -127537795 - AluY SINE Alu -8 303 1 1429 150 33 48 chr10 12778970 12779168 -127537597 - AluJb SINE Alu -81 231 37 2021 129 3 0 chr10 12779248 12779558 -127537207 - AluY SINE Alu 0 311 1 2132 81 0 62 chr10 12779669 12779990 -127536775 - AluY SINE Alu -10 301 1 239 364 108 0 chr10 12780073 12780249 -127536516 + L3 LINE CR1 509 703 -874 2220 96 3 3 chr10 12780298 12780601 -127536164 - AluSc SINE Alu -6 303 1 302 343 37 0 chr10 12780604 12780738 -127536027 + L2 LINE L2 1984 2122 -1192 854 188 30 6 chr10 12780738 12780903 -127535862 + FRAM SINE Alu 1 167 -9 1551 131 62 0 chr10 12781066 12781310 -127535455 + AluSx SINE Alu 43 301 -11 1157 127 6 0 chr10 12781360 12781533 -127535232 - AluSg/x SINE Alu -12 298 125 2133 126 0 0 chr10 12781537 12781846 -127534919 - AluSx SINE Alu -3 309 1 324 294 174 38 chr10 12782067 12782332 -127534433 + L2 LINE L2 210 510 -2804 1988 116 3 32 chr10 12782452 12782763 -127534002 + AluSq SINE Alu 1 302 -11 313 247 94 88 chr10 12782884 12782996 -127533769 + L1ME4a LINE L1 5927 6042 -79 757 128 0 108 chr10 12782996 12783033 -127533732 - FLAM_A SINE Alu -169 133 94 2197 85 7 0 chr10 12783033 12783326 -127533439 + AluY SINE Alu 1 295 -16 757 128 0 108 chr10 12783326 12783436 -127533329 - FLAM_A SINE Alu -208 94 2 313 247 94 88 chr10 12783436 12783493 -127533272 + L1ME4a LINE L1 6042 6097 -24 2019 71 3 27 chr10 12783503 12783800 -127532965 - AluY SINE Alu -21 290 1 1624 156 7 10 chr10 12783929 12784217 -127532548 + AluJo SINE Alu 1 287 -25 1538 157 0 30 chr10 12785685 12785984 -127530781 + AluJo SINE Alu 7 296 -16 2022 117 0 16 chr10 12785984 12786317 -127530448 + AluSc SINE Alu 1 309 0 381 281 21 0 chr10 12786393 12786489 -127530276 + MER106A DNA MER1_type 2 99 -137 378 205 145 51 chr10 12787040 12787157 -127529608 - MER5B DNA MER1_type 0 178 51 1805 164 157 5 chr10 12787159 12787592 -127529173 - L1MB8 LINE L1 0 6178 5680 536 230 52 0 chr10 12787595 12787730 -127529035 - L1MB8 LINE L1 -588 5586 5445 565 135 58 19 chr10 12787730 12787834 -127528931 - AluJo/FRAM SINE Alu -70 242 135 2068 124 3 0 chr10 12787836 12788143 -127528622 - AluSg SINE Alu 0 310 3 327 233 12 23 chr10 12788144 12788230 -127528535 - L1MB8 LINE L1 -1184 4962 4878 277 115 77 19 chr10 12788354 12788406 -127528359 - MER5B DNA MER1_type -123 55 1 369 109 0 0 chr10 12789562 12789617 -127527148 + (TCC)n Simple_repeat Simple_repeat 2 56 0 186 313 0 45 chr10 12792391 12792458 -127524307 - L2 LINE L2 -6 3266 3203 2186 81 7 7 chr10 12792551 12792847 -127523918 - AluSc SINE Alu -13 296 1 2185 104 3 0 chr10 12793278 12793586 -127523179 - AluSx SINE Alu -3 309 1 745 182 46 36 chr10 12795673 12795931 -127520834 - L1MB4 LINE L1 -5 6175 5899 787 227 116 5 chr10 12795968 12796175 -127520590 - L1MB4 LINE L1 -390 5790 5561 2077 116 0 0 chr10 12796205 12796547 -127520218 - AluSx SINE Alu 0 343 2 638 106 163 32 chr10 12796805 12796928 -127519837 - FRAM SINE Alu -17 159 21 2027 74 35 18 chr10 12797742 12798026 -127518739 - AluSq SINE Alu -24 289 1 2174 92 0 7 chr10 12798395 12798689 -127518076 - AluSg1 SINE Alu -17 292 1 1942 129 0 35 chr10 12798789 12799100 -127517665 - AluSx SINE Alu -12 300 1 1992 109 3 3 chr10 12799561 12799876 -127516889 + AluSq SINE Alu 1 315 0 1651 164 14 7 chr10 12799887 12800174 -127516591 + AluJb SINE Alu 1 289 -23 520 163 16 10 chr10 12800178 12800424 -127516341 + AluJb SINE Alu 3 298 -14 314 91 0 26 chr10 12800450 12800511 -127516254 + AluSp SINE Alu 1 38 -262 1755 89 4 0 chr10 12800511 12800747 -127516018 + AluSp SINE Alu 71 307 -6 2100 124 0 0 chr10 12800847 12801146 -127515619 + AluSx SINE Alu 1 299 -13 2177 108 0 0 chr10 12801365 12801660 -127515105 + AluSx SINE Alu 1 295 -17 2294 84 0 0 chr10 12801763 12802072 -127514693 + AluY SINE Alu 1 309 -2 232 310 46 11 chr10 12805242 12805329 -127511436 + MIR3 SINE MIR 104 193 -15 1784 144 54 30 chr10 12805573 12805906 -127510859 - MER2 DNA MER2_type -3 341 1 475 146 49 0 chr10 12805908 12805990 -127510775 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 * 1190 188 39 8 chr10 12805987 12806221 -127510544 - Tigger4(Zombi) DNA MER2_type -2288 443 203 934 132 0 0 chr10 12806221 12806357 -127510408 + AluJo SINE Alu 1 136 -176 1652 168 30 3 chr10 12806381 12806678 -127510087 + AluSx SINE Alu 1 305 -7 1064 191 44 10 chr10 12806679 12806883 -127509882 - Tigger4(Zombi) DNA MER2_type -2520 211 1 258 299 72 21 chr10 12807090 12807187 -127509578 + MER5A DNA MER1_type 67 168 -21 231 346 48 10 chr10 12807098 12807202 -127509563 - MER5B DNA MER1_type -64 114 7 * 2249 98 0 0 chr10 12807258 12807563 -127509202 - AluSx SINE Alu -7 305 1 410 252 83 54 chr10 12808369 12808568 -127508197 - L1ME4a LINE L1 -261 5860 5649 1941 107 16 44 chr10 12808568 12808887 -127507878 - AluSx SINE Alu -2 310 1 410 252 83 54 chr10 12808887 12808965 -127507800 - L1ME4a LINE L1 -472 5649 5575 317 238 0 111 chr10 12809755 12809881 -127506884 + L1ME3A LINE L1 5988 6099 -71 2162 104 10 0 chr10 12811146 12811454 -127505311 - AluSx SINE Alu -1 311 1 1554 176 0 21 chr10 12811570 12811860 -127504905 - AluJb SINE Alu -24 288 5 225 237 66 40 chr10 12811891 12811967 -127504798 - HAL1 LINE L1 -9 2498 2421 796 238 18 35 chr10 12812008 12812235 -127504530 - HAL1 LINE L1 -846 1661 1439 394 196 29 80 chr10 12812256 12812394 -127504371 - HAL1 LINE L1 -1140 1367 1237 1171 154 103 26 chr10 12812402 12812635 -127504130 + AluJb SINE Alu 1 251 -61 2011 89 0 35 chr10 12812971 12813284 -127503481 + AluSc SINE Alu 1 302 -7 482 287 63 30 chr10 12813298 12813535 -127503230 - L2 LINE L2 -87 3226 2982 2154 96 3 0 chr10 12813645 12813937 -127502828 - AluSq SINE Alu -20 293 1 2250 73 14 0 chr10 12814426 12814715 -127502050 - AluY SINE Alu -13 298 6 2127 123 0 0 chr10 12815138 12815440 -127501325 - AluSx SINE Alu -10 302 1 2171 78 3 10 chr10 12815633 12815958 -127500807 + AluY SINE Alu 1 311 0 584 200 17 8 chr10 12816149 12816269 -127500496 + FLAM_A SINE Alu 14 134 -8 765 119 0 0 chr10 12816728 12816865 -127499900 + AluSc SINE Alu 174 310 0 24 53 0 0 chr10 12817063 12817101 -127499664 + AT_rich Low_complexity Low_complexity 1 38 0 1877 126 17 7 chr10 12817103 12817396 -127499369 + AluSx SINE Alu 1 296 -16 187 369 46 15 chr10 12817767 12817897 -127498868 - L2 LINE L2 -911 2403 2270 2082 66 13 33 chr10 12818401 12818706 -127498059 - AluSx SINE Alu -13 299 1 1957 105 14 3 chr10 12819411 12819706 -127497059 + AluSx SINE Alu 1 298 -14 919 175 113 16 chr10 12821208 12821465 -127495300 + L1MA8 LINE L1 6000 6281 -10 2311 58 0 7 chr10 12821913 12822208 -127494557 - AluY SINE Alu -18 293 1 342 129 0 48 chr10 12822255 12822317 -127494448 - Alu SINE Alu -11 290 232 34 24 0 0 chr10 12822317 12822358 -127494407 + AT_rich Low_complexity Low_complexity 1 41 0 720 224 213 12 chr10 12823859 12824113 -127492652 + L2 LINE L2 3008 3312 -1 2233 89 3 0 chr10 12824348 12824651 -127492114 - AluY SINE Alu -6 305 2 2094 128 3 0 chr10 12824652 12824957 -127491808 - AluSx SINE Alu -6 306 1 1501 160 19 4 chr10 12825337 12825593 -127491172 - AluSx SINE Alu -50 262 3 431 198 0 0 chr10 12825718 12825799 -127490966 + AluJ/FRAM SINE Alu 219 299 -13 711 168 0 0 chr10 12825953 12826066 -127490699 + AluSq/x SINE Alu 2 114 -198 1184 112 0 103 chr10 12826066 12826290 -127490475 - AluSg SINE Alu -109 201 1 27 0 0 0 chr10 12826290 12826317 -127490448 + AT_rich Low_complexity Low_complexity 1 27 0 786 233 99 15 chr10 12826390 12826592 -127490173 + MLT1J LTR MaLR 1 219 -292 248 181 48 72 chr10 12826651 12826734 -127490031 + MLT1-int LTR MaLR 1 81 -1290 2035 129 0 0 chr10 12826991 12827286 -127489479 + AluSx SINE Alu 1 295 -17 1506 143 10 57 chr10 12827942 12828256 -127488509 + AluJo SINE Alu 1 299 -13 999 103 0 0 chr10 12829276 12829412 -127487353 + AluSq/x SINE Alu 1 136 -176 2277 74 3 0 chr10 12829412 12829745 -127487020 + AluSp SINE Alu 1 334 0 2021 83 0 43 chr10 12829752 12830053 -127486712 + AluSg SINE Alu 9 296 -14 210 266 213 21 chr10 12830351 12830445 -127486320 - L2 LINE L2 -44 3228 3117 1471 109 0 4 chr10 12830592 12830788 -127485977 - AluSg/x SINE Alu 0 312 116 216 0 0 0 chr10 12830788 12830812 -127485953 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1471 109 0 4 chr10 12830812 12830844 -127485921 - AluSg/x SINE Alu -196 116 85 1722 90 0 71 chr10 12830847 12830963 -127485802 - AluSp SINE Alu -66 247 124 2445 63 0 0 chr10 12830963 12831263 -127485502 - AluY SINE Alu -11 300 1 1722 90 0 71 chr10 12831263 12831412 -127485353 - AluSp SINE Alu -189 124 1 953 112 0 14 chr10 12831412 12831555 -127485210 - AluSq/x SINE Alu -172 141 1 1830 139 13 3 chr10 12832142 12832445 -127484320 - AluSx SINE Alu -1 311 6 1544 102 0 0 chr10 12833053 12833258 -127483507 - AluSc SINE Alu -104 205 1 1004 96 0 0 chr10 12833258 12833393 -127483372 - AluSq/x SINE Alu -177 135 1 1957 125 6 19 chr10 12833727 12834038 -127482727 - AluSq SINE Alu 0 313 7 1863 86 0 4 chr10 12834216 12834460 -127482305 - AluSq SINE Alu -57 256 14 339 315 21 55 chr10 12834492 12834533 -127482232 + HAL1 LINE L1 1526 1567 -940 1575 159 35 21 chr10 12834533 12834822 -127481943 - AluJo SINE Alu -19 293 1 339 315 21 55 chr10 12834822 12835018 -127481747 + HAL1 LINE L1 1567 1755 -752 2133 104 0 3 chr10 12835043 12835332 -127481433 + AluSx SINE Alu 1 288 -24 32 0 0 0 chr10 12835333 12835365 -127481400 + AT_rich Low_complexity Low_complexity 1 32 0 482 153 0 24 chr10 12836366 12836451 -127480314 - FLAM_A SINE Alu -3 139 57 2213 122 0 0 chr10 12836597 12836909 -127479856 + AluSx SINE Alu 1 312 0 208 265 0 0 chr10 12837069 12837118 -127479647 - L2 LINE L2 -3 3269 3221 2219 99 7 0 chr10 12837598 12837900 -127478865 + AluSg SINE Alu 1 304 -6 840 114 15 0 chr10 12838030 12838161 -127478604 - AluSc SINE Alu -2 307 175 439 321 78 5 chr10 12838161 12838243 -127478522 + L3 LINE CR1 1370 1445 -132 1924 143 0 3 chr10 12838243 12838551 -127478214 - AluSx SINE Alu -5 307 1 439 321 78 5 chr10 12838551 12838661 -127478104 + L3 LINE CR1 1445 1576 -1 1917 144 7 0 chr10 12839252 12839551 -127477214 + AluSx SINE Alu 1 301 -11 679 138 0 0 chr10 12839570 12839664 -127477101 + FLAM_C SINE Alu 25 118 -25 33 25 0 0 chr10 12839664 12839704 -127477061 + AT_rich Low_complexity Low_complexity 1 40 0 2189 102 7 0 chr10 12839719 12840024 -127476741 + AluSc SINE Alu 1 307 -2 2159 89 0 16 chr10 12840226 12840550 -127476215 - AluY SINE Alu 0 319 1 371 269 0 0 chr10 12840554 12840632 -127476133 - AluYb8 SINE Alu -11 297 220 2199 101 7 0 chr10 12840759 12841055 -127475710 + AluSg SINE Alu 13 310 0 1944 141 0 3 chr10 12841275 12841572 -127475193 + AluJo SINE Alu 1 296 -16 307 217 90 107 chr10 12841766 12841974 -127474791 - L1ME4a LINE L1 -50 6071 5861 2168 102 7 0 chr10 12841974 12842278 -127474487 - AluSg SINE Alu 0 310 5 2241 95 3 0 chr10 12842281 12842585 -127474180 - AluSp SINE Alu -8 305 1 307 217 90 107 chr10 12842585 12842616 -127474149 - L1ME4a LINE L1 -262 5859 5829 2212 92 0 3 chr10 12842616 12842910 -127473855 - AluSc SINE Alu -16 293 1 307 217 90 107 chr10 12842910 12842964 -127473801 - L1ME4a LINE L1 -292 5829 5778 333 0 0 0 chr10 12842966 12843003 -127473762 + (TG)n Simple_repeat Simple_repeat 2 38 0 2246 100 3 0 chr10 12843621 12843930 -127472835 - AluSp SINE Alu 0 313 4 342 247 50 88 chr10 12844020 12844166 -127472599 + MER5A DNA MER1_type 8 147 -42 2342 93 0 0 chr10 12844166 12844477 -127472288 - L1PA7 LINE L1 -2 6152 5842 342 247 50 88 chr10 12844477 12844512 -127472253 + MER5A DNA MER1_type 147 182 -7 222 62 0 0 chr10 12844561 12844593 -127472172 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1734 131 0 54 chr10 12844596 12844893 -127471872 - AluSx SINE Alu -31 281 1 2068 115 23 3 chr10 12845174 12845478 -127471287 - AluSg SINE Alu 0 310 1 420 217 12 0 chr10 12845626 12845709 -127471056 - L1ME4a LINE L1 -414 5707 5624 302 61 20 0 chr10 12846271 12846320 -127470445 + (TG)n Simple_repeat Simple_repeat 2 51 0 499 120 0 27 chr10 12846324 12846399 -127470366 - FLAM_A SINE Alu -25 117 45 2057 91 7 17 chr10 12846630 12846927 -127469838 - AluSg SINE Alu -16 294 1 994 126 0 0 chr10 12846927 12847070 -127469695 - AluSg SINE Alu -167 143 1 227 223 91 66 chr10 12847568 12847689 -127469076 - L1ME4a LINE L1 -1276 4870 4747 1742 148 13 33 chr10 12847749 12848052 -127468713 - AluSx SINE Alu -15 297 1 1981 97 43 0 chr10 12848072 12848351 -127468414 - AluSc SINE Alu -18 291 1 2191 111 7 0 chr10 12848670 12848976 -127467789 - AluSg SINE Alu -2 308 1 1236 179 87 103 chr10 12849382 12849510 -127467255 - Looper DNA T2_type -178 1380 1252 2172 111 0 3 chr10 12849510 12849816 -127466949 - AluSx SINE Alu -7 305 1 1236 179 87 103 chr10 12849816 12850135 -127466630 - Looper DNA T2_type -306 1252 940 1806 75 95 0 chr10 12850454 12850707 -127466058 - AluY SINE Alu -13 298 22 342 0 0 0 chr10 12850948 12850986 -127465779 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr10 12851258 12851288 -127465477 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 12851543 12851571 -127465194 + AT_rich Low_complexity Low_complexity 1 28 0 291 71 0 0 chr10 12851737 12851779 -127464986 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1279 144 52 19 chr10 12851781 12852052 -127464713 - AluY SINE Alu -31 280 1 722 173 8 15 chr10 12852054 12852187 -127464578 - AluJo/FLAM SINE Alu -169 133 2 21 0 0 0 chr10 12852419 12852440 -127464325 + AT_rich Low_complexity Low_complexity 1 21 0 701 297 130 42 chr10 12852760 12853392 -127463373 - L2 LINE L2 -213 3059 2374 589 250 54 0 chr10 12853481 12853629 -127463136 - L1ME2 LINE L1 -3 6161 6006 366 188 0 0 chr10 12853630 12853699 -127463066 - L1ME2 LINE L1 -209 5955 5887 2745 171 52 15 chr10 12853707 12854091 -127462674 - MER21B LTR ERV1 -1 862 453 2106 125 0 0 chr10 12854091 12854396 -127462369 + AluSx SINE Alu 3 307 -5 2745 171 52 15 chr10 12854396 12854533 -127462232 - MER21B LTR ERV1 -410 453 322 258 156 0 0 chr10 12854673 12854718 -127462047 + L2 LINE L2 3269 3313 0 504 264 32 7 chr10 12854781 12854936 -127461829 + MER117 DNA MER1_type 1 159 -38 1818 138 7 3 chr10 12855176 12855467 -127461298 + AluJo SINE Alu 9 300 -12 249 118 0 0 chr10 12855687 12855721 -127461044 + Tigger4(Zombi) DNA MER2_type 4 37 -2694 * 901 98 286 98 chr10 12855719 12855844 -127460921 + Tigger4(Zombi) DNA MER2_type 2452 2552 -179 3868 89 47 15 chr10 12855844 12856066 -127460699 - L1MA1 LINE L1 0 6302 6089 2163 112 0 3 chr10 12856066 12856371 -127460394 + AluSx SINE Alu 1 304 -8 3868 89 47 15 chr10 12856371 12856743 -127460022 - L1MA1 LINE L1 -213 6089 5689 901 98 286 98 chr10 12856743 12856851 -127459914 + Tigger4(Zombi) DNA MER2_type 2552 2729 -2 467 119 525 0 chr10 12857086 12857187 -127459578 - AluSg SINE Alu -155 155 2 268 175 18 35 chr10 12857305 12857362 -127459403 - LTR67 LTR ERVL -3 554 499 2268 98 0 0 chr10 12857535 12857831 -127458934 + AluSq SINE Alu 1 296 -17 1517 175 0 11 chr10 12857844 12858112 -127458653 - AluJo SINE Alu -45 267 3 2439 65 0 0 chr10 12858481 12858788 -127457977 - AluY SINE Alu -4 307 1 207 100 0 0 chr10 12858796 12858826 -127457939 + (T)n Simple_repeat Simple_repeat 1 30 0 776 102 19 0 chr10 12858866 12858974 -127457791 - FLAM_C SINE Alu -32 111 2 411 243 22 135 chr10 12858974 12859078 -127457687 + MER5B DNA MER1_type 14 128 -50 2029 112 0 32 chr10 12859078 12859391 -127457374 - AluSq SINE Alu 0 313 11 411 243 22 135 chr10 12859391 12859406 -127457359 + MER5B DNA MER1_type 128 143 -35 2155 115 0 3 chr10 12859406 12859719 -127457046 - AluSp SINE Alu -1 312 1 411 243 22 135 chr10 12859719 12859783 -127456982 + MER5B DNA MER1_type 143 177 -1 1884 157 15 68 chr10 12860108 12860502 -127456263 + MLT1B LTR MaLR 18 390 0 1996 136 3 3 chr10 12860754 12861063 -127455702 - AluSx SINE Alu -3 309 1 388 191 15 0 chr10 12861287 12861355 -127455410 + MLT1E LTR MaLR 55 123 -470 586 89 0 0 chr10 12861375 12861454 -127455311 - AluJ/FLAM SINE Alu -232 80 2 873 153 0 20 chr10 12861557 12861707 -127455058 - AluSg/x SINE Alu -8 302 156 1859 159 3 0 chr10 12862587 12862883 -127453882 - AluSx SINE Alu -12 300 4 23 33 0 0 chr10 12862895 12862925 -127453840 + AT_rich Low_complexity Low_complexity 1 30 0 1641 145 17 3 chr10 12863102 12863391 -127453374 - L1PA16 LINE L1 -9 6157 5865 2321 74 3 0 chr10 12863394 12863693 -127453072 - AluSq SINE Alu -13 300 1 1240 91 0 0 chr10 12864267 12864442 -127452323 + AluSg/x SINE Alu 136 310 0 3878 90 41 0 chr10 12864531 12865063 -127451702 - MER41A LTR ERV1 0 554 1 2348 88 0 0 chr10 12865580 12865888 -127450877 - AluSc SINE Alu -1 308 1 448 263 135 44 chr10 12866102 12866413 -127450352 + L1MC/D LINE L1 5153 5490 -748 2461 51 0 0 chr10 12866745 12867039 -127449726 + AluY SINE Alu 2 295 -16 236 197 14 28 chr10 12867073 12867144 -127449621 + (TATAA)n Simple_repeat Simple_repeat 1 70 0 763 309 87 40 chr10 12867232 12867633 -127449132 - MLT1L LTR MaLR -48 567 148 642 124 58 33 chr10 12867633 12867754 -127449011 - MER30B DNA MER1_type 0 230 107 40 21 0 0 chr10 12867760 12867807 -127448958 + AT_rich Low_complexity Low_complexity 1 47 0 805 94 15 9 chr10 12867807 12867959 -127448806 - MER30B DNA MER1_type -75 155 1 597 256 67 0 chr10 12867969 12868133 -127448632 - MER5A DNA MER1_type -4 185 11 1123 38 0 0 chr10 12868386 12868517 -127448248 + AluSg SINE Alu 1 131 -179 569 147 0 42 chr10 12868800 12868895 -127447870 - AluSg/x SINE Alu -14 296 206 2329 64 0 10 chr10 12868944 12869242 -127447523 - AluY SINE Alu -16 295 1 2168 120 0 0 chr10 12869326 12869634 -127447131 - AluSx SINE Alu -4 308 1 2468 87 6 0 chr10 12869917 12870250 -127446515 - L1PB1 LINE L1 0 6151 5817 200 108 0 27 chr10 12870325 12870362 -127446403 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 207 0 0 0 chr10 12870833 12870856 -127445909 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2176 116 3 0 chr10 12871161 12871471 -127445294 + AluSx SINE Alu 1 311 -1 4155 98 62 7 chr10 12871805 12872418 -127444347 - SVA Other Other 0 1386 740 1865 147 0 16 chr10 12872664 12872970 -127443795 + AluJb SINE Alu 1 301 -11 1795 117 78 0 chr10 12873191 12873474 -127443291 - AluSx SINE Alu -7 305 1 282 56 0 0 chr10 12873556 12873592 -127443173 + (A)n Simple_repeat Simple_repeat 1 36 0 2180 91 14 0 chr10 12874418 12874714 -127442051 - AluY SINE Alu -11 300 1 1796 141 35 0 chr10 12874814 12875104 -127441661 - AluSq SINE Alu -13 300 1 2141 109 0 0 chr10 12875268 12875561 -127441204 - AluSx SINE Alu -19 293 1 208 246 0 35 chr10 12875698 12875755 -127441010 - L2 LINE L2 -35 3237 3183 273 280 56 19 chr10 12876189 12876296 -127440469 + L1MC/D LINE L1 96 206 -5913 372 272 87 87 chr10 12876451 12876705 -127440060 + L1MC/D LINE L1 589 842 -5277 952 293 99 22 chr10 12876971 12877384 -127439381 + L1MC/D LINE L1 5296 5740 -2051 1296 131 36 18 chr10 12877396 12877618 -127439147 - AluJb SINE Alu -75 237 12 2530 40 0 0 chr10 12878194 12878494 -127438271 - AluY SINE Alu -11 300 1 1988 109 24 7 chr10 12878496 12878790 -127437975 - AluSp SINE Alu -14 299 1 1535 166 0 38 chr10 12879068 12879214 -127437551 - AluJb SINE Alu -32 280 149 1535 123 119 15 chr10 12879214 12879483 -127437282 - AluSg SINE Alu -13 297 1 1535 166 0 38 chr10 12879483 12879625 -127437140 - AluJb SINE Alu -163 149 3 1539 96 9 14 chr10 12880179 12880397 -127436368 - AluSq SINE Alu -96 217 1 979 137 0 0 chr10 12880827 12880973 -127435792 + AluSq/x SINE Alu 1 146 -167 2217 93 0 3 chr10 12880974 12881275 -127435490 + AluY SINE Alu 1 300 -11 1340 274 143 36 chr10 12881313 12882246 -127434519 - HAL1 LINE L1 -1124 1383 352 3038 136 2 2 chr10 12882678 12883126 -127433639 - MER83 LTR ERV1 0 448 1 1636 192 7 0 chr10 12883530 12883832 -127432933 - AluJo SINE Alu -8 304 1 1648 181 3 13 chr10 12883852 12884161 -127432604 - AluJb SINE Alu -6 306 1 1955 125 0 3 chr10 12884996 12885300 -127431465 - AluSx SINE Alu -9 303 1 1280 210 137 36 chr10 12886084 12886125 -127430640 + L1MC4 LINE L1 6584 6619 -1423 1715 114 84 4 chr10 12886125 12886411 -127430354 + AluSx SINE Alu 1 307 0 1280 210 137 36 chr10 12886411 12886754 -127430011 + L1MC4 LINE L1 6619 7008 -1034 1529 141 120 57 chr10 12886755 12886812 -127429953 + MER46B DNA MER2_type 2 54 -2677 589 236 0 16 chr10 12886812 12886935 -127429830 - FLAM_A SINE Alu -12 121 1 1529 141 120 57 chr10 12886935 12887210 -127429555 + MER46B DNA MER2_type 54 230 -6 2497 228 90 38 chr10 12887220 12887956 -127428809 + L1MC4 LINE L1 7012 7785 -257 1405 192 78 39 chr10 12887956 12888342 -127428423 - LTR37A LTR ERV1 -8 418 18 182 174 22 0 chr10 12890746 12890792 -127425973 + T-rich Low_complexity Low_complexity 1 47 0 298 213 52 81 chr10 12890808 12890944 -127425821 - HAL1 LINE L1 -20 2487 2356 2183 82 0 13 chr10 12892103 12892408 -127424357 + AluSx SINE Alu 1 301 -11 9246 57 7 109 chr10 12892916 12894431 -127422334 - SVA Other Other 0 1386 26 231 36 0 0 chr10 12894436 12894464 -127422301 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 2134 127 0 0 chr10 12894648 12894955 -127421810 - AluSg SINE Alu -3 307 1 21 36 0 0 chr10 12895064 12895092 -127421673 + AT_rich Low_complexity Low_complexity 1 28 0 1550 176 32 0 chr10 12895115 12895393 -127421372 - AluJo SINE Alu -25 287 1 27 0 0 0 chr10 12895427 12895454 -127421311 + AT_rich Low_complexity Low_complexity 1 27 0 1894 134 0 47 chr10 12895559 12895734 -127421031 - AluSx SINE Alu -6 306 151 2265 88 3 0 chr10 12895734 12896029 -127420736 - AluSp SINE Alu -17 296 1 1894 134 0 47 chr10 12896029 12896174 -127420591 - AluSx SINE Alu -161 151 1 269 230 122 86 chr10 12896796 12896935 -127419830 + L2 LINE L2 3165 3308 -5 203 314 58 22 chr10 12896914 12897051 -127419714 + L3 LINE CR1 1175 1316 -261 * 1266 110 12 110 chr10 12897284 12897341 -127419424 - L1MA2 LINE L1 0 6304 6243 2049 114 0 10 chr10 12897341 12897648 -127419117 - AluSx SINE Alu -4 308 5 1266 110 12 110 chr10 12897648 12897845 -127418920 - L1MA2 LINE L1 -61 6243 6075 268 286 33 11 chr10 12897882 12897973 -127418792 + MIR SINE MIR 163 255 -7 1769 172 0 0 chr10 12899186 12899482 -127417283 + AluJo SINE Alu 1 296 -16 1843 112 22 14 chr10 12899482 12899794 -127416971 + AluSg SINE Alu 1 314 0 204 293 81 64 chr10 12901605 12901888 -127414877 + L2 LINE L2 1522 1809 -1505 1844 68 8 16 chr10 12901908 12902157 -127414608 + AluY SINE Alu 47 293 -18 2240 78 0 14 chr10 12902369 12902665 -127414100 + AluSx SINE Alu 1 292 -20 2187 99 3 0 chr10 12902667 12902960 -127413805 + AluSp SINE Alu 1 294 -19 1685 91 4 9 chr10 12902971 12903202 -127413563 + AluSx SINE Alu 1 230 -82 1982 116 10 10 chr10 12903597 12903908 -127412857 - AluSx SINE Alu -1 311 1 1148 149 26 5 chr10 12903910 12904104 -127412661 - AluJb SINE Alu -21 291 94 212 305 0 0 chr10 12904151 12904210 -127412555 - MIR SINE MIR -13 249 191 774 166 0 43 chr10 12904335 12904474 -127412291 - FLAM_C SINE Alu 0 133 1 1901 139 3 0 chr10 12904497 12904799 -127411966 - AluSp SINE Alu -10 303 1 2118 100 3 0 chr10 12904949 12905249 -127411516 + AluSx SINE Alu 1 301 -11 1969 121 3 47 chr10 12905842 12906164 -127410601 - AluSg SINE Alu 0 310 3 180 0 0 0 chr10 12906173 12906193 -127410572 + (T)n Simple_repeat Simple_repeat 1 20 0 2181 85 7 3 chr10 12906544 12906837 -127409928 - AluSc SINE Alu -15 294 1 334 201 262 17 chr10 12906928 12907067 -127409698 + MIR SINE MIR 2 165 -43 845 162 0 0 chr10 12907183 12907325 -127409440 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12907325 12907370 -127409395 + AT_rich Low_complexity Low_complexity 1 45 0 1793 122 37 0 chr10 12907378 12907649 -127409116 + AluSx SINE Alu 18 298 -14 2060 120 0 3 chr10 12907651 12907943 -127408822 + AluSg SINE Alu 2 292 -18 5676 76 60 30 chr10 12908068 12908870 -127407895 + LTR12 LTR ERV1 1 826 0 750 257 56 23 chr10 12909336 12909550 -127407215 + MIR SINE MIR 42 262 0 1481 184 50 0 chr10 12909559 12909837 -127406928 - AluJo SINE Alu -20 292 1 196 269 124 69 chr10 12909994 12910139 -127406626 - MIR SINE MIR -12 250 98 1403 166 0 91 chr10 12910247 12910554 -127406211 + AluJo SINE Alu 32 310 -2 2222 92 3 3 chr10 12910657 12910962 -127405803 - AluSc SINE Alu -4 305 1 306 109 0 22 chr10 12911308 12911354 -127405411 + Alu SINE Alu 1 45 -254 2187 102 0 3 chr10 12911501 12911806 -127404959 - AluSx SINE Alu -8 304 1 2168 93 0 0 chr10 12911818 12912107 -127404658 - AluSc SINE Alu -20 289 1 1874 117 0 8 chr10 12912639 12912905 -127403860 - AluSx SINE Alu -46 266 3 894 133 0 92 chr10 12912962 12913135 -127403630 - AluJo SINE Alu -63 249 93 1820 142 20 0 chr10 12913302 12913597 -127403168 - AluSx SINE Alu -11 301 1 639 188 0 55 chr10 12913611 12913777 -127402988 + FLAM_A SINE Alu 1 159 0 1329 225 58 41 chr10 12913848 12914201 -127402564 - L1ME LINE L1 -393 5771 5409 2131 114 0 3 chr10 12914201 12914500 -127402265 - AluSg SINE Alu -12 298 1 1329 225 58 41 chr10 12914500 12914559 -127402206 - L1ME LINE L1 -755 5409 5352 360 315 36 15 chr10 12914587 12914741 -127402024 - MIR SINE MIR -61 147 30 5328 111 18 45 chr10 12914969 12915414 -127401351 - L1PB1 LINE L1 0 6151 5695 1973 141 0 3 chr10 12915414 12915712 -127401053 - AluSx SINE Alu -15 297 1 5328 111 18 45 chr10 12915712 12916097 -127400668 - L1PB1 LINE L1 -456 5695 5301 10972 31 3 0 chr10 12916097 12918146 -127398619 - L1PA4 LINE L1 0 6155 4097 2240 68 0 35 chr10 12918149 12918460 -127398305 - AluY SINE Alu -9 302 3 5328 111 18 45 chr10 12918460 12918631 -127398134 - L1PB1 LINE L1 -852 5299 5229 1881 123 3 40 chr10 12918633 12918935 -127397830 - AluY SINE Alu -20 291 1 2137 86 0 63 chr10 12919466 12919781 -127396984 + AluSp SINE Alu 1 295 -18 2234 69 14 3 chr10 12920163 12920454 -127396311 + AluY SINE Alu 1 294 -17 2094 63 13 53 chr10 12920782 12921084 -127395681 + AluSg1 SINE Alu 1 290 -19 2170 94 7 0 chr10 12921460 12921746 -127395019 + AluSg SINE Alu 13 300 -10 1866 152 0 3 chr10 12921960 12922257 -127394508 + AluJb SINE Alu 1 296 -16 312 211 86 69 chr10 12922451 12922626 -127394139 - L1ME4a LINE L1 -50 6071 5894 2143 106 7 0 chr10 12922658 12922961 -127393804 - AluSg SINE Alu -1 309 5 2241 95 3 0 chr10 12922964 12923268 -127393497 - AluSp SINE Alu -8 305 1 2365 71 0 0 chr10 12923299 12923594 -127393171 - AluY SINE Alu -16 295 1 1185 89 6 0 chr10 12924224 12924382 -127392383 + AluSq SINE Alu 1 159 -154 2028 141 0 0 chr10 12924520 12924819 -127391946 - AluSx SINE Alu -13 299 1 1182 129 14 29 chr10 12924955 12925164 -127391601 + AluJo SINE Alu 87 292 -20 2081 97 21 0 chr10 12925394 12925683 -127391082 - AluSx SINE Alu -17 295 1 354 231 88 0 chr10 12925719 12925810 -127390955 - MER63 DNA MER1_type -86 750 26 1440 192 118 51 chr10 12925820 12926096 -127390669 - LOR1b LTR ERV1 0 461 205 2249 78 0 0 chr10 12926096 12926389 -127390376 - AluSc SINE Alu -16 293 1 2070 112 10 0 chr10 12926396 12926699 -127390066 - AluY SINE Alu -4 307 2 1440 192 118 51 chr10 12926699 12926846 -127389919 - LOR1b LTR ERV1 -261 200 1 1737 148 27 10 chr10 12927113 12927411 -127389354 + AluSx SINE Alu 1 303 -9 1962 142 0 19 chr10 12927990 12928306 -127388459 + AluSx SINE Alu 1 310 -2 781 158 0 50 chr10 12928340 12928479 -127388286 - FLAM_C SINE Alu -1 132 1 235 198 159 110 chr10 12928496 12928618 -127388147 + L1ME LINE L1 5635 5750 -371 1414 190 10 20 chr10 12928618 12928923 -127387842 + AluJo SINE Alu 1 302 -10 351 0 0 0 chr10 12928931 12928970 -127387795 + (CA)n Simple_repeat Simple_repeat 2 40 0 235 198 159 110 chr10 12928970 12929020 -127387745 + L1ME LINE L1 5756 5825 -296 2128 120 10 0 chr10 12929026 12929335 -127387430 + AluSx SINE Alu 1 312 0 443 200 14 186 chr10 12929520 12929601 -127387164 - MER45A DNA AcHobo -1405 176 151 1311 184 69 25 chr10 12929601 12929878 -127386887 + AluJo SINE Alu 1 289 -23 443 200 14 186 chr10 12929878 12930006 -127386759 - MER45A DNA AcHobo -1430 151 3 674 137 0 0 chr10 12931017 12931119 -127385646 - AluSx SINE Alu -20 290 189 836 147 15 0 chr10 12931121 12931257 -127385508 - AluSx SINE Alu -174 138 1 2612 27 0 0 chr10 12931428 12931728 -127385037 + AluY SINE Alu 1 300 -11 1973 110 27 3 chr10 12931976 12932268 -127384497 - AluSx SINE Alu -13 299 1 1517 166 14 20 chr10 12932597 12932892 -127383873 - AluJo SINE Alu -5 307 15 2116 92 0 32 chr10 12933170 12933485 -127383280 + AluY SINE Alu 1 305 -6 1859 114 52 0 chr10 12933495 12933784 -127382981 + AluSx SINE Alu 1 304 -8 1857 152 3 3 chr10 12934421 12934718 -127382047 - AluJo SINE Alu -15 297 1 330 263 60 88 chr10 12934794 12935011 -127381754 + MIR SINE MIR 52 262 0 2128 130 35 46 chr10 12935013 12935307 -127381458 + THE1B LTR MaLR 1 292 -72 2152 98 0 13 chr10 12935307 12935612 -127381153 - AluSc SINE Alu -8 301 1 2128 130 35 46 chr10 12935612 12935685 -127381080 + THE1B LTR MaLR 292 364 0 1895 152 0 7 chr10 12935799 12936096 -127380669 + AluSx SINE Alu 1 295 -17 405 129 0 0 chr10 12936539 12936609 -127380156 - AluSp/q SINE Alu -9 304 235 818 188 0 0 chr10 12936716 12936860 -127379905 + AluSg/x SINE Alu 159 302 -10 324 385 0 0 chr10 12937019 12937128 -127379637 + L2 LINE L2 3205 3313 0 2075 115 7 0 chr10 12937680 12937975 -127378790 + AluSx SINE Alu 7 303 -9 867 141 67 0 chr10 12937977 12938126 -127378639 - MER2 DNA MER2_type -65 280 122 1571 136 0 0 chr10 12938127 12938400 -127378365 + AluSx SINE Alu 42 314 0 1985 138 0 0 chr10 12938400 12938697 -127378068 + AluSx SINE Alu 1 297 -15 1041 68 0 0 chr10 12938697 12938830 -127377935 + AluY SINE Alu 1 133 -178 2020 110 10 0 chr10 12938831 12939131 -127377634 + AluSq SINE Alu 1 303 -10 23 0 0 0 chr10 12939416 12939439 -127377326 + AT_rich Low_complexity Low_complexity 1 23 0 1372 177 0 0 chr10 12939454 12939680 -127377085 + AluJb SINE Alu 14 239 -73 2229 95 3 3 chr10 12939681 12939985 -127376780 + AluSx SINE Alu 9 312 0 1807 156 0 0 chr10 12940156 12940438 -127376327 + AluSq SINE Alu 1 282 -31 1706 162 7 7 chr10 12940444 12940740 -127376025 + AluSx SINE Alu 1 296 -16 927 192 6 0 chr10 12940742 12940924 -127375841 + AluJb SINE Alu 130 312 0 1208 114 0 22 chr10 12941018 12941202 -127375563 - AluSg/x SINE Alu 0 312 133 1998 113 0 13 chr10 12941203 12941512 -127375253 - AluSp SINE Alu -8 305 1 613 228 0 0 chr10 12941806 12941929 -127374836 + FLAM_A SINE Alu 5 127 -6 182 167 21 42 chr10 12941950 12941998 -127374767 + L2 LINE L2 3041 3087 -226 2215 105 0 10 chr10 12942230 12942543 -127374222 + AluSx SINE Alu 3 312 0 2183 68 0 39 chr10 12942912 12943220 -127373545 + AluY SINE Alu 1 296 -15 2188 114 0 0 chr10 12943227 12943535 -127373230 + AluSx SINE Alu 1 308 -4 1788 133 12 62 chr10 12944633 12944957 -127371808 - AluJb SINE Alu -4 308 1 1254 184 92 26 chr10 12945652 12945924 -127370841 - AluSg SINE Alu -10 290 1 1254 128 0 20 chr10 12946266 12946461 -127370304 - AluSx SINE Alu -121 191 1 1190 178 0 0 chr10 12947849 12948062 -127368703 + AluSg/x SINE Alu 85 297 -15 817 175 0 7 chr10 12948069 12948212 -127368553 + L1PA15 LINE L1 6024 6165 0 1802 143 0 23 chr10 12948411 12948719 -127368046 - AluSx SINE Alu -11 301 1 300 135 54 68 chr10 12950083 12950157 -127366608 + L1MCa LINE L1 1992 2064 -4362 * 311 122 54 68 chr10 12950127 12950201 -127366564 + L1MCa LINE L1 1992 2064 -4362 28 0 0 0 chr10 12950201 12950229 -127366536 + AT_rich Low_complexity Low_complexity 1 28 0 473 269 70 75 chr10 12950337 12950668 -127366097 - L2 LINE L2 -24 3248 2920 1092 115 0 0 chr10 12950795 12950951 -127365814 - AluSx SINE Alu -32 280 125 951 114 0 0 chr10 12950990 12951122 -127365643 - AluSx SINE Alu -181 132 1 1497 161 8 0 chr10 12951126 12951374 -127365391 - AluJb SINE Alu -24 288 39 245 325 158 5 chr10 12952177 12952386 -127364379 + MIR SINE MIR 9 249 -13 27 0 0 0 chr10 12952594 12952621 -127364144 + AT_rich Low_complexity Low_complexity 1 27 0 210 167 0 0 chr10 12952863 12952899 -127363866 + A-rich Low_complexity Low_complexity 1 36 0 567 109 0 40 chr10 12952910 12953011 -127363754 - AluSp/q SINE Alu -2 311 215 353 194 30 0 chr10 12953113 12953180 -127363585 + Tigger5 DNA MER2_type 26 94 -2229 2034 129 0 6 chr10 12953180 12953491 -127363274 + AluY SINE Alu 1 309 -2 1967 206 55 122 chr10 12953539 12953908 -127362857 - L1ME1 LINE L1 -11 6155 5763 1925 137 6 10 chr10 12953908 12954221 -127362544 - AluSx SINE Alu 0 312 1 1967 206 55 122 chr10 12954221 12954235 -127362530 - L1ME1 LINE L1 -403 5763 5750 659 188 0 53 chr10 12954235 12954410 -127362355 + FLAM_A SINE Alu 1 168 0 1967 206 55 122 chr10 12954410 12954834 -127361931 - L1ME1 LINE L1 -416 5750 5398 2052 125 0 3 chr10 12954834 12955131 -127361634 - AluSx SINE Alu -12 300 5 1488 183 18 7 chr10 12955142 12955421 -127361344 + Tigger3(Golem) DNA MER2_type 2747 3028 -1 671 233 10 68 chr10 12955424 12955630 -127361135 - MIR SINE MIR -56 206 13 361 157 14 0 chr10 12955778 12955848 -127360917 - AluS SINE Alu -228 71 1 752 253 66 72 chr10 12955848 12956385 -127360380 - L1MEd LINE L1 -4823 1306 773 1973 142 3 0 chr10 12956433 12956742 -127360023 - AluSx SINE Alu -2 310 1 1883 126 28 0 chr10 12957096 12957382 -127359383 - AluSg SINE Alu -16 294 1 1274 189 8 12 chr10 12958248 12958507 -127358258 - L1MB3 LINE L1 -15 6168 5911 754 180 0 29 chr10 12958513 12958652 -127358113 + MER2 DNA MER2_type 1 135 -210 2276 68 0 40 chr10 12958652 12958976 -127357789 - AluY SINE Alu 0 311 1 3051 121 20 82 chr10 12958996 12959558 -127357207 + MER1A DNA MER1_type 1 527 0 1962 130 0 13 chr10 12960213 12960513 -127356252 - AluSx SINE Alu -16 296 1 346 93 0 0 chr10 12960823 12960866 -127355899 - AluJo SINE Alu -13 288 246 285 218 16 65 chr10 12960997 12961121 -127355644 + (CCCA)n Simple_repeat Simple_repeat 1 118 0 1376 187 11 26 chr10 12961283 12961556 -127355209 - AluJo SINE Alu -43 269 1 1972 114 13 35 chr10 12961556 12961873 -127354892 - AluSq SINE Alu -3 310 1 270 176 0 0 chr10 12962082 12962133 -127354632 + CT-rich Low_complexity Low_complexity 2 52 0 180 0 0 0 chr10 12962169 12962189 -127354576 + (T)n Simple_repeat Simple_repeat 1 20 0 1078 119 0 0 chr10 12962723 12962883 -127353882 - AluSc SINE Alu -18 291 132 1553 113 0 4 chr10 12962883 12963047 -127353718 - AluSc SINE Alu -11 298 134 2053 101 3 29 chr10 12963047 12963354 -127353411 - AluY SINE Alu -12 299 1 1553 113 0 4 chr10 12963354 12963420 -127353345 - AluSc SINE Alu -175 134 69 1480 176 43 0 chr10 12963553 12963832 -127352933 - L1MA8 LINE L1 -37 6254 5964 741 186 43 6 chr10 12963836 12963927 -127352838 - Looper DNA T2_type -120 1438 1337 182 37 37 0 chr10 12963927 12963954 -127352811 + (CA)n Simple_repeat Simple_repeat 2 29 0 741 186 43 6 chr10 12963954 12964023 -127352742 - Looper DNA T2_type -221 1337 1272 2349 79 0 0 chr10 12964025 12964328 -127352437 - AluY SINE Alu -8 303 1 196 320 13 13 chr10 12964519 12964594 -127352171 - MIR SINE MIR -140 122 48 1719 235 95 77 chr10 12964858 12965625 -127351140 - MER21B LTR ERV1 -71 792 12 38 18 0 18 chr10 12966038 12966064 -127350701 + AT_rich Low_complexity Low_complexity 1 26 -29 1018 127 51 19 chr10 12966064 12966222 -127350543 - FRAM SINE Alu 0 166 4 38 18 0 18 chr10 12966222 12966251 -127350514 + AT_rich Low_complexity Low_complexity 26 55 0 1190 214 71 0 chr10 12966270 12966522 -127350243 - MER21B LTR ERV1 -593 270 1 709 131 0 9 chr10 12966631 12966738 -127350027 + AluSq/x SINE Alu 2 107 -206 2229 109 0 6 chr10 12967110 12967423 -127349342 + AluSx SINE Alu 1 311 -1 477 253 81 93 chr10 12967566 12967646 -127349119 - MER102b DNA MER1_type -1088 340 261 480 274 79 0 chr10 12967646 12967810 -127348955 + MER69A DNA AcHobo 1 177 0 477 253 81 93 chr10 12967810 12967977 -127348788 - MER102b DNA MER1_type -1167 261 96 2125 120 3 0 chr10 12967977 12968276 -127348489 + AluSx SINE Alu 1 300 -12 477 253 81 93 chr10 12968276 12968371 -127348394 - MER102b DNA MER1_type -1332 96 1 2240 76 21 0 chr10 12969239 12969529 -127347236 - AluSx SINE Alu -16 296 1 326 281 70 83 chr10 12970807 12971035 -127345730 + L2 LINE L2 3047 3271 -1 481 222 44 37 chr10 12971110 12971245 -127345520 + Charlie8 DNA MER1_type 37 172 -2245 2032 211 135 40 chr10 12971294 12971705 -127345060 - Charlie2 DNA MER1_type -16 2846 2475 2224 100 0 0 chr10 12971705 12972006 -127344759 - AluSq SINE Alu -12 301 1 2032 211 135 40 chr10 12972006 12972352 -127344413 - Charlie2 DNA MER1_type -387 2475 2017 349 86 86 0 chr10 12972606 12972734 -127344031 + (TA)n Simple_repeat Simple_repeat 1 139 0 2165 87 7 10 chr10 12972853 12973152 -127343613 - AluSq SINE Alu -15 298 1 22 0 0 0 chr10 12973178 12973200 -127343565 + AT_rich Low_complexity Low_complexity 1 22 0 534 265 132 37 chr10 12973239 12973564 -127343201 - L1ME4a LINE L1 0 6121 5766 1551 162 9 58 chr10 12973587 12973915 -127342850 - AluJo SINE Alu 0 312 1 4305 185 82 21 chr10 12973966 12974026 -127342739 - L1MB8 LINE L1 0 6178 6123 2183 108 3 0 chr10 12974026 12974332 -127342433 + AluSq SINE Alu 1 307 -6 4305 185 82 21 chr10 12974332 12976054 -127340711 - L1MB8 LINE L1 -55 6123 4302 1583 111 13 0 chr10 12976183 12976418 -127340347 - L1PA15 LINE L1 -269 5896 5659 249 267 163 12 chr10 12976429 12976515 -127340250 - MIR SINE MIR -67 141 43 597 163 0 122 chr10 12976623 12976770 -127339995 + MLT2B1 LTR ERVL 131 259 -261 1407 124 0 0 chr10 12976770 12976972 -127339793 + AluSx SINE Alu 64 265 -47 815 110 0 24 chr10 12978856 12978983 -127337782 + AluJo/FLAM SINE Alu 1 124 -188 2322 85 0 7 chr10 12978985 12979292 -127337473 - AluSg SINE Alu -5 305 1 334 201 262 17 chr10 12979383 12979522 -127337243 + MIR SINE MIR 2 165 -43 845 162 0 0 chr10 12979638 12979780 -127336985 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12979780 12979825 -127336940 + AT_rich Low_complexity Low_complexity 1 45 0 1819 118 37 0 chr10 12979833 12980104 -127336661 + AluSx SINE Alu 18 298 -14 2060 120 0 3 chr10 12980106 12980398 -127336367 + AluSg SINE Alu 2 292 -18 5719 80 59 29 chr10 12980523 12981325 -127335440 + LTR12 LTR ERV1 1 826 0 1802 126 11 4 chr10 12981757 12982020 -127334745 - AluSx SINE Alu -47 265 1 2276 79 7 0 chr10 12982026 12982316 -127334449 - AluY SINE Alu -19 292 1 212 163 0 0 chr10 12982401 12982444 -127334321 + A-rich Low_complexity Low_complexity 1 43 0 2235 113 0 3 chr10 12982624 12982917 -127333848 - AluSx SINE Alu -20 292 1 270 187 37 8 chr10 12982975 12983044 -127333721 - L1MC/D LINE L1 -411 5759 5705 1816 168 10 7 chr10 12983491 12983788 -127332977 - AluJb SINE Alu -14 298 1 363 163 12 38 chr10 12983997 12984077 -127332688 - Tigger5 DNA MER2_type 0 2323 2246 894 161 74 0 chr10 12984078 12984240 -127332525 - AluSg/x SINE Alu -3 309 136 2169 98 0 0 chr10 12984243 12984518 -127332247 - AluSx SINE Alu 0 312 38 2317 87 0 35 chr10 12985781 12986091 -127330674 - AluSq SINE Alu -14 299 1 866 141 0 0 chr10 12986295 12986416 -127330349 - AluJb SINE Alu -10 302 182 577 294 162 5 chr10 12987473 12987670 -127329095 + MIR SINE MIR 33 260 -2 230 224 0 0 chr10 12987748 12987797 -127328968 + GA-rich Low_complexity Low_complexity 2 50 0 2222 102 16 13 chr10 12988287 12988592 -127328173 - AluSx SINE Alu -6 306 1 1743 155 3 25 chr10 12988826 12989110 -127327655 + AluJo SINE Alu 13 290 -22 197 263 0 79 chr10 12989545 12989621 -127327144 - L3 LINE CR1 -12 1565 1496 339 25 0 0 chr10 12990132 12990172 -127326593 + (CA)n Simple_repeat Simple_repeat 1 40 0 2305 100 3 0 chr10 12990458 12990758 -127326007 - AluY SINE Alu -10 301 1 1625 132 0 0 chr10 12992012 12992239 -127324526 - AluSg/x SINE Alu -2 308 82 2133 109 28 0 chr10 12992321 12992605 -127324160 - AluSx SINE Alu -20 292 1 2385 99 0 0 chr10 12993167 12993469 -127323296 - AluSx SINE Alu -10 302 1 369 143 43 0 chr10 12993728 12993798 -127322967 + AluJ/FLAM SINE Alu 1 73 -229 1671 188 10 10 chr10 12994160 12994463 -127322302 + AluJo SINE Alu 1 303 -9 345 319 46 80 chr10 12995051 12995591 -127321174 + L2 LINE L2 2226 2747 -567 1061 165 0 0 chr10 12995592 12995756 -127321009 + AluJb SINE Alu 137 300 -12 286 252 114 32 chr10 12995819 12995942 -127320823 - MER94 DNA DNA -1 133 1 358 313 99 42 chr10 12995981 12996199 -127320566 + L2 LINE L2 2865 3069 -244 2209 135 0 0 chr10 12996199 12996511 -127320254 - AluSx SINE Alu 0 312 1 358 313 99 42 chr10 12996511 12996717 -127320048 + L2 LINE L2 3069 3313 0 2231 110 7 0 chr10 12997173 12997474 -127319291 - AluSp SINE Alu -10 303 1 1631 146 11 40 chr10 12997479 12997645 -127319120 - AluJo SINE Alu -18 294 138 2085 141 0 0 chr10 12997645 12997944 -127318821 - AluSx SINE Alu -13 299 1 1631 146 11 40 chr10 12997944 12998052 -127318713 - AluJo SINE Alu -174 138 28 269 241 63 0 chr10 12998309 12998388 -127318377 - LTR33 LTR ERVL -304 217 134 2362 107 0 0 chr10 12998628 12998966 -127317799 - AluSg SINE Alu 0 338 1 1654 52 0 19 chr10 12998986 12999198 -127317567 - L1PA7 LINE L1 -7 6147 5940 252 391 38 11 chr10 12999395 12999656 -127317109 + L2 LINE L2 2521 2788 -526 1542 205 38 6 chr10 12999656 12999998 -127316767 + MLT1A1 LTR MaLR 1 353 -12 262 261 111 25 chr10 13000061 13000260 -127316505 + L2 LINE L2 2839 3054 -218 2353 121 0 0 chr10 13000294 13000600 -127316165 - AluSx SINE Alu -6 306 1 252 0 0 0 chr10 13001696 13001724 -127315041 + (ATG)n Simple_repeat Simple_repeat 2 29 0 2005 137 7 0 chr10 13001724 13002009 -127314756 - AluSx SINE Alu -25 287 1 23 0 0 0 chr10 13002039 13002062 -127314703 + AT_rich Low_complexity Low_complexity 1 23 0 398 188 10 0 chr10 13003377 13003473 -127313292 + (TGAA)n Simple_repeat Simple_repeat 2 98 0 671 189 6 17 chr10 13003485 13003665 -127313100 + (TGAA)n Simple_repeat Simple_repeat 3 180 0 959 170 0 0 chr10 13004946 13005093 -127311672 - FRAM SINE Alu -32 144 1 2356 98 6 16 chr10 13005891 13006207 -127310558 + AluSq SINE Alu 1 313 0 1183 214 30 24 chr10 13007783 13008078 -127308687 - MER68 LTR ERV1 -9 553 257 400 127 13 13 chr10 13008093 13008172 -127308593 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 2094 108 0 11 chr10 13008172 13008451 -127308314 - AluSx SINE Alu -36 276 1 2460 177 16 5 chr10 13008452 13008892 -127307873 - L1MC1 LINE L1 -9 6324 5880 1284 167 23 0 chr10 13008895 13009116 -127307649 - MER68 LTR ERV1 -294 268 43 2273 113 33 36 chr10 13010708 13011071 -127305694 - THE1B LTR MaLR -2 362 1 2312 97 0 19 chr10 13011235 13011543 -127305222 - AluSx SINE Alu -10 302 1 241 200 0 0 chr10 13011585 13011645 -127305120 + L1MA10 LINE L1 6110 6321 -13 209 300 75 25 chr10 13011659 13011739 -127305026 - L2 LINE L2 -36 3236 3153 408 288 72 8 chr10 13011757 13011882 -127304883 + MER39 LTR ERV1 1 133 -574 * 1011 204 177 14 chr10 13011859 13012153 -127304612 + MER39 LTR ERV1 260 601 -106 1610 156 11 7 chr10 13012153 13012423 -127304342 - AluJb SINE Alu -14 298 28 900 159 0 0 chr10 13013528 13013660 -127303105 - FRAM SINE Alu -27 149 18 339 324 0 0 chr10 13015834 13015942 -127300823 + (TG)n Simple_repeat Simple_repeat 1 108 0 207 375 62 8 chr10 13015948 13016076 -127300689 + L2 LINE L2 3179 3313 0 351 224 60 45 chr10 13016414 13016548 -127300217 + L1 LINE L1 3125 3260 -2886 2419 99 0 0 chr10 13017675 13017977 -127298788 + AluSq SINE Alu 11 312 -1 280 239 60 0 chr10 13018285 13018352 -127298413 + MIR SINE MIR 56 126 -136 397 332 68 10 chr10 13018556 13018761 -127298004 - MIR SINE MIR -26 236 20 217 270 32 0 chr10 13019169 13019232 -127297533 - L2 LINE L2 -1 3271 3207 722 241 77 19 chr10 13019309 13019516 -127297249 + MER20 DNA MER1_type 1 219 0 247 311 60 48 chr10 13020190 13020357 -127296408 - MIR SINE MIR -79 183 15 346 281 0 22 chr10 13020694 13020872 -127295893 + (TATG)n Simple_repeat Simple_repeat 1 174 0 1808 194 10 70 chr10 13021465 13021882 -127294883 - MLT2B2 LTR ERVL -121 394 3 222 37 0 0 chr10 13023073 13023100 -127293665 + (TCC)n Simple_repeat Simple_repeat 1 27 0 377 308 40 33 chr10 13023167 13023353 -127293412 + MIR SINE MIR 22 208 -54 2132 134 0 3 chr10 13023353 13023651 -127293114 + AluSx SINE Alu 1 297 -15 377 308 40 33 chr10 13023651 13023666 -127293099 + MIR SINE MIR 208 221 -41 2406 68 0 13 chr10 13023727 13024034 -127292731 - AluY SINE Alu -8 303 1 234 250 62 83 chr10 13024748 13024892 -127291873 + MER91A DNA MER1_type 56 196 0 302 319 26 17 chr10 13025180 13025296 -127291469 - MER5A DNA MER1_type -26 163 47 2410 181 30 8 chr10 13025429 13025898 -127290867 + L1MB3 LINE L1 5704 6182 -1 1816 167 0 14 chr10 13026681 13026975 -127289790 + AluJb SINE Alu 1 290 -22 2094 134 0 3 chr10 13027359 13027651 -127289114 + AluSx SINE Alu 11 301 -11 524 225 11 112 chr10 13028471 13028535 -127288230 + MER5B DNA MER1_type 1 70 -108 1868 170 0 31 chr10 13028535 13028853 -127287912 + AluJo SINE Alu 1 308 -4 524 225 11 112 chr10 13028853 13028966 -127287799 + MER5B DNA MER1_type 70 160 -18 267 256 68 60 chr10 13029185 13029302 -127287463 + MIR SINE MIR 119 236 -26 890 123 0 0 chr10 13029610 13029732 -127287033 - AluSg/x SINE Alu -10 302 181 1898 142 3 47 chr10 13030721 13031038 -127285727 + AluJb SINE Alu 1 303 -9 196 325 216 36 chr10 13031658 13031852 -127284913 - MIR SINE MIR -29 233 5 447 169 14 0 chr10 13032158 13032229 -127284536 + AluS SINE Alu 228 299 -13 2325 96 0 0 chr10 13032611 13032913 -127283852 + AluY SINE Alu 1 302 -9 232 169 0 72 chr10 13033343 13033426 -127283339 + T-rich Low_complexity Low_complexity 3 79 0 4385 78 7 26 chr10 13033860 13034032 -127282733 - MER41A LTR ERV1 0 554 380 2235 123 3 0 chr10 13034032 13034341 -127282424 - AluSq SINE Alu -3 310 1 4385 78 7 26 chr10 13034341 13034733 -127282032 - MER41A LTR ERV1 -174 380 1 5590 120 28 68 chr10 13034806 13035747 -127281018 - MER4D LTR ERV1 0 903 1 4445 89 4 0 chr10 13036508 13037060 -127279705 - MER41A LTR ERV1 0 554 1 2061 223 29 91 chr10 13037735 13038625 -127278140 + L1MC2 LINE L1 3817 4651 -1495 5108 198 51 13 chr10 13038642 13039851 -127276914 + L1MC2 LINE L1 5083 6335 -9 275 326 28 14 chr10 13040544 13040685 -127276080 + L1MEd LINE L1 1114 1256 -4863 2119 117 3 0 chr10 13041035 13041326 -127275439 + AluSx SINE Alu 1 292 -20 498 57 0 0 chr10 13042775 13042845 -127273920 + (TG)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr10 13043082 13043103 -127273662 + AT_rich Low_complexity Low_complexity 1 21 0 1978 192 86 8 chr10 13043419 13043814 -127272951 + MSTB LTR MaLR 1 426 0 1876 139 4 14 chr10 13043818 13044129 -127272636 - AluSx SINE Alu 0 312 5 196 318 45 0 chr10 13044341 13044407 -127272358 + L2 LINE L2 3245 3313 0 21 36 0 0 chr10 13045358 13045386 -127271379 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 13045417 13045439 -127271326 + AT_rich Low_complexity Low_complexity 1 22 0 1727 199 22 14 chr10 13045612 13045969 -127270796 - L1MC3 LINE L1 -21 7764 7405 2205 134 42 36 chr10 13045970 13046327 -127270438 - THE1B LTR MaLR -5 359 1 326 276 0 0 chr10 13047696 13047772 -127268993 + L2 LINE L2 3197 3272 0 229 333 111 11 chr10 13048281 13048371 -127268394 + MIR SINE MIR 43 141 -67 324 238 25 49 chr10 13048461 13048583 -127268182 + MER103 DNA DNA 37 155 -11 1812 160 66 119 chr10 13049674 13050162 -127266603 + MER4C LTR ERV1 4 465 0 1550 183 3 45 chr10 13050209 13050405 -127266360 - AluJb SINE Alu -12 300 97 1953 163 13 43 chr10 13050405 13050780 -127265985 + THE1B LTR MaLR 1 364 0 12024 100 24 1 chr10 13050781 13052324 -127264441 + THE1B-int LTR MaLR 2 1579 -1 2109 147 24 53 chr10 13052325 13052700 -127264065 + THE1B LTR MaLR 1 364 0 1550 183 3 45 chr10 13052700 13052810 -127263955 - AluJb SINE Alu -214 98 3 205 255 319 0 chr10 13054248 13054342 -127262423 - L2 LINE L2 0 3272 3149 1874 163 3 49 chr10 13055148 13055474 -127261291 + AluJb SINE Alu 1 311 -1 1082 306 47 26 chr10 13056715 13057237 -127259528 + L2 LINE L2 2557 3087 -226 1770 146 3 59 chr10 13057621 13057942 -127258823 - AluJo SINE Alu -9 303 1 2279 111 0 0 chr10 13058081 13058387 -127258378 - AluSx SINE Alu -6 306 1 1811 155 0 31 chr10 13059459 13059636 -127257129 - AluJo SINE Alu -5 307 143 2020 133 17 0 chr10 13059636 13059936 -127256829 - AluSg SINE Alu -5 305 1 1811 155 0 31 chr10 13059936 13060075 -127256690 - AluJo SINE Alu -169 143 1 2380 99 0 0 chr10 13060617 13060919 -127255846 + AluSc SINE Alu 1 302 -7 2291 102 0 7 chr10 13061363 13061668 -127255097 - AluSc SINE Alu -6 303 1 1083 139 0 24 chr10 13061897 13062063 -127254702 - FRAM SINE Alu -4 162 1 2112 143 0 7 chr10 13062334 13062641 -127254124 - AluSx SINE Alu -7 305 1 1970 133 28 88 chr10 13062912 13063311 -127253454 + THE1C LTR MaLR 1 375 0 2524 64 0 0 chr10 13063737 13064034 -127252731 + AluY SINE Alu 1 297 -14 2239 120 0 0 chr10 13064548 13064857 -127251908 - AluSx SINE Alu -3 309 1 221 292 103 0 chr10 13064965 13065081 -127251684 - MIR SINE MIR -69 139 19 197 138 0 0 chr10 13065205 13065234 -127251531 + MIR SINE MIR 118 146 -62 1685 166 0 28 chr10 13065238 13065368 -127251397 + AluJo SINE Alu 1 133 -179 1896 112 0 4 chr10 13065368 13065628 -127251137 + AluY SINE Alu 41 299 -12 1685 166 0 28 chr10 13065628 13065787 -127250978 + AluJo SINE Alu 133 282 -30 1956 155 0 0 chr10 13066359 13066655 -127250110 - AluSx SINE Alu -16 296 1 897 157 31 0 chr10 13067057 13067216 -127249549 - L1MD1 LINE L1 0 6242 6079 1685 173 0 26 chr10 13067257 13067564 -127249201 - AluJb SINE Alu -13 299 1 359 195 49 0 chr10 13069498 13069580 -127247185 - L1ME4a LINE L1 -79 6042 5957 2048 135 3 0 chr10 13069708 13070019 -127246746 - AluSx SINE Alu 0 312 1 231 114 0 0 chr10 13070112 13070147 -127246618 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 221 326 0 31 chr10 13070209 13070307 -127246458 + CT-rich Low_complexity Low_complexity 3 97 0 2220 124 0 9 chr10 13070941 13071256 -127245509 + AluJo SINE Alu 1 312 0 2275 95 10 0 chr10 13071718 13072013 -127244752 - AluSx SINE Alu -14 298 1 1115 111 52 0 chr10 13072487 13072640 -127244125 + AluSg/x SINE Alu 135 295 -15 731 265 57 5 chr10 13072647 13072858 -127243907 - MIR SINE MIR 0 262 41 2212 84 30 7 chr10 13073388 13073685 -127243080 - AluY SINE Alu -7 304 1 273 77 0 39 chr10 13073710 13073762 -127243003 - L1MB4 LINE L1 -3 6177 6128 3671 118 11 13 chr10 13073784 13074333 -127242432 - L1PA13 LINE L1 0 6163 5616 2875 166 4 4 chr10 13074334 13074829 -127241936 - L1MB3 LINE L1 -41 6142 5648 2255 98 0 3 chr10 13075204 13075499 -127241266 + AluSg SINE Alu 1 294 -16 2172 104 3 0 chr10 13076327 13076614 -127240151 + AluSx SINE Alu 1 288 -24 526 290 97 6 chr10 13078248 13078424 -127238341 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 13078636 13078726 -127238039 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 13079001 13079053 -127237712 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 351 50 50 chr10 13079207 13079466 -127237299 + L2 LINE L2 2990 3248 -24 192 77 0 0 chr10 13079652 13079678 -127237087 + (AGGGGG)n Simple_repeat Simple_repeat 1 26 0 2983 236 76 25 chr10 13079678 13080898 -127235867 - L1MDa LINE L1 -2845 3695 2417 7153 55 37 14 chr10 13080900 13082447 -127234318 - SVA Other Other -739 1386 1 238 33 0 0 chr10 13082545 13082575 -127234190 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1321 87 54 5 chr10 13082575 13082760 -127234005 - AluY SINE Alu -1 310 88 1089 200 30 16 chr10 13082867 13083131 -127233634 - MER61B LTR ERV1 -64 361 1 12227 116 18 6 chr10 13083131 13085141 -127231624 - MER61B-int LTR ERV1 0 5217 3111 1087 227 33 3 chr10 13085632 13085936 -127230829 + MER33 DNA MER1_type 10 322 -2 21 36 0 0 chr10 13086058 13086086 -127230679 + AT_rich Low_complexity Low_complexity 1 28 0 1883 125 7 18 chr10 13086260 13086569 -127230196 + AluSx SINE Alu 4 309 0 188 284 149 0 chr10 13086838 13086912 -127229853 - L2 LINE L2 -287 2985 2901 26 0 0 0 chr10 13087420 13087446 -127229319 + AT_rich Low_complexity Low_complexity 1 26 0 246 62 0 0 chr10 13088067 13088099 -127228666 + (CA)n Simple_repeat Simple_repeat 1 32 0 311 294 40 16 chr10 13088108 13088234 -127228531 - L1MC4 LINE L1 -1339 6703 6575 250 206 43 11 chr10 13088234 13088326 -127228439 + (TA)n Simple_repeat Simple_repeat 2 96 0 2416 76 0 0 chr10 13088489 13088792 -127227973 - AluY SINE Alu -8 303 1 186 307 59 72 chr10 13089635 13089788 -127226977 - MIR3 SINE MIR -28 180 30 209 89 44 22 chr10 13089945 13089990 -127226775 + (TA)n Simple_repeat Simple_repeat 1 46 0 353 300 123 0 chr10 13090103 13090233 -127226532 + MIR SINE MIR 8 153 -109 2185 204 17 14 chr10 13090236 13090823 -127225942 + L1M4 LINE L1 4812 5400 -746 1618 127 0 0 chr10 13090825 13091045 -127225720 + AluSx SINE Alu 38 257 -55 424 152 65 11 chr10 13091175 13091267 -127225498 - MER61B-int LTR ERV1 -4714 503 407 783 148 107 31 chr10 13091278 13091474 -127225291 - MER61B-int LTR ERV1 -4763 454 244 1073 216 98 34 chr10 13091804 13092100 -127224665 - MER61B LTR ERV1 -28 396 1 1782 173 60 41 chr10 13093507 13093923 -127222842 - MER61C LTR ERV1 -10 424 1 274 330 121 12 chr10 13093927 13094100 -127222665 + MIR SINE MIR 31 222 -40 425 240 33 60 chr10 13094344 13094494 -127222271 + L2 LINE L2 3153 3298 -15 25 31 0 0 chr10 13094504 13094536 -127222229 + AT_rich Low_complexity Low_complexity 1 32 0 229 204 0 0 chr10 13094551 13094605 -127222160 + L1 LINE L1 2407 2460 -3686 195 42 0 0 chr10 13095078 13095102 -127221663 + (T)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr10 13095595 13095632 -127221133 + AT_rich Low_complexity Low_complexity 1 37 0 311 250 9 69 chr10 13095721 13095837 -127220928 + MIR SINE MIR 82 190 -72 26 0 0 0 chr10 13096651 13096677 -127220088 + AT_rich Low_complexity Low_complexity 1 26 0 1796 204 0 10 chr10 13096997 13097310 -127219455 - AluJo SINE Alu -2 310 1 414 377 8 8 chr10 13097719 13097849 -127218916 - MER91A DNA MER1_type -66 130 1 1341 186 34 15 chr10 13098424 13098688 -127218077 + AluJb SINE Alu 34 302 -10 590 60 0 12 chr10 13098718 13098802 -127217963 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 183 335 110 35 chr10 13099313 13099486 -127217279 - L3 LINE CR1 -1132 445 260 2637 42 0 3 chr10 13100574 13100883 -127215882 - AluY SINE Alu -3 308 1 2376 90 0 0 chr10 13100883 13101183 -127215582 - AluSg SINE Alu -10 300 1 724 164 41 7 chr10 13101183 13101329 -127215436 - L1MB3 LINE L1 -352 5831 5681 573 281 176 31 chr10 13101376 13101700 -127215065 - L3 LINE CR1 -598 979 609 2237 109 0 0 chr10 13101855 13102157 -127214608 - AluY SINE Alu -9 302 1 1866 159 3 3 chr10 13102166 13102455 -127214310 - AluJo SINE Alu -20 292 4 1796 158 0 7 chr10 13102890 13103169 -127213596 - AluJb SINE Alu -35 277 1 401 169 0 0 chr10 13103170 13103241 -127213524 - L1ME3 LINE L1 -178 5984 5914 527 201 101 22 chr10 13103252 13103431 -127213334 - L1ME3 LINE L1 -298 5864 5672 208 385 0 0 chr10 13103558 13103623 -127213142 - L3 LINE CR1 -1188 389 325 1391 120 57 0 chr10 13104277 13104486 -127212279 + AluJo SINE Alu 86 306 -6 444 284 8 8 chr10 13104522 13104656 -127212109 + L1MC/D LINE L1 5556 5689 -2119 1946 96 0 8 chr10 13104763 13105024 -127211741 - AluY SINE Alu -52 259 1 2240 219 50 23 chr10 13105024 13105223 -127211542 - L1ME1 LINE L1 -218 5948 5756 2219 118 0 0 chr10 13105223 13105520 -127211245 - AluSg1 SINE Alu -12 297 1 2240 219 50 23 chr10 13105520 13105985 -127210780 - L1ME1 LINE L1 -410 5756 5266 3723 232 43 41 chr10 13105986 13107264 -127209501 - L1ME1 LINE L1 -1482 4664 3384 917 213 64 0 chr10 13107284 13107486 -127209279 + MER58A DNA MER1_type 10 224 0 305 208 0 0 chr10 13107516 13107588 -127209177 - L1ME1 LINE L1 -2786 3360 3289 6454 61 19 21 chr10 13107600 13108458 -127208307 - SVA Other Other -1 1385 530 2518 177 29 38 chr10 13108601 13108649 -127208116 - L1MB3 LINE L1 -3 6180 6133 2037 138 0 41 chr10 13108649 13108967 -127207798 - AluJb SINE Alu -7 305 1 2518 177 29 38 chr10 13108967 13109056 -127207709 - L1MB3 LINE L1 -50 6133 6045 2232 123 0 0 chr10 13109056 13109358 -127207407 - AluSx SINE Alu -10 302 1 2518 177 29 38 chr10 13109358 13109779 -127206986 - L1MB3 LINE L1 -138 6045 5626 261 57 0 0 chr10 13110450 13110485 -127206280 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 652 174 9 0 chr10 13111340 13111455 -127205310 - FLAM_A SINE Alu -7 135 20 1916 121 82 0 chr10 13111465 13111746 -127205019 - AluJb SINE Alu -8 304 1 240 316 15 30 chr10 13111908 13112041 -127204724 + L1ME LINE L1 325 455 -5615 1213 249 122 71 chr10 13112111 13112324 -127204441 + L1ME LINE L1 448 649 -5431 1966 145 14 14 chr10 13112324 13112620 -127204145 + AluSx SINE Alu 1 296 -16 1213 249 122 71 chr10 13112620 13113657 -127203108 + L1ME LINE L1 649 1700 -4380 2393 75 0 0 chr10 13113663 13113956 -127202809 - AluY SINE Alu -18 293 1 2025 128 0 10 chr10 13114577 13114910 -127201855 + AluSx SINE Alu 1 330 0 246 320 0 0 chr10 13115282 13115385 -127201380 + A-rich Low_complexity Low_complexity 1 103 0 5103 122 13 10 chr10 13116037 13116909 -127199856 + L1PA13 LINE L1 5285 6163 0 591 328 66 26 chr10 13117092 13117394 -127199371 + HAL1 LINE L1 50 363 -2144 2180 102 3 0 chr10 13118277 13118562 -127198203 + AluSx SINE Alu 1 286 -26 30 0 0 0 chr10 13118562 13118592 -127198173 + AT_rich Low_complexity Low_complexity 1 30 0 284 172 0 16 chr10 13118829 13118893 -127197872 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 1405 248 45 45 chr10 13119144 13119649 -127197116 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr10 13119707 13119728 -127197037 + AT_rich Low_complexity Low_complexity 1 21 0 1899 208 36 8 chr10 13120088 13120473 -127196292 + MSTD LTR MaLR 1 396 0 1127 310 31 12 chr10 13120752 13121171 -127195594 + LTR16A LTR ERVL 15 441 -9 232 297 34 61 chr10 13122197 13122345 -127194420 + MIR SINE MIR 88 231 -31 11693 150 60 12 chr10 13122784 13124987 -127191778 - Tigger1 DNA MER2_type -1 2417 110 1733 134 4 36 chr10 13126639 13126915 -127189850 + AluSx SINE Alu 43 309 -3 2317 87 0 0 chr10 13126958 13127256 -127189509 + AluSg SINE Alu 1 298 -12 3498 21 5 5 chr10 13127989 13128410 -127188355 + L1PA4 LINE L1 5735 6155 0 204 40 0 0 chr10 13129095 13129120 -127187645 + (TC)n Simple_repeat Simple_repeat 1 25 0 202 255 0 20 chr10 13129800 13129851 -127186914 + MIR SINE MIR 156 205 -57 515 185 247 18 chr10 13130139 13130366 -127186399 - L1ME4a LINE L1 -2 6537 6259 191 61 30 0 chr10 13130374 13130407 -127186358 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1481 157 34 75 chr10 13130415 13130709 -127186056 - AluJo SINE Alu -30 282 1 1839 113 0 45 chr10 13130719 13131010 -127185755 - AluSx SINE Alu 0 312 35 2294 122 25 0 chr10 13131306 13131660 -127185105 + THE1B LTR MaLR 1 363 -1 454 266 22 45 chr10 13132175 13132397 -127184368 - L1MC5 LINE L1 -728 7233 7017 1218 232 24 7 chr10 13132441 13132738 -127184027 - MLT1F1 LTR MaLR -3 564 263 410 296 143 36 chr10 13132858 13133629 -127183136 - HAL1 LINE L1 -940 1567 715 253 203 145 0 chr10 13134053 13134122 -127182643 - HAL1 LINE L1 -2305 202 124 1207 184 88 42 chr10 13134185 13134539 -127182226 + MLT1B LTR MaLR 21 390 0 24 53 0 0 chr10 13134619 13134657 -127182108 + AT_rich Low_complexity Low_complexity 1 38 0 1973 254 63 7 chr10 13135388 13136687 -127180078 - L1ME4a LINE L1 -743 5821 4727 285 246 42 0 chr10 13136719 13136837 -127179928 - L1ME4a LINE L1 -2989 3575 3453 1031 212 63 27 chr10 13136846 13137549 -127179216 - L1MCa LINE L1 -4499 2065 1090 945 152 40 25 chr10 13137549 13137747 -127179018 + LTR54 LTR ERV1 1 201 -309 1352 263 71 77 chr10 13137747 13138589 -127178176 - L1MCa LINE L1 -5072 973 137 23 0 0 0 chr10 13139540 13139563 -127177202 + AT_rich Low_complexity Low_complexity 1 23 0 231 301 81 23 chr10 13140406 13140579 -127176186 + MER34 LTR ERV1 355 537 -5 389 242 43 56 chr10 13140785 13140946 -127175819 - MER110-int LTR ERV1 -1794 2853 2695 725 130 9 9 chr10 13141014 13141129 -127175636 - AluSp/q SINE Alu -18 295 181 300 53 0 0 chr10 13141256 13141294 -127175471 + (CA)n Simple_repeat Simple_repeat 2 39 0 1085 229 123 13 chr10 13141484 13141859 -127174906 - MER63B DNA MER1_type 0 436 21 236 332 68 68 chr10 13142103 13142305 -127174460 + L3 LINE CR1 398 599 -978 670 199 80 11 chr10 13142305 13142481 -127174284 - MER5A DNA MER1_type -1 188 1 236 332 68 68 chr10 13142481 13142721 -127174044 + L3 LINE CR1 598 840 -737 245 349 47 16 chr10 13143706 13143835 -127172930 - L2 LINE L2 -39 3274 3142 312 24 0 0 chr10 13143965 13144007 -127172758 + L1P LINE L1 4320 4361 -1785 2204 134 8 0 chr10 13144113 13144472 -127172293 - L1P4 LINE L1 -348 5817 5456 2261 94 10 3 chr10 13144475 13144782 -127171983 - AluSc SINE Alu 0 309 1 9282 238 21 12 chr10 13144791 13147421 -127169344 - L1P LINE L1 -1511 4635 1981 1094 210 94 5 chr10 13147676 13148172 -127168593 - L1ME LINE L1 -649 5517 4985 2569 46 9 9 chr10 13148173 13148500 -127168265 - L1PA5 LINE L1 -4 6150 5824 1865 43 0 0 chr10 13148502 13148736 -127168029 + L1PA5 LINE L1 5565 5798 -356 263 206 16 16 chr10 13148773 13148836 -127167929 + CT-rich Low_complexity Low_complexity 1 63 0 791 256 0 0 chr10 13148836 13149051 -127167714 - L1ME LINE L1 -1199 4947 4733 * 901 309 47 25 chr10 13149049 13149564 -127167201 + L1M4 LINE L1 108 633 -5763 370 208 56 8 chr10 13149560 13149685 -127167080 + L1M4 LINE L1 3244 3374 -2772 * 307 257 106 80 chr10 13149687 13149998 -127166767 + L1M4 LINE L1 3031 3349 -2866 310 50 0 0 chr10 13150044 13150084 -127166681 + L1P2 LINE L1 5694 5733 -421 491 337 11 0 chr10 13150193 13150383 -127166382 - L1M3d LINE L1 -5012 879 688 216 0 0 0 chr10 13150441 13150465 -127166300 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1569 291 31 26 chr10 13150482 13151168 -127165597 - L1M3d LINE L1 -5379 512 3 1816 222 56 14 chr10 13151171 13151250 -127165515 + L1M4 LINE L1 4746 4820 -1433 4854 86 41 5 chr10 13151250 13151914 -127164851 - LTR12 LTR ERV1 0 688 1 1816 222 56 14 chr10 13151914 13152303 -127164462 + L1M4 LINE L1 4820 5260 -993 201 74 0 0 chr10 13152303 13152330 -127164435 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1816 222 56 14 chr10 13152330 13152625 -127164140 + L1M4 LINE L1 5260 5541 -712 1099 194 69 113 chr10 13153431 13153714 -127163051 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 13153714 13153759 -127163006 + (TG)n Simple_repeat Simple_repeat 2 46 0 1099 194 69 113 chr10 13153759 13154042 -127162723 + MER34 LTR ERV1 248 542 0 425 225 183 6 chr10 13155062 13155231 -127161534 + HAL1 LINE L1 2309 2507 0 218 232 89 18 chr10 13155337 13155393 -127161372 - L2 LINE L2 -8 3305 3246 191 345 0 0 chr10 13157554 13157612 -127159153 + L2 LINE L2 3205 3262 -10 567 229 3 10 chr10 13158611 13158751 -127158014 + L1MA9 LINE L1 6130 6261 -30 569 122 10 0 chr10 13158757 13158855 -127157910 + L1MA9 LINE L1 6214 6312 0 1968 131 25 0 chr10 13158866 13159149 -127157616 + AluSx SINE Alu 1 290 -22 478 150 30 0 chr10 13159235 13159335 -127157430 + GA-rich Low_complexity Low_complexity 3 105 0 192 40 0 0 chr10 13160909 13160934 -127155831 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 67 0 0 chr10 13161413 13161458 -127155307 + AT_rich Low_complexity Low_complexity 1 45 0 314 245 43 12 chr10 13161549 13161712 -127155053 + (TA)n Simple_repeat Simple_repeat 2 169 0 1976 113 62 0 chr10 13161736 13162010 -127154755 - AluSg SINE Alu -19 291 1 318 120 0 0 chr10 13162010 13162060 -127154705 - L1MB3 LINE L1 -41 6142 6093 28 107 0 0 chr10 13162511 13162623 -127154142 + AT_rich Low_complexity Low_complexity 1 112 0 28 0 0 0 chr10 13163606 13163634 -127153131 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 13164027 13164050 -127152715 + AT_rich Low_complexity Low_complexity 1 23 0 220 277 0 32 chr10 13164113 13164207 -127152558 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 32 43 0 0 chr10 13164559 13164605 -127152160 + AT_rich Low_complexity Low_complexity 1 46 0 2079 110 7 10 chr10 13166160 13166452 -127150313 + AluSx SINE Alu 1 291 -21 2027 122 0 13 chr10 13166462 13166765 -127150000 + AluSx SINE Alu 1 299 -13 1654 152 22 14 chr10 13167342 13167619 -127149146 + AluJb SINE Alu 13 291 -21 387 0 0 0 chr10 13167619 13167662 -127149103 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 2235 107 10 3 chr10 13167845 13168153 -127148612 + AluSg SINE Alu 1 310 0 1605 156 7 68 chr10 13169275 13169583 -127147182 + AluJo SINE Alu 1 289 -23 317 209 0 0 chr10 13170351 13170418 -127146347 + L1MC/D LINE L1 5710 5776 -2032 632 110 11 0 chr10 13170438 13170529 -127146236 + AluJ/FLAM SINE Alu 1 92 -220 183 80 0 0 chr10 13170594 13170619 -127146146 + (T)n Simple_repeat Simple_repeat 1 25 0 239 237 0 13 chr10 13171909 13171985 -127144780 + L1M3 LINE L1 5367 5441 -730 2361 99 0 0 chr10 13172133 13172436 -127144329 + AluSx SINE Alu 1 303 -9 2018 116 0 0 chr10 13172932 13173232 -127143533 + AluSx SINE Alu 7 306 0 290 179 32 98 chr10 13173277 13173400 -127143365 + L1MC4 LINE L1 7811 8033 -9 246 225 65 87 chr10 13173519 13173657 -127143108 + MIR SINE MIR 58 192 -70 1006 238 110 14 chr10 13174472 13174837 -127141928 + MLT1J2 LTR MaLR 14 413 -37 2252 97 3 0 chr10 13174838 13175127 -127141638 + AluSx SINE Alu 1 290 -22 1126 96 0 0 chr10 13175127 13175273 -127141492 + AluSg/x SINE Alu 134 279 -33 504 48 0 0 chr10 13175293 13175356 -127141409 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 443 296 11 48 chr10 13175556 13175745 -127141020 + MLT1J LTR MaLR 257 438 -73 4057 90 47 7 chr10 13176275 13176895 -127139870 - L1MA2 LINE L1 0 6304 5660 2770 19 0 0 chr10 13176925 13177232 -127139533 + AluYa5 SINE Alu 1 307 -4 22 56 0 0 chr10 13177339 13177375 -127139390 + AT_rich Low_complexity Low_complexity 1 36 0 2256 110 3 3 chr10 13178432 13178732 -127138033 - AluSx SINE Alu -12 300 1 502 263 105 0 chr10 13179028 13179180 -127137585 - MIR3 SINE MIR 0 208 41 189 311 33 33 chr10 13180199 13180289 -127136476 + MIR SINE MIR 91 180 -82 742 162 0 0 chr10 13180372 13180483 -127136282 + AluJo/FLAM SINE Alu 4 114 -198 288 149 0 0 chr10 13180484 13180531 -127136234 + AluJb SINE Alu 68 114 -188 1536 166 0 0 chr10 13180532 13180773 -127135992 + AluJo SINE Alu 68 308 -4 190 162 54 0 chr10 13180786 13180823 -127135942 + MIR SINE MIR 101 139 -69 265 286 98 30 chr10 13180825 13180958 -127135807 + MIR3 SINE MIR 67 208 0 763 271 72 0 chr10 13181270 13181506 -127135259 + MIR SINE MIR 4 256 -6 2051 98 0 66 chr10 13181836 13182153 -127134612 + AluSx SINE Alu 3 298 -14 689 169 8 0 chr10 13182153 13182271 -127134494 + Charlie3 DNA MER1_type 2584 2702 -8 2288 90 0 3 chr10 13183153 13183442 -127133323 - AluSx SINE Alu -24 288 1 425 254 103 67 chr10 13183971 13184195 -127132570 + MIR SINE MIR 20 251 -11 301 298 23 57 chr10 13184207 13184382 -127132383 - MIR SINE MIR -68 140 9 243 170 0 0 chr10 13184531 13184578 -127132187 + CT-rich Low_complexity Low_complexity 5 51 0 2030 98 11 0 chr10 13184578 13184855 -127131910 - AluSx SINE Alu -32 280 1 1415 175 20 33 chr10 13184941 13185244 -127131521 - AluJo SINE Alu -13 299 1 562 317 118 48 chr10 13186675 13187655 -127129110 - L2 LINE L2 0 3272 2218 2371 76 0 10 chr10 13187668 13187982 -127128783 + AluY SINE Alu 1 311 0 1803 157 3 0 chr10 13188678 13188964 -127127801 + AluSq SINE Alu 6 292 -21 454 167 25 142 chr10 13189355 13189419 -127127346 + MER5B DNA MER1_type 1 46 -132 1343 176 93 17 chr10 13189419 13189709 -127127056 + AluJo SINE Alu 1 312 0 454 167 25 142 chr10 13189709 13189764 -127127001 + MER5B DNA MER1_type 46 106 -72 2245 100 0 0 chr10 13190670 13190979 -127125786 + AluSq SINE Alu 3 311 -2 2193 78 0 14 chr10 13191302 13191598 -127125167 - AluY SINE Alu -3 308 17 1226 224 68 36 chr10 13192427 13192811 -127123954 - MSTD LTR MaLR 0 396 1 1062 192 63 1 chr10 13193370 13193603 -127123162 - MLT2B1 LTR ERVL 0 520 223 896 200 6 0 chr10 13193605 13193775 -127122990 + FRAM SINE Alu 1 170 -6 1264 138 14 32 chr10 13193775 13193993 -127122772 - MLT2B2 LTR ERVL -297 218 5 413 36 18 0 chr10 13194063 13194118 -127122647 + (GA)n Simple_repeat Simple_repeat 1 56 0 231 159 45 0 chr10 13194312 13194356 -127122409 - MER66B LTR ERV1 -149 337 292 224 236 0 0 chr10 13194357 13194412 -127122353 + T-rich Low_complexity Low_complexity 1 55 0 2365 51 0 41 chr10 13195200 13195515 -127121250 + AluY SINE Alu 5 306 -5 23 0 0 53 chr10 13195674 13195690 -127121075 + AT_rich Low_complexity Low_complexity 1 16 -20 2143 98 0 0 chr10 13195690 13195977 -127120788 + AluSg SINE Alu 1 287 -23 23 0 0 53 chr10 13195977 13195998 -127120767 + AT_rich Low_complexity Low_complexity 16 36 0 2267 99 0 3 chr10 13196167 13196471 -127120294 + AluSq SINE Alu 1 303 -10 1251 169 60 4 chr10 13196484 13196733 -127120032 + AluSx SINE Alu 32 294 -18 384 188 7 104 chr10 13196865 13196935 -127119830 + MER5A DNA MER1_type 4 57 -132 2040 110 0 28 chr10 13196935 13197254 -127119511 + AluSg SINE Alu 1 310 0 384 188 7 104 chr10 13197254 13197300 -127119465 + MER5A DNA MER1_type 57 106 -83 296 398 31 0 chr10 13197463 13197591 -127119174 + L2 LINE L2 3119 3250 -22 1098 147 107 13 chr10 13197910 13198134 -127118631 + THE1C LTR MaLR 1 245 -130 1663 153 13 23 chr10 13198383 13198691 -127118074 - AluJo SINE Alu -7 305 1 1453 162 21 79 chr10 13199367 13199739 -127117026 - AluJo SINE Alu 0 354 2 191 316 55 104 chr10 13199771 13200055 -127116710 + L2 LINE L2 1792 2060 -1254 1872 140 0 52 chr10 13200055 13200383 -127116382 - AluSx SINE Alu -1 311 1 191 316 55 104 chr10 13200383 13200424 -127116341 + L2 LINE L2 2060 2101 -1213 2268 145 51 17 chr10 13200424 13200837 -127115928 - MSTA LTR MaLR -1 427 1 2148 123 0 0 chr10 13200846 13201156 -127115609 - AluSg SINE Alu 0 310 1 1323 248 174 2 chr10 13201314 13201774 -127114991 + Charlie7 DNA MER1_type 1 539 -2073 444 227 75 64 chr10 13201794 13202089 -127114676 + Charlie7 DNA MER1_type 2314 2611 -1 2781 132 6 9 chr10 13202098 13202554 -127114211 - MER1A DNA MER1_type 0 529 30 369 274 33 112 chr10 13203723 13203836 -127112929 - MIR SINE MIR -8 254 164 1583 157 0 60 chr10 13203836 13204029 -127112736 - AluJo SINE Alu -8 304 136 2176 65 3 78 chr10 13204029 13204351 -127112414 + AluSp SINE Alu 1 298 -15 1583 157 0 60 chr10 13204351 13204475 -127112290 - AluJo SINE Alu -176 136 6 369 274 33 112 chr10 13204475 13204576 -127112189 - MIR SINE MIR -98 164 57 186 43 0 0 chr10 13205055 13205078 -127111687 + (TTTCC)n Simple_repeat Simple_repeat 4 26 0 180 0 0 0 chr10 13206104 13206124 -127110641 + (T)n Simple_repeat Simple_repeat 1 20 0 703 76 0 50 chr10 13206662 13206781 -127109984 - L1PB1 LINE L1 -3 6148 6036 495 296 40 25 chr10 13208081 13208280 -127108485 + MIR3 SINE MIR 1 202 -6 537 268 155 5 chr10 13208603 13208797 -127107968 - MIR SINE MIR -4 258 36 378 258 96 36 chr10 13208981 13209148 -127107617 + MIR SINE MIR 36 212 -50 1979 134 3 3 chr10 13209242 13209549 -127107216 + AluSx SINE Alu 2 308 -4 343 203 29 0 chr10 13210075 13210144 -127106621 - Tigger7 DNA MER2_type 0 2487 2417 1253 167 8 72 chr10 13210162 13210413 -127106352 - Tigger7 DNA MER2_type -2220 267 33 1559 158 3 91 chr10 13210491 13210821 -127105944 + AluJb SINE Alu 1 301 -11 201 240 144 48 chr10 13211868 13212014 -127104751 + MIR SINE MIR 91 250 -12 528 137 0 0 chr10 13212910 13212983 -127103782 + AluS SINE Alu 2 74 -239 847 176 85 6 chr10 13214020 13214196 -127102569 + MIR SINE MIR 31 220 -42 219 314 177 8 chr10 13214429 13214553 -127102212 - L2 LINE L2 -2 3311 3167 1575 206 41 16 chr10 13216458 13216822 -127099943 - MLT1A2 LTR MaLR 0 374 2 1428 92 0 5 chr10 13217135 13217330 -127099435 - AluSq SINE Alu -20 293 100 275 148 0 16 chr10 13218627 13218688 -127098077 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 3570 261 44 37 chr10 13220755 13220895 -127095870 + L2 LINE L2 1562 1700 -1614 248 0 0 30 chr10 13220895 13220928 -127095837 + (CAAAC)n Simple_repeat Simple_repeat 3 34 0 3570 261 44 37 chr10 13220928 13222002 -127094763 + L2 LINE L2 1700 2784 -530 503 255 78 31 chr10 13223042 13223234 -127093531 - MIR SINE MIR -59 203 3 212 204 23 0 chr10 13223272 13223316 -127093449 + L2 LINE L2 3226 3270 -2 476 289 64 13 chr10 13223340 13223496 -127093269 - MIR SINE MIR -18 244 81 807 148 22 15 chr10 13223503 13223638 -127093127 - AluJb SINE Alu -18 294 159 1865 123 27 7 chr10 13223826 13224126 -127092639 + AluSx SINE Alu 1 306 -6 395 245 0 82 chr10 13224127 13224225 -127092540 + L1MC4 LINE L1 6614 6703 -1339 324 308 22 0 chr10 13224158 13224249 -127092516 - L1MC4 LINE L1 -1336 6706 6614 * 389 255 0 43 chr10 13224265 13224359 -127092406 + L1MC4 LINE L1 6614 6703 -1339 182 328 17 0 chr10 13224679 13224737 -127092028 + L2 LINE L2 3246 3304 -9 2166 114 0 3 chr10 13226267 13226573 -127090192 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr10 13226675 13226699 -127090066 + (TG)n Simple_repeat Simple_repeat 2 25 0 1917 206 51 2 chr10 13226716 13227149 -127089616 - L1MB1 LINE L1 -2 6166 5713 216 333 241 0 chr10 13227264 13227372 -127089393 + MIR SINE MIR 106 239 -23 195 125 18 54 chr10 13227417 13227473 -127089292 + CT-rich Low_complexity Low_complexity 3 56 0 270 136 0 0 chr10 13227587 13227631 -127089134 + (A)n Simple_repeat Simple_repeat 1 44 0 3368 168 20 54 chr10 13227752 13227981 -127088784 - L1MB7 LINE L1 -23 6161 5926 2058 112 10 0 chr10 13227981 13228277 -127088488 + AluSx SINE Alu 1 299 -13 3368 168 20 54 chr10 13228277 13228786 -127087979 - L1MB7 LINE L1 -258 5926 5448 410 206 22 0 chr10 13228862 13228954 -127087811 + AluJb SINE Alu 14 107 -205 796 159 0 23 chr10 13229276 13229408 -127087357 - FLAM_A SINE Alu -2 140 12 226 136 68 51 chr10 13229413 13229472 -127087293 - AluJo SINE Alu -160 142 83 1041 166 135 0 chr10 13230638 13230831 -127085934 + MER20 DNA MER1_type 1 219 0 2029 99 31 3 chr10 13232080 13232372 -127084393 + AluSx SINE Alu 1 300 -12 230 325 32 24 chr10 13233397 13233520 -127083245 - MIR3 SINE MIR -7 201 78 848 156 0 46 chr10 13233706 13233879 -127082886 + FRAM SINE Alu 2 166 -10 1204 72 63 5 chr10 13234326 13234533 -127082232 + AluSx SINE Alu 1 219 -93 285 105 0 0 chr10 13234649 13234687 -127082078 + Alu SINE Alu 255 292 -10 2387 230 61 8 chr10 13234718 13235357 -127081408 + L1M4 LINE L1 2366 3038 -3108 307 53 0 0 chr10 13236135 13236173 -127080592 + THE1A LTR MaLR 318 355 0 623 188 182 7 chr10 13236279 13236433 -127080332 + MER5A DNA MER1_type 7 187 -2 224 273 150 16 chr10 13236738 13236784 -127079981 + MIR SINE MIR 40 78 -169 1917 146 3 0 chr10 13236784 13237085 -127079680 - AluJb SINE Alu -10 302 1 224 273 150 16 chr10 13237085 13237163 -127079602 + MIR SINE MIR 78 182 -65 186 150 33 17 chr10 13237494 13237554 -127079211 + CT-rich Low_complexity Low_complexity 5 65 0 347 291 176 24 chr10 13237565 13237856 -127078909 - HAL1 LINE L1 -1230 1277 887 319 148 0 99 chr10 13237960 13238041 -127078724 + AluSx SINE Alu 229 301 0 644 250 14 24 chr10 13238525 13238705 -127078060 - MER5A DNA MER1_type -8 181 4 425 19 19 0 chr10 13240119 13240173 -127076592 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 1978 128 6 3 chr10 13242266 13242578 -127074187 - AluSq SINE Alu 0 313 1 1536 138 50 31 chr10 13242853 13243113 -127073652 - THE1B LTR MaLR -99 265 1 21 0 0 0 chr10 13243491 13243512 -127073253 + AT_rich Low_complexity Low_complexity 1 21 0 1074 106 0 0 chr10 13243626 13243777 -127072988 + AluSg/x SINE Alu 158 308 -4 2081 253 72 33 chr10 13244318 13244395 -127072370 + L1MDa LINE L1 21 94 -6446 201 74 0 0 chr10 13244395 13244422 -127072343 + (CA)n Simple_repeat Simple_repeat 2 28 0 2081 253 72 33 chr10 13244422 13245107 -127071658 + L1MDa LINE L1 94 1042 -5498 204 40 0 0 chr10 13245116 13245141 -127071624 + (CA)n Simple_repeat Simple_repeat 2 26 0 568 218 46 17 chr10 13245141 13245315 -127071450 + L1M4 LINE L1 4263 4441 -1705 302 135 27 54 chr10 13245325 13245399 -127071366 + L1M4 LINE L1 4377 4448 -1698 2293 216 59 52 chr10 13245401 13246175 -127070590 + L1M4 LINE L1 4377 5156 -990 289 103 0 0 chr10 13246639 13246678 -127070087 - MLT1K LTR MaLR -4 584 546 1911 132 4 0 chr10 13249352 13249656 -127067109 - AluSx SINE Alu 0 305 1 256 310 14 0 chr10 13250681 13250752 -127066013 - L2 LINE L2 -40 3232 3161 1073 119 5 60 chr10 13251877 13252062 -127064703 + AluSg/x SINE Alu 128 302 -10 274 261 43 22 chr10 13252599 13252691 -127064074 - MIR SINE MIR -92 170 77 2511 129 20 0 chr10 13253573 13253930 -127062835 + THE1B LTR MaLR 1 364 0 2172 110 0 0 chr10 13254260 13254560 -127062205 - AluSc SINE Alu -9 300 1 3422 69 0 2 chr10 13254586 13255023 -127061742 + L1PA10 LINE L1 5724 6159 -9 312 262 224 22 chr10 13255313 13255496 -127061269 + MLT1J LTR MaLR 292 511 0 1683 141 31 10 chr10 13255635 13255925 -127060840 + AluJb SINE Alu 1 296 -16 2058 110 3 23 chr10 13256888 13257197 -127059568 + AluSx SINE Alu 1 303 -9 183 80 0 0 chr10 13257323 13257348 -127059417 + (TG)n Simple_repeat Simple_repeat 2 26 0 2208 105 0 6 chr10 13257962 13258276 -127058489 + AluSx SINE Alu 1 312 0 1243 189 115 22 chr10 13259115 13259385 -127057380 - AluJo SINE Alu -17 295 1 2061 116 10 0 chr10 13259670 13259971 -127056794 + AluSx SINE Alu 1 304 -8 193 283 182 0 chr10 13260057 13260156 -127056609 - MIR SINE MIR -32 230 114 288 111 0 0 chr10 13260567 13260612 -127056153 + (CA)n Simple_repeat Simple_repeat 1 45 0 604 213 7 7 chr10 13260810 13260946 -127055819 - L1MA5 LINE L1 -4 6296 6161 1717 87 17 0 chr10 13260961 13261192 -127055573 - AluSx SINE Alu -77 235 1 318 188 78 0 chr10 13262112 13262176 -127054589 + Charlie3 DNA MER1_type 46 114 -2596 317 24 24 0 chr10 13262195 13262236 -127054529 - MER63 DNA MER1_type -888 42 1 411 323 62 12 chr10 13262243 13262404 -127054361 + L2 LINE L2 1859 2027 -1287 3658 104 11 33 chr10 13262453 13262521 -127054244 + MER1A DNA MER1_type 1 69 -2631 2166 93 0 10 chr10 13262521 13262832 -127053933 + AluY SINE Alu 1 308 -3 3658 104 11 33 chr10 13262832 13263302 -127053463 + MER1A DNA MER1_type 69 527 0 1325 158 0 0 chr10 13264519 13264734 -127052031 + L1PA13 LINE L1 5936 6150 -13 1065 150 0 18 chr10 13264799 13264966 -127051799 - FRAM SINE Alu -1 165 2 236 36 0 0 chr10 13265168 13265196 -127051569 - MLT2B2 LTR ERVL -10 505 478 222 91 0 0 chr10 13265196 13265229 -127051536 + (TG)n Simple_repeat Simple_repeat 1 33 0 2255 89 0 0 chr10 13265304 13265596 -127051169 + AluY SINE Alu 2 293 -18 1888 146 10 0 chr10 13267776 13268071 -127048694 + AluSx SINE Alu 1 298 -14 752 183 23 0 chr10 13268097 13268228 -127048537 + AluJo SINE Alu 2 135 -177 29 47 0 0 chr10 13268228 13268271 -127048494 + AT_rich Low_complexity Low_complexity 1 43 0 1812 131 4 0 chr10 13268281 13268549 -127048216 + AluJo SINE Alu 23 291 -21 22 0 0 0 chr10 13268549 13268571 -127048194 + AT_rich Low_complexity Low_complexity 1 22 0 4241 105 42 63 chr10 13269866 13269952 -127046813 - LTR8A LTR ERV1 0 727 641 2093 109 3 0 chr10 13269952 13270246 -127046519 + AluSg SINE Alu 1 295 -15 4241 105 42 63 chr10 13270246 13270902 -127045863 - LTR8A LTR ERV1 -86 641 1 755 324 15 8 chr10 13270983 13271242 -127045523 + MIR SINE MIR 2 262 0 2088 91 44 0 chr10 13271295 13271591 -127045174 - AluSg SINE Alu -1 309 1 451 220 30 0 chr10 13271841 13271941 -127044824 - MER97c DNA MER1_type? -931 159 57 545 241 20 89 chr10 13272182 13272264 -127044501 + MER5A DNA MER1_type 1 87 -102 2217 88 10 3 chr10 13272264 13272571 -127044194 + AluSq SINE Alu 1 309 -4 545 241 20 89 chr10 13272571 13272691 -127044074 + MER5A DNA MER1_type 87 189 0 378 326 28 7 chr10 13272701 13272845 -127043920 + MIR SINE MIR 97 243 -19 1247 168 97 22 chr10 13273175 13273443 -127043322 + AluJo SINE Alu 1 288 -24 2063 64 0 11 chr10 13273451 13273717 -127043048 + AluY SINE Alu 1 263 -48 459 288 50 45 chr10 13274047 13274269 -127042496 + MIR SINE MIR 40 262 0 386 308 117 40 chr10 13274740 13275013 -127041752 + MLT1J1 LTR MaLR 100 393 -53 589 82 20 20 chr10 13275558 13275656 -127041109 + AluSg/x SINE Alu 161 258 -52 180 125 0 0 chr10 13275970 13276002 -127040763 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 525 16 0 0 chr10 13276028 13276090 -127040675 + (TC)n Simple_repeat Simple_repeat 1 62 0 1050 214 20 12 chr10 13276835 13277083 -127039682 + AluJo SINE Alu 1 250 -62 497 258 65 73 chr10 13278351 13278599 -127038166 + MIR SINE MIR 5 250 -12 1244 321 141 12 chr10 13278675 13279394 -127037371 + L3 LINE CR1 63 873 -704 1890 90 8 0 chr10 13279399 13279665 -127037100 + AluY SINE Alu 1 268 -43 235 175 0 0 chr10 13280515 13280555 -127036210 + L2 LINE L2 3274 3313 0 1474 122 3 90 chr10 13281574 13281895 -127034870 + AluSq SINE Alu 1 293 -20 203 261 0 0 chr10 13282267 13282313 -127034452 + A-rich Low_complexity Low_complexity 3 48 0 270 220 68 0 chr10 13283077 13283136 -127033629 - MIR SINE MIR -71 191 129 266 377 37 33 chr10 13283149 13283343 -127033422 + L2 LINE L2 2620 2817 -497 4209 155 32 24 chr10 13283343 13284122 -127032643 - LTR1 LTR ERV1 0 785 1 266 377 37 33 chr10 13284122 13284171 -127032594 + L2 LINE L2 2817 2864 -450 188 314 10 49 chr10 13284276 13284378 -127032387 + L2 LINE L2 2998 3095 -177 2154 99 10 0 chr10 13284378 13284672 -127032093 - AluSx SINE Alu -15 297 1 482 136 37 12 chr10 13284854 13284935 -127031830 - MER105 DNA DNA -1 203 121 875 187 5 40 chr10 13285046 13285244 -127031521 + AluJb SINE Alu 119 309 -3 2190 125 3 0 chr10 13285391 13285687 -127031078 + AluSq SINE Alu 1 297 -16 186 350 10 20 chr10 13286161 13286261 -127030504 + MIR SINE MIR 164 262 0 193 269 0 0 chr10 13286404 13286456 -127030309 - L2 LINE L2 -218 3054 3003 3691 132 9 0 chr10 13286531 13287055 -127029710 - MER1A DNA MER1_type 0 529 1 414 316 35 12 chr10 13287095 13287266 -127029499 - L2 LINE L2 -1289 2025 1851 712 202 34 51 chr10 13287266 13287444 -127029321 + MER63B DNA MER1_type 1 175 -261 1407 209 16 32 chr10 13287813 13288020 -127028745 - MER82 DNA MER2_type -145 508 306 2421 111 16 14 chr10 13288020 13288391 -127028374 + THE1C LTR MaLR 1 372 -3 1407 209 16 32 chr10 13288391 13288498 -127028267 - MER82 DNA MER2_type -347 306 199 7143 122 12 35 chr10 13288500 13289599 -127027166 + HSMAR2 DNA Mariner 3 1077 -225 2142 90 21 0 chr10 13289599 13289888 -127026877 + AluSc SINE Alu 1 295 -14 7143 122 12 35 chr10 13289888 13289932 -127026833 + HSMAR2 DNA Mariner 1077 1120 -182 2062 127 0 0 chr10 13290434 13290741 -127026024 - AluSx SINE Alu 0 307 1 2116 82 7 41 chr10 13290882 13291199 -127025566 - AluSq SINE Alu 0 307 1 310 183 42 28 chr10 13291622 13291693 -127025072 - L1MC3 LINE L1 -607 7178 7107 357 110 0 122 chr10 13291849 13291901 -127024864 - MLT2C2 LTR ERVL -8 456 416 528 56 0 0 chr10 13291901 13291973 -127024792 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 357 110 0 122 chr10 13291973 13292002 -127024763 - MLT2C2 LTR ERVL -48 416 385 215 61 30 0 chr10 13292012 13292045 -127024720 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 462 308 30 21 chr10 13292047 13292281 -127024484 - HAL1 LINE L1 -864 1643 1408 418 72 78 24 chr10 13292370 13292536 -127024229 + (TA)n Simple_repeat Simple_repeat 1 175 0 462 73 104 9 chr10 13292555 13292981 -127023784 + (TA)n Simple_repeat Simple_repeat 1 466 0 377 300 52 47 chr10 13293112 13293173 -127023592 - MIR SINE MIR -56 206 147 1863 170 0 0 chr10 13293173 13293473 -127023292 - AluJo SINE Alu -12 300 1 377 300 52 47 chr10 13293473 13293604 -127023161 - MIR SINE MIR -115 147 16 2071 122 7 0 chr10 13293818 13294112 -127022653 - AluSx SINE Alu -11 301 6 198 0 0 0 chr10 13295029 13295051 -127021714 + (C)n Simple_repeat Simple_repeat 1 22 0 182 257 9 0 chr10 13295498 13295603 -127021162 + (CA)n Simple_repeat Simple_repeat 2 107 0 469 235 6 6 chr10 13295670 13295840 -127020925 + (CA)n Simple_repeat Simple_repeat 2 171 0 492 297 46 14 chr10 13296967 13297186 -127019579 - MIR SINE MIR -1 261 36 1545 112 9 9 chr10 13297496 13297720 -127019045 + AluSq SINE Alu 1 224 -89 511 289 129 4 chr10 13298791 13299023 -127017742 - MIR SINE MIR 0 262 2 2215 99 3 13 chr10 13299433 13299736 -127017029 - AluSc SINE Alu -9 300 1 2133 130 0 0 chr10 13299823 13300122 -127016643 + AluSx SINE Alu 1 299 -13 458 71 0 192 chr10 13300529 13300628 -127016137 + MADE1 DNA Mariner 1 80 0 5624 150 12 2 chr10 13300855 13302557 -127014208 - L1PB1 LINE L1 -161 5990 4270 764 114 9 9 chr10 13302759 13302873 -127013892 + FLAM_C SINE Alu 2 115 -18 2285 94 7 0 chr10 13303404 13303701 -127013064 - AluSc SINE Alu -10 299 1 1520 166 43 17 chr10 13304362 13304663 -127012102 + AluJo SINE Alu 1 309 -3 536 229 92 52 chr10 13305023 13305411 -127011354 + L1M4 LINE L1 4211 4582 -1564 1641 163 45 0 chr10 13305411 13305699 -127011066 + AluSq SINE Alu 1 301 -12 536 229 92 52 chr10 13305699 13305925 -127010840 + L1M4 LINE L1 4582 4798 -1348 2152 119 0 7 chr10 13305925 13306219 -127010546 + AluSx SINE Alu 1 292 -20 536 229 92 52 chr10 13306219 13306369 -127010396 + L1M4 LINE L1 4798 5192 -954 2374 94 0 3 chr10 13306381 13306690 -127010075 + AluSg SINE Alu 1 308 -2 1139 187 113 14 chr10 13306696 13306979 -127009786 - L1ME LINE L1 -426 5740 5430 427 182 26 0 chr10 13307027 13307104 -127009661 - L1MC2 LINE L1 -32 6312 6234 365 138 0 0 chr10 13307872 13307930 -127008835 + MER53 DNA DNA 9 66 -123 231 170 64 0 chr10 13308656 13308703 -127008062 - L2 LINE L2 0 3272 3223 378 282 147 6 chr10 13308980 13309143 -127007622 + MER5A DNA MER1_type 4 189 0 464 303 27 21 chr10 13309151 13309339 -127007426 - MER5A DNA MER1_type 0 189 1 189 0 0 0 chr10 13310370 13310391 -127006374 + (A)n Simple_repeat Simple_repeat 1 21 0 432 248 30 15 chr10 13310426 13310559 -127006206 + HAL1 LINE L1 2036 2170 -337 238 250 43 11 chr10 13310594 13310686 -127006079 + HAL1 LINE L1 2245 2339 -168 2440 92 3 0 chr10 13310695 13310999 -127005766 + AluSx SINE Alu 1 305 -7 1977 269 105 3 chr10 13311188 13311872 -127004893 + L2 LINE L2 2216 2969 -345 2226 101 0 3 chr10 13311876 13312199 -127004566 - AluSq SINE Alu 0 313 1 2420 73 3 13 chr10 13313558 13313871 -127002894 + AluY SINE Alu 1 310 -1 216 234 125 0 chr10 13313935 13313999 -127002766 + MIR SINE MIR 112 183 -79 247 303 44 3 chr10 13314659 13314793 -127001972 - MIR SINE MIR -7 201 57 2129 31 15 11 chr10 13315152 13315413 -127001352 - L1PA5 LINE L1 0 6154 5893 1633 134 4 4 chr10 13315417 13315655 -127001110 - AluSx SINE Alu -45 267 30 554 117 11 21 chr10 13316233 13316327 -127000438 + FRAM SINE Alu 74 166 -10 1347 239 30 18 chr10 13317100 13317463 -126999302 + LTR10C LTR ERV1 188 479 -26 283 133 0 0 chr10 13317702 13317747 -126999018 + L2 LINE L2 3226 3270 -2 379 254 85 38 chr10 13318027 13318264 -126998501 - L2 LINE L2 -290 3023 2764 2094 128 7 0 chr10 13318457 13318761 -126998004 - AluSg SINE Alu -4 306 1 199 280 43 21 chr10 13318937 13319030 -126997735 + L3 LINE CR1 1065 1159 -418 1910 145 0 7 chr10 13319328 13319625 -126997140 - AluJo SINE Alu -17 295 1 315 237 41 62 chr10 13320290 13320387 -126996378 - HAL1 LINE L1 -1 2506 2412 305 297 51 0 chr10 13321546 13321664 -126995101 + MIR SINE MIR 57 180 -82 2130 138 0 0 chr10 13322042 13322340 -126994425 + AluSx SINE Alu 1 298 -14 2840 226 62 35 chr10 13322623 13323587 -126993178 - L1ME1 LINE L1 -5 6161 5170 1820 210 32 22 chr10 13323578 13323645 -126993120 - L1MB8 LINE L1 -1 6177 6112 * 2218 98 7 3 chr10 13323645 13323940 -126992825 - AluSq SINE Alu -17 296 1 1820 210 32 22 chr10 13323940 13324333 -126992432 - L1MB8 LINE L1 -66 6112 5712 208 283 170 9 chr10 13327263 13327369 -126989396 + L2 LINE L2 3142 3264 -8 1478 205 27 27 chr10 13327843 13328214 -126988551 + MER93b LTR ERV1 1 371 -2 720 186 161 12 chr10 13328508 13328669 -126988096 - MER45C DNA AcHobo 0 953 769 321 26 0 0 chr10 13330007 13330045 -126986720 + (CA)n Simple_repeat Simple_repeat 2 39 0 2267 104 3 0 chr10 13330199 13330498 -126986267 + AluY SINE Alu 3 302 -9 1957 127 36 7 chr10 13332176 13332484 -126984281 + AluSx SINE Alu 1 316 0 499 173 19 10 chr10 13333014 13333118 -126983647 + FLAM_C SINE Alu 4 108 -35 207 269 341 24 chr10 13333342 13333509 -126983256 - MIR SINE MIR -33 229 10 2068 113 0 20 chr10 13334480 13334782 -126981983 - AluSx SINE Alu -16 296 1 183 80 0 0 chr10 13335523 13335548 -126981217 + (TG)n Simple_repeat Simple_repeat 1 25 0 208 293 130 51 chr10 13335892 13336071 -126980694 - L2 LINE L2 -5 3308 3108 1667 166 32 7 chr10 13336071 13336349 -126980416 + AluJo SINE Alu 1 285 -27 208 293 130 51 chr10 13336349 13336384 -126980381 - L2 LINE L2 -205 3108 3077 3297 154 11 9 chr10 13336867 13337431 -126979334 - L1PB4 LINE L1 0 6156 5592 340 106 0 61 chr10 13337704 13337770 -126978995 - Alu SINE Alu -1 299 238 374 77 0 0 chr10 13337901 13337953 -126978812 + Alu SINE Alu 248 299 -1 2340 134 64 43 chr10 13338283 13338702 -126978063 - MSTC LTR MaLR 0 428 1 656 283 23 12 chr10 13340217 13340390 -126976375 + MER5B DNA MER1_type 1 175 -3 1985 167 123 5 chr10 13340391 13340774 -126975991 - MSTA LTR MaLR 0 428 1 384 316 81 0 chr10 13341361 13341497 -126975268 - MIR3 SINE MIR -6 202 56 1376 160 0 13 chr10 13341632 13341863 -126974902 + AluJb SINE Alu 78 305 -7 239 343 59 10 chr10 13342266 13342368 -126974397 - MIR SINE MIR -64 144 38 2191 86 0 0 chr10 13342491 13342771 -126973994 + AluSc SINE Alu 1 280 -29 279 0 0 0 chr10 13342774 13342805 -126973960 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 503 157 139 0 chr10 13342860 13342975 -126973790 + MER105 DNA DNA 17 147 -57 2196 106 7 0 chr10 13343277 13343580 -126973185 + AluSq SINE Alu 1 305 -8 1875 122 10 22 chr10 13343587 13343898 -126972867 + AluSg SINE Alu 3 309 -1 509 333 30 14 chr10 13344016 13344256 -126972509 - MIR SINE MIR -2 260 18 260 306 37 37 chr10 13345258 13345366 -126971399 + MLT1K LTR MaLR 481 588 0 3059 140 32 45 chr10 13346543 13346825 -126969940 - MER1A DNA MER1_type -2173 527 254 2026 137 0 0 chr10 13346825 13347124 -126969641 - AluSx SINE Alu -13 299 1 3059 140 32 45 chr10 13347124 13347375 -126969390 - MER1A DNA MER1_type -2446 254 1 2095 116 0 3 chr10 13347424 13347735 -126969030 + AluSg SINE Alu 1 310 0 401 305 34 99 chr10 13348106 13348368 -126968397 - L3 LINE CR1 -863 714 470 217 236 109 0 chr10 13348375 13348430 -126968335 - L2 LINE L2 -4 3268 3208 1997 133 3 0 chr10 13348653 13348962 -126967803 - AluSx SINE Alu -2 310 1 1803 168 13 7 chr10 13349075 13349385 -126967380 - AluJb SINE Alu 0 312 1 390 148 0 0 chr10 13349456 13349517 -126967248 + AluS SINE Alu 1 61 -242 1821 85 4 31 chr10 13349823 13350081 -126966684 - AluSc SINE Alu -58 251 1 1146 161 57 0 chr10 13350445 13350656 -126966109 - L1PB4 LINE L1 0 6156 5934 1789 115 3 49 chr10 13350755 13351059 -126965706 + AluSx SINE Alu 7 296 -16 472 303 29 111 chr10 13351279 13351622 -126965143 + L2 LINE L2 2957 3271 -1 773 196 25 6 chr10 13351629 13351792 -126964973 + FRAM SINE Alu 1 166 0 684 0 0 0 chr10 13351918 13351994 -126964771 + (CTTAT)n Simple_repeat Simple_repeat 5 80 0 1684 151 22 7 chr10 13351999 13352277 -126964488 - AluSx SINE Alu -30 282 1 374 0 22 0 chr10 13352331 13352377 -126964388 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 1306 127 25 118 chr10 13353151 13353466 -126963299 + AluYb8 SINE Alu 1 286 -32 428 0 19 0 chr10 13353467 13353519 -126963246 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr10 13353576 13353601 -126963164 + (T)n Simple_repeat Simple_repeat 1 25 0 798 156 0 84 chr10 13354139 13354293 -126962472 - FRAM SINE Alu -42 134 1 1002 232 119 55 chr10 13354983 13355418 -126961347 + MLT2B1 LTR ERVL 2 464 -56 1653 151 0 70 chr10 13355423 13355735 -126961030 + AluJo SINE Alu 6 295 -17 2028 107 0 3 chr10 13355735 13356023 -126960742 + AluSc SINE Alu 19 306 -3 231 156 44 0 chr10 13356058 13356103 -126960662 + MLT2B1 LTR ERVL 462 508 -12 251 252 36 63 chr10 13356201 13356312 -126960453 - MIR3 SINE MIR -32 176 69 1955 60 0 4 chr10 13356666 13356917 -126959848 - AluY SINE Alu -14 297 48 2175 110 0 3 chr10 13357142 13357451 -126959314 + AluSq SINE Alu 1 308 -5 1916 75 11 19 chr10 13357735 13358002 -126958763 + AluY SINE Alu 10 274 -37 1198 153 13 55 chr10 13358143 13358379 -126958386 - AluJo SINE Alu -13 299 74 2239 105 0 0 chr10 13358752 13359056 -126957709 - AluSx SINE Alu -8 304 1 1892 83 8 4 chr10 13359969 13360221 -126956544 - AluSx SINE Alu -59 253 1 414 103 0 0 chr10 13360432 13360500 -126956265 - L1PB3 LINE L1 -7 6147 6080 2212 100 0 0 chr10 13360501 13360800 -126955965 - AluSq SINE Alu -6 307 9 970 185 67 0 chr10 13360917 13361095 -126955670 + MER58A DNA MER1_type 35 224 0 290 299 22 51 chr10 13361102 13361239 -126955526 - L2 LINE L2 -189 3083 2951 247 295 0 0 chr10 13361386 13361447 -126955318 - MIR SINE MIR -17 245 185 2185 79 3 3 chr10 13362123 13362413 -126954352 + AluSg SINE Alu 1 290 -20 1867 194 52 2 chr10 13362519 13362953 -126953812 - MER89 LTR ERV1 -1 558 3 410 271 50 9 chr10 13363249 13363378 -126953387 + MIR3 SINE MIR 74 208 0 236 264 14 14 chr10 13363500 13363572 -126953193 - L2 LINE L2 -3 3310 3239 1659 162 3 29 chr10 13363589 13363897 -126952868 + AluJo SINE Alu 1 300 -12 1709 131 0 40 chr10 13364801 13365098 -126951667 + AluJb SINE Alu 1 285 -27 193 214 0 29 chr10 13365123 13365193 -126951572 + (TATATG)n Simple_repeat Simple_repeat 3 70 0 282 56 0 0 chr10 13365209 13365245 -126951520 + (CA)n Simple_repeat Simple_repeat 2 37 0 282 233 0 47 chr10 13365245 13365331 -126951434 - L1MC4 LINE L1 -1347 6695 6614 237 291 23 0 chr10 13365255 13365341 -126951424 + L1MC4 LINE L1 6614 6701 -1341 * 353 231 74 116 chr10 13366505 13366626 -126950139 - MER5B DNA MER1_type 0 178 63 1953 132 36 0 chr10 13417158 13417438 -126899327 - AluSq SINE Alu -23 290 1 2274 78 7 17 chr10 13417443 13417737 -126899028 - AluY SINE Alu -20 291 1 201 200 20 0 chr10 13417753 13417803 -126898962 + (TA)n Simple_repeat Simple_repeat 1 51 0 2580 54 9 9 chr10 13417803 13418135 -126898630 - L1PA5 LINE L1 -9 6145 5814 1076 169 0 0 chr10 13418157 13418329 -126898436 + AluSg/x SINE Alu 134 305 -5 1729 137 22 11 chr10 13418332 13418602 -126898163 - AluJo SINE Alu -31 281 9 1076 148 0 101 chr10 13419688 13419897 -126896868 - MLT2B3 LTR ERVL 0 554 367 2216 97 20 0 chr10 13420146 13420446 -126896319 + AluSq SINE Alu 1 306 -7 591 118 12 0 chr10 13420455 13420540 -126896225 + L1PA6 LINE L1 11 96 -6050 34075 67 8 7 chr10 13420540 13425843 -126890922 + L1PA6 LINE L1 847 6154 0 813 235 7 0 chr10 13426672 13426825 -126889940 + MER63A DNA MER1_type 41 194 -16 231 246 79 35 chr10 13426917 13427031 -126889734 - L1ME3 LINE L1 -81 6081 5963 1499 232 50 86 chr10 13427097 13427135 -126889630 - L1ME3 LINE L1 -219 5951 5913 2401 102 0 0 chr10 13427135 13427440 -126889325 + AluSq SINE Alu 1 305 -8 1499 232 50 86 chr10 13427440 13427473 -126889292 - L1ME3 LINE L1 -257 5913 5880 1927 176 0 0 chr10 13427473 13427769 -126888996 - AluJb SINE Alu -16 296 1 1499 232 50 86 chr10 13427769 13427842 -126888923 - L1ME3 LINE L1 -290 5880 5806 1982 169 0 7 chr10 13427842 13428149 -126888616 - AluJb SINE Alu -7 305 1 1499 232 50 86 chr10 13428149 13428199 -126888566 - L1ME3 LINE L1 -364 5806 5756 766 244 76 10 chr10 13428199 13428396 -126888369 - MER63A DNA MER1_type 0 210 1 1499 232 50 86 chr10 13428396 13428762 -126888003 - L1ME3 LINE L1 -414 5756 5417 2597 50 0 3 chr10 13428762 13429061 -126887704 - AluSx SINE Alu -14 298 1 1499 232 50 86 chr10 13429061 13429216 -126887549 - L1ME3 LINE L1 -753 5417 5258 2155 119 0 0 chr10 13429547 13429833 -126886932 - AluSg SINE Alu -24 286 1 2275 128 0 0 chr10 13430202 13430514 -126886251 + AluSx SINE Alu 1 312 0 1145 219 191 45 chr10 13430514 13430697 -126886068 + L1MC4a LINE L1 5517 5672 -2136 2540 71 0 7 chr10 13430697 13431007 -126885758 + AluY SINE Alu 2 309 -2 1145 219 191 45 chr10 13431007 13431358 -126885407 + L1MC4a LINE L1 5672 6129 -1679 649 266 107 29 chr10 13431706 13432281 -126884484 + L1MC5 LINE L1 6554 7386 -575 2070 125 4 0 chr10 13432782 13433097 -126883668 - AluSq SINE Alu 0 316 1 2733 99 59 0 chr10 13433156 13433560 -126883205 - MSTA LTR MaLR 0 428 1 941 198 0 0 chr10 13433561 13433718 -126883047 - FRAM SINE Alu -9 157 1 1004 221 91 80 chr10 13433788 13434191 -126882574 - MLT1J LTR MaLR -44 467 54 1984 153 0 0 chr10 13434191 13434504 -126882261 + AluSx SINE Alu 1 313 0 1004 221 91 80 chr10 13434504 13434559 -126882206 - MLT1J LTR MaLR -457 54 1 1386 93 0 0 chr10 13434768 13434940 -126881825 - AluSc SINE Alu -11 298 127 227 81 0 0 chr10 13434940 13434977 -126881788 + L1MA9 LINE L1 6263 6299 -13 2137 129 0 3 chr10 13436839 13437134 -126879631 - AluSx SINE Alu -18 294 1 219 222 19 0 chr10 13437424 13437478 -126879287 + MER5C DNA MER1_type 70 124 -200 404 269 9 19 chr10 13437641 13437749 -126879016 - MER94 DNA DNA -1 133 27 1882 105 72 11 chr10 13437749 13438026 -126878739 + AluSx SINE Alu 1 294 -18 739 323 40 8 chr10 13438081 13438546 -126878219 + ERVL LTR ERVL 1732 2278 -3486 1164 178 84 41 chr10 13438573 13438916 -126877849 + L1M4 LINE L1 1225 1582 -4960 696 186 103 44 chr10 13438892 13439096 -126877669 + L1MB7 LINE L1 6451 6666 -16 * 408 195 11 0 chr10 13439426 13439513 -126877252 - L1MB2 LINE L1 -16 6155 6068 299 279 87 10 chr10 13439653 13439757 -126877008 + L2 LINE L2 3136 3247 -25 217 224 20 0 chr10 13440771 13440820 -126875945 - MER5B DNA MER1_type -1 177 128 2430 216 67 21 chr10 13441114 13441679 -126875086 - MLT1E LTR MaLR -2 591 1 911 185 212 79 chr10 13442019 13442197 -126874568 - MLT1A2 LTR MaLR 0 374 221 2300 93 10 7 chr10 13442197 13442499 -126874266 - AluSc SINE Alu -6 303 1 911 185 212 79 chr10 13442499 13442650 -126874115 - MLT1A2 LTR MaLR -153 221 1 396 59 0 0 chr10 13442844 13442895 -126873870 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 234 0 0 0 chr10 13442897 13442923 -126873842 + (TCCG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr10 13444401 13444422 -126872343 + (TCCCC)n Simple_repeat Simple_repeat 2 22 0 1719 182 0 0 chr10 13444425 13444705 -126872060 - AluJb SINE Alu -32 280 1 2182 105 14 0 chr10 13444856 13445141 -126871624 + AluSx SINE Alu 8 296 -16 462 267 47 88 chr10 13445677 13445973 -126870792 - L2 LINE L2 0 3313 3030 2017 111 0 97 chr10 13445978 13446183 -126870582 - AluSc SINE Alu 0 309 149 2279 107 0 0 chr10 13446183 13446474 -126870291 - AluSg SINE Alu -19 291 1 2017 111 0 97 chr10 13446474 13446610 -126870155 - AluSc SINE Alu -160 149 1 887 213 5 35 chr10 13446639 13446841 -126869924 + AluJo SINE Alu 1 196 -116 1019 308 74 2 chr10 13447174 13447567 -126869198 + L2 LINE L2 2240 2660 -654 456 306 133 34 chr10 13447647 13447970 -126868795 + L2 LINE L2 2850 3204 -109 2276 132 5 24 chr10 13447970 13448349 -126868416 + L1PA13 LINE L1 5792 6163 0 183 286 0 0 chr10 13448379 13448421 -126868344 + L2 LINE L2 3193 3234 -79 360 0 0 0 chr10 13448437 13448477 -126868288 + (TG)n Simple_repeat Simple_repeat 2 41 0 537 143 0 0 chr10 13448480 13448557 -126868208 - FLAM SINE Alu -25 118 42 274 237 0 53 chr10 13448600 13448676 -126868089 + L2 LINE L2 3201 3272 0 369 260 9 110 chr10 13448705 13448901 -126867864 - MIR SINE MIR -65 143 6 650 236 39 35 chr10 13448921 13449124 -126867641 - L1ME1 LINE L1 -9 6157 5954 226 330 97 0 chr10 13449182 13449285 -126867480 + MIR SINE MIR 108 220 -42 1426 207 31 63 chr10 13449294 13449676 -126867089 - MLT1A2 LTR MaLR 0 374 5 258 235 2 0 chr10 13449692 13449746 -126867019 - MIR SINE MIR -114 94 40 1742 177 13 29 chr10 13450263 13450574 -126866191 - AluJo SINE Alu -6 306 1 2420 116 8 8 chr10 13450746 13451101 -126865664 - THE1A LTR MaLR 0 355 1 24 0 0 0 chr10 13451124 13451148 -126865617 + AT_rich Low_complexity Low_complexity 1 24 0 463 265 32 70 chr10 13451588 13451773 -126864992 - MIR SINE MIR -56 206 29 261 235 37 12 chr10 13452236 13452317 -126864448 - MLT1K LTR MaLR -4 584 502 366 23 0 0 chr10 13453600 13453643 -126863122 + (CA)n Simple_repeat Simple_repeat 2 44 0 544 285 14 14 chr10 13453645 13453789 -126862976 + MIR3 SINE MIR 40 183 -25 1658 133 0 0 chr10 13453929 13454155 -126862610 + AluSx SINE Alu 1 226 -86 1121 164 187 11 chr10 13454155 13454423 -126862342 - MER51B LTR ERV1 0 377 63 401 209 63 89 chr10 13454425 13454583 -126862182 - MER51B LTR ERV1 -223 154 1 322 230 0 0 chr10 13454583 13454657 -126862108 + AluJ/FRAM SINE Alu 223 296 -6 2247 116 0 19 chr10 13454660 13454978 -126861787 + AluSx SINE Alu 1 312 0 195 69 0 0 chr10 13454982 13455011 -126861754 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 594 251 29 17 chr10 13455125 13455300 -126861465 - MER63A DNA MER1_type -2 208 32 1867 223 58 19 chr10 13455340 13455802 -126860963 + MLT2B1 LTR ERVL 1 480 -40 1956 138 7 10 chr10 13455813 13456110 -126860655 + AluJo SINE Alu 1 296 -16 274 84 4 0 chr10 13456154 13456202 -126860563 + MLT2B2 LTR ERVL 464 507 -8 288 0 0 0 chr10 13457044 13457076 -126859689 + (A)n Simple_repeat Simple_repeat 1 32 0 2175 111 0 0 chr10 13457420 13457724 -126859041 + AluSc SINE Alu 1 304 0 2177 116 0 17 chr10 13458454 13458755 -126858010 + AluJb SINE Alu 1 296 -16 221 359 58 0 chr10 13459805 13459908 -126856857 - MIR3 SINE MIR -50 158 50 2345 93 3 0 chr10 13460994 13461294 -126855471 + AluSc SINE Alu 1 301 -8 732 247 39 0 chr10 13461873 13462055 -126854710 - MER5A DNA MER1_type 0 189 1 640 214 193 32 chr10 13462903 13463090 -126853675 - MER20 DNA MER1_type -2 217 1 2578 80 0 0 chr10 13463487 13463800 -126852965 + AluSq SINE Alu 1 313 0 2100 130 3 0 chr10 13464229 13464513 -126852252 + AluSx SINE Alu 7 291 -21 827 172 240 9 chr10 13464659 13464880 -126851885 - MER31B LTR ERV1 0 466 195 424 258 76 15 chr10 13464886 13465018 -126851747 + MER31B LTR ERV1 35 174 -292 920 205 57 28 chr10 13465023 13465309 -126851456 - LTR9 LTR ERV1 0 612 324 2348 79 3 23 chr10 13465368 13465672 -126851093 - AluSp SINE Alu -5 308 11 289 209 0 30 chr10 13465707 13465774 -126850991 - LTR9 LTR ERV1 -299 313 249 * 361 78 0 16 chr10 13465772 13465836 -126850929 - AluSc SINE Alu 0 299 237 * 1148 150 7 113 chr10 13465835 13466109 -126850656 - LTR9 LTR ERV1 -367 245 1 243 186 0 0 chr10 13466120 13466163 -126850602 + MER31B LTR ERV1 195 237 -229 541 186 64 75 chr10 13466164 13466352 -126850413 - MER31B LTR ERV1 -278 188 3 234 291 187 30 chr10 13466384 13466518 -126850247 + MER5B DNA MER1_type 23 177 -1 3703 93 40 77 chr10 13466542 13466579 -126850186 - MER4A LTR ERV1 0 600 563 2353 100 3 0 chr10 13466579 13466888 -126849877 - AluSq SINE Alu -3 310 1 3703 93 40 77 chr10 13466888 13467276 -126849489 - MER4A LTR ERV1 -37 563 162 189 0 0 0 chr10 13467276 13467297 -126849468 + (TTAG)n Simple_repeat Simple_repeat 2 22 0 2377 91 0 0 chr10 13467297 13467584 -126849181 - AluSp SINE Alu -26 287 1 3703 93 40 77 chr10 13467584 13467779 -126848986 - MER4A LTR ERV1 -436 164 1 215 196 20 39 chr10 13468870 13468921 -126847844 - L2 LINE L2 -13 3259 3210 722 226 113 5 chr10 13469896 13470082 -126846683 - L2 LINE L2 -1 3312 3107 2039 120 4 0 chr10 13470363 13470638 -126846127 - AluSx SINE Alu -33 279 4 2203 134 0 0 chr10 13471163 13471461 -126845304 + AluSx SINE Alu 1 298 -14 195 309 77 111 chr10 13472358 13472565 -126844200 + L2 LINE L2 2970 3169 -103 214 301 14 41 chr10 13472647 13472695 -126844070 - L2 LINE L2 -1 3271 3224 957 216 182 24 chr10 13472695 13472992 -126843773 + MER2 DNA MER2_type 1 344 0 214 301 14 41 chr10 13472992 13473016 -126843749 - L2 LINE L2 -48 3224 3201 2151 103 3 20 chr10 13473022 13473322 -126843443 + AluSx SINE Alu 1 295 -17 839 267 142 69 chr10 13473419 13474024 -126842741 - L2 LINE L2 0 3313 2674 1963 177 18 9 chr10 13474024 13474358 -126842407 + MER1B DNA MER1_type 1 337 0 839 267 142 69 chr10 13474358 13474490 -126842275 - L2 LINE L2 -639 2674 2553 1313 289 143 29 chr10 13475337 13475708 -126841057 - L2 LINE L2 -645 2669 2342 2977 214 34 14 chr10 13475708 13476347 -126840418 + MER82 DNA MER2_type 1 652 -1 1313 289 143 29 chr10 13476347 13476633 -126840132 - L2 LINE L2 -972 2342 1937 2450 84 3 7 chr10 13476642 13476952 -126839813 - AluSp SINE Alu -4 309 1 1804 167 17 3 chr10 13477873 13478160 -126838605 + AluJo SINE Alu 1 291 -21 1945 145 13 13 chr10 13478702 13479005 -126837760 - AluJo SINE Alu -4 308 6 355 296 38 8 chr10 13479321 13479453 -126837312 - L3b LINE CR1 -241 1342 1207 238 295 29 87 chr10 13479546 13479719 -126837046 + MIR3 SINE MIR 41 203 -5 195 293 115 51 chr10 13479766 13479923 -126836842 - L3b LINE CR1 -284 1299 1133 2232 118 14 0 chr10 13480929 13481226 -126835539 - AluSx SINE Alu -11 301 1 27 29 0 0 chr10 13481236 13481270 -126835495 + AT_rich Low_complexity Low_complexity 1 34 0 2469 100 0 0 chr10 13482259 13482570 -126834195 - AluSx SINE Alu -1 311 1 2386 87 10 0 chr10 13483476 13483774 -126832991 - AluSq SINE Alu -12 301 1 934 181 12 0 chr10 13485825 13485991 -126830774 - FRAM SINE Alu -1 175 8 2208 138 0 0 chr10 13486118 13486430 -126830335 + AluSx SINE Alu 1 312 0 2048 84 0 0 chr10 13486994 13487245 -126829520 + AluSg SINE Alu 1 251 -59 604 140 9 9 chr10 13487454 13487561 -126829204 - FRAM SINE Alu -2 174 68 1253 77 38 6 chr10 13488422 13488605 -126828160 - MER30 DNA MER1_type -41 189 1 484 282 28 15 chr10 13488649 13488867 -126827898 + MIR3 SINE MIR 14 235 -27 388 226 34 89 chr10 13488904 13489050 -126827715 + MIR SINE MIR 69 206 -56 191 175 196 41 chr10 13489608 13489705 -126827060 + L2 LINE L2 3145 3256 -16 225 108 0 0 chr10 13489871 13489908 -126826857 + (CA)n Simple_repeat Simple_repeat 1 37 0 1751 171 0 46 chr10 13489984 13490288 -126826477 + AluJo SINE Alu 5 294 -18 3663 180 28 43 chr10 13490547 13491379 -126825386 - L1MB3 LINE L1 0 6183 5365 228 67 0 0 chr10 13492228 13492258 -126824507 + (CA)n Simple_repeat Simple_repeat 1 30 0 969 169 50 41 chr10 13492738 13492957 -126823808 - MLT1A2 LTR MaLR 0 374 154 235 239 0 0 chr10 13492952 13492998 -126823767 - MLT1L LTR MaLR -416 199 154 * 286 319 173 68 chr10 13493133 13493722 -126823043 - L2 LINE L2 -420 2894 2244 232 286 60 12 chr10 13494212 13494296 -126822469 + L2 LINE L2 3174 3261 -11 1706 129 55 80 chr10 13496456 13496767 -126819998 - AluJo SINE Alu -9 303 1 207 234 91 52 chr10 13497472 13497549 -126819216 + L3 LINE CR1 1161 1240 -337 * 417 295 113 82 chr10 13497547 13497866 -126818899 - L2 LINE L2 0 3272 2944 317 195 0 13 chr10 13498660 13498737 -126818028 + GA-rich Low_complexity Low_complexity 2 77 0 207 338 14 14 chr10 13499686 13499760 -126817005 - L2 LINE L2 -3 3269 3196 189 0 0 0 chr10 13500483 13500504 -126816261 + (TCCA)n Simple_repeat Simple_repeat 1 21 0 1103 111 0 6 chr10 13500504 13500684 -126816081 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 778 182 8 4 chr10 13500684 13500934 -126815831 + (TCCA)n Simple_repeat Simple_repeat 1 251 0 201 111 93 37 chr10 13500923 13501031 -126815734 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 * 266 326 36 8 chr10 13501083 13501212 -126815553 - MIR SINE MIR -76 132 42 24 32 0 0 chr10 13501390 13501421 -126815344 + AT_rich Low_complexity Low_complexity 1 31 0 2325 105 0 3 chr10 13501788 13502092 -126814673 - AluSg SINE Alu -7 303 1 303 269 113 56 chr10 13502326 13502486 -126814279 + MIR SINE MIR 92 260 -2 249 333 13 13 chr10 13502565 13502643 -126814122 + L2 LINE L2 3150 3227 -45 1938 77 109 0 chr10 13502683 13502953 -126813812 + AluSx SINE Alu 12 308 0 272 220 17 0 chr10 13503036 13503095 -126813670 + MIR3 SINE MIR 104 163 -45 1875 128 60 0 chr10 13503607 13503898 -126812867 + AluSx SINE Alu 1 307 0 2051 150 0 25 chr10 13503923 13504243 -126812522 + AluJo SINE Alu 1 312 0 2242 81 0 0 chr10 13504250 13504521 -126812244 + AluSc SINE Alu 1 271 -38 2341 100 7 0 chr10 13504626 13504927 -126811838 - AluSq SINE Alu -10 303 1 226 372 71 46 chr10 13505066 13505391 -126811374 - L2 LINE L2 -7 3265 2933 205 286 18 0 chr10 13505509 13505565 -126811200 + L2 LINE L2 3185 3241 -72 206 365 74 14 chr10 13506290 13506438 -126810327 + L2 LINE L2 2176 2332 -982 406 338 70 6 chr10 13507511 13507668 -126809097 + L2 LINE L2 3103 3269 -3 2035 129 33 3 chr10 13507762 13508065 -126808700 + AluSq SINE Alu 1 312 -1 2219 132 0 0 chr10 13508092 13508387 -126808378 + AluSx SINE Alu 1 295 -17 851 102 31 0 chr10 13508420 13508548 -126808217 - L1M2 LINE L1 -815 5476 5345 2767 161 57 40 chr10 13508578 13509129 -126807636 + L1MB1 LINE L1 5556 6119 -49 2053 126 13 10 chr10 13509129 13509438 -126807327 + AluJb SINE Alu 2 311 -1 2767 161 57 40 chr10 13509438 13509488 -126807277 + L1MB1 LINE L1 6119 6167 -1 2252 100 10 0 chr10 13509632 13509931 -126806834 - AluSq SINE Alu -11 302 1 2256 121 0 0 chr10 13511690 13511995 -126804770 + AluSx SINE Alu 1 305 -7 371 353 26 6 chr10 13512215 13512371 -126804394 - MIR3 SINE MIR 0 208 50 1819 127 3 85 chr10 13513105 13513445 -126803320 - AluSx SINE Alu 0 312 1 1801 136 35 49 chr10 13513779 13514125 -126802640 - MLT1A1 LTR MaLR 0 365 25 925 232 34 19 chr10 13514312 13514519 -126802246 - MIR SINE MIR 0 262 53 296 275 8 67 chr10 13514587 13514707 -126802058 + MIR SINE MIR 90 202 -60 252 206 16 32 chr10 13515159 13515222 -126801543 + L2 LINE L2 3203 3264 -8 2228 97 46 65 chr10 13515903 13515945 -126800820 - THE1B LTR MaLR 0 364 323 2418 91 7 10 chr10 13515945 13516254 -126800511 + AluSq SINE Alu 1 308 -5 2228 97 46 65 chr10 13516254 13516582 -126800183 - THE1B LTR MaLR -41 323 1 472 333 41 31 chr10 13516850 13517045 -126799720 + MIR SINE MIR 61 257 -5 1954 103 29 7 chr10 13517045 13517340 -126799425 - AluSx SINE Alu 0 307 7 655 321 67 8 chr10 13517609 13517746 -126799019 - MIR SINE MIR -1 261 103 2260 114 0 0 chr10 13517746 13518045 -126798720 + AluSx SINE Alu 1 299 -13 655 321 67 8 chr10 13518045 13518147 -126798618 - MIR SINE MIR -159 103 8 288 316 103 40 chr10 13518778 13518952 -126797813 + MIR SINE MIR 21 205 -57 186 333 105 0 chr10 13519285 13519390 -126797375 - L2 LINE L2 -822 2492 2377 2041 85 62 0 chr10 13519421 13519679 -126797086 - AluSc SINE Alu -35 274 1 1722 155 48 30 chr10 13520368 13520704 -126796061 - MLT2D LTR ERVL -48 366 25 2324 109 3 0 chr10 13521050 13521353 -126795412 + AluSx SINE Alu 1 304 -8 374 119 194 0 chr10 13524482 13524549 -126792216 + MADE1 DNA Mariner 1 80 0 194 250 143 36 chr10 13525195 13525212 -126791553 - MIR SINE MIR -56 206 192 2222 120 3 3 chr10 13525212 13525512 -126791253 + AluSx SINE Alu 1 300 -12 194 250 143 36 chr10 13525512 13525578 -126791187 - MIR SINE MIR -70 192 114 440 209 41 12 chr10 13526498 13526670 -126790095 + CT-rich Low_complexity Low_complexity 4 180 0 883 88 0 62 chr10 13526670 13526862 -126789903 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 335 182 20 20 chr10 13526912 13527011 -126789754 + CT-rich Low_complexity Low_complexity 2 100 0 1660 149 39 4 chr10 13527022 13527277 -126789488 - AluJo SINE Alu -44 268 5 230 283 9 94 chr10 13527380 13527486 -126789279 + MIR SINE MIR 154 250 -12 2377 69 3 0 chr10 13527669 13527957 -126788808 + AluSq SINE Alu 11 299 -14 2363 87 0 7 chr10 13528753 13529053 -126787712 + AluSc SINE Alu 1 298 -11 508 216 18 0 chr10 13529784 13529895 -126786870 + MER81 DNA DNA 1 113 -1 315 0 0 0 chr10 13530206 13530241 -126786524 + (CA)n Simple_repeat Simple_repeat 2 36 0 2400 67 0 3 chr10 13532107 13532389 -126784376 + AluSc SINE Alu 5 285 -24 216 0 0 0 chr10 13533194 13533218 -126783547 + (A)n Simple_repeat Simple_repeat 1 24 0 2124 107 11 0 chr10 13535811 13536115 -126780650 + AluSg SINE Alu 1 307 0 323 303 136 80 chr10 13536381 13536543 -126780222 + MER91A DNA MER1_type 11 181 -15 183 139 0 0 chr10 13536983 13537019 -126779746 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 265 321 46 18 chr10 13537345 13537454 -126779311 - MIR SINE MIR -7 255 144 271 140 40 140 chr10 13537564 13537664 -126779101 - L2 LINE L2 -510 2804 2715 2121 98 0 7 chr10 13537926 13538240 -126778525 - AluSc SINE Alu 0 309 15 299 128 0 6 chr10 13538240 13538297 -126778468 - AluSc SINE Alu -263 40 1 2049 115 0 21 chr10 13538795 13539081 -126777684 + AluSg SINE Alu 1 280 -30 362 240 83 0 chr10 13539418 13539514 -126777251 - MER5A DNA MER1_type -77 112 9 342 239 125 0 chr10 13539532 13539620 -126777145 + MER5B DNA MER1_type 3 101 -77 285 277 20 40 chr10 13539784 13539885 -126776880 + L2 LINE L2 207 305 -3009 198 71 0 0 chr10 13540053 13540081 -126776684 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 783 247 4 62 chr10 13540091 13540176 -126776589 - MIR SINE MIR -28 234 146 1800 151 26 7 chr10 13540176 13540295 -126776470 + AluJb SINE Alu 1 116 -196 441 0 0 0 chr10 13540295 13540344 -126776421 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1800 151 26 7 chr10 13540344 13540529 -126776236 + AluJb SINE Alu 116 311 -1 783 247 4 62 chr10 13540529 13540616 -126776149 - MIR SINE MIR -116 146 75 663 208 174 94 chr10 13540616 13540977 -126775788 + MLT1B LTR MaLR 1 390 0 783 247 4 62 chr10 13540977 13541030 -126775735 - MIR SINE MIR -187 75 21 1297 229 64 101 chr10 13541172 13541756 -126775009 - MLT1F1 LTR MaLR -4 563 1 1967 122 3 10 chr10 13542136 13542432 -126774333 - AluSx SINE Alu -18 294 1 271 153 0 225 chr10 13543140 13543161 -126773604 - L2 LINE L2 -5 3308 3284 1807 139 0 17 chr10 13543161 13543448 -126773317 + AluJo SINE Alu 1 282 -30 191 36 36 0 chr10 13543451 13543479 -126773286 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1812 161 0 0 chr10 13543487 13543779 -126772986 + AluSx SINE Alu 1 292 -20 271 153 0 225 chr10 13543779 13543855 -126772910 - L2 LINE L2 -39 3274 3223 447 243 59 53 chr10 13544215 13544384 -126772381 + MIR3 SINE MIR 27 196 -12 391 220 60 44 chr10 13544802 13544984 -126771781 - Charlie7 DNA MER1_type 0 2612 2428 845 153 7 0 chr10 13545034 13545205 -126771560 - AluSg/x SINE Alu 0 310 154 463 253 22 51 chr10 13545207 13545289 -126771476 - Charlie7 DNA MER1_type -291 2321 2238 910 181 13 13 chr10 13545289 13545444 -126771321 - FRAM SINE Alu -7 159 5 463 253 22 51 chr10 13545444 13545539 -126771226 - Charlie7 DNA MER1_type -374 2238 2149 214 244 0 0 chr10 13545610 13545655 -126771110 + CT-rich Low_complexity Low_complexity 3 47 0 788 169 0 22 chr10 13546063 13546199 -126770566 - FLAM_A SINE Alu 0 133 1 531 243 176 0 chr10 13546612 13546760 -126770005 - MER5A DNA MER1_type 0 189 16 2224 105 3 0 chr10 13547465 13547770 -126768995 + AluSx SINE Alu 4 309 -3 436 182 252 7 chr10 13549636 13549779 -126766986 - MER5B DNA MER1_type 0 178 1 25 31 0 0 chr10 13549992 13550024 -126766741 + AT_rich Low_complexity Low_complexity 1 32 0 2338 48 0 14 chr10 13550026 13550318 -126766447 + AluY SINE Alu 1 288 -23 1991 113 45 39 chr10 13550459 13550794 -126765971 - THE1B LTR MaLR -27 337 1 395 77 0 0 chr10 13550952 13551004 -126765761 + MADE1 DNA Mariner 1 52 -28 505 308 42 51 chr10 13551032 13551269 -126765496 - MIR SINE MIR -26 236 2 773 141 15 0 chr10 13551936 13552071 -126764694 - L1MB2 LINE L1 -7 6164 6028 436 189 25 90 chr10 13552071 13552119 -126764646 - L1MB4 LINE L1 0 6180 6130 1625 157 48 3 chr10 13552119 13552413 -126764352 - AluJo SINE Alu -5 307 1 436 189 25 90 chr10 13552413 13552486 -126764279 - L1MB4 LINE L1 -50 6130 6067 217 301 97 21 chr10 13553729 13553822 -126762943 + L2 LINE L2 2876 2975 -339 216 298 77 29 chr10 13554069 13554173 -126762592 + L2 LINE L2 3148 3256 -16 580 149 0 0 chr10 13555081 13555168 -126761597 - 5S rRNA rRNA -31 90 4 494 302 152 34 chr10 13555812 13556253 -126760512 - L3 LINE CR1 -35 1542 1050 896 165 192 46 chr10 13556937 13557303 -126759462 + L1MEc LINE L1 2160 2555 -3660 646 235 122 51 chr10 13557501 13557896 -126758869 - L1MC5 LINE L1 -33 7928 7506 2145 109 0 0 chr10 13559375 13559669 -126757096 + AluSg SINE Alu 11 304 -6 824 250 33 9 chr10 13560994 13561206 -126755559 + MER20 DNA MER1_type 1 217 -2 2179 101 7 0 chr10 13561312 13561618 -126755147 + AluSx SINE Alu 1 308 -4 226 233 87 97 chr10 13561789 13561892 -126754873 + MLT2E LTR ERVL 32 133 -495 462 270 20 0 chr10 13562316 13562416 -126754349 - L1MC1 LINE L1 -23 6310 6209 * 647 222 66 14 chr10 13562405 13562617 -126754148 - L1MCa LINE L1 -1586 4840 4618 975 128 61 0 chr10 13562649 13562813 -126753952 - Tigger5 DNA MER2_type -62 2261 2088 259 143 24 0 chr10 13562810 13562852 -126753913 - Tigger5 DNA MER2_type -2229 94 52 * 6503 237 45 26 chr10 13562868 13563838 -126752927 - L1MCa LINE L1 -1810 4616 3666 1717 158 3 13 chr10 13563838 13564141 -126752624 - AluSx SINE Alu -12 300 1 6503 237 45 26 chr10 13564141 13565188 -126751577 - L1MCa LINE L1 -2760 3666 2575 687 187 32 0 chr10 13565189 13565312 -126751453 - FLAM_C SINE Alu -6 127 1 952 183 145 30 chr10 13565323 13565558 -126751207 - AluJo SINE Alu -47 265 4 280 146 21 0 chr10 13565562 13565610 -126751155 - L1MCa LINE L1 -4027 2580 2532 998 167 0 0 chr10 13565610 13565766 -126750999 - AluSg/x SINE Alu -20 292 137 1250 139 120 11 chr10 13565766 13566052 -126750713 - L1MCa LINE L1 -3934 2492 2176 1125 110 0 0 chr10 13566052 13566216 -126750549 - AluY SINE Alu -15 296 133 1688 145 157 15 chr10 13566217 13566733 -126750032 - L1MCa LINE L1 -4242 2184 1495 897 171 6 28 chr10 13566743 13566924 -126749841 - AluJb SINE Alu -14 298 122 334 83 0 0 chr10 13566924 13566972 -126749793 - L1MCa LINE L1 -4963 1463 1416 1351 202 93 39 chr10 13566982 13567032 -126749733 - L1MCa LINE L1 -5875 551 505 1220 182 84 67 chr10 13567032 13567329 -126749436 + AluJo SINE Alu 1 302 0 1351 202 93 39 chr10 13567329 13567634 -126749131 - L1MCa LINE L1 -5921 505 177 453 256 45 0 chr10 13567696 13567829 -126748936 + Charlie4 DNA MER1_type 70 208 -1753 803 159 0 7 chr10 13567847 13567985 -126748780 - FRAM SINE Alu -14 162 26 382 235 37 0 chr10 13567986 13568067 -126748698 + Charlie4 DNA MER1_type 1878 1961 0 341 313 222 22 chr10 13568272 13568821 -126747944 + L2 LINE L2 121 779 -2535 583 261 234 0 chr10 13568864 13569052 -126747713 + MIR SINE MIR 2 233 -29 181 267 81 58 chr10 13569176 13569262 -126747503 + L2 LINE L2 3226 3313 0 1302 155 188 4 chr10 13569732 13569977 -126746788 + AluSc SINE Alu 1 290 -9 180 0 0 0 chr10 13570613 13570633 -126746132 + (T)n Simple_repeat Simple_repeat 1 20 0 3703 104 45 0 chr10 13571348 13571877 -126744888 + MER41A LTR ERV1 2 554 0 925 224 41 25 chr10 13572142 13572485 -126744280 + MER34C LTR ERV1 59 450 -135 992 196 230 31 chr10 13572551 13572709 -126744056 + MER31-int LTR ERV1 877 1002 -3934 2429 186 35 69 chr10 13572709 13573343 -126743422 + LTR9 LTR ERV1 1 612 0 992 196 230 31 chr10 13573343 13573632 -126743133 + MER31-int LTR ERV1 1002 1413 -3523 596 107 0 62 chr10 13573632 13573744 -126743021 + MER4D LTR ERV1 2 106 -766 2231 203 101 55 chr10 13573744 13574329 -126742436 + LTR9 LTR ERV1 1 612 0 * 4772 131 38 16 chr10 13574329 13575080 -126741685 + MER4D LTR ERV1 103 870 -2 459 200 55 0 chr10 13575248 13575358 -126741407 + MER34 LTR ERV1 122 237 -305 336 179 15 15 chr10 13575358 13575425 -126741340 + MER34 LTR ERV1 476 542 0 546 237 63 80 chr10 13575570 13576052 -126740713 + MER57-int LTR ERV1 2102 3183 -1697 540 206 103 12 chr10 13576033 13576198 -126740567 + MER57-int LTR ERV1 2463 2642 -2294 * 1000 252 33 73 chr10 13576294 13576719 -126740046 + MER57-int LTR ERV1 6744 7151 -386 733 253 122 60 chr10 13576760 13577074 -126739691 + MER57A LTR ERV1 60 395 -8 2078 128 0 0 chr10 13577526 13577830 -126738935 - AluSx SINE Alu -8 304 1 268 227 57 68 chr10 13577832 13577920 -126738845 - L2 LINE L2 -1 3312 3226 377 255 154 72 chr10 13578185 13578393 -126738372 - MIR SINE MIR -18 244 20 2335 103 73 6 chr10 13578399 13578740 -126738025 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr10 13578850 13578877 -126737888 + (CA)n Simple_repeat Simple_repeat 1 27 0 2211 51 4 0 chr10 13579111 13579385 -126737380 - AluY SINE Alu -8 303 29 1577 189 117 45 chr10 13579542 13579987 -126736778 + MLT1J LTR MaLR 35 511 0 1294 150 146 31 chr10 13581484 13581744 -126735021 + AluJo SINE Alu 1 290 -12 256 263 105 44 chr10 13581790 13581904 -126734861 - MER112 DNA MER1_type -17 243 123 2111 113 0 0 chr10 13581917 13582217 -126734548 + AluY SINE Alu 12 311 0 477 241 54 0 chr10 13582583 13582695 -126734070 + L2 LINE L2 3192 3309 -4 208 333 82 30 chr10 13583046 13583181 -126733584 + L2 LINE L2 2913 3054 -218 2339 105 51 20 chr10 13583419 13583771 -126732994 - THE1B LTR MaLR -1 363 1 1087 216 84 24 chr10 13584229 13584525 -126732240 - MER58B DNA MER1_type 0 341 28 2659 125 56 0 chr10 13584788 13585196 -126731569 - MSTB1 LTR MaLR -1 431 1 976 186 0 0 chr10 13585945 13586106 -126730659 - FRAM SINE Alu -5 161 1 1676 124 132 0 chr10 13586131 13586397 -126730368 - AluSx SINE Alu -1 301 1 890 109 0 31 chr10 13586405 13586533 -126730232 - FLAM_C SINE Alu -9 124 1 278 201 112 168 chr10 13586817 13587031 -126729734 + MLT1L LTR MaLR 25 226 -389 568 108 0 0 chr10 13587038 13587112 -126729653 + MER31B LTR ERV1 3 76 -390 2111 224 54 56 chr10 13587166 13587795 -126728970 + MER67B LTR ERV1 34 661 0 2250 175 18 48 chr10 13587868 13588223 -126728542 + MSTA LTR MaLR 2 343 -85 1756 118 68 0 chr10 13588223 13588503 -126728262 - AluSx SINE Alu 0 312 14 2250 175 18 48 chr10 13588503 13588587 -126728178 + MSTA LTR MaLR 343 428 0 235 298 114 0 chr10 13588782 13588896 -126727869 + MLT1L LTR MaLR 485 611 -4 425 287 103 17 chr10 13589160 13589334 -126727431 - MLT1K LTR MaLR -244 344 156 2073 119 0 0 chr10 13589563 13589858 -126726907 - AluSx SINE Alu -17 295 1 427 328 0 0 chr10 13590029 13590157 -126726608 - MIR3 SINE MIR -16 192 65 2092 128 0 0 chr10 13590262 13590543 -126726222 + AluSx SINE Alu 1 281 -31 455 0 18 0 chr10 13590543 13590598 -126726167 + (CA)n Simple_repeat Simple_repeat 1 56 0 329 290 71 7 chr10 13591534 13591687 -126725078 + MIR SINE MIR 24 184 -62 2354 95 0 10 chr10 13592729 13593035 -126723730 + AluSc SINE Alu 1 303 -6 1944 127 17 10 chr10 13593986 13594285 -126722480 - AluSx SINE Alu -11 301 1 274 293 208 0 chr10 13594346 13594452 -126722313 + MLT1L LTR MaLR 124 251 -364 308 236 100 9 chr10 13595037 13595147 -126721618 - MIR SINE MIR -30 232 113 560 237 60 84 chr10 13595298 13595547 -126721218 + MLT1J1 LTR MaLR 182 424 -22 2213 84 14 0 chr10 13595942 13596229 -126720536 + AluSg SINE Alu 1 291 -19 404 287 103 17 chr10 13596458 13596632 -126720133 + MLT1K LTR MaLR 156 344 -244 2295 182 19 21 chr10 13597205 13597277 -126719488 - MSTA LTR MaLR 0 428 357 1855 126 65 7 chr10 13597277 13597570 -126719195 + AluSx SINE Alu 1 310 -2 2295 182 19 21 chr10 13597570 13597925 -126718840 - MSTA LTR MaLR -71 357 2 2073 224 54 56 chr10 13597998 13598627 -126718138 - MER67B LTR ERV1 0 661 34 564 108 0 0 chr10 13598681 13598755 -126718010 - MER31B LTR ERV1 -390 76 3 268 195 123 159 chr10 13598762 13598957 -126717808 - MLT1L LTR MaLR -389 226 39 882 109 0 31 chr10 13599260 13599388 -126717377 + FLAM_C SINE Alu 1 124 -9 1666 124 132 0 chr10 13599396 13599662 -126717103 + AluSx SINE Alu 1 301 -1 967 186 0 0 chr10 13599687 13599848 -126716917 + FRAM SINE Alu 1 161 -5 2649 125 56 0 chr10 13600597 13601005 -126715760 + MSTB1 LTR MaLR 1 431 -1 1109 209 84 24 chr10 13601268 13601564 -126715201 + MER58B DNA MER1_type 28 341 0 2333 105 51 20 chr10 13602022 13602374 -126714391 + THE1B LTR MaLR 1 363 -1 2468 97 0 0 chr10 13604209 13604518 -126712247 - AluSg SINE Alu -1 309 1 1721 138 17 38 chr10 13604547 13604836 -126711929 - AluJo SINE Alu -15 297 15 1802 169 7 0 chr10 13605852 13606136 -126710629 + AluJo SINE Alu 1 286 -26 505 164 39 0 chr10 13606302 13606406 -126710359 + L1MB1 LINE L1 6061 6168 0 1955 136 7 14 chr10 13606419 13606698 -126710067 + AluSx SINE Alu 3 279 -33 528 16 0 0 chr10 13606698 13606759 -126710006 + (CA)n Simple_repeat Simple_repeat 1 61 0 234 200 0 20 chr10 13606760 13606810 -126709955 - Charlie7 DNA MER1_type -2525 87 39 1834 154 48 3 chr10 13607046 13607338 -126709427 + AluJo SINE Alu 1 305 -7 1750 126 15 4 chr10 13607640 13607933 -126708832 + AluSq SINE Alu 19 314 0 27 81 0 0 chr10 13608754 13608816 -126707949 + AT_rich Low_complexity Low_complexity 1 62 0 243 61 0 0 chr10 13608868 13608901 -126707864 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 210 37 0 0 chr10 13609657 13609684 -126707081 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2153 104 14 0 chr10 13609687 13609965 -126706800 - AluSx SINE Alu -30 282 1 445 37 0 0 chr10 13610414 13610468 -126706297 + MADE1 DNA Mariner 1 54 -26 403 119 30 0 chr10 13610463 13610530 -126706235 - MADE1 DNA Mariner -11 69 1 * 530 266 112 75 chr10 13611106 13611576 -126705189 - MLT1G1 LTR MaLR 0 595 20 533 269 103 72 chr10 13611580 13611911 -126704854 - MLT1G1-int LTR MaLR -3 1368 1028 375 373 3 24 chr10 13612573 13612860 -126703905 - MLT1G1-int LTR MaLR -827 544 264 347 258 45 0 chr10 13612924 13613013 -126703752 - MLT1G1 LTR MaLR 0 555 463 574 270 83 49 chr10 13613045 13613249 -126703516 - MLT1G1 LTR MaLR -175 420 210 2152 126 3 10 chr10 13613812 13614122 -126702643 + AluSx SINE Alu 3 310 -2 930 188 0 12 chr10 13615479 13615644 -126701121 + FRAM SINE Alu 4 166 0 315 263 51 51 chr10 13615657 13615794 -126700971 - MIR SINE MIR -48 214 78 2714 101 0 8 chr10 13615988 13616355 -126700410 + THE1B LTR MaLR 1 364 0 35113 59 1 3 chr10 13617168 13622415 -126694350 + L1PA5 LINE L1 912 6152 -2 1264 128 6 0 chr10 13622415 13622595 -126694170 + LTR10E LTR ERV1 453 633 0 733 248 78 9 chr10 13622637 13622855 -126693910 + LTR10E-int LTR ERV1 50 282 -6367 2622 128 12 22 chr10 13623111 13623525 -126693240 - MER4E LTR ERV1 -369 410 1 2867 128 27 15 chr10 13623822 13624300 -126692465 + LTR8 LTR ERV1 1 484 -207 363 269 8 15 chr10 13624348 13624482 -126692283 - LTR8 LTR ERV1 -27 664 532 768 155 7 14 chr10 13624909 13625057 -126691708 + MER61-int LTR ERV1 1935 2081 -3136 2387 101 3 0 chr10 13625057 13625363 -126691402 + AluSp SINE Alu 1 307 -6 590 250 92 44 chr10 13625405 13625677 -126691088 + MLT1L LTR MaLR 321 605 -10 227 257 81 0 chr10 13625687 13625761 -126691004 - MIR SINE MIR -112 150 71 696 248 103 92 chr10 13625816 13626349 -126690416 + MER34 LTR ERV1 1 539 -3 3604 251 77 23 chr10 13628160 13628857 -126687908 + L1M3c LINE L1 2136 2794 -4771 2214 121 0 0 chr10 13628857 13629154 -126687611 + AluSg SINE Alu 1 297 -13 297 51 0 0 chr10 13629155 13629194 -126687571 + (CA)n Simple_repeat Simple_repeat 2 40 0 3604 251 77 23 chr10 13629194 13630018 -126686747 + L1M3c LINE L1 2793 3602 -3963 2024 144 29 41 chr10 13630016 13630643 -126686122 + L1MA7 LINE L1 5231 5819 -493 * 70 13 0 0 chr10 13630650 13630727 -126686038 + AT_rich Low_complexity Low_complexity 1 77 0 1028 125 0 24 chr10 13630729 13630897 -126685868 + L1MA7 LINE L1 5803 5966 -325 512 261 8 0 chr10 13631129 13631248 -126685517 + L1MA7 LINE L1 5980 6099 -192 349 167 222 0 chr10 13631298 13631370 -126685395 + Tigger5 DNA MER2_type 2234 2321 -2 936 150 44 0 chr10 13631370 13631550 -126685215 + L1MA8 LINE L1 6101 6288 -3 2145 98 7 36 chr10 13631565 13631872 -126684893 + AluSx SINE Alu 1 298 -14 2225 106 0 10 chr10 13632653 13632955 -126683810 - AluSg SINE Alu -11 299 1 2032 127 3 3 chr10 13633502 13633812 -126682953 + AluSq SINE Alu 1 310 0 248 255 163 1 chr10 13633860 13633988 -126682777 + MIR SINE MIR 8 152 -56 202 333 0 0 chr10 13634046 13634112 -126682653 - L2 LINE L2 -18 3254 3189 182 295 121 68 chr10 13635849 13636039 -126680726 - MIR SINE MIR -7 255 56 228 67 0 0 chr10 13637253 13637283 -126679482 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 994 190 39 0 chr10 13637670 13637849 -126678916 + L1MC1 LINE L1 5992 6177 -156 2187 135 0 3 chr10 13637960 13638271 -126678494 + AluSx SINE Alu 1 310 -2 242 116 23 0 chr10 13638273 13638316 -126678449 + GA-rich Low_complexity Low_complexity 1 44 0 2254 110 7 7 chr10 13638988 13639287 -126677478 - AluSx SINE Alu -13 299 1 207 0 0 0 chr10 13639519 13639542 -126677223 + (GA)n Simple_repeat Simple_repeat 2 24 0 455 213 9 9 chr10 13639842 13639950 -126676815 + MER4A LTR ERV1 1 108 -556 538 166 74 162 chr10 13640035 13640264 -126676501 + MER4A LTR ERV1 140 348 -316 519 183 50 124 chr10 13640297 13640364 -126676401 + MER4C LTR ERV1 275 345 -120 1597 170 76 0 chr10 13640364 13640640 -126676125 - AluJo SINE Alu -15 297 1 519 183 50 124 chr10 13640640 13640774 -126675991 + MER4C LTR ERV1 345 461 -4 279 246 14 0 chr10 13641023 13641092 -126675673 + MIR3 SINE MIR 135 204 -4 840 167 0 0 chr10 13642008 13642140 -126674625 - FLAM_C SINE Alu -1 132 1 2146 113 10 19 chr10 13642145 13642456 -126674309 - AluSq SINE Alu -5 308 1 2358 101 7 3 chr10 13642813 13643120 -126673645 + AluSc SINE Alu 1 308 -1 1462 174 80 27 chr10 13643125 13643472 -126673293 + L1MB1 LINE L1 5799 6168 0 2442 101 3 0 chr10 13643480 13643786 -126672979 + AluSx SINE Alu 1 307 -5 1747 163 34 0 chr10 13643798 13644092 -126672673 + AluSx SINE Alu 2 305 -7 198 0 0 0 chr10 13644095 13644117 -126672648 + (TA)n Simple_repeat Simple_repeat 1 22 0 1977 161 6 0 chr10 13644233 13644544 -126672221 + AluSq SINE Alu 1 313 0 654 159 38 6 chr10 13644595 13644739 -126672026 + L1MD2 LINE L1 5293 5440 -730 2153 134 7 3 chr10 13644739 13645045 -126671720 + AluSx SINE Alu 1 307 -5 4282 175 28 17 chr10 13645050 13645974 -126670791 + L1MB7 LINE L1 5193 6125 -59 3045 203 62 7 chr10 13646140 13646816 -126669949 + L1MD2 LINE L1 5417 6129 -230 1591 60 0 15 chr10 13646817 13647017 -126669748 - AluY SINE Alu -11 300 104 285 118 88 29 chr10 13647086 13647154 -126669611 + MADE1 DNA Mariner 1 72 -8 939 218 23 39 chr10 13647167 13647424 -126669341 + L1MD2 LINE L1 6106 6358 -1 2536 68 3 0 chr10 13647436 13647746 -126669019 + AluY SINE Alu 1 311 0 613 320 120 29 chr10 13648787 13649297 -126667468 + L2 LINE L2 2525 3122 -191 2090 129 11 3 chr10 13649297 13649583 -126667182 - AluSx SINE Alu -20 292 5 613 320 120 29 chr10 13649583 13649789 -126666976 + L2 LINE L2 3122 3308 -5 233 57 29 0 chr10 13650335 13650370 -126666395 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2147 111 4 0 chr10 13650384 13650664 -126666101 - AluSx SINE Alu -31 281 1 4259 187 60 26 chr10 13650669 13650913 -126665852 + Charlie1a DNA MER1_type 47 281 -2480 2365 73 0 26 chr10 13650913 13651226 -126665539 + AluY SINE Alu 1 305 -6 4259 187 60 26 chr10 13651226 13651907 -126664858 + Charlie1a DNA MER1_type 281 1004 -451 2035 128 0 52 chr10 13652246 13652575 -126664190 - AluSx SINE Alu 0 312 1 270 246 162 7 chr10 13652899 13653041 -126663724 + L1MC4a LINE L1 5843 6006 -1802 2034 138 3 0 chr10 13653057 13653353 -126663412 + AluSx SINE Alu 9 305 -7 2547 113 11 5 chr10 13653369 13653748 -126663017 + L1PB1 LINE L1 5766 6146 -5 264 300 29 0 chr10 13654224 13654328 -126662437 - MIR SINE MIR -66 142 32 2048 129 0 0 chr10 13655061 13655364 -126661401 + AluSx SINE Alu 5 307 0 2307 112 0 3 chr10 13655733 13656037 -126660728 + AluSx SINE Alu 1 303 -9 2106 148 0 0 chr10 13656170 13656475 -126660290 - AluSx SINE Alu -7 305 1 2194 100 0 0 chr10 13657272 13657551 -126659214 - AluSx SINE Alu -15 297 19 2105 116 33 3 chr10 13657699 13658028 -126658737 + L1PA15 LINE L1 5827 6165 0 306 237 13 122 chr10 13658657 13658760 -126658005 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13658760 13658951 -126657814 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13658951 13659003 -126657762 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13659781 13659886 -126656879 + MIR SINE MIR 47 151 -111 2210 116 0 3 chr10 13659888 13660181 -126656584 + AluSx SINE Alu 1 292 -20 192 341 47 47 chr10 13661662 13661791 -126654974 - MIR SINE MIR -118 144 16 32 67 0 0 chr10 13662494 13662554 -126654211 + GC_rich Low_complexity Low_complexity 1 60 0 222 183 14 56 chr10 13662713 13662784 -126653981 + G-rich Low_complexity Low_complexity 5 72 0 1708 148 37 10 chr10 13663302 13663599 -126653166 - AluJb SINE Alu -3 309 5 1650 170 52 59 chr10 13663634 13664022 -126652743 - MLT1B LTR MaLR -2 388 4 776 269 26 4 chr10 13664156 13664383 -126652382 - MIR SINE MIR -24 238 7 8261 283 53 24 chr10 13664906 13667589 -126649176 - ERVL LTR ERVL -814 4950 2192 1278 285 109 44 chr10 13667597 13668305 -126648460 - ERVL LTR ERVL -3773 1881 1128 603 231 209 0 chr10 13669428 13669610 -126647155 + L1MC4 LINE L1 6460 6679 -1363 4551 203 93 26 chr10 13669668 13670889 -126645876 + L1ME1 LINE L1 3942 5346 -820 2256 122 0 0 chr10 13670889 13671193 -126645572 + AluSx SINE Alu 1 304 -8 4551 203 93 26 chr10 13671193 13671739 -126645026 + L1ME1 LINE L1 5346 5854 -312 2316 109 0 3 chr10 13671823 13672125 -126644640 + AluSg SINE Alu 1 301 -9 6387 158 18 15 chr10 13672131 13673519 -126643246 + L1PA13 LINE L1 4162 5546 -619 1017 114 0 0 chr10 13673569 13673709 -126643056 + AluSg/x SINE Alu 159 298 -14 600 177 8 16 chr10 13673710 13673834 -126642931 + L1PA13 LINE L1 6027 6149 -14 1808 207 106 61 chr10 13674044 13674793 -126641972 + L1MC4 LINE L1 6690 7404 -455 2209 126 3 0 chr10 13674793 13675095 -126641670 + AluSx SINE Alu 2 304 -8 2452 88 10 0 chr10 13675095 13675402 -126641363 + AluY SINE Alu 1 311 0 1808 207 106 61 chr10 13675402 13675679 -126641086 + L1MC4 LINE L1 7403 7858 -1 228 328 39 16 chr10 13676389 13676517 -126640248 - MIR SINE MIR -21 241 111 1591 134 17 10 chr10 13676730 13677021 -126639744 + L1MA2 LINE L1 6011 6303 -1 21 0 0 0 chr10 13677022 13677043 -126639722 + AT_rich Low_complexity Low_complexity 1 21 0 259 323 47 33 chr10 13677432 13677613 -126639152 - MIR3 SINE MIR -64 144 15 2355 122 0 0 chr10 13678156 13678468 -126638297 + AluSx SINE Alu 1 312 0 319 281 73 0 chr10 13678643 13678725 -126638040 - L2 LINE L2 -32 3281 3194 2085 125 0 20 chr10 13679571 13679874 -126636891 + AluSq SINE Alu 1 297 -16 2375 57 0 4 chr10 13679874 13680183 -126636582 + AluY SINE Alu 1 308 0 2064 113 3 3 chr10 13680636 13680950 -126635815 + AluSq SINE Alu 1 314 0 243 61 0 0 chr10 13681885 13681918 -126634847 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1907 154 0 28 chr10 13683228 13683547 -126633218 - AluJb SINE Alu -2 310 1 315 177 0 0 chr10 13684164 13684226 -126632539 + (TG)n Simple_repeat Simple_repeat 2 63 0 2646 50 0 0 chr10 13684244 13684546 -126632219 + AluY SINE Alu 1 302 -9 247 125 62 0 chr10 13684686 13684734 -126632031 + L1MB7 LINE L1 6133 6183 -1 213 177 15 116 chr10 13685527 13685725 -126631040 + (CGGGG)n Simple_repeat Simple_repeat 2 179 0 * 477 216 28 44 chr10 13685585 13685766 -126630999 + G-rich Low_complexity Low_complexity 1 178 0 388 247 5 54 chr10 13685846 13686032 -126630733 + G-rich Low_complexity Low_complexity 1 177 0 268 177 44 35 chr10 13685976 13686089 -126630676 + (CGCGG)n Simple_repeat Simple_repeat 1 114 0 * 28 71 0 0 chr10 13686148 13686204 -126630561 + GC_rich Low_complexity Low_complexity 1 56 0 273 228 0 0 chr10 13686209 13686288 -126630477 + G-rich Low_complexity Low_complexity 5 83 0 292 226 16 0 chr10 13687056 13687118 -126629647 + L2 LINE L2 3184 3246 -26 1812 155 35 3 chr10 13687560 13687681 -126629084 + AluSx SINE Alu 4 120 -192 216 0 0 0 chr10 13687681 13687705 -126629060 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1812 155 35 3 chr10 13687705 13687873 -126628892 + AluSx SINE Alu 120 302 -10 1198 137 0 6 chr10 13688075 13688250 -126628515 + MER41C LTR ERV1 1 174 -380 4570 90 9 26 chr10 13688252 13688719 -126628046 + LTR10E LTR ERV1 1 456 -177 11032 41 0 3 chr10 13688719 13690817 -126625948 + L1PA5 LINE L1 4058 6154 0 4570 90 9 26 chr10 13690817 13690993 -126625772 + LTR10E LTR ERV1 456 633 0 840 238 71 8 chr10 13691016 13691256 -126625509 + LTR10E-int LTR ERV1 28 282 -6367 346 213 64 32 chr10 13691494 13691588 -126625177 + LTR10E-int LTR ERV1 975 1071 -5578 261 152 51 0 chr10 13691595 13691674 -126625091 + LTR10E-int LTR ERV1 840 922 -5974 246 164 0 0 chr10 13691988 13692043 -126624722 + GA-rich Low_complexity Low_complexity 2 56 0 1564 106 27 3 chr10 13692097 13692392 -126624373 + LTR10E-int LTR ERV1 1919 2909 -2393 2532 153 38 3 chr10 13692979 13693467 -126623298 + LTR10E-int LTR ERV1 2608 4796 -1853 3150 215 5 12 chr10 13693508 13693820 -126622945 + LTR10E-int LTR ERV1 3375 3683 -3213 7065 112 16 5 chr10 13693820 13694816 -126621949 - LTR13 LTR ERVK 0 1007 1 3150 215 5 12 chr10 13694816 13695076 -126621689 + LTR10E-int LTR ERV1 3683 3943 -2953 381 240 0 10 chr10 13695072 13695172 -126621593 + LTR10E-int LTR ERV1 6550 6648 -1 * 4742 73 5 17 chr10 13695174 13695814 -126620951 + LTR10E LTR ERV1 2 633 0 2210 128 48 29 chr10 13695814 13696067 -126620698 + MER41C LTR ERV1 172 436 -118 2142 109 6 10 chr10 13696067 13696380 -126620385 - AluSp SINE Alu -1 312 1 2210 128 48 29 chr10 13696380 13696502 -126620263 + MER41C LTR ERV1 436 554 0 224 255 20 0 chr10 13697206 13697257 -126619508 - L2 LINE L2 -1384 1930 1879 2103 136 0 0 chr10 13697478 13697786 -126618979 + AluSx SINE Alu 1 308 -4 2062 91 35 0 chr10 13698252 13698539 -126618226 - AluY SINE Alu -14 297 1 2372 70 3 0 chr10 13698916 13699214 -126617551 + AluSp SINE Alu 1 299 -14 575 277 169 0 chr10 13699759 13699925 -126616840 - MER91A DNA MER1_type 0 196 3 1938 112 51 0 chr10 13700534 13700829 -126615936 + AluSx SINE Alu 1 310 -2 440 45 149 0 chr10 13701151 13701218 -126615547 + AluY SINE Alu 226 302 -9 1970 105 21 0 chr10 13701221 13701507 -126615258 - AluSx SINE Alu -18 294 3 2077 128 0 0 chr10 13702679 13702975 -126613790 - AluSx SINE Alu -16 296 1 247 307 13 0 chr10 13703147 13703222 -126613543 + MIR SINE MIR 69 144 -64 975 132 0 0 chr10 13703503 13703639 -126613126 + AluSx SINE Alu 2 137 -175 1250 126 5 0 chr10 13704162 13704353 -126612412 + AluSx SINE Alu 121 312 0 294 73 0 0 chr10 13704830 13704871 -126611894 + (TG)n Simple_repeat Simple_repeat 2 42 0 434 320 107 39 chr10 13704949 13705230 -126611535 - L3 LINE CR1 -20 1557 1258 264 337 47 58 chr10 13705516 13705633 -126611132 + L2 LINE L2 2416 2532 -782 2122 119 0 10 chr10 13705633 13705943 -126610822 - AluSx SINE Alu -5 307 1 264 337 47 58 chr10 13705943 13706015 -126610750 + L2 LINE L2 2532 2603 -711 * 533 250 0 37 chr10 13706009 13706145 -126610620 + L2 LINE L2 3179 3309 -4 194 388 16 8 chr10 13706387 13706508 -126610257 + L2 LINE L2 2914 3035 -237 264 85 0 43 chr10 13706636 13706683 -126610082 + L2 LINE L2 3227 3271 -1 28 71 0 0 chr10 13706944 13707000 -126609765 + AT_rich Low_complexity Low_complexity 1 56 0 269 348 146 33 chr10 13708919 13709115 -126607650 + L2 LINE L2 1971 2143 -1171 2887 97 39 9 chr10 13709115 13709465 -126607300 - L1PB1 LINE L1 0 6151 5813 429 76 0 0 chr10 13709465 13709531 -126607234 + (TA)n Simple_repeat Simple_repeat 2 67 0 1830 127 6 44 chr10 13709536 13709851 -126606914 - AluSc SINE Alu -6 303 1 2887 97 39 9 chr10 13709851 13709927 -126606838 - L1PB1 LINE L1 -341 5810 5706 269 348 146 33 chr10 13709927 13710092 -126606673 + L2 LINE L2 2143 2373 -941 2033 146 39 33 chr10 13710122 13710202 -126606563 + MLT1A1 LTR MaLR 1 79 -286 2044 203 59 67 chr10 13710202 13710758 -126606007 - MLT2B3 LTR ERVL -2 552 1 2033 146 39 33 chr10 13710758 13711040 -126605725 + MLT1A1 LTR MaLR 79 365 0 2447 88 36 36 chr10 13712568 13712932 -126603833 - THE1B LTR MaLR 0 364 1 212 279 38 51 chr10 13713051 13713130 -126603635 - MIR3 SINE MIR -25 183 106 351 0 0 0 chr10 13713703 13713742 -126603023 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1908 98 8 0 chr10 13713748 13714003 -126602762 - AluSc SINE Alu -52 257 1 1803 154 0 0 chr10 13714165 13714445 -126602320 + AluJb SINE Alu 17 296 -16 570 181 0 19 chr10 13714682 13714787 -126601978 - L1M3 LINE L1 -492 5688 5586 2069 151 12 12 chr10 13714932 13715269 -126601496 - MER1B DNA MER1_type 0 337 1 880 235 50 32 chr10 13715317 13715598 -126601167 - L1MB8 LINE L1 -7 6171 5886 440 138 0 11 chr10 13715668 13715741 -126601024 + (TTCC)n Simple_repeat Simple_repeat 3 76 -12 1799 144 47 3 chr10 13715741 13716040 -126600725 - AluSx SINE Alu 0 312 1 440 138 0 11 chr10 13716040 13716053 -126600712 + (TTCC)n Simple_repeat Simple_repeat 76 88 0 241 257 14 27 chr10 13716899 13716973 -126599792 - MIR SINE MIR -28 234 162 460 292 26 47 chr10 13716989 13717010 -126599755 - MER46C DNA MER2_type -13 325 305 1977 141 0 0 chr10 13717010 13717308 -126599457 + AluSx SINE Alu 1 298 -14 460 292 26 47 chr10 13717308 13717519 -126599246 - MER46C DNA MER2_type -33 305 98 388 247 0 0 chr10 13717563 13717648 -126599117 - MIR SINE MIR -108 154 70 827 200 12 0 chr10 13717873 13718043 -126598722 - AluJb SINE Alu -1 311 140 2380 84 0 0 chr10 13718284 13718594 -126598171 - AluSg SINE Alu 0 310 1 610 96 19 10 chr10 13718931 13719035 -126597730 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2245 59 0 10 chr10 13719861 13720151 -126596614 - AluY SINE Alu -24 287 1 1203 187 0 9 chr10 13720187 13720412 -126596353 - AluJo SINE Alu -89 223 1 1917 131 0 13 chr10 13721030 13721328 -126595437 - AluSx SINE Alu -18 294 1 1624 155 0 31 chr10 13721778 13722068 -126594697 + AluJb SINE Alu 1 281 -31 233 57 29 0 chr10 13722082 13722117 -126594648 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 754 322 120 29 chr10 13722663 13722869 -126593896 - L2 LINE L2 -5 3308 3122 1901 130 14 3 chr10 13722869 13723153 -126593612 + AluSx SINE Alu 5 291 -21 754 322 120 29 chr10 13723153 13723663 -126593102 - L2 LINE L2 -191 3122 2525 284 67 0 0 chr10 13724714 13724759 -126592006 - Alu SINE Alu 0 300 256 2205 103 0 0 chr10 13725490 13725792 -126590973 - AluSc SINE Alu -7 302 1 199 244 73 106 chr10 13726176 13726299 -126590466 - L2 LINE L2 -1 3312 3194 262 139 28 0 chr10 13727277 13727349 -126589416 + (TA)n Simple_repeat Simple_repeat 1 74 0 2505 50 0 0 chr10 13728764 13729063 -126587702 - AluY SINE Alu -12 299 1 2125 114 0 3 chr10 13729123 13729430 -126587335 - AluSx SINE Alu -6 306 1 253 217 0 0 chr10 13730754 13730768 -126585997 - L1MA10 LINE L1 0 6334 6321 3796 171 40 20 chr10 13730768 13731656 -126585109 - L1MB5 LINE L1 -5 6161 5227 2557 38 0 19 chr10 13731656 13731971 -126584794 - AluY SINE Alu -2 309 1 3796 171 40 20 chr10 13731971 13732183 -126584582 - L1MB5 LINE L1 -939 5227 5021 472 119 12 60 chr10 13732189 13732273 -126584492 + AluS SINE Alu 220 299 -11 764 156 20 193 chr10 13732273 13732460 -126584305 - L1MB5 LINE L1 -1112 5034 4816 2099 118 26 45 chr10 13732460 13732840 -126583925 - THE1C LTR MaLR 0 375 3 764 156 20 193 chr10 13732840 13733112 -126583653 - L1MB5 LINE L1 -1330 4816 4532 654 213 37 69 chr10 13733087 13733275 -126583490 - L1MB5 LINE L1 -1909 4237 4056 * 863 294 96 0 chr10 13733278 13733571 -126583194 - HAL1 LINE L1 -2179 328 8 2205 103 0 0 chr10 13734357 13734659 -126582106 - AluSc SINE Alu -7 302 1 222 206 39 118 chr10 13735041 13735143 -126581622 - L2 LINE L2 0 3313 3220 285 309 135 29 chr10 13736410 13736617 -126580148 + MIR SINE MIR 5 233 -29 2647 13 0 0 chr10 13737964 13738264 -126578501 - AluY SINE Alu -11 300 1 1761 157 20 0 chr10 13738430 13738730 -126578035 + AluJb SINE Alu 1 306 -6 776 202 0 0 chr10 13738836 13738965 -126577800 - FLAM_C SINE Alu -3 130 2 603 113 160 0 chr10 13739225 13739331 -126577434 - FLAM_C SINE Alu -10 123 1 1540 202 67 35 chr10 13739757 13740218 -126576547 - L1ME LINE L1 -394 5770 5295 2145 110 0 0 chr10 13740236 13740526 -126576239 - AluSx SINE Alu -22 290 1 1265 278 37 7 chr10 13740591 13741027 -126575738 - L1ME LINE L1 -941 5205 4757 1961 98 61 0 chr10 13741040 13741317 -126575448 - AluSc SINE Alu -15 294 1 22 0 0 0 chr10 13741490 13741512 -126575253 + AT_rich Low_complexity Low_complexity 1 22 0 188 245 0 20 chr10 13741779 13741828 -126574937 - L2 LINE L2 -2 3311 3264 2063 99 0 3 chr10 13741828 13742110 -126574655 + AluSg SINE Alu 1 281 -29 487 296 15 27 chr10 13742116 13742345 -126574420 + CT-rich Low_complexity Low_complexity 1 226 0 23 78 0 0 chr10 13742734 13742785 -126573980 + AT_rich Low_complexity Low_complexity 1 51 0 32 26 0 0 chr10 13742925 13742964 -126573801 + AT_rich Low_complexity Low_complexity 1 39 0 928 193 0 6 chr10 13742970 13743131 -126573634 - FRAM SINE Alu -6 160 1 308 125 0 0 chr10 13743135 13743183 -126573582 - AluSq/x SINE Alu -169 133 86 * 1575 191 17 7 chr10 13743178 13743466 -126573299 - MLT1F LTR MaLR -251 291 1 197 348 35 9 chr10 13743575 13743690 -126573075 + MIR SINE MIR 132 249 -13 424 135 0 14 chr10 13744340 13744414 -126572351 + AluJ/FRAM SINE Alu 228 300 -12 1101 139 0 6 chr10 13744565 13744723 -126572042 - AluJb SINE Alu -14 298 142 2211 134 0 0 chr10 13746039 13746345 -126570420 - AluSx SINE Alu -6 306 1 2211 109 16 0 chr10 13746661 13746964 -126569801 - AluSx SINE Alu -4 308 1 635 86 0 0 chr10 13746966 13747047 -126569718 - AluSq/x SINE Alu -182 131 51 1793 160 3 7 chr10 13748161 13748454 -126568311 + AluJo SINE Alu 20 311 -1 2383 93 7 0 chr10 13748464 13748766 -126567999 + AluSg SINE Alu 1 304 -6 202 163 61 0 chr10 13749221 13749234 -126567531 + GA-rich Low_complexity Low_complexity 3 14 -40 2116 133 3 0 chr10 13749234 13749535 -126567230 + AluSx SINE Alu 1 302 -10 202 163 61 0 chr10 13749535 13749570 -126567195 + GA-rich Low_complexity Low_complexity 14 54 0 23 0 0 0 chr10 13749647 13749670 -126567095 + AT_rich Low_complexity Low_complexity 1 23 0 500 255 7 21 chr10 13751150 13751295 -126565470 - L1MB1 LINE L1 -6 6162 6020 843 182 48 18 chr10 13751652 13751817 -126564948 - AluJo SINE Alu -127 185 16 2145 245 126 10 chr10 13751817 13752759 -126564006 - L1M4c LINE L1 -4516 1375 388 315 259 21 70 chr10 13752944 13753087 -126563678 - L1M4c LINE L1 -5507 384 249 232 333 43 26 chr10 13753169 13753286 -126563479 - L1M3d LINE L1 -5253 638 520 1058 309 63 40 chr10 13753352 13753969 -126562796 - L1M3d LINE L1 -5207 684 15 2356 97 3 3 chr10 13754408 13754708 -126562057 + AluSx SINE Alu 1 300 -12 1967 143 3 31 chr10 13755282 13755603 -126561162 + AluSx SINE Alu 1 312 0 23 68 0 0 chr10 13755621 13755665 -126561100 + AT_rich Low_complexity Low_complexity 1 44 0 5573 170 63 132 chr10 13755681 13757534 -126559231 + L1MC2 LINE L1 44 1881 -4545 3275 212 58 45 chr10 13757539 13757783 -126558982 + L1MC2 LINE L1 2251 2490 -3936 2323 117 0 0 chr10 13757783 13758090 -126558675 + AluSg SINE Alu 1 307 -3 3275 212 58 45 chr10 13758090 13758419 -126558346 + L1MC2 LINE L1 2490 2813 -3613 1575 190 23 72 chr10 13758419 13758809 -126557956 + MLT1A2 LTR MaLR 4 374 0 3275 212 58 45 chr10 13758809 13758896 -126557869 + L1MC2 LINE L1 2813 2897 -3529 2288 135 76 22 chr10 13758896 13759010 -126557755 - MSTB1 LTR MaLR 0 432 326 1989 143 28 0 chr10 13759010 13759297 -126557468 - AluSx SINE Alu -17 295 1 2288 135 76 22 chr10 13759297 13759589 -126557176 - MSTB1 LTR MaLR -106 326 4 3275 212 58 45 chr10 13759589 13759855 -126556910 + L1MC2 LINE L1 2897 3158 -3268 1869 129 17 17 chr10 13759855 13760142 -126556623 + AluSx SINE Alu 1 287 -25 294 29 0 0 chr10 13760142 13760177 -126556588 + (TA)n Simple_repeat Simple_repeat 1 35 0 3275 212 58 45 chr10 13760177 13760542 -126556223 + L1MC2 LINE L1 3157 3558 -2868 2285 229 29 24 chr10 13760587 13760704 -126556061 + L1MC2 LINE L1 4648 4763 -1663 2422 100 0 0 chr10 13760704 13761013 -126555752 + AluSq SINE Alu 1 309 -4 2285 229 29 24 chr10 13761013 13761518 -126555247 + L1MC2 LINE L1 4763 5273 -1153 * 3748 125 21 22 chr10 13761514 13761633 -126555132 + L1MC2 LINE L1 5482 5600 -1024 1774 172 14 3 chr10 13761633 13761929 -126554836 + AluJo SINE Alu 1 299 -13 3748 125 21 22 chr10 13761929 13762473 -126554292 + L1MC2 LINE L1 5600 6144 -480 483 115 58 23 chr10 13762473 13762560 -126554205 - LTR49 LTR ERV1 0 595 506 2568 63 3 0 chr10 13762560 13762862 -126553903 + AluSp SINE Alu 1 303 -10 234 0 0 0 chr10 13762862 13762888 -126553877 + (TA)n Simple_repeat Simple_repeat 2 27 0 1610 79 4 109 chr10 13763379 13763645 -126553120 + AluSp SINE Alu 66 303 -10 234 0 0 0 chr10 13763645 13763671 -126553094 + (TA)n Simple_repeat Simple_repeat 2 27 0 1394 152 105 50 chr10 13764013 13764290 -126552475 + AluJb SINE Alu 1 292 -20 2399 109 3 0 chr10 13764634 13764945 -126551820 + AluSx SINE Alu 1 312 0 2187 134 109 14 chr10 13764990 13765395 -126551370 - MER61C LTR ERV1 0 434 6 29760 117 55 37 chr10 13765395 13768536 -126548229 - MER61C-int LTR ERV1 -4 5213 1936 2407 69 3 3 chr10 13768536 13768826 -126547939 - AluSp SINE Alu -23 290 1 29760 117 55 37 chr10 13768826 13770799 -126545966 - MER61C-int LTR ERV1 -3281 1936 2 2113 125 115 18 chr10 13770799 13771183 -126545582 - MER61C LTR ERV1 0 434 14 228 240 0 0 chr10 13771150 13771200 -126545565 - LTR28 LTR ERV1 -958 62 13 * 915 193 6 6 chr10 13771476 13771637 -126545128 + AluJb SINE Alu 133 293 -19 398 316 33 7 chr10 13771637 13771789 -126544976 - MER5A DNA MER1_type -32 157 2 220 284 147 0 chr10 13771871 13771980 -126544785 - L2 LINE L2 0 3313 3189 478 139 9 102 chr10 13772717 13772825 -126543940 + MER4A LTR ERV1 1 98 -566 1851 118 5 57 chr10 13772825 13772995 -126543770 + MER4A LTR ERV1 261 438 -226 1585 96 0 18 chr10 13772995 13773213 -126543552 - AluY SINE Alu -12 299 86 1851 118 5 57 chr10 13773213 13773407 -126543358 + MER4A LTR ERV1 438 664 0 191 222 63 0 chr10 13773480 13773543 -126543222 + MIR SINE MIR 126 192 -70 2179 106 6 13 chr10 13773577 13773888 -126542877 + AluSc SINE Alu 1 309 0 402 290 32 8 chr10 13774143 13774267 -126542498 + MIR SINE MIR 26 152 -110 1851 89 0 0 chr10 13774507 13774743 -126542022 - LTR8 LTR ERV1 0 691 456 375 22 0 0 chr10 13774744 13774789 -126541976 - LTR8 LTR ERV1 -192 499 455 3385 87 26 14 chr10 13774789 13775282 -126541483 - LTR8 LTR ERV1 -192 499 1 4836 131 18 25 chr10 13775579 13776364 -126540401 + MER4E LTR ERV1 1 779 0 218 232 58 0 chr10 13776671 13776740 -126540025 - MIR SINE MIR -70 192 120 223 367 54 31 chr10 13776845 13776998 -126539767 + L2 LINE L2 1814 1962 -1352 1975 134 0 4 chr10 13776998 13777275 -126539490 + AluJo SINE Alu 6 281 -31 223 367 54 31 chr10 13777275 13777470 -126539295 + L2 LINE L2 1962 2170 -1144 198 0 0 0 chr10 13777626 13777648 -126539117 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2177 89 17 0 chr10 13777698 13777990 -126538775 - AluSc SINE Alu -12 297 1 564 233 60 84 chr10 13778385 13778634 -126538131 - MLT1J1 LTR MaLR -22 424 182 324 227 100 9 chr10 13778785 13778895 -126537870 + MIR SINE MIR 113 232 -30 2169 103 0 10 chr10 13779909 13780200 -126536565 - AluSg SINE Alu -22 288 1 1886 137 17 17 chr10 13780489 13780788 -126535977 - AluJo SINE Alu -13 299 1 257 200 362 29 chr10 13780791 13780896 -126535869 - MIR3 SINE MIR -60 148 9 1036 261 114 19 chr10 13781350 13781710 -126535055 + MLT1J1 LTR MaLR 9 402 -44 623 204 138 22 chr10 13782110 13782183 -126534582 + MLT1H LTR MaLR 3 66 -483 1680 153 29 7 chr10 13782183 13782464 -126534301 + AluJo SINE Alu 11 297 -15 623 204 138 22 chr10 13782464 13782656 -126534109 + MLT1H LTR MaLR 66 310 -239 2057 128 3 0 chr10 13782831 13783119 -126533646 + AluSq SINE Alu 1 289 -24 195 100 0 0 chr10 13783119 13783149 -126533616 + (GGAGA)n Simple_repeat Simple_repeat 2 31 0 403 191 0 24 chr10 13783152 13783236 -126533529 - LTR24B LTR ERV1 -491 85 4 256 277 0 15 chr10 13783285 13783350 -126533415 - L2 LINE L2 -86 3186 3123 1845 130 3 37 chr10 13783617 13783917 -126532848 - AluSx SINE Alu -4 308 19 1834 154 48 3 chr10 13784219 13784511 -126532254 - AluJo SINE Alu -7 305 1 234 200 0 20 chr10 13784747 13784797 -126531968 + Charlie7 DNA MER1_type 39 87 -2525 528 16 0 0 chr10 13784798 13784859 -126531906 + (TG)n Simple_repeat Simple_repeat 1 61 0 1955 136 7 14 chr10 13784859 13785138 -126531627 - AluSx SINE Alu -33 279 3 505 164 39 0 chr10 13785151 13785255 -126531510 - L1MB1 LINE L1 0 6168 6061 1802 169 7 0 chr10 13785421 13785705 -126531060 - AluJo SINE Alu -26 286 1 1721 138 17 38 chr10 13786721 13787010 -126529755 + AluJo SINE Alu 15 297 -15 2460 97 0 0 chr10 13787039 13787347 -126529418 + AluSg SINE Alu 1 308 -2 2631 114 76 36 chr10 13789275 13789305 -126527460 + MER4C LTR ERV1 1 28 -437 2255 97 0 7 chr10 13789305 13789594 -126527171 + AluSc SINE Alu 1 287 -22 2631 114 76 36 chr10 13789594 13790010 -126526755 + MER4C LTR ERV1 28 465 0 347 207 182 16 chr10 13790229 13790350 -126526415 + MER103 DNA DNA 18 158 -8 532 258 84 91 chr10 13790518 13790816 -126525949 + Charlie2 DNA MER1_type 4 299 -2563 2225 196 119 50 chr10 13790847 13791060 -126525705 + Charlie2 DNA MER1_type 1856 2053 -809 2329 87 16 13 chr10 13791060 13791372 -126525393 - AluSq SINE Alu 0 313 1 2028 149 0 0 chr10 13791372 13791673 -126525092 - AluJo SINE Alu -11 301 1 1954 128 0 7 chr10 13791680 13791988 -126524777 - AluSg SINE Alu 0 310 1 2225 196 119 50 chr10 13791988 13792158 -126524607 + Charlie2 DNA MER1_type 2058 2215 -647 1702 136 75 4 chr10 13792158 13792438 -126524327 - AluSc SINE Alu -9 300 1 2225 196 119 50 chr10 13792438 13792840 -126523925 + Charlie2 DNA MER1_type 2215 2706 -156 5101 166 64 7 chr10 13792843 13794173 -126522592 + L1PA16 LINE L1 4488 5933 -233 2004 134 0 6 chr10 13794173 13794486 -126522279 - AluSx SINE Alu -1 311 1 5101 166 64 7 chr10 13794486 13794725 -126522040 + L1PA16 LINE L1 5933 6157 -9 482 203 41 8 chr10 13794733 13794856 -126521909 + Charlie2 DNA MER1_type 2687 2813 -49 2472 48 7 3 chr10 13794858 13795168 -126521597 - AluY SINE Alu 0 311 1 378 355 16 0 chr10 13795591 13795712 -126521053 - MIR SINE MIR -126 136 14 721 113 0 0 chr10 13795869 13795966 -126520799 + AluS SINE Alu 2 98 -215 1804 98 144 0 chr10 13796007 13796271 -126520494 + AluSx SINE Alu 1 302 0 288 0 0 0 chr10 13797055 13797087 -126519678 + (TG)n Simple_repeat Simple_repeat 1 32 0 1745 132 57 0 chr10 13797087 13797352 -126519413 - AluSq SINE Alu -33 280 1 232 280 90 30 chr10 13797847 13797947 -126518818 - MER20B DNA MER1_type -614 169 64 181 321 18 0 chr10 13798024 13798080 -126518685 - MIR SINE MIR -77 131 75 2009 94 0 24 chr10 13798339 13798627 -126518138 - AluSx SINE Alu -17 295 15 2575 95 52 5 chr10 13799387 13799775 -126516990 - L1PA11 LINE L1 0 6174 5769 789 163 0 59 chr10 13799960 13800095 -126516670 - FLAM_C SINE Alu -6 127 1 455 308 98 55 chr10 13800135 13800574 -126516191 + L1MC5 LINE L1 7395 7852 -109 1542 181 35 17 chr10 13800690 13800978 -126515787 + AluJb SINE Alu 1 293 -19 2212 110 0 0 chr10 13800988 13801297 -126515468 + AluSx SINE Alu 1 309 -3 1914 124 3 3 chr10 13801604 13801909 -126514856 - AluSc SINE Alu 0 305 1 216 0 0 0 chr10 13802381 13802405 -126514360 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 118 0 16 chr10 13802716 13803031 -126513734 - AluSx SINE Alu -1 311 2 315 0 0 0 chr10 13803045 13803080 -126513685 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 35001 60 1 2 chr10 13803276 13808522 -126508243 - L1PA5 LINE L1 -1 6153 912 2087 120 7 0 chr10 13809386 13809687 -126507078 - AluSx SINE Alu -9 303 1 2307 72 0 10 chr10 13809916 13810223 -126506542 - AluY SINE Alu -7 304 1 281 299 47 9 chr10 13811017 13811124 -126505641 + L1ME4a LINE L1 5554 5664 -457 3401 190 344 87 chr10 13811338 13811500 -126505265 + L1MA8 LINE L1 1 120 -6930 2536 48 0 0 chr10 13811500 13811811 -126504954 + AluY SINE Alu 1 311 0 3401 190 344 87 chr10 13811811 13812360 -126504405 + L1MA8 LINE L1 120 527 -6523 916 69 0 0 chr10 13812360 13812476 -126504289 - AluSg/x SINE Alu -15 297 182 3401 190 344 87 chr10 13812476 13812548 -126504217 + L1MA8 LINE L1 527 579 -6471 2108 98 17 0 chr10 13812548 13812843 -126503922 - AluSg SINE Alu -10 300 1 3401 190 344 87 chr10 13812843 13813646 -126503119 + L1MA8 LINE L1 579 2133 -4917 * 12876 167 63 12 chr10 13813645 13814247 -126502518 + L1MA8 LINE L1 3587 4157 -3094 1789 147 10 16 chr10 13814247 13814554 -126502211 + AluSx SINE Alu 1 305 -7 12876 167 63 12 chr10 13814554 13817435 -126499330 + L1MA8 LINE L1 4157 7245 -6 503 289 148 30 chr10 13817613 13817986 -126498779 - L2 LINE L2 -5 3308 2892 1967 106 53 0 chr10 13818101 13818384 -126498381 + AluSx SINE Alu 1 298 -14 1792 130 60 3 chr10 13820104 13820389 -126496376 + AluSg SINE Alu 1 301 -9 237 197 171 34 chr10 13820650 13820767 -126495998 + MER103 DNA DNA 33 165 -1 2151 104 3 0 chr10 13821333 13821632 -126495133 - AluSx SINE Alu -11 301 2 347 342 110 57 chr10 13821772 13822126 -126494639 - L2 LINE L2 -3 3269 2897 414 331 34 3 chr10 13822165 13822361 -126494404 - MIR SINE MIR -1 261 61 936 214 77 5 chr10 13823605 13823801 -126492964 - MER58A DNA MER1_type -14 210 1 1780 163 0 7 chr10 13824504 13824811 -126491954 - AluJo SINE Alu -7 305 1 395 289 79 31 chr10 13824923 13825151 -126491614 + L1ME4a LINE L1 5850 6088 -33 182 290 130 22 chr10 13827049 13827187 -126489578 - L2 LINE L2 -277 2995 2843 358 247 31 10 chr10 13827264 13827361 -126489404 - MIR SINE MIR 0 262 164 950 286 40 64 chr10 13827382 13827423 -126489342 - LTR16A LTR ERVL -12 438 398 2154 87 0 19 chr10 13827423 13827732 -126489033 + AluSc SINE Alu 1 303 -6 950 286 40 64 chr10 13827732 13828113 -126488652 - LTR16A LTR ERVL -52 398 26 332 222 10 40 chr10 13828140 13828239 -126488526 - MIR SINE MIR -151 111 16 2279 66 0 41 chr10 13828282 13828599 -126488166 - AluY SINE Alu -7 304 1 2452 122 17 0 chr10 13828766 13829118 -126487647 - THE1B LTR MaLR 0 364 7 676 291 117 7 chr10 13829284 13829593 -126487172 - L1MC4a LINE L1 -1892 5916 5574 528 239 1 39 chr10 13829631 13829797 -126486968 - L1P1 LINE L1 -655 5500 5341 1467 133 26 0 chr10 13832979 13833205 -126483560 + AluSg/x SINE Alu 70 301 -9 574 358 74 39 chr10 13833452 13833561 -126483204 + ERVL LTR ERVL 767 871 -4893 854 212 17 22 chr10 13833561 13833740 -126483025 - MER45A DNA AcHobo 0 178 1 574 358 74 39 chr10 13833740 13834454 -126482311 + ERVL LTR ERVL 871 1619 -4145 411 257 25 20 chr10 13834516 13834761 -126482004 + GA-rich Low_complexity Low_complexity 1 246 0 382 299 34 17 chr10 13834761 13834878 -126481887 + polypurine Low_complexity Low_complexity 1 119 0 195 375 0 0 chr10 13834879 13834935 -126481830 + A-rich Low_complexity Low_complexity 1 56 0 230 360 0 0 chr10 13834936 13834986 -126481779 + G-rich Low_complexity Low_complexity 1 50 0 180 333 0 0 chr10 13834986 13835043 -126481722 + A-rich Low_complexity Low_complexity 1 57 0 1194 181 22 88 chr10 13835551 13835902 -126480863 - LTR29 LTR ERV1 -134 510 137 268 251 0 75 chr10 13835908 13836001 -126480764 - MER34 LTR ERV1 -469 73 3 2301 139 82 13 chr10 13836002 13836454 -126480311 + L1MC2 LINE L1 5860 6342 -2 25 31 0 0 chr10 13836584 13836616 -126480149 + AT_rich Low_complexity Low_complexity 1 32 0 2041 82 3 76 chr10 13836668 13836985 -126479780 - AluSg SINE Alu -16 294 1 1092 110 0 0 chr10 13836985 13837130 -126479635 - AluSq/x SINE Alu -167 145 1 1859 117 24 12 chr10 13837150 13837551 -126479214 + MER4D LTR ERV1 3 482 -421 1852 118 64 4 chr10 13838033 13838313 -126478452 - AluSq SINE Alu -16 297 1 343 248 83 25 chr10 13838714 13838835 -126477930 - MIR SINE MIR -6 256 129 13016 27 1 8 chr10 13838835 13841126 -126475639 + L1PA4 LINE L1 3865 6152 -3 261 164 0 0 chr10 13841134 13841207 -126475558 + (TA)n Simple_repeat Simple_repeat 1 73 0 2439 67 0 3 chr10 13842390 13842702 -126474063 - AluY SINE Alu 0 311 1 233 180 20 20 chr10 13843114 13843164 -126473601 - MER2 DNA MER2_type 0 345 296 203 214 0 32 chr10 13843176 13843302 -126473463 + (CCG)n Simple_repeat Simple_repeat 2 123 0 2126 105 3 9 chr10 13843403 13843718 -126473047 - AluSq SINE Alu 0 313 1 349 302 63 45 chr10 13843881 13844103 -126472662 + L2 LINE L2 2250 2475 -839 369 0 0 0 chr10 13844875 13844916 -126471849 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2132 66 7 42 chr10 13844916 13845204 -126471561 - AluSg SINE Alu -32 278 1 281 253 36 0 chr10 13845857 13845940 -126470825 - MIR3 SINE MIR -41 167 82 23 0 0 0 chr10 13846383 13846406 -126470359 + GC_rich Low_complexity Low_complexity 1 23 0 252 59 0 0 chr10 13846625 13846659 -126470106 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 596 291 81 62 chr10 13847047 13847367 -126469398 - L2 LINE L2 -511 2803 2478 240 159 48 32 chr10 13847464 13847527 -126469238 + L2 LINE L2 3205 3268 -4 2557 38 14 0 chr10 13847538 13847829 -126468936 + AluY SINE Alu 1 295 -16 1714 148 8 4 chr10 13847828 13848092 -126468673 + AluSx SINE Alu 33 297 -15 * 711 200 8 8 chr10 13848446 13848571 -126468194 - AluSq/x SINE Alu -187 126 2 310 216 72 52 chr10 13848691 13848844 -126467921 - L2 LINE L2 -702 2612 2457 326 244 288 0 chr10 13849189 13849349 -126467416 - MIR SINE MIR -27 235 30 873 138 0 31 chr10 13849517 13849647 -126467118 + FLAM_C SINE Alu 1 126 -17 1622 159 61 52 chr10 13849786 13850113 -126466652 - MER44D DNA MER2_type 0 609 10 2211 134 0 3 chr10 13850333 13850646 -126466119 + AluSx SINE Alu 1 312 0 828 302 186 23 chr10 13850814 13851094 -126465671 - L2 LINE L2 -1619 1695 1462 2459 78 3 0 chr10 13851094 13851390 -126465375 + AluSp SINE Alu 1 297 -16 297 75 0 0 chr10 13851390 13851430 -126465335 + (TA)n Simple_repeat Simple_repeat 2 41 0 828 302 186 23 chr10 13851430 13851613 -126465152 - L2 LINE L2 -1852 1462 1310 1557 153 12 12 chr10 13851613 13851861 -126464904 + AluJo SINE Alu 17 264 -48 828 302 186 23 chr10 13851861 13851872 -126464893 - L2 LINE L2 -2004 1310 1302 201 74 0 0 chr10 13851872 13851899 -126464866 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 828 302 186 23 chr10 13851899 13852325 -126464440 - L2 LINE L2 -2012 1302 645 257 278 0 0 chr10 13852494 13852548 -126464217 - L2 LINE L2 -10 3303 3250 186 286 32 0 chr10 13852725 13852788 -126463977 - L2 LINE L2 -3163 151 87 857 277 98 39 chr10 13853345 13853566 -126463199 + L1ME4a LINE L1 5318 5525 -645 1969 212 62 58 chr10 13853566 13854175 -126462590 + LTR9 LTR ERV1 1 612 0 857 277 98 39 chr10 13854175 13854448 -126462317 + L1ME4a LINE L1 5525 5834 -336 2245 104 0 0 chr10 13854448 13854746 -126462019 - AluSx SINE Alu -14 298 1 857 277 98 39 chr10 13854746 13854796 -126461969 + L1ME4a LINE L1 5834 5880 -290 253 194 32 86 chr10 13855023 13855116 -126461649 + L1ME4a LINE L1 5969 6056 -65 213 65 0 0 chr10 13855415 13855446 -126461319 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 652 136 152 30 chr10 13855448 13855580 -126461185 - L1PA16 LINE L1 -9 6157 6010 1784 154 3 33 chr10 13856508 13856814 -126459951 - AluJo SINE Alu -15 297 1 251 196 0 0 chr10 13857541 13857592 -126459173 + (TG)n Simple_repeat Simple_repeat 2 52 0 1211 202 37 4 chr10 13857709 13857952 -126458813 + AluJo SINE Alu 44 294 -18 189 107 0 0 chr10 13858815 13858843 -126457922 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 1858 114 51 4 chr10 13858875 13859148 -126457617 - AluSx SINE Alu -4 308 23 790 226 31 20 chr10 13859305 13859500 -126457265 - MER3 DNA MER1_type -5 204 8 2371 69 21 0 chr10 13859587 13859875 -126456890 + AluSp SINE Alu 1 294 -19 1597 163 58 11 chr10 13859895 13860172 -126456593 + AluJb SINE Alu 4 293 -19 404 143 0 0 chr10 13860821 13860891 -126455874 - L1 LINE L1 -1456 4690 4621 23 0 0 0 chr10 13861077 13861100 -126455665 + AT_rich Low_complexity Low_complexity 1 23 0 1842 172 14 3 chr10 13861355 13861646 -126455119 + AluJo SINE Alu 1 294 -18 1039 144 80 21 chr10 13862065 13862253 -126454512 - MER46A DNA MER2_type 0 236 38 22 0 0 0 chr10 13862253 13862275 -126454490 + AT_rich Low_complexity Low_complexity 1 22 0 346 214 7 44 chr10 13862287 13862330 -126454435 - LTR57 LTR ERVL 0 411 368 1572 168 80 0 chr10 13862330 13862604 -126454161 + AluJb SINE Alu 1 296 -16 346 214 7 44 chr10 13862604 13862701 -126454064 - LTR57 LTR ERVL -43 368 240 5585 135 45 12 chr10 13862705 13862847 -126453918 - L1 LINE L1 -1007 5139 5003 1952 113 35 7 chr10 13862847 13863129 -126453636 - AluSx SINE Alu -22 290 1 5585 135 45 12 chr10 13863129 13863969 -126452796 - L1 LINE L1 -1143 5003 4125 1183 145 5 20 chr10 13863973 13864173 -126452592 - LTR57 LTR ERVL -214 197 1 2192 121 10 0 chr10 13864712 13865009 -126451756 + AluSx SINE Alu 1 300 -12 359 333 24 30 chr10 13865862 13866030 -126450735 + MIR3 SINE MIR 33 199 -9 2146 99 13 3 chr10 13866133 13866436 -126450329 + L1PA10 LINE L1 5861 6166 -2 1637 197 0 7 chr10 13866932 13867222 -126449543 + AluJo SINE Alu 1 288 -24 1627 161 67 11 chr10 13867921 13868206 -126448559 + AluJb SINE Alu 8 308 -4 1700 179 0 39 chr10 13868430 13868602 -126448163 - AluJb SINE Alu -16 296 140 1925 141 14 10 chr10 13868602 13868899 -126447866 - AluSq SINE Alu -15 298 1 1700 179 0 39 chr10 13868899 13869033 -126447732 - AluJb SINE Alu -172 140 2 891 294 12 8 chr10 13869829 13870081 -126446684 - MER70A LTR ERVL -106 366 114 243 288 98 37 chr10 13870164 13870327 -126446438 - MLT1J LTR MaLR -229 282 110 1854 161 7 3 chr10 13870517 13870802 -126445963 - AluJb SINE Alu -25 287 2 4030 151 37 23 chr10 13871376 13871451 -126445314 - L1MB7 LINE L1 0 6184 6112 2095 154 0 0 chr10 13871451 13871757 -126445008 + AluSx SINE Alu 1 306 -6 4030 151 37 23 chr10 13871757 13872417 -126444348 - L1MB7 LINE L1 -72 6112 5439 2170 115 0 0 chr10 13872609 13872896 -126443869 + AluSx SINE Alu 6 292 -20 912 197 91 72 chr10 13873047 13873367 -126443398 - L1MB5 LINE L1 0 6174 5849 2306 107 0 0 chr10 13874066 13874364 -126442401 - AluSx SINE Alu -14 298 1 1402 128 55 5 chr10 13874618 13874837 -126441928 + MER30 DNA MER1_type 1 230 0 598 248 159 50 chr10 13875024 13875143 -126441622 - L1ME4a LINE L1 -3 6118 6013 1874 163 7 14 chr10 13875143 13875437 -126441328 + AluJb SINE Alu 1 292 -20 598 248 159 50 chr10 13875437 13875821 -126440944 - L1ME4a LINE L1 -108 6013 5560 766 40 30 0 chr10 13876195 13876294 -126440471 + L1PB1 LINE L1 6012 6113 -38 261 0 0 0 chr10 13876305 13876334 -126440431 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 29 47 0 0 chr10 13876620 13876663 -126440102 + AT_rich Low_complexity Low_complexity 1 43 0 1369 205 0 4 chr10 13877616 13877865 -126438900 - AluJb SINE Alu -1 311 64 22 0 0 0 chr10 13878038 13878060 -126438705 + AT_rich Low_complexity Low_complexity 1 22 0 335 186 0 0 chr10 13878735 13878794 -126437971 + MIR3 SINE MIR 114 172 -36 1790 178 3 0 chr10 13878828 13879121 -126437644 + AluJb SINE Alu 6 299 -13 1151 133 6 0 chr10 13879142 13879308 -126437457 + AluSg/x SINE Alu 137 303 -9 24 0 0 0 chr10 13880024 13880048 -126436717 + AT_rich Low_complexity Low_complexity 1 24 0 2233 108 0 0 chr10 13880048 13880336 -126436429 - AluSx SINE Alu -24 288 1 278 223 127 85 chr10 13880366 13880436 -126436329 - MIR SINE MIR -55 207 141 1556 205 19 3 chr10 13880436 13880743 -126436022 - AluJo SINE Alu 0 312 1 278 223 127 85 chr10 13880743 13880836 -126435929 - MIR SINE MIR -121 141 35 2116 104 11 0 chr10 13881441 13881720 -126435045 - AluSc SINE Alu -13 296 15 2181 117 0 0 chr10 13882415 13882715 -126434050 - AluSx SINE Alu -9 303 4 969 203 107 26 chr10 13883023 13883333 -126433432 - MER20B DNA MER1_type 0 783 449 592 156 0 0 chr10 13883393 13883483 -126433282 - FLAM_A SINE Alu -28 114 25 911 135 172 0 chr10 13883514 13883677 -126433088 - AluJo SINE Alu -17 295 105 697 294 85 14 chr10 13883680 13883962 -126432803 - MER20B DNA MER1_type -447 336 35 2015 136 10 7 chr10 13884385 13884693 -126432072 + AluSx SINE Alu 1 309 -3 2008 156 7 0 chr10 13885599 13885907 -126430858 + AluJo SINE Alu 1 310 -2 726 214 129 102 chr10 13886285 13886367 -126430398 - MLT1D LTR MaLR -4 501 423 2195 123 0 0 chr10 13886367 13886667 -126430098 - AluSx SINE Alu -12 300 1 726 214 129 102 chr10 13886667 13887056 -126429709 - MLT1D LTR MaLR -82 423 17 392 246 82 0 chr10 13888032 13888142 -126428623 + L2 LINE L2 3154 3272 0 1263 130 10 43 chr10 13888272 13888480 -126428285 + MER2 DNA MER2_type 6 206 -139 525 71 0 0 chr10 13888506 13888576 -126428189 + (TA)n Simple_repeat Simple_repeat 2 71 0 4185 127 45 4 chr10 13888578 13889261 -126427504 - L1PB4 LINE L1 -7 6149 5439 1945 141 26 26 chr10 13890321 13890627 -126426138 - AluJo SINE Alu -6 306 1 949 239 47 0 chr10 13890643 13890856 -126425909 - MER58A DNA MER1_type 0 224 2 2756 84 11 0 chr10 13891023 13891380 -126425385 + THE1B LTR MaLR 1 361 -3 1921 144 7 16 chr10 13891624 13891930 -126424835 + AluJb SINE Alu 1 303 -9 906 126 0 15 chr10 13891970 13892105 -126424660 + FLAM_C SINE Alu 1 133 0 361 274 19 19 chr10 13893233 13893339 -126423426 + MIR3 SINE MIR 89 194 -14 1660 162 0 11 chr10 13893568 13893840 -126422925 - AluJb SINE Alu -6 306 38 2275 118 0 0 chr10 13894747 13895051 -126421714 - AluSx SINE Alu -8 304 1 1186 117 0 0 chr10 13895760 13895923 -126420842 + AluSx SINE Alu 1 163 -149 952 106 28 0 chr10 13896011 13896152 -126420613 - AluSg/x SINE Alu -17 293 149 2953 198 108 25 chr10 13896162 13896803 -126419962 - L1ME2 LINE L1 -1 6163 5448 3076 115 27 0 chr10 13896803 13897245 -126419520 - LTR22A LTR ERVK -4 454 1 2953 198 108 25 chr10 13897245 13897361 -126419404 - L1ME2 LINE L1 -716 5448 5343 8154 131 80 14 chr10 13897394 13898250 -126418515 + Tigger1 DNA MER2_type 24 1003 -1415 1773 121 0 11 chr10 13898250 13898522 -126418243 - AluSx SINE Alu -14 298 30 8154 131 80 14 chr10 13898522 13899021 -126417744 + Tigger1 DNA MER2_type 1003 1468 -950 1978 134 3 3 chr10 13899022 13899328 -126417437 - AluSx SINE Alu -6 306 1 2712 7 0 0 chr10 13899538 13899839 -126416926 - AluYb8 SINE Alu -17 301 1 24 53 0 0 chr10 13900563 13900601 -126416164 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr10 13900624 13900662 -126416103 + AT_rich Low_complexity Low_complexity 1 38 0 1010 0 0 0 chr10 13900789 13900896 -126415869 + U6 snRNA snRNA 1 107 0 8104 13 0 0 chr10 13900896 13902221 -126414544 + L1HS LINE L1 4831 6155 0 309 89 0 0 chr10 13902221 13902266 -126414499 + (A)n Simple_repeat Simple_repeat 1 45 0 1764 161 3 3 chr10 13902514 13902805 -126413960 - AluJo SINE Alu -21 291 1 981 182 0 0 chr10 13904112 13904288 -126412477 - FRAM SINE Alu 0 176 1 1786 169 10 0 chr10 13904710 13905011 -126411754 + AluJb SINE Alu 1 304 -8 226 208 0 0 chr10 13905012 13905065 -126411700 - L1MC4 LINE L1 -1342 6700 6648 1345 174 95 11 chr10 13906199 13906463 -126410302 - AluJb SINE Alu 0 312 27 1443 136 0 5 chr10 13906463 13906676 -126410089 + AluSx SINE Alu 1 212 -100 1932 206 49 37 chr10 13906808 13907109 -126409656 + L1MB4 LINE L1 5640 5951 -229 1893 126 27 0 chr10 13907109 13907402 -126409363 - AluSx SINE Alu -11 301 1 1932 206 49 37 chr10 13907402 13907590 -126409175 + L1MB4 LINE L1 5951 6135 -45 1737 162 3 10 chr10 13907593 13907889 -126408876 + AluJo SINE Alu 2 295 -17 337 149 0 27 chr10 13907918 13907992 -126408773 + (GAAA)n Simple_repeat Simple_repeat 4 75 0 1171 164 176 0 chr10 13908606 13908850 -126407915 - AluJo SINE Alu -8 304 18 2175 90 3 0 chr10 13908943 13909244 -126407521 + AluSx SINE Alu 1 302 -10 192 291 58 48 chr10 13909626 13909729 -126407036 + MIR SINE MIR 20 123 -139 1369 143 92 31 chr10 13909729 13910023 -126406742 - AluJo SINE Alu 0 312 1 820 168 0 0 chr10 13910043 13910174 -126406591 - FLAM_C SINE Alu -11 132 2 1963 147 10 0 chr10 13910986 13911293 -126405472 + AluSx SINE Alu 1 310 -2 333 0 0 0 chr10 13911294 13911331 -126405434 + (CA)n Simple_repeat Simple_repeat 2 38 0 1735 145 0 7 chr10 13911606 13911875 -126404890 - AluSx SINE Alu -8 304 38 2126 116 0 0 chr10 13912462 13912786 -126403979 - AluSq SINE Alu 0 313 1 1421 133 46 0 chr10 13912859 13913077 -126403688 + AluSg/x SINE Alu 74 301 -9 330 263 132 9 chr10 13913420 13913534 -126403231 - MIR3 SINE MIR -12 196 69 223 322 67 0 chr10 13913619 13913709 -126403056 - L2 LINE L2 -3 3269 3174 917 198 0 0 chr10 13913711 13913878 -126402887 + FRAM SINE Alu 1 166 -10 1934 100 35 7 chr10 13914325 13914615 -126402150 + AluSx SINE Alu 1 298 -14 299 276 75 37 chr10 13914890 13915024 -126401741 - MIR3 SINE MIR -65 143 5 2059 125 7 0 chr10 13915644 13915948 -126400817 + AluSx SINE Alu 1 306 -6 267 278 139 28 chr10 13916541 13916649 -126400116 - MIR SINE MIR -69 139 20 210 182 55 0 chr10 13917535 13917590 -126399175 + T-rich Low_complexity Low_complexity 2 59 0 1990 92 0 21 chr10 13918481 13918798 -126397967 + AluSx SINE Alu 8 318 0 2212 58 41 10 chr10 13918818 13919112 -126397653 + AluY SINE Alu 1 303 -8 734 142 0 37 chr10 13919467 13919601 -126397164 + FLAM_C SINE Alu 2 130 -3 2113 121 0 0 chr10 13919606 13919903 -126396862 + AluSx SINE Alu 1 297 -15 2226 118 0 0 chr10 13919903 13920216 -126396549 + AluSq SINE Alu 1 313 0 225 203 0 68 chr10 13920624 13920683 -126396082 - L2 LINE L2 -13 3259 3205 2044 122 3 3 chr10 13920718 13921021 -126395744 + AluSx SINE Alu 1 303 -9 699 153 25 0 chr10 13921021 13921139 -126395626 - AluSq/x SINE Alu -190 122 2 2128 80 28 0 chr10 13922904 13923192 -126393573 - AluSx SINE Alu -12 300 5 796 143 0 0 chr10 13924139 13924258 -126392507 - L1PB4 LINE L1 0 6156 6038 2119 107 3 3 chr10 13924965 13925265 -126391500 - AluSx SINE Alu -12 300 1 221 297 33 44 chr10 13925661 13925752 -126391013 + MIR SINE MIR 61 150 -112 1817 163 3 0 chr10 13925762 13926057 -126390708 + AluSx SINE Alu 1 296 -16 275 250 0 40 chr10 13926086 13926186 -126390579 + (TATG)n Simple_repeat Simple_repeat 4 99 0 2046 109 0 16 chr10 13926194 13926498 -126390267 - AluSx SINE Alu -13 299 1 2306 37 40 10 chr10 13926503 13926799 -126389966 - AluY SINE Alu -6 305 1 1897 125 0 56 chr10 13926802 13927122 -126389643 - AluSx SINE Alu -10 302 1 761 213 136 14 chr10 13927662 13927949 -126388816 - MER33 DNA MER1_type 0 324 3 1955 174 21 9 chr10 13928855 13929189 -126387576 - MER2 DNA MER2_type -7 338 1 1946 149 13 0 chr10 13931620 13931928 -126384837 - AluSx SINE Alu 0 312 1 2164 109 0 3 chr10 13932797 13933099 -126383666 - AluSx SINE Alu -11 301 1 2185 108 0 0 chr10 13933116 13933413 -126383352 - AluSg SINE Alu -13 297 1 1391 183 3 50 chr10 13934064 13934237 -126382528 - AluJo SINE Alu -10 302 149 2287 83 3 3 chr10 13934237 13934538 -126382227 - AluSq SINE Alu -12 301 1 1391 183 3 50 chr10 13934538 13934681 -126382084 - AluJo SINE Alu -163 149 1 1988 139 3 0 chr10 13935057 13935359 -126381406 + AluSx SINE Alu 1 303 -9 2221 94 3 0 chr10 13935364 13935661 -126381104 + AluSp SINE Alu 1 298 -15 610 243 31 35 chr10 13935661 13935919 -126380846 - L1MB8 LINE L1 -8 6170 5814 2394 70 0 0 chr10 13935936 13936235 -126380530 - AluY SINE Alu -12 299 1 3979 177 52 3 chr10 13936280 13937055 -126379710 - L1MB7 LINE L1 -31 6153 5341 2086 100 14 3 chr10 13937114 13937403 -126379362 + AluSx SINE Alu 1 292 -20 4511 51 2 11 chr10 13937403 13937967 -126378798 + L1PA6 LINE L1 5596 6154 0 740 180 0 8 chr10 13938684 13938806 -126377959 - FLAM_C SINE Alu -12 121 1 255 176 0 39 chr10 13940477 13940528 -126376237 - MER58 DNA MER1_type -25 2395 2347 235 263 0 0 chr10 13941118 13941175 -126375590 - L1MB8 LINE L1 -566 5604 5548 382 236 67 98 chr10 13941390 13941682 -126375083 - L1ME4a LINE L1 -2 6119 5842 2015 120 0 10 chr10 13941682 13941982 -126374783 - AluSx SINE Alu -3 309 13 382 236 67 98 chr10 13941982 13942108 -126374657 - L1ME4a LINE L1 -279 5842 5714 1499 160 71 18 chr10 13942117 13942399 -126374366 + AluJb SINE Alu 1 297 -15 852 202 19 47 chr10 13942401 13942460 -126374305 + L1MC2 LINE L1 4794 4853 -1293 2174 105 0 0 chr10 13942460 13942756 -126374009 - AluSg SINE Alu -14 296 1 852 202 19 47 chr10 13942756 13942909 -126373856 + L1MC2 LINE L1 4853 5000 -1146 254 125 104 0 chr10 13942911 13942959 -126373806 - THE1C LTR MaLR -4 360 308 180 0 0 0 chr10 13942967 13942987 -126373778 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2113 72 61 3 chr10 13943024 13943317 -126373448 - AluSg SINE Alu 0 310 1 1837 142 49 28 chr10 13943317 13943641 -126373124 - THE1C LTR MaLR -42 333 3 1316 213 44 6 chr10 13943643 13944115 -126372650 + L1MC2 LINE L1 4995 5483 -755 1420 99 5 19 chr10 13944116 13944329 -126372436 + AluJb SINE Alu 81 290 -22 2972 153 29 31 chr10 13944333 13944889 -126371876 + L1MC2 LINE L1 5477 6031 -313 325 186 0 0 chr10 13944891 13944961 -126371804 + L1MC2 LINE L1 6275 6344 0 296 151 0 0 chr10 13945010 13945063 -126371702 + L1M4 LINE L1 5758 5810 -364 813 173 67 0 chr10 13945064 13945214 -126371551 + FRAM SINE Alu 11 170 -6 2168 109 0 0 chr10 13945297 13945591 -126371174 + AluSg SINE Alu 1 294 -16 2100 145 0 13 chr10 13946504 13946815 -126369950 + AluSx SINE Alu 1 307 -5 316 245 19 28 chr10 13946879 13946985 -126369780 - LTR16B LTR ERVL -43 421 317 247 273 62 80 chr10 13947362 13947419 -126369346 + MER5B DNA MER1_type 4 60 -118 2184 78 57 3 chr10 13947419 13947702 -126369063 + AluSg SINE Alu 1 298 -12 247 273 62 80 chr10 13947702 13947820 -126368945 + MER5B DNA MER1_type 60 176 -2 313 226 104 35 chr10 13947950 13948065 -126368700 + L2 LINE L2 3191 3313 0 1885 103 60 18 chr10 13948110 13948392 -126368373 - AluSq SINE Alu -19 294 1 542 270 91 25 chr10 13948489 13948730 -126368035 + AluY SINE Alu 3 259 -52 496 132 0 0 chr10 13948872 13948948 -126367817 - AluS SINE Alu -235 77 2 2534 51 7 0 chr10 13949026 13949319 -126367446 + AluY SINE Alu 1 295 -16 1777 171 32 0 chr10 13949727 13950008 -126366757 + AluJo SINE Alu 1 290 -22 21 57 0 0 chr10 13951151 13951186 -126365579 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr10 13951404 13951429 -126365336 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr10 13952092 13952112 -126364653 + (T)n Simple_repeat Simple_repeat 1 20 0 1841 146 14 14 chr10 13952328 13952616 -126364149 + AluSx SINE Alu 1 288 -24 283 313 74 37 chr10 13952659 13952822 -126363943 + MER5A DNA MER1_type 17 185 -4 830 10 10 0 chr10 13952822 13952922 -126363843 + L1PA4 LINE L1 6055 6155 0 2066 112 49 0 chr10 13952986 13953272 -126363493 - AluSx SINE Alu -12 300 1 951 136 23 0 chr10 13953494 13953626 -126363139 + AluJo SINE Alu 1 135 -177 2094 79 13 69 chr10 13954832 13955167 -126361598 + AluSp SINE Alu 7 313 0 2428 97 0 0 chr10 13955264 13955572 -126361193 + AluSg SINE Alu 1 308 -2 2350 49 45 3 chr10 13955575 13955862 -126360903 + AluY SINE Alu 1 299 -12 1805 168 3 3 chr10 13955922 13956232 -126360533 - AluSx SINE Alu -2 310 1 872 165 31 36 chr10 13956257 13956451 -126360314 - MLT1D LTR MaLR -329 176 1 2336 105 0 0 chr10 13956682 13956986 -126359779 - AluSq SINE Alu -9 304 1 2540 77 3 0 chr10 13956995 13957307 -126359458 - AluSp SINE Alu 0 313 1 2501 84 3 0 chr10 13957316 13957627 -126359138 - AluSp SINE Alu -1 312 1 2423 98 0 0 chr10 13957641 13957948 -126358817 - AluSg SINE Alu -2 308 2 2577 111 27 11 chr10 13958091 13958566 -126358199 - MER1A DNA MER1_type -1 528 1 235 296 25 12 chr10 13958802 13958883 -126357882 + MLT1I LTR MaLR 326 407 -2 294 266 161 78 chr10 13958937 13959029 -126357736 + L1ME4a LINE L1 5389 5472 -649 2403 81 3 13 chr10 13959029 13959336 -126357429 + AluSp SINE Alu 1 304 -9 294 266 161 78 chr10 13959336 13959649 -126357116 + L1ME4a LINE L1 5472 5849 -272 2192 122 3 0 chr10 13959649 13959952 -126356813 + AluSx SINE Alu 1 304 -8 294 266 161 78 chr10 13959952 13960061 -126356704 + L1ME4a LINE L1 5849 5947 -174 1661 173 14 14 chr10 13960068 13960357 -126356408 - AluJb SINE Alu -22 290 2 1193 153 6 0 chr10 13960361 13960544 -126356221 - AluSg/x SINE Alu 0 312 129 2523 50 3 7 chr10 13960547 13960848 -126355917 - AluY SINE Alu -1 310 11 384 268 76 89 chr10 13961443 13961638 -126355127 + L1ME4a LINE L1 5900 6093 -28 2508 90 3 0 chr10 13961638 13961950 -126354815 - AluSp SINE Alu 0 313 1 384 268 76 89 chr10 13961950 13961978 -126354787 + L1ME4a LINE L1 6093 6120 -1 * 476 283 68 72 chr10 13961957 13962208 -126354557 + L1ME4a LINE L1 5868 6117 -4 23 78 0 0 chr10 13962217 13962268 -126354497 + AT_rich Low_complexity Low_complexity 1 51 0 1500 160 93 19 chr10 13962268 13962536 -126354229 - AluJo SINE Alu -24 288 1 2247 73 4 0 chr10 13962715 13962988 -126353777 + AluSp SINE Alu 27 300 -13 387 182 0 0 chr10 13963172 13963249 -126353516 + (TG)n Simple_repeat Simple_repeat 1 77 0 1176 155 0 73 chr10 13963710 13963778 -126352987 - AluJo SINE Alu -110 202 131 2189 102 28 0 chr10 13963778 13964061 -126352704 - AluSx SINE Alu -21 291 1 1176 155 0 73 chr10 13964061 13964198 -126352567 - AluJo SINE Alu -181 131 12 186 43 0 0 chr10 13964347 13964370 -126352395 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1942 120 7 7 chr10 13964373 13964648 -126352117 - AluSg SINE Alu -35 275 1 1612 160 32 14 chr10 13964673 13964955 -126351810 - AluJo SINE Alu -25 287 1 1020 178 26 5 chr10 13964966 13965157 -126351608 - AluJb SINE Alu 0 312 118 2097 125 0 46 chr10 13965176 13965503 -126351262 - AluSq SINE Alu -1 312 1 28 29 0 0 chr10 13965838 13965873 -126350892 + AT_rich Low_complexity Low_complexity 1 35 0 2286 89 16 3 chr10 13966099 13966403 -126350362 + AluSx SINE Alu 1 308 -4 2140 68 54 4 chr10 13966608 13966888 -126349877 - AluY SINE Alu -17 294 1 25 0 0 0 chr10 13967742 13967767 -126348998 + AT_rich Low_complexity Low_complexity 1 25 0 739 144 8 0 chr10 13967791 13967916 -126348849 - AluJb SINE Alu 0 312 187 907 206 123 0 chr10 13967916 13968169 -126348596 - LTR2 LTR ERV1 -3 446 163 1686 106 32 39 chr10 13968170 13968493 -126348272 - AluY SINE Alu 0 321 1 2169 83 4 0 chr10 13968500 13968804 -126347961 - AluSg SINE Alu 0 306 2 204 302 94 9 chr10 13968868 13968974 -126347791 + MIR3 SINE MIR 11 125 -83 672 106 53 25 chr10 13969019 13969242 -126347523 + AluJo SINE Alu 4 300 -12 960 155 75 17 chr10 13970344 13970518 -126346247 - AluJ SINE Alu -1 311 128 453 81 0 0 chr10 13970518 13970580 -126346185 + (TTA)n Simple_repeat Simple_repeat 2 63 0 1637 98 91 58 chr10 13970580 13970720 -126346045 - AluSx SINE Alu -27 285 151 594 41 0 0 chr10 13970720 13970793 -126345972 + (TAG)n Simple_repeat Simple_repeat 1 73 0 2263 113 0 0 chr10 13970793 13971084 -126345681 - AluSx SINE Alu -21 291 1 1637 98 91 58 chr10 13971084 13971218 -126345547 - AluSx SINE Alu -160 152 1 532 161 0 0 chr10 13971556 13971643 -126345122 - AluJ SINE Alu -178 134 48 1505 97 5 0 chr10 13971643 13971839 -126344926 + AluSp SINE Alu 104 300 -13 1944 130 0 27 chr10 13972090 13972405 -126344360 + AluSx SINE Alu 1 307 0 255 268 96 64 chr10 13972642 13972799 -126343966 - L1ME4a LINE L1 -1 6120 5959 22 0 0 0 chr10 13972821 13972843 -126343922 + AT_rich Low_complexity Low_complexity 1 22 0 1977 82 26 0 chr10 13972860 13973168 -126343597 - AluY SINE Alu 0 320 6 417 272 174 42 chr10 13973192 13973267 -126343498 - L1ME4a LINE L1 -299 5822 5758 2079 114 52 3 chr10 13973267 13973556 -126343209 - AluSx SINE Alu -9 303 1 417 272 174 42 chr10 13973556 13973672 -126343093 - L1ME4a LINE L1 -363 5758 5598 2159 141 0 0 chr10 13973672 13973984 -126342781 - AluSx SINE Alu 0 312 1 417 272 174 42 chr10 13973984 13974004 -126342761 - L1ME4a LINE L1 -523 5598 5582 474 95 0 0 chr10 13974022 13974085 -126342680 - AluJ/FRAM SINE Alu -17 295 233 832 180 0 0 chr10 13974085 13974213 -126342552 - AluJb SINE Alu -184 128 1 1069 226 16 8 chr10 13974488 13974524 -126342241 + MIR SINE MIR 13 47 -215 1611 145 71 25 chr10 13974524 13974806 -126341959 - AluJo SINE Alu -15 297 3 1069 226 16 8 chr10 13974806 13975017 -126341748 + MIR SINE MIR 47 262 0 536 93 0 0 chr10 13975512 13975587 -126341178 + AluJ/FLAM SINE Alu 2 76 -236 2269 113 0 0 chr10 13975643 13975945 -126340820 - AluSg SINE Alu -8 302 1 27 29 0 0 chr10 13976008 13976042 -126340723 + AT_rich Low_complexity Low_complexity 1 34 0 496 176 12 12 chr10 13976134 13976219 -126340546 + FLAM_C SINE Alu 34 118 -25 2261 110 0 10 chr10 13976350 13976650 -126340115 + AluSx SINE Alu 12 308 -4 1649 194 41 26 chr10 13978054 13978399 -126338366 + MLT1A1 LTR MaLR 4 353 -12 3314 134 39 14 chr10 13978975 13979324 -126337441 + MER1A DNA MER1_type 1 369 -2331 2353 107 3 0 chr10 13979324 13979632 -126337133 - AluSp SINE Alu -4 309 1 3314 134 39 14 chr10 13979632 13979795 -126336970 + MER1A DNA MER1_type 369 526 -1 2317 82 7 7 chr10 13980056 13980349 -126336416 + AluY SINE Alu 3 295 -16 1777 171 32 0 chr10 13980757 13981038 -126335727 + AluJo SINE Alu 1 290 -22 21 57 0 0 chr10 13982181 13982216 -126334549 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr10 13982434 13982459 -126334306 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr10 13983122 13983142 -126333623 + (T)n Simple_repeat Simple_repeat 1 20 0 1870 139 14 14 chr10 13983358 13983646 -126333119 + AluSx SINE Alu 1 288 -24 292 304 71 42 chr10 13983689 13983852 -126332913 + MER5A DNA MER1_type 17 185 0 841 0 20 0 chr10 13983852 13983951 -126332814 + L1PA4 LINE L1 6055 6155 0 2111 110 48 0 chr10 13984014 13984305 -126332460 - AluSx SINE Alu -7 305 1 976 129 23 0 chr10 13984527 13984659 -126332106 + AluJo SINE Alu 1 135 -177 2088 78 13 72 chr10 13985865 13986201 -126330564 + AluSp SINE Alu 7 313 0 2428 97 0 0 chr10 13986298 13986606 -126330159 + AluSg SINE Alu 1 308 -2 2255 87 44 0 chr10 13986609 13986907 -126329858 + AluY SINE Alu 1 311 0 2295 128 0 0 chr10 13987234 13987546 -126329219 - AluSq SINE Alu -1 312 1 1509 184 25 11 chr10 13988418 13988696 -126328069 + AluJo SINE Alu 1 282 -30 192 77 0 0 chr10 13988704 13988730 -126328035 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 2476 89 0 22 chr10 13989068 13989384 -126327381 - AluSp SINE Alu -4 309 1 210 276 126 11 chr10 13989410 13989497 -126327268 + MER5A DNA MER1_type 55 151 -38 492 165 24 0 chr10 13989501 13989586 -126327179 + FLAM_A SINE Alu 1 87 -55 2153 104 0 70 chr10 13989882 13990209 -126326556 - AluSx SINE Alu -8 304 1 2210 119 3 25 chr10 13990226 13990545 -126326220 - AluSx SINE Alu 0 312 1 2628 52 0 0 chr10 13990700 13991007 -126325758 + AluY SINE Alu 1 307 -4 1607 137 36 104 chr10 13991247 13991435 -126325330 - AluJo SINE Alu 0 312 155 223 26 77 0 chr10 13991435 13991474 -126325291 + T-rich Low_complexity Low_complexity 2 43 0 1607 137 36 104 chr10 13991474 13991620 -126325145 - AluJo SINE Alu -157 155 1 1613 150 0 0 chr10 13992064 13992298 -126324467 - AluSx SINE Alu -78 234 1 245 27 54 0 chr10 13992822 13992859 -126323906 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1636 183 4 0 chr10 13992862 13993135 -126323630 - AluSc SINE Alu -35 274 1 1005 218 130 53 chr10 13993183 13993467 -126323298 - L1ME2 LINE L1 -9 6155 5834 2182 99 45 0 chr10 13993467 13993759 -126323006 - AluSc SINE Alu -4 305 1 1005 218 130 53 chr10 13993759 13993851 -126322914 - L1ME2 LINE L1 -330 5834 5750 1664 155 4 15 chr10 13994018 13994282 -126322483 + AluJo SINE Alu 37 297 -15 2404 91 7 0 chr10 13994289 13994596 -126322169 + AluSp SINE Alu 1 309 -4 2152 128 0 0 chr10 13994711 13995016 -126321749 + AluSx SINE Alu 3 307 0 1938 159 3 13 chr10 13995843 13996152 -126320613 - AluJb SINE Alu -6 306 1 203 197 16 16 chr10 13996554 13996615 -126320150 + (AATTG)n Simple_repeat Simple_repeat 5 65 0 2586 50 7 3 chr10 13996764 13997067 -126319698 + AluY SINE Alu 1 304 -7 856 167 0 0 chr10 13997079 13997211 -126319554 + FLAM_C SINE Alu 2 133 0 659 187 0 70 chr10 13997287 13997474 -126319291 + MER96B DNA MER1_type? 1 174 -243 2101 151 0 3 chr10 13997578 13997889 -126318876 - AluSx SINE Alu -2 310 1 1849 173 0 16 chr10 13997920 13998232 -126318533 - AluJo SINE Alu -3 309 3 1615 165 17 37 chr10 13999550 13999847 -126316918 + AluJb SINE Alu 1 291 -21 2349 88 3 0 chr10 13999930 14000226 -126316539 + AluY SINE Alu 1 297 -14 2261 113 3 0 chr10 14000899 14001192 -126315573 + AluSq SINE Alu 1 294 -19 1850 124 37 50 chr10 14001358 14001657 -126315108 + AluSx SINE Alu 1 295 -17 2245 111 3 43 chr10 14002493 14002818 -126313947 + AluSx SINE Alu 1 312 0 2295 114 0 0 chr10 14003520 14003827 -126312938 - AluSx SINE Alu -5 307 1 2364 58 3 49 chr10 14004190 14004233 -126312532 - AluY SINE Alu 0 311 268 207 0 0 0 chr10 14004233 14004256 -126312509 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2364 58 3 49 chr10 14004256 14004538 -126312227 - AluY SINE Alu -43 268 1 695 211 8 8 chr10 14004546 14004679 -126312086 - FLAM_C SINE Alu 0 133 1 306 272 68 0 chr10 14004683 14004786 -126311979 - L1MC/D LINE L1 -860 5473 5364 1041 63 0 0 chr10 14005243 14005370 -126311395 - AluSg/x SINE Alu -6 306 180 2683 39 0 0 chr10 14005650 14005956 -126310809 + AluY SINE Alu 1 306 -5 2304 92 0 0 chr10 14006173 14006485 -126310280 - AluSx SINE Alu 0 312 1 1831 119 35 35 chr10 14006696 14006981 -126309784 - AluJo SINE Alu -17 295 11 752 189 25 6 chr10 14007012 14007171 -126309594 - L1MC3 LINE L1 -923 6862 6701 897 202 24 24 chr10 14007614 14007827 -126308938 - MER58A DNA MER1_type -9 215 3 426 247 119 50 chr10 14008853 14009072 -126307693 - MER112 DNA MER1_type -25 235 2 1941 132 63 16 chr10 14009093 14009352 -126307413 - MLT1B LTR MaLR 0 390 145 2284 130 38 78 chr10 14009352 14009585 -126307180 + MSTA LTR MaLR 1 242 -186 2270 122 0 0 chr10 14009585 14009889 -126306876 - AluSx SINE Alu -8 304 1 2284 130 38 78 chr10 14009889 14010059 -126306706 + MSTA LTR MaLR 242 387 -41 2043 134 3 10 chr10 14010059 14010365 -126306400 - AluSx SINE Alu -8 304 1 2284 130 38 78 chr10 14010365 14010406 -126306359 + MSTA LTR MaLR 387 428 0 1941 132 63 16 chr10 14010406 14010509 -126306256 - MLT1B LTR MaLR -245 145 11 2306 110 0 10 chr10 14010527 14010837 -126305928 - AluSc SINE Alu -2 307 1 420 129 75 32 chr10 14010848 14010941 -126305824 - L1PA16 LINE L1 -4 6162 6066 2998 115 23 6 chr10 14010941 14011420 -126305345 + LTR15 LTR ERV1 1 487 -6 2221 149 0 13 chr10 14011426 14011802 -126304963 - L1PA16 LINE L1 -97 6069 5699 504 329 14 7 chr10 14012353 14012499 -126304266 + MIR SINE MIR 6 152 -110 1734 125 0 4 chr10 14012504 14012744 -126304021 + AluSx SINE Alu 1 239 -73 2281 123 0 3 chr10 14012931 14013240 -126303525 - AluSx SINE Alu -4 308 1 1877 162 27 24 chr10 14013461 14013484 -126303281 + L1MB3 LINE L1 5806 5827 -356 2232 96 3 7 chr10 14013484 14013776 -126302989 + AluSx SINE Alu 11 301 -11 1877 162 27 24 chr10 14013776 14014122 -126302643 + L1MB3 LINE L1 5827 6176 -7 2278 90 0 3 chr10 14014278 14014567 -126302198 - AluY SINE Alu -23 288 1 1722 148 39 11 chr10 14015077 14015360 -126301405 + AluJo SINE Alu 1 291 -21 1913 149 3 3 chr10 14015654 14015968 -126300797 + AluJb SINE Alu 1 314 0 423 286 34 8 chr10 14016527 14016646 -126300119 - L2 LINE L2 -9 3304 3183 2297 114 0 0 chr10 14017075 14017373 -126299392 + AluSx SINE Alu 1 298 -14 341 194 61 10 chr10 14017393 14017491 -126299274 - MLT1L LTR MaLR -8 607 505 432 253 105 102 chr10 14017518 14017870 -126298895 - MLT1L LTR MaLR -221 394 42 2108 104 11 11 chr10 14017950 14018229 -126298536 + AluSg SINE Alu 1 279 -31 1109 66 0 0 chr10 14019316 14019482 -126297283 - AluSc SINE Alu 0 310 145 373 253 65 146 chr10 14019602 14020048 -126296717 - L2 LINE L2 -801 2513 2104 1607 200 14 11 chr10 14020446 14020749 -126296016 + AluJo SINE Alu 2 305 0 1182 221 83 88 chr10 14020801 14020985 -126295780 + MLT1C LTR MaLR 5 188 -279 2314 114 13 0 chr10 14020985 14021292 -126295473 + AluSx SINE Alu 1 311 -1 1182 221 83 88 chr10 14021292 14021564 -126295201 + MLT1C LTR MaLR 188 459 -8 184 319 111 14 chr10 14021593 14021665 -126295100 + MER5A DNA MER1_type 111 189 0 193 364 0 0 chr10 14021961 14022027 -126294738 + L2 LINE L2 750 815 -2499 758 149 0 0 chr10 14022038 14022152 -126294613 - FLAM_A SINE Alu -5 137 24 345 348 106 0 chr10 14022753 14022914 -126293851 - MIR SINE MIR 0 262 85 523 255 48 39 chr10 14022914 14023122 -126293643 - LTR16C LTR ERVL 0 491 282 301 219 7 22 chr10 14023135 14023225 -126293540 + MLT1D LTR MaLR 4 92 -413 862 209 25 0 chr10 14023254 14023417 -126293348 + FRAM SINE Alu 1 166 -10 1162 270 61 3 chr10 14023431 14023750 -126293015 + MLT1D LTR MaLR 113 457 -48 3910 82 3 91 chr10 14023750 14023825 -126292940 - MER41A LTR ERV1 0 554 474 2320 113 0 0 chr10 14023825 14024127 -126292638 + AluSx SINE Alu 1 302 -10 3910 82 3 91 chr10 14024127 14024658 -126292107 - MER41A LTR ERV1 -80 474 1 1162 270 61 3 chr10 14024658 14024701 -126292064 + MLT1D LTR MaLR 457 496 -9 182 349 79 0 chr10 14024996 14025059 -126291706 - MIR SINE MIR -179 83 16 2164 116 0 7 chr10 14025100 14025392 -126291373 + AluSx SINE Alu 1 290 -22 951 171 7 0 chr10 14025392 14025544 -126291221 + AluSq SINE Alu 134 286 -27 2285 91 3 23 chr10 14025592 14025900 -126290865 - AluSg1 SINE Alu -7 302 1 606 101 0 0 chr10 14025900 14025979 -126290786 - AluSq/x SINE Alu -167 145 67 1323 131 0 30 chr10 14025979 14026178 -126290587 - AluSg SINE Alu -113 197 5 712 177 23 0 chr10 14026194 14026324 -126290441 - FLAM_C SINE Alu 0 133 1 340 219 12 0 chr10 14026324 14026406 -126290359 + Charlie5 DNA MER1_type 2503 2585 -27 497 224 8 0 chr10 14027171 14027296 -126289469 + CT-rich Low_complexity Low_complexity 1 126 0 2333 86 7 0 chr10 14027296 14027586 -126289179 - AluSx SINE Alu -20 292 1 725 232 6 18 chr10 14027589 14027753 -126289012 - FRAM SINE Alu -15 161 1 881 197 27 22 chr10 14028006 14028189 -126288576 + MLT1D LTR MaLR 3 186 -319 475 188 0 176 chr10 14028194 14028276 -126288489 + MLT1D LTR MaLR 325 420 -206 2239 109 0 35 chr10 14028276 14028588 -126288177 - AluSx SINE Alu -11 301 1 2224 97 0 16 chr10 14028590 14028927 -126287838 - AluSq SINE Alu 0 313 1 475 188 0 176 chr10 14028927 14029053 -126287712 + MLT1D LTR MaLR 421 624 -2 201 333 143 0 chr10 14029157 14029241 -126287524 + L2 LINE L2 3146 3241 -31 * 249 292 36 36 chr10 14029227 14029364 -126287401 - L2 LINE L2 -1256 2058 1922 2544 74 0 0 chr10 14029365 14029676 -126287089 + AluY SINE Alu 1 311 0 2203 110 0 16 chr10 14030125 14030435 -126286330 - AluSc SINE Alu -2 307 3 856 176 57 13 chr10 14030535 14030694 -126286071 + FRAM SINE Alu 1 166 0 2413 95 0 13 chr10 14030824 14031129 -126285636 - AluSp SINE Alu -12 301 1 211 261 15 31 chr10 14031191 14031256 -126285509 - L2 LINE L2 -11 3261 3198 2581 54 0 0 chr10 14031329 14031625 -126285140 - AluY SINE Alu -13 298 3 1919 164 6 3 chr10 14031975 14032110 -126284655 + AluJb SINE Alu 1 134 -178 2285 112 7 3 chr10 14032110 14032415 -126284350 + AluSq SINE Alu 1 306 -7 1919 164 6 3 chr10 14032415 14032590 -126284175 + AluJb SINE Alu 134 312 0 2462 60 0 0 chr10 14032821 14033121 -126283644 + AluY SINE Alu 1 300 -11 2331 108 0 0 chr10 14033480 14033785 -126282980 + AluSx SINE Alu 1 305 -7 1770 162 3 27 chr10 14034002 14034175 -126282590 - AluJo SINE Alu -22 290 125 2548 48 3 0 chr10 14034175 14034469 -126282296 + AluY SINE Alu 1 295 -16 1770 162 3 27 chr10 14034469 14034592 -126282173 - AluJo SINE Alu -187 125 1 2142 125 0 0 chr10 14034653 14034948 -126281817 - AluSx SINE Alu -2 310 16 2147 124 3 0 chr10 14035565 14035864 -126280901 + AluSx SINE Alu 1 300 -12 197 264 56 14 chr10 14036088 14036160 -126280605 + L3 LINE CR1 1499 1573 -4 191 333 50 50 chr10 14036227 14036407 -126280358 + L2 LINE L2 2511 2690 -624 2288 123 0 0 chr10 14036468 14036770 -126279995 - AluSx SINE Alu -10 302 1 1715 118 0 4 chr10 14036770 14036999 -126279766 - AluSg/x SINE Alu -9 303 76 2443 98 0 0 chr10 14037246 14037553 -126279212 + AluSx SINE Alu 1 307 -5 1128 198 16 37 chr10 14037648 14037890 -126278875 - AluJo SINE Alu -21 291 55 23 0 0 0 chr10 14037894 14037917 -126278848 + AT_rich Low_complexity Low_complexity 1 23 0 1963 137 44 3 chr10 14038106 14038399 -126278366 - AluSx SINE Alu -7 305 1 701 268 105 88 chr10 14038403 14038526 -126278239 + L1ME3 LINE L1 5083 5202 -960 1651 210 3 10 chr10 14038526 14038831 -126277934 + AluJb SINE Alu 1 303 -9 701 268 105 88 chr10 14038831 14039002 -126277763 + L1ME3 LINE L1 5202 5368 -794 2102 131 3 0 chr10 14039002 14039300 -126277465 + AluSp SINE Alu 1 299 -14 701 268 105 88 chr10 14039300 14039644 -126277121 + L1ME3 LINE L1 5368 5704 -458 2420 90 3 0 chr10 14039644 14039954 -126276811 + AluSp SINE Alu 1 311 -2 701 268 105 88 chr10 14039954 14040086 -126276679 + L1ME3 LINE L1 5704 5869 -293 945 135 0 56 chr10 14040086 14040217 -126276548 + L1MB3 LINE L1 6014 6134 -49 2330 95 3 0 chr10 14040217 14040511 -126276254 - AluSp SINE Alu -18 295 1 945 135 0 56 chr10 14040511 14040557 -126276208 + L1MB3 LINE L1 6134 6181 -2 701 268 105 88 chr10 14040557 14040631 -126276134 + L1ME3 LINE L1 5869 5940 -222 2023 126 7 0 chr10 14040777 14041089 -126275676 - AluSx SINE Alu 0 315 2 736 153 46 30 chr10 14041121 14041252 -126275513 + FLAM_C SINE Alu 1 133 0 1613 209 7 3 chr10 14041266 14041572 -126275193 + AluJo SINE Alu 1 307 -5 29 28 0 0 chr10 14042311 14042347 -126274418 + AT_rich Low_complexity Low_complexity 1 36 0 2626 144 19 16 chr10 14042367 14042798 -126273967 - L1PA16 LINE L1 -8 6158 5727 250 128 21 0 chr10 14042799 14042846 -126273919 + Charlie5 DNA MER1_type 2533 2580 -32 2116 107 0 55 chr10 14043110 14043419 -126273346 - AluSg SINE Alu -18 292 1 180 238 143 60 chr10 14043593 14043677 -126273088 - MIR3 SINE MIR -4 204 114 297 282 215 34 chr10 14043694 14043843 -126272922 - MIR SINE MIR -10 252 77 1580 177 9 47 chr10 14044058 14044380 -126272385 + AluJo SINE Alu 2 311 -1 2211 128 0 0 chr10 14044386 14044683 -126272082 + AluSx SINE Alu 1 297 -15 831 207 149 0 chr10 14044725 14044967 -126271798 - MER33 DNA MER1_type -46 278 1 2490 68 0 3 chr10 14045159 14045452 -126271313 + AluSc SINE Alu 2 293 -16 342 73 18 0 chr10 14045894 14045949 -126270816 - AluSp/q SINE Alu -74 229 174 2259 82 3 10 chr10 14046604 14046895 -126269870 - AluSx SINE Alu -2 310 22 2074 153 0 0 chr10 14047273 14047573 -126269192 - AluSx SINE Alu -12 300 1 2329 91 0 3 chr10 14048510 14048817 -126267948 - AluSq SINE Alu -5 308 3 516 275 96 37 chr10 14050200 14050418 -126266347 - MIR SINE MIR -18 244 14 220 167 33 67 chr10 14051031 14051091 -126265674 - L2 LINE L2 0 3313 3256 410 285 228 5 chr10 14051747 14051940 -126264825 - MIR SINE MIR -13 249 14 306 243 68 57 chr10 14052391 14052562 -126264203 - MIR SINE MIR -62 146 23 314 271 181 20 chr10 14052917 14053116 -126263649 - MIR SINE MIR -30 232 2 247 264 192 40 chr10 14053426 14053551 -126263214 + MIR SINE MIR 6 135 -73 2517 45 0 13 chr10 14053674 14053988 -126262777 - AluY SINE Alu -1 310 1 223 331 47 74 chr10 14054141 14054289 -126262476 + L2 LINE L2 3103 3246 -26 349 324 60 0 chr10 14054804 14054986 -126261779 + MER91A DNA MER1_type 3 195 -1 1573 153 33 0 chr10 14055418 14055692 -126261073 - AluJo SINE Alu -13 299 17 205 321 60 30 chr10 14055722 14055890 -126260875 + L2 LINE L2 2776 2948 -366 979 156 39 6 chr10 14055933 14056113 -126260652 + AluJb SINE Alu 115 300 -12 208 235 0 20 chr10 14056389 14056440 -126260325 + L2 LINE L2 3258 3307 -6 1976 129 3 0 chr10 14056440 14056735 -126260030 - AluSx SINE Alu -16 296 1 306 264 124 16 chr10 14056964 14057093 -126259672 + L2 LINE L2 3171 3313 0 180 265 189 30 chr10 14059048 14059180 -126257585 - L2 LINE L2 -208 3064 2912 344 263 11 21 chr10 14059217 14059312 -126257453 - MER5B DNA MER1_type -81 97 4 673 293 207 10 chr10 14059438 14059834 -126256931 - L2 LINE L2 -595 2719 2246 747 230 11 113 chr10 14059947 14060230 -126256535 - MER112 DNA MER1_type -6 254 1 202 135 54 0 chr10 14060578 14060615 -126256150 - L2 LINE L2 -1525 1789 1751 885 159 0 0 chr10 14060895 14061033 -126255732 - FAM SINE Alu -13 172 35 264 248 117 69 chr10 14061336 14061481 -126255284 + MIR SINE MIR 107 258 -4 626 118 49 0 chr10 14061866 14061968 -126254797 + HY1 scRNA scRNA 2 108 -4 2106 111 0 7 chr10 14061985 14062283 -126254482 - AluSx SINE Alu -16 296 1 465 312 163 14 chr10 14062544 14063082 -126253683 - L1MC4a LINE L1 -321 5800 5259 941 226 57 115 chr10 14064104 14064263 -126252502 - MER34B LTR ERV1 -2 563 396 1913 137 3 20 chr10 14064263 14064569 -126252196 + AluSx SINE Alu 1 301 -11 941 226 57 115 chr10 14064569 14065002 -126251763 - MER34B LTR ERV1 -169 396 5 365 297 54 9 chr10 14065044 14065155 -126251610 + L2 LINE L2 3157 3272 0 945 219 143 94 chr10 14065250 14065627 -126251138 - MER110A LTR ERV1 0 491 105 2666 135 36 7 chr10 14065627 14066041 -126250724 + MSTA LTR MaLR 1 426 -2 945 219 143 94 chr10 14066041 14066152 -126250613 - MER110A LTR ERV1 -386 105 1 2307 89 0 6 chr10 14066320 14066633 -126250132 + AluSp SINE Alu 1 311 -2 2723 168 23 2 chr10 14066633 14067110 -126249655 + L1MB4 LINE L1 5656 6142 -38 1615 153 0 18 chr10 14067123 14067397 -126249368 + AluJb SINE Alu 22 290 -22 385 226 21 11 chr10 14067545 14067638 -126249127 - MER45 DNA AcHobo -1453 128 35 1939 126 0 3 chr10 14067776 14068091 -126248674 + AluSx SINE Alu 11 324 0 3953 70 9 23 chr10 14069316 14069433 -126247332 - MER41A LTR ERV1 0 554 437 1709 98 10 101 chr10 14069433 14069767 -126246998 + AluSx SINE Alu 4 309 0 3953 70 9 23 chr10 14069767 14070174 -126246591 - MER41A LTR ERV1 -117 437 35 415 278 167 17 chr10 14070212 14070392 -126246373 - MIR SINE MIR 0 262 56 206 296 42 0 chr10 14070519 14070590 -126246175 - MIR SINE MIR 0 262 189 219 69 0 0 chr10 14070591 14070620 -126246145 + (TA)n Simple_repeat Simple_repeat 2 30 0 1106 121 0 18 chr10 14070621 14070786 -126245979 - AluSg/x SINE Alu -17 295 134 2035 100 10 23 chr10 14070786 14071087 -126245678 - AluSp SINE Alu -15 298 2 244 203 51 0 chr10 14071091 14071150 -126245615 - MIR SINE MIR -102 160 99 967 230 96 9 chr10 14071166 14071396 -126245369 + MIR SINE MIR 13 262 0 227 287 130 35 chr10 14071768 14071883 -126244882 + MIR SINE MIR 15 140 -122 1775 138 10 27 chr10 14071955 14072251 -126244514 + AluJo SINE Alu 11 301 -11 2343 65 3 0 chr10 14073249 14073542 -126243223 + AluY SINE Alu 1 294 -17 449 176 0 0 chr10 14073608 14073682 -126243083 - AluJo SINE Alu -9 303 230 2197 149 7 71 chr10 14073682 14074239 -126242526 - LTR9 LTR ERV1 0 612 1 966 177 62 49 chr10 14074239 14074465 -126242300 - AluJo SINE Alu -79 233 5 459 239 38 31 chr10 14074542 14074701 -126242064 + LTR33A LTR ERVL 362 521 -2 1986 130 0 3 chr10 14074814 14075113 -126241652 - AluSx SINE Alu -13 299 2 2100 122 3 6 chr10 14075347 14075659 -126241106 + AluSx SINE Alu 1 311 -1 2196 107 0 0 chr10 14075946 14076245 -126240520 - AluSx SINE Alu -13 299 1 312 315 37 25 chr10 14076363 14076501 -126240264 - MIR SINE MIR -68 140 34 919 221 93 77 chr10 14076895 14076977 -126239788 + MLT1J2 LTR MaLR 1 80 -370 2329 82 0 13 chr10 14076977 14077292 -126239473 - AluY SINE Alu 0 311 1 919 221 93 77 chr10 14077292 14077443 -126239322 + MLT1J2 LTR MaLR 80 227 -223 1604 177 21 10 chr10 14077443 14077731 -126239034 - AluJo SINE Alu -21 291 1 919 221 93 77 chr10 14077731 14077868 -126238897 + MLT1J2 LTR MaLR 227 383 -67 2996 150 20 76 chr10 14077868 14078516 -126238249 + LTR9 LTR ERV1 1 612 0 919 221 93 77 chr10 14078516 14078583 -126238182 + MLT1J2 LTR MaLR 383 447 -3 195 382 99 0 chr10 14079167 14079298 -126237467 + L2 LINE L2 2896 3039 -233 476 186 0 0 chr10 14079298 14079396 -126237369 + L1ME1 LINE L1 6076 6177 -1 1542 172 0 11 chr10 14079465 14079750 -126237015 - AluJo SINE Alu -22 290 9 2168 162 22 39 chr10 14079751 14080029 -126236736 + L1MC3 LINE L1 6142 6136 -208 1909 162 0 0 chr10 14080029 14080338 -126236427 + AluSx SINE Alu 1 309 -3 2168 162 22 39 chr10 14080338 14080531 -126236234 + L1MC3 LINE L1 6135 6330 -14 2186 55 0 41 chr10 14080532 14080857 -126235908 + AluY SINE Alu 1 313 0 1811 158 14 3 chr10 14080865 14081162 -126235603 + AluSx SINE Alu 1 300 -12 239 286 29 0 chr10 14081292 14081362 -126235403 + L2 LINE L2 3221 3292 -21 467 259 28 0 chr10 14081382 14081490 -126235275 + L2 LINE L2 3186 3296 -17 356 226 95 0 chr10 14081558 14081642 -126235123 + MER45C DNA AcHobo 542 633 -320 415 276 196 14 chr10 14081674 14081888 -126234877 - L2 LINE L2 -861 2453 2201 3523 149 31 0 chr10 14081888 14082470 -126234295 + L1MB3 LINE L1 5542 6141 -42 1800 139 7 17 chr10 14082470 14082764 -126234001 + AluSx SINE Alu 1 291 -21 25 31 0 0 chr10 14082764 14082796 -126233969 + AT_rich Low_complexity Low_complexity 1 32 0 248 40 0 263 chr10 14082796 14082834 -126233931 + L1MB4 LINE L1 6125 6135 -45 2129 101 3 0 chr10 14082834 14083121 -126233644 - AluSp SINE Alu -17 296 9 248 40 0 263 chr10 14083121 14083158 -126233607 + L1MB4 LINE L1 6135 6180 0 734 304 40 13 chr10 14083168 14083392 -126233373 - MIR SINE MIR -13 249 20 1634 134 76 10 chr10 14083473 14083763 -126233002 + AluJo SINE Alu 1 309 -3 1919 156 3 0 chr10 14083771 14084073 -126232692 + AluSx SINE Alu 1 303 -9 1128 157 8 89 chr10 14084546 14084654 -126232111 - MLT1B LTR MaLR -174 216 136 1914 128 10 0 chr10 14084654 14084951 -126231814 - L1PA13 LINE L1 0 6163 5864 1128 157 8 89 chr10 14084951 14085077 -126231688 - MLT1B LTR MaLR -254 136 1 2084 98 10 3 chr10 14085301 14085597 -126231168 - AluSg SINE Alu -8 302 5 328 249 127 55 chr10 14085952 14086075 -126230690 - L1MC/D LINE L1 -2001 5807 5665 1808 147 10 0 chr10 14086075 14086367 -126230398 - AluJb SINE Alu -17 295 1 328 249 127 55 chr10 14086367 14086424 -126230341 - L1MC/D LINE L1 -2143 5665 5614 1450 154 19 67 chr10 14086974 14087087 -126229678 + AluJo SINE Alu 7 124 -188 1851 138 144 46 chr10 14087087 14087132 -126229633 - MSTA LTR MaLR 0 428 389 2380 71 7 0 chr10 14087132 14087441 -126229324 + AluY SINE Alu 1 311 0 1851 138 144 46 chr10 14087441 14087785 -126228980 - MSTA LTR MaLR -39 389 1 1450 154 19 67 chr10 14087785 14087983 -126228782 + AluJo SINE Alu 124 303 -9 925 256 53 71 chr10 14087983 14088417 -126228348 - MER101 LTR ERV1 -38 436 11 251 306 71 53 chr10 14088691 14088861 -126227904 + L3 LINE CR1 517 689 -888 1823 154 3 0 chr10 14088919 14089205 -126227560 + AluSx SINE Alu 1 287 -25 232 272 12 0 chr10 14089225 14089306 -126227459 - L1MC4 LINE L1 -1347 6695 6614 1221 220 32 63 chr10 14089356 14089734 -126227031 - LTR37A LTR ERV1 -42 384 19 550 326 164 25 chr10 14089779 14090217 -126226548 + L3 LINE CR1 791 1289 -288 396 59 0 0 chr10 14090246 14090297 -126226468 + (ATG)n Simple_repeat Simple_repeat 3 53 0 290 282 13 0 chr10 14090328 14090406 -126226359 - MIR SINE MIR -11 251 173 213 286 18 0 chr10 14090459 14090515 -126226250 + MIR3 SINE MIR 148 204 -4 1786 158 0 43 chr10 14091278 14091601 -126225164 - AluJo SINE Alu -2 310 2 2080 124 3 3 chr10 14091816 14092123 -126224642 - AluSx SINE Alu -5 307 1 2083 94 0 27 chr10 14092781 14093079 -126223686 - AluSq SINE Alu -20 293 4 260 83 188 0 chr10 14093122 14093170 -126223595 - AluJ/FLAM SINE Alu -229 73 17 1677 149 0 4 chr10 14093178 14093446 -126223319 + AluJb SINE Alu 46 312 0 2158 93 10 7 chr10 14093859 14094161 -126222604 + AluSp SINE Alu 1 303 -10 2391 52 13 3 chr10 14094790 14095098 -126221667 + AluSx SINE Alu 2 312 0 1945 124 0 0 chr10 14096370 14096681 -126220084 - AluSx SINE Alu 0 313 3 927 171 0 7 chr10 14096683 14096835 -126219930 - AluJo SINE Alu -14 288 138 2218 113 13 3 chr10 14096934 14097243 -126219522 + LTR9 LTR ERV1 1 312 -300 830 157 0 15 chr10 14097266 14097400 -126219365 - AluJo SINE Alu -170 132 1 999 154 0 18 chr10 14097530 14097699 -126219066 + FRAM SINE Alu 1 166 0 1365 181 11 4 chr10 14097700 14097960 -126218805 - AluJb SINE Alu -1 311 50 208 0 0 0 chr10 14098539 14098562 -126218203 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 2028 81 40 0 chr10 14098562 14098834 -126217931 - AluSp SINE Alu -28 285 3 2020 178 18 3 chr10 14098911 14099294 -126217471 - L1MB7 LINE L1 -14 6170 5782 4431 41 13 4 chr10 14099345 14099885 -126216880 - L1PA5 LINE L1 -4 6150 5606 2063 175 9 55 chr10 14099893 14100327 -126216438 - L1MB7 LINE L1 -409 5775 5362 2153 107 0 3 chr10 14100328 14100627 -126216138 - AluSx SINE Alu -14 298 1 1630 130 32 18 chr10 14100899 14101203 -126215562 + AluSx SINE Alu 1 308 0 2031 125 0 10 chr10 14101204 14101515 -126215250 + AluSx SINE Alu 1 308 -4 2216 116 0 0 chr10 14101519 14101830 -126214935 + AluSx SINE Alu 1 311 -1 1845 167 0 3 chr10 14102884 14103195 -126213570 + AluJo SINE Alu 1 310 -2 221 331 108 50 chr10 14103909 14104048 -126212717 + L2 LINE L2 3126 3272 0 323 133 217 0 chr10 14104920 14104980 -126211785 - L1MB4 LINE L1 -77 6103 6031 180 343 94 70 chr10 14105789 14106075 -126210690 + L2 LINE L2 2348 2640 -674 196 250 0 0 chr10 14106726 14106766 -126209999 + L2 LINE L2 3268 3307 -6 2050 219 80 14 chr10 14107214 14107712 -126209053 + MER54A LTR ERVL 371 901 0 1984 112 4 0 chr10 14109047 14109350 -126207415 - AluSx SINE Alu 0 309 6 195 139 0 0 chr10 14110709 14110745 -126206020 + (TA)n Simple_repeat Simple_repeat 2 37 0 1790 155 3 0 chr10 14110926 14111217 -126205548 - AluJb SINE Alu -16 296 5 2186 99 10 6 chr10 14111381 14111693 -126205072 - AluSp SINE Alu 0 313 1 1998 145 0 3 chr10 14114409 14114720 -126202045 + AluSx SINE Alu 1 310 -2 347 258 0 22 chr10 14115389 14115478 -126201287 + MIR SINE MIR 173 259 -3 219 69 0 0 chr10 14115806 14115835 -126200930 + (TAA)n Simple_repeat Simple_repeat 1 29 0 775 267 91 22 chr10 14116114 14116346 -126200419 + MIR SINE MIR 15 262 0 21 0 0 0 chr10 14116382 14116403 -126200362 + AT_rich Low_complexity Low_complexity 1 21 0 2209 93 0 3 chr10 14116597 14116899 -126199866 + AluSc SINE Alu 1 301 -8 28 29 0 0 chr10 14117108 14117143 -126199622 + AT_rich Low_complexity Low_complexity 1 35 0 1941 125 40 0 chr10 14117277 14117573 -126199192 - AluSx SINE Alu -4 308 1 2267 100 6 0 chr10 14117698 14118009 -126198756 + AluSp SINE Alu 1 313 0 703 306 32 19 chr10 14118051 14118267 -126198498 + MIR SINE MIR 40 258 -4 182 240 177 21 chr10 14118281 14118377 -126198388 - L2 LINE L2 -63 3250 3140 825 138 8 8 chr10 14119081 14119211 -126197554 + FLAM_C SINE Alu 2 131 -12 1422 196 26 26 chr10 14119231 14119542 -126197223 + AluJo SINE Alu 2 312 0 223 206 27 41 chr10 14121146 14121219 -126195546 + GA-rich Low_complexity Low_complexity 4 75 0 335 296 98 15 chr10 14121365 14121497 -126195268 - L1ME4a LINE L1 -233 5888 5746 292 327 109 19 chr10 14122921 14123077 -126193688 - MIR3 SINE MIR -9 199 30 25 65 0 0 chr10 14123899 14123945 -126192820 + AT_rich Low_complexity Low_complexity 1 46 0 276 30 0 0 chr10 14125629 14125662 -126191103 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 181 286 98 53 chr10 14125932 14126065 -126190700 + L2 LINE L2 3079 3217 -96 2113 85 37 0 chr10 14126712 14127007 -126189758 + AluSg SINE Alu 1 306 -4 2009 117 0 13 chr10 14128025 14128332 -126188433 + AluSg SINE Alu 1 303 -7 1150 265 34 66 chr10 14128459 14128928 -126187837 - THE1C LTR MaLR 0 375 1 1514 164 35 35 chr10 14128977 14129090 -126187675 + AluJo SINE Alu 1 113 -199 2310 96 0 0 chr10 14129090 14129392 -126187373 - AluSx SINE Alu -10 302 1 1514 164 35 35 chr10 14129392 14129589 -126187176 + AluJo SINE Alu 112 311 -1 2391 87 0 0 chr10 14129883 14130193 -126186572 - AluSg SINE Alu 0 310 1 288 189 268 8 chr10 14130232 14130359 -126186406 + L1ME4a LINE L1 5962 6121 0 2115 78 28 0 chr10 14131009 14131291 -126185474 - AluSp SINE Alu -23 290 1 349 59 78 0 chr10 14131352 14131403 -126185362 - MLT2A2 LTR ERVL 0 453 399 347 277 0 43 chr10 14131405 14131499 -126185266 + L1MC4 LINE L1 6614 6703 -1339 325 359 0 0 chr10 14131421 14131513 -126185252 - L1MC4 LINE L1 -1337 6705 6614 * 607 85 0 0 chr10 14131525 14131607 -126185158 - MLT2A1 LTR ERVL -40 404 323 1083 78 14 0 chr10 14131707 14131848 -126184917 - MLT2A2 LTR ERVL -310 143 1 342 317 127 28 chr10 14131850 14131992 -126184773 - MIR SINE MIR -90 172 17 990 271 36 12 chr10 14132125 14132376 -126184389 - MIR SINE MIR 0 262 6 2216 92 0 0 chr10 14132547 14132841 -126183924 + AluSc SINE Alu 1 294 -15 1916 108 0 0 chr10 14132937 14133197 -126183568 - AluSx SINE Alu -14 298 39 690 243 39 6 chr10 14133431 14133612 -126183153 + MER5A DNA MER1_type 1 187 -2 296 230 133 9 chr10 14134484 14134597 -126182168 + L1ME4a LINE L1 5944 6070 -51 4369 161 19 18 chr10 14134610 14135178 -126181587 - L1MB7 LINE L1 -15 6169 5598 1700 148 49 0 chr10 14135178 14135462 -126181303 - AluJo SINE Alu -14 298 1 4369 161 19 18 chr10 14135462 14135678 -126181087 - L1MB7 LINE L1 -586 5598 5384 3749 143 42 42 chr10 14135697 14136084 -126180681 - L1MA7 LINE L1 0 6291 5902 2283 95 3 0 chr10 14136084 14136390 -126180375 + AluSx SINE Alu 1 307 -5 3749 143 42 42 chr10 14136390 14136718 -126180047 - L1MA7 LINE L1 -388 5903 5576 1006 109 195 226 chr10 14136720 14137207 -126179558 - LTR12 LTR ERV1 -234 480 9 1180 121 6 0 chr10 14137207 14137381 -126179384 - L1MA7 LINE L1 -725 5587 5413 * 6050 155 18 6 chr10 14137378 14139385 -126177380 - L1PB3 LINE L1 -1 6153 4125 346 253 258 20 chr10 14139518 14139716 -126177049 + MIR SINE MIR 6 250 -12 1035 199 28 48 chr10 14140022 14140235 -126176530 - MLT1A2 LTR MaLR 0 374 165 1458 197 7 13 chr10 14140235 14140540 -126176225 - AluSx SINE Alu -9 303 1 1035 199 28 48 chr10 14140540 14140577 -126176188 - MLT1A2 LTR MaLR -209 165 129 824 172 154 0 chr10 14140722 14140891 -126175874 + AluSg/x SINE Alu 93 287 -23 203 285 160 42 chr10 14141259 14141403 -126175362 - MIR SINE MIR -6 256 96 1975 148 0 0 chr10 14142470 14142774 -126173991 + AluSx SINE Alu 1 304 -8 1491 134 21 124 chr10 14142943 14143323 -126173442 + MLT1B LTR MaLR 1 341 -49 386 320 13 7 chr10 14143850 14144003 -126172762 - MIR SINE MIR -38 224 71 868 132 0 0 chr10 14144217 14144346 -126172419 + FLAM_C SINE Alu 5 133 0 449 267 43 25 chr10 14144376 14144537 -126172228 + MER5C DNA MER1_type 51 214 -110 2266 78 0 3 chr10 14144581 14144876 -126171889 + AluSg1 SINE Alu 1 294 -15 214 62 31 0 chr10 14144880 14144912 -126171853 + MER5C DNA MER1_type 292 324 0 580 143 0 0 chr10 14145139 14145230 -126171535 - AluJb SINE Alu -14 298 208 630 241 81 17 chr10 14145242 14145416 -126171349 + MIR SINE MIR 78 262 0 2135 114 0 0 chr10 14145548 14145845 -126170920 - AluSx SINE Alu -13 299 3 3252 134 39 19 chr10 14146106 14146269 -126170496 - MER1A DNA MER1_type -2174 526 368 2199 105 3 0 chr10 14146269 14146574 -126170191 + AluSp SINE Alu 1 306 -7 3252 134 39 19 chr10 14146574 14146926 -126169839 - MER1A DNA MER1_type -2332 368 1 1748 191 41 26 chr10 14147502 14147847 -126168918 - MLT1A1 LTR MaLR -12 353 4 2121 109 3 13 chr10 14149251 14149562 -126167203 - AluSx SINE Alu -4 308 1 25 31 0 0 chr10 14150099 14150131 -126166634 + AT_rich Low_complexity Low_complexity 1 32 0 634 192 56 8 chr10 14150144 14150269 -126166496 + FLAM_C SINE Alu 2 132 -11 529 196 11 0 chr10 14150319 14150411 -126166354 - Tigger7 DNA MER2_type -1 2490 2398 1163 236 78 0 chr10 14150456 14150698 -126166067 - Tigger7 DNA MER2_type -470 263 3 1109 238 81 36 chr10 14150698 14151055 -126165710 - MLT1A2 LTR MaLR 0 374 2 313 51 0 0 chr10 14151144 14151183 -126165582 - U6 snRNA snRNA -68 39 1 496 194 108 0 chr10 14151611 14151704 -126165061 - AluJb SINE Alu -132 180 78 1408 137 5 0 chr10 14151704 14151915 -126164850 - AluSx SINE Alu -100 212 1 1811 153 0 11 chr10 14152079 14152366 -126164399 - AluJb SINE Alu -28 284 1 1738 145 66 7 chr10 14152366 14152670 -126164095 + L1MB3 LINE L1 5817 6138 -45 248 88 0 0 chr10 14152670 14152704 -126164061 + AluSx SINE Alu 1 34 -265 1279 109 62 0 chr10 14152704 14152897 -126163868 - LTR12 LTR ERV1 -133 581 377 359 233 29 19 chr10 14152898 14153001 -126163764 - LTR30 LTR ERV1 -80 642 539 7384 102 34 43 chr10 14153001 14154735 -126162030 - pTR5 LTR ERV1 0 8399 504 321 194 0 0 chr10 14154731 14154793 -126161972 - HERV9 LTR ERV1 -835 7564 7503 * 713 191 101 14 chr10 14154791 14155069 -126161696 - HERV9 LTR ERV1 -5755 1141 840 1880 112 0 14 chr10 14155099 14155375 -126161390 + AluSx SINE Alu 24 295 -17 306 102 0 0 chr10 14155375 14155424 -126161341 + L1MB4 LINE L1 6131 6179 -1 273 282 48 10 chr10 14155525 14155628 -126161137 + Charlie2b DNA MER1_type 577 683 -2099 400 241 260 49 chr10 14155675 14155887 -126160878 + Charlie2 DNA MER1_type 1472 1638 -1224 2275 88 0 0 chr10 14155887 14156184 -126160581 + AluSx SINE Alu 1 297 -15 400 241 260 49 chr10 14156184 14156284 -126160481 + Charlie2 DNA MER1_type 1638 1716 -1146 1587 186 3 10 chr10 14156284 14156580 -126160185 + AluJb SINE Alu 1 294 -18 400 241 260 49 chr10 14156580 14156693 -126160072 + Charlie2 DNA MER1_type 1716 1988 -874 180 112 34 56 chr10 14156693 14156782 -126159983 + (TTATA)n Simple_repeat Simple_repeat 2 88 0 2232 220 69 62 chr10 14156812 14157666 -126159099 + Charlie2 DNA MER1_type 1975 2834 -28 381 188 24 0 chr10 14157744 14157829 -126158936 + L1M4 LINE L1 2693 2779 -3367 205 182 0 23 chr10 14157836 14157880 -126158885 + (ATAAG)n Simple_repeat Simple_repeat 2 44 0 1852 190 37 16 chr10 14157888 14158262 -126158503 + MSTD LTR MaLR 15 396 0 243 169 247 26 chr10 14158267 14158344 -126158421 + L1M4 LINE L1 2784 2877 -3269 286 132 57 0 chr10 14158442 14158495 -126158270 + L1M4 LINE L1 2854 2909 -3237 3067 199 71 161 chr10 14158498 14158631 -126158134 + L1M4 LINE L1 3073 3216 -2930 2144 135 0 0 chr10 14158631 14158943 -126157822 - AluSx SINE Alu 0 312 1 3067 199 71 161 chr10 14158943 14159354 -126157411 + L1M4 LINE L1 3216 3663 -2483 1115 191 9 27 chr10 14159354 14159579 -126157186 + AluJo SINE Alu 1 221 -91 3067 199 71 161 chr10 14159579 14160560 -126156205 + L1M4 LINE L1 3663 4638 -1508 2073 98 3 19 chr10 14160560 14160867 -126155898 + AluSx SINE Alu 1 302 -10 3067 199 71 161 chr10 14160867 14161028 -126155737 + L1M4 LINE L1 4638 4812 -1334 696 243 201 36 chr10 14161224 14161442 -126155323 + L1M4 LINE L1 4834 5015 -1131 1496 168 10 45 chr10 14161442 14161734 -126155031 + AluJb SINE Alu 7 288 -24 696 243 201 36 chr10 14161734 14161993 -126154772 + L1M4 LINE L1 5015 5390 -756 1824 162 0 0 chr10 14162155 14162457 -126154308 - AluSx SINE Alu -4 308 7 233 29 29 0 chr10 14162468 14162502 -126154263 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1353 173 94 0 chr10 14162502 14162643 -126154122 - AluJb SINE Alu -33 279 153 189 0 0 0 chr10 14162643 14162664 -126154101 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1353 173 94 0 chr10 14162664 14162777 -126153988 - AluJb SINE Alu -159 153 1 348 80 0 0 chr10 14163291 14163341 -126153424 + FLAM_A SINE Alu 84 133 0 1680 141 52 10 chr10 14163377 14163667 -126153098 - AluSx SINE Alu -4 308 7 2129 120 3 0 chr10 14164078 14164378 -126152387 + AluSx SINE Alu 1 301 -11 2303 94 0 0 chr10 14164595 14164902 -126151863 + AluSq SINE Alu 1 307 -6 2265 146 22 0 chr10 14164987 14165343 -126151422 + THE1B LTR MaLR 1 364 0 548 141 38 169 chr10 14165473 14165657 -126151108 + MER103 DNA DNA 6 165 -1 2114 115 3 0 chr10 14166662 14166966 -126149799 + AluSx SINE Alu 1 305 -7 2125 110 0 3 chr10 14167027 14167326 -126149439 - AluSx SINE Alu -14 298 1 381 303 42 8 chr10 14167380 14167499 -126149266 + MER5B DNA MER1_type 1 123 -55 438 212 15 4 chr10 14167502 14167634 -126149131 - AluJ/FRAM SINE Alu 0 312 132 1361 151 7 75 chr10 14167634 14167800 -126148965 - AluJo SINE Alu -11 301 125 2291 72 0 23 chr10 14167800 14168105 -126148660 - AluY SINE Alu -13 298 1 1732 157 13 0 chr10 14168105 14168404 -126148361 - AluJb SINE Alu -9 303 1 1361 151 7 75 chr10 14168404 14168515 -126148250 - AluJo SINE Alu -185 127 42 1979 130 0 0 chr10 14169363 14169687 -126147078 - AluSx SINE Alu 0 324 1 2296 97 0 0 chr10 14170317 14170626 -126146139 + AluSg SINE Alu 1 309 -1 1528 163 6 47 chr10 14170882 14171053 -126145712 - AluJo SINE Alu -5 307 131 474 33 0 0 chr10 14171053 14171113 -126145652 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2058 113 3 0 chr10 14171113 14171396 -126145369 - AluSp SINE Alu -29 284 1 1528 163 6 47 chr10 14171396 14171543 -126145222 - AluJo SINE Alu -179 133 1 276 122 0 0 chr10 14171753 14171794 -126144971 - MER67D LTR ERV1 -28 486 446 1668 151 3 20 chr10 14171795 14172087 -126144678 + AluJo SINE Alu 1 287 -25 723 142 4 177 chr10 14172106 14172211 -126144554 - MER67D LTR ERV1 -327 187 140 1577 169 0 43 chr10 14172211 14172536 -126144229 - AluJo SINE Alu -1 311 1 723 142 4 177 chr10 14172536 14172656 -126144109 - MER67D LTR ERV1 -374 140 1 240 264 217 19 chr10 14172845 14172951 -126143814 - L2 LINE L2 -8 3264 3138 1964 114 24 0 chr10 14172983 14173273 -126143492 + AluSx SINE Alu 1 297 -15 2980 160 16 25 chr10 14173274 14173522 -126143243 + L1MB8 LINE L1 5575 5824 -354 2225 108 0 0 chr10 14173522 14173827 -126142938 + AluSq SINE Alu 2 306 -7 2980 160 16 25 chr10 14173827 14174134 -126142631 + L1MB8 LINE L1 5824 6125 -53 1230 89 6 0 chr10 14174161 14174329 -126142436 - AluSx SINE Alu -143 169 1 331 134 15 30 chr10 14174329 14174396 -126142369 + L1MB8 LINE L1 6111 6176 -2 547 295 156 9 chr10 14174681 14174905 -126141860 + MIR SINE MIR 1 257 -5 265 322 98 51 chr10 14175010 14175305 -126141460 - L2 LINE L2 -683 2631 2323 2040 96 34 0 chr10 14175308 14175479 -126141286 - AluSg SINE Alu -9 301 114 279 0 0 0 chr10 14175479 14175510 -126141255 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2040 96 34 0 chr10 14175510 14175629 -126141136 - AluSg SINE Alu -196 114 1 2368 65 0 0 chr10 14176054 14176346 -126140419 - AluSp SINE Alu -21 292 1 635 238 26 90 chr10 14177154 14177280 -126139485 - MER5B DNA MER1_type -1 177 65 2389 78 0 0 chr10 14177280 14177589 -126139176 - AluSc SINE Alu 0 309 1 635 238 26 90 chr10 14177589 14177651 -126139114 - MER5B DNA MER1_type -113 65 1 1164 123 0 0 chr10 14180393 14180563 -126136202 - AluSg/x SINE Alu -10 300 131 2119 129 0 0 chr10 14180622 14180932 -126135833 + AluSx SINE Alu 1 310 -2 323 233 14 0 chr10 14182328 14182401 -126134364 - L2 LINE L2 0 3313 3240 230 280 0 0 chr10 14182998 14183048 -126133717 - L2 LINE L2 -1 3271 3222 289 326 31 10 chr10 14183736 14183834 -126132931 + MIR3 SINE MIR 108 207 -1 2069 103 0 0 chr10 14185628 14185946 -126130819 - AluSx SINE Alu 0 318 1 417 214 0 0 chr10 14186052 14186122 -126130643 - MER2 DNA MER2_type -8 337 268 1358 174 66 4 chr10 14186224 14186366 -126130399 - AluJo SINE Alu -38 274 142 225 65 0 0 chr10 14186366 14186397 -126130368 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1358 174 66 4 chr10 14186397 14186512 -126130253 - AluJo SINE Alu -170 142 1 385 158 0 0 chr10 14186512 14186569 -126130196 - MER2 DNA MER2_type -260 85 29 368 320 47 0 chr10 14186900 14187050 -126129715 - L1ME LINE L1 -452 5669 5513 2157 20 12 0 chr10 14188972 14189223 -126127542 + L1PA4 LINE L1 5901 6154 -1 389 86 17 0 chr10 14189274 14189332 -126127433 + L1M2 LINE L1 5547 5605 -695 493 101 0 119 chr10 14189332 14189425 -126127340 + FLAM_A SINE Alu 35 115 -196 219 36 0 0 chr10 14189425 14189453 -126127312 + (CA)n Simple_repeat Simple_repeat 2 29 0 493 101 0 119 chr10 14189453 14189468 -126127297 + FLAM_A SINE Alu 115 130 -181 540 291 157 5 chr10 14189853 14190076 -126126689 + MIR SINE MIR 6 262 0 357 257 95 40 chr10 14190177 14190325 -126126440 - L1ME4a LINE L1 -4 6117 5962 2117 46 8 0 chr10 14190408 14190669 -126126096 - AluY SINE Alu -11 300 38 2140 24 0 0 chr10 14191617 14191864 -126124901 + AluY SINE Alu 60 306 -5 259 310 23 0 chr10 14193310 14193397 -126123368 + MIR3 SINE MIR 109 197 -11 577 197 49 115 chr10 14193758 14193941 -126122824 - MIR3 SINE MIR -11 197 27 2442 46 0 13 chr10 14194283 14194588 -126122177 + AluY SINE Alu 1 301 -10 363 333 58 0 chr10 14197506 14197644 -126119121 - MIR SINE MIR -44 218 73 651 154 0 10 chr10 14199035 14199139 -126117626 - FLAM_A SINE Alu -12 130 28 371 302 91 89 chr10 14199459 14199820 -126116945 - L2 LINE L2 0 3272 2911 409 317 163 62 chr10 14199838 14200053 -126116712 + L1MEd LINE L1 213 405 -5714 2282 108 0 0 chr10 14200053 14200348 -126116417 + AluSx SINE Alu 1 295 -17 409 317 163 62 chr10 14200348 14200646 -126116119 + L1MEd LINE L1 405 778 -5341 651 267 90 35 chr10 14200714 14200779 -126115986 + L1MEd LINE L1 875 935 -5184 2541 104 28 3 chr10 14200779 14201134 -126115631 - THE1B LTR MaLR 0 364 1 651 267 90 35 chr10 14201134 14201413 -126115352 + L1MEd LINE L1 935 1238 -4881 776 102 94 8 chr10 14201725 14201852 -126114913 + MER85 DNA T2_type 2 139 0 312 215 74 60 chr10 14202106 14202310 -126114455 + L1 LINE L1 4904 5110 -1036 426 340 100 8 chr10 14202435 14202814 -126113951 + L1ME LINE L1 5272 5685 -485 226 259 0 0 chr10 14203550 14203608 -126113157 + L2 LINE L2 3000 3057 -215 2081 127 10 0 chr10 14204884 14205176 -126111589 + AluSx SINE Alu 1 295 -17 198 103 0 0 chr10 14206454 14206483 -126110282 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 200 345 26 17 chr10 14206484 14206600 -126110165 - L2 LINE L2 -18 3295 3179 364 295 16 23 chr10 14206621 14206750 -126110015 - MER94 DNA DNA -5 129 2 2238 102 0 0 chr10 14208095 14208379 -126108386 - AluSc SINE Alu -25 284 1 590 260 73 0 chr10 14208806 14208983 -126107782 - MER91B DNA MER1_type 0 190 1 182 315 0 0 chr10 14209626 14209680 -126107085 + L2 LINE L2 2998 3051 -262 408 240 110 20 chr10 14212700 14212846 -126103919 + MER5A DNA MER1_type 31 189 0 337 294 32 16 chr10 14213586 14213712 -126103053 + MIR SINE MIR 29 156 -106 21 0 0 0 chr10 14214699 14214720 -126102045 + AT_rich Low_complexity Low_complexity 1 21 0 635 223 126 49 chr10 14215680 14216108 -126100657 - LTR48 LTR ERV1 0 787 128 423 287 0 26 chr10 14216081 14216196 -126100569 - MER34 LTR ERV1 -430 112 1 * 23 0 0 0 chr10 14216441 14216464 -126100301 + AT_rich Low_complexity Low_complexity 1 23 0 2149 119 0 7 chr10 14216785 14217087 -126099678 - AluSx SINE Alu -12 300 1 2611 233 69 46 chr10 14217676 14218223 -126098542 - L1ME3 LINE L1 -9 6153 5577 2233 122 0 3 chr10 14218223 14218526 -126098239 - AluSx SINE Alu -10 302 1 2611 233 69 46 chr10 14218526 14218828 -126097937 - L1ME3 LINE L1 -585 5577 5284 2283 95 0 3 chr10 14218828 14219123 -126097642 + AluSq SINE Alu 1 294 -19 225 148 93 0 chr10 14219126 14219180 -126097585 + HSMAR1 DNA Mariner 1 59 -1228 1263 202 53 116 chr10 14219357 14219868 -126096897 - MLT1D LTR MaLR 0 505 27 307 298 43 0 chr10 14220299 14220393 -126096372 + MIR SINE MIR 1 98 -164 332 229 30 69 chr10 14220435 14220566 -126096199 - LTR41 LTR ERVL -49 724 599 294 239 87 0 chr10 14220977 14221069 -126095696 + MIR SINE MIR 114 213 -49 2222 118 3 10 chr10 14221229 14221543 -126095222 + AluSx SINE Alu 1 312 0 634 244 54 32 chr10 14221735 14221956 -126094809 - L2 LINE L2 0 3313 3088 3212 78 93 84 chr10 14221973 14222283 -126094482 + MER41A LTR ERV1 1 320 -234 2636 54 0 13 chr10 14222283 14222597 -126094168 + AluY SINE Alu 1 310 -1 3212 78 93 84 chr10 14222597 14222835 -126093930 + MER41A LTR ERV1 320 554 0 225 108 0 0 chr10 14222856 14222893 -126093872 + (TGG)n Simple_repeat Simple_repeat 2 38 0 1086 288 113 19 chr10 14273033 14273671 -126043094 - L1MEc LINE L1 -4722 1674 977 374 216 0 9 chr10 14273747 14273863 -126042902 + CT-rich Low_complexity Low_complexity 4 118 0 648 286 9 74 chr10 14273866 14274191 -126042574 - L1MEc LINE L1 -6015 381 78 2137 128 7 0 chr10 14274485 14274782 -126041983 + AluSx SINE Alu 1 299 -13 383 312 105 55 chr10 14274977 14275538 -126041227 - L1 LINE L1 -1756 4390 3858 213 94 0 0 chr10 14275538 14275570 -126041195 + (TG)n Simple_repeat Simple_repeat 2 33 0 2011 130 0 0 chr10 14275570 14275854 -126040911 - AluY SINE Alu -27 284 1 383 312 105 55 chr10 14275854 14276059 -126040706 - L1 LINE L1 -2287 3859 3585 6014 177 59 65 chr10 14276082 14276626 -126040139 + Charlie1a DNA MER1_type 49 595 -2166 4958 65 22 0 chr10 14276626 14277225 -126039540 - L1PA7 LINE L1 0 6154 5543 6014 177 59 65 chr10 14277225 14277395 -126039370 + Charlie1a DNA MER1_type 595 764 -1997 2078 114 38 0 chr10 14277395 14277685 -126039080 + AluSx SINE Alu 1 301 -11 6014 177 59 65 chr10 14277685 14278378 -126038387 + Charlie1a DNA MER1_type 764 1449 -6 304 294 78 39 chr10 14278402 14278668 -126038097 - L1 LINE L1 -2573 3573 3292 2344 109 3 0 chr10 14278668 14278979 -126037786 - AluSx SINE Alu 0 312 1 304 294 78 39 chr10 14278979 14279021 -126037744 - L1 LINE L1 -2854 3292 3253 2297 113 0 0 chr10 14279313 14279615 -126037150 - AluSq SINE Alu -9 304 3 764 258 56 30 chr10 14279818 14280085 -126036680 - LTR16A LTR ERVL -58 392 119 341 234 32 32 chr10 14280240 14280334 -126036431 - HsTC2 DNA Tc2 -1804 94 1 1409 189 47 17 chr10 14280560 14280861 -126035904 + MER63C DNA MER1_type 1 310 -620 834 168 114 0 chr10 14281256 14281405 -126035360 - MER5A DNA MER1_type 0 189 24 2046 131 0 0 chr10 14281668 14281950 -126034815 + AluSx SINE Alu 1 282 -30 1452 177 13 55 chr10 14283099 14283409 -126033356 + AluJo SINE Alu 7 303 -9 993 174 40 5 chr10 14283651 14283852 -126032913 + MER63C DNA MER1_type 277 484 -446 1857 123 0 0 chr10 14283854 14284106 -126032659 + AluSx SINE Alu 37 288 -24 21 0 0 0 chr10 14284109 14284130 -126032635 + AT_rich Low_complexity Low_complexity 1 21 0 431 242 32 48 chr10 14284130 14284254 -126032511 + MER20 DNA MER1_type 1 122 -97 519 118 147 10 chr10 14284300 14284402 -126032363 + MER63C DNA MER1_type 480 595 -335 2415 153 53 79 chr10 14284403 14284618 -126032147 + MLT2B2 LTR ERVL 1 220 -295 706 143 76 0 chr10 14284618 14284737 -126032028 - FLAM_C SINE Alu -5 128 1 2415 153 53 79 chr10 14284737 14285050 -126031715 + MLT2B2 LTR ERVL 220 515 0 1328 230 44 0 chr10 14285050 14285361 -126031404 + MER63C DNA MER1_type 592 916 -14 906 254 0 0 chr10 14285747 14285936 -126030829 + MER5A DNA MER1_type 1 189 0 858 243 44 47 chr10 14286529 14286867 -126029898 - L1ME4a LINE L1 -69 6052 5716 879 189 0 0 chr10 14286873 14287026 -126029739 - FRAM SINE Alu -11 165 13 2374 79 23 0 chr10 14287152 14287456 -126029309 - AluSx SINE Alu -1 311 1 2146 117 0 0 chr10 14287925 14288234 -126028531 - AluSx SINE Alu 0 309 1 3514 139 19 3 chr10 14289523 14290113 -126026652 + MER51C LTR ERV1 1 639 -1 2247 70 35 0 chr10 14290333 14290619 -126026146 + AluSx SINE Alu 2 297 -15 1167 126 6 0 chr10 14290626 14290801 -126025964 + FRAM SINE Alu 1 174 -2 888 164 13 19 chr10 14291017 14291176 -126025589 - Charlie1a DNA MER1_type -4 1451 1294 * 2392 184 68 17 chr10 14291160 14291702 -126025063 - Charlie1a DNA MER1_type -629 826 257 698 239 72 11 chr10 14291719 14291899 -126024866 - Charlie1a DNA MER1_type -1249 206 16 23 0 0 0 chr10 14292348 14292371 -126024394 + AT_rich Low_complexity Low_complexity 1 23 0 2272 71 27 17 chr10 14292521 14292650 -126024115 + AluY SINE Alu 1 127 -184 180 0 0 0 chr10 14292650 14292670 -126024095 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 71 27 17 chr10 14292670 14292836 -126023929 + AluY SINE Alu 127 299 -12 494 246 30 22 chr10 14292916 14293050 -126023715 - MIR SINE MIR -112 150 16 191 291 127 27 chr10 14293225 14293335 -126023430 - MIR SINE MIR -122 140 20 616 266 57 13 chr10 14295073 14295302 -126021463 + L1M4 LINE L1 4745 4983 -1163 338 327 203 22 chr10 14295473 14296168 -126020597 - L2 LINE L2 -1252 2062 1242 4981 180 169 19 chr10 14296225 14297477 -126019288 - Charlie1a DNA MER1_type -8 1447 8 242 288 67 34 chr10 14297724 14297903 -126018862 + MIR SINE MIR 9 191 -51 355 290 99 86 chr10 14298292 14298606 -126018159 - L1MC4 LINE L1 -395 7647 7330 248 125 31 94 chr10 14298628 14298692 -126018073 - L1MC4 LINE L1 -812 7230 7171 544 212 35 0 chr10 14298960 14299073 -126017692 + AluJb SINE Alu 191 307 -5 23 0 0 0 chr10 14299993 14300016 -126016749 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 14300767 14300797 -126015968 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 14302817 14302850 -126013915 + AT_rich Low_complexity Low_complexity 1 33 0 736 270 72 65 chr10 14302850 14302968 -126013797 - L1ME4a LINE L1 -224 5897 5781 2318 107 0 13 chr10 14302968 14303278 -126013487 - AluSx SINE Alu -6 306 1 736 270 72 65 chr10 14303278 14303574 -126013191 - L1ME4a LINE L1 -340 5781 5480 425 239 145 19 chr10 14303888 14304047 -126012718 + MIR SINE MIR 84 262 0 669 266 57 87 chr10 14304063 14304522 -126012243 - L1MC/D LINE L1 -2032 5776 5332 1877 146 3 0 chr10 14304942 14305229 -126011536 - AluSx SINE Alu -24 288 1 243 0 0 0 chr10 14305492 14305519 -126011246 + (TGG)n Simple_repeat Simple_repeat 2 28 0 231 371 67 9 chr10 14305545 14305650 -126011115 - L3b LINE CR1 -1 1582 1472 966 273 142 33 chr10 14305889 14306405 -126010360 + L3 LINE CR1 997 1568 -9 226 306 71 0 chr10 14306620 14306705 -126010060 - L1ME3A LINE L1 -67 6103 6013 2377 73 7 3 chr10 14307499 14307800 -126008965 + AluSc SINE Alu 1 302 -7 1857 207 162 81 chr10 14308086 14308201 -126008564 - L1ME2 LINE L1 -32 6132 6028 1120 86 40 0 chr10 14308201 14308352 -126008413 + L1PA11 LINE L1 6014 6170 -4 1857 207 162 81 chr10 14308352 14308652 -126008113 - L1ME2 LINE L1 -136 6028 5754 2510 79 0 0 chr10 14308652 14308956 -126007809 + AluSc SINE Alu 1 304 -5 1857 207 162 81 chr10 14308956 14309279 -126007486 - L1ME2 LINE L1 -410 5754 5333 855 211 0 0 chr10 14309280 14309436 -126007329 - AluJb SINE Alu -3 309 154 899 199 24 127 chr10 14309438 14309628 -126007137 - L1ME2 LINE L1 -816 5330 5195 1498 154 28 0 chr10 14309628 14309875 -126006890 - AluJo SINE Alu -25 287 34 899 199 24 127 chr10 14309875 14310055 -126006710 - L1ME2 LINE L1 -951 5195 4998 558 212 171 0 chr10 14310054 14310224 -126006541 - L1ME2 LINE L1 -3399 2747 2549 * 247 209 0 0 chr10 14310224 14310267 -126006498 - MLT1F LTR MaLR -6 549 507 268 274 89 54 chr10 14310313 14310481 -126006284 - MLT1F LTR MaLR -15 527 354 305 400 34 8 chr10 14310989 14311224 -126005541 + MIR SINE MIR 12 252 -10 462 303 117 6 chr10 14311467 14311629 -126005136 - MIR SINE MIR -78 184 5 381 277 86 53 chr10 14312661 14313108 -126003657 - L1ME3A LINE L1 -222 5940 5461 891 171 24 0 chr10 14313431 14313595 -126003170 - L1MB7 LINE L1 0 6184 6017 2265 117 0 0 chr10 14314083 14314381 -126002384 - AluSq SINE Alu -15 298 1 1641 136 81 7 chr10 14314482 14314632 -126002133 - AluSx SINE Alu -20 292 154 224 30 30 0 chr10 14314632 14314665 -126002100 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1641 136 81 7 chr10 14314665 14314786 -126001979 - AluSx SINE Alu -158 154 1 854 150 133 23 chr10 14314824 14314997 -126001768 - AluJo SINE Alu -4 308 117 553 323 86 33 chr10 14320069 14320465 -125996300 + L3 LINE CR1 398 814 -763 1847 163 40 0 chr10 14320547 14320847 -125995918 + AluJo SINE Alu 1 312 0 409 259 0 0 chr10 14320938 14321019 -125995746 + L2 LINE L2 3233 3313 0 1828 147 58 25 chr10 14321112 14321438 -125995327 - MER1B DNA MER1_type 0 337 1 286 156 31 16 chr10 14321526 14321590 -125995175 - L1MD2 LINE L1 -1 6358 6294 475 216 58 64 chr10 14321956 14322127 -125994638 - Charlie8 DNA MER1_type -2208 209 40 555 242 242 0 chr10 14322340 14322518 -125994247 - MER58A DNA MER1_type 0 224 4 645 200 68 63 chr10 14322671 14322876 -125993889 - L1ME3 LINE L1 -42 6120 5915 942 310 68 2 chr10 14323408 14323805 -125992960 + LTR33 LTR ERVL 20 442 -79 2556 46 0 10 chr10 14325118 14325422 -125991343 + AluY SINE Alu 1 301 -10 394 68 85 0 chr10 14326119 14326178 -125990587 - L1MB2 LINE L1 -7 6164 6101 1697 152 35 10 chr10 14326189 14326479 -125990286 - AluSx SINE Alu -15 297 1 2261 239 119 109 chr10 14326804 14327253 -125989512 + HAL1 LINE L1 520 963 -1544 1722 132 82 0 chr10 14327253 14327533 -125989232 + AluJo SINE Alu 1 303 -9 2261 239 119 109 chr10 14327533 14328983 -125987782 + HAL1 LINE L1 963 2438 -69 1148 260 43 11 chr10 14329035 14329385 -125987380 + L2 LINE L2 2444 2804 -510 608 273 41 23 chr10 14329373 14329593 -125987172 + L2 LINE L2 3084 3307 -6 * 1453 169 113 3 chr10 14330535 14330837 -125985928 + MER2 DNA MER2_type 1 335 -10 912 312 129 23 chr10 14330953 14331559 -125985206 + L3 LINE CR1 433 1102 -475 722 276 35 47 chr10 14331805 14331916 -125984849 - L1ME3A LINE L1 -214 5956 5845 1091 154 19 43 chr10 14331916 14332124 -125984641 - MER105 DNA DNA -1 203 1 722 276 35 47 chr10 14332124 14332353 -125984412 - L1ME3A LINE L1 -325 5845 5620 244 260 130 13 chr10 14332355 14332432 -125984333 + L3 LINE CR1 1092 1177 -400 31 0 0 0 chr10 14332939 14332970 -125983795 + AT_rich Low_complexity Low_complexity 1 31 0 564 275 103 24 chr10 14333540 14333790 -125982975 + MIR SINE MIR 3 261 -1 2395 57 0 0 chr10 14334261 14334540 -125982225 + AluY SINE Alu 1 279 -32 572 237 136 35 chr10 14336851 14337079 -125979686 + MER112 DNA MER1_type 8 258 -2 6285 98 3 6 chr10 14337079 14337951 -125978814 - L1PA11 LINE L1 -2 6172 5303 1943 141 11 0 chr10 14338342 14338626 -125978139 + AluJb SINE Alu 1 287 -25 470 192 128 84 chr10 14338783 14338986 -125977779 - L1ME3A LINE L1 -5 6165 5954 600 145 96 7 chr10 14338987 14339128 -125977637 - L1MB8 LINE L1 0 6184 6025 1532 232 129 46 chr10 14339145 14339817 -125976948 - L1ME3A LINE L1 -216 5946 5206 346 291 47 58 chr10 14340137 14340490 -125976275 + MLT1L LTR MaLR 1 349 -162 195 42 0 0 chr10 14340497 14340521 -125976244 + (T)n Simple_repeat Simple_repeat 1 24 0 2141 209 39 50 chr10 14340564 14341082 -125975683 - MLT2B1 LTR ERVL -8 512 1 1219 248 198 7 chr10 14341914 14342474 -125974291 + LTR50 LTR ERVL 2 668 -127 217 204 51 92 chr10 14343304 14343402 -125973363 + L2 LINE L2 3142 3235 -78 2217 237 53 43 chr10 14343408 14344101 -125972664 - L2 LINE L2 -819 2495 1796 24 32 0 0 chr10 14348381 14348412 -125968353 + AT_rich Low_complexity Low_complexity 1 31 0 444 248 153 19 chr10 14349365 14349522 -125967243 - MER5B DNA MER1_type 0 178 1 238 172 140 75 chr10 14351006 14351099 -125965666 - MER103 DNA DNA -2 164 66 245 231 0 51 chr10 14352447 14352525 -125964240 + (TATG)n Simple_repeat Simple_repeat 2 75 0 255 186 0 0 chr10 14352791 14352834 -125963931 - HERVL LTR ERVL -5195 459 417 287 232 14 0 chr10 14353217 14353286 -125963479 - MER5A DNA MER1_type -87 102 33 1434 113 96 29 chr10 14353515 14353755 -125963010 + AluSx SINE Alu 36 291 -21 777 209 11 39 chr10 14354812 14354994 -125961771 - MER5A DNA MER1_type 0 189 13 418 332 100 26 chr10 14355002 14355231 -125961534 + MIR SINE MIR 9 254 -8 1754 120 76 0 chr10 14355323 14355573 -125961192 + AluSx SINE Alu 21 289 -23 1507 185 67 20 chr10 14357998 14358296 -125958469 + AluJo SINE Alu 1 312 0 2313 119 0 3 chr10 14358732 14359043 -125957722 + AluSx SINE Alu 1 310 -2 186 208 0 0 chr10 14360840 14360888 -125955877 + (CAAGC)n Simple_repeat Simple_repeat 4 51 0 276 228 174 65 chr10 14361087 14361179 -125955586 + L2 LINE L2 3212 3313 0 214 200 0 0 chr10 14362471 14362511 -125954254 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1661 133 82 14 chr10 14363056 14363335 -125953430 + AluJb SINE Alu 1 298 -14 232 344 12 28 chr10 14364171 14364348 -125952417 - MIR SINE MIR -59 149 19 1058 152 1 111 chr10 14364789 14364834 -125951931 - L1MB3 LINE L1 -6 6177 6129 938 219 18 0 chr10 14364834 14365003 -125951762 - FAM SINE Alu -3 172 1 2277 89 38 0 chr10 14365010 14365301 -125951464 - AluSp SINE Alu -11 302 1 1058 152 1 111 chr10 14365301 14365526 -125951239 - L1MB3 LINE L1 -60 6123 5930 2269 123 3 0 chr10 14367030 14367340 -125949425 - AluSx SINE Alu -1 311 1 364 302 47 8 chr10 14369037 14369166 -125947599 - MIR SINE MIR -4 258 125 2146 106 19 32 chr10 14369185 14369497 -125947268 - AluSx SINE Alu -4 308 1 207 0 0 0 chr10 14369900 14369923 -125946842 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 103 0 0 chr10 14370678 14370707 -125946058 + (CA)n Simple_repeat Simple_repeat 2 30 0 206 205 48 121 chr10 14370907 14370990 -125945775 - L2 LINE L2 -1 3312 3236 * 244 308 0 13 chr10 14370961 14371039 -125945726 - MIR SINE MIR -169 93 17 2355 98 0 7 chr10 14371257 14371554 -125945211 + AluSx SINE Alu 1 295 -17 277 329 13 0 chr10 14372134 14372213 -125944552 + (TG)n Simple_repeat Simple_repeat 1 80 0 2071 138 27 0 chr10 14373854 14374152 -125942613 - AluJb SINE Alu -6 306 1 2231 102 10 0 chr10 14375490 14375785 -125940980 - AluSx SINE Alu -14 298 1 256 306 170 7 chr10 14375833 14375980 -125940785 - L1ME4a LINE L1 -2 6119 5949 280 342 33 26 chr10 14376151 14376303 -125940462 + L3b LINE CR1 1316 1468 -115 2379 69 6 41 chr10 14376339 14376659 -125940106 - AluSq SINE Alu -4 309 1 377 278 169 12 chr10 14376745 14377000 -125939765 + L1M4 LINE L1 4375 4669 -1477 212 325 146 16 chr10 14377437 14377560 -125939205 - L3b LINE CR1 -320 1263 1125 230 266 17 17 chr10 14378497 14378583 -125938182 + MIR SINE MIR 30 115 -93 1900 142 53 0 chr10 14378869 14379207 -125937558 - L1MA5A LINE L1 -3 6294 5939 2200 115 3 19 chr10 14379226 14379540 -125937225 + AluSg1 SINE Alu 1 309 0 333 0 0 0 chr10 14379558 14379595 -125937170 + (CA)n Simple_repeat Simple_repeat 2 38 0 884 124 23 0 chr10 14380258 14380387 -125936378 + AluJb SINE Alu 1 132 -180 2152 109 3 26 chr10 14380529 14380841 -125935924 + AluSg SINE Alu 1 305 -5 789 148 55 0 chr10 14380849 14380977 -125935788 + AluJo SINE Alu 2 136 -176 208 292 180 19 chr10 14381001 14381162 -125935603 + MIR3 SINE MIR 19 205 -3 291 114 0 0 chr10 14381631 14381675 -125935090 + (TA)n Simple_repeat Simple_repeat 2 45 0 631 316 42 0 chr10 14381788 14382006 -125934759 + MIR SINE MIR 37 262 0 1600 187 3 17 chr10 14382021 14382310 -125934455 + AluJo SINE Alu 1 285 -27 2346 104 0 28 chr10 14382573 14382891 -125933874 - AluSg SINE Alu -1 309 1 180 328 0 0 chr10 14382907 14382965 -125933800 - MIR SINE MIR -170 92 35 1022 70 23 0 chr10 14383139 14383267 -125933498 - AluSg/x SINE Alu -49 263 133 1741 178 0 38 chr10 14383386 14383700 -125933065 + AluJo SINE Alu 1 302 -10 2359 88 14 0 chr10 14383796 14384092 -125932673 - AluSx SINE Alu -12 300 1 853 113 40 0 chr10 14385770 14385894 -125930871 + FRAM SINE Alu 26 154 -22 2035 124 0 17 chr10 14387092 14387390 -125929375 + AluSx SINE Alu 1 293 -19 3624 42 0 0 chr10 14388204 14388638 -125928127 + L1PA4 LINE L1 5719 6152 -3 1765 168 44 13 chr10 14388788 14389086 -125927679 - AluSg SINE Alu -3 307 1 2044 112 4 0 chr10 14389395 14389663 -125927102 - AluSx SINE Alu -37 275 7 459 223 65 14 chr10 14389695 14389834 -125926931 - MER69 DNA AcHobo -1079 147 2 1808 124 20 36 chr10 14390087 14390393 -125926372 - AluJb SINE Alu -11 301 1 189 232 138 80 chr10 14390407 14390545 -125926220 + L2 LINE L2 2339 2484 -830 1462 141 33 0 chr10 14391870 14392083 -125924682 + AluJo SINE Alu 85 304 -8 2208 110 14 0 chr10 14392368 14392660 -125924105 - AluSx SINE Alu -16 296 1 375 273 67 77 chr10 14393638 14393680 -125923085 + MIR SINE MIR 16 57 -205 1953 125 7 30 chr10 14393680 14393977 -125922788 + AluSx SINE Alu 1 290 -22 375 273 67 77 chr10 14393977 14394128 -125922637 + MIR SINE MIR 57 207 -55 2043 122 30 10 chr10 14394372 14394667 -125922098 - AluSx SINE Alu -11 301 1 220 214 0 0 chr10 14395307 14395349 -125921416 + GA-rich Low_complexity Low_complexity 1 42 0 2006 121 0 65 chr10 14396274 14396596 -125920169 - AluSx SINE Alu -11 301 1 902 132 0 22 chr10 14397331 14397467 -125919298 - FLAM_C SINE Alu 0 133 1 225 0 0 0 chr10 14398040 14398065 -125918700 + (T)n Simple_repeat Simple_repeat 1 25 0 1827 148 31 3 chr10 14399293 14399583 -125917182 - AluSx SINE Alu -14 298 1 288 154 0 0 chr10 14399748 14399800 -125916965 + (TG)n Simple_repeat Simple_repeat 1 52 0 681 212 28 22 chr10 14400931 14400989 -125915776 + L1MA4A LINE L1 6124 6180 -123 1913 100 0 0 chr10 14400989 14401255 -125915510 + AluSc SINE Alu 47 312 0 681 212 28 22 chr10 14401255 14401372 -125915393 + L1MA4A LINE L1 6180 6303 0 442 254 7 58 chr10 14401863 14402001 -125914764 + MIR SINE MIR 4 134 -128 1821 150 11 21 chr10 14402015 14402301 -125914464 + AluJo SINE Alu 9 291 -21 294 87 0 0 chr10 14404185 14404231 -125912534 + (CA)n Simple_repeat Simple_repeat 2 47 0 237 65 0 0 chr10 14404709 14404740 -125912025 + (CA)n Simple_repeat Simple_repeat 2 32 0 392 340 0 33 chr10 14406355 14406421 -125910344 + MIR SINE MIR 8 75 -187 2084 129 0 3 chr10 14406421 14406715 -125910050 - AluSx SINE Alu -19 293 1 392 340 0 33 chr10 14406715 14406798 -125909967 + MIR SINE MIR 75 152 -110 418 219 114 0 chr10 14407177 14407282 -125909483 + MER45 DNA AcHobo 1 117 -61 723 108 45 0 chr10 14407344 14407455 -125909310 - L1PB1 LINE L1 -4 6147 6032 336 188 0 0 chr10 14407464 14407528 -125909237 + MER45 DNA AcHobo 1518 1581 0 2060 151 0 3 chr10 14408182 14408486 -125908279 + AluSx SINE Alu 1 303 -9 325 246 85 17 chr10 14409245 14409363 -125907402 - MIR SINE MIR -135 127 2 2161 132 26 0 chr10 14409691 14409995 -125906770 + AluSx SINE Alu 1 312 0 288 345 34 0 chr10 14410099 14410218 -125906547 + MIR3 SINE MIR 32 154 -54 352 300 108 8 chr10 14410660 14410790 -125905975 - MIR3 SINE MIR -47 161 19 346 291 71 57 chr10 14411167 14411308 -125905457 - L1MC4 LINE L1 -1286 6756 6614 * 364 239 33 33 chr10 14411269 14411361 -125905404 + L1MC4 LINE L1 6612 6703 -1339 343 259 158 67 chr10 14411333 14411520 -125905245 + L1MC4 LINE L1 5768 5937 -796 * 2153 106 0 11 chr10 14411520 14411802 -125904963 - AluSx SINE Alu -21 291 13 343 259 158 67 chr10 14411802 14411911 -125904854 + L1MC4 LINE L1 5937 6703 -30 2325 105 0 3 chr10 14412209 14412515 -125904250 + AluSg SINE Alu 1 305 -5 195 226 333 10 chr10 14412620 14412722 -125904043 + MIR SINE MIR 16 150 -58 683 242 172 14 chr10 14412850 14413065 -125903700 + MIR SINE MIR 1 249 -13 2142 122 3 3 chr10 14413084 14413380 -125903385 + AluSx SINE Alu 10 305 -7 192 333 11 33 chr10 14414497 14414587 -125902178 + MIR SINE MIR 42 129 -133 2202 136 0 13 chr10 14414752 14415062 -125901703 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 14415065 14415085 -125901680 + (T)n Simple_repeat Simple_repeat 1 20 0 295 264 14 14 chr10 14416357 14416429 -125900336 + L2 LINE L2 3201 3272 0 343 236 45 45 chr10 14416469 14416579 -125900186 - MIR SINE MIR -82 126 17 2272 110 0 0 chr10 14417506 14417797 -125898968 - AluSx SINE Alu -21 291 1 497 288 132 47 chr10 14417911 14418230 -125898535 - L2 LINE L2 -1 3312 2967 721 189 7 13 chr10 14418294 14418461 -125898304 + L1MB8 LINE L1 5772 5932 -250 548 130 0 20 chr10 14418569 14418669 -125898096 + L1MB8 LINE L1 5916 6013 -165 2172 119 3 0 chr10 14418772 14419066 -125897699 + AluSq SINE Alu 1 295 -18 1944 145 0 44 chr10 14419800 14420118 -125896647 - AluJo SINE Alu -8 304 1 259 287 0 44 chr10 14420398 14420579 -125896186 + (CTAG)n Simple_repeat Simple_repeat 1 173 0 285 289 0 39 chr10 14420629 14420809 -125895956 + (CTAG)n Simple_repeat Simple_repeat 4 176 0 1283 167 76 4 chr10 14420927 14421191 -125895574 + L1MB2 LINE L1 5889 6171 0 2403 72 0 0 chr10 14421679 14421971 -125894794 + AluY SINE Alu 1 292 -19 196 204 184 0 chr10 14422739 14422788 -125893977 - MIR3 SINE MIR -44 164 107 269 211 0 0 chr10 14423505 14423557 -125893208 - MIR SINE MIR -116 146 95 1413 137 5 0 chr10 14423652 14423885 -125892880 + AluJo SINE Alu 88 312 0 703 186 29 103 chr10 14424085 14424209 -125892556 - MER5A DNA MER1_type 0 189 57 1197 156 183 16 chr10 14424209 14424466 -125892299 - AluJo SINE Alu -2 300 1 2027 129 7 26 chr10 14424471 14424774 -125891991 - AluSx SINE Alu -15 297 1 703 186 29 103 chr10 14424774 14424847 -125891918 - MER5A DNA MER1_type -136 53 1 747 257 80 59 chr10 14424911 14425250 -125891515 + LTR16A LTR ERVL 105 450 0 651 111 0 0 chr10 14425368 14425458 -125891307 + 5S rRNA rRNA 1 90 -31 400 306 89 0 chr10 14425509 14425633 -125891132 + L2 LINE L2 3138 3272 0 2345 100 7 3 chr10 14426143 14426444 -125890321 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 14426660 14426684 -125890081 + GC_rich Low_complexity Low_complexity 1 24 0 2129 113 0 45 chr10 14428304 14428613 -125888152 + AluSx SINE Alu 1 295 -17 2444 92 0 0 chr10 14428939 14429242 -125887523 + AluSq SINE Alu 1 303 -10 185 286 107 48 chr10 14430469 14430637 -125886128 + MER5B DNA MER1_type 1 178 0 384 242 76 64 chr10 14430960 14431014 -125885751 + MER69A DNA AcHobo 19 71 -2455 1988 88 53 21 chr10 14431014 14431299 -125885466 - AluSq SINE Alu -19 294 1 384 242 76 64 chr10 14431299 14431401 -125885364 + MER69A DNA AcHobo 71 177 0 318 246 169 31 chr10 14431529 14431724 -125885041 + L2 LINE L2 2263 2484 -830 220 224 0 132 chr10 14432346 14432392 -125884373 + L2 LINE L2 3248 3282 -31 2357 102 3 0 chr10 14432392 14432745 -125884020 - AluSx SINE Alu 0 312 1 220 224 0 132 chr10 14432745 14432774 -125883991 + L2 LINE L2 3282 3313 0 2053 115 7 0 chr10 14433444 14433758 -125883007 + AluSx SINE Alu 1 316 0 2200 133 0 0 chr10 14434662 14434962 -125881803 - AluSx SINE Alu -12 300 1 2296 114 0 0 chr10 14436194 14436493 -125880272 - AluSx SINE Alu -13 299 1 2446 88 3 0 chr10 14437390 14437695 -125879070 + AluSx SINE Alu 1 306 -6 2373 116 0 0 chr10 14438396 14438699 -125878066 - AluSx SINE Alu -9 303 1 2114 143 3 3 chr10 14438740 14439048 -125877717 + AluJo SINE Alu 1 308 -4 2066 125 7 0 chr10 14439430 14439727 -125877038 - AluSx SINE Alu -13 299 1 2027 179 0 0 chr10 14440087 14440388 -125876377 - AluSx SINE Alu -11 301 1 191 254 36 0 chr10 14441866 14441921 -125874844 + MIR SINE MIR 78 134 -74 1431 159 19 0 chr10 14442523 14442781 -125873984 + L1MA4 LINE L1 6032 6294 -6 2028 108 21 14 chr10 14443778 14444066 -125872699 - AluSc SINE Alu -7 302 13 2261 76 31 14 chr10 14444822 14445110 -125871655 + AluSx SINE Alu 1 293 -19 216 0 0 0 chr10 14445127 14445151 -125871614 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1309 149 0 21 chr10 14445924 14446159 -125870606 - MER46A DNA MER2_type -6 230 1 1408 142 26 13 chr10 14446221 14446454 -125870311 + MER46A DNA MER2_type 1 236 0 205 370 33 47 chr10 14446508 14446719 -125870046 - L3 LINE CR1 -2 1575 1368 1478 181 140 0 chr10 14447271 14447536 -125869229 + AluJb SINE Alu 1 302 0 982 130 0 22 chr10 14447545 14447729 -125869036 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1959 172 0 22 chr10 14449293 14449612 -125867153 + AluJo SINE Alu 1 312 0 433 232 0 0 chr10 14500109 14500191 -125816574 - AluJ/FLAM SINE Alu -229 83 2 1745 173 25 31 chr10 14500977 14501367 -125815398 + MLT1B LTR MaLR 1 590 -3 1741 150 4 0 chr10 14501394 14501667 -125815098 + AluJb SINE Alu 3 276 -36 1448 287 44 68 chr10 14501842 14502545 -125814220 + MER21B LTR ERV1 24 709 -154 368 282 74 37 chr10 14503031 14503194 -125813571 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14503321 14503417 -125813348 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14503760 14503883 -125812882 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14503996 14504060 -125812705 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14504060 14504361 -125812404 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14504361 14504421 -125812344 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14504644 14504758 -125812007 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14506101 14506203 -125810562 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14506221 14506478 -125810287 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14506497 14506709 -125810056 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14506792 14506858 -125809907 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14508054 14508115 -125808650 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14508891 14508958 -125807807 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14509152 14509202 -125807563 + (TG)n Simple_repeat Simple_repeat 2 51 0 2079 98 10 0 chr10 14510045 14510341 -125806424 - AluSq SINE Alu -14 299 1 243 88 0 0 chr10 14510384 14510418 -125806347 + (A)n Simple_repeat Simple_repeat 1 34 0 2130 113 0 3 chr10 14510612 14510922 -125805843 - AluSx SINE Alu -3 309 1 817 180 0 18 chr10 14511021 14511188 -125805577 - AluJb SINE Alu -13 299 136 449 329 19 6 chr10 14511188 14511346 -125805419 + MIR SINE MIR 101 260 -2 1469 158 64 8 chr10 14511428 14511781 -125804984 - AluJb SINE Alu 0 368 1 1641 137 44 0 chr10 14512744 14513015 -125803750 + AluSx SINE Alu 22 304 -8 526 270 63 31 chr10 14513019 14513241 -125803524 - L1MA9 LINE L1 -76 6236 6008 1730 178 0 6 chr10 14513292 14513606 -125803159 - AluJb SINE Alu 0 312 1 192 117 58 39 chr10 14513607 14513710 -125803055 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 1565 205 18 12 chr10 14514450 14514786 -125801979 + MER58B DNA MER1_type 4 341 0 1142 160 0 31 chr10 14514841 14515066 -125801699 + AluJo SINE Alu 95 312 0 277 246 0 0 chr10 14516610 14516667 -125800098 + L2 LINE L2 3256 3312 -1 1003 190 88 19 chr10 14517279 14517518 -125799247 + AluJb SINE Alu 53 306 0 797 164 7 33 chr10 14517900 14518052 -125798713 - MER3 DNA MER1_type -57 152 5 1847 132 14 10 chr10 14518255 14518550 -125798215 - AluSx SINE Alu -16 296 1 895 128 0 13 chr10 14518551 14518700 -125798065 - L1MA10 LINE L1 -7 6327 6181 330 26 0 0 chr10 14518700 14518739 -125798026 + (TG)n Simple_repeat Simple_repeat 1 39 0 1571 139 60 4 chr10 14518751 14519049 -125797716 + AluJb SINE Alu 1 313 0 314 303 86 46 chr10 14519303 14519478 -125797287 - MIR3 SINE MIR -8 200 19 2373 89 0 6 chr10 14519617 14519932 -125796833 - AluSq SINE Alu 0 313 1 2186 108 0 0 chr10 14521308 14521613 -125795152 + AluSc SINE Alu 1 305 -4 1923 153 0 0 chr10 14521754 14522054 -125794711 - AluSx SINE Alu -12 300 1 204 40 0 0 chr10 14522593 14522618 -125794147 + (TG)n Simple_repeat Simple_repeat 1 25 0 244 258 67 79 chr10 14523221 14523380 -125793385 + MIR SINE MIR 54 210 -52 1460 76 0 10 chr10 14523501 14523699 -125793066 - AluY SINE Alu -8 303 108 345 47 0 0 chr10 14523725 14523768 -125792997 + (TG)n Simple_repeat Simple_repeat 2 44 0 2087 189 59 47 chr10 14523785 14523833 -125792932 + MLT2B1 LTR ERVL 6 52 -468 1902 137 0 3 chr10 14523833 14524125 -125792640 - AluSx SINE Alu -21 291 1 2087 189 59 47 chr10 14524125 14524585 -125792180 + MLT2B1 LTR ERVL 52 520 0 1912 139 3 3 chr10 14524949 14525250 -125791515 - AluJo SINE Alu -2 310 10 1491 153 38 24 chr10 14525601 14525888 -125790877 - AluJo SINE Alu -21 291 1 220 254 0 17 chr10 14526062 14526121 -125790644 - L2 LINE L2 -7 3265 3208 1592 135 50 25 chr10 14526313 14526435 -125790330 + AluSx SINE Alu 1 118 -194 259 44 44 0 chr10 14526435 14526480 -125790285 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1592 135 50 25 chr10 14526480 14526639 -125790126 + AluSx SINE Alu 118 289 -23 203 33 115 0 chr10 14526639 14526700 -125790065 + (TA)n Simple_repeat Simple_repeat 1 68 0 55 0 0 0 chr10 14526700 14526755 -125790010 + AT_rich Low_complexity Low_complexity 1 55 0 3007 172 97 27 chr10 14526818 14527174 -125789591 + LTR51 LTR ERV1 1 331 -340 3038 94 22 0 chr10 14527174 14527620 -125789145 + L1MA2 LINE L1 5849 6304 0 3007 172 97 27 chr10 14527620 14527890 -125788875 + LTR51 LTR ERV1 331 671 0 3143 239 120 73 chr10 14529059 14530622 -125786143 + HAL1 LINE L1 636 2295 -212 1729 161 0 26 chr10 14530622 14530926 -125785839 - AluJb SINE Alu -16 296 1 3143 239 120 73 chr10 14530926 14531149 -125785616 + HAL1 LINE L1 2295 2506 -1 330 379 9 13 chr10 14531452 14531679 -125785086 - MIR SINE MIR -24 238 13 221 327 62 18 chr10 14531756 14531869 -125784896 + MIR SINE MIR 98 215 -47 2184 74 0 14 chr10 14532307 14532603 -125784162 - AluSg SINE Alu -5 305 14 183 246 45 82 chr10 14532728 14532838 -125783927 - MIR SINE MIR -46 216 111 291 28 0 0 chr10 14533114 14533150 -125783615 + (TG)n Simple_repeat Simple_repeat 2 37 0 857 58 0 0 chr10 14533380 14533484 -125783281 + L1PA7 LINE L1 6048 6151 -3 189 0 0 0 chr10 14533520 14533541 -125783224 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1983 138 3 0 chr10 14533552 14533849 -125782916 + AluSg SINE Alu 1 298 -12 226 276 40 13 chr10 14534318 14534394 -125782371 + MIR SINE MIR 154 231 -31 2132 114 0 3 chr10 14534559 14534856 -125781909 + AluSx SINE Alu 1 296 -16 4363 143 17 57 chr10 14535037 14535536 -125781229 + L1MB3 LINE L1 5334 5852 -331 1928 139 13 3 chr10 14535536 14535845 -125780920 + AluJb SINE Alu 1 312 0 4363 143 17 57 chr10 14535845 14535884 -125780881 + L1MB3 LINE L1 5852 5891 -292 2157 133 0 0 chr10 14535884 14536193 -125780572 - AluSx SINE Alu -3 309 1 4363 143 17 57 chr10 14536193 14536479 -125780286 + L1MB3 LINE L1 5891 6125 -58 798 137 0 0 chr10 14536479 14536610 -125780155 + L1PB1 LINE L1 6021 6151 0 4363 143 17 57 chr10 14536610 14536654 -125780111 + L1MB3 LINE L1 6125 6169 -14 216 0 0 0 chr10 14536938 14536962 -125779803 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2166 106 0 0 chr10 14536964 14537257 -125779508 - AluSc SINE Alu -16 293 1 21 36 0 0 chr10 14537301 14537329 -125779436 + AT_rich Low_complexity Low_complexity 1 28 0 1426 182 76 3 chr10 14537892 14538183 -125778582 - AluJb SINE Alu 0 312 1 231 220 180 20 chr10 14538747 14538847 -125777918 + MIR SINE MIR 35 150 -58 2125 96 0 7 chr10 14539221 14539524 -125777241 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr10 14540096 14540136 -125776629 + AT_rich Low_complexity Low_complexity 1 40 0 5645 56 0 0 chr10 14540143 14540821 -125775944 - L1PA5 LINE L1 -7 6147 5470 2182 86 0 3 chr10 14540848 14541138 -125775627 + AluSq SINE Alu 12 300 -13 188 215 31 0 chr10 14541185 14541250 -125775515 + GA-rich Low_complexity Low_complexity 3 69 0 1587 184 11 0 chr10 14541970 14542253 -125774512 - AluJb SINE Alu -6 306 21 371 101 0 101 chr10 14542307 14542376 -125774389 + AluSx SINE Alu 1 62 -241 186 43 0 0 chr10 14542382 14542405 -125774360 + (A)n Simple_repeat Simple_repeat 1 23 0 2037 180 122 4 chr10 14542619 14543086 -125773679 + MER74A LTR ERVL 34 555 -3 288 0 0 0 chr10 14544073 14544105 -125772660 + (CA)n Simple_repeat Simple_repeat 1 32 0 329 0 24 0 chr10 14544284 14544325 -125772440 + (TG)n Simple_repeat Simple_repeat 1 42 0 208 327 67 29 chr10 14545617 14545721 -125771044 - L2 LINE L2 -1839 1475 1368 292 265 29 0 chr10 14546131 14546199 -125770566 + L2 LINE L2 3200 3269 -44 1890 143 31 0 chr10 14547683 14547977 -125768788 - AluSx SINE Alu -9 303 1 1523 140 4 0 chr10 14548664 14548907 -125767858 + AluSx SINE Alu 39 282 -30 459 213 15 22 chr10 14548907 14549043 -125767722 + CT-rich Low_complexity Low_complexity 1 135 0 414 250 0 0 chr10 14549053 14549221 -125767544 + C-rich Low_complexity Low_complexity 1 168 0 1938 110 0 0 chr10 14549726 14549999 -125766766 + AluSx SINE Alu 39 311 -1 339 343 48 0 chr10 14550003 14550149 -125766616 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14552286 14552598 -125764167 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14552910 14552998 -125763767 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14552998 14553100 -125763665 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14553707 14554003 -125762762 + AluSx SINE Alu 1 299 -13 2327 54 3 32 chr10 14554005 14554321 -125762444 + AluY SINE Alu 1 307 -4 1442 213 47 0 chr10 14554321 14554621 -125762144 - L1M4 LINE L1 -379 5799 5486 1806 137 7 7 chr10 14554980 14555279 -125761486 + AluSx SINE Alu 1 299 -13 189 0 0 0 chr10 14555916 14555937 -125760828 + (T)n Simple_repeat Simple_repeat 1 21 0 1973 252 50 23 chr10 14556268 14556791 -125759974 - MLT1H LTR MaLR 0 549 13 428 311 64 14 chr10 14557375 14557597 -125759168 + L1ME2 LINE L1 5478 5717 -445 523 254 81 133 chr10 14557599 14557868 -125758897 - L2 LINE L2 0 3313 3070 667 200 56 22 chr10 14557868 14558048 -125758717 + MER53 DNA DNA 1 186 -3 523 254 81 133 chr10 14558048 14558184 -125758581 - L2 LINE L2 -243 3070 2929 329 278 102 16 chr10 14558218 14558405 -125758360 + L1ME2 LINE L1 5746 5948 -216 2349 72 3 0 chr10 14558635 14558941 -125757824 - AluSq SINE Alu -6 307 1 380 329 63 0 chr10 14559370 14559528 -125757237 + MIR SINE MIR 68 235 -27 192 77 0 0 chr10 14559530 14559556 -125757209 + (TTA)n Simple_repeat Simple_repeat 1 26 0 378 266 186 49 chr10 14560277 14560503 -125756262 - MIR SINE MIR 0 262 6 396 287 78 65 chr10 14561026 14561226 -125755539 + MIR SINE MIR 26 231 -31 201 74 0 0 chr10 14561226 14561253 -125755512 + (TTA)n Simple_repeat Simple_repeat 3 29 0 396 287 78 65 chr10 14561253 14561282 -125755483 + MIR SINE MIR 231 258 -4 2067 103 3 3 chr10 14561804 14562095 -125754670 - AluSx SINE Alu -2 310 20 232 332 67 14 chr10 14562408 14562631 -125754134 - L2 LINE L2 -213 3059 2825 785 172 12 37 chr10 14562931 14563094 -125753671 - AluJo/FRAM SINE Alu -19 293 135 1492 148 109 28 chr10 14563094 14563378 -125753387 - AluJo SINE Alu -5 307 1 921 250 73 82 chr10 14563378 14563802 -125752963 - L2 LINE L2 -10 3303 2884 393 251 27 153 chr10 14563823 14563957 -125752808 + MER5A DNA MER1_type 14 121 -68 2105 119 3 3 chr10 14563957 14564267 -125752498 - AluSx SINE Alu -2 310 1 393 251 27 153 chr10 14564267 14564315 -125752450 + MER5A DNA MER1_type 121 173 -16 330 45 0 0 chr10 14564324 14564368 -125752397 + (TC)n Simple_repeat Simple_repeat 1 44 0 1742 150 27 23 chr10 14564514 14564814 -125751951 + AluJo SINE Alu 6 306 -6 2049 104 7 26 chr10 14565196 14565504 -125751261 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 14565563 14565585 -125751180 + AT_rich Low_complexity Low_complexity 1 22 0 803 251 38 30 chr10 14565658 14565893 -125750872 + MIR SINE MIR 16 252 -10 2134 96 0 0 chr10 14565900 14566210 -125750555 - AluSx SINE Alu 0 310 1 853 168 6 30 chr10 14567145 14567312 -125749453 - FRAM SINE Alu -13 163 1 394 306 75 15 chr10 14567314 14567448 -125749317 + MIR SINE MIR 102 243 -19 302 273 91 27 chr10 14567452 14567562 -125749203 + MIR SINE MIR 143 259 -3 1522 145 87 11 chr10 14567648 14567924 -125748841 - AluJo SINE Alu -15 297 1 2034 121 24 0 chr10 14568437 14568734 -125748031 - AluSx SINE Alu -8 304 1 2038 108 3 3 chr10 14568869 14569165 -125747600 - AluSx SINE Alu -11 301 6 229 143 0 0 chr10 14569742 14569777 -125746988 - MER85 DNA T2_type 0 139 105 299 71 0 0 chr10 14569861 14569903 -125746862 - MER85 DNA T2_type -96 43 2 7122 60 23 0 chr10 14570126 14571206 -125745559 - L1PA8 LINE L1 0 6172 5092 2671 100 8 8 chr10 14571353 14571732 -125745033 + L1PA13 LINE L1 5765 6143 -20 1217 164 14 24 chr10 14571774 14571987 -125744778 - MIR SINE MIR -35 227 17 288 297 57 62 chr10 14572004 14572213 -125744552 - L2 LINE L2 -170 3143 2936 208 261 0 0 chr10 14572252 14572298 -125744467 - L2 LINE L2 -557 2757 2712 280 301 86 73 chr10 14572377 14572911 -125743854 - L2 LINE L2 -431 2883 2343 1959 104 42 0 chr10 14573020 14573307 -125743458 + AluSx SINE Alu 1 299 -13 217 246 0 49 chr10 14573405 14573466 -125743299 + L3b LINE CR1 1306 1363 -220 1305 154 0 0 chr10 14573575 14573776 -125742989 + AluJb SINE Alu 82 282 -30 180 0 0 0 chr10 14573779 14573799 -125742966 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 181 79 0 53 chr10 14574832 14574870 -125741895 + (CGG)n Simple_repeat Simple_repeat 2 37 0 28 68 0 0 chr10 14574931 14574975 -125741790 + GC_rich Low_complexity Low_complexity 1 44 0 194 62 31 0 chr10 14575041 14575073 -125741692 + (CGGGGG)n Simple_repeat Simple_repeat 5 37 0 1923 92 61 10 chr10 14579132 14579425 -125737340 - AluSc SINE Alu -1 308 1 976 191 0 6 chr10 14580070 14580253 -125736512 + FRAM SINE Alu 1 174 -2 201 74 0 0 chr10 14580894 14580921 -125735844 + (GA)n Simple_repeat Simple_repeat 2 28 0 346 226 48 55 chr10 14581390 14581524 -125735241 + MIR SINE MIR 1 139 -69 782 145 0 0 chr10 14581595 14581712 -125735053 - FLAM_C SINE Alu -18 125 9 891 80 0 0 chr10 14582581 14582719 -125734046 + (TG)n Simple_repeat Simple_repeat 2 139 0 2095 121 0 7 chr10 14583308 14583614 -125733151 - AluSx SINE Alu -7 305 2 2045 125 7 0 chr10 14583719 14584024 -125732741 + AluJb SINE Alu 1 307 -5 441 0 0 0 chr10 14584782 14584831 -125731934 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 77 0 0 chr10 14585375 14585401 -125731364 + (TC)n Simple_repeat Simple_repeat 2 27 0 1608 155 4 22 chr10 14585408 14585686 -125731079 - AluJo SINE Alu -39 273 1 857 288 168 37 chr10 14585794 14586784 -125729981 - L2 LINE L2 0 3313 2193 736 180 8 0 chr10 14586877 14587005 -125729760 + FLAM_C SINE Alu 2 130 -3 624 148 13 26 chr10 14587005 14587160 -125729605 + GA-rich Low_complexity Low_complexity 1 153 0 1061 171 0 75 chr10 14587282 14587534 -125729231 - AluJo SINE Alu -6 306 74 806 109 0 8 chr10 14587554 14587673 -125729092 - AluJo SINE Alu -162 150 33 455 250 0 0 chr10 14587683 14587799 -125728966 - L1MA10 LINE L1 -4 6330 6215 372 164 0 0 chr10 14587967 14588034 -125728731 + CT-rich Low_complexity Low_complexity 2 68 0 2195 106 0 0 chr10 14588048 14588351 -125728414 - AluSx SINE Alu -9 303 1 189 0 0 0 chr10 14588578 14588599 -125728166 + (T)n Simple_repeat Simple_repeat 1 21 0 37 62 0 0 chr10 14589967 14590032 -125726733 + AT_rich Low_complexity Low_complexity 1 65 0 518 301 137 5 chr10 14590648 14590867 -125725898 - L3 LINE CR1 -25 1552 1305 441 243 28 0 chr10 14590934 14591041 -125725724 - MER94 DNA DNA -24 110 1 462 328 11 17 chr10 14591102 14591276 -125725489 - L3 LINE CR1 -407 1170 998 259 247 14 14 chr10 14591338 14591411 -125725354 - L3 LINE CR1 -852 725 653 307 267 43 9 chr10 14592028 14592144 -125724621 - L1ME LINE L1 -411 5710 5591 2136 115 3 0 chr10 14592553 14592857 -125723908 - AluSx SINE Alu -7 305 1 1544 167 21 0 chr10 14592981 14593262 -125723503 + AluSq SINE Alu 6 292 -21 1610 152 45 0 chr10 14593610 14593910 -125722855 - AluSq SINE Alu 0 314 3 186 143 0 0 chr10 14594020 14594055 -125722710 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 514 270 23 46 chr10 14594747 14594921 -125721844 - MIR SINE MIR -79 183 14 180 0 0 0 chr10 14596116 14596136 -125720629 + (GGGGA)n Simple_repeat Simple_repeat 3 22 0 187 268 18 104 chr10 14596324 14596488 -125720277 - L2 LINE L2 -328 2985 2836 192 143 0 125 chr10 14597643 14597699 -125719066 - MER5A DNA MER1_type -35 154 106 1652 155 30 17 chr10 14597999 14598295 -125718470 - AluJb SINE Alu -12 300 1 49 18 0 0 chr10 14598555 14598611 -125718154 + AT_rich Low_complexity Low_complexity 1 56 0 851 145 0 0 chr10 14598718 14598842 -125717923 - FLAM_A SINE Alu -8 125 2 528 80 90 17 chr10 14598861 14599154 -125717611 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 197 90 64 39 chr10 14599176 14599254 -125717511 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 1730 178 0 6 chr10 14599255 14599569 -125717196 + AluJb SINE Alu 1 312 0 615 235 63 26 chr10 14599634 14599842 -125716923 + L1MA9 LINE L1 6024 6236 -63 1805 114 44 0 chr10 14599846 14600117 -125716648 - AluSx SINE Alu -8 304 22 1470 158 64 8 chr10 14601080 14601433 -125715332 + AluJb SINE Alu 1 368 0 449 329 19 6 chr10 14601515 14601673 -125715092 - MIR SINE MIR -2 260 101 817 180 0 18 chr10 14601673 14601840 -125714925 + AluJb SINE Alu 136 299 -13 2130 113 0 3 chr10 14601939 14602249 -125714516 + AluSx SINE Alu 1 309 -3 243 88 0 0 chr10 14602443 14602477 -125714288 + (T)n Simple_repeat Simple_repeat 1 34 0 2105 114 3 0 chr10 14602520 14602827 -125713938 + AluSq SINE Alu 1 308 -5 1931 134 0 26 chr10 14603203 14603516 -125713249 - AluSx SINE Alu -7 305 1 195 146 0 0 chr10 14603851 14603892 -125712873 + (A)n Simple_repeat Simple_repeat 1 41 0 407 140 0 0 chr10 14605581 14605638 -125711127 - MLT1B LTR MaLR -332 58 2 836 165 0 0 chr10 14605894 14606027 -125710738 + AluSg/x SINE Alu 158 290 -22 924 238 40 8 chr10 14606359 14606607 -125710158 - MER63 DNA MER1_type -1 1060 805 444 101 72 0 chr10 14606758 14606827 -125709938 - MER63 DNA MER1_type -136 700 1 226 353 25 34 chr10 14606833 14606952 -125709813 - MIR SINE MIR -59 149 32 712 221 36 72 chr10 14607250 14607417 -125709348 + L2 LINE L2 3126 3287 -26 2300 66 3 23 chr10 14607417 14607719 -125709046 - AluSp SINE Alu -17 296 1 712 221 36 72 chr10 14607719 14607746 -125709019 + L2 LINE L2 3287 3313 0 378 298 140 11 chr10 14608158 14608336 -125708429 - L3b LINE CR1 -87 1496 1296 2058 109 0 3 chr10 14608348 14608663 -125708102 - AluSp SINE Alu 0 314 1 263 294 74 74 chr10 14609290 14609711 -125707054 - L1ME4a LINE L1 -59 6062 5642 475 310 77 56 chr10 14610147 14610470 -125706295 + L2 LINE L2 2943 3272 0 396 0 0 0 chr10 14610553 14610597 -125706168 + (CA)n Simple_repeat Simple_repeat 2 45 0 222 274 10 20 chr10 14610606 14610708 -125706057 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 435 19 0 0 chr10 14610749 14610801 -125705964 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 183 100 0 0 chr10 14610822 14610852 -125705913 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 105 0 57 chr10 14612083 14612398 -125704367 + AluSx SINE Alu 1 297 -15 434 304 89 37 chr10 14612593 14612784 -125703981 + L3b LINE CR1 1310 1510 -73 1975 125 13 7 chr10 14612961 14613265 -125703500 - AluSx SINE Alu -6 306 1 1268 181 38 48 chr10 14613270 14613563 -125703202 - AluJo SINE Alu -22 290 1 672 133 68 236 chr10 14613983 14614294 -125702471 + MER33 DNA MER1_type 14 255 -2330 1909 107 70 0 chr10 14614294 14614565 -125702200 + AluSc SINE Alu 3 292 -17 672 133 68 236 chr10 14614565 14614622 -125702143 + MER33 DNA MER1_type 255 320 -4 3191 138 47 21 chr10 14614633 14614895 -125701870 - MER1A DNA MER1_type -2173 527 273 2224 110 0 0 chr10 14614895 14615195 -125701570 - AluSc SINE Alu -9 300 1 3191 138 47 21 chr10 14615195 14615446 -125701319 - MER1A DNA MER1_type -2427 273 1 2071 126 3 0 chr10 14615572 14615882 -125700883 - AluSx SINE Alu -1 311 1 443 313 159 11 chr10 14615899 14616075 -125700690 - MIR SINE MIR -56 206 5 716 120 0 68 chr10 14616592 14616709 -125700056 - AluSg/x SINE Alu -16 294 186 1471 119 5 0 chr10 14616709 14616927 -125699838 - AluSq SINE Alu -94 219 1 204 40 0 0 chr10 14617466 14617491 -125699274 + (TG)n Simple_repeat Simple_repeat 1 25 0 219 250 78 63 chr10 14618095 14618231 -125698534 + MIR SINE MIR 54 191 -62 21 0 0 0 chr10 14618341 14618362 -125698403 + AT_rich Low_complexity Low_complexity 1 21 0 339 343 48 0 chr10 14618364 14618510 -125698255 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14620646 14620958 -125695807 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14621270 14621358 -125695407 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14621358 14621460 -125695305 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14622067 14622363 -125694402 + AluSx SINE Alu 1 299 -13 2128 85 0 29 chr10 14622365 14622672 -125694093 + AluY SINE Alu 1 298 -13 186 294 0 20 chr10 14622745 14622796 -125693969 + MIR SINE MIR 23 72 -136 310 305 30 41 chr10 14622821 14623018 -125693747 + L2 LINE L2 2910 3104 -168 1817 145 3 3 chr10 14623099 14623395 -125693370 - AluSx SINE Alu -15 297 2 245 321 71 57 chr10 14623595 14623735 -125693030 + L2 LINE L2 2923 3064 -208 2221 97 0 13 chr10 14623836 14624146 -125692619 + AluSg SINE Alu 1 306 -4 228 243 0 54 chr10 14624190 14624264 -125692501 + L2 LINE L2 3244 3313 0 2016 118 0 0 chr10 14624905 14625185 -125691580 + AluSc SINE Alu 1 280 -29 1617 153 0 71 chr10 14626404 14626712 -125690053 - AluJo SINE Alu -26 286 1 1808 120 0 8 chr10 14626837 14627104 -125689661 + AluSx SINE Alu 34 298 -14 1593 180 3 38 chr10 14627260 14627577 -125689188 - AluJo SINE Alu -6 306 1 2060 108 0 49 chr10 14628472 14628797 -125687968 - AluSc SINE Alu 0 309 1 881 180 12 18 chr10 14629079 14629246 -125687519 - FRAM SINE Alu 0 166 1 1568 151 10 49 chr10 14629636 14629795 -125686970 - AluJo SINE Alu -20 292 149 1815 148 7 0 chr10 14629795 14630085 -125686680 - AluSx SINE Alu -9 303 12 1568 151 10 49 chr10 14630085 14630229 -125686536 - AluJo SINE Alu -163 149 1 653 219 123 0 chr10 14630572 14630727 -125686038 + MER5B DNA MER1_type 1 174 -4 2155 102 0 0 chr10 14630751 14631046 -125685719 - AluY SINE Alu -16 295 1 877 184 66 5 chr10 14631228 14631440 -125685325 + L1MD3 LINE L1 7756 7980 -15 2112 130 0 0 chr10 14631737 14632038 -125684727 - AluSx SINE Alu -11 301 1 279 79 0 0 chr10 14632910 14632948 -125683817 + (CACG)n Simple_repeat Simple_repeat 2 39 0 278 253 379 0 chr10 14633701 14633796 -125682969 - MER94 DNA DNA -1 133 3 1769 132 30 20 chr10 14635076 14635372 -125681393 - AluSx SINE Alu -13 299 1 1022 94 0 0 chr10 14635388 14635526 -125681239 + AluSg/x SINE Alu 158 295 -15 360 185 12 12 chr10 14635825 14635906 -125680859 - AluSg/x SINE Alu -3 299 219 372 175 0 0 chr10 14636089 14636152 -125680613 + Alu SINE Alu 235 297 -3 2224 88 7 0 chr10 14636448 14636742 -125680023 - AluSc SINE Alu -13 296 1 1072 232 120 4 chr10 14636775 14637025 -125679740 + MLT1A2 LTR MaLR 1 279 -95 260 300 31 46 chr10 14637033 14637163 -125679602 - L2 LINE L2 -5 3308 3181 686 228 65 122 chr10 14637681 14637726 -125679039 - MARNA DNA Mariner -17 569 523 1991 110 21 0 chr10 14637726 14638016 -125678749 + AluSx SINE Alu 1 296 -16 686 228 65 122 chr10 14638016 14638030 -125678735 - MARNA DNA Mariner -63 523 510 1924 148 61 111 chr10 14638030 14638470 -125678295 - MER47B DNA MER2_type 0 418 1 686 228 65 122 chr10 14638470 14638778 -125677987 - MARNA DNA Mariner -76 510 222 1766 142 56 23 chr10 14638872 14639174 -125677591 + AluJo SINE Alu 1 312 0 350 173 0 12 chr10 14639181 14639262 -125677503 + GA-rich Low_complexity Low_complexity 1 80 0 184 278 278 9 chr10 14639640 14639755 -125677010 - MIR SINE MIR -60 202 57 1817 186 62 5 chr10 14639755 14640143 -125676622 + L1MB4 LINE L1 5771 6180 0 633 209 171 37 chr10 14640872 14641059 -125675706 + MLT1I LTR MaLR 198 409 0 2415 101 55 0 chr10 14642035 14642380 -125674385 + THE1B LTR MaLR 1 364 0 364 231 77 0 chr10 14642605 14642683 -125674082 + MIR3 SINE MIR 74 157 -51 1346 182 17 34 chr10 14642737 14643033 -125673732 - AluJo SINE Alu -21 291 1 676 222 7 46 chr10 14643189 14643342 -125673423 + MIR SINE MIR 82 228 -34 2092 99 0 7 chr10 14643407 14643719 -125673046 + AluSx SINE Alu 1 310 0 185 292 42 42 chr10 14643923 14644019 -125672746 + L2 LINE L2 2995 3090 -223 499 214 156 74 chr10 14644116 14644263 -125672502 + MLT1D LTR MaLR 1 135 -332 1612 125 0 74 chr10 14644263 14644560 -125672205 - AluSx SINE Alu -10 302 28 499 214 156 74 chr10 14644560 14644813 -125671952 + MLT1D LTR MaLR 135 467 0 346 273 55 38 chr10 14646151 14646312 -125670453 - MIR SINE MIR -55 207 47 286 238 0 24 chr10 14646596 14646680 -125670085 - L1MC4 LINE L1 -1325 6717 6636 * 936 196 29 0 chr10 14646667 14646871 -125669894 - L1MA8 LINE L1 -27 6264 6055 236 375 48 10 chr10 14646974 14647078 -125669687 + L2 LINE L2 3150 3257 -15 603 214 101 59 chr10 14648676 14648759 -125668006 - MER2 DNA MER2_type 0 345 267 1814 134 9 53 chr10 14648759 14649079 -125667686 + AluSg SINE Alu 1 306 -4 603 214 101 59 chr10 14649079 14649174 -125667591 - MER2 DNA MER2_type -78 267 152 2146 111 0 7 chr10 14649174 14649480 -125667285 + AluSx SINE Alu 1 304 -8 603 214 101 59 chr10 14649480 14649538 -125667227 - MER2 DNA MER2_type -193 152 98 2910 174 26 26 chr10 14649563 14649892 -125666873 - MER44D DNA MER2_type -1892 595 209 1920 117 101 38 chr10 14649892 14650208 -125666557 + MER1B DNA MER1_type 2 337 0 2910 174 26 26 chr10 14650208 14650418 -125666347 - MER44D DNA MER2_type -2277 210 1 421 238 0 0 chr10 14650419 14650503 -125666262 - MER2 DNA MER2_type -261 84 1 230 340 124 0 chr10 14650636 14650733 -125666032 + MIR SINE MIR 148 256 -6 3782 130 51 19 chr10 14652730 14653083 -125663682 - L1PB4 LINE L1 0 6156 5773 2277 97 3 0 chr10 14653083 14653394 -125663371 - AluSp SINE Alu -1 312 1 3782 130 51 19 chr10 14653394 14653671 -125663094 - L1PB4 LINE L1 -383 5773 5506 1545 141 130 11 chr10 14653805 14654074 -125662691 + AluJo SINE Alu 1 301 -1 2037 130 0 0 chr10 14655352 14655652 -125661113 - AluSx SINE Alu -12 300 1 854 211 0 6 chr10 14655860 14656031 -125660734 + FRAM SINE Alu 1 166 -10 247 380 70 22 chr10 14656043 14656272 -125660493 + MIR SINE MIR 17 256 -6 407 237 44 0 chr10 14656990 14657104 -125659661 - MER5B DNA MER1_type -1 177 59 614 191 0 0 chr10 14657110 14657215 -125659550 - AluJo SINE Alu -6 306 202 1109 145 0 0 chr10 14657302 14657468 -125659297 - AluJo SINE Alu -112 200 35 197 270 96 70 chr10 14657612 14657700 -125659065 - L2 LINE L2 -8 3264 3171 2265 103 58 11 chr10 14657700 14658048 -125658717 - THE1B LTR MaLR 0 364 1 197 270 96 70 chr10 14658048 14658074 -125658691 - L2 LINE L2 -101 3171 3147 402 262 206 7 chr10 14658141 14658282 -125658483 + MIR SINE MIR 69 237 -25 351 273 263 25 chr10 14658259 14658457 -125658308 - MIR SINE MIR 0 262 18 * 2014 133 0 19 chr10 14658538 14658854 -125657911 + AluSx SINE Alu 1 310 -2 200 59 29 0 chr10 14658871 14658905 -125657860 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 550 276 74 41 chr10 14659685 14659928 -125656837 + MIR SINE MIR 8 258 -4 3204 116 49 18 chr10 14659970 14660479 -125656286 + MER1A DNA MER1_type 3 527 0 266 196 0 0 chr10 14660492 14660543 -125656222 - L2 LINE L2 0 3313 3263 2069 116 0 0 chr10 14660568 14660860 -125655905 - AluSx SINE Alu -20 292 1 204 253 88 66 chr10 14661047 14661138 -125655627 - MIR SINE MIR -77 131 39 2480 56 0 0 chr10 14661315 14661619 -125655146 - AluY SINE Alu -7 304 1 1494 165 10 28 chr10 14662665 14662956 -125653809 - AluJo SINE Alu -26 286 1 2126 107 0 0 chr10 14663063 14663352 -125653413 - AluSx SINE Alu -20 292 4 1678 172 3 31 chr10 14663549 14663868 -125652897 - AluJo SINE Alu -2 310 1 1764 174 25 29 chr10 14664653 14665043 -125651722 + MLT1B LTR MaLR 1 591 -2 2142 110 3 0 chr10 14665081 14665380 -125651385 + AluSq SINE Alu 13 312 -1 1741 150 4 0 chr10 14665391 14665664 -125651101 + AluJb SINE Alu 3 276 -36 1482 284 44 70 chr10 14665839 14666543 -125650222 + MER21B LTR ERV1 24 709 -154 374 284 74 31 chr10 14667031 14667193 -125649572 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14667320 14667416 -125649349 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14667759 14667882 -125648883 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14667995 14668059 -125648706 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14668059 14668360 -125648405 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14668360 14668420 -125648345 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14668643 14668757 -125648008 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14670100 14670202 -125646563 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14670220 14670477 -125646288 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14670496 14670708 -125646057 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14670791 14670857 -125645908 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14672053 14672114 -125644651 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14672890 14672957 -125643808 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14673151 14673201 -125643564 + (TG)n Simple_repeat Simple_repeat 2 51 0 2169 84 10 0 chr10 14674044 14674340 -125642425 - AluSp SINE Alu -14 299 1 1591 92 5 0 chr10 14674449 14674667 -125642098 + AluSq SINE Alu 1 219 -94 716 120 0 68 chr10 14674667 14674784 -125641981 + AluSg/x SINE Alu 186 294 -16 443 313 159 11 chr10 14675301 14675477 -125641288 + MIR SINE MIR 5 206 -56 2071 126 3 0 chr10 14675494 14675804 -125640961 + AluSx SINE Alu 1 311 -1 3191 138 47 21 chr10 14675929 14676180 -125640585 + MER1A DNA MER1_type 1 244 -2456 2224 110 0 0 chr10 14676180 14676480 -125640285 + AluSc SINE Alu 1 300 -9 3191 138 47 21 chr10 14676480 14676742 -125640023 + MER1A DNA MER1_type 244 527 0 546 173 84 128 chr10 14676753 14676810 -125639955 - Charlie5 DNA MER1_type -4 2581 2523 1909 107 70 0 chr10 14676810 14677081 -125639684 - AluSc SINE Alu -17 292 3 546 173 84 128 chr10 14677081 14677272 -125639493 - Charlie5 DNA MER1_type -62 2523 2344 239 386 0 8 chr10 14677408 14677535 -125639230 + CT-rich Low_complexity Low_complexity 3 128 0 825 166 7 0 chr10 14677811 14677956 -125638809 + AluSp/q SINE Alu 154 299 -14 1712 187 30 16 chr10 14677956 14678320 -125638445 + L1MB8 LINE L1 5797 6165 -13 269 174 0 0 chr10 14678478 14678524 -125638241 - L2 LINE L2 -1 3271 3226 394 235 25 105 chr10 14678626 14678788 -125637977 - L2 LINE L2 -58 3255 3107 331 318 210 0 chr10 14679020 14679196 -125637569 + L3 LINE CR1 367 579 -998 246 269 295 29 chr10 14679356 14679668 -125637097 + L3 LINE CR1 593 987 -590 1099 164 14 5 chr10 14679683 14679891 -125636874 + AluJo SINE Alu 84 293 -19 511 323 62 60 chr10 14679976 14680257 -125636508 + L3 LINE CR1 1067 1351 -226 2441 51 7 0 chr10 14680257 14680553 -125636212 + AluY SINE Alu 1 298 -13 511 323 62 60 chr10 14680553 14680769 -125635996 + L3 LINE CR1 1351 1565 -12 463 264 161 1 chr10 14681344 14681530 -125635235 - MIR SINE MIR -12 250 37 2008 128 0 23 chr10 14682151 14682456 -125634309 - AluSx SINE Alu -14 298 1 247 346 54 15 chr10 14682653 14682783 -125633982 + MIR3 SINE MIR 36 170 -38 648 246 119 25 chr10 14682926 14683162 -125633603 + L2 LINE L2 3056 3313 0 228 67 0 0 chr10 14683288 14683318 -125633447 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2199 99 3 0 chr10 14683400 14683694 -125633071 - AluSx SINE Alu -17 295 1 254 217 12 12 chr10 14684375 14684458 -125632307 + (TTAAA)n Simple_repeat Simple_repeat 3 85 0 1871 134 3 0 chr10 14684522 14684843 -125631922 + AluSx SINE Alu 1 322 0 286 295 0 0 chr10 14685754 14685832 -125630933 - MIR SINE MIR -5 257 180 979 174 61 33 chr10 14685851 14686064 -125630701 - MLT1A1 LTR MaLR 0 374 156 390 129 0 0 chr10 14686069 14686131 -125630634 + (TC)n Simple_repeat Simple_repeat 1 62 0 1657 180 14 0 chr10 14686131 14686425 -125630340 - AluJb SINE Alu -12 300 3 1010 125 6 25 chr10 14686426 14686586 -125630179 - MLT1A1 LTR MaLR -208 157 1 308 257 108 0 chr10 14686609 14686683 -125630082 - MIR SINE MIR -180 82 1 1792 182 24 25 chr10 14686742 14687113 -125629652 + MLT1A2 LTR MaLR 1 546 -3 231 296 67 21 chr10 14687233 14687351 -125629414 - MIR3 SINE MIR -48 160 86 332 311 20 66 chr10 14688456 14688607 -125628158 - L3 LINE CR1 -591 986 843 857 292 132 36 chr10 14689058 14689666 -125627099 + L2 LINE L2 2654 3311 -2 2113 73 0 4 chr10 14689667 14689942 -125626823 + AluSg SINE Alu 29 302 -8 2246 100 0 0 chr10 14690428 14690739 -125626026 - AluY SINE Alu 0 311 1 23 33 0 0 chr10 14690740 14690770 -125625995 + AT_rich Low_complexity Low_complexity 1 30 0 2089 106 13 10 chr10 14691827 14692128 -125624637 + AluSx SINE Alu 1 302 -10 1512 186 0 4 chr10 14692872 14693146 -125623619 - AluJo SINE Alu -8 304 32 815 247 58 25 chr10 14694601 14694844 -125621921 + MIR SINE MIR 2 252 -10 1385 187 0 8 chr10 14695697 14695954 -125620811 - AluJo SINE Alu -21 291 37 342 315 74 19 chr10 14695994 14696156 -125620609 - MIR3 SINE MIR -8 200 30 185 315 0 81 chr10 14696310 14696421 -125620344 + L2 LINE L2 2986 3087 -185 876 158 0 0 chr10 14696511 14696644 -125620121 + AluSq/x SINE Alu 1 133 -180 698 208 86 63 chr10 14697228 14697429 -125619336 + MIR SINE MIR 6 202 -60 10694 92 26 4 chr10 14697934 14699378 -125617387 + Charlie3 DNA MER1_type 543 2017 -693 367 124 38 29 chr10 14699496 14699601 -125617164 + GA-rich Low_complexity Low_complexity 1 106 0 603 116 0 0 chr10 14700122 14700217 -125616548 - L1MA4A LINE L1 -4 6299 6205 2183 105 3 0 chr10 14700549 14700854 -125615911 - AluSp SINE Alu -5 308 3 2027 123 0 16 chr10 14702469 14702779 -125613986 - AluSx SINE Alu -7 305 1 304 249 185 44 chr10 14702947 14703152 -125613613 + LTR33A LTR ERVL 112 345 -178 346 335 71 22 chr10 14704383 14704565 -125612200 - MIR SINE MIR -13 249 59 2300 78 0 0 chr10 14705374 14705668 -125611097 + AluY SINE Alu 1 294 -17 336 280 54 103 chr10 14706301 14706523 -125610242 + MIR SINE MIR 10 223 -39 195 354 73 12 chr10 14707263 14707345 -125609420 - L3b LINE CR1 -10 1573 1487 400 283 72 108 chr10 14707562 14707813 -125608952 - MIR SINE MIR -15 247 6 373 301 178 14 chr10 14708090 14708303 -125608462 - MIR SINE MIR -12 250 3 250 236 14 42 chr10 14709648 14709720 -125607045 - MIR3 SINE MIR -30 178 109 248 290 20 30 chr10 14710769 14710869 -125605896 - MIR SINE MIR -138 124 26 2211 93 3 7 chr10 14710982 14711271 -125605494 + AluSc SINE Alu 1 288 -21 293 278 14 0 chr10 14711885 14711957 -125604808 + L2 LINE L2 3191 3263 -9 206 301 16 73 chr10 14711986 14712109 -125604656 - MIR SINE MIR -135 127 12 211 331 33 16 chr10 14712333 14712454 -125604311 - MIR SINE MIR -136 126 4 2301 97 0 10 chr10 14713163 14713462 -125603303 - AluSx SINE Alu -16 296 1 2457 227 5 34 chr10 14713489 14714049 -125602716 + MER74A LTR ERVL 1 544 -14 222 302 108 14 chr10 14714252 14714391 -125602374 + MIR SINE MIR 56 207 -55 256 295 155 0 chr10 14715844 14715973 -125600792 + MIR3 SINE MIR 58 206 -2 337 306 0 19 chr10 14716007 14716115 -125600650 + MER81 DNA DNA 8 113 -1 27 73 0 0 chr10 14716164 14716219 -125600546 + AT_rich Low_complexity Low_complexity 1 55 0 310 203 61 0 chr10 14716238 14716401 -125600364 + (TA)n Simple_repeat Simple_repeat 1 173 0 180 297 47 0 chr10 14716442 14716506 -125600259 + MIR SINE MIR 196 262 0 1436 216 11 0 chr10 14717194 14717476 -125599289 + AluJb SINE Alu 18 302 -10 1822 132 0 78 chr10 14717490 14717824 -125598941 + AluSx SINE Alu 1 308 -4 264 158 0 0 chr10 14718631 14718688 -125598077 + A-rich Low_complexity Low_complexity 1 57 0 787 169 23 0 chr10 14719856 14719986 -125596779 - FLAM_A SINE Alu 0 133 1 2227 90 0 4 chr10 14720436 14720746 -125596019 - AluSc SINE Alu 0 309 1 312 298 58 0 chr10 14721514 14721618 -125595147 + L2 LINE L2 3155 3264 -8 189 296 0 0 chr10 14723870 14723968 -125592797 + (TG)n Simple_repeat Simple_repeat 2 99 0 232 269 0 0 chr10 14724010 14724062 -125592703 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1881 204 34 0 chr10 14725069 14725422 -125591343 + MLT1A1 LTR MaLR 1 365 0 2226 110 0 22 chr10 14725866 14726185 -125590580 + AluSx SINE Alu 1 312 0 381 315 109 38 chr10 14726399 14726637 -125590128 - MIR SINE MIR 0 262 8 335 114 107 0 chr10 14726876 14727183 -125589582 + (TA)n Simple_repeat Simple_repeat 1 339 0 201 339 57 24 chr10 14727206 14727330 -125589435 + L2 LINE L2 2600 2727 -587 2470 73 0 16 chr10 14727407 14727721 -125589044 - AluY SINE Alu -2 309 1 372 336 14 21 chr10 14727863 14728003 -125588762 + MIR SINE MIR 1 139 -123 1072 235 13 13 chr10 14728455 14728693 -125588072 + MER8 DNA MER2_type 2 239 0 582 171 0 27 chr10 14728799 14728910 -125587855 - FLAM_A SINE Alu -5 137 30 504 0 0 0 chr10 14730740 14730796 -125585969 + (CACAA)n Simple_repeat Simple_repeat 4 59 0 1519 143 0 0 chr10 14731258 14731475 -125585290 + AluSx SINE Alu 1 217 -95 916 277 92 60 chr10 14732175 14732662 -125584103 + MLT1J LTR MaLR 7 509 -2 261 299 0 0 chr10 14733714 14733791 -125582974 + MER116 DNA Mariner 3 79 -1 861 170 0 0 chr10 14734297 14734438 -125582327 + FLAM_C SINE Alu 1 141 -2 1470 221 215 67 chr10 14734544 14735721 -125581044 - L1MC5 LINE L1 -226 7735 6379 4101 107 19 0 chr10 14735804 14736376 -125580389 + L1PA16 LINE L1 5575 6157 -9 1694 279 59 28 chr10 14736601 14737247 -125579518 - L1MC4a LINE L1 -1780 6028 5363 2157 100 3 44 chr10 14738703 14739023 -125577742 + AluSx SINE Alu 1 307 -5 864 131 23 0 chr10 14739031 14739161 -125577604 + AluJb SINE Alu 172 304 -8 315 0 0 0 chr10 14739645 14739680 -125577085 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 886 167 19 0 chr10 14739835 14739991 -125576774 - FRAM SINE Alu -2 174 16 1417 193 49 10 chr10 14739997 14740303 -125576462 - L1MB2 LINE L1 -2 6169 5852 210 71 0 0 chr10 14740555 14740583 -125576182 + (A)n Simple_repeat Simple_repeat 1 28 0 1216 253 0 20 chr10 14741122 14741426 -125575339 - AluSx SINE Alu -2 300 3 272 250 20 30 chr10 14743543 14743643 -125573122 - MIR3 SINE MIR -28 180 82 409 170 0 47 chr10 14743737 14743843 -125572922 + L1M LINE L1 5291 5391 -789 2124 128 0 0 chr10 14744658 14744955 -125571810 - AluSx SINE Alu -15 297 1 2509 161 9 36 chr10 14745325 14745771 -125570994 + Tigger2a DNA MER2_type 1 434 0 192 152 0 0 chr10 14745897 14745930 -125570835 + (TG)n Simple_repeat Simple_repeat 1 33 0 180 176 0 0 chr10 14745941 14745975 -125570790 + CT-rich Low_complexity Low_complexity 1 34 0 415 241 46 0 chr10 14747290 14747398 -125569367 - MER33 DNA MER1_type -211 113 1 2226 157 78 2 chr10 14747628 14748024 -125568741 + MSTB LTR MaLR 1 426 0 596 290 15 25 chr10 14749071 14749271 -125567494 + LTR16B LTR ERVL 5 202 -262 267 263 40 13 chr10 14749253 14749329 -125567436 + LTR16B LTR ERVL 385 462 -2 * 264 229 16 0 chr10 14749377 14749438 -125567327 + L2 LINE L2 3250 3311 -2 193 293 17 0 chr10 14749846 14749904 -125566861 - L2 LINE L2 -1 3312 3254 300 197 28 14 chr10 14750284 14750355 -125566410 + MER5A DNA MER1_type 91 162 -27 231 247 56 135 chr10 14750615 14750649 -125566116 + LTR67 LTR ERVL 387 422 -135 2444 126 22 0 chr10 14750649 14751005 -125565760 - THE1B LTR MaLR 0 364 1 231 247 56 135 chr10 14751005 14751148 -125565617 + LTR67 LTR ERVL 422 550 -7 210 333 95 48 chr10 14752330 14752519 -125564246 + L2 LINE L2 2894 3091 -181 201 195 24 0 chr10 14752580 14752621 -125564144 + L2 LINE L2 3231 3272 0 309 151 288 0 chr10 14752721 14752794 -125563971 + MLT1J1 LTR MaLR 1 94 -352 332 262 8 74 chr10 14752839 14752961 -125563804 + MLT1J2 LTR MaLR 337 450 0 548 282 11 40 chr10 14753165 14753215 -125563550 - MER5A DNA MER1_type -14 175 125 2184 137 0 0 chr10 14753215 14753521 -125563244 + AluSx SINE Alu 1 306 -6 548 282 11 40 chr10 14753521 14753644 -125563121 - MER5A DNA MER1_type -64 125 7 356 301 80 6 chr10 14753734 14753897 -125562868 - MER5A DNA MER1_type -14 175 1 467 281 65 55 chr10 14753904 14754121 -125562644 + MIR SINE MIR 16 234 -28 432 280 53 26 chr10 14754159 14754345 -125562420 + MIR SINE MIR 19 208 -54 1482 111 13 25 chr10 14754477 14754515 -125562250 - L1MA5A LINE L1 -5 6292 6255 2706 120 24 19 chr10 14754515 14754941 -125561824 - MSTA LTR MaLR 0 428 1 1482 111 13 25 chr10 14754941 14755137 -125561628 - L1MA5A LINE L1 -42 6255 6061 339 169 67 22 chr10 14755137 14755226 -125561539 + L1MC5 LINE L1 7833 7925 -36 181 73 24 24 chr10 14755243 14755284 -125561481 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 232 316 0 13 chr10 14756315 14756391 -125560374 + MIR SINE MIR 37 111 -97 368 253 77 71 chr10 14756393 14756523 -125560242 - MIR SINE MIR -33 229 96 2235 110 0 0 chr10 14756523 14756850 -125559915 + AluSx SINE Alu 1 312 0 368 253 77 71 chr10 14756850 14756901 -125559864 - MIR SINE MIR -166 96 47 276 186 0 0 chr10 14757843 14757902 -125558863 + (CA)n Simple_repeat Simple_repeat 1 59 0 375 23 0 0 chr10 14757989 14758033 -125558732 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2240 107 0 3 chr10 14758299 14758598 -125558167 - AluSc SINE Alu -11 298 1 322 310 11 0 chr10 14759088 14759175 -125557590 - L2 LINE L2 -51 3221 3134 429 296 18 12 chr10 14759348 14759517 -125557248 + MLT1L LTR MaLR 410 579 -36 298 167 19 0 chr10 14759691 14759745 -125557020 + MIR SINE MIR 110 164 -98 1810 186 0 6 chr10 14760040 14760532 -125556233 - AluJb SINE Alu 0 312 2 333 0 0 0 chr10 14761501 14761538 -125555227 + (TA)n Simple_repeat Simple_repeat 2 38 0 30 27 0 0 chr10 14762352 14762389 -125554376 + AT_rich Low_complexity Low_complexity 1 37 0 1504 165 57 25 chr10 14762401 14762680 -125554085 - AluJo SINE Alu -24 288 1 1979 124 31 7 chr10 14764142 14764433 -125552332 + AluSx SINE Alu 1 298 -14 930 204 3 0 chr10 14766378 14766674 -125550091 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 746 202 6 0 chr10 14766690 14766868 -125549897 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 3021 107 9 5 chr10 14767291 14767723 -125549042 + MER57B LTR ERV1 1 434 0 4120 91 12 116 chr10 14768301 14769041 -125547724 + MER4A LTR ERV1 2 664 0 365 270 63 0 chr10 14770291 14770402 -125546363 - L2 LINE L2 -1 3271 3154 2362 88 7 3 chr10 14770608 14770915 -125545850 + AluSg SINE Alu 1 308 -2 1725 204 0 6 chr10 14771565 14771879 -125544886 - AluJo SINE Alu 0 312 1 1996 134 0 3 chr10 14772188 14772492 -125544273 - AluSx SINE Alu 0 303 1 241 250 0 0 chr10 14773930 14773982 -125542783 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 253 20 20 chr10 14774741 14774840 -125541925 - MIR3 SINE MIR -28 180 82 4693 149 57 7 chr10 14774942 14775731 -125541034 + L1MB3 LINE L1 5308 6142 -41 1809 154 21 3 chr10 14775731 14776038 -125540727 - AluSx SINE Alu 0 312 1 4693 149 57 7 chr10 14776038 14776080 -125540685 + L1MB3 LINE L1 6142 6180 -3 192 125 0 0 chr10 14776445 14776477 -125540288 + (GGGGA)n Simple_repeat Simple_repeat 4 35 0 181 269 19 0 chr10 14777060 14777112 -125539653 - MIR3 SINE MIR -25 183 131 231 270 54 27 chr10 14777129 14777240 -125539525 - L2 LINE L2 -809 2505 2392 256 305 116 32 chr10 14777314 14777409 -125539356 + MIR3 SINE MIR 4 106 -102 453 285 0 31 chr10 14777782 14777912 -125538853 - MIR SINE MIR -129 133 8 655 221 68 0 chr10 14778168 14778331 -125538434 + MIR SINE MIR 64 237 -25 228 111 0 0 chr10 14778529 14778565 -125538200 + (CACAA)n Simple_repeat Simple_repeat 2 37 0 3002 140 100 2 chr10 14779469 14779949 -125536816 - MER1A DNA MER1_type 0 527 1 532 237 84 28 chr10 14779972 14780187 -125536578 + MIR SINE MIR 28 254 -8 2438 82 3 3 chr10 14780611 14780914 -125535851 + AluSg SINE Alu 1 303 -7 1620 159 3 97 chr10 14781477 14781798 -125534967 - AluJo SINE Alu -10 292 2 2217 129 140 11 chr10 14781980 14782359 -125534406 - MSTA LTR MaLR 0 428 1 2270 200 39 6 chr10 14783271 14783781 -125532984 + L1PA16 LINE L1 5624 6150 -16 241 224 0 0 chr10 14783827 14783876 -125532889 + CT-rich Low_complexity Low_complexity 3 51 0 2458 81 3 3 chr10 14784247 14784556 -125532209 - AluY SINE Alu -2 309 1 1495 168 4 15 chr10 14784724 14784986 -125531779 + AluJo SINE Alu 41 299 -13 425 242 74 37 chr10 14785483 14785673 -125531092 - MER117 DNA MER1_type 0 197 1 569 287 146 29 chr10 14785811 14786229 -125530536 + LTR33A LTR ERVL 23 489 -34 1559 170 18 18 chr10 14787143 14787425 -125529340 + AluJo SINE Alu 9 290 -22 492 272 96 83 chr10 14788076 14788400 -125528365 + L1ME3A LINE L1 5553 5880 -284 1635 184 3 20 chr10 14790462 14790761 -125526004 + AluJo SINE Alu 12 305 -7 264 185 0 0 chr10 14790761 14790815 -125525950 + GA-rich Low_complexity Low_complexity 2 55 0 965 144 0 6 chr10 14790817 14790997 -125525768 + (GGA)n Simple_repeat Simple_repeat 1 179 0 322 152 15 15 chr10 14791359 14791425 -125525340 - MER33 DNA MER1_type -4 320 255 5039 141 26 54 chr10 14791426 14791890 -125524875 + L1MA4A LINE L1 4326 4801 -1375 2046 131 3 3 chr10 14791890 14792181 -125524584 + AluSx SINE Alu 1 291 -21 5039 141 26 54 chr10 14792181 14792856 -125523909 + L1MA4A LINE L1 4801 5433 -743 5112 126 37 20 chr10 14792927 14793078 -125523687 + L1MA4A LINE L1 5433 5580 -723 2289 97 0 7 chr10 14793078 14793378 -125523387 - AluSq SINE Alu -15 298 1 5112 126 37 20 chr10 14793378 14794082 -125522683 + L1MA4A LINE L1 5580 6303 0 895 218 28 23 chr10 14794153 14794369 -125522396 - MER33 DNA MER1_type -106 218 2 228 35 0 0 chr10 14794753 14794782 -125521983 + (T)n Simple_repeat Simple_repeat 1 29 0 197 245 0 41 chr10 14795719 14795768 -125520997 + L2 LINE L2 3224 3270 -2 264 320 68 27 chr10 14796758 14796905 -125519860 + MIR SINE MIR 34 186 -76 1140 110 129 29 chr10 14796908 14797117 -125519648 - MER30 DNA MER1_type 0 230 1 5205 149 22 10 chr10 14797150 14798142 -125518623 + L1PA16 LINE L1 5159 6163 -3 213 205 24 60 chr10 14798191 14798357 -125518408 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 181 325 48 0 chr10 14799017 14799100 -125517665 - L2 LINE L2 0 3272 3186 780 226 73 8 chr10 14799101 14799349 -125517416 + L1MA4 LINE L1 6029 6292 -8 2111 138 0 22 chr10 14799372 14799691 -125517074 + AluSx SINE Alu 1 312 0 276 253 103 0 chr10 14800312 14800399 -125516366 + MER63 DNA MER1_type 1 722 -340 310 285 263 0 chr10 14800804 14800983 -125515782 - MIR SINE MIR 0 262 37 1589 205 61 49 chr10 14801353 14801782 -125514983 + LTR47B LTR ERVL 10 443 0 219 324 69 59 chr10 14801843 14802047 -125514718 - L3b LINE CR1 -195 1388 1183 227 189 22 22 chr10 14802902 14802992 -125513773 + CT-rich Low_complexity Low_complexity 1 90 0 205 138 0 0 chr10 14805682 14805711 -125511054 + (GGA)n Simple_repeat Simple_repeat 2 30 0 277 131 33 0 chr10 14806387 14806448 -125510317 + CT-rich Low_complexity Low_complexity 1 63 0 335 60 20 0 chr10 14806657 14806707 -125510058 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 444 19 0 0 chr10 14806993 14807046 -125509719 + (TG)n Simple_repeat Simple_repeat 1 53 0 1834 153 10 10 chr10 14807649 14807943 -125508822 - AluJo SINE Alu -10 302 9 351 274 9 38 chr10 14808219 14808325 -125508440 - L2 LINE L2 0 3313 3211 2316 96 3 3 chr10 14808593 14808896 -125507869 - AluSc SINE Alu -4 305 3 1635 157 98 11 chr10 14809312 14809599 -125507166 - AluSx SINE Alu 0 312 1 309 298 8 24 chr10 14810103 14810227 -125506538 - MIR SINE MIR -9 253 132 200 333 0 0 chr10 14810462 14810525 -125506240 - L2 LINE L2 0 3313 3251 2062 145 7 7 chr10 14811878 14812188 -125504577 + AluSx SINE Alu 1 310 -2 253 265 159 8 chr10 14812289 14812421 -125504344 - MIR SINE MIR -10 252 101 356 200 35 0 chr10 14813731 14813816 -125502949 - L1MA7 LINE L1 0 6291 6204 1920 159 0 14 chr10 14813823 14814119 -125502646 - AluJb SINE Alu -18 294 3 1469 192 4 29 chr10 14814388 14814664 -125502101 + AluJo SINE Alu 5 273 -39 1846 81 95 32 chr10 14816247 14816530 -125500235 - AluSg SINE Alu -1 309 9 26 0 0 0 chr10 14816929 14816955 -125499810 + AT_rich Low_complexity Low_complexity 1 26 0 183 80 0 0 chr10 14818264 14818289 -125498476 + (A)n Simple_repeat Simple_repeat 1 25 0 263 230 30 30 chr10 14818393 14818493 -125498272 + MER72 LTR ERV1 377 476 -246 394 196 155 21 chr10 14818518 14818716 -125498049 + LTR45B LTR ERV1 264 525 0 1446 207 21 17 chr10 14818974 14819264 -125497501 + AluJo SINE Alu 11 301 -11 261 139 0 0 chr10 14819264 14819307 -125497458 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 281 260 140 0 chr10 14819402 14819502 -125497263 - MIR3 SINE MIR -10 198 85 772 186 0 7 chr10 14819715 14819855 -125496910 + AluJb SINE Alu 92 230 -82 1503 194 0 4 chr10 14820784 14821052 -125495713 + AluJb SINE Alu 36 302 -10 2368 95 0 0 chr10 14821418 14821714 -125495051 + AluSq SINE Alu 1 296 -17 182 275 50 25 chr10 14821816 14821896 -125494869 - MIR SINE MIR -93 115 34 189 244 0 0 chr10 14822251 14822292 -125494473 - MIR SINE MIR -110 152 112 473 162 49 162 chr10 14822435 14822490 -125494275 - LTR45B LTR ERV1 -15 474 414 1469 175 13 58 chr10 14822490 14822799 -125493966 - AluJo SINE Alu -4 308 14 473 162 49 162 chr10 14822799 14822976 -125493789 - LTR45B LTR ERV1 -75 414 304 180 0 0 0 chr10 14823932 14823952 -125492813 + (TC)n Simple_repeat Simple_repeat 1 20 0 237 146 0 0 chr10 14825572 14825620 -125491145 + (CA)n Simple_repeat Simple_repeat 1 48 0 31 44 0 0 chr10 14825810 14825855 -125490910 + AT_rich Low_complexity Low_complexity 1 45 0 205 273 0 0 chr10 14826334 14826389 -125490376 + (TTCA)n Simple_repeat Simple_repeat 4 58 0 2388 56 0 3 chr10 14826456 14826762 -125490003 + AluY SINE Alu 1 311 0 231 188 20 59 chr10 14826904 14827005 -125489760 + (TTATA)n Simple_repeat Simple_repeat 2 98 0 309 155 0 0 chr10 14828258 14828316 -125488449 + (CA)n Simple_repeat Simple_repeat 1 58 0 1934 115 87 0 chr10 14829501 14829787 -125486978 - AluSq SINE Alu -2 311 1 584 261 102 28 chr10 14830904 14831119 -125485646 + MIR SINE MIR 32 262 0 414 0 0 0 chr10 14831409 14831455 -125485310 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 664 138 0 43 chr10 14831458 14831574 -125485191 - AluSg/x SINE Alu -26 283 173 1764 130 0 0 chr10 14831574 14831813 -125484952 - AluSq SINE Alu -71 242 4 27 29 0 0 chr10 14831984 14832018 -125484747 + AT_rich Low_complexity Low_complexity 1 34 0 601 123 29 36 chr10 14832018 14832156 -125484609 - L1MA7 LINE L1 -2 6289 6153 951 129 17 51 chr10 14832156 14832334 -125484431 - AluJo SINE Alu -17 295 124 1576 107 4 25 chr10 14832422 14832664 -125484101 - AluSx SINE Alu -16 296 60 1351 231 207 17 chr10 14832864 14833521 -125483244 + LTR50 LTR ERVL 14 795 0 2239 90 0 45 chr10 14833978 14834288 -125482477 + AluSg SINE Alu 1 296 -14 2273 81 3 0 chr10 14834517 14834835 -125481930 - AluSx SINE Alu 0 319 1 1910 157 3 3 chr10 14834913 14835207 -125481558 - AluJb SINE Alu -18 294 1 1736 160 20 20 chr10 14836276 14836570 -125480195 + AluJb SINE Alu 1 294 -18 234 91 0 0 chr10 14837178 14837211 -125479554 + (T)n Simple_repeat Simple_repeat 1 33 0 696 217 6 12 chr10 14837325 14837486 -125479279 - MER3 DNA MER1_type -43 166 7 2226 125 0 0 chr10 14837659 14837964 -125478801 + AluSx SINE Alu 1 305 -7 2044 130 0 37 chr10 14838650 14838974 -125477791 + AluSx SINE Alu 1 312 0 561 287 81 60 chr10 14839018 14839366 -125477399 + L1ME4a LINE L1 5524 5878 -243 1469 77 10 0 chr10 14839373 14839567 -125477198 - Charlie3 DNA MER1_type -4 2706 2511 196 287 49 63 chr10 14839664 14839807 -125476958 + MIR SINE MIR 117 257 -5 297 0 0 0 chr10 14839822 14839855 -125476910 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 245 109 54 chr10 14839865 14840012 -125476753 + L1ME4a LINE L1 5964 6118 -3 1625 182 17 7 chr10 14840054 14840345 -125476420 + AluJo SINE Alu 1 294 -18 281 171 0 43 chr10 14841253 14841323 -125475442 - MLT1C LTR MaLR -202 265 199 283 186 35 115 chr10 14841491 14841604 -125475161 + MLT1B LTR MaLR 76 179 -288 2193 59 96 0 chr10 14841605 14841875 -125474890 + AluY SINE Alu 5 300 -11 1001 170 0 13 chr10 14841875 14842034 -125474731 + AluJb SINE Alu 135 291 -21 638 195 17 126 chr10 14842044 14842255 -125474510 + MLT1B LTR MaLR 185 371 -19 1616 179 135 3 chr10 14842255 14842574 -125474191 + MLT1A1 LTR MaLR 1 361 -4 638 195 17 126 chr10 14842574 14842593 -125474172 + MLT1B LTR MaLR 371 390 0 256 250 120 11 chr10 14842702 14842794 -125473971 - L2 LINE L2 -18 3254 3153 1992 138 0 3 chr10 14842851 14843164 -125473601 - AluSg SINE Alu 0 312 1 555 314 54 8 chr10 14843320 14843562 -125473203 - MIR SINE MIR -2 260 8 1752 173 0 24 chr10 14845090 14845413 -125471352 + AluJo SINE Alu 1 316 0 556 292 109 0 chr10 14845441 14845633 -125471132 - MIR SINE MIR -3 259 47 1447 137 48 36 chr10 14845852 14846100 -125470665 + THE1B LTR MaLR 1 251 -113 * 1674 122 4 4 chr10 14846095 14846341 -125470424 + THE1B LTR MaLR 119 364 0 234 254 0 0 chr10 14846359 14846422 -125470343 - MER91 DNA MER1_type -77 63 1 474 325 76 0 chr10 14846484 14846641 -125470124 + MIR3 SINE MIR 29 197 -11 820 152 23 8 chr10 14848521 14848653 -125468112 + AluSq/x SINE Alu 2 135 -178 2010 142 30 57 chr10 14849381 14849747 -125467018 + THE1B LTR MaLR 1 356 -8 281 384 29 0 chr10 14849782 14849920 -125466845 + MER91A DNA MER1_type 47 188 -8 2148 128 3 0 chr10 14849964 14850261 -125466504 - AluSx SINE Alu -14 298 1 557 129 20 30 chr10 14850704 14850805 -125465960 + AluSq SINE Alu 2 101 -212 428 17 83 33 chr10 14850805 14850865 -125465900 - THE1B LTR MaLR -301 63 1 1819 88 0 0 chr10 14850890 14851117 -125465648 + AluSq SINE Alu 87 313 0 193 154 0 26 chr10 14851529 14851568 -125465197 - L2 LINE L2 -13 3300 3263 477 34 0 0 chr10 14852912 14852971 -125463794 + (TG)n Simple_repeat Simple_repeat 2 60 0 1702 147 19 8 chr10 14853718 14853983 -125462782 - AluJo SINE Alu -39 273 6 1882 126 4 22 chr10 14854931 14855208 -125461557 + AluSx SINE Alu 1 272 -40 243 61 0 0 chr10 14855222 14855255 -125461510 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1950 164 3 0 chr10 14855591 14855895 -125460870 + AluJb SINE Alu 1 305 -7 222 37 0 0 chr10 14855895 14855922 -125460843 + (GA)n Simple_repeat Simple_repeat 2 28 0 728 77 77 62 chr10 14858240 14858370 -125458395 - L1PA8 LINE L1 -1 6171 6040 243 305 86 8 chr10 14858388 14858516 -125458249 + L2 LINE L2 2218 2355 -959 808 196 10 95 chr10 14858560 14858845 -125457920 - MLT1B LTR MaLR -31 359 1 194 310 51 35 chr10 14859108 14859305 -125457460 + L2 LINE L2 2772 2969 -303 212 239 22 0 chr10 14859326 14859372 -125457393 + CT-rich Low_complexity Low_complexity 2 48 0 2312 125 0 0 chr10 14859372 14859683 -125457082 - AluSx SINE Alu -1 311 1 248 250 53 83 chr10 14859833 14859965 -125456800 + L2 LINE L2 3184 3311 -2 2213 113 7 0 chr10 14860011 14860302 -125456463 - AluSc SINE Alu -15 294 2 425 293 9 0 chr10 14860454 14860570 -125456195 - MER94 DNA DNA -4 130 14 216 122 0 0 chr10 14861209 14861250 -125455515 + (T)n Simple_repeat Simple_repeat 1 41 0 1245 188 21 25 chr10 14861630 14861869 -125454896 - AluJo SINE Alu -73 239 2 491 343 64 4 chr10 14862416 14862652 -125454113 + MIR SINE MIR 13 262 0 6124 199 13 4 chr10 14862753 14863478 -125453287 - L1PA15 LINE L1 0 6165 5448 2361 80 0 13 chr10 14863478 14863777 -125452988 - AluY SINE Alu -16 295 1 6124 199 13 4 chr10 14863777 14865084 -125451681 - L1PA15 LINE L1 -717 5448 4121 390 236 242 13 chr10 14865098 14865315 -125451450 + MIR SINE MIR 3 262 0 2048 117 3 20 chr10 14865419 14865718 -125451047 + AluSx SINE Alu 1 294 -18 2334 62 3 0 chr10 14867290 14867580 -125449185 - AluY SINE Alu -20 291 1 243 0 0 0 chr10 14869128 14869155 -125447610 + (A)n Simple_repeat Simple_repeat 1 27 0 443 122 0 27 chr10 14869169 14869243 -125447522 - AluJo SINE Alu -178 134 63 2148 130 0 3 chr10 14869457 14869764 -125447001 - AluSx SINE Alu -6 306 1 437 299 136 27 chr10 14870272 14870493 -125446272 - MIR SINE MIR -8 254 10 3722 80 0 0 chr10 14870649 14871112 -125445653 - L1PA8 LINE L1 0 6172 5710 2381 59 0 0 chr10 14871479 14871793 -125444972 + AluY SINE Alu 1 314 0 1076 239 8 8 chr10 14874910 14875161 -125441604 + L1MB3 LINE L1 5534 5784 -387 258 136 0 0 chr10 14875168 14875212 -125441553 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 2131 124 46 66 chr10 14875212 14875322 -125441443 + L1MB3 LINE L1 5782 5893 -290 1883 137 105 37 chr10 14875322 14875673 -125441092 + THE1C LTR MaLR 1 375 0 2131 124 46 66 chr10 14875673 14875972 -125440793 + L1MB3 LINE L1 5893 6183 0 369 245 46 46 chr10 14876388 14876539 -125440226 + MLT1I LTR MaLR 16 166 -243 264 305 195 6 chr10 14876771 14876945 -125439820 - MIR SINE MIR -36 226 20 220 313 187 11 chr10 14877364 14877546 -125439219 + MIR SINE MIR 1 214 -48 2352 134 45 18 chr10 14877626 14878006 -125438759 + MLT1B LTR MaLR 1 390 0 462 296 0 0 chr10 14878508 14878763 -125438002 + (CA)n Simple_repeat Simple_repeat 1 255 0 345 117 0 0 chr10 14879628 14879688 -125437077 + (TC)n Simple_repeat Simple_repeat 2 61 0 248 316 42 11 chr10 14880235 14880330 -125436435 - MIR SINE MIR -6 256 159 253 231 0 177 chr10 14881157 14881202 -125435563 - MIR SINE MIR -67 141 90 2214 123 0 3 chr10 14881202 14881510 -125435255 + AluSx SINE Alu 1 307 -5 253 231 0 177 chr10 14881510 14881630 -125435135 - MIR SINE MIR -118 90 2 468 285 47 28 chr10 14881717 14881931 -125434834 + L1ME LINE L1 5597 5814 -307 2009 103 35 14 chr10 14882082 14882394 -125434371 - AluSq SINE Alu 0 313 1 1380 213 86 98 chr10 14883208 14883757 -125433008 + MLT1F LTR MaLR 1 542 0 491 243 57 110 chr10 14883829 14884092 -125432673 + MIR SINE MIR 13 261 -1 3144 216 118 29 chr10 14884173 14885060 -125431705 - L1MC4 LINE L1 -1 8041 7059 227 79 26 0 chr10 14885060 14885098 -125431667 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 3144 216 118 29 chr10 14885098 14885178 -125431587 - L1MC4 LINE L1 -983 7059 6988 370 0 0 0 chr10 14886885 14886928 -125429837 + L1PA3 LINE L1 6110 6152 -3 2034 142 0 10 chr10 14887855 14888157 -125428608 + AluSx SINE Alu 2 300 -12 375 281 54 37 chr10 14888189 14888538 -125428227 + L1ME1 LINE L1 4258 4612 -1534 28 0 0 0 chr10 14888547 14888575 -125428190 + AT_rich Low_complexity Low_complexity 1 28 0 825 177 0 41 chr10 14888835 14888982 -125427783 + FLAM_C SINE Alu 2 142 -1 2012 138 0 7 chr10 14889180 14889477 -125427288 + AluSx SINE Alu 1 295 -17 1739 220 68 20 chr10 14889633 14890074 -125426691 + MLT1C LTR MaLR 6 467 0 3091 230 73 32 chr10 14890079 14891303 -125425462 + L1ME1 LINE L1 4882 6161 -5 23 54 0 0 chr10 14891492 14891529 -125425236 + AT_rich Low_complexity Low_complexity 1 37 0 353 225 172 33 chr10 14892990 14893141 -125423624 + MIR3 SINE MIR 5 176 -32 393 351 27 20 chr10 14893797 14893945 -125422820 + MIR3 SINE MIR 42 190 -18 360 0 0 0 chr10 14894075 14894115 -125422650 + (CA)n Simple_repeat Simple_repeat 2 41 0 248 299 0 11 chr10 14894115 14894202 -125422563 + CT-rich Low_complexity Low_complexity 4 89 0 291 304 80 32 chr10 14894387 14894512 -125422253 + MIR SINE MIR 58 188 -74 346 248 66 8 chr10 14896228 14896349 -125420416 - MIR SINE MIR -48 214 87 201 343 27 0 chr10 14896617 14896690 -125420075 - L2 LINE L2 0 3272 3198 2236 85 0 7 chr10 14896912 14897205 -125419560 - AluSg SINE Alu -19 291 1 921 150 26 107 chr10 14898230 14898463 -125418302 - MER20 DNA MER1_type -5 214 1 303 28 0 0 chr10 14898624 14898660 -125418105 + (TG)n Simple_repeat Simple_repeat 1 36 0 352 289 106 59 chr10 14899461 14899655 -125417110 - MIR SINE MIR -55 207 1 1539 196 44 69 chr10 14901416 14901848 -125414917 - MLT1D LTR MaLR 0 505 85 246 178 0 0 chr10 14901848 14901893 -125414872 + MLT2B3 LTR ERVL 1 45 -509 1800 201 5 62 chr10 14902074 14902463 -125414302 + MLT2B3 LTR ERVL 182 548 -6 609 157 0 0 chr10 14902467 14902556 -125414209 - MLT1D LTR MaLR -415 90 2 2834 194 55 19 chr10 14902785 14902997 -125413768 - MER6A DNA MER2_type -260 605 402 2144 176 106 3 chr10 14902997 14903383 -125413382 - MSTB LTR MaLR 0 426 1 2834 194 55 19 chr10 14903383 14903754 -125413011 - MER6A DNA MER2_type -463 402 1 43 20 0 0 chr10 14904077 14904127 -125412638 + AT_rich Low_complexity Low_complexity 1 50 0 305 305 40 20 chr10 14904332 14904483 -125412282 - MLT1I LTR MaLR -188 221 68 477 66 16 0 chr10 14904724 14904785 -125411980 - MSTB LTR MaLR -49 377 316 1543 201 39 7 chr10 14905056 14905182 -125411583 + AluSx SINE Alu 1 122 -190 468 51 0 0 chr10 14905182 14905241 -125411524 + (CA)n Simple_repeat Simple_repeat 2 60 0 1543 201 39 7 chr10 14905241 14905397 -125411368 + AluSx SINE Alu 122 292 -20 277 196 36 0 chr10 14905974 14906030 -125410735 - L2 LINE L2 0 3272 3215 196 188 203 47 chr10 14906482 14906546 -125410219 - MIR SINE MIR -70 138 65 1789 185 3 0 chr10 14907887 14908189 -125408576 + AluJo SINE Alu 1 303 -9 252 345 83 7 chr10 14908198 14908343 -125408422 + MIR3 SINE MIR 37 192 -16 1668 181 17 0 chr10 14909004 14909292 -125407473 - AluJb SINE Alu -19 293 1 1870 186 42 31 chr10 14909400 14909760 -125407005 + MLT1A1 LTR MaLR 2 365 0 2034 127 6 38 chr10 14911313 14911629 -125405136 - AluSx SINE Alu -6 306 1 200 327 125 0 chr10 14911871 14911975 -125404790 - MIR SINE MIR -62 200 84 314 244 200 0 chr10 14912044 14912159 -125404606 - MIR3 SINE MIR -61 147 10 732 186 0 0 chr10 14912446 14912559 -125404206 - FLAM_A SINE Alu -12 130 18 1820 153 26 110 chr10 14912962 14913114 -125403651 + MLT1B LTR MaLR 1 164 -226 2402 103 3 0 chr10 14913114 14913426 -125403339 - AluSp SINE Alu 0 313 1 1820 153 26 110 chr10 14913426 14913699 -125403066 + MLT1B LTR MaLR 164 390 0 1130 133 0 0 chr10 14913701 14913874 -125402891 - L1MB3 LINE L1 -10 6173 6001 2028 154 31 34 chr10 14914039 14914396 -125402369 - THE1B LTR MaLR -8 356 1 180 279 38 51 chr10 14915864 14915943 -125400822 + MIR SINE MIR 38 115 -147 499 327 22 22 chr10 14915958 14916184 -125400581 - MIR SINE MIR 0 262 37 250 286 95 16 chr10 14916198 14916324 -125400441 + MIR SINE MIR 119 254 -8 2135 115 0 16 chr10 14916500 14916804 -125399961 + AluY SINE Alu 1 299 -12 368 262 0 29 chr10 14916962 14917065 -125399700 + L2 LINE L2 2985 3084 -188 319 296 180 5 chr10 14917679 14917868 -125398897 + MIR SINE MIR 31 252 -10 221 341 65 8 chr10 14919443 14919566 -125397199 + L2 LINE L2 3184 3313 0 30 0 0 0 chr10 14920704 14920734 -125396031 + AT_rich Low_complexity Low_complexity 1 30 0 5168 142 15 35 chr10 14920734 14921726 -125395039 - L1MB1 LINE L1 0 6168 5194 * 5448 199 46 11 chr10 14921725 14922913 -125393852 + L1MB1 LINE L1 3960 5189 -957 415 212 80 29 chr10 14922924 14923061 -125393704 + MIR SINE MIR 119 262 0 1236 283 169 27 chr10 14923574 14924653 -125392112 + L1ME3 LINE L1 3768 4693 -1469 2322 96 0 3 chr10 14924653 14924945 -125391820 + AluY SINE Alu 1 291 -20 1236 283 169 27 chr10 14924945 14925221 -125391544 + L1ME3 LINE L1 4693 4929 -1233 2262 160 79 5 chr10 14925221 14925590 -125391175 + MSTD LTR MaLR 1 396 0 1236 283 169 27 chr10 14925590 14926130 -125390635 + L1ME3 LINE L1 4929 5951 -211 503 267 62 11 chr10 14929023 14929199 -125387566 - MER117 DNA MER1_type -10 187 3 181 255 20 71 chr10 14929944 14930042 -125386723 - L2 LINE L2 -706 2608 2516 * 236 330 198 0 chr10 14930024 14930130 -125386635 + MIR3 SINE MIR 34 160 -48 1068 214 35 0 chr10 14930141 14930342 -125386423 + MER58A DNA MER1_type 17 224 0 562 266 155 29 chr10 14930447 14930725 -125386040 - Charlie8 DNA MER1_type -2008 409 97 292 312 28 0 chr10 14931130 14931239 -125385526 + MER81 DNA DNA 2 113 -1 245 317 130 8 chr10 14931580 14931703 -125385062 - MIR SINE MIR -67 195 58 250 386 0 0 chr10 14931883 14931997 -125384768 + L3b LINE CR1 1120 1233 -350 224 208 292 0 chr10 14932599 14932671 -125384094 + MIR SINE MIR 55 147 -61 1601 265 77 42 chr10 14932956 14933517 -125383248 + MER77 LTR ERV1 49 598 -7 774 268 127 0 chr10 14934556 14934761 -125382004 + MIR SINE MIR 6 236 -26 339 313 57 57 chr10 14935197 14935373 -125381392 + MER5B DNA MER1_type 1 176 -2 582 211 176 0 chr10 14935393 14935535 -125381230 - MER5A DNA MER1_type -3 186 20 3366 160 5 55 chr10 14935887 14936536 -125380229 - L1MB3 LINE L1 -174 6009 5394 1191 240 59 52 chr10 14936825 14937233 -125379532 + LTR16C LTR ERVL 81 491 0 3478 107 18 10 chr10 14937779 14938274 -125378491 + L1PA11 LINE L1 5659 6157 -17 21 0 0 0 chr10 14940526 14940547 -125376218 + AT_rich Low_complexity Low_complexity 1 21 0 1591 207 0 0 chr10 14941304 14941584 -125375181 + AluJb SINE Alu 1 280 -32 191 0 24 71 chr10 14941587 14941629 -125375136 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 266 336 19 19 chr10 14941639 14941746 -125375019 + MER5A DNA MER1_type 83 189 0 2209 174 36 128 chr10 14942468 14943142 -125373623 + LTR9 LTR ERV1 1 612 0 797 269 26 19 chr10 14944558 14944826 -125371939 + L1MC4a LINE L1 5559 5828 -1980 1156 175 0 10 chr10 14944828 14945034 -125371731 + AluJb SINE Alu 105 308 -4 1728 179 0 32 chr10 14945215 14945528 -125371237 + AluJo SINE Alu 3 305 -7 513 337 20 0 chr10 14946092 14946288 -125370477 - LTR67 LTR ERVL 0 557 358 733 170 50 66 chr10 14946602 14946784 -125369981 + MLT1L LTR MaLR 216 394 -221 450 317 149 43 chr10 14946871 14947594 -125369171 + L2 LINE L2 1685 2484 -830 245 339 18 37 chr10 14947645 14947754 -125369011 + L2 LINE L2 2652 2758 -556 469 310 35 0 chr10 14947984 14948100 -125368665 - L2 LINE L2 -2 3270 3151 1158 219 180 27 chr10 14948324 14948657 -125368108 + MSTD LTR MaLR 1 384 -12 198 103 0 0 chr10 14948658 14948687 -125368078 + (GAA)n Simple_repeat Simple_repeat 2 30 0 285 296 138 26 chr10 14948847 14949036 -125367729 + MLT1K LTR MaLR 335 544 -44 202 344 103 49 chr10 14949102 14949509 -125367256 + L2 LINE L2 2538 2966 -348 269 247 31 117 chr10 14949596 14949758 -125367007 + L2 LINE L2 3122 3269 -44 329 234 0 9 chr10 14949789 14949896 -125366869 + GA-rich Low_complexity Low_complexity 4 109 0 1516 288 68 23 chr10 14950919 14951481 -125365284 + MLT1G LTR MaLR 1 587 -3 221 0 35 0 chr10 14951483 14951512 -125365253 + (TC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr10 14951511 14951531 -125365234 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 181 348 67 34 chr10 14951876 14952293 -125364472 + L2 LINE L2 2230 2660 -654 456 332 70 41 chr10 14953010 14953353 -125363412 + L2 LINE L2 2960 3312 -1 193 169 34 0 chr10 14953460 14953519 -125363246 + (TA)n Simple_repeat Simple_repeat 2 62 0 541 336 91 48 chr10 14953654 14953911 -125362854 - L2 LINE L2 -447 2867 2623 2475 121 114 8 chr10 14953911 14954298 -125362467 + MSTA LTR MaLR 1 428 0 541 336 91 48 chr10 14954298 14954692 -125362073 - L2 LINE L2 -691 2623 2188 268 320 55 8 chr10 14955424 14955552 -125361213 - MIR SINE MIR -7 255 122 580 256 88 57 chr10 14956043 14956270 -125360495 + MLT1K LTR MaLR 324 557 -31 2106 104 0 17 chr10 14956799 14957108 -125359657 - AluSx SINE Alu 0 304 1 246 344 45 19 chr10 14957112 14957266 -125359499 + MIR SINE MIR 60 216 -46 196 200 0 0 chr10 14957861 14957896 -125358869 + L2 LINE L2 3268 3302 -11 21 57 0 0 chr10 14958162 14958197 -125358568 + AT_rich Low_complexity Low_complexity 1 35 0 204 333 33 67 chr10 14958506 14958656 -125358109 + MIR3 SINE MIR 18 162 -46 265 291 86 26 chr10 14959580 14959731 -125357034 - MIR3 SINE MIR -22 186 27 333 68 0 0 chr10 14960779 14960823 -125355942 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 85 0 51 chr10 14963088 14963147 -125353618 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 1399 201 0 82 chr10 14963682 14964010 -125352755 + AluJo SINE Alu 1 301 -11 194 293 17 0 chr10 14964016 14964074 -125352691 + L2 LINE L2 3254 3312 -1 1765 148 12 70 chr10 14964074 14964404 -125352361 + AluSx SINE Alu 1 311 -1 1919 152 0 13 chr10 14966759 14967061 -125349704 + AluSx SINE Alu 1 298 -14 2755 259 24 53 chr10 14967840 14968772 -125347993 + L1ME1 LINE L1 37 941 -5455 2849 257 62 33 chr10 14968824 14970208 -125346557 + L1ME1 LINE L1 1145 4446 -1769 1446 246 81 21 chr10 14970200 14970679 -125346086 + L1MB8 LINE L1 5662 6169 -9 * 1025 212 62 78 chr10 14970688 14971046 -125345719 + L1ME1 LINE L1 5877 6228 -7 2410 97 7 0 chr10 14971130 14971472 -125345293 - AluSx SINE Alu 0 344 1 2129 73 0 77 chr10 14971854 14972167 -125344598 - AluSg SINE Alu -21 289 1 210 71 0 0 chr10 14973243 14973271 -125343494 + (A)n Simple_repeat Simple_repeat 1 28 0 1951 165 7 0 chr10 14973810 14974107 -125342658 - AluSx SINE Alu -12 300 2 984 281 169 23 chr10 14975489 14976256 -125340509 + L2 LINE L2 2420 3300 -13 26 30 0 0 chr10 14977024 14977057 -125339708 + AT_rich Low_complexity Low_complexity 1 33 0 3049 156 46 13 chr10 14977362 14977906 -125338859 + L1MC3 LINE L1 7223 7784 -1 2560 65 7 0 chr10 14977918 14978227 -125338538 + AluY SINE Alu 1 311 0 2356 108 73 14 chr10 14979177 14979521 -125337244 - THE1B LTR MaLR 0 364 1 1544 183 30 0 chr10 14979701 14979969 -125336796 + AluJo SINE Alu 11 286 -26 361 209 0 36 chr10 14979970 14980080 -125336685 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 1979 152 108 33 chr10 14982002 14982505 -125334260 - MLT2A2 LTR ERVL 0 554 1 1197 168 124 51 chr10 14982778 14983052 -125333713 + MLT2B2 LTR ERVL 1 294 -221 920 253 23 19 chr10 14983054 14983311 -125333454 - LTR9 LTR ERV1 0 612 355 905 112 0 16 chr10 14983523 14983648 -125333117 + FRAM SINE Alu 34 156 -20 2251 84 26 23 chr10 14984070 14984379 -125332386 + AluY SINE Alu 1 310 -1 445 221 103 29 chr10 14986574 14986710 -125330055 + LTR33 LTR ERVL 3 148 -373 574 285 0 0 chr10 14986968 14987098 -125329667 + MER31B-int LTR ERV1 13 142 -4794 * 810 256 28 0 chr10 14987097 14987277 -125329488 + MER31B-int LTR ERV1 4734 4918 -18 1692 193 93 34 chr10 14987283 14987692 -125329073 + MER31B LTR ERV1 5 437 -29 353 203 0 0 chr10 14987714 14987778 -125328987 + LTR33 LTR ERVL 458 521 0 288 235 0 15 chr10 14989433 14989501 -125327264 - MLT1B LTR MaLR 0 390 324 2174 109 0 7 chr10 14989501 14989786 -125326979 + AluSc SINE Alu 1 283 -26 1040 166 0 0 chr10 14989791 14989985 -125326780 + AluSg/x SINE Alu 123 316 0 2207 94 13 13 chr10 14989988 14990287 -125326478 + AluY SINE Alu 1 299 -12 712 226 84 82 chr10 14990287 14990761 -125326004 + L1MC4 LINE L1 7567 8041 -1 216 0 0 0 chr10 14991672 14991696 -125325069 + (A)n Simple_repeat Simple_repeat 1 24 0 1683 146 58 143 chr10 14992044 14992477 -125324288 - MSTD LTR MaLR 0 396 1 1325 184 78 39 chr10 14993010 14993369 -125323396 - Charlie1b DNA MER1_type -100 423 51 263 307 0 0 chr10 14993504 14993579 -125323186 - L2 LINE L2 0 3313 3239 1330 197 119 25 chr10 14993580 14993900 -125322865 + MLT1A1 LTR MaLR 11 360 -5 268 212 45 0 chr10 14993900 14993966 -125322799 - L2 LINE L2 -70 3243 3175 433 243 36 0 chr10 14994031 14994142 -125322623 - MIR SINE MIR -101 161 47 1593 144 0 96 chr10 14994789 14995101 -125321664 - AluJb SINE Alu -30 282 1 269 262 74 0 chr10 14995108 14995230 -125321535 + L2 LINE L2 2202 2332 -982 407 360 80 0 chr10 14995549 14995788 -125320977 + MIR SINE MIR 5 262 0 2244 107 0 7 chr10 14997146 14997456 -125319309 + AluSx SINE Alu 1 308 -4 617 271 43 29 chr10 14997898 14998105 -125318660 + MIR SINE MIR 5 214 -48 235 283 10 50 chr10 14998190 14998289 -125318476 - MIR3 SINE MIR -3 205 111 287 256 70 0 chr10 14998426 14998512 -125318253 - MER91C DNA MER1_type 0 140 49 537 260 132 56 chr10 14998837 14999245 -125317520 + MLT1H LTR MaLR 108 546 -3 2012 105 4 0 chr10 14999466 14999732 -125317033 - AluSg SINE Alu -18 292 26 266 242 0 0 chr10 14999854 14999920 -125316845 - MIR SINE MIR -163 99 34 2061 133 3 19 chr10 15000103 15000420 -125316345 - AluJb SINE Alu 0 312 1 809 313 4 4 chr10 15000958 15001220 -125315545 - MIR SINE MIR 0 262 1 1183 253 56 11 chr10 15001459 15001877 -125314888 - MLT1J LTR MaLR -6 505 12 869 152 0 0 chr10 15002231 15002369 -125314396 + MSTD LTR MaLR 1 138 -258 214 288 9 72 chr10 15002385 15002496 -125314269 - MIR SINE MIR -9 253 150 828 241 15 20 chr10 15002558 15002757 -125314008 + MSTD LTR MaLR 168 365 0 198 0 0 0 chr10 15002972 15002994 -125313771 + (A)n Simple_repeat Simple_repeat 1 22 0 381 277 83 14 chr10 15003178 15003442 -125313323 - L1MC4a LINE L1 -1913 5895 5581 311 297 140 18 chr10 15004493 15004863 -125311902 + L2 LINE L2 2590 3021 -292 539 286 35 52 chr10 15005095 15005382 -125311383 + L2 LINE L2 3031 3312 -1 1746 148 0 38 chr10 15005912 15006203 -125310562 - AluJb SINE Alu -20 292 13 1842 143 4 7 chr10 15006685 15006965 -125309800 + AluSx SINE Alu 1 279 -33 752 131 0 8 chr10 15006969 15007099 -125309666 + (GGGAA)n Simple_repeat Simple_repeat 2 130 0 4764 75 33 8 chr10 15007661 15008297 -125308468 + LTR8 LTR ERV1 1 652 -39 233 278 157 0 chr10 15008390 15008498 -125308267 + L2 LINE L2 2607 2731 -583 2384 78 3 0 chr10 15008557 15008850 -125307915 + AluSp SINE Alu 5 298 -15 2179 153 44 33 chr10 15008883 15009428 -125307337 + MLT2A2 LTR ERVL 1 554 0 354 248 90 55 chr10 15009798 15009856 -125306909 + L2 LINE L2 3121 3176 -96 3704 144 41 3 chr10 15009856 15010468 -125306297 + MER41B LTR ERV1 1 635 0 354 248 90 55 chr10 15010468 15010554 -125306211 + L2 LINE L2 3176 3270 -2 2948 137 23 19 chr10 15010634 15011117 -125305648 - LTR45B LTR ERV1 -2 487 3 1916 197 53 14 chr10 15012041 15012472 -125304293 + LTR65 LTR ERV1 165 612 -57 2088 112 3 11 chr10 15012473 15012759 -125304006 + AluSx SINE Alu 1 284 -28 290 310 218 5 chr10 15012958 15013174 -125303591 + MIR SINE MIR 1 262 0 1757 241 102 12 chr10 15013357 15013991 -125302774 + L2 LINE L2 2380 3120 -193 312 91 0 0 chr10 15013991 15014035 -125302730 + (CA)n Simple_repeat Simple_repeat 1 44 0 1757 241 102 12 chr10 15014035 15014249 -125302516 + L2 LINE L2 3120 3313 0 751 235 38 6 chr10 15014644 15014827 -125301938 + MER5A DNA MER1_type 1 189 0 1931 162 0 3 chr10 15014908 15015217 -125301548 + AluJo SINE Alu 1 308 -4 2155 135 3 0 chr10 15015840 15016151 -125300614 + AluSx SINE Alu 1 312 0 4487 176 40 12 chr10 15016240 15017121 -125299644 + L1MB3 LINE L1 5278 6180 -3 321 316 97 13 chr10 15017166 15017321 -125299444 + L2 LINE L2 2816 2983 -289 388 210 183 124 chr10 15017351 15017774 -125298991 + MLT1J2 LTR MaLR 1 438 -8 301 288 160 56 chr10 15017786 15018036 -125298729 + L2 LINE L2 3038 3313 0 280 338 108 0 chr10 15018468 15018607 -125298158 + MIR3 SINE MIR 10 163 -45 1523 182 70 3 chr10 15018686 15018988 -125297777 + MER33 DNA MER1_type 1 322 -2 2176 108 0 26 chr10 15019302 15019609 -125297156 + AluSc SINE Alu 1 299 -10 1845 122 0 11 chr10 15019722 15019992 -125296773 - AluSx SINE Alu 0 312 46 4392 84 56 25 chr10 15019992 15020584 -125296181 + LTR66 LTR ERVL 1 610 0 416 41 0 0 chr10 15020584 15020633 -125296132 - AluSx SINE Alu -263 50 2 350 244 12 0 chr10 15020796 15020878 -125295887 + MER5A DNA MER1_type 9 91 -98 9490 110 9 3 chr10 15021067 15022342 -125294423 + HSMAR1 DNA Mariner 1 1283 -4 369 338 62 29 chr10 15022770 15022980 -125293785 + L2 LINE L2 3097 3313 0 2208 108 0 10 chr10 15023895 15024192 -125292573 + AluSx SINE Alu 7 300 -12 1715 78 74 47 chr10 15024245 15024501 -125292264 - AluSc SINE Alu -9 300 38 241 271 74 138 chr10 15025321 15025524 -125291241 + L2 LINE L2 3029 3218 -54 189 0 0 0 chr10 15026110 15026131 -125290634 + (CATATA)n Simple_repeat Simple_repeat 6 26 0 1133 149 56 19 chr10 15026505 15026719 -125290046 + MLT2B1 LTR ERVL 1 222 -298 836 145 0 29 chr10 15026719 15026857 -125289908 - FLAM_C SINE Alu -9 134 1 1219 233 19 22 chr10 15026858 15027129 -125289636 + MLT2B3 LTR ERVL 226 495 -59 546 29 0 0 chr10 15027129 15027197 -125289568 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1949 159 3 0 chr10 15027355 15027656 -125289109 - AluSx SINE Alu -10 302 1 420 89 0 0 chr10 15028184 15028240 -125288525 + MADE1 DNA Mariner 25 80 0 2013 113 0 17 chr10 15028406 15028699 -125288066 - AluSx SINE Alu -3 309 22 180 0 0 0 chr10 15029637 15029657 -125287108 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr10 15029889 15029915 -125286850 + AT_rich Low_complexity Low_complexity 1 26 0 225 359 33 22 chr10 15030087 15030179 -125286586 - MIR SINE MIR -81 127 35 2386 135 27 40 chr10 15030272 15030539 -125286226 + L1MA2 LINE L1 5865 6125 -179 2121 113 3 10 chr10 15030539 15030832 -125285933 - AluSc SINE Alu -18 291 1 2386 135 27 40 chr10 15030832 15031008 -125285757 + L1MA2 LINE L1 6125 6302 -2 803 178 108 0 chr10 15031417 15031574 -125285191 + AluJo SINE Alu 14 187 -125 490 222 0 0 chr10 15031590 15031671 -125285094 + FLAM_A SINE Alu 5 85 -57 193 280 0 20 chr10 15031950 15032000 -125284765 + MIR SINE MIR 54 102 -106 1779 237 40 9 chr10 15032783 15033231 -125283534 + MLT1C LTR MaLR 6 467 0 271 277 88 19 chr10 15033232 15033391 -125283374 + L2 LINE L2 2221 2390 -924 334 295 72 47 chr10 15033470 15033748 -125283017 + L2 LINE L2 2583 2867 -447 23 0 0 0 chr10 15034046 15034069 -125282696 + AT_rich Low_complexity Low_complexity 1 23 0 3292 68 53 0 chr10 15034070 15034483 -125282282 - L1PA8 LINE L1 -15 6157 5723 192 308 173 10 chr10 15034492 15034596 -125282169 + L2 LINE L2 3139 3259 -13 317 24 24 0 chr10 15034596 15034638 -125282127 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 905 255 166 28 chr10 15034877 15035305 -125281460 + MLT1D LTR MaLR 18 504 -1 647 271 17 0 chr10 15035471 15035648 -125281117 - MIR SINE MIR -16 246 67 580 246 142 24 chr10 15036670 15036881 -125279884 - MIR SINE MIR -12 250 15 826 150 0 0 chr10 15038253 15038373 -125278392 - AluSg/x SINE Alu -26 284 165 368 287 0 66 chr10 15038462 15038598 -125278167 - MIR SINE MIR -110 152 26 2353 109 0 3 chr10 15038739 15039052 -125277713 - AluSx SINE Alu 0 312 1 4301 89 13 2 chr10 15039827 15040375 -125276390 + MER41A LTR ERV1 1 554 0 1745 162 7 36 chr10 15041090 15041393 -125275372 - AluJo SINE Alu -18 294 1 1893 158 0 7 chr10 15041677 15041974 -125274791 + AluSx SINE Alu 9 303 -9 894 140 18 0 chr10 15041977 15042200 -125274565 + GA-rich Low_complexity Low_complexity 1 227 0 780 154 0 0 chr10 15042203 15042333 -125274432 - L1ME LINE L1 -714 5452 5323 349 172 12 68 chr10 15042333 15042496 -125274269 + GA-rich Low_complexity Low_complexity 4 157 0 17728 58 58 6 chr10 15042688 15045003 -125271762 + L1P LINE L1 3 2437 -3709 269 361 12 0 chr10 15045496 15045579 -125271186 - MIR SINE MIR -105 103 20 182 375 0 0 chr10 15047136 15047184 -125269581 + L3b LINE CR1 1500 1547 -36 759 198 16 105 chr10 15048326 15048574 -125268191 - LTR12 LTR ERV1 -251 463 238 1674 185 17 8 chr10 15048917 15049271 -125267494 - MSTA LTR MaLR 0 428 1 8343 183 57 7 chr10 15049271 15050763 -125266002 - MSTA-int LTR MaLR 0 1651 75 1827 154 54 40 chr10 15050763 15051133 -125265632 + THE1C LTR MaLR 1 375 0 8343 183 57 7 chr10 15051133 15051212 -125265553 - MSTA-int LTR MaLR -1576 75 1 2355 163 17 22 chr10 15051212 15051617 -125265148 - MSTA LTR MaLR 0 428 26 602 360 51 25 chr10 15051627 15052097 -125264668 + ERVL LTR ERVL 2034 2515 -3249 606 167 4 224 chr10 15052134 15052397 -125264368 + L1MA9 LINE L1 5414 5618 -550 4133 152 18 24 chr10 15052497 15053285 -125263480 - L1MA2 LINE L1 -360 5944 5171 1800 168 30 3 chr10 15053285 15053582 -125263183 - AluSx SINE Alu -7 305 1 4133 152 18 24 chr10 15053582 15054034 -125262731 - L1MA2 LINE L1 -1133 5171 4718 3610 123 35 46 chr10 15054034 15054660 -125262105 + L1PB3 LINE L1 5534 6153 -1 773 247 6 11 chr10 15054857 15055061 -125261704 + MLT1F1 LTR MaLR 305 497 -45 1918 213 60 2 chr10 15055436 15055853 -125260912 - MER67C LTR ERV1 -63 647 207 1587 180 37 94 chr10 15055962 15056367 -125260398 + MLT1B LTR MaLR 7 388 -2 21 36 0 0 chr10 15056554 15056582 -125260183 + AT_rich Low_complexity Low_complexity 1 28 0 249 290 65 0 chr10 15056998 15057091 -125259674 + MIR SINE MIR 120 218 -44 2031 98 0 38 chr10 15057313 15057600 -125259165 + AluSx SINE Alu 29 304 -8 2130 168 19 3 chr10 15060178 15060608 -125256157 + L1MA9 LINE L1 5703 6161 -130 208 305 0 49 chr10 15060608 15060638 -125256127 + GA-rich Low_complexity Low_complexity 1 31 -47 1538 122 22 0 chr10 15060638 15060868 -125255897 + L1MA2 LINE L1 6070 6304 0 208 305 0 49 chr10 15060868 15060919 -125255846 + GA-rich Low_complexity Low_complexity 31 78 0 608 110 0 10 chr10 15060919 15061019 -125255746 + (GGGA)n Simple_repeat Simple_repeat 3 101 0 1035 92 0 0 chr10 15061019 15061160 -125255605 + L1MA9 LINE L1 6171 6311 -1 1115 186 39 10 chr10 15061223 15061427 -125255338 - MER6B DNA MER2_type 0 210 1 2223 106 0 37 chr10 15061892 15062213 -125254552 - AluSc SINE Alu 0 309 1 4236 97 13 2 chr10 15062382 15062929 -125253836 + MER41A LTR ERV1 2 554 0 4985 135 35 5 chr10 15063684 15064438 -125252327 - MER4E LTR ERV1 -3 776 1 4052 98 29 29 chr10 15064995 15065549 -125251216 + MER41A LTR ERV1 1 554 0 31 0 0 0 chr10 15065869 15065900 -125250865 + AT_rich Low_complexity Low_complexity 1 31 0 2609 37 7 0 chr10 15066215 15066512 -125250253 + L1PA3 LINE L1 5854 6152 -3 33 25 0 0 chr10 15066512 15066552 -125250213 + AT_rich Low_complexity Low_complexity 1 40 0 2857 212 30 58 chr10 15067049 15067911 -125248854 + L1MC4 LINE L1 7202 8039 -3 1773 288 36 23 chr10 15068619 15069022 -125247743 + L2 LINE L2 2312 2734 -579 2418 161 0 20 chr10 15069022 15069420 -125247345 - MLT1B LTR MaLR 0 390 1 1773 288 36 23 chr10 15069420 15069769 -125246996 + L2 LINE L2 2734 3077 -236 1614 171 84 10 chr10 15069784 15070093 -125246672 + MER61A LTR ERV1 1 332 -11 563 286 27 45 chr10 15070106 15070330 -125246435 + L2 LINE L2 3094 3313 0 21 0 0 0 chr10 15070583 15070604 -125246161 + AT_rich Low_complexity Low_complexity 1 21 0 2392 79 3 0 chr10 15070611 15070903 -125245862 + AluSp SINE Alu 3 295 -18 395 212 74 74 chr10 15070918 15071107 -125245658 - HAL1 LINE L1 0 2507 2319 391 228 26 61 chr10 15071120 15071234 -125245531 - MER104 DNA Tc2 -70 110 1 235 210 111 49 chr10 15072074 15072155 -125244610 - MLT1I LTR MaLR 0 409 324 302 195 85 14 chr10 15072302 15072399 -125244366 - MLT1J2 LTR MaLR -285 161 46 2623 40 0 3 chr10 15072421 15072724 -125244041 + AluY SINE Alu 1 302 -9 228 320 53 0 chr10 15072830 15072905 -125243860 + L2 LINE L2 3235 3313 0 408 324 7 14 chr10 15072908 15073047 -125243718 - MLT1L LTR MaLR -458 157 20 192 77 0 0 chr10 15073092 15073118 -125243647 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 240 334 71 53 chr10 15073153 15073476 -125243289 + L2 LINE L2 2557 2885 -429 181 345 23 35 chr10 15073552 15073639 -125243126 + L2 LINE L2 3017 3102 -170 4117 109 11 0 chr10 15073771 15074319 -125242446 + MER41A LTR ERV1 1 554 0 210 191 24 0 chr10 15074397 15074439 -125242326 - L2 LINE L2 -5 3308 3266 263 239 9 101 chr10 15076386 15076495 -125240270 + L2 LINE L2 3215 3313 0 225 147 221 59 chr10 15076644 15076672 -125240093 + L1ME3 LINE L1 6054 6076 -86 279 71 0 0 chr10 15076672 15076714 -125240051 + (CA)n Simple_repeat Simple_repeat 2 43 0 225 147 221 59 chr10 15076714 15076753 -125240012 + L1ME3 LINE L1 6076 6132 -30 3008 176 51 7 chr10 15077508 15078081 -125238684 + L1MA4 LINE L1 5700 6297 -3 357 171 53 26 chr10 15079149 15079225 -125237540 - L1MA6 LINE L1 -7 6293 6216 602 236 44 35 chr10 15079768 15079978 -125236787 - MER20B DNA MER1_type -1 218 3 2676 146 53 5 chr10 15080370 15080782 -125235983 + MSTB1 LTR MaLR 1 432 0 551 314 36 32 chr10 15080969 15081217 -125235548 + L2 LINE L2 2930 3178 -135 531 217 47 16 chr10 15081842 15081971 -125234794 - L2 LINE L2 -6 3307 3175 2214 109 6 16 chr10 15082058 15082371 -125234394 + AluSx SINE Alu 1 310 -2 570 188 10 0 chr10 15083786 15083887 -125232878 - MER45A DNA AcHobo 0 178 77 1808 162 30 3 chr10 15083964 15084304 -125232461 - AluSx SINE Alu 0 348 1 370 98 0 0 chr10 15084680 15084731 -125232034 - MADE1 DNA Mariner 0 80 30 735 178 0 86 chr10 15084735 15084887 -125231878 + FRAM SINE Alu 20 158 -18 2069 119 0 53 chr10 15084976 15085294 -125231471 - AluSx SINE Alu -9 303 3 663 107 0 0 chr10 15086708 15086792 -125229973 + AluS SINE Alu 1 84 -229 434 91 197 0 chr10 15087401 15087467 -125229298 - MADE1 DNA Mariner -1 79 1 926 94 31 0 chr10 15087504 15087632 -125229133 + L1PA5 LINE L1 6017 6148 -6 264 59 0 0 chr10 15087729 15087763 -125229002 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 182 371 51 17 chr10 15087763 15087941 -125228824 - L2 LINE L2 -12 3301 3118 1848 127 0 80 chr10 15088078 15088416 -125228349 + AluSx SINE Alu 2 312 0 2970 234 170 25 chr10 15088428 15088574 -125228191 + L1ME LINE L1 3562 3686 -2460 1525 208 154 40 chr10 15088574 15089027 -125227738 + MLT1D LTR MaLR 1 505 0 2970 234 170 25 chr10 15089027 15090141 -125226624 + L1ME LINE L1 3686 5004 -1142 218 111 37 56 chr10 15090141 15090249 -125226516 + (TA)n Simple_repeat Simple_repeat 1 106 0 253 97 43 65 chr10 15090264 15090357 -125226408 + (TA)n Simple_repeat Simple_repeat 2 92 0 861 137 0 0 chr10 15090458 15090582 -125226183 + AluJb SINE Alu 1 124 -188 1025 195 0 0 chr10 15090655 15090824 -125225941 + AluJb SINE Alu 129 297 -15 805 255 69 31 chr10 15090825 15091243 -125225522 + L1ME LINE L1 5200 5637 -525 488 223 137 29 chr10 15091243 15091418 -125225347 - L1M4 LINE L1 -1876 4270 4077 643 283 123 35 chr10 15091822 15092588 -125224177 + L1ME LINE L1 4888 5729 -433 2167 102 0 14 chr10 15092704 15093029 -125223736 - AluSc SINE Alu 0 309 1 26 30 0 0 chr10 15093348 15093381 -125223384 + AT_rich Low_complexity Low_complexity 1 33 0 291 278 0 22 chr10 15095303 15095437 -125221328 + G-rich Low_complexity Low_complexity 1 131 0 496 328 6 6 chr10 15095667 15095847 -125220918 + (CA)n Simple_repeat Simple_repeat 1 180 0 301 308 8 23 chr10 15095817 15095947 -125220818 + (CATA)n Simple_repeat Simple_repeat 1 128 0 * 247 299 10 0 chr10 15095953 15096202 -125220563 + (CA)n Simple_repeat Simple_repeat 1 251 0 330 274 19 0 chr10 15096348 15096505 -125220260 + (CA)n Simple_repeat Simple_repeat 1 160 0 338 237 0 9 chr10 15096532 15096646 -125220119 + (CA)n Simple_repeat Simple_repeat 1 113 0 382 233 0 0 chr10 15097074 15097147 -125219618 + MER82 DNA MER2_type 14 86 -567 267 190 116 66 chr10 15097190 15097311 -125219454 - MIR3 SINE MIR -78 130 4 1063 110 12 13 chr10 15097649 15097831 -125218934 + L1P4 LINE L1 5346 5518 -646 * 2005 181 3 18 chr10 15097823 15098193 -125218572 + L1MA2 LINE L1 4885 5250 -896 2735 100 0 14 chr10 15098193 15098553 -125218212 + THE1A LTR MaLR 1 355 0 2005 181 3 18 chr10 15098553 15098574 -125218191 + L1MA2 LINE L1 5250 5270 -876 4885 107 14 17 chr10 15098710 15099433 -125217332 + L1MA2 LINE L1 5583 6303 -1 3463 50 29 7 chr10 15099449 15099870 -125216895 + L1PA8 LINE L1 5743 6172 0 214 333 0 0 chr10 15100279 15100336 -125216429 + L2 LINE L2 3254 3310 -3 234 175 35 0 chr10 15101502 15101559 -125215206 + L2 LINE L2 2561 2619 -695 731 197 34 48 chr10 15101597 15101805 -125214960 - MER96B DNA MER1_type? -21 396 192 2157 130 3 0 chr10 15101835 15102143 -125214622 - AluSx SINE Alu -3 309 1 667 199 28 39 chr10 15102602 15102783 -125213982 + MER96B DNA MER1_type? 192 370 -47 502 217 130 25 chr10 15102650 15102811 -125213954 - MER96B DNA MER1_type? -238 179 2 * 318 340 94 20 chr10 15102825 15103028 -125213737 + L2 LINE L2 2667 2884 -430 1834 258 4 37 chr10 15103176 15103638 -125213127 + LTR2 LTR ERV1 3 449 0 1608 196 48 18 chr10 15103641 15103978 -125212787 + MLT2C1 LTR ERVL 3 349 -48 387 60 0 0 chr10 15104043 15104093 -125212672 - MADE1 DNA Mariner -30 50 1 453 208 9 19 chr10 15104168 15104274 -125212491 + L2 LINE L2 3137 3241 -31 766 296 142 13 chr10 15104530 15104738 -125212027 + L2 LINE L2 2611 2791 -522 2387 122 30 25 chr10 15104738 15105099 -125211666 + THE1B LTR MaLR 1 363 -1 766 296 142 13 chr10 15105099 15105527 -125211238 + L2 LINE L2 2791 3312 -1 1795 169 3 17 chr10 15106049 15106344 -125210421 - AluJo SINE Alu -21 291 1 2128 135 3 0 chr10 15106955 15107259 -125209506 + AluSq SINE Alu 1 305 -8 206 345 53 0 chr10 15107404 15107517 -125209248 - L2 LINE L2 -1401 1913 1795 840 243 44 44 chr10 15108126 15108503 -125208262 + L1MEd LINE L1 2393 2759 -4806 442 282 30 79 chr10 15108661 15108701 -125208064 + MIR SINE MIR 2 42 -220 2674 118 14 16 chr10 15108701 15109066 -125207699 - THE1B LTR MaLR 0 364 1 442 282 30 79 chr10 15109066 15109268 -125207497 + MIR SINE MIR 42 232 -30 3070 113 19 9 chr10 15109268 15109692 -125207073 - MSTA LTR MaLR 0 428 1 442 282 30 79 chr10 15109692 15109714 -125207051 + MIR SINE MIR 232 254 -8 1964 116 0 8 chr10 15110251 15110518 -125206247 - AluSp SINE Alu -14 299 35 2238 102 0 7 chr10 15110634 15110927 -125205838 - AluSc SINE Alu -18 291 1 375 224 87 40 chr10 15111133 15111278 -125205487 + L1MEd LINE L1 2878 2999 -4566 1739 167 25 3 chr10 15111332 15111614 -125205151 - AluJb SINE Alu -22 290 3 498 235 159 72 chr10 15111922 15112096 -125204669 + L1ME4a LINE L1 5635 5792 -329 1952 126 19 50 chr10 15112096 15112414 -125204351 + AluSx SINE Alu 1 308 -4 498 235 159 72 chr10 15112414 15112686 -125204079 + L1ME4a LINE L1 5792 6120 -1 2159 93 4 0 chr10 15114119 15114397 -125202368 + AluSq SINE Alu 31 309 -4 200 271 0 0 chr10 15114440 15114488 -125202277 + (CA)n Simple_repeat Simple_repeat 1 48 0 272 286 71 50 chr10 15116393 15116435 -125200330 - MIR SINE MIR -118 144 104 1888 210 39 80 chr10 15116435 15117073 -125199692 + LTR9 LTR ERV1 1 612 0 272 286 71 50 chr10 15117073 15117170 -125199595 - MIR SINE MIR -158 104 2 1897 258 32 28 chr10 15117384 15117986 -125198779 + L1MD3 LINE L1 7380 7983 -12 2180 115 3 3 chr10 15117990 15118295 -125198470 - AluSg SINE Alu -5 305 1 1732 157 16 63 chr10 15118411 15118775 -125197990 + MER7A DNA MER2_type 1 345 -1 360 0 0 0 chr10 15119078 15119118 -125197647 + (CA)n Simple_repeat Simple_repeat 2 41 0 433 171 12 0 chr10 15120065 15120147 -125196618 - L1MB3 LINE L1 -7 6176 6094 273 204 204 38 chr10 15120151 15120247 -125196518 - MER5C DNA MER1_type -68 256 177 1956 137 0 11 chr10 15120247 15120552 -125196213 + AluSx SINE Alu 1 302 0 273 204 204 38 chr10 15120552 15120640 -125196125 - MER5C DNA MER1_type -147 177 40 432 226 120 69 chr10 15120930 15121052 -125195713 + MLT1F LTR MaLR 1 115 -440 2335 112 0 0 chr10 15121052 15121357 -125195408 + AluSx SINE Alu 1 305 -7 432 226 120 69 chr10 15121357 15121484 -125195281 + MLT1F LTR MaLR 115 262 -293 203 250 0 0 chr10 15121503 15121555 -125195210 + GA-rich Low_complexity Low_complexity 2 53 0 395 257 28 18 chr10 15121565 15121674 -125195091 + MLT1F LTR MaLR 393 502 -88 2028 164 33 39 chr10 15121680 15122011 -125194754 + MLT1B LTR MaLR 3 333 -57 3692 120 0 15 chr10 15122011 15122543 -125194222 + MER1A DNA MER1_type 1 524 -3 2028 164 33 39 chr10 15122543 15122601 -125194164 + MLT1B LTR MaLR 333 390 0 390 127 0 76 chr10 15122603 15122682 -125194083 + MLT1G1 LTR MaLR 494 588 -1 1161 172 39 10 chr10 15123905 15124109 -125192656 + AluJb SINE Alu 1 210 -102 201 176 0 0 chr10 15124131 15124165 -125192600 + A-rich Low_complexity Low_complexity 1 34 0 370 309 164 30 chr10 15124412 15124716 -125192049 + MER115 DNA AcHobo 3 347 -346 924 132 23 40 chr10 15125833 15126007 -125190758 + FRAM SINE Alu 6 176 0 1277 142 19 69 chr10 15126059 15126286 -125190479 - THE1C LTR MaLR 0 375 161 2048 123 7 29 chr10 15126286 15126594 -125190171 + AluSx SINE Alu 1 301 -11 1277 142 19 69 chr10 15126594 15126627 -125190138 - THE1C LTR MaLR -214 161 128 274 330 215 0 chr10 15127070 15127279 -125189486 - MIR SINE MIR -3 259 6 2200 111 16 7 chr10 15128818 15128999 -125187766 - AluSx SINE Alu 0 312 125 2148 113 3 25 chr10 15128999 15129318 -125187447 - AluSx SINE Alu 0 312 1 2200 111 16 7 chr10 15129318 15129442 -125187323 - AluSx SINE Alu -187 125 4 1507 143 52 45 chr10 15129689 15129976 -125186789 - AluJo SINE Alu -23 289 1 923 247 92 32 chr10 15129977 15130357 -125186408 - L2 LINE L2 -7 3306 2904 255 264 100 45 chr10 15130357 15130467 -125186298 - MARNA DNA Mariner -26 560 445 2284 182 6 34 chr10 15131022 15131494 -125185271 + MER65C LTR ERV1 2 460 -1 5453 146 21 12 chr10 15132187 15133104 -125183661 - L1MC1 LINE L1 -6 6327 5403 254 268 165 0 chr10 15133234 15133331 -125183434 - L2 LINE L2 0 3272 3160 291 371 86 0 chr10 15133423 15133620 -125183145 + L2 LINE L2 2943 3156 -157 2020 184 93 18 chr10 15133718 15134170 -125182595 - MER66B LTR ERV1 0 486 1 1689 255 88 21 chr10 15134170 15134718 -125182047 - HsTC2 DNA Tc2 -1310 588 1 269 246 44 79 chr10 15134730 15134844 -125181921 + L2 LINE L2 3171 3280 -33 274 214 67 22 chr10 15134852 15134941 -125181824 + HsTC2 DNA Tc2 360 452 -1446 * 3382 139 6 19 chr10 15134925 15135296 -125181469 + MER49 LTR ERV1 26 389 -534 2347 85 0 0 chr10 15135296 15135591 -125181174 + AluSq SINE Alu 1 295 -18 3382 139 6 19 chr10 15135591 15135751 -125181014 + MER49 LTR ERV1 389 550 -373 309 151 0 0 chr10 15135769 15135822 -125180943 + GA-rich Low_complexity Low_complexity 4 56 0 1249 180 69 114 chr10 15135873 15136258 -125180507 + MER49 LTR ERV1 334 923 0 640 157 26 13 chr10 15136640 15136793 -125179972 + GA-rich Low_complexity Low_complexity 3 157 0 218 237 32 75 chr10 15137665 15137758 -125179007 - L2 LINE L2 -6 3266 3178 316 179 18 0 chr10 15138785 15138841 -125177924 + MLT1E2 LTR MaLR 219 275 -351 428 123 14 0 chr10 15138872 15138945 -125177820 + (CA)n Simple_repeat Simple_repeat 1 74 0 1206 211 68 4 chr10 15138951 15139062 -125177703 + MLT1E2 LTR MaLR 344 446 -180 183 42 0 0 chr10 15139062 15139086 -125177679 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 1206 211 68 4 chr10 15139086 15139240 -125177525 + MLT1E2 LTR MaLR 446 626 0 2332 115 0 0 chr10 15139245 15139557 -125177208 + AluSx SINE Alu 1 312 0 782 285 35 22 chr10 15139577 15139946 -125176819 - L1ME LINE L1 -528 5636 5263 789 295 128 19 chr10 15139954 15140452 -125176313 - L1ME LINE L1 -1001 5145 4570 378 42 0 0 chr10 15140452 15140500 -125176265 + (CA)n Simple_repeat Simple_repeat 2 49 0 789 295 128 19 chr10 15140500 15140595 -125176170 - L1ME LINE L1 -1576 4570 4487 27 0 0 0 chr10 15140794 15140821 -125175944 + AT_rich Low_complexity Low_complexity 1 27 0 1166 231 33 18 chr10 15140821 15141154 -125175611 - L1MA9 LINE L1 -38 6274 5937 319 75 57 0 chr10 15141183 15141236 -125175529 - L1MC2 LINE L1 0 6344 6289 1628 271 54 57 chr10 15141253 15141511 -125175254 - L1ME LINE L1 -1776 4370 4113 1732 165 33 3 chr10 15141511 15141814 -125174951 + AluJb SINE Alu 1 312 0 1628 271 54 57 chr10 15141814 15142464 -125174301 - L1ME LINE L1 -2033 4113 3465 233 234 0 0 chr10 15143028 15143075 -125173690 - L3 LINE CR1 -4 1573 1527 4489 78 19 0 chr10 15143348 15143931 -125172834 + L1PA10 LINE L1 5556 6152 -16 188 57 0 57 chr10 15143931 15143966 -125172799 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 196 236 28 28 chr10 15144477 15144549 -125172216 + MIR3 SINE MIR 2 73 -135 846 50 0 0 chr10 15144549 15144650 -125172115 - AluY SINE Alu -7 304 204 441 262 89 48 chr10 15144650 15144818 -125171947 + MIR SINE MIR 67 241 -21 208 239 0 0 chr10 15145076 15145122 -125171643 + (TG)n Simple_repeat Simple_repeat 1 46 0 228 132 57 94 chr10 15145513 15145566 -125171199 - AluJo SINE Alu -166 136 86 1292 157 0 68 chr10 15145566 15145802 -125170963 - AluJo SINE Alu -92 220 1 267 67 0 67 chr10 15146348 15146393 -125170372 - L2 LINE L2 -6 3307 3266 2386 72 0 26 chr10 15146678 15146982 -125169783 + AluSq SINE Alu 1 296 -17 498 291 58 54 chr10 15147216 15147264 -125169501 - MIR SINE MIR -1 261 215 1865 137 3 14 chr10 15147264 15147548 -125169217 - AluJb SINE Alu -20 292 12 498 291 58 54 chr10 15147548 15147613 -125169152 - MIR SINE MIR -47 215 152 2048 157 0 0 chr10 15147613 15147918 -125168847 - AluSx SINE Alu -7 305 1 498 291 58 54 chr10 15147918 15148044 -125168721 - MIR SINE MIR -110 152 20 21 0 0 0 chr10 15149787 15149808 -125166957 + AT_rich Low_complexity Low_complexity 1 21 0 5479 154 36 95 chr10 15150420 15151067 -125165698 - L1 LINE L1 -1535 4611 3927 282 216 20 0 chr10 15151067 15151118 -125165647 - MER66B LTR ERV1 -140 346 295 5479 154 36 95 chr10 15151118 15151565 -125165200 - L1 LINE L1 -2219 3927 3553 1211 159 195 16 chr10 15151565 15151816 -125164949 - AluJo SINE Alu -16 296 1 5479 154 36 95 chr10 15151816 15151986 -125164779 - L1 LINE L1 -2593 3553 3374 346 336 0 9 chr10 15152282 15152389 -125164376 + MIR SINE MIR 1 106 -156 * 384 302 79 0 chr10 15152384 15152523 -125164242 - L2 LINE L2 0 3313 3164 603 323 142 6 chr10 15152709 15153195 -125163570 - L2 LINE L2 -412 2902 2351 1411 193 39 8 chr10 15153196 15153455 -125163310 + Tigger7 DNA MER2_type 1 267 -2220 574 182 10 0 chr10 15153452 15153551 -125163214 + Tigger7 DNA MER2_type 2392 2491 0 * 362 341 0 0 chr10 15153551 15153689 -125163076 + MIR SINE MIR 101 238 -24 272 319 22 11 chr10 15153825 15153916 -125162849 + L2 LINE L2 3134 3225 -47 2281 103 0 7 chr10 15154939 15155241 -125161524 - AluSx SINE Alu -12 300 1 1753 147 35 0 chr10 15156272 15156557 -125160208 + AluJb SINE Alu 1 295 -17 264 250 47 61 chr10 15156614 15156762 -125160003 - L1ME4a LINE L1 -96 6025 5880 245 202 34 67 chr10 15156950 15157039 -125159726 - L1MA5 LINE L1 0 6300 6215 315 241 83 88 chr10 15157050 15157169 -125159596 - L1ME4a LINE L1 -303 5818 5699 628 163 0 131 chr10 15157169 15157322 -125159443 - FLAM_A SINE Alu 0 133 1 315 241 83 88 chr10 15157322 15157430 -125159335 - L1ME4a LINE L1 -422 5699 5592 2000 231 27 19 chr10 15157434 15158110 -125158655 - L1MB7 LINE L1 -321 5863 5307 407 368 76 21 chr10 15158204 15158625 -125158140 - L1MB7 LINE L1 -978 5168 4725 237 176 122 137 chr10 15158780 15158911 -125157854 + L1MC4 LINE L1 6700 6828 -1214 189 0 0 0 chr10 15158939 15158960 -125157805 + (A)n Simple_repeat Simple_repeat 1 21 0 1876 145 0 39 chr10 15159386 15159697 -125157068 + AluJb SINE Alu 1 299 -13 4156 25 0 0 chr10 15160300 15160782 -125155983 - L1PA3 LINE L1 -2066 4080 3599 11108 30 0 2 chr10 15160782 15162856 -125153909 + L1PA3 LINE L1 4086 6152 -3 1706 165 29 0 chr10 15162924 15163203 -125153562 + AluJo SINE Alu 1 287 -25 628 262 147 39 chr10 15163514 15163650 -125153115 + L1MC4 LINE L1 6459 6579 -1463 2347 105 0 7 chr10 15163650 15163954 -125152811 - AluSx SINE Alu -10 302 1 628 262 147 39 chr10 15163954 15164096 -125152669 + L1MC4 LINE L1 6579 6767 -1275 387 0 0 0 chr10 15164447 15164490 -125152275 + (CA)n Simple_repeat Simple_repeat 2 44 0 258 32 0 0 chr10 15164489 15164520 -125152245 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 308 358 80 6 chr10 15164553 15164729 -125152036 - MARNA DNA Mariner -91 495 307 221 283 0 0 chr10 15168965 15169025 -125147740 - L2 LINE L2 0 3272 3213 2423 80 0 7 chr10 15169153 15169452 -125147313 - AluSg SINE Alu -13 297 1 1051 146 12 0 chr10 15170606 15170770 -125145995 - AluJb SINE Alu -11 301 136 2175 120 0 3 chr10 15170773 15171081 -125145684 - AluSq SINE Alu -6 307 1 634 272 50 29 chr10 15172400 15172639 -125144126 - L1ME LINE L1 -355 5766 5523 2186 94 0 23 chr10 15172915 15173214 -125143551 - AluSx SINE Alu -20 292 1 2527 68 0 0 chr10 15173579 15173875 -125142890 - AluY SINE Alu -15 296 1 250 318 65 56 chr10 15174856 15174913 -125141852 - MIR SINE MIR -19 243 188 2310 114 0 0 chr10 15174913 15175220 -125141545 - AluSx SINE Alu -5 307 1 250 318 65 56 chr10 15175220 15175376 -125141389 - MIR SINE MIR -74 188 28 290 200 17 23 chr10 15175689 15175779 -125140986 - MIR3 SINE MIR -24 184 96 305 321 83 24 chr10 15177709 15177961 -125138804 + LTR34 LTR ERV1 269 535 -164 1777 150 9 38 chr10 15177976 15178296 -125138469 + AluJo SINE Alu 1 311 -1 1954 137 30 3 chr10 15178298 15178597 -125138168 + AluSx SINE Alu 1 307 -5 235 135 0 96 chr10 15178662 15178714 -125138051 + LTR23 LTR ERV1 342 388 -49 244 270 22 45 chr10 15178956 15179045 -125137720 + L2 LINE L2 3005 3091 -222 949 299 169 8 chr10 15179637 15180228 -125136537 - L2 LINE L2 -341 2973 2288 199 303 45 0 chr10 15181978 15182044 -125134721 + MIR SINE MIR 76 144 -64 292 296 117 52 chr10 15184129 15184296 -125132469 + MIR SINE MIR 18 205 -57 2359 81 10 3 chr10 15184296 15184592 -125132173 + AluSc SINE Alu 2 299 -10 292 296 117 52 chr10 15184592 15184654 -125132111 + MIR SINE MIR 205 262 0 1589 235 46 28 chr10 15184986 15185445 -125131320 + L1ME3A LINE L1 5678 6144 -26 263 332 63 38 chr10 15185549 15185787 -125130978 + MIR SINE MIR 5 248 -14 216 279 77 19 chr10 15187559 15187663 -125129102 - L2 LINE L2 -19 3294 3185 1877 120 13 57 chr10 15188712 15189028 -125127737 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 15190427 15190448 -125126317 + AT_rich Low_complexity Low_complexity 1 21 0 678 241 101 51 chr10 15191279 15191566 -125125199 + L1M4 LINE L1 5521 5822 -356 392 266 108 0 chr10 15191678 15191817 -125124948 + MER5A DNA MER1_type 3 156 -33 505 222 90 36 chr10 15191817 15191984 -125124781 - MIR SINE MIR -82 180 5 402 197 9 125 chr10 15192849 15193023 -125123742 - MIR3 SINE MIR -17 191 34 771 281 79 34 chr10 15193622 15193975 -125122790 + MER90 LTR ERV1 246 614 0 202 175 50 0 chr10 15194052 15194092 -125122673 + MIR SINE MIR 103 144 -64 947 166 186 0 chr10 15194217 15194416 -125122349 - MER46A DNA MER2_type 0 236 1 276 152 45 15 chr10 15195388 15195454 -125121311 - MLT1L LTR MaLR -350 265 198 222 118 0 0 chr10 15195552 15195586 -125121179 + (CA)n Simple_repeat Simple_repeat 2 35 0 1663 126 66 102 chr10 15195587 15195968 -125120797 + MLT1A2 LTR MaLR 8 374 0 216 0 0 0 chr10 15197917 15197941 -125118824 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1822 83 13 0 chr10 15197953 15198183 -125118582 - AluSx SINE Alu -79 233 1 424 249 46 83 chr10 15199175 15199293 -125117472 + MER112 DNA MER1_type 51 159 -101 1734 141 61 7 chr10 15199293 15199570 -125117195 + AluSx SINE Alu 1 292 -20 424 249 46 83 chr10 15199570 15199668 -125117097 + MER112 DNA MER1_type 159 259 -1 269 220 30 100 chr10 15200589 15200689 -125116076 - MIR SINE MIR -139 123 31 288 0 0 0 chr10 15202633 15202665 -125114100 + (CA)n Simple_repeat Simple_repeat 2 33 0 260 256 52 59 chr10 15203575 15203775 -125112990 + L2 LINE L2 2776 2973 -299 467 286 82 15 chr10 15204385 15204591 -125112174 - MIR SINE MIR -10 252 33 339 272 0 0 chr10 15204927 15205052 -125111713 + (CA)n Simple_repeat Simple_repeat 1 125 0 243 208 0 19 chr10 15205790 15205843 -125110922 - MER5B DNA MER1_type -2 176 125 2161 61 41 41 chr10 15206311 15206606 -125110159 - AluY SINE Alu -16 295 1 688 274 117 6 chr10 15207885 15208235 -125108530 - L2 LINE L2 -3 3310 2922 2264 112 0 3 chr10 15208519 15208823 -125107942 - AluSx SINE Alu -9 303 1 332 228 158 0 chr10 15210017 15210144 -125106621 - L1ME4a LINE L1 0 6121 5975 244 216 167 29 chr10 15210206 15210308 -125106457 - L1ME4a LINE L1 -251 5870 5755 2217 159 39 127 chr10 15210312 15210959 -125105806 + Charlie1 DNA MER1_type 2168 2757 -4 30 27 0 0 chr10 15211270 15211307 -125105458 + AT_rich Low_complexity Low_complexity 1 37 0 880 131 0 0 chr10 15211705 15211827 -125104938 + FLAM_A SINE Alu 1 122 -11 293 185 104 111 chr10 15211869 15212004 -125104761 - L2 LINE L2 0 3313 3180 850 182 79 0 chr10 15212751 15212916 -125103849 + MER45A DNA AcHobo 1 178 0 440 83 17 0 chr10 15213056 15213116 -125103649 + MLT1E LTR MaLR 92 152 -441 1045 251 18 11 chr10 15213172 15213451 -125103314 + MLT1E LTR MaLR 313 593 0 2313 70 0 7 chr10 15213636 15213954 -125102811 + AluY SINE Alu 1 316 0 194 289 105 67 chr10 15214129 15214368 -125102397 - L2 LINE L2 -1926 1388 1141 324 163 0 0 chr10 15214631 15214680 -125102085 - MER81 DNA DNA -36 78 30 183 197 49 16 chr10 15214746 15214807 -125101958 - MER5B DNA MER1_type -3 175 113 220 309 124 14 chr10 15214814 15215096 -125101669 - L2 LINE L2 -2666 648 336 214 262 0 0 chr10 15216160 15216202 -125100563 + (CATG)n Simple_repeat Simple_repeat 3 44 0 336 24 0 0 chr10 15216996 15217037 -125099728 + (TG)n Simple_repeat Simple_repeat 1 41 0 2249 119 0 0 chr10 15217286 15217581 -125099184 + AluSx SINE Alu 1 295 -17 1400 172 92 43 chr10 15217725 15218073 -125098692 - MLT1A1 LTR MaLR 0 365 1 916 165 95 0 chr10 15219346 15219504 -125097261 + FAM SINE Alu 3 175 0 246 171 26 13 chr10 15219506 15219582 -125097183 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 200 27 67 chr10 15219607 15219682 -125097083 + MIR SINE MIR 42 113 -95 1519 128 210 55 chr10 15219948 15220211 -125096554 + MSTD LTR MaLR 1 331 -65 1682 140 37 57 chr10 15220211 15220511 -125096254 + AluSx SINE Alu 1 294 -18 1519 128 210 55 chr10 15220511 15220590 -125096175 + MSTD LTR MaLR 331 396 0 2229 121 3 0 chr10 15221964 15222269 -125094496 - AluSx SINE Alu -6 306 1 233 271 135 0 chr10 15222423 15222519 -125094246 + MER112 DNA MER1_type 6 114 -146 1829 157 32 23 chr10 15222607 15222952 -125093813 + L1MB3 LINE L1 5748 6095 -88 2005 125 0 0 chr10 15223013 15223319 -125093446 + AluSg SINE Alu 1 306 0 1902 140 21 0 chr10 15226522 15226801 -125089964 + AluSx SINE Alu 13 297 -15 2290 96 0 3 chr10 15226844 15227136 -125089629 + AluY SINE Alu 1 291 -20 209 261 8 67 chr10 15228041 15228160 -125088605 - L2 LINE L2 -329 2943 2832 1662 193 0 22 chr10 15228385 15228701 -125088064 + AluJo SINE Alu 1 309 -3 2478 83 0 3 chr10 15229131 15229443 -125087322 - AluY SINE Alu 0 311 1 240 271 271 8 chr10 15229519 15229571 -125087194 - MIR SINE MIR -87 175 138 2249 122 0 3 chr10 15229571 15229883 -125086882 + AluSx SINE Alu 2 312 0 240 271 271 8 chr10 15229883 15229948 -125086817 - MIR SINE MIR -124 138 27 4577 94 8 17 chr10 15231416 15232056 -125084709 + MER51A LTR ERV1 1 634 0 231 319 118 0 chr10 15232596 15232715 -125084050 + MER94 DNA DNA 1 133 -1 1700 173 33 36 chr10 15233164 15233529 -125083236 + MLT1A1 LTR MaLR 2 365 0 268 295 129 0 chr10 15234554 15234693 -125082072 + MIR3 SINE MIR 42 198 -10 2154 120 27 0 chr10 15235666 15235967 -125080798 + AluSx SINE Alu 1 309 -3 1207 107 0 11 chr10 15236412 15236590 -125080175 + L1PA8 LINE L1 5989 6164 -8 408 267 30 15 chr10 15236645 15236776 -125079989 + MIR SINE MIR 81 213 -49 389 306 50 0 chr10 15236819 15236940 -125079825 + MIR3 SINE MIR 41 167 -41 2259 106 0 22 chr10 15237466 15237778 -125078987 + AluSp SINE Alu 1 305 -8 274 258 22 0 chr10 15238316 15238411 -125078354 + L1MC4 LINE L1 7074 7255 -633 529 235 84 67 chr10 15238532 15238817 -125077948 + L1MC5 LINE L1 7287 7576 -385 36 23 0 0 chr10 15239895 15239938 -125076827 + AT_rich Low_complexity Low_complexity 1 43 0 1815 111 67 54 chr10 15240181 15240479 -125076286 + AluSq SINE Alu 1 302 -11 1593 157 60 17 chr10 15240999 15241298 -125075467 + AluJo SINE Alu 1 312 0 200 292 0 0 chr10 15241567 15241615 -125075150 + MIR SINE MIR 215 262 0 513 269 195 21 chr10 15241730 15242012 -125074753 + L1MB7 LINE L1 5843 6173 -11 334 287 52 52 chr10 15242112 15242189 -125074576 + MIR SINE MIR 13 89 -173 1609 103 5 0 chr10 15242189 15242403 -125074362 - AluSg/x SINE Alu -9 303 89 334 287 52 52 chr10 15242403 15242499 -125074266 + MIR SINE MIR 88 186 -76 244 250 45 45 chr10 15242500 15242632 -125074133 + L2 LINE L2 2376 2507 -807 554 241 156 71 chr10 15242800 15243249 -125073516 + L2 LINE L2 2826 3312 -1 252 261 43 22 chr10 15243655 15243747 -125073018 - MIR SINE MIR -87 175 82 2336 97 3 7 chr10 15244433 15244741 -125072024 + AluSx SINE Alu 1 307 -5 1403 226 26 0 chr10 15244750 15245060 -125071705 - L1 LINE L1 -797 5349 5032 1947 199 35 9 chr10 15245060 15245486 -125071279 + L1MB1 LINE L1 5729 6165 -3 182 279 16 0 chr10 15245615 15245676 -125071089 - MIR SINE MIR -124 138 77 892 125 0 0 chr10 15246288 15246408 -125070357 + FLAM_C SINE Alu 1 120 -23 1580 183 3 7 chr10 15247418 15247708 -125069057 - AluJo SINE Alu -23 289 1 760 177 8 0 chr10 15247709 15247833 -125068932 - AluJo/FLAM SINE Alu -186 126 2 197 254 73 0 chr10 15247878 15247933 -125068832 + L2 LINE L2 3209 3267 -5 180 0 0 0 chr10 15248690 15248710 -125068055 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 318 26 0 0 chr10 15249767 15249806 -125066959 + (CA)n Simple_repeat Simple_repeat 1 39 0 442 228 6 11 chr10 15250211 15250391 -125066374 + CT-rich Low_complexity Low_complexity 2 180 0 796 151 78 50 chr10 15251956 15252135 -125064630 + MLT1B LTR MaLR 1 184 -206 200 119 0 48 chr10 15252139 15252181 -125064584 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1083 195 10 5 chr10 15252215 15252415 -125064350 + MLT1B LTR MaLR 188 388 -2 215 288 0 41 chr10 15252949 15253022 -125063743 + L2 LINE L2 3201 3270 -2 987 235 76 90 chr10 15253801 15254355 -125062410 - MLT1H LTR MaLR 0 549 4 2655 192 46 38 chr10 15254651 15255260 -125061505 - MLT1E3 LTR MaLR 0 624 11 2453 86 0 0 chr10 15255529 15255830 -125060935 + AluY SINE Alu 1 301 -10 405 0 0 0 chr10 15256952 15256997 -125059768 + (TA)n Simple_repeat Simple_repeat 2 46 0 609 242 112 51 chr10 15257138 15257353 -125059412 - MLT1E3 LTR MaLR -67 557 330 214 268 16 0 chr10 15257359 15257482 -125059283 + (TA)n Simple_repeat Simple_repeat 1 125 0 289 274 91 16 chr10 15258236 15258422 -125058343 + L1M4 LINE L1 3249 3448 -2698 2156 135 0 6 chr10 15258428 15258739 -125058026 - AluSx SINE Alu -3 309 1 2204 108 0 0 chr10 15259316 15259612 -125057153 + AluSx SINE Alu 1 296 -16 752 236 186 92 chr10 15259718 15259858 -125056907 - L2 LINE L2 -1080 2234 2109 2348 102 0 13 chr10 15259858 15260163 -125056602 + AluSx SINE Alu 1 301 -11 752 236 186 92 chr10 15260163 15260515 -125056250 - L2 LINE L2 -1205 2109 1682 2255 128 0 0 chr10 15260515 15260813 -125055952 + AluSx SINE Alu 2 299 -13 752 236 186 92 chr10 15260813 15260874 -125055891 - L2 LINE L2 -1632 1682 1628 337 325 60 40 chr10 15260922 15261122 -125055643 + L2 LINE L2 2865 3068 -204 24 32 0 0 chr10 15261397 15261428 -125055337 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr10 15261591 15261616 -125055149 + AT_rich Low_complexity Low_complexity 1 25 0 1841 156 20 7 chr10 15262108 15262409 -125054356 + AluJb SINE Alu 1 305 -7 292 336 7 18 chr10 15262409 15262614 -125054151 + GA-rich Low_complexity Low_complexity 1 202 0 474 181 0 0 chr10 15263284 15263367 -125053398 + AluSc SINE Alu 141 223 -86 3191 214 80 38 chr10 15263388 15263917 -125052848 - L1ME1 LINE L1 -6 6160 5655 1550 175 46 117 chr10 15263917 15264022 -125052743 + MLT1C LTR MaLR 1 112 -355 2002 138 7 0 chr10 15264022 15264311 -125052454 + AluSx SINE Alu 1 291 -21 1550 175 46 117 chr10 15264311 15264703 -125052062 + MLT1C LTR MaLR 112 463 -4 3191 214 80 38 chr10 15264703 15265477 -125051288 - L1ME1 LINE L1 -511 5655 4915 2562 65 3 0 chr10 15265477 15265784 -125050981 - AluSc SINE Alu -1 308 1 3191 214 80 38 chr10 15265784 15266001 -125050764 - L1ME1 LINE L1 -1251 4915 4709 2000 64 0 0 chr10 15266001 15266252 -125050513 - L1PA7 LINE L1 -2 6152 5902 3191 214 80 38 chr10 15266252 15266622 -125050143 - L1ME1 LINE L1 -1457 4709 4187 453 307 60 60 chr10 15267588 15267776 -125048989 - L2 LINE L2 -4 3268 3078 2267 78 4 0 chr10 15267776 15268057 -125048708 - AluSg SINE Alu -13 297 16 453 307 60 60 chr10 15268057 15268119 -125048646 - L2 LINE L2 -193 3079 3018 2019 119 4 0 chr10 15269015 15269293 -125047472 + AluSx SINE Alu 7 285 -27 1699 148 4 4 chr10 15269847 15270111 -125046654 + AluSx SINE Alu 29 292 -20 2242 110 7 3 chr10 15270408 15270707 -125046058 + AluSx SINE Alu 1 300 -12 297 75 0 0 chr10 15270715 15270755 -125046010 + (TG)n Simple_repeat Simple_repeat 2 41 0 2225 43 0 0 chr10 15271965 15272219 -125044546 - AluY SINE Alu -8 303 50 1753 164 13 10 chr10 15272957 15273256 -125043509 + AluJo SINE Alu 1 300 -12 2412 85 3 7 chr10 15273578 15273883 -125042882 - AluSq SINE Alu -9 304 1 882 130 0 0 chr10 15274226 15274349 -125042416 + AluJ SINE Alu 11 133 -179 24 0 0 0 chr10 15274553 15274577 -125042188 + AT_rich Low_complexity Low_complexity 1 24 0 737 73 63 21 chr10 15274650 15274987 -125041778 + (TA)n Simple_repeat Simple_repeat 1 351 0 2293 76 3 3 chr10 15274987 15275277 -125041488 - AluY SINE Alu -21 290 1 30 27 0 0 chr10 15275278 15275315 -125041450 + AT_rich Low_complexity Low_complexity 1 37 0 553 168 74 108 chr10 15276019 15276222 -125040543 + AluJo SINE Alu 13 208 -104 731 223 11 40 chr10 15276631 15276806 -125039959 + AluJ SINE Alu 118 287 -25 529 285 24 6 chr10 15277741 15277906 -125038859 - MER45A DNA AcHobo 0 178 11 2263 93 3 26 chr10 15277968 15278281 -125038484 + AluSx SINE Alu 1 306 -6 2396 79 0 3 chr10 15278282 15278586 -125038179 + AluY SINE Alu 2 304 -7 2260 108 14 0 chr10 15278869 15279164 -125037601 + AluSx SINE Alu 1 299 -13 25 31 0 0 chr10 15279484 15279516 -125037249 + AT_rich Low_complexity Low_complexity 1 32 0 2308 89 0 13 chr10 15280067 15280371 -125036394 + AluY SINE Alu 1 300 -11 548 194 144 94 chr10 15280487 15280688 -125036077 + L1ME LINE L1 6 216 -5854 2104 120 7 7 chr10 15280761 15281069 -125035696 + AluSx SINE Alu 1 308 -4 216 158 0 0 chr10 15281069 15281107 -125035658 + GA-rich Low_complexity Low_complexity 1 38 0 567 304 12 41 chr10 15281122 15281365 -125035400 + L1ME LINE L1 260 495 -5575 2215 127 0 0 chr10 15281577 15281884 -125034881 - AluSx SINE Alu -5 307 1 2178 134 0 0 chr10 15282179 15282486 -125034279 - AluSx SINE Alu -5 307 1 219 88 0 0 chr10 15282865 15282899 -125033866 + (GA)n Simple_repeat Simple_repeat 1 34 0 897 163 18 24 chr10 15283090 15283256 -125033509 - MLT1B LTR MaLR -205 185 21 1258 311 92 38 chr10 15283317 15283782 -125032983 - L1MEd LINE L1 -5333 786 265 1993 204 127 54 chr10 15283782 15283907 -125032858 + MLT1E LTR MaLR 1 116 -477 1644 173 10 33 chr10 15283907 15284208 -125032557 + AluJb SINE Alu 1 294 -18 1993 204 127 54 chr10 15284208 15284635 -125032130 + MLT1E LTR MaLR 116 593 0 1258 311 92 38 chr10 15284635 15284911 -125031854 - L1MEd LINE L1 -5854 265 5 1755 174 0 10 chr10 15285465 15285753 -125031012 + AluJb SINE Alu 3 287 -25 248 273 34 68 chr10 15285777 15285865 -125030900 + L2 LINE L2 3005 3089 -183 209 338 137 24 chr10 15286216 15286530 -125030235 + L2 LINE L2 2715 3058 -214 748 277 119 13 chr10 15286625 15286860 -125029905 - MIR SINE MIR -1 261 2 364 257 83 42 chr10 15287225 15287369 -125029396 - MIR3 SINE MIR -10 198 49 1589 180 33 91 chr10 15287975 15288370 -125028395 - MLT1A2 LTR MaLR -2 372 1 3089 230 60 68 chr10 15288376 15289613 -125027152 - MLT1A2-int LTR MaLR -7 1364 5 1393 232 126 69 chr10 15289617 15289965 -125026800 - MLT2B1 LTR ERVL 0 520 134 2149 137 0 0 chr10 15289965 15290264 -125026501 - AluSx SINE Alu -13 299 1 1393 232 126 69 chr10 15290264 15290407 -125026358 - MLT2B1 LTR ERVL -386 134 1 357 221 124 138 chr10 15290757 15290974 -125025791 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15291097 15291214 -125025551 + MIR SINE MIR 32 147 -64 4111 117 35 2 chr10 15292744 15293335 -125023430 - L1PB3 LINE L1 0 6154 5544 2529 77 0 3 chr10 15293336 15293648 -125023117 - AluY SINE Alu 0 311 1 204 98 0 176 chr10 15293719 15293770 -125022995 + L2 LINE L2 3272 3313 0 2174 104 0 0 chr10 15293953 15294259 -125022506 + AluSg SINE Alu 3 308 0 1231 237 125 24 chr10 15294566 15294983 -125021782 - MLT1C LTR MaLR -8 459 1 2175 213 101 9 chr10 15294983 15295658 -125021107 + L1M4 LINE L1 943 1679 -4863 1599 167 11 0 chr10 15295772 15296059 -125020706 + L1 LINE L1 4629 4918 -1228 447 133 4 0 chr10 15296111 15296190 -125020575 - L1P4 LINE L1 -677 5479 5399 640 170 30 10 chr10 15296198 15296350 -125020415 + L1MD3 LINE L1 6857 7041 -793 882 249 4 0 chr10 15296856 15297081 -125019684 + L1M4 LINE L1 3148 3373 -3271 22 0 0 0 chr10 15297873 15297895 -125018870 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 0 chr10 15298811 15298858 -125017907 + MIR3 SINE MIR 147 193 -15 2362 96 0 0 chr10 15298981 15299284 -125017481 + AluSx SINE Alu 1 303 -9 239 163 47 0 chr10 15299364 15299407 -125017358 + L2 LINE L2 3009 3053 -260 22 0 0 0 chr10 15299414 15299436 -125017329 + AT_rich Low_complexity Low_complexity 1 22 0 1562 137 47 8 chr10 15299479 15299735 -125017030 - AluJo SINE Alu -6 306 41 613 162 10 0 chr10 15299835 15299934 -125016831 + MER46A DNA MER2_type 137 236 0 1440 244 150 31 chr10 15300033 15300193 -125016572 + L1M4 LINE L1 2115 2255 -3891 2504 72 0 3 chr10 15300193 15300499 -125016266 + AluY SINE Alu 1 305 -6 1440 244 150 31 chr10 15300499 15301165 -125015600 + L1M4 LINE L1 2255 3039 -3107 288 226 124 138 chr10 15301343 15301560 -125015205 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15301684 15301801 -125014964 + MIR SINE MIR 32 147 -64 2133 108 0 23 chr10 15303092 15303398 -125013367 + AluSx SINE Alu 3 301 -11 226 288 94 100 chr10 15304507 15304677 -125012088 - L2 LINE L2 -5 3267 3099 5377 139 55 6 chr10 15304699 15305554 -125011211 + MER4D LTR ERV1 2 898 -5 252 200 0 0 chr10 15305905 15305960 -125010805 - L1ME4a LINE L1 0 6121 6067 1897 132 24 14 chr10 15305983 15306279 -125010486 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 15306519 15306541 -125010224 + AT_rich Low_complexity Low_complexity 1 22 0 670 236 152 6 chr10 15306654 15306832 -125009933 + LTR16C LTR ERVL 288 491 0 2240 95 14 0 chr10 15307017 15307312 -125009453 + AluSp SINE Alu 1 299 -14 578 309 68 16 chr10 15308103 15308341 -125008424 + MIR SINE MIR 4 242 -20 607 238 84 0 chr10 15309822 15309965 -125006800 - Charlie8 DNA MER1_type -2235 182 28 2203 141 133 8 chr10 15310632 15311016 -125005749 - MSTB1 LTR MaLR 0 432 1 189 0 0 0 chr10 15311112 15311133 -125005632 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 953 61 0 0 chr10 15311133 15311248 -125005517 - AluSg/x SINE Alu -32 280 166 468 242 98 7 chr10 15311310 15311463 -125005302 - LTR16C LTR ERVL -2 489 323 1747 143 7 7 chr10 15313503 15313789 -125002976 - AluJb SINE Alu -10 302 17 190 271 94 0 chr10 15314243 15314328 -125002437 - L2 LINE L2 -1 3312 3220 247 108 27 0 chr10 15314353 15314390 -125002375 - U2 snRNA snRNA -150 38 1 822 264 51 36 chr10 15314432 15314708 -125002057 - L2 LINE L2 -1 3312 3033 1987 112 17 24 chr10 15314852 15315173 -125001592 + AluSx SINE Alu 1 312 0 2087 136 147 5 chr10 15316566 15316933 -124999832 + MSTA LTR MaLR 7 425 -3 2397 166 108 31 chr10 15316945 15317428 -124999337 + MLT2B1 LTR ERVL 1 520 0 227 283 0 0 chr10 15317907 15317953 -124998812 - L2 LINE L2 -82 3190 3145 1511 123 5 9 chr10 15318071 15318290 -124998475 - AluJb SINE Alu -14 298 81 2154 166 35 29 chr10 15318490 15319038 -124997727 + MLT2A2 LTR ERVL 1 554 0 730 78 0 0 chr10 15319097 15319187 -124997578 - 5S rRNA rRNA -31 90 1 234 0 0 0 chr10 15319580 15319606 -124997159 + (A)n Simple_repeat Simple_repeat 1 26 0 2249 148 0 3 chr10 15320079 15320409 -124996356 + MER7A DNA MER2_type 1 327 -19 271 273 0 13 chr10 15320421 15320498 -124996267 + L2 LINE L2 3193 3268 -4 439 308 123 18 chr10 15321719 15321870 -124994895 - L2 LINE L2 -6 3307 3173 2609 112 3 5 chr10 15321870 15322246 -124994519 - THE1C LTR MaLR 0 375 1 439 308 123 18 chr10 15322246 15322370 -124994395 - L2 LINE L2 -140 3173 3003 2132 118 6 19 chr10 15323722 15324035 -124992730 - AluSc SINE Alu 0 309 1 195 225 0 0 chr10 15324367 15324407 -124992358 - L2 LINE L2 -5 3267 3228 1984 142 10 7 chr10 15324778 15325088 -124991677 + AluJb SINE Alu 1 311 -1 3684 103 33 70 chr10 15325099 15325761 -124991004 + L1MA4A LINE L1 5658 6295 -8 202 277 9 62 chr10 15326411 15326523 -124990242 + L3b LINE CR1 1379 1484 -99 675 282 63 66 chr10 15326811 15326919 -124989846 + MLT1K LTR MaLR 116 223 -365 1725 115 77 71 chr10 15326919 15327258 -124989507 - MER61A LTR ERV1 0 343 3 675 282 63 66 chr10 15327258 15327560 -124989205 + MLT1K LTR MaLR 223 525 -63 204 67 0 0 chr10 15327564 15327594 -124989171 + (A)n Simple_repeat Simple_repeat 1 30 0 2222 103 33 0 chr10 15327776 15328078 -124988687 - AluSx SINE Alu 0 312 1 641 176 9 0 chr10 15328226 15328334 -124988431 - MER7A DNA MER2_type -239 107 1 6427 109 33 29 chr10 15328687 15329722 -124987043 - L1MA5 LINE L1 -2 6298 5260 1879 179 6 0 chr10 15329720 15330073 -124986692 + L1MA5 LINE L1 4921 5275 -871 * 949 251 8 47 chr10 15330067 15330302 -124986463 - L1M3de LINE L1 -6071 582 357 * 873 244 65 101 chr10 15330288 15330418 -124986347 - L1M3de LINE L1 -5710 943 810 * 1225 163 178 38 chr10 15330418 15330682 -124986083 - AluJb SINE Alu -1 301 1 873 244 65 101 chr10 15330682 15330930 -124985835 - L1M3de LINE L1 -5843 810 2 315 320 30 44 chr10 15331308 15331511 -124985254 - L1ME LINE L1 -359 5762 5563 1928 170 0 3 chr10 15331566 15331878 -124984887 + AluJb SINE Alu 1 311 -1 1033 256 6 19 chr10 15332531 15332881 -124983884 + LTR16A LTR ERVL 52 440 -10 185 323 11 21 chr10 15332890 15332983 -124983782 - MIR SINE MIR -168 94 3 2575 52 0 0 chr10 15333030 15333336 -124983429 + AluY SINE Alu 1 306 -5 232 254 0 127 chr10 15333338 15333395 -124983370 - MER5B DNA MER1_type -54 124 88 687 182 0 0 chr10 15333395 15333505 -124983260 + MER81 DNA DNA 5 114 0 232 254 0 127 chr10 15333505 15333565 -124983200 - MER5B DNA MER1_type -90 88 22 206 250 0 36 chr10 15333525 15333581 -124983184 + MER5A DNA MER1_type 130 183 -6 * 516 200 77 8 chr10 15333689 15333819 -124982946 - MIR SINE MIR -101 161 23 204 333 75 25 chr10 15334119 15334239 -124982526 - L2 LINE L2 -10 3262 3137 221 182 18 0 chr10 15334299 15334354 -124982411 + CT-rich Low_complexity Low_complexity 3 58 0 210 329 0 14 chr10 15334716 15334786 -124981979 + MIR SINE MIR 20 88 -174 1984 156 0 3 chr10 15334818 15335120 -124981645 - AluJo SINE Alu -10 302 2 3589 71 4 0 chr10 15335342 15335793 -124980972 + MLT2A2 LTR ERVL 1 453 0 2409 94 0 0 chr10 15335982 15336280 -124980485 + AluSx SINE Alu 1 298 -14 590 223 0 36 chr10 15336468 15336607 -124980158 + LTR16A LTR ERVL 259 392 -58 230 318 143 32 chr10 15336836 15336990 -124979775 - MER5A DNA MER1_type -2 187 17 * 311 252 165 8 chr10 15336865 15336992 -124979773 + MER5A DNA MER1_type 43 189 0 230 313 64 73 chr10 15337004 15337346 -124979419 - MLT1K LTR MaLR -115 473 135 2260 125 0 0 chr10 15337937 15338241 -124978524 + AluSx SINE Alu 1 304 -8 2795 74 0 0 chr10 15338241 15338618 -124978147 + L1PA7 LINE L1 5802 6178 0 1792 175 35 38 chr10 15339631 15339860 -124976905 - MLT1A1 LTR MaLR 0 365 136 2262 115 3 3 chr10 15339860 15340172 -124976593 + AluSx SINE Alu 1 312 0 1792 175 35 38 chr10 15340172 15340308 -124976457 - MLT1A1 LTR MaLR -229 136 1 1496 170 42 64 chr10 15340506 15340818 -124975947 - AluJo SINE Alu -7 305 1 2026 150 3 13 chr10 15340828 15341142 -124975623 - AluJo SINE Alu -1 311 1 2083 111 26 88 chr10 15341461 15341797 -124974968 - THE1B LTR MaLR -2 362 51 2280 103 0 13 chr10 15341797 15342099 -124974666 + AluSx SINE Alu 1 298 -14 2083 111 26 88 chr10 15342099 15342148 -124974617 - THE1B LTR MaLR -313 51 1 231 250 0 0 chr10 15343496 15343580 -124973185 + (CA)n Simple_repeat Simple_repeat 1 84 0 2141 153 49 35 chr10 15343587 15344130 -124972635 + MLT2A2 LTR ERVL 1 554 0 183 259 0 0 chr10 15344130 15344188 -124972577 + (CA)n Simple_repeat Simple_repeat 1 58 0 377 257 76 0 chr10 15344699 15344804 -124971961 - L2 LINE L2 -1 3271 3159 1708 171 73 0 chr10 15344809 15345095 -124971670 + AluJb SINE Alu 1 307 -5 1806 156 33 23 chr10 15345370 15345677 -124971088 + AluJb SINE Alu 1 310 -2 309 109 0 0 chr10 15345691 15345737 -124971028 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 506 259 91 49 chr10 15345830 15346128 -124970637 + LTR33 LTR ERVL 97 445 -76 2245 98 3 7 chr10 15346128 15346435 -124970330 - AluSc SINE Alu -3 306 1 506 259 91 49 chr10 15346435 15346516 -124970249 + LTR33 LTR ERVL 445 521 0 855 189 0 7 chr10 15346722 15346875 -124969890 - FRAM SINE Alu -14 152 1 301 263 59 25 chr10 15347153 15347271 -124969494 - MIR SINE MIR -24 238 117 2243 112 3 3 chr10 15347287 15347591 -124969174 + AluSx SINE Alu 1 304 -8 413 217 76 0 chr10 15348283 15348375 -124968390 - MER94 DNA DNA -34 100 2 1201 203 28 80 chr10 15348851 15348873 -124967892 - L1MA9 LINE L1 -38 6274 6252 2296 81 7 7 chr10 15348873 15349169 -124967596 + AluSx SINE Alu 1 296 -16 1201 203 28 80 chr10 15349169 15349536 -124967229 - L1MA9 LINE L1 -60 6252 5905 8812 187 23 17 chr10 15349609 15350071 -124966694 - L1MA9 LINE L1 -366 5946 5488 2241 91 3 3 chr10 15350071 15350356 -124966409 - AluSp SINE Alu -21 292 8 8812 187 23 17 chr10 15350356 15352351 -124964414 - L1MA9 LINE L1 -824 5488 3481 2118 143 0 0 chr10 15353522 15353823 -124962942 + AluSx SINE Alu 1 301 -11 214 384 48 0 chr10 15354203 15354328 -124962437 - MIR SINE MIR -53 209 79 502 120 13 0 chr10 15354502 15354577 -124962188 - MADE1 DNA Mariner -4 76 1 2850 178 13 5 chr10 15354870 15355421 -124961344 - MLT2B1 LTR ERVL 0 554 1 2343 104 0 13 chr10 15355596 15355912 -124960853 - AluSx SINE Alu 0 312 1 234 0 0 0 chr10 15356507 15356533 -124960232 + (A)n Simple_repeat Simple_repeat 1 26 0 2266 115 0 6 chr10 15356911 15357225 -124959540 - AluSx SINE Alu 0 312 1 191 271 112 28 chr10 15357278 15357385 -124959380 - MIR3 SINE MIR -3 205 90 1769 171 26 10 chr10 15358025 15358330 -124958435 - AluSx SINE Alu -2 310 1 1191 190 52 54 chr10 15358515 15358969 -124957796 + LTR29 LTR ERV1 138 644 0 2247 95 6 25 chr10 15358997 15359313 -124957452 - AluSx SINE Alu -2 310 1 333 0 0 0 chr10 15359948 15359985 -124956780 + (TG)n Simple_repeat Simple_repeat 2 38 0 4466 178 9 57 chr10 15360300 15360426 -124956339 + L1MB3 LINE L1 5208 5338 -845 2156 150 0 0 chr10 15360426 15360733 -124956032 + AluSx SINE Alu 1 307 -5 4466 178 9 57 chr10 15360733 15361522 -124955243 + L1MB3 LINE L1 5338 6163 -20 4032 149 12 22 chr10 15361522 15361905 -124954860 + LTR51 LTR ERV1 1 375 -296 1463 161 0 74 chr10 15361905 15362190 -124954575 - AluJo SINE Alu -21 291 28 4032 149 12 22 chr10 15362190 15362484 -124954281 + LTR51 LTR ERV1 375 671 0 4466 178 9 57 chr10 15362484 15362534 -124954231 + L1MB3 LINE L1 6163 6128 -55 2086 106 7 3 chr10 15362534 15362867 -124953898 + AluSg SINE Alu 1 334 0 4466 178 9 57 chr10 15362867 15362911 -124953854 + L1MB3 LINE L1 6127 6172 -11 1947 149 0 10 chr10 15363769 15364065 -124952700 - AluSx SINE Alu -19 293 1 5343 169 24 22 chr10 15364300 15364961 -124951804 + L1MC2 LINE L1 5122 5734 -610 2466 121 5 24 chr10 15364961 15365332 -124951433 - THE1B LTR MaLR 0 364 1 5343 169 24 22 chr10 15365332 15365936 -124950829 + L1MC2 LINE L1 5734 6335 -9 550 146 0 0 chr10 15365992 15366074 -124950691 + FRAM SINE Alu 43 124 -52 384 22 0 0 chr10 15366117 15366162 -124950603 + (CA)n Simple_repeat Simple_repeat 2 46 0 257 152 22 0 chr10 15366167 15366213 -124950552 - MER5B DNA MER1_type -46 132 86 579 241 0 0 chr10 15366213 15366321 -124950444 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4363 119 29 41 chr10 15366313 15366604 -124950161 + Tigger3(Golem) DNA MER2_type 2279 2572 -457 2098 121 7 7 chr10 15366604 15366894 -124949871 - AluSg SINE Alu -20 290 1 4363 119 29 41 chr10 15366894 15367324 -124949441 + Tigger3(Golem) DNA MER2_type 2572 2993 -36 2301 112 0 0 chr10 15367324 15367627 -124949138 - AluSx SINE Alu -9 303 1 4363 119 29 41 chr10 15367627 15367663 -124949102 + Tigger3(Golem) DNA MER2_type 2993 3028 -1 696 138 0 0 chr10 15367853 15367962 -124948803 + L1MA2 LINE L1 6196 6304 0 1986 115 4 11 chr10 15367993 15368272 -124948493 + AluSx SINE Alu 1 277 -35 202 182 0 0 chr10 15368295 15368328 -124948437 + polypurine Low_complexity Low_complexity 2 34 0 283 196 0 0 chr10 15368880 15368936 -124947829 + L1ME LINE L1 5579 5634 -487 248 198 10 104 chr10 15369372 15369468 -124947297 + L1ME LINE L1 5656 5742 -420 3255 134 2 2 chr10 15369405 15369890 -124946875 + L1PA15 LINE L1 5679 6163 -2 431 282 103 34 chr10 15370584 15371105 -124945660 + HAL1 LINE L1 619 1200 -1307 291 216 0 0 chr10 15371119 15371169 -124945596 - MLT1F1 LTR MaLR 0 542 493 2476 212 38 22 chr10 15371169 15371669 -124945096 + MLT2B3 LTR ERVL 1 508 -46 1686 199 145 8 chr10 15371883 15372269 -124944496 - MLT1F1 LTR MaLR -47 520 82 216 218 146 0 chr10 15372393 15372448 -124944317 + MIR SINE MIR 89 151 -111 2109 109 7 13 chr10 15372498 15372802 -124943963 + AluSx SINE Alu 2 303 -9 1853 215 42 75 chr10 15372955 15373528 -124943237 - MLT2B3 LTR ERVL 0 554 1 2065 98 17 48 chr10 15373738 15374033 -124942732 + AluSx SINE Alu 3 288 -24 402 188 9 40 chr10 15374033 15374261 -124942504 + GA-rich Low_complexity Low_complexity 1 221 0 228 236 59 71 chr10 15374596 15374735 -124942030 - MIR SINE MIR -67 141 42 681 233 112 8 chr10 15375231 15375668 -124941097 + LTR33A LTR ERVL 1 519 -4 476 265 45 23 chr10 15375711 15375843 -124940922 + MIR3 SINE MIR 33 167 -41 2281 111 0 0 chr10 15375951 15376248 -124940517 - AluSx SINE Alu -15 297 1 7411 47 2 0 chr10 15376539 15377711 -124939054 - L1PA6 LINE L1 0 6154 4983 2020 192 15 5 chr10 15377764 15378159 -124938606 - L1MB7 LINE L1 -54 6130 5732 * 2250 179 32 6 chr10 15378154 15378728 -124938037 - L1MB7 LINE L1 -661 5517 4935 251 35 0 0 chr10 15379714 15379743 -124937022 + LTR6A LTR ERV1 73 101 -463 1233 208 50 13 chr10 15379898 15380216 -124936549 - L1M4 LINE L1 -1094 5052 4723 1461 197 7 124 chr10 15381100 15381512 -124935253 - MLT1A2 LTR MaLR 0 374 11 1354 105 0 0 chr10 15381517 15381688 -124935077 - AluSg/x SINE Alu -8 304 134 2342 100 3 0 chr10 15381688 15381988 -124934777 - AluSq SINE Alu -12 301 1 4007 103 2 0 chr10 15382455 15382981 -124933784 - MER1A DNA MER1_type 0 527 1 1319 260 60 16 chr10 15383081 15383446 -124933319 + LTR16C LTR ERVL 36 416 -75 189 0 0 0 chr10 15384026 15384047 -124932718 + (TG)n Simple_repeat Simple_repeat 1 21 0 1493 221 0 20 chr10 15384693 15384991 -124931774 - AluJo SINE Alu -17 295 4 331 203 0 0 chr10 15385002 15385071 -124931694 - MIR SINE MIR -108 154 86 249 322 44 0 chr10 15385087 15385177 -124931588 - L2 LINE L2 -17 3296 3203 539 185 42 111 chr10 15385290 15385349 -124931416 - MER5B DNA MER1_type -2 176 115 4589 56 0 0 chr10 15385349 15385904 -124930861 + L1PA8 LINE L1 5608 6162 -10 539 185 42 111 chr10 15385904 15386033 -124930732 - MER5B DNA MER1_type -63 115 1 399 335 118 20 chr10 15386292 15386442 -124930323 - L2 LINE L2 -562 2752 2618 655 171 9 0 chr10 15386442 15386553 -124930212 - MER81 DNA DNA 0 114 3 399 335 118 20 chr10 15386553 15386793 -124929972 - L2 LINE L2 -696 2618 2324 274 235 147 59 chr10 15386848 15386950 -124929815 - L2 LINE L2 -18 3254 3144 2213 116 0 0 chr10 15386975 15387267 -124929498 + AluSx SINE Alu 1 292 -20 2024 163 42 0 chr10 15387319 15387650 -124929115 + MER7A DNA MER2_type 1 343 -3 331 346 8 0 chr10 15387702 15387829 -124928936 - MER94 DNA DNA -3 131 4 316 79 22 93 chr10 15388494 15388633 -124928132 + (TTATA)n Simple_repeat Simple_repeat 1 129 0 234 243 40 20 chr10 15388670 15388822 -124927943 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 462 284 65 14 chr10 15389344 15389532 -124927233 - MIR SINE MIR -64 198 4 1656 113 4 9 chr10 15390072 15390303 -124926462 - MER30 DNA MER1_type 0 230 1 534 108 24 0 chr10 15390439 15390522 -124926243 - AluY SINE Alu -11 300 216 1447 115 42 0 chr10 15390877 15391094 -124925671 - MER30 DNA MER1_type 0 230 5 204 262 119 32 chr10 15391874 15392000 -124924765 - MIR3 SINE MIR -25 183 47 253 274 16 0 chr10 15392944 15393006 -124923759 + GA-rich Low_complexity Low_complexity 4 66 0 1605 168 33 4 chr10 15393035 15393348 -124923417 + AluSx SINE Alu 1 321 0 312 27 0 0 chr10 15393459 15393496 -124923269 + (TC)n Simple_repeat Simple_repeat 1 37 0 324 321 23 59 chr10 15393705 15393926 -124922839 - MIR SINE MIR -20 242 30 607 261 145 48 chr10 15394533 15394947 -124921818 - MLT1H LTR MaLR -13 536 83 726 226 97 196 chr10 15395129 15395312 -124921453 + MLT1K LTR MaLR 14 213 -375 234 91 0 0 chr10 15395312 15395345 -124921420 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 726 226 97 196 chr10 15395345 15395633 -124921132 + MLT1K LTR MaLR 213 410 -178 4751 141 41 15 chr10 15395633 15396493 -124920272 + L1MC2 LINE L1 5462 6343 -1 726 226 97 196 chr10 15396493 15396648 -124920117 + MLT1K LTR MaLR 410 579 -9 2267 54 50 30 chr10 15397411 15397709 -124919056 - AluY SINE Alu -7 304 1 1919 153 0 19 chr10 15397799 15398113 -124918652 - AluJo SINE Alu -4 308 1 206 310 100 10 chr10 15398171 15398271 -124918494 + L2 LINE L2 3198 3306 -7 201 343 143 13 chr10 15398444 15398759 -124918006 + L2 LINE L2 1728 2083 -1231 25219 153 33 19 chr10 15398760 15403180 -124913585 - L1P4 LINE L1 -709 5459 974 189 74 0 0 chr10 15403180 15403207 -124913558 + (TTG)n Simple_repeat Simple_repeat 1 27 0 25219 153 33 19 chr10 15403207 15403513 -124913252 - L1P4 LINE L1 -5194 974 674 417 355 160 3 chr10 15403677 15403959 -124912806 + L2 LINE L2 2947 3272 0 545 247 96 83 chr10 15404018 15404509 -124912256 + LTR67 LTR ERVL 2 556 -1 2270 102 3 0 chr10 15406025 15406319 -124910446 + AluSx SINE Alu 1 295 -17 804 195 34 13 chr10 15406370 15406519 -124910246 + AluJo SINE Alu 12 163 -149 888 193 6 6 chr10 15407195 15407361 -124909404 - FRAM SINE Alu -10 166 1 1970 146 3 3 chr10 15408344 15408639 -124908126 + AluJo SINE Alu 1 295 -17 347 246 9 18 chr10 15408845 15408959 -124907806 + (CA)n Simple_repeat Simple_repeat 2 114 0 2188 125 7 0 chr10 15409627 15409932 -124906833 - AluSx SINE Alu -5 307 1 369 255 108 40 chr10 15410206 15410457 -124906308 + MLT1K LTR MaLR 290 557 -31 1296 96 12 0 chr10 15411014 15411180 -124905585 + AluSq SINE Alu 62 229 -84 207 100 0 0 chr10 15411190 15411220 -124905545 + (A)n Simple_repeat Simple_repeat 1 30 0 235 261 75 60 chr10 15411507 15411641 -124905124 - MIR3 SINE MIR -37 171 36 423 345 7 0 chr10 15411668 15411816 -124904949 + L2 LINE L2 3123 3271 -1 1345 167 56 0 chr10 15411980 15412214 -124904551 + MLT2C1 LTR ERVL 1 247 -150 4667 91 25 5 chr10 15412216 15412862 -124903903 + L1PA13 LINE L1 5502 6160 -3 547 250 66 7 chr10 15413025 15413161 -124903604 + MLT2C1 LTR ERVL 234 377 -20 186 43 0 0 chr10 15413587 15413610 -124903155 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 458 265 24 36 chr10 15414098 15414264 -124902501 + MER5B DNA MER1_type 1 164 -14 761 169 50 12 chr10 15414425 15414585 -124902180 + FRAM SINE Alu 1 166 0 2269 81 7 3 chr10 15414588 15414920 -124901845 + AluSp SINE Alu 1 333 0 431 305 20 33 chr10 15415202 15415353 -124901412 + L2 LINE L2 3123 3271 -1 2013 155 0 0 chr10 15415403 15415707 -124901058 - AluSq SINE Alu -9 304 1 2100 92 0 0 chr10 15416473 15416733 -124900032 + AluSx SINE Alu 50 309 -3 2039 127 13 3 chr10 15417291 15417591 -124899174 - AluSx SINE Alu -9 303 1 436 307 40 0 chr10 15417774 15417924 -124898841 - MLT1L LTR MaLR -132 483 328 1718 122 0 4 chr10 15418203 15418441 -124898324 + AluSx SINE Alu 43 279 -33 432 0 0 0 chr10 15418441 15418489 -124898276 + (CA)n Simple_repeat Simple_repeat 1 48 0 2058 117 7 0 chr10 15418667 15418957 -124897808 + AluSx SINE Alu 1 292 -20 445 210 83 38 chr10 15422169 15422326 -124894439 - L2 LINE L2 -456 2858 2695 6410 206 42 17 chr10 15422422 15422702 -124894063 + L1 LINE L1 3423 3695 -2451 216 97 0 0 chr10 15422702 15422733 -124894032 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 507 17 0 0 chr10 15422732 15422792 -124893973 + (GA)n Simple_repeat Simple_repeat 2 61 0 6410 206 42 17 chr10 15422733 15422792 -124893973 + L1 LINE L1 3695 3751 -2395 1919 115 11 0 chr10 15422792 15423062 -124893703 - AluSx SINE Alu -39 273 1 6410 206 42 17 chr10 15423062 15424268 -124892497 + L1 LINE L1 3747 4948 -1194 565 171 0 0 chr10 15424268 15424373 -124892392 + L1MB3 LINE L1 6075 6179 -4 2128 118 0 10 chr10 15425050 15425356 -124891409 - AluSg SINE Alu -7 303 1 2304 113 0 0 chr10 15425913 15426222 -124890543 + AluSg SINE Alu 1 309 -1 283 304 80 0 chr10 15426241 15426366 -124890399 - MER104 DNA Tc2 -4 176 42 279 0 0 0 chr10 15426646 15426677 -124890088 + (A)n Simple_repeat Simple_repeat 1 31 0 1385 152 76 0 chr10 15427020 15427283 -124889482 + L1MA4 LINE L1 6012 6294 -6 26 30 0 0 chr10 15427290 15427323 -124889442 + AT_rich Low_complexity Low_complexity 1 33 0 697 203 15 0 chr10 15427350 15427483 -124889282 - AluJo SINE Alu -176 136 2 511 294 0 75 chr10 15427587 15427742 -124889023 + MIR SINE MIR 10 140 -122 2153 110 3 0 chr10 15427742 15428034 -124888731 + AluY SINE Alu 1 293 -18 511 294 0 75 chr10 15428034 15428130 -124888635 + MIR SINE MIR 140 242 -20 210 71 0 0 chr10 15432246 15432274 -124884491 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 675 213 100 30 chr10 15432566 15432796 -124883969 - MIR SINE MIR -15 247 2 5597 56 1 0 chr10 15432901 15433581 -124883184 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15433592 15433700 -124883065 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15433719 15433994 -124882771 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15434053 15434081 -124882684 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15434180 15434203 -124882562 + AT_rich Low_complexity Low_complexity 1 23 0 2340 168 31 87 chr10 15434245 15434787 -124881978 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15434787 15434864 -124881901 + MER41B LTR ERV1 9 85 -550 585 300 112 58 chr10 15435455 15435657 -124881108 + MLT1K LTR MaLR 24 214 -374 2154 118 11 0 chr10 15435657 15435944 -124880821 + AluSg SINE Alu 1 290 -20 585 300 112 58 chr10 15435944 15436277 -124880488 + MLT1K LTR MaLR 214 588 0 382 218 81 16 chr10 15436562 15436686 -124880079 + HAL1 LINE L1 2204 2335 -172 333 281 71 42 chr10 15436699 15436937 -124879828 + HAL1 LINE L1 2257 2501 -6 249 240 13 27 chr10 15437166 15437241 -124879524 + HAL1 LINE L1 2421 2494 -13 2218 107 3 3 chr10 15438046 15438346 -124878419 + AluSx SINE Alu 1 300 -12 1676 228 119 46 chr10 15438662 15438942 -124877823 - L1MC4 LINE L1 -3 8039 7781 1678 179 10 3 chr10 15438942 15439232 -124877533 - AluJo SINE Alu -18 294 3 1676 228 119 46 chr10 15439232 15439641 -124877124 - L1MC4 LINE L1 -261 7781 7300 203 152 0 0 chr10 15442774 15442807 -124873958 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 675 213 100 30 chr10 15443094 15443324 -124873441 - MIR SINE MIR -15 247 2 5580 57 1 0 chr10 15443429 15444109 -124872656 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15444120 15444228 -124872537 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15444247 15444522 -124872243 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15444581 15444609 -124872156 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15444708 15444731 -124872034 + AT_rich Low_complexity Low_complexity 1 23 0 2329 170 31 87 chr10 15444773 15445315 -124871450 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15445315 15445392 -124871373 + MER41B LTR ERV1 9 85 -550 597 300 112 58 chr10 15445983 15446185 -124870580 + MLT1K LTR MaLR 24 214 -374 2177 115 10 0 chr10 15446185 15446473 -124870292 + AluSg SINE Alu 1 291 -19 597 300 112 58 chr10 15446473 15446806 -124869959 + MLT1K LTR MaLR 214 588 0 362 226 81 16 chr10 15447091 15447215 -124869550 + HAL1 LINE L1 2204 2335 -172 319 284 67 42 chr10 15447228 15447467 -124869298 + HAL1 LINE L1 2257 2501 -6 260 257 46 46 chr10 15447662 15447771 -124868994 + HAL1 LINE L1 2386 2494 -13 2391 60 0 60 chr10 15448576 15448895 -124867870 + AluY SINE Alu 1 300 -11 1367 195 164 0 chr10 15449306 15449604 -124867161 + MER7A DNA MER2_type 1 345 -1 2379 96 3 0 chr10 15449663 15449964 -124866801 - AluSx SINE Alu -10 302 1 2242 114 6 13 chr10 15450309 15450624 -124866141 - AluSq SINE Alu 0 313 1 294 196 120 68 chr10 15451388 15451521 -124865244 + HAL1 LINE L1 58 197 -2310 1745 157 14 17 chr10 15451901 15452194 -124864571 - AluJb SINE Alu -5 307 16 1246 183 100 95 chr10 15452203 15452444 -124864321 + L1MD3 LINE L1 6746 6991 -1004 2053 145 0 0 chr10 15452444 15452733 -124864032 + AluSx SINE Alu 1 289 -23 1246 183 100 95 chr10 15452733 15452901 -124863864 + L1MD3 LINE L1 6991 7157 -838 1299 243 122 32 chr10 15453025 15453494 -124863271 - LTR33 LTR ERVL -1 520 10 787 227 0 0 chr10 15453954 15454117 -124862648 - FRAM SINE Alu -10 166 4 361 331 8 8 chr10 15454445 15454572 -124862193 + MIR SINE MIR 21 147 -61 213 273 0 136 chr10 15455478 15455568 -124861197 - L2 LINE L2 -226 3046 2984 2230 126 30 30 chr10 15455568 15455932 -124860833 - THE1B LTR MaLR 0 364 1 213 273 0 136 chr10 15455932 15455995 -124860770 - L2 LINE L2 -288 2984 2914 1369 179 44 44 chr10 15456573 15456869 -124859896 + AluJb SINE Alu 1 296 -16 1541 221 60 12 chr10 15456870 15457272 -124859493 - L1ME1 LINE L1 -15 6151 5731 * 1741 183 20 17 chr10 15457269 15457625 -124859140 - L1ME1 LINE L1 -1200 4946 4590 1158 260 66 55 chr10 15457693 15458033 -124858732 - MER74B LTR ERVL -83 539 191 2120 125 3 10 chr10 15458033 15458328 -124858437 + AluSx SINE Alu 1 293 -19 1158 260 66 55 chr10 15458328 15458456 -124858309 - MER74B LTR ERVL -431 191 66 795 189 63 17 chr10 15458512 15458687 -124858078 + MLT1D LTR MaLR 9 191 -314 2375 95 3 0 chr10 15458747 15459051 -124857714 + AluSp SINE Alu 1 305 -8 2732 20 0 0 chr10 15459150 15459447 -124857318 + AluYa5 SINE Alu 1 297 -14 10636 27 1 0 chr10 15459572 15461575 -124855190 + L1PA4 LINE L1 4151 6153 -2 21 71 0 0 chr10 15461879 15461921 -124854844 + AT_rich Low_complexity Low_complexity 1 42 0 708 188 61 1 chr10 15461961 15462121 -124854644 + MLT1A1 LTR MaLR 214 365 0 321 151 0 0 chr10 15462309 15462362 -124854403 - Alu SINE Alu 0 301 249 269 64 5 101 chr10 15463127 15463218 -124853547 - Alu SINE Alu -250 52 1 2356 93 0 3 chr10 15463282 15463583 -124853182 + AluSg SINE Alu 1 300 -10 2547 47 7 0 chr10 15463874 15464173 -124852592 + AluY SINE Alu 1 301 -10 2176 115 10 0 chr10 15464750 15465045 -124851720 - AluSx SINE Alu -14 298 1 435 344 26 10 chr10 15465145 15465340 -124851425 + MIR SINE MIR 50 247 -15 3616 163 18 70 chr10 15465705 15466471 -124850294 + L1PB3 LINE L1 5421 6146 -8 2023 129 23 3 chr10 15466788 15467090 -124849675 - AluSq SINE Alu -5 308 1 251 158 0 0 chr10 15467564 15467602 -124849163 - U2 snRNA snRNA -150 38 1 186 133 0 0 chr10 15467609 15467639 -124849126 + (CATATA)n Simple_repeat Simple_repeat 2 31 0 1929 137 14 0 chr10 15467639 15467931 -124848834 - AluJo SINE Alu -16 296 1 5159 198 75 71 chr10 15467940 15468295 -124848470 - L1MC4 LINE L1 -1 8041 7689 866 148 0 15 chr10 15468295 15468430 -124848335 - FLAM_C SINE Alu 0 133 1 5159 198 75 71 chr10 15468430 15468719 -124848046 - L1MC4 LINE L1 -353 7689 7402 2214 84 3 11 chr10 15468719 15469025 -124847740 + AluSg SINE Alu 1 304 0 5159 198 75 71 chr10 15469025 15469946 -124846819 - L1MC4 LINE L1 -640 7402 6469 232 337 24 0 chr10 15470137 15470220 -124846545 + MIR SINE MIR 32 116 -146 227 241 48 72 chr10 15470498 15470581 -124846184 + MIR SINE MIR 117 197 -65 1122 166 111 70 chr10 15470728 15470999 -124845766 + AluJo SINE Alu 24 305 -7 258 286 0 31 chr10 15471006 15471104 -124845661 - L1ME4a LINE L1 -66 6055 5961 325 281 55 20 chr10 15472204 15472350 -124844415 - L2 LINE L2 -1808 1506 1356 721 206 0 14 chr10 15472352 15472498 -124844267 + FRAM SINE Alu 27 170 -6 1286 262 171 19 chr10 15472721 15473470 -124843295 + L2 LINE L2 972 1834 -1480 1581 157 29 32 chr10 15473491 15473804 -124842961 - AluJo SINE Alu 0 312 1 4438 173 44 9 chr10 15474188 15475415 -124841350 - L1MB1 LINE L1 -124 6044 4765 2232 124 0 3 chr10 15475415 15475713 -124841052 - AluSx SINE Alu -15 297 1 4438 173 44 9 chr10 15475713 15475970 -124840795 - L1MB1 LINE L1 -1403 4765 4518 1942 143 0 10 chr10 15476448 15476741 -124840024 - AluJb SINE Alu -22 290 1 2176 121 0 7 chr10 15476762 15477069 -124839696 - AluSx SINE Alu -7 305 1 2222 110 19 50 chr10 15477221 15477638 -124839127 + MER11C LTR ERVK 668 1071 0 988 206 149 36 chr10 15477638 15477973 -124838792 + L1ME2 LINE L1 5674 6046 -118 2084 110 3 16 chr10 15478998 15479306 -124837459 + AluSx SINE Alu 1 304 -8 374 147 54 12 chr10 15479638 15479753 -124837012 - Alu SINE Alu -8 293 228 282 294 4 35 chr10 15480130 15480264 -124836501 + CT-rich Low_complexity Low_complexity 1 129 0 638 99 0 22 chr10 15480556 15480647 -124836118 + AluJb SINE Alu 200 288 -24 22 70 0 0 chr10 15481174 15481217 -124835548 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 15481273 15481301 -124835464 + GC_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 15481442 15481472 -124835293 + GC_rich Low_complexity Low_complexity 1 30 0 1019 156 72 0 chr10 15481961 15482141 -124834624 + AluSg/x SINE Alu 108 300 -12 1008 238 14 5 chr10 15482640 15482850 -124833915 + MER58A DNA MER1_type 3 214 -10 373 295 32 32 chr10 15482913 15483069 -124833696 + L2 LINE L2 3158 3313 0 301 205 256 0 chr10 15483797 15483875 -124832890 - AluJ/FLAM SINE Alu -204 98 1 969 228 112 0 chr10 15483879 15484120 -124832645 - Charlie1b DNA MER1_type -255 268 1 205 289 79 0 chr10 15484345 15484421 -124832344 - L2 LINE L2 -266 3047 2966 459 227 16 23 chr10 15484464 15484592 -124832173 + L2 LINE L2 3167 3293 -20 583 255 89 46 chr10 15484733 15485035 -124831730 - L2 LINE L2 -945 2369 2055 7423 36 11 0 chr10 15486130 15487742 -124829023 + L1PA5 LINE L1 4520 6146 -8 23 0 0 0 chr10 15487742 15487765 -124829000 + AT_rich Low_complexity Low_complexity 1 23 0 1061 141 0 65 chr10 15487832 15488017 -124828748 - FRAM SINE Alu -10 166 1 470 299 12 102 chr10 15488023 15488267 -124828498 - MLT1B LTR MaLR -90 300 79 28 0 0 0 chr10 15488865 15488893 -124827872 + AT_rich Low_complexity Low_complexity 1 28 0 232 269 76 35 chr10 15488900 15489097 -124827668 + L1M4 LINE L1 3775 3979 -2167 1687 122 8 16 chr10 15489098 15489343 -124827422 + AluJb SINE Alu 1 243 -69 1538 128 92 29 chr10 15489482 15489716 -124827049 + MSTA LTR MaLR 139 394 -34 2254 109 3 0 chr10 15489716 15490018 -124826747 - AluSx SINE Alu -9 303 1 1538 128 92 29 chr10 15490018 15490056 -124826709 + MSTA LTR MaLR 394 428 0 593 97 0 43 chr10 15490057 15490150 -124826615 - MER2 DNA MER2_type -162 183 95 1010 125 26 0 chr10 15491027 15491179 -124825586 + AluSg/x SINE Alu 140 295 -17 477 138 30 22 chr10 15491741 15491844 -124824921 - L1P5 LINE L1 -396 5758 5652 198 71 0 0 chr10 15491845 15491873 -124824892 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2135 133 3 0 chr10 15491878 15492180 -124824585 + AluSx SINE Alu 4 306 -6 2120 129 7 7 chr10 15492394 15492703 -124824062 + AluSx SINE Alu 1 309 -3 1825 186 0 0 chr10 15493034 15493340 -124823425 - AluJo SINE Alu -5 307 2 532 189 83 8 chr10 15493400 15493532 -124823233 - L1ME3 LINE L1 -1 6161 6020 403 175 0 0 chr10 15494769 15494832 -124821933 - MER2 DNA MER2_type -4 341 279 2498 77 0 6 chr10 15494878 15495191 -124821574 + AluY SINE Alu 1 311 0 2178 77 14 3 chr10 15495226 15495511 -124821254 + AluY SINE Alu 1 288 -23 430 243 14 64 chr10 15495556 15495830 -124820935 + MER46C DNA MER2_type 6 338 0 1976 103 7 4 chr10 15495889 15496160 -124820605 - AluSx SINE Alu -40 272 1 584 198 60 82 chr10 15496360 15496542 -124820223 - MER5B DNA MER1_type 0 178 1 2425 87 55 63 chr10 15497425 15497792 -124818973 + MER51A LTR ERV1 1 364 -270 251 82 82 61 chr10 15497944 15497993 -124818772 + MLT1J LTR MaLR 393 442 -69 2611 144 13 27 chr10 15498074 15498371 -124818394 + MER65A LTR ERV1 1 291 -154 2077 114 0 29 chr10 15498371 15498677 -124818088 - AluSx SINE Alu -15 297 1 2611 144 13 27 chr10 15498677 15498830 -124817935 + MER65A LTR ERV1 291 445 0 474 206 10 0 chr10 15498888 15498990 -124817775 + MER5A DNA MER1_type 9 111 -78 2366 111 5 37 chr10 15499045 15499424 -124817341 - L1PB3 LINE L1 -1 6153 5787 2242 94 0 13 chr10 15499455 15499764 -124817001 - AluY SINE Alu -6 305 1 611 126 0 1 chr10 15500225 15500609 -124816156 + AluSx SINE Alu 1 430 0 207 0 0 0 chr10 15500612 15500635 -124816130 + (CAG)n Simple_repeat Simple_repeat 3 25 0 741 165 0 0 chr10 15500635 15500884 -124815881 + GA-rich Low_complexity Low_complexity 1 249 0 716 116 0 23 chr10 15500892 15501064 -124815701 + (GAA)n Simple_repeat Simple_repeat 3 170 0 579 266 133 14 chr10 15501180 15501398 -124815367 - MIR SINE MIR -17 245 2 1677 132 20 66 chr10 15501448 15501751 -124815014 + AluJb SINE Alu 1 289 -23 30 59 0 0 chr10 15501961 15502012 -124814753 + AT_rich Low_complexity Low_complexity 1 51 0 2079 143 3 0 chr10 15502125 15502425 -124814340 + AluSx SINE Alu 1 301 -11 2133 122 3 3 chr10 15502881 15503177 -124813588 + AluSc SINE Alu 1 296 -13 21 0 0 0 chr10 15504284 15504305 -124812460 + AT_rich Low_complexity Low_complexity 1 21 0 2256 89 7 10 chr10 15507228 15507530 -124809235 - AluSq SINE Alu -12 301 1 4347 149 57 34 chr10 15507705 15507788 -124808977 - L1MB8 LINE L1 0 6178 6098 2510 81 0 0 chr10 15507788 15508096 -124808669 + AluSx SINE Alu 3 310 -2 4347 149 57 34 chr10 15508096 15508982 -124807783 - L1MB8 LINE L1 -80 6098 5190 597 301 27 0 chr10 15509120 15509303 -124807462 + MIR SINE MIR 31 218 -44 2086 80 33 23 chr10 15510502 15510802 -124805963 + AluSx SINE Alu 1 303 -9 36 53 0 0 chr10 15511225 15511282 -124805483 + AT_rich Low_complexity Low_complexity 1 57 0 322 220 25 85 chr10 15512018 15512136 -124804629 - MIR SINE MIR -46 216 106 833 174 21 47 chr10 15512594 15512784 -124803981 - L1MD1 LINE L1 0 6242 6058 463 176 146 67 chr10 15515337 15515502 -124801263 + MIR SINE MIR 39 216 -46 23 0 0 0 chr10 15515918 15515941 -124800824 + AT_rich Low_complexity Low_complexity 1 23 0 412 191 0 0 chr10 15516794 15516878 -124799887 - AluS SINE Alu -1 308 225 268 95 0 0 chr10 15516978 15517017 -124799748 - Alu SINE Alu -267 35 1 194 233 27 68 chr10 15517020 15517093 -124799672 + MIR3 SINE MIR 118 187 -21 207 0 0 0 chr10 15517376 15517399 -124799366 + (TAGG)n Simple_repeat Simple_repeat 1 23 0 395 290 7 39 chr10 15517712 15517867 -124798898 + MIR SINE MIR 63 212 -50 304 311 47 9 chr10 15518588 15518694 -124798071 + MIR3 SINE MIR 4 113 -95 228 265 170 41 chr10 15519075 15519222 -124797543 + MIR SINE MIR 47 212 -50 27 62 0 0 chr10 15519893 15519941 -124796824 + AT_rich Low_complexity Low_complexity 1 48 0 207 393 28 14 chr10 15520142 15520287 -124796478 + MIR3 SINE MIR 16 162 -46 1916 136 13 30 chr10 15521136 15521437 -124795328 + AluSx SINE Alu 1 296 -16 215 375 77 0 chr10 15521858 15521962 -124794803 - L2 LINE L2 -5 3267 3156 336 374 56 17 chr10 15523312 15523491 -124793274 + MIR3 SINE MIR 10 195 -13 685 176 52 0 chr10 15525383 15525519 -124791246 - MER3 DNA MER1_type 0 209 67 195 114 0 0 chr10 15526396 15526431 -124790334 + (TG)n Simple_repeat Simple_repeat 2 36 0 803 200 59 106 chr10 15526793 15527048 -124789717 - MIR SINE MIR -18 244 2 1774 170 13 3 chr10 15527174 15527474 -124789291 + AluJb SINE Alu 1 303 -9 595 324 115 34 chr10 15527613 15528239 -124788526 - L1MC4a LINE L1 -1878 5930 5254 638 254 20 46 chr10 15529335 15529532 -124787233 - MIR SINE MIR -51 211 20 376 339 138 43 chr10 15529596 15529944 -124786821 - HAL1 LINE L1 -1837 670 290 243 271 46 80 chr10 15530009 15530160 -124786605 - HAL1 LINE L1 -2341 166 21 323 261 328 5 chr10 15530198 15530393 -124786372 - L1ME LINE L1 -303 5818 5561 360 294 206 23 chr10 15530477 15530831 -124785934 - L1ME LINE L1 -1496 4650 4232 1177 268 144 30 chr10 15530848 15531849 -124784916 - L2 LINE L2 0 3313 1726 1505 154 61 0 chr10 15531962 15532208 -124784557 - AluJo SINE Alu -51 261 1 2309 92 0 0 chr10 15532329 15532624 -124784141 + AluSc SINE Alu 1 295 -14 502 108 48 0 chr10 15532628 15532711 -124784054 - AluSg/x SINE Alu -14 295 209 225 0 0 0 chr10 15535019 15535044 -124781721 + (CA)n Simple_repeat Simple_repeat 1 25 0 1815 71 4 0 chr10 15535359 15535584 -124781181 - AluY SINE Alu -7 304 79 357 82 0 0 chr10 15535714 15535763 -124781002 + (TG)n Simple_repeat Simple_repeat 2 50 0 2176 119 7 7 chr10 15535791 15536093 -124780672 - AluSx SINE Alu -10 302 1 232 206 135 76 chr10 15536416 15536558 -124780207 - MIR SINE MIR -28 180 35 283 114 0 0 chr10 15539036 15539080 -124777685 + Alu SINE Alu 253 296 -6 813 191 198 0 chr10 15539371 15539533 -124777232 + AluJo SINE Alu 1 194 -118 483 308 49 51 chr10 15539598 15539662 -124777103 - L1MEd LINE L1 -5284 835 772 2057 125 23 3 chr10 15539662 15539965 -124776800 - AluSx SINE Alu -3 309 1 483 308 49 51 chr10 15539965 15540290 -124776475 - L1MEd LINE L1 -5347 772 447 385 360 16 45 chr10 15540396 15540606 -124776159 - L1MEd LINE L1 -5305 814 618 2447 97 0 0 chr10 15540606 15540917 -124775848 + AluSq SINE Alu 1 311 -2 385 360 16 45 chr10 15540917 15541087 -124775678 - L1MEd LINE L1 -5501 618 445 521 164 16 16 chr10 15541505 15541625 -124775140 + (TA)n Simple_repeat Simple_repeat 2 124 -5 2103 110 0 10 chr10 15541625 15541916 -124774849 - AluSc SINE Alu -21 288 1 521 164 16 16 chr10 15541916 15541923 -124774842 + (TA)n Simple_repeat Simple_repeat 123 129 0 2051 270 74 28 chr10 15541976 15542888 -124773877 - L2 LINE L2 0 3313 2358 2252 118 3 6 chr10 15542888 15543201 -124773564 - AluSx SINE Alu 0 312 1 2051 270 74 28 chr10 15543201 15543235 -124773530 - L2 LINE L2 -955 2358 2327 1168 219 16 39 chr10 15543236 15543547 -124773218 + MLT2D LTR ERVL 68 371 -43 294 98 0 0 chr10 15543604 15543645 -124773120 + MLT2D LTR ERVL 480 520 0 968 280 69 15 chr10 15543645 15543977 -124772788 - L2 LINE L2 -995 2319 1970 1901 181 3 3 chr10 15544101 15544411 -124772354 + AluSx SINE Alu 1 310 -2 335 238 75 0 chr10 15544656 15544736 -124772029 - L2 LINE L2 0 3272 3187 224 315 192 35 chr10 15544814 15545529 -124771236 - L2 LINE L2 -549 2765 1939 28 29 0 0 chr10 15545704 15545739 -124771026 + AT_rich Low_complexity Low_complexity 1 35 0 675 294 55 46 chr10 15545815 15546142 -124770623 - MER102b DNA MER1_type -1 340 11 2086 128 13 0 chr10 15546692 15546998 -124769767 + AluSx SINE Alu 1 310 -2 202 296 0 0 chr10 15549051 15549105 -124767660 + L2 LINE L2 2798 2851 -463 380 235 47 0 chr10 15549144 15549229 -124767536 - L2 LINE L2 -5 3267 3179 189 361 73 79 chr10 15549243 15549584 -124767181 + L2 LINE L2 2899 3237 -35 494 346 75 61 chr10 15549721 15550001 -124766764 - L2 LINE L2 -4 3268 2985 205 357 62 36 chr10 15550050 15550274 -124766491 - L2 LINE L2 -518 2796 2567 490 337 99 40 chr10 15550698 15551270 -124765495 - L2 LINE L2 -1 3271 2650 189 271 205 74 chr10 15551284 15551418 -124765347 - L2 LINE L2 -1132 2182 2067 2331 93 0 7 chr10 15551418 15551719 -124765046 + AluSc SINE Alu 1 299 -10 189 271 205 74 chr10 15551719 15551886 -124764879 - L2 LINE L2 -1247 2067 1923 2338 81 7 3 chr10 15551886 15552184 -124764581 + AluSp SINE Alu 1 299 -14 189 271 205 74 chr10 15552184 15552261 -124764504 - L2 LINE L2 -1391 1923 1753 216 188 325 0 chr10 15552509 15552589 -124764176 - L2 LINE L2 -1606 1708 1603 324 298 23 30 chr10 15552680 15552811 -124763954 - L2 LINE L2 -1891 1423 1294 1490 172 107 0 chr10 15553467 15553729 -124763036 - AluJb SINE Alu -22 290 1 413 326 159 41 chr10 15554177 15554968 -124761797 - L2 LINE L2 -208 3064 2174 1745 96 4 35 chr10 15555881 15556055 -124760710 - AluSg SINE Alu -14 296 131 2620 22 6 13 chr10 15556055 15556367 -124760398 - AluY SINE Alu -1 310 1 1745 96 4 35 chr10 15556367 15556452 -124760313 - AluSg SINE Alu -179 131 45 2849 10 0 0 chr10 15557420 15557731 -124759034 - AluY SINE Alu 0 311 1 2229 99 10 10 chr10 15558227 15558540 -124758225 - AluSq SINE Alu 0 313 1 978 180 71 86 chr10 15558769 15558994 -124757771 - MER33 DNA MER1_type -2262 323 103 2119 121 3 6 chr10 15558994 15559307 -124757458 - AluSx SINE Alu 0 312 1 978 180 71 86 chr10 15559307 15559420 -124757345 - MER33 DNA MER1_type -2482 103 1 186 43 0 0 chr10 15561148 15561171 -124755594 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 265 68 104 chr10 15561180 15561429 -124755336 - MIR SINE MIR -21 241 2 1557 169 8 8 chr10 15562130 15562396 -124754369 + AluJo SINE Alu 26 291 -21 382 242 75 38 chr10 15563363 15563549 -124753216 + L1MC5 LINE L1 7724 7916 -45 270 238 170 20 chr10 15563895 15564042 -124752723 - MIR3 SINE MIR -7 201 33 1041 118 0 0 chr10 15615025 15615161 -124701604 + AluSq/x SINE Alu 1 136 -176 676 211 0 0 chr10 15615681 15615790 -124700975 - MER68 LTR ERV1 -1 561 453 1690 219 60 58 chr10 15615792 15616295 -124700470 - MER77 LTR ERV1 0 605 102 1227 144 3 1 chr10 15616606 15617773 -124698992 - ALR/Alpha Satellite centromeric 0 1169 1 1082 184 107 157 chr10 15617876 15618418 -124698347 + L1M2a LINE L1 372 886 -6282 4230 189 25 5 chr10 15618418 15619181 -124697584 + L1M2a LINE L1 642 1419 -5749 456 245 10 0 chr10 15619281 15619379 -124697386 + MER82 DNA MER2_type 554 652 -1 1818 132 20 37 chr10 15619670 15619965 -124696800 + AluSg SINE Alu 1 290 -20 292 293 116 43 chr10 15620020 15620348 -124696417 + L1M4 LINE L1 4456 4807 -1339 2124 131 0 0 chr10 15620483 15620774 -124695991 + AluSx SINE Alu 1 291 -21 24 53 0 0 chr10 15620957 15620995 -124695770 + AT_rich Low_complexity Low_complexity 1 38 0 2051 135 0 14 chr10 15621386 15621683 -124695082 + AluSx SINE Alu 1 293 -19 274 279 90 53 chr10 15621800 15622334 -124694431 - L1MEd LINE L1 -4550 1579 1037 1993 157 0 3 chr10 15622578 15622883 -124693882 - AluSx SINE Alu -8 304 1 261 243 54 14 chr10 15622945 15623019 -124693746 - MIR SINE MIR -45 217 141 753 283 26 11 chr10 15623139 15623330 -124693435 - MER58A DNA MER1_type -30 194 1 3735 307 56 58 chr10 15623332 15623643 -124693122 - ERVL LTR ERVL -3056 2708 2398 328 161 0 36 chr10 15623643 15623699 -124693066 + 7SK RNA RNA 5 58 -135 3735 307 56 58 chr10 15623699 15624806 -124691959 - ERVL LTR ERVL -3366 2398 1162 925 191 22 78 chr10 15624806 15624892 -124691873 + MER20 DNA MER1_type 1 90 -129 243 61 0 0 chr10 15624892 15624925 -124691840 + (TG)n Simple_repeat Simple_repeat 1 33 0 925 191 22 78 chr10 15624925 15625069 -124691696 + MER20 DNA MER1_type 90 218 -1 3735 307 56 58 chr10 15625069 15625654 -124691111 - ERVL LTR ERVL -4602 1162 578 1154 208 4 17 chr10 15625887 15626118 -124690647 - AluJb SINE Alu -20 292 65 2254 82 7 10 chr10 15627968 15628261 -124688504 + AluSg1 SINE Alu 1 292 -17 454 278 8 38 chr10 15628262 15628395 -124688370 + ERVL LTR ERVL 2900 3028 -2736 9327 206 63 26 chr10 15628422 15631884 -124684881 - L1MB2 LINE L1 -8 6163 2555 559 190 0 22 chr10 15632015 15632199 -124684566 + (TA)n Simple_repeat Simple_repeat 1 180 0 1158 179 85 0 chr10 15632199 15632423 -124684342 - AluJo SINE Alu -26 286 44 24 0 0 0 chr10 15632543 15632567 -124684198 + AT_rich Low_complexity Low_complexity 1 24 0 2102 103 34 0 chr10 15633181 15633473 -124683292 + AluSx SINE Alu 1 302 -10 2250 123 0 0 chr10 15634089 15634391 -124682374 - AluSx SINE Alu -10 302 1 270 285 91 24 chr10 15634391 15634556 -124682209 + L1ME LINE L1 5641 5816 -305 868 224 128 9 chr10 15634592 15634811 -124681954 - MIR SINE MIR -2 260 16 626 195 0 0 chr10 15635371 15635484 -124681281 - MER20 DNA MER1_type 0 219 107 261 200 200 21 chr10 15635650 15635745 -124681020 - MER112 DNA MER1_type -11 249 138 11229 158 25 41 chr10 15636368 15638076 -124678689 + L1MA4 LINE L1 2942 4676 -1624 2242 97 0 3 chr10 15638076 15638366 -124678399 + AluY SINE Alu 1 289 -22 11229 158 25 41 chr10 15638366 15638377 -124678388 + L1MA4 LINE L1 4676 4686 -1614 315 0 0 0 chr10 15638377 15638412 -124678353 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 11229 158 25 41 chr10 15638412 15639700 -124677065 + L1MA4 LINE L1 4686 5899 -401 6201 204 82 62 chr10 15639801 15641024 -124675741 - MER4-int LTR ERV1 -239 5094 3897 2354 52 0 7 chr10 15641024 15641330 -124675435 - AluY SINE Alu 0 304 1 6201 204 82 62 chr10 15641330 15642733 -124674032 - MER4-int LTR ERV1 -1436 3897 2451 487 168 19 123 chr10 15642814 15642969 -124673796 - MER4-int LTR ERV1 -2866 3732 3594 243 135 27 14 chr10 15642971 15643045 -124673720 + GA-rich Low_complexity Low_complexity 1 75 0 311 282 136 0 chr10 15644489 15644592 -124672173 - L2 LINE L2 -10 3303 3187 3457 34 10 0 chr10 15646411 15646829 -124669936 + L1PA3 LINE L1 5731 6152 -3 5648 31 1 1 chr10 15647033 15647738 -124669027 + L1PA4 LINE L1 5476 6155 0 2089 132 3 0 chr10 15648305 15648600 -124668165 + AluSq SINE Alu 1 296 -17 419 374 95 0 chr10 15649730 15649909 -124666856 - MER91A DNA MER1_type 0 196 1 641 239 25 61 chr10 15649969 15650166 -124666599 + MIR SINE MIR 28 217 -45 2032 145 0 3 chr10 15650228 15650532 -124666233 + AluSx SINE Alu 1 303 -9 313 298 105 0 chr10 15651359 15651473 -124665292 + L2 LINE L2 3187 3312 -1 22 0 0 0 chr10 15652701 15652723 -124664042 + AT_rich Low_complexity Low_complexity 1 22 0 1782 267 95 29 chr10 15653492 15655117 -124661648 + L1MCc LINE L1 877 2802 -4320 7097 176 42 12 chr10 15655159 15656888 -124659877 + L1M3f LINE L1 6 1777 -4065 1374 129 20 5 chr10 15657088 15657290 -124659475 - AluSq SINE Alu -106 207 3 988 160 13 0 chr10 15657295 15657445 -124659320 - FRAM SINE Alu -14 152 1 823 305 35 29 chr10 15657968 15658342 -124658423 + L1MC4a LINE L1 6456 6831 -977 2210 230 101 46 chr10 15658366 15658990 -124657775 + L1MC4 LINE L1 7086 7776 -266 1742 182 3 0 chr10 15658990 15659281 -124657484 + AluJo SINE Alu 3 294 -18 2210 230 101 46 chr10 15659281 15659561 -124657204 + L1MC4 LINE L1 7776 8039 -3 2270 97 0 3 chr10 15659877 15660175 -124656590 - AluSc SINE Alu -12 297 1 386 273 121 93 chr10 15663500 15663789 -124652976 + MER21B LTR ERV1 410 706 -157 2006 104 11 0 chr10 15664421 15664681 -124652084 + AluSg SINE Alu 1 263 -47 1590 142 35 16 chr10 15664683 15664937 -124651828 + AluSx SINE Alu 38 296 -16 1033 211 166 24 chr10 15664988 15665097 -124651668 - AluJo SINE Alu -30 282 190 234 0 0 0 chr10 15665097 15665123 -124651642 + (TA)n Simple_repeat Simple_repeat 2 27 0 1033 211 166 24 chr10 15665123 15665260 -124651505 - AluJo SINE Alu -122 190 1 923 296 86 57 chr10 15665318 15665735 -124651030 - L2 LINE L2 -188 3125 2686 1880 174 7 7 chr10 15665735 15666040 -124650725 + AluJo SINE Alu 1 305 -7 923 296 86 57 chr10 15666040 15666176 -124650589 - L2 LINE L2 -627 2686 2555 21161 97 8 5 chr10 15667051 15670930 -124645835 + L1PA7 LINE L1 2264 6154 0 4103 233 83 32 chr10 15670942 15671900 -124644865 + L1M4 LINE L1 2 910 -5736 973 255 118 19 chr10 15671900 15672323 -124644442 - MLT1C LTR MaLR -2 465 1 4103 233 83 32 chr10 15672323 15673257 -124643508 + L1M4 LINE L1 910 1949 -4697 1461 217 13 19 chr10 15673438 15673752 -124643013 - AluJo SINE Alu 0 312 1 483 195 56 87 chr10 15673773 15674028 -124642737 - MER65A-int LTR ERV1 -2894 2809 1701 880 234 6 40 chr10 15674033 15674542 -124642223 - MER65A-int LTR ERV1 -4279 592 57 1941 146 55 23 chr10 15674587 15674971 -124641794 - MER65A LTR ERV1 0 445 50 2684 304 44 7 chr10 15674971 15675949 -124640816 + ERVL LTR ERVL 3588 4601 -1163 332 102 43 24 chr10 15676016 15676110 -124640655 + MLT2F LTR ERVL 530 661 -2 582 235 44 20 chr10 15676122 15676326 -124640439 - L1ME3A LINE L1 -155 6015 5807 774 241 48 5 chr10 15676364 15676571 -124640194 - L1ME3A LINE L1 -468 5694 5479 28 0 0 0 chr10 15676571 15676599 -124640166 + AT_rich Low_complexity Low_complexity 1 28 0 427 180 45 9 chr10 15676615 15676726 -124640039 + L1MA8 LINE L1 5952 6066 -225 699 281 112 23 chr10 15676753 15677596 -124639169 - L1ME3A LINE L1 -728 5442 4519 348 230 79 8 chr10 15677606 15677732 -124639033 - L1ME3A LINE L1 -1 6169 6035 509 328 57 16 chr10 15677732 15677924 -124638841 + LTR16B LTR ERVL 1 200 -264 2163 118 10 0 chr10 15677979 15678275 -124638490 - AluSx SINE Alu -13 299 1 1262 152 0 5 chr10 15678332 15678564 -124638201 - AluJb SINE Alu 0 316 86 2091 113 10 3 chr10 15678695 15679006 -124637759 - AluSp SINE Alu 0 313 1 750 295 60 0 chr10 15679039 15679354 -124637411 - L1ME3A LINE L1 -131 6039 5706 1995 118 0 0 chr10 15679469 15679741 -124637024 - AluSx SINE Alu -40 272 1 1005 187 64 0 chr10 15680104 15680307 -124636458 - MER20 DNA MER1_type 0 219 4 2194 106 7 7 chr10 15680821 15681124 -124635641 - AluSx SINE Alu -9 303 1 483 230 36 50 chr10 15681230 15681369 -124635396 + MIR SINE MIR 1 137 -125 720 140 0 0 chr10 15681396 15681503 -124635262 + FRAM SINE Alu 42 148 -28 2154 111 0 10 chr10 15681523 15681820 -124634945 + AluSx SINE Alu 1 294 -18 371 241 24 0 chr10 15681843 15681926 -124634839 + MIR SINE MIR 164 248 -14 39302 38 3 5 chr10 15682145 15687189 -124629576 + L1P LINE L1 2 5036 -1110 2212 139 0 0 chr10 15687528 15687838 -124628927 - AluSx SINE Alu -2 310 1 946 268 108 44 chr10 15688045 15688627 -124628138 + L1ME1 LINE L1 1381 1924 -4291 311 43 21 0 chr10 15688627 15688674 -124628091 + L1PB1 LINE L1 6101 6148 -3 946 268 108 44 chr10 15688674 15688775 -124627990 + L1ME1 LINE L1 1924 2017 -4198 1133 194 44 4 chr10 15688775 15689002 -124627763 + MER46A DNA MER2_type 1 236 0 946 268 108 44 chr10 15689002 15689240 -124627525 + L1ME1 LINE L1 2017 2421 -3794 2496 72 0 3 chr10 15689261 15689567 -124627198 + AluY SINE Alu 1 305 -6 1319 244 113 22 chr10 15689568 15690286 -124626479 + L1ME1 LINE L1 2392 3197 -3018 775 177 0 8 chr10 15690286 15690416 -124626349 + FLAM_C SINE Alu 2 130 -3 1319 244 113 22 chr10 15690416 15690525 -124626240 + L1ME1 LINE L1 3197 3295 -2920 1277 113 166 39 chr10 15690586 15690815 -124625950 + AluSg SINE Alu 1 258 -52 324 0 0 0 chr10 15690817 15690853 -124625912 + (CA)n Simple_repeat Simple_repeat 2 37 0 1561 235 63 22 chr10 15690855 15691438 -124625327 + L1ME1 LINE L1 3383 3989 -2226 2937 201 103 71 chr10 15691454 15692250 -124624515 + L1ME1 LINE L1 4225 4994 -1241 2576 52 0 0 chr10 15692250 15692555 -124624210 + AluY SINE Alu 1 305 -6 2937 201 103 71 chr10 15692555 15693070 -124623695 + L1ME1 LINE L1 4994 5491 -744 2037 131 0 3 chr10 15693070 15693368 -124623397 + AluSg SINE Alu 1 297 -13 579 157 35 9 chr10 15693377 15693492 -124623273 + L1MA4 LINE L1 6177 6294 -6 2937 201 103 71 chr10 15693492 15694105 -124622660 + L1ME1 LINE L1 5498 6225 -10 1464 152 23 19 chr10 15694240 15694497 -124622268 - AluJo SINE Alu -52 260 3 927 89 279 6 chr10 15694809 15694988 -124621777 + MER30 DNA MER1_type 3 230 0 330 305 55 49 chr10 15695172 15695336 -124621429 + MIR SINE MIR 10 174 -88 764 210 151 0 chr10 15695544 15695730 -124621035 - MER58C DNA MER1_type 0 215 2 390 302 206 20 chr10 15695790 15696006 -124620759 - MIR SINE MIR 0 262 15 918 173 37 0 chr10 15696010 15696172 -124620593 - AluSq SINE Alu 0 313 146 811 184 0 0 chr10 15696283 15696451 -124620314 + L1MA4 LINE L1 6085 6252 -48 261 309 49 0 chr10 15696500 15696623 -124620142 - L1ME LINE L1 -295 5826 5698 342 214 0 0 chr10 15696990 15697060 -124619705 + L1MC3 LINE L1 6280 6349 -1436 237 234 0 16 chr10 15697065 15697129 -124619636 + L1ME LINE L1 695 757 -5313 2267 93 3 7 chr10 15697292 15697583 -124619182 + AluSg SINE Alu 1 290 -20 515 186 57 31 chr10 15697619 15697812 -124618953 - L1 LINE L1 -2873 3273 3076 1052 208 24 47 chr10 15698275 15698482 -124618283 - L1ME LINE L1 -593 5581 5382 3300 127 20 8 chr10 15698482 15698971 -124617794 - LTR42 LTR ERVL 0 495 1 1052 208 24 47 chr10 15698971 15699061 -124617704 - L1ME LINE L1 -792 5382 5291 439 324 44 17 chr10 15699485 15699660 -124617105 + L1ME LINE L1 5291 5460 -702 2191 129 7 0 chr10 15699660 15699970 -124616795 - AluSx SINE Alu 0 312 1 439 324 44 17 chr10 15699970 15700223 -124616542 + L1ME LINE L1 5460 5739 -423 29 78 0 0 chr10 15700539 15700603 -124616162 + AT_rich Low_complexity Low_complexity 1 64 0 300 200 0 0 chr10 15700804 15700864 -124615901 - LTR16A LTR ERVL 0 450 391 * 4375 127 1 11 chr10 15700863 15701421 -124615344 + Tigger1 DNA MER2_type 1699 2250 -168 2382 48 34 3 chr10 15701421 15701712 -124615053 - AluY SINE Alu 0 311 12 4375 127 1 11 chr10 15701712 15701877 -124614888 + Tigger1 DNA MER2_type 2250 2415 -3 1446 186 3 54 chr10 15701905 15702201 -124614564 + AluJo SINE Alu 11 291 -21 660 283 69 73 chr10 15702260 15702836 -124613929 - MER21B LTR ERV1 -157 706 133 259 261 36 80 chr10 15702859 15702997 -124613768 - MER77 LTR ERV1 -408 197 66 3208 147 63 38 chr10 15703208 15703483 -124613282 + LTR34 LTR ERV1 1 268 -431 1664 214 80 89 chr10 15703483 15703642 -124613123 + LTR8 LTR ERV1 1 160 -531 2766 3 0 3 chr10 15703642 15703946 -124612819 + AluYa5 SINE Alu 1 303 -8 1664 214 80 89 chr10 15703946 15704483 -124612282 + LTR8 LTR ERV1 160 691 0 3208 147 63 38 chr10 15704483 15704889 -124611876 + LTR34 LTR ERV1 268 699 0 362 279 54 16 chr10 15704900 15705158 -124611607 + L1MC5 LINE L1 7640 7907 -54 1982 136 54 70 chr10 15705185 15705448 -124611317 + Tigger2a DNA MER2_type 1 256 -2452 1511 98 110 30 chr10 15705448 15705684 -124611081 + AluSp SINE Alu 47 301 -12 1982 136 54 70 chr10 15705684 15705861 -124610904 + Tigger2a DNA MER2_type 256 434 0 3906 111 45 96 chr10 15706461 15707288 -124609477 + LTR1 LTR ERV1 1 785 0 863 228 129 49 chr10 15707297 15707735 -124609030 + MER110A LTR ERV1 39 491 0 497 239 75 31 chr10 15708433 15708592 -124608173 + MIR SINE MIR 61 226 -36 479 222 15 89 chr10 15709287 15709422 -124607343 - MIR SINE MIR -102 160 36 464 319 69 25 chr10 15709523 15709683 -124607082 + MER91A DNA MER1_type 29 195 -1 195 328 60 0 chr10 15710086 15710153 -124606612 + L2 LINE L2 2995 3065 -248 2469 62 3 0 chr10 15710156 15710447 -124606318 + AluSp SINE Alu 1 292 -21 1235 244 73 0 chr10 15710845 15711254 -124605511 - L1M4 LINE L1 -3058 3088 2650 580 163 23 8 chr10 15711783 15711912 -124604853 - L1MD3 LINE L1 -954 7041 6911 412 145 5 0 chr10 15711918 15711999 -124604766 + L1P5 LINE L1 5397 5479 -677 10591 208 36 24 chr10 15712051 15715673 -124601092 - L1PA15-16 LINE L1 -1228 5621 1851 486 238 21 21 chr10 15715667 15715810 -124600955 - L1M4 LINE L1 -1953 4193 4051 * 1703 270 37 2 chr10 15715813 15716458 -124600307 - L1M4 LINE L1 -2300 3846 3179 1036 258 58 0 chr10 15716543 15716919 -124599846 - L1M4 LINE L1 -3177 2969 2572 251 158 18 18 chr10 15716919 15716976 -124599789 + T-rich Low_complexity Low_complexity 2 58 0 768 152 0 146 chr10 15717277 15717480 -124599285 + AluSg/x SINE Alu 134 310 0 290 236 14 0 chr10 15717956 15718028 -124598737 - L1M4 LINE L1 -3559 2587 2515 318 270 144 9 chr10 15721052 15721163 -124595602 + L2 LINE L2 3187 3312 -1 22 0 0 0 chr10 15721342 15721364 -124595401 + AT_rich Low_complexity Low_complexity 1 22 0 624 239 23 0 chr10 15721889 15722019 -124594746 - FLAM_C SINE Alu 0 133 1 2835 171 18 34 chr10 15722597 15723158 -124593607 - LTR38 LTR ERV1 0 556 5 1467 269 35 63 chr10 15723517 15723607 -124593158 - LOR1-int LTR ERV1 -413 7343 7252 1892 140 27 10 chr10 15723607 15723900 -124592865 - AluSx SINE Alu -12 300 3 1467 269 35 63 chr10 15723900 15724275 -124592490 - LOR1-int LTR ERV1 -504 7252 6868 3760 122 18 22 chr10 15724275 15724825 -124591940 + LTR14 LTR ERVK 1 548 0 1467 269 35 63 chr10 15724825 15725392 -124591373 - LOR1-int LTR ERV1 -888 6868 6317 369 305 40 29 chr10 15725549 15725723 -124591042 - LOR1-int LTR ERV1 -514 7606 7431 2862 133 70 79 chr10 15725798 15726483 -124590282 - LOR1-int LTR ERV1 -6607 1513 835 5116 140 36 28 chr10 15726483 15727382 -124589383 + LTR5 LTR ERVK 1 906 -63 1056 114 17 29 chr10 15727382 15727557 -124589208 - THE1B LTR MaLR -17 347 175 1196 91 68 109 chr10 15727601 15727653 -124589112 - THE1B LTR MaLR -152 212 159 2200 103 0 0 chr10 15727653 15727980 -124588785 - AluSg SINE Alu 0 327 1 1196 91 68 109 chr10 15727980 15728147 -124588618 - THE1B LTR MaLR -205 159 1 254 254 0 0 chr10 15728147 15728204 -124588561 - LTR38 LTR ERV1 -499 57 1 203 269 0 19 chr10 15728399 15728451 -124588314 + (TATG)n Simple_repeat Simple_repeat 4 54 0 307 189 14 23 chr10 15728505 15728594 -124588171 - L1MC4 LINE L1 0 8041 7911 447 288 118 19 chr10 15728701 15728898 -124587867 - MLT1H1 LTR MaLR -287 268 22 2174 90 45 0 chr10 15728938 15729227 -124587538 + AluYa5 SINE Alu 1 302 -9 2311 221 100 10 chr10 15729227 15730028 -124586737 - L1MC4 LINE L1 -285 7757 6744 405 54 0 0 chr10 15730035 15730091 -124586674 + (TG)n Simple_repeat Simple_repeat 2 57 0 558 315 37 11 chr10 15730094 15730364 -124586401 - L1MC4a LINE L1 -1228 6580 6304 1454 195 56 0 chr10 15730365 15730666 -124586099 + AluJb SINE Alu 1 316 0 560 112 11 0 chr10 15730680 15730769 -124585996 - L1MA4 LINE L1 -455 5845 5756 2701 120 21 54 chr10 15730769 15731240 -124585525 + L1MA4 LINE L1 5828 6294 -6 2031 133 7 3 chr10 15731642 15731950 -124584815 - AluSg SINE Alu -1 309 1 192 163 0 0 chr10 15732112 15732155 -124584610 + T-rich Low_complexity Low_complexity 1 43 0 241 143 0 24 chr10 15732316 15732358 -124584407 + L1MA4 LINE L1 6199 6239 -61 260 241 157 12 chr10 15732894 15732977 -124583788 - L2 LINE L2 -32 3281 3187 2470 201 46 114 chr10 15735208 15735416 -124581349 + L1M4c LINE L1 2026 2246 -4136 1661 199 0 3 chr10 15735416 15735713 -124581052 + AluJo SINE Alu 1 296 -16 2470 201 46 114 chr10 15735713 15735796 -124580969 + L1M4c LINE L1 2246 2333 -4049 2207 135 0 0 chr10 15735796 15736100 -124580665 + AluSx SINE Alu 1 304 -8 2470 201 46 114 chr10 15736100 15737038 -124579727 + L1M4c LINE L1 2333 3175 -3207 4620 136 29 1 chr10 15737433 15738166 -124578599 + Tigger2 DNA MER2_type 1 753 -1965 2374 87 7 3 chr10 15738243 15738552 -124578213 - AluSg SINE Alu 0 310 1 440 288 69 12 chr10 15738933 15739093 -124577672 + MIR SINE MIR 64 232 -30 546 272 111 21 chr10 15739647 15739882 -124576883 - MIR SINE MIR 0 262 7 1839 131 45 7 chr10 15739917 15740208 -124576557 + AluJo SINE Alu 5 306 -6 22 0 0 0 chr10 15740251 15740273 -124576492 + AT_rich Low_complexity Low_complexity 1 22 0 239 163 47 0 chr10 15740280 15740323 -124576442 - L2 LINE L2 -260 3053 3009 2362 96 0 0 chr10 15740403 15740706 -124576059 - AluSx SINE Alu -9 303 1 198 277 0 0 chr10 15740829 15740876 -124575889 - MIR3 SINE MIR -15 193 147 478 235 43 0 chr10 15741437 15741552 -124575213 - MIR SINE MIR -43 219 100 449 222 103 12 chr10 15741692 15741830 -124574935 + MIR SINE MIR 13 146 -63 1129 191 27 22 chr10 15741911 15742136 -124574629 - L1MB7 LINE L1 -19 6165 5940 517 314 90 0 chr10 15742631 15742819 -124573946 - MIR SINE MIR -56 206 2 1239 126 11 6 chr10 15742819 15742994 -124573771 - AluJo SINE Alu -136 176 1 2417 131 8 27 chr10 15743680 15744114 -124572651 - L1PB1 LINE L1 -3 6161 5720 393 22 0 0 chr10 15744114 15744160 -124572605 + (CA)n Simple_repeat Simple_repeat 2 47 0 2326 95 0 3 chr10 15744165 15744469 -124572296 - AluSg SINE Alu -7 303 1 2417 131 8 27 chr10 15744469 15744577 -124572188 - L1PB1 LINE L1 -448 5716 5674 227 250 33 43 chr10 15745434 15745526 -124571239 - MER112 DNA MER1_type -168 92 2 1112 243 100 48 chr10 15745761 15746101 -124570664 + L2 LINE L2 2553 2927 -386 1740 140 9 92 chr10 15746101 15746429 -124570336 - AluJb SINE Alu -10 302 2 1112 243 100 48 chr10 15746429 15746557 -124570208 + L2 LINE L2 2927 3047 -266 672 99 0 0 chr10 15746559 15746650 -124570115 - AluSc SINE Alu -16 293 203 457 146 5 19 chr10 15746689 15746892 -124569873 + AluJo SINE Alu 1 286 -26 378 0 0 0 chr10 15746892 15746934 -124569831 + (CATA)n Simple_repeat Simple_repeat 2 43 0 292 261 58 51 chr10 15746947 15747085 -124569680 + L2 LINE L2 3091 3229 -84 599 182 9 9 chr10 15747085 15747195 -124569570 - FRAM SINE Alu 0 176 67 190 303 40 0 chr10 15747233 15747309 -124569456 + L2 LINE L2 3222 3300 -13 186 103 0 0 chr10 15747310 15747339 -124569426 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 226 262 24 24 chr10 15747494 15747578 -124569187 + CT-rich Low_complexity Low_complexity 3 86 0 2396 92 0 0 chr10 15748039 15748342 -124568423 - AluSc SINE Alu -6 303 1 321 213 93 0 chr10 15748374 15748449 -124568316 - L1ME3A LINE L1 -5 6165 6084 407 163 143 13 chr10 15748468 15748575 -124568190 - L1ME2 LINE L1 0 6164 6044 2065 204 60 50 chr10 15748923 15748975 -124567790 - MLT1F LTR MaLR 0 542 492 2112 110 0 39 chr10 15748975 15749285 -124567480 + AluSq SINE Alu 1 298 -15 2065 204 60 50 chr10 15749285 15749753 -124567012 - MLT1F LTR MaLR -50 492 17 2347 84 0 3 chr10 15750261 15750558 -124566207 - AluY SINE Alu -15 296 1 627 280 98 29 chr10 15750736 15751318 -124565447 - L1M4 LINE L1 -1037 5109 4488 4478 184 28 19 chr10 15751565 15752858 -124563907 + L1MB8 LINE L1 4866 6177 -1 279 79 0 0 chr10 15752871 15752909 -124563856 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 9719 62 4 105 chr10 15752912 15754452 -124562313 + SVA Other Other 1 1384 -2 35 0 0 0 chr10 15754452 15754487 -124562278 + AT_rich Low_complexity Low_complexity 1 35 0 428 307 107 43 chr10 15754623 15755135 -124561630 + L1ME2 LINE L1 5328 5882 -282 25 0 0 0 chr10 15755300 15755325 -124561440 + AT_rich Low_complexity Low_complexity 1 25 0 485 289 172 12 chr10 15755464 15755789 -124560976 - L1M4 LINE L1 -2740 3406 3030 1911 134 46 60 chr10 15755793 15755970 -124560795 - MER47A DNA MER2_type -1957 366 188 1603 121 0 0 chr10 15755970 15756214 -124560551 - AluSx SINE Alu 0 301 58 1911 134 46 60 chr10 15756214 15756401 -124560364 - MER47A DNA MER2_type -2135 188 6 23 0 0 0 chr10 15756627 15756650 -124560115 + AT_rich Low_complexity Low_complexity 1 23 0 304 309 0 21 chr10 15757468 15757565 -124559200 + MIR SINE MIR 61 155 -107 1211 251 97 68 chr10 15757662 15758240 -124558525 - MER67C LTR ERV1 -45 665 71 256 326 11 11 chr10 15758249 15758341 -124558424 - MIR SINE MIR -167 95 4 315 218 69 11 chr10 15758437 15758524 -124558241 - L1ME4a LINE L1 -6 6115 6024 991 144 14 0 chr10 15758542 15758688 -124558077 + FRAM SINE Alu 1 143 -33 281 189 0 19 chr10 15758695 15758748 -124558017 - L1ME4a LINE L1 -88 6033 5982 2503 42 0 0 chr10 15759180 15759504 -124557261 - AluY SINE Alu 0 324 1 214 318 118 0 chr10 15759527 15759637 -124557128 + L2 LINE L2 3137 3259 -13 313 267 143 0 chr10 15759949 15760054 -124556711 - MIR SINE MIR -31 231 112 197 289 199 36 chr10 15760159 15760325 -124556440 - L2 LINE L2 -225 3047 2855 2037 120 3 28 chr10 15760530 15760875 -124555890 + AluSq SINE Alu 1 313 0 2238 63 22 0 chr10 15761507 15761778 -124554987 - AluSg SINE Alu -5 305 29 192 40 0 0 chr10 15761985 15762010 -124554755 + (T)n Simple_repeat Simple_repeat 1 25 0 474 277 29 0 chr10 15762398 15762535 -124554230 + MIR SINE MIR 95 235 -27 287 255 99 50 chr10 15763072 15763213 -124553552 - MIR SINE MIR -95 167 20 202 185 74 0 chr10 15763218 15763272 -124553493 + T-rich Low_complexity Low_complexity 1 58 0 1566 147 50 41 chr10 15763527 15763847 -124552918 + MER33 DNA MER1_type 2 324 0 280 219 10 52 chr10 15763969 15763986 -124552779 - L1MC5 LINE L1 -33 7928 7912 2327 107 3 0 chr10 15763986 15764296 -124552469 - AluSq SINE Alu -2 311 1 280 219 10 52 chr10 15764296 15764374 -124552391 - L1MC5 LINE L1 -49 7912 7837 22 0 0 0 chr10 15764407 15764429 -124552336 + AT_rich Low_complexity Low_complexity 1 22 0 1799 136 89 16 chr10 15764442 15764758 -124552007 + MER1B DNA MER1_type 1 339 0 1080 60 8 0 chr10 15764788 15764922 -124551843 - AluSg/x SINE Alu -13 299 165 22 35 0 0 chr10 15765059 15765088 -124551677 + AT_rich Low_complexity Low_complexity 1 29 0 2357 105 0 0 chr10 15765325 15765630 -124551135 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 15765638 15765659 -124551106 + AT_rich Low_complexity Low_complexity 1 21 0 15094 112 14 5 chr10 15865749 15868039 -124448726 - HERVE LTR ERV1 -4396 3417 1108 217 223 11 71 chr10 15868118 15868302 -124448463 + (TAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr10 15868321 15868349 -124448416 + AT_rich Low_complexity Low_complexity 1 28 0 1346 232 110 33 chr10 15868395 15869654 -124447111 + SATR1 Satellite Satellite 1 1356 -24 765 244 278 2 chr10 15869949 15870825 -124445940 + SATR1 Satellite Satellite 1 1117 -1 613 241 305 11 chr10 15870907 15871255 -124445510 + SATR1 Satellite Satellite 20 469 -1 910 218 188 60 chr10 15871281 15871746 -124445019 + SATR1 Satellite Satellite 1 524 -97 818 227 195 27 chr10 15871793 15872203 -124444562 + SATR1 Satellite Satellite 1 478 -404 2071 106 0 20 chr10 15873899 15874200 -124442565 + AluSc SINE Alu 1 295 -14 247 327 44 26 chr10 15874266 15874379 -124442386 - L2 LINE L2 0 3272 3158 2151 119 0 10 chr10 15874781 15875092 -124441673 - AluSg SINE Alu -2 308 1 262 319 70 33 chr10 15875486 15875699 -124441066 + MIR SINE MIR 32 252 -10 212 158 0 0 chr10 15875718 15875756 -124441009 + (CAT)n Simple_repeat Simple_repeat 3 40 0 1714 234 22 46 chr10 15876541 15876783 -124439982 - L1MB3 LINE L1 -32 6151 5905 1961 142 10 0 chr10 15876783 15877078 -124439687 - AluSx SINE Alu -3 309 12 1714 234 22 46 chr10 15877078 15877204 -124439561 - L1MB3 LINE L1 -278 5905 5777 2131 119 0 10 chr10 15877204 15877514 -124439251 - AluSx SINE Alu 0 312 6 1714 234 22 46 chr10 15877514 15878509 -124438256 - L1MB3 LINE L1 -406 5777 4818 1303 125 5 5 chr10 15878554 15878754 -124438011 + AluSp SINE Alu 1 200 -113 1404 215 2 69 chr10 15878917 15879141 -124437624 - L1MA4 LINE L1 -153 6147 5960 1683 160 4 7 chr10 15879141 15879422 -124437343 - AluSx SINE Alu -32 280 1 1404 215 2 69 chr10 15879422 15879601 -124437164 - L1MA4 LINE L1 -340 5960 5771 348 238 105 35 chr10 15879643 15879786 -124436979 + HsTC2 DNA Tc2 1631 1783 -115 2132 114 0 63 chr10 15879791 15880124 -124436641 + AluSp SINE Alu 1 312 -1 344 301 20 7 chr10 15880282 15880428 -124436337 + MER5B DNA MER1_type 25 172 -6 694 248 40 0 chr10 15880533 15880731 -124436034 - MER6B DNA MER2_type 0 210 5 1352 126 27 31 chr10 15882630 15882853 -124433912 + AluSq SINE Alu 1 222 -91 878 227 278 3 chr10 15882857 15883188 -124433577 + SATR1 Satellite Satellite 48 469 -1 1264 221 202 51 chr10 15883216 15884096 -124432669 + SATR1 Satellite Satellite 1 1013 -2 1383 188 74 116 chr10 15884133 15884617 -124432148 + SATR1 Satellite Satellite 7 470 0 1355 139 5 0 chr10 15884791 15884992 -124431773 + AluSg/x SINE Alu 103 304 -6 396 0 0 0 chr10 15885459 15885503 -124431262 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 952 134 0 7 chr10 15885506 15885648 -124431117 - AluSg/x SINE Alu -26 283 143 882 133 113 0 chr10 15885704 15885855 -124430910 - AluY SINE Alu -9 302 135 1869 177 39 21 chr10 15885857 15886246 -124430519 + L1MB7 LINE L1 5700 6095 -89 2284 91 10 3 chr10 15886276 15886572 -124430193 - AluSx SINE Alu -14 298 1 2040 116 11 0 chr10 15886597 15886881 -124429884 + AluSx SINE Alu 1 287 -25 333 177 25 0 chr10 15886987 15887066 -124429699 + AluS SINE Alu 220 300 -1 1423 218 24 40 chr10 15888060 15888282 -124428483 + MLT1A1 LTR MaLR 1 216 -149 2179 109 0 23 chr10 15888282 15888585 -124428180 + AluSx SINE Alu 1 296 -16 1423 218 24 40 chr10 15888585 15888733 -124428032 + MLT1A1 LTR MaLR 216 365 0 25 31 0 0 chr10 15888898 15888930 -124427835 + AT_rich Low_complexity Low_complexity 1 32 0 248 272 43 22 chr10 15889166 15889258 -124427507 + L1ME LINE L1 5559 5652 -469 1914 129 27 7 chr10 15889405 15889700 -124427065 - AluSq SINE Alu -12 301 1 249 298 80 27 chr10 15889792 15889980 -124426785 - L1M4 LINE L1 -2235 3911 3714 356 276 20 91 chr10 15889987 15890001 -124426764 - L1M4 LINE L1 -3099 3047 3034 1967 128 21 3 chr10 15890001 15890290 -124426475 - AluSx SINE Alu -18 294 1 356 276 20 91 chr10 15890290 15890395 -124426370 - L1M4 LINE L1 -3112 3034 2923 1522 204 3 11 chr10 15890395 15890727 -124426038 - AluJo SINE Alu 0 330 1 356 276 20 91 chr10 15890727 15890859 -124425906 - L1M4 LINE L1 -3223 2923 2812 1021 257 148 42 chr10 15891081 15891570 -124425195 + MLT2F LTR ERVL 1 543 -120 259 279 47 23 chr10 15891570 15891656 -124425109 - LTR52 LTR ERVL 0 421 334 189 195 0 0 chr10 15891687 15891728 -124425037 + (CA)n Simple_repeat Simple_repeat 1 41 0 297 245 199 0 chr10 15891862 15891996 -124424769 - LTR52 LTR ERVL -240 181 13 1813 144 16 7 chr10 15891996 15892301 -124424464 + AluSx SINE Alu 1 308 -4 297 245 199 0 chr10 15892301 15892317 -124424448 - LTR52 LTR ERVL -408 13 1 230 305 48 0 chr10 15892324 15892429 -124424336 + MLT2F LTR ERVL 552 661 -2 2020 100 24 3 chr10 15892710 15893000 -124423765 - AluSx SINE Alu -16 296 1 2827 13 0 0 chr10 15893034 15893339 -124423426 - AluYb8 SINE Alu -13 305 1 2276 123 0 0 chr10 15893660 15893970 -124422795 + AluSx SINE Alu 1 310 -2 1227 166 0 5 chr10 15894063 15894262 -124422503 + AluJb SINE Alu 85 282 -30 216 0 0 0 chr10 15894264 15894288 -124422477 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 663 261 51 20 chr10 15894288 15894541 -124422224 + LTR16C LTR ERVL 231 491 0 856 111 0 16 chr10 15894772 15894898 -124421867 - AluJ SINE Alu -1 311 188 606 229 67 77 chr10 15895006 15895392 -124421373 + LTR15 LTR ERV1 112 596 0 881 151 157 18 chr10 15895392 15895558 -124421207 - AluJ SINE Alu -119 193 5 2077 127 3 0 chr10 15895848 15896169 -124420596 - AluSq SINE Alu 0 322 1 1873 108 46 32 chr10 15896287 15896607 -124420158 - THE1B LTR MaLR -3 352 1 2540 197 72 2 chr10 15896614 15897131 -124419634 + MER68 LTR ERV1 6 558 -4 2049 134 3 0 chr10 15897380 15897671 -124419094 - AluSx SINE Alu -19 293 2 1816 151 6 51 chr10 15897725 15898037 -124418728 + AluJo SINE Alu 1 298 -14 458 251 120 31 chr10 15898143 15898334 -124418431 - HERVL68 LTR ERVL -439 2598 2391 2168 97 17 7 chr10 15898432 15898722 -124418043 - AluSx SINE Alu -18 294 2 1940 121 6 53 chr10 15899007 15899119 -124417646 + AluSx SINE Alu 1 117 -195 3364 100 4 0 chr10 15899119 15899570 -124417195 + MLT2A2 LTR ERVL 1 453 0 1940 121 6 53 chr10 15899570 15899779 -124416986 + AluSx SINE Alu 117 307 -5 1951 136 7 14 chr10 15900007 15900302 -124416463 - AluSx SINE Alu -11 301 9 300 167 26 13 chr10 15900584 15900662 -124416103 + GA-rich Low_complexity Low_complexity 2 80 0 648 199 53 74 chr10 15900683 15900984 -124415781 - MSTD LTR MaLR 0 396 103 2275 108 3 0 chr10 15901388 15901685 -124415080 - AluSq SINE Alu -15 298 1 344 260 12 82 chr10 15902176 15902313 -124414452 + MER5A DNA MER1_type 8 142 -47 2081 108 10 10 chr10 15902313 15902608 -124414157 + AluSg SINE Alu 1 295 -15 344 260 12 82 chr10 15902608 15902653 -124414112 + MER5A DNA MER1_type 142 189 0 1357 176 10 80 chr10 15903339 15903515 -124413250 - AluJo SINE Alu -31 281 133 2122 134 0 13 chr10 15903515 15903821 -124412944 + AluSx SINE Alu 1 302 -10 1357 176 10 80 chr10 15903821 15903946 -124412819 - AluJo SINE Alu -179 133 1 182 305 74 0 chr10 15904069 15904164 -124412601 + L2 LINE L2 2909 3010 -262 * 225 213 0 0 chr10 15904152 15904199 -124412566 - L2 LINE L2 -1 3312 3266 2153 75 4 4 chr10 15904387 15904653 -124412112 - AluSg SINE Alu -8 302 37 210 310 0 0 chr10 15904833 15904904 -124411861 - L2 LINE L2 -65 3248 3178 2389 96 3 3 chr10 15905354 15905667 -124411098 - AluSp SINE Alu 0 313 1 2165 121 0 3 chr10 15905668 15905966 -124410799 - AluSx SINE Alu -15 297 1 2300 110 0 3 chr10 15906241 15906542 -124410223 - AluSq SINE Alu -13 300 1 1239 93 44 6 chr10 15906542 15906719 -124410046 - L1MA1 LINE L1 -47 6255 6072 425 261 7 72 chr10 15906865 15906939 -124409826 + MIR SINE MIR 12 72 -190 2594 58 0 10 chr10 15906939 15907249 -124409516 - AluY SINE Alu -4 307 1 425 261 7 72 chr10 15907249 15907327 -124409438 + MIR SINE MIR 72 154 -108 1921 122 44 10 chr10 15907556 15907852 -124408913 - AluSq SINE Alu -2 311 6 455 271 57 32 chr10 15908134 15908381 -124408384 - L1MEc LINE L1 -3904 2636 2384 23 0 0 0 chr10 15908511 15908534 -124408231 + AT_rich Low_complexity Low_complexity 1 23 0 493 157 0 34 chr10 15908534 15908623 -124408142 - AluSg/x SINE Alu -5 304 219 730 280 70 24 chr10 15908627 15909140 -124407625 - L1MEc LINE L1 -4474 2107 1522 1691 133 0 16 chr10 15909888 15910143 -124406622 + AluSx SINE Alu 55 305 -7 1758 112 116 8 chr10 15910153 15910443 -124406322 + AluSg SINE Alu 1 318 0 1730 113 4 4 chr10 15910555 15910795 -124405970 - AluSx SINE Alu -10 302 63 218 286 12 24 chr10 15911125 15911209 -124405556 + CT-rich Low_complexity Low_complexity 2 84 0 1869 117 10 38 chr10 15911516 15911806 -124404959 + AluSx SINE Alu 15 296 -16 2103 133 0 0 chr10 15912305 15912607 -124404158 - AluSx SINE Alu -10 302 1 1869 140 14 4 chr10 15912911 15913190 -124403575 + AluSp SINE Alu 1 282 -31 180 0 0 0 chr10 15913190 15913210 -124403555 + (T)n Simple_repeat Simple_repeat 1 20 0 1463 231 4 0 chr10 15913241 15913522 -124403243 - AluJo SINE Alu -30 282 1 406 212 51 8 chr10 15914083 15914201 -124402564 - L1MEc LINE L1 -4129 2267 2145 882 126 0 0 chr10 15914227 15914346 -124402419 + FLAM_C SINE Alu 3 121 -22 1968 130 0 0 chr10 15914355 15914631 -124402134 - AluSx SINE Alu -10 302 27 2428 70 3 3 chr10 15914631 15914930 -124401835 - AluY SINE Alu -10 301 1 295 143 0 0 chr10 15914930 15914972 -124401793 - AluSx SINE Alu -260 42 1 285 229 0 12 chr10 15915026 15915109 -124401656 - L1MEc LINE L1 -4282 2114 2033 1567 88 0 0 chr10 15915150 15915363 -124401402 - AluSg/x SINE Alu 0 315 103 230 276 149 0 chr10 15915749 15915883 -124400882 - HAL1b LINE L1 -541 807 654 832 224 22 72 chr10 15915905 15916090 -124400675 - MER58A DNA MER1_type -2196 224 50 2152 130 3 3 chr10 15916090 15916389 -124400376 + AluSx SINE Alu 1 299 -13 832 224 22 72 chr10 15916389 15916426 -124400339 - MER58A DNA MER1_type -2370 50 13 824 176 0 0 chr10 15916537 15916662 -124400103 - FLAM_C SINE Alu -18 125 1 2172 98 6 44 chr10 15916814 15917130 -124399635 - AluSx SINE Alu -8 304 1 3824 152 24 61 chr10 15917240 15917806 -124398959 + MER50 LTR ERV1 1 586 -148 1609 162 16 65 chr10 15917806 15918115 -124398650 - AluJb SINE Alu -14 298 5 3824 152 24 61 chr10 15918115 15918129 -124398636 + MER50 LTR ERV1 586 599 -135 2262 113 0 7 chr10 15918129 15918430 -124398335 - AluSx SINE Alu -13 299 1 3824 152 24 61 chr10 15918430 15918586 -124398179 + MER50 LTR ERV1 599 711 -23 1441 119 0 5 chr10 15919046 15919248 -124397517 - AluSg/x SINE Alu -4 306 106 2140 121 0 0 chr10 15919940 15920220 -124396545 - AluSx SINE Alu -14 298 19 890 274 52 16 chr10 15920255 15920561 -124396204 - L1ME LINE L1 -366 5873 5557 217 71 0 48 chr10 15920678 15920720 -124396045 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1558 183 44 24 chr10 15920720 15920885 -124395880 - AluJb SINE Alu -11 301 126 180 0 0 0 chr10 15920885 15920905 -124395860 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1558 183 44 24 chr10 15920905 15921034 -124395731 - AluJb SINE Alu -186 126 1 680 273 69 62 chr10 15921034 15921484 -124395281 - L1ME LINE L1 -865 5350 4894 1974 142 42 0 chr10 15921484 15921772 -124394993 - AluSx SINE Alu -10 302 3 680 273 69 62 chr10 15921772 15921841 -124394924 - L1ME LINE L1 -1321 4894 4827 1351 229 89 10 chr10 15921873 15922274 -124394491 - L1 LINE L1 -1265 4881 4457 1099 193 0 30 chr10 15922284 15922481 -124394284 - AluJo SINE Alu -121 191 1 915 267 65 67 chr10 15922481 15922960 -124393805 - L1ME LINE L1 -4341 2055 1578 860 138 0 28 chr10 15923006 15923187 -124393578 + (TCCC)n Simple_repeat Simple_repeat 4 179 0 2161 118 3 3 chr10 15924202 15924498 -124392267 - AluSx SINE Alu -16 296 1 1621 192 27 30 chr10 15924888 15925022 -124391743 - MER58B DNA MER1_type -2083 337 204 1663 191 0 26 chr10 15925022 15925331 -124391434 + AluJo SINE Alu 1 301 -11 1621 192 27 30 chr10 15925331 15925534 -124391231 - MER58B DNA MER1_type -2216 204 1 2258 92 3 10 chr10 15925663 15925958 -124390807 - AluSx SINE Alu -19 293 1 2454 63 3 10 chr10 15926388 15926688 -124390077 - AluSc SINE Alu -11 298 1 2132 91 14 14 chr10 15927510 15927774 -124388991 + AluSx SINE Alu 15 294 -18 211 37 0 0 chr10 15927774 15927801 -124388964 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2132 91 14 14 chr10 15927801 15927821 -124388944 + AluSx SINE Alu 293 312 0 1903 123 0 4 chr10 15928193 15928469 -124388296 + AluSx SINE Alu 1 275 -37 1390 161 13 79 chr10 15928536 15928853 -124387912 + AluJb SINE Alu 1 296 -16 1985 129 3 16 chr10 15928984 15929295 -124387470 - AluSx SINE Alu -5 307 1 423 269 34 0 chr10 15929430 15929549 -124387216 + AluSq/x SINE Alu 2 124 -179 2109 217 110 12 chr10 15930124 15931891 -124384874 + SATR1 Satellite Satellite 1 1938 -20 14958 89 12 18 chr10 15931891 15933947 -124382818 - HERVE LTR ERV1 -2648 5165 3122 320 309 12 0 chr10 15934353 15934437 -124382328 - L2 LINE L2 -8 3305 3221 1852 123 0 11 chr10 15934461 15934738 -124382027 + AluSx SINE Alu 1 274 -38 216 0 0 0 chr10 15934745 15934769 -124381996 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2285 100 0 0 chr10 15935166 15935475 -124381290 + AluSx SINE Alu 2 310 -2 2062 90 0 61 chr10 15935726 15936038 -124380727 - AluSx SINE Alu -19 293 1 2185 71 3 7 chr10 15936397 15936691 -124380074 - AluSg SINE Alu -2 308 16 1605 186 86 19 chr10 15936885 15937246 -124379519 - MSTB LTR MaLR 0 426 42 195 259 19 0 chr10 15937540 15937594 -124379171 - MIR SINE MIR -72 136 82 25 0 0 0 chr10 15937791 15937816 -124378949 + AT_rich Low_complexity Low_complexity 1 25 0 1893 134 3 10 chr10 15937821 15938112 -124378653 + AluSq SINE Alu 1 289 -24 1400 151 23 19 chr10 15938114 15938373 -124378392 - AluJo SINE Alu -30 282 23 2017 131 0 6 chr10 15938404 15938716 -124378049 + AluSg SINE Alu 1 310 0 400 184 0 0 chr10 15938770 15938846 -124377919 + L1MEc LINE L1 2039 2114 -4282 2166 96 0 0 chr10 15938904 15939196 -124377569 + AluSx SINE Alu 1 292 -20 3172 83 2 2 chr10 15939604 15940011 -124376754 + THE1B-int LTR MaLR 1174 1580 0 2259 152 6 20 chr10 15940016 15940372 -124376393 + THE1B LTR MaLR 14 364 0 1480 195 0 20 chr10 15940546 15940843 -124375922 + AluJo SINE Alu 1 291 -21 2060 125 3 0 chr10 15940901 15941197 -124375568 + AluSq SINE Alu 1 297 -16 2987 53 24 0 chr10 15942243 15942618 -124374147 - L1PA7 LINE L1 -1 6153 5770 39 54 0 32 chr10 15943121 15943214 -124373551 + AT_rich Low_complexity Low_complexity 1 90 0 1860 130 0 17 chr10 15943558 15943858 -124372907 - AluJb SINE Alu -8 304 10 2082 106 0 0 chr10 15943877 15944169 -124372596 - AluSg SINE Alu -18 292 1 2075 127 0 0 chr10 15944590 15944890 -124371875 + AluSx SINE Alu 1 300 -12 3921 119 75 18 chr10 15945391 15946015 -124370750 + PABL_A LTR ERV1 1 660 0 432 187 13 0 chr10 15946222 15946297 -124370468 + MIR SINE MIR 15 90 -172 2179 94 13 0 chr10 15946298 15946596 -124370169 + AluSx SINE Alu 1 302 -10 2082 123 3 3 chr10 15947047 15947357 -124369408 + AluSx SINE Alu 1 310 -2 1883 138 10 7 chr10 15947784 15948075 -124368690 - AluSx SINE Alu -20 292 1 228 241 161 45 chr10 15948148 15948260 -124368505 - L2 LINE L2 -10 3262 3138 3715 89 109 42 chr10 15948709 15949303 -124367462 - MER51A LTR ERV1 0 634 1 2190 102 3 0 chr10 15950318 15950612 -124366153 + AluSx SINE Alu 1 295 -17 1812 141 0 17 chr10 15950886 15951024 -124365741 + AluJo SINE Alu 1 140 -172 2263 93 3 0 chr10 15951024 15951324 -124365441 + AluSp SINE Alu 1 301 -12 1812 141 0 17 chr10 15951324 15951484 -124365281 + AluJo SINE Alu 140 294 -18 444 251 263 6 chr10 15951510 15951689 -124365076 - MIR SINE MIR -15 247 23 1955 122 0 3 chr10 15951787 15952073 -124364692 + AluSx SINE Alu 1 285 -27 317 111 0 0 chr10 15952073 15952118 -124364647 + Alu SINE Alu 251 295 -6 994 128 0 87 chr10 15952118 15952314 -124364451 + AluSg/x SINE Alu 119 297 -13 381 253 78 60 chr10 15952314 15952583 -124364182 + L1ME4a LINE L1 5820 6093 -28 276 130 0 0 chr10 15953361 15953407 -124363358 + (GA)n Simple_repeat Simple_repeat 1 46 0 50 58 0 10 chr10 15953485 15953529 -124363236 + AT_rich Low_complexity Low_complexity 1 44 -58 2366 67 3 0 chr10 15953529 15953826 -124362939 + AluSp SINE Alu 1 298 -15 50 58 0 10 chr10 15953826 15953884 -124362881 + AT_rich Low_complexity Low_complexity 44 102 0 75 51 0 0 chr10 15953906 15954023 -124362742 + AT_rich Low_complexity Low_complexity 1 117 0 619 103 9 95 chr10 15954026 15954142 -124362623 - FLAM_C SINE Alu -11 132 27 1823 133 7 3 chr10 15955130 15955450 -124361315 + AluJb SINE Alu 1 321 0 350 203 0 13 chr10 15955458 15955537 -124361228 - L1 LINE L1 -1494 4652 4575 307 248 66 91 chr10 15955555 15955676 -124361089 - MER5B DNA MER1_type -6 172 55 198 48 24 48 chr10 15955901 15955943 -124360822 + (TTTTC)n Simple_repeat Simple_repeat 1 41 0 198 261 198 0 chr10 15955956 15955992 -124360773 + L2 LINE L2 2915 2943 -329 2121 129 0 0 chr10 15955992 15956301 -124360464 - AluSx SINE Alu -3 309 1 198 261 198 0 chr10 15956301 15956375 -124360390 + L2 LINE L2 2943 3047 -225 331 273 172 16 chr10 15956430 15956665 -124360100 + L2 LINE L2 2828 3127 -186 2183 123 0 0 chr10 15956665 15956974 -124359791 - AluSx SINE Alu -3 309 1 331 273 172 16 chr10 15956974 15957057 -124359708 + L2 LINE L2 3127 3196 -117 331 257 44 9 chr10 15957199 15957312 -124359453 + REP3 LTR ERV 9 125 -437 198 0 0 0 chr10 15957329 15957351 -124359414 + (T)n Simple_repeat Simple_repeat 1 22 0 266 254 71 154 chr10 15957907 15958218 -124358547 + REP3 LTR ERV 178 462 -100 408 20 0 0 chr10 15958409 15958458 -124358307 + (CA)n Simple_repeat Simple_repeat 2 50 0 257 253 229 41 chr10 15959129 15959299 -124357466 - MIR SINE MIR -13 249 48 2011 128 3 0 chr10 15959709 15960021 -124356744 + AluSq SINE Alu 1 313 0 189 0 0 0 chr10 15961521 15961542 -124355223 + (A)n Simple_repeat Simple_repeat 1 21 0 509 97 0 0 chr10 15961856 15961928 -124354837 - MSTB LTR MaLR 0 426 355 2112 127 3 13 chr10 15961928 15962242 -124354523 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 15962271 15962322 -124354443 + AT_rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr10 15962495 15962515 -124354250 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1343 127 0 0 chr10 15962528 15962717 -124354048 - AluSg/x SINE Alu -27 283 95 387 0 0 0 chr10 15962874 15962917 -124353848 + (TA)n Simple_repeat Simple_repeat 2 44 0 2179 104 19 3 chr10 15962921 15963228 -124353537 - AluSx SINE Alu 0 312 1 2085 93 21 3 chr10 15963904 15964193 -124352572 + AluSg SINE Alu 17 310 0 261 0 0 0 chr10 15965142 15965171 -124351594 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 358 289 136 22 chr10 15965191 15965419 -124351346 + L1M4 LINE L1 3505 3758 -2388 1926 135 7 3 chr10 15965420 15965723 -124351042 + AluSx SINE Alu 1 304 -8 3557 244 62 16 chr10 15965747 15967532 -124349233 + L1MC/D LINE L1 1930 3796 -2744 2627 259 41 6 chr10 15967632 15968421 -124348344 + L1MC/D LINE L1 4407 5222 -1318 456 277 93 58 chr10 15968442 15968470 -124348295 + L1MC/D LINE L1 5651 5677 -927 2213 96 0 3 chr10 15968470 15968773 -124347992 + AluSq SINE Alu 1 302 -11 456 277 93 58 chr10 15968773 15969092 -124347673 + L1MC/D LINE L1 5677 6019 -585 1876 227 26 12 chr10 15969114 15969532 -124347233 + Charlie1a DNA MER1_type 2 425 -1030 491 235 181 7 chr10 15969793 15969942 -124346823 + MER5A DNA MER1_type 9 183 -6 1841 149 8 69 chr10 15970166 15970394 -124346371 - MER2 DNA MER2_type 0 344 145 2004 129 0 0 chr10 15970394 15970689 -124346076 + AluSx SINE Alu 5 299 -13 1841 149 8 69 chr10 15970689 15970822 -124345943 - MER2 DNA MER2_type -199 145 5 25 0 0 0 chr10 15971456 15971481 -124345284 + AT_rich Low_complexity Low_complexity 1 25 0 2149 97 3 0 chr10 15971591 15971881 -124344884 - AluSq SINE Alu -22 291 1 744 128 7 68 chr10 15972595 15972638 -124344127 - Charlie1 DNA MER1_type 0 2761 2717 2017 129 0 7 chr10 15972638 15972933 -124343832 - AluY SINE Alu -18 293 1 744 128 7 68 chr10 15972933 15973037 -124343728 - Charlie1 DNA MER1_type -44 2717 2623 679 215 58 70 chr10 15973055 15973227 -124343538 - Charlie1 DNA MER1_type -2590 171 2 2091 87 55 0 chr10 15973480 15973769 -124342996 + AluSc SINE Alu 2 306 -3 299 275 193 23 chr10 15974558 15974729 -124342036 + MIR SINE MIR 62 261 -1 258 194 137 93 chr10 15975234 15975373 -124341392 + MIR3 SINE MIR 2 146 -62 * 455 179 32 11 chr10 15975343 15975438 -124341327 + MIR SINE MIR 116 212 -50 216 0 0 0 chr10 15975843 15975867 -124340898 + (TATG)n Simple_repeat Simple_repeat 3 26 0 347 103 0 17 chr10 15975872 15975930 -124340835 + (TCCCC)n Simple_repeat Simple_repeat 3 59 0 1587 148 15 11 chr10 15975951 15976222 -124340543 - AluJb SINE Alu -39 273 2 1477 264 47 38 chr10 15976237 15976259 -124340506 - L1MEc LINE L1 -4868 1528 1508 1979 142 0 3 chr10 15976259 15976568 -124340197 + AluSx SINE Alu 1 308 -4 1477 264 47 38 chr10 15976568 15976904 -124339861 - L1MEc LINE L1 -4888 1508 1176 2022 142 0 0 chr10 15976904 15977206 -124339559 - AluSx SINE Alu -10 302 1 1477 264 47 38 chr10 15977206 15977680 -124339085 - L1MEc LINE L1 -5220 1176 688 518 298 59 99 chr10 15977668 15978292 -124338473 - L1MEc LINE L1 -5444 761 163 * 473 242 184 0 chr10 15978917 15979107 -124337658 + MIR SINE MIR 37 261 -1 255 245 111 96 chr10 15979141 15979475 -124337290 - L1ME4a LINE L1 -76 6045 5717 1977 173 0 0 chr10 15979475 15979775 -124336990 - AluSx SINE Alu -12 300 1 255 245 111 96 chr10 15979775 15979873 -124336892 - L1ME4a LINE L1 -404 5717 5603 1710 170 7 20 chr10 15979873 15980167 -124336598 - AluJb SINE Alu -22 290 1 255 245 111 96 chr10 15980167 15980202 -124336563 - L1ME4a LINE L1 -518 5603 5570 2445 209 24 14 chr10 15980329 15980836 -124335929 - Charlie1b DNA MER1_type -9 514 3 479 101 0 112 chr10 15981363 15981401 -124335364 + MADE1 DNA Mariner 2 26 -54 2181 120 3 0 chr10 15981401 15981693 -124335072 - AluSx SINE Alu -19 293 1 479 101 0 112 chr10 15981693 15981743 -124335022 + MADE1 DNA Mariner 26 80 0 2031 157 0 0 chr10 15982695 15982994 -124333771 + AluSx SINE Alu 1 299 -13 2212 107 3 0 chr10 15983335 15983675 -124333090 - AluSx SINE Alu 0 312 2 1144 156 69 9 chr10 15983676 15983907 -124332858 + L1MA7 LINE L1 6047 6291 0 2849 269 88 45 chr10 15984780 15985248 -124331517 - L1MCc LINE L1 -4888 1535 1089 2232 87 0 11 chr10 15985248 15985535 -124331230 - AluSq SINE Alu -27 286 3 2849 269 88 45 chr10 15985535 15986426 -124330339 - L1MCc LINE L1 -5334 1089 345 2144 129 3 0 chr10 15986426 15986728 -124330037 + AluSx SINE Alu 1 303 -9 2849 269 88 45 chr10 15986728 15987022 -124329743 - L1MCc LINE L1 -6078 345 65 2081 118 14 0 chr10 15987322 15987619 -124329146 - AluSp SINE Alu -9 304 4 2079 146 10 0 chr10 15987622 15987924 -124328841 - AluJo SINE Alu -7 305 1 289 280 75 9 chr10 15988127 15988234 -124328531 + L2 LINE L2 3118 3231 -41 2401 91 0 0 chr10 15988777 15989073 -124327692 - AluSg SINE Alu -14 296 1 301 48 0 0 chr10 15989090 15989132 -124327633 - L1MA3 LINE L1 0 6305 6264 2541 142 20 65 chr10 15989294 15989803 -124326962 - LTR19A LTR ERV1 0 486 1 2304 59 0 0 chr10 15990251 15990521 -124326244 + AluY SINE Alu 32 301 -10 1533 157 80 11 chr10 15991098 15991372 -124325393 + AluJo SINE Alu 1 293 -19 2254 97 0 7 chr10 15991616 15991905 -124324860 + AluSx SINE Alu 1 287 -25 1701 160 87 47 chr10 15992243 15992533 -124324232 - L1MD1 LINE L1 0 6242 5932 2115 148 0 0 chr10 15992533 15992844 -124323921 + AluSx SINE Alu 1 311 -1 1701 160 87 47 chr10 15992844 15992934 -124323831 - L1MD1 LINE L1 -310 5932 5847 2224 117 3 3 chr10 15993345 15993644 -124323121 - AluSx SINE Alu -13 299 1 4111 104 30 69 chr10 15993771 15994442 -124322323 + L1PB4 LINE L1 5475 6118 -38 2094 108 44 0 chr10 15994442 15994738 -124322027 + AluSx SINE Alu 1 309 -3 4111 104 30 69 chr10 15994738 15994775 -124321990 + L1PB4 LINE L1 6118 6155 -1 2348 60 3 30 chr10 15994906 15995235 -124321530 + AluSp SINE Alu 15 313 0 2319 88 0 7 chr10 15995272 15995567 -124321198 + AluSx SINE Alu 11 303 -9 1687 196 129 39 chr10 15995567 15996000 -124320765 + MLT1E LTR MaLR 122 593 0 2324 101 0 13 chr10 15996068 15996375 -124320390 + AluSg SINE Alu 1 303 -7 2367 69 3 20 chr10 15996384 15996687 -124320078 + AluY SINE Alu 2 299 -12 21 36 0 0 chr10 15996694 15996722 -124320043 + AT_rich Low_complexity Low_complexity 1 28 0 2106 117 17 0 chr10 15996738 15997029 -124319736 + AluSx SINE Alu 2 297 -15 2248 102 7 10 chr10 15997839 15998142 -124318623 + AluSx SINE Alu 1 302 -10 1850 100 4 0 chr10 15998806 15999046 -124317719 + AluSg SINE Alu 62 302 -8 1820 166 13 3 chr10 15999542 15999850 -124316915 + AluJb SINE Alu 1 311 -1 2175 131 0 13 chr10 15999896 16000209 -124316556 - AluSg SINE Alu -1 309 1 800 160 15 0 chr10 16000435 16000566 -124316199 - FLAM_C SINE Alu 0 133 1 2145 122 3 7 chr10 16000989 16001284 -124315481 - AluSx SINE Alu -18 294 1 455 189 102 2 chr10 16001404 16001522 -124315243 - L1MC1 LINE L1 -6 6327 6207 2343 100 3 3 chr10 16001528 16001837 -124314928 - AluSq SINE Alu -4 309 1 2001 144 10 13 chr10 16002692 16002997 -124313768 - AluJo SINE Alu -8 304 1 204 343 14 0 chr10 16003232 16003305 -124313460 + L2 LINE L2 2530 2603 -711 1945 127 3 17 chr10 16003809 16004100 -124312665 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr10 16004302 16004334 -124312431 + (TTG)n Simple_repeat Simple_repeat 2 33 0 489 177 5 48 chr10 16004970 16005062 -124311703 + GA-rich Low_complexity Low_complexity 3 85 -95 1960 101 26 4 chr10 16005062 16005329 -124311436 + AluSq SINE Alu 9 281 -32 489 177 5 48 chr10 16005329 16005422 -124311343 + GA-rich Low_complexity Low_complexity 85 180 0 218 256 0 0 chr10 16005422 16005465 -124311300 + polypurine Low_complexity Low_complexity 2 44 0 536 199 19 6 chr10 16005466 16005627 -124311138 + GA-rich Low_complexity Low_complexity 2 164 0 2209 138 0 0 chr10 16007108 16007420 -124309345 - AluSx SINE Alu 0 312 1 3421 54 42 2 chr10 16007973 16008360 -124308405 + MLT2A1 LTR ERVL 1 408 -36 459 52 0 0 chr10 16008360 16008418 -124308347 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 3421 54 42 2 chr10 16008418 16008457 -124308308 + MLT2A1 LTR ERVL 408 444 0 423 0 0 0 chr10 16008973 16009020 -124307745 + (TA)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr10 16009234 16009259 -124307506 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1879 127 4 4 chr10 16009265 16009533 -124307232 - AluJb SINE Alu -44 268 1 1018 163 0 0 chr10 16009625 16009791 -124306974 - FRAM SINE Alu 0 166 1 215 211 0 0 chr10 16010605 16010643 -124306122 + polypyrimidine Low_complexity Low_complexity 2 39 0 1652 156 31 21 chr10 16011390 16011679 -124305086 + AluJb SINE Alu 5 296 -16 1892 137 25 18 chr10 16012685 16013004 -124303761 + AluJo SINE Alu 1 321 0 3268 201 18 28 chr10 16013513 16013560 -124303205 + L1MB8 LINE L1 5444 5490 -688 2554 64 0 0 chr10 16013560 16013857 -124302908 + AluY SINE Alu 1 297 -14 3268 201 18 28 chr10 16013857 16014481 -124302284 + L1MB8 LINE L1 5490 6110 -68 2169 139 0 0 chr10 16014481 16014790 -124301975 - AluSx SINE Alu -3 309 1 3268 201 18 28 chr10 16014790 16014839 -124301926 + L1MB8 LINE L1 6110 6158 -20 864 238 120 34 chr10 16015510 16015900 -124300865 + MLT1J2 LTR MaLR 28 511 0 1885 156 6 16 chr10 16015921 16016236 -124300529 + AluJo SINE Alu 1 312 0 414 316 40 43 chr10 16016553 16016806 -124299959 + L1 LINE L1 4783 5034 -1112 346 280 70 10 chr10 16016807 16016907 -124299858 + L2 LINE L2 3208 3313 0 647 300 9 26 chr10 16017203 16017334 -124299431 + MIR SINE MIR 34 161 -101 1863 141 7 27 chr10 16017334 16017633 -124299132 + AluJo SINE Alu 1 293 -19 647 300 9 26 chr10 16017633 16017734 -124299031 + MIR SINE MIR 161 262 0 358 231 171 17 chr10 16017785 16017902 -124298863 + L2 LINE L2 3177 3311 -2 357 125 0 0 chr10 16018233 16018289 -124298476 + (CAT)n Simple_repeat Simple_repeat 1 56 0 1068 136 0 0 chr10 16018290 16018466 -124298299 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 945 234 46 38 chr10 16018496 16018735 -124298030 - MIR SINE MIR -21 241 1 226 225 25 12 chr10 16018757 16018837 -124297928 - L1M LINE L1 -2411 5397 5317 2301 94 7 0 chr10 16019919 16020216 -124296549 - AluSp SINE Alu -14 299 1 2367 102 0 3 chr10 16020602 16020906 -124295859 + AluSx SINE Alu 1 303 -9 197 284 30 0 chr10 16021567 16021634 -124295131 - MIR SINE MIR -68 140 72 460 267 26 14 chr10 16021710 16021878 -124294887 + L1MC/D LINE L1 5634 5810 -311 501 67 56 56 chr10 16021891 16021980 -124294785 - LTR9 LTR ERV1 -86 526 438 542 143 105 83 chr10 16022010 16022143 -124294622 + AluJo SINE Alu 1 136 -176 2348 49 7 14 chr10 16022492 16022810 -124293955 - AluY SINE Alu 0 316 1 336 250 12 0 chr10 16023304 16023384 -124293381 - Tigger7 DNA MER2_type 0 2487 2407 1899 151 0 50 chr10 16024224 16024541 -124292224 - AluJo SINE Alu -11 301 1 2211 180 84 0 chr10 16024553 16024970 -124291795 - Tigger7 DNA MER2_type -273 460 9 2421 136 8 8 chr10 16024970 16025344 -124291421 + THE1C LTR MaLR 1 374 -1 2396 78 3 0 chr10 16025475 16025769 -124290996 + AluSg SINE Alu 1 295 -15 2290 99 3 3 chr10 16026891 16027194 -124289571 + AluSq SINE Alu 1 303 -10 729 127 42 35 chr10 16027548 16027690 -124289075 - MLT1A2 LTR MaLR 0 374 232 663 186 28 28 chr10 16027719 16027864 -124288901 - MLT1A2 LTR MaLR -214 151 7 1881 94 17 74 chr10 16028255 16028585 -124288180 - AluSx SINE Alu 0 314 2 190 214 24 0 chr10 16028853 16028895 -124287870 - L2 LINE L2 -223 3049 3007 1914 130 7 10 chr10 16229273 16229581 -124087184 - AluSx SINE Alu -5 307 1 1340 141 38 55 chr10 16230136 16230427 -124086338 + AluSx SINE Alu 1 286 -16 274 132 44 15 chr10 16230743 16230811 -124085954 + L1ME4a LINE L1 5990 6059 -62 549 250 98 27 chr10 16231479 16231653 -124085112 - MIR SINE MIR -29 233 44 1556 161 0 40 chr10 16231653 16231976 -124084789 - AluSx SINE Alu -2 310 1 1676 159 14 7 chr10 16233056 16233364 -124083401 + AluJb SINE Alu 1 312 0 434 306 8 8 chr10 16233581 16233702 -124083063 + MIR3 SINE MIR 41 161 -47 1782 113 32 68 chr10 16233979 16234288 -124082477 - AluSg SINE Alu -12 298 1 2131 115 3 3 chr10 16235577 16235881 -124080884 - AluSq SINE Alu -9 304 1 220 91 45 0 chr10 16237045 16237089 -124079676 + CT-rich Low_complexity Low_complexity 1 46 0 205 304 0 32 chr10 16237143 16237268 -124079497 + T-rich Low_complexity Low_complexity 4 124 0 225 181 14 28 chr10 16237272 16237344 -124079421 + CT-rich Low_complexity Low_complexity 2 72 0 331 262 36 95 chr10 16237457 16237678 -124079087 + L1ME LINE L1 780 987 -5083 2329 90 7 0 chr10 16239324 16239634 -124077131 - AluSq SINE Alu -1 312 1 209 277 0 0 chr10 16239989 16240036 -124076729 - MIR3 SINE MIR -50 158 112 1902 117 0 0 chr10 16241740 16242013 -124074752 - AluSx SINE Alu -1 311 39 327 250 28 40 chr10 16243306 16243482 -124073283 + (CCCCG)n Simple_repeat Simple_repeat 1 174 0 1594 161 28 7 chr10 16243815 16244106 -124072659 + AluJo SINE Alu 1 297 -15 217 270 32 0 chr10 16244833 16244896 -124071869 - L2 LINE L2 -4 3309 3245 706 168 90 0 chr10 16245501 16245656 -124071109 + MER53 DNA DNA 1 169 -20 1160 150 26 30 chr10 16245656 16245889 -124070876 - AluJo SINE Alu -16 296 65 261 178 53 12 chr10 16246384 16246465 -124070300 - AluJo SINE Alu -6 296 246 289 250 15 0 chr10 16246719 16246787 -124069978 - L2 LINE L2 -4 3309 3241 911 166 0 41 chr10 16246876 16247045 -124069720 - AluJo SINE Alu -64 248 87 365 252 50 36 chr10 16247045 16247184 -124069581 - MER5B DNA MER1_type -36 142 2 1912 127 7 3 chr10 16247640 16247924 -124068841 - AluSx SINE Alu -27 285 1 280 263 222 10 chr10 16248145 16248244 -124068521 + MER5A DNA MER1_type 47 166 -23 2707 204 93 30 chr10 16249970 16250100 -124066665 + L1MC3 LINE L1 6994 7114 -671 2229 123 33 36 chr10 16250100 16250465 -124066300 + THE1B LTR MaLR 1 364 0 2707 204 93 30 chr10 16250465 16251079 -124065686 + L1MC3 LINE L1 7114 7785 0 1920 106 31 10 chr10 16251173 16251465 -124065300 + AluSx SINE Alu 1 298 -14 2047 108 3 7 chr10 16252243 16252538 -124064227 - AluSx SINE Alu -13 299 6 353 173 28 123 chr10 16252548 16252754 -124064011 - AluSg SINE Alu -132 168 1 1613 80 13 0 chr10 16253075 16253300 -124063465 + AluSq SINE Alu 86 313 0 182 207 35 86 chr10 16253373 16253431 -124063334 - MER5C DNA MER1_type -267 57 3 385 281 74 7 chr10 16253861 16253996 -124062769 + MIR SINE MIR 7 150 -112 244 86 0 0 chr10 16255141 16255176 -124061589 - AluSx SINE Alu -6 294 260 1500 111 13 9 chr10 16255179 16255405 -124061360 - AluSx SINE Alu -85 227 1 1777 145 11 0 chr10 16256481 16256763 -124060002 + AluJb SINE Alu 3 287 -25 1103 107 0 0 chr10 16257019 16257168 -124059597 + AluSq/x SINE Alu 1 149 -163 441 62 0 62 chr10 16257299 16257390 -124059375 - AluSp/q SINE Alu 0 313 233 874 130 0 0 chr10 16257392 16257523 -124059242 + AluSg/x SINE Alu 170 300 -10 1595 151 34 31 chr10 16257879 16258171 -124058594 + AluJo SINE Alu 3 295 -17 2236 98 3 3 chr10 16258314 16258621 -124058144 - AluSq SINE Alu -6 307 1 180 266 101 25 chr10 16258911 16258990 -124057775 - L3 LINE CR1 -60 1517 1433 2112 107 0 3 chr10 16259319 16259617 -124057148 + AluSx SINE Alu 2 298 -14 1472 181 41 0 chr10 16260295 16260588 -124056177 - AluJo SINE Alu -7 305 1 402 174 0 47 chr10 16260856 16260942 -124055823 - MER74A LTR ERVL 0 558 477 1903 114 24 10 chr10 16260946 16261236 -124055529 + AluSx SINE Alu 1 294 -18 2051 200 37 29 chr10 16261272 16261756 -124055009 - MER74A LTR ERVL -70 488 1 195 259 17 35 chr10 16261815 16261873 -124054892 + MIR3 SINE MIR 119 175 -33 46 45 0 0 chr10 16262702 16262769 -124053996 + AT_rich Low_complexity Low_complexity 1 67 0 2271 86 0 0 chr10 16262784 16263076 -124053689 - AluSq SINE Alu -21 292 1 994 119 11 11 chr10 16263487 16263663 -124053102 - AluSq SINE Alu 0 313 138 3914 93 6 4 chr10 16263829 16264375 -124052390 - L1PB1 LINE L1 -4 6147 5601 917 84 8 0 chr10 16264375 16264499 -124052266 - L1PB1 LINE L1 -1 6150 6019 2293 103 3 0 chr10 16264867 16265179 -124051586 - AluSp SINE Alu 0 313 1 892 189 60 27 chr10 16265763 16266007 -124050758 + MER58B DNA MER1_type 1 327 -14 1942 101 41 0 chr10 16266016 16266284 -124050481 + AluSg SINE Alu 12 290 -20 392 299 143 24 chr10 16266610 16266861 -124049904 - L2 LINE L2 -75 3238 2958 1457 153 4 0 chr10 16266978 16267207 -124049558 - AluJb SINE Alu -82 230 1 254 299 77 60 chr10 16267233 16267350 -124049415 + L2 LINE L2 3151 3269 -3 767 263 10 24 chr10 16267381 16267590 -124049175 - MER3 DNA MER1_type -3 206 1 187 202 107 24 chr10 16267714 16267798 -124048967 + L2 LINE L2 2779 2869 -445 228 290 43 65 chr10 16267848 16267986 -124048779 + L2 LINE L2 2935 3069 -244 1583 189 96 6 chr10 16268017 16268350 -124048415 - MLT1A1 LTR MaLR 0 365 3 342 243 28 117 chr10 16268352 16268538 -124048227 - L1MC5 LINE L1 -62 7899 7751 1549 179 0 17 chr10 16268538 16268839 -124047926 - AluJb SINE Alu -11 301 6 342 243 28 117 chr10 16268839 16268969 -124047796 - L1MC5 LINE L1 -210 7751 7611 344 288 70 62 chr10 16269003 16269260 -124047505 + L2 LINE L2 3051 3309 -4 280 373 0 52 chr10 16269423 16269557 -124047208 - L2 LINE L2 -10 3262 3136 25 0 0 0 chr10 16269605 16269630 -124047135 + AT_rich Low_complexity Low_complexity 1 25 0 240 307 79 74 chr10 16269956 16270145 -124046620 + LTR67 LTR ERVL 102 291 -266 348 209 191 0 chr10 16270176 16270286 -124046479 + LTR67 LTR ERVL 404 534 -23 2226 78 0 66 chr10 16270962 16271296 -124045469 - AluSq SINE Alu -1 312 1 23 0 0 0 chr10 16272344 16272367 -124044398 + AT_rich Low_complexity Low_complexity 1 23 0 2075 129 0 3 chr10 16273114 16273417 -124043348 - AluSx SINE Alu -10 302 1 2013 117 3 25 chr10 16274176 16274493 -124042272 - AluSq SINE Alu -3 310 1 21 36 0 0 chr10 16274597 16274625 -124042140 + AT_rich Low_complexity Low_complexity 1 28 0 2067 120 7 0 chr10 16274977 16275278 -124041487 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 16275728 16275756 -124041009 + AT_rich Low_complexity Low_complexity 1 28 0 1914 80 65 0 chr10 16275757 16276048 -124040717 + AluY SINE Alu 1 308 0 211 365 29 36 chr10 16276336 16276473 -124040292 + MIR SINE MIR 13 148 -114 234 293 57 50 chr10 16276790 16276930 -124039835 + MIR SINE MIR 122 262 0 1707 219 15 55 chr10 16277139 16277239 -124039526 + LTR40b LTR ERVL 3 105 -357 1711 112 3 93 chr10 16277239 16277562 -124039203 - AluSq SINE Alu -19 294 1 1707 219 15 55 chr10 16277562 16277936 -124038829 + LTR40b LTR ERVL 105 458 -4 1163 86 6 12 chr10 16278241 16278403 -124038362 + AluSq SINE Alu 1 161 -152 334 48 0 0 chr10 16278522 16278564 -124038201 - AluY SINE Alu -260 42 1 408 335 11 28 chr10 16278896 16279072 -124037693 - L3 LINE CR1 -156 1421 1249 518 188 0 118 chr10 16280614 16280758 -124036007 - L1ME1 LINE L1 0 6164 6038 256 264 184 75 chr10 16280804 16280978 -124035787 + MIR SINE MIR 30 222 -40 265 240 145 68 chr10 16281437 16281658 -124035107 - L1ME4a LINE L1 -46 6075 5838 527 338 26 22 chr10 16282235 16282463 -124034302 + L1MC/D LINE L1 5435 5663 -2145 2036 122 3 13 chr10 16282953 16283265 -124033500 - AluSg SINE Alu -1 309 1 23 0 0 0 chr10 16283338 16283361 -124033404 + AT_rich Low_complexity Low_complexity 1 23 0 1925 117 3 14 chr10 16283376 16283666 -124033099 - AluJo SINE Alu -25 287 1 682 81 0 0 chr10 16284884 16284983 -124031782 + L1PB2 LINE L1 5925 6023 -128 2033 135 0 0 chr10 16285002 16285305 -124031460 - AluSx SINE Alu -9 303 1 5237 118 28 14 chr10 16285530 16286340 -124030425 - L1PA15 LINE L1 0 6165 5344 2004 128 7 0 chr10 16288431 16288728 -124028037 + AluSx SINE Alu 1 299 -13 2157 100 0 31 chr10 16288746 16289066 -124027699 + AluSg SINE Alu 1 310 0 1607 168 0 39 chr10 16290793 16291102 -124025663 + AluJb SINE Alu 6 302 -10 2093 117 3 0 chr10 16291889 16292188 -124024577 - AluSx SINE Alu -12 300 1 1834 162 0 3 chr10 16292201 16292503 -124024262 - AluSx SINE Alu -11 301 1 509 239 244 38 chr10 16292704 16292917 -124023848 + MIR SINE MIR 6 262 0 1824 157 0 3 chr10 16292942 16293241 -124023524 + AluJb SINE Alu 1 298 -14 1596 128 0 33 chr10 16293254 16293527 -124023238 + L1PA15 LINE L1 5902 6165 0 2129 86 0 20 chr10 16293718 16294021 -124022744 - AluSq SINE Alu -16 297 1 1331 180 90 14 chr10 16294942 16295220 -124021545 + AluJb SINE Alu 2 300 -12 389 290 91 39 chr10 16295296 16295527 -124021238 + MLT1K LTR MaLR 332 574 -14 1936 114 11 0 chr10 16295634 16295906 -124020859 + AluSx SINE Alu 1 275 -37 1243 124 0 0 chr10 16296282 16296459 -124020306 - AluSg/x SINE Alu -2 310 134 2232 99 3 3 chr10 16296459 16296763 -124020002 - AluSx SINE Alu -8 304 1 292 276 29 67 chr10 16296851 16296956 -124019809 - MIR SINE MIR -70 138 38 203 182 0 0 chr10 16297302 16297335 -124019430 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 371 311 0 0 chr10 16297335 16297425 -124019340 + L1MC4 LINE L1 6614 6703 -1339 344 265 24 12 chr10 16297399 16297482 -124019283 + L1MCa LINE L1 1995 2078 -4348 * 1913 116 0 20 chr10 16297537 16297830 -124018935 - AluSx SINE Alu -25 287 1 2144 103 0 20 chr10 16298787 16299089 -124017676 + AluSx SINE Alu 1 296 -16 1548 159 12 40 chr10 16299122 16299443 -124017322 + AluJb SINE Alu 1 312 0 1890 130 0 14 chr10 16300535 16300865 -124015900 + AluJb SINE Alu 1 312 0 1485 170 62 7 chr10 16302467 16302756 -124014009 - AluJo SINE Alu -7 305 1 209 277 117 36 chr10 16302991 16303128 -124013637 + L2 LINE L2 2625 2772 -542 475 255 83 2 chr10 16303257 16303425 -124013340 - MIR SINE MIR -57 151 3 1874 151 0 19 chr10 16303503 16303814 -124012951 - AluJb SINE Alu -7 305 1 239 273 107 33 chr10 16304105 16304226 -124012539 + MIR SINE MIR 112 241 -21 926 179 114 25 chr10 16304401 16304602 -124012163 - MER20 DNA MER1_type 0 219 1 208 281 0 0 chr10 16304733 16304797 -124011968 + CT-rich Low_complexity Low_complexity 1 64 0 1446 196 14 4 chr10 16305523 16305798 -124010967 + AluJo SINE Alu 1 278 -34 192 316 75 30 chr10 16305868 16306001 -124010764 - L2 LINE L2 -581 2733 2595 1161 44 17 17 chr10 16307364 16307413 -124009352 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 1161 44 17 17 chr10 16307413 16307593 -124009172 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1597 144 34 45 chr10 16307677 16307969 -124008796 - AluJo SINE Alu -23 289 1 1392 179 19 0 chr10 16308217 16308485 -124008280 + AluJb SINE Alu 28 300 -12 321 68 0 0 chr10 16308930 16308974 -124007791 + (TG)n Simple_repeat Simple_repeat 2 45 0 1250 211 4 8 chr10 16309019 16309266 -124007499 + AluJb SINE Alu 1 246 -66 234 0 0 0 chr10 16309266 16309292 -124007473 + (A)n Simple_repeat Simple_repeat 1 26 0 230 343 68 41 chr10 16309367 16309513 -124007252 - L2 LINE L2 0 3272 3123 1777 158 7 10 chr10 16310271 16310574 -124006191 + AluJb SINE Alu 1 302 -10 2216 107 0 0 chr10 16311010 16311319 -124005446 + AluSc SINE Alu 1 309 0 492 304 242 29 chr10 16311830 16312445 -124004320 - L2 LINE L2 -479 2835 2090 1839 115 41 0 chr10 16312454 16312760 -124004005 + AluSx SINE Alu 1 317 0 1634 186 0 16 chr10 16312789 16313106 -124003659 - AluJb SINE Alu 0 312 1 37584 70 10 5 chr10 16313615 16318502 -123998263 + L1PA5 LINE L1 11 4919 -1227 3660 50 0 0 chr10 16318502 16318939 -123997826 + L1PA5 LINE L1 5703 6141 -13 2011 112 0 34 chr10 16318976 16319272 -123997493 - AluSx SINE Alu -14 298 13 668 165 46 57 chr10 16319317 16319511 -123997254 + L1MA7 LINE L1 6098 6289 -2 2075 116 7 0 chr10 16319864 16320166 -123996599 - AluSg SINE Alu -6 304 1 1577 198 0 7 chr10 16320371 16320674 -123996091 - AluJo SINE Alu -11 301 1 671 193 91 136 chr10 16320792 16320917 -123995848 - MIR SINE MIR 0 262 154 2002 109 0 24 chr10 16320917 16321211 -123995554 - AluSq SINE Alu -25 288 2 671 193 91 136 chr10 16321211 16321350 -123995415 - MIR SINE MIR -108 154 10 1898 135 3 0 chr10 16321453 16321742 -123995023 - AluSq SINE Alu -21 292 3 2423 198 20 10 chr10 16322018 16322507 -123994258 + L1MB7 LINE L1 5573 6066 -118 200 343 20 49 chr10 16323224 16323326 -123993439 - L2 LINE L2 -186 3086 2988 1757 123 0 0 chr10 16323326 16323570 -123993195 + AluSc SINE Alu 1 244 -65 254 28 0 28 chr10 16323584 16323620 -123993145 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1179 128 0 17 chr10 16323620 16323800 -123992965 + AluSg/x SINE Alu 128 304 -8 2501 138 57 2 chr10 16324607 16325013 -123991752 + MSTA LTR MaLR 1 428 0 194 369 60 7 chr10 16325059 16325208 -123991557 - MIR3 SINE MIR -22 186 30 2059 120 10 0 chr10 16325268 16325569 -123991196 + AluSx SINE Alu 1 304 -8 337 221 0 0 chr10 16325647 16325715 -123991050 - MER82 DNA MER2_type -9 644 577 804 172 13 0 chr10 16325761 16325912 -123990853 - AluSg/x SINE Alu -4 306 154 1948 171 32 16 chr10 16325913 16326282 -123990483 - MER82 DNA MER2_type -278 375 1 572 137 0 20 chr10 16326386 16326488 -123990277 - AluJb SINE Alu 0 312 213 312 298 62 39 chr10 16326606 16326784 -123989981 + L2 LINE L2 2222 2403 -911 183 42 0 0 chr10 16326828 16326852 -123989913 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 1245 199 0 15 chr10 16327261 16327527 -123989238 - AluJo SINE Alu 0 312 51 198 0 0 0 chr10 16328110 16328132 -123988633 + (TG)n Simple_repeat Simple_repeat 2 23 0 1520 161 40 4 chr10 16328132 16328405 -123988360 - AluJo SINE Alu -27 285 3 635 320 86 28 chr10 16328838 16329217 -123987548 - L2 LINE L2 -285 2987 2590 520 276 0 0 chr10 16329644 16329760 -123987005 + MIR SINE MIR 51 166 -96 1970 133 0 3 chr10 16329972 16330274 -123986491 - AluSq SINE Alu -12 301 1 2310 81 3 3 chr10 16330773 16331083 -123985682 - AluY SINE Alu -1 310 1 1624 80 0 61 chr10 16331085 16331397 -123985368 - AluSc SINE Alu -16 293 1 2301 82 3 3 chr10 16332599 16332904 -123983861 + AluSc SINE Alu 1 305 -4 2033 120 0 3 chr10 16333022 16333322 -123983443 - AluSx SINE Alu -13 299 1 918 75 0 0 chr10 16333361 16333481 -123983284 - AluJb SINE Alu -192 120 1 419 235 197 0 chr10 16333669 16333801 -123982964 + MER5A DNA MER1_type 14 171 -18 2211 96 0 13 chr10 16335372 16335684 -123981081 - AluY SINE Alu -3 308 1 1926 127 20 13 chr10 16335686 16335986 -123980779 - AluSx SINE Alu -10 302 1 197 343 67 62 chr10 16335989 16336199 -123980566 + L2 LINE L2 2976 3186 -86 966 82 0 0 chr10 16336611 16336757 -123980008 + (TGGA)n Simple_repeat Simple_repeat 3 148 0 1050 231 9 4 chr10 16336815 16337044 -123979721 + AluJo SINE Alu 1 230 -82 260 54 54 0 chr10 16337044 16337081 -123979684 + AluSx SINE Alu 96 134 -168 1068 130 6 40 chr10 16337113 16337290 -123979475 + AluSx SINE Alu 118 288 -22 28 0 0 0 chr10 16337295 16337323 -123979442 + AT_rich Low_complexity Low_complexity 1 28 0 1959 141 0 0 chr10 16339257 16339547 -123977218 + AluSx SINE Alu 1 290 -22 1728 150 42 0 chr10 16340132 16340418 -123976347 - AluJb SINE Alu -14 298 1 1963 122 26 16 chr10 16340481 16340785 -123975980 + AluSx SINE Alu 3 309 -3 306 295 0 0 chr10 16340908 16340986 -123975779 + (CA)n Simple_repeat Simple_repeat 2 79 0 326 215 29 27 chr10 16341234 16341311 -123975454 - L1MCa LINE L1 -1339 6983 2005 1886 226 46 83 chr10 16341313 16341739 -123975026 + L1ME2 LINE L1 5461 5901 -263 2077 113 7 0 chr10 16341739 16342040 -123974725 + AluSx SINE Alu 8 310 -2 2029 91 0 14 chr10 16342040 16342366 -123974399 + AluSx SINE Alu 1 322 0 1886 226 46 83 chr10 16342366 16342648 -123974117 + L1ME2 LINE L1 5899 6145 -19 239 249 44 105 chr10 16342697 16342926 -123973839 + L1MC4 LINE L1 7826 8040 -2 1840 151 0 0 chr10 16343025 16343316 -123973449 - AluJo SINE Alu -18 294 4 479 281 67 17 chr10 16343983 16344161 -123972604 + MIR SINE MIR 66 252 -10 1502 240 170 29 chr10 16344591 16344970 -123971795 + MLT1E2 LTR MaLR 4 486 -140 1443 215 11 4 chr10 16344970 16345274 -123971491 - AluJb SINE Alu 0 308 3 1502 240 170 29 chr10 16345274 16345439 -123971326 + MLT1E2 LTR MaLR 486 626 0 457 370 14 51 chr10 16345743 16346019 -123970746 - L3 LINE CR1 -463 1114 849 27 62 0 0 chr10 16346133 16346181 -123970584 + AT_rich Low_complexity Low_complexity 1 48 0 2024 112 0 0 chr10 16346459 16346735 -123970030 + AluSx SINE Alu 16 291 -21 1957 99 0 58 chr10 16347477 16347789 -123968976 + AluSx SINE Alu 11 304 -8 2491 160 42 43 chr10 16349600 16350106 -123966659 - MLT1D LTR MaLR 0 505 1 215 337 42 11 chr10 16350123 16350218 -123966547 + MIR3 SINE MIR 94 191 -17 1919 146 10 0 chr10 16350532 16350834 -123965931 + AluSx SINE Alu 1 305 -7 2057 123 3 0 chr10 16351170 16351463 -123965302 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 16351838 16351860 -123964905 + AT_rich Low_complexity Low_complexity 1 22 0 2202 78 0 3 chr10 16351960 16352278 -123964487 + AluY SINE Alu 1 317 0 212 59 29 0 chr10 16354244 16354278 -123962487 + (TA)n Simple_repeat Simple_repeat 1 35 0 213 39 0 0 chr10 16355279 16355305 -123961460 + (T)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr10 16356406 16356435 -123960330 + GC_rich Low_complexity Low_complexity 1 29 0 1951 176 127 9 chr10 16356830 16357263 -123959502 - MER31A LTR ERV1 0 485 2 577 251 23 41 chr10 16357264 16357435 -123959330 - MIR SINE MIR -78 184 17 1935 143 0 13 chr10 16357451 16357766 -123958999 + AluSx SINE Alu 1 311 -1 409 246 45 18 chr10 16358384 16358494 -123958271 - MIR SINE MIR -79 183 71 774 217 37 0 chr10 16358587 16358776 -123957989 + L1MD3 LINE L1 7799 7994 -1 1480 71 20 20 chr10 16358930 16359127 -123957638 - MER107 DNA MER1_type 0 197 1 198 103 0 0 chr10 16359794 16359823 -123956942 + (A)n Simple_repeat Simple_repeat 1 29 0 2292 93 3 0 chr10 16359958 16360259 -123956506 - AluSp SINE Alu -11 302 1 2259 90 7 7 chr10 16360754 16361064 -123955701 - AluSx SINE Alu -2 310 1 2132 128 0 3 chr10 16361412 16361724 -123955041 - AluSx SINE Alu -1 311 1 231 103 0 0 chr10 16361877 16361916 -123954849 + (T)n Simple_repeat Simple_repeat 1 39 0 1544 183 10 17 chr10 16362403 16362693 -123954072 - AluJo SINE Alu -24 288 1 23 0 0 0 chr10 16362850 16362873 -123953892 + AT_rich Low_complexity Low_complexity 1 23 0 1543 174 31 7 chr10 16363299 16363586 -123953179 - AluJo SINE Alu -16 296 3 1854 143 3 7 chr10 16363866 16364167 -123952598 - AluSx SINE Alu -12 300 1 2131 103 3 16 chr10 16364641 16364951 -123951814 - AluSx SINE Alu -6 306 1 1326 164 0 91 chr10 16365317 16365615 -123951150 + AluJo SINE Alu 38 308 -4 590 264 70 70 chr10 16365619 16365861 -123950904 + L2 LINE L2 3050 3291 -22 1192 176 5 0 chr10 16365934 16366150 -123950615 + AluJo SINE Alu 75 291 -21 1656 138 8 4 chr10 16366811 16367071 -123949694 + AluJo SINE Alu 15 275 -37 1914 130 7 10 chr10 16367245 16367553 -123949212 - AluSx SINE Alu -5 307 1 2075 120 0 7 chr10 16368108 16368409 -123948356 + AluSx SINE Alu 1 299 -13 2398 71 3 0 chr10 16368579 16368888 -123947877 - AluY SINE Alu -1 310 1 1126 277 108 42 chr10 16369248 16369778 -123946987 + MLT1K LTR MaLR 2 566 -22 1400 168 0 4 chr10 16369978 16370216 -123946549 + AluJo SINE Alu 1 237 -75 1557 124 81 42 chr10 16370421 16370704 -123946061 - AluJb SINE Alu -18 294 1 1696 138 7 21 chr10 16371675 16371965 -123944800 + AluJo SINE Alu 9 294 -18 930 175 12 6 chr10 16372641 16372801 -123943964 + FRAM SINE Alu 5 165 -1 1510 169 4 4 chr10 16372948 16373208 -123943557 + AluJb SINE Alu 1 260 -52 2042 100 0 17 chr10 16373393 16373724 -123943041 - AluSq SINE Alu 0 326 1 228 203 101 38 chr10 16373830 16373909 -123942856 + MIR SINE MIR 63 146 -116 889 230 0 0 chr10 16373909 16374074 -123942691 + FAM SINE Alu 1 165 -10 1953 120 0 17 chr10 16374074 16374375 -123942390 - AluSx SINE Alu -16 296 1 371 174 90 35 chr10 16374376 16374501 -123942264 - MER106B DNA MER1_type -96 963 6 1586 132 0 97 chr10 16374665 16374976 -123941789 + AluJb SINE Alu 2 282 -30 893 9 0 9 chr10 16374977 16375084 -123941681 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 954 228 19 14 chr10 16375283 16375308 -123941457 - MLT2C1 LTR ERVL -156 258 235 2439 62 3 0 chr10 16375308 16375612 -123941153 - AluY SINE Alu -6 305 1 954 228 19 14 chr10 16375612 16375837 -123940928 - MLT2C1 LTR ERVL -179 235 4 2860 211 37 31 chr10 16375837 16376139 -123940626 - ERVL LTR ERVL -4 5650 5351 1681 150 50 7 chr10 16376139 16376439 -123940326 + AluSq SINE Alu 1 313 0 2860 211 37 31 chr10 16376439 16376933 -123939832 - ERVL LTR ERVL -303 5351 4881 673 255 55 0 chr10 16376925 16377070 -123939695 + HERV16 LTR ERVL 536 688 -4308 * 2169 101 3 0 chr10 16377303 16377599 -123939166 - AluSx SINE Alu -15 297 1 186 143 0 0 chr10 16377837 16377872 -123938893 + (TTC)n Simple_repeat Simple_repeat 2 36 0 793 108 63 1 chr10 16377921 16378056 -123938709 - L1PA8 LINE L1 -269 5897 5751 27 49 0 0 chr10 16378157 16378198 -123938567 + AT_rich Low_complexity Low_complexity 1 41 0 819 191 13 0 chr10 16379062 16379214 -123937551 - AluY SINE Alu -23 288 135 363 261 53 100 chr10 16379272 16379652 -123937113 + L1ME4a LINE L1 5728 6089 -32 1578 170 40 0 chr10 16379724 16380001 -123936764 + AluJb SINE Alu 1 288 -24 243 0 0 0 chr10 16380009 16380036 -123936729 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 451 347 63 8 chr10 16380277 16380516 -123936249 + L1ME1 LINE L1 5355 5606 -515 415 259 113 18 chr10 16380609 16380864 -123935901 + L1ME1 LINE L1 5679 5946 -224 251 174 0 0 chr10 16380871 16380917 -123935848 - MLT2C1 LTR ERVL -7 390 345 1392 204 142 50 chr10 16380944 16381381 -123935384 - MLT2B1 LTR ERVL -43 477 1 261 0 0 0 chr10 16381390 16381432 -123935333 + (TG)n Simple_repeat Simple_repeat 1 71 0 261 0 0 0 chr10 16381432 16381461 -123935304 + (TG)n Simple_repeat Simple_repeat 2 30 0 1809 114 33 0 chr10 16381670 16381992 -123934773 + AluSg SINE Alu 1 331 0 308 183 28 28 chr10 16382083 16382154 -123934611 + L1ME4a LINE L1 6047 6117 -4 2032 128 30 0 chr10 16382573 16382870 -123933895 + AluY SINE Alu 1 306 -5 207 0 0 0 chr10 16383024 16383047 -123933718 + (TC)n Simple_repeat Simple_repeat 2 24 0 258 32 0 0 chr10 16383049 16383080 -123933685 + (CA)n Simple_repeat Simple_repeat 1 31 0 16409 165 40 19 chr10 16383109 16385636 -123931129 + L1MA2 LINE L1 15 2487 -5236 2724 129 0 17 chr10 16385636 16386048 -123930717 + L1PA13 LINE L1 5759 6163 0 16409 165 40 19 chr10 16386048 16387979 -123928786 + L1MA2 LINE L1 2487 4376 -3347 2498 69 0 0 chr10 16387979 16388283 -123928482 - AluY SINE Alu -7 304 1 16409 165 40 19 chr10 16388283 16391020 -123925745 + L1MA2 LINE L1 4376 7723 0 244 236 18 0 chr10 16391362 16391417 -123925348 - L1MEd LINE L1 -5473 646 591 322 232 80 73 chr10 16391738 16391889 -123924876 - L1MEd LINE L1 -5966 153 2 339 363 66 6 chr10 16392405 16392587 -123924178 + MIR3 SINE MIR 15 207 -1 2219 93 3 7 chr10 16392747 16393038 -123923727 - AluSg SINE Alu -20 290 1 1464 155 0 74 chr10 16393121 16393392 -123923373 - AluJo SINE Alu -27 285 35 223 325 25 12 chr10 16393419 16393499 -123923266 - L2 LINE L2 -2 3311 3231 244 224 34 22 chr10 16393915 16394048 -123922717 + MIR SINE MIR 2 185 -77 1921 215 24 19 chr10 16394338 16394836 -123921929 + L1P LINE L1 4793 5293 -858 207 0 0 0 chr10 16394979 16395002 -123921763 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 829 250 2 9 chr10 16395002 16395202 -123921563 - L1PB4 LINE L1 -14 6142 5944 2338 106 0 0 chr10 16395202 16395505 -123921260 + AluSx SINE Alu 2 304 -8 1786 117 92 7 chr10 16396946 16397228 -123919537 + AluSx SINE Alu 7 312 0 2161 186 5 18 chr10 16397591 16397983 -123918782 - MLT1B LTR MaLR -2 388 2 2361 92 0 16 chr10 16397993 16398298 -123918467 + AluSx SINE Alu 1 300 -12 275 350 51 0 chr10 16398339 16398456 -123918309 - MIR3 SINE MIR -7 201 79 3264 106 34 61 chr10 16399144 16399190 -123917575 - MER75 DNA T2_type 0 514 468 2151 137 3 13 chr10 16399190 16399209 -123917556 - AluSx SINE Alu 0 312 294 180 0 0 0 chr10 16399209 16399229 -123917536 + (TA)n Simple_repeat Simple_repeat 1 20 0 2151 137 3 13 chr10 16399229 16399524 -123917241 - AluSx SINE Alu -18 294 1 3264 106 34 61 chr10 16399524 16399613 -123917152 - MER75 DNA T2_type -46 468 378 2355 81 7 13 chr10 16399613 16399921 -123916844 + AluSq SINE Alu 1 306 -7 3264 106 34 61 chr10 16399921 16400311 -123916454 - MER75 DNA T2_type -136 378 2 569 274 81 38 chr10 16401095 16401464 -123915301 + L1ME LINE L1 1324 1708 -4688 * 1962 263 52 61 chr10 16401463 16401775 -123914990 + L1ME LINE L1 3281 3594 -2621 2304 86 3 3 chr10 16401775 16402076 -123914689 + AluY SINE Alu 1 301 -10 1962 263 52 61 chr10 16402076 16402810 -123913955 + L1ME LINE L1 3594 4318 -1897 275 180 40 0 chr10 16402965 16403015 -123913750 - AluJb SINE Alu -10 292 241 2276 130 54 25 chr10 16403015 16403369 -123913396 + THE1B LTR MaLR 1 364 0 1454 171 0 28 chr10 16403369 16403621 -123913144 - AluJb SINE Alu -67 245 1 665 258 45 93 chr10 16403688 16404064 -123912701 + L1ME LINE L1 5334 5691 -542 3618 178 13 5 chr10 16404926 16405526 -123911239 + MER6A DNA MER2_type 1 605 0 1473 179 0 37 chr10 16405769 16406042 -123910723 - AluJb SINE Alu -49 263 1 1042 176 24 4 chr10 16406495 16406777 -123909988 + L1MB4 LINE L1 5175 5468 -712 3738 63 0 0 chr10 16406777 16407221 -123909544 - L1PA7 LINE L1 -2 6152 5709 3616 162 36 40 chr10 16407221 16407944 -123908821 + L1MB4 LINE L1 5460 6180 0 266 241 36 0 chr10 16408155 16408238 -123908527 - MER114 LTR ERV 0 648 563 676 181 52 0 chr10 16408241 16408357 -123908408 + FLAM_A SINE Alu 13 134 -8 1375 174 103 116 chr10 16408359 16408555 -123908210 - MER114 LTR ERV -88 560 363 1694 174 14 7 chr10 16408555 16408842 -123907923 + AluJb SINE Alu 1 289 -23 1375 174 103 116 chr10 16408842 16409208 -123907557 - MER114 LTR ERV -285 363 5 25 65 0 0 chr10 16409252 16409298 -123907467 + AT_rich Low_complexity Low_complexity 1 46 0 577 145 0 0 chr10 16409367 16409450 -123907315 + AluSg/x SINE Alu 215 297 -15 22 35 0 0 chr10 16409623 16409652 -123907113 + AT_rich Low_complexity Low_complexity 1 29 0 1772 109 8 19 chr10 16409658 16409924 -123906841 - AluSg SINE Alu -11 299 37 228 167 21 42 chr10 16409928 16409976 -123906789 - MER94 DNA DNA -87 47 1 553 260 12 24 chr10 16409977 16410146 -123906619 + L1ME LINE L1 5685 5851 -380 215 179 0 0 chr10 16410146 16410185 -123906580 + MER5B DNA MER1_type 9 47 -131 4764 107 283 108 chr10 16410220 16411678 -123905087 - pTR5 LTR ERV1 0 2438 62 544 108 0 0 chr10 16412355 16412429 -123904336 - MADE1 DNA Mariner -1 79 6 389 250 164 0 chr10 16412641 16412757 -123904008 - MER63 DNA MER1_type -300 762 2 332 329 82 18 chr10 16413831 16414050 -123902715 - L1MC4a LINE L1 -255 5915 5683 2909 0 0 0 chr10 16414127 16414434 -123902331 + AluYa5 SINE Alu 1 307 -4 834 89 32 0 chr10 16414600 16414724 -123902041 - AluSq/x SINE Alu -184 128 1 2793 17 0 0 chr10 16414754 16415055 -123901710 - AluYa5 SINE Alu -10 301 1 435 78 188 0 chr10 16415078 16415142 -123901623 - MADE1 DNA Mariner -3 77 2 256 188 25 88 chr10 16416704 16416784 -123899981 + MER5A DNA MER1_type 114 188 -1 1980 100 64 4 chr10 16416863 16417143 -123899622 + AluSc SINE Alu 1 297 -12 2151 132 0 0 chr10 16417191 16417487 -123899278 + AluSx SINE Alu 1 296 -16 226 239 0 0 chr10 16417616 16417662 -123899103 - Charlie8 DNA MER1_type -6 2411 2366 1742 193 0 7 chr10 16418211 16418517 -123898248 - AluJb SINE Alu -8 304 1 2324 96 0 3 chr10 16418640 16418942 -123897823 - AluSx SINE Alu -11 301 1 801 248 86 0 chr10 16419063 16419285 -123897480 - MIR SINE MIR -4 258 18 664 290 95 12 chr10 16419761 16420152 -123896613 - L1MC4a LINE L1 -481 5681 5255 1795 155 7 0 chr10 16420194 16420471 -123896294 + AluSx SINE Alu 1 279 -33 911 234 56 14 chr10 16420513 16420727 -123896038 + MIR SINE MIR 16 238 -24 1459 206 7 14 chr10 16420849 16421136 -123895629 - AluJo SINE Alu -27 285 1 592 233 70 38 chr10 16421320 16421567 -123895198 - HERVL LTR ERVL -1138 4347 4107 440 292 0 9 chr10 16421595 16421708 -123895057 + LTR33 LTR ERVL 108 219 -302 2343 104 7 0 chr10 16422655 16422962 -123893803 + AluSx SINE Alu 1 309 -3 393 331 45 19 chr10 16423304 16423461 -123893304 + L2 LINE L2 3153 3313 0 1751 195 126 29 chr10 16423587 16424039 -123892726 + MLT1D LTR MaLR 1 496 -9 316 236 72 40 chr10 16424264 16424486 -123892279 + MLT1K LTR MaLR 280 540 -48 2665 137 34 5 chr10 16424587 16425003 -123891762 + MSTA LTR MaLR 1 428 0 593 297 84 4 chr10 16425606 16425869 -123890896 - MER102a DNA MER1_type -6 324 41 1595 153 28 17 chr10 16426590 16426877 -123889888 - L1MB3 LINE L1 -1 6182 5893 2140 121 0 0 chr10 16426888 16427178 -123889587 + AluSx SINE Alu 1 290 -22 316 314 0 10 chr10 16427205 16427307 -123889458 - L2 LINE L2 0 3313 3213 435 331 115 22 chr10 16427363 16427389 -123889376 - L2 LINE L2 -963 2351 2329 1809 145 39 0 chr10 16427389 16427671 -123889094 + AluSx SINE Alu 1 293 -19 435 331 115 22 chr10 16427671 16428000 -123888765 - L2 LINE L2 -985 2329 1963 796 95 0 9 chr10 16428082 16428187 -123888578 - FLAM_C SINE Alu -19 124 21 433 284 87 84 chr10 16429245 16429590 -123887175 - MLT1H LTR MaLR -201 348 3 255 31 0 0 chr10 16430018 16430050 -123886715 + (TC)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 16430049 16430074 -123886691 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 2528 96 61 9 chr10 16430850 16431195 -123885570 - THE1B LTR MaLR -1 363 1 279 297 47 39 chr10 16431530 16431658 -123885107 + MIR SINE MIR 19 147 -115 1882 185 62 36 chr10 16431669 16432118 -123884647 + MER31B LTR ERV1 1 461 -5 235 343 29 19 chr10 16432122 16432227 -123884538 + MIR SINE MIR 154 259 -3 2529 71 3 0 chr10 16432235 16432545 -123884220 - AluY SINE Alu 0 311 1 302 368 65 0 chr10 16432607 16432762 -123884003 - L3 LINE CR1 -286 1291 1127 275 327 212 18 chr10 16433181 16433398 -123883367 - L3 LINE CR1 -827 750 492 928 178 12 12 chr10 16433712 16433875 -123882890 - FRAM SINE Alu -13 163 1 1740 182 65 56 chr10 16433899 16434361 -123882404 + MLT1C LTR MaLR 1 466 -1 2204 109 0 13 chr10 16434659 16434961 -123881804 + AluSx SINE Alu 1 298 -14 1711 123 4 4 chr10 16435835 16436070 -123880695 + AluSx SINE Alu 1 235 -77 1403 167 0 28 chr10 16436070 16436321 -123880444 - AluJo SINE Alu -68 244 1 27 49 0 0 chr10 16436542 16436583 -123880182 + AT_rich Low_complexity Low_complexity 1 41 0 304 279 27 99 chr10 16436686 16436822 -123879943 + L1ME LINE L1 5580 5695 -426 1713 147 42 3 chr10 16436822 16437107 -123879658 - AluJo SINE Alu -10 302 7 304 279 27 99 chr10 16437107 16437192 -123879573 + L1ME LINE L1 5695 5785 -336 395 211 13 92 chr10 16437628 16437719 -123879046 - L1MB8 LINE L1 -1 6177 6080 210 37 0 0 chr10 16437719 16437746 -123879019 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2181 90 18 0 chr10 16437746 16438024 -123878741 - AluSg SINE Alu -27 283 1 395 211 13 92 chr10 16438024 16438083 -123878682 - L1MB8 LINE L1 -96 6082 6038 2282 109 0 10 chr10 16438669 16438982 -123877783 - AluSx SINE Alu 0 312 3 2167 108 3 7 chr10 16441610 16441905 -123874860 - AluSx SINE Alu -18 294 1 468 231 186 13 chr10 16444123 16444279 -123872486 - MIR3 SINE MIR -1 207 25 1901 138 4 4 chr10 16444412 16444688 -123872077 + AluSx SINE Alu 1 276 -36 2046 135 0 16 chr10 16445299 16445603 -123871162 - AluSx SINE Alu -11 301 3 2200 139 44 13 chr10 16446136 16446523 -123870242 + L1MA4 LINE L1 5897 6295 -5 189 286 0 0 chr10 16446734 16446783 -123869982 - L3 LINE CR1 -3 1574 1526 2109 120 3 17 chr10 16447011 16447311 -123869454 + AluSx SINE Alu 1 296 -16 2123 111 0 66 chr10 16447909 16448241 -123868524 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 16449278 16449299 -123867466 + AT_rich Low_complexity Low_complexity 1 21 0 1094 139 0 0 chr10 16449302 16449453 -123867312 - FRAM SINE Alu -24 152 2 592 143 0 159 chr10 16449562 16449642 -123867123 - Charlie5 DNA MER1_type 0 2624 2589 2340 88 3 13 chr10 16449642 16449950 -123866815 + AluSx SINE Alu 1 305 -7 592 143 0 159 chr10 16449950 16450058 -123866707 - Charlie5 DNA MER1_type -35 2589 2466 497 154 138 0 chr10 16450098 16450221 -123866544 - Charlie5 DNA MER1_type -121 2491 2352 * 600 192 34 41 chr10 16450220 16450366 -123866399 - Charlie5 DNA MER1_type -2413 199 55 2212 111 3 0 chr10 16450460 16450757 -123866008 - AluSp SINE Alu -15 298 1 1988 116 3 66 chr10 16452188 16452507 -123864258 - AluJb SINE Alu -3 309 11 761 116 27 7 chr10 16453216 16453362 -123863403 + CT-rich Low_complexity Low_complexity 1 149 0 592 178 76 8 chr10 16453362 16453480 -123863285 - FRAM SINE Alu 0 40 1 295 274 173 34 chr10 16453564 16453743 -123863022 - MIR SINE MIR -12 250 47 312 257 85 55 chr10 16453798 16453966 -123862799 + MER5A DNA MER1_type 6 187 -2 395 281 183 0 chr10 16454090 16454243 -123862522 - MER5A DNA MER1_type 0 189 9 2300 97 13 0 chr10 16454547 16454845 -123861920 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr10 16455446 16455481 -123861284 + AT_rich Low_complexity Low_complexity 1 35 0 387 208 0 0 chr10 16455592 16455712 -123861053 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 2102 118 0 23 chr10 16455937 16456242 -123860523 + AluSq SINE Alu 1 298 -15 853 197 66 38 chr10 16456278 16456430 -123860335 - MER20 DNA MER1_type 0 219 58 2154 101 37 3 chr10 16456430 16456728 -123860037 + AluSg SINE Alu 1 308 -2 853 197 66 38 chr10 16456728 16456788 -123859977 - MER20 DNA MER1_type -161 58 1 1726 175 97 27 chr10 16456973 16457374 -123859391 - MER63B DNA MER1_type -7 429 1 2178 115 0 10 chr10 16458195 16458491 -123858274 - AluSx SINE Alu -19 293 1 181 275 0 0 chr10 16458550 16458590 -123858175 - MER5A DNA MER1_type -71 118 79 4252 127 70 58 chr10 16459068 16460472 -123856293 + pTR5 LTR ERV1 743 2606 0 1403 211 68 0 chr10 16462117 16462238 -123854527 + AluJo SINE Alu 1 112 -200 183 42 0 0 chr10 16462238 16462262 -123854503 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1403 211 68 0 chr10 16462262 16462420 -123854345 + AluJo SINE Alu 112 299 -13 2355 103 3 0 chr10 16462512 16462813 -123853952 + AluSx SINE Alu 1 302 -10 356 37 0 19 chr10 16462889 16462943 -123853822 + L1PA3 LINE L1 6103 6155 0 234 0 0 0 chr10 16463235 16463261 -123853504 + (T)n Simple_repeat Simple_repeat 1 26 0 2732 133 18 13 chr10 16463935 16464085 -123852680 - L1MA4 LINE L1 -2 6298 6150 2285 108 61 0 chr10 16464085 16464428 -123852337 + THE1B LTR MaLR 1 364 0 2732 133 18 13 chr10 16464428 16464730 -123852035 - L1MA4 LINE L1 -150 6150 5844 897 196 68 96 chr10 16465071 16465436 -123851329 + MER66A LTR ERV1 97 336 -142 510 169 0 0 chr10 16465555 16465632 -123851133 + MER66A LTR ERV1 402 478 0 756 234 62 0 chr10 16466533 16466725 -123850040 + MER3 DNA MER1_type 1 204 -5 618 249 22 27 chr10 16466982 16467167 -123849598 + MIR SINE MIR 63 246 -16 305 281 185 7 chr10 16467370 16467516 -123849249 - MIR3 SINE MIR -5 203 32 278 116 0 0 chr10 16467728 16467771 -123848994 + MLT1F LTR MaLR 339 381 -161 1471 203 57 91 chr10 16468010 16468294 -123848471 + MLT1C LTR MaLR 7 299 -168 1619 193 0 11 chr10 16468294 16468579 -123848186 + AluJo SINE Alu 1 282 -30 216 23 0 68 chr10 16468582 16468626 -123848139 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 1471 203 57 91 chr10 16468626 16468811 -123847954 + MLT1C LTR MaLR 301 464 -3 2098 210 92 8 chr10 16468936 16469436 -123847329 + MLT1F LTR MaLR 1 542 0 608 275 132 11 chr10 16469438 16469718 -123847047 + L2 LINE L2 2345 2658 -656 308 238 161 30 chr10 16469954 16470122 -123846643 - L1ME3A LINE L1 -219 5951 5762 741 259 111 58 chr10 16470263 16470676 -123846089 + L2 LINE L2 2879 3313 0 1032 211 28 0 chr10 16470736 16470949 -123845816 + MER20 DNA MER1_type 1 219 0 434 147 22 21 chr10 16470956 16471172 -123845593 + GA-rich Low_complexity Low_complexity 1 216 0 2110 140 0 7 chr10 16471571 16471878 -123844887 + AluSg SINE Alu 1 305 -5 23 92 0 0 chr10 16472305 16472370 -123844395 + AT_rich Low_complexity Low_complexity 1 65 0 1645 164 0 4 chr10 16472380 16472642 -123844123 - AluSx SINE Alu -19 293 33 2466 97 0 0 chr10 16473483 16473792 -123842973 - AluSq SINE Alu -4 309 1 2104 127 41 39 chr10 16474246 16474609 -123842156 + THE1B LTR MaLR 1 364 0 2257 90 0 7 chr10 16476415 16476715 -123840050 - AluY SINE Alu -9 302 5 2274 66 0 3 chr10 16476819 16477106 -123839659 - L1PA7 LINE L1 -3 6151 5866 1991 149 0 3 chr10 16477256 16477551 -123839214 + AluSx SINE Alu 1 294 -18 2322 122 0 0 chr10 16478356 16478668 -123838097 - AluSx SINE Alu 0 312 1 451 100 0 0 chr10 16479308 16479368 -123837397 + Alu SINE Alu 2 61 -257 755 129 0 0 chr10 16479725 16479841 -123836924 - L1MB3 LINE L1 -40 6143 6028 2100 114 28 3 chr10 16479946 16480236 -123836529 + AluSq SINE Alu 1 297 -16 303 28 0 0 chr10 16480946 16480982 -123835783 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 626 173 140 39 chr10 16480983 16481162 -123835603 - MSTA LTR MaLR -51 377 181 2188 51 0 8 chr10 16481929 16482186 -123834579 - AluY SINE Alu -18 293 39 2324 91 7 10 chr10 16482246 16482555 -123834210 - AluSx SINE Alu -4 308 1 273 145 16 0 chr10 16482792 16482854 -123833911 - L1MA3 LINE L1 -1 6304 6242 1124 125 42 5 chr10 16482954 16483146 -123833619 - L1MA3 LINE L1 -91 6214 6016 2076 148 3 0 chr10 16483398 16483695 -123833070 + AluSx SINE Alu 1 298 -14 826 127 0 45 chr10 16483818 16483952 -123832813 - FLAM_C SINE Alu -5 128 1 361 351 39 39 chr10 16485763 16485959 -123830806 - L2 LINE L2 -1207 2107 1912 2550 83 0 3 chr10 16485959 16486298 -123830467 + L1PA10 LINE L1 5828 6165 -3 361 351 39 39 chr10 16486298 16486312 -123830453 - L2 LINE L2 -1402 1912 1899 1641 167 20 20 chr10 16486312 16486611 -123830154 + AluJo SINE Alu 14 312 0 361 351 39 39 chr10 16486611 16486684 -123830081 - L2 LINE L2 -1414 1900 1823 457 293 93 53 chr10 16486790 16487165 -123829600 + L1ME4a LINE L1 5661 6050 -71 1312 229 70 3 chr10 16487207 16487491 -123829274 - AluJo SINE Alu -9 303 1 405 58 0 0 chr10 16487511 16487563 -123829202 + (TA)n Simple_repeat Simple_repeat 1 52 0 282 293 111 43 chr10 16487755 16487963 -123828802 - L2 LINE L2 -1480 1834 1613 2058 135 24 34 chr10 16488085 16488464 -123828301 - THE1C LTR MaLR 0 375 1 2386 148 23 26 chr10 16489153 16489580 -123827185 + MSTB LTR MaLR 1 426 0 2067 114 7 16 chr10 16489934 16490240 -123826525 + AluSx SINE Alu 1 303 -9 240 35 0 0 chr10 16491660 16491689 -123825076 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1153 244 7 19 chr10 16491889 16492196 -123824569 - AluSq SINE Alu 0 303 1 1681 186 3 35 chr10 16492904 16493216 -123823549 - AluJo SINE Alu -10 302 1 597 138 0 21 chr10 16494586 16494680 -123822085 - FLAM_A SINE Alu -19 123 32 2503 80 0 6 chr10 16495319 16495633 -123821132 + AluSq SINE Alu 1 312 -1 181 111 67 0 chr10 16498870 16498915 -123817850 + A-rich Low_complexity Low_complexity 2 49 0 762 177 0 0 chr10 16498985 16499115 -123817650 - FLAM_C SINE Alu -3 130 1 2283 92 0 0 chr10 16499388 16499680 -123817085 - AluSc SINE Alu -15 294 3 27 29 0 0 chr10 16499684 16499718 -123817047 + AT_rich Low_complexity Low_complexity 1 34 0 1759 153 0 4 chr10 16500122 16500410 -123816355 + AluJb SINE Alu 23 309 0 351 44 0 0 chr10 16500934 16500979 -123815786 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 16501398 16501420 -123815345 + AT_rich Low_complexity Low_complexity 1 22 0 241 267 0 0 chr10 16501642 16501702 -123815063 + MIR SINE MIR 90 149 -113 262 266 9 46 chr10 16502258 16502367 -123814398 - MIR3 SINE MIR 0 208 104 2804 160 63 21 chr10 16502942 16503516 -123813249 - L1MD1 LINE L1 0 6242 5645 22 0 0 0 chr10 16503977 16503999 -123812766 + AT_rich Low_complexity Low_complexity 1 22 0 1296 228 72 62 chr10 16504687 16505398 -123811367 + L1ME1 LINE L1 2804 3521 -2625 1759 252 22 7 chr10 16505410 16505950 -123810815 + L1ME1 LINE L1 3626 4173 -1973 1253 252 64 88 chr10 16505976 16506536 -123810229 + MER77 LTR ERV1 53 599 -6 379 227 62 23 chr10 16506621 16506749 -123810016 + L1ME1 LINE L1 4171 4303 -1843 2512 217 81 37 chr10 16506799 16506950 -123809815 + L1ME1 LINE L1 4787 4930 -1236 2029 161 0 0 chr10 16506950 16507260 -123809505 + AluJo SINE Alu 1 310 -2 2512 217 81 37 chr10 16507260 16508084 -123808681 + L1ME1 LINE L1 4930 5845 -321 3429 53 2 2 chr10 16508084 16508516 -123808249 + L1PA7 LINE L1 5719 6150 -4 2512 217 81 37 chr10 16508516 16508848 -123807917 + L1ME1 LINE L1 5845 6161 -5 2011 131 0 0 chr10 16509008 16509283 -123807482 + AluSx SINE Alu 1 275 -37 252 0 0 0 chr10 16509290 16509318 -123807447 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 843 284 72 40 chr10 16509319 16509764 -123807001 + L1ME3A LINE L1 5322 5792 -378 1893 105 63 14 chr10 16509764 16510050 -123806715 + AluSx SINE Alu 1 300 -12 843 284 72 40 chr10 16510050 16510202 -123806563 + L1ME3A LINE L1 5792 5938 -232 346 268 133 4 chr10 16510215 16510358 -123806407 + MIR SINE MIR 2 172 -36 2472 94 0 0 chr10 16511043 16511351 -123805414 - AluSq SINE Alu -4 309 2 1988 113 3 69 chr10 16511920 16512238 -123804527 - AluSx SINE Alu -15 297 1 1147 66 0 0 chr10 16512423 16512559 -123804206 - AluSc SINE Alu -173 136 1 2243 121 0 0 chr10 16515103 16515401 -123801364 - AluSx SINE Alu -14 298 1 405 0 0 0 chr10 16516744 16516789 -123799976 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 258 32 0 0 chr10 16517932 16517963 -123798802 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1562 191 49 0 chr10 16517963 16518230 -123798535 - AluJb SINE Alu -32 280 1 608 311 31 13 chr10 16518668 16518896 -123797869 - MIR SINE MIR -25 237 6 211 336 91 0 chr10 16518997 16519107 -123797658 - MIR SINE MIR -7 255 136 2186 123 0 0 chr10 16519179 16519479 -123797286 - AluSg SINE Alu -10 300 1 185 317 98 0 chr10 16519748 16519830 -123796935 + L2 LINE L2 3208 3297 -16 2205 110 3 10 chr10 16519839 16520139 -123796626 + AluSg SINE Alu 1 298 -12 2018 103 53 0 chr10 16521123 16521405 -123795360 + AluSp SINE Alu 1 297 -16 579 290 85 0 chr10 16521600 16521776 -123794989 + MIR SINE MIR 21 211 -51 24 32 0 0 chr10 16523663 16523694 -123793071 + AT_rich Low_complexity Low_complexity 1 31 0 268 277 121 12 chr10 16523871 16523954 -123792811 + L2 LINE L2 3193 3284 -29 186 208 62 0 chr10 16524683 16524731 -123792034 - L2 LINE L2 -1 3312 3262 271 214 29 29 chr10 16524871 16524941 -123791824 - L2 LINE L2 -188 3084 3015 440 283 92 69 chr10 16524958 16524981 -123791784 + MIR SINE MIR 13 34 -228 2078 124 0 0 chr10 16524981 16525294 -123791471 + AluSx SINE Alu 4 316 0 440 283 92 69 chr10 16525294 16525442 -123791323 + MIR SINE MIR 34 189 -73 1109 38 0 0 chr10 16525458 16525590 -123791175 - L1PA5 LINE L1 -8 6146 6015 189 297 62 0 chr10 16525602 16525666 -123791099 + MIR SINE MIR 187 254 -8 483 300 111 12 chr10 16525891 16526144 -123790621 - L2 LINE L2 -471 2843 2566 2153 125 13 0 chr10 16526297 16526600 -123790165 + AluSx SINE Alu 1 307 -5 1193 174 43 0 chr10 16526697 16526932 -123789833 + L1MB3 LINE L1 5928 6172 -11 186 43 0 0 chr10 16526936 16526959 -123789806 + (ATG)n Simple_repeat Simple_repeat 2 24 0 1831 183 0 3 chr10 16527794 16528105 -123788660 + AluJo SINE Alu 1 310 -2 323 161 0 58 chr10 16528287 16528374 -123788391 - L1MA10 LINE L1 0 6334 6253 507 233 0 45 chr10 16529881 16530014 -123786751 + MER63 DNA MER1_type 1 753 -83 267 277 24 0 chr10 16530013 16530096 -123786669 + MER63 DNA MER1_type 976 1060 0 * 273 29 0 0 chr10 16533742 16533776 -123782989 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 301 14 68 chr10 16533951 16534097 -123782668 - L2 LINE L2 -299 2973 2836 2415 49 42 0 chr10 16536831 16537118 -123779647 - AluY SINE Alu -12 299 1 2148 117 0 0 chr10 16538218 16538545 -123778220 + AluSx SINE Alu 1 327 0 528 208 164 25 chr10 16538829 16538988 -123777777 + MER5A DNA MER1_type 9 189 0 703 241 24 18 chr10 16539678 16539848 -123776917 + MER5B DNA MER1_type 2 172 -6 267 301 44 18 chr10 16540183 16540296 -123776469 - LTR16B LTR ERVL -1 463 348 721 297 59 4 chr10 16540338 16540577 -123776188 - LTR16B LTR ERVL -212 252 1 2055 149 0 0 chr10 16540851 16541153 -123775612 - AluSx SINE Alu -10 302 1 392 325 15 35 chr10 16541184 16541384 -123775381 - MIR SINE MIR -18 244 49 312 284 84 32 chr10 16542460 16542650 -123774115 - MIR SINE MIR -2 260 61 2162 111 7 3 chr10 16542739 16543037 -123773728 - AluY SINE Alu -11 300 2 2420 179 26 7 chr10 16543154 16543584 -123773181 + L1PA16 LINE L1 5729 6166 0 3490 88 20 0 chr10 16543823 16544267 -123772498 + MLT2A2 LTR ERVL 1 453 0 847 314 62 0 chr10 16544310 16544616 -123772149 + LTR16C LTR ERVL 167 491 0 234 0 0 0 chr10 16545649 16545675 -123771090 + (CA)n Simple_repeat Simple_repeat 2 27 0 906 188 12 6 chr10 16547052 16547212 -123769553 + FRAM SINE Alu 1 153 -23 2077 126 3 0 chr10 16547216 16547532 -123769233 + AluSx SINE Alu 1 312 0 309 26 0 0 chr10 16547914 16547952 -123768813 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 639 308 100 11 chr10 16548105 16548466 -123768299 + L1ME LINE L1 5282 5682 -439 615 247 132 6 chr10 16548484 16548658 -123768107 - MIR SINE MIR -44 218 23 1950 145 0 0 chr10 16548744 16549060 -123767705 + AluSx SINE Alu 1 316 0 1331 264 116 0 chr10 16549060 16549491 -123767274 - L1ME1 LINE L1 -13 6153 5673 194 263 88 105 chr10 16549612 16549726 -123767039 + MIR SINE MIR 38 149 -59 2007 133 17 91 chr10 16550985 16551103 -123765662 + MLT1B LTR MaLR 1 126 -264 2991 157 91 59 chr10 16551103 16551561 -123765204 + LTR9 LTR ERV1 1 443 -169 212 0 0 35 chr10 16551561 16551590 -123765175 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1867 113 53 0 chr10 16551593 16551859 -123764906 - AluSg SINE Alu -30 280 1 2991 157 91 59 chr10 16551859 16551989 -123764776 + LTR9 LTR ERV1 444 612 0 2007 133 17 91 chr10 16551989 16552276 -123764489 + MLT1B LTR MaLR 126 376 -14 207 336 8 34 chr10 16552354 16552473 -123764292 - L2 LINE L2 -6 3307 3192 4207 109 20 45 chr10 16553091 16553665 -123763100 + MER41B LTR ERV1 1 559 -76 2520 65 3 0 chr10 16553665 16553972 -123762793 - AluY SINE Alu -3 308 1 4207 109 20 45 chr10 16553972 16554048 -123762717 + MER41B LTR ERV1 559 635 0 640 129 35 26 chr10 16554096 16554212 -123762553 + L1MA4A LINE L1 6184 6300 -3 1297 149 104 143 chr10 16554474 16554985 -123761780 + MER4A LTR ERV1 1 344 -121 1992 147 20 3 chr10 16554985 16555291 -123761474 + AluSx SINE Alu 1 311 -1 1297 149 104 143 chr10 16555291 16555389 -123761376 + MER4A LTR ERV1 344 444 -21 188 88 59 0 chr10 16555655 16555689 -123761076 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 328 333 85 41 chr10 16555690 16555936 -123760829 - L2 LINE L2 -2 3270 3014 1708 82 0 0 chr10 16556179 16556411 -123760354 - L1PA7 LINE L1 -686 5486 5255 5702 56 0 0 chr10 16556411 16557069 -123759696 + L1PA7 LINE L1 5496 6154 0 263 139 0 0 chr10 16557087 16557123 -123759642 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 659 200 0 8 chr10 16558003 16558123 -123758642 - MER63 DNA MER1_type -317 745 1 1876 147 48 7 chr10 16558768 16559060 -123757705 - AluSx SINE Alu -8 304 1 232 336 150 11 chr10 16559341 16559615 -123757150 + L2 LINE L2 2904 3215 -98 425 327 9 51 chr10 16559649 16559863 -123756902 - MIR SINE MIR -4 258 54 472 267 38 0 chr10 16559875 16559980 -123756785 + L2 LINE L2 3205 3313 0 821 194 114 27 chr10 16560034 16560297 -123756468 + L1MD3 LINE L1 7695 7980 -15 2388 110 0 0 chr10 16560336 16560645 -123756120 - AluSc SINE Alu 0 309 1 422 314 89 31 chr10 16560729 16560920 -123755845 - MIR3 SINE MIR 0 208 7 351 0 0 0 chr10 16561259 16561298 -123755467 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 16562099 16562129 -123754636 + AT_rich Low_complexity Low_complexity 1 30 0 2079 126 0 0 chr10 16562203 16562489 -123754276 + AluSx SINE Alu 1 286 -26 271 263 120 45 chr10 16562681 16562814 -123753951 - MIR SINE MIR -83 179 37 1431 187 74 11 chr10 16562845 16563129 -123753636 - AluJb SINE Alu -6 306 5 1975 137 0 17 chr10 16564187 16564486 -123752279 + AluJo SINE Alu 3 296 -16 226 331 32 16 chr10 16564726 16564850 -123751915 + MER5A DNA MER1_type 60 185 -4 681 252 6 6 chr10 16565050 16565209 -123751556 - MER5B DNA MER1_type -19 159 1 2537 163 26 9 chr10 16565294 16565747 -123751018 - LTR32 LTR ERVL 0 471 11 1079 129 0 0 chr10 16566404 16566559 -123750206 - AluSg/x SINE Alu -22 288 134 2211 118 0 0 chr10 16567196 16567492 -123749273 + AluSc SINE Alu 9 304 -5 1943 122 7 7 chr10 16568634 16568912 -123747853 - AluSx SINE Alu -24 288 11 1543 200 0 10 chr10 16569621 16569774 -123746991 - AluJo SINE Alu -25 287 137 531 0 0 0 chr10 16569774 16569833 -123746932 + (TA)n Simple_repeat Simple_repeat 1 59 0 1543 200 0 10 chr10 16569833 16569969 -123746796 - AluJo SINE Alu -175 137 1 187 152 0 0 chr10 16570115 16570148 -123746617 - L2 LINE L2 -1 3312 3280 2348 69 23 23 chr10 16570152 16570458 -123746307 + AluY SINE Alu 1 306 -5 2941 3 0 0 chr10 16572790 16573102 -123743663 - AluYb8 SINE Alu -6 312 1 312 313 54 31 chr10 16573275 16573499 -123743266 + HAL1 LINE L1 2265 2493 -14 39 118 0 0 chr10 16573703 16573924 -123742841 + AT_rich Low_complexity Low_complexity 1 221 0 3412 167 49 14 chr10 16574654 16574689 -123742076 + L1MC2 LINE L1 5291 5323 -1021 2036 102 49 3 chr10 16574689 16574974 -123741791 + AluSg SINE Alu 1 298 -12 3412 167 49 14 chr10 16574974 16575592 -123741173 + L1MC2 LINE L1 5323 5967 -377 1524 182 19 36 chr10 16575641 16576029 -123740736 + MSTC LTR MaLR 1 428 0 228 281 90 94 chr10 16578412 16578679 -123738086 + L2 LINE L2 2853 3118 -195 2615 170 50 55 chr10 16578679 16579165 -123737600 - L1MC1 LINE L1 -6 6327 5843 2393 93 0 3 chr10 16579165 16579476 -123737289 - AluSx SINE Alu -2 310 1 2615 170 50 55 chr10 16579476 16579588 -123737177 - L1MC1 LINE L1 -490 5843 5732 375 281 146 49 chr10 16579597 16579782 -123736983 + L2 LINE L2 3111 3313 0 298 312 64 9 chr10 16579978 16580087 -123736678 + L2 LINE L2 3156 3270 -2 438 274 175 34 chr10 16580860 16581123 -123735642 - L3 LINE CR1 -7 1570 1271 1632 175 14 11 chr10 16581144 16581429 -123735336 + AluJb SINE Alu 1 286 -26 230 319 76 80 chr10 16581594 16581696 -123735069 - L3 LINE CR1 -612 965 864 2151 113 3 0 chr10 16581696 16582003 -123734762 - AluSx SINE Alu 0 308 1 230 319 76 80 chr10 16582003 16582187 -123734578 - L3 LINE CR1 -713 864 679 308 250 20 30 chr10 16582189 16582289 -123734476 + L2 LINE L2 3187 3285 -28 358 284 52 39 chr10 16582605 16582760 -123734005 - L3 LINE CR1 -990 587 431 827 114 0 30 chr10 16582851 16582982 -123733783 - FLAM_C SINE Alu -5 138 12 438 358 66 18 chr10 16583399 16583625 -123733140 - MIR SINE MIR -6 256 20 913 293 93 37 chr10 16583762 16584267 -123732498 + L2 LINE L2 2794 3313 0 1514 216 89 39 chr10 16584932 16585371 -123731394 + MLT1C LTR MaLR 5 465 -2 30 27 0 0 chr10 16585371 16585408 -123731357 + AT_rich Low_complexity Low_complexity 1 37 0 960 233 6 0 chr10 16585527 16585703 -123731062 + MER45A DNA AcHobo 2 178 0 1305 163 163 43 chr10 16585848 16586174 -123730591 + MER47A DNA MER2_type 1 365 -1 192 40 0 0 chr10 16586300 16586325 -123730440 + (CA)n Simple_repeat Simple_repeat 1 25 0 1628 144 57 133 chr10 16586383 16586750 -123730015 + Charlie3 DNA MER1_type 1 2712 0 2043 151 0 10 chr10 16587667 16587979 -123728786 - AluJo SINE Alu -3 309 1 242 307 27 0 chr10 16588264 16588339 -123728426 - Charlie4 DNA MER1_type 0 1961 1885 21 36 0 0 chr10 16588633 16588661 -123728104 + AT_rich Low_complexity Low_complexity 1 28 0 1656 162 20 30 chr10 16588916 16589212 -123727553 - AluJb SINE Alu -19 293 1 833 245 38 60 chr10 16589364 16589629 -123727136 - MIR SINE MIR -2 260 2 40203 34 2 0 chr10 16589859 16595381 -123721384 - L1PA4 LINE L1 -3 6152 623 792 33 0 0 chr10 16595381 16595471 -123721294 - L1PA4 LINE L1 -6050 96 7 402 291 89 17 chr10 16595627 16595806 -123720959 - MIR SINE MIR -40 222 31 245 284 21 121 chr10 16595972 16596162 -123720603 + L2 LINE L2 2651 2821 -493 180 0 0 0 chr10 16597220 16597240 -123719525 + (A)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 16598406 16598433 -123718332 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1940 143 0 3 chr10 16598436 16598723 -123718042 - AluSg SINE Alu -24 286 1 390 344 19 19 chr10 16598737 16598894 -123717871 - MIR3 SINE MIR -10 198 42 1966 126 10 40 chr10 16599990 16600292 -123716473 + AluSg SINE Alu 1 293 -17 581 299 69 92 chr10 16600428 16601093 -123715672 + L2 LINE L2 2155 2804 -510 232 333 0 0 chr10 16601106 16601175 -123715590 + L2 LINE L2 2733 2801 -513 22 70 0 0 chr10 16601342 16601385 -123715380 + AT_rich Low_complexity Low_complexity 1 43 0 438 315 127 0 chr10 16601617 16601782 -123714983 - MER91A DNA MER1_type -8 188 3 356 282 57 8 chr10 16601896 16602020 -123714745 + L2 LINE L2 3184 3313 0 2201 123 7 0 chr10 16602069 16602371 -123714394 + AluSq SINE Alu 1 304 -9 2317 130 35 0 chr10 16602398 16602774 -123713991 + L1MA5 LINE L1 5912 6300 0 22 0 0 0 chr10 16603669 16603691 -123713074 + AT_rich Low_complexity Low_complexity 1 22 0 2117 122 3 3 chr10 16604643 16604946 -123711819 + AluSc SINE Alu 1 303 -6 1195 36 0 0 chr10 16605557 16605697 -123711068 - AluY SINE Alu -1 310 171 370 287 63 71 chr10 16607404 16607658 -123709107 + L2 LINE L2 3014 3265 -48 1968 129 17 13 chr10 16607913 16608215 -123708550 + AluJb SINE Alu 1 303 -9 549 110 0 0 chr10 16608603 16608685 -123708080 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 1765 172 0 23 chr10 16609712 16610014 -123706751 - AluJb SINE Alu -17 295 1 3987 165 38 18 chr10 16613451 16613513 -123703252 + L1 LINE L1 3556 3615 -2531 1794 159 6 56 chr10 16613513 16613833 -123702932 + AluJb SINE Alu 1 304 -8 3987 165 38 18 chr10 16613833 16614532 -123702233 + L1 LINE L1 3615 4332 -1814 3615 286 147 13 chr10 16614551 16616210 -123700555 + L1M2a LINE L1 6 1886 -5282 * 4948 147 59 35 chr10 16616205 16617287 -123699478 + L1MA7 LINE L1 5156 6263 -28 1852 157 18 3 chr10 16617287 16617573 -123699192 - AluJo SINE Alu -22 290 1 4948 147 59 35 chr10 16617573 16617603 -123699162 + L1MA7 LINE L1 6263 6291 0 1859 171 4 0 chr10 16618126 16618441 -123698324 + AluSx SINE Alu 1 316 0 257 277 60 12 chr10 16618997 16619080 -123697685 + MIR SINE MIR 68 154 -108 191 79 53 40 chr10 16619418 16619494 -123697271 + (TA)n Simple_repeat Simple_repeat 1 77 0 2108 118 3 22 chr10 16619684 16619998 -123696767 - AluSx SINE Alu -4 308 1 2361 60 0 0 chr10 16620008 16620439 -123696326 - AluY SINE Alu 0 431 1 2057 134 0 0 chr10 16620568 16620851 -123695914 + AluSx SINE Alu 1 283 -29 306 301 55 41 chr10 16620876 16621022 -123695743 - L1ME LINE L1 -518 5646 5499 1076 220 123 82 chr10 16621040 16621229 -123695536 - L1MC5 LINE L1 -38 7923 7743 1828 174 10 3 chr10 16621229 16621527 -123695238 - AluJb SINE Alu -11 301 2 1076 220 123 82 chr10 16621527 16621815 -123694950 - L1MC5 LINE L1 -218 7743 7413 3661 115 11 46 chr10 16621815 16622191 -123694574 + MER1A DNA MER1_type 1 354 -2346 1922 75 4 0 chr10 16622191 16622431 -123694334 + AluSx SINE Alu 60 300 -12 3661 115 11 46 chr10 16622431 16622600 -123694165 + MER1A DNA MER1_type 354 527 0 1076 220 123 82 chr10 16622600 16622722 -123694043 - L1MC5 LINE L1 -548 7413 7298 970 139 20 0 chr10 16623787 16623938 -123692827 - FRAM SINE Alu -23 153 1 496 222 23 6 chr10 16624484 16624660 -123692105 + CT-rich Low_complexity Low_complexity 2 180 0 278 193 18 18 chr10 16624688 16624802 -123691963 + CT-rich Low_complexity Low_complexity 2 115 0 369 0 0 0 chr10 16624802 16624843 -123691922 + (CA)n Simple_repeat Simple_repeat 1 41 0 246 307 54 78 chr10 16625078 16625244 -123691521 + L2 LINE L2 3081 3242 -30 32 35 0 18 chr10 16625462 16625483 -123691282 + AT_rich Low_complexity Low_complexity 1 21 -35 1863 182 0 3 chr10 16625483 16625791 -123690974 + AluJo SINE Alu 1 307 -5 32 35 0 18 chr10 16625791 16625826 -123690939 + AT_rich Low_complexity Low_complexity 21 56 0 2197 91 44 3 chr10 16626113 16626382 -123690383 + AluSg SINE Alu 1 285 -25 279 0 0 0 chr10 16626382 16626413 -123690352 + (CA)n Simple_repeat Simple_repeat 2 32 0 2197 91 44 3 chr10 16626413 16626441 -123690324 + AluSg SINE Alu 285 310 0 1878 127 53 7 chr10 16626555 16626839 -123689926 + AluSx SINE Alu 1 297 -15 238 163 62 0 chr10 16627998 16628078 -123688687 + (TA)n Simple_repeat Simple_repeat 1 85 0 2177 110 3 0 chr10 16628218 16628509 -123688256 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 16628509 16628531 -123688234 + AT_rich Low_complexity Low_complexity 1 22 0 1420 152 16 20 chr10 16628543 16628787 -123687978 + AluJo SINE Alu 45 287 -25 838 161 0 15 chr10 16628892 16629029 -123687736 + AluJo SINE Alu 1 135 -177 1510 189 21 11 chr10 16629029 16629309 -123687456 + AluJo SINE Alu 1 283 -29 226 298 0 0 chr10 16630106 16630163 -123686602 + GA-rich Low_complexity Low_complexity 99 155 0 620 247 96 90 chr10 16630250 16630489 -123686276 - L2 LINE L2 0 3313 3070 225 65 0 0 chr10 16630489 16630520 -123686245 + (TG)n Simple_repeat Simple_repeat 1 31 0 620 247 96 90 chr10 16630520 16630612 -123686153 - L2 LINE L2 -243 3070 2980 517 311 44 19 chr10 16630925 16631131 -123685634 + MIR SINE MIR 52 262 0 929 227 43 11 chr10 16631570 16631852 -123684913 + L1MA4 LINE L1 6009 6299 -1 219 277 64 92 chr10 16631894 16632005 -123684760 + L2 LINE L2 2687 2800 -472 1913 160 3 0 chr10 16632005 16632311 -123684454 + AluJb SINE Alu 1 307 -5 219 277 64 92 chr10 16632311 16632600 -123684165 + L2 LINE L2 2800 3067 -205 26 0 0 0 chr10 16632732 16632758 -123684007 + AT_rich Low_complexity Low_complexity 1 26 0 2141 109 3 0 chr10 16632759 16633042 -123683723 - AluSx SINE Alu -24 288 5 3648 149 20 30 chr10 16633061 16633518 -123683247 - L1PB4 LINE L1 -12 6144 5693 2016 110 62 7 chr10 16633518 16633808 -123682957 - AluSq SINE Alu -7 306 1 3648 149 20 30 chr10 16633808 16633992 -123682773 - L1PB4 LINE L1 -463 5693 5509 376 302 47 31 chr10 16634411 16634603 -123682162 + MIR SINE MIR 40 234 -28 274 217 14 14 chr10 16634622 16634691 -123682074 + (TAG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr10 16635044 16635065 -123681700 + GC_rich Low_complexity Low_complexity 1 21 0 2146 119 10 3 chr10 16635654 16636034 -123680731 - AluSp SINE Alu 0 382 1 2497 74 0 0 chr10 16636045 16636356 -123680409 - AluY SINE Alu 0 311 1 25 65 0 0 chr10 16636808 16636854 -123679911 + AT_rich Low_complexity Low_complexity 1 46 0 1720 145 69 28 chr10 16637241 16637531 -123679234 + AluSx SINE Alu 4 305 -7 1060 180 0 0 chr10 16637547 16637719 -123679046 - FRAM SINE Alu -10 166 1 922 260 66 17 chr10 16637732 16638020 -123678745 + MLT1J LTR MaLR 210 511 0 3348 143 10 56 chr10 16638682 16639310 -123677455 - LTR9 LTR ERV1 0 612 14 222 62 0 0 chr10 16639311 16639343 -123677422 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2127 69 0 79 chr10 16639343 16639646 -123677119 - AluY SINE Alu -32 279 1 443 251 169 6 chr10 16639673 16639856 -123676909 - MIR SINE MIR -48 214 2 798 211 13 6 chr10 16640284 16640440 -123676325 + FRAM SINE Alu 2 158 -18 1868 152 0 26 chr10 16640459 16640762 -123676003 + AluJo SINE Alu 1 295 -17 382 246 94 22 chr10 16640819 16640957 -123675808 - MARNA DNA Mariner -236 350 203 468 281 146 35 chr10 16642601 16642861 -123673904 + MLT1L LTR MaLR 3 291 -324 1229 170 0 28 chr10 16642872 16643084 -123673681 + AluJo SINE Alu 86 291 -21 783 208 0 0 chr10 16644817 16644947 -123671818 - FLAM_A SINE Alu 0 133 4 4805 152 66 24 chr10 16645276 16646143 -123670622 + MER4D LTR ERV1 1 903 0 2401 86 13 0 chr10 16646753 16647057 -123669708 - AluSc SINE Alu -1 308 1 261 232 0 37 chr10 16647473 16647555 -123669210 + GA-rich Low_complexity Low_complexity 1 79 0 2074 247 46 26 chr10 16647557 16648127 -123668638 + MLT1G LTR MaLR 1 581 -9 24 53 0 0 chr10 16648346 16648384 -123668381 + AT_rich Low_complexity Low_complexity 1 38 0 276 308 0 0 chr10 16648619 16648684 -123668081 - L2 LINE L2 -20 3252 3188 1050 235 18 43 chr10 16648939 16649216 -123667549 + MLT1A2 LTR MaLR 6 275 -99 200 306 63 54 chr10 16649221 16649332 -123667433 + L2 LINE L2 3156 3267 -5 24 53 0 0 chr10 16649415 16649453 -123667312 + AT_rich Low_complexity Low_complexity 1 38 0 464 233 25 74 chr10 16649460 16649623 -123667142 - HAL1 LINE L1 -1 2506 2352 501 322 153 8 chr10 16650303 16650558 -123666207 + L3 LINE CR1 208 499 -1078 1995 128 0 3 chr10 16650677 16650992 -123665773 + AluSx SINE Alu 1 314 0 210 380 20 10 chr10 16651046 16651146 -123665619 + L3 LINE CR1 1440 1540 -37 1716 150 73 4 chr10 16651172 16651446 -123665319 - AluJo SINE Alu -19 293 1 23 0 0 0 chr10 16653058 16653081 -123663684 + AT_rich Low_complexity Low_complexity 1 23 0 1932 257 19 38 chr10 16653255 16653974 -123662791 - L1M4 LINE L1 -4831 1711 1067 2093 127 0 7 chr10 16654223 16654554 -123662211 + AluSx SINE Alu 1 312 0 1176 268 90 29 chr10 16655177 16655304 -123661461 + L2 LINE L2 2807 2925 -388 2456 189 15 109 chr10 16655304 16655850 -123660915 + MLT2B3 LTR ERVL 1 484 -70 1777 174 26 7 chr10 16655850 16656177 -123660588 + AluJb SINE Alu 1 312 0 2456 189 15 109 chr10 16656177 16656242 -123660523 + MLT2B3 LTR ERVL 484 554 0 1176 268 90 29 chr10 16656242 16656592 -123660173 + L2 LINE L2 2925 3313 0 1837 148 52 86 chr10 16657264 16657648 -123659117 - THE1C LTR MaLR -4 371 1 23 0 0 0 chr10 16658232 16658255 -123658510 + AT_rich Low_complexity Low_complexity 1 23 0 956 172 0 24 chr10 16658298 16658467 -123658298 + FRAM SINE Alu 1 159 -17 2161 94 0 4 chr10 16660156 16660454 -123656311 - AluSc SINE Alu 0 305 9 2046 109 0 0 chr10 16661755 16662030 -123654735 - AluSx SINE Alu -3 309 35 618 328 69 40 chr10 16664112 16664563 -123652202 - LTR16B LTR ERVL 0 464 1 251 321 36 12 chr10 16664607 16664691 -123652074 - MIR3 SINE MIR -25 183 98 248 245 112 49 chr10 16664841 16664984 -123651781 - L1ME4a LINE L1 -5 6116 5965 227 217 33 0 chr10 16665032 16665092 -123651673 - L1M3 LINE L1 -294 5889 5828 182 282 77 39 chr10 16665557 16665635 -123651130 + MIR SINE MIR 13 93 -169 2401 77 7 0 chr10 16665687 16665997 -123650768 + L1MA3 LINE L1 5638 5949 -356 22 70 0 0 chr10 16666000 16666043 -123650722 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 16666191 16666220 -123650545 + AT_rich Low_complexity Low_complexity 1 29 0 2398 90 10 3 chr10 16667145 16667455 -123649310 + AluSq SINE Alu 1 312 -1 354 45 0 0 chr10 16667977 16668021 -123648744 + (TG)n Simple_repeat Simple_repeat 1 44 0 254 236 32 122 chr10 16669884 16670007 -123646758 - L2 LINE L2 -5 3308 3197 261 308 77 26 chr10 16670156 16670273 -123646492 + L2 LINE L2 3145 3267 -5 2531 52 0 10 chr10 16670679 16670985 -123645780 - AluY SINE Alu -8 303 1 346 43 0 0 chr10 16671037 16671083 -123645682 - MADE1 DNA Mariner -34 46 1 261 242 121 25 chr10 16671691 16671848 -123644917 + L1MC4 LINE L1 7698 7869 -173 1443 160 4 4 chr10 16671910 16672135 -123644630 + AluJo SINE Alu 1 225 -87 227 316 32 11 chr10 16672389 16672484 -123644281 - L3b LINE CR1 -132 1451 1355 2157 97 0 57 chr10 16672725 16673056 -123643709 - AluSx SINE Alu 0 312 1 237 188 31 62 chr10 16673093 16673157 -123643608 + L2 LINE L2 3168 3229 -84 293 100 20 0 chr10 16673766 16673816 -123642949 + (CA)n Simple_repeat Simple_repeat 2 52 0 2439 88 0 0 chr10 16674869 16675177 -123641588 - AluY SINE Alu -3 308 1 1926 147 0 38 chr10 16675649 16675969 -123640796 - AluSq SINE Alu -5 308 1 413 296 33 0 chr10 16676109 16676261 -123640504 + MER103 DNA DNA 2 158 -8 2059 117 47 7 chr10 16677342 16677642 -123639123 + AluSx SINE Alu 1 312 0 2151 130 3 0 chr10 16677957 16678265 -123638500 - AluSg SINE Alu -1 309 1 287 288 58 50 chr10 16678447 16678586 -123638179 + MIR SINE MIR 24 163 -99 2295 87 17 0 chr10 16678604 16678904 -123637861 - AluSx SINE Alu -7 305 1 844 259 93 19 chr10 16679205 16679529 -123637236 - L1MC/D LINE L1 -2147 5661 5314 420 20 0 0 chr10 16679791 16679840 -123636925 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1313 201 0 35 chr10 16679851 16680110 -123636655 - AluJo SINE Alu -25 287 38 231 306 57 16 chr10 16680123 16680247 -123636518 - L1MC/D LINE L1 -1131 5015 4887 1333 105 6 0 chr10 16680341 16680522 -123636243 - AluSg/x SINE Alu 0 310 129 252 175 63 28 chr10 16680649 16680792 -123635973 + (TA)n Simple_repeat Simple_repeat 2 149 0 195 42 0 0 chr10 16680856 16680880 -123635885 + (TA)n Simple_repeat Simple_repeat 2 25 0 254 253 0 40 chr10 16682183 16682258 -123634507 + LTR33A LTR ERVL 450 521 -2 969 164 84 148 chr10 16682895 16683193 -123633572 + AluJb SINE Alu 8 286 -26 189 0 0 0 chr10 16683224 16683245 -123633520 + (CA)n Simple_repeat Simple_repeat 2 22 0 1253 231 55 22 chr10 16683706 16684018 -123632747 - MER58B DNA MER1_type -14 327 6 7162 72 15 12 chr10 16684091 16685165 -123631600 - L1PB1 LINE L1 -1 6150 5078 2042 147 7 0 chr10 16685181 16685488 -123631277 + AluSx SINE Alu 1 309 -3 230 222 11 0 chr10 16685568 16685658 -123631107 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 806 258 99 54 chr10 16685660 16686214 -123630551 - L1ME2 LINE L1 -323 5841 5263 405 276 109 21 chr10 16686468 16686660 -123630105 + L2 LINE L2 2806 3014 -299 1114 207 0 0 chr10 16686719 16686946 -123629819 + L1P LINE L1 5116 5342 -804 184 229 153 59 chr10 16686947 16687065 -123629700 + L2 LINE L2 3021 3149 -164 215 278 188 30 chr10 16687119 16687252 -123629513 + L2 LINE L2 3158 3311 -2 2312 104 0 0 chr10 16688471 16688768 -123627997 - AluSq SINE Alu -16 297 1 219 240 0 0 chr10 16689924 16689974 -123626791 + (CA)n Simple_repeat Simple_repeat 2 51 0 643 324 44 7 chr10 16690209 16690484 -123626281 + L2 LINE L2 2411 2695 -619 273 278 97 0 chr10 16690506 16690578 -123626187 - AluJo SINE Alu -143 159 81 1824 307 153 40 chr10 16691387 16692650 -123624115 + L2 LINE L2 1255 2739 -574 1483 184 26 8 chr10 16692650 16692917 -123623848 - AluJo SINE Alu -40 272 1 1824 307 153 40 chr10 16692917 16693279 -123623486 + L2 LINE L2 2739 3059 -254 1682 206 51 74 chr10 16693279 16693718 -123623047 + MLT1D LTR MaLR 1 428 -77 2220 131 0 0 chr10 16693718 16694030 -123622735 + AluSx SINE Alu 1 312 0 1682 206 51 74 chr10 16694030 16694104 -123622661 + MLT1D LTR MaLR 428 502 -3 339 44 0 0 chr10 16694130 16694175 -123622590 + (CA)n Simple_repeat Simple_repeat 1 45 0 435 315 69 23 chr10 16694919 16695179 -123621586 + MLT1I LTR MaLR 111 382 -27 265 304 34 34 chr10 16696402 16696550 -123620215 - L1ME4a LINE L1 -213 5908 5761 567 235 36 73 chr10 16697678 16697905 -123618860 - L1ME1 LINE L1 -19 6147 5967 23 0 0 0 chr10 16698355 16698378 -123618387 + AT_rich Low_complexity Low_complexity 1 23 0 2060 136 0 57 chr10 16698477 16698808 -123617957 + AluSx SINE Alu 1 312 0 294 87 0 0 chr10 16700033 16700079 -123616686 + (TTTTTA)n Simple_repeat Simple_repeat 2 47 0 321 296 184 15 chr10 16701624 16701838 -123614927 + MIR3 SINE MIR 1 250 -12 2206 100 31 0 chr10 16702848 16703139 -123613626 - AluSq SINE Alu -13 300 1 264 170 0 0 chr10 16706632 16706685 -123610080 + (TG)n Simple_repeat Simple_repeat 1 53 0 1281 163 23 19 chr10 16706718 16706982 -123609783 - AluJo SINE Alu 0 312 48 192 77 0 0 chr10 16707025 16707051 -123609714 + (TTC)n Simple_repeat Simple_repeat 2 27 0 819 148 7 22 chr10 16707053 16707188 -123609577 - FLAM_C SINE Alu 0 133 1 1781 99 3 114 chr10 16708020 16708344 -123608421 + AluSg SINE Alu 1 288 -22 2067 142 0 3 chr10 16709232 16709534 -123607231 + AluSx SINE Alu 1 301 -11 201 300 29 0 chr10 16709661 16709731 -123607034 - MIR SINE MIR -123 139 68 26 0 0 0 chr10 16712201 16712227 -123604538 + AT_rich Low_complexity Low_complexity 1 26 0 594 174 7 13 chr10 16712325 16712480 -123604285 + GA-rich Low_complexity Low_complexity 4 157 0 470 245 61 94 chr10 16712643 16712888 -123603877 - L2 LINE L2 -1 3312 3076 2442 97 44 36 chr10 16713116 16713477 -123603288 + THE1B LTR MaLR 1 364 0 514 294 28 0 chr10 16714319 16714462 -123602303 + MIR SINE MIR 2 148 -114 1683 183 34 29 chr10 16714482 16714832 -123601933 + MER46B DNA MER2_type 10 236 0 1692 160 63 45 chr10 16715132 16715464 -123601301 + MER44D DNA MER2_type 2 609 0 1497 272 51 23 chr10 16715763 16716024 -123600741 - L1ME3A LINE L1 -15 6155 5903 2114 121 0 29 chr10 16716024 16716339 -123600426 - AluSg1 SINE Alu -3 306 1 1497 272 51 23 chr10 16716339 16716352 -123600413 - L1ME3A LINE L1 -267 5903 5567 470 283 39 63 chr10 16716352 16716638 -123600127 - L1MA6 LINE L1 -431 5869 5591 * 1276 290 132 28 chr10 16716616 16717386 -123599379 - L1MEd LINE L1 -3879 2250 1561 207 0 0 0 chr10 16717386 16717409 -123599356 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1276 290 132 28 chr10 16717409 16717937 -123598828 - L1MEd LINE L1 -4568 1561 817 1216 203 17 17 chr10 16718764 16719000 -123597765 - MER46A DNA MER2_type 0 236 1 195 407 0 0 chr10 16719234 16719320 -123597445 - MIR SINE MIR -114 148 63 1766 167 0 35 chr10 16719442 16719754 -123597011 + AluJo SINE Alu 1 301 -11 4718 188 61 39 chr10 16719763 16720853 -123595912 + L1MC3 LINE L1 6663 7775 -10 2020 96 4 0 chr10 16720897 16721157 -123595608 - AluSp SINE Alu -14 299 39 198 0 0 0 chr10 16721235 16721257 -123595508 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1885 188 0 0 chr10 16721280 16721584 -123595181 - AluJo SINE Alu -8 304 1 210 118 0 0 chr10 16721990 16722024 -123594741 + (A)n Simple_repeat Simple_repeat 1 34 0 361 321 44 15 chr10 16722263 16722400 -123594365 - L2 LINE L2 0 3313 3173 1879 111 8 0 chr10 16722473 16722734 -123594031 - AluY SINE Alu -23 288 26 339 250 148 0 chr10 16722770 16722858 -123593907 - MIR SINE MIR -91 171 71 1031 181 30 55 chr10 16722860 16723097 -123593668 + AluJo SINE Alu 55 285 -27 2072 132 7 0 chr10 16723113 16723417 -123593348 + AluSx SINE Alu 1 306 -6 269 318 45 23 chr10 16723754 16723886 -123592879 + MLT1K LTR MaLR 111 245 -343 272 230 11 71 chr10 16724090 16724205 -123592560 + MLT1K LTR MaLR 484 611 -4 205 75 50 25 chr10 16724365 16724405 -123592360 + A-rich Low_complexity Low_complexity 2 42 0 966 93 0 93 chr10 16725114 16725264 -123591501 + AluSq SINE Alu 35 170 -143 457 101 29 0 chr10 16725264 16725333 -123591432 + Alu SINE Alu 228 298 -11 2084 114 28 0 chr10 16726266 16726555 -123590210 - AluSx SINE Alu -15 297 1 2043 138 0 0 chr10 16727062 16727387 -123589378 - AluSx SINE Alu 0 325 1 307 252 138 49 chr10 16727840 16727963 -123588802 - L2 LINE L2 -7 3265 3132 3316 93 81 10 chr10 16728294 16728786 -123587979 - L1PA13 LINE L1 -6 6157 5631 268 267 100 11 chr10 16728835 16728925 -123587840 - L2 LINE L2 -2 3270 3173 2523 155 34 12 chr10 16730040 16730453 -123586312 - MSTB LTR MaLR 0 426 5 22 0 0 0 chr10 16731272 16731294 -123585471 + AT_rich Low_complexity Low_complexity 1 22 0 258 354 77 8 chr10 16731689 16731819 -123584946 - MER5B DNA MER1_type -10 168 30 42929 33 24 1 chr10 16782488 16787856 -123528909 - L1P1 LINE L1 -654 5501 8 1103 248 123 45 chr10 16787869 16788494 -123528271 - L1M4 LINE L1 -1905 4241 3568 10655 207 57 20 chr10 16788504 16792350 -123524415 - L1 LINE L1 -816 5566 1488 2040 127 0 0 chr10 16792350 16792634 -123524131 - AluSx SINE Alu -26 286 3 10655 207 57 20 chr10 16792634 16793890 -123522875 - L1 LINE L1 -4894 1488 280 360 261 35 26 chr10 16793896 16794011 -123522754 - MIR SINE MIR -26 236 121 23 0 0 0 chr10 16794456 16794479 -123522286 + AT_rich Low_complexity Low_complexity 1 23 0 313 369 16 0 chr10 16794710 16794832 -123521933 + L2 LINE L2 3187 3310 -3 22 35 0 0 chr10 16795390 16795419 -123521346 + AT_rich Low_complexity Low_complexity 1 29 0 316 325 79 9 chr10 16795880 16795994 -123520771 - L2 LINE L2 -8 3305 3184 354 80 0 0 chr10 16796002 16796052 -123520713 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 407 286 66 52 chr10 16796295 16797110 -123519655 - L1MC5 LINE L1 -285 7676 7000 349 229 28 56 chr10 16797161 16797305 -123519460 - L1MC4 LINE L1 -975 7067 6928 790 279 9 23 chr10 16797468 16797687 -123519078 + MER58A DNA MER1_type 4 219 -5 2105 62 0 4 chr10 16797858 16798116 -123518649 + AluY SINE Alu 35 291 -20 5317 110 20 8 chr10 16798120 16798912 -123517853 - L1PA13 LINE L1 -21 6142 5341 1557 187 28 21 chr10 16799612 16799910 -123516855 - L1M3 LINE L1 -402 5766 5477 380 141 42 0 chr10 16799910 16799971 -123516794 + L1MB1 LINE L1 6094 6167 -1 1557 187 28 21 chr10 16799971 16800020 -123516745 - L1M3 LINE L1 -691 5477 5430 28 0 0 0 chr10 16801268 16801296 -123515469 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 16801327 16801354 -123515411 + (T)n Simple_repeat Simple_repeat 1 27 0 362 239 9 0 chr10 16801469 16801582 -123515183 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 969 176 0 6 chr10 16802033 16802192 -123514573 - FAM SINE Alu -17 158 1 232 244 94 55 chr10 16802271 16802472 -123514293 - L1M3 LINE L1 -743 5403 5195 2787 186 32 32 chr10 16802738 16803330 -123513435 - L1MC3 LINE L1 -3 7782 7191 1955 152 0 3 chr10 16803337 16803639 -123513126 - AluSx SINE Alu -11 301 1 279 264 11 23 chr10 16803655 16803742 -123513023 - MLT1F1 LTR MaLR -442 125 40 284 47 70 0 chr10 16803742 16803785 -123512980 - L1MC3 LINE L1 -684 7101 7056 303 339 45 49 chr10 16804051 16804296 -123512469 - L1M3 LINE L1 -2135 4011 3768 233 264 27 9 chr10 16804299 16804395 -123512370 + (TA)n Simple_repeat Simple_repeat 2 102 -11 1986 165 12 6 chr10 16804395 16804741 -123512024 - MER7A DNA MER2_type 0 346 1 233 264 27 9 chr10 16804741 16804754 -123512011 + (TA)n Simple_repeat Simple_repeat 102 113 0 2565 103 0 14 chr10 16805527 16805894 -123510871 - THE1B LTR MaLR -2 362 1 204 225 0 0 chr10 16807271 16807311 -123509454 + CT-rich Low_complexity Low_complexity 2 41 0 462 273 0 0 chr10 16807313 16807587 -123509178 + (TA)n Simple_repeat Simple_repeat 1 274 0 1799 163 3 10 chr10 16807797 16808092 -123508673 + AluJo SINE Alu 1 293 -19 304 250 25 0 chr10 16808125 16808205 -123508560 + MER103 DNA DNA 21 102 -64 1297 172 39 7 chr10 16808959 16809244 -123507521 + L1MA4 LINE L1 6000 6293 -7 728 228 12 12 chr10 16810023 16810190 -123506575 - MLT1E LTR MaLR -2 591 425 3670 202 34 18 chr10 16810520 16811367 -123505398 - L1MB8 LINE L1 -1 6177 5317 1818 199 21 3 chr10 16811519 16811891 -123504874 - L1MB8 LINE L1 -944 5202 4824 2227 113 0 0 chr10 16812511 16812811 -123503954 + AluSx SINE Alu 1 300 -12 5023 140 11 6 chr10 16813246 16814060 -123502705 - L1PA13 LINE L1 0 6163 5346 1292 27 0 0 chr10 16814277 16814423 -123502342 + AluYa5 SINE Alu 1 146 -165 2350 102 0 0 chr10 16815204 16815509 -123501256 - AluSx SINE Alu -5 307 3 268 299 188 8 chr10 16816900 16817017 -123499748 - MIR SINE MIR -115 147 10 193 264 19 19 chr10 16817063 16817116 -123499649 + L3b LINE CR1 1250 1302 -281 26 64 0 0 chr10 16817526 16817573 -123499192 + AT_rich Low_complexity Low_complexity 1 47 0 321 367 26 30 chr10 16819751 16820021 -123496744 + L2 LINE L2 2697 2965 -349 752 220 120 10 chr10 16822647 16822847 -123493918 - MIR SINE MIR -10 252 31 23 0 0 0 chr10 16823574 16823597 -123493168 + AT_rich Low_complexity Low_complexity 1 23 0 247 327 10 58 chr10 16826051 16826155 -123490610 + L2 LINE L2 3137 3235 -37 180 0 0 0 chr10 16826685 16826705 -123490060 + (A)n Simple_repeat Simple_repeat 1 20 0 298 277 107 9 chr10 16827646 16827758 -123489007 + MER5A DNA MER1_type 7 129 -60 315 284 28 26 chr10 16827800 16827979 -123488786 + MIR SINE MIR 3 244 -18 228 222 32 0 chr10 16828138 16828201 -123488564 - L1ME4a LINE L1 -91 6030 5966 361 327 100 19 chr10 16828277 16828537 -123488228 - L1ME4a LINE L1 -289 5832 5552 227 358 34 7 chr10 16828540 16828688 -123488077 - L1ME4a LINE L1 -630 5536 5385 1684 157 7 30 chr10 16829282 16829587 -123487178 - AluJo SINE Alu -14 298 1 2349 100 3 0 chr10 16829594 16829903 -123486862 - AluSq SINE Alu -3 310 1 2310 91 0 0 chr10 16830506 16830803 -123485962 - AluY SINE Alu -14 297 1 2467 77 0 0 chr10 16832133 16832443 -123484322 + AluY SINE Alu 1 310 -1 272 299 39 3 chr10 16832553 16832655 -123484110 + MIR SINE MIR 40 144 -64 235 231 46 15 chr10 16832785 16832850 -123483915 - L2 LINE L2 -87 3185 3119 189 107 0 0 chr10 16833227 16833255 -123483510 + (T)n Simple_repeat Simple_repeat 1 28 0 529 303 151 60 chr10 16833498 16833739 -123483026 + L2 LINE L2 1602 1820 -1493 5549 135 68 30 chr10 16833739 16834771 -123481994 + MER11C LTR ERVK 1 1071 0 529 303 151 60 chr10 16834771 16835897 -123480868 + L2 LINE L2 1820 3096 -217 1584 179 67 24 chr10 16836551 16836880 -123479885 - MER2 DNA MER2_type 0 344 2 4876 213 48 30 chr10 16837043 16838241 -123478524 + Charlie1a DNA MER1_type 2 1220 -235 334 212 0 0 chr10 16838253 16838319 -123478446 + Charlie1a DNA MER1_type 1390 1455 0 188 247 0 135 chr10 16839549 16839638 -123477127 + MIR SINE MIR 116 192 -70 27 0 0 0 chr10 16840034 16840061 -123476704 + AT_rich Low_complexity Low_complexity 1 27 0 1344 315 37 8 chr10 16840624 16841133 -123475632 + L2 LINE L2 2545 3069 -244 250 294 78 39 chr10 16842254 16842407 -123474358 - MIR SINE MIR 0 262 104 439 173 0 0 chr10 16842626 16842701 -123474064 + AluY SINE Alu 126 200 -111 325 344 80 0 chr10 16843011 16843136 -123473629 + MIR3 SINE MIR 32 166 -42 335 319 162 22 chr10 16845343 16845572 -123471193 + MIR SINE MIR 2 262 0 226 185 0 62 chr10 16845774 16845862 -123470903 + T-rich Low_complexity Low_complexity 3 137 0 2338 84 7 0 chr10 16846711 16847007 -123469758 - AluSq SINE Alu -15 298 1 226 122 24 0 chr10 16848041 16848082 -123468683 + MER103 DNA DNA 26 67 -99 416 300 41 59 chr10 16848219 16848389 -123468376 + MIR3 SINE MIR 36 202 -6 418 236 28 9 chr10 16848619 16848725 -123468040 + L2 LINE L2 2309 2416 -898 1661 212 28 33 chr10 16849143 16849535 -123467230 + MLT1B LTR MaLR 1 390 0 5114 129 21 10 chr10 16849563 16850399 -123466366 - Tigger1 DNA MER2_type 0 2418 1573 813 278 74 5 chr10 16850398 16850682 -123466083 + MLT1F LTR MaLR 8 351 -244 * 303 301 91 21 chr10 16851152 16851295 -123465470 + L1 LINE L1 4015 4167 -1979 1478 156 51 32 chr10 16851519 16851834 -123464931 - MER44D DNA MER2_type -15 594 4 688 273 126 56 chr10 16852360 16852947 -123463818 - L1MC5 LINE L1 -26 7935 7308 247 306 99 9 chr10 16852972 16853083 -123463682 - L1MC4 LINE L1 -568 7474 7354 256 221 0 0 chr10 16853159 16853228 -123463537 - L1MC4 LINE L1 -733 7228 7161 394 275 88 36 chr10 16853240 16853658 -123463107 - L1MEc LINE L1 -3056 3073 2634 1064 179 0 0 chr10 16854170 16854349 -123462416 - AluJb SINE Alu -5 307 129 305 280 0 0 chr10 16854449 16854524 -123462241 + MIR SINE MIR 73 147 -115 296 212 159 9 chr10 16854616 16854729 -123462036 - MIR SINE MIR -5 257 128 264 258 104 18 chr10 16854771 16854934 -123461831 + L1MEd LINE L1 8 184 -5935 21 0 0 0 chr10 16855142 16855163 -123461602 + AT_rich Low_complexity Low_complexity 1 21 0 354 357 25 10 chr10 16855187 16855383 -123461382 - L1MEc LINE L1 -4808 1502 1304 564 238 75 37 chr10 16855386 16855735 -123461030 - L1MEc LINE L1 -4862 1257 896 238 24 0 49 chr10 16855846 16855887 -123460878 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 414 343 19 56 chr10 16855918 16856239 -123460526 - L1MEc LINE L1 -5479 640 332 34951 92 9 15 chr10 16856506 16862679 -123454086 - L1PA6 LINE L1 -8 6146 11 195 42 0 0 chr10 16862694 16862718 -123454047 + (T)n Simple_repeat Simple_repeat 1 24 0 908 196 12 6 chr10 16864676 16864849 -123451916 - FAM SINE Alu -1 174 1 280 207 18 0 chr10 16864854 16864965 -123451800 + (TA)n Simple_repeat Simple_repeat 2 114 0 2293 85 0 0 chr10 16864965 16865248 -123451517 - AluSc SINE Alu -26 283 1 1268 227 43 32 chr10 16866038 16866413 -123450352 - MLT1B LTR MaLR -11 379 1 633 233 125 22 chr10 16866413 16866645 -123450120 - L1MC4 LINE L1 -466 7576 7321 667 357 38 20 chr10 16866683 16867131 -123449634 + HERV16 LTR ERVL 1070 1525 -3471 691 341 74 22 chr10 16867166 16867439 -123449326 - LTR16A LTR ERVL 0 450 148 1709 215 83 32 chr10 16867439 16867931 -123448834 - MLT2B1 LTR ERVL -1 519 3 691 341 74 22 chr10 16867931 16868062 -123448703 - LTR16A LTR ERVL -302 148 25 653 299 40 18 chr10 16868215 16868493 -123448272 - HERV16 LTR ERVL -4108 888 605 2067 142 0 3 chr10 16868625 16868928 -123447837 - AluSx SINE Alu -10 302 1 598 309 100 19 chr10 16868928 16869297 -123447468 - HERV16 LTR ERVL -4445 551 153 871 313 38 3 chr10 16869440 16869808 -123446957 - LTR16A LTR ERVL -63 387 7 2249 105 0 3 chr10 16869874 16870169 -123446596 + AluSc SINE Alu 1 294 -15 537 194 0 37 chr10 16870218 16870326 -123446439 + U13 snRNA snRNA 1 104 0 1972 155 0 3 chr10 16870341 16870644 -123446121 + AluJo SINE Alu 1 302 -10 311 333 38 25 chr10 16870648 16870807 -123445958 + HERV16 LTR ERVL 1727 1887 -3109 291 243 0 0 chr10 16870948 16871018 -123445747 + HERV16 LTR ERVL 2015 2084 -2912 729 253 76 28 chr10 16871023 16871222 -123445543 - L1MEc LINE L1 -4132 2264 2076 198 0 0 0 chr10 16871222 16871244 -123445521 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2164 107 0 0 chr10 16871244 16871524 -123445241 - AluSx SINE Alu -32 280 1 729 253 76 28 chr10 16871524 16871679 -123445086 - L1MEc LINE L1 -4319 2077 1892 1960 108 57 0 chr10 16871911 16872121 -123444644 - AluSp SINE Alu 0 346 113 186 71 0 0 chr10 16872121 16872149 -123444616 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1960 108 57 0 chr10 16872149 16872250 -123444515 - AluSp SINE Alu -233 113 19 2147 178 31 7 chr10 16872372 16872794 -123443971 + MSTB1 LTR MaLR 1 432 0 378 324 83 23 chr10 16872830 16873046 -123443719 + L1ME LINE L1 2676 2904 -3242 2900 13 0 0 chr10 16873530 16873847 -123442918 + AluYb8 SINE Alu 1 317 -1 636 133 0 25 chr10 16873939 16874059 -123442706 + LTR9B LTR ERV1 445 561 -83 548 305 65 10 chr10 16874491 16874875 -123441890 + L1ME LINE L1 3787 4191 -1955 30 45 0 0 chr10 16875144 16875188 -123441577 + AT_rich Low_complexity Low_complexity 1 44 0 1953 115 0 4 chr10 16875331 16875600 -123441165 + AluSg SINE Alu 39 306 -4 377 231 68 41 chr10 16875755 16875902 -123440863 + L1ME LINE L1 5546 5696 -425 255 209 86 79 chr10 16875932 16876071 -123440694 + L1ME LINE L1 5759 5898 -223 327 25 0 0 chr10 16876074 16876114 -123440651 + (TG)n Simple_repeat Simple_repeat 1 40 0 183 284 54 14 chr10 16876763 16876837 -123439928 + L2 LINE L2 2720 2796 -518 210 148 52 44 chr10 16877705 16877840 -123438925 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 * 373 154 19 49 chr10 16877807 16877969 -123438796 + (TA)n Simple_repeat Simple_repeat 1 157 0 233 127 42 42 chr10 16878025 16878096 -123438669 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 2275 101 33 56 chr10 16878280 16878522 -123438243 + L1PA16 LINE L1 5780 6011 -155 2272 126 0 0 chr10 16878522 16878832 -123437933 + AluSx SINE Alu 1 310 -2 2275 101 33 56 chr10 16878832 16878984 -123437781 + L1PA16 LINE L1 6011 6165 -1 1445 200 128 17 chr10 16880415 16880820 -123435945 - MER66A LTR ERV1 0 478 29 202 365 12 12 chr10 16880951 16881036 -123435729 + L2 LINE L2 3187 3271 -1 254 327 20 10 chr10 16882220 16882321 -123434444 + L2 LINE L2 2717 2818 -496 193 264 220 0 chr10 16882454 16882545 -123434220 + L2 LINE L2 3162 3272 0 2409 107 0 0 chr10 16882557 16882867 -123433898 - AluSp SINE Alu -3 310 1 1318 214 118 65 chr10 16882924 16883527 -123433238 + MLT1E2 LTR MaLR 1 626 0 185 0 0 39 chr10 16883554 16883580 -123433185 + (TG)n Simple_repeat Simple_repeat 2 26 0 5385 84 18 5 chr10 16884346 16885130 -123431635 + L1PA11 LINE L1 5379 6172 -2 185 287 120 37 chr10 16886136 16886244 -123430521 - MER5A DNA MER1_type -25 164 48 1444 6 0 0 chr10 16886761 16886920 -123429845 - AluYb8 SINE Alu -13 305 147 2219 106 0 0 chr10 16887241 16887525 -123429240 - AluSx SINE Alu -28 284 1 261 180 0 0 chr10 16887620 16887670 -123429095 - MER53 DNA DNA -3 186 137 646 149 18 0 chr10 16887674 16887788 -123428977 - AluY SINE Alu -1 310 195 386 219 81 0 chr10 16887789 16887912 -123428853 - MER53 DNA DNA -55 134 2 198 294 103 15 chr10 16887938 16888006 -123428759 + L2 LINE L2 3181 3254 -18 212 308 0 0 chr10 16888804 16888856 -123427909 + (CA)n Simple_repeat Simple_repeat 2 53 0 299 254 129 8 chr10 16888899 16889059 -123427706 + L1ME LINE L1 5401 5598 -523 186 43 0 0 chr10 16889059 16889082 -123427683 + (TA)n Simple_repeat Simple_repeat 2 24 0 299 254 129 8 chr10 16889082 16889119 -123427646 + L1ME LINE L1 5598 5629 -492 25 0 0 0 chr10 16889587 16889612 -123427153 + AT_rich Low_complexity Low_complexity 1 25 0 2086 100 0 56 chr10 16890138 16890459 -123426306 - AluSg SINE Alu -7 303 1 370 356 148 5 chr10 16891463 16891665 -123425100 + L2 LINE L2 3022 3252 -20 234 0 0 0 chr10 16892476 16892502 -123424263 + (T)n Simple_repeat Simple_repeat 1 26 0 1417 208 17 10 chr10 16893371 16893664 -123423101 - AluJo SINE Alu -7 295 1 575 321 36 40 chr10 16894063 16894158 -123422607 + MIR SINE MIR 15 109 -153 2414 87 3 0 chr10 16894158 16894457 -123422308 - AluSx SINE Alu -12 300 1 575 321 36 40 chr10 16894457 16894610 -123422155 + MIR SINE MIR 109 262 0 444 328 8 0 chr10 16894753 16894875 -123421890 - L2 LINE L2 -4 3268 3146 446 345 44 29 chr10 16895428 16895703 -123421062 - L1MEd LINE L1 -5290 829 551 955 230 28 92 chr10 16896366 16896729 -123420036 + MLT1A1 LTR MaLR 1 442 -25 2240 217 110 34 chr10 16896785 16897540 -123419225 - L1ME2 LINE L1 -178 5986 5108 2141 101 33 16 chr10 16897540 16897846 -123418919 - AluY SINE Alu 0 311 1 2240 217 110 34 chr10 16897846 16898200 -123418565 - L1ME2 LINE L1 -1056 5108 4782 2036 188 166 2 chr10 16898269 16898716 -123418049 - MLT2B1 LTR ERVL 0 520 1 581 204 39 163 chr10 16898716 16898774 -123417991 - L1ME2 LINE L1 -1420 4726 4662 2194 131 46 8 chr10 16898774 16899125 -123417640 + THE1B LTR MaLR 1 364 0 581 204 39 163 chr10 16899125 16899576 -123417189 - L1ME2 LINE L1 -1484 4662 4280 1138 137 4 9 chr10 16899600 16899826 -123416939 - L1HS LINE L1 -13 6142 5918 1228 161 5 0 chr10 16899926 16900112 -123416653 - AluSq SINE Alu -124 189 3 2472 66 0 3 chr10 16901309 16901612 -123415153 + AluY SINE Alu 5 306 -5 1649 217 3 3 chr10 16901778 16902077 -123414688 + AluJo SINE Alu 1 299 -13 904 197 44 6 chr10 16902868 16903051 -123413714 - AluJb SINE Alu -22 290 101 201 299 122 54 chr10 16903777 16903924 -123412841 - MIR SINE MIR -42 220 64 21 57 0 0 chr10 16904024 16904059 -123412706 + AT_rich Low_complexity Low_complexity 1 35 0 245 275 66 0 chr10 16904155 16904246 -123412519 + L1ME4a LINE L1 5486 5582 -660 373 304 92 29 chr10 16904389 16904596 -123412169 + L1ME4a LINE L1 5701 5920 -201 403 278 90 33 chr10 16904793 16905005 -123411760 - L2 LINE L2 0 3313 3090 197 356 98 23 chr10 16905158 16905290 -123411475 - L2 LINE L2 -408 2906 2765 3259 224 48 16 chr10 16905324 16905566 -123411199 + L1ME1 LINE L1 4382 4615 -1551 2150 113 0 17 chr10 16905566 16905867 -123410898 - AluSq SINE Alu -17 296 1 3259 224 48 16 chr10 16905867 16907355 -123409410 + L1ME1 LINE L1 4615 6162 -4 1740 109 34 69 chr10 16908670 16908716 -123408049 - L1PA15 LINE L1 0 6165 6119 2434 110 31 11 chr10 16908716 16909072 -123407693 + THE1B LTR MaLR 1 363 -1 1740 109 34 69 chr10 16909072 16909345 -123407420 - L1PA15 LINE L1 -46 6119 5857 2166 115 0 10 chr10 16909963 16910268 -123406497 - AluSc SINE Alu -7 302 1 253 276 263 6 chr10 16910299 16910455 -123406310 + MIR SINE MIR 54 249 -13 5030 215 177 40 chr10 16910608 16910676 -123406089 - L1MDa LINE L1 -4375 2165 2108 1755 186 42 0 chr10 16910676 16911009 -123405756 + MER7A DNA MER2_type 1 345 -1 5030 215 177 40 chr10 16911009 16911770 -123404995 - L1MDa LINE L1 -4432 2108 1452 1510 183 60 30 chr10 16911770 16912070 -123404695 - AluJb SINE Alu -3 309 1 5030 215 177 40 chr10 16912070 16912145 -123404620 - L1MDa LINE L1 -5088 1452 1389 1789 145 24 17 chr10 16912145 16912434 -123404331 - AluJb SINE Alu -21 291 1 5030 215 177 40 chr10 16912434 16913315 -123403450 - L1MDa LINE L1 -5151 1389 630 288 0 0 0 chr10 16913315 16913347 -123403418 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1718 180 0 23 chr10 16913349 16913649 -123403116 - AluSx SINE Alu -19 293 1 5030 215 177 40 chr10 16913649 16913751 -123403014 - L1MDa LINE L1 -5910 630 13 413 351 59 28 chr10 16913826 16914114 -123402651 - HAL1b LINE L1 -613 735 439 2273 175 24 14 chr10 16916869 16917291 -123399474 + MSTB LTR MaLR 1 426 0 1696 16 0 0 chr10 16917698 16917892 -123398873 + L1PA3 LINE L1 5962 6155 0 867 205 51 0 chr10 16918565 16918760 -123398005 - Tigger1 DNA MER2_type -2213 205 1 2189 208 46 7 chr10 16918765 16919309 -123397456 - L1MCa LINE L1 -5842 584 20 2292 100 0 3 chr10 16919531 16919841 -123396924 - AluSc SINE Alu 0 309 1 964 79 0 0 chr10 16920070 16920197 -123396568 - AluY SINE Alu -184 127 1 3217 208 51 11 chr10 16920198 16921576 -123395189 - L1M4 LINE L1 -400 5778 4348 4057 138 17 9 chr10 16921595 16921758 -123395007 - L1PA16 LINE L1 -1 6165 6005 2512 94 0 76 chr10 16921758 16922152 -123394613 - THE1B LTR MaLR 0 364 1 4057 138 17 9 chr10 16922152 16922683 -123394082 - L1PA16 LINE L1 -161 6005 5465 1255 219 52 39 chr10 16922683 16923132 -123393633 + MLT2B1 LTR ERVL 2 509 -11 3025 250 42 4 chr10 16923160 16923916 -123392849 + ERVL-B1 LTR ERVL 27 811 -4953 249 122 0 75 chr10 16923916 16923989 -123392776 - L1M4 LINE L1 -2220 3926 3859 1848 257 67 19 chr10 16923991 16924005 -123392760 - L1M4 LINE L1 -2937 3209 3197 2572 80 26 0 chr10 16924005 16924356 -123392409 + L1PA13 LINE L1 5803 6162 -1 1848 257 67 19 chr10 16924356 16925290 -123391475 - L1M4 LINE L1 -2949 3197 2215 414 264 72 47 chr10 16925504 16925553 -123391212 - L1M4 LINE L1 -2952 3194 3148 890 185 14 28 chr10 16925553 16925769 -123390996 - L1MA10 LINE L1 -13 6321 6109 414 264 72 47 chr10 16925769 16925954 -123390811 - L1M4 LINE L1 -2998 3148 2954 2476 77 0 6 chr10 16927027 16927339 -123389426 - AluY SINE Alu -1 310 1 666 298 54 6 chr10 16927348 16927680 -123389085 - L1M4 LINE L1 -3265 2881 2534 630 140 19 121 chr10 16927680 16927837 -123388928 - MER6 DNA MER2_type 0 865 4 24 0 0 0 chr10 16928140 16928164 -123388601 + AT_rich Low_complexity Low_complexity 1 24 0 384 306 165 6 chr10 16928219 16928389 -123388376 + MIR SINE MIR 18 214 -48 1882 171 0 10 chr10 16928429 16928734 -123388031 - AluJb SINE Alu -9 303 2 1965 122 16 36 chr10 16929945 16930249 -123386516 - AluSg SINE Alu -12 298 1 942 298 116 17 chr10 16931361 16931714 -123385051 - L2 LINE L2 -2719 595 208 1867 147 7 17 chr10 16932110 16932410 -123384355 + AluSx SINE Alu 1 297 -15 239 313 31 0 chr10 16932715 16932779 -123383986 + (CATG)n Simple_repeat Simple_repeat 2 67 0 792 143 16 0 chr10 16933309 16933435 -123383330 + BC200 scRNA scRNA 2 129 -71 219 36 0 0 chr10 16933437 16933465 -123383300 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2214 96 0 0 chr10 16934639 16934930 -123381835 + AluSg SINE Alu 1 291 -19 1100 199 111 20 chr10 16934935 16935287 -123381478 + L1MB8 LINE L1 5780 6163 -15 6132 154 52 87 chr10 16935353 16935467 -123381298 + L1MCa LINE L1 20 136 -6290 3808 29 0 0 chr10 16935467 16935916 -123380849 + L1PA4 LINE L1 5704 6152 -3 6132 154 52 87 chr10 16935916 16936991 -123379774 + L1MCa LINE L1 136 1147 -5279 1640 43 10 0 chr10 16936991 16937232 -123379533 + L1PA4 LINE L1 5938 6180 0 6132 154 52 87 chr10 16937232 16937570 -123379195 + L1MCa LINE L1 1147 1495 -4931 335 274 42 0 chr10 16937632 16937727 -123379038 + L1MCa LINE L1 2636 2734 -3873 13701 101 1 15 chr10 16937829 16939927 -123376838 + L1PA6 LINE L1 615 2682 -3464 20182 62 9 2 chr10 16940107 16943543 -123373222 + L1PA6 LINE L1 2706 6148 -6 326 80 40 0 chr10 16943557 16943607 -123373158 + MLT2A1 LTR ERVL 393 444 0 25534 105 11 6 chr10 16943607 16947298 -123369467 + HERVL-A1 LTR ERVL 1 3710 -1944 2314 101 0 3 chr10 16947300 16947606 -123369159 - AluSx SINE Alu -7 305 1 1042 119 0 0 chr10 16947612 16947746 -123369019 - AluSg SINE Alu -174 136 3 1452 108 5 0 chr10 16947747 16947961 -123368804 + HERVL-A1 LTR ERVL 3709 3923 -1731 2239 134 3 21 chr10 16948064 16948445 -123368320 - MER4D LTR ERV1 -528 375 2 2251 176 18 18 chr10 16948535 16948983 -123367782 + MLT2B2 LTR ERVL 5 452 -63 997 166 270 10 chr10 16948993 16949282 -123367483 - MER47A DNA MER2_type -2 364 1 198 167 0 0 chr10 16949284 16949320 -123367445 + (TG)n Simple_repeat Simple_repeat 1 36 0 279 159 111 0 chr10 16949323 16949386 -123367379 + MLT2B2 LTR ERVL 451 520 0 1405 249 57 10 chr10 16949387 16949776 -123366989 + ERVL-B2 LTR ERVL 2 408 -5356 1357 181 0 0 chr10 16949776 16949992 -123366773 + AluSg/x SINE Alu 85 300 -10 5133 196 24 26 chr10 16950014 16950597 -123366168 + ERVL-B2 LTR ERVL 401 983 -4781 2009 141 7 3 chr10 16950597 16950901 -123365864 - AluSg SINE Alu -5 305 1 5133 196 24 26 chr10 16950901 16951386 -123365379 + ERVL-B2 LTR ERVL 983 1467 -4297 305 164 0 0 chr10 16951624 16951679 -123365086 - LTR43 LTR ERV1 -325 277 223 4003 210 29 10 chr10 16951920 16952134 -123364631 + ERVL-B2 LTR ERVL 1460 1669 -4095 3098 107 34 0 chr10 16952134 16952179 -123364586 - MLT2A2 LTR ERVL 0 453 411 330 26 0 0 chr10 16952179 16952218 -123364547 + (TG)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr10 16952217 16952244 -123364521 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 3098 107 34 0 chr10 16952218 16952636 -123364129 - MLT2A2 LTR ERVL -42 411 1 4003 210 29 10 chr10 16952636 16953284 -123363481 + ERVL-B2 LTR ERVL 1669 2338 -3426 1726 153 60 0 chr10 16953278 16953579 -123363186 - ERVL LTR ERVL -2062 3702 3384 * 1468 151 28 8 chr10 16953576 16953827 -123362938 + ERVL LTR ERVL 4652 4907 -857 * 2440 144 0 3 chr10 16953837 16954226 -123362539 + ERVL LTR ERVL 2336 2723 -3041 2235 190 65 7 chr10 16954233 16954676 -123362089 - MER21B LTR ERV1 -371 492 24 3782 166 9 6 chr10 16954676 16955331 -123361434 + ERVL LTR ERVL 2709 3365 -2399 1323 155 60 16 chr10 16955327 16955578 -123361187 + ERVL LTR ERVL 1999 2260 -3504 * 5267 172 50 13 chr10 16955580 16956611 -123360154 + ERVL LTR ERVL 3372 4441 -1323 5052 174 17 51 chr10 16956711 16957791 -123358974 + ERVL LTR ERVL 4433 5475 -289 267 346 8 8 chr10 16957795 16957922 -123358843 - L2 LINE L2 -1408 1906 1780 3378 189 29 39 chr10 16959709 16959955 -123356810 + L1MC3 LINE L1 6471 6718 -1067 1510 167 17 33 chr10 16959955 16960370 -123356395 - AluJo SINE Alu 0 312 1 3378 189 29 39 chr10 16960370 16960918 -123355847 + L1MC3 LINE L1 6718 7257 -528 238 295 124 3 chr10 16961796 16962094 -123354671 + L1M4 LINE L1 3605 3938 -2208 741 283 40 17 chr10 16962351 16962651 -123354114 + L1MC4a LINE L1 6559 6865 -943 240 319 60 60 chr10 16962653 16962885 -123353880 + L1M4 LINE L1 11 242 -6300 603 331 121 35 chr10 16963050 16963817 -123352948 - L1 LINE L1 -1336 4810 3978 326 362 26 0 chr10 16963822 16963938 -123352827 + MIR SINE MIR 2 120 -142 304 208 10 21 chr10 16963988 16964084 -123352681 + (TA)n Simple_repeat Simple_repeat 1 95 0 502 203 77 8 chr10 16964086 16964332 -123352433 - L1 LINE L1 -2828 3318 3056 * 1107 264 96 10 chr10 16964324 16964870 -123351895 - L1M4 LINE L1 -2275 3871 3216 186 43 0 0 chr10 16964870 16964893 -123351872 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1107 264 96 10 chr10 16964893 16965015 -123351750 - L1M4 LINE L1 -2930 3216 3106 21 0 0 0 chr10 16965645 16965666 -123351099 + AT_rich Low_complexity Low_complexity 1 21 0 314 270 58 108 chr10 16967765 16968006 -123348759 - L2 LINE L2 -49 3223 2995 2543 55 0 10 chr10 16968034 16968346 -123348419 + AluY SINE Alu 1 309 -2 6308 89 12 0 chr10 16969198 16970279 -123346486 + L1PA8 LINE L1 5066 6158 -14 23 0 0 0 chr10 16970553 16970576 -123346189 + AT_rich Low_complexity Low_complexity 1 23 0 2140 119 7 10 chr10 16971824 16972126 -123344639 - AluSx SINE Alu -11 301 1 929 288 9 0 chr10 16972301 16972527 -123344238 - MIR SINE MIR -31 231 4 29 32 0 48 chr10 16972659 16972688 -123344077 + AT_rich Low_complexity Low_complexity 1 30 -29 1593 185 18 4 chr10 16972688 16972969 -123343796 + AluJo SINE Alu 1 285 -27 29 32 0 48 chr10 16972969 16973001 -123343764 + AT_rich Low_complexity Low_complexity 30 59 0 230 146 85 12 chr10 16974448 16974530 -123342235 + (TA)n Simple_repeat Simple_repeat 1 88 0 2265 111 0 0 chr10 16975850 16976148 -123340617 - AluSx SINE Alu -14 298 1 2792 221 49 37 chr10 16976496 16978239 -123338526 + L1ME1 LINE L1 4206 5963 -203 508 336 66 8 chr10 16980061 16980302 -123336463 - MIR SINE MIR -1 261 7 314 308 136 0 chr10 16980452 16980621 -123336144 - L2 LINE L2 -936 2378 2187 196 91 45 0 chr10 16982374 16982418 -123334347 + (TA)n Simple_repeat Simple_repeat 1 46 0 2381 90 0 0 chr10 16982497 16982798 -123333967 - AluSg SINE Alu -9 301 1 239 153 83 28 chr10 16983818 16983890 -123332875 + L1MEd LINE L1 70 145 -5974 2221 114 0 10 chr10 16984059 16984365 -123332400 - AluSg SINE Alu -7 303 1 225 349 28 9 chr10 16984682 16984791 -123331974 + L1MEd LINE L1 531 641 -5478 1093 134 27 5 chr10 16985260 16985447 -123331318 - L1PB3 LINE L1 -7 6147 5957 507 281 72 26 chr10 16985576 16985967 -123330798 + L1MEd LINE L1 700 1108 -5011 317 319 30 6 chr10 16986289 16986455 -123330310 + L1 LINE L1 3496 3665 -2481 424 238 35 28 chr10 16986581 16986851 -123329914 - LTR52 LTR ERVL -5 416 117 451 282 13 51 chr10 16987159 16987315 -123329450 - LTR33 LTR ERVL -306 215 66 352 249 216 0 chr10 16987345 16987526 -123329239 - L1MDa LINE L1 -4225 2315 2096 10295 92 6 13 chr10 16987882 16989365 -123327400 + HERVL-A1 LTR ERVL 4182 5654 0 3366 86 5 0 chr10 16989365 16989807 -123326958 + MLT2A1 LTR ERVL 1 444 0 393 206 11 11 chr10 16989812 16989904 -123326861 + L1M4c LINE L1 593 684 -5700 195 184 0 0 chr10 16989960 16989998 -123326767 + T-rich Low_complexity Low_complexity 1 38 0 1899 210 25 49 chr10 16990132 16990745 -123326020 + L1M4c LINE L1 676 1273 -5111 * 2092 288 72 85 chr10 16990738 16991931 -123324834 + L1 LINE L1 3700 4877 -1269 421 252 9 28 chr10 16994397 16994504 -123322261 - MER110 LTR ERV1 0 491 387 210 192 0 0 chr10 16994548 16994600 -123322165 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 428 279 34 44 chr10 16994650 16994854 -123321911 - MER110 LTR ERV1 -102 389 188 3558 128 40 3 chr10 16996613 16997220 -123319545 + L1PB2 LINE L1 5523 6151 0 539 181 150 8 chr10 16997220 16997347 -123319418 - MLT1A1 LTR MaLR -220 145 1 4310 225 44 21 chr10 16997356 16998861 -123317904 + L1 LINE L1 3036 4611 -1535 467 273 12 55 chr10 17002117 17002282 -123314483 + L2 LINE L2 3156 3313 0 1649 176 44 7 chr10 17004246 17004541 -123312224 + AluSx SINE Alu 6 311 -1 189 107 0 0 chr10 17006256 17006284 -123310481 + (CA)n Simple_repeat Simple_repeat 2 29 0 1695 171 0 17 chr10 17006598 17006896 -123309869 - AluJb SINE Alu -19 293 1 24 32 0 0 chr10 17007034 17007065 -123309700 + AT_rich Low_complexity Low_complexity 1 31 0 270 281 51 34 chr10 17007077 17007369 -123309396 - L1MEd LINE L1 -4911 1208 912 584 103 35 9 chr10 17007377 17007493 -123309272 + CT-rich Low_complexity Low_complexity 2 120 0 525 318 59 3 chr10 17007533 17007822 -123308943 - L1MEd LINE L1 -5297 822 518 3974 208 23 9 chr10 17007977 17009037 -123307728 - L1MB7 LINE L1 -16 6168 5084 574 221 13 6 chr10 17009071 17009229 -123307536 - L1MEd LINE L1 -5957 162 4 2329 104 0 0 chr10 17009284 17009581 -123307184 - AluSg SINE Alu -13 297 1 453 333 83 15 chr10 17009597 17009803 -123306962 + MIR SINE MIR 34 251 -11 251 323 11 11 chr10 17009971 17010064 -123306701 - MIR SINE MIR -122 140 48 188 83 0 28 chr10 17010245 17010281 -123306484 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 547 209 0 31 chr10 17010281 17010410 -123306355 - MER3 DNA MER1_type -78 131 7 924 71 8 0 chr10 17011317 17011444 -123305321 - THE1C LTR MaLR 0 375 248 919 81 0 0 chr10 17011495 17011618 -123305147 - THE1C LTR MaLR 0 375 253 3648 120 31 21 chr10 17011851 17012201 -123304564 - L1PA16 LINE L1 -16 6150 5790 2338 139 25 3 chr10 17012201 17012568 -123304197 - THE1C LTR MaLR 0 375 1 3648 120 31 21 chr10 17012568 17012832 -123303933 - L1PA16 LINE L1 -376 5790 5530 1548 129 4 0 chr10 17012838 17013079 -123303686 + LOR1a LTR ERV1 256 497 0 428 214 10 0 chr10 17013081 17013179 -123303586 + L1MC2 LINE L1 6246 6344 0 244 395 18 17 chr10 17014236 17014460 -123302305 + MIR SINE MIR 7 226 -36 1277 199 60 9 chr10 17014537 17014854 -123301911 + L1MC2 LINE L1 5987 6319 -25 470 299 9 23 chr10 17015248 17015469 -123301296 + Charlie2a DNA MER1_type 571 788 -2074 943 122 27 4 chr10 17015471 17015659 -123301106 + AluSx SINE Alu 35 301 -11 474 293 46 26 chr10 17015675 17016020 -123300745 + Charlie2a DNA MER1_type 790 1141 -1721 7373 168 7 21 chr10 17016028 17017534 -123299231 + L1P LINE L1 3680 5164 -982 722 128 0 0 chr10 17017534 17017636 -123299129 + AluSq/x SINE Alu 26 127 -185 27 62 0 0 chr10 17017742 17017790 -123298975 + AT_rich Low_complexity Low_complexity 1 48 0 207 195 0 0 chr10 17017835 17017876 -123298889 + (AATTG)n Simple_repeat Simple_repeat 4 44 0 542 176 88 14 chr10 17017878 17018026 -123298739 + Charlie2a DNA MER1_type 1488 1646 -1216 227 149 0 21 chr10 17018051 17018098 -123298667 + (GGAGA)n Simple_repeat Simple_repeat 4 49 0 2222 112 13 0 chr10 17018119 17018423 -123298342 + AluSp SINE Alu 1 308 -5 2250 108 0 3 chr10 17018476 17018771 -123297994 + AluSg1 SINE Alu 1 294 -15 1819 211 110 24 chr10 17018775 17019496 -123297269 + Charlie2a DNA MER1_type 1652 2434 -428 381 227 80 0 chr10 17019609 17019785 -123296980 + Charlie2a DNA MER1_type 2424 2613 -249 2553 161 58 8 chr10 17019824 17020309 -123296456 - L1MB1 LINE L1 0 6168 5660 3983 99 24 10 chr10 17020309 17020893 -123295872 + L1PA10 LINE L1 5567 6158 -10 1372 155 30 15 chr10 17020923 17021188 -123295577 - L1MB1 LINE L1 -494 5674 5406 35 71 0 0 chr10 17021278 17021348 -123295417 + AT_rich Low_complexity Low_complexity 1 70 0 617 240 96 24 chr10 17021362 17021570 -123295195 + MER58A DNA MER1_type 1 223 -1 256 185 31 0 chr10 17021622 17021687 -123295078 - HAL1 LINE L1 -131 2376 2310 1808 286 93 3 chr10 17021956 17022144 -123294621 - L1ME3A LINE L1 -22 6408 6238 2299 122 0 0 chr10 17022144 17022455 -123294310 - AluSq SINE Alu -2 311 1 1808 286 93 3 chr10 17022455 17023049 -123293716 - L1ME3A LINE L1 -192 6238 5555 207 0 0 0 chr10 17023100 17023123 -123293642 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr10 17023123 17023144 -123293621 + AT_rich Low_complexity Low_complexity 1 21 0 800 296 47 51 chr10 17023335 17023490 -123293275 - L1ME3A LINE L1 -1160 5246 5092 2544 39 10 10 chr10 17023490 17023801 -123292964 - AluY SINE Alu 0 311 1 800 296 47 51 chr10 17023801 17024139 -123292626 - L1ME3A LINE L1 -1314 5092 4755 187 255 106 0 chr10 17024146 17024193 -123292572 - L2 LINE L2 -63 3209 3158 215 254 79 0 chr10 17024324 17024387 -123292378 + MER5A DNA MER1_type 100 167 -22 21 0 0 0 chr10 17024425 17024446 -123292319 + AT_rich Low_complexity Low_complexity 1 21 0 581 248 48 61 chr10 17024446 17024769 -123291996 - L1MEc LINE L1 -5039 1401 1069 249 212 94 0 chr10 17025321 17025406 -123291359 - LTR50 LTR ERVL -8 787 695 2450 112 3 0 chr10 17025442 17025798 -123290967 + THE1B LTR MaLR 1 357 -7 633 236 124 32 chr10 17025817 17026170 -123290595 - LTR50 LTR ERVL -190 605 140 265 294 20 26 chr10 17026203 17026356 -123290409 + MER104 DNA Tc2 2 153 -27 6989 25 1 0 chr10 17026483 17027369 -123289396 - L1PA3 LINE L1 -2861 3285 2399 17272 33 0 2 chr10 17027369 17030225 -123286540 + L1PA3 LINE L1 3296 6152 -3 2051 130 7 10 chr10 17030299 17030606 -123286159 - AluSg SINE Alu -4 306 1 1193 223 50 60 chr10 17032085 17032219 -123284546 + MLT1B LTR MaLR 11 145 -245 1899 157 0 7 chr10 17032219 17032500 -123284265 - AluSx SINE Alu -32 280 2 1193 223 50 60 chr10 17032500 17032747 -123284018 + MLT1B LTR MaLR 145 388 -2 3225 84 16 7 chr10 17032947 17033387 -123283378 - MLT2A1 LTR ERVL 0 444 1 3222 128 28 26 chr10 17034851 17035427 -123281338 + MER41B LTR ERV1 44 620 -15 489 299 20 7 chr10 17036435 17036582 -123280183 + MLT2E LTR ERVL 3 151 -477 1814 136 55 0 chr10 17036601 17036909 -123279856 - MER1A DNA MER1_type -1 528 204 22 0 0 0 chr10 17040000 17040022 -123276743 + GC_rich Low_complexity Low_complexity 1 22 0 385 256 17 17 chr10 17040807 17040924 -123275841 - MIR3 SINE MIR -9 199 83 2648 176 6 45 chr10 17040931 17041460 -123275305 + MLT2B3 LTR ERVL 1 508 -46 363 71 0 5 chr10 17041511 17041567 -123275198 + MLT2B3 LTR ERVL 411 554 0 2239 171 68 46 chr10 17043696 17044192 -123272573 + MER67D LTR ERV1 4 510 -4 762 172 8 0 chr10 17044309 17044437 -123272328 - FLAM_C SINE Alu -4 129 1 381 269 84 42 chr10 17044947 17045114 -123271651 - MIR SINE MIR -10 252 79 22 0 0 0 chr10 17045804 17045826 -123270939 + GC_rich Low_complexity Low_complexity 1 22 0 2256 203 8 51 chr10 17045907 17046111 -123270654 - MLT1D LTR MaLR 0 505 294 1346 112 4 116 chr10 17046111 17046209 -123270556 - MER30 DNA MER1_type -1 229 122 2201 102 0 20 chr10 17046209 17046513 -123270252 - AluSx SINE Alu -11 301 4 1346 112 4 116 chr10 17046513 17046672 -123270093 - MER30 DNA MER1_type -108 122 1 2256 203 8 51 chr10 17046672 17046995 -123269770 - MLT1D LTR MaLR -211 294 1 2273 101 3 0 chr10 17047054 17047352 -123269413 + AluSq SINE Alu 1 299 -14 24 53 0 0 chr10 17047672 17047710 -123269055 + AT_rich Low_complexity Low_complexity 1 38 0 1766 103 3 142 chr10 17048438 17048798 -123267967 - AluSg SINE Alu 0 310 1 565 258 6 53 chr10 17049385 17049594 -123267171 - MIR SINE MIR -45 217 20 478 248 72 8 chr10 17050257 17050382 -123266383 + MIR SINE MIR 117 249 -13 22 35 0 0 chr10 17050788 17050817 -123265948 + AT_rich Low_complexity Low_complexity 1 29 0 420 111 0 0 chr10 17050871 17050934 -123265831 + (TA)n Simple_repeat Simple_repeat 2 64 0 400 340 95 42 chr10 17052763 17053004 -123263761 - MIR SINE MIR 0 262 9 372 43 0 0 chr10 17053590 17053636 -123263129 + (GA)n Simple_repeat Simple_repeat 1 46 0 282 326 23 23 chr10 17053740 17053912 -123262853 + L1MCc LINE L1 1180 1351 -5072 1107 276 84 57 chr10 17054083 17054437 -123262328 + L1MCc LINE L1 1544 1887 -5235 1629 207 3 10 chr10 17054437 17054742 -123262023 + AluJo SINE Alu 3 305 -7 1107 276 84 57 chr10 17054742 17055442 -123261323 + L1MCc LINE L1 1887 2854 -4268 348 306 50 0 chr10 17055464 17055578 -123261187 - L1M4c LINE L1 -4929 1455 1333 1933 112 0 4 chr10 17055578 17055847 -123260918 - AluSc SINE Alu -19 290 23 2191 56 0 0 chr10 17056506 17056773 -123259992 + AluY SINE Alu 44 310 -1 21 0 0 0 chr10 17057586 17057607 -123259158 + AT_rich Low_complexity Low_complexity 1 21 0 223 354 9 26 chr10 17059879 17059992 -123256773 - MIR3 SINE MIR -15 193 83 1569 194 31 0 chr10 17059997 17060291 -123256474 + AluJo SINE Alu 1 303 -9 2210 121 0 0 chr10 17060808 17061105 -123255660 + AluSx SINE Alu 1 297 -15 28 48 0 0 chr10 17061154 17061196 -123255569 + AT_rich Low_complexity Low_complexity 1 42 0 1455 237 74 4 chr10 17061270 17061756 -123255009 + L1MCc LINE L1 3410 3929 -3012 1405 234 45 32 chr10 17061755 17062220 -123254545 + L1MA9 LINE L1 5801 6271 -41 * 1210 244 95 5 chr10 17062252 17062766 -123253999 + L1MCc LINE L1 3936 4544 -2397 698 190 259 62 chr10 17063047 17063352 -123253413 + MLT1A1 LTR MaLR 1 365 0 270 136 0 0 chr10 17063407 17063451 -123253314 + (CA)n Simple_repeat Simple_repeat 2 45 0 677 291 112 0 chr10 17063961 17064184 -123252581 + MIR SINE MIR 3 250 -12 369 0 0 0 chr10 17065944 17065985 -123250780 + (CA)n Simple_repeat Simple_repeat 2 42 0 193 280 0 20 chr10 17066078 17066128 -123250637 - L2 LINE L2 -1 3271 3223 270 298 124 0 chr10 17066632 17066753 -123250012 + MIR SINE MIR 57 192 -70 2030 138 0 22 chr10 17066791 17067102 -123249663 + AluSx SINE Alu 1 304 -8 337 289 85 81 chr10 17068881 17069127 -123247638 + L1MC4a LINE L1 5689 5935 -1873 268 313 31 0 chr10 17069306 17069434 -123247331 + L1ME LINE L1 5601 5732 -389 402 224 94 3 chr10 17069607 17069758 -123247007 + L1ME4a LINE L1 1187 6118 -3 2852 7 0 0 chr10 17069917 17070225 -123246540 - AluYa5 SINE Alu -3 308 1 21 0 0 0 chr10 17070228 17070249 -123246516 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 17070332 17070617 -123246148 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 17070825 17070858 -123245907 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 17071108 17071275 -123245490 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 17071588 17071700 -123245065 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 17071733 17072031 -123244734 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 17072922 17073256 -123243509 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 17073349 17073468 -123243297 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 17073469 17073656 -123243109 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 17074058 17074243 -123242522 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 17074412 17074469 -123242296 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 17074790 17074846 -123241919 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 17074975 17074996 -123241769 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 17074996 17075347 -123241418 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 17075347 17075672 -123241093 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 17075672 17075697 -123241068 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 17075697 17075886 -123240879 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 17076170 17076275 -123240490 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 17077709 17077848 -123238917 + AluSq/x SINE Alu 1 139 -174 373 164 0 0 chr10 17077850 17077911 -123238854 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 17077977 17078303 -123238462 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 17078356 17078474 -123238291 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 17078684 17079204 -123237561 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 17079419 17079440 -123237325 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 17079735 17079800 -123236965 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 17080982 17081278 -123235487 + AluY SINE Alu 1 297 -14 5245 172 14 35 chr10 17081279 17082267 -123234498 - L1MB1 LINE L1 -7 6161 5154 711 97 44 0 chr10 17082267 17082380 -123234385 + L1PA13 LINE L1 6046 6163 0 5245 172 14 35 chr10 17082380 17082447 -123234318 - L1MB1 LINE L1 -1014 5154 5087 2306 105 0 0 chr10 17082447 17082751 -123234014 - AluSq SINE Alu -1 312 9 5245 172 14 35 chr10 17082751 17083249 -123233516 - L1MB1 LINE L1 -1081 5087 4653 1223 107 34 11 chr10 17083249 17083426 -123233339 - AluSg SINE Alu -129 181 1 702 322 19 0 chr10 17083583 17083788 -123232977 + MLT1I LTR MaLR 198 406 -3 349 307 35 95 chr10 17083837 17084066 -123232699 + MIR SINE MIR 47 261 -1 458 279 31 0 chr10 17084333 17084462 -123232303 + L2 LINE L2 1491 1623 -1691 2920 204 49 25 chr10 17085017 17085653 -123231112 - MER82 DNA MER2_type -2 651 1 1903 159 130 29 chr10 17085965 17086381 -123230384 - MLT2B1 LTR ERVL -62 458 1 2913 322 73 24 chr10 17086923 17087029 -123229736 + L2 LINE L2 107 206 -3108 2481 121 0 11 chr10 17087029 17087408 -123229357 + THE1C LTR MaLR 1 375 0 2913 322 73 24 chr10 17087408 17088748 -123228017 + L2 LINE L2 206 1623 -1691 369 0 0 0 chr10 17089209 17089250 -123227515 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 271 169 0 chr10 17090483 17090601 -123226164 - L2 LINE L2 -5 3308 3171 330 232 0 0 chr10 17090792 17090848 -123225917 + LTR67 LTR ERVL 113 168 -389 455 235 110 7 chr10 17090954 17091090 -123225675 + LTR67 LTR ERVL 360 509 -48 1588 172 49 0 chr10 17091526 17091793 -123224972 - AluJb SINE Alu -12 300 21 326 154 0 15 chr10 17091823 17091888 -123224877 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5681 52 10 0 chr10 17091889 17092597 -123224168 - L1PA5 LINE L1 -11 6143 5429 3403 33 0 0 chr10 17092597 17093053 -123223712 + L1PA5 LINE L1 4976 5431 -723 901 259 37 27 chr10 17093284 17093578 -123223187 - L1MC4a LINE L1 -1917 5891 5595 2830 13 0 0 chr10 17093600 17093911 -123222854 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr10 17093914 17093935 -123222830 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 17094018 17094303 -123222462 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 17094511 17094544 -123222221 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 17094794 17094961 -123221804 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 17095274 17095386 -123221379 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 17095419 17095717 -123221048 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 17096608 17096942 -123219823 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 17097035 17097154 -123219611 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 17097155 17097342 -123219423 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 17097744 17097929 -123218836 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 17098098 17098155 -123218610 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 17098476 17098532 -123218233 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 17098661 17098682 -123218083 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 17098682 17099033 -123217732 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 17099033 17099358 -123217407 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 17099358 17099383 -123217382 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 17099383 17099572 -123217193 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 17099856 17099961 -123216804 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 17101476 17101615 -123215150 + AluSq/x SINE Alu 1 139 -174 373 164 0 0 chr10 17101617 17101678 -123215087 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 17101744 17102070 -123214695 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 17102123 17102241 -123214524 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 17102451 17102971 -123213794 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 17103186 17103207 -123213558 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 17103502 17103567 -123213198 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 17104749 17105045 -123211720 + AluY SINE Alu 1 297 -14 5245 169 15 31 chr10 17105046 17106034 -123210731 - L1MB1 LINE L1 -7 6161 5159 711 97 44 0 chr10 17106034 17106147 -123210618 + L1PA13 LINE L1 6046 6163 0 5245 169 15 31 chr10 17106147 17106214 -123210551 - L1MB1 LINE L1 -1009 5159 5092 2306 105 0 0 chr10 17106214 17106518 -123210247 - AluSq SINE Alu -1 312 9 5245 169 15 31 chr10 17106518 17107294 -123209471 - L1MB1 LINE L1 -1076 5092 4369 471 335 116 9 chr10 17107428 17107652 -123209113 - MIR SINE MIR -6 256 9 375 314 23 41 chr10 17107925 17108097 -123208668 - MIR3 SINE MIR -14 194 26 1852 137 18 36 chr10 17108277 17108612 -123208153 + L1PA16 LINE L1 5835 6163 -3 413 90 0 45 chr10 17108838 17108905 -123207860 - L1PA13 LINE L1 -11 6152 6089 1112 146 38 42 chr10 17109093 17109354 -123207411 + L1MA1 LINE L1 6031 6290 -12 32 26 0 0 chr10 17109356 17109395 -123207370 + AT_rich Low_complexity Low_complexity 1 39 0 378 0 0 0 chr10 17109500 17109542 -123207223 + (CA)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr10 17110506 17110542 -123206223 + AT_rich Low_complexity Low_complexity 1 36 0 570 311 109 8 chr10 17111514 17111752 -123205013 + MIR SINE MIR 1 262 0 284 250 60 17 chr10 17111983 17112099 -123204666 + L1MCc LINE L1 30 150 -6273 1219 254 82 28 chr10 17112103 17112649 -123204116 + L1MCc LINE L1 1035 1633 -4887 1453 254 75 64 chr10 17112664 17114048 -123202717 + L1MCc LINE L1 2291 3653 -3288 * 1774 245 45 21 chr10 17114042 17114671 -123202094 + L1M4 LINE L1 4724 5367 -779 432 291 80 19 chr10 17114673 17115094 -123201671 + L1ME1 LINE L1 1395 1996 -4829 929 158 0 0 chr10 17115097 17115243 -123201522 - L1PB4 LINE L1 -7 6149 6004 661 179 8 8 chr10 17115565 17115688 -123201077 + FLAM_C SINE Alu 1 123 -20 595 308 56 15 chr10 17115746 17116316 -123200449 + L1ME1 LINE L1 2462 3015 -3629 382 273 45 64 chr10 17116478 17116742 -123200023 - L1ME1 LINE L1 -2195 4449 4191 910 272 129 36 chr10 17116742 17117385 -123199380 + L1ME1 LINE L1 4450 5152 -1492 542 295 138 41 chr10 17117826 17118124 -123198641 + L1ME1 LINE L1 5771 6039 -625 1598 191 90 0 chr10 17118124 17118459 -123198306 + MER47A DNA MER2_type 2 366 0 542 295 138 41 chr10 17118459 17118719 -123198046 + L1ME1 LINE L1 6039 6383 -281 356 303 111 59 chr10 17119280 17119752 -123197013 - L2 LINE L2 -883 2431 1985 4114 114 3 5 chr10 17119752 17120373 -123196392 + L1PA14 LINE L1 5535 6154 -7 225 0 0 0 chr10 17120373 17120398 -123196367 + (CA)n Simple_repeat Simple_repeat 2 26 0 356 303 111 59 chr10 17120398 17120446 -123196319 - L2 LINE L2 -1328 1986 1883 1540 153 4 7 chr10 17120617 17120898 -123195867 + L1PA14 LINE L1 5875 6154 -7 225 0 0 0 chr10 17120898 17120923 -123195842 + (CA)n Simple_repeat Simple_repeat 2 26 0 736 143 0 0 chr10 17122086 17122191 -123194574 - AluSq/x SINE Alu -208 105 1 1711 177 0 24 chr10 17122440 17122728 -123194037 + AluJo SINE Alu 1 281 -31 314 329 63 50 chr10 17123029 17123251 -123193514 + L3 LINE CR1 1322 1546 -31 1777 238 60 7 chr10 17124024 17124252 -123192513 - MLT1D LTR MaLR 0 505 291 1667 108 67 131 chr10 17124252 17124640 -123192125 + THE1B LTR MaLR 1 363 -1 1777 238 60 7 chr10 17124640 17124827 -123191938 - MLT1D LTR MaLR -214 291 68 227 109 196 0 chr10 17124831 17124877 -123191888 + MADE1 DNA Mariner 1 55 -25 245 170 0 0 chr10 17125002 17125049 -123191716 - MADE1 DNA Mariner -33 47 1 251 257 9 24 chr10 17126800 17126978 -123189787 + GA-rich Low_complexity Low_complexity 1 175 0 429 193 8 9 chr10 17128414 17128504 -123188261 - MER58A DNA MER1_type -17 90 1 611 162 10 0 chr10 17128695 17128794 -123187971 - MER66B LTR ERV1 -7 479 380 7368 37 7 0 chr10 17128810 17129702 -123187063 - L1PA5 LINE L1 -3 6151 5254 826 208 117 10 chr10 17129706 17129903 -123186862 - MER66A LTR ERV1 -92 386 169 467 170 57 92 chr10 17129879 17130020 -123186745 - MER41A LTR ERV1 -252 302 167 * 298 121 0 69 chr10 17130837 17130895 -123185870 + MIR SINE MIR 121 174 -88 1921 176 0 0 chr10 17132338 17132650 -123184115 + AluJb SINE Alu 1 312 0 275 236 39 94 chr10 17132736 17132863 -123183902 + MER94 DNA DNA 1 120 -14 425 372 54 4 chr10 17133089 17133328 -123183437 + HAL1b LINE L1 671 921 -427 22 0 0 0 chr10 17133481 17133503 -123183262 + AT_rich Low_complexity Low_complexity 1 22 0 524 283 167 32 chr10 17133599 17133811 -123182954 + L1MC/D LINE L1 5272 5541 -2267 2891 152 22 2 chr10 17133811 17134319 -123182446 - L1MC1 LINE L1 -1 6332 5815 524 283 167 32 chr10 17134319 17134417 -123182348 + L1MC/D LINE L1 5541 5624 -2184 2041 145 0 7 chr10 17134697 17134994 -123181771 + AluJb SINE Alu 1 295 -17 187 200 22 0 chr10 17135040 17135085 -123181680 - L2 LINE L2 0 3313 3268 2148 86 0 0 chr10 17137078 17137346 -123179419 - AluSc SINE Alu -19 290 23 305 287 57 25 chr10 17137405 17137527 -123179238 - L1MEd LINE L1 -5018 1101 976 1273 217 138 40 chr10 17138043 17138448 -123178317 - MSTB2 LTR MaLR -12 445 1 310 340 44 19 chr10 17138968 17139174 -123177591 - ERVL LTR ERVL -3789 1975 1765 226 256 58 44 chr10 17139591 17139728 -123177037 - L1M4 LINE L1 -2323 3823 3685 21 82 0 0 chr10 17140233 17140282 -123176483 + AT_rich Low_complexity Low_complexity 1 49 0 702 289 69 39 chr10 17140492 17140856 -123175909 - L1MC/D LINE L1 -2012 5796 5422 1250 261 87 0 chr10 17140870 17141261 -123175504 - L1ME2 LINE L1 -13 6151 5727 652 228 54 81 chr10 17141258 17141503 -123175262 - L1ME2 LINE L1 -690 5472 5243 * 4425 23 0 0 chr10 17141503 17142020 -123174745 - L1PA3 LINE L1 -2 6153 5637 652 228 54 81 chr10 17142020 17142182 -123174583 - L1ME2 LINE L1 -919 5243 5078 413 295 16 0 chr10 17142198 17142327 -123174438 - L1ME2 LINE L1 -2065 4081 3951 226 256 12 12 chr10 17142344 17142355 -123174410 - L1MA10 LINE L1 -2 6332 6322 1951 233 70 7 chr10 17142355 17142909 -123173856 - L1ME1 LINE L1 -4 6231 5643 4587 219 47 23 chr10 17142981 17144346 -123172419 - L1ME1 LINE L1 -1814 4401 3004 2094 147 0 0 chr10 17144510 17144823 -123171942 - AluSq SINE Alu 0 313 1 445 326 74 16 chr10 17144922 17145232 -123171533 - L1ME1 LINE L1 -6034 362 35 23 0 0 0 chr10 17145333 17145356 -123171409 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr10 17145417 17145469 -123171296 + AT_rich Low_complexity Low_complexity 1 52 0 269 192 0 68 chr10 17145689 17145762 -123171003 + (CATA)n Simple_repeat Simple_repeat 2 69 0 1064 244 109 56 chr10 17146522 17146570 -123170195 - L1MB1 LINE L1 -1 6167 6123 1807 176 0 0 chr10 17146570 17146871 -123169894 - AluJo SINE Alu -3 309 9 1064 244 109 56 chr10 17146871 17147053 -123169712 - L1MB1 LINE L1 -45 6123 5952 2334 124 13 3 chr10 17147053 17147431 -123169334 - L1PB2 LINE L1 -2 6149 5768 1064 244 109 56 chr10 17147431 17147921 -123168844 - L1MB1 LINE L1 -216 5952 5638 3464 160 9 8 chr10 17147432 17147554 -123169211 - L1PA11 LINE L1 -20 6154 6034 1559 64 0 27 chr10 17147554 17147774 -123168991 - L1PA5 LINE L1 0 6154 5941 3464 160 9 8 chr10 17147774 17148842 -123167923 - L1PA11 LINE L1 -140 6034 4720 3996 200 11 55 chr10 17148942 17149097 -123167668 - L1 LINE L1 -1828 4318 4158 5881 115 24 33 chr10 17149097 17149419 -123167346 - L1PA14 LINE L1 -4 6157 5834 2517 71 0 3 chr10 17149419 17149730 -123167035 - AluY SINE Alu -1 310 1 5881 115 24 33 chr10 17149730 17150378 -123166387 - L1PA14 LINE L1 -327 5834 5189 224 29 0 29 chr10 17150378 17150412 -123166353 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5881 115 24 33 chr10 17150412 17150731 -123166034 - L1PA14 LINE L1 -972 5189 4869 3996 200 11 55 chr10 17150731 17151621 -123165144 - L1 LINE L1 -1988 4158 3320 255 93 0 0 chr10 17151853 17151896 -123164869 + (T)n Simple_repeat Simple_repeat 1 43 0 7313 39 2 0 chr10 17152454 17153726 -123163039 + L1PA4 LINE L1 4874 6147 -8 581 178 25 0 chr10 17153770 17153888 -123162877 - MSTD LTR MaLR 0 396 276 570 236 54 49 chr10 17154077 17154397 -123162368 - MSTC LTR MaLR -41 324 1 1278 142 5 19 chr10 17154442 17154653 -123162112 - AluSg/x SINE Alu -24 288 81 4161 94 14 2 chr10 17154658 17155245 -123161520 - L1PA10 LINE L1 0 6168 5575 1166 157 0 0 chr10 17155281 17155459 -123161306 + AluSg/x SINE Alu 132 309 -1 283 349 48 18 chr10 17155484 17155650 -123161115 - MLT1J2 LTR MaLR -39 411 241 281 233 0 0 chr10 17155711 17155771 -123160994 - MLT1I LTR MaLR -257 152 93 287 262 79 43 chr10 17156161 17156325 -123160440 + MLT1L LTR MaLR 433 602 -13 3022 93 7 2 chr10 17156349 17156778 -123159987 + L1PA10 LINE L1 5717 6147 -21 180 0 0 0 chr10 17156778 17156798 -123159967 + (TTAAA)n Simple_repeat Simple_repeat 1 20 0 2366 93 0 0 chr10 17156904 17157206 -123159559 - AluSg SINE Alu -8 302 1 805 190 5 5 chr10 17158100 17158305 -123158460 - L1 LINE L1 -1647 4499 4295 1726 135 0 43 chr10 17158308 17158633 -123158132 - L1MB1 LINE L1 -198 5970 5660 256 393 34 0 chr10 17159032 17159149 -123157616 - L2 LINE L2 -1 3271 3151 1254 136 54 54 chr10 17159192 17159471 -123157294 + Tigger2a DNA MER2_type 1 279 -155 1943 161 65 13 chr10 17159476 17159927 -123156838 - L1M3 LINE L1 -495 5673 5197 929 196 27 9 chr10 17159943 17160168 -123156597 - L1M3 LINE L1 -1756 4390 4162 2085 133 0 0 chr10 17160170 17160487 -123156278 - L1PA14 LINE L1 -4 6157 5841 2725 42 0 0 chr10 17160492 17160803 -123155962 - AluY SINE Alu 0 311 1 422 295 16 0 chr10 17160962 17161084 -123155681 + MLT1I LTR MaLR 67 190 -219 879 200 0 0 chr10 17161466 17161626 -123155139 - L1PB4 LINE L1 -5 6151 5992 2094 135 0 0 chr10 17162637 17162926 -123153839 - AluSx SINE Alu -22 290 2 1514 304 70 34 chr10 17162959 17163978 -123152787 - L1M3a LINE L1 -4917 1038 302 1348 290 20 26 chr10 17164092 17164547 -123152218 - L1M3a LINE L1 -5503 452 1 3504 73 0 0 chr10 17164720 17165187 -123151578 - Harlequin LTR ERV1 -5730 2896 2430 * 3672 68 0 0 chr10 17165172 17165644 -123151121 - Harlequin LTR ERV1 -6612 2014 1543 3416 99 23 5 chr10 17165663 17166016 -123150749 - Harlequin LTR ERV1 -5087 1809 1464 315 0 0 0 chr10 17166016 17166051 -123150714 + (TG)n Simple_repeat Simple_repeat 2 36 0 3416 99 23 5 chr10 17166051 17166448 -123150317 - Harlequin LTR ERV1 -5432 1464 1001 1758 98 167 164 chr10 17166456 17167194 -123149571 + LTR12 LTR ERV1 57 560 -154 1947 169 156 30 chr10 17168055 17168580 -123148185 - LTR49 LTR ERV1 -4 591 1 793 160 12 59 chr10 17168947 17169081 -123147684 - MER4E LTR ERV1 -7 772 646 3138 124 28 57 chr10 17169081 17169644 -123147121 + LTR10B LTR ERV1 1 547 0 793 160 12 59 chr10 17169644 17169678 -123147087 - MER4E LTR ERV1 -133 646 612 666 165 0 0 chr10 17169678 17169781 -123146984 - AluSq/x SINE Alu -210 103 1 338 165 8 75 chr10 17170309 17170436 -123146329 - MER41B LTR ERV1 -9 597 401 1644 112 0 9 chr10 17170437 17170567 -123146198 + AluSq SINE Alu 1 130 -183 227 31 31 0 chr10 17170567 17170599 -123146166 + (TA)n Simple_repeat Simple_repeat 2 34 0 1644 112 0 9 chr10 17170599 17170692 -123146073 + AluSq SINE Alu 130 222 -91 3960 52 12 0 chr10 17170692 17171176 -123145589 + LTR2B LTR ERV1 1 490 0 520 139 0 0 chr10 17171176 17171248 -123145517 + AluSq SINE Alu 219 290 -23 22 0 0 0 chr10 17171248 17171270 -123145495 + AT_rich Low_complexity Low_complexity 1 22 0 622 200 73 33 chr10 17171270 17171445 -123145320 + FAM SINE Alu 1 45 0 1962 192 2 35 chr10 17171452 17171880 -123144885 - MER41B LTR ERV1 -108 527 114 21 0 0 0 chr10 17171898 17171919 -123144846 + AT_rich Low_complexity Low_complexity 1 21 0 268 270 16 0 chr10 17172310 17172373 -123144392 + L2 LINE L2 3186 3249 -23 2372 102 10 0 chr10 17172503 17172808 -123143957 + AluSc SINE Alu 1 308 -1 226 83 0 62 chr10 17173792 17173840 -123142925 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 28 61 0 0 chr10 17173942 17173991 -123142774 + AT_rich Low_complexity Low_complexity 1 49 0 13848 152 34 17 chr10 17174110 17177599 -123139166 - L1MA2 LINE L1 -4 7719 4123 1594 221 14 0 chr10 17177599 17177888 -123138877 + AluJb SINE Alu 1 293 -19 13848 152 34 17 chr10 17177888 17179025 -123137740 - L1MA2 LINE L1 -3600 4123 3007 5007 127 34 42 chr10 17179052 17180123 -123136642 - L1PB1 LINE L1 -2 6149 5090 * 13107 158 138 4 chr10 17180110 17180123 -123136642 - L1MA2 LINE L1 -4532 3033 3023 835 85 0 0 chr10 17180123 17180229 -123136536 - U6 snRNA snRNA 0 107 2 13107 158 138 4 chr10 17180229 17182871 -123133894 - L1MA2 LINE L1 -4542 3023 23 2039 154 3 0 chr10 17183060 17183371 -123133394 + AluSx SINE Alu 1 312 0 370 204 61 0 chr10 17183671 17183769 -123132996 - MER97a DNA MER1_type? -717 177 74 1582 204 0 7 chr10 17184164 17184448 -123132317 + AluJb SINE Alu 1 282 -30 263 313 125 32 chr10 17184940 17185221 -123131544 + MLT1J LTR MaLR 124 430 -81 569 211 58 53 chr10 17185463 17185671 -123131094 - MER3 DNA MER1_type 0 209 1 323 311 72 5 chr10 17185691 17185884 -123130881 - L1ME LINE L1 -516 5637 5432 496 308 46 23 chr10 17185987 17186426 -123130339 - L1ME LINE L1 -1095 5034 4586 983 201 75 61 chr10 17186472 17186895 -123129870 + MLT1D LTR MaLR 44 505 0 3922 240 20 54 chr10 17186896 17188129 -123128636 + MLT1D-int LTR MaLR 2 1192 -179 226 229 0 0 chr10 17188127 17188175 -123128590 - MLT1-int LTR MaLR -668 703 656 * 269 152 0 0 chr10 17188182 17188228 -123128537 + MLT1D-int LTR MaLR 1187 1232 -139 2183 121 7 0 chr10 17188229 17188526 -123128239 - AluSx SINE Alu -9 303 5 11781 45 7 0 chr10 17188583 17190818 -123125947 - L1PA5 LINE L1 -13 6141 3899 9740 44 1 2 chr10 17190819 17192109 -123124656 + L1PA5 LINE L1 2594 3881 -2265 435 219 41 0 chr10 17192128 17192251 -123124514 + MLT1D-int LTR MaLR 1237 1364 -7 1040 246 111 35 chr10 17192258 17192710 -123124055 + MLT1D LTR MaLR 1 486 -19 647 319 129 18 chr10 17192730 17193294 -123123471 - L1ME LINE L1 -1549 4580 3954 337 258 47 30 chr10 17193394 17193650 -123123115 - L1MEc LINE L1 -4865 1290 993 315 281 9 83 chr10 17193746 17193905 -123122860 - L1M4 LINE L1 -2913 3233 3094 2239 102 10 19 chr10 17193905 17194219 -123122546 - AluY SINE Alu 0 311 1 315 281 9 83 chr10 17194219 17194287 -123122478 - L1M4 LINE L1 -3052 3094 3023 23 33 0 0 chr10 17194389 17194419 -123122346 + AT_rich Low_complexity Low_complexity 1 30 0 2579 126 30 0 chr10 17194463 17194868 -123121897 - L1PA10 LINE L1 -18 6150 5734 4284 78 23 11 chr10 17194868 17195883 -123120882 - MER11A LTR ERVK -1 1265 1 2454 107 77 5 chr10 17195883 17196587 -123120178 - L1PA10 LINE L1 -391 5740 4879 1609 223 0 3 chr10 17197203 17197504 -123119261 - AluJo SINE Alu -12 300 1 252 330 96 59 chr10 17197643 17198206 -123118559 - L1MEc LINE L1 -5487 632 49 2268 113 0 0 chr10 17198249 17198550 -123118215 - AluSx SINE Alu -11 301 1 226 270 68 27 chr10 17198575 17198723 -123118042 - L1MC/D LINE L1 -1894 5914 5761 3754 148 19 28 chr10 17199007 17199103 -123117662 - L1MA7 LINE L1 -9 6282 6187 2114 117 0 37 chr10 17199103 17199427 -123117338 + AluSq SINE Alu 1 312 -1 3754 148 19 28 chr10 17199427 17199695 -123117070 - L1MA7 LINE L1 -104 6187 5918 2157 177 78 0 chr10 17199695 17200090 -123116675 + MSTB LTR MaLR 1 426 0 3754 148 19 28 chr10 17200090 17200445 -123116320 - L1MA7 LINE L1 -373 5918 5568 403 285 119 55 chr10 17200462 17200600 -123116165 - L1MC/D LINE L1 -369 5752 5624 1760 97 0 0 chr10 17200600 17200827 -123115938 + AluSg/x SINE Alu 84 310 -2 403 285 119 55 chr10 17200827 17201109 -123115656 - L1MC/D LINE L1 -497 5624 5305 2100 120 10 3 chr10 17201774 17202074 -123114691 - AluSc SINE Alu -7 302 1 355 301 81 40 chr10 17202399 17202572 -123114193 - MER5A DNA MER1_type -3 186 7 529 253 26 52 chr10 17202602 17202796 -123113969 + MER5A DNA MER1_type 1 189 0 306 375 44 7 chr10 17202803 17202939 -123113826 + MIR3 SINE MIR 37 177 -31 2468 80 0 0 chr10 17203096 17203395 -123113370 - AluSg SINE Alu -11 299 1 403 323 117 9 chr10 17206183 17206406 -123110359 + MIR SINE MIR 2 248 -14 367 191 227 9 chr10 17206988 17207098 -123109667 - L2 LINE L2 -2 3311 3178 383 308 42 28 chr10 17207305 17207519 -123109246 + HERV16 LTR ERVL 3472 3688 -1308 633 351 40 23 chr10 17207733 17207939 -123108826 + HERV16 LTR ERVL 4482 4683 -971 1823 146 40 45 chr10 17207939 17208316 -123108449 - THE1C LTR MaLR 0 375 1 633 351 40 23 chr10 17208316 17208631 -123108134 + HERV16 LTR ERVL 4683 5012 -642 308 256 84 23 chr10 17208665 17208842 -123107923 + L1M4 LINE L1 2331 2564 -3902 2852 233 58 57 chr10 17209419 17210903 -123105862 + L1M4 LINE L1 4066 5550 -832 2541 269 54 20 chr10 17210922 17211831 -123104934 + L1MEc LINE L1 37 976 -5420 374 289 103 0 chr10 17211835 17211991 -123104774 + L1M4c LINE L1 3518 3689 -2693 246 244 118 14 chr10 17212012 17212134 -123104631 + MIR SINE MIR 24 226 -36 1608 133 29 65 chr10 17212136 17212248 -123104517 + AluJb SINE Alu 1 115 -197 2050 125 47 33 chr10 17212248 17212607 -123104158 + THE1B LTR MaLR 1 364 0 1608 133 29 65 chr10 17212607 17212827 -123103938 + AluJb SINE Alu 115 312 0 21 71 0 0 chr10 17213081 17213123 -123103642 + AT_rich Low_complexity Low_complexity 1 42 0 733 287 75 35 chr10 17213323 17213839 -123102926 + HAL1b LINE L1 282 743 -605 23 0 0 0 chr10 17213888 17213911 -123102854 + AT_rich Low_complexity Low_complexity 1 23 0 299 146 0 0 chr10 17214112 17214160 -123102605 - MLT2B1 LTR ERVL 0 397 350 2222 95 0 17 chr10 17214191 17214487 -123102278 + AluY SINE Alu 1 291 -20 191 36 36 0 chr10 17214487 17214515 -123102250 + (TA)n Simple_repeat Simple_repeat 2 30 0 848 272 110 35 chr10 17214534 17214987 -123101778 - MLT2B1 LTR ERVL -20 462 1 1596 285 41 10 chr10 17214987 17215503 -123101262 + L1ME2 LINE L1 28 559 -5486 2057 132 44 22 chr10 17215555 17215900 -123100865 + MLT1B LTR MaLR 18 373 -17 1320 224 128 14 chr10 17215900 17216253 -123100512 - MSTD LTR MaLR 0 396 4 2057 132 44 22 chr10 17216253 17216271 -123100494 + MLT1B LTR MaLR 373 389 -1 228 111 0 0 chr10 17216278 17216314 -123100451 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2026 239 138 26 chr10 17216319 17216728 -123100037 + L1ME2 LINE L1 577 939 -5625 2024 119 20 3 chr10 17216728 17217022 -123099743 + AluSx SINE Alu 11 309 -3 2026 239 138 26 chr10 17217022 17218472 -123098293 + L1ME2 LINE L1 939 2225 -4339 1797 130 105 0 chr10 17218472 17218748 -123098017 - AluSq SINE Alu -8 305 1 2026 239 138 26 chr10 17218748 17219713 -123097052 + L1ME2 LINE L1 2225 3860 -2704 * 5103 172 33 18 chr10 17219710 17221742 -123095023 + L1PA16 LINE L1 4103 6161 -5 4024 223 36 50 chr10 17221818 17221994 -123094771 + L1ME2 LINE L1 3938 4115 -2449 1822 134 43 33 chr10 17221994 17222293 -123094472 + AluJo SINE Alu 1 302 -10 4865 171 20 39 chr10 17222293 17223279 -123093486 + LTR5 LTR ERVK 2 969 0 4024 223 36 50 chr10 17223279 17223777 -123092988 + L1ME2 LINE L1 4114 4617 -1947 612 254 0 0 chr10 17223777 17223907 -123092858 + FLAM_A SINE Alu 1 130 -3 4024 223 36 50 chr10 17223907 17224628 -123092137 + L1ME2 LINE L1 4617 5316 -1248 1129 240 62 22 chr10 17224624 17224982 -123091783 + L1ME2 LINE L1 6119 6490 -92 * 1180 226 0 0 chr10 17224982 17225248 -123091517 + L1PA15 LINE L1 4124 4389 -1757 294 196 0 0 chr10 17225247 17225303 -123091462 + L1PA16 LINE L1 6031 6086 -80 * 4985 139 15 24 chr10 17225311 17226249 -123090516 + L1PA15 LINE L1 4397 5323 -842 2389 57 0 0 chr10 17226249 17226553 -123090212 + AluY SINE Alu 1 304 0 4985 139 15 24 chr10 17226553 17227388 -123089377 + L1PA15 LINE L1 5323 6164 -1 491 167 0 0 chr10 17227393 17227477 -123089288 + L1ME2 LINE L1 6486 6569 -13 317 304 140 27 chr10 17227649 17227879 -123088886 - MIR SINE MIR -3 259 7 2199 112 0 10 chr10 17228229 17228542 -123088223 + AluSg SINE Alu 1 310 0 1438 218 0 24 chr10 17229767 17230061 -123086704 + AluJo SINE Alu 3 289 -23 312 106 0 0 chr10 17230070 17230117 -123086648 - Charlie5 DNA MER1_type -2521 91 45 206 288 0 0 chr10 17230416 17230475 -123086290 + CT-rich Low_complexity Low_complexity 2 60 0 195 69 0 0 chr10 17231692 17231721 -123085044 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 646 115 10 0 chr10 17231721 17231817 -123084948 - AluJ SINE Alu -33 279 183 762 162 0 0 chr10 17231833 17231950 -123084815 - AluJ SINE Alu -191 121 5 345 323 64 86 chr10 17232079 17232590 -123084175 + L2 LINE L2 2727 3221 -51 378 189 28 0 chr10 17232648 17232754 -123084011 + GA-rich Low_complexity Low_complexity 4 112 0 203 233 0 23 chr10 17232855 17232898 -123083867 + polypurine Low_complexity Low_complexity 4 45 0 820 169 3 20 chr10 17232898 17233245 -123083520 + GA-rich Low_complexity Low_complexity 1 340 0 29 0 0 0 chr10 17234239 17234268 -123082497 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 17234891 17234915 -123081850 + (TA)n Simple_repeat Simple_repeat 2 25 0 658 287 39 4 chr10 17235542 17235800 -123080965 - MER102a DNA MER1_type -10 320 54 186 300 140 20 chr10 17235871 17235971 -123080794 - MIR3 SINE MIR -46 162 51 517 296 75 40 chr10 17235995 17236194 -123080571 + MIR SINE MIR 44 249 -13 3540 132 3 19 chr10 17236323 17236578 -123080187 + L1PA13 LINE L1 5578 5835 -328 2265 110 0 0 chr10 17236578 17236870 -123079895 + AluSg SINE Alu 1 292 -18 3540 132 3 19 chr10 17236870 17237205 -123079560 + L1PA13 LINE L1 5835 6159 -4 21 0 0 0 chr10 17237245 17237266 -123079499 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr10 17237658 17237682 -123079083 + (A)n Simple_repeat Simple_repeat 1 24 0 446 194 130 28 chr10 17239224 17239332 -123077433 + FLAM_C SINE Alu 5 123 -20 420 148 139 30 chr10 17239342 17239443 -123077322 + FLAM_C SINE Alu 16 127 -16 1701 247 67 15 chr10 17239650 17239911 -123076854 - MLT1D LTR MaLR 0 505 259 1939 157 7 7 chr10 17239911 17240217 -123076548 - AluSx SINE Alu -6 306 1 1701 247 67 15 chr10 17240217 17240433 -123076332 - MLT1D LTR MaLR -246 259 3 3121 117 32 2 chr10 17240839 17241334 -123075431 - L1PA16 LINE L1 -11 6155 5646 1280 210 118 13 chr10 17241335 17241843 -123074922 - L1M4 LINE L1 -734 5440 4892 1840 160 0 3 chr10 17241845 17242127 -123074638 + AluSx SINE Alu 2 282 -30 354 324 88 12 chr10 17242585 17242755 -123074010 - MIR SINE MIR -72 190 8 207 226 130 61 chr10 17245309 17245424 -123071341 - L2 LINE L2 -1 3312 3190 746 261 32 110 chr10 17245639 17245892 -123070873 - L2 LINE L2 -9 3304 3088 2039 129 0 11 chr10 17245892 17246179 -123070586 + AluSx SINE Alu 1 284 -28 746 261 32 110 chr10 17246179 17246297 -123070468 - L2 LINE L2 -225 3088 2962 21 0 0 0 chr10 17246365 17246386 -123070379 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 17246441 17246479 -123070286 + AT_rich Low_complexity Low_complexity 1 38 0 320 366 113 17 chr10 17247327 17247610 -123069155 - L2 LINE L2 -261 3011 2690 1566 227 47 20 chr10 17248006 17248456 -123068309 - LTR40b LTR ERVL 0 462 1 252 309 53 0 chr10 17248460 17248554 -123068211 + MIR SINE MIR 77 175 -87 211 321 107 0 chr10 17248949 17249033 -123067732 + MIR SINE MIR 167 259 -3 1900 154 90 29 chr10 17249472 17249815 -123066950 - THE1B LTR MaLR 0 364 1 573 278 73 19 chr10 17251343 17251548 -123065217 + MIR SINE MIR 17 232 -30 1887 171 0 3 chr10 17251596 17251906 -123064859 + AluJo SINE Alu 1 309 -3 31 26 0 0 chr10 17251951 17251989 -123064776 + AT_rich Low_complexity Low_complexity 1 38 0 1580 170 10 20 chr10 17253979 17254273 -123062492 + AluJo SINE Alu 9 299 -13 245 286 41 129 chr10 17254656 17254714 -123062051 + L2 LINE L2 3137 3199 -73 2103 137 3 10 chr10 17254714 17255028 -123061737 + AluSx SINE Alu 1 312 0 245 286 41 129 chr10 17255028 17255116 -123061649 + L2 LINE L2 3199 3270 -2 2668 111 19 5 chr10 17255158 17255528 -123061237 + THE1C LTR MaLR 1 375 0 1630 162 25 14 chr10 17255678 17255962 -123060803 + AluJo SINE Alu 1 287 -25 183 296 96 48 chr10 17256010 17256135 -123060630 - MIR3 SINE MIR -65 143 13 1852 179 0 0 chr10 17257516 17257828 -123058937 - AluJb SINE Alu 0 312 1 4431 195 48 6 chr10 17258300 17258357 -123058408 + L1MB8 LINE L1 4959 5012 -1166 2375 129 33 33 chr10 17258357 17258721 -123058044 - THE1B LTR MaLR 0 364 1 4431 195 48 6 chr10 17258721 17259837 -123056928 + L1MB8 LINE L1 5012 6178 0 262 301 50 96 chr10 17259839 17260141 -123056624 - L2 LINE L2 -1317 1997 1710 651 200 0 0 chr10 17260177 17260282 -123056483 + FLAM_C SINE Alu 2 106 -37 186 368 47 47 chr10 17260320 17260491 -123056274 - L2 LINE L2 -2010 1304 1134 772 165 0 24 chr10 17260657 17260784 -123055981 - FLAM_C SINE Alu -6 137 14 260 346 108 42 chr10 17260822 17261183 -123055582 - L2 LINE L2 -2375 939 555 355 353 16 8 chr10 17261747 17261869 -123054896 + L2 LINE L2 3191 3313 0 310 266 53 18 chr10 17262206 17262319 -123054446 + MER103 DNA DNA 5 121 -45 2069 136 0 7 chr10 17262364 17262666 -123054099 - AluSx SINE Alu -12 300 1 630 267 0 0 chr10 17263805 17263936 -123052829 - FLAM_A SINE Alu 0 133 3 400 250 54 9 chr10 17263940 17264052 -123052713 + L2 LINE L2 3196 3312 -1 441 237 108 22 chr10 17264107 17264246 -123052519 - MIR SINE MIR -92 170 20 570 220 55 3 chr10 17264251 17264666 -123052099 - MER20B DNA MER1_type -8 775 285 787 150 0 17 chr10 17264696 17264816 -123051949 - FLAM_C SINE Alu -15 118 1 1698 166 32 21 chr10 17264996 17265428 -123051337 - L1MA4A LINE L1 -23 6280 5783 209 238 0 0 chr10 17265429 17265471 -123051294 + (TA)n Simple_repeat Simple_repeat 1 42 0 307 315 0 0 chr10 17265472 17265561 -123051204 - L1MC4 LINE L1 -1339 6703 6615 213 39 0 0 chr10 17265561 17265587 -123051178 + (CA)n Simple_repeat Simple_repeat 1 26 0 1426 134 84 8 chr10 17265587 17265848 -123050917 - L1M1 LINE L1 -514 5789 5509 323 155 0 17 chr10 17266681 17266739 -123050026 + MIR3 SINE MIR 149 205 -3 1864 161 3 20 chr10 17267024 17267159 -123049606 + AluJb SINE Alu 1 137 -175 2101 90 43 0 chr10 17267159 17267437 -123049328 + AluSc SINE Alu 1 290 -19 651 26 0 0 chr10 17267438 17267515 -123049250 + (TA)n Simple_repeat Simple_repeat 1 77 0 1864 161 3 20 chr10 17267515 17267676 -123049089 + AluJb SINE Alu 136 294 -18 738 170 0 0 chr10 17269317 17269423 -123047342 + FLAM_C SINE Alu 13 118 -25 823 193 23 12 chr10 17269433 17269819 -123046946 + GA-rich Low_complexity Low_complexity 1 390 0 2030 156 38 38 chr10 17270672 17271045 -123045720 - THE1C LTR MaLR 0 375 3 792 196 0 0 chr10 17271073 17271206 -123045559 + AluJo SINE Alu 3 135 -177 244 259 165 0 chr10 17272210 17272295 -123044470 - L1ME LINE L1 -530 5640 5542 7006 126 60 37 chr10 17272315 17273433 -123043332 - Tigger3b DNA MER2_type -1797 1231 82 2194 110 10 3 chr10 17273433 17273734 -123043031 - AluSq SINE Alu -10 303 1 7006 126 60 37 chr10 17273734 17273818 -123042947 - Tigger3b DNA MER2_type -2946 82 1 224 250 12 12 chr10 17274081 17274165 -123042600 + (TA)n Simple_repeat Simple_repeat 1 84 0 2449 78 10 0 chr10 17274624 17274931 -123041834 + AluY SINE Alu 1 310 -1 2073 139 10 0 chr10 17274964 17275273 -123041492 + AluSx SINE Alu 1 312 0 205 300 108 17 chr10 17275628 17275748 -123041017 - L2 LINE L2 -799 2515 2385 2002 108 66 10 chr10 17276521 17276809 -123039956 + AluSq SINE Alu 1 304 -9 1740 139 15 0 chr10 17277343 17277609 -123039156 + Tigger5 DNA MER2_type 2052 2321 -2 7132 78 23 0 chr10 17278669 17279762 -123037003 - L1PA7 LINE L1 -7 6147 5049 4773 87 0 0 chr10 17279762 17280406 -123036359 + L1PA7 LINE L1 4419 5062 -1084 1786 177 0 16 chr10 17280659 17280969 -123035796 + AluJb SINE Alu 1 305 -7 454 196 20 10 chr10 17281469 17281571 -123035194 - L1MC4 LINE L1 -18 8024 7922 2308 119 0 0 chr10 17281690 17281993 -123034772 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr10 17282314 17282338 -123034427 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 314 307 88 76 chr10 17282338 17282748 -123034017 - L2 LINE L2 -13 3300 2886 1548 218 40 25 chr10 17282769 17283352 -123033413 + L1MEc LINE L1 2058 2606 -3609 579 158 219 0 chr10 17283370 17283484 -123033281 - FLAM_C SINE Alu -4 139 1 697 231 17 0 chr10 17283497 17283670 -123033095 + L1MEc LINE L1 2614 2789 -3426 2346 189 42 0 chr10 17284019 17284427 -123032338 - MSTB1 LTR MaLR 0 432 8 474 187 24 65 chr10 17284565 17284640 -123032125 + MER53 DNA DNA 1 71 -118 1778 107 9 0 chr10 17284640 17284873 -123031892 - AluSx SINE Alu -22 290 56 474 187 24 65 chr10 17284873 17284920 -123031845 + MER53 DNA DNA 71 118 -71 180 393 0 12 chr10 17285074 17285158 -123031607 - L3 LINE CR1 -44 1533 1451 539 364 22 29 chr10 17285842 17286158 -123030607 - L3b LINE CR1 -125 1458 1145 226 211 0 0 chr10 17287000 17287052 -123029713 + L1MC4 LINE L1 6652 6703 -1339 2371 68 0 10 chr10 17287065 17287357 -123029408 - AluY SINE Alu -22 289 1 1725 163 0 30 chr10 17287362 17287662 -123029103 - AluJo SINE Alu -21 291 1 2178 221 29 5 chr10 17287919 17288362 -123028403 + MER82 DNA MER2_type 200 653 0 233 221 147 0 chr10 17288362 17288430 -123028335 - MIR SINE MIR -111 151 74 2097 99 0 38 chr10 17288504 17288796 -123027969 + AluSg SINE Alu 14 294 -16 226 239 113 0 chr10 17289098 17289169 -123027596 + MIR SINE MIR 120 198 -64 1766 157 29 0 chr10 17289913 17290194 -123026571 + AluSx SINE Alu 3 291 -21 232 304 152 19 chr10 17290251 17290366 -123026399 + MIR SINE MIR 10 153 -109 1731 163 3 52 chr10 17290366 17290691 -123026074 + AluJo SINE Alu 1 309 -3 232 304 152 19 chr10 17290691 17290733 -123026032 + MIR SINE MIR 153 188 -74 289 207 69 0 chr10 17290854 17290912 -123025853 - L2 LINE L2 -2 3270 3209 189 0 0 0 chr10 17290936 17290957 -123025808 + (TG)n Simple_repeat Simple_repeat 2 22 0 784 189 0 0 chr10 17291205 17291327 -123025438 + FLAM_C SINE Alu 3 124 -19 208 253 58 69 chr10 17291911 17291998 -123024767 - L3b LINE CR1 -69 1514 1429 192 77 0 0 chr10 17292973 17292999 -123023766 + (TTA)n Simple_repeat Simple_repeat 2 27 0 876 129 0 0 chr10 17293005 17293121 -123023644 - FLAM_C SINE Alu -27 116 1 2169 122 16 0 chr10 17293360 17293708 -123023057 + AluSx SINE Alu 1 353 0 2032 178 53 61 chr10 17293915 17294095 -123022670 + MLT1D LTR MaLR 3 183 -322 2080 132 58 37 chr10 17294095 17294443 -123022322 + THE1A LTR MaLR 1 355 0 2032 178 53 61 chr10 17294443 17294668 -123022097 + MLT1D LTR MaLR 183 406 -99 1630 172 13 36 chr10 17294668 17294976 -123021789 - AluJo SINE Alu -11 301 1 2032 178 53 61 chr10 17294976 17295076 -123021689 + MLT1D LTR MaLR 406 505 0 1289 264 43 26 chr10 17295410 17295827 -123020938 - LTR33 LTR ERVL -84 437 14 491 111 0 14 chr10 17296100 17296172 -123020593 - THE1B LTR MaLR -2 362 292 2172 115 6 16 chr10 17296172 17296577 -123020188 + AluSg SINE Alu 1 402 0 2005 114 44 13 chr10 17296577 17296875 -123019890 - THE1B LTR MaLR -57 307 1 586 317 30 54 chr10 17298026 17298050 -123018715 + MLT1I LTR MaLR 5 28 -381 2013 129 10 7 chr10 17298050 17298344 -123018421 - AluSx SINE Alu -17 295 1 586 317 30 54 chr10 17298344 17298650 -123018115 + MLT1I LTR MaLR 28 327 -82 206 364 48 61 chr10 17298911 17298983 -123017782 + MIR SINE MIR 1 72 -190 1818 165 13 7 chr10 17298983 17299286 -123017479 + AluJo SINE Alu 1 305 -7 206 364 48 61 chr10 17299286 17299441 -123017324 + MIR SINE MIR 72 225 -37 464 157 11 45 chr10 17299624 17299713 -123017052 + MER58B DNA MER1_type 255 340 -1 318 353 39 13 chr10 17299985 17300138 -123016627 - L2 LINE L2 -4 3268 3112 285 396 28 39 chr10 17300771 17300918 -123015847 - L2 LINE L2 -362 2952 2805 2303 178 33 21 chr10 17300918 17301345 -123015420 - MSTB1 LTR MaLR 0 432 1 285 396 28 39 chr10 17301345 17301558 -123015207 - L2 LINE L2 -509 2805 2596 1420 196 6 92 chr10 17301564 17301890 -123014875 + AluJo SINE Alu 2 299 -3 247 224 10 20 chr10 17301910 17302008 -123014757 + GA-rich Low_complexity Low_complexity 1 97 0 287 259 142 14 chr10 17302108 17302329 -123014436 - MER5C DNA MER1_type -1 323 2 244 275 108 33 chr10 17302331 17302451 -123014314 - L2 LINE L2 -847 2467 2339 2177 202 77 0 chr10 17303009 17303410 -123013355 + MSTB1 LTR MaLR 1 432 0 1319 269 126 44 chr10 17303802 17304392 -123012373 - L2 LINE L2 -11 3302 2625 1623 188 0 14 chr10 17304392 17304685 -123012080 - AluJo SINE Alu -23 289 1 1319 269 126 44 chr10 17304685 17304975 -123011790 - L2 LINE L2 -688 2625 2360 207 278 37 0 chr10 17305004 17305058 -123011707 + L2 LINE L2 3228 3283 -30 1456 158 4 51 chr10 17305074 17305328 -123011437 + AluJo SINE Alu 43 284 -28 1696 178 3 17 chr10 17305905 17306197 -123010568 + AluJo SINE Alu 1 288 -24 1953 148 13 10 chr10 17307303 17307608 -123009157 + AluSx SINE Alu 1 306 -6 432 243 181 11 chr10 17307892 17308069 -123008696 - L2 LINE L2 -2 3311 3105 3348 187 43 88 chr10 17308090 17308234 -123008531 - L1 LINE L1 -2108 4038 3889 2180 66 52 7 chr10 17308234 17308521 -123008244 + AluY SINE Alu 1 300 -11 3348 187 43 88 chr10 17308521 17309083 -123007682 - L1 LINE L1 -2257 3889 3391 1671 160 34 20 chr10 17309083 17309376 -123007389 - AluJo SINE Alu -13 299 3 3348 187 43 88 chr10 17309376 17309698 -123007067 - L1 LINE L1 -2755 3391 3056 * 4621 153 109 68 chr10 17309696 17310807 -123005958 + L1MA9 LINE L1 4552 5616 -696 1377 184 59 26 chr10 17310807 17311105 -123005660 + AluJb SINE Alu 1 307 0 4621 153 109 68 chr10 17311105 17311331 -123005434 + L1MA9 LINE L1 5616 5831 -481 2281 117 3 0 chr10 17311331 17311639 -123005126 - AluSx SINE Alu -3 309 1 4621 153 109 68 chr10 17311639 17311964 -123004801 + L1MA9 LINE L1 5831 6273 -39 666 286 47 54 chr10 17311971 17312415 -123004350 - L1ME4a LINE L1 -47 6074 5634 278 299 9 37 chr10 17312440 17312547 -123004218 + MIR SINE MIR 20 123 -139 26 0 0 0 chr10 17312611 17312637 -123004128 + AT_rich Low_complexity Low_complexity 1 26 0 2306 133 25 33 chr10 17313523 17313890 -123002875 - THE1B LTR MaLR 0 364 1 281 301 141 64 chr10 17314121 17314277 -123002488 + L2 LINE L2 3105 3272 0 1778 181 3 3 chr10 17314367 17314670 -123002095 + AluJo SINE Alu 1 303 -9 2851 16 0 0 chr10 17315603 17315914 -123000851 - AluYa5 SINE Alu 0 311 1 1592 173 14 7 chr10 17316180 17316464 -123000301 - AluJo SINE Alu 0 312 27 2149 114 30 0 chr10 17316730 17317029 -122999736 - AluSq SINE Alu -5 308 1 267 314 115 26 chr10 17317089 17317245 -122999520 + MIR SINE MIR 29 198 -64 1631 193 3 10 chr10 17317479 17317774 -122998991 - AluJo SINE Alu -19 293 1 847 158 16 0 chr10 17318034 17318161 -122998604 - FLAM_C SINE Alu -4 129 1 519 250 67 0 chr10 17319393 17319573 -122997192 + L1ME LINE L1 4458 4649 -1497 * 878 229 80 53 chr10 17319569 17319743 -122997022 + L1ME LINE L1 5424 5592 -578 1642 197 71 71 chr10 17319743 17320209 -122996556 + MLT1C LTR MaLR 2 467 0 878 229 80 53 chr10 17320209 17320251 -122996514 + L1ME LINE L1 5592 5631 -539 2478 126 31 14 chr10 17320251 17320609 -122996156 + THE1B LTR MaLR 1 364 0 878 229 80 53 chr10 17320609 17320766 -122995999 + L1ME LINE L1 5631 5808 -362 198 167 0 0 chr10 17320772 17320802 -122995963 - MIR SINE MIR -24 238 209 * 623 296 72 66 chr10 17320800 17320981 -122995784 - L2 LINE L2 -99 3214 3036 1942 168 30 64 chr10 17320981 17321385 -122995380 + MLT1B LTR MaLR 1 390 0 623 296 72 66 chr10 17321385 17321691 -122995074 - L2 LINE L2 -277 3036 2722 2424 106 0 0 chr10 17321861 17322173 -122994592 + AluSx SINE Alu 1 312 0 1410 221 111 22 chr10 17322599 17322970 -122993795 + L1MC4 LINE L1 6476 6879 -1163 1896 176 0 0 chr10 17322970 17323282 -122993483 + AluJb SINE Alu 1 312 0 329 287 0 0 chr10 17323384 17323485 -122993280 + AluJb SINE Alu 202 302 0 653 202 84 22 chr10 17323528 17323706 -122993059 + L1MC4 LINE L1 6880 7068 -974 2114 114 0 4 chr10 17323921 17324202 -122992563 - AluSg SINE Alu -30 280 1 1103 232 187 27 chr10 17324202 17324432 -122992333 + L1MC4 LINE L1 7464 7656 -386 1726 155 13 43 chr10 17324432 17324736 -122992029 - AluJb SINE Alu -17 295 1 1103 232 187 27 chr10 17324736 17324880 -122991885 + L1MC4 LINE L1 7656 7898 -144 2150 217 58 26 chr10 17324935 17325160 -122991605 + L1MB5 LINE L1 5652 5868 -306 1639 140 21 92 chr10 17325160 17325496 -122991269 + AluJb SINE Alu 1 312 0 2150 217 58 26 chr10 17325496 17325792 -122990973 + L1MB5 LINE L1 5868 6174 0 2203 108 3 0 chr10 17325804 17326092 -122990673 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr10 17326095 17326125 -122990640 + AT_rich Low_complexity Low_complexity 1 30 0 2200 134 0 0 chr10 17326127 17326432 -122990333 + AluSc SINE Alu 1 305 -4 1692 300 95 13 chr10 17326458 17327081 -122989684 - L2 LINE L2 -649 2665 1992 1528 142 58 52 chr10 17327082 17327426 -122989339 + MER4A LTR ERV1 1 346 -318 599 119 222 24 chr10 17327558 17327684 -122989081 + MER4C LTR ERV1 296 446 -19 1615 269 79 61 chr10 17327761 17328012 -122988753 - L1MCc LINE L1 -3667 3274 3029 1502 216 0 7 chr10 17328012 17328309 -122988456 + AluJo SINE Alu 1 295 -17 1615 269 79 61 chr10 17328309 17328455 -122988310 - L1MCc LINE L1 -3912 3029 2887 2328 88 0 28 chr10 17328455 17328775 -122987990 - AluY SINE Alu 0 311 1 1615 269 79 61 chr10 17328775 17329613 -122987152 - L1MCc LINE L1 -4054 2887 2030 299 169 17 0 chr10 17329620 17329679 -122987086 - AluSp/q SINE Alu 0 303 244 753 208 134 7 chr10 17329734 17329883 -122986882 - AluJb SINE Alu -59 253 86 855 288 79 26 chr10 17329883 17330560 -122986205 - L1MCc LINE L1 -4906 1517 1129 4042 113 13 0 chr10 17330910 17331457 -122985308 + MER41A LTR ERV1 1 554 0 2214 73 3 98 chr10 17331997 17332185 -122984580 - AluSp SINE Alu -6 297 152 2180 136 0 0 chr10 17332185 17332495 -122984270 - AluSx SINE Alu 0 312 3 2214 73 3 98 chr10 17332495 17332634 -122984131 - AluSp SINE Alu -151 152 1 3813 113 48 2 chr10 17332834 17333375 -122983390 + MER61E LTR ERV1 1 566 -3 527 247 88 18 chr10 17333489 17333659 -122983106 + MLT1C LTR MaLR 6 187 -280 1636 149 15 15 chr10 17333662 17333924 -122982841 + AluJo SINE Alu 12 273 -39 419 123 0 14 chr10 17333934 17334007 -122982758 + (GGA)n Simple_repeat Simple_repeat 1 72 0 1271 221 14 7 chr10 17334016 17334292 -122982473 + MLT1C LTR MaLR 188 465 -2 1778 135 12 0 chr10 17334668 17334927 -122981838 + AluSx SINE Alu 7 268 -44 234 91 0 0 chr10 17334937 17334970 -122981795 + (CA)n Simple_repeat Simple_repeat 2 34 0 3191 120 5 11 chr10 17334971 17335420 -122981345 + LTR8 LTR ERV1 246 691 0 499 223 150 50 chr10 17335438 17335658 -122981107 - MIR SINE MIR -12 250 9 921 178 25 93 chr10 17336057 17336293 -122980472 + AluJo SINE Alu 1 220 -92 2083 140 0 7 chr10 17336852 17337160 -122979605 - AluJb SINE Alu -6 306 1 1918 140 7 27 chr10 17337517 17337817 -122978948 + AluSx SINE Alu 1 294 -18 1782 157 0 7 chr10 17338253 17338540 -122978225 - AluJo SINE Alu -27 285 1 799 306 92 25 chr10 17338587 17338743 -122978022 - MLT1L LTR MaLR -8 607 463 619 216 9 0 chr10 17338743 17338854 -122977911 - MER81 DNA DNA -2 112 1 799 306 92 25 chr10 17338854 17339178 -122977587 - MLT1L LTR MaLR -152 463 95 1606 134 4 4 chr10 17339200 17339432 -122977333 + AluJo SINE Alu 43 274 -38 2028 128 0 0 chr10 17342351 17342633 -122974132 + AluSx SINE Alu 18 299 -13 864 168 0 0 chr10 17342690 17342821 -122973944 - FLAM_C SINE Alu -12 131 1 785 334 102 5 chr10 17342849 17343241 -122973524 + LTR16A LTR ERVL 1 430 -20 836 138 16 0 chr10 17343530 17343653 -122973112 - FLAM_C SINE Alu -7 126 2 1952 146 7 0 chr10 17343705 17343992 -122972773 + AluSx SINE Alu 5 293 -19 29 28 0 0 chr10 17344015 17344051 -122972714 + AT_rich Low_complexity Low_complexity 1 36 0 1228 269 99 17 chr10 17344249 17344837 -122971928 + L1ME2 LINE L1 3915 4550 -1596 1108 226 54 10 chr10 17344831 17345145 -122971620 + L1ME2 LINE L1 5579 5906 -258 * 1426 196 11 8 chr10 17345145 17345411 -122971354 + AluJo SINE Alu 1 267 -45 25 0 0 0 chr10 17345415 17345440 -122971325 + AT_rich Low_complexity Low_complexity 1 25 0 480 94 0 188 chr10 17345441 17345526 -122971239 - L1PB3 LINE L1 -2 6152 6093 2197 121 0 16 chr10 17345526 17345841 -122970924 - AluSx SINE Alu -2 310 1 480 94 0 188 chr10 17345841 17345872 -122970893 - L1PB3 LINE L1 -61 6093 6058 951 215 46 15 chr10 17345909 17346170 -122970595 + L1ME2 LINE L1 5896 6164 0 673 266 135 54 chr10 17346305 17346505 -122970260 - LTR33 LTR ERVL -8 513 331 1578 173 0 55 chr10 17346505 17346812 -122969953 + AluJo SINE Alu 1 290 -22 673 266 135 54 chr10 17346812 17347077 -122969688 - LTR33 LTR ERVL -190 331 10 885 148 0 15 chr10 17347183 17347318 -122969447 - FLAM_C SINE Alu 0 133 1 1082 265 95 8 chr10 17348800 17349200 -122967565 - Zaphod DNA AcHobo -1 4030 3596 936 187 117 35 chr10 17349229 17349545 -122967220 - Zaphod DNA AcHobo -3081 950 609 1084 164 0 17 chr10 17349553 17349730 -122967035 - AluJo/FRAM SINE Alu -5 307 134 1748 158 10 3 chr10 17349730 17350021 -122966744 - AluSx SINE Alu -16 296 4 604 254 20 178 chr10 17350025 17350339 -122966426 - Zaphod DNA AcHobo -3417 614 252 2365 105 0 0 chr10 17350339 17350644 -122966121 + AluSg SINE Alu 1 305 -5 604 254 20 178 chr10 17350644 17350803 -122965962 - Zaphod DNA AcHobo -3779 252 235 2294 107 3 0 chr10 17350803 17351102 -122965663 + AluSx SINE Alu 1 300 -12 604 254 20 178 chr10 17351102 17351171 -122965594 - Zaphod DNA AcHobo -3796 235 157 635 159 0 97 chr10 17351467 17351612 -122965153 + FLAM_C SINE Alu 13 143 0 26 30 0 0 chr10 17351581 17351614 -122965151 + AT_rich Low_complexity Low_complexity 1 33 0 * 2146 119 7 0 chr10 17351632 17351927 -122964838 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 17351969 17352141 -122964624 + L1MA6 LINE L1 6131 6300 0 1784 139 13 43 chr10 17352283 17352586 -122964179 - AluJb SINE Alu -18 294 1 1686 156 46 29 chr10 17352983 17353290 -122963475 - AluJo SINE Alu 0 312 1 2095 113 3 46 chr10 17354255 17354582 -122962183 + AluSq SINE Alu 1 313 0 1613 177 7 11 chr10 17355268 17355551 -122961214 + AluJb SINE Alu 1 282 -30 2165 118 7 0 chr10 17357368 17357665 -122959100 + AluSx SINE Alu 1 299 -13 1494 178 7 36 chr10 17358806 17358948 -122957817 + AluJo SINE Alu 1 133 -179 2248 102 7 0 chr10 17358948 17359241 -122957524 + AluSx SINE Alu 1 295 -17 1494 178 7 36 chr10 17359241 17359379 -122957386 + AluJo SINE Alu 133 273 -39 197 319 43 21 chr10 17359673 17359767 -122956998 + MIR SINE MIR 31 126 -136 661 210 0 108 chr10 17359822 17359940 -122956825 + MER69A DNA AcHobo 4 94 -2432 1581 138 88 72 chr10 17359940 17360245 -122956520 - AluJb SINE Alu 0 312 3 661 210 0 108 chr10 17360245 17360321 -122956444 + MER69A DNA AcHobo 94 177 0 2115 96 6 53 chr10 17360580 17360902 -122955863 + AluSg SINE Alu 1 307 -3 1884 166 3 3 chr10 17361027 17361335 -122955430 + AluJo SINE Alu 1 308 -4 904 217 81 83 chr10 17361508 17361562 -122955203 + LOR1b LTR ERV1 66 119 -342 2522 50 0 3 chr10 17361562 17361860 -122954905 - AluY SINE Alu -14 297 1 904 217 81 83 chr10 17361860 17362202 -122954563 + LOR1b LTR ERV1 119 461 0 1249 167 194 8 chr10 17362438 17362690 -122954075 - AluJo SINE Alu -13 299 1 207 167 0 0 chr10 17362768 17362810 -122953955 + CT-rich Low_complexity Low_complexity 3 44 0 2260 119 3 0 chr10 17362850 17363160 -122953605 - AluSx SINE Alu -1 311 1 349 264 38 130 chr10 17363332 17363571 -122953194 + L3 LINE CR1 583 799 -778 2183 106 0 17 chr10 17363640 17363932 -122952833 - AluSx SINE Alu -25 287 1 419 316 176 35 chr10 17364021 17364448 -122952317 + L3 LINE CR1 1021 1507 -70 1988 122 3 14 chr10 17364600 17364944 -122951821 + AluSx SINE Alu 1 341 0 385 259 0 53 chr10 17364999 17365130 -122951635 - L2 LINE L2 -7 3306 3183 209 331 39 62 chr10 17366907 17367037 -122949728 - L2 LINE L2 -1 3312 3186 1599 173 0 19 chr10 17367073 17367375 -122949390 - AluJb SINE Alu 0 318 22 2355 110 0 0 chr10 17367402 17367711 -122949054 + AluSg SINE Alu 1 309 -1 23 0 0 0 chr10 17367761 17367784 -122948981 + AT_rich Low_complexity Low_complexity 1 23 0 1333 123 5 5 chr10 17367804 17367991 -122948774 - AluSx SINE Alu -125 187 1 2065 127 7 0 chr10 17368379 17368670 -122948095 - AluSq SINE Alu -20 293 1 213 342 0 0 chr10 17369161 17369240 -122947525 + L2 LINE L2 2900 2978 -294 255 138 31 15 chr10 17369303 17369368 -122947397 + (TAA)n Simple_repeat Simple_repeat 2 67 0 1410 227 4 4 chr10 17369370 17369648 -122947117 - AluJo SINE Alu -28 284 7 1868 196 105 47 chr10 17369716 17370181 -122946584 - MLT1D LTR MaLR -10 495 4 2099 138 0 0 chr10 17370278 17370576 -122946189 + AluSx SINE Alu 1 298 -14 192 309 0 0 chr10 17370615 17370670 -122946095 + L2 LINE L2 3240 3294 -19 1568 104 35 35 chr10 17370892 17371123 -122945642 + AluSx SINE Alu 64 294 -18 640 281 6 0 chr10 17371123 17371283 -122945482 + MER58B DNA MER1_type 181 341 0 584 173 0 10 chr10 17371324 17371428 -122945337 - U13 snRNA snRNA -1 103 1 2072 154 0 0 chr10 17371445 17371743 -122945022 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr10 17371819 17371845 -122944920 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1830 184 3 3 chr10 17372253 17372562 -122944203 + AluJb SINE Alu 1 309 -3 2453 64 0 0 chr10 17372759 17373093 -122943672 - AluY SINE Alu 0 334 1 281 292 32 52 chr10 17373215 17373369 -122943396 + MIR SINE MIR 47 197 -65 1843 137 4 14 chr10 17374446 17374723 -122942042 - AluJo SINE Alu -25 287 14 2767 156 8 35 chr10 17375069 17375167 -122941598 - MER66B LTR ERV1 0 486 387 2212 88 0 0 chr10 17375167 17375441 -122941324 - AluSg SINE Alu -18 292 19 2767 156 8 35 chr10 17375441 17375761 -122941004 - MER66B LTR ERV1 -99 387 80 1870 119 0 32 chr10 17375761 17376046 -122940719 - AluSx SINE Alu -36 276 1 2767 156 8 35 chr10 17376046 17376119 -122940646 - MER66B LTR ERV1 -406 80 7 217 360 27 9 chr10 17376153 17376264 -122940501 + MIR SINE MIR 50 162 -100 225 108 0 0 chr10 17377792 17377829 -122938936 + (TC)n Simple_repeat Simple_repeat 1 37 0 1790 160 34 0 chr10 17377908 17378201 -122938564 - AluJo SINE Alu -5 307 5 990 189 13 57 chr10 17378490 17378718 -122938047 - MER20 DNA MER1_type -1 218 1 2936 153 87 0 chr10 17378726 17379211 -122937554 + MER1A DNA MER1_type 1 527 0 1525 198 116 6 chr10 17379435 17379764 -122937001 + MLT1A1 LTR MaLR 1 365 0 343 298 43 43 chr10 17379818 17380006 -122936759 + MIR SINE MIR 20 207 -55 2044 105 7 7 chr10 17381913 17382190 -122934575 + AluSx SINE Alu 30 306 -6 225 119 0 0 chr10 17382225 17382267 -122934498 + (TC)n Simple_repeat Simple_repeat 2 43 0 222 118 0 0 chr10 17382267 17382301 -122934464 + (CA)n Simple_repeat Simple_repeat 1 34 0 536 141 0 0 chr10 17383157 17383235 -122933530 + AluS SINE Alu 2 79 -234 1006 188 12 6 chr10 17383235 17383405 -122933360 + Tigger3(Golem) DNA MER2_type 2858 3028 -1 186 191 0 0 chr10 17383585 17383632 -122933133 + A-rich Low_complexity Low_complexity 1 47 0 2237 120 0 0 chr10 17383739 17384038 -122932727 - AluSc SINE Alu -10 299 1 624 245 32 7 chr10 17384446 17384601 -122932164 - Zaphod DNA AcHobo -3407 624 466 1027 115 0 0 chr10 17384613 17384752 -122932013 - FLAM_C SINE Alu -1 142 4 886 282 55 11 chr10 17384757 17385030 -122931735 - Zaphod DNA AcHobo -3559 472 188 2170 135 0 3 chr10 17385107 17385410 -122931355 + AluSx SINE Alu 1 302 -10 684 225 0 0 chr10 17385410 17385570 -122931195 + GA-rich Low_complexity Low_complexity 1 160 0 1153 229 122 24 chr10 17385670 17386006 -122930759 - L1MC4 LINE L1 -1198 6844 6476 2172 134 0 0 chr10 17386434 17386741 -122930024 - AluSx SINE Alu -3 309 3 276 250 23 23 chr10 17387087 17387175 -122929590 - L1MC5 LINE L1 -36 7925 7838 820 152 0 0 chr10 17387479 17387604 -122929161 + FLAM_C SINE Alu 2 126 -7 565 149 190 0 chr10 17387757 17387878 -122928887 + FRAM SINE Alu 18 161 -15 1946 122 27 3 chr10 17387878 17388172 -122928593 + AluSc SINE Alu 1 301 -8 207 0 0 0 chr10 17388543 17388566 -122928199 + (A)n Simple_repeat Simple_repeat 1 23 0 348 295 16 74 chr10 17388605 17388725 -122928040 - Zaphod DNA AcHobo -3696 335 228 2162 120 3 0 chr10 17388725 17389024 -122927741 + AluSx SINE Alu 1 300 -12 348 295 16 74 chr10 17389024 17389093 -122927672 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 17389388 17389486 -122927279 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 17389504 17389537 -122927228 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 17389555 17389850 -122926915 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 17389892 17390064 -122926701 + L1MA6 LINE L1 6131 6300 0 1607 141 20 53 chr10 17390206 17390510 -122926255 - AluJb SINE Alu -18 294 1 2237 123 3 0 chr10 17391538 17391838 -122924927 + AluSx SINE Alu 1 301 -11 246 62 0 0 chr10 17391933 17391965 -122924800 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 200 329 80 59 chr10 17392193 17392430 -122924335 - L2 LINE L2 -219 3053 2812 1327 143 9 19 chr10 17393269 17393485 -122923280 - AluSg/x SINE Alu -15 297 84 207 0 0 0 chr10 17393813 17393836 -122922929 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1990 161 0 0 chr10 17393838 17394137 -122922628 - AluSx SINE Alu -13 299 1 1785 164 22 22 chr10 17394137 17394449 -122922316 - AluJo SINE Alu 0 312 1 13002 83 1 1 chr10 17394793 17396428 -122920337 - HERVL-A2 LTR ERVL -1979 3675 2041 662 87 0 39 chr10 17396472 17396575 -122920190 - AluSg/x SINE Alu -4 306 208 11001 112 5 6 chr10 17396575 17398093 -122918672 - HERVL-A2 LTR ERVL -4100 1554 39 1932 151 32 11 chr10 17398093 17398448 -122918317 - MLT2A2 LTR ERVL -149 304 1 2200 129 0 10 chr10 17398476 17398787 -122917978 + AluSx SINE Alu 2 309 -3 326 257 0 19 chr10 17398976 17399081 -122917684 + MER113 DNA MER1_type? 12 114 -407 261 139 0 0 chr10 17399243 17399286 -122917479 + (CA)n Simple_repeat Simple_repeat 2 44 0 1957 162 0 19 chr10 17399342 17399651 -122917114 - AluSx SINE Alu -9 303 1 420 219 0 0 chr10 17399667 17399795 -122916970 + CT-rich Low_complexity Low_complexity 1 128 0 2071 117 11 0 chr10 17399815 17400098 -122916667 - AluSx SINE Alu -26 286 1 788 157 0 0 chr10 17400149 17400264 -122916501 - FLAM_C SINE Alu -18 115 1 188 163 23 0 chr10 17400396 17400439 -122916326 + (TA)n Simple_repeat Simple_repeat 2 45 0 445 209 45 18 chr10 17400918 17401028 -122915737 - MIR3 SINE MIR -4 204 92 2117 124 14 3 chr10 17401342 17401632 -122915133 + AluSx SINE Alu 2 294 -18 251 108 36 60 chr10 17401825 17401908 -122914857 + (TAA)n Simple_repeat Simple_repeat 1 81 0 1909 176 0 0 chr10 17401995 17402297 -122914468 + AluJb SINE Alu 1 302 -10 1744 187 7 0 chr10 17402460 17402749 -122914016 + AluJo SINE Alu 4 294 -18 241 242 32 0 chr10 17403266 17403328 -122913437 - L2 LINE L2 0 3272 3209 1909 123 93 30 chr10 17403799 17404132 -122912633 + THE1B LTR MaLR 1 354 -10 2502 39 0 3 chr10 17404245 17404561 -122912204 - AluY SINE Alu 0 315 1 1917 140 3 32 chr10 17404649 17404957 -122911808 - AluSx SINE Alu -13 299 1 286 288 62 27 chr10 17406012 17406158 -122910607 - L1ME4a LINE L1 -14 6107 5957 1906 128 7 3 chr10 17406772 17407096 -122909669 - AluSp SINE Alu 0 325 1 192 338 13 0 chr10 17407449 17407526 -122909239 + MIR3 SINE MIR 117 194 -14 24 77 0 0 chr10 17407559 17407611 -122909154 + AT_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr10 17407718 17407753 -122909012 + AT_rich Low_complexity Low_complexity 1 35 0 1891 104 82 0 chr10 17407797 17408065 -122908700 - AluSx SINE Alu -22 290 1 202 202 0 45 chr10 17408326 17408415 -122908350 + (TTAAA)n Simple_repeat Simple_repeat 3 87 0 2245 117 0 0 chr10 17409036 17409334 -122907431 - AluSq SINE Alu -15 298 1 2293 117 0 0 chr10 17409619 17409919 -122906846 - AluSx SINE Alu -12 300 1 986 153 6 0 chr10 17410084 17410261 -122906504 + GA-rich Low_complexity Low_complexity 3 180 0 633 186 7 71 chr10 17410265 17410405 -122906360 - FLAM_C SINE Alu -2 131 1 201 143 0 0 chr10 17410460 17410495 -122906270 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 275 326 12 0 chr10 17410596 17410682 -122906083 - ERVL LTR ERVL -2560 3204 3118 1747 243 88 36 chr10 17410709 17410948 -122905817 - LTR68 LTR ERV1 -4 736 511 2256 127 0 0 chr10 17410948 17411256 -122905509 - AluSx SINE Alu -4 308 1 1747 243 88 36 chr10 17411256 17411626 -122905139 - LTR68 LTR ERV1 -229 511 1 1281 196 25 83 chr10 17411732 17412059 -122904706 - AluJb SINE Alu -4 308 1 2034 104 0 83 chr10 17412070 17412407 -122904358 - AluSx SINE Alu -3 309 1 2278 121 0 0 chr10 17412888 17413194 -122903571 - AluSx SINE Alu -6 306 1 2019 116 4 4 chr10 17413481 17413781 -122902984 - AluSx SINE Alu 0 315 16 498 171 0 45 chr10 17414227 17414315 -122902450 + MER21B LTR ERV1 1 84 -779 2127 116 0 3 chr10 17414318 17414603 -122902162 - AluSx SINE Alu -9 303 20 5333 67 4 3 chr10 17414609 17415286 -122901479 + MER4E LTR ERV1 89 766 0 2302 105 0 0 chr10 17415869 17416164 -122900601 + AluSx SINE Alu 6 300 -12 1911 151 7 0 chr10 17416179 17416458 -122900307 + AluSq SINE Alu 5 285 -28 1825 213 3 19 chr10 17416835 17417206 -122899559 - MLT1A1 LTR MaLR 0 365 1 591 219 0 8 chr10 17417275 17417394 -122899371 - FLAM_C SINE Alu -10 133 16 2005 125 4 4 chr10 17417677 17417985 -122898780 - AluSc SINE Alu 0 308 1 1862 143 3 44 chr10 17417988 17418303 -122898462 - AluJo SINE Alu -10 302 1 21 0 0 0 chr10 17419195 17419216 -122897549 + AT_rich Low_complexity Low_complexity 1 21 0 775 123 15 23 chr10 17420671 17420801 -122895964 + FLAM_C SINE Alu 4 132 -1 2215 119 7 0 chr10 17421210 17421504 -122895261 + AluSx SINE Alu 1 296 -16 1822 152 6 48 chr10 17421760 17421934 -122894831 - AluJo SINE Alu -9 303 123 188 35 35 0 chr10 17421934 17421963 -122894802 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2073 132 0 0 chr10 17421963 17422244 -122894521 - AluSx SINE Alu -31 281 1 1822 152 6 48 chr10 17422244 17422384 -122894381 - AluJo SINE Alu -187 125 1 211 278 0 42 chr10 17422720 17422792 -122893973 + MIR3 SINE MIR 138 206 -2 216 97 0 0 chr10 17423039 17423070 -122893695 + (CA)n Simple_repeat Simple_repeat 1 31 0 199 258 97 0 chr10 17423158 17423220 -122893545 - MIR SINE MIR -1 261 194 1703 158 0 7 chr10 17423228 17423500 -122893265 - AluJo SINE Alu -16 296 27 270 278 193 52 chr10 17423519 17423557 -122893208 + MIR SINE MIR 21 52 -210 2546 98 13 16 chr10 17423557 17423933 -122892832 - THE1C LTR MaLR 0 375 1 270 278 193 52 chr10 17423933 17424106 -122892659 + MIR SINE MIR 52 262 0 2183 115 3 3 chr10 17424334 17424629 -122892136 - AluSx SINE Alu -17 295 1 1644 124 9 0 chr10 17424629 17424861 -122891904 - AluSg/x SINE Alu -13 299 65 446 175 12 0 chr10 17425128 17425208 -122891557 - MLT1J LTR MaLR -359 152 72 219 304 116 9 chr10 17425271 17425383 -122891382 - MIR SINE MIR -108 154 31 34 55 0 0 chr10 17425552 17425607 -122891158 + AT_rich Low_complexity Low_complexity 1 55 0 1803 157 0 26 chr10 17425779 17426084 -122890681 - AluJb SINE Alu -15 297 1 456 165 13 0 chr10 17426590 17426669 -122890096 - MLT1J2 LTR MaLR -2 448 369 1192 131 0 0 chr10 17426691 17426859 -122889906 - AluSg/x SINE Alu -8 304 137 736 243 98 8 chr10 17426895 17427186 -122889579 - MLT1J2 LTR MaLR -103 343 20 1904 132 8 0 chr10 17427311 17427577 -122889188 + AluSx SINE Alu 14 281 -31 577 94 58 0 chr10 17427579 17427717 -122889048 + (TA)n Simple_repeat Simple_repeat 2 147 0 2049 187 80 67 chr10 17427872 17428225 -122888540 - L1MB4 LINE L1 0 6180 5814 2210 129 0 3 chr10 17428225 17428536 -122888229 - AluSq SINE Alu -3 310 1 2049 187 80 67 chr10 17428536 17428797 -122887968 - L1MB4 LINE L1 -366 5814 5558 2249 76 31 3 chr10 17428944 17429232 -122887533 + AluSc SINE Alu 1 296 -13 1720 167 3 50 chr10 17430289 17430465 -122886300 - AluSx SINE Alu -4 308 125 216 0 0 0 chr10 17430465 17430489 -122886276 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1996 123 14 0 chr10 17430489 17430642 -122886123 - AluSg1 SINE Alu -28 281 121 189 74 0 0 chr10 17430642 17430669 -122886096 + (TG)n Simple_repeat Simple_repeat 2 28 0 1996 123 14 0 chr10 17430669 17430792 -122885973 - AluSg1 SINE Alu -188 121 1 1720 167 3 50 chr10 17430792 17430937 -122885828 - AluSx SINE Alu -185 127 1 2169 125 3 0 chr10 17431201 17431496 -122885269 - AluSx SINE Alu -16 296 1 2099 116 0 10 chr10 17432072 17432383 -122884382 + AluSx SINE Alu 3 312 0 1819 144 0 4 chr10 17432712 17432982 -122883783 + AluJo SINE Alu 1 269 -43 21 0 0 0 chr10 17432988 17433009 -122883756 + AT_rich Low_complexity Low_complexity 1 21 0 2855 132 73 119 chr10 17433026 17433709 -122883056 + MER39B LTR ERV1 2 653 0 1803 97 14 42 chr10 17434697 17434985 -122881780 - AluJo SINE Alu -11 301 22 2316 94 7 0 chr10 17435369 17435666 -122881099 - AluSg SINE Alu -11 299 1 1335 154 50 93 chr10 17435672 17435952 -122880813 - AluJb SINE Alu -25 287 20 272 136 45 0 chr10 17436086 17436130 -122880635 + AluJo SINE Alu 118 163 -139 1902 116 33 7 chr10 17436143 17436419 -122880346 + AluSx SINE Alu 18 300 -12 188 208 57 0 chr10 17436682 17436735 -122880030 - L2 LINE L2 -1241 2073 2018 837 142 0 15 chr10 17437209 17437343 -122879422 - FLAM_C SINE Alu -1 132 1 1886 131 60 7 chr10 17437548 17437831 -122878934 - AluSx SINE Alu -14 298 1 192 158 0 0 chr10 17437883 17437921 -122878844 + A-rich Low_complexity Low_complexity 1 38 0 1097 248 57 19 chr10 17438039 17438357 -122878408 + MLT1I LTR MaLR 71 400 -9 818 95 26 9 chr10 17439969 17440085 -122876680 + FLAM_C SINE Alu 1 118 -25 2103 132 26 0 chr10 17440178 17440481 -122876284 + AluSx SINE Alu 1 311 -1 1977 163 89 6 chr10 17440558 17440908 -122875857 - MLT1B LTR MaLR -9 381 3 2246 92 24 0 chr10 17441479 17441773 -122874992 - AluSc SINE Alu -8 301 1 646 134 177 49 chr10 17441773 17441937 -122874828 - AluJo SINE Alu -15 297 113 841 144 0 0 chr10 17442047 17442172 -122874593 - AluJo SINE Alu -176 126 2 286 250 23 23 chr10 17442476 17442564 -122874201 + L1MC5 LINE L1 7838 7925 -36 1173 108 0 24 chr10 17442746 17442913 -122873852 + AluSg/x SINE Alu 135 297 -13 1573 128 0 28 chr10 17443668 17443918 -122872847 + AluY SINE Alu 62 304 -7 2284 93 0 16 chr10 17444101 17444411 -122872354 - AluSx SINE Alu -7 305 1 194 321 0 0 chr10 17444554 17444610 -122872155 - L3b LINE CR1 -263 1320 1265 * 197 179 26 0 chr10 17444607 17444646 -122872119 + MIR SINE MIR 118 157 -105 2592 115 3 6 chr10 17445484 17445849 -122870916 - THE1B LTR MaLR 0 364 1 2071 153 30 21 chr10 17446392 17446764 -122870001 - THE1C LTR MaLR 0 375 1 2053 138 0 0 chr10 17447062 17447351 -122869414 - AluSx SINE Alu -23 289 1 1865 163 15 18 chr10 17447792 17448123 -122868642 + MER44D DNA MER2_type 10 609 0 1928 144 38 0 chr10 17448226 17448518 -122868247 + AluSq SINE Alu 2 304 -9 2248 113 0 0 chr10 17448755 17449048 -122867717 + AluSx SINE Alu 1 293 -19 1885 159 3 19 chr10 17449388 17449697 -122867068 + AluJo SINE Alu 1 304 -8 191 328 98 29 chr10 17450119 17450293 -122866472 - L2 LINE L2 -671 2643 2458 1230 161 13 27 chr10 17450351 17450575 -122866190 - AluJo SINE Alu -91 221 1 189 94 0 0 chr10 17450576 17450608 -122866157 + (T)n Simple_repeat Simple_repeat 1 32 0 255 271 225 0 chr10 17450853 17450982 -122865783 + MIR SINE MIR 93 250 -12 2273 108 0 0 chr10 17451185 17451480 -122865285 + AluSx SINE Alu 5 299 -13 719 228 138 105 chr10 17452098 17452669 -122864096 - L1ME4a LINE L1 -3 6118 5529 21 36 0 0 chr10 17452930 17452958 -122863807 + AT_rich Low_complexity Low_complexity 1 28 0 2453 133 23 0 chr10 17453003 17453357 -122863408 + THE1B LTR MaLR 3 364 0 905 70 0 0 chr10 17454129 17454243 -122862522 + AluSg/x SINE Alu 197 310 -2 245 207 146 37 chr10 17454476 17454558 -122862207 + MIR SINE MIR 77 167 -95 1559 114 0 5 chr10 17454631 17454842 -122861923 + AluSg SINE Alu 1 210 -100 1797 194 14 20 chr10 17455242 17455301 -122861464 - MLT1A1 LTR MaLR -12 353 295 2199 113 0 3 chr10 17455301 17455602 -122861163 + AluSg SINE Alu 1 300 -10 1797 194 14 20 chr10 17455602 17455887 -122860878 - MLT1A1 LTR MaLR -70 295 11 384 280 158 67 chr10 17455891 17456367 -122860398 - MLT1H1 LTR MaLR -29 526 2 462 68 0 0 chr10 17456698 17456757 -122860008 + U2 snRNA snRNA 1 59 -129 21 0 0 0 chr10 17456772 17456793 -122859972 + AT_rich Low_complexity Low_complexity 1 21 0 2151 103 7 0 chr10 17456793 17457075 -122859690 - AluSg SINE Alu -26 284 1 251 269 65 32 chr10 17457158 17457251 -122859514 - MIR SINE MIR -114 148 53 1645 185 30 20 chr10 17457259 17457557 -122859208 - AluJb SINE Alu -10 302 2 1832 184 7 0 chr10 17457594 17457899 -122858866 - AluJo SINE Alu -5 307 1 402 21 0 0 chr10 17457954 17458001 -122858764 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 932 144 0 0 chr10 17458040 17458172 -122858593 - AluSq/x SINE Alu -180 132 1 390 251 24 9 chr10 17458291 17458401 -122858364 - MIR3 SINE MIR -40 168 56 2257 107 0 0 chr10 17459031 17459329 -122857436 - AluSq SINE Alu -15 298 1 290 122 0 0 chr10 17460642 17460683 -122856082 + MADE1 DNA Mariner 1 41 -39 564 294 87 14 chr10 17461439 17461657 -122855108 + MIR SINE MIR 2 235 -27 1762 125 10 14 chr10 17461856 17462151 -122854614 + AluSp SINE Alu 1 294 -19 227 349 33 40 chr10 17463758 17463910 -122852855 - MIR SINE MIR -55 207 57 1215 143 0 0 chr10 17465130 17465305 -122851460 - AluSp SINE Alu -11 302 128 330 167 131 24 chr10 17466016 17466100 -122850665 - MIR3 SINE MIR -52 156 64 228 220 60 0 chr10 17466683 17466733 -122850032 + L3b LINE CR1 1282 1334 -249 2888 86 11 6 chr10 17467205 17467567 -122849198 + THE1B LTR MaLR 1 364 0 1536 134 28 146 chr10 17467568 17467992 -122848773 + THE1B-int LTR MaLR 2 375 -1205 478 255 52 68 chr10 17468493 17468685 -122848080 + L2 LINE L2 3123 3311 -2 370 243 87 0 chr10 17469221 17469324 -122847441 + L1ME LINE L1 5547 5658 -463 377 318 87 11 chr10 17469622 17469899 -122846866 - HAL1b LINE L1 -659 689 392 218 297 8 51 chr10 17469900 17470018 -122846747 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 17469933 17470100 -122846665 + CT-rich Low_complexity Low_complexity 1 160 0 208 392 0 0 chr10 17470112 17470186 -122846579 + polypyrimidine Low_complexity Low_complexity 1 74 0 194 247 13 0 chr10 17470203 17470280 -122846485 + CT-rich Low_complexity Low_complexity 3 80 0 227 321 43 70 chr10 17471046 17471233 -122845532 + L2 LINE L2 3080 3261 -11 24 32 0 0 chr10 17471807 17471838 -122844927 + AT_rich Low_complexity Low_complexity 1 31 0 1254 219 38 22 chr10 17475353 17475672 -122841093 - L1MB8 LINE L1 -6 6172 5849 2001 138 6 6 chr10 17477291 17477603 -122839162 + AluSx SINE Alu 1 312 0 858 218 38 41 chr10 17477927 17478220 -122838545 + L1M4 LINE L1 4143 4434 -1712 319 300 22 67 chr10 17478862 17479042 -122837723 - L2 LINE L2 -200 3072 2901 213 226 16 16 chr10 17479994 17480056 -122836709 + C-rich Low_complexity Low_complexity 3 64 0 9847 46 0 2 chr10 17480262 17481498 -122835267 - L1P LINE L1 -2172 3974 2742 447 222 89 22 chr10 17481944 17482079 -122834686 + MER103 DNA DNA 11 154 -12 293 295 90 0 chr10 17482181 17482303 -122834462 - L3 LINE CR1 -723 854 722 385 276 6 49 chr10 17484264 17484427 -122832338 + L1M4 LINE L1 4903 5058 -1088 12663 54 7 0 chr10 17487309 17488926 -122827839 - L1P LINE L1 -3663 2483 855 357 214 36 0 chr10 17489033 17489117 -122827648 - MLT2E LTR ERVL -35 593 507 2116 129 0 20 chr10 17489158 17489460 -122827305 - AluSx SINE Alu -16 296 1 190 396 42 7 chr10 17491396 17491540 -122825225 - MIR SINE MIR -6 256 108 2249 102 0 3 chr10 17491753 17492047 -122824718 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 17492047 17492080 -122824685 + AT_rich Low_complexity Low_complexity 1 33 0 1967 133 7 20 chr10 17492530 17492830 -122823935 + AluSx SINE Alu 1 296 -16 198 0 0 0 chr10 17493275 17493297 -122823468 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 214 288 0 0 chr10 17494407 17494466 -122822299 + (TA)n Simple_repeat Simple_repeat 1 59 0 655 215 0 30 chr10 17494777 17494912 -122821853 + FLAM_A SINE Alu 1 131 -2 1101 227 102 69 chr10 17496131 17496580 -122820185 - MLT1C LTR MaLR 0 467 4 533 93 67 0 chr10 17496882 17496957 -122819808 + AluJ/FRAM SINE Alu 216 295 -17 24 0 0 0 chr10 17497543 17497567 -122819198 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr10 17497568 17497593 -122819172 + (GA)n Simple_repeat Simple_repeat 1 25 0 1573 203 0 0 chr10 17497597 17497868 -122818897 - AluJb SINE Alu -41 271 1 758 259 64 69 chr10 17497888 17498436 -122818329 - L1MEd LINE L1 -4867 1252 708 631 138 26 10 chr10 17498591 17498786 -122817979 - L1MB2 LINE L1 -1 6170 5887 330 318 96 70 chr10 17498786 17498949 -122817816 - L1MEd LINE L1 -5555 564 407 2223 167 19 3 chr10 17498949 17499309 -122817456 - MER47A DNA MER2_type 0 366 1 330 318 96 70 chr10 17499309 17499686 -122817079 - L1MEd LINE L1 -5712 407 10 272 197 0 14 chr10 17499899 17499970 -122816795 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 183 247 202 22 chr10 17501986 17502075 -122814690 - L2 LINE L2 0 3272 3168 690 148 14 84 chr10 17502390 17502532 -122814233 - FLAM_C SINE Alu -1 132 1 281 247 0 11 chr10 17502631 17502724 -122814041 + GA-rich Low_complexity Low_complexity 1 92 0 24 0 0 0 chr10 17503742 17503766 -122812999 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr10 17503931 17503974 -122812791 + AT_rich Low_complexity Low_complexity 1 43 0 2186 133 3 0 chr10 17504132 17504433 -122812332 - AluSx SINE Alu -10 302 1 200 329 80 59 chr10 17505305 17505542 -122811223 + L2 LINE L2 2812 3053 -219 246 62 0 0 chr10 17505770 17505802 -122810963 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 2237 123 3 0 chr10 17505897 17506197 -122810568 - AluSx SINE Alu -11 301 1 2095 100 13 39 chr10 17507254 17507563 -122809202 + AluSx SINE Alu 1 301 -11 334 250 34 0 chr10 17508077 17508165 -122808600 + MIR SINE MIR 104 194 -68 1724 158 0 21 chr10 17508372 17508698 -122808067 - AluJb SINE Alu 0 329 10 651 131 62 46 chr10 17508858 17508988 -122807777 - FLAM_C SINE Alu 0 143 12 1828 133 0 84 chr10 17509192 17509515 -122807250 - AluJo SINE Alu -16 296 1 1040 173 0 0 chr10 17509693 17509866 -122806899 - FRAM SINE Alu -1 175 3 2236 129 3 0 chr10 17509883 17510194 -122806571 - AluSx SINE Alu 0 312 1 516 32 0 0 chr10 17510292 17510354 -122806411 + (CA)n Simple_repeat Simple_repeat 2 63 0 309 264 11 0 chr10 17510837 17510924 -122805841 + MIR SINE MIR 167 254 -8 2363 100 0 0 chr10 17511673 17511974 -122804791 + AluSx SINE Alu 4 304 -8 198 0 0 0 chr10 17512029 17512051 -122804714 + (T)n Simple_repeat Simple_repeat 1 22 0 1009 128 0 0 chr10 17512051 17512184 -122804581 - AluSq/x SINE Alu -180 133 1 2033 115 28 7 chr10 17512196 17512357 -122804408 - AluSx SINE Alu -18 294 123 2376 112 0 3 chr10 17512357 17512669 -122804096 - AluSx SINE Alu -1 311 1 2033 115 28 7 chr10 17512669 17512795 -122803970 - AluSx SINE Alu -189 123 1 35 24 0 0 chr10 17513343 17513385 -122803380 + AT_rich Low_complexity Low_complexity 1 42 0 840 319 63 13 chr10 17513458 17513841 -122802924 + MARNA DNA Mariner 170 571 -15 190 343 121 28 chr10 17514870 17515301 -122801464 - L2 LINE L2 -1131 2183 1713 353 175 0 12 chr10 17516165 17516245 -122800520 + (TA)n Simple_repeat Simple_repeat 2 80 0 185 322 30 69 chr10 17516250 17516452 -122800313 - L2 LINE L2 -2408 906 713 21 36 0 0 chr10 17516789 17516817 -122799948 + AT_rich Low_complexity Low_complexity 1 28 0 2647 58 0 0 chr10 17517021 17517332 -122799433 - AluY SINE Alu 0 311 1 29 60 0 0 chr10 17517618 17517668 -122799097 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr10 17518833 17518855 -122797910 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 17521674 17521698 -122795067 + AT_rich Low_complexity Low_complexity 1 24 0 211 254 42 17 chr10 17522357 17522475 -122794290 + (TA)n Simple_repeat Simple_repeat 2 122 0 25 31 0 0 chr10 17527130 17527162 -122789603 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 17527916 17527946 -122788819 + AT_rich Low_complexity Low_complexity 1 30 0 214 278 35 26 chr10 17529324 17529439 -122787326 + C-rich Low_complexity Low_complexity 4 119 0 26 0 0 0 chr10 17529701 17529727 -122787038 + GC_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr10 17530292 17530344 -122786421 + GC_rich Low_complexity Low_complexity 1 52 0 27 73 0 0 chr10 17530651 17530706 -122786059 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr10 17532226 17532247 -122784518 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 644 307 69 5 chr10 17534270 17534488 -122782277 + MIR SINE MIR 29 260 -2 1897 139 6 52 chr10 17535013 17535337 -122781428 - AluSx SINE Alu -3 309 1 375 159 0 40 chr10 17537199 17537419 -122779346 + AluJo SINE Alu 1 292 -10 1488 191 10 48 chr10 17537986 17538295 -122778470 - AluJo SINE Alu -13 299 3 21 0 0 0 chr10 17539188 17539209 -122777556 + AT_rich Low_complexity Low_complexity 1 21 0 1514 185 36 45 chr10 17540887 17541195 -122775570 + AluJb SINE Alu 2 306 -6 1076 90 0 0 chr10 17541453 17541586 -122775179 + AluSq/x SINE Alu 1 133 -179 2180 132 7 0 chr10 17541589 17541932 -122774833 + AluSx SINE Alu 1 345 0 2181 99 7 3 chr10 17542285 17542578 -122774187 - AluSc SINE Alu -15 294 1 2358 109 0 0 chr10 17543567 17543878 -122772887 + AluSx SINE Alu 1 311 -1 886 189 19 61 chr10 17544157 17544328 -122772437 + MER3 DNA MER1_type 7 169 -40 2199 116 0 3 chr10 17544328 17544622 -122772143 + AluSx SINE Alu 1 293 -19 886 189 19 61 chr10 17544622 17544662 -122772103 + MER3 DNA MER1_type 169 209 0 183 208 0 38 chr10 17544689 17544742 -122772023 + L3b LINE CR1 1303 1353 -230 1710 165 84 14 chr10 17544847 17545204 -122771561 - MLT1B LTR MaLR -8 382 1 285 29 0 0 chr10 17546031 17546065 -122770700 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 722 133 106 0 chr10 17546065 17546178 -122770587 - FLAM_C SINE Alu -17 126 2 225 333 83 0 chr10 17546186 17546294 -122770471 + L2 LINE L2 3011 3127 -186 1472 166 85 30 chr10 17546296 17546591 -122770174 + MLT1B LTR MaLR 1 311 -79 203 156 44 0 chr10 17546615 17546660 -122770105 + T-rich Low_complexity Low_complexity 2 48 0 1466 135 11 135 chr10 17546827 17547096 -122769669 + MLT1B LTR MaLR 85 303 -87 1826 172 3 10 chr10 17547096 17547398 -122769367 - AluSx SINE Alu -8 304 5 1466 135 11 135 chr10 17547398 17547477 -122769288 + MLT1B LTR MaLR 303 390 0 359 274 71 0 chr10 17547517 17547630 -122769135 + L2 LINE L2 3174 3294 -19 191 313 15 0 chr10 17548020 17548087 -122768678 + L2 LINE L2 3244 3311 -2 224 177 32 0 chr10 17548607 17548669 -122768096 + A-rich Low_complexity Low_complexity 5 68 0 429 20 0 0 chr10 17549086 17549136 -122767629 + (TG)n Simple_repeat Simple_repeat 2 51 0 192 254 90 0 chr10 17549273 17549340 -122767425 - L2 LINE L2 -678 2636 2564 209 285 77 29 chr10 17549498 17549669 -122767096 - L2 LINE L2 -333 2980 2793 1002 153 44 57 chr10 17549740 17549752 -122767013 - L1MC2 LINE L1 -1 6343 6332 2113 118 7 0 chr10 17549752 17550048 -122766717 + AluSx SINE Alu 1 298 -14 1002 153 44 57 chr10 17550048 17550263 -122766502 - L1MC2 LINE L1 -12 6332 6119 1556 156 31 116 chr10 17550349 17550773 -122765992 + MLT1B LTR MaLR 1 388 -2 504 165 0 0 chr10 17550811 17550890 -122765875 + AluJ/FLAM SINE Alu 2 80 -232 1574 179 7 21 chr10 17550891 17551176 -122765589 - AluJo SINE Alu -31 281 1 1772 137 108 17 chr10 17551436 17551780 -122764985 + THE1C LTR MaLR 1 375 0 2140 111 0 27 chr10 17552691 17552988 -122763777 - AluSx SINE Alu -23 289 1 207 0 0 0 chr10 17553487 17553510 -122763255 + (A)n Simple_repeat Simple_repeat 1 23 0 2081 72 0 4 chr10 17554912 17555163 -122761602 + AluSc SINE Alu 41 290 -19 2534 155 62 0 chr10 17555387 17555788 -122760977 + MSTB LTR MaLR 1 426 0 647 287 45 20 chr10 17556060 17556262 -122760503 - MIR SINE MIR -32 230 24 180 0 0 0 chr10 17556281 17556301 -122760464 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2648 114 47 33 chr10 17556377 17556727 -122760038 + MSTA LTR MaLR 1 359 -69 2603 69 9 9 chr10 17556727 17557059 -122759706 - L1PA8 LINE L1 -2 6170 5839 2648 114 47 33 chr10 17557059 17557130 -122759635 + MSTA LTR MaLR 359 428 0 1111 216 32 5 chr10 17557131 17557349 -122759416 - MER58A DNA MER1_type 0 224 1 1480 151 76 31 chr10 17558931 17559248 -122757517 + THE1C LTR MaLR 1 331 -44 1421 179 4 0 chr10 17559248 17559482 -122757283 - AluSq SINE Alu -78 235 1 267 146 0 0 chr10 17559482 17559523 -122757242 + THE1C LTR MaLR 388 428 0 2404 110 0 0 chr10 17559953 17560261 -122756504 + AluSx SINE Alu 1 308 -4 2181 90 7 20 chr10 17560346 17560646 -122756119 - AluY SINE Alu -15 296 1 463 116 0 197 chr10 17561728 17561809 -122754956 + MER63 DNA MER1_type 601 642 -419 2152 112 21 0 chr10 17561809 17562094 -122754671 + AluSx SINE Alu 1 291 -21 463 116 0 197 chr10 17562094 17562159 -122754606 + MER63 DNA MER1_type 642 718 -343 784 229 78 23 chr10 17562450 17562668 -122754097 + MER63C DNA MER1_type 169 398 -532 2650 122 5 0 chr10 17562668 17563037 -122753728 - L1PB1 LINE L1 0 6151 5781 2042 134 0 13 chr10 17563065 17563364 -122753401 + AluSc SINE Alu 8 302 -7 980 191 0 0 chr10 17563372 17563534 -122753231 + FRAM SINE Alu 1 161 -15 366 207 99 9 chr10 17563546 17563657 -122753108 + L1MC5 LINE L1 6738 6858 -1103 765 125 0 10 chr10 17563658 17563762 -122753003 + FLAM_C SINE Alu 17 119 -24 718 130 0 7 chr10 17563762 17563891 -122752874 - L1M2 LINE L1 -386 5780 5656 2108 124 0 3 chr10 17563920 17564211 -122752554 + AluSq SINE Alu 1 290 -23 214 359 88 19 chr10 17564264 17564423 -122752342 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 17565113 17565382 -122751383 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 17565650 17565792 -122750973 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 17566431 17566554 -122750211 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 17566568 17566705 -122750060 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 17566788 17566973 -122749792 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 17566979 17567160 -122749605 + L2 LINE L2 3105 3296 -17 2144 125 0 0 chr10 17567198 17567493 -122749272 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 17567930 17567956 -122748809 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1996 140 0 34 chr10 17567958 17568280 -122748485 - AluSx SINE Alu -1 311 1 527 65 0 0 chr10 17568427 17568489 -122748276 - Alu SINE Alu -255 63 2 689 252 73 32 chr10 17569562 17569741 -122747024 + MIR SINE MIR 28 219 -43 2221 134 0 3 chr10 17569741 17570054 -122746711 + AluSx SINE Alu 1 312 0 689 252 73 32 chr10 17570054 17570092 -122746673 + MIR SINE MIR 219 254 -8 297 333 94 22 chr10 17570278 17570458 -122746307 - MIR3 SINE MIR -9 199 7 798 288 72 104 chr10 17572990 17573656 -122743109 + L1ME4a LINE L1 28 713 -5406 393 22 0 0 chr10 17573656 17573702 -122743063 + (CA)n Simple_repeat Simple_repeat 2 47 0 798 288 72 104 chr10 17573702 17574038 -122742727 + L1ME4a LINE L1 713 992 -5127 1959 152 3 7 chr10 17574038 17574340 -122742425 + AluSx SINE Alu 1 301 -11 798 288 72 104 chr10 17574340 17574482 -122742283 + L1ME4a LINE L1 992 1137 -4982 2235 222 48 54 chr10 17574510 17575028 -122741737 - LTR40a LTR ERVL -1 518 4 528 268 42 84 chr10 17575205 17576109 -122740656 + L1ME4a LINE L1 4608 5260 -869 2168 125 0 0 chr10 17576240 17576544 -122740221 - AluSx SINE Alu -8 304 1 2182 111 10 0 chr10 17576977 17577275 -122739490 - AluSx SINE Alu -11 301 1 299 316 18 6 chr10 17578541 17578712 -122738053 + L1ME4a LINE L1 5693 5865 -239 727 214 146 10 chr10 17579038 17579230 -122737535 - Tigger1 DNA MER2_type 0 2418 2201 539 182 250 20 chr10 17579197 17579345 -122737420 - Tigger1 DNA MER2_type -2236 182 1 * 310 355 138 5 chr10 17579446 17579663 -122737102 - MIR SINE MIR -4 258 13 1503 177 37 27 chr10 17579910 17580209 -122736556 - AluJo SINE Alu -10 302 1 1990 125 13 13 chr10 17580285 17580597 -122736168 - AluSx SINE Alu 0 312 1 449 346 21 30 chr10 17581478 17581712 -122735053 + MIR SINE MIR 9 240 -22 516 106 0 0 chr10 17582002 17582068 -122734697 - Alu SINE Alu -244 67 2 886 142 14 0 chr10 17582071 17582212 -122734553 - FRAM SINE Alu -14 162 20 291 257 88 26 chr10 17583857 17583970 -122732795 + MIR3 SINE MIR 41 160 -48 351 259 9 18 chr10 17584059 17584171 -122732594 + MER103 DNA DNA 55 165 -1 319 179 0 18 chr10 17584444 17584500 -122732265 + AluSc SINE Alu 40 94 -205 255 316 40 0 chr10 17585044 17585120 -122731645 - MIR SINE MIR -100 108 30 637 213 8 24 chr10 17585796 17585923 -122730842 + AluSq/x SINE Alu 6 130 -182 295 152 15 15 chr10 17588475 17588541 -122728224 + GA-rich Low_complexity Low_complexity 2 67 0 237 270 178 18 chr10 17589552 17589715 -122727050 + L2 LINE L2 3001 3189 -124 928 185 0 34 chr10 17591366 17591571 -122725194 - AluJb SINE Alu -29 283 86 276 316 53 0 chr10 17592289 17592384 -122724381 + MIR SINE MIR 40 139 -123 180 350 17 0 chr10 17592657 17592717 -122724048 - L2 LINE L2 -76 3196 3136 21 0 0 0 chr10 17595218 17595239 -122721526 + AT_rich Low_complexity Low_complexity 1 21 0 1150 212 3 62 chr10 17595620 17595926 -122720839 - AluJb SINE Alu -5 307 20 342 0 0 0 chr10 17596457 17596495 -122720270 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2213 98 3 13 chr10 17598259 17598564 -122718201 - AluY SINE Alu -9 302 1 2213 113 0 3 chr10 17598571 17598873 -122717892 - AluSq SINE Alu -12 301 1 261 139 0 0 chr10 17599431 17599474 -122717291 + (T)n Simple_repeat Simple_repeat 1 43 0 333 293 87 90 chr10 17600410 17601008 -122715757 + L1M2 LINE L1 527 1122 -5727 234 116 0 0 chr10 17601365 17601408 -122715357 + (G)n Simple_repeat Simple_repeat 1 43 0 14524 171 39 10 chr10 17601420 17606456 -122710309 - L1P5 LINE L1 -360 6507 1311 2910 110 96 32 chr10 17606458 17606957 -122709808 - L1P5 LINE L1 -5708 1155 625 1142 172 0 5 chr10 17606949 17607147 -122709618 - L1P5 LINE L1 -6663 200 4 * 837 230 36 0 chr10 17607172 17607368 -122709397 + MER63 DNA MER1_type 515 717 -343 209 294 0 43 chr10 17607395 17607487 -122709278 + L2 LINE L2 3190 3277 -36 181 319 118 7 chr10 17607861 17608005 -122708760 + L2 LINE L2 3003 3162 -151 302 247 103 55 chr10 17608021 17608167 -122708598 + L2 LINE L2 3113 3265 -48 301 266 106 0 chr10 17608188 17608282 -122708483 - L2 LINE L2 -19 3294 3191 2589 118 25 35 chr10 17608610 17608999 -122707766 + MSTA LTR MaLR 1 387 -41 1716 174 3 23 chr10 17608999 17609303 -122707462 - AluSg SINE Alu -12 298 1 2589 118 25 35 chr10 17609303 17609345 -122707420 + MSTA LTR MaLR 387 428 0 891 75 42 0 chr10 17609355 17609475 -122707290 - MER75 DNA T2_type 0 514 390 735 134 89 0 chr10 17609483 17609595 -122707170 + AluSq/x SINE Alu 5 126 -187 2332 92 0 3 chr10 17609598 17609893 -122706872 + AluSc SINE Alu 3 296 -13 2673 130 8 0 chr10 17609895 17610280 -122706485 - MER75 DNA T2_type -126 388 1 258 300 86 7 chr10 17610324 17610464 -122706301 + HAL1b LINE L1 506 656 -692 960 126 0 0 chr10 17610512 17610647 -122706118 + AluJb SINE Alu 1 135 -177 757 259 30 22 chr10 17610648 17610918 -122705847 + HAL1b LINE L1 663 934 -414 * 775 183 46 11 chr10 17610917 17611092 -122705673 - L1M4 LINE L1 -833 5313 5133 1099 235 34 47 chr10 17611105 17611492 -122705273 + L1ME1 LINE L1 5724 6105 -61 373 286 25 12 chr10 17611399 17611560 -122705205 + L1MA10 LINE L1 6169 6331 -3 * 2169 108 20 7 chr10 17611608 17611913 -122704852 - AluSq SINE Alu -4 309 1 751 150 17 0 chr10 17612264 17612384 -122704381 - AluSq/x SINE Alu -183 130 9 480 73 0 0 chr10 17612392 17612460 -122704305 - AluJo SINE Alu -4 308 241 906 183 17 51 chr10 17612461 17612636 -122704129 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17612652 17612798 -122703967 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17613623 17613655 -122703110 + (GA)n Simple_repeat Simple_repeat 2 33 0 394 279 13 3 chr10 17613774 17614082 -122702683 + GA-rich Low_complexity Low_complexity 1 311 0 814 231 138 42 chr10 17614659 17614755 -122702010 + L1ME1 LINE L1 5146 5231 -935 1892 142 0 77 chr10 17614755 17615093 -122701672 - AluSx SINE Alu 0 312 1 814 231 138 42 chr10 17615093 17615434 -122701331 + L1ME1 LINE L1 5231 5617 -549 1851 184 15 26 chr10 17615442 17615598 -122701167 + MER1B DNA MER1_type 1 157 -2555 1895 114 0 18 chr10 17615598 17615870 -122700895 - AluSq SINE Alu 0 313 47 1851 184 15 26 chr10 17615870 17616056 -122700709 + MER1B DNA MER1_type 157 339 0 1611 241 71 31 chr10 17616056 17616579 -122700186 + L1ME1 LINE L1 5619 6162 -4 2072 123 27 0 chr10 17617485 17617786 -122698979 - AluSg SINE Alu -1 309 1 511 287 0 24 chr10 17618094 17618258 -122698507 - MIR SINE MIR -74 188 29 2029 115 31 0 chr10 17618398 17618719 -122698046 + L1MA2 LINE L1 5963 6293 -11 1159 102 0 0 chr10 17618961 17619118 -122697647 + AluSg/x SINE Alu 152 308 -2 326 274 134 24 chr10 17619186 17619522 -122697243 + L1MC4 LINE L1 5591 5963 -1845 1623 175 14 27 chr10 17619692 17619984 -122696781 + AluJb SINE Alu 1 288 -24 2078 125 4 0 chr10 17620011 17620313 -122696452 + AluSx SINE Alu 1 303 0 961 146 6 6 chr10 17620396 17620554 -122696211 - L1PB3 LINE L1 -1 6153 5996 289 255 71 21 chr10 17620569 17620710 -122696055 + L1ME4a LINE L1 5969 6116 -5 545 280 77 6 chr10 17620957 17621125 -122695640 - MLT1L LTR MaLR -5 610 431 1143 101 0 6 chr10 17621669 17621828 -122694937 + AluSg/x SINE Alu 154 311 -1 913 248 102 8 chr10 17622711 17622965 -122693800 - MLT1L LTR MaLR 0 615 338 211 281 73 12 chr10 17622978 17623060 -122693705 + MIR SINE MIR 176 262 0 1397 172 33 127 chr10 17623105 17623137 -122693628 - MLT1B LTR MaLR 0 390 357 2240 115 81 0 chr10 17623137 17623484 -122693281 + THE1C LTR MaLR 1 375 0 1397 172 33 127 chr10 17623484 17623876 -122692889 - MLT1B LTR MaLR -33 357 6 255 247 12 0 chr10 17627004 17627085 -122689680 + L1MC4 LINE L1 6622 6703 -1339 897 185 0 0 chr10 17627112 17627269 -122689496 + AluJb SINE Alu 152 308 -4 318 301 23 74 chr10 17627355 17627531 -122689234 + MIR3 SINE MIR 39 205 -3 233 241 46 11 chr10 17628307 17628394 -122688371 + L2 LINE L2 2667 2756 -558 367 267 17 33 chr10 17628410 17628530 -122688235 + L2 LINE L2 3195 3312 -1 285 304 118 72 chr10 17628555 17628920 -122687845 + L2 LINE L2 2851 3240 -73 2699 100 68 0 chr10 17628920 17629331 -122687434 + L1PA13 LINE L1 5725 6163 0 285 304 118 72 chr10 17629331 17629396 -122687369 + L2 LINE L2 3240 3301 -12 2134 115 0 3 chr10 17629413 17629699 -122687066 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17629700 17629745 -122687020 + (TG)n Simple_repeat Simple_repeat 2 46 0 1847 167 0 0 chr10 17630391 17630690 -122686075 - AluSx SINE Alu -13 299 1 1241 230 71 40 chr10 17630951 17631404 -122685361 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17631513 17631654 -122685111 - AluJo SINE Alu 0 312 172 983 135 5 125 chr10 17631865 17631939 -122684826 - AluJo SINE Alu -136 176 95 2069 133 0 13 chr10 17631939 17632247 -122684518 + AluSx SINE Alu 9 312 0 983 135 5 125 chr10 17632247 17632372 -122684393 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17633286 17633349 -122683416 + CT-rich Low_complexity Low_complexity 4 65 0 1473 189 40 17 chr10 17633350 17633651 -122683114 - AluJb SINE Alu -4 308 1 281 241 58 11 chr10 17634200 17634287 -122682478 + MIR SINE MIR 58 148 -114 339 263 0 12 chr10 17635092 17635172 -122681593 - L2 LINE L2 -8 3305 3227 803 212 13 93 chr10 17635173 17635290 -122681475 - MER58A DNA MER1_type -2202 218 128 1891 173 0 19 chr10 17635290 17635426 -122681339 + AluSx SINE Alu 1 138 -174 2530 53 30 0 chr10 17635426 17635728 -122681037 + AluY SINE Alu 1 311 0 1891 173 0 19 chr10 17635728 17635909 -122680856 + AluSx SINE Alu 138 312 0 803 212 13 93 chr10 17635909 17636027 -122680738 - MER58A DNA MER1_type -2292 128 2 292 356 69 5 chr10 17636053 17636241 -122680524 - L2 LINE L2 -203 3110 2911 370 325 81 27 chr10 17636257 17636555 -122680210 - L2 LINE L2 -517 2797 2484 2265 88 3 14 chr10 17637393 17637690 -122679075 + AluSx SINE Alu 1 294 -18 534 284 104 67 chr10 17637904 17638180 -122678585 - L1ME4a LINE L1 -4 6117 5853 2032 125 3 7 chr10 17638180 17638475 -122678290 - AluSx SINE Alu -18 294 1 534 284 104 67 chr10 17638475 17638782 -122677983 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17641675 17641843 -122674922 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17641843 17641872 -122674893 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17641876 17642053 -122674712 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17642053 17642342 -122674423 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17642356 17642476 -122674289 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17642985 17643244 -122673521 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17643443 17643558 -122673207 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17643998 17644278 -122672487 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17644676 17644809 -122671956 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17645329 17645520 -122671245 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17645520 17645833 -122670932 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17645833 17646099 -122670666 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17646427 17646518 -122670247 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17647818 17648125 -122668640 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17649590 17649675 -122667090 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17651878 17651963 -122664802 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17652027 17652346 -122664419 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17652529 17652642 -122664123 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17653067 17653296 -122663469 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17653546 17653576 -122663189 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17653579 17653692 -122663073 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17654247 17654640 -122662125 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17655138 17655394 -122661371 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17655489 17655624 -122661141 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17656118 17656411 -122660354 - AluJo SINE Alu -26 286 1 885 161 44 0 chr10 17657184 17657364 -122659401 - MER33 DNA MER1_type -1 362 175 454 239 9 15 chr10 17657416 17657551 -122659214 - MER33 DNA MER1_type -251 73 1 2193 149 2 11 chr10 17657669 17658113 -122658652 + MER1A DNA MER1_type 4 529 0 466 224 100 65 chr10 17659195 17659365 -122657400 + MIR SINE MIR 73 248 -14 1801 163 66 37 chr10 17661524 17661921 -122654844 + L1MA2 LINE L1 5897 6304 0 22082 105 22 6 chr10 17662122 17666267 -122650498 + L1PA8 LINE L1 1960 6169 -3 332 301 7 27 chr10 17667390 17667536 -122649229 + MIR SINE MIR 79 221 -41 2404 64 0 0 chr10 17667841 17668122 -122648643 + AluY SINE Alu 15 295 -16 774 187 120 72 chr10 17668364 17668573 -122648192 + MER20 DNA MER1_type 1 219 0 2948 90 0 6 chr10 17668764 17669130 -122647635 - THE1B LTR MaLR 0 364 1 865 123 0 0 chr10 17669262 17669384 -122647381 + L1MA1 LINE L1 6181 6302 0 4782 135 29 8 chr10 17670289 17671072 -122645693 - L1PA16 LINE L1 0 6166 5367 295 233 123 0 chr10 17672876 17672949 -122643816 - MER94 DNA DNA -52 82 1 1746 175 3 22 chr10 17673300 17673614 -122643151 - AluJb SINE Alu -4 308 1 545 170 226 0 chr10 17673620 17673726 -122643039 - FLAM_C SINE Alu -10 133 4 442 280 54 42 chr10 17673827 17673995 -122642770 + MIR SINE MIR 3 172 -90 1488 297 91 10 chr10 17674015 17674698 -122642067 + MER20B DNA MER1_type 42 779 -4 2212 105 6 16 chr10 17674735 17675049 -122641716 + AluSq SINE Alu 1 311 -2 597 222 148 0 chr10 17676386 17676548 -122640217 - MER5A DNA MER1_type 0 189 4 855 130 7 22 chr10 17677333 17677471 -122639294 - FLAM_C SINE Alu -7 136 1 1606 172 26 30 chr10 17679920 17680223 -122636542 + AluJb SINE Alu 1 302 -10 876 211 22 0 chr10 17680286 17680471 -122636294 - MER20 DNA MER1_type -1 218 30 450 298 35 7 chr10 17680870 17681011 -122635754 + L3 LINE CR1 1425 1569 -8 303 269 87 0 chr10 17681965 17682069 -122634696 - MIR3 SINE MIR -7 201 89 764 222 148 14 chr10 17682231 17682447 -122634318 + L1ME LINE L1 5559 5803 -361 2897 289 125 21 chr10 17682555 17683967 -122632798 + L2 LINE L2 1277 2834 -480 451 267 337 0 chr10 17683996 17684284 -122632481 + L2 LINE L2 2929 3313 0 263 293 12 0 chr10 17685436 17685518 -122631247 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17687379 17687434 -122629331 + polypurine Low_complexity Low_complexity 4 56 0 428 315 210 6 chr10 17687606 17687949 -122628816 + L2 LINE L2 2562 2974 -340 1105 101 13 0 chr10 17688291 17688440 -122628325 + L1PA10 LINE L1 6018 6168 0 1520 117 0 14 chr10 17688558 17688780 -122627985 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17690711 17690735 -122626030 + AT_rich Low_complexity Low_complexity 1 24 0 412 215 6 153 chr10 17690893 17691056 -122625709 + MIR SINE MIR 66 204 -58 1572 139 9 104 chr10 17691101 17691417 -122625348 - MER2 DNA MER2_type -58 287 2 449 346 21 30 chr10 17691676 17691910 -122624855 - MIR SINE MIR -22 240 9 2216 101 7 0 chr10 17692791 17693088 -122623677 + AluSx SINE Alu 1 299 -13 253 273 23 0 chr10 17693136 17693224 -122623541 + L1MC4 LINE L1 6614 6703 -1339 323 311 0 0 chr10 17693232 17693322 -122623443 + L1MC4 LINE L1 6614 6703 -1339 276 30 0 0 chr10 17693326 17693359 -122623406 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 132 22 15 chr10 17694028 17694117 -122622648 + L1P1 LINE L1 5374 5466 -689 1935 175 28 50 chr10 17694131 17694245 -122622520 + L1MB8 LINE L1 5419 5534 -644 2083 113 17 3 chr10 17694245 17694536 -122622229 - AluSc SINE Alu -14 295 1 1935 175 28 50 chr10 17694536 17694843 -122621922 + L1MB8 LINE L1 5534 5831 -347 1347 165 26 11 chr10 17694844 17695117 -122621648 + L1MB8 LINE L1 5902 6178 0 1651 173 0 53 chr10 17695206 17695529 -122621236 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17696041 17696079 -122620686 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2396 82 0 7 chr10 17697841 17698145 -122618620 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17699657 17699677 -122617088 + (A)n Simple_repeat Simple_repeat 1 20 0 474 186 132 23 chr10 17699729 17699816 -122616949 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17699816 17699840 -122616925 + (CA)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17699840 17699881 -122616884 + L1ME2 LINE L1 6129 6164 0 1810 162 17 3 chr10 17699947 17700243 -122616522 - AluJb SINE Alu -12 300 1 266 290 90 10 chr10 17700505 17700605 -122616160 - MIR SINE MIR -102 160 53 2095 133 0 0 chr10 17701265 17701559 -122615206 - AluSq SINE Alu -11 302 9 2368 66 0 40 chr10 17701652 17701954 -122614811 + AluY SINE Alu 1 290 -21 1947 235 24 49 chr10 17701956 17702551 -122614214 + L1ME1 LINE L1 5597 6334 0 326 292 11 0 chr10 17702559 17702648 -122614117 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17704035 17704057 -122612708 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17704116 17704362 -122612403 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17704407 17704693 -122612072 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17704693 17704866 -122611899 + AluSg/x SINE Alu 132 310 0 267 261 54 9 chr10 17705473 17705584 -122611181 + L1MC3 LINE L1 6708 6823 -962 1173 167 50 14 chr10 17705795 17705807 -122610958 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17705807 17706187 -122610578 - THE1B LTR MaLR 0 364 1 1173 167 50 14 chr10 17706187 17706395 -122610370 - MER46A DNA MER2_type -2505 226 8 454 188 101 54 chr10 17706276 17706425 -122610340 + MER46A DNA MER2_type 11 166 -70 * 1318 111 6 0 chr10 17706678 17706858 -122609907 + AluSp SINE Alu 125 305 -8 2205 123 3 0 chr10 17707417 17707718 -122609047 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17707775 17707826 -122608939 + L2 LINE L2 3217 3272 0 1718 154 32 4 chr10 17708293 17708572 -122608193 - AluJo SINE Alu -25 287 1 2628 43 0 3 chr10 17708911 17709216 -122607549 - AluY SINE Alu -7 304 1 306 291 75 8 chr10 17709334 17709468 -122607297 + MIR SINE MIR 112 254 -8 704 248 78 59 chr10 17709663 17710109 -122606656 + MLT1E LTR MaLR 2 537 -30 226 245 21 64 chr10 17710206 17710300 -122606465 + MIR SINE MIR 118 207 -55 2188 118 30 3 chr10 17710384 17710688 -122606077 - AluSx SINE Alu 0 312 1 361 304 63 47 chr10 17710697 17711059 -122605706 + L1ME2 LINE L1 5585 5952 -212 238 219 86 29 chr10 17711399 17711504 -122605261 + L1ME LINE L1 5643 5753 -368 357 244 98 12 chr10 17711690 17711854 -122604911 + AluJb SINE Alu 105 282 -20 354 280 105 41 chr10 17711954 17712365 -122604400 - L2 LINE L2 -1022 2292 1856 31 0 0 0 chr10 17713480 17713511 -122603254 + AT_rich Low_complexity Low_complexity 1 31 0 2256 93 0 35 chr10 17713717 17714027 -122602738 - AluSq SINE Alu -14 299 1 2292 103 0 0 chr10 17714657 17714949 -122601816 + AluSc SINE Alu 1 292 -17 855 201 5 0 chr10 17716257 17716645 -122600120 + CT-rich Low_complexity Low_complexity 1 390 0 2118 141 0 0 chr10 17717558 17717849 -122598916 + AluSx SINE Alu 6 296 -16 237 287 50 0 chr10 17718347 17718448 -122598317 + MIR SINE MIR 38 143 -119 25 31 0 0 chr10 17718712 17718744 -122598021 + AT_rich Low_complexity Low_complexity 1 32 0 202 338 38 45 chr10 17719009 17719142 -122597623 - L2 LINE L2 -604 2710 2579 216 344 33 17 chr10 17719288 17719468 -122597297 - L2 LINE L2 -899 2415 2233 541 154 0 0 chr10 17719593 17719671 -122597094 - AluJ/FLAM SINE Alu -233 79 2 2995 151 0 8 chr10 17720427 17720911 -122595854 - L1PA15 LINE L1 -3 6162 5683 346 294 108 5 chr10 17721018 17721212 -122595553 - MIR SINE MIR -1 261 48 1618 83 208 0 chr10 17721377 17721618 -122595147 - AluSg1 SINE Alu -18 291 1 2676 140 4 42 chr10 17721620 17722071 -122594694 + Tigger2a DNA MER2_type 1 434 0 2393 104 0 0 chr10 17722569 17722877 -122593888 - AluSc SINE Alu -1 308 1 1669 184 3 10 chr10 17722911 17723210 -122593555 - AluJb SINE Alu -5 307 11 520 258 65 70 chr10 17723220 17723937 -122592828 - L1MEd LINE L1 -4325 2216 1229 4233 176 70 4 chr10 17724094 17724867 -122591898 + LTR1B LTR ERV1 1 824 -2 9375 91 5 2 chr10 17725724 17727800 -122588965 + L1PA7 LINE L1 4073 6152 -2 1267 185 163 135 chr10 17728024 17728132 -122588633 + LTR1B LTR ERV1 82 186 -640 369 0 0 0 chr10 17728132 17728173 -122588592 + (CA)n Simple_repeat Simple_repeat 2 42 0 1267 185 163 135 chr10 17728173 17728789 -122587976 + LTR1B LTR ERV1 186 826 0 341 265 110 68 chr10 17729023 17729242 -122587523 + MLT1L LTR MaLR 214 441 -174 26 0 0 0 chr10 17729851 17729877 -122586888 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr10 17730232 17730259 -122586506 + (TG)n Simple_repeat Simple_repeat 2 28 0 695 289 24 0 chr10 17730351 17730559 -122586206 + MIR SINE MIR 46 258 -4 3825 165 106 13 chr10 17732009 17732765 -122584000 + LTR1B LTR ERV1 1 826 0 292 318 27 27 chr10 17735248 17735396 -122581369 + MIR SINE MIR 45 192 -70 533 226 24 8 chr10 17735474 17735598 -122581167 - L2 LINE L2 -1 3312 3187 261 182 31 75 chr10 17735737 17735971 -122580794 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 238 250 48 12 chr10 17735901 17736069 -122580696 + (TA)n Simple_repeat Simple_repeat 2 175 0 * 276 350 102 0 chr10 17737707 17737893 -122578872 - MIR SINE MIR -54 208 4 186 43 0 0 chr10 17738083 17738106 -122578659 + (T)n Simple_repeat Simple_repeat 1 23 0 5712 51 0 0 chr10 17738174 17738862 -122577903 + L1PA5 LINE L1 5467 6154 0 1032 81 0 22 chr10 17740127 17740263 -122576502 - AluSq/x SINE Alu -180 133 1 493 59 0 2 chr10 17740505 17740568 -122576197 + L1PA4 LINE L1 6057 6135 -28 2148 135 0 3 chr10 17741266 17741569 -122575196 + AluSx SINE Alu 1 302 -10 182 329 155 12 chr10 17741781 17741942 -122574823 + MIR SINE MIR 76 259 -3 796 143 30 30 chr10 17741955 17742088 -122574677 - FLAM_C SINE Alu 0 133 1 21 36 0 0 chr10 17742277 17742305 -122574460 + AT_rich Low_complexity Low_complexity 1 28 0 220 292 65 38 chr10 17742308 17742472 -122574293 - MIR SINE MIR -61 201 34 2235 108 0 3 chr10 17743614 17743910 -122572855 + AluSc SINE Alu 1 295 -14 1727 214 55 9 chr10 17744612 17745051 -122571714 + MLT1C LTR MaLR 6 464 -3 276 326 21 57 chr10 17747185 17747326 -122569439 + MIR SINE MIR 48 183 -79 4936 95 1 36 chr10 17747336 17748049 -122568716 - LTR12 LTR ERV1 0 688 1 329 348 59 24 chr10 17750792 17751131 -122565634 + L2 LINE L2 2185 2535 -779 1943 134 39 0 chr10 17751135 17751418 -122565347 - AluSg SINE Alu -16 294 1 797 205 62 22 chr10 17751701 17751925 -122564840 - MER106A DNA MER1_type -1 235 3 296 359 16 47 chr10 17751953 17752145 -122564620 + L2 LINE L2 2914 3099 -173 2170 132 35 51 chr10 17752236 17752631 -122564134 + MLT1B LTR MaLR 1 389 -1 1593 196 18 0 chr10 17754340 17754621 -122562144 + AluJb SINE Alu 7 292 -20 298 0 48 0 chr10 17754692 17754734 -122562031 + (TG)n Simple_repeat Simple_repeat 2 45 0 257 0 30 0 chr10 17754796 17754829 -122561936 + (TG)n Simple_repeat Simple_repeat 2 35 0 333 0 0 0 chr10 17754890 17754927 -122561838 + (TG)n Simple_repeat Simple_repeat 1 37 0 545 305 47 60 chr10 17755009 17755389 -122561376 + L2 LINE L2 2898 3272 0 562 262 12 24 chr10 17756069 17756237 -122560528 + MER5B DNA MER1_type 8 173 -5 423 193 23 0 chr10 17756462 17756550 -122560215 + MER5A DNA MER1_type 4 93 -96 1652 201 7 0 chr10 17756821 17757129 -122559636 + AluJo SINE Alu 1 310 0 5531 70 113 0 chr10 17757650 17758392 -122558373 - LTR12 LTR ERV1 0 826 1 4733 93 1 15 chr10 17758392 17759045 -122557720 - HERV9 LTR ERV1 0 8399 7756 2118 177 91 77 chr10 17759039 17759964 -122556801 - Harlequin LTR ERV1 -5176 1720 842 * 35684 89 29 6 chr10 17759933 17764737 -122552028 - Harlequin LTR ERV1 -3425 4974 58 4978 68 224 0 chr10 17764761 17765436 -122551329 - LTR12 LTR ERV1 0 826 1 931 180 87 0 chr10 17765436 17765608 -122551157 - MER5A DNA MER1_type -2 187 1 939 92 0 0 chr10 17766825 17766945 -122549820 - L1MA2 LINE L1 0 6304 6185 304 269 81 94 chr10 17766958 17767192 -122549573 - L1ME4a LINE L1 -22 6099 5869 515 300 78 40 chr10 17767322 17767669 -122549096 - L1ME4a LINE L1 -460 5661 5302 182 261 60 97 chr10 17767802 17767936 -122548829 + L2 LINE L2 1398 1526 -1788 293 143 0 0 chr10 17769323 17769365 -122547400 + LTR7 LTR ERV1 1 42 -408 1899 151 6 22 chr10 17770954 17771266 -122545499 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17771822 17772030 -122544735 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17772811 17773115 -122543650 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17773645 17773953 -122542812 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17774318 17774366 -122542399 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17774366 17774463 -122542302 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17774463 17774480 -122542285 + AT_rich Low_complexity Low_complexity 46 62 0 360 0 0 0 chr10 17774687 17774727 -122542038 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2122 132 0 0 chr10 17774903 17775214 -122541551 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17776438 17776824 -122539941 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17776876 17777015 -122539750 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17777100 17777405 -122539360 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17777786 17777970 -122538795 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17778753 17778881 -122537884 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17779345 17779718 -122537047 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17781004 17781140 -122535625 - MER5B DNA MER1_type -36 153 4 229 210 120 40 chr10 17781468 17781568 -122535197 - L1M4 LINE L1 -917 5229 5122 2208 126 0 0 chr10 17782360 17782662 -122534103 + AluSq SINE Alu 1 302 -11 266 290 90 10 chr10 17783322 17783422 -122533343 + MIR SINE MIR 53 160 -102 1810 162 17 3 chr10 17783684 17783980 -122532785 + AluJb SINE Alu 1 300 -12 474 186 132 23 chr10 17784046 17784087 -122532678 - L1ME2 LINE L1 0 6164 6129 183 42 0 0 chr10 17784087 17784111 -122532654 + (TG)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17784111 17784198 -122532567 - L1ME2 LINE L1 -35 6129 6022 180 0 0 0 chr10 17784250 17784270 -122532495 + (T)n Simple_repeat Simple_repeat 1 20 0 2396 82 0 7 chr10 17785782 17786086 -122530679 + AluY SINE Alu 1 302 -9 342 0 0 0 chr10 17787848 17787886 -122528879 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 1651 173 0 53 chr10 17788398 17788721 -122528044 + AluJo SINE Alu 2 307 -5 1347 165 26 11 chr10 17788810 17789083 -122527682 - L1MB8 LINE L1 0 6178 5902 1935 175 28 50 chr10 17789084 17789391 -122527374 - L1MB8 LINE L1 -347 5831 5534 2083 113 17 3 chr10 17789391 17789682 -122527083 + AluSc SINE Alu 1 295 -14 1935 175 28 50 chr10 17789682 17789796 -122526969 - L1MB8 LINE L1 -644 5534 5419 418 132 22 15 chr10 17789810 17789899 -122526866 - L1P1 LINE L1 -689 5466 5374 372 159 0 0 chr10 17790565 17790571 -122526194 + (TA)n Simple_repeat Simple_repeat 1 6 -63 267 31 0 0 chr10 17790571 17790603 -122526162 + (TG)n Simple_repeat Simple_repeat 1 32 0 372 159 0 0 chr10 17790603 17790665 -122526100 + (TA)n Simple_repeat Simple_repeat 5 69 0 229 300 0 0 chr10 17790665 17790755 -122526010 - L1MC4 LINE L1 -1339 6703 6614 206 140 0 60 chr10 17790768 17790818 -122525947 + (TA)n Simple_repeat Simple_repeat 1 47 0 2181 101 7 3 chr10 17790848 17791146 -122525619 - AluSx SINE Alu -13 299 1 449 346 21 30 chr10 17792027 17792261 -122524504 + MIR SINE MIR 9 240 -22 1572 139 9 104 chr10 17792520 17792836 -122523929 + MER2 DNA MER2_type 2 287 -58 412 215 6 153 chr10 17792881 17793044 -122523721 - MIR SINE MIR -58 204 66 24 0 0 0 chr10 17793202 17793226 -122523539 + AT_rich Low_complexity Low_complexity 1 24 0 1520 117 0 14 chr10 17795157 17795379 -122521386 - AluSg/x SINE Alu -8 302 84 1105 101 13 0 chr10 17795497 17795646 -122521119 - L1PA10 LINE L1 0 6168 6018 428 315 210 6 chr10 17795988 17796331 -122520434 - L2 LINE L2 -340 2974 2562 260 218 0 36 chr10 17796503 17796558 -122520207 + polypyrimidine Low_complexity Low_complexity 4 56 0 263 293 12 0 chr10 17798419 17798501 -122518264 + MER103 DNA DNA 83 165 -1 451 267 337 0 chr10 17799653 17799941 -122516824 - L2 LINE L2 0 3313 2929 2897 289 125 21 chr10 17799970 17801382 -122515383 - L2 LINE L2 -480 2834 1277 764 222 148 14 chr10 17801490 17801706 -122515059 - L1ME LINE L1 -361 5803 5559 303 269 87 0 chr10 17801868 17801972 -122514793 + MIR3 SINE MIR 89 201 -7 450 298 35 7 chr10 17802926 17803067 -122513698 - L3 LINE CR1 -8 1569 1425 876 211 22 0 chr10 17803465 17803650 -122513115 + MER20 DNA MER1_type 30 218 -1 1606 172 26 30 chr10 17803713 17804016 -122512749 - AluJb SINE Alu -10 302 1 855 130 7 22 chr10 17806465 17806603 -122510162 + FLAM_C SINE Alu 1 136 -7 597 222 148 0 chr10 17807388 17807550 -122509215 + MER5A DNA MER1_type 4 189 0 2212 105 6 16 chr10 17808887 17809201 -122507564 - AluSq SINE Alu -2 311 1 1488 297 91 10 chr10 17809238 17809921 -122506844 - MER20B DNA MER1_type -4 779 42 442 280 54 42 chr10 17809941 17810109 -122506656 - MIR SINE MIR -90 172 3 545 170 226 0 chr10 17810210 17810316 -122506449 + FLAM_C SINE Alu 4 133 -10 1746 175 3 22 chr10 17810322 17810636 -122506129 + AluJb SINE Alu 1 308 -4 295 233 123 0 chr10 17810987 17811060 -122505705 + MER94 DNA DNA 1 82 -52 4782 135 29 8 chr10 17812864 17813647 -122503118 + L1PA16 LINE L1 5367 6166 0 865 123 0 0 chr10 17814553 17814675 -122502090 - L1MA1 LINE L1 0 6302 6181 2948 90 0 6 chr10 17814807 17815173 -122501592 + THE1B LTR MaLR 1 364 0 774 187 120 72 chr10 17815364 17815573 -122501192 - MER20 DNA MER1_type 0 219 1 2320 71 0 3 chr10 17815815 17816097 -122500668 - AluY SINE Alu -16 295 15 332 301 7 27 chr10 17816404 17816550 -122500215 - MIR SINE MIR -41 221 79 15818 103 31 16 chr10 17817673 17820849 -122495916 - L1PA8 LINE L1 -5 6167 2958 527 65 0 0 chr10 17821880 17821942 -122494823 + Alu SINE Alu 2 63 -255 1997 140 0 34 chr10 17822089 17822439 -122494326 + AluSx SINE Alu 1 339 0 2144 125 0 0 chr10 17822876 17823171 -122493594 - AluSx SINE Alu -17 295 1 215 287 111 50 chr10 17823209 17823390 -122493375 - L2 LINE L2 -17 3296 3105 644 298 13 14 chr10 17823396 17823581 -122493184 + MIR SINE MIR 2 180 -62 199 321 7 102 chr10 17823664 17823801 -122492964 - L2 LINE L2 -219 3053 2930 285 350 81 0 chr10 17823815 17823938 -122492827 + MIR3 SINE MIR 73 205 -3 206 380 28 42 chr10 17824577 17824719 -122492046 - MIR3 SINE MIR -53 155 16 2155 56 0 4 chr10 17824987 17825256 -122491509 - L1PA10 LINE L1 -189 5979 5712 214 359 88 19 chr10 17825946 17826105 -122490660 + L2 LINE L2 2237 2406 -908 2108 124 0 3 chr10 17826158 17826449 -122490316 - AluSq SINE Alu -23 290 1 718 130 0 7 chr10 17826478 17826607 -122490158 + L1P4 LINE L1 5656 5780 -386 765 125 0 10 chr10 17826607 17826711 -122490054 - FLAM_C SINE Alu -24 119 17 366 207 99 9 chr10 17826712 17826823 -122489942 - L1MC5 LINE L1 -1103 6858 6738 980 191 0 0 chr10 17826835 17826997 -122489768 - FRAM SINE Alu -15 161 1 2197 115 0 7 chr10 17827005 17827309 -122489456 - AluSc SINE Alu -7 302 1 2024 225 23 62 chr10 17827368 17827400 -122489365 + L1ME1 LINE L1 5572 5604 -730 2378 63 0 40 chr10 17827400 17827702 -122489063 + AluY SINE Alu 1 290 -21 2024 225 23 62 chr10 17827702 17828299 -122488466 + L1ME1 LINE L1 5604 6334 0 326 292 11 0 chr10 17828307 17828396 -122488369 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17829783 17829805 -122486960 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17829864 17830110 -122486655 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17830155 17830441 -122486324 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17830441 17830614 -122486151 + AluSg/x SINE Alu 134 312 0 267 261 54 9 chr10 17831221 17831332 -122485433 + L1MC3 LINE L1 6708 6823 -962 1231 167 48 13 chr10 17831543 17831555 -122485210 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17831555 17831935 -122484830 - THE1B LTR MaLR 0 364 1 1231 167 48 13 chr10 17831935 17832150 -122484615 - MER46A DNA MER2_type -2505 226 1 225 97 0 0 chr10 17832191 17832222 -122484543 + Tigger4(Zombi) DNA MER2_type 1 31 -2700 298 377 36 7 chr10 17834910 17835048 -122481717 - L2 LINE L2 -220 3052 2911 2280 118 0 0 chr10 17835253 17835559 -122481206 - AluSx SINE Alu 0 312 7 200 264 0 28 chr10 17835746 17835785 -122480980 + A-rich Low_complexity Low_complexity 1 39 -31 2838 128 21 26 chr10 17835785 17836213 -122480552 - MSTB LTR MaLR 0 426 1 200 264 0 28 chr10 17836213 17836245 -122480520 + A-rich Low_complexity Low_complexity 39 70 0 228 337 20 0 chr10 17837006 17837104 -122479661 - MIR3 SINE MIR -14 194 95 24 77 0 0 chr10 17837190 17837242 -122479523 + AT_rich Low_complexity Low_complexity 1 52 0 3502 130 47 6 chr10 17837594 17837916 -122478849 + MER41C LTR ERV1 3 357 -197 339 25 0 0 chr10 17837916 17837956 -122478809 + (CA)n Simple_repeat Simple_repeat 1 40 0 3502 130 47 6 chr10 17837956 17838163 -122478602 + MER41C LTR ERV1 357 554 0 239 0 32 0 chr10 17838537 17838568 -122478197 + (TG)n Simple_repeat Simple_repeat 2 33 0 1456 157 72 96 chr10 17838984 17839003 -122477762 + MLT1B LTR MaLR 37 55 -335 4755 131 26 53 chr10 17839003 17839800 -122476965 - MER4E LTR ERV1 -3 776 1 1456 157 72 96 chr10 17839800 17840143 -122476622 + MLT1B LTR MaLR 55 390 0 2068 125 0 7 chr10 17840349 17840637 -122476128 + AluSx SINE Alu 1 286 -26 4396 102 2 0 chr10 17840673 17841224 -122475541 - MER41A LTR ERV1 0 554 3 1851 157 0 11 chr10 17843098 17843406 -122473359 - AluJb SINE Alu 0 305 1 2205 91 0 10 chr10 17843708 17844006 -122472759 + AluY SINE Alu 1 295 -16 1649 171 0 37 chr10 17844102 17844423 -122472342 + AluJo SINE Alu 1 309 -3 2083 108 0 69 chr10 17847106 17847441 -122469324 - AluSx SINE Alu 0 312 1 1953 120 38 7 chr10 17848346 17848637 -122468128 - AluSx SINE Alu -12 300 1 1717 163 14 10 chr10 17848965 17849254 -122467511 + AluJo SINE Alu 1 290 -22 32 0 0 0 chr10 17849254 17849286 -122467479 + AT_rich Low_complexity Low_complexity 1 32 0 1597 186 3 26 chr10 17849951 17850262 -122466503 - AluJo SINE Alu -8 304 1 315 270 80 10 chr10 17851104 17851204 -122465561 - MIR SINE MIR -70 192 86 2036 125 6 22 chr10 17852758 17853071 -122463694 + AluSx SINE Alu 1 308 -4 288 0 0 0 chr10 17853371 17853403 -122463362 + (T)n Simple_repeat Simple_repeat 1 32 0 257 279 85 31 chr10 17856129 17856258 -122460507 + L1ME4a LINE L1 5716 5851 -391 4013 200 19 1 chr10 17857511 17858247 -122458518 + MSTA-int LTR MaLR 903 1651 0 2584 157 26 9 chr10 17858247 17858668 -122458097 + MSTA LTR MaLR 1 428 0 1519 234 57 41 chr10 17858669 17859160 -122457605 + L1ME4a LINE L1 5491 5989 -132 297 211 53 0 chr10 17859160 17859236 -122457529 + L1ME4a LINE L1 5940 6019 -102 637 244 116 6 chr10 17859282 17859446 -122457319 - MER5A DNA MER1_type 0 189 8 26 74 0 0 chr10 17859470 17859524 -122457241 + AT_rich Low_complexity Low_complexity 1 54 0 423 353 25 47 chr10 17859637 17859872 -122456893 - MIR SINE MIR -13 249 20 22 0 0 0 chr10 17860068 17860090 -122456675 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 17860169 17860191 -122456574 + AT_rich Low_complexity Low_complexity 1 22 0 1803 207 23 10 chr10 17860230 17860621 -122456144 - L1MB3 LINE L1 -2 6181 5786 1276 195 69 36 chr10 17860621 17860852 -122455913 + MER2 DNA MER2_type 1 223 -122 2218 112 3 31 chr10 17860852 17861173 -122455592 - AluSx SINE Alu 0 312 1 1276 195 69 36 chr10 17861173 17861205 -122455560 + MER2 DNA MER2_type 223 252 -93 695 202 34 0 chr10 17861205 17861324 -122455441 - FLAM_A SINE Alu -10 123 1 1276 195 69 36 chr10 17861324 17861393 -122455372 + MER2 DNA MER2_type 252 345 0 2069 195 90 16 chr10 17861393 17861945 -122454820 - L1MB3 LINE L1 -396 5787 5195 4664 174 36 19 chr10 17861977 17863510 -122453255 - L1MA6 LINE L1 -6 6996 5443 1687 169 57 6 chr10 17863526 17863875 -122452890 - Tigger2a DNA MER2_type -67 367 1 9943 221 61 30 chr10 17863875 17864384 -122452381 - L1MA6 LINE L1 -1404 5444 4952 7421 32 21 0 chr10 17864384 17865317 -122451448 - L1PA4 LINE L1 0 6155 5213 9943 221 61 30 chr10 17865317 17866051 -122450714 - L1MA6 LINE L1 -1896 4952 4242 2906 79 2 5 chr10 17866051 17866444 -122450321 - L1PA7 LINE L1 0 6154 5763 9943 221 61 30 chr10 17866444 17869443 -122447322 - L1MA6 LINE L1 -2606 4242 1370 939 303 91 30 chr10 17870024 17870631 -122446134 - L1MA6 LINE L1 -6132 717 74 * 2447 226 12 8 chr10 17870629 17871279 -122445486 - L1M4 LINE L1 -934 5212 4560 261 139 0 0 chr10 17873482 17873525 -122443240 + (A)n Simple_repeat Simple_repeat 1 43 0 2217 113 0 3 chr10 17874083 17874385 -122442380 + AluSq SINE Alu 1 301 -12 1638 157 6 62 chr10 17874392 17874716 -122442049 + AluJo SINE Alu 1 306 -6 189 288 109 49 chr10 17874888 17875072 -122441693 + L2 LINE L2 3026 3220 -93 276 316 53 0 chr10 17875360 17875455 -122441310 - MIR SINE MIR -123 139 40 1149 181 0 5 chr10 17876171 17876410 -122440355 + AluJb SINE Alu 86 323 0 569 237 144 21 chr10 17877149 17877343 -122439422 + MIR SINE MIR 43 260 -2 1795 130 59 15 chr10 17877383 17877707 -122439058 + MER44D DNA MER2_type 2 609 0 352 327 12 36 chr10 17877825 17877993 -122438772 - L2 LINE L2 -927 2387 2224 267 236 0 0 chr10 17878137 17878209 -122438556 + (TA)n Simple_repeat Simple_repeat 1 72 0 303 333 0 0 chr10 17878216 17878306 -122438459 + L1MC4 LINE L1 6614 6703 -1339 207 204 0 0 chr10 17878306 17878350 -122438415 + (TA)n Simple_repeat Simple_repeat 2 45 0 310 333 0 0 chr10 17878350 17878440 -122438325 + L1MC4 LINE L1 6614 6703 -1339 2313 96 0 7 chr10 17879323 17879625 -122437140 - AluSq SINE Alu -13 300 1 678 276 67 41 chr10 17880220 17880564 -122436201 + L1ME3A LINE L1 5808 6160 -10 294 296 62 62 chr10 17880607 17880810 -122435955 + HAL1b LINE L1 345 550 -798 970 205 22 119 chr10 17880810 17881214 -122435551 + MLT1A1 LTR MaLR 1 365 0 294 296 62 62 chr10 17881214 17881318 -122435447 + HAL1b LINE L1 549 652 -696 257 227 30 0 chr10 17881360 17881426 -122435339 + (TA)n Simple_repeat Simple_repeat 1 68 0 2349 91 3 0 chr10 17881650 17881947 -122434818 - AluSc SINE Alu -11 298 1 1851 231 52 8 chr10 17883949 17884429 -122432336 + MLT1D LTR MaLR 1 501 -4 2357 144 31 9 chr10 17885292 17885715 -122431050 - MSTB1 LTR MaLR 0 432 1 236 254 174 65 chr10 17885764 17886039 -122430726 + MLT1H LTR MaLR 245 549 0 1929 124 28 14 chr10 17886213 17886496 -122430269 - AluSg SINE Alu -23 287 1 1594 55 0 5 chr10 17886630 17886829 -122429936 + AluY SINE Alu 101 298 -13 409 308 91 29 chr10 17886829 17887203 -122429562 - L1ME LINE L1 -412 5709 5313 1602 221 48 8 chr10 17887672 17888030 -122428735 + MLT1A2 LTR MaLR 3 374 0 270 252 147 49 chr10 17888269 17888412 -122428353 + MIR SINE MIR 13 169 -93 1919 140 0 52 chr10 17888591 17888919 -122427846 + AluSx SINE Alu 1 311 -1 1616 158 83 70 chr10 17890150 17890535 -122426230 + MLT1B LTR MaLR 1 390 0 268 326 54 46 chr10 17890878 17890919 -122425846 + L1MEc LINE L1 274 313 -6250 2567 95 24 11 chr10 17890919 17891289 -122425476 - THE1C LTR MaLR 0 375 1 268 326 54 46 chr10 17891289 17891615 -122425150 + L1MEc LINE L1 313 644 -5919 440 250 48 108 chr10 17891825 17892388 -122424377 + L1MEc LINE L1 796 1324 -5239 312 291 101 14 chr10 17892426 17892574 -122424191 + L1MEc LINE L1 1174 1334 -5050 612 257 51 36 chr10 17892846 17893177 -122423588 + L1MEc LINE L1 1743 2078 -4485 828 236 113 25 chr10 17893226 17893547 -122423218 + L1MEc LINE L1 2926 3296 -3086 2161 105 0 16 chr10 17893547 17893851 -122422914 + AluY SINE Alu 1 299 -12 828 236 113 25 chr10 17893851 17893961 -122422804 + L1MEc LINE L1 3296 3395 -2987 5694 73 0 3 chr10 17894090 17894829 -122421936 - L1PA8 LINE L1 -16 6156 5420 1287 52 0 0 chr10 17894841 17894995 -122421770 - AluY SINE Alu 0 311 158 2179 105 27 0 chr10 17894997 17895293 -122421472 - AluSp SINE Alu -9 304 1 3899 227 148 10 chr10 17895311 17896743 -122420022 + L1MEc LINE L1 3648 5277 -1105 548 217 36 18 chr10 17896738 17896904 -122419861 + L1MB8 LINE L1 5979 6147 -31 * 514 311 44 17 chr10 17897052 17897232 -122419533 - L2 LINE L2 -558 2756 2572 25 0 0 0 chr10 17897988 17898013 -122418752 + AT_rich Low_complexity Low_complexity 1 25 0 241 209 176 55 chr10 17898696 17898787 -122417978 + MIR SINE MIR 45 146 -62 1728 188 7 7 chr10 17899232 17899541 -122417224 + AluJo SINE Alu 1 309 -3 189 107 0 0 chr10 17900002 17900030 -122416735 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 367 265 73 20 chr10 17900602 17900753 -122416012 - MIR SINE MIR -5 257 99 2010 123 27 30 chr10 17900759 17901124 -122415641 - THE1B LTR MaLR 0 364 1 295 191 67 34 chr10 17901131 17901220 -122415545 - MIR SINE MIR -170 92 1 207 0 0 0 chr10 17902048 17902071 -122414694 + (T)n Simple_repeat Simple_repeat 1 23 0 1491 241 95 62 chr10 17902550 17903145 -122413620 + L2 LINE L2 2094 2713 -601 1642 188 0 3 chr10 17903145 17903427 -122413338 + AluJo SINE Alu 13 293 -19 1491 241 95 62 chr10 17903427 17903475 -122413290 + L2 LINE L2 2713 2758 -556 1751 209 60 28 chr10 17903476 17903945 -122412820 - MLT1D LTR MaLR 0 505 22 691 238 175 21 chr10 17903947 17904411 -122412354 + L2 LINE L2 2754 3311 -2 445 267 142 36 chr10 17905308 17905533 -122411232 + MIR SINE MIR 14 262 0 258 336 9 18 chr10 17906123 17906233 -122410532 - MER5B DNA MER1_type -69 109 1 2106 122 3 3 chr10 17906246 17906549 -122410216 - AluJb SINE Alu -9 303 1 238 191 330 11 chr10 17906951 17907045 -122409720 - L2 LINE L2 0 3313 3190 1367 157 48 13 chr10 17909158 17909387 -122407378 - AluJo SINE Alu -19 293 57 30 0 0 0 chr10 17909841 17909871 -122406894 + AT_rich Low_complexity Low_complexity 1 30 0 2001 155 0 3 chr10 17910498 17910801 -122405964 - AluJb SINE Alu -6 306 5 23 0 0 0 chr10 17910805 17910828 -122405937 + AT_rich Low_complexity Low_complexity 1 23 0 1719 162 20 47 chr10 17910831 17911233 -122405532 - L1MA8 LINE L1 -2 6289 5899 911 154 77 5 chr10 17911536 17911731 -122405034 + L1MB2 LINE L1 5962 6170 -1 2372 151 16 25 chr10 17911744 17912182 -122404583 + Tigger2a DNA MER2_type 1 434 0 250 96 53 32 chr10 17912182 17912276 -122404489 + (TG)n Simple_repeat Simple_repeat 1 96 0 464 139 42 18 chr10 17912353 17912519 -122404246 + (TG)n Simple_repeat Simple_repeat 2 171 0 27 0 0 0 chr10 17912622 17912649 -122404116 + AT_rich Low_complexity Low_complexity 1 27 0 442 284 47 38 chr10 17913860 17914071 -122402694 + MIR SINE MIR 20 232 -30 22 0 0 0 chr10 17914575 17914597 -122402168 + AT_rich Low_complexity Low_complexity 1 22 0 1726 173 0 24 chr10 17914600 17914895 -122401870 + AluJb SINE Alu 1 288 -24 2349 103 3 0 chr10 17915610 17915920 -122400845 + AluSq SINE Alu 1 311 -2 1891 151 13 16 chr10 17916317 17916622 -122400143 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 17916652 17916812 -122399953 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 17916957 17917258 -122399507 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 17917677 17917718 -122399047 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 17918140 17918405 -122398360 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 17918600 17919012 -122397753 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17919611 17919640 -122397125 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17920716 17920749 -122396016 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 17921816 17922110 -122394655 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 17922114 17922236 -122394529 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17922236 17922258 -122394507 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 17922258 17922430 -122394335 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 17923578 17923689 -122393076 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 17924685 17924882 -122391883 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 17924891 17925064 -122391701 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17926340 17926363 -122390402 + (A)n Simple_repeat Simple_repeat 1 23 0 243 61 0 0 chr10 17928024 17928057 -122388708 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 17928307 17928607 -122388158 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 17929716 17929971 -122386794 + AluSx SINE Alu 44 301 -11 1001 167 261 29 chr10 17930200 17930445 -122386320 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17932184 17932208 -122384557 + AT_rich Low_complexity Low_complexity 1 24 0 426 87 0 29 chr10 17932292 17932361 -122384404 - Alu SINE Alu -5 307 241 1116 145 124 0 chr10 17933401 17933594 -122383171 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17934044 17934107 -122382658 + GA-rich Low_complexity Low_complexity 5 65 0 1303 199 63 11 chr10 17935639 17935925 -122380840 - AluJo SINE Alu -11 301 1 843 159 0 0 chr10 17937087 17937219 -122379546 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17937852 17937879 -122378886 + AT_rich Low_complexity Low_complexity 1 27 0 1967 160 3 3 chr10 17938287 17938593 -122378172 - AluJb SINE Alu -6 306 1 2106 132 0 0 chr10 17938741 17939036 -122377729 - AluSc SINE Alu -14 295 1 180 97 0 0 chr10 17939039 17939070 -122377695 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 888 259 127 3 chr10 17939132 17939464 -122377301 - L1MC4 LINE L1 -150 7892 7520 941 237 24 0 chr10 17939470 17939642 -122377123 - AluJb SINE Alu -16 296 117 195 42 0 0 chr10 17939642 17939666 -122377099 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 941 237 24 0 chr10 17939666 17939700 -122377065 - AluJb SINE Alu -195 117 85 2400 121 55 38 chr10 17939736 17939918 -122376847 - MSTA LTR MaLR -1 427 250 2659 93 11 16 chr10 17939918 17940283 -122376482 - THE1B LTR MaLR -1 363 1 2400 121 55 38 chr10 17940283 17940385 -122376380 - MSTA LTR MaLR -178 250 151 2962 98 43 14 chr10 17940385 17940789 -122375976 + MLT2A2 LTR ERVL 1 421 -32 807 108 0 0 chr10 17940789 17940909 -122375856 + (TA)n Simple_repeat Simple_repeat 1 120 0 2962 98 43 14 chr10 17940909 17940944 -122375821 + MLT2A2 LTR ERVL 421 453 0 2400 121 55 38 chr10 17940944 17941078 -122375687 - MSTA LTR MaLR -277 151 1 658 230 74 39 chr10 17941078 17941308 -122375457 - L1MC4 LINE L1 -565 7477 7240 324 207 11 81 chr10 17941325 17941412 -122375353 + MER20 DNA MER1_type 4 84 -135 274 250 0 0 chr10 17941407 17941471 -122375294 + Charlie5 DNA MER1_type 2560 2623 0 * 433 268 16 16 chr10 17941481 17941604 -122375161 + MER20 DNA MER1_type 97 219 0 1607 248 26 75 chr10 17941605 17942209 -122374556 - L1MC4a LINE L1 -813 6995 6421 2188 147 28 0 chr10 17942885 17943239 -122373526 + THE1B LTR MaLR 1 364 0 275 268 82 0 chr10 17943530 17943627 -122373138 - MLT1J LTR MaLR 0 511 407 1570 195 37 28 chr10 17943691 17944045 -122372720 + MLT1A1 LTR MaLR 9 365 0 1010 241 122 4 chr10 17944045 17944323 -122372442 - MLT1J LTR MaLR -200 311 1 2037 156 119 8 chr10 17946004 17946389 -122370376 + MSTA LTR MaLR 1 428 0 1878 114 0 0 chr10 17946453 17946698 -122370067 - AluSx SINE Alu -57 255 11 29 0 0 0 chr10 17946702 17946731 -122370034 + AT_rich Low_complexity Low_complexity 1 29 0 1989 128 29 10 chr10 17946733 17947039 -122369726 + AluSx SINE Alu 1 312 0 2155 117 14 0 chr10 17947621 17947912 -122368853 - AluSg SINE Alu -15 295 1 22 56 0 0 chr10 17948435 17948471 -122368294 + AT_rich Low_complexity Low_complexity 1 36 0 2753 164 57 20 chr10 17949196 17949685 -122367080 + MLT2B2 LTR ERVL 2 508 -7 431 313 50 11 chr10 17949920 17950102 -122366663 - MIR3 SINE MIR -1 207 19 2424 90 0 6 chr10 17950455 17950767 -122365998 + AluSx SINE Alu 3 312 0 521 268 52 31 chr10 17950783 17950977 -122365788 - MIR SINE MIR 0 262 65 304 139 0 0 chr10 17952597 17952640 -122364125 + MER66B LTR ERV1 304 346 -140 2269 98 0 0 chr10 17953231 17953528 -122363237 - AluSx SINE Alu 0 312 16 2297 142 27 3 chr10 17953713 17954079 -122362686 + THE1C LTR MaLR 1 375 0 3217 210 65 39 chr10 17954623 17954888 -122361877 + L1MC2 LINE L1 8 264 -5969 255 31 0 0 chr10 17954888 17954920 -122361845 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3217 210 65 39 chr10 17954920 17955996 -122360769 + L1MC2 LINE L1 264 1384 -4849 10035 214 46 35 chr10 17956007 17957316 -122359449 + L1MC2 LINE L1 2181 3474 -3288 262 74 481 0 chr10 17957316 17957370 -122359395 + MADE1 DNA Mariner 1 80 0 10035 214 46 35 chr10 17957370 17960382 -122356383 + L1MC2 LINE L1 3474 6589 -173 1354 111 0 43 chr10 17960382 17960609 -122356156 + AluSg/x SINE Alu 86 303 0 643 212 60 13 chr10 17960610 17960761 -122356004 + L1MC2 LINE L1 6583 6740 -22 2337 51 31 17 chr10 17960771 17961065 -122355700 + AluY SINE Alu 1 298 -13 510 315 98 0 chr10 17961759 17961962 -122354803 + MIR SINE MIR 17 239 -23 1844 132 7 28 chr10 17962142 17962430 -122354335 - AluSx SINE Alu -18 294 13 226 79 0 79 chr10 17962431 17962469 -122354296 - AluSx SINE Alu -265 35 1 2379 88 0 0 chr10 17963128 17963425 -122353340 + AluY SINE Alu 6 302 -9 2077 128 3 19 chr10 17963579 17963892 -122352873 + AluSq SINE Alu 3 310 -3 199 339 68 0 chr10 17963894 17964012 -122352753 + MIR SINE MIR 56 181 -81 2005 173 18 33 chr10 17964077 17964471 -122352294 + MLT1B LTR MaLR 1 388 -2 21 0 0 0 chr10 17964968 17964989 -122351776 + AT_rich Low_complexity Low_complexity 1 21 0 2086 122 0 31 chr10 17965320 17965640 -122351125 + AluSx SINE Alu 1 310 -2 1339 196 44 86 chr10 17966116 17966161 -122350604 + MER7A DNA MER2_type 2 47 -2991 1523 183 0 0 chr10 17966161 17966418 -122350347 + AluJb SINE Alu 41 297 -15 1339 196 44 86 chr10 17966418 17966734 -122350031 + MER7A DNA MER2_type 47 346 0 635 216 114 0 chr10 17966737 17966904 -122349861 - MIR SINE MIR -2 260 75 2432 89 0 6 chr10 17967541 17967855 -122348910 + AluSx SINE Alu 1 312 0 909 190 103 10 chr10 17968367 17968562 -122348203 - AluJo SINE Alu -16 296 84 317 276 102 53 chr10 17968858 17969104 -122347661 - MIR SINE MIR -2 260 3 1913 156 0 28 chr10 17969539 17969860 -122346905 + AluJo SINE Alu 1 312 0 193 216 20 0 chr10 17970930 17970981 -122345784 - L2 LINE L2 -1 3312 3261 658 270 65 14 chr10 17971494 17971709 -122345056 + Charlie8 DNA MER1_type 54 279 -2138 1482 219 102 8 chr10 17973927 17974319 -122342446 - L1MC4 LINE L1 -407 7635 7207 993 237 71 4 chr10 17974493 17974746 -122342019 - MLT1B LTR MaLR 0 390 121 978 201 212 0 chr10 17975315 17975584 -122341181 - MER21B LTR ERV1 -11 852 527 301 281 45 0 chr10 17975817 17975906 -122340859 + L2 LINE L2 3180 3272 0 25 31 0 0 chr10 17976155 17976187 -122340578 + AT_rich Low_complexity Low_complexity 1 32 0 477 273 122 18 chr10 17976283 17976569 -122340196 - L3 LINE CR1 -576 1001 686 859 142 0 0 chr10 17976616 17976743 -122340022 - AluSg/x SINE Alu -19 293 167 2529 161 9 14 chr10 17977169 17977597 -122339168 + MSTB LTR MaLR 1 426 0 6501 184 10 1 chr10 17977597 17978713 -122338052 + MSTB-int LTR MaLR 1 1126 -525 537 256 156 0 chr10 17979019 17979218 -122337547 - MIR SINE MIR -1 261 32 1674 200 0 10 chr10 17979425 17979735 -122337030 - AluJo SINE Alu -5 307 1 2161 124 3 7 chr10 17979898 17980204 -122336561 - AluSx SINE Alu -7 305 1 956 179 0 39 chr10 17980647 17980854 -122335911 + L1MB8 LINE L1 5980 6178 0 360 0 0 0 chr10 17981011 17981051 -122335714 + (TG)n Simple_repeat Simple_repeat 2 41 0 296 278 111 19 chr10 17981089 17981197 -122335568 - L2 LINE L2 0 3313 3196 212 169 0 17 chr10 17981741 17981800 -122334965 + (TATG)n Simple_repeat Simple_repeat 3 60 0 482 299 54 9 chr10 17982483 17982707 -122334058 + L1ME4a LINE L1 5669 5902 -219 1942 121 4 0 chr10 17982993 17983265 -122333500 - AluSx SINE Alu -26 286 14 266 325 19 39 chr10 17983502 17983656 -122333109 - MER5A DNA MER1_type -4 185 35 2280 103 0 13 chr10 17983813 17984113 -122332652 + AluSq SINE Alu 1 296 -17 770 99 0 0 chr10 17985190 17985301 -122331464 - AluY SINE Alu -3 308 198 2117 130 23 0 chr10 17985306 17985606 -122331159 - AluSx SINE Alu -5 307 1 2070 123 32 0 chr10 17986191 17986476 -122330289 + AluSx SINE Alu 1 294 -18 216 67 0 0 chr10 17987210 17987240 -122329525 + (TG)n Simple_repeat Simple_repeat 1 30 0 193 0 0 86 chr10 17989013 17989048 -122327717 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17989259 17989281 -122327484 + AT_rich Low_complexity Low_complexity 1 22 0 273 352 74 31 chr10 17990038 17990200 -122326565 + L2 LINE L2 3005 3173 -99 259 281 22 11 chr10 17990671 17990760 -122326005 - MIR3 SINE MIR -36 172 83 447 179 0 0 chr10 17991176 17991271 -122325494 + L1MB8 LINE L1 6083 6177 -1 192 344 18 37 chr10 17992811 17992974 -122323791 + L2 LINE L2 583 742 -2572 2199 129 0 3 chr10 17994022 17994324 -122322441 - AluSx SINE Alu -11 301 1 7441 21 2 8 chr10 17994752 17995613 -122321152 + L1PA4 LINE L1 5300 6155 0 726 288 86 23 chr10 17996703 17997139 -122319626 + L2 LINE L2 2562 3032 -281 1149 132 12 0 chr10 17997145 17997312 -122319453 + AluSg/x SINE Alu 135 303 -7 195 222 37 25 chr10 17997348 17997429 -122319336 + L2 LINE L2 3081 3162 -151 1338 163 5 0 chr10 17997431 17997640 -122319125 - AluJo SINE Alu -16 296 87 409 288 27 34 chr10 17997644 17997790 -122318975 + L2 LINE L2 3168 3312 -1 328 277 185 50 chr10 17997819 17998559 -122318206 + L2 LINE L2 2369 3268 -45 287 229 12 24 chr10 17999173 17999256 -122317509 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2247 117 3 0 chr10 17999371 17999680 -122317085 + AluSq SINE Alu 2 311 -2 1891 151 13 16 chr10 18000077 18000382 -122316383 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 18000412 18000572 -122316193 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 18000717 18001018 -122315747 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 18001437 18001478 -122315287 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 18001900 18002165 -122314600 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 18002360 18002772 -122313993 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 18003371 18003400 -122313365 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 18004476 18004509 -122312256 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 18005576 18005870 -122310895 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 18005874 18005996 -122310769 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 18005996 18006018 -122310747 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 18006018 18006190 -122310575 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 18007338 18007449 -122309316 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 18008445 18008642 -122308123 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 18008651 18008824 -122307941 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 18010100 18010123 -122306642 + (A)n Simple_repeat Simple_repeat 1 23 0 222 91 0 0 chr10 18011784 18011817 -122304948 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 18012067 18012367 -122304398 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 18013476 18013731 -122303034 + AluSx SINE Alu 44 301 -11 1097 167 261 29 chr10 18013960 18014205 -122302560 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 18015944 18015968 -122300797 + AT_rich Low_complexity Low_complexity 1 24 0 447 87 0 29 chr10 18016052 18016121 -122300644 - Alu SINE Alu -5 307 241 1112 145 124 0 chr10 18017161 18017354 -122299411 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 18017804 18017867 -122298898 + GA-rich Low_complexity Low_complexity 5 65 0 1286 199 63 11 chr10 18019399 18019685 -122297080 - AluJo SINE Alu -11 301 1 889 159 0 0 chr10 18020847 18020979 -122295786 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 18021612 18021639 -122295126 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr10 18022571 18022593 -122294172 + (A)n Simple_repeat Simple_repeat 1 22 0 805 99 0 0 chr10 18023043 18023154 -122293611 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 18023159 18023459 -122293306 - AluSx SINE Alu -5 307 1 2033 126 32 0 chr10 18024044 18024329 -122292436 + AluSx SINE Alu 1 294 -18 219 88 0 0 chr10 18025063 18025097 -122291668 + (TG)n Simple_repeat Simple_repeat 1 34 0 193 0 0 86 chr10 18026870 18026905 -122289860 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 18027116 18027138 -122289627 + AT_rich Low_complexity Low_complexity 1 22 0 318 341 75 35 chr10 18027882 18028055 -122288710 + L2 LINE L2 2994 3173 -99 289 281 22 11 chr10 18028526 18028615 -122288150 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 18029031 18029118 -122287647 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 18030462 18030829 -122285936 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 18031877 18032179 -122284586 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 18032607 18033466 -122283299 + L1PA4 LINE L1 5300 6153 -2 880 269 121 39 chr10 18034531 18034994 -122281771 + L2 LINE L2 2541 3032 -281 1161 126 12 0 chr10 18035000 18035167 -122281598 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 18035203 18035284 -122281481 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 18035286 18035495 -122281270 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 18035499 18035645 -122281120 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 18035674 18036423 -122280342 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 18037028 18037111 -122279654 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2316 94 3 0 chr10 18037226 18037524 -122279241 + AluSp SINE Alu 2 300 -13 227 269 30 104 chr10 18038809 18038943 -122277822 + L2 LINE L2 3190 3313 0 2418 240 90 9 chr10 18039090 18039777 -122276988 + MER20B DNA MER1_type 7 749 -34 2150 125 13 0 chr10 18039777 18040081 -122276684 + AluSq SINE Alu 6 313 0 2142 71 0 8 chr10 18040416 18040683 -122276082 + AluY SINE Alu 1 265 -46 264 167 0 0 chr10 18040683 18040737 -122276028 + Alu SINE Alu 239 292 -10 262 254 25 82 chr10 18040779 18040901 -122275864 + L2 LINE L2 3122 3236 -36 298 231 68 82 chr10 18041653 18041800 -122274965 - MIR SINE MIR -24 238 94 1720 189 3 6 chr10 18041938 18042251 -122274514 - AluJb SINE Alu 0 312 1 2077 112 0 3 chr10 18043703 18044021 -122272744 - AluSx SINE Alu 0 317 1 677 210 0 9 chr10 18044817 18045249 -122271516 + CT-rich Low_complexity Low_complexity 1 427 0 731 210 2 0 chr10 18045275 18045796 -122270969 + CT-rich Low_complexity Low_complexity 1 522 0 202 352 32 24 chr10 18047359 18047484 -122269281 - L2 LINE L2 -235 3037 2912 262 108 0 0 chr10 18048144 18048181 -122268584 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 491 227 0 38 chr10 18048181 18048366 -122268399 + CT-rich Low_complexity Low_complexity 1 178 0 731 203 0 8 chr10 18048370 18048493 -122268272 - FLAM_A SINE Alu -11 122 1 228 171 24 134 chr10 18048857 18048939 -122267826 + MLT1H LTR MaLR 477 549 0 5730 210 37 18 chr10 18050815 18051558 -122265207 + L1MC/D LINE L1 3881 4608 -1630 1847 170 0 13 chr10 18051558 18051870 -122264895 - AluJo SINE Alu -4 308 1 5730 210 37 18 chr10 18051870 18052709 -122264056 + L1MC/D LINE L1 4608 5495 -743 472 317 40 2 chr10 18052772 18053060 -122263705 + L1MEc LINE L1 1531 1804 -909 573 280 102 33 chr10 18053077 18053745 -122263020 + L1MEc LINE L1 1875 2561 -3654 293 345 154 35 chr10 18053745 18054295 -122262470 + L2 LINE L2 2246 2861 -453 2168 112 3 3 chr10 18054414 18054710 -122262055 - AluSx SINE Alu -16 296 1 395 316 41 25 chr10 18054780 18054976 -122261789 - MIR SINE MIR -59 203 5 2063 108 4 0 chr10 18055117 18055396 -122261369 + AluSg SINE Alu 1 280 -30 324 0 0 0 chr10 18055409 18055445 -122261320 + (CA)n Simple_repeat Simple_repeat 1 36 0 482 299 57 15 chr10 18055489 18055689 -122261076 + MIR SINE MIR 11 213 -49 182 174 22 0 chr10 18057017 18057063 -122259702 + CT-rich Low_complexity Low_complexity 3 49 0 2186 105 33 7 chr10 18057896 18058200 -122258565 - AluSp SINE Alu -1 312 1 2240 106 0 28 chr10 18058200 18058520 -122258245 - AluSq SINE Alu -1 312 1 251 250 0 0 chr10 18058753 18058805 -122257960 + LTR30 LTR ERV1 1 52 -670 680 143 57 109 chr10 18058805 18059029 -122257736 + LTR12 LTR ERV1 100 285 -429 299 235 0 0 chr10 18059030 18059098 -122257667 + LTR30 LTR ERV1 553 620 -102 773 158 25 0 chr10 18059098 18059218 -122257547 + pTR5 LTR ERV1 45 167 -2271 2130 109 4 0 chr10 18062415 18062690 -122254075 - AluSx SINE Alu -7 305 30 214 368 53 0 chr10 18063313 18063389 -122253376 - L2 LINE L2 -43 3229 3150 832 257 77 57 chr10 18063672 18064073 -122252692 + MLT1I LTR MaLR 1 409 0 1977 119 6 45 chr10 18064283 18064594 -122252171 - AluSx SINE Alu -13 299 1 38 0 0 0 chr10 18064667 18064705 -122252060 + AT_rich Low_complexity Low_complexity 1 38 0 1961 138 3 49 chr10 18065197 18065523 -122251242 + AluSx SINE Alu 1 311 -1 249 83 0 0 chr10 18065595 18065631 -122251134 + (TA)n Simple_repeat Simple_repeat 1 36 0 1325 178 204 3 chr10 18065683 18065987 -122250778 + MLT1A1 LTR MaLR 1 365 0 252 0 0 0 chr10 18066366 18066394 -122250371 + (TAGG)n Simple_repeat Simple_repeat 2 29 0 2280 113 0 0 chr10 18066702 18067013 -122249752 + AluSx SINE Alu 1 311 -1 409 278 52 113 chr10 18067049 18067297 -122249468 + MIR SINE MIR 18 250 -12 392 330 78 10 chr10 18069594 18069800 -122246965 - L1M4 LINE L1 -916 5230 5011 463 228 112 93 chr10 18070637 18070852 -122245913 + MER20 DNA MER1_type 1 219 0 2198 122 0 0 chr10 18071270 18071565 -122245200 + AluSx SINE Alu 1 295 -17 333 314 31 18 chr10 18071616 18071845 -122244920 - L1ME LINE L1 -295 5826 5595 2643 243 6 16 chr10 18071922 18072602 -122244163 - L1MB7 LINE L1 -129 6055 5383 331 296 72 85 chr10 18072870 18072985 -122243780 + MLT1K LTR MaLR 180 295 -293 717 261 101 0 chr10 18072985 18073173 -122243592 + MER63A DNA MER1_type 2 208 -2 331 296 72 85 chr10 18073173 18073445 -122243320 + MLT1K LTR MaLR 295 562 -26 2113 126 10 0 chr10 18075995 18076379 -122240386 + AluSx SINE Alu 1 387 0 23 33 0 0 chr10 18077216 18077246 -122239519 + AT_rich Low_complexity Low_complexity 1 30 0 2245 88 0 10 chr10 18077249 18077545 -122239220 - AluY SINE Alu -18 293 1 219 237 26 13 chr10 18078690 18078766 -122237999 + (TA)n Simple_repeat Simple_repeat 2 78 0 292 255 64 43 chr10 18078773 18078867 -122237898 - MIR SINE MIR -95 113 18 321 254 201 27 chr10 18079123 18079347 -122237418 - L1ME4a LINE L1 -13 6108 5846 2375 82 3 0 chr10 18080064 18080358 -122236407 - AluSp SINE Alu -18 295 1 21 0 0 0 chr10 18080358 18080379 -122236386 + AT_rich Low_complexity Low_complexity 1 21 0 4477 126 20 48 chr10 18080817 18081659 -122235106 + L1MA8 LINE L1 5466 6284 -7 298 302 47 52 chr10 18082832 18082893 -122233872 - MER5A DNA MER1_type -3 186 126 1627 97 39 130 chr10 18082893 18083224 -122233541 + AluSp SINE Alu 1 301 -12 298 302 47 52 chr10 18083224 18083334 -122233431 - MER5A DNA MER1_type -63 126 16 194 269 30 15 chr10 18084851 18084918 -122231847 - L2 LINE L2 -655 2659 2592 419 249 109 24 chr10 18085037 18085202 -122231563 + MER20 DNA MER1_type 1 179 -40 22 0 0 0 chr10 18085752 18085774 -122230991 + AT_rich Low_complexity Low_complexity 1 22 0 1816 151 14 7 chr10 18085777 18086062 -122230703 - AluJb SINE Alu -23 289 3 738 216 28 0 chr10 18086490 18086666 -122230099 - L1MD2 LINE L1 -26 6333 6153 252 0 0 0 chr10 18086666 18086694 -122230071 + (TG)n Simple_repeat Simple_repeat 2 29 0 1569 208 62 20 chr10 18086724 18087162 -122229603 - L1MD1 LINE L1 -160 6342 5887 1870 240 63 21 chr10 18087193 18088126 -122228639 - L1MD1 LINE L1 -743 5663 4751 854 272 36 8 chr10 18088169 18088419 -122228346 + MER76 LTR ERV 432 688 0 4025 243 59 30 chr10 18088424 18088610 -122228155 - L1MD1 LINE L1 -3316 3090 2911 321 89 0 0 chr10 18088610 18088655 -122228110 + (CA)n Simple_repeat Simple_repeat 2 46 0 4025 243 59 30 chr10 18088655 18091182 -122225583 - L1MD1 LINE L1 -3495 2911 273 218 105 26 0 chr10 18091333 18091371 -122225394 + (TA)n Simple_repeat Simple_repeat 1 39 0 254 299 51 29 chr10 18091517 18091654 -122225111 - MIR SINE MIR -57 205 66 208 319 159 6 chr10 18093349 18093506 -122223259 + L2 LINE L2 2698 2878 -436 433 316 65 56 chr10 18093591 18093822 -122222943 + MIR SINE MIR 8 240 -22 201 128 64 21 chr10 18094195 18094242 -122222523 + T-rich Low_complexity Low_complexity 4 52 0 2043 138 3 0 chr10 18094842 18095132 -122221633 + AluSx SINE Alu 1 291 -21 310 232 11 32 chr10 18095157 18095252 -122221513 - L1MC4 LINE L1 -1333 6709 6617 871 116 0 58 chr10 18095254 18095599 -122221166 + (TA)n Simple_repeat Simple_repeat 1 325 0 23 68 0 0 chr10 18095619 18095663 -122221102 + AT_rich Low_complexity Low_complexity 1 44 0 271 319 53 41 chr10 18095908 18096228 -122220537 + L1MEd LINE L1 60 383 -5736 588 296 79 24 chr10 18096297 18096713 -122220052 + L1M4 LINE L1 3725 4163 -1983 90 51 0 6 chr10 18096848 18096911 -122219854 + AT_rich Low_complexity Low_complexity 1 63 -93 186 0 0 81 chr10 18096911 18096948 -122219817 + (TTA)n Simple_repeat Simple_repeat 1 34 0 90 51 0 6 chr10 18096948 18097041 -122219724 + AT_rich Low_complexity Low_complexity 63 156 0 242 243 81 0 chr10 18097053 18097189 -122219576 + L1M4 LINE L1 4329 4475 -1671 1775 183 3 3 chr10 18099095 18099423 -122217342 + AluJo SINE Alu 1 312 0 2154 133 3 0 chr10 18101406 18101707 -122215058 - AluSq SINE Alu -10 303 2 2781 10 0 10 chr10 18102136 18102449 -122214316 - AluYb8 SINE Alu -8 310 1 193 337 45 0 chr10 18102610 18102699 -122214066 - MIR SINE MIR -70 192 100 787 136 19 31 chr10 18103286 18103527 -122213238 + CT-rich Low_complexity Low_complexity 1 238 0 494 287 38 24 chr10 18103821 18104030 -122212735 + HAL1 LINE L1 771 982 -1525 28 48 0 0 chr10 18104030 18104072 -122212693 + AT_rich Low_complexity Low_complexity 1 42 0 1274 271 94 31 chr10 18104088 18104804 -122211961 + HAL1 LINE L1 1622 2382 -125 348 254 232 0 chr10 18104959 18105136 -122211629 + L1ME4a LINE L1 5901 6118 -3 1543 275 112 20 chr10 18105593 18106466 -122210299 - L2 LINE L2 0 3313 2367 2140 125 20 0 chr10 18107549 18107852 -122208913 + AluSg SINE Alu 1 309 -1 325 193 0 0 chr10 18107854 18107911 -122208854 + AluJ/FLAM SINE Alu 1 57 -245 337 267 43 52 chr10 18108172 18108288 -122208477 + L2 LINE L2 3158 3272 0 27 0 0 0 chr10 18109299 18109326 -122207439 + AT_rich Low_complexity Low_complexity 1 27 0 255 259 83 19 chr10 18109608 18109716 -122207049 + MER117 DNA MER1_type 9 123 -74 2302 109 3 0 chr10 18110068 18110371 -122206394 - AluSg1 SINE Alu -1 308 5 1692 161 30 18 chr10 18110537 18110866 -122205899 - MER44D DNA MER2_type -6 603 1 21 0 0 0 chr10 18111053 18111074 -122205691 + AT_rich Low_complexity Low_complexity 1 21 0 2810 174 7 6 chr10 18111163 18111708 -122205057 - L1P LINE L1 -1101 5045 4500 1097 95 6 12 chr10 18111710 18111878 -122204887 + L1PA13 LINE L1 5993 6159 -4 193 311 18 113 chr10 18114432 18114654 -122202111 + L2 LINE L2 1335 1535 -1779 699 297 89 34 chr10 18114664 18115489 -122201276 + L2 LINE L2 1798 3313 0 379 371 81 37 chr10 18115496 18115930 -122200835 + L2 LINE L2 2442 2894 -420 212 248 29 67 chr10 18116071 18116108 -122200657 + L2 LINE L2 3116 3153 -160 1810 181 41 0 chr10 18116108 18116401 -122200364 - AluJb SINE Alu -7 305 1 212 248 29 67 chr10 18116401 18116468 -122200297 + L2 LINE L2 3153 3216 -97 1846 167 10 0 chr10 18117053 18117347 -122199418 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr10 18117911 18117931 -122198834 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 258 329 99 26 chr10 18118244 18118396 -122198369 + MIR SINE MIR 57 219 -43 1120 274 147 35 chr10 18119179 18120068 -122196697 - L2 LINE L2 -6 3307 2334 288 0 0 0 chr10 18120073 18120105 -122196660 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 1073 153 6 0 chr10 18120113 18120283 -122196482 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 18120326 18120392 -122196373 + (TA)n Simple_repeat Simple_repeat 2 68 0 326 228 38 25 chr10 18120581 18120660 -122196105 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 18121345 18121382 -122195383 + polypurine Low_complexity Low_complexity 4 40 0 1833 132 0 4 chr10 18121790 18122062 -122194703 - AluSx SINE Alu -12 300 30 307 270 10 40 chr10 18123392 18123492 -122193273 - MIR3 SINE MIR -1 207 111 618 255 84 38 chr10 18123501 18123740 -122193025 - MIR SINE MIR -7 255 6 2202 103 0 26 chr10 18124234 18124536 -122192229 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 18124595 18124639 -122192126 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 18124910 18125023 -122191742 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 18125556 18125618 -122191147 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 18125852 18125983 -122190782 - FLAM_C SINE Alu 0 133 1 2292 238 53 29 chr10 18126943 18127604 -122189161 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 18127853 18128231 -122188534 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 18128407 18128437 -122188328 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 18128440 18128711 -122188054 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 18128857 18129168 -122187597 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 18129974 18130275 -122186490 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 18130626 18130648 -122186117 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 18131852 18131900 -122184865 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 18134380 18134820 -122181945 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 18134820 18135104 -122181661 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 18135104 18135602 -122181163 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 18135607 18136020 -122180745 + L1M3 LINE L1 5257 5680 -500 694 99 28 21 chr10 18136043 18136184 -122180581 + GA-rich Low_complexity Low_complexity 4 145 0 281 216 68 0 chr10 18136929 18137003 -122179762 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 18138597 18138658 -122178107 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 18138744 18139055 -122177710 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 18139749 18140053 -122176712 - AluSx SINE Alu -7 305 1 2221 110 0 0 chr10 18141191 18141483 -122175282 + AluSg SINE Alu 5 296 -14 810 270 53 31 chr10 18142205 18142431 -122174334 + MIR SINE MIR 5 235 -27 316 305 57 9 chr10 18142525 18142630 -122174135 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 18142693 18142744 -122174021 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 18142832 18142858 -122173907 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 292 336 50 8 chr10 18142866 18142985 -122173780 + L3b LINE CR1 1296 1419 -164 2079 73 36 0 chr10 18143441 18143716 -122173049 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 18143717 18143756 -122173009 + AT_rich Low_complexity Low_complexity 1 39 0 220 325 17 43 chr10 18144600 18144717 -122172048 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 18146871 18147106 -122169659 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 18147106 18147191 -122169574 + GA-rich Low_complexity Low_complexity 2 87 0 2286 99 0 13 chr10 18148349 18148661 -122168104 + AluSx SINE Alu 3 310 -2 537 262 133 14 chr10 18148906 18149116 -122167649 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 18149556 18149601 -122167164 + AT_rich Low_complexity Low_complexity 1 45 0 3009 172 0 25 chr10 18150138 18150702 -122166063 - L1MA6 LINE L1 0 6300 5751 2241 144 66 3 chr10 18150716 18151097 -122165668 + L1MA6 LINE L1 5350 5754 -546 1461 132 0 18 chr10 18151576 18151795 -122164970 + AluSg/x SINE Alu 79 293 -19 1224 175 61 8 chr10 18152249 18152513 -122164252 - L1MA6 LINE L1 -801 5345 5074 3382 211 39 7 chr10 18152514 18153340 -122163425 + L1 LINE L1 4160 5011 -1135 306 287 10 20 chr10 18155436 18155537 -122161228 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 18155659 18155686 -122161079 + AT_rich Low_complexity Low_complexity 1 27 0 618 260 148 9 chr10 18156436 18156659 -122160106 + MIR SINE MIR 2 255 -7 9224 71 2 11 chr10 18157598 18158883 -122157882 + L1P LINE L1 685 2091 -4055 944 214 112 0 chr10 18159108 18159304 -122157461 + MER20 DNA MER1_type 1 218 -1 4025 119 10 2 chr10 18163574 18164164 -122152601 + MER41B LTR ERV1 41 635 0 968 189 98 47 chr10 18164563 18164881 -122151884 + LTR8A LTR ERV1 1 334 -393 240 179 0 0 chr10 18165400 18165439 -122151326 - MLT1L LTR MaLR -130 485 447 22 0 0 0 chr10 18165855 18165877 -122150888 + AT_rich Low_complexity Low_complexity 1 22 0 777 250 71 28 chr10 18165961 18166173 -122150592 - MIR SINE MIR -21 241 21 225 257 48 29 chr10 18166187 18166292 -122150473 - L1MC/D LINE L1 -2031 5777 5671 436 272 94 20 chr10 18166444 18166655 -122150110 + L1MC/D LINE L1 5479 5722 -520 288 204 194 10 chr10 18167602 18167700 -122149065 + MER5C DNA MER1_type 209 324 0 189 0 0 0 chr10 18168421 18168442 -122148323 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 541 302 148 0 chr10 18169310 18169512 -122147253 + MIR SINE MIR 10 241 -21 1337 187 121 18 chr10 18169859 18170191 -122146574 - MLT2B3 LTR ERVL -188 366 1 605 317 118 27 chr10 18170351 18170689 -122146076 - L2 LINE L2 -9 3304 2936 543 259 22 35 chr10 18170879 18171107 -122145658 + L1M4 LINE L1 4777 5001 -1145 781 215 5 96 chr10 18171839 18172086 -122144679 + MER20 DNA MER1_type 1 219 0 1964 108 34 0 chr10 18172613 18172881 -122143884 - AluSx SINE Alu -35 277 1 4215 122 21 19 chr10 18172907 18173586 -122143179 - L1MA6 LINE L1 0 6300 5621 1087 194 198 35 chr10 18173586 18173889 -122142876 - MSTC LTR MaLR -69 359 2 1014 230 115 4 chr10 18173889 18174150 -122142615 - L1 LINE L1 -1765 4381 4092 204 354 73 0 chr10 18174288 18174384 -122142381 - L2 LINE L2 -30 3283 3181 210 250 50 0 chr10 18175633 18175693 -122141072 + MIR SINE MIR 123 185 -77 736 262 36 18 chr10 18175732 18175953 -122140812 - MIR SINE MIR -14 248 24 1988 210 40 15 chr10 18176176 18176695 -122140070 + L1M4 LINE L1 3535 4066 -2080 1664 170 33 95 chr10 18176695 18177084 -122139681 + MLT1A1 LTR MaLR 1 365 0 716 77 7 147 chr10 18177275 18177418 -122139347 - MLT1B LTR MaLR -267 123 1 296 179 179 0 chr10 18177441 18177519 -122139246 + LTR33 LTR ERVL 412 503 -18 209 234 347 8 chr10 18177834 18177958 -122138807 - MIR SINE MIR -92 170 5 486 262 60 113 chr10 18178082 18178165 -122138600 - MIR SINE MIR -27 235 149 2110 133 68 8 chr10 18178165 18178519 -122138246 - THE1C LTR MaLR 0 375 1 486 262 60 113 chr10 18178519 18178683 -122138082 - MIR SINE MIR -113 149 1 298 290 204 40 chr10 18179866 18180497 -122136268 + L2 LINE L2 2156 2890 -424 1107 205 16 77 chr10 18183326 18183638 -122133127 + AluJb SINE Alu 2 294 -8 1062 90 0 0 chr10 18183909 18184042 -122132723 + AluSq/x SINE Alu 1 133 -179 2167 132 7 0 chr10 18184045 18184388 -122132377 + AluSx SINE Alu 1 345 0 1395 122 0 5 chr10 18184518 18184715 -122132050 + AluSq SINE Alu 95 290 -23 214 359 88 19 chr10 18184768 18184927 -122131838 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 18185617 18185886 -122130879 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 18186154 18186296 -122130469 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 18186935 18187058 -122129707 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 18187072 18187209 -122129556 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 18187292 18187477 -122129288 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 18187483 18187664 -122129101 + L2 LINE L2 3105 3296 -17 2241 113 0 0 chr10 18187702 18188003 -122128762 + AluSx SINE Alu 1 301 -11 2168 125 0 0 chr10 18188436 18188740 -122128025 + AluSx SINE Alu 1 304 -8 528 268 42 84 chr10 18188871 18189775 -122126990 - L1MC/D LINE L1 -869 5260 4608 2235 222 48 54 chr10 18189952 18190470 -122126295 + LTR40a LTR ERVL 4 518 -1 766 301 60 93 chr10 18190498 18190640 -122126125 - L1MC/D LINE L1 -4982 1137 992 1876 160 10 7 chr10 18190640 18190940 -122125825 - AluSx SINE Alu -11 301 1 766 301 60 93 chr10 18190940 18191278 -122125487 - L1MC/D LINE L1 -5127 992 644 393 22 0 0 chr10 18191278 18191324 -122125441 + (TG)n Simple_repeat Simple_repeat 2 47 0 766 301 60 93 chr10 18191324 18191990 -122124775 - L1MC/D LINE L1 -5475 644 28 263 182 0 0 chr10 18292841 18292885 -122023880 - Alu SINE Alu -263 45 2 780 158 33 0 chr10 18293103 18293223 -122023542 - AluJb SINE Alu -13 299 176 280 163 0 0 chr10 18293242 18293291 -122023474 - AluSc SINE Alu -81 218 170 280 163 0 0 chr10 18293274 18293323 -122023442 - AluSp/q SINE Alu -83 220 172 280 163 0 0 chr10 18293306 18293355 -122023410 - AluSp/q SINE Alu -83 220 172 280 163 0 0 chr10 18293338 18293387 -122023378 - AluSg/x SINE Alu -82 220 172 280 163 0 0 chr10 18293370 18293419 -122023346 - AluSp/q SINE Alu -83 220 172 830 198 23 23 chr10 18293435 18293652 -122023113 - AluJb SINE Alu -93 219 3 361 236 79 0 chr10 18293736 18293863 -122022902 - AluSc SINE Alu 0 299 163 956 179 40 20 chr10 18293977 18294178 -122022587 + AluSc SINE Alu 103 307 -2 1102 62 17 22 chr10 18294184 18294363 -122022402 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 534 252 0 71 chr10 18294420 18294575 -122022190 + MIR SINE MIR 12 155 -107 23 0 0 0 chr10 18295533 18295556 -122021209 + AT_rich Low_complexity Low_complexity 1 23 0 1070 179 44 28 chr10 18296036 18296288 -122020477 - AluJb SINE Alu -15 297 42 757 167 8 16 chr10 18296969 18297095 -122019670 + FLAM_C SINE Alu 2 126 -17 258 329 99 26 chr10 18297956 18298108 -122018657 + MIR SINE MIR 57 219 -43 1120 274 147 35 chr10 18298891 18299780 -122016985 - L2 LINE L2 -6 3307 2334 324 0 0 0 chr10 18299785 18299821 -122016944 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1089 147 6 0 chr10 18299829 18299999 -122016766 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 18300042 18300108 -122016657 + (TA)n Simple_repeat Simple_repeat 2 68 0 326 228 38 25 chr10 18300297 18300376 -122016389 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 18301061 18301098 -122015667 + polypurine Low_complexity Low_complexity 4 40 0 1791 138 0 4 chr10 18301508 18301777 -122014988 - AluSx SINE Alu -15 297 30 307 270 10 40 chr10 18303109 18303209 -122013556 - MIR3 SINE MIR -1 207 111 574 264 84 38 chr10 18303218 18303457 -122013308 - MIR SINE MIR -7 255 6 2174 106 0 26 chr10 18303951 18304253 -122012512 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 18304312 18304356 -122012409 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 18304627 18304740 -122012025 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 18305273 18305335 -122011430 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 18305569 18305700 -122011065 - FLAM_C SINE Alu 0 133 1 2247 241 53 29 chr10 18306660 18307321 -122009444 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 18307570 18307948 -122008817 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 18308124 18308154 -122008611 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 18308157 18308428 -122008337 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 18308574 18308885 -122007880 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 18309692 18309993 -122006772 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 18310344 18310366 -122006399 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 18311570 18311618 -122005147 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 18314098 18314538 -122002227 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 18314538 18314822 -122001943 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 18314822 18315320 -122001445 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 18315325 18315738 -122001027 + L1M3 LINE L1 5257 5680 -500 350 41 0 20 chr10 18315761 18315810 -122000955 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 466 111 60 17 chr10 18316016 18316133 -122000632 + GA-rich Low_complexity Low_complexity 4 125 0 281 216 68 0 chr10 18316878 18316952 -121999813 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 18318546 18318607 -121998158 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 18318693 18319004 -121997761 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 18319698 18320002 -121996763 - AluSx SINE Alu -7 305 1 2240 110 0 0 chr10 18321140 18321432 -121995333 + AluSg SINE Alu 5 296 -14 743 270 53 31 chr10 18322154 18322380 -121994385 + MIR SINE MIR 5 235 -27 287 305 57 9 chr10 18322474 18322579 -121994186 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 18322642 18322693 -121994072 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 18322781 18322807 -121993958 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 259 336 50 8 chr10 18322815 18322934 -121993831 + L3b LINE CR1 1296 1419 -164 1992 73 36 0 chr10 18323390 18323665 -121993100 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 18323666 18323705 -121993060 + AT_rich Low_complexity Low_complexity 1 39 0 1506 140 21 0 chr10 18326820 18327055 -121989710 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 18327055 18327140 -121989625 + GA-rich Low_complexity Low_complexity 2 87 0 2305 99 0 13 chr10 18328298 18328610 -121988155 + AluSx SINE Alu 3 310 -2 476 262 133 14 chr10 18328855 18329065 -121987700 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 18329505 18329550 -121987215 + AT_rich Low_complexity Low_complexity 1 45 0 2854 172 0 25 chr10 18330087 18330651 -121986114 - L1MA6 LINE L1 0 6300 5751 2223 144 66 3 chr10 18330665 18331046 -121985719 + L1MA6 LINE L1 5350 5754 -546 1470 132 0 18 chr10 18331525 18331744 -121985021 + AluSg/x SINE Alu 77 291 -19 783 237 111 76 chr10 18332021 18332401 -121984364 - MSTD LTR MaLR -3 393 1 2267 108 7 0 chr10 18332561 18332858 -121983907 + AluSp SINE Alu 7 305 -8 2294 119 0 0 chr10 18333417 18333719 -121983046 + AluSx SINE Alu 1 302 -10 237 137 98 0 chr10 18333776 18333827 -121982938 + L2 LINE L2 3217 3272 0 1718 154 32 4 chr10 18334294 18334573 -121982192 - AluJo SINE Alu -25 287 1 2589 49 0 3 chr10 18334913 18335219 -121981546 - AluY SINE Alu -6 305 1 306 291 75 8 chr10 18335337 18335471 -121981294 + MIR SINE MIR 112 254 -8 660 210 90 93 chr10 18335666 18336112 -121980653 + MLT1F1 LTR MaLR 2 537 -30 226 245 21 64 chr10 18336209 18336303 -121980462 + MIR SINE MIR 118 207 -55 2188 118 30 3 chr10 18336390 18336694 -121980071 - AluSx SINE Alu 0 312 1 354 307 63 47 chr10 18336703 18337065 -121979700 + L1MC4a LINE L1 5582 5952 -212 331 267 70 60 chr10 18337405 18337819 -121978946 + L1ME4a LINE L1 5643 6097 -24 22 35 0 0 chr10 18338771 18338800 -121977965 + AT_rich Low_complexity Low_complexity 1 29 0 237 287 50 0 chr10 18339062 18339163 -121977602 - MIR SINE MIR -119 143 38 2125 138 0 0 chr10 18339661 18339951 -121976814 - AluSx SINE Alu -17 295 6 855 194 5 0 chr10 18340865 18341253 -121975512 + GA-rich Low_complexity Low_complexity 1 390 0 2283 103 0 0 chr10 18342570 18342861 -121973904 - AluSc SINE Alu -18 291 1 2239 97 0 35 chr10 18343491 18343801 -121972964 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr10 18344007 18344038 -121972727 + AT_rich Low_complexity Low_complexity 1 31 0 367 287 97 41 chr10 18345153 18345567 -121971198 + L2 LINE L2 1856 2292 -1022 1693 156 57 7 chr10 18345652 18345934 -121970831 - AluJb SINE Alu -16 296 1 295 143 0 0 chr10 18347883 18347925 -121968840 - LTR7 LTR ERV1 -408 42 1 480 300 78 40 chr10 18349579 18349926 -121966839 + L1ME LINE L1 5302 5661 -460 900 92 0 0 chr10 18350303 18350423 -121966342 + L1MA2 LINE L1 6185 6304 0 866 180 87 0 chr10 18351640 18351812 -121964953 + MER5A DNA MER1_type 1 187 -2 4694 68 224 0 chr10 18351812 18352487 -121964278 + LTR12 LTR ERV1 1 826 0 35816 88 30 5 chr10 18352511 18357289 -121959476 + HERV9 LTR ERV1 58 4954 -3445 2092 176 92 78 chr10 18357284 18358209 -121958556 + Harlequin LTR ERV1 842 1720 -5176 * 4733 93 1 15 chr10 18358203 18358856 -121957909 + Harlequin LTR ERV1 7756 8399 0 5615 70 110 0 chr10 18358856 18359600 -121957165 + LTR12 LTR ERV1 1 826 0 210 37 0 0 chr10 18360121 18360148 -121956617 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1651 201 7 0 chr10 18360150 18360429 -121956336 - AluJo SINE Alu -31 281 1 423 193 23 0 chr10 18360700 18360788 -121955977 - MER5A DNA MER1_type -96 93 4 562 262 12 24 chr10 18361013 18361181 -121955584 - MER5B DNA MER1_type -5 173 8 545 305 47 60 chr10 18361863 18362243 -121954522 - L2 LINE L2 0 3272 2898 315 0 0 0 chr10 18362324 18362359 -121954406 + (CA)n Simple_repeat Simple_repeat 1 35 0 257 0 30 0 chr10 18362420 18362453 -121954312 + (CA)n Simple_repeat Simple_repeat 2 35 0 298 0 48 0 chr10 18362515 18362557 -121954208 + (CA)n Simple_repeat Simple_repeat 2 45 0 1593 196 18 0 chr10 18362628 18362909 -121953856 - AluJb SINE Alu -20 292 7 2170 132 35 51 chr10 18364618 18365013 -121951752 - MLT1B LTR MaLR -1 389 1 296 359 16 47 chr10 18365104 18365296 -121951469 - L2 LINE L2 -173 3099 2914 797 205 62 22 chr10 18365324 18365548 -121951217 + MER106A DNA MER1_type 3 235 -1 1943 134 39 0 chr10 18365831 18366114 -121950651 + AluSg SINE Alu 1 294 -16 329 348 59 24 chr10 18366118 18366457 -121950308 - L2 LINE L2 -779 2535 2185 4936 95 1 36 chr10 18369200 18369913 -121946852 + LTR12 LTR ERV1 1 688 0 276 326 21 57 chr10 18369923 18370064 -121946701 - MIR SINE MIR -79 183 48 1540 216 55 9 chr10 18372198 18372637 -121944128 - MLT1C LTR MaLR -3 464 6 2225 108 0 3 chr10 18373339 18373635 -121943130 - AluSc SINE Alu -14 295 1 256 299 76 22 chr10 18374775 18374939 -121941826 + MIR SINE MIR 34 201 -61 21 36 0 0 chr10 18374942 18374970 -121941795 + AT_rich Low_complexity Low_complexity 1 28 0 795 143 30 30 chr10 18375159 18375292 -121941473 + FLAM_C SINE Alu 1 133 0 238 329 155 12 chr10 18375305 18375466 -121941299 - MIR SINE MIR -3 259 76 2145 135 0 3 chr10 18375678 18375981 -121940784 - AluSx SINE Alu -10 302 1 1017 178 11 11 chr10 18376428 18376619 -121940146 - AluJo SINE Alu -121 191 1 1856 139 0 0 chr10 18377853 18378120 -121938645 - AluSx SINE Alu -45 267 1 6033 164 37 18 chr10 18378764 18379321 -121937444 - LTR57-int LTR ERVL -4110 1233 688 201 94 0 0 chr10 18379321 18379353 -121937412 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6033 164 37 18 chr10 18379353 18380005 -121936760 - LTR57-int LTR ERVL -4655 688 1 772 192 24 6 chr10 18380005 18380172 -121936593 - LTR57 LTR ERVL 0 411 242 325 97 0 125 chr10 18380187 18380259 -121936506 - LTR57 LTR ERVL -348 63 1 * 1244 248 35 35 chr10 18380259 18380625 -121936140 - MER45B DNA AcHobo -352 688 323 482 176 64 40 chr10 18380628 18380753 -121936012 + MLT1A2 LTR MaLR 1 128 -246 1917 151 6 22 chr10 18382062 18382374 -121934391 - AluJb SINE Alu -5 307 1 502 370 19 0 chr10 18382930 18383138 -121933627 + MIR SINE MIR 33 244 -18 2094 118 10 7 chr10 18383919 18384223 -121932542 + AluSx SINE Alu 1 305 -7 469 308 138 16 chr10 18384753 18385071 -121931694 + L1ME4a LINE L1 5661 6017 -104 22 30 0 61 chr10 18385426 18385474 -121931291 + AT_rich Low_complexity Low_complexity 1 46 -16 582 103 10 0 chr10 18385474 18385571 -121931194 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 18385571 18385588 -121931177 + AT_rich Low_complexity Low_complexity 46 62 0 333 0 0 0 chr10 18385795 18385832 -121930933 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2126 132 0 0 chr10 18386008 18386319 -121930446 + AluSx SINE Alu 2 312 0 2407 107 3 19 chr10 18387556 18387929 -121928836 + MER1A DNA MER1_type 163 529 0 380 266 166 0 chr10 18387981 18388120 -121928645 - MIR SINE MIR -4 258 97 2106 117 0 0 chr10 18388205 18388510 -121928255 + AluSx SINE Alu 1 305 0 592 233 176 21 chr10 18388891 18389084 -121927681 - MIR SINE MIR 0 262 40 411 246 140 3 chr10 18389858 18389986 -121926779 - MIR SINE MIR -62 146 12 207 287 180 43 chr10 18390450 18390823 -121925942 + L2 LINE L2 2465 2888 -426 321 243 88 88 chr10 18392109 18392245 -121924520 - MER5B DNA MER1_type -36 153 4 1872 123 13 7 chr10 18393216 18393526 -121923239 + L1PA13 LINE L1 5806 6117 -46 431 361 76 8 chr10 18394148 18394411 -121922354 + L3 LINE CR1 130 410 -1167 455 274 91 17 chr10 18394488 18394663 -121922102 + MIR SINE MIR 15 202 -60 479 344 176 23 chr10 18394689 18395293 -121921472 + L3 LINE CR1 530 1225 -352 1085 150 0 0 chr10 18395511 18395671 -121921094 - AluSg/x SINE Alu -16 296 137 327 195 102 59 chr10 18396928 18397046 -121919719 - L2 LINE L2 -4 3268 3146 22 0 0 0 chr10 18398858 18398880 -121917885 + AT_rich Low_complexity Low_complexity 1 22 0 278 306 0 12 chr10 18398881 18398966 -121917799 + (TA)n Simple_repeat Simple_repeat 2 85 0 425 308 126 28 chr10 18400639 18400821 -121915944 - MIR3 SINE MIR -7 201 2 208 127 36 0 chr10 18401638 18401693 -121915072 + (TA)n Simple_repeat Simple_repeat 1 57 0 307 177 40 17 chr10 18401712 18401887 -121914878 + (TA)n Simple_repeat Simple_repeat 1 179 0 1996 122 0 78 chr10 18402922 18403257 -121913508 - AluSx SINE Alu -3 309 1 435 304 109 14 chr10 18405611 18405831 -121910934 + MIR SINE MIR 19 259 -3 1145 171 0 0 chr10 18406045 18406232 -121910533 - AluSg/x SINE Alu -8 302 116 180 0 0 0 chr10 18406344 18406364 -121910401 + (TAA)n Simple_repeat Simple_repeat 2 21 0 200 314 14 0 chr10 18406671 18406741 -121910024 + GA-rich Low_complexity Low_complexity 1 71 0 195 375 156 0 chr10 18407444 18407572 -121909193 + L2 LINE L2 3116 3263 -9 361 346 53 14 chr10 18407842 18408125 -121908640 + L1ME2 LINE L1 134 427 -5969 2282 111 0 3 chr10 18408651 18408958 -121907807 + AluSc SINE Alu 1 306 -3 7011 248 74 62 chr10 18408995 18410046 -121906719 + L1ME2 LINE L1 790 1828 -4403 2338 92 0 13 chr10 18410046 18410360 -121906405 + AluSx SINE Alu 1 310 -2 7011 248 74 62 chr10 18410360 18411623 -121905142 + L1ME2 LINE L1 1828 3075 -3156 2332 91 7 0 chr10 18411623 18411920 -121904845 + AluSq SINE Alu 1 299 -14 7011 248 74 62 chr10 18411920 18413901 -121902864 + L1ME2 LINE L1 3075 5146 -1085 2383 59 3 0 chr10 18413901 18414191 -121902574 + AluY SINE Alu 1 291 -20 7011 248 74 62 chr10 18414191 18414631 -121902134 + L1ME2 LINE L1 5146 5579 -652 1504 215 130 0 chr10 18414642 18415042 -121901723 - MER66A LTR ERV1 0 478 27 1784 238 21 37 chr10 18415066 18415413 -121901352 + L1ME2 LINE L1 5609 5945 -288 2273 79 7 3 chr10 18415413 18415705 -121901060 + AluSg SINE Alu 1 293 -17 1784 238 21 37 chr10 18415705 18415925 -121900840 + L1ME2 LINE L1 5945 6167 -66 2293 98 13 0 chr10 18417686 18417993 -121898772 - AluSp SINE Alu -2 311 1 2192 117 7 0 chr10 18418341 18418649 -121898116 + AluSq SINE Alu 1 310 -3 189 304 22 0 chr10 18418691 18418737 -121898028 - MIR SINE MIR -127 81 35 328 211 18 83 chr10 18418918 18419027 -121897738 + MER5A DNA MER1_type 83 184 -5 510 223 105 46 chr10 18419591 18419829 -121896936 + MER112 DNA MER1_type 9 260 0 480 268 0 18 chr10 18421396 18421508 -121895257 - MIR3 SINE MIR -11 197 88 542 219 55 134 chr10 18422586 18422915 -121893850 - L1MC4 LINE L1 0 8042 7740 652 182 28 35 chr10 18423593 18423736 -121893029 + MIR SINE MIR 100 241 -21 588 266 23 12 chr10 18424376 18424549 -121892216 + L1ME LINE L1 20 194 -6202 * 1930 244 48 26 chr10 18424539 18425229 -121891536 + L1ME LINE L1 663 1367 -5029 601 258 56 48 chr10 18425216 18425468 -121891297 + L1ME1 LINE L1 5850 6103 -63 * 3074 163 14 64 chr10 18426453 18427105 -121889660 - L1MB8 LINE L1 -109 6069 5451 1862 173 7 13 chr10 18427108 18427414 -121889351 - AluJb SINE Alu -8 304 1 5767 213 25 14 chr10 18427445 18428894 -121887871 - L1MB8 LINE L1 -983 5163 3700 209 226 0 19 chr10 18429939 18429992 -121886773 + A-rich Low_complexity Low_complexity 2 53 0 382 180 180 0 chr10 18430024 18430124 -121886641 + FLAM_C SINE Alu 1 118 -15 377 249 63 91 chr10 18430145 18430366 -121886399 + L1ME LINE L1 3165 3379 -2836 233 281 111 46 chr10 18430545 18430933 -121885832 + L1ME LINE L1 3574 3986 -2229 2425 83 3 0 chr10 18431017 18431318 -121885447 - AluSp SINE Alu -11 302 1 309 267 86 76 chr10 18431332 18431437 -121885328 + MIR SINE MIR 5 110 -152 212 267 188 10 chr10 18431662 18431763 -121885002 - L2 LINE L2 0 3272 3154 1286 236 184 38 chr10 18431837 18432468 -121884297 + MER20B DNA MER1_type 1 723 -60 263 333 35 44 chr10 18432513 18432627 -121884138 - L2 LINE L2 -194 3078 2966 376 241 117 29 chr10 18432631 18432646 -121884119 + L1ME LINE L1 5514 5526 -664 2403 110 0 0 chr10 18432646 18432956 -121883809 - AluSx SINE Alu -2 310 1 376 241 117 29 chr10 18432956 18433077 -121883688 + L1ME LINE L1 5526 5662 -528 420 301 43 0 chr10 18433081 18433267 -121883498 + L1ME LINE L1 5698 5891 -299 458 247 86 84 chr10 18434120 18434498 -121882267 + MLT1I LTR MaLR 27 378 -31 255 61 0 0 chr10 18435643 18435676 -121881089 + (CAT)n Simple_repeat Simple_repeat 1 33 0 199 392 98 0 chr10 18435727 18435870 -121880895 + L2 LINE L2 2738 2894 -420 209 343 27 0 chr10 18436164 18436237 -121880528 + L2 LINE L2 3239 3313 0 234 221 132 0 chr10 18436268 18436336 -121880429 - MIR SINE MIR -105 157 81 2202 119 0 10 chr10 18436808 18437111 -121879654 - AluSx SINE Alu -12 300 1 240 209 0 0 chr10 18439366 18439409 -121877356 + MIR SINE MIR 105 147 -61 21 57 0 0 chr10 18439469 18439504 -121877261 + AT_rich Low_complexity Low_complexity 1 35 0 186 376 64 18 chr10 18439795 18439904 -121876861 - MIR SINE MIR -65 143 30 601 288 126 0 chr10 18440334 18440532 -121876233 + MIR SINE MIR 37 259 -3 185 288 17 0 chr10 18440550 18440609 -121876156 + MIR SINE MIR 203 262 0 21 57 0 0 chr10 18440638 18440673 -121876092 + AT_rich Low_complexity Low_complexity 1 35 0 2152 112 3 0 chr10 18440796 18441081 -121875684 + AluSp SINE Alu 1 286 -27 294 50 0 0 chr10 18441081 18441121 -121875644 + (CATA)n Simple_repeat Simple_repeat 2 41 0 226 224 60 15 chr10 18441557 18441624 -121875141 + MIR SINE MIR 69 138 -70 252 234 62 16 chr10 18441715 18441779 -121874986 - MER5A DNA MER1_type -120 69 3 2414 84 0 0 chr10 18443538 18443836 -121872929 - AluSc SINE Alu -11 298 1 2239 109 3 0 chr10 18445036 18445347 -121871418 - AluSx SINE Alu 0 312 1 1325 278 26 11 chr10 18446983 18447415 -121869350 + L1MC5 LINE L1 5297 5737 -597 1254 169 65 26 chr10 18447417 18447648 -121869117 + AluJb SINE Alu 3 242 -70 840 290 95 35 chr10 18447690 18448757 -121868008 + L1MC5 LINE L1 5721 6831 -977 575 263 11 60 chr10 18448910 18449195 -121867570 + L1MC5 LINE L1 6963 7233 -728 313 269 147 0 chr10 18449316 18449472 -121867293 + L1MC5 LINE L1 7292 7470 -491 1012 129 7 0 chr10 18449480 18449635 -121867130 + MER41A LTR ERV1 399 554 0 481 169 22 0 chr10 18449635 18449724 -121867041 + MER41A-int LTR ERV1 1 91 -5855 * 1461 114 38 0 chr10 18449720 18449930 -121866835 + MER41B-int LTR ERV1 5729 5946 0 3613 134 0 2 chr10 18449933 18450478 -121866287 + MER41B LTR ERV1 4 547 -88 262 260 21 31 chr10 18451114 18451210 -121865555 + L1ME LINE L1 658 752 -5453 1157 274 61 31 chr10 18451407 18452017 -121864748 + L1ME LINE L1 1121 1748 -4648 4089 159 45 46 chr10 18452034 18452946 -121863819 + L1MA9 LINE L1 4204 5114 -1032 5612 134 28 52 chr10 18452950 18454025 -121862740 + L1MA9 LINE L1 5264 6312 0 2413 269 123 17 chr10 18454071 18455434 -121861331 + L1ME LINE L1 2544 4050 -2165 1024 307 40 36 chr10 18455463 18455986 -121860779 + MLT1H1 LTR MaLR 30 549 0 1756 262 102 11 chr10 18455986 18456784 -121859981 + L1ME LINE L1 4045 4914 -1301 1895 168 0 9 chr10 18457139 18457454 -121859311 + AluJb SINE Alu 1 312 0 497 287 42 42 chr10 18459300 18459516 -121857249 + MIR SINE MIR 13 228 -34 302 323 19 92 chr10 18459692 18459826 -121856939 + MIR SINE MIR 21 163 -99 1931 151 0 0 chr10 18459826 18460159 -121856606 - AluSx SINE Alu 0 333 1 2105 130 0 34 chr10 18460168 18460490 -121856275 - AluSx SINE Alu -1 311 1 302 323 19 92 chr10 18460490 18460604 -121856161 + MIR SINE MIR 171 261 -1 358 207 47 18 chr10 18462270 18462385 -121854380 + (TA)n Simple_repeat Simple_repeat 2 125 -50 2073 101 24 3 chr10 18462385 18462673 -121854092 - AluSg SINE Alu -16 294 1 358 207 47 18 chr10 18462673 18462726 -121854039 + (TA)n Simple_repeat Simple_repeat 125 175 0 373 265 60 50 chr10 18463285 18463485 -121853280 + Charlie7 DNA MER1_type 59 260 -2352 2217 110 0 0 chr10 18463575 18463867 -121852898 + AluSx SINE Alu 1 292 -20 26 30 0 0 chr10 18463867 18463900 -121852865 + AT_rich Low_complexity Low_complexity 1 33 0 1905 103 22 7 chr10 18463914 18464187 -121852578 + AluSx SINE Alu 23 299 -13 202 209 100 73 chr10 18464188 18464298 -121852467 - MIR SINE MIR -91 171 59 820 267 30 45 chr10 18464364 18464701 -121852064 + Charlie7 DNA MER1_type 310 641 -1971 876 244 125 42 chr10 18464788 18465064 -121851701 + Charlie7 DNA MER1_type 800 1126 -1486 2604 49 0 0 chr10 18465064 18465368 -121851397 - AluY SINE Alu -6 305 2 876 244 125 42 chr10 18465368 18465522 -121851243 + Charlie7 DNA MER1_type 1126 1266 -1346 849 236 33 9 chr10 18465708 18465920 -121850845 - MIR SINE MIR -44 218 2 246 62 0 0 chr10 18465949 18465981 -121850784 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 367 47 13 chr10 18466018 18466465 -121850300 + L1ME LINE L1 4910 5371 -844 380 307 63 24 chr10 18466506 18466711 -121850054 + L1ME LINE L1 5447 5659 -531 324 294 133 7 chr10 18466750 18466893 -121849872 + MLT1J LTR MaLR 5 165 -346 2175 118 17 0 chr10 18468099 18468395 -121848370 - AluSx SINE Alu -11 301 1 317 283 128 49 chr10 18468657 18468922 -121847843 + L1ME LINE L1 5338 5626 -495 2079 114 28 0 chr10 18469214 18469503 -121847262 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr10 18469697 18469726 -121847039 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 18470102 18470123 -121846642 + AT_rich Low_complexity Low_complexity 1 21 0 456 253 109 35 chr10 18470352 18470526 -121846239 + MIR SINE MIR 38 224 -38 2196 117 3 0 chr10 18470556 18470865 -121845900 + AluSx SINE Alu 1 310 -2 214 227 0 91 chr10 18470959 18471025 -121845740 + L2 LINE L2 3252 3311 -2 254 330 21 21 chr10 18471231 18471325 -121845440 - MIR SINE MIR -86 122 29 2310 106 0 0 chr10 18472534 18472837 -121843928 + AluSx SINE Alu 1 303 -9 439 139 47 0 chr10 18474450 18474536 -121842229 + MER53 DNA DNA 6 95 -94 1575 87 5 28 chr10 18474938 18475156 -121841609 - AluSx SINE Alu -3 307 95 708 66 0 0 chr10 18475211 18475302 -121841463 - AluSx SINE Alu -221 91 1 267 326 76 0 chr10 18475372 18475464 -121841301 + MIR SINE MIR 31 129 -133 1773 135 29 4 chr10 18476005 18476309 -121840456 - AluSx SINE Alu 0 311 1 2147 105 51 0 chr10 18476950 18477246 -121839519 + AluSq SINE Alu 1 311 -2 3021 28 0 3 chr10 18478918 18479279 -121837486 + L1PA4 LINE L1 5793 6152 -3 191 381 125 6 chr10 18479437 18479597 -121837168 + L3 LINE CR1 67 245 -1332 291 275 64 28 chr10 18479658 18479767 -121836998 - L2 LINE L2 -146 3126 3014 2568 61 0 0 chr10 18481989 18482300 -121834465 - AluY SINE Alu 0 311 1 2094 145 0 0 chr10 18482400 18482704 -121834061 - AluSx SINE Alu -8 304 1 246 232 10 20 chr10 18482756 18482855 -121833910 + (CATATA)n Simple_repeat Simple_repeat 1 98 0 570 151 0 0 chr10 18484727 18484833 -121831932 + CT-rich Low_complexity Low_complexity 1 106 0 1721 153 0 31 chr10 18484833 18485127 -121831638 - AluJo SINE Alu -7 305 21 737 272 62 25 chr10 18485746 18485989 -121830776 + MIR SINE MIR 2 253 -9 1317 155 12 0 chr10 18486323 18486575 -121830190 + L1MA4 LINE L1 5994 6248 -52 27 0 0 0 chr10 18486576 18486603 -121830162 + AT_rich Low_complexity Low_complexity 1 27 0 917 187 14 147 chr10 18487757 18488179 -121828586 + L1 LINE L1 4914 5279 -867 2374 43 0 0 chr10 18488617 18488923 -121827842 + AluY SINE Alu 2 307 0 1167 202 4 4 chr10 18488993 18489236 -121827529 - L1ME1 LINE L1 -269 5897 5655 838 178 43 12 chr10 18489225 18489493 -121827272 - L1ME1 LINE L1 -723 5443 5170 * 960 202 39 53 chr10 18489501 18489783 -121826982 + L1ME1 LINE L1 5885 6162 -4 303 258 374 22 chr10 18490799 18490981 -121825784 + MIR SINE MIR 16 261 -1 2288 71 0 0 chr10 18491541 18491863 -121824902 + AluY SINE Alu 1 322 0 297 75 0 0 chr10 18492525 18492565 -121824200 + (GA)n Simple_repeat Simple_repeat 1 40 0 181 325 134 75 chr10 18492645 18492973 -121823792 - L2 LINE L2 -348 2966 2659 1783 100 0 0 chr10 18492973 18493203 -121823562 - AluSg SINE Alu -31 279 50 181 325 134 75 chr10 18493203 18493348 -121823417 - L2 LINE L2 -655 2659 2524 2301 108 0 22 chr10 18493348 18493662 -121823103 + AluSx SINE Alu 1 307 -5 181 325 134 75 chr10 18493662 18493775 -121822990 - L2 LINE L2 -790 2524 2344 418 230 16 0 chr10 18493893 18493997 -121822768 + MER5A DNA MER1_type 4 109 -80 923 255 117 44 chr10 18494134 18494675 -121822090 - HAL1 LINE L1 -1293 1214 635 2065 96 36 23 chr10 18495122 18495424 -121821341 + AluSx SINE Alu 1 306 -6 2033 130 9 41 chr10 18497610 18497925 -121818840 - AluSg SINE Alu -4 306 2 271 336 67 8 chr10 18498028 18498147 -121818618 - L2 LINE L2 -5 3267 3142 466 194 229 21 chr10 18498586 18498730 -121818035 - L1MDb LINE L1 -4626 1780 1607 2168 113 3 0 chr10 18498730 18499032 -121817733 - AluSc SINE Alu -6 303 1 906 184 3 30 chr10 18499049 18499303 -121817462 - L1MDa LINE L1 -4933 1473 1228 422 110 35 179 chr10 18499298 18499443 -121817322 + L1MDa LINE L1 1457 1580 -4826 * 2338 217 104 25 chr10 18499499 18500551 -121816214 - L1MDb LINE L1 -5187 1219 8 517 170 107 27 chr10 18500797 18500909 -121815856 - L2 LINE L2 0 3313 3193 2026 106 11 7 chr10 18502538 18502860 -121813905 + AluSx SINE Alu 1 323 0 1088 147 5 5 chr10 18504950 18505148 -121811617 - L1MB3 LINE L1 0 6183 5986 1904 171 5 13 chr10 18505150 18505535 -121811230 - L1MB3 LINE L1 -295 5888 5507 22 80 0 0 chr10 18506210 18506260 -121810505 + AT_rich Low_complexity Low_complexity 1 50 0 4203 173 33 10 chr10 18507063 18507950 -121808815 - L1MB7 LINE L1 -24 6160 5254 207 100 0 0 chr10 18508568 18508598 -121808167 + (TG)n Simple_repeat Simple_repeat 1 30 0 294 68 23 0 chr10 18508629 18508673 -121808092 - MADE1 DNA Mariner 0 80 36 408 125 111 0 chr10 18508706 18508778 -121807987 - MADE1 DNA Mariner 0 80 1 22 80 0 0 chr10 18509260 18509310 -121807455 + AT_rich Low_complexity Low_complexity 1 50 0 537 305 176 0 chr10 18509357 18509544 -121807221 - MIR SINE MIR -28 234 15 24 77 0 0 chr10 18512095 18512147 -121804618 + AT_rich Low_complexity Low_complexity 1 52 0 2018 99 39 18 chr10 18512510 18512793 -121803972 + AluSx SINE Alu 1 289 -23 2203 126 0 0 chr10 18513806 18514107 -121802658 - AluSx SINE Alu -11 301 1 235 272 204 0 chr10 18514197 18514388 -121802377 + L1MC4a LINE L1 5730 5959 -1849 203 0 0 36 chr10 18516506 18516534 -121800231 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr10 18516659 18516682 -121800083 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 18517105 18517138 -121799627 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 18517833 18517854 -121798911 + AT_rich Low_complexity Low_complexity 1 21 0 2364 90 0 7 chr10 18518033 18518343 -121798422 - AluSg1 SINE Alu -1 308 1 192 40 0 0 chr10 18519820 18519845 -121796920 + (A)n Simple_repeat Simple_repeat 1 25 0 984 105 8 0 chr10 18520000 18520133 -121796632 + AluSq/x SINE Alu 3 136 -177 1464 158 0 0 chr10 18520133 18520354 -121796411 + AluSx SINE Alu 1 221 -91 19534 34 2 1 chr10 18520937 18524104 -121792661 + L1PA4 LINE L1 2983 6154 -1 206 289 0 0 chr10 18524684 18524729 -121792036 + L2 LINE L2 3136 3180 -92 499 266 70 0 chr10 18524917 18525045 -121791720 + MIR SINE MIR 55 191 -71 1763 166 3 0 chr10 18525594 18525877 -121790888 + AluJo SINE Alu 1 284 -28 30 0 0 0 chr10 18525877 18525907 -121790858 + AT_rich Low_complexity Low_complexity 1 30 0 2129 119 73 14 chr10 18526044 18526388 -121790377 + THE1B LTR MaLR 1 364 0 210 192 61 131 chr10 18526668 18526767 -121789998 - MIR SINE MIR -78 130 34 244 352 16 0 chr10 18528545 18528670 -121788095 - L1M4 LINE L1 -1988 4158 4032 279 0 0 0 chr10 18528684 18528715 -121788050 + (TG)n Simple_repeat Simple_repeat 2 32 0 1120 235 167 51 chr10 18528715 18529187 -121787578 + MER76 LTR ERV 162 688 0 448 259 0 0 chr10 18529340 18529452 -121787313 - HAL1b LINE L1 -659 689 578 246 328 86 0 chr10 18529458 18529586 -121787179 - HAL1b LINE L1 -1110 238 100 1002 267 73 50 chr10 18529592 18529948 -121786817 + L1ME1 LINE L1 1242 1588 -4808 892 133 0 15 chr10 18529948 18530083 -121786682 + FLAM_C SINE Alu 1 133 0 1002 267 73 50 chr10 18530083 18530566 -121786199 + L1ME1 LINE L1 1588 2100 -4296 1374 226 92 68 chr10 18530677 18531278 -121785487 + L1ME1 LINE L1 5605 6219 -16 2187 102 34 0 chr10 18531341 18531635 -121785130 - AluSg SINE Alu -6 304 1 307 167 30 0 chr10 18532696 18532762 -121784003 - L1MB7 LINE L1 0 6184 6117 1989 141 0 17 chr10 18534747 18535074 -121781691 - AluSx SINE Alu 0 322 1 300 27 0 0 chr10 18535286 18535323 -121781442 + (CA)n Simple_repeat Simple_repeat 2 38 0 2102 146 0 0 chr10 18535967 18536269 -121780496 + AluSx SINE Alu 2 303 -9 25 31 0 0 chr10 18536309 18536341 -121780424 + AT_rich Low_complexity Low_complexity 1 32 0 33 80 0 0 chr10 18537077 18537152 -121779613 + AT_rich Low_complexity Low_complexity 1 75 0 356 326 80 71 chr10 18537166 18537589 -121779176 + L3b LINE CR1 1149 1575 -8 2310 94 7 0 chr10 18537832 18538130 -121778635 + AluSq SINE Alu 2 301 -12 433 314 72 43 chr10 18538602 18538879 -121777886 + MLT1J LTR MaLR 25 309 -202 311 311 37 44 chr10 18538941 18539076 -121777689 + L2 LINE L2 3139 3272 0 856 289 73 74 chr10 18539415 18539980 -121776785 + MLT1K LTR MaLR 2 565 -23 247 265 165 9 chr10 18540439 18540614 -121776151 + L1ME LINE L1 5373 5567 -554 289 282 45 18 chr10 18540869 18540979 -121775786 + HAL1b LINE L1 1227 1339 -9 2186 108 0 3 chr10 18541002 18541288 -121775477 - AluSg SINE Alu -24 286 2 44 35 0 0 chr10 18541978 18542036 -121774729 + AT_rich Low_complexity Low_complexity 1 58 0 610 261 43 0 chr10 18542528 18542689 -121774076 + MIR SINE MIR 38 205 -57 6378 39 22 0 chr10 18542842 18543662 -121773103 + L1PA5 LINE L1 5342 6178 0 411 318 50 31 chr10 18543666 18543787 -121772978 + L1ME4a LINE L1 5530 5647 -474 2277 178 95 28 chr10 18543787 18544260 -121772505 + MLT1D LTR MaLR 1 505 0 411 318 50 31 chr10 18544260 18544497 -121772268 + L1ME4a LINE L1 5647 5895 -226 311 350 19 25 chr10 18544619 18544776 -121771989 + L2 LINE L2 3158 3313 0 22 0 0 0 chr10 18544848 18544870 -121771895 + AT_rich Low_complexity Low_complexity 1 22 0 610 269 32 76 chr10 18545051 18545300 -121771465 - L2 LINE L2 0 3313 3076 28 86 0 0 chr10 18545531 18545601 -121771164 + AT_rich Low_complexity Low_complexity 1 70 0 201 239 45 30 chr10 18545896 18545963 -121770802 - L3 LINE CR1 -64 1513 1446 247 183 164 67 chr10 18545995 18546099 -121770666 - L2 LINE L2 0 3313 3200 1006 280 69 25 chr10 18548385 18549003 -121767762 - L2 LINE L2 -85 3228 2579 581 299 108 20 chr10 18549670 18549921 -121766844 - L2 LINE L2 -705 2609 2337 6440 201 42 9 chr10 18550365 18550654 -121766111 + L1PA16 LINE L1 3879 4157 -2009 2103 96 4 0 chr10 18550654 18550926 -121765839 + AluSx SINE Alu 1 273 -39 6440 201 42 9 chr10 18550926 18552223 -121764542 + L1PA16 LINE L1 4157 5537 -629 2204 112 3 10 chr10 18552223 18552537 -121764228 + AluSq SINE Alu 1 312 -1 6440 201 42 9 chr10 18552537 18553189 -121763576 + L1PA16 LINE L1 5537 6166 0 766 271 105 90 chr10 18554216 18554750 -121762015 + LTR67 LTR ERVL 3 544 -13 4194 167 52 23 chr10 18555150 18555325 -121761440 + L1MB4 LINE L1 5215 5384 -796 2414 84 0 3 chr10 18555325 18555633 -121761132 + AluSq SINE Alu 3 309 -4 4194 167 52 23 chr10 18555633 18556399 -121760366 + L1MB4 LINE L1 5384 6180 0 206 271 157 0 chr10 18556525 18556595 -121760170 + MIR SINE MIR 2 82 -180 414 359 118 13 chr10 18557137 18557441 -121759324 - L2 LINE L2 -437 2877 2542 410 158 49 0 chr10 18558188 18558270 -121758495 + L2 LINE L2 3224 3309 -4 227 277 252 7 chr10 18558400 18558555 -121758210 - MIR SINE MIR 0 262 70 5197 133 34 15 chr10 18559943 18560815 -121755950 - MER4D LTR ERV1 0 903 15 242 291 209 12 chr10 18561185 18561271 -121755494 + MIR SINE MIR 44 146 -62 358 281 240 29 chr10 18563098 18563340 -121753425 - L3 LINE CR1 -7 1570 1278 1059 100 7 0 chr10 18563341 18563481 -121753284 + AluSq/x SINE Alu 1 141 -172 2112 108 7 0 chr10 18563486 18563774 -121752991 + AluSq SINE Alu 1 290 -23 338 294 168 28 chr10 18563812 18564026 -121752739 + MIR SINE MIR 14 257 -5 272 141 8 6 chr10 18564616 18564738 -121752027 + AluSp SINE Alu 121 322 0 605 200 212 0 chr10 18564860 18565030 -121751735 - MER3 DNA MER1_type -3 206 1 2103 128 17 0 chr10 18565363 18565660 -121751105 - AluSx SINE Alu -10 302 1 329 238 19 6 chr10 18566625 18566785 -121749980 + (TA)n Simple_repeat Simple_repeat 1 162 0 207 139 0 0 chr10 18567183 18567219 -121749546 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr10 18567459 18567480 -121749285 + AT_rich Low_complexity Low_complexity 1 21 0 1624 153 4 4 chr10 18568470 18568718 -121748047 - AluSx SINE Alu -64 248 1 403 271 0 0 chr10 18569615 18569700 -121747065 + AluJ/FLAM SINE Alu 7 91 -221 297 0 0 0 chr10 18569702 18569735 -121747030 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1140 133 6 6 chr10 18569742 18569915 -121746850 + FRAM SINE Alu 1 169 -7 477 76 0 0 chr10 18570418 18570484 -121746281 + (GA)n Simple_repeat Simple_repeat 1 66 0 420 296 174 10 chr10 18571028 18571224 -121745541 - MIR SINE MIR -7 255 28 1495 191 21 32 chr10 18571296 18571579 -121745186 - AluJb SINE Alu -22 290 11 22 0 0 0 chr10 18571835 18571857 -121744908 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 18571907 18571934 -121744831 + AT_rich Low_complexity Low_complexity 1 27 0 860 192 0 30 chr10 18572653 18572820 -121743945 - MER5A DNA MER1_type -26 163 2 1644 176 14 20 chr10 18574429 18574724 -121742041 + AluJb SINE Alu 4 296 -16 2191 81 7 0 chr10 18574852 18575123 -121741642 - AluSq SINE Alu -28 285 13 547 251 163 19 chr10 18575870 18576085 -121740680 + MIR SINE MIR 5 250 -12 2113 125 17 0 chr10 18576250 18576546 -121740219 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr10 18577139 18577162 -121739603 + AT_rich Low_complexity Low_complexity 1 23 0 2859 109 5 9 chr10 18577424 18577517 -121739248 + L1PA13 LINE L1 5734 5826 -337 2374 87 10 0 chr10 18577517 18577815 -121738950 + AluSx SINE Alu 1 301 -11 2859 109 5 9 chr10 18577815 18578153 -121738612 + L1PA13 LINE L1 5826 6163 0 273 57 0 0 chr10 18578323 18578358 -121738407 + (A)n Simple_repeat Simple_repeat 1 35 0 2350 103 79 0 chr10 18578992 18579321 -121737444 + MER1A DNA MER1_type 175 529 0 2386 104 0 0 chr10 18579496 18579805 -121736960 - AluSc SINE Alu 0 309 1 2805 159 11 0 chr10 18580380 18580838 -121735927 - L1PA16 LINE L1 -5 6161 5699 285 302 75 19 chr10 18581345 18581451 -121735314 + L2 LINE L2 3161 3272 0 241 184 92 40 chr10 18581473 18581549 -121735216 + MIR SINE MIR 175 254 -8 358 208 38 47 chr10 18581610 18581716 -121735049 - L2 LINE L2 -37 3276 3172 1583 152 42 8 chr10 18581749 18582012 -121734753 + AluJo SINE Alu 1 272 -40 243 0 0 0 chr10 18582018 18582045 -121734720 + (TC)n Simple_repeat Simple_repeat 2 28 0 2433 70 0 10 chr10 18582128 18582442 -121734323 + AluY SINE Alu 1 311 0 182 317 61 72 chr10 18583090 18583270 -121733495 + MIR SINE MIR 32 209 -53 1441 155 88 20 chr10 18584060 18584311 -121732454 - AluJb SINE Alu -22 290 23 890 56 0 0 chr10 18588477 18588584 -121728181 - AluSg/x SINE Alu -14 296 190 2218 120 0 0 chr10 18590528 18590820 -121725945 - AluSx SINE Alu -20 292 1 2018 128 4 0 chr10 18591673 18591987 -121724778 - AluSx SINE Alu 0 315 1 381 322 91 14 chr10 18592999 18593207 -121723558 - MIR SINE MIR -28 234 11 21 36 0 0 chr10 18595446 18595474 -121721291 + AT_rich Low_complexity Low_complexity 1 28 0 796 197 0 0 chr10 18595595 18595732 -121721033 - AluJo SINE Alu -16 296 160 864 155 27 7 chr10 18595793 18595941 -121720824 - AluJo SINE Alu -161 151 1 1842 187 0 0 chr10 18596555 18596854 -121719911 + AluSx SINE Alu 1 299 -13 292 238 0 0 chr10 18596918 18596981 -121719784 - MER94 DNA DNA -11 123 61 21 0 0 0 chr10 18597329 18597350 -121719415 + AT_rich Low_complexity Low_complexity 1 21 0 1849 129 0 0 chr10 18597470 18597725 -121719040 + AluSx SINE Alu 42 296 -16 1013 154 85 0 chr10 18597732 18597920 -121718845 + L1PA16 LINE L1 5958 6161 -5 857 179 20 0 chr10 18598534 18598685 -121718080 + MLT1A1 LTR MaLR 3 156 -209 1663 188 3 11 chr10 18598685 18599006 -121717759 + AluJb SINE Alu 1 319 0 1385 165 18 33 chr10 18599008 18599280 -121717485 + AluJo SINE Alu 21 288 -24 1246 155 24 9 chr10 18599280 18599493 -121717272 + MLT1A1 LTR MaLR 150 365 0 2021 169 15 40 chr10 18599609 18599931 -121716834 - MLT1B LTR MaLR 0 390 78 2194 131 3 0 chr10 18599931 18600229 -121716536 - AluSx SINE Alu -13 299 1 2021 169 15 40 chr10 18600229 18600303 -121716462 - MLT1B LTR MaLR -312 78 4 189 0 0 0 chr10 18600460 18600481 -121716284 + (T)n Simple_repeat Simple_repeat 1 21 0 261 229 135 94 chr10 18600702 18600798 -121715967 - L2 LINE L2 -36 3236 3137 311 289 40 83 chr10 18601172 18601449 -121715316 - L1M4b LINE L1 -5280 1579 1315 216 0 0 0 chr10 18602038 18602062 -121714703 + (TG)n Simple_repeat Simple_repeat 2 25 0 419 162 68 0 chr10 18602100 18602174 -121714591 + Tigger5 DNA MER2_type 1 79 -2244 235 264 0 0 chr10 18602183 18602236 -121714529 + Tigger5 DNA MER2_type 2271 2323 0 * 365 265 162 43 chr10 18602234 18602419 -121714346 - MLT1G1 LTR MaLR 0 567 361 609 267 75 41 chr10 18602496 18602788 -121713977 - MLT1G1 LTR MaLR -314 235 1 245 276 0 0 chr10 18602806 18602864 -121713901 + Tigger5 DNA MER2_type 21 78 -2245 2034 125 26 0 chr10 18602988 18603291 -121713474 + AluSq SINE Alu 1 311 -2 1021 192 44 125 chr10 18603419 18603804 -121712961 - MLT1A2 LTR MaLR -6 368 15 302 321 9 0 chr10 18603806 18603915 -121712850 + L1M4 LINE L1 3646 3755 -2391 1216 320 62 2 chr10 18603920 18604358 -121712407 - LTR16B LTR ERVL 0 464 1 424 304 77 66 chr10 18604418 18604518 -121712247 + L1M4 LINE L1 3796 3893 -2253 1535 181 0 87 chr10 18604518 18604850 -121711915 + AluJb SINE Alu 9 311 -1 424 304 77 66 chr10 18604850 18604873 -121711892 + L1M4 LINE L1 3893 3914 -2232 3858 122 16 26 chr10 18604873 18605447 -121711318 + MER61E LTR ERV1 2 569 0 424 304 77 66 chr10 18605447 18605553 -121711212 + L1M4 LINE L1 3914 4017 -2129 1613 172 4 15 chr10 18605553 18605826 -121710939 + AluSx SINE Alu 36 305 -7 424 304 77 66 chr10 18605826 18605948 -121710817 + L1M4 LINE L1 4017 4136 -2010 1617 210 0 23 chr10 18605948 18606248 -121710517 + AluJb SINE Alu 1 293 -19 424 304 77 66 chr10 18606248 18606265 -121710500 + L1M4 LINE L1 4136 4151 -1995 2309 100 3 3 chr10 18606265 18606566 -121710199 + AluY SINE Alu 1 301 -10 424 304 77 66 chr10 18606566 18606647 -121710118 + L1M4 LINE L1 4151 4254 -1892 509 108 0 12 chr10 18606699 18606782 -121709983 + (ATAAG)n Simple_repeat Simple_repeat 1 82 0 499 356 40 67 chr10 18608338 18608819 -121707946 - ERVL LTR ERVL -1466 4188 3695 2218 112 3 0 chr10 18608819 18609114 -121707651 - AluSx SINE Alu -16 296 1 499 356 40 67 chr10 18609114 18609644 -121707121 - ERVL LTR ERVL -1959 3695 3117 3786 321 43 17 chr10 18610097 18610596 -121706169 - ERVL LTR ERVL -1905 3091 2607 2142 134 3 0 chr10 18610596 18610894 -121705871 + AluSx SINE Alu 1 299 -13 3786 321 43 17 chr10 18610894 18611959 -121704806 - ERVL LTR ERVL -2389 2607 1421 1164 284 53 39 chr10 18612034 18612113 -121704652 - LTR16B LTR ERVL 0 464 388 2200 120 63 20 chr10 18612113 18612462 -121704303 + THE1B LTR MaLR 1 364 0 1164 284 53 39 chr10 18612462 18612815 -121703950 - LTR16B LTR ERVL -76 388 26 1732 140 125 74 chr10 18613112 18613519 -121703246 + MSTA LTR MaLR 1 428 0 546 244 27 76 chr10 18613565 18613790 -121702975 + L2 LINE L2 3100 3313 0 473 275 81 6 chr10 18613882 18614042 -121702723 - MIR SINE MIR -80 182 11 285 143 157 14 chr10 18614968 18615038 -121701727 - MADE1 DNA Mariner 0 80 1 198 150 0 0 chr10 18615252 18615292 -121701473 + (GA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 18615576 18615597 -121701168 + AT_rich Low_complexity Low_complexity 1 21 0 257 317 20 40 chr10 18615806 18615934 -121700831 + MIR SINE MIR 38 163 -63 2311 116 0 0 chr10 18616007 18616317 -121700448 + AluSx SINE Alu 2 311 -1 389 269 174 0 chr10 18616416 18616565 -121700200 - MER5A DNA MER1_type -1 188 14 2095 108 0 21 chr10 18616754 18617064 -121699701 + AluSx SINE Alu 1 304 0 1304 203 5 0 chr10 18617159 18617381 -121699384 + AluJo SINE Alu 1 223 -89 285 344 33 0 chr10 18617459 18617581 -121699184 + MIR SINE MIR 6 131 -131 485 200 105 0 chr10 18617717 18617822 -121698943 - FLAM_A SINE Alu -17 125 10 198 311 112 15 chr10 18617906 18618045 -121698720 + MIR SINE MIR 35 188 -58 1875 141 37 7 chr10 18618108 18618405 -121698360 - AluSq SINE Alu 0 313 8 1612 149 4 47 chr10 18618520 18618795 -121697970 - AluSx SINE Alu -49 263 1 246 339 51 0 chr10 18619185 18619303 -121697462 + MIR3 SINE MIR 40 163 -45 2487 153 10 0 chr10 18619349 18619747 -121697018 - MER57A LTR ERV1 -1 402 1 4283 102 29 2 chr10 18619772 18620388 -121696377 + LTR10E LTR ERV1 1 633 0 4855 81 17 4 chr10 18620861 18621876 -121694889 - MER11A LTR ERVK 0 1266 1 378 0 0 0 chr10 18621915 18621957 -121694808 + (T)n Simple_repeat Simple_repeat 1 42 0 685 152 0 0 chr10 18622801 18622900 -121693865 + AluSg/x SINE Alu 195 293 -16 1791 155 0 10 chr10 18623508 18623799 -121692966 + AluSx SINE Alu 1 288 -24 342 114 0 0 chr10 18623814 18623858 -121692907 + Alu SINE Alu 1 44 -258 1452 174 27 19 chr10 18623858 18624066 -121692699 - THE1-int LTR MaLR -592 988 776 1751 112 0 0 chr10 18624066 18624299 -121692466 - AluSc SINE Alu -48 261 29 1963 118 0 24 chr10 18624299 18624587 -121692178 + THE1-int LTR MaLR 708 988 -592 299 136 0 0 chr10 18624587 18624631 -121692134 - AluSc SINE Alu -256 44 1 1869 155 0 10 chr10 18624647 18624937 -121691828 - AluSx SINE Alu -25 287 1 1768 123 0 0 chr10 18627054 18627297 -121689468 + AluSx SINE Alu 43 285 -27 2175 126 0 7 chr10 18627900 18628209 -121688556 - AluSx SINE Alu -3 309 3 1831 162 3 30 chr10 18628567 18628870 -121687895 + AluJb SINE Alu 1 295 -17 532 172 98 8 chr10 18628872 18628994 -121687771 + FLAM_C SINE Alu 1 133 0 353 247 59 0 chr10 18629022 18629107 -121687658 - L2 LINE L2 -32 3281 3192 234 150 0 0 chr10 18629110 18629150 -121687615 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 370 199 15 23 chr10 18629180 18629311 -121687454 + (TA)n Simple_repeat Simple_repeat 1 130 0 242 109 0 0 chr10 18629336 18629382 -121687383 + LTR66 LTR ERVL 394 439 -171 2463 163 62 57 chr10 18630076 18630673 -121686092 - LTR18B LTR ERVL -14 600 1 261 0 0 0 chr10 18631041 18631070 -121685695 + (CA)n Simple_repeat Simple_repeat 1 29 0 245 95 0 24 chr10 18631330 18631372 -121685393 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 608 159 29 0 chr10 18631403 18631541 -121685224 + CT-rich Low_complexity Low_complexity 2 143 0 1595 193 7 17 chr10 18631564 18631860 -121684905 - AluJo SINE Alu -19 293 1 802 256 18 27 chr10 18632064 18632287 -121684478 - MER58A DNA MER1_type 0 224 4 1733 174 166 38 chr10 18633350 18633797 -121682968 - MLT1D LTR MaLR 0 505 2 1014 249 25 8 chr10 18634545 18634901 -121681864 + LTR10B LTR ERV1 157 505 0 545 320 98 52 chr10 18635670 18635880 -121680885 + L1ME LINE L1 2758 2957 -3189 2154 132 0 3 chr10 18635880 18636183 -121680582 + AluSx SINE Alu 1 302 -10 545 320 98 52 chr10 18636183 18636237 -121680528 + L1ME LINE L1 2957 3007 -3139 2035 204 69 55 chr10 18636237 18636834 -121679931 - MER77 LTR ERV1 0 605 1 545 320 98 52 chr10 18636834 18637243 -121679522 + L1ME LINE L1 3007 3463 -2683 342 289 50 16 chr10 18637316 18637437 -121679328 - LTR16C LTR ERVL -366 125 1 355 271 116 57 chr10 18637478 18637662 -121679103 + L1ME LINE L1 5413 5585 -536 186 43 0 0 chr10 18637662 18637685 -121679080 + (TG)n Simple_repeat Simple_repeat 2 24 0 355 271 116 57 chr10 18637685 18637888 -121678877 + L1ME LINE L1 5585 5822 -299 757 189 8 0 chr10 18637893 18638025 -121678740 + FLAM_C SINE Alu 1 133 -10 33 0 0 0 chr10 18638027 18638060 -121678705 + AT_rich Low_complexity Low_complexity 1 33 0 1655 128 201 17 chr10 18638366 18638724 -121678041 - MSTA LTR MaLR -4 424 1 267 76 24 11 chr10 18638878 18638934 -121677831 - MLT2B1 LTR ERVL 0 520 482 404 209 23 0 chr10 18638972 18639144 -121677621 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 1503 139 85 29 chr10 18639146 18639477 -121677288 + THE1C LTR MaLR 3 405 -21 10270 120 32 10 chr10 18639479 18641025 -121675740 + THE1C-int LTR MaLR 1 1580 0 1673 169 52 35 chr10 18641025 18641392 -121675373 + THE1C LTR MaLR 1 373 -2 190 185 46 0 chr10 18641416 18641481 -121675284 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 814 68 20 27 chr10 18641482 18641628 -121675137 + (GAAA)n Simple_repeat Simple_repeat 4 148 0 2053 223 4 24 chr10 18641629 18642091 -121674674 - MLT2B2 LTR ERVL -62 453 1 299 284 39 0 chr10 18642224 18642326 -121674439 + MER103 DNA DNA 8 113 -53 2279 127 19 101 chr10 18642790 18642879 -121673886 - MSTA LTR MaLR 0 428 333 1932 121 0 44 chr10 18642879 18643177 -121673588 - AluSx SINE Alu -27 285 1 2279 127 19 101 chr10 18643177 18643353 -121673412 - MSTA LTR MaLR -95 333 215 2302 100 7 0 chr10 18643353 18643652 -121673113 - AluSp SINE Alu -12 301 1 2279 127 19 101 chr10 18643652 18643851 -121672914 - MSTA LTR MaLR -213 215 1 681 248 55 39 chr10 18644091 18644345 -121672420 - LTR16B LTR ERVL -1 463 206 2795 112 109 69 chr10 18644725 18645204 -121671561 + MER4A LTR ERV1 17 528 -136 2197 99 0 3 chr10 18645204 18645496 -121671269 + AluY SINE Alu 1 291 -20 2795 112 109 69 chr10 18645496 18645639 -121671126 + MER4A LTR ERV1 528 664 0 2480 73 0 0 chr10 18647119 18647422 -121669343 - AluY SINE Alu -8 303 1 1948 121 60 0 chr10 18648382 18648663 -121668102 + AluSx SINE Alu 1 298 -14 304 338 62 31 chr10 18649024 18649184 -121667581 + MIR SINE MIR 8 172 -90 426 152 9 48 chr10 18649313 18649332 -121667433 - L1MA9 LINE L1 -24 6288 6270 1795 155 3 30 chr10 18649332 18649629 -121667136 + AluJb SINE Alu 1 289 -23 426 152 9 48 chr10 18649629 18649714 -121667051 - L1MA9 LINE L1 -42 6270 6188 2349 135 42 35 chr10 18649755 18649790 -121666975 - L1MA9 LINE L1 -114 6198 6165 180 111 0 0 chr10 18649790 18649817 -121666948 + (TG)n Simple_repeat Simple_repeat 2 28 0 2349 135 42 35 chr10 18649817 18650263 -121666502 - L1MA9 LINE L1 -147 6165 5714 1848 151 3 10 chr10 18650789 18651088 -121665677 - AluJo SINE Alu -15 297 1 198 150 33 17 chr10 18651322 18651382 -121665383 + (TG)n Simple_repeat Simple_repeat 2 62 0 2251 123 0 0 chr10 18651492 18651800 -121664965 - AluSx SINE Alu -4 308 1 2429 60 0 19 chr10 18652321 18652636 -121664129 - AluY SINE Alu -2 309 1 1960 137 32 0 chr10 18652941 18653225 -121663540 - AluSx SINE Alu -19 293 1 1792 175 21 0 chr10 18653228 18653519 -121663246 - AluJo SINE Alu -15 297 1 1829 166 0 44 chr10 18654003 18654323 -121662442 + AluJo SINE Alu 1 306 -6 1664 192 0 3 chr10 18654485 18654772 -121661993 - AluJo SINE Alu -26 286 1 2129 130 33 28 chr10 18655356 18655718 -121661047 - THE1B LTR MaLR 0 364 1 1914 159 6 13 chr10 18656522 18656954 -121659811 + AluJb SINE Alu 1 430 0 245 274 116 21 chr10 18657138 18657233 -121659532 + MIR SINE MIR 70 173 -89 1642 182 17 14 chr10 18657679 18657976 -121658789 + AluJo SINE Alu 1 298 -14 5889 71 5 0 chr10 18658139 18658942 -121657823 - L1PA7 LINE L1 0 6154 5348 253 211 19 0 chr10 18659604 18659656 -121657109 + MER94 DNA DNA 82 134 0 21 0 0 0 chr10 18659668 18659689 -121657076 + AT_rich Low_complexity Low_complexity 1 21 0 300 323 54 6 chr10 18659869 18660036 -121656729 - L1ME LINE L1 -451 5719 5545 1297 218 159 49 chr10 18661094 18663053 -121653712 + SATR1 Satellite Satellite 1 2173 -413 1944 116 0 11 chr10 18663055 18663332 -121653433 - AluSx SINE Alu -38 274 1 335 251 154 69 chr10 18663766 18663938 -121652827 + MLT1L LTR MaLR 11 167 -448 2173 114 3 0 chr10 18663938 18664235 -121652530 + AluSg SINE Alu 1 298 -12 504 0 0 0 chr10 18664236 18664292 -121652473 + (AATAG)n Simple_repeat Simple_repeat 1 56 0 335 251 154 69 chr10 18664292 18664364 -121652401 + MLT1L LTR MaLR 166 278 -337 246 254 34 0 chr10 18664717 18664776 -121651989 + MIR SINE MIR 188 248 -14 312 70 0 0 chr10 18665019 18665062 -121651703 + (CA)n Simple_repeat Simple_repeat 1 43 0 538 341 52 13 chr10 18665345 18665574 -121651191 + MIR SINE MIR 11 248 -14 339 130 0 0 chr10 18665581 18665635 -121651130 - AluSx SINE Alu -12 290 237 313 0 0 0 chr10 18665633 18665670 -121651095 - tRNA-Gly-GGA tRNA tRNA -38 37 1 * 1504 157 4 20 chr10 18665677 18665926 -121650839 - AluSx SINE Alu -67 245 1 1122 248 99 39 chr10 18666125 18666531 -121650234 + L1ME LINE L1 22 467 -5929 1951 146 31 34 chr10 18666531 18666887 -121649878 - THE1A LTR MaLR 0 355 1 1122 248 99 39 chr10 18666887 18666993 -121649772 + L1ME LINE L1 467 565 -5831 1526 196 8 43 chr10 18666997 18667349 -121649416 + MER6A DNA MER2_type 1 340 -265 2112 254 50 64 chr10 18667429 18667794 -121648971 + L1ME LINE L1 634 1003 -5393 1692 214 14 14 chr10 18667794 18668159 -121648606 + MLT1A1 LTR MaLR 1 365 0 2112 254 50 64 chr10 18668159 18669008 -121647757 + L1ME LINE L1 1003 1831 -4565 6302 90 5 1 chr10 18669008 18670206 -121646559 + L1PA8A LINE L1 4925 6126 -5 1588 149 6 98 chr10 18670276 18670592 -121646173 - AluJo SINE Alu -25 287 1 305 196 39 20 chr10 18670599 18670701 -121646064 + L1ME LINE L1 1841 1944 -4452 3076 258 94 4 chr10 18670703 18672017 -121644748 + L1ME LINE L1 2239 3671 -2544 1779 223 85 25 chr10 18672047 18672922 -121643843 + L1ME LINE L1 4746 5672 -563 207 0 0 0 chr10 18673040 18673063 -121643702 + (TTA)n Simple_repeat Simple_repeat 3 25 0 379 329 137 35 chr10 18673283 18673706 -121643059 - L3b LINE CR1 -10 1573 1108 1989 145 0 3 chr10 18674454 18674750 -121642015 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 18674756 18674778 -121641987 + AT_rich Low_complexity Low_complexity 1 22 0 642 197 40 88 chr10 18674972 18675088 -121641677 - L1ME2 LINE L1 -173 5991 5871 2147 120 0 3 chr10 18675088 18675388 -121641377 - AluSx SINE Alu -13 299 1 642 197 40 88 chr10 18675388 18675461 -121641304 - L1ME2 LINE L1 -293 5871 5843 2109 120 147 5 chr10 18675461 18675836 -121640929 + MSTA LTR MaLR 1 428 0 642 197 40 88 chr10 18675836 18675920 -121640845 - L1ME2 LINE L1 -321 5843 5757 365 261 18 18 chr10 18676489 18676523 -121640242 - MIR SINE MIR -78 184 151 2402 82 7 0 chr10 18676523 18676827 -121639938 - AluSp SINE Alu -7 306 1 365 261 18 18 chr10 18676827 18676903 -121639862 - MIR SINE MIR -110 152 74 497 258 145 6 chr10 18678171 18678330 -121638435 - MIR SINE MIR 0 262 82 378 358 37 0 chr10 18678340 18678474 -121638291 - L2 LINE L2 0 3313 3175 2363 128 22 112 chr10 18678583 18679139 -121637626 + LTR10A LTR ERV1 1 506 -103 615 357 105 5 chr10 18679558 18679967 -121636798 + L3 LINE CR1 877 1326 -251 1189 178 92 43 chr10 18679968 18680119 -121636646 + MLT1A1 LTR MaLR 1 143 -222 2145 115 0 10 chr10 18680119 18680423 -121636342 + AluSg SINE Alu 1 301 -9 1189 178 92 43 chr10 18680423 18680619 -121636146 + MLT1A1 LTR MaLR 143 365 0 298 314 32 70 chr10 18680717 18680902 -121635863 - L2 LINE L2 -67 3205 3028 218 273 0 61 chr10 18680897 18680963 -121635802 + L2 LINE L2 3251 3312 -1 * 2033 130 14 0 chr10 18681173 18681465 -121635300 + AluSg SINE Alu 3 298 -12 291 282 19 19 chr10 18681553 18681656 -121635109 - L2 LINE L2 -2 3311 3209 845 246 46 54 chr10 18682375 18682635 -121634130 - MIR SINE MIR 0 262 5 2135 140 5 42 chr10 18682752 18683130 -121633635 - THE1B LTR MaLR 0 364 1 217 250 60 60 chr10 18683464 18683564 -121633201 - L2 LINE L2 -46 3267 3168 249 333 63 55 chr10 18683910 18684316 -121632449 - L2 LINE L2 -192 3080 2659 600 251 70 104 chr10 18684412 18684827 -121631938 + MLT1H1 LTR MaLR 68 443 -112 1754 161 44 3 chr10 18684827 18685125 -121631640 + AluJo SINE Alu 1 310 -2 600 251 70 104 chr10 18685125 18685229 -121631536 + MLT1H1 LTR MaLR 443 549 -6 387 129 20 10 chr10 18685296 18685397 -121631368 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1900 163 3 3 chr10 18685404 18685735 -121631030 - MLT2C1 LTR ERVL -66 331 1 1844 79 7 76 chr10 18686202 18686479 -121630286 + AluY SINE Alu 46 303 -8 271 309 138 8 chr10 18687939 18688062 -121628703 - MIR SINE MIR -3 259 121 240 35 0 0 chr10 18688439 18688468 -121628297 + (CA)n Simple_repeat Simple_repeat 2 30 0 695 99 0 0 chr10 18688935 18689048 -121627717 + FLAM_A SINE Alu 25 137 0 325 331 47 24 chr10 18689750 18689877 -121626888 + MIR SINE MIR 17 146 -62 3699 138 28 6 chr10 18690048 18690686 -121626079 + L1MA7 LINE L1 5639 6290 -1 24 0 0 0 chr10 18691461 18691485 -121625280 + AT_rich Low_complexity Low_complexity 1 24 0 244 269 65 32 chr10 18691593 18691686 -121625079 + L2 LINE L2 3172 3267 -5 217 226 19 19 chr10 18693233 18693286 -121623479 - L3 LINE CR1 -1 1576 1524 257 284 196 0 chr10 18693917 18694019 -121622746 - L2 LINE L2 -1 3271 3150 1823 171 10 13 chr10 18694894 18695192 -121621573 - AluSx SINE Alu -15 297 1 1957 108 33 49 chr10 18695634 18695939 -121620826 - AluSg SINE Alu -10 300 1 309 262 0 0 chr10 18697077 18697138 -121619627 + polypurine Low_complexity Low_complexity 1 61 0 601 201 17 11 chr10 18697138 18697317 -121619448 + GA-rich Low_complexity Low_complexity 1 180 0 670 276 155 6 chr10 18698883 18699398 -121617367 + L1MEc LINE L1 1731 2322 -4074 617 119 10 0 chr10 18699402 18699503 -121617262 + (GAA)n Simple_repeat Simple_repeat 1 102 0 2797 235 62 23 chr10 18699706 18700022 -121616743 + L1MEc LINE L1 3250 3552 -2663 306 0 0 0 chr10 18700022 18700056 -121616709 + (CA)n Simple_repeat Simple_repeat 2 35 0 2797 235 62 23 chr10 18700056 18700743 -121616022 + L1MEc LINE L1 3552 4292 -1923 2322 94 0 0 chr10 18701217 18701514 -121615251 - AluSg SINE Alu -13 297 1 474 291 24 18 chr10 18702119 18702284 -121614481 - MER63A DNA MER1_type -6 204 39 311 343 48 14 chr10 18703397 18703543 -121613222 - MIR SINE MIR -111 151 1 1229 236 4 19 chr10 18703878 18704149 -121612616 + Tigger7 DNA MER2_type 1 267 -2220 521 184 10 0 chr10 18704147 18704245 -121612520 + Tigger7 DNA MER2_type 2489 2587 0 * 952 239 124 43 chr10 18705131 18705478 -121611287 - LTR33 LTR ERVL -120 401 27 2482 119 8 3 chr10 18705649 18706011 -121610754 - THE1B LTR MaLR 0 364 1 638 260 28 163 chr10 18706523 18706619 -121610146 - L2 LINE L2 -4 3309 3202 2069 98 28 63 chr10 18706619 18706937 -121609828 + AluSp SINE Alu 2 308 -5 638 260 28 163 chr10 18706937 18707417 -121609348 - L2 LINE L2 -111 3202 2811 413 272 0 29 chr10 18707434 18707537 -121609228 + MER5A DNA MER1_type 10 109 -80 566 223 40 17 chr10 18707577 18707752 -121609013 - L1MB8 LINE L1 -1 6177 5999 * 2451 227 64 34 chr10 18707743 18708498 -121608267 - L1MEc LINE L1 -3166 3049 2271 2225 66 38 10 chr10 18708498 18708787 -121607978 - AluY SINE Alu -14 297 1 2451 227 64 34 chr10 18708787 18709204 -121607561 - L1MEc LINE L1 -3944 2271 1868 2088 293 62 6 chr10 18709307 18710006 -121606759 - L2 LINE L2 -508 2806 2069 2039 139 7 7 chr10 18710006 18710316 -121606449 + AluSx SINE Alu 1 310 -2 192 299 15 15 chr10 18710457 18710524 -121606241 + MER5A DNA MER1_type 122 188 -1 287 349 108 0 chr10 18710949 18711115 -121605650 + MIR SINE MIR 53 236 -26 413 139 0 38 chr10 18711215 18711294 -121605471 - MLT1F LTR MaLR -4 538 463 * 537 259 35 0 chr10 18711291 18711434 -121605331 - MLT1F LTR MaLR -369 173 26 3533 142 52 19 chr10 18711435 18712083 -121604682 + LTR51 LTR ERV1 1 670 -1 387 0 0 0 chr10 18712576 18712619 -121604146 + (CA)n Simple_repeat Simple_repeat 1 43 0 228 345 149 0 chr10 18712630 18712717 -121604048 + MIR3 SINE MIR 55 154 -54 1870 117 32 32 chr10 18712937 18713272 -121603493 + AluSx SINE Alu 2 336 0 958 133 13 13 chr10 18713455 18713606 -121603159 - FRAM SINE Alu -26 150 1 245 286 0 14 chr10 18714738 18714808 -121601957 + MLT1J2 LTR MaLR 263 331 -119 2144 159 45 23 chr10 18715466 18715906 -121600859 + LTR7 LTR ERV1 1 450 0 385 246 51 34 chr10 18715956 18716074 -121600691 - L2 LINE L2 0 3272 3153 2375 88 0 3 chr10 18717349 18717656 -121599109 + AluY SINE Alu 1 306 -5 207 244 0 0 chr10 18717771 18717849 -121598916 + GA-rich Low_complexity Low_complexity 1 78 0 547 89 89 0 chr10 18717931 18718021 -121598744 + MER4A LTR ERV1 1 98 -566 1570 128 174 76 chr10 18718021 18718389 -121598376 + MER4A LTR ERV1 261 664 0 2724 97 146 36 chr10 18718392 18718947 -121597818 + MER4A-int LTR ERV1 1 616 -5982 308 177 0 38 chr10 18718954 18719033 -121597732 + MER4A-int LTR ERV1 751 826 -5772 232 156 0 44 chr10 18719056 18719101 -121597664 + LTR49 LTR ERV1 271 313 -282 920 127 17 17 chr10 18719121 18719294 -121597471 + MER4A-int LTR ERV1 993 1165 -5433 336 254 0 0 chr10 18719294 18719412 -121597353 + (TG)n Simple_repeat Simple_repeat 1 118 0 593 103 43 141 chr10 18719412 18719651 -121597114 + MER4A-int LTR ERV1 566 749 -4266 3921 85 72 8 chr10 18719677 18720327 -121596438 + MER4A-int LTR ERV1 1804 2495 -4103 1286 163 75 0 chr10 18720327 18720566 -121596199 - LTR8 LTR ERV1 -434 257 1 1087 57 6 6 chr10 18720566 18720743 -121596022 + MER4A-int LTR ERV1 2737 2913 -3685 14313 101 66 17 chr10 18720762 18720798 -121595967 + MER4A-int LTR ERV1 3964 3997 -2601 1974 132 0 0 chr10 18720798 18721070 -121595695 - AluSq SINE Alu -41 272 1 14313 101 66 17 chr10 18721070 18723506 -121593259 + MER4A-int LTR ERV1 3997 6563 -35 215 31 31 0 chr10 18723506 18723538 -121593227 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 14313 101 66 17 chr10 18723538 18723571 -121593194 + MER4A-int LTR ERV1 6563 6593 -5 489 88 99 11 chr10 18723582 18723673 -121593092 + MER4A LTR ERV1 1 99 -565 533 132 6 170 chr10 18723724 18723883 -121592882 + MER4A LTR ERV1 372 504 -160 1617 128 75 17 chr10 18723883 18724259 -121592506 - LTR7 LTR ERV1 0 450 1 1070 137 6 0 chr10 18724259 18724422 -121592343 + MER4B LTR ERV1 445 608 -2 1549 167 8 0 chr10 18724425 18724677 -121592088 + AluJo SINE Alu 21 274 -38 285 29 0 0 chr10 18724680 18724714 -121592051 + (CA)n Simple_repeat Simple_repeat 1 34 0 1842 81 12 142 chr10 18724714 18725058 -121591707 + AluSg SINE Alu 1 299 -11 1837 155 59 34 chr10 18725111 18725499 -121591266 - MER48 LTR ERV1 0 398 1 2027 96 3 51 chr10 18725758 18726071 -121590694 - AluSp SINE Alu -15 298 1 313 217 76 11 chr10 18726304 18726396 -121590369 - MLT1I LTR MaLR -7 402 305 488 115 0 0 chr10 18726453 18726531 -121590234 + MLT2B2 LTR ERVL 5 82 -433 3132 133 41 87 chr10 18727138 18727862 -121588903 + LTR8 LTR ERV1 1 691 0 1021 166 6 0 chr10 18728340 18728497 -121588268 - FRAM SINE Alu -25 151 1 1625 157 32 11 chr10 18728506 18728787 -121587978 - AluJo SINE Alu -25 287 1 2333 91 3 0 chr10 18729366 18729662 -121587103 - AluSp SINE Alu -16 297 1 2284 64 7 7 chr10 18729749 18730066 -121586699 - AluY SINE Alu 0 311 1 405 304 32 45 chr10 18730245 18730465 -121586300 + MIR SINE MIR 32 248 -14 362 332 109 34 chr10 18730535 18730884 -121585881 - L2 LINE L2 -1 3312 2938 872 186 6 0 chr10 18730885 18731041 -121585724 + FRAM SINE Alu 1 157 -19 237 260 55 0 chr10 18731147 18731220 -121585545 - L2 LINE L2 -650 2664 2588 366 225 47 87 chr10 18731230 18731375 -121585390 - MLT1I LTR MaLR -7 416 303 3136 136 37 29 chr10 18731375 18731891 -121584874 + MLT2B1 LTR ERVL 1 520 0 366 225 47 87 chr10 18731891 18731927 -121584838 - MLT1I LTR MaLR -120 303 267 235 264 11 46 chr10 18732022 18732109 -121584656 - MLT1I LTR MaLR -284 125 42 310 320 0 0 chr10 18732162 18732259 -121584506 - L2 LINE L2 -756 2558 2462 1838 143 122 36 chr10 18733476 18733811 -121582954 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr10 18734047 18734081 -121582684 + AT_rich Low_complexity Low_complexity 1 34 0 2163 105 28 0 chr10 18734107 18734392 -121582373 + AluSp SINE Alu 2 294 -19 217 332 109 43 chr10 18734700 18734911 -121581854 + L2 LINE L2 1063 1287 -2027 2423 84 0 3 chr10 18735731 18736040 -121580725 - AluSq SINE Alu -5 308 1 2370 100 0 0 chr10 18736550 18736850 -121579915 + AluSx SINE Alu 1 300 -12 305 309 67 47 chr10 18737683 18737832 -121578933 - L2 LINE L2 -29 3243 3092 1296 167 149 32 chr10 18738109 18738140 -121578625 - LTR37A LTR ERV1 -1 425 399 1893 160 7 10 chr10 18738140 18738446 -121578319 + AluJb SINE Alu 1 305 -7 1296 167 149 32 chr10 18738446 18738756 -121578009 - LTR37A LTR ERV1 -27 399 44 2066 125 10 0 chr10 18738756 18739045 -121577720 + AluSx SINE Alu 1 292 -20 14100 41 10 2 chr10 18739047 18741440 -121575325 + L1PA5 LINE L1 3748 6150 -4 848 100 0 0 chr10 18742013 18742123 -121574642 + HY1 scRNA scRNA 1 110 -2 2207 113 3 10 chr10 18742286 18742595 -121574170 + AluSx SINE Alu 1 307 -5 480 307 29 49 chr10 18742617 18742822 -121573943 - MIR SINE MIR -16 246 46 1334 221 28 36 chr10 18742848 18742937 -121573828 + LTR37A LTR ERV1 5 93 -333 1853 205 94 13 chr10 18742937 18743385 -121573380 + MER31A LTR ERV1 1 484 -1 1334 221 28 36 chr10 18743385 18743653 -121573112 + LTR37A LTR ERV1 93 359 -67 1197 189 25 8 chr10 18743653 18743891 -121572874 + AluJo SINE Alu 62 303 -9 317 153 0 14 chr10 18743893 18743965 -121572800 + LTR37A LTR ERV1 356 426 0 467 305 52 66 chr10 18744012 18744107 -121572658 + MIR SINE MIR 11 106 -156 2273 107 0 10 chr10 18744107 18744416 -121572349 + AluY SINE Alu 1 306 -5 467 305 52 66 chr10 18744416 18744533 -121572232 + MIR SINE MIR 106 220 -42 1627 235 80 45 chr10 18744586 18745123 -121571642 + MER34B LTR ERV1 6 561 -4 302 287 222 9 chr10 18745175 18745283 -121571482 - MER5A DNA MER1_type 0 189 59 2113 127 10 0 chr10 18745298 18745598 -121571167 - AluSp SINE Alu -10 303 1 2705 203 17 11 chr10 18745664 18746197 -121570568 + LTR31 LTR ERV1 69 604 -15 197 328 17 0 chr10 18746205 18746263 -121570502 - MER5A DNA MER1_type -122 67 9 2046 105 25 0 chr10 18746889 18747174 -121569591 + AluSx SINE Alu 1 292 -20 204 40 0 0 chr10 18747178 18747203 -121569562 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr10 18747243 18747279 -121569486 + AT_rich Low_complexity Low_complexity 1 36 0 2334 108 0 0 chr10 18748217 18748514 -121568251 - AluSx SINE Alu -15 297 1 244 338 14 0 chr10 18748691 18748765 -121568000 + Tigger8 DNA MER2_type 573 647 -19 722 113 0 182 chr10 18748854 18749013 -121567752 + AluJo SINE Alu 2 131 -171 242 256 0 64 chr10 18749014 18749059 -121567706 + AluJo SINE Alu 201 241 -61 1992 107 7 0 chr10 18749059 18749331 -121567434 + AluSp SINE Alu 34 307 -6 242 256 0 64 chr10 18749331 18749363 -121567402 + AluJo SINE Alu 241 273 -29 273 29 0 0 chr10 18750604 18750638 -121566127 + (TG)n Simple_repeat Simple_repeat 1 34 0 2138 84 15 0 chr10 18750641 18750914 -121565851 - AluSq SINE Alu -36 277 1 938 243 24 0 chr10 18752161 18752416 -121564349 + L1MA4 LINE L1 6039 6299 -1 220 276 0 0 chr10 18752678 18752736 -121564029 + T-rich Low_complexity Low_complexity 1 58 0 181 288 62 0 chr10 18753273 18753353 -121563412 - MIR SINE MIR -53 209 125 1087 324 112 18 chr10 18753370 18753926 -121562839 + L2 LINE L2 873 1480 -1834 1457 216 70 35 chr10 18753926 18754297 -121562468 - MLT1B LTR MaLR 0 390 7 211 320 181 26 chr10 18754303 18754612 -121562153 + L2 LINE L2 1476 1832 -1482 230 191 146 91 chr10 18754645 18754755 -121562010 + MER39 LTR ERV1 4 119 -588 * 789 222 128 49 chr10 18754738 18755168 -121561597 + LTR48B LTR ERV1 148 782 -5 194 217 22 0 chr10 18755174 18755220 -121561545 + L2 LINE L2 1881 1927 -1387 2497 82 0 0 chr10 18755234 18755538 -121561227 - AluSg SINE Alu -6 304 1 792 283 41 8 chr10 18756193 18756437 -121560328 + MER34 LTR ERV1 34 285 -257 317 177 16 0 chr10 18756495 18756557 -121560208 + LTR52-int LTR ERVL 693 755 -4588 2072 130 0 16 chr10 18756781 18757089 -121559676 - AluSx SINE Alu -8 304 2 402 78 0 0 chr10 18757090 18757141 -121559624 - L1M4 LINE L1 -577 5607 5557 285 241 28 74 chr10 18757286 18757394 -121559371 + LTR52-int LTR ERVL 503 605 -2951 2437 87 3 0 chr10 18757717 18758015 -121558750 - AluSx SINE Alu -13 299 1 1870 147 0 51 chr10 18758018 18758332 -121558433 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18758575 18758923 -121557842 - L1PA13 LINE L1 -26 6137 5789 2400 70 10 0 chr10 18758937 18759235 -121557530 - AluSp SINE Alu -12 301 1 2299 109 7 0 chr10 18759721 18760024 -121556741 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18761003 18761049 -121555716 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18761220 18761344 -121555421 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18761431 18761720 -121555045 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18761734 18761785 -121554980 - L3b LINE CR1 -17 1566 1515 1889 126 0 0 chr10 18761822 18762084 -121554681 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18762250 18762320 -121554445 + L2 LINE L2 3194 3267 -5 1451 225 38 67 chr10 18763326 18763781 -121552984 - L1MC5 LINE L1 -51 7910 7474 2423 69 0 3 chr10 18763781 18764085 -121552680 - AluY SINE Alu -8 303 1 1451 225 38 67 chr10 18764085 18764212 -121552553 - L1MC5 LINE L1 -487 7474 7345 26 30 0 0 chr10 18764237 18764270 -121552495 + AT_rich Low_complexity Low_complexity 1 33 0 1448 218 62 107 chr10 18764318 18765026 -121551739 - L1MC5 LINE L1 -632 7329 6658 2146 129 0 3 chr10 18765026 18765328 -121551437 - AluSx SINE Alu -11 301 1 1448 218 62 107 chr10 18765328 18765419 -121551346 - L1MC5 LINE L1 -1303 6658 6564 895 136 0 0 chr10 18765554 18765672 -121551093 + FLAM_C SINE Alu 1 118 -15 554 282 69 69 chr10 18766044 18766202 -121550563 - HAL1b LINE L1 -683 665 508 2267 97 3 3 chr10 18766202 18766513 -121550252 - AluSq SINE Alu -2 311 1 554 282 69 69 chr10 18766513 18766804 -121549961 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18766941 18767072 -121549693 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18767082 18767231 -121549534 + T-rich Low_complexity Low_complexity 4 153 0 1598 188 0 34 chr10 18767281 18767579 -121549186 - AluJo SINE Alu -4 308 21 37 0 0 0 chr10 18767818 18767855 -121548910 + GC_rich Low_complexity Low_complexity 1 37 0 360 249 150 98 chr10 18767884 18767907 -121548858 + L1M2 LINE L1 657 677 -6172 198 0 0 0 chr10 18767907 18767929 -121548836 + (CAG)n Simple_repeat Simple_repeat 3 24 0 360 249 150 98 chr10 18767929 18768042 -121548723 + L1M2 LINE L1 677 783 -6066 207 114 0 0 chr10 18768042 18768077 -121548688 + (CCG)n Simple_repeat Simple_repeat 2 36 0 360 249 150 98 chr10 18768077 18768345 -121548420 + L1M2 LINE L1 783 1083 -5766 719 239 27 63 chr10 18768673 18768895 -121547870 + MER58A DNA MER1_type 2 215 -9 530 274 138 19 chr10 18768905 18769238 -121547527 + MER57A LTR ERV1 9 403 0 1369 217 11 49 chr10 18769239 18769607 -121547158 + MLT1A1 LTR MaLR 1 354 -11 248 188 0 47 chr10 18769803 18769867 -121546898 + L1MC5 LINE L1 7856 7916 -45 180 109 43 22 chr10 18771533 18771579 -121545186 + (TA)n Simple_repeat Simple_repeat 2 48 0 487 126 52 29 chr10 18771623 18771797 -121544968 + (TA)n Simple_repeat Simple_repeat 1 178 0 287 144 61 15 chr10 18771839 18771971 -121544794 + (TA)n Simple_repeat Simple_repeat 1 138 0 186 200 13 27 chr10 18772078 18772153 -121544612 + (TA)n Simple_repeat Simple_repeat 1 74 0 2850 16 0 0 chr10 18772463 18772773 -121543992 - AluYa5 SINE Alu -1 310 1 1725 166 0 34 chr10 18772910 18773226 -121543539 + AluJo SINE Alu 1 306 0 1568 169 19 51 chr10 18773563 18773877 -121542888 + AluJo SINE Alu 5 308 -4 2110 128 0 7 chr10 18774978 18775274 -121541491 - AluSx SINE Alu -18 294 1 2272 93 3 0 chr10 18775301 18775592 -121541173 - AluSg SINE Alu -18 292 1 226 284 53 0 chr10 18775680 18775775 -121540990 + L1M4 LINE L1 3804 3903 -2243 835 176 8 0 chr10 18775825 18775956 -121540809 + FLAM_A SINE Alu 1 132 -1 663 301 101 39 chr10 18776691 18777076 -121539689 + L2 LINE L2 2905 3313 0 364 309 101 14 chr10 18777455 18777594 -121539171 + MIR SINE MIR 21 171 -91 409 276 25 111 chr10 18777597 18777624 -121539141 + L2 LINE L2 2380 2408 -906 3628 119 33 4 chr10 18777624 18778135 -121538630 + MER1A DNA MER1_type 1 526 -1 409 276 25 111 chr10 18778135 18778469 -121538296 + L2 LINE L2 2408 2710 -604 337 246 24 157 chr10 18778777 18779025 -121537740 + L2 LINE L2 2839 3053 -219 289 202 138 32 chr10 18779639 18779760 -121537005 + MIR3 SINE MIR 15 154 -62 2007 117 0 17 chr10 18780053 18780343 -121536422 + AluSx SINE Alu 19 303 -9 21 36 0 0 chr10 18780437 18780465 -121536300 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr10 18781056 18781084 -121535681 + AT_rich Low_complexity Low_complexity 1 28 0 2352 79 26 0 chr10 18781105 18781408 -121535357 - AluY SINE Alu 0 311 1 231 229 92 76 chr10 18782186 18782317 -121534448 - MIR3 SINE MIR -52 156 24 207 256 0 33 chr10 18783050 18783140 -121533625 + T-rich Low_complexity Low_complexity 4 90 0 349 267 30 10 chr10 18783194 18783295 -121533470 + L2 LINE L2 3211 3313 0 2732 123 43 54 chr10 18783385 18783627 -121533138 + MER39B LTR ERV1 1 244 -409 1429 201 60 7 chr10 18783627 18783911 -121532854 + AluJo SINE Alu 1 299 -13 2732 123 43 54 chr10 18783911 18783956 -121532809 + MER39B LTR ERV1 244 288 -365 1993 138 39 30 chr10 18783956 18784317 -121532448 + THE1B LTR MaLR 1 364 0 2732 123 43 54 chr10 18784317 18784565 -121532200 + MER39B LTR ERV1 288 531 -122 1780 68 5 0 chr10 18784592 18784811 -121531954 + AluY SINE Alu 1 220 -91 23 0 0 0 chr10 18784949 18784972 -121531793 + AT_rich Low_complexity Low_complexity 1 23 0 489 140 43 0 chr10 18784977 18785070 -121531695 + LTR49 LTR ERV1 494 590 -5 782 185 0 0 chr10 18785309 18785439 -121531326 + FLAM_C SINE Alu 1 130 -3 1898 147 31 10 chr10 18786385 18786678 -121530087 + AluJo SINE Alu 14 312 0 1125 208 64 71 chr10 18786682 18787130 -121529635 + MER66A LTR ERV1 97 478 0 289 284 194 26 chr10 18787203 18787358 -121529407 + MIR SINE MIR 81 261 -1 1786 178 65 11 chr10 18787429 18787784 -121528981 + THE1C LTR MaLR 1 374 -1 2105 105 0 68 chr10 18789213 18789536 -121527229 - AluSx SINE Alu -11 301 1 265 389 41 8 chr10 18789601 18789966 -121526799 - L1ME LINE L1 -288 5882 5506 234 0 0 0 chr10 18790116 18790142 -121526623 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 395 295 135 25 chr10 18790336 18790855 -121525910 - L1ME LINE L1 -1053 5093 4518 457 294 165 29 chr10 18790932 18791272 -121525493 - L1ME LINE L1 -1714 4432 4047 619 256 0 12 chr10 18791296 18791456 -121525309 + MLT1J LTR MaLR 29 186 -325 375 307 42 18 chr10 18791598 18791764 -121525001 + MLT1J LTR MaLR 234 403 -108 375 275 110 28 chr10 18791803 18792021 -121524744 - HAL1 LINE L1 -873 1634 1399 731 188 0 54 chr10 18792680 18792829 -121523936 + FLAM_C SINE Alu 1 141 -2 2269 116 0 0 chr10 18794654 18794948 -121521817 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr10 18795002 18795024 -121521741 + AT_rich Low_complexity Low_complexity 1 22 0 1346 260 86 19 chr10 18795030 18795291 -121521474 + L1ME3A LINE L1 5590 5832 -338 315 0 0 0 chr10 18795291 18795326 -121521439 + (CA)n Simple_repeat Simple_repeat 2 36 0 1346 260 86 19 chr10 18795326 18795599 -121521166 + L1ME3A LINE L1 5832 6160 -10 377 285 69 15 chr10 18795900 18796030 -121520735 + MIR SINE MIR 52 188 -74 548 235 29 142 chr10 18796381 18796461 -121520304 - MIR SINE MIR -6 256 169 2342 120 42 26 chr10 18796461 18796887 -121519878 - L1PB4 LINE L1 -13 6143 5711 548 235 29 142 chr10 18796887 18797087 -121519678 - MIR SINE MIR -93 169 8 255 31 0 0 chr10 18797113 18797145 -121519620 + (TG)n Simple_repeat Simple_repeat 2 33 0 1918 163 0 3 chr10 18797287 18797588 -121519177 + AluSx SINE Alu 1 300 -12 417 289 73 70 chr10 18798728 18799084 -121517681 - L1ME LINE L1 -2985 3161 2805 1868 117 10 33 chr10 18799111 18799445 -121517320 + AluY SINE Alu 1 311 0 1806 144 54 4 chr10 18799930 18800207 -121516558 + AluSx SINE Alu 1 291 -21 26 30 0 0 chr10 18800207 18800240 -121516525 + AT_rich Low_complexity Low_complexity 1 33 0 3442 74 18 10 chr10 18800514 18801029 -121515736 - L1PA11 LINE L1 -348 5826 5308 1913 125 38 3 chr10 18801030 18801317 -121515448 - AluSx SINE Alu -15 297 1 197 395 53 0 chr10 18801336 18801450 -121515315 - L2 LINE L2 -508 2806 2687 247 238 16 0 chr10 18801696 18801759 -121515006 + (TA)n Simple_repeat Simple_repeat 1 64 0 2201 98 40 0 chr10 18801890 18802186 -121514579 + AluSg SINE Alu 1 308 -2 222 328 66 59 chr10 18802808 18803263 -121513502 - L2 LINE L2 -823 2491 2034 208 259 52 0 chr10 18805579 18805637 -121511128 + L2 LINE L2 3148 3208 -64 2264 102 0 0 chr10 18806421 18806716 -121510049 + AluSg SINE Alu 1 295 -15 1586 208 35 37 chr10 18806901 18806979 -121509786 + L1M4 LINE L1 4885 4962 -1216 1834 116 25 7 chr10 18806979 18807283 -121509482 + AluSx SINE Alu 1 309 0 1586 208 35 37 chr10 18807283 18807795 -121508970 + L1M4 LINE L1 4962 5469 -709 827 453 36 22 chr10 18808082 18808360 -121508405 + AluSx SINE Alu 1 282 -30 6348 40 2 0 chr10 18808372 18809168 -121507597 - L1PA3 LINE L1 -2 6153 5356 * 7573 31 0 4 chr10 18809155 18810134 -121506631 + L1PA3 LINE L1 4386 5360 -786 244 342 101 9 chr10 18810192 18810420 -121506345 + L2 LINE L2 2399 2647 -667 960 190 13 0 chr10 18810461 18810619 -121506146 - AluJb SINE Alu -26 286 127 1761 103 0 9 chr10 18810644 18810876 -121505889 + AluSg/x SINE Alu 68 297 -15 476 313 27 14 chr10 18810925 18811072 -121505693 + L2 LINE L2 3116 3264 -8 265 217 0 43 chr10 18811149 18811218 -121505547 - MER96B DNA MER1_type? -31 386 321 571 122 0 0 chr10 18811221 18811311 -121505454 + MLT2B1 LTR ERVL 5 94 -421 657 150 18 9 chr10 18811318 18811431 -121505334 - AluJb SINE Alu -25 287 174 1578 185 76 47 chr10 18811444 18811850 -121504915 + MLT2B1 LTR ERVL 100 517 -3 252 154 0 0 chr10 18811850 18811898 -121504867 - MER96B DNA MER1_type? -101 316 269 949 148 6 60 chr10 18811898 18812080 -121504685 + AluJo SINE Alu 122 293 -19 819 137 4 124 chr10 18812087 18812252 -121504513 - MER96B DNA MER1_type? -164 253 123 1935 156 0 3 chr10 18812252 18812540 -121504225 + AluJb SINE Alu 1 287 -25 819 137 4 124 chr10 18812540 18812608 -121504157 - MER96B DNA MER1_type? -294 123 48 596 243 75 45 chr10 18812644 18812833 -121503932 + MER34B LTR ERV1 270 471 -94 1880 157 10 0 chr10 18812833 18813132 -121503633 - AluSg SINE Alu -8 302 1 596 243 75 45 chr10 18813132 18813210 -121503555 + MER34B LTR ERV1 471 545 -20 467 293 52 65 chr10 18813521 18813665 -121503100 - MIR SINE MIR -13 249 108 780 144 0 182 chr10 18813665 18813901 -121502864 + 7SK RNA RNA 1 193 0 467 293 52 65 chr10 18813901 18813985 -121502780 - MIR SINE MIR -154 108 24 187 170 19 19 chr10 18814027 18814080 -121502685 + CT-rich Low_complexity Low_complexity 3 55 0 479 178 149 0 chr10 18814093 18814200 -121502565 - L2 LINE L2 -1 3312 3190 913 219 28 36 chr10 18814203 18814454 -121502311 + LTR8 LTR ERV1 1 249 -442 878 244 23 99 chr10 18814675 18815150 -121501615 + L1ME2 LINE L1 5649 6087 -77 239 278 68 98 chr10 18815221 18815426 -121501339 + MIR SINE MIR 6 204 -58 296 325 0 33 chr10 18815801 18815921 -121500844 - L1ME LINE L1 -506 5656 5541 233 324 74 6 chr10 18815944 18816120 -121500645 - L1ME LINE L1 -2337 5471 5284 243 292 64 27 chr10 18816290 18816509 -121500256 - L1ME LINE L1 -1037 5109 4883 2043 150 0 0 chr10 18817510 18817810 -121498955 - AluJb SINE Alu -12 300 1 273 212 76 0 chr10 18819103 18819169 -121497596 + Tigger7 DNA MER2_type 2421 2491 0 234 222 19 0 chr10 18821030 18821084 -121495681 + L1ME3A LINE L1 6095 6149 -21 1656 159 18 25 chr10 18821113 18821389 -121495376 + AluJo SINE Alu 1 274 -38 674 146 28 28 chr10 18821392 18821570 -121495195 + GA-rich Low_complexity Low_complexity 1 178 0 201 138 0 0 chr10 18821570 18821599 -121495166 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 219 139 0 0 chr10 18822507 18822543 -121494222 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr10 18822613 18822641 -121494124 + AT_rich Low_complexity Low_complexity 1 28 0 1995 124 41 0 chr10 18822685 18822975 -121493790 - AluSx SINE Alu -9 303 2 22 35 0 0 chr10 18823084 18823113 -121493652 + AT_rich Low_complexity Low_complexity 1 29 0 300 27 0 0 chr10 18824000 18824037 -121492728 + (CA)n Simple_repeat Simple_repeat 2 38 0 220 208 42 28 chr10 18824066 18824138 -121492627 + (TATG)n Simple_repeat Simple_repeat 3 75 0 402 121 96 0 chr10 18824145 18824302 -121492463 + (TA)n Simple_repeat Simple_repeat 1 172 0 217 196 52 12 chr10 18824333 18824506 -121492259 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 171 26 53 chr10 18824506 18824582 -121492183 + (TTATA)n Simple_repeat Simple_repeat 5 78 0 185 107 54 18 chr10 18824601 18824657 -121492108 + (TA)n Simple_repeat Simple_repeat 1 58 0 208 121 0 0 chr10 18825921 18825954 -121490811 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 1973 125 0 22 chr10 18826601 18826913 -121489852 + AluSg1 SINE Alu 5 309 0 1665 193 0 11 chr10 18826915 18827200 -121489565 + AluJo SINE Alu 1 282 -30 22 70 0 0 chr10 18827200 18827243 -121489522 + AT_rich Low_complexity Low_complexity 1 43 0 595 210 8 0 chr10 18828008 18828127 -121488638 + LTR31 LTR ERV1 499 618 -1 330 203 0 14 chr10 18828182 18828256 -121488509 - MER63 DNA MER1_type -310 751 679 639 226 221 0 chr10 18828472 18828662 -121488103 - MIR SINE MIR -22 240 9 330 282 18 9 chr10 18830161 18830271 -121486494 - L2 LINE L2 -8 3305 3195 6499 86 49 4 chr10 18831078 18831758 -121485007 - L1PA8 LINE L1 -2 6170 5464 1842 126 23 4 chr10 18831758 18832021 -121484744 - AluSx SINE Alu -12 300 33 6499 86 49 4 chr10 18832021 18832351 -121484414 - L1PA8 LINE L1 -708 5464 5150 3851 131 10 2 chr10 18832351 18832963 -121483802 + L1P LINE L1 4305 4921 -1225 378 0 0 0 chr10 18832963 18833005 -121483760 + (TA)n Simple_repeat Simple_repeat 2 43 0 2265 115 7 0 chr10 18833105 18833409 -121483356 - AluSx SINE Alu -6 306 1 1636 285 161 28 chr10 18833412 18834256 -121482509 + L2 LINE L2 1941 3008 -264 2270 160 70 5 chr10 18834256 18834656 -121482109 - MSTB LTR MaLR 0 426 1 1636 285 161 28 chr10 18834656 18834961 -121481804 + L2 LINE L2 3008 3271 -1 1495 154 62 19 chr10 18835390 18835649 -121481116 - AluJo SINE Alu -42 270 1 291 328 8 8 chr10 18835782 18835901 -121480864 - MIR SINE MIR -125 137 19 2477 90 0 0 chr10 18836012 18836323 -121480442 + AluSq SINE Alu 1 311 -2 195 358 8 16 chr10 18836327 18836450 -121480315 - L3 LINE CR1 -1339 238 117 1939 156 6 16 chr10 18836551 18836866 -121479899 + AluJb SINE Alu 1 312 0 2394 50 4 0 chr10 18837433 18837711 -121479054 + AluY SINE Alu 1 279 -32 187 54 54 0 chr10 18837714 18837751 -121479014 + A-rich Low_complexity Low_complexity 2 40 0 891 278 101 42 chr10 18837941 18838048 -121478717 + LTR16A LTR ERVL 51 150 -300 1687 167 123 23 chr10 18838048 18838437 -121478328 - MSTA LTR MaLR 0 428 1 891 278 101 42 chr10 18838437 18838707 -121478058 + LTR16A LTR ERVL 150 450 0 1594 173 20 34 chr10 18838873 18839168 -121477597 - AluJb SINE Alu -21 291 1 26 30 0 0 chr10 18839314 18839347 -121477418 + AT_rich Low_complexity Low_complexity 1 33 0 243 232 113 82 chr10 18840638 18840832 -121475933 + L2 LINE L2 3114 3313 0 2159 120 3 3 chr10 18841404 18841705 -121475060 - AluSx SINE Alu -11 301 1 205 231 19 0 chr10 18842026 18842078 -121474687 + (TA)n Simple_repeat Simple_repeat 1 53 0 249 217 0 0 chr10 18842110 18842156 -121474609 - LTR16C LTR ERVL 0 491 446 1790 172 14 3 chr10 18842164 18842461 -121474304 + AluSx SINE Alu 1 300 -12 729 118 28 28 chr10 18842464 18842642 -121474123 + GA-rich Low_complexity Low_complexity 3 180 0 856 234 85 55 chr10 18842649 18842717 -121474048 - LTR16C LTR ERVL -48 443 379 2715 184 28 4 chr10 18842717 18843223 -121473542 + LTR53 LTR ERVL 2 519 0 856 234 85 55 chr10 18843223 18843517 -121473248 - LTR16C LTR ERVL -112 379 70 2150 110 3 10 chr10 18843698 18843997 -121472768 + AluSx SINE Alu 1 297 -15 575 248 124 0 chr10 18844110 18844263 -121472502 - MER5A DNA MER1_type -5 184 13 201 327 62 19 chr10 18845444 18845606 -121471159 - L2 LINE L2 -222 3050 2882 414 171 0 0 chr10 18846179 18846255 -121470510 - Alu SINE Alu -1 311 236 1347 164 0 9 chr10 18846449 18846663 -121470102 - AluJo SINE Alu -100 212 1 5675 121 25 5 chr10 18846780 18847742 -121469023 - L1PB3 LINE L1 0 6154 5175 243 230 40 105 chr10 18847798 18847950 -121468815 + MLT1J2 LTR MaLR 1 142 -308 415 258 33 17 chr10 18848440 18848560 -121468205 + MIR SINE MIR 19 140 -122 717 283 141 39 chr10 18848576 18849211 -121467554 - L2 LINE L2 -4 3309 2605 3021 101 43 0 chr10 18849497 18849775 -121466990 + MER57B LTR ERV1 1 304 -130 210 71 0 0 chr10 18849775 18849803 -121466962 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 3021 101 43 0 chr10 18849803 18849940 -121466825 + MER57B LTR ERV1 304 434 0 281 278 83 9 chr10 18850211 18850319 -121466446 + L1ME LINE L1 5387 5502 -619 180 0 0 0 chr10 18851554 18851574 -121465191 + (CA)n Simple_repeat Simple_repeat 2 21 0 493 270 68 0 chr10 18852237 18852400 -121464365 + MIR SINE MIR 79 252 -10 1587 180 37 19 chr10 18852713 18853035 -121463730 + MER65C LTR ERV1 1 328 -133 1966 130 69 67 chr10 18853035 18853191 -121463574 + THE1B LTR MaLR 3 157 -207 3765 36 0 0 chr10 18853191 18853638 -121463127 - L1PA4 LINE L1 0 6155 5709 1966 130 69 67 chr10 18853638 18853842 -121462923 + THE1B LTR MaLR 157 364 0 626 168 17 8 chr10 18853842 18853960 -121462805 + MER65C LTR ERV1 321 439 -22 1111 142 14 71 chr10 18853993 18854204 -121462561 - AluJo SINE Alu -27 285 87 1167 170 66 0 chr10 18904205 18904417 -121412348 + THE1C LTR MaLR 149 374 -1 2102 105 0 68 chr10 18905692 18906015 -121410750 - AluSx SINE Alu -11 301 1 404 327 104 21 chr10 18906080 18906572 -121410193 - L1ME3A LINE L1 -288 5882 5347 234 0 0 0 chr10 18906595 18906621 -121410144 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 640 289 155 34 chr10 18906815 18907725 -121409040 - L1ME3A LINE L1 -1053 5093 4074 697 250 0 12 chr10 18907775 18907935 -121408830 + MLT1J LTR MaLR 29 186 -325 426 311 72 17 chr10 18908063 18908243 -121408522 + MLT1J LTR MaLR 214 403 -108 459 265 86 86 chr10 18908282 18908595 -121408170 - HAL1 LINE L1 -873 1634 1322 789 189 0 54 chr10 18909160 18909308 -121407457 + FLAM_C SINE Alu 2 141 -2 1363 223 59 56 chr10 18911005 18911431 -121405334 + MER110A LTR ERV1 42 468 0 219 188 43 29 chr10 18911740 18911809 -121404956 + L2 LINE L2 3122 3191 -122 2368 182 40 118 chr10 18911821 18912574 -121404191 - LTR8A LTR ERV1 0 727 34 471 196 149 0 chr10 18912593 18912700 -121404065 + L2 LINE L2 3190 3312 -1 496 317 48 59 chr10 18912850 18912980 -121403785 + L2 LINE L2 2402 2532 -782 2103 115 0 10 chr10 18912980 18913276 -121403489 + AluSx SINE Alu 11 303 -9 496 317 48 59 chr10 18913276 18913435 -121403330 + L2 LINE L2 2532 2688 -626 1090 106 0 0 chr10 18913459 18913601 -121403164 + AluSg/x SINE Alu 154 295 -17 725 244 118 61 chr10 18913605 18914136 -121402629 + L2 LINE L2 2711 3297 -16 1997 108 22 0 chr10 18914136 18914404 -121402361 - AluSq SINE Alu -12 301 28 725 244 118 61 chr10 18914404 18914423 -121402342 + L2 LINE L2 3297 3313 0 202 263 162 10 chr10 18914716 18914815 -121401950 - L2 LINE L2 -7 3306 3193 466 210 210 0 chr10 18915093 18915217 -121401548 + MLT1A1 LTR MaLR 1 150 -215 2386 82 0 7 chr10 18915279 18915584 -121401181 + AluSc SINE Alu 1 303 -6 1985 122 0 0 chr10 18915586 18915873 -121400892 + AluSx SINE Alu 20 306 0 1664 163 10 42 chr10 18916306 18916612 -121400153 + AluSx SINE Alu 1 296 -16 432 338 76 19 chr10 18916724 18916934 -121399831 - MLT1J2 LTR MaLR -130 320 99 266 167 0 0 chr10 18917082 18917130 -121399635 + Alu SINE Alu 249 296 -5 331 266 42 56 chr10 18917130 18917273 -121399492 - L3 LINE CR1 -43 1534 1394 752 297 92 44 chr10 18917289 18917808 -121398957 - MLT1H LTR MaLR 0 549 6 2183 82 0 37 chr10 18917822 18918139 -121398626 + AluSx SINE Alu 1 306 0 787 185 15 0 chr10 18918229 18918364 -121398401 - MSTC LTR MaLR 0 428 292 1488 153 45 45 chr10 18918364 18918442 -121398323 - L1MA4 LINE L1 -5 6166 6090 4404 101 20 23 chr10 18918442 18918502 -121398263 - LTR43 LTR ERV1 -2 600 541 2219 109 13 0 chr10 18918502 18918806 -121397959 + AluSg SINE Alu 1 308 -2 4404 101 20 23 chr10 18918806 18919347 -121397418 - LTR43 LTR ERV1 -61 541 1 2117 123 0 0 chr10 18919353 18919646 -121397119 - AluSx SINE Alu -19 293 1 1488 153 45 45 chr10 18919646 18919934 -121396831 - L1MA4 LINE L1 -85 6086 5770 2085 118 6 13 chr10 18919934 18920248 -121396517 - AluSx SINE Alu 0 312 1 269 319 12 31 chr10 18920303 18920466 -121396299 + C-rich Low_complexity Low_complexity 6 165 0 1413 219 69 99 chr10 18920574 18920670 -121396095 + L1MC5 LINE L1 6554 6651 -1310 2251 116 0 3 chr10 18920670 18920971 -121395794 + AluSx SINE Alu 1 300 -12 1413 219 69 99 chr10 18920971 18921679 -121395086 + L1MC5 LINE L1 6651 7329 -632 26 30 0 0 chr10 18921727 18921760 -121395005 + AT_rich Low_complexity Low_complexity 1 33 0 400 214 40 24 chr10 18921785 18921911 -121394854 + L1MC5 LINE L1 7345 7472 -489 325 0 0 0 chr10 18921911 18921946 -121394819 + U2 snRNA snRNA 1 35 -153 2509 59 0 7 chr10 18921960 18922267 -121394498 + AluY SINE Alu 1 305 -6 1076 226 37 66 chr10 18922270 18922726 -121394039 + L1MC5 LINE L1 7468 7910 -51 193 243 100 43 chr10 18923730 18923800 -121392965 - L2 LINE L2 -5 3267 3194 1866 130 0 0 chr10 18923966 18924228 -121392537 + AluSx SINE Alu 33 294 -18 212 314 20 0 chr10 18924265 18924316 -121392449 + L3b LINE CR1 1515 1566 -17 1815 156 7 14 chr10 18924330 18924619 -121392146 + AluJb SINE Alu 1 287 -25 279 258 161 0 chr10 18924706 18924830 -121391935 + MIR SINE MIR 87 230 -32 241 239 0 0 chr10 18925001 18925047 -121391718 - MIR SINE MIR -110 152 107 2299 109 7 0 chr10 18926027 18926330 -121390435 - AluSx SINE Alu -7 305 1 2409 70 10 0 chr10 18926816 18927115 -121389650 + AluSp SINE Alu 1 302 -11 2719 78 3 0 chr10 18927129 18927477 -121389288 + L1PA13 LINE L1 5789 6137 -26 1870 147 0 51 chr10 18927720 18928034 -121388731 + AluJo SINE Alu 3 300 -12 2312 116 0 0 chr10 18928037 18928339 -121388426 + AluSx SINE Alu 1 302 -10 290 157 0 0 chr10 18928611 18928662 -121388103 - Alu SINE Alu 0 300 250 2082 109 0 0 chr10 18928762 18929068 -121387697 + AluSx SINE Alu 17 322 0 1663 202 154 14 chr10 18929692 18930127 -121386638 - LTR54B LTR ERV1 -2 496 1 925 101 0 0 chr10 18931536 18931655 -121385110 + AluSg SINE Alu 1 119 -191 355 326 116 0 chr10 18931959 18932097 -121384668 - MLT1K LTR MaLR -375 213 60 460 243 19 9 chr10 18932315 18932422 -121384343 - MER5A DNA MER1_type 0 189 82 241 319 0 0 chr10 18932514 18932586 -121384179 + L3 LINE CR1 1244 1315 -262 1578 128 35 86 chr10 18932587 18932638 -121384127 + MSTC LTR MaLR 1 53 -375 2244 117 0 0 chr10 18932638 18932937 -121383828 - AluSx SINE Alu -13 299 1 1578 128 35 86 chr10 18932937 18933198 -121383567 + MSTC LTR MaLR 53 297 -131 927 170 0 7 chr10 18934249 18934396 -121382369 - FRAM SINE Alu -30 146 1 1790 150 46 29 chr10 18934722 18935029 -121381736 + AluSx SINE Alu 1 312 0 216 0 0 0 chr10 18935468 18935492 -121381273 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 697 250 78 96 chr10 18935773 18936053 -121380712 + MLT1H LTR MaLR 3 286 -263 1696 147 55 20 chr10 18936053 18936345 -121380420 + AluJo SINE Alu 10 311 -1 697 250 78 96 chr10 18936345 18936504 -121380261 + MLT1H LTR MaLR 286 446 -103 2159 146 48 31 chr10 18936676 18937032 -121379733 - THE1B LTR MaLR -2 362 1 2223 96 3 3 chr10 18937571 18937863 -121378902 + AluSg1 SINE Alu 1 292 -17 21 71 0 0 chr10 18938406 18938448 -121378317 + AT_rich Low_complexity Low_complexity 1 42 0 447 293 52 65 chr10 18939408 18939492 -121377273 + MIR SINE MIR 24 108 -154 862 144 0 182 chr10 18939492 18939728 -121377037 - 7SK RNA RNA 0 193 1 447 293 52 65 chr10 18939728 18939872 -121376893 + MIR SINE MIR 108 249 -13 710 243 75 45 chr10 18940183 18940261 -121376504 - MER34B LTR ERV1 -20 545 471 1868 157 10 0 chr10 18940261 18940560 -121376205 + AluSg SINE Alu 1 302 -8 710 243 75 45 chr10 18940560 18940749 -121376016 - MER34B LTR ERV1 -94 471 270 923 133 4 124 chr10 18940785 18940853 -121375912 + MER96B DNA MER1_type? 48 123 -294 1917 156 0 3 chr10 18940853 18941141 -121375624 - AluJb SINE Alu -25 287 1 923 133 4 124 chr10 18941141 18941306 -121375459 + MER96B DNA MER1_type? 123 253 -164 941 148 6 60 chr10 18941313 18941495 -121375270 - AluJo SINE Alu -19 293 122 277 154 0 0 chr10 18941495 18941543 -121375222 + MER96B DNA MER1_type? 269 316 -101 1748 185 76 47 chr10 18941543 18941949 -121374816 - MLT2B1 LTR ERVL -3 517 100 701 150 18 9 chr10 18941962 18942075 -121374690 + AluJb SINE Alu 174 287 -25 595 133 0 0 chr10 18942082 18942172 -121374593 - MLT2B1 LTR ERVL -421 94 5 292 217 0 43 chr10 18942175 18942244 -121374521 + MER96B DNA MER1_type? 321 386 -31 516 304 20 14 chr10 18942322 18942470 -121374295 - L2 LINE L2 -8 3264 3116 1751 119 16 8 chr10 18942519 18942771 -121373994 - AluSg SINE Alu -15 295 42 944 190 13 0 chr10 18942776 18942934 -121373831 + AluJb SINE Alu 127 286 -26 249 342 101 9 chr10 18942975 18943203 -121373562 - L2 LINE L2 -667 2647 2399 8114 31 0 4 chr10 18943261 18944240 -121372525 - L1PA3 LINE L1 -786 5360 4386 7212 30 2 0 chr10 18944240 18945023 -121371742 + L1PA3 LINE L1 5356 6153 -2 1821 132 3 24 chr10 18945035 18945323 -121371442 - AluSx SINE Alu -30 282 1 2240 109 3 0 chr10 18946596 18946899 -121369866 + AluSg SINE Alu 1 304 -6 1622 185 0 34 chr10 18947482 18947780 -121368985 + AluJo SINE Alu 21 308 -4 204 342 13 7 chr10 18947830 18947979 -121368786 + A-rich Low_complexity Low_complexity 4 153 0 882 145 0 0 chr10 18947989 18948120 -121368645 + FLAM_C SINE Alu 1 131 -12 592 280 69 69 chr10 18948257 18948548 -121368217 + HAL1b LINE L1 216 509 -839 2275 96 3 3 chr10 18948548 18948860 -121367905 + AluSq SINE Alu 1 312 -1 592 280 69 69 chr10 18948860 18949018 -121367747 + HAL1b LINE L1 508 665 -683 293 176 0 0 chr10 18949390 18949441 -121367324 - FLAM_A SINE Alu -16 117 67 3531 74 7 2 chr10 18949633 18950081 -121366684 - L1PA13 LINE L1 -4 6159 5710 870 160 0 0 chr10 18950131 18950256 -121366509 + FLAM_A SINE Alu 1 125 -8 719 268 55 70 chr10 18950908 18951097 -121365668 + L2 LINE L2 7 190 -3124 2012 150 7 3 chr10 18951097 18951390 -121365375 + AluSx SINE Alu 1 294 -18 719 268 55 70 chr10 18951390 18951528 -121365237 + L2 LINE L2 190 329 -2985 1540 256 40 6 chr10 18951794 18952326 -121364439 + L1ME2 LINE L1 2797 3346 -2800 656 208 61 122 chr10 18952340 18952490 -121364275 + L1ME2 LINE L1 3510 3631 -2515 2246 113 0 0 chr10 18952490 18952783 -121363982 - AluSx SINE Alu -19 293 1 656 208 61 122 chr10 18952783 18952959 -121363806 + L1ME2 LINE L1 3631 3816 -2330 699 210 0 62 chr10 18952977 18953139 -121363626 + MSTD LTR MaLR 2 153 -243 781 114 35 0 chr10 18953177 18953291 -121363474 + MSTD LTR MaLR 279 396 0 257 264 23 11 chr10 18953291 18953378 -121363387 + L1ME2 LINE L1 3851 3938 -2208 846 165 0 119 chr10 18953385 18953579 -121363186 + AluSg/x SINE Alu 141 311 -1 362 228 0 0 chr10 18953594 18953678 -121363087 + L1MC/D LINE L1 5731 5814 -357 1572 254 103 15 chr10 18953681 18954264 -121362501 + L1ME2 LINE L1 3962 4595 -1551 2419 241 35 19 chr10 18954266 18954916 -121361849 + L1ME2 LINE L1 5493 6153 -11 632 241 67 27 chr10 18954947 18955171 -121361594 + L2 LINE L2 3080 3312 -1 2179 98 0 7 chr10 18955194 18955510 -121361255 - AluSq SINE Alu 0 314 1 736 240 35 66 chr10 18955786 18956074 -121360691 - MER97c DNA MER1_type? 0 1090 812 2195 104 0 7 chr10 18956159 18956456 -121360309 + AluSx SINE Alu 1 295 -17 2302 232 31 28 chr10 18956733 18957336 -121359429 - MER97a DNA MER1_type? -289 605 1 2210 107 10 0 chr10 18957394 18957685 -121359080 + AluSx SINE Alu 1 294 -18 614 173 8 0 chr10 18957688 18957821 -121358944 + (TA)n Simple_repeat Simple_repeat 1 134 0 2103 215 23 14 chr10 18957834 18958267 -121358498 - MER65C LTR ERV1 -24 437 1 2123 107 3 7 chr10 18958614 18958904 -121357861 + AluSx SINE Alu 2 290 -22 1406 180 77 15 chr10 18959900 18960172 -121356593 - AluJo SINE Alu -23 289 1 1636 221 179 2 chr10 18960198 18960627 -121356138 - MLT1D LTR MaLR 0 505 1 2169 110 10 0 chr10 18960762 18961053 -121355712 + AluSx SINE Alu 2 295 -17 4213 151 48 69 chr10 18961520 18961581 -121355184 - L1MB7 LINE L1 -8 6176 6115 2282 93 0 13 chr10 18961581 18961881 -121354884 + AluSx SINE Alu 1 296 -16 4213 151 48 69 chr10 18961881 18962485 -121354280 - L1MB7 LINE L1 -69 6115 5500 2491 142 72 5 chr10 18962485 18962886 -121353879 + MSTA LTR MaLR 1 428 0 4213 151 48 69 chr10 18962886 18962953 -121353812 - L1MB7 LINE L1 -684 5500 5433 2014 147 3 6 chr10 18962953 18963265 -121353500 - AluSq SINE Alu 0 313 3 4213 151 48 69 chr10 18963265 18963549 -121353216 - L1MB7 LINE L1 -751 5433 5186 1811 143 10 14 chr10 18964623 18964917 -121351848 - AluJb SINE Alu -19 293 1 1224 100 0 18 chr10 18965349 18965519 -121351246 + AluSx SINE Alu 1 167 -145 763 147 0 0 chr10 18965635 18965751 -121351014 + AluSp SINE Alu 1 116 -197 228 125 0 0 chr10 18965751 18965833 -121350932 + Alu SINE Alu 250 331 0 331 250 148 0 chr10 18965833 18965941 -121350824 + HsTC2 DNA Tc2 21 144 -1754 * 943 183 27 174 chr10 18965938 18966349 -121350416 + HsTC2 DNA Tc2 1281 1751 -147 210 71 0 0 chr10 18966349 18966377 -121350388 + (CA)n Simple_repeat Simple_repeat 1 28 0 1819 156 3 14 chr10 18966387 18966682 -121350083 - AluJb SINE Alu -20 292 1 943 183 27 174 chr10 18966682 18966775 -121349990 + HsTC2 DNA Tc2 1761 1890 -8 917 285 95 29 chr10 18966762 18967141 -121349624 - MLT1J LTR MaLR -14 497 94 * 788 249 38 33 chr10 18967145 18967358 -121349407 - MER58C DNA MER1_type -1 214 1 1962 113 85 3 chr10 18967396 18967679 -121349086 - AluSx SINE Alu -6 306 1 2067 123 0 13 chr10 18967852 18968154 -121348611 + AluSg SINE Alu 1 298 -12 3713 137 22 95 chr10 18968160 18968545 -121348220 + L1MB3 LINE L1 5440 5851 -332 2497 69 0 3 chr10 18968545 18968851 -121347914 + AluY SINE Alu 1 305 -6 3713 137 22 95 chr10 18968851 18969212 -121347553 + L1MB3 LINE L1 5851 6237 54 2238 86 3 7 chr10 18969212 18969504 -121347261 + L1PA7 LINE L1 5864 6154 0 2124 131 3 0 chr10 18969508 18969806 -121346959 + AluSp SINE Alu 1 299 -14 3713 137 22 95 chr10 18969806 18969855 -121346910 + L1MB3 LINE L1 6132 6183 0 2444 67 0 0 chr10 18969863 18970160 -121346605 + AluY SINE Alu 1 297 -14 1128 247 193 30 chr10 18970350 18970584 -121346181 + MER20B DNA MER1_type 1 195 -588 2758 175 74 17 chr10 18970584 18970844 -121345921 - MER41D LTR ERV1 0 557 313 2404 101 0 0 chr10 18970844 18971150 -121345615 + AluSq SINE Alu 1 306 -7 2758 175 74 17 chr10 18971150 18971416 -121345349 - MER41D LTR ERV1 -244 313 1 1128 247 193 30 chr10 18971416 18971720 -121345045 + MER20B DNA MER1_type 195 627 -156 2196 139 40 3 chr10 18972067 18972420 -121344345 - MLT2D LTR ERVL -48 366 1 2297 107 0 0 chr10 18973004 18973302 -121343463 - AluSg SINE Alu -12 298 1 568 327 71 5 chr10 18973402 18973613 -121343152 - MIR SINE MIR -15 247 23 2801 160 6 26 chr10 18973615 18973909 -121342856 - MER66B LTR ERV1 0 486 203 2202 117 7 0 chr10 18973909 18974216 -121342549 + AluSx SINE Alu 1 309 -3 2801 160 6 26 chr10 18974216 18974390 -121342375 - MER66B LTR ERV1 -283 203 27 1268 153 51 16 chr10 18974446 18974701 -121342064 + MER21A LTR ERV1 1 264 -667 2800 184 51 19 chr10 18974706 18975239 -121341526 + MER21A LTR ERV1 376 925 -6 1516 184 7 14 chr10 18975795 18976083 -121340682 + AluJb SINE Alu 1 286 -26 235 177 32 0 chr10 18976083 18976145 -121340620 + (TA)n Simple_repeat Simple_repeat 1 64 0 246 174 65 76 chr10 18976152 18976244 -121340521 - L1MC4 LINE L1 -1337 6705 6615 724 230 0 0 chr10 18976972 18977098 -121339667 + FLAM_C SINE Alu 2 127 -16 24 0 0 0 chr10 18977098 18977122 -121339643 + AT_rich Low_complexity Low_complexity 1 24 0 2957 77 25 10 chr10 18977696 18978088 -121338677 + MLT2A1 LTR ERVL 1 398 -46 309 73 41 77 chr10 18978089 18978344 -121338421 + (TA)n Simple_repeat Simple_repeat 1 245 0 221 145 29 43 chr10 18978347 18978416 -121338349 + (TATAA)n Simple_repeat Simple_repeat 2 69 0 185 0 0 39 chr10 18978530 18978556 -121338209 + (TA)n Simple_repeat Simple_repeat 1 25 0 257 0 0 29 chr10 18978579 18978613 -121338152 + (TA)n Simple_repeat Simple_repeat 2 34 0 240 82 49 33 chr10 18978633 18978694 -121338071 + (TA)n Simple_repeat Simple_repeat 2 63 0 312 319 40 62 chr10 18978792 18979018 -121337747 + L3 LINE CR1 977 1197 -380 1712 171 7 31 chr10 18979021 18979314 -121337451 + AluJo SINE Alu 3 288 -24 1700 166 15 0 chr10 18979414 18979685 -121337080 - AluJo SINE Alu -37 275 1 318 367 25 32 chr10 18979946 18980104 -121336661 - MIR3 SINE MIR -34 174 18 1914 155 10 0 chr10 18980499 18980803 -121335962 - AluJo SINE Alu -5 307 1 464 256 226 0 chr10 18981579 18981747 -121335018 - MIR SINE MIR -43 219 14 2078 120 0 40 chr10 18982072 18982396 -121334369 - AluSx SINE Alu -1 311 1 1750 184 29 41 chr10 18982428 18982745 -121334020 + Charlie4a DNA MER1_type 49 361 -1600 2198 116 0 3 chr10 18982745 18983048 -121333717 - AluSg SINE Alu -8 302 1 1750 184 29 41 chr10 18983048 18983143 -121333622 + Charlie4a DNA MER1_type 361 456 -52 682 263 80 9 chr10 18983614 18983827 -121332938 + MIR SINE MIR 15 242 -20 1501 166 3 55 chr10 18984016 18984305 -121332460 - MLT2D LTR ERVL 0 414 141 1308 190 38 90 chr10 18984307 18984526 -121332239 - MLT1A1 LTR MaLR -5 360 166 2151 141 0 0 chr10 18984526 18984832 -121331933 - AluSg SINE Alu -4 306 1 1308 190 38 90 chr10 18984832 18984980 -121331785 - MLT1A1 LTR MaLR -199 166 12 892 107 57 7 chr10 18984991 18985131 -121331634 - MLT2D LTR ERVL -267 147 1 807 277 95 69 chr10 18985764 18986000 -121330765 + LTR16B LTR ERVL 2 230 -234 1941 124 13 23 chr10 18986000 18986307 -121330458 + AluSx SINE Alu 1 304 -8 807 277 95 69 chr10 18986307 18986521 -121330244 + LTR16B LTR ERVL 230 464 0 281 341 39 0 chr10 18986597 18986726 -121330039 - MER94 DNA DNA 0 134 1 366 174 121 114 chr10 18986823 18986972 -121329793 - MER103 DNA DNA -7 159 10 933 224 42 80 chr10 18987866 18988312 -121328453 + MLT1A1 LTR MaLR 1 365 0 757 184 6 11 chr10 18988413 18988592 -121328173 + GA-rich Low_complexity Low_complexity 3 180 0 23 0 0 0 chr10 18988961 18988984 -121327781 + AT_rich Low_complexity Low_complexity 1 23 0 938 130 15 0 chr10 18989260 18989391 -121327374 + AluJo SINE Alu 3 135 -177 1189 95 0 0 chr10 18989544 18989691 -121327074 + AluSq SINE Alu 130 276 -37 820 36 27 0 chr10 18989696 18989807 -121326958 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 1968 141 3 0 chr10 18990652 18990935 -121325830 - AluSx SINE Alu -13 299 16 6988 69 23 0 chr10 18990945 18992141 -121324624 - L1PA8 LINE L1 -1 6171 4967 1329 201 18 88 chr10 18992146 18992530 -121324235 + MLT2B1 LTR ERVL 8 364 -156 309 318 169 17 chr10 18992530 18992842 -121323923 + L2 LINE L2 2654 3010 -262 2151 101 3 48 chr10 18993125 18993441 -121323324 - AluSg SINE Alu -8 302 1 1838 115 0 0 chr10 18994252 18994496 -121322269 - AluSx SINE Alu -9 303 60 470 291 33 28 chr10 18994669 18994851 -121321914 - MER5A DNA MER1_type -6 183 1 2729 98 0 6 chr10 18994908 18995274 -121321491 + THE1B LTR MaLR 1 364 0 186 296 14 0 chr10 18995455 18995526 -121321239 + L2 LINE L2 3200 3271 -1 757 211 54 11 chr10 18995884 18996069 -121320696 - MIR SINE MIR -48 214 22 516 305 45 0 chr10 18996595 18996772 -121319993 + MIR SINE MIR 78 262 0 1789 146 57 4 chr10 18996797 18997078 -121319687 - AluJb SINE Alu -16 296 1 2717 228 49 37 chr10 18997876 18998971 -121317794 + L1M4 LINE L1 2298 3405 -2741 899 137 0 39 chr10 18998978 18999131 -121317634 - AluSg/x SINE Alu -59 251 105 1696 114 5 106 chr10 18999293 18999661 -121317104 - L1MB8 LINE L1 -6 6172 5842 221 325 25 25 chr10 18999661 18999781 -121316984 + L2 LINE L2 3189 3308 -5 6510 188 15 8 chr10 19000466 19001591 -121315174 - L1M1 LINE L1 -6274 1291 159 1321 57 36 5 chr10 19001691 19001885 -121314880 - L1PA15-16 LINE L1 -3927 2922 2723 1231 191 0 0 chr10 19001903 19002113 -121314652 - MER2 DNA MER2_type -135 210 1 429 324 21 14 chr10 19002395 19002685 -121314080 - L1M4 LINE L1 -2166 3980 3689 573 275 141 36 chr10 19003632 19003767 -121312998 - MLT1K LTR MaLR -115 473 354 2736 115 36 7 chr10 19003767 19004183 -121312582 - MSTA LTR MaLR 0 428 1 573 275 141 36 chr10 19004183 19004323 -121312442 - MLT1K LTR MaLR -234 354 169 1176 151 5 19 chr10 19005070 19005276 -121311489 - MLT1A1 LTR MaLR -162 203 1 350 321 15 15 chr10 19005386 19005517 -121311248 - L2 LINE L2 0 3272 3142 394 287 106 21 chr10 19006989 19007204 -121309561 + MIR SINE MIR 31 262 0 2260 125 33 39 chr10 19007424 19007784 -121308981 - THE1B LTR MaLR -6 358 1 1948 178 19 26 chr10 19008483 19008860 -121307905 - MSTD LTR MaLR -22 374 1 1345 229 55 20 chr10 19008863 19009261 -121307504 + L1MC/D LINE L1 5267 5678 -2130 237 253 102 121 chr10 19009740 19009906 -121306859 + MIR SINE MIR 29 191 -71 1014 170 42 0 chr10 19011076 19011288 -121305477 - L1MB4 LINE L1 0 6180 5960 380 217 12 0 chr10 19011288 19011371 -121305394 - L1MB4 LINE L1 -614 5566 5483 182 37 37 0 chr10 19011375 19011402 -121305363 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1440 137 0 109 chr10 19011405 19011734 -121305031 - AluJb SINE Alu -9 293 1 1164 175 5 10 chr10 19011756 19011956 -121304809 - AluJb SINE Alu -8 304 106 977 294 79 17 chr10 19012195 19012661 -121304104 - L2 LINE L2 -432 2882 2388 552 199 51 80 chr10 19012827 19013103 -121303662 + L1ME1 LINE L1 3684 3951 -2195 27 29 0 0 chr10 19013311 19013345 -121303420 + AT_rich Low_complexity Low_complexity 1 34 0 1686 171 0 8 chr10 19013466 19013729 -121303036 - AluSx SINE Alu -43 269 9 8571 106 18 18 chr10 19013739 19015233 -121301532 - L1M1 LINE L1 -4219 3346 1778 5576 159 23 1 chr10 19015378 19016929 -121299836 - L1MA3 LINE L1 -326 5979 4381 225 94 0 0 chr10 19016929 19016961 -121299804 + (TG)n Simple_repeat Simple_repeat 2 33 0 5576 159 23 1 chr10 19016961 19017115 -121299650 - L1MA3 LINE L1 -1924 4381 4232 3403 194 54 32 chr10 19017271 19018237 -121298528 + L1ME1 LINE L1 5158 6158 -8 280 81 0 0 chr10 19018522 19018559 -121298206 + L1MA2 LINE L1 6154 6190 -114 229 267 48 29 chr10 19019286 19019391 -121297374 + L2 LINE L2 2896 3002 -270 342 218 252 14 chr10 19019705 19019852 -121296913 + LTR50 LTR ERVL 82 263 -532 741 117 0 0 chr10 19019877 19020005 -121296760 + (TTTTC)n Simple_repeat Simple_repeat 1 128 0 244 175 0 70 chr10 19020026 19020083 -121296682 + LTR50 LTR ERVL 418 470 -325 279 272 74 0 chr10 19020254 19020335 -121296430 + LTR33A LTR ERVL 437 523 0 798 121 25 32 chr10 19020453 19020610 -121296155 + L1MA5 LINE L1 6123 6278 -22 423 253 0 0 chr10 19020631 19020801 -121295964 + (TA)n Simple_repeat Simple_repeat 1 170 0 40 0 0 0 chr10 19020848 19020888 -121295877 + AT_rich Low_complexity Low_complexity 1 40 0 3134 240 80 17 chr10 19020940 19022099 -121294666 + L1MC4a LINE L1 2319 3550 -2596 1007 239 141 25 chr10 19022728 19023126 -121293639 + MER113 DNA MER1_type? 34 477 -44 569 270 61 74 chr10 19023555 19023881 -121292884 + L1MC4a LINE L1 5609 5930 -1878 42 0 0 0 chr10 19024082 19024124 -121292641 + AT_rich Low_complexity Low_complexity 1 42 0 353 214 0 45 chr10 19024132 19024244 -121292521 - L1ME4a LINE L1 -59 6062 5956 1051 168 5 37 chr10 19024579 19024769 -121291996 - AluJb SINE Alu -11 301 118 836 121 0 0 chr10 19024780 19024896 -121291869 - FLAM_C SINE Alu -5 138 23 4940 207 27 34 chr10 19025026 19026092 -121290673 - L1M4 LINE L1 -5483 1059 1 1256 187 137 20 chr10 19026690 19027033 -121289732 + MER31B LTR ERV1 40 422 -44 2332 89 3 13 chr10 19027037 19027351 -121289414 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr10 19027466 19027487 -121289278 + AT_rich Low_complexity Low_complexity 1 21 0 386 181 131 20 chr10 19027904 19028013 -121288752 + L1M LINE L1 5260 5383 -805 2165 112 7 26 chr10 19028013 19028316 -121288449 + AluSx SINE Alu 1 297 -15 386 181 131 20 chr10 19028316 19028327 -121288438 + L1M LINE L1 5383 5391 -797 2067 149 10 0 chr10 19028675 19028984 -121287781 + AluJb SINE Alu 1 312 0 2283 92 10 0 chr10 19029493 19029785 -121286980 + AluY SINE Alu 1 295 -16 1078 143 65 0 chr10 19029785 19029953 -121286812 + AluSg/x SINE Alu 134 312 0 1301 173 41 0 chr10 19029954 19030197 -121286568 + L1ME LINE L1 5320 5572 -594 1448 113 10 63 chr10 19030519 19030820 -121285945 + AluY SINE Alu 1 285 -16 3366 143 31 5 chr10 19031281 19031854 -121284911 - L1MB5 LINE L1 -8 6166 5579 182 336 45 18 chr10 19032178 19032288 -121284477 - L2 LINE L2 -1 3312 3200 439 333 0 0 chr10 19033248 19033371 -121283394 + (CA)n Simple_repeat Simple_repeat 2 124 0 276 214 54 0 chr10 19033371 19033427 -121283338 - MER4-int LTR ERV1 -5428 1170 1112 232 265 88 0 chr10 19034085 19034153 -121282612 + MIR SINE MIR 65 138 -70 2074 145 9 29 chr10 19034154 19034498 -121282267 + MER1B DNA MER1_type 1 337 -2 192 237 0 0 chr10 19034510 19034548 -121282217 + L3b LINE CR1 1520 1557 -26 * 217 240 20 0 chr10 19034516 19034566 -121282199 + MIR3 SINE MIR 147 197 -11 6163 114 30 3 chr10 19035009 19036103 -121280662 + L1PA16 LINE L1 5026 6156 -10 2392 97 0 3 chr10 19036103 19036413 -121280352 + AluSq SINE Alu 1 309 -4 6163 114 30 3 chr10 19036413 19036425 -121280340 + L1PA16 LINE L1 6156 6166 0 26 0 0 0 chr10 19036513 19036539 -121280226 + AT_rich Low_complexity Low_complexity 1 26 0 363 302 83 10 chr10 19036602 19036794 -121279971 + L1M4 LINE L1 4279 4484 -1662 321 284 125 57 chr10 19037221 19037397 -121279368 - MIR SINE MIR -67 195 8 209 258 0 16 chr10 19037974 19038036 -121278729 + G-rich Low_complexity Low_complexity 2 62 0 1784 37 14 5 chr10 19039846 19040063 -121276702 + L1PA5 LINE L1 5936 6154 0 636 277 83 14 chr10 19040163 19040452 -121276313 - HAL1 LINE L1 -848 1659 1351 483 207 0 0 chr10 19040609 19040696 -121276069 + MER58B DNA MER1_type 1 87 -254 791 149 137 19 chr10 19040702 19040863 -121275902 + MSTA LTR MaLR 200 379 -49 1265 158 51 8 chr10 19040873 19041107 -121275658 + MER58B DNA MER1_type 97 340 -1 1290 146 124 41 chr10 19041187 19041454 -121275311 - AluJb SINE Alu -13 289 1 255 268 0 0 chr10 19041566 19041637 -121275128 - L1ME3A LINE L1 -25 6145 6075 447 191 113 9 chr10 19041641 19041756 -121275009 - L1ME3A LINE L1 -282 5888 5762 4351 211 66 11 chr10 19041897 19043129 -121273636 - L1MEc LINE L1 -2857 3358 2110 1380 150 22 22 chr10 19043136 19043403 -121273362 - AluSx SINE Alu -6 306 40 267 342 42 0 chr10 19044544 19044664 -121272101 + L2 LINE L2 2934 3058 -214 1633 269 71 4 chr10 19045416 19045951 -121270814 + L1ME3A LINE L1 5597 6167 -3 245 204 112 82 chr10 19047476 19047574 -121269191 + MIR SINE MIR 70 170 -92 2537 184 28 2 chr10 19047764 19048232 -121268533 + L1MB2 LINE L1 5690 6169 -2 1550 196 7 14 chr10 19048241 19048532 -121268233 + AluJb SINE Alu 2 290 -22 278 275 61 61 chr10 19048593 19048724 -121268041 + HAL1 LINE L1 6 136 -2371 184 242 0 0 chr10 19049624 19049657 -121267108 + L2 LINE L2 3219 3251 -21 289 203 0 72 chr10 19049822 19049891 -121266874 - L2 LINE L2 -9 3304 3241 891 139 7 0 chr10 19050144 19050281 -121266484 + FLAM_C SINE Alu 1 138 -5 2229 145 25 30 chr10 19050541 19050907 -121265858 + THE1B LTR MaLR 1 364 0 381 228 123 57 chr10 19051673 19051884 -121264881 - MER102b DNA MER1_type 0 341 117 253 238 55 85 chr10 19051940 19052104 -121264661 + MIR3 SINE MIR 29 187 -21 411 108 0 181 chr10 19052527 19052815 -121263950 - L1P LINE L1 -804 5342 5107 35373 91 11 15 chr10 19052823 19057044 -121259721 + L1P LINE L1 2 4202 -1944 279 0 0 0 chr10 19057044 19057075 -121259690 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 35373 91 11 15 chr10 19057075 19057993 -121258772 + L1P LINE L1 4202 5122 -1024 280 241 60 12 chr10 19058209 19058292 -121258473 + L2 LINE L2 2605 2691 -623 2212 133 0 0 chr10 19058404 19058713 -121258052 - AluSx SINE Alu -3 309 1 1647 162 7 42 chr10 19059000 19059309 -121257456 + AluJo SINE Alu 1 298 -14 806 146 7 15 chr10 19059314 19059451 -121257314 + AluJo SINE Alu 1 136 -176 4142 84 9 0 chr10 19059452 19059977 -121256788 + L1PA10 LINE L1 5634 6163 -5 767 152 64 0 chr10 19060731 19060856 -121255909 + FLAM_C SINE Alu 1 133 0 306 231 125 29 chr10 19060942 19061046 -121255719 + L2 LINE L2 3134 3247 -25 453 217 200 0 chr10 19061277 19061392 -121255373 + MER91C DNA MER1_type 3 140 0 738 244 85 10 chr10 19061506 19061707 -121255058 - MLT1J LTR MaLR -295 216 1 208 333 48 0 chr10 19061811 19061895 -121254870 + L2 LINE L2 2584 2671 -643 1952 131 0 31 chr10 19062037 19062350 -121254415 - AluSx SINE Alu 0 304 1 659 206 38 60 chr10 19062612 19062796 -121253969 + MLT1E2 LTR MaLR 1 180 -446 1388 142 0 0 chr10 19062802 19062999 -121253766 - AluSg/x SINE Alu -14 298 102 1126 124 6 17 chr10 19063004 19063182 -121253583 + THE1C LTR MaLR 200 375 0 256 289 22 22 chr10 19063356 19063446 -121253319 + L1MC/D LINE L1 4886 4975 -1171 411 285 166 57 chr10 19063697 19063786 -121252979 + L1MC/D LINE L1 5278 5356 -795 7594 48 10 0 chr10 19063786 19064916 -121251849 + L1PA7 LINE L1 5014 6154 0 411 285 166 57 chr10 19064916 19065194 -121251571 + L1MC/D LINE L1 5356 5683 -468 2353 92 0 0 chr10 19067174 19067469 -121249296 + AluSg SINE Alu 1 295 -15 2606 36 0 3 chr10 19068946 19069248 -121247517 + AluY SINE Alu 1 301 -10 390 257 153 0 chr10 19069859 19070003 -121246762 - MIR SINE MIR 0 262 97 337 115 33 16 chr10 19070779 19070871 -121245894 - Alu SINE Alu 0 332 240 393 39 0 0 chr10 19071350 19071401 -121245364 + (TG)n Simple_repeat Simple_repeat 1 51 0 2057 149 10 0 chr10 19071466 19071775 -121244990 - AluJb SINE Alu 0 312 1 2214 96 13 26 chr10 19072134 19072436 -121244329 - AluSq SINE Alu -15 298 1 2236 91 0 14 chr10 19073060 19073394 -121243371 + AluSq SINE Alu 1 330 0 833 205 81 91 chr10 19073527 19073834 -121242931 + L1MC4 LINE L1 7457 7760 -282 2985 109 12 2 chr10 19073838 19074259 -121242506 + MER57B LTR ERV1 10 434 0 1071 201 66 18 chr10 19074259 19074532 -121242233 + L1MC4 LINE L1 7757 8042 0 205 261 0 0 chr10 19075145 19075191 -121241574 + L2 LINE L2 3255 3300 -13 1145 153 137 46 chr10 19075700 19075962 -121240803 + MER4B LTR ERV1 1 286 -324 1607 116 8 25 chr10 19075962 19076166 -121240599 - AluSg/x SINE Alu -5 307 106 2066 171 108 35 chr10 19076166 19076622 -121240143 + LTR2B LTR ERV1 1 489 -1 1607 116 8 25 chr10 19076622 19076658 -121240107 - AluSg/x SINE Alu -206 106 71 2401 97 6 17 chr10 19076658 19077008 -121239757 + MER4E LTR ERV1 434 779 0 282 106 0 0 chr10 19078094 19078141 -121238624 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1905 159 0 24 chr10 19078144 19078440 -121238325 - AluJo SINE Alu -23 289 1 1600 287 139 47 chr10 19079412 19079510 -121237255 - MER115 DNA AcHobo -8 685 597 2123 143 0 9 chr10 19079510 19079825 -121236940 - AluSx SINE Alu 0 312 1 1600 287 139 47 chr10 19079825 19080346 -121236419 - MER115 DNA AcHobo -96 597 9 196 243 106 87 chr10 19080765 19080827 -121235938 + MIR3 SINE MIR 7 66 -187 2238 125 0 0 chr10 19080827 19081132 -121235633 - AluSx SINE Alu -7 305 1 196 243 106 87 chr10 19081132 19081206 -121235559 + MIR3 SINE MIR 66 160 -93 1600 134 115 7 chr10 19081771 19082040 -121234725 + AluSg1 SINE Alu 2 299 -10 2137 126 3 0 chr10 19082172 19082465 -121234300 - AluSq SINE Alu -19 294 1 1199 127 6 6 chr10 19083522 19083695 -121233070 - AluSc SINE Alu -11 298 126 2471 93 0 0 chr10 19083698 19084009 -121232756 - AluSx SINE Alu -1 311 1 1197 154 20 36 chr10 19084622 19084869 -121231896 + AluJo SINE Alu 67 309 -3 1973 110 46 7 chr10 19086006 19086288 -121230477 - AluSx SINE Alu -19 293 1 2316 115 0 0 chr10 19086828 19087140 -121229625 + AluJb SINE Alu 1 312 0 238 202 55 73 chr10 19087154 19087263 -121229502 + L1ME4a LINE L1 5997 6103 -18 273 195 6 0 chr10 19087266 19087322 -121229443 + Alu SINE Alu 1 39 -261 258 375 44 47 chr10 19088643 19089120 -121227645 + L2 LINE L2 2570 3044 -228 1956 115 52 0 chr10 19089168 19089476 -121227289 - AluSx SINE Alu 0 322 1 276 271 207 0 chr10 19089662 19089802 -121226963 + L2 LINE L2 3117 3285 -28 2453 90 0 0 chr10 19089884 19090184 -121226581 - AluSx SINE Alu -12 300 1 203 321 12 0 chr10 19090187 19090268 -121226497 + L2 LINE L2 3231 3312 -1 2173 114 0 3 chr10 19090923 19091221 -121225544 - AluSx SINE Alu -15 297 1 1527 106 66 4 chr10 19091389 19091645 -121225120 - L1MA8 LINE L1 -5 6286 6015 2327 95 0 0 chr10 19091743 19092038 -121224727 - AluSx SINE Alu -17 295 1 1156 164 16 62 chr10 19092947 19093054 -121223711 + L1MB3 LINE L1 5683 5793 -390 2500 50 17 3 chr10 19093054 19093355 -121223410 + AluY SINE Alu 1 305 -6 1156 164 16 62 chr10 19093355 19093491 -121223274 + L1MB3 LINE L1 5793 5915 -268 1864 151 0 3 chr10 19093572 19093857 -121222908 - AluJb SINE Alu -28 284 1 1266 139 13 21 chr10 19093857 19094094 -121222671 + L1MB3 LINE L1 5908 6142 -41 2290 117 0 0 chr10 19094094 19094394 -121222371 + AluSx SINE Alu 1 300 -12 2202 136 0 0 chr10 19094523 19094831 -121221934 + AluSx SINE Alu 1 308 -4 1104 196 32 0 chr10 19094831 19095051 -121221714 + AluJo SINE Alu 86 312 0 663 217 114 53 chr10 19095356 19095655 -121221110 + Charlie7 DNA MER1_type 323 639 -1973 429 211 62 16 chr10 19095675 19095803 -121220962 - MIR SINE MIR -20 242 109 298 188 0 0 chr10 19095861 19095909 -121220856 + Charlie7 DNA MER1_type 642 689 -1923 278 242 0 44 chr10 19095922 19096013 -121220752 + Charlie7 DNA MER1_type 2525 2611 -1 188 260 80 50 chr10 19096047 19096147 -121220618 - MIR3 SINE MIR -103 105 3 1554 171 3 58 chr10 19096870 19097179 -121219586 - AluJo SINE Alu -20 292 1 358 197 40 0 chr10 19097189 19097265 -121219500 - L1MC5 LINE L1 -723 7238 7160 262 358 17 17 chr10 19097317 19097357 -121219408 + Tigger8 DNA MER2_type 2 41 -625 1962 135 36 0 chr10 19097357 19097638 -121219127 - AluSx SINE Alu -21 291 1 262 358 17 17 chr10 19097638 19097717 -121219048 + Tigger8 DNA MER2_type 40 121 -545 2176 197 22 78 chr10 19097782 19098007 -121218758 + L1ME LINE L1 5119 5355 -811 2412 84 3 0 chr10 19098007 19098304 -121218461 - AluY SINE Alu -13 298 1 2176 197 22 78 chr10 19098304 19098587 -121218178 + L1ME LINE L1 5355 5590 -576 1789 137 4 11 chr10 19098587 19098865 -121217900 + AluSx SINE Alu 37 312 0 2176 197 22 78 chr10 19098865 19099079 -121217686 + L1ME LINE L1 5590 5814 -352 1843 139 57 0 chr10 19099219 19099499 -121217266 + AluJb SINE Alu 1 296 -16 516 305 45 0 chr10 19099524 19099701 -121217064 - MIR SINE MIR 0 262 78 2272 74 23 3 chr10 19099849 19100148 -121216617 - AluY SINE Alu -6 305 1 2541 57 0 3 chr10 19100536 19100832 -121215933 + AluY SINE Alu 1 295 -16 732 189 8 0 chr10 19100843 19100975 -121215790 + FLAM_A SINE Alu 1 133 0 369 286 68 48 chr10 19101283 19101489 -121215276 - L2 LINE L2 -101 3212 3003 2381 74 3 6 chr10 19101490 19101802 -121214963 + AluY SINE Alu 1 311 0 450 0 0 0 chr10 19101949 19101999 -121214766 + (TG)n Simple_repeat Simple_repeat 2 51 0 760 174 0 0 chr10 19101999 19102120 -121214645 - FLAM_A SINE Alu -9 124 4 616 165 128 0 chr10 19103013 19103122 -121213643 + FLAM_C SINE Alu 2 124 -19 236 336 92 0 chr10 19103446 19103565 -121213200 - L1ME LINE L1 -5610 460 331 2018 101 7 28 chr10 19104227 19104553 -121212212 - AluY SINE Alu 0 320 1 466 238 144 20 chr10 19104713 19104915 -121211850 + MIR SINE MIR 23 249 -13 614 153 9 36 chr10 19105065 19105176 -121211589 + FLAM_C SINE Alu 25 132 -11 2094 117 0 3 chr10 19105186 19105484 -121211281 + AluSx SINE Alu 1 297 -15 2378 69 10 3 chr10 19105492 19105797 -121210968 + AluY SINE Alu 5 311 0 180 0 0 0 chr10 19106146 19106166 -121210599 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr10 19106394 19106423 -121210342 + GC_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr10 19106900 19106944 -121209821 + GC_rich Low_complexity Low_complexity 1 44 0 696 208 52 13 chr10 19107261 19107415 -121209350 - FRAM SINE Alu -6 160 1 210 150 0 0 chr10 19107534 19107574 -121209191 + (T)n Simple_repeat Simple_repeat 1 40 0 1977 86 8 4 chr10 19107575 19107832 -121208933 - AluSx SINE Alu -54 258 1 369 58 0 0 chr10 19107857 19107909 -121208856 + (TG)n Simple_repeat Simple_repeat 2 53 0 881 95 44 14 chr10 19107921 19108067 -121208698 + LTR7 LTR ERV1 1 199 -251 275 197 53 40 chr10 19108089 19108165 -121208600 + MIR SINE MIR 55 131 -131 520 131 12 0 chr10 19108187 19108271 -121208494 + AluS SINE Alu 225 309 -3 2261 115 3 0 chr10 19108271 19108576 -121208189 + AluSx SINE Alu 1 306 -6 2932 210 124 41 chr10 19108576 19109638 -121207127 + L1ME1 LINE L1 4180 5466 -700 2335 108 0 0 chr10 19109638 19109944 -121206821 + AluSq SINE Alu 1 306 -7 2932 210 124 41 chr10 19109944 19110643 -121206122 + L1ME1 LINE L1 5466 6105 -61 2083 114 21 0 chr10 19110648 19110938 -121205827 + AluSx SINE Alu 1 296 -16 21 36 0 0 chr10 19110980 19111008 -121205757 + AT_rich Low_complexity Low_complexity 1 28 0 421 260 143 0 chr10 19111453 19111607 -121205158 - MIR SINE MIR -66 196 21 2127 122 3 0 chr10 19111998 19112286 -121204479 + AluSx SINE Alu 1 289 -23 2076 69 77 0 chr10 19112485 19112781 -121203984 + AluY SINE Alu 1 311 0 2177 118 0 10 chr10 19112782 19113096 -121203669 - L1PB3 LINE L1 -14 6140 5830 1838 142 52 0 chr10 19113283 19113572 -121203193 - AluSx SINE Alu -8 304 1 1947 221 46 67 chr10 19114421 19114733 -121202032 - L1ME1 LINE L1 -5 6161 5844 694 203 10 99 chr10 19114733 19114804 -121201961 + MER45A DNA AcHobo 4 80 -1501 2181 120 0 0 chr10 19114804 19115105 -121201660 + AluY SINE Alu 1 301 -10 694 203 10 99 chr10 19115105 19115225 -121201540 + MER45A DNA AcHobo 80 178 0 1947 221 46 67 chr10 19115225 19115420 -121201345 - L1ME1 LINE L1 -322 5844 5667 757 185 8 0 chr10 19115420 19115550 -121201215 + FLAM_C SINE Alu 2 132 -1 1947 221 46 67 chr10 19115550 19115651 -121201114 - L1ME1 LINE L1 -499 5667 5565 2382 78 3 0 chr10 19115652 19115945 -121200820 - AluY SINE Alu -17 294 1 1246 188 21 79 chr10 19116267 19116511 -121200254 - L1ME1 LINE L1 -594 5572 5316 1450 146 43 94 chr10 19116511 19116839 -121199926 - AluJo SINE Alu -1 311 1 2092 108 0 11 chr10 19116841 19117127 -121199638 - AluSg SINE Alu -19 291 9 1246 188 21 79 chr10 19117127 19117263 -121199502 - L1ME1 LINE L1 -851 5315 5207 670 164 86 0 chr10 19117268 19117384 -121199381 - FLAM_C SINE Alu -5 138 13 1880 224 20 9 chr10 19117392 19117847 -121198918 - L1ME1 LINE L1 -951 5195 4736 6707 39 6 15 chr10 19117847 19118645 -121198120 - SVA Other Other 0 1386 596 212 175 0 53 chr10 19118721 19118778 -121197987 + T-rich Low_complexity Low_complexity 1 54 0 1416 174 10 84 chr10 19119339 19119650 -121197115 - AluJo SINE Alu -24 288 1 2249 113 0 7 chr10 19120686 19120987 -121195778 + AluSx SINE Alu 1 299 -13 2335 101 3 0 chr10 19121348 19121645 -121195120 + AluSx SINE Alu 3 300 -12 1961 152 0 10 chr10 19122275 19122578 -121194187 - AluJb SINE Alu -12 300 1 2288 98 3 19 chr10 19122941 19123119 -121193646 - AluSx SINE Alu 0 312 140 2141 110 3 35 chr10 19123119 19123436 -121193329 - AluSq SINE Alu -6 307 1 2288 98 3 19 chr10 19123436 19123574 -121193191 - AluSx SINE Alu -172 140 1 184 296 80 0 chr10 19123898 19123986 -121192779 + MIR3 SINE MIR 108 202 -6 2180 130 0 0 chr10 19124679 19124980 -121191785 - AluSx SINE Alu -11 301 1 242 29 29 0 chr10 19125029 19125064 -121191701 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 544 96 0 12 chr10 19125068 19125151 -121191614 - L1PA13 LINE L1 -19 6144 6063 1094 141 13 0 chr10 19125151 19125307 -121191458 - AluSx SINE Alu -154 158 1 4618 86 5 0 chr10 19125395 19125997 -121190768 - L1PA12 LINE L1 -44 6124 5520 1856 158 0 20 chr10 19126427 19126730 -121190035 - AluJb SINE Alu -5 307 11 2098 102 0 41 chr10 19127038 19127364 -121189401 - AluSq SINE Alu 0 314 1 1684 147 51 17 chr10 19128098 19128391 -121188374 + AluJo SINE Alu 1 303 -9 2118 125 3 0 chr10 19128414 19128709 -121188056 - AluSx SINE Alu -16 296 1 297 326 0 23 chr10 19128749 19128881 -121187884 - MIR SINE MIR -132 130 2 375 226 49 123 chr10 19129277 19129429 -121187336 - MIR SINE MIR -40 222 87 1805 171 3 7 chr10 19129429 19129728 -121187037 + AluJo SINE Alu 1 298 -14 375 226 49 123 chr10 19129728 19129779 -121186986 - MIR SINE MIR -175 87 34 2047 141 0 10 chr10 19129867 19130172 -121186593 - AluSx SINE Alu 0 312 11 457 356 24 10 chr10 19130543 19130751 -121186014 + MIR SINE MIR 41 251 -11 208 196 18 18 chr10 19130992 19131048 -121185717 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 437 323 90 0 chr10 19131693 19131882 -121184883 - MIR SINE MIR 0 262 57 1909 39 0 13 chr10 19131892 19132125 -121184640 + AluY SINE Alu 81 310 -1 2795 88 3 0 chr10 19132759 19133122 -121183643 - THE1B LTR MaLR 0 364 1 2288 111 0 3 chr10 19133524 19133830 -121182935 + AluSx SINE Alu 1 305 -7 251 314 83 0 chr10 19134345 19134466 -121182299 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 19134599 19134678 -121182087 - L3 LINE CR1 -972 605 518 565 92 20 0 chr10 19134688 19134786 -121181979 + (TA)n Simple_repeat Simple_repeat 2 101 0 1629 171 55 0 chr10 19134791 19135066 -121181699 - AluJo SINE Alu -22 290 1 1055 167 142 54 chr10 19135321 19135561 -121181204 + AluJo SINE Alu 39 299 -13 564 261 72 43 chr10 19135903 19136110 -121180655 + MIR SINE MIR 2 214 -48 2132 164 28 91 chr10 19136624 19136944 -121179821 - MLT1C LTR MaLR 0 467 187 1973 124 38 7 chr10 19136944 19137234 -121179531 - AluSc SINE Alu -10 299 1 2132 164 28 91 chr10 19137234 19137408 -121179357 - MLT1C LTR MaLR -280 187 4 5204 196 67 76 chr10 19137412 19138793 -121177972 - MLT1C-int LTR MaLR -1 1370 2 2187 183 34 55 chr10 19138801 19139272 -121177493 - MLT1C LTR MaLR -6 461 1 2397 87 0 0 chr10 19139295 19139605 -121177160 + AluSg SINE Alu 1 310 0 1713 143 56 4 chr10 19141368 19141634 -121175131 - AluJo SINE Alu -32 280 1 356 328 30 0 chr10 19141664 19141795 -121174970 - L2 LINE L2 0 3272 3138 2134 132 3 3 chr10 19141867 19142163 -121174602 + AluSx SINE Alu 3 298 -14 4781 183 46 16 chr10 19142844 19144707 -121172058 - L1MB4 LINE L1 -10 6406 4487 537 107 49 0 chr10 19144709 19144831 -121171934 + (TG)n Simple_repeat Simple_repeat 2 129 0 748 214 6 13 chr10 19144831 19144990 -121171775 - L1MB4 LINE L1 -1893 4489 4332 355 267 156 44 chr10 19144997 19145222 -121171543 - L1MB4 LINE L1 -6022 362 113 1979 170 14 24 chr10 19145222 19145420 -121171345 + MER47A DNA MER2_type 1 195 -2128 3322 168 54 87 chr10 19145420 19146232 -121170533 - LTR1 LTR ERV1 0 785 1 1979 170 14 24 chr10 19146232 19146403 -121170362 + MER47A DNA MER2_type 195 366 0 303 317 0 10 chr10 19146404 19146505 -121170260 - L1MB4 LINE L1 -6271 113 14 2231 106 0 0 chr10 19146705 19146998 -121169767 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 19147427 19147449 -121169316 + AT_rich Low_complexity Low_complexity 1 22 0 2132 141 0 3 chr10 19147701 19148014 -121168751 - AluSx SINE Alu 0 312 1 214 198 18 63 chr10 19148526 19148637 -121168128 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19149479 19149514 -121167251 - L3 LINE CR1 -173 1404 1368 186 326 0 41 chr10 19149491 19149589 -121167176 - L3b LINE CR1 -193 1390 1297 * 885 254 10 5 chr10 19149957 19150166 -121166599 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19150200 19150225 -121166540 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19150225 19150523 -121166242 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19150523 19150740 -121166025 - MER33 DNA MER1_type -2356 229 1 1446 161 9 85 chr10 19150999 19151316 -121165449 - AluJb SINE Alu -19 293 1 668 185 22 99 chr10 19151817 19151998 -121164767 + MER63B DNA MER1_type 2 195 -1493 2194 105 0 10 chr10 19151998 19152303 -121164462 - AluSg SINE Alu -8 302 1 668 185 22 99 chr10 19152303 19152325 -121164440 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19152464 19152605 -121164160 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19153072 19153131 -121163634 - L1MC4 LINE L1 -1337 6705 6648 2107 138 0 3 chr10 19153132 19153429 -121163336 - AluJb SINE Alu -15 297 2 602 158 271 0 chr10 19153434 19153567 -121163198 + MER58B DNA MER1_type 173 341 0 4450 69 53 63 chr10 19154170 19154899 -121161866 - SVA Other Other -520 866 145 13834 88 65 5 chr10 19154934 19156952 -121159813 - HERVH LTR ERV1 -5574 2139 1 737 86 0 19 chr10 19156954 19157059 -121159706 - LTR7 LTR ERV1 -2 448 346 2232 106 0 7 chr10 19157389 19157690 -121159075 + AluSx SINE Alu 1 299 -13 254 282 0 64 chr10 19157814 19157892 -121158873 - MIR3 SINE MIR -28 180 108 432 158 197 47 chr10 19158803 19158930 -121157835 - Charlie2 DNA MER1_type -2 2860 2715 2952 257 22 39 chr10 19159119 19159208 -121157557 - L1MEc LINE L1 -2605 3610 3521 981 115 0 0 chr10 19159208 19159338 -121157427 + FLAM_C SINE Alu 1 130 -3 2952 257 22 39 chr10 19159338 19160377 -121156388 - L1MEc LINE L1 -2694 3521 2501 3767 268 61 84 chr10 19160379 19161081 -121155684 - L1MEc LINE L1 -4023 2373 1657 331 127 0 35 chr10 19161081 19161148 -121155617 + MER2 DNA MER2_type 15 79 -164 3767 268 61 84 chr10 19161148 19161490 -121155275 - L1MEc LINE L1 -4739 1657 1309 2255 65 3 55 chr10 19161490 19161797 -121154968 - AluSp SINE Alu -22 291 1 3767 268 61 84 chr10 19161797 19162010 -121154755 - L1MEc LINE L1 -5087 1309 1093 2470 59 0 19 chr10 19162010 19162317 -121154448 - AluY SINE Alu -10 301 1 3767 268 61 84 chr10 19162317 19163023 -121153742 - L1MEc LINE L1 -5303 1093 403 2295 94 3 3 chr10 19163023 19163321 -121153444 - AluSq SINE Alu -15 298 1 3767 268 61 84 chr10 19163321 19163706 -121153059 - L1MEc LINE L1 -5993 403 11 1030 280 97 15 chr10 19163815 19164283 -121152482 + MLT1G1 LTR MaLR 1 557 -38 2406 83 3 0 chr10 19164301 19164601 -121152164 - AluSp SINE Alu -10 303 3 213 286 0 0 chr10 19164674 19164723 -121152042 - L2 LINE L2 -10 3303 3255 316 298 76 19 chr10 19164992 19165150 -121151615 + L2 LINE L2 3147 3313 0 246 362 52 33 chr10 19165144 19165257 -121151508 - L2 LINE L2 -547 2767 2647 * 1645 235 19 21 chr10 19165257 19165631 -121151134 - MLT1A2 LTR MaLR 0 374 2 246 362 52 33 chr10 19165631 19165727 -121151038 - L2 LINE L2 -667 2647 2554 2269 110 0 3 chr10 19165878 19166188 -121150577 - AluSx SINE Alu -3 309 1 38 22 0 0 chr10 19166455 19166500 -121150265 + AT_rich Low_complexity Low_complexity 1 45 0 404 207 149 35 chr10 19167009 19167183 -121149582 - L1ME4a LINE L1 -2 6119 5926 612 165 150 15 chr10 19167326 19167459 -121149306 - MIR SINE MIR -11 251 101 438 296 113 20 chr10 19167459 19167706 -121149059 - L1ME4a LINE L1 -349 5772 5503 1675 48 19 5 chr10 19167749 19167958 -121148807 - AluSx SINE Alu -100 212 1 183 42 0 0 chr10 19170018 19170042 -121146723 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 255 321 143 24 chr10 19170352 19170520 -121146245 + MIR SINE MIR 65 252 -10 961 231 23 14 chr10 19171082 19171298 -121145467 - MER20 DNA MER1_type -1 218 1 21 36 0 0 chr10 19171881 19171909 -121144856 + AT_rich Low_complexity Low_complexity 1 28 0 530 240 8 16 chr10 19171962 19172087 -121144678 + L2 LINE L2 3190 3313 0 532 268 174 13 chr10 19172163 19172398 -121144367 + L2 LINE L2 1888 2160 -1154 842 228 36 36 chr10 19172432 19172656 -121144109 + MIR SINE MIR 2 225 -37 1012 307 14 17 chr10 19172686 19173048 -121143717 + L2 LINE L2 2185 2545 -769 231 269 0 0 chr10 19173053 19173105 -121143660 + LTR30 LTR ERV1 1 52 -670 1397 149 31 9 chr10 19173105 19173333 -121143432 + LTR12 LTR ERV1 53 285 -429 382 200 11 0 chr10 19173334 19173424 -121143341 + LTR30 LTR ERV1 553 643 -79 605 139 0 0 chr10 19173425 19173511 -121143254 + LTR12 LTR ERV1 481 566 -148 725 305 120 38 chr10 19173511 19174020 -121142745 + L2 LINE L2 2540 3125 -188 1724 163 36 7 chr10 19174020 19174321 -121142444 + AluJo SINE Alu 1 310 -2 725 305 120 38 chr10 19174321 19174527 -121142238 + L2 LINE L2 3125 3313 0 825 156 0 8 chr10 19174689 19174811 -121141954 - AluSq/x SINE Alu -190 122 2 190 313 21 21 chr10 19175168 19175264 -121141501 + MIR SINE MIR 107 202 -60 359 346 110 53 chr10 19175285 19175682 -121141083 + L2 LINE L2 2318 2754 -560 2607 65 0 0 chr10 19175682 19175990 -121140775 + AluY SINE Alu 1 308 -3 359 346 110 53 chr10 19175990 19176121 -121140644 + L2 LINE L2 2754 2876 -438 307 162 118 15 chr10 19176192 19176260 -121140505 + MIR SINE MIR 162 236 -26 507 240 98 113 chr10 19177844 19178119 -121138646 + MER21B LTR ERV1 32 302 -561 * 840 206 0 0 chr10 19178118 19178278 -121138487 + ALR/Alpha Satellite centromeric 1 160 -12 542 275 80 69 chr10 19178293 19178438 -121138327 + MER21B LTR ERV1 300 442 -344 1576 193 48 12 chr10 19178438 19178770 -121137995 - MER2 DNA MER2_type 0 344 1 542 275 80 69 chr10 19178770 19179026 -121137739 + MER21B LTR ERV1 442 780 -6 2351 70 0 0 chr10 19179110 19179426 -121137339 - AluY SINE Alu 0 316 1 895 227 33 93 chr10 19180814 19180932 -121135833 - HAL1 LINE L1 -1534 973 849 2226 87 3 3 chr10 19180932 19181219 -121135546 + AluY SINE Alu 16 302 -9 895 227 33 93 chr10 19181219 19181466 -121135299 - HAL1 LINE L1 -1658 849 630 490 204 0 20 chr10 19181474 19181572 -121135193 - L1MEc LINE L1 -2309 4117 4022 2606 187 91 57 chr10 19181572 19182273 -121134492 - MER50 LTR ERV1 0 734 10 4129 224 45 17 chr10 19182274 19183424 -121133341 - L1MEc LINE L1 -2396 4030 2849 1549 147 124 8 chr10 19183426 19183691 -121133074 - AluJb SINE Alu -16 296 1 3746 165 24 42 chr10 19183691 19184368 -121132397 - L1MEc LINE L1 -3948 2478 1938 1708 167 27 10 chr10 19184368 19184667 -121132098 - AluJo SINE Alu -8 304 1 3746 165 24 42 chr10 19184667 19184883 -121131882 - L1MEc LINE L1 -4488 1938 1720 21 0 0 0 chr10 19185100 19185121 -121131644 + AT_rich Low_complexity Low_complexity 1 21 0 1011 191 0 0 chr10 19185509 19185677 -121131088 + FAM SINE Alu 1 168 -7 195 331 194 21 chr10 19186268 19186603 -121130162 + L2 LINE L2 2076 2468 -846 791 256 40 18 chr10 19187500 19187723 -121129042 + MIR SINE MIR 6 233 -29 220 217 0 22 chr10 19188432 19188478 -121128287 + CT-rich Low_complexity Low_complexity 1 45 0 1228 159 53 4 chr10 19188805 19189050 -121127715 + ORSL DNA AcHobo 2 258 -17 726 174 162 0 chr10 19189179 19189346 -121127419 - L1MB3 LINE L1 -9 6174 5981 29 28 0 0 chr10 19189367 19189403 -121127362 + AT_rich Low_complexity Low_complexity 1 36 0 189 107 0 0 chr10 19190141 19190169 -121126596 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 228 241 86 52 chr10 19190194 19190310 -121126455 - L1MC4a LINE L1 -1635 6173 6054 2439 74 0 10 chr10 19191292 19191601 -121125164 - AluY SINE Alu -5 306 1 281 333 91 8 chr10 19191838 19191970 -121124795 - MIR SINE MIR 0 262 120 2024 126 17 0 chr10 19192033 19192326 -121124439 - AluSq SINE Alu -15 298 1 394 301 57 53 chr10 19192438 19192647 -121124118 - L2 LINE L2 -20 3293 3084 1039 251 178 11 chr10 19192843 19193202 -121123563 - L2 LINE L2 -2414 900 482 3115 175 50 38 chr10 19193236 19193952 -121122813 - L1MC2 LINE L1 -55 6289 5565 505 311 105 20 chr10 19193957 19194568 -121122197 - L1MC2 LINE L1 -1115 5031 4369 1907 93 20 96 chr10 19194591 19194934 -121121831 - AluYb8 SINE Alu -1 317 1 385 309 0 25 chr10 19194934 19195096 -121121669 - L2 LINE L2 -1600 1714 1557 365 301 98 30 chr10 19195215 19195348 -121121417 - MIR3 SINE MIR -63 145 4 186 252 243 0 chr10 19196261 19196368 -121120397 - MIR SINE MIR -3 259 127 247 239 0 0 chr10 19198622 19198668 -121118097 + MIR SINE MIR 5 50 -212 185 367 0 0 chr10 19198670 19198730 -121118035 + MIR SINE MIR 201 260 -2 808 231 133 80 chr10 19199158 19199705 -121117060 - MLT1G1 LTR MaLR 0 567 4 2097 136 3 0 chr10 19200127 19200422 -121116343 + AluSx SINE Alu 1 296 -16 447 284 18 0 chr10 19200554 19200663 -121116102 + L2 LINE L2 3150 3260 -12 325 320 0 8 chr10 19201527 19201655 -121115110 - MER94 DNA DNA -4 130 4 26 30 0 0 chr10 19201786 19201819 -121114946 + AT_rich Low_complexity Low_complexity 1 33 0 212 231 0 0 chr10 19202604 19202643 -121114122 + L2 LINE L2 3263 3301 -12 1491 182 38 40 chr10 19202884 19203165 -121113600 - L1MB7 LINE L1 -25 6159 5878 2020 126 7 10 chr10 19203165 19203458 -121113307 - AluSx SINE Alu -20 292 1 1491 182 38 40 chr10 19203458 19203523 -121113242 - L1MB7 LINE L1 -306 5878 5814 * 3575 177 84 21 chr10 19203514 19204469 -121112296 - L1MB2 LINE L1 -4 6167 5148 1088 213 36 115 chr10 19204499 19205115 -121111650 - L1MB2 LINE L1 -2559 3587 3021 * 3429 138 98 44 chr10 19205100 19205321 -121111444 - L1MB3 LINE L1 -1 6182 5974 1626 186 59 3 chr10 19205321 19205611 -121111154 - AluJo SINE Alu -6 306 1 3429 138 98 44 chr10 19205611 19206092 -121110673 - L1MB3 LINE L1 -209 5974 5442 844 245 69 8 chr10 19206105 19206480 -121110285 - L1MB2 LINE L1 -3104 3042 2645 1114 224 162 13 chr10 19207773 19208225 -121108540 - L1ME2 LINE L1 -3 6232 5723 1402 264 44 6 chr10 19208275 19208775 -121107990 - L1ME2 LINE L1 -3265 2950 2432 1396 198 21 11 chr10 19209074 19209357 -121107408 - AluJb SINE Alu -22 290 5 567 266 149 17 chr10 19209418 19209821 -121106944 - L1ME2 LINE L1 -5215 1181 726 21 0 0 0 chr10 19210440 19210461 -121106304 + AT_rich Low_complexity Low_complexity 1 21 0 1370 122 18 62 chr10 19211277 19211702 -121105063 - LTR42 LTR ERVL -11 484 1 2076 117 3 10 chr10 19212278 19212576 -121104189 - AluSg SINE Alu -14 296 1 1936 116 12 61 chr10 19213092 19213419 -121103346 + AluSx SINE Alu 1 311 -1 1847 139 7 7 chr10 19214361 19214662 -121102103 - AluSx SINE Alu -11 301 1 531 258 174 7 chr10 19215653 19215808 -121100957 + MER5A DNA MER1_type 9 189 0 781 216 36 21 chr10 19215925 19216119 -121100646 - MIR3 SINE MIR -9 199 3 2356 55 0 0 chr10 19217136 19217411 -121099354 + AluY SINE Alu 1 275 -36 216 0 0 0 chr10 19217411 19217435 -121099330 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 292 264 9 5 chr10 19217520 19217629 -121099136 - L2 LINE L2 -1 3271 3115 216 184 20 0 chr10 19217640 19217689 -121099076 - MIR SINE MIR -15 247 198 246 283 157 26 chr10 19217717 19217908 -121098857 - L1MDa LINE L1 -4179 2361 2146 691 236 25 19 chr10 19217983 19218140 -121098625 - MIR SINE MIR -92 170 13 447 329 123 18 chr10 19219499 19220004 -121096761 - L1MC4a LINE L1 -1914 5894 5337 400 352 53 11 chr10 19220023 19220287 -121096478 - L1MC4a LINE L1 -861 5285 5011 1211 179 54 8 chr10 19221745 19222053 -121094712 - MLT1A1 LTR MaLR 0 365 8 2006 88 0 33 chr10 19222854 19223128 -121093637 - AluSq SINE Alu -48 265 1 25 0 0 0 chr10 19223668 19223693 -121093072 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr10 19224612 19224645 -121092120 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 19226275 19226305 -121090460 + AT_rich Low_complexity Low_complexity 1 30 0 426 326 132 10 chr10 19226377 19226681 -121090084 - L1ME LINE L1 -297 5824 5484 901 194 148 5 chr10 19227321 19227517 -121089248 + MER58A DNA MER1_type 1 224 0 741 275 18 18 chr10 19227517 19227738 -121089027 + Charlie2 DNA MER1_type 68 288 -2574 922 220 153 3 chr10 19227762 19228044 -121088721 + Charlie2 DNA MER1_type 1855 2178 -684 * 1092 231 176 12 chr10 19228042 19228532 -121088233 + Charlie2 DNA MER1_type 2287 2856 -6 2333 100 0 3 chr10 19228627 19228937 -121087828 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 19229320 19229341 -121087424 + AT_rich Low_complexity Low_complexity 1 21 0 830 163 0 0 chr10 19229996 19230125 -121086640 - FRAM SINE Alu -16 160 32 1592 156 22 18 chr10 19231690 19231992 -121084773 + AluJb SINE Alu 6 308 0 269 235 90 57 chr10 19232170 19232271 -121084494 + MER5A DNA MER1_type 18 127 -51 1325 226 0 3 chr10 19232271 19232576 -121084189 - AluY SINE Alu -5 306 3 269 235 90 57 chr10 19232576 19232630 -121084135 + MER5A DNA MER1_type 127 178 0 2292 84 0 3 chr10 19233027 19233348 -121083417 + AluY SINE Alu 1 311 0 2130 78 29 46 chr10 19233778 19234085 -121082680 - AluY SINE Alu -8 303 2 23 33 0 0 chr10 19234384 19234414 -121082351 + AT_rich Low_complexity Low_complexity 1 30 0 2041 173 34 32 chr10 19234942 19235490 -121081275 + MLT2A2 LTR ERVL 1 554 0 48 88 0 0 chr10 19235971 19236096 -121080669 + AT_rich Low_complexity Low_complexity 1 125 0 1089 120 20 0 chr10 19236151 19236301 -121080464 - AluSg/x SINE Alu -16 294 142 317 24 0 0 chr10 19236301 19236342 -121080423 + MADE1 DNA Mariner 40 80 0 24 32 0 0 chr10 19236342 19236373 -121080392 + AT_rich Low_complexity Low_complexity 1 31 0 1743 126 59 0 chr10 19236801 19237071 -121079694 - AluSx SINE Alu -20 292 7 371 260 104 46 chr10 19237538 19237711 -121079054 - MIR SINE MIR -3 259 77 1887 168 3 0 chr10 19237842 19238140 -121078625 - AluJo SINE Alu -13 299 1 2345 87 3 0 chr10 19238804 19239102 -121077663 + AluSq SINE Alu 1 299 -14 2045 155 18 18 chr10 19239289 19239624 -121077141 - MER1B DNA MER1_type 0 337 3 890 224 17 0 chr10 19240603 19240782 -121075983 - L1PA12 LINE L1 -4 6164 5983 509 261 133 18 chr10 19240907 19241133 -121075632 - MIR SINE MIR -1 261 10 206 32 32 0 chr10 19241338 19241369 -121075396 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1927 122 37 0 chr10 19241369 19241639 -121075126 - AluSx SINE Alu -32 280 1 243 61 0 0 chr10 19241829 19241862 -121074903 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 19242186 19242210 -121074555 + AT_rich Low_complexity Low_complexity 1 24 0 572 168 32 21 chr10 19242593 19242613 -121074152 + MER58A DNA MER1_type 30 48 -2372 2508 52 0 23 chr10 19242613 19242922 -121073843 - AluY SINE Alu -8 303 2 572 168 32 21 chr10 19242922 19243060 -121073705 + MER58A DNA MER1_type 48 224 0 291 345 65 52 chr10 19245228 19245518 -121071247 + L2 LINE L2 2976 3269 -3 202 239 43 0 chr10 19246120 19246166 -121070599 - L2 LINE L2 -20 3252 3205 21 0 0 0 chr10 19246212 19246233 -121070532 + AT_rich Low_complexity Low_complexity 1 21 0 649 263 143 0 chr10 19246848 19247072 -121069693 - MIR SINE MIR 0 262 7 215 276 17 0 chr10 19247472 19247530 -121069235 - L2 LINE L2 -1484 1830 1772 236 273 151 29 chr10 19247546 19247718 -121069047 - L2 LINE L2 -1744 1570 1378 * 1353 272 121 79 chr10 19247713 19249032 -121067733 + L2 LINE L2 1847 3222 -91 200 286 0 0 chr10 19249127 19249176 -121067589 + L2 LINE L2 3220 3268 -4 222 118 0 0 chr10 19250122 19250156 -121066609 + (TA)n Simple_repeat Simple_repeat 2 35 0 838 268 47 37 chr10 19251064 19251363 -121065402 + AluSp SINE Alu 2 303 0 647 103 0 0 chr10 19251949 19252036 -121064729 + L1PA5 LINE L1 10 96 -6365 * 39527 68 3 3 chr10 19252021 19257878 -121058887 + L1PA5 LINE L1 612 6469 0 27 0 0 0 chr10 19257878 19257905 -121058860 + AT_rich Low_complexity Low_complexity 1 27 0 604 313 50 5 chr10 19259025 19259238 -121057527 - MIR SINE MIR -6 256 36 1966 108 73 3 chr10 19259316 19259604 -121057161 - AluSx SINE Alu -4 308 1 760 221 53 33 chr10 19259708 19259936 -121056829 - MIR SINE MIR 0 262 38 1875 110 11 0 chr10 19260457 19260721 -121056044 - AluSx SINE Alu -4 308 42 220 309 0 0 chr10 19260767 19260822 -121055943 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19260891 19261353 -121055412 - LTR16C LTR ERVL -2 489 1 2326 103 6 6 chr10 19261604 19261915 -121054850 + AluSx SINE Alu 1 311 -1 201 363 71 0 chr10 19262108 19262221 -121054544 + L2 LINE L2 3193 3313 0 330 307 243 30 chr10 19262922 19263165 -121053600 - L2 LINE L2 -1 3312 3122 1936 140 34 0 chr10 19263165 19263458 -121053307 + AluSx SINE Alu 1 303 -9 330 307 243 30 chr10 19263458 19263576 -121053189 - L2 LINE L2 -191 3122 2874 992 218 5 5 chr10 19263679 19263885 -121052880 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19263886 19263991 -121052774 - MER67C LTR ERV1 -374 336 226 348 24 0 0 chr10 19264088 19264129 -121052636 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 168 10 89 chr10 19264166 19264299 -121052466 - MLT2D LTR ERVL -48 366 224 1923 157 3 6 chr10 19264299 19264611 -121052154 + AluJo SINE Alu 1 311 -1 1801 168 10 89 chr10 19264611 19264869 -121051896 - MLT2D LTR ERVL -190 224 6 228 364 10 0 chr10 19264914 19265013 -121051752 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 19265915 19266053 -121050712 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 19266059 19266149 -121050616 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 19266447 19266468 -121050297 + AT_rich Low_complexity Low_complexity 1 21 0 1821 169 10 7 chr10 19266981 19267276 -121049489 + AluJo SINE Alu 3 298 -14 31 0 0 0 chr10 19269424 19269455 -121047310 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 19269524 19269708 -121047057 - MER5A DNA MER1_type -1 188 11 1513 199 29 0 chr10 19270099 19270380 -121046385 + AluJo SINE Alu 4 292 -20 199 194 81 0 chr10 19270739 19270801 -121045964 - MIR SINE MIR -3 259 193 2082 116 3 13 chr10 19270825 19271127 -121045638 - AluSx SINE Alu -1 311 13 215 322 76 25 chr10 19271544 19271662 -121045103 + L3 LINE CR1 1442 1565 -12 357 24 0 0 chr10 19272010 19272052 -121044713 + (A)n Simple_repeat Simple_repeat 1 42 0 2311 77 3 0 chr10 19272713 19273011 -121043754 - AluY SINE Alu -12 299 1 2121 121 0 0 chr10 19274756 19275066 -121041699 - AluSx SINE Alu 0 312 3 1887 131 0 58 chr10 19275712 19276025 -121040740 - AluJb SINE Alu -17 295 1 481 201 38 72 chr10 19276157 19276366 -121040399 + Charlie4 DNA MER1_type 1754 1955 -6 287 333 0 0 chr10 19276367 19276436 -121040329 - L2 LINE L2 -47 3225 3157 330 67 0 0 chr10 19276525 19276570 -121040195 + (TG)n Simple_repeat Simple_repeat 2 46 0 228 364 30 43 chr10 19276584 19276688 -121040077 - L2 LINE L2 -472 2842 2738 1058 181 5 11 chr10 19276688 19276876 -121039889 - L1MB3 LINE L1 0 6183 5997 228 364 30 43 chr10 19276876 19277002 -121039763 - L2 LINE L2 -576 2738 2615 744 273 74 25 chr10 19277004 19277371 -121039394 - L2 LINE L2 -839 2475 2091 2544 122 8 0 chr10 19277634 19277987 -121038778 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 19278156 19278187 -121038578 + AT_rich Low_complexity Low_complexity 1 31 0 2452 68 0 0 chr10 19278187 19278480 -121038285 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 19279861 19279917 -121036848 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 19280402 19280514 -121036251 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 19280554 19280586 -121036179 + AT_rich Low_complexity Low_complexity 1 32 0 1640 263 64 45 chr10 19280620 19281134 -121035631 - L1ME3A LINE L1 -153 6017 5487 2054 113 0 13 chr10 19281134 19281434 -121035331 - AluSx SINE Alu -15 297 2 1640 263 64 45 chr10 19281434 19281542 -121035223 - L1ME3A LINE L1 -683 5487 5383 728 280 138 58 chr10 19281543 19281827 -121034938 - L1ME3A LINE L1 -817 5329 5069 1831 176 0 0 chr10 19281827 19282142 -121034623 - AluSx SINE Alu 0 315 1 728 280 138 58 chr10 19282142 19282549 -121034216 - L1ME3A LINE L1 -1077 5069 4581 248 186 17 0 chr10 19282561 19282620 -121034145 + CT-rich Low_complexity Low_complexity 3 62 0 1877 135 7 11 chr10 19282624 19282898 -121033867 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 19282905 19283058 -121033707 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 19283066 19283371 -121033394 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 19284450 19284585 -121032180 + AluJo SINE Alu 1 136 -176 647 223 0 23 chr10 19285260 19285390 -121031375 - FLAM_A SINE Alu -6 127 1 2017 103 44 0 chr10 19285541 19285836 -121030929 - AluSx SINE Alu 0 307 1 213 39 0 0 chr10 19287268 19287294 -121029471 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1399 129 0 0 chr10 19287311 19287504 -121029261 - AluSx SINE Alu -115 197 5 3743 145 14 47 chr10 19288473 19289106 -121027659 - LTR9 LTR ERV1 0 612 1 2234 113 0 25 chr10 19289253 19289573 -121027192 + AluSx SINE Alu 1 312 0 2085 121 13 0 chr10 19290242 19290548 -121026217 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 19290580 19290701 -121026064 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 19291383 19291563 -121025202 - L1ME LINE L1 -456 5665 5485 309 244 22 68 chr10 19292167 19292303 -121024462 + MER5B DNA MER1_type 29 164 -25 600 229 19 45 chr10 19292322 19292479 -121024286 + MER5B DNA MER1_type 1 153 -25 263 380 28 28 chr10 19292519 19292872 -121023893 - L2 LINE L2 -1879 1435 1083 201 267 143 19 chr10 19293068 19293173 -121023592 + MER5B DNA MER1_type 60 177 -1 820 225 6 0 chr10 19294155 19294324 -121022441 - AluJb SINE Alu -10 302 133 2789 72 3 53 chr10 19294542 19294916 -121021849 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19295422 19295544 -121021221 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19295855 19295891 -121020874 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19295939 19296052 -121020713 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19296267 19296398 -121020367 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19296740 19296955 -121019810 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19297250 19297293 -121019472 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19297398 19297539 -121019226 + AluJo SINE Alu 2 88 -214 2319 77 3 10 chr10 19297539 19297850 -121018915 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19297850 19298045 -121018720 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19298092 19298221 -121018544 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19298223 19298315 -121018450 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19298337 19298371 -121018394 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19298766 19298821 -121017944 + L2 LINE L2 2762 2816 -498 630 223 37 78 chr10 19298848 19298962 -121017803 + MIR SINE MIR 38 139 -123 1613 174 3 43 chr10 19298962 19299261 -121017504 + AluJo SINE Alu 1 287 -25 630 223 37 78 chr10 19299261 19299365 -121017400 + MIR SINE MIR 139 246 -16 207 338 113 15 chr10 19299375 19299579 -121017186 + L2 LINE L2 2837 3060 -212 1827 160 3 3 chr10 19299901 19300183 -121016582 - AluSx SINE Alu -27 285 4 2046 113 13 7 chr10 19301280 19301581 -121015184 - AluSx SINE Alu -9 303 1 27 49 0 0 chr10 19301967 19302008 -121014757 + AT_rich Low_complexity Low_complexity 1 41 0 492 211 82 34 chr10 19302300 19302447 -121014318 + MER117 DNA MER1_type 1 154 -43 2131 106 0 3 chr10 19302678 19303014 -121013751 - AluSq SINE Alu 0 335 1 406 230 105 47 chr10 19303636 19303827 -121012938 - L2 LINE L2 0 3313 3112 394 362 49 21 chr10 19304052 19304240 -121012525 - MER5A DNA MER1_type 0 178 1 327 267 107 15 chr10 19304276 19304407 -121012358 + MIR SINE MIR 2 144 -118 2214 105 6 13 chr10 19304854 19305167 -121011598 + AluSq SINE Alu 3 313 0 252 0 0 0 chr10 19305777 19305805 -121010960 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1620 134 111 4 chr10 19305815 19306077 -121010688 - AluJb SINE Alu -22 290 1 359 312 50 22 chr10 19306188 19306352 -121010413 - MIR SINE MIR -62 146 9 803 177 0 0 chr10 19306869 19306993 -121009772 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19307232 19307260 -121009505 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19307261 19307354 -121009411 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19307482 19307511 -121009254 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19307702 19307835 -121008930 + FLAM_A SINE Alu 1 132 -1 2048 99 4 4 chr10 19309118 19309391 -121007374 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr10 19309438 19309459 -121007306 + AT_rich Low_complexity Low_complexity 1 21 0 42588 39 0 3 chr10 19309915 19315015 -121001750 - L1PA3 LINE L1 -1062 5084 2 8092 24 0 0 chr10 19315017 19316055 -121000710 + L1PA3 LINE L1 5104 6141 -14 619 202 22 45 chr10 19316910 19317088 -120999677 - Charlie7 DNA MER1_type -1 2611 2438 288 324 20 0 chr10 19317079 19317181 -120999584 - Charlie7 DNA MER1_type -2507 105 2 * 326 272 48 16 chr10 19317290 19317415 -120999350 - L1MC4 LINE L1 -10 8032 7904 256 284 128 28 chr10 19317555 19317837 -120998928 - L1MC4 LINE L1 -227 7815 7506 259 319 140 41 chr10 19317903 19318195 -120998570 + MARNA DNA Mariner 12 332 -254 22 56 0 0 chr10 19320046 19320082 -120996683 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 19323300 19323328 -120993437 + AT_rich Low_complexity Low_complexity 1 28 0 364 219 50 106 chr10 19324080 19324201 -120992564 + Charlie8 DNA MER1_type 45 157 -184 2282 57 7 0 chr10 19324201 19324508 -120992257 + AluY SINE Alu 1 309 0 364 219 50 106 chr10 19324508 19324545 -120992220 + Charlie8 DNA MER1_type 157 195 -146 2248 93 3 0 chr10 19324645 19324934 -120991831 - AluSp SINE Alu -23 290 1 1243 187 137 20 chr10 19324938 19325281 -120991484 - MER31B LTR ERV1 -44 422 40 779 158 141 5 chr10 19325382 19325566 -120991199 + Charlie5 DNA MER1_type 32 240 -2372 339 244 0 12 chr10 19325566 19325648 -120991117 + Charlie5 DNA MER1_type 2505 2585 -27 756 235 6 6 chr10 19325692 19325858 -120990907 + MLT1E LTR MaLR 1 166 -427 1232 152 66 0 chr10 19325874 19326071 -120990694 + MLT1E LTR MaLR 377 586 -7 915 154 40 0 chr10 19326124 19326273 -120990492 + L1PA15 LINE L1 5992 6146 -19 2178 117 0 0 chr10 19326284 19326583 -120990182 + AluSx SINE Alu 1 299 -13 890 206 143 5 chr10 19326821 19327044 -120989721 + HERVL40 LTR ERVL 5277 5530 0 1486 249 83 9 chr10 19327045 19327491 -120989274 + LTR40a LTR ERVL 2 480 -39 249 187 80 27 chr10 19327753 19327798 -120988967 + MIR3 SINE MIR 105 157 -51 1953 130 3 54 chr10 19327798 19328148 -120988617 + AluSq SINE Alu 1 313 0 249 187 80 27 chr10 19328148 19328177 -120988588 + MIR3 SINE MIR 157 183 -25 190 339 0 0 chr10 19328212 19328274 -120988491 - L2 LINE L2 -1 3312 3251 * 620 236 191 0 chr10 19328242 19328441 -120988324 - MIR SINE MIR -25 237 1 183 310 95 26 chr10 19328452 19328568 -120988197 - L2 LINE L2 -6 3307 3184 338 221 74 0 chr10 19329271 19329366 -120987399 - LTR33 LTR ERVL -307 214 113 209 236 70 108 chr10 19330203 19330360 -120986405 + MER5A DNA MER1_type 39 189 0 2018 113 20 30 chr10 19330544 19330844 -120985921 - AluSx SINE Alu -15 297 1 196 221 44 59 chr10 19331120 19331188 -120985577 - L2 LINE L2 -3169 145 79 888 152 0 23 chr10 19331406 19331538 -120985227 - FLAM_A SINE Alu -4 129 1 3026 185 16 4 chr10 19332045 19332596 -120984169 + MER68 LTR ERV1 5 562 0 731 225 75 21 chr10 19332810 19333223 -120983542 + LTR54 LTR ERV1 1 495 -15 1407 170 9 0 chr10 19333223 19333452 -120983313 - AluJo SINE Alu -17 295 65 207 0 0 0 chr10 19333517 19333540 -120983225 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1483 161 25 49 chr10 19333544 19333829 -120982936 + AluJo SINE Alu 14 291 -21 2184 112 0 7 chr10 19333836 19334131 -120982634 + AluSq SINE Alu 3 295 -18 696 289 128 22 chr10 19334137 19334540 -120982225 - L2 LINE L2 -90 3223 2761 2158 115 3 0 chr10 19334721 19335009 -120981756 + AluSx SINE Alu 1 289 -23 913 163 62 0 chr10 19335122 19335282 -120981483 - AluSp SINE Alu -9 304 135 1559 166 4 4 chr10 19385681 19385928 -120930837 + AluSx SINE Alu 39 285 -27 256 227 93 0 chr10 19386464 19386539 -120930226 - MIR SINE MIR -16 246 165 1228 148 5 63 chr10 19386568 19386791 -120929974 - AluJo SINE Alu -25 287 78 1930 164 3 0 chr10 19387227 19387525 -120929240 + AluJo SINE Alu 1 299 -13 313 266 104 46 chr10 19387656 19387829 -120928936 + MIR SINE MIR 77 259 -3 214 155 52 0 chr10 19388191 19388249 -120928516 + GA-rich Low_complexity Low_complexity 5 65 0 1055 167 142 54 chr10 19388602 19388842 -120927923 + AluJo SINE Alu 39 299 -13 504 261 72 43 chr10 19389184 19389391 -120927374 + MIR SINE MIR 2 214 -48 251 314 83 0 chr10 19390114 19390235 -120926530 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 19390368 19390447 -120926318 - L3 LINE CR1 -972 605 518 532 87 22 0 chr10 19390457 19390549 -120926216 + (TA)n Simple_repeat Simple_repeat 2 95 0 1171 175 55 33 chr10 19390554 19390828 -120925937 - AluJo SINE Alu -22 290 11 2022 100 7 34 chr10 19391538 19391829 -120924936 - AluSg SINE Alu -24 286 4 278 328 25 25 chr10 19392655 19392777 -120923988 - MIR SINE MIR -121 141 20 2098 62 4 0 chr10 19392946 19393205 -120923560 + AluY SINE Alu 35 294 -17 2054 129 0 0 chr10 19394738 19395046 -120921719 - AluSx SINE Alu 0 312 5 1663 154 0 26 chr10 19395172 19395445 -120921320 - AluJb SINE Alu -36 276 11 2079 102 0 41 chr10 19395753 19396095 -120920670 - AluSq SINE Alu 0 330 1 1670 147 51 17 chr10 19396830 19397123 -120919642 + AluJo SINE Alu 1 303 -9 2120 122 3 0 chr10 19397146 19397441 -120919324 - AluSx SINE Alu -16 296 1 333 326 0 23 chr10 19397481 19397613 -120919152 - MIR SINE MIR -132 130 2 392 243 66 59 chr10 19398009 19398161 -120918604 - MIR SINE MIR -40 222 70 1306 168 15 27 chr10 19398161 19398423 -120918342 + AluJo SINE Alu 1 259 -53 1500 147 35 12 chr10 19398551 19398810 -120917955 - AluSx SINE Alu -37 275 11 513 359 24 9 chr10 19399181 19399393 -120917372 + MIR SINE MIR 41 255 -7 208 196 18 18 chr10 19399630 19399686 -120917079 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 492 323 90 0 chr10 19400331 19400520 -120916245 - MIR SINE MIR 0 262 57 1894 39 0 13 chr10 19400530 19400763 -120916002 + AluY SINE Alu 81 310 -1 302 317 35 42 chr10 19401006 19401148 -120915617 - L1M LINE L1 -2412 5396 5256 2941 88 3 0 chr10 19401398 19401761 -120915004 - THE1B LTR MaLR 0 364 1 541 152 33 11 chr10 19402162 19402254 -120914511 + AluSx SINE Alu 2 95 -218 2046 113 13 7 chr10 19402691 19402992 -120913773 + AluSx SINE Alu 1 303 -9 2223 110 0 28 chr10 19404089 19404406 -120912359 + AluSx SINE Alu 4 311 -1 1609 90 42 0 chr10 19404559 19404771 -120911994 + AluSx SINE Alu 72 292 -20 24 32 0 0 chr10 19405201 19405232 -120911533 + AT_rich Low_complexity Low_complexity 1 31 0 326 24 0 0 chr10 19405232 19405273 -120911492 - MADE1 DNA Mariner 0 80 40 1091 120 20 0 chr10 19405273 19405423 -120911342 + AluSg/x SINE Alu 144 296 -16 48 88 0 0 chr10 19405478 19405603 -120911162 + AT_rich Low_complexity Low_complexity 1 125 0 2086 171 34 32 chr10 19406084 19406632 -120910133 - MLT2A2 LTR ERVL 0 554 1 31 0 0 0 chr10 19408884 19408915 -120907850 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 19408984 19409168 -120907597 - MER5A DNA MER1_type -1 188 11 199 194 81 0 chr10 19409723 19409785 -120906980 - MIR SINE MIR -3 259 193 2065 114 3 13 chr10 19409809 19410107 -120906658 - AluSx SINE Alu -2 310 16 215 322 76 25 chr10 19410530 19410648 -120906117 + L3 LINE CR1 1442 1565 -12 204 111 0 0 chr10 19410983 19411019 -120905746 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr10 19411677 19411699 -120905066 + AT_rich Low_complexity Low_complexity 1 22 0 458 129 119 0 chr10 19411820 19411921 -120904844 - AluSp SINE Alu -200 113 1 758 200 131 0 chr10 19411922 19412097 -120904668 - L1PB4 LINE L1 -2 6154 5957 1726 198 0 0 chr10 19412273 19412608 -120904157 + AluJo SINE Alu 3 337 0 544 171 0 0 chr10 19412982 19413070 -120903695 - MLT2D LTR ERVL -321 93 6 228 364 10 0 chr10 19413115 19413214 -120903551 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 19414116 19414254 -120902511 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 19414260 19414350 -120902415 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 19414647 19414668 -120902097 + AT_rich Low_complexity Low_complexity 1 21 0 1496 179 12 0 chr10 19415181 19415421 -120901344 + AluJo SINE Alu 3 245 -67 373 333 44 39 chr10 19415945 19416125 -120900640 + L1ME LINE L1 5485 5665 -456 301 306 0 25 chr10 19416807 19416928 -120899837 + L1ME LINE L1 5699 5816 -305 2085 121 13 0 chr10 19416960 19417266 -120899499 + AluSx SINE Alu 1 310 -2 3091 151 14 54 chr10 19417926 19418502 -120898263 + LTR9 LTR ERV1 60 612 0 1399 129 0 0 chr10 19419471 19419664 -120897101 + AluSx SINE Alu 5 197 -115 213 39 0 0 chr10 19419681 19419707 -120897058 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1620 134 111 4 chr10 19420704 19420966 -120895799 + AluJb SINE Alu 1 290 -22 252 0 0 0 chr10 19420976 19421004 -120895761 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2246 105 3 10 chr10 19421737 19422050 -120894715 - AluSq SINE Alu 0 313 3 362 265 103 7 chr10 19422494 19422630 -120894135 - MIR SINE MIR -112 150 2 416 353 48 27 chr10 19422666 19422854 -120893911 + MER5A DNA MER1_type 1 178 0 406 230 105 47 chr10 19423079 19423270 -120893495 + L2 LINE L2 3112 3313 0 2200 106 0 3 chr10 19423892 19424185 -120892580 + AluSq SINE Alu 1 292 -21 2069 166 30 91 chr10 19424536 19424855 -120891910 - MLT1C LTR MaLR 0 467 187 2058 118 38 3 chr10 19424855 19425144 -120891621 - AluSc SINE Alu -10 299 1 2069 166 30 91 chr10 19425144 19425318 -120891447 - MLT1C LTR MaLR -280 187 4 5129 198 67 77 chr10 19425322 19426704 -120890061 - MLT1C-int LTR MaLR -1 1370 2 2208 181 34 55 chr10 19426712 19427183 -120889582 - MLT1C LTR MaLR -6 461 1 2239 95 3 0 chr10 19427206 19427491 -120889274 + AluSg SINE Alu 1 286 -24 933 219 26 63 chr10 19427655 19427925 -120888840 + Charlie4 DNA MER1_type 35 294 -1667 1874 133 0 63 chr10 19427939 19428256 -120888509 - AluJb SINE Alu -15 297 1 467 203 30 79 chr10 19428388 19428590 -120888175 + Charlie4 DNA MER1_type 1754 1945 -16 23 33 0 0 chr10 19429227 19429257 -120887508 + AT_rich Low_complexity Low_complexity 1 30 0 2123 83 31 24 chr10 19429556 19429846 -120886919 + AluY SINE Alu 2 293 -18 4604 188 41 72 chr10 19430659 19432814 -120883951 - L1MB4 LINE L1 -10 6406 4332 355 267 156 44 chr10 19432821 19433046 -120883719 - L1MB4 LINE L1 -6022 362 113 1979 170 14 24 chr10 19433046 19433244 -120883521 + MER47A DNA MER2_type 1 195 -2128 3313 171 54 84 chr10 19433244 19434053 -120882712 - LTR1 LTR ERV1 0 785 1 1979 170 14 24 chr10 19434053 19434224 -120882541 + MER47A DNA MER2_type 195 366 0 299 317 0 10 chr10 19434225 19434326 -120882439 - L1MB4 LINE L1 -6271 113 14 2231 106 0 0 chr10 19434526 19434819 -120881946 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 19435248 19435270 -120881495 + AT_rich Low_complexity Low_complexity 1 22 0 517 88 0 12 chr10 19435522 19435602 -120881163 - Alu SINE Alu 0 311 233 203 295 133 9 chr10 19435837 19435942 -120880823 + MER5B DNA MER1_type 60 177 -1 841 222 6 0 chr10 19436921 19437092 -120879673 - AluJb SINE Alu -8 304 133 2776 75 3 53 chr10 19437310 19437684 -120879081 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19438191 19438313 -120878452 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19438624 19438660 -120878105 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19438709 19438822 -120877943 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19439037 19439168 -120877597 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19439510 19439725 -120877040 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19440020 19440063 -120876702 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19440168 19440309 -120876456 + AluJo SINE Alu 2 88 -214 2302 80 3 13 chr10 19440309 19440621 -120876144 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19440621 19440816 -120875949 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19440863 19440992 -120875773 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19440994 19441086 -120875679 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19441108 19441142 -120875623 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19441537 19441592 -120875173 + L2 LINE L2 2762 2816 -498 482 239 1 11 chr10 19441619 19441735 -120875030 + MIR SINE MIR 38 151 -62 281 174 0 82 chr10 19441735 19441833 -120874932 + AluJ/FLAM SINE Alu 1 90 -212 226 259 28 25 chr10 19441889 19442213 -120874552 + CT-rich Low_complexity Low_complexity 1 325 0 282 249 23 39 chr10 19442225 19442450 -120874315 + CT-rich Low_complexity Low_complexity 1 221 0 24 0 0 0 chr10 19442658 19442682 -120874083 + AT_rich Low_complexity Low_complexity 1 24 0 243 61 0 0 chr10 19443003 19443036 -120873729 + (CA)n Simple_repeat Simple_repeat 2 34 0 1892 122 37 4 chr10 19443226 19443497 -120873268 + AluSx SINE Alu 1 280 -32 206 32 32 0 chr10 19443497 19443528 -120873237 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 509 261 133 18 chr10 19443733 19443959 -120872806 + MIR SINE MIR 10 261 -1 905 218 17 0 chr10 19444084 19444263 -120872502 + L1PA12 LINE L1 5983 6164 -4 2074 148 18 24 chr10 19445243 19445580 -120871185 + MER1B DNA MER1_type 3 337 0 1832 93 4 12 chr10 19445767 19446024 -120870741 - AluSq SINE Alu -14 299 45 842 170 7 0 chr10 19447199 19447334 -120869431 - AluJo SINE Alu -176 136 1 1711 184 7 3 chr10 19448413 19448718 -120868047 + AluJo SINE Alu 1 306 -6 635 242 26 0 chr10 19448726 19448879 -120867886 + L1ME3A LINE L1 4010 4166 -1980 1877 135 7 11 chr10 19448886 19449160 -120867605 + AluSx SINE Alu 1 273 -39 263 161 18 0 chr10 19449160 19449216 -120867549 + GA-rich Low_complexity Low_complexity 1 57 0 716 281 139 55 chr10 19449237 19449646 -120867119 + L1ME3A LINE L1 4581 4954 -1192 1810 180 0 0 chr10 19449646 19449969 -120866796 + AluSx SINE Alu 1 323 0 716 281 139 55 chr10 19449969 19450249 -120866516 + L1ME3A LINE L1 4954 5329 -817 1643 263 64 45 chr10 19450250 19450358 -120866407 + L1ME3A LINE L1 5383 5487 -683 1993 116 0 17 chr10 19450358 19450659 -120866106 + AluSx SINE Alu 2 297 -15 1643 263 64 45 chr10 19450659 19451173 -120865592 + L1ME3A LINE L1 5487 6017 -153 32 0 0 0 chr10 19451207 19451239 -120865526 + AT_rich Low_complexity Low_complexity 1 32 0 296 268 27 9 chr10 19451279 19451391 -120865374 + L1ME3A LINE L1 6054 6167 -3 235 268 36 0 chr10 19451876 19451932 -120864833 + L2 LINE L2 3244 3301 -12 2391 75 0 3 chr10 19453315 19453609 -120863156 + AluY SINE Alu 1 293 -18 24 32 0 0 chr10 19453609 19453640 -120863125 + AT_rich Low_complexity Low_complexity 1 31 0 2501 128 8 0 chr10 19453809 19454162 -120862603 + L1PA16 LINE L1 5802 6157 -9 759 270 74 25 chr10 19454425 19454792 -120861973 + L2 LINE L2 2091 2475 -839 218 368 33 41 chr10 19454794 19454920 -120861845 + L2 LINE L2 2615 2740 -574 1058 181 5 11 chr10 19454920 19455108 -120861657 + L1MB3 LINE L1 5997 6183 0 218 368 33 41 chr10 19455108 19455223 -120861542 + L2 LINE L2 2740 2854 -460 1655 153 0 0 chr10 19455348 19455589 -120861176 - AluSx SINE Alu -71 241 1 214 198 18 63 chr10 19456101 19456212 -120860553 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19457054 19457089 -120859676 - L3 LINE CR1 -173 1404 1368 180 286 20 61 chr10 19457066 19457164 -120859601 - L3b LINE CR1 -193 1390 1297 * 923 252 5 5 chr10 19457532 19457742 -120859023 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19457776 19457801 -120858964 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19457801 19458099 -120858666 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19458099 19458316 -120858449 - MER33 DNA MER1_type -2356 229 1 1403 164 13 88 chr10 19458575 19458892 -120857873 - AluJb SINE Alu -19 293 1 656 190 22 99 chr10 19459393 19459574 -120857191 + MER63B DNA MER1_type 2 195 -1493 2313 97 0 3 chr10 19459574 19459874 -120856891 - AluSg SINE Alu -11 299 1 656 190 22 99 chr10 19459874 19459896 -120856869 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19460036 19460177 -120856588 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19460644 19460703 -120856062 - L1MC4 LINE L1 -1337 6705 6648 2072 145 0 3 chr10 19460704 19461000 -120855765 - AluJb SINE Alu -17 295 1 577 318 50 5 chr10 19461388 19461601 -120855164 - MIR SINE MIR -6 256 36 1951 103 72 7 chr10 19461679 19461969 -120854796 - AluSx SINE Alu -3 309 1 760 221 53 33 chr10 19462073 19462301 -120854464 - MIR SINE MIR 0 262 38 1819 118 11 0 chr10 19462822 19463085 -120853680 - AluSx SINE Alu -5 307 42 220 309 0 0 chr10 19463131 19463186 -120853579 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19463255 19463717 -120853048 - LTR16C LTR ERVL -2 489 1 2317 103 7 7 chr10 19463968 19464278 -120852487 + AluSx SINE Alu 1 310 -2 201 363 71 0 chr10 19464471 19464584 -120852181 + L2 LINE L2 3193 3313 0 376 302 223 30 chr10 19465285 19465528 -120851237 - L2 LINE L2 -1 3312 3117 1907 132 35 3 chr10 19465528 19465816 -120850949 + AluSx SINE Alu 1 297 -15 376 302 223 30 chr10 19465816 19465940 -120850825 - L2 LINE L2 -196 3117 2874 1008 214 5 5 chr10 19466043 19466249 -120850516 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19466250 19466355 -120850410 - MER67C LTR ERV1 -374 336 226 240 35 0 0 chr10 19466452 19466481 -120850284 + (TG)n Simple_repeat Simple_repeat 2 30 0 1261 193 11 108 chr10 19466518 19466651 -120850114 - MLT2D LTR ERVL -48 366 222 1994 153 0 6 chr10 19466651 19466964 -120849801 + AluJo SINE Alu 1 311 -1 1261 193 11 108 chr10 19466964 19467192 -120849573 - MLT2D LTR ERVL -192 222 40 803 177 0 0 chr10 19467995 19468119 -120848646 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19468359 19468387 -120848378 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19468388 19468481 -120848284 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19468609 19468638 -120848127 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19468806 19468939 -120847826 + FLAM_A SINE Alu 1 132 -1 2153 107 0 23 chr10 19469056 19469364 -120847401 + AluSx SINE Alu 1 301 -11 200 314 14 0 chr10 19469747 19469817 -120846948 + MIR SINE MIR 96 166 -96 265 279 0 0 chr10 19471037 19471105 -120845660 + MER117 DNA MER1_type 107 174 -23 1886 167 0 3 chr10 19471231 19471542 -120845223 - AluSx SINE Alu -1 311 2 2226 99 10 7 chr10 19472666 19472960 -120843805 + AluSg1 SINE Alu 1 295 -14 199 238 95 76 chr10 19473096 19473201 -120843564 - MIR SINE MIR -90 172 66 2219 105 3 7 chr10 19473496 19473800 -120842965 - AluSx SINE Alu -9 303 1 2159 143 8 37 chr10 19473839 19474216 -120842549 - L1PA16 LINE L1 0 6166 5801 198 260 187 24 chr10 19474943 19475066 -120841699 - MIR SINE MIR -78 184 42 2097 132 7 0 chr10 19475193 19475488 -120841277 - AluSx SINE Alu -15 297 1 653 241 91 74 chr10 19475881 19476288 -120840477 - L1MC4a LINE L1 -131 5990 5577 181 279 49 0 chr10 19476550 19476611 -120840154 + MIR SINE MIR 84 147 -115 239 167 0 21 chr10 19476938 19476986 -120839779 + Charlie5 DNA MER1_type 18 64 -2548 204 125 0 0 chr10 19477188 19477220 -120839545 + (T)n Simple_repeat Simple_repeat 1 32 0 205 250 39 0 chr10 19477656 19477708 -120839057 - L2 LINE L2 -29 3243 3190 190 206 122 10 chr10 19477989 19478072 -120838693 - MIR SINE MIR -99 109 14 959 189 0 17 chr10 19478435 19478615 -120838150 + AluJb SINE Alu 135 311 -1 25 83 0 0 chr10 19478779 19478839 -120837926 + AT_rich Low_complexity Low_complexity 1 60 0 857 138 0 15 chr10 19479606 19479736 -120837029 + FLAM_C SINE Alu 1 128 -5 223 167 48 0 chr10 19479957 19479999 -120836766 + L3b LINE CR1 1290 1333 -250 33 56 0 0 chr10 19480568 19480622 -120836143 + AT_rich Low_complexity Low_complexity 1 54 0 294 29 0 0 chr10 19482858 19482893 -120833872 + (TG)n Simple_repeat Simple_repeat 2 36 0 249 291 53 53 chr10 19483163 19483233 -120833532 + MIR SINE MIR 111 180 -82 1706 166 59 3 chr10 19483233 19483541 -120833224 - AluJb SINE Alu 0 312 1 249 291 53 53 chr10 19483541 19483621 -120833144 + MIR SINE MIR 179 261 -1 210 246 0 18 chr10 19483622 19483679 -120833086 + (TTG)n Simple_repeat Simple_repeat 3 58 0 2142 109 0 7 chr10 19483973 19484280 -120832485 - AluSq SINE Alu 0 305 1 230 305 69 38 chr10 19484316 19484447 -120832318 - L2 LINE L2 -1692 1622 1488 2610 52 0 3 chr10 19484579 19484888 -120831877 + AluY SINE Alu 1 308 -3 2314 96 0 3 chr10 19485177 19485480 -120831285 + AluSx SINE Alu 1 302 -10 267 358 128 0 chr10 19486450 19486598 -120830167 - MIR3 SINE MIR -7 201 35 245 238 0 0 chr10 19486872 19486935 -120829830 - MIR SINE MIR -108 154 92 586 293 30 79 chr10 19486978 19487244 -120829521 + L1MEd LINE L1 369 621 -5498 360 271 24 65 chr10 19487428 19487675 -120829090 - L1MEc LINE L1 -4735 1575 1339 2133 141 0 0 chr10 19487784 19488075 -120828690 - AluSg SINE Alu -18 292 2 241 279 85 111 chr10 19488161 19488621 -120828144 - L1MEc LINE L1 -4962 1157 687 1811 171 0 0 chr10 19488621 19488908 -120827857 - AluSx SINE Alu -25 287 1 241 279 85 111 chr10 19488908 19489559 -120827206 - L1MEc LINE L1 -5432 687 73 1807 162 3 23 chr10 19489559 19489868 -120826897 - AluJb SINE Alu -9 303 1 241 279 85 111 chr10 19489868 19489894 -120826871 - L1MEc LINE L1 -6046 73 48 30 21 0 21 chr10 19490297 19490318 -120826447 + AT_rich Low_complexity Low_complexity 1 21 -26 2140 111 0 10 chr10 19490318 19490607 -120826158 + AluSq SINE Alu 1 286 -27 30 21 0 21 chr10 19490607 19490633 -120826132 + AT_rich Low_complexity Low_complexity 21 47 0 217 233 0 0 chr10 19493100 19493143 -120823622 + CT-rich Low_complexity Low_complexity 2 44 0 2095 135 0 0 chr10 19493291 19493587 -120823178 - AluSx SINE Alu -10 302 7 207 286 50 79 chr10 19493734 19493837 -120822928 - MIR SINE MIR -29 233 134 2264 116 7 0 chr10 19493837 19494139 -120822626 + AluSq SINE Alu 1 304 -9 207 286 50 79 chr10 19494139 19494175 -120822590 - MIR SINE MIR -128 134 98 240 289 72 0 chr10 19495345 19495428 -120821337 - MIR SINE MIR -87 175 87 255 170 0 0 chr10 19495557 19495604 -120821161 + GA-rich Low_complexity Low_complexity 1 47 0 182 253 172 92 chr10 19496140 19496227 -120820538 - MER5B DNA MER1_type -50 128 35 512 211 11 22 chr10 19496353 19496533 -120820232 + CT-rich Low_complexity Low_complexity 1 178 0 846 126 6 33 chr10 19496548 19496730 -120820035 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1411 207 25 22 chr10 19496739 19497014 -120819751 - AluJo SINE Alu -36 276 1 216 191 0 0 chr10 19497336 19497383 -120819382 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1626 136 56 70 chr10 19497486 19497860 -120818905 - THE1C LTR MaLR 0 375 7 186 360 0 0 chr10 19502740 19502790 -120813975 - MIR SINE MIR -193 69 20 1977 205 42 36 chr10 19503375 19503873 -120812892 - MLT1D LTR MaLR 0 505 5 190 300 80 20 chr10 19503948 19504048 -120812717 - L3 LINE CR1 -146 1431 1326 5159 100 4 4 chr10 19504562 19505331 -120811434 - L1PB1 LINE L1 -1 6150 5382 2269 123 0 0 chr10 19505539 19505840 -120810925 - AluSx SINE Alu -11 301 1 21 0 0 0 chr10 19505989 19506010 -120810755 + AT_rich Low_complexity Low_complexity 1 21 0 187 120 20 20 chr10 19506359 19506409 -120810356 + (TA)n Simple_repeat Simple_repeat 1 50 0 379 160 77 13 chr10 19506516 19506672 -120810093 + (TA)n Simple_repeat Simple_repeat 2 167 0 367 140 0 35 chr10 19506672 19506753 -120810012 - FLAM_A SINE Alu -70 62 10 21 36 0 0 chr10 19506811 19506839 -120809926 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 19507569 19507591 -120809174 + AT_rich Low_complexity Low_complexity 1 22 0 1007 169 6 0 chr10 19507956 19508116 -120808649 - FRAM SINE Alu -12 164 4 253 247 0 67 chr10 19508177 19508266 -120808499 + MIR3 SINE MIR 125 207 -1 1957 123 3 30 chr10 19508653 19508955 -120807810 - AluSq SINE Alu -19 294 1 284 297 101 27 chr10 19509401 19509549 -120807216 + MIR SINE MIR 103 261 -1 24 53 0 0 chr10 19509736 19509774 -120806991 + AT_rich Low_complexity Low_complexity 1 38 0 316 253 117 93 chr10 19510638 19510800 -120805965 - MIR SINE MIR -60 202 37 1311 150 137 82 chr10 19510963 19511256 -120805509 - AluJo SINE Alu -3 309 1 297 326 257 17 chr10 19511416 19511824 -120804941 + L3 LINE CR1 1070 1575 -2 1812 180 0 3 chr10 19512426 19512710 -120804055 - AluJo SINE Alu -19 293 11 1611 190 0 7 chr10 19513275 19513559 -120803206 - AluJo SINE Alu -30 282 1 2160 130 38 19 chr10 19513716 19514084 -120802681 - THE1C LTR MaLR 0 375 1 268 318 109 18 chr10 19514194 19514304 -120802461 - MER91A DNA MER1_type 0 196 77 191 111 0 22 chr10 19515103 19515148 -120801617 + (CAT)n Simple_repeat Simple_repeat 2 45 0 182 289 0 0 chr10 19515149 19515194 -120801571 - MIR SINE MIR -6 256 212 525 104 0 0 chr10 19515570 19515647 -120801118 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 201 226 0 0 chr10 19515639 19515692 -120801073 + C-rich Low_complexity Low_complexity 6 58 0 * 1992 111 4 0 chr10 19515725 19515987 -120800778 - AluSq SINE Alu -46 267 5 414 195 0 0 chr10 19516364 19516446 -120800319 + MER41A LTR ERV1 387 468 -86 1647 65 0 9 chr10 19516463 19516717 -120800048 + AluY SINE Alu 67 318 0 2143 118 3 10 chr10 19517088 19517392 -120799373 - AluSg SINE Alu -7 303 2 2141 248 20 11 chr10 19517839 19518473 -120798292 - L1MCa LINE L1 -3276 3150 2511 5019 217 92 75 chr10 19518479 19518717 -120798048 - L1MCa LINE L1 -3951 2475 2243 800 159 0 36 chr10 19518717 19518855 -120797910 - FLAM_C SINE Alu 0 133 1 5019 217 92 75 chr10 19518855 19520048 -120796717 - L1MCa LINE L1 -4183 2243 984 3580 128 2 24 chr10 19520048 19520421 -120796344 + MER1A DNA MER1_type 1 361 -2339 2288 64 0 0 chr10 19520421 19520753 -120796012 - AluY SINE Alu 0 334 3 3580 128 2 24 chr10 19520753 19520917 -120795848 + MER1A DNA MER1_type 361 527 0 5019 217 92 75 chr10 19520917 19521917 -120794848 - L1MCa LINE L1 -5442 984 2 2356 87 0 3 chr10 19522019 19522318 -120794447 + AluSc SINE Alu 1 298 -11 273 119 0 0 chr10 19522427 19522469 -120794296 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1846 158 0 4 chr10 19522469 19522748 -120794017 - AluJo SINE Alu -34 278 1 759 127 67 40 chr10 19523660 19523682 -120793083 - L1PA8 LINE L1 0 6172 6152 2354 110 3 0 chr10 19523682 19523992 -120792773 - AluSx SINE Alu -1 311 1 204 40 0 0 chr10 19523996 19524021 -120792744 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 759 127 67 40 chr10 19524021 19524143 -120792622 - L1PA8 LINE L1 -22 6150 6019 1486 167 3 123 chr10 19524184 19524549 -120792216 + AluJb SINE Alu 1 324 0 1606 124 295 3 chr10 19525015 19525361 -120791404 - MER66A LTR ERV1 -5 473 27 722 184 0 0 chr10 19525944 19526058 -120790707 + FLAM_C SINE Alu 3 116 -27 276 100 0 0 chr10 19526058 19526098 -120790667 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 1294 210 59 16 chr10 19526223 19526528 -120790237 - MER58B DNA MER1_type -22 319 2 194 279 15 59 chr10 19527634 19527702 -120789063 - L2 LINE L2 -20 3293 3229 2246 91 10 3 chr10 19529111 19529420 -120787345 + AluSq SINE Alu 1 311 -2 29 60 0 0 chr10 19529685 19529735 -120787030 + AT_rich Low_complexity Low_complexity 1 50 0 2293 95 0 0 chr10 19530702 19530998 -120785767 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr10 19531515 19531543 -120785222 + AT_rich Low_complexity Low_complexity 1 28 0 516 61 0 0 chr10 19532098 19532164 -120784601 + U4 snRNA snRNA 1 66 -79 1518 217 18 39 chr10 19532168 19532680 -120784085 - L1M4c LINE L1 -3643 3001 2556 2195 141 0 0 chr10 19532680 19532992 -120783773 - AluSx SINE Alu 0 312 1 1518 217 18 39 chr10 19532992 19533069 -120783696 - L1M4c LINE L1 -4088 2556 2479 1262 127 0 0 chr10 19533099 19533265 -120783500 + AluSg/x SINE Alu 130 295 -17 825 281 103 20 chr10 19533309 19533878 -120782887 - L1M4c LINE L1 -4406 2419 1675 3183 246 15 36 chr10 19533893 19534756 -120782009 - L1M4c LINE L1 -5697 845 1 685 277 66 16 chr10 19535036 19535278 -120781487 + MIR SINE MIR 9 262 0 1528 108 0 19 chr10 19537569 19537783 -120778982 - AluSc SINE Alu -8 301 92 2225 113 3 0 chr10 19537855 19538166 -120778599 - AluSx SINE Alu 0 312 1 206 136 23 0 chr10 19538384 19538428 -120778337 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr10 19538572 19538596 -120778169 + AT_rich Low_complexity Low_complexity 1 24 0 239 218 23 35 chr10 19539136 19539223 -120777542 + T-rich Low_complexity Low_complexity 1 86 0 2261 113 33 33 chr10 19540827 19541191 -120775574 - THE1B LTR MaLR 0 364 1 2413 97 0 0 chr10 19541497 19541808 -120774957 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr10 19542011 19542034 -120774731 + (CTAG)n Simple_repeat Simple_repeat 1 23 0 273 274 87 58 chr10 19542642 19542850 -120773915 - L2 LINE L2 0 3313 3100 698 214 127 0 chr10 19542868 19542933 -120773832 - MER69 DNA AcHobo 0 2526 2471 1798 157 3 29 chr10 19542933 19543246 -120773519 + AluJo SINE Alu 1 305 -7 698 214 127 0 chr10 19543246 19543391 -120773374 - MER69 DNA AcHobo -55 2471 2288 451 127 0 0 chr10 19543391 19543462 -120773303 - MLT1B LTR MaLR -2 388 318 404 272 11 43 chr10 19543495 19543679 -120773086 + (TATG)n Simple_repeat Simple_repeat 3 180 0 322 273 16 49 chr10 19543705 19543888 -120772877 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 268 208 13 52 chr10 19543923 19544077 -120772688 + (TATG)n Simple_repeat Simple_repeat 2 149 0 299 257 28 28 chr10 19544079 19544188 -120772577 + (TATATG)n Simple_repeat Simple_repeat 4 112 0 226 194 14 69 chr10 19544202 19544346 -120772419 + (TATG)n Simple_repeat Simple_repeat 2 137 0 1633 198 92 9 chr10 19544355 19544693 -120772072 - MLT2D LTR ERVL -48 366 1 1620 220 79 90 chr10 19544693 19545488 -120771277 - MER69 DNA AcHobo -283 2243 1458 559 299 11 75 chr10 19545622 19545665 -120771100 - MER69 DNA AcHobo -593 633 589 1728 89 8 8 chr10 19545665 19545901 -120770864 - AluSq SINE Alu -2 311 76 559 299 11 75 chr10 19545901 19546138 -120770627 - MER69 DNA AcHobo -637 589 371 516 258 69 44 chr10 19546154 19546201 -120770564 + MLT2C1 LTR ERVL 17 61 -353 656 207 7 28 chr10 19546201 19546346 -120770419 + MLT1E3 LTR MaLR 81 222 -402 516 258 69 44 chr10 19546346 19546387 -120770378 + MLT2C1 LTR ERVL 61 254 -160 204 40 0 0 chr10 19546425 19546450 -120770315 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 184 137 39 20 chr10 19546450 19546501 -120770264 + CT-rich Low_complexity Low_complexity 3 54 0 1692 203 0 3 chr10 19546507 19546817 -120769948 - AluJo SINE Alu -3 309 1 245 216 0 94 chr10 19546830 19546934 -120769831 + MLT2C1 LTR ERVL 287 480 -40 225 0 0 0 chr10 19547039 19547064 -120769701 + (TA)n Simple_repeat Simple_repeat 1 25 0 2346 84 0 3 chr10 19547064 19547360 -120769405 - AluSq SINE Alu -18 295 1 1266 165 57 70 chr10 19547380 19547696 -120769069 - MER69 DNA AcHobo -2206 320 9 2312 105 96 0 chr10 19548118 19548450 -120768315 + THE1B LTR MaLR 1 364 0 3249 172 25 73 chr10 19548816 19549542 -120767223 + LTR8 LTR ERV1 1 691 0 240 128 149 0 chr10 19549542 19549589 -120767176 + MER5B DNA MER1_type 79 132 -46 839 210 118 105 chr10 19549654 19550044 -120766721 + MSTD LTR MaLR 2 396 0 369 237 1 23 chr10 19550328 19550420 -120766345 + MSTC LTR MaLR 15 106 -268 21 0 0 0 chr10 19550526 19550547 -120766218 + AT_rich Low_complexity Low_complexity 1 21 0 497 290 16 32 chr10 19551101 19551287 -120765478 - MER5A DNA MER1_type 0 189 7 2990 144 32 22 chr10 19551766 19552259 -120764506 + MER41E LTR ERV1 15 512 0 225 0 0 0 chr10 19552863 19552888 -120763877 + (A)n Simple_repeat Simple_repeat 1 25 0 1119 295 189 18 chr10 19555223 19556156 -120760609 + L2 LINE L2 2207 3303 -10 327 233 83 93 chr10 19556237 19556430 -120760335 - L2 LINE L2 -1257 2057 1867 271 283 66 19 chr10 19556647 19556753 -120760012 + MER5B DNA MER1_type 68 178 0 3759 172 28 31 chr10 19556961 19557308 -120759457 - L1MB3 LINE L1 0 6183 5837 2030 101 74 20 chr10 19557308 19557605 -120759160 - AluSp SINE Alu 0 313 1 3759 172 28 31 chr10 19557605 19558032 -120758733 - L1MB3 LINE L1 -346 5837 5411 2465 86 0 0 chr10 19558189 19558490 -120758275 + AluSc SINE Alu 1 301 -8 2976 153 63 18 chr10 19558610 19558657 -120758108 + LTR49 LTR ERV1 1 44 -551 613 100 0 0 chr10 19558657 19558737 -120758028 - MADE1 DNA Mariner 0 80 1 2976 153 63 18 chr10 19558737 19559207 -120757558 + LTR49 LTR ERV1 44 549 -46 207 0 0 0 chr10 19559207 19559230 -120757535 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2976 153 63 18 chr10 19559230 19559280 -120757485 + LTR49 LTR ERV1 549 595 0 360 302 129 5 chr10 19559496 19559698 -120757067 - MIR SINE MIR -30 232 6 1946 101 22 53 chr10 19559887 19560205 -120756560 - AluSg SINE Alu -2 308 1 1971 146 10 3 chr10 19560258 19560560 -120756205 - AluSx SINE Alu -8 304 1 2182 184 35 79 chr10 19560841 19561323 -120755442 + MLT2B1 LTR ERVL 1 458 -62 2029 148 0 0 chr10 19561323 19561626 -120755139 + AluSx SINE Alu 1 303 -9 2182 184 35 79 chr10 19561626 19561687 -120755078 + MLT2B1 LTR ERVL 458 520 0 291 269 177 39 chr10 19562347 19562477 -120754288 + L2 LINE L2 3100 3247 -25 591 233 89 35 chr10 19562527 19562571 -120754194 - MIR SINE MIR -19 243 203 2066 128 7 0 chr10 19562571 19562868 -120753897 - AluSx SINE Alu -13 299 1 591 233 89 35 chr10 19562868 19563025 -120753740 - MIR SINE MIR -59 203 31 333 274 26 13 chr10 19563489 19563642 -120753123 + (TA)n Simple_repeat Simple_repeat 1 155 0 1644 189 4 4 chr10 19563743 19564024 -120752741 - AluJo SINE Alu -31 281 1 2693 26 0 3 chr10 19564294 19564598 -120752167 + AluY SINE Alu 1 303 -8 233 208 239 31 chr10 19564601 19564760 -120752005 - HAL1 LINE L1 -296 2211 2020 1188 231 224 12 chr10 19564890 19565376 -120751389 - HAL1 LINE L1 -928 1579 991 333 322 55 27 chr10 19565503 19565649 -120751116 - HAL1 LINE L1 -2011 496 347 322 237 237 35 chr10 19565650 19565764 -120751001 - MER63A DNA MER1_type -1 209 73 231 268 129 56 chr10 19565850 19566137 -120750628 - HAL1 LINE L1 -2152 355 48 370 262 177 18 chr10 19566323 19566487 -120750278 - MIR SINE MIR -16 246 57 1881 106 101 53 chr10 19566854 19567212 -120749553 - THE1C LTR MaLR 0 375 1 1372 202 34 81 chr10 19567303 19567759 -120749006 + MLT2B1 LTR ERVL 1 414 0 259 278 69 0 chr10 19567795 19567867 -120748898 - MER91C DNA MER1_type -30 110 34 429 347 47 0 chr10 19568318 19568468 -120748297 - L2 LINE L2 0 3272 3116 220 321 212 52 chr10 19570157 19570525 -120746240 - L2 LINE L2 -18 3254 2828 190 222 0 0 chr10 19570644 19570680 -120746085 - MIR SINE MIR -61 147 112 234 0 0 0 chr10 19570743 19570769 -120745996 + (A)n Simple_repeat Simple_repeat 1 26 0 1892 191 91 0 chr10 19571218 19571579 -120745186 + MSTD LTR MaLR 3 396 0 237 247 187 13 chr10 19571583 19571733 -120745032 - L1ME4a LINE L1 0 6121 5946 613 203 94 22 chr10 19572474 19572612 -120744153 + MLT1E LTR MaLR 22 169 -424 * 1198 206 26 9 chr10 19572609 19572837 -120743928 + MLT1E LTR MaLR 362 593 0 2266 120 0 3 chr10 19573219 19573528 -120743237 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr10 19573731 19573753 -120743012 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 19573843 19573871 -120742894 + AT_rich Low_complexity Low_complexity 1 28 0 12094 99 9 3 chr10 19573961 19575674 -120741091 - L1P LINE L1 -1171 4975 3252 7039 108 19 1 chr10 19575672 19576713 -120740052 + L1P LINE L1 2196 3255 -2891 * 22 0 0 0 chr10 19576719 19576741 -120740024 + AT_rich Low_complexity Low_complexity 1 22 0 198 284 123 12 chr10 19576907 19576988 -120739777 + MIR3 SINE MIR 8 97 -111 5108 148 47 16 chr10 19577429 19578302 -120738463 + MER49 LTR ERV1 15 914 -9 1648 112 0 9 chr10 19578428 19578652 -120738113 + AluSp SINE Alu 79 300 -13 2138 110 0 23 chr10 19578947 19579247 -120737518 + AluSx SINE Alu 1 293 -19 5324 84 132 0 chr10 19579297 19580027 -120736738 - LTR12 LTR ERV1 0 826 1 755 185 44 54 chr10 19580202 19580407 -120736358 - pTR5 LTR ERV1 -1493 945 743 2341 106 0 3 chr10 19581779 19582090 -120734675 - AluSg SINE Alu 0 310 1 296 271 163 23 chr10 19583423 19583552 -120733213 - MER5B DNA MER1_type -1 177 31 2190 112 0 7 chr10 19583553 19583857 -120732908 - AluSg SINE Alu -8 302 1 28 0 0 0 chr10 19584226 19584254 -120732511 + AT_rich Low_complexity Low_complexity 1 28 0 200 265 60 12 chr10 19585301 19585384 -120731381 + MIR SINE MIR 117 203 -59 229 254 0 34 chr10 19585974 19586033 -120730732 - MER5B DNA MER1_type -121 57 1 232 246 46 0 chr10 19587930 19587995 -120728770 + MIR SINE MIR 64 131 -131 21 57 0 0 chr10 19588130 19588165 -120728600 + AT_rich Low_complexity Low_complexity 1 35 0 1800 220 17 98 chr10 19589161 19589751 -120727014 - MER34 LTR ERV1 0 542 1 457 287 138 35 chr10 19589806 19590006 -120726759 - L2 LINE L2 -6 3307 3068 1245 193 49 58 chr10 19590006 19590332 -120726433 + MER33 DNA MER1_type 2 324 0 457 287 138 35 chr10 19590332 19590413 -120726352 - L2 LINE L2 -245 3068 2997 1796 178 0 31 chr10 19592176 19592496 -120724269 + AluJo SINE Alu 1 310 -2 186 353 92 29 chr10 19593432 19593605 -120723160 + L2 LINE L2 458 641 -2673 265 139 70 0 chr10 19593803 19593846 -120722919 + L2 LINE L2 3213 3258 -14 2376 96 0 0 chr10 19594227 19594528 -120722237 + AluSq SINE Alu 1 301 -12 1687 197 3 3 chr10 19595607 19595911 -120720854 - AluJo SINE Alu -6 306 3 927 216 140 56 chr10 19595937 19595990 -120720775 - L1MC5 LINE L1 -284 7677 7630 2238 97 0 13 chr10 19595990 19596288 -120720477 + AluSx SINE Alu 1 294 -18 927 216 140 56 chr10 19596288 19596826 -120719939 - L1MC5 LINE L1 -331 7630 7036 2376 57 0 13 chr10 19596904 19597203 -120719562 + AluY SINE Alu 1 295 -16 31 0 0 0 chr10 19597203 19597234 -120719531 + AT_rich Low_complexity Low_complexity 1 31 0 307 343 39 10 chr10 19597445 19597652 -120719113 - L1 LINE L1 -1899 4247 4035 544 224 31 85 chr10 19597687 19597946 -120718819 - L1M4 LINE L1 -4576 2249 2005 18378 153 39 20 chr10 19597957 19599975 -120716790 - L1MA2 LINE L1 -4 7719 5741 369 0 0 0 chr10 19599975 19600016 -120716749 + (TG)n Simple_repeat Simple_repeat 2 42 0 18378 153 39 20 chr10 19600016 19605554 -120711211 - L1MA2 LINE L1 -1982 5741 16 1404 239 42 71 chr10 19605556 19605717 -120711048 - L1M4 LINE L1 -4779 1867 1703 1966 127 0 27 chr10 19605717 19606016 -120710749 - AluSx SINE Alu -15 297 7 1404 239 42 71 chr10 19606016 19606625 -120710140 - L1M4 LINE L1 -4943 1703 1110 213 402 19 19 chr10 19607632 19607739 -120709026 - L2 LINE L2 -8 3264 3158 730 224 19 6 chr10 19608190 19608346 -120708419 + MER5A DNA MER1_type 32 189 0 1329 186 17 0 chr10 19610851 19611082 -120705683 - MIR SINE MIR -25 237 3 1923 64 113 39 chr10 19612206 19612489 -120704276 + AluY SINE Alu 1 304 -7 1804 173 14 0 chr10 19612500 19612789 -120703976 + AluJo SINE Alu 1 293 -19 2235 99 0 0 chr10 19612793 19613095 -120703670 + AluSg SINE Alu 1 302 0 688 168 74 0 chr10 19613988 19614137 -120702628 - L1MB2 LINE L1 -18 6153 5994 2102 130 10 0 chr10 19614353 19614653 -120702112 + AluSx SINE Alu 1 303 -9 29 78 0 0 chr10 19615077 19615141 -120701624 + AT_rich Low_complexity Low_complexity 1 64 0 1465 155 125 39 chr10 19615619 19615955 -120700810 - MLT1A1 LTR MaLR 0 365 1 1644 215 7 0 chr10 19616015 19616317 -120700448 + AluJo SINE Alu 1 304 -8 1692 168 0 23 chr10 19616336 19616640 -120700125 + AluJo SINE Alu 1 297 -15 913 164 0 0 chr10 19617182 19617328 -120699437 + AluJb SINE Alu 1 146 -166 2041 122 0 0 chr10 19617335 19617605 -120699160 + AluSx SINE Alu 20 289 -23 1408 171 25 22 chr10 19617605 19617880 -120698885 + MSTB LTR MaLR 147 422 -4 484 266 159 14 chr10 19617889 19618242 -120698523 + LTR33 LTR ERVL 45 448 -73 2220 80 28 0 chr10 19618926 19619213 -120697552 + AluSx SINE Alu 1 295 -17 278 271 8 0 chr10 19619565 19619683 -120697082 + (TA)n Simple_repeat Simple_repeat 2 120 0 26 0 0 0 chr10 19620037 19620063 -120696702 + AT_rich Low_complexity Low_complexity 1 26 0 2433 93 0 0 chr10 19621097 19621409 -120695356 + AluSx SINE Alu 1 312 0 22 80 0 0 chr10 19622213 19622263 -120694502 + AT_rich Low_complexity Low_complexity 1 50 0 452 316 75 5 chr10 19625795 19625982 -120690783 - MIR SINE MIR -3 259 60 2403 42 0 78 chr10 19626008 19626342 -120690423 + AluY SINE Alu 4 311 0 243 154 39 0 chr10 19626385 19626437 -120690328 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 205 233 0 0 chr10 19626599 19626642 -120690123 - MIR SINE MIR -37 225 183 865 125 0 0 chr10 19627296 19627416 -120689349 - AluSg/x SINE Alu -18 294 175 2112 116 13 7 chr10 19628306 19628607 -120688158 + AluSx SINE Alu 1 303 -9 1193 194 184 3 chr10 19629276 19629585 -120687180 - MLT1A1 LTR MaLR 0 365 1 2227 116 3 0 chr10 19630521 19630832 -120685933 + AluSx SINE Alu 1 312 0 2452 99 5 27 chr10 19630969 19631371 -120685394 - L1MA2 LINE L1 0 6304 5912 22 0 0 0 chr10 19633519 19633541 -120683224 + AT_rich Low_complexity Low_complexity 1 22 0 3492 97 57 0 chr10 19634002 19634509 -120682256 + L1PA10 LINE L1 5617 6152 -16 315 304 22 22 chr10 19635742 19635877 -120680888 - LTR16C LTR ERVL 0 491 357 3912 103 4 2 chr10 19636729 19637282 -120679483 - MER41A LTR ERV1 0 554 1 3301 98 16 18 chr10 19637420 19637910 -120678855 + MER1A DNA MER1_type 40 528 -1 30 69 0 0 chr10 19638304 19638362 -120678403 + AT_rich Low_complexity Low_complexity 1 58 0 3870 230 85 20 chr10 19638703 19640073 -120676692 + L1M4 LINE L1 2817 4275 -1871 812 172 57 62 chr10 19640188 19640380 -120676385 + AluJb SINE Alu 120 310 -2 189 283 98 11 chr10 19640515 19640607 -120676158 - MIR SINE MIR -13 249 150 216 328 0 0 chr10 19641681 19641748 -120675017 - MIR SINE MIR -12 250 184 259 273 78 0 chr10 19641908 19641985 -120674780 + MIR SINE MIR 47 129 -79 203 167 0 24 chr10 19642123 19642165 -120674600 + GA-rich Low_complexity Low_complexity 2 42 0 3549 149 61 16 chr10 19642409 19643143 -120673622 + LTR1B LTR ERV1 1 785 0 2501 262 195 23 chr10 19643222 19644232 -120672533 - L2 LINE L2 -632 2682 1499 2156 120 10 0 chr10 19644326 19644635 -120672130 - AluSx SINE Alu 0 312 1 704 260 52 45 chr10 19646152 19646608 -120670157 + L1M4c LINE L1 1483 2088 -4475 2016 80 4 7 chr10 19646649 19646923 -120669842 - L1PA8 LINE L1 -3 6169 5897 1464 66 0 0 chr10 19646926 19647123 -120669642 + L1PA8 LINE L1 5682 5878 -294 1174 244 66 15 chr10 19647118 19647782 -120668983 + L1M4c LINE L1 2128 2776 -3606 * 1257 189 56 87 chr10 19649053 19649517 -120667248 - MER66A LTR ERV1 0 478 99 571 218 103 6 chr10 19649656 19649812 -120666953 - MIR SINE MIR -11 251 81 186 191 0 0 chr10 19649839 19649881 -120666884 + (TATATG)n Simple_repeat Simple_repeat 4 45 0 279 190 0 0 chr10 19650048 19650106 -120666659 + GA-rich Low_complexity Low_complexity 3 60 0 233 332 130 39 chr10 19650267 19650475 -120666290 + MIR SINE MIR 7 233 -29 301 279 58 27 chr10 19650757 19651207 -120665558 - L1ME LINE L1 -651 5511 5043 247 349 23 14 chr10 19651213 19651428 -120665337 - L1ME LINE L1 -1134 5012 4796 635 242 8 0 chr10 19651533 19651661 -120665104 - FLAM_A SINE Alu -4 129 1 402 158 53 83 chr10 19651763 19651805 -120664960 - L1ME3A LINE L1 -18 6152 6110 2186 92 0 4 chr10 19651805 19652111 -120664654 + AluSg SINE Alu 1 305 0 402 158 53 83 chr10 19652111 19652200 -120664565 - L1ME3A LINE L1 -60 6110 6024 1833 181 0 0 chr10 19652748 19653047 -120663718 - AluJo SINE Alu -12 300 2 2573 62 3 0 chr10 19653278 19653582 -120663183 + AluY SINE Alu 1 305 -6 272 291 94 55 chr10 19653591 19653718 -120663047 + MIR3 SINE MIR 41 172 -36 220 233 108 50 chr10 19653726 19653781 -120662984 + MIR SINE MIR 132 182 -80 1842 158 44 116 chr10 19653781 19654325 -120662440 + MLT1D LTR MaLR 1 505 0 220 233 108 50 chr10 19654325 19654389 -120662376 + MIR SINE MIR 182 258 -4 234 0 0 0 chr10 19654629 19654655 -120662110 + (TATG)n Simple_repeat Simple_repeat 2 27 0 438 365 39 37 chr10 19654727 19655135 -120661630 + L2 LINE L2 2565 2973 -341 734 234 43 0 chr10 19655399 19655587 -120661178 - MER3 DNA MER1_type -13 196 1 2090 98 26 36 chr10 19655819 19656124 -120660641 - AluSc SINE Alu -7 302 1 295 194 16 0 chr10 19656181 19656243 -120660522 + LTR37A LTR ERV1 116 178 -248 608 231 62 8 chr10 19656272 19656514 -120660251 + LTR37B LTR ERV1 210 464 -4 2214 107 0 10 chr10 19656549 19656847 -120659918 + AluSg1 SINE Alu 1 295 -14 279 26 0 0 chr10 19657162 19657201 -120659564 + LTR37B LTR ERV1 426 464 -4 1647 190 20 3 chr10 19657202 19657323 -120659442 + AluJo SINE Alu 1 118 -194 195 69 0 0 chr10 19657323 19657352 -120659413 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1647 190 20 3 chr10 19657352 19657525 -120659240 + AluJo SINE Alu 118 300 -12 28 48 0 0 chr10 19657952 19657994 -120658771 + AT_rich Low_complexity Low_complexity 1 42 0 326 260 104 19 chr10 19658010 19658164 -120658601 - MER34 LTR ERV1 -19 523 357 1362 114 50 9 chr10 19658247 19658466 -120658299 + MER30 DNA MER1_type 2 229 -1 504 267 41 72 chr10 19660111 19660178 -120656587 - MER5A DNA MER1_type 0 189 121 1775 173 0 26 chr10 19660178 19660484 -120656281 + AluJo SINE Alu 1 298 -14 504 267 41 72 chr10 19660484 19660611 -120656154 - MER5A DNA MER1_type -68 121 1 565 302 104 5 chr10 19662157 19662379 -120654386 + MIR SINE MIR 13 256 -6 183 333 48 0 chr10 19663085 19663148 -120653617 - MIR3 SINE MIR -4 204 139 633 230 53 53 chr10 19663160 19663391 -120653374 - MIR SINE MIR -2 260 29 185 392 29 10 chr10 19663392 19663494 -120653271 - MIR SINE MIR -75 133 30 274 306 20 20 chr10 19663707 19663805 -120652960 + MIR3 SINE MIR 78 175 -33 1599 206 63 25 chr10 19663936 19664378 -120652387 + MLT1C LTR MaLR 6 464 -3 195 129 0 0 chr10 19664382 19664413 -120652352 + (T)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr10 19665733 19665767 -120650998 + AT_rich Low_complexity Low_complexity 1 34 0 504 272 103 5 chr10 19665767 19665951 -120650814 - MIR SINE MIR 0 262 61 280 271 0 0 chr10 19666326 19666385 -120650380 - MER113 DNA MER1_type? -5 516 458 25 31 0 0 chr10 19666493 19666525 -120650240 + AT_rich Low_complexity Low_complexity 1 32 0 230 375 9 0 chr10 19666657 19666769 -120649996 - MIR SINE MIR -1 261 149 243 167 29 98 chr10 19666919 19666953 -120649812 - L1 LINE L1 -1281 4865 4830 1314 236 57 17 chr10 19666953 19667304 -120649461 + MLT1A1 LTR MaLR 1 365 0 243 167 29 98 chr10 19667304 19667371 -120649394 - L1 LINE L1 -1316 4830 4771 * 1582 255 28 39 chr10 19667369 19667677 -120649088 + L1ME3A LINE L1 5151 5461 -709 1410 268 17 28 chr10 19667677 19668143 -120648622 + LTR40b LTR ERVL 2 462 0 1582 255 28 39 chr10 19668143 19668527 -120648238 + L1ME3A LINE L1 5461 5845 -325 283 348 18 0 chr10 19668644 19668756 -120648009 + L2 LINE L2 1552 1665 -1649 841 267 73 13 chr10 19668757 19669072 -120647693 + L1ME3A LINE L1 5837 6170 0 197 305 63 11 chr10 19669446 19669541 -120647224 - MIR SINE MIR -2 260 161 2298 99 0 3 chr10 19670885 19671189 -120645576 + AluSg SINE Alu 1 303 -7 1014 174 122 4 chr10 19671200 19671470 -120645295 + L1MA4 LINE L1 5991 6292 -8 24 32 0 0 chr10 19671471 19671502 -120645263 + AT_rich Low_complexity Low_complexity 1 31 0 2236 109 0 0 chr10 19671769 19672071 -120644694 + AluSx SINE Alu 1 302 -10 2313 206 42 34 chr10 19672389 19673035 -120643730 - L1MB4 LINE L1 -213 5967 5317 4102 188 12 38 chr10 19673041 19673921 -120642844 - L1MC1 LINE L1 -7 6326 5469 1170 129 0 11 chr10 19674021 19674199 -120642566 + AluSg/x SINE Alu 134 309 -3 434 86 0 0 chr10 19674730 19674788 -120641977 + AluYa8 SINE Alu 165 222 -88 28 0 0 0 chr10 19674796 19674824 -120641941 + AT_rich Low_complexity Low_complexity 1 28 0 408 290 11 49 chr10 19675697 19675880 -120640885 - MER69A DNA AcHobo -1 176 1 1212 111 60 18 chr10 19677952 19678169 -120638596 + Tigger2a DNA MER2_type 1 226 -208 195 42 0 0 chr10 19678245 19678269 -120638496 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1889 167 3 0 chr10 19678269 19678557 -120638208 - AluSx SINE Alu -19 293 5 1314 138 45 0 chr10 19678558 19678782 -120637983 + Tigger2a DNA MER2_type 191 424 -10 2291 90 3 3 chr10 19679758 19680057 -120636708 + AluSc SINE Alu 1 299 -10 30 45 0 0 chr10 19680267 19680311 -120636454 + AT_rich Low_complexity Low_complexity 1 44 0 1473 234 19 14 chr10 19680426 19680518 -120636247 - L1MC1 LINE L1 -1105 5041 4951 1672 186 3 14 chr10 19680518 19680842 -120635923 - AluJo SINE Alu 0 321 1 1473 234 19 14 chr10 19680842 19681172 -120635593 - L1MC1 LINE L1 -1195 4951 4616 20851 51 49 3 chr10 19681273 19684132 -120632633 - L1P LINE L1 -3156 2990 1 441 0 0 0 chr10 19684203 19684252 -120632513 + (TA)n Simple_repeat Simple_repeat 1 49 0 1988 144 7 0 chr10 19684252 19684543 -120632222 - AluSq SINE Alu -20 293 1 1691 96 4 8 chr10 19684835 19685085 -120631680 - AluSc SINE Alu -60 249 1 2318 107 3 0 chr10 19685227 19685535 -120631230 - AluSx SINE Alu -3 309 1 181 315 46 54 chr10 19685653 19685783 -120630982 + L3 LINE CR1 598 726 -851 302 286 94 36 chr10 19686145 19686369 -120630396 + L1ME4a LINE L1 5816 6052 -69 21 0 0 0 chr10 19686439 19686460 -120630305 + AT_rich Low_complexity Low_complexity 1 21 0 1633 233 57 35 chr10 19686560 19687067 -120629698 + L1MCa LINE L1 21 538 -5888 1952 114 9 63 chr10 19687580 19687896 -120628869 - AluSq SINE Alu -14 299 1 870 227 72 19 chr10 19688431 19688695 -120628070 + MLT1D LTR MaLR 3 280 -225 3662 179 89 4 chr10 19688701 19689462 -120627303 - LTR1B LTR ERV1 0 826 1 996 201 18 120 chr10 19689462 19689861 -120626904 + MLT1A1 LTR MaLR 3 360 -5 1070 197 9 21 chr10 19689877 19690110 -120626655 + MLT1D LTR MaLR 276 505 0 500 229 136 7 chr10 19690276 19690416 -120626349 - MER99 DNA DNA -3 825 668 * 1927 239 43 9 chr10 19690403 19690943 -120625822 - MER99 DNA DNA -269 559 2 289 287 147 21 chr10 19690944 19691087 -120625678 + MIR SINE MIR 52 212 -50 717 206 55 55 chr10 19691121 19691412 -120625353 + L1M4 LINE L1 5046 5336 -810 2648 169 87 82 chr10 19691427 19692160 -120624605 + L1MC/D LINE L1 51 787 -5639 4969 242 50 28 chr10 19692189 19693816 -120622949 + L1MC/D LINE L1 2781 4452 -1974 186 43 0 0 chr10 19693816 19693839 -120622926 + (GAAAA)n Simple_repeat Simple_repeat 4 26 0 4969 242 50 28 chr10 19693839 19693990 -120622775 + L1MC/D LINE L1 4452 4598 -1828 806 189 0 0 chr10 19693991 19694144 -120622621 - MER46A DNA MER2_type -58 178 26 2032 208 10 27 chr10 19694152 19694746 -120622019 + L1MC/D LINE L1 5058 5638 -942 1217 176 30 21 chr10 19694746 19694979 -120621786 + MER46A DNA MER2_type 2 236 0 2032 208 10 27 chr10 19694979 19695176 -120621589 + L1MC/D LINE L1 5638 5837 -743 6665 225 75 23 chr10 19695855 19697829 -120618936 + L1MCa LINE L1 58 2331 -4095 5215 40 0 2 chr10 19697829 19698425 -120618340 + L1PA4 LINE L1 5561 6155 0 6665 225 75 23 chr10 19698425 19698979 -120617786 + L1MCa LINE L1 2331 2854 -3572 5643 274 28 38 chr10 19698988 19702336 -120614429 + L1P4 LINE L1 7 3881 -3703 2831 186 6 0 chr10 19702337 19702990 -120613775 + L1P4 LINE L1 6237 6894 -709 244 220 9 28 chr10 19703676 19703785 -120612980 + (CATA)n Simple_repeat Simple_repeat 4 110 0 276 203 108 14 chr10 19705635 19705709 -120611056 - L2 LINE L2 -3 3310 3230 288 299 19 65 chr10 19706621 19706728 -120610037 - MIR3 SINE MIR -3 205 104 1257 206 29 0 chr10 19708361 19708633 -120608132 + L1M3 LINE L1 3964 4243 -1903 1153 163 0 15 chr10 19708763 19708966 -120607799 + L1M3 LINE L1 5603 5802 -381 937 192 91 83 chr10 19708966 19709053 -120607712 - L1M4 LINE L1 -777 5369 5284 2186 116 0 0 chr10 19709053 19709354 -120607411 - AluSc SINE Alu -8 301 1 937 192 91 83 chr10 19709354 19709750 -120607015 - L1M4 LINE L1 -862 5284 4752 405 0 0 0 chr10 19709813 19709858 -120606907 + (TG)n Simple_repeat Simple_repeat 1 45 0 1940 115 7 28 chr10 19709858 19710145 -120606620 - AluSx SINE Alu -31 281 1 220 315 195 0 chr10 19710723 19710872 -120605893 + L3b LINE CR1 1147 1324 -259 225 351 129 12 chr10 19711040 19711211 -120605554 - MIR SINE MIR -6 256 66 270 138 0 0 chr10 19711620 19711678 -120605087 + (CCCCCA)n Simple_repeat Simple_repeat 2 59 0 2221 92 0 13 chr10 19712142 19712445 -120604320 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 19712820 19713125 -120603640 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 19713219 19713517 -120603248 + AluSx SINE Alu 1 298 -14 302 325 167 0 chr10 19713785 19713905 -120602860 - L2 LINE L2 0 3272 3133 311 191 43 9 chr10 19714286 19714401 -120602364 + (TA)n Simple_repeat Simple_repeat 2 120 0 191 220 202 55 chr10 19715411 19715520 -120601245 - MIR3 SINE MIR -54 154 30 279 275 11 0 chr10 19716893 19716984 -120599781 + CT-rich Low_complexity Low_complexity 1 92 0 250 137 36 43 chr10 19716984 19717123 -120599642 - HERV17 LTR ERV1 -7764 862 725 244 205 205 57 chr10 19717630 19717752 -120599013 - MIR SINE MIR -53 209 70 197 0 0 67 chr10 19718192 19718222 -120598543 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 211 267 218 20 chr10 19718233 19718334 -120598431 + MIR SINE MIR 70 190 -72 184 298 89 57 chr10 19718711 19718835 -120597930 + L2 LINE L2 1290 1417 -1897 180 185 108 77 chr10 19719196 19719261 -120597504 - MIR3 SINE MIR -50 158 92 243 0 0 0 chr10 19719307 19719334 -120597431 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 1913 114 11 4 chr10 19719334 19719614 -120597151 - AluSx SINE Alu -30 282 1 492 301 193 1 chr10 19719810 19720126 -120596639 + L2 LINE L2 2665 3042 -271 1345 146 0 23 chr10 19720502 19720722 -120596043 + AluJo SINE Alu 85 299 -13 25 31 0 0 chr10 19720724 19720756 -120596009 + AT_rich Low_complexity Low_complexity 1 32 0 299 219 62 0 chr10 19722355 19722419 -120594346 + L2 LINE L2 3205 3272 0 3559 63 13 0 chr10 19722422 19722882 -120593883 - L1PA4 LINE L1 -436 5719 5254 3703 54 0 0 chr10 19722892 19723321 -120593444 + L1PA4 LINE L1 5716 6144 -11 225 196 0 0 chr10 19724050 19724106 -120592659 + (TA)n Simple_repeat Simple_repeat 2 57 0 2800 87 19 5 chr10 19724316 19724684 -120592081 - THE1C LTR MaLR -2 373 1 964 114 34 13 chr10 19724969 19725118 -120591647 + MLT1A1 LTR MaLR 1 152 -213 1941 131 10 20 chr10 19725223 19725521 -120591244 - AluJb SINE Alu -15 297 3 3639 156 23 26 chr10 19726879 19727256 -120589509 - LTR36 LTR ERV1 -2 609 233 2331 94 7 0 chr10 19727256 19727563 -120589202 - AluSx SINE Alu -3 309 1 3639 156 23 26 chr10 19727563 19727796 -120588969 - LTR36 LTR ERV1 -378 233 1 293 293 143 15 chr10 19728734 19728867 -120587898 + MIR SINE MIR 34 183 -79 286 216 0 0 chr10 19729493 19729544 -120587221 + MIR SINE MIR 79 129 -79 1689 181 0 30 chr10 19729931 19730235 -120586530 + AluJb SINE Alu 5 299 -13 255 291 77 56 chr10 19731001 19731197 -120585568 - MIR SINE MIR -43 219 20 2154 105 20 3 chr10 19731421 19731725 -120585040 - AluY SINE Alu -2 309 1 1828 234 26 86 chr10 19732544 19732671 -120584094 - LTR9 LTR ERV1 0 612 479 2210 103 6 10 chr10 19732671 19732982 -120583783 + AluSx SINE Alu 1 310 -2 1828 234 26 86 chr10 19732982 19733505 -120583260 - LTR9 LTR ERV1 -133 479 1 441 207 43 9 chr10 19733577 19733693 -120583072 - LTR37A LTR ERV1 -18 408 289 604 216 151 8 chr10 19733698 19733957 -120582808 - LTR37A LTR ERV1 -53 373 78 2156 92 0 3 chr10 19733961 19734243 -120582522 + AluY SINE Alu 1 281 -30 195 42 0 0 chr10 19734253 19734277 -120582488 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 324 262 91 77 chr10 19734933 19735227 -120581538 + L1M2 LINE L1 630 994 -5855 205 298 0 0 chr10 19736508 19736565 -120580200 + (TA)n Simple_repeat Simple_repeat 1 57 0 184 302 0 0 chr10 19737354 19737397 -120579368 - L2 LINE L2 -83 3230 3188 2133 111 0 7 chr10 19738628 19738955 -120577810 - AluSx SINE Alu 0 325 1 1639 185 13 4 chr10 19739131 19739459 -120577306 + MER33 DNA MER1_type 1 323 -1 2087 137 0 13 chr10 19740882 19741052 -120575713 - AluSx SINE Alu -9 303 137 2092 117 0 26 chr10 19741052 19741361 -120575404 - AluSx SINE Alu -11 301 1 2087 137 0 13 chr10 19741361 19741497 -120575268 - AluSx SINE Alu -175 137 1 725 248 56 85 chr10 19742900 19743219 -120573546 + MLT1J1 LTR MaLR 12 321 -125 363 236 56 49 chr10 19744626 19744770 -120571995 - L2 LINE L2 0 3313 3169 561 68 0 0 chr10 19745068 19745142 -120571623 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 5475 126 6 0 chr10 19745676 19746499 -120570266 - L1PB1 LINE L1 -1 6150 5323 1071 69 0 8 chr10 19746809 19746940 -120569825 + AluSg SINE Alu 5 134 -176 2275 102 0 7 chr10 19746940 19747243 -120569522 + AluSq SINE Alu 1 301 -12 2051 110 0 0 chr10 19747476 19747757 -120569008 + AluSx SINE Alu 1 281 -31 765 44 0 0 chr10 19747667 19747759 -120569006 + AluSg/x SINE Alu 190 308 0 195 0 0 37 chr10 19747759 19747786 -120568979 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1845 162 7 39 chr10 19749561 19749870 -120566895 + AluJo SINE Alu 1 299 -13 22 35 0 0 chr10 19750020 19750049 -120566716 + AT_rich Low_complexity Low_complexity 1 29 0 415 285 38 44 chr10 19750688 19750846 -120565919 - MIR SINE MIR -18 244 88 2309 102 3 0 chr10 19751230 19751533 -120565232 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr10 19751705 19751729 -120565036 + (T)n Simple_repeat Simple_repeat 1 24 0 2115 120 0 0 chr10 19754406 19754728 -120562037 - AluSx SINE Alu 0 323 2 1027 201 135 66 chr10 19755178 19755305 -120561460 + MLT1B LTR MaLR 1 118 -272 2282 119 0 0 chr10 19755305 19755615 -120561150 - AluSx SINE Alu -2 310 1 1027 201 135 66 chr10 19755615 19755850 -120560915 + MLT1B LTR MaLR 118 388 -2 1904 251 46 42 chr10 19755897 19756654 -120560111 - L1ME3A LINE L1 -7 6163 5404 294 73 0 0 chr10 19756698 19756739 -120560026 + (GA)n Simple_repeat Simple_repeat 2 42 0 208 132 0 38 chr10 19756745 19756798 -120559967 + (TA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 19756883 19756908 -120559857 + AT_rich Low_complexity Low_complexity 1 25 0 2060 87 0 99 chr10 19757594 19757926 -120558839 + AluSp SINE Alu 1 299 -14 663 298 101 0 chr10 19758105 19758333 -120558432 + MIR SINE MIR 12 262 0 435 290 51 7 chr10 19758442 19758580 -120558185 - MIR SINE MIR -116 146 3 218 316 0 0 chr10 19759857 19759914 -120556851 + CT-rich Low_complexity Low_complexity 2 58 0 1711 137 0 29 chr10 19762531 19762808 -120553957 + AluSx SINE Alu 43 311 -1 326 284 119 8 chr10 19764016 19764150 -120552615 - MIR SINE MIR -24 238 90 204 40 0 0 chr10 19766311 19766336 -120550429 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 218 305 40 62 chr10 19766491 19766668 -120550097 - L2 LINE L2 -180 3092 2920 1088 177 6 0 chr10 19766830 19767011 -120549754 - AluSg/x SINE Alu -42 270 89 1675 131 123 0 chr10 19767653 19767913 -120548852 - AluSx SINE Alu -20 292 1 1535 68 0 5 chr10 19768089 19768295 -120548470 + L1PA4 LINE L1 5951 6155 0 1792 179 8 17 chr10 19768503 19768860 -120547905 + L1PA16 LINE L1 5813 6166 0 306 306 83 0 chr10 19768972 19769093 -120547672 + MIR SINE MIR 24 154 -108 872 145 101 0 chr10 19769527 19769665 -120547100 + FRAM SINE Alu 1 152 -24 264 30 0 0 chr10 19769885 19769918 -120546847 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 18 0 55 chr10 19770554 19770609 -120546156 + AT_rich Low_complexity Low_complexity 1 52 0 655 282 241 10 chr10 19771191 19771606 -120545159 - MLT1K LTR MaLR -3 585 75 2122 125 20 0 chr10 19772262 19772565 -120544200 - AluSq SINE Alu -4 309 1 2140 119 0 20 chr10 19773457 19773759 -120543006 - AluSx SINE Alu -16 296 1 962 188 86 139 chr10 19775037 19775199 -120541566 - MER4C LTR ERV1 -1 464 295 1243 151 192 41 chr10 19775199 19775470 -120541295 + AluJb SINE Alu 1 312 0 962 188 86 139 chr10 19775470 19775797 -120540968 - MER4C LTR ERV1 -170 295 1 23 0 0 0 chr10 19776392 19776415 -120540350 + AT_rich Low_complexity Low_complexity 1 23 0 402 237 104 22 chr10 19778382 19778517 -120538248 + MIR SINE MIR 104 249 -13 2167 113 0 3 chr10 19778546 19778870 -120537895 + AluSg SINE Alu 1 310 0 1631 190 0 24 chr10 19779424 19779783 -120536982 - AluJo SINE Alu 0 352 1 694 230 26 7 chr10 19780043 19780195 -120536570 + FRAM SINE Alu 1 155 -11 470 218 41 113 chr10 19780306 19780401 -120536364 - L1ME4a LINE L1 -3 6118 6018 2186 109 3 3 chr10 19780401 19780703 -120536062 + AluSx SINE Alu 1 302 -10 470 218 41 113 chr10 19780703 19780873 -120535892 - L1ME4a LINE L1 -103 6018 5872 380 324 105 5 chr10 19780890 19781109 -120535656 + MIR SINE MIR 9 249 -13 21 36 0 0 chr10 19781188 19781216 -120535549 + AT_rich Low_complexity Low_complexity 1 28 0 2523 99 31 6 chr10 19781256 19781611 -120535154 - THE1B LTR MaLR 0 364 1 593 289 21 5 chr10 19781740 19781927 -120534838 + MIR SINE MIR 58 247 -15 1617 191 13 43 chr10 19782211 19782517 -120534248 - L1MC3 LINE L1 -13 7772 7458 791 143 0 71 chr10 19782517 19782551 -120534214 - L1PA11 LINE L1 0 6174 6139 237 108 0 0 chr10 19782551 19782588 -120534177 + (CAATT)n Simple_repeat Simple_repeat 4 40 0 791 143 0 71 chr10 19782588 19782721 -120534044 - L1PA11 LINE L1 -35 6139 6019 1674 158 8 8 chr10 19782721 19782987 -120533778 - AluJb SINE Alu -40 272 7 1617 191 13 43 chr10 19782987 19783071 -120533694 - L1MC3 LINE L1 -325 7460 7393 271 122 0 0 chr10 19783078 19783127 -120533638 - L1MB7 LINE L1 -19 6165 6117 672 289 141 0 chr10 19783613 19783883 -120532882 - L2 LINE L2 0 3313 3006 2900 101 7 30 chr10 19783952 19783991 -120532774 - MSTA LTR MaLR -2 426 388 2342 102 3 0 chr10 19783991 19784296 -120532469 + AluSp SINE Alu 1 306 -7 2900 101 7 30 chr10 19784296 19784692 -120532073 - MSTA LTR MaLR -40 388 1 307 313 37 107 chr10 19784717 19784989 -120531776 - L2 LINE L2 -6 3266 3014 21 36 0 0 chr10 19785956 19785984 -120530781 + AT_rich Low_complexity Low_complexity 1 28 0 516 189 0 0 chr10 19786043 19786186 -120530579 + CT-rich Low_complexity Low_complexity 1 143 0 1541 154 44 22 chr10 19786186 19786458 -120530307 - AluJo SINE Alu -34 278 1 313 247 0 14 chr10 19786479 19786552 -120530213 - L1ME4a LINE L1 -3 6118 6047 989 150 0 35 chr10 19786826 19786999 -120529766 - AluJo SINE Alu -25 287 121 482 306 150 9 chr10 19787419 19787765 -120529000 - L1ME4a LINE L1 -308 5813 5419 471 323 71 24 chr10 19788679 19789017 -120527748 - L2 LINE L2 -463 2851 2498 353 304 58 58 chr10 19789022 19789229 -120527536 - MIR SINE MIR -48 214 8 3446 124 4 0 chr10 19789302 19789835 -120526930 - L1PB1 LINE L1 -4 6147 5613 189 0 0 0 chr10 19790122 19790143 -120526622 + (TTCA)n Simple_repeat Simple_repeat 4 24 0 858 179 0 24 chr10 19790190 19790358 -120526407 - FRAM SINE Alu -5 171 8 3047 193 14 49 chr10 19790361 19790902 -120525863 - L1MB5 LINE L1 -37 6137 5626 1215 66 16 11 chr10 19790902 19791084 -120525681 - L1MA4 LINE L1 -11 6289 6107 3047 193 14 49 chr10 19791084 19791259 -120525506 - L1MB5 LINE L1 -548 5626 5446 616 302 44 44 chr10 19791617 19791932 -120524833 - L2 LINE L2 0 3313 2999 654 200 106 64 chr10 19793876 19794111 -120522654 - MIR SINE MIR -17 245 1 1839 127 3 77 chr10 19794147 19794470 -120522295 - AluJb SINE Alu -13 299 1 355 145 0 26 chr10 19794819 19794895 -120521870 + (TCTCC)n Simple_repeat Simple_repeat 2 75 0 317 313 27 9 chr10 19795000 19795112 -120521653 + L2 LINE L2 3159 3272 0 450 244 43 13 chr10 19795186 19795366 -120521399 - MLT1L LTR MaLR 0 615 397 283 279 38 0 chr10 19795448 19795527 -120521238 - MLT1L LTR MaLR -346 269 188 35 24 0 0 chr10 19795738 19795780 -120520985 + AT_rich Low_complexity Low_complexity 1 42 0 247 203 39 55 chr10 19795802 19795984 -120520781 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 294 222 60 18 chr10 19795895 19796062 -120520703 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 57 0 0 chr10 19796108 19796143 -120520622 + AT_rich Low_complexity Low_complexity 1 35 0 1146 294 109 29 chr10 19797040 19797794 -120518971 - L2 LINE L2 -13 3300 2484 390 21 0 0 chr10 19797794 19797841 -120518924 + (TG)n Simple_repeat Simple_repeat 2 48 0 1146 294 109 29 chr10 19797841 19797874 -120518891 - L2 LINE L2 -829 2484 2455 53 17 0 0 chr10 19798334 19798394 -120518371 + AT_rich Low_complexity Low_complexity 1 60 0 187 298 18 0 chr10 19798996 19799053 -120517712 - L2 LINE L2 -1 3271 3214 2141 122 0 0 chr10 19799128 19799415 -120517350 - AluSx SINE Alu -13 299 13 1395 177 25 11 chr10 19799431 19799708 -120517057 - L1MA5A LINE L1 -2 6295 6015 243 301 62 0 chr10 19800385 19800498 -120516267 + MIR SINE MIR 126 245 -17 204 256 51 51 chr10 19802414 19802492 -120514273 + MIR SINE MIR 35 112 -150 352 272 24 104 chr10 19802539 19802664 -120514101 + L2 LINE L2 3199 3313 0 638 284 120 9 chr10 19803029 19803254 -120513511 + MIR SINE MIR 13 262 0 2115 130 0 16 chr10 19803838 19804145 -120512620 - AluSx SINE Alu -10 302 1 1389 111 94 148 chr10 19804727 19804859 -120511906 + MER44D DNA MER2_type 1 139 -2352 2070 126 0 0 chr10 19804859 19805145 -120511620 - AluSx SINE Alu -10 302 17 1389 111 94 148 chr10 19805145 19805363 -120511402 + MER44D DNA MER2_type 139 602 -7 264 151 75 0 chr10 19805651 19805704 -120511061 + L1MA8 LINE L1 6232 6288 -3 815 158 0 0 chr10 19806037 19806157 -120510608 + FLAM_C SINE Alu 1 120 -23 1835 137 3 7 chr10 19806203 19806487 -120510278 + AluJo SINE Alu 23 305 -7 486 270 38 27 chr10 19808353 19808538 -120508227 + MIR SINE MIR 3 189 -73 552 358 29 8 chr10 19808707 19808953 -120507812 + MIR SINE MIR 12 262 0 217 242 0 45 chr10 19809011 19809077 -120507688 + GA-rich Low_complexity Low_complexity 5 67 0 21 0 0 0 chr10 19809423 19809444 -120507321 + AT_rich Low_complexity Low_complexity 1 21 0 409 304 45 56 chr10 19809523 19809809 -120506956 - L1ME3A LINE L1 -241 5929 5647 359 294 56 13 chr10 19809989 19810168 -120506597 - L1ME3A LINE L1 -479 5642 5458 344 283 86 0 chr10 19810198 19810396 -120506369 - L1ME3A LINE L1 -814 5332 5118 196 271 43 14 chr10 19811112 19811182 -120505583 + MIR3 SINE MIR 96 167 -41 2316 112 0 3 chr10 19812197 19812509 -120504256 + AluSx SINE Alu 1 311 -1 2033 138 0 3 chr10 19813867 19814156 -120502609 + AluSq SINE Alu 1 288 -25 185 286 186 0 chr10 19814882 19814952 -120501813 - L2 LINE L2 0 3272 3190 969 257 100 55 chr10 19814983 19815055 -120501710 - L2 LINE L2 -90 3223 3156 2146 136 0 0 chr10 19815055 19815364 -120501401 + AluSx SINE Alu 1 309 -3 969 257 100 55 chr10 19815364 19815692 -120501073 - L2 LINE L2 -157 3156 2805 193 328 15 15 chr10 19816269 19816336 -120500429 - MIR3 SINE MIR -31 177 111 1817 139 55 0 chr10 19816453 19816727 -120500038 + AluY SINE Alu 1 289 -22 1950 165 0 3 chr10 19816735 19817032 -120499733 + AluJb SINE Alu 1 296 -16 1907 139 14 3 chr10 19817625 19817919 -120498846 - AluSx SINE Alu -15 297 1 23 0 0 0 chr10 19817948 19817971 -120498794 + AT_rich Low_complexity Low_complexity 1 23 0 229 65 0 0 chr10 19817971 19818017 -120498748 - LTR66 LTR ERVL -171 439 394 252 213 0 0 chr10 19818017 19818078 -120498687 + L1MC4 LINE L1 6636 6696 -1346 522 0 0 0 chr10 19818079 19818137 -120498628 + (GA)n Simple_repeat Simple_repeat 2 59 0 824 139 49 0 chr10 19818249 19818371 -120498394 - AluSq/x SINE Alu -184 129 2 2248 154 0 23 chr10 19818401 19818745 -120498020 + MER1B DNA MER1_type 1 336 -1 1911 152 7 10 chr10 19819208 19819510 -120497255 + AluSx SINE Alu 3 303 -9 1280 237 78 72 chr10 19819728 19820203 -120496562 + L1MC5 LINE L1 7101 7583 -378 366 23 0 0 chr10 19820203 19820246 -120496519 + (CA)n Simple_repeat Simple_repeat 2 44 0 1280 237 78 72 chr10 19820246 19820441 -120496324 + L1MC5 LINE L1 7583 7775 -186 2177 124 0 0 chr10 19820468 19820766 -120495999 + AluSx SINE Alu 1 298 -14 240 207 207 50 chr10 19823181 19823302 -120493463 - MIR SINE MIR -82 180 41 404 167 22 0 chr10 19823352 19823442 -120493323 + CT-rich Low_complexity Low_complexity 1 92 0 1688 199 7 0 chr10 19823442 19823748 -120493017 - AluJb SINE Alu -4 308 1 1971 159 0 0 chr10 19823824 19824133 -120492632 - AluJb SINE Alu -1 311 3 201 207 17 52 chr10 19824325 19824383 -120492382 - MIR SINE MIR -112 96 41 1426 218 93 34 chr10 19825309 19825726 -120491039 - LTR47B LTR ERVL 0 443 2 180 143 0 0 chr10 19825936 19825949 -120490816 + (A)n Simple_repeat Simple_repeat 1 13 -22 2174 108 0 31 chr10 19825949 19826272 -120490493 + AluSq SINE Alu 1 313 0 180 143 0 0 chr10 19826272 19826293 -120490472 + (A)n Simple_repeat Simple_repeat 12 35 0 247 271 29 0 chr10 19826373 19826443 -120490322 + MIR SINE MIR 31 102 -160 2166 117 3 10 chr10 19826561 19826860 -120489905 - AluSq SINE Alu -16 297 1 2341 93 0 7 chr10 19828990 19829291 -120487474 - AluSx SINE Alu -8 304 6 415 243 0 107 chr10 19830039 19830208 -120486557 - MIR SINE MIR -52 210 60 1698 162 21 10 chr10 19830623 19830913 -120485852 + AluJb SINE Alu 1 293 -19 193 277 108 12 chr10 19831363 19831446 -120485319 + MIR SINE MIR 32 122 -86 188 333 48 48 chr10 19831534 19831639 -120485126 - L2 LINE L2 -10 3303 3199 2950 174 55 5 chr10 19832098 19832678 -120484087 + L1MB3 LINE L1 5532 6140 -43 2684 34 0 0 chr10 19832679 19832977 -120483788 + AluY SINE Alu 1 298 -13 1795 165 0 17 chr10 19832988 19833279 -120483486 + AluJo SINE Alu 1 286 -26 2245 128 141 11 chr10 19833607 19833983 -120482782 + MSTA LTR MaLR 2 426 -2 1917 245 17 21 chr10 19834996 19835465 -120481300 + MLT1C LTR MaLR 1 467 0 250 333 117 17 chr10 19836616 19836736 -120480029 + MIR3 SINE MIR 43 174 -34 3134 94 48 64 chr10 19836982 19837480 -120479285 - L1PB4 LINE L1 0 6156 5667 491 320 80 40 chr10 19838338 19838738 -120478027 + L2 LINE L2 2285 2700 -614 1409 138 111 16 chr10 19838825 19839114 -120477651 + MER4A LTR ERV1 264 638 -26 1553 77 5 0 chr10 19839217 19839411 -120477354 + L1PA7 LINE L1 5957 6151 -3 30 27 0 0 chr10 19839543 19839580 -120477185 + AT_rich Low_complexity Low_complexity 1 37 0 342 206 0 0 chr10 19839884 19839957 -120476808 + (TATG)n Simple_repeat Simple_repeat 3 75 0 23 33 0 0 chr10 19840020 19840050 -120476715 + AT_rich Low_complexity Low_complexity 1 30 0 2386 54 6 78 chr10 19840520 19840851 -120475914 + AluY SINE Alu 1 307 -4 2183 153 36 61 chr10 19841290 19841733 -120475032 + MSTB1 LTR MaLR 1 432 0 2786 191 12 18 chr10 19842528 19843032 -120473733 + MLT1D LTR MaLR 5 505 0 1575 186 0 39 chr10 19843137 19843448 -120473317 - AluJo SINE Alu -13 299 1 407 296 177 10 chr10 19843932 19844135 -120472630 + MIR SINE MIR 16 252 -10 22 0 0 0 chr10 19844142 19844164 -120472601 + AT_rich Low_complexity Low_complexity 1 22 0 1817 210 37 68 chr10 19844261 19844394 -120472371 + LTR55 LTR ERV 1 136 -412 1740 171 0 19 chr10 19844394 19844583 -120472182 - AluJo SINE Alu -8 304 122 194 0 39 0 chr10 19844583 19844609 -120472156 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1740 171 0 19 chr10 19844609 19844729 -120472036 - AluJo SINE Alu -190 122 1 1817 210 37 68 chr10 19844729 19845157 -120471608 + LTR55 LTR ERV 136 545 -3 614 200 70 1 chr10 19845432 19845572 -120471193 - MLT1A1 LTR MaLR 0 374 231 1111 153 99 10 chr10 19845729 19845931 -120470834 - MLT1A1 LTR MaLR -145 220 1 2462 303 195 26 chr10 19846545 19848316 -120468449 + L2 LINE L2 965 3046 -267 366 255 37 93 chr10 19848998 19849061 -120467704 + MIR SINE MIR 48 113 -149 2226 115 0 10 chr10 19849061 19849365 -120467400 - AluSx SINE Alu -11 301 1 366 255 37 93 chr10 19849365 19849401 -120467364 + MIR SINE MIR 113 149 -113 2096 149 131 11 chr10 19849401 19849783 -120466982 - MSTA LTR MaLR 0 428 1 366 255 37 93 chr10 19849783 19849843 -120466922 + MIR SINE MIR 149 199 -63 539 283 147 20 chr10 19850813 19851011 -120465754 + MIR SINE MIR 13 235 -27 419 297 173 40 chr10 19852763 19853452 -120463313 + L2 LINE L2 2535 3313 0 1769 161 0 17 chr10 19854475 19854797 -120461968 + AluJb SINE Alu 1 317 0 403 277 107 20 chr10 19854836 19855187 -120461578 - MLT1J LTR MaLR -63 448 6 285 237 0 17 chr10 19855192 19855251 -120461514 - L2 LINE L2 -31 3241 3184 448 357 77 21 chr10 19855370 19855572 -120461193 + L2 LINE L2 2925 3153 -119 2174 115 0 0 chr10 19855572 19855860 -120460905 - AluSx SINE Alu -24 288 1 448 357 77 21 chr10 19855860 19855982 -120460783 + L2 LINE L2 3153 3267 -5 2014 106 11 3 chr10 19856262 19856579 -120460186 + AluSq SINE Alu 1 319 0 1550 185 0 46 chr10 19857099 19857238 -120459527 + AluJo SINE Alu 1 120 -192 1972 127 0 78 chr10 19857238 19857569 -120459196 + AluSx SINE Alu 1 305 -7 1550 185 0 46 chr10 19857569 19857731 -120459034 + AluJo SINE Alu 120 288 -24 24 32 0 0 chr10 19860466 19860497 -120456268 + AT_rich Low_complexity Low_complexity 1 31 0 1457 76 0 0 chr10 19861995 19862180 -120454585 - L1MA2 LINE L1 0 6304 6120 2664 252 51 47 chr10 19862180 19862962 -120453803 - L1ME3A LINE L1 -14 6156 5368 1865 120 74 11 chr10 19862962 19863246 -120453519 - AluSg SINE Alu -8 302 1 2664 252 51 47 chr10 19863246 19863321 -120453444 - L1ME3A LINE L1 -802 5368 5295 457 329 46 20 chr10 19863391 19863644 -120453121 + MIR SINE MIR 3 261 -1 316 371 35 0 chr10 19864030 19864146 -120452619 - MIR SINE MIR -62 146 27 21 0 0 0 chr10 19864199 19864220 -120452545 + AT_rich Low_complexity Low_complexity 1 21 0 2064 116 3 3 chr10 19864422 19864716 -120452049 + AluSx SINE Alu 1 294 -18 323 192 14 0 chr10 19864784 19864857 -120451908 + (TATG)n Simple_repeat Simple_repeat 2 75 0 21 0 0 0 chr10 19865010 19865031 -120451734 + AT_rich Low_complexity Low_complexity 1 21 0 2294 121 0 0 chr10 19865139 19865446 -120451319 + AluSx SINE Alu 1 307 -5 459 245 105 7 chr10 19865715 19865858 -120450907 + MIR SINE MIR 95 251 -11 221 341 63 40 chr10 19866024 19866150 -120450615 - L2 LINE L2 -5 3267 3139 757 303 71 88 chr10 19867406 19867825 -120448940 + L2 LINE L2 2219 2621 -693 2119 176 24 11 chr10 19867825 19868195 -120448570 - THE1C LTR MaLR 0 375 1 757 303 71 88 chr10 19868195 19868525 -120448240 + L2 LINE L2 2621 2955 -359 213 346 0 25 chr10 19868632 19868713 -120448052 + L2 LINE L2 3231 3309 -4 203 88 29 0 chr10 19869822 19869856 -120446909 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2660 116 17 8 chr10 19870320 19870681 -120446084 + THE1B LTR MaLR 1 364 0 359 323 21 53 chr10 19870683 19870872 -120445893 + MER5A DNA MER1_type 7 189 0 252 256 22 44 chr10 19871118 19871176 -120445589 - MLT1K LTR MaLR -486 102 45 233 29 0 29 chr10 19871176 19871211 -120445554 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 252 256 22 44 chr10 19871211 19871242 -120445523 - MLT1K LTR MaLR -543 45 15 1303 50 0 19 chr10 19873283 19873443 -120443322 + L1PA11 LINE L1 6017 6173 -1 21 36 0 0 chr10 19873444 19873472 -120443293 + AT_rich Low_complexity Low_complexity 1 28 0 259 212 0 91 chr10 19874330 19874396 -120442369 + AluJb SINE Alu 1 60 -242 2050 143 3 0 chr10 19874396 19874689 -120442076 - AluSx SINE Alu -18 294 1 1464 141 0 28 chr10 19874691 19874940 -120441825 + AluJb SINE Alu 52 293 -19 328 358 58 8 chr10 19875494 19875614 -120441151 - L2 LINE L2 0 3272 3147 851 151 0 0 chr10 19876007 19876126 -120440639 + FLAM_C SINE Alu 1 119 -24 21 0 0 0 chr10 19876521 19876542 -120440223 + AT_rich Low_complexity Low_complexity 1 21 0 1963 138 3 3 chr10 19876548 19876837 -120439928 + AluJb SINE Alu 5 293 -19 2042 130 3 0 chr10 19877607 19877891 -120438874 + AluSx SINE Alu 1 285 -27 560 248 177 20 chr10 19878056 19878254 -120438511 - MIR SINE MIR -5 257 29 416 322 57 11 chr10 19878285 19878462 -120438303 - MER91A DNA MER1_type -11 185 1 356 336 65 18 chr10 19878695 19878912 -120437853 - MIR SINE MIR -28 234 8 303 298 53 30 chr10 19879130 19879261 -120437504 - L2 LINE L2 -10 3303 3170 231 274 27 27 chr10 19879433 19879506 -120437259 - LTR16C LTR ERVL -14 477 405 1978 120 0 4 chr10 19879538 19879812 -120436953 + AluSx SINE Alu 33 305 -7 295 258 57 69 chr10 19880294 19880453 -120436312 + MIR SINE MIR 98 254 -8 475 141 0 0 chr10 19880552 19880623 -120436142 - THE1B LTR MaLR 0 375 305 7646 50 2 1 chr10 19880624 19881635 -120435130 + L1PA5 LINE L1 5132 6148 -6 27 0 0 0 chr10 19881869 19881896 -120434869 + AT_rich Low_complexity Low_complexity 1 27 0 2131 99 9 37 chr10 19881896 19882220 -120434545 - THE1B LTR MaLR -49 315 1 834 231 102 106 chr10 19883004 19883494 -120433271 + MLT1G1 LTR MaLR 108 595 0 745 249 95 4 chr10 19883706 19883947 -120432818 - Charlie4a DNA MER1_type -32 476 214 2549 58 0 6 chr10 19884045 19884357 -120432408 + AluY SINE Alu 2 311 0 836 225 48 5 chr10 19884523 19884732 -120432033 - Charlie4a DNA MER1_type -275 233 16 2107 134 0 0 chr10 19884856 19885148 -120431617 + AluSx SINE Alu 1 292 -20 1927 177 44 61 chr10 19885273 19885378 -120431387 - MLT1C LTR MaLR 0 467 362 2038 155 3 0 chr10 19885378 19885682 -120431083 + AluJo SINE Alu 1 305 -7 1927 177 44 61 chr10 19885682 19886051 -120430714 - MLT1C LTR MaLR -105 362 1 261 0 0 0 chr10 19886486 19886515 -120430250 + (CA)n Simple_repeat Simple_repeat 2 30 0 2074 149 0 0 chr10 19886573 19886881 -120429884 + AluSx SINE Alu 2 309 -3 2501 81 0 0 chr10 19887094 19887403 -120429362 - AluY SINE Alu -2 309 1 360 64 0 0 chr10 19887901 19887948 -120428817 + (T)n Simple_repeat Simple_repeat 1 47 0 1401 107 5 0 chr10 19887949 19888136 -120428629 - AluSx SINE Alu -124 188 1 2278 102 0 0 chr10 19890185 19890479 -120426286 + AluSg SINE Alu 1 294 -16 857 288 145 8 chr10 19892198 19892590 -120424175 - L2 LINE L2 -3 3310 2865 234 0 0 0 chr10 19893808 19893834 -120422931 + (T)n Simple_repeat Simple_repeat 1 26 0 453 290 130 10 chr10 19894628 19894835 -120421930 + MIR SINE MIR 1 232 -30 1732 156 3 45 chr10 19895072 19895380 -120421385 + AluJo SINE Alu 1 295 -17 2170 115 3 3 chr10 19895896 19896192 -120420573 + AluSq SINE Alu 1 296 -17 867 148 12 31 chr10 19896728 19896946 -120419819 + L1PA4 LINE L1 5997 6211 0 1018 165 0 0 chr10 19897329 19897487 -120419278 + AluJb SINE Alu 91 248 -64 3367 104 10 16 chr10 19897856 19898344 -120418421 + L1PB1 LINE L1 5666 6150 -1 1606 176 6 40 chr10 19898703 19899026 -120417739 + AluJo SINE Alu 1 312 0 1755 197 0 0 chr10 19899428 19899738 -120417027 - AluJo SINE Alu -2 310 1 369 302 60 20 chr10 19901119 19901268 -120415497 - Charlie8 DNA MER1_type -2260 157 3 884 122 0 0 chr10 19901341 19901464 -120415301 + FRAM SINE Alu 38 160 -16 184 301 56 28 chr10 19901583 19901726 -120415039 - L2 LINE L2 -1392 1922 1776 1979 141 3 0 chr10 19902665 19902955 -120413810 + AluSg SINE Alu 1 291 -19 351 206 206 53 chr10 19902970 19903140 -120413625 + L2 LINE L2 3117 3312 -1 2117 133 0 3 chr10 19903471 19903779 -120412986 - AluSx SINE Alu -1 311 5 945 167 10 16 chr10 19903810 19904002 -120412763 - L1PA15 LINE L1 -22 6143 5953 2261 89 7 3 chr10 19904942 19905246 -120411519 - AluSg SINE Alu -5 305 1 1500 393 3 0 chr10 19905813 19906121 -120410644 + AluSp SINE Alu 1 309 -4 1493 124 0 14 chr10 19906156 19906373 -120410392 - AluSx SINE Alu -96 216 3 238 234 74 84 chr10 19906454 19906753 -120410012 - HAL1 LINE L1 -1401 1106 811 2304 159 26 7 chr10 19906883 19907299 -120409466 - Tigger2a DNA MER2_type -8 426 3 23 0 0 0 chr10 19907844 19907867 -120408898 + AT_rich Low_complexity Low_complexity 1 23 0 189 352 74 0 chr10 19908471 19908579 -120408186 + MIR SINE MIR 147 262 0 844 219 38 9 chr10 19908756 19908966 -120407799 - MER20 DNA MER1_type 0 219 4 2055 121 0 7 chr10 19910542 19910824 -120405941 + AluSx SINE Alu 1 280 -32 266 0 0 29 chr10 19910825 19910860 -120405905 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1403 181 0 110 chr10 19910866 19911202 -120405563 + AluJo SINE Alu 1 299 -3 1326 197 138 26 chr10 19911215 19911606 -120405159 + MER63B DNA MER1_type 2 436 0 204 250 18 0 chr10 19911614 19911670 -120405095 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 1607 218 6 19 chr10 19911937 19912253 -120404512 - AluJo SINE Alu 0 312 1 225 382 15 7 chr10 19912622 19912724 -120404041 + L2 LINE L2 1865 1970 -1344 2636 152 30 14 chr10 19912724 19913218 -120403547 - L1PA16 LINE L1 -1 6165 5664 225 382 15 7 chr10 19913218 19913251 -120403514 + L2 LINE L2 1970 2001 -1313 371 317 10 0 chr10 19913268 19913372 -120403393 - L2 LINE L2 0 3313 3209 6199 103 19 0 chr10 19913389 19915098 -120401667 + L1PA8 LINE L1 4412 6151 -21 38 0 0 0 chr10 19915098 19915136 -120401629 + AT_rich Low_complexity Low_complexity 1 38 0 578 274 98 8 chr10 19915228 19915483 -120401282 - L2 LINE L2 -225 3088 2811 202 156 44 0 chr10 19915801 19915846 -120400919 + (CTTTG)n Simple_repeat Simple_repeat 2 48 0 748 252 65 4 chr10 19916012 19916258 -120400507 + MIR SINE MIR 2 262 0 1670 104 0 0 chr10 19916930 19917171 -120399594 + L1MA1 LINE L1 6054 6294 -8 1871 157 0 10 chr10 19917362 19917662 -120399103 + AluJo SINE Alu 1 297 -15 25 0 0 0 chr10 19918356 19918381 -120398384 + AT_rich Low_complexity Low_complexity 1 25 0 1960 145 13 0 chr10 19918448 19918751 -120398014 - AluJo SINE Alu -5 307 1 230 327 27 36 chr10 19919780 19919890 -120396875 - L2 LINE L2 -211 3061 2953 1953 144 0 35 chr10 19920062 19920374 -120396391 + AluSx SINE Alu 1 301 -11 308 233 70 0 chr10 19920375 19920461 -120396304 - MIR SINE MIR -25 237 146 475 254 16 0 chr10 19920480 19920606 -120396159 + MER45A DNA AcHobo 46 173 -5 1776 167 0 20 chr10 19920685 19920985 -120395780 - AluJo SINE Alu -16 296 3 638 131 42 24 chr10 19920996 19921164 -120395601 + CT-rich Low_complexity Low_complexity 4 174 0 204 195 61 24 chr10 19921179 19921261 -120395504 + CT-rich Low_complexity Low_complexity 4 88 0 1484 182 38 4 chr10 19921263 19921527 -120395238 - AluJb SINE Alu -39 273 1 1981 136 0 7 chr10 19922229 19922515 -120394250 - AluJb SINE Alu -23 289 6 1986 142 3 16 chr10 19922904 19923220 -120393545 - AluSx SINE Alu 0 312 1 809 229 17 22 chr10 19923708 19923887 -120392878 + MER5B DNA MER1_type 1 178 0 272 200 171 0 chr10 19924431 19924501 -120392264 - Charlie1 DNA MER1_type -2678 83 2 204 40 0 0 chr10 19924988 19925013 -120391752 + (A)n Simple_repeat Simple_repeat 1 25 0 2120 123 0 16 chr10 19925314 19925631 -120391134 - AluSx SINE Alu 0 312 1 1572 199 36 0 chr10 19925859 19926136 -120390629 + AluJo SINE Alu 1 287 -25 2252 99 0 0 chr10 19926165 19926457 -120390308 - AluSg SINE Alu -18 292 1 2257 103 0 0 chr10 19926484 19926774 -120389991 - AluSc SINE Alu -19 290 1 897 200 0 18 chr10 19926798 19926963 -120389802 + FRAM SINE Alu 1 162 -4 215 314 121 32 chr10 19927171 19927295 -120389470 - MIR SINE MIR -58 150 16 593 321 88 25 chr10 19927376 19927983 -120388782 - L2 LINE L2 -257 3015 2264 1083 174 5 18 chr10 19930050 19930268 -120386497 - MER20 DNA MER1_type -4 215 1 207 283 221 0 chr10 19930283 19930396 -120386369 - MIR SINE MIR -6 256 119 1697 122 30 64 chr10 19930787 19931082 -120385683 + AluSx SINE Alu 5 289 -23 420 20 0 0 chr10 19931275 19931324 -120385441 + (CA)n Simple_repeat Simple_repeat 2 50 0 570 220 35 78 chr10 19931585 19931827 -120384938 - LTR37B LTR ERV1 -2 466 236 2100 136 7 3 chr10 19931827 19932128 -120384637 + AluSq SINE Alu 1 302 -11 570 220 35 78 chr10 19932128 19932167 -120384598 - LTR37B LTR ERV1 -232 236 197 365 262 35 48 chr10 19932375 19932520 -120384245 - L1ME4a LINE L1 -16 6105 5963 1484 183 98 7 chr10 19932569 19932890 -120383875 - AluJo SINE Alu 0 347 1 22 0 0 0 chr10 19933027 19933049 -120383716 + AT_rich Low_complexity Low_complexity 1 22 0 320 138 0 15 chr10 19933312 19933377 -120383388 - L1MA9 LINE L1 -34 6278 6215 * 1670 183 42 13 chr10 19933352 19933943 -120382822 + L1M2 LINE L1 4929 5535 -743 325 252 205 16 chr10 19933980 19934107 -120382658 - L1ME4a LINE L1 -287 5883 5733 448 171 18 9 chr10 19934108 19934219 -120382546 + CT-rich Low_complexity Low_complexity 1 112 0 1971 159 10 7 chr10 19934219 19934528 -120382237 - AluJo SINE Alu -2 310 1 281 289 61 18 chr10 19934613 19934727 -120382038 - L1ME4a LINE L1 -516 5654 5536 2064 128 0 0 chr10 19934727 19935017 -120381748 + AluSx SINE Alu 1 290 -22 1304 227 40 12 chr10 19935079 19935400 -120381365 - MER58B DNA MER1_type -10 331 2 238 288 96 44 chr10 19935400 19935650 -120381115 - L1M3 LINE L1 -667 5516 5254 739 163 8 0 chr10 19937832 19937955 -120378810 + FLAM_C SINE Alu 1 124 -19 215 137 0 39 chr10 19938307 19938358 -120378407 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 473 295 42 6 chr10 19938843 19939009 -120377756 + MIR SINE MIR 14 185 -77 2063 109 3 11 chr10 19939857 19940140 -120376625 - AluSx SINE Alu -15 297 17 232 196 0 0 chr10 19940176 19940222 -120376543 + FLAM_C SINE Alu 114 159 0 194 83 56 0 chr10 19940254 19940290 -120376475 + A-rich Low_complexity Low_complexity 2 39 0 319 285 101 76 chr10 19940390 19940758 -120376007 - L1ME4a LINE L1 -180 5941 5565 405 124 155 21 chr10 19940992 19941089 -120375676 + LTR9B LTR ERV1 449 558 -86 2267 91 0 0 chr10 19941626 19941922 -120374843 - AluSg SINE Alu -14 296 1 1929 143 0 0 chr10 19942102 19942381 -120374384 - AluJb SINE Alu -33 279 1 1674 117 38 62 chr10 19942646 19942961 -120373804 - AluSx SINE Alu 0 308 1 216 330 26 0 chr10 19942963 19943062 -120373703 + MIR SINE MIR 52 153 -61 363 213 0 0 chr10 19943916 19943996 -120372769 + (TGGA)n Simple_repeat Simple_repeat 2 81 0 1972 107 40 0 chr10 19943998 19944270 -120372495 - AluSx SINE Alu -27 285 3 1554 188 7 11 chr10 19944306 19944583 -120372182 + AluJo SINE Alu 1 276 -36 1469 179 31 35 chr10 19945013 19945332 -120371433 + L1MB3 LINE L1 5858 6175 -8 21 36 0 0 chr10 19945397 19945425 -120371340 + AT_rich Low_complexity Low_complexity 1 28 0 2353 82 0 3 chr10 19945432 19945723 -120371042 + AluSq SINE Alu 1 290 -23 183 42 0 0 chr10 19945732 19945756 -120371009 + (TAA)n Simple_repeat Simple_repeat 2 25 0 321 291 27 27 chr10 19945756 19945898 -120370867 - MIR SINE MIR -80 182 41 633 133 0 0 chr10 19946291 19946381 -120370384 - FRAM SINE Alu -25 151 62 189 107 0 0 chr10 19946612 19946640 -120370125 + (T)n Simple_repeat Simple_repeat 1 28 0 2262 102 0 0 chr10 19948600 19948893 -120367872 + AluSg SINE Alu 2 294 -16 206 289 0 60 chr10 19949532 19949615 -120367150 + MIR SINE MIR 76 153 -109 1568 125 33 4 chr10 19950349 19950663 -120366102 + Tigger4(Zombi) DNA MER2_type 1 2725 -6 2249 113 0 6 chr10 19951093 19951404 -120365361 - AluSg1 SINE Alu 0 309 1 180 111 0 0 chr10 19951880 19951907 -120364858 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1871 175 10 0 chr10 19952095 19952398 -120364367 - AluJb SINE Alu -6 306 1 2689 26 3 0 chr10 19952407 19952711 -120364054 - AluY SINE Alu -6 305 1 434 226 105 50 chr10 19952746 19952927 -120363838 - MER20B DNA MER1_type -62 721 531 949 238 70 30 chr10 19952998 19953326 -120363439 - MER20B DNA MER1_type -381 402 62 182 347 105 32 chr10 19953406 19953501 -120363264 + L2 LINE L2 3170 3271 -1 1879 152 0 3 chr10 19953573 19953856 -120362909 - AluSx SINE Alu -30 282 1 309 300 0 0 chr10 19953857 19953937 -120362828 - L2 LINE L2 0 3313 3234 324 0 0 0 chr10 19953966 19954002 -120362763 + (TC)n Simple_repeat Simple_repeat 2 37 0 1889 154 0 7 chr10 19954686 19955004 -120361761 - AluSx SINE Alu 0 316 1 1432 95 0 5 chr10 19955033 19955222 -120361543 - L1PA7 LINE L1 0 6154 5967 246 239 70 0 chr10 19955587 19955658 -120361107 - MIR SINE MIR -85 177 102 1772 155 14 17 chr10 19955663 19955954 -120360811 - AluJo SINE Alu -22 290 1 348 287 70 0 chr10 19955968 19956083 -120360682 - MIR SINE MIR -38 224 102 1725 162 7 24 chr10 19956659 19956956 -120359809 + AluJb SINE Alu 20 311 -1 248 207 9 81 chr10 19957289 19957400 -120359365 - AluJb SINE Alu -169 133 31 1694 118 118 11 chr10 19957964 19958244 -120358521 + AluSg SINE Alu 1 310 0 276 305 62 45 chr10 19958962 19959134 -120357631 + MIR SINE MIR 3 174 -82 1884 136 13 27 chr10 19959255 19959556 -120357209 - AluSq SINE Alu -13 300 4 2160 127 3 0 chr10 19959606 19959905 -120356860 - AluSx SINE Alu -12 300 1 361 342 30 40 chr10 19960290 19960489 -120356276 - MIR3 SINE MIR -4 204 8 276 324 140 0 chr10 19960520 19960656 -120356109 + MIR3 SINE MIR 23 177 -31 2565 53 0 0 chr10 19961490 19961789 -120354976 + AluY SINE Alu 2 300 -11 1441 100 220 17 chr10 19961867 19962108 -120354657 + AluSg1 SINE Alu 1 290 -19 21 0 0 0 chr10 19962584 19962605 -120354160 + AT_rich Low_complexity Low_complexity 1 21 0 2208 123 0 0 chr10 19964928 19965228 -120351537 + AluSx SINE Alu 1 300 -12 770 153 178 13 chr10 19965342 19965499 -120351266 + MER3 DNA MER1_type 1 183 -26 315 247 27 0 chr10 19965520 19965593 -120351172 + MER5A DNA MER1_type 11 85 -104 1909 156 0 19 chr10 19965596 19965903 -120350862 - AluSx SINE Alu -11 301 1 268 296 0 0 chr10 19966138 19966226 -120350539 + (TA)n Simple_repeat Simple_repeat 2 89 0 310 241 118 59 chr10 19966231 19966401 -120350364 - L1ME LINE L1 -418 5703 5524 8071 20 0 4 chr10 19966513 19967712 -120349053 - L1PA4 LINE L1 -2 6153 4949 2090 141 3 0 chr10 19967712 19968009 -120348756 - AluSq SINE Alu -14 299 2 8071 20 0 4 chr10 19968009 19968039 -120348726 - L1PA4 LINE L1 -1206 4949 4920 291 288 247 7 chr10 19968051 19968197 -120348568 + MIR SINE MIR 82 262 0 1048 166 0 33 chr10 19968238 19968419 -120348346 - AluJo SINE Alu -137 175 1 200 274 20 0 chr10 19968542 19968593 -120348172 - L2 LINE L2 0 3313 3262 479 335 138 5 chr10 19968705 19968929 -120347836 - MIR SINE MIR -1 261 8 897 142 0 35 chr10 19969749 19969890 -120346875 + AluJo SINE Alu 1 136 -176 214 300 3 35 chr10 19970099 19970184 -120346581 - MIR3 SINE MIR -53 155 92 1287 133 36 0 chr10 19970331 19970527 -120346238 + AluJo SINE Alu 93 295 -17 4630 112 14 26 chr10 19971215 19971773 -120344992 + L1MA2 LINE L1 5561 6109 -195 2726 114 57 71 chr10 19971773 19972266 -120344499 - LTR19A LTR ERV1 0 486 1 4630 112 14 26 chr10 19972266 19972438 -120344327 + L1MA2 LINE L1 6109 6282 -22 1591 219 49 0 chr10 19972682 19973007 -120343758 - MER58B DNA MER1_type 0 341 1 1675 170 31 7 chr10 19973770 19974058 -120342707 + AluJo SINE Alu 1 295 -17 195 271 86 0 chr10 19974205 19974275 -120342490 - L2 LINE L2 -12 3301 3226 1575 142 8 132 chr10 19974445 19974506 -120342259 - L1MB3 LINE L1 -1 6182 6115 2060 132 6 6 chr10 19974506 19974817 -120341948 - AluSx SINE Alu -1 311 1 1575 142 8 132 chr10 19974817 19975009 -120341756 - L1MB3 LINE L1 -68 6115 5989 1794 174 0 4 chr10 19975009 19975290 -120341475 - AluJb SINE Alu -32 280 1 1575 142 8 132 chr10 19975290 19975415 -120341350 - L1MB3 LINE L1 -194 5989 5850 2296 114 0 0 chr10 19975751 19976059 -120340706 - AluSx SINE Alu -4 308 1 405 96 0 0 chr10 19976532 19976584 -120340181 + Alu SINE Alu 2 53 -260 379 191 191 22 chr10 19976598 19976687 -120340078 + L1ME LINE L1 5523 5626 -544 2227 94 3 3 chr10 19976713 19977011 -120339754 + AluSg SINE Alu 1 298 -12 4641 77 7 0 chr10 19977684 19978267 -120338498 - L1PA10 LINE L1 -3 6165 5579 450 277 98 36 chr10 19978548 19978772 -120337993 - L2 LINE L2 -526 2788 2551 463 256 91 35 chr10 19978812 19979011 -120337754 - L2 LINE L2 -29 3284 3075 2213 121 0 0 chr10 19979017 19979307 -120337458 - AluSx SINE Alu -22 290 1 1763 177 3 16 chr10 19979745 19980061 -120336704 + AluJb SINE Alu 1 312 0 466 227 43 64 chr10 19980237 19980300 -120336465 - MER5B DNA MER1_type -2 176 113 2113 111 17 10 chr10 19980300 19980597 -120336168 + AluSx SINE Alu 1 299 -13 466 227 43 64 chr10 19980597 19980674 -120336091 - MER5B DNA MER1_type -65 113 39 1204 95 0 85 chr10 19980775 19980964 -120335801 + AluSp SINE Alu 129 301 -12 627 277 99 52 chr10 19981042 19981616 -120335149 - L1MC4a LINE L1 -1923 5885 5261 2440 62 0 13 chr10 19981702 19982008 -120334757 - AluY SINE Alu -9 302 1 201 292 77 15 chr10 19982097 19982162 -120334603 + L2 LINE L2 3154 3222 -50 186 337 117 18 chr10 19982409 19982572 -120334193 + L2 LINE L2 2880 3058 -214 235 165 94 59 chr10 19982724 19982809 -120333956 - L2 LINE L2 -37 3276 3189 1145 208 0 0 chr10 19983051 19983267 -120333498 - AluJb SINE Alu -4 308 93 831 167 0 0 chr10 19983390 19983516 -120333249 - FLAM_C SINE Alu -17 126 1 1835 152 7 10 chr10 19984602 19984898 -120331867 - AluJo SINE Alu -17 295 1 268 217 101 39 chr10 19985312 19985441 -120331324 - L1M LINE L1 -2406 5402 5266 2188 103 0 3 chr10 19985679 19985971 -120330794 - AluSg SINE Alu -19 291 1 258 314 38 38 chr10 19986319 19986424 -120330341 - MIR SINE MIR -63 145 41 759 280 123 68 chr10 19986914 19987104 -120329661 - L2 LINE L2 0 3313 3135 2100 135 7 3 chr10 19987104 19987408 -120329357 + AluJb SINE Alu 1 305 -7 759 280 123 68 chr10 19987408 19987688 -120329077 - L2 LINE L2 -178 3135 2817 * 1389 261 55 17 chr10 19987668 19988127 -120328638 - L2 LINE L2 -1197 2117 1642 2102 116 39 0 chr10 19988386 19988671 -120328094 + AluSq SINE Alu 1 296 -17 1882 117 7 58 chr10 19989406 19989715 -120327050 - AluSg SINE Alu -17 293 1 369 245 252 7 chr10 19990080 19990227 -120326538 + MIR SINE MIR 80 262 0 206 105 26 0 chr10 19990553 19990591 -120326174 + GA-rich Low_complexity Low_complexity 2 40 0 439 315 113 70 chr10 19990638 19991038 -120325727 + L2 LINE L2 2876 3292 -21 2031 133 0 0 chr10 19991416 19991710 -120325055 - AluSx SINE Alu -12 300 7 2238 95 3 0 chr10 19991947 19992230 -120324535 - AluSx SINE Alu -28 284 1 1597 125 9 0 chr10 19992644 19992868 -120323897 + AluSx SINE Alu 1 226 -86 789 146 0 31 chr10 19992968 19993098 -120323667 - FRAM SINE Alu -21 155 30 797 127 475 12 chr10 19993100 19993359 -120323406 + LTR29 LTR ERV1 46 424 -198 788 181 58 6 chr10 19993353 19993524 -120323241 + LTR49 LTR ERV1 416 595 0 * 2709 143 46 22 chr10 19993783 19993806 -120322959 + MER4C LTR ERV1 1 22 -443 2026 127 10 0 chr10 19993806 19994105 -120322660 + AluSq SINE Alu 1 302 -11 2709 143 46 22 chr10 19994105 19994535 -120322230 + MER4C LTR ERV1 22 465 0 3820 136 20 36 chr10 19994575 19994827 -120321938 + MER41B LTR ERV1 1 255 -380 4358 116 14 31 chr10 19994827 19995004 -120321761 + MER51A LTR ERV1 1 179 -455 1960 152 0 23 chr10 19995004 19995307 -120321458 - AluSx SINE Alu -16 296 1 4358 116 14 31 chr10 19995307 19995774 -120320991 + MER51A LTR ERV1 179 634 0 3820 136 20 36 chr10 19995774 19996166 -120320599 + MER41B LTR ERV1 255 635 0 246 289 13 0 chr10 19996231 19996307 -120320458 + MIR SINE MIR 168 244 -18 2721 244 63 30 chr10 19996518 19997328 -120319437 + MER21B LTR ERV1 12 848 -15 413 147 3 0 chr10 19997620 19997693 -120319072 + MER4C LTR ERV1 389 452 -13 363 324 88 0 chr10 19997994 19998142 -120318623 - MIR3 SINE MIR -19 189 29 201 276 8 118 chr10 19998837 19998964 -120317801 + MER5A DNA MER1_type 77 189 0 241 292 81 76 chr10 19999066 19999251 -120317514 + MER5A DNA MER1_type 1 186 -3 2454 96 0 0 chr10 19999501 19999813 -120316952 + AluSx SINE Alu 1 312 0 183 147 88 0 chr10 20000312 20000346 -120316419 - MIR SINE MIR -101 161 125 2310 98 0 3 chr10 20000713 20001018 -120315747 - AluSq SINE Alu -9 304 1 268 222 65 9 chr10 20001470 20001578 -120315187 + (TATAG)n Simple_repeat Simple_repeat 2 115 0 * 312 136 57 62 chr10 20001559 20001735 -120315030 + (TA)n Simple_repeat Simple_repeat 1 175 0 678 150 0 0 chr10 20001735 20001835 -120314930 - AluS SINE Alu -211 101 2 21 0 0 0 chr10 20001929 20001950 -120314815 + AT_rich Low_complexity Low_complexity 1 21 0 244 250 0 0 chr10 20002355 20002407 -120314358 + MIR3 SINE MIR 103 154 -54 1262 153 59 21 chr10 20003022 20003258 -120313507 - AluJo SINE Alu -11 301 57 26 0 0 0 chr10 20003258 20003284 -120313481 + AT_rich Low_complexity Low_complexity 1 26 0 2068 127 4 0 chr10 20003382 20003692 -120313073 + AluSp SINE Alu 1 282 -31 1715 176 29 10 chr10 20003797 20004103 -120312662 - AluJb SINE Alu 0 312 1 2018 119 7 0 chr10 20005129 20005406 -120311359 - AluSx SINE Alu -33 279 1 1464 155 40 16 chr10 20005786 20006038 -120310727 + AluJo SINE Alu 39 296 -16 2103 132 3 0 chr10 20006299 20006603 -120310162 + AluSx SINE Alu 1 305 -7 258 300 105 32 chr10 20006812 20006934 -120309831 + L2 LINE L2 2149 2261 -1053 2203 128 0 0 chr10 20006934 20007232 -120309533 - AluSx SINE Alu -14 298 1 258 300 105 32 chr10 20007232 20007356 -120309409 + L2 LINE L2 2261 2413 -901 199 255 99 45 chr10 20007561 20007829 -120308936 - L2 LINE L2 -696 2618 2259 994 149 52 17 chr10 20007836 20008010 -120308755 - AluJ SINE Alu 0 312 133 514 309 105 41 chr10 20008137 20008549 -120308216 - L2 LINE L2 -1275 2039 1655 1386 179 12 86 chr10 20008549 20008873 -120307892 + AluJb SINE Alu 1 300 -12 514 309 105 41 chr10 20008873 20008907 -120307858 - L2 LINE L2 -1659 1655 1625 881 137 0 15 chr10 20008907 20009038 -120307727 - AluJ SINE Alu -173 129 1 514 309 105 41 chr10 20009038 20009218 -120307547 - L2 LINE L2 -1689 1625 1372 2362 110 0 0 chr10 20009223 20009533 -120307232 + AluSg SINE Alu 1 310 0 1909 147 3 7 chr10 20009725 20010010 -120306755 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr10 20010493 20010515 -120306250 + (A)n Simple_repeat Simple_repeat 1 22 0 1252 119 45 15 chr10 20010581 20010783 -120305982 + MER1B DNA MER1_type 132 339 0 1941 123 55 0 chr10 20011066 20011359 -120305406 + AluSp SINE Alu 1 309 -4 1858 169 10 0 chr10 20011375 20011671 -120305094 - AluJb SINE Alu -13 299 1 210 256 0 0 chr10 20012163 20012206 -120304559 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2067 124 31 0 chr10 20012264 20012555 -120304210 - AluSx SINE Alu -12 300 1 2307 103 3 0 chr10 20013215 20013516 -120303249 + AluSx SINE Alu 1 302 -10 266 313 62 18 chr10 20013765 20013877 -120302888 - L2 LINE L2 0 3313 3197 455 313 120 6 chr10 20014142 20014432 -120302333 + L2 LINE L2 2732 3053 -260 1254 186 115 0 chr10 20014440 20014693 -120302072 - AluJo SINE Alu -30 282 1 1483 214 33 52 chr10 20014750 20015114 -120301651 + MLT1A1 LTR MaLR 1 357 -8 263 299 104 7 chr10 20015117 20015271 -120301494 + L2 LINE L2 3115 3283 -30 250 336 100 0 chr10 20015301 20015411 -120301354 + L3 LINE CR1 430 550 -1027 658 266 76 55 chr10 20015552 20016079 -120300686 + MER34 LTR ERV1 1 538 -4 193 283 100 30 chr10 20016219 20016413 -120300352 + L3 LINE CR1 1151 1399 -178 2371 74 0 37 chr10 20016752 20017075 -120299690 + AluY SINE Alu 1 311 0 437 250 81 7 chr10 20017382 20017518 -120299247 + MLT1J2 LTR MaLR 1 146 -304 2359 104 3 0 chr10 20018010 20018318 -120298447 - AluSp SINE Alu -4 309 1 1517 198 14 4 chr10 20018537 20018815 -120297950 + AluJo SINE Alu 1 281 -31 332 203 0 0 chr10 20018838 20018897 -120297868 + L1MB3 LINE L1 5671 5729 -442 1735 151 14 7 chr10 20018981 20019273 -120297492 + L1MB3 LINE L1 5704 5997 -186 1116 106 65 0 chr10 20019277 20019447 -120297318 + MSTA LTR MaLR 1 181 -247 1929 141 28 3 chr10 20019447 20019738 -120297027 - AluSx SINE Alu -14 298 1 1608 153 21 24 chr10 20020871 20021159 -120295606 - AluJo SINE Alu -14 298 12 806 178 32 81 chr10 20021352 20021599 -120295166 + MER106A DNA MER1_type 2 236 0 215 350 40 0 chr10 20021850 20021950 -120294815 - L2 LINE L2 -1 3271 3168 1976 128 0 17 chr10 20021992 20022288 -120294477 + AluSx SINE Alu 1 291 -21 369 293 171 43 chr10 20022446 20022938 -120293827 - L2 LINE L2 -337 2977 2423 801 204 0 7 chr10 20023218 20023370 -120293395 + FRAM SINE Alu 1 151 -25 1390 218 3 17 chr10 20023496 20023785 -120292980 - AluJo SINE Alu -27 285 1 2113 107 12 47 chr10 20024990 20025309 -120291456 + AluSx SINE Alu 1 308 -4 340 264 182 0 chr10 20026232 20026353 -120290412 + MIR SINE MIR 41 183 -79 2511 50 10 3 chr10 20026522 20026822 -120289943 - AluY SINE Alu -7 304 3 674 242 6 0 chr10 20027227 20027384 -120289381 + MER5A DNA MER1_type 5 162 -27 2009 115 46 26 chr10 20027420 20027725 -120289040 - AluSq SINE Alu -2 311 1 878 194 6 18 chr10 20027772 20027937 -120288828 + FRAM SINE Alu 2 164 -2 891 200 0 18 chr10 20028261 20028426 -120288339 - FRAM SINE Alu -4 162 1 2094 129 0 23 chr10 20028450 20028759 -120288006 + AluSc SINE Alu 1 302 -7 1630 149 11 39 chr10 20029398 20029680 -120287085 + AluJo SINE Alu 1 274 -38 411 21 0 0 chr10 20029683 20029731 -120287034 + (CA)n Simple_repeat Simple_repeat 1 48 0 215 182 45 0 chr10 20030531 20030575 -120286190 + GA-rich Low_complexity Low_complexity 4 49 0 774 157 0 0 chr10 20030577 20030698 -120286067 - FLAM_C SINE Alu -22 121 1 1859 89 25 29 chr10 20034857 20035137 -120281628 + L1MA1 LINE L1 6017 6295 -7 28 48 0 0 chr10 20035137 20035179 -120281586 + AT_rich Low_complexity Low_complexity 1 42 0 1333 183 45 32 chr10 20036123 20036566 -120280199 - L1MB8 LINE L1 -6 6172 5597 1853 139 22 0 chr10 20036690 20036964 -120279801 + AluSx SINE Alu 1 280 -32 243 0 0 0 chr10 20036966 20036993 -120279772 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3251 132 33 4 chr10 20037353 20037832 -120278933 + MER1A DNA MER1_type 37 529 0 686 262 185 22 chr10 20038000 20038125 -120278640 - HAL1 LINE L1 -866 1641 1538 2126 135 3 0 chr10 20038125 20038436 -120278329 - AluSx SINE Alu 0 312 1 686 262 185 22 chr10 20038436 20038990 -120277775 - HAL1 LINE L1 -969 1538 851 2272 130 0 0 chr10 20039246 20039553 -120277212 - AluSx SINE Alu -5 307 1 1068 168 25 29 chr10 20039864 20040053 -120276712 - AluJo SINE Alu -10 302 113 1614 138 22 11 chr10 20040053 20040328 -120276437 + AluSq SINE Alu 24 301 -12 1068 168 25 29 chr10 20040328 20040376 -120276389 - AluJo SINE Alu -199 113 66 234 152 0 43 chr10 20040500 20040546 -120276219 - Alu SINE Alu -189 111 68 1755 194 3 13 chr10 20041011 20041326 -120275439 + AluJo SINE Alu 1 312 0 631 218 56 22 chr10 20041594 20041773 -120274992 - L1MB2 LINE L1 -36 6135 5951 451 206 21 0 chr10 20041770 20041867 -120274898 - L1MA4A LINE L1 -23 6280 6182 * 1306 158 65 1 chr10 20041875 20042238 -120274527 - L1MB1 LINE L1 -131 6052 5702 1808 140 19 0 chr10 20042240 20042505 -120274260 - AluSx SINE Alu -7 305 36 321 257 40 8 chr10 20042656 20042779 -120273986 - MIR SINE MIR -62 146 36 1798 168 20 3 chr10 20043760 20044063 -120272702 - AluJo SINE Alu -4 308 1 423 181 76 29 chr10 20044080 20044185 -120272580 - MER103 DNA DNA -2 164 55 2180 123 0 3 chr10 20044801 20045094 -120271671 - AluSx SINE Alu -20 292 1 448 321 41 14 chr10 20046206 20046427 -120270338 + MIR SINE MIR 31 257 -5 286 243 0 27 chr10 20046449 20046523 -120270242 - MIR SINE MIR -155 107 36 1210 159 10 5 chr10 20046552 20046759 -120270006 - MLT1A1 LTR MaLR -157 208 1 2183 138 0 0 chr10 20046831 20047129 -120269636 + AluSx SINE Alu 1 298 -14 936 84 0 0 chr10 20047805 20047936 -120268829 + (TA)n Simple_repeat Simple_repeat 2 132 0 2298 106 0 0 chr10 20047999 20048301 -120268464 - AluSc SINE Alu -7 302 1 2450 67 3 3 chr10 20048396 20048693 -120268072 + AluSq SINE Alu 1 297 -16 1712 169 54 10 chr10 20048925 20049221 -120267544 + AluJb SINE Alu 1 309 -3 2185 113 13 3 chr10 20049798 20050098 -120266667 + AluSg SINE Alu 1 303 -7 280 342 86 7 chr10 20050746 20050898 -120265867 - MIR SINE MIR -52 210 47 225 259 47 35 chr10 20050902 20050987 -120265778 + MER58B DNA MER1_type 255 340 -1 2149 135 0 3 chr10 20051310 20051613 -120265152 + AluSq SINE Alu 1 302 -11 328 254 108 87 chr10 20052323 20052611 -120264154 + MLT1H LTR MaLR 114 407 -142 2274 106 3 0 chr10 20052774 20053075 -120263690 + AluSx SINE Alu 1 302 -10 2065 109 0 0 chr10 20053576 20053850 -120262915 - AluSx SINE Alu -4 308 35 223 37 0 0 chr10 20054281 20054308 -120262457 + (TTTG)n Simple_repeat Simple_repeat 2 160 0 1784 103 0 0 chr10 20054308 20054540 -120262225 - AluSc SINE Alu -28 281 50 2261 109 0 0 chr10 20054651 20054973 -120261792 + MER57B LTR ERV1 1 322 -112 923 262 91 80 chr10 20055823 20056361 -120260404 - MER41C LTR ERV1 -9 545 2 971 163 43 59 chr10 20056477 20056523 -120260242 - MLT2B1 LTR ERVL 0 520 475 204 40 0 0 chr10 20056523 20056548 -120260217 + (CA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 20056547 20056568 -120260197 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 971 163 43 59 chr10 20056548 20056961 -120259804 - MLT2B1 LTR ERVL -45 475 1 26 0 0 0 chr10 20057082 20057108 -120259657 + AT_rich Low_complexity Low_complexity 1 26 0 2256 121 0 6 chr10 20057501 20057816 -120258949 - AluSp SINE Alu 0 313 1 2019 125 7 20 chr10 20058919 20059214 -120257551 - AluSq SINE Alu -22 291 1 24 32 0 0 chr10 20060200 20060231 -120256534 + AT_rich Low_complexity Low_complexity 1 31 0 1701 204 64 9 chr10 20060351 20060787 -120255978 - MER66B LTR ERV1 0 486 27 552 279 126 10 chr10 20060902 20061300 -120255465 - L1ME3A LINE L1 -217 5936 5493 563 283 111 78 chr10 20061311 20061599 -120255166 - L1ME3A LINE L1 -748 5381 5104 1381 229 0 14 chr10 20061599 20061915 -120254850 + AluJo SINE Alu 1 312 0 563 283 111 78 chr10 20061915 20062772 -120253993 - L1ME3A LINE L1 -1025 5104 4277 701 210 0 0 chr10 20062772 20062896 -120253869 + FLAM_C SINE Alu 1 124 -9 563 283 111 78 chr10 20062896 20063170 -120253595 - L1ME3A LINE L1 -1852 4277 4013 1928 84 4 0 chr10 20063170 20063421 -120253344 - AluSp SINE Alu -13 300 49 563 283 111 78 chr10 20063421 20064036 -120252729 - L1ME3A LINE L1 -2116 4013 3278 308 255 36 31 chr10 20064202 20064394 -120252371 - L1ME3A LINE L1 -3139 2990 2798 2166 119 10 0 chr10 20064619 20064921 -120251844 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr10 20064927 20064948 -120251817 + AT_rich Low_complexity Low_complexity 1 21 0 350 314 46 17 chr10 20065356 20065681 -120251084 - L1MEd LINE L1 -4762 1548 1173 927 126 0 15 chr10 20065759 20065894 -120250871 + FLAM_C SINE Alu 1 133 0 1613 158 10 38 chr10 20065921 20066212 -120250553 + AluJo SINE Alu 19 301 -11 1088 169 5 30 chr10 20066645 20066846 -120249919 + AluJb SINE Alu 89 284 -28 1609 177 10 30 chr10 20067196 20067495 -120249270 - AluJo SINE Alu -19 293 1 2208 133 0 0 chr10 20067977 20068277 -120248488 - AluSg SINE Alu -10 300 1 321 47 0 0 chr10 20068653 20068696 -120248069 + (TG)n Simple_repeat Simple_repeat 2 44 0 1641 167 11 11 chr10 20068765 20069081 -120247684 + AluJb SINE Alu 1 316 0 210 174 0 0 chr10 20069313 20069359 -120247406 + (TA)n Simple_repeat Simple_repeat 2 47 0 181 367 51 10 chr10 20069430 20069528 -120247237 - L2 LINE L2 -343 2971 2870 363 117 17 0 chr10 20069897 20069957 -120246808 - HY1 scRNA scRNA -5 107 47 369 0 0 0 chr10 20070088 20070129 -120246636 + (TTG)n Simple_repeat Simple_repeat 2 42 0 248 247 14 27 chr10 20070470 20070543 -120246222 - LTR33A LTR ERVL -8 515 444 257 192 0 0 chr10 20070718 20070770 -120245995 - Charlie1 DNA MER1_type -1 2760 2709 929 164 0 0 chr10 20070781 20070915 -120245850 - AluJo SINE Alu -178 134 1 308 247 0 0 chr10 20070919 20070996 -120245769 - Charlie1 DNA MER1_type -45 2716 2640 954 246 0 9 chr10 20071012 20071236 -120245529 - Charlie1 DNA MER1_type -2539 222 1 1952 149 0 3 chr10 20071724 20072013 -120244752 - AluJb SINE Alu -24 288 1 367 243 84 9 chr10 20073531 20073638 -120243127 - Tigger2 DNA MER2_type 0 2718 2604 331 221 0 0 chr10 20173640 20173717 -120143048 + AluSp/q SINE Alu 226 302 -1 1686 176 3 3 chr10 20173941 20174243 -120142522 + AluSx SINE Alu 1 302 -10 519 270 16 8 chr10 20174599 20174725 -120142040 - MER5A DNA MER1_type -4 185 59 3799 196 40 19 chr10 20174825 20175870 -120140895 - L1MB3 LINE L1 -67 6116 5046 1939 155 94 13 chr10 20176706 20177100 -120139665 + MSTA LTR MaLR 3 428 0 1148 221 10 31 chr10 20177883 20178172 -120138593 + AluSg SINE Alu 1 283 -17 718 164 0 31 chr10 20178589 20178717 -120138048 + FLAM_C SINE Alu 3 126 -7 21 57 0 0 chr10 20179983 20180018 -120136747 + AT_rich Low_complexity Low_complexity 1 35 0 1935 106 0 87 chr10 20180169 20180247 -120136518 + Tigger3(Golem) DNA MER2_type 2702 2785 -243 1747 146 71 10 chr10 20180247 20180541 -120136224 - AluSx SINE Alu 0 312 1 1935 106 0 87 chr10 20180541 20180555 -120136210 + Tigger3(Golem) DNA MER2_type 2785 2799 -229 2278 97 0 23 chr10 20180555 20180865 -120135900 - AluSg SINE Alu -7 303 1 1935 106 0 87 chr10 20180865 20181129 -120135636 + Tigger3(Golem) DNA MER2_type 2799 3028 0 741 263 30 26 chr10 20181163 20181395 -120135370 - MSTD LTR MaLR 0 396 164 1191 149 0 6 chr10 20181396 20181570 -120135195 + AluSx SINE Alu 2 174 -138 27 29 0 0 chr10 20181705 20181739 -120135026 + AT_rich Low_complexity Low_complexity 1 34 0 1987 119 42 0 chr10 20181912 20182198 -120134567 - AluSg SINE Alu -12 298 1 1966 128 0 30 chr10 20182561 20182857 -120133908 - AluSx SINE Alu -25 287 1 26 0 0 0 chr10 20182859 20182885 -120133880 + AT_rich Low_complexity Low_complexity 1 26 0 1327 211 78 24 chr10 20182888 20183262 -120133503 + L1MB7 LINE L1 5500 5893 -291 371 195 12 0 chr10 20183275 20183357 -120133408 - Tigger4(Zombi) DNA MER2_type -41 2690 2608 1290 141 5 14 chr10 20183861 20184074 -120132691 - AluJb SINE Alu -16 296 86 305 346 98 8 chr10 20185080 20185213 -120131552 - MIR3 SINE MIR -36 172 28 2013 153 0 13 chr10 20185464 20185777 -120130988 + AluSx SINE Alu 1 309 -3 1055 257 22 4 chr10 20186547 20186773 -120129992 + MIR SINE MIR 23 252 -10 1242 109 0 6 chr10 20186858 20187033 -120129732 - AluSg/x SINE Alu -2 308 135 1341 150 85 65 chr10 20187638 20187931 -120128834 - AluJo SINE Alu -3 299 1 773 137 12 12 chr10 20188537 20188698 -120128067 + CT-rich Low_complexity Low_complexity 4 164 0 6931 41 3 0 chr10 20188804 20189656 -120127109 + L1PA4 LINE L1 5298 6152 -3 979 116 0 12 chr10 20189673 20189837 -120126928 + L1MA1 LINE L1 6141 6302 0 1041 233 105 102 chr10 20189854 20190845 -120125920 + MER31-int LTR ERV1 1377 2370 -2566 453 203 0 0 chr10 20190871 20190950 -120125815 - FRAM/FAM SINE Alu -98 78 1 1631 160 7 14 chr10 20191271 20191546 -120125219 - AluJb SINE Alu -13 299 27 672 256 18 31 chr10 20191646 20191873 -120124892 + HAL1b LINE L1 352 575 -773 808 160 0 0 chr10 20192081 20192212 -120124553 + FLAM_C SINE Alu 1 131 -2 2186 110 10 7 chr10 20192314 20192614 -120124151 + AluSg SINE Alu 1 301 -9 264 198 0 62 chr10 20192780 20192803 -120123962 + CT-rich Low_complexity Low_complexity 3 26 -52 2106 119 0 0 chr10 20192803 20193081 -120123684 - AluSx SINE Alu -34 278 1 264 198 0 62 chr10 20193081 20193138 -120123627 + CT-rich Low_complexity Low_complexity 26 78 0 26 0 0 0 chr10 20193600 20193626 -120123139 + AT_rich Low_complexity Low_complexity 1 26 0 400 228 13 0 chr10 20194509 20194588 -120122177 + Tigger3b DNA MER2_type 1 80 -1151 1970 110 0 0 chr10 20194589 20194853 -120121912 + AluSq SINE Alu 1 264 -49 477 108 0 0 chr10 20194866 20194940 -120121825 + Alu SINE Alu 238 311 -1 3531 143 62 16 chr10 20194956 20195456 -120121309 + Tigger3b DNA MER2_type 65 610 -2418 1865 138 19 44 chr10 20195456 20195775 -120120990 + AluSx SINE Alu 1 311 -1 3531 143 62 16 chr10 20195775 20196006 -120120759 + Tigger3b DNA MER2_type 610 829 -402 5769 119 24 5 chr10 20196768 20196810 -120119955 + L1PA15 LINE L1 5128 5168 -997 231 36 0 0 chr10 20196810 20196838 -120119927 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5769 119 24 5 chr10 20196838 20197810 -120118955 + L1PA15 LINE L1 5168 6165 0 1664 221 44 33 chr10 20199979 20200301 -120116464 - L1ME LINE L1 -394 5772 5455 1784 102 4 20 chr10 20200301 20200555 -120116210 + AluSq SINE Alu 55 304 -9 1664 221 44 33 chr10 20200555 20200916 -120115849 - L1ME LINE L1 -711 5455 5098 1035 259 65 24 chr10 20200922 20201258 -120115507 + L1ME1 LINE L1 5792 6141 -25 439 270 130 0 chr10 20201259 20201459 -120115306 + MLT1J2 LTR MaLR 16 241 -209 609 176 0 19 chr10 20202071 20202179 -120114586 + AluJo/FLAM SINE Alu 16 121 -191 2097 139 3 0 chr10 20202179 20202473 -120114292 - AluSx SINE Alu -17 295 1 23 33 0 0 chr10 20202474 20202504 -120114261 + AT_rich Low_complexity Low_complexity 1 30 0 308 265 128 0 chr10 20203525 20203627 -120113138 + L1MC4 LINE L1 6591 6705 -1337 1731 185 0 20 chr10 20204776 20205079 -120111686 + AluJb SINE Alu 1 297 -15 2168 115 10 0 chr10 20205803 20206099 -120110666 + AluSq SINE Alu 1 299 -14 317 83 0 21 chr10 20206264 20206312 -120110453 + AluSp SINE Alu 1 47 -252 22 0 0 0 chr10 20206649 20206671 -120110094 + AT_rich Low_complexity Low_complexity 1 22 0 1971 116 30 30 chr10 20206839 20207140 -120109625 + AluSg SINE Alu 1 301 -9 325 67 0 0 chr10 20207769 20207814 -120108951 - MADE1 DNA Mariner -2 78 34 1865 100 35 4 chr10 20207814 20208073 -120108692 + AluSp SINE Alu 34 300 -13 1930 153 33 3 chr10 20208180 20208480 -120108285 + AluJb SINE Alu 1 309 -3 263 304 71 77 chr10 20208796 20208964 -120107801 + MIR SINE MIR 3 169 -93 23 33 0 0 chr10 20209146 20209176 -120107589 + AT_rich Low_complexity Low_complexity 1 30 0 1561 158 29 73 chr10 20209996 20210198 -120106567 - MER2 DNA MER2_type -16 329 147 2023 114 47 3 chr10 20210198 20210496 -120106269 + AluSq SINE Alu 1 311 -2 1561 158 29 73 chr10 20210496 20210634 -120106131 - MER2 DNA MER2_type -198 147 4 2113 136 3 3 chr10 20211453 20211754 -120105011 - AluSx SINE Alu -11 301 1 901 236 124 4 chr10 20211757 20212032 -120104733 + MLT1B LTR MaLR 83 390 0 963 134 0 0 chr10 20212311 20212445 -120104320 + AluSg/x SINE Alu 153 286 -24 1155 142 13 36 chr10 20212455 20212788 -120103977 + LTR54 LTR ERV1 96 481 -29 2035 131 0 0 chr10 20212788 20213086 -120103679 + AluY SINE Alu 1 298 -13 1155 142 13 36 chr10 20213086 20213116 -120103649 + LTR54 LTR ERV1 481 510 0 867 237 43 26 chr10 20213165 20213397 -120103368 + MER31-int LTR ERV1 1949 2184 -4147 624 92 0 0 chr10 20213623 20213710 -120103055 + AluSg/x SINE Alu 217 303 -9 1992 125 46 0 chr10 20213962 20214243 -120102522 + AluSg SINE Alu 1 294 -16 262 297 0 27 chr10 20214255 20214329 -120102436 + MER31-int LTR ERV1 3124 3195 -4342 562 222 5 69 chr10 20214624 20214840 -120101925 + MER31-int LTR ERV1 648 849 -6688 272 218 35 46 chr10 20214915 20214992 -120101773 + MER31-int LTR ERV1 2827 2904 -3359 2435 109 0 0 chr10 20214992 20215304 -120101461 + AluSx SINE Alu 1 312 0 375 104 59 32 chr10 20215306 20215399 -120101366 + MER31-int LTR ERV1 1290 1379 -3557 557 108 81 0 chr10 20215400 20215511 -120101254 + L1MA1 LINE L1 6009 6128 -174 * 4939 41 2 0 chr10 20215508 20216148 -120100617 + L1P LINE L1 4576 5216 -930 1107 123 0 22 chr10 20216405 20216584 -120100181 + AluSg/x SINE Alu 135 309 -1 1014 264 22 4 chr10 20216665 20216892 -120099873 - MIR SINE MIR -10 252 22 249 33 0 0 chr10 20217728 20217758 -120099007 + (CA)n Simple_repeat Simple_repeat 2 31 0 340 311 19 0 chr10 20218379 20218482 -120098283 + MIR SINE MIR 127 231 -31 2382 120 92 5 chr10 20218500 20218892 -120097873 - MSTA LTR MaLR 0 428 3 343 335 37 73 chr10 20219977 20220386 -120096379 + L2 LINE L2 2863 3256 -16 1783 158 191 8 chr10 20221564 20221926 -120094839 - MSTA LTR MaLR 0 428 1 2201 128 3 0 chr10 20222596 20222902 -120093863 - AluSx SINE Alu -5 307 1 1755 244 48 56 chr10 20223054 20223644 -120093121 - MLT1E LTR MaLR -8 585 1 2109 113 26 19 chr10 20223895 20224204 -120092561 + AluSx SINE Alu 1 311 -1 696 298 51 28 chr10 20224459 20224848 -120091917 - MLT1I LTR MaLR -8 401 4 2319 46 0 7 chr10 20224889 20225197 -120091568 + AluY SINE Alu 1 306 0 2270 100 3 25 chr10 20225295 20225614 -120091151 + AluSx SINE Alu 1 312 0 243 268 306 0 chr10 20225661 20225818 -120090947 + L2 LINE L2 3037 3241 -72 468 186 207 7 chr10 20226482 20226622 -120090143 + MSTD LTR MaLR 10 177 -219 621 154 9 0 chr10 20226636 20226746 -120090019 - Alu SINE Alu 0 311 201 22 0 0 0 chr10 20227492 20227514 -120089251 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 20228329 20228350 -120088415 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr10 20228350 20228379 -120088386 + (CA)n Simple_repeat Simple_repeat 2 30 0 1639 133 117 0 chr10 20228381 20228637 -120088128 - AluSq SINE Alu -27 286 1 2130 114 3 3 chr10 20229406 20229704 -120087061 - AluSg SINE Alu -12 298 1 30 0 0 0 chr10 20229743 20229773 -120086992 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr10 20229997 20230032 -120086733 + AT_rich Low_complexity Low_complexity 1 35 0 2188 95 0 13 chr10 20230346 20230651 -120086114 + AluY SINE Alu 1 301 -10 1956 125 10 20 chr10 20230965 20231268 -120085497 + AluSx SINE Alu 1 300 -12 1488 170 82 0 chr10 20231821 20232103 -120084662 - AluSx SINE Alu -2 310 6 186 103 0 0 chr10 20232272 20232301 -120084464 + (TCC)n Simple_repeat Simple_repeat 2 30 0 1091 193 83 15 chr10 20232327 20232592 -120084173 - AluJo SINE Alu -19 283 1 1362 130 5 14 chr10 20233240 20233455 -120083310 + AluJb SINE Alu 86 298 -14 190 154 77 0 chr10 20233908 20233947 -120082818 - MIR SINE MIR -4 258 217 188 227 156 70 chr10 20234175 20234303 -120082462 - MIR SINE MIR 0 262 124 264 271 151 60 chr10 20234417 20234583 -120082182 + MIR SINE MIR 69 249 -13 1982 125 42 0 chr10 20236381 20236670 -120080095 - AluSx SINE Alu -11 301 1 187 313 109 47 chr10 20236671 20236799 -120079966 - MIR SINE MIR -112 150 15 243 290 240 0 chr10 20236976 20237076 -120079689 + L2 LINE L2 3190 3313 0 2235 104 0 3 chr10 20237187 20237484 -120079281 - AluSx SINE Alu -16 296 1 370 188 46 88 chr10 20237676 20237910 -120078855 + MER106A DNA MER1_type 7 236 0 1120 92 0 0 chr10 20237931 20238073 -120078692 - AluSx SINE Alu -36 276 135 1985 126 30 7 chr10 20238412 20238713 -120078052 + AluSg SINE Alu 1 308 -2 446 333 154 0 chr10 20239086 20239287 -120077478 + MIR SINE MIR 31 262 0 861 131 25 0 chr10 20240171 20240293 -120076472 - AluSx SINE Alu -187 125 1 195 100 0 0 chr10 20240456 20240486 -120076279 + (TCC)n Simple_repeat Simple_repeat 2 31 0 1273 174 87 19 chr10 20240512 20240777 -120075988 - AluJo SINE Alu -29 283 1 2266 105 0 0 chr10 20241878 20242184 -120074581 - AluSg1 SINE Alu -3 306 1 247 252 23 62 chr10 20242212 20242381 -120074384 - L1ME LINE L1 -258 5912 5754 30 0 0 0 chr10 20242616 20242646 -120074119 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 20245529 20245550 -120071215 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 20246180 20246231 -120070534 + AT_rich Low_complexity Low_complexity 1 51 0 1465 98 29 98 chr10 20247170 20247314 -120069451 - Tigger4(Zombi) DNA MER2_type -202 2529 2377 2313 114 0 0 chr10 20247314 20247622 -120069143 - AluSx SINE Alu -4 308 1 1465 98 29 98 chr10 20247622 20247635 -120069130 - Tigger4(Zombi) DNA MER2_type -354 2377 2365 2619 39 0 13 chr10 20247635 20247943 -120068822 - AluY SINE Alu -7 304 1 1465 98 29 98 chr10 20247943 20248100 -120068665 - Tigger4(Zombi) DNA MER2_type -366 2365 2236 659 164 100 0 chr10 20248106 20248246 -120068519 - Tigger4(Zombi) DNA MER2_type -2570 161 8 814 198 139 4 chr10 20248254 20248492 -120068273 + L1MB7 LINE L1 5914 6183 -1 654 196 125 22 chr10 20249246 20249430 -120067335 + MER63A DNA MER1_type 1 203 -7 1519 210 10 3 chr10 20250420 20250711 -120066054 - AluJo SINE Alu -19 293 1 1781 170 0 26 chr10 20250824 20251135 -120065630 + AluJb SINE Alu 1 303 -9 258 268 62 77 chr10 20251296 20251568 -120065197 + L1ME4a LINE L1 5750 6017 -104 727 205 92 20 chr10 20251739 20251934 -120064831 - L1ME2 LINE L1 -13 6151 5943 566 259 88 29 chr10 20252323 20252724 -120064041 - L1MC4a LINE L1 -630 5540 5480 2103 122 0 7 chr10 20252983 20253287 -120063478 - AluSg SINE Alu -8 302 1 778 171 14 7 chr10 20253362 20253386 -120063379 - AluJo SINE Alu -171 141 119 194 0 39 0 chr10 20253386 20253412 -120063353 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 778 171 14 7 chr10 20253412 20253527 -120063238 - AluJo SINE Alu -193 119 1 207 0 0 0 chr10 20253529 20253552 -120063213 + (T)n Simple_repeat Simple_repeat 1 23 0 718 252 13 30 chr10 20253737 20253967 -120062798 - HAL1b LINE L1 -773 575 350 2133 120 7 3 chr10 20254030 20254339 -120062426 - AluSx SINE Alu -2 310 1 423 275 109 31 chr10 20254630 20254979 -120061786 - L1MC4a LINE L1 -1911 5897 5522 1639 127 0 0 chr10 20255237 20255473 -120061292 + AluSx SINE Alu 1 236 -76 1544 202 7 3 chr10 20255573 20255860 -120060905 - AluJb SINE Alu -19 293 6 26 30 0 0 chr10 20256040 20256073 -120060692 + AT_rich Low_complexity Low_complexity 1 33 0 2319 104 0 0 chr10 20256340 20256649 -120060116 - AluSc SINE Alu 0 309 1 636 142 18 0 chr10 20257459 20257572 -120059193 + FLAM_C SINE Alu 1 115 -18 207 167 0 0 chr10 20257614 20257656 -120059109 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 2109 119 0 3 chr10 20259584 20259886 -120056879 - AluSx SINE Alu -10 302 2 268 312 54 57 chr10 20260481 20260765 -120056000 - L2 LINE L2 -264 3008 2737 334 204 175 39 chr10 20260895 20260998 -120055767 + MER5B DNA MER1_type 62 178 0 2324 101 3 22 chr10 20261423 20261741 -120055024 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 20261751 20261780 -120054985 + AT_rich Low_complexity Low_complexity 1 29 0 1707 146 27 0 chr10 20261780 20262040 -120054725 - AluSx SINE Alu -45 267 1 2434 70 0 3 chr10 20262285 20262587 -120054178 - AluY SINE Alu -10 301 1 1713 175 4 0 chr10 20262711 20262991 -120053774 - AluSg SINE Alu -29 281 1 657 252 0 0 chr10 20262999 20263126 -120053639 - FLAM_C SINE Alu -6 127 1 2382 94 0 3 chr10 20263169 20263477 -120053288 - AluY SINE Alu -4 307 1 989 142 47 0 chr10 20263931 20264079 -120052686 + AluJb SINE Alu 135 289 -23 865 211 76 87 chr10 20265167 20265275 -120051490 + MER39 LTR ERV1 228 336 -317 2206 135 0 0 chr10 20265275 20265579 -120051186 + AluSx SINE Alu 1 304 -8 865 211 76 87 chr10 20265579 20265943 -120050822 + MER39 LTR ERV1 336 653 0 1783 178 14 0 chr10 20266069 20266350 -120050415 + AluJo SINE Alu 1 285 -27 1065 139 18 0 chr10 20266351 20266517 -120050248 + AluSg/x SINE Alu 133 301 -11 615 332 61 40 chr10 20266517 20267016 -120049749 - L2 LINE L2 -18 3295 2778 2089 111 44 0 chr10 20267016 20267314 -120049451 - AluSq SINE Alu -2 311 1 615 332 61 40 chr10 20267314 20267458 -120049307 - L2 LINE L2 -535 2778 2638 1841 169 10 3 chr10 20268318 20268619 -120048146 - AluJo SINE Alu -9 303 1 1963 140 0 0 chr10 20269850 20270136 -120046629 - AluJb SINE Alu -26 286 1 192 315 19 0 chr10 20270157 20270211 -120046554 - L2 LINE L2 -558 2756 2702 21 36 0 0 chr10 20270851 20270879 -120045886 + AT_rich Low_complexity Low_complexity 1 28 0 292 250 12 24 chr10 20271306 20271390 -120045375 + Tigger7 DNA MER2_type 3 85 -254 276 100 0 0 chr10 20271433 20271473 -120045292 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 1910 130 11 7 chr10 20271536 20271820 -120044945 + AluSx SINE Alu 3 287 -25 21 0 0 0 chr10 20271821 20271842 -120044923 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 0 43 chr10 20272609 20272749 -120044016 + Tigger7 DNA MER2_type 2270 2403 -88 567 175 0 48 chr10 20272763 20272952 -120043813 + (TA)n Simple_repeat Simple_repeat 1 180 0 223 222 19 19 chr10 20272954 20273008 -120043757 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 518 148 0 0 chr10 20273009 20273090 -120043675 + Tigger7 DNA MER2_type 2401 2481 -6 580 177 38 118 chr10 20273182 20273368 -120043397 + L1MD3 LINE L1 6800 6970 -1025 208 360 93 14 chr10 20273382 20273521 -120043244 - L2 LINE L2 -1452 1862 1713 22 0 0 0 chr10 20275477 20275499 -120041266 + AT_rich Low_complexity Low_complexity 1 22 0 436 241 38 0 chr10 20277881 20277912 -120038853 - L1MA10 LINE L1 -21 6313 6283 437 279 32 19 chr10 20277912 20278070 -120038695 - L1ME1 LINE L1 -45 6121 5962 885 229 188 17 chr10 20278106 20278399 -120038366 - MLT1D LTR MaLR -117 388 46 1400 164 13 8 chr10 20278470 20278708 -120038057 - AluJb SINE Alu -73 239 1 564 167 28 28 chr10 20279085 20279193 -120037572 - AluSx SINE Alu -85 225 118 580 40 0 0 chr10 20279200 20279274 -120037491 - AluSx SINE Alu -238 74 1 3307 125 105 66 chr10 20280044 20280709 -120036056 + LTR8 LTR ERV1 1 691 0 888 230 17 6 chr10 20281263 20281437 -120035328 + MER5A DNA MER1_type 14 189 0 2241 103 3 3 chr10 20281789 20282091 -120034674 - AluSx SINE Alu -10 302 1 2241 112 7 0 chr10 20282309 20282613 -120034152 - AluSq SINE Alu -5 308 3 2425 177 52 14 chr10 20282617 20283113 -120033652 - L1MC1 LINE L1 -5 6328 5814 277 214 14 0 chr10 20283157 20283227 -120033538 - L1ME3A LINE L1 -15 6155 6085 403 264 112 28 chr10 20283814 20283992 -120032773 + MLT1J2 LTR MaLR 254 446 -4 226 274 78 30 chr10 20284280 20284550 -120032215 - L1MEd LINE L1 -3653 2729 2447 1179 248 18 16 chr10 20284671 20285054 -120031711 + L1ME1 LINE L1 4769 5152 -994 2071 108 50 0 chr10 20285057 20285335 -120031430 - AluSp SINE Alu -21 292 1 1717 251 134 14 chr10 20285338 20286128 -120030637 + L1ME1 LINE L1 5277 6161 -5 292 328 56 7 chr10 20286195 20286479 -120030286 - L1MEd LINE L1 -4814 1570 1273 371 279 64 47 chr10 20286618 20286790 -120029975 - L1MEd LINE L1 -5934 438 264 26 0 0 0 chr10 20286843 20286869 -120029896 + AT_rich Low_complexity Low_complexity 1 26 0 32 26 0 0 chr10 20287621 20287660 -120029105 + AT_rich Low_complexity Low_complexity 1 39 0 326 41 0 41 chr10 20288915 20288964 -120027801 + (TCCCC)n Simple_repeat Simple_repeat 5 51 0 2080 121 0 0 chr10 20288966 20289246 -120027519 - AluSx SINE Alu -32 280 1 2021 148 0 7 chr10 20289369 20289666 -120027099 - AluSx SINE Alu -17 295 1 29 28 0 0 chr10 20289925 20289961 -120026804 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr10 20290416 20290444 -120026321 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 20290741 20290771 -120025994 + AT_rich Low_complexity Low_complexity 1 30 0 1258 289 131 38 chr10 20290815 20290869 -120025896 + L2 LINE L2 1945 1993 -1321 2373 93 3 0 chr10 20290869 20291171 -120025594 - AluSp SINE Alu -10 303 1 1258 289 131 38 chr10 20291171 20291469 -120025296 + L2 LINE L2 1993 2262 -1052 2159 120 0 29 chr10 20291469 20291777 -120024988 - AluSx SINE Alu -13 299 1 1258 289 131 38 chr10 20291777 20292049 -120024716 + L2 LINE L2 2262 2628 -686 667 309 138 13 chr10 20292049 20292441 -120024324 - MLT1J2 LTR MaLR 0 450 10 1247 263 48 103 chr10 20292443 20292521 -120024244 + L2 LINE L2 2691 2772 -541 188 0 74 0 chr10 20292521 20292548 -120024217 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1247 263 48 103 chr10 20292548 20292674 -120024091 + L2 LINE L2 2772 2903 -410 3379 96 4 0 chr10 20292674 20293163 -120023602 - L1MA2 LINE L1 0 6304 5814 1247 263 48 103 chr10 20293163 20293390 -120023375 + L2 LINE L2 2903 3077 -236 2186 118 3 0 chr10 20293390 20293687 -120023078 - AluSq SINE Alu -15 298 1 1247 263 48 103 chr10 20293687 20293892 -120022873 + L2 LINE L2 3077 3292 -21 1776 164 90 81 chr10 20294534 20295065 -120021700 + LTR10A LTR ERV1 13 548 -61 453 68 0 68 chr10 20295145 20295187 -120021578 - THE1C LTR MaLR -306 69 33 2428 203 25 61 chr10 20295187 20295822 -120020943 + LTR9 LTR ERV1 1 612 0 453 68 0 68 chr10 20295822 20295853 -120020912 - THE1C LTR MaLR -342 33 1 260 275 175 0 chr10 20295949 20296029 -120020736 + MLT1H LTR MaLR 258 351 -198 2088 158 0 0 chr10 20297249 20297559 -120019206 - AluSx SINE Alu -2 310 1 955 129 0 0 chr10 20297562 20297694 -120019071 - AluSq/x SINE Alu -181 132 1 2042 152 0 7 chr10 20298509 20298818 -120017947 - AluJb SINE Alu -5 307 1 278 188 125 62 chr10 20299124 20299204 -120017561 + L2 LINE L2 3227 3311 -2 291 254 0 0 chr10 20299226 20299285 -120017480 - L2 LINE L2 -17 3255 3197 2063 138 3 28 chr10 20299429 20299749 -120017016 - AluSq SINE Alu -1 312 1 929 336 65 18 chr10 20300419 20300877 -120015888 + L2 LINE L2 1713 2192 -1122 2901 90 12 117 chr10 20301028 20301387 -120015378 - L1PB1 LINE L1 0 6151 5756 192 77 0 0 chr10 20301387 20301413 -120015352 + (TA)n Simple_repeat Simple_repeat 2 27 0 2901 90 12 117 chr10 20301413 20301580 -120015185 - L1PB1 LINE L1 -395 5756 5693 186 43 0 0 chr10 20301580 20301603 -120015162 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 2901 90 12 117 chr10 20301603 20301673 -120015092 - L1PB1 LINE L1 -458 5693 5617 886 340 110 26 chr10 20301678 20302246 -120014519 + L2 LINE L2 2470 3140 -173 3350 132 13 17 chr10 20302246 20302775 -120013990 - MER1A DNA MER1_type 0 527 1 886 340 110 26 chr10 20302775 20302965 -120013800 + L2 LINE L2 3140 3313 0 24 0 0 0 chr10 20303696 20303720 -120013045 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 20303760 20303782 -120012983 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 20303904 20303928 -120012837 + AT_rich Low_complexity Low_complexity 1 24 0 32 43 0 0 chr10 20304137 20304183 -120012582 + AT_rich Low_complexity Low_complexity 1 46 0 2109 114 0 23 chr10 20304369 20304676 -120012089 - AluSg SINE Alu -10 300 1 1471 297 101 26 chr10 20305710 20306703 -120010062 - L2 LINE L2 0 3313 2238 1911 142 44 25 chr10 20306736 20307103 -120009662 + THE1C LTR MaLR 1 374 -1 480 277 173 12 chr10 20307494 20307743 -120009022 - L2 LINE L2 0 3313 3025 1731 182 3 10 chr10 20308297 20308599 -120008166 - AluJo SINE Alu -12 300 1 779 148 49 0 chr10 20308806 20308948 -120007817 - L1MA3 LINE L1 0 6305 6157 2150 99 44 10 chr10 20308977 20309271 -120007494 + AluSq SINE Alu 1 304 -9 386 285 87 50 chr10 20309441 20309683 -120007082 + MIR SINE MIR 4 254 -8 4589 188 50 16 chr10 20310160 20311787 -120004978 - L1MB3 LINE L1 -2 6181 4488 2463 112 22 0 chr10 20311787 20312143 -120004622 - THE1B LTR MaLR 0 364 1 4589 188 50 16 chr10 20312143 20312325 -120004440 - L1MB3 LINE L1 -1695 4488 4314 1970 155 0 7 chr10 20312616 20312912 -120003853 - AluSx SINE Alu -18 294 1 2182 97 0 3 chr10 20312976 20313266 -120003499 - AluSq SINE Alu -24 289 1 243 394 39 0 chr10 20313298 20313402 -120003363 + MIR SINE MIR 52 159 -103 2025 140 0 10 chr10 20314604 20314912 -120001853 + AluSx SINE Alu 1 305 -7 206 309 145 65 chr10 20316095 20316496 -120000269 - L2 LINE L2 -337 2977 2545 365 49 18 35 chr10 20316509 20316569 -120000196 + AluJb SINE Alu 87 139 -163 376 221 74 156 chr10 20316609 20316853 -119999912 - MIR SINE MIR -21 241 18 866 252 116 26 chr10 20318724 20319181 -119997584 - L1ME4a LINE L1 -5 6116 5619 4050 166 20 4 chr10 20319200 20319900 -119996865 + MER50 LTR ERV1 1 711 -23 620 183 14 114 chr10 20319957 20320176 -119996589 - L1MB7 LINE L1 -66 6118 5922 1727 243 50 38 chr10 20320275 20320773 -119995992 + MLT1F LTR MaLR 38 541 -1 1167 265 121 44 chr10 20321170 20321745 -119995020 + MLT1G LTR MaLR 1 590 0 225 101 89 30 chr10 20321981 20322150 -119994615 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 20322242 20322266 -119994499 + AT_rich Low_complexity Low_complexity 1 24 0 2184 175 40 52 chr10 20322266 20322712 -119994053 - MLT2B2 LTR ERVL -74 441 1 410 315 112 39 chr10 20322815 20323101 -119993664 - L2 LINE L2 -2 3311 3005 5204 139 14 13 chr10 20324637 20326604 -119990161 - L1PA15 LINE L1 -4 6161 4111 21 36 0 0 chr10 20326783 20326811 -119989954 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 20327717 20327740 -119989025 + AT_rich Low_complexity Low_complexity 1 23 0 229 229 0 16 chr10 20328357 20328418 -119988347 - LTR66 LTR ERVL -157 453 394 337 282 92 43 chr10 20329157 20329320 -119987445 + MIR3 SINE MIR 21 191 -17 228 35 0 0 chr10 20329572 20329601 -119987164 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 2258 116 0 0 chr10 20329601 20329911 -119986854 - AluSx SINE Alu -2 310 1 334 287 148 0 chr10 20329983 20330105 -119986660 - MER5A DNA MER1_type -1 188 49 2432 76 0 10 chr10 20330237 20330540 -119986225 - AluY SINE Alu -11 300 1 2329 97 57 14 chr10 20331561 20331910 -119984855 + THE1B LTR MaLR 1 364 0 275 354 30 30 chr10 20332000 20332164 -119984601 + MER5A DNA MER1_type 24 187 -2 859 199 5 0 chr10 20332559 20332755 -119984010 - L1 LINE L1 -1648 4498 4302 4309 128 15 0 chr10 20332755 20333404 -119983361 + L1PA16 LINE L1 5497 6157 -9 329 258 188 23 chr10 20333417 20333545 -119983220 + MER5B DNA MER1_type 29 177 -1 1817 145 52 55 chr10 20334074 20334439 -119982326 - THE1B LTR MaLR 0 364 1 224 324 127 70 chr10 20334453 20334595 -119982170 - L2 LINE L2 0 3272 3123 278 327 25 25 chr10 20334740 20334902 -119981863 - L2 LINE L2 -182 3090 2929 2354 97 0 13 chr10 20334987 20335298 -119981467 - AluY SINE Alu -4 307 1 23 68 0 0 chr10 20337140 20337184 -119979581 + AT_rich Low_complexity Low_complexity 1 44 0 631 294 71 5 chr10 20337369 20337580 -119979185 + L1PA16 LINE L1 2 226 -6561 1151 261 60 23 chr10 20337873 20338271 -119978494 + L1PA16 LINE L1 1267 1679 -5108 14519 223 26 18 chr10 20338285 20339961 -119976804 + L1PA16 LINE L1 1996 3657 -3160 2411 65 0 10 chr10 20339961 20340253 -119976512 + AluY SINE Alu 3 291 -20 14519 223 26 18 chr10 20340253 20343366 -119973399 + L1PA16 LINE L1 3657 6817 0 3068 194 36 58 chr10 20343482 20344277 -119972488 - L1MB8 LINE L1 -5 6173 5396 23 68 0 0 chr10 20344302 20344346 -119972419 + AT_rich Low_complexity Low_complexity 1 44 0 808 146 0 31 chr10 20345606 20345736 -119971029 - FLAM_C SINE Alu -7 126 1 872 250 97 38 chr10 20346185 20346243 -119970522 + MER45C DNA AcHobo 1 54 -899 1670 186 30 19 chr10 20346243 20346614 -119970151 - THE1C LTR MaLR 0 375 1 872 250 97 38 chr10 20346614 20346843 -119969922 + MER45C DNA AcHobo 54 305 -648 458 143 161 143 chr10 20346889 20346908 -119969857 + MER45C DNA AcHobo 783 800 -781 216 0 0 0 chr10 20346908 20346932 -119969833 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 458 143 161 143 chr10 20346932 20347080 -119969685 + MER45C DNA AcHobo 800 953 0 23 0 0 0 chr10 20347327 20347350 -119969415 + AT_rich Low_complexity Low_complexity 1 23 0 1691 197 27 0 chr10 20348948 20349248 -119967517 - AluJb SINE Alu -4 308 1 208 176 59 0 chr10 20349293 20349344 -119967421 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 180 0 0 0 chr10 20349466 20349486 -119967279 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr10 20349616 20349645 -119967120 + AT_rich Low_complexity Low_complexity 1 29 0 1650 177 33 10 chr10 20350875 20351180 -119965585 + AluJo SINE Alu 1 312 0 663 111 0 0 chr10 20352532 20352622 -119964143 + AluSg/x SINE Alu 208 297 -15 616 227 7 0 chr10 20352689 20352830 -119963935 - L1MA10 LINE L1 -13 6321 6180 359 169 8 34 chr10 20352851 20352969 -119963796 + CT-rich Low_complexity Low_complexity 3 117 0 1529 52 0 33 chr10 20352970 20353182 -119963583 + L1PA6 LINE L1 5950 6154 0 1708 197 72 69 chr10 20353878 20354655 -119962110 - L1MC/D LINE L1 -593 5751 4991 4185 55 21 69 chr10 20354657 20355770 -119960995 - MER11A LTR ERVK -2 1264 1 444 206 9 0 chr10 20355770 20355877 -119960888 - L1MC/D LINE L1 -1150 4996 4889 5653 237 57 19 chr10 20355979 20357845 -119958920 - L1MC/D LINE L1 -1262 4884 2949 342 80 0 0 chr10 20359003 20359053 -119957712 + (TC)n Simple_repeat Simple_repeat 2 51 0 1030 162 0 0 chr10 20359056 20359210 -119957555 - AluJb SINE Alu -23 289 136 598 233 91 28 chr10 20359845 20360021 -119956744 - MER5A DNA MER1_type -1 188 2 6592 51 6 3 chr10 20360447 20362085 -119954680 + L1PA4 LINE L1 4550 6152 -3 2305 108 3 0 chr10 20362603 20362900 -119953865 + AluSx SINE Alu 1 298 -14 414 300 90 60 chr10 20363047 20363347 -119953418 + MLT1H LTR MaLR 13 321 -228 899 261 0 0 chr10 20363393 20363569 -119953196 + MER58A DNA MER1_type 1 176 -48 412 173 205 47 chr10 20363615 20363742 -119953023 + MLT1H LTR MaLR 402 548 -1 191 345 133 0 chr10 20363856 20363969 -119952796 - MIR3 SINE MIR -4 204 77 21 36 0 0 chr10 20364343 20364371 -119952394 + AT_rich Low_complexity Low_complexity 1 28 0 491 323 117 22 chr10 20365216 20365619 -119951146 - L1M4 LINE L1 -2167 3979 3539 1083 158 42 9 chr10 20365635 20365850 -119950915 - L1PA14 LINE L1 -70 6091 5870 6429 80 7 1 chr10 20366007 20366879 -119949886 - L1PA7 LINE L1 -3 6151 5275 1109 82 0 0 chr10 20366880 20367027 -119949738 + L1PA7 LINE L1 5121 5267 -879 309 279 96 29 chr10 20367182 20367390 -119949375 - L1M4 LINE L1 -778 5368 5147 249 316 102 31 chr10 20367627 20367852 -119948913 - L1M4 LINE L1 -1343 4803 4563 352 313 147 11 chr10 20368499 20368854 -119947911 - L1MC4a LINE L1 -1878 5864 5462 28 0 0 0 chr10 20369010 20369038 -119947727 + AT_rich Low_complexity Low_complexity 1 28 0 516 275 106 88 chr10 20369165 20369231 -119947534 - L1MC4a LINE L1 -1089 4991 4928 1394 202 7 37 chr10 20369231 20369528 -119947237 - AluJo SINE Alu -23 289 2 516 275 106 88 chr10 20369528 20370140 -119946625 - L1MC4a LINE L1 -1152 4928 4301 1966 144 7 3 chr10 20371077 20371376 -119945389 - AluSx SINE Alu -12 300 1 4057 125 20 14 chr10 20372364 20373054 -119943711 + L1MA5A LINE L1 5600 6293 -4 309 277 75 75 chr10 20373102 20373290 -119943475 - L1MC4a LINE L1 -5881 189 2 30 0 0 0 chr10 20373614 20373644 -119943121 + AT_rich Low_complexity Low_complexity 1 30 0 325 291 29 39 chr10 20373841 20373944 -119942821 - MER5A DNA MER1_type -19 170 69 1671 187 0 23 chr10 20374522 20374827 -119941938 - AluJb SINE Alu -14 298 1 545 260 88 28 chr10 20375399 20375580 -119941185 + MIR SINE MIR 40 231 -31 339 339 17 0 chr10 20375629 20375744 -119941021 + MER5B DNA MER1_type 3 119 -59 269 219 110 14 chr10 20376758 20376831 -119939934 + MIR SINE MIR 90 169 -93 241 127 0 48 chr10 20376851 20376914 -119939851 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 198 174 22 22 chr10 20376918 20376964 -119939801 + MIR SINE MIR 212 257 -5 2224 120 47 33 chr10 20377506 20377865 -119938900 + THE1B LTR MaLR 1 364 0 269 246 223 31 chr10 20377951 20378081 -119938684 + LTR16C LTR ERVL 100 254 -237 381 242 45 8 chr10 20378124 20378256 -119938509 + LTR16C LTR ERVL 354 490 -1 1460 215 19 25 chr10 20378371 20378734 -119938031 + MLT1A1 LTR MaLR 1 361 -4 2050 132 0 16 chr10 20378816 20379119 -119937646 + AluSx SINE Alu 1 298 -14 432 308 98 62 chr10 20379628 20380014 -119936751 - MLT1J LTR MaLR 0 511 112 27 0 0 0 chr10 20382073 20382100 -119934665 + AT_rich Low_complexity Low_complexity 1 27 0 1792 135 48 10 chr10 20382331 20382620 -119934145 - AluSg SINE Alu -10 300 1 3705 124 0 8 chr10 20383087 20383618 -119933147 - MER1A DNA MER1_type 0 527 1 260 53 26 0 chr10 20383748 20383786 -119932979 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 259 0 86 chr10 20384747 20384828 -119931937 - Tigger2a DNA MER2_type 0 444 371 1129 162 125 88 chr10 20384837 20385109 -119931656 - AluJb SINE Alu -30 282 1 181 351 120 37 chr10 20385598 20385840 -119930925 + L3b LINE CR1 1227 1488 -95 957 254 14 0 chr10 20385888 20386108 -119930657 - MER58A DNA MER1_type -1 223 1 2095 107 10 7 chr10 20386284 20386575 -119930190 - AluSq SINE Alu -21 292 1 223 329 24 12 chr10 20386647 20386729 -119930036 + L2 LINE L2 3226 3308 -5 1549 303 58 14 chr10 20387542 20388096 -119928669 + L1MEc LINE L1 70 647 -5749 604 288 87 17 chr10 20388129 20388473 -119928292 + L1MEc LINE L1 996 1363 -5033 * 4546 246 97 40 chr10 20388454 20389718 -119927047 + L1MEc LINE L1 1740 2930 -3285 1971 149 3 0 chr10 20389718 20390014 -119926751 + AluSq SINE Alu 3 299 -14 4546 246 97 40 chr10 20390014 20391292 -119925473 + L1MEc LINE L1 2930 4399 -1816 484 191 27 27 chr10 20391290 20391400 -119925365 + L1PB4 LINE L1 6045 6154 -2 * 543 261 16 49 chr10 20391412 20391596 -119925169 + L1ME2 LINE L1 5935 6112 -52 4673 231 37 100 chr10 20391631 20394218 -119922547 - L1 LINE L1 -1537 4609 2186 2121 119 3 0 chr10 20394220 20394514 -119922251 - AluSx SINE Alu -17 295 1 352 201 14 42 chr10 20395583 20395727 -119921038 + Tigger7 DNA MER2_type 2270 2409 -82 378 222 0 48 chr10 20395780 20395969 -119920796 + (TA)n Simple_repeat Simple_repeat 1 180 0 442 200 0 0 chr10 20395986 20396066 -119920699 + Tigger7 DNA MER2_type 2405 2484 -7 207 333 0 0 chr10 20396077 20396143 -119920622 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 2404 241 136 36 chr10 20396159 20397122 -119919643 + L1MC4a LINE L1 6750 7808 0 300 91 0 0 chr10 20397175 20397219 -119919546 + (CA)n Simple_repeat Simple_repeat 1 44 0 690 201 0 30 chr10 20397285 20397419 -119919346 - FLAM_C SINE Alu -12 131 2 1923 160 7 0 chr10 20397450 20397744 -119919021 + AluSx SINE Alu 1 296 -16 2298 184 20 13 chr10 20397766 20398271 -119918494 + L1MC/D LINE L1 5185 5700 -633 1514 89 0 246 chr10 20398291 20398686 -119918079 + AluSq SINE Alu 1 298 -15 209 235 0 0 chr10 20400124 20400175 -119916590 + L2 LINE L2 3190 3240 -73 1944 146 3 10 chr10 20400615 20400916 -119915849 + AluJb SINE Alu 1 299 -13 285 300 18 27 chr10 20400935 20401045 -119915720 + MER5B DNA MER1_type 1 109 -69 598 144 39 0 chr10 20401381 20401485 -119915280 + L1PB1 LINE L1 75 182 -6681 * 6124 161 8 37 chr10 20401476 20403627 -119913138 + L1PB1 LINE L1 4780 6858 -9 3093 262 58 5 chr10 20404577 20405737 -119911028 - L1M4 LINE L1 -1430 4716 3496 645 161 60 7 chr10 20405737 20405886 -119910879 - L1MC3 LINE L1 -7 7778 7622 1443 250 68 71 chr10 20405890 20406494 -119910271 - LTR9B LTR ERV1 -36 608 7 1846 181 87 0 chr10 20406498 20406879 -119909886 - L1MC3 LINE L1 -1206 6579 6166 768 223 42 73 chr10 20406886 20407207 -119909558 - L1MCa LINE L1 -5058 1358 887 283 152 0 0 chr10 20407204 20407250 -119909515 - L1MDa LINE L1 -3423 3117 3072 * 1270 68 6 11 chr10 20407250 20407426 -119909339 - LTR7 LTR ERV1 -2 448 274 877 253 30 37 chr10 20407547 20407950 -119908815 - L1MDa LINE L1 -3571 2969 2570 1195 199 31 19 chr10 20407974 20408247 -119908518 - L1MB1 LINE L1 -23 6145 5897 * 1665 246 59 41 chr10 20408245 20408935 -119907830 - L1MDa LINE L1 -3950 2590 1914 2231 102 0 16 chr10 20408935 20409238 -119907527 + AluY SINE Alu 1 298 -13 1665 246 59 41 chr10 20409238 20409254 -119907511 - L1MDa LINE L1 -4626 1914 1900 1569 174 0 90 chr10 20409254 20409609 -119907156 - AluJb SINE Alu 0 312 1 1665 246 59 41 chr10 20409609 20409683 -119907082 - L1MDa LINE L1 -4640 1900 1795 1267 124 10 0 chr10 20409684 20409878 -119906887 + L1PA16 LINE L1 5859 6054 -112 186 306 50 63 chr10 20412168 20412390 -119904375 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 20412770 20412807 -119903958 + (TC)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr10 20412884 20412906 -119903859 + AT_rich Low_complexity Low_complexity 1 22 0 1254 162 71 12 chr10 20413045 20413298 -119903467 + AluJb SINE Alu 26 293 -19 1485 223 135 24 chr10 20414766 20415189 -119901576 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 20415189 20415500 -119901265 + AluY SINE Alu 12 322 0 1485 223 135 24 chr10 20415500 20415528 -119901237 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 20415578 20415849 -119900916 + LTR46-int LTR ERV1 675 944 -4642 577 303 47 73 chr10 20415875 20416492 -119900273 + LTR46-int LTR ERV1 4242 5371 -2347 228 35 0 0 chr10 20418489 20418518 -119898247 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 972 125 0 0 chr10 20418626 20418762 -119898003 + AluSg/x SINE Alu 161 296 -16 22 0 0 0 chr10 20419181 20419203 -119897562 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 20419337 20419361 -119897404 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 20419690 20419830 -119896935 + MIR SINE MIR 69 219 -43 1024 298 135 27 chr10 20420629 20421470 -119895295 - L2 LINE L2 -12 3301 2379 915 197 2 14 chr10 20421523 20421539 -119895226 - L1PB3 LINE L1 0 6151 6136 372 43 0 0 chr10 20421539 20421585 -119895180 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 915 197 2 14 chr10 20421585 20421759 -119895006 - L1PB3 LINE L1 -15 6136 5964 367 211 28 0 chr10 20421800 20421909 -119894856 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 20422096 20422178 -119894587 - MIR SINE MIR -171 91 9 218 325 137 8 chr10 20425142 20425259 -119891506 - L2 LINE L2 -260 3053 2922 1898 155 0 7 chr10 20426306 20426610 -119890155 - AluJo SINE Alu -10 302 1 1967 176 62 36 chr10 20427413 20427799 -119888966 - MSTD LTR MaLR 0 396 1 21 0 0 0 chr10 20428027 20428048 -119888717 + AT_rich Low_complexity Low_complexity 1 21 0 916 100 0 0 chr10 20428048 20428168 -119888597 - L1MA3 LINE L1 -5 6300 6181 836 204 34 17 chr10 20429994 20430170 -119886595 + MER5A DNA MER1_type 11 189 0 813 228 28 38 chr10 20430178 20430389 -119886376 + MER3 DNA MER1_type 1 209 0 423 189 126 45 chr10 20431372 20431483 -119885282 - MIR3 SINE MIR -6 202 83 215 211 0 0 chr10 20432633 20432671 -119884094 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 20433095 20433227 -119883538 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 20433328 20433423 -119883342 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 20434112 20434357 -119882408 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 20434584 20434837 -119881928 - AluSx SINE Alu -13 299 44 434 109 62 0 chr10 20435352 20435416 -119881349 - AluJo SINE Alu -178 134 67 1746 209 63 56 chr10 20435467 20435897 -119880868 - Tigger2a DNA MER2_type 0 434 2 2314 93 0 3 chr10 20435939 20436229 -119880536 + AluY SINE Alu 1 289 -22 21 0 0 0 chr10 20437040 20437061 -119879704 + AT_rich Low_complexity Low_complexity 1 21 0 2489 85 0 0 chr10 20437957 20438263 -119878502 + AluSg SINE Alu 1 306 -4 344 179 0 0 chr10 20438275 20438331 -119878434 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 20438576 20438693 -119878072 + L2 LINE L2 3158 3272 0 510 58 35 11 chr10 20439710 20439797 -119876968 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 20440659 20440996 -119875769 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 20441099 20441120 -119875645 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20441175 20441196 -119875569 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 20441291 20441837 -119874928 - L1P LINE L1 -1101 5045 4500 1692 150 66 4 chr10 20442267 20442541 -119874224 + AluSx SINE Alu 3 293 -19 1745 139 44 17 chr10 20443355 20443649 -119873116 - AluSg SINE Alu -8 302 1 601 290 97 13 chr10 20443676 20443914 -119872851 - MLT1L LTR MaLR -245 370 113 331 170 0 0 chr10 20444083 20444136 -119872629 - MER58A DNA MER1_type 0 224 172 1938 157 0 0 chr10 20444136 20444435 -119872330 + AluSg SINE Alu 2 300 -10 317 75 19 0 chr10 20445016 20445069 -119871696 + (TG)n Simple_repeat Simple_repeat 2 55 0 1644 43 0 0 chr10 20445099 20445286 -119871479 - L1PA6 LINE L1 0 6154 5968 2227 122 3 0 chr10 20446117 20446429 -119870336 + AluSq SINE Alu 1 313 0 1761 169 0 17 chr10 20446832 20447122 -119869643 - AluSx SINE Alu -25 287 3 301 252 208 38 chr10 20447152 20447311 -119869454 + L2 LINE L2 3123 3308 -5 2205 120 0 13 chr10 20447456 20447764 -119869001 + AluSc SINE Alu 1 304 -5 1044 191 71 0 chr10 20447955 20448165 -119868600 - MSTA LTR MaLR 0 428 204 1894 89 0 4 chr10 20449524 20449761 -119867004 - AluSq SINE Alu -77 236 1 272 234 78 0 chr10 20449924 20450001 -119866764 + LTR41 LTR ERVL 686 768 -5 2906 148 2 0 chr10 20450310 20450744 -119866021 + MER1A DNA MER1_type 59 493 -36 442 216 0 0 chr10 20450763 20450851 -119865914 - AluJ/FLAM SINE Alu -213 99 12 656 212 0 0 chr10 20450894 20451007 -119865758 + AluJb SINE Alu 186 298 -14 193 281 75 34 chr10 20451195 20451341 -119865424 + L2 LINE L2 2441 2592 -722 2966 94 3 0 chr10 20451866 20452229 -119864536 - THE1B LTR MaLR 0 364 1 1539 173 17 23 chr10 20453071 20453371 -119863394 - AluJo SINE Alu -10 302 5 365 336 54 14 chr10 20454415 20454638 -119862127 + HAL1 LINE L1 1231 1462 -1045 4186 207 59 9 chr10 20454787 20455602 -119861163 - MER21B LTR ERV1 -3 860 5 3184 195 68 17 chr10 20455604 20456261 -119860504 + MER44D DNA MER2_type 15 705 0 449 330 94 26 chr10 20456657 20456999 -119859766 + L2 LINE L2 2026 2390 -924 207 204 0 0 chr10 20458029 20458073 -119858692 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 1588 109 0 0 chr10 20459460 20459662 -119857103 - AluSc SINE Alu -107 202 1 950 228 29 29 chr10 20459665 20459981 -119856784 - L1M1 LINE L1 -3954 3611 3296 382 174 12 12 chr10 20460016 20460102 -119856663 - L1MCa LINE L1 -4403 2023 1938 * 2352 215 89 19 chr10 20460099 20460727 -119856038 + L1ME1 LINE L1 5334 6005 -161 747 154 51 0 chr10 20461169 20461286 -119855479 + FLAM_A SINE Alu 1 123 -10 30 27 0 0 chr10 20461736 20461773 -119854992 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 20462337 20462360 -119854405 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr10 20462625 20462669 -119854096 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr10 20462994 20463017 -119853748 + AT_rich Low_complexity Low_complexity 1 23 0 2084 120 10 3 chr10 20463438 20463737 -119853028 - AluSx SINE Alu -11 301 1 809 343 32 18 chr10 20463776 20463951 -119852814 + L2 LINE L2 925 1096 -2218 4815 60 0 2 chr10 20463951 20464539 -119852226 - LTR14C LTR ERVK 0 587 1 809 343 32 18 chr10 20464539 20464701 -119852064 + L2 LINE L2 1096 1267 -2047 242 375 91 12 chr10 20464764 20465017 -119851748 - L2 LINE L2 -810 2504 2232 1388 165 131 15 chr10 20465200 20465451 -119851314 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 20465451 20465490 -119851275 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1388 165 131 15 chr10 20465490 20465505 -119851260 + AluJo SINE Alu 286 298 -4 292 293 93 34 chr10 20465651 20465856 -119850909 - L2 LINE L2 -1400 1914 1698 246 105 0 0 chr10 20466006 20466044 -119850721 + (GA)n Simple_repeat Simple_repeat 2 39 0 256 323 189 0 chr10 20466386 20466513 -119850252 - MIR SINE MIR 0 262 112 180 256 0 0 chr10 20466691 20466730 -119850035 - MIR SINE MIR -89 119 81 606 234 136 7 chr10 20466861 20467015 -119849750 - MIR SINE MIR -65 197 24 333 179 30 0 chr10 20468800 20468867 -119847898 - L1MA10 LINE L1 -13 6321 6253 1764 201 27 51 chr10 20469323 20469762 -119847003 - MLT2B3 LTR ERVL -134 396 1 805 274 91 87 chr10 20470073 20470590 -119846175 - L2 LINE L2 -1 3312 2799 1749 144 0 8 chr10 20470590 20470854 -119845911 - AluJo SINE Alu -14 298 37 805 274 91 87 chr10 20470854 20470947 -119845818 - L2 LINE L2 -514 2799 2708 1905 138 3 20 chr10 20470947 20471243 -119845522 - AluSx SINE Alu -21 291 1 805 274 91 87 chr10 20471243 20471467 -119845298 - L2 LINE L2 -605 2708 2472 1196 223 77 21 chr10 20471687 20472014 -119844751 - MLT1C LTR MaLR -120 347 3 1007 234 33 29 chr10 20472107 20472380 -119844385 - LTR40b LTR ERVL -52 410 137 180 0 0 0 chr10 20472678 20472698 -119844067 + (A)n Simple_repeat Simple_repeat 1 20 0 2037 142 0 0 chr10 20472718 20473020 -119843745 + AluSx SINE Alu 1 302 -10 264 333 28 9 chr10 20473070 20473178 -119843587 - MIR SINE MIR -147 115 6 2392 128 16 3 chr10 20473904 20474272 -119842493 + THE1C LTR MaLR 1 373 -2 1058 286 90 25 chr10 20474974 20475152 -119841613 - MLT1G1 LTR MaLR 0 595 430 811 164 0 0 chr10 20475152 20475280 -119841485 - FLAM_C SINE Alu -4 129 2 1058 286 90 25 chr10 20475280 20475610 -119841155 - MLT1G1 LTR MaLR -165 430 10 1680 124 0 4 chr10 20475666 20475908 -119840857 - AluSx SINE Alu -25 287 47 21 0 0 0 chr10 20476197 20476218 -119840547 + AT_rich Low_complexity Low_complexity 1 21 0 2092 160 61 27 chr10 20477127 20477632 -119839133 + MLT2A2 LTR ERVL 8 554 0 1877 152 7 3 chr10 20477975 20478265 -119838500 - AluJb SINE Alu -21 291 1 3188 90 76 0 chr10 20478700 20479187 -119837578 - L1MA3 LINE L1 -8 6297 5774 348 217 130 35 chr10 20479209 20479324 -119837441 + LTR16C LTR ERVL 366 491 0 414 228 88 15 chr10 20480495 20480631 -119836134 - MER104 DNA Tc2 -34 146 1 596 229 0 0 chr10 20481152 20481292 -119835473 - L1MD3 LINE L1 -10 7985 7846 2216 103 7 0 chr10 20481297 20481597 -119835168 + AluSx SINE Alu 5 306 -6 16844 198 36 16 chr10 20481645 20482566 -119834199 + ERVL-D LTR ERVL 176 1077 -4687 225 0 0 0 chr10 20482566 20482591 -119834174 + (TTGG)n Simple_repeat Simple_repeat 1 25 0 16844 198 36 16 chr10 20482591 20484648 -119832117 + ERVL-D LTR ERVL 1077 3314 -2450 1434 183 39 42 chr10 20484648 20484932 -119831833 - AluJb SINE Alu -29 283 1 16844 198 36 16 chr10 20484932 20485685 -119831080 + ERVL-D LTR ERVL 3314 4051 -1713 3872 169 67 11 chr10 20485689 20486422 -119830343 + ERVL-D LTR ERVL 4969 5742 -22 383 119 15 0 chr10 20486459 20486526 -119830239 + ERVL-D LTR ERVL 5681 5748 -16 1203 208 85 100 chr10 20486535 20487006 -119829759 + MLT2D LTR ERVL 1 464 0 3556 154 31 25 chr10 20487007 20487681 -119829084 - MER67C LTR ERV1 -32 678 1 312 273 62 8 chr10 20487685 20487813 -119828952 - L1ME3A LINE L1 -295 5858 5724 386 85 17 0 chr10 20487828 20487887 -119828878 + (TCC)n Simple_repeat Simple_repeat 2 61 0 465 157 0 74 chr10 20487935 20488056 -119828709 + AluSg/x SINE Alu 173 284 -25 1664 103 16 119 chr10 20488316 20488628 -119828137 - AluSx SINE Alu -32 280 1 422 301 91 13 chr10 20488640 20489025 -119827740 - L1ME3A LINE L1 -816 5313 4899 565 286 112 4 chr10 20489438 20489714 -119827051 - L1ME3A LINE L1 -4918 1201 896 43 81 0 0 chr10 20489849 20489948 -119826817 + AT_rich Low_complexity Low_complexity 1 99 0 307 197 39 39 chr10 20489951 20490129 -119826636 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 337 163 26 84 chr10 20490073 20490263 -119826502 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 231 258 166 26 chr10 20490285 20490436 -119826329 - L1ME3A LINE L1 -5339 780 609 3879 48 0 0 chr10 20490700 20491183 -119825582 - L1PA4 LINE L1 0 6155 5673 346 324 32 74 chr10 20491227 20491539 -119825226 - L1ME3A LINE L1 -5818 301 3 1484 112 14 14 chr10 20492794 20493009 -119823756 + AluSg/x SINE Alu 91 305 -7 593 288 27 22 chr10 20493017 20493201 -119823564 - MIR SINE MIR -24 238 54 358 380 21 0 chr10 20493696 20493838 -119822927 - MIR3 SINE MIR -11 197 53 287 286 0 0 chr10 20494905 20494982 -119821783 - L1ME LINE L1 -426 5695 5619 2129 214 123 63 chr10 20495176 20495955 -119820810 + LTR1B LTR ERV1 1 826 0 267 278 72 0 chr10 20495960 20496057 -119820708 - MIR SINE MIR -54 208 105 394 338 122 5 chr10 20496847 20497060 -119819705 - MIR SINE MIR -13 249 12 2066 123 14 0 chr10 20497663 20497955 -119818810 + AluSx SINE Alu 1 296 -16 243 0 0 0 chr10 20498322 20498349 -119818416 + (T)n Simple_repeat Simple_repeat 1 27 0 2587 51 3 3 chr10 20498534 20498850 -119817915 + AluYb8 SINE Alu 1 316 -2 198 0 0 0 chr10 20499158 20499180 -119817585 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 901 108 0 0 chr10 20499180 20499300 -119817465 - AluSc SINE Alu -32 277 158 548 315 94 8 chr10 20499689 20499943 -119816822 + LTR33A LTR ERVL 227 502 -21 2176 188 53 2 chr10 20500051 20500488 -119816277 + MLT1C LTR MaLR 6 464 -3 1888 146 23 3 chr10 20500689 20500991 -119815774 + AluSx SINE Alu 3 310 -2 816 231 108 10 chr10 20501157 20501360 -119815405 - MER58A DNA MER1_type -1 223 1 6502 88 13 2 chr10 20501521 20502469 -119814296 + L1PA10 LINE L1 5210 6164 -4 825 293 64 45 chr10 20502497 20503087 -119813678 - L1ME3A LINE L1 -295 5875 5258 21 57 0 0 chr10 20503394 20503429 -119813336 + AT_rich Low_complexity Low_complexity 1 35 0 214 233 23 12 chr10 20503431 20503517 -119813248 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 1407 298 56 38 chr10 20504496 20505227 -119811538 - L1ME3A LINE L1 -36 6945 6202 330 284 66 65 chr10 20505258 20506813 -119809952 - L1M4b LINE L1 -3892 3065 1359 25 0 0 0 chr10 20507749 20507774 -119808991 + AT_rich Low_complexity Low_complexity 1 25 0 300 303 120 17 chr10 20507882 20508057 -119808708 - MLT1E LTR MaLR -9 558 366 1493 177 44 6 chr10 20508194 20508511 -119808254 - L1MA9 LINE L1 0 6312 5984 337 317 0 4 chr10 20508515 20508598 -119808167 - MLT1E LTR MaLR -203 392 240 292 311 22 73 chr10 20508700 20508902 -119807863 + MLT1H1 LTR MaLR 66 224 -306 262 283 98 11 chr10 20509243 20509335 -119807430 + L2 LINE L2 3163 3262 -10 2038 43 51 0 chr10 20509740 20509996 -119806769 + AluY SINE Alu 43 311 0 296 330 0 43 chr10 20510021 20510115 -119806650 - L2 LINE L2 -15 3298 3209 2777 7 0 0 chr10 20510395 20510695 -119806070 - AluYa5 SINE Alu -11 300 1 559 208 0 0 chr10 20510868 20510964 -119805801 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20510986 20511197 -119805568 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20511409 20511431 -119805334 + AT_rich Low_complexity Low_complexity 1 22 0 383 293 160 13 chr10 20512090 20512246 -119804519 + MIR SINE MIR 19 176 -68 234 150 25 0 chr10 20512252 20512292 -119804473 - MER75 DNA T2_type 0 514 474 298 225 0 50 chr10 20512331 20512411 -119804354 + MIR SINE MIR 187 262 0 229 146 49 0 chr10 20512431 20512472 -119804293 - MLT2B1 LTR ERVL -7 513 471 7240 129 32 10 chr10 20512476 20513742 -119803023 + HSMAR2 DNA Mariner 5 1299 -3 1316 232 77 45 chr10 20513742 20514169 -119802596 - MLT2B1 LTR ERVL -48 472 32 306 317 25 0 chr10 20514621 20514741 -119802024 - MIR SINE MIR 0 262 140 1800 211 44 47 chr10 20515058 20515466 -119801299 - MER74A LTR ERVL -31 527 121 225 222 19 0 chr10 20515585 20515639 -119801126 - MER74B LTR ERVL -518 104 50 22 0 0 0 chr10 20517077 20517099 -119799666 + AT_rich Low_complexity Low_complexity 1 22 0 240 331 39 78 chr10 20517683 20517837 -119798928 + L2 LINE L2 2383 2530 -784 228 241 0 0 chr10 20518743 20518801 -119797964 + CT-rich Low_complexity Low_complexity 3 60 0 1255 213 37 43 chr10 20518907 20519189 -119797576 + MER58B DNA MER1_type 19 300 -2120 2379 89 0 0 chr10 20519189 20519481 -119797284 + AluSc SINE Alu 1 292 -17 1255 213 37 43 chr10 20519481 20519522 -119797243 + MER58B DNA MER1_type 300 340 -1 412 255 136 11 chr10 20519531 20519715 -119797050 + MER3 DNA MER1_type 1 207 -2 248 234 0 0 chr10 20519891 20519938 -119796827 + L2 LINE L2 3213 3259 -13 28 0 0 0 chr10 20520432 20520460 -119796305 + AT_rich Low_complexity Low_complexity 1 28 0 1044 218 116 57 chr10 20520634 20520987 -119795778 + MLT1A2 LTR MaLR 1 374 0 669 285 141 18 chr10 20521749 20522132 -119794633 - MLT1H LTR MaLR -16 533 104 326 231 145 0 chr10 20522220 20522337 -119794428 - L1MC/D LINE L1 -2001 5807 5674 2198 101 0 64 chr10 20522351 20522678 -119794087 - AluSg SINE Alu -4 306 1 239 289 24 12 chr10 20523175 20523258 -119793507 + L2 LINE L2 3227 3310 -3 1686 179 6 28 chr10 20524312 20524631 -119792134 + AluJo SINE Alu 1 312 0 22 56 0 0 chr10 20525155 20525191 -119791574 + GC_rich Low_complexity Low_complexity 1 36 0 462 79 0 0 chr10 20525515 20525578 -119791187 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 2191 75 0 11 chr10 20525580 20525861 -119790904 - AluY SINE Alu -33 278 1 1730 148 11 7 chr10 20526083 20526361 -119790404 - AluJo SINE Alu -25 287 9 294 273 81 30 chr10 20526524 20526623 -119790142 - MER5A DNA MER1_type -77 112 9 478 319 34 43 chr10 20527156 20527363 -119789402 - MIR SINE MIR -44 218 14 320 299 63 32 chr10 20527666 20527887 -119788878 - L1MC4a LINE L1 -1903 5839 5612 1217 148 30 5 chr10 20528184 20528386 -119788379 - AluSg/x SINE Alu 0 312 106 432 127 0 0 chr10 20528386 20528449 -119788316 + AluS SINE Alu 18 80 -233 352 304 42 19 chr10 20528726 20528940 -119787825 - L1MC4a LINE L1 -1109 4971 4753 833 212 54 40 chr10 20528956 20529178 -119787587 - LTR40a LTR ERVL 0 519 295 833 231 57 24 chr10 20529178 20529476 -119787289 - L1MC4a LINE L1 -3161 2919 2612 435 233 78 0 chr10 20529597 20529713 -119787052 - L1MC4a LINE L1 -4633 1628 1504 1247 184 87 3 chr10 20529728 20530027 -119786738 - L1MB2 LINE L1 0 6171 5848 1010 279 50 52 chr10 20530059 20531194 -119785571 - L1ME LINE L1 -4624 1456 332 356 287 52 46 chr10 20531245 20531419 -119785346 - L1ME LINE L1 -5846 224 50 13209 137 20 2 chr10 20531440 20533530 -119783235 - Tigger1 DNA MER2_type -1 2417 291 543 226 0 0 chr10 20533532 20533638 -119783127 + AluJb SINE Alu 192 297 -15 251 226 65 0 chr10 20533638 20533700 -119783065 - Tigger1 DNA MER2_type -2127 291 226 632 162 123 84 chr10 20533703 20533857 -119782908 + AluJo SINE Alu 71 230 -82 209 30 61 0 chr10 20533892 20533925 -119782840 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1378 157 4 8 chr10 20533925 20534155 -119782610 - Tigger1 DNA MER2_type -2189 229 1 2040 111 6 47 chr10 20534529 20534870 -119781895 + L1PB1 LINE L1 5825 6151 0 256 318 0 0 chr10 20535478 20535544 -119781221 + L2 LINE L2 3236 3301 -12 2276 125 0 0 chr10 20536880 20537192 -119779573 - AluSx SINE Alu 0 312 1 954 299 108 47 chr10 20539092 20539677 -119777088 + L2 LINE L2 2372 3083 -230 2678 152 34 13 chr10 20539677 20540151 -119776614 + LTR45B LTR ERV1 3 486 -3 954 299 108 47 chr10 20540151 20540397 -119776368 + L2 LINE L2 3083 3313 0 876 185 24 175 chr10 20540575 20540733 -119776032 - L1ME2 LINE L1 0 6444 6264 4156 149 29 27 chr10 20540733 20541516 -119775249 - LTR1 LTR ERV1 0 785 1 876 185 24 175 chr10 20541516 20541794 -119774971 - L1ME2 LINE L1 -180 6264 6093 2490 54 0 0 chr10 20541794 20542088 -119774677 - AluY SINE Alu -17 294 1 876 185 24 175 chr10 20542088 20542158 -119774607 - L1ME2 LINE L1 -351 6093 6014 344 187 40 0 chr10 20542152 20542227 -119774538 - L1M4 LINE L1 -3400 2746 2669 * 687 234 65 15 chr10 20542213 20543185 -119773580 - L1ME2 LINE L1 -434 6010 4868 363 234 40 16 chr10 20543181 20543305 -119773460 - L1ME2 LINE L1 -3400 3026 2900 * 260 182 117 13 chr10 20543349 20543384 -119773381 - L1ME2 LINE L1 -5543 883 853 486 0 0 0 chr10 20543384 20543438 -119773327 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 260 182 117 13 chr10 20543438 20543479 -119773286 - L1ME2 LINE L1 -5573 853 799 311 140 18 18 chr10 20543480 20543537 -119773228 + LTR45 LTR ERV1 469 525 0 1398 207 17 20 chr10 20543545 20543845 -119772920 - L1ME2 LINE L1 -5628 798 500 804 209 87 6 chr10 20543842 20544014 -119772751 - L1ME2 LINE L1 -6220 206 21 * 841 268 55 99 chr10 20544001 20545103 -119771662 - L1ME LINE L1 -4983 1087 102 3786 175 43 7 chr10 20545119 20545799 -119770966 + MER44D DNA MER2_type 1 704 -1 1110 204 57 92 chr10 20545812 20546180 -119770585 + MLT1C LTR MaLR 113 467 0 423 174 0 0 chr10 20546180 20546266 -119770499 + (CA)n Simple_repeat Simple_repeat 1 86 0 896 218 35 123 chr10 20546814 20547214 -119769551 + MLT1A1 LTR MaLR 1 365 0 187 333 35 0 chr10 20547498 20547585 -119769180 - L2 LINE L2 -234 3079 2990 237 313 40 10 chr10 20547691 20547790 -119768975 - L2 LINE L2 -517 2797 2696 760 123 0 8 chr10 20547790 20547920 -119768845 - L1P LINE L1 -1440 4706 4578 2812 77 0 0 chr10 20547920 20548278 -119768487 + L1PA7 LINE L1 5785 6147 -7 473 165 44 0 chr10 20548296 20548387 -119768378 - L1MA7 LINE L1 -370 5942 5848 1384 141 55 108 chr10 20548388 20548750 -119768015 + L1MA7 LINE L1 5939 6281 -10 1340 280 32 62 chr10 20549325 20549860 -119766905 - LTR40a LTR ERVL 0 519 1 506 317 115 16 chr10 20550846 20551212 -119765553 - L2 LINE L2 0 3313 2912 294 217 117 50 chr10 20551260 20551380 -119765385 - MIR SINE MIR -46 216 89 1617 200 35 17 chr10 20551530 20551875 -119764890 - MLT1A2 LTR MaLR -20 354 4 377 340 151 28 chr10 20552038 20552329 -119764436 + L2 LINE L2 2946 3272 0 291 206 32 0 chr10 20552328 20552391 -119764374 + MIR SINE MIR 86 150 -112 * 2465 40 3 3 chr10 20553098 20553394 -119763371 - AluYa5 SINE Alu -15 296 1 559 208 0 0 chr10 20553567 20553663 -119763102 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20553685 20553896 -119762869 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20554108 20554130 -119762635 + AT_rich Low_complexity Low_complexity 1 22 0 371 301 160 13 chr10 20554789 20554945 -119761820 + MIR SINE MIR 19 176 -68 2206 209 63 70 chr10 20556425 20557080 -119759685 - MER82 DNA MER2_type -1 652 3 2290 78 19 29 chr10 20557583 20557890 -119758875 - AluSx SINE Alu -8 304 1 392 273 144 62 chr10 20558417 20558916 -119757849 + MLT1K LTR MaLR 10 580 -8 1845 172 0 3 chr10 20559144 20559435 -119757330 - AluSx SINE Alu -20 292 3 32 0 0 0 chr10 20559448 20559480 -119757285 + AT_rich Low_complexity Low_complexity 1 32 0 218 238 48 48 chr10 20560541 20560625 -119756140 - MIR3 SINE MIR -4 204 121 2074 129 7 7 chr10 20560698 20561007 -119755758 - AluSx SINE Alu -3 309 1 323 210 10 70 chr10 20561012 20561112 -119755653 - HAL1 LINE L1 -1 2506 2413 691 280 106 0 chr10 20561403 20561667 -119755098 - HAL1 LINE L1 -651 1856 1565 1850 218 23 5 chr10 20561688 20562083 -119754682 - MER65C LTR ERV1 0 461 60 270 325 65 41 chr10 20562083 20562496 -119754269 - HAL1 LINE L1 -1381 1126 704 1134 243 15 53 chr10 20562496 20562837 -119753928 + MLT2C1 LTR ERVL 1 328 -69 396 290 57 105 chr10 20563012 20563346 -119753419 - HAL1 LINE L1 -2167 340 23 1931 112 65 7 chr10 20563387 20563685 -119753080 - AluSx SINE Alu 0 312 1 1705 278 33 21 chr10 20564965 20565537 -119751228 - MLT1H1 LTR MaLR 0 555 1 285 322 91 50 chr10 20565548 20565747 -119751018 + MIR SINE MIR 56 262 0 2308 112 12 0 chr10 20565761 20566083 -119750682 - THE1B LTR MaLR -6 358 33 9493 108 11 39 chr10 20566083 20567528 -119749237 - THE1B-int LTR MaLR -52 1528 124 3051 47 3 3 chr10 20567529 20567911 -119748854 - L1PA5 LINE L1 -3 6151 5770 810 77 0 0 chr10 20567911 20568015 -119748750 - AluY SINE Alu -8 303 200 40 67 0 0 chr10 20568572 20568647 -119748118 + AT_rich Low_complexity Low_complexity 1 75 0 22 88 0 0 chr10 20570010 20570067 -119746698 + AT_rich Low_complexity Low_complexity 1 57 0 827 326 34 17 chr10 20570133 20570489 -119746276 - MLT1K LTR MaLR -85 503 142 184 315 54 117 chr10 20570676 20570762 -119746003 - L2 LINE L2 -7 3265 3175 2625 156 30 6 chr10 20570762 20571230 -119745535 + L1PA16 LINE L1 5687 6165 -1 184 315 54 117 chr10 20571230 20571476 -119745289 - L2 LINE L2 -97 3175 2954 2050 93 4 0 chr10 20572084 20572352 -119744413 + AluSg SINE Alu 41 309 -1 1070 249 114 38 chr10 20572656 20573215 -119743550 - HAL1 LINE L1 -424 2083 1482 241 207 0 17 chr10 20573239 20573297 -119743468 + (TA)n Simple_repeat Simple_repeat 1 57 0 1109 190 89 68 chr10 20573300 20573694 -119743071 - L1MC4 LINE L1 0 8042 7641 818 219 59 83 chr10 20573783 20574291 -119742474 - HAL1 LINE L1 -1144 1363 868 603 303 98 94 chr10 20574294 20574805 -119741960 - LTR33 LTR ERVL -8 513 1 248 317 37 0 chr10 20574805 20574887 -119741878 - HAL1 LINE L1 -1635 872 788 1619 188 14 10 chr10 20575030 20575322 -119741443 - AluJo SINE Alu -14 298 6 320 269 23 85 chr10 20575427 20575557 -119741208 - HAL1 LINE L1 -2295 212 91 771 222 71 10 chr10 20577066 20577264 -119739501 - MER63A DNA MER1_type 0 210 1 1272 146 20 185 chr10 20577270 20577675 -119739090 - MER44D DNA MER2_type -1 608 1 22926 52 3 1 chr10 20578082 20581786 -119734979 - L1PA5 LINE L1 0 6154 2442 470 320 74 22 chr10 20582374 20582643 -119734122 - ERVL LTR ERVL -3048 2716 2434 627 245 112 65 chr10 20582648 20582926 -119733839 + ERVL LTR ERVL 3285 3575 -2189 2973 112 13 7 chr10 20583209 20583663 -119733102 - L1PA10 LINE L1 -1 6167 5711 274 210 61 99 chr10 20583785 20583966 -119732799 - L1MEc LINE L1 -4839 1906 1733 225 226 23 45 chr10 20584006 20584183 -119732582 + (TTTA)n Simple_repeat Simple_repeat 1 173 0 * 329 199 38 15 chr10 20584060 20584191 -119732574 + (TA)n Simple_repeat Simple_repeat 2 135 0 2018 120 17 7 chr10 20584279 20584579 -119732186 - AluSq SINE Alu -10 303 1 239 281 68 55 chr10 20584585 20585040 -119731725 - L1MEc LINE L1 -5026 1528 1068 2074 134 0 3 chr10 20585663 20585961 -119730804 - AluSx SINE Alu -15 297 1 272 198 30 10 chr10 20586509 20586610 -119730155 + CT-rich Low_complexity Low_complexity 3 105 0 260 192 0 154 chr10 20586874 20586978 -119729787 - L2 LINE L2 -1 3271 3184 527 260 35 40 chr10 20587148 20587348 -119729417 - L1MA9 LINE L1 -49 6263 6065 2022 106 7 0 chr10 20587348 20587622 -119729143 - AluSg SINE Alu -11 299 24 1574 220 27 11 chr10 20587642 20588010 -119728755 + L1MA9 LINE L1 5710 6083 -229 260 331 69 15 chr10 20588096 20588226 -119728539 - L2 LINE L2 -178 3094 2958 318 308 0 45 chr10 20588537 20588670 -119728095 - L2 LINE L2 -839 2475 2349 288 53 0 0 chr10 20588695 20588733 -119728032 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 395 122 6 chr10 20589491 20589663 -119727102 + MIR3 SINE MIR 16 207 -1 2844 3 0 0 chr10 20591420 20591726 -119725039 - AluYa5 SINE Alu -5 306 1 212 260 27 27 chr10 20594578 20594651 -119722114 + MIR SINE MIR 75 147 -61 29 47 0 0 chr10 20595496 20595539 -119721226 + AT_rich Low_complexity Low_complexity 1 43 0 26456 98 16 5 chr10 20595660 20600375 -119716390 - L1PA7 LINE L1 0 6154 1395 1879 214 5 22 chr10 20600364 20600775 -119715990 - L1MEc LINE L1 -5128 917 514 * 21 0 0 0 chr10 20600962 20600983 -119715782 + AT_rich Low_complexity Low_complexity 1 21 0 231 337 166 5 chr10 20601433 20601626 -119715139 + L2 LINE L2 2616 2839 -475 257 287 191 0 chr10 20601894 20602009 -119714756 + L2 LINE L2 3134 3270 -2 348 117 17 0 chr10 20602115 20602175 -119714590 - L1MB5 LINE L1 -7 6167 6107 1398 192 27 69 chr10 20602207 20602582 -119714183 - L1MB5 LINE L1 -33 6141 5783 402 143 33 0 chr10 20603169 20603260 -119713505 + (TA)n Simple_repeat Simple_repeat 2 95 0 317 148 45 40 chr10 20603319 20603495 -119713270 + (TA)n Simple_repeat Simple_repeat 1 177 0 456 308 0 0 chr10 20603821 20603941 -119712824 + MER58B DNA MER1_type 222 341 0 180 111 0 0 chr10 20605864 20605891 -119710874 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr10 20606641 20606670 -119710095 + (TA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr10 20606670 20606705 -119710060 + (T)n Simple_repeat Simple_repeat 1 35 0 1657 156 0 53 chr10 20606805 20607087 -119709678 - AluJo SINE Alu -45 267 1 445 268 168 6 chr10 20607093 20607272 -119709493 + L2 LINE L2 2004 2211 -1103 24 32 0 0 chr10 20608238 20608269 -119708496 + AT_rich Low_complexity Low_complexity 1 31 0 756 263 84 5 chr10 20608826 20609092 -119707673 - MER110A LTR ERV1 0 468 213 1973 102 0 7 chr10 20609491 20609776 -119706989 - L1PA8 LINE L1 -3 6169 5887 1877 47 0 0 chr10 20609776 20610009 -119706756 + L1PA8 LINE L1 5653 5885 -287 492 328 110 60 chr10 20610061 20610468 -119706297 - L3 LINE CR1 -166 1411 971 2035 129 17 0 chr10 20610468 20610755 -119706010 + AluSx SINE Alu 6 297 -15 492 328 110 60 chr10 20610755 20610866 -119705899 - L3 LINE CR1 -606 971 867 447 313 95 29 chr10 20610873 20611116 -119705649 + MIR SINE MIR 3 261 -1 613 294 14 32 chr10 20611397 20611615 -119705150 - MER58C DNA MER1_type 0 215 2 2510 55 3 3 chr10 20612073 20612380 -119704385 + AluY SINE Alu 1 307 -4 23 54 0 0 chr10 20612431 20612468 -119704297 + AT_rich Low_complexity Low_complexity 1 37 0 1980 124 0 17 chr10 20613122 20613420 -119703345 + AluSc SINE Alu 1 293 -16 1322 87 19 29 chr10 20613854 20614060 -119702705 - AluY SINE Alu -107 204 1 4309 47 3 2 chr10 20614060 20614719 -119702046 - L1P2 LINE L1 -368 5786 5127 * 5159 69 0 30 chr10 20614717 20615429 -119701336 + L1P2 LINE L1 4437 5127 -1019 888 114 0 0 chr10 20615426 20615557 -119701208 - THE1B-int LTR MaLR -1449 131 1 * 2583 110 6 6 chr10 20615557 20615921 -119700844 - THE1B LTR MaLR 0 364 1 775 274 90 0 chr10 20616183 20616417 -119700348 - MIR SINE MIR 0 262 8 1935 81 25 7 chr10 20616578 20616862 -119699903 + L1MA1 LINE L1 6014 6302 0 21 57 0 0 chr10 20617220 20617255 -119699510 + AT_rich Low_complexity Low_complexity 1 35 0 35528 38 25 2 chr10 20617384 20622835 -119693930 + L1PA3 LINE L1 567 6151 -4 25 0 0 0 chr10 20622835 20622860 -119693905 + AT_rich Low_complexity Low_complexity 1 25 0 288 279 29 0 chr10 20623094 20623198 -119693567 - L1ME LINE L1 -5961 109 3 647 192 47 131 chr10 20623219 20623439 -119693326 - L1MA10 LINE L1 -1 6333 6143 2240 118 6 6 chr10 20623439 20623752 -119693013 + AluSp SINE Alu 1 313 0 647 192 47 131 chr10 20623752 20623828 -119692937 - L1MA10 LINE L1 -191 6143 6062 752 163 20 0 chr10 20623945 20624092 -119692673 - L1MB1 LINE L1 -140 6049 5900 * 1203 183 28 16 chr10 20624089 20624371 -119692394 + L1MB1 LINE L1 5643 5933 -233 25 31 0 0 chr10 20624430 20624462 -119692303 + AT_rich Low_complexity Low_complexity 1 32 0 1584 206 0 0 chr10 20624463 20624750 -119692015 - AluJb SINE Alu -25 287 1 234 0 0 0 chr10 20624989 20625015 -119691750 + (TG)n Simple_repeat Simple_repeat 2 27 0 239 328 58 32 chr10 20625326 20625515 -119691250 - MLT1K LTR MaLR -18 570 377 404 140 11 0 chr10 20626145 20626238 -119690527 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 596 204 0 0 chr10 20626256 20626364 -119690401 + FLAM_C SINE Alu 24 131 -12 430 270 6 0 chr10 20626369 20626547 -119690218 + (TA)n Simple_repeat Simple_repeat 2 180 0 200 211 0 53 chr10 20626657 20626714 -119690051 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 21 36 0 0 chr10 20627546 20627574 -119689191 + AT_rich Low_complexity Low_complexity 1 28 0 225 375 27 43 chr10 20627997 20628105 -119688660 + MIR SINE MIR 45 150 -112 2194 120 0 0 chr10 20628105 20628396 -119688369 + AluSx SINE Alu 5 295 -17 225 375 27 43 chr10 20628396 20628496 -119688269 + MIR SINE MIR 150 250 -12 5435 40 0 0 chr10 20628676 20629359 -119687406 + L1PA5 LINE L1 5494 6176 0 405 226 274 0 chr10 20630575 20630721 -119686044 - MER5A DNA MER1_type -3 186 1 438 216 138 52 chr10 20630778 20631010 -119685755 - MLT1L LTR MaLR -40 575 324 222 118 0 0 chr10 20631215 20631249 -119685516 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 1084 110 51 11 chr10 20631250 20631459 -119685306 - MLT2A2 LTR ERVL 0 453 292 2392 43 43 16 chr10 20632446 20632749 -119684016 - AluY SINE Alu 0 311 1 367 77 0 0 chr10 20632937 20632989 -119683776 - Alu SINE Alu -9 293 242 588 280 16 54 chr10 20633028 20633214 -119683551 + MIR SINE MIR 18 196 -66 2201 83 4 0 chr10 20633265 20633543 -119683222 - AluY SINE Alu -16 295 17 4962 207 49 24 chr10 20633764 20636276 -119680489 - L1MC1 LINE L1 0 6613 4027 1442 208 65 70 chr10 20636298 20636669 -119680096 - L1MC1 LINE L1 -3915 2692 2320 372 59 0 0 chr10 20636669 20636720 -119680045 + (TA)n Simple_repeat Simple_repeat 2 52 0 1442 208 65 70 chr10 20636720 20637543 -119679222 - L1MC1 LINE L1 -4287 2320 1461 862 161 0 0 chr10 20637584 20637714 -119679051 - FLAM_C SINE Alu -3 130 1 2117 108 6 0 chr10 20638495 20638820 -119677945 - pTR5 LTR ERV1 -2046 392 66 281 245 31 20 chr10 20638820 20638918 -119677847 - LTR30 LTR ERV1 -80 642 544 2042 211 43 103 chr10 20638922 20639783 -119676982 - pTR5 LTR ERV1 -417 2021 743 209 367 41 10 chr10 20640098 20640196 -119676569 + L2 LINE L2 3171 3271 -1 30 0 0 0 chr10 20640411 20640441 -119676324 + AT_rich Low_complexity Low_complexity 1 30 0 1971 108 0 7 chr10 20640510 20640779 -119675986 - AluSc SINE Alu -8 301 35 187 263 0 0 chr10 20640885 20640923 -119675842 - L2 LINE L2 -11 3302 3265 21 0 0 0 chr10 20640984 20641005 -119675760 + AT_rich Low_complexity Low_complexity 1 21 0 1470 197 16 68 chr10 20642069 20642450 -119674315 + MLT1A2 LTR MaLR 1 361 -13 301 271 69 7 chr10 20642693 20642837 -119673928 + LTR16C LTR ERVL 330 482 -9 1625 233 7 55 chr10 20643065 20643324 -119673441 + MER57B LTR ERV1 1 230 -204 2208 132 0 0 chr10 20643324 20643635 -119673130 - AluSx SINE Alu -1 311 1 1625 233 7 55 chr10 20643635 20643831 -119672934 + MER57B LTR ERV1 230 434 0 397 335 25 25 chr10 20643835 20644032 -119672733 + MER57B-int LTR ERV1 3 199 -7338 201 292 0 83 chr10 20644118 20644214 -119672551 - MER5A DNA MER1_type -42 147 60 511 174 0 0 chr10 20644996 20645082 -119671683 + AluSc SINE Alu 210 295 -14 302 306 99 0 chr10 20646711 20646822 -119669943 + L2 LINE L2 3138 3259 -13 210 118 0 0 chr10 20648084 20648118 -119668647 + (T)n Simple_repeat Simple_repeat 1 34 0 1031 173 5 0 chr10 20648165 20648350 -119668415 - MER50 LTR ERV1 -23 711 526 2172 143 42 20 chr10 20649096 20649452 -119667313 - THE1B LTR MaLR 0 364 1 185 246 15 0 chr10 20649734 20649799 -119666966 + (CATA)n Simple_repeat Simple_repeat 3 68 0 983 99 35 0 chr10 20650381 20650522 -119666243 + L1PA11 LINE L1 6025 6170 -4 190 107 0 0 chr10 20650721 20650749 -119666016 - MIR SINE MIR -122 140 113 194 288 88 38 chr10 20651282 20651362 -119665403 + L2 LINE L2 3186 3269 -3 312 361 56 35 chr10 20651595 20651739 -119665026 - L2 LINE L2 0 3272 3126 336 288 135 22 chr10 20651821 20652050 -119664715 - MLT1K LTR MaLR -69 519 265 1039 300 58 27 chr10 20652453 20653403 -119663362 + L1MB1 LINE L1 4095 5095 -1062 2206 119 0 13 chr10 20653403 20653706 -119663059 - AluSx SINE Alu -13 299 1 1039 300 58 27 chr10 20653706 20653981 -119662784 + L1MB1 LINE L1 5095 5360 -797 319 280 169 24 chr10 20653990 20654286 -119662479 + L1MB1 LINE L1 5465 5803 -359 3447 183 22 62 chr10 20654732 20655576 -119661189 + L1PA16 LINE L1 5341 6151 -15 2351 113 0 0 chr10 20656120 20656420 -119660345 - AluSx SINE Alu -10 302 3 465 323 108 42 chr10 20656502 20656809 -119659956 + L1MEd LINE L1 59 385 -5734 7868 81 13 5 chr10 20656843 20657996 -119658769 + L1P LINE L1 1192 2353 -3793 1057 116 6 29 chr10 20708078 20708251 -119608514 - MER39 LTR ERV1 0 707 539 1473 198 7 10 chr10 20708310 20708598 -119608167 - MER39 LTR ERV1 -164 543 257 306 197 169 0 chr10 20708572 20708643 -119608122 - MER39 LTR ERV1 -574 133 51 * 1190 228 8 0 chr10 20709735 20709989 -119606776 + L1MB1 LINE L1 5884 6139 -29 1427 149 124 8 chr10 20709989 20710238 -119606527 + AluSg1 SINE Alu 1 278 -31 21 71 0 0 chr10 20710285 20710327 -119606438 + AT_rich Low_complexity Low_complexity 1 42 0 1664 228 8 0 chr10 20711013 20711391 -119605374 + L1 LINE L1 4813 5193 -953 263 324 145 37 chr10 20712497 20712821 -119603944 - L1MC4a LINE L1 -1898 5910 5552 1640 216 65 23 chr10 20713158 20713588 -119603177 - MER39 LTR ERV1 0 707 260 238 297 14 14 chr10 20713595 20713669 -119603096 - MER34C LTR ERV1 -506 79 6 188 182 23 0 chr10 20713798 20713842 -119602923 + CT-rich Low_complexity Low_complexity 2 46 0 235 170 38 0 chr10 20714012 20714065 -119602700 + (TATG)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr10 20714736 20714756 -119602009 + (TA)n Simple_repeat Simple_repeat 2 21 0 34 24 0 0 chr10 20714846 20714887 -119601878 + AT_rich Low_complexity Low_complexity 1 41 0 2366 41 54 0 chr10 20715529 20715824 -119600941 + AluYb8 SINE Alu 1 311 -7 216 0 0 0 chr10 20716195 20716219 -119600546 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 20716771 20716792 -119599973 + AT_rich Low_complexity Low_complexity 1 21 0 4770 175 50 29 chr10 20717137 20718286 -119598479 - L1MA6 LINE L1 0 7719 6551 359 36 55 0 chr10 20718325 20718380 -119598385 - L1MA4A LINE L1 -21 6282 6225 640 154 0 26 chr10 20718381 20718498 -119598267 - L1MA4A LINE L1 -275 6028 5915 * 5411 217 45 12 chr10 20718493 20720150 -119596615 - L1MA6 LINE L1 -2557 5008 3297 1969 234 38 55 chr10 20720177 20720646 -119596119 - L1MA6 LINE L1 -4521 3045 2590 2367 84 0 9 chr10 20720646 20720967 -119595798 - AluYb8 SINE Alu 0 318 1 1969 234 38 55 chr10 20720967 20721201 -119595564 - L1MA6 LINE L1 -4976 2590 2354 1115 153 6 0 chr10 20721902 20722072 -119594693 + AluSg/x SINE Alu 132 302 -8 448 222 115 127 chr10 20722078 20722286 -119594479 - MER66A LTR ERV1 -77 401 295 2394 90 3 0 chr10 20722286 20722598 -119594167 + AluSp SINE Alu 1 313 0 448 222 115 127 chr10 20722598 20722795 -119593970 - MER66A LTR ERV1 -183 295 97 1223 178 89 22 chr10 20723321 20723591 -119593174 + MER2 DNA MER2_type 58 345 0 203 348 62 53 chr10 20723595 20723777 -119592988 - MIR SINE MIR -56 206 27 270 229 0 0 chr10 20724166 20724236 -119592529 + CT-rich Low_complexity Low_complexity 1 70 0 293 329 90 18 chr10 20724923 20725090 -119591675 + MIR SINE MIR 51 229 -33 402 205 259 9 chr10 20725713 20725825 -119590940 + MIR SINE MIR 31 170 -92 1230 278 109 54 chr10 20726660 20727449 -119589316 - L1ME LINE L1 -4485 1776 1032 1715 170 109 0 chr10 20727449 20727779 -119588986 - MER47A DNA MER2_type 0 366 1 1230 278 109 54 chr10 20727779 20728117 -119588648 - L1ME LINE L1 -5229 1032 714 1226 414 23 0 chr10 20728117 20728419 -119588346 - AluSx SINE Alu -3 309 1 1230 278 109 54 chr10 20728419 20728778 -119587987 - L1ME LINE L1 -5547 714 154 307 333 45 18 chr10 20729180 20729291 -119587474 - L2 LINE L2 -20 3252 3139 1009 261 46 15 chr10 20729488 20729817 -119586948 - MER58B DNA MER1_type 0 341 3 2031 136 0 10 chr10 20730188 20730483 -119586282 - AluSx SINE Alu -20 292 1 33 56 0 0 chr10 20730513 20730567 -119586198 + AT_rich Low_complexity Low_complexity 1 54 0 1901 141 60 20 chr10 20730676 20731023 -119585742 + MER46B DNA MER2_type 1 236 0 1891 220 43 77 chr10 20732481 20733126 -119583639 + MLT1E2 LTR MaLR 1 618 -8 363 73 44 0 chr10 20733515 20733583 -119583182 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2689 229 54 25 chr10 20733597 20734435 -119582330 - L1M4 LINE L1 -1006 5638 4777 255 338 21 55 chr10 20735000 20735145 -119581620 + MIR SINE MIR 17 156 -106 241 326 11 0 chr10 20735279 20735368 -119581397 + MIR SINE MIR 172 261 -1 25 31 0 0 chr10 20735375 20735407 -119581358 + AT_rich Low_complexity Low_complexity 1 32 0 493 137 0 49 chr10 20735414 20735516 -119581249 - L1PA11 LINE L1 -2 6172 6076 5049 243 59 15 chr10 20735524 20737028 -119579737 - L1M4 LINE L1 -2192 4452 2831 7198 159 12 1 chr10 20737028 20739060 -119577705 + L1PA11 LINE L1 4130 6174 0 5049 243 59 15 chr10 20739060 20739631 -119577134 - L1M4 LINE L1 -3813 2831 2287 2464 246 127 21 chr10 20739684 20740094 -119576671 - L1M4 LINE L1 -5237 1305 940 1724 184 45 28 chr10 20740094 20740453 -119576312 - MLT1A1 LTR MaLR 0 365 1 2464 246 127 21 chr10 20740453 20740883 -119575882 - L1M4 LINE L1 -5602 940 376 309 350 102 34 chr10 20740983 20741160 -119575605 + L2 LINE L2 2598 2786 -528 266 310 69 100 chr10 20741301 20741453 -119575312 + L2 LINE L2 2985 3125 -147 2153 98 24 0 chr10 20741453 20741740 -119575025 - AluSc SINE Alu -11 298 5 266 310 69 100 chr10 20741740 20741877 -119574888 + L2 LINE L2 3125 3265 -7 21 0 0 0 chr10 20742065 20742086 -119574679 + AT_rich Low_complexity Low_complexity 1 21 0 266 374 122 0 chr10 20742510 20742657 -119574108 - MIR3 SINE MIR -1 207 43 1585 183 44 3 chr10 20743349 20743644 -119573121 - AluJo SINE Alu -5 307 1 362 115 11 35 chr10 20745050 20745137 -119571628 + (TA)n Simple_repeat Simple_repeat 2 86 0 241 176 78 0 chr10 20745139 20745190 -119571575 - L1MC4 LINE L1 -1340 6702 6648 279 293 0 0 chr10 20745190 20745313 -119571452 + (TA)n Simple_repeat Simple_repeat 2 124 0 235 262 71 0 chr10 20745318 20745402 -119571363 - L1MC4 LINE L1 -1339 6703 6614 * 244 241 46 23 chr10 20745331 20745418 -119571347 + L1MC4 LINE L1 6615 6703 -1339 23 33 0 0 chr10 20745418 20745448 -119571317 + AT_rich Low_complexity Low_complexity 1 30 0 310 285 225 7 chr10 20745956 20746107 -119570658 - MIR SINE MIR -6 256 73 196 329 0 76 chr10 20746874 20746953 -119569812 - L3b LINE CR1 -11 1572 1500 477 318 7 0 chr10 20747562 20747710 -119569055 - MER46C DNA MER2_type 0 338 190 204 265 103 0 chr10 20748794 20748862 -119567903 - L2 LINE L2 -13 3300 3226 277 225 28 14 chr10 20748876 20748947 -119567818 - MIR SINE MIR -32 230 159 188 296 197 38 chr10 20749411 20749481 -119567284 - MIR SINE MIR -109 153 95 2066 126 0 0 chr10 20749481 20749782 -119566983 - AluY SINE Alu -10 301 1 188 296 197 38 chr10 20749782 20749843 -119566922 - MIR SINE MIR -167 95 1 * 310 306 93 21 chr10 20749843 20750019 -119566746 - MIR SINE MIR -70 192 3 2422 138 23 9 chr10 20750139 20750574 -119566191 - L1MA4 LINE L1 -7 6293 5853 480 67 0 0 chr10 20751298 20751358 -119565407 - AluS SINE Alu -235 78 19 1299 113 0 21 chr10 20751358 20751594 -119565171 + AluSp SINE Alu 104 335 0 216 0 0 0 chr10 20751593 20751617 -119565148 + (TA)n Simple_repeat Simple_repeat 2 25 0 267 259 0 0 chr10 20752124 20752182 -119564583 - L2 LINE L2 -2 3270 3213 21 36 0 0 chr10 20752412 20752440 -119564325 + AT_rich Low_complexity Low_complexity 1 28 0 4877 106 9 36 chr10 20753190 20753694 -119563071 - L1PA14 LINE L1 0 6161 5684 1803 168 0 22 chr10 20753694 20754010 -119562755 - AluJb SINE Alu -3 309 1 4877 106 9 36 chr10 20754010 20754285 -119562480 - L1PA14 LINE L1 -477 5684 5403 200 167 21 0 chr10 20754539 20754587 -119562178 + GA-rich Low_complexity Low_complexity 2 50 0 616 207 58 46 chr10 20754721 20754788 -119561977 - MER3 DNA MER1_type -33 129 103 2068 108 0 4 chr10 20754788 20755112 -119561653 - AluSc SINE Alu 0 323 1 616 207 58 46 chr10 20755112 20755217 -119561548 - MER3 DNA MER1_type -59 103 1 258 116 0 0 chr10 20755287 20755330 -119561435 + (T)n Simple_repeat Simple_repeat 1 43 0 4765 9 0 0 chr10 20755344 20755883 -119560882 - L1HS LINE L1 -1 6154 5616 * 6651 27 0 0 chr10 20755879 20756682 -119560083 + L1P LINE L1 3134 3936 -2210 33 90 0 0 chr10 20756905 20756994 -119559771 + AT_rich Low_complexity Low_complexity 1 89 0 217 219 0 0 chr10 20757181 20757222 -119559543 + CT-rich Low_complexity Low_complexity 3 43 0 180 125 0 0 chr10 20757605 20757637 -119559128 + (CA)n Simple_repeat Simple_repeat 1 32 0 289 363 94 23 chr10 20758060 20758231 -119558534 + L2 LINE L2 3082 3264 -8 1392 273 18 18 chr10 20758343 20758735 -119558030 - L1M4 LINE L1 -6149 393 2 3190 119 92 0 chr10 20761412 20761943 -119554822 - LTR19B LTR ERV1 0 580 1 1769 106 8 0 chr10 20762303 20762567 -119554198 - L1MA2 LINE L1 0 6304 6039 415 198 104 10 chr10 20763014 20763110 -119553655 + MER81 DNA DNA 10 114 0 186 103 0 0 chr10 20763275 20763304 -119553461 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr10 20763310 20763332 -119553433 + AT_rich Low_complexity Low_complexity 1 22 0 37012 31 10 1 chr10 20763332 20769365 -119547400 - L1HS LINE L1 0 6155 1 392 297 39 28 chr10 20771802 20771984 -119544781 - MIR SINE MIR 0 262 79 3099 140 53 2 chr10 20772343 20772870 -119543895 + MER41C LTR ERV1 1 554 0 2103 191 35 116 chr10 20773423 20774089 -119542676 - LTR9 LTR ERV1 0 612 1 27 22 0 22 chr10 20774496 20774510 -119542255 + AT_rich Low_complexity Low_complexity 1 14 -30 2017 112 17 14 chr10 20774510 20774797 -119541968 - AluSx SINE Alu -14 298 11 27 22 0 22 chr10 20774797 20774827 -119541938 + AT_rich Low_complexity Low_complexity 14 44 0 554 269 117 20 chr10 20775791 20775988 -119540777 - MIR SINE MIR -10 252 37 193 133 67 0 chr10 20775992 20776067 -119540698 + (TA)n Simple_repeat Simple_repeat 2 81 0 29 28 0 0 chr10 20776086 20776122 -119540643 + AT_rich Low_complexity Low_complexity 1 36 0 235 129 45 52 chr10 20776153 20776308 -119540457 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 422 133 66 12 chr10 20776351 20776517 -119540248 + (TA)n Simple_repeat Simple_repeat 1 175 0 24 0 0 0 chr10 20776551 20776575 -119540190 + AT_rich Low_complexity Low_complexity 1 24 0 342 208 60 6 chr10 20776594 20776793 -119539972 + (TA)n Simple_repeat Simple_repeat 1 209 0 272 135 27 36 chr10 20776796 20776907 -119539858 + (TATAA)n Simple_repeat Simple_repeat 1 110 0 2024 128 3 3 chr10 20777597 20777895 -119538870 - AluSx SINE Alu -14 298 1 3707 220 28 39 chr10 20778074 20779044 -119537721 + L1MA9 LINE L1 5316 6274 -38 27 0 0 0 chr10 20779212 20779239 -119537526 + AT_rich Low_complexity Low_complexity 1 27 0 211 200 120 0 chr10 20779369 20779444 -119537321 - MIR SINE MIR -44 218 135 2338 56 20 20 chr10 20779516 20779820 -119536945 - AluY SINE Alu -7 304 1 1972 138 3 0 chr10 20781728 20782038 -119534727 - AluSx SINE Alu 0 311 1 194 0 39 0 chr10 20782694 20782720 -119534045 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 270 0 0 0 chr10 20783005 20783035 -119533730 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 311 0 16 chr10 20784302 20784363 -119532402 - MIR SINE MIR -18 244 185 650 320 43 46 chr10 20784439 20784786 -119531979 - L2 LINE L2 -141 3172 2827 297 257 301 0 chr10 20784802 20784843 -119531922 + MER5B DNA MER1_type 1 28 -150 1751 142 50 3 chr10 20784843 20785160 -119531605 + L1PA16 LINE L1 5832 6163 -3 297 257 301 0 chr10 20785160 20785254 -119531511 + MER5B DNA MER1_type 28 177 -1 * 407 290 145 0 chr10 20785254 20785389 -119531376 - L2 LINE L2 -502 2812 2657 1683 250 57 38 chr10 20785413 20785961 -119530804 - MER90 LTR ERV1 -35 579 22 461 252 8 30 chr10 20785964 20786095 -119530670 - L2 LINE L2 -665 2649 2522 6820 218 28 54 chr10 20786116 20788906 -119527859 + L1MB3 LINE L1 3144 5870 -313 2151 108 3 14 chr10 20788906 20789194 -119527571 + AluSx SINE Alu 1 285 -27 6820 218 28 54 chr10 20789194 20789209 -119527556 + L1MB3 LINE L1 5870 5884 -299 21 0 0 0 chr10 20789212 20789233 -119527532 + AT_rich Low_complexity Low_complexity 1 21 0 1408 193 12 15 chr10 20789233 20789564 -119527201 + L1MB3 LINE L1 5854 6183 0 1414 242 29 27 chr10 20789585 20789961 -119526804 + MLT1E2 LTR MaLR 248 624 -2 452 283 79 14 chr10 20790012 20790302 -119526463 - L1MEc LINE L1 -4805 1591 1283 2109 133 7 0 chr10 20790463 20790765 -119526000 + AluJb SINE Alu 1 304 -8 195 129 0 0 chr10 20791031 20791062 -119525703 + (TA)n Simple_repeat Simple_repeat 1 31 0 643 283 242 11 chr10 20791706 20792070 -119524695 + L2 LINE L2 1501 1948 -1366 1165 167 133 21 chr10 20792078 20792318 -119524447 + Tigger7 DNA MER2_type 1 267 -466 368 281 0 11 chr10 20792323 20792412 -119524353 + Tigger7 DNA MER2_type 2499 2586 -1 1253 257 126 16 chr10 20792415 20792867 -119523898 + L2 LINE L2 1961 2462 -852 2425 294 195 45 chr10 20792868 20794121 -119522644 + L2 LINE L2 1125 2188 -1125 1832 159 55 25 chr10 20794121 20794485 -119522280 - THE1C LTR MaLR 0 375 1 2425 294 195 45 chr10 20794485 20795126 -119521639 + L2 LINE L2 2188 3300 -13 185 0 40 0 chr10 20795127 20795152 -119521613 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 554 64 51 0 chr10 20795219 20795297 -119521468 - AluSg/x SINE Alu -11 298 217 1885 268 19 29 chr10 20795328 20795851 -119520914 - LTR40a LTR ERVL -1 518 1 24 0 0 0 chr10 20796052 20796076 -119520689 + AT_rich Low_complexity Low_complexity 1 24 0 196 315 75 95 chr10 20796577 20796708 -119520057 + MIR SINE MIR 9 141 -121 2078 136 0 0 chr10 20796708 20797033 -119519732 + AluSx SINE Alu 1 325 0 1410 182 37 14 chr10 20797040 20797337 -119519428 + AluJb SINE Alu 1 304 -8 196 315 75 95 chr10 20797337 20797395 -119519370 + MIR SINE MIR 147 204 -58 225 0 0 0 chr10 20797836 20797861 -119518904 + (T)n Simple_repeat Simple_repeat 1 25 0 238 224 0 0 chr10 20798339 20798388 -119518377 + (TA)n Simple_repeat Simple_repeat 1 49 0 2213 101 0 3 chr10 20799015 20799303 -119517462 - AluSc SINE Alu -22 287 1 449 314 83 18 chr10 20800027 20800260 -119516505 + MIR SINE MIR 17 262 0 227 213 21 0 chr10 20800279 20800326 -119516439 + CT-rich Low_complexity Low_complexity 1 48 0 348 285 64 64 chr10 20802616 20802788 -119513977 - L2 LINE L2 -26 3287 3116 76 51 0 0 chr10 20803217 20803335 -119513430 + AT_rich Low_complexity Low_complexity 1 118 0 1734 167 25 48 chr10 20804565 20804684 -119512081 - MER44D DNA MER2_type -1884 603 483 2077 120 3 7 chr10 20804684 20804992 -119511773 - AluSx SINE Alu -5 307 1 1734 167 25 48 chr10 20804992 20805355 -119511410 - MER44D DNA MER2_type -2004 483 1 280 344 23 23 chr10 20805798 20805926 -119510839 + MER5A DNA MER1_type 34 161 -28 575 242 34 62 chr10 20805938 20806116 -119510649 + MER5B DNA MER1_type 6 178 0 22 0 0 0 chr10 20807239 20807261 -119509504 + AT_rich Low_complexity Low_complexity 1 22 0 219 329 71 41 chr10 20807421 20807627 -119509138 - MIR SINE MIR -30 232 27 1855 110 41 7 chr10 20808613 20808905 -119507860 + AluSx SINE Alu 11 312 0 2246 229 59 55 chr10 20809349 20810373 -119506392 - L1ME1 LINE L1 -92 6143 5125 1344 126 0 0 chr10 20810538 20810721 -119506044 - AluSg SINE Alu -127 183 1 2404 258 71 26 chr10 20810753 20811638 -119505127 - L1ME1 LINE L1 -5436 960 36 7329 139 7 2 chr10 20811772 20812935 -119503830 - HSMAR2 DNA Mariner -4 1298 70 219 124 105 19 chr10 20812937 20813042 -119503723 + (TATAA)n Simple_repeat Simple_repeat 2 115 0 453 146 52 21 chr10 20813045 20813141 -119503624 - HSMAR2 DNA Mariner -1202 100 2 256 315 23 23 chr10 20813275 20813297 -119503468 + CT-rich Low_complexity Low_complexity 2 23 -108 2170 134 3 0 chr10 20813297 20813604 -119503161 - AluSg SINE Alu -2 308 1 256 315 23 23 chr10 20813604 20813711 -119503054 + CT-rich Low_complexity Low_complexity 22 131 0 1933 253 28 74 chr10 20813896 20814206 -119502559 - L1M2 LINE L1 -4686 2482 2159 2889 9 0 9 chr10 20814206 20814527 -119502238 - AluYb8 SINE Alu 0 318 1 1933 253 28 74 chr10 20814527 20815061 -119501704 - L1M2 LINE L1 -5009 2159 1696 1741 340 8 10 chr10 20815438 20816036 -119500729 - L1M2 LINE L1 -6569 599 3 330 385 117 15 chr10 20817150 20817612 -119499153 - L2 LINE L2 -2513 801 293 22 0 0 0 chr10 20817960 20817982 -119498783 + AT_rich Low_complexity Low_complexity 1 22 0 195 186 0 0 chr10 20819245 20819288 -119497477 + CT-rich Low_complexity Low_complexity 3 45 0 236 344 11 11 chr10 20819295 20819388 -119497377 + C-rich Low_complexity Low_complexity 2 94 0 233 253 0 12 chr10 20819388 20819471 -119497294 + CT-rich Low_complexity Low_complexity 2 83 0 465 34 0 0 chr10 20819603 20819662 -119497103 + (CA)n Simple_repeat Simple_repeat 2 60 0 1610 134 71 0 chr10 20820202 20820441 -119496324 + AluSx SINE Alu 38 293 -19 1011 235 4 28 chr10 20820470 20820520 -119496245 + MER74A LTR ERVL 194 244 -314 1776 207 24 3 chr10 20820520 20820902 -119495863 - MLT1B LTR MaLR 0 390 1 1011 235 4 28 chr10 20820902 20821098 -119495667 + MER74A LTR ERVL 244 434 -124 594 112 10 10 chr10 20821140 20821238 -119495527 + L1PA13 LINE L1 6053 6150 -13 1784 119 0 0 chr10 20821465 20821709 -119495056 + AluSg SINE Alu 60 303 -7 2351 95 0 19 chr10 20822617 20822932 -119493833 + AluSx SINE Alu 1 309 -3 606 295 48 51 chr10 20823679 20824015 -119492750 - L2 LINE L2 0 3313 2979 2879 141 50 28 chr10 20824021 20824612 -119492153 - MER4B LTR ERV1 0 779 9 2386 240 99 180 chr10 20824676 20825088 -119491677 - L2 LINE L2 -518 2796 2352 5181 84 13 0 chr10 20825088 20825769 -119490996 - LTR8 LTR ERV1 -1 690 1 2386 240 99 180 chr10 20825769 20826265 -119490500 - L2 LINE L2 -962 2352 1818 1489 153 57 82 chr10 20826265 20826554 -119490211 + L1MB5 LINE L1 5817 6112 -62 2174 120 3 0 chr10 20826554 20826854 -119489911 - AluSq SINE Alu -12 301 1 2202 101 14 0 chr10 20826854 20827150 -119489615 - AluSx SINE Alu -12 300 1 1489 153 57 82 chr10 20827150 20827226 -119489539 + L1MB5 LINE L1 6110 6174 0 2386 240 99 180 chr10 20827226 20828544 -119488221 - L2 LINE L2 -1496 1818 418 2095 106 0 33 chr10 20828544 20828846 -119487919 - AluSx SINE Alu -20 292 1 2386 240 99 180 chr10 20828846 20828906 -119487859 - L2 LINE L2 -2896 418 355 222 37 0 0 chr10 20829109 20829136 -119487629 + (TG)n Simple_repeat Simple_repeat 1 27 0 1663 177 3 43 chr10 20829736 20830035 -119486730 + AluJo SINE Alu 3 289 -23 2262 129 0 0 chr10 20830746 20831056 -119485709 - AluSx SINE Alu -2 310 1 1101 128 0 0 chr10 20831080 20831260 -119485505 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 219 263 0 0 chr10 20831308 20831365 -119485400 + T-rich Low_complexity Low_complexity 1 57 0 30 0 0 0 chr10 20832508 20832538 -119484227 + AT_rich Low_complexity Low_complexity 1 30 0 3239 75 20 2 chr10 20832573 20833015 -119483750 - L1PA10 LINE L1 -11 6157 5708 989 236 62 22 chr10 20833063 20833338 -119483427 - L1MCb LINE L1 -5047 998 713 2661 231 147 14 chr10 20834794 20835534 -119481231 - MER21B LTR ERV1 -19 844 6 259 220 29 18 chr10 20835538 20835827 -119480938 + (TA)n Simple_repeat Simple_repeat 1 292 0 291 162 30 0 chr10 20836471 20836570 -119480195 + (TATG)n Simple_repeat Simple_repeat 3 104 0 24 0 0 0 chr10 20837609 20837633 -119479132 + AT_rich Low_complexity Low_complexity 1 24 0 1418 118 0 14 chr10 20838740 20838951 -119477814 - AluSg/x SINE Alu -6 306 99 440 66 0 165 chr10 20840240 20840331 -119476434 + MADE1 DNA Mariner 1 76 -4 21 0 0 0 chr10 20840864 20840885 -119475880 + AT_rich Low_complexity Low_complexity 1 21 0 1911 154 7 3 chr10 20840971 20841264 -119475501 - AluSx SINE Alu -18 294 1 931 185 46 0 chr10 20841372 20841567 -119475198 + MER3 DNA MER1_type 2 205 -4 402 50 33 0 chr10 20842151 20842211 -119474554 - L1PA6 LINE L1 0 6154 6093 2200 109 0 13 chr10 20843061 20843373 -119473392 + AluSg SINE Alu 1 308 -2 2204 122 3 0 chr10 20844160 20844455 -119472310 - AluSx SINE Alu -14 298 3 479 238 182 0 chr10 20845481 20845624 -119471141 + MER5A DNA MER1_type 21 189 0 23 0 0 0 chr10 20845771 20845794 -119470971 + AT_rich Low_complexity Low_complexity 1 23 0 2938 169 44 11 chr10 20846171 20846264 -119470501 + L1MA9 LINE L1 5676 5765 -547 393 22 0 0 chr10 20846264 20846310 -119470455 + (TG)n Simple_repeat Simple_repeat 2 47 0 2938 169 44 11 chr10 20846310 20846833 -119469932 + L1MA9 LINE L1 5765 6312 0 1888 147 32 0 chr10 20846958 20847299 -119469466 + L1MB3 LINE L1 5828 6179 -4 2626 52 0 0 chr10 20847628 20847935 -119468830 + AluY SINE Alu 1 307 -4 323 292 25 42 chr10 20849241 20849361 -119467404 + MER94 DNA DNA 17 134 0 427 214 141 32 chr10 20849943 20850101 -119466664 + MER8 DNA MER2_type 50 345 0 358 326 144 5 chr10 20850434 20850621 -119466144 + MIR SINE MIR 22 234 -28 1959 146 0 32 chr10 20851099 20851415 -119465350 + AluSx SINE Alu 1 306 -6 215 345 35 0 chr10 20852446 20852533 -119464232 - L3b LINE CR1 -275 1308 1219 740 165 16 8 chr10 20852767 20852894 -119463871 - FLAM_C SINE Alu -14 129 2 367 295 93 0 chr10 20854083 20854212 -119462553 + MIR SINE MIR 115 255 -7 198 0 0 0 chr10 20854526 20854548 -119462217 + (TA)n Simple_repeat Simple_repeat 2 23 0 525 58 0 0 chr10 20854799 20854868 -119461897 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1262 140 0 39 chr10 20854870 20855077 -119461688 - AluSg/x SINE Alu -29 283 85 1732 239 27 23 chr10 20855415 20855933 -119460832 - L1ME1 LINE L1 -2 6164 5645 216 0 0 0 chr10 20855954 20855978 -119460787 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1011 294 21 50 chr10 20855978 20856397 -119460368 - L1MEc LINE L1 -5834 562 156 350 356 97 36 chr10 20856522 20856912 -119459853 - L1MC/D LINE L1 -1985 5823 5410 849 274 109 33 chr10 20856939 20857606 -119459159 - L1MC/D LINE L1 -1634 4512 3795 638 332 68 57 chr10 20858044 20859171 -119457594 - L1M4 LINE L1 -1461 4685 3540 1472 186 100 4 chr10 20859171 20859451 -119457314 + AluJo SINE Alu 1 307 -5 638 332 68 57 chr10 20859451 20859587 -119457178 - L1M4 LINE L1 -2606 3540 3407 269 291 146 0 chr10 20861363 20861473 -119455292 + MIR SINE MIR 8 133 -129 184 283 87 0 chr10 20861572 20861618 -119455147 + L2 LINE L2 3210 3259 -13 189 147 0 0 chr10 20862022 20862056 -119454709 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 2001 88 92 3 chr10 20862998 20863282 -119453483 - AluY SINE Alu 0 311 3 27 29 0 0 chr10 20964267 20964301 -119352464 + AT_rich Low_complexity Low_complexity 1 34 0 269 319 74 15 chr10 20964358 20964493 -119352272 - MIR SINE MIR -29 233 91 233 210 73 145 chr10 20964615 20964739 -119352026 - MER117 DNA MER1_type -1 196 82 2053 115 45 3 chr10 20964750 20965038 -119351727 + AluSx SINE Alu 1 300 -12 294 329 58 7 chr10 20965775 20965912 -119350853 + MIR SINE MIR 12 155 -107 25 0 0 0 chr10 20965985 20966010 -119350755 + AT_rich Low_complexity Low_complexity 1 25 0 275 270 56 0 chr10 20966774 20966863 -119349902 - MIR SINE MIR -16 246 153 761 309 49 10 chr10 20967082 20967389 -119349376 + MER46C DNA MER2_type 20 338 0 312 272 25 12 chr10 20967389 20967470 -119349295 - MIR SINE MIR -105 157 76 1885 142 22 0 chr10 20967517 20967816 -119348949 + AluSx SINE Alu 1 305 0 2262 93 10 16 chr10 20968341 20968651 -119348114 - AluY SINE Alu -3 308 1 1184 102 0 0 chr10 20969237 20969403 -119347362 - L1PA10 LINE L1 -4 6164 5999 428 331 141 0 chr10 20970741 20971004 -119345761 - L2 LINE L2 0 3313 3014 349 320 155 36 chr10 20971270 20971689 -119345076 - L2 LINE L2 -18 3295 2827 255 61 0 0 chr10 20972108 20972141 -119344624 + (CA)n Simple_repeat Simple_repeat 2 34 0 30 45 0 0 chr10 20972676 20972720 -119344045 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr10 20972784 20972828 -119343937 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr10 20972869 20972901 -119343864 + AT_rich Low_complexity Low_complexity 1 32 0 42 36 0 0 chr10 20973335 20973391 -119343374 + AT_rich Low_complexity Low_complexity 1 56 0 5990 187 100 70 chr10 20973451 20974009 -119342756 - L1MC3 LINE L1 -18 7767 7228 284 267 0 0 chr10 20974009 20974084 -119342681 - MLT1F1 LTR MaLR -458 109 35 5990 187 100 70 chr10 20974084 20975245 -119341520 - L1MC3 LINE L1 -557 7228 5919 248 234 39 0 chr10 20975465 20975542 -119341223 + T-rich Low_complexity Low_complexity 3 82 0 23 0 0 0 chr10 20975736 20975759 -119341006 + AT_rich Low_complexity Low_complexity 1 23 0 2498 179 37 76 chr10 20976291 20976961 -119339804 - L1MB3 LINE L1 -115 6068 5425 47 33 0 0 chr10 20977336 20977397 -119339368 + AT_rich Low_complexity Low_complexity 1 61 0 1444 189 7 30 chr10 20977482 20977779 -119338986 + AluJo SINE Alu 1 290 -22 38701 73 16 2 chr10 20978579 20984575 -119332190 - L1PA5 LINE L1 -2 6152 79 1127 156 7 0 chr10 20985321 20990541 -119326224 + ALR/Alpha Satellite centromeric 1 5252 -31 34 108 0 0 chr10 20990982 20991121 -119325644 + AT_rich Low_complexity Low_complexity 1 139 0 1823 107 0 0 chr10 20991445 20991688 -119325077 - AluSc SINE Alu -10 299 57 2351 151 32 53 chr10 20991836 20991978 -119324787 - MER65C LTR ERV1 0 461 317 815 147 7 0 chr10 20991978 20992114 -119324651 + L1PA15 LINE L1 6016 6152 -13 2351 151 32 53 chr10 20992114 20992442 -119324323 - MER65C LTR ERV1 -144 317 1 1966 155 5 47 chr10 20992933 20993313 -119323452 - MLT1A1 LTR MaLR 0 365 2 721 264 83 25 chr10 20995097 20995339 -119321426 + MIR SINE MIR 7 262 0 1046 214 39 18 chr10 20995525 20995806 -119320959 + L1MB8 LINE L1 5890 6176 -2 1199 144 0 83 chr10 20995816 20995864 -119320901 + AluJo SINE Alu 83 133 -179 1965 139 3 3 chr10 20995864 20996159 -119320606 + AluSx SINE Alu 1 295 -17 1199 144 0 83 chr10 20996159 20996339 -119320426 + AluJo SINE Alu 133 292 -20 376 84 14 14 chr10 20996675 20996746 -119320019 + (TA)n Simple_repeat Simple_repeat 2 72 0 310 186 17 0 chr10 20996755 20996814 -119319951 - Tigger5 DNA MER2_type 0 2323 2264 242 191 0 0 chr10 20996834 20996876 -119319889 - Tigger5 DNA MER2_type -2268 55 14 350 219 14 14 chr10 20996877 20996950 -119319815 - Tigger5 DNA MER2_type 0 2323 2251 290 273 0 0 chr10 20996919 20996974 -119319791 - Tigger5 DNA MER2_type -2268 55 1 * 354 45 0 0 chr10 20996976 20997020 -119319745 + (CA)n Simple_repeat Simple_repeat 1 44 0 632 320 17 22 chr10 20997677 20997908 -119318857 + MIR SINE MIR 17 246 -16 1158 107 0 0 chr10 20999020 20999209 -119317556 - AluSc SINE Alu 0 320 132 2345 191 63 2 chr10 20999557 21000002 -119316763 - MER70A LTR ERVL 0 472 1 21 36 0 0 chr10 21000134 21000162 -119316603 + AT_rich Low_complexity Low_complexity 1 28 0 242 311 27 0 chr10 21000921 21000995 -119315770 + MLT1I LTR MaLR 115 190 -219 204 125 0 0 chr10 21001162 21001194 -119315571 + (TA)n Simple_repeat Simple_repeat 1 32 0 47 53 0 0 chr10 21002022 21002097 -119314668 + AT_rich Low_complexity Low_complexity 1 75 0 1529 163 31 16 chr10 21003840 21004098 -119312667 + AluJb SINE Alu 6 267 -45 1872 237 59 7 chr10 21004433 21004872 -119311893 + MER74A LTR ERVL 97 558 0 29 0 0 0 chr10 21005414 21005443 -119311322 + AT_rich Low_complexity Low_complexity 1 29 0 6236 157 20 19 chr10 21005443 21005823 -119310942 - L1PB1 LINE L1 -1 6150 5772 342 0 0 0 chr10 21005823 21005861 -119310904 + (TG)n Simple_repeat Simple_repeat 2 39 0 6236 157 20 19 chr10 21005861 21007633 -119309132 - L1PB1 LINE L1 -379 5772 3999 1511 201 17 10 chr10 21007810 21008098 -119308667 - AluJb SINE Alu -22 290 1 372 279 85 78 chr10 21008217 21008711 -119308054 - L1M4 LINE L1 -653 5521 5015 1320 200 3 40 chr10 21008720 21008924 -119307841 - MLT1B LTR MaLR -4 386 195 1608 159 125 6 chr10 21008924 21009244 -119307521 - MER46B DNA MER2_type -3 233 1 1320 200 3 40 chr10 21009244 21009339 -119307426 - MLT1B LTR MaLR -195 195 98 2260 79 0 4 chr10 21009342 21009622 -119307143 + AluY SINE Alu 1 279 -32 459 45 0 0 chr10 21009622 21009688 -119307077 + AluY SINE Alu 241 306 -4 545 232 7 53 chr10 21009725 21009876 -119306889 - MLT1B LTR MaLR -246 144 1 28 0 0 0 chr10 21010043 21010071 -119306694 + AT_rich Low_complexity Low_complexity 1 28 0 2137 130 0 0 chr10 21010071 21010363 -119306402 - AluSx SINE Alu -20 292 1 29 0 0 0 chr10 21011204 21011233 -119305532 + AT_rich Low_complexity Low_complexity 1 29 0 525 259 35 24 chr10 21011258 21011428 -119305337 + MER5B DNA MER1_type 3 174 -4 471 243 78 66 chr10 21011792 21012035 -119304730 - Charlie2 DNA MER1_type -634 2228 1983 9212 192 43 19 chr10 21012045 21015188 -119301577 - L1MA10 LINE L1 -2 6332 3114 189 220 0 51 chr10 21015383 21015442 -119301323 + MIR SINE MIR 175 230 -32 188 289 0 0 chr10 21015409 21015461 -119301304 + L2 LINE L2 3202 3253 -19 * 4677 164 23 20 chr10 21015491 21016374 -119300391 - L1MB3 LINE L1 -7 6176 5292 22 88 0 0 chr10 21016803 21016860 -119299905 + AT_rich Low_complexity Low_complexity 1 57 0 368 330 64 12 chr10 21017092 21017265 -119299500 - MIR SINE MIR -15 247 66 2458 56 0 0 chr10 21017314 21017601 -119299164 + AluY SINE Alu 1 287 -24 557 366 98 0 chr10 21018558 21018804 -119297961 + MER115 DNA AcHobo 57 326 -367 281 26 0 26 chr10 21019638 21019677 -119297088 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2425 199 20 66 chr10 21019696 21020299 -119296466 - LTR9 LTR ERV1 0 612 38 313 289 56 38 chr10 21021611 21021809 -119294956 + MIR SINE MIR 15 255 -7 576 244 154 56 chr10 21021849 21022173 -119294592 - MLT1J2 LTR MaLR -23 427 72 194 271 140 56 chr10 21022460 21022567 -119294198 - L2 LINE L2 -1030 2284 2169 197 189 151 19 chr10 21023388 21023441 -119293324 + MER5A DNA MER1_type 120 179 -10 5039 184 117 9 chr10 21024591 21024833 -119291932 + L1PA16 LINE L1 4124 4339 -1827 402 21 0 0 chr10 21024833 21024880 -119291885 + (CA)n Simple_repeat Simple_repeat 2 48 0 5039 184 117 9 chr10 21024880 21026465 -119290300 + L1PA16 LINE L1 4339 6157 -9 3981 146 3 13 chr10 21026848 21027521 -119289244 + L1PB3 LINE L1 5488 6153 -1 2411 54 0 7 chr10 21027542 21027840 -119288925 + AluY SINE Alu 1 296 -15 356 269 91 88 chr10 21027856 21028164 -119288601 + L1ME4a LINE L1 5546 5854 -267 26 30 0 0 chr10 21029689 21029722 -119287043 + AT_rich Low_complexity Low_complexity 1 33 0 202 275 165 0 chr10 21033492 21033583 -119283182 - L2 LINE L2 -778 2536 2431 21 71 0 0 chr10 21034344 21034386 -119282379 + AT_rich Low_complexity Low_complexity 1 42 0 536 307 119 59 chr10 21034500 21034989 -119281776 - MLT1H1 LTR MaLR 0 555 38 30 27 0 0 chr10 21035132 21035169 -119281596 + AT_rich Low_complexity Low_complexity 1 37 0 1478 188 9 32 chr10 21035171 21035512 -119281253 - L1MB3 LINE L1 -10 6173 5841 2135 95 7 20 chr10 21035708 21036013 -119280752 + AluSg SINE Alu 1 301 -9 6593 213 31 18 chr10 21036165 21037159 -119279606 + L1PA12 LINE L1 2117 3097 -4487 1998 158 0 0 chr10 21037159 21037457 -119279308 - AluSx SINE Alu -14 298 1 6593 213 31 18 chr10 21037457 21038809 -119277956 + L1PA12 LINE L1 3097 4497 -3087 1345 206 39 52 chr10 21041527 21041857 -119274908 + MLT2D LTR ERVL 89 414 0 23 0 0 0 chr10 21041971 21041994 -119274771 + AT_rich Low_complexity Low_complexity 1 23 0 1572 205 43 0 chr10 21042058 21042385 -119274380 - L1 LINE L1 -2261 3885 3545 367 286 53 21 chr10 21042492 21042740 -119274025 + L1 LINE L1 4806 5059 -1087 688 252 60 90 chr10 21043000 21043365 -119273400 - L2 LINE L2 -1 3312 2959 590 243 47 24 chr10 21043387 21043556 -119273209 - MER20 DNA MER1_type -1 218 46 1632 132 20 0 chr10 21043930 21044180 -119272585 + AluJb SINE Alu 1 255 -57 327 49 0 0 chr10 21044193 21044234 -119272531 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 28 99 0 0 chr10 21044365 21044456 -119272309 + AT_rich Low_complexity Low_complexity 1 91 0 24 91 0 0 chr10 21044645 21044711 -119272054 + AT_rich Low_complexity Low_complexity 1 66 0 214 296 0 0 chr10 21046023 21046077 -119270688 - L2 LINE L2 -5 3267 3214 239 265 140 29 chr10 21046334 21046470 -119270295 - MIR SINE MIR -92 170 20 216 224 0 0 chr10 21046749 21046816 -119269949 + (CA)n Simple_repeat Simple_repeat 2 68 0 2878 6 0 0 chr10 21046845 21047162 -119269603 - AluYb8 SINE Alu -1 317 1 237 266 0 0 chr10 21047224 21047318 -119269447 + GA-rich Low_complexity Low_complexity 3 96 0 1702 171 60 37 chr10 21047429 21047810 -119268955 + MLT1B LTR MaLR 1 390 0 864 226 6 6 chr10 21048086 21048263 -119268502 - MER5B DNA MER1_type -1 177 1 319 318 70 16 chr10 21048410 21048539 -119268226 + HAL1 LINE L1 818 953 -1554 259 259 12 0 chr10 21048764 21048845 -119267920 + (TA)n Simple_repeat Simple_repeat 2 83 0 575 246 47 47 chr10 21048907 21049037 -119267728 + L1MC5 LINE L1 7701 7833 -128 2011 180 56 15 chr10 21049037 21049448 -119267317 - MSTA LTR MaLR 0 428 1 575 246 47 47 chr10 21049448 21049549 -119267216 + L1MC5 LINE L1 7832 7932 -29 467 243 62 66 chr10 21050068 21050327 -119266438 - L2 LINE L2 0 3313 3056 190 354 10 21 chr10 21050483 21050579 -119266186 - MIR SINE MIR -8 254 160 1340 197 62 0 chr10 21050687 21050992 -119265773 + MER33 DNA MER1_type 1 324 0 501 304 108 27 chr10 21051315 21051687 -119265078 - MER93a LTR ERV1 0 402 1 1669 315 43 38 chr10 21051688 21051987 -119264778 - MER93a-int LTR ERV1 -395 7142 6846 6185 113 29 18 chr10 21051987 21052945 -119263820 - LTR5 LTR ERVK 0 969 1 1669 315 43 38 chr10 21052945 21053559 -119263206 - MER93a-int LTR ERV1 -691 6846 6225 1078 233 32 109 chr10 21054023 21054427 -119262338 - MER93a-int LTR ERV1 -1341 6196 5824 3351 229 50 77 chr10 21054754 21055267 -119261498 - MER93a-int LTR ERV1 -1497 3439 2913 1933 175 62 52 chr10 21055267 21055638 -119261127 + MSTB LTR MaLR 1 378 -48 2376 76 0 0 chr10 21055638 21055939 -119260826 + AluY SINE Alu 1 301 -10 1933 175 62 52 chr10 21055939 21055989 -119260776 + MSTB LTR MaLR 378 426 0 3351 229 50 77 chr10 21055989 21057561 -119259204 - MER93a-int LTR ERV1 -2023 2913 1916 276 186 0 0 chr10 21057624 21057667 -119259098 - MER34 LTR ERV1 0 542 500 398 179 49 81 chr10 21057675 21057726 -119259039 - MER34 LTR ERV1 -288 254 203 2290 84 0 34 chr10 21057726 21058048 -119258717 - AluY SINE Alu 0 311 1 398 179 49 81 chr10 21058048 21058119 -119258646 - MER34 LTR ERV1 -339 203 136 294 273 40 0 chr10 21058121 21058220 -119258545 - MER93a-int LTR ERV1 -2477 2394 2292 1136 226 65 42 chr10 21058242 21058675 -119258090 - MER93a-int LTR ERV1 -3470 1466 1024 519 196 5 38 chr10 21058795 21058979 -119257786 + CT-rich Low_complexity Low_complexity 3 180 0 401 291 0 28 chr10 21059056 21059197 -119257568 - MER34C LTR ERV1 -155 430 294 594 266 107 52 chr10 21059850 21060083 -119256682 - MER93a-int LTR ERV1 -7289 248 3 577 287 71 45 chr10 21060090 21060470 -119256295 - MER93a LTR ERV1 -12 390 1 1275 203 40 47 chr10 21061662 21061963 -119254802 + AluJb SINE Alu 3 301 -11 367 329 129 6 chr10 21062250 21062420 -119254345 - MIR SINE MIR -71 191 1 21 0 0 0 chr10 21063632 21063653 -119253112 + AT_rich Low_complexity Low_complexity 1 21 0 1133 201 7 26 chr10 21064471 21064744 -119252021 - L1MCb LINE L1 -5077 968 701 584 283 12 12 chr10 21064848 21065021 -119251744 - MIR SINE MIR -78 184 12 766 231 61 38 chr10 21065235 21065447 -119251318 - MIR SINE MIR -44 218 2 2066 99 35 3 chr10 21066375 21066659 -119250106 + AluSx SINE Alu 1 293 -19 2044 118 0 43 chr10 21067051 21067395 -119249370 - AluSp SINE Alu 0 313 1 22 35 0 0 chr10 21068537 21068566 -119248199 + AT_rich Low_complexity Low_complexity 1 29 0 1058 225 46 26 chr10 21069011 21069318 -119247447 + MER119 DNA MER1_type 157 469 -114 2240 105 0 0 chr10 21070493 21070798 -119245967 + AluSc SINE Alu 1 305 -4 2233 217 71 12 chr10 21070877 21071439 -119245326 + L1MCa LINE L1 1 595 -5831 254 260 41 0 chr10 21071443 21071516 -119245249 + L1MCa LINE L1 2088 2163 -4263 * 701 242 73 45 chr10 21071515 21072101 -119244664 + L1MCa LINE L1 2116 2719 -3707 680 193 80 0 chr10 21072087 21072274 -119244491 + L1M4 LINE L1 4487 4688 -1458 * 756 194 32 11 chr10 21072275 21072461 -119244304 + L1MC2 LINE L1 6149 6338 -6 410 94 60 0 chr10 21072502 21072619 -119244146 + (TA)n Simple_repeat Simple_repeat 1 124 0 395 281 76 12 chr10 21073284 21073455 -119243310 - MIR SINE MIR 0 262 81 2000 123 0 4 chr10 21073508 21073785 -119242980 - AluSg SINE Alu -30 280 5 21 0 0 0 chr10 21074074 21074095 -119242670 + AT_rich Low_complexity Low_complexity 1 21 0 2094 165 89 2 chr10 21074681 21075075 -119241690 - MSTA LTR MaLR 0 428 1 486 254 57 62 chr10 21075119 21075328 -119241437 + MLT1K LTR MaLR 223 430 -158 566 320 102 44 chr10 21075904 21076103 -119240662 + L1ME4a LINE L1 5478 5664 -457 2163 95 3 0 chr10 21076103 21076419 -119240346 - AluSg SINE Alu 0 317 1 566 320 102 44 chr10 21076419 21076630 -119240135 + L1ME4a LINE L1 5664 5913 -208 272 221 70 0 chr10 21076694 21076780 -119239985 - L1MC4 LINE L1 -1337 6705 6614 340 291 45 34 chr10 21076801 21076980 -119239785 + L1ME4a LINE L1 5935 6115 -6 691 307 87 63 chr10 21077316 21077586 -119239179 + LTR33A LTR ERVL 23 310 -213 465 46 0 0 chr10 21077586 21077651 -119239114 - L1PA6 LINE L1 0 6154 6090 691 307 87 63 chr10 21077651 21077826 -119238939 + LTR33A LTR ERVL 310 479 -44 181 0 69 0 chr10 21077963 21077992 -119238773 + (CATTA)n Simple_repeat Simple_repeat 5 35 0 331 357 91 32 chr10 21078132 21078523 -119238242 - L2 LINE L2 -230 3083 2640 838 187 171 0 chr10 21078545 21078732 -119238033 - MLT1A1 LTR MaLR 0 365 147 243 232 259 9 chr10 21078737 21078849 -119237916 + L2 LINE L2 2946 3085 -228 792 143 41 7 chr10 21078976 21079123 -119237642 - MLT1A1 LTR MaLR -213 152 1 568 309 77 9 chr10 21080370 21080590 -119236175 - MIR SINE MIR -26 236 2 1390 181 15 15 chr10 21080913 21081088 -119235677 - AluJb SINE Alu -3 309 132 396 103 0 0 chr10 21081088 21081146 -119235619 + (TG)n Simple_repeat Simple_repeat 1 58 0 1390 181 15 15 chr10 21081146 21081240 -119235525 - AluJb SINE Alu -179 133 40 830 148 0 16 chr10 21082071 21082199 -119234566 + FLAM_C SINE Alu 3 128 -15 40 59 0 0 chr10 21083622 21083690 -119233075 + AT_rich Low_complexity Low_complexity 1 68 0 258 362 11 6 chr10 21084025 21084202 -119232563 - L1M4 LINE L1 -3585 2561 2384 431 188 20 20 chr10 21084277 21084378 -119232387 + LTR56 LTR ERV1 1 101 -344 556 216 10 0 chr10 21084386 21084488 -119232277 - AluJb SINE Alu -77 235 133 1482 214 3 34 chr10 21084488 21084810 -119231955 - AluJb SINE Alu 0 312 1 2040 127 20 6 chr10 21084810 21085157 -119231608 + LTR56 LTR ERV1 94 445 0 1970 151 7 0 chr10 21085426 21085724 -119231041 - AluSq SINE Alu -13 300 1 1725 182 38 58 chr10 21086190 21086586 -119230179 - MLT1B LTR MaLR -2 388 1 387 249 35 81 chr10 21086673 21086870 -119229895 - HAL1 LINE L1 -899 1608 1421 330 316 158 27 chr10 21087075 21087404 -119229361 - HAL1 LINE L1 -1319 1188 817 225 0 0 0 chr10 21089023 21089048 -119227717 + (T)n Simple_repeat Simple_repeat 1 25 0 766 174 0 27 chr10 21089048 21089197 -119227568 + Tigger1 DNA MER2_type 55 199 -2219 2123 125 7 0 chr10 21089198 21089503 -119227262 - AluSq SINE Alu -6 307 1 4115 134 30 30 chr10 21089771 21090497 -119226268 + Tigger1 DNA MER2_type 192 917 -1501 2837 144 40 6 chr10 21090476 21090956 -119225809 + Tigger1 DNA MER2_type 1920 2415 -3 * 332 356 59 0 chr10 21090966 21091101 -119225664 - MIR3 SINE MIR -61 147 5 5128 99 45 6 chr10 21091539 21092448 -119224317 - L1PA13 LINE L1 -4 6159 5214 6546 179 34 4 chr10 21092461 21093759 -119223006 - L1PA13 LINE L1 -1647 4499 3163 22 56 0 0 chr10 21093897 21093933 -119222832 + AT_rich Low_complexity Low_complexity 1 36 0 288 196 0 20 chr10 21095062 21095113 -119221652 + L3 LINE CR1 1517 1566 -11 620 296 25 20 chr10 21095136 21095332 -119221433 - L2 LINE L2 -1 3312 3116 1200 166 30 21 chr10 21095332 21095567 -119221198 - MSTB LTR MaLR 0 426 190 5523 78 23 18 chr10 21095588 21096357 -119220408 - L1PA10 LINE L1 -4 6164 5392 1033 154 126 0 chr10 21096363 21096538 -119220227 - MSTB LTR MaLR -229 197 1 398 333 77 40 chr10 21096538 21096873 -119219892 - L2 LINE L2 -193 3120 2778 5906 224 82 41 chr10 21097301 21100103 -119216662 - L1MC2 LINE L1 -1 6623 3938 2080 125 4 0 chr10 21100103 21100415 -119216350 + AluSx SINE Alu 1 313 0 5906 224 82 41 chr10 21100415 21100778 -119215987 - L1MC2 LINE L1 -2686 3938 3591 6762 55 8 21 chr10 21100778 21101388 -119215377 + L1PA7 LINE L1 5078 5673 -481 2187 110 0 10 chr10 21101388 21101697 -119215068 + AluSc SINE Alu 1 306 -3 6762 55 8 21 chr10 21101697 21102167 -119214598 + L1PA7 LINE L1 5673 6148 -6 5906 224 82 41 chr10 21102167 21102750 -119214015 - L1MC2 LINE L1 -3033 3591 2710 240 246 33 0 chr10 21102775 21102836 -119213929 - MLT1A1 LTR MaLR -6 359 297 2267 223 11 113 chr10 21102847 21103218 -119213547 - L1MC2 LINE L1 -5716 710 303 2171 90 4 0 chr10 21103218 21103495 -119213270 + AluSg1 SINE Alu 1 278 -31 600 50 0 0 chr10 21103495 21103575 -119213190 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2267 223 11 113 chr10 21103575 21103856 -119212909 - L1MC2 LINE L1 -6122 304 146 1710 152 58 36 chr10 21103856 21104186 -119212579 + MER1B DNA MER1_type 1 337 0 2267 223 11 113 chr10 21104186 21104311 -119212454 - L1MC2 LINE L1 -6280 146 10 1486 155 174 35 chr10 21104988 21105362 -119211403 + MSTB LTR MaLR 1 426 0 21 57 0 0 chr10 21105495 21105530 -119211235 + AT_rich Low_complexity Low_complexity 1 35 0 1948 87 36 71 chr10 21107331 21107640 -119209125 - AluY SINE Alu -13 298 1 241 130 19 19 chr10 21107852 21107906 -119208859 + (TA)n Simple_repeat Simple_repeat 2 55 0 261 0 0 0 chr10 21109519 21109548 -119207217 + (TTG)n Simple_repeat Simple_repeat 2 30 0 191 283 192 17 chr10 21109719 21109839 -119206926 + L2 LINE L2 772 912 -2402 226 284 11 45 chr10 21110040 21110128 -119206637 - MIR SINE MIR -27 235 151 21 71 0 0 chr10 21110795 21110837 -119205928 + AT_rich Low_complexity Low_complexity 1 42 0 205 37 37 56 chr10 21110838 21110892 -119205873 + (TTA)n Simple_repeat Simple_repeat 1 53 0 278 226 48 0 chr10 21110918 21111042 -119205723 + (TA)n Simple_repeat Simple_repeat 2 131 0 1655 232 68 18 chr10 21113757 21114197 -119202568 + MLT1C LTR MaLR 6 467 0 341 283 20 10 chr10 21115422 21115521 -119201244 + L2 LINE L2 3208 3307 -6 473 291 91 17 chr10 21115755 21115930 -119200835 + MIR3 SINE MIR 19 206 -2 771 244 0 6 chr10 21116277 21116433 -119200332 - MER8 DNA MER2_type 0 239 85 559 258 0 0 chr10 21116434 21116554 -119200211 + MER63 DNA MER1_type 673 792 -270 318 26 0 0 chr10 21116660 21116699 -119200066 + (CA)n Simple_repeat Simple_repeat 1 39 0 312 220 40 40 chr10 21117170 21117270 -119199495 - LTR67 LTR ERVL -21 536 437 204 208 38 0 chr10 21118891 21118944 -119197821 + (TA)n Simple_repeat Simple_repeat 2 56 0 * 208 151 0 57 chr10 21118909 21118962 -119197803 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 1913 143 0 0 chr10 21119588 21119853 -119196912 + AluSx SINE Alu 3 267 -45 22 0 0 0 chr10 21121322 21121344 -119195421 + AT_rich Low_complexity Low_complexity 1 22 0 30950 33 16 2 chr10 21122369 21128429 -119188336 - L1PA3 LINE L1 0 6155 2 1916 150 0 0 chr10 21129837 21130117 -119186648 - AluSx SINE Alu -30 282 3 374 57 19 0 chr10 21130353 21130406 -119186359 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 593 121 61 0 chr10 21131425 21131590 -119185175 + (TA)n Simple_repeat Simple_repeat 2 176 0 216 67 0 0 chr10 21131878 21131908 -119184857 + (TG)n Simple_repeat Simple_repeat 1 30 0 2421 136 36 45 chr10 21131911 21132381 -119184384 - L1MC1 LINE L1 -11 6322 5857 1933 140 10 7 chr10 21132663 21132970 -119183795 - AluSq SINE Alu -1 312 5 947 269 87 39 chr10 21133317 21133730 -119183035 - LTR16A LTR ERVL 0 450 18 516 32 0 0 chr10 21133905 21133967 -119182798 + (CA)n Simple_repeat Simple_repeat 2 63 0 239 269 37 90 chr10 21134970 21135104 -119181661 + MIR3 SINE MIR 77 203 -5 4713 102 7 1 chr10 21135481 21136167 -119180598 + L1PB2 LINE L1 5460 6149 -2 364 262 101 40 chr10 21137147 21137296 -119179469 + MIR SINE MIR 49 206 -56 29 0 0 0 chr10 21137463 21137492 -119179273 + AT_rich Low_complexity Low_complexity 1 29 0 1767 166 3 32 chr10 21137624 21137938 -119178827 + AluJo SINE Alu 1 305 -7 649 196 0 12 chr10 21137939 21138102 -119178663 + GA-rich Low_complexity Low_complexity 2 162 0 191 300 69 46 chr10 21138759 21138889 -119177876 - L2 LINE L2 0 3313 3181 228 319 14 0 chr10 21138954 21139023 -119177742 + L1ME2 LINE L1 6008 6077 -87 994 217 14 14 chr10 21139423 21139640 -119177125 + U3 snRNA snRNA 1 217 0 600 346 101 23 chr10 21139650 21140306 -119176459 - L2 LINE L2 -834 2480 1774 221 179 0 0 chr10 21140613 21140652 -119176113 + A-rich Low_complexity Low_complexity 1 39 0 459 329 26 0 chr10 21141043 21141198 -119175567 - LTR33 LTR ERVL -360 161 3 196 307 69 30 chr10 21141465 21141566 -119175199 + MIR SINE MIR 114 218 -44 1466 219 23 13 chr10 21142052 21142358 -119174407 - AluJo SINE Alu -3 309 1 25 31 0 0 chr10 21142358 21142390 -119174375 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 21142648 21142672 -119174093 + AT_rich Low_complexity Low_complexity 1 24 0 262 294 0 11 chr10 21143108 21143200 -119173565 + (TA)n Simple_repeat Simple_repeat 2 92 0 3676 144 31 69 chr10 21143217 21143373 -119173392 + Tigger1 DNA MER2_type 1 161 -2257 7342 43 4 0 chr10 21143373 21144873 -119171892 - L1PA5 LINE L1 -1 6153 4651 3676 144 31 69 chr10 21144873 21145424 -119171341 + Tigger1 DNA MER2_type 161 681 -1737 2092 142 12 6 chr10 21145561 21145905 -119170860 + Tigger1 DNA MER2_type 714 1059 -1359 847 208 0 6 chr10 21145936 21146104 -119170661 + Tigger1 DNA MER2_type 2252 2418 0 1849 133 13 41 chr10 21146326 21146642 -119170123 - AluSx SINE Alu -3 309 3 213 94 0 0 chr10 21146648 21146680 -119170085 + (T)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr10 21146814 21146839 -119169926 + AT_rich Low_complexity Low_complexity 1 25 0 1171 202 40 21 chr10 21148388 21148722 -119168043 - MLT1B LTR MaLR 0 390 4 210 118 0 0 chr10 21151117 21151151 -119165614 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1737 175 31 8 chr10 21151258 21151613 -119165152 - L1MA6 LINE L1 0 6300 5938 643 292 59 9 chr10 21151898 21152117 -119164648 + MIR SINE MIR 26 255 -7 202 174 43 0 chr10 21152144 21152190 -119164575 + GA-rich Low_complexity Low_complexity 3 50 0 1973 148 107 18 chr10 21153740 21154131 -119162634 - MSTA LTR MaLR -2 426 1 352 330 140 61 chr10 21154415 21154887 -119161878 + L2 LINE L2 2235 2743 -571 469 266 203 10 chr10 21155272 21155479 -119161286 - MIR SINE MIR -9 253 7 258 180 0 0 chr10 21155651 21155701 -119161064 + L1MA6 LINE L1 6251 6300 0 1430 123 8 0 chr10 21156175 21156410 -119160355 + L1MA5A LINE L1 6059 6295 -2 1663 197 10 7 chr10 21156412 21156712 -119160053 + AluJo SINE Alu 1 301 -11 37 39 0 0 chr10 21156737 21156788 -119159977 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 21157333 21157354 -119159411 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 21157497 21157518 -119159247 + AT_rich Low_complexity Low_complexity 1 21 0 295 98 48 17 chr10 21159087 21159151 -119157614 + L1PA13 LINE L1 6065 6129 -34 5493 121 8 4 chr10 21159189 21160025 -119156740 - L1PA13 LINE L1 -55 6108 5269 324 332 98 59 chr10 21160142 21160428 -119156337 + L2 LINE L2 2056 2352 -962 235 185 169 0 chr10 21160702 21160767 -119155998 + Charlie2 DNA MER1_type 2228 2303 -559 595 152 98 9 chr10 21161204 21161345 -119155420 + AluJb SINE Alu 161 311 0 624 260 121 26 chr10 21161356 21161479 -119155286 + Charlie2 DNA MER1_type 2442 2552 -310 1349 118 74 22 chr10 21161479 21161708 -119155057 - L1PA15 LINE L1 0 6165 5925 624 260 121 26 chr10 21161708 21161965 -119154800 + Charlie2 DNA MER1_type 2552 2858 -4 26 30 0 0 chr10 21162558 21162591 -119154174 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 21162650 21162679 -119154086 + AT_rich Low_complexity Low_complexity 1 29 0 280 318 60 34 chr10 21162847 21163196 -119153569 + HAL1b LINE L1 67 424 -924 377 293 131 41 chr10 21163222 21163924 -119152841 + L1MC/D LINE L1 3893 4657 -1489 364 329 35 48 chr10 21164132 21164363 -119152402 + L1MC/D LINE L1 4807 5034 -1112 2422 177 22 84 chr10 21164717 21165264 -119151501 - MLT2B2 LTR ERVL -2 513 1 984 248 138 21 chr10 21165269 21165652 -119151113 + L1MC/D LINE L1 5373 5800 -2008 2148 123 6 22 chr10 21165924 21166240 -119150525 + AluSx SINE Alu 1 311 -1 704 227 71 0 chr10 21166261 21166402 -119150363 + FRAM SINE Alu 1 151 -15 233 372 41 8 chr10 21166409 21166530 -119150235 - MIR SINE MIR -128 134 10 229 360 12 12 chr10 21166878 21166964 -119149801 + MIR SINE MIR 29 114 -148 795 316 78 73 chr10 21167602 21168775 -119147990 + L1ME LINE L1 4046 5224 -922 1780 127 12 82 chr10 21168796 21169127 -119147638 + AluSx SINE Alu 1 308 -4 401 312 66 68 chr10 21169316 21169755 -119147010 + L1ME LINE L1 5321 5758 -363 5929 108 31 4 chr10 21172338 21173313 -119143452 - L1PA13 LINE L1 -11 6152 5167 518 333 93 35 chr10 21173331 21173782 -119142983 - LTR33 LTR ERVL -1 520 44 2095 136 3 0 chr10 21174290 21174584 -119142181 + AluSx SINE Alu 1 295 -17 593 156 0 90 chr10 21175022 21175144 -119141621 - 5S rRNA rRNA -1 120 10 2074 143 0 6 chr10 21175167 21175481 -119141284 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 21176158 21176178 -119140587 + (CAA)n Simple_repeat Simple_repeat 2 21 0 262 271 6 73 chr10 21176831 21177008 -119139757 + L1MEd LINE L1 977 1141 -4978 28 48 0 0 chr10 21177201 21177243 -119139522 + AT_rich Low_complexity Low_complexity 1 42 0 853 167 0 0 chr10 21177248 21177386 -119139379 - AluSg/x SINE Alu -19 293 156 2228 118 0 0 chr10 21177876 21178173 -119138592 + AluSx SINE Alu 1 297 -15 2446 90 0 0 chr10 21179078 21179388 -119137377 + AluSq SINE Alu 1 310 -3 2159 114 3 7 chr10 21181340 21181646 -119135119 - AluSq SINE Alu -6 307 3 22 35 0 0 chr10 21181750 21181779 -119134986 + AT_rich Low_complexity Low_complexity 1 29 0 2073 98 0 46 chr10 21184409 21184715 -119132050 + AluSq SINE Alu 1 292 -21 1083 282 144 2 chr10 21185027 21185449 -119131316 + LTR33 LTR ERVL 32 513 -8 196 382 0 0 chr10 21186128 21186183 -119130582 - MIR SINE MIR -167 95 41 6165 41 1 0 chr10 21186488 21187236 -119129529 + L1PA4 LINE L1 5406 6154 -1 29 28 0 0 chr10 21187252 21187288 -119129477 + AT_rich Low_complexity Low_complexity 1 36 0 2096 124 0 3 chr10 21187667 21187965 -119128800 + AluSx SINE Alu 1 297 -15 248 279 38 25 chr10 21188039 21188118 -119128647 + L2 LINE L2 3232 3311 -2 307 242 113 57 chr10 21188831 21188955 -119127810 + MER94 DNA DNA 1 131 -3 605 304 12 21 chr10 21189110 21189350 -119127415 + L1MEc LINE L1 779 1016 -6122 559 238 28 18 chr10 21190078 21190090 -119126675 + L1MEc LINE L1 1538 1548 -5470 6159 87 24 2 chr10 21190090 21191368 -119125397 - L1PA14 LINE L1 -2 6159 4856 559 238 28 18 chr10 21191368 21191613 -119125152 + L1MEc LINE L1 1548 1936 -5082 494 308 47 49 chr10 21191596 21192005 -119124760 + L1MEc LINE L1 2339 2746 -4392 * 185 214 24 0 chr10 21192909 21192951 -119123814 - MIR SINE MIR -3 259 217 596 240 26 52 chr10 21193153 21193345 -119123420 - LTR67 LTR ERVL -7 550 364 312 355 0 0 chr10 21193444 21193554 -119123211 - LTR67 LTR ERVL -346 211 102 216 387 13 13 chr10 21193712 21193862 -119122903 - L2 LINE L2 -414 2900 2751 228 205 0 0 chr10 21193982 21194021 -119122744 + AluJ/monomer SINE Alu 1 39 -261 529 266 29 7 chr10 21194105 21194244 -119122521 - MIR SINE MIR -112 150 9 21 0 0 0 chr10 21194530 21194551 -119122214 + AT_rich Low_complexity Low_complexity 1 21 0 1634 163 0 8 chr10 21194551 21194808 -119121957 - AluJo SINE Alu -21 291 37 229 26 53 0 chr10 21196507 21196545 -119120220 + (TTG)n Simple_repeat Simple_repeat 2 41 0 192 234 0 0 chr10 21196818 21196865 -119119900 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 243 43 0 0 chr10 21196869 21196915 -119119850 + LTR66 LTR ERVL 394 439 -171 683 273 67 25 chr10 21197231 21197469 -119119296 + MIR SINE MIR 15 262 0 888 162 35 0 chr10 21198902 21199100 -119117665 - L1MA2 LINE L1 0 6304 6100 2339 108 0 0 chr10 21199211 21199517 -119117248 + AluSp SINE Alu 1 306 -7 235 314 9 57 chr10 21199617 21199722 -119117043 + MIR SINE MIR 107 206 -56 239 54 27 0 chr10 21199833 21199870 -119116895 + (CA)n Simple_repeat Simple_repeat 2 39 0 320 301 35 64 chr10 21199906 21200079 -119116686 + MIR3 SINE MIR 34 201 -7 480 286 56 6 chr10 21200585 21200746 -119116019 - MIR SINE MIR 0 262 94 26 0 0 0 chr10 21200852 21200878 -119115887 + AT_rich Low_complexity Low_complexity 1 26 0 23 78 0 0 chr10 21201048 21201099 -119115666 + AT_rich Low_complexity Low_complexity 1 51 0 7032 39 1 0 chr10 21202293 21203142 -119113623 + L1PA4 LINE L1 5305 6154 -1 189 378 51 11 chr10 21203921 21204038 -119112727 - MIR SINE MIR -76 132 5 3603 141 0 3 chr10 21204370 21204943 -119111822 - L1PB4 LINE L1 0 6156 5586 669 260 37 98 chr10 21205125 21205533 -119111232 - L1MDa LINE L1 -6123 417 35 180 0 0 0 chr10 21205552 21205572 -119111193 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 34 0 0 0 chr10 21206037 21206071 -119110694 + AT_rich Low_complexity Low_complexity 1 34 0 1140 203 101 85 chr10 21206357 21206594 -119110171 - MER34B LTR ERV1 0 565 333 207 0 0 0 chr10 21206594 21206617 -119110148 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1140 203 101 85 chr10 21206617 21206931 -119109834 - MER34B LTR ERV1 -232 333 5 1497 359 54 34 chr10 21207105 21208068 -119108697 + L2 LINE L2 206 1187 -2127 358 334 140 50 chr10 21208082 21208519 -119108246 + HAL1 LINE L1 14 489 -2018 776 163 7 22 chr10 21208520 21208655 -119108110 + FLAM_C SINE Alu 1 133 0 2055 173 8 19 chr10 21208714 21208753 -119108012 - MLT1A1 LTR MaLR 0 365 327 2141 156 68 24 chr10 21208753 21208940 -119107825 + MSTA LTR MaLR 1 178 -250 180 0 0 0 chr10 21208940 21208960 -119107805 + (TC)n Simple_repeat Simple_repeat 2 21 0 2141 156 68 24 chr10 21208960 21209182 -119107583 + MSTA LTR MaLR 178 428 0 2055 173 8 19 chr10 21209182 21209511 -119107254 - MLT1A1 LTR MaLR -38 327 1 755 248 129 118 chr10 21209746 21211140 -119105625 + HAL1 LINE L1 758 2166 -341 363 23 0 0 chr10 21211412 21211456 -119105309 + (CA)n Simple_repeat Simple_repeat 1 44 0 189 397 0 32 chr10 21211463 21211589 -119105176 + L2 LINE L2 1233 1354 -1960 319 302 23 16 chr10 21211875 21212004 -119104761 + L2 LINE L2 1698 1827 -1487 319 245 163 0 chr10 21212087 21212185 -119104580 + L2 LINE L2 3185 3298 -15 1729 53 0 49 chr10 21212225 21212450 -119104315 - AluY SINE Alu -13 298 85 1902 157 0 26 chr10 21212681 21212993 -119103772 + AluSx SINE Alu 1 304 -8 207 200 0 22 chr10 21213269 21213314 -119103451 + T-rich Low_complexity Low_complexity 4 47 0 21 0 0 0 chr10 21213620 21213641 -119103124 + AT_rich Low_complexity Low_complexity 1 21 0 2173 119 7 0 chr10 21213759 21214069 -119102696 - AluSx SINE Alu 0 312 1 2319 78 0 16 chr10 21214446 21214753 -119102012 + AluY SINE Alu 1 302 -9 249 264 38 0 chr10 21215168 21215274 -119101491 + (TA)n Simple_repeat Simple_repeat 2 111 0 317 368 52 52 chr10 21215304 21215554 -119101211 - L2 LINE L2 -170 3143 2894 180 327 0 0 chr10 21215615 21215670 -119101095 + L2 LINE L2 3245 3299 -14 267 206 88 0 chr10 21216726 21216794 -119099971 + MIR SINE MIR 109 182 -80 967 192 29 0 chr10 21216794 21216966 -119099799 + MER5A DNA MER1_type 1 177 -12 199 338 86 56 chr10 21217283 21217517 -119099248 - L2 LINE L2 -221 3051 2811 23965 147 14 12 chr10 21218022 21223202 -119093563 - L1PA10 LINE L1 -11 6157 961 735 158 178 0 chr10 21223204 21223350 -119093415 - AluSc SINE Alu -12 297 126 824 149 0 8 chr10 21224357 21224491 -119092274 + AluSq/x SINE Alu 1 133 -179 271 296 132 13 chr10 21224773 21224925 -119091840 - MIR SINE MIR -73 189 20 2790 67 0 21 chr10 21225108 21225484 -119091281 - L1PA8 LINE L1 -2 6170 5803 397 284 92 7 chr10 21225574 21225715 -119091050 + MIR SINE MIR 107 259 -3 1946 157 13 0 chr10 21225819 21226118 -119090647 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 21226446 21226467 -119090298 + AT_rich Low_complexity Low_complexity 1 21 0 296 313 0 25 chr10 21226677 21226757 -119090008 + L2 LINE L2 3186 3263 -9 348 308 20 53 chr10 21226832 21227042 -119089723 - MLT1K LTR MaLR -12 603 374 3868 169 13 4 chr10 21227373 21228071 -119088694 - MER50 LTR ERV1 -30 704 1 354 205 0 0 chr10 21229060 21229138 -119087627 + MADE1 DNA Mariner 3 80 0 2059 118 0 20 chr10 21229235 21229260 -119087505 - AluSx SINE Alu 0 308 284 657 0 0 0 chr10 21229260 21229333 -119087432 + (TTATG)n Simple_repeat Simple_repeat 2 74 0 2059 118 0 20 chr10 21229333 21229621 -119087144 - AluSx SINE Alu -24 284 1 1555 193 33 0 chr10 21229637 21229911 -119086854 - AluJo SINE Alu -29 283 1 219 114 0 0 chr10 21230583 21230618 -119086147 + (TG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 21232073 21232097 -119084668 + AT_rich Low_complexity Low_complexity 1 24 0 306 167 22 11 chr10 21232101 21232191 -119084574 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 129 0 57 chr10 21234044 21234136 -119082629 + (TA)n Simple_repeat Simple_repeat 2 87 -31 12792 38 7 0 chr10 21234136 21236467 -119080298 + L1PA5 LINE L1 3805 6146 -8 344 129 0 57 chr10 21236467 21236498 -119080267 + (TA)n Simple_repeat Simple_repeat 87 118 0 2370 124 19 35 chr10 21236606 21236751 -119080014 - THE1B LTR MaLR 0 364 218 2255 115 0 19 chr10 21236751 21237064 -119079701 - AluSg SINE Alu -2 308 2 2370 124 19 35 chr10 21237064 21237288 -119079477 - THE1B LTR MaLR -146 218 1 1826 154 17 30 chr10 21237868 21238166 -119078599 + AluSx SINE Alu 3 296 -16 180 125 0 0 chr10 21238371 21238403 -119078362 + (GA)n Simple_repeat Simple_repeat 2 33 0 1903 195 56 0 chr10 21238403 21238797 -119077968 - MLT2C2 LTR ERVL -48 416 1 202 266 25 13 chr10 21238964 21239043 -119077722 + CT-rich Low_complexity Low_complexity 2 81 0 2866 53 6 3 chr10 21240085 21240470 -119076295 + L1PA8 LINE L1 5794 6179 0 257 242 61 0 chr10 21240517 21240583 -119076182 + GA-rich Low_complexity Low_complexity 1 70 0 2174 169 60 7 chr10 21240796 21241199 -119075566 - MSTA LTR MaLR 0 428 5 360 0 0 0 chr10 21241263 21241303 -119075462 + (CA)n Simple_repeat Simple_repeat 2 41 0 1706 158 40 4 chr10 21242118 21242390 -119074375 + AluJb SINE Alu 1 282 -30 284 226 58 51 chr10 21242590 21242727 -119074038 + Charlie2 DNA MER1_type 67 204 -2658 333 606 0 11 chr10 21242899 21243079 -119073686 + polypyrimidine Low_complexity Low_complexity 3 180 0 249 141 50 50 chr10 21243063 21243184 -119073581 + CT-rich Low_complexity Low_complexity 2 122 0 * 247 335 39 0 chr10 21243238 21243420 -119073345 + Charlie2a DNA MER1_type 1474 1662 -1200 369 277 9 0 chr10 21243443 21243555 -119073210 + Charlie2a DNA MER1_type 2749 2861 -1 2128 148 0 0 chr10 21244920 21245230 -119071535 + AluSx SINE Alu 1 310 -2 1306 218 76 17 chr10 21245535 21245879 -119070886 - MLT1A2 LTR MaLR -6 368 5 711 192 0 0 chr10 21246172 21246297 -119070468 + AluJb SINE Alu 1 125 -187 354 134 0 0 chr10 21246950 21247017 -119069748 + (TCC)n Simple_repeat Simple_repeat 3 69 0 1686 110 3 116 chr10 21247609 21247951 -119068814 - AluSq SINE Alu 0 315 9 328 252 62 86 chr10 21247993 21248203 -119068562 + LTR33 LTR ERVL 12 216 -305 757 155 4 23 chr10 21248278 21248544 -119068221 + CT-rich Low_complexity Low_complexity 1 261 0 429 268 71 11 chr10 21248545 21248728 -119068037 + LTR33 LTR ERVL 327 520 -1 1554 154 30 77 chr10 21248974 21249272 -119067493 + AluSx SINE Alu 1 284 -28 42 0 0 0 chr10 21249295 21249337 -119067428 + AT_rich Low_complexity Low_complexity 1 42 0 1513 225 0 25 chr10 21249633 21249953 -119066812 - AluJo SINE Alu 0 312 1 2319 104 0 3 chr10 21249960 21250269 -119066496 - AluSx SINE Alu -3 309 2 1601 146 30 86 chr10 21250431 21250732 -119066033 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 21250852 21250896 -119065869 + MIR3 SINE MIR 156 199 -9 282 200 88 0 chr10 21251313 21251393 -119065372 + FRAM SINE Alu 55 141 -25 281 176 0 0 chr10 21251813 21251864 -119064901 + CT-rich Low_complexity Low_complexity 3 53 0 429 268 71 11 chr10 21251865 21252048 -119064717 + LTR33 LTR ERVL 327 520 -1 1625 148 30 74 chr10 21252294 21252591 -119064174 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 21252711 21252755 -119064010 + MIR3 SINE MIR 156 199 -9 615 165 10 10 chr10 21253166 21253269 -119063496 + FRAM SINE Alu 46 148 -28 358 298 85 0 chr10 21254510 21254604 -119062161 - L2 LINE L2 -9 3304 3203 3017 121 76 0 chr10 21254873 21255335 -119061430 - LOR1a LTR ERV1 0 497 1 308 189 15 106 chr10 21256075 21256207 -119060558 - MER5C DNA MER1_type 0 324 205 730 92 0 25 chr10 21256212 21256332 -119060433 + LTR9B LTR ERV1 445 561 -83 712 227 74 0 chr10 21256335 21256538 -119060227 - MER5C DNA MER1_type -106 218 1 4009 149 37 36 chr10 21257039 21257823 -119058942 - LTR1 LTR ERV1 0 785 1 298 265 0 0 chr10 21258132 21258215 -119058550 - L1ME4a LINE L1 -93 6028 5946 697 194 15 15 chr10 21258340 21258541 -119058224 - Charlie1a DNA MER1_type -6 1449 1249 25 51 0 0 chr10 21258541 21258580 -119058185 + AT_rich Low_complexity Low_complexity 1 39 0 2188 144 24 92 chr10 21258774 21259231 -119057534 - MSTB LTR MaLR 0 426 1 328 238 59 0 chr10 21259271 21259372 -119057393 - Charlie1a DNA MER1_type -311 1144 1038 2302 125 59 7 chr10 21259372 21259779 -119056986 + MSTA LTR MaLR 1 428 0 * 2849 215 50 80 chr10 21259779 21260847 -119055918 - Charlie1a DNA MER1_type -417 1038 3 327 85 0 0 chr10 21260851 21260898 -119055867 - MSTB LTR MaLR 0 426 380 1740 169 0 0 chr10 21260898 21261152 -119055613 + AluSx SINE Alu 1 254 -58 255 31 0 0 chr10 21261164 21261196 -119055569 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1102 99 6 11 chr10 21261199 21261380 -119055385 + (GAA)n Simple_repeat Simple_repeat 1 180 0 204 40 0 0 chr10 21261382 21261407 -119055358 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2072 179 13 5 chr10 21261417 21261803 -119054962 - MSTB LTR MaLR -37 389 1 362 320 88 0 chr10 21261807 21262001 -119054764 - L1ME4a LINE L1 -270 5851 5641 1154 204 82 22 chr10 21262045 21262314 -119054451 + AluJo SINE Alu 1 285 -17 777 76 0 0 chr10 21262315 21262420 -119054345 + (TA)n Simple_repeat Simple_repeat 1 105 0 314 200 33 33 chr10 21262977 21263067 -119053698 - L1MC4 LINE L1 -1340 6702 6613 357 339 15 15 chr10 21265872 21266002 -119050763 - L2 LINE L2 -2 3270 3141 228 307 23 34 chr10 21266000 21266088 -119050677 + MIR3 SINE MIR 116 202 -6 * 1978 168 0 0 chr10 21266101 21266405 -119050360 + AluJo SINE Alu 2 305 -7 1821 170 0 26 chr10 21267237 21267548 -119049217 + AluJo SINE Alu 1 303 -9 1198 144 0 0 chr10 21267690 21267864 -119048901 + FRAM SINE Alu 1 167 -9 4119 197 35 19 chr10 21268525 21268945 -119047820 + L1MB4 LINE L1 4152 4564 -1616 2410 117 11 16 chr10 21268945 21269320 -119047445 + THE1C LTR MaLR 3 375 0 4119 197 35 19 chr10 21269320 21270888 -119045877 + L1MB4 LINE L1 4564 6162 -18 25 0 0 0 chr10 21270894 21270919 -119045846 + AT_rich Low_complexity Low_complexity 1 25 0 463 136 0 0 chr10 21270926 21271007 -119045758 + L1MB8 LINE L1 6097 6177 -1 249 303 0 13 chr10 21273292 21273368 -119043397 + (TG)n Simple_repeat Simple_repeat 2 76 0 198 0 0 0 chr10 21273379 21273401 -119043364 + (TG)n Simple_repeat Simple_repeat 2 23 0 2773 16 0 3 chr10 21273509 21273821 -119042944 - AluY SINE Alu 0 311 1 243 125 0 0 chr10 21274595 21274635 -119042130 + (CA)n Simple_repeat Simple_repeat 1 40 0 1073 154 127 0 chr10 21275150 21275277 -119041488 - L1MA9 LINE L1 -14 6298 6189 252 0 0 0 chr10 21275277 21275305 -119041460 + (TG)n Simple_repeat Simple_repeat 1 28 0 1073 154 127 0 chr10 21275305 21275436 -119041329 - L1MA9 LINE L1 -123 6189 6007 2325 104 0 0 chr10 21276050 21276347 -119040418 - AluSq SINE Alu -16 297 1 849 234 34 75 chr10 21277016 21277485 -119039280 - L1MC5 LINE L1 -90 7871 7422 37 0 0 0 chr10 21277486 21277523 -119039242 + AT_rich Low_complexity Low_complexity 1 37 0 306 299 112 52 chr10 21278561 21279123 -119037642 - MLT1L LTR MaLR -6 609 14 1397 229 16 10 chr10 21279948 21280336 -119036429 - L1M4 LINE L1 -3028 3929 3540 * 1719 240 63 63 chr10 21280335 21281583 -119035182 - L1M4 LINE L1 -4833 2022 858 1351 194 48 35 chr10 21281586 21281875 -119034890 - AluJo SINE Alu -6 306 14 2184 112 0 3 chr10 21281952 21282255 -119034510 - AluSx SINE Alu -10 302 1 1099 308 70 35 chr10 21282262 21282345 -119034420 - L1M4 LINE L1 -6052 807 728 1887 112 32 18 chr10 21282345 21282623 -119034142 + AluSx SINE Alu 3 284 -28 1099 308 70 35 chr10 21282623 21283251 -119033514 - L1M4 LINE L1 -6131 728 11 1644 167 52 46 chr10 21283277 21283436 -119033329 - LTR35 LTR ERV1 0 618 461 2188 96 23 0 chr10 21283436 21283737 -119033028 + AluSg SINE Alu 1 308 -2 1644 167 52 46 chr10 21283737 21283781 -119032984 - LTR35 LTR ERV1 -157 461 419 2748 191 5 45 chr10 21283781 21283821 -119032944 + MER41D LTR ERV1 1 41 -516 1932 126 0 24 chr10 21283821 21284114 -119032651 - AluY SINE Alu -17 294 9 2748 191 5 45 chr10 21284114 21284653 -119032112 + MER41D LTR ERV1 41 557 0 1644 167 52 46 chr10 21284653 21284814 -119031951 - LTR35 LTR ERV1 -199 419 251 1592 145 40 48 chr10 21284829 21285181 -119031584 + LTR23 LTR ERV1 89 437 0 215 381 79 7 chr10 21285299 21285438 -119031327 - L2 LINE L2 -2 3270 3122 361 339 101 31 chr10 21285699 21286056 -119030709 - L2 LINE L2 -665 2649 2268 917 99 11 17 chr10 21286113 21286294 -119030471 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2081 133 13 7 chr10 21286294 21286734 -119030031 - AluSx SINE Alu 0 442 1 1275 181 4 4 chr10 21286875 21287129 -119029636 - L1MA6 LINE L1 0 6300 6047 892 196 108 5 chr10 21287204 21287418 -119029347 - MER46A DNA MER2_type 0 236 1 2805 16 0 9 chr10 21288992 21289309 -119027456 + AluYb8 SINE Alu 1 314 -4 183 398 43 0 chr10 21289592 21289685 -119027080 - L2 LINE L2 -26 3246 3150 1912 202 6 3 chr10 21290275 21290637 -119026128 - MLT1A1 LTR MaLR -2 363 1 251 289 24 24 chr10 21290782 21290865 -119025900 + MIR SINE MIR 76 158 -104 1940 166 10 0 chr10 21291325 21291633 -119025132 - AluSx SINE Alu -1 311 1 2212 157 53 22 chr10 21292322 21292545 -119024220 - MSTB LTR MaLR 0 426 182 2277 84 0 0 chr10 21292545 21292854 -119023911 - AluSp SINE Alu 0 309 1 2212 157 53 22 chr10 21292854 21293042 -119023723 - MSTB LTR MaLR -244 182 1 340 169 0 46 chr10 21293561 21293626 -119023139 + L2 LINE L2 3201 3262 -10 24 67 0 0 chr10 21293636 21293681 -119023084 + AT_rich Low_complexity Low_complexity 1 45 0 22 103 0 0 chr10 21293770 21293848 -119022917 + AT_rich Low_complexity Low_complexity 1 78 0 192 77 0 0 chr10 21294918 21294944 -119021821 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 225 0 0 chr10 21294948 21295037 -119021728 + MLT1A2 LTR MaLR 5 93 -281 1015 123 0 13 chr10 21295037 21295191 -119021574 + AluSg/x SINE Alu 158 309 -1 648 267 95 30 chr10 21295642 21295741 -119021024 - MIR SINE MIR -1 261 170 6091 168 36 17 chr10 21295741 21296948 -119019817 + Tigger3b DNA MER2_type 1 1230 -1 648 267 95 30 chr10 21296948 21297080 -119019685 - MIR SINE MIR -92 170 15 753 285 46 29 chr10 21298348 21298820 -119017945 - L1ME3A LINE L1 -71 6093 5591 296 296 39 58 chr10 21298851 21299057 -119017708 - MLT1J LTR MaLR -309 202 1 212 294 119 24 chr10 21299063 21299189 -119017576 + L2 LINE L2 2386 2523 -791 214 203 0 17 chr10 21299339 21299398 -119017367 + A-rich Low_complexity Low_complexity 3 60 0 5656 171 16 2 chr10 21299818 21301816 -119014949 + L1PA13 LINE L1 4168 6159 -4 303 191 22 11 chr10 21302251 21302340 -119014425 + CT-rich Low_complexity Low_complexity 2 91 0 811 321 71 42 chr10 21302743 21303359 -119013406 + Tigger8 DNA MER2_type 24 657 -9 393 321 129 5 chr10 21303702 21303895 -119012870 + MIR SINE MIR 45 261 -1 266 325 25 25 chr10 21305549 21305669 -119011096 - MIR SINE MIR -71 191 72 1815 179 117 28 chr10 21306971 21307367 -119009398 + MLT1D LTR MaLR 32 470 -35 1459 209 3 10 chr10 21307367 21307546 -119009219 - AluJo SINE Alu -13 299 121 393 22 0 0 chr10 21307546 21307592 -119009173 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1459 209 3 10 chr10 21307592 21307713 -119009052 - AluJo SINE Alu -191 121 1 1815 179 117 28 chr10 21307713 21307745 -119009020 + MLT1D LTR MaLR 470 498 -7 477 256 55 6 chr10 21307766 21307930 -119008835 - L1ME LINE L1 -307 5814 5643 1833 169 3 3 chr10 21307944 21308251 -119008514 + AluJb SINE Alu 1 307 -5 23 0 0 0 chr10 21308289 21308312 -119008453 + AT_rich Low_complexity Low_complexity 1 23 0 455 269 29 0 chr10 21308471 21308575 -119008190 - U6 snRNA snRNA 0 107 1 1157 141 4 98 chr10 21309149 21309383 -119007382 + AluJb SINE Alu 85 296 -16 1894 123 18 21 chr10 21309385 21309698 -119007067 + AluSx SINE Alu 1 312 0 2161 100 0 4 chr10 21310441 21310747 -119006018 + AluSx SINE Alu 2 306 0 525 242 83 0 chr10 21310794 21310914 -119005851 + FLAM_A SINE Alu 1 130 -3 301 306 0 97 chr10 21311061 21311247 -119005518 + MER5A DNA MER1_type 3 170 -19 180 0 0 0 chr10 21311384 21311404 -119005361 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2115 97 4 4 chr10 21311404 21311682 -119005083 - AluSq SINE Alu -33 280 3 1532 156 0 33 chr10 21311988 21312232 -119004533 + AluJb SINE Alu 1 236 -76 185 83 28 0 chr10 21312257 21312293 -119004472 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 236 196 0 0 chr10 21312297 21312348 -119004417 + LTR66 LTR ERVL 389 439 -171 856 213 6 0 chr10 21312356 21312520 -119004245 + FRAM SINE Alu 1 165 -11 2500 178 83 99 chr10 21312650 21313387 -119003378 + LTR8A LTR ERV1 1 725 -2 1953 146 0 27 chr10 21313474 21313769 -119002996 + AluJb SINE Alu 1 287 -25 1689 172 61 22 chr10 21314440 21314801 -119001964 - THE1C LTR MaLR 0 375 1 2260 156 9 36 chr10 21316810 21317167 -118999598 + L1MB3 LINE L1 5742 6086 -97 1965 155 0 0 chr10 21317167 21317458 -118999307 - AluSx SINE Alu -21 291 1 2260 156 9 36 chr10 21317458 21317550 -118999215 + L1MB3 LINE L1 6086 6179 -4 1425 153 118 38 chr10 21317978 21318265 -118998500 - AluJb SINE Alu -2 310 1 25 31 0 0 chr10 21318633 21318665 -118998100 + AT_rich Low_complexity Low_complexity 1 32 0 8587 248 45 49 chr10 21318710 21321137 -118995628 + L1MB7 LINE L1 2 2439 -4233 1792 159 10 13 chr10 21321137 21321445 -118995320 + AluSx SINE Alu 1 307 -5 8587 248 45 49 chr10 21321445 21323791 -118992974 + L1MB7 LINE L1 2439 4844 -1828 1480 218 70 24 chr10 21323791 21324162 -118992603 + MLT1B LTR MaLR 1 388 -2 8587 248 45 49 chr10 21324162 21325429 -118991336 + L1MB7 LINE L1 4844 6116 -556 2388 172 39 20 chr10 21325434 21325928 -118990837 + L1MB7 LINE L1 6164 6666 -16 2558 138 14 21 chr10 21328541 21328977 -118987788 - Tigger2a DNA MER2_type -1 433 1 521 278 117 24 chr10 21329508 21329713 -118987052 - MIR SINE MIR -27 235 12 186 189 0 0 chr10 21330596 21330633 -118986132 + T-rich Low_complexity Low_complexity 1 37 0 228 235 0 44 chr10 21332348 21332416 -118984349 + A-rich Low_complexity Low_complexity 1 65 0 414 0 0 0 chr10 21332459 21332505 -118984260 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 23 23 0 chr10 21333263 21333307 -118983458 + (CA)n Simple_repeat Simple_repeat 2 46 0 475 304 176 3 chr10 21333785 21334097 -118982668 + L1ME3A LINE L1 4156 4521 -1625 390 285 82 55 chr10 21334105 21334526 -118982239 + L1ME3A LINE L1 4566 5011 -1135 2070 167 17 0 chr10 21334526 21334886 -118981879 + MER47A DNA MER2_type 1 366 0 390 285 82 55 chr10 21334886 21335082 -118981683 + L1ME3A LINE L1 5011 5200 -946 1434 190 38 19 chr10 21335137 21335400 -118981365 - AluJb SINE Alu -44 268 1 352 192 39 128 chr10 21335447 21335650 -118981115 + L1ME3A LINE L1 5318 5502 -662 803 180 38 27 chr10 21335650 21335833 -118980932 + MLT1A2 LTR MaLR 1 185 -189 351 184 0 0 chr10 21335833 21335920 -118980845 + CT-rich Low_complexity Low_complexity 1 87 0 698 231 22 11 chr10 21335950 21336132 -118980633 + MLT1A2 LTR MaLR 191 374 0 261 0 0 0 chr10 21336318 21336347 -118980418 + (TA)n Simple_repeat Simple_repeat 1 29 0 313 261 108 58 chr10 21336376 21336617 -118980148 + L1ME3A LINE L1 5656 5908 -262 2982 198 33 58 chr10 21338841 21339664 -118977101 - L1MB7 LINE L1 -57 6625 5842 4403 182 14 13 chr10 21339664 21340456 -118976309 - MER54B LTR ERVL 0 793 1 2982 198 33 58 chr10 21340456 21340763 -118976002 - L1MB7 LINE L1 -840 5842 5529 1052 218 40 30 chr10 21340762 21341166 -118975599 - L1MB7 LINE L1 -4896 1646 1239 * 22 35 0 0 chr10 21341517 21341546 -118975219 + AT_rich Low_complexity Low_complexity 1 29 0 2289 113 0 0 chr10 21342515 21342816 -118973949 + AluSx SINE Alu 1 301 -11 1209 209 27 62 chr10 21343314 21343522 -118973243 - MLT1A2 LTR MaLR -11 363 172 2153 128 7 0 chr10 21343522 21343826 -118972939 - AluSx SINE Alu -6 306 1 1209 209 27 62 chr10 21343826 21343990 -118972775 - MLT1A2 LTR MaLR -202 172 4 27 29 0 0 chr10 21344261 21344295 -118972470 + AT_rich Low_complexity Low_complexity 1 34 0 1593 213 10 7 chr10 21344297 21344598 -118972167 - AluJb SINE Alu -10 302 1 1802 179 47 28 chr10 21344628 21345177 -118971588 + MLT2A1 LTR ERVL 1 554 0 201 254 0 0 chr10 21345938 21345997 -118970768 + (TA)n Simple_repeat Simple_repeat 1 59 0 278 26 26 0 chr10 21345999 21346038 -118970727 + (GA)n Simple_repeat Simple_repeat 1 40 0 548 175 24 63 chr10 21347957 21348118 -118968647 - FLAM_A SINE Alu 0 133 1 1007 279 55 80 chr10 21348336 21349640 -118967125 - L1MEc LINE L1 -4310 2812 1541 279 79 0 0 chr10 21349645 21349683 -118967082 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 803 201 0 20 chr10 21349687 21349836 -118966929 - FRAM SINE Alu -30 146 1 838 288 53 12 chr10 21349837 21350177 -118966588 - L1MEc LINE L1 -5091 1332 979 1721 184 33 50 chr10 21350545 21350942 -118965823 + MLT1B LTR MaLR 1 390 0 4375 66 12 0 chr10 21351235 21352131 -118964634 + L1P3 LINE L1 4756 5657 -497 229 255 0 0 chr10 21352548 21352599 -118964166 - MIR SINE MIR -28 234 184 763 148 30 108 chr10 21352621 21352688 -118964077 - MER3 DNA MER1_type -13 196 125 5551 115 19 7 chr10 21352688 21353707 -118963058 - L1PA13 LINE L1 -5 6158 5131 763 148 30 108 chr10 21353707 21353842 -118962923 - MER3 DNA MER1_type -84 125 10 2489 81 0 3 chr10 21353894 21354204 -118962561 + AluY SINE Alu 1 309 -2 2036 130 0 19 chr10 21354641 21354957 -118961808 + AluSx SINE Alu 1 310 -2 183 269 167 28 chr10 21355356 21355464 -118961301 + L2 LINE L2 3190 3312 -1 771 180 37 0 chr10 21355824 21355985 -118960780 - L1MA9 LINE L1 -364 5948 5782 271 132 52 58 chr10 21355990 21356164 -118960601 + (TA)n Simple_repeat Simple_repeat 1 173 0 2371 165 3 18 chr10 21356205 21356677 -118960088 - L1MA9 LINE L1 -543 5769 5304 2179 64 0 4 chr10 21356768 21357034 -118959731 - AluY SINE Alu -19 292 28 201 147 0 0 chr10 21357071 21357105 -118959660 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1985 102 39 14 chr10 21357245 21357530 -118959235 + AluSc SINE Alu 1 292 -17 1700 154 34 27 chr10 21357560 21357678 -118959087 + AluJo SINE Alu 10 126 -186 216 0 0 0 chr10 21357678 21357702 -118959063 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1700 154 34 27 chr10 21357702 21357875 -118958890 + AluJo SINE Alu 126 303 -9 206 214 0 0 chr10 21357962 21358004 -118958761 + GA-rich Low_complexity Low_complexity 1 42 0 188 273 78 78 chr10 21358299 21358427 -118958338 - L3b LINE CR1 -336 1247 1120 420 206 87 60 chr10 21361082 21361300 -118955465 - L1M4 LINE L1 -1357 4789 4566 2387 107 7 0 chr10 21361395 21361705 -118955060 - AluSx SINE Alu 0 312 1 414 336 46 23 chr10 21362645 21362862 -118953903 + L2 LINE L2 2545 2766 -548 225 0 0 0 chr10 21363000 21363025 -118953740 + (T)n Simple_repeat Simple_repeat 1 25 0 1266 130 4 15 chr10 21363357 21363596 -118953169 + AluY SINE Alu 1 301 -10 277 274 75 9 chr10 21364345 21364451 -118952314 + MLT1K LTR MaLR 1 113 -475 370 218 0 163 chr10 21364786 21364933 -118951832 + L2 LINE L2 3182 3304 -9 3110 129 35 0 chr10 21365273 21365785 -118950980 - L1PA13 LINE L1 0 6163 5634 189 208 21 42 chr10 21366059 21366107 -118950658 + L2 LINE L2 3261 3307 -6 380 255 52 46 chr10 21366692 21366845 -118949920 + MIR SINE MIR 12 165 -97 303 71 0 0 chr10 21368159 21368201 -118948564 + (GA)n Simple_repeat Simple_repeat 2 43 0 338 333 94 66 chr10 21368585 21368903 -118947862 - L2 LINE L2 0 3272 2946 241 171 0 0 chr10 21369033 21369074 -118947691 - Alu SINE Alu -260 43 3 1835 165 0 16 chr10 21369737 21370040 -118946725 + AluJo SINE Alu 3 300 -12 233 296 0 0 chr10 21370734 21370788 -118945977 + L2 LINE L2 3252 3305 -8 225 0 0 0 chr10 21371231 21371256 -118945509 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 22 0 0 chr10 21371255 21371301 -118945464 + (TG)n Simple_repeat Simple_repeat 2 47 0 1319 154 158 12 chr10 21371832 21372107 -118944658 - AluJo SINE Alu 0 312 2 2068 142 0 0 chr10 21372749 21373051 -118943714 + AluSq SINE Alu 1 302 -11 1459 99 54 18 chr10 21373100 21373321 -118943444 - MER30 DNA MER1_type -1 229 1 356 317 69 7 chr10 21373337 21373482 -118943283 + MIR SINE MIR 25 178 -84 252 281 118 37 chr10 21374179 21374314 -118942451 - MIR3 SINE MIR -5 203 58 21 36 0 0 chr10 21374338 21374366 -118942399 + AT_rich Low_complexity Low_complexity 1 28 0 310 313 62 39 chr10 21375248 21375427 -118941338 - L1ME4a LINE L1 -1 6120 5938 624 258 66 1 chr10 21375436 21375628 -118941137 + MIR SINE MIR 61 262 0 989 207 0 11 chr10 21375839 21376027 -118940738 + AluJb SINE Alu 1 186 -126 21 0 0 0 chr10 21376836 21376857 -118939908 + AT_rich Low_complexity Low_complexity 1 21 0 2736 154 29 10 chr10 21377406 21377924 -118938841 + L1MA4A LINE L1 5774 6301 -2 189 0 0 0 chr10 21378416 21378437 -118938328 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1653 155 54 30 chr10 21378442 21378739 -118938026 - AluJo SINE Alu -8 304 1 188 302 0 0 chr10 21378967 21379020 -118937745 + MIR SINE MIR 94 146 -62 2108 202 29 27 chr10 21379362 21379847 -118936918 - MER66B LTR ERV1 0 486 1 2016 122 48 14 chr10 21380637 21380989 -118935776 - THE1B LTR MaLR 0 364 1 547 256 119 0 chr10 21381312 21381480 -118935285 + MER5A DNA MER1_type 1 188 -1 398 341 83 18 chr10 21381544 21381773 -118934992 - MIR SINE MIR -4 258 15 616 128 0 0 chr10 21381883 21381969 -118934796 + AluJ/FLAM SINE Alu 1 86 -226 21 36 0 0 chr10 21381976 21382004 -118934761 + AT_rich Low_complexity Low_complexity 1 28 0 2082 147 33 14 chr10 21383245 21383613 -118933152 + THE1C LTR MaLR 1 375 0 2070 144 0 7 chr10 21385386 21385692 -118931073 - AluSx SINE Alu -7 305 2 322 195 184 0 chr10 21385861 21385948 -118930817 + MER5A DNA MER1_type 10 112 -77 1883 132 3 66 chr10 21385968 21386301 -118930464 + AluJb SINE Alu 1 312 0 738 189 0 0 chr10 21387235 21387401 -118929364 - FLAM_C SINE Alu 0 166 1 908 185 49 0 chr10 21388221 21388405 -118928360 + MER20 DNA MER1_type 1 193 -26 21 0 0 0 chr10 21388788 21388809 -118927956 + AT_rich Low_complexity Low_complexity 1 21 0 350 231 135 19 chr10 21388884 21388988 -118927777 + L2 LINE L2 3190 3305 -8 180 0 0 0 chr10 21389072 21389092 -118927673 + (TTG)n Simple_repeat Simple_repeat 2 21 0 333 330 9 9 chr10 21389224 21389330 -118927435 + MIR SINE MIR 36 141 -67 1342 171 4 0 chr10 21389339 21389573 -118927192 - MER46A DNA MER2_type 0 236 2 2220 112 0 31 chr10 21389649 21389970 -118926795 + AluY SINE Alu 1 311 0 486 46 0 0 chr10 21390201 21390266 -118926499 + (CA)n Simple_repeat Simple_repeat 2 66 0 424 297 126 16 chr10 21390850 21391032 -118925733 - MIR SINE MIR 0 262 61 321 339 55 0 chr10 21392141 21392268 -118924497 + L2 LINE L2 3138 3271 -1 1909 181 79 10 chr10 21392665 21392865 -118923900 - MSTB1 LTR MaLR 0 432 247 315 49 0 0 chr10 21392865 21392906 -118923859 + (GA)n Simple_repeat Simple_repeat 1 41 0 1909 181 79 10 chr10 21392906 21393090 -118923675 - MSTB1 LTR MaLR -185 247 16 240 43 43 21 chr10 21393090 21393137 -118923628 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1909 181 79 10 chr10 21393137 21393155 -118923610 - MSTB1 LTR MaLR -416 16 1 181 319 0 0 chr10 21393482 21393529 -118923236 - L3b LINE CR1 -9 1574 1528 2033 140 7 0 chr10 21393582 21393875 -118922890 - AluSx SINE Alu -17 295 1 307 211 28 162 chr10 21394425 21394567 -118922198 + L2 LINE L2 3143 3265 -7 2259 103 0 31 chr10 21394858 21395179 -118921586 - AluSx SINE Alu 0 312 2 23 33 0 0 chr10 21395968 21395998 -118920767 + AT_rich Low_complexity Low_complexity 1 30 0 256 288 41 0 chr10 21396227 21396300 -118920465 - L2 LINE L2 -1 3312 3237 1347 191 61 22 chr10 21397871 21398149 -118918616 - AluJo SINE Alu -23 289 1 23 33 0 0 chr10 21398361 21398391 -118918374 + AT_rich Low_complexity Low_complexity 1 30 0 181 324 73 29 chr10 21398511 21398579 -118918186 - L2 LINE L2 -18 3295 3225 1255 192 71 47 chr10 21400043 21400407 -118916358 - MLT1D LTR MaLR -42 463 91 3272 193 13 44 chr10 21400430 21400910 -118915855 - LTR39 LTR ERV1 0 783 336 2058 140 10 0 chr10 21400910 21401210 -118915555 - AluSq SINE Alu -10 303 1 3272 193 13 44 chr10 21401210 21401518 -118915247 - LTR39 LTR ERV1 -447 336 20 234 234 47 0 chr10 21401507 21401571 -118915194 - MLT1D LTR MaLR -192 313 247 * 23 0 0 0 chr10 21401919 21401942 -118914823 + AT_rich Low_complexity Low_complexity 1 23 0 1328 145 4 4 chr10 21401962 21402189 -118914576 - L1PA15 LINE L1 -7 6158 5932 1680 153 0 81 chr10 21402966 21403299 -118913466 + AluJb SINE Alu 7 312 0 230 160 20 0 chr10 21403300 21403350 -118913415 + GA-rich Low_complexity Low_complexity 3 53 0 235 289 67 19 chr10 21403362 21403466 -118913299 + MIR SINE MIR 106 214 -48 33 85 0 0 chr10 21403466 21403548 -118913217 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr10 21403617 21403645 -118913120 + AT_rich Low_complexity Low_complexity 1 28 0 215 211 0 19 chr10 21404256 21404272 -118912493 + (CTA)n Simple_repeat Simple_repeat 1 16 -35 2301 114 0 0 chr10 21404272 21404571 -118912194 - AluSx SINE Alu -13 299 1 215 211 0 19 chr10 21404571 21404606 -118912159 + (CTA)n Simple_repeat Simple_repeat 16 51 0 469 297 110 38 chr10 21404678 21404887 -118911878 - MIR SINE MIR -13 249 26 2008 84 18 25 chr10 21405468 21405754 -118911011 + AluSq SINE Alu 26 309 -4 429 303 21 28 chr10 21405760 21405902 -118910863 + L2 LINE L2 3172 3312 -1 857 189 0 51 chr10 21407329 21407504 -118909261 - FRAM SINE Alu 0 166 1 198 340 134 43 chr10 21408602 21408811 -118907954 - L2 LINE L2 -219 3053 2826 198 402 0 0 chr10 21408875 21408962 -118907803 + L3 LINE CR1 1469 1555 -22 1386 99 0 11 chr10 21410364 21410545 -118906220 + AluSg/x SINE Alu 125 303 -7 189 0 0 0 chr10 21410545 21410566 -118906199 + (GA)n Simple_repeat Simple_repeat 2 22 0 244 189 27 0 chr10 21411113 21411187 -118905578 + GA-rich Low_complexity Low_complexity 1 76 0 518 301 142 28 chr10 21411292 21411687 -118905078 + MLT1J LTR MaLR 23 462 -49 776 203 7 20 chr10 21412126 21412274 -118904491 - FRAM SINE Alu -19 157 12 199 255 0 0 chr10 21413228 21413275 -118903490 + L2 LINE L2 3216 3262 -10 188 300 0 0 chr10 21413401 21413441 -118903324 - MIR SINE MIR -18 244 205 1643 173 14 38 chr10 21414179 21414526 -118902239 - MER44D DNA MER2_type 0 609 1 2159 137 0 0 chr10 21415036 21415336 -118901429 - AluSx SINE Alu -12 300 1 183 323 32 43 chr10 21416362 21416455 -118900310 - MIR SINE MIR -142 120 29 395 328 101 21 chr10 21416514 21416752 -118900013 + L3 LINE CR1 764 1020 -557 180 77 0 0 chr10 21416968 21416994 -118899771 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 2562 50 0 19 chr10 21417036 21417353 -118899412 - AluY SINE Alu 0 311 1 376 209 45 68 chr10 21417956 21417976 -118898789 - Charlie1b DNA MER1_type -2259 502 483 1849 135 26 32 chr10 21417976 21418288 -118898477 - AluJb SINE Alu -2 310 1 376 209 45 68 chr10 21418288 21418444 -118898321 - Charlie1b DNA MER1_type -2278 483 330 10312 28 2 0 chr10 21418448 21420442 -118896323 - L1PA3 LINE L1 0 6155 4155 3438 30 2 0 chr10 21420442 21420870 -118895895 + L1PA3 LINE L1 3715 4143 -2003 1055 237 73 19 chr10 21420870 21421187 -118895578 - Charlie1b DNA MER1_type -188 335 2 2291 119 0 3 chr10 21421330 21421641 -118895124 + AluSx SINE Alu 1 310 -2 29 0 0 0 chr10 21423295 21423324 -118893441 + AT_rich Low_complexity Low_complexity 1 29 0 422 266 111 29 chr10 21423917 21424124 -118892641 - MIR SINE MIR -19 243 20 25 0 0 0 chr10 21424308 21424333 -118892432 + AT_rich Low_complexity Low_complexity 1 25 0 1593 150 0 7 chr10 21424333 21424606 -118892159 - L1PA16 LINE L1 -3 6163 5893 1046 76 0 0 chr10 21424635 21424767 -118891998 - AluY SINE Alu -179 132 1 261 0 0 0 chr10 21424769 21424798 -118891967 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 21424849 21424872 -118891893 + AT_rich Low_complexity Low_complexity 1 23 0 760 244 77 27 chr10 21426283 21426504 -118890261 - MIR SINE MIR -28 234 3 200 57 0 29 chr10 21428321 21428356 -118888409 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr10 21428615 21428653 -118888112 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 0 chr10 21428735 21428776 -118887989 - L1PA7 LINE L1 -3 6151 6111 * 3631 62 10 0 chr10 21428769 21429255 -118887510 + L1PA7 LINE L1 5389 5879 -275 832 212 24 91 chr10 21429437 21429777 -118886988 - MER33 DNA MER1_type -7 317 1 954 154 6 30 chr10 21429866 21430035 -118886730 + FRAM SINE Alu 1 165 -11 202 276 121 20 chr10 21430421 21430614 -118886151 + MIR SINE MIR 8 260 -2 649 317 55 39 chr10 21430847 21431159 -118885606 + L2 LINE L2 2961 3277 -36 2382 85 3 19 chr10 21431320 21431637 -118885128 - AluSp SINE Alu -1 312 1 300 314 12 0 chr10 21431796 21431882 -118884883 - MIR SINE MIR -67 141 55 24 32 0 0 chr10 21431949 21431980 -118884785 + AT_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 21432138 21432185 -118884580 + AT_rich Low_complexity Low_complexity 1 47 0 613 146 0 0 chr10 21432282 21432385 -118884380 - L1PA16 LINE L1 0 6166 6064 11858 175 12 7 chr10 21434700 21435067 -118881698 - L1PB1 LINE L1 0 6867 6503 329 0 0 24 chr10 21435067 21435109 -118881656 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 103 0 0 chr10 21435113 21435142 -118881623 + (TA)n Simple_repeat Simple_repeat 2 30 0 11858 175 12 7 chr10 21435142 21436504 -118880261 - L1PB1 LINE L1 -366 6501 5148 216 0 0 0 chr10 21436504 21436528 -118880237 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 11858 175 12 7 chr10 21436528 21438432 -118878333 - L1PB1 LINE L1 -1719 5148 3208 1007 123 17 102 chr10 21438442 21438678 -118878087 - L1PB1 LINE L1 -6014 849 634 1113 152 10 0 chr10 21438678 21438876 -118877889 - L1PB1 LINE L1 -6663 200 1 677 240 45 54 chr10 21440007 21440249 -118876516 - L2 LINE L2 -1 3312 3073 218 189 0 19 chr10 21440262 21440297 -118876468 + (TG)n Simple_repeat Simple_repeat 2 37 -16 2405 215 35 13 chr10 21440297 21440842 -118875923 - MER74A LTR ERVL 0 558 2 218 189 0 19 chr10 21440842 21440859 -118875906 + (TG)n Simple_repeat Simple_repeat 37 53 0 207 298 0 18 chr10 21440862 21440919 -118875846 - L2 LINE L2 -239 3074 3019 245 271 24 0 chr10 21441793 21441878 -118874887 - Charlie2 DNA MER1_type 0 2862 2776 239 284 112 9 chr10 21441945 21442061 -118874704 + L2 LINE L2 2481 2608 -706 418 266 26 53 chr10 21442231 21442573 -118874192 - Charlie2 DNA MER1_type -300 2562 2230 287 238 36 0 chr10 21442619 21442703 -118874062 - Charlie2 DNA MER1_type -2471 311 225 231 143 0 0 chr10 21443899 21443934 -118872831 - MIR SINE MIR -21 241 207 243 0 0 0 chr10 21444261 21444288 -118872477 + (TA)n Simple_repeat Simple_repeat 1 27 0 454 257 33 20 chr10 21444400 21444552 -118872213 - MIR SINE MIR 0 262 109 207 0 0 0 chr10 21444684 21444707 -118872058 + (T)n Simple_repeat Simple_repeat 1 23 0 2046 142 3 3 chr10 21444821 21445131 -118871634 + AluSg SINE Alu 1 310 0 436 275 104 28 chr10 21445659 21445841 -118870924 - MIR3 SINE MIR -3 205 10 1059 169 135 82 chr10 21447214 21447569 -118869196 + THE1C LTR MaLR 1 374 -1 198 156 0 0 chr10 21448008 21448053 -118868712 + (CA)n Simple_repeat Simple_repeat 2 46 0 293 222 0 22 chr10 21448117 21448207 -118868558 + GA-rich Low_complexity Low_complexity 3 90 0 258 314 32 51 chr10 21448747 21448903 -118867862 - MIR SINE MIR -47 215 63 1870 225 63 33 chr10 21448936 21449769 -118866996 - L1MDa LINE L1 -3700 2840 1984 468 306 11 6 chr10 21449782 21449962 -118866803 - L1MDa LINE L1 -6359 181 1 231 114 0 0 chr10 21449983 21450018 -118866747 + (GAA)n Simple_repeat Simple_repeat 2 36 0 1939 121 9 65 chr10 21450253 21450575 -118866190 - AluSx SINE Alu -8 304 1 217 286 231 39 chr10 21450665 21450847 -118865918 - MIR SINE MIR 0 262 46 217 305 99 33 chr10 21453955 21454106 -118862659 + L3 LINE CR1 1203 1363 -214 1341 137 85 102 chr10 21454361 21454763 -118862002 + LTR1 LTR ERV1 12 406 -379 411 202 0 12 chr10 21454763 21454847 -118861918 - 7SLRNA srpRNA srpRNA -236 84 2 704 211 0 0 chr10 21454851 21454984 -118861781 - FLAM_C SINE Alu 0 133 1 185 65 32 0 chr10 21455036 21455067 -118861698 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1180 198 40 36 chr10 21455072 21455324 -118861441 - AluJo SINE Alu -30 282 30 307 264 33 74 chr10 21455840 21455961 -118860804 + MER91A DNA MER1_type 18 133 -63 2138 118 7 10 chr10 21455979 21456285 -118860480 - AluSx SINE Alu -7 305 1 184 29 29 29 chr10 21457414 21457448 -118859317 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1467 174 34 4 chr10 21457917 21458182 -118858583 + AluJo SINE Alu 10 282 -30 185 333 0 0 chr10 21458878 21458935 -118857830 + MIR SINE MIR 91 147 -115 203 182 23 0 chr10 21461202 21461246 -118855519 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 2315 80 3 16 chr10 21461546 21461859 -118854906 + AluSc SINE Alu 1 309 0 231 229 14 14 chr10 21463194 21463228 -118853537 + GA-rich Low_complexity Low_complexity 3 36 -36 1967 141 3 7 chr10 21463228 21463534 -118853231 + AluSx SINE Alu 6 310 -2 231 229 14 14 chr10 21463534 21463569 -118853196 + GA-rich Low_complexity Low_complexity 35 72 0 252 0 0 0 chr10 21464496 21464524 -118852241 + (TG)n Simple_repeat Simple_repeat 2 29 0 202 358 11 0 chr10 21465633 21465728 -118851037 + MIR SINE MIR 46 141 -121 258 170 0 0 chr10 21465893 21465907 -118850858 + (CA)n Simple_repeat Simple_repeat 2 15 -39 2121 120 0 0 chr10 21465907 21466206 -118850559 + AluSg1 SINE Alu 11 309 0 258 170 0 0 chr10 21466206 21466244 -118850521 + (CA)n Simple_repeat Simple_repeat 14 54 0 716 158 23 12 chr10 21466314 21466485 -118850280 + GA-rich Low_complexity Low_complexity 1 173 0 484 227 87 70 chr10 21468622 21468864 -118847901 - L1ME3A LINE L1 0 6170 5925 1101 229 5 0 chr10 21468866 21469089 -118847676 - MER58A DNA MER1_type 0 224 1 625 227 7 32 chr10 21469131 21469285 -118847480 - MER63A DNA MER1_type -3 207 58 220 226 38 0 chr10 21469339 21469392 -118847373 + MIR SINE MIR 94 148 -114 357 24 0 0 chr10 21470085 21470127 -118846638 + (TA)n Simple_repeat Simple_repeat 2 43 0 1950 174 100 3 chr10 21470846 21471236 -118845529 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr10 21472828 21472850 -118843915 + AT_rich Low_complexity Low_complexity 1 22 0 340 303 139 56 chr10 21474603 21474870 -118841895 + L3b LINE CR1 1202 1490 -93 2036 140 3 16 chr10 21475023 21475338 -118841427 + AluSx SINE Alu 1 311 -1 2045 154 35 35 chr10 21477012 21477211 -118839554 - MER57A LTR ERV1 0 403 205 2274 86 0 3 chr10 21477211 21477525 -118839240 + AluSq SINE Alu 1 313 0 2045 154 35 35 chr10 21477525 21477728 -118839037 - MER57A LTR ERV1 -197 206 1 467 182 6 116 chr10 21478951 21479120 -118837645 + MLT1D LTR MaLR 18 166 -339 1788 147 23 14 chr10 21479120 21479555 -118837210 - MER1A DNA MER1_type 0 533 1 987 211 92 57 chr10 21479555 21479882 -118836883 + MLT1D LTR MaLR 160 498 -7 343 322 50 8 chr10 21479894 21480015 -118836750 + MIR SINE MIR 8 133 -129 284 155 0 17 chr10 21480207 21480265 -118836500 + CT-rich Low_complexity Low_complexity 2 58 0 216 97 0 0 chr10 21480917 21480948 -118835817 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 220 336 40 27 chr10 21481159 21481308 -118835457 + MIR SINE MIR 28 178 -84 2063 111 62 0 chr10 21481405 21481693 -118835072 + AluSc SINE Alu 1 306 -3 5722 177 30 25 chr10 21482524 21484699 -118832066 + L1PA16 LINE L1 3956 6157 -9 21 36 0 0 chr10 21484699 21484727 -118832038 + AT_rich Low_complexity Low_complexity 1 28 0 200 206 0 0 chr10 21484752 21484786 -118831979 + polypyrimidine Low_complexity Low_complexity 3 36 0 22 0 0 0 chr10 21485427 21485449 -118831316 + AT_rich Low_complexity Low_complexity 1 22 0 1475 99 0 5 chr10 21485470 21485662 -118831103 - AluSx SINE Alu -75 237 47 203 314 172 6 chr10 21485766 21485935 -118830830 - L2 LINE L2 -627 2687 2491 24 32 0 0 chr10 21487136 21487167 -118829598 + AT_rich Low_complexity Low_complexity 1 31 0 379 88 0 0 chr10 21487622 21487679 -118829086 - AluJo SINE Alu 0 302 246 984 186 5 42 chr10 21487682 21487875 -118828890 - AluJo SINE Alu -126 186 1 290 305 55 23 chr10 21488091 21488219 -118828546 + MIR SINE MIR 117 248 -14 2154 114 10 0 chr10 21488340 21488630 -118828135 + AluSq SINE Alu 1 293 -20 648 197 87 6 chr10 21488849 21489032 -118827733 + Charlie5 DNA MER1_type 2388 2585 -27 243 325 0 48 chr10 21489202 21489285 -118827480 + L2 LINE L2 3192 3270 -43 476 274 97 37 chr10 21490039 21490360 -118826405 - L1MC4a LINE L1 -308 5813 5542 216 0 0 0 chr10 21491358 21491382 -118825383 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 203 321 36 0 chr10 21491654 21491710 -118825055 - MIR SINE MIR -64 144 87 1324 216 7 28 chr10 21492618 21492905 -118823860 + AluJo SINE Alu 1 281 -31 189 0 0 0 chr10 21492930 21492951 -118823814 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 230 281 0 0 chr10 21493060 21493117 -118823648 + CT-rich Low_complexity Low_complexity 3 59 0 186 43 0 0 chr10 21494875 21494898 -118821867 + (T)n Simple_repeat Simple_repeat 1 23 0 801 116 0 0 chr10 21494927 21495048 -118821717 - AluY SINE Alu -6 305 185 2180 73 0 23 chr10 21495154 21495455 -118821310 + AluY SINE Alu 9 302 -9 811 21 0 0 chr10 21495826 21495920 -118820845 - L1PA4 LINE L1 -379 5776 5683 3051 43 3 0 chr10 21495920 21496291 -118820474 + L1PA4 LINE L1 5779 6153 -2 626 239 38 38 chr10 21496511 21496695 -118820070 + MER63A DNA MER1_type 1 184 -26 351 241 15 83 chr10 21497111 21497244 -118819521 + L2 LINE L2 3122 3245 -27 609 300 14 14 chr10 21497246 21497456 -118819309 + LTR16A LTR ERVL 211 420 -30 383 243 0 23 chr10 21498575 21498748 -118818017 + (TA)n Simple_repeat Simple_repeat 1 169 0 358 229 33 0 chr10 21498762 21498915 -118817850 + (TA)n Simple_repeat Simple_repeat 1 158 0 790 296 102 42 chr10 21500375 21500759 -118816006 + L3 LINE CR1 1143 1553 -24 1936 131 3 3 chr10 21500759 21501056 -118815709 - AluSx SINE Alu -15 297 1 790 296 102 42 chr10 21501056 21501073 -118815692 + L3 LINE CR1 1553 1568 -9 183 218 36 55 chr10 21504140 21504195 -118812570 - L2 LINE L2 0 3272 3219 2143 204 17 0 chr10 21504641 21505053 -118811712 + L1PA15 LINE L1 5746 6164 -1 435 174 0 0 chr10 21505666 21505752 -118811013 + (TA)n Simple_repeat Simple_repeat 1 86 0 241 119 0 0 chr10 21505757 21505799 -118810966 - LTR66 LTR ERVL -175 435 394 198 143 0 0 chr10 21505799 21505834 -118810931 + (TA)n Simple_repeat Simple_repeat 2 36 0 303 293 181 17 chr10 21507111 21507227 -118809538 + L2 LINE L2 3138 3272 0 503 226 51 69 chr10 21507480 21507616 -118809149 - HAL1 LINE L1 -109 2398 2265 2292 60 0 14 chr10 21507616 21507938 -118808827 + AluY SINE Alu 1 318 0 503 226 51 69 chr10 21507938 21508017 -118808748 - HAL1 LINE L1 -242 2265 2186 1944 259 78 56 chr10 21508080 21508209 -118808556 - HAL1 LINE L1 -707 1800 1675 1828 128 4 0 chr10 21508209 21508466 -118808299 + AluSx SINE Alu 45 302 -10 1944 259 78 56 chr10 21508466 21508646 -118808119 - HAL1 LINE L1 -832 1675 1501 2259 107 0 3 chr10 21508646 21508956 -118807809 - AluSg SINE Alu -1 309 1 1944 259 78 56 chr10 21508956 21509626 -118807139 - HAL1 LINE L1 -1006 1501 798 378 250 34 0 chr10 21509698 21509786 -118806979 + MER5A DNA MER1_type 9 99 -90 409 256 15 38 chr10 21509823 21509956 -118806809 - HAL1 LINE L1 -1839 668 539 1677 215 8 32 chr10 21510003 21510375 -118806390 - MLT1A2 LTR MaLR -11 363 1 315 167 106 15 chr10 21510383 21510449 -118806316 - HAL1 LINE L1 -2029 478 407 300 354 27 0 chr10 21510554 21510701 -118806064 - HAL1 LINE L1 -2355 152 2 186 274 118 0 chr10 21511699 21511750 -118805015 + L2 LINE L2 3242 3298 -15 1741 161 25 0 chr10 21511825 21512110 -118804655 - AluSx SINE Alu -15 297 6 854 198 16 21 chr10 21512819 21513006 -118803759 - MLT1A2 LTR MaLR 0 374 189 437 306 0 61 chr10 21513152 21513332 -118803433 - MLT1A2 LTR MaLR -205 169 1 249 53 79 0 chr10 21513785 21513823 -118802942 - MIR SINE MIR -67 141 101 278 279 10 29 chr10 21516162 21516266 -118800499 + MER5A DNA MER1_type 4 105 -84 194 266 0 24 chr10 21517167 21517295 -118799470 + MER5A DNA MER1_type 1 183 -6 214 135 0 0 chr10 21517467 21517504 -118799261 - L2 LINE L2 -1 3312 3276 625 291 43 19 chr10 21518185 21518443 -118798322 + L2 LINE L2 2664 2927 -387 222 37 0 0 chr10 21518527 21518554 -118798211 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 214 191 0 0 chr10 21518981 21519023 -118797742 + A-rich Low_complexity Low_complexity 1 42 0 2253 79 0 22 chr10 21519996 21520311 -118796454 - AluY SINE Alu -3 308 1 2163 114 0 32 chr10 21521224 21521540 -118795225 - AluSx SINE Alu -6 306 1 45 69 0 0 chr10 21522076 21522163 -118794602 + AT_rich Low_complexity Low_complexity 1 87 0 2126 128 0 0 chr10 21522192 21522488 -118794277 - AluSg SINE Alu -14 296 1 2322 92 3 0 chr10 21523405 21523700 -118793065 + AluSp SINE Alu 1 296 -17 237 313 43 39 chr10 21525385 21525517 -118791248 + MIR SINE MIR 7 153 -63 2042 120 3 3 chr10 21525853 21526160 -118790605 - AluSx SINE Alu 0 307 1 24 0 0 0 chr10 21526215 21526239 -118790526 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr10 21526694 21526717 -118790048 + (T)n Simple_repeat Simple_repeat 1 23 0 1547 171 6 84 chr10 21526753 21527087 -118789678 - AluJo SINE Alu -2 310 3 2182 97 3 3 chr10 21527185 21527483 -118789282 - AluSx SINE Alu -14 298 1 2850 191 27 16 chr10 21527595 21528151 -118788614 - MER68 LTR ERV1 0 562 1 214 377 84 31 chr10 21528153 21528344 -118788421 - L2 LINE L2 -111 3161 2961 861 134 22 8 chr10 21528599 21528733 -118788032 + AluJo SINE Alu 1 136 -176 1814 168 0 19 chr10 21528739 21529048 -118787717 + AluJo SINE Alu 1 303 -9 2234 106 48 31 chr10 21529100 21529458 -118787307 - THE1B LTR MaLR 0 364 1 218 323 55 31 chr10 21532314 21532441 -118784324 - MIR SINE MIR -98 164 35 183 42 0 0 chr10 21532711 21532735 -118784030 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 185 276 92 11 chr10 21532771 21532858 -118783907 + MIR3 SINE MIR 104 197 -11 2056 135 3 0 chr10 21534701 21534997 -118781768 - AluSq SINE Alu -14 299 3 372 281 18 26 chr10 21535301 21535415 -118781350 + MER81 DNA DNA 1 113 -1 1354 249 27 31 chr10 21535651 21535869 -118780896 - MER89 LTR ERV1 0 559 342 2118 114 4 0 chr10 21535869 21536171 -118780594 - AluSx SINE Alu 0 304 2 1354 249 27 31 chr10 21536171 21536413 -118780352 - MER89 LTR ERV1 -217 342 1 2460 144 41 5 chr10 21537897 21538308 -118778457 - MSTB LTR MaLR 0 426 1 1737 154 38 0 chr10 21538348 21538640 -118778125 + AluSx SINE Alu 1 303 -9 384 300 138 6 chr10 21540074 21540234 -118776531 - MER5A DNA MER1_type 0 189 9 2109 123 7 3 chr10 21540713 21541014 -118775751 + AluSx SINE Alu 1 302 -10 2169 147 40 8 chr10 21541107 21541460 -118775305 + THE1B LTR MaLR 1 364 0 1814 144 6 31 chr10 21544746 21545066 -118771699 - AluSx SINE Alu 0 312 1 270 116 0 0 chr10 21545609 21545652 -118771113 + (CCTA)n Simple_repeat Simple_repeat 4 46 0 24 32 0 0 chr10 21545739 21545770 -118770995 + AT_rich Low_complexity Low_complexity 1 31 0 1050 90 17 11 chr10 21546607 21546709 -118770056 + (TTCC)n Simple_repeat Simple_repeat 1 281 0 1050 90 17 11 chr10 21546709 21546887 -118769878 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 258 206 0 0 chr10 21547778 21547846 -118768919 + (TG)n Simple_repeat Simple_repeat 1 68 0 198 150 0 0 chr10 21549515 21549555 -118767210 + (GA)n Simple_repeat Simple_repeat 1 40 0 277 269 59 24 chr10 21550339 21550489 -118766276 - Charlie8 DNA MER1_type -2132 285 136 731 154 0 31 chr10 21551437 21551567 -118765198 + FLAM_C SINE Alu 1 126 -7 1563 203 38 38 chr10 21551892 21552262 -118764503 + MLT1B LTR MaLR 1 370 -20 1272 172 60 34 chr10 21552455 21552723 -118764042 - AluJo SINE Alu -1 311 37 222 174 0 0 chr10 21552996 21553042 -118763723 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 111 67 0 chr10 21553622 21553667 -118763098 + T-rich Low_complexity Low_complexity 2 49 0 1139 99 82 11 chr10 21553696 21553878 -118762887 - L1PA8 LINE L1 -2 6170 5976 2309 72 3 7 chr10 21554108 21554436 -118762329 - AluSg SINE Alu 0 310 1 306 275 166 46 chr10 21554653 21554937 -118761828 - L2 LINE L2 0 3313 2996 238 136 62 0 chr10 21555517 21555598 -118761167 + (TA)n Simple_repeat Simple_repeat 2 87 0 1834 156 117 14 chr10 21555802 21556161 -118760604 + MSTD LTR MaLR 1 396 0 198 71 0 0 chr10 21557000 21557028 -118759737 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4832 136 40 36 chr10 21557038 21557708 -118759057 - L1PA16 LINE L1 -9 6157 5480 2143 113 14 0 chr10 21557708 21558001 -118758764 - AluSp SINE Alu -16 297 1 4832 136 40 36 chr10 21558001 21558230 -118758535 - L1PA16 LINE L1 -686 5480 5254 38 22 0 0 chr10 21558308 21558353 -118758412 + AT_rich Low_complexity Low_complexity 1 45 0 220 292 0 15 chr10 21558621 21558686 -118758079 + L2 LINE L2 3180 3243 -70 385 271 221 0 chr10 21558980 21559102 -118757663 + MER5B DNA MER1_type 28 176 -2 433 161 74 19 chr10 21559236 21559398 -118757367 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 443 181 78 0 chr10 21559411 21559577 -118757188 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 1407 196 110 46 chr10 21559637 21560009 -118756756 + MSTD LTR MaLR 1 396 0 604 220 187 0 chr10 21560603 21560753 -118756012 - MER5B DNA MER1_type 0 178 1 30 0 0 0 chr10 21562017 21562047 -118754718 + AT_rich Low_complexity Low_complexity 1 30 0 520 268 49 41 chr10 21562694 21562890 -118753875 + MLT1H LTR MaLR 11 251 -298 1885 145 7 10 chr10 21562890 21563193 -118753572 - MER101 LTR ERV1 0 474 173 1550 176 112 0 chr10 21563695 21564007 -118752758 + MER7A DNA MER2_type 2 346 0 2082 134 3 0 chr10 21564418 21564717 -118752048 + AluSx SINE Alu 1 300 -12 1497 193 40 50 chr10 21565134 21565512 -118751253 + MLT1A2 LTR MaLR 1 374 0 1096 86 0 0 chr10 21566364 21566516 -118750249 - L1PA5 LINE L1 -1 6153 6002 2015 97 31 17 chr10 21566983 21567272 -118749493 + AluSg SINE Alu 18 310 0 232 241 165 13 chr10 21568735 21568814 -118747951 - HAL1b LINE L1 -15 1333 1243 2199 233 53 56 chr10 21568950 21569610 -118747155 + MER72 LTR ERV1 1 658 -64 399 56 19 0 chr10 21569735 21569789 -118746976 + MER72 LTR ERV1 668 722 0 330 306 20 20 chr10 21569965 21570112 -118746653 - HAL1b LINE L1 -538 810 664 1120 237 30 79 chr10 21570661 21571054 -118745711 - MLT1A2 LTR MaLR 0 374 1 207 0 0 0 chr10 21571593 21571616 -118745149 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42 36 0 0 chr10 21572791 21572847 -118743918 + AT_rich Low_complexity Low_complexity 1 56 0 324 70 0 0 chr10 21573098 21573141 -118743624 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 1210 77 0 16 chr10 21573151 21573333 -118743432 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1904 131 4 0 chr10 21573338 21573613 -118743152 - AluSx SINE Alu -36 276 1 386 315 76 20 chr10 21573630 21573827 -118742938 - MLT1K LTR MaLR -190 398 191 1842 135 4 0 chr10 21574208 21574468 -118742297 - AluSx SINE Alu -45 267 7 22 35 0 0 chr10 21576497 21576526 -118740239 + AT_rich Low_complexity Low_complexity 1 29 0 227 336 39 55 chr10 21576534 21576662 -118740103 + MIR SINE MIR 40 165 -97 492 298 36 18 chr10 21576704 21576872 -118739893 - MIR SINE MIR -48 214 44 765 226 62 16 chr10 21577693 21577936 -118738829 - L1MCc LINE L1 -6133 290 37 8046 162 12 34 chr10 21578138 21580399 -118736366 + L1PA14 LINE L1 3913 6154 -7 432 0 0 0 chr10 21580399 21580447 -118736318 + (TA)n Simple_repeat Simple_repeat 2 49 0 631 240 56 34 chr10 21580467 21580700 -118736065 - Charlie7 DNA MER1_type -1939 673 436 521 232 10 0 chr10 21580708 21580807 -118735958 - MER5A DNA MER1_type -80 109 10 928 187 42 0 chr10 21580815 21580981 -118735784 - MER58B DNA MER1_type 0 341 169 291 114 0 0 chr10 21581726 21581770 -118734995 + (A)n Simple_repeat Simple_repeat 1 44 0 192 239 88 80 chr10 21582805 21582918 -118733847 + MIR SINE MIR 108 221 -41 740 235 157 16 chr10 21583001 21583320 -118733445 - MER31A LTR ERV1 -18 467 104 457 231 12 0 chr10 21583400 21583537 -118733228 + (TGGA)n Simple_repeat Simple_repeat 1 135 -366 2853 24 0 0 chr10 21583537 21583868 -118732897 + L1PA4 LINE L1 5823 6153 -2 457 231 12 0 chr10 21583868 21583895 -118732870 + (TGGA)n Simple_repeat Simple_repeat 135 501 0 228 304 188 9 chr10 21584992 21585104 -118731661 + MIR SINE MIR 6 137 -125 21 0 0 0 chr10 21586995 21587016 -118729749 + AT_rich Low_complexity Low_complexity 1 21 0 946 112 20 0 chr10 21587143 21587295 -118729470 - L1MA4A LINE L1 -4 6299 6145 767 302 34 11 chr10 21587301 21587536 -118729229 + MIR SINE MIR 1 230 -32 326 230 296 0 chr10 21587999 21588134 -118728631 + MER5A DNA MER1_type 9 183 -6 1786 141 41 3 chr10 21589034 21589325 -118727440 - AluJo SINE Alu -10 302 1 198 0 0 0 chr10 21589492 21589514 -118727251 + (A)n Simple_repeat Simple_repeat 1 22 0 192 374 12 24 chr10 21589893 21589976 -118726789 + MIR SINE MIR 11 92 -170 2494 245 23 15 chr10 21590002 21590667 -118726098 - L1MC4a LINE L1 -1 7807 7138 322 269 162 107 chr10 21591024 21591147 -118725618 - MIR SINE MIR -12 250 108 2156 104 0 10 chr10 21591147 21591463 -118725302 + AluSc SINE Alu 1 309 0 322 269 162 107 chr10 21591463 21591555 -118725210 - MIR SINE MIR -154 108 23 24 67 0 0 chr10 21591872 21591917 -118724848 + AT_rich Low_complexity Low_complexity 1 45 0 2244 83 0 0 chr10 21593219 21593497 -118723268 - AluY SINE Alu -7 304 27 184 324 20 74 chr10 21593658 21593806 -118722959 + L2 LINE L2 2375 2514 -800 631 303 29 61 chr10 21593824 21593872 -118722893 + LTR16C LTR ERVL 224 272 -219 190 56 56 0 chr10 21593872 21593908 -118722857 + T-rich Low_complexity Low_complexity 3 40 0 631 303 29 61 chr10 21593908 21594136 -118722629 + LTR16C LTR ERVL 272 491 0 246 350 89 32 chr10 21594174 21594420 -118722345 - L2 LINE L2 -337 2977 2718 3402 134 31 8 chr10 21594435 21594949 -118721816 - MER1A DNA MER1_type 0 529 4 377 21 0 0 chr10 21595993 21596040 -118720725 + MADE1 DNA Mariner 1 47 -33 28 0 0 0 chr10 21596136 21596164 -118720601 + AT_rich Low_complexity Low_complexity 1 28 0 2217 96 3 7 chr10 21596407 21596708 -118720057 + AluSq SINE Alu 1 300 -13 301 136 30 0 chr10 21597607 21597673 -118719092 + (TA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 0 chr10 21597788 21597810 -118718955 + AT_rich Low_complexity Low_complexity 1 22 0 1575 165 38 10 chr10 21598387 21598678 -118718087 + AluJo SINE Alu 4 302 -10 1092 172 6 0 chr10 21598684 21598864 -118717901 + FRAM SINE Alu 1 176 0 2548 93 34 8 chr10 21600347 21600702 -118716063 + THE1B LTR MaLR 1 364 0 1757 130 6 71 chr10 21601069 21601392 -118715373 + AluSp SINE Alu 2 303 -10 1115 39 22 28 chr10 21601395 21601576 -118715189 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1913 163 0 7 chr10 21604193 21604493 -118712272 - AluJo SINE Alu -14 298 1 569 298 87 14 chr10 21605314 21605532 -118711233 + MIR SINE MIR 16 249 -13 246 139 0 0 chr10 21606813 21606856 -118709909 - L1MB3 LINE L1 -3 6180 6138 235 143 18 18 chr10 21606906 21606962 -118709803 + CT-rich Low_complexity Low_complexity 2 57 0 1187 198 0 22 chr10 21607178 21607405 -118709360 + AluJo SINE Alu 79 300 -12 28 71 0 0 chr10 21608027 21608083 -118708682 + AT_rich Low_complexity Low_complexity 1 56 0 5970 66 88 0 chr10 21608137 21608968 -118707797 + L1PA8 LINE L1 5269 6172 0 316 234 81 32 chr10 21608972 21609096 -118707669 + L1ME LINE L1 5204 5333 -813 481 276 35 7 chr10 21609109 21609254 -118707511 + L1MCa LINE L1 140 288 -6276 1846 171 42 35 chr10 21609255 21609783 -118706982 - MLT2A2 LTR ERVL 0 554 18 1208 263 75 25 chr10 21609787 21610225 -118706540 + L1MCa LINE L1 106 565 -5480 563 205 141 46 chr10 21610386 21610649 -118706116 + L1MCa LINE L1 1289 1576 -4988 1234 164 19 157 chr10 21610698 21610763 -118706002 + L1MC3 LINE L1 7413 7485 -300 2113 110 3 28 chr10 21610763 21611080 -118705685 + AluSc SINE Alu 1 309 0 1234 164 19 157 chr10 21611080 21611447 -118705318 + L1MC3 LINE L1 7485 7785 0 371 295 24 43 chr10 21611439 21611646 -118705119 + L1ME LINE L1 5346 5548 -2260 * 312 164 25 118 chr10 21611756 21611884 -118704881 + L1ME LINE L1 5720 5844 -277 236 51 0 51 chr10 21611938 21611977 -118704788 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2515 47 0 7 chr10 21612198 21612499 -118704266 + AluY SINE Alu 1 299 -12 1641 175 14 7 chr10 21615182 21615328 -118701437 - AluJo SINE Alu -30 282 132 254 29 29 0 chr10 21615328 21615363 -118701402 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 1641 175 14 7 chr10 21615363 21615496 -118701269 - AluJo SINE Alu -180 132 1 506 316 138 0 chr10 21617641 21617859 -118698906 + MIR SINE MIR 15 262 0 414 0 0 0 chr10 21618174 21618220 -118698545 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 332 102 34 chr10 21618289 21618524 -118698241 - L2 LINE L2 -217 3055 2805 230 222 0 0 chr10 21621419 21621464 -118695301 + L2 LINE L2 3262 3306 -7 1519 255 75 27 chr10 21621610 21622092 -118694673 + MLT1D LTR MaLR 1 505 0 1538 205 7 3 chr10 21622694 21622977 -118693788 - AluSx SINE Alu -28 284 1 214 174 43 0 chr10 21623342 21623388 -118693377 - MIR SINE MIR -139 123 76 192 152 0 0 chr10 21623700 21623733 -118693032 + CT-rich Low_complexity Low_complexity 5 37 0 181 107 0 0 chr10 21623897 21623925 -118692840 - L2 LINE L2 -1 3271 3244 875 175 88 58 chr10 21624002 21624310 -118692455 - MER33 DNA MER1_type -7 317 1 279 358 30 0 chr10 21624712 21624846 -118691919 - L2 LINE L2 -563 2751 2614 526 188 78 13 chr10 21624890 21625044 -118691721 + MER103 DNA DNA 3 166 0 212 338 15 15 chr10 21625350 21625486 -118691279 + GA-rich Low_complexity Low_complexity 5 140 0 22 0 0 0 chr10 21626831 21626853 -118689912 + AT_rich Low_complexity Low_complexity 1 22 0 191 150 50 20 chr10 21626888 21626988 -118689777 + (TTATA)n Simple_repeat Simple_repeat 3 105 0 1497 212 85 21 chr10 21627095 21627347 -118689418 - MLT1D LTR MaLR -17 488 195 366 80 0 0 chr10 21627347 21627397 -118689368 + (TG)n Simple_repeat Simple_repeat 2 51 0 1497 212 85 21 chr10 21627397 21627578 -118689187 - MLT1D LTR MaLR -310 195 27 28 29 0 0 chr10 21628078 21628113 -118688652 + AT_rich Low_complexity Low_complexity 1 35 0 364 241 54 0 chr10 21628188 21628300 -118688465 - L1ME4a LINE L1 -32 6089 5972 22 0 0 0 chr10 21629886 21629908 -118686857 + AT_rich Low_complexity Low_complexity 1 22 0 2033 119 3 20 chr10 21630800 21631103 -118685662 - AluSx SINE Alu -12 300 3 1611 295 71 12 chr10 21631529 21632118 -118684647 - L2 LINE L2 -767 2547 1924 611 201 103 58 chr10 21632118 21632342 -118684423 - ORSL DNA AcHobo 0 275 42 383 263 55 89 chr10 21632358 21632594 -118684171 - L2 LINE L2 -1384 1930 1703 198 0 0 0 chr10 21632596 21632618 -118684147 + (GA)n Simple_repeat Simple_repeat 1 22 0 2348 90 6 3 chr10 21632636 21632947 -118683818 - AluSx SINE Alu 0 312 1 513 338 26 22 chr10 21632989 21633220 -118683545 - L2 LINE L2 -1823 1491 1260 21 0 0 0 chr10 21633281 21633302 -118683463 + AT_rich Low_complexity Low_complexity 1 21 0 2236 104 3 0 chr10 21633775 21634073 -118682692 + AluSc SINE Alu 1 299 -10 192 317 109 0 chr10 21634803 21634904 -118681861 + MIR SINE MIR 36 147 -115 254 351 8 30 chr10 21635607 21635741 -118681024 + L2 LINE L2 2889 3019 -253 351 59 0 88 chr10 21636013 21636115 -118680650 + (TA)n Simple_repeat Simple_repeat 2 94 0 207 371 62 10 chr10 21636252 21636349 -118680416 + L2 LINE L2 3121 3222 -50 24 0 0 0 chr10 21636923 21636947 -118679818 + AT_rich Low_complexity Low_complexity 1 24 0 278 250 131 0 chr10 21637288 21637372 -118679393 - MER103 DNA DNA -10 156 62 229 341 87 16 chr10 21640069 21640195 -118676570 - L2 LINE L2 -10 3262 3128 1329 205 15 111 chr10 21640860 21641265 -118675500 + MLT1A2 LTR MaLR 9 374 0 264 303 87 46 chr10 21642413 21642631 -118674134 + L2 LINE L2 2479 2705 -609 1971 157 7 0 chr10 21642845 21643151 -118673614 + AluSx SINE Alu 1 308 -4 191 378 20 26 chr10 21643153 21643304 -118673461 + L2 LINE L2 2707 2856 -458 234 343 0 0 chr10 21643321 21643394 -118673371 + L2 LINE L2 3228 3300 -13 234 312 112 114 chr10 21643418 21643848 -118672917 - L2 LINE L2 -40 3232 2804 29 60 0 0 chr10 21644713 21644763 -118672002 + AT_rich Low_complexity Low_complexity 1 50 0 428 271 112 38 chr10 21645962 21646382 -118670383 + L1M4 LINE L1 4154 4604 -1542 203 256 0 0 chr10 21646397 21646440 -118670325 + (TG)n Simple_repeat Simple_repeat 2 44 0 268 261 0 0 chr10 21647038 21647103 -118669662 + (TA)n Simple_repeat Simple_repeat 1 65 0 327 25 0 0 chr10 21647107 21647147 -118669618 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 333 92 31 chr10 21647720 21647915 -118668850 - MIR SINE MIR -10 252 46 2476 82 125 5 chr10 21648199 21648599 -118668166 - LTR7 LTR ERV1 -2 448 1 2323 98 50 13 chr10 21648599 21648977 -118667788 - HERVH LTR ERV1 0 7713 7322 1386 109 23 14 chr10 21648975 21649196 -118667569 - HERVH LTR ERV1 -1894 5819 5597 * 4404 138 1 1 chr10 21649193 21649854 -118666911 - HERVH LTR ERV1 -2564 5149 4489 3298 114 12 6 chr10 21649857 21650356 -118666409 - HERVH LTR ERV1 -3720 3993 3492 902 142 20 0 chr10 21650346 21650494 -118666271 - HERVH LTR ERV1 -4423 3290 3140 * 20103 93 11 28 chr10 21650488 21653526 -118663239 - HERVH LTR ERV1 -4726 2987 1 2424 92 125 5 chr10 21653528 21653928 -118662837 - LTR7 LTR ERV1 -2 448 1 246 336 52 0 chr10 21654745 21654861 -118661904 - MIR SINE MIR -68 194 73 35 24 0 0 chr10 21654927 21654969 -118661796 + AT_rich Low_complexity Low_complexity 1 42 0 183 217 12 24 chr10 21654974 21655057 -118661708 + (CATA)n Simple_repeat Simple_repeat 2 83 0 504 146 68 3 chr10 21655103 21655401 -118661364 + (TA)n Simple_repeat Simple_repeat 1 317 0 663 161 61 8 chr10 21655459 21655857 -118660908 + (TA)n Simple_repeat Simple_repeat 1 419 0 695 197 0 0 chr10 21656597 21656719 -118660046 + FLAM_A SINE Alu 4 125 -8 11850 218 50 38 chr10 21657238 21660290 -118656475 - L1MA9 LINE L1 0 7333 4573 2320 111 0 0 chr10 21660290 21660588 -118656177 - AluSq SINE Alu -15 298 1 11850 218 50 38 chr10 21660588 21663773 -118652992 - L1MA9 LINE L1 -2760 4573 1428 1325 206 43 20 chr10 21663773 21664075 -118652690 - L1MA9 LINE L1 -6726 365 2 460 237 72 29 chr10 21666143 21666282 -118650483 - MIR SINE MIR -46 216 72 3079 172 20 25 chr10 21666565 21667169 -118649596 + MER6A DNA MER2_type 2 602 -3 198 326 54 62 chr10 21667389 21667518 -118649247 + MIR SINE MIR 75 202 -60 2167 136 0 0 chr10 21667520 21667821 -118648944 + AluSx SINE Alu 1 301 -11 4081 55 0 0 chr10 21668395 21668906 -118647859 + L1PA7 LINE L1 5644 6154 0 2350 68 3 0 chr10 21668908 21669202 -118647563 + AluY SINE Alu 1 328 -63 207 161 0 0 chr10 21669202 21669233 -118647532 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2350 68 3 0 chr10 21669233 21669298 -118647467 + AluY SINE Alu 328 391 0 450 0 0 0 chr10 21669299 21669349 -118647416 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 183 184 0 0 chr10 21669798 21669836 -118646929 + (TAG)n Simple_repeat Simple_repeat 3 40 0 21 57 0 0 chr10 21669915 21669950 -118646815 + AT_rich Low_complexity Low_complexity 1 35 0 235 304 65 70 chr10 21672215 21672445 -118644320 + MIR SINE MIR 7 235 -27 906 129 0 80 chr10 21672525 21672726 -118644039 - AluSq SINE Alu -32 281 97 21 0 0 0 chr10 21673193 21673214 -118643551 + AT_rich Low_complexity Low_complexity 1 21 0 198 306 20 0 chr10 21673815 21673864 -118642901 - L3 LINE CR1 -106 1471 1422 552 292 0 0 chr10 21673976 21674106 -118642659 + MER94 DNA DNA 1 130 -4 182 289 105 13 chr10 21674675 21674751 -118642014 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 21674945 21675087 -118641678 + MIR SINE MIR 109 252 -10 7741 57 10 2 chr10 21675941 21676973 -118639792 - L1P LINE L1 -3531 2615 1576 354 191 8 76 chr10 21677441 21677572 -118639193 - L1 LINE L1 -1174 4972 4851 3607 100 0 24 chr10 21677579 21678128 -118638637 + L1PB1 LINE L1 5615 6150 -1 644 66 33 0 chr10 21678401 21678492 -118638273 + THE1A LTR MaLR 3 96 -259 226 301 41 57 chr10 21678690 21678813 -118637952 - L1MC/D LINE L1 -2154 5654 5534 336 359 36 48 chr10 21678846 21679094 -118637671 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 21679813 21679967 -118636798 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 21680024 21680072 -118636693 + AT_rich Low_complexity Low_complexity 1 48 0 184 337 116 0 chr10 21680209 21680295 -118636470 + MIR SINE MIR 40 135 -73 379 113 0 70 chr10 21682525 21682596 -118634169 + HERVH LTR ERV1 7648 7713 0 1651 98 107 87 chr10 21682596 21683035 -118633730 + LTR7 LTR ERV1 1 448 -2 371 333 92 31 chr10 21683319 21683514 -118633251 + MIR SINE MIR 46 252 -10 381 22 0 0 chr10 21684087 21684133 -118632632 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 261 0 0 chr10 21684137 21684202 -118632563 + (TA)n Simple_repeat Simple_repeat 2 66 0 1840 148 0 63 chr10 21685113 21685431 -118631334 - AluJb SINE Alu -14 298 1 834 237 48 19 chr10 21686475 21686682 -118630083 + MER58A DNA MER1_type 10 222 -2 4882 134 20 27 chr10 21687294 21688260 -118628505 + L1MA5A LINE L1 5117 6080 -217 206 179 75 15 chr10 21688265 21688332 -118628433 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 1182 106 26 5 chr10 21688361 21688550 -118628215 + L1MA5A LINE L1 6099 6291 -6 2255 82 0 13 chr10 21690416 21690721 -118626044 - AluY SINE Alu -8 303 3 180 324 73 0 chr10 21690891 21690959 -118625806 - MIR SINE MIR -60 148 76 336 149 45 0 chr10 21691166 21691233 -118625532 + T-rich Low_complexity Low_complexity 1 70 0 778 144 35 6 chr10 21691233 21691407 -118625358 + CT-rich Low_complexity Low_complexity 1 179 0 237 178 44 0 chr10 21693177 21693222 -118623543 - MIR SINE MIR -59 149 103 338 154 69 25 chr10 21693222 21693314 -118623451 + L1MA7 LINE L1 6020 6115 -197 915 185 28 5 chr10 21693339 21693550 -118623215 + L1MA7 LINE L1 6064 6279 -12 266 356 11 0 chr10 21693580 21693670 -118623095 - MIR SINE MIR -157 105 15 303 284 142 26 chr10 21694021 21694176 -118622589 - MER5A DNA MER1_type -16 173 1 336 24 0 0 chr10 21694237 21694278 -118622487 + (CA)n Simple_repeat Simple_repeat 2 42 0 1951 149 39 33 chr10 21695556 21695918 -118620847 - THE1B LTR MaLR 0 364 1 3890 178 61 92 chr10 21696121 21697427 -118619338 - MER11A LTR ERVK 0 1266 1 1560 137 26 26 chr10 21697506 21697777 -118618988 - MER44D DNA MER2_type -32 577 37 2971 124 4 61 chr10 21699753 21699907 -118616858 - L1PA13 LINE L1 -1 6162 6001 2409 89 0 0 chr10 21699907 21700220 -118616545 - AluSp SINE Alu 0 313 1 2971 124 4 61 chr10 21700220 21700607 -118616158 - L1PA13 LINE L1 -162 6001 5652 1388 187 41 29 chr10 21700611 21700926 -118615839 - L1MC1 LINE L1 -6 6327 6009 308 96 0 0 chr10 21700929 21700981 -118615784 - L1PB1 LINE L1 -1 6150 6099 364 136 17 0 chr10 21700981 21701040 -118615725 - L1PA13 LINE L1 -498 5663 5604 * 735 160 3 1 chr10 21701036 21701176 -118615589 + L1PA13 LINE L1 5497 5637 -514 187 298 35 35 chr10 21702038 21702095 -118614670 + L2 LINE L2 3203 3259 -13 341 332 26 4 chr10 21702121 21702256 -118614509 - MIR SINE MIR -62 146 17 339 279 60 69 chr10 21703267 21703575 -118613190 - L1M4 LINE L1 -5188 1446 996 482 259 80 12 chr10 21704285 21704447 -118612318 - MIR SINE MIR -1 261 89 186 150 0 0 chr10 21704601 21704641 -118612124 + (CATAT)n Simple_repeat Simple_repeat 3 42 0 2217 98 3 0 chr10 21704964 21705260 -118611505 + AluSx SINE Alu 1 297 -15 27 29 0 0 chr10 21706633 21706667 -118610098 + AT_rich Low_complexity Low_complexity 1 34 0 1114 145 0 0 chr10 21706668 21706827 -118609938 - AluSg/x SINE Alu -25 287 129 853 156 0 0 chr10 21707697 21707838 -118608927 - FRAM SINE Alu -15 161 21 904 174 72 62 chr10 21709242 21709474 -118607291 + AluJb SINE Alu 86 319 0 250 295 95 9 chr10 21709945 21710050 -118606715 - MER91C DNA MER1_type 0 140 27 994 329 99 24 chr10 21710068 21710920 -118605845 + L2 LINE L2 2419 3313 0 190 370 0 0 chr10 21711365 21711419 -118605346 - L3 LINE CR1 -124 1453 1400 1075 118 0 13 chr10 21711620 21711772 -118604993 + FRAM SINE Alu 2 151 -25 577 246 106 10 chr10 21711878 21712085 -118604680 - MLT1H LTR MaLR 0 549 323 27 0 0 0 chr10 21712092 21712119 -118604646 + AT_rich Low_complexity Low_complexity 1 27 0 1938 133 34 0 chr10 21712526 21712820 -118603945 + AluSp SINE Alu 1 304 -9 270 0 0 0 chr10 21712820 21712850 -118603915 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 832 73 24 0 chr10 21712848 21712972 -118603793 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 1702 108 88 57 chr10 21713558 21713854 -118602911 + AluSx SINE Alu 1 305 -7 201 74 0 0 chr10 21714176 21714203 -118602562 + (TATTG)n Simple_repeat Simple_repeat 3 29 0 1768 180 0 22 chr10 21715582 21715899 -118600866 - AluJb SINE Alu -2 310 1 2558 38 0 3 chr10 21716055 21716369 -118600396 - L1PA2 LINE L1 -2 6153 5841 224 336 103 20 chr10 21719027 21719173 -118597592 - L3b LINE CR1 -166 1417 1260 28 0 0 0 chr10 21719414 21719442 -118597323 + AT_rich Low_complexity Low_complexity 1 28 0 261 319 106 16 chr10 21720304 21720921 -118595844 - L1ME4a LINE L1 -6 6115 5425 794 101 0 106 chr10 21721336 21721563 -118595202 - L1PA8 LINE L1 -77 6095 5893 1106 290 36 28 chr10 21721564 21721954 -118594811 - L2 LINE L2 -797 2517 2125 47 33 0 0 chr10 21722938 21722999 -118593766 + AT_rich Low_complexity Low_complexity 1 61 0 2559 73 0 0 chr10 21723440 21723783 -118592982 + L1PA8 LINE L1 5830 6172 0 21 36 0 0 chr10 21724783 21724811 -118591954 + AT_rich Low_complexity Low_complexity 1 28 0 3534 131 4 4 chr10 21725013 21725572 -118591193 - L1PA13 LINE L1 0 6163 5605 1095 136 24 15 chr10 21725951 21726157 -118590608 - L1MA5 LINE L1 -2 6298 6091 26 64 0 0 chr10 21726721 21726768 -118589997 + AT_rich Low_complexity Low_complexity 1 47 0 1188 162 24 0 chr10 21726790 21727000 -118589765 - L1MA5 LINE L1 -222 6078 5864 321 303 59 34 chr10 21727034 21727153 -118589612 - MER5A DNA MER1_type -45 144 23 246 226 0 0 chr10 21728070 21728132 -118588633 - L1MC4 LINE L1 -1328 6714 6653 234 191 0 0 chr10 21728139 21728186 -118588579 + (TA)n Simple_repeat Simple_repeat 2 48 0 1173 15 0 0 chr10 21729066 21729199 -118587566 + L1PA5 LINE L1 6007 6139 -15 192 40 0 0 chr10 21729199 21729224 -118587541 + (TA)n Simple_repeat Simple_repeat 1 25 0 345 54 0 5 chr10 21730201 21730259 -118586506 - L1PA4 LINE L1 -145 5986 5937 1451 18 0 0 chr10 21730259 21730424 -118586341 + L1PA4 LINE L1 5987 6155 0 407 298 18 89 chr10 21730524 21730749 -118586016 - MIR SINE MIR -1 261 53 349 178 14 27 chr10 21731801 21731874 -118584891 + MER58B DNA MER1_type 262 333 -8 351 0 0 0 chr10 21732795 21732834 -118583931 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 21733231 21733252 -118583513 + AT_rich Low_complexity Low_complexity 1 21 0 1383 12 0 6 chr10 21733252 21733415 -118583350 - L1PA5 LINE L1 -12 6142 5981 271 276 107 86 chr10 21735036 21735279 -118581486 - MIR SINE MIR -3 259 12 194 0 39 0 chr10 21735956 21735982 -118580783 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2078 101 0 7 chr10 21735984 21736260 -118580505 - AluSc SINE Alu -35 274 1 969 127 0 0 chr10 21736260 21736402 -118580363 - AluSg/x SINE Alu -9 303 162 353 21 0 0 chr10 21737062 21737110 -118579655 - L1MA3 LINE L1 0 6305 6258 442 271 31 0 chr10 21737504 21737633 -118579132 - L1M4 LINE L1 -2022 4124 3992 235 288 133 26 chr10 21737784 21738086 -118578679 + L1M4 LINE L1 3884 4217 -1929 2077 126 3 0 chr10 21739430 21739724 -118577041 - AluSx SINE Alu -16 296 2 738 258 30 0 chr10 21739862 21740060 -118576705 + MER3 DNA MER1_type 5 208 -1 301 226 0 0 chr10 21740018 21740080 -118576685 - MER3 DNA MER1_type -119 90 29 * 43 0 0 0 chr10 21740080 21740123 -118576642 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr10 21740199 21740250 -118576515 + AT_rich Low_complexity Low_complexity 1 51 0 570 144 0 0 chr10 21741063 21741153 -118575612 + AluJ/FLAM SINE Alu 1 90 -222 1022 161 10 10 chr10 21741153 21741345 -118575420 + L1PB4 LINE L1 5965 6156 0 505 87 0 0 chr10 21741352 21741421 -118575344 - MER39B LTR ERV1 -584 69 1 183 80 0 0 chr10 21741460 21741485 -118575280 + (A)n Simple_repeat Simple_repeat 1 25 0 826 93 60 7 chr10 21741724 21741874 -118574891 - L1MA4A LINE L1 0 6303 6146 1603 45 0 0 chr10 21743841 21744039 -118572726 + L1PA5 LINE L1 5954 6151 -3 196 367 22 0 chr10 21744094 21744184 -118572581 - L3 LINE CR1 -78 1499 1408 794 286 33 4 chr10 21744399 21744640 -118572125 - MIR SINE MIR -5 257 10 852 172 0 28 chr10 21744642 21744787 -118571978 + AluJo SINE Alu 7 147 -165 1591 179 28 10 chr10 21744787 21745077 -118571688 + AluJo SINE Alu 5 299 -13 1054 168 79 5 chr10 21745487 21745627 -118571138 - L1MA9 LINE L1 -4 6308 6145 228 35 0 0 chr10 21745627 21745656 -118571109 + (TG)n Simple_repeat Simple_repeat 2 30 0 1054 168 79 5 chr10 21745656 21745729 -118571036 - L1MA9 LINE L1 -167 6145 6079 42 57 0 0 chr10 21746647 21746717 -118570048 + AT_rich Low_complexity Low_complexity 1 70 0 1215 184 125 29 chr10 21746725 21746997 -118569768 + AluJo SINE Alu 4 301 -11 367 245 39 29 chr10 21747605 21747707 -118569058 - L2 LINE L2 -18 3295 3193 313 324 48 9 chr10 21748510 21748615 -118568150 + L2 LINE L2 3166 3274 -39 416 223 11 21 chr10 21748680 21748774 -118567991 + MER81 DNA DNA 22 114 0 259 369 8 16 chr10 21749044 21749166 -118567599 - MIR SINE MIR -65 143 23 467 254 60 40 chr10 21750152 21750353 -118566412 - L2 LINE L2 -1 3312 3108 423 378 66 33 chr10 21750508 21751129 -118565636 - L2 LINE L2 0 3313 2657 198 71 0 0 chr10 21751129 21751157 -118565608 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 423 378 66 33 chr10 21751157 21751295 -118565470 - L2 LINE L2 -656 2657 2525 270 0 0 0 chr10 21751307 21751337 -118565428 + (TG)n Simple_repeat Simple_repeat 1 30 0 748 259 57 30 chr10 21751347 21751648 -118565117 - L1ME2 LINE L1 -9 6138 5830 2474 205 43 41 chr10 21751811 21752372 -118564393 - MER77 LTR ERV1 -43 562 1 206 61 0 30 chr10 21752403 21752436 -118564329 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 263 302 22 58 chr10 21753117 21753256 -118563509 - MIR SINE MIR -21 241 108 401 297 94 42 chr10 21754140 21754715 -118562050 - L1ME2 LINE L1 -914 5215 4611 290 309 67 24 chr10 21754788 21754998 -118561767 - L1ME2 LINE L1 -3283 2846 2628 430 295 50 50 chr10 21755027 21755444 -118561321 - L1ME2 LINE L1 -4969 1150 734 472 424 118 18 chr10 21756044 21757155 -118559610 - L2 LINE L2 -955 2359 1138 189 94 0 0 chr10 21757176 21757208 -118559557 + (A)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 21758674 21758702 -118558063 + (T)n Simple_repeat Simple_repeat 1 28 0 200 145 14 43 chr10 21761539 21761608 -118555157 + CT-rich Low_complexity Low_complexity 2 68 0 365 292 25 17 chr10 21761731 21761851 -118554914 - L2 LINE L2 0 3313 3193 2415 92 0 3 chr10 21761916 21762220 -118554545 - AluSq SINE Alu -10 303 1 300 282 26 8 chr10 21763026 21763143 -118553622 - L1MA9 LINE L1 -38 6274 6156 818 156 0 15 chr10 21763784 21763919 -118552846 + FLAM_A SINE Alu 1 133 0 217 225 12 12 chr10 21764053 21764133 -118552632 + GA-rich Low_complexity Low_complexity 2 81 0 680 300 81 9 chr10 21764143 21764366 -118552399 - MIR SINE MIR -17 245 7 2248 91 3 3 chr10 21764390 21764686 -118552079 - AluSx SINE Alu -12 300 5 2240 120 3 0 chr10 21765051 21765352 -118551413 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 21765905 21765926 -118550839 + AT_rich Low_complexity Low_complexity 1 21 0 191 211 0 0 chr10 21766739 21766777 -118549988 - MER5B DNA MER1_type -2 176 139 340 330 19 0 chr10 21766820 21766923 -118549842 + MER5B DNA MER1_type 51 155 -23 308 321 0 47 chr10 21767013 21767119 -118549646 - MER5A DNA MER1_type -85 104 4 758 89 0 0 chr10 21767387 21767488 -118549277 - MER30 DNA MER1_type -129 101 1 313 182 26 39 chr10 21767551 21767628 -118549137 + MER116 DNA Mariner 5 80 0 304 368 68 76 chr10 21768215 21768625 -118548140 - L2 LINE L2 -1 3271 2865 629 345 79 32 chr10 21768699 21769356 -118547409 - L2 LINE L2 -478 2836 2149 933 107 0 8 chr10 21769362 21769493 -118547272 + AluJb SINE Alu 6 135 -177 180 0 0 0 chr10 21770118 21770138 -118546627 + (A)n Simple_repeat Simple_repeat 1 20 0 681 269 18 41 chr10 21770516 21770930 -118545835 + L1ME2 LINE L1 2065 2429 -3786 1771 150 0 72 chr10 21770989 21771323 -118545442 + AluJb SINE Alu 2 311 -1 407 258 56 66 chr10 21771452 21771598 -118545167 + L1ME2 LINE L1 2755 2900 -3315 932 155 37 5 chr10 21771598 21771785 -118544980 + L1MA9 LINE L1 6120 6312 0 407 258 56 66 chr10 21771785 21771836 -118544929 + L1ME2 LINE L1 2900 2950 -3265 206 179 0 15 chr10 21771836 21771903 -118544862 + (TA)n Simple_repeat Simple_repeat 1 66 0 548 224 23 91 chr10 21771907 21772291 -118544474 + L1ME2 LINE L1 2958 3315 -2900 2368 218 67 36 chr10 21772302 21772334 -118544431 + L1ME2 LINE L1 5196 5226 -1007 1529 165 49 14 chr10 21772334 21772619 -118544146 + AluJo SINE Alu 1 295 -17 2368 218 67 36 chr10 21772619 21772983 -118543782 + L1ME2 LINE L1 5226 5577 -656 252 59 0 0 chr10 21772983 21773017 -118543748 + (CA)n Simple_repeat Simple_repeat 1 34 0 2368 218 67 36 chr10 21773017 21773489 -118543276 + L1ME2 LINE L1 5577 6221 -12 937 160 0 6 chr10 21773844 21774000 -118542765 + AluJo SINE Alu 1 155 -157 740 270 15 27 chr10 21774033 21774292 -118542473 - MIR SINE MIR -5 257 2 1742 164 0 32 chr10 21774416 21774727 -118542038 - AluJo SINE Alu -11 301 1 213 121 0 0 chr10 21775256 21775289 -118541476 + (T)n Simple_repeat Simple_repeat 1 33 0 341 301 53 15 chr10 21776113 21776246 -118540519 - MIR SINE MIR -2 260 123 33 56 0 14 chr10 21776797 21776828 -118539937 + AT_rich Low_complexity Low_complexity 1 31 -40 2095 114 0 10 chr10 21776828 21777117 -118539648 + AluSx SINE Alu 1 286 -26 33 56 0 14 chr10 21777117 21777157 -118539608 + AT_rich Low_complexity Low_complexity 31 71 0 529 174 0 31 chr10 21777364 21777462 -118539303 - AluJb SINE Alu -8 304 210 279 122 0 0 chr10 21778810 21778859 -118537906 + (TA)n Simple_repeat Simple_repeat 2 50 0 253 213 13 53 chr10 21778863 21778938 -118537827 + CT-rich Low_complexity Low_complexity 1 72 0 1967 137 0 30 chr10 21779033 21779332 -118537433 + AluSx SINE Alu 1 290 -22 340 255 0 43 chr10 21779335 21779429 -118537336 - L1MC4 LINE L1 -1339 6703 6614 338 310 10 0 chr10 21779343 21779443 -118537322 + L1MC4 LINE L1 6614 6714 -1328 * 1968 131 58 17 chr10 21779994 21780354 -118536411 - THE1C LTR MaLR 0 375 1 3222 127 21 10 chr10 21780599 21781113 -118535652 - L1PA15 LINE L1 -7 6158 5639 180 0 0 0 chr10 21781380 21781400 -118535365 + (A)n Simple_repeat Simple_repeat 1 20 0 1832 168 30 0 chr10 21782174 21782472 -118534293 + AluJo SINE Alu 3 309 -3 357 62 0 0 chr10 21782591 21782639 -118534126 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 226 306 14 0 chr10 21782642 21782714 -118534051 + GA-rich Low_complexity Low_complexity 4 76 0 646 253 6 12 chr10 21783013 21783179 -118533586 - MIR SINE MIR -1 261 97 2071 103 3 7 chr10 21783389 21783680 -118533085 - AluSx SINE Alu -22 290 1 609 304 25 0 chr10 21783834 21783995 -118532770 + MIR SINE MIR 13 177 -85 2222 110 0 22 chr10 21784445 21784763 -118532002 + AluSx SINE Alu 1 311 -1 2214 107 7 0 chr10 21785502 21785800 -118530965 + AluSq SINE Alu 1 300 -13 1933 153 13 0 chr10 21787017 21787318 -118529447 - AluSx SINE Alu -7 305 1 1487 195 3 58 chr10 21787847 21788155 -118528610 + AluJb SINE Alu 6 296 -16 470 284 0 31 chr10 21789001 21789128 -118527637 - MIR3 SINE MIR -4 204 82 251 303 25 33 chr10 21789596 21789718 -118527047 - L1ME4a LINE L1 -46 6075 5955 2221 180 102 7 chr10 21789978 21790439 -118526326 - MLT1D LTR MaLR 0 505 1 299 294 0 0 chr10 21790468 21790553 -118526212 - MER104 DNA Tc2 -77 103 19 2277 110 0 13 chr10 21790651 21790960 -118525805 + AluSx SINE Alu 1 305 -7 694 300 101 0 chr10 21791081 21791318 -118525447 - MIR SINE MIR 0 262 2 185 339 54 31 chr10 21792730 21792860 -118523905 - L2 LINE L2 -1698 1616 1484 995 213 80 3 chr10 21792864 21793165 -118523600 + MER33 DNA MER1_type 1 324 0 429 241 88 58 chr10 21793310 21793447 -118523318 - L2 LINE L2 0 3313 3173 29 28 0 0 chr10 21793685 21793721 -118523044 + AT_rich Low_complexity Low_complexity 1 36 0 2051 134 0 0 chr10 21793751 21794068 -118522697 + AluSx SINE Alu 1 317 0 435 119 0 0 chr10 21795820 21795887 -118520878 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 2126 141 0 0 chr10 21796772 21797084 -118519681 - AluSx SINE Alu 0 312 1 27 29 0 0 chr10 21797216 21797250 -118519515 + AT_rich Low_complexity Low_complexity 1 34 0 457 349 60 13 chr10 21797717 21797949 -118518816 + L3 LINE CR1 1290 1532 -45 251 53 0 0 chr10 21798488 21798526 -118518239 - L1MA3 LINE L1 0 6305 6268 2134 123 0 3 chr10 21798658 21798966 -118517799 - AluSg SINE Alu 0 310 4 2514 61 0 3 chr10 21799394 21799705 -118517060 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 21800078 21800106 -118516659 + AT_rich Low_complexity Low_complexity 1 28 0 4515 205 20 18 chr10 21800738 21802063 -118514702 - L1MA9 LINE L1 -36 6276 4948 2175 99 3 0 chr10 21802241 21802525 -118514240 + AluSp SINE Alu 2 286 -27 2966 174 105 79 chr10 21802605 21803701 -118513064 + L1PA12 LINE L1 1 1801 -5780 5708 101 21 8 chr10 21803702 21805136 -118511629 + L1PA14 LINE L1 4672 6152 -9 22 35 0 0 chr10 21805283 21805312 -118511453 + AT_rich Low_complexity Low_complexity 1 29 0 365 330 93 31 chr10 21805449 21805901 -118510864 + HAL1b LINE L1 128 607 -741 319 348 80 0 chr10 21806592 21806730 -118510035 + MLT1J2 LTR MaLR 255 403 -47 22 35 0 0 chr10 21807126 21807155 -118509610 + AT_rich Low_complexity Low_complexity 1 29 0 221 225 247 22 chr10 21807461 21807550 -118509215 + L2 LINE L2 3202 3310 -3 202 342 18 36 chr10 21807954 21808065 -118508700 - MIR3 SINE MIR -40 168 60 194 0 0 37 chr10 21808423 21808450 -118508315 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 562 242 15 0 chr10 21809787 21809919 -118506846 - MER94 DNA DNA 0 134 1 2014 132 0 0 chr10 21810400 21810680 -118506085 + AluSx SINE Alu 1 280 -32 273 29 0 0 chr10 21810682 21810716 -118506049 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 217 333 29 54 chr10 21811096 21811201 -118505564 - L2 LINE L2 -788 2526 2427 1959 114 82 0 chr10 21811201 21811481 -118505284 - AluSq SINE Alu -10 303 1 217 333 29 54 chr10 21811481 21811579 -118505186 - L2 LINE L2 -887 2427 2328 372 59 0 0 chr10 21811786 21811837 -118504928 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 29 0 0 chr10 21813066 21813100 -118503665 + AT_rich Low_complexity Low_complexity 1 34 0 2352 231 9 6 chr10 21813281 21813805 -118502960 + MER97b DNA MER1_type? 40 565 -488 562 233 28 75 chr10 21813875 21814128 -118502637 + MER97c DNA MER1_type? 850 1090 0 218 175 0 18 chr10 21814192 21814249 -118502516 + (TA)n Simple_repeat Simple_repeat 2 57 0 1580 180 24 21 chr10 21814401 21814519 -118502246 + AluJb SINE Alu 1 117 -195 195 42 0 0 chr10 21814519 21814543 -118502222 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1580 180 24 21 chr10 21814543 21814713 -118502052 + AluJb SINE Alu 117 290 -22 322 171 13 13 chr10 21814716 21814792 -118501973 + GA-rich Low_complexity Low_complexity 1 76 0 343 211 168 12 chr10 21815493 21815654 -118501111 - MER53 DNA DNA -3 186 1 400 244 181 31 chr10 21815929 21816089 -118500676 + MER5A DNA MER1_type 4 187 -2 2155 118 0 0 chr10 21816297 21816585 -118500180 + AluSx SINE Alu 1 288 -24 24 0 0 0 chr10 21816588 21816612 -118500153 + AT_rich Low_complexity Low_complexity 1 24 0 2164 93 4 0 chr10 21817620 21817900 -118498865 + AluSg SINE Alu 24 304 -6 270 276 0 0 chr10 21818168 21818226 -118498539 - MIR SINE MIR -64 144 87 2414 106 26 13 chr10 21818422 21818810 -118497955 - L1MA2 LINE L1 -209 6095 5703 25 0 0 0 chr10 21820014 21820039 -118496726 + AT_rich Low_complexity Low_complexity 1 25 0 186 71 0 0 chr10 21820558 21820586 -118496179 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 29 28 0 0 chr10 21821571 21821607 -118495158 + AT_rich Low_complexity Low_complexity 1 36 0 963 55 78 0 chr10 21823261 21823389 -118493376 - MER85 DNA T2_type 0 139 2 942 189 61 0 chr10 21823559 21823755 -118493010 - MER3 DNA MER1_type -1 208 1 245 305 0 68 chr10 21823908 21824026 -118492739 + MIR SINE MIR 81 190 -72 21 0 0 0 chr10 21824554 21824575 -118492190 + AT_rich Low_complexity Low_complexity 1 21 0 255 291 13 0 chr10 21824972 21825051 -118491714 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 297 0 0 0 chr10 21825073 21825106 -118491659 + (TG)n Simple_repeat Simple_repeat 2 34 0 992 184 0 0 chr10 21825108 21825271 -118491494 + FRAM SINE Alu 1 163 -3 376 247 0 0 chr10 21825276 21825357 -118491408 - MIR3 SINE MIR -41 167 87 259 212 15 45 chr10 21825976 21826042 -118490723 - L2 LINE L2 -15 3298 3235 1710 92 4 0 chr10 21827336 21827563 -118489202 - AluSp SINE Alu -85 228 1 182 250 19 135 chr10 21830896 21831000 -118485765 - L2 LINE L2 -1 3312 3221 218 176 0 39 chr10 21831011 21831062 -118485703 + T-rich Low_complexity Low_complexity 2 50 0 1500 180 55 21 chr10 21831067 21831356 -118485409 - AluJb SINE Alu -13 299 1 264 277 20 40 chr10 21831474 21831575 -118485190 - L2 LINE L2 -188 3084 2986 42458 53 1 4 chr10 21832135 21838296 -118478469 - L1PA4 LINE L1 -8 6147 3 424 329 140 28 chr10 21838328 21839048 -118477717 - L2 LINE L2 -896 2418 1618 319 315 98 94 chr10 21839351 21839627 -118477138 + L2 LINE L2 2996 3272 0 891 248 102 98 chr10 21840135 21840635 -118476130 + MLT1L LTR MaLR 19 520 -95 10881 72 5 13 chr10 21840760 21842181 -118474584 - L1P LINE L1 -4736 1410 1 831 124 0 0 chr10 21842189 21842302 -118474463 - AluSp/q SINE Alu -15 298 186 2922 56 56 11 chr10 21844250 21844627 -118472138 - L1PA10 LINE L1 -4 6164 5771 2174 137 0 0 chr10 21844996 21845295 -118471470 + AluSx SINE Alu 1 299 -13 332 308 69 0 chr10 21845302 21845432 -118471333 + MIR SINE MIR 76 214 -48 23 0 0 0 chr10 21845764 21845787 -118470978 + AT_rich Low_complexity Low_complexity 1 23 0 2497 226 122 14 chr10 21846100 21846820 -118469945 - MER21B LTR ERV1 -52 811 14 1503 196 3 27 chr10 21847082 21847383 -118469382 + AluJb SINE Alu 3 296 -16 194 397 0 0 chr10 21847483 21847556 -118469209 - L2 LINE L2 0 3313 3241 642 301 78 0 chr10 21847581 21847800 -118468965 - MIR SINE MIR -26 236 1 627 270 218 31 chr10 21847830 21848323 -118468442 - L2 LINE L2 -78 3235 2624 3395 132 23 0 chr10 21848366 21848850 -118467915 + MER1A DNA MER1_type 33 527 -2 1852 213 40 9 chr10 21848852 21849280 -118467485 - MER74C LTR ERVL -2 458 18 424 202 29 0 chr10 21849322 21849426 -118467339 - L2 LINE L2 -742 2572 2466 387 231 31 136 chr10 21849594 21849888 -118466877 + L1ME4a LINE L1 5630 5892 -229 249 231 51 13 chr10 21849920 21849998 -118466767 - MIR SINE MIR -2 260 180 746 204 20 7 chr10 21850356 21850508 -118466257 - Tigger2 DNA MER2_type -1 2717 2564 * 1205 134 10 14 chr10 21850505 21850714 -118466051 - Tigger2 DNA MER2_type -2510 208 1 2024 121 10 7 chr10 21851276 21851573 -118465192 + AluSg SINE Alu 1 298 -12 715 227 102 32 chr10 21851723 21851939 -118464826 + MIR SINE MIR 32 262 0 1653 232 178 29 chr10 21851956 21852198 -118464567 - MLT1H LTR MaLR 0 549 344 2810 10 0 0 chr10 21852198 21852501 -118464264 - AluY SINE Alu -8 303 1 1653 232 178 29 chr10 21852501 21852736 -118464029 - MLT1H LTR MaLR -205 344 1 304 319 38 52 chr10 21852738 21852948 -118463817 - L2 LINE L2 -1036 2278 2072 222 344 122 43 chr10 21853669 21853948 -118462817 - L2 LINE L2 -2394 920 620 2214 141 133 13 chr10 21854009 21854406 -118462359 + MER65A LTR ERV1 1 445 0 869 183 0 0 chr10 21854472 21854603 -118462162 + FLAM_A SINE Alu 1 131 -2 261 312 37 9 chr10 21854681 21854790 -118461975 + L1ME LINE L1 5454 5565 -556 1987 154 128 21 chr10 21854946 21855329 -118461436 - MSTA LTR MaLR 0 428 5 5719 129 20 14 chr10 21855329 21856208 -118460557 - MSTA-int LTR MaLR -1 1579 695 1384 142 0 5 chr10 21856192 21856404 -118460361 - MSTA-int LTR MaLR -1367 213 3 * 1730 179 130 41 chr10 21856406 21856797 -118459968 - MSTA LTR MaLR 0 428 3 326 328 61 114 chr10 21857213 21857693 -118459072 - L2 LINE L2 -20 3252 2799 403 246 242 16 chr10 21857772 21858028 -118458737 + L2 LINE L2 3000 3313 0 830 285 73 7 chr10 21858428 21858702 -118458063 - LTR16C LTR ERVL -1 490 199 4449 194 51 6 chr10 21858741 21859565 -118457200 - MER21B LTR ERV1 -2 861 1 2610 207 18 2 chr10 21859810 21860265 -118456500 - MER70A LTR ERVL -10 462 1 1802 193 0 0 chr10 21860280 21860591 -118456174 - AluJb SINE Alu 0 312 2 1984 140 0 7 chr10 21861325 21861632 -118455133 + AluSx SINE Alu 1 305 -7 843 256 122 36 chr10 21861852 21862263 -118454502 + L2 LINE L2 2867 3312 -1 2676 206 19 71 chr10 21862321 21862967 -118453798 + LTR9 LTR ERV1 1 612 0 2153 169 0 55 chr10 21865176 21865595 -118451170 - MER57A LTR ERV1 -5 398 3 498 202 0 19 chr10 21865614 21865718 -118451047 - MER57A-int LTR ERV1 -29 7508 7407 684 218 113 56 chr10 21865718 21866002 -118450763 - LTR54 LTR ERV1 -210 300 1 2842 219 43 93 chr10 21866002 21866958 -118449807 - MER57A-int LTR ERV1 -490 7326 6419 322 154 0 0 chr10 21866959 21867011 -118449754 - MER57A-int LTR ERV1 -1346 6470 6419 * 2153 205 68 14 chr10 21866980 21867448 -118449317 - MER57A-int LTR ERV1 -1251 6286 5825 4833 191 63 77 chr10 21867751 21869310 -118447455 - MER57A-int LTR ERV1 -1720 5817 4281 38 68 0 0 chr10 21869517 21869590 -118447175 + AT_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 21869673 21869701 -118447064 + AT_rich Low_complexity Low_complexity 1 28 0 514 224 0 0 chr10 21869897 21869995 -118446770 - MER57A-int LTR ERV1 -2886 3445 3348 1257 204 23 66 chr10 21870019 21870323 -118446442 - MER57A-int LTR ERV1 -2960 3371 3081 495 173 36 103 chr10 21870316 21870567 -118446198 - MER57A-int LTR ERV1 -3724 1982 1083 * 849 268 70 33 chr10 21870567 21870839 -118445926 - MER34C LTR ERV1 -155 430 149 386 303 35 14 chr10 21870839 21870981 -118445784 - MER57A-int LTR ERV1 -4138 985 841 3401 231 27 38 chr10 21871091 21871929 -118444836 - MER57A-int LTR ERV1 -6708 829 1 2322 179 0 34 chr10 21871929 21872342 -118444423 - MER57A LTR ERV1 0 403 5 425 232 283 15 chr10 21872439 21872637 -118444128 + MIR SINE MIR 7 257 -5 758 202 8 0 chr10 21872827 21872956 -118443809 - FLAM_C SINE Alu -2 131 2 368 296 75 38 chr10 21873150 21873336 -118443429 - MIR SINE MIR 0 262 70 980 238 66 24 chr10 21873337 21873675 -118443090 + MSTD LTR MaLR 1 396 0 6687 235 71 29 chr10 21873677 21875336 -118441429 + MSTD-int LTR MaLR 2 1730 -5 447 204 11 21 chr10 21875345 21875438 -118441327 + MSTD LTR MaLR 5 96 -332 985 166 24 6 chr10 21875455 21875624 -118441141 + MSTD LTR MaLR 225 396 0 1205 260 28 69 chr10 21875816 21876208 -118440557 + MER72 LTR ERV1 1 376 -346 2195 199 54 14 chr10 21876341 21876767 -118439998 + MER72 LTR ERV1 279 721 -1 207 0 0 0 chr10 21877425 21877448 -118439317 + (A)n Simple_repeat Simple_repeat 1 23 0 3064 189 14 0 chr10 21877954 21878467 -118438298 + MLT2B1 LTR ERVL 1 520 0 234 260 138 55 chr10 21878570 21878751 -118438014 - L2 LINE L2 0 3313 3118 455 267 77 72 chr10 21879211 21879406 -118437359 + MIR SINE MIR 53 248 -14 39 0 0 0 chr10 21879426 21879465 -118437300 + AT_rich Low_complexity Low_complexity 1 39 0 39081 47 1 3 chr10 21879470 21884225 -118432540 - L1P LINE L1 -1398 4748 4 1776 161 0 33 chr10 21884851 21885184 -118431581 + AluJb SINE Alu 1 323 0 1523 173 106 3 chr10 21886866 21887149 -118429616 + AluJo SINE Alu 1 312 0 1458 242 35 45 chr10 21887916 21888342 -118428423 + LTR9 LTR ERV1 191 612 0 2229 92 0 7 chr10 21888375 21888667 -118428098 + AluSp SINE Alu 12 301 -12 828 258 80 98 chr10 21889459 21890059 -118426706 + HAL1 LINE L1 1372 1960 -547 460 288 94 24 chr10 21890204 21890416 -118426349 + L1ME1 LINE L1 3730 3956 -2190 471 229 65 0 chr10 21890417 21890612 -118426153 + L1ME1 LINE L1 5221 5444 -722 877 154 15 0 chr10 21890613 21890749 -118426016 - AluJb SINE Alu -17 295 158 702 186 84 99 chr10 21890763 21890859 -118425906 + L1ME1 LINE L1 5459 5555 -611 2011 120 0 41 chr10 21890859 21891196 -118425569 - AluSc SINE Alu 0 325 1 1192 148 40 0 chr10 21891206 21891408 -118425357 - L1PB4 LINE L1 -1 6155 5946 702 186 84 99 chr10 21891408 21891562 -118425203 + L1ME1 LINE L1 5564 5717 -449 1297 210 17 33 chr10 21891562 21892051 -118424714 + MER74B LTR ERVL 53 616 -6 349 227 81 8 chr10 21892067 21892214 -118424551 + L1ME1 LINE L1 5727 5899 -285 1134 198 93 43 chr10 21892246 21892369 -118424396 + AluJo SINE Alu 11 126 -186 450 0 0 0 chr10 21892369 21892419 -118424346 + (CA)n Simple_repeat Simple_repeat 1 50 0 1134 198 93 43 chr10 21892419 21892553 -118424212 + AluJo SINE Alu 126 281 -31 948 245 42 0 chr10 21892562 21892823 -118423942 + L1ME1 LINE L1 5876 6147 -19 824 193 44 17 chr10 21892823 21893004 -118423761 - MLT1D LTR MaLR 0 505 320 2189 111 0 0 chr10 21893127 21893416 -118423349 + AluSg SINE Alu 1 289 -21 265 236 28 0 chr10 21893431 21893503 -118423262 - MLT1D LTR MaLR -357 148 75 390 253 13 0 chr10 21893508 21893587 -118423178 - MER5A DNA MER1_type -103 86 7 1573 187 0 32 chr10 21893915 21894199 -118422566 - AluJo SINE Alu -26 286 12 259 103 0 0 chr10 21894512 21894551 -118422214 - MADE1 DNA Mariner -37 43 5 512 287 58 20 chr10 21896027 21896375 -118420390 + L1ME4a LINE L1 4358 4718 -1428 424 280 107 42 chr10 21896514 21896674 -118420091 + L1ME4a LINE L1 5409 5557 -564 2147 141 33 28 chr10 21896674 21897036 -118419729 - THE1B LTR MaLR 0 364 1 424 280 107 42 chr10 21897036 21897372 -118419393 + L1ME4a LINE L1 5557 5935 -186 2068 109 9 58 chr10 21897522 21897851 -118418914 + AluSq SINE Alu 1 313 0 205 360 56 24 chr10 21898956 21899081 -118417684 + MIR SINE MIR 20 148 -114 3045 68 2 5 chr10 21899361 21899770 -118416995 + L1PA13 LINE L1 5753 6160 -3 2215 113 0 3 chr10 21900970 21901272 -118415493 - AluSx SINE Alu -11 301 1 2267 136 11 3 chr10 21901890 21902242 -118414523 + THE1A LTR MaLR 1 355 0 2671 102 0 3 chr10 21904069 21904432 -118412333 - THE1B LTR MaLR -2 362 1 755 206 0 0 chr10 21904435 21904566 -118412199 + FRAM SINE Alu 28 158 -18 556 282 83 34 chr10 21904581 21904959 -118411806 + LTR16A LTR ERVL 18 418 -32 237 319 159 14 chr10 21905087 21905225 -118411540 + MIR SINE MIR 105 262 0 2014 196 24 9 chr10 21905387 21905806 -118410959 + MSTB1 LTR MaLR 8 432 0 23 0 0 0 chr10 21906699 21906722 -118410043 + AT_rich Low_complexity Low_complexity 1 23 0 562 307 133 16 chr10 21907121 21907610 -118409155 - L1ME LINE L1 -359 5803 5258 25 51 0 0 chr10 21907631 21907670 -118409095 + AT_rich Low_complexity Low_complexity 1 39 0 13133 188 35 22 chr10 21907881 21910898 -118405867 - L1PB1 LINE L1 0 6867 3890 180 0 0 0 chr10 21910898 21910918 -118405847 + (TTG)n Simple_repeat Simple_repeat 2 21 0 13133 188 35 22 chr10 21910918 21914274 -118402491 - L1PB1 LINE L1 -2977 3890 216 3367 69 5 7 chr10 21914274 21914723 -118402042 - LTR7 LTR ERV1 -2 448 1 13133 188 35 22 chr10 21914723 21914937 -118401828 - L1PB1 LINE L1 -6651 216 6 499 323 101 46 chr10 21914948 21915475 -118401290 - L1ME LINE L1 -1194 4952 4409 516 257 28 86 chr10 21915607 21915934 -118400831 - L1ME LINE L1 -1985 4161 3854 293 188 0 14 chr10 21916357 21916426 -118400339 - MER41B LTR ERV1 -310 325 258 2137 101 0 44 chr10 21916533 21916853 -118399912 - AluSp SINE Alu 0 307 1 494 331 61 27 chr10 21917232 21917607 -118399158 - L1ME LINE L1 -2320 3826 3439 243 284 134 25 chr10 21917648 21917916 -118398849 - L1ME LINE L1 -2751 3395 3069 1795 150 97 29 chr10 21917916 21918256 -118398509 - THE1B LTR MaLR -1 363 1 243 284 134 25 chr10 21918256 21918381 -118398384 - L1ME LINE L1 -3077 3069 2959 2031 238 73 18 chr10 21918470 21919407 -118397358 - L1ME1 LINE L1 -179 5987 5008 306 329 142 15 chr10 21919679 21919953 -118396812 - L1ME3 LINE L1 -211 5951 5643 664 252 28 8 chr10 21919996 21920246 -118396519 - L1ME3 LINE L1 -563 5607 5353 3648 139 11 26 chr10 21920260 21920721 -118396044 - Tigger1 DNA MER2_type -7 2411 1961 2398 73 0 3 chr10 21920721 21921021 -118395744 + AluY SINE Alu 1 299 -12 3648 139 11 26 chr10 21921021 21921201 -118395564 - Tigger1 DNA MER2_type -457 1961 1780 610 254 244 3 chr10 21921263 21921562 -118395203 - HsTC2 DNA Tc2 -1508 390 20 345 298 39 0 chr10 21921574 21921678 -118395087 + MER81 DNA DNA 1 108 -6 2774 13 0 3 chr10 21921745 21922054 -118394711 + AluYa5 SINE Alu 1 308 -3 306 324 76 36 chr10 21922332 21922582 -118394183 - L2 LINE L2 -58 3255 2996 2325 111 0 0 chr10 21922738 21923045 -118393720 - AluSx SINE Alu -5 307 1 460 88 71 80 chr10 21923052 21923165 -118393600 + L1MA9 LINE L1 6129 6240 -72 253 110 68 0 chr10 21923165 21923238 -118393527 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 132 113 0 chr10 21923241 21923294 -118393471 - L1MA9 LINE L1 -9 6303 6245 240 122 102 0 chr10 21923305 21923354 -118393411 + L1MA9 LINE L1 6256 6309 -3 346 284 98 76 chr10 21923487 21923762 -118393003 - L1MEd LINE L1 -5555 564 284 345 293 65 16 chr10 21923916 21924039 -118392726 - L1MEd LINE L1 -5922 197 69 241 302 127 16 chr10 21924631 21924757 -118392008 + MIR SINE MIR 2 141 -121 286 367 51 0 chr10 21924986 21925084 -118391681 + L2 LINE L2 3116 3218 -54 276 30 0 0 chr10 21925472 21925505 -118391260 + (TG)n Simple_repeat Simple_repeat 2 34 0 2680 88 3 0 chr10 21926042 21926396 -118390369 - THE1A LTR MaLR 0 355 1 279 109 250 0 chr10 21926604 21926668 -118390097 + MADE1 DNA Mariner 1 80 0 1540 191 28 58 chr10 21926919 21927281 -118389484 + MLT2B3 LTR ERVL 204 554 0 3801 239 78 70 chr10 21927281 21929002 -118387763 + MLT1A1-int LTR MaLR 1 1735 0 1233 164 38 116 chr10 21929007 21929403 -118387362 + MLT1A1 LTR MaLR 1 365 0 3331 287 67 16 chr10 21929457 21930628 -118386137 - L2 LINE L2 -384 2930 1701 286 333 133 6 chr10 21931346 21931511 -118385254 - MIR SINE MIR -21 241 56 277 388 23 0 chr10 21932578 21932707 -118384058 - L2 LINE L2 -957 2357 2226 381 328 140 8 chr10 21933052 21933317 -118383448 - L1M4 LINE L1 -1550 4596 4297 226 185 65 65 chr10 21933433 21933525 -118383240 + L1M4 LINE L1 4725 4816 -1330 439 314 79 60 chr10 21933595 21934015 -118382750 + L1M4 LINE L1 4878 5305 -841 21 0 0 0 chr10 21934115 21934136 -118382629 + AT_rich Low_complexity Low_complexity 1 21 0 363 317 90 64 chr10 21935171 21935780 -118380985 + L1ME LINE L1 4676 5300 -846 274 381 17 0 chr10 21935928 21936109 -118380656 + L1ME LINE L1 5465 5648 -514 741 319 126 17 chr10 21936363 21936768 -118379997 - MLT1G1 LTR MaLR 0 595 147 283 246 71 56 chr10 21936896 21937022 -118379743 - MLT1G1-int LTR MaLR -30 1341 1214 406 269 0 9 chr10 21937881 21937989 -118378776 - MLT1G1-int LTR MaLR -826 545 439 634 308 147 8 chr10 21938389 21938756 -118378009 - L2 LINE L2 -908 2406 1989 1973 130 43 10 chr10 21938762 21939063 -118377702 + AluSx SINE Alu 1 311 -1 3771 139 12 64 chr10 21941066 21941224 -118375541 + L1MA8 LINE L1 5548 5713 -578 1336 222 21 21 chr10 21941224 21941378 -118375387 - AluJo SINE Alu -24 288 132 207 0 0 0 chr10 21941378 21941401 -118375364 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1336 222 21 21 chr10 21941401 21941534 -118375231 - AluJo SINE Alu -179 133 1 3771 139 12 64 chr10 21941534 21941887 -118374878 + L1MA8 LINE L1 5713 6008 -283 2494 64 0 0 chr10 21941887 21942198 -118374567 + AluY SINE Alu 1 311 0 3771 139 12 64 chr10 21942198 21942450 -118374315 + L1MA8 LINE L1 6008 6272 -19 252 261 59 8 chr10 21942463 21942582 -118374183 + L1ME4a LINE L1 5960 6084 -37 25 31 0 0 chr10 21942618 21942650 -118374115 + AT_rich Low_complexity Low_complexity 1 32 0 2130 129 3 3 chr10 21942862 21943164 -118373601 + AluSx SINE Alu 1 302 -10 630 282 60 30 chr10 21943683 21943917 -118372848 - MIR SINE MIR -20 242 2 2093 127 7 3 chr10 21945098 21945397 -118371368 + AluSx SINE Alu 1 300 -12 23 33 0 0 chr10 21946053 21946083 -118370682 + AT_rich Low_complexity Low_complexity 1 30 0 2200 124 0 0 chr10 21946599 21946906 -118369859 + AluSg SINE Alu 1 307 -3 240 35 0 0 chr10 21947825 21947854 -118368911 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 342 325 52 100 chr10 21948191 21948270 -118368495 + L2 LINE L2 2997 3078 -194 1222 205 46 60 chr10 21948270 21948640 -118368125 + MLT1A1 LTR MaLR 1 365 0 342 325 52 100 chr10 21948640 21948849 -118367916 + L2 LINE L2 3078 3271 -1 216 0 0 0 chr10 21949072 21949096 -118367669 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 566 63 13 0 chr10 21949284 21949363 -118367402 + (TTTCC)n Simple_repeat Simple_repeat 5 84 0 690 13 0 0 chr10 21949499 21949578 -118367187 + (TTTCC)n Simple_repeat Simple_repeat 3 81 0 22 35 0 0 chr10 21951400 21951429 -118365336 + AT_rich Low_complexity Low_complexity 1 29 0 344 231 26 0 chr10 21951516 21951594 -118365171 - L1MB8 LINE L1 -6 6172 6093 2385 153 19 2 chr10 21951626 21952043 -118364722 - L1MB4 LINE L1 -33 6147 5724 775 133 24 12 chr10 21953692 21953858 -118362907 + CT-rich Low_complexity Low_complexity 1 168 0 989 180 84 63 chr10 21953858 21954097 -118362668 - AluJo SINE Alu -18 294 51 624 154 0 0 chr10 21956390 21956494 -118360271 - MER5A DNA MER1_type -83 106 3 2195 129 3 0 chr10 21957088 21957391 -118359374 - AluSp SINE Alu -9 304 1 28 48 0 0 chr10 21957458 21957500 -118359265 + AT_rich Low_complexity Low_complexity 1 42 0 5999 101 18 9 chr10 21958116 21959145 -118357620 + L1PA10 LINE L1 5135 6172 0 2197 96 13 7 chr10 21959527 21959830 -118356935 + AluSx SINE Alu 1 305 -7 1900 149 7 3 chr10 21960652 21960961 -118355804 - AluSq SINE Alu -3 310 1 2118 173 5 16 chr10 21961024 21961393 -118355372 + MLT1A1 LTR MaLR 1 365 0 318 328 72 8 chr10 21961406 21961531 -118355234 - L2 LINE L2 0 3272 3140 1641 165 23 42 chr10 21961704 21962013 -118354752 + AluJo SINE Alu 1 303 -9 321 26 0 0 chr10 21962043 21962081 -118354684 + (CA)n Simple_repeat Simple_repeat 1 38 0 2086 254 27 24 chr10 21962856 21963557 -118353208 + L1M4 LINE L1 4594 5296 -850 * 6908 42 1 8 chr10 21963555 21964425 -118352340 - L1PA5 LINE L1 -1048 5098 4235 7398 41 1 1 chr10 21964425 21965472 -118351293 + L1PA5 LINE L1 5106 6152 -2 8134 214 23 12 chr10 21965506 21967423 -118349342 - L1PA15 LINE L1 -2 6163 4217 2298 74 14 0 chr10 21967423 21967719 -118349046 - AluY SINE Alu -11 300 1 8134 214 23 12 chr10 21967719 21968622 -118348143 - L1PA15 LINE L1 -1948 4217 3326 216 0 0 0 chr10 21968726 21968750 -118348015 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr10 21968750 21968776 -118347989 + AT_rich Low_complexity Low_complexity 1 26 0 2330 82 0 22 chr10 21969046 21969364 -118347401 - AluY SINE Alu 0 311 1 1858 247 87 49 chr10 21969817 21970220 -118346545 + L1MEc LINE L1 425 811 -5585 291 28 0 0 chr10 21970220 21970256 -118346509 + (TA)n Simple_repeat Simple_repeat 1 36 0 1858 247 87 49 chr10 21970256 21971461 -118345304 + L1MEc LINE L1 811 2167 -4229 2204 116 0 0 chr10 21971461 21971755 -118345010 + AluSc SINE Alu 1 294 -15 1858 247 87 49 chr10 21971755 21972046 -118344719 + L1MEc LINE L1 2167 2445 -3951 287 278 11 0 chr10 21972217 21972307 -118344458 + L1MEc LINE L1 2567 2657 -3558 1030 235 29 7 chr10 21972322 21972594 -118344171 + L1MEc LINE L1 3572 3849 -2366 1466 226 7 0 chr10 21972605 21972893 -118343872 + AluJo SINE Alu 3 292 -20 24 32 0 0 chr10 21972949 21972980 -118343785 + AT_rich Low_complexity Low_complexity 1 31 0 4051 116 14 5 chr10 21973591 21974210 -118342555 + L1PA13 LINE L1 5537 6161 -2 755 109 0 179 chr10 21974728 21974912 -118341853 + MLT2A1 LTR ERVL 294 444 0 263 290 65 9 chr10 21975850 21975957 -118340808 - L1ME4a LINE L1 -42 6079 5967 7699 201 115 30 chr10 21975996 21978224 -118338541 + Tigger1 DNA MER2_type 1 2417 -1 520 273 78 55 chr10 21978240 21978673 -118338092 - L1ME4a LINE L1 -234 5887 5445 232 312 85 20 chr10 21978709 21978956 -118337809 + L1M4 LINE L1 4574 4836 -1310 688 328 93 20 chr10 21979137 21979359 -118337406 + L2 LINE L2 2874 3078 -235 2047 148 3 0 chr10 21979359 21979662 -118337103 - AluSq SINE Alu -7 306 3 688 328 93 20 chr10 21979662 21979847 -118336918 + L2 LINE L2 3078 3311 -2 22 0 0 0 chr10 21980395 21980417 -118336348 + AT_rich Low_complexity Low_complexity 1 22 0 2764 88 3 0 chr10 21980918 21981280 -118335485 + THE1B LTR MaLR 1 363 -1 409 297 91 67 chr10 21981547 21981720 -118335045 - MIR SINE MIR 0 262 71 782 109 86 0 chr10 21981720 21981848 -118334917 + MER85 DNA T2_type 1 139 0 409 297 91 67 chr10 21981848 21981921 -118334844 - MIR SINE MIR -191 71 1 1226 205 137 54 chr10 21982004 21982326 -118334439 - MLT1C LTR MaLR 0 467 100 1860 159 7 19 chr10 21982326 21982635 -118334130 - AluSx SINE Alu -5 307 3 1226 205 137 54 chr10 21982635 21982737 -118334028 - MLT1C LTR MaLR -367 100 8 1701 170 18 14 chr10 21983191 21983506 -118333259 + AluSx SINE Alu 1 316 0 1535 151 14 51 chr10 21985054 21985346 -118331419 + AluJo SINE Alu 26 306 -6 1370 275 22 24 chr10 21985873 21986284 -118330481 - LTR40a LTR ERVL -14 505 96 8911 153 12 5 chr10 21986337 21986438 -118330327 + Tigger3(Golem) DNA MER2_type 1 100 -2929 2435 133 68 2 chr10 21986438 21986867 -118329898 + MSTB2 LTR MaLR 1 457 0 8911 153 12 5 chr10 21986867 21988202 -118328563 + Tigger3(Golem) DNA MER2_type 100 1447 -1582 3362 134 13 26 chr10 21988206 21988812 -118327953 + Tigger3(Golem) DNA MER2_type 1558 2155 -874 1696 152 0 17 chr10 21989184 21989480 -118327285 - L1PB4 LINE L1 -7 6149 5859 267 244 111 44 chr10 21990825 21990915 -118325850 + MIR SINE MIR 39 134 -128 20846 43 6 0 chr10 21991032 21994221 -118322544 + L1P LINE L1 1239 4446 -1700 2248 153 12 75 chr10 21994543 21995151 -118321614 - L1MCb LINE L1 -4878 1167 709 923 224 32 8 chr10 21995142 21995392 -118321373 - L1MCb LINE L1 -6152 412 157 * 23 33 0 0 chr10 21995424 21995454 -118321311 + AT_rich Low_complexity Low_complexity 1 30 0 352 293 20 27 chr10 21995803 21995953 -118320812 - MIR SINE MIR -24 238 90 655 169 19 50 chr10 21995958 21996118 -118320647 - MER33 DNA MER1_type -169 155 1 567 282 115 4 chr10 21996206 21996440 -118320325 - MIR SINE MIR 0 262 3 313 358 74 18 chr10 21997294 21997523 -118319242 - MIR SINE MIR -1 261 20 353 294 111 7 chr10 21997547 21997695 -118319070 - MIR SINE MIR -73 135 9 22 0 0 0 chr10 21998406 21998428 -118318337 + AT_rich Low_complexity Low_complexity 1 22 0 278 290 40 30 chr10 21998569 21998769 -118317996 - L1ME2 LINE L1 -232 5932 5731 1329 202 95 26 chr10 21998847 21999194 -118317571 - MLT1B LTR MaLR -19 371 1 344 304 212 0 chr10 21999221 21999405 -118317360 + MIR SINE MIR 16 238 -24 1653 183 0 11 chr10 21999455 21999729 -118317036 + AluJo SINE Alu 11 281 -31 301 383 10 0 chr10 21999750 21999943 -118316822 - L1ME2 LINE L1 -2169 5639 5445 339 318 7 61 chr10 22000187 22000335 -118316430 - MER5A DNA MER1_type 0 189 50 183 316 41 31 chr10 22000505 22000603 -118316162 + MIR3 SINE MIR 105 203 -5 349 259 127 0 chr10 22001155 22001321 -118315444 + L1ME LINE L1 5476 5662 -459 2059 136 0 3 chr10 22001612 22001898 -118314867 + AluSx SINE Alu 1 285 -27 27 0 0 0 chr10 22001898 22001925 -118314840 + AT_rich Low_complexity Low_complexity 1 27 0 251 263 0 0 chr10 22002681 22002738 -118314027 + CT-rich Low_complexity Low_complexity 2 58 0 1436 100 50 5 chr10 22002791 22003011 -118313754 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr10 22003564 22003585 -118313180 + AT_rich Low_complexity Low_complexity 1 21 0 3203 187 30 3 chr10 22004557 22005200 -118311565 - LTR62 LTR ERVK -8 711 52 2311 64 0 3 chr10 22006403 22006706 -118310059 + AluY SINE Alu 2 303 0 12300 77 3 4 chr10 22006861 22008544 -118308221 + L1P LINE L1 1 1681 -4465 38561 51 2 2 chr10 22008736 22013801 -118302964 - L1P LINE L1 -1083 5063 1 1195 214 29 63 chr10 22013953 22014037 -118302728 + MLT1A1 LTR MaLR 1 86 -279 1798 184 0 0 chr10 22014037 22014350 -118302415 - AluSx SINE Alu 0 315 3 1195 214 29 63 chr10 22014350 22014417 -118302348 + MLT1A1 LTR MaLR 86 154 -211 1836 139 78 20 chr10 22014417 22014761 -118302004 + THE1B LTR MaLR 1 364 0 1195 214 29 63 chr10 22014761 22014985 -118301780 + MLT1A1 LTR MaLR 154 365 0 1597 189 7 23 chr10 22015760 22016061 -118300704 - AluJb SINE Alu -16 296 1 225 200 20 0 chr10 22016287 22016337 -118300428 + CT-rich Low_complexity Low_complexity 2 52 0 206 209 47 0 chr10 22016578 22016621 -118300144 + MER5A DNA MER1_type 144 188 -1 685 329 27 9 chr10 22018942 22019161 -118297604 + MIR SINE MIR 1 223 -39 2223 146 72 0 chr10 22019175 22019579 -118297186 - MER1A DNA MER1_type 0 529 97 251 75 25 0 chr10 22019697 22019737 -118297028 - LTR62 LTR ERVK -668 51 11 393 318 43 2 chr10 22020192 22020362 -118296403 - MIR3 SINE MIR -44 218 33 23 68 0 0 chr10 22021581 22021625 -118295140 + AT_rich Low_complexity Low_complexity 1 44 0 4154 173 48 46 chr10 22021687 22022181 -118294584 + L1MA10 LINE L1 4456 4948 -1386 180 0 0 0 chr10 22022181 22022201 -118294564 + (CA)n Simple_repeat Simple_repeat 1 20 0 4154 173 48 46 chr10 22022201 22022824 -118293941 + L1MA10 LINE L1 4948 5569 -765 1989 135 3 0 chr10 22022824 22023231 -118293534 + AluSx SINE Alu 1 408 0 4154 173 48 46 chr10 22023231 22023679 -118293086 + L1MA10 LINE L1 5569 6032 -302 1865 141 44 56 chr10 22023679 22024020 -118292745 + MER1B DNA MER1_type 1 337 0 4154 173 48 46 chr10 22024020 22024322 -118292443 + L1MA10 LINE L1 6032 6332 -2 11705 28 1 15 chr10 22025103 22027269 -118289496 + L1PA4 LINE L1 3998 6152 -3 536 277 27 0 chr10 22027447 22027631 -118289134 - MER5A DNA MER1_type 0 189 1 558 307 47 43 chr10 22027722 22027979 -118288786 + MIR SINE MIR 2 259 -3 2102 104 0 44 chr10 22027979 22028296 -118288469 + AluY SINE Alu 1 303 -8 1620 302 167 7 chr10 22028356 22029038 -118287727 + L2 LINE L2 520 1310 -2004 251 347 24 16 chr10 22029134 22029258 -118287507 + LTR16C LTR ERVL 65 189 -302 1587 205 36 31 chr10 22030281 22030730 -118286035 - MLT1C LTR MaLR -9 458 8 703 271 34 30 chr10 22031271 22031540 -118285225 + MLT1I LTR MaLR 1 270 -139 23 0 0 0 chr10 22031996 22032019 -118284746 + AT_rich Low_complexity Low_complexity 1 23 0 1067 229 0 8 chr10 22033065 22033309 -118283456 + L1PB4 LINE L1 5912 6153 -3 2756 222 58 9 chr10 22033805 22034562 -118282203 - L1PB3 LINE L1 -3 6151 5358 1604 123 29 48 chr10 22034708 22035018 -118281747 - L1MA1 LINE L1 -2 6300 5997 652 180 0 23 chr10 22035192 22035320 -118281445 + MER94 DNA DNA 8 132 -2 2192 125 0 13 chr10 22035358 22035670 -118281095 + AluSq SINE Alu 1 308 -5 214 370 0 12 chr10 22036369 22036450 -118280315 + MIR3 SINE MIR 120 199 -9 357 174 0 0 chr10 22037086 22037155 -118279610 + (TATG)n Simple_repeat Simple_repeat 2 70 0 700 186 32 0 chr10 22037156 22037280 -118279485 - FLAM_C SINE Alu -14 129 2 24 0 0 0 chr10 22038154 22038178 -118278587 + AT_rich Low_complexity Low_complexity 1 24 0 229 182 0 91 chr10 22038781 22038836 -118277929 + MLT1J1 LTR MaLR 4 53 -393 682 196 18 105 chr10 22038847 22039076 -118277689 - MER3 DNA MER1_type 0 209 1 1780 28 5 0 chr10 22039730 22039947 -118276818 - L1P2 LINE L1 -447 5707 5490 1632 62 5 0 chr10 22039949 22040160 -118276605 + L1PA5 LINE L1 5928 6139 -15 330 182 0 0 chr10 22040160 22040226 -118276539 + (TA)n Simple_repeat Simple_repeat 1 66 0 284 250 111 76 chr10 22040579 22040723 -118276042 - MIR3 SINE MIR -47 161 13 265 282 14 0 chr10 22041251 22041322 -118275443 - MIR3 SINE MIR -15 193 122 21 0 0 0 chr10 22042639 22042660 -118274105 + AT_rich Low_complexity Low_complexity 1 21 0 647 270 30 100 chr10 22042660 22042763 -118274002 - MIR SINE MIR -3 259 150 2347 123 34 14 chr10 22042763 22043120 -118273645 - THE1B LTR MaLR 0 364 1 647 270 30 100 chr10 22043120 22043304 -118273461 - MIR SINE MIR -112 150 3 197 257 0 0 chr10 22043341 22043376 -118273389 + L2 LINE L2 3211 3245 -27 1821 192 69 5 chr10 22043635 22044010 -118272755 - MLT1D LTR MaLR -106 399 1 180 0 0 0 chr10 22044606 22044626 -118272139 + (A)n Simple_repeat Simple_repeat 1 20 0 438 296 155 24 chr10 22044626 22044832 -118271933 + MIR SINE MIR 20 252 -10 611 271 66 6 chr10 22045478 22045659 -118271106 - Charlie8 DNA MER1_type -2193 224 33 761 152 7 7 chr10 22046441 22046579 -118270186 - L1PB2 LINE L1 -2 6149 6012 279 0 0 0 chr10 22046913 22046944 -118269821 + (T)n Simple_repeat Simple_repeat 1 31 0 23093 175 23 13 chr10 22049630 22054886 -118261879 - L1PA13 LINE L1 -1045 5752 1 1604 188 0 0 chr10 22054901 22055177 -118261588 + L1MC/D LINE L1 5311 5586 -758 408 200 30 0 chr10 22055177 22055272 -118261493 + L1MC2 LINE L1 6242 6344 0 21 0 0 0 chr10 22055323 22055344 -118261421 + AT_rich Low_complexity Low_complexity 1 21 0 274 252 39 19 chr10 22056547 22056650 -118260115 + L1ME LINE L1 5410 5514 -650 2306 219 99 12 chr10 22056827 22057656 -118259109 - L1ME1 LINE L1 -125 6041 5135 185 309 0 0 chr10 22058087 22058142 -118258623 - MIR SINE MIR -6 256 202 374 391 21 11 chr10 22058467 22058656 -118258109 - MIR SINE MIR -49 213 23 238 301 20 65 chr10 22059015 22059168 -118257597 + MLT1H LTR MaLR 50 195 -354 370 272 132 44 chr10 22059661 22059911 -118256854 + L2 LINE L2 2332 2603 -711 832 178 76 23 chr10 22060022 22060286 -118256479 - MER33 DNA MER1_type 0 324 47 2219 178 19 9 chr10 22061441 22061862 -118254903 + MSTB LTR MaLR 1 425 -1 269 300 9 9 chr10 22063116 22063226 -118253539 - L1MC4 LINE L1 0 8042 7933 581 242 60 32 chr10 22063274 22063522 -118253243 - L1MC4 LINE L1 -190 7852 7598 24 0 0 0 chr10 22063528 22063552 -118253213 + AT_rich Low_complexity Low_complexity 1 24 0 269 23 0 70 chr10 22063553 22063596 -118253169 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 8934 31 0 0 chr10 22063596 22065438 -118251327 - L1PA4 LINE L1 -4 6151 4305 29076 59 2 7 chr10 22065438 22069210 -118247555 - L1PA4 LINE L1 -2388 3758 7 23 0 0 0 chr10 22069365 22069388 -118247377 + AT_rich Low_complexity Low_complexity 1 23 0 2115 123 0 3 chr10 22070301 22070602 -118246163 + AluSc SINE Alu 1 300 -9 1466 221 17 25 chr10 22071231 22071588 -118245177 + MLT1A1 LTR MaLR 1 354 -11 267 338 100 23 chr10 22072540 22072746 -118244019 - MIR SINE MIR -36 226 2 181 206 0 0 chr10 22072824 22072858 -118243907 + L2 LINE L2 3272 3305 -8 1012 311 95 7 chr10 22072879 22073532 -118243233 - L2 LINE L2 -37 3276 2557 282 143 0 0 chr10 22074274 22074323 -118242442 + (A)n Simple_repeat Simple_repeat 1 49 0 415 189 7 115 chr10 22075036 22075184 -118241581 + MLT1E2 LTR MaLR 18 149 -477 1414 135 0 0 chr10 22076133 22076333 -118240432 + AluSx SINE Alu 12 211 -101 24 0 0 0 chr10 22076333 22076357 -118240408 + AT_rich Low_complexity Low_complexity 1 24 0 1390 224 78 20 chr10 22077182 22077580 -118239185 + L1MB8 LINE L1 5406 5826 -352 * 1580 171 55 64 chr10 22077574 22077712 -118239053 + L1MB8 LINE L1 5762 5900 -278 2175 140 0 0 chr10 22077712 22078020 -118238745 - AluSq SINE Alu -5 308 1 1580 171 55 64 chr10 22078020 22078302 -118238463 + L1MB8 LINE L1 5900 6178 0 231 213 0 0 chr10 22079203 22079250 -118237515 + L1MB8 LINE L1 6132 6178 0 423 133 76 38 chr10 22079323 22079428 -118237337 - L1MB8 LINE L1 -11 6167 6059 1325 168 23 61 chr10 22081158 22081322 -118235443 - AluJo SINE Alu -31 281 129 378 0 0 0 chr10 22081322 22081364 -118235401 + (TA)n Simple_repeat Simple_repeat 2 43 0 1325 168 23 61 chr10 22081364 22081461 -118235304 - AluJo SINE Alu -183 129 30 181 303 28 55 chr10 22083738 22083847 -118232918 - MIR SINE MIR -104 158 53 32629 48 3 1 chr10 22084161 22089094 -118227671 - L1PA4 LINE L1 -3 6152 1210 2137 135 0 0 chr10 22089717 22090020 -118226745 - AluSx SINE Alu -9 303 1 243 328 9 17 chr10 22090281 22090397 -118226368 - L1ME4a LINE L1 -60 6061 5947 25 51 0 0 chr10 22090583 22090622 -118226143 + AT_rich Low_complexity Low_complexity 1 39 0 1308 128 66 4 chr10 22090622 22090864 -118225901 - L1MA4 LINE L1 -2 6298 6042 204 97 0 0 chr10 22091738 22091769 -118224996 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 638 159 0 19 chr10 22091772 22091879 -118224886 - FLAM_A SINE Alu -34 108 4 303 206 14 0 chr10 22091928 22092001 -118224764 + L1MA10 LINE L1 6260 6333 -1 2032 216 36 6 chr10 22092003 22092531 -118224234 - L1M4c LINE L1 -3906 2478 1935 209 313 101 0 chr10 22093335 22093434 -118223331 + MIR SINE MIR 101 209 -53 252 182 15 76 chr10 22093671 22093737 -118223028 - MIR3 SINE MIR -8 200 139 1789 190 45 30 chr10 22094499 22094740 -118222025 + MLT2D LTR ERVL 1 252 -162 2052 110 0 44 chr10 22094740 22095057 -118221708 - AluSx SINE Alu -9 303 1 1789 190 45 30 chr10 22095057 22095215 -118221550 + MLT2D LTR ERVL 252 406 -8 389 286 9 9 chr10 22095963 22096068 -118220697 - MIR SINE MIR -67 141 37 23 33 0 0 chr10 22096210 22096240 -118220525 + AT_rich Low_complexity Low_complexity 1 30 0 2333 76 0 7 chr10 22096869 22097173 -118219592 + AluY SINE Alu 1 302 -9 5272 138 42 24 chr10 22097271 22098259 -118218506 - L1MA8 LINE L1 -2 6289 5285 2242 80 22 26 chr10 22099343 22099656 -118217109 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 22099897 22099926 -118216839 + AT_rich Low_complexity Low_complexity 1 29 0 1702 225 28 5 chr10 22101013 22101439 -118215326 + MER63B DNA MER1_type 1 436 0 612 269 107 5 chr10 22101447 22101644 -118215121 + MIR SINE MIR 46 262 0 2889 112 9 2 chr10 22101666 22102113 -118214652 + MER41B LTR ERV1 95 544 -91 1757 116 14 28 chr10 22102445 22102715 -118214050 + L1PA15 LINE L1 5886 6153 -12 1949 141 157 5 chr10 22102715 22103084 -118213681 - MSTA LTR MaLR 0 428 4 1757 116 14 28 chr10 22103084 22103097 -118213668 + L1PA15 LINE L1 6153 6165 0 2020 168 23 29 chr10 22103097 22103415 -118213350 + MSTB LTR MaLR 41 358 -68 1925 101 101 0 chr10 22103415 22103683 -118213082 - AluSc SINE Alu -12 297 3 2020 168 23 29 chr10 22103683 22103750 -118213015 + MSTB LTR MaLR 358 424 -2 561 270 66 21 chr10 22103896 22104137 -118212628 - MER112 DNA MER1_type -2 254 3 6940 66 0 14 chr10 22104239 22105567 -118211198 + L1PA8 LINE L1 4842 6162 -10 569 239 43 38 chr10 22106077 22106261 -118210504 - L1ME1 LINE L1 -20 6146 5962 28 0 0 0 chr10 22106267 22106295 -118210470 + AT_rich Low_complexity Low_complexity 1 28 0 1602 182 23 23 chr10 22107285 22107592 -118209173 - AluJo SINE Alu -5 307 1 1998 144 13 0 chr10 22107592 22107890 -118208875 - AluSx SINE Alu -10 302 1 206 143 29 0 chr10 22107928 22107963 -118208802 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1920 141 4 0 chr10 22108473 22108749 -118208016 + AluSx SINE Alu 1 277 -35 422 0 0 36 chr10 22108781 22108836 -118207929 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1081 66 0 0 chr10 22108836 22108972 -118207793 + L1PA10 LINE L1 6032 6167 -1 296 252 78 0 chr10 22109285 22109388 -118207377 + MER117 DNA MER1_type 47 157 -40 1989 167 0 3 chr10 22109580 22109885 -118206880 - AluJb SINE Alu -6 306 3 1502 113 0 5 chr10 22110001 22110205 -118206560 - AluSc SINE Alu 0 309 107 21 0 0 0 chr10 22111182 22111203 -118205562 + AT_rich Low_complexity Low_complexity 1 21 0 350 275 98 79 chr10 22114858 22115276 -118201489 - L1MEc LINE L1 -4094 2302 1877 212 167 0 0 chr10 22115284 22115320 -118201445 + (TG)n Simple_repeat Simple_repeat 1 36 0 2246 115 0 34 chr10 22115508 22115831 -118200934 - AluSx SINE Alu 0 312 1 1958 154 0 13 chr10 22116141 22116452 -118200313 + AluJb SINE Alu 1 307 -5 1848 202 108 27 chr10 22116540 22117060 -118199705 - MER68 LTR ERV1 0 562 1 677 172 30 98 chr10 22117375 22117578 -118199187 - MER20 DNA MER1_type 0 219 31 240 299 27 61 chr10 22117672 22117819 -118198946 - MIR SINE MIR -54 208 67 636 295 98 9 chr10 22117863 22118087 -118198678 - MIR SINE MIR 0 262 19 2226 84 0 3 chr10 22120046 22120358 -118196407 - AluSx SINE Alu 0 311 1 415 294 32 105 chr10 22121893 22122264 -118194501 - L2 LINE L2 -14 3258 2915 2058 98 4 0 chr10 22124744 22125019 -118191746 - AluSg1 SINE Alu -33 276 1 2089 133 10 7 chr10 22125645 22125954 -118190811 + AluSx SINE Alu 1 310 -2 372 321 42 31 chr10 22126523 22126716 -118190049 - MIR SINE MIR -56 206 12 1547 162 29 42 chr10 22127955 22128264 -118188501 + AluJo SINE Alu 1 305 -7 228 208 21 0 chr10 22128564 22128612 -118188153 - L1MC4a LINE L1 -1149 6659 6611 21 36 0 0 chr10 22128825 22128853 -118187912 + AT_rich Low_complexity Low_complexity 1 28 0 1843 274 71 15 chr10 22128891 22129668 -118187097 - L1MC4a LINE L1 -1735 6073 5254 448 325 142 21 chr10 22129756 22130088 -118186677 - L1MC4a LINE L1 -985 5161 4790 296 279 84 84 chr10 22130173 22130352 -118186413 - MIR3 SINE MIR -2 206 28 2034 85 7 14 chr10 22130713 22131031 -118185734 - AluY SINE Alu 0 316 1 484 291 54 35 chr10 22131042 22131230 -118185535 - MIR SINE MIR -12 250 61 2218 113 3 0 chr10 22131230 22131522 -118185243 - AluSx SINE Alu -19 293 1 484 291 54 35 chr10 22131522 22131578 -118185187 - MIR SINE MIR -201 61 8 23 0 0 0 chr10 22131668 22131691 -118185074 + AT_rich Low_complexity Low_complexity 1 23 0 1951 153 0 29 chr10 22132889 22133203 -118183562 + AluSx SINE Alu 1 305 -7 30 0 0 0 chr10 22133265 22133295 -118183470 + AT_rich Low_complexity Low_complexity 1 30 0 5140 22 0 0 chr10 22133751 22134339 -118182426 + L1PA3 LINE L1 5563 6150 -5 1357 136 226 0 chr10 22134496 22134739 -118182026 + AluSx SINE Alu 1 298 -14 373 264 80 49 chr10 22135821 22135984 -118180781 + L1M4 LINE L1 3784 3951 -2195 761 176 0 0 chr10 22136537 22136662 -118180103 + FLAM_C SINE Alu 1 125 -18 276 102 0 0 chr10 22136668 22136717 -118180048 + Alu SINE Alu 251 299 -1 1075 157 28 6 chr10 22137128 22137306 -118179459 - AluJo SINE Alu -10 302 121 222 274 24 24 chr10 22138313 22138397 -118178368 + MIR SINE MIR 141 224 -38 1784 186 14 0 chr10 22138418 22138713 -118178052 - AluJo SINE Alu -13 299 1 203 171 0 0 chr10 22138757 22138798 -118177967 + A-rich Low_complexity Low_complexity 1 41 0 2619 103 24 2 chr10 22140181 22140590 -118176175 + L1MA1 LINE L1 5885 6302 0 254 243 14 0 chr10 22140846 22140916 -118175849 - MER63A DNA MER1_type 0 210 140 34 24 0 0 chr10 22140939 22140980 -118175785 + AT_rich Low_complexity Low_complexity 1 41 0 235 209 0 0 chr10 22140980 22141023 -118175742 - MER63A DNA MER1_type -167 43 1 313 262 270 0 chr10 22141383 22141509 -118175256 + MIR SINE MIR 77 236 -26 40 37 0 0 chr10 22142263 22142317 -118174448 + AT_rich Low_complexity Low_complexity 1 54 0 691 188 27 27 chr10 22142523 22142672 -118174093 + MER33 DNA MER1_type 1 149 -175 203 310 69 23 chr10 22142741 22142828 -118173937 + L2 LINE L2 3210 3300 -13 25 65 0 0 chr10 22143080 22143126 -118173639 + AT_rich Low_complexity Low_complexity 1 46 0 1984 114 82 17 chr10 22143971 22144323 -118172442 + THE1C LTR MaLR 1 375 0 660 199 75 0 chr10 22145152 22145338 -118171427 - LTR37A LTR ERV1 -2 424 225 777 152 85 12 chr10 22145388 22145553 -118171212 + MER44D DNA MER2_type 1 447 -162 4627 133 21 9 chr10 22145579 22146391 -118170374 - L1PB3 LINE L1 -2 6152 5331 852 140 13 20 chr10 22146391 22146541 -118170224 + MER44D DNA MER2_type 456 604 -1 410 211 73 9 chr10 22146544 22146653 -118170112 - LTR37A LTR ERV1 -259 167 52 2426 60 0 13 chr10 22147178 22147476 -118169289 - AluY SINE Alu -17 294 1 21 0 0 0 chr10 22147615 22147636 -118169129 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22148892 22148912 -118167853 + (A)n Simple_repeat Simple_repeat 1 20 0 2124 126 134 11 chr10 22149030 22149411 -118167354 + MSTA LTR MaLR 1 428 0 982 47 78 0 chr10 22150133 22150261 -118166504 + MER85 DNA T2_type 2 139 0 218 371 0 0 chr10 22151667 22151756 -118165009 + C-rich Low_complexity Low_complexity 1 89 0 1987 154 0 19 chr10 22152287 22152599 -118164166 - AluJo SINE Alu -6 306 1 634 318 32 12 chr10 22153487 22153739 -118163026 - MIR SINE MIR 0 262 6 396 0 0 0 chr10 22154400 22154444 -118162321 + (T)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 22154714 22154735 -118162030 + (TGAG)n Simple_repeat Simple_repeat 1 21 0 490 274 108 32 chr10 22155256 22155488 -118161277 + MIR SINE MIR 1 249 -13 2759 115 11 29 chr10 22156928 22157370 -118159395 + Tigger2a DNA MER2_type 1 434 0 261 301 16 41 chr10 22158358 22158481 -118158284 + MLT1G1 LTR MaLR 460 579 -16 2529 57 0 19 chr10 22158833 22159150 -118157615 + AluY SINE Alu 1 311 0 810 302 56 57 chr10 22159157 22159697 -118157068 - LTR67 LTR ERVL -18 539 1 2357 149 50 38 chr10 22159811 22160306 -118156459 + L1PA16 LINE L1 5666 6166 0 1773 169 35 12 chr10 22161277 22161621 -118155144 - MLT1A1 LTR MaLR 0 365 14 1250 226 148 2 chr10 22161649 22162074 -118154691 - Charlie4a DNA MER1_type 0 508 22 367 261 114 44 chr10 22162192 22162552 -118154213 - L1M4 LINE L1 -1283 4863 4479 370 214 12 24 chr10 22162933 22163017 -118153748 - L2 LINE L2 -2 3311 3229 * 2183 273 138 8 chr10 22163001 22163850 -118152915 - L2 LINE L2 -1295 2019 1061 376 167 62 21 chr10 22163853 22163949 -118152816 - L1M4 LINE L1 -1541 4605 4506 380 283 102 17 chr10 22163951 22164128 -118152637 - L2 LINE L2 -2259 1055 864 406 307 270 10 chr10 22164275 22164686 -118152079 - L2 LINE L2 -2447 867 350 24 32 0 0 chr10 22166216 22166247 -118150518 + AT_rich Low_complexity Low_complexity 1 31 0 3502 135 9 8 chr10 22166671 22167196 -118149569 - MER1A DNA MER1_type -1 526 1 210 397 0 13 chr10 22168678 22168756 -118148009 - MIR3 SINE MIR -8 200 124 633 280 134 22 chr10 22169932 22170336 -118146429 - MLT1K LTR MaLR 0 588 140 735 169 0 0 chr10 22170824 22170942 -118145823 + FLAM_C SINE Alu 1 118 -15 1317 203 68 15 chr10 22171923 22172189 -118144576 + AluJo SINE Alu 3 282 -30 784 143 0 0 chr10 22172657 22172776 -118143989 - FLAM_C SINE Alu -22 121 3 1787 167 14 7 chr10 22173145 22173439 -118143326 - AluJo SINE Alu -16 296 1 180 0 0 0 chr10 22174332 22174352 -118142413 + (TCC)n Simple_repeat Simple_repeat 3 22 0 3485 142 10 3 chr10 22174975 22175560 -118141205 - L1PA16 LINE L1 0 6166 5578 2159 106 13 23 chr10 22175560 22175862 -118140903 - AluSx SINE Alu -13 299 1 23 33 0 0 chr10 22177328 22177358 -118139407 + AT_rich Low_complexity Low_complexity 1 30 0 1782 187 26 10 chr10 22177366 22177671 -118139094 + AluJb SINE Alu 1 310 -2 333 267 22 74 chr10 22177717 22177852 -118138913 + MIR SINE MIR 5 132 -130 269 333 27 9 chr10 22178356 22178367 -118138398 + MIR SINE MIR 137 146 -116 1627 189 3 20 chr10 22178367 22178673 -118138092 + AluJo SINE Alu 3 303 -9 269 333 27 9 chr10 22178673 22178772 -118137993 + MIR SINE MIR 146 249 -13 2349 93 0 19 chr10 22179140 22179452 -118137313 - AluSc SINE Alu -3 306 1 2470 73 0 0 chr10 22180002 22180302 -118136463 + AluY SINE Alu 1 300 -11 1421 12 0 0 chr10 22180305 22180467 -118136298 + L1PA2 LINE L1 5992 6153 -2 24 32 0 0 chr10 22180501 22180532 -118136233 + AT_rich Low_complexity Low_complexity 1 31 0 1934 135 10 43 chr10 22181254 22181558 -118135207 - AluJb SINE Alu -18 294 1 724 279 90 9 chr10 22181784 22182006 -118134759 - MIR SINE MIR -20 242 3 2198 138 3 0 chr10 22182070 22182381 -118134384 + AluSx SINE Alu 1 312 0 24 32 0 0 chr10 22182416 22182447 -118134318 + AT_rich Low_complexity Low_complexity 1 31 0 30 59 0 0 chr10 22182590 22182641 -118134124 + AT_rich Low_complexity Low_complexity 1 51 0 1652 184 0 20 chr10 22183399 22183692 -118133073 - AluJo SINE Alu -25 287 1 2230 112 0 0 chr10 22184274 22184569 -118132196 - AluSx SINE Alu -17 295 1 358 239 194 0 chr10 22184591 22184725 -118132040 - L1ME2 LINE L1 -280 5884 5725 1037 277 95 25 chr10 22186161 22186804 -118129961 + L2 LINE L2 2628 3312 -1 405 294 69 0 chr10 22187009 22187169 -118129596 - MLT1K LTR MaLR -64 524 354 2045 137 105 3 chr10 22187228 22187608 -118129157 + MSTB1 LTR MaLR 1 419 -13 748 167 0 36 chr10 22188217 22188355 -118128410 + FLAM_C SINE Alu 1 133 0 396 0 0 0 chr10 22188867 22188911 -118127854 + (TG)n Simple_repeat Simple_repeat 2 45 0 501 262 93 46 chr10 22189775 22190012 -118126753 - MIR SINE MIR -1 261 14 337 234 18 0 chr10 22191170 22191281 -118125484 + (TA)n Simple_repeat Simple_repeat 2 114 0 318 336 48 73 chr10 22196094 22196424 -118120341 + L2 LINE L2 2580 2901 -413 1847 108 62 56 chr10 22197093 22197434 -118119331 + MER61A LTR ERV1 1 343 0 180 284 86 12 chr10 22197486 22197567 -118119198 + L2 LINE L2 3182 3268 -45 219 69 0 0 chr10 22197860 22197889 -118118876 + (T)n Simple_repeat Simple_repeat 1 29 0 275 363 10 0 chr10 22197966 22198068 -118118697 + L2 LINE L2 3170 3272 0 198 0 0 0 chr10 22198386 22198408 -118118357 + (A)n Simple_repeat Simple_repeat 1 22 0 1343 171 65 85 chr10 22198416 22198814 -118117951 - MLT1B LTR MaLR 0 390 1 2240 136 0 0 chr10 22198947 22199288 -118117477 - AluSx SINE Alu 0 345 5 2210 127 0 0 chr10 22199452 22199760 -118117005 - AluSx SINE Alu -4 308 1 794 168 0 29 chr10 22200790 22200927 -118115838 - FLAM_C SINE Alu 0 133 1 296 295 108 29 chr10 22201647 22201786 -118114979 - L2 LINE L2 -2 3270 3121 2242 82 0 7 chr10 22202440 22202743 -118114022 - L1PA8 LINE L1 -4 6168 5868 491 56 0 0 chr10 22202743 22202814 -118113951 + L1P LINE L1 4126 4196 -1950 802 125 307 6 chr10 22203816 22203992 -118112773 - MER30 DNA MER1_type -1 229 1 324 0 0 0 chr10 22204197 22204233 -118112532 + (TG)n Simple_repeat Simple_repeat 1 36 0 1508 162 0 12 chr10 22205223 22205464 -118111301 + AluSg/x SINE Alu 72 309 -1 489 305 84 28 chr10 22205853 22206088 -118110677 - MIR SINE MIR -1 261 14 215 286 25 84 chr10 22206604 22206723 -118110042 - L2 LINE L2 -182 3090 2979 38 18 0 18 chr10 22207463 22207496 -118109269 + AT_rich Low_complexity Low_complexity 1 34 -21 2044 126 0 3 chr10 22207496 22207798 -118108967 - AluSq SINE Alu -12 301 1 38 18 0 18 chr10 22207798 22207820 -118108945 + AT_rich Low_complexity Low_complexity 34 55 0 41242 46 2 1 chr10 22208312 22214460 -118102305 - L1PA4 LINE L1 0 6155 1 267 269 103 0 chr10 22215633 22215711 -118101054 + MIR SINE MIR 104 189 -73 323 310 62 16 chr10 22216779 22216908 -118099857 + L2 LINE L2 3137 3271 -1 725 306 65 32 chr10 22217106 22217537 -118099228 - MLT1J2 LTR MaLR 0 450 6 2193 119 0 13 chr10 22218159 22218462 -118098303 - AluSx SINE Alu -13 299 1 2926 63 0 11 chr10 22219323 22219703 -118097062 - L1PA8 LINE L1 -13 6159 5784 427 326 23 19 chr10 22219747 22219962 -118096803 - L2 LINE L2 -718 2596 2381 1290 323 145 13 chr10 22221222 22221972 -118094793 - L2 LINE L2 -348 2966 2118 2114 118 34 55 chr10 22221985 22222366 -118094399 - L1PB4 LINE L1 -2 6154 5782 183 42 0 0 chr10 22222635 22222659 -118094106 + (TA)n Simple_repeat Simple_repeat 2 25 0 1161 109 3 6 chr10 22222663 22222864 -118093901 - L1PB4 LINE L1 -376 5780 5577 753 254 52 86 chr10 22222933 22223319 -118093446 - L2 LINE L2 -1479 1835 1463 489 226 0 0 chr10 22223552 22223654 -118093111 + Charlie5 DNA MER1_type 5 106 -2506 1041 156 171 27 chr10 22223662 22223996 -118092769 + Charlie5 DNA MER1_type 2234 2615 0 400 256 72 8 chr10 22224092 22224217 -118092548 - MIR SINE MIR -126 136 4 22 35 0 0 chr10 22224608 22224637 -118092128 + AT_rich Low_complexity Low_complexity 1 29 0 250 290 134 46 chr10 22224661 22224899 -118091866 + L2 LINE L2 2315 2573 -741 225 0 0 0 chr10 22227475 22227500 -118089265 + (T)n Simple_repeat Simple_repeat 1 25 0 622 226 226 0 chr10 22227629 22227806 -118088959 - MER20 DNA MER1_type 0 219 3 2239 100 37 7 chr10 22228217 22228517 -118088248 - AluSc SINE Alu 0 309 1 1972 158 7 0 chr10 22228547 22228857 -118087908 + AluJb SINE Alu 1 312 0 448 291 61 27 chr10 22229284 22229432 -118087333 + L3b LINE CR1 1415 1567 -16 220 263 42 111 chr10 22229581 22229771 -118086994 - MIR SINE MIR -66 196 20 251 282 0 24 chr10 22229977 22230062 -118086703 + (TATG)n Simple_repeat Simple_repeat 1 83 0 660 199 75 0 chr10 22231383 22231569 -118085196 - LTR37A LTR ERV1 -2 424 225 777 152 85 12 chr10 22231619 22231784 -118084981 + MER44D DNA MER2_type 1 447 -162 4627 133 21 9 chr10 22231810 22232622 -118084143 - L1PB3 LINE L1 -2 6152 5331 852 140 13 20 chr10 22232622 22232772 -118083993 + MER44D DNA MER2_type 456 604 -1 410 211 73 9 chr10 22232775 22232884 -118083881 - LTR37A LTR ERV1 -259 167 52 2426 60 0 13 chr10 22233409 22233707 -118083058 - AluY SINE Alu -17 294 1 28 29 0 0 chr10 22234274 22234309 -118082456 + AT_rich Low_complexity Low_complexity 1 35 0 2190 79 3 51 chr10 22234791 22234959 -118081806 - AluSg SINE Alu -10 300 152 2060 116 3 67 chr10 22234959 22235287 -118081478 - AluSx SINE Alu -5 307 1 2190 79 3 51 chr10 22235287 22235433 -118081332 - AluSg SINE Alu -158 152 1 185 325 145 0 chr10 22235482 22235565 -118081200 - MIR SINE MIR -130 132 38 323 224 132 0 chr10 22236044 22236120 -118080645 + L2 LINE L2 3186 3271 -1 286 329 74 20 chr10 22236134 22236283 -118080482 + MIR3 SINE MIR 50 206 -2 207 114 0 0 chr10 22237044 22237079 -118079686 + (ATTAG)n Simple_repeat Simple_repeat 4 38 0 380 261 7 43 chr10 22237096 22237234 -118079531 + MER103 DNA DNA 23 155 -11 28 0 0 0 chr10 22238587 22238615 -118078150 + AT_rich Low_complexity Low_complexity 1 28 0 216 255 0 0 chr10 22238649 22238700 -118078065 + GA-rich Low_complexity Low_complexity 3 53 0 326 298 101 38 chr10 22238928 22239086 -118077679 - MIR3 SINE MIR -11 197 30 327 49 0 0 chr10 22239311 22239352 -118077413 + (TA)n Simple_repeat Simple_repeat 1 41 0 372 261 292 5 chr10 22239796 22239991 -118076774 + MIR SINE MIR 12 262 0 180 111 0 0 chr10 22240228 22240255 -118076510 + (CAA)n Simple_repeat Simple_repeat 3 29 0 364 283 15 4 chr10 22240305 22240432 -118076333 - MIR SINE MIR -63 145 43 2348 63 0 47 chr10 22240878 22241196 -118075569 - AluY SINE Alu -8 303 1 1675 191 7 10 chr10 22241288 22241640 -118075125 - AluJb SINE Alu 0 351 1 261 295 6 90 chr10 22241666 22241822 -118074943 - L3 LINE CR1 -406 1171 1029 180 254 79 95 chr10 22242107 22242233 -118074532 - L3 LINE CR1 -864 713 590 313 209 110 68 chr10 22243255 22243446 -118073319 - MLT1J LTR MaLR 0 511 313 1797 180 7 0 chr10 22248112 22248417 -118068348 + AluJb SINE Alu 1 307 -5 403 306 9 0 chr10 22248808 22248916 -118067849 + L2 LINE L2 3201 3309 -4 829 233 60 23 chr10 22249012 22249227 -118067538 - MIR SINE MIR -37 225 3 2114 112 0 20 chr10 22249289 22249584 -118067181 - AluSx SINE Alu -19 293 5 1003 50 14 50 chr10 22249639 22249780 -118066985 - L1PA10 LINE L1 -8 6160 6025 297 278 104 26 chr10 22250948 22251063 -118065702 + L3 LINE CR1 1386 1509 -68 813 152 0 0 chr10 22251452 22251577 -118065188 + FLAM_C SINE Alu 1 125 -8 353 331 211 20 chr10 22252432 22253033 -118063732 + L3 LINE CR1 760 1475 -102 331 279 125 0 chr10 22253244 22253348 -118063417 - L2 LINE L2 0 3272 3156 26 0 0 0 chr10 22253366 22253392 -118063373 + AT_rich Low_complexity Low_complexity 1 26 0 499 207 35 12 chr10 22253472 22253641 -118063124 + CT-rich Low_complexity Low_complexity 2 174 0 957 198 202 4 chr10 22253645 22253897 -118062868 - AluJo SINE Alu 0 302 1 326 218 128 0 chr10 22254061 22254139 -118062626 - L2 LINE L2 0 3272 3185 185 309 49 25 chr10 22255202 22255283 -118061482 - L2 LINE L2 -16 3256 3174 2145 120 0 0 chr10 22255449 22255748 -118061017 - AluSg1 SINE Alu -10 299 1 310 266 203 16 chr10 22256473 22256601 -118060164 - MIR SINE MIR -1 261 110 2988 167 14 61 chr10 22257796 22258438 -118058327 - LTR9 LTR ERV1 0 612 1 580 293 47 16 chr10 22258456 22258647 -118058118 + MIR SINE MIR 28 224 -38 22 35 0 0 chr10 22259717 22259746 -118057019 + AT_rich Low_complexity Low_complexity 1 29 0 297 0 0 0 chr10 22260077 22260110 -118056655 + (GCTG)n Simple_repeat Simple_repeat 2 34 0 425 299 16 16 chr10 22260331 22260458 -118056307 - MLT2E LTR ERVL -472 156 30 2035 152 3 3 chr10 22260790 22261093 -118055672 + AluSx SINE Alu 1 303 -9 721 294 112 42 chr10 22261109 22261581 -118055184 - MLT1K LTR MaLR -7 581 77 328 255 27 34 chr10 22261936 22262085 -118054680 + L1M4 LINE L1 4498 4645 -1501 212 167 21 0 chr10 22262317 22262365 -118054400 + CT-rich Low_complexity Low_complexity 3 51 0 3987 89 11 2 chr10 22262750 22263299 -118053466 - MER41A LTR ERV1 0 554 1 260 303 28 49 chr10 22264453 22264595 -118052170 + MER5A DNA MER1_type 23 161 -28 2210 116 3 0 chr10 22265483 22265784 -118050981 - AluSx SINE Alu -10 302 1 279 0 0 0 chr10 22267487 22267518 -118049247 + (CA)n Simple_repeat Simple_repeat 2 32 0 672 323 30 31 chr10 22267608 22268211 -118048554 + L1ME LINE L1 4456 5057 -1089 21 0 0 0 chr10 22268793 22268814 -118047951 + AT_rich Low_complexity Low_complexity 1 21 0 290 291 23 46 chr10 22268918 22269093 -118047672 + L1ME LINE L1 5296 5466 -696 1047 175 0 5 chr10 22269423 22269617 -118047148 - L1MB3 LINE L1 -1 6182 5990 1013 250 9 22 chr10 22270323 22270551 -118046214 + MIR SINE MIR 12 236 -26 215 327 183 27 chr10 22271865 22272128 -118044637 + L2 LINE L2 2941 3244 -69 638 87 0 48 chr10 22272841 22272944 -118043821 + L1MA2 LINE L1 6207 6304 0 22 0 0 0 chr10 22272944 22272966 -118043799 + AT_rich Low_complexity Low_complexity 1 22 0 1927 197 20 0 chr10 22273642 22273993 -118042772 + MER47A DNA MER2_type 2 359 -7 2129 87 0 7 chr10 22274350 22274627 -118042138 + AluY SINE Alu 1 275 -36 213 39 0 0 chr10 22275241 22275267 -118041498 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 22276260 22276290 -118040475 + AT_rich Low_complexity Low_complexity 1 30 0 190 226 179 24 chr10 22276423 22276507 -118040258 + MIR SINE MIR 152 248 -14 728 260 113 17 chr10 22276814 22277045 -118039720 + MIR SINE MIR 8 260 -2 187 323 46 0 chr10 22278374 22278439 -118038326 - L2 LINE L2 -19 3253 3186 1817 142 53 0 chr10 22278706 22278987 -118037778 + AluSq SINE Alu 1 296 -17 40 0 0 0 chr10 22278994 22279034 -118037731 + AT_rich Low_complexity Low_complexity 1 40 0 183 42 0 0 chr10 22280294 22280318 -118036447 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2081 93 7 27 chr10 22280586 22280886 -118035879 - AluSc SINE Alu -15 294 1 1947 162 3 0 chr10 22280964 22281267 -118035498 + AluJo SINE Alu 1 304 -8 22 0 0 0 chr10 22281760 22281782 -118034983 + AT_rich Low_complexity Low_complexity 1 22 0 1833 176 11 11 chr10 22281786 22282138 -118034627 - L1MA3 LINE L1 0 6305 5954 552 178 0 0 chr10 22282138 22282228 -118034537 - AluJo SINE Alu -127 185 96 1529 75 0 0 chr10 22282228 22282429 -118034336 - L1MA3 LINE L1 -370 5935 5735 180 217 0 0 chr10 22282747 22282793 -118033972 + T-rich Low_complexity Low_complexity 4 49 0 1153 242 114 31 chr10 22283750 22284035 -118032730 - Charlie2 DNA MER1_type -28 2834 2574 2211 90 0 37 chr10 22284035 22284335 -118032430 - AluSg SINE Alu -21 289 1 1153 242 114 31 chr10 22284335 22284603 -118032162 - Charlie2 DNA MER1_type -288 2574 2235 540 207 36 21 chr10 22284637 22284777 -118031988 - Charlie2a DNA MER1_type -1808 1054 913 386 289 56 41 chr10 22285509 22285706 -118031059 + MIR3 SINE MIR 8 207 -1 358 330 0 0 chr10 22285839 22285939 -118030826 - MIR SINE MIR -6 256 157 1824 175 25 28 chr10 22286061 22286456 -118030309 - MSTD LTR MaLR 0 396 3 2026 144 6 54 chr10 22287022 22287376 -118029389 - MER1B DNA MER1_type 0 337 1 1674 95 4 4 chr10 22287810 22288053 -118028712 - MER75B DNA T2_type 0 243 1 21 0 0 0 chr10 22288645 22288666 -118028099 + AT_rich Low_complexity Low_complexity 1 21 0 224 165 68 29 chr10 22291401 22291504 -118025261 + (TA)n Simple_repeat Simple_repeat 2 108 0 1737 148 62 3 chr10 22291816 22292140 -118024625 + L1MA5 LINE L1 5958 6300 0 1537 245 33 6 chr10 22292460 22292823 -118023942 - MLT1A2 LTR MaLR 0 374 2 1914 169 54 3 chr10 22292830 22293221 -118023544 + L1MA7 LINE L1 5869 6279 -12 21 36 0 0 chr10 22293232 22293260 -118023505 + AT_rich Low_complexity Low_complexity 1 28 0 210 370 9 9 chr10 22293482 22293590 -118023175 - MIR SINE MIR -64 144 37 517 246 152 16 chr10 22293988 22294179 -118022586 + MLT1K LTR MaLR 360 576 -12 249 108 0 0 chr10 22294181 22294218 -118022547 + (CAT)n Simple_repeat Simple_repeat 1 37 0 243 146 0 0 chr10 22295701 22295742 -118021023 + (ATG)n Simple_repeat Simple_repeat 1 41 0 751 315 94 26 chr10 22295744 22296128 -118020637 - MLT1K LTR MaLR -12 576 167 11247 118 25 11 chr10 22296782 22298939 -118017826 - Tigger1 DNA MER2_type 0 2418 294 2212 143 6 3 chr10 22298939 22299281 -118017484 - MER61A LTR ERV1 0 343 1 11247 118 25 11 chr10 22299281 22299306 -118017459 - Tigger1 DNA MER2_type -2124 294 271 2191 103 7 0 chr10 22299306 22299598 -118017167 + AluSx SINE Alu 1 294 -18 11247 118 25 11 chr10 22299598 22299791 -118016974 - Tigger1 DNA MER2_type -2147 271 1 313 206 137 0 chr10 22299792 22299865 -118016900 - MIR SINE MIR -109 153 71 245 163 0 0 chr10 22301331 22301374 -118015391 - MLT1L LTR MaLR -428 187 145 272 271 336 11 chr10 22301777 22302039 -118014726 + L2 LINE L2 2316 2662 -652 840 65 0 0 chr10 22302047 22302154 -118014611 - AluY SINE Alu -4 307 201 254 327 29 29 chr10 22302162 22302266 -118014499 + L2 LINE L2 2670 2773 -541 265 220 0 0 chr10 22302538 22302588 -118014177 + MLT1I LTR MaLR 94 143 -266 322 143 0 32 chr10 22302647 22302710 -118014055 + MLT1F1 LTR MaLR 507 567 0 230 271 79 57 chr10 22303342 22303482 -118013283 - MLT1K LTR MaLR -5 583 441 809 104 0 37 chr10 22304893 22305027 -118011738 - FRAM SINE Alu -2 174 46 3380 18 0 0 chr10 22306232 22306617 -118010148 - L1PA3 LINE L1 -3 6152 5768 624 296 188 0 chr10 22306619 22306832 -118009933 + MIR SINE MIR 3 255 -7 192 135 0 0 chr10 22307026 22307063 -118009702 + (TC)n Simple_repeat Simple_repeat 2 38 0 249 139 0 0 chr10 22307096 22307139 -118009626 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 3349 73 4 0 chr10 22307738 22308192 -118008573 - L1PA13 LINE L1 -1 6162 5707 2041 120 10 33 chr10 22310149 22310449 -118006316 - AluSx SINE Alu -14 298 6 1125 157 25 5 chr10 22312842 22313040 -118003725 + L1PB4 LINE L1 5954 6155 -1 353 182 13 57 chr10 22313107 22313266 -118003499 + (TA)n Simple_repeat Simple_repeat 1 152 0 265 255 0 11 chr10 22313377 22313456 -118003309 + (TA)n Simple_repeat Simple_repeat 2 81 -13 192 97 0 0 chr10 22313456 22313487 -118003278 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 265 255 0 11 chr10 22313487 22313501 -118003264 + (TA)n Simple_repeat Simple_repeat 81 94 0 226 225 141 14 chr10 22313692 22313763 -118003002 - MIR SINE MIR -1 261 182 406 233 53 48 chr10 22314180 22314386 -118002379 - MER113 DNA MER1_type? -309 212 6 249 341 59 30 chr10 22314401 22314536 -118002229 + MIR3 SINE MIR 8 146 -62 2178 133 3 0 chr10 22314976 22315285 -118001480 - AluSx SINE Alu -2 310 1 24 0 0 0 chr10 22315741 22315765 -118001000 + AT_rich Low_complexity Low_complexity 1 24 0 952 162 0 0 chr10 22315943 22316091 -118000674 + AluJb SINE Alu 140 287 -25 180 0 0 0 chr10 22316094 22316114 -118000651 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1789 112 35 14 chr10 22316475 22316761 -118000004 + L1PA13 LINE L1 5859 6150 -13 293 375 50 0 chr10 22317049 22317169 -117999596 - L2 LINE L2 -1 3271 3146 234 230 163 96 chr10 22317382 22317560 -117999205 - MIR SINE MIR -21 241 52 1813 160 45 0 chr10 22318442 22318729 -117998036 - AluSx SINE Alu -10 302 3 1850 168 3 0 chr10 22319761 22320053 -117996712 + AluJb SINE Alu 1 293 -19 327 49 0 0 chr10 22321188 22321229 -117995536 + (TG)n Simple_repeat Simple_repeat 2 42 0 1300 201 42 50 chr10 22321229 22321512 -117995253 - AluJo SINE Alu -18 284 4 492 195 47 8 chr10 22322260 22322388 -117994377 - L1MB7 LINE L1 0 6184 6052 26 30 0 0 chr10 22322549 22322582 -117994183 + AT_rich Low_complexity Low_complexity 1 33 0 33 25 0 0 chr10 22322625 22322665 -117994100 + AT_rich Low_complexity Low_complexity 1 40 0 1463 49 6 0 chr10 22323324 22323507 -117993258 + L1PA5 LINE L1 5971 6154 0 191 254 0 36 chr10 22324438 22324493 -117992272 + L2 LINE L2 2757 2809 -505 693 189 172 18 chr10 22324836 22325005 -117991760 + MIR SINE MIR 63 257 -5 23 0 0 0 chr10 22327747 22327770 -117988995 + AT_rich Low_complexity Low_complexity 1 23 0 1780 154 11 3 chr10 22328499 22328785 -117987980 - AluSx SINE Alu -24 288 1 410 294 25 103 chr10 22329047 22329407 -117987358 - L2 LINE L2 0 3272 2941 2164 128 0 0 chr10 22329962 22330258 -117986507 - AluSx SINE Alu -16 296 1 1489 289 51 46 chr10 22330521 22331225 -117985540 + L2 LINE L2 2287 2992 -321 569 290 159 12 chr10 22331540 22331792 -117984973 + L2 LINE L2 3024 3312 -1 34 24 0 0 chr10 22331830 22331871 -117984894 + AT_rich Low_complexity Low_complexity 1 41 0 234 0 0 0 chr10 22331990 22332016 -117984749 + (TA)n Simple_repeat Simple_repeat 2 27 0 1563 121 12 0 chr10 22332428 22332677 -117984088 - L1MA5A LINE L1 -6 6291 6040 192 343 48 19 chr10 22332786 22332891 -117983874 + MIR SINE MIR 30 137 -71 243 368 140 0 chr10 22334147 22334261 -117982504 - L2 LINE L2 -6 3307 3178 1908 146 54 0 chr10 22334332 22334626 -117982139 + AluSx SINE Alu 1 310 -2 3014 202 39 44 chr10 22335216 22335879 -117980886 + L1MA9 LINE L1 5514 6174 -138 225 0 0 0 chr10 22335879 22335904 -117980861 + (CA)n Simple_repeat Simple_repeat 1 25 0 3014 202 39 44 chr10 22335904 22336013 -117980752 + L1MA9 LINE L1 6174 6282 -30 1874 152 0 0 chr10 22336390 22336673 -117980092 + AluSx SINE Alu 18 300 -12 1432 184 10 30 chr10 22337702 22338006 -117978759 - AluJo SINE Alu -9 303 6 2164 102 16 16 chr10 22339434 22339747 -117977018 - AluSq SINE Alu 0 313 1 182 114 0 29 chr10 22340247 22340282 -117976483 + (CA)n Simple_repeat Simple_repeat 2 35 0 300 338 90 8 chr10 22340778 22340911 -117975854 + MIR SINE MIR 4 147 -115 376 172 75 0 chr10 22341236 22341329 -117975436 + L1MB4 LINE L1 6078 6177 -3 1961 159 0 6 chr10 22341973 22342287 -117974478 + AluJb SINE Alu 1 312 0 2138 119 7 10 chr10 22343006 22343309 -117973456 - AluSq SINE Alu -11 302 1 273 119 0 0 chr10 22343663 22343705 -117973060 + (T)n Simple_repeat Simple_repeat 1 42 0 224 294 98 29 chr10 22343842 22343944 -117972821 + MIR SINE MIR 110 218 -44 1561 199 34 0 chr10 22344140 22344436 -117972329 + AluJo SINE Alu 6 311 -1 2170 103 10 3 chr10 22345198 22345498 -117971267 - AluSx SINE Alu 0 312 11 229 156 0 0 chr10 22345848 22345893 -117970872 + LTR66 LTR ERVL 394 438 -172 285 190 0 25 chr10 22345896 22345975 -117970790 + L1MC4 LINE L1 6624 6700 -1342 1520 187 21 21 chr10 22345978 22346262 -117970503 - AluJo SINE Alu -27 285 2 21 0 0 0 chr10 22346524 22346545 -117970220 + AT_rich Low_complexity Low_complexity 1 21 0 231 242 16 0 chr10 22346832 22346894 -117969871 - MIR SINE MIR -12 250 188 207 406 28 0 chr10 22349072 22349178 -117967587 - L3 LINE CR1 -19 1558 1450 1920 128 34 52 chr10 22356272 22356654 -117960111 + THE1C LTR MaLR 1 375 0 1425 189 91 8 chr10 22357846 22358111 -117958654 - AluJo SINE Alu -25 287 1 196 313 0 16 chr10 22358638 22358702 -117958063 - L2 LINE L2 0 3272 3210 1926 151 3 16 chr10 22361896 22362207 -117954558 - AluJo SINE Alu -5 307 1 1971 94 28 0 chr10 22362517 22362803 -117953962 + L1PB1 LINE L1 5856 6149 -2 331 265 102 20 chr10 22362830 22363026 -117953739 - L1ME LINE L1 -410 5711 5500 526 264 0 0 chr10 22363125 22363254 -117953511 - L1ME LINE L1 -505 5616 5488 2150 194 14 14 chr10 22363386 22363808 -117952957 - MSTB LTR MaLR -4 422 1 1663 155 47 6 chr10 22363947 22364264 -117952501 - MLT1B LTR MaLR -60 330 1 2378 154 32 11 chr10 22364265 22364701 -117952064 - MER65A LTR ERV1 0 445 1 1716 158 7 7 chr10 22364735 22365014 -117951751 + AluSx SINE Alu 29 307 -5 415 264 50 43 chr10 22365114 22365254 -117951511 - MIR3 SINE MIR -65 143 3 232 260 40 110 chr10 22366215 22366315 -117950450 + L2 LINE L2 3202 3294 -19 775 360 61 32 chr10 22368422 22368947 -117947818 + L3 LINE CR1 7 546 -1031 351 261 78 9 chr10 22369292 22369522 -117947243 + L1M4 LINE L1 4397 4642 -1504 3124 209 44 27 chr10 22369884 22370259 -117946506 - L1MD1 LINE L1 0 6242 5875 828 217 19 0 chr10 22370259 22370420 -117946345 - FRAM SINE Alu -2 164 1 3124 209 44 27 chr10 22370420 22371719 -117945046 - L1MD1 LINE L1 -367 5875 4516 2242 250 56 7 chr10 22371721 22372489 -117944276 - L1MD1 LINE L1 -1794 4352 3547 212 337 61 10 chr10 22372584 22372682 -117944083 + L3 LINE CR1 678 780 -797 * 783 263 75 94 chr10 22372680 22373136 -117943629 + L2 LINE L2 2867 3313 0 2179 117 0 3 chr10 22373190 22373497 -117943268 + AluSc SINE Alu 1 306 -3 647 312 163 35 chr10 22373550 22374172 -117942593 - L2 LINE L2 -52 3261 2568 315 303 37 0 chr10 22374341 22374450 -117942315 + MIR SINE MIR 63 175 -87 611 306 65 25 chr10 22374454 22374810 -117941955 + MLT1J LTR MaLR 1 370 -141 317 361 19 0 chr10 22375099 22375207 -117941558 + L3 LINE CR1 1097 1206 -371 196 226 161 58 chr10 22376344 22376499 -117940266 + L2 LINE L2 3130 3300 -13 3783 163 75 27 chr10 22376507 22378086 -117938679 - L1MA8 LINE L1 -12 6279 4632 40900 32 22 1 chr10 22378134 22384194 -117932571 + L1PA2 LINE L1 2 6189 0 6367 163 38 12 chr10 22384223 22384525 -117932240 - L1MA8 LINE L1 -1518 4628 4335 1806 169 3 7 chr10 22384525 22384826 -117931939 - AluJb SINE Alu -12 300 1 6367 163 38 12 chr10 22384826 22385861 -117930904 - L1MA8 LINE L1 -1811 4335 3256 359 247 54 32 chr10 22386104 22386197 -117930568 + MIR SINE MIR 34 128 -134 443 334 13 5 chr10 22386847 22387032 -117929733 + MIR3 SINE MIR 15 200 -8 368 278 35 77 chr10 22387232 22387401 -117929364 + MLT1J LTR MaLR 258 419 -92 574 319 47 14 chr10 22388086 22388299 -117928466 + MIR SINE MIR 5 224 -38 2014 157 0 23 chr10 22388988 22389333 -117927432 - MER1B DNA MER1_type 0 337 1 211 237 105 26 chr10 22389471 22389547 -117927218 + MIR SINE MIR 181 262 0 231 339 150 0 chr10 22389548 22389675 -117927090 + L3b LINE CR1 1168 1313 -270 502 152 50 0 chr10 22390383 22390482 -117926283 - MER5A DNA MER1_type -77 112 9 2223 142 19 39 chr10 22392921 22393312 -117923453 + MER57A LTR ERV1 1 385 -18 2022 141 3 3 chr10 22393312 22393617 -117923148 - AluSx SINE Alu -7 305 1 2223 142 19 39 chr10 22393617 22393635 -117923130 + MER57A LTR ERV1 385 402 -1 195 381 39 35 chr10 22393664 22393895 -117922870 + L2 LINE L2 2828 3059 -213 2294 114 22 13 chr10 22394210 22394581 -117922184 - THE1B LTR MaLR 0 364 1 229 345 23 11 chr10 22394949 22395036 -117921729 - MIR SINE MIR -80 128 41 204 365 32 32 chr10 22395971 22396097 -117920668 - L2 LINE L2 -20 3293 3168 3194 143 55 74 chr10 22396274 22396978 -117919787 + LTR8 LTR ERV1 1 691 0 1154 225 171 7 chr10 22397047 22397487 -117919278 + L1M4 LINE L1 4382 4893 -1253 255 220 0 0 chr10 22397540 22397590 -117919175 - MIR SINE MIR -134 128 79 1926 162 42 0 chr10 22398446 22398779 -117917986 - MER7A DNA MER2_type -1 345 1 315 317 50 31 chr10 22398803 22398964 -117917801 - MIR3 SINE MIR -3 205 42 766 321 116 11 chr10 22400153 22400601 -117916164 + LTR33 LTR ERVL 5 499 -22 1732 144 3 75 chr10 22400720 22401039 -117915726 - AluSq SINE Alu -17 296 1 785 191 8 0 chr10 22401146 22401277 -117915488 - FLAM_A SINE Alu -1 132 1 2316 108 0 0 chr10 22402187 22402484 -117914281 + AluSc SINE Alu 1 297 -12 807 287 150 18 chr10 22403831 22404218 -117912547 - MLT1G3 LTR MaLR 0 530 93 990 204 58 64 chr10 22404235 22404563 -117912202 - L1M4 LINE L1 -5176 1366 1041 1032 214 0 5 chr10 22404563 22404750 -117912015 + AluJb SINE Alu 122 307 -5 3519 226 43 37 chr10 22404762 22405753 -117911012 - L1M4 LINE L1 -5544 998 2 * 4872 274 80 17 chr10 22405746 22407845 -117908920 - L1MEc LINE L1 -3991 2405 176 333 297 74 48 chr10 22408072 22408301 -117908464 - L2 LINE L2 0 3313 3079 327 377 27 27 chr10 22408816 22408962 -117907803 - L2 LINE L2 0 3272 3127 631 265 29 0 chr10 22409427 22409597 -117907168 - MER5B DNA MER1_type 0 178 4 1327 231 105 43 chr10 22409600 22410020 -117906745 + MLT2B1 LTR ERVL 1 446 -74 339 25 0 0 chr10 22410022 22410062 -117906703 + (CA)n Simple_repeat Simple_repeat 2 41 0 348 227 0 0 chr10 22411009 22411097 -117905668 + (CA)n Simple_repeat Simple_repeat 1 88 0 213 39 0 0 chr10 22411359 22411385 -117905380 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 2023 145 0 7 chr10 22411385 22411671 -117905094 - AluSx SINE Alu -26 286 1 342 194 0 0 chr10 22412359 22412421 -117904344 - MLT1A2 LTR MaLR 0 374 313 1201 99 0 0 chr10 22412422 22412574 -117904191 - FRAM SINE Alu -3 173 22 216 200 0 0 chr10 22413923 22413968 -117902797 + GA-rich Low_complexity Low_complexity 2 46 0 182 329 0 43 chr10 22414125 22414195 -117902570 + MIR SINE MIR 74 140 -68 276 30 0 0 chr10 22414757 22414790 -117901975 + (TG)n Simple_repeat Simple_repeat 1 33 0 197 136 0 45 chr10 22416288 22416332 -117900433 + (GGGA)n Simple_repeat Simple_repeat 2 43 0 253 150 0 33 chr10 22416386 22416446 -117900319 + (GGGAA)n Simple_repeat Simple_repeat 4 61 0 615 234 0 0 chr10 22417891 22418175 -117898590 + (TG)n Simple_repeat Simple_repeat 1 284 0 444 264 0 0 chr10 22418196 22418370 -117898395 + (TG)n Simple_repeat Simple_repeat 2 175 0 190 218 36 55 chr10 22418535 22418590 -117898175 + MIR SINE MIR 91 144 -118 468 51 0 0 chr10 22419122 22419181 -117897584 + (TG)n Simple_repeat Simple_repeat 2 60 0 309 26 0 0 chr10 22421745 22421783 -117894982 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 636 164 0 0 chr10 22422208 22422385 -117894380 + (CA)n Simple_repeat Simple_repeat 2 178 0 321 293 6 19 chr10 22426104 22426261 -117890504 + CT-rich Low_complexity Low_complexity 1 155 0 276 30 0 0 chr10 22427879 22427912 -117888853 + (TG)n Simple_repeat Simple_repeat 1 33 0 204 115 19 39 chr10 22428352 22428404 -117888361 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 745 121 23 23 chr10 22428728 22428902 -117887863 + (TG)n Simple_repeat Simple_repeat 2 175 0 363 196 14 28 chr10 22428972 22429115 -117887650 + (TG)n Simple_repeat Simple_repeat 2 142 0 21 36 0 0 chr10 22429639 22429667 -117887098 + AT_rich Low_complexity Low_complexity 1 28 0 630 26 0 0 chr10 22432193 22432269 -117884496 + (TC)n Simple_repeat Simple_repeat 2 77 0 294 345 76 12 chr10 22433056 22433227 -117883538 + MLT1B LTR MaLR 1 182 -208 354 123 0 0 chr10 22433458 22433515 -117883250 + (CA)n Simple_repeat Simple_repeat 1 57 0 357 125 0 0 chr10 22434786 22434842 -117881923 + (CTG)n Simple_repeat Simple_repeat 1 56 0 357 221 95 11 chr10 22434888 22434983 -117881782 - AluSq/x SINE Alu -198 105 3 231 114 0 0 chr10 22437444 22437488 -117879277 + (TC)n Simple_repeat Simple_repeat 1 44 0 192 111 0 0 chr10 22437494 22437530 -117879235 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 333 0 0 0 chr10 22438590 22438627 -117878138 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 193 316 63 13 chr10 22438817 22438896 -117877869 + MIR SINE MIR 63 145 -117 5027 119 26 11 chr10 22439765 22440574 -117876191 + L1PA16 LINE L1 5337 6157 -9 47 19 0 0 chr10 22440574 22440628 -117876137 + AT_rich Low_complexity Low_complexity 1 54 0 2305 98 3 13 chr10 22440678 22440983 -117875782 + AluSx SINE Alu 1 302 -10 545 218 78 57 chr10 22441023 22441354 -117875411 + L1MEd LINE L1 771 1108 -5011 303 220 213 43 chr10 22442513 22442654 -117874111 - MIR3 SINE MIR -26 182 18 304 269 39 0 chr10 22443630 22443708 -117873057 + MIR SINE MIR 63 143 -119 22 70 0 0 chr10 22444477 22444520 -117872245 + GC_rich Low_complexity Low_complexity 1 43 0 211 313 0 0 chr10 22446118 22446166 -117870599 + polypyrimidine Low_complexity Low_complexity 1 48 0 405 0 0 0 chr10 22446589 22446634 -117870131 + (CA)n Simple_repeat Simple_repeat 2 46 0 248 295 21 11 chr10 22446801 22446896 -117869869 - MIR SINE MIR -107 155 60 1007 138 0 6 chr10 22447104 22447285 -117869480 + (TATG)n Simple_repeat Simple_repeat 1 180 0 232 261 76 34 chr10 22447301 22447420 -117869345 - AluSg SINE Alu -176 124 1 255 310 0 14 chr10 22449625 22449696 -117867069 - L2 LINE L2 -62 3251 3182 914 201 5 31 chr10 22449711 22449905 -117866860 + AluJo SINE Alu 124 312 0 2298 102 3 0 chr10 22450122 22450415 -117866350 - AluSx SINE Alu -18 294 1 270 325 0 0 chr10 22451322 22451338 -117865427 + AluSp SINE Alu 120 135 -168 1675 164 3 50 chr10 22451338 22451656 -117865109 + AluJo SINE Alu 1 303 -9 273 286 247 19 chr10 22452750 22452904 -117863861 + MIR3 SINE MIR 14 202 -6 1907 156 3 31 chr10 22453457 22453778 -117862987 + AluJo SINE Alu 1 312 0 227 145 58 0 chr10 22455058 22455127 -117861638 + (TA)n Simple_repeat Simple_repeat 1 73 0 1001 142 12 6 chr10 22455144 22455313 -117861452 - MER44D DNA MER2_type 0 705 536 1603 53 61 0 chr10 22455313 22455541 -117861224 - L1P5 LINE L1 -597 5554 5313 292 151 0 0 chr10 22455530 22455583 -117861182 + L1PB1 LINE L1 6095 6147 -4 * 930 131 95 12 chr10 22455600 22455768 -117860997 - MER44D DNA MER2_type -157 452 1 352 264 31 8 chr10 22455768 22455897 -117860868 + (TA)n Simple_repeat Simple_repeat 1 132 0 429 325 30 22 chr10 22457633 22457976 -117858789 + L1MC4a LINE L1 5561 5818 -303 32 43 0 0 chr10 22458230 22458276 -117858489 + AT_rich Low_complexity Low_complexity 1 46 0 1744 157 25 7 chr10 22458277 22458558 -117858207 - AluJo SINE Alu -26 286 1 305 219 96 102 chr10 22459132 22459278 -117857487 + MER5A DNA MER1_type 1 147 -42 2366 75 3 0 chr10 22459278 22459572 -117857193 - AluY SINE Alu -16 295 1 305 219 96 102 chr10 22459572 22459612 -117857153 + MER5A DNA MER1_type 147 186 -3 21 0 0 0 chr10 22459710 22459731 -117857034 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22460987 22461007 -117855758 + (A)n Simple_repeat Simple_repeat 1 20 0 2152 133 128 8 chr10 22461125 22461507 -117855258 + MSTA LTR MaLR 1 428 0 982 47 78 0 chr10 22462230 22462358 -117854407 + MER85 DNA T2_type 2 139 0 1273 221 27 48 chr10 22464023 22464084 -117852681 - MLT1A1 LTR MaLR -2 363 302 2069 156 0 3 chr10 22464084 22464391 -117852374 - AluJo SINE Alu -6 306 1 1273 221 27 48 chr10 22464391 22464700 -117852065 - MLT1A1 LTR MaLR -63 302 1 366 342 12 0 chr10 22464711 22464872 -117851893 - L1ME LINE L1 -426 5744 5582 237 261 11 0 chr10 22464890 22464982 -117851783 - L1ME LINE L1 -2379 5429 5337 22 0 0 0 chr10 22464996 22465018 -117851747 + AT_rich Low_complexity Low_complexity 1 22 0 246 277 62 45 chr10 22465192 22465416 -117851349 - L1ME LINE L1 -2300 3846 3619 796 168 0 0 chr10 22465895 22466026 -117850739 + FLAM_C SINE Alu 3 133 0 201 39 0 0 chr10 22466040 22466066 -117850699 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6236 53 8 0 chr10 22466326 22467167 -117849598 + L1P LINE L1 4492 5339 -807 474 262 78 48 chr10 22467287 22467528 -117849237 - L1ME LINE L1 -3324 2822 2590 1337 200 84 26 chr10 22467528 22467873 -117848892 + MLT1A1 LTR MaLR 1 365 0 474 262 78 48 chr10 22467873 22468180 -117848585 - L1ME LINE L1 -3556 2590 2252 2009 147 13 10 chr10 22468180 22468486 -117848279 - AluSx SINE Alu -5 307 1 474 262 78 48 chr10 22468486 22468524 -117848241 - L1ME LINE L1 -3894 2252 2217 663 252 143 47 chr10 22469203 22469837 -117846928 + HAL1 LINE L1 1672 2366 -141 341 179 45 8 chr10 22470314 22470448 -117846317 + CT-rich Low_complexity Low_complexity 3 141 0 360 0 0 0 chr10 22470648 22470688 -117846077 + (TTA)n Simple_repeat Simple_repeat 2 41 0 40900 34 23 1 chr10 22520782 22526419 -117790346 - L1P1 LINE L1 -389 5766 2 3129 178 27 0 chr10 22526467 22527124 -117789641 + L1MA8 LINE L1 4632 5306 -840 3517 162 87 45 chr10 22527297 22528222 -117788543 + L1MA8 LINE L1 5317 6279 -12 196 226 161 58 chr10 22528230 22528385 -117788380 - L2 LINE L2 -13 3300 3130 317 361 19 0 chr10 22529522 22529630 -117787135 - L3 LINE CR1 -371 1206 1097 611 306 65 25 chr10 22529919 22530275 -117786490 - MLT1J LTR MaLR -141 370 1 315 303 37 0 chr10 22530279 22530388 -117786377 - MIR SINE MIR -87 175 63 647 312 163 35 chr10 22530557 22531179 -117785586 + L2 LINE L2 2568 3261 -52 2179 117 0 3 chr10 22531232 22531539 -117785226 - AluSc SINE Alu -3 306 1 783 263 75 94 chr10 22531593 22532049 -117784716 - L2 LINE L2 0 3313 2867 212 337 61 10 chr10 22532047 22532145 -117784620 - L3 LINE CR1 -797 780 678 * 2242 250 56 7 chr10 22532240 22533008 -117783757 + L1MD1 LINE L1 3547 4352 -1794 3124 209 44 27 chr10 22533010 22534309 -117782456 + L1MD1 LINE L1 4516 5875 -367 828 217 19 0 chr10 22534309 22534470 -117782295 + FRAM SINE Alu 1 164 -2 3124 209 44 27 chr10 22534470 22534845 -117781920 + L1MD1 LINE L1 5875 6242 0 351 261 78 9 chr10 22535207 22535437 -117781328 - L1M4 LINE L1 -1504 4642 4397 330 292 32 52 chr10 22535834 22535988 -117780777 - L3 LINE CR1 -1083 494 344 550 356 84 25 chr10 22536173 22536566 -117780199 - L3 LINE CR1 -1155 422 7 232 260 40 110 chr10 22538673 22538773 -117777992 - L2 LINE L2 -19 3294 3202 334 264 45 55 chr10 22539734 22539844 -117776921 + MIR3 SINE MIR 3 111 -97 782 188 0 20 chr10 22539956 22540105 -117776660 - AluJo SINE Alu -166 146 1 196 313 0 16 chr10 22540632 22540696 -117776069 - L2 LINE L2 0 3272 3210 1926 151 3 16 chr10 22543604 22543915 -117772850 - AluJo SINE Alu -5 307 1 1971 94 28 0 chr10 22544225 22544511 -117772254 + L1PB1 LINE L1 5856 6149 -2 331 265 102 20 chr10 22544538 22544734 -117772031 - L1ME LINE L1 -410 5711 5500 526 264 0 0 chr10 22544833 22544962 -117771803 - L1ME LINE L1 -505 5616 5488 2150 194 14 14 chr10 22545094 22545516 -117771249 - MSTB LTR MaLR -4 422 1 1663 155 47 6 chr10 22545655 22545972 -117770793 - MLT1B LTR MaLR -60 330 1 2378 154 32 11 chr10 22545973 22546409 -117770356 - MER65A LTR ERV1 0 445 1 977 149 6 23 chr10 22546443 22546618 -117770147 + AluSx SINE Alu 29 200 -112 997 159 18 36 chr10 22546739 22546959 -117769806 - MER4B LTR ERV1 -394 216 1 1402 206 0 65 chr10 22547596 22547729 -117769036 + AluJo SINE Alu 1 141 -171 239 0 32 0 chr10 22547729 22547760 -117769005 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1983 138 3 3 chr10 22547762 22548044 -117768721 - AluSx SINE Alu -30 282 1 1402 206 0 65 chr10 22548044 22548228 -117768537 + AluJo SINE Alu 142 300 -12 1082 252 128 9 chr10 22548649 22548994 -117767771 - MLT1E LTR MaLR -2 591 206 360 0 0 0 chr10 22549436 22549476 -117767289 + (TAA)n Simple_repeat Simple_repeat 2 41 0 341 179 45 8 chr10 22549676 22549810 -117766955 + GA-rich Low_complexity Low_complexity 3 141 0 592 259 142 49 chr10 22550287 22550923 -117765842 - HAL1 LINE L1 -141 2366 1672 360 216 38 92 chr10 22551598 22551639 -117765126 + L1ME LINE L1 2214 2256 -3890 2056 138 13 10 chr10 22551639 22551944 -117764821 + AluSx SINE Alu 1 306 -6 360 216 38 92 chr10 22551944 22552087 -117764678 + L1ME LINE L1 2256 2388 -3758 6584 54 13 1 chr10 22552199 22553442 -117763323 - L1P2 LINE L1 -410 5744 4492 201 39 0 0 chr10 22553702 22553728 -117763037 + (TTG)n Simple_repeat Simple_repeat 2 27 0 796 168 0 0 chr10 22553742 22553873 -117762892 - FLAM_C SINE Alu 0 133 3 230 273 56 25 chr10 22554416 22554577 -117762188 + L1ME LINE L1 3681 3846 -2300 22 0 0 0 chr10 22554751 22554773 -117761992 + AT_rich Low_complexity Low_complexity 1 22 0 237 261 11 0 chr10 22554787 22554879 -117761886 + L1ME LINE L1 5337 5429 -2379 366 342 12 0 chr10 22554897 22555058 -117761707 + L1ME LINE L1 5582 5744 -426 1372 209 27 48 chr10 22555069 22555378 -117761387 + MLT1A1 LTR MaLR 1 302 -63 2121 148 0 3 chr10 22555378 22555688 -117761077 + AluJo SINE Alu 1 309 -3 1372 209 27 48 chr10 22555688 22555751 -117761014 + MLT1A1 LTR MaLR 302 365 0 1994 136 0 7 chr10 22556439 22556725 -117760040 + AluSx SINE Alu 1 284 -28 213 39 0 0 chr10 22556725 22556751 -117760014 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 348 227 0 0 chr10 22557013 22557101 -117759664 + (TG)n Simple_repeat Simple_repeat 1 88 0 339 25 0 0 chr10 22558048 22558088 -117758677 + (TG)n Simple_repeat Simple_repeat 2 41 0 1280 231 105 43 chr10 22558090 22558510 -117758255 - MLT2B1 LTR ERVL -74 446 1 613 271 29 0 chr10 22558513 22558683 -117758082 + MER5B DNA MER1_type 4 178 0 350 360 29 29 chr10 22559155 22559294 -117757471 + L2 LINE L2 3134 3272 0 338 297 74 48 chr10 22559809 22560038 -117756727 + L2 LINE L2 3079 3313 0 4701 267 79 17 chr10 22560264 22562365 -117754400 + L1MEc LINE L1 175 2405 -3991 3426 222 44 38 chr10 22562358 22563349 -117753416 + L1M4 LINE L1 2 998 -5544 * 1024 203 0 16 chr10 22563361 22563548 -117753217 - AluJb SINE Alu -7 305 122 943 201 58 64 chr10 22563548 22563876 -117752889 + L1M4 LINE L1 1041 1366 -5176 721 271 165 20 chr10 22563893 22564244 -117752521 + MLT1G3 LTR MaLR 93 494 -36 1803 157 44 73 chr10 22564453 22564633 -117752132 + MER57A LTR ERV1 8 192 -211 2136 121 0 25 chr10 22564633 22564948 -117751817 - AluSx SINE Alu -3 309 3 1803 157 44 73 chr10 22564948 22565175 -117751590 + MER57A LTR ERV1 192 403 0 28 0 0 0 chr10 22566263 22566291 -117750474 + AT_rich Low_complexity Low_complexity 1 28 0 2101 128 3 0 chr10 22566296 22566593 -117750172 - AluSx SINE Alu -14 298 1 323 256 15 12 chr10 22567346 22567428 -117749337 - MIR SINE MIR -85 123 40 1980 133 41 49 chr10 22568890 22569257 -117747508 - THE1B LTR MaLR 0 364 1 2393 88 0 0 chr10 22569652 22569949 -117746816 - AluSg SINE Alu -11 299 3 234 314 178 35 chr10 22570622 22570880 -117745885 - L3 LINE CR1 -26 1551 1257 3843 94 24 0 chr10 22570961 22571502 -117745263 + MER41A LTR ERV1 1 554 0 2185 137 0 0 chr10 22573427 22573734 -117743031 - AluSq SINE Alu -6 307 1 22 35 0 0 chr10 22573761 22573790 -117742975 + AT_rich Low_complexity Low_complexity 1 29 0 470 302 68 0 chr10 22574670 22574935 -117741830 + L1MEc LINE L1 707 989 -5407 426 193 167 0 chr10 22575031 22575145 -117741620 + MER63 DNA MER1_type 2 760 -76 1135 234 56 36 chr10 22575209 22575842 -117740923 + L1MEc LINE L1 1918 2534 -3681 1832 211 67 4 chr10 22575847 22576387 -117740378 - MER114 LTR ERV 0 648 75 26 30 0 0 chr10 22577372 22577405 -117739360 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 22577433 22577454 -117739311 + AT_rich Low_complexity Low_complexity 1 21 0 359 331 78 13 chr10 22577863 22578017 -117738748 - MIR SINE MIR -86 176 13 1611 190 63 14 chr10 22578672 22579020 -117737745 + MLT1A1 LTR MaLR 1 365 0 410 229 16 49 chr10 22579671 22579793 -117736972 + MIR SINE MIR 115 232 -30 253 322 122 0 chr10 22579836 22579951 -117736814 - L2 LINE L2 -8 3264 3136 953 244 137 14 chr10 22580021 22580445 -117736320 - L1MB7 LINE L1 0 6184 5694 1309 237 45 28 chr10 22580462 22580720 -117736045 - L1ME1 LINE L1 -45 6121 5852 1718 123 0 0 chr10 22580720 22580956 -117735809 - AluSq SINE Alu -13 300 65 1309 237 45 28 chr10 22580956 22581119 -117735646 - L1ME1 LINE L1 -314 5852 5693 2166 121 0 3 chr10 22583700 22583997 -117732768 - AluSc SINE Alu -13 296 1 551 180 69 85 chr10 22585782 22585971 -117730794 + MER53 DNA DNA 2 187 -2 1672 172 7 21 chr10 22588306 22588591 -117728174 + AluJo SINE Alu 1 281 -31 2183 99 0 0 chr10 22588616 22588899 -117727866 - AluSx SINE Alu -16 296 14 287 389 25 13 chr10 22588976 22589133 -117727632 - L2 LINE L2 -421 2893 2735 24 32 0 0 chr10 22589570 22589601 -117727164 + AT_rich Low_complexity Low_complexity 1 31 0 650 212 97 0 chr10 22590690 22590855 -117725910 - MER20 DNA MER1_type 0 219 39 1332 182 13 33 chr10 22591627 22591929 -117724836 - L1MB7 LINE L1 -40 6144 5849 185 359 97 10 chr10 22592013 22592116 -117724649 + L2 LINE L2 2398 2509 -805 2557 105 8 3 chr10 22592184 22592546 -117724219 - THE1B LTR MaLR 0 364 1 1741 176 80 8 chr10 22593068 22593432 -117723333 - MLT1B LTR MaLR 0 390 1 1932 123 6 63 chr10 22593762 22594080 -117722685 - AluSx SINE Alu -12 300 1 275 317 24 16 chr10 22594557 22594680 -117722085 + MIR3 SINE MIR 85 208 0 376 254 78 56 chr10 22594766 22594908 -117721857 - MIR SINE MIR -8 254 110 1941 157 0 13 chr10 22594941 22595246 -117721519 + AluSx SINE Alu 1 301 -11 1005 219 38 86 chr10 22595682 22596079 -117720686 + MLT1C LTR MaLR 34 411 -56 252 0 0 0 chr10 22596079 22596107 -117720658 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5942 53 1 0 chr10 22596111 22596880 -117719885 - L1PA5 LINE L1 -13 6141 5372 988 47 0 0 chr10 22596879 22597008 -117719757 + L1P LINE L1 4327 4455 -1691 * 267 153 34 0 chr10 22597008 22597067 -117719698 + MLT1A1 LTR MaLR 290 350 -15 1797 193 0 0 chr10 22597476 22597771 -117718994 - AluJb SINE Alu -14 298 4 29 28 0 0 chr10 22597773 22597809 -117718956 + AT_rich Low_complexity Low_complexity 1 36 0 1185 230 115 15 chr10 22598404 22598735 -117718030 + MLT1A1 LTR MaLR 2 365 0 2160 171 5 7 chr10 22598934 22599338 -117717427 + MER57A LTR ERV1 1 403 0 1200 249 83 8 chr10 22599618 22600004 -117716761 - L1ME1 LINE L1 -98 6068 5654 1803 24 0 0 chr10 22602207 22602419 -117714346 - L1PA4 LINE L1 -3 6152 5941 22 0 0 0 chr10 22603100 22603122 -117713643 + AT_rich Low_complexity Low_complexity 1 22 0 193 346 122 9 chr10 22603744 22603851 -117712914 + MIR3 SINE MIR 14 132 -76 975 179 19 24 chr10 22605498 22605705 -117711060 - MLT1C LTR MaLR -260 207 2 2372 104 0 3 chr10 22606402 22606711 -117710054 - AluSq SINE Alu -5 308 1 2022 128 122 31 chr10 22607148 22607540 -117709225 - MSTA LTR MaLR 0 428 1 551 333 127 26 chr10 22607777 22608243 -117708522 + L2 LINE L2 2456 2968 -346 455 208 8 0 chr10 22608273 22608398 -117708367 + (CA)n Simple_repeat Simple_repeat 1 126 0 200 175 25 0 chr10 22609115 22609155 -117707610 - L2 LINE L2 0 3313 3273 2140 98 14 11 chr10 22609583 22609870 -117706895 - AluSq SINE Alu -25 288 1 1336 194 22 80 chr10 22611208 22611522 -117705243 - AluJb SINE Alu -16 296 1 2315 167 17 14 chr10 22611674 22612094 -117704671 - MSTB LTR MaLR -5 421 1 2256 111 0 16 chr10 22612444 22612759 -117704006 + AluSx SINE Alu 1 310 -2 1901 130 31 14 chr10 22612982 22613274 -117703491 + AluSq SINE Alu 14 310 -3 227 175 18 0 chr10 22614765 22614822 -117701943 + CT-rich Low_complexity Low_complexity 2 59 0 245 231 0 0 chr10 22615290 22615342 -117701423 - MER112 DNA MER1_type 0 260 209 907 188 29 14 chr10 22615355 22615562 -117701203 - MLT1A1 LTR MaLR 0 365 156 670 224 7 7 chr10 22615601 22615753 -117701012 - MLT1A1 LTR MaLR -204 161 10 264 291 11 40 chr10 22617876 22618051 -117698714 + MER41B LTR ERV1 258 427 -208 2048 148 5 44 chr10 22618486 22618871 -117697894 + L1MC1 LINE L1 5964 6333 0 412 275 99 33 chr10 22619304 22619972 -117696793 + L1MCc LINE L1 1228 2088 -4853 561 207 136 20 chr10 22620020 22620218 -117696547 + L1ME2 LINE L1 5928 6148 -16 1758 68 4 0 chr10 22620308 22620556 -117696209 + L1PA7 LINE L1 1852 2100 -4046 16014 96 14 1 chr10 22620856 22623956 -117692809 + L1PA7 LINE L1 3037 6153 -1 281 294 18 0 chr10 22624132 22624241 -117692524 + L1ME LINE L1 5649 5759 -362 533 304 144 19 chr10 22624348 22624611 -117692154 - L2 LINE L2 -2797 517 222 383 277 62 15 chr10 22625929 22626059 -117690706 + Charlie1 DNA MER1_type 1 136 -2625 28 29 0 0 chr10 22626087 22626122 -117690643 + AT_rich Low_complexity Low_complexity 1 35 0 489 251 68 11 chr10 22626122 22626184 -117690581 + Charlie1 DNA MER1_type 2560 2617 -144 2348 96 0 0 chr10 22626184 22626477 -117690288 + AluSq SINE Alu 1 293 -20 489 251 68 11 chr10 22626477 22626605 -117690160 + Charlie1 DNA MER1_type 2617 2761 0 714 211 0 96 chr10 22627585 22627803 -117688962 + MER51C LTR ERV1 444 640 0 190 296 111 25 chr10 22630142 22630223 -117686542 + MIR3 SINE MIR 106 193 -15 2326 90 76 17 chr10 22632548 22632892 -117683873 + THE1B LTR MaLR 1 364 0 228 247 21 62 chr10 22633134 22633231 -117683534 + LTR16A1 LTR ERVL 1 93 -364 702 251 35 0 chr10 22633284 22633487 -117683278 + LTR16A LTR ERVL 224 433 -17 301 266 79 95 chr10 22633783 22634088 -117682677 + MER102b DNA MER1_type 38 337 -4 680 280 47 4 chr10 22634685 22634921 -117681844 + L2 LINE L2 872 1117 -2197 977 255 132 78 chr10 22635431 22635820 -117680945 + L2 LINE L2 75 508 -2806 3595 162 82 1 chr10 22635820 22636488 -117680277 - MER72 LTR ERV1 0 722 1 977 255 132 78 chr10 22636488 22636690 -117680075 + L2 LINE L2 508 698 -2616 740 313 30 13 chr10 22636691 22636921 -117679844 + L2 LINE L2 2542 2775 -539 4823 286 119 19 chr10 22636921 22637876 -117678889 + L2 LINE L2 634 1492 -1821 2169 115 20 0 chr10 22637876 22638180 -117678585 - AluSx SINE Alu -1 311 2 4823 286 119 19 chr10 22638180 22638282 -117678483 + L2 LINE L2 1492 1582 -1731 1779 156 111 26 chr10 22638282 22638661 -117678104 + MLT2D LTR ERVL 4 414 0 4823 286 119 19 chr10 22638661 22640029 -117676736 + L2 LINE L2 1582 3307 -6 351 312 15 50 chr10 22641365 22641567 -117675198 + L2 LINE L2 3119 3313 0 565 270 74 38 chr10 22642030 22642256 -117674509 - MIR SINE MIR -6 256 26 201 147 0 0 chr10 22643932 22643966 -117672799 + (TATG)n Simple_repeat Simple_repeat 2 35 0 208 208 62 0 chr10 22644088 22644136 -117672629 + L2 LINE L2 3222 3272 0 1799 183 10 3 chr10 22645969 22646269 -117670496 + AluJo SINE Alu 5 306 -6 27 49 0 0 chr10 22646666 22646707 -117670058 + AT_rich Low_complexity Low_complexity 1 41 0 199 347 0 13 chr10 22648095 22648170 -117668595 + MIR3 SINE MIR 89 162 -46 246 269 64 57 chr10 22648674 22648815 -117667950 + MIR SINE MIR 111 252 -10 338 304 67 42 chr10 22648907 22649220 -117667545 + HAL1b LINE L1 221 541 -807 325 320 82 70 chr10 22649356 22649928 -117666837 + L1MC4a LINE L1 4410 4988 -1158 1502 259 156 18 chr10 22650180 22650814 -117665951 + L1MC4a LINE L1 5254 6002 -1806 1798 165 14 22 chr10 22650814 22651172 -117665593 + THE1A LTR MaLR 1 355 0 1502 259 156 18 chr10 22651172 22651260 -117665505 + L1MC4a LINE L1 6002 6076 -1732 22 35 0 0 chr10 22651319 22651348 -117665417 + AT_rich Low_complexity Low_complexity 1 29 0 210 208 0 0 chr10 22651393 22651446 -117665319 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 57 0 0 chr10 22651986 22652021 -117664744 + AT_rich Low_complexity Low_complexity 1 35 0 27 62 0 0 chr10 22652163 22652211 -117664554 + AT_rich Low_complexity Low_complexity 1 48 0 219 69 0 0 chr10 22653051 22653080 -117663685 + (A)n Simple_repeat Simple_repeat 1 29 0 1053 279 97 66 chr10 22654293 22654742 -117662023 - L2 LINE L2 -1 3312 2878 796 197 0 0 chr10 22654742 22654874 -117661891 + FLAM_C SINE Alu 1 132 -1 1053 279 97 66 chr10 22654874 22655309 -117661456 - L2 LINE L2 -435 2878 2422 260 304 140 49 chr10 22655320 22655563 -117661202 - L2 LINE L2 0 3313 3049 2667 259 126 13 chr10 22655587 22656562 -117660203 - L2 LINE L2 -418 2896 1812 2169 90 3 7 chr10 22657278 22657593 -117659172 + AluSc SINE Alu 1 309 0 263 360 72 0 chr10 22658820 22658931 -117657834 - L2 LINE L2 -7 3265 3147 2179 204 36 71 chr10 22661041 22661674 -117655091 - LTR9 LTR ERV1 0 612 2 249 240 62 129 chr10 22661675 22661900 -117654865 + HAL1 LINE L1 23 232 -2275 363 221 11 42 chr10 22662007 22662102 -117654663 + HAL1 LINE L1 1253 1344 -1163 990 243 13 59 chr10 22662110 22662143 -117654622 + MER21B LTR ERV1 1 34 -829 2695 108 6 0 chr10 22662143 22662505 -117654260 - THE1B LTR MaLR 0 364 1 990 243 13 59 chr10 22662505 22662775 -117653990 + MER21B LTR ERV1 34 290 -573 1008 216 37 54 chr10 22662888 22663184 -117653581 + MER21B LTR ERV1 466 756 -107 580 216 42 85 chr10 22663296 22663555 -117653210 + HAL1 LINE L1 1339 1586 -921 558 269 201 23 chr10 22663612 22664210 -117652555 + HAL1 LINE L1 1697 2400 -107 21 0 0 0 chr10 22665145 22665166 -117651599 + AT_rich Low_complexity Low_complexity 1 21 0 2156 157 0 0 chr10 22665344 22665656 -117651109 - AluSx SINE Alu 0 312 1 410 293 61 57 chr10 22665782 22665994 -117650771 + MIR SINE MIR 36 248 -14 219 170 0 0 chr10 22666413 22666460 -117650305 + (CAGTT)n Simple_repeat Simple_repeat 4 50 0 351 0 0 0 chr10 22667030 22667069 -117649696 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 125 100 0 chr10 22667083 22667123 -117649642 - LTR65 LTR ERV1 -21 648 605 339 298 38 0 chr10 22667661 22667819 -117648946 - LTR65 LTR ERV1 -505 164 1 201 245 38 9 chr10 22667885 22667991 -117648774 + (TA)n Simple_repeat Simple_repeat 2 110 0 23 0 0 0 chr10 22668637 22668660 -117648105 + AT_rich Low_complexity Low_complexity 1 23 0 2024 146 7 0 chr10 22668671 22668980 -117647785 + AluSx SINE Alu 2 312 0 264 100 0 0 chr10 22669182 22669222 -117647543 + (CAT)n Simple_repeat Simple_repeat 3 42 0 23 33 0 0 chr10 22670263 22670293 -117646472 + AT_rich Low_complexity Low_complexity 1 30 0 381 260 102 0 chr10 22670352 22670529 -117646236 - L1ME4a LINE L1 -177 5944 5750 1941 25 0 0 chr10 22673470 22673706 -117643059 + L1HS LINE L1 5907 6142 -13 249 109 0 0 chr10 22673707 22673753 -117643012 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 6274 162 42 13 chr10 22673782 22674080 -117642685 - L1 LINE L1 -1518 4628 4340 1806 169 3 7 chr10 22674080 22674381 -117642384 - AluJb SINE Alu -12 300 1 6274 162 42 13 chr10 22674381 22675416 -117641349 - L1 LINE L1 -1806 4340 3256 359 247 54 32 chr10 22675659 22675752 -117641013 + MIR SINE MIR 34 128 -134 443 334 13 5 chr10 22676402 22676587 -117640178 + MIR3 SINE MIR 15 200 -8 368 278 35 77 chr10 22676787 22676956 -117639809 + MLT1J LTR MaLR 258 419 -92 574 319 47 14 chr10 22677641 22677854 -117638911 + MIR SINE MIR 5 224 -38 2014 157 0 23 chr10 22678543 22678888 -117637877 - MER1B DNA MER1_type 0 337 1 211 237 105 26 chr10 22679026 22679102 -117637663 + MIR SINE MIR 181 262 0 231 339 150 0 chr10 22679103 22679230 -117637535 + L3b LINE CR1 1168 1313 -270 502 152 50 0 chr10 22679938 22680037 -117636728 - MER5A DNA MER1_type -77 112 9 2223 142 19 39 chr10 22682476 22682867 -117633898 + MER57A LTR ERV1 1 385 -18 2022 141 3 3 chr10 22682867 22683172 -117633593 - AluSx SINE Alu -7 305 1 2223 142 19 39 chr10 22683172 22683190 -117633575 + MER57A LTR ERV1 385 402 -1 195 381 39 35 chr10 22683219 22683450 -117633315 + L2 LINE L2 2828 3059 -213 2294 114 22 13 chr10 22683765 22684136 -117632629 - THE1B LTR MaLR 0 364 1 229 345 23 11 chr10 22684504 22684591 -117632174 - MIR SINE MIR -80 128 41 204 365 32 32 chr10 22685526 22685652 -117631113 - L2 LINE L2 -20 3293 3168 3194 143 55 74 chr10 22685830 22686534 -117630231 + LTR8 LTR ERV1 1 691 0 1154 225 171 7 chr10 22686603 22687043 -117629722 + L1M4 LINE L1 4382 4893 -1253 255 220 0 0 chr10 22687096 22687146 -117629619 - MIR SINE MIR -134 128 79 1926 162 42 0 chr10 22688002 22688335 -117628430 - MER7A DNA MER2_type -1 345 1 315 317 50 31 chr10 22688359 22688520 -117628245 - MIR3 SINE MIR -3 205 42 771 321 116 11 chr10 22689707 22690155 -117626610 + LTR33 LTR ERVL 5 499 -22 1694 144 3 75 chr10 22690274 22690593 -117626172 - AluSq SINE Alu -17 296 1 755 191 8 0 chr10 22690700 22690831 -117625934 - FLAM_A SINE Alu -1 132 1 2289 108 0 0 chr10 22691741 22692038 -117624727 + AluSc SINE Alu 1 297 -12 1296 199 10 37 chr10 22693677 22693974 -117622791 - AluJo SINE Alu -18 294 6 2191 102 16 16 chr10 22695402 22695715 -117621050 - AluSq SINE Alu 0 313 1 182 114 0 29 chr10 22696215 22696250 -117620515 + (CA)n Simple_repeat Simple_repeat 2 35 0 299 338 90 8 chr10 22696746 22696879 -117619886 + MIR SINE MIR 4 147 -115 367 167 78 0 chr10 22697204 22697294 -117619471 + L1MB3 LINE L1 6079 6175 -8 1981 159 0 6 chr10 22697941 22698255 -117618510 + AluJb SINE Alu 1 312 0 181 122 122 102 chr10 22698288 22698337 -117618428 - MER5B DNA MER1_type -70 108 59 2163 119 7 10 chr10 22698973 22699276 -117617489 - AluSq SINE Alu -11 302 1 273 119 0 0 chr10 22699630 22699672 -117617093 + (T)n Simple_repeat Simple_repeat 1 42 0 223 294 98 29 chr10 22699809 22699911 -117616854 + MIR SINE MIR 110 218 -44 1597 199 34 0 chr10 22700107 22700403 -117616362 + AluJo SINE Alu 6 311 -1 2197 103 10 3 chr10 22701165 22701465 -117615300 - AluSx SINE Alu 0 312 11 229 169 0 130 chr10 22701776 22701853 -117614912 + L1MC4 LINE L1 6637 6703 -1339 * 303 191 0 43 chr10 22701839 22701933 -117614832 - L1MC4 LINE L1 -1339 6703 6614 * 308 202 0 22 chr10 22701853 22701942 -117614823 + L1MC4 LINE L1 6614 6700 -1342 1540 187 21 21 chr10 22701945 22702229 -117614536 - AluJo SINE Alu -27 285 2 21 0 0 0 chr10 22702491 22702512 -117614253 + AT_rich Low_complexity Low_complexity 1 21 0 234 242 16 0 chr10 22702799 22702861 -117613904 - MIR SINE MIR -12 250 188 207 406 28 0 chr10 22705039 22705145 -117611620 - L3 LINE CR1 -19 1558 1450 1916 128 34 52 chr10 22712240 22712622 -117604143 + THE1C LTR MaLR 1 375 0 2556 169 37 27 chr10 22713735 22714249 -117602516 - L1MA9 LINE L1 -280 6032 5514 1908 146 54 0 chr10 22714839 22715133 -117601632 - AluSx SINE Alu -2 310 1 243 368 140 0 chr10 22715204 22715318 -117601447 + L2 LINE L2 3178 3307 -6 192 343 48 19 chr10 22716574 22716679 -117600086 - MIR SINE MIR -71 137 30 1522 129 12 0 chr10 22716788 22717036 -117599729 + L1MA5A LINE L1 6041 6291 -6 234 0 0 0 chr10 22717448 22717474 -117599291 + (TA)n Simple_repeat Simple_repeat 2 27 0 34 24 0 0 chr10 22717593 22717634 -117599131 + AT_rich Low_complexity Low_complexity 1 41 0 569 290 159 12 chr10 22717672 22717924 -117598841 - L2 LINE L2 -1 3312 3024 1489 289 51 46 chr10 22718239 22718943 -117597822 - L2 LINE L2 -321 2992 2287 2164 128 0 0 chr10 22719206 22719502 -117597263 + AluSx SINE Alu 1 296 -16 2092 132 3 0 chr10 22820229 22820532 -117496233 + AluY SINE Alu 1 304 -7 535 284 51 33 chr10 22820601 22820881 -117495884 - LTR16A LTR ERVL -1 490 164 441 253 108 6 chr10 22820889 22821047 -117495718 - MER63A DNA MER1_type -36 174 1 22 0 0 0 chr10 22821483 22821505 -117495260 + AT_rich Low_complexity Low_complexity 1 22 0 1618 159 11 39 chr10 22821512 22821795 -117494970 + AluJo SINE Alu 5 279 -33 190 115 39 19 chr10 22821832 22821884 -117494881 + A-rich Low_complexity Low_complexity 3 55 0 3396 168 32 19 chr10 22822740 22823334 -117493431 - LTR26 LTR ERV1 -1 602 1 502 273 99 12 chr10 22823509 22823670 -117493095 + MER5B DNA MER1_type 1 175 -3 2193 113 0 0 chr10 22824198 22824535 -117492230 + AluSq SINE Alu 3 313 0 2178 108 0 0 chr10 22824539 22824827 -117491938 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22825539 22825627 -117491138 + (CA)n Simple_repeat Simple_repeat 2 89 0 1193 223 34 30 chr10 22826208 22826504 -117490261 + AluJo SINE Alu 2 298 -4 1682 128 4 55 chr10 22826962 22827088 -117489677 - AluSq SINE Alu -54 259 153 2590 52 7 0 chr10 22827088 22827395 -117489370 - AluY SINE Alu -2 309 1 1682 128 4 55 chr10 22827395 22827541 -117489224 - AluSq SINE Alu -160 153 1 409 271 187 23 chr10 22827897 22828111 -117488654 - MIR SINE MIR -1 261 13 888 209 0 0 chr10 22828698 22828861 -117487904 + FRAM SINE Alu 1 163 -13 228 395 32 22 chr10 22828872 22829057 -117487708 - MER5A DNA MER1_type -1 188 2 933 223 58 27 chr10 22829290 22829325 -117487440 - MIR SINE MIR -6 256 224 3753 92 4 6 chr10 22829325 22829812 -117486953 + LTR19A LTR ERV1 1 486 0 933 223 58 27 chr10 22829812 22830000 -117486765 - MIR SINE MIR -38 224 26 598 88 0 0 chr10 22830373 22830453 -117486312 - LTR26B LTR ERV1 -451 80 1 1415 160 57 32 chr10 22830626 22830907 -117485858 + L1MB7 LINE L1 5897 6184 0 1499 173 73 30 chr10 22830907 22831371 -117485394 + LTR54 LTR ERV1 1 496 -2 823 194 6 12 chr10 22831530 22831700 -117485065 - L1P2 LINE L1 -530 5624 5456 2284 161 22 160 chr10 22831707 22831919 -117484846 + L1MCa LINE L1 1769 2008 -4418 610 198 0 20 chr10 22831919 22832020 -117484745 - FLAM_A SINE Alu -43 99 1 2284 161 22 160 chr10 22832020 22832908 -117483857 + L1MCa LINE L1 2008 2804 -3622 592 195 58 32 chr10 22833153 22833307 -117483458 + L1MA10 LINE L1 6177 6334 0 276 232 18 0 chr10 22833309 22833365 -117483400 + L2 LINE L2 2737 2793 -521 322 236 14 0 chr10 22833398 22833470 -117483295 + L2 LINE L2 3238 3310 -3 21 36 0 0 chr10 22833573 22833601 -117483164 + AT_rich Low_complexity Low_complexity 1 28 0 2474 172 79 16 chr10 22833615 22834121 -117482644 + L1MB8 LINE L1 5588 6125 -53 722 203 7 27 chr10 22834141 22834289 -117482476 - AluSq SINE Alu -20 293 149 1537 157 57 0 chr10 22834450 22834712 -117482053 + AluSg SINE Alu 8 284 -26 27 29 0 0 chr10 22834719 22834753 -117482012 + AT_rich Low_complexity Low_complexity 1 34 0 1104 117 6 53 chr10 22834753 22834924 -117481841 + AluSg/x SINE Alu 129 291 -21 449 213 16 63 chr10 22835014 22835141 -117481624 + MIR SINE MIR 92 212 -50 5373 90 18 42 chr10 22836018 22836895 -117479870 - L1P LINE L1 -2039 4107 3252 838 274 39 8 chr10 22837374 22837633 -117479132 - MER69 DNA AcHobo -2128 398 132 848 113 0 0 chr10 22837634 22837749 -117479016 + AluSg SINE Alu 1 115 -195 1979 144 0 0 chr10 22837751 22838036 -117478729 + AluSg SINE Alu 1 285 -25 880 142 0 68 chr10 22838074 22838279 -117478486 + AluSg SINE Alu 107 297 -13 291 281 76 76 chr10 22838484 22838747 -117478018 + LTR67 LTR ERVL 277 539 -18 2534 57 0 19 chr10 22838754 22839070 -117477695 - AluY SINE Alu -1 310 1 303 243 8 68 chr10 22839401 22839545 -117477220 - MLT1G1 LTR MaLR -2 579 460 2985 118 11 29 chr10 22840533 22840975 -117475790 - Tigger2a DNA MER2_type 0 434 1 481 274 108 32 chr10 22842415 22842647 -117474118 - MIR SINE MIR -13 249 1 189 0 0 0 chr10 22843168 22843189 -117473576 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 387 0 0 0 chr10 22843459 22843502 -117473263 + (A)n Simple_repeat Simple_repeat 1 43 0 629 312 27 14 chr10 22844156 22844414 -117472351 + MIR SINE MIR 4 262 0 1967 154 0 19 chr10 22845302 22845614 -117471151 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22846145 22846234 -117470531 + G-rich Low_complexity Low_complexity 1 89 0 1056 47 78 0 chr10 22847640 22847768 -117468997 - MER85 DNA T2_type 0 139 2 2329 133 128 8 chr10 22848491 22848873 -117467892 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr10 22850260 22850281 -117466484 + AT_rich Low_complexity Low_complexity 1 21 0 375 219 96 102 chr10 22850381 22850421 -117466344 - MER5A DNA MER1_type -3 186 147 2350 68 3 7 chr10 22850421 22850717 -117466048 + AluY SINE Alu 1 295 -16 375 219 96 102 chr10 22850717 22850863 -117465902 - MER5A DNA MER1_type -42 147 1 1709 160 25 7 chr10 22851437 22851718 -117465047 + AluJo SINE Alu 1 286 -26 32 43 0 0 chr10 22851719 22851765 -117465000 + AT_rich Low_complexity Low_complexity 1 46 0 537 325 30 22 chr10 22852019 22852362 -117464403 - L1MC4a LINE L1 -303 5818 5561 352 264 31 8 chr10 22854099 22854228 -117462537 + (TA)n Simple_repeat Simple_repeat 1 132 0 1017 131 95 12 chr10 22854228 22854396 -117462369 + MER44D DNA MER2_type 1 452 -157 324 151 0 0 chr10 22854413 22854466 -117462299 - L1PB1 LINE L1 -4 6147 6095 1619 56 65 0 chr10 22854466 22854681 -117462084 + L1P5 LINE L1 5324 5552 -599 1086 146 12 6 chr10 22854681 22854852 -117461913 + MER44D DNA MER2_type 434 605 0 227 145 58 0 chr10 22854869 22854938 -117461827 + (TA)n Simple_repeat Simple_repeat 2 74 0 1890 156 3 31 chr10 22856218 22856539 -117460226 - AluJo SINE Alu 0 312 1 272 286 247 19 chr10 22857092 22857246 -117459519 - MIR3 SINE MIR -6 202 14 1650 164 3 50 chr10 22858340 22858658 -117458107 - AluJo SINE Alu -9 303 1 2287 99 3 0 chr10 22859581 22859874 -117456891 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr10 22860098 22860127 -117456638 + AT_rich Low_complexity Low_complexity 1 29 0 885 196 7 0 chr10 22860132 22860285 -117456480 - AluJo SINE Alu -35 277 124 243 310 0 14 chr10 22860300 22860371 -117456394 + L2 LINE L2 3182 3251 -62 1551 157 25 47 chr10 22861481 22861799 -117454966 - AluJo SINE Alu -1 311 1 355 321 42 31 chr10 22863038 22863231 -117453534 + MIR SINE MIR 12 206 -56 1984 130 20 3 chr10 22863800 22864101 -117452664 - AluSx SINE Alu -6 306 1 2074 98 4 0 chr10 22864728 22865003 -117451762 + AluSg1 SINE Alu 1 276 -33 439 293 32 104 chr10 22867484 22867859 -117448906 + L2 LINE L2 2915 3262 -10 2159 95 0 3 chr10 22869391 22869703 -117447062 + AluSx SINE Alu 1 311 0 631 287 105 5 chr10 22871661 22871870 -117444895 + MIR SINE MIR 19 248 -14 209 222 0 0 chr10 22871875 22871920 -117444845 + (TTA)n Simple_repeat Simple_repeat 3 47 0 226 299 27 61 chr10 22871929 22872076 -117444689 + MIR SINE MIR 67 208 -54 752 186 20 93 chr10 22872170 22872374 -117444391 + MER20 DNA MER1_type 31 219 0 2105 201 106 27 chr10 22872689 22873210 -117443555 + MER68 LTR ERV1 1 562 0 1938 154 0 13 chr10 22873298 22873609 -117443156 - AluJb SINE Alu -5 307 1 2237 115 0 28 chr10 22873919 22874240 -117442525 + AluSx SINE Alu 1 312 0 234 242 16 0 chr10 22874255 22874317 -117442448 + L1P LINE L1 1900 1962 -4184 212 167 0 0 chr10 22874431 22874467 -117442298 + (CA)n Simple_repeat Simple_repeat 1 36 0 332 275 98 79 chr10 22874475 22874893 -117441872 + L1MEc LINE L1 1877 2302 -4094 21 0 0 0 chr10 22878541 22878562 -117438203 + AT_rich Low_complexity Low_complexity 1 21 0 1461 112 0 15 chr10 22879522 22879728 -117437037 + AluSc SINE Alu 107 309 0 1935 171 0 3 chr10 22879844 22880148 -117436617 + AluJb SINE Alu 3 305 -7 354 243 78 0 chr10 22880341 22880444 -117436321 - MER117 DNA MER1_type -40 157 47 1157 66 0 0 chr10 22880757 22880893 -117435872 - L1PA10 LINE L1 -1 6167 6032 386 0 0 39 chr10 22880893 22880944 -117435821 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 225 156 0 0 chr10 22880944 22880976 -117435789 - AluSx SINE Alu -18 284 253 1913 141 4 0 chr10 22880976 22881252 -117435513 - AluSx SINE Alu -35 277 1 206 143 29 0 chr10 22881762 22881797 -117434968 + (CATA)n Simple_repeat Simple_repeat 3 38 0 1951 151 13 0 chr10 22881835 22882133 -117434632 + AluSx SINE Alu 1 302 -10 1608 179 23 23 chr10 22882133 22882440 -117434325 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 22883429 22883457 -117433308 + AT_rich Low_complexity Low_complexity 1 28 0 648 232 55 48 chr10 22883463 22883663 -117433102 + L1ME1 LINE L1 5962 6162 -20 230 245 255 46 chr10 22883894 22884090 -117432675 + HAL1 LINE L1 1347 1583 -924 7368 69 11 12 chr10 22884161 22885481 -117431284 - L1PA8 LINE L1 -10 6162 4842 610 306 50 12 chr10 22885588 22885830 -117430935 + MER112 DNA MER1_type 8 258 -2 2205 166 23 29 chr10 22885970 22886037 -117430728 - MSTB LTR MaLR -2 424 358 1861 109 101 0 chr10 22886037 22886304 -117430461 + AluSc SINE Alu 3 296 -13 2205 166 23 29 chr10 22886304 22886622 -117430143 - MSTB LTR MaLR -68 358 41 1896 116 14 28 chr10 22886622 22886635 -117430130 - L1PA15 LINE L1 0 6165 6153 2122 141 157 5 chr10 22886635 22887004 -117429761 + MSTA LTR MaLR 4 428 0 1896 116 14 28 chr10 22887004 22887274 -117429491 - L1PA15 LINE L1 -12 6153 5886 3116 112 9 2 chr10 22887606 22888053 -117428712 - MER41B LTR ERV1 -91 544 95 627 264 107 5 chr10 22888075 22888272 -117428493 - MIR SINE MIR 0 262 46 1889 228 28 5 chr10 22888280 22888706 -117428059 - MER63B DNA MER1_type 0 436 1 22 35 0 0 chr10 22889794 22889823 -117426942 + AT_rich Low_complexity Low_complexity 1 29 0 2248 80 22 26 chr10 22890064 22890377 -117426388 + AluSx SINE Alu 1 312 0 5778 143 44 9 chr10 22891462 22891957 -117424808 + L1MA8 LINE L1 5285 5761 -530 180 0 0 0 chr10 22891957 22891977 -117424788 + (CA)n Simple_repeat Simple_repeat 2 21 0 5778 143 44 9 chr10 22891977 22892452 -117424313 + L1MA8 LINE L1 5761 6289 -2 2357 76 0 7 chr10 22892550 22892854 -117423911 - AluY SINE Alu -9 302 1 24 32 0 0 chr10 22893483 22893514 -117423251 + AT_rich Low_complexity Low_complexity 1 31 0 384 286 9 9 chr10 22893656 22893761 -117423004 + MIR SINE MIR 37 141 -67 180 0 0 0 chr10 22894403 22894423 -117422342 + (A)n Simple_repeat Simple_repeat 1 20 0 1963 190 45 30 chr10 22894509 22894667 -117422098 - MLT2D LTR ERVL -8 406 252 2026 114 0 44 chr10 22894667 22894984 -117421781 + AluSx SINE Alu 1 303 -9 1963 190 45 30 chr10 22894984 22895225 -117421540 - MLT2D LTR ERVL -162 252 1 248 182 15 76 chr10 22895985 22896051 -117420714 + MIR3 SINE MIR 139 200 -8 189 313 101 0 chr10 22896288 22896387 -117420378 - MIR SINE MIR -53 209 101 2124 218 36 6 chr10 22897191 22897719 -117419046 + L1M4c LINE L1 1935 2478 -3906 328 206 14 0 chr10 22897721 22897794 -117418971 - L1MA10 LINE L1 -1 6333 6260 688 159 0 19 chr10 22897843 22897950 -117418815 + FLAM_A SINE Alu 4 108 -34 204 97 0 0 chr10 22897953 22897984 -117418781 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1419 128 66 4 chr10 22898858 22899100 -117417665 + L1MA4 LINE L1 6042 6298 -2 25 51 0 0 chr10 22899100 22899139 -117417626 + AT_rich Low_complexity Low_complexity 1 39 0 232 266 75 11 chr10 22899372 22899466 -117417299 + HAL1b LINE L1 1232 1331 -17 2184 136 0 0 chr10 22899703 22900013 -117416752 + AluSx SINE Alu 1 310 -2 637 262 120 0 chr10 22901486 22901669 -117415096 + MIR SINE MIR 44 248 -14 286 288 64 36 chr10 22902414 22902585 -117414180 + L1ME1 LINE L1 5505 5677 -493 248 261 72 68 chr10 22902609 22902831 -117413934 + L1ME1 LINE L1 5777 5999 -167 1713 146 57 36 chr10 22903495 22903796 -117412969 - AluJb SINE Alu -5 307 1 378 111 0 0 chr10 22906362 22906416 -117410349 - MER5A DNA MER1_type -2 187 134 1326 271 69 15 chr10 22906434 22906913 -117409852 + L2 LINE L2 1559 2063 -1251 844 221 12 0 chr10 22906913 22907085 -117409680 + MLT1B LTR MaLR 1 174 -216 322 237 34 45 chr10 22907119 22907357 -117409408 + (ATATG)n Simple_repeat Simple_repeat 1 235 0 215 82 52 67 chr10 22907393 22907528 -117409237 + (TA)n Simple_repeat Simple_repeat 1 133 0 1877 135 0 80 chr10 22908339 22908666 -117408099 + AluJb SINE Alu 6 306 -6 1476 153 91 11 chr10 22909567 22909828 -117406937 + AluSx SINE Alu 1 301 -11 214 108 0 0 chr10 22909828 22909865 -117406900 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 1476 153 91 11 chr10 22909865 22909878 -117406887 + AluSx SINE Alu 301 312 0 940 174 0 0 chr10 22909878 22910033 -117406732 + AluJb SINE Alu 134 288 -24 190 172 0 0 chr10 22911614 22911643 -117405122 - L2 LINE L2 -18 3254 3226 2489 57 3 0 chr10 22912927 22913226 -117403539 - AluY SINE Alu -11 300 1 298 376 31 47 chr10 22913526 22913654 -117403111 + L3 LINE CR1 1281 1405 -172 1730 148 31 14 chr10 22913654 22913944 -117402821 + AluJb SINE Alu 1 295 -17 298 376 31 47 chr10 22913944 22914070 -117402695 + L3 LINE CR1 1405 1531 -46 764 240 203 31 chr10 22914368 22914689 -117402076 + MLT1K LTR MaLR 210 585 -3 1784 168 0 11 chr10 22914832 22915144 -117401621 - AluJo SINE Alu 0 309 1 1655 159 29 0 chr10 22916858 22917135 -117399630 + AluJo SINE Alu 9 293 -19 229 161 16 16 chr10 22917135 22917197 -117399568 + (TTA)n Simple_repeat Simple_repeat 1 62 0 459 252 160 0 chr10 22917469 22917600 -117399165 - MER5B DNA MER1_type -2 176 25 1165 233 55 70 chr10 22917632 22917764 -117399001 - MLT1C LTR MaLR -3 464 332 2052 140 13 3 chr10 22917764 22918072 -117398693 - AluSq SINE Alu -2 311 1 1165 233 55 70 chr10 22918072 22918363 -117398402 - MLT1C LTR MaLR -135 332 59 2028 149 0 0 chr10 22918663 22918958 -117397807 + AluSx SINE Alu 1 295 -17 874 166 6 19 chr10 22919133 22919290 -117397475 + FRAM SINE Alu 4 158 -18 2177 125 0 3 chr10 22919290 22919593 -117397172 + AluSx SINE Alu 1 302 -10 2293 79 0 3 chr10 22919748 22920038 -117396727 + AluY SINE Alu 1 289 -22 321 26 0 0 chr10 22920038 22920076 -117396689 + (TA)n Simple_repeat Simple_repeat 2 39 0 218 299 140 19 chr10 22920694 22920801 -117395964 + MIR SINE MIR 108 227 -35 185 260 40 0 chr10 22920771 22920821 -117395944 + L2 LINE L2 3201 3252 -20 * 1413 206 20 13 chr10 22921324 22921725 -117395040 + L1MB8 LINE L1 5512 5948 -230 2223 99 7 3 chr10 22922194 22922496 -117394269 - AluY SINE Alu -8 303 1 571 295 95 17 chr10 22922567 22922808 -117393957 + MIR SINE MIR 3 262 0 2223 99 7 3 chr10 22924099 22924401 -117392364 - AluY SINE Alu -8 303 1 1844 152 0 7 chr10 22924419 22924729 -117392036 - AluJo SINE Alu 0 308 1 3546 176 19 39 chr10 22925385 22925786 -117390979 + L1MB3 LINE L1 5219 5626 -548 2365 106 0 6 chr10 22925786 22926098 -117390667 + AluSx SINE Alu 3 312 0 3546 176 19 39 chr10 22926098 22926707 -117390058 + L1MB3 LINE L1 5626 6173 -1 2283 77 0 11 chr10 22926946 22927271 -117389494 + AluY SINE Alu 1 322 0 315 243 50 60 chr10 22929006 22929139 -117387626 - MIR SINE MIR -62 146 52 841 259 43 21 chr10 22929789 22930071 -117386694 - MARNA DNA Mariner -19 567 280 235 255 69 88 chr10 22930278 22930468 -117386297 - MARNA DNA Mariner -357 229 42 2169 126 7 3 chr10 22930468 22930778 -117385987 - AluSx SINE Alu -1 311 1 235 255 69 88 chr10 22930778 22930803 -117385962 - MARNA DNA Mariner -544 42 18 1954 218 24 27 chr10 22931010 22931569 -117385196 + L1MC4 LINE L1 6441 7089 -797 1693 248 116 8 chr10 22931604 22932104 -117384661 + L1MC4 LINE L1 7352 7905 -137 270 0 0 0 chr10 22932159 22932189 -117384576 + (A)n Simple_repeat Simple_repeat 1 30 0 2181 123 3 0 chr10 22932385 22932685 -117384080 - AluSx SINE Alu -11 301 1 231 159 116 87 chr10 22932692 22932761 -117384004 - MER21A LTR ERV1 -295 636 566 1650 124 0 0 chr10 22933227 22933453 -117383312 + AluJb SINE Alu 42 267 -45 1036 101 0 71 chr10 22934081 22934250 -117382515 + AluSg/x SINE Alu 156 312 0 1662 173 0 43 chr10 22934963 22935264 -117381501 + AluJo SINE Alu 1 288 -24 1994 152 3 0 chr10 22936119 22936421 -117380344 + AluJb SINE Alu 1 303 -9 745 239 146 58 chr10 22937611 22937843 -117378922 - MLT1I LTR MaLR 0 409 130 1447 189 60 7 chr10 22937843 22938124 -117378641 + AluJo SINE Alu 3 298 -14 745 239 146 58 chr10 22938124 22938267 -117378498 - MLT1I LTR MaLR -279 130 1 248 315 11 11 chr10 22938358 22938447 -117378318 - MER117 DNA MER1_type -107 90 2 285 278 26 17 chr10 22939595 22939710 -117377055 + L2 LINE L2 2217 2332 -982 1205 108 165 19 chr10 22939961 22940173 -117376592 - MER2 DNA MER2_type -97 248 6 244 381 127 11 chr10 22940423 22940793 -117375972 + L2 LINE L2 2222 2634 -680 1618 173 7 22 chr10 22941272 22941550 -117375215 - AluJo SINE Alu -34 278 5 216 0 0 0 chr10 22941849 22941873 -117374892 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 387 0 0 0 chr10 22942209 22942252 -117374513 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1650 130 4 65 chr10 22943697 22943843 -117372922 + AluSq SINE Alu 1 124 -189 2596 55 7 0 chr10 22943843 22944152 -117372613 + AluY SINE Alu 1 311 0 1650 130 4 65 chr10 22944152 22944281 -117372484 + AluSq SINE Alu 124 259 -54 323 266 79 96 chr10 22944655 22944832 -117371933 + MER5A DNA MER1_type 16 189 0 426 247 162 45 chr10 22945478 22945632 -117371133 + MIR3 SINE MIR 21 192 -16 360 0 0 0 chr10 22946111 22946151 -117370614 + (TG)n Simple_repeat Simple_repeat 2 41 0 1541 197 25 4 chr10 22946151 22946430 -117370335 - AluJo SINE Alu -27 285 1 23 0 0 0 chr10 22946734 22946757 -117370008 + AT_rich Low_complexity Low_complexity 1 23 0 2105 98 0 27 chr10 22946793 22947089 -117369676 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22947802 22947890 -117368875 + (CA)n Simple_repeat Simple_repeat 2 89 0 1435 193 13 27 chr10 22948471 22948772 -117367993 + AluJo SINE Alu 3 299 -13 23 0 0 0 chr10 22949586 22949609 -117367156 + AT_rich Low_complexity Low_complexity 1 23 0 598 279 97 21 chr10 22950942 22951297 -117365468 + MLT1J LTR MaLR 101 503 -8 197 315 14 41 chr10 22951536 22951609 -117365156 - L2 LINE L2 -19 3253 3183 5399 224 83 60 chr10 22951885 22952444 -117364321 - L1ME1 LINE L1 -5 6230 5685 1549 85 43 9 chr10 22952444 22952655 -117364110 - L1PA10 LINE L1 -1 6167 5950 5399 224 83 60 chr10 22952655 22952838 -117363927 - L1ME1 LINE L1 -550 5685 5508 2298 84 0 3 chr10 22952838 22953135 -117363630 - AluY SINE Alu -15 296 1 5399 224 83 60 chr10 22953135 22954806 -117361959 - L1ME1 LINE L1 -727 5508 3758 23073 74 11 2 chr10 22954808 22958531 -117358234 - L1PA6 LINE L1 -2 6152 2405 9014 89 2 5 chr10 22958531 22959765 -117357000 - L1P LINE L1 -1899 4247 3018 1022 251 130 22 chr10 22959768 22960214 -117356551 - L1ME1 LINE L1 -2453 3762 3269 7846 79 3 6 chr10 22960512 22962382 -117354383 + L1PA6 LINE L1 4278 6154 0 523 173 0 16 chr10 22962649 22962776 -117353989 + GA-rich Low_complexity Low_complexity 3 127 0 3723 226 63 35 chr10 22963480 22965800 -117350965 - L1ME1 LINE L1 -2938 3277 917 1370 228 11 58 chr10 22965804 22966185 -117350580 - MLT1A2 LTR MaLR -11 363 1 1671 244 89 55 chr10 22966185 22966294 -117350471 - L1ME1 LINE L1 -5472 924 820 1735 196 7 7 chr10 22966294 22966600 -117350165 - AluJo SINE Alu -6 306 1 1671 244 89 55 chr10 22966600 22967344 -117349421 - L1ME1 LINE L1 -5576 820 42 626 274 63 38 chr10 22967417 22967654 -117349111 + MIR SINE MIR 3 245 -17 426 209 64 0 chr10 22968891 22969001 -117347764 - L1MC4 LINE L1 0 8042 7926 233 254 35 21 chr10 22969001 22969143 -117347622 + (TA)n Simple_repeat Simple_repeat 2 145 0 * 251 153 38 61 chr10 22969045 22969176 -117347589 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1418 249 120 43 chr10 22969236 22969717 -117347048 - L1MC4 LINE L1 -150 7892 7449 1794 169 3 17 chr10 22969717 22970018 -117346747 + AluJo SINE Alu 1 297 -15 294 29 0 0 chr10 22970018 22970053 -117346712 + (TA)n Simple_repeat Simple_repeat 1 35 0 1418 249 120 43 chr10 22970053 22970288 -117346477 - L1MC4 LINE L1 -592 7450 7120 207 0 0 0 chr10 22970309 22970332 -117346433 + (A)n Simple_repeat Simple_repeat 1 23 0 265 386 58 0 chr10 22971228 22971399 -117345366 - L3 LINE CR1 -1 1576 1396 2143 123 0 0 chr10 22971633 22971956 -117344809 - AluSx SINE Alu 0 323 1 206 241 35 17 chr10 22973355 22973471 -117343294 + (TA)n Simple_repeat Simple_repeat 2 119 0 1644 189 3 26 chr10 22974301 22974613 -117342152 + AluJo SINE Alu 1 305 -7 357 125 0 0 chr10 22974825 22974881 -117341884 + (CA)n Simple_repeat Simple_repeat 1 56 0 195 261 92 0 chr10 22976193 22976258 -117340507 - MIR3 SINE MIR -25 183 113 267 156 45 97 chr10 22976280 22976322 -117340443 + L1MC5 LINE L1 6876 6919 -1090 2089 124 0 10 chr10 22976322 22976628 -117340137 + AluSg SINE Alu 1 303 -7 267 156 45 97 chr10 22976628 22976718 -117340047 + L1MC5 LINE L1 6919 7007 -1002 439 306 10 14 chr10 22976794 22977003 -117339762 + L1MC5 LINE L1 6984 7191 -770 574 244 35 103 chr10 22977155 22977667 -117339098 + L1MC5 LINE L1 7260 7736 -225 1200 134 13 38 chr10 22978656 22978895 -117337870 + L1MCa LINE L1 1701 1933 -4493 216 0 0 0 chr10 22978901 22978925 -117337840 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 576 198 0 20 chr10 22978940 22979041 -117337724 - FLAM_A SINE Alu -43 99 1 5103 217 24 24 chr10 22979041 22981054 -117335711 + L1MCa LINE L1 1938 3951 -2475 4480 179 30 9 chr10 22981607 22982806 -117333959 - L1MB7 LINE L1 -19 6165 4940 511 283 109 30 chr10 22983072 22983302 -117333463 + MIR SINE MIR 15 262 0 2137 126 3 13 chr10 22983569 22983871 -117332894 + AluSx SINE Alu 1 299 -13 247 293 75 35 chr10 22984464 22984638 -117332127 + MARNA DNA Mariner 104 284 -302 246 400 23 17 chr10 22985772 22985947 -117330818 + MER5A DNA MER1_type 13 188 -1 895 209 0 0 chr10 22985958 22986121 -117330644 - FRAM SINE Alu -13 163 1 424 271 187 23 chr10 22986709 22986923 -117329842 + MIR SINE MIR 13 261 -1 1468 179 69 35 chr10 22987279 22987569 -117329196 + AluJo SINE Alu 1 300 -12 275 67 44 0 chr10 22987569 22987614 -117329151 + GA-rich Low_complexity Low_complexity 1 47 0 431 311 196 9 chr10 22988223 22988442 -117328323 - MIR SINE MIR 0 262 3 22 0 0 0 chr10 22988446 22988468 -117328297 + AT_rich Low_complexity Low_complexity 1 22 0 1891 113 13 50 chr10 22989495 22989796 -117326969 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr10 22989798 22989819 -117326946 + AT_rich Low_complexity Low_complexity 1 21 0 1791 73 0 0 chr10 22990364 22990597 -117326168 + L1PA8 LINE L1 5938 6170 -2 1774 215 73 18 chr10 22990614 22991163 -117325602 + L1MC4 LINE L1 7463 8041 -1 263 376 97 18 chr10 22992133 22992298 -117324467 + L3b LINE CR1 1368 1545 -38 1141 138 69 62 chr10 22992306 22992566 -117324199 + MER1B DNA MER1_type 78 339 0 197 83 28 0 chr10 22992614 22992650 -117324115 + (TG)n Simple_repeat Simple_repeat 1 37 0 2296 108 3 0 chr10 22992793 22993098 -117323667 + AluSq SINE Alu 1 306 -7 349 326 57 14 chr10 22993264 22993405 -117323360 + MIR3 SINE MIR 42 188 -20 2115 131 0 3 chr10 22994070 22994375 -117322390 + AluSx SINE Alu 1 304 -8 187 319 112 35 chr10 22994377 22994493 -117322272 + MIR SINE MIR 29 153 -55 371 345 125 8 chr10 22994695 22995072 -117321693 + L1MC4a LINE L1 5412 5832 -1976 315 224 0 0 chr10 22995106 22995164 -117321601 + L2 LINE L2 3256 3313 0 316 308 72 37 chr10 22995174 22995388 -117321377 - MIR SINE MIR -43 219 3 212 211 0 0 chr10 22995666 22995704 -117321061 - L2 LINE L2 -16 3256 3219 187 366 98 0 chr10 22996946 22997129 -117319636 + L2 LINE L2 1656 1856 -1458 295 301 228 52 chr10 22997506 22997831 -117318934 - L2 LINE L2 -1 3312 2931 290 197 14 26 chr10 22997866 22997949 -117318816 + MER21A LTR ERV1 1 83 -780 242 158 134 85 chr10 22998044 22998126 -117318639 + MER21A LTR ERV1 70 155 -776 2157 123 0 7 chr10 22998142 22998451 -117318314 - AluSc SINE Alu -2 307 1 2589 188 66 88 chr10 22998492 22998915 -117317850 + MER21A LTR ERV1 115 513 -418 2203 130 0 0 chr10 22998915 22999216 -117317549 - AluSx SINE Alu -11 301 1 2589 188 66 88 chr10 22999216 22999608 -117317157 + MER21A LTR ERV1 513 912 -19 28 29 0 0 chr10 22999780 22999815 -117316950 + AT_rich Low_complexity Low_complexity 1 35 0 730 258 60 95 chr10 23001097 23001685 -117315080 + L2 LINE L2 2652 3313 0 820 163 8 0 chr10 23002095 23002224 -117314541 + FRAM SINE Alu 39 168 -8 454 213 16 63 chr10 23002741 23002868 -117313897 - MIR SINE MIR -50 212 92 1112 128 0 52 chr10 23002958 23003130 -117313635 - AluSg/x SINE Alu -21 291 129 27 29 0 0 chr10 23003130 23003164 -117313601 + AT_rich Low_complexity Low_complexity 1 34 0 1921 118 48 0 chr10 23003171 23003442 -117313323 - AluSg SINE Alu -26 284 1 2288 121 0 0 chr10 23003806 23004104 -117312661 + AluSx SINE Alu 1 298 -14 2830 90 11 54 chr10 23004454 23004548 -117312217 - L1MA2 LINE L1 0 6304 6208 2218 96 0 0 chr10 23004548 23004841 -117311924 + AluSg SINE Alu 1 293 -17 2830 90 11 54 chr10 23004841 23005211 -117311554 - L1MA2 LINE L1 -96 6208 5860 2050 130 3 7 chr10 23006917 23007216 -117309549 + AluSx SINE Alu 1 298 -14 1710 128 13 99 chr10 23007374 23007756 -117309009 + MLT1B LTR MaLR 37 385 -5 298 381 95 6 chr10 23007786 23007954 -117308811 - L3 LINE CR1 -1282 295 113 403 173 90 147 chr10 23007963 23008119 -117308646 - MIR SINE MIR 0 262 116 247 207 69 0 chr10 23008121 23008179 -117308586 - MIR SINE MIR -115 147 86 840 158 0 0 chr10 23010811 23010965 -117305800 - FLAM_C SINE Alu 0 154 1 1417 270 71 67 chr10 23011457 23012145 -117304620 + MER21B LTR ERV1 24 714 -149 405 240 80 29 chr10 23012574 23012749 -117304016 - MIR SINE MIR -4 258 75 181 325 120 40 chr10 23012741 23013015 -117303750 - L2 LINE L2 -417 2897 2602 * 188 296 56 0 chr10 23014766 23014837 -117301928 - MIR SINE MIR -57 205 131 298 77 0 0 chr10 23015230 23015269 -117301496 + 5S rRNA rRNA 2 40 -81 2284 51 0 0 chr10 23015610 23015883 -117300882 + AluY SINE Alu 39 311 0 467 271 130 5 chr10 23015883 23016075 -117300690 + MER112 DNA MER1_type 35 250 -10 314 348 87 5 chr10 23016195 23016402 -117300363 - MIR SINE MIR -7 255 32 622 276 45 71 chr10 23018121 23018400 -117298365 + L1MC4 LINE L1 7630 7915 -127 2388 80 0 7 chr10 23018400 23018701 -117298064 + AluY SINE Alu 1 299 -12 360 0 0 0 chr10 23018701 23018741 -117298024 + (TA)n Simple_repeat Simple_repeat 2 41 0 622 276 45 71 chr10 23018741 23018884 -117297881 + L1MC4 LINE L1 7913 8042 0 2318 112 3 0 chr10 23020687 23020999 -117295766 + AluSp SINE Alu 1 313 0 595 250 7 20 chr10 23021193 23021345 -117295420 + MIR SINE MIR 108 257 -5 24 0 0 0 chr10 23023477 23023501 -117293264 + GC_rich Low_complexity Low_complexity 1 24 0 486 283 35 45 chr10 23024798 23024996 -117291769 + MIR SINE MIR 43 238 -24 1891 146 0 42 chr10 23025626 23025934 -117290831 - AluJo SINE Alu -15 297 3 694 220 56 84 chr10 23026736 23027069 -117289696 + MLT1I LTR MaLR 98 547 -2 2487 73 3 0 chr10 23027158 23027461 -117289304 - AluY SINE Alu -7 304 1 191 261 261 13 chr10 23027891 23028048 -117288717 - L2 LINE L2 -1 3312 3117 1826 165 124 81 chr10 23028549 23028730 -117288035 + MLT1D LTR MaLR 1 173 -332 3869 123 36 2 chr10 23028730 23029313 -117287452 + LTR26 LTR ERV1 1 603 0 1826 165 124 81 chr10 23029313 23029489 -117287276 + MLT1D LTR MaLR 173 387 -118 2128 144 3 0 chr10 23029489 23029795 -117286970 + AluSx SINE Alu 1 307 -5 1826 165 124 81 chr10 23029795 23029920 -117286845 + MLT1D LTR MaLR 387 505 0 25 0 0 0 chr10 23030582 23030607 -117286158 + AT_rich Low_complexity Low_complexity 1 25 0 2057 144 0 3 chr10 23030613 23030911 -117285854 + AluSp SINE Alu 1 297 -16 314 140 0 0 chr10 23030931 23030981 -117285784 + L1PA8 LINE L1 6122 6171 -1 1739 181 0 13 chr10 23031823 23032122 -117284643 + AluJo SINE Alu 1 295 -17 1363 158 60 54 chr10 23032304 23032620 -117284145 - MER33 DNA MER1_type -2 322 5 239 308 0 33 chr10 23032879 23032996 -117283769 + GA-rich Low_complexity Low_complexity 4 176 0 2395 118 19 16 chr10 23033378 23033741 -117283024 + THE1B LTR MaLR 1 364 0 379 247 205 8 chr10 23034352 23034591 -117282174 + L1ME4a LINE L1 5814 6099 -22 2388 82 7 7 chr10 23035121 23035427 -117281338 - AluSx SINE Alu -2 310 5 22 0 0 0 chr10 23035865 23035887 -117280878 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr10 23035887 23035913 -117280852 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr10 23036128 23036150 -117280615 + AT_rich Low_complexity Low_complexity 1 22 0 390 21 0 0 chr10 23036150 23036197 -117280568 + (CA)n Simple_repeat Simple_repeat 2 48 0 416 189 0 63 chr10 23036200 23036295 -117280470 + MLT1A1 LTR MaLR 24 112 -253 1761 158 41 35 chr10 23036309 23036446 -117280319 + MER2 DNA MER2_type 1 136 -209 1715 109 0 0 chr10 23036446 23036676 -117280089 - MER30 DNA MER1_type 0 230 1 1761 158 41 35 chr10 23036676 23036880 -117279885 + MER2 DNA MER2_type 136 344 -1 384 22 0 0 chr10 23036881 23036926 -117279839 + (TG)n Simple_repeat Simple_repeat 2 46 0 251 167 100 0 chr10 23036945 23037005 -117279760 - L1MCa LINE L1 -4495 1931 1866 204 125 0 0 chr10 23037017 23037049 -117279716 + (CATA)n Simple_repeat Simple_repeat 2 33 0 935 129 13 13 chr10 23037073 23037222 -117279543 + THE1C LTR MaLR 216 375 0 2545 195 29 65 chr10 23037226 23037374 -117279391 - L1MCa LINE L1 -5798 628 476 416 66 0 16 chr10 23037374 23037435 -117279330 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1951 135 0 0 chr10 23037443 23037710 -117279055 - AluJb SINE Alu -45 267 1 2545 195 29 65 chr10 23037710 23038183 -117278582 - L1MCa LINE L1 -5957 469 21 2015 120 38 0 chr10 23038495 23038786 -117277979 - AluSq SINE Alu -11 302 1 1227 217 119 65 chr10 23038939 23039348 -117277417 + MLT1D LTR MaLR 1 441 -64 2348 76 0 16 chr10 23039348 23039663 -117277102 - AluY SINE Alu -1 310 1 1227 217 119 65 chr10 23039663 23039732 -117277033 + MLT1D LTR MaLR 441 505 0 214 352 88 8 chr10 23039945 23040070 -117276695 + L2 LINE L2 3137 3271 -1 1758 169 3 23 chr10 23040094 23040402 -117276363 + AluJo SINE Alu 1 302 -10 796 242 71 8 chr10 23041108 23041348 -117275417 - MIR SINE MIR -5 257 3 186 43 0 0 chr10 23042042 23042065 -117274700 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 1515 171 38 7 chr10 23042085 23042372 -117274393 - AluSx SINE Alu -9 303 8 28 0 0 0 chr10 23042515 23042543 -117274222 + AT_rich Low_complexity Low_complexity 1 28 0 2309 107 0 7 chr10 23042853 23043163 -117273602 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 23043167 23043249 -117273516 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 23043475 23043562 -117273203 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 23043812 23044110 -117272655 + AluJo SINE Alu 1 295 -17 394 240 20 60 chr10 23044354 23044504 -117272261 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 23044706 23044919 -117271846 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 23044929 23045118 -117271647 - AluJo SINE Alu 0 312 127 2046 116 42 0 chr10 23045138 23045422 -117271343 + AluSx SINE Alu 1 296 -16 1846 176 10 0 chr10 23046550 23046846 -117269919 - AluJo SINE Alu -13 299 1 314 250 0 0 chr10 23047143 23047207 -117269558 + MER91 DNA MER1_type 127 190 0 240 221 12 58 chr10 23047285 23047371 -117269394 + MLT1K LTR MaLR 486 567 -21 2411 93 0 0 chr10 23048575 23048876 -117267889 - AluSg SINE Alu -9 301 1 2211 113 0 0 chr10 23048880 23049217 -117267548 - AluSq SINE Alu 0 313 3 461 273 99 12 chr10 23049745 23049906 -117266859 - MER5B DNA MER1_type -3 175 1 3268 165 32 19 chr10 23050081 23050675 -117266090 + LTR26 LTR ERV1 1 602 -1 190 115 39 19 chr10 23051531 23051583 -117265182 + T-rich Low_complexity Low_complexity 3 55 0 1634 159 11 39 chr10 23051620 23051903 -117264862 - AluJo SINE Alu -33 279 5 22 0 0 0 chr10 23051910 23051932 -117264833 + AT_rich Low_complexity Low_complexity 1 22 0 442 253 108 6 chr10 23052368 23052526 -117264239 + MER63A DNA MER1_type 1 174 -36 551 284 51 33 chr10 23052534 23052814 -117263951 + LTR16A LTR ERVL 164 490 -1 2456 98 0 0 chr10 23052883 23053188 -117263577 - AluSx SINE Alu -7 305 1 1506 147 105 0 chr10 23053399 23053665 -117263100 + AluJo SINE Alu 1 294 -18 1857 146 121 34 chr10 23054038 23054511 -117262254 - MER69 DNA AcHobo 0 2526 2013 485 280 69 26 chr10 23054489 23054678 -117262087 - MER69 DNA AcHobo -641 585 389 * 2544 62 7 0 chr10 23055026 23055335 -117261430 - AluY SINE Alu 0 311 1 388 308 34 27 chr10 23056298 23056444 -117260321 + LTR67 LTR ERVL 4 150 -407 771 283 118 33 chr10 23056577 23056825 -117259940 - LTR16C LTR ERVL -12 479 189 1275 189 55 120 chr10 23056825 23057242 -117259523 + MLT1B LTR MaLR 1 390 0 771 283 118 33 chr10 23057242 23057357 -117259408 - LTR16C LTR ERVL -302 189 85 527 191 84 0 chr10 23057515 23057646 -117259119 + LTR67 LTR ERVL 411 552 -5 612 267 113 39 chr10 23057818 23058207 -117258558 + L1ME4a LINE L1 5582 5999 -122 3030 182 39 20 chr10 23059111 23059536 -117257229 - LTR26E LTR ERV1 0 622 180 2251 131 0 0 chr10 23059536 23059848 -117256917 - AluSx SINE Alu 0 312 1 3030 182 39 20 chr10 23059848 23060032 -117256733 - LTR26E LTR ERV1 -442 180 1 824 250 74 46 chr10 23060108 23060392 -117256373 + LTR33 LTR ERVL 38 329 -192 3926 138 25 0 chr10 23060532 23061120 -117255645 - LTR26 LTR ERV1 0 603 1 408 303 28 0 chr10 23061120 23061262 -117255503 - MLT1J2 LTR MaLR -52 398 253 629 224 25 25 chr10 23061295 23061456 -117255309 - MLT1J2 LTR MaLR -281 169 9 313 306 81 8 chr10 23061614 23061738 -117255027 - MLT1J LTR MaLR -146 365 233 610 66 11 44 chr10 23061862 23061953 -117254812 - MER53 DNA DNA 0 189 102 241 333 0 0 chr10 23062040 23062118 -117254647 - MLT1L LTR MaLR -537 78 1 421 348 29 22 chr10 23062128 23062401 -117254364 + MLT1L LTR MaLR 210 484 -131 2176 121 7 7 chr10 23062684 23062989 -117253776 + AluSq SINE Alu 1 305 -8 1777 164 33 7 chr10 23063771 23064075 -117252690 + AluJb SINE Alu 1 312 0 296 172 66 25 chr10 23064583 23064705 -117252060 + (TA)n Simple_repeat Simple_repeat 1 127 0 241 194 54 31 chr10 23064734 23064863 -117251902 + (TA)n Simple_repeat Simple_repeat 1 132 0 242 208 56 28 chr10 23065612 23065684 -117251081 - MIR SINE MIR -20 242 169 309 113 14 28 chr10 23066705 23066776 -117249989 + (TA)n Simple_repeat Simple_repeat 2 71 0 201 241 0 0 chr10 23066937 23066991 -117249774 + GA-rich Low_complexity Low_complexity 3 56 0 664 195 0 27 chr10 23067040 23067225 -117249540 + (CA)n Simple_repeat Simple_repeat 1 180 0 229 330 9 0 chr10 23067283 23067392 -117249373 - L1ME4a LINE L1 -21 6100 5991 985 162 7 0 chr10 23067729 23067883 -117248882 + FRAM SINE Alu 1 146 -30 593 228 43 5 chr10 23068023 23068207 -117248558 - MER69 DNA AcHobo -57 2469 2279 1763 174 0 34 chr10 23068217 23068545 -117248220 - AluJb SINE Alu 0 318 1 1160 286 70 15 chr10 23068548 23068947 -117247818 - MER69 DNA AcHobo -1974 552 132 858 113 0 0 chr10 23068948 23069063 -117247702 + AluSg SINE Alu 1 115 -195 2191 139 0 0 chr10 23069065 23069375 -117247390 + AluSg SINE Alu 1 310 0 1499 87 0 5 chr10 23069383 23069578 -117247187 + AluSg SINE Alu 104 297 -15 407 185 185 0 chr10 23069578 23069697 -117247068 - MER69 DNA AcHobo -1085 141 1 475 319 31 12 chr10 23070125 23070288 -117246477 + MIR SINE MIR 20 185 -77 721 264 81 65 chr10 23071149 23071683 -117245082 - MER34 LTR ERV1 0 542 1 25 65 0 0 chr10 23071802 23071848 -117244917 + AT_rich Low_complexity Low_complexity 1 46 0 2462 156 75 22 chr10 23072050 23072487 -117244278 - L1 LINE L1 -1357 4789 4320 2235 110 7 0 chr10 23072487 23072787 -117243978 - AluSq SINE Alu -10 303 2 2462 156 75 22 chr10 23072787 23072854 -117243911 - L1 LINE L1 -1826 4320 4258 * 3658 151 0 2 chr10 23072846 23073450 -117243315 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 23073453 23073735 -117243030 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 23073742 23073881 -117242884 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 23074074 23074364 -117242401 - AluSx SINE Alu -4 308 17 1414 173 0 0 chr10 23074765 23074985 -117241780 - AluSq SINE Alu -93 220 1 705 223 0 0 chr10 23074995 23075125 -117241640 - FLAM_C SINE Alu 0 133 4 215 181 21 32 chr10 23075223 23075317 -117241448 + CT-rich Low_complexity Low_complexity 2 94 0 274 204 9 37 chr10 23075372 23075480 -117241285 + CT-rich Low_complexity Low_complexity 2 106 0 1547 155 44 44 chr10 23075940 23076237 -117240528 - AluJo SINE Alu -11 301 5 781 158 30 8 chr10 23076239 23076372 -117240393 - AluJo SINE Alu -175 137 2 2267 117 0 0 chr10 23076548 23076855 -117239910 - AluSg SINE Alu -3 307 1 1167 139 28 0 chr10 23077088 23077303 -117239462 - AluSp SINE Alu -12 301 81 200 222 0 16 chr10 23077561 23077624 -117239141 + T-rich Low_complexity Low_complexity 1 62 0 931 96 0 22 chr10 23078547 23078682 -117238083 + FLAM_C SINE Alu 1 132 -1 7371 125 28 6 chr10 23078979 23079147 -117237618 - L1MA3 LINE L1 0 7724 7561 2210 130 0 0 chr10 23079147 23079446 -117237319 - AluSq SINE Alu -14 299 1 7371 125 28 6 chr10 23079446 23081515 -117235250 - L1MA3 LINE L1 -163 7561 5438 * 11920 145 26 1 chr10 23081492 23083338 -117233427 - L1MA3 LINE L1 -5657 1908 15 1319 27 0 22 chr10 23084040 23084224 -117232541 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1621 209 3 3 chr10 23084526 23084837 -117231928 - AluJo SINE Alu -1 311 1 339 255 112 81 chr10 23085337 23085498 -117231267 + MLT1I LTR MaLR 244 409 0 1758 186 0 0 chr10 23085522 23085812 -117230953 + AluJb SINE Alu 1 290 -22 201 247 216 10 chr10 23086101 23086198 -117230567 + MIR SINE MIR 35 151 -111 226 352 80 0 chr10 23086586 23086711 -117230054 + MIR SINE MIR 20 154 -108 2130 130 0 0 chr10 23086988 23087288 -117229477 - AluSx SINE Alu -12 300 1 359 279 70 8 chr10 23087485 23087614 -117229151 - L2 LINE L2 0 3272 3136 2456 90 3 0 chr10 23087641 23087952 -117228813 + AluSx SINE Alu 1 312 0 1966 166 17 17 chr10 23088181 23088525 -117228240 + MER49 LTR ERV1 1 344 -579 2867 117 5 7 chr10 23088680 23089089 -117227676 - MER1A DNA MER1_type 0 529 122 799 333 32 3 chr10 23089144 23089426 -117227339 - L2 LINE L2 -571 2743 2454 1746 157 54 0 chr10 23089451 23089731 -117227034 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 23089862 23089916 -117226849 + (TA)n Simple_repeat Simple_repeat 1 53 0 247 234 21 43 chr10 23089917 23090011 -117226754 + L1MC4 LINE L1 6614 6705 -1337 741 144 27 0 chr10 23090024 23090325 -117226440 + (TA)n Simple_repeat Simple_repeat 1 309 0 369 0 0 0 chr10 23090392 23090433 -117226332 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 23090474 23090502 -117226263 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2139 174 62 8 chr10 23090599 23090985 -117225780 + MSTB LTR MaLR 20 426 0 1902 150 0 10 chr10 23091396 23091690 -117225075 + AluJo SINE Alu 1 291 -21 1708 138 87 0 chr10 23091722 23091998 -117224767 - AluSx SINE Alu -12 300 1 2283 115 0 10 chr10 23092720 23093032 -117223733 - AluSx SINE Alu -3 309 1 748 267 36 24 chr10 23093193 23093440 -117223325 - MIR SINE MIR 0 262 13 2231 110 0 0 chr10 23093557 23093888 -117222877 - AluSx SINE Alu 0 312 1 2092 130 0 0 chr10 23093997 23094282 -117222483 - AluSx SINE Alu -19 293 9 641 148 0 0 chr10 23094399 23094507 -117222258 + AluSg/x SINE Alu 202 309 -3 306 266 9 126 chr10 23094657 23094787 -117221978 - MER5A DNA MER1_type 0 189 92 2413 84 3 0 chr10 23094787 23095085 -117221680 - AluSp SINE Alu -14 299 1 306 266 9 126 chr10 23095085 23095168 -117221597 - MER5A DNA MER1_type -97 92 1 1227 137 0 0 chr10 23095747 23095922 -117220843 - AluSq SINE Alu -138 175 1 180 321 84 46 chr10 23095928 23096059 -117220706 + MER5B DNA MER1_type 41 176 -2 1526 145 83 18 chr10 23096957 23097233 -117219532 - AluJo SINE Alu -17 295 2 494 61 0 0 chr10 23097234 23097300 -117219465 - L1 LINE L1 -1823 4323 4258 * 3658 151 0 2 chr10 23097292 23097896 -117218869 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 23097899 23098181 -117218584 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 23098188 23098327 -117218438 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 23098520 23098810 -117217955 - AluSx SINE Alu -4 308 17 948 102 0 22 chr10 23099185 23099322 -117217443 + AluJo SINE Alu 1 134 -178 2139 174 62 8 chr10 23099770 23100156 -117216609 - MSTB LTR MaLR 0 426 20 252 0 0 0 chr10 23100253 23100281 -117216484 + (CAGTC)n Simple_repeat Simple_repeat 4 31 0 369 0 0 0 chr10 23100322 23100363 -117216402 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 741 144 27 0 chr10 23100429 23100731 -117216034 + (TA)n Simple_repeat Simple_repeat 1 310 0 247 234 21 43 chr10 23100744 23100838 -117215927 - L1MC4 LINE L1 -1337 6705 6614 203 204 0 19 chr10 23100839 23100893 -117215872 + (TA)n Simple_repeat Simple_repeat 2 54 0 1719 161 54 0 chr10 23101024 23101304 -117215461 + AluJb SINE Alu 1 295 -17 799 333 32 3 chr10 23101329 23101611 -117215154 + L2 LINE L2 2454 2743 -571 2867 117 5 7 chr10 23101666 23102075 -117214690 + MER1A DNA MER1_type 122 529 0 1966 166 17 17 chr10 23102230 23102574 -117214191 - MER49 LTR ERV1 -579 344 1 1495 141 3 141 chr10 23102803 23102991 -117213774 - AluJo SINE Alu 0 312 100 207 0 0 0 chr10 23102991 23103014 -117213751 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2048 125 0 7 chr10 23103014 23103301 -117213464 - AluSx SINE Alu -27 285 1 1495 141 3 141 chr10 23103301 23103473 -117213292 - AluJo SINE Alu -210 102 1 1075 147 80 46 chr10 23103745 23103855 -117212910 - L1MA4A LINE L1 -2 6301 6196 2319 118 3 0 chr10 23103855 23104159 -117212606 - AluSx SINE Alu -7 305 1 1075 147 80 46 chr10 23104159 23104286 -117212479 - L1MA4A LINE L1 -107 6196 6056 1485 177 0 93 chr10 23104714 23104877 -117211888 - MLT1D LTR MaLR -192 313 197 3869 123 36 2 chr10 23104877 23105460 -117211305 - LTR26 LTR ERV1 0 603 1 1485 177 0 93 chr10 23105460 23105641 -117211124 - MLT1D LTR MaLR -308 197 1 191 261 261 13 chr10 23106142 23106299 -117210466 + L2 LINE L2 3117 3312 -1 2342 64 3 0 chr10 23106729 23107072 -117209693 + AluY SINE Alu 1 344 0 644 200 7 37 chr10 23107278 23107413 -117209352 - FLAM_A SINE Alu 0 142 12 1931 116 11 14 chr10 23107475 23107760 -117209005 + AluSx SINE Alu 27 310 -2 483 171 0 0 chr10 23107917 23107993 -117208772 - AluJ/FRAM SINE Alu -20 292 217 225 94 0 0 chr10 23108020 23108052 -117208713 + (A)n Simple_repeat Simple_repeat 1 32 0 702 172 78 0 chr10 23108056 23108184 -117208581 + AluJo SINE Alu 6 143 -169 2805 85 3 0 chr10 23109007 23109411 -117207354 - L1PA2 LINE L1 0 6155 5770 1950 160 3 10 chr10 23109424 23109737 -117207028 - AluJb SINE Alu -1 311 1 2338 122 75 0 chr10 23110220 23110596 -117206169 - L1MA9 LINE L1 -374 5938 5535 2300 110 0 3 chr10 23110842 23111141 -117205624 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr10 23112663 23112685 -117204080 + AT_rich Low_complexity Low_complexity 1 22 0 248 121 0 0 chr10 23112685 23112718 -117204047 + Alu SINE Alu 1 33 -269 223 242 17 75 chr10 23113055 23113175 -117203590 + C-rich Low_complexity Low_complexity 5 117 0 318 260 22 50 chr10 23113177 23113358 -117203407 + (CCCCG)n Simple_repeat Simple_repeat 3 178 0 230 256 30 45 chr10 23113445 23113578 -117203187 + C-rich Low_complexity Low_complexity 3 133 0 896 156 9 85 chr10 23113759 23113983 -117202782 - AluJo SINE Alu -105 207 1 1009 159 53 43 chr10 23114276 23114483 -117202282 + MER3 DNA MER1_type 1 209 0 1319 157 25 103 chr10 23114760 23114896 -117201869 + AluYb8 SINE Alu 3 148 -170 2148 114 0 3 chr10 23114896 23115202 -117201563 + AluSx SINE Alu 1 305 -7 1319 157 25 103 chr10 23115202 23115384 -117201381 + AluYb8 SINE Alu 148 296 -22 328 200 0 15 chr10 23115666 23115731 -117201034 - MER82 DNA MER2_type -580 73 10 1869 158 0 3 chr10 23115739 23116037 -117200728 + AluSx SINE Alu 9 305 -7 679 231 30 0 chr10 23116124 23116258 -117200507 + LTR16C LTR ERVL 146 283 -208 1090 202 20 0 chr10 23116259 23116462 -117200303 + MER58A DNA MER1_type 2 208 -16 683 198 198 0 chr10 23116475 23116657 -117200108 + LTR16C LTR ERVL 274 491 0 1659 181 8 77 chr10 23116795 23116954 -117199811 + MLT1A1 LTR MaLR 1 169 -196 1987 108 63 0 chr10 23116954 23117241 -117199524 + AluSx SINE Alu 6 310 -2 1659 181 8 77 chr10 23117241 23117446 -117199319 + MLT1A1 LTR MaLR 169 340 -25 261 0 0 0 chr10 23117446 23117475 -117199290 + (T)n Simple_repeat Simple_repeat 1 29 0 460 214 39 65 chr10 23118041 23118085 -117198680 + MIR SINE MIR 113 157 -105 2368 200 10 79 chr10 23118085 23118189 -117198576 + MER87 LTR ERV1 1 111 -430 2241 97 0 0 chr10 23118189 23118489 -117198276 - AluSq SINE Alu -13 300 1 2368 200 10 79 chr10 23118489 23118965 -117197800 + MER87 LTR ERV1 111 541 0 460 214 39 65 chr10 23118965 23119074 -117197691 + MIR SINE MIR 157 262 0 1624 172 47 0 chr10 23120497 23120793 -117195972 - AluJb SINE Alu -2 310 1 437 259 68 132 chr10 23122039 23122579 -117194186 - MLT1K LTR MaLR -37 551 46 1461 125 0 26 chr10 23122868 23123100 -117193665 + AluSg/x SINE Alu 85 310 -2 830 235 6 0 chr10 23123137 23123307 -117193458 + MIR SINE MIR 92 262 0 1751 126 0 30 chr10 23123313 23123445 -117193320 - AluSq SINE Alu -52 261 140 2173 109 0 0 chr10 23123445 23123749 -117193016 - AluSq SINE Alu -9 304 1 1751 126 0 30 chr10 23123749 23123885 -117192880 - AluSq SINE Alu -173 140 1 708 186 0 0 chr10 23123912 23124030 -117192735 - FRAM SINE Alu -58 118 1 400 253 48 27 chr10 23124044 23124190 -117192575 + LTR16C LTR ERVL 341 489 -2 2207 75 0 0 chr10 23124286 23124567 -117192198 - AluY SINE Alu -29 282 2 326 272 71 65 chr10 23124675 23124844 -117191921 - MIR SINE MIR -21 241 72 1720 195 65 24 chr10 23125064 23125329 -117191436 + MER63B DNA MER1_type 1 291 -771 1511 184 0 27 chr10 23125329 23125623 -117191142 - AluJo SINE Alu -26 286 1 1720 195 65 24 chr10 23125623 23125772 -117190993 + MER63B DNA MER1_type 291 432 -4 1806 151 7 0 chr10 23125804 23126089 -117190676 + AluSx SINE Alu 1 287 -25 2177 68 51 3 chr10 23126161 23126454 -117190311 - AluSg SINE Alu -3 307 1 734 214 107 41 chr10 23126534 23126730 -117190035 + MER3 DNA MER1_type 1 209 0 933 177 17 0 chr10 23127557 23127732 -117189033 + AluSg/x SINE Alu 133 310 -2 1526 169 59 0 chr10 23127746 23128018 -117188747 + AluJo SINE Alu 1 288 -24 2157 108 0 3 chr10 23128323 23128620 -117188145 + AluSq SINE Alu 1 296 -17 1721 112 93 0 chr10 23128953 23129222 -117187543 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 23129487 23129538 -117187227 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 23129837 23129880 -117186885 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 736 111 0 0 chr10 23130248 23130347 -117186418 - AluS SINE Alu -213 100 2 816 148 0 7 chr10 23130450 23130585 -117186180 + AluJb SINE Alu 85 218 -94 242 170 0 19 chr10 23130585 23130638 -117186127 + FAM SINE Alu 125 176 -3 1433 186 0 39 chr10 23130648 23130960 -117185805 + AluJo SINE Alu 1 300 -12 1091 117 0 6 chr10 23131306 23131488 -117185277 - AluSg/x SINE Alu 0 304 124 1990 102 25 0 chr10 23131499 23131773 -117184992 - AluY SINE Alu -30 281 1 255 280 204 0 chr10 23131911 23132004 -117184761 + L2 LINE L2 3149 3260 -12 1064 224 86 4 chr10 23132005 23132260 -117184505 + L1ME1 LINE L1 5487 5762 -404 630 143 0 0 chr10 23132280 23132371 -117184394 + AluJ/FLAM SINE Alu 2 92 -220 1327 142 77 31 chr10 23132371 23132631 -117184134 + AluJo SINE Alu 30 301 -11 1024 184 32 28 chr10 23132632 23132646 -117184119 + L1ME1 LINE L1 5776 5788 -378 2261 130 122 10 chr10 23132646 23133031 -117183734 + MSTA LTR MaLR 1 428 0 1024 184 32 28 chr10 23133031 23133234 -117183531 + L1ME1 LINE L1 5788 5994 -172 303 327 0 35 chr10 23133254 23133367 -117183398 - MLT1J LTR MaLR -99 412 304 726 190 2 7 chr10 23133372 23133521 -117183244 - L1MB4 LINE L1 -130 6038 5889 1221 147 0 15 chr10 23133871 23134068 -117182697 - AluJb SINE Alu -34 278 85 3638 151 10 16 chr10 23134179 23134790 -117181975 - L1MB3 LINE L1 -259 5924 5318 843 211 6 0 chr10 23134795 23134970 -117181795 - FRAM SINE Alu 0 176 1 1216 218 26 53 chr10 23134970 23135350 -117181415 - L1MB3 LINE L1 -820 5326 4957 239 103 13 51 chr10 23135359 23135437 -117181328 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 199 26 0 79 chr10 23135502 23135540 -117181225 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1952 146 3 0 chr10 23135560 23135855 -117180910 + AluSx SINE Alu 1 296 -16 3224 88 20 24 chr10 23135876 23136331 -117180434 + MLT2A2 LTR ERVL 1 453 0 1845 92 81 15 chr10 23136407 23136678 -117180087 + AluSq SINE Alu 1 289 -24 346 209 198 0 chr10 23137239 23137325 -117179440 + MLT1C LTR MaLR 1 103 -364 1507 175 111 47 chr10 23137343 23137686 -117179079 + MLT1A1 LTR MaLR 1 365 0 2089 118 3 0 chr10 23138452 23138749 -117178016 + AluSp SINE Alu 1 298 -15 951 125 0 7 chr10 23138758 23138902 -117177863 + AluSp SINE Alu 1 143 -170 215 336 48 40 chr10 23139906 23140031 -117176734 + L2 LINE L2 3144 3269 -3 2176 84 9 37 chr10 23140360 23140682 -117176083 + AluSq SINE Alu 1 313 0 2314 71 3 0 chr10 23141678 23141972 -117174793 + AluY SINE Alu 1 295 -16 1721 112 93 0 chr10 23142304 23142573 -117174192 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 23142838 23142889 -117173876 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 23143188 23143231 -117173534 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1866 159 0 10 chr10 23143862 23144176 -117172589 + AluJb SINE Alu 1 311 -1 2617 80 42 13 chr10 23144187 23144573 -117172192 + L1PA15 LINE L1 5768 6164 -1 1608 130 0 20 chr10 23145238 23145492 -117171273 - AluSx SINE Alu -6 306 58 300 135 38 38 chr10 23145817 23145964 -117170801 + GA-rich Low_complexity Low_complexity 1 147 0 28 48 0 0 chr10 23145985 23146027 -117170738 + AT_rich Low_complexity Low_complexity 1 42 0 1085 124 20 50 chr10 23146113 23146314 -117170451 - AluSg/x SINE Alu -15 295 101 1181 392 7 33 chr10 23146314 23146620 -117170145 + AluJo SINE Alu 3 300 -2 223 265 0 29 chr10 23146772 23146840 -117169925 + (CATA)n Simple_repeat Simple_repeat 4 69 0 829 186 0 2 chr10 23147004 23147240 -117169525 + AluJo SINE Alu 5 275 -37 1083 36 42 12 chr10 23147244 23147412 -117169353 + (GAAA)n Simple_repeat Simple_repeat 2 174 0 2510 68 0 0 chr10 23147412 23147723 -117169042 + AluY SINE Alu 1 311 0 546 266 6 19 chr10 23147809 23147967 -117168798 - MIR SINE MIR -33 229 74 736 179 0 8 chr10 23148115 23148249 -117168516 - FLAM_C SINE Alu 0 133 1 2183 102 0 0 chr10 23148792 23149087 -117167678 - AluSx SINE Alu -17 295 1 2161 123 0 0 chr10 23149253 23149555 -117167210 - AluSx SINE Alu -8 304 3 2314 79 3 3 chr10 23149802 23150105 -117166660 - AluSp SINE Alu -10 303 1 1517 173 14 14 chr10 23150257 23150546 -117166219 - AluJo SINE Alu -23 289 1 2364 70 0 16 chr10 23150670 23150984 -117165781 - AluY SINE Alu -2 309 1 1903 138 10 0 chr10 23151372 23151670 -117165095 + AluJb SINE Alu 1 301 -11 767 191 0 0 chr10 23151932 23152063 -117164702 + FLAM_A SINE Alu 1 131 -2 2110 84 11 0 chr10 23152650 23152935 -117163830 + AluSq SINE Alu 1 288 -25 292 282 47 0 chr10 23152946 23153031 -117163734 + L2 LINE L2 2707 2795 -519 255 61 0 0 chr10 23153244 23153277 -117163488 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 192 129 65 0 chr10 23153369 23153400 -117163365 + MIR SINE MIR 222 254 -8 1770 145 28 3 chr10 23153786 23154075 -117162690 - AluJo SINE Alu -16 296 1 230 228 123 0 chr10 23154233 23154290 -117162475 + MLT1K LTR MaLR 502 565 -23 336 283 88 25 chr10 23154740 23154899 -117161866 - MIR SINE MIR 0 262 94 561 177 11 33 chr10 23154905 23155086 -117161679 + CT-rich Low_complexity Low_complexity 2 178 0 22 0 0 0 chr10 23155419 23155441 -117161324 + AT_rich Low_complexity Low_complexity 1 22 0 1457 199 7 17 chr10 23155798 23155935 -117160830 + AluJo SINE Alu 1 138 -174 1855 118 0 14 chr10 23155935 23156214 -117160551 + AluSx SINE Alu 23 297 -15 1457 199 7 17 chr10 23156214 23156378 -117160387 + AluJo SINE Alu 138 299 -13 830 141 0 0 chr10 23156665 23156786 -117159979 - AluSg/x SINE Alu -60 252 132 1500 134 5 0 chr10 23156786 23157009 -117159756 - AluSx SINE Alu -88 224 1 2032 102 0 0 chr10 23157686 23157960 -117158805 + AluSx SINE Alu 21 294 -18 315 113 0 0 chr10 23159491 23159544 -117157221 + (A)n Simple_repeat Simple_repeat 1 53 0 2039 96 33 7 chr10 23161104 23161406 -117155359 - AluSg SINE Alu 0 310 1 2178 120 0 0 chr10 23161507 23161815 -117154950 - AluSx SINE Alu -4 308 1 3719 142 87 22 chr10 23162031 23162770 -117153995 - LTR48 LTR ERV1 0 787 1 561 274 44 0 chr10 23163046 23163181 -117153584 - MER58B DNA MER1_type -1 340 200 2089 106 0 3 chr10 23163892 23164184 -117152581 + AluSg1 SINE Alu 1 291 -18 294 143 0 0 chr10 23164188 23164237 -117152528 + (TA)n Simple_repeat Simple_repeat 2 50 0 402 156 26 0 chr10 23164691 23164768 -117151997 + AluSp/q SINE Alu 225 303 0 562 131 19 0 chr10 23164770 23164877 -117151888 - L1MA4A LINE L1 -231 6072 5964 2123 65 43 0 chr10 23165222 23165500 -117151265 - AluY SINE Alu -20 291 2 968 147 147 0 chr10 23165524 23165701 -117151064 - AluJo SINE Alu -26 286 84 917 335 64 22 chr10 23166016 23166467 -117150298 + L3b LINE CR1 1111 1580 -3 325 247 124 0 chr10 23167380 23167477 -117149288 + L2 LINE L2 3189 3297 -16 1477 158 40 0 chr10 23167506 23167759 -117149006 - AluJo SINE Alu -49 263 1 1546 211 63 0 chr10 23168464 23168795 -117147970 - L1PB4 LINE L1 -17 6139 5788 1540 32 0 11 chr10 23168795 23168983 -117147782 - AluY SINE Alu -12 299 114 322 116 0 0 chr10 23169084 23169127 -117147638 - Alu SINE Alu -257 44 2 2008 129 0 0 chr10 23169127 23169421 -117147344 - AluSg SINE Alu -16 294 1 527 251 89 17 chr10 23169476 23169655 -117147110 - MIR SINE MIR -1 261 70 537 233 95 42 chr10 23169701 23169963 -117146802 - L1MC5 LINE L1 -369 7592 7317 274 183 0 70 chr10 23169979 23170050 -117146715 - L1MC5 LINE L1 -2362 5446 5381 1643 187 0 0 chr10 23170062 23170351 -117146414 - AluSx SINE Alu -21 291 3 2118 82 0 23 chr10 23170757 23171060 -117145705 - AluY SINE Alu -15 296 1 1658 146 25 55 chr10 23171929 23172284 -117144481 - MER4A LTR ERV1 0 664 262 609 133 10 10 chr10 23172285 23172383 -117144382 - MER4A LTR ERV1 -566 98 1 800 200 19 0 chr10 23172535 23172690 -117144075 - FRAM SINE Alu -15 161 4 1860 127 0 37 chr10 23173371 23173695 -117143070 - AluSx SINE Alu 0 312 1 957 180 172 27 chr10 23173805 23174066 -117142699 + MER46C DNA MER2_type 12 310 -28 4048 91 0 30 chr10 23174067 23174455 -117142310 - MER41A LTR ERV1 -1 553 186 2209 83 0 35 chr10 23174455 23174768 -117141997 - AluSx SINE Alu -10 302 1 4048 91 0 30 chr10 23174768 23174949 -117141816 - MER41A LTR ERV1 -368 186 1 199 200 60 0 chr10 23175271 23175321 -117141444 + L2 LINE L2 3261 3313 0 1713 203 27 25 chr10 23175702 23176107 -117140658 + L1MC1 LINE L1 5922 6327 -6 200 200 0 0 chr10 23176113 23176148 -117140617 + A-rich Low_complexity Low_complexity 2 36 0 703 195 0 0 chr10 23176150 23176273 -117140492 + FLAM_A SINE Alu 1 123 -10 1951 114 32 23 chr10 23176696 23177004 -117139761 + AluSx SINE Alu 1 311 -1 487 232 30 0 chr10 23177752 23177830 -117138935 + MER58B DNA MER1_type 1 84 -257 1832 135 34 3 chr10 23177830 23178126 -117138639 - AluSx SINE Alu -7 305 1 487 232 30 0 chr10 23178126 23178146 -117138619 + MER58B DNA MER1_type 84 102 -239 829 153 42 58 chr10 23178146 23178335 -117138430 + AluJo SINE Alu 127 312 0 979 216 19 9 chr10 23178345 23178558 -117138207 + MER58B DNA MER1_type 127 341 0 462 240 20 60 chr10 23178760 23178910 -117137855 + MIR3 SINE MIR 35 178 -30 1581 168 3 13 chr10 23179154 23179452 -117137313 - AluJo SINE Alu -17 295 1 366 207 0 35 chr10 23179702 23179789 -117136976 + FLAM SINE Alu 49 132 -1 316 281 12 0 chr10 23180015 23180097 -117136668 - MIR SINE MIR -78 184 102 2177 113 0 3 chr10 23180101 23180410 -117136355 + AluSx SINE Alu 1 308 -4 850 159 0 0 chr10 23180461 23180599 -117136166 - AluJb SINE Alu -9 303 166 1440 160 0 4 chr10 23180699 23180936 -117135829 + AluSg/x SINE Alu 71 306 -6 2126 86 0 71 chr10 23180937 23181263 -117135502 + AluSp SINE Alu 1 303 -10 447 279 171 8 chr10 23181286 23181544 -117135221 - LTR16C LTR ERVL -4 487 188 901 212 4 85 chr10 23181621 23181844 -117134921 - MLT1E LTR MaLR -30 563 360 1293 113 0 49 chr10 23181844 23182048 -117134717 + Tigger2a DNA MER2_type 1 194 -240 48 0 0 0 chr10 23182048 23182096 -117134669 + AT_rich Low_complexity Low_complexity 1 48 0 352 115 52 21 chr10 23182100 23182175 -117134590 + Tigger2a DNA MER2_type 193 273 -2445 1864 146 0 0 chr10 23182175 23182462 -117134303 + AluSx SINE Alu 1 287 -25 352 115 52 21 chr10 23182462 23182482 -117134283 + Tigger2a DNA MER2_type 273 291 -153 1019 187 21 11 chr10 23182489 23182676 -117134089 + Tigger2a DNA MER2_type 256 444 0 740 245 224 14 chr10 23182678 23182968 -117133797 - MLT1E LTR MaLR -240 353 3 209 302 0 0 chr10 23183505 23183558 -117133207 - L3 LINE CR1 -186 1391 1339 223 349 71 75 chr10 23183643 23183898 -117132867 - L3 LINE CR1 -483 1094 841 231 361 108 8 chr10 23184151 23184281 -117132484 - MIR SINE MIR -70 192 50 1519 167 20 27 chr10 23184287 23184587 -117132178 - AluJo SINE Alu -3 309 12 846 129 62 33 chr10 23184604 23184637 -117132128 - L1MA9 LINE L1 -1 6299 6268 2011 87 20 47 chr10 23184637 23184935 -117131830 + AluY SINE Alu 2 291 -20 846 129 62 33 chr10 23184935 23185075 -117131690 - L1MA9 LINE L1 -32 6268 6127 1054 110 0 0 chr10 23185075 23185229 -117131536 + AluSq SINE Alu 1 154 -159 1397 112 0 0 chr10 23185330 23185527 -117131238 + AluSg/x SINE Alu 106 302 -8 1871 151 3 28 chr10 23185983 23186301 -117130464 - AluJo SINE Alu -2 310 1 266 143 0 0 chr10 23186635 23186677 -117130088 + L1MB3 LINE L1 5398 5439 -744 2182 87 7 0 chr10 23186684 23186970 -117129795 + AluSx SINE Alu 6 293 -19 405 143 0 0 chr10 23187011 23187074 -117129691 + Alu SINE Alu 234 296 -16 3761 143 19 36 chr10 23187080 23187489 -117129276 + L1MB3 LINE L1 5435 5829 -354 2187 98 13 0 chr10 23187489 23187796 -117128969 + AluSp SINE Alu 1 311 -2 3761 143 19 36 chr10 23187796 23188076 -117128689 + L1MB3 LINE L1 5829 6112 -71 2182 101 13 0 chr10 23188137 23188263 -117128502 + AluSx SINE Alu 1 124 -188 225 0 0 0 chr10 23188263 23188288 -117128477 + (CA)n Simple_repeat Simple_repeat 2 26 0 2182 101 13 0 chr10 23188288 23188467 -117128298 + AluSx SINE Alu 124 310 -2 1615 193 0 0 chr10 23189266 23189567 -117127198 - AluJo SINE Alu -11 301 1 26 30 0 0 chr10 23189719 23189752 -117127013 + AT_rich Low_complexity Low_complexity 1 33 0 332 316 97 65 chr10 23189752 23190164 -117126601 - L1M4 LINE L1 -1529 4617 4193 189 0 0 0 chr10 23190694 23190715 -117126050 + (T)n Simple_repeat Simple_repeat 1 21 0 1141 118 0 0 chr10 23191087 23191248 -117125517 + AluSp SINE Alu 137 297 -16 1009 208 95 0 chr10 23191249 23191480 -117125285 - L1PB4 LINE L1 -12 6144 5892 194 263 70 0 chr10 23191590 23191647 -117125118 - MIR SINE MIR -70 192 132 462 224 42 55 chr10 23191673 23191838 -117124927 + MER31B LTR ERV1 17 179 -287 2289 80 0 10 chr10 23191979 23192281 -117124484 - AluSq SINE Alu -14 299 1 2288 96 0 0 chr10 23192281 23192582 -117124183 - AluSc SINE Alu -8 301 1 50 31 0 0 chr10 23192715 23192779 -117123986 + AT_rich Low_complexity Low_complexity 1 64 0 5642 22 1 1 chr10 23192964 23193909 -117122856 - L1PA3 LINE L1 -244 5911 4967 978 19 0 0 chr10 23193911 23194018 -117122747 - U6 snRNA snRNA 0 107 1 1557 155 19 11 chr10 23194135 23194300 -117122465 - AluJb SINE Alu -10 302 133 2075 126 3 0 chr10 23194300 23194602 -117122163 - AluSx SINE Alu -9 303 1 1557 155 19 11 chr10 23194602 23194707 -117122058 - AluJb SINE Alu -179 133 30 2027 105 3 0 chr10 23194818 23195103 -117121662 - AluSx SINE Alu -4 308 23 401 239 10 166 chr10 23195146 23195192 -117121573 + MER5B DNA MER1_type 1 53 -125 2058 112 7 0 chr10 23195192 23195488 -117121277 - AluSq SINE Alu -11 302 5 401 239 10 166 chr10 23195488 23195499 -117121266 + MER5B DNA MER1_type 53 64 -114 2183 115 3 0 chr10 23195499 23195804 -117120961 - AluSx SINE Alu -6 306 1 401 239 10 166 chr10 23195804 23195887 -117120878 + MER5B DNA MER1_type 64 103 -75 2402 49 3 7 chr10 23195887 23196195 -117120570 - AluY SINE Alu -4 307 1 401 239 10 166 chr10 23196195 23196257 -117120508 + MER5B DNA MER1_type 103 173 -5 1399 148 83 18 chr10 23196682 23196959 -117119806 + AluJo SINE Alu 4 298 -14 232 321 84 46 chr10 23197854 23197985 -117118780 - MER5B DNA MER1_type -2 176 41 2134 115 0 0 chr10 23197991 23198295 -117118470 + AluSx SINE Alu 1 304 -8 2087 100 10 7 chr10 23198295 23198595 -117118170 + AluSx SINE Alu 1 301 -11 1110 148 54 31 chr10 23198605 23198828 -117117937 + L1P5 LINE L1 5571 5798 -358 2271 63 3 3 chr10 23198863 23199162 -117117603 + AluY SINE Alu 10 308 -3 1580 205 42 46 chr10 23199212 23199652 -117117113 - LTR8 LTR ERV1 0 727 293 306 0 0 0 chr10 23199662 23199696 -117117069 + (T)n Simple_repeat Simple_repeat 1 34 0 1156 162 83 42 chr10 23200716 23200956 -117115809 - LTR8 LTR ERV1 -415 276 39 2499 62 0 0 chr10 23200956 23201264 -117115501 - AluY SINE Alu -3 308 1 1156 162 83 42 chr10 23201264 23201292 -117115473 - LTR8 LTR ERV1 -652 39 14 1278 198 50 69 chr10 23201314 23201589 -117115176 - MER4D LTR ERV1 0 903 635 1824 153 0 6 chr10 23201589 23201902 -117114863 - AluJb SINE Alu -1 311 1 1278 198 50 69 chr10 23201902 23201989 -117114776 - MER4D LTR ERV1 -268 635 548 254 276 51 31 chr10 23202323 23202421 -117114344 + MIR SINE MIR 27 126 -136 183 114 0 0 chr10 23202421 23202456 -117114309 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2336 74 3 3 chr10 23202634 23202933 -117113832 + AluSp SINE Alu 1 299 -14 1618 257 124 17 chr10 23203352 23203407 -117113358 - L1M4 LINE L1 -891 5255 5207 1863 147 23 0 chr10 23203407 23203706 -117113059 - AluJo SINE Alu -6 306 1 1618 257 124 17 chr10 23203706 23204304 -117112461 - L1M4 LINE L1 -939 5207 4532 257 155 138 0 chr10 23204344 23204402 -117112363 - L1M4 LINE L1 -1600 4546 4481 940 147 0 0 chr10 23204413 23204563 -117112202 - AluJb SINE Alu -3 309 160 2416 75 3 13 chr10 23204563 23204871 -117111894 - HERVL LTR ERVL -2165 3489 3185 2442 203 60 15 chr10 23204871 23204921 -117111844 - MLT1F1 LTR MaLR -12 555 509 1591 154 95 0 chr10 23204921 23205206 -117111559 - AluJb SINE Alu 0 312 1 2163 125 3 0 chr10 23205206 23205518 -117111247 - AluSq SINE Alu 0 313 1 2442 203 60 15 chr10 23205518 23205997 -117110768 - MLT1F1 LTR MaLR -57 510 1 21 36 0 0 chr10 23206235 23206263 -117110502 + AT_rich Low_complexity Low_complexity 1 28 0 1692 150 0 0 chr10 23206520 23206794 -117109971 - AluSx SINE Alu -6 306 33 319 267 10 30 chr10 23207167 23207201 -117109564 + CT-rich Low_complexity Low_complexity 2 35 -65 2170 91 0 7 chr10 23207201 23207497 -117109268 - AluSg1 SINE Alu -15 294 1 319 267 10 30 chr10 23207497 23207563 -117109202 + CT-rich Low_complexity Low_complexity 35 100 0 704 86 9 0 chr10 23207563 23207668 -117109097 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1658 192 13 0 chr10 23207684 23207992 -117108773 - AluJo SINE Alu 0 312 1 747 65 0 0 chr10 23208002 23208095 -117108670 - AluY SINE Alu -12 299 207 763 135 84 62 chr10 23208198 23208265 -117108500 + L1MA4A LINE L1 6120 6184 -119 2206 121 0 0 chr10 23208265 23208570 -117108195 + AluSx SINE Alu 1 305 -7 763 135 84 62 chr10 23208570 23208680 -117108085 + L1MA4A LINE L1 6184 6301 -2 1419 130 3 144 chr10 23208952 23209124 -117107641 + AluJo SINE Alu 1 100 -212 1931 125 0 7 chr10 23209124 23209434 -117107331 + AluSx SINE Alu 1 308 0 1419 130 3 144 chr10 23209434 23209614 -117107151 + AluJo SINE Alu 100 304 -8 230 253 192 20 chr10 23209762 23209861 -117106904 + MARNA DNA Mariner 75 190 -396 1110 111 29 0 chr10 23209888 23210060 -117106705 - AluSg/x SINE Alu -13 297 121 409 255 38 0 chr10 23210101 23210207 -117106558 - MARNA DNA Mariner -211 375 266 2244 96 0 6 chr10 23210254 23210568 -117106197 - AluSx SINE Alu 0 312 1 2024 123 7 0 chr10 23210574 23210874 -117105891 - AluSx SINE Alu -10 302 1 1429 218 119 13 chr10 23210875 23211260 -117105505 - MER31B LTR ERV1 -40 426 1 2266 84 3 0 chr10 23212039 23212337 -117104428 - AluSp SINE Alu -14 299 1 776 136 0 8 chr10 23213088 23213206 -117103559 - FRAM SINE Alu -8 168 52 586 188 29 12 chr10 23213243 23213413 -117103352 + CT-rich Low_complexity Low_complexity 1 173 0 240 35 0 0 chr10 23213414 23213443 -117103322 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 530 159 0 167 chr10 23213445 23213751 -117103014 - FLAM_C SINE Alu 0 284 2 1192 226 88 38 chr10 23213966 23214380 -117102385 + MLT1C LTR MaLR 17 451 -16 1625 138 96 0 chr10 23214479 23214739 -117102026 - AluSx SINE Alu -27 285 1 1814 163 0 3 chr10 23214741 23215047 -117101718 - AluJo SINE Alu -7 305 1 2291 78 0 0 chr10 23215060 23215355 -117101410 - AluY SINE Alu -16 295 1 1953 168 7 3 chr10 23216265 23216574 -117100191 + AluJb SINE Alu 1 310 -2 438 278 20 20 chr10 23216759 23216893 -117099872 - MIR SINE MIR -12 250 114 2458 70 0 7 chr10 23216893 23217193 -117099572 + AluSq SINE Alu 1 298 -15 438 278 20 20 chr10 23217193 23217209 -117099556 - MIR SINE MIR -147 115 100 1590 174 65 0 chr10 23217244 23217519 -117099246 + AluJb SINE Alu 4 296 -16 280 271 0 0 chr10 23217558 23217628 -117099137 - MIR SINE MIR -141 121 52 1037 152 0 12 chr10 23217737 23217902 -117098863 + FRAM SINE Alu 4 166 0 393 286 76 12 chr10 23218003 23218174 -117098591 + MIR SINE MIR 80 261 -1 2859 102 7 5 chr10 23218561 23218974 -117097791 + L1PA13 LINE L1 5750 6163 0 1209 189 99 0 chr10 23219815 23220048 -117096717 + AluJb SINE Alu 49 304 -8 2195 118 0 16 chr10 23220050 23220365 -117096400 + AluSx SINE Alu 1 310 -2 315 113 0 0 chr10 23221925 23221978 -117094787 + (T)n Simple_repeat Simple_repeat 1 53 0 2152 102 0 0 chr10 23223509 23223783 -117092982 - AluSx SINE Alu -18 294 21 1595 134 5 0 chr10 23224460 23224683 -117092082 + AluSx SINE Alu 1 224 -88 884 141 0 0 chr10 23224683 23224804 -117091961 + AluSp SINE Alu 132 252 -61 438 98 16 0 chr10 23225497 23225558 -117091207 - Alu SINE Alu -248 63 2 413 230 105 63 chr10 23225876 23226067 -117090698 + MER34 LTR ERV1 344 542 0 1038 172 10 5 chr10 23226189 23226381 -117090384 + AluJo SINE Alu 120 312 0 364 289 39 0 chr10 23226404 23226508 -117090257 + MIR SINE MIR 90 197 -65 1424 115 91 12 chr10 23226928 23227181 -117089584 + MER34C LTR ERV1 5 277 -308 1006 214 106 106 chr10 23227245 23227802 -117088963 - LTR1B LTR ERV1 -237 589 33 1671 151 45 10 chr10 23227875 23228167 -117088598 + MER34C LTR ERV1 252 553 -32 228 200 0 0 chr10 23228167 23228202 -117088563 + MER34C LTR ERV1 1 35 -550 * 553 191 182 83 chr10 23228171 23228437 -117088328 + MER39 LTR ERV1 5 487 -220 873 101 7 36 chr10 23228440 23228579 -117088186 - AluSg/x SINE Alu -8 304 170 258 269 68 19 chr10 23229063 23229222 -117087543 - MIR SINE MIR 0 262 95 561 177 11 33 chr10 23229228 23229409 -117087356 + CT-rich Low_complexity Low_complexity 2 178 0 23 0 0 0 chr10 23229742 23229765 -117087000 + AT_rich Low_complexity Low_complexity 1 23 0 791 175 0 7 chr10 23230121 23230258 -117086507 + AluJo SINE Alu 1 136 -176 1917 118 4 15 chr10 23230258 23230530 -117086235 + AluSx SINE Alu 23 291 -21 2309 103 0 0 chr10 23230550 23230860 -117085905 + AluY SINE Alu 1 310 -1 180 277 31 31 chr10 23230953 23231018 -117085747 - MIR3 SINE MIR -31 177 113 1021 231 58 0 chr10 23231293 23231570 -117085195 - MER5C DNA MER1_type -2 322 30 270 308 56 0 chr10 23232129 23232236 -117084529 + MIR SINE MIR 89 201 -61 494 339 41 14 chr10 23232385 23232603 -117084162 + MLT1K LTR MaLR 23 246 -342 1726 151 3 56 chr10 23233095 23233244 -117083521 + AluJb SINE Alu 1 127 -185 2181 127 3 0 chr10 23233244 23233543 -117083222 + AluSq SINE Alu 1 300 -13 1726 151 3 56 chr10 23233543 23233698 -117083067 + AluJb SINE Alu 127 289 -23 2307 103 3 3 chr10 23233990 23234292 -117082473 + AluSq SINE Alu 1 302 -11 427 168 58 152 chr10 23234314 23234505 -117082260 - L1MC5 LINE L1 -60 7901 7729 2208 99 14 0 chr10 23234506 23234824 -117081941 - AluSp SINE Alu 0 324 3 1677 199 3 3 chr10 23234824 23235126 -117081639 - AluJo SINE Alu -10 302 1 32 0 0 0 chr10 23235132 23235164 -117081601 + AT_rich Low_complexity Low_complexity 1 32 0 2414 69 0 0 chr10 23235164 23235453 -117081312 - AluY SINE Alu -22 289 1 2165 114 0 0 chr10 23235464 23235753 -117081012 - AluSq SINE Alu -24 289 1 1065 244 31 39 chr10 23235769 23236183 -117080582 - L1MC5 LINE L1 -240 7721 7311 293 287 69 0 chr10 23237455 23237556 -117079209 + L2 LINE L2 3149 3256 -16 921 206 57 0 chr10 23237853 23238047 -117078718 - MLT1D LTR MaLR 0 505 301 1906 162 3 3 chr10 23238116 23238419 -117078346 + AluSp SINE Alu 1 303 -10 1707 162 19 26 chr10 23238455 23238764 -117078001 + AluJo SINE Alu 1 307 -5 497 273 37 51 chr10 23238841 23239057 -117077708 + MLT1J LTR MaLR 64 276 -235 1144 120 0 0 chr10 23239206 23239387 -117077378 - AluJo/FRAM SINE Alu 0 314 134 2231 116 3 0 chr10 23239387 23239690 -117077075 - AluSq SINE Alu -9 304 1 2069 140 59 6 chr10 23239733 23240089 -117076676 + THE1C LTR MaLR 1 375 0 2023 149 3 0 chr10 23240236 23240532 -117076233 - AluSx SINE Alu -15 297 1 1904 163 0 3 chr10 23240911 23241238 -117075527 + AluSx SINE Alu 1 326 0 338 271 98 0 chr10 23241709 23241831 -117074934 - L2 LINE L2 -1 3271 3138 1399 186 23 107 chr10 23241873 23242266 -117074499 - MLT1A1 LTR MaLR -5 360 1 573 208 21 21 chr10 23242341 23242485 -117074280 - LTR33 LTR ERVL -4 517 374 1714 183 0 25 chr10 23242638 23242955 -117073810 - AluJo SINE Alu -2 310 2 485 296 55 40 chr10 23243071 23243280 -117073485 + MLT1J LTR MaLR 8 184 -262 1660 184 25 3 chr10 23243280 23243562 -117073203 - AluJo SINE Alu -24 288 1 485 296 55 40 chr10 23243562 23243663 -117073102 + MLT1J LTR MaLR 184 282 -164 273 146 49 61 chr10 23243687 23243769 -117072996 + MLT1J1 LTR MaLR 366 446 0 346 211 0 14 chr10 23243885 23243956 -117072809 - AluSg/x SINE Alu -74 226 157 298 274 83 12 chr10 23243999 23244083 -117072682 - AluJo SINE Alu -131 171 82 1134 157 22 63 chr10 23244085 23244308 -117072457 - AluJo SINE Alu -98 214 1 2267 117 0 0 chr10 23244481 23244788 -117071977 - AluSg SINE Alu -3 307 1 2298 92 0 7 chr10 23245021 23245324 -117071441 - AluSp SINE Alu -12 301 1 2053 129 3 19 chr10 23245467 23245776 -117070989 + AluSx SINE Alu 2 305 -7 2609 68 3 0 chr10 23245817 23246126 -117070639 - AluSp SINE Alu -3 310 1 1855 118 53 0 chr10 23246362 23246625 -117070140 - AluSq SINE Alu -14 299 23 2434 72 0 16 chr10 23246815 23247121 -117069644 - AluSp SINE Alu -12 301 1 1423 210 64 62 chr10 23247580 23247905 -117068860 + MER39 LTR ERV1 1 324 -383 2480 81 0 0 chr10 23247905 23248202 -117068563 + AluSg SINE Alu 1 297 -13 1423 210 64 62 chr10 23248202 23248370 -117068395 + MER39 LTR ERV1 324 706 -1 1701 151 8 11 chr10 23248442 23248707 -117068058 - AluSx SINE Alu -17 295 32 853 153 15 0 chr10 23248764 23248895 -117067870 + FLAM_C SINE Alu 1 133 0 26 0 0 27 chr10 23248922 23248946 -117067819 + AT_rich Low_complexity Low_complexity 1 25 -11 2268 103 10 0 chr10 23248946 23249238 -117067527 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr10 23249238 23249250 -117067515 + AT_rich Low_complexity Low_complexity 25 36 0 2824 135 21 9 chr10 23249707 23249810 -117066955 + MER39 LTR ERV1 3 103 -604 3142 191 43 16 chr10 23249810 23250416 -117066349 - LTR26E LTR ERV1 0 622 1 2824 135 21 9 chr10 23250416 23250749 -117066016 + MER39 LTR ERV1 103 444 -263 1345 132 5 9 chr10 23250750 23250962 -117065803 + MER4B LTR ERV1 2 212 -398 2192 119 0 7 chr10 23250990 23251285 -117065480 + AluSx SINE Alu 1 293 -19 1337 216 65 89 chr10 23251285 23251812 -117064953 + LTR9 LTR ERV1 84 597 -15 1915 142 3 7 chr10 23253049 23253351 -117063414 + AluJb SINE Alu 1 301 -11 574 296 33 25 chr10 23253943 23254183 -117062582 - MIR SINE MIR -20 242 1 1099 126 23 11 chr10 23254208 23254382 -117062383 + AluSg/x SINE Alu 118 293 -17 2175 109 3 0 chr10 23254394 23254708 -117062057 + AluSg SINE Alu 1 310 0 820 156 54 0 chr10 23254720 23254887 -117061878 - L1MA8 LINE L1 -12 6279 6104 1047 97 6 68 chr10 23254895 23255071 -117061694 + FAM SINE Alu 1 48 -1 300 68 23 0 chr10 23255076 23255131 -117061634 - L1MA8 LINE L1 -189 6102 6044 329 248 201 7 chr10 23255153 23255302 -117061463 - MER104 DNA Tc2 -1 179 2 1573 188 0 20 chr10 23256090 23256393 -117060372 - AluJo SINE Alu -15 297 1 1903 102 8 4 chr10 23256528 23256784 -117059981 - AluSc SINE Alu -12 297 41 399 133 2 0 chr10 23256784 23256855 -117059910 - AluJo/FLAM SINE Alu -169 133 71 418 342 4 21 chr10 23256952 23257189 -117059576 + L2 LINE L2 2048 2280 -1034 189 333 9 9 chr10 23257455 23257560 -117059205 + L2 LINE L2 2737 2841 -473 2287 117 3 0 chr10 23257629 23257961 -117058804 - AluSx SINE Alu 0 312 1 698 186 0 23 chr10 23258408 23258537 -117058228 - FLAM_A SINE Alu -7 126 1 1490 172 35 21 chr10 23258654 23258939 -117057826 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr10 23258952 23258978 -117057787 + AT_rich Low_complexity Low_complexity 1 26 0 261 149 21 0 chr10 23258978 23259025 -117057740 - MLT1B LTR MaLR -342 48 1 2006 146 0 0 chr10 23259108 23259434 -117057331 - AluSx SINE Alu 0 328 3 637 224 81 6 chr10 23260023 23260197 -117056568 + MIR SINE MIR 3 189 -73 2071 123 12 110 chr10 23260229 23260385 -117056380 + MLT1B LTR MaLR 1 171 -219 2152 119 10 10 chr10 23260385 23260697 -117056068 + AluSx SINE Alu 1 312 0 2071 123 12 110 chr10 23260697 23260969 -117055796 + MLT1B LTR MaLR 171 387 -3 4525 75 17 11 chr10 23261024 23262045 -117054720 - MER11A LTR ERVK 0 1266 1 2210 125 0 0 chr10 23262136 23262431 -117054334 - AluSg SINE Alu -15 295 1 24 32 0 0 chr10 23263630 23263661 -117053104 + AT_rich Low_complexity Low_complexity 1 31 0 2016 137 3 10 chr10 23263869 23264168 -117052597 - AluSx SINE Alu -15 297 1 2084 155 64 50 chr10 23264375 23264719 -117052046 + MSTB LTR MaLR 1 354 -72 2065 125 7 3 chr10 23264719 23265022 -117051743 + AluSx SINE Alu 1 304 -8 2084 155 64 50 chr10 23265022 23265097 -117051668 + MSTB LTR MaLR 354 426 0 549 280 88 53 chr10 23265131 23265575 -117051190 + MLT1J1 LTR MaLR 3 437 -9 1016 180 0 116 chr10 23265958 23266191 -117050574 + AluJo SINE Alu 1 206 -106 270 0 0 0 chr10 23266369 23266399 -117050366 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2093 118 0 4 chr10 23266399 23266679 -117050086 - AluSx SINE Alu -33 279 1 22 41 0 55 chr10 23266828 23266849 -117049916 + AT_rich Low_complexity Low_complexity 1 22 -47 1938 88 0 8 chr10 23266849 23267098 -117049667 - AluSg SINE Alu -26 284 38 22 41 0 55 chr10 23267098 23267115 -117049650 + AT_rich Low_complexity Low_complexity 22 38 -31 949 173 0 24 chr10 23267115 23267283 -117049482 - FAM SINE Alu -11 164 1 22 41 0 55 chr10 23267283 23267316 -117049449 + AT_rich Low_complexity Low_complexity 38 69 0 2424 80 0 0 chr10 23267553 23267864 -117048901 - AluSx SINE Alu -1 311 1 1320 164 66 4 chr10 23268233 23268477 -117048288 + AluJb SINE Alu 1 259 -53 209 33 33 0 chr10 23268503 23268533 -117048232 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1721 157 31 3 chr10 23269291 23269584 -117047181 + AluJo SINE Alu 1 301 -11 2064 112 3 0 chr10 23269586 23269881 -117046884 + AluY SINE Alu 1 296 -15 1889 166 0 0 chr10 23269906 23270208 -117046557 + AluJo SINE Alu 1 302 -10 319 92 0 31 chr10 23270302 23270369 -117046396 - MER39 LTR ERV1 -55 648 487 207 0 0 0 chr10 23270369 23270392 -117046373 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 690 121 0 0 chr10 23270394 23270493 -117046272 - AluY SINE Alu -30 281 183 1342 149 9 9 chr10 23270641 23270863 -117045902 - AluSc SINE Alu -86 223 2 312 143 0 0 chr10 23270865 23270914 -117045851 - MER39 LTR ERV1 -104 603 555 999 146 0 11 chr10 23270915 23271093 -117045672 + AluSg/x SINE Alu 135 310 0 881 291 83 32 chr10 23271093 23271467 -117045298 - MER34 LTR ERV1 -149 393 1 1767 155 7 7 chr10 23271476 23271779 -117044986 - AluJb SINE Alu -9 303 1 28 48 0 0 chr10 23272480 23272522 -117044243 + AT_rich Low_complexity Low_complexity 1 42 0 238 288 0 0 chr10 23272895 23272954 -117043811 - MIR SINE MIR -130 132 74 693 79 30 0 chr10 23273240 23273341 -117043424 - AluSp/q SINE Alu -5 308 205 236 95 0 0 chr10 23273341 23273383 -117043382 + Alu SINE Alu 259 300 0 533 286 40 107 chr10 23273417 23273550 -117043215 - MIR SINE MIR -18 244 104 1371 158 150 4 chr10 23273550 23273797 -117042968 + AluJo SINE Alu 1 283 -19 1035 103 0 27 chr10 23273797 23273982 -117042783 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 533 286 40 107 chr10 23273982 23274099 -117042666 - MIR SINE MIR -156 106 10 773 167 8 8 chr10 23274329 23274461 -117042304 - FLAM_C SINE Alu -1 132 1 32 67 0 0 chr10 23274591 23274651 -117042114 + AT_rich Low_complexity Low_complexity 1 60 0 2056 99 38 0 chr10 23275308 23275600 -117041165 - AluSx SINE Alu -9 303 1 359 176 49 92 chr10 23275885 23275915 -117040850 + L1ME4a LINE L1 5948 5978 -143 1709 167 21 0 chr10 23275915 23276203 -117040562 + AluJo SINE Alu 1 294 -18 359 176 49 92 chr10 23276203 23276314 -117040451 + L1ME4a LINE L1 5978 6083 -38 4751 144 66 4 chr10 23277177 23277955 -117038810 - LTR1B LTR ERV1 0 826 1 647 186 100 26 chr10 23278040 23278239 -117038526 - MLT1G1 LTR MaLR 0 595 325 264 111 0 0 chr10 23278249 23278294 -117038471 + (A)n Simple_repeat Simple_repeat 1 45 0 2276 80 7 0 chr10 23278435 23278734 -117038031 - AluSq SINE Alu -12 301 1 1331 129 36 13 chr10 23278945 23279169 -117037596 + LTR39 LTR ERV1 1 229 -554 2037 123 3 0 chr10 23279169 23279471 -117037294 - AluSx SINE Alu -9 303 1 969 201 63 0 chr10 23279471 23279645 -117037120 + LTR39 LTR ERV1 599 783 0 2177 103 0 7 chr10 23279903 23280213 -117036552 + AluSq SINE Alu 1 308 -5 1989 139 0 3 chr10 23280282 23280583 -117036182 + AluSq SINE Alu 1 300 -13 32 26 0 0 chr10 23280598 23280637 -117036128 + AT_rich Low_complexity Low_complexity 1 39 0 2186 100 0 0 chr10 23282122 23282422 -117034343 + AluSc SINE Alu 1 300 -9 431 178 0 0 chr10 23282643 23282716 -117034049 - MLT1A1 LTR MaLR 0 365 293 2169 103 7 3 chr10 23282733 23283043 -117033722 - AluSx SINE Alu -1 311 1 1431 202 17 10 chr10 23283049 23283341 -117033424 - AluJb SINE Alu -18 294 1 1488 215 6 3 chr10 23283344 23283655 -117033110 - AluJo SINE Alu 0 312 1 1993 140 0 29 chr10 23283655 23283969 -117032796 - MLT1A1 LTR MaLR -60 305 1 982 156 0 23 chr10 23284040 23284213 -117032552 + FRAM SINE Alu 1 168 -8 987 242 139 26 chr10 23284259 23284647 -117032118 - LTR16A LTR ERVL 0 450 19 248 303 90 41 chr10 23285121 23285243 -117031522 + L2 LINE L2 3133 3260 -12 1777 137 113 18 chr10 23285246 23285582 -117031183 + LTR29 LTR ERV1 1 303 -319 1629 246 43 66 chr10 23285582 23286207 -117030558 - LTR9 LTR ERV1 0 612 2 1777 137 113 18 chr10 23286207 23286409 -117030356 + LTR29 LTR ERV1 303 622 0 3766 134 8 31 chr10 23286519 23286835 -117029930 - MER4D LTR ERV1 -9 894 572 2024 87 50 4 chr10 23286835 23287112 -117029653 + AluSg SINE Alu 1 290 -20 3766 134 8 31 chr10 23287112 23287393 -117029372 - MER4D LTR ERV1 -331 572 309 2048 141 3 0 chr10 23287393 23287705 -117029060 + AluSq SINE Alu 1 313 0 3766 134 8 31 chr10 23287705 23287723 -117029042 - MER4D LTR ERV1 -594 309 292 507 265 123 12 chr10 23287730 23287892 -117028873 + LTR1 LTR ERV1 38 217 -568 606 189 32 41 chr10 23287950 23288133 -117028632 + LTR1B LTR ERV1 343 493 -333 285 213 27 153 chr10 23288142 23288292 -117028473 + LTR28 LTR ERV1 848 978 -42 2032 128 10 10 chr10 23288341 23288653 -117028112 - MER4D LTR ERV1 -560 312 1 1419 115 91 12 chr10 23289233 23289486 -117027279 + MER34C LTR ERV1 5 277 -308 1044 212 106 106 chr10 23289550 23290107 -117026658 - LTR1B LTR ERV1 -237 589 33 1659 151 45 10 chr10 23290180 23290472 -117026293 + MER34C LTR ERV1 252 553 -32 227 200 0 0 chr10 23290472 23290507 -117026258 + MER34C LTR ERV1 1 35 -550 * 649 181 181 83 chr10 23290476 23290744 -117026021 + MER39 LTR ERV1 5 489 -218 2240 95 13 0 chr10 23290745 23291049 -117025716 - AluSx SINE Alu -4 308 1 1178 164 9 43 chr10 23291062 23291294 -117025471 + MER87 LTR ERV1 1 224 -317 1710 188 39 36 chr10 23291449 23291492 -117025273 + MER87 LTR ERV1 180 221 -320 1881 128 3 7 chr10 23291492 23291790 -117024975 + AluSp SINE Alu 1 297 -16 1710 188 39 36 chr10 23291790 23291964 -117024801 + MER87 LTR ERV1 221 401 -140 2031 128 3 0 chr10 23291964 23292261 -117024504 - AluSx SINE Alu -14 298 1 1710 188 39 36 chr10 23292261 23292403 -117024362 + MER87 LTR ERV1 401 541 0 3771 169 49 25 chr10 23292419 23293166 -117023599 - LTR1B LTR ERV1 0 785 1 879 151 32 91 chr10 23293166 23293207 -117023558 + MER39 LTR ERV1 502 544 -163 1177 150 6 0 chr10 23293207 23293380 -117023385 + FAM SINE Alu 1 174 -1 879 151 32 91 chr10 23293380 23293448 -117023317 + MER39 LTR ERV1 544 614 -93 1753 118 89 4 chr10 23293448 23293719 -117023046 + AluSq SINE Alu 1 294 -19 879 151 32 91 chr10 23293719 23293827 -117022938 + MER39 LTR ERV1 614 707 0 2071 160 18 18 chr10 23293876 23294109 -117022656 - MER1B DNA MER1_type -2373 339 104 2100 122 34 71 chr10 23294109 23294487 -117022278 - THE1B LTR MaLR 0 364 1 2071 160 18 18 chr10 23294487 23294590 -117022175 - MER1B DNA MER1_type -2607 105 3 1994 138 0 19 chr10 23295157 23295475 -117021290 + AluSx SINE Alu 1 312 0 446 214 79 43 chr10 23295712 23295852 -117020913 - L1ME LINE L1 -616 5505 5361 914 142 25 19 chr10 23296296 23296458 -117020307 - Tigger7 DNA MER2_type 0 2487 2325 1801 95 3 79 chr10 23296476 23296781 -117019984 + AluSx SINE Alu 11 292 -20 3312 21 0 18 chr10 23296881 23297265 -117019500 + SVA Other Other 1010 1386 0 509 212 93 8 chr10 23297459 23297577 -117019188 - FLAM_C SINE Alu -1 132 5 1480 150 43 8 chr10 23297585 23297911 -117018854 - AluJb SINE Alu 0 355 21 4359 103 36 6 chr10 23297934 23298572 -117018193 - MER4D LTR ERV1 -246 657 1 951 114 29 7 chr10 23298578 23298718 -117018047 - MER39 LTR ERV1 -269 438 296 863 250 22 14 chr10 23299151 23299385 -117017380 + LTR48 LTR ERV1 11 214 -430 919 121 0 7 chr10 23299409 23299550 -117017215 + FLAM_C SINE Alu 1 140 -3 1894 175 145 30 chr10 23299552 23300056 -117016709 + LTR48 LTR ERV1 226 787 0 2034 119 3 7 chr10 23300373 23300683 -117016082 + AluSx SINE Alu 1 309 -3 430 198 121 36 chr10 23300688 23300804 -117015961 + MIR SINE MIR 30 154 -62 1806 136 0 29 chr10 23301836 23302145 -117014620 + AluJo SINE Alu 1 300 -12 2890 149 14 93 chr10 23302167 23302792 -117013973 - MER6A DNA MER2_type -260 605 33 2001 127 0 7 chr10 23302792 23303092 -117013673 + AluSq SINE Alu 1 298 -15 2890 149 14 93 chr10 23303092 23303122 -117013643 - MER6A DNA MER2_type -832 33 2 1727 162 7 3 chr10 23303544 23303847 -117012918 - AluJo SINE Alu -8 304 1 1476 154 4 4 chr10 23304082 23304322 -117012443 + AluJo SINE Alu 40 279 -33 333 0 0 0 chr10 23304323 23304360 -117012405 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 550 275 82 0 chr10 23304387 23304558 -117012207 + MIR SINE MIR 12 196 -66 1163 137 75 156 chr10 23304858 23305165 -117011600 - AluJo SINE Alu -18 284 3 1711 119 56 0 chr10 23305176 23305481 -117011284 - AluSx SINE Alu 0 321 2 414 257 166 50 chr10 23305627 23305850 -117010915 - L1MC5 LINE L1 -184 7777 7523 2104 121 0 6 chr10 23305850 23306163 -117010602 - AluSq SINE Alu -2 311 1 414 257 166 50 chr10 23306163 23306180 -117010585 - L1MC5 LINE L1 -438 7523 7509 409 186 153 0 chr10 23306198 23306322 -117010443 + L1ME4a LINE L1 5979 6121 0 1713 167 6 16 chr10 23306339 23306650 -117010115 + AluJb SINE Alu 5 312 0 796 204 0 0 chr10 23306675 23306807 -117009958 + FLAM_A SINE Alu 1 132 -1 2184 99 7 0 chr10 23306942 23307244 -117009521 - AluSq SINE Alu -7 306 3 192 274 0 0 chr10 23307379 23307430 -117009335 + L2 LINE L2 3263 3313 0 494 239 78 14 chr10 23307719 23307747 -117009018 - MER5A DNA MER1_type 0 189 164 1657 162 3 31 chr10 23307747 23308068 -117008697 - AluJo SINE Alu 0 312 1 494 239 78 14 chr10 23308068 23308181 -117008584 - MER5A DNA MER1_type -25 164 39 805 174 8 0 chr10 23308210 23308342 -117008423 + AluJo SINE Alu 2 134 -178 1526 176 28 3 chr10 23308350 23308466 -117008299 + AluJb SINE Alu 1 113 -199 200 86 29 0 chr10 23308466 23308501 -117008264 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1526 176 28 3 chr10 23308501 23308668 -117008097 + AluJb SINE Alu 113 291 -21 330 277 7 123 chr10 23308669 23308824 -117007941 - MER5B DNA MER1_type -30 148 12 1718 75 13 0 chr10 23308831 23309057 -117007708 - L1PA10 LINE L1 -1 6167 5939 302 231 213 9 chr10 23309143 23309251 -117007514 - L1ME4a LINE L1 -1 6120 5991 1713 169 7 10 chr10 23309274 23309569 -117007196 + AluJo SINE Alu 6 299 -13 1641 180 0 27 chr10 23309569 23309708 -117007057 + AluSx SINE Alu 2 143 -169 2091 110 3 0 chr10 23309708 23310000 -117006765 + AluSp SINE Alu 1 293 -20 1641 180 0 27 chr10 23310000 23310154 -117006611 + AluSx SINE Alu 143 287 -25 23 78 0 0 chr10 23310156 23310207 -117006558 + AT_rich Low_complexity Low_complexity 1 51 0 809 140 0 0 chr10 23310250 23310364 -117006401 + FLAM_C SINE Alu 11 124 -19 2591 146 21 5 chr10 23310388 23310807 -117005958 + MSTA LTR MaLR 3 428 0 1167 181 0 0 chr10 23311817 23312016 -117004749 + AluJb SINE Alu 86 284 -28 2005 118 0 7 chr10 23312034 23312366 -117004399 - AluSx SINE Alu 0 330 1 294 259 62 0 chr10 23312510 23312591 -117004174 - L2 LINE L2 -1 3312 3227 550 280 50 61 chr10 23312619 23312752 -117004013 + Charlie8 DNA MER1_type 1 131 -210 2168 97 3 0 chr10 23312752 23313051 -117003714 + AluSg SINE Alu 2 301 -9 550 280 50 61 chr10 23313051 23313178 -117003587 + Charlie8 DNA MER1_type 131 258 -83 182 306 199 88 chr10 23313414 23313630 -117003135 - MIR SINE MIR 0 262 23 183 156 0 0 chr10 23314377 23314409 -117002356 + (TA)n Simple_repeat Simple_repeat 2 33 0 210 222 0 22 chr10 23314519 23314564 -117002201 + MIR SINE MIR 97 140 -68 1963 164 0 0 chr10 23314574 23314886 -117001879 + AluJb SINE Alu 1 312 0 2080 105 7 3 chr10 23314886 23315191 -117001574 + AluSc SINE Alu 1 306 -3 480 315 63 57 chr10 23315488 23315934 -117000831 + L1MEd LINE L1 323 774 -5345 2310 81 3 0 chr10 23315934 23316232 -117000533 + AluSp SINE Alu 2 300 -13 480 315 63 57 chr10 23316232 23316344 -117000421 + L1MEd LINE L1 774 884 -5235 537 260 55 0 chr10 23316369 23316496 -117000269 - L2 LINE L2 -19 3294 3161 24 67 0 0 chr10 23316589 23316634 -117000131 + AT_rich Low_complexity Low_complexity 1 45 0 2045 104 3 10 chr10 23317076 23317374 -116999391 - AluSc SINE Alu -13 296 1 2027 110 0 26 chr10 23317374 23317682 -116999083 - AluSx SINE Alu -12 300 1 852 79 0 9 chr10 23317682 23317796 -116998969 - MER41B LTR ERV1 -477 158 46 2045 104 3 10 chr10 23318579 23318877 -116997888 - AluSc SINE Alu -13 296 1 2027 110 0 26 chr10 23318877 23319185 -116997580 - AluSx SINE Alu -12 300 1 852 79 0 9 chr10 23319185 23319299 -116997466 - MER41A LTR ERV1 -396 158 46 2056 121 0 0 chr10 23319546 23319853 -116996912 + AluSx SINE Alu 1 307 -5 2048 106 0 39 chr10 23320450 23320761 -116996004 - AluSg1 SINE Alu -8 301 3 22 0 0 0 chr10 23320767 23320789 -116995976 + AT_rich Low_complexity Low_complexity 1 22 0 280 260 125 0 chr10 23320822 23320918 -116995847 - L2 LINE L2 0 3313 3206 22 0 0 0 chr10 23321309 23321331 -116995434 + AT_rich Low_complexity Low_complexity 1 22 0 1695 160 11 3 chr10 23321364 23321651 -116995114 + AluSx SINE Alu 1 289 -23 1834 154 7 0 chr10 23322887 23323180 -116993585 - AluJb SINE Alu -17 295 1 1519 197 20 0 chr10 23323843 23324148 -116992617 - AluJo SINE Alu -1 311 1 316 218 23 11 chr10 23324216 23324303 -116992462 - LTR33 LTR ERVL -3 518 431 1852 177 2 104 chr10 23324303 23324594 -116992171 - MLT1B LTR MaLR 0 390 156 981 193 0 0 chr10 23324594 23324755 -116992010 - FRAM SINE Alu -5 161 1 1852 177 2 104 chr10 23324755 23324897 -116991868 - MLT1B LTR MaLR -234 156 1 1987 125 7 0 chr10 23324897 23325200 -116991565 + AluSx SINE Alu 1 305 -7 371 295 9 0 chr10 23325201 23325306 -116991459 - LTR33 LTR ERVL -85 436 331 601 172 52 0 chr10 23325328 23325444 -116991321 + FRAM SINE Alu 55 176 0 1988 107 41 0 chr10 23325447 23325738 -116991027 + AluSg SINE Alu 1 303 -7 2179 122 3 0 chr10 23326569 23326880 -116989885 + AluSx SINE Alu 1 312 0 2206 77 0 3 chr10 23326992 23327277 -116989488 + AluSc SINE Alu 10 293 -16 826 153 0 8 chr10 23327465 23327596 -116989169 + FLAM_C SINE Alu 1 130 -3 2206 81 0 3 chr10 23327661 23327958 -116988807 - AluY SINE Alu -10 301 6 282 29 0 0 chr10 23327974 23328009 -116988756 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2213 71 0 4 chr10 23328012 23328293 -116988472 - AluSq SINE Alu -33 280 1 1978 129 0 3 chr10 23328303 23328624 -116988141 - AluSx SINE Alu 0 320 1 274 197 0 0 chr10 23328961 23329022 -116987743 + L1MB4 LINE L1 6120 6180 0 2289 93 0 0 chr10 23329383 23329694 -116987071 + AluY SINE Alu 1 311 0 2336 90 0 0 chr10 23329712 23330011 -116986754 + AluSg SINE Alu 1 299 -11 1816 147 3 17 chr10 23330015 23330314 -116986451 + AluSx SINE Alu 1 295 -17 372 333 38 0 chr10 23330383 23330515 -116986250 - L2 LINE L2 -2 3270 3134 2172 84 0 23 chr10 23330659 23330968 -116985797 - AluSc SINE Alu -7 302 1 1980 136 0 16 chr10 23331527 23331836 -116984929 + AluSx SINE Alu 1 304 -8 995 158 0 0 chr10 23332049 23332214 -116984551 + AluSg/x SINE Alu 137 301 -11 225 167 0 0 chr10 23332423 23332459 -116984306 + AluSx SINE Alu 1 36 -266 1921 106 0 64 chr10 23332459 23332770 -116983995 + AluSg SINE Alu 8 298 -12 1000 113 0 108 chr10 23332789 23332974 -116983791 + AluJb SINE Alu 136 300 -12 249 291 64 55 chr10 23332981 23333091 -116983674 + L1MC4a LINE L1 5541 5651 -511 403 249 28 68 chr10 23333135 23333312 -116983453 + L1MC4a LINE L1 5764 5933 -1875 2024 125 0 0 chr10 23333408 23333704 -116983061 + AluSx SINE Alu 12 307 -5 650 240 0 0 chr10 23333843 23333972 -116982793 + FLAM_A SINE Alu 1 129 -4 1543 97 0 0 chr10 23334009 23334216 -116982549 + AluSc SINE Alu 82 288 -21 2366 64 0 0 chr10 23334236 23334534 -116982231 + AluY SINE Alu 1 298 -13 593 146 0 0 chr10 23334579 23334668 -116982097 - AluSg/x SINE Alu -21 289 201 1629 186 3 7 chr10 23335278 23335573 -116981192 + AluJo SINE Alu 1 294 -18 1913 142 0 26 chr10 23335943 23336253 -116980512 + AluSx SINE Alu 1 302 -10 1600 115 0 0 chr10 23336379 23336605 -116980160 - AluSg/x SINE Alu -4 305 80 1824 126 19 0 chr10 23336700 23336969 -116979796 + AluSx SINE Alu 23 296 -16 2285 164 28 39 chr10 23337218 23337611 -116979154 + MSTA LTR MaLR 1 390 -38 1986 120 27 0 chr10 23337611 23337910 -116978855 - AluSx SINE Alu -4 308 2 2285 164 28 39 chr10 23337910 23337949 -116978816 + MSTA LTR MaLR 390 428 0 1867 128 12 40 chr10 23338141 23338462 -116978303 - AluSx SINE Alu 0 312 1 180 111 0 0 chr10 23338471 23338498 -116978267 + (TA)n Simple_repeat Simple_repeat 1 27 0 1814 136 10 10 chr10 23338498 23338783 -116977982 - AluSx SINE Alu -24 288 1 2077 132 0 3 chr10 23338795 23339106 -116977659 - AluSg SINE Alu 0 310 1 1797 169 0 0 chr10 23339171 23339472 -116977293 - AluJb SINE Alu -11 301 1 4963 160 34 21 chr10 23339472 23340143 -116976622 + Charlie1 DNA MER1_type 1780 2469 -292 2421 77 3 0 chr10 23340143 23340454 -116976311 - AluSp SINE Alu -1 312 1 4963 160 34 21 chr10 23340454 23340751 -116976014 + Charlie1 DNA MER1_type 2469 2761 0 2241 94 3 0 chr10 23341421 23341719 -116975046 + AluSg SINE Alu 1 299 -11 850 159 0 0 chr10 23341879 23342011 -116974754 + FLAM_C SINE Alu 1 132 -1 30 0 0 0 chr10 23342159 23342189 -116974576 + AT_rich Low_complexity Low_complexity 1 30 0 1180 111 28 0 chr10 23342225 23342405 -116974360 - AluSx SINE Alu -1 309 125 847 123 46 0 chr10 23342508 23342638 -116974127 - AluSx SINE Alu -177 136 1 596 203 36 7 chr10 23342647 23342785 -116973980 - MLT1J2 LTR MaLR -308 142 1 2001 95 0 0 chr10 23342821 23343085 -116973680 + AluSx SINE Alu 1 264 -48 399 322 21 73 chr10 23343107 23343340 -116973425 - L2 LINE L2 -432 2882 2662 742 167 7 43 chr10 23343340 23343478 -116973287 + FLAM_C SINE Alu 1 133 0 2215 96 0 0 chr10 23343553 23343846 -116972919 - AluSg SINE Alu -17 293 1 187 340 124 10 chr10 23343864 23344058 -116972707 - L2 LINE L2 -952 2362 2147 447 283 9 0 chr10 23344133 23344239 -116972526 + MER63A DNA MER1_type 104 210 0 2223 63 7 10 chr10 23344298 23344598 -116972167 + AluY SINE Alu 6 304 -7 1190 108 0 0 chr10 23344598 23344764 -116972001 + AluSg/x SINE Alu 134 299 -13 248 352 11 80 chr10 23344846 23344908 -116971857 - L2 LINE L2 -1357 1957 1892 1618 144 10 40 chr10 23344908 23345206 -116971559 - AluJb SINE Alu -14 298 10 248 352 11 80 chr10 23345206 23345319 -116971446 - L2 LINE L2 -1422 1892 1794 382 169 56 0 chr10 23345319 23345408 -116971357 + AluJ/FLAM SINE Alu 2 95 -207 23 33 0 0 chr10 23345531 23345561 -116971204 + AT_rich Low_complexity Low_complexity 1 30 0 961 169 0 6 chr10 23345596 23345762 -116971003 + AluSg/x SINE Alu 124 288 -22 324 227 0 0 chr10 23345763 23345829 -116970936 + U3 snRNA snRNA 1 66 -151 846 154 0 0 chr10 23345897 23346020 -116970745 - FLAM_A SINE Alu -10 123 1 1515 155 15 8 chr10 23346161 23346426 -116970339 + AluJb SINE Alu 38 304 -8 518 322 109 22 chr10 23346454 23346721 -116970044 + L2 LINE L2 3016 3305 -8 2090 123 7 0 chr10 23346735 23347044 -116969721 + AluSx SINE Alu 1 311 -1 2060 101 31 0 chr10 23347168 23347456 -116969309 - AluSq SINE Alu -15 298 2 1741 119 20 0 chr10 23347505 23347757 -116969008 - AluSx SINE Alu -55 257 1 986 207 267 26 chr10 23347797 23348213 -116968552 - MLT1H LTR MaLR -9 540 25 1305 219 9 88 chr10 23348329 23348657 -116968108 + AluJo SINE Alu 1 302 0 1435 148 3 77 chr10 23349252 23349563 -116967202 - AluJb SINE Alu -14 298 11 23 0 0 0 chr10 23349990 23350013 -116966752 + AT_rich Low_complexity Low_complexity 1 23 0 838 163 0 14 chr10 23350076 23350217 -116966548 - FRAM SINE Alu -18 158 20 21 0 0 0 chr10 23351227 23351248 -116965517 + AT_rich Low_complexity Low_complexity 1 21 0 2181 101 0 7 chr10 23352062 23352360 -116964405 + AluSg SINE Alu 1 296 -14 22 35 0 0 chr10 23353106 23353135 -116963630 + AT_rich Low_complexity Low_complexity 1 29 0 2061 110 7 13 chr10 23353825 23354135 -116962630 + AluSg SINE Alu 1 308 -2 301 241 0 25 chr10 23362405 23362484 -116954281 + GA-rich Low_complexity Low_complexity 3 79 0 2250 83 3 10 chr10 23365431 23365745 -116951020 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 23366387 23366415 -116950350 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 23367413 23367437 -116949328 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 183 228 140 18 chr10 23368139 23368196 -116948569 - L2 LINE L2 0 3272 3209 441 0 0 0 chr10 23369304 23369353 -116947412 + (TG)n Simple_repeat Simple_repeat 2 50 0 211 213 27 0 chr10 23369354 23369429 -116947336 + GA-rich Low_complexity Low_complexity 2 78 0 26 50 0 0 chr10 23370734 23370774 -116945991 + GC_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr10 23371224 23371274 -116945491 + GC_rich Low_complexity Low_complexity 1 50 0 279 0 0 0 chr10 23371535 23371566 -116945199 + (T)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 23371946 23371970 -116944795 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 23372385 23372406 -116944359 + AT_rich Low_complexity Low_complexity 1 21 0 2340 78 7 0 chr10 23374716 23375022 -116941743 + AluSx SINE Alu 3 310 -2 390 91 0 0 chr10 23377316 23377371 -116939394 + (TCC)n Simple_repeat Simple_repeat 2 56 0 393 22 0 0 chr10 23377550 23377596 -116939169 + (TGG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr10 23382507 23382529 -116934236 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 23384780 23384811 -116931954 + GC_rich Low_complexity Low_complexity 1 31 0 208 121 0 0 chr10 23384835 23384868 -116931897 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 37 0 0 0 chr10 23385889 23385926 -116930839 + GC_rich Low_complexity Low_complexity 1 37 0 274 189 19 0 chr10 23389160 23389213 -116927552 - L2 LINE L2 -7 3265 3212 315 0 0 0 chr10 23390515 23390550 -116926215 + (TA)n Simple_repeat Simple_repeat 1 35 0 353 296 12 0 chr10 23390573 23390654 -116926111 + L2 LINE L2 3230 3311 -2 24 0 0 0 chr10 23391383 23391407 -116925358 + AT_rich Low_complexity Low_complexity 1 24 0 1559 199 3 3 chr10 23391633 23391924 -116924841 - AluJb SINE Alu -21 291 1 22 0 0 0 chr10 23392051 23392073 -116924692 + AT_rich Low_complexity Low_complexity 1 22 0 645 173 73 0 chr10 23392077 23392187 -116924578 + FLAM_C SINE Alu 1 118 -15 2204 96 0 10 chr10 23392201 23392513 -116924252 + AluY SINE Alu 1 309 -2 814 164 0 23 chr10 23392513 23392641 -116924124 - AluJo/FLAM SINE Alu -177 125 1 1796 131 0 0 chr10 23392968 23393228 -116923537 + AluSq SINE Alu 1 260 -53 200 33 0 33 chr10 23393237 23393267 -116923498 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1999 126 14 0 chr10 23393318 23393612 -116923153 + AluSx SINE Alu 1 298 -14 3032 145 32 21 chr10 23393613 23394177 -116922588 + L1MB3 LINE L1 5604 6173 -10 1912 129 0 14 chr10 23394178 23394472 -116922293 - AluSx SINE Alu -22 290 1 32 43 0 0 chr10 23394530 23394576 -116922189 + AT_rich Low_complexity Low_complexity 1 46 0 2113 101 24 7 chr10 23394705 23395001 -116921764 - AluSq SINE Alu -12 301 1 805 270 69 13 chr10 23395092 23395325 -116921440 + MLT2E LTR ERVL 8 253 -375 633 272 13 64 chr10 23395366 23395511 -116921254 + MLT2E LTR ERVL 338 468 -160 1629 167 7 17 chr10 23395511 23395811 -116920954 - AluJo SINE Alu -13 299 3 633 272 13 64 chr10 23395811 23395900 -116920865 + MLT2E LTR ERVL 468 560 -68 841 189 6 24 chr10 23395915 23396084 -116920681 - AluJo SINE Alu -74 238 73 1507 173 69 7 chr10 23396713 23397002 -116919763 + AluJb SINE Alu 5 311 -1 2048 115 3 7 chr10 23397010 23397314 -116919451 + AluSg1 SINE Alu 1 303 -6 685 229 0 0 chr10 23397578 23397709 -116919056 + AluJo/FLAM SINE Alu 1 131 -171 2092 144 0 0 chr10 23397712 23398024 -116918741 + AluSq SINE Alu 2 313 0 1648 160 7 14 chr10 23398037 23398319 -116918446 + AluJb SINE Alu 1 280 -32 759 91 0 0 chr10 23398347 23398446 -116918319 + HY3 scRNA scRNA 1 99 -2 1973 119 6 13 chr10 23399447 23399758 -116917007 - AluSx SINE Alu -3 309 1 1400 175 27 38 chr10 23400103 23400307 -116916458 - AluJb SINE Alu -23 289 87 2014 111 3 13 chr10 23400307 23400605 -116916160 - AluSp SINE Alu -18 295 1 1400 175 27 38 chr10 23400605 23400692 -116916073 - AluJb SINE Alu -225 87 1 1078 138 6 0 chr10 23400807 23400981 -116915784 - AluSg/x SINE Alu -4 308 134 2137 102 0 13 chr10 23400981 23401286 -116915479 - AluSq SINE Alu -12 301 1 1493 168 45 41 chr10 23401525 23401672 -116915093 - AluJb SINE Alu -19 293 148 2233 91 7 10 chr10 23401672 23401980 -116914785 - AluSp SINE Alu -6 307 1 1493 168 45 41 chr10 23401980 23402124 -116914641 - AluJb SINE Alu -164 148 1 180 0 0 0 chr10 23402930 23402950 -116913815 + (T)n Simple_repeat Simple_repeat 1 20 0 1982 122 17 0 chr10 23403010 23403305 -116913460 + AluSq SINE Alu 2 301 -12 1146 119 28 0 chr10 23403306 23403483 -116913282 + AluSg/x SINE Alu 124 305 -5 1458 135 82 50 chr10 23403490 23403626 -116913139 + AluJb SINE Alu 1 131 -181 1747 148 13 17 chr10 23403626 23403924 -116912841 + AluSx SINE Alu 1 297 -15 1458 135 82 50 chr10 23403924 23404068 -116912697 + AluJb SINE Alu 131 290 -22 26 50 0 0 chr10 23404197 23404237 -116912528 + AT_rich Low_complexity Low_complexity 1 40 0 1683 167 3 3 chr10 23404395 23404694 -116912071 + AluSx SINE Alu 1 299 -13 1442 168 21 10 chr10 23404744 23404906 -116911859 - AluJo SINE Alu -18 294 126 2048 114 7 0 chr10 23404906 23405204 -116911561 - AluSx SINE Alu -12 300 1 1442 168 21 10 chr10 23405204 23405332 -116911433 - AluJo SINE Alu -186 126 1 1980 118 7 3 chr10 23405805 23406094 -116910671 + AluSq SINE Alu 1 290 -23 1227 213 17 50 chr10 23406113 23406414 -116910351 + AluJo SINE Alu 2 292 -20 1146 93 43 0 chr10 23406474 23406636 -116910129 - AluSg/x SINE Alu -9 301 133 2159 116 0 0 chr10 23406637 23406939 -116909826 - AluSp SINE Alu -11 302 1 32 0 0 0 chr10 23406972 23407004 -116909761 + AT_rich Low_complexity Low_complexity 1 32 0 2010 120 0 3 chr10 23407005 23407297 -116909468 - AluSp SINE Alu -22 291 1 382 298 61 8 chr10 23407521 23407652 -116909113 - MIR SINE MIR -3 259 122 2223 88 3 0 chr10 23408382 23408676 -116908089 + AluSp SINE Alu 1 295 -18 1483 201 7 0 chr10 23409201 23409485 -116907280 - AluJo SINE Alu -26 286 1 26 0 0 0 chr10 23409582 23409608 -116907157 + AT_rich Low_complexity Low_complexity 1 26 0 1710 163 7 3 chr10 23409608 23409897 -116906868 - AluSx SINE Alu -22 290 1 1184 94 0 39 chr10 23409929 23410090 -116906675 - AluSg/x SINE Alu -18 294 139 1972 100 13 48 chr10 23410090 23410253 -116906512 - AluSx SINE Alu -12 300 152 2019 101 28 0 chr10 23410253 23410541 -116906224 - AluSp SINE Alu -17 296 1 1972 100 13 48 chr10 23410541 23410688 -116906077 - AluSx SINE Alu -160 152 1 1184 94 0 39 chr10 23410688 23410707 -116906058 - AluSg/x SINE Alu -173 139 121 705 150 9 0 chr10 23410917 23411030 -116905735 - FLAM_A SINE Alu -5 137 24 1835 121 6 58 chr10 23411038 23411351 -116905414 - AluSx SINE Alu -9 303 7 391 286 172 67 chr10 23411354 23411697 -116905068 - L1MEc LINE L1 -4515 1795 1417 288 280 86 31 chr10 23411698 23411881 -116904884 - L1MEc LINE L1 -4862 1257 1055 2074 118 13 0 chr10 23411881 23412187 -116904578 - AluY SINE Alu -1 310 1 288 280 86 31 chr10 23412187 23412260 -116904505 - L1MEc LINE L1 -5064 1055 987 1850 104 45 7 chr10 23412641 23412928 -116903837 - AluSg SINE Alu -12 298 1 1832 100 86 4 chr10 23413178 23413457 -116903308 - AluSx SINE Alu -10 302 1 1785 158 3 3 chr10 23414053 23414350 -116902415 - AluSx SINE Alu -15 297 1 2137 86 22 32 chr10 23414430 23414743 -116902022 - AluSg SINE Alu 0 310 1 243 0 0 0 chr10 23414808 23414835 -116901930 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 23415273 23415294 -116901471 + AT_rich Low_complexity Low_complexity 1 21 0 1726 157 11 0 chr10 23415303 23415589 -116901176 - AluSx SINE Alu -2 310 22 851 172 7 0 chr10 23415591 23415742 -116901023 - AluJo SINE Alu -158 154 3 2248 99 0 3 chr10 23415907 23416210 -116900555 - AluSq SINE Alu -11 302 1 199 140 0 53 chr10 23416270 23416327 -116900438 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 285 261 34 34 chr10 23416331 23416450 -116900315 + CT-rich Low_complexity Low_complexity 3 121 0 1546 229 114 73 chr10 23416464 23416844 -116899921 - HAL1 LINE L1 -606 1901 1538 1946 140 3 3 chr10 23416844 23417144 -116899621 - AluSx SINE Alu -12 300 1 1546 229 114 73 chr10 23417144 23417158 -116899607 - HAL1 LINE L1 -969 1538 1526 2143 126 7 0 chr10 23417158 23417468 -116899297 - AluSx SINE Alu 0 312 1 1546 229 114 73 chr10 23417468 23417837 -116898928 - HAL1 LINE L1 -981 1526 1106 269 205 116 4 chr10 23417889 23417958 -116898807 - AluJ/FLAM SINE Alu -236 66 1 2039 95 3 33 chr10 23417972 23418277 -116898488 - AluSc SINE Alu -13 296 1 2114 107 7 0 chr10 23418327 23418637 -116898128 - AluSq SINE Alu -1 312 1 248 278 120 73 chr10 23418641 23418718 -116898047 - HAL1 LINE L1 -1429 1078 1006 209 56 0 28 chr10 23418718 23418754 -116898011 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1873 133 3 0 chr10 23418754 23419039 -116897726 - AluSx SINE Alu -26 286 1 248 278 120 73 chr10 23419039 23419192 -116897573 - HAL1 LINE L1 -1501 1006 862 1823 108 36 46 chr10 23419192 23419497 -116897268 - AluSp SINE Alu -11 302 1 2093 92 46 0 chr10 23419498 23419779 -116896986 - AluSx SINE Alu -18 294 1 248 278 120 73 chr10 23419779 23419886 -116896879 - HAL1 LINE L1 -1644 863 721 286 260 96 110 chr10 23420014 23420379 -116896386 - HAL1 LINE L1 -1995 512 153 414 251 262 55 chr10 23421082 23421429 -116895336 - MLT1K LTR MaLR -167 421 3 2336 99 3 3 chr10 23421454 23421767 -116894998 - AluSq SINE Alu 0 313 1 534 141 10 61 chr10 23421896 23421995 -116894770 + FRAM SINE Alu 77 170 -6 828 138 0 66 chr10 23422049 23422201 -116894564 - FLAM_C SINE Alu 0 143 2 28 0 0 0 chr10 23422209 23422237 -116894528 + AT_rich Low_complexity Low_complexity 1 28 0 385 243 86 111 chr10 23422283 23422603 -116894162 - L1M4 LINE L1 -1273 4873 4563 2096 121 14 0 chr10 23422603 23422893 -116893872 - AluSg SINE Alu -15 295 2 385 243 86 111 chr10 23422893 23422967 -116893798 - L1M4 LINE L1 -1583 4563 4489 3757 184 42 65 chr10 23422971 23423527 -116893238 - L1MB4 LINE L1 -3 6177 5610 2183 80 28 3 chr10 23423527 23423815 -116892950 - AluSp SINE Alu -18 295 1 3757 184 42 65 chr10 23423815 23423946 -116892819 - L1MB4 LINE L1 -570 5610 5478 1296 236 51 20 chr10 23423946 23424101 -116892664 - AluJo SINE Alu 0 302 153 222 37 0 0 chr10 23424101 23424128 -116892637 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1296 236 51 20 chr10 23424128 23424265 -116892500 - AluJo SINE Alu -149 153 1 3757 184 42 65 chr10 23424265 23424754 -116892011 - L1MB4 LINE L1 -702 5478 4979 2020 102 0 48 chr10 23424754 23425075 -116891690 - AluSg SINE Alu 0 307 1 3757 184 42 65 chr10 23425075 23425328 -116891437 - L1MB4 LINE L1 -1201 4979 4722 2264 109 0 0 chr10 23425328 23425621 -116891144 - AluSp SINE Alu -19 294 2 3757 184 42 65 chr10 23425621 23425842 -116890923 - L1MB4 LINE L1 -1458 4722 4583 2381 109 0 0 chr10 23425842 23426153 -116890612 - AluSq SINE Alu -1 312 2 3757 184 42 65 chr10 23426153 23426296 -116890469 - L1MB4 LINE L1 -1597 4583 4438 1940 81 12 0 chr10 23426326 23426573 -116890192 - AluSp SINE Alu -1 312 63 281 95 0 0 chr10 23426573 23426615 -116890150 - L1M4c LINE L1 -6326 58 17 * 1125 206 124 57 chr10 23426614 23426759 -116890006 - L1MD1 LINE L1 -197 6045 5911 2013 133 7 0 chr10 23426759 23427053 -116889712 + AluSx SINE Alu 1 296 -16 1125 206 124 57 chr10 23427053 23427306 -116889459 - L1MD1 LINE L1 -331 5911 5433 2296 78 0 0 chr10 23427308 23427628 -116889137 - AluY SINE Alu 0 320 1 1057 178 138 40 chr10 23427639 23427886 -116888879 - AluJo SINE Alu -21 291 21 426 156 3 46 chr10 23427899 23427990 -116888775 - L1MD1 LINE L1 -802 5440 5362 659 183 0 0 chr10 23427990 23428094 -116888671 - U6 snRNA snRNA -3 104 1 426 156 3 46 chr10 23428094 23428139 -116888626 - L1MD1 LINE L1 -880 5362 5317 1544 82 0 10 chr10 23428163 23428357 -116888408 + AluSp SINE Alu 108 299 -14 1144 212 79 80 chr10 23428358 23428817 -116887948 - L1MDa LINE L1 -3464 3076 2618 2055 137 0 3 chr10 23428817 23429123 -116887642 - AluSg SINE Alu -5 305 1 1793 181 0 0 chr10 23429123 23429422 -116887343 - AluJo SINE Alu -13 299 1 1144 212 79 80 chr10 23429422 23429462 -116887303 - L1MDa LINE L1 -3921 2619 2580 1914 146 10 16 chr10 23429462 23429771 -116886994 - AluSx SINE Alu -5 307 1 1144 212 79 80 chr10 23429771 23429853 -116886912 - L1MDa LINE L1 -3960 2580 2499 1940 147 14 0 chr10 23429853 23430139 -116886626 - AluSq SINE Alu -18 295 6 1144 212 79 80 chr10 23430139 23430216 -116886549 - L1MDa LINE L1 -4041 2499 2404 2378 86 3 0 chr10 23430328 23430629 -116886136 - AluSp SINE Alu -11 302 1 2608 268 52 38 chr10 23430637 23431332 -116885433 - L1MDa LINE L1 -5452 1088 288 2255 96 7 0 chr10 23431332 23431634 -116885131 - AluSx SINE Alu -8 304 1 2608 268 52 38 chr10 23431634 23431926 -116884839 - L1MDa LINE L1 -6252 288 2 1021 225 205 10 chr10 23431917 23432108 -116884657 - L1MEc LINE L1 -2958 3257 3105 * 1882 123 7 32 chr10 23432108 23432451 -116884314 - AluSg1 SINE Alu 0 309 1 1021 225 205 10 chr10 23432451 23432771 -116883994 - L1MEc LINE L1 -3110 3105 2634 818 175 12 31 chr10 23432782 23432942 -116883823 - AluJo/FRAM SINE Alu -22 290 134 2296 92 7 0 chr10 23432942 23433237 -116883528 - AluSx SINE Alu -15 297 1 1283 155 97 54 chr10 23433261 23433414 -116883351 - AluJb SINE Alu -22 290 145 2214 122 3 0 chr10 23433414 23433725 -116883040 - AluSp SINE Alu -1 312 1 306 73 0 0 chr10 23433729 23433770 -116882995 + (TG)n Simple_repeat Simple_repeat 2 42 0 1283 155 97 54 chr10 23433770 23433889 -116882876 - AluJb SINE Alu -169 143 1 2381 264 60 37 chr10 23434146 23435203 -116881562 - L1MEc LINE L1 -5308 1088 8 3190 222 131 98 chr10 23435213 23436133 -116880632 - L1MEc LINE L1 -743 5472 4584 1890 146 37 3 chr10 23436133 23436427 -116880338 - AluSx SINE Alu -8 304 1 3190 222 131 98 chr10 23436427 23436805 -116879960 - L1MEc LINE L1 -1631 4584 4220 690 223 7 14 chr10 23436805 23436944 -116879821 - MER74A LTR ERVL 0 558 421 3190 222 131 98 chr10 23436944 23437134 -116879631 - L1MEc LINE L1 -1995 4220 4038 1501 118 49 37 chr10 23437134 23437380 -116879385 - AluSx SINE Alu -63 249 1 3190 222 131 98 chr10 23437380 23437923 -116878842 - L1MEc LINE L1 -2177 4038 3514 4495 117 13 11 chr10 23437923 23438557 -116878208 - MER41B LTR ERV1 0 635 1 3190 222 131 98 chr10 23438557 23438695 -116878070 - L1MEc LINE L1 -2701 3514 3382 297 0 0 0 chr10 23438695 23438728 -116878037 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1852 154 0 18 chr10 23438728 23439013 -116877752 - AluSx SINE Alu -32 280 1 3190 222 131 98 chr10 23439013 23439407 -116877358 - L1MEc LINE L1 -2832 3383 2445 1855 157 0 37 chr10 23439424 23439748 -116877017 - AluSx SINE Alu 0 312 1 2355 68 10 0 chr10 23439759 23440055 -116876710 - AluY SINE Alu -12 299 1 272 233 105 0 chr10 23440057 23440143 -116876622 - L1MEc LINE L1 -4004 2392 2298 2367 97 0 0 chr10 23440148 23440447 -116876318 - AluSp SINE Alu -14 299 1 3223 202 71 27 chr10 23440474 23440978 -116875787 - L1MB7 LINE L1 -106 6078 5597 2147 110 3 29 chr10 23440978 23441287 -116875478 - AluSx SINE Alu -11 301 1 3223 202 71 27 chr10 23441287 23441395 -116875370 - L1MB7 LINE L1 -587 5597 5495 2067 130 3 16 chr10 23441395 23441711 -116875054 - AluSx SINE Alu 0 312 1 3223 202 71 27 chr10 23441711 23442192 -116874573 - L1MB7 LINE L1 -689 5495 4936 1352 278 95 52 chr10 23442260 23443079 -116873686 - L1MEc LINE L1 -4382 2014 1145 2320 93 3 3 chr10 23443079 23443379 -116873386 - AluSp SINE Alu -13 300 1 1352 278 95 52 chr10 23443379 23443523 -116873242 - L1MEc LINE L1 -5251 1145 1009 906 186 11 11 chr10 23443523 23443700 -116873065 - FRAM SINE Alu 0 176 1 2351 83 0 7 chr10 23443906 23444206 -116872559 - AluY SINE Alu -13 298 1 1985 138 0 39 chr10 23444217 23444528 -116872237 - AluSg SINE Alu -11 299 1 2420 70 3 7 chr10 23444561 23444862 -116871903 - AluY SINE Alu -11 300 1 1895 113 39 53 chr10 23444873 23445042 -116871723 - MER7C DNA MER2_type -2665 363 200 1826 157 78 28 chr10 23445042 23445399 -116871366 + THE1C LTR MaLR 1 375 0 1895 113 39 53 chr10 23445399 23445566 -116871199 - MER7C DNA MER2_type -2828 200 32 1233 133 76 4 chr10 23445577 23445626 -116871139 + Tigger7 DNA MER2_type 2247 2291 -196 1904 126 19 35 chr10 23445626 23445936 -116870829 - AluSx SINE Alu -7 305 1 1233 133 76 4 chr10 23445936 23446111 -116870654 + Tigger7 DNA MER2_type 2291 2487 0 452 312 141 44 chr10 23446111 23446406 -116870359 - L2 LINE L2 -680 2634 2369 2004 141 10 3 chr10 23446406 23446704 -116870061 + AluSx SINE Alu 1 300 -12 452 312 141 44 chr10 23446704 23446975 -116869790 - L2 LINE L2 -945 2369 2013 1708 187 82 41 chr10 23446985 23447379 -116869386 - MSTB LTR MaLR -1 400 1 2543 48 3 0 chr10 23447389 23447684 -116869081 - AluY SINE Alu -15 296 1 2258 85 0 10 chr10 23447684 23447979 -116868786 - AluSc SINE Alu -17 292 1 804 173 0 0 chr10 23448003 23448130 -116868635 - FLAM_C SINE Alu -16 127 1 279 188 0 50 chr10 23448213 23448314 -116868451 + (TA)n Simple_repeat Simple_repeat 1 96 0 262 322 0 0 chr10 23448325 23448412 -116868353 - L1MC4 LINE L1 -1342 6700 6614 236 261 45 23 chr10 23448334 23448422 -116868343 + L1MC4 LINE L1 6614 6703 -1339 * 1906 145 3 19 chr10 23448429 23448740 -116868025 - AluJb SINE Alu -6 306 1 2168 107 3 3 chr10 23449278 23449578 -116867187 - AluSp SINE Alu -13 300 1 2049 124 10 0 chr10 23450122 23450413 -116866352 + AluSx SINE Alu 1 294 -18 1541 161 9 82 chr10 23450634 23450964 -116865801 + AluJb SINE Alu 1 306 -6 339 225 159 84 chr10 23451471 23451576 -116865189 - L1MC4 LINE L1 -1864 5944 5848 2088 124 16 10 chr10 23451576 23451882 -116864883 - AluSx SINE Alu -3 309 2 339 225 159 84 chr10 23451882 23452167 -116864598 - L1MC4 LINE L1 -1960 5848 5525 351 158 87 47 chr10 23452190 23452317 -116864448 - L1MC4 LINE L1 -2340 5468 5337 1354 156 176 4 chr10 23452337 23452593 -116864172 - AluSg1 SINE Alu -9 300 1 819 224 6 18 chr10 23452841 23453006 -116863759 - FRAM SINE Alu -12 164 2 180 219 0 0 chr10 23453399 23453440 -116863325 + C-rich Low_complexity Low_complexity 3 43 0 1547 168 24 40 chr10 23453460 23453757 -116863008 - AluJo SINE Alu -20 292 1 884 259 39 65 chr10 23453770 23453861 -116862904 - L1MEd LINE L1 -2708 3421 3329 2246 109 3 0 chr10 23453861 23454155 -116862610 - AluSx SINE Alu -17 295 1 884 259 39 65 chr10 23454155 23454553 -116862212 - L1MEd LINE L1 -2800 3329 2945 1511 134 4 35 chr10 23454555 23454816 -116861949 - AluJb SINE Alu 0 312 60 301 243 0 0 chr10 23454851 23454925 -116861840 - L1MEd LINE L1 -3176 2953 2880 24 0 0 0 chr10 23455083 23455107 -116861658 + AT_rich Low_complexity Low_complexity 1 24 0 2055 145 10 0 chr10 23455240 23455537 -116861228 - AluSx SINE Alu -12 300 1 2393 62 0 28 chr10 23455960 23456280 -116860485 - AluY SINE Alu 0 311 1 429 306 97 49 chr10 23456328 23456616 -116860149 - L1MEd LINE L1 -4874 1245 972 1581 183 38 3 chr10 23456616 23456905 -116859860 - AluJo SINE Alu -13 299 1 429 306 97 49 chr10 23456905 23457161 -116859604 - L1MEd LINE L1 -5147 972 661 2079 145 3 0 chr10 23457161 23457472 -116859293 + AluSx SINE Alu 1 312 0 429 306 97 49 chr10 23457472 23457599 -116859166 - L1MEd LINE L1 -5458 661 541 2092 107 13 19 chr10 23457785 23458093 -116858672 + AluSp SINE Alu 1 306 -7 1118 32 0 0 chr10 23458241 23458365 -116858400 + AluSp/q SINE Alu 174 297 -16 26 30 0 0 chr10 23459630 23459663 -116857102 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr10 23460152 23460177 -116856588 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr10 23460269 23460296 -116856469 + AT_rich Low_complexity Low_complexity 1 27 0 3604 230 115 22 chr10 23460586 23460880 -116855885 - L1MC4 LINE L1 0 8042 7777 1971 149 3 7 chr10 23460880 23461188 -116855577 - AluSx SINE Alu -3 309 3 3604 230 115 22 chr10 23461188 23462107 -116854658 - L1MC4 LINE L1 -265 7777 6636 1870 143 17 20 chr10 23462120 23462414 -116854351 + AluSx SINE Alu 1 293 -19 2240 98 3 3 chr10 23462416 23462711 -116854054 + AluSg SINE Alu 1 295 -15 1256 116 0 0 chr10 23462711 23462875 -116853890 + AluSg/x SINE Alu 132 295 -15 470 246 166 0 chr10 23462913 23463100 -116853665 - L1MC4 LINE L1 -1363 6679 6462 1576 174 4 29 chr10 23463109 23463390 -116853375 - AluJb SINE Alu -38 274 1 272 292 81 47 chr10 23463490 23463726 -116853039 - L1M4 LINE L1 -1159 4987 4744 315 0 0 0 chr10 23463887 23463922 -116852843 + (CA)n Simple_repeat Simple_repeat 2 36 0 1679 198 7 7 chr10 23464471 23464764 -116852001 - AluJb SINE Alu -19 293 1 1285 203 23 62 chr10 23465049 23465355 -116851410 - AluJo SINE Alu -8 294 1 207 0 0 0 chr10 23465365 23465388 -116851377 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2471 47 0 13 chr10 23466252 23466550 -116850215 - AluY SINE Alu -17 294 1 1997 122 13 45 chr10 23466573 23466884 -116849881 - AluSq SINE Alu -12 301 1 230 232 10 61 chr10 23467033 23467132 -116849633 - L1MC5 LINE L1 -51 7910 7817 1860 195 49 42 chr10 23467149 23467600 -116849165 - MLT1C LTR MaLR -13 454 1 1018 238 49 121 chr10 23467601 23467845 -116848920 - MLT1C-int LTR MaLR -1 1734 1474 1742 127 45 4 chr10 23467845 23468113 -116848652 + AluSx SINE Alu 11 289 -23 1018 238 49 121 chr10 23468113 23468351 -116848414 - MLT1C-int LTR MaLR -261 1474 946 852 188 0 0 chr10 23468491 23468629 -116848136 + FAM SINE Alu 1 48 -1 1252 183 20 36 chr10 23468629 23468911 -116847854 - MER47B DNA MER2_type -84 334 2 1390 187 41 10 chr10 23468961 23469255 -116847510 - AluJb SINE Alu -9 303 1 1784 158 121 36 chr10 23469385 23469772 -116846993 + Tigger1 DNA MER2_type 2 421 -1997 4404 147 33 4 chr10 23469772 23470495 -116846270 + Tigger1 DNA MER2_type 1326 2069 -349 661 195 53 0 chr10 23470499 23470612 -116846153 + FLAM_C SINE Alu 2 119 -24 394 228 0 0 chr10 23470634 23470713 -116846052 + Tigger1 DNA MER2_type 2109 2187 -231 2221 100 13 3 chr10 23470837 23471136 -116845629 - AluSp SINE Alu -11 302 1 778 281 105 46 chr10 23471329 23471674 -116845091 - L1M4c LINE L1 -4582 2377 2054 1778 168 0 34 chr10 23471674 23471995 -116844770 - AluJo SINE Alu -2 310 1 778 281 105 46 chr10 23471995 23472325 -116844440 - L1M4c LINE L1 -4905 2054 1662 687 211 107 30 chr10 23472350 23472620 -116844145 - L1M4c LINE L1 -5361 1498 1208 312 226 68 23 chr10 23473113 23473246 -116843519 - L1M4c LINE L1 -5923 936 798 249 190 0 0 chr10 23473336 23473394 -116843371 - L1MA7 LINE L1 -2 6289 6232 192 77 0 0 chr10 23473400 23473426 -116843339 + (CA)n Simple_repeat Simple_repeat 1 26 0 668 290 62 53 chr10 23473436 23473757 -116843008 - L1M4c LINE L1 -6049 810 487 1026 243 84 13 chr10 23473803 23474112 -116842653 - L1M4c LINE L1 -6489 370 40 32 26 0 0 chr10 23474137 23474176 -116842589 + AT_rich Low_complexity Low_complexity 1 39 0 2332 90 0 37 chr10 23474503 23474825 -116841940 - AluSq SINE Alu -1 312 3 332 261 72 14 chr10 23476190 23476328 -116840437 + MIR SINE MIR 110 255 -7 2264 118 3 0 chr10 23476431 23476737 -116840028 + AluSx SINE Alu 2 308 -4 1801 177 0 13 chr10 23477139 23477450 -116839315 + AluSx SINE Alu 2 308 -4 1854 133 29 42 chr10 23477458 23477766 -116838999 + AluJo SINE Alu 1 304 -8 2362 103 3 0 chr10 23478694 23479005 -116837760 + AluSp SINE Alu 1 312 -1 22 0 0 0 chr10 23479488 23479510 -116837255 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 23480096 23480124 -116836641 + AT_rich Low_complexity Low_complexity 1 28 0 198 103 0 0 chr10 23480589 23480618 -116836147 + (TA)n Simple_repeat Simple_repeat 1 29 0 785 154 60 20 chr10 23481391 23481540 -116835225 + AluJb SINE Alu 133 287 -25 1875 116 37 34 chr10 23481745 23482039 -116834726 + AluSg SINE Alu 1 295 -15 778 172 0 0 chr10 23482154 23482282 -116834483 - AluSg/x SINE Alu -14 298 171 1754 124 27 8 chr10 23482283 23482542 -116834223 - AluSg SINE Alu -44 266 3 375 23 0 0 chr10 23482544 23482588 -116834177 + (CA)n Simple_repeat Simple_repeat 2 45 0 2360 68 26 23 chr10 23483437 23483746 -116833019 - AluSg SINE Alu 0 310 1 321 243 27 0 chr10 23483862 23483936 -116832829 + Tigger5 DNA MER2_type 1 76 -2247 396 205 0 0 chr10 23483939 23484017 -116832748 - Tigger5 DNA MER2_type -4 2319 2242 24 53 0 0 chr10 23484169 23484207 -116832558 + AT_rich Low_complexity Low_complexity 1 38 0 1960 109 32 3 chr10 23484216 23484501 -116832264 - AluSq SINE Alu -20 293 1 1916 59 4 43 chr10 23484506 23484762 -116832003 - AluY SINE Alu -15 296 51 2444 58 0 3 chr10 23484769 23485063 -116831702 - AluY SINE Alu -18 293 1 21 36 0 0 chr10 23485122 23485150 -116831615 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 23485412 23485436 -116831329 + AT_rich Low_complexity Low_complexity 1 24 0 1748 145 16 35 chr10 23485665 23485982 -116830783 - AluJo SINE Alu -1 311 1 2299 242 70 27 chr10 23486212 23486964 -116829801 - MER21B LTR ERV1 -60 803 19 321 195 65 26 chr10 23486988 23487065 -116829700 - MER21B LTR ERV1 -776 87 8 185 152 0 30 chr10 23487342 23487375 -116829390 - MIR SINE MIR -145 117 86 572 184 54 78 chr10 23489918 23490163 -116826602 - MSTC LTR MaLR -151 245 3 997 207 51 113 chr10 23490581 23491094 -116825671 - L1MC4 LINE L1 -6 8036 7556 586 312 19 31 chr10 23491252 23491611 -116825154 - MLT1F-int LTR MaLR -770 601 247 1066 246 112 57 chr10 23491759 23491950 -116824815 - MLT1F LTR MaLR 0 542 363 2154 117 3 19 chr10 23491950 23492259 -116824506 - AluSx SINE Alu -8 304 1 1983 116 33 23 chr10 23492259 23492562 -116824203 - AluSx SINE Alu -6 306 1 1066 246 112 57 chr10 23492562 23492772 -116823993 - MLT1F LTR MaLR -178 364 118 184 125 0 42 chr10 23492790 23492838 -116823927 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 234 137 20 0 chr10 23492844 23492895 -116823870 - L1MB4 LINE L1 -2 6178 6127 233 214 236 0 chr10 23492919 23493008 -116823757 - MLT1F LTR MaLR -432 110 1 471 208 72 8 chr10 23493008 23493133 -116823632 - L1MC4 LINE L1 -763 7279 7147 787 178 13 32 chr10 23493347 23493504 -116823261 + FRAM SINE Alu 13 166 -10 806 210 75 50 chr10 23493949 23494337 -116822428 + LTR40b LTR ERVL 1 462 0 2504 58 0 13 chr10 23494548 23494859 -116821906 + AluY SINE Alu 2 308 -3 21 0 0 0 chr10 23494951 23494972 -116821793 + AT_rich Low_complexity Low_complexity 1 21 0 1650 146 158 47 chr10 23494996 23495381 -116821384 - MSTA LTR MaLR 0 428 1 26 30 0 0 chr10 23495938 23495971 -116820794 + AT_rich Low_complexity Low_complexity 1 33 0 187 349 0 15 chr10 23496045 23496111 -116820654 - L2 LINE L2 -8 3305 3241 468 253 57 0 chr10 23496331 23496489 -116820276 - MER104 DNA Tc2 -13 167 1 404 217 160 0 chr10 23496658 23496764 -116820001 + MIR SINE MIR 114 236 -26 1552 168 66 11 chr10 23496941 23497215 -116819550 + AluJo SINE Alu 1 289 -23 2467 238 75 35 chr10 23497227 23497501 -116819264 - L1MC4 LINE L1 -155 7887 7625 1769 127 35 0 chr10 23497501 23497760 -116819005 + AluSx SINE Alu 26 293 -19 2467 238 75 35 chr10 23497760 23498532 -116818233 - L1MC4 LINE L1 -417 7625 6799 1875 134 19 0 chr10 23498896 23499164 -116817601 - AluSx SINE Alu -19 293 21 953 126 0 0 chr10 23499238 23499381 -116817384 - AluSp/q SINE Alu -6 307 165 403 175 0 0 chr10 23499381 23499444 -116817321 - AluS SINE Alu -246 63 1 198 0 0 0 chr10 23499444 23499466 -116817299 + (T)n Simple_repeat Simple_repeat 1 22 0 1675 173 0 29 chr10 23499635 23499948 -116816817 - AluJo SINE Alu -8 304 1 1410 109 5 0 chr10 23500084 23500277 -116816488 - AluSq SINE Alu -4 309 116 3225 294 66 17 chr10 23500503 23501677 -116815088 - HERVL40 LTR ERVL -2769 2761 1530 503 202 0 0 chr10 23501679 23501768 -116814997 - MER58C DNA MER1_type 0 215 127 629 249 75 19 chr10 23501861 23502074 -116814691 - HERVL40 LTR ERVL -3995 1535 1311 545 174 0 0 chr10 23502078 23502164 -116814601 + AluJ/FLAM SINE Alu 1 86 -226 300 244 70 43 chr10 23502196 23502311 -116814454 - HERVL40 LTR ERVL -4218 1312 1195 1014 251 67 25 chr10 23502317 23502644 -116814121 - HERVL40 LTR ERVL -5188 342 2 1762 149 41 28 chr10 23502707 23503509 -116813256 - MER21B LTR ERV1 -49 814 70 286 136 17 17 chr10 23503622 23503681 -116813084 - MER21A LTR ERV1 -864 67 9 229 109 91 0 chr10 23503681 23503736 -116813029 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 451 123 71 18 chr10 23503736 23503906 -116812859 + (TA)n Simple_repeat Simple_repeat 2 180 0 1155 254 70 14 chr10 23503957 23504315 -116812450 - LTR40b LTR ERVL -84 378 1 549 274 82 21 chr10 23504406 23504708 -116812057 - MLT1J1 LTR MaLR -129 321 1 372 283 105 47 chr10 23504730 23504988 -116811777 - HAL1b LINE L1 -14 1334 1062 918 163 11 45 chr10 23504988 23505166 -116811599 + AluJo SINE Alu 104 275 -37 284 256 0 0 chr10 23505184 23505266 -116811499 - HAL1b LINE L1 -331 1017 936 332 301 65 0 chr10 23505284 23505407 -116811358 - MLT1L LTR MaLR -6 609 479 2196 92 3 7 chr10 23505587 23505882 -116810883 + AluSq SINE Alu 1 294 -19 2398 94 0 0 chr10 23505893 23506202 -116810563 + AluSx SINE Alu 1 309 -3 2259 112 0 16 chr10 23506535 23506847 -116809918 - AluSx SINE Alu -1 311 5 826 224 125 13 chr10 23506895 23507208 -116809557 - HAL1b LINE L1 -579 769 422 364 321 77 24 chr10 23507294 23507462 -116809303 - HAL1b LINE L1 -1096 252 76 1579 176 36 13 chr10 23508148 23508449 -116808316 - AluJb SINE Alu -4 308 1 187 384 41 0 chr10 23509123 23509196 -116807569 - L3 LINE CR1 -1273 304 229 2071 140 3 3 chr10 23509441 23509748 -116807017 + AluSx SINE Alu 1 307 -5 2448 66 0 3 chr10 23510372 23510674 -116806091 - AluY SINE Alu -10 301 1 297 263 174 54 chr10 23510695 23510893 -116805872 - L1ME LINE L1 -324 5797 5559 651 209 0 16 chr10 23510893 23511022 -116805743 + FLAM_A SINE Alu 1 127 -6 297 263 174 54 chr10 23511022 23511082 -116805683 - L1ME LINE L1 -562 5559 5508 23 78 0 0 chr10 23511266 23511317 -116805448 + AT_rich Low_complexity Low_complexity 1 51 0 2491 118 6 3 chr10 23512200 23512563 -116804202 - THE1B LTR MaLR 0 364 1 1737 178 0 4 chr10 23512619 23512895 -116803870 - AluJb SINE Alu -37 275 1 444 252 110 62 chr10 23513016 23513435 -116803330 - MLT1H LTR MaLR -107 448 52 318 118 0 78 chr10 23513519 23513605 -116803160 + AluJo SINE Alu 80 139 -163 1136 188 109 33 chr10 23513608 23513884 -116802881 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 23514271 23514292 -116802473 + AT_rich Low_complexity Low_complexity 1 21 0 2125 114 0 0 chr10 23514553 23514888 -116801877 - AluSg SINE Alu 0 335 1 2320 109 0 0 chr10 23515419 23515730 -116801035 - AluY SINE Alu 0 311 1 401 283 160 11 chr10 23515865 23516052 -116800713 + MIR SINE MIR 48 262 0 1590 255 80 34 chr10 23516090 23516589 -116800176 - L2 LINE L2 -434 2880 2352 2474 191 43 74 chr10 23516589 23517234 -116799531 - MLT1E2 LTR MaLR -1 625 1 1590 255 80 34 chr10 23517234 23517286 -116799479 - L2 LINE L2 -962 2352 2304 412 248 69 41 chr10 23517715 23517893 -116798872 - MIR SINE MIR -63 145 17 2203 113 0 7 chr10 23518468 23518778 -116797987 + AluSg SINE Alu 3 310 0 1327 101 0 0 chr10 23519343 23519511 -116797254 + AluSq SINE Alu 1 168 -145 950 142 0 17 chr10 23519531 23519707 -116797058 + (GGAGAA)n Simple_repeat Simple_repeat 3 175 0 438 232 0 0 chr10 23519720 23519832 -116796933 + GA-rich Low_complexity Low_complexity 49 160 0 2160 110 0 17 chr10 23520237 23520538 -116796227 - AluSx SINE Alu -16 296 1 2107 131 3 0 chr10 23522117 23522415 -116794350 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 23522820 23522850 -116793915 + AT_rich Low_complexity Low_complexity 1 30 0 204 240 0 0 chr10 23523217 23523267 -116793498 + (TA)n Simple_repeat Simple_repeat 2 51 0 516 156 3 75 chr10 23523329 23523450 -116793315 - L1MD3 LINE L1 -13 7982 7655 1674 115 11 19 chr10 23526645 23526905 -116789860 + AluSq SINE Alu 1 258 -55 2128 245 199 92 chr10 23527223 23528266 -116788499 - L2 LINE L2 -1090 2224 885 715 162 0 0 chr10 23528266 23528377 -116788388 + FLAM_C SINE Alu 1 111 -32 2128 245 199 92 chr10 23528377 23528666 -116788099 - L2 LINE L2 -2429 885 628 1425 196 49 28 chr10 23528669 23528995 -116787770 - MER58B DNA MER1_type -1 340 8 1159 276 138 21 chr10 23529006 23529520 -116787245 - L2 LINE L2 -2736 578 5 493 84 0 0 chr10 23529690 23529761 -116787004 - L1MA4 LINE L1 -9 6291 6221 2274 111 0 3 chr10 23530486 23530792 -116785973 + AluSx SINE Alu 2 306 -6 1611 229 88 27 chr10 23531511 23532022 -116784743 - L1ME1 LINE L1 -21 6145 5604 2086 105 3 10 chr10 23532045 23532341 -116784424 - AluY SINE Alu -17 294 1 655 182 120 47 chr10 23532342 23532600 -116784165 - L1ME1 LINE L1 -752 5394 5118 2088 118 10 0 chr10 23532888 23533184 -116783581 - AluSq SINE Alu -14 299 1 300 230 0 0 chr10 23533287 23533361 -116783404 - L1MCa LINE L1 -1791 4635 4562 1495 157 57 21 chr10 23533363 23533643 -116783122 - AluJb SINE Alu -22 290 1 2098 235 81 35 chr10 23533808 23533852 -116782913 - L1MCa LINE L1 -3039 3387 3346 2173 113 3 0 chr10 23533852 23534154 -116782611 + AluSx SINE Alu 1 303 -9 1796 112 15 4 chr10 23534154 23534411 -116782354 + AluSq SINE Alu 44 305 -8 2098 235 81 35 chr10 23534411 23535156 -116781609 - L1MCa LINE L1 -3080 3346 2529 731 126 0 0 chr10 23535156 23535259 -116781506 - U6 snRNA snRNA -4 103 1 2098 235 81 35 chr10 23535259 23535534 -116781231 - L1MCa LINE L1 -3897 2529 2268 * 4906 212 74 24 chr10 23535525 23536874 -116779891 - L1MCa LINE L1 -4815 1611 195 1375 112 0 0 chr10 23536885 23537072 -116779693 - AluSp SINE Alu -4 309 123 2026 113 10 10 chr10 23537077 23537370 -116779395 - AluY SINE Alu -5 306 14 480 220 60 27 chr10 23537370 23537520 -116779245 - L1MCa LINE L1 -6252 174 20 902 184 126 95 chr10 23537521 23537824 -116778941 - L1MEc LINE L1 -3118 3097 2774 1756 85 89 26 chr10 23537824 23538095 -116778670 - AluSc SINE Alu -4 305 18 902 184 126 95 chr10 23538095 23538252 -116778513 - L1MEc LINE L1 -3441 2774 2623 992 220 55 124 chr10 23538306 23538451 -116778314 - L1MEc LINE L1 -3900 2496 2343 2280 125 0 0 chr10 23538451 23538763 -116778002 - AluSx SINE Alu 0 312 1 992 220 55 124 chr10 23538763 23538789 -116777976 - L1MEc LINE L1 -4053 2343 2317 1980 136 3 13 chr10 23538789 23539105 -116777660 - AluSp SINE Alu 0 313 1 992 220 55 124 chr10 23539105 23539262 -116777503 - L1MEc LINE L1 -4079 2317 2151 1402 157 114 0 chr10 23539262 23539517 -116777248 - AluSx SINE Alu -28 284 1 992 220 55 124 chr10 23539517 23539900 -116776865 - L1MEc LINE L1 -4245 2151 1833 2212 104 3 3 chr10 23539900 23540208 -116776557 + AluSc SINE Alu 1 308 -1 992 220 55 124 chr10 23540208 23540235 -116776530 - L1MEc LINE L1 -4563 1833 1806 610 203 112 21 chr10 23540256 23540399 -116776366 + Tigger7 DNA MER2_type 4 159 -2328 568 272 61 78 chr10 23540414 23541038 -116775727 - L1MEc LINE L1 -4581 1815 1203 23 0 0 0 chr10 23541154 23541177 -116775588 + AT_rich Low_complexity Low_complexity 1 23 0 259 214 38 145 chr10 23543033 23543164 -116773601 - L2 LINE L2 0 3313 3197 1957 120 32 0 chr10 23544549 23544832 -116771933 - AluSx SINE Alu -18 294 3 1380 161 42 110 chr10 23544891 23545025 -116771740 + AluJb SINE Alu 1 143 -169 1775 170 11 0 chr10 23545025 23545302 -116771463 + AluJb SINE Alu 3 282 -30 1380 161 42 110 chr10 23545302 23545502 -116771263 + AluJb SINE Alu 143 312 0 378 0 0 0 chr10 23545686 23545728 -116771037 + (TG)n Simple_repeat Simple_repeat 2 43 0 713 168 10 149 chr10 23545729 23545937 -116770828 - AluY SINE Alu -26 285 107 1391 98 0 5 chr10 23545938 23546122 -116770643 - AluSg SINE Alu -127 183 1 198 0 0 0 chr10 23546836 23546858 -116769907 + (T)n Simple_repeat Simple_repeat 1 22 0 198 103 0 0 chr10 23548481 23548510 -116768255 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 182 268 36 0 chr10 23548510 23548566 -116768199 - L2 LINE L2 -300 2972 2915 * 358 242 248 0 chr10 23548561 23548710 -116768055 - MIR SINE MIR 0 262 77 617 281 26 70 chr10 23548770 23548998 -116767767 - MER20 DNA MER1_type 0 219 2 2124 82 43 3 chr10 23549665 23549947 -116766818 + AluY SINE Alu 1 293 -18 2418 90 0 0 chr10 23549956 23550268 -116766497 + AluSx SINE Alu 1 312 0 232 255 0 0 chr10 23550496 23550547 -116766218 - MIR SINE MIR -19 243 193 1746 166 29 26 chr10 23550897 23551240 -116765525 + MER2 DNA MER2_type 1 344 0 410 264 41 8 chr10 23551376 23551497 -116765268 + L2 LINE L2 3148 3272 0 1989 131 0 3 chr10 23551613 23551920 -116764845 - AluSc SINE Alu 0 306 1 848 72 88 0 chr10 23553004 23553129 -116763636 + MER85 DNA T2_type 1 136 -3 997 151 42 26 chr10 23553203 23553395 -116763370 - MER46A DNA MER2_type 0 236 42 2081 117 33 0 chr10 23553719 23554018 -116762747 - AluSx SINE Alu -3 309 1 1992 113 58 0 chr10 23554213 23554487 -116762278 + AluSx SINE Alu 7 296 -16 212 264 138 11 chr10 23554877 23554964 -116761801 - MIR SINE MIR -161 101 4 820 163 65 0 chr10 23557265 23557418 -116759347 - AluSq SINE Alu -14 299 137 955 175 0 48 chr10 23557507 23557696 -116759069 - FRAM SINE Alu 0 176 1 238 281 55 85 chr10 23557766 23558001 -116758764 + L2 LINE L2 2149 2376 -938 2215 95 0 24 chr10 23558865 23559159 -116757606 - AluSx SINE Alu -25 287 1 24 67 0 0 chr10 23559910 23559955 -116756810 + AT_rich Low_complexity Low_complexity 1 45 0 1965 135 3 3 chr10 23560218 23560521 -116756244 + AluSx SINE Alu 1 303 0 553 155 9 9 chr10 23563064 23563180 -116753585 + (TA)n Simple_repeat Simple_repeat 2 117 0 228 391 71 18 chr10 23563234 23563459 -116753306 - L2 LINE L2 -527 2787 2551 26 64 0 0 chr10 23563891 23563938 -116752827 + AT_rich Low_complexity Low_complexity 1 47 0 184 326 0 0 chr10 23564361 23564410 -116752355 + L2 LINE L2 2581 2629 -685 1827 147 3 29 chr10 23565402 23565709 -116751056 + AluSx SINE Alu 3 301 -11 252 0 0 0 chr10 23565839 23565867 -116750898 + (TTA)n Simple_repeat Simple_repeat 2 29 0 687 161 0 0 chr10 23565875 23565987 -116750778 - FLAM_C SINE Alu -31 112 1 1662 170 13 27 chr10 23566004 23566304 -116750461 - AluJo SINE Alu -16 296 1 578 307 31 21 chr10 23567130 23567456 -116749309 - L1MEd LINE L1 -4869 1250 922 293 193 0 0 chr10 23567559 23567616 -116749149 - L1MC4 LINE L1 0 8042 7986 784 239 56 0 chr10 23567617 23567814 -116748951 - L1MC4 LINE L1 -140 7902 7695 364 259 9 9 chr10 23567934 23568042 -116748723 - L1MC4 LINE L1 -697 7345 7238 779 172 89 6 chr10 23568043 23568212 -116748553 - L1MC4 LINE L1 -970 7072 6890 828 181 39 44 chr10 23568221 23568403 -116748362 - MLT1E2 LTR MaLR -3 623 443 517 192 32 16 chr10 23568413 23568538 -116748227 - MLT1E2 LTR MaLR -293 333 207 1318 133 133 8 chr10 23568576 23568816 -116747949 - AluSx SINE Alu -2 310 41 352 267 188 34 chr10 23568821 23568997 -116747768 - MLT1E2 LTR MaLR -420 204 2 253 236 81 34 chr10 23569081 23569229 -116747536 - L1MEd LINE L1 -5284 835 681 653 259 125 102 chr10 23569234 23569666 -116747099 - L1MEd LINE L1 -5473 646 205 27 29 0 0 chr10 23569706 23569740 -116747025 + AT_rich Low_complexity Low_complexity 1 34 0 329 73 0 0 chr10 23569837 23569878 -116746887 - MER4E LTR ERV1 -73 693 653 279 292 0 0 chr10 23569879 23569951 -116746814 - L1MEd LINE L1 -6046 73 2 298 258 72 0 chr10 23569988 23570085 -116746680 + L2 LINE L2 1868 1971 -1343 713 312 36 24 chr10 23570300 23570547 -116746218 + L2 LINE L2 2598 2847 -467 225 254 0 30 chr10 23570560 23570627 -116746138 - LTR67 LTR ERVL -3 554 490 2213 110 3 0 chr10 23570702 23571003 -116745762 + AluSq SINE Alu 1 302 -11 13630 206 52 41 chr10 23571440 23572385 -116744380 - L1M2 LINE L1 -2 7003 6070 2258 114 0 0 chr10 23572385 23572691 -116744074 - AluSx SINE Alu -5 307 2 13630 206 52 41 chr10 23572691 23575117 -116741648 - L1M2 LINE L1 -935 6070 3672 1903 136 3 11 chr10 23575117 23575403 -116741362 - AluSx SINE Alu -26 286 3 252 77 0 0 chr10 23575413 23575452 -116741313 + (TCTCG)n Simple_repeat Simple_repeat 2 40 0 2159 118 0 0 chr10 23575454 23575741 -116741024 - AluSc SINE Alu -22 287 1 13630 206 52 41 chr10 23575741 23577067 -116739698 - L1M2 LINE L1 -3341 3664 2354 2300 96 0 3 chr10 23577067 23577360 -116739405 - AluSg SINE Alu -18 292 1 13630 206 52 41 chr10 23577360 23577526 -116739239 - L1M2 LINE L1 -4651 2354 2191 1751 167 43 0 chr10 23577526 23577825 -116738940 - AluSx SINE Alu 0 312 1 13630 206 52 41 chr10 23577825 23577846 -116738919 - L1M2 LINE L1 -4814 2191 2172 261 0 0 0 chr10 23577846 23577875 -116738890 + (TC)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr10 23577874 23577900 -116738865 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 13630 206 52 41 chr10 23577875 23578234 -116738531 - L1M2 LINE L1 -4833 2172 1592 917 185 0 123 chr10 23578338 23578614 -116738151 + AluJb SINE Alu 69 310 -2 577 271 73 18 chr10 23579475 23579693 -116737072 + MIR SINE MIR 3 232 -30 21 71 0 0 chr10 23579913 23579955 -116736810 + AT_rich Low_complexity Low_complexity 1 42 0 271 288 133 61 chr10 23583714 23584208 -116732557 - L2 LINE L2 -37 3276 2736 319 277 70 56 chr10 23584361 23584574 -116732191 - L2 LINE L2 -566 2748 2533 1134 129 12 0 chr10 23584581 23584751 -116732014 - AluSg/x SINE Alu -25 285 114 373 183 49 24 chr10 23584881 23584963 -116731802 - AluS SINE Alu -218 84 1 720 296 246 14 chr10 23584966 23585462 -116731303 - L2 LINE L2 -778 2536 1926 548 183 0 0 chr10 23585462 23585555 -116731210 + AluJb SINE Alu 136 228 -84 317 269 321 15 chr10 23585610 23586068 -116730697 - L2 LINE L2 -1433 1881 1284 2229 89 3 3 chr10 23586369 23586661 -116730104 + AluSg SINE Alu 1 292 -18 914 197 61 22 chr10 23587006 23587234 -116729531 + L2 LINE L2 1897 2133 -1181 5681 244 89 16 chr10 23587341 23588802 -116727963 - L1M2 LINE L1 -5279 1570 3 273 260 0 0 chr10 23588888 23588938 -116727827 + L1M2 LINE L1 844 893 -5956 291 313 31 0 chr10 23588966 23589062 -116727703 - MIR SINE MIR -75 187 89 315 310 103 7 chr10 23589481 23589636 -116727129 + L2 LINE L2 1962 2131 -1183 528 330 145 46 chr10 23589676 23589793 -116726972 + L2 LINE L2 2383 2487 -785 2661 30 3 0 chr10 23589793 23590094 -116726671 - AluY SINE Alu -9 302 1 528 330 145 46 chr10 23590094 23590773 -116725992 + L2 LINE L2 2487 3263 -9 215 125 25 0 chr10 23590773 23590813 -116725952 + GA-rich Low_complexity Low_complexity 4 44 0 559 266 90 41 chr10 23591494 23591739 -116725026 - MIR SINE MIR -5 257 3 2235 103 23 0 chr10 23591833 23592133 -116724632 - AluSx SINE Alu -5 307 1 1629 145 52 45 chr10 23592335 23592645 -116724120 - AluJb SINE Alu 0 312 1 500 288 103 52 chr10 23592998 23593269 -116723496 - MER102a DNA MER1_type 0 330 46 223 321 88 15 chr10 23593313 23593450 -116723315 + L2 LINE L2 2221 2367 -947 314 314 102 0 chr10 23593484 23593602 -116723163 + MIR SINE MIR 49 178 -84 189 331 108 29 chr10 23593630 23593769 -116722996 + L2 LINE L2 2375 2524 -790 2189 113 3 0 chr10 23593890 23594181 -116722584 + AluSx SINE Alu 1 292 -20 1597 152 18 73 chr10 23594190 23594518 -116722247 + AluJo SINE Alu 1 310 -2 355 274 87 115 chr10 23594541 23594793 -116721972 + L2 LINE L2 3028 3272 0 186 43 0 0 chr10 23594950 23594973 -116721792 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1077 197 10 25 chr10 23594977 23595175 -116721590 - AluJo SINE Alu -31 281 87 1233 178 53 0 chr10 23595378 23595586 -116721179 - MER20 DNA MER1_type 0 219 1 310 242 121 0 chr10 23696075 23696166 -116620599 - MIR SINE MIR -33 229 128 22 70 0 0 chr10 23696681 23696724 -116620041 + AT_rich Low_complexity Low_complexity 1 43 0 236 241 17 0 chr10 23696886 23696944 -116619821 + 5S rRNA rRNA 34 92 -29 2208 126 0 0 chr10 23697147 23697448 -116619317 + AluSx SINE Alu 1 301 -11 4003 83 3 23 chr10 23697538 23697658 -116619107 - MER41A LTR ERV1 0 554 433 2243 85 3 0 chr10 23697658 23697975 -116618790 + AluSp SINE Alu 1 318 0 4003 83 3 23 chr10 23697975 23698418 -116618347 - MER41A LTR ERV1 -121 433 1 346 238 101 70 chr10 23698421 23698648 -116618117 - L1MEc LINE L1 -4103 2293 2060 752 105 65 0 chr10 23698737 23698861 -116617904 + MLT1C LTR MaLR 1 132 -335 2049 107 0 11 chr10 23699138 23699453 -116617312 - AluSg SINE Alu 0 316 5 1457 106 5 0 chr10 23699785 23699974 -116616791 + AluSx SINE Alu 1 190 -122 13607 138 29 21 chr10 23700258 23700297 -116616468 + Tigger1 DNA MER2_type 17 54 -2364 2188 116 0 0 chr10 23700297 23700591 -116616174 - AluY SINE Alu -17 294 1 13607 138 29 21 chr10 23700591 23702814 -116613951 + Tigger1 DNA MER2_type 54 2301 -117 2175 120 0 10 chr10 23702814 23703122 -116613643 - AluSx SINE Alu -7 305 1 13607 138 29 21 chr10 23703122 23703241 -116613524 + Tigger1 DNA MER2_type 2301 2418 0 738 277 146 17 chr10 23703242 23703653 -116613112 - L1ME3A LINE L1 -51 6119 5656 3938 160 23 12 chr10 23703699 23704435 -116612330 + Tigger2 DNA MER2_type 1 744 -1974 1011 169 94 0 chr10 23704492 23704705 -116612060 + Tigger2 DNA MER2_type 2486 2718 0 771 285 99 21 chr10 23704718 23705150 -116611615 - L1ME3A LINE L1 -595 5575 5178 210 71 0 0 chr10 23705150 23705178 -116611587 + (TA)n Simple_repeat Simple_repeat 2 29 0 1616 208 3 0 chr10 23705178 23705466 -116611299 - AluJb SINE Alu -20 292 4 771 285 99 21 chr10 23705466 23706050 -116610715 - L1ME3A LINE L1 -991 5179 4475 875 193 0 0 chr10 23706050 23706200 -116610565 + AluJo SINE Alu 1 150 -162 419 161 0 0 chr10 23706309 23706396 -116610369 + L1ME LINE L1 5118 5204 -942 465 197 8 63 chr10 23706443 23706570 -116610195 - LTR40b LTR ERVL -54 408 289 520 255 106 34 chr10 23706744 23706952 -116609813 - HERVL40 LTR ERVL -4371 1159 937 186 158 84 116 chr10 23706957 23707052 -116609713 + MIR SINE MIR 50 141 -121 597 237 19 121 chr10 23707052 23707309 -116609456 - HERVL40 LTR ERVL -4703 827 597 1441 263 50 64 chr10 23707360 23707938 -116608827 - HERVL40 LTR ERVL -4960 570 1 1398 198 52 27 chr10 23707939 23708267 -116608498 - LTR40b LTR ERVL 0 462 127 2280 58 30 30 chr10 23708299 23708594 -116608171 + AluY SINE Alu 1 295 -16 406 198 0 22 chr10 23708644 23708735 -116608030 - MLT1F LTR MaLR -289 253 165 246 62 0 0 chr10 23708735 23708767 -116607998 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 492 18 0 0 chr10 23708766 23708823 -116607942 + (GA)n Simple_repeat Simple_repeat 2 58 0 340 188 0 0 chr10 23708857 23708921 -116607844 + L1MC4 LINE L1 6640 6703 -1339 330 26 0 0 chr10 23708926 23708965 -116607800 + (TG)n Simple_repeat Simple_repeat 2 40 0 748 244 0 0 chr10 23708967 23709123 -116607642 - MLT1F LTR MaLR -380 162 7 349 252 56 0 chr10 23709130 23709237 -116607528 + L1MD3 LINE L1 7869 7981 -14 720 181 100 38 chr10 23709267 23709427 -116607338 + AluJo SINE Alu 138 307 -5 1688 216 40 47 chr10 23709435 23709625 -116607140 + L1ME LINE L1 5209 5399 -765 2332 108 0 0 chr10 23709625 23709921 -116606844 + AluSg SINE Alu 1 296 -14 1688 216 40 47 chr10 23709921 23710313 -116606452 + L1ME LINE L1 5399 5783 -381 329 258 33 8 chr10 23710308 23710428 -116606337 - L1M4 LINE L1 -884 5262 5140 * 881 222 19 5 chr10 23710479 23710691 -116606074 - LTR52-int LTR ERVL -1081 2475 2261 3249 182 40 13 chr10 23710835 23711518 -116605247 - LTR52-int LTR ERVL -3587 2098 1398 981 261 4 8 chr10 23711716 23711976 -116604789 + MIR SINE MIR 1 259 -3 312 332 153 37 chr10 23712519 23712787 -116603978 + L3 LINE CR1 1042 1340 -237 1981 133 0 3 chr10 23712788 23713074 -116603691 + AluSx SINE Alu 1 285 -27 23 33 0 0 chr10 23713080 23713110 -116603655 + AT_rich Low_complexity Low_complexity 1 30 0 589 72 80 0 chr10 23713110 23713374 -116603391 + (TA)n Simple_repeat Simple_repeat 1 285 0 261 299 0 0 chr10 23713374 23713441 -116603324 + L3 LINE CR1 1366 1432 -145 269 213 33 0 chr10 23713740 23713801 -116602964 + L2 LINE L2 3210 3272 0 2241 108 0 7 chr10 23713978 23714285 -116602480 - AluSx SINE Alu -7 305 1 322 198 151 38 chr10 23714581 23714687 -116602078 + L2 LINE L2 3192 3309 -4 283 294 59 15 chr10 23714728 23714864 -116601901 + MLT1J2 LTR MaLR 67 208 -242 2026 115 35 0 chr10 23715213 23715501 -116601264 - AluSx SINE Alu -12 300 3 1453 117 49 12 chr10 23715657 23715904 -116600861 + L1PA10 LINE L1 5891 6146 -22 619 148 23 0 chr10 23715906 23715920 -116600845 + GA-rich Low_complexity Low_complexity 1 13 -242 611 26 13 0 chr10 23715920 23715997 -116600768 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 619 148 23 0 chr10 23715997 23716156 -116600609 + GA-rich Low_complexity Low_complexity 13 255 0 365 123 0 0 chr10 23716156 23716213 -116600552 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 230 270 95 0 chr10 23716721 23716784 -116599981 - L3 LINE CR1 -19 1558 1490 1745 159 19 30 chr10 23716794 23717164 -116599601 + MER47A DNA MER2_type 1 366 0 246 143 16 32 chr10 23717252 23717315 -116599450 + T-rich Low_complexity Low_complexity 3 64 0 397 285 60 33 chr10 23717316 23717467 -116599298 + MIR3 SINE MIR 47 201 -7 268 152 0 0 chr10 23718260 23718306 -116598459 - Tigger2 DNA MER2_type -2671 47 2 937 211 139 28 chr10 23718444 23718763 -116598002 - MLT1A1 LTR MaLR -13 413 1 1281 220 9 88 chr10 23718769 23719224 -116597541 - L1ME LINE L1 -392 5778 5360 1937 107 33 0 chr10 23719261 23719532 -116597233 + AluY SINE Alu 32 311 0 255 327 222 33 chr10 23719936 23720453 -116596312 + L2 LINE L2 1435 2049 -1265 326 359 101 29 chr10 23720489 23720765 -116596000 + L2 LINE L2 2219 2514 -800 397 48 81 0 chr10 23720797 23720859 -116595906 - L1MA9 LINE L1 -1 6311 6245 272 246 17 76 chr10 23721482 23721600 -116595165 + MLT2E LTR ERVL 32 142 -486 185 135 243 0 chr10 23722145 23722182 -116594583 - MIR SINE MIR -119 143 98 801 317 117 41 chr10 23722196 23722735 -116594030 - L1M4 LINE L1 -2873 3771 3274 2481 77 0 0 chr10 23722735 23723046 -116593719 - AluY SINE Alu 0 311 1 801 317 117 41 chr10 23723046 23723483 -116593282 - L1M4 LINE L1 -3370 3274 2721 468 240 138 30 chr10 23723908 23724241 -116592524 - L1MC5 LINE L1 -36 7925 7557 1403 131 0 31 chr10 23724343 23724572 -116592193 + AluSg/x SINE Alu 90 311 -1 1598 213 41 61 chr10 23724618 23724987 -116591778 - L1MB7 LINE L1 -8 6176 5820 1563 172 6 57 chr10 23724987 23725301 -116591464 - AluJo SINE Alu -14 298 1 1598 213 41 61 chr10 23725301 23725470 -116591295 - L1MB7 LINE L1 -364 5820 5649 1312 250 46 23 chr10 23725452 23726130 -116590635 - L1M4 LINE L1 -4187 2459 1672 * 1830 167 68 36 chr10 23726130 23726573 -116590192 - LTR2B LTR ERV1 0 490 34 3806 218 97 79 chr10 23726592 23727065 -116589700 - L1M4 LINE L1 -4865 1677 1214 2156 105 17 3 chr10 23727065 23727361 -116589404 + AluSx SINE Alu 1 300 -12 3806 218 97 79 chr10 23727361 23727500 -116589265 - L1M4 LINE L1 -5328 1214 1079 1715 153 47 0 chr10 23727500 23727774 -116588991 + AluSx SINE Alu 1 287 -25 3806 218 97 79 chr10 23727774 23728639 -116588126 - L1M4 LINE L1 -5463 1079 164 1875 167 3 6 chr10 23728639 23728951 -116587814 - AluJo SINE Alu -1 311 1 3806 218 97 79 chr10 23728951 23729114 -116587651 - L1M4 LINE L1 -6378 164 5 533 266 77 40 chr10 23729133 23729486 -116587279 - L1M4 LINE L1 -2148 3998 3633 536 213 37 37 chr10 23729491 23729655 -116587110 - L1MD2 LINE L1 0 6359 6196 267 298 26 18 chr10 23729666 23729780 -116586985 - L1MD2 LINE L1 -226 6133 6019 4734 123 31 89 chr10 23729780 23730206 -116586559 - MER4D LTR ERV1 0 903 454 412 119 0 0 chr10 23730206 23730273 -116586492 - Alu SINE Alu -9 303 237 4734 123 31 89 chr10 23730273 23730738 -116586027 - MER4D LTR ERV1 -449 454 1 2326 85 0 14 chr10 23730896 23731191 -116585574 - AluSx SINE Alu -21 291 1 1340 119 19 5 chr10 23731191 23731401 -116585364 - MER41E LTR ERV1 -299 213 1 429 237 30 46 chr10 23731512 23731643 -116585122 + MER3 DNA MER1_type 80 208 -1 1410 275 73 14 chr10 23731645 23732686 -116584079 - L1M4 LINE L1 -2820 3326 2225 2293 122 0 0 chr10 23732825 23733128 -116583637 - AluSx SINE Alu -9 303 1 398 274 0 25 chr10 23733227 23733281 -116583484 - L1MA10 LINE L1 -3 6331 6278 2513 244 51 20 chr10 23733281 23734333 -116582432 - L1ME1 LINE L1 -44 6122 5038 2155 115 0 3 chr10 23734333 23734637 -116582128 - AluY SINE Alu -8 303 1 2513 244 51 20 chr10 23734637 23734731 -116582034 - L1ME1 LINE L1 -1128 5038 4948 1502 161 3 71 chr10 23734733 23735057 -116581708 - AluJb SINE Alu -10 302 1 1195 244 85 16 chr10 23735060 23735507 -116581258 - L1ME1 LINE L1 -2060 4086 3609 363 278 163 4 chr10 23735520 23735790 -116580975 - L1ME1 LINE L1 -2697 3449 3137 2353 94 3 0 chr10 23735816 23736125 -116580640 - AluSp SINE Alu -3 310 1 1815 137 0 4 chr10 23736225 23736495 -116580270 + AluSg SINE Alu 37 305 -5 949 265 43 4 chr10 23736500 23736734 -116580031 + MIR SINE MIR 20 262 0 2437 79 0 0 chr10 23736982 23737287 -116579478 + AluY SINE Alu 1 305 -6 19636 48 0 3 chr10 23737335 23739883 -116576882 + L1P LINE L1 2 2543 -3603 6087 80 28 33 chr10 23739884 23741191 -116575574 + SVA Other Other 3 936 -450 2807 52 3 0 chr10 23741191 23741520 -116575245 + LTR5 LTR ERVK 1 330 -639 7319 88 22 20 chr10 23742112 23743180 -116573585 + MER11C LTR ERVK 1 1071 0 2107 106 3 10 chr10 23743572 23743864 -116572901 + AluSc SINE Alu 1 290 -19 2303 114 0 0 chr10 23744099 23744405 -116572360 + AluSx SINE Alu 1 306 -6 2173 155 85 19 chr10 23744406 23744889 -116571876 - L1MB8 LINE L1 -24 6154 5640 3727 166 65 55 chr10 23744889 23745792 -116570973 - MER21A LTR ERV1 -6 925 14 214 356 148 15 chr10 23745826 23745961 -116570804 + L2 LINE L2 3116 3268 -4 262 352 14 35 chr10 23746594 23746616 -116570149 - MIR3 SINE MIR -18 190 169 1990 106 29 0 chr10 23746616 23746939 -116569826 + AluSx SINE Alu 1 331 0 262 352 14 35 chr10 23746939 23747057 -116569708 - MIR3 SINE MIR -39 169 52 1470 124 22 9 chr10 23748085 23748311 -116568454 + MER30 DNA MER1_type 1 229 -1 277 158 35 35 chr10 23748468 23748525 -116568240 + L2 LINE L2 3214 3270 -2 3442 198 68 53 chr10 23749159 23749209 -116567556 - L1MB4 LINE L1 0 6180 6132 2096 137 0 9 chr10 23749209 23749524 -116567241 - AluSq SINE Alu -1 312 1 3442 198 68 53 chr10 23749524 23750413 -116566352 - L1MB4 LINE L1 -48 6132 5258 2193 110 3 3 chr10 23750413 23750713 -116566052 + AluSq SINE Alu 12 311 -2 3442 198 68 53 chr10 23750713 23750789 -116565976 - L1MB4 LINE L1 -922 5258 5185 866 165 0 0 chr10 23750789 23750916 -116565849 - FLAM_C SINE Alu -6 127 1 3442 198 68 53 chr10 23750916 23751611 -116565154 - L1MB4 LINE L1 -995 5185 4451 239 287 0 69 chr10 23751746 23751847 -116564918 - L1ME LINE L1 -285 5885 5792 1633 208 112 7 chr10 23751847 23752265 -116564500 - MLT1C LTR MaLR 0 467 6 557 259 77 33 chr10 23752285 23752559 -116564206 - L1ME LINE L1 -342 5779 5494 264 298 21 0 chr10 23752725 23752819 -116563946 - MIR SINE MIR -98 164 69 584 199 23 23 chr10 23753010 23753181 -116563584 - L1MC5 LINE L1 -39 7922 7752 238 341 0 8 chr10 23753217 23753343 -116563422 - L1MB4 LINE L1 -2409 3737 3613 1935 130 7 20 chr10 23753496 23753658 -116563107 - AluSx SINE Alu -16 296 138 2344 79 3 25 chr10 23753658 23753975 -116562790 - AluY SINE Alu 0 311 2 1935 130 7 20 chr10 23753975 23754112 -116562653 - AluSx SINE Alu -174 138 1 315 289 58 8 chr10 23754112 23754343 -116562422 - L1MEc LINE L1 -3861 2354 2150 434 330 107 12 chr10 23754699 23755277 -116561488 - HAL1 LINE L1 -785 1722 1090 329 280 79 37 chr10 23755339 23755528 -116561237 - L1MEc LINE L1 -5193 1012 816 313 282 161 0 chr10 23755697 23755821 -116560944 - L1MEc LINE L1 -5734 471 328 2453 83 0 0 chr10 23755969 23756270 -116560495 + AluY SINE Alu 1 301 -10 392 340 104 24 chr10 23756785 23757206 -116559559 + L2 LINE L2 2201 2655 -659 479 202 0 11 chr10 23757607 23757701 -116559064 + Tigger2 DNA MER2_type 2611 2703 -15 1294 104 0 0 chr10 23758095 23758258 -116558507 - AluSg/x SINE Alu -13 299 137 1261 143 196 14 chr10 23758511 23758791 -116557974 + MER44D DNA MER2_type 9 609 0 2305 106 3 6 chr10 23759409 23759720 -116557045 - AluSq SINE Alu -3 310 1 515 86 14 0 chr10 23760047 23760117 -116556648 - AluJ/FRAM SINE Alu -18 294 224 5314 146 9 1 chr10 23760124 23761004 -116555761 + Tigger1 DNA MER2_type 28 914 -1504 2065 85 4 0 chr10 23761077 23761336 -116555429 + AluSg SINE Alu 34 293 -17 1960 126 4 7 chr10 23762486 23762764 -116554001 + AluSx SINE Alu 4 280 -32 204 40 0 0 chr10 23762764 23762789 -116553976 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 596 106 11 53 chr10 23762791 23762885 -116553880 - FLAM_A SINE Alu -25 117 28 23 54 0 0 chr10 23763129 23763166 -116553599 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr10 23763545 23763578 -116553187 + AT_rich Low_complexity Low_complexity 1 33 0 276 100 0 0 chr10 23763829 23763869 -116552896 + (A)n Simple_repeat Simple_repeat 1 40 0 22820 33 7 6 chr10 23764306 23767865 -116548900 + L1PA4 LINE L1 2594 6155 0 185 298 0 0 chr10 23767926 23767973 -116548792 - L2 LINE L2 -705 2609 2563 207 311 132 33 chr10 23768100 23768312 -116548453 - L2 LINE L2 -932 2382 2150 415 226 83 45 chr10 23768462 23768595 -116548170 + L2 LINE L2 3175 3312 -1 2231 114 3 0 chr10 23768995 23769294 -116547471 - AluY SINE Alu -11 300 1 1847 142 3 42 chr10 23769345 23769461 -116547304 - AluSx SINE Alu -15 297 178 2244 152 22 0 chr10 23769461 23769817 -116546948 + THE1B LTR MaLR 1 364 0 1847 142 3 42 chr10 23769817 23770009 -116546756 - AluSx SINE Alu -134 178 1 1425 171 24 38 chr10 23770355 23770647 -116546118 + AluJb SINE Alu 1 288 -24 2033 104 57 0 chr10 23770959 23771238 -116545527 - AluSg SINE Alu -15 295 1 269 253 6 133 chr10 23771707 23771873 -116544892 + MIR SINE MIR 118 262 0 252 165 237 62 chr10 23772315 23772412 -116544353 - MIR SINE MIR -28 234 121 5314 149 34 26 chr10 23772903 23774150 -116542615 - L1MA4 LINE L1 0 6300 5048 1208 206 7 0 chr10 23774151 23774432 -116542333 + L1M4 LINE L1 2551 2833 -3313 1409 116 0 0 chr10 23774705 23774919 -116541846 - AluSc SINE Alu 0 311 98 2139 116 3 3 chr10 23775556 23775850 -116540915 + AluSx SINE Alu 1 294 -18 1477 178 56 86 chr10 23775964 23776408 -116540357 + MER63B DNA MER1_type 6 436 0 21 36 0 0 chr10 23777707 23777735 -116539030 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 23778221 23778243 -116538522 + AT_rich Low_complexity Low_complexity 1 22 0 1626 96 27 0 chr10 23778775 23778994 -116537771 - AluSg/x SINE Alu -2 308 84 244 326 87 33 chr10 23779613 23779705 -116537060 - MIR SINE MIR -137 125 29 229 178 133 0 chr10 23779849 23779894 -116536871 - L2 LINE L2 -5 3308 3258 570 226 35 31 chr10 23779895 23780090 -116536675 - L1ME LINE L1 -506 5615 5423 6293 199 48 39 chr10 23780094 23780456 -116536309 - L1MB5 LINE L1 0 6174 5817 288 0 0 0 chr10 23780456 23780488 -116536277 + (TG)n Simple_repeat Simple_repeat 2 33 0 2455 71 3 0 chr10 23780498 23780808 -116535957 - AluY SINE Alu 0 311 1 6293 199 48 39 chr10 23780808 23783026 -116533739 - L1MB5 LINE L1 -365 5809 3578 577 238 129 43 chr10 23783026 23783261 -116533504 - L1MB5 LINE L1 -2864 3282 3014 2279 112 0 10 chr10 23783261 23783574 -116533191 - AluSx SINE Alu -2 310 1 577 238 129 43 chr10 23783574 23783640 -116533125 - L1MB5 LINE L1 -3132 3014 2955 1108 190 7 84 chr10 23783740 23783968 -116532797 - Tigger1 DNA MER2_type -2156 262 59 2293 92 0 0 chr10 23783968 23784262 -116532503 + AluY SINE Alu 1 294 -17 1108 190 7 84 chr10 23784262 23784317 -116532448 - Tigger1 DNA MER2_type -2359 59 1 1662 186 0 0 chr10 23785068 23785347 -116531418 + AluSx SINE Alu 6 284 -28 468 0 0 0 chr10 23785347 23785399 -116531366 + (CA)n Simple_repeat Simple_repeat 2 53 0 2025 201 81 3 chr10 23785608 23785992 -116530773 - MER47B DNA MER2_type -3 415 2 265 270 145 20 chr10 23785998 23786150 -116530615 + L1MC/D LINE L1 4877 5047 -1099 478 289 74 42 chr10 23786336 23786648 -116530117 + L1MC/D LINE L1 5308 5629 -2179 208 147 0 0 chr10 23786677 23786711 -116530054 + (TATG)n Simple_repeat Simple_repeat 1 34 0 15309 177 38 14 chr10 23786973 23791000 -116525765 + L1PA13 LINE L1 1981 6113 -50 2329 148 52 2 chr10 23791113 23791519 -116525246 - MSTA LTR MaLR 0 428 3 6828 212 162 35 chr10 23791644 23792238 -116524527 + L1MDa LINE L1 94 611 -5929 2118 109 0 29 chr10 23792238 23792549 -116524216 + AluSx SINE Alu 6 307 -5 6828 212 162 35 chr10 23792549 23793013 -116523752 + L1MDa LINE L1 611 1014 -5526 2234 112 3 0 chr10 23793013 23793316 -116523449 + AluSx SINE Alu 1 304 -8 6828 212 162 35 chr10 23793316 23794452 -116522313 + L1MDa LINE L1 1014 2569 -3971 234 0 0 0 chr10 23794461 23794487 -116522278 + (CA)n Simple_repeat Simple_repeat 2 27 0 4303 252 40 41 chr10 23794541 23795449 -116521316 + L1MDa LINE L1 2486 3393 -3147 1973 139 10 3 chr10 23795449 23795752 -116521013 + AluSx SINE Alu 1 305 -7 4303 252 40 41 chr10 23795752 23796393 -116520372 + L1MDa LINE L1 3393 4001 -2539 2044 140 0 7 chr10 23796393 23796693 -116520072 + AluSq SINE Alu 1 298 -15 4303 252 40 41 chr10 23796693 23796781 -116519984 + L1MDa LINE L1 4001 4088 -2452 1250 181 47 106 chr10 23796781 23797168 -116519597 + MLT1A1 LTR MaLR 2 365 0 7277 211 58 28 chr10 23797168 23798849 -116517916 + MLT1A1-int LTR MaLR 1 1731 -4 1131 185 41 123 chr10 23798861 23799251 -116517514 + MLT1A1 LTR MaLR 1 358 -7 1062 236 30 27 chr10 23799254 23799555 -116517210 + L1MDa LINE L1 4085 4386 -2154 718 147 147 12 chr10 23799567 23799834 -116516931 + MER1B DNA MER1_type 1 339 0 1906 233 29 14 chr10 23799841 23800403 -116516362 + L1MDa LINE L1 4398 4967 -1573 1276 165 169 0 chr10 23800408 23800656 -116516109 + Tigger3(Golem) DNA MER2_type 2 291 -2738 1302 130 0 74 chr10 23800656 23800887 -116515878 - AluSq SINE Alu -12 301 88 334 136 0 0 chr10 23800892 23800951 -116515814 + Tigger3(Golem) DNA MER2_type 282 340 -2689 3319 241 47 14 chr10 23800956 23801810 -116514955 + L1PA12 LINE L1 11 892 -6689 670 241 40 45 chr10 23801801 23802000 -116514765 - L1PA12 LINE L1 -6774 807 610 * 861 110 45 19 chr10 23802018 23802165 -116514600 - Tigger3(Golem) DNA MER2_type -325 2704 2551 2252 123 0 0 chr10 23802165 23802474 -116514291 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 23804056 23804083 -116512682 + AT_rich Low_complexity Low_complexity 1 27 0 1988 105 50 0 chr10 23804432 23804709 -116512056 - AluSx SINE Alu -21 291 1 25 31 0 0 chr10 23804908 23804940 -116511825 + AT_rich Low_complexity Low_complexity 1 32 0 2155 95 30 0 chr10 23805028 23805323 -116511442 - AluSq SINE Alu -9 304 1 298 267 218 0 chr10 23805683 23805784 -116510981 - L2 LINE L2 0 3272 3150 249 233 17 0 chr10 23805797 23805857 -116510908 + MLT1A1 LTR MaLR 1 61 -444 464 220 22 82 chr10 23805858 23806040 -116510725 - L2 LINE L2 -69 3244 3074 22 0 0 0 chr10 23806571 23806593 -116510172 + AT_rich Low_complexity Low_complexity 1 22 0 243 250 89 0 chr10 23807791 23807847 -116508918 + L2 LINE L2 3204 3264 -8 22 35 0 0 chr10 23809292 23809321 -116507444 + AT_rich Low_complexity Low_complexity 1 29 0 751 172 0 0 chr10 23810962 23811084 -116505681 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr10 23811087 23811110 -116505655 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2541 49 13 0 chr10 23811312 23811616 -116505149 + AluY SINE Alu 1 308 -3 23 54 0 0 chr10 23812097 23812134 -116504631 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 23813476 23813497 -116503268 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 23817115 23817138 -116499627 + AT_rich Low_complexity Low_complexity 1 23 0 24 100 0 0 chr10 23818990 23819070 -116497695 + AT_rich Low_complexity Low_complexity 1 80 0 1711 150 0 62 chr10 23819992 23820298 -116496467 - AluJo SINE Alu -25 287 1 248 296 0 0 chr10 23820300 23820354 -116496411 - Tigger3(Golem) DNA MER2_type -2975 54 1 2394 209 28 4 chr10 23820408 23820944 -116495821 + L1MB7 LINE L1 5627 6175 -9 1603 168 66 0 chr10 23820964 23821238 -116495527 - AluJb SINE Alu -20 292 1 515 212 49 108 chr10 23822512 23822715 -116494050 - MER112 DNA MER1_type -12 248 58 1986 122 11 0 chr10 23824975 23825261 -116491504 - AluSx SINE Alu -23 289 1 1792 152 10 21 chr10 23827041 23827331 -116489434 + AluJb SINE Alu 1 287 -25 381 179 0 0 chr10 23827267 23827334 -116489431 + AluJ/FRAM SINE Alu 224 290 -12 458 237 59 30 chr10 23827393 23827562 -116489203 + L1M4 LINE L1 5 178 -6364 330 261 152 43 chr10 23827630 23827768 -116488997 + L1M4 LINE L1 330 482 -6060 667 102 213 0 chr10 23827778 23827886 -116488879 - AluJb SINE Alu -181 131 1 625 93 187 13 chr10 23827973 23828123 -116488642 + Tigger3(Golem) DNA MER2_type 2385 2560 -469 1049 76 0 182 chr10 23828130 23828366 -116488399 + 7SK RNA RNA 1 193 0 4149 221 56 43 chr10 23828366 23828668 -116488097 + L1M4 LINE L1 541 838 -5808 6358 120 88 22 chr10 23828668 23829820 -116486945 + Tigger3b DNA MER2_type 2 1230 -1 4149 221 56 43 chr10 23829820 23831021 -116485744 + L1M4 LINE L1 838 2081 -4565 1829 139 91 15 chr10 23831021 23831360 -116485405 + MLT1A1 LTR MaLR 1 365 0 4149 221 56 43 chr10 23831360 23832004 -116484761 + L1M4 LINE L1 2081 2715 -3931 701 215 56 0 chr10 23832007 23832151 -116484614 - MER6 DNA MER2_type 0 865 -7 2684 211 47 16 chr10 23832194 23832895 -116483870 + L1M4 LINE L1 2718 3440 -3204 331 214 65 78 chr10 23833224 23833378 -116483387 + L1M4 LINE L1 3418 3569 -3075 22 0 0 0 chr10 23833446 23833468 -116483297 + AT_rich Low_complexity Low_complexity 1 22 0 1166 195 28 0 chr10 23833469 23833684 -116483081 - MER58A DNA MER1_type 0 224 4 2165 94 0 3 chr10 23833860 23834175 -116482590 - AluSc SINE Alu 0 309 1 1733 137 63 19 chr10 23834395 23834761 -116482004 + Tigger3(Golem) DNA MER2_type 1 3028 -1 180 0 0 0 chr10 23834930 23834950 -116481815 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 23835124 23835145 -116481620 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 23835201 23835229 -116481536 + AT_rich Low_complexity Low_complexity 1 28 0 2422 47 0 56 chr10 23835956 23836278 -116480487 + AluY SINE Alu 1 304 -7 207 0 0 0 chr10 23837809 23837832 -116478933 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 233 247 129 41 chr10 23838273 23838443 -116478322 - L1MC/D LINE L1 -1961 5847 5663 292 254 254 0 chr10 23838521 23838643 -116478122 - MER112 DNA MER1_type -96 164 12 261 200 67 83 chr10 23838707 23838827 -116477938 - L1P3 LINE L1 -512 5660 5543 2194 107 7 0 chr10 23839018 23839327 -116477438 - AluSx SINE Alu -1 311 1 195 129 0 0 chr10 23839380 23839411 -116477354 + (T)n Simple_repeat Simple_repeat 1 31 0 294 330 160 15 chr10 23839744 23839950 -116476815 - L3 LINE CR1 -92 1485 1250 1133 192 64 0 chr10 23840823 23841057 -116475708 + MER5C DNA MER1_type 1 249 -75 676 181 0 45 chr10 23842086 23842241 -116474524 + L1MA9 LINE L1 6156 6303 -9 1628 231 132 14 chr10 23843404 23843905 -116472860 - HsTC2 DNA Tc2 -22 1876 1317 2188 120 0 7 chr10 23843905 23844206 -116472559 - AluSx SINE Alu -11 301 3 280 274 0 118 chr10 23844243 23844338 -116472427 - HsTC2 DNA Tc2 -1751 147 71 2410 75 0 10 chr10 23844338 23844643 -116472122 + AluY SINE Alu 1 302 -9 280 274 0 118 chr10 23844643 23844682 -116472083 - HsTC2 DNA Tc2 -1827 71 29 394 292 139 0 chr10 23844734 23844878 -116471887 + MIR SINE MIR 75 238 -24 252 283 62 26 chr10 23845203 23845316 -116471449 + MLT1J1 LTR MaLR 59 175 -271 454 226 29 29 chr10 23845417 23845554 -116471211 + MLT1J LTR MaLR 374 510 -1 483 170 19 38 chr10 23845646 23845752 -116471013 + L1MC4a LINE L1 6731 6834 -974 * 1294 223 94 12 chr10 23845750 23846091 -116470674 + L1ME1 LINE L1 5794 6162 -4 210 143 0 0 chr10 23846117 23846152 -116470613 + (A)n Simple_repeat Simple_repeat 1 35 0 2136 122 0 6 chr10 23846161 23846473 -116470292 + AluSq SINE Alu 1 310 -3 3098 219 121 15 chr10 23846481 23847208 -116469557 + L1MC4a LINE L1 6849 7684 -124 3203 126 76 2 chr10 23847208 23847724 -116469041 - MER41C LTR ERV1 0 554 1 3098 219 121 15 chr10 23847724 23847864 -116468901 + L1MC4a LINE L1 7684 7808 0 422 249 57 57 chr10 23847881 23848126 -116468639 + L1MEd LINE L1 960 1204 -4915 232 325 93 38 chr10 23848181 23848418 -116468347 + HAL1 LINE L1 1413 1662 -845 1831 149 17 7 chr10 23848639 23848941 -116467824 + AluJb SINE Alu 3 307 -5 300 232 58 32 chr10 23849349 23849504 -116467261 + L1MEd LINE L1 2114 2272 -3857 1848 129 7 7 chr10 23849612 23849907 -116466858 - MER41-int LTR ERV1 -2456 3490 3196 1326 136 0 76 chr10 23850438 23850688 -116466077 + AluJb SINE Alu 74 304 -8 1600 259 72 2 chr10 23850848 23851353 -116465412 - L2 LINE L2 0 3313 2776 4823 155 24 17 chr10 23851397 23852232 -116464533 - L1MB4 LINE L1 -12 6168 5323 562 67 0 44 chr10 23852232 23852322 -116464443 - L1PA8 LINE L1 -6 6166 6081 4823 155 24 17 chr10 23852322 23852443 -116464322 - L1MB4 LINE L1 -857 5323 5204 1094 201 96 12 chr10 23852449 23852698 -116464067 - AluJb SINE Alu -22 290 21 250 242 50 8 chr10 23852738 23852858 -116463907 - L1M4c LINE L1 -4041 2343 2219 288 200 15 0 chr10 23852879 23852944 -116463821 + L1M4c LINE L1 2135 2200 -4184 1132 217 104 41 chr10 23852945 23853263 -116463502 - L2 LINE L2 -534 2780 2443 2059 130 16 0 chr10 23853334 23853641 -116463124 - AluSx SINE Alu 0 312 1 2054 136 0 10 chr10 23853722 23854023 -116462742 + AluSx SINE Alu 1 298 -14 658 142 0 99 chr10 23854387 23854424 -116462341 + L1MB7 LINE L1 5915 5954 -230 2208 87 7 0 chr10 23854424 23854724 -116462041 + AluY SINE Alu 1 302 -9 658 142 0 99 chr10 23854724 23854736 -116462029 + L1MB7 LINE L1 5954 5966 -218 658 196 40 0 chr10 23854736 23854884 -116461881 + L1MB7 LINE L1 6022 6175 -9 2251 82 17 0 chr10 23855960 23856252 -116460513 + AluSg SINE Alu 1 297 -13 297 0 0 0 chr10 23856295 23856328 -116460437 + (TG)n Simple_repeat Simple_repeat 2 34 0 468 214 84 65 chr10 23856359 23856513 -116460252 - L2 LINE L2 -597 2717 2561 379 202 16 0 chr10 23856516 23856640 -116460125 + (TA)n Simple_repeat Simple_repeat 1 126 0 1813 198 32 11 chr10 23856757 23857131 -116459634 + MSTD LTR MaLR 4 385 -11 689 140 118 38 chr10 23857428 23857614 -116459151 + L1MA8 LINE L1 6088 6288 -3 1126 129 60 51 chr10 23857982 23858199 -116458566 + MER20 DNA MER1_type 1 219 0 779 216 100 29 chr10 23858202 23858443 -116458322 + MIR SINE MIR 5 262 0 285 98 0 0 chr10 23859285 23859326 -116457439 + (T)n Simple_repeat Simple_repeat 1 41 0 8686 94 4 3 chr10 23959532 23960719 -116356046 + L1PA7 LINE L1 365 1552 -4594 * 40646 55 46 2 chr10 23960700 23966193 -116350572 + L1P1 LINE L1 1 5740 -415 4835 91 6 1 chr10 23966302 23966953 -116349812 + L1PA2 LINE L1 5500 6153 -2 26967 69 47 1 chr10 23966973 23971147 -116345618 + L1PA7 LINE L1 1522 5892 -262 2099 91 3 18 chr10 23971301 23971586 -116345179 + L1PA7 LINE L1 5870 6150 -4 1884 155 7 3 chr10 23971802 23972099 -116344666 + AluJb SINE Alu 1 298 -14 240 220 0 20 chr10 23972275 23972325 -116344440 + L2 LINE L2 3244 3292 -21 215 289 26 13 chr10 23973107 23973183 -116343582 - L2 LINE L2 0 3272 3196 487 329 56 9 chr10 23973201 23973417 -116343348 + MLT1J LTR MaLR 286 511 0 1675 167 0 16 chr10 23974423 23974734 -116342031 - L1P LINE L1 -5840 306 1 430 261 49 20 chr10 23974825 23975028 -116341737 - L1ME4a LINE L1 -169 5952 5744 717 180 58 58 chr10 23975233 23975422 -116341343 - MER53 DNA DNA 0 189 1 369 216 155 26 chr10 23975450 23975566 -116341199 - L1ME4a LINE L1 -603 5518 5388 965 321 70 40 chr10 23976026 23976608 -116340157 + L2 LINE L2 2267 2866 -448 1747 168 0 7 chr10 23977861 23978153 -116338612 + AluJo SINE Alu 17 306 -6 1639 148 0 72 chr10 23978417 23978722 -116338043 + AluJo SINE Alu 2 284 -28 609 264 22 48 chr10 23978863 23979094 -116337671 + AluJo SINE Alu 2 226 -86 402 94 0 0 chr10 23979661 23979714 -116337051 - Alu SINE Alu -25 287 235 226 113 16 145 chr10 23980169 23980231 -116336534 - MER20B DNA MER1_type -653 130 77 816 152 0 43 chr10 23980599 23980737 -116336028 - FLAM_C SINE Alu -1 132 1 2043 143 0 6 chr10 23981777 23982091 -116334674 - AluSx SINE Alu 0 312 1 646 175 42 0 chr10 23982155 23982275 -116334490 - L1MA5A LINE L1 -1 6296 6172 1880 148 24 7 chr10 23982275 23982565 -116334200 - AluJb SINE Alu -7 305 11 1262 113 90 143 chr10 23982568 23982869 -116333896 + LTR12 LTR ERV1 1 285 -429 342 214 11 0 chr10 23982870 23982959 -116333806 + LTR30 LTR ERV1 553 642 -80 707 155 18 22 chr10 23982959 23983099 -116333666 + LTR12 LTR ERV1 300 584 -130 * 27632 112 13 16 chr10 23983081 23987909 -116328856 + HERV9 LTR ERV1 54 4953 -3446 4964 111 48 14 chr10 23987886 23988842 -116327923 + HERV9 LTR ERV1 709 1740 -5156 * 5294 119 11 4 chr10 23988852 23989617 -116327148 + HERV9 LTR ERV1 7630 8399 0 1042 132 7 19 chr10 23989807 23989997 -116326768 + LTR12 LTR ERV1 72 1984 -454 345 142 52 164 chr10 23989968 23990102 -116326663 + LTR12 LTR ERV1 159 277 -437 * 330 263 10 0 chr10 23990102 23990201 -116326564 + LTR30 LTR ERV1 544 643 -79 745 99 0 0 chr10 23990202 23990303 -116326462 + LTR12 LTR ERV1 481 581 -133 2756 108 69 77 chr10 23990311 23990819 -116325946 - L1MA5A LINE L1 -121 6176 5673 287 330 26 36 chr10 23991194 23991388 -116325377 + L2 LINE L2 2552 2743 -571 2370 96 0 0 chr10 23991394 23991697 -116325068 + AluY SINE Alu 1 303 -8 1102 285 38 12 chr10 23991773 23992173 -116324592 - L1M4 LINE L1 -1805 4405 3996 22 35 0 0 chr10 23992202 23992231 -116324534 + AT_rich Low_complexity Low_complexity 1 29 0 1412 204 20 30 chr10 23992369 23992668 -116324097 - AluJo SINE Alu -16 296 1 3540 165 47 45 chr10 23992669 23993862 -116322903 - L1MA9 LINE L1 -346 5966 4757 * 4549 142 29 31 chr10 23993856 23993964 -116322801 - L1MA9 LINE L1 -1622 4524 4417 1620 173 48 7 chr10 23993964 23994264 -116322501 + AluJo SINE Alu 1 311 0 4549 142 29 31 chr10 23994264 23994994 -116321771 - L1MA9 LINE L1 -1729 4417 3687 2407 244 82 28 chr10 23994993 23995677 -116321088 - L1M4 LINE L1 -5420 721 1 * 198 0 0 0 chr10 23996084 23996106 -116320659 + (ATG)n Simple_repeat Simple_repeat 3 24 0 6166 119 11 5 chr10 23996941 23998167 -116318598 + L1PA16 LINE L1 4901 6149 -17 2437 101 0 0 chr10 23999099 23999407 -116317358 + AluSx SINE Alu 3 310 -2 2290 145 17 9 chr10 23999424 23999768 -116316997 - MER7A DNA MER2_type 0 346 2 294 125 0 0 chr10 24000188 24000236 -116316529 + (CAT)n Simple_repeat Simple_repeat 3 50 0 282 333 9 9 chr10 24000254 24000362 -116316403 - MIR SINE MIR -14 248 141 461 145 0 0 chr10 24000362 24000424 -116316341 - Alu SINE Alu -17 295 234 245 208 0 0 chr10 24000529 24000582 -116316183 + AluJ/monomer SINE Alu 241 293 -9 4870 137 51 20 chr10 24000582 24000765 -116316000 + L1MA8 LINE L1 5422 5598 -693 2252 55 0 98 chr10 24000765 24001093 -116315672 + AluY SINE Alu 1 296 -15 4870 137 51 20 chr10 24001093 24001749 -116315016 + L1MA8 LINE L1 5598 6287 -4 2542 176 44 0 chr10 24001903 24002311 -116314454 + MSTB LTR MaLR 1 426 0 22 35 0 0 chr10 24002363 24002392 -116314373 + AT_rich Low_complexity Low_complexity 1 29 0 297 309 21 0 chr10 24002728 24002822 -116313943 - L2 LINE L2 0 3313 3218 2094 189 48 17 chr10 24003154 24003567 -116313198 - MSTB LTR MaLR 0 426 1 249 276 133 0 chr10 24004000 24004098 -116312667 - MIR SINE MIR -56 206 96 2229 181 67 31 chr10 24004372 24004892 -116311873 + LTR55 LTR ERV 1 539 -9 1098 167 0 0 chr10 24004971 24005133 -116311632 - FRAM SINE Alu -4 162 1 192 324 108 22 chr10 24005809 24005948 -116310817 + L2 LINE L2 3121 3271 -1 419 278 226 39 chr10 24006123 24006429 -116310336 - L2 LINE L2 -994 2320 1958 2054 121 197 0 chr10 24006659 24007015 -116309750 - MSTA LTR MaLR -2 426 1 323 260 239 28 chr10 24007015 24007300 -116309465 - L2 LINE L2 -1389 1925 1581 209 33 33 0 chr10 24007409 24007439 -116309326 + (TTA)n Simple_repeat Simple_repeat 3 33 0 411 288 159 41 chr10 24007487 24007827 -116308938 - HAL1 LINE L1 -813 1694 1315 2287 101 7 0 chr10 24008005 24008303 -116308462 + AluSx SINE Alu 3 302 -10 27 0 0 0 chr10 24011078 24011105 -116305660 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 24011188 24011216 -116305549 + AT_rich Low_complexity Low_complexity 1 28 0 1954 140 17 0 chr10 24011316 24011609 -116305156 - AluSq SINE Alu -15 298 1 570 244 141 40 chr10 24011618 24011908 -116304857 - L1ME3 LINE L1 -2 6160 5841 37930 90 7 13 chr10 24011908 24018118 -116298647 + L1PA6 LINE L1 11 6181 0 731 197 122 0 chr10 24018132 24018320 -116298445 - L1ME3 LINE L1 -324 5838 5628 1673 280 79 34 chr10 24018326 24019208 -116297557 - L1ME3 LINE L1 -1032 5114 4193 1058 252 47 38 chr10 24019208 24019526 -116297239 - LTR40b LTR ERVL 0 462 142 1810 166 3 16 chr10 24020110 24020417 -116296348 - AluJo SINE Alu -9 303 1 1709 184 20 0 chr10 24021957 24022256 -116294509 - AluJo SINE Alu -7 305 1 4221 193 79 28 chr10 24023004 24023729 -116293036 + L1MCb LINE L1 4 690 -5874 2397 96 0 0 chr10 24023729 24024032 -116292733 + AluSc SINE Alu 1 303 -6 4221 193 79 28 chr10 24024032 24024584 -116292181 + L1MCb LINE L1 690 1212 -5352 2805 99 6 3 chr10 24024584 24024947 -116291818 - THE1B LTR MaLR 0 364 1 4221 193 79 28 chr10 24024947 24025394 -116291371 + L1MCb LINE L1 1212 1802 -4762 2414 162 23 39 chr10 24025869 24026122 -116290643 - MSTB LTR MaLR 0 426 180 2107 119 0 7 chr10 24026122 24026428 -116290337 + AluSx SINE Alu 2 305 0 2414 162 23 39 chr10 24026428 24026606 -116290159 - MSTB LTR MaLR -246 180 1 204 40 0 0 chr10 24027027 24027052 -116289713 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2116 136 3 7 chr10 24028036 24028346 -116288419 + AluJo SINE Alu 1 309 -3 515 174 9 43 chr10 24028457 24028572 -116288193 - MER74B LTR ERVL -511 111 1 464 297 115 70 chr10 24028849 24029206 -116287559 - L2 LINE L2 -10 3262 2890 214 150 25 0 chr10 24029982 24030022 -116286743 - L2 LINE L2 -5 3308 3268 195 317 37 49 chr10 24030178 24030342 -116286423 - L2 LINE L2 -410 2904 2743 1557 180 3 27 chr10 24030356 24030650 -116286115 - AluJo SINE Alu -25 287 1 23 0 0 0 chr10 24030675 24030698 -116286067 + AT_rich Low_complexity Low_complexity 1 23 0 19745 84 9 1 chr10 24030698 24034347 -116282418 - L1PA7 LINE L1 -8 6146 2473 728 226 132 23 chr10 24034808 24035065 -116281700 + MER87 LTR ERV1 257 541 0 1394 228 58 17 chr10 24035072 24035485 -116281280 + MER74B LTR ERVL 183 612 -10 222 246 0 15 chr10 24036412 24036477 -116280288 + (TATAA)n Simple_repeat Simple_repeat 2 65 0 25 51 0 0 chr10 24036541 24036580 -116280185 + AT_rich Low_complexity Low_complexity 1 39 0 802 294 63 44 chr10 24037084 24037451 -116279314 - L2 LINE L2 -8 3305 2932 4012 232 50 23 chr10 24037519 24037852 -116278913 + L1 LINE L1 2639 2962 -3184 2260 104 0 0 chr10 24037852 24038150 -116278615 + AluY SINE Alu 1 298 -13 4012 232 50 23 chr10 24038150 24038285 -116278480 + L1 LINE L1 2962 3092 -3054 2212 126 10 0 chr10 24038285 24038595 -116278170 + AluSq SINE Alu 1 313 0 4012 232 50 23 chr10 24038595 24039458 -116277307 + L1 LINE L1 3092 4007 -2139 1062 227 60 25 chr10 24039457 24039810 -116276955 - L1M4 LINE L1 -3114 3032 2668 * 340 315 56 5 chr10 24039850 24040066 -116276699 - L1M4 LINE L1 -2205 3941 3715 1850 165 7 4 chr10 24040572 24040851 -116275914 - AluJo SINE Alu -27 285 6 563 238 46 65 chr10 24041005 24041424 -116275341 + L1MC5 LINE L1 6499 6900 -908 10992 121 24 53 chr10 24041428 24044079 -116272686 + L1P3 LINE L1 5 2672 -3789 324 279 93 19 chr10 24044181 24044342 -116272423 - L1M4 LINE L1 -2460 3686 3514 761 246 126 85 chr10 24044779 24044882 -116271883 - HAL1b LINE L1 -438 910 813 2427 111 0 0 chr10 24044882 24045234 -116271531 - L1PA13 LINE L1 -1 6162 5811 761 246 126 85 chr10 24045234 24045622 -116271143 - HAL1b LINE L1 -535 813 371 1770 188 0 0 chr10 24045622 24045910 -116270855 + AluJb SINE Alu 1 288 -24 761 246 126 85 chr10 24045910 24046219 -116270546 - HAL1b LINE L1 -977 371 76 1079 280 52 3 chr10 24046386 24046693 -116270072 - LTR16C LTR ERVL -23 468 147 2269 88 7 0 chr10 24046787 24047084 -116269681 + AluSc SINE Alu 1 299 -10 917 211 57 0 chr10 24047213 24047497 -116269268 + MER33 DNA MER1_type 1 292 -32 717 273 45 15 chr10 24047738 24048181 -116268584 + L1ME1 LINE L1 1055 1489 -4895 685 169 101 20 chr10 24048183 24048331 -116268434 - MER6B DNA MER2_type -5 205 46 966 228 54 93 chr10 24048334 24048873 -116267892 + L1ME1 LINE L1 1897 2414 -4149 985 160 4 22 chr10 24048888 24049117 -116267648 - MER1B DNA MER1_type -61 278 1 1337 257 51 34 chr10 24049120 24049770 -116266995 + L1ME1 LINE L1 2398 3058 -3324 * 1542 201 19 50 chr10 24049763 24050185 -116266580 + L1MB8 LINE L1 5769 6177 -1 * 6098 223 77 41 chr10 24050177 24050792 -116265973 + L1ME1 LINE L1 3047 3639 -2763 2549 74 3 0 chr10 24050792 24051101 -116265664 + AluY SINE Alu 1 310 -1 6098 223 77 41 chr10 24051101 24052394 -116264371 + L1ME1 LINE L1 3639 4884 -1518 2339 129 73 22 chr10 24052394 24052805 -116263960 + MSTB1 LTR MaLR 1 432 0 6098 223 77 41 chr10 24052805 24054133 -116262632 + L1ME1 LINE L1 4884 6397 -5 201 272 12 99 chr10 24054896 24054977 -116261788 - L2 LINE L2 -11 3302 3229 * 559 373 150 4 chr10 24054942 24055494 -116261271 + L2 LINE L2 265 897 -2417 245 222 16 16 chr10 24055513 24055576 -116261189 + CT-rich Low_complexity Low_complexity 2 64 0 579 346 82 16 chr10 24055881 24056316 -116260449 + L2 LINE L2 2537 3006 -266 1673 141 86 7 chr10 24056378 24056647 -116260118 - AluJo SINE Alu -22 290 1 1944 139 3 7 chr10 24057242 24057537 -116259228 - AluJo SINE Alu -18 294 1 366 307 23 47 chr10 24058105 24058320 -116258445 + MER63A DNA MER1_type 1 210 0 2030 173 45 47 chr10 24059519 24059534 -116257231 + MER74A LTR ERVL 1 15 -543 1633 194 7 0 chr10 24059534 24059823 -116256942 - AluJb SINE Alu -19 293 3 2030 173 45 47 chr10 24059823 24060293 -116256472 + MER74A LTR ERVL 15 485 -73 221 227 0 0 chr10 24060366 24060410 -116256355 + L2 LINE L2 3268 3311 -2 2108 120 30 0 chr10 24060759 24061059 -116255706 + AluSx SINE Alu 1 309 -3 2284 59 40 16 chr10 24061458 24061761 -116255004 + AluY SINE Alu 1 310 -1 190 273 23 0 chr10 24061947 24061991 -116254774 - MIR SINE MIR -131 77 33 655 198 43 0 chr10 24062677 24062793 -116253972 + FLAM_A SINE Alu 1 121 -12 29 47 0 0 chr10 24062793 24062836 -116253929 + AT_rich Low_complexity Low_complexity 1 43 0 563 83 28 9 chr10 24063841 24063950 -116252815 + (CA)n Simple_repeat Simple_repeat 1 111 0 39 50 0 0 chr10 24064350 24064410 -116252355 + AT_rich Low_complexity Low_complexity 1 60 0 1694 174 39 7 chr10 24064429 24064711 -116252054 + AluJb SINE Alu 1 291 -21 3562 196 1 1 chr10 24064730 24065499 -116251266 - L1PB1 LINE L1 -2026 4120 3352 3084 213 13 0 chr10 24065495 24066205 -116250560 + L1PB1 LINE L1 4116 4834 -1312 * 6158 79 4 42 chr10 24066441 24067319 -116249446 + L1PB1 LINE L1 4910 5740 -411 261 0 0 0 chr10 24067319 24067348 -116249417 + (TG)n Simple_repeat Simple_repeat 2 30 0 6158 79 4 42 chr10 24067348 24067741 -116249024 + L1PB1 LINE L1 5740 6146 -5 2454 73 0 0 chr10 24067810 24068112 -116248653 + AluY SINE Alu 1 302 -9 1759 172 0 21 chr10 24068460 24068745 -116248020 - AluJo SINE Alu -33 279 1 431 196 18 62 chr10 24068745 24068857 -116247908 - MIR SINE MIR -47 215 109 21 0 0 0 chr10 24069922 24069943 -116246822 + AT_rich Low_complexity Low_complexity 1 21 0 378 128 13 39 chr10 24070483 24070561 -116246204 - L1PA16 LINE L1 0 6166 6091 428 294 12 12 chr10 24070956 24071116 -116245649 - LTR16A LTR ERVL -89 361 202 316 269 39 0 chr10 24071168 24071272 -116245493 - LTR16A LTR ERVL -340 110 3 21 0 0 0 chr10 24071513 24071534 -116245231 + AT_rich Low_complexity Low_complexity 1 21 0 2775 143 31 44 chr10 24072014 24072650 -116244115 + L1M3 LINE L1 4803 5440 -728 1979 111 7 0 chr10 24072650 24072920 -116243845 + AluSx SINE Alu 1 272 -40 1669 224 28 71 chr10 24073549 24074115 -116242650 - MER34 LTR ERV1 0 542 1 26 64 0 0 chr10 24074212 24074259 -116242506 + AT_rich Low_complexity Low_complexity 1 47 0 1369 182 0 45 chr10 24074505 24074774 -116241991 - AluJo SINE Alu -19 293 37 519 175 77 108 chr10 24076484 24076565 -116240200 + MER5A DNA MER1_type 2 84 -105 1937 130 65 3 chr10 24076565 24076858 -116239907 + AluJb SINE Alu 1 311 -1 519 175 77 108 chr10 24076858 24076970 -116239795 + MER5A DNA MER1_type 84 189 0 30 0 0 0 chr10 24077400 24077430 -116239335 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr10 24077470 24077511 -116239254 + AT_rich Low_complexity Low_complexity 1 41 0 811 155 0 0 chr10 24077720 24077836 -116238929 - FLAM_A SINE Alu -16 117 2 9201 154 131 54 chr10 24078351 24078682 -116238083 - L1MCa LINE L1 -3375 3051 2747 2172 112 7 0 chr10 24078682 24078977 -116237788 + AluSq SINE Alu 1 297 -16 9201 154 131 54 chr10 24078977 24079320 -116237445 - L1MCa LINE L1 -3679 2747 2432 1483 142 146 8 chr10 24079320 24079574 -116237191 - AluJb SINE Alu -11 301 13 9201 154 131 54 chr10 24079574 24079839 -116236926 - L1MCa LINE L1 -3994 2432 2189 2454 65 0 10 chr10 24079839 24080148 -116236617 + AluY SINE Alu 1 306 -5 9201 154 131 54 chr10 24080148 24080167 -116236598 - L1MCa LINE L1 -4237 2189 2173 2143 144 21 0 chr10 24080167 24080506 -116236259 - MER7A DNA MER2_type -1 345 2 9201 154 131 54 chr10 24080506 24080675 -116236090 - L1MCa LINE L1 -4253 2173 2018 1500 160 9 0 chr10 24080675 24080906 -116235859 - AluJb SINE Alu -7 305 73 9201 154 131 54 chr10 24080906 24082599 -116234166 - L1MCa LINE L1 -4408 2018 19 343 301 71 0 chr10 24082688 24082801 -116233964 + MIR SINE MIR 123 243 -19 21 0 0 0 chr10 24083046 24083067 -116233698 + AT_rich Low_complexity Low_complexity 1 21 0 2439 84 3 0 chr10 24084938 24085247 -116231518 + AluSx SINE Alu 1 310 -2 252 100 0 0 chr10 24085503 24085543 -116231222 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 1736 161 25 11 chr10 24085567 24085853 -116230912 - AluJo SINE Alu -22 290 1 229 269 137 6 chr10 24085892 24086067 -116230698 - HAL1 LINE L1 -220 2287 2090 771 264 109 48 chr10 24086127 24086567 -116230198 - HAL1 LINE L1 -2040 467 1 317 190 21 120 chr10 24088722 24088864 -116227901 + MIR SINE MIR 81 208 -54 246 253 13 13 chr10 24089851 24089926 -116226839 - MER20B DNA MER1_type 0 783 709 883 229 78 72 chr10 24090022 24090380 -116226385 - MLT1G1 LTR MaLR -173 393 43 922 133 265 9 chr10 24090393 24090604 -116226161 + AluSg SINE Alu 1 265 -45 262 226 19 0 chr10 24090614 24090667 -116226098 - MLT1G1 LTR MaLR -541 54 1 599 251 59 0 chr10 24090667 24090854 -116225911 - MER20B DNA MER1_type -69 714 517 26 30 0 0 chr10 24092556 24092589 -116224176 + AT_rich Low_complexity Low_complexity 1 33 0 448 228 22 60 chr10 24092756 24092940 -116223825 - MER96B DNA MER1_type? 0 417 241 1525 144 6 113 chr10 24093999 24094326 -116222439 - AluJb SINE Alu -10 292 1 1678 169 3 60 chr10 24095165 24095484 -116221281 + AluJo SINE Alu 1 301 -11 713 206 0 7 chr10 24095964 24096105 -116220660 + MER69A DNA AcHobo 36 175 -2 647 299 68 77 chr10 24096167 24096736 -116220029 + L1MB8 LINE L1 4489 5052 -1094 1077 171 0 11 chr10 24096785 24096966 -116219799 - AluJb SINE Alu 0 312 134 2734 191 7 17 chr10 24097220 24097811 -116218954 + L1MB8 LINE L1 5574 6158 -20 725 310 59 26 chr10 24097919 24098458 -116218307 + L1ME4a LINE L1 5355 5911 -210 234 0 0 0 chr10 24098763 24098789 -116217976 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 192 125 0 0 chr10 24099601 24099633 -116217132 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 1494 113 0 0 chr10 24099633 24099828 -116216937 - AluSg/x SINE Alu -18 292 98 1794 118 63 41 chr10 24100334 24100697 -116216068 - THE1C LTR MaLR 0 375 5 205 306 0 0 chr10 24100788 24100873 -116215892 + A-rich Low_complexity Low_complexity 1 85 0 833 295 55 37 chr10 24100941 24101321 -116215444 + LTR16A LTR ERVL 64 450 0 953 300 43 12 chr10 24101380 24101797 -116214968 + HERV16 LTR ERVL 59 488 -4508 1071 274 59 13 chr10 24102146 24102617 -116214148 + HERV16 LTR ERVL 933 1425 -3571 1309 189 51 31 chr10 24102776 24103030 -116213735 + AluJo SINE Alu 1 259 -53 198 0 0 0 chr10 24103031 24103053 -116213712 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 1361 181 4 0 chr10 24103400 24103632 -116213133 + AluJo SINE Alu 68 300 -12 327 210 0 25 chr10 24103646 24103727 -116213038 + MLT1H1 LTR MaLR 469 547 -8 1541 144 100 10 chr10 24104166 24104465 -116212300 - L1MC3 LINE L1 -354 7431 7106 814 112 30 37 chr10 24104500 24104634 -116212131 - FLAM_C SINE Alu 0 133 1 259 222 12 25 chr10 24104655 24104736 -116212029 - L1M4 LINE L1 -1305 4841 4762 4464 175 22 38 chr10 24104777 24106172 -116210593 - L1MB3 LINE L1 -2 6181 4810 869 196 6 0 chr10 24106186 24106359 -116210406 + MLT2B1 LTR ERVL 1 174 -346 519 227 162 7 chr10 24106362 24106516 -116210249 + MLT2B1 LTR ERVL 343 520 0 282 266 62 79 chr10 24106673 24107026 -116209739 - L1ME4a LINE L1 -125 5996 5650 1216 209 12 91 chr10 24107658 24108064 -116208701 + MLT1A2 LTR MaLR 1 374 0 186 43 0 0 chr10 24108574 24108597 -116208168 + (A)n Simple_repeat Simple_repeat 1 23 0 245 268 203 8 chr10 24108649 24108772 -116207993 + L1ME3A LINE L1 5999 6145 -25 428 129 0 0 chr10 24109848 24109910 -116206855 - AluJo SINE Alu -16 296 235 825 167 7 0 chr10 24109910 24110048 -116206717 - AluJo SINE Alu -163 149 11 372 278 112 16 chr10 24110779 24110966 -116205799 + MIR SINE MIR 20 224 -38 673 0 0 0 chr10 24112009 24112084 -116204681 - tRNA-Asn-AAC tRNA tRNA -2 75 1 21 0 0 0 chr10 24114550 24114571 -116202194 + AT_rich Low_complexity Low_complexity 1 21 0 2235 100 7 3 chr10 24114571 24114871 -116201894 + AluSq SINE Alu 1 301 -12 1902 160 0 25 chr10 24115195 24115514 -116201251 + AluJo SINE Alu 1 311 -1 21 57 0 0 chr10 24115531 24115566 -116201199 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 24115693 24115716 -116201049 + AT_rich Low_complexity Low_complexity 1 23 0 1598 189 35 0 chr10 24116573 24116693 -116200072 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr10 24116693 24116716 -116200049 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1598 189 35 0 chr10 24116716 24116880 -116199885 + AluJo SINE Alu 115 295 -17 1457 151 0 9 chr10 24117091 24117323 -116199442 + AluSg/x SINE Alu 79 308 -2 246 305 128 21 chr10 24118020 24118161 -116198604 - MIR SINE MIR -1 261 106 2459 93 0 0 chr10 24118599 24118911 -116197854 + AluSx SINE Alu 1 312 0 897 220 83 17 chr10 24119179 24119420 -116197345 - MIR SINE MIR -5 257 1 332 194 202 8 chr10 24119523 24119647 -116197118 - L1MC4 LINE L1 -5 8037 7890 5060 163 18 98 chr10 24119654 24119867 -116196898 - L1 LINE L1 -2362 3784 3555 2300 97 13 3 chr10 24119867 24120175 -116196590 - AluSq SINE Alu -1 312 2 5060 163 18 98 chr10 24120175 24121393 -116195372 - L1 LINE L1 -2591 3555 2469 1308 167 67 107 chr10 24121392 24121511 -116195254 - L1MC4 LINE L1 -143 7899 7777 * 1734 142 68 25 chr10 24121511 24121792 -116194973 - AluSx SINE Alu -19 293 1 1308 167 67 107 chr10 24121792 24122121 -116194644 - L1MC4 LINE L1 -265 7777 7469 31 0 0 0 chr10 24122325 24122356 -116194409 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 24123205 24123242 -116193523 + AT_rich Low_complexity Low_complexity 1 37 0 3362 186 64 28 chr10 24123616 24124964 -116191801 + L1MB7 LINE L1 4769 6167 -17 1796 166 0 46 chr10 24125171 24125315 -116191450 + AluJo SINE Alu 1 150 -162 1830 174 0 7 chr10 24125315 24125614 -116191151 + AluJb SINE Alu 1 297 -15 1796 166 0 46 chr10 24125614 24125794 -116190971 + AluJo SINE Alu 150 310 -2 210 256 23 0 chr10 24125924 24125967 -116190798 - L2 LINE L2 -10 3262 3219 209 270 79 22 chr10 24126344 24126433 -116190332 + L2 LINE L2 1891 1984 -1330 881 122 24 0 chr10 24126904 24127027 -116189738 + AluJo SINE Alu 11 136 -176 354 325 193 25 chr10 24127057 24127571 -116189194 + L2 LINE L2 2154 2753 -561 408 280 56 32 chr10 24127574 24127699 -116189066 + MER119 DNA MER1_type 1 128 -455 504 240 16 0 chr10 24127712 24127833 -116188932 + MER119 DNA MER1_type 461 583 0 1662 160 68 4 chr10 24128484 24128765 -116188000 + AluJo SINE Alu 1 299 -13 2214 92 7 7 chr10 24128781 24129076 -116187689 - AluSq SINE Alu -18 295 1 295 369 49 16 chr10 24129133 24129255 -116187510 + L2 LINE L2 3138 3263 -9 1372 78 6 11 chr10 24129559 24129739 -116187026 - AluSq SINE Alu -134 179 1 360 344 46 15 chr10 24129796 24129927 -116186838 + L2 LINE L2 3138 3272 0 275 286 0 33 chr10 24130066 24130157 -116186608 + MLT1L LTR MaLR 1 88 -527 236 320 80 29 chr10 24130208 24130383 -116186382 + MLT1L LTR MaLR 206 389 -226 2161 104 10 3 chr10 24131680 24131978 -116184787 + AluSq SINE Alu 1 300 -13 654 287 82 38 chr10 24132186 24132321 -116184444 - L1M4 LINE L1 -861 5285 5157 1562 164 122 3 chr10 24132321 24132632 -116184133 - MER7A DNA MER2_type 0 346 1 654 287 82 38 chr10 24132632 24132724 -116184041 - L1M4 LINE L1 -989 5157 5071 2209 98 0 29 chr10 24132724 24133030 -116183735 - AluSc SINE Alu -12 297 1 654 287 82 38 chr10 24133030 24133142 -116183623 - L1M4 LINE L1 -1075 5071 4930 207 0 0 0 chr10 24133991 24134014 -116182751 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 456 67 0 0 chr10 24134215 24134275 -116182490 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 1143 108 37 70 chr10 24138596 24138810 -116177955 - AluSq SINE Alu -104 209 3 194 400 0 0 chr10 24138914 24138999 -116177766 - MIR SINE MIR -130 132 48 2191 104 0 42 chr10 24139027 24139334 -116177431 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 24139593 24139874 -116176891 - AluSg SINE Alu -9 301 29 2354 79 0 3 chr10 24140583 24140886 -116175879 + AluY SINE Alu 1 302 -9 1380 115 103 33 chr10 24140887 24141130 -116175635 - MER51B LTR ERV1 -117 260 1 2282 263 83 34 chr10 24142021 24143167 -116173598 + L2 LINE L2 2111 3313 0 965 191 5 16 chr10 24143270 24143459 -116173306 - AluJo SINE Alu -7 305 119 219 293 17 0 chr10 24143460 24143518 -116173247 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 24143526 24143752 -116173013 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 24143977 24144286 -116172479 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 24144325 24144606 -116172159 + L1PA15 LINE L1 5888 6162 -3 1819 129 0 74 chr10 24147330 24147655 -116169110 - AluJo SINE Alu -10 302 2 570 311 138 73 chr10 24148529 24149158 -116167607 + L2 LINE L2 1893 2569 -745 2069 141 3 0 chr10 24149158 24149457 -116167308 - AluJo SINE Alu -12 300 1 570 311 138 73 chr10 24149457 24149495 -116167270 + L2 LINE L2 2569 2603 -711 827 230 49 49 chr10 24149568 24149833 -116166932 - L1ME3A LINE L1 0 6170 5906 391 282 53 121 chr10 24149836 24150032 -116166733 + L2 LINE L2 2708 2872 -441 1951 108 22 7 chr10 24150032 24150309 -116166456 - AluSx SINE Alu -13 299 19 391 282 53 121 chr10 24150309 24150518 -116166247 + L2 LINE L2 2872 3093 -220 1753 150 0 36 chr10 24150683 24150990 -116165775 + AluSx SINE Alu 1 296 -16 1636 186 4 0 chr10 24151192 24151471 -116165294 + AluJb SINE Alu 1 280 -32 713 69 0 10 chr10 24151471 24151572 -116165193 + (GGAA)n Simple_repeat Simple_repeat 2 101 0 1271 212 4 4 chr10 24152093 24152352 -116164413 - AluJo SINE Alu -53 259 1 322 54 54 0 chr10 24152765 24152821 -116163944 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1456 172 13 50 chr10 24152823 24153125 -116163640 + AluJo SINE Alu 1 291 -21 464 291 9 62 chr10 24153540 24153750 -116163015 + L2 LINE L2 2393 2591 -723 707 276 121 46 chr10 24153773 24154186 -116162579 - MLT1L LTR MaLR -8 607 164 2596 112 5 32 chr10 24154194 24154568 -116162197 + THE1B LTR MaLR 1 364 0 275 139 0 0 chr10 24154636 24154679 -116162086 + LTR67 LTR ERVL 97 139 -418 1792 142 3 70 chr10 24155730 24155872 -116160893 + AluJb SINE Alu 1 151 -161 1577 94 0 10 chr10 24155872 24156075 -116160690 + AluSg/x SINE Alu 96 296 -14 2223 111 0 0 chr10 24156076 24156364 -116160401 + AluSx SINE Alu 3 290 -22 225 0 0 0 chr10 24156371 24156396 -116160369 + (CA)n Simple_repeat Simple_repeat 2 26 0 1792 142 3 70 chr10 24156396 24156559 -116160206 + AluJb SINE Alu 157 295 -17 375 284 53 64 chr10 24157321 24157585 -116159180 + MARNA DNA Mariner 214 474 -112 1879 100 35 52 chr10 24157653 24157943 -116158822 + AluSg SINE Alu 1 285 -25 630 326 98 29 chr10 24157953 24158428 -116158337 + L2 LINE L2 2766 3271 -1 2275 114 0 0 chr10 24158754 24159053 -116157712 + AluSx SINE Alu 1 299 -13 428 312 144 0 chr10 24159176 24159378 -116157387 - MIR SINE MIR -1 261 31 1994 123 0 42 chr10 24159440 24159748 -116157017 + AluJo SINE Alu 6 300 -12 959 227 82 118 chr10 24159890 24160469 -116156296 - MLT1F1 LTR MaLR 0 567 1 891 165 0 25 chr10 24160476 24160634 -116156131 - FRAM SINE Alu -22 154 1 1857 117 75 0 chr10 24160751 24161032 -116155733 + AluSx SINE Alu 1 302 -10 282 29 0 0 chr10 24161196 24161231 -116155534 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 776 178 8 0 chr10 24161232 24161350 -116155415 - FLAM_C SINE Alu -23 120 2 1919 105 4 0 chr10 24161980 24162237 -116154528 - AluSc SINE Alu -51 258 1 22 0 0 0 chr10 24162567 24162589 -116154176 + AT_rich Low_complexity Low_complexity 1 22 0 1480 123 33 0 chr10 24162847 24163059 -116153706 - AluSg/x SINE Alu -8 302 84 1719 143 7 38 chr10 24163154 24163468 -116153297 + AluJb SINE Alu 1 305 0 2073 133 3 0 chr10 24163936 24164245 -116152520 + AluSx SINE Alu 1 310 -2 198 318 16 16 chr10 24164407 24164470 -116152295 - L2 LINE L2 0 3272 3210 2182 113 0 0 chr10 24165179 24165488 -116151277 + AluSx SINE Alu 1 309 0 245 174 0 0 chr10 24165493 24165539 -116151226 - L1 LINE L1 -1826 4320 4275 3154 212 17 11 chr10 24165606 24166313 -116150452 - L1 LINE L1 -1888 4258 3548 470 158 50 0 chr10 24166315 24166416 -116150349 - L1ME LINE L1 -725 5439 5334 1604 136 13 0 chr10 24166416 24166652 -116150113 + AluSx SINE Alu 1 239 -73 25 0 0 0 chr10 24166758 24166783 -116149982 + GC_rich Low_complexity Low_complexity 1 25 0 2152 105 3 3 chr10 24170376 24170670 -116146095 - AluSg SINE Alu -16 294 1 1196 250 58 96 chr10 24170670 24171082 -116145683 - L1ME LINE L1 -921 5225 4799 2410 76 0 0 chr10 24171082 24171384 -116145381 - AluY SINE Alu -9 302 1 1196 250 58 96 chr10 24171384 24171458 -116145307 - L1ME LINE L1 -1347 4799 4724 1898 107 0 46 chr10 24171458 24171738 -116145027 - AluSg1 SINE Alu -11 298 32 1196 250 58 96 chr10 24171738 24171917 -116144848 - L1ME LINE L1 -1422 4724 4584 351 0 0 0 chr10 24171941 24171980 -116144785 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 230 281 53 79 chr10 24172017 24172131 -116144634 - L2 LINE L2 -4 3268 3158 720 248 74 48 chr10 24172344 24172574 -116144191 - MIR SINE MIR -15 247 12 231 88 0 0 chr10 24172779 24172813 -116143952 + (TGG)n Simple_repeat Simple_repeat 2 35 0 336 248 77 33 chr10 24172891 24173014 -116143751 + ERVL LTR ERVL 1823 1998 -3039 759 288 24 71 chr10 24173066 24173261 -116143504 + L2 LINE L2 2992 3166 -147 2057 141 28 0 chr10 24173261 24173552 -116143213 - AluSx SINE Alu -13 299 1 759 288 24 71 chr10 24173552 24173693 -116143072 + L2 LINE L2 3166 3312 -1 1548 160 30 15 chr10 24173754 24174017 -116142748 - AluJo SINE Alu -41 271 5 329 263 121 68 chr10 24174070 24174370 -116142395 + ERVL LTR ERVL 2128 2439 -3046 1223 315 67 20 chr10 24174538 24174876 -116141889 + ERVL LTR ERVL 4757 5133 -631 1891 171 0 7 chr10 24174876 24175175 -116141590 - AluSx SINE Alu -14 298 2 1223 315 67 20 chr10 24175175 24175389 -116141376 + ERVL LTR ERVL 5133 5335 -429 523 160 90 10 chr10 24175433 24175533 -116141232 + FLAM_C SINE Alu 2 109 -34 216 0 0 0 chr10 24175538 24175562 -116141203 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 210 300 29 0 chr10 24175895 24175965 -116140800 + CT-rich Low_complexity Low_complexity 3 74 0 1968 183 93 56 chr10 24176455 24176860 -116139905 - MER63 DNA MER1_type 0 1060 631 2015 118 14 0 chr10 24176860 24177140 -116139625 + AluSx SINE Alu 1 284 -28 1968 183 93 56 chr10 24177140 24177238 -116139527 - MER63 DNA MER1_type -429 631 538 305 206 103 10 chr10 24177279 24177376 -116139389 + LTR67 LTR ERVL 452 557 0 1874 146 0 30 chr10 24177689 24177990 -116138775 - AluJo SINE Alu -20 292 1 243 237 0 51 chr10 24177990 24178049 -116138716 - L2 LINE L2 -12 3301 3246 21 0 0 0 chr10 24178268 24178289 -116138476 + AT_rich Low_complexity Low_complexity 1 21 0 609 211 0 17 chr10 24178289 24178655 -116138110 + (CATATA)n Simple_repeat Simple_repeat 1 359 0 304 303 11 0 chr10 24178696 24178785 -116137980 - L1MC4 LINE L1 -1339 6703 6614 * 342 264 11 0 chr10 24178715 24178802 -116137963 + L1MC4 LINE L1 6615 6702 -1340 1543 151 47 18 chr10 24178802 24179081 -116137684 - AluJo SINE Alu -25 287 1 347 247 44 70 chr10 24179138 24179195 -116137570 + MIR SINE MIR 31 88 -174 685 252 129 93 chr10 24179195 24179799 -116136966 - MLT2E LTR ERVL -2 626 1 347 247 44 70 chr10 24179799 24179899 -116136866 + MIR SINE MIR 88 184 -78 1682 200 0 3 chr10 24180058 24180348 -116136417 + AluJo SINE Alu 1 289 -23 671 222 32 11 chr10 24180680 24180865 -116135900 + MER53 DNA DNA 1 189 0 301 196 0 0 chr10 24181372 24181428 -116135337 + L1M4 LINE L1 5157 5212 -934 1115 221 82 7 chr10 24181432 24181735 -116135030 + L1ME1 LINE L1 3434 3759 -2387 865 124 0 8 chr10 24181735 24181856 -116134909 + AluJb SINE Alu 1 120 -192 5993 203 44 24 chr10 24181894 24182768 -116133997 + L1ME1 LINE L1 3760 4615 -1551 1618 141 96 4 chr10 24182768 24183038 -116133727 + AluSx SINE Alu 1 295 -17 5993 203 44 24 chr10 24183038 24184236 -116132529 + L1ME1 LINE L1 4615 5884 -282 2243 95 3 0 chr10 24184236 24184520 -116132245 + AluSp SINE Alu 1 309 0 217 0 0 0 chr10 24184520 24184544 -116132221 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 5993 203 44 24 chr10 24184544 24184800 -116131965 + L1ME1 LINE L1 5884 6133 -33 377 296 23 30 chr10 24185517 24185671 -116131094 - MIR SINE MIR -65 143 36 238 204 20 0 chr10 24185686 24185735 -116131030 - L2 LINE L2 -1 3312 3263 213 121 0 0 chr10 24187421 24187454 -116129311 + (A)n Simple_repeat Simple_repeat 1 33 0 2243 90 7 0 chr10 24188063 24188352 -116128413 - AluSc SINE Alu -18 291 1 205 225 0 28 chr10 24189124 24189195 -116127570 + CT-rich Low_complexity Low_complexity 3 71 0 1730 145 27 0 chr10 24190211 24190473 -116126292 + AluSx SINE Alu 44 312 0 23 33 0 0 chr10 24190566 24190596 -116126169 + AT_rich Low_complexity Low_complexity 1 30 0 927 82 0 8 chr10 24190659 24190781 -116125984 + AluSq/x SINE Alu 1 121 -191 218 31 0 31 chr10 24190781 24190813 -116125952 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 25 31 0 0 chr10 24192687 24192719 -116124046 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 24195423 24195453 -116121312 + AT_rich Low_complexity Low_complexity 1 30 0 200 86 29 0 chr10 24196033 24196068 -116120697 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 476 302 79 69 chr10 24197928 24198557 -116118208 - L2 LINE L2 0 3313 2597 2095 86 61 0 chr10 24199035 24199315 -116117450 + AluSx SINE Alu 1 297 -15 428 271 0 0 chr10 24199538 24199645 -116117120 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 24200161 24200182 -116116583 + AT_rich Low_complexity Low_complexity 1 21 0 502 205 98 0 chr10 24200586 24200698 -116116067 + MER91C DNA MER1_type 18 140 0 322 376 17 12 chr10 24200756 24200929 -116115836 + L2 LINE L2 2736 2909 -405 481 352 98 19 chr10 24201002 24201422 -116115343 + L2 LINE L2 2521 2973 -341 7585 27 8 0 chr10 24201890 24203121 -116113644 - L1PA3 LINE L1 0 6155 4921 628 257 137 13 chr10 24203150 24203376 -116113389 - MIR SINE MIR -7 255 2 864 182 0 25 chr10 24203705 24203864 -116112901 - AluSg/x SINE Alu -21 291 137 1033 95 19 0 chr10 24203864 24204022 -116112743 + L1MB4 LINE L1 6020 6180 0 335 118 106 24 chr10 24204113 24204198 -116112567 - L1PA16 LINE L1 0 6166 6075 21 0 0 0 chr10 24204583 24204604 -116112161 + AT_rich Low_complexity Low_complexity 1 21 0 527 157 222 0 chr10 24204680 24204788 -116111977 + FLAM_C SINE Alu 1 132 -1 216 0 0 0 chr10 24205195 24205219 -116111546 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1862 149 35 14 chr10 24205720 24206009 -116110756 + AluSx SINE Alu 1 295 -17 22 70 0 0 chr10 24206053 24206096 -116110669 + AT_rich Low_complexity Low_complexity 1 43 0 450 158 28 20 chr10 24206288 24206543 -116110222 + (TA)n Simple_repeat Simple_repeat 1 257 0 1575 173 50 20 chr10 24206765 24207065 -116109700 + AluJb SINE Alu 1 309 -3 1366 195 25 7 chr10 24207113 24207390 -116109375 + L1MB4 LINE L1 5310 5591 -589 547 174 15 8 chr10 24207390 24207501 -116109264 + L1MB4 LINE L1 6048 6180 0 235 61 30 0 chr10 24207981 24208014 -116108751 + U2 snRNA snRNA 1 34 -154 730 252 83 15 chr10 24208429 24208630 -116108135 + MIR SINE MIR 50 262 0 4707 155 21 15 chr10 24210025 24210889 -116105876 + L1MB5 LINE L1 5293 6161 -13 391 60 194 0 chr10 24213292 24213359 -116103406 + MADE1 DNA Mariner 1 80 0 835 245 45 25 chr10 24213836 24214081 -116102684 + MIR SINE MIR 2 251 -11 240 327 36 36 chr10 24214700 24214810 -116101955 - MIR SINE MIR -149 113 4 22 35 0 0 chr10 24214998 24215027 -116101738 + AT_rich Low_complexity Low_complexity 1 29 0 2324 89 3 0 chr10 24215565 24215857 -116100908 - AluSg SINE Alu -17 293 1 551 132 9 0 chr10 24216448 24216554 -116100211 + Tigger7 DNA MER2_type 2262 2368 -119 310 83 21 0 chr10 24216559 24216607 -116100158 - L1PB4 LINE L1 -8 6148 6100 230 282 56 0 chr10 24217186 24217257 -116099508 - MIR SINE MIR -71 137 63 251 91 200 0 chr10 24217760 24217815 -116098950 - L1MA8 LINE L1 -113 6178 6113 1800 170 0 27 chr10 24218794 24219094 -116097671 + AluJb SINE Alu 3 294 -18 2070 112 30 0 chr10 24219887 24220183 -116096582 - AluSq SINE Alu -8 305 1 472 220 0 8 chr10 24220294 24220412 -116096353 + Charlie5 DNA MER1_type 11 127 -2485 * 1646 154 67 16 chr10 24220408 24220779 -116095986 + Charlie5 DNA MER1_type 2233 2622 0 183 220 0 0 chr10 24220873 24220923 -116095842 + (CATA)n Simple_repeat Simple_repeat 2 51 0 201 244 0 0 chr10 24220923 24220964 -116095801 + (TG)n Simple_repeat Simple_repeat 1 41 0 1648 208 108 49 chr10 24220967 24221109 -116095656 + MLT1F LTR MaLR 1 133 -409 1568 158 79 0 chr10 24221109 24221387 -116095378 + AluJo SINE Alu 1 300 -12 1648 208 108 49 chr10 24221387 24221754 -116095011 + MLT1F LTR MaLR 133 540 -2 298 268 98 8 chr10 24221769 24221801 -116094964 + L1ME LINE L1 5691 5719 -402 198 0 0 0 chr10 24221801 24221823 -116094942 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 298 268 98 8 chr10 24221823 24221913 -116094852 + L1ME LINE L1 5719 5824 -297 193 196 98 0 chr10 24222129 24222180 -116094585 + L2 LINE L2 3167 3222 -91 38 22 0 0 chr10 24222268 24222313 -116094452 + AT_rich Low_complexity Low_complexity 1 45 0 2280 122 0 0 chr10 24222358 24222670 -116094095 - AluSx SINE Alu 0 312 1 321 125 0 0 chr10 24222673 24222721 -116094044 - L1PB4 LINE L1 -31 6125 6078 1183 200 200 69 chr10 24223594 24224070 -116092695 + MLT1F LTR MaLR 1 538 -4 1790 159 7 0 chr10 24224111 24224400 -116092365 - AluJo SINE Alu -21 291 1 1560 180 21 32 chr10 24224600 24224911 -116091854 - AluSx SINE Alu 0 310 3 495 196 87 139 chr10 24225548 24225820 -116090945 + Charlie8 DNA MER1_type 5 266 -2151 21 0 0 0 chr10 24226890 24226911 -116089854 + AT_rich Low_complexity Low_complexity 1 21 0 2327 97 0 3 chr10 24227666 24227966 -116088799 + AluSg1 SINE Alu 3 301 -8 203 171 0 24 chr10 24227970 24228011 -116088754 + GA-rich Low_complexity Low_complexity 2 41 0 269 308 64 0 chr10 24228145 24228223 -116088542 + L2 LINE L2 3229 3311 -2 852 289 93 14 chr10 24228275 24228631 -116088134 - MLT1L LTR MaLR -10 605 222 25 65 0 0 chr10 24229453 24229499 -116087266 + AT_rich Low_complexity Low_complexity 1 46 0 194 288 14 27 chr10 24229827 24229900 -116086865 + L2 LINE L2 3242 3313 0 1085 183 27 27 chr10 24232414 24232633 -116084132 - MER20 DNA MER1_type 0 219 1 21 36 0 0 chr10 24233315 24233343 -116083422 + AT_rich Low_complexity Low_complexity 1 28 0 290 233 29 68 chr10 24234152 24234255 -116082510 + L2 LINE L2 3174 3272 0 28 48 0 0 chr10 24236830 24236872 -116079893 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr10 24236980 24237012 -116079753 + AT_rich Low_complexity Low_complexity 1 32 0 205 179 26 0 chr10 24237542 24237581 -116079184 + CT-rich Low_complexity Low_complexity 3 42 0 760 196 12 0 chr10 24238341 24238514 -116078251 - L1M4 LINE L1 -783 5363 5189 4340 172 43 7 chr10 24238752 24239031 -116077734 - L1MB8 LINE L1 0 6178 5911 1643 185 17 14 chr10 24239031 24239318 -116077447 - AluJo SINE Alu -24 288 1 4340 172 43 7 chr10 24239318 24240127 -116076638 - L1MB8 LINE L1 -267 5911 5041 1207 137 114 24 chr10 24240231 24240474 -116076291 - MSTA LTR MaLR 0 428 160 2199 124 11 8 chr10 24240474 24240828 -116075937 + THE1A LTR MaLR 1 355 0 1207 137 114 24 chr10 24240828 24240839 -116075926 - MSTA LTR MaLR -268 160 151 3198 187 66 52 chr10 24241471 24241508 -116075257 + L1M4 LINE L1 4215 4250 -1896 270 56 0 0 chr10 24241508 24241544 -116075221 + (CA)n Simple_repeat Simple_repeat 1 36 0 3198 187 66 52 chr10 24241544 24241612 -116075153 + L1M4 LINE L1 4250 4316 -1830 1927 118 0 69 chr10 24241612 24241918 -116074847 - AluSx SINE Alu -19 293 9 3198 187 66 52 chr10 24241918 24242757 -116074008 + L1M4 LINE L1 4316 5177 -969 1665 194 7 10 chr10 24242757 24243050 -116073715 + AluJo SINE Alu 3 294 -18 3198 187 66 52 chr10 24243050 24243108 -116073657 + L1M4 LINE L1 5177 5233 -913 2239 109 0 0 chr10 24243135 24243428 -116073337 - AluSx SINE Alu -19 293 1 1977 166 3 29 chr10 24243439 24243824 -116072941 - L1MB8 LINE L1 -1 6177 5803 746 273 77 9 chr10 24246300 24246520 -116070245 + MIR SINE MIR 10 244 -18 3109 59 5 2 chr10 24247447 24247853 -116068912 - L1PA3 LINE L1 -4 6151 5745 24 32 0 0 chr10 24250485 24250516 -116066249 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 24257087 24257115 -116059650 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 24258694 24258716 -116058049 + GC_rich Low_complexity Low_complexity 1 22 0 381 302 84 80 chr10 24262632 24263302 -116053463 + L1M2 LINE L1 767 1407 -5442 210 143 0 0 chr10 24268516 24268551 -116048214 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 920 23 8 23 chr10 24268591 24268721 -116048044 + (TTC)n Simple_repeat Simple_repeat 2 129 0 1730 166 92 3 chr10 24269018 24269397 -116047368 - L1MD2 LINE L1 -17 6342 5930 2130 100 0 0 chr10 24270154 24270425 -116046340 - AluSc SINE Alu -14 295 25 1952 137 27 3 chr10 24270991 24271161 -116045604 - AluSx SINE Alu -10 302 121 216 0 0 0 chr10 24271161 24271185 -116045580 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1952 137 27 3 chr10 24271185 24271307 -116045458 - AluSx SINE Alu -191 121 3 303 389 78 18 chr10 24272756 24272923 -116043842 + L2 LINE L2 2924 3100 -172 236 293 13 27 chr10 24273096 24273171 -116043594 - MIR SINE MIR -119 89 16 1984 100 43 4 chr10 24274051 24274332 -116042433 + AluY SINE Alu 1 292 -19 255 61 0 0 chr10 24274354 24274387 -116042378 + (TG)n Simple_repeat Simple_repeat 2 34 0 2169 96 31 0 chr10 24274676 24274968 -116041797 - AluSq SINE Alu -11 302 2 483 302 79 69 chr10 24275782 24276411 -116040354 - L2 LINE L2 0 3313 2597 2106 86 61 0 chr10 24276889 24277169 -116039596 + AluSx SINE Alu 1 297 -15 427 271 0 0 chr10 24277392 24277499 -116039266 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 24278015 24278036 -116038729 + AT_rich Low_complexity Low_complexity 1 21 0 510 205 98 0 chr10 24278440 24278552 -116038213 + MER91C DNA MER1_type 18 140 0 323 376 17 12 chr10 24278610 24278783 -116037982 + L2 LINE L2 2736 2909 -405 484 324 77 79 chr10 24278856 24279527 -116037238 + L2 LINE L2 2521 3186 -86 40581 34 24 2 chr10 24279744 24285763 -116031002 - L1PA3 LINE L1 0 6155 1 332 274 96 38 chr10 24286016 24286173 -116030592 - L2 LINE L2 -15 3298 3133 438 238 31 168 chr10 24286823 24286942 -116029823 - L2 LINE L2 0 3272 3138 29 0 0 0 chr10 24286942 24286971 -116029794 + AT_rich Low_complexity Low_complexity 1 29 0 438 238 31 168 chr10 24286971 24287283 -116029482 - L2 LINE L2 -134 3138 2871 2468 58 0 16 chr10 24288451 24288763 -116028002 - AluY SINE Alu -4 307 1 2076 86 0 7 chr10 24289212 24289481 -116027284 - AluSc SINE Alu -42 267 1 204 40 0 0 chr10 24289677 24289702 -116027063 + (A)n Simple_repeat Simple_repeat 1 25 0 2060 93 43 7 chr10 24290133 24290411 -116026354 + AluSx SINE Alu 1 288 -24 220 340 93 0 chr10 24290512 24290609 -116026156 - L2 LINE L2 -11 3261 3156 1307 188 45 51 chr10 24290631 24290923 -116025842 + AluJo SINE Alu 1 290 -22 448 210 76 8 chr10 24291102 24291221 -116025544 - MLT1J LTR MaLR -384 127 1 2096 98 106 53 chr10 24291364 24291477 -116025288 - MER51B LTR ERV1 0 377 271 2390 59 0 3 chr10 24291477 24291780 -116024985 + AluY SINE Alu 1 302 -9 2096 98 106 53 chr10 24291780 24292024 -116024741 - MER51B LTR ERV1 -106 271 1 2274 268 85 33 chr10 24292885 24294062 -116022703 + L2 LINE L2 2075 3313 0 1075 168 0 17 chr10 24294160 24294339 -116022426 - FRAM SINE Alu 0 40 1 219 293 17 0 chr10 24294357 24294415 -116022350 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 24294423 24294649 -116022116 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 24294874 24295183 -116021582 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 24295222 24295503 -116021262 + L1PA15 LINE L1 5888 6162 -3 1968 90 26 48 chr10 24295613 24295923 -116020842 - AluSx SINE Alu -9 303 1 194 400 0 0 chr10 24296024 24296109 -116020656 - MIR SINE MIR -130 132 48 2169 104 0 42 chr10 24296137 24296444 -116020321 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 24296703 24296984 -116019781 - AluSg SINE Alu -9 301 29 2492 73 0 0 chr10 24297693 24297993 -116018772 + AluY SINE Alu 1 300 -11 1862 166 13 0 chr10 24298108 24298410 -116018355 - AluSx SINE Alu -6 306 1 22 35 0 0 chr10 24299256 24299285 -116017480 + AT_rich Low_complexity Low_complexity 1 29 0 207 182 45 30 chr10 24299418 24299484 -116017281 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 321 290 32 0 chr10 24299492 24299585 -116017180 + MIR3 SINE MIR 106 201 -7 25 0 0 0 chr10 24299818 24299843 -116016922 + AT_rich Low_complexity Low_complexity 1 25 0 924 127 0 0 chr10 24299929 24300055 -116016710 + AluJ SINE Alu 1 126 -186 1180 114 6 11 chr10 24300066 24300242 -116016523 + LTR9 LTR ERV1 438 612 0 2563 152 21 44 chr10 24300244 24300621 -116016144 + HUERS-P3 LTR ERV1 2 367 -8552 2591 50 0 0 chr10 24300621 24300919 -116015846 - AluY SINE Alu -13 298 1 2563 152 21 44 chr10 24300919 24301016 -116015749 + HUERS-P3 LTR ERV1 367 465 -8454 480 82 0 27 chr10 24301025 24301098 -116015667 + LTR9 LTR ERV1 457 527 -85 1222 138 0 16 chr10 24301107 24301295 -116015470 + AluJ SINE Alu 127 311 -1 2063 216 137 13 chr10 24301297 24301829 -116014936 - L1ME3A LINE L1 -121 6049 5452 6852 190 25 57 chr10 24301866 24302494 -116014271 - L1MB5 LINE L1 -8 6166 5520 1759 147 61 3 chr10 24302494 24302787 -116013978 + AluSx SINE Alu 1 310 -2 6852 190 25 57 chr10 24302787 24304045 -116012720 - L1MB5 LINE L1 -654 5520 4398 2224 106 0 0 chr10 24304045 24304354 -116012411 + AluSx SINE Alu 1 309 0 6852 190 25 57 chr10 24304354 24305179 -116011586 - L1MB5 LINE L1 -1776 4398 3548 556 184 70 59 chr10 24305181 24305282 -116011483 - L1ME3A LINE L1 -723 5439 5341 1956 148 10 0 chr10 24305282 24305572 -116011193 + AluSx SINE Alu 1 293 -19 556 184 70 59 chr10 24305572 24305709 -116011056 - L1ME3A LINE L1 -821 5341 5188 183 80 0 0 chr10 24305859 24305884 -116010881 + (CA)n Simple_repeat Simple_repeat 1 25 0 1706 141 7 25 chr10 24305946 24306223 -116010542 - AluJo SINE Alu -36 276 5 703 205 0 8 chr10 24306694 24306816 -116009949 - AluJb SINE Alu -190 122 2 1219 127 6 11 chr10 24307520 24307701 -116009064 - AluJo SINE Alu -66 246 67 334 345 21 7 chr10 24308160 24308302 -116008463 - MIR SINE MIR 0 262 119 1739 173 0 27 chr10 24308542 24308843 -116007922 - AluJb SINE Alu -19 293 1 1590 164 58 0 chr10 24309162 24309437 -116007328 - AluJo SINE Alu -17 295 5 208 143 0 0 chr10 24309834 24309869 -116006896 + (A)n Simple_repeat Simple_repeat 1 35 0 2442 68 0 0 chr10 24310034 24310329 -116006436 + AluY SINE Alu 1 295 -16 180 0 0 0 chr10 24310471 24310491 -116006274 + (TA)n Simple_repeat Simple_repeat 2 21 0 419 259 63 52 chr10 24311175 24311349 -116005416 + MIR SINE MIR 17 192 -70 348 163 75 0 chr10 24311367 24311447 -116005318 + Charlie5 DNA MER1_type 28 113 -2499 415 90 333 0 chr10 24311452 24311530 -116005235 + Charlie5 DNA MER1_type 2234 2337 -275 2166 107 3 0 chr10 24311559 24311848 -116004917 - AluSp SINE Alu -23 290 1 67 65 0 0 chr10 24311994 24312117 -116004648 + AT_rich Low_complexity Low_complexity 1 123 0 21 0 0 0 chr10 24312871 24312892 -116003873 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 24315281 24315303 -116001462 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24316607 24316628 -116000137 + AT_rich Low_complexity Low_complexity 1 21 0 2470 60 0 3 chr10 24317115 24317414 -115999351 - AluY SINE Alu -13 298 1 200 217 109 65 chr10 24317733 24317825 -115998940 + MIR SINE MIR 30 125 -83 340 233 89 11 chr10 24317958 24318048 -115998717 - MER91B DNA MER1_type -4 186 90 570 148 0 111 chr10 24318065 24318200 -115998565 - MER91B DNA MER1_type -60 130 11 28 29 0 0 chr10 24318580 24318615 -115998150 + AT_rich Low_complexity Low_complexity 1 35 0 1002 212 146 25 chr10 24318827 24319101 -115997664 + HERV16 LTR ERVL 953 1259 -3737 932 333 36 0 chr10 24319307 24319610 -115997155 + HERV16 LTR ERVL 1263 1576 -3420 641 303 17 0 chr10 24319625 24319803 -115996962 + HERV16 LTR ERVL 1681 1861 -3135 1541 302 42 58 chr10 24319838 24320050 -115996715 + HERV16 LTR ERVL 3126 3340 -2424 1842 181 7 0 chr10 24320050 24320354 -115996411 + AluJo SINE Alu 1 306 -6 1541 302 42 58 chr10 24320354 24320968 -115995797 + HERV16 LTR ERVL 3340 3939 -1825 1086 312 66 42 chr10 24321073 24322222 -115994543 + HERV16 LTR ERVL 4071 5346 -418 374 295 36 36 chr10 24323210 24323322 -115993443 + L2 LINE L2 3161 3272 0 366 107 0 0 chr10 24323647 24323703 -115993062 + (TG)n Simple_repeat Simple_repeat 1 56 0 219 234 19 84 chr10 24326580 24326687 -115990078 + MIR SINE MIR 134 233 -29 600 252 8 78 chr10 24326701 24326943 -115989822 + MIR SINE MIR 31 255 -7 317 194 56 0 chr10 24327261 24327333 -115989432 + MIR SINE MIR 116 191 -71 242 286 168 29 chr10 24327813 24328325 -115988440 - L1 LINE L1 -1098 5048 4476 240 290 117 19 chr10 24328461 24328675 -115988090 - L1 LINE L1 -1857 4289 4055 403 327 126 6 chr10 24328772 24329090 -115987675 + L1MC4a LINE L1 5527 5882 -1926 1503 82 0 0 chr10 24329099 24329281 -115987484 + AluSx SINE Alu 1 182 -130 22 35 0 0 chr10 24329327 24329356 -115987409 + AT_rich Low_complexity Low_complexity 1 29 0 305 293 73 58 chr10 24329437 24329628 -115987137 - L1 LINE L1 -2228 3918 3725 1429 191 75 14 chr10 24329665 24329947 -115986818 - AluJb SINE Alu -12 300 2 1875 87 8 4 chr10 24330240 24330481 -115986284 + AluY SINE Alu 55 296 -15 203 189 0 0 chr10 24330504 24330541 -115986224 + T-rich Low_complexity Low_complexity 1 37 0 597 237 124 27 chr10 24330764 24330950 -115985815 + MARNA DNA Mariner 299 502 -84 549 319 58 16 chr10 24332925 24333238 -115983527 - L1ME1 LINE L1 -15 6151 5826 763 175 15 0 chr10 24334793 24334930 -115981835 - L1PB4 LINE L1 -3 6153 6015 191 0 103 0 chr10 24334983 24335012 -115981753 + A-rich Low_complexity Low_complexity 1 32 0 429 262 117 44 chr10 24335088 24335294 -115981471 + L2 LINE L2 3092 3312 -1 540 180 9 63 chr10 24336085 24336196 -115980569 - L2 LINE L2 -2 3311 3207 21 36 0 0 chr10 24336660 24336688 -115980077 + AT_rich Low_complexity Low_complexity 1 28 0 594 264 29 11 chr10 24337093 24337267 -115979498 + MER5B DNA MER1_type 2 178 0 1117 193 11 0 chr10 24337296 24337483 -115979282 - MER5A DNA MER1_type 0 189 1 207 0 0 0 chr10 24337845 24337868 -115978897 + (CA)n Simple_repeat Simple_repeat 2 24 0 203 152 0 0 chr10 24337869 24337902 -115978863 + GA-rich Low_complexity Low_complexity 2 34 0 790 226 198 67 chr10 24338556 24338976 -115977789 - MLT1H LTR MaLR -22 527 53 1155 179 104 21 chr10 24338979 24339258 -115977507 + L1ME1 LINE L1 5864 6165 -1 476 247 78 7 chr10 24339318 24339472 -115977293 - MIR3 SINE MIR -13 195 31 2472 187 55 4 chr10 24341096 24341589 -115975176 - LTR53 LTR ERVL -1 518 1 193 267 33 0 chr10 24341961 24342021 -115974744 - L2 LINE L2 -242 3030 2969 334 269 124 97 chr10 24342672 24343003 -115973762 + L2 LINE L2 2932 3271 -1 1690 221 45 53 chr10 24343014 24343655 -115973110 + L1MC5 LINE L1 7296 7931 -30 487 238 63 53 chr10 24344551 24344757 -115972008 - MIR SINE MIR -2 260 53 1654 180 0 18 chr10 24344841 24345125 -115971640 - AluJo SINE Alu -20 292 14 205 277 85 11 chr10 24345796 24345890 -115970875 - MIR SINE MIR 0 262 162 2453 188 94 49 chr10 24346780 24347451 -115969314 + L1ME3A LINE L1 5461 6161 -9 1930 149 0 14 chr10 24347522 24347839 -115968926 + AluJb SINE Alu 1 313 0 1622 207 36 17 chr10 24348193 24348551 -115968214 - MLT1A1 LTR MaLR 0 365 1 839 149 0 30 chr10 24348856 24348990 -115967775 + AluJo SINE Alu 5 134 -178 654 278 5 43 chr10 24349281 24349490 -115967275 - MIR SINE MIR -1 261 61 288 203 203 117 chr10 24349500 24349531 -115967234 - MER5B DNA MER1_type -1 177 150 1793 139 16 36 chr10 24349531 24349710 -115967055 - AluJo SINE Alu -15 297 125 2540 64 0 0 chr10 24349710 24350021 -115966744 + AluY SINE Alu 1 311 0 1793 139 16 36 chr10 24350021 24350144 -115966621 - AluJo SINE Alu -187 125 1 288 203 203 117 chr10 24350144 24350275 -115966490 - MER5B DNA MER1_type -28 150 1 298 175 113 38 chr10 24350474 24350554 -115966211 + MIR3 SINE MIR 120 205 -3 1004 184 0 0 chr10 24351887 24352055 -115964710 - FRAM SINE Alu 0 176 9 241 281 41 48 chr10 24353117 24353263 -115963502 + L1ME LINE L1 5634 5778 -343 1973 134 0 13 chr10 24353612 24353910 -115962855 - AluJo SINE Alu -16 296 3 2009 115 45 3 chr10 24355184 24355472 -115961293 + AluJo SINE Alu 1 300 -12 34 0 0 0 chr10 24355474 24355508 -115961257 + AT_rich Low_complexity Low_complexity 1 34 0 1779 142 9 64 chr10 24356032 24356362 -115960403 + AluJo SINE Alu 1 312 0 354 233 129 64 chr10 24356577 24356779 -115959986 + LTR45 LTR ERV1 372 586 -17 243 0 0 0 chr10 24357533 24357560 -115959205 + (CA)n Simple_repeat Simple_repeat 1 27 0 629 264 63 38 chr10 24357844 24358083 -115958682 - MIR SINE MIR 0 262 18 1037 164 0 0 chr10 24358214 24358373 -115958392 - FRAM SINE Alu -22 154 1 2062 120 7 0 chr10 24358386 24358669 -115958096 - AluSx SINE Alu -25 287 3 1971 141 3 3 chr10 24359325 24359622 -115957143 - AluJo SINE Alu -15 297 1 261 0 0 0 chr10 24360171 24360200 -115956565 + (GA)n Simple_repeat Simple_repeat 2 30 0 191 61 30 0 chr10 24360267 24360300 -115956465 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 263 203 14 0 chr10 24360907 24360976 -115955789 + GA-rich Low_complexity Low_complexity 2 71 0 203 269 48 62 chr10 24361066 24361159 -115955606 - MIR SINE MIR -40 222 130 1727 141 17 47 chr10 24361159 24361458 -115955307 - AluJo SINE Alu -22 290 1 203 269 48 62 chr10 24361458 24361509 -115955256 - MIR SINE MIR -132 130 80 721 218 4 77 chr10 24362373 24362621 -115954144 - L1MC5 LINE L1 -36 7925 7696 1734 180 3 16 chr10 24362744 24363050 -115953715 + AluJo SINE Alu 2 303 -9 475 194 142 0 chr10 24363100 24363234 -115953531 - MIR SINE MIR -28 234 82 2179 142 0 0 chr10 24364044 24364355 -115952410 - AluSx SINE Alu -1 311 1 794 129 8 23 chr10 24364811 24364943 -115951822 - FLAM_C SINE Alu -3 130 1 1702 180 50 0 chr10 24366127 24366469 -115950296 + AluJb SINE Alu 1 312 0 614 271 45 40 chr10 24367020 24367076 -115949689 - MIR SINE MIR -13 249 195 1742 188 109 0 chr10 24367076 24367405 -115949360 - MLT1A1 LTR MaLR 0 365 1 614 271 45 40 chr10 24367405 24367595 -115949170 - MIR SINE MIR -67 195 2 1816 158 0 58 chr10 24368120 24368450 -115948315 - AluJo SINE Alu -1 311 1 251 314 124 0 chr10 24368952 24369073 -115947692 + L2 LINE L2 3136 3271 -1 1590 152 20 12 chr10 24369283 24369562 -115947203 - AluJb SINE Alu 0 312 32 508 328 48 32 chr10 24369743 24369993 -115946772 - MIR SINE MIR 0 262 9 304 198 37 0 chr10 24371564 24371645 -115945120 + L1ME2 LINE L1 6080 6163 -1 1355 162 142 10 chr10 24371654 24371963 -115944802 + L1MC3 LINE L1 7436 7785 0 189 0 0 0 chr10 24376059 24376080 -115940685 + (TC)n Simple_repeat Simple_repeat 1 21 0 290 225 14 0 chr10 24376534 24376605 -115940160 - MIR SINE MIR -110 152 81 198 0 0 0 chr10 24376653 24376675 -115940090 + (CACCAT)n Simple_repeat Simple_repeat 3 24 0 1792 140 52 78 chr10 24376823 24377208 -115939557 + THE1C LTR MaLR 1 375 0 648 215 134 11 chr10 24377940 24378126 -115938639 - MIR SINE MIR 0 262 54 1468 155 8 8 chr10 24378247 24378486 -115938279 - AluJb SINE Alu -69 243 5 992 205 31 35 chr10 24379460 24379549 -115937216 + MER96B DNA MER1_type? 1 89 -328 1576 142 19 91 chr10 24379549 24379867 -115936898 - AluJb SINE Alu -17 295 1 992 205 31 35 chr10 24379867 24380035 -115936730 + MER96B DNA MER1_type? 89 257 -160 267 309 64 0 chr10 24380491 24380601 -115936164 - MIR SINE MIR -33 229 113 333 374 52 22 chr10 24380969 24381293 -115935472 - L1ME LINE L1 -532 5589 5256 540 273 57 19 chr10 24431862 24432071 -115884694 - L2 LINE L2 -727 2587 2371 366 269 107 73 chr10 24432140 24432374 -115884391 - L2 LINE L2 -843 2471 2230 551 139 10 20 chr10 24432397 24432498 -115884267 + FRAM SINE Alu 72 171 -5 1724 183 0 16 chr10 24432519 24432830 -115883935 + AluJo SINE Alu 1 306 -6 2484 59 0 3 chr10 24432833 24433137 -115883628 + AluY SINE Alu 1 303 -8 1460 165 24 24 chr10 24433715 24433969 -115882796 + AluJo SINE Alu 1 254 -58 199 75 0 50 chr10 24433996 24434036 -115882729 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 453 144 240 0 chr10 24434053 24434157 -115882608 + L1MB2 LINE L1 5696 5824 -356 1067 171 20 28 chr10 24434293 24434544 -115882221 + L1MB2 LINE L1 5912 6160 -11 938 254 111 38 chr10 24434672 24435157 -115881608 - MLT1F1 LTR MaLR -18 549 23 313 326 22 0 chr10 24435276 24435411 -115881354 + HAL1b LINE L1 475 612 -736 728 225 48 5 chr10 24435427 24435614 -115881151 + MER58A DNA MER1_type 30 224 0 241 269 59 25 chr10 24435625 24435744 -115881021 + HAL1b LINE L1 639 761 -587 879 292 78 48 chr10 24436171 24436860 -115879905 + L1 LINE L1 2197 2906 -3240 2016 148 22 8 chr10 24436861 24437218 -115879547 + Tigger1 DNA MER2_type 1 362 -2056 5161 73 11 3 chr10 24437218 24438116 -115878649 - L1PA8 LINE L1 -208 6279 5376 11360 121 29 7 chr10 24438216 24439319 -115877446 - L1PA8 LINE L1 -2674 3787 2710 201 39 0 0 chr10 24439319 24439345 -115877420 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 11360 121 29 7 chr10 24439345 24441180 -115875585 - L1PA8 LINE L1 -3751 2710 779 503 242 51 32 chr10 24441233 24441390 -115875375 + MLT1D LTR MaLR 210 369 -136 870 225 64 0 chr10 24441390 24441577 -115875188 - L1M4 LINE L1 -527 6155 5957 3145 212 76 10 chr10 24441589 24442404 -115874361 - L1M4 LINE L1 -1092 5552 4684 623 207 57 7 chr10 24442406 24442546 -115874219 + MLT1A2 LTR MaLR 228 374 0 814 244 61 0 chr10 24442547 24442760 -115874005 - L1M4 LINE L1 -2028 4616 4391 784 201 29 42 chr10 24442780 24443019 -115873746 - L1M4 LINE L1 -3097 3547 3312 * 1700 205 37 42 chr10 24442996 24443358 -115873407 - L1M4 LINE L1 -4945 1597 1236 1761 148 31 17 chr10 24443358 24443648 -115873117 - AluSx SINE Alu -18 294 1 1700 205 37 42 chr10 24443648 24443767 -115872998 - L1M4 LINE L1 -5306 1236 1118 1772 90 32 111 chr10 24444059 24444402 -115872363 - L1P3 LINE L1 -3640 2821 2506 * 9775 130 28 3 chr10 24444399 24445888 -115870877 - L1P3 LINE L1 -4935 1526 1 653 241 151 25 chr10 24446036 24446235 -115870530 - MER58A DNA MER1_type 0 224 1 213 214 0 0 chr10 24446287 24446329 -115870436 + GA-rich Low_complexity Low_complexity 4 45 0 1275 157 0 14 chr10 24446333 24446549 -115870216 + AluJo SINE Alu 100 312 0 191 379 63 0 chr10 24446604 24446699 -115870066 - MER5A DNA MER1_type 0 189 89 450 235 10 0 chr10 24446894 24446992 -115869773 + MIR SINE MIR 44 142 -66 2305 110 0 3 chr10 24447264 24447573 -115869192 - AluSx SINE Alu -4 308 1 27 0 0 0 chr10 24447796 24447823 -115868942 + AT_rich Low_complexity Low_complexity 1 27 0 1291 136 4 75 chr10 24447830 24448058 -115868707 - AluJo SINE Alu -49 263 52 2261 103 15 29 chr10 24449146 24449486 -115867279 - MER1B DNA MER1_type -2 335 1 192 182 0 0 chr10 24451604 24451648 -115865117 + (CAT)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 24451678 24451702 -115865063 + (A)n Simple_repeat Simple_repeat 1 24 0 243 88 0 0 chr10 24451781 24451815 -115864950 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 185 182 18 0 chr10 24451901 24451956 -115864809 + (CA)n Simple_repeat Simple_repeat 1 56 0 385 241 31 98 chr10 24454119 24454340 -115862425 + MIR SINE MIR 11 217 -45 477 50 0 0 chr10 24454850 24454910 -115861855 + (GA)n Simple_repeat Simple_repeat 1 60 0 2207 110 10 0 chr10 24455702 24455994 -115860771 - AluSp SINE Alu -18 295 1 278 272 39 10 chr10 24456596 24456699 -115860066 + (TATG)n Simple_repeat Simple_repeat 2 107 0 1737 146 4 15 chr10 24461063 24461337 -115855428 - AluJo SINE Alu -16 296 26 2046 138 3 0 chr10 24461777 24462067 -115854698 - AluJo SINE Alu -21 291 1 200 303 15 0 chr10 24462753 24462819 -115853946 + MIR SINE MIR 81 147 -61 1668 67 9 0 chr10 24463557 24463767 -115852998 + AluY SINE Alu 100 311 0 241 289 35 35 chr10 24467248 24467390 -115849375 + MIR SINE MIR 10 151 -111 266 281 164 20 chr10 24467438 24467584 -115849181 - MIR SINE MIR -56 206 40 216 0 0 0 chr10 24467742 24467766 -115848999 + (T)n Simple_repeat Simple_repeat 1 24 0 1848 167 0 16 chr10 24467806 24468112 -115848653 + AluJb SINE Alu 1 301 -11 610 223 94 5 chr10 24469152 24469354 -115847411 + MIR SINE MIR 15 234 -28 471 227 100 27 chr10 24469490 24469640 -115847125 + MIR SINE MIR 76 236 -26 1454 88 60 9 chr10 24469752 24469967 -115846798 + MER30 DNA MER1_type 4 229 -1 594 298 44 24 chr10 24475832 24476084 -115840681 + MIR SINE MIR 2 258 -4 237 268 105 42 chr10 24476945 24477135 -115839630 + L2 LINE L2 1804 2005 -1309 211 356 10 29 chr10 24477135 24477239 -115839526 + L2 LINE L2 3149 3250 -22 257 270 96 89 chr10 24477269 24477468 -115839297 + L2 LINE L2 2109 2305 -967 8723 56 9 4 chr10 24477468 24478533 -115838232 + MER11C LTR ERVK 1 1071 0 257 270 96 89 chr10 24478533 24479083 -115837682 + L2 LINE L2 2305 3154 -118 254 350 70 14 chr10 24479563 24479706 -115837059 - MIR3 SINE MIR -25 183 33 214 286 71 41 chr10 24480671 24480769 -115835996 - L2 LINE L2 -4 3268 3168 300 83 0 0 chr10 24481825 24481873 -115834892 + (TG)n Simple_repeat Simple_repeat 2 49 0 25 51 0 0 chr10 24481983 24482022 -115834743 + AT_rich Low_complexity Low_complexity 1 39 0 462 267 48 12 chr10 24482336 24482501 -115834264 - MIR SINE MIR -6 256 86 846 257 52 0 chr10 24482805 24483015 -115833750 + Charlie1a DNA MER1_type 2 222 -1233 4459 190 64 38 chr10 24483199 24484321 -115832444 + Charlie1a DNA MER1_type 301 1451 -4 784 250 9 47 chr10 24484334 24484514 -115832251 - MER58A DNA MER1_type -2196 224 53 1745 167 43 7 chr10 24484514 24484814 -115831951 + AluJb SINE Alu 1 311 -1 784 250 9 47 chr10 24484814 24484865 -115831900 - MER58A DNA MER1_type -2367 53 2 186 175 35 53 chr10 24484897 24484954 -115831811 + L2 LINE L2 2706 2761 -553 670 258 194 25 chr10 24484968 24485282 -115831483 + L2 LINE L2 2932 3298 -15 372 328 51 15 chr10 24487152 24487347 -115829418 + MIR SINE MIR 21 222 -40 2339 108 0 0 chr10 24487839 24488145 -115828620 + AluSg SINE Alu 2 307 -3 436 226 219 7 chr10 24488737 24488883 -115827882 + MIR SINE MIR 61 237 -25 2162 101 10 17 chr10 24488983 24489280 -115827485 + AluSx SINE Alu 10 304 -8 215 331 31 54 chr10 24489290 24489420 -115827345 - L2 LINE L2 -4 3309 3183 1151 168 66 1 chr10 24489469 24489835 -115826930 + MSTB1 LTR MaLR 1 432 0 216 275 64 28 chr10 24489908 24490017 -115826748 + L2 LINE L2 1597 1709 -1605 331 267 223 5 chr10 24490122 24490324 -115826441 + L1MC5 LINE L1 7620 7865 -96 240 362 107 26 chr10 24490370 24490914 -115825851 + L2 LINE L2 1698 2285 -1029 2100 137 0 9 chr10 24491804 24492119 -115824646 + AluSx SINE Alu 1 312 0 772 209 0 0 chr10 24492549 24492688 -115824077 + FLAM_C SINE Alu 2 140 -3 783 123 0 0 chr10 24493658 24493772 -115822993 + FLAM_A SINE Alu 29 142 0 1913 118 55 14 chr10 24494012 24494301 -115822464 + AluJo SINE Alu 1 301 -11 330 132 0 0 chr10 24494866 24494919 -115821846 + (GGGAA)n Simple_repeat Simple_repeat 4 56 0 189 0 0 0 chr10 24495072 24495093 -115821672 + (A)n Simple_repeat Simple_repeat 1 21 0 1832 150 49 3 chr10 24496136 24496422 -115820343 - AluSx SINE Alu -13 299 1 2416 97 0 0 chr10 24497058 24497357 -115819408 - AluSx SINE Alu -13 299 1 610 294 57 4 chr10 24497358 24497586 -115819179 - MIR SINE MIR -17 245 6 219 114 0 0 chr10 24499145 24499180 -115817585 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr10 24499270 24499293 -115817472 + AT_rich Low_complexity Low_complexity 1 23 0 264 159 63 48 chr10 24500326 24500389 -115816376 - MARNA DNA Mariner -182 404 341 1444 172 89 61 chr10 24500426 24500787 -115815978 + MLT1A2 LTR MaLR 1 371 -3 586 315 35 13 chr10 24500962 24501106 -115815659 - MIR SINE MIR -7 255 103 1794 167 3 20 chr10 24501106 24501400 -115815365 + AluJo SINE Alu 1 289 -23 586 315 35 13 chr10 24501400 24501487 -115815278 - MIR SINE MIR -159 103 19 669 300 16 24 chr10 24502661 24502908 -115813857 - MIR SINE MIR -11 251 7 298 229 292 0 chr10 24504532 24504676 -115812089 - MER5A DNA MER1_type 0 189 4 1968 155 0 13 chr10 24504919 24505223 -115811542 - AluSx SINE Alu -11 301 2 237 310 9 60 chr10 24505702 24505818 -115810947 - MIR SINE MIR -65 197 88 1775 145 4 4 chr10 24506006 24506268 -115810497 + AluSx SINE Alu 7 268 -44 181 269 0 19 chr10 24506326 24506378 -115810387 + MIR SINE MIR 102 152 -110 2458 73 3 0 chr10 24506449 24506751 -115810014 + AluSp SINE Alu 1 303 -10 400 200 60 0 chr10 24507229 24507329 -115809436 - MIR3 SINE MIR -11 197 92 1744 190 7 0 chr10 24508601 24508906 -115807859 + AluJo SINE Alu 1 307 -5 14012 113 12 27 chr10 24509677 24511886 -115804879 - L1P LINE L1 -3393 2753 578 360 304 8 33 chr10 24512010 24512286 -115804479 + GA-rich Low_complexity Low_complexity 1 269 0 210 191 0 0 chr10 24512299 24512341 -115804424 + GA-rich Low_complexity Low_complexity 2 43 0 207 296 0 56 chr10 24512357 24512482 -115804283 + GA-rich Low_complexity Low_complexity 2 119 0 1227 200 29 18 chr10 24513202 24513482 -115803283 - L1MB8 LINE L1 -11 6167 5885 372 273 49 7 chr10 24514464 24514607 -115802158 - MIR3 SINE MIR -25 183 35 216 271 0 17 chr10 24514851 24514910 -115801855 - L2 LINE L2 -10 3303 3246 341 20 40 0 chr10 24515152 24515202 -115801563 + AluSx SINE Alu 250 301 0 2019 153 0 3 chr10 24516162 24516506 -115800259 + AluJo SINE Alu 5 347 0 745 173 8 0 chr10 24516755 24516888 -115799877 - FLAM_A SINE Alu 0 142 9 273 268 52 10 chr10 24516897 24516994 -115799771 - L2 LINE L2 -14 3299 3199 24 0 0 0 chr10 24517172 24517196 -115799569 + AT_rich Low_complexity Low_complexity 1 24 0 229 247 49 37 chr10 24517809 24517890 -115798875 + L2 LINE L2 3230 3311 -2 294 95 0 0 chr10 24518182 24518224 -115798541 + (CA)n Simple_repeat Simple_repeat 1 42 0 1699 119 0 24 chr10 24520263 24520514 -115796251 + AluJo SINE Alu 54 298 -14 1767 139 108 0 chr10 24520997 24521320 -115795445 - MER46B DNA MER2_type -3 233 1 1752 162 0 40 chr10 24522770 24523073 -115793692 + AluJo SINE Alu 1 291 -21 314 386 78 0 chr10 24523189 24523342 -115793423 + L2 LINE L2 3087 3251 -21 504 233 35 0 chr10 24524999 24525115 -115791650 + L1MEd LINE L1 829 948 -5424 285 254 49 65 chr10 24525230 24525298 -115791467 + L1MEd LINE L1 1307 1375 -5009 1700 146 19 62 chr10 24525298 24525620 -115791145 + AluJo SINE Alu 5 312 0 285 254 49 65 chr10 24525620 24525736 -115791029 + L1MEd LINE L1 1375 1488 -4896 204 240 0 20 chr10 24526388 24526438 -115790327 - L2 LINE L2 -85 3187 3139 392 320 109 28 chr10 24526952 24527446 -115789319 - L2 LINE L2 -952 2362 1829 286 260 14 14 chr10 24528456 24528529 -115788236 - MIR3 SINE MIR -4 204 132 1341 181 113 15 chr10 24529308 24529574 -115787191 - AluJo SINE Alu -20 292 1 427 308 81 12 chr10 24530509 24530681 -115786084 - MIR SINE MIR -31 231 48 2390 110 0 0 chr10 24533612 24533922 -115782843 - AluSx SINE Alu -2 310 1 182 349 28 9 chr10 24534592 24534701 -115782064 + MIR SINE MIR 35 145 -63 599 250 165 5 chr10 24534720 24534920 -115781845 + Charlie8 DNA MER1_type 34 265 -2152 280 318 70 23 chr10 24535336 24535465 -115781300 + MLT1K LTR MaLR 436 570 -18 248 267 20 96 chr10 24536182 24536328 -115780437 + HAL1 LINE L1 10 144 -2363 283 289 44 0 chr10 24536874 24536964 -115779801 + HAL1 LINE L1 808 901 -1606 246 300 120 15 chr10 24537050 24537250 -115779515 + HAL1 LINE L1 2132 2352 -155 225 296 37 65 chr10 24537261 24537369 -115779396 + L1MC1 LINE L1 5831 5935 -1873 2894 239 50 45 chr10 24537754 24538710 -115778055 + Charlie7 DNA MER1_type 213 1173 -1439 2290 216 84 52 chr10 24538738 24539544 -115777221 + Charlie7 DNA MER1_type 1575 2406 -206 360 0 0 0 chr10 24541777 24541817 -115774948 + (A)n Simple_repeat Simple_repeat 1 40 0 3294 140 32 10 chr10 24542642 24543238 -115773527 - MER4B LTR ERV1 -1 778 1 895 227 16 11 chr10 24544242 24544427 -115772338 + AluJo SINE Alu 2 187 -125 2836 222 107 23 chr10 24545373 24545400 -115771365 + L1MC4a LINE L1 6918 6941 -994 1390 251 8 51 chr10 24545400 24545791 -115770974 + MLT1A2 LTR MaLR 1 374 0 2836 222 107 23 chr10 24545791 24546594 -115770171 + L1MC4a LINE L1 6941 7935 0 428 307 74 35 chr10 24547171 24547402 -115769363 - MIR SINE MIR -8 254 15 182 211 197 13 chr10 24548137 24548213 -115768552 + L2 LINE L2 3173 3262 -10 1538 190 17 40 chr10 24549269 24549621 -115767144 + L1MC1 LINE L1 5989 6332 -1 199 311 198 34 chr10 24549992 24550230 -115766535 - L2 LINE L2 -842 2472 2196 1483 167 36 75 chr10 24550435 24550740 -115766025 - AluJb SINE Alu -9 303 11 394 190 170 13 chr10 24551100 24551225 -115765540 + MLT1H LTR MaLR 382 503 -46 21 36 0 0 chr10 24552384 24552412 -115764353 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr10 24554201 24554229 -115762536 + (T)n Simple_repeat Simple_repeat 1 28 0 396 243 0 0 chr10 24555337 24555411 -115761354 - MIR3 SINE MIR -21 187 114 1586 171 10 36 chr10 24555622 24555926 -115760839 - AluJo SINE Alu -6 306 11 246 100 125 0 chr10 24556416 24556456 -115760309 + MLT1K LTR MaLR 523 567 -21 307 267 75 41 chr10 24557024 24557170 -115759595 - L3b LINE CR1 -154 1429 1279 887 214 52 19 chr10 24557413 24557623 -115759142 + MER58A DNA MER1_type 7 223 -1 668 316 147 22 chr10 24557625 24558122 -115758643 + L2 LINE L2 78 636 -2678 786 224 79 92 chr10 24558141 24558597 -115758168 + L2 LINE L2 2212 2661 -653 498 243 144 58 chr10 24558736 24559028 -115757737 + L2 LINE L2 2996 3312 -1 1771 184 3 16 chr10 24559450 24559766 -115756999 + AluJo SINE Alu 1 312 0 1505 149 0 108 chr10 24559873 24560208 -115756557 - AluJo SINE Alu -13 299 1 380 36 54 0 chr10 24561102 24561158 -115755607 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 312 137 0 0 chr10 24561495 24561546 -115755219 + (TG)n Simple_repeat Simple_repeat 2 52 0 220 292 0 0 chr10 24564172 24564220 -115752545 + L2 LINE L2 3137 3184 -88 1183 163 44 10 chr10 24564445 24564648 -115752117 - AluJb SINE Alu -17 295 86 437 268 13 51 chr10 24565148 24565305 -115751460 + L2 LINE L2 2202 2352 -962 202 275 104 75 chr10 24565400 24565746 -115751019 + L2 LINE L2 2622 2977 -337 2041 114 13 24 chr10 24566309 24566607 -115750158 - AluSx SINE Alu -17 295 1 1476 195 32 3 chr10 24567005 24567287 -115749478 + AluJo SINE Alu 8 297 -15 1627 96 167 0 chr10 24567821 24568084 -115748681 + AluSx SINE Alu 4 306 0 767 163 24 0 chr10 24569149 24569272 -115747493 + FLAM_C SINE Alu 3 128 -5 516 317 40 22 chr10 24570478 24570705 -115746060 + MLT1K LTR MaLR 134 364 -224 2190 101 34 0 chr10 24570716 24571014 -115745751 + AluSq SINE Alu 6 313 0 444 339 12 6 chr10 24572892 24573060 -115743705 - MIR SINE MIR -10 252 84 303 279 106 37 chr10 24573195 24573356 -115743409 + MIR3 SINE MIR 32 203 -5 1163 97 58 0 chr10 24573499 24573654 -115743111 + AluSq SINE Alu 1 164 -149 1013 114 7 0 chr10 24573848 24573988 -115742777 + AluSg/x SINE Alu 137 277 -35 260 329 34 68 chr10 24574229 24574375 -115742390 + L2 LINE L2 3122 3262 -10 2222 109 3 3 chr10 24574375 24574679 -115742086 + AluSx SINE Alu 1 304 -8 1279 209 35 14 chr10 24575017 24575299 -115741466 + L1MC1 LINE L1 6046 6333 0 1863 142 3 30 chr10 24575536 24575838 -115740927 - AluJo SINE Alu -7 305 12 229 219 229 31 chr10 24575876 24575972 -115740793 + L2 LINE L2 3199 3313 0 244 263 66 103 chr10 24577319 24577532 -115739233 + MIR SINE MIR 48 252 -10 302 73 0 0 chr10 24577647 24577688 -115739077 - L1ME4a LINE L1 -2 6119 6079 298 271 66 25 chr10 24577776 24577898 -115738867 - L1ME4a LINE L1 -56 6065 5939 347 305 71 40 chr10 24577971 24578197 -115738568 - L1ME4a LINE L1 -296 5825 5593 1284 89 0 0 chr10 24578210 24578390 -115738375 + (TA)n Simple_repeat Simple_repeat 1 180 0 302 173 0 0 chr10 24578395 24578447 -115738318 - L1MC4 LINE L1 -1339 6703 6652 317 247 136 6 chr10 24579118 24579280 -115737485 - L1ME4a LINE L1 0 6121 5939 1783 144 0 40 chr10 24579642 24579940 -115736825 - AluJo SINE Alu -26 286 1 336 200 0 0 chr10 24579975 24580055 -115736710 + (TA)n Simple_repeat Simple_repeat 1 80 0 290 294 59 0 chr10 24580084 24580186 -115736579 - L1ME4a LINE L1 -459 5662 5555 459 0 0 0 chr10 24582052 24582103 -115734662 + (TG)n Simple_repeat Simple_repeat 2 52 0 255 93 0 0 chr10 24582121 24582164 -115734601 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2028 116 0 0 chr10 24582164 24582432 -115734333 - AluSg SINE Alu -38 272 5 342 206 0 14 chr10 24583442 24583515 -115733250 + Tigger3(Golem) DNA MER2_type 2 73 -2956 * 777 184 0 0 chr10 24583513 24583638 -115733127 + Tigger3(Golem) DNA MER2_type 2903 3027 -2 1919 139 4 0 chr10 24584285 24584559 -115732206 + AluJb SINE Alu 1 275 -37 189 196 0 0 chr10 24585334 24585380 -115731385 + (TA)n Simple_repeat Simple_repeat 2 47 0 200 368 9 9 chr10 24585559 24585665 -115731100 - MIR SINE MIR 0 262 157 270 0 0 0 chr10 24585934 24585964 -115730801 + (CA)n Simple_repeat Simple_repeat 2 31 0 28 29 0 0 chr10 24586095 24586130 -115730635 + AT_rich Low_complexity Low_complexity 1 35 0 210 323 31 8 chr10 24586500 24586630 -115730135 + C-rich Low_complexity Low_complexity 2 134 0 255 324 84 78 chr10 24588213 24588509 -115728256 + L2 LINE L2 2926 3223 -49 180 279 49 0 chr10 24588551 24588612 -115728153 - MIR SINE MIR -122 86 23 31 0 0 0 chr10 24588786 24588817 -115727948 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr10 24589566 24589592 -115727173 + (A)n Simple_repeat Simple_repeat 1 26 0 283 241 0 0 chr10 24589645 24589699 -115727066 - L2 LINE L2 -7 3306 3253 1523 179 34 30 chr10 24589810 24589933 -115726832 + AluJo SINE Alu 1 122 -190 279 0 0 0 chr10 24589933 24589964 -115726801 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1523 179 34 30 chr10 24589964 24590137 -115726628 + AluJo SINE Alu 122 298 -14 2334 92 0 13 chr10 24590456 24590760 -115726005 + AluSg SINE Alu 1 300 -10 232 206 14 41 chr10 24591188 24591261 -115725504 + T-rich Low_complexity Low_complexity 3 73 0 476 290 81 11 chr10 24591847 24592033 -115724732 - L2 LINE L2 -20 3293 3095 432 192 175 0 chr10 24592153 24592273 -115724492 + MER20B DNA MER1_type 590 730 -53 250 253 25 0 chr10 24592607 24592686 -115724079 - MER33 DNA MER1_type -226 98 18 280 211 154 29 chr10 24592705 24592809 -115723956 + L1MC5 LINE L1 7809 7925 -36 207 0 0 0 chr10 24593662 24593685 -115723080 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 505 282 66 24 chr10 24593869 24594082 -115722683 + L1MC4a LINE L1 5635 5856 -1952 4043 168 82 50 chr10 24594157 24595246 -115721519 + L1MB7 LINE L1 5057 6184 0 24 53 0 0 chr10 24595419 24595457 -115721308 + AT_rich Low_complexity Low_complexity 1 38 0 399 254 25 8 chr10 24595468 24595590 -115721175 + L1ME4a LINE L1 5995 6118 -3 415 244 31 53 chr10 24595739 24595872 -115720893 - MLT1H1 LTR MaLR -2 563 436 611 278 66 103 chr10 24595931 24596492 -115720273 + MER34 LTR ERV1 3 542 0 1742 195 0 3 chr10 24596542 24596849 -115719916 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr10 24596849 24596873 -115719892 + AT_rich Low_complexity Low_complexity 1 24 0 1490 196 81 22 chr10 24596929 24597251 -115719514 - MER58B DNA MER1_type 0 341 1 246 32 0 0 chr10 24598213 24598244 -115718521 + (CAA)n Simple_repeat Simple_repeat 2 32 0 259 271 131 8 chr10 24598535 24598657 -115718108 + MIR SINE MIR 16 152 -110 360 0 0 0 chr10 24598986 24599026 -115717739 + (CA)n Simple_repeat Simple_repeat 1 40 0 1458 181 18 78 chr10 24600563 24600894 -115715871 + AluJo SINE Alu 1 311 -1 287 362 8 16 chr10 24601314 24601441 -115715324 - L3 LINE CR1 -118 1459 1334 1406 188 41 31 chr10 24601627 24601920 -115714845 - AluJo SINE Alu -16 296 1 1125 239 68 73 chr10 24602329 24602695 -115714070 + L1MA9 LINE L1 5805 6171 -141 270 116 0 0 chr10 24602695 24602738 -115714027 + (CA)n Simple_repeat Simple_repeat 2 44 0 1125 239 68 73 chr10 24602738 24602750 -115714015 + L1MA9 LINE L1 6171 6182 -130 1157 254 111 3 chr10 24602750 24603057 -115713708 + MER2 DNA MER2_type 4 343 -1 1125 239 68 73 chr10 24603057 24603151 -115713614 + L1MA9 LINE L1 6182 6270 -42 1922 151 0 0 chr10 24603619 24603903 -115712862 - AluJo SINE Alu -28 284 1 1576 149 23 15 chr10 24604568 24604830 -115711935 - MER2 DNA MER2_type -81 264 1 762 175 67 129 chr10 24605274 24605514 -115711251 - MIR SINE MIR -35 227 3 296 285 234 0 chr10 24605823 24605981 -115710784 - MIR SINE MIR -66 196 2 3781 116 9 17 chr10 24607076 24607602 -115709163 - MER1A DNA MER1_type -1 526 5 684 274 6 6 chr10 24609124 24609303 -115707462 - MER8 DNA MER2_type -60 179 1 383 235 169 30 chr10 24609316 24609482 -115707283 + Charlie7 DNA MER1_type 13 201 -2411 1485 227 123 32 chr10 24609574 24610532 -115706233 + Charlie7 DNA MER1_type 1502 2608 -4 1307 186 140 19 chr10 24610767 24611074 -115705691 + MER2 DNA MER2_type 1 344 0 1620 185 0 34 chr10 24612584 24612882 -115703883 + AluJo SINE Alu 1 288 -24 288 53 0 0 chr10 24612898 24612936 -115703829 + (CA)n Simple_repeat Simple_repeat 2 39 0 819 230 43 25 chr10 24613468 24613703 -115703062 + L1ME LINE L1 5501 5739 -382 637 88 0 0 chr10 24613733 24613813 -115702952 - MADE1 DNA Mariner 0 80 1 241 253 28 118 chr10 24615661 24615839 -115700926 - MER91A DNA MER1_type 0 196 35 527 322 45 31 chr10 24617149 24617441 -115699324 + L1MEd LINE L1 509 804 -5315 1528 295 120 33 chr10 24617963 24618274 -115698491 - L2 LINE L2 0 3313 3031 2022 142 0 10 chr10 24618274 24618583 -115698182 + AluJo SINE Alu 1 306 -6 1528 295 120 33 chr10 24618583 24619444 -115697321 - L2 LINE L2 -282 3031 2035 220 313 0 0 chr10 24619489 24619572 -115697193 - L2 LINE L2 -1417 1897 1815 851 194 31 6 chr10 24619662 24619822 -115696943 + FRAM SINE Alu 3 166 0 738 199 161 0 chr10 24619951 24620112 -115696653 + MER3 DNA MER1_type 23 209 0 296 302 116 63 chr10 24620158 24620426 -115696339 - L2 LINE L2 -1856 1458 1177 324 0 0 0 chr10 24620577 24620613 -115696152 + (A)n Simple_repeat Simple_repeat 1 36 0 265 270 238 0 chr10 24620766 24620892 -115695873 - MER5A DNA MER1_type -2 187 32 2443 103 38 22 chr10 24620977 24621346 -115695419 - THE1C LTR MaLR 0 375 1 641 306 9 0 chr10 24621444 24621660 -115695105 + L2 LINE L2 2807 3024 -289 745 177 0 0 chr10 24622156 24622269 -115694496 + FLAM_C SINE Alu 6 118 -25 633 256 98 0 chr10 24622286 24622485 -115694280 - MIR SINE MIR 0 262 40 436 223 32 0 chr10 24623032 24623126 -115693639 + Charlie4 DNA MER1_type 1851 1947 -14 352 250 21 42 chr10 24623829 24623925 -115692840 + MER5A DNA MER1_type 16 109 -80 1373 189 4 15 chr10 24623967 24624227 -115692538 - AluJo SINE Alu -45 267 11 520 324 88 0 chr10 24624374 24624578 -115692187 - MIR SINE MIR -9 253 32 23 0 0 0 chr10 24625214 24625237 -115691528 + AT_rich Low_complexity Low_complexity 1 23 0 242 257 133 9 chr10 24626660 24626765 -115690000 - MIR3 SINE MIR -13 195 78 229 184 41 0 chr10 24627165 24627214 -115689551 + L2 LINE L2 3261 3311 -2 327 25 0 0 chr10 24628064 24628104 -115688661 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 80 0 0 chr10 24628508 24628558 -115688207 + GC_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 24628900 24628921 -115687844 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 24629034 24629062 -115687703 + GC_rich Low_complexity Low_complexity 1 28 0 267 133 0 0 chr10 24629263 24629308 -115687457 + (GGA)n Simple_repeat Simple_repeat 1 45 0 35 41 0 0 chr10 24629564 24629613 -115687152 + GC_rich Low_complexity Low_complexity 1 49 0 4015 181 40 32 chr10 24630840 24631031 -115685734 - MER6 DNA MER2_type -27 838 650 1812 168 0 13 chr10 24631031 24631341 -115685424 - AluJb SINE Alu -6 306 1 4015 181 40 32 chr10 24631341 24631737 -115685028 - MER6 DNA MER2_type -215 650 259 437 0 19 0 chr10 24631737 24631790 -115684975 + (CA)n Simple_repeat Simple_repeat 2 55 0 4015 181 40 32 chr10 24631790 24631824 -115684941 - MER6 DNA MER2_type -606 259 227 1901 164 0 10 chr10 24631824 24632134 -115684631 + AluJo SINE Alu 5 311 -1 4015 181 40 32 chr10 24632134 24632351 -115684414 - MER6 DNA MER2_type -638 227 -9 216 196 232 0 chr10 24632677 24632733 -115684032 + MIR SINE MIR 64 133 -75 1597 158 51 41 chr10 24633010 24633302 -115683463 + AluJo SINE Alu 3 297 -15 22 35 0 0 chr10 24633630 24633659 -115683106 + AT_rich Low_complexity Low_complexity 1 29 0 701 120 10 0 chr10 24633961 24634095 -115682670 - FRAM SINE Alu 0 181 47 915 179 12 0 chr10 24634187 24634349 -115682416 + FRAM SINE Alu 12 175 -1 1813 144 7 11 chr10 24635120 24635448 -115681317 - AluJb SINE Alu 0 327 1 364 210 50 8 chr10 24636449 24636568 -115680197 + L1ME4a LINE L1 5797 5920 -201 707 188 34 0 chr10 24636612 24636729 -115680036 + AluJo SINE Alu 16 136 -176 371 208 149 32 chr10 24636756 24636910 -115679855 + L1ME4a LINE L1 5939 6110 -11 24 32 0 0 chr10 24637291 24637322 -115679443 + AT_rich Low_complexity Low_complexity 1 31 0 1701 172 30 10 chr10 24637428 24637725 -115679040 + AluJo SINE Alu 1 303 -9 301 100 0 0 chr10 24638007 24638047 -115678718 - U2 snRNA snRNA -147 41 2 582 208 0 9 chr10 24638201 24638307 -115678458 - FRAM SINE Alu -80 96 1 1008 106 0 0 chr10 24639059 24639200 -115677565 - AluSg/x SINE Alu 0 312 172 227 336 182 14 chr10 24639751 24639894 -115676871 - L2 LINE L2 -2 3270 3104 1777 160 3 29 chr10 24639966 24640272 -115676493 + AluJo SINE Alu 6 303 -9 1123 144 77 0 chr10 24640485 24640680 -115676085 - AluJo SINE Alu -102 210 1 235 322 0 23 chr10 24640692 24640779 -115675986 - L1ME LINE L1 -233 6347 6263 433 198 75 0 chr10 24641658 24641764 -115675001 + MIR SINE MIR 139 252 -10 936 241 235 3 chr10 24641773 24642092 -115674673 - L2 LINE L2 0 3313 2921 1375 156 46 83 chr10 24642141 24642443 -115674322 + AluJo SINE Alu 11 301 -11 1022 201 51 33 chr10 24642535 24642749 -115674016 + MER58A DNA MER1_type 6 223 -1 467 297 104 69 chr10 24642805 24643297 -115673468 - MLT1K LTR MaLR -13 575 67 418 284 30 22 chr10 24643453 24643587 -115673178 - L1ME LINE L1 -543 5996 5862 2325 94 0 0 chr10 24643618 24643915 -115672850 - AluSg SINE Alu -13 297 1 987 273 93 3 chr10 24643943 24644309 -115672456 - LTR16A LTR ERVL 0 450 52 2102 101 7 14 chr10 24644797 24645085 -115671680 - AluSx SINE Alu -26 286 1 272 271 96 11 chr10 24645235 24645412 -115671353 - L1ME LINE L1 -1548 5016 4825 2202 255 72 13 chr10 24645846 24646595 -115670170 - L1ME LINE L1 -1902 4662 3870 657 254 22 0 chr10 24646611 24646835 -115669930 - L1ME LINE L1 -3764 2800 2572 * 5302 172 27 23 chr10 24646816 24647734 -115669031 - L1 LINE L1 -1768 4378 3452 2383 81 3 0 chr10 24647734 24648030 -115668735 - AluY SINE Alu -14 297 1 5302 172 27 23 chr10 24648030 24648285 -115668480 - L1 LINE L1 -2694 3452 3200 526 241 8 44 chr10 24648285 24648486 -115668279 - L1MCa LINE L1 -5869 345 7 807 291 186 14 chr10 24648559 24648999 -115667766 + L2 LINE L2 2214 2729 -585 538 314 34 6 chr10 24648984 24649159 -115667606 + L2 LINE L2 2888 3067 -246 * 382 293 8 8 chr10 24649205 24649338 -115667427 - L1MEd LINE L1 -5373 746 614 368 336 97 46 chr10 24649342 24649580 -115667185 - L1MEd LINE L1 -5573 546 297 339 283 109 61 chr10 24649594 24649824 -115666941 - L1MEd LINE L1 -5876 243 3 1412 193 3 49 chr10 24649912 24650020 -115666745 + AluJo SINE Alu 20 131 -181 2114 58 4 0 chr10 24650020 24650277 -115666488 - AluY SINE Alu -18 293 36 1412 193 3 49 chr10 24650277 24650473 -115666292 + AluJo SINE Alu 131 310 -2 1461 202 21 21 chr10 24650654 24650941 -115665824 - AluJo SINE Alu -25 287 1 438 223 108 121 chr10 24650957 24651335 -115665430 + L1ME LINE L1 5442 5831 -339 23 33 0 0 chr10 24651400 24651430 -115665335 + AT_rich Low_complexity Low_complexity 1 30 0 712 232 47 117 chr10 24651432 24651915 -115664850 + MER34B LTR ERV1 1 539 -3 1631 166 48 7 chr10 24651955 24652244 -115664521 + AluJo SINE Alu 1 301 -11 248 333 0 0 chr10 24652698 24652809 -115663956 - L1M4 LINE L1 -3650 2496 2386 644 240 90 36 chr10 24652978 24653257 -115663508 - MLT1H LTR MaLR -3 546 253 2262 103 7 0 chr10 24653300 24653600 -115663165 + AluSx SINE Alu 1 302 -10 2021 129 0 0 chr10 24653614 24653935 -115662830 + AluSx SINE Alu 5 325 0 23 0 0 0 chr10 24655002 24655025 -115661740 + AT_rich Low_complexity Low_complexity 1 23 0 2356 104 0 0 chr10 24655033 24655319 -115661446 + AluY SINE Alu 1 289 -22 225 0 0 0 chr10 24655319 24655344 -115661421 + (CA)n Simple_repeat Simple_repeat 2 26 0 2356 104 0 0 chr10 24655344 24655366 -115661399 + AluY SINE Alu 288 309 -2 979 256 168 34 chr10 24655513 24655990 -115660775 - MLT1H LTR MaLR 0 549 9 2263 109 0 0 chr10 24656014 24656308 -115660457 + AluSx SINE Alu 2 295 -17 275 325 86 7 chr10 24656670 24656821 -115659944 + MIR3 SINE MIR 20 182 -26 21 36 0 0 chr10 24656919 24656947 -115659818 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 24657019 24657040 -115659725 + AT_rich Low_complexity Low_complexity 1 21 0 2082 124 0 7 chr10 24657153 24657481 -115659284 + AluSx SINE Alu 1 326 0 2358 140 40 5 chr10 24658424 24658825 -115657940 + MSTA LTR MaLR 3 417 -11 197 192 19 58 chr10 24659248 24659300 -115657465 - L2 LINE L2 -2 3311 3262 669 251 97 20 chr10 24659546 24659741 -115657024 + MLT1H LTR MaLR 1 210 -339 30155 35 1 2 chr10 24659755 24664400 -115652365 + L1PA4 LINE L1 1536 6174 0 1471 152 24 3 chr10 24664887 24665176 -115651589 - L1MA5A LINE L1 0 6297 6003 51 31 0 0 chr10 24665334 24665399 -115651366 + AT_rich Low_complexity Low_complexity 1 65 0 475 320 68 8 chr10 24665510 24665876 -115650889 + L1ME4a LINE L1 5509 5896 -225 486 0 0 0 chr10 24666211 24666265 -115650500 + (TATAA)n Simple_repeat Simple_repeat 4 57 0 497 244 115 13 chr10 24666482 24666638 -115650127 - MIR SINE MIR -56 206 35 462 261 94 20 chr10 24666991 24667156 -115649609 - MIR SINE MIR -64 144 3 253 267 11 22 chr10 24668007 24668097 -115648668 - L1MC4 LINE L1 -1340 6702 6614 561 202 9 0 chr10 24670182 24670296 -115646469 + FLAM_A SINE Alu 6 120 -22 21 0 0 0 chr10 24670304 24670325 -115646440 + AT_rich Low_complexity Low_complexity 1 21 0 1676 169 0 29 chr10 24670415 24670693 -115646072 - AluJo SINE Alu -20 292 23 362 267 52 26 chr10 24671192 24671308 -115645457 + MIR SINE MIR 95 213 -49 2154 117 10 0 chr10 24671357 24671655 -115645110 - AluSx SINE Alu -11 301 1 2130 67 0 0 chr10 24673043 24673296 -115643469 + AluY SINE Alu 45 297 -14 1734 162 0 88 chr10 24673627 24674003 -115642762 - MER2 DNA MER2_type -1 343 1 334 263 86 19 chr10 24674015 24674224 -115642541 - L1MC5 LINE L1 -102 7859 7637 225 0 0 0 chr10 24674505 24674530 -115642235 + (T)n Simple_repeat Simple_repeat 1 25 0 2306 103 3 3 chr10 24674565 24674877 -115641888 + AluSp SINE Alu 1 312 -1 1827 178 0 7 chr10 24675056 24675354 -115641411 + AluJb SINE Alu 1 296 -16 419 294 106 6 chr10 24675463 24675623 -115641142 + MIR SINE MIR 87 262 0 2343 97 3 3 chr10 24676030 24676340 -115640425 + AluY SINE Alu 1 310 -1 779 267 72 13 chr10 24676383 24676619 -115640146 - MIR SINE MIR 0 262 13 1831 175 0 7 chr10 24676753 24677050 -115639715 - AluJb SINE Alu -17 295 1 1830 141 0 61 chr10 24677859 24678000 -115638765 + AluJo SINE Alu 1 116 -196 2327 73 0 3 chr10 24678000 24678310 -115638455 + AluSc SINE Alu 1 309 0 1830 141 0 61 chr10 24678310 24678478 -115638287 + AluJo SINE Alu 116 293 -19 991 118 26 26 chr10 24678731 24678926 -115637839 + L1MA4 LINE L1 5997 6191 -109 498 99 129 0 chr10 24679030 24679131 -115637634 + L1MA4 LINE L1 6181 6294 -6 2216 131 0 0 chr10 24679157 24679469 -115637296 + AluSx SINE Alu 1 312 0 2296 114 0 0 chr10 24680779 24681087 -115635678 + AluSx SINE Alu 1 308 -4 721 284 64 8 chr10 24682806 24683042 -115633723 + MIR SINE MIR 14 262 0 243 0 0 0 chr10 24683756 24683783 -115632982 + (TG)n Simple_repeat Simple_repeat 2 28 0 1166 161 100 34 chr10 24684359 24684728 -115632037 - MSTC LTR MaLR 0 428 3 702 182 8 0 chr10 24684984 24685105 -115631660 - FLAM_A SINE Alu -10 132 11 318 325 149 5 chr10 24685150 24685338 -115631427 + MIR SINE MIR 5 219 -43 206 320 0 0 chr10 24685402 24685452 -115631313 - L2 LINE L2 -77 3236 3187 233 167 0 0 chr10 24685820 24685856 -115630909 - L2 LINE L2 -15 3298 3263 298 319 138 54 chr10 24685897 24686323 -115630442 - L2 LINE L2 -995 2319 1858 3977 74 10 21 chr10 24686344 24686421 -115630344 + L1PA10 LINE L1 5256 5332 -836 2608 30 7 3 chr10 24686421 24686724 -115630041 + AluY SINE Alu 1 304 -7 3977 74 10 21 chr10 24686724 24687343 -115629422 + L1PA10 LINE L1 5332 6008 -160 2566 105 3 3 chr10 24687462 24687835 -115628930 + L1PA10 LINE L1 5794 6166 -2 4964 136 20 20 chr10 24687835 24688056 -115628709 - L1PA16 LINE L1 -22 6144 5925 1378 197 55 24 chr10 24688056 24688345 -115628420 - AluJo SINE Alu -14 298 1 4964 136 20 20 chr10 24688345 24689049 -115627716 - L1PA16 LINE L1 -241 5925 5219 189 337 0 0 chr10 24689055 24689147 -115627618 - L2 LINE L2 -1434 1880 1789 737 246 140 5 chr10 24689251 24689458 -115627307 + MIR SINE MIR 28 262 0 891 248 53 0 chr10 24690364 24690590 -115626175 + MIR SINE MIR 12 249 -13 1703 148 8 0 chr10 24691974 24692224 -115624541 - AluSx SINE Alu -60 252 1 1828 113 126 92 chr10 24692495 24692909 -115623856 - MSTA LTR MaLR 0 428 1 21 95 0 0 chr10 24693043 24693106 -115623659 + AT_rich Low_complexity Low_complexity 1 63 0 2380 100 7 0 chr10 24693942 24694252 -115622513 + AluSx SINE Alu 1 312 0 263 250 12 25 chr10 24694773 24694853 -115621912 + L2 LINE L2 3161 3239 -74 823 167 0 0 chr10 24694876 24695002 -115621763 - FLAM_A SINE Alu -7 126 1 536 296 45 0 chr10 24695371 24695550 -115621215 + MIR SINE MIR 8 194 -68 861 126 152 5 chr10 24695716 24695907 -115620858 - MER44D DNA MER2_type -97 512 24 4966 226 104 46 chr10 24695938 24697322 -115619443 - L1MEc LINE L1 -1710 4505 3203 2382 103 0 0 chr10 24697322 24697624 -115619141 + AluSx SINE Alu 1 302 -10 4966 226 104 46 chr10 24697624 24698954 -115617811 - L1MEc LINE L1 -3012 3203 1627 711 140 0 0 chr10 24699012 24699119 -115617646 + U6 snRNA snRNA 1 107 0 340 110 137 0 chr10 24699119 24699192 -115617573 + L1MB4 LINE L1 6098 6180 0 251 205 13 26 chr10 24699391 24699469 -115617296 + (TA)n Simple_repeat Simple_repeat 1 77 0 239 159 79 0 chr10 24699485 24699548 -115617217 - L1MC4 LINE L1 -196 7846 7779 2289 98 23 0 chr10 24699572 24699877 -115616888 - AluSp SINE Alu -1 312 1 5497 147 36 14 chr10 24699882 24700749 -115616016 - L1MA8 LINE L1 0 6291 5445 2034 83 72 4 chr10 24700749 24701026 -115615739 - AluSx SINE Alu -16 296 1 5497 147 36 14 chr10 24701026 24701935 -115614830 - L1MA8 LINE L1 -846 5445 4466 1046 156 39 9 chr10 24701933 24702164 -115614601 - L1MA8 LINE L1 -2527 3619 3382 * 897 221 96 63 chr10 24702169 24702563 -115614202 - L1MC4 LINE L1 -264 7778 7372 28 79 0 0 chr10 24702581 24702644 -115614121 + AT_rich Low_complexity Low_complexity 1 63 0 1203 100 12 0 chr10 24702977 24703137 -115613628 - AluSg/x SINE Alu -18 292 131 784 248 78 70 chr10 24703259 24703730 -115613035 - L1ME3A LINE L1 -5 6165 5692 941 265 30 3 chr10 24703881 24704213 -115612552 - L1ME3A LINE L1 -569 5601 5261 396 0 0 0 chr10 24704433 24704477 -115612288 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 61 0 0 chr10 24705372 24705405 -115611360 + (CA)n Simple_repeat Simple_repeat 2 34 0 2088 103 14 0 chr10 24705437 24705727 -115611038 - AluSx SINE Alu -18 294 1 387 297 69 0 chr10 24705849 24705950 -115610815 - L2 LINE L2 -11 3261 3154 1936 225 91 22 chr10 24706014 24706636 -115610129 - L1ME1 LINE L1 -323 5843 5173 759 99 8 30 chr10 24706639 24706770 -115609995 - L1MA6 LINE L1 -305 5995 5868 2038 115 7 11 chr10 24706780 24707086 -115609679 + AluSx SINE Alu 1 305 0 792 259 74 70 chr10 24707096 24707322 -115609443 - L1ME1 LINE L1 -972 5174 4950 1571 157 95 0 chr10 24707322 24707596 -115609169 + AluJb SINE Alu 5 304 -8 792 259 74 70 chr10 24707596 24707894 -115608871 - L1ME1 LINE L1 -1196 4950 4648 1586 125 42 0 chr10 24707894 24708134 -115608631 - AluSx SINE Alu -10 302 53 366 324 92 12 chr10 24708466 24708639 -115608126 - L1MC4a LINE L1 -1493 6315 6129 286 241 17 35 chr10 24708731 24708847 -115607918 - L1MC4a LINE L1 -1804 6004 5891 2397 212 36 18 chr10 24708856 24709261 -115607504 - L1ME1 LINE L1 -5 6161 5740 2301 143 20 79 chr10 24709261 24709716 -115607049 + MSTA LTR MaLR 1 428 0 2397 212 36 18 chr10 24709716 24709922 -115606843 - L1ME1 LINE L1 -426 5740 5539 1603 167 16 0 chr10 24710419 24710677 -115606088 - AluJo SINE Alu -15 297 36 180 111 0 0 chr10 24711181 24711208 -115605557 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 227 257 0 14 chr10 24711215 24711289 -115605476 + L1MC4 LINE L1 6614 6686 -1356 2378 85 0 3 chr10 24711391 24711685 -115605080 + AluSg SINE Alu 1 293 -17 1845 182 7 0 chr10 24711824 24712120 -115604645 + AluJb SINE Alu 1 298 -14 500 120 0 11 chr10 24712194 24712286 -115604479 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 271 146 0 36 chr10 24712689 24712744 -115604021 + MLT1H LTR MaLR 123 175 -374 240 204 37 0 chr10 24712895 24712949 -115603816 + MER63 DNA MER1_type 3 684 -152 1144 147 0 0 chr10 24712969 24713139 -115603626 + AluJo SINE Alu 126 295 -17 1410 206 43 45 chr10 24713159 24713426 -115603339 + MER63 DNA MER1_type 683 949 -113 1888 176 3 6 chr10 24713426 24713739 -115603026 - AluSx SINE Alu 0 312 1 1410 206 43 45 chr10 24713739 24713808 -115602957 + MER63 DNA MER1_type 949 1020 -42 2088 121 8 51 chr10 24713808 24714179 -115602586 + THE1A LTR MaLR 1 355 0 1410 206 43 45 chr10 24714179 24714215 -115602550 + MER63 DNA MER1_type 1020 1055 -7 709 243 7 0 chr10 24714941 24715085 -115601680 - FRAM SINE Alu -30 146 2 1855 184 7 3 chr10 24715135 24715445 -115601320 - AluJb SINE Alu -1 311 1 1906 123 0 42 chr10 24716296 24716627 -115600138 - AluSq SINE Alu 0 313 1 1534 191 0 25 chr10 24718542 24718824 -115597941 - AluJo SINE Alu -13 299 25 198 103 0 0 chr10 24721120 24721149 -115595616 + (CA)n Simple_repeat Simple_repeat 2 30 0 2787 220 34 55 chr10 24721267 24722256 -115594509 - L1ME1 LINE L1 0 6166 5210 1809 134 0 46 chr10 24722256 24722540 -115594225 - AluSx SINE Alu -7 305 35 2787 220 34 55 chr10 24722540 24722711 -115594054 - L1ME1 LINE L1 -956 5210 5037 225 157 0 59 chr10 24722728 24722779 -115593986 - L2 LINE L2 0 3313 3266 * 442 195 58 0 chr10 24722750 24722837 -115593928 - MIR SINE MIR -13 249 158 5558 116 3 14 chr10 24722907 24723372 -115593393 - L1PB1 LINE L1 -7 6144 5675 2168 132 0 13 chr10 24723372 24723683 -115593082 - AluSx SINE Alu -4 308 2 5558 116 3 14 chr10 24723683 24724257 -115592508 - L1PB1 LINE L1 -476 5675 5116 1528 179 63 60 chr10 24724550 24724981 -115591784 - MSTB1 LTR MaLR 0 432 1 2204 118 7 0 chr10 24725691 24725997 -115590768 + AluSx SINE Alu 4 311 -1 1855 154 0 20 chr10 24726756 24727055 -115589710 - AluJo SINE Alu -19 293 1 244 325 219 18 chr10 24727555 24727893 -115588872 - L2 LINE L2 -556 2758 2353 937 131 0 0 chr10 24727926 24728056 -115588709 + FLAM_C SINE Alu 1 130 -3 923 130 0 0 chr10 24729947 24730078 -115586687 - FLAM_C SINE Alu -2 131 1 513 272 62 36 chr10 24730463 24730658 -115586107 + MLT1I LTR MaLR 7 206 -203 2392 99 0 0 chr10 24730670 24730974 -115585791 - AluSx SINE Alu -8 304 1 267 186 68 0 chr10 24731042 24731101 -115585664 + MLT1I LTR MaLR 347 409 0 833 205 12 1 chr10 24731220 24731407 -115585358 - MLT1B LTR MaLR -14 374 173 751 159 0 16 chr10 24731425 24731551 -115585214 - FLAM_A SINE Alu -8 134 11 304 222 43 34 chr10 24731564 24731681 -115585084 - MLT1B LTR MaLR -213 177 60 2271 105 0 0 chr10 24731738 24732033 -115584732 - AluSc SINE Alu -14 295 1 1718 153 45 11 chr10 24732036 24732323 -115584442 - AluJb SINE Alu -15 297 1 23 68 0 0 chr10 24732805 24732849 -115583916 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr10 24733006 24733031 -115583734 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 208 68 23 45 chr10 24733642 24733686 -115583079 + (CATTA)n Simple_repeat Simple_repeat 3 45 0 214 315 0 0 chr10 24734784 24734838 -115581927 + L2 LINE L2 3137 3190 -82 894 186 6 6 chr10 24735032 24735188 -115581577 - FRAM SINE Alu -7 159 4 2185 104 0 0 chr10 24736150 24736473 -115580292 - AluSx SINE Alu 0 327 5 459 318 108 49 chr10 24736965 24737188 -115579577 - MIR SINE MIR -25 237 2 2167 60 0 4 chr10 24737865 24738134 -115578631 + AluY SINE Alu 43 310 -1 24 53 0 0 chr10 24738557 24738595 -115578170 + AT_rich Low_complexity Low_complexity 1 38 0 263 301 68 23 chr10 24739549 24739682 -115577083 - MIR SINE MIR -6 256 118 1782 137 57 36 chr10 24739690 24740026 -115576739 - MER61A LTR ERV1 0 343 1 22930 95 35 14 chr10 24740026 24743654 -115573111 - MER61A-int LTR ERV1 0 5217 1655 1245 81 29 48 chr10 24743657 24743842 -115572923 - AluY SINE Alu -4 307 125 261 0 0 0 chr10 24743842 24743871 -115572894 + (TG)n Simple_repeat Simple_repeat 2 30 0 1245 81 29 48 chr10 24743871 24743895 -115572870 - AluY SINE Alu -186 125 102 1943 176 89 5 chr10 24744399 24744791 -115571974 + MSTB1 LTR MaLR 8 432 0 289 224 82 35 chr10 24745226 24745311 -115571454 + MLT1I LTR MaLR 278 366 -43 * 310 189 27 1 chr10 24745310 24745396 -115571369 - L1M4c LINE L1 -4906 1374 1292 1224 201 37 15 chr10 24745515 24745788 -115570977 - MLT1C LTR MaLR 0 467 189 984 167 35 48 chr10 24745815 24746042 -115570723 - MLT1C LTR MaLR -243 224 1 6104 83 11 11 chr10 24746578 24746942 -115569823 - L1PB1 LINE L1 0 6151 5788 450 0 0 0 chr10 24746942 24746992 -115569773 + (TA)n Simple_repeat Simple_repeat 1 50 0 6104 83 11 11 chr10 24746992 24747471 -115569294 - L1PB1 LINE L1 -362 5789 5308 2393 181 135 34 chr10 24747565 24748224 -115568541 + LTR48 LTR ERV1 8 766 -21 1680 285 73 48 chr10 24748238 24748904 -115567861 + L1MEc LINE L1 289 996 -5400 2130 138 0 0 chr10 24748904 24749202 -115567563 + AluSg SINE Alu 1 298 -12 1680 285 73 48 chr10 24749202 24749652 -115567113 + L1MEc LINE L1 996 1433 -4963 3863 277 39 42 chr10 24749670 24750821 -115565944 + L1PB3 LINE L1 3 1148 -5715 2114 122 66 12 chr10 24750821 24751141 -115565624 + MER1B DNA MER1_type 1 337 0 3863 277 39 42 chr10 24751141 24751637 -115565128 + L1PB3 LINE L1 1148 1644 -5219 8353 83 8 48 chr10 24751768 24753671 -115563094 + L1PA6 LINE L1 4291 6154 0 29134 70 6 2 chr10 24753679 24757406 -115559359 + L1PA4 LINE L1 7 3745 -2401 8203 45 9 2 chr10 24757406 24759123 -115557642 + L1PA4 LINE L1 4428 6151 -4 3350 216 6 11 chr10 24759123 24760045 -115556720 - L1 LINE L1 -3393 2753 1838 15399 39 1 4 chr10 24760189 24762044 -115554721 - L1P LINE L1 -811 5335 3487 14048 138 8 23 chr10 24762041 24764317 -115552448 - L1P LINE L1 -3892 2254 13 * 11577 189 26 11 chr10 24764324 24767333 -115549432 + L1PB3 LINE L1 3459 6522 -348 1991 188 88 32 chr10 24767333 24767797 -115548968 + LTR2B LTR ERV1 1 490 0 11577 189 26 11 chr10 24767797 24768151 -115548614 + L1PB3 LINE L1 6522 6869 -1 28 0 0 0 chr10 24768151 24768179 -115548586 + AT_rich Low_complexity Low_complexity 1 28 0 443 269 13 45 chr10 24769103 24769259 -115547506 + MER77 LTR ERV1 55 205 -400 958 274 40 105 chr10 24769304 24769876 -115546889 + MER21B LTR ERV1 134 668 -195 270 86 0 0 chr10 24769868 24769903 -115546862 + MER39 LTR ERV1 627 661 -46 * 2384 153 206 6 chr10 24769902 24770373 -115546392 - MER39 LTR ERV1 -15 692 128 651 214 0 126 chr10 24770379 24770594 -115546171 - MER51C LTR ERV1 0 640 453 537 154 144 0 chr10 24770926 24771030 -115545735 - MER39 LTR ERV1 -588 119 1 331 307 92 23 chr10 24771181 24771399 -115545366 - L2 LINE L2 -340 2974 2742 2058 113 137 32 chr10 24771646 24772194 -115544571 + MER4A LTR ERV1 1 664 0 537 320 31 9 chr10 24772196 24772421 -115544344 - L2 LINE L2 -904 2410 2181 2464 116 82 64 chr10 24772456 24772894 -115543871 - MER4E LTR ERV1 0 779 334 1085 83 0 7 chr10 24772895 24773039 -115543726 - MER4E LTR ERV1 -622 144 2 2605 175 40 61 chr10 24773040 24773646 -115543119 - LTR26E LTR ERV1 -29 593 1 600 161 12 125 chr10 24773809 24773934 -115542831 + Ricksha DNA DNA 2 73 -1181 1668 156 21 7 chr10 24773934 24774217 -115542548 + AluJb SINE Alu 3 289 -23 600 161 12 125 chr10 24774217 24774259 -115542506 + Ricksha DNA DNA 73 118 -1136 1579 144 12 75 chr10 24774279 24774359 -115542406 + Ricksha DNA DNA 2174 2257 -989 2408 78 14 0 chr10 24774359 24774655 -115542110 + AluY SINE Alu 1 300 -11 1579 144 12 75 chr10 24774655 24774893 -115541872 + Ricksha DNA DNA 2257 2472 -774 2070 165 41 33 chr10 24775136 24775680 -115541085 - MLT2A2 LTR ERVL 0 554 1 2112 109 20 3 chr10 24776100 24776394 -115540371 - AluSq SINE Alu -14 299 1 229 280 37 19 chr10 24777082 24777189 -115539576 + L1M4 LINE L1 5188 5296 -850 842 158 9 59 chr10 24777742 24777963 -115538802 + AluJb SINE Alu 1 210 -102 4072 119 20 31 chr10 24778335 24778696 -115538069 - L1PB1 LINE L1 -4 6147 5796 420 71 0 0 chr10 24778696 24778752 -115538013 + (CA)n Simple_repeat Simple_repeat 2 57 0 4072 119 20 31 chr10 24778752 24779090 -115537675 - L1PB1 LINE L1 -355 5796 5456 1422 235 31 52 chr10 24779449 24779538 -115537227 - L1MC/D LINE L1 -569 5790 5701 2318 179 19 27 chr10 24779538 24779951 -115536814 + MLT2D LTR ERVL 5 414 0 1422 235 31 52 chr10 24779951 24780337 -115536428 - L1MC/D LINE L1 -658 5701 5325 1813 166 80 19 chr10 24780706 24781079 -115535686 + LTR2B LTR ERV1 95 490 0 322 275 0 0 chr10 24781089 24781169 -115535596 - L1MD2 LINE L1 -260 6099 6020 787 172 48 126 chr10 24781169 24781541 -115535224 + LTR9B LTR ERV1 1 343 -301 23 86 0 0 chr10 24781718 24781776 -115534989 + GC_rich Low_complexity Low_complexity 1 58 0 5279 92 0 9 chr10 24781957 24782649 -115534116 - L1PA6 LINE L1 0 6154 5469 910 232 29 51 chr10 24782987 24783058 -115533707 - L1MC/D LINE L1 -1373 4773 4702 2169 125 0 0 chr10 24783058 24783354 -115533411 - AluSx SINE Alu -16 296 1 910 232 29 51 chr10 24783354 24783597 -115533168 - L1MC/D LINE L1 -1444 4702 4466 388 264 39 16 chr10 24783599 24783728 -115533037 + MER20B DNA MER1_type 648 779 -4 614 288 107 55 chr10 24783749 24784114 -115532651 - L2 LINE L2 -1159 2155 1772 333 248 51 8 chr10 24784263 24784380 -115532385 + L1MA10 LINE L1 6212 6333 -1 3813 144 17 8 chr10 24785545 24786532 -115530233 - L1 LINE L1 -3503 4062 3066 26 0 0 0 chr10 24788143 24788169 -115528596 + AT_rich Low_complexity Low_complexity 1 26 0 1996 132 0 0 chr10 24788210 24788490 -115528275 + AluSx SINE Alu 1 280 -32 256 286 97 65 chr10 24788692 24789154 -115527611 - L1MC/D LINE L1 -1756 4390 3914 1632 191 24 3 chr10 24790696 24790990 -115525775 + AluJo SINE Alu 1 300 -12 726 309 100 28 chr10 24791688 24792077 -115524688 + LTR33 LTR ERVL 105 521 0 251 373 60 15 chr10 24792156 24792290 -115524475 - L2 LINE L2 -7 3265 3126 192 131 16 131 chr10 24792486 24792547 -115524218 - L2 LINE L2 -188 3084 3031 618 219 39 67 chr10 24793470 24793827 -115522938 - L1MC5 LINE L1 -32 7929 7583 * 4281 69 23 0 chr10 24793825 24794387 -115522378 + L1P LINE L1 3917 4491 -1655 310 221 295 0 chr10 24794549 24794671 -115522094 + MIR SINE MIR 76 233 -29 241 340 43 0 chr10 24796789 24796883 -115519882 - L2 LINE L2 -5 3308 3211 8385 105 3 1 chr10 24797666 24798731 -115518034 - THE1-int LTR MaLR -10 1570 501 195 69 0 0 chr10 24798731 24798760 -115518005 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8385 105 3 1 chr10 24798760 24798820 -115517945 - THE1-int LTR MaLR -1079 501 443 338 264 169 14 chr10 24800455 24800603 -115516162 + MLT1H LTR MaLR 379 549 0 289 255 41 10 chr10 24800603 24800701 -115516064 + MLT1H-int LTR MaLR 1 101 -1634 1219 187 84 8 chr10 24801352 24801614 -115515151 + AluJo SINE Alu 1 282 -30 1570 108 31 4 chr10 24801985 24802245 -115514520 - L1PBa LINE L1 -4246 2617 2351 * 2117 199 20 11 chr10 24802236 24802785 -115513980 - L1PBa LINE L1 -5073 1790 1093 512 161 0 73 chr10 24803313 24803437 -115513328 - Tigger1 DNA MER2_type 0 2418 2304 4256 178 35 70 chr10 24803438 24804516 -115512249 + L1M1 LINE L1 11 1050 -6515 238 289 12 24 chr10 24806057 24806140 -115510625 + MLT1H LTR MaLR 210 291 -258 874 158 0 46 chr10 24807561 24807713 -115509052 - AluSq/x SINE Alu -167 145 1 1613 156 22 0 chr10 24807713 24807988 -115508777 - L1M4 LINE L1 -374 5810 5530 1579 217 27 12 chr10 24807988 24808539 -115508226 - L1MCa LINE L1 -4320 2287 1538 2539 134 70 20 chr10 24809287 24809728 -115507037 + LTR32 LTR ERVL 9 471 0 198 302 72 22 chr10 24809732 24809871 -115506894 + MIR SINE MIR 105 250 -12 482 198 12 0 chr10 24810057 24810138 -115506627 - MER44D DNA MER2_type -623 82 1 * 3470 90 26 80 chr10 24810136 24810596 -115506169 + MER41A LTR ERV1 1 425 -129 1719 133 0 16 chr10 24810596 24810844 -115505921 - AluSx SINE Alu -63 249 6 3470 90 26 80 chr10 24810844 24810960 -115505805 + MER41A LTR ERV1 425 546 -8 355 271 129 14 chr10 24811274 24811414 -115505351 - MIR SINE MIR -59 203 48 940 103 7 44 chr10 24811449 24811585 -115505180 + FRAM SINE Alu 16 146 -30 2846 181 42 9 chr10 24811685 24812239 -115504526 + LTR49 LTR ERV1 1 572 -23 477 0 0 0 chr10 24812712 24812765 -115504000 + (T)n Simple_repeat Simple_repeat 1 53 0 890 117 86 12 chr10 24812778 24812941 -115503824 + LTR49 LTR ERV1 421 595 0 385 205 51 0 chr10 24812942 24813020 -115503745 + MER92B LTR ERV1 62 143 -493 1463 150 59 4 chr10 24813021 24813274 -115503491 + LTR24C LTR ERV1 1 267 -368 492 148 0 83 chr10 24813795 24813903 -115502862 - L1PA11 LINE L1 0 6174 6076 1756 128 103 36 chr10 24813906 24814264 -115502501 + LTR24C LTR ERV1 251 632 -3 584 178 9 89 chr10 24814281 24814494 -115502271 + MER92B LTR ERV1 152 347 -289 387 281 25 8 chr10 24814900 24815021 -115501744 + L2 LINE L2 3159 3281 -32 320 214 25 31 chr10 24815534 24815693 -115501072 + (TA)n Simple_repeat Simple_repeat 1 158 0 476 268 52 30 chr10 24815889 24816158 -115500607 - L1M4 LINE L1 -935 5211 4937 416 201 48 54 chr10 24816165 24816340 -115500425 - MLT1I LTR MaLR 0 409 284 512 284 113 37 chr10 24816576 24817149 -115499616 - L1M4 LINE L1 -1214 4932 4316 1549 168 9 65 chr10 24817592 24817913 -115498852 + AluJo SINE Alu 1 303 -9 262 290 170 0 chr10 24818489 24818589 -115498176 + L2 LINE L2 3138 3254 -18 306 290 65 71 chr10 24819592 24819761 -115497004 + MER5B DNA MER1_type 4 171 -7 1822 197 57 20 chr10 24820280 24820630 -115496135 + MLT1A1 LTR MaLR 1 363 -2 1619 218 11 84 chr10 24821459 24821710 -115495055 + MLT1C LTR MaLR 25 226 -241 2549 93 41 11 chr10 24821710 24822074 -115494691 - THE1C LTR MaLR 0 375 1 1619 218 11 84 chr10 24822074 24822300 -115494465 + MLT1C LTR MaLR 226 467 0 380 144 89 67 chr10 24822816 24822906 -115493859 - L1MC/D LINE L1 -545 5814 5723 1252 171 28 116 chr10 24822908 24823065 -115493700 - MER63B DNA MER1_type -731 331 222 1869 179 127 24 chr10 24823065 24823523 -115493242 + LTR22 LTR ERVK 1 505 -4 1252 171 28 116 chr10 24823523 24823728 -115493037 - MER63B DNA MER1_type -840 222 1 2202 123 40 40 chr10 24823809 24824184 -115492581 + THE1C LTR MaLR 1 375 0 261 180 0 20 chr10 24824711 24824761 -115492004 - MLT1I LTR MaLR -61 329 281 676 247 119 16 chr10 24825042 24825236 -115491529 + MIR SINE MIR 49 262 0 237 65 0 0 chr10 24825499 24825530 -115491235 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1288 180 83 80 chr10 24825835 24826196 -115490569 - MLT1A2 LTR MaLR 0 374 13 207 69 0 0 chr10 24827100 24827129 -115489636 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1251 66 42 0 chr10 24827134 24827301 -115489464 - L1PA5 LINE L1 -40 6114 5941 2658 230 41 5 chr10 24827388 24828026 -115488739 - L1ME1 LINE L1 -43 6123 5463 2052 138 0 10 chr10 24828188 24828486 -115488279 + AluSx SINE Alu 1 295 -17 1473 122 105 8 chr10 24829430 24829677 -115487088 - MSTA LTR MaLR 0 428 158 2389 173 42 18 chr10 24829815 24831323 -115485442 - L1PBa LINE L1 -4584 1620 2 287 214 143 32 chr10 24831490 24831616 -115485149 - L2 LINE L2 -774 2540 2401 845 262 46 108 chr10 24832102 24832706 -115484059 + L1MEc LINE L1 310 876 -5520 * 1312 235 49 20 chr10 24832698 24833183 -115483582 + L1MEc LINE L1 2096 2562 -3653 557 206 0 28 chr10 24833189 24833330 -115483435 + L1M4 LINE L1 4386 4522 -1624 275 142 25 0 chr10 24833329 24833383 -115483382 + L1ME LINE L1 5520 5575 -587 * 1956 120 10 10 chr10 24833403 24833694 -115483071 - AluJb SINE Alu -21 291 1 3073 117 28 9 chr10 24833697 24834158 -115482607 + Tigger1 DNA MER2_type 1799 2268 -150 852 223 7 0 chr10 24834160 24834308 -115482457 + AluJo SINE Alu 3 151 -161 559 146 10 0 chr10 24834493 24834589 -115482176 + L1M4 LINE L1 4615 4711 -1435 1553 175 0 15 chr10 24834590 24834853 -115481912 + AluJo SINE Alu 1 259 -53 270 345 82 0 chr10 24834988 24835098 -115481667 - MER91C DNA MER1_type -13 127 9 2475 202 42 48 chr10 24835477 24836095 -115480670 + L1MC4a LINE L1 7003 7616 -192 1666 199 0 17 chr10 24837203 24837499 -115479266 + AluJb SINE Alu 1 291 -21 237 396 135 5 chr10 24838439 24838646 -115478119 + L2 LINE L2 2815 3048 -224 2886 88 3 8 chr10 24838873 24839237 -115477528 - THE1B LTR MaLR 0 364 3 253 299 31 10 chr10 24840078 24840175 -115476590 - L1MC4a LINE L1 -1876 5932 5834 1884 159 10 7 chr10 24840193 24840488 -115476277 - AluSx SINE Alu -16 296 1 401 181 72 0 chr10 24841273 24841356 -115475409 + FLAM_A SINE Alu 40 128 -14 2723 111 3 19 chr10 24841500 24841870 -115474895 - THE1B LTR MaLR 0 364 1 11911 98 12 25 chr10 24841870 24843470 -115473295 - THE1B-int LTR MaLR 0 1580 1 2626 126 0 21 chr10 24843470 24843842 -115472923 - THE1B LTR MaLR 0 364 1 21 57 0 0 chr10 24844466 24844501 -115472264 + AT_rich Low_complexity Low_complexity 1 35 0 2730 103 38 20 chr10 24844731 24845157 -115471608 - MSTA LTR MaLR 0 428 4 1831 175 68 11 chr10 24846929 24847283 -115469482 - MLT1A2 LTR MaLR 0 374 1 663 124 0 0 chr10 24848080 24848177 -115468588 - FRAM SINE Alu -55 121 25 344 113 0 13 chr10 24848217 24848289 -115468476 + Alu SINE Alu 247 301 -1 213 65 0 0 chr10 24848330 24848361 -115468404 + (TG)n Simple_repeat Simple_repeat 2 32 0 2384 84 0 3 chr10 24850254 24850562 -115466203 + AluSc SINE Alu 1 307 -2 1159 158 36 10 chr10 24850855 24851051 -115465714 - AluJo SINE Alu -23 289 89 1532 208 54 96 chr10 24851342 24851576 -115465189 + L1MC5 LINE L1 6640 6882 -1095 1376 205 74 37 chr10 24851576 24851874 -115464891 + AluJo SINE Alu 1 309 -3 1532 208 54 96 chr10 24851874 24852269 -115464496 + L1MC5 LINE L1 6882 7242 -735 278 281 84 24 chr10 24852289 24852527 -115464238 + L1MC5 LINE L1 7260 7491 -551 4782 212 159 88 chr10 24852612 24852984 -115463781 - L1MC3 LINE L1 0 7785 7441 1799 170 3 0 chr10 24852984 24853267 -115463498 - AluJo SINE Alu -28 284 1 4782 212 159 88 chr10 24853267 24853395 -115463370 - L1MC3 LINE L1 -344 7441 7324 314 240 0 90 chr10 24853395 24853495 -115463270 - MLT1F1 LTR MaLR -442 125 35 4782 212 159 88 chr10 24853495 24854882 -115461883 - L1MC3 LINE L1 -461 7324 5656 6603 43 4 1 chr10 24854884 24855688 -115461077 - L1PA6 LINE L1 -5 6149 5344 6008 250 51 24 chr10 24855700 24857780 -115458985 + L1ME LINE L1 3272 5403 -758 337 272 53 105 chr10 24857900 24858128 -115458637 + MIR SINE MIR 11 226 -36 269 332 14 120 chr10 24858119 24858336 -115458429 - L2 LINE L2 -114 3158 2965 * 536 351 137 25 chr10 24858426 24859059 -115457706 - L2 LINE L2 -498 2816 2113 558 149 0 0 chr10 24859101 24859188 -115457577 + FLAM_A SINE Alu 26 112 -30 438 337 116 42 chr10 24859224 24859630 -115457135 - L2 LINE L2 -1258 2056 1621 253 294 0 35 chr10 24859877 24859962 -115456803 - LTR33A LTR ERVL -144 379 298 201 245 19 0 chr10 24860065 24860118 -115456647 + L2 LINE L2 3259 3312 -1 186 173 0 77 chr10 24861294 24861346 -115455419 - MIR SINE MIR -60 148 101 364 309 46 13 chr10 24861589 24861741 -115455024 + L1ME LINE L1 5617 5773 -348 2170 118 13 0 chr10 24861942 24862246 -115454519 + AluSx SINE Alu 1 308 -4 423 132 0 0 chr10 24862250 24862318 -115454447 + (GA)n Simple_repeat Simple_repeat 2 69 0 278 59 0 0 chr10 24862318 24862352 -115454413 + (GGAAA)n Simple_repeat Simple_repeat 2 35 0 266 178 110 0 chr10 24862562 24862635 -115454130 + L1ME4a LINE L1 6029 6109 -12 2055 109 0 11 chr10 24862746 24863031 -115453734 - AluSx SINE Alu -30 282 1 28 29 0 0 chr10 24863509 24863544 -115453221 + AT_rich Low_complexity Low_complexity 1 35 0 2259 82 10 3 chr10 24864112 24864406 -115452359 - AluSg SINE Alu -14 296 1 394 271 19 19 chr10 24864716 24864823 -115451942 - L2 LINE L2 -22 3291 3185 352 316 46 40 chr10 24866019 24866193 -115450572 + MIR SINE MIR 61 235 -27 1994 81 0 0 chr10 24866822 24867099 -115449666 + AluY SINE Alu 39 315 0 512 276 99 70 chr10 24867755 24867998 -115448767 + MIR SINE MIR 13 262 0 21 0 0 0 chr10 24868540 24868561 -115448204 + AT_rich Low_complexity Low_complexity 1 21 0 340 219 55 0 chr10 24868561 24868634 -115448131 - MER3 DNA MER1_type -131 78 2 24 67 0 0 chr10 24868854 24868899 -115447866 + AT_rich Low_complexity Low_complexity 1 45 0 238 211 88 0 chr10 24869268 24869325 -115447440 + MER3 DNA MER1_type 40 101 -108 * 741 172 18 123 chr10 24869276 24869355 -115447410 - MER3 DNA MER1_type -5 204 118 739 153 0 0 chr10 24869355 24869473 -115447292 + FLAM_C SINE Alu 1 118 -15 741 172 18 123 chr10 24869473 24869620 -115447145 - MER3 DNA MER1_type -91 118 2 1987 140 3 0 chr10 24870088 24870381 -115446384 - AluJb SINE Alu -16 296 3 25 0 0 0 chr10 24870383 24870408 -115446357 + AT_rich Low_complexity Low_complexity 1 25 0 907 314 118 24 chr10 24871074 24871901 -115444864 - L2 LINE L2 0 3313 2401 846 272 44 92 chr10 24872387 24872983 -115443782 + L1ME2 LINE L1 310 876 -5520 * 1232 237 49 20 chr10 24872975 24873460 -115443305 + L1ME2 LINE L1 2096 2562 -3653 520 201 0 29 chr10 24873468 24873607 -115443158 + L1ME2 LINE L1 4457 4591 -1624 1983 199 36 91 chr10 24873615 24873670 -115443095 + L1ME2 LINE L1 5599 5655 -578 2012 147 3 0 chr10 24873670 24873962 -115442803 - AluJo SINE Alu -15 297 5 1983 199 36 91 chr10 24873962 24874565 -115442200 + L1ME2 LINE L1 5655 6221 -12 275 216 0 0 chr10 24874721 24874772 -115441993 + L2 LINE L2 3263 3313 0 478 369 66 26 chr10 24874845 24875422 -115441343 - L2 LINE L2 -1824 1490 891 1953 228 84 20 chr10 24875738 24876296 -115440469 + L1ME3 LINE L1 5462 6055 -107 320 271 134 53 chr10 24876368 24876630 -115440135 - L1MDa LINE L1 -3934 2281 2040 23 68 0 0 chr10 24876637 24876681 -115440084 + AT_rich Low_complexity Low_complexity 1 44 0 2259 100 0 3 chr10 24876831 24877130 -115439635 + AluSx SINE Alu 1 298 -14 223 229 157 0 chr10 24877732 24877802 -115438963 - MIR3 SINE MIR -3 205 125 323 295 22 79 chr10 24878895 24879034 -115437731 - MIR SINE MIR -12 250 120 993 147 84 0 chr10 24879699 24879889 -115436876 + L1MC3 LINE L1 6892 7097 -688 246 326 0 11 chr10 24879889 24879981 -115436784 + MLT1F1 LTR MaLR 35 125 -442 408 149 68 0 chr10 24879981 24880055 -115436710 + L1MC3 LINE L1 7190 7268 -517 822 154 0 23 chr10 24880060 24880190 -115436575 + AluJb SINE Alu 3 129 -183 1788 174 0 31 chr10 24880204 24880525 -115436240 + AluJb SINE Alu 1 311 -1 2107 182 88 15 chr10 24880530 24881007 -115435758 + L1MC3 LINE L1 7264 7775 -10 6354 246 59 25 chr10 24881732 24884119 -115432646 + L1MEc LINE L1 74 2380 -3835 2499 67 0 0 chr10 24884119 24884417 -115432348 - AluY SINE Alu -13 298 1 6354 246 59 25 chr10 24884417 24885029 -115431736 + L1MEc LINE L1 2380 2970 -3245 2024 132 16 3 chr10 24885029 24885332 -115431433 + AluSc SINE Alu 1 307 -2 6354 246 59 25 chr10 24885332 24886081 -115430684 + L1MEc LINE L1 2970 3941 -2274 1592 218 68 60 chr10 24886081 24886582 -115430183 + MLT1D LTR MaLR 1 505 0 6354 246 59 25 chr10 24886582 24886899 -115429866 + L1MEc LINE L1 3941 4246 -1969 326 168 253 0 chr10 24886979 24887074 -115429691 - L1ME2 LINE L1 -274 5890 5772 1580 200 53 43 chr10 24887075 24887501 -115429264 - L1ME2 LINE L1 -543 5623 5197 294 215 66 33 chr10 24887497 24887557 -115429208 - L1MC2 LINE L1 -1 6343 6286 * 1960 142 0 40 chr10 24887557 24887881 -115428884 + AluJb SINE Alu 1 311 -1 294 215 66 33 chr10 24887881 24887941 -115428824 - L1MC2 LINE L1 -58 6286 6219 2773 171 37 4 chr10 24887957 24888448 -115428317 - MLT2B2 LTR ERVL 0 515 9 480 312 139 14 chr10 24888517 24888812 -115427953 - L2 LINE L2 -15 3298 2967 1838 106 8 0 chr10 24889547 24889792 -115426973 + AluSx SINE Alu 47 293 -19 274 200 22 60 chr10 24889860 24890045 -115426720 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 726 216 12 6 chr10 24890733 24890895 -115425870 - MIR SINE MIR 0 262 100 1055 151 0 35 chr10 24891080 24891252 -115425513 + AluJb SINE Alu 127 292 -20 356 170 17 2 chr10 24891820 24891889 -115424876 + MIR SINE MIR 112 181 -27 2135 115 0 7 chr10 24891900 24892204 -115424561 - AluSx SINE Alu 0 302 1 213 39 0 0 chr10 24893324 24893350 -115423415 + (CA)n Simple_repeat Simple_repeat 2 27 0 1651 169 142 17 chr10 24893871 24894286 -115422479 - MLT1C LTR MaLR 0 467 1 296 280 93 0 chr10 24896138 24896245 -115420520 - MIR SINE MIR -77 185 69 284 277 39 54 chr10 24896418 24896548 -115420217 - MIR SINE MIR -63 199 72 1155 244 29 59 chr10 24896662 24896791 -115419974 + L1M4 LINE L1 4062 4193 -1953 2420 88 0 0 chr10 24896791 24897069 -115419696 + AluSc SINE Alu 1 281 -28 288 0 0 0 chr10 24897069 24897101 -115419664 + (CA)n Simple_repeat Simple_repeat 1 32 0 2420 88 0 0 chr10 24897101 24897128 -115419637 + AluSc SINE Alu 280 306 -3 1155 244 29 59 chr10 24897128 24897440 -115419325 + L1M4 LINE L1 4193 4490 -1656 1438 273 120 54 chr10 24897520 24897618 -115419147 - L1ME LINE L1 -4141 2120 2030 2144 117 3 7 chr10 24897618 24897918 -115418847 - AluSx SINE Alu -13 299 1 1438 273 120 54 chr10 24897918 24899382 -115417383 - L1ME LINE L1 -4231 2030 428 408 223 11 0 chr10 24899604 24899698 -115417067 - L1ME LINE L1 -5606 464 370 237 204 0 0 chr10 24899710 24899754 -115417011 - MLT2D LTR ERVL -8 445 402 1849 124 55 66 chr10 24899778 24900157 -115416608 - THE1C LTR MaLR 0 375 1 1615 191 29 3 chr10 24900193 24900507 -115416258 - MLT2D LTR ERVL -62 352 31 742 219 73 0 chr10 24900516 24900694 -115416071 - ERVL-D LTR ERVL 0 5764 5574 * 1593 108 60 4 chr10 24900691 24900942 -115415823 - ERVL-D LTR ERVL -975 4789 4525 1765 156 45 7 chr10 24901677 24901966 -115414799 - AluJb SINE Alu -12 300 1 536 343 66 52 chr10 24903229 24904025 -115412740 - L2 LINE L2 -102 3170 2375 4454 179 36 9 chr10 24904056 24904612 -115412153 - L1MB3 LINE L1 -1 6182 5642 2224 121 7 0 chr10 24904612 24904918 -115411847 - AluSx SINE Alu -4 308 1 4454 179 36 9 chr10 24904918 24905608 -115411157 - L1MB3 LINE L1 -541 5642 4903 198 343 14 14 chr10 24905613 24905686 -115411079 + MIR3 SINE MIR 130 202 -6 1719 160 0 18 chr10 24906189 24906471 -115410294 + AluJo SINE Alu 1 277 -35 378 0 0 0 chr10 24906471 24906513 -115410252 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2391 94 0 0 chr10 24906927 24907235 -115409530 - AluY SINE Alu -3 308 1 405 291 39 22 chr10 24907361 24907543 -115409222 - LTR33 LTR ERVL -2 519 335 2044 131 3 0 chr10 24907806 24908120 -115408645 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24908150 24908457 -115408308 - HAL1b LINE L1 -577 771 485 2076 117 0 32 chr10 24908457 24908766 -115407999 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24908766 24909075 -115407690 - HAL1b LINE L1 -863 485 116 355 349 102 29 chr10 24909375 24909926 -115406839 + L2 LINE L2 1706 2296 -1018 2026 147 44 6 chr10 24911363 24911724 -115405041 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24912630 24912652 -115404113 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24913915 24913946 -115402819 + AT_rich Low_complexity Low_complexity 1 31 0 189 315 81 36 chr10 24914107 24914218 -115402547 + L3 LINE CR1 1060 1175 -402 1918 114 0 11 chr10 24915283 24915555 -115401210 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24915558 24915579 -115401186 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2420 88 0 0 chr10 24916236 24916543 -115400222 - AluY SINE Alu -4 307 1 385 297 39 22 chr10 24916669 24916851 -115399914 - LTR33 LTR ERVL -2 519 335 2044 131 3 0 chr10 24917114 24917428 -115399337 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24917458 24917765 -115399000 - HAL1b LINE L1 -577 771 485 2007 119 0 35 chr10 24917765 24918075 -115398690 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24918075 24918384 -115398381 - HAL1b LINE L1 -863 485 116 355 349 102 29 chr10 24918684 24919235 -115397530 + L2 LINE L2 1706 2296 -1018 2026 147 44 6 chr10 24920672 24921033 -115395732 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24921940 24921962 -115394803 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24923226 24923257 -115393508 + AT_rich Low_complexity Low_complexity 1 31 0 189 315 81 36 chr10 24923418 24923529 -115393236 + L3 LINE CR1 1060 1175 -402 1878 114 0 15 chr10 24924594 24924867 -115391898 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24924870 24924891 -115391874 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 331 308 8 17 chr10 24925012 24925129 -115391636 - MIR SINE MIR -127 135 20 27 87 0 0 chr10 24926951 24927020 -115389745 + AT_rich Low_complexity Low_complexity 1 69 0 1727 156 0 63 chr10 24927373 24927675 -115389090 - AluJo SINE Alu -21 291 9 388 275 34 143 chr10 24928312 24928726 -115388039 + L2 LINE L2 2921 3289 -24 2099 128 0 13 chr10 24928764 24929124 -115387641 + AluSx SINE Alu 1 312 0 414 261 79 36 chr10 24933001 24933166 -115383599 - MIR SINE MIR -15 247 76 184 200 31 0 chr10 24933458 24933523 -115383242 + CT-rich Low_complexity Low_complexity 2 68 0 197 87 0 65 chr10 24933928 24933974 -115382791 + (T)n Simple_repeat Simple_repeat 1 43 0 301 318 94 60 chr10 24933990 24934257 -115382508 - L2 LINE L2 -21 3292 3017 228 326 14 56 chr10 24936200 24936344 -115380421 - L2 LINE L2 -208 3064 2927 202 288 65 39 chr10 24936634 24936906 -115379859 - L2 LINE L2 -212 3060 2776 863 154 0 15 chr10 24936911 24937047 -115379718 + AluJo SINE Alu 1 134 -178 447 309 134 4 chr10 24937079 24937325 -115379440 - L2 LINE L2 -541 2773 2496 21 57 0 0 chr10 24938617 24938652 -115378113 + AT_rich Low_complexity Low_complexity 1 35 0 433 113 0 0 chr10 24939776 24939847 -115376918 + 5S rRNA rRNA 42 112 -9 23 0 0 0 chr10 24940310 24940333 -115376432 + AT_rich Low_complexity Low_complexity 1 23 0 666 252 102 39 chr10 24941073 24941406 -115375359 + L1ME3A LINE L1 5609 5962 -208 762 144 0 8 chr10 24941761 24941886 -115374879 + FLAM_C SINE Alu 1 124 -19 661 197 167 31 chr10 24942029 24942274 -115374491 - MIR SINE MIR 0 262 3 224 391 76 0 chr10 24942384 24942476 -115374289 - L2 LINE L2 -19 3253 3155 437 356 98 32 chr10 24942761 24943076 -115373689 + L2 LINE L2 2937 3272 0 1034 194 246 6 chr10 24943686 24944027 -115372738 - MLT1D LTR MaLR 0 505 83 353 22 22 0 chr10 24945035 24945081 -115371684 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1786 151 95 0 chr10 24945084 24945369 -115371396 - AluSx SINE Alu 0 312 1 928 170 23 47 chr10 24946177 24946348 -115370417 + FAM SINE Alu 4 170 -5 1525 147 12 16 chr10 24946375 24946620 -115370145 + AluJo SINE Alu 15 258 -54 2488 50 13 0 chr10 24947430 24947729 -115369036 + AluY SINE Alu 1 303 -8 584 265 59 116 chr10 24947906 24948078 -115368687 - L2 LINE L2 -4 3309 3129 2275 111 3 0 chr10 24948078 24948384 -115368381 + AluSx SINE Alu 1 307 -5 584 265 59 116 chr10 24948384 24948853 -115367912 - L2 LINE L2 -184 3129 2685 211 264 0 57 chr10 24948912 24948965 -115367800 - L3b LINE CR1 -21 1562 1513 2265 65 34 14 chr10 24949921 24950213 -115366552 + AluSc SINE Alu 1 298 -11 2071 142 0 0 chr10 24950325 24950620 -115366145 + AluJb SINE Alu 9 303 -9 24 32 0 0 chr10 24950726 24950757 -115366008 + AT_rich Low_complexity Low_complexity 1 31 0 2123 101 0 24 chr10 24951982 24952292 -115364473 - AluSg SINE Alu 0 303 1 767 153 6 17 chr10 24952623 24952800 -115363965 + CT-rich Low_complexity Low_complexity 3 177 0 758 196 0 6 chr10 24952844 24953012 -115363753 + CT-rich Low_complexity Low_complexity 1 167 0 798 217 0 10 chr10 24953051 24953553 -115363212 + CT-rich Low_complexity Low_complexity 1 496 0 306 272 26 79 chr10 24953605 24953719 -115363046 + L2 LINE L2 3140 3247 -25 731 292 5 0 chr10 24953782 24953967 -115362798 + MIR SINE MIR 71 256 -6 274 312 78 81 chr10 24954934 24955387 -115361378 + L2 LINE L2 2246 2698 -616 2019 133 3 32 chr10 24955387 24955696 -115361069 - AluSx SINE Alu -12 300 1 274 312 78 81 chr10 24955696 24955797 -115360968 + L2 LINE L2 2698 2798 -516 1295 143 53 73 chr10 24955955 24956256 -115360509 - L1MA9 LINE L1 0 6312 6018 327 333 37 30 chr10 24956295 24956430 -115360335 + L2 LINE L2 3127 3262 -10 23 33 0 0 chr10 24956430 24956460 -115360305 + AT_rich Low_complexity Low_complexity 1 30 0 239 309 98 16 chr10 24956693 24956816 -115359949 + MIR SINE MIR 113 245 -17 3499 63 4 35 chr10 24957021 24957481 -115359284 + L1PA13 LINE L1 5716 6161 -2 745 158 72 0 chr10 24958354 24958493 -115358272 - L2 LINE L2 0 3313 3165 21 0 0 0 chr10 24959566 24959587 -115357178 + AT_rich Low_complexity Low_complexity 1 21 0 2074 130 0 3 chr10 24959980 24960291 -115356474 + AluSx SINE Alu 1 310 0 2423 86 0 0 chr10 24961012 24961314 -115355451 - AluY SINE Alu -9 302 1 243 259 25 0 chr10 24961804 24961885 -115354880 - LTR37A LTR ERV1 0 426 344 3372 194 79 19 chr10 24961896 24962028 -115354737 - L1ME1 LINE L1 -50 6116 5993 1627 150 49 59 chr10 24962028 24962335 -115354430 - AluJb SINE Alu 0 312 9 3372 194 79 19 chr10 24962335 24962613 -115354152 - L1ME1 LINE L1 -173 5993 5733 2006 110 7 28 chr10 24962613 24962933 -115353832 - AluSx SINE Alu 0 314 1 3372 194 79 19 chr10 24962933 24963295 -115353470 - L1ME1 LINE L1 -433 5733 5296 * 5983 121 7 23 chr10 24963291 24964324 -115352441 - L1PA16 LINE L1 0 6166 5152 922 250 18 0 chr10 24964312 24964540 -115352225 - L1ME1 LINE L1 -836 5310 5079 * 887 239 17 4 chr10 24964610 24964840 -115351925 - L1ME1 LINE L1 -1066 5080 4848 5620 236 42 40 chr10 24964855 24966892 -115349873 + L1MDb LINE L1 23 2054 -4352 366 23 0 0 chr10 24966892 24966935 -115349830 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 5620 236 42 40 chr10 24966935 24969170 -115347595 + L1MDb LINE L1 2054 4318 -2088 718 198 120 0 chr10 24969168 24969335 -115347430 - L1MD2 LINE L1 -130 6229 6043 * 2500 227 26 41 chr10 24969338 24970070 -115346695 - L1M4 LINE L1 -1216 4930 4210 1518 198 98 97 chr10 24970069 24970357 -115346408 - L1MDb LINE L1 -4820 1260 974 * 1700 171 3 10 chr10 24970357 24970655 -115346110 + AluJo SINE Alu 3 298 -14 1518 198 98 97 chr10 24970655 24971218 -115345547 - L1MDb LINE L1 -5106 974 445 310 289 142 64 chr10 24971235 24971453 -115345312 - L1MDb LINE L1 -5564 506 272 311 303 34 25 chr10 24971836 24971955 -115344810 - L1MDb LINE L1 -5935 135 16 984 183 65 134 chr10 24971955 24972402 -115344363 - LTR37B LTR ERV1 -50 418 3 254 200 0 55 chr10 24972499 24972554 -115344211 - L2 LINE L2 -8 3305 3254 905 249 6 6 chr10 24972709 24972886 -115343879 + MER8 DNA MER2_type 1 177 -62 260 172 121 17 chr10 24972864 24972922 -115343843 + MER2 DNA MER2_type 282 345 0 * 447 165 0 25 chr10 24972922 24972994 -115343771 - Tigger2 DNA MER2_type -2648 70 1 210 264 19 0 chr10 24973089 24973142 -115343623 + GA-rich Low_complexity Low_complexity 2 55 0 755 197 0 15 chr10 24974467 24974599 -115342166 + FLAM_C SINE Alu 2 131 -12 35 24 0 0 chr10 24974842 24974884 -115341881 + AT_rich Low_complexity Low_complexity 1 42 0 225 261 0 0 chr10 24975636 24975724 -115341041 + (TA)n Simple_repeat Simple_repeat 1 88 0 244 359 56 21 chr10 24975758 24976096 -115340669 - L2 LINE L2 -4 3268 2845 212 266 169 32 chr10 24976159 24976283 -115340482 - L2 LINE L2 -562 2752 2612 196 275 53 61 chr10 24976313 24976444 -115340321 - L2 LINE L2 -822 2492 2363 181 254 0 55 chr10 24976461 24976516 -115340249 + L2 LINE L2 3221 3272 0 267 278 124 10 chr10 24976938 24977035 -115339730 - MIR SINE MIR -61 147 40 371 346 57 38 chr10 24977248 24977478 -115339287 + L2 LINE L2 2092 2329 -985 2088 141 7 82 chr10 24977478 24977882 -115338883 - MLT1A2 LTR MaLR 0 374 1 371 346 57 38 chr10 24977882 24977914 -115338851 + L2 LINE L2 2329 2359 -955 209 338 0 0 chr10 24978375 24978443 -115338322 + L2 LINE L2 1371 1438 -1876 377 264 139 21 chr10 24978473 24978617 -115338148 + MIR SINE MIR 18 178 -84 22 0 0 0 chr10 24978666 24978688 -115338077 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24978862 24978883 -115337882 + AT_rich Low_complexity Low_complexity 1 21 0 445 320 64 25 chr10 24978965 24979168 -115337597 - MIR SINE MIR -41 221 11 27 62 0 0 chr10 24980672 24980720 -115336045 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr10 24980955 24981018 -115335747 + AT_rich Low_complexity Low_complexity 1 63 0 501 265 124 50 chr10 24981785 24982327 -115334438 + L1M4 LINE L1 4352 4927 -1219 351 252 78 13 chr10 24982595 24982720 -115334045 - MLT1J1 LTR MaLR -39 370 232 680 152 19 9 chr10 24983302 24983407 -115333358 - AluJb SINE Alu -24 288 183 268 81 0 0 chr10 24983408 24983445 -115333320 + MADE1 DNA Mariner 15 51 -29 2369 101 0 0 chr10 24983582 24983890 -115332875 - AluSx SINE Alu -4 308 1 422 267 37 7 chr10 24984427 24984562 -115332203 + MIR SINE MIR 19 157 -105 * 775 259 103 13 chr10 24984552 24984784 -115331981 - MIR SINE MIR 0 262 10 199 294 0 0 chr10 24984778 24984829 -115331936 + MIR SINE MIR 156 206 -56 * 345 82 0 0 chr10 24984856 24984905 -115331860 + (TG)n Simple_repeat Simple_repeat 2 50 0 637 217 82 9 chr10 24985003 24985183 -115331582 - MER58B DNA MER1_type -19 322 1 2101 185 89 9 chr10 24985441 24985727 -115331038 - LTR40b LTR ERVL 0 462 129 2286 99 10 0 chr10 24985727 24986020 -115330745 + AluSp SINE Alu 1 296 -17 2101 185 89 9 chr10 24986020 24986161 -115330604 - LTR40b LTR ERVL -333 129 1 209 218 51 0 chr10 24986257 24986335 -115330430 + (TA)n Simple_repeat Simple_repeat 1 82 0 572 248 130 39 chr10 24986649 24986846 -115329919 + MIR SINE MIR 11 233 -29 1951 184 82 10 chr10 24986846 24987247 -115329518 - MER95 LTR ERV -1 430 1 572 248 130 39 chr10 24987247 24987279 -115329486 + MIR SINE MIR 233 261 -1 2102 124 3 3 chr10 24987561 24987859 -115328906 - AluSx SINE Alu -13 299 2 2134 130 0 0 chr10 24988100 24988400 -115328365 - AluSx SINE Alu -12 300 1 320 209 204 57 chr10 24990086 24990314 -115326451 - MER34C LTR ERV1 -21 739 385 259 216 20 0 chr10 24990482 24990533 -115326232 - MER34 LTR ERV1 -467 75 24 402 21 0 0 chr10 24990670 24990717 -115326048 + (TA)n Simple_repeat Simple_repeat 1 47 0 1496 183 10 29 chr10 24990724 24991030 -115325735 + AluJo SINE Alu 1 300 -12 2240 113 3 3 chr10 24991065 24991375 -115325390 + AluSq SINE Alu 1 310 -3 587 307 58 0 chr10 24991920 24992109 -115324656 + MIR SINE MIR 52 251 -11 732 223 84 37 chr10 24992343 24992675 -115324090 + LTR35 LTR ERV1 350 618 0 1075 206 30 11 chr10 24992705 24992972 -115323793 + L1MA4 LINE L1 6029 6300 0 4592 143 45 35 chr10 24993098 24993381 -115323384 + LTR39 LTR ERV1 1 280 -503 2051 96 0 53 chr10 24993381 24993709 -115323056 + AluSx SINE Alu 1 312 0 4592 143 45 35 chr10 24993709 24994199 -115322566 + LTR39 LTR ERV1 280 783 0 909 247 58 55 chr10 24994284 24994434 -115322331 + MER39 LTR ERV1 1 149 -393 4137 156 11 0 chr10 24994434 24995062 -115321703 + MER41B LTR ERV1 1 635 0 909 247 58 55 chr10 24995062 24995416 -115321349 + MER39 LTR ERV1 149 539 -3 327 174 101 64 chr10 24996945 24997054 -115319711 - L1ME4a LINE L1 -19 6102 5990 4621 81 0 0 chr10 24997106 24997660 -115319105 - MER41A LTR ERV1 0 554 1 246 32 0 0 chr10 24998350 24998381 -115318384 + (T)n Simple_repeat Simple_repeat 1 31 0 974 210 49 38 chr10 24998922 24999189 -115317576 - MER39 LTR ERV1 0 707 438 1519 121 58 4 chr10 24999191 24999431 -115317334 - LTR45 LTR ERV1 0 525 273 2099 166 44 30 chr10 24999431 24999977 -115316788 - MLT2A2 LTR ERVL 0 554 1 1415 121 86 93 chr10 24999977 25000256 -115316509 - LTR45 LTR ERV1 -248 277 1 262 279 133 62 chr10 25000256 25000468 -115316297 - MER34 LTR ERV1 -268 439 2 22 80 0 0 chr10 25001217 25001267 -115315498 + AT_rich Low_complexity Low_complexity 1 50 0 421 254 52 46 chr10 25002070 25002243 -115314522 - MIR3 SINE MIR -1 207 34 2933 201 16 67 chr10 25002310 25002564 -115314201 + LTR8 LTR ERV1 16 282 -409 2542 139 55 0 chr10 25002564 25002968 -115313797 - MSTB LTR MaLR 0 426 1 2933 201 16 67 chr10 25002968 25003410 -115313355 + LTR8 LTR ERV1 282 676 -15 199 229 42 0 chr10 25003686 25003734 -115313031 + MIR3 SINE MIR 109 158 -50 1085 215 81 63 chr10 25004069 25004535 -115312230 - MER39 LTR ERV1 0 707 42 2304 109 3 3 chr10 25004535 25004847 -115311918 + AluSx SINE Alu 1 312 0 257 246 0 0 chr10 25004860 25004917 -115311848 - MER34 LTR ERV1 -485 57 1 1475 168 0 93 chr10 25004969 25005142 -115311623 - AluJo SINE Alu -21 291 160 2244 115 0 31 chr10 25005142 25005464 -115311301 - AluSx SINE Alu 0 312 1 1475 168 0 93 chr10 25005464 25005611 -115311154 - AluJo SINE Alu -152 160 1 212 256 0 0 chr10 25006457 25006500 -115310265 + L2 LINE L2 3255 3297 -16 1880 113 6 77 chr10 25007381 25007692 -115309073 - AluSx SINE Alu -23 289 1 2339 99 0 0 chr10 25008981 25009285 -115307480 - AluSg SINE Alu -6 304 1 762 182 56 10 chr10 25009292 25009490 -115307275 + Charlie1 DNA MER1_type 2550 2756 -5 198 274 0 20 chr10 25009511 25009562 -115307203 + MIR SINE MIR 30 79 -129 382 313 171 9 chr10 25009585 25009796 -115306969 + MIR SINE MIR 18 262 0 1887 153 0 19 chr10 25009881 25010188 -115306577 - AluJb SINE Alu -11 301 1 235 247 21 46 chr10 25010565 25010692 -115306073 + CT-rich Low_complexity Low_complexity 1 123 0 1704 159 0 48 chr10 25011291 25011586 -115305179 + AluJo SINE Alu 11 291 -21 814 92 0 0 chr10 25012591 25012689 -115304076 - AluSg/x SINE Alu -21 288 191 990 166 6 0 chr10 25012715 25012872 -115303893 + AluSx SINE Alu 1 158 -154 1330 129 15 5 chr10 25012973 25013199 -115303566 + AluY SINE Alu 80 307 0 1582 179 32 0 chr10 25013259 25013567 -115303198 + MER33 DNA MER1_type 3 320 -4 1751 172 69 0 chr10 25013853 25014144 -115302621 + AluJo SINE Alu 1 311 -1 1414 163 61 30 chr10 25014923 25015187 -115301578 - AluJo SINE Alu -5 307 36 2072 231 4 41 chr10 25015835 25016325 -115300440 + MLT2B1 LTR ERVL 7 478 -42 208 135 0 0 chr10 25017371 25017408 -115299357 + (A)n Simple_repeat Simple_repeat 1 37 0 495 308 97 0 chr10 25017549 25017786 -115298979 + MIR SINE MIR 3 262 0 609 293 50 22 chr10 25017986 25018208 -115298557 + MIR SINE MIR 28 255 -7 26861 34 1 1 chr10 25019244 25023228 -115293537 - L1PA4 LINE L1 0 6155 2172 2049 156 0 0 chr10 25023389 25023697 -115293068 - AluSx SINE Alu -4 308 1 1371 203 13 41 chr10 25023700 25024015 -115292750 - AluJo SINE Alu -2 310 5 1454 198 4 14 chr10 25024397 25024675 -115292090 + AluJo SINE Alu 22 296 -16 1980 135 42 0 chr10 25024886 25025175 -115291590 - AluSx SINE Alu -11 301 1 258 305 117 16 chr10 25025750 25025878 -115290887 + L3b LINE CR1 1103 1243 -340 234 128 0 0 chr10 25025902 25025941 -115290824 + (TATG)n Simple_repeat Simple_repeat 4 42 0 4202 165 23 1 chr10 25026240 25026923 -115289842 + MER44D DNA MER2_type 6 703 -2 557 325 109 43 chr10 25027002 25027895 -115288870 + L2 LINE L2 290 1255 -2059 2251 109 0 10 chr10 25027895 25028197 -115288568 + AluSx SINE Alu 1 299 -13 557 325 109 43 chr10 25028197 25028284 -115288481 + L2 LINE L2 1255 1335 -1979 620 336 55 24 chr10 25028600 25029145 -115287620 + L2 LINE L2 2226 2787 -527 2863 118 41 51 chr10 25029289 25029599 -115287166 - LTR45B LTR ERV1 0 489 184 1848 104 112 0 chr10 25029599 25029859 -115286906 - AluSg SINE Alu -19 291 3 2863 118 41 51 chr10 25029859 25030038 -115286727 - LTR45B LTR ERV1 -305 184 5 333 333 13 31 chr10 25030095 25030254 -115286511 + L2 LINE L2 3117 3272 0 2101 112 14 10 chr10 25030369 25030663 -115286102 + AluSx SINE Alu 1 295 -17 197 33 33 0 chr10 25032752 25032782 -115283983 + (TA)n Simple_repeat Simple_repeat 2 32 0 2187 118 0 0 chr10 25032782 25033069 -115283696 - AluSx SINE Alu -25 287 1 2015 108 105 31 chr10 25033139 25033490 -115283275 + MER51B LTR ERV1 1 377 0 1846 148 25 3 chr10 25033848 25034132 -115282633 + AluJo SINE Alu 5 294 -18 180 0 0 0 chr10 25034216 25034236 -115282529 + (T)n Simple_repeat Simple_repeat 1 20 0 231 133 0 0 chr10 25034816 25034861 -115281904 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 189 0 0 0 chr10 25035260 25035281 -115281484 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 761 262 102 86 chr10 25035753 25036173 -115280592 + LTR16A LTR ERVL 24 450 0 21 0 0 0 chr10 25036238 25036259 -115280506 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 25036441 25036462 -115280303 + AT_rich Low_complexity Low_complexity 1 21 0 425 258 126 26 chr10 25036853 25037124 -115279641 + L1ME4a LINE L1 5711 6008 -113 22 0 0 0 chr10 25037170 25037192 -115279573 + AT_rich Low_complexity Low_complexity 1 22 0 1117 141 0 0 chr10 25037246 25037409 -115279356 - AluSg/x SINE Alu -7 303 141 313 162 0 0 chr10 25037409 25037459 -115279306 - AluSp SINE Alu -129 174 133 2241 95 3 7 chr10 25037738 25038032 -115278733 + AluSg SINE Alu 1 293 -17 25 75 0 0 chr10 25038217 25038270 -115278495 + AT_rich Low_complexity Low_complexity 1 53 0 408 328 33 0 chr10 25038769 25038949 -115277816 + MER5A DNA MER1_type 4 189 0 1606 122 48 71 chr10 25039426 25039721 -115277044 + AluJb SINE Alu 4 291 -21 308 323 10 10 chr10 25040279 25040378 -115276387 + L2 LINE L2 3144 3242 -30 2285 114 0 19 chr10 25040390 25040706 -115276059 - AluSx SINE Alu -2 310 1 276 265 15 0 chr10 25041515 25041583 -115275182 - L2 LINE L2 0 3313 3245 1821 146 36 4 chr10 25042114 25042388 -115274377 + AluSx SINE Alu 4 286 -26 2321 45 69 3 chr10 25042586 25042876 -115273889 - AluY SINE Alu -2 309 1 248 221 73 0 chr10 25043471 25043539 -115273226 - L2 LINE L2 0 3272 3200 2187 111 6 16 chr10 25043701 25044016 -115272749 - AluSx SINE Alu 0 312 1 181 233 100 33 chr10 25044937 25044997 -115271768 + L2 LINE L2 3201 3264 -8 2408 81 10 0 chr10 25045242 25045538 -115271227 + AluY SINE Alu 1 299 -12 270 0 0 0 chr10 25045541 25045571 -115271194 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 369 0 0 0 chr10 25045570 25045611 -115271154 + (GA)n Simple_repeat Simple_repeat 2 42 0 785 181 0 0 chr10 25045689 25045822 -115270943 - FLAM_C SINE Alu 0 133 1 186 103 0 0 chr10 25046607 25046636 -115270129 + (A)n Simple_repeat Simple_repeat 1 29 0 950 121 8 0 chr10 25047752 25047884 -115268881 + AluSq/x SINE Alu 1 133 -180 28 0 0 0 chr10 25047884 25047912 -115268853 + AT_rich Low_complexity Low_complexity 1 28 0 1947 134 3 74 chr10 25048417 25048753 -115268012 + AluSx SINE Alu 1 312 0 214 209 0 0 chr10 25049414 25049457 -115267308 + L2 LINE L2 3263 3305 -8 216 325 38 0 chr10 25049829 25049909 -115266856 + MIR SINE MIR 27 109 -153 370 146 0 0 chr10 25049920 25049975 -115266790 + MER61A LTR ERV1 7 61 -282 1647 169 45 60 chr10 25049985 25050387 -115266378 + MER61-int LTR ERV1 1 396 -4821 2513 70 0 10 chr10 25050387 25050701 -115266064 + AluY SINE Alu 1 311 0 366 164 45 0 chr10 25050768 25050835 -115265930 - MER61-int LTR ERV1 -4517 700 631 2245 92 23 0 chr10 25050952 25051255 -115265510 + AluSx SINE Alu 1 310 -2 406 81 32 0 chr10 25051399 25051461 -115265304 + Alu SINE Alu 240 303 -8 738 210 74 6 chr10 25052054 25052230 -115264535 - MER5A DNA MER1_type 0 189 2 2140 132 0 16 chr10 25052275 25052579 -115264186 - AluJo SINE Alu -13 299 1 2771 10 0 10 chr10 25052749 25053057 -115263708 - AluYb8 SINE Alu -13 305 1 2344 108 0 0 chr10 25053371 25053678 -115263087 + AluSq SINE Alu 1 307 -6 1598 175 7 0 chr10 25054053 25054338 -115262427 + AluJo SINE Alu 12 298 -14 1939 162 0 13 chr10 25054837 25055151 -115261614 + AluJb SINE Alu 3 312 0 2049 123 3 3 chr10 25055293 25055585 -115261180 - AluJo SINE Alu 0 312 21 339 370 50 6 chr10 25056454 25056635 -115260130 + MIR3 SINE MIR 4 192 -16 2228 94 0 0 chr10 25057072 25057359 -115259406 + AluSx SINE Alu 1 287 -25 2988 260 85 63 chr10 25057697 25059503 -115257262 + L1ME2 LINE L1 36 1880 -4516 897 118 0 22 chr10 25059514 25059649 -115257116 + FLAM_C SINE Alu 11 142 -1 704 199 114 57 chr10 25059649 25059744 -115257021 + L1ME2 LINE L1 1868 1956 -4440 1649 181 87 16 chr10 25059744 25060065 -115256700 + MER2 DNA MER2_type 1 344 0 704 199 114 57 chr10 25060065 25060301 -115256464 + L1ME2 LINE L1 1956 2218 -4178 368 309 0 34 chr10 25060811 25060960 -115255805 - L2 LINE L2 -2657 657 514 230 285 77 69 chr10 25061349 25061479 -115255286 + MIR SINE MIR 41 171 -91 23 78 0 0 chr10 25061610 25061661 -115255104 + AT_rich Low_complexity Low_complexity 1 51 0 1717 173 4 4 chr10 25063107 25063385 -115253380 + AluJo SINE Alu 1 278 -34 23 33 0 0 chr10 25063973 25064003 -115252762 + AT_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr10 25064087 25064115 -115252650 + (CA)n Simple_repeat Simple_repeat 2 29 0 1565 272 118 57 chr10 25064187 25064821 -115251944 + L1ME2 LINE L1 3732 4326 -1889 2340 151 0 6 chr10 25064821 25065171 -115251594 + MER7A DNA MER2_type 1 346 0 1565 272 118 57 chr10 25065171 25065613 -115251152 + L1ME2 LINE L1 4326 4906 -1309 3741 138 41 35 chr10 25065613 25066274 -115250491 + L1MA7 LINE L1 5619 6283 -8 1565 272 118 57 chr10 25066274 25066515 -115250250 + L1ME2 LINE L1 4906 5131 -1084 1003 318 79 14 chr10 25066713 25067297 -115249468 + L1ME2 LINE L1 5196 5838 -395 2064 134 178 8 chr10 25067297 25067663 -115249102 - MSTA LTR MaLR 0 428 1 1003 318 79 14 chr10 25067663 25067847 -115248918 + L1ME2 LINE L1 5838 6009 -224 2197 135 3 0 chr10 25068166 25068477 -115248288 + AluJb SINE Alu 1 312 0 258 284 86 37 chr10 25068535 25068697 -115248068 - MLT1K LTR MaLR -21 567 398 240 315 79 79 chr10 25068809 25068980 -115247785 - MLT1K LTR MaLR -285 303 130 1232 122 16 126 chr10 25068980 25069226 -115247539 + MER20 DNA MER1_type 1 219 0 240 315 79 79 chr10 25069226 25069321 -115247444 - MLT1K LTR MaLR -457 131 37 543 296 119 44 chr10 25069606 25070153 -115246612 - L1ME4a LINE L1 -214 5907 5320 261 57 0 0 chr10 25070451 25070486 -115246279 + (TG)n Simple_repeat Simple_repeat 1 35 0 2592 184 114 73 chr10 25070503 25071230 -115245535 - LTR48 LTR ERV1 -30 757 1 224 310 64 89 chr10 25071711 25071914 -115244851 - MIR3 SINE MIR -3 205 8 886 316 43 39 chr10 25072328 25072816 -115243949 - MLT1J LTR MaLR -20 491 2 296 323 175 31 chr10 25073150 25073379 -115243386 - MIR SINE MIR 0 262 1 275 281 0 0 chr10 25073483 25073547 -115243218 + MIR SINE MIR 64 127 -81 6173 217 71 20 chr10 25073554 25074767 -115241998 + L1ME1 LINE L1 3648 4798 -1368 2169 94 14 0 chr10 25074767 25075043 -115241722 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr10 25075043 25075068 -115241697 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 6173 217 71 20 chr10 25075068 25075105 -115241660 + L1ME1 LINE L1 4798 4832 -1334 191 0 0 94 chr10 25075105 25075137 -115241628 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6173 217 71 20 chr10 25075137 25076148 -115240617 + L1ME1 LINE L1 4832 6025 -141 329 204 0 31 chr10 25076203 25076301 -115240464 + G-rich Low_complexity Low_complexity 5 99 0 199 157 39 0 chr10 25076354 25076405 -115240360 + GA-rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr10 25076623 25076655 -115240110 + GC_rich Low_complexity Low_complexity 1 32 0 192 149 0 0 chr10 25077269 25077316 -115239449 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 230 81 27 chr10 25077716 25077790 -115238975 - L2 LINE L2 -17 3255 3178 347 270 76 38 chr10 25077973 25078158 -115238607 + L1ME LINE L1 5632 5823 -298 1218 204 124 13 chr10 25078243 25078542 -115238223 - MLT1A2 LTR MaLR -7 367 36 286 271 100 59 chr10 25078591 25078761 -115238004 + MIR SINE MIR 86 262 0 1881 178 54 47 chr10 25079758 25080145 -115236620 - MLT1B LTR MaLR 0 390 1 1018 204 0 0 chr10 25080519 25080681 -115236084 + FAM SINE Alu 5 166 -9 2390 108 136 36 chr10 25081362 25081751 -115235014 - MSTA LTR MaLR 0 428 1 252 0 0 0 chr10 25081930 25081958 -115234807 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4632 73 10 13 chr10 25081959 25082562 -115234203 - L1PB1 LINE L1 -7 6144 5544 817 184 20 14 chr10 25082756 25083049 -115233716 - L1MD3 LINE L1 0 7995 7529 1331 238 269 20 chr10 25083131 25083766 -115232999 - L1MC4 LINE L1 -132 7910 7118 266 267 95 9 chr10 25084246 25084351 -115232414 + MIR3 SINE MIR 86 199 -9 575 291 147 17 chr10 25085429 25085776 -115230989 + L2 LINE L2 2566 2957 -357 239 195 24 85 chr10 25085927 25086009 -115230756 + L2 LINE L2 3235 3311 -2 318 26 0 0 chr10 25086147 25086186 -115230579 + (TG)n Simple_repeat Simple_repeat 2 40 0 832 193 9 57 chr10 25086187 25086505 -115230260 - L1MA4A LINE L1 -29 6274 5911 977 274 82 16 chr10 25087470 25087849 -115228916 + LTR33 LTR ERVL 102 505 -16 266 343 75 49 chr10 25087870 25088322 -115228443 + L2 LINE L2 2412 2875 -439 234 313 68 41 chr10 25088575 25088722 -115228043 + L2 LINE L2 3080 3230 -42 2340 87 13 3 chr10 25088901 25089200 -115227565 - AluSq SINE Alu -11 302 1 2337 103 0 0 chr10 25089418 25089718 -115227047 - AluSx SINE Alu -12 300 1 2157 111 31 0 chr10 25090210 25090499 -115226266 + AluSx SINE Alu 1 298 -14 721 217 70 0 chr10 25092601 25092758 -115224007 + MER3 DNA MER1_type 2 122 -87 335 100 0 73 chr10 25092758 25092868 -115223897 + (TTTAA)n Simple_repeat Simple_repeat 3 104 0 381 177 0 25 chr10 25092875 25092954 -115223811 + MER3 DNA MER1_type 131 207 -2 837 165 71 39 chr10 25093299 25093481 -115223284 + MIR SINE MIR 41 228 -34 2287 80 20 3 chr10 25093524 25093824 -115222941 - AluSx SINE Alu -5 307 3 1653 191 154 12 chr10 25094501 25094909 -115221856 + MLT1C LTR MaLR 1 466 -1 2179 139 0 0 chr10 25095010 25095311 -115221454 + AluSx SINE Alu 1 301 -11 581 223 129 20 chr10 25095355 25095557 -115221208 - MIR SINE MIR -9 253 30 500 328 80 10 chr10 25095601 25095802 -115220963 - MIR SINE MIR -33 229 15 21 0 0 0 chr10 25096792 25096813 -115219952 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 25097037 25097066 -115219699 + AT_rich Low_complexity Low_complexity 1 29 0 327 273 197 25 chr10 25097080 25097144 -115219621 - MIR SINE MIR -27 235 183 6417 130 16 7 chr10 25097144 25098058 -115218707 - MER49 LTR ERV1 0 923 1 327 273 197 25 chr10 25098058 25098191 -115218574 - MIR SINE MIR -79 183 4 1423 199 40 59 chr10 25098253 25098500 -115218265 + Charlie1 DNA MER1_type 2349 2586 -175 1159 137 106 70 chr10 25098500 25098558 -115218207 + MER46A DNA MER2_type 1 55 -2676 1758 137 74 0 chr10 25098558 25098828 -115217937 - AluSx SINE Alu -17 295 6 1159 137 106 70 chr10 25098828 25098996 -115217769 + MER46A DNA MER2_type 55 235 -1 1423 199 40 59 chr10 25098996 25099169 -115217596 + Charlie1 DNA MER1_type 2586 2761 0 201 39 0 0 chr10 25099273 25099299 -115217466 + (T)n Simple_repeat Simple_repeat 1 26 0 511 241 148 42 chr10 25099573 25099789 -115216976 - MIR SINE MIR -1 261 23 1944 119 40 0 chr10 25100521 25100837 -115215928 - AluSx SINE Alu 0 312 1 447 219 93 20 chr10 25101343 25101494 -115215271 - MIR SINE MIR -9 253 92 330 111 0 83 chr10 25101974 25102046 -115214719 - MSTA LTR MaLR 0 426 361 2328 147 55 0 chr10 25102078 25102458 -115214307 - MSTA LTR MaLR -27 401 1 2422 93 3 0 chr10 25103008 25103319 -115213446 + AluSp SINE Alu 1 312 -1 224 200 30 44 chr10 25103743 25103878 -115212887 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 25103903 25104009 -115212756 - L1M1 LINE L1 -4576 3170 3061 2272 109 0 6 chr10 25104009 25104321 -115212444 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 25104321 25104474 -115212291 - L1M1 LINE L1 -4685 3061 2851 * 4859 220 50 66 chr10 25104464 25106026 -115210739 - L1M4 LINE L1 -1197 4949 3413 2533 55 0 7 chr10 25106026 25106334 -115210431 + AluY SINE Alu 1 306 -5 4859 220 50 66 chr10 25106334 25106460 -115210305 - L1M4 LINE L1 -2733 3413 3287 475 254 52 46 chr10 25107173 25107346 -115209419 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 25107413 25107667 -115209098 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 25107667 25108071 -115208694 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 25108071 25108513 -115208252 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 25108712 25108837 -115207928 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 25108874 25109001 -115207764 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 25109172 25109638 -115207127 - MER39 LTR ERV1 0 707 42 2220 104 3 3 chr10 25109638 25109936 -115206829 + AluSx SINE Alu 1 298 -14 224 200 30 44 chr10 25110373 25110508 -115206257 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 25110533 25110639 -115206126 - L1M1 LINE L1 -4576 3170 3061 2261 112 0 6 chr10 25110639 25110951 -115205814 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 25110951 25111104 -115205661 - L1M1 LINE L1 -4685 3061 2851 * 7174 224 52 95 chr10 25111094 25112656 -115204109 - L1MCa LINE L1 -1197 5229 3602 2517 58 0 7 chr10 25112656 25112964 -115203801 + AluY SINE Alu 1 306 -5 7174 224 52 95 chr10 25112964 25113197 -115203568 - L1MCa LINE L1 -2824 3602 3361 943 53 0 0 chr10 25113197 25113310 -115203455 - AluY SINE Alu -6 305 193 7174 224 52 95 chr10 25113310 25114595 -115202170 - L1MCa LINE L1 -3065 3361 2023 284 0 28 0 chr10 25114595 25114631 -115202134 + (CA)n Simple_repeat Simple_repeat 2 38 0 7174 224 52 95 chr10 25114631 25115014 -115201751 - L1MCa LINE L1 -4403 2023 1639 1794 175 0 7 chr10 25115014 25115306 -115201459 - AluJo SINE Alu -22 290 1 7174 224 52 95 chr10 25115306 25115487 -115201278 - L1MCa LINE L1 -4787 1639 1452 755 185 9 37 chr10 25115487 25115676 -115201089 - MLT1A1 LTR MaLR 0 443 209 664 274 44 68 chr10 25115676 25116016 -115200749 - L1MCa LINE L1 -5689 727 396 446 311 64 17 chr10 25116132 25116367 -115200398 + HERV16 LTR ERVL 2060 2305 -2691 743 167 40 16 chr10 25116519 25116645 -115200120 + FLAM_A SINE Alu 1 129 -4 1646 170 7 14 chr10 25117885 25118167 -115198598 - AluJb SINE Alu -19 293 14 5054 118 8 5 chr10 25118357 25119092 -115197673 + L1PA13 LINE L1 5427 6163 0 801 123 0 72 chr10 25119129 25119267 -115197498 - FLAM_A SINE Alu 0 142 15 1638 158 25 11 chr10 25119704 25119988 -115196777 + AluJo SINE Alu 11 298 -14 1788 249 18 20 chr10 25120103 25120541 -115196224 + L1MC5 LINE L1 5389 5825 -1983 2424 218 142 88 chr10 25120561 25121266 -115195499 + L1MC5 LINE L1 6082 6747 -1214 1212 178 66 56 chr10 25121266 25121553 -115195212 + AluJo SINE Alu 1 290 -22 2424 218 142 88 chr10 25121553 25121774 -115194991 + L1MC5 LINE L1 6747 6955 -1006 1529 189 0 34 chr10 25121774 25122065 -115194700 + AluJb SINE Alu 1 281 -31 819 56 32 8 chr10 25122068 25122193 -115194572 + (GAAA)n Simple_repeat Simple_repeat 2 129 0 2424 218 142 88 chr10 25122193 25122947 -115193818 + L1MC5 LINE L1 6956 7881 -80 358 319 113 61 chr10 25122953 25123182 -115193583 + L1MEc LINE L1 175 415 -5981 2338 90 3 10 chr10 25123411 25123723 -115193042 + AluY SINE Alu 1 310 -1 597 247 23 6 chr10 25123995 25124169 -115192596 + MER104 DNA Tc2 4 180 0 279 331 78 21 chr10 25124207 25124349 -115192416 - L2 LINE L2 -467 2847 2698 410 119 0 0 chr10 25124355 25124414 -115192351 + MSTB LTR MaLR 1 59 -367 818 159 28 88 chr10 25125943 25126228 -115190537 + MER31-int LTR ERV1 1270 1686 -3250 247 260 240 0 chr10 25127093 25127193 -115189572 + L2 LINE L2 3174 3297 -16 219 225 0 0 chr10 25127159 25127199 -115189566 + MIR SINE MIR 219 258 -4 * 2061 179 35 5 chr10 25127364 25127739 -115189026 + MSTB LTR MaLR 41 426 0 1166 322 45 27 chr10 25127758 25128494 -115188271 - L2 LINE L2 -650 2664 1916 382 250 88 36 chr10 25128566 25128758 -115188007 + L1P5 LINE L1 5270 5471 -683 * 5453 163 22 3 chr10 25128739 25130425 -115186340 + L1PA16 LINE L1 4379 6099 -67 520 302 116 35 chr10 25130526 25131019 -115185746 + L1ME4a LINE L1 5578 6110 -11 1849 159 17 0 chr10 25131915 25132217 -115184548 - AluJb SINE Alu -5 307 1 552 281 101 60 chr10 25132389 25132571 -115184194 - MIR SINE MIR -12 250 56 1804 163 13 10 chr10 25132571 25132872 -115183893 - AluJo SINE Alu -10 302 1 552 281 101 60 chr10 25132872 25132906 -115183859 - MIR SINE MIR -206 56 25 1327 84 0 0 chr10 25132943 25133109 -115183656 - AluSg/x SINE Alu -22 288 123 345 186 53 0 chr10 25133109 25133222 -115183543 + (TA)n Simple_repeat Simple_repeat 2 120 0 919 147 0 0 chr10 25133223 25133366 -115183399 - FLAM_C SINE Alu 0 143 1 180 0 0 0 chr10 25134230 25134250 -115182515 + (CA)n Simple_repeat Simple_repeat 2 21 0 379 336 97 55 chr10 25134283 25134500 -115182265 + L2 LINE L2 2866 3091 -181 356 315 34 20 chr10 25134751 25134897 -115181868 + L2 LINE L2 3125 3272 0 771 201 0 0 chr10 25135890 25136064 -115180701 + (TG)n Simple_repeat Simple_repeat 1 174 0 2045 136 0 3 chr10 25136152 25136453 -115180312 - AluSx SINE Alu -12 300 1 498 318 68 51 chr10 25136455 25136810 -115179955 - L1ME3 LINE L1 -273 5889 5523 2309 101 0 0 chr10 25136810 25137106 -115179659 + AluSc SINE Alu 1 296 -13 498 318 68 51 chr10 25137106 25137222 -115179543 - L1ME3 LINE L1 -639 5523 5410 2277 104 0 25 chr10 25137316 25137633 -115179132 - AluSx SINE Alu -3 309 1 211 356 0 39 chr10 25137741 25137845 -115178920 + MIR SINE MIR 6 105 -157 690 264 43 39 chr10 25137890 25138121 -115178644 + MIR SINE MIR 5 236 -26 268 283 31 9 chr10 25138192 25138301 -115178464 - MIR SINE MIR -49 159 47 2159 136 0 10 chr10 25139352 25139662 -115177103 + AluSx SINE Alu 1 307 -5 251 133 79 0 chr10 25139711 25139876 -115176889 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 293 152 48 8 chr10 25139884 25140009 -115176756 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 298 113 49 28 chr10 25140131 25140273 -115176492 + (TA)n Simple_repeat Simple_repeat 2 146 0 10576 24 0 6 chr10 25140280 25142224 -115174541 + L1PA3 LINE L1 4214 6153 -2 376 34 68 62 chr10 25142238 25142415 -115174350 + (TA)n Simple_repeat Simple_repeat 1 178 0 1898 160 0 10 chr10 25142998 25143305 -115173460 + AluJo SINE Alu 1 304 -8 1969 257 36 15 chr10 25143380 25143906 -115172859 + MLT1H1 LTR MaLR 19 555 0 438 290 26 19 chr10 25143914 25144069 -115172696 + L1MB8 LINE L1 5590 5745 -425 669 185 23 7 chr10 25144357 25144628 -115172137 + GA-rich Low_complexity Low_complexity 1 275 0 310 298 24 0 chr10 25144641 25144725 -115172040 + GA-rich Low_complexity Low_complexity 3 88 0 233 287 85 54 chr10 25144862 25144991 -115171774 + L2 LINE L2 3180 3312 -1 2257 51 0 98 chr10 25146647 25147009 -115169756 - AluY SINE Alu 0 311 1 2095 90 53 30 chr10 25147227 25147526 -115169239 + AluSg SINE Alu 1 306 -4 241 333 63 0 chr10 25147653 25147779 -115168986 + L2 LINE L2 3137 3270 -2 549 278 28 59 chr10 25147808 25148063 -115168702 - MIR SINE MIR 0 262 16 506 221 161 93 chr10 25148205 25148572 -115168193 - MLT1J2 LTR MaLR 0 450 59 1897 186 13 23 chr10 25148574 25148961 -115167804 + L1MB8 LINE L1 5795 6177 -1 229 314 42 25 chr10 25148971 25149089 -115167676 + L3 LINE CR1 770 889 -688 2258 115 0 0 chr10 25149370 25149665 -115167100 - AluSx SINE Alu -13 299 5 1397 148 4 37 chr10 25150499 25150743 -115166022 + AluJo SINE Alu 75 310 -2 303 140 0 0 chr10 25150751 25150801 -115165964 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 2168 117 3 3 chr10 25151423 25151721 -115165044 + AluSx SINE Alu 1 298 -14 194 259 138 52 chr10 25151832 25151948 -115164817 + MIR SINE MIR 115 240 -22 1258 204 55 67 chr10 25152397 25152818 -115163947 + MLT1D LTR MaLR 1 416 -89 808 152 7 29 chr10 25152824 25152840 -115163925 - AluJb SINE Alu -176 136 121 189 74 0 0 chr10 25152840 25152867 -115163898 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 808 152 7 29 chr10 25152867 25152988 -115163777 - AluJb SINE Alu -191 121 2 332 152 89 152 chr10 25152991 25153031 -115163734 + MLT1D LTR MaLR 401 442 -63 1969 153 10 0 chr10 25153031 25153331 -115163434 + AluSx SINE Alu 3 305 -7 332 152 89 152 chr10 25153331 25153402 -115163363 + MLT1D LTR MaLR 442 505 0 663 150 0 47 chr10 25153640 25153767 -115162998 + FLAM_A SINE Alu 22 142 0 1064 232 90 12 chr10 25154724 25155047 -115161718 + L1ME3A LINE L1 5602 5949 -221 227 263 166 51 chr10 25155111 25155286 -115161479 + L1ME3A LINE L1 5962 6156 -14 415 295 96 26 chr10 25155360 25155861 -115160904 - L1ME4a LINE L1 0 6121 5586 319 320 41 8 chr10 25156168 25156290 -115160475 + MIR SINE MIR 117 242 -20 1203 286 35 33 chr10 25156642 25157068 -115159697 - MLT1J2 LTR MaLR 0 450 24 246 273 0 0 chr10 25157117 25157172 -115159593 + (TA)n Simple_repeat Simple_repeat 1 55 0 305 265 72 12 chr10 25157173 25157256 -115159509 - L1MC4 LINE L1 -1340 6702 6615 1696 164 29 0 chr10 25158079 25158359 -115158406 + AluJb SINE Alu 4 291 -21 413 233 25 36 chr10 25159637 25159774 -115156991 - MIR SINE MIR -63 145 43 23 0 0 0 chr10 25162209 25162232 -115154533 + GC_rich Low_complexity Low_complexity 1 23 0 501 352 86 12 chr10 25163879 25164206 -115152559 + L2 LINE L2 2422 2772 -542 24 0 0 0 chr10 25164481 25164505 -115152260 + AT_rich Low_complexity Low_complexity 1 24 0 249 276 0 0 chr10 25164669 25164727 -115152038 + L2 LINE L2 3214 3271 -1 1378 285 29 27 chr10 25164940 25165385 -115151380 - MLT1J LTR MaLR -65 446 1 922 256 75 47 chr10 25165596 25165956 -115150809 - MLT1I LTR MaLR -1 408 39 241 176 59 82 chr10 25167033 25167118 -115149647 - AluSc SINE Alu 0 299 217 1707 141 19 0 chr10 25167244 25167513 -115149252 - AluSg SINE Alu -36 274 1 214 347 61 20 chr10 25167642 25167740 -115149025 + L2 LINE L2 3170 3271 -1 1517 153 117 0 chr10 25167843 25168117 -115148648 + AluJb SINE Alu 1 306 -6 230 206 48 0 chr10 25168166 25168229 -115148536 + Charlie7 DNA MER1_type 44 109 -2503 * 372 173 45 60 chr10 25168207 25168340 -115148425 + Charlie7 DNA MER1_type 2437 2567 -45 879 282 66 63 chr10 25168398 25168441 -115148324 + MLT1J LTR MaLR 36 77 -434 4428 29 0 2 chr10 25168441 25168947 -115147818 + L1PA5 LINE L1 5636 6142 -12 198 0 0 0 chr10 25168947 25168969 -115147796 + (TA)n Simple_repeat Simple_repeat 1 22 0 879 282 66 63 chr10 25168975 25169342 -115147423 + MLT1J LTR MaLR 77 447 -64 321 327 128 49 chr10 25169610 25169836 -115146929 - MIR SINE MIR -6 256 13 244 315 0 0 chr10 25170021 25170094 -115146671 + (TA)n Simple_repeat Simple_repeat 2 74 0 248 188 25 25 chr10 25170257 25170337 -115146428 + (TTAA)n Simple_repeat Simple_repeat 4 83 0 1753 174 26 0 chr10 25171359 25171663 -115145102 - AluJb SINE Alu 0 312 1 573 232 33 20 chr10 25171965 25172116 -115144649 - MIR SINE MIR -2 260 108 1265 145 5 10 chr10 25173166 25173373 -115143392 + L1PB3 LINE L1 5946 6151 -3 1071 133 0 16 chr10 25173613 25173801 -115142964 + L1MA4 LINE L1 6115 6299 -1 26 0 0 0 chr10 25173802 25173828 -115142937 + AT_rich Low_complexity Low_complexity 1 26 0 1283 146 163 12 chr10 25173959 25174226 -115142539 - AluSx SINE Alu 0 304 1 521 210 116 55 chr10 25174277 25174458 -115142307 - L1MC4a LINE L1 -1874 5934 5743 1006 151 0 0 chr10 25175092 25175258 -115141507 + FRAM SINE Alu 4 169 -7 587 163 0 0 chr10 25175379 25175471 -115141294 + AluJ/FLAM SINE Alu 6 97 -215 677 176 0 0 chr10 25175597 25175705 -115141060 + FLAM_C SINE Alu 11 118 -25 296 193 0 0 chr10 25175734 25175791 -115140974 + MIR SINE MIR 68 124 -84 189 107 0 0 chr10 25176403 25176431 -115140334 + (GA)n Simple_repeat Simple_repeat 2 29 0 823 192 0 0 chr10 25176457 25176608 -115140157 + FRAM SINE Alu 5 155 -21 378 42 0 0 chr10 25176943 25176991 -115139774 + (TC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr10 25177275 25177307 -115139458 + (TG)n Simple_repeat Simple_repeat 1 32 0 2018 106 0 0 chr10 25177701 25177976 -115138789 + AluSx SINE Alu 1 275 -37 360 0 0 0 chr10 25178351 25178391 -115138374 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 78 0 0 chr10 25179960 25180011 -115136754 + GC_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr10 25180177 25180207 -115136558 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 25180531 25180554 -115136211 + GC_rich Low_complexity Low_complexity 1 23 0 246 195 32 41 chr10 25180720 25180843 -115135922 + (CGG)n Simple_repeat Simple_repeat 1 122 0 228 220 0 0 chr10 25180996 25181055 -115135710 + G-rich Low_complexity Low_complexity 5 63 0 23 0 0 0 chr10 25181251 25181274 -115135491 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 25181968 25181992 -115134773 + AT_rich Low_complexity Low_complexity 1 24 0 340 257 0 67 chr10 25182369 25182474 -115134291 - MIR SINE MIR -80 182 85 212 143 0 0 chr10 25185420 25185455 -115131310 + (CCCCCT)n Simple_repeat Simple_repeat 6 40 0 201 213 0 0 chr10 25194316 25194363 -115122402 + (TA)n Simple_repeat Simple_repeat 2 48 0 26 50 0 0 chr10 25194763 25194803 -115121962 + AT_rich Low_complexity Low_complexity 1 40 0 199 214 129 29 chr10 25196487 25196557 -115120208 + L2 LINE L2 3196 3272 0 470 253 65 65 chr10 25196633 25196819 -115119946 + MLT1H LTR MaLR 106 291 -258 195 296 63 69 chr10 25197081 25197270 -115119495 - L2 LINE L2 -1104 2210 2023 811 192 72 74 chr10 25197270 25197594 -115119171 + L1MA9 LINE L1 5990 6305 -7 1955 151 0 0 chr10 25197613 25197918 -115118847 + AluJb SINE Alu 1 305 -7 1900 156 0 10 chr10 25198317 25198618 -115118147 - AluSx SINE Alu -14 298 1 1598 193 64 64 chr10 25198919 25199352 -115117413 - MLT1C LTR MaLR 0 467 32 207 0 0 0 chr10 25199352 25199375 -115117390 + (TG)n Simple_repeat Simple_repeat 1 23 0 1598 193 64 64 chr10 25199375 25199408 -115117357 - MLT1C LTR MaLR -434 33 1 1971 186 103 5 chr10 25199838 25200263 -115116502 + MLT1C LTR MaLR 1 467 0 414 0 0 0 chr10 25200674 25200720 -115116045 + (GA)n Simple_repeat Simple_repeat 1 46 0 433 241 200 38 chr10 25200969 25201259 -115115506 + L1ME3A LINE L1 981 1317 -4888 295 254 40 24 chr10 25201340 25201485 -115115280 + L1ME3A LINE L1 1352 1499 -4718 853 314 107 34 chr10 25201526 25202223 -115114542 + L1ME3A LINE L1 1997 2714 -3501 287 281 161 35 chr10 25202269 25202635 -115114130 + L1ME3A LINE L1 2933 3252 -2963 1997 132 0 3 chr10 25202635 25202931 -115113834 + AluSx SINE Alu 1 295 -17 287 281 161 35 chr10 25202931 25203155 -115113610 + L1ME3A LINE L1 3252 3597 -2618 1973 96 0 0 chr10 25203812 25204072 -115112693 - AluSg SINE Alu -16 294 35 540 277 145 26 chr10 25204100 25204631 -115112134 + L1ME3A LINE L1 3639 4232 -1983 860 275 123 36 chr10 25204661 25205218 -115111547 + L1ME3A LINE L1 5327 5936 -303 1552 172 20 26 chr10 25206659 25206961 -115109804 - AluJb SINE Alu -12 300 1 21 36 0 0 chr10 25208268 25208296 -115108469 + AT_rich Low_complexity Low_complexity 1 28 0 1651 200 0 17 chr10 25208398 25208698 -115108067 + AluJo SINE Alu 1 295 -17 279 311 193 0 chr10 25208844 25209005 -115107760 - MIR SINE MIR -48 214 23 636 260 61 10 chr10 25209104 25209300 -115107465 + MIR SINE MIR 13 218 -44 1611 149 204 25 chr10 25209559 25209922 -115106843 - MSTA LTR MaLR 0 428 1 437 182 0 0 chr10 25210093 25210159 -115106606 - U4 snRNA snRNA -79 66 1 1404 179 59 0 chr10 25210901 25211174 -115105591 + L1PA16 LINE L1 5873 6161 -5 434 171 0 146 chr10 25211251 25211374 -115105391 + AluJb SINE Alu 86 190 -122 453 121 205 0 chr10 25211374 25211457 -115105308 - AluJ/FLAM SINE Alu -210 102 3 1627 157 33 47 chr10 25211590 25211890 -115104875 - AluJb SINE Alu -15 297 2 13402 65 6 0 chr10 25212642 25214390 -115102375 + L1PA5 LINE L1 741 2498 -3648 376 22 0 0 chr10 25214514 25214559 -115102206 + L1PA5 LINE L1 2521 2565 -3581 22895 44 7 0 chr10 25214559 25218207 -115098558 + L1PA5 LINE L1 2497 6154 0 390 210 30 0 chr10 25218213 25218313 -115098452 + L1ME3A LINE L1 2395 2497 -3649 994 285 89 40 chr10 25218350 25218559 -115098206 + L1ME3A LINE L1 4386 4583 -1581 236 77 26 0 chr10 25218559 25218598 -115098167 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 994 285 89 40 chr10 25218598 25219530 -115097235 + L1ME3A LINE L1 4583 5585 -579 1168 158 86 19 chr10 25219587 25219796 -115096969 - AluJb SINE Alu -22 290 68 481 303 85 72 chr10 25219796 25220186 -115096579 + MLT1J LTR MaLR 73 467 -44 650 297 43 43 chr10 25220222 25220572 -115096193 + L1ME3A LINE L1 5600 5949 -221 1913 177 0 0 chr10 25221490 25221784 -115094981 + AluJo SINE Alu 5 298 -14 270 208 0 0 chr10 25222664 25222717 -115094048 + L1PA13 LINE L1 5522 5574 -587 3357 93 2 14 chr10 25222850 25223336 -115093429 + L1PA13 LINE L1 5676 6155 -8 2242 103 10 0 chr10 25223380 25223680 -115093085 + AluSq SINE Alu 1 303 -10 623 228 27 7 chr10 25223681 25223847 -115092918 + L1ME2 LINE L1 4690 4858 -1288 264 284 68 11 chr10 25223869 25223957 -115092808 - MLT1G1 LTR MaLR -502 93 1 2293 187 66 81 chr10 25223957 25224151 -115092614 + L1ME2 LINE L1 5125 5320 -844 729 170 28 44 chr10 25224151 25224333 -115092432 + L1MB2 LINE L1 5991 6169 -2 2293 187 66 81 chr10 25224333 25224486 -115092279 + L1ME2 LINE L1 5320 5474 -690 2015 91 11 11 chr10 25224486 25224614 -115092151 + AluSg SINE Alu 5 132 -187 2585 47 0 19 chr10 25224614 25224931 -115091834 + AluY SINE Alu 1 311 0 2015 91 11 11 chr10 25224931 25225117 -115091648 + AluSg SINE Alu 131 319 0 2293 187 66 81 chr10 25225117 25225243 -115091522 + L1ME2 LINE L1 5474 5600 -564 2252 111 3 0 chr10 25225243 25225541 -115091224 + AluSx SINE Alu 1 299 -13 3392 82 21 4 chr10 25225542 25226015 -115090750 - L1PA15 LINE L1 -13 6152 5672 2293 187 66 81 chr10 25226015 25226412 -115090353 + L1ME2 LINE L1 5599 5981 -183 448 247 110 13 chr10 25226607 25226761 -115090004 + L1ME2 LINE L1 5987 6155 -9 367 331 22 29 chr10 25226912 25227048 -115089717 + L2 LINE L2 3136 3270 -2 273 305 110 61 chr10 25228269 25228433 -115088332 + L2 LINE L2 3058 3229 -43 30 45 0 0 chr10 25228729 25228773 -115087992 + AT_rich Low_complexity Low_complexity 1 44 0 1289 148 0 28 chr10 25228814 25229030 -115087735 + AluJb SINE Alu 88 297 -15 761 290 104 14 chr10 25229050 25229342 -115087423 + L1MC4a LINE L1 6637 6938 -847 264 157 9 222 chr10 25229383 25229491 -115087274 + MLT1D-int LTR MaLR 568 652 -719 2154 209 39 125 chr10 25229548 25230326 -115086439 + MLT1D-int LTR MaLR 661 1371 0 976 210 19 19 chr10 25230326 25230540 -115086225 + MLT1D LTR MaLR 1 214 -291 764 295 129 29 chr10 25230540 25230788 -115085977 + L1MEc LINE L1 1276 1498 -4717 2193 112 3 7 chr10 25230788 25231093 -115085672 - AluSg SINE Alu -6 304 1 764 295 129 29 chr10 25231093 25232205 -115084560 + L1MEc LINE L1 1498 2739 -3476 1027 110 18 25 chr10 25232226 25232389 -115084376 + AluSp SINE Alu 1 162 -151 1441 72 5 10 chr10 25232502 25232695 -115084070 + AluSp SINE Alu 109 300 -13 1165 206 67 58 chr10 25232697 25232888 -115083877 + L1MEc LINE L1 2753 2941 -3274 1845 171 3 0 chr10 25232888 25233180 -115083585 - AluJb SINE Alu -19 293 1 1165 206 67 58 chr10 25233180 25233454 -115083311 + L1MEc LINE L1 2941 3222 -2993 5440 166 20 9 chr10 25233455 25235362 -115081403 + L1PA15 LINE L1 4247 6165 0 433 207 62 78 chr10 25235374 25235567 -115081198 + L1MEc LINE L1 3206 3395 -2820 744 140 9 0 chr10 25235569 25235676 -115081089 + Tigger3(Golem) DNA MER2_type 1 108 -2921 785 111 21 21 chr10 25235676 25235820 -115080945 + Tigger3(Golem) DNA MER2_type 2285 2428 -601 956 132 7 14 chr10 25235829 25235973 -115080792 - AluJb SINE Alu -27 285 143 3940 112 33 10 chr10 25235974 25236573 -115080192 + Tigger3(Golem) DNA MER2_type 2416 3028 -1 381 229 62 56 chr10 25236585 25236764 -115080001 + L1MEc LINE L1 3406 3585 -2630 1500 90 0 24 chr10 25237937 25238149 -115078616 + AluSq SINE Alu 105 311 -2 1908 163 3 0 chr10 25239805 25240093 -115076672 + AluJo SINE Alu 1 289 -23 279 288 88 28 chr10 25241032 25241295 -115075470 - L1MEd LINE L1 -1235 1255 947 24 53 0 0 chr10 25241360 25241398 -115075367 + AT_rich Low_complexity Low_complexity 1 38 0 340 305 11 21 chr10 25241452 25241547 -115075218 - L2 LINE L2 -1 3312 3219 275 357 54 67 chr10 25241603 25241713 -115075052 - L2 LINE L2 -838 2476 2366 212 0 36 0 chr10 25241713 25241741 -115075024 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 275 357 54 67 chr10 25241741 25241820 -115074945 - L2 LINE L2 -948 2366 2288 2242 104 51 25 chr10 25241820 25242175 -115074590 + THE1B LTR MaLR 1 364 0 275 357 54 67 chr10 25242175 25242298 -115074467 - L2 LINE L2 -1026 2288 2167 2226 102 0 7 chr10 25243201 25243494 -115073271 - AluSq SINE Alu -22 291 1 27 0 0 0 chr10 25243497 25243524 -115073241 + AT_rich Low_complexity Low_complexity 1 27 0 1659 188 10 7 chr10 25245044 25245336 -115071429 - AluJo SINE Alu -19 293 1 1177 275 80 35 chr10 25245372 25245907 -115070858 + L1MCc LINE L1 24 582 -5841 1218 290 102 69 chr10 25245919 25246554 -115070211 + L1MCc LINE L1 464 1128 -5295 1671 196 0 4 chr10 25246554 25246835 -115069930 + AluJb SINE Alu 2 281 -31 1218 290 102 69 chr10 25246835 25246934 -115069831 + L1MCc LINE L1 1128 1222 -5201 201 262 0 0 chr10 25246956 25246998 -115069767 + (TATG)n Simple_repeat Simple_repeat 2 43 0 322 235 47 0 chr10 25247006 25247091 -115069674 + L1MCc LINE L1 1238 1326 -5097 3088 152 77 54 chr10 25297665 25297756 -115019009 - L1MB7 LINE L1 -26 6158 6071 243 0 0 0 chr10 25297756 25297783 -115018982 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1434 184 43 29 chr10 25297785 25297941 -115018824 - AluJo SINE Alu -30 282 119 225 0 0 0 chr10 25297941 25297966 -115018799 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1434 184 43 29 chr10 25297966 25298087 -115018678 - AluJo SINE Alu -193 119 1 3088 152 77 54 chr10 25298087 25298100 -115018665 - L1MB7 LINE L1 -113 6071 6060 1820 172 3 0 chr10 25298100 25298397 -115018368 - AluJb SINE Alu -1 311 14 3088 152 77 54 chr10 25298397 25298952 -115017813 - L1MB7 LINE L1 -124 6060 5480 976 219 0 0 chr10 25298955 25299138 -115017627 - AluJo SINE Alu -12 300 118 207 0 0 0 chr10 25299246 25299269 -115017496 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 230 236 73 0 chr10 25299749 25299804 -115016961 - L2 LINE L2 -4 3268 3210 1963 136 0 17 chr10 25299966 25300268 -115016497 - AluSx SINE Alu -15 297 1 302 311 60 24 chr10 25300325 25300492 -115016273 + MIR SINE MIR 82 254 -8 671 254 75 25 chr10 25300641 25300842 -115015923 + MER57B LTR ERV1 1 211 -223 396 228 25 0 chr10 25301008 25301087 -115015678 - MER21B LTR ERV1 -778 85 5 525 169 0 119 chr10 25301279 25301329 -115015436 - U13 snRNA snRNA 0 104 74 1751 179 10 0 chr10 25301329 25301630 -115015135 - AluJo SINE Alu -5 307 4 525 169 0 119 chr10 25301630 25301697 -115015068 - U13 snRNA snRNA -30 74 1 702 232 14 0 chr10 25302484 25302626 -115014139 + L1ME3A LINE L1 6022 6165 -5 1534 174 3 63 chr10 25302867 25303042 -115013723 - AluJo SINE Alu -14 298 114 198 0 0 0 chr10 25303042 25303064 -115013701 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1996 108 41 0 chr10 25303065 25303333 -115013432 - AluSc SINE Alu -30 279 1 1534 174 3 63 chr10 25303333 25303471 -115013294 - AluJo SINE Alu -197 115 2 1459 94 14 9 chr10 25303648 25303860 -115012905 - L1MA2 LINE L1 0 6304 6092 1728 230 113 62 chr10 25303875 25304389 -115012376 + MLT1F LTR MaLR 1 540 -2 342 194 0 0 chr10 25304423 25304485 -115012280 - MSTA LTR MaLR -1 427 366 279 343 61 0 chr10 25304661 25304760 -115012005 + L2 LINE L2 3168 3272 0 2190 149 136 18 chr10 25304772 25305155 -115011610 - MSTA LTR MaLR 0 428 1 26 50 0 0 chr10 25305520 25305560 -115011205 + AT_rich Low_complexity Low_complexity 1 40 0 885 129 8 0 chr10 25305560 25305684 -115011081 + FLAM_C SINE Alu 1 125 -18 929 148 0 0 chr10 25306110 25306238 -115010527 + AluJo/FLAM SINE Alu 1 128 -174 836 129 0 30 chr10 25306122 25306254 -115010511 + FLAM_C SINE Alu 13 140 -3 351 0 0 0 chr10 25306644 25306683 -115010082 + (TG)n Simple_repeat Simple_repeat 2 40 0 1719 174 31 3 chr10 25306683 25306970 -115009795 - AluJb SINE Alu -17 295 1 22 35 0 0 chr10 25307637 25307666 -115009099 + AT_rich Low_complexity Low_complexity 1 29 0 804 178 0 0 chr10 25307707 25307836 -115008929 - AluJb SINE Alu -183 129 1 1032 112 0 0 chr10 25307869 25308012 -115008753 + L1PB1 LINE L1 6008 6150 -1 189 0 0 0 chr10 25308219 25308240 -115008525 + (CA)n Simple_repeat Simple_repeat 1 21 0 2594 134 7 19 chr10 25308355 25308772 -115007993 - MER50 LTR ERV1 -321 413 2 345 289 67 0 chr10 25308773 25308877 -115007888 + MER34B LTR ERV1 452 562 -3 303 311 25 19 chr10 25308904 25309065 -115007700 - LTR23 LTR ERV1 0 437 276 1753 152 0 62 chr10 25309068 25309390 -115007375 + AluJo SINE Alu 1 302 -10 1355 145 18 26 chr10 25309417 25309645 -115007120 - L1PA16 LINE L1 0 6166 5941 1080 151 73 5 chr10 25309748 25309954 -115006811 + MSTB1 LTR MaLR 213 432 0 895 192 5 96 chr10 25310126 25310257 -115006508 - MER5A DNA MER1_type 0 189 82 1770 169 36 0 chr10 25310257 25310558 -115006207 - AluSx SINE Alu 0 312 1 895 192 5 96 chr10 25310558 25310634 -115006131 - MER5A DNA MER1_type -107 82 1 744 266 107 60 chr10 25310710 25311225 -115005540 - MER34 LTR ERV1 -3 539 1 319 246 109 18 chr10 25311258 25311368 -115005397 - MIR SINE MIR -51 211 92 1822 122 0 8 chr10 25311632 25311887 -115004878 - AluSq SINE Alu -60 253 1 570 180 0 36 chr10 25312043 25312154 -115004611 + FLAM_C SINE Alu 37 143 0 25 51 0 0 chr10 25312784 25312823 -115003942 + AT_rich Low_complexity Low_complexity 1 39 0 1465 163 0 4 chr10 25312846 25313085 -115003680 + AluJo SINE Alu 75 312 0 495 33 0 0 chr10 25313715 25313776 -115002989 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1827 160 33 0 chr10 25313801 25313978 -115002787 - AluSx SINE Alu -2 310 117 207 114 0 0 chr10 25313978 25314013 -115002752 + (TG)n Simple_repeat Simple_repeat 2 36 0 1827 160 33 0 chr10 25314013 25314135 -115002630 - AluSx SINE Alu -195 117 1 222 37 0 0 chr10 25314659 25314686 -115002079 + (CA)n Simple_repeat Simple_repeat 2 28 0 854 195 19 0 chr10 25314714 25314868 -115001897 - AluJb SINE Alu -24 288 132 1815 133 3 67 chr10 25314871 25315186 -115001579 - AluSx SINE Alu -17 295 1 3484 178 11 40 chr10 25315503 25316221 -115000544 - Tigger5 DNA MER2_type -647 1676 980 1184 211 0 5 chr10 25316228 25316441 -115000324 - AluJo SINE Alu -100 212 1 475 202 22 0 chr10 25316453 25316542 -115000223 - Tigger5 DNA MER2_type -2232 91 1 2154 134 3 10 chr10 25316771 25317078 -114999687 + AluSx SINE Alu 1 305 -7 238 340 54 27 chr10 25317375 25317560 -114999205 + LTR67 LTR ERVL 64 253 -304 248 273 121 10 chr10 25317663 25317762 -114999003 + LTR67 LTR ERVL 445 554 -3 715 227 0 0 chr10 25318275 25318416 -114998349 + FLAM_C SINE Alu 2 142 -1 828 121 171 0 chr10 25319259 25319399 -114997366 + MSTA LTR MaLR 1 164 -264 853 166 6 6 chr10 25319505 25319662 -114997103 + FRAM SINE Alu 20 176 0 1681 186 7 13 chr10 25319904 25320210 -114996555 - AluJo SINE Alu -7 305 2 4002 113 51 10 chr10 25320339 25320925 -114995840 + MER4B LTR ERV1 1 610 0 22 56 0 0 chr10 25320965 25321001 -114995764 + AT_rich Low_complexity Low_complexity 1 36 0 270 0 0 0 chr10 25321578 25321608 -114995157 + (A)n Simple_repeat Simple_repeat 1 30 0 1141 157 0 16 chr10 25321608 25321799 -114994966 + AluSp SINE Alu 121 308 -5 200 122 24 0 chr10 25322511 25322552 -114994213 + (TG)n Simple_repeat Simple_repeat 1 42 0 2233 119 28 14 chr10 25322964 25323316 -114993449 - MER21A LTR ERV1 0 931 575 21 0 0 0 chr10 25323664 25323685 -114993080 + AT_rich Low_complexity Low_complexity 1 21 0 205 146 0 42 chr10 25324279 25324322 -114992443 + (TA)n Simple_repeat Simple_repeat 1 42 0 2192 117 0 10 chr10 25324322 25324621 -114992144 - AluSq SINE Alu -17 296 1 992 199 0 25 chr10 25324642 25324843 -114991922 - AluJ SINE Alu -1 311 116 327 197 15 15 chr10 25325738 25325804 -114990961 + AluJ/FLAM SINE Alu 1 66 -236 551 111 0 0 chr10 25325904 25325985 -114990780 + AluY SINE Alu 201 281 -30 3685 145 9 14 chr10 25325999 25326580 -114990185 - MER50 LTR ERV1 -156 578 1 875 165 0 15 chr10 25326606 25326739 -114990026 - AluJ SINE Alu -171 131 1 391 300 8 8 chr10 25326902 25327032 -114989733 - L3b LINE CR1 -352 1231 1102 402 162 0 29 chr10 25327239 25327307 -114989458 + AluJ/FLAM SINE Alu 3 68 -244 975 169 5 50 chr10 25327415 25327465 -114989300 - Charlie1 DNA MER1_type -199 2562 2511 1888 142 3 39 chr10 25327465 25327774 -114988991 + AluJb SINE Alu 1 298 -14 975 169 5 50 chr10 25327774 25327924 -114988841 - Charlie1 DNA MER1_type -250 2511 2371 286 314 0 0 chr10 25327929 25327999 -114988766 - Charlie1 DNA MER1_type -2690 71 2 270 280 92 46 chr10 25328024 25328242 -114988523 - L2 LINE L2 -1155 2159 1932 188 33 0 33 chr10 25328424 25328454 -114988311 + (TTG)n Simple_repeat Simple_repeat 2 30 0 817 141 31 0 chr10 25328454 25328577 -114988188 - FRAM SINE Alu -26 150 24 1297 228 92 42 chr10 25328590 25329016 -114987749 + MLT1J LTR MaLR 65 511 0 1717 162 13 36 chr10 25329169 25329477 -114987288 + AluJb SINE Alu 1 301 -11 381 282 67 41 chr10 25329528 25329723 -114987042 + LTR33 LTR ERVL 1 200 -321 383 190 0 153 chr10 25329838 25329899 -114986866 + LTR33 LTR ERVL 405 435 -86 892 140 0 22 chr10 25329899 25330035 -114986730 - FLAM_C SINE Alu 0 133 1 383 190 0 153 chr10 25330035 25330110 -114986655 + LTR33 LTR ERVL 435 520 -1 194 328 90 33 chr10 25330111 25330233 -114986532 - L2 LINE L2 -2065 1249 1121 246 32 0 0 chr10 25330463 25330494 -114986271 + (T)n Simple_repeat Simple_repeat 1 31 0 944 150 0 0 chr10 25330494 25330627 -114986138 - AluSq/x SINE Alu -180 133 1 774 169 0 0 chr10 25330867 25330985 -114985780 + FLAM_C SINE Alu 1 118 -15 180 0 0 0 chr10 25330988 25331008 -114985757 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 404 207 134 177 chr10 25331159 25331391 -114985374 - MIR SINE MIR -21 241 20 3332 211 78 21 chr10 25331817 25332217 -114984548 + MER45B DNA AcHobo 4 380 -660 2700 197 50 4 chr10 25332217 25332735 -114984030 + MER34 LTR ERV1 1 542 0 3332 211 78 21 chr10 25332735 25333088 -114983677 + MER45B DNA AcHobo 380 800 -240 22 56 0 0 chr10 25333198 25333234 -114983531 + AT_rich Low_complexity Low_complexity 1 36 0 249 169 56 70 chr10 25333234 25333305 -114983460 - MER41B LTR ERV1 -121 514 445 734 81 0 0 chr10 25333324 25333410 -114983355 - AluSp/q SINE Alu -29 284 199 1519 207 0 17 chr10 25333751 25334050 -114982715 + AluSx SINE Alu 1 294 -18 526 178 0 11 chr10 25334198 25334288 -114982477 + AluJ SINE Alu 29 117 -195 1029 189 37 0 chr10 25334300 25334491 -114982274 + MER45B DNA AcHobo 842 1039 -1 950 210 46 25 chr10 25334867 25335105 -114981660 - MER90 LTR ERV1 -8 606 364 948 171 0 0 chr10 25335129 25335287 -114981478 - FRAM SINE Alu -1 175 18 607 304 33 8 chr10 25335294 25335537 -114981228 - MER90 LTR ERV1 -316 259 11 1979 165 0 0 chr10 25335570 25335873 -114980892 - AluJb SINE Alu -9 303 1 1010 172 5 30 chr10 25335941 25336165 -114980600 + AluJ SINE Alu 118 312 0 863 195 0 58 chr10 25336815 25336989 -114979776 + AluJo SINE Alu 22 185 -127 2556 151 38 31 chr10 25337123 25337548 -114979217 - MSTC LTR MaLR 0 428 1 2999 193 35 7 chr10 25337737 25338282 -114978483 - MER68 LTR ERV1 0 562 3 708 172 31 8 chr10 25338451 25338579 -114978186 + AluJ SINE Alu 1 131 -171 21 71 0 0 chr10 25339022 25339064 -114977701 + AT_rich Low_complexity Low_complexity 1 42 0 200 179 51 0 chr10 25339191 25339230 -114977535 + L2 LINE L2 3010 3050 -222 209 341 71 0 chr10 25339869 25339954 -114976811 + MIR SINE MIR 23 113 -95 387 303 67 0 chr10 25339954 25340073 -114976692 - L2 LINE L2 0 3313 3187 825 170 80 37 chr10 25340560 25340748 -114976017 + AluJ SINE Alu 117 312 0 1263 177 57 21 chr10 25340767 25340878 -114975887 + AluJb SINE Alu 9 115 -197 222 37 0 0 chr10 25340878 25340905 -114975860 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1263 177 57 21 chr10 25340905 25341075 -114975690 + AluJb SINE Alu 115 300 -12 29 47 0 0 chr10 25341364 25341407 -114975358 + GC_rich Low_complexity Low_complexity 1 43 0 216 196 0 0 chr10 25343177 25343223 -114973542 + T-rich Low_complexity Low_complexity 1 46 0 204 125 0 0 chr10 25343813 25343845 -114972920 + (TTA)n Simple_repeat Simple_repeat 3 34 0 771 139 7 44 chr10 25343899 25344036 -114972729 - FRAM SINE Alu -44 132 1 282 313 111 35 chr10 25344162 25344306 -114972459 + L2 LINE L2 2895 3049 -223 513 169 0 11 chr10 25344741 25344830 -114971935 + MER4A LTR ERV1 1 88 -576 1360 142 23 28 chr10 25344840 25345143 -114971622 + MER4A LTR ERV1 261 620 -44 2031 157 0 0 chr10 25345143 25345455 -114971310 - AluSx SINE Alu 0 312 1 3874 147 43 6 chr10 25345456 25346077 -114970688 - MER4D LTR ERV1 -259 644 1 183 100 0 0 chr10 25346198 25346228 -114970537 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 1612 185 3 3 chr10 25346231 25346518 -114970247 - AluJo SINE Alu -25 287 1 21 0 0 0 chr10 25346520 25346541 -114970224 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr10 25346603 25346642 -114970123 + AT_rich Low_complexity Low_complexity 1 39 0 2284 86 0 7 chr10 25346844 25347173 -114969592 - AluY SINE Alu 0 311 1 231 114 0 0 chr10 25347456 25347491 -114969274 + (TC)n Simple_repeat Simple_repeat 1 35 0 389 295 94 13 chr10 25347800 25347949 -114968816 - MIR3 SINE MIR -11 197 37 425 285 108 0 chr10 25348339 25348497 -114968268 - MER112 DNA MER1_type -6 254 80 516 32 0 0 chr10 25348670 25348732 -114968033 + (TG)n Simple_repeat Simple_repeat 2 63 0 914 199 11 6 chr10 25348734 25348910 -114967855 - MER20 DNA MER1_type 0 219 43 1667 165 7 13 chr10 25348977 25349280 -114967485 - AluJo SINE Alu -11 301 1 1784 172 0 10 chr10 25349289 25349586 -114967179 - AluJo SINE Alu -13 299 6 2039 212 77 18 chr10 25349806 25350245 -114966520 - MER21B LTR ERV1 -11 852 388 583 183 66 36 chr10 25350291 25350428 -114966337 - MER21B LTR ERV1 -636 227 87 1527 180 0 4 chr10 25350429 25350684 -114966081 + AluJo SINE Alu 21 274 -38 366 257 81 15 chr10 25350943 25351079 -114965686 + L1ME LINE L1 5501 5645 -476 409 307 9 0 chr10 25351197 25351311 -114965454 - L2 LINE L2 -3 3269 3155 593 179 10 2 chr10 25351398 25351604 -114965161 + AluJo SINE Alu 21 275 -37 204 67 0 0 chr10 25351614 25351644 -114965121 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 832 200 31 19 chr10 25351819 25351979 -114964786 - AluJo SINE Alu -30 282 121 1386 167 19 68 chr10 25352038 25352349 -114964416 - AluJo SINE Alu -12 300 5 2489 87 0 0 chr10 25352368 25352678 -114964087 - AluSg SINE Alu 0 310 1 896 150 0 0 chr10 25353172 25353305 -114963460 + FLAM_C SINE Alu 1 133 0 341 247 41 21 chr10 25353456 25353553 -114963212 - MIR SINE MIR -11 251 153 372 212 182 30 chr10 25353554 25353686 -114963079 - MIR SINE MIR -64 198 47 321 218 173 23 chr10 25353795 25353928 -114962837 - MIR3 SINE MIR -23 185 33 254 234 0 0 chr10 25354019 25354066 -114962699 + FLAM_A SINE Alu 2 48 -85 1982 98 11 3 chr10 25354755 25355060 -114961705 - AluSx SINE Alu 0 307 1 22 56 0 0 chr10 25355440 25355476 -114961289 + AT_rich Low_complexity Low_complexity 1 36 0 282 300 0 0 chr10 25356013 25356103 -114960662 + MIR SINE MIR 63 152 -110 2175 133 0 0 chr10 25356260 25356562 -114960203 + AluSx SINE Alu 1 302 -10 1724 154 23 39 chr10 25357781 25358086 -114958679 - AluJo SINE Alu -12 300 1 246 272 22 54 chr10 25358309 25358401 -114958364 + LTR67 LTR ERVL 454 542 -15 2114 231 104 113 chr10 25358414 25358835 -114957930 - HAL1 LINE L1 -906 1601 1178 2130 127 27 0 chr10 25358835 25359134 -114957631 - AluSx SINE Alu -5 307 1 2114 231 104 113 chr10 25359134 25360189 -114956576 - HAL1 LINE L1 -1329 1178 139 234 0 0 0 chr10 25360296 25360322 -114956443 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1993 137 7 10 chr10 25360341 25360648 -114956117 - AluSx SINE Alu -6 306 1 1553 182 0 52 chr10 25360885 25360999 -114955766 - AluJo SINE Alu -20 292 174 2914 77 8 0 chr10 25360999 25361351 -114955414 + THE1A LTR MaLR 1 355 0 1553 182 0 52 chr10 25361351 25361544 -114955221 - AluJo SINE Alu -138 174 1 525 340 44 6 chr10 25362638 25362867 -114953898 + MIR SINE MIR 4 237 -25 349 369 83 30 chr10 25362892 25363323 -114953442 + L2 LINE L2 2009 2462 -852 1192 186 68 79 chr10 25363964 25364330 -114952435 + MLT1A1 LTR MaLR 1 362 -3 1682 168 3 47 chr10 25364805 25365127 -114951638 - AluJb SINE Alu -4 308 1 1574 176 10 36 chr10 25365151 25365458 -114951307 - AluJo SINE Alu -13 299 1 209 250 36 83 chr10 25365854 25365917 -114950848 + L2 LINE L2 3193 3253 -19 1919 149 7 10 chr10 25365917 25366085 -114950680 - AluSx SINE Alu -11 301 133 2060 112 3 17 chr10 25366085 25366409 -114950356 - AluSc SINE Alu 0 309 1 1919 149 7 10 chr10 25366409 25366542 -114950223 - AluSx SINE Alu -179 133 1 209 250 36 83 chr10 25366542 25366562 -114950203 + L2 LINE L2 3253 3272 0 2093 89 17 3 chr10 25367283 25367574 -114949191 + AluSq SINE Alu 1 295 -18 273 312 25 64 chr10 25367813 25367970 -114948795 + MIR SINE MIR 112 262 0 719 210 12 42 chr10 25368086 25368253 -114948512 + FRAM SINE Alu 1 156 -20 1864 160 23 7 chr10 25368572 25368878 -114947887 + AluJo SINE Alu 1 311 -1 3028 171 23 37 chr10 25369165 25369586 -114947179 - Tigger5 DNA MER2_type 0 2323 1911 1649 122 191 7 chr10 25369586 25369890 -114946875 - MER46B DNA MER2_type -1 235 1 3028 171 23 37 chr10 25369890 25370069 -114946696 - Tigger5 DNA MER2_type -412 1911 1731 3147 130 16 36 chr10 25370079 25370123 -114946642 - L1PA16 LINE L1 0 6166 6123 1856 131 45 17 chr10 25370123 25370413 -114946352 + AluSx SINE Alu 1 298 -14 3147 130 16 36 chr10 25370413 25370869 -114945896 - L1PA16 LINE L1 -43 6123 5676 973 206 65 67 chr10 25370972 25371388 -114945377 - MER21A LTR ERV1 -422 441 1 1804 187 132 127 chr10 25371388 25371622 -114945143 + LTR8A LTR ERV1 42 273 -454 2083 117 0 4 chr10 25371622 25371923 -114944842 - AluSx SINE Alu 0 310 11 1804 187 132 127 chr10 25371923 25372370 -114944395 + LTR8A LTR ERV1 273 727 0 189 356 200 0 chr10 25372375 25372465 -114944300 - L2 LINE L2 -31 3241 3134 2090 152 18 3 chr10 25372494 25372829 -114943936 - LTR26B LTR ERV1 0 531 192 936 111 19 0 chr10 25372833 25372995 -114943770 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 786 168 16 8 chr10 25372995 25373120 -114943645 - AluJb SINE Alu -52 260 135 1383 47 37 88 chr10 25373120 25373335 -114943430 - LTR26B LTR ERV1 -327 204 1 1975 137 6 51 chr10 25373387 25373701 -114943064 + AluSx SINE Alu 1 300 -12 3060 128 14 0 chr10 25373840 25374261 -114942504 + MSTA LTR MaLR 1 427 -1 1088 199 94 26 chr10 25374414 25374680 -114942085 - L1MB7 LINE L1 -19 6165 5882 783 207 0 21 chr10 25375324 25375464 -114941301 + AluJo SINE Alu 3 139 -173 1825 146 0 11 chr10 25375466 25375746 -114941019 + AluJo SINE Alu 11 287 -25 580 188 21 0 chr10 25375772 25375868 -114940897 + AluJ/FLAM SINE Alu 2 99 -213 886 161 0 19 chr10 25375868 25376023 -114940742 + AluJo/FRAM SINE Alu 161 312 0 1450 147 77 63 chr10 25376547 25376846 -114939919 + AluJb SINE Alu 1 303 -9 2296 90 0 3 chr10 25376941 25377240 -114939525 - AluSg SINE Alu -12 298 1 1409 187 41 41 chr10 25377409 25377703 -114939062 + MER50 LTR ERV1 418 711 -23 * 1993 142 72 70 chr10 25377699 25377785 -114938980 - MER34C LTR ERV1 -105 480 396 2172 124 0 3 chr10 25377785 25378092 -114938673 + AluSc SINE Alu 1 306 -3 1993 142 72 70 chr10 25378092 25378113 -114938652 - MER34C LTR ERV1 -189 396 377 2334 171 25 2 chr10 25378113 25378506 -114938259 + MER57A LTR ERV1 2 403 0 1993 142 72 70 chr10 25378506 25378840 -114937925 - MER34C LTR ERV1 -208 377 37 345 24 0 0 chr10 25378990 25379032 -114937733 + (TG)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr10 25379031 25379051 -114937714 + (CG)n Simple_repeat Simple_repeat 2 21 0 * 225 296 28 0 chr10 25379079 25379150 -114937615 - MER5B DNA MER1_type -99 79 7 3508 150 45 20 chr10 25379318 25379336 -114937429 - LTR26E LTR ERV1 -2 620 604 1599 152 117 72 chr10 25379336 25379765 -114937000 - LTR7 LTR ERV1 -2 448 1 3508 150 45 20 chr10 25379765 25380351 -114936414 - LTR26E LTR ERV1 -18 604 1 252 241 0 0 chr10 25380617 25380671 -114936094 - MLT1K LTR MaLR -3 585 532 468 165 0 13 chr10 25380796 25380875 -114935890 + MSTB LTR MaLR 1 78 -348 5652 72 15 0 chr10 25380875 25381556 -114935209 + LTR8 LTR ERV1 1 691 0 2465 69 0 0 chr10 25381799 25382103 -114934662 + AluY SINE Alu 1 304 -7 1720 173 30 7 chr10 25382119 25382414 -114934351 + AluJo SINE Alu 5 306 -6 809 257 126 5 chr10 25382414 25382628 -114934137 + MIR SINE MIR 22 261 -1 2045 132 0 10 chr10 25382671 25383007 -114933758 + AluSx SINE Alu 1 333 0 2044 124 0 3 chr10 25383015 25383342 -114933423 + AluSx SINE Alu 1 326 0 1819 113 106 3 chr10 25384121 25384404 -114932361 + AluSx SINE Alu 1 312 0 817 119 24 0 chr10 25384422 25384548 -114932217 + L1MA5A LINE L1 6165 6293 -4 3746 193 20 61 chr10 25384787 25384821 -114931944 - L1MB8 LINE L1 0 6178 6144 2404 74 0 7 chr10 25384821 25385120 -114931645 + AluSq SINE Alu 1 297 -16 3746 193 20 61 chr10 25385120 25385652 -114931113 - L1MB8 LINE L1 -34 6144 5591 2266 113 0 3 chr10 25385652 25385953 -114930812 + AluSx SINE Alu 1 300 -12 3746 193 20 61 chr10 25385953 25386110 -114930655 - L1MB8 LINE L1 -587 5591 5497 1061 120 78 51 chr10 25386110 25386327 -114930438 - L1MB8 LINE L1 -11 6167 5945 3746 193 20 61 chr10 25386327 25386518 -114930247 - L1MB8 LINE L1 -681 5497 5300 1510 207 3 10 chr10 25386520 25386834 -114929931 - AluJb SINE Alu 0 312 1 839 196 8 0 chr10 25386834 25386967 -114929798 - AluJo SINE Alu -177 135 2 297 161 65 0 chr10 25386978 25387040 -114929725 - L1MB8 LINE L1 -856 5290 5225 253 222 14 28 chr10 25387935 25388007 -114928758 + GA-rich Low_complexity Low_complexity 6 76 0 1648 156 3 63 chr10 25388422 25388737 -114928028 + AluJo SINE Alu 15 310 -2 2246 199 74 31 chr10 25389008 25389343 -114927422 - MER97a DNA MER1_type? -11 883 511 1841 116 48 24 chr10 25389343 25389636 -114927129 + AluSq SINE Alu 1 300 -13 2246 199 74 31 chr10 25389636 25389882 -114926883 - MER97a DNA MER1_type? -383 511 277 921 176 176 70 chr10 25389891 25390163 -114926602 + AluJo SINE Alu 8 308 -4 2184 109 0 32 chr10 25390181 25390492 -114926273 + AluSq SINE Alu 1 301 -12 558 259 119 13 chr10 25390492 25390728 -114926037 - MER97a DNA MER1_type? -613 281 21 1854 163 10 7 chr10 25390855 25391150 -114925615 - AluJo SINE Alu -11 301 6 1380 189 21 60 chr10 25391196 25391345 -114925420 + AluJo SINE Alu 1 135 -177 2239 115 3 0 chr10 25391345 25391641 -114925124 + AluSq SINE Alu 1 297 -16 1380 189 21 60 chr10 25391641 25391776 -114924989 + AluJo SINE Alu 135 274 -38 335 152 0 15 chr10 25391789 25391855 -114924910 + GA-rich Low_complexity Low_complexity 4 68 0 1431 157 0 0 chr10 25391867 25392084 -114924681 + AluJb SINE Alu 87 303 -9 2810 134 4 47 chr10 25392196 25392665 -114924100 + MER41B LTR ERV1 1 449 -186 1861 139 31 7 chr10 25392666 25392953 -114923812 + AluSx SINE Alu 1 294 -18 547 147 0 0 chr10 25392958 25393053 -114923712 + (GGGAA)n Simple_repeat Simple_repeat 3 97 0 204 289 0 26 chr10 25393163 25393239 -114923526 + MER5A DNA MER1_type 65 138 -51 2201 117 10 0 chr10 25393330 25393628 -114923137 + AluSg SINE Alu 1 301 -9 220 295 47 87 chr10 25393848 25393997 -114922768 + MER5A DNA MER1_type 47 189 0 367 284 55 24 chr10 25394006 25394133 -114922632 - MIR SINE MIR 0 262 132 1830 175 7 10 chr10 25394362 25394815 -114921950 + AluJo SINE Alu 1 452 0 300 283 42 58 chr10 25395532 25395652 -114921113 - MIR SINE MIR -142 120 3 2115 136 7 0 chr10 25395725 25396033 -114920732 + AluSg SINE Alu 1 310 0 1735 96 0 40 chr10 25396628 25396878 -114919887 + L1MA4A LINE L1 6045 6284 -19 520 358 118 0 chr10 25397017 25397313 -114919452 + L2 LINE L2 2520 2850 -464 2576 125 17 6 chr10 25397340 25397700 -114919065 - THE1B LTR MaLR 0 364 1 243 29 0 29 chr10 25398028 25398063 -114918702 + L1MA6 LINE L1 6114 6147 -153 1640 165 18 21 chr10 25398260 25398545 -114918220 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr10 25398994 25399014 -114917751 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1863 171 3 7 chr10 25399327 25399625 -114917140 - AluJo SINE Alu -15 297 1 261 119 0 0 chr10 25399914 25399956 -114916809 + (A)n Simple_repeat Simple_repeat 1 42 0 1878 123 98 0 chr10 25400041 25400302 -114916463 + AluSg SINE Alu 1 292 -18 240 35 0 0 chr10 25400302 25400331 -114916434 + (CA)n Simple_repeat Simple_repeat 2 30 0 1878 123 98 0 chr10 25400331 25400346 -114916419 + AluSg SINE Alu 292 304 -6 385 336 89 21 chr10 25400577 25400812 -114915953 + L2 LINE L2 2252 2502 -812 315 312 42 38 chr10 25400828 25401042 -114915723 + L2 LINE L2 2775 2986 -286 906 200 29 54 chr10 25401195 25401400 -114915365 - MLT1B LTR MaLR 0 390 191 441 138 0 0 chr10 25401407 25401487 -114915278 + (GA)n Simple_repeat Simple_repeat 1 80 0 1796 128 54 27 chr10 25401525 25401822 -114914943 - AluJo SINE Alu -7 305 1 682 136 79 102 chr10 25401825 25401892 -114914873 - MLT1B LTR MaLR -217 173 106 2399 89 3 0 chr10 25401892 25402194 -114914571 - AluSq SINE Alu -10 303 1 682 136 79 102 chr10 25402194 25402303 -114914462 - MLT1B LTR MaLR -284 106 1 330 256 184 8 chr10 25402304 25402429 -114914336 + L2 LINE L2 3167 3313 0 701 222 46 75 chr10 25402474 25402713 -114914052 - MIR SINE MIR -22 240 9 27 0 0 0 chr10 25402751 25402778 -114913987 + AT_rich Low_complexity Low_complexity 1 27 0 503 278 95 27 chr10 25402785 25403048 -114913717 - L2 LINE L2 -2 3311 3031 2255 79 0 30 chr10 25404758 25405061 -114911704 + AluSp SINE Alu 1 294 -19 2109 186 180 36 chr10 25405061 25405679 -114911086 - MER39 LTR ERV1 0 707 1 2566 162 34 134 chr10 25405679 25405825 -114910940 + L1MB7 LINE L1 5189 5348 -836 1410 196 85 0 chr10 25405825 25406106 -114910659 + AluJb SINE Alu 4 308 -4 2566 162 34 134 chr10 25406106 25406465 -114910300 + L1MB7 LINE L1 5348 5586 -598 1927 152 0 34 chr10 25406465 25406788 -114909977 - AluSx SINE Alu 0 312 1 2566 162 34 134 chr10 25406788 25407093 -114909672 + L1MB7 LINE L1 5586 5920 -264 1722 171 0 24 chr10 25407504 25407802 -114908963 + AluJo SINE Alu 1 291 -21 2410 143 11 3 chr10 25408173 25408536 -114908229 - MER47A DNA MER2_type 0 366 1 811 143 9 0 chr10 25409656 25409768 -114906997 + AluJb SINE Alu 6 118 -194 967 220 0 0 chr10 25409872 25410031 -114906734 - FAM SINE Alu -16 159 1 430 289 78 32 chr10 25410086 25410456 -114906309 - L1MC4 LINE L1 -212 7830 7444 854 94 8 24 chr10 25410666 25410793 -114905972 + FRAM SINE Alu 22 146 -30 180 0 0 0 chr10 25410801 25410821 -114905944 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1686 137 48 11 chr10 25410834 25411126 -114905639 + AluJo SINE Alu 12 313 0 1182 185 69 0 chr10 25411411 25411627 -114905138 - MLT1A1 LTR MaLR -3 362 132 201 139 0 0 chr10 25411628 25411640 -114905125 + (GAAAA)n Simple_repeat Simple_repeat 3 14 -24 2172 122 23 0 chr10 25411640 25411944 -114904821 + AluSx SINE Alu 1 311 -1 201 139 0 0 chr10 25411944 25411967 -114904798 + (GAAAA)n Simple_repeat Simple_repeat 13 38 0 2263 218 98 73 chr10 25411968 25412322 -114904443 - MER21B LTR ERV1 -30 833 490 4673 66 2 0 chr10 25412322 25412880 -114903885 - L1PA5 LINE L1 -1 6153 5595 2263 218 98 73 chr10 25412880 25413055 -114903710 - MER21B LTR ERV1 -373 490 321 1685 180 21 0 chr10 25413055 25413338 -114903427 + AluJo SINE Alu 1 289 -23 2263 218 98 73 chr10 25413338 25413619 -114903146 - MER21B LTR ERV1 -542 321 1 711 158 0 25 chr10 25413626 25413746 -114903019 - MLT1A1 LTR MaLR -229 136 20 267 176 0 20 chr10 25413746 25413797 -114902968 - MSTA LTR MaLR 0 428 379 * 442 92 0 103 chr10 25413796 25413858 -114902907 - MLT1A1 LTR MaLR -287 78 26 1801 136 51 90 chr10 25413858 25414248 -114902517 - THE1C LTR MaLR 0 375 1 442 92 0 103 chr10 25414248 25414272 -114902493 - MLT1A1 LTR MaLR -339 26 1 2182 114 6 16 chr10 25414370 25414686 -114902079 - AluSq SINE Alu 0 313 1 423 94 0 0 chr10 25414789 25414842 -114901923 - Alu SINE Alu -257 53 1 1089 286 26 52 chr10 25414889 25415354 -114901411 - HAL1 LINE L1 -1509 998 546 26 30 0 0 chr10 25415377 25415410 -114901355 + AT_rich Low_complexity Low_complexity 1 33 0 814 191 0 0 chr10 25415438 25415585 -114901180 - FRAM SINE Alu -32 144 1 1451 228 53 36 chr10 25415586 25415998 -114900767 - HAL1 LINE L1 -1952 555 137 783 206 0 0 chr10 25416015 25416141 -114900624 - FLAM_A SINE Alu -6 127 2 2323 119 0 0 chr10 25416299 25416611 -114900154 - AluSx SINE Alu 0 312 1 226 367 43 0 chr10 25416640 25416779 -114899986 + L2 LINE L2 2552 2696 -618 402 369 25 25 chr10 25416860 25417058 -114899707 + L2 LINE L2 2875 3072 -200 29 0 0 0 chr10 25417408 25417437 -114899328 + AT_rich Low_complexity Low_complexity 1 29 0 1808 161 0 27 chr10 25417456 25417755 -114899010 + AluJo SINE Alu 6 296 -16 1812 151 39 3 chr10 25417880 25418190 -114898575 - AluSx SINE Alu 0 320 1 38 0 0 0 chr10 25419149 25419187 -114897578 + AT_rich Low_complexity Low_complexity 1 38 0 1949 158 3 3 chr10 25419632 25419943 -114896822 - AluJo SINE Alu 0 312 2 1927 164 0 0 chr10 25420641 25420939 -114895826 + AluJo SINE Alu 1 298 -14 200 247 72 113 chr10 25421096 25421193 -114895572 + MIR SINE MIR 82 174 -88 260 135 0 19 chr10 25421255 25421307 -114895458 + (CAT)n Simple_repeat Simple_repeat 2 52 0 593 247 54 12 chr10 25421609 25421775 -114894990 + MLT1I LTR MaLR 237 409 0 887 208 110 114 chr10 25421866 25422174 -114894591 - AluJo SINE Alu -4 308 2 781 192 0 8 chr10 25422624 25422749 -114894016 - FLAM_C SINE Alu -9 124 1 291 114 0 0 chr10 25422823 25422867 -114893898 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1391 50 0 6 chr10 25422869 25423050 -114893715 + (GAA)n Simple_repeat Simple_repeat 1 180 0 555 269 21 14 chr10 25423441 25423582 -114893183 + MIR SINE MIR 9 150 -112 1754 177 3 13 chr10 25423660 25423960 -114892805 - AluJo SINE Alu -15 297 1 2179 97 0 53 chr10 25424826 25425146 -114891619 - AluY SINE Alu -8 303 1 604 148 26 35 chr10 25425151 25425266 -114891499 - FRAM SINE Alu 0 40 1 342 289 103 13 chr10 25425278 25425434 -114891331 - L1ME4a LINE L1 -6 6115 5946 1725 194 0 0 chr10 25425885 25426179 -114890586 - AluJo SINE Alu -18 294 1 2060 140 3 0 chr10 25426368 25426668 -114890097 + AluSx SINE Alu 1 301 -11 723 220 119 0 chr10 25427281 25427449 -114889316 - MER5A DNA MER1_type 0 189 2 2253 123 0 0 chr10 25427455 25427763 -114889002 - AluSx SINE Alu -2 310 3 360 264 43 61 chr10 25428170 25428333 -114888432 - MIR SINE MIR -71 191 32 205 283 0 17 chr10 25428382 25428442 -114888323 - L2 LINE L2 -1339 1975 1917 1311 158 19 142 chr10 25428556 25428879 -114887886 + AluJb SINE Alu 1 283 -19 334 94 31 0 chr10 25429924 25429988 -114886777 + (TA)n Simple_repeat Simple_repeat 2 67 0 189 0 0 0 chr10 25429988 25430009 -114886756 + (GA)n Simple_repeat Simple_repeat 2 22 0 1526 192 0 11 chr10 25430009 25430290 -114886475 - AluJo SINE Alu -34 278 1 373 159 43 0 chr10 25430596 25430665 -114886100 + MIR SINE MIR 105 176 -86 816 155 9 0 chr10 25430690 25430806 -114885959 - FLAM_C SINE Alu -25 118 2 304 224 30 0 chr10 25430807 25430874 -114885891 + MIR SINE MIR 167 235 -27 2209 117 13 0 chr10 25431266 25431564 -114885201 - AluSx SINE Alu -10 302 1 232 293 47 28 chr10 25431925 25432031 -114884734 + MIR3 SINE MIR 92 199 -9 2563 63 0 0 chr10 25432627 25432927 -114883838 - AluY SINE Alu -11 300 1 2324 119 15 0 chr10 25433571 25433907 -114882858 - L1PA13 LINE L1 -14 6149 5809 2074 122 3 20 chr10 25434344 25434640 -114882125 - AluSg SINE Alu -19 291 1 26 0 0 0 chr10 25434650 25434676 -114882089 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 25434676 25434703 -114882062 + (CA)n Simple_repeat Simple_repeat 2 28 0 2051 141 0 0 chr10 25434926 25435225 -114881540 - AluSx SINE Alu -13 299 1 2175 80 0 17 chr10 25435327 25435663 -114881102 - AluY SINE Alu 0 331 1 745 257 148 43 chr10 25435669 25436300 -114880465 - L1ME3 LINE L1 -295 5850 5158 1359 149 0 14 chr10 25436301 25436515 -114880250 + AluJb SINE Alu 1 211 -101 1584 17 0 0 chr10 25436555 25436732 -114880033 + AluY SINE Alu 127 303 -8 310 305 18 24 chr10 25436808 25436975 -114879790 - L1ME3 LINE L1 -1078 5051 4886 705 234 80 48 chr10 25437014 25437365 -114879400 - L1ME3 LINE L1 -4863 1256 895 954 124 29 0 chr10 25437783 25437920 -114878845 - AluJb SINE Alu -171 141 1 286 358 55 22 chr10 25437922 25438196 -114878569 - L1ME3 LINE L1 -5710 409 127 6491 32 0 1 chr10 25438773 25439489 -114877276 - L1PA3 LINE L1 0 6155 5441 37131 40 113 2 chr10 25439589 25444584 -114872181 - L1P1 LINE L1 -579 5576 12 228 167 21 0 chr10 25444723 25444771 -114871994 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2555 177 133 4 chr10 25444931 25445418 -114871347 + MER44D DNA MER2_type 1 605 0 5944 80 47 3 chr10 25445537 25446284 -114870481 - LTR17 LTR ERV1 0 780 1 2035 116 0 27 chr10 25446395 25446688 -114870077 + AluSg1 SINE Alu 5 289 -20 212 357 123 56 chr10 25447047 25447299 -114869466 - L2 LINE L2 -4 3268 3000 672 160 5 43 chr10 25447447 25447634 -114869131 + CT-rich Low_complexity Low_complexity 1 180 0 2020 143 0 3 chr10 25447637 25447944 -114868821 - AluJb SINE Alu -6 306 1 1196 211 23 0 chr10 25449685 25449903 -114866862 + MER58A DNA MER1_type 2 224 0 916 268 121 16 chr10 25449914 25450228 -114866537 - MLT1I LTR MaLR 0 409 63 2421 159 32 25 chr10 25450244 25450652 -114866113 + LTR57 LTR ERVL 1 411 0 357 213 13 27 chr10 25450707 25450782 -114865983 - Tigger2a DNA MER2_type 0 434 361 691 169 52 70 chr10 25450782 25450932 -114865833 - L1PA16 LINE L1 -4 6162 6014 975 135 0 0 chr10 25450932 25451102 -114865663 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 691 169 52 70 chr10 25451102 25451123 -114865642 - L1PA16 LINE L1 -152 6014 5994 1799 172 3 17 chr10 25451123 25451419 -114865346 - AluJb SINE Alu -20 292 1 4718 146 55 12 chr10 25451420 25452385 -114864380 - L1PA16 LINE L1 -125 6041 5018 2397 123 11 24 chr10 25452385 25452766 -114863999 - Tigger2a DNA MER2_type -58 376 1 707 219 273 44 chr10 25453077 25453392 -114863373 - LTR16A LTR ERVL -1 449 63 * 3182 143 9 28 chr10 25453390 25453930 -114862835 - MER34B LTR ERV1 -33 532 3 1133 289 51 28 chr10 25453944 25454377 -114862388 - L2 LINE L2 -2313 1001 559 244 366 12 0 chr10 25454447 25454529 -114862236 + MIR3 SINE MIR 117 199 -9 218 298 97 8 chr10 25454976 25455100 -114861665 + L2 LINE L2 3162 3296 -17 1757 159 17 21 chr10 25455101 25455390 -114861375 - AluJo SINE Alu -24 288 1 357 250 80 18 chr10 25456127 25456239 -114860526 + MIR3 SINE MIR 74 192 -16 2692 124 16 56 chr10 25456528 25456973 -114859792 - MSTA LTR MaLR -1 427 1 1113 237 85 75 chr10 25457124 25457320 -114859445 - MER34 LTR ERV1 0 542 349 672 240 0 0 chr10 25457320 25457445 -114859320 - FLAM_C SINE Alu -8 125 1 1113 237 85 75 chr10 25457445 25457780 -114858985 - MER34 LTR ERV1 -193 349 6 243 88 0 0 chr10 25457846 25457880 -114858885 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 294 50 0 0 chr10 25458490 25458530 -114858235 + (CA)n Simple_repeat Simple_repeat 1 40 0 4445 115 63 72 chr10 25458569 25459168 -114857597 - L1MC1 LINE L1 -86 6247 5657 1492 148 155 30 chr10 25459168 25459432 -114857333 + AluJb SINE Alu 1 297 -5 4445 115 63 72 chr10 25459432 25459661 -114857104 - L1MC1 LINE L1 -676 5657 5427 2324 97 0 0 chr10 25459744 25460034 -114856731 + AluSg SINE Alu 1 290 -20 184 348 84 39 chr10 25460179 25460334 -114856431 + L2 LINE L2 3097 3258 -14 404 259 0 0 chr10 25460415 25460500 -114856265 - MIR SINE MIR -148 114 30 321 287 8 31 chr10 25460923 25461052 -114855713 + MLT1L LTR MaLR 435 560 -55 921 166 0 13 chr10 25461626 25461783 -114854982 + FRAM SINE Alu 1 155 -21 21 0 0 0 chr10 25462480 25462501 -114854264 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 25462989 25463017 -114853748 + AT_rich Low_complexity Low_complexity 1 28 0 464 169 0 0 chr10 25464233 25464316 -114852449 + MLT1K LTR MaLR 506 588 0 274 264 41 66 chr10 25465052 25465173 -114851592 + L2 LINE L2 2141 2258 -1056 1296 216 0 8 chr10 25465175 25465430 -114851335 - AluJb SINE Alu -5 307 55 477 92 69 0 chr10 25465430 25465517 -114851248 + L1MA1 LINE L1 6106 6198 -104 751 161 7 13 chr10 25465628 25465777 -114850988 + L1MA1 LINE L1 6155 6302 0 345 127 63 16 chr10 25465793 25465856 -114850909 - AluJb SINE Alu -236 66 1 357 350 148 27 chr10 25465856 25466315 -114850450 + L2 LINE L2 2253 2824 -448 1798 156 0 49 chr10 25466315 25466454 -114850311 + AluJo SINE Alu 1 145 -167 2224 100 0 0 chr10 25466454 25466789 -114849976 + AluY SINE Alu 1 311 0 1798 156 0 49 chr10 25466789 25466977 -114849788 + AluJo SINE Alu 145 312 0 357 350 148 27 chr10 25466977 25467232 -114849533 + L2 LINE L2 2824 3047 -225 809 134 14 42 chr10 25467969 25468111 -114848654 - FLAM_C SINE Alu -1 142 5 796 259 102 13 chr10 25469322 25469558 -114847207 - MIR SINE MIR 0 262 6 253 360 54 37 chr10 25470088 25470385 -114846380 + L2 LINE L2 2065 2366 -948 23 54 0 0 chr10 25470474 25470511 -114846254 + AT_rich Low_complexity Low_complexity 1 37 0 434 255 111 74 chr10 25470538 25470754 -114846011 - MIR SINE MIR -36 226 3 255 264 106 103 chr10 25470933 25471206 -114845559 - LTR33 LTR ERVL -104 417 144 284 250 164 0 chr10 25474752 25474856 -114841909 + MIR SINE MIR 1 122 -86 1609 143 87 11 chr10 25475344 25475609 -114841156 - AluJb SINE Alu -27 285 1 23 54 0 0 chr10 25475612 25475649 -114841116 + AT_rich Low_complexity Low_complexity 1 37 0 925 261 99 35 chr10 25475651 25476114 -114840651 - HAL1 LINE L1 -13 2494 2002 28 0 0 0 chr10 25476322 25476350 -114840415 + AT_rich Low_complexity Low_complexity 1 28 0 402 265 68 61 chr10 25476509 25476656 -114840109 - HAL1 LINE L1 -651 1856 1709 2290 105 63 0 chr10 25476659 25476993 -114839772 + THE1A LTR MaLR 1 355 0 8566 135 19 113 chr10 25476993 25478737 -114838028 + THE1A-int LTR MaLR 1 1580 0 2532 81 32 3 chr10 25478737 25479082 -114837683 + THE1A LTR MaLR 1 355 0 2110 244 96 42 chr10 25479088 25479627 -114837138 - HAL1 LINE L1 -805 1702 1193 2442 93 0 0 chr10 25479627 25479938 -114836827 - AluY SINE Alu 0 311 1 2110 244 96 42 chr10 25479938 25480366 -114836399 - HAL1 LINE L1 -1314 1193 683 1652 191 0 27 chr10 25480483 25480781 -114835984 - AluJb SINE Alu -22 290 1 491 297 91 32 chr10 25481839 25481895 -114834870 + MIR SINE MIR 25 76 -186 2070 118 8 87 chr10 25481895 25482261 -114834504 + MER1B DNA MER1_type 1 337 0 491 297 91 32 chr10 25482261 25482423 -114834342 + MIR SINE MIR 76 256 -6 31 44 0 0 chr10 25482454 25482499 -114834266 + AT_rich Low_complexity Low_complexity 1 45 0 2222 113 0 22 chr10 25483109 25483427 -114833338 - AluSq SINE Alu -2 311 1 1215 62 0 6 chr10 25483836 25483996 -114832769 + AluY SINE Alu 139 297 -14 418 94 0 0 chr10 25484029 25484093 -114832672 + L1MA9 LINE L1 6087 6150 -162 345 109 0 0 chr10 25484247 25484302 -114832463 + (TG)n Simple_repeat Simple_repeat 2 56 0 263 317 195 6 chr10 25484605 25484769 -114831996 + MIR SINE MIR 3 197 -65 27 87 0 0 chr10 25484769 25484838 -114831927 + AT_rich Low_complexity Low_complexity 1 69 0 1954 165 58 31 chr10 25484957 25485485 -114831280 + MLT2A2 LTR ERVL 1 554 0 22 56 0 0 chr10 25485584 25485620 -114831145 + AT_rich Low_complexity Low_complexity 1 36 0 340 316 53 44 chr10 25486138 25486442 -114830323 - L1ME LINE L1 -395 5726 5416 1841 170 0 0 chr10 25486442 25486759 -114830006 - AluJo SINE Alu 0 317 1 340 316 53 44 chr10 25486759 25486795 -114829970 - L1ME LINE L1 -705 5416 5382 1381 195 9 46 chr10 25487124 25487472 -114829293 - L1MB8 LINE L1 -3 6175 5841 252 251 82 86 chr10 25487447 25487690 -114829075 - L1MB8 LINE L1 -1095 5051 4810 * 867 181 0 0 chr10 25487739 25487883 -114828882 - FRAM SINE Alu -32 144 1 444 291 26 62 chr10 25487884 25488056 -114828709 - L1MB8 LINE L1 -1396 4750 4585 2102 133 0 0 chr10 25488056 25488369 -114828396 - AluSx SINE Alu 0 313 1 444 291 26 62 chr10 25488369 25488422 -114828343 - L1MB8 LINE L1 -1561 4585 4532 1882 155 14 0 chr10 25488958 25489236 -114827529 - AluJo SINE Alu -30 282 1 629 272 87 5 chr10 25490964 25491148 -114825617 + MIR SINE MIR 32 230 -32 1562 176 0 65 chr10 25492004 25492310 -114824455 - AluJo SINE Alu -6 306 21 210 244 0 0 chr10 25492442 25492483 -114824282 + L2 LINE L2 3226 3266 -6 1807 162 81 8 chr10 25493141 25493536 -114823229 - L1MD1 LINE L1 0 6636 6213 932 167 7 0 chr10 25493536 25493686 -114823079 + FRAM SINE Alu 1 149 -27 7789 225 47 27 chr10 25493720 25495148 -114821617 - L1MD1 LINE L1 -458 6178 4780 1704 184 0 7 chr10 25495148 25495430 -114821335 - AluSx SINE Alu -32 280 1 7789 225 47 27 chr10 25495430 25495884 -114820881 - L1MD1 LINE L1 -1856 4780 4336 2139 134 3 0 chr10 25495884 25496183 -114820582 + AluSx SINE Alu 1 300 -12 7789 225 47 27 chr10 25496183 25497642 -114819123 - L1MD1 LINE L1 -2300 4336 2769 1776 148 64 15 chr10 25497656 25498062 -114818703 - L1MD1 LINE L1 -3890 2650 2225 2641 221 63 3 chr10 25498064 25498679 -114818086 + MER82 DNA MER2_type 1 652 -1 4195 208 75 24 chr10 25498688 25499198 -114817567 - L1MD1 LINE L1 -4477 2063 1580 252 0 0 0 chr10 25499198 25499226 -114817539 + (TA)n Simple_repeat Simple_repeat 2 29 0 4195 208 75 24 chr10 25499226 25499986 -114816779 - L1MD1 LINE L1 -4960 1580 656 201 162 0 0 chr10 25502260 25502297 -114814468 + A-rich Low_complexity Low_complexity 1 37 0 1565 185 0 73 chr10 25502348 25502662 -114814103 - AluJo SINE Alu -21 291 1 2373 74 0 26 chr10 25503248 25503560 -114813205 + AluY SINE Alu 1 304 -7 1866 199 8 8 chr10 25503862 25504238 -114812527 + L1M3e LINE L1 466 841 -6648 2493 259 19 34 chr10 25504436 25505357 -114811408 + L1M3e LINE L1 1885 2791 -4774 302 277 66 36 chr10 25505387 25505524 -114811241 + L1ME4a LINE L1 5366 5506 -615 712 312 23 0 chr10 25505536 25505754 -114811011 + MIR SINE MIR 33 255 -7 578 271 74 11 chr10 25505791 25506075 -114810690 + L1ME4a LINE L1 5527 5828 -293 924 42 0 0 chr10 25506096 25506214 -114810551 - L1PA4 LINE L1 -3 6152 6035 22 0 0 0 chr10 25506306 25506328 -114810437 + AT_rich Low_complexity Low_complexity 1 22 0 238 171 0 0 chr10 25506524 25506565 -114810200 - MLT1B LTR MaLR 0 390 350 829 190 13 25 chr10 25506591 25506749 -114810016 - FRAM SINE Alu -10 156 1 1530 168 21 4 chr10 25507272 25507552 -114809213 + MLT1B LTR MaLR 1 285 -105 1059 328 133 24 chr10 25508249 25509235 -114807530 - L2 LINE L2 -2 3270 2182 725 71 0 0 chr10 25509404 25509502 -114807263 - L1PB3 LINE L1 -1 6153 6056 759 240 76 26 chr10 25509864 25510380 -114806385 - MLT2F LTR ERVL -4 659 80 385 253 34 68 chr10 25512006 25512152 -114804613 - MLT1K LTR MaLR -1 587 447 297 0 0 0 chr10 25512331 25512364 -114804401 + (CA)n Simple_repeat Simple_repeat 1 33 0 846 263 60 101 chr10 25512590 25513192 -114803573 + MER77 LTR ERV1 24 601 -4 183 216 27 0 chr10 25513725 25513762 -114803003 + L2 LINE L2 3191 3228 -85 1801 233 69 67 chr10 25513764 25514417 -114802348 - MER76 LTR ERV -34 654 1 273 273 13 26 chr10 25514417 25514494 -114802271 + L2 LINE L2 3181 3256 -16 15401 63 17 1 chr10 25517308 25520145 -114796620 - L1PA6 LINE L1 0 6154 3288 32120 41 1 2 chr10 25520166 25525141 -114791624 - L1PA4 LINE L1 0 6155 1218 13125 132 10 19 chr10 25525268 25527519 -114789246 - L1PA6 LINE L1 -3905 2241 13 1769 149 14 0 chr10 25527776 25528065 -114788700 + L1PB4 LINE L1 5861 6153 -3 516 278 72 61 chr10 25528798 25529204 -114787561 - L1MC5 LINE L1 -37 7924 7507 2323 107 3 0 chr10 25529204 25529514 -114787251 - AluSp SINE Alu -2 311 1 516 278 72 61 chr10 25529514 25529714 -114787051 - L1MC5 LINE L1 -454 7507 7311 2683 36 0 0 chr10 25529718 25530025 -114786740 - AluY SINE Alu -4 307 1 216 310 0 0 chr10 25531112 25531170 -114785595 - MIR SINE MIR -139 123 66 2026 149 3 13 chr10 25531344 25531659 -114785106 - AluSx SINE Alu 0 312 1 1840 166 3 28 chr10 25531829 25532149 -114784616 + AluJb SINE Alu 1 312 0 890 137 0 30 chr10 25532841 25532972 -114783793 - FLAM_C SINE Alu -16 127 1 240 264 25 41 chr10 25534193 25534314 -114782451 + LTR67 LTR ERVL 428 546 -11 1769 160 19 41 chr10 25535805 25536123 -114780642 - AluJo SINE Alu -1 311 1 1891 158 3 13 chr10 25536432 25536730 -114780035 + AluJo SINE Alu 6 300 -12 476 263 56 25 chr10 25536916 25537076 -114779689 - MIR SINE MIR -1 261 97 865 165 0 0 chr10 25537741 25537874 -114778891 - FLAM_C SINE Alu 0 133 1 272 322 68 0 chr10 25537977 25538123 -114778642 - MER103 DNA DNA -8 158 3 2070 130 0 13 chr10 25538617 25538924 -114777841 - AluSx SINE Alu -9 303 1 1563 220 54 2 chr10 25540241 25540646 -114776119 - LTR16A LTR ERVL -1 449 24 1480 194 7 44 chr10 25541185 25541478 -114775287 - AluJo SINE Alu -30 282 1 770 228 72 5 chr10 25541537 25541730 -114775035 + MIR SINE MIR 47 252 -10 419 324 118 15 chr10 25541824 25542028 -114774737 - MIR SINE MIR -15 247 23 1471 67 5 0 chr10 25542076 25542270 -114774495 - L1PA7 LINE L1 0 6154 5960 3572 118 5 5 chr10 25543727 25544279 -114772486 - L1PA14 LINE L1 -1 6160 5609 223 133 17 17 chr10 25545390 25545450 -114771315 + (TA)n Simple_repeat Simple_repeat 1 60 0 332 291 82 72 chr10 25545814 25546133 -114770632 + L1ME3A LINE L1 5849 6170 0 2220 114 3 0 chr10 25546200 25546499 -114770266 - AluSx SINE Alu -12 300 1 358 256 0 0 chr10 25546630 25546708 -114770057 - MIR SINE MIR -17 245 168 1772 167 21 15 chr10 25546720 25547056 -114769709 - MER2 DNA MER2_type 0 345 8 272 270 183 22 chr10 25547301 25547438 -114769327 - L2 LINE L2 0 3272 3114 200 385 28 0 chr10 25547893 25548002 -114768763 + L2 LINE L2 3160 3271 -42 2094 135 0 0 chr10 25548989 25549286 -114767479 + AluSx SINE Alu 1 297 -15 292 189 0 40 chr10 25549627 25549701 -114767064 - Charlie7 DNA MER1_type -2507 105 35 1671 170 3 10 chr10 25550229 25550517 -114766248 - AluJo SINE Alu -26 286 1 697 221 25 65 chr10 25550892 25551038 -114765727 + MIR SINE MIR 16 153 -109 818 176 0 15 chr10 25551038 25551169 -114765596 + FLAM_C SINE Alu 1 129 -4 697 221 25 65 chr10 25551169 25551221 -114765544 + MIR SINE MIR 153 206 -56 216 274 16 16 chr10 25551368 25551430 -114765335 + L2 LINE L2 3155 3216 -56 * 539 208 39 15 chr10 25551426 25551556 -114765209 - MIR SINE MIR -91 171 39 439 251 86 23 chr10 25551747 25551922 -114764843 - MIR SINE MIR -57 205 20 27 0 0 0 chr10 25552237 25552264 -114764501 + AT_rich Low_complexity Low_complexity 1 27 0 2335 72 13 0 chr10 25553318 25553624 -114763141 + AluY SINE Alu 1 310 -1 284 231 0 0 chr10 25553690 25553742 -114763023 - MER5B DNA MER1_type -124 54 3 1904 142 61 17 chr10 25554120 25554479 -114762286 + THE1C LTR MaLR 1 375 0 2070 145 0 3 chr10 25554585 25554889 -114761876 + AluSx SINE Alu 1 303 -9 286 291 126 28 chr10 25555737 25556095 -114760670 + L1ME LINE L1 3493 3885 -2261 2088 120 10 0 chr10 25556476 25556768 -114759997 + AluSx SINE Alu 1 295 -17 334 351 18 7 chr10 25556828 25557113 -114759652 + L1ME LINE L1 4522 4809 -1337 38 0 0 0 chr10 25557474 25557512 -114759253 + AT_rich Low_complexity Low_complexity 1 38 0 695 228 14 7 chr10 25557562 25557707 -114759058 - FRAM SINE Alu -30 146 1 379 295 110 28 chr10 25557752 25558152 -114758613 + L1ME LINE L1 5319 5751 -370 329 181 0 110 chr10 25558434 25558561 -114758204 + L1M4 LINE L1 5195 5307 -839 4905 243 57 53 chr10 25558590 25560420 -114756345 + L1M4 LINE L1 17 1838 -4806 2189 129 0 0 chr10 25560420 25560715 -114756050 + AluSg SINE Alu 1 295 -15 4905 243 57 53 chr10 25560715 25561053 -114755712 + L1M4 LINE L1 1838 2173 -4471 1996 161 0 0 chr10 25561053 25561352 -114755413 - AluSx SINE Alu -13 299 1 4905 243 57 53 chr10 25561352 25561583 -114755182 + L1M4 LINE L1 2173 2402 -4242 4620 138 8 25 chr10 25561583 25562387 -114754378 - L1MA6 LINE L1 0 6300 5511 4905 243 57 53 chr10 25562387 25563276 -114753489 + L1M4 LINE L1 2402 3331 -3313 859 75 8 0 chr10 25563350 25563470 -114753295 + L1PB2 LINE L1 6028 6148 -3 281 135 19 0 chr10 25563546 25563598 -114753167 + C-rich Low_complexity Low_complexity 3 55 0 2050 120 0 0 chr10 25563603 25563878 -114752887 - AluSx SINE Alu -37 275 1 292 296 104 27 chr10 25563879 25564329 -114752436 - L1MDa LINE L1 -3200 2929 2445 365 267 10 0 chr10 25564472 25564573 -114752192 - L1MC4 LINE L1 -13 8029 7928 240 295 0 0 chr10 25564606 25564667 -114752098 + A-rich Low_complexity Low_complexity 3 63 0 273 234 105 60 chr10 25564703 25564938 -114751827 - L1MDa LINE L1 -3906 2223 2020 2055 108 22 4 chr10 25565020 25565298 -114751467 + AluSx SINE Alu 1 283 -29 371 301 42 54 chr10 25565413 25565672 -114751093 - L1MDa LINE L1 -5597 522 267 234 306 12 12 chr10 25566316 25566401 -114750364 - L1MDa LINE L1 -6034 85 1 236 175 0 0 chr10 25566430 25566470 -114750295 + MIR SINE MIR 77 116 -146 974 228 22 100 chr10 25566724 25567017 -114749748 - MER102b DNA MER1_type -1091 337 75 2009 147 0 6 chr10 25567017 25567329 -114749436 + AluSx SINE Alu 1 310 -2 974 228 22 100 chr10 25567329 25567394 -114749371 - MER102b DNA MER1_type -1353 75 7 1549 215 57 16 chr10 25568345 25568731 -114748034 - MLT1C LTR MaLR -1 466 65 1084 169 0 27 chr10 25568737 25568920 -114747845 + Tigger4(Zombi) DNA MER2_type 1 178 -2553 13162 123 35 15 chr10 25568921 25571011 -114745754 + Tigger4(Zombi) DNA MER2_type 564 2694 -37 259 123 88 35 chr10 25571012 25571069 -114745696 - MLT1C LTR MaLR -407 60 1 261 200 33 78 chr10 25571240 25571330 -114745435 - MIR3 SINE MIR -4 204 119 24 67 0 0 chr10 25571442 25571487 -114745278 + AT_rich Low_complexity Low_complexity 1 45 0 1449 253 58 20 chr10 25572060 25572300 -114744465 + L1MC4 LINE L1 7437 7666 -376 2048 134 0 0 chr10 25572300 25572592 -114744173 - AluJb SINE Alu -19 293 2 1449 253 58 20 chr10 25572592 25572797 -114743968 + L1MC4 LINE L1 7666 7899 -143 494 298 79 59 chr10 25573067 25573378 -114743387 - L1M4 LINE L1 -1730 4416 4113 477 110 44 11 chr10 25573378 25573469 -114743296 - L1MA5A LINE L1 -5 6292 6199 494 298 79 59 chr10 25573469 25573959 -114742806 - L1M4 LINE L1 -2033 4113 3599 1768 133 4 0 chr10 25574421 25574677 -114742088 + AluSg SINE Alu 38 294 -16 27 62 0 0 chr10 25574740 25574788 -114741977 + AT_rich Low_complexity Low_complexity 1 48 0 342 301 82 20 chr10 25575087 25575283 -114741482 - L1MC4a LINE L1 -1933 5875 5668 264 288 0 14 chr10 25575283 25575356 -114741409 - LTR33A LTR ERVL 0 523 452 1607 320 17 10 chr10 25576156 25576749 -114740016 - ERVL LTR ERVL -382 5382 4786 545 289 111 17 chr10 25576837 25577072 -114739693 - ERVL LTR ERVL -1103 4661 4405 1722 173 36 19 chr10 25577730 25578089 -114738676 - MLT1A1 LTR MaLR 0 365 1 207 186 0 0 chr10 25578530 25578573 -114738192 + (CATATA)n Simple_repeat Simple_repeat 1 43 0 31 0 0 0 chr10 25578631 25578662 -114738103 + AT_rich Low_complexity Low_complexity 1 31 0 1810 78 0 12 chr10 25579957 25580200 -114736565 + AluY SINE Alu 72 311 0 264 291 127 37 chr10 25580264 25580398 -114736367 - MIR3 SINE MIR -38 170 25 383 235 20 20 chr10 25581306 25581404 -114735361 + MER3 DNA MER1_type 5 102 -107 1622 199 3 16 chr10 25581416 25581723 -114735042 + AluJb SINE Alu 1 303 -9 2725 129 65 17 chr10 25581727 25581817 -114734948 + L1MA3 LINE L1 5760 5844 -461 1814 148 75 31 chr10 25581817 25582176 -114734589 + THE1C LTR MaLR 1 375 0 2725 129 65 17 chr10 25582176 25582606 -114734159 + L1MA3 LINE L1 5844 6305 0 416 134 85 0 chr10 25582626 25582708 -114734057 + MER3 DNA MER1_type 104 192 -17 263 327 200 32 chr10 25583381 25583907 -114732858 - L2 LINE L2 -2441 873 260 217 316 163 0 chr10 25586193 25586291 -114730474 + L2 LINE L2 3155 3268 -4 3399 144 61 15 chr10 25586990 25587579 -114729186 + Ricksha DNA DNA 9 624 -1422 845 119 0 30 chr10 25587584 25587718 -114729047 + Ricksha DNA DNA 1057 1186 -2060 1774 144 0 0 chr10 25587838 25588095 -114728670 + AluSq SINE Alu 1 257 -56 362 258 197 1 chr10 25588316 25588624 -114728141 + LTR16A LTR ERVL 52 450 0 2043 153 7 0 chr10 25589009 25589317 -114727448 - AluSx SINE Alu 0 312 3 225 289 0 0 chr10 25589708 25589760 -114727005 + L1ME3 LINE L1 601 652 -5467 210 172 52 0 chr10 25589800 25589858 -114726907 + A-rich Low_complexity Low_complexity 3 63 0 21 0 0 0 chr10 25589945 25589966 -114726799 + AT_rich Low_complexity Low_complexity 1 21 0 379 365 47 41 chr10 25590090 25590430 -114726335 + HAL1 LINE L1 1227 1568 -939 1742 142 68 4 chr10 25590457 25590738 -114726027 + AluSx SINE Alu 13 311 -1 543 266 184 26 chr10 25591308 25592000 -114724765 + L1ME3 LINE L1 2872 3672 -2457 392 204 23 11 chr10 25592122 25592210 -114724555 - MER74A LTR ERVL 0 558 470 765 137 8 0 chr10 25592234 25592351 -114724414 - MER74A LTR ERVL -440 118 1 383 268 109 22 chr10 25592357 25592495 -114724270 + HsTC2b DNA Tc2 66 215 -700 341 280 156 32 chr10 25592559 25592777 -114723988 + L1ME3 LINE L1 4999 5243 -886 477 238 82 105 chr10 25592804 25592952 -114723813 + L1ME3 LINE L1 5315 5465 -680 1770 150 7 31 chr10 25592952 25593245 -114723520 - AluJo SINE Alu -22 290 5 477 238 82 105 chr10 25593245 25593411 -114723354 + L1ME3 LINE L1 5465 5622 -523 1076 241 93 21 chr10 25593482 25593814 -114722951 - LTR16B LTR ERVL -2 462 107 347 312 64 0 chr10 25593921 25594117 -114722648 + L1ME3 LINE L1 5725 5934 -219 42666 52 4 3 chr10 25594129 25600275 -114716490 - L1PA4 LINE L1 0 6155 1 24 85 0 0 chr10 25600848 25600907 -114715858 + AT_rich Low_complexity Low_complexity 1 59 0 28 0 0 0 chr10 25601743 25601771 -114714994 + AT_rich Low_complexity Low_complexity 1 28 0 1447 267 99 54 chr10 25601860 25602782 -114713983 - HAL1 LINE L1 -112 2395 1433 23 0 0 0 chr10 25602782 25602805 -114713960 + AT_rich Low_complexity Low_complexity 1 23 0 696 286 83 67 chr10 25603148 25603596 -114713169 - HAL1 LINE L1 -1504 1003 549 2131 251 64 16 chr10 25603609 25604247 -114712518 - L1ME1 LINE L1 -18 6217 5549 391 210 59 8 chr10 25604257 25604376 -114712389 - L1ME1 LINE L1 -1433 4782 4658 5944 265 109 44 chr10 25604525 25605874 -114710891 + L1MEc LINE L1 35 1295 -4920 2331 80 0 7 chr10 25605874 25606173 -114710592 + AluY SINE Alu 1 297 -14 5944 265 109 44 chr10 25606173 25606385 -114710380 + L1MEc LINE L1 1295 1492 -4723 1480 184 9 57 chr10 25606385 25606701 -114710064 + AluJo SINE Alu 12 312 0 5944 265 109 44 chr10 25606701 25607302 -114709463 + L1MEc LINE L1 1492 2053 -4162 2366 121 49 0 chr10 25607302 25607667 -114709098 - L1PA16 LINE L1 -9 6157 5775 5944 265 109 44 chr10 25607667 25607842 -114708923 + L1MEc LINE L1 2053 2215 -4000 7327 29 17 1 chr10 25607842 25609150 -114707615 + L1PA3 LINE L1 4830 6152 -3 5944 265 109 44 chr10 25609150 25611079 -114705686 + L1MEc LINE L1 2215 4584 -1631 340 44 0 0 chr10 25611197 25611242 -114705523 + L1PA16 LINE L1 6112 6156 -10 801 234 90 80 chr10 25611256 25611667 -114705098 - L1ME1 LINE L1 -4039 2357 1943 285 75 0 0 chr10 25612570 25612610 -114704155 + (CA)n Simple_repeat Simple_repeat 1 40 0 2071 147 46 0 chr10 25612616 25612964 -114703801 - MER47A DNA MER2_type 0 366 3 1678 177 49 57 chr10 25613041 25613409 -114703356 - MLT1A1 LTR MaLR 0 365 1 1116 205 77 48 chr10 25613427 25613468 -114703297 + MER76 LTR ERV 1 39 -649 2242 82 0 7 chr10 25613468 25613760 -114703005 - AluY SINE Alu -21 290 1 1116 205 77 48 chr10 25613760 25614280 -114702485 + MER76 LTR ERV 39 667 -21 2336 71 0 14 chr10 25615042 25615337 -114701428 + AluY SINE Alu 10 300 -11 252 231 0 0 chr10 25618779 25618857 -114697908 + (TA)n Simple_repeat Simple_repeat 1 78 0 480 35 0 0 chr10 25619258 25619316 -114697449 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 245 20 0 chr10 25619764 25619813 -114696952 + polypyrimidine Low_complexity Low_complexity 1 50 0 230 244 0 26 chr10 25619827 25619905 -114696860 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 465 300 93 20 chr10 25619985 25620135 -114696630 - L2 LINE L2 -4 3268 3108 229 333 43 26 chr10 25624107 25624224 -114692541 - L2 LINE L2 -1 3271 3153 308 273 91 0 chr10 25624350 25624460 -114692305 + L2 LINE L2 3153 3272 0 1855 155 7 30 chr10 25625165 25625468 -114691297 + AluJb SINE Alu 1 296 -16 291 212 106 47 chr10 25626176 25626261 -114690504 - MIR3 SINE MIR -35 173 84 1015 187 4 3 chr10 25626364 25626601 -114690164 - AluJb SINE Alu -14 298 2 316 233 110 7 chr10 25626883 25626996 -114689769 - MIR3 SINE MIR -2 206 78 253 327 19 28 chr10 25627091 25627198 -114689567 + MIR SINE MIR 22 127 -135 940 199 0 0 chr10 25627199 25627365 -114689400 - FRAM SINE Alu 0 166 1 407 288 18 68 chr10 25627389 25627552 -114689213 + L2 LINE L2 3159 3313 0 1443 314 70 10 chr10 25627694 25628593 -114688172 + L2 LINE L2 2360 3313 0 418 293 16 0 chr10 25628589 25628712 -114688053 + MIR SINE MIR 138 262 0 * 387 0 0 0 chr10 25630243 25630286 -114686479 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr10 25630382 25630419 -114686346 + AT_rich Low_complexity Low_complexity 1 37 0 1198 60 7 0 chr10 25630421 25630570 -114686195 - AluY SINE Alu -129 182 33 434 262 105 47 chr10 25631071 25631243 -114685522 + MER63A DNA MER1_type 29 210 0 206 214 24 0 chr10 25631283 25631325 -114685440 + CT-rich Low_complexity Low_complexity 3 45 0 502 237 68 96 chr10 25631359 25631578 -114685187 - MER58C DNA MER1_type -2 213 1 487 223 18 12 chr10 25631623 25631789 -114684976 + (TA)n Simple_repeat Simple_repeat 1 167 0 5828 195 49 25 chr10 25631851 25634336 -114682429 - L1MB7 LINE L1 0 6184 3641 1579 149 67 0 chr10 25635033 25635315 -114681450 + L1PB4 LINE L1 5854 6154 -2 1998 146 44 39 chr10 25635547 25635909 -114680856 - THE1B LTR MaLR 0 364 1 317 325 32 32 chr10 25635957 25636114 -114680651 - MIR3 SINE MIR -49 159 3 208 304 215 18 chr10 25636146 25636451 -114680314 - L2 LINE L2 -338 2975 2615 1744 180 0 16 chr10 25636822 25637133 -114679632 + AluJo SINE Alu 5 310 -2 234 286 39 26 chr10 25637332 25637409 -114679356 - MIR SINE MIR -108 154 77 240 244 24 12 chr10 25637624 25637706 -114679059 + (TGAA)n Simple_repeat Simple_repeat 1 83 0 1016 174 42 46 chr10 25638755 25638996 -114677769 + MLT1D LTR MaLR 6 245 -260 478 179 120 0 chr10 25639061 25639178 -114677587 + MLT1D LTR MaLR 370 500 -5 408 333 94 44 chr10 25641427 25641832 -114674933 + L2 LINE L2 2209 2633 -681 456 238 21 28 chr10 25641838 25641981 -114674784 - LTR16A1 LTR ERVL 0 457 316 210 224 105 79 chr10 25642091 25642167 -114674598 + L2 LINE L2 2899 2976 -338 1935 166 15 100 chr10 25642274 25642755 -114674010 - LTR47B LTR ERVL 0 443 4 23 0 0 0 chr10 25643283 25643306 -114673459 + AT_rich Low_complexity Low_complexity 1 23 0 342 282 19 0 chr10 25644904 25645007 -114671758 - MIR SINE MIR 0 262 158 495 108 0 36 chr10 25645674 25645757 -114671008 - MADE1 DNA Mariner 0 80 1 328 130 29 0 chr10 25646398 25646467 -114670298 + GA-rich Low_complexity Low_complexity 1 71 0 2720 147 18 74 chr10 25646557 25646877 -114669888 + L1MB5 LINE L1 5578 5914 -260 1886 162 0 3 chr10 25646877 25647199 -114669566 + AluJo SINE Alu 3 312 0 2720 147 18 74 chr10 25647199 25647229 -114669536 + L1MB5 LINE L1 5914 5944 -230 2046 95 15 4 chr10 25647229 25647502 -114669263 + AluSc SINE Alu 17 292 -17 2720 147 18 74 chr10 25647502 25647774 -114668991 + L1MB5 LINE L1 5944 6166 -8 21 36 0 0 chr10 25647910 25647938 -114668827 + AT_rich Low_complexity Low_complexity 1 28 0 2103 132 26 59 chr10 25649508 25649964 -114666801 + L1MB3 LINE L1 5736 6176 -7 268 286 167 0 chr10 25650276 25650360 -114666405 - MIR SINE MIR -122 140 43 255 241 46 11 chr10 25650586 25650673 -114666092 - MLT1L LTR MaLR -353 262 173 23 0 0 0 chr10 25651007 25651030 -114665735 + AT_rich Low_complexity Low_complexity 1 23 0 2426 151 31 24 chr10 25651395 25651820 -114664945 - MSTA LTR MaLR 0 428 1 30 0 0 0 chr10 25653934 25653964 -114662801 + AT_rich Low_complexity Low_complexity 1 30 0 2940 33 10 0 chr10 25653982 25654371 -114662394 + L1P LINE L1 4994 5386 -760 1753 117 0 22 chr10 25654556 25654830 -114661935 - AluY SINE Alu -4 307 40 2259 108 3 10 chr10 25654859 25655156 -114661609 + AluSx SINE Alu 3 297 -15 21 36 0 0 chr10 25655179 25655207 -114661558 + AT_rich Low_complexity Low_complexity 1 28 0 6751 62 19 0 chr10 25655230 25656262 -114660503 - L1PA7 LINE L1 -6 6148 5131 440 51 0 0 chr10 25656263 25656322 -114660443 + L1PA7 LINE L1 5061 5119 -1027 4638 187 69 18 chr10 25656322 25657486 -114659279 - L1MC1 LINE L1 -5 6328 5225 2312 82 7 0 chr10 25657486 25657779 -114658986 - AluY SINE Alu -16 295 1 4638 187 69 18 chr10 25657779 25658641 -114658124 - L1MC1 LINE L1 -1108 5225 4078 2305 175 7 12 chr10 25658663 25659240 -114657525 - MER72 LTR ERV1 -28 694 82 2102 221 45 22 chr10 25659241 25659844 -114656921 - L1MC1 LINE L1 -2057 4089 3473 541 248 57 52 chr10 25659860 25660090 -114656675 - MER2 DNA MER2_type -1 344 114 864 242 49 0 chr10 25660091 25660397 -114656368 - L1MC1 LINE L1 -2860 3286 2966 2018 130 3 0 chr10 25660593 25660878 -114655887 - AluSx SINE Alu -14 298 13 25 31 0 0 chr10 25660906 25660938 -114655827 + AT_rich Low_complexity Low_complexity 1 32 0 1050 221 105 3 chr10 25660973 25661267 -114655498 + MER2 DNA MER2_type 11 334 -11 24 32 0 0 chr10 25661636 25661667 -114655098 + AT_rich Low_complexity Low_complexity 1 31 0 2132 125 0 16 chr10 25661863 25662166 -114654599 - AluSx SINE Alu -14 298 1 291 257 64 105 chr10 25662227 25662383 -114654382 - L1ME3A LINE L1 -232 5938 5777 1189 109 15 25 chr10 25662383 25662584 -114654181 - L1PA13 LINE L1 -5 6158 5960 291 257 64 105 chr10 25662584 25662769 -114653996 - L1ME3A LINE L1 -393 5777 5611 932 104 0 0 chr10 25662805 25662953 -114653812 - AluSg/x SINE Alu 0 303 156 574 274 19 14 chr10 25662953 25663341 -114653424 - L1ME3A LINE L1 -603 5567 5177 410 228 32 51 chr10 25663342 25663500 -114653265 - L1MA10 LINE L1 -4 6330 6176 * 690 211 22 28 chr10 25663477 25663657 -114653108 - L1ME LINE L1 -471 5695 5517 616 270 68 73 chr10 25663652 25664112 -114652653 - L1ME3A LINE L1 -953 5193 4737 * 1758 176 0 10 chr10 25664112 25664402 -114652363 - AluJo SINE Alu -25 287 1 616 270 68 73 chr10 25664402 25664734 -114652031 - L1ME3A LINE L1 -1409 4737 4405 2146 95 18 3 chr10 25664786 25665070 -114651695 - AluSc SINE Alu -21 288 1 2106 273 70 38 chr10 25666316 25666589 -114650176 - L2 LINE L2 0 3313 3050 2026 158 52 3 chr10 25666589 25666957 -114649808 + L1PB4 LINE L1 5757 6142 -14 2106 273 70 38 chr10 25666957 25667802 -114648963 - L2 LINE L2 -263 3050 2157 1703 189 11 3 chr10 25667951 25668236 -114648529 - AluJo SINE Alu -25 287 1 1056 115 0 0 chr10 25668370 25668509 -114648256 + AluSg/x SINE Alu 149 287 -25 211 229 16 33 chr10 25668912 25668973 -114647792 + CT-rich Low_complexity Low_complexity 4 63 0 483 316 143 23 chr10 25669501 25669852 -114646913 - L2 LINE L2 -553 2761 2369 360 280 49 35 chr10 25669855 25669929 -114646836 - L2 LINE L2 -1251 2063 1992 2645 147 7 16 chr10 25669929 25670359 -114646406 - MSTB LTR MaLR 0 426 1 360 280 49 35 chr10 25670359 25670427 -114646338 - L2 LINE L2 -1322 1992 1919 216 365 51 26 chr10 25671494 25671650 -114645115 - L2 LINE L2 -181 3091 2932 1497 231 12 34 chr10 25672259 25672675 -114644090 - MLT2D LTR ERVL -7 407 1 359 236 0 0 chr10 25672785 25672857 -114643908 + L2 LINE L2 3242 3313 0 2303 147 24 22 chr10 25673608 25673987 -114642778 + MSTB1 LTR MaLR 15 397 -35 2463 81 0 0 chr10 25673987 25674295 -114642470 - AluY SINE Alu -2 309 2 2303 147 24 22 chr10 25674295 25674330 -114642435 + MSTB1 LTR MaLR 397 430 -2 186 369 50 30 chr10 25675708 25675906 -114640859 + L2 LINE L2 200 401 -2913 378 330 17 8 chr10 25675907 25676025 -114640740 + L2 LINE L2 3153 3271 -1 496 211 12 23 chr10 25676025 25676196 -114640569 + GA-rich Low_complexity Low_complexity 1 169 0 319 371 88 17 chr10 25676240 25676593 -114640172 + L2 LINE L2 444 821 -2493 737 345 124 16 chr10 25676665 25676989 -114639776 + L2 LINE L2 1782 2070 -1244 2133 111 17 0 chr10 25676989 25677278 -114639487 - AluSc SINE Alu -14 295 2 737 345 124 16 chr10 25677278 25677937 -114638828 + L2 LINE L2 2070 2871 -443 193 274 179 34 chr10 25678167 25678284 -114638481 + L2 LINE L2 3180 3313 0 494 70 14 0 chr10 25678508 25678579 -114638186 + (TTCCC)n Simple_repeat Simple_repeat 4 75 0 1882 166 0 6 chr10 25678588 25678901 -114637864 - AluSx SINE Alu 0 312 2 445 275 75 44 chr10 25680434 25680594 -114636171 - MIR SINE MIR -40 222 58 261 340 107 55 chr10 25681467 25681758 -114635007 + L2 LINE L2 2958 3263 -9 241 344 22 11 chr10 25682921 25683011 -114633754 + MIR SINE MIR 35 125 -83 1741 171 0 43 chr10 25683516 25683838 -114632927 - AluJo SINE Alu -4 308 1 23 20 8 0 chr10 25684231 25684301 -114632464 + AT_rich Low_complexity Low_complexity 1 30 0 3875 198 50 26 chr10 25684323 25685081 -114631684 - L1MB3 LINE L1 -8 6175 5437 2275 122 0 0 chr10 25685081 25685393 -114631372 - AluSx SINE Alu 0 312 1 3875 198 50 26 chr10 25685393 25686142 -114630623 - L1MB3 LINE L1 -746 5437 4635 303 214 0 0 chr10 25686181 25686251 -114630514 + CT-rich Low_complexity Low_complexity 1 70 0 1716 158 0 0 chr10 25686251 25686511 -114630254 - AluSq SINE Alu -1 312 53 2893 180 30 2 chr10 25686511 25687155 -114629610 - L1MB3 LINE L1 -1504 4642 3981 276 305 78 16 chr10 25687268 25687396 -114629369 + MIR SINE MIR 6 141 -121 961 127 0 0 chr10 25688235 25688361 -114628404 + FLAM_C SINE Alu 1 126 -17 1093 180 9 73 chr10 25688545 25688778 -114627987 + AluJo SINE Alu 1 218 -94 3081 142 9 4 chr10 25688842 25689393 -114627372 - L1P LINE L1 -3004 3142 2589 11371 112 24 6 chr10 25689393 25689697 -114627068 + L1PA8A LINE L1 3199 3496 -2650 195 42 0 0 chr10 25689697 25689721 -114627044 + (CAA)n Simple_repeat Simple_repeat 1 24 0 11371 112 24 6 chr10 25689721 25691279 -114625486 + L1PA8A LINE L1 3496 5094 -1052 454 141 0 0 chr10 25691353 25691431 -114625334 - MSTB1 LTR MaLR 0 432 355 5956 74 16 0 chr10 25691490 25692474 -114624291 + L1PA8A LINE L1 5098 6095 -36 440 111 0 37 chr10 25692506 25692587 -114624178 - MSTB1 LTR MaLR 0 432 355 2371 38 72 0 chr10 25692759 25693049 -114623716 - AluY SINE Alu 0 311 1 1705 148 71 41 chr10 25693096 25693460 -114623305 + THE1C LTR MaLR 1 375 0 2115 143 0 9 chr10 25694120 25694468 -114622297 - AluSx SINE Alu 0 345 1 836 135 0 57 chr10 25695030 25695171 -114621594 + FLAM_C SINE Alu 1 133 -10 442 281 0 25 chr10 25695955 25696076 -114620689 + L2 LINE L2 3188 3305 -8 4102 132 6 60 chr10 25696554 25697283 -114619482 - LTR8 LTR ERV1 0 691 3 300 272 126 0 chr10 25699144 25699247 -114617518 - MLT1J2 LTR MaLR -61 389 274 410 226 198 11 chr10 25699280 25699457 -114617308 - MLT1J1 LTR MaLR -236 210 1 311 26 0 0 chr10 25700431 25700469 -114616296 + U2 snRNA snRNA 1 38 -150 7599 25 4 0 chr10 25700791 25701727 -114615038 - L1P LINE L1 -1245 4901 3962 1119 318 64 7 chr10 25701923 25702548 -114614217 + MER115 DNA AcHobo 1 692 -1 254 239 65 154 chr10 25702770 25703063 -114613702 - L2 LINE L2 -739 2575 2309 180 0 0 0 chr10 25703916 25703936 -114612829 + (TA)n Simple_repeat Simple_repeat 2 21 0 39 68 0 0 chr10 25704123 25704197 -114612568 + AT_rich Low_complexity Low_complexity 1 74 0 2175 118 0 10 chr10 25704256 25704560 -114612205 - AluSx SINE Alu -11 301 1 3391 129 63 3 chr10 25704642 25705240 -114611525 - LTR24C LTR ERV1 -1 634 1 2178 118 7 3 chr10 25705510 25705815 -114610950 - AluSg SINE Alu -3 307 2 1986 184 36 2 chr10 25706053 25706466 -114610299 - MER89 LTR ERV1 -131 428 2 394 281 48 0 chr10 25706469 25706615 -114610150 - L1ME3A LINE L1 -329 5841 5689 1780 178 40 0 chr10 25707349 25707670 -114609095 + MER7A DNA MER2_type 12 343 -3 7954 197 49 47 chr10 25707728 25708277 -114608488 - L1MA10 LINE L1 -43 6527 5981 2167 97 0 0 chr10 25708277 25708555 -114608210 - AluSq SINE Alu -33 280 3 7954 197 49 47 chr10 25708555 25710013 -114606752 - L1MA10 LINE L1 -589 5981 4527 1690 146 0 4 chr10 25710013 25710274 -114606491 - AluSx SINE Alu -17 295 36 7954 197 49 47 chr10 25710274 25710665 -114606100 - L1MA10 LINE L1 -2043 4527 4138 1489 126 31 0 chr10 25710665 25710888 -114605877 + MER30 DNA MER1_type 1 230 0 7954 197 49 47 chr10 25710888 25711614 -114605151 - L1MA10 LINE L1 -2432 4138 3393 1219 239 35 37 chr10 25711611 25712374 -114604391 - L1MA10 LINE L1 -3588 2794 2030 * 449 351 76 54 chr10 25712477 25713076 -114603689 + L2 LINE L2 2589 3198 -74 202 225 0 0 chr10 25713117 25713157 -114603608 + (CATA)n Simple_repeat Simple_repeat 3 42 0 196 287 181 11 chr10 25713160 25713254 -114603511 + MIR3 SINE MIR 47 156 -52 210 302 23 47 chr10 25714865 25714951 -114601814 - L2 LINE L2 0 3272 3189 1710 203 3 13 chr10 25715489 25715800 -114600965 + AluJo SINE Alu 1 308 -4 322 315 101 39 chr10 25715870 25716048 -114600717 - MIR3 SINE MIR -7 201 13 444 372 13 13 chr10 25716972 25717203 -114599562 + MIR SINE MIR 22 252 -10 327 311 0 0 chr10 25717481 25717571 -114599194 - L1MC4 LINE L1 -1339 6703 6614 686 119 53 35 chr10 25717596 25717866 -114598899 + (CATATA)n Simple_repeat Simple_repeat 1 274 0 307 318 0 0 chr10 25717869 25717957 -114598808 - L1MC4 LINE L1 -1341 6701 6614 * 361 197 46 0 chr10 25717941 25718050 -114598715 - L1MCa LINE L1 -1339 6983 1995 344 273 23 0 chr10 25717975 25718063 -114598702 + L1MC4 LINE L1 6614 6703 -1339 * 313 244 47 23 chr10 25718069 25718155 -114598610 - L1MC4 LINE L1 -1339 6703 6616 251 231 0 22 chr10 25718156 25718247 -114598518 - L1MC4 LINE L1 -1340 6702 6614 251 157 20 0 chr10 25718248 25718299 -114598466 + (TA)n Simple_repeat Simple_repeat 2 53 0 198 0 0 0 chr10 25718300 25718322 -114598443 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1625 176 3 7 chr10 25718327 25718611 -114598154 - AluJb SINE Alu -29 283 1 844 207 17 81 chr10 25718823 25719181 -114597584 - L1MC5 LINE L1 -48 7913 7579 2323 87 0 34 chr10 25720056 25720378 -114596387 - AluY SINE Alu 0 311 1 3294 177 81 30 chr10 25722908 25723653 -114593112 - LTR39 LTR ERV1 0 783 1 416 252 52 26 chr10 25723776 25723891 -114592874 + MIR SINE MIR 37 154 -108 306 0 0 0 chr10 25723917 25723951 -114592814 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2121 127 3 0 chr10 25723956 25724239 -114592526 - AluSx SINE Alu -28 284 1 1450 182 4 16 chr10 25724443 25724696 -114592069 - AluJo SINE Alu -26 286 37 380 288 94 24 chr10 25724878 25725034 -114591731 - MIR SINE MIR -74 188 18 2107 130 140 8 chr10 25725034 25725412 -114591353 - MSTA LTR MaLR 0 428 1 380 288 94 24 chr10 25725412 25725425 -114591340 - MIR SINE MIR -244 18 7 2142 153 67 21 chr10 25726458 25726890 -114589875 - MLT1C LTR MaLR -15 452 1 6050 64 0 4 chr10 25728285 25729064 -114587701 + L1PA7 LINE L1 5376 6151 -3 524 272 131 15 chr10 25729192 25729398 -114587367 - MIR SINE MIR 0 262 33 469 234 32 24 chr10 25730489 25730613 -114586152 - MIR SINE MIR -24 238 114 795 285 98 30 chr10 25730811 25731239 -114585526 + LTR16A LTR ERVL 1 457 0 195 42 0 0 chr10 25731452 25731476 -114585289 + (CA)n Simple_repeat Simple_repeat 1 24 0 4656 105 10 31 chr10 25732487 25733261 -114583504 + L1PA13 LINE L1 5400 6157 -6 2033 96 68 7 chr10 25733308 25733601 -114583164 + AluSq SINE Alu 1 311 -2 651 336 111 38 chr10 25735247 25735771 -114580994 + L1MEd LINE L1 458 1019 -5511 333 242 91 28 chr10 25736115 25736367 -114580398 + L1MEd LINE L1 1345 1612 -4918 469 330 57 9 chr10 25736407 25736634 -114580131 + HAL1 LINE L1 1361 1598 -909 379 286 93 6 chr10 25737017 25737199 -114579566 + L1MEd LINE L1 2384 2581 -3959 243 223 69 34 chr10 25737202 25737377 -114579388 + L1M4 LINE L1 4249 4429 -1717 2178 135 8 3 chr10 25737416 25737771 -114578994 + MER47A DNA MER2_type 1 357 -9 275 237 11 0 chr10 25737772 25737865 -114578900 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 * 282 149 18 54 chr10 25737852 25738020 -114578745 + (TA)n Simple_repeat Simple_repeat 1 162 0 225 97 65 32 chr10 25738032 25738094 -114578671 + (CTATA)n Simple_repeat Simple_repeat 2 65 0 2767 180 160 31 chr10 25738593 25739442 -114577323 - L1MB7 LINE L1 -2 6182 5227 604 277 88 36 chr10 25739559 25739978 -114576787 - L1ME4a LINE L1 -202 5919 5479 247 287 35 27 chr10 25740420 25740569 -114576196 + MIR SINE MIR 18 259 -3 193 286 0 71 chr10 25741284 25741368 -114575397 - MIR3 SINE MIR -6 202 125 26 0 0 27 chr10 25741440 25741457 -114575308 + AT_rich Low_complexity Low_complexity 1 17 -19 2536 65 0 0 chr10 25741457 25741764 -114575001 + AluY SINE Alu 1 307 -4 26 0 0 27 chr10 25741764 25741783 -114574982 + AT_rich Low_complexity Low_complexity 17 36 0 1638 112 4 4 chr10 25742365 25742619 -114574146 - AluSg/x SINE Alu 0 310 67 532 107 13 0 chr10 25742619 25742694 -114574071 + AluS SINE Alu 5 80 -232 331 315 9 18 chr10 25743513 25743624 -114573141 - MIR3 SINE MIR -2 206 97 911 194 0 13 chr10 25743902 25744057 -114572708 + AluJo SINE Alu 1 153 -159 375 278 0 0 chr10 25744073 25744163 -114572602 - L1MC4 LINE L1 -1339 6703 6614 347 300 0 0 chr10 25744089 25744179 -114572586 + L1MC4 LINE L1 6614 6703 -1339 * 225 178 0 0 chr10 25744185 25744230 -114572535 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 85 71 7 chr10 25744326 25744467 -114572298 + (TA)n Simple_repeat Simple_repeat 1 150 0 865 301 48 0 chr10 25745213 25745502 -114571263 + MLT1J LTR MaLR 1 303 -208 280 333 131 18 chr10 25745894 25746062 -114570703 + MIR3 SINE MIR 20 206 -2 375 23 0 0 chr10 25747188 25747232 -114569533 + (TG)n Simple_repeat Simple_repeat 1 44 0 2153 188 25 58 chr10 25749212 25749743 -114567022 - MLT1E2 LTR MaLR -111 515 3 220 333 0 32 chr10 25749971 25750064 -114566701 + GA-rich Low_complexity Low_complexity 4 93 0 1753 172 0 13 chr10 25750086 25750394 -114566371 + AluJb SINE Alu 3 306 -6 2426 87 6 0 chr10 25750442 25750753 -114566012 + AluSq SINE Alu 1 313 0 269 50 0 25 chr10 25750753 25750793 -114565972 + (TA)n Simple_repeat Simple_repeat 1 39 0 399 310 16 0 chr10 25750903 25751032 -114565733 - MER94 DNA DNA -2 132 2 453 313 58 50 chr10 25751846 25752105 -114564660 + MIR SINE MIR 1 261 -1 488 128 21 64 chr10 25752492 25752586 -114564179 + AluJo SINE Alu 128 217 -95 240 297 74 74 chr10 25753006 25753154 -114563611 - L2 LINE L2 0 3272 3125 697 213 40 23 chr10 25753212 25753386 -114563379 + MER5B DNA MER1_type 2 178 0 354 250 0 0 chr10 25753613 25753681 -114563084 - L2 LINE L2 -11 3302 3235 331 330 80 17 chr10 25753710 25753886 -114562879 + MER5A DNA MER1_type 3 189 0 185 281 46 78 chr10 25753952 25754105 -114562660 - L2 LINE L2 -219 3053 2906 205 191 0 21 chr10 25756683 25756730 -114560035 + GA-rich Low_complexity Low_complexity 1 46 0 510 114 0 0 chr10 25756761 25756840 -114559925 + (TAGG)n Simple_repeat Simple_repeat 1 79 0 270 95 0 0 chr10 25756916 25756958 -114559807 + (CA)n Simple_repeat Simple_repeat 2 43 0 885 186 166 77 chr10 25757209 25757616 -114559149 + L1 LINE L1 4950 5391 -775 337 225 0 25 chr10 25757873 25757953 -114558812 - HAL1b LINE L1 -437 911 834 3369 213 70 22 chr10 25758011 25758824 -114557941 - MER21B LTR ERV1 -11 852 1 2076 110 120 3 chr10 25758840 25759166 -114557599 - THE1B LTR MaLR 0 364 1 532 254 15 0 chr10 25759226 25759356 -114557409 + MIR SINE MIR 131 262 0 1044 106 14 0 chr10 25759450 25759591 -114557174 + AluSg/x SINE Alu 156 298 -14 306 305 99 46 chr10 25759810 25759961 -114556804 - L1MEd LINE L1 -4905 1214 1056 635 262 57 9 chr10 25760479 25760689 -114556076 - L2 LINE L2 0 3313 3094 1043 241 147 105 chr10 25760767 25761461 -114555304 - L2 LINE L2 -728 2586 1864 719 82 49 8 chr10 25762008 25762130 -114554635 + MLT1B LTR MaLR 1 127 -263 1034 143 11 0 chr10 25762427 25762609 -114554156 + MLT1B LTR MaLR 131 314 -76 1174 185 0 151 chr10 25762620 25762737 -114554028 - L1PB4 LINE L1 0 6156 6023 1749 137 29 22 chr10 25762737 25763014 -114553751 + AluJb SINE Alu 1 279 -33 1174 185 0 151 chr10 25763014 25763280 -114553485 - L1PB4 LINE L1 -133 6023 5831 475 157 34 12 chr10 25763282 25763387 -114553378 + MLT1B LTR MaLR 300 388 -2 1752 192 0 23 chr10 25763633 25763935 -114552830 - AluJb SINE Alu -17 295 1 373 312 148 8 chr10 25764185 25764422 -114552343 - L1ME LINE L1 -333 5788 5519 2066 141 10 0 chr10 25764550 25764855 -114551910 - AluSx SINE Alu -4 308 1 2283 114 3 0 chr10 25766252 25766549 -114550216 - AluSq SINE Alu -15 298 1 744 344 20 4 chr10 25766991 25767244 -114549521 + MIR SINE MIR 6 262 0 447 273 43 22 chr10 25767322 25767461 -114549304 - L2 LINE L2 -297 3016 2875 2050 132 0 0 chr10 25767922 25768261 -114548504 - AluSx SINE Alu 0 340 2 1164 288 58 27 chr10 25769783 25770476 -114546289 - HAL1 LINE L1 -1734 773 10 557 325 150 15 chr10 25770479 25770834 -114545931 + L2 LINE L2 1813 2119 -1195 19888 94 23 3 chr10 25770834 25774549 -114542216 - L1PA7 LINE L1 0 6154 2377 557 325 150 15 chr10 25774549 25774848 -114541917 + L2 LINE L2 2119 2555 -759 400 292 92 0 chr10 25775047 25775167 -114541598 + L2 LINE L2 3142 3272 0 738 94 0 0 chr10 25775674 25775780 -114540985 + L1PA5 LINE L1 6048 6153 -1 275 330 93 25 chr10 25776581 25776699 -114540066 + L2 LINE L2 3141 3266 -6 1827 124 148 9 chr10 25776769 25777108 -114539657 - MSTA LTR MaLR 0 428 43 41645 41 2 1 chr10 25777108 25783249 -114533516 - L1PA3 LINE L1 -1 6154 10 313 185 0 0 chr10 25783258 25783312 -114533453 - MSTA LTR MaLR -374 54 1 331 280 120 63 chr10 25783619 25783794 -114532971 - MER5A DNA MER1_type -4 185 1 209 191 0 0 chr10 25783897 25783939 -114532826 + (TATG)n Simple_repeat Simple_repeat 2 43 0 197 294 0 0 chr10 25784274 25784325 -114532440 + MIR SINE MIR 103 153 -55 260 208 0 14 chr10 25784516 25784588 -114532177 + (TA)n Simple_repeat Simple_repeat 2 72 0 264 154 0 0 chr10 25785209 25785261 -114531504 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 238 286 0 0 chr10 25785336 25785392 -114531373 + MIR3 SINE MIR 151 206 -2 1944 184 3 0 chr10 25786924 25787307 -114529458 - AluJb SINE Alu 0 384 1 2793 213 38 7 chr10 25787477 25788084 -114528681 + MLT1E2 LTR MaLR 1 626 0 464 317 30 18 chr10 25788758 25788925 -114527840 - L2 LINE L2 -436 2878 2710 436 268 23 5 chr10 25789166 25789303 -114527462 + MIR SINE MIR 56 192 -58 898 202 93 75 chr10 25789408 25789794 -114526971 + MSTD LTR MaLR 1 393 -3 531 293 130 19 chr10 25790086 25790167 -114526598 - MIR SINE MIR -24 238 167 288 0 0 0 chr10 25790167 25790199 -114526566 + (TTA)n Simple_repeat Simple_repeat 2 33 0 531 293 130 19 chr10 25790199 25790325 -114526440 - MIR SINE MIR -95 167 8 21 0 0 0 chr10 25790509 25790530 -114526235 + AT_rich Low_complexity Low_complexity 1 21 0 285 51 0 0 chr10 25790608 25790647 -114526118 + (CA)n Simple_repeat Simple_repeat 2 40 0 2199 161 19 38 chr10 25790780 25791202 -114525563 - MLT2D LTR ERVL 0 414 1 265 310 34 56 chr10 25791284 25791552 -114525213 - L1MC/D LINE L1 -2264 5544 5283 7675 24 4 2 chr10 25792943 25794184 -114522581 - L1PA3 LINE L1 0 6155 4915 379 42 0 0 chr10 25794185 25794233 -114522532 + 5S rRNA rRNA 1 48 -73 270 0 0 0 chr10 25795219 25795249 -114521516 + (T)n Simple_repeat Simple_repeat 1 30 0 300 329 19 52 chr10 25795457 25795612 -114521153 + MIR3 SINE MIR 20 169 -39 705 282 75 9 chr10 25796669 25796882 -114519883 - MIR SINE MIR -15 247 21 314 291 28 85 chr10 25796947 25797088 -114519677 - MIR SINE MIR -83 179 47 228 111 0 0 chr10 25797088 25797124 -114519641 + (T)n Simple_repeat Simple_repeat 1 36 0 4963 165 28 7 chr10 25798698 25799627 -114517138 - L1MC1 LINE L1 0 6333 5385 1371 151 12 4 chr10 25800058 25800303 -114516462 - MLT2D LTR ERVL -167 247 1 265 310 34 56 chr10 25800385 25800653 -114516112 - L1MC/D LINE L1 -2264 5544 5283 18292 34 0 0 chr10 25802045 25805033 -114511732 - L1PA3 LINE L1 0 6155 3166 341 300 0 36 chr10 25805957 25806067 -114510698 - MIR3 SINE MIR -3 205 100 851 183 7 108 chr10 25807737 25808016 -114508749 + MLT1A1 LTR MaLR 115 365 0 183 281 56 11 chr10 25808329 25808418 -114508347 + MIR SINE MIR 47 139 -123 252 143 0 0 chr10 25808780 25808822 -114507943 + (A)n Simple_repeat Simple_repeat 1 42 0 370 298 78 27 chr10 25808889 25809080 -114507685 + MIR SINE MIR 9 213 -49 892 246 106 47 chr10 25809080 25809466 -114507299 + MLT1I LTR MaLR 1 409 0 370 298 78 27 chr10 25809466 25809516 -114507249 + MIR SINE MIR 213 259 -3 1751 230 37 7 chr10 25810100 25810561 -114506204 + MER39 LTR ERV1 233 707 0 1256 108 0 0 chr10 25811512 25811698 -114505067 - L1PA12 LINE L1 -191 5977 5792 820 239 86 17 chr10 25812652 25813490 -114503275 - L1ME3A LINE L1 -70 6100 5216 267 264 34 34 chr10 25813712 25813860 -114502905 - L1ME3A LINE L1 -1812 4334 4187 * 504 266 54 20 chr10 25813849 25814052 -114502713 - L1ME3A LINE L1 -2462 3684 3475 681 348 13 16 chr10 25815061 25815324 -114501441 - MIR SINE MIR 0 262 3 187 286 143 48 chr10 25815401 25815527 -114501238 + L2 LINE L2 3100 3237 -35 1017 274 134 25 chr10 25815707 25816177 -114500588 - LTR33 LTR ERVL 0 521 1 204 229 0 0 chr10 25816265 25816313 -114500452 - L2 LINE L2 -1 3312 3265 345 360 22 29 chr10 25818463 25818602 -114498163 - MIR3 SINE MIR -17 191 54 283 274 104 2 chr10 25819593 25819744 -114497021 - MER20B DNA MER1_type -586 197 1 2072 139 3 10 chr10 25819798 25820107 -114496658 + AluSx SINE Alu 1 307 -5 321 253 0 0 chr10 25820107 25820195 -114496570 + GA-rich Low_complexity Low_complexity 6 96 0 275 272 12 0 chr10 25820211 25820292 -114496473 - MER112 DNA MER1_type -84 176 95 1862 193 55 84 chr10 25820658 25821536 -114495229 + L1MB2 LINE L1 5376 6184 0 214 189 19 0 chr10 25821747 25821776 -114494989 + (TA)n Simple_repeat Simple_repeat 1 33 -21 207 0 0 0 chr10 25821776 25821799 -114494966 + (TG)n Simple_repeat Simple_repeat 2 24 0 214 189 19 0 chr10 25821799 25821822 -114494943 + (TA)n Simple_repeat Simple_repeat 33 54 0 24 0 0 0 chr10 25822161 25822185 -114494580 + AT_rich Low_complexity Low_complexity 1 24 0 1258 48 0 0 chr10 25823952 25824097 -114492668 - L1PA3 LINE L1 -3 6152 6008 254 231 16 83 chr10 25824617 25824738 -114492027 - 7SK RNA RNA -69 124 12 2419 93 0 0 chr10 25824823 25825125 -114491640 - AluSx SINE Alu -10 302 1 2072 120 0 74 chr10 25825347 25825673 -114491092 - AluSx SINE Alu -10 302 1 2027 163 34 29 chr10 25827307 25827349 -114489416 - L1M4 LINE L1 -539 5645 5605 2179 117 3 3 chr10 25827349 25827656 -114489109 - AluSq SINE Alu -6 307 1 2027 163 34 29 chr10 25827656 25828119 -114488646 - L1M4 LINE L1 -579 5605 5135 2060 132 83 37 chr10 25828119 25828467 -114488298 - THE1B LTR MaLR 0 364 1 2027 163 34 29 chr10 25828467 25828609 -114488156 - L1M4 LINE L1 -1049 5135 4995 * 2092 174 10 22 chr10 25828607 25829010 -114487755 + L1MA7 LINE L1 5791 6188 -103 831 149 0 0 chr10 25829012 25829146 -114487619 + MER4B LTR ERV1 1 134 -476 1723 171 47 11 chr10 25829148 25829510 -114487255 - MER50 LTR ERV1 -23 711 337 1440 152 8 29 chr10 25831829 25832073 -114484692 + AluJo SINE Alu 25 263 -49 180 352 62 31 chr10 25832960 25833122 -114483643 - MIR3 SINE MIR -26 182 16 2403 152 10 2 chr10 25833540 25833935 -114482830 - L1PA16 LINE L1 0 6166 5769 4674 66 0 2 chr10 25833935 25834495 -114482270 - L1PA6 LINE L1 0 6154 5593 2466 165 28 28 chr10 25834804 25835229 -114481536 + MSTB LTR MaLR 1 425 -1 400 256 188 23 chr10 25835304 25835437 -114481328 - MER5B DNA MER1_type -1 177 23 269 209 75 0 chr10 25835580 25835647 -114481118 - MIR SINE MIR -135 127 56 270 186 0 0 chr10 25836485 25836528 -114480237 + tRNA-Leu-CTT tRNA tRNA 1 43 -42 1836 127 28 3 chr10 25836534 25836817 -114479948 + AluSc SINE Alu 1 290 -19 7098 71 2 14 chr10 25836839 25837186 -114479579 + L1PA7 LINE L1 5026 5376 -778 2230 119 0 31 chr10 25837186 25837505 -114479260 + AluSc SINE Alu 1 309 0 7098 71 2 14 chr10 25837505 25838255 -114478510 + L1PA7 LINE L1 5376 6138 -16 261 0 0 0 chr10 25838460 25838489 -114478276 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 1506 167 8 12 chr10 25838489 25838739 -114478026 - AluJb SINE Alu -55 257 7 316 264 28 0 chr10 25838739 25838811 -114477954 + MIR3 SINE MIR 85 158 -50 311 340 116 73 chr10 25838806 25839176 -114477589 + L2 LINE L2 2881 3266 -6 * 644 240 27 38 chr10 25839187 25839370 -114477395 - L2 LINE L2 0 3313 3133 467 341 44 36 chr10 25839975 25840227 -114476538 + MIR SINE MIR 8 261 -1 186 43 0 0 chr10 25842035 25842058 -114474707 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 226 434 7 0 chr10 25842731 25842867 -114473898 - L2 LINE L2 -189 3083 2947 1820 158 4 4 chr10 25842989 25843268 -114473497 - AluJo SINE Alu -23 289 11 241 185 31 0 chr10 25843719 25843784 -114472981 + GA-rich Low_complexity Low_complexity 3 69 0 1009 197 8 38 chr10 25844112 25844351 -114472414 + L1MD3 LINE L1 7763 7994 -1 2012 145 7 0 chr10 25845355 25845652 -114471113 + AluSc SINE Alu 1 299 -10 185 132 26 0 chr10 25845676 25845714 -114471051 + CT-rich Low_complexity Low_complexity 3 41 0 509 246 0 74 chr10 25846469 25846644 -114470121 - L2 LINE L2 -2 3311 3150 * 580 225 130 12 chr10 25846635 25846804 -114469961 - MIR SINE MIR -57 205 17 349 312 132 11 chr10 25846847 25847108 -114469657 - L2 LINE L2 -236 3077 2782 23 0 0 0 chr10 25847117 25847140 -114469625 + AT_rich Low_complexity Low_complexity 1 23 0 4177 125 36 5 chr10 25847296 25847929 -114468836 - L1PA16 LINE L1 0 6166 5514 1872 157 0 9 chr10 25847929 25848253 -114468512 - L1P4 LINE L1 -573 5593 5273 465 320 69 10 chr10 25849927 25850130 -114466635 + MIR SINE MIR 48 262 0 21 36 0 0 chr10 25850499 25850527 -114466238 + AT_rich Low_complexity Low_complexity 1 28 0 441 0 0 0 chr10 25851450 25851499 -114465266 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1735 276 18 12 chr10 25852725 25853235 -114463530 - L1MEc LINE L1 -5847 549 37 1854 146 24 0 chr10 25853762 25854050 -114462715 + AluSq SINE Alu 1 295 -18 1735 207 32 45 chr10 25854113 25854553 -114462212 - MLT1C LTR MaLR 0 467 34 427 227 25 8 chr10 25854600 25854719 -114462046 + LTR33 LTR ERVL 1 121 -400 293 250 25 145 chr10 25905892 25905939 -114410826 - MER5B DNA MER1_type 0 189 138 2131 122 27 0 chr10 25905939 25906235 -114410530 - AluSx SINE Alu -8 304 1 293 250 25 145 chr10 25906235 25906387 -114410378 - MER5B DNA MER1_type -51 138 3 2168 202 7 0 chr10 25906483 25906898 -114409867 + MER47B DNA MER2_type 1 418 0 231 223 8 15 chr10 25906898 25907022 -114409743 + (TA)n Simple_repeat Simple_repeat 2 124 0 301 133 0 50 chr10 25907024 25907084 -114409681 + MLT2B1 LTR ERVL 464 520 0 267 291 176 20 chr10 25908032 25908231 -114408534 - MIR SINE MIR -13 249 20 198 148 16 33 chr10 25908708 25908769 -114407996 + (CA)n Simple_repeat Simple_repeat 1 60 0 1466 251 51 37 chr10 25912160 25912832 -114403933 - HAL1 LINE L1 -770 1737 1057 258 32 0 0 chr10 25913275 25913306 -114403459 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 237 65 0 0 chr10 25913412 25913443 -114403322 + (ATG)n Simple_repeat Simple_repeat 2 32 0 757 305 12 31 chr10 25913445 25913588 -114403177 - MIR SINE MIR -8 254 117 1686 138 202 17 chr10 25913588 25913949 -114402816 - MSTA LTR MaLR 0 428 1 757 305 12 31 chr10 25913949 25914061 -114402704 - MIR SINE MIR -145 117 4 198 143 0 0 chr10 25914396 25914431 -114402334 + (CA)n Simple_repeat Simple_repeat 2 36 0 253 267 62 62 chr10 25914523 25914669 -114402096 + MIR SINE MIR 66 211 -51 2089 135 3 0 chr10 25915638 25915934 -114400831 + AluSx SINE Alu 1 297 -15 2494 76 0 0 chr10 25915940 25916244 -114400521 + AluSg SINE Alu 1 304 -6 926 94 0 0 chr10 25916598 25916726 -114400039 - L1PA7 LINE L1 -1 6153 6026 5110 58 6 0 chr10 25916733 25917917 -114398848 - L1PA7 LINE L1 -236 5918 4730 5948 96 9 0 chr10 25918117 25919221 -114397544 - L1PB2 LINE L1 0 6151 5074 259 333 65 32 chr10 25920805 25920819 -114395946 - L2 LINE L2 -7 3265 3253 207 0 0 0 chr10 25920819 25920842 -114395923 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 259 333 65 32 chr10 25920842 25920950 -114395815 - L2 LINE L2 -19 3253 3139 679 261 37 29 chr10 25921367 25921612 -114395153 - L2 LINE L2 -924 2390 2144 2212 157 30 3 chr10 25921810 25922148 -114394617 - MER7A DNA MER2_type 0 346 2 1742 199 0 0 chr10 25922175 25922477 -114394288 + AluJb SINE Alu 2 303 -9 22 0 0 0 chr10 25923138 25923160 -114393605 + AT_rich Low_complexity Low_complexity 1 22 0 812 188 0 0 chr10 25923391 25923540 -114393225 + FRAM SINE Alu 23 171 -5 560 293 78 27 chr10 25923772 25924185 -114392580 + L1MEd LINE L1 595 1028 -5091 1475 158 165 11 chr10 25924192 25924452 -114392313 + AluJo SINE Alu 1 300 -2 1953 167 21 0 chr10 25924459 25924788 -114391977 - L1MB1 LINE L1 -4 6400 6065 11248 193 43 19 chr10 25924788 25926759 -114390006 - L1MB1 LINE L1 -721 5683 3627 2052 85 48 0 chr10 25926759 25927052 -114389713 - AluYa5 SINE Alu 0 306 1 11248 193 43 19 chr10 25927052 25927676 -114389089 - L1MB1 LINE L1 -2777 3627 3020 1128 219 29 33 chr10 25927700 25927942 -114388823 + AluJo SINE Alu 1 241 -71 608 238 63 16 chr10 25928021 25928210 -114388555 - L1MB1 LINE L1 -3386 2996 2799 * 1909 269 35 15 chr10 25928200 25929327 -114387438 - L1MB1 LINE L1 -4024 2358 1257 * 44886 42 1 1 chr10 25929325 25935479 -114381286 - L1PA4 LINE L1 0 6155 1 2282 284 58 40 chr10 25935479 25936990 -114379775 - L1M3d LINE L1 -4819 1072 1 1660 162 0 18 chr10 25937010 25937288 -114379477 - AluJo SINE Alu 0 312 40 470 285 10 31 chr10 25937290 25937483 -114379282 + L1MEd LINE L1 1025 1213 -4906 29 70 0 0 chr10 25939053 25939110 -114377655 + AT_rich Low_complexity Low_complexity 1 57 0 1660 194 0 10 chr10 25939223 25939512 -114377253 - AluJo SINE Alu -22 290 5 188 319 50 34 chr10 25939892 25940011 -114376754 - L2 LINE L2 -557 2757 2637 1367 167 4 4 chr10 25940049 25940276 -114376489 + AluJb SINE Alu 86 312 0 389 271 95 50 chr10 25940432 25940694 -114376071 - L2 LINE L2 -822 2492 2219 222 304 108 21 chr10 25940854 25941048 -114375717 + L3 LINE CR1 1233 1443 -134 2022 120 3 30 chr10 25941249 25941577 -114375188 + AluSx SINE Alu 1 312 0 1692 199 16 0 chr10 25941848 25942185 -114374580 - AluJb SINE Alu 0 342 1 414 0 0 0 chr10 25942306 25942352 -114374413 + (CA)n Simple_repeat Simple_repeat 2 47 0 281 130 65 0 chr10 25942529 25942575 -114374190 - AluJ/FRAM SINE Alu -26 276 228 2333 105 0 0 chr10 25942786 25943090 -114373675 - AluSx SINE Alu -8 304 1 284 289 62 39 chr10 25943771 25943899 -114372866 - MIR3 SINE MIR -68 140 10 2107 150 0 10 chr10 25944049 25944363 -114372402 - AluSx SINE Alu -1 311 1 6336 114 20 5 chr10 25944365 25945331 -114371434 - L1PA11 LINE L1 -8 6166 5198 242 318 204 0 chr10 25945731 25945863 -114370902 + MIR3 SINE MIR 47 205 -3 1520 121 70 0 chr10 25948800 25949015 -114367750 + MER30 DNA MER1_type 1 230 0 6230 89 11 8 chr10 25949421 25950290 -114366475 - L1PA10 LINE L1 0 6168 5297 181 379 0 0 chr10 25950543 25950609 -114366156 + MIR SINE MIR 52 117 -145 24 32 0 0 chr10 25950894 25950925 -114365840 + AT_rich Low_complexity Low_complexity 1 31 0 314 358 94 20 chr10 25950933 25951187 -114365578 - L2 LINE L2 -800 2514 2242 905 273 38 73 chr10 25951203 25951599 -114365166 + L2 LINE L2 2932 3313 0 233 172 86 0 chr10 25951598 25951656 -114365109 - MIR SINE MIR -19 243 181 * 504 308 40 12 chr10 25951672 25951919 -114364846 - L2 LINE L2 -1093 2221 1968 2569 33 3 3 chr10 25952097 25952399 -114364366 - AluY SINE Alu -9 302 1 1880 170 0 0 chr10 25952882 25953170 -114363595 + AluJb SINE Alu 6 293 -19 381 117 0 0 chr10 25955438 25955498 -114361267 + (TA)n Simple_repeat Simple_repeat 2 61 0 7961 35 0 0 chr10 25955498 25956919 -114359846 - L1PA5 LINE L1 -12 6142 4718 2419 72 3 0 chr10 25956919 25957225 -114359540 + L1PA5 LINE L1 4430 4736 -1410 1795 166 0 40 chr10 25957342 25957667 -114359098 - AluJo SINE Alu 0 312 1 248 325 98 44 chr10 25959167 25959555 -114357210 + L2 LINE L2 1496 1904 -1410 264 268 107 13 chr10 25959555 25960080 -114356685 + L1MD3 LINE L1 5589 6092 -74 445 31 16 16 chr10 25960080 25960144 -114356621 + (TG)n Simple_repeat Simple_repeat 1 64 0 264 268 107 13 chr10 25960144 25960194 -114356571 + L1MD3 LINE L1 6092 6136 -30 1659 179 14 21 chr10 25960194 25960351 -114356414 - AluJb SINE Alu -23 289 132 207 0 0 0 chr10 25960351 25960374 -114356391 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2095 118 0 3 chr10 25960374 25960661 -114356104 - AluSq SINE Alu -27 286 1 1659 179 14 21 chr10 25960661 25960792 -114355973 - AluJb SINE Alu -178 134 2 6265 21 0 0 chr10 25960842 25961514 -114355251 - L1PA3 LINE L1 -3 6152 5481 8457 54 0 8 chr10 25961514 25962573 -114354192 - L1P LINE L1 -5090 1056 7 1110 326 106 41 chr10 25962636 25963016 -114353749 + L2 LINE L2 1965 2319 -953 1616 188 10 17 chr10 25963016 25963308 -114353457 + AluJo SINE Alu 3 292 -20 1110 326 106 41 chr10 25963308 25964149 -114352616 + L2 LINE L2 2319 3263 -9 1491 200 46 14 chr10 25964460 25964745 -114352020 + AluJo SINE Alu 1 294 -18 324 0 0 0 chr10 25965915 25965951 -114350814 + (TG)n Simple_repeat Simple_repeat 2 37 0 1019 152 24 30 chr10 25965995 25966160 -114350605 + AluJo SINE Alu 105 268 -44 210 37 0 0 chr10 25966336 25966363 -114350402 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 3127 68 5 0 chr10 25966378 25966760 -114350005 - L1PA6 LINE L1 -1 6153 5770 230 0 33 0 chr10 25966760 25966790 -114349975 + (TA)n Simple_repeat Simple_repeat 2 32 0 2403 22 0 7 chr10 25966789 25967052 -114349713 - L1PA5 LINE L1 -3 6151 5884 248 0 0 30 chr10 25968238 25968271 -114348494 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 296 256 13 0 chr10 25968849 25968927 -114347838 + MER116 DNA Mariner 1 79 -1 856 209 41 0 chr10 25969076 25969248 -114347517 + L1MB7 LINE L1 5987 6165 -19 3859 211 24 15 chr10 25969251 25969986 -114346779 + L1MC/D LINE L1 4157 4920 -1344 2552 118 3 0 chr10 25969986 25970349 -114346416 + THE1B LTR MaLR 1 364 0 3859 211 24 15 chr10 25970349 25970955 -114345810 + L1MC/D LINE L1 4920 5519 -745 551 221 59 45 chr10 25970939 25971161 -114345604 + L1MC1 LINE L1 4664 4888 -1258 * 525 68 14 0 chr10 25971161 25971234 -114345531 + THE1C LTR MaLR 1 74 -301 4290 154 29 18 chr10 25971237 25972034 -114344731 + L1MC1 LINE L1 5528 6333 0 315 0 0 0 chr10 25972248 25972283 -114344482 + (ATG)n Simple_repeat Simple_repeat 3 37 0 456 233 39 39 chr10 25972873 25973002 -114343763 - L2 LINE L2 0 3313 3185 994 220 86 78 chr10 25973340 25973827 -114342938 + MLT1J LTR MaLR 2 492 -19 210 37 0 0 chr10 25974040 25974067 -114342698 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 5529 102 7 0 chr10 25974070 25974882 -114341883 - L1PA15 LINE L1 -1 6164 5347 1980 128 4 0 chr10 25976017 25976321 -114340444 - AluSx SINE Alu 0 305 1 901 188 12 0 chr10 25977057 25977222 -114339543 - AluJb SINE Alu -13 299 133 1548 154 6 111 chr10 25978956 25979288 -114337477 - AluJb SINE Alu -1 301 5 1263 176 157 49 chr10 25979615 25979766 -114336999 + MLT1C LTR MaLR 1 134 -408 2217 71 0 7 chr10 25979766 25980077 -114336688 - AluY SINE Alu 0 309 1 1263 176 157 49 chr10 25980077 25980339 -114336426 + MLT1C LTR MaLR 134 535 -7 833 187 35 6 chr10 25981031 25981202 -114335563 - MER45A DNA AcHobo 0 178 3 736 86 9 0 chr10 25981432 25981537 -114335228 + L1PA4 LINE L1 6042 6147 -8 244 308 106 0 chr10 25981715 25981819 -114334946 - L2 LINE L2 -25 3247 3133 524 313 123 21 chr10 25981839 25982439 -114334326 + L2 LINE L2 2636 3303 -10 306 271 21 21 chr10 25982949 25983045 -114333720 + MER81 DNA DNA 1 96 -18 670 206 0 0 chr10 25983527 25983653 -114333112 - MER58B DNA MER1_type -1 340 215 418 152 0 0 chr10 25983653 25983719 -114333046 + MER58B DNA MER1_type 264 329 -12 503 165 0 0 chr10 25983730 25983809 -114332956 - MER58A DNA MER1_type -28 79 1 285 171 21 15 chr10 25984343 25984425 -114332340 - AluSg SINE Alu -195 105 42 1820 145 34 24 chr10 25984468 25984764 -114332001 + AluJb SINE Alu 1 299 -13 857 143 30 6 chr10 25985107 25985275 -114331490 + L1PA15 LINE L1 5994 6165 0 2923 115 31 4 chr10 25989112 25989565 -114327200 - L1PA16 LINE L1 -3 6163 5699 345 393 66 6 chr10 25989702 25989885 -114326880 - MIR3 SINE MIR -1 207 14 21 36 0 0 chr10 25989913 25989941 -114326824 + AT_rich Low_complexity Low_complexity 1 28 0 210 122 61 20 chr10 25989992 25990041 -114326724 + (TATAA)n Simple_repeat Simple_repeat 2 52 0 291 28 0 0 chr10 25990238 25990274 -114326491 + (TG)n Simple_repeat Simple_repeat 1 36 0 302 295 62 15 chr10 25990329 25990625 -114326140 - L1ME3A LINE L1 -226 6180 5868 496 324 61 39 chr10 25990789 25991119 -114325646 - L1ME3A LINE L1 -904 5478 5142 696 286 78 20 chr10 25991167 25991760 -114325005 - L1ME3A LINE L1 -1890 4492 3839 2209 116 7 0 chr10 25991820 25992112 -114324653 + AluSg SINE Alu 1 294 -16 378 0 0 0 chr10 25992151 25992193 -114324572 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 313 86 25 chr10 25992196 25992394 -114324371 - L1ME3A LINE L1 -2643 3739 3530 397 304 36 36 chr10 25992632 25992879 -114323886 - L1ME3A LINE L1 -4749 1635 1389 484 302 105 30 chr10 25992879 25993537 -114323228 - L1ME3A LINE L1 -4894 1478 772 287 289 66 79 chr10 25993672 25993900 -114322865 - L1ME3A LINE L1 -5864 508 284 586 143 0 0 chr10 25997010 25997094 -114319671 - FRAM SINE Alu -26 150 67 1059 273 78 18 chr10 25998749 25999144 -114317621 - MLT1J2 LTR MaLR -31 419 1 2058 151 3 0 chr10 26000119 26000417 -114316348 + AluSx SINE Alu 1 299 -13 1899 166 0 10 chr10 26001409 26001705 -114315060 - AluJo SINE Alu -19 293 1 314 282 0 0 chr10 26001904 26001975 -114314790 + MIR SINE MIR 84 154 -108 369 285 127 36 chr10 26003673 26003926 -114312839 + MARNA DNA Mariner 269 544 -42 27 29 0 0 chr10 26004790 26004824 -114311941 + AT_rich Low_complexity Low_complexity 1 34 0 1595 191 27 3 chr10 26004976 26005275 -114311490 - AluJo SINE Alu -6 306 1 341 381 62 14 chr10 26005322 26005611 -114311154 - L1ME4a LINE L1 -236 5885 5583 398 308 65 32 chr10 26006136 26006369 -114310396 - L1ME4a LINE L1 -1219 4927 4681 507 339 18 41 chr10 26006383 26006570 -114310195 + MIR SINE MIR 15 198 -64 2673 179 89 54 chr10 26006570 26006906 -114309859 - MER44D DNA MER2_type -1882 605 357 2036 117 10 3 chr10 26006906 26007206 -114309559 + AluY SINE Alu 1 302 -9 2673 179 89 54 chr10 26007206 26007577 -114309188 - MER44D DNA MER2_type -2130 357 1 507 339 18 41 chr10 26007577 26007610 -114309155 + MIR SINE MIR 198 230 -32 317 291 211 36 chr10 26007777 26008024 -114308741 + L1MDa LINE L1 40 329 -6211 245 225 0 108 chr10 26008506 26008617 -114308148 + L1MDa LINE L1 909 1007 -5536 492 77 0 0 chr10 26008631 26008696 -114308069 + MLT1A2 LTR MaLR 258 322 -52 476 126 6 6 chr10 26008738 26008832 -114307933 + MLT1A1 LTR MaLR 296 365 0 1349 129 26 33 chr10 26008832 26009104 -114307661 - Charlie5 DNA MER1_type -110 2502 2233 765 133 0 16 chr10 26009314 26009442 -114307323 + L1PB4 LINE L1 6031 6156 0 2241 96 14 7 chr10 26010095 26010388 -114306377 - AluSx SINE Alu -17 295 1 1897 161 45 34 chr10 26012334 26012879 -114303886 - MLT2A2 LTR ERVL -1 553 2 1315 167 14 0 chr10 26013313 26013535 -114303230 + AluJb SINE Alu 85 309 -3 225 0 0 0 chr10 26013832 26013857 -114302908 + (A)n Simple_repeat Simple_repeat 1 25 0 189 149 0 164 chr10 26013862 26013929 -114302836 - MER5A DNA MER1_type -75 114 59 2230 113 33 0 chr10 26014386 26014688 -114302077 + AluSx SINE Alu 1 312 0 2526 140 16 21 chr10 26015212 26015640 -114301125 + MSTB LTR MaLR 1 426 0 1989 140 3 16 chr10 26016001 26016309 -114300456 - AluSx SINE Alu -8 304 1 29 47 0 0 chr10 26016401 26016444 -114300321 + AT_rich Low_complexity Low_complexity 1 43 0 1252 145 69 28 chr10 26016444 26016733 -114300032 + L1MA4 LINE L1 6000 6300 0 2145 130 10 0 chr10 26016833 26017140 -114299625 - AluSq SINE Alu -3 310 1 205 270 96 35 chr10 26018099 26018214 -114298551 - MIR SINE MIR -56 206 85 642 254 62 31 chr10 26018577 26018770 -114297995 - MIR3 SINE MIR -7 201 3 183 129 0 0 chr10 26018874 26018905 -114297860 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1814 134 3 59 chr10 26020670 26020784 -114295981 + AluJo SINE Alu 14 133 -179 2792 10 0 0 chr10 26020784 26021082 -114295683 - AluYa5 SINE Alu -13 298 1 1814 134 3 59 chr10 26021082 26021272 -114295493 + AluJo SINE Alu 133 301 -11 346 210 3 10 chr10 26021319 26021411 -114295354 + L1MB3 LINE L1 5879 5968 -203 1294 134 0 6 chr10 26021418 26021597 -114295168 + AluSx SINE Alu 1 178 -134 840 120 0 0 chr10 26021652 26021769 -114294996 + AluSx SINE Alu 183 299 -13 1061 172 14 9 chr10 26021770 26021985 -114294780 + L1MB3 LINE L1 5960 6175 -8 498 317 0 7 chr10 26022197 26022339 -114294426 - MIR3 SINE MIR -38 170 30 2080 127 3 7 chr10 26022364 26022663 -114294102 + AluSx SINE Alu 1 298 -14 452 208 13 67 chr10 26022792 26022855 -114293910 - L1MA10 LINE L1 0 6334 6272 2601 235 63 12 chr10 26022855 26023288 -114293477 - L1ME1 LINE L1 -44 6122 5713 2040 223 57 30 chr10 26023288 26023831 -114292934 + MER74A LTR ERVL 1 558 0 2601 235 63 12 chr10 26023831 26024425 -114292340 - L1ME1 LINE L1 -453 5713 5039 712 243 76 5 chr10 26024436 26024646 -114292119 + L1ME LINE L1 5330 5554 -612 553 166 137 2 chr10 26026177 26026320 -114290445 + L1ME LINE L1 5542 5666 -500 2207 88 0 14 chr10 26026323 26026619 -114290146 + AluY SINE Alu 1 292 -19 1986 207 50 53 chr10 26026678 26027340 -114289425 - L1ME1 LINE L1 -1131 5015 4356 1881 215 80 48 chr10 26029427 26029952 -114286813 - MLT1F LTR MaLR 0 542 1 302 327 18 18 chr10 26030057 26030222 -114286543 + MIR3 SINE MIR 31 195 -13 658 164 0 49 chr10 26030704 26030826 -114285939 + FLAM_A SINE Alu 5 120 -13 25 31 0 0 chr10 26030826 26030858 -114285907 + AT_rich Low_complexity Low_complexity 1 32 0 632 299 79 17 chr10 26031100 26031391 -114285374 + L2 LINE L2 3005 3313 0 1128 174 58 47 chr10 26033168 26033279 -114283486 + L1MA4 LINE L1 6022 6130 -170 1709 153 49 17 chr10 26033279 26033566 -114283199 + AluSx SINE Alu 1 296 -16 1128 174 58 47 chr10 26033566 26033729 -114283036 + L1MA4 LINE L1 6130 6299 -1 354 45 0 0 chr10 26034096 26034140 -114282625 + (TG)n Simple_repeat Simple_repeat 2 45 0 1437 185 182 3 chr10 26034568 26034881 -114281884 - MSTD LTR MaLR 0 396 28 280 274 154 10 chr10 26035037 26035238 -114281527 - MIR SINE MIR 0 262 33 182 324 49 29 chr10 26036089 26036191 -114280574 + L2 LINE L2 2793 2896 -418 225 270 270 0 chr10 26036247 26036358 -114280407 + L2 LINE L2 3105 3245 -68 1844 105 67 8 chr10 26038346 26038664 -114278101 + AluSp SINE Alu 1 334 0 535 318 14 14 chr10 26038714 26038925 -114277840 - MIR SINE MIR -15 247 37 787 316 16 0 chr10 26039241 26039491 -114277274 + MIR SINE MIR 9 262 0 3508 114 4 52 chr10 26039799 26040353 -114276412 + MER1A DNA MER1_type 1 527 0 792 224 33 17 chr10 26041306 26041514 -114275251 + MLT1C LTR MaLR 272 464 -3 2290 87 2 107 chr10 26041548 26041676 -114275089 - L1PB1 LINE L1 0 6151 6011 201 39 0 0 chr10 26041676 26041702 -114275063 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1977 126 3 18 chr10 26041702 26041988 -114274777 - AluSx SINE Alu -30 282 1 2290 87 2 107 chr10 26041988 26042259 -114274506 - L1PB1 LINE L1 -138 6013 5793 222 118 0 0 chr10 26042259 26042293 -114274472 + (TG)n Simple_repeat Simple_repeat 2 35 0 652 130 46 0 chr10 26042298 26042406 -114274359 - L1PB1 LINE L1 -251 5900 5788 8570 159 56 44 chr10 26042406 26044080 -114272685 - pTR5 LTR ERV1 -3 2435 743 360 0 0 0 chr10 26044085 26044125 -114272640 + (TA)n Simple_repeat Simple_repeat 2 41 0 1280 140 26 50 chr10 26044157 26044416 -114272349 - L1MC2 LINE L1 -328 5793 5583 192 304 14 0 chr10 26045138 26045207 -114271558 - MIR SINE MIR -72 190 121 915 212 113 92 chr10 26045801 26046047 -114270718 - MER34 LTR ERV1 0 542 303 2281 118 98 28 chr10 26046047 26046406 -114270359 + MSTA LTR MaLR 1 392 -36 2096 140 7 3 chr10 26046406 26046714 -114270051 - AluSx SINE Alu -3 309 1 2281 118 98 28 chr10 26046714 26046754 -114270011 + MSTA LTR MaLR 392 428 0 915 212 113 92 chr10 26046754 26047048 -114269717 - MER34 LTR ERV1 -239 303 1 1606 124 0 0 chr10 26047104 26047321 -114269444 - AluSg/x SINE Alu -3 307 91 622 315 126 38 chr10 26047869 26048755 -114268010 - L2 LINE L2 0 3272 2307 1957 126 0 21 chr10 26048981 26049266 -114267499 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 26049266 26049300 -114267465 + (CA)n Simple_repeat Simple_repeat 1 34 0 2435 188 58 0 chr10 26049704 26050135 -114266630 + MSTB2 LTR MaLR 2 457 0 210 233 14 27 chr10 26050201 26050274 -114266491 + CT-rich Low_complexity Low_complexity 1 72 0 706 320 58 28 chr10 26050441 26050800 -114265965 - L3 LINE CR1 -62 1515 1146 2093 139 0 0 chr10 26052340 26052634 -114264131 + AluSq SINE Alu 1 294 -19 1048 163 6 0 chr10 26052637 26052803 -114263962 + AluSg/x SINE Alu 126 292 -18 518 283 134 10 chr10 26052933 26053223 -114263542 - HAL1b LINE L1 -586 762 437 2013 146 3 0 chr10 26053435 26053736 -114263029 + AluSx SINE Alu 1 302 -10 2291 103 3 0 chr10 26054435 26054735 -114262030 + AluSp SINE Alu 1 301 -12 1977 125 48 0 chr10 26054742 26055031 -114261734 + AluSx SINE Alu 1 303 -9 2545 74 0 3 chr10 26055650 26055961 -114260804 + AluY SINE Alu 1 310 -1 347 262 24 16 chr10 26055961 26056087 -114260678 + MIR SINE MIR 117 243 -19 21 36 0 0 chr10 26056255 26056283 -114260482 + AT_rich Low_complexity Low_complexity 1 28 0 2315 178 29 43 chr10 26056332 26056559 -114260206 - MER39 LTR ERV1 0 707 478 1829 154 0 35 chr10 26056559 26056870 -114259895 + AluJo SINE Alu 1 300 -12 2315 178 29 43 chr10 26056870 26057149 -114259616 - MER39 LTR ERV1 -229 478 5 1660 174 52 0 chr10 26057738 26058025 -114258740 + AluJb SINE Alu 1 302 -10 1164 96 128 41 chr10 26058206 26058425 -114258340 + L1MA1 LINE L1 6065 6302 0 737 249 70 91 chr10 26058544 26058586 -114258179 - MER39 LTR ERV1 -65 584 543 2002 130 35 0 chr10 26058586 26058870 -114257895 - AluSx SINE Alu -18 294 1 737 249 70 91 chr10 26058870 26059304 -114257461 - MER39 LTR ERV1 -106 543 1 1663 192 7 17 chr10 26059604 26059906 -114256859 - AluJo SINE Alu -11 301 3 820 137 0 46 chr10 26059920 26060051 -114256714 - FLAM_C SINE Alu -8 125 1 405 0 0 0 chr10 26060628 26060673 -114256092 + (CA)n Simple_repeat Simple_repeat 2 46 0 2187 127 3 0 chr10 26060732 26061032 -114255733 + AluSx SINE Alu 1 301 -11 1048 163 6 0 chr10 26061237 26061403 -114255362 - AluSg/x SINE Alu -18 294 128 2093 139 0 0 chr10 26061406 26061700 -114255065 - AluSq SINE Alu -19 294 1 706 320 58 28 chr10 26063240 26063599 -114253166 + L3 LINE CR1 1146 1515 -62 210 233 14 27 chr10 26063766 26063839 -114252926 + GA-rich Low_complexity Low_complexity 1 72 0 2435 188 58 0 chr10 26063905 26064336 -114252429 - MSTB2 LTR MaLR 0 457 2 306 0 0 0 chr10 26064740 26064774 -114251991 + (TG)n Simple_repeat Simple_repeat 1 34 0 1115 130 35 30 chr10 26064774 26064974 -114251791 - AluSg/x SINE Alu -33 277 77 180 77 0 0 chr10 26065087 26065113 -114251652 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 500 229 0 0 chr10 26065114 26065219 -114251546 - FLAM_A SINE Alu -37 105 1 1407 161 6 114 chr10 26065300 26065641 -114251124 - AluJb SINE Alu -8 304 1 359 257 133 40 chr10 26065834 26066060 -114250705 + LTR33 LTR ERVL 271 517 -4 1779 148 7 24 chr10 26066580 26066870 -114249895 + AluJo SINE Alu 1 285 -27 324 0 0 0 chr10 26066870 26066906 -114249859 + (CA)n Simple_repeat Simple_repeat 2 37 0 327 192 90 0 chr10 26066919 26066997 -114249768 + MER53 DNA DNA 105 189 0 368 217 0 0 chr10 26067664 26067733 -114249032 - L2 LINE L2 0 3313 3245 762 171 0 0 chr10 26069272 26069395 -114247370 + AluJ SINE Alu 11 133 -179 309 314 11 59 chr10 26069476 26069747 -114247018 + MLT1J LTR MaLR 3 260 -251 1472 139 0 0 chr10 26070401 26070610 -114246155 + AluSg/x SINE Alu 92 300 -10 747 185 6 67 chr10 26070635 26070813 -114245952 + AluJ SINE Alu 118 284 -28 771 267 19 77 chr10 26071689 26071736 -114245029 - MLT1A1 LTR MaLR -2 363 315 2245 110 7 0 chr10 26071736 26072044 -114244721 - AluSx SINE Alu -2 310 1 771 267 19 77 chr10 26072044 26072359 -114244406 - MLT1A1 LTR MaLR -50 315 22 1775 121 0 27 chr10 26073159 26073457 -114243308 - AluSx SINE Alu -22 290 1 265 284 8 30 chr10 26073769 26073903 -114242862 + CT-rich Low_complexity Low_complexity 4 134 0 382 214 12 0 chr10 26074320 26074404 -114242361 + L1MB1 LINE L1 6060 6144 -24 225 0 0 0 chr10 26074404 26074429 -114242336 + (TG)n Simple_repeat Simple_repeat 2 26 0 787 223 29 6 chr10 26074615 26074790 -114241975 - MIR SINE MIR -61 201 23 26 64 0 0 chr10 26075657 26075704 -114241061 + AT_rich Low_complexity Low_complexity 1 47 0 1525 274 29 35 chr10 26075828 26076339 -114240426 + MLT1E3 LTR MaLR 26 533 -91 249 258 117 62 chr10 26076954 26077082 -114239683 + L1MC/D LINE L1 5620 5754 -2054 1315 216 3 30 chr10 26077445 26077746 -114239019 + AluJo SINE Alu 1 293 -19 1404 126 0 23 chr10 26078291 26078506 -114238259 - AluSx SINE Alu -102 210 1 277 219 16 16 chr10 26078758 26078822 -114237943 - MER20B DNA MER1_type -696 87 24 188 325 136 26 chr10 26081991 26082145 -114234620 - L2 LINE L2 -993 2321 2151 680 264 72 48 chr10 26082390 26082432 -114234333 + MIR SINE MIR 1 41 -221 809 208 141 14 chr10 26082432 26082716 -114234049 + MER33 DNA MER1_type 5 324 0 680 264 72 48 chr10 26082716 26082923 -114233842 + MIR SINE MIR 41 256 -6 2398 78 0 0 chr10 26082924 26083231 -114233534 - AluSx SINE Alu -1 311 5 856 166 43 11 chr10 26086034 26086221 -114230544 + MER63 DNA MER1_type 12 204 -857 1548 199 3 13 chr10 26086954 26087256 -114229509 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 26087270 26087401 -114229364 - FLAM_C SINE Alu -8 125 1 966 84 15 0 chr10 26087822 26087953 -114228812 - AluSq/x SINE Alu -180 133 1 354 98 0 0 chr10 26089301 26089352 -114227413 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1917 121 4 0 chr10 26089357 26089630 -114227135 - AluSg SINE Alu -36 274 1 408 127 25 14 chr10 26090205 26090291 -114226474 + AluS SINE Alu 1 60 -243 431 187 36 92 chr10 26090583 26090834 -114225931 + AluSg1 SINE Alu 5 241 -68 233 384 53 8 chr10 26090858 26090991 -114225774 - L2 LINE L2 -12 3260 3122 1592 176 0 40 chr10 26091199 26091522 -114225243 + AluJo SINE Alu 1 310 -2 670 128 0 20 chr10 26091681 26091783 -114224982 - MSTC LTR MaLR -327 101 2 695 209 0 53 chr10 26092514 26092701 -114224064 + FRAM SINE Alu 1 176 0 369 290 97 39 chr10 26092770 26092977 -114223788 + Charlie8 DNA MER1_type 103 321 -2096 1968 131 3 19 chr10 26093304 26093617 -114223148 + AluSx SINE Alu 1 308 -4 876 191 30 61 chr10 26093626 26093857 -114222908 + AluJb SINE Alu 85 308 -4 312 27 0 0 chr10 26095043 26095080 -114221685 + (TG)n Simple_repeat Simple_repeat 1 37 0 1878 85 25 2 chr10 26096803 26097079 -114219686 - L1PA8 LINE L1 -183 5989 5709 1571 160 16 26 chr10 26098405 26098712 -114218053 + AluJo SINE Alu 1 304 -8 361 330 0 0 chr10 26098718 26098821 -114217944 - MER5A DNA MER1_type -83 106 4 208 326 93 12 chr10 26100677 26100763 -114216002 + MIR SINE MIR 52 144 -64 1328 169 8 16 chr10 26101037 26101279 -114215486 + THE1A LTR MaLR 1 240 -115 2218 117 0 3 chr10 26102104 26102413 -114214352 - AluSx SINE Alu -3 309 2 214 234 0 31 chr10 26102537 26102601 -114214164 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1440 133 0 0 chr10 26103160 26103370 -114213395 - MSTC LTR MaLR -218 210 1 504 293 128 65 chr10 26103439 26103962 -114212803 - L1M4 LINE L1 -3250 2896 2341 1498 123 8 41 chr10 26103998 26104242 -114212523 + MER46A DNA MER2_type 1 236 0 1523 108 23 0 chr10 26104281 26104495 -114212270 + AluSx SINE Alu 1 219 -93 356 170 0 0 chr10 26104596 26104649 -114212116 - AluS SINE Alu -231 68 16 283 252 27 88 chr10 26104657 26104804 -114211961 - MIR SINE MIR -107 155 18 807 208 0 40 chr10 26105017 26105190 -114211575 + FRAM SINE Alu 8 173 -3 1808 139 17 7 chr10 26105649 26105943 -114210822 - AluSx SINE Alu -15 297 1 667 283 84 32 chr10 26108227 26108585 -114208180 - L2 LINE L2 0 3313 2898 286 164 91 0 chr10 26108920 26108975 -114207790 - AluJo SINE Alu -153 149 90 521 308 24 14 chr10 26108978 26109186 -114207579 + L2 LINE L2 2504 2713 -601 1137 138 94 0 chr10 26109199 26109230 -114207535 + AluJo SINE Alu 89 116 -196 582 28 0 0 chr10 26109230 26109302 -114207463 + (CAATA)n Simple_repeat Simple_repeat 2 73 0 1137 138 94 0 chr10 26109302 26109473 -114207292 + AluJo SINE Alu 116 310 -2 657 260 60 97 chr10 26109481 26109768 -114206997 + L2 LINE L2 2739 3105 -208 911 138 26 62 chr10 26109768 26109963 -114206802 - MER53 DNA DNA 0 189 2 657 260 60 97 chr10 26109963 26110165 -114206600 + L2 LINE L2 3105 3313 0 219 244 35 116 chr10 26110174 26110260 -114206505 - L3 LINE CR1 -136 1441 1363 916 127 58 5 chr10 26111797 26112002 -114204763 - AluY SINE Alu -95 216 1 1624 177 10 10 chr10 26112002 26112307 -114204458 - AluJo SINE Alu -6 306 2 1191 164 5 14 chr10 26113002 26113209 -114203556 + AluJo SINE Alu 3 207 -105 675 76 54 0 chr10 26113635 26113727 -114203038 - MER41A LTR ERV1 -4 550 454 971 129 5 86 chr10 26113729 26113915 -114202850 - AluSg/x SINE Alu 0 310 140 2174 117 0 0 chr10 26114117 26114424 -114202341 - AluY SINE Alu -3 308 2 1912 96 0 74 chr10 26114425 26114748 -114202017 - AluSq SINE Alu -14 299 1 516 195 65 0 chr10 26115196 26115319 -114201446 + MER94 DNA DNA 1 131 -3 22 56 0 0 chr10 26115431 26115467 -114201298 + AT_rich Low_complexity Low_complexity 1 36 0 180 328 17 59 chr10 26116349 26116468 -114200297 - MIR3 SINE MIR -1 207 94 2320 63 0 7 chr10 26116990 26117291 -114199474 - AluY SINE Alu -12 299 1 1787 133 10 20 chr10 26117613 26117914 -114198851 - AluJo SINE Alu -10 302 5 195 69 0 0 chr10 26118816 26118845 -114197920 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1839 107 0 49 chr10 26120299 26120626 -114196139 + AluY SINE Alu 1 311 0 423 160 0 0 chr10 26121173 26121248 -114195517 + (TG)n Simple_repeat Simple_repeat 2 76 0 704 202 0 0 chr10 26121559 26121678 -114195087 - FLAM_A SINE Alu -10 123 5 300 240 156 10 chr10 26121773 26121869 -114194896 - MER81 DNA DNA 0 114 5 2051 145 0 0 chr10 26122223 26122519 -114194246 + AluSx SINE Alu 1 296 -16 698 157 0 0 chr10 26124147 26124255 -114192510 + FLAM_C SINE Alu 2 109 -34 3391 65 11 11 chr10 26125356 26125802 -114190963 - MER41A LTR ERV1 -108 446 1 856 156 0 120 chr10 26126247 26126439 -114190326 - AluJb SINE Alu -8 304 136 1737 119 95 41 chr10 26126864 26127159 -114189606 - AluSx SINE Alu -1 311 1 1015 179 0 22 chr10 26127434 26127618 -114189147 + AluJb SINE Alu 133 312 0 340 254 40 48 chr10 26127957 26128083 -114188682 - MIR3 SINE MIR -52 156 32 2264 107 0 3 chr10 26128526 26128824 -114187941 - AluSx SINE Alu -15 297 1 207 0 0 0 chr10 26129716 26129739 -114187026 + (A)n Simple_repeat Simple_repeat 1 23 0 254 338 106 7 chr10 26131268 26131419 -114185346 - MIR3 SINE MIR -3 205 40 944 201 0 0 chr10 26131701 26131850 -114184915 + AluJb SINE Alu 134 282 -30 224 211 0 0 chr10 26131962 26132014 -114184751 + (CA)n Simple_repeat Simple_repeat 1 52 0 2693 36 0 3 chr10 26132253 26132562 -114184203 - AluY SINE Alu -3 308 1 1405 224 0 14 chr10 26133009 26133295 -114183470 + AluJo SINE Alu 12 293 -19 1684 170 31 14 chr10 26134136 26134430 -114182335 + AluJo SINE Alu 1 299 -13 2080 137 7 0 chr10 26134884 26135183 -114181582 + AluSx SINE Alu 1 301 -11 2367 83 7 0 chr10 26136014 26136314 -114180451 + AluY SINE Alu 1 302 -9 1262 168 9 23 chr10 26136419 26136639 -114180126 + AluSg/x SINE Alu 87 303 -7 2245 100 0 7 chr10 26137527 26137827 -114178938 - AluSx SINE Alu -14 298 1 201 182 0 0 chr10 26138152 26138185 -114178580 + A-rich Low_complexity Low_complexity 1 33 0 687 112 0 0 chr10 26138440 26138547 -114178218 + (TC)n Simple_repeat Simple_repeat 2 108 0 1520 154 3 68 chr10 26138548 26138841 -114177924 - AluJo SINE Alu -38 274 1 216 353 60 17 chr10 26139362 26139478 -114177287 - L2 LINE L2 -32 3281 3161 2366 104 0 0 chr10 26139778 26140076 -114176689 - AluSx SINE Alu -14 298 1 252 231 0 0 chr10 26140158 26140210 -114176555 + LTR30 LTR ERV1 1 52 -670 1001 191 40 56 chr10 26140210 26140514 -114176251 + LTR12 LTR ERV1 53 2032 -406 364 149 15 0 chr10 26140514 26140581 -114176184 + LTR30 LTR ERV1 551 618 -104 590 129 58 79 chr10 26140581 26140720 -114176045 + LTR12 LTR ERV1 352 487 -227 717 171 0 16 chr10 26141195 26141318 -114175447 - FLAM_C SINE Alu -21 122 2 7490 21 0 0 chr10 26142072 26142918 -114173847 + L1PA2 LINE L1 5297 6142 -13 1651 183 3 7 chr10 26142948 26143243 -114173522 + AluJo SINE Alu 1 294 -18 1970 161 0 0 chr10 26143931 26144235 -114172530 - AluJo SINE Alu -8 304 1 186 43 0 0 chr10 26145893 26145916 -114170849 + (CA)n Simple_repeat Simple_repeat 1 23 0 372 22 0 0 chr10 26146957 26147002 -114169763 + (TG)n Simple_repeat Simple_repeat 2 46 0 347 299 82 8 chr10 26147843 26147977 -114168788 + MIR SINE MIR 48 191 -71 1801 127 38 31 chr10 26148139 26148430 -114168335 - AluJb SINE Alu -19 293 1 224 175 0 0 chr10 26148443 26148483 -114168282 - MIR SINE MIR -114 148 109 24 0 0 0 chr10 26148651 26148675 -114168090 + AT_rich Low_complexity Low_complexity 1 24 0 5369 116 51 4 chr10 26149404 26150402 -114166363 - L1PA16 LINE L1 -1 6165 5111 1924 169 19 16 chr10 26150551 26150923 -114165842 - L1PB4 LINE L1 -3 6153 5781 238 271 13 0 chr10 26150927 26151078 -114165687 + (TA)n Simple_repeat Simple_repeat 1 153 0 2059 148 3 0 chr10 26151837 26152148 -114164617 - AluSx SINE Alu 0 312 1 1521 214 3 23 chr10 26152922 26153221 -114163544 - AluJb SINE Alu -19 293 1 245 258 117 62 chr10 26153584 26153712 -114163053 - L1MC/D LINE L1 -2054 5754 5620 1793 167 17 0 chr10 26154020 26154307 -114162458 + AluSx SINE Alu 2 293 -19 183 80 0 0 chr10 26154398 26154423 -114162342 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 842 64 0 0 chr10 26154446 26154556 -114162209 - L1PA13 LINE L1 -3 6160 6051 813 121 0 57 chr10 26154573 26154713 -114162052 - FLAM_C SINE Alu -11 132 1 2304 84 0 17 chr10 26154798 26155096 -114161669 + AluY SINE Alu 1 293 -18 2587 68 3 0 chr10 26155672 26155981 -114160784 + AluSq SINE Alu 1 310 -3 372 96 5 35 chr10 26157723 26157789 -114158976 - Alu SINE Alu -9 293 240 24 32 0 0 chr10 26158194 26158225 -114158540 + AT_rich Low_complexity Low_complexity 1 31 0 1196 201 3 81 chr10 26158665 26158774 -114157991 + AluJo SINE Alu 29 145 -167 2147 111 3 3 chr10 26158774 26159063 -114157702 + AluSx SINE Alu 1 289 -23 1196 201 3 81 chr10 26159063 26159261 -114157504 + AluJo SINE Alu 145 312 0 372 290 97 39 chr10 26159330 26159537 -114157228 + Charlie8 DNA MER1_type 103 321 -2096 249 301 68 110 chr10 26159594 26159813 -114156952 + MIR SINE MIR 34 243 -19 1560 191 7 7 chr10 26160131 26160419 -114156346 + AluJo SINE Alu 6 293 -19 183 80 0 0 chr10 26160484 26160509 -114156256 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 230 358 0 18 chr10 26160533 26160642 -114156123 - L2 LINE L2 -43 3229 3123 832 107 0 107 chr10 26160690 26160839 -114155926 + FLAM_C SINE Alu 1 133 0 444 147 0 0 chr10 26161475 26161550 -114155215 + (TG)n Simple_repeat Simple_repeat 2 76 0 555 129 73 8 chr10 26161710 26161834 -114154931 + L1MC3 LINE L1 5267 5398 -2387 * 5392 188 59 75 chr10 26161824 26163760 -114153005 + L1PA16 LINE L1 4212 6177 11 2135 137 0 10 chr10 26163760 26164073 -114152692 + AluSg SINE Alu 1 310 0 5392 188 59 75 chr10 26164073 26164274 -114152491 + L1PA16 LINE L1 6177 6380 214 1909 162 7 7 chr10 26164274 26164582 -114152183 - AluSx SINE Alu -4 308 1 5392 188 59 75 chr10 26164582 26164835 -114151930 + L1PA16 LINE L1 6380 6636 470 2397 99 3 0 chr10 26164835 26165147 -114151618 + AluSp SINE Alu 1 313 0 5392 188 59 75 chr10 26165147 26165761 -114151004 + L1PA16 LINE L1 6636 7258 1092 760 167 17 0 chr10 26165761 26165881 -114150884 - FLAM_C SINE Alu -20 123 2 5392 188 59 75 chr10 26165881 26165895 -114150870 + L1PA16 LINE L1 7258 5936 -230 2299 88 10 0 chr10 26165895 26166189 -114150576 - AluY SINE Alu -14 297 1 5392 188 59 75 chr10 26166189 26166417 -114150348 + L1PA16 LINE L1 5935 6165 -1 1044 194 4 66 chr10 26166426 26166668 -114150097 + L1MC3 LINE L1 6201 6427 -1358 1000 169 39 10 chr10 26166681 26166888 -114149877 + L1MC3 LINE L1 7570 7782 -3 2423 82 3 0 chr10 26167134 26167438 -114149327 - AluY SINE Alu -6 305 1 2165 122 0 3 chr10 26167783 26168079 -114148686 + AluSq SINE Alu 1 295 -18 1958 118 0 83 chr10 26169569 26169907 -114146858 - AluSx SINE Alu -2 310 1 2378 69 16 0 chr10 26170448 26170754 -114146011 + AluY SINE Alu 1 311 0 321 330 0 0 chr10 26172527 26172630 -114144135 + MER5A DNA MER1_type 4 106 -83 1730 159 13 26 chr10 26172636 26172944 -114143821 - AluJo SINE Alu -8 304 1 1844 132 34 20 chr10 26174113 26174408 -114142357 - AluSq SINE Alu -14 299 1 1923 148 0 7 chr10 26175035 26175326 -114141439 + AluJb SINE Alu 6 294 -18 247 337 27 60 chr10 26175821 26176005 -114140760 + MIR3 SINE MIR 16 193 -15 4086 196 42 50 chr10 26176676 26177229 -114139536 - L1MD2 LINE L1 -197 6145 5589 2296 114 0 0 chr10 26177229 26177536 -114139229 - AluSg SINE Alu -3 307 1 4086 196 42 50 chr10 26177536 26177567 -114139198 - L1MD2 LINE L1 -753 5589 5559 1711 162 7 16 chr10 26177567 26177870 -114138895 + AluJb SINE Alu 5 304 -8 4086 196 42 50 chr10 26177870 26178284 -114138481 - L1MD2 LINE L1 -783 5559 5153 2189 116 0 0 chr10 26178284 26178576 -114138189 + AluSq SINE Alu 1 292 -21 4086 196 42 50 chr10 26178576 26178871 -114137894 - L1MD2 LINE L1 -1189 5153 4857 753 99 40 0 chr10 26178871 26178972 -114137793 - AluSq/x SINE Alu -206 107 3 540 161 21 0 chr10 26178986 26179079 -114137686 + L1M4 LINE L1 5189 5283 -863 3628 230 67 29 chr10 26179082 26179284 -114137481 - L1MD2 LINE L1 -1280 4849 4656 2491 70 0 10 chr10 26179284 26179598 -114137167 - AluY SINE Alu 0 311 1 3628 230 67 29 chr10 26179598 26180493 -114136272 - L1MD2 LINE L1 -1473 4656 3711 490 280 87 32 chr10 26180487 26180618 -114136147 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 26180618 26180638 -114136127 + (TA)n Simple_repeat Simple_repeat 2 21 0 490 280 87 32 chr10 26180638 26180823 -114135942 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 26180823 26180864 -114135901 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 280 87 32 chr10 26180864 26181124 -114135641 - L1MD2 LINE L1 -1148 1342 984 809 227 91 12 chr10 26181295 26181537 -114135228 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 26181945 26181978 -114134787 + AT_rich Low_complexity Low_complexity 1 33 0 217 302 0 0 chr10 26182624 26182687 -114134078 - MIR SINE MIR -13 249 187 2542 152 25 23 chr10 26182702 26182751 -114134014 + Tigger2a DNA MER2_type 1 48 -2660 3595 202 79 4 chr10 26182751 26183434 -114133331 + MER50 LTR ERV1 1 734 0 2542 152 25 23 chr10 26183434 26183817 -114132948 + Tigger2a DNA MER2_type 48 434 0 219 216 307 0 chr10 26183818 26183906 -114132859 - MIR SINE MIR -90 172 58 245 309 0 15 chr10 26184263 26184331 -114132434 + MIR SINE MIR 4 70 -192 198 300 20 0 chr10 26184342 26184392 -114132373 + MIR SINE MIR 211 261 -1 2010 104 82 4 chr10 26184435 26184714 -114132051 + AluSg SINE Alu 1 301 -9 1208 246 104 26 chr10 26184786 26185426 -114131339 + L2 LINE L2 2527 3231 -82 2063 103 0 0 chr10 26185576 26185849 -114130916 - AluSx SINE Alu -39 273 1 1282 178 38 48 chr10 26185930 26186222 -114130543 + AluJo SINE Alu 1 289 -23 784 190 110 0 chr10 26186847 26187010 -114129755 + MER5A DNA MER1_type 9 189 0 1891 179 81 27 chr10 26188003 26188372 -114128393 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 26188948 26188969 -114127796 + AT_rich Low_complexity Low_complexity 1 21 0 2287 125 3 0 chr10 26190259 26190570 -114126195 + AluSq SINE Alu 1 312 -1 217 274 0 0 chr10 26191303 26191354 -114125411 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 26191372 26191452 -114125313 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 198 71 0 0 chr10 26192064 26192092 -114124673 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1409 64 0 6 chr10 26192341 26192514 -114124251 - L1PA5 LINE L1 -1 6153 5982 13974 52 6 2 chr10 26192614 26194961 -114121804 - L1PA5 LINE L1 -143 6011 3658 1703 167 7 24 chr10 26195156 26195471 -114121294 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 26195729 26195830 -114120935 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 26196267 26196337 -114120428 + L3b LINE CR1 1296 1365 -218 525 248 8 0 chr10 26197083 26197200 -114119565 - MER96B DNA MER1_type? -2 415 298 2015 82 4 11 chr10 26197203 26197472 -114119293 + AluY SINE Alu 5 271 -40 313 139 7 7 chr10 26197625 26197713 -114119052 - L1ME LINE L1 -366 5785 5695 204 289 122 0 chr10 26197715 26197805 -114118960 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 26198925 26198955 -114117810 + (TG)n Simple_repeat Simple_repeat 2 31 0 2304 289 137 25 chr10 26199654 26200525 -114116240 + L2 LINE L2 1715 2487 -826 2086 102 51 0 chr10 26200525 26200800 -114115965 - AluSx SINE Alu -23 289 1 2304 289 137 25 chr10 26200800 26201361 -114115404 + L2 LINE L2 2487 3312 -1 2281 122 0 0 chr10 26202439 26202743 -114114022 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 26203821 26204216 -114112549 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 26205276 26205588 -114111177 - AluJo SINE Alu -12 300 1 2189 102 26 10 chr10 26206224 26206528 -114110237 + AluSx SINE Alu 2 310 -2 588 220 75 31 chr10 26206806 26206965 -114109800 + MIR SINE MIR 92 257 -5 471 296 11 21 chr10 26207131 26207320 -114109445 - L1ME3A LINE L1 -206 5964 5778 666 290 101 38 chr10 26207457 26208295 -114108470 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 26208317 26208344 -114108421 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 26208346 26208633 -114108132 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 26208700 26209216 -114107549 - L1ME3A LINE L1 -1830 4316 3730 2908 90 6 11 chr10 26209247 26209613 -114107152 - THE1B LTR MaLR 0 364 1 296 68 0 0 chr10 26210231 26210275 -114106490 - AluY SINE Alu 0 301 258 1786 109 0 49 chr10 26210375 26210642 -114106123 - AluY SINE Alu -57 254 1 1864 157 28 0 chr10 26210715 26210877 -114105888 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 26210877 26211137 -114105628 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 26211137 26211261 -114105504 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 26211493 26211514 -114105251 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 26211841 26211948 -114104817 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 26212021 26212326 -114104439 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 26212732 26212895 -114103870 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 26212939 26213387 -114103378 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 26213766 26214060 -114102705 + AluSx SINE Alu 1 292 -20 941 242 62 0 chr10 26214484 26214711 -114102054 + MIR SINE MIR 14 254 -8 989 283 114 37 chr10 26214775 26215485 -114101280 + L2 LINE L2 2522 3313 0 1232 216 42 19 chr10 26215738 26216048 -114100717 + L1ME1 LINE L1 5818 6134 -32 2476 113 21 16 chr10 26216054 26216433 -114100332 - L1PB1 LINE L1 -1 6150 5770 1742 147 3 11 chr10 26216470 26216755 -114100010 - AluSx SINE Alu -29 283 1 2183 117 0 3 chr10 26217564 26217862 -114098903 + AluSx SINE Alu 1 297 -15 442 139 236 0 chr10 26218219 26218291 -114098474 + AluS SINE Alu 2 90 -222 544 218 20 0 chr10 26218292 26218393 -114098372 - AluJo SINE Alu -125 187 85 1251 223 108 47 chr10 26218553 26218894 -114097871 + MER82 DNA MER2_type 1 362 -291 1174 134 5 37 chr10 26218957 26219144 -114097621 - AluJo SINE Alu -36 276 96 614 131 50 30 chr10 26219178 26219277 -114097488 - AluJo SINE Alu -211 101 1 1134 271 11 4 chr10 26219341 26219614 -114097151 + MER82 DNA MER2_type 379 653 0 500 136 0 12 chr10 26219691 26219772 -114096993 - MADE1 DNA Mariner 0 80 1 1418 181 3 59 chr10 26220452 26220604 -114096161 - AluJo SINE Alu -25 287 159 2249 124 0 0 chr10 26220604 26220903 -114095862 - AluSg SINE Alu -11 299 1 1418 181 3 59 chr10 26220903 26221054 -114095711 - AluJo SINE Alu -153 159 1 2865 93 8 16 chr10 26221454 26221832 -114094933 + THE1C LTR MaLR 1 375 0 349 303 30 8 chr10 26222219 26222351 -114094414 + L3 LINE CR1 1248 1382 -195 288 328 146 5 chr10 26222339 26222531 -114094234 + MIR SINE MIR 23 241 -21 * 209 307 45 34 chr10 26222563 26222651 -114094114 - L2 LINE L2 0 3313 3225 1986 119 59 0 chr10 26222850 26223136 -114093629 - AluSx SINE Alu -9 303 1 200 226 12 36 chr10 26223202 26223286 -114093479 + T-rich Low_complexity Low_complexity 2 83 0 305 263 0 0 chr10 26224138 26224218 -114092547 - MER116 DNA Mariner 0 80 1 2419 85 3 0 chr10 26224526 26224831 -114091934 + AluY SINE Alu 1 306 -5 1000 169 39 10 chr10 26225077 26225284 -114091481 - L1MC3 LINE L1 -3 7782 7570 1044 194 4 66 chr10 26225297 26225539 -114091226 - L1MC3 LINE L1 -1358 6427 6201 5411 188 58 76 chr10 26225548 26225776 -114090989 - L1PA16 LINE L1 -1 6165 5935 2327 85 10 0 chr10 26225776 26226070 -114090695 + AluY SINE Alu 1 297 -14 5411 188 58 76 chr10 26226070 26226084 -114090681 - L1PA16 LINE L1 -231 5935 5922 760 167 17 0 chr10 26226084 26226204 -114090561 + FLAM_C SINE Alu 2 123 -20 5411 188 58 76 chr10 26226204 26226819 -114089946 - L1PA16 LINE L1 -244 5922 5298 2428 96 3 0 chr10 26226819 26227131 -114089634 - AluSp SINE Alu 0 313 1 5411 188 58 76 chr10 26227131 26227384 -114089381 - L1PA16 LINE L1 -868 5298 5042 1916 162 7 7 chr10 26227384 26227692 -114089073 + AluSx SINE Alu 1 308 -4 5411 188 58 76 chr10 26227692 26227893 -114088872 - L1PA16 LINE L1 -1124 5042 4839 2177 131 0 10 chr10 26227893 26228206 -114088559 - AluSg SINE Alu 0 310 1 5411 188 58 76 chr10 26228206 26230148 -114086617 - L1PA16 LINE L1 -1327 4839 4212 555 129 73 8 chr10 26230138 26230262 -114086503 - L1MC3 LINE L1 -2387 5398 5267 * 423 160 0 0 chr10 26230422 26230497 -114086268 + (CA)n Simple_repeat Simple_repeat 2 76 0 2197 92 3 7 chr10 26231041 26231349 -114085416 - AluSx SINE Alu 0 307 1 31 44 0 0 chr10 26233095 26233140 -114083625 + AT_rich Low_complexity Low_complexity 1 45 0 180 152 0 0 chr10 26233424 26233457 -114083308 + GA-rich Low_complexity Low_complexity 3 35 0 189 0 0 0 chr10 26233520 26233541 -114083224 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2275 95 7 0 chr10 26234606 26234900 -114081865 - AluSx SINE Alu -16 296 1 2165 122 0 3 chr10 26235245 26235541 -114081224 + AluSq SINE Alu 1 295 -18 1981 115 0 83 chr10 26237031 26237369 -114079396 - AluSx SINE Alu -2 310 1 2462 49 16 0 chr10 26237909 26238213 -114078552 + AluY SINE Alu 1 309 -2 384 296 82 13 chr10 26239990 26240099 -114076666 + MER5A DNA MER1_type 4 129 -60 1730 159 13 26 chr10 26240099 26240407 -114076358 - AluJo SINE Alu -8 304 1 384 296 82 13 chr10 26240407 26240456 -114076309 + MER5A DNA MER1_type 129 173 -16 292 203 16 16 chr10 26241152 26241216 -114075549 + MER20B DNA MER1_type 24 87 -696 2147 121 0 34 chr10 26241468 26241790 -114074975 + AluSx SINE Alu 1 311 -1 842 226 196 1 chr10 26241906 26242422 -114074343 + MER20B DNA MER1_type 109 783 0 2195 141 0 0 chr10 26242515 26242827 -114073938 + AluSx SINE Alu 1 312 0 1637 169 50 7 chr10 26243411 26243690 -114073075 - AluJo SINE Alu -12 300 10 1729 133 4 4 chr10 26244567 26244815 -114071950 - AluSx SINE Alu -12 300 53 2133 121 0 3 chr10 26244815 26245112 -114071653 - AluSx SINE Alu -16 296 1 2300 102 0 0 chr10 26245762 26246057 -114070708 + AluSx SINE Alu 1 295 -17 2300 137 63 18 chr10 26246057 26246437 -114070328 - LTR32 LTR ERVL -63 408 12 444 266 171 46 chr10 26246521 26246848 -114069917 - L2 LINE L2 -2 3311 2944 751 261 138 68 chr10 26246943 26247017 -114069748 - L2 LINE L2 -499 2815 2748 1976 151 0 7 chr10 26247017 26247315 -114069450 - AluJo SINE Alu -16 296 1 751 261 138 68 chr10 26247315 26247712 -114069053 - L2 LINE L2 -566 2748 2311 34 42 0 0 chr10 26248328 26248376 -114068389 + AT_rich Low_complexity Low_complexity 1 48 0 1207 202 109 8 chr10 26248376 26248633 -114068132 - AluJo SINE Alu -29 283 1 206 317 203 12 chr10 26248750 26249075 -114067690 - L2 LINE L2 -338 2976 2590 1450 215 63 6 chr10 26249197 26249666 -114067099 - MER87 LTR ERV1 0 541 21 212 308 146 23 chr10 26249698 26249958 -114066807 - L2 LINE L2 -882 2432 2141 1819 171 3 31 chr10 26251493 26251814 -114064951 + AluJb SINE Alu 1 312 0 2097 131 7 0 chr10 26252840 26253137 -114063628 + AluSx SINE Alu 1 299 -13 348 127 0 0 chr10 26253137 26253192 -114063573 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 282 116 0 0 chr10 26253336 26253379 -114063386 + (CA)n Simple_repeat Simple_repeat 1 43 0 428 261 29 14 chr10 26253397 26253535 -114063230 - MER103 DNA DNA -25 141 2 334 258 107 13 chr10 26253619 26253778 -114062987 + MIR SINE MIR 32 205 -57 586 266 59 0 chr10 26254217 26254386 -114062379 - MIR SINE MIR -7 255 77 1893 152 0 3 chr10 26254714 26255020 -114061745 + AluJb SINE Alu 1 305 0 22 0 0 0 chr10 26256305 26256327 -114060438 + AT_rich Low_complexity Low_complexity 1 22 0 2215 109 3 10 chr10 26256333 26256635 -114060130 + AluSx SINE Alu 1 300 -12 1722 176 7 3 chr10 26256638 26256927 -114059838 + AluJb SINE Alu 5 294 -18 1737 92 26 0 chr10 26257843 26258070 -114058695 - AluSg/x SINE Alu -10 302 70 2326 78 7 10 chr10 26258659 26258965 -114057800 + AluY SINE Alu 1 305 -6 931 176 0 34 chr10 26259599 26259775 -114056990 + AluJb SINE Alu 137 306 -6 493 222 20 0 chr10 26260318 26260417 -114056348 + MER81 DNA DNA 13 113 -1 732 204 0 0 chr10 26261281 26261413 -114055352 - FLAM_A SINE Alu -1 132 1 803 149 25 19 chr10 26261732 26261893 -114054872 - MER119 DNA MER1_type -54 529 368 623 195 0 16 chr10 26261894 26262022 -114054743 + MLT2D LTR ERVL 2 127 -287 770 145 8 0 chr10 26262022 26262139 -114054626 + FLAM_C SINE Alu 3 120 -13 731 126 20 13 chr10 26262143 26262294 -114054471 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 1361 163 8 54 chr10 26262295 26262553 -114054212 + MLT2D LTR ERVL 121 366 -48 1657 195 62 21 chr10 26262632 26262970 -114053795 - MER119 DNA MER1_type -231 352 1 2443 91 7 0 chr10 26263091 26263399 -114053366 + AluSx SINE Alu 1 310 -2 2490 72 0 13 chr10 26264755 26265059 -114051706 + AluY SINE Alu 1 300 -11 2077 152 61 13 chr10 26265069 26265245 -114051520 + L1MB3 LINE L1 5552 5718 -465 1934 135 20 24 chr10 26265245 26265541 -114051224 + AluSx SINE Alu 1 295 -17 2077 152 61 13 chr10 26265541 26265929 -114050836 + L1MB3 LINE L1 5718 6169 -14 1972 135 0 17 chr10 26265933 26266247 -114050518 - AluSx SINE Alu 0 309 1 259 77 0 0 chr10 26266588 26266627 -114050138 + L1MA3 LINE L1 6267 6305 0 1176 194 17 69 chr10 26266922 26267210 -114049555 - AluJo SINE Alu 0 312 40 360 0 0 0 chr10 26267782 26267822 -114048943 + (TG)n Simple_repeat Simple_repeat 2 41 0 1767 148 11 15 chr10 26267992 26268263 -114048502 + AluJo SINE Alu 19 288 -24 2079 131 0 0 chr10 26268274 26268584 -114048181 + AluSx SINE Alu 1 310 0 501 250 83 31 chr10 26271423 26271478 -114045287 - MIR SINE MIR -45 217 166 1924 126 47 0 chr10 26271478 26271756 -114045009 - AluJo SINE Alu -10 302 12 501 250 83 31 chr10 26271756 26271892 -114044873 - MIR SINE MIR -96 166 16 3218 131 10 12 chr10 26272059 26272548 -114044217 - LOR1a LTR ERV1 -7 490 3 296 158 0 73 chr10 26272971 26273282 -114043483 + (TA)n Simple_repeat Simple_repeat 1 288 0 260 317 49 37 chr10 26273590 26273754 -114043011 + MIR SINE MIR 97 262 0 2406 99 0 0 chr10 26274007 26274310 -114042455 + AluSq SINE Alu 1 303 -10 1841 168 7 0 chr10 26274611 26274903 -114041862 - AluJb SINE Alu -18 294 1 1936 163 3 0 chr10 26274931 26275232 -114041533 - AluJo SINE Alu -10 302 1 2194 105 0 3 chr10 26275789 26276084 -114040681 - AluSq SINE Alu -13 300 7 195 292 100 50 chr10 26276491 26276611 -114040154 + L3 LINE CR1 317 442 -1135 2067 117 0 11 chr10 26277023 26277306 -114039459 - AluSx SINE Alu -24 288 9 684 139 28 0 chr10 26277422 26277530 -114039235 - L1PA16 LINE L1 -9 6157 6047 341 297 132 62 chr10 26277740 26278080 -114038685 + L3b LINE CR1 1102 1465 -118 772 199 8 8 chr10 26278248 26278379 -114038386 + FLAM_A SINE Alu 1 131 -2 602 85 11 0 chr10 26278382 26278476 -114038289 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 243 253 162 40 chr10 26278651 26278750 -114038015 + L2 LINE L2 3160 3270 -2 1551 194 95 14 chr10 26278936 26279282 -114037483 + L1MB8 LINE L1 5657 6030 -148 1229 108 0 6 chr10 26279284 26279450 -114037315 - AluSg/x SINE Alu -15 297 133 432 245 38 0 chr10 26279450 26279574 -114037191 + L1MB7 LINE L1 6021 6149 -25 1620 167 14 21 chr10 26279574 26279907 -114036858 - AluJo SINE Alu 0 333 3 2065 102 3 7 chr10 26279956 26280240 -114036525 + AluSq SINE Alu 1 283 -30 2337 202 26 22 chr10 26280765 26281373 -114035392 + L1M3 LINE L1 4848 5457 -723 252 214 0 0 chr10 26281372 26281414 -114035351 - L1M4 LINE L1 -707 5467 5426 * 2261 110 3 3 chr10 26281595 26281905 -114034860 - AluSg SINE Alu 0 310 1 241 302 54 31 chr10 26282973 26283102 -114033663 + MIR SINE MIR 119 250 -12 348 348 81 5 chr10 26283520 26283741 -114033024 - MIR SINE MIR -14 248 11 2246 125 44 36 chr10 26284160 26284521 -114032244 + THE1B LTR MaLR 1 364 0 420 321 79 42 chr10 26285638 26285828 -114030937 + MIR3 SINE MIR 5 201 -7 25 51 0 0 chr10 26286296 26286335 -114030430 + AT_rich Low_complexity Low_complexity 1 39 0 317 336 64 39 chr10 26286401 26286615 -114030150 - L1MC4a LINE L1 -1766 6042 5818 2360 89 7 0 chr10 26286615 26286918 -114029847 - AluSx SINE Alu -7 305 1 317 336 64 39 chr10 26286918 26286986 -114029779 - L1MC4a LINE L1 -1990 5818 5753 269 266 149 39 chr10 26287064 26287433 -114029332 - L1MC4a LINE L1 -725 5441 5296 282 323 52 47 chr10 26287530 26287954 -114028811 - L1MC4a LINE L1 -979 5167 4742 22 70 0 0 chr10 26288135 26288178 -114028587 + AT_rich Low_complexity Low_complexity 1 43 0 2539 114 22 75 chr10 26289759 26290143 -114026622 - L1MB2 LINE L1 0 6171 5813 2229 64 0 30 chr10 26290143 26290439 -114026326 + AluY SINE Alu 1 287 -24 2539 114 22 75 chr10 26290439 26290509 -114026256 - L1MB2 LINE L1 -358 5813 5741 2106 123 7 3 chr10 26290530 26290832 -114025933 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 26291543 26291564 -114025201 + AT_rich Low_complexity Low_complexity 1 21 0 898 143 7 0 chr10 26291738 26291885 -114024880 - L1MA9 LINE L1 -5 6307 6160 1872 122 68 0 chr10 26292036 26292314 -114024451 + AluSx SINE Alu 1 297 -15 1404 174 80 31 chr10 26292826 26293113 -114023652 + AluJb SINE Alu 1 301 -11 245 239 204 44 chr10 26293365 26293478 -114023287 - MIR SINE MIR -13 249 119 2058 132 3 7 chr10 26294906 26295209 -114021556 - AluSx SINE Alu -10 302 1 195 42 0 0 chr10 26297381 26297405 -114019360 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4124 152 142 14 chr10 26298199 26298931 -114017834 - LTR1B LTR ERV1 0 826 1 1685 203 56 17 chr10 26299249 26299609 -114017156 - MLT1A2 LTR MaLR 0 374 1 2428 91 0 0 chr10 26299698 26300006 -114016759 - AluSg SINE Alu 0 310 3 258 223 17 189 chr10 26300175 26300350 -114016415 - MIR SINE MIR -90 172 28 2059 151 74 26 chr10 26300470 26300848 -114015917 + MSTD LTR MaLR 1 396 0 358 226 137 24 chr10 26300897 26301021 -114015744 - MIR3 SINE MIR -49 159 22 259 210 14 168 chr10 26302738 26302881 -114013884 + MARNA DNA Mariner 440 560 -26 204 125 0 0 chr10 26303003 26303035 -114013730 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2104 143 0 9 chr10 26303037 26303352 -114013413 - AluSx SINE Alu 0 312 1 399 335 71 27 chr10 26303405 26303629 -114013136 - MIR SINE MIR -26 236 3 2159 100 0 4 chr10 26304000 26304280 -114012485 - AluSx SINE Alu -6 306 28 296 253 103 34 chr10 26304943 26305089 -114011676 - L1ME4a LINE L1 -11 6110 5955 1845 167 0 16 chr10 26305129 26305446 -114011319 - AluJb SINE Alu 0 312 1 2386 66 0 25 chr10 26305652 26305971 -114010794 + AluY SINE Alu 1 311 0 308 329 60 7 chr10 26306078 26306227 -114010538 - MIR SINE MIR -8 254 98 603 110 8 31 chr10 26306672 26306918 -114009847 + AluSx SINE Alu 1 310 0 1802 178 0 22 chr10 26307511 26307825 -114008940 - AluJo SINE Alu -5 307 1 2389 90 0 0 chr10 26307934 26308233 -114008532 - AluSq SINE Alu -14 299 1 215 222 0 19 chr10 26308694 26308729 -114008036 + CT-rich Low_complexity Low_complexity 3 38 -17 1503 169 0 55 chr10 26308729 26309055 -114007710 - AluJo SINE Alu 0 312 5 215 222 0 19 chr10 26309055 26309073 -114007692 + CT-rich Low_complexity Low_complexity 38 55 0 183 42 0 0 chr10 26309650 26309674 -114007091 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2149 136 0 0 chr10 26310116 26310426 -114006339 + AluSx SINE Alu 1 310 -2 204 237 0 51 chr10 26311004 26311063 -114005702 + T-rich Low_complexity Low_complexity 4 59 0 1010 176 71 9 chr10 26311672 26311882 -114004883 - MIR SINE MIR -3 259 37 185 333 96 0 chr10 26312876 26312975 -114003790 - MIR SINE MIR -64 144 62 351 0 0 0 chr10 26313133 26313172 -114003593 + (TG)n Simple_repeat Simple_repeat 2 40 0 2589 53 0 0 chr10 26313937 26314239 -114002526 + AluY SINE Alu 1 302 -9 873 172 53 24 chr10 26314551 26314720 -114002045 - AluJb SINE Alu -138 174 1 1787 116 31 41 chr10 26315768 26315946 -114000819 + L1PA16 LINE L1 5867 6042 -124 2252 158 83 25 chr10 26315946 26316382 -114000383 - LOR1b LTR ERV1 0 461 1 1787 116 31 41 chr10 26316382 26316497 -114000268 + L1PA16 LINE L1 6042 6157 -9 1701 173 7 7 chr10 26318621 26318928 -113997837 - AluJo SINE Alu -5 307 1 321 318 117 7 chr10 26320154 26320308 -113996457 - MIR3 SINE MIR -6 202 32 1797 149 22 4 chr10 26320323 26320598 -113996167 + AluJo SINE Alu 1 280 -32 210 37 0 0 chr10 26320598 26320625 -113996140 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2073 146 0 3 chr10 26323611 26323919 -113992846 + AluSq SINE Alu 1 307 -6 1508 151 0 59 chr10 26324186 26324457 -113992308 + AluSx SINE Alu 1 255 -57 360 0 0 0 chr10 26324457 26324497 -113992268 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 2180 156 24 15 chr10 26325197 26325531 -113991234 + MER1B DNA MER1_type 1 337 0 22 70 0 0 chr10 26326292 26326335 -113990430 + AT_rich Low_complexity Low_complexity 1 43 0 192 270 79 16 chr10 26326464 26326527 -113990238 - MIR SINE MIR -108 100 34 1224 156 14 14 chr10 26326678 26326889 -113989876 - AluJb SINE Alu 0 312 102 1302 188 7 33 chr10 26376894 26377166 -113939599 - AluJo SINE Alu -36 276 12 896 169 0 0 chr10 26377725 26377861 -113938904 + MER2 DNA MER2_type 1 136 -209 550 227 74 51 chr10 26377902 26378118 -113938647 + MER2 DNA MER2_type 125 345 0 2128 111 3 0 chr10 26378347 26378636 -113938129 - AluSx SINE Alu -13 299 10 1690 167 10 7 chr10 26379168 26379461 -113937304 + AluJo SINE Alu 6 299 -13 1532 169 52 14 chr10 26379461 26379581 -113937184 + AluJb SINE Alu 1 115 -197 186 43 0 0 chr10 26379581 26379604 -113937161 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1532 169 52 14 chr10 26379604 26379773 -113936992 + AluJb SINE Alu 115 301 -11 521 238 210 5 chr10 26380049 26380263 -113936502 - MIR SINE MIR 0 262 5 2695 108 11 6 chr10 26381015 26381377 -113935388 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 26381402 26381424 -113935341 + AT_rich Low_complexity Low_complexity 1 22 0 2404 101 0 3 chr10 26383150 26383456 -113933309 + AluSq SINE Alu 1 305 -8 193 284 62 12 chr10 26383795 26383876 -113932889 - L2 LINE L2 -359 2913 2829 1984 125 0 7 chr10 26384047 26384360 -113932405 + AluSx SINE Alu 3 313 0 342 175 164 129 chr10 26384360 26384531 -113932234 - MER5B DNA MER1_type -1 177 1 2425 85 0 3 chr10 26385846 26386152 -113930613 + AluSq SINE Alu 1 305 -8 373 160 4 4 chr10 26386575 26386650 -113930115 - Alu SINE Alu -250 53 1 768 296 149 13 chr10 26386670 26387191 -113929574 + L2 LINE L2 2716 3312 -1 2281 122 0 0 chr10 26388269 26388573 -113928192 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 26389651 26390046 -113926719 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 26391106 26391418 -113925347 - AluJo SINE Alu -12 300 1 2172 103 26 10 chr10 26392054 26392356 -113924409 + AluSx SINE Alu 2 308 -4 621 208 75 31 chr10 26392630 26392789 -113923976 + MIR SINE MIR 92 257 -5 708 302 100 33 chr10 26392956 26394120 -113922645 - L1ME3A LINE L1 -206 5964 4685 243 0 0 0 chr10 26394142 26394169 -113922596 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 26394171 26394458 -113922307 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 26394525 26395041 -113921724 - L1ME3A LINE L1 -1830 4316 3730 2938 90 6 8 chr10 26395072 26395437 -113921328 - THE1B LTR MaLR 0 364 1 2199 102 0 41 chr10 26396054 26396369 -113920396 - AluY SINE Alu -9 302 1 1864 157 28 0 chr10 26396442 26396604 -113920161 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 26396604 26396864 -113919901 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 26396864 26396988 -113919777 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 26397220 26397241 -113919524 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 26397568 26397675 -113919090 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 26397748 26398053 -113918712 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 26398459 26398622 -113918143 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 26398666 26399114 -113917651 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 26399493 26399787 -113916978 + AluSx SINE Alu 1 292 -20 413 297 95 23 chr10 26400588 26400804 -113915961 + MIR SINE MIR 19 250 -12 415 211 0 11 chr10 26401784 26401874 -113914891 - L2 LINE L2 -1 3312 3224 839 117 102 22 chr10 26401890 26402027 -113914738 + FRAM SINE Alu 21 168 -8 259 324 33 56 chr10 26402027 26402240 -113914525 - L2 LINE L2 -94 3219 3012 1062 236 114 64 chr10 26402240 26402790 -113913975 - HAL1 LINE L1 -898 1609 1032 347 304 63 87 chr10 26402798 26403011 -113913754 - HAL1 LINE L1 -1575 932 728 1553 196 0 11 chr10 26403011 26403286 -113913479 + AluJb SINE Alu 1 272 -40 347 304 63 87 chr10 26403286 26403404 -113913361 - HAL1 LINE L1 -1779 728 609 3849 132 2 8 chr10 26403547 26404077 -113912688 - MER1A DNA MER1_type 0 527 1 334 264 100 36 chr10 26404236 26404376 -113912389 - HAL1 LINE L1 -2358 149 1 650 210 107 24 chr10 26404492 26404682 -113912083 - MLT1G1 LTR MaLR 0 595 332 254 183 0 33 chr10 26404858 26404918 -113911847 - MLT1G1 LTR MaLR -374 175 118 2347 100 20 0 chr10 26405269 26405568 -113911197 - AluSx SINE Alu -7 305 1 1762 186 3 0 chr10 26405615 26405905 -113910860 - AluJo SINE Alu -21 291 1 186 128 0 0 chr10 26406455 26406494 -113910271 + (T)n Simple_repeat Simple_repeat 1 39 0 368 306 52 52 chr10 26406690 26406863 -113909902 - MIR3 SINE MIR -16 192 20 240 35 0 0 chr10 26407148 26407177 -113909588 + (TC)n Simple_repeat Simple_repeat 2 30 0 2258 106 6 6 chr10 26407177 26407489 -113909276 - AluSx SINE Alu 0 312 1 1668 177 7 3 chr10 26407498 26407786 -113908979 - AluJo SINE Alu -23 289 1 266 326 11 11 chr10 26407949 26408044 -113908721 - MIR3 SINE MIR -50 158 64 2250 112 0 0 chr10 26409011 26409306 -113907459 - AluSx SINE Alu -17 295 1 2478 75 0 0 chr10 26409622 26409930 -113906835 + AluY SINE Alu 1 308 -3 255 61 0 0 chr10 26411052 26411085 -113905680 + (A)n Simple_repeat Simple_repeat 1 33 0 1724 215 66 35 chr10 26412625 26413113 -113903652 - MLT1D LTR MaLR -2 503 1 201 213 0 0 chr10 26415789 26415836 -113900929 + (TG)n Simple_repeat Simple_repeat 1 47 0 533 282 82 20 chr10 26416012 26416057 -113900708 - MIR SINE MIR -1 261 220 2044 132 31 0 chr10 26416057 26416345 -113900420 - AluSx SINE Alu -13 299 3 533 282 82 20 chr10 26416345 26416544 -113900221 - MIR SINE MIR -42 220 2 580 254 92 40 chr10 26416812 26417139 -113899626 + L1MC5 LINE L1 7581 7924 -37 2026 119 3 3 chr10 26417143 26417457 -113899308 - AluSx SINE Alu 0 314 1 201 444 41 0 chr10 26417487 26417656 -113899109 + L2 LINE L2 2999 3174 -98 408 276 122 13 chr10 26418232 26418388 -113898377 - MIR SINE MIR -38 224 52 8182 20 0 0 chr10 26418528 26419451 -113897314 - L1PA4 LINE L1 -3 6152 5230 222 37 0 0 chr10 26419544 26419571 -113897194 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 710 304 9 17 chr10 26419819 26420049 -113896716 - MIR SINE MIR -3 259 32 2047 50 35 15 chr10 26420352 26420647 -113896118 - L1PA5 LINE L1 0 6154 5890 2329 96 0 0 chr10 26420995 26421286 -113895479 + AluSc SINE Alu 1 291 -18 1752 173 6 6 chr10 26421520 26421832 -113894933 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 26423408 26423431 -113893334 + AT_rich Low_complexity Low_complexity 1 23 0 633 243 101 0 chr10 26423822 26423991 -113892774 - MIR SINE MIR -59 203 18 21 0 0 0 chr10 26424063 26424084 -113892681 + AT_rich Low_complexity Low_complexity 1 21 0 1683 97 10 59 chr10 26425491 26425537 -113891228 + L1MA2 LINE L1 6029 6076 -228 2418 58 7 29 chr10 26425537 26425845 -113890920 + AluY SINE Alu 1 301 -10 1683 97 10 59 chr10 26425845 26426088 -113890677 + L1MA2 LINE L1 6076 6304 0 310 317 30 64 chr10 26426121 26426323 -113890442 - MIR3 SINE MIR -6 202 8 26 0 0 0 chr10 26428458 26428484 -113888281 + AT_rich Low_complexity Low_complexity 1 26 0 1888 149 10 3 chr10 26429036 26429331 -113887434 - AluJb SINE Alu -15 297 1 2299 98 3 0 chr10 26429851 26430147 -113886618 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 26430157 26430179 -113886586 + AT_rich Low_complexity Low_complexity 1 22 0 288 169 0 133 chr10 26430473 26430490 -113886275 - AluJo SINE Alu 0 302 284 252 59 0 0 chr10 26430490 26430524 -113886241 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 169 0 133 chr10 26430524 26430589 -113886176 - AluJo SINE Alu -18 284 231 1510 151 12 27 chr10 26430589 26430848 -113885917 - AluJo SINE Alu -57 255 1 397 262 48 0 chr10 26431746 26431872 -113884893 + MIR SINE MIR 80 211 -51 961 173 16 26 chr10 26432077 26432268 -113884497 + MER5A DNA MER1_type 1 189 0 195 200 0 0 chr10 26432700 26432740 -113884025 - L3 LINE CR1 -1 1576 1537 1611 202 0 34 chr10 26432786 26433108 -113883657 + AluJo SINE Alu 1 311 -1 235 0 0 54 chr10 26434474 26434511 -113882254 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2043 131 0 3 chr10 26434519 26434802 -113881963 - AluSx SINE Alu -30 282 1 311 264 30 12 chr10 26435197 26435364 -113881401 + (TA)n Simple_repeat Simple_repeat 1 170 0 180 0 0 0 chr10 26436580 26436600 -113880165 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 1746 160 4 7 chr10 26437640 26437921 -113878844 - AluJb SINE Alu -21 291 12 402 74 0 0 chr10 26440933 26440987 -113875778 + (TG)n Simple_repeat Simple_repeat 2 55 0 24 77 0 0 chr10 26442173 26442225 -113874540 + AT_rich Low_complexity Low_complexity 1 52 0 1789 148 7 11 chr10 26442254 26442567 -113874198 - AluSx SINE Alu 0 317 6 189 0 0 0 chr10 26442758 26442779 -113873986 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2209 101 0 0 chr10 26442779 26443057 -113873708 - AluSx SINE Alu -32 280 3 316 164 0 49 chr10 26444673 26444734 -113872031 - Tigger2a DNA MER2_type 0 434 377 2384 97 0 13 chr10 26444749 26445059 -113871706 + AluSx SINE Alu 1 306 -6 912 164 6 40 chr10 26445169 26445346 -113871419 - Tigger2a DNA MER2_type -263 171 1 1873 189 59 66 chr10 26445711 26446199 -113870566 - MLT1D LTR MaLR 0 505 21 2274 120 0 0 chr10 26447990 26448290 -113868475 + AluSq SINE Alu 1 300 -13 333 159 19 9 chr10 26449856 26449963 -113866802 + (CA)n Simple_repeat Simple_repeat 1 108 0 922 241 27 27 chr10 26450267 26450528 -113866237 - MIR SINE MIR 0 262 2 952 157 26 92 chr10 26452569 26452651 -113864114 - MER20 DNA MER1_type 0 219 133 2871 143 13 4 chr10 26452651 26453104 -113863661 - MSTB2 LTR MaLR 0 457 1 952 157 26 92 chr10 26453104 26453250 -113863515 - MER20 DNA MER1_type -86 133 6 636 250 0 7 chr10 26453489 26453637 -113863128 + MIR SINE MIR 26 172 -90 1925 154 13 13 chr10 26455792 26456091 -113860674 + AluJo SINE Alu 3 301 -11 469 298 19 0 chr10 26456306 26456514 -113860251 + L2 LINE L2 2545 2756 -558 189 0 0 0 chr10 26457156 26457177 -113859588 + (TTTTTA)n Simple_repeat Simple_repeat 5 25 0 * 600 153 0 0 chr10 26457176 26457294 -113859471 + (TA)n Simple_repeat Simple_repeat 1 118 0 2333 79 16 16 chr10 26457294 26457599 -113859166 - AluSx SINE Alu -7 305 1 895 157 13 26 chr10 26457625 26457778 -113858987 - FRAM SINE Alu -15 151 1 21 0 0 0 chr10 26458142 26458163 -113858602 + AT_rich Low_complexity Low_complexity 1 21 0 402 278 87 10 chr10 26458430 26458718 -113858047 + L2 LINE L2 2911 3313 0 189 275 25 38 chr10 26458826 26458906 -113857859 - MIR SINE MIR -87 175 97 908 283 102 20 chr10 26458922 26459382 -113857383 + L2 LINE L2 2304 2801 -513 330 284 0 71 chr10 26459397 26459524 -113857241 - MER94 DNA DNA -15 119 2 1169 266 64 39 chr10 26459542 26460026 -113856739 + L2 LINE L2 2815 3310 -3 304 232 14 0 chr10 26461988 26462057 -113854708 + L2 LINE L2 3238 3307 -6 543 122 12 12 chr10 26462224 26462306 -113854459 + AluJ/FRAM SINE Alu 214 295 -17 1919 141 37 7 chr10 26462640 26462938 -113853827 + AluJb SINE Alu 1 307 -5 2515 93 0 0 chr10 26464476 26464788 -113851977 - AluSx SINE Alu 0 312 1 2269 96 7 0 chr10 26466051 26466344 -113850421 - AluSx SINE Alu -17 295 1 338 200 0 0 chr10 26466967 26467037 -113849728 - AluS SINE Alu -3 298 229 1044 66 0 0 chr10 26467037 26467158 -113849607 - AluSq/x SINE Alu -192 121 1 186 133 0 0 chr10 26468593 26468623 -113848142 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 313 294 17 17 chr10 26469778 26469897 -113846868 - MIR SINE MIR -30 232 114 193 273 0 61 chr10 26470351 26470417 -113846348 - MIR SINE MIR -111 151 90 400 240 47 16 chr10 26470517 26470646 -113846119 - MIR SINE MIR -63 199 67 1778 175 45 0 chr10 26470649 26470935 -113845830 + AluJb SINE Alu 1 299 -13 1240 99 6 11 chr10 26471000 26471181 -113845584 + L1PB3 LINE L1 5968 6147 -7 1554 160 53 11 chr10 26471739 26472021 -113844744 + AluJb SINE Alu 1 294 -18 364 279 121 46 chr10 26472347 26472627 -113844138 - MARNA DNA Mariner -13 573 273 2301 109 3 6 chr10 26472649 26472962 -113843803 + AluSx SINE Alu 1 312 0 306 0 0 0 chr10 26473383 26473417 -113843348 + (TG)n Simple_repeat Simple_repeat 2 35 0 195 42 0 0 chr10 26473456 26473480 -113843285 + (TG)n Simple_repeat Simple_repeat 2 25 0 186 133 0 0 chr10 26473519 26473549 -113843216 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 31 0 0 chr10 26473588 26473620 -113843145 + (TG)n Simple_repeat Simple_repeat 2 33 0 794 147 8 0 chr10 26473999 26474128 -113842637 + FLAM_C SINE Alu 1 130 -3 180 163 0 0 chr10 26474262 26474305 -113842460 + A-rich Low_complexity Low_complexity 1 43 0 2691 39 0 3 chr10 26474935 26475247 -113841518 - AluY SINE Alu 0 311 1 225 65 0 0 chr10 26475439 26475470 -113841295 + (T)n Simple_repeat Simple_repeat 1 31 0 203 263 0 92 chr10 26475815 26475891 -113840874 - L2 LINE L2 -53 3219 3151 1767 168 17 0 chr10 26475909 26476201 -113840564 + AluSg SINE Alu 1 297 -13 458 345 26 9 chr10 26476736 26476968 -113839797 - Charlie8 DNA MER1_type -2172 245 10 353 321 36 21 chr10 26478157 26478297 -113838468 - MER5B DNA MER1_type -1 177 36 2369 298 104 25 chr10 26479753 26481181 -113835584 + L1MEc LINE L1 45 1586 -4810 2278 240 78 6 chr10 26481179 26481863 -113834902 + L1M4 LINE L1 3589 4321 -1825 * 294 169 26 52 chr10 26481867 26481944 -113834821 + L1ME LINE L1 5770 5844 -322 252 235 153 31 chr10 26482476 26482496 -113834269 - L2 LINE L2 0 3313 3297 2592 108 19 100 chr10 26482496 26482968 -113833797 - Tigger2a DNA MER2_type 0 434 1 252 235 153 31 chr10 26482968 26483045 -113833720 - L2 LINE L2 -16 3297 3204 312 250 20 20 chr10 26483080 26483180 -113833585 + MIR SINE MIR 36 135 -73 429 259 18 0 chr10 26483384 26483496 -113833269 + MER5B DNA MER1_type 10 123 -55 192 258 97 21 chr10 26483902 26483995 -113832770 - L2 LINE L2 -294 3019 2920 689 87 0 0 chr10 26483998 26484090 -113832675 + AluSg/x SINE Alu 210 301 -9 1329 143 14 21 chr10 26484370 26484606 -113832159 + L1M3 LINE L1 5441 5664 -519 1943 105 0 25 chr10 26484637 26484913 -113831852 + AluY SINE Alu 37 305 -6 517 286 102 0 chr10 26485130 26485326 -113831439 - MIR SINE MIR -45 217 2 291 318 0 23 chr10 26486065 26486194 -113830571 - MIR SINE MIR -116 146 21 922 143 0 0 chr10 26486911 26487044 -113829721 + FLAM_A SINE Alu 1 133 0 2544 70 3 3 chr10 26487949 26488262 -113828503 + AluSp SINE Alu 1 313 0 32 86 0 0 chr10 26488844 26488925 -113827840 + AT_rich Low_complexity Low_complexity 1 81 0 2234 107 0 3 chr10 26488925 26489215 -113827550 - AluSx SINE Alu -23 289 1 1832 188 3 0 chr10 26489637 26489945 -113826820 + AluJo SINE Alu 1 309 -3 327 270 104 26 chr10 26490292 26490407 -113826358 + MER5A DNA MER1_type 66 189 0 1582 145 35 75 chr10 26490725 26491043 -113825722 + AluJb SINE Alu 1 305 -7 734 192 45 0 chr10 26491171 26491327 -113825438 + L1MA4 LINE L1 6127 6289 -11 201 121 0 0 chr10 26491420 26491453 -113825312 + (TTC)n Simple_repeat Simple_repeat 1 33 0 2132 128 7 0 chr10 26491560 26491857 -113824908 + AluSx SINE Alu 1 299 -13 854 171 40 92 chr10 26493314 26493542 -113823223 + MER20 DNA MER1_type 1 216 -3 276 100 0 0 chr10 26493589 26493629 -113823136 + (TC)n Simple_repeat Simple_repeat 1 40 0 427 276 8 16 chr10 26494176 26494303 -113822462 - L2 LINE L2 0 3313 3188 605 92 0 31 chr10 26494401 26494499 -113822266 + FLAM_C SINE Alu 48 142 -1 225 0 0 0 chr10 26494499 26494524 -113822241 + (TA)n Simple_repeat Simple_repeat 2 26 0 1062 162 15 41 chr10 26494531 26494728 -113822037 + AluJb SINE Alu 118 309 -3 24 0 0 0 chr10 26494728 26494752 -113822013 + AT_rich Low_complexity Low_complexity 1 24 0 1700 125 0 106 chr10 26494759 26494911 -113821854 + AluJo SINE Alu 3 107 -205 2007 120 57 0 chr10 26494911 26495194 -113821571 + AluSx SINE Alu 1 299 -13 1700 125 0 106 chr10 26495194 26495352 -113821413 + AluJo SINE Alu 107 280 -32 714 152 0 32 chr10 26496057 26496182 -113820583 + FRAM SINE Alu 33 153 -23 1504 138 89 0 chr10 26496562 26496809 -113819956 + AluSx SINE Alu 1 269 -43 1435 154 6 115 chr10 26496855 26497185 -113819580 + AluJo SINE Alu 3 296 -6 212 167 0 0 chr10 26497470 26497506 -113819259 + (CAT)n Simple_repeat Simple_repeat 3 38 0 715 180 21 142 chr10 26498871 26499110 -113817655 + MER63A DNA MER1_type 1 210 0 1780 152 7 14 chr10 26499554 26499843 -113816922 + AluJb SINE Alu 1 287 -25 761 132 0 0 chr10 26500462 26500568 -113816197 + FLAM_C SINE Alu 2 107 -36 545 161 31 0 chr10 26500590 26500720 -113816045 + GA-rich Low_complexity Low_complexity 1 134 0 2328 105 0 0 chr10 26500791 26501097 -113815668 - AluSg1 SINE Alu -3 306 1 216 0 0 0 chr10 26501283 26501307 -113815458 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2076 100 4 7 chr10 26501310 26501589 -113815176 - AluSx SINE Alu -28 284 7 2328 104 0 0 chr10 26502296 26502593 -113814172 - AluSg SINE Alu -13 297 1 1931 156 0 10 chr10 26502841 26503130 -113813635 - AluSx SINE Alu -26 286 1 716 139 0 16 chr10 26503132 26503254 -113813511 - FLAM_A SINE Alu -2 140 21 411 309 44 12 chr10 26504244 26504411 -113812354 - MIR3 SINE MIR -24 184 13 214 238 0 0 chr10 26505759 26505801 -113810964 + GA-rich Low_complexity Low_complexity 1 42 0 204 170 19 38 chr10 26508215 26508268 -113808497 + CT-rich Low_complexity Low_complexity 2 53 0 260 169 0 17 chr10 26509081 26509140 -113807625 + CT-rich Low_complexity Low_complexity 3 60 0 2014 135 0 35 chr10 26510004 26510316 -113806449 + AluJb SINE Alu 1 301 -11 2923 176 29 41 chr10 26511000 26511061 -113805704 - MER73 LTR ERVL 0 644 584 2361 77 0 0 chr10 26511061 26511348 -113805417 - AluY SINE Alu -24 287 1 2923 176 29 41 chr10 26511348 26511938 -113804827 - MER73 LTR ERVL -60 584 1 913 183 0 24 chr10 26512059 26512223 -113804542 - FRAM SINE Alu -17 159 1 332 311 172 0 chr10 26512386 26512537 -113804228 + MIR SINE MIR 68 244 -18 2144 119 3 3 chr10 26512548 26512843 -113803922 + AluSx SINE Alu 1 295 -17 256 213 93 73 chr10 26513935 26514085 -113802680 - MIR SINE MIR -3 259 107 1175 255 109 39 chr10 26514976 26515407 -113801358 - MER20B DNA MER1_type -322 461 1 2017 146 0 7 chr10 26515662 26515964 -113800801 + AluSx SINE Alu 1 300 -12 553 249 18 12 chr10 26516261 26516430 -113800335 - MER5B DNA MER1_type -6 172 3 2265 134 91 10 chr10 26517892 26518287 -113798478 - MSTA LTR MaLR 0 428 2 651 144 29 83 chr10 26519438 26519472 -113797293 + L1MA5A LINE L1 6112 6146 -154 2283 99 0 0 chr10 26519472 26519765 -113797000 - AluSg SINE Alu -17 293 1 651 144 29 83 chr10 26519765 26519904 -113796861 + L1MA5A LINE L1 6146 6273 -27 333 152 0 54 chr10 26519961 26520073 -113796692 + (TA)n Simple_repeat Simple_repeat 1 106 0 228 239 0 43 chr10 26520086 26520178 -113796587 + (TA)n Simple_repeat Simple_repeat 2 89 0 312 155 0 36 chr10 26520291 26520375 -113796390 + (TA)n Simple_repeat Simple_repeat 1 81 0 332 43 0 21 chr10 26520716 26520763 -113796002 + (TA)n Simple_repeat Simple_repeat 2 47 0 263 154 58 0 chr10 26520763 26520815 -113795950 + L1MA5A LINE L1 6237 6291 -6 1508 154 47 8 chr10 26521275 26521528 -113795237 + AluJo SINE Alu 33 295 -17 389 331 51 44 chr10 26521648 26521923 -113794842 - L3 LINE CR1 -529 1048 772 1719 149 52 21 chr10 26522120 26522408 -113794357 - AluJo SINE Alu -5 307 11 647 236 71 57 chr10 26522662 26522874 -113793891 + MER20 DNA MER1_type 5 219 0 213 296 19 0 chr10 26523130 26523184 -113793581 + polypyrimidine Low_complexity Low_complexity 4 58 0 23 0 0 0 chr10 26523949 26523972 -113792793 + AT_rich Low_complexity Low_complexity 1 23 0 1747 150 44 49 chr10 26524098 26524465 -113792300 + MLT1A1 LTR MaLR 1 365 0 1214 258 115 29 chr10 26524557 26525220 -113791545 - L1ME3A LINE L1 -8 6162 5406 924 229 110 27 chr10 26525234 26525538 -113791227 - MLT1E LTR MaLR -3 590 316 2663 238 52 32 chr10 26525708 26526624 -113790141 - L1ME1 LINE L1 -8 6158 5262 2170 139 0 0 chr10 26526624 26526927 -113789838 - AluSx SINE Alu -8 304 2 2663 238 52 32 chr10 26526927 26527724 -113789041 - L1ME1 LINE L1 -904 5262 4482 2401 94 3 0 chr10 26527724 26528031 -113788734 + AluSx SINE Alu 1 308 -4 2663 238 52 32 chr10 26528031 26528935 -113787830 - L1ME1 LINE L1 -1684 4482 3432 2128 140 0 0 chr10 26528935 26529242 -113787523 - AluSx SINE Alu -5 307 1 2663 238 52 32 chr10 26529242 26529425 -113787340 - L1ME1 LINE L1 -2734 3432 3254 771 229 76 28 chr10 26529491 26529779 -113786986 - L1M4 LINE L1 -2189 3957 3656 487 213 0 57 chr10 26529901 26530042 -113786723 - L1 LINE L1 -2168 3978 3846 710 237 73 20 chr10 26530075 26530320 -113786445 + MIR SINE MIR 2 259 -3 307 282 100 9 chr10 26530366 26530476 -113786289 + MER115 DNA AcHobo 2 121 -572 460 318 45 6 chr10 26530581 26530757 -113786008 + MER115 DNA AcHobo 162 344 -349 989 280 92 45 chr10 26530861 26531439 -113785326 + L2 LINE L2 2682 3313 0 1232 221 45 26 chr10 26531692 26532008 -113784757 + L1ME1 LINE L1 5818 6139 -45 2716 91 16 67 chr10 26532008 26532394 -113784371 - L1PB1 LINE L1 -1 6150 5787 2438 97 3 0 chr10 26532394 26532705 -113784060 - AluSx SINE Alu 0 312 1 2716 91 16 67 chr10 26532705 26532748 -113784017 - L1PB1 LINE L1 -364 5787 5743 1232 221 45 26 chr10 26532748 26532795 -113783970 + L1ME1 LINE L1 6139 6184 0 197 289 122 0 chr10 26532795 26532885 -113783880 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 26534005 26534035 -113782730 + (TG)n Simple_repeat Simple_repeat 2 31 0 1804 274 124 24 chr10 26534734 26535556 -113781209 + L2 LINE L2 1715 2618 -696 1451 195 0 45 chr10 26536073 26536360 -113780405 + AluJo SINE Alu 1 274 -38 345 140 0 0 chr10 26536365 26536422 -113780343 + (CA)n Simple_repeat Simple_repeat 1 57 0 312 256 0 35 chr10 26536564 26536650 -113780115 - MIR SINE MIR -66 142 60 300 27 0 0 chr10 26537259 26537296 -113779469 + (TG)n Simple_repeat Simple_repeat 1 37 0 281 282 53 30 chr10 26537828 26537959 -113778806 + MIR SINE MIR 16 149 -113 4457 206 48 46 chr10 26538365 26539086 -113777679 - L1MD2 LINE L1 -16 6326 5608 2296 114 0 0 chr10 26539086 26539393 -113777372 - AluSg SINE Alu -3 307 1 4457 206 48 46 chr10 26539393 26539424 -113777341 - L1MD2 LINE L1 -734 5608 5579 1711 162 7 16 chr10 26539424 26539727 -113777038 + AluJb SINE Alu 5 304 -8 4457 206 48 46 chr10 26539727 26540141 -113776624 - L1MD2 LINE L1 -763 5579 5150 2189 116 0 0 chr10 26540141 26540433 -113776332 + AluSq SINE Alu 1 292 -21 4457 206 48 46 chr10 26540433 26540728 -113776037 - L1MD2 LINE L1 -1192 5150 4857 753 99 40 0 chr10 26540728 26540829 -113775936 - AluSq/x SINE Alu -206 107 3 540 161 21 0 chr10 26540843 26540936 -113775829 + L1M4 LINE L1 5189 5283 -863 3628 230 67 29 chr10 26540939 26541141 -113775624 - L1MD2 LINE L1 -1280 4849 4656 2491 70 0 10 chr10 26541141 26541455 -113775310 - AluY SINE Alu 0 311 1 3628 230 67 29 chr10 26541455 26542350 -113774415 - L1MD2 LINE L1 -1473 4656 3711 490 280 87 32 chr10 26542344 26542475 -113774290 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 26542475 26542495 -113774270 + (TA)n Simple_repeat Simple_repeat 2 21 0 490 280 87 32 chr10 26542495 26542680 -113774085 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 26542680 26542721 -113774044 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 280 87 32 chr10 26542721 26542981 -113773784 - L1MD2 LINE L1 -1148 1342 984 809 227 91 12 chr10 26543152 26543394 -113773371 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 26543802 26543835 -113772930 + AT_rich Low_complexity Low_complexity 1 33 0 217 302 0 0 chr10 26544481 26544544 -113772221 - MIR SINE MIR -13 249 187 2542 152 25 23 chr10 26544559 26544608 -113772157 + Tigger2a DNA MER2_type 1 48 -2660 3595 202 79 4 chr10 26544608 26545291 -113771474 + MER50 LTR ERV1 1 734 0 2542 152 25 23 chr10 26545291 26545674 -113771091 + Tigger2a DNA MER2_type 48 434 0 219 216 307 0 chr10 26545675 26545763 -113771002 - MIR SINE MIR -90 172 58 198 300 20 0 chr10 26546227 26546277 -113770488 + MIR SINE MIR 211 261 -1 2026 100 82 4 chr10 26546320 26546599 -113770166 + AluSg SINE Alu 1 301 -9 1271 241 103 28 chr10 26546671 26547316 -113769449 + L2 LINE L2 2527 3235 -78 2347 101 0 0 chr10 26547345 26547653 -113769112 - AluSx SINE Alu -4 308 1 1282 178 38 48 chr10 26547734 26548026 -113768739 + AluJo SINE Alu 1 289 -23 784 190 110 0 chr10 26548651 26548814 -113767951 + MER5A DNA MER1_type 9 189 0 1891 179 81 27 chr10 26549807 26550176 -113766589 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 26550752 26550773 -113765992 + AT_rich Low_complexity Low_complexity 1 21 0 2242 127 3 6 chr10 26552063 26552377 -113764388 + AluSq SINE Alu 1 313 0 217 274 0 0 chr10 26553107 26553158 -113763607 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 26553176 26553256 -113763509 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 219 36 0 0 chr10 26553868 26553896 -113762869 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 14410 54 4 3 chr10 26554145 26556634 -113760131 - L1PA5 LINE L1 -1 6153 3658 1703 167 7 24 chr10 26556829 26557144 -113759621 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 26557402 26557503 -113759262 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 26557938 26558008 -113758757 + L3b LINE CR1 1296 1365 -218 601 193 25 144 chr10 26558754 26558874 -113757891 + MER96B DNA MER1_type? 3 136 -281 2015 82 4 11 chr10 26558874 26559143 -113757622 + AluY SINE Alu 5 271 -40 601 193 25 144 chr10 26559143 26559171 -113757594 + MER96B DNA MER1_type? 136 124 -293 1440 179 0 12 chr10 26559171 26559411 -113757354 + L1MC1 LINE L1 6086 6322 -11 601 193 25 144 chr10 26559411 26559463 -113757302 + MER96B DNA MER1_type? 123 180 -237 484 206 0 0 chr10 26560560 26560633 -113756132 + AluJ/FLAM SINE Alu 2 74 -238 343 267 0 0 chr10 26612378 26612453 -113704312 - MIR SINE MIR -185 77 3 1723 120 39 25 chr10 26612454 26612766 -113703999 + AluJo SINE Alu 1 316 0 1488 167 26 34 chr10 26613119 26613388 -113703377 + AluJo SINE Alu 1 267 -45 1148 119 0 0 chr10 26613435 26613586 -113703179 + AluSq/x SINE Alu 1 151 -161 1455 161 66 49 chr10 26613839 26614144 -113702621 - AluJb SINE Alu -2 310 1 2287 105 0 3 chr10 26615090 26615386 -113701379 - AluSx SINE Alu -15 297 3 207 0 0 0 chr10 26615778 26615801 -113700964 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1598 126 114 11 chr10 26616241 26616512 -113700253 + AluSg SINE Alu 1 299 -11 27 29 0 0 chr10 26617363 26617397 -113699368 + AT_rich Low_complexity Low_complexity 1 34 0 829 138 29 36 chr10 26617922 26618060 -113698705 + FLAM_C SINE Alu 1 137 -6 347 282 74 20 chr10 26618108 26618257 -113698508 + HAL1b LINE L1 58 214 -1134 393 253 99 50 chr10 26618318 26618500 -113698265 + MLT1J LTR MaLR 71 261 -250 468 176 0 0 chr10 26618504 26618589 -113698176 + MER53 DNA DNA 1 85 -104 295 202 10 71 chr10 26618520 26618619 -113698146 - MER53 DNA DNA -7 182 90 * 183 80 0 0 chr10 26618620 26618645 -113698120 + (A)n Simple_repeat Simple_repeat 1 25 0 825 178 14 7 chr10 26618704 26618850 -113697915 + AluJo SINE Alu 5 151 -161 519 213 0 0 chr10 26618859 26618953 -113697812 - AluJ/FLAM SINE Alu -217 95 2 996 231 42 5 chr10 26619085 26619301 -113697464 - MER58A DNA MER1_type 0 224 1 2182 114 3 7 chr10 26619334 26619633 -113697132 - AluSq SINE Alu -15 298 1 25 0 0 0 chr10 26619708 26619733 -113697032 + AT_rich Low_complexity Low_complexity 1 25 0 804 176 0 0 chr10 26619735 26619860 -113696905 - FLAM_C SINE Alu -18 125 1 225 282 77 0 chr10 26619969 26620047 -113696718 - MLT1J LTR MaLR -52 459 376 322 133 0 167 chr10 26620110 26620152 -113696613 - MER53 DNA DNA 0 189 167 1946 112 0 76 chr10 26620152 26620478 -113696287 - AluSg SINE Alu 0 303 1 322 133 0 167 chr10 26620478 26620524 -113696241 - MER53 DNA DNA -22 167 115 1292 152 0 27 chr10 26620525 26620749 -113696016 - AluJo SINE Alu -11 301 84 216 0 0 0 chr10 26620867 26620891 -113695874 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2264 68 0 7 chr10 26620893 26621172 -113695593 - AluSg1 SINE Alu -32 277 1 302 261 42 2 chr10 26621202 26621335 -113695430 + L1P5 LINE L1 5306 5442 -712 1773 92 0 9 chr10 26621550 26621779 -113694986 + AluSg/x SINE Alu 65 291 -21 1123 273 64 8 chr10 26621877 26622265 -113694500 + L2 LINE L2 2389 2798 -516 650 219 89 113 chr10 26622360 26622730 -113694035 + L2 LINE L2 2936 3296 -17 681 266 0 0 chr10 26622744 26622902 -113693863 + FRAM SINE Alu 4 161 -5 328 123 15 15 chr10 26622906 26622971 -113693794 + A-rich Low_complexity Low_complexity 4 68 0 227 180 0 80 chr10 26623104 26623154 -113693611 + Alu SINE Alu 123 168 -135 460 139 0 14 chr10 26623154 26623226 -113693539 + AluJ/FLAM SINE Alu 15 85 -227 1764 144 118 9 chr10 26623550 26623898 -113692867 + LOR1b LTR ERV1 1 386 -75 2280 93 7 0 chr10 26623911 26624200 -113692565 + AluSc SINE Alu 1 291 -18 24 32 0 0 chr10 26624261 26624292 -113692473 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 26624298 26624329 -113692436 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 26624340 26624368 -113692397 + AT_rich Low_complexity Low_complexity 1 28 0 232 259 23 23 chr10 26624378 26624509 -113692256 + (TTTA)n Simple_repeat Simple_repeat 3 133 0 2235 119 0 0 chr10 26624732 26625034 -113691731 - AluSq SINE Alu -11 302 1 234 0 0 0 chr10 26626146 26626172 -113690593 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 99 3 3 chr10 26626460 26626754 -113690011 + AluSx SINE Alu 1 294 -18 2032 123 35 0 chr10 26627704 26627989 -113688776 - AluSx SINE Alu -17 295 1 1180 218 45 42 chr10 26628215 26628277 -113688488 + Charlie2 DNA MER1_type 2426 2486 -376 1585 185 3 54 chr10 26628277 26628590 -113688175 + AluJo SINE Alu 1 297 -15 1477 181 34 31 chr10 26628595 26628887 -113687878 + AluJo SINE Alu 3 295 -17 1180 218 45 42 chr10 26628887 26628995 -113687770 + Charlie2 DNA MER1_type 2489 2595 -267 2079 128 3 13 chr10 26628995 26629308 -113687457 - AluSx SINE Alu -2 310 1 1180 218 45 42 chr10 26629308 26629530 -113687235 + Charlie2 DNA MER1_type 2595 2826 -36 2594 67 0 3 chr10 26630026 26630362 -113686403 - AluY SINE Alu 0 335 1 297 0 0 0 chr10 26630494 26630527 -113686238 + (TG)n Simple_repeat Simple_repeat 2 34 0 1822 172 0 0 chr10 26630528 26630813 -113685952 - AluSx SINE Alu -27 285 1 474 226 88 13 chr10 26630976 26631135 -113685630 + L1ME LINE L1 5598 5768 -353 22 0 0 0 chr10 26631411 26631433 -113685332 + AT_rich Low_complexity Low_complexity 1 22 0 280 313 146 26 chr10 26631508 26631741 -113685024 - MIR SINE MIR 0 262 2 718 266 68 10 chr10 26632046 26632253 -113684512 + Charlie8 DNA MER1_type 2 220 -2197 1860 134 42 23 chr10 26632444 26632623 -113684142 - AluJb SINE Alu 0 312 123 2176 120 3 13 chr10 26632623 26632932 -113683833 - AluSx SINE Alu -4 308 3 1860 134 42 23 chr10 26632932 26633058 -113683707 - AluJb SINE Alu -189 123 1 593 302 117 32 chr10 26635501 26635971 -113680794 + L2 LINE L2 2245 2754 -560 209 336 164 0 chr10 26636215 26636337 -113680428 + L2 LINE L2 2085 2226 -1088 3226 160 34 24 chr10 26636442 26637030 -113679735 - L1PB4 LINE L1 -5 6151 5558 2343 180 9 32 chr10 26637033 26637463 -113679302 + L1 LINE L1 3256 3694 -2452 1710 187 3 7 chr10 26637463 26637762 -113679003 + AluJo SINE Alu 1 298 -14 2343 180 9 32 chr10 26637762 26637778 -113678987 + L1 LINE L1 3694 3709 -2437 225 0 0 0 chr10 26637778 26637803 -113678962 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2343 180 9 32 chr10 26637803 26637883 -113678882 + L1 LINE L1 3709 3771 -2375 479 288 87 93 chr10 26638333 26638656 -113678109 + L2 LINE L2 2944 3264 -8 2174 118 0 0 chr10 26638826 26639123 -113677642 + AluSg SINE Alu 6 302 -8 303 234 0 0 chr10 26639124 26639201 -113677564 + GA-rich Low_complexity Low_complexity 1 77 0 420 185 111 85 chr10 26639837 26639929 -113676836 + MLT1D LTR MaLR 12 100 -367 2049 126 7 7 chr10 26639929 26640223 -113676542 - AluSx SINE Alu -18 294 1 420 185 111 85 chr10 26640223 26640355 -113676410 + MLT1D LTR MaLR 100 256 -211 2007 153 46 6 chr10 26640372 26640699 -113676066 + MER2 DNA MER2_type 1 340 -4 24 32 0 0 chr10 26641437 26641468 -113675297 + AT_rich Low_complexity Low_complexity 1 31 0 889 142 0 8 chr10 26641646 26641780 -113674985 - FLAM_C SINE Alu 0 133 1 2357 88 13 0 chr10 26642760 26643067 -113673698 + AluY SINE Alu 1 311 0 1447 155 4 4 chr10 26643396 26643622 -113673143 + AluSx SINE Alu 61 286 -26 1881 134 14 7 chr10 26644232 26644515 -113672250 + AluSx SINE Alu 1 285 -27 29 0 0 0 chr10 26644515 26644544 -113672221 + AT_rich Low_complexity Low_complexity 1 29 0 530 292 77 29 chr10 26645083 26645292 -113671473 - MIR SINE MIR -42 220 2 2122 107 11 0 chr10 26645366 26645669 -113671096 + AluSx SINE Alu 1 306 0 228 128 0 0 chr10 26645670 26645709 -113671056 + L1MDa LINE L1 83 121 -6419 * 4334 135 67 52 chr10 26645708 26646397 -113670368 + L1MD1 LINE L1 5378 6083 -159 2367 79 0 25 chr10 26646397 26646715 -113670050 - AluSq SINE Alu -3 310 1 4334 135 67 52 chr10 26646715 26646867 -113669898 + L1MD1 LINE L1 6083 6231 -11 2094 135 0 10 chr10 26647012 26647323 -113669442 + AluSx SINE Alu 1 308 -4 271 158 0 0 chr10 26647575 26647632 -113669133 - L1MB3 LINE L1 0 6183 6127 689 152 22 36 chr10 26647659 26647767 -113668998 - L1MB3 LINE L1 -245 5938 5831 1590 191 10 10 chr10 26647767 26648065 -113668700 - AluJo SINE Alu -14 298 1 689 152 22 36 chr10 26648065 26648094 -113668671 - L1MB3 LINE L1 -352 5831 5803 2213 86 3 38 chr10 26648094 26648408 -113668357 + AluSx SINE Alu 1 303 -9 1849 133 4 4 chr10 26648485 26648756 -113668009 + AluJb SINE Alu 18 288 -24 1843 161 10 73 chr10 26648770 26649181 -113667584 - L1MB3 LINE L1 -377 5806 5422 804 21 21 0 chr10 26649492 26649589 -113667176 - AluY SINE Alu -3 308 210 868 165 8 8 chr10 26649611 26649744 -113667021 - FLAM_C SINE Alu 0 133 1 1259 111 6 11 chr10 26649860 26650041 -113666724 - AluSx SINE Alu -131 181 2 26 0 0 0 chr10 26650041 26650067 -113666698 + AT_rich Low_complexity Low_complexity 1 26 0 188 309 75 11 chr10 26650358 26650452 -113666313 + L2 LINE L2 3173 3272 0 846 191 0 0 chr10 26650454 26650585 -113666180 + FLAM_C SINE Alu 1 131 -2 2112 114 185 27 chr10 26650601 26650968 -113665797 - MSTA LTR MaLR -3 425 1 273 296 148 0 chr10 26651788 26651876 -113664889 + L3 LINE CR1 1449 1549 -28 225 297 106 76 chr10 26652057 26652424 -113664341 - L2 LINE L2 -10 3262 2885 226 79 0 0 chr10 26653047 26653085 -113663680 + LTR66 LTR ERVL 404 441 -169 237 180 0 0 chr10 26653085 26653135 -113663630 + (TA)n Simple_repeat Simple_repeat 2 51 0 2035 125 7 20 chr10 26653218 26653515 -113663250 - AluSx SINE Alu -19 293 1 2124 128 0 10 chr10 26653530 26653842 -113662923 - AluSx SINE Alu -3 309 1 4872 130 52 45 chr10 26654224 26654304 -113662461 + Tigger3b DNA MER2_type 1 79 -2949 2012 123 0 14 chr10 26654304 26654626 -113662139 + AluSx SINE Alu 1 312 0 4872 130 52 45 chr10 26654626 26655171 -113661594 + Tigger3b DNA MER2_type 79 638 -2390 2001 144 0 0 chr10 26655171 26655469 -113661296 + AluSx SINE Alu 1 298 -14 4872 130 52 45 chr10 26655469 26655763 -113661002 + Tigger3b DNA MER2_type 638 928 -303 751 160 0 69 chr10 26655886 26656017 -113660748 + FLAM_C SINE Alu 2 123 -10 23 0 0 0 chr10 26656017 26656040 -113660725 + AT_rich Low_complexity Low_complexity 1 23 0 256 343 112 67 chr10 26657257 26657337 -113659428 + L2 LINE L2 2079 2154 -1160 387 41 0 0 chr10 26657337 26657386 -113659379 + (TC)n Simple_repeat Simple_repeat 1 49 0 256 343 112 67 chr10 26657386 26657799 -113658966 + L2 LINE L2 2154 2608 -706 500 80 13 0 chr10 26657799 26657874 -113658891 + L1MA9 LINE L1 6234 6309 -3 256 343 112 67 chr10 26657874 26658003 -113658762 + L2 LINE L2 2608 2730 -584 209 30 61 0 chr10 26658017 26658050 -113658715 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 894 176 0 20 chr10 26658054 26658207 -113658558 - AluJb SINE Alu -23 289 140 1836 140 43 10 chr10 26658307 26658607 -113658158 - AluSx SINE Alu -2 310 1 23 54 0 0 chr10 26658609 26658646 -113658119 + AT_rich Low_complexity Low_complexity 1 37 0 326 151 174 0 chr10 26659153 26659239 -113657526 + L1M4 LINE L1 4296 4396 -1750 * 498 460 21 61 chr10 26659212 26659242 -113657523 + L1MEc LINE L1 5 35 -6361 180 0 0 0 chr10 26659242 26659262 -113657503 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 498 460 21 61 chr10 26659262 26659609 -113657156 + L1MEc LINE L1 35 367 -6029 1742 177 20 3 chr10 26659640 26659975 -113656790 + AluJo SINE Alu 8 347 0 465 184 16 16 chr10 26659977 26660102 -113656663 + GA-rich Low_complexity Low_complexity 3 127 0 3184 245 60 12 chr10 26660109 26661026 -113655739 + L1MEc LINE L1 393 1353 -5043 258 292 0 10 chr10 26661060 26661156 -113655609 + L1MEc LINE L1 2518 2612 -3603 * 1122 204 43 26 chr10 26661127 26661472 -113655293 + L1MEc LINE L1 3740 4138 -2077 1337 121 35 65 chr10 26661476 26661501 -113655264 + AluSg/x SINE Alu 86 110 -236 2923 82 3 0 chr10 26661501 26661855 -113654910 + THE1A LTR MaLR 1 355 0 1337 121 35 65 chr10 26661855 26662097 -113654668 + AluSg/x SINE Alu 110 346 0 435 247 160 33 chr10 26662697 26662847 -113653918 + MER5A DNA MER1_type 9 177 -12 468 275 188 5 chr10 26663771 26663978 -113652787 - MIR SINE MIR 0 262 18 2076 112 18 0 chr10 26664045 26664347 -113652418 + AluSx SINE Alu 1 307 0 261 273 20 47 chr10 26664352 26664470 -113652295 - MIR SINE MIR -95 113 2 1446 197 4 0 chr10 26666249 26666498 -113650267 - L1PB4 LINE L1 0 6156 5907 1323 128 4 100 chr10 26666550 26666831 -113649934 - L1PA16 LINE L1 -230 5936 5683 1367 148 0 43 chr10 26667239 26667469 -113649296 + AluJb SINE Alu 93 312 0 2289 127 15 66 chr10 26668215 26668338 -113648427 - MLT1B LTR MaLR 0 390 262 2143 114 33 0 chr10 26668338 26668637 -113648128 - AluSx SINE Alu -3 309 1 2289 127 15 66 chr10 26668637 26668811 -113647954 - MLT1B LTR MaLR -128 262 117 1882 187 42 22 chr10 26668811 26669169 -113647596 + MLT1A1 LTR MaLR 1 365 0 2289 127 15 66 chr10 26669169 26669281 -113647484 - MLT1B LTR MaLR -273 117 1 1879 178 0 3 chr10 26669537 26669841 -113646924 + AluJo SINE Alu 1 303 -9 1647 183 7 13 chr10 26670151 26670451 -113646314 + AluJo SINE Alu 5 302 -10 987 120 0 0 chr10 26670465 26670598 -113646167 + FLAM_C SINE Alu 1 133 0 2097 137 0 0 chr10 26671224 26671517 -113645248 - AluSx SINE Alu -19 293 1 257 300 50 78 chr10 26671615 26671795 -113644970 + L2 LINE L2 3138 3312 -1 782 279 70 30 chr10 26672040 26672341 -113644424 + L3 LINE CR1 1133 1445 -132 1785 124 0 4 chr10 26672413 26672662 -113644103 - AluSx SINE Alu -47 265 18 1879 153 0 38 chr10 26672714 26673028 -113643737 + AluJo SINE Alu 1 302 -10 380 74 19 0 chr10 26673028 26673082 -113643683 - HAL1 LINE L1 -1482 1025 971 2205 131 0 0 chr10 26674076 26674388 -113642377 + AluSx SINE Alu 1 312 0 790 263 114 105 chr10 26674452 26675144 -113641621 - HAL1 LINE L1 -140 2367 1662 2196 120 0 10 chr10 26675144 26675445 -113641320 - AluSx SINE Alu -14 298 1 790 263 114 105 chr10 26675445 26675730 -113641035 - HAL1 LINE L1 -845 1662 1381 1612 182 6 42 chr10 26676063 26676376 -113640389 + AluJo SINE Alu 1 302 -10 560 262 37 0 chr10 26676557 26676721 -113640044 + MER112 DNA MER1_type 80 249 -11 462 303 105 110 chr10 26676724 26676990 -113639775 + L3 LINE CR1 580 846 -731 1470 193 44 4 chr10 26676990 26677287 -113639478 - AluJo SINE Alu 0 308 1 462 303 105 110 chr10 26677287 26677418 -113639347 + L3 LINE CR1 846 976 -601 1822 153 0 14 chr10 26677493 26677788 -113638977 - AluSx SINE Alu -21 291 1 186 43 0 0 chr10 26677845 26677868 -113638897 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 166 0 6 chr10 26677987 26678156 -113638609 + AluJb SINE Alu 136 303 -9 294 189 0 19 chr10 26678168 26678221 -113638544 - Alu SINE Alu -247 54 3 57 16 0 0 chr10 26678233 26678297 -113638468 + AT_rich Low_complexity Low_complexity 1 64 0 2431 95 0 0 chr10 26678797 26679102 -113637663 + AluSg SINE Alu 1 305 -5 263 176 54 68 chr10 26679316 26679390 -113637375 + AluSp SINE Alu 97 169 -134 2161 133 0 0 chr10 26680084 26680386 -113636379 - AluSq SINE Alu -11 302 1 1627 165 7 24 chr10 26680391 26680552 -113636213 - AluJo SINE Alu -18 294 139 1962 160 10 3 chr10 26680552 26680858 -113635907 - AluJb SINE Alu -4 308 1 1627 165 7 24 chr10 26680858 26680993 -113635772 - AluJo SINE Alu -173 139 3 609 151 12 0 chr10 26681173 26681259 -113635506 + AluS SINE Alu 2 88 -224 1161 125 6 6 chr10 26681361 26681529 -113635236 - AluSx SINE Alu -144 168 1 2202 182 78 25 chr10 26681534 26681984 -113634781 + MLT2B1 LTR ERVL 5 485 -35 2635 113 83 10 chr10 26681984 26682383 -113634382 + MSTA LTR MaLR 1 428 0 2202 182 78 25 chr10 26682383 26682422 -113634343 + MLT2B1 LTR ERVL 485 520 0 758 179 0 8 chr10 26682719 26682842 -113633923 + FLAM_C SINE Alu 1 122 -11 351 316 9 26 chr10 26683081 26683195 -113633570 + L2 LINE L2 3178 3289 -24 206 326 67 0 chr10 26683508 26683597 -113633168 + MIR SINE MIR 84 146 -62 259 32 0 0 chr10 26683668 26683699 -113633066 + (TTTTA)n Simple_repeat Simple_repeat 2 105 0 1938 127 33 0 chr10 26683699 26683974 -113632791 - AluSx SINE Alu -28 284 1 201 143 125 89 chr10 26684583 26684639 -113632126 - L2 LINE L2 -56 3257 3200 1232 263 178 61 chr10 26685070 26686212 -113630553 - L2 LINE L2 -37 3276 2009 472 325 146 36 chr10 26686247 26686610 -113630155 - L2 LINE L2 0 3272 2870 1338 130 10 0 chr10 26686716 26686916 -113629849 - AluSx SINE Alu -57 255 54 227 322 168 37 chr10 26686922 26687512 -113629253 - L2 LINE L2 -616 2698 2032 288 0 0 0 chr10 26688040 26688072 -113628693 + (CA)n Simple_repeat Simple_repeat 2 33 0 1706 141 36 7 chr10 26689797 26690074 -113626691 - AluJo SINE Alu -7 305 21 1859 159 27 3 chr10 26690358 26690653 -113626112 - AluJb SINE Alu -9 303 2 2263 122 3 0 chr10 26691026 26691337 -113625428 - AluSx SINE Alu 0 312 1 754 185 7 30 chr10 26691349 26691484 -113625281 - FLAM_C SINE Alu -1 132 1 23 0 0 29 chr10 26692559 26692575 -113624190 + AT_rich Low_complexity Low_complexity 1 16 -17 2291 86 7 3 chr10 26692575 26692866 -113623899 + AluSx SINE Alu 1 292 -20 23 0 0 29 chr10 26692866 26692883 -113623882 + AT_rich Low_complexity Low_complexity 16 33 0 593 178 178 7 chr10 26692907 26693059 -113623706 - MIR SINE MIR -1 261 84 642 200 0 0 chr10 26693091 26693196 -113623569 + AluSq/x SINE Alu 3 107 -206 202 192 19 19 chr10 26693216 26693268 -113623497 + (TAA)n Simple_repeat Simple_repeat 2 53 0 879 211 6 6 chr10 26693293 26693459 -113623306 - AluJo SINE Alu -146 166 1 304 346 29 0 chr10 26693462 26693566 -113623199 - MIR SINE MIR -60 148 42 2828 160 20 71 chr10 26693912 26694133 -113622632 + LTR64 LTR ERVK 1 232 -326 1979 114 34 20 chr10 26694133 26694430 -113622335 - AluSx SINE Alu -11 301 1 2828 160 20 71 chr10 26694430 26694796 -113621969 + LTR64 LTR ERVK 232 558 0 558 105 58 0 chr10 26694952 26695038 -113621727 + AluY SINE Alu 204 294 -17 1788 165 3 10 chr10 26695089 26695380 -113621385 + AluJo SINE Alu 1 289 -23 2200 104 4 0 chr10 26695391 26695671 -113621094 + AluSx SINE Alu 6 286 -26 252 269 65 11 chr10 26695837 26695930 -113620835 - L2 LINE L2 -6 3266 3169 1231 167 4 44 chr10 26696279 26696506 -113620259 - AluJo SINE Alu -9 303 86 358 232 29 29 chr10 26696554 26696696 -113620069 + MIR SINE MIR 11 151 -62 525 292 129 10 chr10 26696697 26696906 -113619859 + MIR SINE MIR 21 254 -8 211 363 44 0 chr10 26696918 26697009 -113619756 + MIR SINE MIR 167 261 -1 1508 192 18 59 chr10 26697099 26697437 -113619328 - MLT1D LTR MaLR -1 504 181 1241 87 0 6 chr10 26697446 26697607 -113619158 - AluSp SINE Alu -16 297 138 918 153 41 29 chr10 26697610 26697780 -113618985 - MLT1D LTR MaLR -316 189 18 1811 132 3 53 chr10 26698022 26698325 -113618440 - AluJo SINE Alu -22 290 3 1568 193 33 20 chr10 26698855 26699161 -113617604 + AluJo SINE Alu 1 310 -2 195 42 0 0 chr10 26699181 26699205 -113617560 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 641 165 83 0 chr10 26699208 26699317 -113617448 - FLAM_C SINE Alu -24 119 2 419 236 154 0 chr10 26699693 26699816 -113616949 - MIR SINE MIR -49 213 72 758 154 15 22 chr10 26699818 26699954 -113616811 + AluJb SINE Alu 85 219 -93 407 188 0 0 chr10 26699956 26700025 -113616740 + AluSp/q SINE Alu 190 258 -45 987 123 6 11 chr10 26700049 26700228 -113616537 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 892 129 79 7 chr10 26701162 26701301 -113615464 + FAM SINE Alu 18 166 -19 182 229 83 0 chr10 26701417 26701465 -113615300 + L2 LINE L2 3262 3313 0 1669 155 38 17 chr10 26701495 26701786 -113614979 + AluJo SINE Alu 1 297 -15 2816 196 22 17 chr10 26701795 26702337 -113614428 - MER44D DNA MER2_type 0 605 6 1548 152 168 0 chr10 26702800 26703109 -113613656 + MER46B DNA MER2_type 1 236 0 2113 137 0 0 chr10 26703329 26703629 -113613136 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26703808 26703830 -113612935 + AT_rich Low_complexity Low_complexity 1 22 0 3025 115 31 31 chr10 26703835 26703974 -113612791 - L1MB2 LINE L1 -7 6164 6026 1327 106 125 19 chr10 26703974 26704182 -113612583 + MER30 DNA MER1_type 1 230 0 3025 115 31 31 chr10 26704182 26704519 -113612246 - L1MB2 LINE L1 -144 6027 5688 1784 87 4 0 chr10 26705173 26705404 -113611361 - L1PA8 LINE L1 0 6172 5941 2437 45 0 7 chr10 26706548 26706840 -113609925 - AluY SINE Alu -20 291 2 2037 120 30 7 chr10 26707004 26707304 -113609461 - AluSq SINE Alu -6 307 1 1985 96 11 28 chr10 26707632 26707914 -113608851 - AluSq SINE Alu -5 308 32 304 263 38 0 chr10 26707954 26708034 -113608731 - L2 LINE L2 -5 3267 3185 676 270 58 39 chr10 26708058 26708317 -113608448 + Charlie7 DNA MER1_type 1 264 -2348 1933 112 9 71 chr10 26708342 26708665 -113608100 - AluSx SINE Alu -7 305 3 2558 217 35 68 chr10 26708707 26709192 -113607573 - L1MB8 LINE L1 0 6178 5678 955 32 24 0 chr10 26709192 26709318 -113607447 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 1603 171 16 0 chr10 26709322 26709579 -113607186 - AluSx SINE Alu -51 261 1 2558 217 35 68 chr10 26709579 26710292 -113606473 - L1MB8 LINE L1 -503 5675 5024 1182 106 12 0 chr10 26710340 26710501 -113606264 - AluSg/x SINE Alu -17 295 133 342 253 0 10 chr10 26710501 26710600 -113606165 - L1MB8 LINE L1 -1143 5003 4906 * 3896 236 30 35 chr10 26710593 26711663 -113605102 - L1MB8 LINE L1 -1572 4574 3509 1389 146 172 4 chr10 26711663 26711930 -113604835 - AluJb SINE Alu 0 312 1 3896 236 30 35 chr10 26711930 26712040 -113604725 - L1MB8 LINE L1 -2637 3509 3400 499 106 15 0 chr10 26712045 26712111 -113604654 + AluJ/FLAM SINE Alu 2 68 -244 5965 53 0 7 chr10 26712201 26712212 -113604553 + L1P LINE L1 3042 3052 -3094 5242 69 0 0 chr10 26712212 26712832 -113603933 - L1PA5 LINE L1 -5 6149 5530 5965 53 0 7 chr10 26712832 26713588 -113603177 + L1P LINE L1 3052 3804 -2342 694 244 62 31 chr10 26713585 26713642 -113603123 - L1MB8 LINE L1 -2740 3406 3352 * 786 125 62 47 chr10 26713642 26713770 -113602995 - FLAM_C SINE Alu -3 130 1 694 244 62 31 chr10 26713770 26714036 -113602729 - L1MB8 LINE L1 -2794 3352 3073 5654 193 24 20 chr10 26714071 26715843 -113600922 + L1PBa LINE L1 1 985 -5219 1012 117 7 0 chr10 26715843 26715980 -113600785 + AluSq/x SINE Alu 1 138 -175 10329 187 26 6 chr10 26715982 26718084 -113598681 + L1 LINE L1 2230 4373 -1773 579 85 0 12 chr10 26718087 26718169 -113598596 + L1P5 LINE L1 5447 5527 -624 1876 158 3 3 chr10 26718169 26718460 -113598305 - AluJb SINE Alu -20 292 2 936 156 0 15 chr10 26718481 26718616 -113598149 - FLAM_C SINE Alu 0 133 1 1596 197 44 38 chr10 26718616 26719081 -113597684 - L1MB8 LINE L1 -3061 3085 2615 374 234 219 0 chr10 26719197 26719325 -113597440 - L1MEc LINE L1 -4699 1697 1542 751 236 117 37 chr10 26719349 26719701 -113597064 - L1MEc LINE L1 -5020 1376 997 1962 140 13 0 chr10 26719782 26720082 -113596683 - AluSx SINE Alu -8 304 1 399 256 30 57 chr10 26720198 26720277 -113596488 + L1MEc LINE L1 1515 1544 -963 2453 125 120 5 chr10 26720277 26720661 -113596104 + MSTA LTR MaLR 1 428 0 399 256 30 57 chr10 26720661 26720784 -113595981 + L1MEc LINE L1 1544 1669 -838 1698 176 63 9 chr10 26720790 26721109 -113595656 + MER7A DNA MER2_type 1 334 -12 387 290 105 15 chr10 26721429 26721575 -113595190 + MER5A DNA MER1_type 26 183 -6 1027 212 46 92 chr10 26721619 26721935 -113594830 - MER21B LTR ERV1 -107 809 497 796 230 91 34 chr10 26721934 26722243 -113594522 - MER21B LTR ERV1 -486 377 1 * 2102 140 109 18 chr10 26722306 26722692 -113594073 - MSTA LTR MaLR -2 426 6 417 281 67 28 chr10 26722716 26722894 -113593871 + MIR SINE MIR 14 198 -64 1733 162 3 26 chr10 26722902 26723204 -113593561 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr10 26723572 26723593 -113593172 + AT_rich Low_complexity Low_complexity 1 21 0 223 68 85 0 chr10 26723633 26723692 -113593073 + (TA)n Simple_repeat Simple_repeat 1 64 0 2015 129 28 3 chr10 26723908 26724195 -113592570 - AluSx SINE Alu -18 294 1 606 180 0 0 chr10 26724394 26724494 -113592271 + FLAM_C SINE Alu 32 131 -12 21 0 0 0 chr10 26724494 26724515 -113592250 + AT_rich Low_complexity Low_complexity 1 21 0 1484 252 96 67 chr10 26724543 26724914 -113591851 + MLT1G1 LTR MaLR 2 361 -234 771 198 86 30 chr10 26724914 26725111 -113591654 + MER3 DNA MER1_type 2 209 0 1484 252 96 67 chr10 26725111 26725214 -113591551 + MLT1G1 LTR MaLR 361 460 -135 2239 107 3 0 chr10 26725214 26725513 -113591252 - AluSg SINE Alu -10 300 1 1484 252 96 67 chr10 26725513 26725601 -113591164 + MLT1G1 LTR MaLR 460 581 -14 1661 144 44 44 chr10 26725609 26725907 -113590858 - AluJo SINE Alu -4 308 11 376 256 0 0 chr10 26726325 26726403 -113590362 - MER91A DNA MER1_type -38 158 81 558 108 0 0 chr10 26727479 26727562 -113589203 + (CA)n Simple_repeat Simple_repeat 2 84 0 1730 163 0 18 chr10 26730212 26730495 -113586270 + AluJo SINE Alu 5 282 -30 195 308 55 22 chr10 26731065 26731156 -113585609 + MIR SINE MIR 156 249 -13 444 323 111 0 chr10 26731800 26731989 -113584776 + L3b LINE CR1 1150 1359 -224 1710 133 0 0 chr10 26732070 26732310 -113584455 - AluSx SINE Alu -72 240 1 820 166 83 7 chr10 26732311 26732456 -113584309 - AluJb SINE Alu -24 288 133 794 168 0 0 chr10 26733068 26733187 -113583578 + FLAM_A SINE Alu 13 131 -11 2076 93 41 0 chr10 26733192 26733461 -113583304 + AluSx SINE Alu 6 285 -27 889 238 32 20 chr10 26733745 26733993 -113582772 + MIR SINE MIR 12 262 0 207 0 0 0 chr10 26735134 26735157 -113581608 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1884 156 7 7 chr10 26735370 26735677 -113581088 + AluJo SINE Alu 1 307 -5 2035 144 30 0 chr10 26735698 26735997 -113580768 + AluSx SINE Alu 1 308 -4 1003 103 0 58 chr10 26736004 26736159 -113580606 + FRAM SINE Alu 27 172 -4 2180 120 0 19 chr10 26736160 26736476 -113580289 + AluSx SINE Alu 1 310 -2 2450 107 79 60 chr10 26738872 26739121 -113577644 + MSTA LTR MaLR 1 263 -165 1805 152 50 0 chr10 26739121 26739398 -113577367 - AluSx SINE Alu -21 291 1 2450 107 79 60 chr10 26739398 26739568 -113577197 + MSTA LTR MaLR 263 428 0 514 311 40 0 chr10 26739579 26739730 -113577035 + L2 LINE L2 3111 3267 -5 2288 106 0 3 chr10 26739950 26740251 -113576514 + AluSx SINE Alu 1 300 -12 510 169 38 141 chr10 26741034 26741071 -113575694 - HAL1 LINE L1 -10 2497 2458 1822 145 7 3 chr10 26741071 26741397 -113575368 + AluSx SINE Alu 1 327 0 510 169 38 141 chr10 26741397 26741571 -113575194 - HAL1 LINE L1 -49 2458 2307 760 182 15 8 chr10 26741659 26741791 -113574974 - FLAM_C SINE Alu 0 133 1 24 32 0 0 chr10 26741871 26741902 -113574863 + AT_rich Low_complexity Low_complexity 1 31 0 231 238 286 0 chr10 26742094 26742199 -113574566 - L1MC4 LINE L1 -312 7730 7596 1107 149 52 85 chr10 26742209 26742221 -113574544 + Tigger1 DNA MER2_type 2 13 -2405 1924 119 0 11 chr10 26742221 26742490 -113574275 - AluSx SINE Alu -9 303 38 1107 149 52 85 chr10 26742490 26742725 -113574040 + Tigger1 DNA MER2_type 13 241 -2177 2139 99 7 16 chr10 26742725 26743029 -113573736 - AluSx SINE Alu -7 305 5 3809 106 38 34 chr10 26743032 26743645 -113573120 + Tigger1 DNA MER2_type 1076 1690 -728 636 167 25 7 chr10 26743647 26743885 -113572880 + AluJ SINE Alu 2 301 -11 5103 111 23 8 chr10 26743885 26744615 -113572150 + Tigger1 DNA MER2_type 1678 2418 0 2075 135 0 0 chr10 26744686 26744989 -113571776 + AluSx SINE Alu 1 303 0 203 304 0 0 chr10 26745003 26745059 -113571706 + L2 LINE L2 3257 3312 -1 225 196 0 0 chr10 26745479 26745525 -113571240 + GA-rich Low_complexity Low_complexity 2 47 0 2267 128 0 0 chr10 26745931 26746243 -113570522 + AluSx SINE Alu 1 312 0 448 198 18 30 chr10 26746630 26746797 -113569968 + GA-rich Low_complexity Low_complexity 1 165 0 266 203 0 14 chr10 26746842 26746911 -113569854 + GA-rich Low_complexity Low_complexity 2 69 0 1981 132 42 3 chr10 26747656 26747945 -113568820 - AluSx SINE Alu -12 300 1 864 195 11 74 chr10 26748369 26748559 -113568206 - AluJo SINE Alu -84 228 51 1354 166 40 8 chr10 26748749 26748996 -113567769 - L1MA4A LINE L1 0 6303 6049 1814 159 7 7 chr10 26749970 26750259 -113566506 - AluJo SINE Alu -23 289 1 2021 104 4 0 chr10 26750675 26750943 -113565822 + AluSx SINE Alu 35 303 -9 228 297 11 11 chr10 26752559 26752650 -113564115 + L1MC4 LINE L1 6613 6703 -1339 1695 166 6 56 chr10 26752659 26752978 -113563787 - AluJo SINE Alu -9 303 1 292 187 75 84 chr10 26753490 26753597 -113563168 + MLT1K LTR MaLR 461 566 -22 1135 143 0 11 chr10 26753752 26753927 -113562838 - FRAM SINE Alu -6 170 1 2447 159 39 14 chr10 26754591 26754624 -113562141 - L1MA6 LINE L1 -4 6296 6265 2688 121 3 18 chr10 26754624 26755005 -113561760 + THE1C LTR MaLR 1 375 0 2447 159 39 14 chr10 26755005 26755412 -113561353 - L1MA6 LINE L1 -35 6265 5845 984 182 0 12 chr10 26755699 26755869 -113560896 - FRAM SINE Alu -7 169 2 746 150 0 17 chr10 26755948 26756068 -113560697 + FLAM_C SINE Alu 2 119 -24 180 0 0 0 chr10 26756068 26756088 -113560677 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 383 284 21 0 chr10 26756138 26756233 -113560532 + MIR SINE MIR 158 254 -8 2229 110 0 0 chr10 26756264 26756554 -113560211 + AluSg SINE Alu 1 290 -20 612 175 0 0 chr10 26756564 26756661 -113560104 - FLAM_A SINE Alu -8 134 38 274 242 125 47 chr10 26756807 26756935 -113559830 - HAL1 LINE L1 -2112 395 258 819 204 25 13 chr10 26757026 26757183 -113559582 - AluJo SINE Alu -152 160 2 2055 148 0 0 chr10 26757474 26757771 -113558994 - AluSx SINE Alu -15 297 1 307 222 14 0 chr10 26757775 26757847 -113558918 - MIR SINE MIR -101 161 89 681 103 93 0 chr10 26757849 26757946 -113558819 + AluSq/x SINE Alu 1 106 -207 2260 93 0 13 chr10 26759159 26759460 -113557305 - AluSq SINE Alu -16 297 1 485 139 25 13 chr10 26759535 26759614 -113557151 + MADE1 DNA Mariner 1 80 0 809 265 31 27 chr10 26759793 26760016 -113556749 + MIR SINE MIR 25 248 -14 1391 109 27 50 chr10 26760053 26760274 -113556491 - AluSg/x SINE Alu 0 312 97 1021 86 17 11 chr10 26760626 26760800 -113555965 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1489 178 19 11 chr10 26760809 26761146 -113555619 - AluJo SINE Alu 0 375 37 248 275 18 128 chr10 26761680 26761738 -113555027 + L2 LINE L2 2963 3005 -267 2271 107 7 0 chr10 26761738 26762047 -113554718 + AluSx SINE Alu 2 312 0 248 275 18 128 chr10 26762047 26762097 -113554668 + L2 LINE L2 3005 3059 -213 971 131 0 0 chr10 26762484 26762614 -113554151 - FLAM_A SINE Alu 0 133 4 335 181 44 0 chr10 26762808 26762968 -113553797 + (TA)n Simple_repeat Simple_repeat 2 168 0 21 36 0 0 chr10 26764807 26764835 -113551930 + AT_rich Low_complexity Low_complexity 1 28 0 1651 147 11 26 chr10 26765506 26765772 -113550993 + AluJo SINE Alu 24 285 -27 2158 119 0 28 chr10 26766955 26767273 -113549492 + AluSq SINE Alu 1 309 -4 505 202 23 31 chr10 26767383 26767512 -113549253 + L1ME3A LINE L1 6038 6165 -5 252 254 62 54 chr10 26767561 26767691 -113549074 - MIR3 SINE MIR -37 171 41 1256 169 153 8 chr10 26767744 26767882 -113548883 - AluJo SINE Alu -13 299 182 216 0 0 0 chr10 26767882 26767906 -113548859 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1256 169 153 8 chr10 26767906 26768028 -113548737 - AluJo SINE Alu -130 182 1 297 0 0 0 chr10 26768301 26768334 -113548431 + (CA)n Simple_repeat Simple_repeat 2 34 0 212 360 51 23 chr10 26768880 26769055 -113547710 + L2 LINE L2 2173 2352 -962 1593 194 0 20 chr10 26769064 26769357 -113547408 + AluJb SINE Alu 1 287 -25 2073 119 30 0 chr10 26769357 26769652 -113547113 - AluSc SINE Alu -5 304 1 1646 102 16 0 chr10 26769874 26770120 -113546645 - L1MA3 LINE L1 -232 6073 5824 872 209 0 6 chr10 26771088 26771260 -113545505 + AluJo SINE Alu 123 293 -19 2234 115 0 3 chr10 26771350 26771646 -113545119 + AluSx SINE Alu 1 295 -17 931 132 0 183 chr10 26772614 26772849 -113543916 - 7SK RNA RNA -1 192 1 265 293 40 0 chr10 26772975 26773050 -113543715 + MIR SINE MIR 89 166 -96 1375 209 54 7 chr10 26773050 26773327 -113543438 + AluJo SINE Alu 1 290 -22 315 384 20 20 chr10 26773455 26773601 -113543164 + L2 LINE L2 3127 3272 0 2041 129 0 32 chr10 26773906 26774215 -113542550 + AluSx SINE Alu 1 299 -13 180 320 142 41 chr10 26774351 26774548 -113542217 + MIR SINE MIR 37 253 -9 191 260 20 0 chr10 26774882 26774932 -113541833 - MIR SINE MIR -115 147 97 305 217 0 0 chr10 26774944 26775004 -113541761 - AluJb SINE Alu -78 224 165 378 224 112 43 chr10 26775108 26775130 -113541635 - L1MA10 LINE L1 -1 6333 6312 3028 236 32 47 chr10 26775130 26775622 -113541143 - L1ME1 LINE L1 -9 6157 5659 2259 125 0 0 chr10 26775622 26775933 -113540832 + AluY SINE Alu 1 311 0 3028 236 32 47 chr10 26775933 26776024 -113540741 - L1ME1 LINE L1 -507 5659 5568 2250 132 0 0 chr10 26776024 26776335 -113540430 + AluSx SINE Alu 2 312 0 3028 236 32 47 chr10 26776335 26776720 -113540045 - L1ME1 LINE L1 -598 5568 5209 1013 202 149 10 chr10 26776725 26777027 -113539738 + L2 LINE L2 2447 2790 -524 292 320 64 74 chr10 26778927 26778990 -113537775 - MIR SINE MIR -39 223 161 1092 123 0 0 chr10 26778990 26779145 -113537620 + L1PA16 LINE L1 6010 6164 -2 292 320 64 74 chr10 26779145 26779284 -113537481 - MIR SINE MIR -101 161 23 2973 259 118 20 chr10 26779643 26780847 -113535918 + L2 LINE L2 1881 3206 -107 459 274 85 57 chr10 26781027 26781275 -113535490 - MLT1L LTR MaLR -134 481 227 472 300 106 82 chr10 26781415 26782101 -113534664 - HAL1 LINE L1 -1425 1082 380 247 48 24 24 chr10 26782361 26782403 -113534362 + (CATAT)n Simple_repeat Simple_repeat 2 43 0 1609 191 14 0 chr10 26782445 26782750 -113534015 - AluJo SINE Alu 0 309 1 341 280 9 0 chr10 26782790 26782897 -113533868 - MIR3 SINE MIR -10 198 91 490 227 67 0 chr10 26783014 26783164 -113533601 + MIR SINE MIR 103 262 0 4187 106 18 3 chr10 26783258 26784309 -113532456 + L1PA10 LINE L1 4731 5789 -379 189 229 0 0 chr10 26784309 26784357 -113532408 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 2809 108 11 0 chr10 26784357 26784729 -113532036 + L1PA10 LINE L1 5782 6157 -11 2143 120 20 7 chr10 26786403 26786704 -113530061 + THE1B LTR MaLR 1 305 -59 9926 147 27 25 chr10 26786713 26788429 -113528336 + L1P LINE L1 11 1730 -4416 6996 45 9 7 chr10 26788531 26789401 -113527364 + L1PA6 LINE L1 5282 6153 -1 548 82 0 0 chr10 26789401 26789474 -113527291 + THE1B LTR MaLR 292 364 0 449 278 151 28 chr10 26790011 26790223 -113526542 + MIR SINE MIR 25 262 0 1708 123 112 0 chr10 26790306 26790566 -113526199 - AluSx SINE Alu -23 289 1 2286 107 0 7 chr10 26791499 26791798 -113524967 - AluSc SINE Alu -11 298 2 626 200 91 30 chr10 26791911 26792076 -113524689 + MER104 DNA Tc2 6 180 0 215 274 0 27 chr10 26792097 26792170 -113524595 + T-rich Low_complexity Low_complexity 4 74 0 344 158 0 0 chr10 26792359 26792416 -113524349 - Alu SINE Alu 0 301 245 2221 60 0 14 chr10 26792539 26792823 -113523942 + AluY SINE Alu 32 311 0 736 184 0 8 chr10 26793681 26793806 -113522959 + FRAM SINE Alu 23 146 -30 255 103 0 0 chr10 26793809 26793848 -113522917 + (CA)n Simple_repeat Simple_repeat 2 40 0 334 335 33 7 chr10 26794372 26794524 -113522241 + MIR SINE MIR 13 168 -94 7067 233 80 23 chr10 26794738 26797446 -113519319 + L1ME1 LINE L1 2715 5602 -564 2244 124 3 0 chr10 26797446 26797745 -113519020 - AluSx SINE Alu -12 300 1 7067 233 80 23 chr10 26797745 26797960 -113518805 + L1ME1 LINE L1 5602 5803 -363 566 60 0 12 chr10 26797967 26798051 -113518714 + (GAA)n Simple_repeat Simple_repeat 2 84 0 3417 123 35 10 chr10 26798058 26798656 -113518109 + MER4B LTR ERV1 1 779 0 1009 231 86 25 chr10 26798656 26798982 -113517783 + L1ME1 LINE L1 5834 6334 0 1312 221 132 72 chr10 26799283 26799855 -113516910 + MLT1E1 LTR MaLR 1 654 0 1569 180 14 24 chr10 26800042 26800336 -113516429 - AluJo SINE Alu -19 293 3 1253 100 0 0 chr10 26801308 26801468 -113515297 - AluSg/x SINE Alu -10 300 141 1279 189 142 12 chr10 26802074 26802397 -113514368 - MLT1A1 LTR MaLR 0 365 1 358 322 63 21 chr10 26802438 26802581 -113514184 + MLT1K LTR MaLR 190 338 -250 1929 137 3 45 chr10 26802711 26803024 -113513741 - AluJb SINE Alu -12 300 1 264 318 0 0 chr10 26803045 26803108 -113513657 + MLT1K LTR MaLR 518 580 -8 514 311 69 49 chr10 26803139 26803547 -113513218 - L1ME4a LINE L1 -295 5826 5411 1640 201 14 0 chr10 26803968 26804262 -113512503 - AluJo SINE Alu -11 301 4 815 137 0 0 chr10 26804264 26804381 -113512384 - AluJo SINE Alu -176 136 20 2074 140 6 26 chr10 26804747 26805090 -113511675 - MER1B DNA MER1_type -1 336 1 259 118 0 0 chr10 26805462 26805513 -113511252 - LTR66 LTR ERVL -169 441 391 2262 110 10 0 chr10 26805642 26805943 -113510822 + AluSp SINE Alu 1 304 -9 354 282 51 8 chr10 26806336 26806453 -113510312 - MIR SINE MIR -140 122 1 2206 104 7 3 chr10 26806833 26807142 -113509623 - AluSg SINE Alu 0 310 1 307 261 97 37 chr10 26807341 26807475 -113509290 + MIR SINE MIR 3 144 -118 1423 202 52 0 chr10 26807585 26807699 -113509066 + AluJo SINE Alu 1 108 -204 191 30 0 61 chr10 26807699 26807732 -113509033 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1423 202 52 0 chr10 26807732 26807904 -113508861 + AluJo SINE Alu 108 302 -10 267 31 0 0 chr10 26807904 26807936 -113508829 + (GA)n Simple_repeat Simple_repeat 1 32 0 227 171 0 0 chr10 26808615 26808656 -113508109 - L1 LINE L1 -1503 4643 4603 * 2663 136 77 30 chr10 26808654 26808906 -113507859 + L1MA6 LINE L1 5362 5601 -699 843 181 0 0 chr10 26808906 26809039 -113507726 + FLAM_C SINE Alu 1 133 0 2663 136 77 30 chr10 26809039 26809280 -113507485 + L1MA6 LINE L1 5601 5878 -422 926 234 19 10 chr10 26809277 26809407 -113507358 - L1MEc LINE L1 -6150 246 112 * 1443 156 116 7 chr10 26809407 26809682 -113507083 - AluJo SINE Alu -7 305 1 926 234 19 10 chr10 26809682 26809760 -113507005 - L1MEc LINE L1 -6284 112 36 1610 121 42 170 chr10 26811767 26812196 -113504569 - MLT1A2 LTR MaLR 0 374 1 270 274 47 9 chr10 26812768 26812874 -113503891 - MIR SINE MIR -50 212 103 1117 192 220 0 chr10 26813020 26813265 -113503500 + AluJo SINE Alu 1 299 -3 2311 98 37 40 chr10 26813533 26813909 -113502856 - THE1C LTR MaLR 0 375 1 2972 9 0 0 chr10 26813923 26814239 -113502526 + AluYb8 SINE Alu 1 316 -2 284 185 0 15 chr10 26814340 26814405 -113502360 + MER5A DNA MER1_type 4 67 -122 1066 147 0 0 chr10 26814409 26814559 -113502206 + FRAM SINE Alu 1 142 -34 192 204 0 0 chr10 26814582 26814631 -113502134 + MER5A DNA MER1_type 61 109 -80 261 145 162 156 chr10 26814794 26814884 -113501881 + MIR SINE MIR 71 159 -103 3704 151 45 17 chr10 26814884 26815488 -113501277 - L1MC1 LINE L1 -1 6332 5705 2128 128 3 0 chr10 26815488 26815777 -113500988 + AluSx SINE Alu 1 290 -22 3704 151 45 17 chr10 26815777 26815866 -113500899 - L1MC1 LINE L1 -628 5705 5620 261 145 162 156 chr10 26815866 26815954 -113500811 + MIR SINE MIR 159 250 -12 385 231 13 0 chr10 26815965 26816043 -113500722 - MER115 DNA AcHobo 0 693 615 595 203 36 0 chr10 26817093 26817231 -113499534 + L1MB8 LINE L1 5625 5767 -399 477 224 87 43 chr10 26817296 26817457 -113499308 + L1MB8 LINE L1 5992 6159 -19 264 30 0 0 chr10 26817457 26817490 -113499275 + (TG)n Simple_repeat Simple_repeat 2 34 0 1810 161 3 7 chr10 26817490 26817775 -113498990 - AluJb SINE Alu -28 284 1 439 246 15 52 chr10 26817793 26817927 -113498838 - FLAM_C SINE Alu -3 130 2 301 362 9 0 chr10 26817950 26818055 -113498710 + MER5A DNA MER1_type 63 168 -21 22 0 0 0 chr10 26818113 26818135 -113498630 + AT_rich Low_complexity Low_complexity 1 22 0 244 208 7 174 chr10 26818279 26818428 -113498337 + MER103 DNA DNA 42 165 -1 2035 147 0 16 chr10 26819060 26819367 -113497398 - AluSx SINE Alu -10 302 1 47 19 0 0 chr10 26819458 26819512 -113497253 + AT_rich Low_complexity Low_complexity 1 54 0 1722 176 3 19 chr10 26819961 26820274 -113496491 - AluJb SINE Alu -4 308 1 747 259 84 32 chr10 26820670 26820924 -113495841 + L2 LINE L2 2450 2689 -624 1897 160 3 10 chr10 26820924 26821230 -113495535 + AluJo SINE Alu 1 304 -8 747 259 84 32 chr10 26821230 26821552 -113495213 + L2 LINE L2 2689 3056 -257 1710 171 3 17 chr10 26821887 26822179 -113494586 - AluJo SINE Alu -24 288 1 320 331 95 6 chr10 26822624 26822793 -113493972 + MIR SINE MIR 52 235 -27 481 267 152 9 chr10 26822944 26823161 -113493604 + MIR SINE MIR 12 259 -3 1850 172 7 13 chr10 26823276 26823578 -113493187 + AluJb SINE Alu 1 300 -12 577 195 16 0 chr10 26825360 26825483 -113491282 + MIR SINE MIR 51 175 -87 1869 142 25 0 chr10 26825523 26825804 -113490961 - AluJb SINE Alu -24 288 1 1707 172 21 0 chr10 26826129 26826455 -113490310 - AluSq SINE Alu 0 332 1 1676 112 0 25 chr10 26826664 26826906 -113489859 - MER46A DNA MER2_type 0 236 1 297 337 97 48 chr10 26826959 26827401 -113489364 + L2 LINE L2 1896 2359 -955 539 255 131 25 chr10 26827541 26827855 -113488910 + L2 LINE L2 2967 3313 0 237 178 0 0 chr10 26829075 26829120 -113487645 + G-rich Low_complexity Low_complexity 2 46 0 27 0 0 0 chr10 26829121 26829148 -113487617 + GC_rich Low_complexity Low_complexity 1 27 0 201 206 0 48 chr10 26829278 26829341 -113487424 + (CCG)n Simple_repeat Simple_repeat 2 61 0 221 267 9 0 chr10 26829579 26829695 -113487070 + (CACCT)n Simple_repeat Simple_repeat 1 117 0 185 241 35 17 chr10 26830616 26830674 -113486091 - MER5A DNA MER1_type -9 180 122 2372 101 122 10 chr10 26831379 26831764 -113485001 - MSTA LTR MaLR 0 428 1 1631 190 0 7 chr10 26832081 26832365 -113484400 + AluJo SINE Alu 1 282 -30 180 0 0 0 chr10 26832373 26832393 -113484372 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1230 135 16 0 chr10 26832551 26832736 -113484029 - L1PA15 LINE L1 0 6165 5978 213 218 0 0 chr10 26832875 26832930 -113483835 + T-rich Low_complexity Low_complexity 1 55 0 2841 130 4 30 chr10 26832932 26833162 -113483603 - L1MA6 LINE L1 0 6300 6066 1956 153 24 12 chr10 26833162 26833495 -113483270 + MER1B DNA MER1_type 1 337 0 2841 130 4 30 chr10 26833495 26833763 -113483002 - L1MA6 LINE L1 -234 6066 5815 925 201 0 34 chr10 26833764 26833883 -113482882 - L1 LINE L1 -1039 5107 4995 2133 117 0 0 chr10 26833883 26834191 -113482574 - AluSx SINE Alu 0 308 1 925 201 0 34 chr10 26834191 26834274 -113482491 - L1 LINE L1 -1151 4995 4911 420 282 0 67 chr10 26835946 26836095 -113480670 + MER103 DNA DNA 16 154 -12 1940 117 3 77 chr10 26836836 26837160 -113479605 - AluSx SINE Alu -12 300 1 982 110 0 22 chr10 26837162 26837298 -113479467 - AluJo/FLAM SINE Alu -169 133 1 514 266 142 19 chr10 26837657 26837924 -113478841 - L1ME4a LINE L1 -248 5873 5574 603 286 28 11 chr10 26838231 26838409 -113478356 + MIR SINE MIR 37 217 -45 751 229 57 17 chr10 26840407 26840582 -113476183 - MER20 DNA MER1_type 0 219 38 1730 179 10 3 chr10 26841189 26841486 -113475279 + AluJb SINE Alu 1 299 -13 286 245 107 68 chr10 26841543 26841691 -113475074 + MIR SINE MIR 36 186 -63 233 342 13 0 chr10 26842038 26842117 -113474648 - L3 LINE CR1 -120 1457 1378 636 254 68 0 chr10 26843150 26843327 -113473438 + MIR SINE MIR 74 262 0 336 175 0 0 chr10 26843569 26843632 -113473133 + (TG)n Simple_repeat Simple_repeat 1 63 0 474 193 0 48 chr10 26844046 26844233 -113472532 + (TG)n Simple_repeat Simple_repeat 1 178 0 787 124 5 38 chr10 26844253 26844438 -113472327 + (TG)n Simple_repeat Simple_repeat 2 180 0 2108 136 0 0 chr10 26845289 26845597 -113471168 - AluSx SINE Alu -4 308 1 1896 146 3 23 chr10 26846835 26847136 -113469629 + AluJo SINE Alu 5 299 -13 2235 100 0 10 chr10 26847144 26847445 -113469320 + AluSx SINE Alu 1 298 -14 384 264 65 68 chr10 26847456 26847738 -113469027 + L1MB8 LINE L1 637 1122 -6341 273 304 39 20 chr10 26848088 26848190 -113468575 + L1MB8 LINE L1 1704 1807 -5656 2078 232 60 30 chr10 26848214 26848267 -113468498 + L1MB8 LINE L1 3407 3457 -4128 1870 122 0 0 chr10 26848267 26848521 -113468244 + AluSq SINE Alu 49 302 -11 2078 232 60 30 chr10 26848521 26848723 -113468042 + L1MB8 LINE L1 3457 3652 -3933 2222 114 0 3 chr10 26848723 26849022 -113467743 + AluSx SINE Alu 13 310 -2 2078 232 60 30 chr10 26849022 26850011 -113466754 + L1MB8 LINE L1 3652 7186 -399 482 235 116 39 chr10 26850016 26850237 -113466528 + L1MB8 LINE L1 7324 7578 -18 246 32 0 0 chr10 26850237 26850268 -113466497 + (TG)n Simple_repeat Simple_repeat 2 32 0 827 156 16 8 chr10 26850268 26850396 -113466369 - AluJb SINE Alu -28 284 156 24 0 0 0 chr10 26850745 26850769 -113465996 + AT_rich Low_complexity Low_complexity 1 24 0 441 0 0 0 chr10 26851271 26851320 -113465445 + (TG)n Simple_repeat Simple_repeat 2 50 0 496 259 26 0 chr10 26852447 26852563 -113464202 + MER45A DNA AcHobo 58 176 -2 1159 173 5 36 chr10 26852713 26852933 -113463832 + AluJo SINE Alu 81 293 -19 295 176 0 27 chr10 26852933 26853007 -113463758 + GA-rich Low_complexity Low_complexity 3 74 0 192 77 0 0 chr10 26853020 26853046 -113463719 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr10 26854427 26854448 -113462317 + AT_rich Low_complexity Low_complexity 1 21 0 379 235 0 31 chr10 26854455 26854553 -113462212 + L1MA10 LINE L1 6240 6334 0 1268 199 8 4 chr10 26854640 26854876 -113461889 + AluJb SINE Alu 49 285 -27 297 211 79 13 chr10 26855033 26855109 -113461656 + MIR SINE MIR 103 183 -79 2278 68 0 0 chr10 26855586 26855904 -113460861 - AluY SINE Alu 0 318 1 224 95 48 16 chr10 26856138 26856201 -113460564 + (TA)n Simple_repeat Simple_repeat 1 65 0 5525 34 8 0 chr10 26856819 26857436 -113459329 + L1PA4 LINE L1 5531 6152 -3 242 317 250 0 chr10 26857601 26857765 -113459000 + L3 LINE CR1 400 604 -973 2689 118 17 0 chr10 26857786 26858142 -113458623 + THE1B LTR MaLR 1 362 -2 3280 95 0 0 chr10 26858144 26858574 -113458191 + THE1B-int LTR MaLR 1 430 -1150 6493 20 0 0 chr10 26858614 26859310 -113457455 - L1PA3 LINE L1 0 6155 5460 236 233 14 0 chr10 26859450 26859523 -113457242 + GA-rich Low_complexity Low_complexity 3 76 0 229 292 0 5 chr10 26860289 26860419 -113456346 + MIR SINE MIR 53 236 -26 847 152 0 0 chr10 26860592 26860717 -113456048 - FLAM_C SINE Alu -18 125 1 1191 274 87 19 chr10 26860963 26861342 -113455423 - MLT1I LTR MaLR -4 405 1 501 267 124 40 chr10 26861345 26861570 -113455195 + L2 LINE L2 3020 3263 -50 3083 135 45 97 chr10 26861687 26862347 -113454418 - LTR1 LTR ERV1 0 785 160 1935 125 11 21 chr10 26862628 26862915 -113453850 - AluSx SINE Alu -26 286 3 351 242 21 21 chr10 26864339 26864434 -113452331 + L2 LINE L2 3167 3261 -11 205 162 0 0 chr10 26864440 26864477 -113452288 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 591 15 0 0 chr10 26865001 26865069 -113451696 + (TA)n Simple_repeat Simple_repeat 2 69 0 30 69 0 0 chr10 26865246 26865304 -113451461 + AT_rich Low_complexity Low_complexity 1 58 0 1032 133 0 0 chr10 26865306 26865486 -113451279 + (TA)n Simple_repeat Simple_repeat 1 180 0 2017 143 0 10 chr10 26865496 26865790 -113450975 - AluSx SINE Alu -21 291 1 241 277 213 0 chr10 26865820 26865914 -113450851 - L2 LINE L2 -1 3312 3199 230 158 0 0 chr10 26866055 26866093 -113450672 - LTR33 LTR ERVL -4 517 480 523 140 21 11 chr10 26866112 26866205 -113450560 - AluJ/FRAM SINE Alu 0 312 219 842 130 0 15 chr10 26866229 26866360 -113450405 - FLAM_C SINE Alu 0 143 15 591 246 34 29 chr10 26866367 26866542 -113450223 - LTR33 LTR ERVL -51 470 295 1915 102 4 0 chr10 26866966 26867220 -113449545 - AluSq SINE Alu -58 255 1 251 307 0 40 chr10 26867326 26867401 -113449364 + L2 LINE L2 3203 3274 -39 882 204 11 34 chr10 26867463 26867639 -113449126 + FRAM SINE Alu 1 172 -4 1944 152 0 20 chr10 26868500 26868802 -113447963 - AluJo SINE Alu -16 296 1 275 319 0 0 chr10 26869664 26869736 -113447029 + L2 LINE L2 3234 3305 -8 242 336 89 53 chr10 26870545 26870639 -113446126 + L2 LINE L2 2826 2915 -357 2153 111 3 7 chr10 26870639 26870945 -113445820 - AluSc SINE Alu -4 305 1 1710 171 17 14 chr10 26870945 26871238 -113445527 - AluJo SINE Alu -18 294 1 242 336 89 53 chr10 26871238 26871558 -113445207 + L2 LINE L2 2914 3256 -16 846 125 8 16 chr10 26872173 26872301 -113444464 - FLAM_C SINE Alu -2 131 5 1969 131 34 0 chr10 26872656 26872954 -113443811 - AluSx SINE Alu -4 308 1 2717 126 41 7 chr10 26873030 26873444 -113443321 + MSTA LTR MaLR 1 428 0 346 323 31 8 chr10 26873776 26873906 -113442859 - L3 LINE CR1 -7 1570 1438 889 123 7 45 chr10 26873908 26874062 -113442703 + LTR39 LTR ERV1 3 150 -633 304 107 107 0 chr10 26874070 26874126 -113442639 + L1PA10 LINE L1 6106 6167 -1 3127 181 36 34 chr10 26874179 26874528 -113442237 + LTR39 LTR ERV1 143 495 -288 2152 109 10 0 chr10 26874528 26874822 -113441943 + AluSq SINE Alu 1 297 -16 3127 181 36 34 chr10 26874822 26875112 -113441653 + LTR39 LTR ERV1 495 783 0 2029 134 3 10 chr10 26875299 26875589 -113441176 + AluSx SINE Alu 3 290 -22 1413 148 27 0 chr10 26877090 26877313 -113439452 + AluJo SINE Alu 1 229 -83 349 257 182 7 chr10 26877508 26877656 -113439109 + L2 LINE L2 3140 3313 0 223 287 191 7 chr10 26877757 26877893 -113438872 + L3 LINE CR1 1310 1470 -107 1953 120 16 35 chr10 26879811 26880127 -113436638 + AluSx SINE Alu 1 310 -2 255 329 0 0 chr10 26881238 26881320 -113435445 + (TG)n Simple_repeat Simple_repeat 2 83 0 241 286 34 122 chr10 26881418 26881744 -113435021 + L3 LINE CR1 1192 1540 -37 2242 113 7 0 chr10 26882206 26882508 -113434257 - AluSx SINE Alu -8 304 1 271 295 225 0 chr10 26882523 26882652 -113434113 - MIR SINE MIR -56 206 49 574 259 30 8 chr10 26883285 26883416 -113433349 + MIR SINE MIR 21 154 -108 233 214 0 0 chr10 26883470 26883512 -113433253 + (ATG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 26883930 26883952 -113432813 + (T)n Simple_repeat Simple_repeat 1 22 0 335 325 22 51 chr10 26884368 26884523 -113432242 + MIR SINE MIR 4 151 -103 1750 168 28 0 chr10 26884523 26884814 -113431951 + AluJo SINE Alu 1 299 -13 335 325 22 51 chr10 26884814 26884855 -113431910 + MIR SINE MIR 151 192 -62 1007 64 6 19 chr10 26884894 26885050 -113431715 + (GAAA)n Simple_repeat Simple_repeat 2 155 0 2276 107 0 3 chr10 26885060 26885359 -113431406 - AluSq SINE Alu -15 298 1 254 196 0 0 chr10 26885391 26885437 -113431328 + L1ME4a LINE L1 6073 6118 -3 23 0 0 0 chr10 26885637 26885660 -113431105 + AT_rich Low_complexity Low_complexity 1 23 0 395 300 0 8 chr10 26885699 26885829 -113430936 + L1ME LINE L1 5657 5785 -336 2300 151 25 3 chr10 26885947 26886339 -113430426 + L1MA7 LINE L1 5891 6291 0 2156 112 31 0 chr10 26886433 26886727 -113430038 + AluSq SINE Alu 5 307 -6 1554 141 51 33 chr10 26886727 26887002 -113429763 - AluJo SINE Alu -31 281 1 23 0 0 0 chr10 26887099 26887122 -113429643 + AT_rich Low_complexity Low_complexity 1 23 0 2671 128 31 0 chr10 26887744 26888157 -113428608 + MSTA LTR MaLR 1 426 -2 2564 101 20 0 chr10 26888852 26889209 -113427556 + THE1B LTR MaLR 1 364 0 2473 127 61 20 chr10 26889229 26889638 -113427127 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr10 26889665 26889687 -113427078 + AT_rich Low_complexity Low_complexity 1 22 0 2312 105 14 0 chr10 26889696 26889992 -113426773 - AluSx SINE Alu -12 300 1 320 282 0 0 chr10 26890164 26890242 -113426523 + L2 LINE L2 3222 3299 -14 653 268 110 13 chr10 26890274 26890502 -113426263 - MIR SINE MIR -8 254 5 578 257 57 23 chr10 26892828 26893003 -113423762 - MIR SINE MIR -51 211 31 789 316 18 34 chr10 26894252 26894695 -113422070 + L1ME LINE L1 10 445 -5625 1920 158 0 0 chr10 26894805 26895111 -113421654 + AluJo SINE Alu 5 310 0 913 308 53 31 chr10 26895207 26896025 -113420740 + L1ME LINE L1 525 1360 -4901 22 0 0 0 chr10 26896098 26896120 -113420645 + AT_rich Low_complexity Low_complexity 1 22 0 533 291 76 0 chr10 26896402 26896612 -113420153 - L1MC4 LINE L1 -178 7864 7639 765 182 44 19 chr10 26896631 26896790 -113419975 - FRAM SINE Alu -13 163 1 2035 96 0 22 chr10 26896903 26897174 -113419591 + AluSq SINE Alu 1 265 -48 1595 219 63 34 chr10 26897194 26897701 -113419064 - L1MC4 LINE L1 0 8042 7521 1358 242 34 49 chr10 26897699 26898286 -113418479 + L1MDa LINE L1 1259 1836 -4704 * 405 311 80 0 chr10 26898311 26898597 -113418168 + L1ME4a LINE L1 5589 5897 -224 2319 54 13 10 chr10 26898828 26899126 -113417639 + AluY SINE Alu 1 299 -12 952 263 86 42 chr10 26899142 26899547 -113417218 + MLT1H LTR MaLR 1 386 -169 655 11 122 0 chr10 26899547 26899637 -113417128 - L1PA5 LINE L1 0 6154 6054 952 263 86 42 chr10 26899637 26899815 -113416950 + MLT1H LTR MaLR 386 555 0 1889 141 3 7 chr10 26899910 26900200 -113416565 - AluJb SINE Alu -23 289 1 313 301 201 24 chr10 26902084 26902333 -113414432 + L2 LINE L2 2476 2768 -546 2123 128 45 31 chr10 26903030 26903389 -113413376 - THE1B LTR MaLR 0 364 1 2253 118 0 0 chr10 26903925 26904222 -113412543 - AluSp SINE Alu -13 300 4 491 224 109 0 chr10 26904945 26905110 -113411655 + MER63 DNA MER1_type 112 294 -767 409 62 31 0 chr10 26905232 26905297 -113411468 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 207 100 0 0 chr10 26905296 26905326 -113411439 + (CATA)n Simple_repeat Simple_repeat 4 33 0 * 275 255 117 7 chr10 26905549 26905694 -113411071 + MER103 DNA DNA 3 163 -3 1663 161 62 0 chr10 26905694 26905985 -113410780 - AluJo SINE Alu -3 309 1 412 292 41 23 chr10 26906112 26906283 -113410482 - LTR67 LTR ERVL 0 557 384 840 286 103 81 chr10 26906294 26907150 -113409615 + HAL1 LINE L1 62 950 -1557 744 206 0 0 chr10 26907150 26907281 -113409484 + FLAM_C SINE Alu 2 132 -1 840 286 103 81 chr10 26907281 26907540 -113409225 + HAL1 LINE L1 950 1202 -1305 403 229 136 0 chr10 26907541 26907659 -113409106 - MLT1H LTR MaLR 0 555 422 522 275 40 7 chr10 26907793 26907942 -113408823 - MLT1H LTR MaLR -321 228 75 2100 134 7 0 chr10 26907987 26908286 -113408479 - AluSx SINE Alu -11 301 1 1374 242 48 88 chr10 26908322 26909094 -113407671 + HAL1 LINE L1 1200 1940 -567 405 291 85 0 chr10 26910036 26910235 -113406530 + L1ME3A LINE L1 5742 5957 -213 464 348 103 32 chr10 26910415 26910921 -113405844 - L2 LINE L2 -1482 1832 1291 237 326 21 57 chr10 26910948 26911089 -113405676 + L2 LINE L2 2925 3060 -212 1627 121 158 4 chr10 26911251 26911516 -113405249 - AluSx SINE Alu -6 306 1 1226 102 0 6 chr10 26911568 26911734 -113405031 - AluSp SINE Alu -14 299 135 2062 119 0 10 chr10 26911735 26912045 -113404720 - AluSx SINE Alu 0 312 6 23 54 0 0 chr10 26912261 26912298 -113404467 + AT_rich Low_complexity Low_complexity 1 37 0 1727 144 0 0 chr10 26912944 26913187 -113403578 + AluSx SINE Alu 1 243 -69 1702 141 99 0 chr10 26918366 26918628 -113398137 - AluJb SINE Alu -14 298 11 216 130 0 0 chr10 26918839 26918885 -113397880 + (TA)n Simple_repeat Simple_repeat 2 47 0 282 339 141 17 chr10 26919125 26919423 -113397342 + L3 LINE CR1 371 705 -872 808 154 28 0 chr10 26919443 26919586 -113397179 + MER2 DNA MER2_type 55 201 -144 1784 147 0 4 chr10 26919634 26919906 -113396859 - AluJb SINE Alu -15 297 27 180 0 0 0 chr10 26920223 26920243 -113396522 + (A)n Simple_repeat Simple_repeat 1 20 0 751 229 18 70 chr10 26920306 26920533 -113396232 + MER58A DNA MER1_type 10 224 0 23 33 0 0 chr10 26923121 26923151 -113393614 + AT_rich Low_complexity Low_complexity 1 30 0 235 301 68 0 chr10 26923953 26924026 -113392739 + MIR3 SINE MIR 124 201 -7 202 351 0 0 chr10 26924406 26924463 -113392302 - L2 LINE L2 -1 3271 3215 544 263 239 70 chr10 26924883 26924936 -113391829 - L3 LINE CR1 -392 1185 1142 2123 121 3 7 chr10 26924936 26925243 -113391522 - AluSq SINE Alu -7 306 1 544 263 239 70 chr10 26925243 26925646 -113391119 - L3 LINE CR1 -435 1142 652 2591 101 8 16 chr10 26925652 26926019 -113390746 - THE1B LTR MaLR 0 364 1 7575 114 15 3 chr10 26926019 26927160 -113389605 - THE1B-int LTR MaLR 0 1580 427 2180 39 0 0 chr10 26927169 26927450 -113389315 - L1P LINE L1 -1004 5142 4862 809 20 20 0 chr10 26927450 26927552 -113389213 + L1P LINE L1 5144 5247 -899 201 352 116 36 chr10 26927907 26928208 -113388557 + L3b LINE CR1 1109 1433 -150 189 0 0 0 chr10 26928483 26928504 -113388261 + (T)n Simple_repeat Simple_repeat 1 21 0 200 199 0 4 chr10 26928973 26929017 -113387748 + MIR SINE MIR 114 157 -51 1143 120 0 24 chr10 26929133 26929300 -113387465 - AluSg/x SINE Alu -11 299 137 414 241 52 108 chr10 26929359 26929571 -113387194 - MIR SINE MIR 0 262 63 2286 138 96 5 chr10 26929763 26930189 -113386576 + MER4C LTR ERV1 1 465 0 366 215 176 71 chr10 26930283 26930541 -113386224 + LTR16A1 LTR ERVL 82 386 -71 2095 137 3 0 chr10 26930541 26930840 -113385925 - AluSx SINE Alu -12 300 1 366 215 176 71 chr10 26930840 26930921 -113385844 + LTR16A1 LTR ERVL 386 457 0 1737 152 118 0 chr10 26931208 26931531 -113385234 - MER46B DNA MER2_type 0 236 1 264 30 0 0 chr10 26931947 26931980 -113384785 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 23 33 0 0 chr10 26932704 26932734 -113384031 + AT_rich Low_complexity Low_complexity 1 30 0 447 229 91 14 chr10 26932839 26933049 -113383716 - L1ME4a LINE L1 -190 5931 5706 1778 194 0 0 chr10 26933082 26933381 -113383384 - AluJb SINE Alu -13 299 1 490 184 20 116 chr10 26933440 26933587 -113383178 + FLAM_A SINE Alu 1 133 0 1511 148 151 42 chr10 26934556 26934913 -113381852 - MSTD LTR MaLR 0 396 1 302 340 0 10 chr10 26935152 26935252 -113381513 + MIR3 SINE MIR 89 187 -21 326 280 144 15 chr10 26936868 26937000 -113379765 + MER115 DNA AcHobo 18 166 -527 810 239 17 6 chr10 26937000 26937180 -113379585 + MER5A DNA MER1_type 3 184 -5 366 245 21 11 chr10 26937189 26937283 -113379482 + MER115 DNA AcHobo 159 253 -440 622 213 65 7 chr10 26937390 26937545 -113379220 + MER115 DNA AcHobo 530 693 0 282 116 0 0 chr10 26937560 26937603 -113379162 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1236 186 82 28 chr10 26937605 26937960 -113378805 - L1M4b LINE L1 -5248 1611 1238 767 230 138 0 chr10 26937982 26938199 -113378566 - L1M4b LINE L1 -6602 257 11 21 0 0 0 chr10 26938208 26938229 -113378536 + AT_rich Low_complexity Low_complexity 1 21 0 2104 121 7 0 chr10 26938235 26938516 -113378249 + AluSx SINE Alu 1 316 0 211 91 0 0 chr10 26938516 26938549 -113378216 + (CAAA)n Simple_repeat Simple_repeat 2 152 0 431 273 0 0 chr10 26938552 26938629 -113378136 - L2 LINE L2 -22 3250 3174 1910 135 16 29 chr10 26939387 26939699 -113377066 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr10 26940142 26940163 -113376602 + AT_rich Low_complexity Low_complexity 1 21 0 700 301 19 120 chr10 26940275 26940354 -113376411 - L2 LINE L2 -1 3271 3186 2150 118 0 7 chr10 26940354 26940651 -113376114 + AluSx SINE Alu 1 295 -17 700 301 19 120 chr10 26940651 26940996 -113375769 - L2 LINE L2 -86 3186 2890 988 163 0 0 chr10 26941375 26941522 -113375243 + FRAM SINE Alu 1 147 -19 20078 151 31 15 chr10 26941574 26942123 -113374642 - L1MA2 LINE L1 0 7723 7184 2283 91 3 3 chr10 26942123 26942430 -113374335 - AluSg SINE Alu -3 307 1 20078 151 31 15 chr10 26942430 26944396 -113372369 - L1MA2 LINE L1 -539 7184 5251 1996 149 0 0 chr10 26944396 26944678 -113372087 - AluJb SINE Alu -30 282 1 20078 151 31 15 chr10 26944678 26946050 -113370715 - L1MA2 LINE L1 -2472 5251 3903 1828 205 0 0 chr10 26946050 26946362 -113370403 - AluJb SINE Alu 0 312 1 20078 151 31 15 chr10 26946362 26950063 -113366702 - L1MA2 LINE L1 -3820 3903 12 230 294 0 0 chr10 26950632 26950683 -113366082 + polypurine Low_complexity Low_complexity 1 51 0 1964 158 6 13 chr10 26950939 26951250 -113365515 + AluJo SINE Alu 1 309 -3 245 252 78 0 chr10 26951473 26951576 -113365189 - MER97b DNA MER1_type? -194 859 749 954 73 32 0 chr10 26951580 26951735 -113365030 + AluSc SINE Alu 156 314 0 307 141 52 104 chr10 26951735 26951870 -113364895 - MER97a DNA MER1_type? -169 725 598 5444 115 21 14 chr10 26951891 26952781 -113363984 - L1PB3 LINE L1 -4 6150 5254 2153 223 51 22 chr10 26952798 26952823 -113363942 - MER97b DNA MER1_type? -445 608 585 1483 179 4 11 chr10 26952823 26953097 -113363668 + AluJo SINE Alu 11 282 -30 194 79 0 26 chr10 26953100 26953138 -113363627 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2153 223 51 22 chr10 26953138 26953699 -113363066 - MER97b DNA MER1_type? -469 584 1 308 286 67 17 chr10 26955056 26955175 -113361590 + MIR3 SINE MIR 69 193 -15 1236 66 6 12 chr10 26955729 26955896 -113360869 + L1PA10 LINE L1 5994 6159 -9 1505 170 64 7 chr10 26956457 26956739 -113360026 - LTR32 LTR ERVL 0 471 174 2133 128 3 10 chr10 26956877 26957189 -113359576 + AluSx SINE Alu 1 310 -2 2175 142 0 0 chr10 26959853 26960195 -113356570 - AluSx SINE Alu 0 342 1 283 342 70 9 chr10 26960425 26960539 -113356226 - MIR SINE MIR -113 149 29 321 213 176 9 chr10 26960677 26960785 -113355980 + MER5B DNA MER1_type 46 171 -7 4381 175 52 13 chr10 26961221 26962090 -113354675 + MER4D LTR ERV1 1 903 0 1805 139 0 77 chr10 26962299 26962404 -113354361 + AluJb SINE Alu 1 112 -200 4124 107 24 6 chr10 26962404 26963028 -113353737 - MER41B LTR ERV1 0 635 1 1805 139 0 77 chr10 26963028 26963074 -113353691 + AluJb SINE Alu 112 160 -152 2162 111 3 7 chr10 26963074 26963380 -113353385 + AluSg SINE Alu 1 305 -5 1805 139 0 77 chr10 26963380 26963565 -113353200 + AluJb SINE Alu 160 312 0 1894 164 3 3 chr10 26963691 26964002 -113352763 - AluSx SINE Alu -1 311 1 1967 144 3 7 chr10 26964149 26964448 -113352317 + AluSx SINE Alu 1 298 -14 1690 166 26 29 chr10 26964660 26964967 -113351798 - AluJo SINE Alu -6 306 1 331 224 0 0 chr10 26965286 26965353 -113351412 + MIR SINE MIR 89 155 -107 877 267 32 4 chr10 26965451 26965702 -113351063 - MIR SINE MIR -2 260 3 994 217 75 5 chr10 26967028 26967240 -113349525 - MIR SINE MIR 0 262 36 2191 122 3 0 chr10 26967507 26967811 -113348954 - AluSx SINE Alu -7 305 1 187 203 31 16 chr10 26968039 26968103 -113348662 + CT-rich Low_complexity Low_complexity 3 67 0 7896 13 0 0 chr10 26968226 26969501 -113347264 + L1PA2 LINE L1 4879 6155 0 2287 110 0 3 chr10 26975094 26975404 -113341361 + AluSx SINE Alu 1 309 -3 771 107 42 0 chr10 26975404 26975621 -113341144 + GA-rich Low_complexity Low_complexity 1 226 0 474 18 0 0 chr10 26975623 26975678 -113341087 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 2012 113 36 0 chr10 26976302 26976577 -113340188 - AluSx SINE Alu -27 285 1 188 390 25 25 chr10 26976789 26976907 -113339858 + L2 LINE L2 3137 3254 -18 1983 135 0 23 chr10 26977181 26977485 -113339280 - AluSx SINE Alu -15 297 1 197 181 29 67 chr10 26978714 26978819 -113337946 + A-rich Low_complexity Low_complexity 2 102 0 189 147 0 0 chr10 26978851 26978885 -113337880 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 299 256 70 0 chr10 26979783 26979869 -113336896 + MIR SINE MIR 98 189 -73 261 331 71 52 chr10 26980109 26980263 -113336502 - L2 LINE L2 -254 3018 2862 2447 77 0 10 chr10 26980269 26980580 -113336185 - AluY SINE Alu -3 308 1 251 322 61 26 chr10 26980606 26980721 -113336044 - L2 LINE L2 -13 3300 3182 389 313 42 0 chr10 26981164 26981260 -113335505 - L2 LINE L2 -57 3215 3116 2380 96 0 0 chr10 26981326 26981628 -113335137 + AluY SINE Alu 1 302 -9 184 260 100 0 chr10 26981663 26981713 -113335052 - MIR SINE MIR -112 150 96 312 194 43 115 chr10 26981845 26981984 -113334781 + L1MA9 LINE L1 6122 6250 -62 2295 174 42 10 chr10 26983184 26983684 -113333081 - Charlie1b DNA MER1_type -7 516 1 247 368 120 0 chr10 26984057 26984174 -113332591 + L3b LINE CR1 1398 1528 -55 1063 329 94 50 chr10 26986465 26987378 -113329387 - L3 LINE CR1 -80 1497 545 446 294 165 7 chr10 26987644 26987846 -113328919 + MIR SINE MIR 10 241 -21 2266 96 0 13 chr10 26988270 26988572 -113328193 - AluY SINE Alu -13 298 1 448 297 86 36 chr10 26988775 26988997 -113327768 - L1ME4a LINE L1 -230 5891 5659 32 43 0 0 chr10 26988965 26989011 -113327754 + AT_rich Low_complexity Low_complexity 1 46 0 * 1389 150 0 10 chr10 26989037 26989244 -113327521 - AluJo SINE Alu -21 291 87 256 191 0 0 chr10 26989628 26989670 -113327095 + L2 LINE L2 3184 3225 -47 240 241 0 0 chr10 26990386 26990440 -113326325 + L3 LINE CR1 1215 1268 -309 600 219 60 13 chr10 26991014 26991165 -113325600 + MER3 DNA MER1_type 48 205 -4 647 279 55 45 chr10 26991681 26991989 -113324776 + Charlie7 DNA MER1_type 54 364 -2248 * 2278 226 139 34 chr10 26991984 26993005 -113323760 + Charlie7 DNA MER1_type 1474 2601 -11 25 51 0 0 chr10 26993071 26993110 -113323655 + AT_rich Low_complexity Low_complexity 1 39 0 325 163 272 0 chr10 26996449 26996541 -113320224 + L2 LINE L2 3196 3312 -1 21 0 0 0 chr10 26997386 26997407 -113319358 + AT_rich Low_complexity Low_complexity 1 21 0 544 297 64 39 chr10 26998279 26998562 -113318203 - L2 LINE L2 -1 3312 3023 326 189 95 0 chr10 26999791 26999865 -113316900 - MER69 DNA AcHobo -7 2519 2439 * 1087 291 123 5 chr10 26999862 27000261 -113316504 - MER69 DNA AcHobo -2055 471 26 245 272 170 14 chr10 27001254 27001401 -113315364 + MLT1-int LTR MaLR 290 459 -912 2125 106 14 0 chr10 27001478 27001761 -113315004 - AluSx SINE Alu -25 287 1 2548 152 8 15 chr10 27001771 27002244 -113314521 - L1MB2 LINE L1 -2 6169 5700 973 216 67 24 chr10 27002318 27002350 -113314415 + L1MD3 LINE L1 7713 7742 -253 2277 139 32 5 chr10 27002350 27002730 -113314035 - MLT1B LTR MaLR 0 390 1 973 216 67 24 chr10 27002730 27002952 -113313813 + L1MD3 LINE L1 7742 7978 -17 2408 69 0 0 chr10 27003020 27003311 -113313454 + AluY SINE Alu 1 291 -20 256 250 144 28 chr10 27003518 27003698 -113313067 + L1ME4a LINE L1 3438 3638 -2508 864 279 143 48 chr10 27003900 27004387 -113312378 + L1ME4a LINE L1 3870 4309 -1917 2242 100 10 0 chr10 27004387 27004686 -113312079 + AluSq SINE Alu 4 305 -8 864 279 143 48 chr10 27004686 27004795 -113311970 + L1ME4a LINE L1 4309 4406 -1820 2247 140 109 0 chr10 27004795 27005181 -113311584 + MSTA LTR MaLR 1 428 0 864 279 143 48 chr10 27005181 27005643 -113311122 + L1ME4a LINE L1 4406 4823 -1403 1428 162 57 153 chr10 27005643 27006081 -113310684 + MSTD LTR MaLR 1 396 0 864 279 143 48 chr10 27006081 27006160 -113310605 + L1ME4a LINE L1 4823 4893 -1333 2289 99 0 0 chr10 27006160 27006462 -113310303 - AluSc SINE Alu -7 302 1 864 279 143 48 chr10 27006462 27006997 -113309768 + L1ME4a LINE L1 4893 5707 -519 21 0 0 0 chr10 27007654 27007675 -113309090 + AT_rich Low_complexity Low_complexity 1 21 0 2311 96 3 22 chr10 27008161 27008475 -113308290 + AluSg SINE Alu 1 308 -2 423 0 0 0 chr10 27008708 27008755 -113308010 + (CA)n Simple_repeat Simple_repeat 2 48 0 2173 147 0 12 chr10 27009590 27009930 -113306835 + MER1B DNA MER1_type 1 336 -1 1356 210 83 35 chr10 27010039 27010462 -113306303 + LTR40c LTR ERVL 1 443 -22 242 222 104 52 chr10 27010726 27010861 -113305904 + L1ME4a LINE L1 5978 6119 -2 2528 47 3 7 chr10 27011027 27011325 -113305440 + AluY SINE Alu 1 297 -14 2196 214 16 87 chr10 27011345 27012081 -113304684 + L1PA15 LINE L1 2612 3282 -2864 2225 123 33 36 chr10 27012081 27012446 -113304319 - THE1B LTR MaLR 0 364 1 2196 214 16 87 chr10 27012446 27012545 -113304220 + L1PA15 LINE L1 3282 3387 -2759 13486 52 2 3 chr10 27012560 27015055 -113301710 + L1PA5 LINE L1 3652 6147 -7 8920 174 18 38 chr10 27015047 27017454 -113299311 + L1PA15 LINE L1 3387 5786 -379 * 1644 136 86 44 chr10 27017454 27017814 -113298951 - THE1C LTR MaLR 0 375 1 8920 174 18 38 chr10 27017814 27018187 -113298578 + L1PA15 LINE L1 5786 6165 0 382 300 55 61 chr10 27020774 27021067 -113295698 + HAL1 LINE L1 811 1101 -1406 978 279 142 22 chr10 27021090 27021759 -113295006 + HAL1 LINE L1 1169 1917 -590 2157 126 3 3 chr10 27021808 27022118 -113294647 + AluSx SINE Alu 1 310 -2 2109 125 0 0 chr10 27022769 27023057 -113293708 - AluSx SINE Alu -24 288 1 943 276 54 43 chr10 27023765 27024210 -113292555 + L2 LINE L2 2827 3276 -37 1507 134 127 14 chr10 27024218 27024494 -113292271 - MER47A DNA MER2_type 0 366 60 256 28 0 0 chr10 27024541 27024577 -113292188 - L1PA2 LINE L1 -5 6150 6115 240 250 0 0 chr10 27024577 27024629 -113292136 - MER47A DNA MER2_type -308 58 7 542 309 81 13 chr10 27024639 27024875 -113291890 - MIR SINE MIR -10 252 1 1998 156 16 24 chr10 27024910 27025288 -113291477 - THE1C LTR MaLR 0 375 1 247 389 54 6 chr10 27025745 27025912 -113290853 + MER5A DNA MER1_type 8 182 -7 313 234 85 11 chr10 27026022 27026116 -113290649 + MIR3 SINE MIR 100 200 -8 1856 161 7 0 chr10 27026683 27026987 -113289778 + AluJb SINE Alu 1 306 0 399 41 0 0 chr10 27027430 27027479 -113289286 + (CA)n Simple_repeat Simple_repeat 2 50 0 14330 42 1 7 chr10 27027516 27030049 -113286716 - L1PA5 LINE L1 -3 6151 3633 2447 72 0 3 chr10 27030049 27030353 -113286412 + AluY SINE Alu 1 303 -8 14330 42 1 7 chr10 27030353 27030377 -113286388 - L1PA5 LINE L1 -2521 3633 3610 8563 44 3 1 chr10 27030377 27031460 -113285305 - L1PA5 LINE L1 -2445 3701 2617 258 30 0 0 chr10 27031459 27031492 -113285273 + L1PA5 LINE L1 2578 2610 -3536 * 2230 64 50 0 chr10 27031492 27031772 -113284993 - AluY SINE Alu -17 294 1 232 312 11 11 chr10 27032008 27032101 -113284664 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 1173 194 9 0 chr10 27032171 27032388 -113284377 + MER20 DNA MER1_type 1 219 0 914 178 32 42 chr10 27032869 27033124 -113283641 + AluJo SINE Alu 2 304 -8 693 205 35 6 chr10 27033256 27033427 -113283338 - MER104 DNA MER2_type -1 179 4 1832 174 0 0 chr10 27035296 27035594 -113281171 + AluJb SINE Alu 1 298 -14 346 115 0 0 chr10 27035696 27035748 -113281017 + Alu SINE Alu 250 301 -1 349 360 23 0 chr10 27035798 27035946 -113280819 - MIR3 SINE MIR -41 167 15 228 286 200 9 chr10 27036752 27036857 -113279908 - MIR3 SINE MIR -40 168 44 309 319 265 15 chr10 27037023 27037227 -113279538 + MIR SINE MIR 2 256 -6 * 336 326 30 30 chr10 27037222 27037357 -113279408 + MIR3 SINE MIR 50 184 -24 22 80 0 0 chr10 27037966 27038016 -113278749 + AT_rich Low_complexity Low_complexity 1 50 0 239 366 79 10 chr10 27038556 27038657 -113278108 + MIR SINE MIR 33 116 -92 845 270 5 5 chr10 27039198 27039398 -113277367 + MIR SINE MIR 49 248 -14 545 245 41 20 chr10 27039756 27039903 -113276862 - MIR3 SINE MIR -25 183 34 22 0 0 0 chr10 27039970 27039992 -113276773 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 27042860 27042888 -113273877 + GC_rich Low_complexity Low_complexity 1 28 0 574 240 0 8 chr10 27043869 27043994 -113272771 + L2 LINE L2 3190 3313 0 238 346 10 50 chr10 27044518 27044619 -113272146 + MIR SINE MIR 28 124 -84 1475 148 25 44 chr10 27044833 27045150 -113271615 - MER33 DNA MER1_type 0 324 14 186 71 0 0 chr10 27045370 27045398 -113271367 + (CA)n Simple_repeat Simple_repeat 2 29 0 693 252 78 71 chr10 27045444 27045753 -113271012 - L2 LINE L2 0 3313 3003 285 333 56 40 chr10 27046468 27046594 -113270171 + MIR SINE MIR 20 147 -61 290 234 186 10 chr10 27046976 27047080 -113269685 - MER5A DNA MER1_type -72 106 1 180 0 0 0 chr10 27047141 27047161 -113269604 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 471 278 86 6 chr10 27047239 27047401 -113269364 - MIR SINE MIR -11 251 77 892 215 32 16 chr10 27047431 27047617 -113269148 - MER5A DNA MER1_type 0 189 1 4159 119 35 30 chr10 27048625 27049262 -113267503 - MER51C LTR ERV1 0 640 1 2650 121 35 42 chr10 27049373 27049729 -113267036 + L1MA8 LINE L1 5838 6192 -99 1906 159 0 3 chr10 27049729 27050018 -113266747 + AluSx SINE Alu 9 296 -16 2650 121 35 42 chr10 27050018 27050115 -113266650 + L1MA8 LINE L1 6192 6288 -3 796 207 0 0 chr10 27050269 27050409 -113266356 - FLAM_C SINE Alu -2 141 2 402 147 0 0 chr10 27050736 27050804 -113265961 + (TCC)n Simple_repeat Simple_repeat 3 70 0 752 233 0 0 chr10 27051451 27051584 -113265181 + FLAM_A SINE Alu 1 133 0 234 0 0 0 chr10 27051976 27052002 -113264763 + (T)n Simple_repeat Simple_repeat 1 26 0 2455 224 17 82 chr10 27052194 27052835 -113263930 + L1ME1 LINE L1 5334 6015 -151 2444 67 3 16 chr10 27052835 27053150 -113263615 + AluY SINE Alu 1 311 0 2455 224 17 82 chr10 27053150 27053166 -113263599 + L1ME1 LINE L1 6015 6030 -136 2430 97 0 0 chr10 27053166 27053475 -113263290 + AluSg SINE Alu 1 309 -1 2455 224 17 82 chr10 27053475 27053608 -113263157 + L1ME1 LINE L1 6030 6089 -77 4277 66 193 2 chr10 27053608 27054184 -113262581 + LTR12 LTR ERV1 3 688 0 2455 224 17 82 chr10 27054184 27054252 -113262513 + L1ME1 LINE L1 6089 6160 -6 2153 134 3 0 chr10 27054272 27054578 -113262187 - AluSx SINE Alu -5 307 1 249 281 0 0 chr10 27054797 27054854 -113261911 - L2 LINE L2 -1 3312 3256 627 270 169 41 chr10 27054894 27055499 -113261266 - L2 LINE L2 -48 3265 2545 3131 157 19 6 chr10 27055527 27056063 -113260702 + L1MA3 LINE L1 5762 6304 -1 1037 270 41 47 chr10 27056267 27056818 -113259947 + L1MB4 LINE L1 5279 5836 -344 22 0 0 0 chr10 27056950 27056972 -113259793 + AT_rich Low_complexity Low_complexity 1 22 0 182 174 22 0 chr10 27057047 27057093 -113259672 + GA-rich Low_complexity Low_complexity 4 50 0 195 42 0 0 chr10 27059390 27059414 -113257351 + (A)n Simple_repeat Simple_repeat 1 24 0 2174 126 0 10 chr10 27059818 27060119 -113256646 - AluSx SINE Alu -11 301 4 248 0 0 30 chr10 27060216 27060249 -113256516 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 565 121 85 99 chr10 27060620 27060761 -113256004 + MER53 DNA DNA 1 139 -50 790 175 42 0 chr10 27060762 27060882 -113255883 + FLAM_C SINE Alu 2 126 -17 2037 109 21 14 chr10 27060977 27061262 -113255503 + AluSc SINE Alu 1 287 -22 268 261 0 0 chr10 27061269 27061334 -113255431 + MER53 DNA DNA 125 189 0 1666 197 7 14 chr10 27061440 27061734 -113255031 - AluJo SINE Alu -20 292 1 291 104 0 0 chr10 27061972 27062020 -113254745 + (TC)n Simple_repeat Simple_repeat 1 48 0 346 281 78 7 chr10 27062399 27062552 -113254213 + L1MC/D LINE L1 5620 5783 -2025 1270 297 70 30 chr10 27062581 27062876 -113253889 + L1ME LINE L1 4106 4388 -1758 2045 133 6 16 chr10 27062876 27063191 -113253574 + AluSx SINE Alu 1 312 0 1270 297 70 30 chr10 27063191 27063689 -113253076 + L1ME LINE L1 4388 4931 -1215 985 301 35 56 chr10 27063694 27064126 -113252639 + LTR16A LTR ERVL 28 450 0 955 250 117 25 chr10 27064133 27064749 -113252016 + L1ME LINE L1 4943 5630 -540 2217 176 3 16 chr10 27064749 27065119 -113251646 + MLT1A1 LTR MaLR 1 365 0 955 250 117 25 chr10 27065119 27065200 -113251565 + L1ME LINE L1 5630 5702 -468 572 224 85 76 chr10 27065218 27065266 -113251499 + L1M3 LINE L1 5614 5660 -520 2128 81 0 0 chr10 27065266 27065526 -113251239 - AluY SINE Alu -9 302 43 572 224 85 76 chr10 27065526 27065690 -113251075 + L1M3 LINE L1 5660 5828 -352 2052 135 3 14 chr10 27065882 27066178 -113250587 + AluSx SINE Alu 1 293 -19 1663 116 43 0 chr10 27066327 27066585 -113250180 + L1MA4 LINE L1 6018 6286 -14 1772 179 0 10 chr10 27066690 27066991 -113249774 + AluJo SINE Alu 1 298 -14 192 40 0 0 chr10 27066991 27067016 -113249749 + (GA)n Simple_repeat Simple_repeat 2 26 0 2202 176 53 10 chr10 27067249 27067594 -113249171 + MLT2D LTR ERVL 1 330 -84 323 22 0 22 chr10 27067594 27067639 -113249126 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 342 0 0 0 chr10 27067638 27067676 -113249089 + (CA)n Simple_repeat Simple_repeat 1 38 0 2202 176 53 10 chr10 27067639 27067727 -113249038 + MLT2D LTR ERVL 330 414 0 651 206 116 0 chr10 27068334 27068480 -113248285 - MER5A DNA MER1_type -26 163 1 1772 162 7 10 chr10 27068551 27068841 -113247924 - AluJo SINE Alu -23 289 1 196 391 16 0 chr10 27069015 27069079 -113247686 - L2 LINE L2 -92 3180 3116 451 241 98 8 chr10 27069383 27069516 -113247249 - MLT1B LTR MaLR -245 145 1 2188 109 3 7 chr10 27069570 27069874 -113246891 + AluSx SINE Alu 1 303 -9 2195 162 34 29 chr10 27069933 27070481 -113246284 + MLT2A2 LTR ERVL 3 554 0 799 198 12 6 chr10 27070509 27070671 -113246094 + MER3 DNA MER1_type 7 122 -87 2333 98 16 0 chr10 27071126 27071433 -113245332 + AluSx SINE Alu 1 312 0 234 324 36 54 chr10 27071548 27071659 -113245106 + MIR SINE MIR 13 121 -87 3164 128 20 0 chr10 27071663 27072203 -113244562 + L1MA5A LINE L1 5669 6292 -5 205 89 44 22 chr10 27072312 27072357 -113244408 + CT-rich Low_complexity Low_complexity 2 47 0 813 188 0 40 chr10 27072360 27072509 -113244256 - FLAM_C SINE Alu 0 143 1 306 408 40 26 chr10 27072550 27073006 -113243759 + L2 LINE L2 2372 2833 -481 2294 99 3 0 chr10 27073197 27073491 -113243274 + AluSx SINE Alu 1 295 -17 2128 122 7 0 chr10 27073624 27073918 -113242847 - AluSx SINE Alu -16 296 1 1486 256 36 17 chr10 27073920 27074341 -113242424 + LTR47B LTR ERVL 15 443 0 260 250 0 33 chr10 27074341 27074397 -113242368 - MER94 DNA DNA -77 57 4 258 258 200 17 chr10 27075383 27075533 -113241232 + L1ME LINE L1 5475 5596 -525 1657 150 13 80 chr10 27075533 27075846 -113240919 + AluSx SINE Alu 1 292 -20 258 258 200 17 chr10 27075846 27075990 -113240775 + L1ME LINE L1 5596 5823 -298 23 33 0 0 chr10 27076016 27076046 -113240719 + AT_rich Low_complexity Low_complexity 1 30 0 1766 144 17 34 chr10 27076113 27076411 -113240354 + AluJo SINE Alu 3 295 -17 608 101 72 15 chr10 27076445 27076453 -113240312 + (TA)n Simple_repeat Simple_repeat 1 7 -300 216 0 0 0 chr10 27076453 27076477 -113240288 + (TG)n Simple_repeat Simple_repeat 2 25 0 608 101 72 15 chr10 27076477 27076736 -113240029 + (TA)n Simple_repeat Simple_repeat 7 307 0 567 255 15 152 chr10 27076828 27076905 -113239860 + L2 LINE L2 2927 3013 -259 2973 94 3 0 chr10 27076905 27077268 -113239497 - THE1B LTR MaLR 0 364 1 567 255 15 152 chr10 27077268 27077586 -113239179 + L2 LINE L2 3013 3268 -4 582 227 170 35 chr10 27077801 27078030 -113238735 + MIR SINE MIR 3 262 0 496 122 178 0 chr10 27078148 27078238 -113238527 + MLT2B1 LTR ERVL 1 106 -414 1223 184 14 78 chr10 27078244 27078336 -113238429 + AluJb SINE Alu 26 122 -190 5560 36 12 8 chr10 27078336 27078974 -113237791 + L1PA5 LINE L1 5514 6154 0 237 65 0 0 chr10 27078974 27079005 -113237760 + (TA)n Simple_repeat Simple_repeat 1 31 0 1223 184 14 78 chr10 27079005 27079204 -113237561 + AluJb SINE Alu 120 299 -13 1275 238 55 28 chr10 27079204 27079565 -113237200 + MLT2B1 LTR ERVL 110 480 -40 315 269 13 0 chr10 27079565 27079643 -113237122 + L1MC4 LINE L1 6620 6698 -1344 564 149 0 23 chr10 27079741 27079828 -113236937 + AluJ/FRAM SINE Alu 214 298 -14 437 296 154 60 chr10 27080857 27081293 -113235472 - L2 LINE L2 -2 3311 2835 4895 165 24 21 chr10 27081342 27082500 -113234265 + L1MB3 LINE L1 4969 6128 -55 771 187 0 8 chr10 27082500 27082623 -113234142 + FLAM_A SINE Alu 1 122 -11 4895 165 24 21 chr10 27082623 27082678 -113234087 + L1MB3 LINE L1 6128 6181 -2 449 303 104 66 chr10 27082681 27083032 -113233733 - L2 LINE L2 -556 2758 2391 2125 114 3 10 chr10 27083032 27083338 -113233427 + AluSg SINE Alu 6 309 -1 449 303 104 66 chr10 27083338 27083352 -113233413 - L2 LINE L2 -923 2391 2379 339 264 108 100 chr10 27083348 27083417 -113233348 + L2 LINE L2 2912 2979 -334 * 1921 138 7 3 chr10 27083417 27083706 -113233059 - AluSx SINE Alu -22 290 1 339 264 108 100 chr10 27083706 27083977 -113232788 + L2 LINE L2 2979 3255 -58 1597 171 44 16 chr10 27084130 27084445 -113232320 - L1MA7 LINE L1 -4 6287 5964 194 286 219 34 chr10 27084477 27084596 -113232169 - L2 LINE L2 -1975 1339 1199 * 304 171 207 0 chr10 27084584 27084666 -113232099 - L2 LINE L2 -4 3268 3170 2495 74 0 3 chr10 27085207 27085517 -113231248 + AluY SINE Alu 1 309 -2 246 237 97 44 chr10 27086773 27086887 -113229878 + MIR SINE MIR 23 142 -66 1034 297 34 31 chr10 27087001 27087418 -113229347 - LTR16A LTR ERVL -8 442 25 233 211 0 84 chr10 27088677 27088748 -113228017 + MSTB2 LTR MaLR 310 374 -83 2073 154 94 30 chr10 27089080 27089482 -113227283 - MSTB1 LTR MaLR -4 428 1 1453 109 24 148 chr10 27089621 27089743 -113227022 + L1MA5A LINE L1 6004 6139 -158 2160 118 3 0 chr10 27089743 27090030 -113226735 + AluSx SINE Alu 1 288 -24 1453 109 24 148 chr10 27090030 27090238 -113226527 + L1MA5A LINE L1 6139 6293 -4 2087 148 0 0 chr10 27090241 27090539 -113226226 + AluSx SINE Alu 1 298 -14 397 311 48 6 chr10 27090640 27090807 -113225958 - MIR SINE MIR 0 262 89 620 244 58 6 chr10 27091070 27091226 -113225539 + FRAM SINE Alu 1 164 -2 1876 130 53 0 chr10 27092447 27092623 -113224142 - AluJo SINE Alu -3 309 111 282 56 0 0 chr10 27092623 27092659 -113224106 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 1876 130 53 0 chr10 27092659 27092766 -113223999 - AluJo SINE Alu -201 111 11 815 199 0 7 chr10 27092937 27093077 -113223688 - L1PB4 LINE L1 -14 6142 6002 3890 97 32 0 chr10 27093077 27093614 -113223151 - MER41A LTR ERV1 0 554 1 12883 92 24 8 chr10 27093624 27095106 -113221659 - MER41A-int LTR ERV1 -12 5934 3610 2093 138 3 0 chr10 27095106 27095403 -113221362 + AluSx SINE Alu 1 298 -14 12883 92 24 8 chr10 27095403 27095918 -113220847 - MER41A-int LTR ERV1 -2336 3610 3105 3541 143 55 10 chr10 27095935 27096550 -113220215 - L1PB4 LINE L1 -153 6003 5361 578 274 52 52 chr10 27097089 27097341 -113219424 - MIR SINE MIR 0 262 11 447 125 0 0 chr10 27098040 27098112 -113218653 + (CA)n Simple_repeat Simple_repeat 2 73 0 811 271 57 28 chr10 27098114 27098468 -113218297 + L1ME4a LINE L1 5596 5959 -162 232 123 53 0 chr10 27098435 27098492 -113218273 + L1MC4 LINE L1 6642 6701 -1341 * 846 206 0 0 chr10 27098684 27098830 -113217935 + FRAM SINE Alu 1 138 -38 310 162 29 0 chr10 27099139 27099207 -113217558 + L1MA4 LINE L1 6224 6293 -7 32 0 0 0 chr10 27099209 27099241 -113217524 + AT_rich Low_complexity Low_complexity 1 32 0 201 194 0 56 chr10 27099804 27099876 -113216889 + T-rich Low_complexity Low_complexity 2 69 0 2040 125 0 0 chr10 27099885 27100173 -113216592 + AluSx SINE Alu 1 288 -24 567 203 42 28 chr10 27101512 27101655 -113215110 + FRAM SINE Alu 31 175 -1 426 127 0 0 chr10 27101972 27102043 -113214722 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 428 196 80 0 chr10 27102469 27102607 -113214158 - MER3 DNA MER1_type 0 2624 2476 407 104 149 0 chr10 27102612 27102679 -113214086 - MER3 DNA MER1_type -92 117 41 4273 112 17 1 chr10 27103387 27104506 -113212259 + L1PA13 LINE L1 4716 5853 -310 2009 95 7 7 chr10 27104607 27104901 -113211864 + L1PA13 LINE L1 5856 6149 -14 1879 143 0 0 chr10 27105077 27105342 -113211423 + AluSx SINE Alu 1 265 -47 231 62 0 0 chr10 27105342 27105374 -113211391 + Alu SINE Alu 105 136 -30 249 109 0 0 chr10 27105379 27105425 -113211340 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 3463 245 79 32 chr10 27105950 27107720 -113209045 + L1MEc LINE L1 73 2088 -4308 2134 234 91 2 chr10 27107803 27108731 -113208034 + L1MEc LINE L1 2206 3337 -2878 1535 153 0 8 chr10 27109590 27109839 -113206926 - AluJo SINE Alu -15 297 51 327 268 78 13 chr10 27112180 27112333 -113204432 - MLT1J1 LTR MaLR -5 441 279 235 273 0 0 chr10 27112373 27112417 -113204348 - MLT1J1 LTR MaLR -275 171 128 493 271 66 13 chr10 27112435 27112586 -113204179 - MLT1J2 LTR MaLR -21 429 271 328 325 124 62 chr10 27113348 27113671 -113203094 + L2 LINE L2 2925 3267 -5 381 343 99 21 chr10 27113821 27114063 -113202702 + MIR SINE MIR 2 262 0 2038 116 3 14 chr10 27114655 27114968 -113201797 + AluSx SINE Alu 1 310 0 681 308 166 56 chr10 27115049 27116168 -113200597 - L2 LINE L2 -2 3270 2037 478 113 47 0 chr10 27116973 27117079 -113199686 + GA-rich Low_complexity Low_complexity 2 112 0 240 236 56 0 chr10 27117701 27117773 -113198992 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 518 270 69 16 chr10 27117817 27118006 -113198759 - L1MC4a LINE L1 -1922 5886 5688 2356 98 0 13 chr10 27118694 27119011 -113197754 + AluSq SINE Alu 1 313 0 1945 131 51 51 chr10 27119669 27120044 -113196721 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr10 27120735 27120764 -113196001 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 27121273 27121301 -113195464 + AT_rich Low_complexity Low_complexity 1 28 0 692 244 103 62 chr10 27121412 27121454 -113195311 - HsTC2 DNA Tc2 2 1900 1861 2099 98 0 0 chr10 27121454 27121728 -113195037 + AluSx SINE Alu 21 294 -18 692 244 103 62 chr10 27121728 27121920 -113194845 - HsTC2 DNA Tc2 -37 1861 1678 2986 173 66 41 chr10 27121920 27122635 -113194130 + MER44D DNA MER2_type 1 605 0 692 244 103 62 chr10 27122635 27122834 -113193931 - HsTC2 DNA Tc2 -220 1678 1272 * 840 217 106 98 chr10 27122826 27122963 -113193802 - HsTC2 DNA Tc2 -1526 372 238 2317 100 0 0 chr10 27122963 27123262 -113193503 - AluSx SINE Alu -13 299 1 840 217 106 98 chr10 27123262 27123283 -113193482 - HsTC2 DNA Tc2 -1660 238 219 2317 95 0 3 chr10 27123283 27123579 -113193186 - AluSx SINE Alu -17 295 1 840 217 106 98 chr10 27123579 27123787 -113192978 - HsTC2 DNA Tc2 -1679 219 2 877 195 0 37 chr10 27124085 27124249 -113192516 + AluJo SINE Alu 3 160 -152 748 293 12 30 chr10 27124385 27124716 -113192049 + L1ME1 LINE L1 5824 6148 -18 526 263 158 56 chr10 27124858 27125103 -113191662 - L1MDa LINE L1 -2931 3609 3322 1448 196 3 48 chr10 27125103 27125415 -113191350 - AluJb SINE Alu -14 298 1 526 263 158 56 chr10 27125415 27125492 -113191273 - L1MDa LINE L1 -3218 3322 3254 2106 137 3 0 chr10 27125543 27125843 -113190922 - AluSq SINE Alu -12 301 1 312 137 0 0 chr10 27125934 27125985 -113190780 + (CATA)n Simple_repeat Simple_repeat 2 52 0 884 263 41 26 chr10 27126174 27126623 -113190142 - L1MDa LINE L1 -3616 2924 2471 21185 46 49 3 chr10 27126835 27129554 -113187211 - L1P LINE L1 -3301 2845 1 2133 225 90 54 chr10 27131547 27131818 -113184947 - MLT1E1 LTR MaLR 0 654 394 180 0 0 0 chr10 27131818 27131838 -113184927 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 2133 225 90 54 chr10 27131838 27132197 -113184568 - MLT1E1 LTR MaLR -260 394 1 26 64 0 0 chr10 27132436 27132483 -113184282 + AT_rich Low_complexity Low_complexity 1 47 0 1343 170 6 112 chr10 27132583 27132895 -113183870 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr10 27132906 27132930 -113183835 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 615 275 18 92 chr10 27132982 27133218 -113183547 + L3 LINE CR1 668 873 -704 1562 224 75 14 chr10 27133218 27133589 -113183176 - MSTD LTR MaLR 0 396 3 615 275 18 92 chr10 27133589 27133687 -113183078 + L3 LINE CR1 873 977 -600 287 83 0 0 chr10 27133728 27133764 -113183001 - U2 snRNA snRNA -152 36 1 426 242 70 53 chr10 27134570 27134855 -113181910 - L1M4 LINE L1 -915 5231 4942 1070 232 13 18 chr10 27134867 27134949 -113181816 - MER58A DNA MER1_type -2196 224 143 2055 142 39 94 chr10 27134949 27135407 -113181358 - Tigger2a DNA MER2_type -1 433 1 1070 232 13 18 chr10 27135407 27135548 -113181217 - MER58A DNA MER1_type -2277 143 2 625 270 146 28 chr10 27135550 27136329 -113180436 - L1M4 LINE L1 -1208 4938 4068 542 320 75 72 chr10 27136511 27137126 -113179639 - L1MDa LINE L1 -5413 1117 501 786 171 89 13 chr10 27137504 27137662 -113179103 + MER5B DNA MER1_type 9 178 0 26 0 0 0 chr10 27138414 27138440 -113178325 + AT_rich Low_complexity Low_complexity 1 26 0 31 26 0 0 chr10 27138922 27138960 -113177805 + AT_rich Low_complexity Low_complexity 1 38 0 1398 199 33 13 chr10 27139005 27139311 -113177454 - L1MC1 LINE L1 -6 6327 6016 2361 221 58 2 chr10 27139312 27139917 -113176848 - L1MC1 LINE L1 -812 5334 4696 2071 128 7 0 chr10 27140097 27140385 -113176380 + AluSx SINE Alu 1 290 -22 840 268 51 104 chr10 27140542 27141113 -113175652 + MLT1H1 LTR MaLR 1 555 0 330 336 31 87 chr10 27141553 27141978 -113174787 + MLT1I LTR MaLR 1 401 -8 272 347 0 0 chr10 27142297 27142392 -113174373 + L2 LINE L2 2664 2758 -556 244 295 134 13 chr10 27142653 27142802 -113173963 + L2 LINE L2 3118 3284 -29 2151 123 40 40 chr10 27143489 27143864 -113172901 - THE1C LTR MaLR 0 375 1 27 49 0 0 chr10 27144159 27144200 -113172565 + AT_rich Low_complexity Low_complexity 1 41 0 219 319 149 0 chr10 27145836 27145930 -113170835 + MIR SINE MIR 25 132 -76 369 326 43 0 chr10 27145948 27146086 -113170679 - MIR SINE MIR -8 254 111 220 362 111 39 chr10 27147182 27147489 -113169276 + L2 LINE L2 2961 3289 -24 1640 139 87 4 chr10 27147737 27148003 -113168762 - AluSq SINE Alu -25 288 1 242 256 26 13 chr10 27148477 27148555 -113168210 + CT-rich Low_complexity Low_complexity 1 79 0 281 263 71 50 chr10 27149040 27149139 -113167626 - MIR SINE MIR -77 131 31 2033 131 10 3 chr10 27149736 27150041 -113166724 - AluJb SINE Alu -5 307 1 23 0 0 0 chr10 27150196 27150219 -113166546 + AT_rich Low_complexity Low_complexity 1 23 0 341 236 210 19 chr10 27151274 27151431 -113165334 + MER5A DNA MER1_type 3 189 0 505 333 14 0 chr10 27151807 27151954 -113164811 - MIR3 SINE MIR -27 181 33 1606 191 0 20 chr10 27153011 27153315 -113163450 - AluJo SINE Alu -14 298 1 219 36 0 0 chr10 27153534 27153562 -113163203 + (GA)n Simple_repeat Simple_repeat 2 29 0 1136 307 95 39 chr10 27153775 27154737 -113162028 + L1MEd LINE L1 332 1387 -4902 203 111 37 37 chr10 27154786 27154840 -113161925 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 297 169 0 0 chr10 27155206 27155265 -113161500 + (CTG)n Simple_repeat Simple_repeat 2 60 0 380 295 31 8 chr10 27155270 27155399 -113161366 - MIR SINE MIR -11 251 120 3273 104 21 4 chr10 27155430 27155909 -113160856 - LTR15 LTR ERV1 -6 487 1 248 293 35 0 chr10 27155912 27155970 -113160795 - MIR SINE MIR -199 63 4 21 57 0 0 chr10 27156022 27156057 -113160708 + AT_rich Low_complexity Low_complexity 1 35 0 920 273 22 20 chr10 27156226 27156582 -113160183 + L1MEd LINE L1 2157 2513 -3616 348 127 0 0 chr10 27156771 27156826 -113159939 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1987 154 3 0 chr10 27156917 27157216 -113159549 + AluSq SINE Alu 1 300 -13 310 254 138 35 chr10 27157268 27157345 -113159420 + L1MEd LINE L1 2843 2911 -3218 1793 150 0 48 chr10 27157345 27157658 -113159107 + AluJb SINE Alu 1 298 -14 310 254 138 35 chr10 27157658 27157891 -113158874 + L1MEd LINE L1 2911 3185 -2944 1346 249 27 22 chr10 27158044 27158450 -113158315 - L1ME1 LINE L1 -18 6148 5741 2318 265 39 16 chr10 27158625 27159840 -113156925 - L1MEc LINE L1 -3230 3310 2091 243 88 0 0 chr10 27159840 27159874 -113156891 + (TG)n Simple_repeat Simple_repeat 1 34 0 2318 265 39 16 chr10 27159874 27159929 -113156836 - L1MEc LINE L1 -4449 2091 2039 303 185 0 0 chr10 27159952 27160006 -113156759 - MLT2B3 LTR ERVL 0 520 467 220 194 0 0 chr10 27160006 27160042 -113156723 + polypyrimidine Low_complexity Low_complexity 2 37 0 189 0 0 0 chr10 27160065 27160086 -113156679 + (TATG)n Simple_repeat Simple_repeat 4 24 0 2095 214 85 19 chr10 27160109 27160582 -113156183 - MLT2B3 LTR ERVL -46 508 5 508 211 30 23 chr10 27160586 27160719 -113156046 - L1MEc LINE L1 -4561 1979 1846 490 239 181 32 chr10 27160904 27161092 -113155673 - MIR SINE MIR 0 262 47 342 340 77 13 chr10 27161158 27161314 -113155451 - MIR3 SINE MIR -34 174 9 266 353 42 8 chr10 27161843 27161962 -113154803 + MIR SINE MIR 16 138 -70 351 274 12 0 chr10 27161982 27162066 -113154699 - L2 LINE L2 0 3272 3188 2148 80 42 0 chr10 27162275 27162563 -113154202 - AluY SINE Alu -11 300 1 31 76 0 0 chr10 27163747 27163813 -113152952 + AT_rich Low_complexity Low_complexity 1 66 0 2147 117 3 3 chr10 27166592 27166890 -113149875 - AluSg SINE Alu -12 298 1 21 57 0 0 chr10 27167190 27167225 -113149540 + AT_rich Low_complexity Low_complexity 1 35 0 580 325 105 18 chr10 27167904 27168246 -113148519 + L2 LINE L2 2369 2740 -574 2522 53 0 0 chr10 27168260 27168559 -113148206 - AluY SINE Alu -12 299 1 327 318 162 0 chr10 27168614 27168768 -113147997 + L2 LINE L2 2881 3059 -213 1157 260 46 48 chr10 27168782 27169239 -113147526 - LTR16A1 LTR ERVL -1 456 1 216 161 65 16 chr10 27169284 27169346 -113147419 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 221 0 35 0 chr10 27169346 27169375 -113147390 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 973 256 14 5 chr10 27169481 27169696 -113147069 - MIR SINE MIR 0 262 46 337 359 57 13 chr10 27170013 27170172 -113146593 + MIR3 SINE MIR 32 197 -11 483 207 25 25 chr10 27170748 27170869 -113145896 + MIR SINE MIR 24 144 -118 21 0 0 0 chr10 27171573 27171594 -113145171 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 27171894 27171918 -113144847 + AT_rich Low_complexity Low_complexity 1 24 0 2458 209 38 12 chr10 27171979 27172557 -113144208 - L1MA9 LINE L1 -39 6273 5681 1058 178 0 0 chr10 27172667 27172841 -113143924 - AluSx SINE Alu -4 308 135 445 123 0 0 chr10 27172841 27172906 -113143859 - AluSx SINE Alu -248 65 1 1933 169 43 62 chr10 27172907 27173422 -113143343 - MLT1D LTR MaLR 0 505 1 234 302 0 0 chr10 27173644 27173707 -113143058 + GA-rich Low_complexity Low_complexity 2 64 0 208 299 0 52 chr10 27174097 27174174 -113142591 + MIR3 SINE MIR 120 192 -16 207 341 110 0 chr10 27174189 27174271 -113142494 - MER5B DNA MER1_type -5 173 83 1214 234 54 28 chr10 27174590 27174907 -113141858 - L1ME2 LINE L1 -10 6154 5826 2352 71 0 34 chr10 27174907 27175229 -113141536 - AluY SINE Alu 0 311 1 1214 234 54 28 chr10 27175229 27175265 -113141500 - L1ME2 LINE L1 -338 5826 5792 686 211 83 39 chr10 27175401 27175581 -113141184 - MER58C DNA MER1_type 0 215 28 463 161 92 0 chr10 27175597 27175684 -113141081 + MER3 DNA MER1_type 1 95 -114 336 361 147 12 chr10 27175684 27175936 -113140829 + L3 LINE CR1 252 537 -1040 960 177 59 30 chr10 27176001 27176204 -113140561 - MER3 DNA MER1_type 0 209 1 545 277 6 60 chr10 27176204 27176370 -113140395 + L3 LINE CR1 584 740 -837 354 234 0 32 chr10 27176507 27176601 -113140164 - MER103 DNA DNA -45 121 31 391 318 28 28 chr10 27176606 27176782 -113139983 + L3 LINE CR1 780 955 -622 215 143 61 0 chr10 27176947 27176996 -113139769 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 629 294 70 0 chr10 27177235 27177422 -113139343 + MIR SINE MIR 5 204 -58 254 214 129 14 chr10 27177513 27177583 -113139182 - MIR SINE MIR -112 150 73 328 311 68 40 chr10 27178149 27178297 -113138468 - L2 LINE L2 -5 3267 3116 229 289 0 0 chr10 27179384 27179436 -113137329 + (CATA)n Simple_repeat Simple_repeat 2 53 0 243 88 0 0 chr10 27179825 27179859 -113136906 + (CA)n Simple_repeat Simple_repeat 1 34 0 299 85 21 0 chr10 27179859 27179906 -113136859 + (GA)n Simple_repeat Simple_repeat 1 48 0 1742 164 31 0 chr10 27180216 27180503 -113136262 - AluJo SINE Alu -13 299 4 1102 258 87 49 chr10 27180516 27180991 -113135774 - L1MC4a LINE L1 -1929 5879 5379 1905 73 55 0 chr10 27180991 27181263 -113135502 - L1PA10 LINE L1 -11 6157 5871 1102 258 87 49 chr10 27181263 27181342 -113135423 - L1MC4a LINE L1 -2429 5379 5304 4539 197 37 17 chr10 27181366 27182424 -113134341 - L1MB3 LINE L1 0 6183 5073 2493 116 6 6 chr10 27182424 27182786 -113133979 + THE1B LTR MaLR 1 362 -2 4539 197 37 17 chr10 27182786 27183418 -113133347 - L1MB3 LINE L1 -1110 5073 4455 500 288 98 80 chr10 27183429 27184469 -113132296 - L1MC4a LINE L1 -855 5291 4270 4774 216 52 25 chr10 27184469 27185884 -113130881 - Charlie1a DNA MER1_type 0 1455 3 500 288 98 80 chr10 27185884 27186065 -113130700 - L1MC4a LINE L1 -1876 4270 4094 1466 29 0 0 chr10 27186065 27186238 -113130527 + L1PA4 LINE L1 5977 6149 -6 500 288 98 80 chr10 27186238 27186927 -113129838 - L1MC4a LINE L1 -2052 4094 3332 2216 90 0 0 chr10 27186927 27187229 -113129536 - AluSc SINE Alu 0 304 3 500 288 98 80 chr10 27187229 27187571 -113129194 - L1MC4a LINE L1 -2814 3332 2997 21 36 0 0 chr10 27187591 27187619 -113129146 + AT_rich Low_complexity Low_complexity 1 28 0 235 155 0 35 chr10 27187661 27187719 -113129046 + (TA)n Simple_repeat Simple_repeat 2 57 0 258 32 0 0 chr10 27187732 27187763 -113129002 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 285 113 40 chr10 27187791 27188271 -113128494 - L1MC4a LINE L1 -3321 2825 2311 991 295 8 11 chr10 27188732 27189102 -113127663 - HAL1b LINE L1 -735 613 245 1804 240 86 31 chr10 27189104 27189653 -113127112 - MER119 DNA MER1_type 0 583 5 384 209 0 0 chr10 27189691 27189782 -113126983 + (TATG)n Simple_repeat Simple_repeat 3 93 0 2113 108 14 14 chr10 27189884 27190180 -113126585 - AluSx SINE Alu -16 296 1 1959 119 22 0 chr10 27190547 27190855 -113125910 - AluSx SINE Alu 0 314 1 198 324 14 14 chr10 27191583 27191657 -113125108 + L2 LINE L2 2694 2767 -547 305 330 74 80 chr10 27191938 27192289 -113124476 + L2 LINE L2 2915 3263 -9 411 301 18 9 chr10 27193883 27193996 -113122769 + MIR3 SINE MIR 54 167 -41 267 31 0 0 chr10 27194478 27194510 -113122255 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2504 59 3 0 chr10 27194932 27195239 -113121526 + AluY SINE Alu 1 308 -3 10321 120 16 28 chr10 27195339 27195674 -113121091 - Tigger1 DNA MER2_type -788 1630 1293 2318 80 3 0 chr10 27195674 27195976 -113120789 - AluY SINE Alu -8 303 1 10321 120 16 28 chr10 27195976 27196360 -113120405 - Tigger1 DNA MER2_type -1125 1293 906 1390 194 45 21 chr10 27196360 27196649 -113120116 - AluJo SINE Alu -16 296 1 10321 120 16 28 chr10 27196649 27197576 -113119189 - Tigger1 DNA MER2_type -1512 906 2 1872 164 0 34 chr10 27197652 27197975 -113118790 - AluJo SINE Alu 0 312 1 3449 118 13 85 chr10 27198121 27198300 -113118465 - L1MA6 LINE L1 -388 5912 5722 198 0 0 0 chr10 27198300 27198322 -113118443 + (CA)n Simple_repeat Simple_repeat 2 23 0 3449 118 13 85 chr10 27198322 27198774 -113117991 - L1MA6 LINE L1 -578 5722 5343 2636 104 46 22 chr10 27198774 27199189 -113117576 - L1PA11 LINE L1 0 6174 5750 3449 118 13 85 chr10 27199189 27199355 -113117410 - L1MA6 LINE L1 -957 5343 5167 1759 177 54 3 chr10 27199352 27199685 -113117080 + L1MA7 LINE L1 5909 6258 -33 * 395 208 52 0 chr10 27199685 27199762 -113117003 + Tigger5 DNA MER2_type 1 81 -2242 298 270 79 22 chr10 27199762 27199851 -113116914 - Tigger5 DNA MER2_type -6 2317 2224 * 394 268 0 0 chr10 27199830 27199912 -113116853 + Tigger5 DNA MER2_type 2242 2323 0 275 167 0 0 chr10 27199912 27199960 -113116805 + L1MA9 LINE L1 6265 6312 0 291 85 0 0 chr10 27200077 27200124 -113116641 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr10 27200691 27200716 -113116049 + AT_rich Low_complexity Low_complexity 1 25 0 2177 123 0 0 chr10 27201477 27201779 -113114986 + AluSq SINE Alu 1 302 -11 2435 50 0 13 chr10 27201982 27202283 -113114482 + AluY SINE Alu 1 297 -14 987 73 46 20 chr10 27202842 27202993 -113113772 - L1PA2 LINE L1 0 6155 6001 1454 178 22 38 chr10 27203752 27204067 -113112698 - AluJo SINE Alu 0 312 3 274 234 218 0 chr10 27204646 27204770 -113111995 + L1MC5 LINE L1 7757 7907 -54 254 222 222 32 chr10 27204931 27205057 -113111708 - MER5B DNA MER1_type -28 150 1 251 287 35 11 chr10 27205245 27205332 -113111433 - MIR3 SINE MIR -7 201 113 204 297 0 68 chr10 27205358 27205432 -113111333 - L2 LINE L2 -9 3263 3195 301 226 97 73 chr10 27207483 27207607 -113109158 + MIR SINE MIR 80 206 -56 21 0 0 0 chr10 27207825 27207846 -113108919 + AT_rich Low_complexity Low_complexity 1 21 0 505 279 49 22 chr10 27208692 27208875 -113107890 + MIR SINE MIR 75 262 0 1109 279 122 28 chr10 27209225 27209759 -113107006 + MLT1L LTR MaLR 15 598 -17 2646 254 72 13 chr10 27209977 27211159 -113105606 - L1ME3A LINE L1 0 6170 4917 334 134 96 4 chr10 27211215 27211454 -113105311 + (TA)n Simple_repeat Simple_repeat 1 260 0 842 230 70 33 chr10 27211522 27211822 -113104943 - L1ME3A LINE L1 -1424 4722 4412 430 202 50 0 chr10 27211838 27211937 -113104828 - FLAM_A SINE Alu -2 140 37 793 288 77 9 chr10 27212071 27212540 -113104225 - L1M LINE L1 -743 5403 4917 325 126 96 18 chr10 27212595 27212865 -113103900 + (TA)n Simple_repeat Simple_repeat 1 291 0 2087 230 94 62 chr10 27212932 27213253 -113103512 - L1M4 LINE L1 -1424 4722 4413 1420 146 146 22 chr10 27213253 27213521 -113103244 - AluJo SINE Alu 0 302 2 2087 230 94 62 chr10 27213521 27214141 -113102624 - L1M4 LINE L1 -1733 4413 3750 249 198 17 112 chr10 27214406 27214522 -113102243 - L1ME LINE L1 -5926 144 40 697 316 90 32 chr10 27214698 27215531 -113101234 + L1MEc LINE L1 940 1820 -4576 210 37 0 0 chr10 27216071 27216098 -113100667 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 327 213 66 16 chr10 27216729 27216851 -113099914 - L1ME4a LINE L1 -16 6105 5978 364 348 79 17 chr10 27217818 27217996 -113098769 - MER5A DNA MER1_type 0 189 1 1237 103 82 30 chr10 27218508 27218741 -113098024 - L1MA8 LINE L1 -4 6287 6043 1998 169 35 3 chr10 27218998 27219341 -113097424 - MLT1A1 LTR MaLR -11 354 1 25 0 0 0 chr10 27220687 27220712 -113096053 + AT_rich Low_complexity Low_complexity 1 25 0 585 318 23 18 chr10 27221097 27221314 -113095451 + MIR SINE MIR 8 225 -37 1605 237 53 12 chr10 27221325 27221742 -113095023 - MLT1D LTR MaLR -66 439 6 360 0 0 0 chr10 27222632 27222672 -113094093 + (CA)n Simple_repeat Simple_repeat 2 41 0 2478 175 55 17 chr10 27223231 27223628 -113093137 - MLT1D LTR MaLR -8 497 78 1789 158 158 13 chr10 27223628 27224002 -113092763 + MSTA LTR MaLR 1 428 0 2478 175 55 17 chr10 27224002 27224079 -113092686 - MLT1D LTR MaLR -427 78 5 24 53 0 0 chr10 27224485 27224523 -113092242 + AT_rich Low_complexity Low_complexity 1 38 0 183 80 0 0 chr10 27225935 27225960 -113090805 + (T)n Simple_repeat Simple_repeat 1 25 0 1801 92 4 0 chr10 27225966 27226227 -113090538 - L1PA11 LINE L1 0 6174 5913 532 15 0 0 chr10 27227662 27227727 -113089038 + L1PA3 LINE L1 6091 6155 0 1077 195 90 67 chr10 27227922 27228312 -113088453 - L1 LINE L1 -3826 2502 2098 1991 135 3 3 chr10 27228312 27228608 -113088157 + AluSq SINE Alu 3 298 -15 1077 195 90 67 chr10 27228608 27228743 -113088022 - L1 LINE L1 -4230 2098 1968 6688 178 60 7 chr10 27228854 27230482 -113086283 - L1 LINE L1 -4083 1245 3 2059 148 19 23 chr10 27230530 27230893 -113085872 + THE1B LTR MaLR 1 426 -2 11152 106 6 1 chr10 27230895 27232468 -113084297 + THE1B-int LTR MaLR 1 1580 0 2288 115 19 22 chr10 27232468 27232833 -113083932 + THE1B LTR MaLR 1 364 0 1310 238 36 30 chr10 27232833 27233300 -113083465 - L1M4 LINE L1 -3270 2876 2407 4695 200 33 26 chr10 27233323 27233371 -113083394 - L1MB2 LINE L1 -9 6162 6116 6689 81 12 11 chr10 27233371 27235089 -113081676 - L1PA7 LINE L1 -14 6140 4425 4695 200 33 26 chr10 27235089 27236927 -113079838 - L1MB2 LINE L1 -55 6116 4261 443 238 145 25 chr10 27236918 27237153 -113079612 - L1M4 LINE L1 -3717 2429 2167 * 260 233 0 41 chr10 27237207 27237280 -113079485 - L3 LINE CR1 -557 1020 951 728 212 31 62 chr10 27237490 27237526 -113079239 + MIR SINE MIR 65 101 -161 2885 142 27 8 chr10 27237526 27238004 -113078761 - LTR45B LTR ERV1 0 489 3 728 212 31 62 chr10 27238004 27238160 -113078605 + MIR SINE MIR 101 251 -11 574 333 42 17 chr10 27238101 27238338 -113078427 - MIR SINE MIR -6 256 14 * 286 312 178 32 chr10 27238334 27238677 -113078088 - L3 LINE CR1 -878 699 307 * 24 0 0 0 chr10 27239153 27239177 -113077588 + AT_rich Low_complexity Low_complexity 1 24 0 1107 272 137 41 chr10 27239873 27240528 -113076237 - L1ME3A LINE L1 -42 6128 5537 1866 139 11 41 chr10 27240528 27240896 -113075869 - L1MA8 LINE L1 -4 6287 5931 1107 272 137 41 chr10 27240896 27241748 -113075017 - L1ME3A LINE L1 -633 5537 4468 438 309 55 14 chr10 27241754 27241971 -113074794 - L1ME3A LINE L1 -3623 2523 2298 674 292 46 29 chr10 27242140 27242380 -113074385 + LTR16C LTR ERVL 248 491 0 2216 133 37 0 chr10 27242390 27242797 -113073968 + L1PA13 LINE L1 5189 5607 -556 * 17720 27 3 0 chr10 27242795 27245477 -113071288 - L1P LINE L1 -1517 4629 1941 7503 29 7 1 chr10 27245477 27246961 -113069804 + L1PA3 LINE L1 4664 6152 -3 3024 140 29 4 chr10 27246999 27247491 -113069274 + L1PA13 LINE L1 5593 6096 -67 1034 282 65 23 chr10 27247570 27248272 -113068493 - L1MEc LINE L1 -3035 3180 2449 3925 234 60 30 chr10 27248350 27249672 -113067093 - L1MD2 LINE L1 -18 6410 5012 183 42 0 0 chr10 27249672 27249696 -113067069 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3925 234 60 30 chr10 27249696 27250347 -113066418 - L1MD2 LINE L1 -1416 5012 4382 657 291 31 88 chr10 27250657 27251271 -113065494 - L1MD2 LINE L1 -4586 1810 1232 3869 161 37 1 chr10 27251461 27252190 -113064575 - L1MB7 LINE L1 0 6184 5430 453 211 109 51 chr10 27252244 27252419 -113064346 - L1ME3A LINE L1 -76 6094 5910 502 259 118 84 chr10 27252581 27252882 -113063883 - L1MEc LINE L1 -4169 2227 1903 1683 195 13 10 chr10 27252882 27253189 -113063576 - AluJo SINE Alu -4 308 1 502 259 118 84 chr10 27253189 27253361 -113063404 - L1MEc LINE L1 -4493 1903 1738 413 224 12 0 chr10 27254185 27254270 -113062495 - L2 LINE L2 -1 3312 3227 413 264 88 50 chr10 27254448 27254630 -113062135 - L1ME3A LINE L1 -221 5949 5761 226 333 12 0 chr10 27254645 27254729 -113062036 - L1ME3A LINE L1 -516 5648 5564 308 396 55 0 chr10 27254824 27255006 -113061759 - L2 LINE L2 -616 2698 2507 840 296 137 48 chr10 27255119 27255806 -113060959 - L2 LINE L2 -1159 2155 1408 2095 118 0 16 chr10 27256918 27257233 -113059532 - AluSg SINE Alu 0 310 1 740 219 168 0 chr10 27257968 27258164 -113058601 + MIR SINE MIR 31 259 -3 7229 197 34 28 chr10 27259058 27261610 -113055155 - L1MB2 LINE L1 -4 6167 3612 2312 92 0 3 chr10 27261610 27261903 -113054862 - AluSc SINE Alu -15 294 3 7229 197 34 28 chr10 27261903 27262127 -113054638 - L1MB2 LINE L1 -2559 3612 3391 7039 183 91 45 chr10 27262742 27263942 -113052823 + MER52A LTR ERV1 50 1194 -561 2241 152 25 0 chr10 27263942 27264297 -113052468 + THE1B LTR MaLR 1 364 0 10565 112 8 31 chr10 27264297 27265914 -113050851 + THE1B-int LTR MaLR 1 1580 0 2500 129 3 0 chr10 27265914 27266277 -113050488 + THE1B LTR MaLR 1 364 0 7039 183 91 45 chr10 27266277 27266611 -113050154 + MER52A LTR ERV1 1193 1755 0 22 35 0 0 chr10 27266618 27266647 -113050118 + AT_rich Low_complexity Low_complexity 1 29 0 255 314 49 10 chr10 27267603 27267705 -113049060 + L2 LINE L2 2052 2157 -1157 374 219 0 0 chr10 27267705 27267778 -113048987 - 7SK RNA RNA 0 193 121 709 198 0 16 chr10 27267814 27267940 -113048825 - 7SK RNA RNA -68 125 2 1272 261 41 26 chr10 27267942 27268333 -113048432 + L2 LINE L2 2143 2539 -775 295 359 35 28 chr10 27268349 27268491 -113048274 - MIR SINE MIR -113 149 7 27 0 0 0 chr10 27268960 27268987 -113047778 + AT_rich Low_complexity Low_complexity 1 27 0 203 203 0 51 chr10 27269435 27269494 -113047271 + T-rich Low_complexity Low_complexity 3 58 0 270 81 0 0 chr10 27269589 27269626 -113047139 + (CCTA)n Simple_repeat Simple_repeat 2 38 0 584 286 0 0 chr10 27270465 27270612 -113046153 - MLT1E LTR MaLR -9 645 499 770 164 0 0 chr10 27270613 27270729 -113046036 + FLAM_C SINE Alu 1 116 -17 905 275 57 45 chr10 27270904 27271302 -113045463 - MLT1E LTR MaLR -146 447 45 237 135 0 0 chr10 27271811 27271848 -113044917 + MLT1E3 LTR MaLR 1 37 -617 1473 235 27 46 chr10 27271942 27272388 -113044377 + MLT1E3 LTR MaLR 130 624 0 2231 136 3 45 chr10 27272989 27273080 -113043685 + MER1B DNA MER1_type 1 94 -2618 1881 163 70 14 chr10 27273080 27273435 -113043330 - THE1C LTR MaLR 0 375 1 2231 136 3 45 chr10 27273435 27273697 -113043068 + MER1B DNA MER1_type 94 339 0 242 236 55 0 chr10 27274079 27274134 -113042631 + L2 LINE L2 3256 3313 0 2938 221 31 36 chr10 27276044 27276843 -113039922 + L1MC4 LINE L1 7239 8033 -9 32 0 0 0 chr10 27277004 27277036 -113039729 + AT_rich Low_complexity Low_complexity 1 32 0 263 288 12 0 chr10 27277189 27277269 -113039496 - L1ME LINE L1 -280 5841 5761 21 36 0 0 chr10 27279363 27279391 -113037374 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr10 27279592 27279627 -113037138 + (T)n Simple_repeat Simple_repeat 1 35 0 585 287 61 81 chr10 27280252 27280560 -113036205 + LTR16C LTR ERVL 97 397 -94 3543 120 43 26 chr10 27280560 27281183 -113035582 - LTR24C LTR ERV1 -1 634 1 585 287 61 81 chr10 27281183 27281268 -113035497 + LTR16C LTR ERVL 397 482 -9 1582 308 70 0 chr10 27281469 27282014 -113034751 + L2 LINE L2 2155 2737 -577 195 42 0 0 chr10 27282014 27282038 -113034727 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 198 365 107 6 chr10 27283748 27283907 -113032858 + L2 LINE L2 1535 1709 -1605 2076 125 0 0 chr10 27284436 27284738 -113032027 + AluSg SINE Alu 3 304 0 268 284 0 45 chr10 27284740 27284828 -113031937 - MIR3 SINE MIR -46 162 79 2540 62 3 0 chr10 27285752 27286061 -113030704 + AluY SINE Alu 1 310 -1 1640 158 3 53 chr10 27287131 27287434 -113029331 + AluJo SINE Alu 3 290 -22 478 295 8 0 chr10 27288959 27289088 -113027677 + MIR SINE MIR 14 143 -119 1800 190 58 15 chr10 27289094 27289796 -113026969 + L1MB7 LINE L1 4968 5704 -480 1691 166 36 15 chr10 27289797 27290128 -113026637 + L1MB7 LINE L1 5845 6182 -2 193 328 0 0 chr10 27290137 27290204 -113026561 + MIR SINE MIR 146 212 -50 273 243 57 0 chr10 27290800 27290870 -113025895 - MIR SINE MIR -57 151 78 27 62 0 0 chr10 27292644 27292692 -113024073 + AT_rich Low_complexity Low_complexity 1 48 0 9731 62 96 5 chr10 27292865 27294214 -113022551 - L1P LINE L1 -4674 1472 1 3417 178 53 6 chr10 27294546 27295113 -113021652 - L1MB4 LINE L1 -109 6071 5468 230 0 33 0 chr10 27295113 27295143 -113021622 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3417 178 53 6 chr10 27295143 27295303 -113021462 - L1MB4 LINE L1 -712 5468 5317 760 161 8 0 chr10 27295310 27295440 -113021325 - L1MC1 LINE L1 -195 6138 6008 * 3746 211 19 31 chr10 27295437 27295623 -113021142 - L1MB4 LINE L1 -814 5332 5145 1605 192 3 14 chr10 27295623 27295910 -113020855 - AluJo SINE Alu -28 284 1 3746 211 19 31 chr10 27295910 27296658 -113020107 - L1MB4 LINE L1 -1001 5145 4409 1613 128 57 60 chr10 27297722 27298004 -113018761 + MER1B DNA MER1_type 59 339 0 2368 99 14 3 chr10 27298179 27298523 -113018242 - L1PB1 LINE L1 -15 6136 5789 202 182 0 0 chr10 27298523 27298556 -113018209 + (TG)n Simple_repeat Simple_repeat 1 33 0 269 168 0 84 chr10 27298556 27298651 -113018114 + L1MC4 LINE L1 6617 6703 -1339 3146 106 18 4 chr10 27298661 27298854 -113017911 - L1PB1 LINE L1 -369 5782 5593 8524 46 11 5 chr10 27298854 27300707 -113016058 - L1PA6 LINE L1 -8 6146 4281 3146 106 18 4 chr10 27300707 27300968 -113015797 - L1PB1 LINE L1 -558 5593 5322 755 245 39 0 chr10 27300975 27301179 -113015586 + L1PB1 LINE L1 5104 5315 -831 242 285 16 114 chr10 27301484 27301607 -113015158 + MIR SINE MIR 35 145 -117 4668 151 30 0 chr10 27301607 27302368 -113014397 - Tigger1 DNA MER2_type -1631 787 4 24 0 0 0 chr10 27304207 27304231 -113012534 + AT_rich Low_complexity Low_complexity 1 24 0 14175 23 12 0 chr10 27305046 27307471 -113009294 + L1PA3 LINE L1 3717 6152 -3 284 307 122 34 chr10 27307757 27307995 -113008770 + L1MC/D LINE L1 5491 5749 -2059 293 339 38 60 chr10 27308226 27308409 -113008356 - L2 LINE L2 0 3313 3135 386 316 98 35 chr10 27308487 27308661 -113008104 - MIR SINE MIR -77 185 1 427 107 27 0 chr10 27308989 27309064 -113007701 + (TG)n Simple_repeat Simple_repeat 1 77 0 667 175 0 36 chr10 27309145 27309310 -113007455 - FLAM_C SINE Alu 0 161 2 2208 75 3 11 chr10 27309355 27309661 -113007104 + AluY SINE Alu 1 304 0 422 275 118 34 chr10 27310161 27310339 -113006426 + MIR SINE MIR 1 193 -69 798 326 73 78 chr10 27310592 27311572 -113005193 - L2 LINE L2 -2 3311 2346 984 188 0 0 chr10 27311583 27311764 -113005001 + MER53 DNA DNA 9 189 0 589 336 97 17 chr10 27311776 27312187 -113004578 - L2 LINE L2 -985 2329 1886 1948 154 0 0 chr10 27312710 27313003 -113003762 - AluJb SINE Alu -17 295 3 242 287 35 0 chr10 27313035 27313122 -113003643 + L1M4 LINE L1 4910 4999 -1147 341 364 90 42 chr10 27313153 27313744 -113003021 - L2 LINE L2 -1407 1907 1289 1249 198 4 0 chr10 27314352 27314584 -113002181 + MER58B DNA MER1_type 98 330 -11 2070 132 41 41 chr10 27314584 27314948 -113001817 - THE1B LTR MaLR 0 364 1 209 388 9 26 chr10 27317067 27317183 -112999582 + MER5A DNA MER1_type 76 189 0 583 303 89 88 chr10 27317943 27318570 -112998195 + L2 LINE L2 2231 2861 -453 1297 203 0 76 chr10 27318570 27318752 -112998013 - AluJo SINE Alu -20 292 143 2138 130 0 0 chr10 27318752 27319052 -112997713 + AluSx SINE Alu 1 300 -12 1297 203 0 76 chr10 27319052 27319185 -112997580 - AluJo SINE Alu -169 143 1 583 303 89 88 chr10 27319185 27319286 -112997479 + L2 LINE L2 2861 2960 -354 744 215 141 16 chr10 27319439 27319630 -112997135 - MER20 DNA MER1_type -2 217 3 296 245 21 0 chr10 27319714 27319808 -112996957 + (TG)n Simple_repeat Simple_repeat 2 97 0 26 30 0 0 chr10 27321034 27321067 -112995698 + AT_rich Low_complexity Low_complexity 1 33 0 239 385 0 10 chr10 27321203 27321299 -112995466 - MIR SINE MIR -162 100 6 2572 216 45 35 chr10 27321663 27321951 -112994814 - L1ME2 LINE L1 0 6164 5880 2492 62 0 19 chr10 27321951 27322260 -112994505 - AluY SINE Alu -8 303 1 2572 216 45 35 chr10 27322260 27322707 -112994058 - L1ME2 LINE L1 -284 5880 5422 24 32 0 0 chr10 27322835 27322866 -112993899 + AT_rich Low_complexity Low_complexity 1 31 0 324 298 37 21 chr10 27322895 27323086 -112993679 - L1ME4a LINE L1 -275 5846 5653 300 298 166 33 chr10 27323121 27323302 -112993463 - L1ME4a LINE L1 -1959 4187 3983 1496 129 99 1 chr10 27323398 27323719 -112993046 + L1MA8 LINE L1 5917 6277 -23 180 179 0 0 chr10 27324231 27324270 -112992495 + T-rich Low_complexity Low_complexity 1 39 0 518 312 51 59 chr10 27324875 27325346 -112991419 - L1MC/D LINE L1 -2007 5801 5335 292 208 150 92 chr10 27325546 27325666 -112991099 + MIR SINE MIR 104 230 -32 240 59 0 0 chr10 27325878 27325912 -112990853 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 828 308 113 9 chr10 27326731 27327187 -112989578 - L2 LINE L2 -63 3250 2745 603 278 139 21 chr10 27328495 27328776 -112987989 + L2 LINE L2 2995 3308 -5 1136 221 27 27 chr10 27330305 27330563 -112986202 + AluJo SINE Alu 3 260 -52 2077 148 0 0 chr10 27331102 27331399 -112985366 - AluSx SINE Alu -15 297 1 237 233 133 0 chr10 27331432 27331492 -112985273 + L2 LINE L2 3205 3272 0 531 225 92 21 chr10 27332124 27332266 -112984499 + MIR SINE MIR 17 168 -94 1347 205 0 30 chr10 27332367 27332635 -112984130 - AluJb SINE Alu -52 260 1 4435 148 19 23 chr10 27332982 27333843 -112982922 - L1MA9 LINE L1 -14 6298 5345 3675 144 25 6 chr10 27333893 27334560 -112982205 - L1MA9 LINE L1 -1168 4978 4299 234 151 0 57 chr10 27335033 27335086 -112981679 + CT-rich Low_complexity Low_complexity 5 54 0 211 264 0 0 chr10 27335188 27335257 -112981508 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 472 282 92 20 chr10 27335393 27335588 -112981177 - L2 LINE L2 -901 2413 2205 1787 104 3 74 chr10 27337285 27337583 -112979182 - AluSx SINE Alu -35 277 1 219 278 119 56 chr10 27339396 27339522 -112977243 + MIR3 SINE MIR 5 138 -70 480 277 165 11 chr10 27339537 27339725 -112977040 - MIR SINE MIR -3 259 43 2077 134 23 0 chr10 27341154 27341459 -112975306 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 27341499 27341529 -112975236 + AT_rich Low_complexity Low_complexity 1 30 0 15385 121 28 5 chr10 27341689 27342694 -112974071 + Tigger1 DNA MER2_type 1 982 -1436 2267 87 3 29 chr10 27342694 27343004 -112973761 - AluY SINE Alu -9 302 1 15385 121 28 5 chr10 27343004 27344360 -112972405 + Tigger1 DNA MER2_type 982 2416 -2 405 86 0 0 chr10 27344360 27344418 -112972347 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 197 349 159 20 chr10 27345454 27345649 -112971116 - MIR SINE MIR -25 237 16 748 223 26 56 chr10 27347055 27347288 -112969477 + LTR12 LTR ERV1 238 463 -251 216 0 0 0 chr10 27347750 27347774 -112968991 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 244 82 44 chr10 27347779 27347881 -112968884 - MER51D LTR ERV1 0 657 547 4745 127 34 8 chr10 27347881 27348640 -112968125 - MER4E LTR ERV1 0 779 1 228 244 82 44 chr10 27348640 27348672 -112968093 - MER51D LTR ERV1 -110 547 518 2797 149 54 31 chr10 27348712 27349284 -112967481 - LTR60 LTR ERV1 0 586 2 342 323 87 0 chr10 27349302 27349429 -112967336 + MIR SINE MIR 53 190 -72 304 311 119 90 chr10 27349821 27350065 -112966700 - L2 LINE L2 -49 3223 2973 2254 281 81 19 chr10 27350068 27350543 -112966222 + L2 LINE L2 2016 2563 -751 2446 85 3 0 chr10 27350543 27350850 -112965915 + AluY SINE Alu 1 308 -3 2254 281 81 19 chr10 27350850 27351176 -112965589 + L2 LINE L2 2563 2867 -447 996 195 147 51 chr10 27351262 27351595 -112965170 + MLT1A1 LTR MaLR 1 365 0 213 247 86 49 chr10 27351908 27351989 -112964776 + L2 LINE L2 2649 2732 -582 16586 37 5 0 chr10 27351997 27354797 -112961968 - L1PA5 LINE L1 0 6154 3350 1534 217 56 13 chr10 27354904 27355277 -112961488 + MLT1D LTR MaLR 3 391 -114 457 319 7 7 chr10 27355657 27355795 -112960970 + L2 LINE L2 3134 3271 -1 287 337 36 98 chr10 27357557 27357750 -112959015 - MIR3 SINE MIR -7 201 21 304 183 56 0 chr10 27357977 27358048 -112958717 + MER116 DNA Mariner 6 80 0 1226 203 8 4 chr10 27358326 27358563 -112958202 - L1MC4 LINE L1 -1013 7029 6792 279 54 0 0 chr10 27359525 27359562 -112957203 + (TG)n Simple_repeat Simple_repeat 2 38 0 4020 46 0 4 chr10 27359683 27360180 -112956585 - L1PA5 LINE L1 -4 6150 5656 544 215 54 34 chr10 27360182 27360387 -112956378 - HAL1b LINE L1 -311 1037 829 248 280 0 13 chr10 27360416 27360491 -112956274 - HAL1b LINE L1 -931 417 344 1890 106 8 0 chr10 27360493 27360749 -112956016 - AluSq SINE Alu -55 258 1 21 36 0 0 chr10 27360831 27360859 -112955906 + AT_rich Low_complexity Low_complexity 1 28 0 200 294 0 55 chr10 27361044 27361153 -112955612 + T-rich Low_complexity Low_complexity 3 105 0 2357 172 24 2 chr10 27361351 27361816 -112954949 - L1MB4 LINE L1 0 6180 5706 3355 214 69 12 chr10 27361841 27362606 -112954159 + MER54A LTR ERVL 93 901 0 1695 156 13 15 chr10 27362606 27362939 -112953826 - L1P2 LINE L1 -445 5709 5374 1581 211 3 7 chr10 27363223 27363517 -112953248 - AluJo SINE Alu -19 293 1 1402 255 59 15 chr10 27363635 27364027 -112952738 + L2 LINE L2 2135 2543 -771 464 260 80 47 chr10 27364176 27364326 -112952439 + L2 LINE L2 3158 3312 -1 597 330 25 13 chr10 27364705 27364941 -112951824 + L2 LINE L2 2804 3042 -271 1183 249 61 9 chr10 27366432 27366762 -112950003 + MLT1A1 LTR MaLR 1 347 -18 268 233 178 41 chr10 27367073 27367219 -112949546 + Charlie8 DNA MER1_type 75 240 -2177 523 247 190 6 chr10 27367237 27367411 -112949354 + MIR SINE MIR 1 206 -56 21 0 0 0 chr10 27367689 27367710 -112949055 + AT_rich Low_complexity Low_complexity 1 21 0 604 271 39 6 chr10 27367961 27368142 -112948623 - MLT1J LTR MaLR -324 187 1 353 294 56 0 chr10 27369496 27369656 -112947109 + L1ME LINE L1 4906 5074 -1072 289 291 40 0 chr10 27369755 27369885 -112946880 + L1ME LINE L1 5328 5462 -708 244 135 54 108 chr10 27370448 27370522 -112946243 + MLT1J2 LTR MaLR 68 137 -313 284 309 56 16 chr10 27370626 27370752 -112946013 + MLT1I LTR MaLR 277 407 -2 225 240 60 20 chr10 27371044 27371144 -112945621 - L1M4 LINE L1 -382 5796 5693 2167 144 46 8 chr10 27371145 27371513 -112945252 - MSTB1 LTR MaLR 0 432 51 183 80 0 0 chr10 27371619 27371644 -112945121 + (T)n Simple_repeat Simple_repeat 1 25 0 62 36 0 0 chr10 27372057 27372140 -112944625 + AT_rich Low_complexity Low_complexity 1 83 0 636 217 23 0 chr10 27373643 27373772 -112942993 + MIR SINE MIR 131 262 0 321 370 16 8 chr10 27374095 27374222 -112942543 + L2 LINE L2 2632 2759 -555 420 383 105 20 chr10 27374285 27374677 -112942088 + L2 LINE L2 2832 3256 -16 680 267 61 51 chr10 27375586 27375929 -112940836 - MLT1I LTR MaLR -18 391 1 28 29 0 0 chr10 27376750 27376785 -112939980 + AT_rich Low_complexity Low_complexity 1 35 0 1557 264 48 32 chr10 27376847 27377533 -112939232 - LTR51 LTR ERV1 -70 738 1 1041 178 13 49 chr10 27377634 27377859 -112938906 - MER20 DNA MER1_type 0 219 3 1022 255 134 86 chr10 27377942 27378333 -112938432 - MLT1G LTR MaLR 0 590 167 2144 124 10 0 chr10 27378333 27378632 -112938133 - AluSx SINE Alu -10 302 1 1022 255 134 86 chr10 27378632 27378808 -112937957 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 27379153 27379175 -112937590 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 14362 222 129 10 chr10 27379178 27383988 -112932777 - L1PB1 LINE L1 -3 6148 592 3512 17 2 0 chr10 27383988 27384396 -112932369 - L1PA2 LINE L1 -1 6154 5746 14362 222 129 10 chr10 27384396 27385068 -112931697 - L1PB1 LINE L1 -5559 592 1 1883 116 20 3 chr10 27385074 27385375 -112931390 - L1PBa LINE L1 -4950 1913 1608 449 88 0 0 chr10 27385376 27385433 -112931332 - U6 snRNA snRNA -1 106 50 403 352 62 6 chr10 27385731 27385893 -112930872 + MIR3 SINE MIR 21 191 -17 2500 180 165 10 chr10 27386654 27387247 -112929518 - MER76 LTR ERV -2 686 2 468 241 120 6 chr10 27387286 27387444 -112929321 + L1MB8 LINE L1 2510 2685 -3461 * 4970 183 61 34 chr10 27387420 27389485 -112927280 + L1MB8 LINE L1 4062 6172 -6 2195 117 10 3 chr10 27389502 27389809 -112926956 + AluSx SINE Alu 1 309 -3 630 285 58 23 chr10 27389855 27390164 -112926601 + L1ME3 LINE L1 47 366 -5704 567 254 105 28 chr10 27390176 27390424 -112926341 - LTR41 LTR ERVL -7 766 500 1598 238 149 13 chr10 27390552 27391263 -112925502 + L1ME3 LINE L1 2117 2924 -3156 235 284 118 0 chr10 27391365 27391467 -112925298 + L1ME3 LINE L1 3484 3597 -2483 1795 255 55 7 chr10 27391753 27392338 -112924427 + L1ME3 LINE L1 4262 4874 -1206 2153 91 14 0 chr10 27392381 27392668 -112924097 + AluY SINE Alu 1 291 -20 247 316 0 0 chr10 27393604 27393680 -112923085 + L1ME3 LINE L1 5825 5900 -196 195 243 71 29 chr10 27394499 27394569 -112922196 + MIR SINE MIR 50 122 -140 226 240 110 20 chr10 27395070 27395170 -112921595 - MIR SINE MIR -90 172 64 529 285 65 34 chr10 27396155 27396446 -112920319 - L1MC4a LINE L1 -1884 5924 5625 230 403 47 20 chr10 27396573 27396722 -112920043 + MER5B DNA MER1_type 23 175 -3 909 241 53 4 chr10 27397071 27397316 -112919449 + MIR SINE MIR 4 260 -2 887 126 24 0 chr10 27397632 27397759 -112919006 + AluSq/x SINE Alu 1 130 -182 261 0 0 0 chr10 27397759 27397788 -112918977 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1387 143 0 108 chr10 27397789 27398048 -112918717 + AluSx SINE Alu 57 287 -25 192 77 0 0 chr10 27398051 27398077 -112918688 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 1509 248 140 19 chr10 27398443 27398972 -112917793 + MLT1E LTR MaLR 1 593 0 404 336 14 7 chr10 27399253 27399399 -112917366 - MIR SINE MIR -114 148 2 31 99 0 0 chr10 27399479 27399580 -112917185 + AT_rich Low_complexity Low_complexity 1 101 0 331 314 83 0 chr10 27400460 27400581 -112916184 - MER91B DNA MER1_type -58 132 2 26 30 0 0 chr10 27400966 27400999 -112915766 + AT_rich Low_complexity Low_complexity 1 33 0 2224 112 147 5 chr10 27401051 27401426 -112915339 + MSTA LTR MaLR 1 428 0 192 77 0 0 chr10 27401618 27401644 -112915121 + (TTG)n Simple_repeat Simple_repeat 2 27 0 272 230 42 108 chr10 27401856 27401890 -112914875 - L1ME4a LINE L1 -153 5968 5933 783 214 0 88 chr10 27401890 27402082 -112914683 - FAM SINE Alu 0 175 1 272 230 42 108 chr10 27402082 27402260 -112914505 - L1ME4a LINE L1 -188 5933 5770 21 0 0 0 chr10 27402924 27402945 -112913820 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 27403036 27403058 -112913707 + AT_rich Low_complexity Low_complexity 1 22 0 7499 30 6 0 chr10 27403371 27404353 -112912412 + L1PA5 LINE L1 5159 6145 -9 297 0 0 0 chr10 27404353 27404386 -112912379 + (TA)n Simple_repeat Simple_repeat 2 34 0 333 321 98 5 chr10 27404412 27404596 -112912169 - L1ME4a LINE L1 -530 5634 5434 249 294 49 10 chr10 27404674 27404776 -112911989 - L1ME4a LINE L1 -837 5309 5204 232 139 76 13 chr10 27405231 27405310 -112911455 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 2390 83 3 3 chr10 27405857 27406159 -112910606 + AluSq SINE Alu 1 302 -11 2132 125 0 0 chr10 27406449 27406737 -112910028 - AluSx SINE Alu -24 288 1 1566 234 23 0 chr10 27406801 27407155 -112909610 - L1PB4 LINE L1 -8 6148 5787 269 282 14 0 chr10 27407701 27407772 -112908993 + MIR SINE MIR 86 157 -105 23 54 0 0 chr10 27407995 27408032 -112908733 + AT_rich Low_complexity Low_complexity 1 37 0 6624 64 2 0 chr10 27408032 27408876 -112907889 - L1PA7 LINE L1 -7 6147 5302 201 178 0 0 chr10 27409060 27409105 -112907660 + CT-rich Low_complexity Low_complexity 3 47 0 262 290 80 20 chr10 27409113 27409213 -112907552 - L2 LINE L2 -2 3270 3165 24863 37 0 0 chr10 27409659 27412697 -112904068 - L1P LINE L1 -1034 5112 2075 566 100 0 11 chr10 27412801 27412891 -112903874 + AluSg/x SINE Alu 219 307 -3 1366 148 48 65 chr10 27414595 27414750 -112902015 - AluJo SINE Alu -17 285 129 278 0 54 0 chr10 27414750 27414787 -112901978 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2596 17 0 14 chr10 27414787 27415081 -112901684 - AluYb8 SINE Alu -27 291 2 1366 148 48 65 chr10 27415081 27415214 -112901551 - AluJo SINE Alu -171 131 1 2084 110 55 58 chr10 27415689 27416054 -112900711 - THE1B LTR MaLR 0 364 1 193 362 0 0 chr10 27416866 27416924 -112899841 + MIR SINE MIR 21 78 -130 692 291 39 69 chr10 27418640 27419001 -112897764 - MER93a LTR ERV1 0 402 53 234 258 55 86 chr10 27419136 27419264 -112897501 - L2 LINE L2 -4 3268 3145 1818 181 0 0 chr10 27419551 27419855 -112896910 + AluSx SINE Alu 1 304 -8 2013 118 3 37 chr10 27420246 27420567 -112896198 - AluSg SINE Alu 0 310 1 3523 106 6 0 chr10 27420715 27421208 -112895557 - LOR1a LTR ERV1 0 497 2 877 272 19 38 chr10 27421959 27422224 -112894541 - MIR SINE MIR 0 262 3 192 222 79 32 chr10 27424090 27424153 -112892612 - L2 LINE L2 -1147 2167 2102 312 214 41 20 chr10 27424897 27424995 -112891770 - L1ME4a LINE L1 -53 6068 5969 593 213 73 0 chr10 27425009 27425145 -112891620 - MER103 DNA DNA -18 148 3 21 57 0 0 chr10 27428813 27428848 -112887917 + AT_rich Low_complexity Low_complexity 1 35 0 2252 165 57 23 chr10 27429479 27429951 -112886814 + L1MB7 LINE L1 5681 6168 -16 379 259 85 55 chr10 27429963 27430164 -112886601 - L2 LINE L2 -15 3298 3092 662 200 0 0 chr10 27430388 27430513 -112886252 + FAM SINE Alu 35 159 -26 231 211 0 0 chr10 27430537 27430632 -112886133 + (TA)n Simple_repeat Simple_repeat 2 96 0 196 354 105 79 chr10 27437873 27437989 -112878776 + L2 LINE L2 2897 3009 -263 389 212 44 66 chr10 27437989 27438061 -112878704 + MER94 DNA DNA 1 70 -64 1779 164 3 23 chr10 27438061 27438360 -112878405 + AluJo SINE Alu 1 293 -19 389 212 44 66 chr10 27438360 27438424 -112878341 + MER94 DNA DNA 70 134 0 196 354 105 79 chr10 27438424 27438660 -112878105 + L2 LINE L2 3009 3258 -14 2132 113 0 7 chr10 27439953 27440244 -112876521 + AluSq SINE Alu 1 289 -24 1991 157 0 3 chr10 27440402 27440708 -112876057 + AluJo SINE Alu 1 305 -7 270 369 89 0 chr10 27440730 27440887 -112875878 + MIR3 SINE MIR 36 206 -2 273 57 0 0 chr10 27440887 27440922 -112875843 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr10 27442159 27442184 -112874581 + AT_rich Low_complexity Low_complexity 1 25 0 1466 82 0 0 chr10 27442184 27442378 -112874387 - L1PA7 LINE L1 -4 6150 5957 2584 73 26 2 chr10 27442378 27442949 -112873816 + L1P3 LINE L1 5023 5603 -551 511 98 49 0 chr10 27442979 27443061 -112873704 - L1MA1 LINE L1 -6 7715 7630 14882 184 37 14 chr10 27443169 27450082 -112866683 - L1MA1 LINE L1 -405 7319 14 2020 153 7 0 chr10 27450093 27450394 -112866371 - AluSq SINE Alu -10 303 1 815 266 111 74 chr10 27450938 27451423 -112865342 + MLT1J LTR MaLR 3 505 -6 576 245 86 68 chr10 27451689 27451967 -112864798 - LTR26 LTR ERV1 0 727 348 970 183 58 144 chr10 27452443 27452755 -112864010 - LTR8 LTR ERV1 -436 255 1 28322 115 25 69 chr10 27453103 27459305 -112857460 + L1PA7 LINE L1 12 5923 -231 5216 54 9 1 chr10 27459305 27459956 -112856809 + L1PA7 LINE L1 5490 6147 -7 3385 140 25 27 chr10 27460501 27461131 -112855634 + L1PB4 LINE L1 5520 6148 -8 448 259 26 99 chr10 27461641 27461873 -112854892 + MLT1I LTR MaLR 194 408 -1 1901 162 17 28 chr10 27462088 27462114 -112854651 - L1PA15 LINE L1 -17 6148 6123 1917 161 0 3 chr10 27462114 27462405 -112854360 - AluJb SINE Alu -22 290 1 1901 162 17 28 chr10 27462405 27462737 -112854028 - L1PA15 LINE L1 -42 6123 5794 2244 88 115 6 chr10 27464064 27464404 -112852361 + MER51B LTR ERV1 1 377 0 817 121 0 0 chr10 27464700 27464816 -112851949 - AluJb SINE Alu -14 298 183 256 156 0 0 chr10 27464835 27464880 -112851885 + AluJb SINE Alu 67 111 -191 * 356 231 0 0 chr10 27464877 27464955 -112851810 - AluJ/FLAM SINE Alu -233 69 1 2016 153 0 0 chr10 27465896 27466184 -112850581 - AluSx SINE Alu -24 288 1 1834 167 0 0 chr10 27467157 27467444 -112849321 - AluJb SINE Alu -25 287 1 778 228 37 5 chr10 27468851 27469042 -112847723 + L1P LINE L1 4821 5021 -1125 2375 78 0 0 chr10 27469042 27469336 -112847429 + AluY SINE Alu 1 294 -17 778 228 37 5 chr10 27469336 27469359 -112847406 + L1P LINE L1 5021 5042 -1104 244 180 20 0 chr10 27469921 27469971 -112846794 + Alu SINE Alu 2 52 -250 236 96 115 0 chr10 27469971 27470048 -112846717 + Alu SINE Alu 245 327 0 214 314 26 85 chr10 27470048 27470201 -112846564 + MIR SINE MIR 20 163 -99 402 219 36 122 chr10 27470665 27470794 -112845971 - LTR41 LTR ERVL -10 763 669 1873 157 20 16 chr10 27470794 27471100 -112845665 + AluSx SINE Alu 1 307 -5 402 219 36 122 chr10 27471100 27471248 -112845517 - LTR41 LTR ERVL -104 669 510 306 190 117 61 chr10 27471513 27471676 -112845089 - LTR41 LTR ERVL -601 172 1 237 139 0 0 chr10 27471878 27471921 -112844844 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 435 307 139 36 chr10 27472410 27472853 -112843912 - L2 LINE L2 -5 3267 2716 883 255 56 4 chr10 27473472 27473703 -112843062 + MIR SINE MIR 10 252 -10 641 330 16 33 chr10 27474230 27474496 -112842269 - MIR SINE MIR 0 262 3 349 175 63 0 chr10 27476055 27476118 -112840647 + L2 LINE L2 3242 3308 -5 1198 41 0 0 chr10 27476396 27476543 -112840222 - L1PA4 LINE L1 -4 6151 6005 245 301 231 32 chr10 27477918 27478074 -112838691 + MIR3 SINE MIR 9 195 -13 269 281 0 49 chr10 27478386 27478468 -112838297 + L2 LINE L2 3236 3313 0 1183 239 82 31 chr10 27478565 27479054 -112837711 - MER113 DNA MER1_type? -3 518 5 624 193 40 62 chr10 27480581 27480757 -112836008 - MER97a DNA MER1_type? -722 172 1 343 141 71 10 chr10 27480798 27480897 -112835868 + GA-rich Low_complexity Low_complexity 4 108 0 6311 30 6 0 chr10 27480905 27481700 -112835065 - L1P LINE L1 -1385 4761 3962 21 0 0 0 chr10 27484083 27484104 -112832661 + AT_rich Low_complexity Low_complexity 1 21 0 2265 199 97 8 chr10 27484729 27485378 -112831387 - L1M4 LINE L1 -3189 3455 2749 363 296 126 0 chr10 27485389 27485588 -112831177 + L1ME4a LINE L1 5507 5730 -391 304 274 105 0 chr10 27485601 27485725 -112831040 + L1ME4a LINE L1 5798 5934 -187 2524 72 0 0 chr10 27486292 27486599 -112830166 - AluY SINE Alu 0 311 5 2919 258 70 8 chr10 27488143 27489308 -112827457 - L1M4 LINE L1 -2789 3357 2121 805 258 97 12 chr10 27489314 27489744 -112827021 - L1M4 LINE L1 -3828 2816 2357 2374 252 128 41 chr10 27489873 27490932 -112825833 - L1M4 LINE L1 -5380 1162 12 352 329 77 18 chr10 27491594 27491764 -112825001 + MIR3 SINE MIR 9 188 -20 5015 80 30 1 chr10 27491767 27492467 -112824298 - LTR30 LTR ERV1 -2 720 1 804 251 18 0 chr10 27493355 27493518 -112823247 - MER5A DNA MER1_type 0 189 24 561 324 119 60 chr10 27493691 27494624 -112822141 - L2 LINE L2 -452 2862 1875 248 286 0 0 chr10 27495900 27495956 -112820809 + L2 LINE L2 3205 3260 -12 2231 87 0 27 chr10 27496650 27496949 -112819816 + AluSx SINE Alu 5 295 -17 24 0 0 0 chr10 27496980 27497004 -112819761 + AT_rich Low_complexity Low_complexity 1 24 0 1071 158 6 0 chr10 27498363 27498534 -112818231 + FAM SINE Alu 1 172 -3 234 0 0 0 chr10 27500162 27500188 -112816577 + (A)n Simple_repeat Simple_repeat 1 26 0 2296 113 0 0 chr10 27500622 27500923 -112815842 + AluSg SINE Alu 3 303 -7 1082 161 0 0 chr10 27500936 27501097 -112815668 + AluSg/x SINE Alu 135 295 -15 857 202 16 16 chr10 27501427 27501615 -112815150 + MER5A DNA MER1_type 2 189 0 341 151 14 0 chr10 27502071 27502144 -112814621 - L1PB3 LINE L1 0 6154 6081 1826 114 23 8 chr10 27502245 27502507 -112814258 - AluSq SINE Alu -47 266 1 21 0 0 0 chr10 27502704 27502725 -112814040 + AT_rich Low_complexity Low_complexity 1 21 0 2220 120 0 0 chr10 27503154 27503462 -112813303 - AluSc SINE Alu 0 309 2 5011 84 3 0 chr10 27503722 27504380 -112812385 + PABL_A LTR ERV1 1 660 0 212 341 100 4 chr10 27504432 27504572 -112812193 + MIR SINE MIR 47 208 -54 758 186 0 0 chr10 27505228 27505357 -112811408 + FLAM_C SINE Alu 4 132 -1 359 305 11 46 chr10 27505582 27505738 -112811027 - MIR3 SINE MIR -14 194 44 411 283 110 7 chr10 27505828 27505973 -112810792 - MIR3 SINE MIR -8 200 41 690 197 54 27 chr10 27506017 27506164 -112810601 + L3 LINE CR1 244 394 -1183 278 211 253 21 chr10 27507004 27507099 -112809666 + L3 LINE CR1 558 674 -903 314 372 41 25 chr10 27507145 27507341 -112809424 + L3 LINE CR1 1377 1575 -2 568 329 104 37 chr10 27508180 27508701 -112808064 - L2 LINE L2 -223 3049 2491 1675 163 62 3 chr10 27509139 27509427 -112807338 - AluJo SINE Alu -7 305 1 29 0 0 0 chr10 27510232 27510261 -112806504 + AT_rich Low_complexity Low_complexity 1 29 0 493 293 39 30 chr10 27511278 27511613 -112805152 + L1ME4a LINE L1 5531 5868 -253 2465 126 40 26 chr10 27511755 27512177 -112804588 + MSTA LTR MaLR 1 428 0 738 266 28 20 chr10 27512229 27512481 -112804284 - MLT2F LTR ERVL -15 648 395 248 167 0 21 chr10 27512483 27512531 -112804234 + MLT1K LTR MaLR 540 586 -2 1613 198 7 3 chr10 27513182 27513485 -112803280 + AluJo SINE Alu 2 305 -7 749 58 0 10 chr10 27513989 27514093 -112802672 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 264 167 0 0 chr10 27514093 27514141 -112802624 + GA-rich Low_complexity Low_complexity 2 49 0 1049 114 12 0 chr10 27514150 27514317 -112802448 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 421 252 36 0 chr10 27515142 27515281 -112801484 - L1MA10 LINE L1 -9 6325 6182 229 294 18 18 chr10 27515726 27515835 -112800930 + GA-rich Low_complexity Low_complexity 3 111 0 2806 221 118 37 chr10 27516574 27517314 -112799451 - L1ME1 LINE L1 -55 6111 5433 2761 152 35 106 chr10 27517314 27518058 -112798707 - LTR8 LTR ERV1 0 691 1 2806 221 118 37 chr10 27518058 27518113 -112798652 - L1ME1 LINE L1 -733 5433 5384 915 212 0 0 chr10 27518113 27518278 -112798487 - FRAM SINE Alu 0 166 2 2806 221 118 37 chr10 27518278 27518687 -112798078 - L1ME1 LINE L1 -782 5384 5010 2355 109 64 12 chr10 27518687 27519091 -112797674 - MSTA LTR MaLR -3 425 1 2806 221 118 37 chr10 27519091 27519675 -112797090 - L1ME1 LINE L1 -1156 5010 4161 6755 146 9 7 chr10 27519694 27521788 -112794977 - L1MA2 LINE L1 -1 7722 5620 4472 188 58 21 chr10 27521794 27523084 -112793681 - L1MA2 LINE L1 -2807 4758 3415 * 8611 120 88 4 chr10 27523076 27523818 -112792947 - L1MA2 LINE L1 -5029 2536 1858 198 0 0 0 chr10 27523818 27523840 -112792925 + (TC)n Simple_repeat Simple_repeat 2 23 0 8611 120 88 4 chr10 27523840 27524475 -112792290 - L1MA2 LINE L1 -5707 1858 1043 402 105 18 0 chr10 27524607 27524664 -112792101 - AluSg/x SINE Alu -111 189 132 1116 128 0 21 chr10 27524664 27524852 -112791913 - AluSg/x SINE Alu -8 302 119 216 129 16 32 chr10 27525004 27525066 -112791699 + CT-rich Low_complexity Low_complexity 2 62 0 216 355 16 13 chr10 27525092 27525288 -112791477 + CT-rich Low_complexity Low_complexity 1 196 0 242 254 17 34 chr10 27525463 27525581 -112791184 + CT-rich Low_complexity Low_complexity 5 120 0 321 200 46 15 chr10 27526206 27526271 -112790494 - MER20 DNA MER1_type -152 67 1 429 286 71 0 chr10 27526271 27526425 -112790340 + L1MC4a LINE L1 5737 5901 -1907 945 172 51 59 chr10 27527002 27527258 -112789507 + pTR5 LTR ERV1 1774 2027 -411 352 202 32 21 chr10 27527260 27527354 -112789411 + LTR30 LTR ERV1 548 642 -80 1755 99 152 4 chr10 27527355 27527677 -112789088 + LTR12 LTR ERV1 375 714 0 2007 112 3 17 chr10 27527681 27527988 -112788777 + AluSx SINE Alu 1 303 0 216 321 12 12 chr10 27528104 27528188 -112788577 + MIR SINE MIR 8 91 -171 369 80 0 0 chr10 27528203 27528253 -112788512 + MADE1 DNA Mariner 25 74 -6 304 269 28 28 chr10 27528261 27528369 -112788396 + MIR SINE MIR 117 224 -38 30 97 0 0 chr10 27528959 27529052 -112787713 + AT_rich Low_complexity Low_complexity 1 93 0 1580 193 3 32 chr10 27529054 27529370 -112787395 - AluJo SINE Alu -5 307 1 1498 186 43 110 chr10 27529392 27530066 -112786699 + Zaphod DNA AcHobo 816 1444 -2587 295 258 15 0 chr10 27530064 27530130 -112786635 + Zaphod DNA AcHobo 3964 4030 -1 * 2534 111 5 39 chr10 27530366 27530797 -112785968 - L1P4 LINE L1 -462 5703 5288 318 26 0 0 chr10 27531001 27531040 -112785725 + (CA)n Simple_repeat Simple_repeat 2 40 0 378 293 132 43 chr10 27531041 27531413 -112785352 + HAL1b LINE L1 410 814 -534 192 295 0 16 chr10 27531456 27531517 -112785248 - MIR SINE MIR -16 246 187 554 173 144 0 chr10 27531796 27531900 -112784865 + Tigger1 DNA MER2_type 2299 2417 -1 2363 246 61 40 chr10 27531909 27532029 -112784736 + L1M4c LINE L1 356 472 -6070 2258 77 3 7 chr10 27532029 27532316 -112784449 + AluSc SINE Alu 1 286 -23 2363 246 61 40 chr10 27532316 27532938 -112783827 + L1M4c LINE L1 472 1113 -5429 539 226 99 28 chr10 27532946 27533158 -112783607 + L1M4c LINE L1 1536 1762 -4884 291 128 0 0 chr10 27533287 27533334 -112783431 - HERVH LTR ERV1 -2067 5646 5600 8263 112 2 1 chr10 27533335 27534519 -112782246 - HERVH LTR ERV1 -2287 4242 3962 21 0 0 0 chr10 27535249 27535270 -112781495 + AT_rich Low_complexity Low_complexity 1 21 0 181 198 22 0 chr10 27535482 27535573 -112781192 + A-rich Low_complexity Low_complexity 1 93 0 417 282 61 46 chr10 27535863 27536125 -112780640 + L1M4 LINE L1 3243 3508 -2638 227 123 41 14 chr10 27536275 27536348 -112780417 + (TA)n Simple_repeat Simple_repeat 1 75 0 521 267 77 12 chr10 27536418 27536665 -112780100 + L1M4 LINE L1 3718 3979 -2167 3795 173 41 2 chr10 27536851 27537487 -112779278 - L1M1 LINE L1 -6889 676 16 4647 254 64 14 chr10 27537510 27539638 -112777127 - L1MEc LINE L1 -1998 4217 2010 2877 300 88 25 chr10 27539639 27540430 -112776335 - L1MEc LINE L1 -4432 1964 1224 1907 130 3 50 chr10 27540430 27540764 -112776001 - AluSc SINE Alu 0 309 1 2877 300 88 25 chr10 27540764 27541769 -112774996 - L1MEc LINE L1 -5172 1224 55 1068 244 46 34 chr10 27542451 27543133 -112773632 + L1M4c LINE L1 1797 2578 -4068 272 46 132 34 chr10 27543140 27543201 -112773564 - MLT2A1 LTR ERVL 0 453 388 202 108 77 0 chr10 27543293 27543358 -112773407 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 2971 69 23 5 chr10 27543384 27543777 -112772988 - MLT2A1 LTR ERVL -44 400 1 4313 243 29 30 chr10 27543777 27545351 -112771414 + L1M4c LINE L1 2580 4152 -2492 1782 164 82 37 chr10 27545356 27545583 -112771182 + L1MC3 LINE L1 7358 7612 -173 2551 66 0 0 chr10 27545583 27545887 -112770878 + AluY SINE Alu 1 304 -7 1782 164 82 37 chr10 27545887 27546062 -112770703 + L1MC3 LINE L1 7612 7778 -7 1368 188 68 34 chr10 27546371 27546499 -112770266 + AluJo SINE Alu 3 125 -187 414 0 0 0 chr10 27546499 27546545 -112770220 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1368 188 68 34 chr10 27546545 27546709 -112770056 + AluJo SINE Alu 125 305 -7 716 61 0 10 chr10 27546726 27546825 -112769940 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 22 35 0 0 chr10 27547917 27547946 -112768819 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 27549770 27549815 -112766950 + AT_rich Low_complexity Low_complexity 1 45 0 2022 128 62 0 chr10 27550172 27550460 -112766305 - AluSx SINE Alu -6 306 1 1012 184 168 76 chr10 27550761 27551156 -112765609 - MLT2B1 LTR ERVL -53 501 1 2289 108 0 3 chr10 27551756 27552082 -112764683 - AluSq SINE Alu 0 313 1 454 245 63 106 chr10 27552095 27552426 -112764339 - L2 LINE L2 -64 3249 2933 3333 305 128 30 chr10 27552470 27552591 -112764174 - L2 LINE L2 0 3313 3205 2382 106 41 52 chr10 27552591 27552959 -112763806 + THE1B LTR MaLR 1 364 0 3333 305 128 30 chr10 27552959 27554605 -112762160 - L2 LINE L2 -108 3205 1279 2271 155 19 14 chr10 27554605 27554967 -112761798 + THE1B LTR MaLR 1 364 0 3333 305 128 30 chr10 27554967 27555342 -112761423 - L2 LINE L2 -2034 1279 942 2012 159 3 0 chr10 27555351 27555659 -112761106 + AluSx SINE Alu 1 309 -3 236 360 7 4 chr10 27556059 27556222 -112760543 + C-rich Low_complexity Low_complexity 2 276 0 183 158 12 37 chr10 27556233 27556315 -112760450 + (CAG)n Simple_repeat Simple_repeat 1 80 0 754 39 0 19 chr10 27556326 27556430 -112760335 + (GAA)n Simple_repeat Simple_repeat 1 102 0 209 306 0 0 chr10 27556533 27556582 -112760183 + polypyrimidine Low_complexity Low_complexity 3 51 0 937 108 0 14 chr10 27557558 27557697 -112759068 + LTR7 LTR ERV1 312 448 -2 1581 252 72 20 chr10 27557697 27558296 -112758469 + L1M4 LINE L1 4233 4862 -1284 456 213 110 8 chr10 27558763 27558890 -112757875 + MER39B LTR ERV1 5 144 -509 830 173 7 7 chr10 27558890 27559040 -112757725 + AluSq/x SINE Alu 1 150 -163 372 157 12 12 chr10 27559070 27559153 -112757612 + GA-rich Low_complexity Low_complexity 3 85 0 1019 88 18 12 chr10 27559153 27559324 -112757441 + (GGAA)n Simple_repeat Simple_repeat 4 175 0 399 262 25 0 chr10 27559398 27559520 -112757245 + MER39B LTR ERV1 137 261 -392 837 133 0 0 chr10 27559527 27559640 -112757125 - FLAM_C SINE Alu -16 117 5 2638 129 9 14 chr10 27559652 27560071 -112756694 + MER39B LTR ERV1 232 648 -5 2203 103 3 0 chr10 27560250 27560573 -112756192 - AluSx SINE Alu 0 324 1 494 228 12 18 chr10 27561168 27561339 -112755426 + CT-rich Low_complexity Low_complexity 4 173 0 2766 116 6 0 chr10 27561350 27561712 -112755053 + THE1B LTR MaLR 1 364 0 229 218 26 0 chr10 27561724 27561802 -112754963 + CT-rich Low_complexity Low_complexity 2 81 0 3115 167 78 15 chr10 27561879 27562485 -112754280 - LTR48B LTR ERV1 0 644 1 1798 102 110 0 chr10 27562592 27562884 -112753881 - AluSx SINE Alu 0 320 1 463 248 117 7 chr10 27563103 27563248 -112753517 + MIR SINE MIR 95 255 -7 1871 169 3 0 chr10 27563366 27563662 -112753103 - AluJo SINE Alu -15 297 1 1470 141 4 4 chr10 27563736 27563963 -112752802 + L1MA4A LINE L1 6066 6292 -11 2963 82 20 5 chr10 27564443 27564835 -112751930 + L1PA10 LINE L1 5767 6164 -4 192 200 0 0 chr10 27565326 27565386 -112751379 + A-rich Low_complexity Low_complexity 1 60 0 2169 199 28 114 chr10 27565451 27566120 -112750645 - LTR9 LTR ERV1 0 612 1 351 271 7 18 chr10 27566226 27566340 -112750425 - L1ME2 LINE L1 -163 6007 5895 647 197 78 0 chr10 27566436 27566578 -112750187 + L1M4 LINE L1 4699 4851 -1295 4915 169 19 29 chr10 27566582 27567870 -112748895 - L1MB4 LINE L1 0 6180 4907 486 190 30 30 chr10 27567874 27567974 -112748791 + L1M4 LINE L1 4844 4943 -1203 1252 127 24 19 chr10 27567994 27568199 -112748566 + THE1C LTR MaLR 111 316 -59 932 98 0 8 chr10 27568199 27568322 -112748443 + AluSq/x SINE Alu 1 122 -191 222 37 0 0 chr10 27568322 27568349 -112748416 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 546 61 0 0 chr10 27568349 27568415 -112748350 + THE1C LTR MaLR 308 373 -2 2393 112 0 0 chr10 27568471 27568783 -112747982 + AluSx SINE Alu 1 312 0 4408 212 46 16 chr10 27568804 27570547 -112746218 + L1MB5 LINE L1 4364 6165 -9 525 276 16 0 chr10 27570531 27570723 -112746042 + L1M4 LINE L1 5135 5329 -817 * 1126 230 23 68 chr10 27570728 27571080 -112745685 + L1M4 LINE L1 14 349 -6193 15063 121 34 1 chr10 27571080 27573317 -112743448 + Tigger1 DNA MER2_type 1 2309 -109 1813 163 3 3 chr10 27573317 27573606 -112743159 - AluJo SINE Alu -13 299 11 243 344 200 0 chr10 27574948 27575073 -112741692 - L2 LINE L2 0 3272 3123 238 280 189 7 chr10 27575149 27575292 -112741473 - MIR3 SINE MIR -13 195 27 2646 84 55 3 chr10 27575323 27575667 -112741098 + THE1B LTR MaLR 3 364 0 940 238 14 19 chr10 27576123 27576333 -112740432 + MER63A DNA MER1_type 2 210 0 3832 100 22 0 chr10 27576537 27577038 -112739727 + MER75 DNA T2_type 1 512 -2 1307 207 78 15 chr10 27577381 27577437 -112739328 + MLT1A1 LTR MaLR 11 62 -303 4490 80 2 18 chr10 27577437 27578000 -112738765 - MER41A LTR ERV1 0 554 1 1307 207 78 15 chr10 27578000 27578277 -112738488 + MLT1A1 LTR MaLR 62 365 0 3004 120 87 4 chr10 27578452 27578912 -112737853 - MER41E LTR ERV1 0 512 15 2773 174 29 57 chr10 27579648 27580264 -112736501 + LTR9 LTR ERV1 14 612 0 183 156 0 0 chr10 27580643 27580675 -112736090 + (TG)n Simple_repeat Simple_repeat 2 33 0 216 311 155 0 chr10 27583390 27583493 -112733272 + MIR3 SINE MIR 84 202 -6 329 316 76 13 chr10 27584042 27584200 -112732565 - MIR SINE MIR -47 215 48 1570 153 96 3 chr10 27584302 27584584 -112732181 + AluSq SINE Alu 1 308 -5 1130 60 0 78 chr10 27584642 27584808 -112731957 + AluY SINE Alu 1 153 -158 2664 66 0 6 chr10 27584810 27585159 -112731606 - LTR7 LTR ERV1 -2 448 102 1792 94 64 0 chr10 27585161 27585427 -112731338 - HERVH LTR ERV1 -109 7604 7322 1348 117 42 9 chr10 27585425 27585638 -112731127 - HERVH LTR ERV1 -1894 5819 5600 * 4234 145 14 3 chr10 27585639 27586294 -112730471 - HERVH LTR ERV1 -2564 5149 4488 10327 168 61 60 chr10 27586296 27590287 -112726478 - HERVH LTR ERV1 -3720 3993 1 3417 60 0 70 chr10 27590289 27590771 -112725994 - LTR7 LTR ERV1 -2 448 1 926 117 14 0 chr10 27590794 27590939 -112725826 + AluY SINE Alu 157 303 -8 198 276 31 61 chr10 27590988 27591086 -112725679 + L2 LINE L2 3125 3219 -94 261 195 0 0 chr10 27591087 27591128 -112725637 + MER63 DNA MER1_type 1 41 -1020 229 196 43 0 chr10 27591178 27591224 -112725541 + MER63 DNA MER1_type 985 1032 -28 265 222 222 0 chr10 27591253 27591334 -112725431 + L2 LINE L2 3212 3310 -3 3102 131 9 11 chr10 27591381 27591531 -112725234 + LTR39 LTR ERV1 1 150 -633 1876 227 44 75 chr10 27591531 27592162 -112724603 - LTR9 LTR ERV1 0 612 1 3102 131 9 11 chr10 27592162 27592476 -112724289 + LTR39 LTR ERV1 150 464 -319 17180 101 24 25 chr10 27592672 27595338 -112721427 - HERVH LTR ERV1 -5051 2662 1 2872 95 92 5 chr10 27595340 27595752 -112721013 - LTR7 LTR ERV1 -2 448 1 3893 227 97 35 chr10 27595752 27597225 -112719540 - L1M4 LINE L1 -1907 4239 2675 322 133 100 0 chr10 27597231 27597291 -112719474 - MLT1B LTR MaLR 0 390 325 2213 118 10 0 chr10 27597291 27597597 -112719168 + AluSx SINE Alu 1 309 -3 481 175 50 0 chr10 27597981 27598061 -112718704 + MER2 DNA MER2_type 1 84 -261 1299 138 57 29 chr10 27598152 27598398 -112718367 + MER2 DNA MER2_type 93 345 0 2078 121 3 0 chr10 27598420 27598760 -112718005 + AluSq SINE Alu 1 341 0 2107 97 3 17 chr10 27599013 27599332 -112717433 - AluSq SINE Alu 0 315 1 1923 134 8 85 chr10 27599925 27600291 -112716474 - MER44D DNA MER2_type -1 608 1 2927 128 16 5 chr10 27600339 27600762 -112716003 + MSTA LTR MaLR 1 428 0 1543 131 29 48 chr10 27600812 27601219 -112715546 + MLT1C LTR MaLR 1 390 0 230 229 66 0 chr10 27601448 27601509 -112715256 - MIR3 SINE MIR -36 172 108 2488 114 48 11 chr10 27601672 27602023 -112714742 + THE1B LTR MaLR 1 364 0 2093 138 0 3 chr10 27602201 27602506 -112714259 + AluSc SINE Alu 1 304 -5 1759 208 54 3 chr10 27602645 27603016 -112713749 + MLT1B LTR MaLR 1 390 0 456 19 0 0 chr10 27603195 27603248 -112713517 + (CA)n Simple_repeat Simple_repeat 2 54 0 2281 183 105 19 chr10 27603721 27604186 -112712579 + MLT1D LTR MaLR 1 505 0 1584 135 15 132 chr10 27605229 27605570 -112711195 - AluJo SINE Alu -1 301 1 472 304 31 6 chr10 27606418 27606579 -112710186 + MIR SINE MIR 12 176 -86 331 73 0 0 chr10 27606705 27606746 -112710019 - MSTA LTR MaLR 0 426 386 2291 99 3 13 chr10 27606746 27607058 -112709707 + AluSc SINE Alu 1 309 0 1970 150 94 19 chr10 27607078 27607451 -112709314 - MSTA LTR MaLR -27 401 1 491 241 80 55 chr10 27608036 27608112 -112708653 - MIR SINE MIR -3 259 186 1983 115 45 3 chr10 27608112 27608398 -112708367 - AluSx SINE Alu -6 306 9 491 241 80 55 chr10 27608398 27608520 -112708245 - MIR SINE MIR -76 186 56 971 232 231 17 chr10 27608602 27608659 -112708106 - MLT1F1 LTR MaLR -8 559 516 2242 98 0 3 chr10 27608659 27608956 -112707809 + AluSc SINE Alu 4 299 -10 971 232 231 17 chr10 27608956 27609355 -112707410 - MLT1F1 LTR MaLR -51 516 1 567 128 47 0 chr10 27609527 27609613 -112707152 + FLAM_A SINE Alu 36 125 -17 1205 136 121 0 chr10 27609775 27609974 -112706791 - AluSg/x SINE Alu -5 305 83 2051 109 13 7 chr10 27610707 27611011 -112705754 + AluSx SINE Alu 1 306 -6 2261 110 0 0 chr10 27611664 27611964 -112704801 + AluSq SINE Alu 1 300 -13 1796 266 67 19 chr10 27611970 27612593 -112704172 - MER115 DNA AcHobo -40 653 1 275 219 0 41 chr10 27612942 27613015 -112703750 + L2 LINE L2 2794 2863 -451 218 122 14 54 chr10 27613195 27613269 -112703496 + (CCCCCG)n Simple_repeat Simple_repeat 5 75 0 1154 197 12 51 chr10 27613410 27613664 -112703101 + LTR39 LTR ERV1 532 775 -8 187 347 0 20 chr10 27614178 27614227 -112702538 + L2 LINE L2 3136 3183 -89 675 273 108 0 chr10 27614557 27614733 -112702032 + MIR SINE MIR 17 211 -51 1714 171 0 54 chr10 27614739 27615055 -112701710 + AluJb SINE Alu 1 299 -13 382 352 51 15 chr10 27615511 27615707 -112701058 + MIR3 SINE MIR 1 203 -5 1556 208 0 16 chr10 27615772 27616075 -112700690 - AluJo SINE Alu -14 298 1 2627 136 62 5 chr10 27616593 27616998 -112699767 - MSTA LTR MaLR 0 428 1 437 277 49 38 chr10 27617134 27617318 -112699447 - L1ME4a LINE L1 -1 6120 5935 1643 154 3 28 chr10 27617328 27617641 -112699124 - AluJo SINE Alu 0 310 5 2330 110 0 0 chr10 27617679 27617989 -112698776 - AluSx SINE Alu -2 310 1 671 260 29 65 chr10 27618029 27618138 -112698627 - L1ME4a LINE L1 -212 5909 5798 4306 157 27 10 chr10 27618138 27618832 -112697933 - MER39 LTR ERV1 -1 706 1 671 260 29 65 chr10 27618832 27619030 -112697735 - L1ME4a LINE L1 -323 5798 5613 2241 115 3 10 chr10 27621103 27621417 -112695348 - AluSx SINE Alu 0 312 1 2288 91 7 0 chr10 27622453 27622750 -112694015 - AluY SINE Alu -12 299 1 1876 128 14 27 chr10 27623449 27623745 -112693020 + AluSq SINE Alu 13 304 -9 676 141 19 19 chr10 27623759 27623915 -112692850 + GA-rich Low_complexity Low_complexity 1 156 0 359 303 74 6 chr10 27624577 27624739 -112692026 - MER5A DNA MER1_type -14 175 3 367 284 71 0 chr10 27625177 27625304 -112691461 - MIR SINE MIR -98 164 29 2250 128 3 0 chr10 27625415 27625727 -112691038 - AluSq SINE Alu 0 313 1 1617 160 34 37 chr10 27627296 27627624 -112689141 - AluJo SINE Alu 0 332 6 342 266 21 11 chr10 27628033 27628127 -112688638 + GA-rich Low_complexity Low_complexity 2 96 0 2319 166 41 37 chr10 27628193 27628276 -112688489 - L1MA4 LINE L1 -10 6290 6209 1695 153 7 24 chr10 27628276 27628564 -112688201 + AluJo SINE Alu 14 296 -16 2319 166 41 37 chr10 27628564 27628944 -112687821 - L1MA4 LINE L1 -91 6209 5825 222 227 0 0 chr10 27629603 27629647 -112687118 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 194 253 95 53 chr10 27629651 27629746 -112687019 - L2 LINE L2 -5 3267 3169 233 217 0 0 chr10 27629954 27630000 -112686765 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 2289 102 0 0 chr10 27630155 27630449 -112686316 + AluSx SINE Alu 1 294 -18 1340 203 72 51 chr10 27630573 27631001 -112685764 - LTR56 LTR ERV1 0 445 9 2176 157 49 45 chr10 27632018 27632465 -112684300 - MER67A LTR ERV1 0 543 95 3140 74 14 61 chr10 27632483 27632928 -112683837 + L1PA10 LINE L1 5730 6153 -15 776 125 0 0 chr10 27632962 27633074 -112683691 - MER67A LTR ERV1 -431 112 1 666 330 13 4 chr10 27633119 27633352 -112683413 + MIR SINE MIR 28 262 0 214 127 0 36 chr10 27633732 27633787 -112682978 + (CAAAG)n Simple_repeat Simple_repeat 2 54 0 1114 308 26 13 chr10 27633789 27634166 -112682599 - MLT1I LTR MaLR -2 407 26 2817 138 30 5 chr10 27634185 27634614 -112682151 - L1PA15 LINE L1 0 6165 5726 5886 83 17 1 chr10 27635028 27635812 -112680953 - L1PA10 LINE L1 0 6168 5373 411 244 148 0 chr10 27635915 27636050 -112680715 - MLT1J LTR MaLR -349 162 8 23 0 0 0 chr10 27636187 27636210 -112680555 + AT_rich Low_complexity Low_complexity 1 23 0 579 286 84 10 chr10 27636424 27636627 -112680138 + MIR SINE MIR 32 249 -13 207 0 0 0 chr10 27636637 27636660 -112680105 + (CA)n Simple_repeat Simple_repeat 1 23 0 228 67 0 0 chr10 27636884 27636914 -112679851 + (T)n Simple_repeat Simple_repeat 1 30 0 205 229 102 81 chr10 27636974 27637092 -112679673 + MIR SINE MIR 44 120 -88 21 0 0 0 chr10 27637108 27637129 -112679636 + AT_rich Low_complexity Low_complexity 1 21 0 243 282 12 12 chr10 27638007 27638092 -112678673 - MIR SINE MIR -26 236 152 201 74 0 0 chr10 27639143 27639170 -112677595 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1704 164 4 7 chr10 27639297 27639571 -112677194 + AluJo SINE Alu 16 288 -24 1523 202 50 23 chr10 27640224 27640566 -112676199 + LTR53 LTR ERVL 3 353 -166 889 174 30 42 chr10 27640795 27640870 -112675895 - FRAM SINE Alu -149 163 89 8843 71 4 6 chr10 27640870 27641943 -112674822 + MER11C LTR ERVK 1 1071 0 889 174 30 42 chr10 27641943 27642034 -112674731 - FRAM SINE Alu -223 89 1 1035 111 0 0 chr10 27642113 27642248 -112674517 + AluSq/x SINE Alu 1 135 -177 2173 132 3 0 chr10 27642248 27642558 -112674207 + AluSx SINE Alu 1 311 -1 297 264 198 14 chr10 27642614 27642775 -112673990 + MER5A DNA MER1_type 1 177 -1 281 33 33 49 chr10 27643416 27643477 -112673288 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1767 165 11 0 chr10 27643480 27643759 -112673006 - AluSx SINE Alu -30 282 1 224 239 0 0 chr10 27643798 27643844 -112672921 + MER5B DNA MER1_type 1 46 -132 240 219 0 0 chr10 27643880 27643921 -112672844 - MLT2B1 LTR ERVL 0 515 475 433 113 0 0 chr10 27643967 27644029 -112672736 + MADE1 DNA Mariner 1 62 -18 1472 238 92 7 chr10 27644036 27644469 -112672296 - MLT2B1 LTR ERVL -50 470 1 669 218 30 69 chr10 27644469 27644601 -112672164 + MIR SINE MIR 69 192 -70 1720 162 34 27 chr10 27644601 27644897 -112671868 + AluJb SINE Alu 1 298 -14 669 218 30 69 chr10 27644897 27644966 -112671799 + MIR SINE MIR 192 262 0 228 341 11 34 chr10 27645017 27645105 -112671660 - MER5A DNA MER1_type -98 91 6 852 321 84 26 chr10 27645143 27645716 -112671049 + Charlie7 DNA MER1_type 71 676 -1936 1514 156 4 42 chr10 27645757 27646020 -112670745 + AluJo SINE Alu 6 258 -54 315 0 0 0 chr10 27646024 27646059 -112670706 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 254 180 33 16 chr10 27646955 27647016 -112669749 - MER116 DNA Mariner 0 80 19 477 329 66 0 chr10 27647344 27647557 -112669208 + MARNA DNA Mariner 18 244 -342 1600 179 10 35 chr10 27648313 27648626 -112668139 - AluJo SINE Alu -7 305 1 718 201 8 8 chr10 27651150 27651284 -112665481 + AluJb SINE Alu 164 297 -15 1295 185 0 13 chr10 27651284 27651511 -112665254 + AluSx SINE Alu 1 224 -88 966 251 110 28 chr10 27651627 27651953 -112664812 - MLT1A1 LTR MaLR -12 353 1 739 288 88 23 chr10 27652495 27652881 -112663884 - LTR16C LTR ERVL -9 482 72 387 0 0 0 chr10 27654039 27654082 -112662683 + (A)n Simple_repeat Simple_repeat 1 43 0 392 254 45 30 chr10 27654805 27654939 -112661826 + MIR SINE MIR 109 244 -18 191 323 73 16 chr10 27655630 27655754 -112661011 + MER5A DNA MER1_type 40 170 -19 252 45 27 100 chr10 27656098 27656208 -112660557 + (TA)n Simple_repeat Simple_repeat 1 102 0 212 130 57 24 chr10 27656272 27656395 -112660370 + (TATAG)n Simple_repeat Simple_repeat 4 130 0 214 172 69 23 chr10 27656395 27656482 -112660283 + (CTATA)n Simple_repeat Simple_repeat 1 91 0 222 116 43 67 chr10 27656482 27656646 -112660119 + (TA)n Simple_repeat Simple_repeat 1 160 0 603 284 74 9 chr10 27656775 27657214 -112659551 - L2 LINE L2 -161 3152 2678 303 244 24 0 chr10 27657649 27657731 -112659034 + CT-rich Low_complexity Low_complexity 2 85 0 2094 194 35 30 chr10 27657893 27658356 -112658409 - MLT1D LTR MaLR -38 467 3 207 0 0 0 chr10 27658697 27658720 -112658045 + (A)n Simple_repeat Simple_repeat 1 23 0 321 278 19 28 chr10 27658855 27658963 -112657802 + MLT1G1 LTR MaLR 258 364 -231 2573 132 18 34 chr10 27661012 27661146 -112655619 - L1PA16 LINE L1 -13 6153 6018 2061 138 0 3 chr10 27661146 27661457 -112655308 - AluSq SINE Alu -3 310 1 2573 132 18 34 chr10 27661457 27661760 -112655005 - L1PA16 LINE L1 -148 6018 5723 899 296 157 14 chr10 27662306 27663091 -112653674 + L2 LINE L2 36 932 -2382 278 347 95 12 chr10 27663462 27663704 -112653061 - L2 LINE L2 -18 3254 2993 216 0 0 0 chr10 27664304 27664328 -112652437 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 333 62 0 0 chr10 27664327 27664375 -112652390 + (CA)n Simple_repeat Simple_repeat 1 48 0 244 205 26 39 chr10 27664582 27664660 -112652105 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 2369 149 41 12 chr10 27665835 27666251 -112650514 + MSTA LTR MaLR 1 428 0 1486 196 22 10 chr10 27666261 27666573 -112650192 + MLT1B LTR MaLR 1 316 -74 216 67 0 0 chr10 27716600 27716630 -112600135 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 673 255 109 5 chr10 27717748 27717932 -112598833 - MIR SINE MIR -6 256 54 328 390 17 0 chr10 27718082 27718200 -112598565 - L2 LINE L2 -10 3262 3143 628 248 0 0 chr10 27718387 27718508 -112598257 + FLAM_A SINE Alu 15 135 -7 274 300 20 67 chr10 27718974 27719124 -112597641 - MIR SINE MIR -74 188 46 2004 141 3 0 chr10 27719217 27719500 -112597265 + AluSx SINE Alu 1 284 -28 350 317 43 24 chr10 27719943 27720107 -112596658 + MIR SINE MIR 85 251 -11 1366 180 77 23 chr10 27721722 27722022 -112594743 + L1MC4 LINE L1 6782 7097 -945 2193 161 5 72 chr10 27722036 27722483 -112594282 + LTR9 LTR ERV1 1 417 -195 485 92 0 0 chr10 27722543 27722608 -112594157 - Alu SINE Alu -8 304 240 410 170 57 85 chr10 27722608 27722714 -112594051 + LTR9 LTR ERV1 515 779 0 2176 253 40 21 chr10 27722722 27722755 -112594010 + L1MC4 LINE L1 7266 7297 -745 4359 155 66 32 chr10 27722755 27723511 -112593254 - LTR39 LTR ERV1 -1 782 1 2176 253 40 21 chr10 27723511 27724148 -112592617 + L1MC4 LINE L1 7297 8042 0 345 314 175 11 chr10 27724286 27724560 -112592205 + L1ME4a LINE L1 5738 6056 -65 1334 233 149 20 chr10 27724790 27725280 -112591485 + LTR48B LTR ERV1 92 644 0 3000 83 92 2 chr10 27726342 27726753 -112590012 - LTR7 LTR ERV1 -2 448 1 366 284 117 12 chr10 27726773 27726935 -112589830 + MIR SINE MIR 84 262 0 856 300 163 33 chr10 27727084 27727943 -112588822 + L2 LINE L2 2358 3308 -5 668 251 70 70 chr10 27728507 27728806 -112587959 + LTR16A LTR ERVL 123 421 -29 2172 122 58 50 chr10 27728823 27729184 -112587581 + THE1B LTR MaLR 1 364 0 1823 160 39 15 chr10 27729506 27729837 -112586928 + MER44D DNA MER2_type 1 609 0 2396 125 36 23 chr10 27729852 27730237 -112586528 + MLT1B LTR MaLR 1 390 0 477 0 0 0 chr10 27730927 27730980 -112585785 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 34 24 0 0 chr10 27730980 27731021 -112585744 + AT_rich Low_complexity Low_complexity 1 41 0 5444 135 34 23 chr10 27731834 27732696 -112584069 - MER4D LTR ERV1 0 872 2 2754 117 0 14 chr10 27733030 27733399 -112583366 + THE1B LTR MaLR 1 364 0 10679 114 40 34 chr10 27733399 27734970 -112581795 + THE1B-int LTR MaLR 1 1580 0 2683 117 17 6 chr10 27734970 27735330 -112581435 + THE1B LTR MaLR 1 364 0 801 164 43 0 chr10 27736150 27736290 -112580475 - FRAM SINE Alu -30 146 1 2171 137 0 0 chr10 27736330 27736629 -112580136 - AluSx SINE Alu -13 299 1 188 268 0 0 chr10 27737460 27737501 -112579264 + MIR SINE MIR 196 236 -26 693 152 0 0 chr10 27737652 27737744 -112579021 + AluJ/FLAM SINE Alu 4 95 -217 403 241 12 0 chr10 27737744 27737906 -112578859 + (TA)n Simple_repeat Simple_repeat 1 164 0 2293 177 26 0 chr10 27738072 27738461 -112578304 - Tigger1 DNA MER2_type -2019 399 1 1046 155 0 0 chr10 27739782 27739943 -112576822 + FRAM SINE Alu 14 174 -2 3738 88 15 0 chr10 27740124 27740603 -112576162 + LTR19A LTR ERV1 1 486 0 2149 121 0 7 chr10 27742178 27742484 -112574281 - AluSx SINE Alu -8 304 1 236 314 0 0 chr10 27742602 27742688 -112574077 - L1MC4 LINE L1 -1342 6700 6615 207 0 0 0 chr10 27742742 27742765 -112574000 + (TATG)n Simple_repeat Simple_repeat 4 26 0 522 73 29 0 chr10 27743138 27743238 -112573527 - AluSg/x SINE Alu 0 312 211 1035 105 0 0 chr10 27743264 27743397 -112573368 - AluSq/x SINE Alu -179 133 1 618 178 10 0 chr10 27744009 27744110 -112572655 - U4 snRNA snRNA -1 144 43 531 140 0 90 chr10 27744151 27744251 -112572514 - FRAM SINE Alu -13 163 73 337 183 110 0 chr10 27744400 27744482 -112572283 + MIR SINE MIR 117 207 -55 2185 107 7 0 chr10 27744662 27744961 -112571804 + AluY SINE Alu 1 301 -10 4242 138 12 49 chr10 27744965 27745723 -112571042 + L1MB3 LINE L1 5444 6173 -10 345 284 0 0 chr10 27745913 27746001 -112570764 + MIR SINE MIR 60 147 -115 2278 87 0 3 chr10 27746053 27746353 -112570412 + AluY SINE Alu 1 299 -12 1594 158 3 76 chr10 27746353 27746653 -112570112 - AluJo SINE Alu -31 281 1 222 287 46 11 chr10 27746658 27746745 -112570020 + MIR SINE MIR 167 256 -6 231 175 48 0 chr10 27748734 27748797 -112567968 - HSMAR1 DNA Mariner 0 1287 1222 511 333 10 10 chr10 27748961 27749165 -112567600 - MIR SINE MIR 0 262 59 2996 159 62 18 chr10 27749244 27749742 -112567023 + MLT2B1 LTR ERVL 1 520 0 500 303 30 84 chr10 27750713 27750882 -112565883 + L2 LINE L2 2998 3142 -171 2269 95 0 31 chr10 27750882 27751199 -112565566 + AluSx SINE Alu 2 308 -4 500 303 30 84 chr10 27751199 27751362 -112565403 + L2 LINE L2 3142 3312 -1 287 317 96 36 chr10 27751609 27751776 -112564989 + MIR3 SINE MIR 4 180 -28 679 163 0 68 chr10 27751984 27752131 -112564634 - FLAM_C SINE Alu 0 143 7 2506 74 0 0 chr10 27752144 27752440 -112564325 - AluSg SINE Alu -14 296 1 1789 154 27 10 chr10 27752466 27752765 -112564000 - AluJb SINE Alu -8 304 1 225 213 66 16 chr10 27753723 27753784 -112562981 + L2 LINE L2 3250 3313 0 205 253 181 12 chr10 27754149 27754232 -112562533 + MIR SINE MIR 74 170 -92 646 115 244 17 chr10 27754763 27754899 -112561866 - AluSg/x SINE Alu -12 297 154 596 148 98 25 chr10 27754971 27755093 -112561672 + FLAM_A SINE Alu 11 141 -1 1814 176 83 13 chr10 27755096 27755597 -112561168 + LTR65 LTR ERV1 53 669 0 2256 89 3 13 chr10 27755688 27755990 -112560775 + AluSc SINE Alu 1 299 -10 1824 169 128 58 chr10 27755990 27756474 -112560291 - Charlie1b DNA MER1_type -5 518 1 2403 52 0 19 chr10 27756976 27757283 -112559482 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 27759879 27759916 -112556849 + AT_rich Low_complexity Low_complexity 1 37 0 349 329 7 27 chr10 27760705 27760851 -112555914 + MIR SINE MIR 106 248 -14 634 283 42 71 chr10 27760994 27761302 -112555463 + MER102b DNA MER1_type 37 335 -6 204 238 12 75 chr10 27761430 27761510 -112555255 - MIR SINE MIR -68 194 120 332 293 233 8 chr10 27762206 27762459 -112554306 - L2 LINE L2 -339 2975 2666 556 268 182 32 chr10 27763313 27764219 -112552546 - L1MEd LINE L1 -3044 3496 2440 598 279 97 22 chr10 27764543 27764986 -112551779 - L1MEd LINE L1 -794 2107 1533 473 297 57 0 chr10 27764988 27765163 -112551602 - LTR33A LTR ERVL 0 523 339 335 318 89 38 chr10 27765216 27765452 -112551313 - LTR33A LTR ERVL -267 256 9 307 296 0 23 chr10 27765456 27765544 -112551221 - L1MEd LINE L1 -5007 1523 1438 10400 203 63 40 chr10 27765551 27765949 -112550816 - L1MB3 LINE L1 -10 6984 6597 2007 157 0 0 chr10 27765949 27766255 -112550510 - AluSx SINE Alu -6 306 1 10400 203 63 40 chr10 27766255 27767722 -112549043 - L1MB3 LINE L1 -397 6597 5166 324 0 0 0 chr10 27767722 27767758 -112549007 + (TG)n Simple_repeat Simple_repeat 1 36 0 10400 203 63 40 chr10 27767758 27770663 -112546102 - L1MB3 LINE L1 -1828 5166 1972 2403 81 3 0 chr10 27770663 27770973 -112545792 + AluY SINE Alu 1 311 0 10400 203 63 40 chr10 27770973 27771353 -112545412 - L1MB3 LINE L1 -5022 1972 1602 2442 84 3 0 chr10 27771446 27771757 -112545008 - AluSp SINE Alu 0 313 2 1169 259 39 55 chr10 27771856 27772293 -112544472 - L2 LINE L2 -8 3305 2876 210 387 63 0 chr10 27772772 27772883 -112543882 + MIR SINE MIR 20 137 -71 262 296 16 80 chr10 27773877 27774002 -112542763 - L2 LINE L2 0 3313 3197 570 256 40 0 chr10 27774016 27774141 -112542624 - L2 LINE L2 0 3313 3184 815 320 56 70 chr10 27774308 27774876 -112541889 - L2 LINE L2 -1840 1474 915 193 240 0 20 chr10 27775772 27775822 -112540943 + MIR3 SINE MIR 132 180 -28 193 327 220 13 chr10 27778085 27778244 -112538521 + MIR3 SINE MIR 15 206 -2 1408 171 13 112 chr10 27779943 27780328 -112536437 - MLT1A1 LTR MaLR 0 365 19 1679 131 11 58 chr10 27780401 27780676 -112536089 - AluSx SINE Alu -17 295 34 5550 114 12 6 chr10 27780795 27781207 -112535558 - L1PA13 LINE L1 0 6163 5755 2133 125 54 23 chr10 27781207 27781560 -112535205 + THE1B LTR MaLR 1 364 0 5550 114 12 6 chr10 27781560 27782928 -112533837 - L1PA13 LINE L1 -408 5755 4379 1893 168 6 0 chr10 27782942 27783282 -112533483 - L1PA13 LINE L1 -1702 4444 4103 291 28 0 0 chr10 27783868 27783904 -112532861 + (TG)n Simple_repeat Simple_repeat 2 37 0 499 261 39 64 chr10 27784109 27784312 -112532453 - HAL1 LINE L1 -2299 208 11 2458 124 3 8 chr10 27784470 27784841 -112531924 - Tigger2a DNA MER2_type -25 419 51 664 165 0 9 chr10 27784820 27784935 -112531830 - Tigger2a DNA MER2_type -320 114 1 * 436 252 55 0 chr10 27788196 27788323 -112528442 + L1ME1 LINE L1 6029 6162 -4 23 33 0 0 chr10 27788415 27788445 -112528320 + AT_rich Low_complexity Low_complexity 1 30 0 5579 77 17 16 chr10 27788500 27789328 -112527437 - L1M1 LINE L1 -4251 3314 2486 3999 204 21 23 chr10 27789333 27790025 -112526740 - L1M1 LINE L1 -6681 884 193 189 0 0 0 chr10 27790025 27790046 -112526719 + (TC)n Simple_repeat Simple_repeat 2 22 0 3999 204 21 23 chr10 27790046 27790226 -112526539 - L1M1 LINE L1 -7372 193 14 479 332 92 11 chr10 27790353 27790636 -112526129 - L2 LINE L2 0 3313 3008 180 336 19 37 chr10 27790720 27790827 -112525938 + MER5A DNA MER1_type 84 188 -1 1395 287 93 58 chr10 27790869 27792122 -112524643 + L1ME LINE L1 36 1331 -5065 2149 268 81 24 chr10 27792163 27792702 -112524063 + L1ME LINE L1 1390 1897 -4318 3000 171 26 16 chr10 27792702 27793023 -112523742 + MER44D DNA MER2_type 2 387 -2100 2107 84 21 14 chr10 27793023 27793309 -112523456 + AluY SINE Alu 1 288 -23 3000 171 26 16 chr10 27793309 27793531 -112523234 + MER44D DNA MER2_type 387 605 0 2149 268 81 24 chr10 27793531 27795055 -112521710 + L1ME LINE L1 1897 3631 -2584 1007 318 22 5 chr10 27795491 27795894 -112520871 - L1M4c LINE L1 -4571 2388 1979 1004 140 0 0 chr10 27795896 27796053 -112520712 - AluSg/x SINE Alu 0 312 156 3472 208 66 31 chr10 27796054 27797054 -112519711 - L1M4c LINE L1 -4983 1976 903 4576 128 6 0 chr10 27797066 27797768 -112518997 - L1P LINE L1 -1512 4634 3929 3651 107 0 0 chr10 27797767 27798309 -112518456 + L1P LINE L1 4752 5293 -853 * 413 58 0 0 chr10 27798309 27798355 -112518410 + L1PA10 LINE L1 6100 6151 -17 1387 239 63 14 chr10 27798388 27798903 -112517862 - L1M4c LINE L1 -5963 896 2 621 251 95 74 chr10 27798912 27798966 -112517799 + L1ME LINE L1 3674 3725 -2490 2603 213 78 30 chr10 27798966 27799655 -112517110 - MER72 LTR ERV1 0 722 1 621 251 95 74 chr10 27799655 27800002 -112516763 + L1ME LINE L1 3725 4080 -2135 1137 272 45 0 chr10 27800057 27800370 -112516395 + L1ME LINE L1 5456 5782 -451 1976 133 65 31 chr10 27802311 27802663 -112514102 - THE1B LTR MaLR 0 364 1 792 219 91 0 chr10 27803804 27803991 -112512774 - MER20 DNA MER1_type -2 217 14 2423 66 0 3 chr10 27804020 27804325 -112512440 + AluY SINE Alu 1 304 -7 238 250 19 0 chr10 27804461 27804513 -112512252 + L2 LINE L2 3251 3303 -10 2384 137 119 7 chr10 27804774 27805238 -112511527 - L1MC2 LINE L1 0 6344 5831 1376 211 82 22 chr10 27805339 27805841 -112510924 + L1ME1 LINE L1 4960 5485 -681 950 157 63 26 chr10 27805828 27806019 -112510746 + L1PB1 LINE L1 3 200 -6663 * 13075 101 114 16 chr10 27806019 27807321 -112509444 + L1PB1 LINE L1 634 2226 -4637 2448 66 0 7 chr10 27807321 27807622 -112509143 - AluY SINE Alu -12 299 1 13075 101 114 16 chr10 27807622 27808449 -112508316 + L1PB1 LINE L1 2226 2971 -3892 1574 199 82 3 chr10 27808457 27808773 -112507992 + LTR9B LTR ERV1 304 644 0 10875 179 20 13 chr10 27808774 27809021 -112507744 + L1PB1 LINE L1 3510 3754 -3113 2002 152 0 0 chr10 27809021 27809324 -112507441 + AluSx SINE Alu 1 303 -9 10875 179 20 13 chr10 27809324 27809454 -112507311 + L1PB1 LINE L1 3754 3882 -2985 207 0 0 0 chr10 27809454 27809477 -112507288 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 10875 179 20 13 chr10 27809477 27812438 -112504327 + L1PB1 LINE L1 3882 6867 0 26 0 0 0 chr10 27812438 27812464 -112504301 + AT_rich Low_complexity Low_complexity 1 26 0 1260 236 60 23 chr10 27812464 27812874 -112503891 + L1ME1 LINE L1 5457 5892 -278 1612 141 56 30 chr10 27813006 27813310 -112503455 - AluJo SINE Alu 0 312 1 517 230 72 0 chr10 27813604 27813743 -112503022 + MIR SINE MIR 114 262 0 39052 51 3 1 chr10 27814583 27820283 -112496482 - L1PA5 LINE L1 -7 6147 435 880 293 69 18 chr10 27821594 27821986 -112494779 + MLT1L LTR MaLR 142 553 -62 2307 74 0 3 chr10 27822955 27823263 -112493502 - AluY SINE Alu 0 307 1 738 314 69 31 chr10 27823756 27824176 -112492589 + L2 LINE L2 2311 2746 -568 365 118 0 0 chr10 27824743 27824794 -112491971 - Alu SINE Alu -8 293 243 1860 135 168 11 chr10 27824844 27825214 -112491551 - MSTA LTR MaLR 0 428 1 1743 173 0 18 chr10 27825768 27826051 -112490714 + AluJo SINE Alu 4 281 -31 1804 174 142 74 chr10 27826318 27826888 -112489877 - LTR10A LTR ERV1 0 609 1 184 356 41 0 chr10 27827016 27827089 -112489676 + L2 LINE L2 3179 3254 -18 222 337 54 36 chr10 27827109 27827275 -112489490 + MIR SINE MIR 68 236 -26 286 250 16 0 chr10 27827321 27827385 -112489380 + L2 LINE L2 3248 3312 -1 4734 207 78 23 chr10 27828375 27829701 -112487064 + L1MC4 LINE L1 6473 7904 -138 201 147 0 0 chr10 27829741 27829775 -112486990 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 20614 30 8 7 chr10 27830194 27833458 -112483307 + L1PA3 LINE L1 2886 6152 -3 195 230 69 69 chr10 27833812 27833899 -112482866 + MIR3 SINE MIR 108 194 -14 196 318 152 0 chr10 27834355 27834421 -112482344 - L3 LINE CR1 -3 1574 1499 2331 101 10 0 chr10 27834519 27834826 -112481939 - AluSg SINE Alu 0 310 1 292 270 0 45 chr10 27834860 27834949 -112481816 - MIR3 SINE MIR -40 168 84 544 158 0 21 chr10 27835082 27835177 -112481588 - AluSg/x SINE Alu -19 290 198 1698 177 0 32 chr10 27835211 27835522 -112481243 + AluJb SINE Alu 1 301 -11 9084 175 21 17 chr10 27835564 27838349 -112478416 + L1PB3 LINE L1 3369 6154 0 277 194 0 28 chr10 27838547 27838619 -112478146 - MLT2D LTR ERVL -295 119 50 271 98 0 0 chr10 27838702 27838743 -112478022 - MLT2D LTR ERVL -373 41 1 264 326 31 0 chr10 27839587 27839685 -112477080 + MIR3 SINE MIR 87 187 -21 25 65 0 0 chr10 27841636 27841682 -112475083 + AT_rich Low_complexity Low_complexity 1 46 0 42 36 0 0 chr10 27842040 27842096 -112474669 + AT_rich Low_complexity Low_complexity 1 56 0 579 242 0 0 chr10 27842727 27842855 -112473910 + MER94 DNA DNA 4 131 -3 883 229 46 29 chr10 27843036 27843276 -112473489 - L1MB8 LINE L1 -1 6177 5934 482 0 0 17 chr10 27843276 27843335 -112473430 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1513 61 0 0 chr10 27843335 27843516 -112473249 - AluY SINE Alu -24 287 107 1293 104 0 0 chr10 27843517 27843680 -112473085 - AluY SINE Alu -148 163 1 1268 183 21 7 chr10 27843680 27843948 -112472817 - L1MB8 LINE L1 -241 5913 5662 209 238 0 0 chr10 27844109 27844151 -112472614 + (TA)n Simple_repeat Simple_repeat 1 42 0 34 24 0 0 chr10 27846112 27846153 -112470612 + AT_rich Low_complexity Low_complexity 1 41 0 1622 215 24 1 chr10 27848387 27848793 -112467972 - L1PA15-16 LINE L1 -3845 3004 2591 360 319 29 91 chr10 27848853 27849094 -112467671 + L2 LINE L2 3031 3256 -16 784 331 128 20 chr10 27849451 27849856 -112466909 - L3 LINE CR1 -12 1565 1117 2159 87 4 0 chr10 27850771 27851048 -112465717 - AluY SINE Alu -17 294 17 1897 172 0 0 chr10 27851412 27851709 -112465056 - AluJb SINE Alu -15 297 1 387 270 116 21 chr10 27851725 27851958 -112464807 - L1ME4a LINE L1 -188 5933 5679 23 33 0 0 chr10 27852005 27852035 -112464730 + AT_rich Low_complexity Low_complexity 1 30 0 619 305 62 13 chr10 27852158 27852384 -112464381 - MIR SINE MIR -12 250 14 1921 237 69 14 chr10 27852690 27853180 -112463585 - LTR40a LTR ERVL 0 519 3 483 298 50 32 chr10 27853315 27853594 -112463171 - L1MEd LINE L1 -4862 1257 974 22 80 0 0 chr10 27854380 27854430 -112462335 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 27854796 27854817 -112461948 + AT_rich Low_complexity Low_complexity 1 21 0 598 202 18 0 chr10 27855723 27855857 -112460908 - FLAM_A SINE Alu 0 140 5 2401 78 0 3 chr10 27856399 27856705 -112460060 + AluSg SINE Alu 1 305 -5 337 355 69 16 chr10 27857045 27857127 -112459638 + L2 LINE L2 2304 2380 -934 2054 107 0 24 chr10 27857127 27857443 -112459322 - AluSg SINE Alu 0 309 1 337 355 69 16 chr10 27857443 27857548 -112459217 + L2 LINE L2 2380 2502 -812 32 26 0 0 chr10 27858886 27858925 -112457840 + AT_rich Low_complexity Low_complexity 1 39 0 301 267 119 0 chr10 27859631 27859732 -112457033 - MIR3 SINE MIR -1 207 95 2284 77 0 20 chr10 27860005 27860303 -112456462 - AluY SINE Alu -19 292 1 409 302 9 93 chr10 27861035 27861250 -112455515 + MIR SINE MIR 32 228 -34 256 296 0 0 chr10 27861306 27861360 -112455405 + L2 LINE L2 3241 3294 -19 8430 171 80 14 chr10 27861569 27861688 -112455077 - L1 LINE L1 -1161 6404 6294 1371 128 123 78 chr10 27861688 27862047 -112454718 - THE1C LTR MaLR 0 375 1 8430 171 80 14 chr10 27862047 27863086 -112453679 - L1 LINE L1 -1271 6294 5325 2032 68 0 68 chr10 27863086 27863401 -112453364 - AluSp SINE Alu 0 319 24 8430 171 80 14 chr10 27863401 27864243 -112452522 - L1 LINE L1 -2240 5325 4269 3198 122 0 4 chr10 27864249 27864739 -112452026 - MER75 DNA T2_type -24 490 3 18256 157 40 6 chr10 27864741 27865399 -112451366 - L1 LINE L1 -3280 4285 3651 216 67 0 0 chr10 27865399 27865429 -112451336 + (TTG)n Simple_repeat Simple_repeat 2 31 0 18256 157 40 6 chr10 27865429 27867214 -112449551 - L1 LINE L1 -3914 3651 1656 333 0 0 0 chr10 27867214 27867251 -112449514 + (TC)n Simple_repeat Simple_repeat 2 38 0 18256 157 40 6 chr10 27867251 27868622 -112448143 - L1 LINE L1 -5909 1656 334 450 0 0 0 chr10 27869431 27869481 -112447284 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 242 114 0 0 chr10 27869518 27869553 -112447212 + MER21A LTR ERV1 34 68 -863 2224 168 133 113 chr10 27869663 27870481 -112446284 + MER21A LTR ERV1 70 904 -27 203 200 50 0 chr10 27870508 27870548 -112446217 + MER91B DNA MER1_type 36 77 -113 2505 58 0 13 chr10 27871556 27871866 -112444899 + AluY SINE Alu 1 306 -5 206 269 19 0 chr10 27872598 27872650 -112444115 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1363 278 75 8 chr10 27872743 27873233 -112443532 - L2 LINE L2 -933 2381 1859 248 268 46 9 chr10 27873234 27873364 -112443401 + L1MD3 LINE L1 7315 7624 -356 722 293 171 10 chr10 27873386 27873731 -112443034 - L2 LINE L2 -1469 1845 1422 2328 104 13 0 chr10 27873731 27874038 -112442727 - AluY SINE Alu 0 311 1 722 293 171 10 chr10 27874038 27874102 -112442663 - L2 LINE L2 -1892 1422 1370 251 193 0 0 chr10 27874139 27874196 -112442569 + L1ME4a LINE L1 6063 6119 -2 364 98 0 7 chr10 27874282 27874346 -112442419 - Alu SINE Alu -259 49 1 186 97 75 21 chr10 27875601 27875694 -112441071 + (TA)n Simple_repeat Simple_repeat 2 99 0 902 265 15 0 chr10 27875787 27875991 -112440774 + MER58A DNA MER1_type 5 211 -13 229 246 16 0 chr10 27877243 27877304 -112439461 + (TA)n Simple_repeat Simple_repeat 2 63 0 544 281 145 42 chr10 27877405 27877608 -112439157 - L2 LINE L2 -4 3309 3128 2152 129 0 3 chr10 27877608 27877917 -112438848 + AluSg SINE Alu 1 308 -2 544 281 145 42 chr10 27877917 27878333 -112438432 - L2 LINE L2 -185 3128 2625 248 263 20 81 chr10 27878532 27878563 -112438202 + LTR33 LTR ERVL 5 36 -485 1861 206 83 15 chr10 27878563 27879034 -112437731 + MLT1D LTR MaLR 3 505 0 248 263 20 81 chr10 27879034 27879101 -112437664 + LTR33 LTR ERVL 36 97 -424 512 266 86 27 chr10 27879110 27879332 -112437433 + LTR33 LTR ERVL 221 455 -66 2185 197 66 2 chr10 27879335 27879792 -112436973 + L1MCa LINE L1 28 513 -5913 3242 186 54 14 chr10 27879830 27880592 -112436173 + L1MCa LINE L1 633 1424 -5002 4255 171 26 4 chr10 27881881 27882683 -112434082 - L1MC1 LINE L1 -5 6328 5509 3080 232 33 2 chr10 27882685 27883559 -112433206 - L1MC1 LINE L1 -1405 4741 3841 225 306 67 15 chr10 27883766 27883900 -112432865 + L2 LINE L2 3165 3305 -8 1872 100 0 16 chr10 27883938 27884040 -112432725 + AluSx SINE Alu 35 137 -168 2210 106 0 13 chr10 27884040 27884383 -112432382 + AluSp SINE Alu 1 313 0 1872 100 0 16 chr10 27884383 27884555 -112432210 + AluSx SINE Alu 137 305 0 2548 70 0 3 chr10 27884981 27885293 -112431472 - AluY SINE Alu 0 311 1 249 376 36 21 chr10 27885444 27885767 -112430998 - L2 LINE L2 -211 3061 2702 221 325 48 16 chr10 27886126 27886252 -112430513 - L2 LINE L2 0 3313 3184 2175 95 7 0 chr10 27886324 27886598 -112430167 + AluSc SINE Alu 22 297 -12 337 131 33 0 chr10 27886671 27886732 -112430033 - L1M4 LINE L1 -898 5248 5186 1009 236 7 7 chr10 27887345 27887633 -112429132 - L1M4 LINE L1 -974 5172 4885 3129 274 133 37 chr10 27887980 27889367 -112427398 - L2 LINE L2 -2 3311 2058 2240 107 3 7 chr10 27889367 27889677 -112427088 + AluSx SINE Alu 2 310 -2 3129 274 133 37 chr10 27889677 27889899 -112426866 - L2 LINE L2 -1255 2058 1859 2596 26 3 19 chr10 27889899 27890208 -112426557 + AluY SINE Alu 1 304 -7 3129 274 133 37 chr10 27890208 27890250 -112426515 - L2 LINE L2 -1454 1859 1507 362 117 0 78 chr10 27893721 27893779 -112422986 + L1ME1 LINE L1 5775 5827 -337 1501 158 21 4 chr10 27893779 27894013 -112422752 + AluJo SINE Alu 65 302 -10 362 117 0 78 chr10 27894013 27894031 -112422734 + L1ME1 LINE L1 5827 5845 -319 1878 90 7 80 chr10 27894059 27894360 -112422405 + AluY SINE Alu 1 279 -32 276 98 0 0 chr10 27894360 27894427 -112422338 + Alu SINE Alu 242 308 0 23 0 0 0 chr10 27894427 27894450 -112422315 + AT_rich Low_complexity Low_complexity 1 23 0 1187 209 36 10 chr10 27894450 27894756 -112422009 + L1ME1 LINE L1 5845 6158 -8 353 325 36 16 chr10 27895075 27895327 -112421438 - L1M4 LINE L1 -1146 5000 4744 244 87 101 0 chr10 27895345 27895414 -112421351 + (TA)n Simple_repeat Simple_repeat 1 76 0 2406 224 15 5 chr10 27895421 27896033 -112420732 - L1 LINE L1 -904 6263 5646 1762 136 3 10 chr10 27896047 27896341 -112420424 - L1PB1 LINE L1 0 6867 6576 425 109 0 70 chr10 27896343 27896610 -112420155 + (TA)n Simple_repeat Simple_repeat 1 248 0 13840 197 60 17 chr10 27896630 27902858 -112413907 - L1PB1 LINE L1 -360 6507 6 1829 154 51 2 chr10 27902883 27903293 -112413472 - L1 LINE L1 -1510 5657 5228 1082 135 81 9 chr10 27903295 27903517 -112413248 - Tigger7 DNA MER2_type 0 2491 2254 246 62 0 0 chr10 27903517 27903549 -112413216 + (TC)n Simple_repeat Simple_repeat 1 32 0 3454 162 71 3 chr10 27903551 27904198 -112412567 - Tigger7 DNA MER2_type -1755 732 42 1316 209 0 3 chr10 27904208 27904500 -112412265 - L1 LINE L1 -1941 5226 4936 3974 209 23 14 chr10 27904917 27905258 -112411507 - L1 LINE L1 -2201 4966 4630 1818 180 0 16 chr10 27905258 27905575 -112411190 - AluJo SINE Alu 0 312 1 3974 209 23 14 chr10 27905575 27906345 -112410420 - L1 LINE L1 -2537 4630 3845 1326 213 27 45 chr10 27906465 27906822 -112409943 - L1 LINE L1 -6769 399 48 1777 156 46 22 chr10 27906822 27907188 -112409577 - THE1C LTR MaLR 0 375 1 1326 213 27 45 chr10 27907188 27907234 -112409531 - L1 LINE L1 -7120 48 3 26 50 0 0 chr10 27908923 27908963 -112407802 + AT_rich Low_complexity Low_complexity 1 40 0 190 222 0 0 chr10 27909250 27909295 -112407470 - L2 LINE L2 -6 3307 3263 2220 82 10 0 chr10 27910088 27910379 -112406386 + AluY SINE Alu 1 294 -17 470 330 108 0 chr10 27910477 27910662 -112406103 + MIR SINE MIR 56 260 -2 220 205 0 0 chr10 27910702 27910741 -112406024 + L2 LINE L2 3216 3254 -18 724 287 118 11 chr10 27911529 27911938 -112404827 - LTR33 LTR ERVL -56 467 21 541 286 81 24 chr10 27912391 27912601 -112404164 - MIR SINE MIR -13 249 28 290 200 0 0 chr10 27912624 27912674 -112404091 - L2 LINE L2 0 3313 3264 218 198 55 66 chr10 27912749 27912840 -112403925 - L2 LINE L2 -1891 1423 1334 2451 65 3 0 chr10 27912950 27913243 -112403522 + AluY SINE Alu 1 294 -17 191 86 35 52 chr10 27914435 27914493 -112402272 + G-rich Low_complexity Low_complexity 4 60 0 27 29 0 0 chr10 27914650 27914684 -112402081 + AT_rich Low_complexity Low_complexity 1 34 0 229 274 177 52 chr10 27915179 27915580 -112401185 + L2 LINE L2 1980 2430 -884 2535 62 0 0 chr10 27916084 27916390 -112400375 - AluY SINE Alu -4 307 2 200 247 286 0 chr10 27917411 27917488 -112399277 - MIR3 SINE MIR 0 208 110 395 333 118 0 chr10 27917488 27917692 -112399073 + MIR SINE MIR 1 228 -34 * 570 218 109 12 chr10 27917671 27917836 -112398929 + L2 LINE L2 3127 3307 -6 233 308 192 0 chr10 27918412 27918532 -112398233 - MIR SINE MIR -10 252 110 228 281 12 0 chr10 27918569 27918651 -112398114 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 1415 169 72 63 chr10 27918674 27919036 -112397729 - L1MB8 LINE L1 -1 6177 5813 39894 72 10 7 chr10 27919058 27925181 -112391584 - L1PA5 LINE L1 -3 6151 11 3079 191 32 17 chr10 27925167 27926381 -112390384 - L1MB8 LINE L1 -323 5855 4622 * 270 0 0 0 chr10 27926536 27926566 -112390199 + (CA)n Simple_repeat Simple_repeat 2 31 0 1026 316 55 25 chr10 27926630 27927267 -112389498 - L1MC4a LINE L1 -1898 5910 5255 23 68 0 0 chr10 27927486 27927530 -112389235 + AT_rich Low_complexity Low_complexity 1 44 0 403 300 50 27 chr10 27927618 27927918 -112388847 - L1MC4a LINE L1 -1314 4832 4526 22 0 0 0 chr10 27928023 27928045 -112388720 + AT_rich Low_complexity Low_complexity 1 22 0 583 282 95 25 chr10 27928090 27928615 -112388150 - L1MC4a LINE L1 -1904 4242 3681 200 253 67 27 chr10 27928743 27928818 -112387947 + MER5A DNA MER1_type 87 164 -25 2241 103 0 3 chr10 27928870 27929171 -112387594 + AluY SINE Alu 1 300 -11 399 278 99 81 chr10 27929259 27929705 -112387060 - L1MC4a LINE L1 -2703 3443 2990 1227 221 72 0 chr10 27930948 27931197 -112385568 + Tigger7 DNA MER2_type 1 267 -2220 550 168 0 40 chr10 27931196 27931297 -112385468 + Tigger7 DNA MER2_type 2490 2586 -1 * 1482 201 24 20 chr10 27932531 27932829 -112383936 - AluJo SINE Alu -11 301 3 227 175 0 0 chr10 27934262 27934302 -112382463 + CT-rich Low_complexity Low_complexity 1 40 0 2083 123 10 3 chr10 27934852 27935161 -112381604 + AluSx SINE Alu 1 311 -1 339 320 64 6 chr10 27935378 27935534 -112381231 + MIR3 SINE MIR 35 199 -9 405 348 85 0 chr10 27936379 27936497 -112380268 - L2 LINE L2 -9 3263 3136 339 403 28 17 chr10 27936649 27936937 -112379828 - L2 LINE L2 -400 2914 2624 2232 191 19 17 chr10 27937767 27938232 -112378533 - MLT1C LTR MaLR -1 466 1 1047 163 36 50 chr10 27938383 27938604 -112378161 - MER20 DNA MER1_type 0 219 2 6344 64 5 23 chr10 27938990 27939859 -112376906 - L1PA13 LINE L1 -11 6152 5300 671 275 122 59 chr10 27940019 27940294 -112376471 + L2 LINE L2 2489 2745 -568 2237 100 0 7 chr10 27940294 27940594 -112376171 - AluSx SINE Alu -14 298 1 671 275 122 59 chr10 27940594 27941091 -112375674 + L2 LINE L2 2745 3294 -19 1531 173 20 39 chr10 27941536 27941842 -112374923 + AluJo SINE Alu 1 300 -12 204 278 11 100 chr10 27942098 27942188 -112374577 - L2 LINE L2 -7 3306 3225 2164 92 0 4 chr10 27943144 27943417 -112373348 + AluSx SINE Alu 15 286 -26 345 372 28 0 chr10 27944148 27944293 -112372472 + L2 LINE L2 2531 2679 -635 225 154 0 0 chr10 27944362 27944401 -112372364 + CT-rich Low_complexity Low_complexity 3 41 0 244 268 141 0 chr10 27944489 27944560 -112372205 + L2 LINE L2 3191 3271 -1 441 330 125 47 chr10 27944567 27945122 -112371643 + L1M4 LINE L1 4778 5403 -743 2332 93 0 0 chr10 27945307 27945618 -112371147 + AluY SINE Alu 1 311 0 1465 158 0 20 chr10 27945627 27945873 -112370892 + AluJo SINE Alu 64 304 -8 346 300 0 0 chr10 27948650 27948740 -112368025 + MIR3 SINE MIR 65 154 -54 208 291 0 0 chr10 27948925 27948980 -112367785 + MIR3 SINE MIR 151 205 -3 42 71 0 0 chr10 27949418 27949502 -112367263 + AT_rich Low_complexity Low_complexity 1 84 0 1794 157 0 20 chr10 27951773 27952073 -112364692 - AluJb SINE Alu -18 294 1 949 213 0 0 chr10 27955259 27955428 -112361337 - FRAM SINE Alu -15 161 1 593 188 13 34 chr10 27956180 27956329 -112360436 + L1MC4 LINE L1 7897 8042 0 224 293 85 37 chr10 27956766 27956848 -112359917 - MIR SINE MIR -104 104 19 32 43 0 0 chr10 27957007 27957053 -112359712 + AT_rich Low_complexity Low_complexity 1 46 0 2117 104 33 3 chr10 27957357 27957656 -112359109 + AluSq SINE Alu 3 310 -3 2026 132 7 7 chr10 27958398 27958702 -112358063 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 27958757 27958778 -112357987 + AT_rich Low_complexity Low_complexity 1 21 0 3347 120 92 21 chr10 27958947 27960003 -112356762 + MER11A LTR ERVK 1 1236 0 23 39 0 39 chr10 27960886 27960910 -112355855 + AT_rich Low_complexity Low_complexity 1 24 -26 1900 102 8 16 chr10 27960910 27961165 -112355600 - AluSp SINE Alu -24 289 37 23 39 0 39 chr10 27961165 27961192 -112355573 + AT_rich Low_complexity Low_complexity 24 50 0 1611 137 67 39 chr10 27961272 27961556 -112355209 + AluSx SINE Alu 1 292 -20 198 172 276 0 chr10 27961727 27961785 -112354980 - L2 LINE L2 -251 3062 2989 2420 97 0 3 chr10 27962064 27962374 -112354391 + AluSx SINE Alu 1 309 -3 212 0 36 0 chr10 27962812 27962840 -112353925 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2113 105 0 0 chr10 27962842 27963119 -112353646 - AluY SINE Alu -29 282 6 343 264 76 36 chr10 27964468 27964632 -112352133 - MIR SINE MIR -61 147 4 2340 87 0 0 chr10 27964946 27965235 -112351530 + AluSx SINE Alu 1 289 -23 199 245 20 0 chr10 27965745 27965794 -112350971 - L3b LINE CR1 -5 1578 1529 1005 161 21 32 chr10 27966645 27966791 -112349974 + MER5A DNA MER1_type 1 146 -43 2371 88 0 10 chr10 27966791 27967096 -112349669 + AluSq SINE Alu 1 302 -11 1005 161 21 32 chr10 27967096 27967135 -112349630 + MER5A DNA MER1_type 146 184 -5 1314 177 56 76 chr10 27968265 27968661 -112348104 - MLT1B LTR MaLR -2 388 1 872 133 0 0 chr10 27968728 27968848 -112347917 + FLAM_C SINE Alu 1 120 -13 245 250 0 0 chr10 27969245 27969309 -112347456 + (ATG)n Simple_repeat Simple_repeat 2 65 0 490 231 21 7 chr10 27970124 27970135 -112346630 - L1MA10 LINE L1 -2 6332 6322 339 284 47 18 chr10 27970135 27970304 -112346461 - L1ME1 LINE L1 -4 6162 5989 2852 203 43 75 chr10 27970312 27971302 -112345463 - L1MDa LINE L1 -1222 5318 4362 2286 123 0 0 chr10 27971302 27971611 -112345154 - AluSx SINE Alu -3 309 1 2852 203 43 75 chr10 27971611 27971677 -112345088 - L1MDa LINE L1 -2178 4362 4295 1753 139 232 29 chr10 27971700 27972105 -112344660 - L1MA8 LINE L1 -2 6289 5767 252 0 0 0 chr10 27972105 27972133 -112344632 + (TG)n Simple_repeat Simple_repeat 2 29 0 1753 139 232 29 chr10 27972133 27972215 -112344550 - L1MA8 LINE L1 -524 5767 5703 3779 237 113 12 chr10 27972247 27973810 -112342955 - L1MDa LINE L1 -2327 4213 2475 803 229 33 17 chr10 27973821 27974061 -112342704 - L1MDa LINE L1 -6117 604 361 433 257 164 33 chr10 27974323 27974506 -112342259 - MIR SINE MIR 0 262 56 419 286 106 25 chr10 27975214 27975413 -112341352 - MIR SINE MIR -28 234 20 2178 123 7 3 chr10 27976245 27976555 -112340210 - AluSx SINE Alu -1 311 1 1235 115 5 0 chr10 27978765 27978956 -112337809 - L1PA13 LINE L1 -3 6160 5969 253 290 111 44 chr10 27979796 27979896 -112336869 + MIR SINE MIR 3 95 -167 1285 122 0 80 chr10 27979896 27980134 -112336631 + MER20 DNA MER1_type 1 219 0 253 290 111 44 chr10 27980134 27980218 -112336547 + MIR SINE MIR 95 195 -67 2372 87 0 10 chr10 27980320 27980630 -112336135 - AluY SINE Alu -4 307 1 22 0 0 0 chr10 27980735 27980757 -112336008 + AT_rich Low_complexity Low_complexity 1 22 0 2136 79 61 0 chr10 27981085 27981365 -112335400 - AluY SINE Alu -14 297 1 2413 61 0 61 chr10 27981424 27981754 -112335011 - AluY SINE Alu -1 310 1 1527 171 19 26 chr10 27982481 27982750 -112334015 + AluJo SINE Alu 46 312 0 602 265 14 62 chr10 27983580 27983791 -112332974 + MIR SINE MIR 3 203 -59 25 0 0 0 chr10 27983833 27983858 -112332907 + AT_rich Low_complexity Low_complexity 1 25 0 183 263 0 35 chr10 27983974 27984031 -112332734 - L2 LINE L2 -2 3270 3216 298 232 37 49 chr10 27984195 27984277 -112332488 + L2 LINE L2 3232 3312 -1 251 340 172 36 chr10 27985384 27986954 -112329811 - L2 LINE L2 -557 2757 975 196 327 139 0 chr10 27987191 27987292 -112329473 - MIR3 SINE MIR -36 172 58 760 218 42 0 chr10 27988458 27988623 -112328142 + AluJo SINE Alu 120 291 -21 247 211 211 0 chr10 27990261 27990337 -112326428 + L2 LINE L2 3160 3251 -21 493 265 15 0 chr10 27991577 27991709 -112325056 + MER112 DNA MER1_type 123 256 -4 668 216 125 26 chr10 27991862 27992126 -112324639 + MER46C DNA MER2_type 10 299 -39 234 358 11 11 chr10 27997401 27997496 -112319269 + MIR3 SINE MIR 78 172 -36 2527 44 0 0 chr10 27998090 27998386 -112318379 + AluY SINE Alu 1 296 -15 1827 116 0 4 chr10 28000408 28000659 -112316106 + AluSx SINE Alu 62 311 -1 1966 86 52 0 chr10 28000868 28001164 -112315601 - AluY SINE Alu 0 310 1 2301 109 0 13 chr10 28001167 28001480 -112315285 - AluSq SINE Alu -4 309 1 1024 131 171 0 chr10 28001480 28001679 -112315086 + MER6 DNA MER2_type 633 865 0 2219 94 0 3 chr10 28001924 28002212 -112314553 - AluSx SINE Alu -25 287 1 611 312 52 52 chr10 28002267 28002674 -112314091 + L1ME LINE L1 3814 4220 -1926 373 325 173 28 chr10 28002763 28003225 -112313540 + L1ME LINE L1 4370 4898 -1248 461 305 106 39 chr10 28003426 28003960 -112312805 + L1ME LINE L1 5122 5691 -430 275 205 48 0 chr10 28003978 28004061 -112312704 + L1ME LINE L1 5751 5837 -284 22 0 0 0 chr10 28004726 28004748 -112312017 + AT_rich Low_complexity Low_complexity 1 22 0 2561 55 3 0 chr10 28005320 28005628 -112311137 + AluY SINE Alu 1 309 -2 698 168 25 0 chr10 28006020 28006139 -112310626 + FLAM_A SINE Alu 4 125 -8 2355 116 0 0 chr10 28007407 28007717 -112309048 - AluSx SINE Alu -2 310 1 508 294 105 33 chr10 28007946 28008341 -112308424 - L1MC4a LINE L1 -302 5819 5459 2458 80 0 0 chr10 28008341 28008643 -112308122 - AluY SINE Alu -9 302 1 508 294 105 33 chr10 28008643 28008853 -112307912 - L1MC4a LINE L1 -662 5459 5265 339 283 137 53 chr10 28008857 28009179 -112307586 - L1MC4a LINE L1 -886 5260 4912 1238 140 72 0 chr10 28009372 28009565 -112307200 - MLT1B LTR MaLR 0 390 184 7822 30 7 1 chr10 28009568 28011145 -112305620 - L1PA4 LINE L1 0 6155 4574 1067 24 0 0 chr10 28011145 28011268 -112305497 + L1PA4 LINE L1 4464 4586 -1560 1316 116 26 0 chr10 28011268 28011458 -112305307 - MLT1B LTR MaLR -195 195 1 2189 123 10 0 chr10 28011861 28012170 -112304595 + AluSx SINE Alu 1 312 0 194 352 64 59 chr10 28012202 28012438 -112304327 - L2 LINE L2 -668 2646 2410 238 330 66 19 chr10 28012657 28012763 -112304002 - L2 LINE L2 -24 3289 3179 319 115 0 0 chr10 28012860 28012912 -112303853 + MADE1 DNA Mariner 29 80 0 22 35 0 0 chr10 28013880 28013909 -112302856 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr10 28014698 28014724 -112302041 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 2270 117 3 7 chr10 28014724 28015032 -112301733 - AluSq SINE Alu -6 307 1 230 347 129 35 chr10 28016018 28016554 -112300211 + L2 LINE L2 2384 2969 -345 262 254 28 0 chr10 28016936 28017007 -112299758 + (CATA)n Simple_repeat Simple_repeat 3 75 0 313 185 204 9 chr10 28017021 28017129 -112299636 - L1MB8 LINE L1 -7 6171 6043 201 260 0 0 chr10 28017408 28017458 -112299307 + CT-rich Low_complexity Low_complexity 2 51 0 21 0 0 0 chr10 28021416 28021437 -112295328 + GC_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr10 28022076 28022113 -112294652 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr10 28022843 28022872 -112293893 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 28027211 28027253 -112289512 + (TG)n Simple_repeat Simple_repeat 2 43 0 2031 117 0 0 chr10 28030516 28030782 -112285983 - AluSx SINE Alu -11 301 36 849 198 75 16 chr10 28031088 28031275 -112285490 + MER20 DNA MER1_type 7 204 -15 1997 129 0 72 chr10 28032048 28032411 -112284354 + MER1B DNA MER1_type 1 337 0 2321 99 0 13 chr10 28032432 28032735 -112284030 + AluSx SINE Alu 1 299 -13 1083 190 57 14 chr10 28033501 28033712 -112283053 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 28033765 28033806 -112282959 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 1596 178 7 22 chr10 28033950 28034249 -112282516 - AluJo SINE Alu 0 305 11 2089 118 3 10 chr10 28034332 28034629 -112282136 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 28034870 28034920 -112281845 + (TG)n Simple_repeat Simple_repeat 2 51 0 1726 185 150 70 chr10 28035134 28035594 -112281171 - MLT1D LTR MaLR -4 501 5 2039 100 0 85 chr10 28035994 28036325 -112280440 - AluSx SINE Alu -7 305 3 300 264 81 47 chr10 28036556 28036704 -112280061 - MIR SINE MIR -27 235 83 2434 80 6 10 chr10 28037566 28037879 -112278886 + AluSq SINE Alu 1 312 -1 338 286 10 0 chr10 28037881 28037979 -112278786 - MIR SINE MIR -59 149 51 618 319 5 14 chr10 28038080 28038290 -112278475 + MIR SINE MIR 23 230 -32 2309 101 0 3 chr10 28038402 28038698 -112278067 - AluSx SINE Alu -17 295 1 327 224 40 0 chr10 28039130 28039206 -112277559 - L3 LINE CR1 -3 1574 1496 944 168 7 0 chr10 28039639 28039794 -112276971 - FRAM SINE Alu -13 163 8 2412 105 0 0 chr10 28039812 28040125 -112276640 - AluSq SINE Alu 0 313 1 257 295 41 16 chr10 28040898 28041020 -112275745 + MIR SINE MIR 126 250 -12 2026 114 22 0 chr10 28041250 28041523 -112275242 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 28041523 28041573 -112275192 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 149 0 10 chr10 28042701 28042788 -112273977 - L1MB8 LINE L1 -220 5958 5876 233 200 0 0 chr10 28043487 28043532 -112273233 + L2 LINE L2 3267 3311 -2 1055 168 25 0 chr10 28044364 28044561 -112272204 - L1MA4 LINE L1 0 6300 6099 2075 176 124 0 chr10 28044600 28045010 -112271755 - LOR1b LTR ERV1 0 461 1 2190 104 3 7 chr10 28045143 28045431 -112271334 - AluSq SINE Alu -26 287 1 198 286 31 61 chr10 28045452 28045550 -112271215 + L2 LINE L2 3158 3252 -61 1686 173 0 53 chr10 28046836 28047159 -112269606 + AluJb SINE Alu 1 306 -6 29 70 0 0 chr10 28048643 28048700 -112268065 + AT_rich Low_complexity Low_complexity 1 57 0 2523 39 0 32 chr10 28048964 28049272 -112267493 + AluY SINE Alu 1 298 -13 330 311 0 30 chr10 28050839 28050974 -112265791 - MER94 DNA DNA 0 134 4 477 314 78 12 chr10 28051384 28051629 -112265136 + MIR SINE MIR 1 261 -1 418 258 107 31 chr10 28051734 28051893 -112264872 - MIR3 SINE MIR -34 174 4 554 259 161 10 chr10 28052068 28052273 -112264492 - MIR SINE MIR -15 247 12 5462 130 26 70 chr10 28052692 28053170 -112263595 - L1MA8 LINE L1 -3 6288 5791 2582 67 0 10 chr10 28053170 28053484 -112263281 - AluY SINE Alu 0 311 1 5462 130 26 70 chr10 28053484 28053631 -112263134 - L1MA8 LINE L1 -500 5791 5639 2226 112 7 0 chr10 28053631 28053926 -112262839 - AluSx SINE Alu -15 297 1 5462 130 26 70 chr10 28053926 28053987 -112262778 - L1MA8 LINE L1 -652 5639 5577 2262 99 0 0 chr10 28053987 28054314 -112262451 - AluSx SINE Alu 0 327 1 5462 130 26 70 chr10 28054314 28055642 -112261123 - L1MA8 LINE L1 -714 5577 4342 222 307 223 18 chr10 28055978 28056144 -112260621 + MIR SINE MIR 47 246 -16 2592 255 130 54 chr10 28056395 28057378 -112259387 + L2 LINE L2 1036 1943 -1370 1661 160 0 32 chr10 28057378 28057660 -112259105 + AluJb SINE Alu 1 273 -39 2592 255 130 54 chr10 28057660 28058539 -112258226 + L2 LINE L2 1943 3146 -167 210 71 0 0 chr10 28058539 28058567 -112258198 + (CA)n Simple_repeat Simple_repeat 2 29 0 2592 255 130 54 chr10 28058567 28058749 -112258016 + L2 LINE L2 3146 3313 0 206 220 17 85 chr10 28060815 28060874 -112255891 - MIR3 SINE MIR -23 185 131 21 0 0 0 chr10 28065456 28065477 -112251288 + GC_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 28066116 28066163 -112250602 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr10 28066893 28066922 -112249843 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 28071261 28071303 -112245462 + (TG)n Simple_repeat Simple_repeat 2 43 0 1919 117 0 0 chr10 28074566 28074832 -112241933 - AluSx SINE Alu -11 301 36 858 198 75 16 chr10 28075138 28075325 -112241440 + MER20 DNA MER1_type 7 204 -15 2019 129 0 72 chr10 28076098 28076461 -112240304 + MER1B DNA MER1_type 1 337 0 2195 99 0 13 chr10 28076482 28076785 -112239980 + AluSx SINE Alu 1 299 -13 1008 190 57 14 chr10 28077551 28077762 -112239003 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 28077815 28077856 -112238909 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 216 0 0 0 chr10 28078000 28078024 -112238741 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1485 178 0 22 chr10 28078030 28078299 -112238466 - AluJo SINE Alu -39 273 11 1964 118 3 10 chr10 28078382 28078679 -112238086 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 28078920 28078970 -112237795 + (TG)n Simple_repeat Simple_repeat 2 51 0 1734 185 150 70 chr10 28079184 28079644 -112237121 - MLT1D LTR MaLR -4 501 5 1913 100 0 85 chr10 28080044 28080375 -112236390 - AluSx SINE Alu -7 305 3 364 264 81 47 chr10 28080606 28080754 -112236011 - MIR SINE MIR -27 235 83 2306 80 6 10 chr10 28081616 28081929 -112234836 + AluSq SINE Alu 1 312 -1 378 279 23 45 chr10 28081931 28082063 -112234702 - MIR SINE MIR -59 149 20 707 319 5 14 chr10 28082130 28082340 -112234425 + MIR SINE MIR 23 230 -32 2179 101 0 3 chr10 28082452 28082748 -112234017 - AluSx SINE Alu -17 295 1 356 224 40 0 chr10 28083180 28083256 -112233509 - L3 LINE CR1 -3 1574 1496 886 168 7 0 chr10 28083689 28083844 -112232921 - FRAM SINE Alu -13 163 8 2291 105 0 0 chr10 28083862 28084175 -112232590 - AluSq SINE Alu 0 313 1 213 312 11 11 chr10 28084661 28084754 -112232011 - L2 LINE L2 -39 3274 3182 314 295 41 16 chr10 28084948 28085070 -112231695 + MIR SINE MIR 126 250 -12 1907 114 22 0 chr10 28085300 28085573 -112231192 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 28085573 28085623 -112231142 + (CA)n Simple_repeat Simple_repeat 1 50 0 200 238 0 79 chr10 28087148 28087211 -112229554 - L2 LINE L2 -87 3226 3169 641 354 23 4 chr10 28087237 28087497 -112229268 - L2 LINE L2 -223 3090 2826 31 26 0 0 chr10 28087926 28087964 -112228801 + AT_rich Low_complexity Low_complexity 1 38 0 1673 147 0 0 chr10 28088062 28088321 -112228444 + AluSx SINE Alu 39 297 -15 2254 62 0 36 chr10 28088328 28088633 -112228132 + AluY SINE Alu 5 298 -13 305 309 98 0 chr10 28088826 28088949 -112227816 - L3 LINE CR1 -140 1437 1303 2259 52 0 21 chr10 28089544 28089860 -112226905 - AluY SINE Alu 0 310 1 310 293 7 71 chr10 28089914 28090054 -112226711 - L3 LINE CR1 -404 1173 1043 4695 144 20 45 chr10 28091588 28092444 -112224321 + L1MB3 LINE L1 5287 6163 -20 2312 102 0 3 chr10 28092444 28092758 -112224007 + AluSq SINE Alu 1 313 0 1537 39 10 34 chr10 28092761 28092967 -112223798 + L1PA10 LINE L1 5968 6168 0 4695 144 20 45 chr10 28092967 28093017 -112223748 + L1MB3 LINE L1 6165 6174 -9 2166 87 7 20 chr10 28093017 28093316 -112223449 - AluSq SINE Alu -18 295 1 195 321 56 51 chr10 28094371 28094543 -112222222 - L2 LINE L2 -162 3110 2935 3901 77 71 6 chr10 28094543 28095063 -112221702 - MER41A LTR ERV1 0 554 1 195 321 56 51 chr10 28095063 28095086 -112221679 - L2 LINE L2 -337 2935 2914 2319 99 0 0 chr10 28095188 28095500 -112221265 + AluSx SINE Alu 1 312 0 4341 149 65 11 chr10 28095538 28096281 -112220484 - LTR39 LTR ERV1 0 783 1 1822 96 4 0 chr10 28096658 28096909 -112219856 - AluSx SINE Alu -32 280 29 1342 184 79 18 chr10 28097604 28097881 -112218884 - AluJo SINE Alu -7 295 2 2106 88 6 64 chr10 28098443 28098773 -112217992 - AluY SINE Alu 0 311 1 693 278 110 0 chr10 28098917 28099090 -112217675 + MIR SINE MIR 29 220 -42 295 260 58 10 chr10 28099236 28099340 -112217425 - L1ME LINE L1 -492 5629 5521 2192 105 0 26 chr10 28099913 28100226 -112216539 - AluSx SINE Alu -7 305 1 2063 111 3 10 chr10 28100235 28100533 -112216232 - AluSp SINE Alu -17 296 1 24 32 0 0 chr10 28100679 28100710 -112216055 + AT_rich Low_complexity Low_complexity 1 31 0 1819 96 15 165 chr10 28101446 28101618 -112215147 - MER1B DNA MER1_type -2377 335 253 1772 109 4 0 chr10 28101618 28101875 -112214890 - AluSx SINE Alu -17 295 38 1819 96 15 165 chr10 28101875 28102096 -112214669 - MER1B DNA MER1_type -2459 253 1 1052 287 208 21 chr10 28102176 28103227 -112213538 - L2 LINE L2 -502 2812 1565 411 83 0 0 chr10 28103236 28103296 -112213469 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 200 291 0 0 chr10 28103552 28103607 -112213158 - L3b LINE CR1 0 1583 1529 3405 188 52 87 chr10 28103619 28104644 -112212121 - L1MC4 LINE L1 -1 8041 7053 2057 119 3 0 chr10 28104671 28104966 -112211799 + AluSx SINE Alu 1 296 -16 312 204 0 91 chr10 28105648 28105736 -112211029 - MIR SINE MIR 0 262 183 194 306 20 0 chr10 28105848 28105897 -112210868 - MIR SINE MIR -165 97 48 4373 165 39 42 chr10 28105936 28106388 -112210377 - L1MB3 LINE L1 -2 6181 5729 2172 115 0 13 chr10 28106388 28106693 -112210072 - AluSx SINE Alu -11 301 1 4373 165 39 42 chr10 28106693 28107457 -112209308 - L1MB3 LINE L1 -454 5729 4976 428 292 99 60 chr10 28107639 28107923 -112208842 - L1ME4a LINE L1 -178 5943 5632 2107 101 7 0 chr10 28107923 28108219 -112208546 + AluSx SINE Alu 1 298 -14 428 292 99 60 chr10 28108219 28108410 -112208355 - L1ME4a LINE L1 -489 5632 5450 917 83 8 30 chr10 28108471 28108604 -112208161 - L1MA1 LINE L1 -1 6301 6172 411 292 152 25 chr10 28108669 28108946 -112207819 - L1ME4a LINE L1 -893 5253 4942 872 230 9 14 chr10 28108975 28109188 -112207577 - L1MB3 LINE L1 -2500 3646 3435 229 352 55 0 chr10 28109192 28109320 -112207445 - L1ME4a LINE L1 -2061 4085 3951 266 250 0 16 chr10 28109323 28109387 -112207378 + CT-rich Low_complexity Low_complexity 2 64 0 288 291 124 37 chr10 28109388 28110369 -112206396 - L1ME4a LINE L1 -2201 3945 2879 244 323 75 11 chr10 28111527 28111620 -112205145 + MIR SINE MIR 9 107 -155 317 288 138 25 chr10 28111680 28111840 -112204925 - MIR SINE MIR -10 252 75 2304 67 13 10 chr10 28111888 28112186 -112204579 - AluY SINE Alu -12 299 1 2300 101 0 3 chr10 28112781 28113078 -112203687 - AluSc SINE Alu -13 296 1 223 311 0 0 chr10 28113617 28113691 -112203074 + MER5A DNA MER1_type 7 80 -109 465 250 66 40 chr10 28113693 28113845 -112202920 + L2 LINE L2 3158 3313 0 319 269 83 9 chr10 28113843 28113951 -112202814 + MER5A DNA MER1_type 71 186 -3 * 196 250 0 0 chr10 28114093 28114141 -112202624 - L2 LINE L2 -4 3309 3262 304 198 71 0 chr10 28114500 28114579 -112202186 + MIR3 SINE MIR 74 159 -49 587 254 111 29 chr10 28115270 28115550 -112201215 - MER20B DNA MER1_type 0 783 481 236 180 0 40 chr10 28115591 28115641 -112201124 - MER20B DNA MER1_type -669 114 67 2648 47 0 0 chr10 28115762 28116061 -112200704 + AluY SINE Alu 1 299 -12 208 232 87 14 chr10 28119003 28119072 -112197693 + MER5C DNA MER1_type 2 75 -249 2261 114 0 0 chr10 28119337 28119635 -112197130 - AluSx SINE Alu -14 298 1 2428 99 0 0 chr10 28120157 28120461 -112196304 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr10 28121670 28121691 -112195074 + AT_rich Low_complexity Low_complexity 1 21 0 1490 145 58 58 chr10 28123455 28123765 -112193000 + AluJo SINE Alu 1 310 -2 2252 108 3 19 chr10 28123946 28124262 -112192503 - AluSx SINE Alu -1 311 1 192 370 58 35 chr10 28124452 28124625 -112192140 - L2 LINE L2 -21 3251 3075 21 0 0 0 chr10 28125565 28125586 -112191179 + AT_rich Low_complexity Low_complexity 1 21 0 664 226 198 19 chr10 28125935 28126147 -112190618 - MIR SINE MIR -3 259 10 231 333 42 10 chr10 28126847 28126943 -112189822 - L2 LINE L2 -256 3016 2918 24 0 0 0 chr10 28127211 28127235 -112189530 + AT_rich Low_complexity Low_complexity 1 24 0 1810 151 169 20 chr10 28127802 28128152 -112188613 - MER4A LTR ERV1 0 664 263 614 103 21 10 chr10 28128152 28128249 -112188516 - MER4A LTR ERV1 -566 98 1 950 149 0 0 chr10 28128291 28128439 -112188326 + L1PB4 LINE L1 5996 6143 -13 29 0 0 0 chr10 28128439 28128468 -112188297 + AT_rich Low_complexity Low_complexity 1 29 0 863 271 72 11 chr10 28128738 28129015 -112187750 - HAL1 LINE L1 -1796 711 418 2077 148 0 0 chr10 28129521 28129818 -112186947 - AluSx SINE Alu -15 297 1 645 256 136 55 chr10 28129853 28130346 -112186419 - L1ME4a LINE L1 -1 6120 5588 300 283 192 11 chr10 28130354 28130531 -112186234 - L3 LINE CR1 -872 705 497 802 321 97 82 chr10 28130591 28131720 -112185045 + L3 LINE CR1 429 1574 -3 295 305 40 20 chr10 28131807 28131958 -112184807 + MER103 DNA DNA 11 164 -2 2363 86 7 7 chr10 28132140 28132444 -112184321 - AluY SINE Alu -7 304 1 2941 118 7 16 chr10 28134929 28135378 -112181387 - MER65A LTR ERV1 0 445 1 896 97 0 0 chr10 28137369 28137482 -112179283 - AluSg/x SINE Alu -13 297 185 21 0 0 0 chr10 28137734 28137755 -112179010 + AT_rich Low_complexity Low_complexity 1 21 0 2442 96 0 0 chr10 28140741 28141053 -112175712 - AluSx SINE Alu 0 312 1 262 307 108 12 chr10 28141352 28141518 -112175247 - MIR SINE MIR 0 262 81 406 322 41 6 chr10 28142017 28142188 -112174577 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 28143074 28143124 -112173641 + (CA)n Simple_repeat Simple_repeat 1 50 0 997 186 35 30 chr10 28143157 28143356 -112173409 - MER3 DNA MER1_type 0 209 10 1738 172 82 18 chr10 28143540 28143883 -112172882 - MLT1A1 LTR MaLR 0 365 1 2131 114 0 39 chr10 28144496 28144802 -112171963 - AluSx SINE Alu -18 294 1 3474 150 105 0 chr10 28145251 28145858 -112170907 - LTR51 LTR ERV1 0 671 1 21 82 0 0 chr10 28149011 28149060 -112167705 + AT_rich Low_complexity Low_complexity 1 49 0 545 103 0 11 chr10 28151012 28151099 -112165666 + (GGGA)n Simple_repeat Simple_repeat 4 89 0 401 218 62 38 chr10 28152348 28152517 -112164248 - L1MD3 LINE L1 0 7995 7772 1167 147 0 0 chr10 28152545 28152715 -112164050 - AluSg/x SINE Alu -9 301 132 2265 105 0 7 chr10 28152715 28153021 -112163744 - AluSx SINE Alu -8 304 1 254 195 0 49 chr10 28153047 28153129 -112163636 - L1MC5 LINE L1 -279 7682 7605 494 308 81 9 chr10 28153715 28153839 -112162926 + MIR SINE MIR 17 131 -131 3803 94 59 0 chr10 28153839 28154362 -112162403 + MER41A LTR ERV1 1 554 0 494 308 81 9 chr10 28154362 28154458 -112162307 + MIR SINE MIR 131 253 -9 188 184 20 0 chr10 28154873 28154922 -112161843 + (TA)n Simple_repeat Simple_repeat 1 50 0 3177 102 13 55 chr10 28155375 28156041 -112160724 + LTR8A LTR ERV1 1 727 0 3074 125 53 25 chr10 28156540 28157137 -112159628 - MER4B LTR ERV1 0 779 1 2027 136 13 7 chr10 28158769 28159070 -112157695 + AluJb SINE Alu 1 303 -9 795 217 0 6 chr10 28159215 28159376 -112157389 + MIR SINE MIR 33 192 -70 1463 178 36 77 chr10 28159907 28160186 -112156579 + MLT1A1 LTR MaLR 16 278 -87 1529 199 28 7 chr10 28160186 28160472 -112156293 + AluJo SINE Alu 1 292 -20 1463 178 36 77 chr10 28160472 28160557 -112156208 + MLT1A1 LTR MaLR 278 365 0 510 17 0 0 chr10 28160624 28160683 -112156082 + (CA)n Simple_repeat Simple_repeat 2 60 0 324 0 0 0 chr10 28161345 28161381 -112155384 + (TG)n Simple_repeat Simple_repeat 1 36 0 1742 141 64 7 chr10 28162510 28162793 -112153972 - AluSx SINE Alu -13 299 1 2174 112 0 3 chr10 28163159 28163471 -112153294 + AluSx SINE Alu 1 311 -1 1606 178 24 21 chr10 28163945 28164232 -112152533 - AluJb SINE Alu -22 290 3 2464 76 3 0 chr10 28165178 28165480 -112151285 - AluSp SINE Alu -10 303 1 260 277 146 36 chr10 28165744 28165881 -112150884 - L2 LINE L2 0 3313 3162 1062 149 0 5 chr10 28165896 28166091 -112150674 + L1MA6 LINE L1 6107 6300 0 553 164 17 0 chr10 28166093 28166209 -112150556 + GA-rich Low_complexity Low_complexity 3 120 0 287 262 33 49 chr10 28166753 28166875 -112149890 - L2 LINE L2 -634 2680 2561 269 216 59 39 chr10 28167978 28168131 -112148634 + HAL1 LINE L1 1066 1221 -1286 830 148 49 0 chr10 28168177 28168319 -112148446 + L1PB3 LINE L1 5998 6146 -8 21 57 0 0 chr10 28168319 28168354 -112148411 + AT_rich Low_complexity Low_complexity 1 35 0 547 182 27 9 chr10 28168363 28168473 -112148292 + FLAM_A SINE Alu 11 122 -20 2388 96 0 3 chr10 28168481 28168784 -112147981 + AluSp SINE Alu 1 302 -11 460 348 78 12 chr10 28168884 28169217 -112147548 + L1MEd LINE L1 11 365 -5754 1534 264 90 26 chr10 28169219 28169805 -112146960 - L2 LINE L2 -2595 719 96 3374 95 2 12 chr10 28170090 28170448 -112146317 - L1PB1 LINE L1 -1 6150 5797 450 0 0 0 chr10 28170448 28170498 -112146267 + (TG)n Simple_repeat Simple_repeat 1 50 0 3374 95 2 12 chr10 28170498 28170632 -112146133 - L1PB1 LINE L1 -354 5797 5663 2134 145 3 0 chr10 28171146 28171457 -112145308 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 28172381 28172401 -112144364 + (TA)n Simple_repeat Simple_repeat 2 21 0 339 333 9 47 chr10 28172490 28172591 -112144174 - L1ME LINE L1 -389 5732 5642 2021 147 0 16 chr10 28172591 28172766 -112143999 - AluJb SINE Alu -3 309 140 1911 113 28 14 chr10 28172766 28173057 -112143708 - AluSq SINE Alu -18 295 1 2021 147 0 16 chr10 28173057 28173195 -112143570 - AluJb SINE Alu -172 140 1 339 333 9 47 chr10 28173195 28173306 -112143459 - L1ME LINE L1 -479 5642 5528 304 327 86 41 chr10 28173660 28173880 -112142885 + HAL1 LINE L1 975 1204 -1303 335 174 12 0 chr10 28174017 28174103 -112142662 + (TA)n Simple_repeat Simple_repeat 1 87 0 2438 153 8 0 chr10 28174479 28174879 -112141886 - MER57A LTR ERV1 0 403 1 299 312 85 21 chr10 28175357 28175498 -112141267 - MIR3 SINE MIR -31 177 28 400 263 39 90 chr10 28176335 28176590 -112140175 - L1M4 LINE L1 -3095 3233 2992 5889 92 14 52 chr10 28176616 28177770 -112138995 + L1PA10 LINE L1 5049 6166 -2 221 194 0 32 chr10 28177902 28177964 -112138801 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 461 273 16 16 chr10 28178084 28178205 -112138560 + L2 LINE L2 3190 3310 -3 347 247 72 0 chr10 28178438 28178535 -112138230 - MER91C DNA MER1_type -35 105 2 294 29 0 0 chr10 28178696 28178731 -112138034 + (TC)n Simple_repeat Simple_repeat 1 35 0 4237 80 102 2 chr10 28179691 28180291 -112136474 + PABL_A LTR ERV1 1 660 0 4767 104 10 18 chr10 28180292 28181023 -112135742 + PABL_A-int LTR ERV1 2 726 -4289 541 52 0 0 chr10 28181024 28181101 -112135664 - Alu SINE Alu -3 307 231 1381 43 0 16 chr10 28181101 28181287 -112135478 + PABL_A-int LTR ERV1 717 899 -4116 * 3536 63 2 4 chr10 28181279 28181783 -112134982 + PABL_A-int LTR ERV1 1151 1653 -3362 809 156 271 0 chr10 28181783 28181982 -112134783 - LTR8 LTR ERV1 -438 253 1 1257 46 46 5 chr10 28181982 28182177 -112134588 + PABL_A-int LTR ERV1 1862 2064 -2951 4754 228 28 11 chr10 28182179 28183491 -112133274 - L1M4 LINE L1 -4066 1262 14 625 127 59 34 chr10 28184067 28184185 -112132580 + FLAM_C SINE Alu 13 133 -10 1748 111 88 50 chr10 28184191 28184488 -112132277 - AluSx SINE Alu -4 308 1 349 252 137 8 chr10 28184849 28184980 -112131785 + L2 LINE L2 3158 3305 -8 2714 181 22 67 chr10 28185267 28185908 -112130857 - LTR9 LTR ERV1 0 612 1 5730 120 3 1 chr10 28186092 28187036 -112129729 + L1PA13 LINE L1 5215 6163 0 1334 158 10 86 chr10 28187565 28187829 -112128936 + MSTA LTR MaLR 148 388 -40 1937 150 7 0 chr10 28187829 28188122 -112128643 - AluSx SINE Alu -17 295 1 1334 158 10 86 chr10 28188122 28188161 -112128604 + MSTA LTR MaLR 388 428 0 668 267 29 6 chr10 28189064 28189236 -112127529 + FRAM SINE Alu 1 40 0 678 197 15 28 chr10 28189240 28189558 -112127207 + GA-rich Low_complexity Low_complexity 1 313 0 841 161 0 17 chr10 28189598 28189778 -112126987 + GA-rich Low_complexity Low_complexity 4 180 0 315 164 0 0 chr10 28190833 28190894 -112125871 + (CA)n Simple_repeat Simple_repeat 2 62 0 985 116 46 0 chr10 28191781 28191954 -112124811 + L1MA4 LINE L1 6115 6295 -5 23 0 0 0 chr10 28192052 28192075 -112124690 + AT_rich Low_complexity Low_complexity 1 23 0 224 292 0 0 chr10 28192081 28192129 -112124636 - MIR SINE MIR -4 258 211 2249 86 20 3 chr10 28192437 28192460 -112124305 - AluSc SINE Alu -2 307 286 531 0 0 0 chr10 28192460 28192519 -112124246 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2249 86 20 3 chr10 28192519 28192797 -112123968 - AluSc SINE Alu -23 286 1 415 314 39 76 chr10 28192797 28193281 -112123484 - L1M4 LINE L1 -939 5207 4742 451 309 46 0 chr10 28193318 28193470 -112123295 - MIR SINE MIR -102 160 2 877 70 0 31 chr10 28193476 28193605 -112123160 + AluY SINE Alu 187 311 0 21 36 0 0 chr10 28193676 28193704 -112123061 + AT_rich Low_complexity Low_complexity 1 28 0 1850 141 48 0 chr10 28193783 28194073 -112122692 + AluSx SINE Alu 1 304 -8 593 300 50 27 chr10 28194277 28194717 -112122048 - L1M4 LINE L1 -2027 4119 3670 201 278 19 0 chr10 28195952 28196006 -112120759 - L2 LINE L2 -575 2739 2685 3662 107 73 28 chr10 28196007 28197070 -112119695 + MER11A LTR ERVK 1 1232 -4 233 361 98 15 chr10 28197604 28197809 -112118956 + L2 LINE L2 2643 2864 -450 2181 103 4 0 chr10 28198038 28198348 -112118417 - AluY SINE Alu 0 311 1 2234 112 0 0 chr10 28198350 28198644 -112118121 - AluSg SINE Alu -16 294 1 1112 160 9 19 chr10 28198975 28199096 -112117669 + MER2 DNA MER2_type 1 122 -223 189 0 0 0 chr10 28199096 28199117 -112117648 + (TA)n Simple_repeat Simple_repeat 1 21 0 639 152 64 24 chr10 28199117 28199242 -112117523 - FLAM_C SINE Alu -3 130 1 1112 160 9 19 chr10 28199242 28199331 -112117434 + MER2 DNA MER2_type 120 210 -135 2545 113 60 21 chr10 28200005 28200438 -112116327 + LTR7 LTR ERV1 1 450 0 411 21 0 0 chr10 28201121 28201169 -112115596 + (GA)n Simple_repeat Simple_repeat 1 48 0 1271 202 67 5 chr10 28202815 28203241 -112113524 + MLT1D LTR MaLR 1 491 -14 849 204 58 119 chr10 28203251 28203628 -112113137 - MLT1A1 LTR MaLR -11 354 1 522 164 82 9 chr10 28203637 28203747 -112113018 + MLT1D-int LTR MaLR 2 119 -1252 1049 251 130 14 chr10 28204118 28204540 -112112225 + MER20B DNA MER1_type 124 594 -189 394 123 86 12 chr10 28204538 28204619 -112112146 - LTR52 LTR ERVL -29 392 306 * 4821 132 19 12 chr10 28204620 28205426 -112111339 + L1MC2 LINE L1 5532 6342 -2 392 290 65 12 chr10 28205490 28205767 -112110998 + L1ME LINE L1 5283 5495 -669 499 240 8 8 chr10 28205767 28205888 -112110877 - MLT1E LTR MaLR 0 593 473 1485 229 32 5 chr10 28205900 28206446 -112110319 + Charlie1 DNA MER1_type 1817 2454 -307 206 130 19 37 chr10 28208085 28208139 -112108626 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 552 190 0 17 chr10 28209894 28210010 -112106755 - AluSg/x SINE Alu -2 307 194 2857 118 7 16 chr10 28212569 28213018 -112103747 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 28215009 28215122 -112101643 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 28215374 28215395 -112101370 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 28215745 28215855 -112100910 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 28218381 28218693 -112098072 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 28218992 28219189 -112097576 - MIR SINE MIR 0 262 52 440 328 41 6 chr10 28219657 28219828 -112096937 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 28220714 28220764 -112096001 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 28220797 28220996 -112095769 - MER3 DNA MER1_type 0 209 10 1540 184 87 19 chr10 28221180 28221501 -112095264 - MLT1A1 LTR MaLR 0 365 23 963 280 224 19 chr10 28221508 28222443 -112094322 + L2 LINE L2 1687 2812 -502 1766 96 15 165 chr10 28222523 28222744 -112094021 + MER1B DNA MER1_type 1 139 -2573 1857 109 4 0 chr10 28222744 28223001 -112093764 + AluSx SINE Alu 38 295 -17 1766 96 15 165 chr10 28223001 28223173 -112093592 + MER1B DNA MER1_type 139 335 -4 24 32 0 0 chr10 28223909 28223940 -112092825 + AT_rich Low_complexity Low_complexity 1 31 0 2165 111 3 10 chr10 28224086 28224384 -112092381 + AluSp SINE Alu 1 296 -17 2301 105 0 26 chr10 28224393 28224706 -112092059 + AluSx SINE Alu 1 305 -7 313 260 58 10 chr10 28225279 28225383 -112091382 + L1ME LINE L1 5521 5629 -492 676 278 110 0 chr10 28225529 28225702 -112091063 - MIR SINE MIR -42 220 29 2190 91 6 64 chr10 28225846 28226176 -112090589 + AluY SINE Alu 1 311 0 1296 187 79 18 chr10 28226737 28227015 -112089750 + AluJo SINE Alu 1 295 -17 1908 96 4 0 chr10 28227710 28227961 -112088804 + AluSx SINE Alu 29 280 -32 2241 170 104 18 chr10 28228338 28228791 -112087974 + LTR39 LTR ERV1 1 492 -291 777 172 16 0 chr10 28229543 28229671 -112087094 - FLAM_C SINE Alu -3 130 1 1766 180 0 0 chr10 28230339 28230617 -112086148 + AluSx SINE Alu 3 280 -32 325 151 14 14 chr10 28230619 28230692 -112086073 + GA-rich Low_complexity Low_complexity 3 75 0 6169 33 30 3 chr10 28231170 28231894 -112084871 - L1PA3 LINE L1 0 6155 5412 2684 66 22 19 chr10 28232717 28233079 -112083686 + L1PA11 LINE L1 5686 6048 -126 397 87 0 29 chr10 28233381 28233450 -112083315 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 494 330 110 42 chr10 28233454 28234171 -112082594 - L1 LINE L1 -1098 5048 4283 723 243 119 5 chr10 28234259 28234444 -112082321 + MER58A DNA MER1_type 19 224 0 648 332 55 7 chr10 28234494 28234941 -112081824 - L1 LINE L1 -2013 4133 3666 1666 183 0 30 chr10 28235386 28235687 -112081078 + AluJo SINE Alu 1 292 -20 2019 66 8 0 chr10 28235972 28236216 -112080549 - L1PA8 LINE L1 -15 6157 5912 412 274 65 38 chr10 28236572 28236629 -112080136 - MIR SINE MIR -29 233 179 1726 182 0 26 chr10 28236629 28236937 -112079828 - AluJo SINE Alu -10 302 3 412 274 65 38 chr10 28236937 28237065 -112079700 - MIR SINE MIR -83 179 43 369 217 76 131 chr10 28237606 28237668 -112079097 + LTR41 LTR ERVL 1 65 -708 3727 183 13 37 chr10 28237668 28238433 -112078332 - L1MB8 LINE L1 0 6178 5432 369 217 76 131 chr10 28238433 28238568 -112078197 + LTR41 LTR ERVL 65 187 -586 314 228 84 109 chr10 28238827 28238950 -112077815 + LTR41 LTR ERVL 586 690 -105 1032 147 70 0 chr10 28238950 28239107 -112077658 - FAM SINE Alu -7 168 1 314 228 84 109 chr10 28239107 28239211 -112077554 + LTR41 LTR ERVL 690 795 0 30 0 0 0 chr10 28240274 28240304 -112076461 + AT_rich Low_complexity Low_complexity 1 30 0 270 304 140 14 chr10 28240481 28240695 -112076070 + MIR SINE MIR 20 260 -2 1107 197 38 94 chr10 28240965 28241314 -112075451 + MLT1B LTR MaLR 1 321 -69 5783 145 25 16 chr10 28242058 28243018 -112073747 - LTR5 LTR ERVK 0 969 1 497 267 62 14 chr10 28246452 28246598 -112070167 - L2 LINE L2 -1 3312 3160 270 287 23 0 chr10 28246736 28246823 -112069942 - MER117 DNA MER1_type -64 133 45 1700 218 0 15 chr10 28246885 28247215 -112069550 + MLT1A1 LTR MaLR 1 325 -40 968 133 144 6 chr10 28247215 28247396 -112069369 + MSTA LTR MaLR 1 206 -222 2316 149 56 30 chr10 28247397 28247915 -112068850 - MLT2A2 LTR ERVL 0 554 1 1002 153 139 20 chr10 28247915 28248117 -112068648 + MSTA LTR MaLR 203 428 0 377 67 0 0 chr10 28248117 28248162 -112068603 + MLT1A1 LTR MaLR 330 374 0 2374 95 0 0 chr10 28248666 28248972 -112067793 - AluSg SINE Alu -4 306 1 1999 113 42 0 chr10 28250277 28250561 -112066204 + AluSx SINE Alu 1 296 -16 36 0 0 0 chr10 28250623 28250659 -112066106 + AT_rich Low_complexity Low_complexity 1 36 0 988 114 11 86 chr10 28250829 28251031 -112065734 - AluSg/x SINE Alu 0 310 132 1584 161 0 8 chr10 28251031 28251286 -112065479 - AluSx SINE Alu -22 290 38 1924 146 13 3 chr10 28252581 28252890 -112063875 + AluJb SINE Alu 1 312 0 2554 42 0 10 chr10 28253025 28253332 -112063433 + AluY SINE Alu 1 304 -7 186 43 0 0 chr10 28253709 28253732 -112063033 + (TG)n Simple_repeat Simple_repeat 2 24 0 774 150 45 0 chr10 28254577 28254710 -112062055 - MER2 DNA MER2_type -25 320 182 4523 99 55 68 chr10 28254766 28255203 -112061562 + L1MA4A LINE L1 5362 5785 -518 2196 125 3 0 chr10 28255203 28255508 -112061257 + AluSg SINE Alu 1 306 -4 4523 99 55 68 chr10 28255508 28255858 -112060907 + L1MA4A LINE L1 5785 6138 -165 2097 101 0 0 chr10 28255958 28256225 -112060540 - AluSg SINE Alu -43 267 1 2083 113 0 30 chr10 28256746 28257047 -112059718 + AluSx SINE Alu 1 292 -20 1839 181 7 0 chr10 28257227 28257536 -112059229 - AluJb SINE Alu -1 311 1 458 129 0 0 chr10 28257842 28257912 -112058853 - Alu SINE Alu -1 309 240 * 615 222 0 22 chr10 28257907 28258042 -112058723 + AluY SINE Alu 98 229 -82 1674 91 0 0 chr10 28258536 28258746 -112058019 + AluSg/x SINE Alu 82 291 -21 342 188 139 30 chr10 28258751 28258852 -112057913 + L1MC5 LINE L1 7646 7757 -204 1582 183 0 14 chr10 28259019 28259308 -112057457 - AluJo SINE Alu -14 298 14 25 31 0 0 chr10 28259347 28259379 -112057386 + AT_rich Low_complexity Low_complexity 1 32 0 3640 109 103 26 chr10 28260390 28261436 -112055329 + MER11A LTR ERVK 1 1232 -4 208 231 77 0 chr10 28261986 28262051 -112054714 + L2 LINE L2 3244 3313 0 916 179 109 10 chr10 28262234 28262435 -112054330 + AluJo SINE Alu 85 305 -7 233 88 0 0 chr10 28262783 28262817 -112053948 - L1P LINE L1 -878 5287 5254 * 6629 206 9 10 chr10 28262788 28264183 -112052582 - L1 LINE L1 -864 5282 3889 1756 143 3 40 chr10 28264311 28264611 -112052154 + AluJo SINE Alu 1 289 -23 325 91 0 254 chr10 28264939 28265049 -112051716 - L1MA10 LINE L1 -2 6332 6251 21 0 0 0 chr10 28265571 28265592 -112051173 + GC_rich Low_complexity Low_complexity 1 21 0 1362 180 112 25 chr10 28266230 28266508 -112050257 - AluJo SINE Alu 0 302 1 1284 148 5 0 chr10 28266721 28266917 -112049848 - AluSg/x SINE Alu -16 294 98 282 29 0 0 chr10 28267384 28267419 -112049346 + (CA)n Simple_repeat Simple_repeat 2 36 0 1624 166 34 88 chr10 28267524 28267623 -112049142 + MLT1A1 LTR MaLR 1 104 -261 2306 132 24 32 chr10 28267623 28268001 -112048764 - THE1C LTR MaLR 0 375 1 1624 166 34 88 chr10 28268001 28268180 -112048585 + MLT1A1 LTR MaLR 104 255 -110 2627 190 34 58 chr10 28268180 28268806 -112047959 + LTR9 LTR ERV1 2 612 0 1624 166 34 88 chr10 28268806 28268912 -112047853 + MLT1A1 LTR MaLR 255 365 0 243 0 0 0 chr10 28269061 28269088 -112047677 + (TG)n Simple_repeat Simple_repeat 2 28 0 2043 86 27 38 chr10 28269088 28269380 -112047385 - AluY SINE Alu -22 289 1 382 259 107 56 chr10 28269380 28269596 -112047169 - MIR SINE MIR -13 249 23 5806 65 0 0 chr10 28270082 28270778 -112045987 + L1PA5 LINE L1 5453 6148 -6 2227 123 0 0 chr10 28270940 28271248 -112045517 - AluSx SINE Alu 0 312 5 2287 65 0 0 chr10 28271735 28272010 -112044755 - L1PA5 LINE L1 -1 6153 5879 810 42 0 0 chr10 28272011 28272107 -112044658 + L1PA5 LINE L1 5794 5889 -265 457 277 90 86 chr10 28272395 28272422 -112044343 + L2 LINE L2 1727 1752 -1562 1463 209 11 4 chr10 28272422 28272700 -112044065 - AluJo SINE Alu -32 280 1 457 277 90 86 chr10 28272700 28273195 -112043570 + L2 LINE L2 1752 2251 -1063 656 305 71 20 chr10 28273342 28273637 -112043128 - HERV16 LTR ERVL -4685 311 2 1435 249 26 13 chr10 28273639 28274025 -112042740 - LTR16A LTR ERVL -1 449 59 341 222 170 46 chr10 28274062 28274215 -112042550 + MIR SINE MIR 91 262 0 25 0 0 0 chr10 28274237 28274262 -112042503 + AT_rich Low_complexity Low_complexity 1 25 0 2397 93 0 0 chr10 28274321 28274631 -112042134 - AluY SINE Alu -1 310 1 181 250 76 76 chr10 28274653 28274745 -112042020 + L2 LINE L2 3124 3215 -98 495 289 31 31 chr10 28274854 28275082 -112041683 + L2 LINE L2 567 794 -2520 292 200 24 40 chr10 28276042 28276167 -112040598 + (TA)n Simple_repeat Simple_repeat 1 123 0 3591 75 10 20 chr10 28276350 28276859 -112039906 + L1PA8 LINE L1 5594 6097 -75 332 293 71 87 chr10 28277003 28277339 -112039426 - L1MC/D LINE L1 -2054 5754 5427 5201 81 6 0 chr10 28277339 28277997 -112038768 + L1PA8 LINE L1 5511 6172 0 332 293 71 87 chr10 28277997 28278168 -112038597 - L1MC/D LINE L1 -2381 5427 5255 32 43 0 0 chr10 28278462 28278508 -112038257 + AT_rich Low_complexity Low_complexity 1 46 0 230 81 27 0 chr10 28278518 28278555 -112038210 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1013 233 173 67 chr10 28278582 28278912 -112037853 - MSTD LTR MaLR 0 396 1 25 0 0 0 chr10 28279542 28279567 -112037198 + AT_rich Low_complexity Low_complexity 1 25 0 469 332 48 34 chr10 28279578 28280054 -112036711 - L1MC/D LINE L1 -2006 4140 3658 972 166 0 0 chr10 28280483 28280634 -112036131 + FAM SINE Alu 20 170 -15 24 0 0 0 chr10 28280689 28280713 -112036052 + AT_rich Low_complexity Low_complexity 1 24 0 318 233 217 0 chr10 28281530 28281659 -112035106 + L1MCc LINE L1 1378 1534 -4889 243 294 99 41 chr10 28281896 28282117 -112034648 + L1MCc LINE L1 1773 2006 -4925 1856 159 0 0 chr10 28282117 28282394 -112034371 + AluSx SINE Alu 1 277 -35 369 0 0 0 chr10 28282398 28282439 -112034326 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 226 214 0 36 chr10 28282451 28282507 -112034258 + L1MCc LINE L1 2026 2079 -5043 571 217 37 56 chr10 28282672 28282833 -112033932 - MER5B DNA MER1_type -4 174 17 1904 152 0 34 chr10 28283132 28283455 -112033310 + AluSx SINE Alu 1 312 0 364 200 211 0 chr10 28283911 28284006 -112032759 + L1MA8 LINE L1 5989 6103 -188 1085 141 6 0 chr10 28284006 28284169 -112032596 + FRAM SINE Alu 1 158 -18 996 148 38 11 chr10 28284172 28284355 -112032410 + L1MA8 LINE L1 6099 6286 -5 180 0 0 0 chr10 28284356 28284376 -112032389 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1746 125 3 81 chr10 28284380 28284677 -112032088 - AluSx SINE Alu -38 274 1 1666 185 0 30 chr10 28285185 28285487 -112031278 + AluJb SINE Alu 1 293 -19 1010 283 83 26 chr10 28286208 28286558 -112030207 - MLT1J LTR MaLR -30 481 112 286 214 0 29 chr10 28287610 28287680 -112029085 + GA-rich Low_complexity Low_complexity 1 68 0 2088 135 3 0 chr10 28287763 28288060 -112028705 + AluSx SINE Alu 1 298 -14 840 185 0 0 chr10 28288071 28288206 -112028559 + FLAM_C SINE Alu 2 136 -7 1662 201 7 3 chr10 28288216 28288519 -112028246 + AluJo SINE Alu 3 306 -6 756 190 14 7 chr10 28289210 28289352 -112027413 + FRAM SINE Alu 2 144 -32 276 309 94 42 chr10 28289371 28289562 -112027203 - L2 LINE L2 -411 2903 2703 405 369 45 11 chr10 28289577 28289756 -112027009 + MIR SINE MIR 11 195 -67 780 165 8 0 chr10 28289759 28289880 -112026885 + FLAM_C SINE Alu 2 123 -20 631 333 183 0 chr10 28289902 28290262 -112026503 - L2 LINE L2 -605 2709 2284 883 256 70 32 chr10 28290444 28290760 -112026005 + LTR37A LTR ERV1 99 426 0 962 208 15 34 chr10 28291166 28291431 -112025334 + L1M4 LINE L1 4904 5163 -983 2063 137 0 0 chr10 28291703 28292026 -112024739 - AluSx SINE Alu 0 323 1 7966 31 2 0 chr10 28292128 28293401 -112023364 - L1PA4 LINE L1 -6 6149 4875 539 175 0 53 chr10 28293575 28293689 -112023076 + FLAM_A SINE Alu 35 142 0 1682 171 4 7 chr10 28294305 28294585 -112022180 + AluJo SINE Alu 9 287 -25 1555 160 23 4 chr10 28294657 28294913 -112021852 - L1PA16 LINE L1 0 6166 5906 2355 229 38 72 chr10 28295053 28295754 -112021011 - L1ME1 LINE L1 -4 6162 5488 735 157 0 82 chr10 28295754 28295888 -112020877 - FLAM_A SINE Alu -10 123 1 2355 229 38 72 chr10 28295888 28295954 -112020811 - L1ME1 LINE L1 -678 5488 5421 1336 180 85 39 chr10 28295995 28296278 -112020487 + AluJo SINE Alu 1 296 -16 323 302 0 12 chr10 28296285 28296371 -112020394 - MER5B DNA MER1_type -91 87 3 2760 137 66 15 chr10 28296627 28296961 -112019804 + L1MC3 LINE L1 5262 5628 -2157 4089 94 73 25 chr10 28296961 28297565 -112019200 + LTR10E LTR ERV1 1 633 0 2760 137 66 15 chr10 28297565 28297698 -112019067 + L1MC3 LINE L1 5628 5753 -2032 381 73 59 29 chr10 28297698 28297729 -112019036 + MER41D LTR ERV1 1 30 -527 2164 105 34 7 chr10 28297729 28298023 -112018742 - AluSg SINE Alu -8 302 1 381 73 59 29 chr10 28298023 28298059 -112018706 + MER41D LTR ERV1 30 70 -487 2986 171 44 4 chr10 28298059 28298563 -112018202 + MER41D LTR ERV1 29 552 -5 1249 174 0 0 chr10 28298569 28298782 -112017983 + L1MC3 LINE L1 5755 5967 -1818 1921 141 7 0 chr10 28298857 28299141 -112017624 + AluSx SINE Alu 24 309 -3 451 316 46 0 chr10 28299803 28299955 -112016810 + LTR16A LTR ERVL 258 416 -34 252 212 45 0 chr10 28300198 28300264 -112016501 + MLT1K LTR MaLR 509 577 -11 1117 101 0 126 chr10 28300357 28300423 -112016342 + Tigger2a DNA MER2_type 1 74 -2634 2446 80 3 3 chr10 28300423 28300734 -112016031 - AluY SINE Alu 0 311 1 1117 101 0 126 chr10 28300734 28300874 -112015891 + Tigger2a DNA MER2_type 74 181 -253 1668 129 16 4 chr10 28301032 28301287 -112015478 + Tigger2a DNA MER2_type 187 444 0 21 57 0 0 chr10 28301759 28301794 -112014971 + AT_rich Low_complexity Low_complexity 1 35 0 934 162 0 0 chr10 28301964 28302100 -112014665 + MER1A DNA MER1_type 1 136 -391 2654 101 6 8 chr10 28302100 28302465 -112014300 - THE1B LTR MaLR 0 364 1 * 3049 92 8 0 chr10 28302465 28302841 -112013924 + MER1A DNA MER1_type 132 510 -19 351 243 157 0 chr10 28302867 28303007 -112013758 - MLT1F1 LTR MaLR -40 527 366 274 257 103 18 chr10 28303140 28303268 -112013497 - MLT1F1 LTR MaLR -371 178 1 2195 108 0 0 chr10 28303671 28303957 -112012808 - AluSx SINE Alu -18 294 9 407 330 179 18 chr10 28304019 28304298 -112012467 + L2 LINE L2 176 499 -2815 204 193 0 84 chr10 28304498 28304581 -112012184 + T-rich Low_complexity Low_complexity 5 80 0 1713 145 58 0 chr10 28304591 28304867 -112011898 - AluJo SINE Alu -20 292 1 286 120 0 40 chr10 28304908 28304958 -112011807 - MER94 DNA DNA -86 48 1 206 319 25 0 chr10 28305026 28305145 -112011620 + L2 LINE L2 774 895 -2419 666 333 58 21 chr10 28305196 28305662 -112011103 + L2 LINE L2 1177 1659 -1655 871 171 12 18 chr10 28305680 28305890 -112010875 + AluJo SINE Alu 120 328 0 1305 316 91 23 chr10 28305890 28305950 -112010815 + L2 LINE L2 1712 1767 -1547 2380 136 31 0 chr10 28305950 28306303 -112010462 + THE1B LTR MaLR 1 364 0 1305 316 91 23 chr10 28306303 28307071 -112009694 + L2 LINE L2 1767 2596 -718 2371 128 35 56 chr10 28307072 28307266 -112009499 + Tigger2a DNA MER2_type 1 198 -2510 1658 169 20 23 chr10 28307266 28307568 -112009197 + AluJo SINE Alu 1 301 -11 2371 128 35 56 chr10 28307568 28307804 -112008961 + Tigger2a DNA MER2_type 198 422 -12 4573 123 22 3 chr10 28307804 28308493 -112008272 + MER50 LTR ERV1 1 702 -32 370 367 107 11 chr10 28308586 28308856 -112007909 + L2 LINE L2 2635 2930 -384 195 255 0 0 chr10 28308858 28308905 -112007860 + L2 LINE L2 2482 2528 -786 1660 169 11 22 chr10 28308937 28309209 -112007556 - AluJo SINE Alu -38 274 6 1009 301 62 24 chr10 28309214 28309681 -112007084 + L2 LINE L2 2516 3001 -312 704 287 58 12 chr10 28309776 28310079 -112006686 + L2 LINE L2 2728 3043 -270 344 60 20 0 chr10 28310083 28310133 -112006632 - MER50 LTR ERV1 -544 190 140 196 30 61 0 chr10 28310151 28310184 -112006581 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 763 81 65 0 chr10 28310185 28310309 -112006456 + Tigger2a DNA MER2_type 195 326 -118 729 104 0 9 chr10 28310311 28310417 -112006348 - MER50 LTR ERV1 -629 105 1 1441 134 28 28 chr10 28310417 28310671 -112006094 - Tigger2 DNA MER2_type -12 2706 2453 323 253 66 36 chr10 28310683 28310849 -112005916 + L2 LINE L2 3057 3227 -86 624 266 60 52 chr10 28311145 28311397 -112005368 - L1MC/D LINE L1 -2077 5731 5478 270 0 0 0 chr10 28311801 28311831 -112004934 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 273 299 24 39 chr10 28313659 28313786 -112002979 + MIR3 SINE MIR 43 167 -41 23 0 0 0 chr10 28314422 28314445 -112002320 + AT_rich Low_complexity Low_complexity 1 23 0 199 271 157 0 chr10 28315454 28315524 -112001241 - MIR SINE MIR -142 120 40 229 230 115 106 chr10 28316219 28316332 -112000433 - L1ME3 LINE L1 -81 6081 5968 1399 110 0 11 chr10 28316639 28316830 -111999935 + AluSx SINE Alu 1 189 -123 1441 165 31 39 chr10 28317304 28317564 -111999201 - AluJb SINE Alu -54 258 1 1549 230 228 29 chr10 28317611 28318372 -111998393 - L2 LINE L2 -40 3273 2346 337 243 39 29 chr10 28318437 28318540 -111998225 - MIR SINE MIR -89 173 70 2182 96 0 4 chr10 28318550 28318822 -111997943 + AluSc SINE Alu 7 277 -32 746 50 0 10 chr10 28318823 28318923 -111997842 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 814 126 7 63 chr10 28319138 28319281 -111997484 - FLAM_C SINE Alu -7 136 2 780 160 112 0 chr10 28320455 28320580 -111996185 + FRAM SINE Alu 1 139 -37 293 42 0 42 chr10 28320582 28320630 -111996135 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 316 305 0 24 chr10 28320632 28320714 -111996051 - L2 LINE L2 -93 3179 3100 2187 82 10 16 chr10 28320822 28321127 -111995638 + AluY SINE Alu 5 307 -4 407 218 0 0 chr10 28321361 28321448 -111995317 - MER33 DNA MER1_type 0 324 238 456 169 14 0 chr10 28321452 28321523 -111995242 - AluJ/FRAM SINE Alu -17 295 224 850 143 24 0 chr10 28321532 28321658 -111995107 - FLAM_C SINE Alu -10 133 5 38 51 0 0 chr10 28321845 28321904 -111994861 + AT_rich Low_complexity Low_complexity 1 59 0 801 145 0 8 chr10 28321934 28322051 -111994714 - AluJb SINE Alu -178 134 19 906 138 31 0 chr10 28322060 28322219 -111994546 - MER33 DNA MER1_type -160 164 1 207 146 0 0 chr10 28323011 28323052 -111993713 + (TG)n Simple_repeat Simple_repeat 1 41 0 286 273 162 0 chr10 28323152 28323251 -111993514 - MIR SINE MIR 0 262 148 1729 171 14 0 chr10 28323456 28323742 -111993023 + AluJo SINE Alu 3 292 -20 361 182 15 0 chr10 28323939 28324005 -111992760 + MIR SINE MIR 183 249 -13 2160 117 0 19 chr10 28324414 28324722 -111992043 - AluSx SINE Alu -10 302 1 30 27 0 0 chr10 28324862 28324899 -111991866 + AT_rich Low_complexity Low_complexity 1 37 0 812 152 0 8 chr10 28324990 28325115 -111991650 - FLAM_C SINE Alu -19 124 1 251 342 8 17 chr10 28325396 28325513 -111991252 + MIR3 SINE MIR 89 204 -4 338 189 78 22 chr10 28325953 28326043 -111990722 - MIR SINE MIR -96 166 72 350 264 168 0 chr10 28326255 28326380 -111990385 + MIR SINE MIR 101 246 -16 1483 153 71 0 chr10 28326400 28326655 -111990110 - L1PB4 LINE L1 0 6156 5884 839 298 52 87 chr10 28327398 28327515 -111989250 + L1MB8 LINE L1 5328 5420 -758 4849 93 61 12 chr10 28327515 28327885 -111988880 + L1MA2 LINE L1 5552 5902 -402 1798 112 0 135 chr10 28327885 28328241 -111988524 + AluSg1 SINE Alu 1 308 -1 4849 93 61 12 chr10 28328241 28328575 -111988190 + L1MA2 LINE L1 5902 6304 0 839 298 52 87 chr10 28328575 28328675 -111988090 + L1MB8 LINE L1 5420 5522 -656 2065 81 50 11 chr10 28328973 28329256 -111987509 + AluSg SINE Alu 1 294 -16 1570 169 49 20 chr10 28329449 28329956 -111986809 + L1MB8 LINE L1 5565 6139 -39 209 354 33 74 chr10 28330055 28330298 -111986467 - L2 LINE L2 -400 2914 2682 1018 154 0 0 chr10 28330329 28330485 -111986280 + AluJb SINE Alu 147 302 -10 323 341 116 0 chr10 28331293 28331466 -111985299 + MIR SINE MIR 68 260 -2 1348 245 142 18 chr10 28331474 28331981 -111984784 - MLT1G LTR MaLR 0 590 21 821 178 0 0 chr10 28332098 28332233 -111984532 + AluJo SINE Alu 1 135 -177 1681 205 0 0 chr10 28332233 28332526 -111984239 + AluJo SINE Alu 1 293 -19 971 94 0 16 chr10 28332658 28332785 -111983980 - AluSq/x SINE Alu -187 125 1 539 181 21 0 chr10 28332966 28333060 -111983705 - MER5A DNA MER1_type 0 189 94 1137 200 0 19 chr10 28333065 28333275 -111983490 + AluJo SINE Alu 77 282 -30 368 167 119 36 chr10 28333288 28333372 -111983393 - MER5A DNA MER1_type -98 91 1 403 299 157 10 chr10 28333534 28333738 -111983027 - MIR SINE MIR -7 255 22 620 88 0 0 chr10 28334184 28334264 -111982501 - MADE1 DNA Mariner 0 80 1 578 113 127 0 chr10 28334681 28334823 -111981942 - Tigger3(Golem) DNA MER2_type -504 2525 2366 2061 120 36 3 chr10 28334828 28335129 -111981636 - AluSx SINE Alu -1 311 1 1846 137 7 42 chr10 28335173 28335480 -111981285 - L1PA16 LINE L1 -1 6165 5870 2088 156 11 22 chr10 28335654 28335834 -111980931 + MER47A DNA MER2_type 4 180 -2143 2174 118 0 7 chr10 28335834 28336138 -111980627 + AluSx SINE Alu 1 302 -10 2088 156 11 22 chr10 28336138 28336322 -111980443 + MER47A DNA MER2_type 180 364 -2 774 261 14 24 chr10 28336547 28336765 -111980000 - MIR SINE MIR -9 253 37 2175 101 3 3 chr10 28337264 28337562 -111979203 - AluSc SINE Alu -11 298 1 303 28 0 0 chr10 28338149 28338185 -111978580 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2121 124 7 7 chr10 28338236 28338543 -111978222 + AluSx SINE Alu 1 307 -5 605 311 95 10 chr10 28338699 28339005 -111977760 - HsTC2 DNA Tc2 -1068 830 499 348 279 47 100 chr10 28339027 28339311 -111977454 - HsTC2 DNA Tc2 -1609 289 28 2177 125 7 0 chr10 28339311 28339614 -111977151 + AluSx SINE Alu 1 305 -7 348 279 47 100 chr10 28339614 28339640 -111977125 - HsTC2 DNA Tc2 -1870 28 2 613 213 45 0 chr10 28340073 28340228 -111976537 + L1MA8 LINE L1 6130 6291 0 2181 126 7 0 chr10 28340701 28341011 -111975754 - AluSx SINE Alu 0 312 1 374 297 64 8 chr10 28341145 28341328 -111975437 + MIR SINE MIR 15 201 -61 1968 134 26 23 chr10 28341542 28341653 -111975112 + AluJo SINE Alu 7 116 -196 1578 110 9 0 chr10 28341653 28341872 -111974893 - AluSg/x SINE Alu -16 294 74 1968 134 26 23 chr10 28341872 28342065 -111974700 + AluJo SINE Alu 116 312 0 325 259 35 17 chr10 28342089 28342205 -111974560 - L1MC4 LINE L1 -6 8036 7919 2370 110 0 0 chr10 28342384 28342694 -111974071 - AluSx SINE Alu -2 310 1 679 226 126 50 chr10 28342707 28342946 -111973819 - L1MC4 LINE L1 -491 7551 7295 189 368 15 0 chr10 28343244 28343312 -111973453 - L2 LINE L2 -44 3228 3160 1126 176 45 10 chr10 28343336 28343535 -111973230 - AluJo SINE Alu -23 289 84 531 299 227 20 chr10 28343549 28343950 -111972815 - L2 LINE L2 0 3313 2830 546 147 0 0 chr10 28343998 28344073 -111972692 + AluS SINE Alu 2 76 -237 1170 107 6 0 chr10 28344073 28344232 -111972533 + AluSc SINE Alu 145 304 -5 447 180 279 6 chr10 28344240 28344401 -111972364 - L2 LINE L2 -1059 2255 2051 532 167 0 211 chr10 28344403 28344630 -111972135 - MER69 DNA AcHobo -1 2525 2347 35 24 0 0 chr10 28344649 28344691 -111972074 + AT_rich Low_complexity Low_complexity 1 42 0 585 213 82 16 chr10 28344974 28345157 -111971608 - MER69 DNA AcHobo -246 2280 2086 260 234 26 39 chr10 28345636 28345713 -111971052 - MER69 DNA AcHobo -101 76 1 624 223 95 0 chr10 28345715 28345863 -111970902 - L2 LINE L2 -1262 2052 1891 914 118 0 15 chr10 28345908 28346043 -111970722 - FLAM_C SINE Alu 0 143 11 306 331 63 21 chr10 28346052 28346194 -111970571 - L2 LINE L2 -1408 1906 1759 1702 161 25 38 chr10 28346757 28347073 -111969692 - AluJo SINE Alu 0 312 1 387 0 0 0 chr10 28347114 28347157 -111969608 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 0 0 0 chr10 28347964 28347987 -111968778 + AT_rich Low_complexity Low_complexity 1 23 0 2004 107 3 17 chr10 28348113 28348402 -111968363 + AluSq SINE Alu 22 306 -7 498 261 53 37 chr10 28348584 28348772 -111967993 + MIR SINE MIR 72 262 0 1206 181 0 0 chr10 28348994 28349198 -111967567 - AluJo SINE Alu -8 304 101 2091 96 11 7 chr10 28349581 28349885 -111966880 - AluSx SINE Alu 0 305 1 229 247 169 11 chr10 28350649 28350738 -111966027 + MIR SINE MIR 20 122 -86 387 262 135 14 chr10 28350875 28351016 -111965749 - MIR SINE MIR -48 214 57 938 118 0 22 chr10 28351227 28351362 -111965403 + FLAM_C SINE Alu 1 132 -1 31 0 0 0 chr10 28351367 28351398 -111965367 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr10 28352491 28352511 -111964254 + (TC)n Simple_repeat Simple_repeat 2 21 0 1848 141 17 0 chr10 28353521 28353812 -111962953 - AluJo SINE Alu -16 296 1 2079 130 0 0 chr10 28355022 28355331 -111961434 + AluSx SINE Alu 1 309 0 394 206 152 78 chr10 28355581 28355622 -111961143 + L1MC5 LINE L1 7671 7708 -253 2182 123 0 0 chr10 28355622 28355923 -111960842 + AluSq SINE Alu 1 301 -12 394 206 152 78 chr10 28355923 28356124 -111960641 + L1MC5 LINE L1 7708 7931 -30 2204 125 3 0 chr10 28356276 28356587 -111960178 + AluSx SINE Alu 1 312 0 225 256 209 39 chr10 28356590 28356719 -111960046 - MIR3 SINE MIR -23 185 35 2302 93 0 0 chr10 28357039 28357329 -111959436 - AluSx SINE Alu -10 302 13 5887 148 35 43 chr10 28357776 28358856 -111957909 - MER11C LTR ERVK 0 1071 1 1398 149 0 5 chr10 28359125 28359333 -111957432 - AluJb SINE Alu -21 291 85 2188 128 3 0 chr10 28359825 28360129 -111956636 + AluSg SINE Alu 1 305 -5 2265 108 0 0 chr10 28360276 28360573 -111956192 - AluSc SINE Alu 0 309 13 884 115 0 65 chr10 28360767 28360906 -111955859 + FLAM_C SINE Alu 2 131 -2 460 69 69 0 chr10 28361167 28361283 -111955482 + (TA)n Simple_repeat Simple_repeat 1 124 0 46 33 0 0 chr10 28362061 28362121 -111954644 + AT_rich Low_complexity Low_complexity 1 60 0 1759 156 60 23 chr10 28362185 28362486 -111954279 + AluJo SINE Alu 1 312 0 1707 104 0 0 chr10 28362549 28362771 -111953994 + AluY SINE Alu 1 222 -89 1296 149 0 5 chr10 28362789 28362990 -111953775 - AluSq SINE Alu -113 200 1 1954 113 0 0 chr10 28363282 28363539 -111953226 - AluSx SINE Alu -55 257 1 1997 139 7 0 chr10 28363739 28364034 -111952731 + AluSx SINE Alu 1 297 -15 1713 134 4 12 chr10 28364510 28364764 -111952001 + AluJo SINE Alu 17 268 -44 606 143 0 0 chr10 28364764 28364848 -111951917 + AluSg/x SINE Alu 217 300 -10 2088 164 0 0 chr10 28365441 28365753 -111951012 + AluJb SINE Alu 1 312 0 2300 94 0 3 chr10 28367872 28368170 -111948595 + AluY SINE Alu 1 297 -14 392 151 55 0 chr10 28368490 28368563 -111948202 + L1MA3 LINE L1 6173 6249 -56 2384 94 0 0 chr10 28368866 28369175 -111947590 + AluY SINE Alu 1 309 -2 2263 114 0 7 chr10 28369940 28370246 -111946519 + AluSx SINE Alu 1 304 -8 1597 159 58 7 chr10 28370291 28370568 -111946197 - AluJo SINE Alu -21 291 1 197 211 410 0 chr10 28370885 28370980 -111945785 + L2 LINE L2 1023 1156 -2158 905 126 0 8 chr10 28371030 28371157 -111945608 - FLAM_C SINE Alu -7 126 1 659 305 11 21 chr10 28371157 28371344 -111945421 + L2 LINE L2 1374 1558 -1756 735 267 61 16 chr10 28371359 28371753 -111945012 + L2 LINE L2 2720 3143 -170 1679 157 4 4 chr10 28371782 28372043 -111944722 - AluJo SINE Alu -34 278 18 328 143 0 0 chr10 28372091 28372140 -111944625 + AluJ/FLAM SINE Alu 18 66 -236 228 230 14 54 chr10 28372213 28372287 -111944478 + L2 LINE L2 3214 3284 -29 440 243 209 51 chr10 28372492 28372723 -111944042 - L2 LINE L2 -337 2977 2689 1712 154 13 27 chr10 28372723 28373022 -111943743 + AluJo SINE Alu 1 295 -17 440 243 209 51 chr10 28373022 28373082 -111943683 - L2 LINE L2 -625 2689 2640 25 51 0 0 chr10 28373994 28374033 -111942732 + AT_rich Low_complexity Low_complexity 1 39 0 520 204 54 0 chr10 28375106 28375199 -111941566 + 5S rRNA rRNA 6 103 -18 2219 123 0 0 chr10 28375470 28375780 -111940985 - AluSg SINE Alu 0 310 1 1700 176 0 11 chr10 28375963 28376247 -111940518 + AluJo SINE Alu 1 281 -31 378 0 0 0 chr10 28376247 28376289 -111940476 + (CA)n Simple_repeat Simple_repeat 1 42 0 1943 145 0 10 chr10 28376571 28376860 -111939905 + AluSx SINE Alu 1 286 -26 211 172 0 250 chr10 28376989 28377117 -111939648 + L2 LINE L2 3137 3232 -40 829 136 0 0 chr10 28377523 28377641 -111939124 - FLAM_C SINE Alu -15 118 1 921 157 0 0 chr10 28378134 28378274 -111938491 - AluJb SINE Alu -28 284 145 751 177 197 14 chr10 28378648 28378795 -111937970 + FAM SINE Alu 2 175 0 2021 92 33 11 chr10 28379273 28379546 -111937219 - AluSc SINE Alu -30 279 1 2134 109 3 38 chr10 28380373 28380693 -111936072 - AluSc SINE Alu 0 309 1 312 218 38 45 chr10 28380713 28380846 -111935919 - MLT1J2 LTR MaLR 0 466 351 596 250 14 14 chr10 28380935 28381079 -111935686 - MLT1J LTR MaLR -312 199 56 628 268 59 117 chr10 28381371 28381610 -111935155 - MER34 LTR ERV1 -18 524 273 2956 104 21 52 chr10 28381610 28381786 -111934979 - MER4C LTR ERV1 0 465 285 1931 124 40 7 chr10 28381786 28382085 -111934680 + AluSx SINE Alu 2 310 -2 2956 104 21 52 chr10 28382085 28382387 -111934378 - MER4C LTR ERV1 -180 285 2 628 268 59 117 chr10 28382387 28382703 -111934062 - MER34 LTR ERV1 -269 273 1 620 198 62 62 chr10 28382740 28382967 -111933798 - L1ME3A LINE L1 -39 6131 5905 1056 173 14 36 chr10 28382968 28383188 -111933577 - AluJb SINE Alu -18 294 80 1882 234 22 44 chr10 28383212 28383469 -111933296 - L1ME3A LINE L1 -316 5854 5593 2057 143 7 0 chr10 28383469 28383776 -111932989 - AluSx SINE Alu -3 309 1 1522 109 24 0 chr10 28383778 28383988 -111932777 - AluSg/x SINE Alu -14 298 84 1882 234 22 44 chr10 28383988 28384269 -111932496 - L1ME3A LINE L1 -578 5592 5325 2214 128 103 35 chr10 28384481 28384553 -111932212 - MSTA LTR MaLR 0 428 362 1921 96 0 57 chr10 28384553 28384833 -111931932 + AluSq SINE Alu 38 301 -12 2214 128 103 35 chr10 28384833 28385157 -111931608 - MSTA LTR MaLR -66 362 5 434 153 0 214 chr10 28385525 28385656 -111931109 + AluJb SINE Alu 1 103 -209 984 251 0 18 chr10 28385656 28385883 -111930882 + MSTD LTR MaLR 174 396 0 2438 180 136 103 chr10 28387155 28387286 -111929479 - Charlie2 DNA MER1_type -1 2861 2736 2256 115 0 0 chr10 28387286 28387574 -111929191 - AluSx SINE Alu -24 288 1 2438 180 136 103 chr10 28387574 28387727 -111929038 - Charlie2 DNA MER1_type -126 2736 2589 1276 179 27 0 chr10 28387727 28387950 -111928815 - L1MC1 LINE L1 0 6333 6105 2438 180 136 103 chr10 28387950 28388258 -111928507 - Charlie2 DNA MER1_type -273 2589 2293 2097 87 55 45 chr10 28388258 28388568 -111928197 + AluSq SINE Alu 1 313 0 2438 180 136 103 chr10 28388568 28388916 -111927849 - Charlie2 DNA MER1_type -569 2293 1888 483 273 212 0 chr10 28388929 28389127 -111927638 - Charlie2 DNA MER1_type -2532 330 91 767 176 15 15 chr10 28389210 28389341 -111927424 + FLAM_C SINE Alu 1 131 -2 640 224 203 10 chr10 28389525 28389880 -111926885 + MER39 LTR ERV1 9 469 -238 1755 187 17 28 chr10 28389924 28390277 -111926488 - MER4D LTR ERV1 -8 895 547 683 182 6 12 chr10 28390276 28390424 -111926341 - MER4E LTR ERV1 -589 283 28 * 291 157 0 0 chr10 28390441 28390492 -111926273 + CT-rich Low_complexity Low_complexity 2 52 0 1862 155 28 0 chr10 28390524 28390815 -111925950 + AluJb SINE Alu 1 299 -13 896 179 27 11 chr10 28390835 28391019 -111925746 + MER39 LTR ERV1 521 707 0 1177 228 131 60 chr10 28391146 28391641 -111925124 - MER39 LTR ERV1 0 707 1 350 232 36 72 chr10 28391928 28391956 -111924809 - L1ME4a LINE L1 0 6121 6094 2207 92 0 3 chr10 28391956 28392260 -111924505 + AluSc SINE Alu 1 303 0 350 232 36 72 chr10 28392260 28392368 -111924397 - L1ME4a LINE L1 -27 6094 5989 1950 139 23 7 chr10 28392783 28393084 -111923681 + AluJo SINE Alu 1 306 -6 2354 98 3 0 chr10 28393203 28393509 -111923256 - AluSq SINE Alu -6 307 1 443 258 15 22 chr10 28393594 28393782 -111922983 - MLT1H LTR MaLR -221 192 36 240 357 110 34 chr10 28393818 28394081 -111922684 + L2 LINE L2 2870 3152 -120 1805 165 0 0 chr10 28394172 28394445 -111922320 + AluJo SINE Alu 1 273 -39 2148 138 0 6 chr10 28395145 28395456 -111921309 - AluSx SINE Alu -1 311 3 619 152 0 0 chr10 28395605 28395704 -111921061 - L1MB4 LINE L1 0 6180 6082 844 173 0 8 chr10 28395746 28395879 -111920886 - FLAM_A SINE Alu -1 132 1 2468 71 0 0 chr10 28395927 28396221 -111920544 + AluSg SINE Alu 1 294 -16 533 248 118 7 chr10 28396238 28396391 -111920374 + MIR SINE MIR 64 233 -29 1886 128 57 4 chr10 28396589 28396870 -111919895 + AluSg SINE Alu 1 296 -14 2504 54 0 0 chr10 28396904 28397198 -111919567 + AluY SINE Alu 1 294 -17 966 157 13 7 chr10 28397320 28397473 -111919292 + FRAM SINE Alu 2 155 -21 479 252 224 0 chr10 28397490 28397637 -111919128 - MER5A DNA MER1_type -8 181 2 1930 147 0 26 chr10 28397990 28398297 -111918468 - AluJo SINE Alu -2 310 12 251 248 74 33 chr10 28398473 28398594 -111918171 + Charlie8 DNA MER1_type 116 241 -2176 861 165 0 0 chr10 28399698 28399831 -111916934 + FLAM_A SINE Alu 1 133 0 300 192 10 101 chr10 28399981 28400080 -111916685 + Charlie8 DNA MER1_type 123 212 -2205 28 71 0 0 chr10 28400611 28400667 -111916098 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 28400795 28400826 -111915939 + AT_rich Low_complexity Low_complexity 1 31 0 1897 101 14 0 chr10 28400835 28401111 -111915654 - L1MA1 LINE L1 0 6302 6023 313 276 191 13 chr10 28401273 28401425 -111915340 - MIR SINE MIR -81 181 3 1792 144 6 58 chr10 28402103 28402429 -111914336 - AluJb SINE Alu -3 309 1 387 295 105 57 chr10 28403097 28403169 -111913596 + L1ME4a LINE L1 3997 4064 -2082 2025 148 0 3 chr10 28403169 28403472 -111913293 + AluSx SINE Alu 1 302 -10 387 295 105 57 chr10 28403472 28403879 -111912886 + L1ME4a LINE L1 4064 4515 -1631 2480 67 0 3 chr10 28403879 28404176 -111912589 + AluSg SINE Alu 1 296 -14 387 295 105 57 chr10 28404176 28404286 -111912479 + L1ME4a LINE L1 4515 4618 -1528 365 248 81 6 chr10 28404484 28404645 -111912120 + L1ME4a LINE L1 4882 5054 -1092 1701 174 16 7 chr10 28404647 28404951 -111911814 + AluJo SINE Alu 1 307 -5 431 111 0 14 chr10 28404961 28405033 -111911732 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 365 278 125 44 chr10 28405034 28405812 -111910953 + L1ME4a LINE L1 5040 5885 -236 636 155 0 0 chr10 28405812 28405909 -111910856 + AluJ/FLAM SINE Alu 2 98 -214 33 0 0 0 chr10 28406010 28406043 -111910722 + AT_rich Low_complexity Low_complexity 1 33 0 1193 89 0 0 chr10 28406696 28406854 -111909911 - L1MA5A LINE L1 0 6297 6140 1789 174 3 0 chr10 28407686 28407974 -111908791 - AluJb SINE Alu -23 289 1 21 57 0 0 chr10 28408312 28408347 -111908418 + AT_rich Low_complexity Low_complexity 1 35 0 963 177 62 29 chr10 28408381 28408590 -111908175 + MER20 DNA MER1_type 1 216 -3 2161 119 3 3 chr10 28408703 28409015 -111907750 + AluSx SINE Alu 1 312 0 209 227 0 106 chr10 28409040 28409106 -111907659 + L2 LINE L2 3208 3266 -47 * 688 272 141 12 chr10 28409103 28409423 -111907342 - L2 LINE L2 -58 3255 2895 266 234 16 0 chr10 28409559 28409623 -111907142 - MIR SINE MIR -179 83 19 295 306 111 0 chr10 28409830 28409938 -111906827 + MER5A DNA MER1_type 7 126 -63 2183 96 0 51 chr10 28410861 28410997 -111905768 + AluSx SINE Alu 1 142 -170 2797 19 0 0 chr10 28410997 28411308 -111905457 + AluY SINE Alu 1 311 0 2183 96 0 51 chr10 28411308 28411485 -111905280 + AluSx SINE Alu 142 298 -14 296 325 152 10 chr10 28411574 28411771 -111904994 + MIR SINE MIR 38 262 0 674 178 76 0 chr10 28411804 28411922 -111904843 - MER5A DNA MER1_type 0 189 63 6380 209 84 76 chr10 28411946 28412924 -111903841 - L1MA6 LINE L1 -1 6503 5534 2237 99 0 16 chr10 28412924 28413263 -111903502 - AluSq SINE Alu 0 313 1 6380 209 84 76 chr10 28413263 28413705 -111903060 - L1MA6 LINE L1 -970 5534 5097 1194 163 0 0 chr10 28413705 28413907 -111902858 - L1PA4 LINE L1 -1 6154 5953 6380 209 84 76 chr10 28413907 28415582 -111901183 - L1MA6 LINE L1 -1407 5097 3240 3127 255 81 28 chr10 28415574 28417132 -111899633 - L1MA6 LINE L1 -4095 1255 74 * 653 248 22 63 chr10 28417278 28417500 -111899265 + L2 LINE L2 3084 3296 -17 537 110 0 0 chr10 28417502 28417584 -111899181 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 1831 162 7 7 chr10 28417633 28417923 -111898842 + AluJo SINE Alu 1 290 -22 1757 187 3 3 chr10 28417932 28418279 -111898486 + AluJo SINE Alu 1 347 0 2516 71 0 0 chr10 28418639 28418936 -111897829 - AluSg SINE Alu -13 297 1 248 271 38 90 chr10 28418959 28418986 -111897779 - L2 LINE L2 0 3313 3286 1706 170 0 21 chr10 28418986 28419274 -111897491 + AluJo SINE Alu 1 282 -30 248 271 38 90 chr10 28419274 28419379 -111897386 - L2 LINE L2 -27 3286 3188 902 226 26 107 chr10 28419819 28420164 -111896601 - MLT1C LTR MaLR -2 465 149 2022 145 3 3 chr10 28420203 28420499 -111896266 - AluJo SINE Alu -16 296 1 694 173 49 37 chr10 28420500 28420662 -111896103 - MLT1C LTR MaLR -303 164 1 1688 189 13 0 chr10 28421209 28421515 -111895250 - AluJo SINE Alu -2 310 1 189 296 153 10 chr10 28421611 28421709 -111895056 + MIR3 SINE MIR 87 198 -10 235 231 0 0 chr10 28422010 28422062 -111894703 - L3b LINE CR1 -1 1582 1531 198 114 29 0 chr10 28423263 28423298 -111893467 + MIR SINE MIR 105 140 -122 336 24 0 0 chr10 28423741 28423782 -111892983 + (CA)n Simple_repeat Simple_repeat 1 41 0 371 304 29 36 chr10 28423987 28424114 -111892651 - L2 LINE L2 -26 3246 3119 1530 199 14 0 chr10 28424114 28424405 -111892360 + AluJo SINE Alu 3 297 -15 1476 148 19 53 chr10 28424905 28425168 -111891597 + AluJo SINE Alu 11 264 -48 1811 105 10 85 chr10 28425224 28425519 -111891246 - AluSx SINE Alu -1 311 39 2389 88 7 0 chr10 28426642 28426980 -111889785 - AluY SINE Alu 0 340 1 347 151 4 0 chr10 28427001 28427076 -111889689 - Alu SINE Alu 0 302 249 1692 175 11 0 chr10 28428132 28428441 -111888324 + AluJo SINE Alu 1 312 0 1113 159 0 0 chr10 28428821 28428991 -111887774 + FRAM SINE Alu 1 170 -6 1901 164 0 0 chr10 28430137 28430447 -111886318 + AluSx SINE Alu 3 312 0 1053 212 47 74 chr10 28431230 28431569 -111885196 - MER87 LTR ERV1 -1 540 211 694 155 17 0 chr10 28431757 28431873 -111884892 + FLAM_A SINE Alu 4 121 -12 1653 199 4 0 chr10 28431887 28432168 -111884597 - AluSx SINE Alu -30 282 1 29 47 0 0 chr10 28432168 28432211 -111884554 + AT_rich Low_complexity Low_complexity 1 43 0 845 88 9 0 chr10 28432388 28432501 -111884264 + AluJb SINE Alu 169 282 -30 34 42 0 0 chr10 28432502 28432550 -111884215 + AT_rich Low_complexity Low_complexity 1 48 0 195 42 0 0 chr10 28432763 28432787 -111883978 + (CCG)n Simple_repeat Simple_repeat 2 25 0 266 121 0 17 chr10 28432895 28432953 -111883812 + (CCCCCG)n Simple_repeat Simple_repeat 5 61 0 21 0 0 0 chr10 28433797 28433818 -111882947 + AT_rich Low_complexity Low_complexity 1 21 0 963 155 72 43 chr10 28435372 28435445 -111881320 - MER30 DNA MER1_type -17 213 144 1664 198 0 3 chr10 28435445 28435733 -111881032 + AluSx SINE Alu 1 287 -25 963 155 72 43 chr10 28435733 28435866 -111880899 - MER30 DNA MER1_type -86 144 1 541 151 0 21 chr10 28436170 28436263 -111880502 + MER65B LTR ERV1 1 91 -440 347 308 139 31 chr10 28436910 28437335 -111879430 - L1MEc LINE L1 -3526 2689 2219 1891 164 0 16 chr10 28437335 28437652 -111879113 - AluJo SINE Alu 0 312 1 243 79 0 0 chr10 28437932 28437970 -111878795 + (CA)n Simple_repeat Simple_repeat 1 38 0 493 299 120 28 chr10 28438003 28438544 -111878221 - L1MEc LINE L1 -4734 1662 1072 2450 159 21 7 chr10 28438559 28438993 -111877772 - L1MC1 LINE L1 0 6333 5894 3314 244 44 35 chr10 28438994 28440086 -111876679 - L1M4 LINE L1 -793 5353 4252 296 228 37 90 chr10 28440419 28440608 -111876157 + L1M4 LINE L1 3878 4056 -2090 1106 273 58 17 chr10 28440635 28440983 -111875782 - MER74A LTR ERVL -17 541 180 849 224 18 0 chr10 28441051 28441221 -111875544 - MER74A LTR ERVL -385 173 1 2162 163 44 21 chr10 28441621 28442050 -111874715 + Tigger6a DNA MER2_type 38 476 -607 234 215 190 0 chr10 28442081 28442160 -111874605 + L1MC5 LINE L1 7287 7380 -581 2370 142 61 17 chr10 28442161 28442535 -111874230 - MSTB LTR MaLR 0 426 31 1698 152 72 36 chr10 28442535 28442897 -111873868 - THE1C LTR MaLR 0 375 1 2370 142 61 17 chr10 28442897 28442930 -111873835 - MSTB LTR MaLR -395 31 1 251 169 52 26 chr10 28442939 28443016 -111873749 + L1MC5 LINE L1 7382 7460 -501 2125 121 0 0 chr10 28443171 28443479 -111873286 + AluSg1 SINE Alu 1 308 0 309 188 70 86 chr10 28443517 28443703 -111873062 + L1MC5 LINE L1 7603 7785 -176 354 203 47 68 chr10 28443744 28443892 -111872873 + L1MC5 LINE L1 7787 7931 -30 2094 118 0 20 chr10 28444005 28444302 -111872463 - AluSq SINE Alu -22 291 1 1519 162 12 0 chr10 28444827 28445074 -111871691 + AluSx SINE Alu 36 285 -27 218 103 0 26 chr10 28445973 28446012 -111870753 + (TA)n Simple_repeat Simple_repeat 2 39 0 600 226 8 0 chr10 28447318 28447442 -111869323 - AluSq/x SINE Alu -186 126 2 216 308 38 15 chr10 28447886 28447992 -111868773 + MIR SINE MIR 44 152 -56 182 147 29 0 chr10 28449802 28449836 -111866929 + MIR SINE MIR 118 152 -56 180 147 29 0 chr10 28451677 28451711 -111865054 + MIR SINE MIR 118 152 -56 180 147 29 0 chr10 28453516 28453550 -111863215 + MIR SINE MIR 118 152 -56 1528 162 0 0 chr10 28453679 28453907 -111862858 - AluSx SINE Alu -84 228 1 237 344 115 13 chr10 28454140 28454297 -111862468 + MIR SINE MIR 24 196 -66 847 193 6 6 chr10 28456337 28456503 -111860262 - L1PB1 LINE L1 -2 6149 5984 1681 179 0 10 chr10 28456507 28456803 -111859962 - AluSx SINE Alu -19 293 1 183 42 0 0 chr10 28457237 28457261 -111859504 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2103 142 0 0 chr10 28457365 28457674 -111859091 - AluSc SINE Alu 0 309 1 25 0 0 0 chr10 28458020 28458045 -111858720 + AT_rich Low_complexity Low_complexity 1 25 0 1778 199 0 0 chr10 28458383 28458690 -111858075 + AluJo SINE Alu 1 307 -5 1848 149 14 3 chr10 28459847 28460142 -111856623 + AluJb SINE Alu 12 309 -3 2144 109 0 3 chr10 28460142 28460463 -111856302 + AluSg SINE Alu 1 320 0 627 126 107 0 chr10 28460624 28460727 -111856038 + AluJb SINE Alu 169 282 -30 32 43 0 0 chr10 28460729 28460775 -111855990 + AT_rich Low_complexity Low_complexity 1 46 0 238 65 0 0 chr10 28461269 28461300 -111855465 - MER30 DNA MER1_type -199 31 1 1530 108 14 0 chr10 28461538 28461751 -111855014 - L1PA10 LINE L1 -5 6163 5948 590 118 0 21 chr10 28461838 28461931 -111854834 + MER65B LTR ERV1 1 91 -440 414 294 58 38 chr10 28462537 28463012 -111853753 - L1M4 LINE L1 -3478 2668 2148 1859 164 6 10 chr10 28463021 28463333 -111853432 - AluJo SINE Alu -1 311 1 1780 179 0 7 chr10 28463424 28463720 -111853045 - AluSx SINE Alu -18 294 1 2177 111 0 3 chr10 28463731 28464028 -111852737 - AluSx SINE Alu -16 296 1 2219 93 3 56 chr10 28464181 28464505 -111852260 - AluSc SINE Alu -2 307 1 2034 130 13 3 chr10 28464707 28465006 -111851759 + AluSg SINE Alu 1 302 -8 746 204 32 55 chr10 28465136 28465356 -111851409 + L2 LINE L2 3098 3312 -1 23 0 0 0 chr10 28465467 28465490 -111851275 + AT_rich Low_complexity Low_complexity 1 23 0 243 299 77 29 chr10 28466668 28466875 -111849890 + L1MEc LINE L1 2240 2456 -3940 2076 105 0 20 chr10 28467095 28467389 -111849376 + AluSx SINE Alu 23 310 -2 330 0 0 24 chr10 28468019 28468061 -111848704 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1684 178 0 11 chr10 28468061 28468348 -111848417 - AluJb SINE Alu -29 283 1 308 244 100 0 chr10 28468627 28468717 -111848048 - MIR SINE MIR -111 151 53 838 204 0 0 chr10 28468794 28468951 -111847814 - FRAM SINE Alu -18 158 2 24 0 0 0 chr10 28469841 28469865 -111846900 + AT_rich Low_complexity Low_complexity 1 24 0 2941 170 33 27 chr10 28469983 28470530 -111846235 - MER44D DNA MER2_type 0 605 1 218 307 251 7 chr10 28470796 28471083 -111845682 + L3b LINE CR1 1112 1468 -115 1757 136 58 0 chr10 28471478 28471772 -111844993 + L1PA16 LINE L1 5523 5833 -333 * 1884 43 0 9 chr10 28471767 28472000 -111844765 - L1PA4 LINE L1 -79 6076 5846 664 43 0 33 chr10 28472000 28472082 -111844683 + L1PA4 LINE L1 6067 6155 0 2163 115 68 0 chr10 28472090 28472412 -111844353 + L1PA16 LINE L1 5814 6157 -9 26 30 0 0 chr10 28472412 28472445 -111844320 + AT_rich Low_complexity Low_complexity 1 33 0 286 301 51 64 chr10 28472746 28472902 -111843863 - L2 LINE L2 -1 3271 3118 180 308 94 8 chr10 28473320 28473437 -111843328 - L2 LINE L2 -1276 2038 1912 353 116 0 128 chr10 28473523 28473609 -111843156 + L1PA8 LINE L1 6098 6172 0 21 57 0 0 chr10 28474522 28474557 -111842208 + AT_rich Low_complexity Low_complexity 1 35 0 3017 137 35 4 chr10 28474640 28475131 -111841634 + L1MA9 LINE L1 5802 6307 -5 1914 104 6 130 chr10 28475351 28475696 -111841069 + AluSq SINE Alu 1 302 -1 38 0 0 0 chr10 28475697 28475735 -111841030 + AT_rich Low_complexity Low_complexity 1 38 0 832 172 8 0 chr10 28476384 28476506 -111840259 + FLAM_C SINE Alu 2 124 -19 340 261 60 45 chr10 28476774 28476817 -111839948 - MIR3 SINE MIR -17 191 150 1755 137 9 70 chr10 28476817 28477145 -111839620 - AluJo SINE Alu -4 308 1 340 261 60 45 chr10 28477145 28477235 -111839530 - MIR3 SINE MIR -58 150 56 819 216 0 0 chr10 28477694 28477847 -111838918 + MLT1A1 LTR MaLR 1 153 -212 2498 65 7 0 chr10 28478241 28478548 -111838217 + AluY SINE Alu 1 309 -2 1342 203 29 14 chr10 28478730 28479011 -111837754 - AluJo SINE Alu -12 300 16 391 367 77 0 chr10 28479099 28479295 -111837470 + MIR SINE MIR 52 262 0 236 368 30 77 chr10 28479322 28479412 -111837353 + L2 LINE L2 2989 3082 -190 3042 91 66 5 chr10 28479412 28479839 -111836926 + MLT2A2 LTR ERVL 1 453 0 236 368 30 77 chr10 28479839 28479982 -111836783 + L2 LINE L2 3082 3211 -61 2130 123 0 3 chr10 28480457 28480767 -111835998 + AluSx SINE Alu 1 309 -3 1812 109 0 116 chr10 28480767 28481118 -111835647 + AluSx SINE Alu 1 315 0 197 105 0 26 chr10 28482085 28482123 -111834642 + (TA)n Simple_repeat Simple_repeat 1 37 0 695 208 0 0 chr10 28483348 28483473 -111833292 - FLAM_C SINE Alu -17 126 2 276 336 47 16 chr10 28483914 28484042 -111832723 + MIR SINE MIR 48 179 -83 691 208 0 0 chr10 28486215 28486340 -111830425 - AluJb SINE Alu -186 126 2 403 296 153 6 chr10 28486753 28486929 -111829836 + MIR SINE MIR 24 225 -37 693 224 0 0 chr10 28488781 28488906 -111827859 - FLAM_C SINE Alu -17 126 2 263 304 43 26 chr10 28489341 28489456 -111827309 + MIR SINE MIR 36 152 -56 181 196 54 36 chr10 28491226 28491282 -111825483 + MIR3 SINE MIR 116 172 -36 814 201 18 6 chr10 28493462 28493626 -111823139 - L1PB1 LINE L1 -2 6149 5984 1558 192 0 10 chr10 28493630 28493927 -111822838 - AluSx SINE Alu -18 294 1 2083 112 0 0 chr10 28494453 28494781 -111821984 - AluSc SINE Alu 0 328 1 1354 209 0 0 chr10 28495424 28495677 -111821088 + AluJo SINE Alu 53 305 -7 1859 155 3 0 chr10 28496817 28497107 -111819658 + AluJb SINE Alu 3 293 -19 2057 100 4 4 chr10 28497107 28497440 -111819325 + AluSg SINE Alu 1 333 0 655 123 75 0 chr10 28497604 28497710 -111819055 + AluJb SINE Alu 169 282 -30 28 61 0 0 chr10 28497712 28497761 -111819004 + AT_rich Low_complexity Low_complexity 1 49 0 2613 51 0 6 chr10 28498409 28498720 -111818045 - AluY SINE Alu -2 309 1 730 160 216 44 chr10 28499054 28499131 -111817634 - MER30 DNA MER1_type -17 213 151 1897 147 3 3 chr10 28499131 28499416 -111817349 + AluSx SINE Alu 5 289 -23 730 160 216 44 chr10 28499416 28499519 -111817246 - MER30 DNA MER1_type -79 151 2 1552 116 14 0 chr10 28499766 28499973 -111816792 - L1PA10 LINE L1 -11 6157 5948 576 129 0 21 chr10 28500060 28500153 -111816612 + MER65B LTR ERV1 1 91 -440 386 296 148 30 chr10 28500758 28501224 -111815541 - L1MEc LINE L1 -3478 2737 2217 1746 175 10 3 chr10 28501241 28501549 -111815216 - AluJo SINE Alu -2 310 1 204 40 0 0 chr10 28501839 28501864 -111814901 + (CA)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr10 28502026 28502067 -111814698 + (CA)n Simple_repeat Simple_repeat 2 42 0 502 281 123 38 chr10 28502072 28502655 -111814110 - L1MEc LINE L1 -4708 1688 1056 2739 167 27 2 chr10 28502659 28503138 -111813627 - L1MC1 LINE L1 0 6333 5843 1102 219 190 11 chr10 28503138 28503517 -111813248 - MSTB2 LTR MaLR -10 447 1 418 152 0 51 chr10 28503548 28503627 -111813138 - AluS SINE Alu -10 301 227 3917 202 29 37 chr10 28503627 28505220 -111811545 - L1MC1 LINE L1 -519 5825 4252 291 264 54 72 chr10 28505550 28505717 -111811048 + L1P LINE L1 3878 4041 -2105 1509 223 19 22 chr10 28505759 28506127 -111810638 - MER74A LTR ERVL -13 545 179 902 199 36 0 chr10 28506177 28506343 -111810422 - MER74A LTR ERVL -386 172 1 2071 181 67 0 chr10 28506715 28507119 -111809646 + Tigger6a DNA MER2_type 38 468 -615 229 180 140 20 chr10 28507110 28507160 -111809605 + Tigger6a DNA MER2_type 707 762 -321 * 2186 156 68 29 chr10 28507237 28507613 -111809152 - MSTB LTR MaLR 0 426 31 1832 140 76 36 chr10 28507613 28507970 -111808795 - THE1C LTR MaLR -4 371 1 2186 156 68 29 chr10 28507970 28508003 -111808762 - MSTB LTR MaLR -395 31 1 518 206 31 140 chr10 28508003 28508425 -111808340 + L1MC5 LINE L1 7377 7752 -209 317 255 14 55 chr10 28508496 28508641 -111808124 + L1MC5 LINE L1 7790 7928 -33 1803 129 0 14 chr10 28509238 28509518 -111807247 + AluSx SINE Alu 36 311 -1 375 327 18 6 chr10 28511089 28511257 -111805508 + MER117 DNA MER1_type 2 171 -26 289 251 0 135 chr10 28511448 28511541 -111805224 - L1ME3A LINE L1 -223 5947 5884 1655 158 32 7 chr10 28511541 28511820 -111804945 + AluJo SINE Alu 1 286 -26 289 251 0 135 chr10 28511820 28511889 -111804876 - L1ME3A LINE L1 -286 5884 5807 312 250 107 36 chr10 28511896 28512036 -111804729 + L1MEd LINE L1 561 710 -5409 24 32 0 0 chr10 28512245 28512276 -111804489 + AT_rich Low_complexity Low_complexity 1 31 0 1661 83 0 0 chr10 28513379 28513595 -111803170 + AluSq SINE Alu 5 220 -93 408 179 0 0 chr10 28513968 28514035 -111802730 - AluSq/x SINE Alu -191 122 56 1715 164 30 20 chr10 28514069 28514433 -111802332 + AluJo SINE Alu 1 367 0 2291 102 10 0 chr10 28514628 28514933 -111801832 + AluSx SINE Alu 1 308 -4 1940 152 0 7 chr10 28515420 28515710 -111801055 - AluSx SINE Alu -22 290 3 2041 120 7 7 chr10 28515722 28516021 -111800744 - AluSx SINE Alu -13 299 1 1389 101 0 0 chr10 28516363 28516542 -111800223 + AluSg SINE Alu 1 179 -131 264 243 15 36 chr10 28516718 28516825 -111799940 + Alu SINE Alu 233 280 -20 1170 118 6 0 chr10 28516994 28517155 -111799610 - AluSq SINE Alu -18 295 134 2553 45 0 19 chr10 28517155 28517469 -111799296 - AluYb8 SINE Alu -10 308 1 256 167 13 13 chr10 28517755 28517833 -111798932 + (TA)n Simple_repeat Simple_repeat 2 79 0 232 274 131 24 chr10 28517914 28517961 -111798804 - MIR SINE MIR -1 261 220 2322 89 0 0 chr10 28517961 28518252 -111798513 - AluSg SINE Alu -7 303 13 232 274 131 24 chr10 28518252 28518288 -111798477 - MIR SINE MIR -42 220 169 392 184 149 0 chr10 28518347 28518461 -111798304 + L1MB7 LINE L1 6045 6175 -9 1783 163 3 3 chr10 28519427 28519439 -111797326 - AluJo SINE Alu 0 312 301 184 42 0 0 chr10 28519439 28519463 -111797302 + (TTTG)n Simple_repeat Simple_repeat 1 172 0 1783 163 3 3 chr10 28519463 28519745 -111797020 - AluJo SINE Alu -10 302 1 1590 203 16 16 chr10 28519802 28520112 -111796653 + AluJb SINE Alu 1 310 -2 2216 100 0 0 chr10 28520286 28520576 -111796189 + AluSq SINE Alu 1 290 -23 345 243 103 44 chr10 28520605 28520741 -111796024 - MIR SINE MIR -115 147 4 1117 103 0 0 chr10 28520904 28521060 -111795705 + AluY SINE Alu 136 291 -20 1032 90 0 0 chr10 28521073 28521218 -111795547 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 1699 156 42 10 chr10 28521621 28521910 -111794855 + AluJb SINE Alu 1 298 -14 846 172 12 25 chr10 28521914 28522077 -111794688 + AluJo SINE Alu 1 161 -151 604 226 34 72 chr10 28522077 28522285 -111794480 + L2 LINE L2 3113 3312 -1 196 308 64 13 chr10 28522616 28522694 -111794071 - L2 LINE L2 -59 3254 3173 331 299 97 37 chr10 28523582 28524014 -111792751 + L1MEc LINE L1 2110 2567 -3579 2008 116 0 7 chr10 28524026 28524302 -111792463 + AluSx SINE Alu 24 297 -15 1662 182 0 11 chr10 28525009 28525327 -111791438 - AluJb SINE Alu 0 315 1 317 267 88 18 chr10 28525603 28525722 -111791043 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28525771 28525928 -111790837 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28526820 28526844 -111789921 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28526962 28527507 -111789258 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28527774 28528060 -111788705 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28528454 28529053 -111787712 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28529058 28529089 -111787676 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28529396 28529552 -111787213 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28529970 28530087 -111786678 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28531166 28531659 -111785106 + L1MA9 LINE L1 5802 6312 0 1955 114 0 57 chr10 28531872 28532225 -111784540 + AluY SINE Alu 1 311 0 1865 127 6 73 chr10 28532233 28532547 -111784218 + AluSq SINE Alu 1 293 -20 32 0 0 0 chr10 28532602 28532634 -111784131 + AT_rich Low_complexity Low_complexity 1 32 0 800 169 8 0 chr10 28533286 28533404 -111783361 + FLAM_C SINE Alu 2 120 -23 359 301 45 57 chr10 28533673 28533715 -111783050 - MIR3 SINE MIR -17 191 150 1696 158 3 47 chr10 28533715 28534072 -111782693 - AluJo SINE Alu 0 344 1 359 301 45 57 chr10 28534072 28534204 -111782561 - MIR3 SINE MIR -58 150 18 2148 184 17 0 chr10 28534622 28534981 -111781784 + MLT1A1 LTR MaLR 1 365 0 2307 96 51 61 chr10 28535054 28535309 -111781456 + L1PA11 LINE L1 5802 6058 -116 792 173 0 43 chr10 28535309 28535448 -111781317 + FLAM_C SINE Alu 1 133 0 1314 171 171 0 chr10 28535454 28535725 -111781040 + AluSx SINE Alu 3 314 0 2307 96 51 61 chr10 28535725 28535836 -111780929 + L1PA11 LINE L1 6063 6172 -2 249 122 20 0 chr10 28535992 28536041 -111780724 - MIR SINE MIR -49 213 164 1551 175 43 0 chr10 28536406 28536686 -111780079 - AluJb SINE Alu -20 292 1 832 191 0 19 chr10 28537197 28537354 -111779411 - AluJb SINE Alu -2 310 157 23 0 0 0 chr10 28537433 28537456 -111779309 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr10 28537835 28537878 -111778887 + AT_rich Low_complexity Low_complexity 1 43 0 423 0 0 0 chr10 28538317 28538364 -111778401 + (TA)n Simple_repeat Simple_repeat 2 48 0 2137 112 3 0 chr10 28538366 28538653 -111778112 - AluSq SINE Alu -25 288 1 372 280 212 15 chr10 28539161 28539425 -111777340 + L1M4 LINE L1 4519 4834 -1312 1516 184 10 33 chr10 28540364 28540669 -111776096 - AluJo SINE Alu -14 298 1 2142 123 7 3 chr10 28541129 28541429 -111775336 - AluSx SINE Alu -7 305 5 315 276 128 100 chr10 28542756 28543234 -111773531 - L1M2 LINE L1 -5701 1148 658 1797 158 0 35 chr10 28544113 28544424 -111772341 + AluJo SINE Alu 1 300 -12 2257 109 0 6 chr10 28544657 28544969 -111771796 - AluSx SINE Alu -2 310 1 499 141 40 20 chr10 28545437 28545536 -111771229 - FLAM_C SINE Alu -3 140 40 805 126 0 0 chr10 28545595 28545706 -111771059 + FLAM_C SINE Alu 1 111 -32 1853 123 33 74 chr10 28545707 28546098 -111770667 + THE1C LTR MaLR 1 375 0 9663 112 66 8 chr10 28546101 28547592 -111769173 + THE1C-int LTR MaLR 4 1580 0 1899 143 66 39 chr10 28547593 28547957 -111768808 + THE1C LTR MaLR 2 375 0 884 153 0 0 chr10 28547967 28548098 -111768667 + FRAM SINE Alu 1 123 -53 283 295 21 0 chr10 28548311 28548406 -111768359 - MIR SINE MIR -16 246 150 183 283 57 19 chr10 28548432 28548485 -111768280 - MIR SINE MIR -197 65 11 398 185 0 0 chr10 28548633 28548698 -111768067 + AluJ/FLAM SINE Alu 1 65 -237 2615 48 0 3 chr10 28549054 28549365 -111767400 + AluY SINE Alu 2 311 0 376 245 43 29 chr10 28549386 28549525 -111767240 - L1ME4a LINE L1 -17 6104 5964 29 21 0 21 chr10 28550056 28550083 -111766682 + AT_rich Low_complexity Low_complexity 1 28 -18 701 153 48 16 chr10 28550083 28550207 -111766558 - FLAM_C SINE Alu -5 128 1 29 21 0 21 chr10 28550207 28550226 -111766539 + AT_rich Low_complexity Low_complexity 28 46 0 30 27 0 0 chr10 28550721 28550758 -111766007 + AT_rich Low_complexity Low_complexity 1 37 0 1930 132 0 0 chr10 28550761 28551026 -111765739 - AluSx SINE Alu -24 288 24 834 189 0 38 chr10 28551401 28551560 -111765205 + FRAM SINE Alu 4 156 -20 322 152 0 0 chr10 28551562 28551608 -111765157 + Alu SINE Alu 1 46 -255 4063 142 29 4 chr10 28552076 28552772 -111763993 - MER50 LTR ERV1 -20 714 2 342 252 139 9 chr10 28553379 28553494 -111763271 + L2 LINE L2 3141 3270 -2 652 134 0 45 chr10 28554015 28554127 -111762638 + FRAM SINE Alu 69 175 -1 2337 94 0 3 chr10 28554551 28554850 -111761915 + AluSq SINE Alu 1 298 -15 2250 105 3 10 chr10 28555144 28555450 -111761315 + AluSg SINE Alu 1 304 -6 837 235 199 35 chr10 28555901 28556267 -111760498 + LTR16A LTR ERVL 25 450 0 2173 110 27 3 chr10 28556327 28556628 -111760137 + AluSx SINE Alu 1 308 -4 2194 104 28 0 chr10 28557541 28557829 -111758936 - AluSx SINE Alu -14 298 3 21 0 0 56 chr10 28558528 28558548 -111758217 + AT_rich Low_complexity Low_complexity 1 20 -14 1979 135 17 0 chr10 28558548 28558837 -111757928 + AluSx SINE Alu 1 294 -18 21 0 0 56 chr10 28558837 28558852 -111757913 + AT_rich Low_complexity Low_complexity 20 34 0 2158 123 0 3 chr10 28559355 28559665 -111757100 - AluSx SINE Alu -2 310 2 2004 128 17 0 chr10 28560176 28560464 -111756301 - AluSx SINE Alu -6 306 14 2362 109 0 0 chr10 28560613 28560916 -111755849 + AluSq SINE Alu 1 303 -10 2061 121 17 3 chr10 28561625 28561914 -111754851 + AluSx SINE Alu 2 294 -18 21 0 0 0 chr10 28562660 28562681 -111754084 + AT_rich Low_complexity Low_complexity 1 21 0 2097 110 31 7 chr10 28563160 28563450 -111753315 + AluSx SINE Alu 1 297 -15 366 23 0 0 chr10 28563561 28563604 -111753161 + (CA)n Simple_repeat Simple_repeat 2 44 0 2058 138 3 0 chr10 28564572 28564870 -111751895 + AluSx SINE Alu 1 299 -13 317 305 105 24 chr10 28565322 28565532 -111751233 - L2 LINE L2 -189 3083 2857 216 349 12 0 chr10 28565529 28565615 -111751150 + MIR3 SINE MIR 98 184 -24 * 1943 161 0 16 chr10 28566710 28567027 -111749738 - AluSx SINE Alu 0 312 1 804 164 0 16 chr10 28567944 28568072 -111748693 + FLAM_C SINE Alu 2 127 -16 2212 103 7 0 chr10 28568929 28569220 -111747545 + AluSx SINE Alu 1 293 -19 220 309 24 12 chr10 28569364 28569448 -111747317 - MIR SINE MIR -79 129 45 1260 96 0 12 chr10 28569633 28569800 -111746965 - AluSg/x SINE Alu -4 306 142 1486 208 68 25 chr10 28569826 28570220 -111746545 - L1MC4 LINE L1 -283 7759 7349 1081 98 0 0 chr10 28570221 28570354 -111746411 + AluSq/x SINE Alu 1 133 -179 2198 107 7 0 chr10 28570357 28570648 -111746117 + AluSq SINE Alu 1 293 -20 311 193 176 0 chr10 28570653 28570802 -111745963 - L1MC4 LINE L1 -690 7352 7108 2112 124 3 7 chr10 28571212 28571519 -111745246 - AluSx SINE Alu -6 306 1 1942 197 150 110 chr10 28571522 28572202 -111744563 - L1MC4a LINE L1 -848 6960 6309 845 71 94 0 chr10 28572202 28572329 -111744436 - MER85 DNA T2_type 0 139 1 1942 197 150 110 chr10 28572329 28572344 -111744421 - L1MC4a LINE L1 -1499 6309 6296 2619 46 0 0 chr10 28572344 28572648 -111744117 - AluY SINE Alu -7 304 1 1942 197 150 110 chr10 28572648 28572764 -111744001 - L1MC4a LINE L1 -1512 6296 6186 2058 139 7 3 chr10 28572764 28573074 -111743691 + AluJb SINE Alu 1 311 -1 1942 197 150 110 chr10 28573074 28573361 -111743404 - L1MC4a LINE L1 -1622 6186 5816 976 53 0 0 chr10 28573383 28573496 -111743269 + AluSg SINE Alu 21 133 -177 2092 122 3 0 chr10 28573496 28573784 -111742981 + AluSx SINE Alu 1 289 -23 34 0 0 0 chr10 28573784 28573818 -111742947 + AT_rich Low_complexity Low_complexity 1 34 0 1179 269 92 9 chr10 28573822 28574246 -111742519 - L1MC4a LINE L1 -2001 5807 5349 1136 78 0 0 chr10 28574250 28574392 -111742373 - AluSg/x SINE Alu -34 278 137 327 291 78 8 chr10 28574963 28575152 -111741613 + MIR SINE MIR 13 261 -1 1858 81 135 0 chr10 28575275 28575534 -111741231 + AluSx SINE Alu 1 294 -18 1872 157 7 3 chr10 28576129 28576416 -111740349 + AluJo SINE Alu 1 288 -24 489 269 126 9 chr10 28576421 28576644 -111740121 - MIR SINE MIR 0 262 14 296 263 60 45 chr10 28578135 28578268 -111738497 + MIR SINE MIR 58 192 -70 2297 75 31 3 chr10 28579895 28580188 -111736577 + AluSg SINE Alu 9 309 -1 344 298 163 0 chr10 28580681 28580859 -111735906 - MIR SINE MIR -55 207 1 1715 135 53 18 chr10 28582156 28582291 -111734474 + AluJo SINE Alu 1 130 -182 2217 89 10 35 chr10 28582291 28582604 -111734161 + AluY SINE Alu 1 305 -6 1715 135 53 18 chr10 28582604 28582749 -111734016 + AluJo SINE Alu 130 291 -21 539 232 11 89 chr10 28583496 28583639 -111733126 + MER5B DNA MER1_type 4 130 -48 2050 117 6 31 chr10 28583639 28583956 -111732809 + AluSx SINE Alu 1 309 -3 539 232 11 89 chr10 28583956 28584002 -111732763 + MER5B DNA MER1_type 130 178 0 360 229 153 59 chr10 28584138 28584308 -111732457 + MER5A DNA MER1_type 1 186 -3 2292 93 3 7 chr10 28584313 28584613 -111732152 - AluSx SINE Alu -13 299 1 290 333 0 10 chr10 28585215 28585311 -111731454 - MER5B DNA MER1_type -83 95 1 324 290 115 40 chr10 28586212 28586797 -111729968 + HAL1 LINE L1 773 1312 -1195 268 22 44 22 chr10 28586797 28586842 -111729923 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 2141 72 7 4 chr10 28586846 28587123 -111729642 - AluSc SINE Alu -31 278 1 324 290 115 40 chr10 28587123 28587201 -111729564 + HAL1 LINE L1 1314 1748 -759 1679 182 0 11 chr10 28587359 28587685 -111729080 - AluJb SINE Alu 0 323 1 327 267 88 18 chr10 28587961 28588080 -111728685 - MIR SINE MIR -61 147 21 892 204 0 0 chr10 28588129 28588286 -111728479 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28589178 28589202 -111727563 + AT_rich Low_complexity Low_complexity 1 24 0 2683 167 37 28 chr10 28589319 28589864 -111726901 - MER44D DNA MER2_type 0 605 1 244 318 269 7 chr10 28590131 28590417 -111726348 + L3b LINE CR1 1112 1472 -111 3557 128 46 0 chr10 28590823 28591410 -111725355 + L1PA16 LINE L1 5541 6154 -12 204 97 0 0 chr10 28591415 28591446 -111725319 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 274 320 51 64 chr10 28591753 28591909 -111724856 - L2 LINE L2 -1 3271 3118 186 274 120 34 chr10 28592327 28592444 -111724321 - L2 LINE L2 -1276 2038 1912 2741 144 41 4 chr10 28593523 28594016 -111722749 + L1MA9 LINE L1 5802 6312 0 2191 83 0 62 chr10 28594229 28594554 -111722211 + AluY SINE Alu 1 305 -6 244 204 86 54 chr10 28594828 28594921 -111721844 + HAL1 LINE L1 2218 2313 -194 2379 104 3 0 chr10 28594928 28595236 -111721529 + AluSx SINE Alu 1 309 -3 1875 132 58 23 chr10 28598688 28599036 -111717729 - MER46B DNA MER2_type 0 236 2 960 224 15 5 chr10 28599093 28599298 -111717467 + MER58A DNA MER1_type 17 223 -1 2153 109 7 0 chr10 28599587 28599881 -111716884 + AluSx SINE Alu 14 309 -3 413 153 0 59 chr10 28600356 28600441 -111716324 - Tigger5 DNA MER2_type -2 2321 2242 300 269 13 0 chr10 28600431 28600509 -111716256 + Tigger5 DNA MER2_type 2242 2320 -3 * 436 179 0 13 chr10 28600509 28600586 -111716179 - Tigger5 DNA MER2_type -2245 78 3 187 344 0 0 chr10 28603142 28603206 -111713559 - MIR SINE MIR -125 137 74 208 245 0 19 chr10 28603490 28603543 -111713222 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1039 169 17 6 chr10 28603548 28603725 -111713040 - AluJo SINE Alu -50 262 84 203 57 86 0 chr10 28605221 28605256 -111711509 + A-rich Low_complexity Low_complexity 3 40 0 24 85 0 0 chr10 28605557 28605616 -111711149 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 28606565 28606586 -111710179 + (CTA)n Simple_repeat Simple_repeat 3 23 0 2313 93 0 3 chr10 28607155 28607455 -111709310 + AluSq SINE Alu 10 308 -5 23 0 0 0 chr10 28609440 28609463 -111707302 + AT_rich Low_complexity Low_complexity 1 23 0 2303 110 3 0 chr10 28609969 28610278 -111706487 + AluSx SINE Alu 1 310 -2 1815 145 23 10 chr10 28610295 28610599 -111706166 - AluJo SINE Alu -4 308 1 23 0 0 0 chr10 28610836 28610859 -111705906 + AT_rich Low_complexity Low_complexity 1 23 0 438 108 0 0 chr10 28610979 28611044 -111705721 + (TA)n Simple_repeat Simple_repeat 1 65 0 362 263 112 13 chr10 28611065 28611297 -111705468 - L1ME3A LINE L1 -223 5947 5693 533 174 47 160 chr10 28611324 28611376 -111705389 - MER5A DNA MER1_type 0 189 133 1900 148 3 7 chr10 28611376 28611667 -111705098 - AluJo SINE Alu -22 290 1 533 174 47 160 chr10 28611667 28611827 -111704938 - MER5A DNA MER1_type -56 133 1 501 203 117 0 chr10 28611835 28611963 -111704802 - Charlie1 DNA MER1_type 0 2761 2619 * 845 252 78 0 chr10 28611956 28612162 -111704603 - Charlie1 DNA MER1_type -2534 227 6 601 293 30 26 chr10 28612167 28612437 -111704328 - L1ME3A LINE L1 -508 5656 5386 21 0 0 0 chr10 28612662 28612683 -111704082 + AT_rich Low_complexity Low_complexity 1 21 0 2152 132 9 12 chr10 28613965 28614307 -111702458 - MER2 DNA MER2_type 0 344 4 748 264 0 6 chr10 28614779 28614946 -111701819 + MER8 DNA MER2_type 2 167 -72 458 138 0 11 chr10 28614976 28615063 -111701702 + (GGGA)n Simple_repeat Simple_repeat 3 88 0 1825 159 33 12 chr10 28616077 28616410 -111700355 + MER58B DNA MER1_type 2 341 0 564 201 87 14 chr10 28616892 28617056 -111699709 + L1ME3A LINE L1 5983 6152 -18 25 21 0 43 chr10 28617103 28617124 -111699641 + AT_rich Low_complexity Low_complexity 1 21 -24 2183 104 3 0 chr10 28617124 28617411 -111699354 + AluSx SINE Alu 1 288 -24 25 21 0 43 chr10 28617411 28617436 -111699329 + AT_rich Low_complexity Low_complexity 21 45 0 2176 95 27 0 chr10 28617623 28617917 -111698848 + AluSp SINE Alu 1 302 -11 21 0 0 0 chr10 28619330 28619351 -111697414 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 28622073 28622096 -111694669 + AT_rich Low_complexity Low_complexity 1 23 0 1499 145 87 40 chr10 28622149 28622425 -111694340 + AluJb SINE Alu 1 289 -23 2002 118 38 0 chr10 28622572 28622859 -111693906 - AluSx SINE Alu -14 298 1 27 0 0 0 chr10 28622904 28622931 -111693834 + AT_rich Low_complexity Low_complexity 1 27 0 704 168 172 13 chr10 28623004 28623285 -111693480 + MER93b LTR ERV1 20 371 -2 1233 187 74 21 chr10 28623365 28623691 -111693074 + MER2 DNA MER2_type 1 343 -1 334 252 115 81 chr10 28624048 28624370 -111692395 + L1M4 LINE L1 5002 5334 -812 516 116 63 0 chr10 28624746 28624841 -111691924 + L1MB3 LINE L1 6082 6182 -1 268 284 27 0 chr10 28625207 28625281 -111691484 + (TATG)n Simple_repeat Simple_repeat 2 77 0 1839 155 21 0 chr10 28626857 28627141 -111689624 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr10 28627574 28627595 -111689170 + AT_rich Low_complexity Low_complexity 1 21 0 349 298 66 16 chr10 28627705 28627826 -111688939 - L2 LINE L2 -587 2727 2601 1465 254 95 4 chr10 28628014 28628479 -111688286 + LTR40a LTR ERVL 8 514 -5 1245 244 48 96 chr10 28628485 28629593 -111687172 + HERVL40 LTR ERVL 1 1023 -4507 1367 156 0 30 chr10 28629604 28629835 -111686930 - AluJo SINE Alu -29 283 60 1449 289 52 12 chr10 28629838 28630412 -111686353 + HERVL40 LTR ERVL 1018 1614 -3916 4550 239 60 5 chr10 28630412 28631715 -111685050 + HERVL40 LTR ERVL 2526 3978 -1552 3656 146 103 27 chr10 28631717 28631803 -111684962 + L1MB2 LINE L1 5287 5365 -806 2336 92 0 0 chr10 28631803 28632098 -111684667 + AluSc SINE Alu 1 295 -14 3656 146 103 27 chr10 28632098 28632833 -111683932 + L1MB2 LINE L1 5365 6171 0 2046 218 148 39 chr10 28632843 28633466 -111683299 + HERVL40 LTR ERVL 3970 4660 -870 260 254 39 77 chr10 28633712 28633893 -111682872 + HERVL40 LTR ERVL 2456 2629 -408 401 356 36 0 chr10 28634068 28634377 -111682388 + MER89-int LTR ERV1 6179 6498 -303 * 1160 231 53 12 chr10 28634254 28634597 -111682168 + HERVL40 LTR ERVL 2780 5529 -1 1416 217 54 95 chr10 28634598 28634800 -111681965 + LTR40a LTR ERVL 1 210 -309 2125 123 0 10 chr10 28634800 28635101 -111681664 + AluSx SINE Alu 1 298 -14 1416 217 54 95 chr10 28635101 28635437 -111681328 + LTR40a LTR ERVL 210 517 -2 2016 110 7 20 chr10 28635581 28635880 -111680885 - AluSx SINE Alu -17 295 1 585 327 201 5 chr10 28636144 28636587 -111680178 + L2 LINE L2 2176 2705 -609 2357 118 6 8 chr10 28637345 28637701 -111679064 + THE1A LTR MaLR 1 355 0 2635 46 0 3 chr10 28637992 28638298 -111678467 + AluY SINE Alu 1 305 -6 6229 64 26 16 chr10 28638985 28639890 -111676875 - L1PA12 LINE L1 0 6168 5254 783 112 0 0 chr10 28639901 28640008 -111676757 - U6 snRNA snRNA 0 107 1 1932 167 7 7 chr10 28640148 28640453 -111676312 + AluJb SINE Alu 1 305 -7 428 285 122 15 chr10 28640809 28641212 -111675553 + L1ME3A LINE L1 4551 4996 -1150 392 233 26 78 chr10 28641229 28641422 -111675343 + L1ME3A LINE L1 5769 5951 -219 984 153 45 116 chr10 28643254 28643322 -111673443 + AluJb SINE Alu 85 156 -156 1982 136 36 3 chr10 28643322 28643624 -111673141 + AluSx SINE Alu 1 312 0 984 153 45 116 chr10 28643624 28643797 -111672968 + AluJb SINE Alu 156 309 -3 615 272 11 69 chr10 28643816 28644092 -111672673 + MIR SINE MIR 3 262 0 2257 106 7 0 chr10 28644223 28644525 -111672240 + AluSx SINE Alu 1 304 -8 492 229 29 29 chr10 28644527 28644702 -111672063 + HAL1 LINE L1 1383 1557 -950 2708 154 27 19 chr10 28644726 28645309 -111671456 + L1 LINE L1 4107 4694 -1452 300 120 0 0 chr10 28645311 28645361 -111671404 + AluSc SINE Alu 246 295 -4 586 177 0 0 chr10 28645370 28645466 -111671299 + AluJb SINE Alu 203 298 -14 873 229 46 57 chr10 28645470 28645632 -111671133 + L1MA9 LINE L1 5943 6105 -207 2001 136 31 43 chr10 28645632 28645984 -111670781 + MER7A DNA MER2_type 1 346 0 873 229 46 57 chr10 28645984 28646116 -111670649 + L1MA9 LINE L1 6105 6235 -77 1980 130 56 15 chr10 28646116 28646440 -111670325 - MER1B DNA MER1_type 0 337 1 873 229 46 57 chr10 28646440 28646493 -111670272 + L1MA9 LINE L1 6235 6287 -25 668 220 65 18 chr10 28646529 28646697 -111670068 + MIR SINE MIR 1 176 -86 607 288 33 33 chr10 28647305 28647604 -111669161 + L1MEd LINE L1 103 401 -5804 1775 188 45 19 chr10 28647604 28648024 -111668741 + MLT1D LTR MaLR 71 501 -4 248 242 78 16 chr10 28648196 28648324 -111668441 + L1MEd LINE L1 738 873 -5332 * 270 201 79 50 chr10 28648322 28648461 -111668304 + L1MEd LINE L1 2146 2288 -4108 23 33 0 0 chr10 28648616 28648646 -111668119 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr10 28649366 28649387 -111667378 + (A)n Simple_repeat Simple_repeat 1 21 0 2201 104 0 3 chr10 28649463 28649762 -111667003 + AluSx SINE Alu 1 298 -14 407 206 0 0 chr10 28649764 28649856 -111666909 + L1MC4a LINE L1 7402 7493 -315 769 170 7 0 chr10 28649856 28649991 -111666774 + FLAM_C SINE Alu 1 136 -7 576 214 0 0 chr10 28649991 28650103 -111666662 + AluJb SINE Alu 183 294 -18 1926 90 93 0 chr10 28650109 28650377 -111666388 + AluSp SINE Alu 1 293 -20 852 234 97 50 chr10 28650380 28650626 -111666139 + L1MC4 LINE L1 7567 7833 -209 1986 157 3 0 chr10 28650626 28650931 -111665834 + AluJb SINE Alu 1 306 -6 852 234 97 50 chr10 28650931 28651004 -111665761 + L1MC4 LINE L1 7833 7901 -141 311 303 148 48 chr10 28652013 28652350 -111664415 - LTR33 LTR ERVL -143 378 8 249 326 135 35 chr10 28652401 28652631 -111664134 - L2 LINE L2 -211 3061 2809 370 304 0 51 chr10 28653146 28653284 -111663481 - L2 LINE L2 -24 3289 3159 23 33 0 0 chr10 28653356 28653386 -111663379 + AT_rich Low_complexity Low_complexity 1 30 0 2153 141 0 0 chr10 28653461 28653759 -111663006 + AluSx SINE Alu 1 298 -14 266 299 201 7 chr10 28654007 28654161 -111662604 - MIR SINE MIR -49 213 30 25 0 0 0 chr10 28654772 28654797 -111661968 + AT_rich Low_complexity Low_complexity 1 25 0 358 263 119 31 chr10 28656317 28656477 -111660288 - L1ME LINE L1 -5341 729 556 1888 139 0 30 chr10 28656552 28656853 -111659912 + AluJb SINE Alu 1 292 -20 895 249 120 59 chr10 28656863 28657170 -111659595 - L1ME LINE L1 -5540 530 180 2167 109 14 0 chr10 28657170 28657464 -111659301 + AluSx SINE Alu 1 298 -14 895 249 120 59 chr10 28657464 28657646 -111659119 - L1ME LINE L1 -5890 180 11 2015 106 0 4 chr10 28657828 28658101 -111658664 + AluSx SINE Alu 29 300 -12 2469 64 3 0 chr10 28658348 28658645 -111658120 + AluSx SINE Alu 1 298 -14 1570 193 3 3 chr10 28658660 28658945 -111657820 + AluJo SINE Alu 25 309 -3 955 234 79 69 chr10 28659119 28659575 -111657190 + MER21B LTR ERV1 295 739 -6 1023 221 9 18 chr10 28659863 28660089 -111656676 - MER58A DNA MER1_type 0 224 1 21 0 0 0 chr10 28660173 28660194 -111656571 + AT_rich Low_complexity Low_complexity 1 21 0 346 266 43 0 chr10 28660246 28660340 -111656425 + GA-rich Low_complexity Low_complexity 3 100 0 21 89 0 0 chr10 28660381 28660437 -111656328 + AT_rich Low_complexity Low_complexity 1 56 0 1059 218 123 35 chr10 28661224 28661624 -111655141 - MLT1D LTR MaLR -59 446 12 964 162 26 24 chr10 28661932 28662283 -111654482 - MLT1B LTR MaLR 0 390 3 2139 123 0 20 chr10 28662327 28662628 -111654137 + AluSx SINE Alu 1 295 -17 1359 171 81 8 chr10 28662961 28663346 -111653419 + Charlie1 DNA MER1_type 2343 2755 -6 438 333 36 31 chr10 28663571 28663766 -111652999 + MIR3 SINE MIR 3 198 -10 4217 197 46 34 chr10 28664889 28664989 -111651776 + Tigger6a DNA MER2_type 2 99 -1498 1682 187 3 14 chr10 28664989 28665278 -111651487 + AluJo SINE Alu 4 289 -23 4217 197 46 34 chr10 28665278 28666245 -111650520 + Tigger6a DNA MER2_type 99 1082 -1 306 0 0 0 chr10 28666347 28666381 -111650384 + (TG)n Simple_repeat Simple_repeat 1 34 0 1967 121 22 0 chr10 28666381 28666654 -111650111 - AluSx SINE Alu -33 279 1 260 245 0 0 chr10 28666837 28666890 -111649875 + AluSp SINE Alu 123 175 -128 907 157 30 45 chr10 28666891 28667089 -111649676 + L1MB3 LINE L1 5981 6175 -8 2074 111 0 10 chr10 28667234 28667522 -111649243 + AluSx SINE Alu 1 285 -27 377 263 32 70 chr10 28667604 28667695 -111649070 + L1MEc LINE L1 1787 1880 -4516 1947 115 29 70 chr10 28667695 28668008 -111648757 + AluSx SINE Alu 1 300 -12 377 263 32 70 chr10 28668008 28668061 -111648704 + L1MEc LINE L1 1880 1933 -4463 2102 110 0 36 chr10 28668061 28668369 -111648396 + AluSg1 SINE Alu 1 297 -12 377 263 32 70 chr10 28668369 28668539 -111648226 + L1MEc LINE L1 1933 2090 -4306 1703 232 29 64 chr10 28668625 28669077 -111647688 + L1MEc LINE L1 2384 2804 -3411 3315 124 19 55 chr10 28669077 28669700 -111647065 + L1MA9 LINE L1 5706 6306 -6 1703 232 29 64 chr10 28669700 28669946 -111646819 + L1MEc LINE L1 2804 3057 -3158 2275 84 10 14 chr10 28669947 28670244 -111646521 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28670690 28670713 -111646052 + AT_rich Low_complexity Low_complexity 1 23 0 2318 90 3 32 chr10 28670887 28671198 -111645567 - AluSp SINE Alu -11 302 1 1930 184 3 7 chr10 28671313 28671623 -111645142 - AluJb SINE Alu -3 309 1 1846 151 3 10 chr10 28671680 28671962 -111644803 + AluJb SINE Alu 1 282 -30 198 33 33 0 chr10 28671962 28671992 -111644773 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 342 220 110 0 chr10 28672961 28673079 -111643686 - L1MB7 LINE L1 -9 6175 6045 212 319 163 28 chr10 28673080 28673174 -111643591 + MIR SINE MIR 102 223 -39 2167 104 0 0 chr10 28673174 28673461 -111643304 + AluSg SINE Alu 13 299 -11 212 319 163 28 chr10 28673461 28673507 -111643258 + MIR SINE MIR 223 261 -1 196 135 19 19 chr10 28673599 28673651 -111643114 + (TA)n Simple_repeat Simple_repeat 1 52 0 2228 96 3 0 chr10 28673688 28673991 -111642774 - AluY SINE Alu -7 304 1 2525 69 0 0 chr10 28674264 28674570 -111642195 + AluSq SINE Alu 1 306 -7 2073 140 0 3 chr10 28674694 28675001 -111641764 - AluSg SINE Alu 0 310 5 2124 129 0 0 chr10 28675355 28675650 -111641115 + AluSx SINE Alu 5 299 -13 1863 168 0 10 chr10 28675660 28675951 -111640814 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28675951 28675972 -111640793 + AT_rich Low_complexity Low_complexity 1 21 0 745 138 16 0 chr10 28676196 28676319 -111640446 + FLAM_C SINE Alu 1 125 -8 1662 196 66 0 chr10 28676319 28676712 -111640053 - Tigger6a DNA MER2_type -625 458 40 886 176 74 0 chr10 28677097 28677273 -111639492 + MER74A LTR ERVL 1 189 -369 1217 236 20 10 chr10 28677312 28677685 -111639080 + MER74A LTR ERVL 179 611 -11 378 274 59 87 chr10 28677702 28677921 -111638844 - L1M4 LINE L1 -2090 4056 3844 3671 210 38 10 chr10 28678288 28679792 -111636973 + L1MC1 LINE L1 4284 5825 -519 419 157 0 36 chr10 28679792 28679875 -111636890 + AluS SINE Alu 225 304 -5 335 171 0 61 chr10 28679906 28679988 -111636777 + MSTB2 LTR MaLR 1 77 -351 828 220 34 34 chr10 28680008 28680272 -111636493 + MSTB2 LTR MaLR 184 447 -10 2253 180 31 4 chr10 28680272 28680750 -111636015 + L1MC1 LINE L1 5843 6333 0 405 294 107 18 chr10 28680753 28681313 -111635452 + L1MEc LINE L1 955 1582 -4728 369 0 0 0 chr10 28681342 28681383 -111635382 + (TG)n Simple_repeat Simple_repeat 2 42 0 1937 146 10 10 chr10 28681673 28681982 -111634783 + AluJo SINE Alu 1 309 -3 657 310 139 24 chr10 28681982 28682450 -111634315 + L1MEc LINE L1 2135 2656 -3473 589 97 0 21 chr10 28683049 28683142 -111633623 - MER65B LTR ERV1 -440 91 1 1377 126 18 22 chr10 28683229 28683451 -111633314 + L1PA10 LINE L1 5948 6168 0 626 166 221 44 chr10 28683676 28683779 -111632986 + MER30 DNA MER1_type 1 84 -146 1911 147 3 3 chr10 28683779 28684064 -111632701 - AluSx SINE Alu -23 289 5 626 166 221 44 chr10 28684064 28684141 -111632624 + MER30 DNA MER1_type 84 213 -17 26 64 0 0 chr10 28685110 28685157 -111631608 + AT_rich Low_complexity Low_complexity 1 47 0 770 106 9 0 chr10 28685158 28685271 -111631494 - AluJb SINE Alu -30 282 169 2208 93 0 0 chr10 28685435 28685744 -111631021 - AluSg SINE Alu 0 309 1 1654 166 35 0 chr10 28685744 28686032 -111630733 - AluJb SINE Alu -11 301 3 229 185 123 25 chr10 28687112 28687193 -111629572 + L1MC4 LINE L1 6959 7047 -995 1981 138 3 7 chr10 28687194 28687499 -111629266 + AluSx SINE Alu 1 304 -8 257 183 122 0 chr10 28687637 28687768 -111628997 + L1MC4 LINE L1 7137 7352 -690 2046 131 7 0 chr10 28687773 28688064 -111628701 - AluSq SINE Alu -20 293 1 1102 98 0 0 chr10 28688064 28688197 -111628568 - AluSg1 SINE Alu -176 133 1 257 213 17 148 chr10 28688199 28688429 -111628336 - L1MC5 LINE L1 -380 7581 7382 853 126 132 33 chr10 28688438 28688471 -111628294 + MSTB LTR MaLR 1 29 -397 1725 145 66 38 chr10 28688471 28688836 -111627929 + THE1C LTR MaLR 1 375 0 853 126 132 33 chr10 28688836 28688984 -111627781 + MSTB LTR MaLR 29 200 -226 5616 42 1 0 chr10 28688984 28690148 -111626617 - L1PA5 LINE L1 -202 5952 4788 1424 72 0 0 chr10 28690148 28690328 -111626437 + L1PA5 LINE L1 5966 6146 -8 533 15 15 0 chr10 28690328 28690394 -111626371 + (TA)n Simple_repeat Simple_repeat 2 68 0 1766 171 0 3 chr10 28691430 28691722 -111625043 + AluJb SINE Alu 1 291 -21 213 366 143 17 chr10 28692015 28692190 -111624575 - L2 LINE L2 -4 3268 3072 * 217 306 53 77 chr10 28692158 28692481 -111624284 - L2 LINE L2 -1428 1886 1572 499 174 33 16 chr10 28692746 28692867 -111623898 + MSTA LTR MaLR 185 307 -121 3262 208 46 28 chr10 28693030 28694574 -111622191 + L1MC2 LINE L1 4252 5824 -520 1588 206 10 0 chr10 28694574 28694870 -111621895 + AluSx SINE Alu 1 299 -13 3262 208 46 28 chr10 28694870 28694895 -111621870 + L1MC2 LINE L1 5824 5847 -497 497 151 157 60 chr10 28694906 28695072 -111621693 + MSTC LTR MaLR 1 182 -246 228 143 20 0 chr10 28695776 28695825 -111620940 + MIR SINE MIR 164 213 -49 215 172 125 62 chr10 28695956 28695981 -111620784 + MIR SINE MIR 85 107 -101 5659 107 8 3 chr10 28695981 28696092 -111620673 - L1PA11 LINE L1 -2 6172 6063 215 77 0 26 chr10 28696092 28696131 -111620634 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1899 126 0 34 chr10 28696131 28696424 -111620341 - AluSx SINE Alu -29 283 1 5659 107 8 3 chr10 28696424 28697438 -111619327 - L1PA11 LINE L1 -110 6064 5037 215 172 125 62 chr10 28697438 28697476 -111619289 + MIR SINE MIR 107 152 -56 236 333 105 43 chr10 28697612 28697822 -111618943 + L2 LINE L2 2811 3033 -239 1834 166 3 10 chr10 28698248 28698550 -111618215 + AluJb SINE Alu 1 300 -12 253 246 0 0 chr10 28698794 28698859 -111617906 + AluJ/FLAM SINE Alu 1 65 -237 1749 144 7 18 chr10 28698859 28699137 -111617628 + AluJo SINE Alu 36 310 -2 24 0 0 0 chr10 28699258 28699282 -111617483 + AT_rich Low_complexity Low_complexity 1 24 0 2494 86 0 0 chr10 28699514 28699817 -111616948 - AluSx SINE Alu -9 303 1 3806 193 37 19 chr10 28699988 28701285 -111615480 + Charlie1a DNA MER1_type 14 1389 -66 2371 113 0 0 chr10 28701286 28701596 -111615169 + AluSg SINE Alu 1 310 0 555 324 221 25 chr10 28701626 28702105 -111614660 - L2 LINE L2 -923 2391 2007 1634 146 54 37 chr10 28702105 28702399 -111614366 - AluJo SINE Alu -13 299 1 555 324 221 25 chr10 28702399 28702920 -111613845 - L2 LINE L2 -1307 2007 1195 544 157 17 17 chr10 28702940 28703055 -111613710 + FLAM_A SINE Alu 20 134 -8 2287 107 3 0 chr10 28703106 28703405 -111613360 + AluSp SINE Alu 1 300 -13 1955 154 0 7 chr10 28703810 28704109 -111612656 + AluSx SINE Alu 1 297 -15 379 245 52 43 chr10 28704113 28704365 -111612400 + L1 LINE L1 3084 3332 -2814 2184 112 0 7 chr10 28704365 28704668 -111612097 + AluSx SINE Alu 1 301 -11 379 245 52 43 chr10 28704668 28705125 -111611640 + L1 LINE L1 3332 3975 -2171 * 1753 218 65 28 chr10 28705124 28705660 -111611105 + L1ME1 LINE L1 5549 6104 -62 700 115 26 0 chr10 28705716 28705829 -111610936 + L1MB4 LINE L1 6065 6180 0 227 323 111 20 chr10 28706836 28706935 -111609830 + MIR3 SINE MIR 78 185 -23 1115 260 80 25 chr10 28706945 28707532 -111609233 + L1MC4a LINE L1 5317 5821 -341 2059 126 19 19 chr10 28707719 28708091 -111608674 - Tigger1 DNA MER2_type -97 2321 1950 699 203 0 23 chr10 28708093 28708221 -111608544 + FLAM_A SINE Alu 2 126 -16 2239 118 0 0 chr10 28708229 28708534 -111608231 + AluSq SINE Alu 1 305 -8 11275 117 41 20 chr10 28708541 28709761 -111607004 - Tigger1 DNA MER2_type -462 1956 763 2320 99 0 3 chr10 28709761 28710063 -111606702 - AluSg SINE Alu -9 301 1 2175 117 0 7 chr10 28710073 28710373 -111606392 - AluY SINE Alu -13 298 1 11275 117 41 20 chr10 28710373 28710433 -111606332 - Tigger1 DNA MER2_type -1663 755 698 2191 120 0 7 chr10 28710433 28710742 -111606023 - AluSg SINE Alu -3 307 1 11275 117 41 20 chr10 28710742 28711365 -111605400 - Tigger1 DNA MER2_type -1720 698 1 378 301 92 85 chr10 28711367 28711794 -111604971 + L1MC4a LINE L1 6145 6578 -1230 2551 47 0 0 chr10 28711794 28712090 -111604675 + AluY SINE Alu 1 296 -15 378 301 92 85 chr10 28712090 28712203 -111604562 + L1MC4a LINE L1 6578 6689 -1119 1089 106 61 0 chr10 28712250 28712448 -111604317 + L1MA8 LINE L1 6072 6281 -10 1887 203 81 31 chr10 28712710 28713189 -111603576 - L1ME1 LINE L1 -24 6142 5560 1809 169 7 16 chr10 28713189 28713496 -111603269 + AluJb SINE Alu 1 304 -8 1887 203 81 31 chr10 28713496 28713750 -111603015 - L1ME1 LINE L1 -606 5560 5320 825 148 0 15 chr10 28713750 28713885 -111602880 - FRAM SINE Alu -18 158 26 2127 125 0 0 chr10 28714110 28714406 -111602359 + AluSx SINE Alu 1 296 -16 380 274 31 75 chr10 28714437 28714692 -111602073 - L1MC4 LINE L1 -366 7676 7433 1014 286 18 12 chr10 28714755 28715098 -111601667 - HsTC2a DNA Tc2 -399 345 1 2251 84 0 7 chr10 28715150 28715458 -111601307 + AluY SINE Alu 1 306 0 1045 134 0 7 chr10 28716088 28716237 -111600528 + AluJb SINE Alu 1 148 -164 918 46 0 0 chr10 28716450 28716558 -111600207 + AluY SINE Alu 194 301 -10 21 0 0 0 chr10 28716604 28716625 -111600140 + AT_rich Low_complexity Low_complexity 1 21 0 2268 77 3 39 chr10 28716833 28717145 -111599620 - AluY SINE Alu -10 301 1 264 122 0 0 chr10 28717749 28717790 -111598975 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 1151 149 107 9 chr10 28718261 28718476 -111598289 + MER46A DNA MER2_type 1 236 0 443 296 142 21 chr10 28718682 28718915 -111597850 + MIR SINE MIR 1 261 -1 2477 92 0 0 chr10 28718992 28719298 -111597467 + AluSx SINE Alu 1 306 -6 1910 140 49 0 chr10 28719308 28719594 -111597171 + AluSx SINE Alu 1 300 -12 239 391 0 9 chr10 28719622 28719732 -111597033 + MIR SINE MIR 28 136 -126 261 0 0 0 chr10 28719737 28719766 -111596999 + (A)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 28720020 28720043 -111596722 + AT_rich Low_complexity Low_complexity 1 23 0 2390 102 0 3 chr10 28720341 28720654 -111596111 + AluSx SINE Alu 1 312 0 1851 164 0 10 chr10 28720662 28720966 -111595799 + AluJb SINE Alu 1 301 -11 988 136 13 13 chr10 28721026 28721181 -111595584 + AluJb SINE Alu 157 311 -1 285 29 0 0 chr10 28721833 28721867 -111594898 + (A)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr10 28723469 28723489 -111593276 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 216 143 0 0 chr10 28723903 28723945 -111592820 + (TTGGGG)n Simple_repeat Simple_repeat 3 44 0 314 279 63 27 chr10 28724819 28724930 -111591835 - L2 LINE L2 0 3272 3158 1424 189 14 11 chr10 28725067 28725347 -111591418 - AluJo SINE Alu -27 285 5 247 268 0 62 chr10 28726102 28726199 -111590566 - MIR SINE MIR -87 175 85 2119 159 40 38 chr10 28726232 28726429 -111590336 + MSTA LTR MaLR 1 196 -232 1431 166 0 111 chr10 28726429 28726761 -111590004 + AluJb SINE Alu 2 296 -6 2119 159 40 38 chr10 28726761 28726990 -111589775 + MSTA LTR MaLR 196 428 0 696 189 6 11 chr10 28727089 28727269 -111589496 + GA-rich Low_complexity Low_complexity 2 180 0 468 137 24 65 chr10 28727273 28727397 -111589368 + L1M4 LINE L1 5188 5306 -840 687 152 71 0 chr10 28727422 28727534 -111589231 + AluJb SINE Alu 2 121 -191 1005 225 21 55 chr10 28727550 28727565 -111589200 + L1ME1 LINE L1 5877 5891 -275 1712 146 78 20 chr10 28727565 28727860 -111588905 + AluSx SINE Alu 1 312 0 2225 113 3 7 chr10 28727861 28728170 -111588595 + AluSp SINE Alu 6 313 0 1005 225 21 55 chr10 28728170 28728407 -111588358 + L1ME1 LINE L1 5891 6122 -44 2281 108 0 0 chr10 28728407 28728704 -111588061 + AluSx SINE Alu 2 298 -14 1005 225 21 55 chr10 28728704 28728737 -111588028 + L1ME1 LINE L1 6122 6155 -11 625 206 63 0 chr10 28728758 28728884 -111587881 + FRAM SINE Alu 29 162 -14 2482 87 3 0 chr10 28729046 28729356 -111587409 + AluSq SINE Alu 1 311 -2 1699 169 140 3 chr10 28730089 28730432 -111586333 - MLT1B LTR MaLR 0 390 1 2240 125 0 3 chr10 28730493 28730806 -111585959 - AluSx SINE Alu 0 312 1 2260 119 0 3 chr10 28730813 28731124 -111585641 - AluSg SINE Alu 0 310 1 272 203 17 17 chr10 28731376 28731435 -111585330 + LTR33A LTR ERVL 457 515 -8 498 174 41 0 chr10 28731468 28731566 -111585199 + U13 snRNA snRNA 1 102 -2 751 184 14 0 chr10 28731590 28731731 -111585034 + FAM SINE Alu 23 165 -20 23 0 0 0 chr10 28731828 28731851 -111584914 + AT_rich Low_complexity Low_complexity 1 23 0 2170 115 3 0 chr10 28732151 28732455 -111584310 - AluSg SINE Alu -4 306 2 392 167 0 0 chr10 28732472 28732544 -111584221 + CT-rich Low_complexity Low_complexity 3 74 0 216 0 0 0 chr10 28733346 28733370 -111583395 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 313 31 31 chr10 28733370 28733524 -111583241 + L1ME4a LINE L1 5631 5787 -334 2352 92 3 3 chr10 28733524 28733829 -111582936 + AluSx SINE Alu 1 305 -7 231 313 31 31 chr10 28733829 28733866 -111582899 + L1ME4a LINE L1 5786 5822 -299 1319 157 22 54 chr10 28733868 28734125 -111582640 + L1M1 LINE L1 5101 5354 -828 423 0 0 0 chr10 28734125 28734172 -111582593 + (CA)n Simple_repeat Simple_repeat 2 48 0 1319 157 22 54 chr10 28734172 28734256 -111582509 + L1M1 LINE L1 5354 5439 -743 1160 73 0 0 chr10 28734261 28734397 -111582368 + AluSq/x SINE Alu 1 136 -176 2029 125 48 0 chr10 28734397 28734692 -111582073 + AluSx SINE Alu 1 309 -3 1076 144 0 6 chr10 28734693 28734867 -111581898 + L1M1 LINE L1 5432 5604 -696 1845 183 0 3 chr10 28734869 28735170 -111581595 + AluJo SINE Alu 1 300 -12 189 0 0 0 chr10 28735193 28735214 -111581551 + (CA)n Simple_repeat Simple_repeat 2 22 0 239 193 72 24 chr10 28735220 28735303 -111581462 + L1ME4a LINE L1 5974 6060 -61 1732 134 94 11 chr10 28735355 28735630 -111581135 - AluJo SINE Alu -14 298 1 2384 106 0 0 chr10 28735679 28735990 -111580775 - AluSx SINE Alu -1 311 1 532 212 94 41 chr10 28736277 28736447 -111580318 + MLT1L LTR MaLR 433 611 -4 1455 221 27 22 chr10 28736705 28737076 -111579689 - MLT1B LTR MaLR -6 384 12 1916 164 3 13 chr10 28737181 28737493 -111579272 - AluSx SINE Alu -3 309 1 2203 113 3 0 chr10 28737607 28737899 -111578866 - AluSg SINE Alu -17 293 1 308 359 36 10 chr10 28738106 28738298 -111578467 - L2 LINE L2 -505 2809 2613 258 268 170 0 chr10 28738365 28738477 -111578288 - MIR SINE MIR -130 132 2 1979 160 3 0 chr10 28738792 28739098 -111577667 + AluJb SINE Alu 1 307 -5 1283 185 0 115 chr10 28739247 28739587 -111577178 + AluJo SINE Alu 2 302 0 2019 165 131 0 chr10 28739661 28740043 -111576722 + MSTB1 LTR MaLR 1 432 0 28 0 0 0 chr10 28740332 28740360 -111576405 + AT_rich Low_complexity Low_complexity 1 28 0 921 221 46 14 chr10 28740545 28740762 -111576003 + MER58A DNA MER1_type 1 224 0 241 224 0 0 chr10 28740771 28740820 -111575945 + MER5B DNA MER1_type 2 50 -128 4610 184 26 38 chr10 28740858 28742067 -111574698 - L1MA9 LINE L1 -30 6282 5089 267 229 0 144 chr10 28742070 28742188 -111574577 - MER5B DNA MER1_type -11 167 67 1558 96 10 0 chr10 28742342 28742541 -111574224 + AluSc SINE Alu 1 201 -108 1772 110 8 8 chr10 28742647 28742901 -111573864 + AluSx SINE Alu 56 309 -3 207 0 0 0 chr10 28742913 28742936 -111573829 + (TA)n Simple_repeat Simple_repeat 2 24 0 2201 118 0 0 chr10 28744781 28745069 -111571696 + AluSq SINE Alu 1 288 -25 1136 136 0 11 chr10 28745281 28745457 -111571308 + AluSq SINE Alu 1 174 -139 627 214 8 8 chr10 28745768 28745899 -111570866 - FLAM_A SINE Alu -1 141 11 1151 166 42 0 chr10 28745922 28746143 -111570622 - AluJo SINE Alu 0 309 81 1532 253 85 40 chr10 28746143 28746661 -111570104 - L1M4 LINE L1 -5988 554 14 1778 187 0 0 chr10 28746685 28746984 -111569781 - AluJo SINE Alu -8 304 6 2088 109 3 0 chr10 28747140 28747477 -111569288 + AluSx SINE Alu 1 338 0 815 164 8 0 chr10 28747501 28747629 -111569136 + FLAM_C SINE Alu 1 129 -4 1645 106 0 5 chr10 28747670 28747887 -111568878 - AluSg/x SINE Alu -23 289 74 1575 200 0 7 chr10 28748050 28748345 -111568420 - AluJo SINE Alu -16 296 4 207 0 0 0 chr10 28748367 28748390 -111568375 + (TC)n Simple_repeat Simple_repeat 2 24 0 2049 79 41 38 chr10 28748390 28748680 -111568085 - AluY SINE Alu -13 298 8 24 0 0 0 chr10 28749019 28749043 -111567722 + AT_rich Low_complexity Low_complexity 1 24 0 1950 126 4 0 chr10 28749389 28749703 -111567062 + AluSc SINE Alu 1 315 0 1629 179 0 10 chr10 28750195 28750491 -111566274 + AluSx SINE Alu 1 293 -19 782 198 32 0 chr10 28750499 28750656 -111566109 + L1PB1 LINE L1 5988 6149 -2 1108 152 0 0 chr10 28751135 28751300 -111565465 + AluJb SINE Alu 144 308 -4 3648 202 34 37 chr10 28751300 28752241 -111564524 + L1M4 LINE L1 4325 5262 -884 945 154 0 19 chr10 28752241 28752255 -111564510 + AluSg/x SINE Alu 120 133 -177 2100 128 3 3 chr10 28752255 28752560 -111564205 + AluSx SINE Alu 1 305 -7 945 154 0 19 chr10 28752560 28752701 -111564064 + AluSg/x SINE Alu 133 272 -38 1075 182 28 0 chr10 28752846 28752864 -111563901 + L1M4 LINE L1 5278 5294 -890 2304 106 0 0 chr10 28752864 28753175 -111563590 + AluY SINE Alu 1 311 0 1075 182 28 0 chr10 28753175 28753395 -111563370 + L1M4 LINE L1 5294 5517 -667 512 215 42 103 chr10 28753414 28753585 -111563180 + MER3 DNA MER1_type 4 161 -48 2294 107 13 0 chr10 28753585 28753893 -111562872 + AluSx SINE Alu 1 312 0 512 215 42 103 chr10 28753893 28753935 -111562830 + MER3 DNA MER1_type 161 204 -5 1964 137 0 51 chr10 28754310 28754437 -111562328 + AluJo SINE Alu 1 133 -179 2301 112 0 0 chr10 28754437 28754733 -111562032 - AluSx SINE Alu -16 296 1 1964 137 0 51 chr10 28754733 28754919 -111561846 + AluJo SINE Alu 133 298 -14 2107 120 30 0 chr10 28755472 28755773 -111560992 - AluSx SINE Alu -2 310 1 180 77 0 0 chr10 28756104 28756130 -111560635 + (A)n Simple_repeat Simple_repeat 1 26 0 416 331 102 0 chr10 28756213 28756370 -111560395 - MER91A DNA MER1_type -23 173 1 1446 185 56 14 chr10 28756571 28756858 -111559907 + AluJo SINE Alu 1 299 -13 308 89 0 0 chr10 28756858 28756903 -111559862 + (GGA)n Simple_repeat Simple_repeat 1 45 0 345 157 13 50 chr10 28756963 28757122 -111559643 + T-rich Low_complexity Low_complexity 6 158 0 24 91 0 0 chr10 28757133 28757199 -111559566 + AT_rich Low_complexity Low_complexity 1 66 0 34 98 0 0 chr10 28757222 28757314 -111559451 + AT_rich Low_complexity Low_complexity 1 92 0 1092 198 39 4 chr10 28757607 28757864 -111558901 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 28757875 28757896 -111558869 + AT_rich Low_complexity Low_complexity 1 21 0 216 162 0 0 chr10 28758541 28758578 -111558187 + GA-rich Low_complexity Low_complexity 2 38 0 2583 53 3 0 chr10 28759381 28759685 -111557080 - AluY SINE Alu -6 305 1 1612 175 54 0 chr10 28760471 28760751 -111556014 + AluJo SINE Alu 1 295 -17 1108 302 40 30 chr10 28761675 28762172 -111554593 - MLT1J LTR MaLR -9 502 1 2433 88 0 3 chr10 28762376 28762684 -111554081 + AluSq SINE Alu 1 307 -6 209 213 0 0 chr10 28762992 28763039 -111553726 + (TA)n Simple_repeat Simple_repeat 1 47 0 212 264 34 20 chr10 28763167 28763315 -111553450 + (TA)n Simple_repeat Simple_repeat 1 150 0 384 190 13 0 chr10 28763442 28763521 -111553244 + LTR24C LTR ERV1 556 635 0 24 0 0 0 chr10 28763576 28763600 -111553165 + AT_rich Low_complexity Low_complexity 1 24 0 2114 96 13 35 chr10 28763617 28763931 -111552834 + AluSc SINE Alu 3 309 0 2407 57 7 17 chr10 28765744 28766045 -111550720 + AluY SINE Alu 1 298 -13 2237 109 10 10 chr10 28766115 28766427 -111550338 + AluSx SINE Alu 1 312 0 203 191 15 0 chr10 28766554 28766622 -111550143 + (TA)n Simple_repeat Simple_repeat 2 70 0 2364 186 81 14 chr10 28766653 28767207 -111549558 - LTR49 LTR ERV1 0 595 5 360 0 0 0 chr10 28767207 28767247 -111549518 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 162 0 0 chr10 28768130 28768167 -111548598 + (TG)n Simple_repeat Simple_repeat 2 38 0 282 148 0 0 chr10 28768202 28768256 -111548509 + (TG)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr10 28768335 28768357 -111548408 + AT_rich Low_complexity Low_complexity 1 22 0 2748 62 0 0 chr10 28768616 28768957 -111547808 + L1PA7 LINE L1 5801 6141 -13 1499 205 72 11 chr10 28769403 28769764 -111547001 + LTR49 LTR ERV1 211 593 -2 1874 180 43 7 chr10 28769768 28770178 -111546587 + LTR49-int LTR ERV1 1 1327 -4619 2665 180 15 27 chr10 28770213 28770479 -111546286 + LTR49-int LTR ERV1 361 629 -5317 8349 53 2 0 chr10 28770479 28771443 -111545322 + LTR5 LTR ERVK 1 966 -3 2665 180 15 27 chr10 28771443 28771704 -111545061 + LTR49-int LTR ERV1 629 1476 -4470 2645 190 35 8 chr10 28771744 28772254 -111544511 + LTR49-int LTR ERV1 840 1363 -4968 971 175 52 10 chr10 28772256 28772450 -111544315 - L1PA15 LINE L1 -5 6160 5959 1182 153 37 23 chr10 28772589 28772786 -111543979 + LTR49-int LTR ERV1 1372 1574 -4757 5404 108 26 2 chr10 28772786 28773593 -111543172 + L1MA1 LINE L1 5477 6302 0 1182 153 37 23 chr10 28773593 28773611 -111543154 + LTR49-int LTR ERV1 1574 1590 -4741 2043 128 3 3 chr10 28773897 28774187 -111542578 - AluSg SINE Alu -20 290 1 302 26 0 0 chr10 28775747 28775785 -111540980 - L1PA12 LINE L1 -357 5817 5780 2316 99 0 14 chr10 28775785 28776122 -111540643 + L1PA12 LINE L1 5830 6168 0 2004 71 26 11 chr10 28776274 28776543 -111540222 + AluY SINE Alu 39 311 0 847 223 49 111 chr10 28776866 28777252 -111539513 - MLT1A2 LTR MaLR -12 362 1 301 270 45 9 chr10 28777253 28777364 -111539401 + L1M4 LINE L1 3540 3654 -2492 359 271 32 72 chr10 28777417 28777668 -111539097 + L1M4 LINE L1 4644 4884 -1262 568 298 73 29 chr10 28777686 28778026 -111538739 - L2 LINE L2 -211 3102 2748 1445 104 0 42 chr10 28778226 28778400 -111538365 - L1P LINE L1 -959 5187 5025 1837 93 93 0 chr10 28778400 28778690 -111538075 - AluSg SINE Alu 0 314 1 1445 104 0 42 chr10 28778690 28778774 -111537991 - L1P LINE L1 -1121 5025 4939 6260 84 12 22 chr10 28778774 28779374 -111537391 + L1PA8 LINE L1 5184 5773 -399 2354 91 0 10 chr10 28779374 28779681 -111537084 + AluY SINE Alu 1 304 -7 6260 84 12 22 chr10 28779681 28780069 -111536696 + L1PA8 LINE L1 5773 6163 -9 32 26 0 0 chr10 28780076 28780115 -111536650 + AT_rich Low_complexity Low_complexity 1 39 0 1140 183 64 3 chr10 28781417 28781712 -111535053 + MER33 DNA MER1_type 6 318 -6 1285 149 0 0 chr10 28782194 28782382 -111534383 - AluSx SINE Alu -94 218 31 5869 136 93 23 chr10 28782382 28784137 -111532628 + pTR5 LTR ERV1 282 2295 -143 225 114 0 0 chr10 28784137 28784172 -111532593 - AluSx SINE Alu -266 35 1 2286 126 0 0 chr10 28784730 28785040 -111531725 + AluSg SINE Alu 1 310 0 243 250 231 9 chr10 28785410 28785518 -111531247 - MIR SINE MIR -117 145 14 22 35 0 0 chr10 28786568 28786597 -111530168 + AT_rich Low_complexity Low_complexity 1 29 0 2483 75 0 3 chr10 28787601 28787908 -111528857 - AluY SINE Alu -5 306 1 341 161 145 65 chr10 28788091 28788215 -111528550 + MIR SINE MIR 95 228 -34 1075 226 73 35 chr10 28788221 28788535 -111528230 + MER31-int LTR ERV1 638 963 -3973 229 156 44 0 chr10 28788598 28788643 -111528122 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1448 159 51 14 chr10 28788856 28789152 -111527613 + MER67A LTR ERV1 156 462 -81 22 35 0 0 chr10 28789971 28790000 -111526765 + AT_rich Low_complexity Low_complexity 1 29 0 1666 97 0 0 chr10 28790412 28790628 -111526137 + AluSc SINE Alu 74 289 -20 2412 58 0 16 chr10 28790628 28790937 -111525828 + AluY SINE Alu 1 304 -7 2355 77 3 7 chr10 28791093 28791393 -111525372 - AluY SINE Alu -11 300 2 2133 114 0 7 chr10 28791627 28791935 -111524830 + AluSx SINE Alu 1 306 -6 22 35 0 0 chr10 28792456 28792485 -111524280 + AT_rich Low_complexity Low_complexity 1 29 0 2196 89 0 67 chr10 28792610 28792937 -111523828 + AluY SINE Alu 1 305 -6 2316 97 3 13 chr10 28793081 28793390 -111523375 - AluSc SINE Alu -3 306 1 2258 91 0 7 chr10 28793393 28793691 -111523074 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28794176 28794199 -111522566 + AT_rich Low_complexity Low_complexity 1 23 0 2247 93 7 32 chr10 28794374 28794684 -111522081 - AluSp SINE Alu -11 302 1 1929 184 3 7 chr10 28794799 28795109 -111521656 - AluJb SINE Alu -3 309 1 2350 105 0 3 chr10 28795320 28795626 -111521139 - AluSx SINE Alu -7 305 1 1940 154 11 0 chr10 28795629 28795915 -111520850 - AluSx SINE Alu -23 289 1 2108 127 41 120 chr10 28796351 28796816 -111519949 - MSTA LTR MaLR 0 428 1 2040 93 42 39 chr10 28796897 28797207 -111519558 + AluSx SINE Alu 1 311 -1 255 313 17 73 chr10 28798579 28798758 -111518007 - L2 LINE L2 -156 3116 2948 775 264 77 110 chr10 28798895 28799612 -111517153 - L2 LINE L2 -513 2801 2109 6360 68 2 5 chr10 28800396 28801275 -111515490 - L1PA8A LINE L1 -1 6130 5254 223 154 15 31 chr10 28801409 28801474 -111515291 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 779 134 10 139 chr10 28801523 28801724 -111515041 - MER2 DNA MER2_type -170 175 1 233 239 60 0 chr10 28801822 28801889 -111514876 + MER5A DNA MER1_type 31 101 -88 776 245 5 22 chr10 28802214 28802398 -111514367 + MIR SINE MIR 58 238 -24 261 333 30 85 chr10 28802479 28802552 -111514213 + L2 LINE L2 2842 2918 -354 1759 142 0 111 chr10 28802552 28802747 -111514018 - AluJo SINE Alu -6 306 164 2132 92 18 0 chr10 28802747 28803028 -111513737 - AluSq SINE Alu -27 286 1 1759 142 0 111 chr10 28803028 28803176 -111513589 - AluJo SINE Alu -148 164 1 261 333 30 85 chr10 28803176 28803372 -111513393 + L2 LINE L2 2918 3096 -176 370 109 0 0 chr10 28803515 28803570 -111513195 - Alu SINE Alu -244 55 1 180 0 26 79 chr10 28803782 28803820 -111512945 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 281 305 49 59 chr10 28804800 28805003 -111511762 + LTR40a LTR ERVL 209 409 -110 263 310 0 0 chr10 28805001 28805059 -111511706 - LTR40a LTR ERVL -222 297 240 * 310 234 143 0 chr10 28805139 28805216 -111511549 - LTR40b LTR ERVL -293 169 82 2397 91 0 0 chr10 28805224 28805522 -111511243 + AluSx SINE Alu 1 298 -14 1875 165 0 10 chr10 28805532 28805823 -111510942 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28805823 28805844 -111510921 + AT_rich Low_complexity Low_complexity 1 21 0 970 67 8 0 chr10 28806077 28806196 -111510569 + AluY SINE Alu 9 128 -183 1581 198 67 3 chr10 28806196 28806585 -111510180 - Tigger6a DNA MER2_type -630 453 40 856 188 74 0 chr10 28806970 28807146 -111509619 + MER74A LTR ERVL 1 189 -369 1277 226 13 7 chr10 28807185 28807486 -111509279 + MER74A LTR ERVL 179 481 -77 205 315 0 0 chr10 28807627 28807681 -111509084 - MIR SINE MIR -196 66 13 398 254 51 8 chr10 28807703 28807821 -111508944 - MIR SINE MIR -4 258 136 783 181 8 0 chr10 28807826 28807959 -111508806 - AluJo SINE Alu -178 134 1 431 272 14 48 chr10 28807964 28808111 -111508654 - MIR SINE MIR -116 146 5 23 54 0 0 chr10 28808165 28808202 -111508563 + AT_rich Low_complexity Low_complexity 1 37 0 2265 105 0 0 chr10 28808291 28808585 -111508180 - AluSc SINE Alu -15 294 1 1177 242 102 44 chr10 28808901 28809360 -111507405 - MLT1H1 LTR MaLR -22 533 48 895 204 66 15 chr10 28809361 28809557 -111507208 - AluJo SINE Alu -18 294 89 317 217 0 0 chr10 28809560 28809620 -111507145 - MLT1H1 LTR MaLR -495 60 1 715 210 14 0 chr10 28809743 28809886 -111506879 + AluSq/x SINE Alu 1 145 -167 347 278 41 0 chr10 28810149 28810246 -111506519 + L3 LINE CR1 1460 1560 -17 1305 132 0 0 chr10 28810649 28810831 -111505934 - AluJ SINE Alu -2 310 129 1699 179 0 13 chr10 28810839 28811140 -111505625 - AluJo SINE Alu -15 297 1 731 169 0 8 chr10 28811189 28811307 -111505458 - AluJ SINE Alu -192 120 4 1372 215 129 22 chr10 28811895 28812383 -111504382 - L1ME3A LINE L1 0 6170 5631 284 200 56 11 chr10 28813251 28813341 -111503424 - L1MC4 LINE L1 -6 8036 7943 1441 175 57 0 chr10 28813356 28813602 -111503163 - AluJb SINE Alu -52 260 1 30 27 0 0 chr10 28813641 28813678 -111503087 + AT_rich Low_complexity Low_complexity 1 37 0 380 209 173 0 chr10 28813678 28813788 -111502977 - L1MC4 LINE L1 -147 7895 7767 617 151 0 0 chr10 28813788 28813881 -111502884 + AluSx SINE Alu 3 95 -217 1642 99 14 5 chr10 28813898 28814121 -111502644 + AluSx SINE Alu 72 296 -14 502 188 34 170 chr10 28814129 28814453 -111502312 - L1MC4 LINE L1 -273 7769 7490 * 583 213 71 36 chr10 28814452 28814677 -111502088 - L1ME4a LINE L1 -295 5826 5594 361 256 35 81 chr10 28814793 28814965 -111501800 + L1MC4a LINE L1 7294 7457 -351 465 282 91 38 chr10 28815365 28815759 -111501006 - L1MC4 LINE L1 -15 8027 7613 27 29 0 0 chr10 28815967 28816001 -111500764 + AT_rich Low_complexity Low_complexity 1 34 0 866 153 0 0 chr10 28817592 28817723 -111499042 + AluJo SINE Alu 1 131 -181 1984 137 39 0 chr10 28817729 28818014 -111498751 + AluSx SINE Alu 3 298 -14 933 220 23 0 chr10 28818059 28818236 -111498529 + AluJo SINE Alu 118 298 -14 1281 162 165 13 chr10 28818401 28818704 -111498061 + L1MB7 LINE L1 5823 6171 -13 2234 118 0 3 chr10 28819929 28820234 -111496531 - AluSq SINE Alu -7 306 3 1637 179 24 30 chr10 28821173 28821470 -111495295 + AluJo SINE Alu 1 295 -17 537 230 0 0 chr10 28821488 28821588 -111495177 + FRAM SINE Alu 1 100 -76 1007 127 63 39 chr10 28821647 28821852 -111494913 + MER2 DNA MER2_type 1 210 -135 244 282 28 0 chr10 28821880 28821951 -111494814 + MER2 DNA MER2_type 273 345 0 2117 106 0 0 chr10 28822203 28822477 -111494288 - AluSx SINE Alu -38 274 1 815 157 0 15 chr10 28822883 28823017 -111493748 - FLAM_C SINE Alu -1 132 1 216 196 0 0 chr10 28823019 28823065 -111493700 + T-rich Low_complexity Low_complexity 2 47 0 2149 126 10 0 chr10 28823067 28823376 -111493389 - AluSp SINE Alu -1 312 1 1812 148 38 14 chr10 28824148 28824439 -111492326 + AluJb SINE Alu 1 298 -14 1238 122 0 36 chr10 28824489 28824685 -111492080 - AluSg/x SINE Alu -9 303 115 2141 119 3 0 chr10 28824715 28825017 -111491748 - AluSx SINE Alu -9 303 1 893 102 14 54 chr10 28825526 28825673 -111491092 + L1PB3 LINE L1 6011 6151 -3 24 32 0 0 chr10 28825675 28825706 -111491059 + AT_rich Low_complexity Low_complexity 1 31 0 570 113 38 0 chr10 28825795 28825875 -111490890 - AluSg/x SINE Alu -13 296 214 684 175 114 0 chr10 28825927 28826041 -111490724 - FLAM_A SINE Alu -6 127 1 2454 93 0 3 chr10 28826061 28826374 -111490391 - AluSq SINE Alu -1 312 1 2096 145 7 0 chr10 28826513 28826823 -111489942 - AluJb SINE Alu 0 312 1 1140 161 55 5 chr10 28826846 28827045 -111489720 + AluJb SINE Alu 83 291 -21 442 318 112 40 chr10 28827053 28827427 -111489338 - L2 LINE L2 -2659 655 255 1969 116 3 27 chr10 28828274 28828406 -111488359 + AluSx SINE Alu 6 140 -172 2144 116 0 28 chr10 28828406 28828726 -111488039 + AluSx SINE Alu 1 311 -1 1969 116 3 27 chr10 28828726 28828886 -111487879 + AluSx SINE Alu 140 291 -21 417 239 28 0 chr10 28829403 28829512 -111487253 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28829606 28829731 -111487034 - L1ME1 LINE L1 -5 6161 6016 1225 184 88 33 chr10 28829742 28830073 -111486692 - L1ME1 LINE L1 -582 5602 5254 2400 56 10 13 chr10 28830091 28830394 -111486371 - AluY SINE Alu -9 302 1 2431 70 0 16 chr10 28830404 28830718 -111486047 - AluY SINE Alu -2 309 1 438 221 49 8 chr10 28830718 28830899 -111485866 - L1M4 LINE L1 -3931 2755 2525 1788 171 7 0 chr10 28830908 28831237 -111485528 + AluSx SINE Alu 1 331 0 1089 228 134 55 chr10 28831278 28832060 -111484705 - L1M4 LINE L1 -4706 1940 1107 2080 134 3 7 chr10 28832412 28832719 -111484046 - AluSx SINE Alu -6 306 1 591 92 5 87 chr10 28832837 28833033 -111483732 + (TA)n Simple_repeat Simple_repeat 1 180 0 1530 130 130 16 chr10 28833705 28833958 -111482807 - AluSg SINE Alu -15 295 14 306 250 176 27 chr10 28834126 28834355 -111482410 - LTR41 LTR ERVL 0 795 510 2377 88 3 0 chr10 28834958 28835252 -111481513 - AluSg SINE Alu -15 295 1 857 174 12 124 chr10 28835283 28835370 -111481395 - AluJo SINE Alu -92 220 125 2235 118 0 7 chr10 28835370 28835674 -111481091 - AluSx SINE Alu -8 304 3 2195 92 6 47 chr10 28835684 28836001 -111480764 - AluSx SINE Alu -7 305 2 857 174 12 124 chr10 28836001 28836144 -111480621 - AluJo SINE Alu -197 115 6 326 156 32 50 chr10 28836155 28836235 -111480530 + LTR41 LTR ERVL 440 771 0 21 0 0 0 chr10 28836316 28836337 -111480428 + AT_rich Low_complexity Low_complexity 1 21 0 886 149 0 0 chr10 28836339 28836460 -111480305 - FLAM_C SINE Alu -12 121 1 181 299 0 30 chr10 28836617 28836684 -111480081 + L2 LINE L2 3201 3265 -7 2430 56 3 17 chr10 28836952 28837254 -111479511 + AluY SINE Alu 1 298 -13 1595 118 77 37 chr10 28837755 28838027 -111478738 - AluSx SINE Alu -1 311 29 2046 126 7 13 chr10 28838372 28838681 -111478084 + AluJb SINE Alu 1 307 -5 1343 140 212 8 chr10 28840112 28840362 -111476403 + AluJo SINE Alu 2 302 0 2344 110 0 0 chr10 28840501 28840809 -111475956 + AluSq SINE Alu 1 308 -5 2545 37 0 3 chr10 28840943 28841239 -111475526 + AluY SINE Alu 1 295 -16 881 111 8 8 chr10 28841481 28841607 -111475158 + FLAM_C SINE Alu 1 126 -17 200 217 0 0 chr10 28841639 28841685 -111475080 + A-rich Low_complexity Low_complexity 1 46 0 1748 163 3 14 chr10 28841839 28842155 -111474610 + AluSx SINE Alu 1 313 0 1799 102 81 35 chr10 28842314 28842598 -111474167 - AluY SINE Alu -14 297 1 2096 126 0 0 chr10 28842598 28842884 -111473881 - AluSx SINE Alu -18 294 9 2193 123 0 7 chr10 28843000 28843310 -111473455 - AluSx SINE Alu -4 308 1 1949 141 7 7 chr10 28844109 28844406 -111472359 - AluSx SINE Alu -15 297 1 494 222 0 9 chr10 28844653 28844761 -111472004 - MER104 DNA Tc2 -71 109 3 1928 155 7 3 chr10 28844775 28845072 -111471693 - AluJo SINE Alu -14 298 1 679 247 101 31 chr10 28845162 28845389 -111471376 - MIR SINE MIR 0 262 20 2464 95 20 80 chr10 28845503 28845902 -111470863 - THE1C LTR MaLR 0 375 1 2186 107 0 20 chr10 28846691 28846991 -111469774 - AluSx SINE Alu -18 294 1 2199 109 3 3 chr10 28847793 28848086 -111468679 - AluSg SINE Alu -17 293 1 354 306 106 15 chr10 28848426 28848625 -111468140 + MIR SINE MIR 14 230 -32 1749 174 7 0 chr10 28848663 28848978 -111467787 - AluJb SINE Alu 0 317 1 750 124 26 0 chr10 28849374 28849487 -111467278 - AluSx SINE Alu -5 307 192 1097 113 0 0 chr10 28849487 28849628 -111467137 - AluSx SINE Alu -172 141 1 1766 190 7 3 chr10 28849977 28850282 -111466483 - AluJo SINE Alu -6 306 1 792 132 0 0 chr10 28851364 28851470 -111465295 + U6 snRNA snRNA 1 106 -1 1782 157 10 17 chr10 28851706 28851999 -111464766 + AluJo SINE Alu 1 291 -21 281 329 74 7 chr10 28852438 28852587 -111464178 - MIR SINE MIR -47 215 57 2372 107 0 7 chr10 28852720 28853030 -111463735 + AluSg SINE Alu 1 308 -2 21 0 0 0 chr10 28853607 28853628 -111463137 + AT_rich Low_complexity Low_complexity 1 21 0 2381 157 33 28 chr10 28853658 28854086 -111462679 - Tigger2a DNA MER2_type 0 434 5 2549 69 0 0 chr10 28854393 28854696 -111462069 + AluSg SINE Alu 1 303 -7 2183 118 0 13 chr10 28854901 28855206 -111461559 - AluSq SINE Alu -12 301 1 2203 105 6 16 chr10 28855545 28855859 -111460906 - AluSp SINE Alu -2 311 1 709 275 7 0 chr10 28855878 28856027 -111460738 - MER58A DNA MER1_type 0 151 2 873 144 0 8 chr10 28856200 28856350 -111460415 - FLAM_C SINE Alu 0 149 1 193 240 82 111 chr10 28856611 28856782 -111459983 - L2 LINE L2 -787 2527 2362 21 0 0 0 chr10 28857003 28857024 -111459741 + AT_rich Low_complexity Low_complexity 1 21 0 348 321 124 19 chr10 28857044 28857253 -111459512 - MIR SINE MIR -16 246 16 332 116 13 247 chr10 28857652 28857756 -111459009 - L1PB3 LINE L1 -279 5875 5819 2266 89 3 0 chr10 28857756 28858047 -111458718 + AluY SINE Alu 1 292 -19 332 116 13 247 chr10 28858047 28858100 -111458665 - L1PB3 LINE L1 -335 5819 5755 1904 157 0 4 chr10 28859603 28859916 -111456849 - AluSg SINE Alu 0 312 1 2087 130 3 0 chr10 28859918 28860217 -111456548 - AluSx SINE Alu -9 303 4 7152 212 56 25 chr10 28862519 28863229 -111453536 - L1 LINE L1 -2234 3912 3225 2420 96 0 6 chr10 28863229 28863542 -111453223 + AluSq SINE Alu 3 313 0 7152 212 56 25 chr10 28863542 28864945 -111451820 - L1 LINE L1 -2921 3225 1750 5207 161 60 30 chr10 28864973 28865098 -111451667 - L1PBb LINE L1 -4759 1445 1325 1937 125 24 20 chr10 28865098 28865393 -111451372 - AluSx SINE Alu -16 296 1 5207 161 60 30 chr10 28865393 28866670 -111450095 - L1PBb LINE L1 -4879 1325 1 2819 298 46 35 chr10 28866651 28868255 -111448510 - L1PBa LINE L1 -5240 1623 3 * 2578 41 0 29 chr10 28868318 28868632 -111448133 + AluY SINE Alu 1 305 -6 2276 108 0 3 chr10 28868827 28869122 -111447643 + AluSg SINE Alu 1 294 -16 1962 152 17 0 chr10 28869372 28869669 -111447096 - AluSx SINE Alu -10 302 1 1513 194 60 0 chr10 28869669 28869952 -111446813 - AluJo SINE Alu -8 304 5 805 173 0 0 chr10 28870183 28870310 -111446455 + FLAM_C SINE Alu 1 127 -6 2135 125 0 10 chr10 28870569 28870874 -111445891 - AluSg SINE Alu -2 308 7 2043 131 60 35 chr10 28871325 28871691 -111445074 - THE1C LTR MaLR 0 375 1 2340 146 33 5 chr10 28871968 28872359 -111444406 + MSTA LTR MaLR 1 402 -26 284 125 0 0 chr10 28872392 28872432 -111444333 + MSTA LTR MaLR 389 428 0 2266 95 3 0 chr10 28872696 28872981 -111443784 + AluSx SINE Alu 12 297 -15 23 33 0 0 chr10 28873017 28873047 -111443718 + AT_rich Low_complexity Low_complexity 1 30 0 2251 98 13 3 chr10 28873631 28873936 -111442829 + AluSc SINE Alu 1 308 -1 186 71 0 0 chr10 28874038 28874066 -111442699 + (T)n Simple_repeat Simple_repeat 1 28 0 393 263 169 78 chr10 28874439 28874759 -111442006 - L2 LINE L2 -18 3295 2947 244 167 24 0 chr10 28875315 28875357 -111441408 - MER57A LTR ERV1 -66 337 295 2352 103 3 6 chr10 28876172 28876484 -111440281 + AluSx SINE Alu 1 311 -1 2240 107 33 0 chr10 28876734 28877033 -111439732 + AluSx SINE Alu 1 309 -3 483 198 72 54 chr10 28877266 28877409 -111439356 - MER5A DNA MER1_type -40 149 4 1643 137 27 34 chr10 28877940 28878232 -111438533 + AluJb SINE Alu 11 300 -12 2223 101 0 17 chr10 28879576 28879874 -111436891 - AluSx SINE Alu -19 293 1 2025 111 56 0 chr10 28879874 28880161 -111436604 - AluSx SINE Alu -7 305 3 255 268 0 0 chr10 28880208 28880264 -111436501 - Charlie1 DNA MER1_type 0 2761 2706 359 286 103 33 chr10 28880353 28880559 -111436206 - L1ME3A LINE L1 -207 5963 5744 2114 113 0 0 chr10 28880578 28880902 -111435863 + AluY SINE Alu 1 324 0 2156 96 3 7 chr10 28880916 28881209 -111435556 + AluSc SINE Alu 1 292 -17 241 196 0 0 chr10 28881269 28881325 -111435440 - Charlie1 DNA MER1_type -76 2685 2630 430 266 144 6 chr10 28881378 28881551 -111435214 - Charlie1 DNA MER1_type -2562 199 3 2401 94 0 0 chr10 28881826 28882135 -111434630 - AluSc SINE Alu 0 309 1 192 40 0 0 chr10 28882281 28882306 -111434459 + (CA)n Simple_repeat Simple_repeat 2 26 0 2050 142 10 0 chr10 28882991 28883294 -111433471 - AluSq SINE Alu -7 306 1 2256 102 0 0 chr10 28883326 28883619 -111433146 + AluSx SINE Alu 13 305 -7 198 254 42 56 chr10 28883763 28883834 -111432931 - L2 LINE L2 -1056 2258 2189 254 379 52 26 chr10 28884729 28884882 -111431883 + L2 LINE L2 2573 2729 -585 243 282 122 30 chr10 28885061 28885192 -111431573 + L2 LINE L2 2912 3054 -218 1847 131 50 0 chr10 28885205 28885487 -111431278 - AluSx SINE Alu -14 298 3 209 277 0 0 chr10 28885510 28885557 -111431208 + L2 LINE L2 3221 3267 -5 434 171 0 34 chr10 28886201 28886289 -111430476 + AluJ/FRAM SINE Alu 217 301 -11 28 0 0 0 chr10 28886297 28886325 -111430440 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 28886473 28886495 -111430270 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr10 28886661 28886686 -111430079 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 2431 85 3 0 chr10 28889544 28889851 -111426914 - AluSg SINE Alu -2 308 1 231 133 0 0 chr10 28890870 28890915 -111425850 + (ATG)n Simple_repeat Simple_repeat 1 45 0 701 250 75 48 chr10 28891089 28891421 -111425344 + L1ME LINE L1 5379 5659 -462 2002 111 7 0 chr10 28891750 28892052 -111424713 + AluSx SINE Alu 1 304 0 207 0 0 0 chr10 28892067 28892090 -111424675 + (TAG)n Simple_repeat Simple_repeat 1 23 0 2133 116 7 7 chr10 28892150 28892453 -111424312 - AluSq SINE Alu -10 303 1 25 0 0 0 chr10 28893107 28893132 -111423633 + AT_rich Low_complexity Low_complexity 1 25 0 200 302 0 0 chr10 28893172 28893235 -111423530 + T-rich Low_complexity Low_complexity 1 63 0 421 268 179 37 chr10 28893568 28893814 -111422951 - L2 LINE L2 -1407 1907 1627 2236 126 0 0 chr10 28894349 28894650 -111422115 - AluSx SINE Alu -11 301 1 808 256 18 27 chr10 28894925 28895144 -111421621 + MIR SINE MIR 32 248 -14 27 62 0 0 chr10 28895641 28895689 -111421076 + AT_rich Low_complexity Low_complexity 1 48 0 1879 161 3 10 chr10 28895698 28896003 -111420762 + AluJo SINE Alu 1 303 -9 1682 164 16 131 chr10 28896502 28896822 -111419943 - L1M4 LINE L1 -864 5282 5050 1684 114 40 120 chr10 28896822 28897009 -111419756 - AluSx SINE Alu -13 299 147 2305 97 0 0 chr10 28897009 28897320 -111419445 - AluY SINE Alu 0 311 1 1684 114 40 120 chr10 28897320 28897457 -111419308 - AluSx SINE Alu -165 147 1 1682 164 16 131 chr10 28897457 28897686 -111419079 - L1M4 LINE L1 -1096 5050 4796 714 190 7 0 chr10 28897720 28897857 -111418908 - L1MEc LINE L1 -4274 2122 1985 376 255 69 22 chr10 28897928 28898204 -111418561 - L1MEc LINE L1 -4904 1357 1000 1670 272 83 37 chr10 28898214 28898731 -111418034 - L1MEc LINE L1 -5651 745 190 2311 105 0 3 chr10 28898731 28899044 -111417721 - AluSx SINE Alu 0 312 1 1670 272 83 37 chr10 28899044 28899177 -111417588 - L1MEc LINE L1 -6206 190 65 459 318 62 88 chr10 28899192 28899544 -111417221 + L2 LINE L2 2930 3272 0 501 307 84 13 chr10 28900006 28900315 -111416450 - L1ME4a LINE L1 -283 5838 5508 2335 87 0 7 chr10 28900322 28900620 -111416145 - AluSg SINE Alu -14 296 1 2204 107 0 7 chr10 28901126 28901425 -111415340 - AluSx SINE Alu -15 297 1 29 47 0 0 chr10 28901922 28901965 -111414800 + AT_rich Low_complexity Low_complexity 1 43 0 197 277 0 0 chr10 28902076 28902123 -111414642 + L2 LINE L2 3226 3272 0 219 192 39 64 chr10 28903463 28903541 -111413224 + MIR SINE MIR 176 251 -11 428 279 84 6 chr10 28905840 28906019 -111410746 - L2 LINE L2 -410 2904 2712 26 64 0 0 chr10 28906330 28906377 -111410388 + AT_rich Low_complexity Low_complexity 1 47 0 1639 84 0 50 chr10 28906685 28906923 -111409842 - AluY SINE Alu -6 305 80 2127 124 0 13 chr10 28906952 28907126 -111409639 - AluSx SINE Alu -5 307 137 2300 105 0 3 chr10 28907126 28907439 -111409326 - AluSx SINE Alu 0 312 1 2127 124 0 13 chr10 28907439 28907571 -111409194 - AluSx SINE Alu -175 137 5 21 0 0 0 chr10 28907962 28907983 -111408782 + AT_rich Low_complexity Low_complexity 1 21 0 2561 162 44 25 chr10 28908062 28908580 -111408185 - L1MB8 LINE L1 0 6178 5651 25 31 0 0 chr10 28909002 28909034 -111407731 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr10 28909064 28909092 -111407673 + AT_rich Low_complexity Low_complexity 1 28 0 693 267 24 34 chr10 28909718 28909924 -111406841 - MIR SINE MIR -24 238 35 758 224 22 22 chr10 28910200 28910383 -111406382 - MER58A DNA MER1_type -4 220 38 2116 124 6 39 chr10 28910998 28911185 -111405580 - MER46B DNA MER2_type -2495 236 190 2427 45 38 3 chr10 28911185 28911477 -111405288 - AluY SINE Alu -9 302 1 2116 124 6 39 chr10 28911477 28911640 -111405125 - MER46B DNA MER2_type -2541 190 23 1449 179 97 24 chr10 28911640 28911969 -111404796 - MER47A DNA MER2_type 0 366 14 335 246 0 0 chr10 28911980 28912049 -111404716 - MER47A DNA MER2_type -297 69 1 584 180 45 0 chr10 28912247 28912358 -111404407 - L1M3 LINE L1 -404 5779 5664 1869 128 75 0 chr10 28912715 28912996 -111403769 + AluSx SINE Alu 2 303 -9 1648 182 7 4 chr10 28914326 28914601 -111402164 + AluJo SINE Alu 5 280 -32 204 40 0 0 chr10 28914601 28914626 -111402139 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 261 0 0 0 chr10 28915783 28915812 -111400953 + (TG)n Simple_repeat Simple_repeat 2 30 0 499 81 0 14 chr10 28915832 28915906 -111400859 + MER34C LTR ERV1 424 496 -89 1903 125 26 42 chr10 28916432 28916744 -111400021 - AluSx SINE Alu -5 307 1 1928 119 16 3 chr10 28917363 28917666 -111399099 - L1PA13 LINE L1 -3 6160 5854 1759 102 27 5 chr10 28917667 28918088 -111398677 + L1P4 LINE L1 5067 5496 -665 * 3081 139 28 11 chr10 28918075 28918643 -111398122 + L1M2 LINE L1 5219 5797 -503 480 282 176 0 chr10 28918615 28918803 -111397962 + L1PA16 LINE L1 5936 6156 -10 * 1991 135 3 10 chr10 28918831 28919128 -111397637 + AluSq SINE Alu 1 295 -18 2067 149 95 46 chr10 28919129 28919625 -111397140 + L1MA5 LINE L1 5776 6295 -5 398 259 202 6 chr10 28919655 28919834 -111396931 + MLT1G1 LTR MaLR 78 251 -279 * 559 234 69 7 chr10 28919831 28919976 -111396789 + MLT1G1 LTR MaLR 429 582 -13 256 305 10 0 chr10 28920276 28920374 -111396391 - MLT1G3 LTR MaLR -180 415 228 1754 143 16 147 chr10 28920378 28920534 -111396231 - L1 LINE L1 -908 5238 5063 2091 68 0 15 chr10 28920534 28920797 -111395968 - AluY SINE Alu -52 259 1 1754 143 16 147 chr10 28920797 28921136 -111395629 - L1 LINE L1 -1083 5063 4808 2268 86 24 0 chr10 28921358 28921650 -111395115 + AluY SINE Alu 1 299 -12 30 27 0 0 chr10 28922613 28922650 -111394115 + AT_rich Low_complexity Low_complexity 1 37 0 1117 165 5 31 chr10 28922692 28922886 -111393879 - AluJo SINE Alu -123 189 1 420 216 222 6 chr10 28923004 28923166 -111393599 - L1ME1 LINE L1 -4 6162 5966 1730 119 84 21 chr10 28923215 28923500 -111393265 + AluSg SINE Alu 1 303 -7 1775 157 3 20 chr10 28923503 28923803 -111392962 + AluJo SINE Alu 1 295 -17 200 191 0 0 chr10 28923835 28923877 -111392888 + (TG)n Simple_repeat Simple_repeat 1 42 0 379 337 86 6 chr10 28924261 28924424 -111392341 - MIR3 SINE MIR -3 205 30 23 0 0 0 chr10 28925482 28925505 -111391260 + AT_rich Low_complexity Low_complexity 1 23 0 437 189 75 9 chr10 28926218 28926324 -111390441 - L1MA9 LINE L1 -37 6275 6163 1792 183 10 0 chr10 28926958 28927259 -111389506 - AluSx SINE Alu -8 304 1 994 224 0 0 chr10 28928360 28928525 -111388240 + FAM SINE Alu 1 165 -10 1986 138 0 47 chr10 28928984 28929304 -111387461 + AluJo SINE Alu 1 305 -7 2278 101 0 3 chr10 28930653 28930951 -111385814 + AluSg SINE Alu 1 297 -13 26 50 0 0 chr10 28931740 28931780 -111384985 + AT_rich Low_complexity Low_complexity 1 40 0 2047 130 3 10 chr10 28932117 28932416 -111384349 - AluSx SINE Alu -11 301 5 246 296 127 96 chr10 28933348 28933701 -111383064 + L2 LINE L2 2745 3108 -164 1652 209 88 18 chr10 28934784 28935464 -111381301 - L1MC4 LINE L1 -92 7716 7005 3112 212 40 64 chr10 28935479 28936424 -111380341 - L1MD3 LINE L1 -1 8041 7133 468 180 20 20 chr10 28936472 28936572 -111380193 - L1MC4 LINE L1 -1038 7004 6905 337 138 50 75 chr10 28936584 28936640 -111380125 - L1MC4 LINE L1 -1507 6535 6480 4175 162 57 48 chr10 28936640 28937494 -111379271 - MER6 DNA MER2_type -3 862 1 337 138 50 75 chr10 28937494 28937517 -111379248 - L1MC4 LINE L1 -1562 6480 6458 2319 182 46 116 chr10 28937845 28938503 -111378262 + LTR9 LTR ERV1 1 612 0 591 214 251 35 chr10 28938640 28938759 -111378006 - L1M4 LINE L1 -1489 4657 4565 2163 83 3 21 chr10 28938759 28939070 -111377695 - AluY SINE Alu 0 306 1 591 214 251 35 chr10 28939070 28939464 -111377301 - L1M4 LINE L1 -1581 4565 4032 815 187 22 0 chr10 28939507 28939646 -111377119 - MLT1E1 LTR MaLR 0 654 513 734 203 36 24 chr10 28939653 28940018 -111376747 + LTR9-int LTR ERV1 196 684 -5914 306 159 14 29 chr10 28940377 28940446 -111376319 + LTR9-int LTR ERV1 743 810 -5788 1901 78 19 183 chr10 28941774 28942185 -111374580 - LTR14A LTR ERVK 0 344 1 2134 118 0 0 chr10 28943225 28943512 -111373253 - AluSc SINE Alu -22 287 1 592 214 19 0 chr10 28943520 28943623 -111373142 - FLAM_C SINE Alu -36 107 3 347 328 6 70 chr10 28943791 28943962 -111372803 + MER4A-int LTR ERV1 2549 2708 -4093 264 270 43 60 chr10 28944724 28944909 -111371856 + MER4A-int LTR ERV1 4561 4742 -3014 1207 316 57 44 chr10 28945899 28946925 -111369840 + MER4A-int LTR ERV1 5633 6671 -451 399 41 0 0 chr10 28947283 28947332 -111369433 + (TG)n Simple_repeat Simple_repeat 2 50 0 480 272 72 31 chr10 28947335 28947530 -111369235 + MER4A-int LTR ERV1 6395 6597 -1 2173 123 0 38 chr10 28947536 28947877 -111368888 + MER4A LTR ERV1 1 328 -336 475 72 0 29 chr10 28947968 28948037 -111368728 + MER4A LTR ERV1 356 422 -242 2160 87 7 21 chr10 28948063 28948352 -111368413 + AluSp SINE Alu 13 297 -16 528 175 196 35 chr10 28948373 28948516 -111368249 + MER4C LTR ERV1 300 465 0 770 178 109 83 chr10 28948518 28948794 -111367971 + MER4-int LTR ERV1 1 283 -6315 462 201 120 27 chr10 28948861 28949045 -111367720 + MER4-int LTR ERV1 473 673 -5925 890 168 0 0 chr10 28950896 28951027 -111365738 - FLAM_C SINE Alu -1 132 2 262 196 0 0 chr10 28951151 28951202 -111365563 + MER4A-int LTR ERV1 3104 3154 -1800 8201 20 0 0 chr10 28952364 28953938 -111362827 - L1PA4 LINE L1 -16 6139 4566 568 339 42 58 chr10 28954663 28955330 -111361435 + MER4A-int LTR ERV1 2139 2794 -1853 1359 324 51 37 chr10 28955765 28956782 -111359983 + MER4A-int LTR ERV1 5633 6663 -459 768 196 22 80 chr10 28957149 28957373 -111359392 + MER4A-int LTR ERV1 6385 6595 -3 1999 143 9 59 chr10 28957382 28957778 -111358987 + MER4A LTR ERV1 1 224 -241 298 218 0 0 chr10 28958035 28958090 -111358675 + MER4-int LTR ERV1 750 804 -5794 2732 159 16 26 chr10 28958190 28958643 -111358122 + MER83 LTR ERV1 1 448 0 2401 63 10 0 chr10 28960548 28960851 -111355914 - AluY SINE Alu -5 306 1 1955 121 0 17 chr10 28961308 28961623 -111355142 - AluSx SINE Alu 0 310 1 180 0 26 79 chr10 28961835 28961873 -111354892 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28962774 28962849 -111353916 - LTR40a LTR ERVL 0 519 440 345 305 49 59 chr10 28962853 28963056 -111353709 + LTR40a LTR ERVL 209 409 -110 297 293 0 0 chr10 28963054 28963112 -111353653 - LTR40a LTR ERVL -222 297 240 * 356 216 196 61 chr10 28963193 28963277 -111353488 - LTR40a LTR ERVL -351 168 97 2422 90 0 0 chr10 28963277 28963577 -111353188 + AluSx SINE Alu 1 300 -12 356 216 196 61 chr10 28963577 28963640 -111353125 - LTR40a LTR ERVL -422 97 1 334 0 43 0 chr10 28963903 28963949 -111352816 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1832 136 4 4 chr10 28963960 28964232 -111352533 - AluSx SINE Alu -40 272 1 1541 176 46 40 chr10 28964265 28964567 -111352198 + AluJo SINE Alu 1 304 -8 377 282 86 21 chr10 28964762 28964996 -111351769 + L1MEc LINE L1 1390 1604 -4780 310 281 45 0 chr10 28965702 28965791 -111350974 + L1 LINE L1 4739 4831 -1315 1677 157 10 33 chr10 28966717 28967022 -111349743 - AluJo SINE Alu -14 298 1 414 185 0 0 chr10 28967508 28967589 -111349176 - AluS SINE Alu -4 306 226 274 180 101 34 chr10 28967629 28967718 -111349047 + L1P LINE L1 3878 3972 -2174 1669 225 33 110 chr10 28967784 28968383 -111348382 - MER74A LTR ERVL -5 553 1 1891 158 66 64 chr10 28968789 28969227 -111347538 + Tigger6a DNA MER2_type 38 476 -607 2391 147 59 17 chr10 28969338 28969713 -111347052 - MSTB LTR MaLR 0 426 31 1865 141 75 36 chr10 28969713 28970074 -111346691 - THE1C LTR MaLR 0 375 1 2391 147 59 17 chr10 28970074 28970107 -111346658 - MSTB LTR MaLR -395 31 1 354 199 17 152 chr10 28970116 28970347 -111346418 + L1MC5 LINE L1 7382 7581 -380 2034 111 0 0 chr10 28970349 28970620 -111346145 + AluSg1 SINE Alu 1 271 -38 198 91 0 0 chr10 28970629 28970662 -111346103 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2193 89 0 24 chr10 28970951 28971242 -111345523 - AluSq SINE Alu -23 290 7 1349 188 12 0 chr10 28971748 28971993 -111344772 + AluSx SINE Alu 36 283 -29 336 24 0 0 chr10 28974157 28974198 -111342567 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 394 284 165 17 chr10 28974479 28974655 -111342110 + MIR SINE MIR 24 225 -37 204 300 17 42 chr10 28974630 28974750 -111342015 + MIR SINE MIR 134 250 -12 * 744 200 0 0 chr10 28976451 28976576 -111340189 - AluJb SINE Alu -186 126 2 209 356 35 17 chr10 28977000 28977115 -111339650 + MIR SINE MIR 24 140 -122 187 368 61 0 chr10 28979099 28979213 -111337552 - MIR SINE MIR -62 200 80 2841 298 47 36 chr10 28980567 28982170 -111334595 + L1PBa LINE L1 3 1623 -5240 * 5155 160 62 30 chr10 28982151 28983427 -111333338 + L1PBb LINE L1 1 1325 -4879 1957 125 24 20 chr10 28983427 28983722 -111333043 + AluSx SINE Alu 1 296 -16 5155 160 62 30 chr10 28983722 28983847 -111332918 + L1PBb LINE L1 1325 1445 -4759 3544 232 43 32 chr10 28983875 28985278 -111331487 + L1PBb LINE L1 1807 3268 -2935 2442 98 0 6 chr10 28985278 28985593 -111331172 - AluSq SINE Alu 0 313 1 3544 232 43 32 chr10 28985593 28985613 -111331152 + L1PBb LINE L1 3268 3286 -2917 484 222 0 9 chr10 28985839 28985947 -111330818 - MER104 DNA Tc2 -71 109 3 1928 158 7 3 chr10 28985961 28986258 -111330507 - AluJo SINE Alu -14 298 1 608 251 101 31 chr10 28986348 28986575 -111330190 - MIR SINE MIR 0 262 20 2230 105 20 80 chr10 28986689 28987088 -111329677 - THE1C LTR MaLR 0 375 1 2207 107 0 20 chr10 28987877 28988177 -111328588 - AluSx SINE Alu -18 294 1 2120 119 3 3 chr10 28988979 28989272 -111327493 - AluSg SINE Alu -17 293 1 252 302 0 31 chr10 28989612 28989708 -111327057 + MIR SINE MIR 14 106 -156 997 149 0 0 chr10 29039882 29040030 -111276735 + AluJb SINE Alu 149 296 -16 1876 107 16 0 chr10 29040069 29040322 -111276443 + AluSx SINE Alu 30 286 -26 1459 167 58 12 chr10 29040616 29040874 -111275891 + AluJb SINE Alu 11 280 -32 2173 84 32 3 chr10 29042650 29042934 -111273831 + AluSq SINE Alu 1 292 -21 2112 120 7 23 chr10 29043396 29043697 -111273068 + AluSx SINE Alu 1 296 -16 1924 125 14 4 chr10 29045526 29045848 -111270917 - AluSq SINE Alu 0 325 1 2532 79 0 0 chr10 29045937 29046241 -111270524 - AluSc SINE Alu -4 305 2 2142 82 43 0 chr10 29046500 29046781 -111269984 + AluSp SINE Alu 2 294 -19 2308 113 6 0 chr10 29047688 29047999 -111268766 - AluSq SINE Alu 0 313 1 216 97 0 0 chr10 29048250 29048281 -111268484 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 449 17 0 17 chr10 29048292 29048351 -111268414 + (TG)n Simple_repeat Simple_repeat 2 59 0 1570 117 13 9 chr10 29048397 29048627 -111268138 + AluSg/x SINE Alu 73 303 -7 366 96 0 0 chr10 29048627 29048679 -111268086 - U2 snRNA snRNA -136 52 1 421 281 46 32 chr10 29048871 29049088 -111267677 + MLT1J LTR MaLR 292 511 0 2332 86 3 10 chr10 29049147 29049451 -111267314 + AluSp SINE Alu 1 302 -11 2056 120 0 3 chr10 29049507 29049829 -111266936 + AluSx SINE Alu 1 321 0 2406 72 0 0 chr10 29049894 29050187 -111266578 + AluSc SINE Alu 1 293 -16 2247 97 10 0 chr10 29051099 29051389 -111265376 + AluSp SINE Alu 1 293 -20 239 240 132 66 chr10 29051604 29051725 -111265040 - MIR SINE MIR -77 185 57 29 47 0 0 chr10 29052194 29052237 -111264528 + AT_rich Low_complexity Low_complexity 1 43 0 1781 147 56 3 chr10 29052824 29053109 -111263656 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 29053120 29053141 -111263624 + AT_rich Low_complexity Low_complexity 1 21 0 369 301 30 38 chr10 29053304 29053437 -111263328 - L2 LINE L2 -4 3268 3137 2161 110 7 0 chr10 29054008 29054317 -111262448 + AluY SINE Alu 1 311 0 1115 121 0 12 chr10 29054367 29054533 -111262232 - AluSg/x SINE Alu -12 298 135 1380 128 92 12 chr10 29054936 29055187 -111261578 + AluY SINE Alu 33 303 -8 3748 67 69 4 chr10 29055218 29055615 -111261150 + MER41A LTR ERV1 1 441 -113 2253 99 0 43 chr10 29055615 29055937 -111260828 - AluSx SINE Alu -4 308 1 3748 67 69 4 chr10 29055937 29056059 -111260706 + MER41A LTR ERV1 441 554 0 1490 193 37 3 chr10 29056070 29056365 -111260400 + AluJo SINE Alu 1 305 -7 1915 119 0 0 chr10 29056704 29056957 -111259808 + AluSx SINE Alu 5 257 -55 326 159 0 63 chr10 29057112 29057175 -111259590 - L2 LINE L2 0 3313 3255 1778 143 16 48 chr10 29058149 29058464 -111258301 - AluJo SINE Alu -6 306 2 2326 107 0 7 chr10 29058640 29058948 -111257817 + AluSq SINE Alu 5 310 -3 751 132 0 9 chr10 29058998 29059112 -111257653 - FLAM_C SINE Alu -25 118 6 926 174 17 6 chr10 29059162 29059334 -111257431 + FAM SINE Alu 2 175 0 2566 62 0 0 chr10 29060025 29060334 -111256431 + AluY SINE Alu 1 309 -2 843 171 185 38 chr10 29060798 29061009 -111255756 - AluSx SINE Alu -70 242 1 1355 176 77 15 chr10 29061107 29061380 -111255385 - AluJo SINE Alu -22 290 1 22 56 0 0 chr10 29061470 29061506 -111255259 + AT_rich Low_complexity Low_complexity 1 36 0 1338 167 13 9 chr10 29061519 29061747 -111255018 + AluJb SINE Alu 3 231 -81 1688 124 8 4 chr10 29061887 29062146 -111254619 - AluY SINE Alu -51 260 1 467 17 0 0 chr10 29062166 29062224 -111254541 - MER41A LTR ERV1 -97 457 400 2181 91 17 3 chr10 29062287 29062584 -111254181 + AluSx SINE Alu 1 301 -11 322 283 53 44 chr10 29062586 29062699 -111254066 + MIR3 SINE MIR 41 154 -54 285 350 29 19 chr10 29063032 29063135 -111253630 + MIR SINE MIR 2 105 -157 182 226 0 0 chr10 29063157 29063188 -111253577 + L2 LINE L2 3264 3294 -19 769 325 77 31 chr10 29063298 29063689 -111253076 - L2 LINE L2 -1 3312 2904 2108 233 113 30 chr10 29063691 29063816 -111252949 - L2 LINE L2 -781 2533 2420 2136 99 27 3 chr10 29063816 29064109 -111252656 - AluSq SINE Alu -13 300 1 2108 233 113 30 chr10 29064109 29064709 -111252056 - L2 LINE L2 -894 2420 1748 251 270 230 11 chr10 29064777 29064951 -111251814 - L2 LINE L2 -1921 1393 1182 347 278 41 0 chr10 29065073 29065170 -111251595 + L3 LINE CR1 1460 1560 -17 1291 133 0 0 chr10 29065573 29065753 -111251012 - AluJ SINE Alu -4 308 129 1687 183 0 13 chr10 29065761 29066062 -111250703 - AluJo SINE Alu -15 297 1 731 169 0 8 chr10 29066111 29066229 -111250536 - AluJ SINE Alu -192 120 4 1372 215 129 22 chr10 29066817 29067305 -111249460 - L1ME3A LINE L1 0 6170 5631 284 200 56 11 chr10 29068173 29068263 -111248502 - L1MC4 LINE L1 -6 8036 7943 1441 175 57 0 chr10 29068278 29068524 -111248241 - AluJb SINE Alu -52 260 1 30 27 0 0 chr10 29068563 29068600 -111248165 + AT_rich Low_complexity Low_complexity 1 37 0 380 209 173 0 chr10 29068600 29068710 -111248055 - L1MC4 LINE L1 -147 7895 7767 617 151 0 0 chr10 29068710 29068803 -111247962 + AluSx SINE Alu 3 95 -217 1642 99 14 5 chr10 29068820 29069043 -111247722 + AluSx SINE Alu 72 296 -14 496 188 34 172 chr10 29069051 29069376 -111247389 - L1MC4 LINE L1 -273 7769 7490 * 583 213 71 36 chr10 29069375 29069600 -111247165 - L1ME4a LINE L1 -295 5826 5594 361 256 35 81 chr10 29069716 29069888 -111246877 + L1MC4a LINE L1 7294 7457 -351 395 305 62 9 chr10 29070287 29070513 -111246252 - L1MC4 LINE L1 -15 8027 7790 27 29 0 0 chr10 29070885 29070919 -111245846 + AT_rich Low_complexity Low_complexity 1 34 0 866 153 0 0 chr10 29072510 29072641 -111244124 + AluJo SINE Alu 1 131 -181 1971 140 39 0 chr10 29072647 29072932 -111243833 + AluSx SINE Alu 3 298 -14 933 220 23 0 chr10 29072977 29073154 -111243611 + AluJo SINE Alu 118 298 -14 1281 162 165 13 chr10 29073319 29073622 -111243143 + L1MB7 LINE L1 5823 6171 -13 2234 118 0 3 chr10 29074847 29075152 -111241613 - AluSq SINE Alu -7 306 3 1637 179 24 30 chr10 29076091 29076388 -111240377 + AluJo SINE Alu 1 295 -17 537 230 0 0 chr10 29076406 29076506 -111240259 + FRAM SINE Alu 1 100 -76 1007 127 63 39 chr10 29076565 29076770 -111239995 + MER2 DNA MER2_type 1 210 -135 244 282 28 0 chr10 29076798 29076869 -111239896 + MER2 DNA MER2_type 273 345 0 2117 106 0 0 chr10 29077121 29077395 -111239370 - AluSx SINE Alu -38 274 1 841 149 0 15 chr10 29077801 29077935 -111238830 - FLAM_C SINE Alu -1 132 1 258 200 12 47 chr10 29077937 29077985 -111238780 + T-rich Low_complexity Low_complexity 1 46 -36 2080 151 3 0 chr10 29077985 29078296 -111238469 - AluSp SINE Alu -1 312 1 258 200 12 47 chr10 29078296 29078332 -111238433 + T-rich Low_complexity Low_complexity 46 82 0 2365 94 0 0 chr10 29078817 29079116 -111237649 + AluSx SINE Alu 1 299 -13 378 207 63 9 chr10 29079217 29079328 -111237437 + Charlie7 DNA MER1_type 2465 2581 -31 738 163 0 37 chr10 29079353 29079488 -111237277 - FLAM_C SINE Alu -3 130 1 2026 110 46 0 chr10 29079602 29079884 -111236881 - AluSx SINE Alu -17 295 1 811 301 106 3 chr10 29079945 29080304 -111236461 - L1ME4a LINE L1 -114 6007 5612 339 186 0 43 chr10 29080671 29080740 -111236025 + AluJo SINE Alu 78 142 -160 2282 73 11 7 chr10 29080740 29081026 -111235739 + AluSx SINE Alu 1 287 -25 2174 109 0 3 chr10 29081579 29081881 -111234884 - AluSc SINE Alu -8 301 1 360 151 15 9 chr10 29081972 29082053 -111234712 - MER41A LTR ERV1 -88 466 388 227 332 161 16 chr10 29082137 29082330 -111234435 - L2 LINE L2 -225 3047 2827 1548 170 4 4 chr10 29082330 29082583 -111234182 + AluSx SINE Alu 1 253 -59 1634 155 0 4 chr10 29082728 29082973 -111233792 + AluSx SINE Alu 11 254 -58 1431 160 115 4 chr10 29083232 29083501 -111233264 - AluJb SINE Alu -13 299 1 1462 105 12 17 chr10 29083775 29084128 -111232637 + L1MA3 LINE L1 5254 5607 -698 2321 88 3 0 chr10 29084128 29084424 -111232341 + AluSp SINE Alu 1 297 -16 1462 105 12 17 chr10 29084424 29085024 -111231741 + L1MA3 LINE L1 5607 6287 -18 626 156 73 9 chr10 29085050 29085159 -111231606 - FLAM_C SINE Alu -17 116 1 37 0 0 0 chr10 29085189 29085226 -111231539 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 29085416 29085533 -111231232 + AluJo/FLAM SINE Alu 2 118 -194 2225 133 0 0 chr10 29085533 29085841 -111230924 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 29085935 29085971 -111230794 + AT_rich Low_complexity Low_complexity 1 36 0 2195 110 0 13 chr10 29086350 29086518 -111230247 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 29086518 29086794 -111229971 - AluSp SINE Alu -5 308 32 2234 101 3 3 chr10 29086794 29087092 -111229673 - AluSx SINE Alu -14 298 1 2195 110 0 13 chr10 29087092 29087222 -111229543 - AluSx SINE Alu -178 134 6 442 318 112 40 chr10 29088069 29088443 -111228322 + L2 LINE L2 255 655 -2659 1105 160 55 10 chr10 29088451 29088651 -111228114 - AluJb SINE Alu -21 291 83 2096 145 7 0 chr10 29088674 29088984 -111227781 + AluJb SINE Alu 1 312 0 2454 93 0 3 chr10 29089117 29089430 -111227335 + AluSq SINE Alu 1 312 -1 684 175 114 0 chr10 29089450 29089564 -111227201 + FLAM_A SINE Alu 1 127 -6 564 114 38 0 chr10 29089616 29089695 -111227070 + AluSg/x SINE Alu 217 298 -14 24 32 0 0 chr10 29089784 29089815 -111226950 + AT_rich Low_complexity Low_complexity 1 31 0 893 102 14 54 chr10 29089817 29089964 -111226801 - L1PB3 LINE L1 -3 6151 6011 1107 143 6 0 chr10 29090473 29090641 -111226124 + AluSx SINE Alu 1 169 -143 2063 139 0 0 chr10 29090805 29091100 -111225665 + AluSx SINE Alu 1 295 -17 1878 179 68 46 chr10 29091187 29091644 -111225121 - MLT1C LTR MaLR 0 467 1 2273 82 3 0 chr10 29091899 29092212 -111224553 - AluSp SINE Alu 0 314 1 243 235 59 0 chr10 29092214 29092282 -111224483 + L2 LINE L2 1872 1943 -1371 233 312 197 45 chr10 29092330 29092545 -111224220 + L2 LINE L2 2138 2319 -995 2412 96 0 0 chr10 29092545 29092847 -111223918 + AluSx SINE Alu 1 302 -10 233 312 197 45 chr10 29092847 29093189 -111223576 + L2 LINE L2 2319 2780 -534 2099 125 6 13 chr10 29093565 29093876 -111222889 - AluSg1 SINE Alu 0 309 1 193 362 142 16 chr10 29094340 29094467 -111222298 + L2 LINE L2 3112 3254 -18 2201 113 0 13 chr10 29094839 29095141 -111221624 + AluSx SINE Alu 1 298 -14 2352 97 0 10 chr10 29096002 29096313 -111220452 + AluY SINE Alu 1 308 -3 2646 163 27 29 chr10 29096848 29097105 -111219660 - MER83 LTR ERV1 0 448 190 2150 110 0 0 chr10 29097105 29097416 -111219349 - AluSx SINE Alu 0 311 1 2646 163 27 29 chr10 29097416 29097606 -111219159 - MER83 LTR ERV1 -258 190 1 2278 95 0 20 chr10 29097827 29098131 -111218634 + AluSq SINE Alu 1 298 -15 2123 91 14 17 chr10 29098383 29098517 -111218248 + AluSg SINE Alu 1 134 -176 2299 101 0 3 chr10 29098517 29098824 -111217941 + AluY SINE Alu 1 306 -5 2123 91 14 17 chr10 29098824 29098985 -111217780 + AluSg SINE Alu 134 295 -15 1666 177 14 0 chr10 29099192 29099474 -111217291 + AluJb SINE Alu 5 290 -22 832 156 8 8 chr10 29099542 29099670 -111217095 - FLAM_C SINE Alu -5 128 1 2011 74 0 19 chr10 29099992 29100279 -111216486 - AluSc SINE Alu 0 308 27 1926 149 19 13 chr10 29100426 29100734 -111216031 - AluJo SINE Alu -2 310 1 989 250 59 34 chr10 29100744 29101068 -111215697 - L2 LINE L2 0 3313 2982 2383 88 0 0 chr10 29101277 29101571 -111215194 - AluSx SINE Alu -6 306 13 2179 92 49 0 chr10 29102078 29102362 -111214403 + AluSx SINE Alu 5 302 -10 999 174 6 0 chr10 29102362 29102523 -111214242 + AluSg/x SINE Alu 134 295 -17 2309 83 3 0 chr10 29102532 29102821 -111213944 + AluSx SINE Alu 2 291 -21 2132 110 0 0 chr10 29103743 29104034 -111212731 + AluSg SINE Alu 1 291 -19 2107 142 0 0 chr10 29104193 29104489 -111212276 + AluSx SINE Alu 1 296 -16 595 221 18 90 chr10 29105632 29105953 -111210812 + MER34B LTR ERV1 5 360 -205 733 83 10 0 chr10 29105953 29106049 -111210716 - AluSg SINE Alu -213 97 1 762 179 0 0 chr10 29106083 29106200 -111210565 + FLAM_C SINE Alu 2 118 -25 26 0 0 27 chr10 29106202 29106214 -111210551 + AT_rich Low_complexity Low_complexity 1 12 -24 2548 21 21 0 chr10 29106214 29106494 -111210271 + L1PA5 LINE L1 5861 6146 -8 26 0 0 27 chr10 29106494 29106518 -111210247 + AT_rich Low_complexity Low_complexity 12 36 0 24 24 0 24 chr10 29106697 29106726 -111210039 + AT_rich Low_complexity Low_complexity 1 30 -11 2190 121 0 0 chr10 29106726 29107016 -111209749 + AluSx SINE Alu 1 290 -22 24 24 0 24 chr10 29107016 29107028 -111209737 + AT_rich Low_complexity Low_complexity 30 41 0 542 323 113 5 chr10 29107425 29107747 -111209018 - L2 LINE L2 -617 2697 2284 241 143 24 0 chr10 29107764 29107806 -111208959 + MLT1F1 LTR MaLR 17 59 -508 2547 156 96 19 chr10 29107806 29108325 -111208440 + L1MC1 LINE L1 5768 6326 -7 1970 132 0 14 chr10 29108325 29108621 -111208144 + AluSq SINE Alu 1 292 -21 1084 174 126 30 chr10 29108638 29108971 -111207794 + L1 LINE L1 3049 3413 -2733 24 32 0 0 chr10 29109007 29109038 -111207727 + AT_rich Low_complexity Low_complexity 1 31 0 310 216 150 65 chr10 29109074 29109227 -111207538 - MLT1K LTR MaLR -302 286 121 2209 89 3 10 chr10 29109413 29109704 -111207061 + AluSg SINE Alu 1 289 -21 417 239 28 0 chr10 29110221 29110330 -111206435 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 29110424 29110549 -111206216 - L1ME1 LINE L1 -5 6161 6016 1239 187 85 30 chr10 29110560 29110891 -111205874 - L1ME1 LINE L1 -582 5602 5254 2448 56 3 16 chr10 29110910 29111214 -111205551 - AluY SINE Alu -11 300 1 181 299 0 30 chr10 29111482 29111549 -111205216 - L2 LINE L2 -7 3265 3201 886 149 0 0 chr10 29111706 29111827 -111204938 + FLAM_C SINE Alu 1 121 -12 21 0 0 0 chr10 29111829 29111850 -111204915 + AT_rich Low_complexity Low_complexity 1 21 0 326 156 32 50 chr10 29111931 29112011 -111204754 - LTR41 LTR ERVL 0 523 440 857 174 12 124 chr10 29112022 29112165 -111204600 + AluJo SINE Alu 6 163 -149 2178 92 6 48 chr10 29112165 29112480 -111204285 + AluSx SINE Alu 2 303 -9 2217 119 0 7 chr10 29112490 29112792 -111203973 + AluSx SINE Alu 3 302 -10 857 174 12 124 chr10 29112792 29112879 -111203886 + AluJo SINE Alu 173 220 -92 2391 85 3 0 chr10 29112910 29113204 -111203561 + AluSg SINE Alu 1 295 -15 306 250 176 27 chr10 29113807 29114036 -111202729 + LTR41 LTR ERVL 510 795 0 1547 127 130 16 chr10 29114204 29114457 -111202308 + AluSg SINE Alu 14 295 -15 527 144 29 0 chr10 29115123 29115262 -111201503 + (TA)n Simple_repeat Simple_repeat 2 144 0 2080 134 3 7 chr10 29115379 29115686 -111201079 + AluSx SINE Alu 1 306 -6 1089 228 134 55 chr10 29116038 29116820 -111199945 + L1ME LINE L1 1107 1940 -4706 1787 171 7 0 chr10 29116861 29117187 -111199578 - AluSx SINE Alu 0 328 1 419 208 54 13 chr10 29117196 29117377 -111199388 + L1ME LINE L1 2525 2755 -3931 2431 70 0 16 chr10 29117377 29117691 -111199074 + AluY SINE Alu 1 309 -2 2301 72 10 13 chr10 29117701 29118007 -111198758 + AluY SINE Alu 1 305 -6 25 0 0 0 chr10 29118630 29118655 -111198110 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr10 29119068 29119115 -111197650 + (TG)n Simple_repeat Simple_repeat 2 48 0 1726 104 100 4 chr10 29119321 29119603 -111197162 - AluSq SINE Alu 0 307 1 2398 86 3 0 chr10 29119940 29120243 -111196522 + AluSg SINE Alu 1 304 -6 1972 122 27 20 chr10 29120412 29120707 -111196058 + AluSx SINE Alu 1 297 -15 1283 217 112 0 chr10 29121249 29121507 -111195258 + AluJo SINE Alu 1 287 -15 195 167 0 0 chr10 29121509 29121551 -111195214 + (TATG)n Simple_repeat Simple_repeat 3 44 0 314 333 175 4 chr10 29121597 29121820 -111194945 + L1ME LINE L1 4226 4480 -2164 386 297 126 50 chr10 29121883 29122398 -111194367 + L1ME LINE L1 4603 5156 -1488 674 292 120 47 chr10 29122926 29123392 -111193373 + L1ME LINE L1 5816 6315 -304 795 111 21 175 chr10 29123781 29124017 -111192748 + AluSp SINE Alu 124 330 0 749 130 19 0 chr10 29124077 29124185 -111192580 + FLAM_C SINE Alu 16 125 -18 456 358 121 9 chr10 29124636 29124966 -111191799 + L2 LINE L2 2365 2731 -583 182 417 12 0 chr10 29125330 29125414 -111191351 + L2 LINE L2 3186 3270 -2 1723 205 30 0 chr10 29126112 29126415 -111190350 - AluJb SINE Alu 0 312 1 22 0 0 0 chr10 29126853 29126875 -111189890 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 29126896 29126924 -111189841 + AT_rich Low_complexity Low_complexity 1 28 0 226 296 40 19 chr10 29127625 29127768 -111188997 + MER5A DNA MER1_type 1 183 -6 21 0 0 31 chr10 29127857 29127868 -111188897 + AT_rich Low_complexity Low_complexity 1 11 -20 2135 116 7 3 chr10 29127868 29128178 -111188587 - AluY SINE Alu 0 311 1 21 0 0 31 chr10 29128178 29128198 -111188567 + AT_rich Low_complexity Low_complexity 11 31 0 500 17 0 0 chr10 29128199 29128257 -111188508 - MER41B LTR ERV1 -97 538 481 1307 90 6 0 chr10 29128361 29128547 -111188218 + AluSp SINE Alu 118 304 0 2305 70 7 10 chr10 29128574 29128873 -111187892 + AluY SINE Alu 1 298 -13 993 107 75 164 chr10 29129879 29130022 -111186743 + L1MD3 LINE L1 7730 7837 -158 2392 67 0 0 chr10 29130022 29130307 -111186458 + AluY SINE Alu 7 291 -20 993 107 75 164 chr10 29130307 29130444 -111186321 + L1MD3 LINE L1 7837 7985 -10 25 0 0 0 chr10 29130862 29130887 -111185878 + AT_rich Low_complexity Low_complexity 1 25 0 1214 200 55 4 chr10 29131651 29131886 -111184879 + AluJo SINE Alu 46 292 -20 820 179 0 8 chr10 29132368 29132502 -111184263 + AluJo SINE Alu 2 134 -178 1776 236 167 24 chr10 29132686 29133278 -111183487 + LTR41 LTR ERVL 1 677 -96 1535 142 9 9 chr10 29133351 29133603 -111183162 - AluSx SINE Alu 0 312 58 2182 149 43 19 chr10 29133607 29134035 -111182730 + Tigger2 DNA MER2_type 13 2718 0 452 302 54 34 chr10 29134343 29134602 -111182163 + L1ME LINE L1 5519 5786 -335 2024 153 3 10 chr10 29134602 29134915 -111181850 + AluSx SINE Alu 1 311 -1 452 302 54 34 chr10 29134915 29134950 -111181815 + L1ME LINE L1 5786 5819 -302 2101 115 3 28 chr10 29134967 29135288 -111181477 + AluSq SINE Alu 1 313 0 622 155 31 0 chr10 29135288 29135385 -111181380 + AluJo/FRAM SINE Alu 197 296 -16 262 284 43 17 chr10 29135418 29135534 -111181231 - MIR SINE MIR -11 251 133 3783 119 38 35 chr10 29135537 29136095 -111180670 + MER41B LTR ERV1 1 563 -72 2257 97 10 0 chr10 29136095 29136395 -111180370 - AluY SINE Alu -7 304 2 3783 119 38 35 chr10 29136395 29136467 -111180298 + MER41B LTR ERV1 563 633 -2 516 179 1 120 chr10 29136474 29136624 -111180141 + MSTD LTR MaLR 13 145 -251 2601 42 0 7 chr10 29136778 29137085 -111179680 + AluY SINE Alu 5 309 -2 549 324 96 10 chr10 29138019 29138355 -111178410 + L2 LINE L2 2644 3008 -264 1350 73 6 0 chr10 29139737 29139914 -111176851 - AluSq SINE Alu -5 308 131 21 0 0 0 chr10 29140469 29140490 -111176275 + GC_rich Low_complexity Low_complexity 1 21 0 254 297 59 10 chr10 29141056 29141157 -111175608 - MIR SINE MIR -72 136 31 2235 66 0 62 chr10 29141177 29141497 -111175268 - AluY SINE Alu -10 301 2 1841 107 7 65 chr10 29141685 29141994 -111174771 - AluSx SINE Alu -21 291 1 1986 77 110 4 chr10 29142004 29142277 -111174488 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 29142800 29142838 -111173927 + AT_rich Low_complexity Low_complexity 1 38 0 1372 191 58 7 chr10 29143412 29143689 -111173076 + AluJo SINE Alu 1 291 -21 304 163 0 0 chr10 29143999 29144048 -111172717 - MLT2C2 LTR ERVL 0 464 416 810 193 0 37 chr10 29144091 29144252 -111172513 + AluJo SINE Alu 1 155 -157 1655 130 20 80 chr10 29144296 29144597 -111172168 - AluSx SINE Alu -29 283 1 1429 178 36 46 chr10 29145164 29145467 -111171298 - AluJb SINE Alu -8 304 5 2414 106 0 0 chr10 29145643 29145955 -111170810 + AluSq SINE Alu 1 312 -1 2200 102 3 3 chr10 29146400 29146695 -111170070 + AluSq SINE Alu 1 295 -18 30 0 0 0 chr10 29146702 29146732 -111170033 + AT_rich Low_complexity Low_complexity 1 30 0 430 342 78 22 chr10 29147075 29147522 -111169243 + L1MC/D LINE L1 5301 5772 -2036 2174 113 0 20 chr10 29147555 29147857 -111168908 + AluSx SINE Alu 1 296 -16 351 245 74 64 chr10 29147974 29148087 -111168678 + MER46C DNA MER2_type 1 111 -227 2281 99 3 3 chr10 29148087 29148391 -111168374 - AluSq SINE Alu -9 304 1 351 245 74 64 chr10 29148391 29148520 -111168245 + MER46C DNA MER2_type 111 293 -45 2319 97 0 26 chr10 29148793 29149104 -111167661 - AluY SINE Alu -8 303 1 1037 145 0 41 chr10 29149114 29149286 -111167479 - AluSg/x SINE Alu -18 292 128 1709 170 21 7 chr10 29149322 29149611 -111167154 - AluJo SINE Alu -17 295 3 2166 108 0 0 chr10 29149825 29150112 -111166653 - AluSx SINE Alu -25 287 1 319 193 20 29 chr10 29150719 29150792 -111165973 + AluJ/FLAM SINE Alu 1 57 -245 600 86 0 37 chr10 29150792 29150873 -111165892 - AluSg/x SINE Alu -17 295 218 37 0 0 0 chr10 29151001 29151038 -111165727 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 29151228 29151345 -111165420 + AluJo/FLAM SINE Alu 2 118 -194 2241 130 0 0 chr10 29151345 29151653 -111165112 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 29151747 29151783 -111164982 + AT_rich Low_complexity Low_complexity 1 36 0 2247 105 0 13 chr10 29152162 29152330 -111164435 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 29152330 29152606 -111164159 - AluSp SINE Alu -5 308 32 2236 104 3 3 chr10 29152606 29152904 -111163861 - AluSx SINE Alu -14 298 1 2247 105 0 13 chr10 29152904 29153039 -111163726 - AluSx SINE Alu -178 134 1 2481 57 3 3 chr10 29153328 29153629 -111163136 + AluY SINE Alu 1 301 -10 2419 96 0 0 chr10 29153639 29153951 -111162814 + AluSx SINE Alu 1 312 0 1603 159 36 0 chr10 29154009 29154261 -111162504 + AluJo SINE Alu 13 273 -39 2318 98 0 3 chr10 29155053 29155350 -111161415 - AluSx SINE Alu -16 296 1 1952 147 0 16 chr10 29155607 29155914 -111160851 + AluSx SINE Alu 1 302 -10 35 71 0 0 chr10 29156515 29156585 -111160180 + AT_rich Low_complexity Low_complexity 1 70 0 333 308 173 0 chr10 29157010 29157166 -111159599 - MER5A DNA MER1_type 0 189 7 1084 175 28 5 chr10 29157166 29157383 -111159382 + L1MC/D LINE L1 4523 4744 -1402 577 250 78 0 chr10 29157506 29157698 -111159067 + L1MC/D LINE L1 5574 5780 -2028 965 249 19 83 chr10 29157699 29158060 -111158705 - MER46C DNA MER2_type 0 338 1 1796 185 0 13 chr10 29158219 29158533 -111158232 + AluSx SINE Alu 1 310 -2 2115 137 0 3 chr10 29159143 29159456 -111157309 - AluSx SINE Alu 0 312 1 1747 160 3 32 chr10 29160205 29160518 -111156247 + AluJb SINE Alu 1 304 -8 1843 144 0 47 chr10 29160671 29160991 -111155774 + AluJo SINE Alu 7 311 -1 257 311 9 9 chr10 29161200 29161306 -111155459 + L1MC/D LINE L1 5739 5844 -1964 2278 103 0 0 chr10 29161332 29161624 -111155141 + AluSx SINE Alu 1 292 -20 694 164 0 25 chr10 29161657 29161779 -111154986 - AluSg/x SINE Alu -10 299 181 468 154 0 0 chr10 29161800 29161865 -111154900 - AluS SINE Alu -246 66 2 22 0 0 0 chr10 29162212 29162234 -111154531 + AT_rich Low_complexity Low_complexity 1 22 0 944 158 19 0 chr10 29162733 29162891 -111153874 - L1PA16 LINE L1 -2 6164 6004 336 64 0 0 chr10 29163033 29163080 -111153685 + (CA)n Simple_repeat Simple_repeat 2 48 0 1421 100 28 104 chr10 29163136 29163217 -111153548 - MER30 DNA MER1_type 0 230 144 1981 121 0 57 chr10 29163217 29163548 -111153217 - AluSx SINE Alu 0 312 1 1421 100 28 104 chr10 29163548 29163715 -111153050 - MER30 DNA MER1_type -86 144 1 207 0 0 0 chr10 29164287 29164310 -111152455 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 113 3 3 chr10 29164312 29164595 -111152170 - AluSx SINE Alu -29 283 1 400 220 9 46 chr10 29164650 29164759 -111152006 - MER5B DNA MER1_type -68 110 6 2124 112 0 10 chr10 29164877 29165173 -111151592 + AluSg SINE Alu 1 293 -17 351 0 0 0 chr10 29165375 29165414 -111151351 + (TA)n Simple_repeat Simple_repeat 2 40 0 2354 88 0 10 chr10 29165414 29165720 -111151045 - AluSx SINE Alu -8 304 2 375 110 0 18 chr10 29165905 29166160 -111150605 + AluSx SINE Alu 1 298 -4 2238 117 0 0 chr10 29167115 29167413 -111149352 + AluSx SINE Alu 2 299 -13 2138 139 0 0 chr10 29167834 29168136 -111148629 + AluSx SINE Alu 1 302 -10 240 86 29 0 chr10 29168754 29168789 -111147976 + U2 snRNA snRNA 1 36 -152 453 69 17 0 chr10 29168857 29168915 -111147850 - U7 snRNA snRNA -3 60 2 2228 116 7 0 chr10 29168925 29169226 -111147539 - AluSx SINE Alu -9 303 1 27 73 0 0 chr10 29169522 29169577 -111147188 + AT_rich Low_complexity Low_complexity 1 55 0 2344 100 3 0 chr10 29169744 29170045 -111146720 + AluSx SINE Alu 1 302 -10 1478 171 47 7 chr10 29170052 29170327 -111146438 + AluJb SINE Alu 6 291 -21 2361 81 3 13 chr10 29170358 29170666 -111146099 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr10 29171089 29171110 -111145655 + AT_rich Low_complexity Low_complexity 1 21 0 2284 108 0 0 chr10 29171249 29171556 -111145209 + AluSx SINE Alu 1 307 -5 1936 133 7 10 chr10 29172430 29172731 -111144034 + AluJb SINE Alu 1 300 -12 256 269 86 47 chr10 29172760 29172994 -111143771 + L1ME4a LINE L1 5704 5946 -175 2193 110 13 0 chr10 29173205 29173505 -111143260 + AluSx SINE Alu 1 304 -8 2189 113 20 0 chr10 29174221 29174514 -111142251 - AluSq SINE Alu -14 299 1 2063 50 25 109 chr10 29174526 29174876 -111141889 - AluY SINE Alu 0 311 1 2167 105 3 0 chr10 29175515 29175809 -111140956 + AluSp SINE Alu 1 295 -18 427 249 144 22 chr10 29175893 29176137 -111140628 + L1MDa LINE L1 1552 1867 -4730 22 0 0 0 chr10 29176191 29176213 -111140552 + AT_rich Low_complexity Low_complexity 1 22 0 2213 85 0 3 chr10 29176337 29176647 -111140118 - AluSx SINE Alu 0 309 1 297 230 48 26 chr10 29177825 29177913 -111138852 + MIR SINE MIR 30 117 -91 807 142 7 47 chr10 29178186 29178334 -111138431 + FLAM_C SINE Alu 2 143 0 23 0 0 0 chr10 29179311 29179334 -111137431 + AT_rich Low_complexity Low_complexity 1 23 0 282 56 0 0 chr10 29179692 29179728 -111137037 + (CA)n Simple_repeat Simple_repeat 1 36 0 362 297 109 11 chr10 29180154 29180329 -111136436 + MIR SINE MIR 16 207 -55 841 204 0 25 chr10 29181700 29181862 -111134903 + FRAM SINE Alu 1 158 -18 784 118 0 0 chr10 29188803 29188905 -111127860 + AluSg/x SINE Alu 155 256 -54 27 29 0 0 chr10 29189162 29189196 -111127569 + GC_rich Low_complexity Low_complexity 1 34 0 2261 80 35 0 chr10 29189678 29189965 -111126800 + AluSc SINE Alu 1 297 -12 234 91 0 0 chr10 29190438 29190471 -111126294 + (CA)n Simple_repeat Simple_repeat 1 33 0 2032 83 0 0 chr10 29190514 29190767 -111125998 - AluSc SINE Alu -56 253 1 1783 105 0 4 chr10 29190881 29191120 -111125645 - L1PA7 LINE L1 0 6154 5917 5890 64 18 0 chr10 29191121 29191883 -111124882 + L1P LINE L1 3984 4759 -1387 21 89 0 0 chr10 29192081 29192137 -111124628 + AT_rich Low_complexity Low_complexity 1 56 0 23 33 0 0 chr10 29192279 29192309 -111124456 + AT_rich Low_complexity Low_complexity 1 30 0 243 133 0 0 chr10 29192408 29192453 -111124312 - Alu SINE Alu -6 297 253 1849 128 0 54 chr10 29192591 29192887 -111123878 + AluSx SINE Alu 1 280 -32 4491 237 60 91 chr10 29192908 29194631 -111122134 + pTR5 LTR ERV1 769 2438 0 2312 73 7 7 chr10 29196870 29197172 -111119593 - AluSg SINE Alu -8 302 1 1562 249 148 24 chr10 29197748 29198446 -111118319 - MER20B DNA MER1_type 0 784 1 183 172 0 0 chr10 29199986 29200015 -111116750 + MIR SINE MIR 94 122 -86 24 67 0 0 chr10 29200104 29200149 -111116616 + AT_rich Low_complexity Low_complexity 1 45 0 273 163 0 0 chr10 29200238 29200287 -111116478 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 704 165 119 0 chr10 29200288 29200397 -111116368 - FLAM_C SINE Alu -11 122 1 240 167 21 21 chr10 29200578 29200626 -111116139 + L3 LINE CR1 1354 1401 -176 203 161 0 0 chr10 29200819 29200850 -111115915 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 1991 125 7 3 chr10 29201165 29201461 -111115304 - AluSq SINE Alu -16 297 1 243 133 0 0 chr10 29201599 29201644 -111115121 + Alu SINE Alu 253 297 -6 23 33 0 0 chr10 29201742 29201772 -111114993 + AT_rich Low_complexity Low_complexity 1 30 0 1773 105 0 12 chr10 29202562 29202810 -111113955 + AluSg SINE Alu 31 275 -35 351 44 0 0 chr10 29202811 29202856 -111113909 + (TC)n Simple_repeat Simple_repeat 2 46 0 213 216 0 0 chr10 29202856 29202893 -111113872 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1451 208 7 11 chr10 29203119 29203436 -111113329 - AluJo SINE Alu 0 316 1 297 271 37 19 chr10 29205072 29205179 -111111586 + MIR3 SINE MIR 97 205 -3 1697 151 47 7 chr10 29205363 29205483 -111111282 + AluJo SINE Alu 1 115 -197 219 114 0 0 chr10 29205483 29205518 -111111247 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1697 151 47 7 chr10 29205518 29205675 -111111090 + AluJo SINE Alu 115 289 -23 1030 160 0 43 chr10 29205942 29206129 -111110636 - AluSx SINE Alu 0 312 134 264 290 14 0 chr10 29206467 29206536 -111110229 - L2 LINE L2 0 3272 3203 1987 192 58 7 chr10 29206595 29207011 -111109754 - MLT1D LTR MaLR -12 493 57 4919 214 30 22 chr10 29207012 29208828 -111107937 - L1MB4 LINE L1 -91 6089 4289 186 103 0 0 chr10 29208828 29208857 -111107908 + (TG)n Simple_repeat Simple_repeat 2 30 0 4919 214 30 22 chr10 29208857 29209037 -111107728 - L1MB4 LINE L1 -1891 4289 4112 2001 134 0 32 chr10 29209037 29209351 -111107414 - AluSx SINE Alu -8 304 1 4919 214 30 22 chr10 29209351 29209464 -111107301 - L1MB4 LINE L1 -2068 4112 3969 2138 134 0 0 chr10 29209464 29209769 -111106996 - AluSx SINE Alu -7 305 1 6840 230 56 27 chr10 29210053 29212706 -111104059 - L1ME1 LINE L1 -303 6257 3523 5511 161 23 20 chr10 29212829 29214685 -111102080 + L1PA13 LINE L1 4248 6148 -15 604 171 0 0 chr10 29214688 29214776 -111101989 - AluSx SINE Alu -182 130 43 2657 276 50 13 chr10 29214788 29216411 -111100354 - L1ME1 LINE L1 -3114 3426 1732 2053 122 0 42 chr10 29216952 29217264 -111099501 - AluSx SINE Alu -13 299 1 1959 136 11 0 chr10 29217798 29218098 -111098667 - AluSx SINE Alu 0 303 1 2888 257 47 17 chr10 29219528 29220017 -111096748 - L1ME1 LINE L1 -5016 1524 1051 2097 132 3 0 chr10 29220017 29220313 -111096452 - AluSx SINE Alu -15 297 1 2888 257 47 17 chr10 29220313 29221125 -111095640 - L1ME1 LINE L1 -5489 1051 22 22 0 0 0 chr10 29221846 29221868 -111094897 + AT_rich Low_complexity Low_complexity 1 22 0 227 296 93 81 chr10 29222051 29222298 -111094467 - L3 LINE CR1 -263 1314 1065 183 309 225 40 chr10 29222490 29222814 -111093951 + L2 LINE L2 298 681 -2633 260 260 208 13 chr10 29223017 29223171 -111093594 - L2 LINE L2 0 3313 3130 182 244 0 0 chr10 29223402 29223447 -111093318 + L2 LINE L2 3224 3268 -4 378 246 276 0 chr10 29223466 29223600 -111093165 - MIR SINE MIR -5 257 87 199 250 108 75 chr10 29223651 29223694 -111093071 + MIR SINE MIR 69 109 -153 1944 150 0 4 chr10 29223694 29223974 -111092791 - AluSx SINE Alu -33 279 1 199 250 108 75 chr10 29223974 29224050 -111092715 + MIR SINE MIR 109 192 -70 965 249 68 31 chr10 29224059 29224380 -111092385 - MER46C DNA MER2_type -5 333 1 386 278 87 8 chr10 29224503 29224608 -111092157 + MIR SINE MIR 103 221 -41 2276 95 0 0 chr10 29224608 29224903 -111091862 + AluSg SINE Alu 1 295 -15 386 278 87 8 chr10 29224903 29224923 -111091842 + MIR SINE MIR 221 238 -24 21 0 0 0 chr10 29224954 29224975 -111091790 + AT_rich Low_complexity Low_complexity 1 21 0 910 196 9 85 chr10 29225490 29225714 -111091051 + MER3 DNA MER1_type 3 209 0 1676 158 14 45 chr10 29225833 29226149 -111090616 - AluJo SINE Alu 0 307 1 299 369 89 13 chr10 29226718 29226954 -111089811 + MIR SINE MIR 3 256 -6 550 120 22 0 chr10 29227246 29227338 -111089427 + L1MA7 LINE L1 6196 6289 -2 2391 88 0 7 chr10 29227348 29227653 -111089112 + AluSq SINE Alu 1 303 -10 21 0 0 0 chr10 29227874 29227895 -111088870 + AT_rich Low_complexity Low_complexity 1 21 0 494 200 70 26 chr10 29228216 29228331 -111088434 - MER99 DNA DNA -707 121 2 471 113 0 0 chr10 29228671 29228742 -111088023 + (TCTCC)n Simple_repeat Simple_repeat 3 73 0 569 183 11 0 chr10 29228753 29228846 -111087919 - AluJ/FLAM SINE Alu -215 97 4 601 266 73 66 chr10 29228980 29229239 -111087526 + MIR SINE MIR 2 262 0 1764 107 19 8 chr10 29231162 29231451 -111085314 + AluSc SINE Alu 24 309 0 405 86 0 0 chr10 29232467 29232525 -111084240 + (CA)n Simple_repeat Simple_repeat 2 59 0 10199 33 11 128 chr10 29233174 29234701 -111082064 - SVA Other Other 0 1386 38 279 0 0 0 chr10 29234706 29234737 -111082028 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 186 184 40 92 chr10 29235290 29235366 -111081399 - L2 LINE L2 0 3313 3242 207 0 0 0 chr10 29236066 29236089 -111080676 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 680 256 92 22 chr10 29236098 29236415 -111080350 - L1MC4a LINE L1 -1883 5925 5587 41968 40 4 0 chr10 29236468 29242600 -111074165 + L1PA4 LINE L1 7 6162 0 632 189 20 117 chr10 29242609 29242805 -111073960 - MER31-int LTR ERV1 -4122 814 638 285 178 139 40 chr10 29242814 29242915 -111073850 - MIR SINE MIR -34 228 118 22 35 0 0 chr10 29242954 29242983 -111073782 + AT_rich Low_complexity Low_complexity 1 29 0 2483 72 3 0 chr10 29243703 29244007 -111072758 + AluY SINE Alu 1 305 -6 216 0 0 0 chr10 29244433 29244457 -111072308 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 221 224 252 19 chr10 29245534 29245641 -111071124 + MIR SINE MIR 14 145 -117 1908 101 8 0 chr10 29246008 29246266 -111070499 - AluSg SINE Alu -16 294 35 2131 82 4 4 chr10 29246362 29246643 -111070122 - AluY SINE Alu -30 281 1 1864 176 0 0 chr10 29246962 29247264 -111069501 + AluSx SINE Alu 1 302 -10 1062 205 60 3 chr10 29247701 29248003 -111068762 - MER33 DNA MER1_type 0 324 6 2367 67 27 0 chr10 29248824 29249121 -111067644 + AluY SINE Alu 1 305 -6 192 200 0 0 chr10 29249264 29249304 -111067461 + (TA)n Simple_repeat Simple_repeat 1 40 0 776 185 0 0 chr10 29249980 29250115 -111066650 + AluJo SINE Alu 1 135 -177 25 51 0 0 chr10 29250235 29250274 -111066491 + AT_rich Low_complexity Low_complexity 1 39 0 569 202 0 0 chr10 29250725 29250829 -111065936 - U6 snRNA snRNA -2 105 2 2144 96 0 4 chr10 29252528 29252809 -111063956 - AluSc SINE Alu -18 291 12 400 87 54 0 chr10 29252816 29252908 -111063857 + (TA)n Simple_repeat Simple_repeat 2 98 0 508 81 58 29 chr10 29252923 29253097 -111063668 + (TA)n Simple_repeat Simple_repeat 2 180 0 1847 135 38 7 chr10 29253352 29253640 -111063125 + AluSq SINE Alu 7 303 -10 261 335 88 26 chr10 29253674 29253868 -111062897 + MIR SINE MIR 26 231 -31 569 202 0 0 chr10 29255681 29255785 -111060980 + U6 snRNA snRNA 2 105 -2 25 51 0 0 chr10 29256240 29256279 -111060486 + AT_rich Low_complexity Low_complexity 1 39 0 776 185 0 0 chr10 29256399 29256534 -111060231 - AluJo SINE Alu -177 135 1 192 200 0 0 chr10 29257210 29257250 -111059515 + (TA)n Simple_repeat Simple_repeat 1 40 0 2192 84 3 7 chr10 29257392 29257678 -111059087 - AluSx SINE Alu -5 307 23 467 331 76 18 chr10 29257783 29258112 -111058653 - L1M4 LINE L1 -3679 2467 2120 520 183 30 179 chr10 29259394 29259629 -111057136 - L2 LINE L2 -1 3312 3113 836 195 6 24 chr10 29259629 29259793 -111056972 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 29259803 29260088 -111056677 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 29261567 29261696 -111055069 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 29261781 29262090 -111054675 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 29262550 29262836 -111053929 + AluJo SINE Alu 1 281 -31 317 296 131 30 chr10 29263739 29264034 -111052731 - L1 LINE L1 -1315 4831 4502 25 31 0 0 chr10 29264508 29264540 -111052225 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 29265471 29265780 -111050985 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 29265797 29266005 -111050760 + FRAM SINE Alu 1 196 0 1740 185 30 0 chr10 29266523 29266825 -111049940 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 29266832 29266880 -111049885 + AT_rich Low_complexity Low_complexity 1 48 0 189 192 137 0 chr10 29267166 29267239 -111049526 + MIR SINE MIR 131 213 -49 5587 112 16 11 chr10 29267396 29267500 -111049265 - L1PA11 LINE L1 -2 6172 6070 414 0 0 0 chr10 29267500 29267546 -111049219 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1950 132 0 24 chr10 29267546 29267833 -111048932 - AluSx SINE Alu -28 284 5 5587 112 16 11 chr10 29267833 29268848 -111047917 - L1PA11 LINE L1 -103 6071 5037 214 327 0 0 chr10 29268848 29268900 -111047865 + MIR3 SINE MIR 115 166 -42 247 354 72 11 chr10 29269659 29269840 -111046925 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 29270048 29270071 -111046694 + AT_rich Low_complexity Low_complexity 1 23 0 2258 86 3 3 chr10 29270365 29270657 -111046108 - AluY SINE Alu -14 297 6 714 251 76 28 chr10 29270711 29270922 -111045843 + MER58A DNA MER1_type 4 224 0 389 294 95 19 chr10 29271112 29271323 -111045442 + MLT1L LTR MaLR 144 370 -245 2012 122 41 3 chr10 29271349 29271643 -111045122 + AluSg SINE Alu 1 305 -5 1780 138 18 4 chr10 29272254 29272563 -111044202 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 29272691 29272727 -111044038 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 29273104 29273132 -111043633 + AT_rich Low_complexity Low_complexity 1 28 0 1797 168 43 47 chr10 29273558 29273998 -111042767 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 29274049 29274104 -111042661 + FLAM SINE Alu 67 121 -22 357 43 0 0 chr10 29274108 29274155 -111042610 + (CATA)n Simple_repeat Simple_repeat 2 48 0 41 21 0 0 chr10 29274270 29274318 -111042447 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 29274587 29274632 -111042133 + (TA)n Simple_repeat Simple_repeat 1 45 0 183 328 109 0 chr10 29275108 29275227 -111041538 + MIR SINE MIR 90 221 -41 828 176 0 0 chr10 29275301 29275437 -111041328 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 29275573 29275626 -111041139 + AT_rich Low_complexity Low_complexity 1 53 0 573 200 0 0 chr10 29276064 29276169 -111040596 - U6 snRNA snRNA -2 105 1 708 220 11 21 chr10 29278023 29278214 -111038551 + MSTB2 LTR MaLR 263 451 -6 2603 162 23 2 chr10 29278214 29278696 -111038069 + L1MC1 LINE L1 5842 6333 0 582 264 96 30 chr10 29278699 29279252 -111037513 + L1MEd LINE L1 947 1579 -4731 231 61 0 0 chr10 29279284 29279317 -111037448 + (TG)n Simple_repeat Simple_repeat 2 34 0 667 208 0 8 chr10 29279605 29279730 -111037035 + FLAM_C SINE Alu 1 124 -19 872 38 19 0 chr10 29279997 29280102 -111036663 - AluY SINE Alu -11 300 194 617 350 85 27 chr10 29280106 29280307 -111036458 - L1M4 LINE L1 -3353 2793 2605 2083 94 10 7 chr10 29280307 29280595 -111036170 - AluSx SINE Alu -1 311 23 617 350 85 27 chr10 29280595 29281030 -111035735 - L1M4 LINE L1 -3541 2605 2120 319 318 29 69 chr10 29281437 29281610 -111035155 - HAL1 LINE L1 -737 1770 1605 458 177 28 222 chr10 29282313 29282561 -111034204 - L2 LINE L2 -1 3312 3113 859 189 6 24 chr10 29282561 29282725 -111034040 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 29282735 29283020 -111033745 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 29284499 29284628 -111032137 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 29284713 29285022 -111031743 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 29285482 29285768 -111030997 + AluJo SINE Alu 1 281 -31 307 314 171 43 chr10 29286671 29286951 -111029814 - L1 LINE L1 -1315 4831 4516 25 31 0 0 chr10 29287439 29287471 -111029294 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 29288402 29288711 -111028054 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 29288728 29288939 -111027826 + FRAM SINE Alu 1 199 0 1740 185 30 0 chr10 29289457 29289759 -111027006 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 29289766 29289814 -111026951 + AT_rich Low_complexity Low_complexity 1 48 0 189 192 137 0 chr10 29290100 29290173 -111026592 + MIR SINE MIR 131 213 -49 5618 111 16 11 chr10 29290330 29290434 -111026331 - L1PA11 LINE L1 -2 6172 6070 486 0 0 0 chr10 29290434 29290488 -111026277 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1960 129 0 24 chr10 29290488 29290775 -111025990 - AluSx SINE Alu -28 284 5 5618 111 16 11 chr10 29290775 29291790 -111024975 - L1PA11 LINE L1 -103 6071 5037 204 346 0 0 chr10 29291790 29291842 -111024923 + MIR3 SINE MIR 115 166 -42 247 354 72 11 chr10 29292602 29292783 -111023982 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 29292991 29293014 -111023751 + AT_rich Low_complexity Low_complexity 1 23 0 2245 89 3 3 chr10 29293306 29293598 -111023167 - AluY SINE Alu -14 297 6 714 251 76 28 chr10 29293652 29293863 -111022902 + MER58A DNA MER1_type 4 224 0 374 299 95 19 chr10 29294053 29294264 -111022501 + MLT1L LTR MaLR 144 370 -245 2012 122 41 3 chr10 29294290 29294584 -111022181 + AluSg SINE Alu 1 305 -5 1780 138 18 4 chr10 29295195 29295504 -111021261 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 29295632 29295668 -111021097 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 29296045 29296073 -111020692 + AT_rich Low_complexity Low_complexity 1 28 0 1797 168 43 47 chr10 29296499 29296939 -111019826 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 29296990 29297045 -111019720 + FLAM SINE Alu 67 121 -22 360 59 0 0 chr10 29297049 29297100 -111019665 + (CATA)n Simple_repeat Simple_repeat 2 52 0 41 21 0 0 chr10 29297215 29297263 -111019502 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 29297532 29297577 -111019188 + (TA)n Simple_repeat Simple_repeat 2 46 0 183 328 109 0 chr10 29298053 29298172 -111018593 + MIR SINE MIR 90 221 -41 828 176 0 0 chr10 29298246 29298382 -111018383 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 29298518 29298571 -111018194 + AT_rich Low_complexity Low_complexity 1 53 0 573 200 0 0 chr10 29299009 29299114 -111017651 - U6 snRNA snRNA -2 105 1 2248 114 0 3 chr10 29301136 29301443 -111015322 - AluSq SINE Alu -7 306 1 2183 136 0 0 chr10 29301695 29301996 -111014769 - AluSx SINE Alu -10 302 2 209 244 93 35 chr10 29302682 29302768 -111013997 + L2 LINE L2 3175 3265 -48 22 70 0 0 chr10 29303680 29303723 -111013042 + AT_rich Low_complexity Low_complexity 1 43 0 252 321 19 0 chr10 29303778 29303884 -111012881 - MER102a DNA MER1_type -1 329 222 685 251 101 64 chr10 29304936 29305192 -111011573 + MIR SINE MIR 2 261 -1 438 272 11 33 chr10 29305284 29305468 -111011297 + MER104 DNA MER2_type 1 180 0 23 68 0 0 chr10 29306272 29306316 -111010449 + AT_rich Low_complexity Low_complexity 1 44 0 302 337 79 28 chr10 29306718 29306896 -111009869 - L1ME LINE L1 -444 5677 5491 21 57 0 0 chr10 29307341 29307376 -111009389 + AT_rich Low_complexity Low_complexity 1 35 0 1695 245 50 20 chr10 29307433 29308036 -111008729 - L1ME LINE L1 -1054 5092 4472 1161 148 32 4 chr10 29308427 29308662 -111008103 - L1ME LINE L1 -436 5730 5487 2292 91 6 15 chr10 29309603 29309944 -111006821 - L1PA12 LINE L1 -1 6167 5830 27 29 0 0 chr10 29310106 29310140 -111006625 + AT_rich Low_complexity Low_complexity 1 34 0 1035 93 35 0 chr10 29310707 29310879 -111005886 + CT-rich Low_complexity Low_complexity 3 180 0 2240 118 0 0 chr10 29311644 29312121 -111004644 - AluSx SINE Alu 0 477 1 231 298 10 10 chr10 29312237 29312341 -111004424 - MER113 DNA MER1_type? -313 208 105 1051 145 22 57 chr10 29315185 29315203 -111001562 - LTR49-int LTR ERV1 -4741 1590 1573 5193 110 18 5 chr10 29315203 29316018 -111000747 - L1MA1 LINE L1 0 6302 5477 1051 145 22 57 chr10 29316018 29316055 -111000710 - LTR49-int LTR ERV1 -4758 1573 1536 2026 136 3 3 chr10 29316055 29316350 -111000415 - AluSg SINE Alu -15 295 1 1051 145 22 57 chr10 29316350 29316520 -111000245 - LTR49-int LTR ERV1 -4795 1536 1372 4757 177 29 40 chr10 29316615 29316644 -111000121 - LTR49-int LTR ERV1 -4494 1452 1424 1026 187 10 5 chr10 29316644 29316847 -110999918 + L1PA16 LINE L1 5959 6162 -4 4757 177 29 40 chr10 29316847 29317904 -110998861 - LTR49-int LTR ERV1 -4522 1424 363 1721 178 43 7 chr10 29317939 29318349 -110998416 - LTR49-int LTR ERV1 -4619 1327 1 1314 215 48 11 chr10 29318353 29318707 -110998058 - LTR49 LTR ERV1 -2 593 227 2704 62 0 0 chr10 29319164 29319505 -110997260 - L1PA7 LINE L1 -13 6141 5801 28 29 0 0 chr10 29319746 29319781 -110996984 + AT_rich Low_complexity Low_complexity 1 35 0 317 196 0 28 chr10 29319860 29319967 -110996798 + (CA)n Simple_repeat Simple_repeat 1 104 0 252 184 0 0 chr10 29320002 29320051 -110996714 + (CA)n Simple_repeat Simple_repeat 2 50 0 261 143 0 0 chr10 29321313 29321355 -110995410 - MER41-int LTR ERV1 -4679 1267 1226 253 252 29 0 chr10 29321521 29321624 -110995141 + (TA)n Simple_repeat Simple_repeat 1 106 0 226 246 0 0 chr10 29322393 29322450 -110994315 + (TA)n Simple_repeat Simple_repeat 1 57 0 441 66 0 0 chr10 29322514 29322575 -110994190 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 308 311 8 0 chr10 29322576 29322708 -110994057 + (TA)n Simple_repeat Simple_repeat 1 133 0 1794 109 4 15 chr10 29323311 29323577 -110993188 + AluSx SINE Alu 41 303 -9 237 230 0 0 chr10 29324387 29324461 -110992304 + (TA)n Simple_repeat Simple_repeat 1 74 0 195 42 0 0 chr10 29324486 29324510 -110992255 + (CA)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr10 29324698 29324725 -110992040 + (TATG)n Simple_repeat Simple_repeat 4 30 0 198 156 0 0 chr10 29324972 29325017 -110991748 + (TA)n Simple_repeat Simple_repeat 2 46 0 898 283 46 38 chr10 29325523 29326021 -110990744 + MLT1J LTR MaLR 1 502 -9 1110 209 35 4 chr10 29326984 29327238 -110989527 - MER31B LTR ERV1 -203 263 2 578 160 10 0 chr10 29327341 29327441 -110989324 - MLT1E1 LTR MaLR -31 623 523 25 0 0 0 chr10 29327845 29327870 -110988895 + AT_rich Low_complexity Low_complexity 1 25 0 2101 169 23 21 chr10 29328926 29329357 -110987408 - L1MB7 LINE L1 -67 6117 5686 1132 207 114 4 chr10 29331354 29331625 -110985140 - AluJb SINE Alu 0 302 2 1844 124 58 7 chr10 29331639 29331913 -110984852 - AluSg1 SINE Alu -21 288 1 223 354 0 0 chr10 29331985 29332064 -110984701 + CT-rich Low_complexity Low_complexity 3 81 0 26 30 0 0 chr10 29332209 29332242 -110984523 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 29332403 29332435 -110984330 + AT_rich Low_complexity Low_complexity 1 32 0 2189 121 3 6 chr10 29332435 29332748 -110984017 - AluSx SINE Alu 0 312 1 192 77 0 0 chr10 29333092 29333118 -110983647 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 758 186 0 0 chr10 29333391 29333515 -110983250 + FLAM_C SINE Alu 1 124 -19 1553 180 10 20 chr10 29333530 29333824 -110982941 + AluJo SINE Alu 1 291 -21 374 265 37 34 chr10 29334665 29334808 -110981957 - MLT1K LTR MaLR -23 565 395 192 40 0 0 chr10 29334808 29334833 -110981932 + (T)n Simple_repeat Simple_repeat 1 25 0 251 342 52 19 chr10 29335032 29335187 -110981578 - MLT1K LTR MaLR -382 206 47 2167 125 50 36 chr10 29335265 29335624 -110981141 + THE1B LTR MaLR 1 364 0 2433 76 0 0 chr10 29336805 29337095 -110979670 - AluSc SINE Alu -19 290 1 931 67 0 8 chr10 29337095 29337215 -110979550 - AluSx SINE Alu 0 312 194 839 85 0 0 chr10 29337219 29337325 -110979440 - AluSx SINE Alu -175 138 33 1738 156 17 10 chr10 29337596 29337884 -110978881 + AluJb SINE Alu 5 294 -18 1976 129 50 0 chr10 29338158 29338438 -110978327 - AluSx SINE Alu -18 294 1 1172 216 6 3 chr10 29338703 29338735 -110978030 + L1MB1 LINE L1 5921 5951 -238 2090 121 0 0 chr10 29338735 29339044 -110977721 + AluSx SINE Alu 1 309 0 1172 216 6 3 chr10 29339044 29339255 -110977510 + L1MB1 LINE L1 5951 6155 -34 998 164 0 62 chr10 29340260 29340437 -110976328 - FRAM SINE Alu 0 166 1 2133 109 3 7 chr10 29341503 29341797 -110974968 - AluSc SINE Alu -14 295 3 802 161 0 86 chr10 29342238 29342412 -110974353 + L1MA10 LINE L1 6137 6295 -39 2184 114 7 0 chr10 29342430 29342729 -110974036 - AluSx SINE Alu -11 301 1 5588 118 30 11 chr10 29342735 29343596 -110973169 - L1PA15 LINE L1 0 6165 5288 2541 126 19 0 chr10 29343596 29343968 -110972797 - L1PA16 LINE L1 -8 6158 5780 233 188 0 0 chr10 29343968 29344011 -110972754 + L1MA10 LINE L1 6282 6324 -10 225 0 0 0 chr10 29344053 29344078 -110972687 + (A)n Simple_repeat Simple_repeat 1 25 0 263 250 15 0 chr10 29345994 29346062 -110970703 + (TG)n Simple_repeat Simple_repeat 2 70 0 1595 111 4 8 chr10 29346611 29346897 -110969868 - AluSq SINE Alu 0 313 77 477 248 14 86 chr10 29347756 29347966 -110968799 + L2 LINE L2 3119 3313 0 2352 122 73 20 chr10 29348581 29348925 -110967840 + THE1B LTR MaLR 1 362 -2 1062 280 49 107 chr10 29349543 29349632 -110967133 + L1MEc LINE L1 20 113 -6283 1867 129 96 0 chr10 29349632 29349912 -110966853 + AluJb SINE Alu 1 307 -5 1062 280 49 107 chr10 29349912 29350737 -110966028 + L1MEc LINE L1 113 881 -5515 1568 238 70 12 chr10 29350741 29351140 -110965625 + MLT1F LTR MaLR 7 428 -114 1257 90 7 0 chr10 29351144 29351299 -110965466 + AluSx SINE Alu 1 156 -156 2108 89 0 38 chr10 29351300 29351591 -110965174 + AluSx SINE Alu 21 300 -12 623 166 182 53 chr10 29351832 29352079 -110964686 + L1MC5 LINE L1 7319 7597 -364 4207 149 23 17 chr10 29352090 29352794 -110963971 - L1MC1 LINE L1 0 6333 5626 823 363 20 25 chr10 29353058 29353501 -110963264 - L1M3a LINE L1 -5503 452 12 3486 152 90 4 chr10 29353507 29354599 -110962166 - L1MCa LINE L1 -4166 2478 1193 2347 174 4 123 chr10 29354601 29355137 -110961628 - MER70A LTR ERVL 0 472 1 15761 150 26 40 chr10 29355160 29356452 -110960313 - MER70A-int LTR ERVL -10 5013 3705 2603 101 28 17 chr10 29356452 29356809 -110959956 + THE1B LTR MaLR 1 361 -3 15761 150 26 40 chr10 29356809 29358315 -110958450 - MER70A-int LTR ERVL -1318 3705 2252 619 168 10 0 chr10 29358307 29358408 -110958357 - MER70-int LTR ERVL -1678 3345 3244 * 665 280 86 106 chr10 29358442 29358561 -110958204 - L1MCa LINE L1 -5813 729 609 1808 119 8 0 chr10 29358561 29358812 -110957953 + AluSx SINE Alu 57 309 -3 665 280 86 106 chr10 29358812 29359168 -110957597 - L1MCa LINE L1 -5933 609 272 2219 79 7 20 chr10 29359168 29359471 -110957294 - AluSx SINE Alu -13 299 1 665 280 86 106 chr10 29359471 29359738 -110957027 - L1MCa LINE L1 -6270 272 1 1848 140 13 23 chr10 29360094 29360402 -110956363 + AluJo SINE Alu 6 310 -2 1143 244 88 34 chr10 29360439 29360939 -110955826 + L1ME4a LINE L1 4696 5222 -924 31 68 0 0 chr10 29361136 29361195 -110955570 + AT_rich Low_complexity Low_complexity 1 59 0 1812 116 8 4 chr10 29361242 29361500 -110955265 - AluSx SINE Alu -14 298 40 195 42 0 0 chr10 29363111 29363135 -110953630 + (A)n Simple_repeat Simple_repeat 1 24 0 729 191 0 107 chr10 29363968 29364136 -110952629 - Tigger3(Golem) DNA MER2_type -2876 153 4 377 287 135 33 chr10 29364147 29364509 -110952256 + L1ME4a LINE L1 5384 5782 -339 356 243 39 88 chr10 29364575 29364756 -110952009 + L1ME4a LINE L1 5923 6094 -27 400 157 0 60 chr10 29364994 29365077 -110951688 - Tigger3b DNA MER2_type -380 852 775 203 55 109 55 chr10 29365081 29365136 -110951629 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 1038 78 30 104 chr10 29365140 29365358 -110951407 - Tigger3b DNA MER2_type -2241 788 592 2361 68 0 10 chr10 29365358 29365685 -110951080 + AluY SINE Alu 1 311 0 1038 78 30 104 chr10 29365685 29365735 -110951030 - Tigger3b DNA MER2_type -2437 592 540 1185 128 11 16 chr10 29365735 29365922 -110950843 + AluSg/x SINE Alu 120 305 -5 2039 119 92 0 chr10 29365923 29366259 -110950506 - Tigger3b DNA MER2_type -703 528 162 * 3796 135 25 8 chr10 29366257 29366870 -110949895 + Tigger3b DNA MER2_type 609 1231 0 2098 95 29 41 chr10 29368358 29368700 -110948065 - AluSx SINE Alu 0 338 1 371 233 12 12 chr10 29368926 29369012 -110947753 + Tigger7 DNA MER2_type 2401 2486 -1 2393 85 0 0 chr10 29369326 29369621 -110947144 + AluSx SINE Alu 1 295 -17 376 324 70 14 chr10 29370559 29370701 -110946064 - MER5B DNA MER1_type -5 173 24 250 289 51 51 chr10 29371167 29371323 -110945442 + L1MB4 LINE L1 5 160 -6382 1390 77 0 0 chr10 29371530 29371700 -110945065 + AluY SINE Alu 129 298 -13 1814 166 3 17 chr10 29371747 29372049 -110944716 + AluJo SINE Alu 11 308 -4 8751 230 49 15 chr10 29372052 29372510 -110944255 + L1MB4 LINE L1 2551 2992 -3652 2110 167 0 0 chr10 29372510 29372822 -110943943 + AluSx SINE Alu 1 312 0 8751 230 49 15 chr10 29372822 29373369 -110943396 + L1MB4 LINE L1 2992 3519 -3125 1652 229 80 0 chr10 29373369 29373705 -110943060 - MLT1A1 LTR MaLR 0 365 3 8751 230 49 15 chr10 29373705 29375284 -110941481 + L1MB4 LINE L1 3519 5223 -1421 1545 191 37 39 chr10 29375277 29375659 -110941106 + L1MB4 LINE L1 6295 6675 -3 * 1395 174 0 0 chr10 29376130 29376349 -110940416 - AluJb SINE Alu -93 219 1 838 305 72 22 chr10 29378647 29379228 -110937537 - L1MC4a LINE L1 -23 6098 5490 1342 175 68 115 chr10 29379557 29379940 -110936825 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr10 29379952 29379975 -110936790 + AT_rich Low_complexity Low_complexity 1 23 0 567 313 88 17 chr10 29380110 29380455 -110936310 + MLT1J2 LTR MaLR 65 444 -2 2179 124 0 3 chr10 29380979 29381278 -110935487 + AluSx SINE Alu 1 298 -14 1166 238 75 14 chr10 29381452 29381687 -110935078 - MER114 LTR ERV -5 643 424 1821 156 11 0 chr10 29381687 29381969 -110934796 + AluSq SINE Alu 1 285 -28 1166 238 75 14 chr10 29381969 29382162 -110934603 - MER114 LTR ERV -224 424 189 37407 43 4 1 chr10 29382171 29388291 -110928474 + L1PA4 LINE L1 11 6155 0 1417 207 12 61 chr10 29388304 29388714 -110928051 + MLT2C1 LTR ERVL 1 390 -7 249 57 0 0 chr10 29388715 29388750 -110928015 + (TA)n Simple_repeat Simple_repeat 2 36 0 5687 246 50 20 chr10 29388771 29390904 -110925861 + ERVL-C1-C1 LTR ERVL 25 2292 -3472 12893 186 66 24 chr10 29390906 29391260 -110925505 + ERVL-C1-C1 LTR ERVL 2465 2803 -2961 774 164 0 16 chr10 29391260 29391388 -110925377 + AluJo/FLAM SINE Alu 1 126 -176 1974 125 7 10 chr10 29391391 29391688 -110925077 + AluSx SINE Alu 1 296 -16 12893 186 66 24 chr10 29391688 29391886 -110924879 + ERVL-C1-C1 LTR ERVL 2804 2992 -2772 273 29 0 0 chr10 29391886 29391920 -110924845 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2098 113 7 0 chr10 29391924 29392206 -110924559 - AluSp SINE Alu -29 284 1 12893 186 66 24 chr10 29392206 29394273 -110922492 + ERVL-C1-C1 LTR ERVL 2994 5222 -542 1232 86 48 32 chr10 29394273 29394460 -110922305 + MER30B DNA MER1_type 1 190 0 12893 186 66 24 chr10 29394460 29394643 -110922122 + ERVL-C1-C1 LTR ERVL 5222 5396 -368 550 239 58 0 chr10 29394682 29394837 -110921928 + ERVL-C1-C1 LTR ERVL 5522 5685 -79 9274 29 8 1 chr10 29394843 29396039 -110920726 + L1P LINE L1 2575 3778 -2368 415 110 0 14 chr10 29396052 29396125 -110920640 + ERVL-C1-C1 LTR ERVL 5686 5757 -7 1468 149 13 112 chr10 29396135 29396518 -110920247 + MLT2C1 LTR ERVL 5 349 -48 186 133 0 0 chr10 29396519 29396549 -110920216 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 372 22 0 0 chr10 29396553 29396598 -110920167 + (TG)n Simple_repeat Simple_repeat 2 46 0 376 246 62 15 chr10 29396657 29396852 -110919913 - MER114 LTR ERV -444 204 1 499 228 36 55 chr10 29396932 29397350 -110919415 + L1ME LINE L1 1260 1668 -4716 2995 261 50 16 chr10 29397360 29398593 -110918172 + L1ME LINE L1 3126 4399 -1983 2347 264 63 22 chr10 29398594 29399550 -110917215 + L1ME LINE L1 4455 5457 -925 2140 73 4 0 chr10 29399550 29399809 -110916956 - AluY SINE Alu -17 294 35 2347 264 63 22 chr10 29399809 29399871 -110916894 + L1ME LINE L1 5457 5515 -867 1265 134 40 102 chr10 29399894 29400169 -110916596 + AluJo SINE Alu 39 296 -16 600 206 111 10 chr10 29400172 29400371 -110916394 + L1ME LINE L1 5538 5756 -642 4840 200 62 26 chr10 29400402 29400887 -110915878 + MER45R DNA AcHobo 52 518 -1063 2288 94 7 0 chr10 29400887 29401185 -110915580 + AluSx SINE Alu 1 300 -12 4840 200 62 26 chr10 29401185 29401945 -110914820 + MER45R DNA AcHobo 518 1341 -240 779 193 75 53 chr10 29402110 29402227 -110914538 + L1M4 LINE L1 4143 4256 -1890 195 42 0 0 chr10 29402227 29402251 -110914514 + (CA)n Simple_repeat Simple_repeat 1 24 0 779 193 75 53 chr10 29402251 29402361 -110914404 + L1M4 LINE L1 4256 4375 -1771 227 266 19 39 chr10 29402360 29402514 -110914251 + L1M4 LINE L1 2282 2432 -3714 * 277 232 43 0 chr10 29403573 29403642 -110913123 + L2 LINE L2 3242 3313 0 612 233 16 21 chr10 29403778 29403971 -110912794 - HAL1b LINE L1 -551 797 606 365 238 48 60 chr10 29404053 29404221 -110912544 - HAL1b LINE L1 -872 476 311 315 313 26 26 chr10 29404346 29404461 -110912304 - HAL1b LINE L1 -1163 185 71 1296 157 18 44 chr10 29404795 29405024 -110911741 + AluJo SINE Alu 21 243 -69 537 281 76 25 chr10 29405062 29405300 -110911465 + HAL1 LINE L1 273 522 -1985 211 247 26 0 chr10 29405348 29405425 -110911340 + (TTA)n Simple_repeat Simple_repeat 1 79 0 684 133 0 0 chr10 29405439 29405537 -110911228 - AluJ/FLAM SINE Alu -214 98 1 209 56 0 28 chr10 29405750 29405786 -110910979 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1475 182 6 20 chr10 29405792 29405898 -110910867 + L1MA4 LINE L1 5963 6069 -231 1240 152 190 8 chr10 29405898 29406161 -110910604 + AluYa5 SINE Alu 1 311 0 1475 182 6 20 chr10 29406161 29406395 -110910370 + L1MA4 LINE L1 6069 6298 -2 332 329 13 58 chr10 29406537 29406692 -110910073 - HAL1 LINE L1 -891 1616 1469 303 242 0 55 chr10 29406684 29406775 -110909990 - L1MC4 LINE L1 -1343 6699 6614 * 702 98 17 75 chr10 29406785 29406959 -110909806 + (TATATG)n Simple_repeat Simple_repeat 5 168 0 311 239 57 34 chr10 29406963 29407051 -110909714 + L1MC4 LINE L1 6614 6703 -1339 291 170 18 74 chr10 29407064 29407549 -110909216 + (CATA)n Simple_repeat Simple_repeat 1 457 0 383 231 61 0 chr10 29407553 29407700 -110909065 + (TA)n Simple_repeat Simple_repeat 2 157 0 701 139 98 0 chr10 29407731 29407853 -110908912 - AluSq/x SINE Alu -178 134 1 2263 94 40 0 chr10 29407897 29408196 -110908569 + AluSq SINE Alu 1 311 -2 894 177 26 151 chr10 29408439 29408498 -110908267 - MLT2B3 LTR ERVL -8 546 481 2068 116 36 13 chr10 29408498 29408800 -110907965 + AluSx SINE Alu 1 309 -3 894 177 26 151 chr10 29408800 29409051 -110907714 - MLT2B3 LTR ERVL -73 481 275 363 44 0 0 chr10 29410253 29410298 -110906467 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 582 163 12 25 chr10 29410376 29410536 -110906229 + CT-rich Low_complexity Low_complexity 4 161 0 912 174 12 8 chr10 29410642 29410890 -110905875 + CT-rich Low_complexity Low_complexity 1 249 0 1457 204 19 41 chr10 29410896 29411215 -110905550 - AluJo SINE Alu 0 312 1 192 313 75 62 chr10 29412137 29412217 -110904548 + L2 LINE L2 3138 3218 -54 852 152 0 41 chr10 29412377 29412522 -110904243 + FLAM_C SINE Alu 1 139 -4 537 350 62 0 chr10 29413637 29413880 -110902885 + MIR SINE MIR 5 262 0 239 289 141 4 chr10 29413972 29414214 -110902551 - L1 LINE L1 -2191 3955 3681 447 246 164 30 chr10 29414412 29414972 -110901793 - L1 LINE L1 -2638 3508 2874 1615 162 3 53 chr10 29415032 29415334 -110901431 - AluJb SINE Alu -25 287 1 357 366 54 9 chr10 29415676 29415900 -110900865 - HAL1 LINE L1 -761 1746 1513 2074 117 14 10 chr10 29415973 29416263 -110900502 - AluSx SINE Alu -21 291 1 6308 128 20 27 chr10 29416275 29417119 -110899646 - L1MA3 LINE L1 0 6305 5456 2074 153 0 13 chr10 29417119 29417432 -110899333 - AluSx SINE Alu -3 309 1 6308 128 20 27 chr10 29417432 29418559 -110898206 - L1MA3 LINE L1 -849 5456 4354 571 101 25 0 chr10 29418567 29418646 -110898119 + AluSg/x SINE Alu 209 289 -23 26 30 0 0 chr10 29419264 29419297 -110897468 + AT_rich Low_complexity Low_complexity 1 33 0 1558 154 47 25 chr10 29419550 29419829 -110896936 + AluJo SINE Alu 5 289 -23 315 49 0 0 chr10 29419830 29419871 -110896894 + (CA)n Simple_repeat Simple_repeat 2 42 0 1335 239 5 46 chr10 29420176 29420590 -110896175 + MLT2C1 LTR ERVL 1 397 0 429 266 43 98 chr10 29420826 29421224 -110895541 - HAL1 LINE L1 -924 1583 1208 342 202 149 90 chr10 29421439 29421627 -110895138 - HAL1 LINE L1 -1493 1014 816 2375 164 45 24 chr10 29421938 29422445 -110894320 - L1MB3 LINE L1 -12 6171 5654 260 250 20 60 chr10 29422746 29422846 -110893919 + MIR SINE MIR 7 102 -160 252 86 0 0 chr10 29423769 29423804 -110892961 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 324 45 63 chr10 29424261 29424372 -110892393 - MIR3 SINE MIR -6 202 94 3885 139 12 145 chr10 29424570 29425611 -110891154 - MER4D LTR ERV1 0 903 1 2097 83 0 4 chr10 29425776 29426066 -110890699 + AluY SINE Alu 36 324 0 1785 133 66 36 chr10 29426068 29426430 -110890335 - THE1C LTR MaLR -2 373 1 210 71 0 0 chr10 29426552 29426580 -110890185 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 371 218 38 16 chr10 29426831 29426961 -110889804 + MIR SINE MIR 41 176 -63 2056 174 31 7 chr10 29427025 29427430 -110889335 - MSTA LTR MaLR 0 428 21 1451 198 47 0 chr10 29427776 29428095 -110888670 + MER58B DNA MER1_type 6 339 -2 813 265 57 5 chr10 29428142 29428353 -110888412 - MIR SINE MIR -10 252 31 3368 67 2 9 chr10 29429200 29429651 -110887114 + LTR7 LTR ERV1 1 448 -2 2779 112 4 32 chr10 29429653 29430125 -110886640 + HERVH LTR ERV1 1 459 -7254 3658 223 19 53 chr10 29430183 29431898 -110884867 + HERVH LTR ERV1 800 2265 -4389 * 17414 70 9 8 chr10 29431895 29434377 -110882388 + HERVH LTR ERV1 5229 7713 0 3410 60 2 9 chr10 29434377 29434828 -110881937 + LTR7 LTR ERV1 1 448 -2 202 339 0 0 chr10 29435437 29435493 -110881272 - L2 LINE L2 -43 3270 3215 1557 297 46 30 chr10 29435946 29436029 -110880736 - L2 LINE L2 -133 3180 3100 500 270 40 23 chr10 29436029 29436203 -110880562 - MER5B DNA MER1_type 0 178 2 1557 297 46 30 chr10 29436203 29436951 -110879814 - L2 LINE L2 -213 3100 2328 2198 114 0 10 chr10 29438398 29438697 -110878068 - AluSx SINE Alu -16 296 1 523 237 25 0 chr10 29438912 29439030 -110877735 - MIR SINE MIR -72 190 70 2001 116 0 69 chr10 29440372 29440690 -110876075 + AluSx SINE Alu 1 296 -16 1072 196 0 0 chr10 29441105 29441314 -110875451 - L1MB1 LINE L1 -36 6153 5945 2066 124 0 0 chr10 29441314 29441623 -110875142 - AluSx SINE Alu 0 309 1 25 0 0 0 chr10 29441919 29441944 -110874821 + AT_rich Low_complexity Low_complexity 1 25 0 2311 103 3 0 chr10 29442141 29442441 -110874324 + AluSx SINE Alu 1 301 -11 1399 175 49 8 chr10 29442448 29442711 -110874054 + AluJb SINE Alu 6 279 -33 1321 80 6 0 chr10 29442767 29442930 -110873835 + AluSp SINE Alu 11 174 -139 2104 131 0 16 chr10 29443050 29443356 -110873409 - AluJb SINE Alu 0 312 12 28 0 0 0 chr10 29443628 29443656 -110873109 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 29443843 29443864 -110872901 + AT_rich Low_complexity Low_complexity 1 21 0 723 96 0 0 chr10 29444329 29444423 -110872342 + AluS SINE Alu 3 96 -216 571 272 28 18 chr10 29444437 29444766 -110871999 - L1MCc LINE L1 -4891 1532 1341 505 236 80 30 chr10 29444772 29445050 -110871715 + L1ME3A LINE L1 5153 5445 -717 279 179 60 0 chr10 29445082 29445149 -110871616 + MER115 DNA AcHobo 583 653 -40 233 125 0 42 chr10 29445182 29445230 -110871535 - L1MC4 LINE L1 -5 8037 7992 * 830 275 127 32 chr10 29445226 29445626 -110871139 + L1ME3A LINE L1 5439 5915 -255 2290 102 0 0 chr10 29445626 29445919 -110870846 + AluSc SINE Alu 1 293 -16 830 275 127 32 chr10 29445919 29446108 -110870657 + L1ME3A LINE L1 5915 6084 -86 1217 76 0 0 chr10 29446301 29446445 -110870320 - AluSc SINE Alu -143 166 23 1062 100 0 0 chr10 29446445 29446585 -110870180 + AluSg/x SINE Alu 173 312 0 22 56 0 0 chr10 29447077 29447113 -110869652 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 29447145 29447169 -110869596 + AT_rich Low_complexity Low_complexity 1 24 0 1942 171 25 34 chr10 29447833 29448394 -110868371 - MLT2A2 LTR ERVL 0 554 1 1471 165 61 61 chr10 29448415 29448712 -110868053 - AluJo SINE Alu -15 297 1 274 289 0 78 chr10 29448712 29448854 -110867911 + MIR SINE MIR 65 195 -67 2112 118 6 13 chr10 29448861 29449174 -110867591 + AluSx SINE Alu 1 311 -1 1079 214 24 0 chr10 29449998 29450208 -110866557 - MER20 DNA MER1_type -4 215 1 278 299 104 28 chr10 29450414 29450558 -110866207 - MIR SINE MIR -10 252 98 917 119 8 0 chr10 29450558 29450684 -110866081 + AluSq/x SINE Alu 1 127 -186 1934 162 0 6 chr10 29450695 29451009 -110865756 + AluSx SINE Alu 1 312 0 639 170 71 0 chr10 29451633 29451774 -110864991 - L1ME3A LINE L1 -12 6158 6008 440 277 96 30 chr10 29452256 29452422 -110864343 + MER5B DNA MER1_type 2 178 0 398 322 106 24 chr10 29452919 29453127 -110863638 - MIR SINE MIR -1 261 37 2255 104 7 0 chr10 29453305 29453592 -110863173 + AluSg SINE Alu 9 297 -13 230 225 25 25 chr10 29453841 29453921 -110862844 - MLT1K LTR MaLR 0 588 509 622 251 115 92 chr10 29453935 29454465 -110862300 - MER34B LTR ERV1 0 565 1 35 0 0 0 chr10 29454527 29454562 -110862203 + AT_rich Low_complexity Low_complexity 1 35 0 4549 109 16 3 chr10 29454562 29455241 -110861524 - L1PB1 LINE L1 0 6151 5464 25 31 0 0 chr10 29455348 29455380 -110861385 + AT_rich Low_complexity Low_complexity 1 32 0 2519 88 38 0 chr10 29455468 29455810 -110860955 - THE1A LTR MaLR 0 355 1 580 359 83 16 chr10 29456018 29456509 -110860256 - MLT1K LTR MaLR -62 526 3 2192 183 54 22 chr10 29457495 29458026 -110858739 - LTR27 LTR ERV1 -141 495 3 405 269 110 0 chr10 29458280 29458425 -110858340 + L1MDa LINE L1 1001 1161 -5379 1220 188 31 10 chr10 29458425 29458713 -110858052 - LTR54 LTR ERV1 0 510 239 4129 140 11 3 chr10 29458721 29459421 -110857344 - L1MA4A LINE L1 -4 6299 5594 4520 138 25 89 chr10 29459421 29459573 -110857192 + L1M1 LINE L1 4250 4410 -1893 195 42 0 0 chr10 29459573 29459597 -110857168 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 4520 138 25 89 chr10 29459597 29460742 -110856023 + L1M1 LINE L1 4410 5438 -865 189 0 0 0 chr10 29460742 29460763 -110856002 + (CA)n Simple_repeat Simple_repeat 2 22 0 4520 138 25 89 chr10 29460763 29460896 -110855869 + L1M1 LINE L1 5438 5578 -725 803 213 72 5 chr10 29460948 29461169 -110855596 - LTR54 LTR ERV1 -274 236 1 778 180 0 0 chr10 29461187 29461309 -110855456 + FAM SINE Alu 10 131 -54 1726 214 48 67 chr10 29461311 29461971 -110854794 + L1MDa LINE L1 1300 1947 -4593 241 258 97 32 chr10 29462019 29462096 -110854669 + L1MDa LINE L1 2085 2156 -4384 4846 102 7 16 chr10 29462096 29462793 -110853972 + LTR8 LTR ERV1 1 691 0 241 258 97 32 chr10 29462793 29462870 -110853895 + L1MDa LINE L1 2156 2249 -4291 1308 246 93 17 chr10 29462881 29463475 -110853290 + L1MDa LINE L1 3338 3976 -2564 602 211 38 53 chr10 29463487 29463696 -110853069 + L1MDa LINE L1 3868 4073 -2467 2330 68 0 42 chr10 29463706 29464015 -110852750 + AluY SINE Alu 1 296 -15 5179 174 28 20 chr10 29464019 29465374 -110851391 - L1MC1 LINE L1 -122 6211 4837 929 184 12 0 chr10 29465480 29465643 -110851122 + FAM SINE Alu 1 165 -10 2365 75 7 0 chr10 29465651 29465944 -110850821 + AluY SINE Alu 1 295 -16 376 309 77 10 chr10 29466072 29466266 -110850499 - LTR33 LTR ERVL -4 517 311 586 248 44 35 chr10 29466342 29466617 -110850148 - ERVL LTR ERVL -883 4602 4460 687 209 0 0 chr10 29466923 29467061 -110849704 + FLAM_A SINE Alu 2 139 0 269 297 40 0 chr10 29468088 29468162 -110848603 - L2 LINE L2 -999 2315 2239 1003 155 44 33 chr10 29468162 29468343 -110848422 + AluJo SINE Alu 38 220 -92 260 173 0 0 chr10 29468343 29468395 -110848370 + FAM SINE Alu 127 178 -1 1613 198 66 50 chr10 29468558 29469058 -110847707 - Charlie1b DNA MER1_type 0 523 16 957 262 142 16 chr10 29469231 29469548 -110847217 - L2 LINE L2 0 3313 2957 302 224 0 0 chr10 29469666 29469715 -110847050 - L2 LINE L2 -20 3252 3204 231 293 120 54 chr10 29469997 29470164 -110846601 - MIR SINE MIR -65 197 20 359 226 73 48 chr10 29471333 29471457 -110845308 - MIR SINE MIR -86 176 50 19586 32 3 0 chr10 29471728 29474858 -110841907 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 29474933 29474978 -110841787 + (CA)n Simple_repeat Simple_repeat 1 45 0 1097 119 17 0 chr10 29475593 29475769 -110840996 + L1P LINE L1 461 639 -5507 9178 25 6 1 chr10 29475777 29477643 -110839122 + L1PA4 LINE L1 4281 6154 -1 2329 190 47 6 chr10 29477686 29478180 -110838585 + L1MCa LINE L1 27 540 -5886 665 126 8 8 chr10 29478178 29478305 -110838460 + L1MCa LINE L1 1880 2006 -4420 * 2271 62 0 0 chr10 29479525 29479823 -110836942 - AluSc SINE Alu 0 308 11 248 240 67 0 chr10 29480114 29480189 -110836576 - MER116 DNA Mariner 0 80 1 1846 163 7 7 chr10 29480308 29480597 -110836168 - AluJo SINE Alu -23 289 1 549 250 8 0 chr10 29480609 29480733 -110836032 - FLAM_C SINE Alu -8 125 1 340 331 104 0 chr10 29481237 29481391 -110835374 + MIR3 SINE MIR 5 174 -34 1461 165 97 25 chr10 29481733 29482012 -110834753 + AluJo SINE Alu 2 300 -12 249 388 24 24 chr10 29483939 29484189 -110832576 + L2 LINE L2 2909 3158 -114 343 304 20 20 chr10 29484208 29484310 -110832455 - L2 LINE L2 -16 3256 3155 188 294 183 32 chr10 29484564 29484690 -110832075 + MIR3 SINE MIR 7 151 -57 1311 189 191 79 chr10 29484819 29485189 -110831576 - L1MC4 LINE L1 -1 8041 7714 1933 137 7 14 chr10 29485189 29485482 -110831283 - AluSx SINE Alu -21 291 1 1311 189 191 79 chr10 29485482 29485930 -110830835 - L1MC4 LINE L1 -328 7714 7026 800 172 0 8 chr10 29485931 29486065 -110830700 - FLAM_A SINE Alu 0 133 1 28 0 0 0 chr10 29486256 29486284 -110830481 + AT_rich Low_complexity Low_complexity 1 28 0 1879 153 7 3 chr10 29486284 29486578 -110830187 - AluSx SINE Alu -13 299 5 2228 113 0 10 chr10 29487009 29487311 -110829454 - AluSx SINE Alu -13 299 1 320 270 83 83 chr10 29488480 29488710 -110828055 + HAL1b LINE L1 15 244 -1104 1747 154 29 10 chr10 29488735 29489041 -110827724 - AluJo SINE Alu 0 312 1 983 185 6 0 chr10 29489564 29489721 -110827044 + AluJb SINE Alu 137 294 -18 353 263 142 76 chr10 29489945 29490234 -110826531 - L1 LINE L1 -2945 3201 2894 2208 119 0 6 chr10 29490250 29490561 -110826204 + AluSx SINE Alu 1 309 -3 2288 104 0 0 chr10 29491056 29491355 -110825410 + AluSx SINE Alu 1 299 -13 2176 212 40 90 chr10 29491672 29493040 -110823725 - L1ME1 LINE L1 -25 6141 4848 2034 234 177 12 chr10 29493083 29493858 -110822907 + L1M4 LINE L1 3797 4699 -1447 1008 206 32 12 chr10 29493865 29494118 -110822647 - L1MEc LINE L1 -2096 4286 4029 * 2035 247 58 33 chr10 29494116 29494611 -110822154 - L1 LINE L1 -2649 3733 3207 2230 125 0 0 chr10 29494611 29494922 -110821843 + AluSx SINE Alu 2 312 0 2035 247 58 33 chr10 29494922 29495252 -110821513 - L1 LINE L1 -3175 3207 2887 3356 85 17 4 chr10 29495358 29495830 -110820935 + L1PB1 LINE L1 5674 6151 0 250 224 52 95 chr10 29495887 29496003 -110820762 + MER21B LTR ERV1 356 466 -397 189 0 0 0 chr10 29496122 29496143 -110820622 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1145 234 81 11 chr10 29496164 29497192 -110819573 - L1MEc LINE L1 -2667 3715 2190 949 258 48 0 chr10 29497242 29497576 -110819189 - L1MEc LINE L1 -4999 1564 1215 613 157 0 91 chr10 29497579 29497777 -110818988 - AluJ SINE Alu -3 309 130 1146 108 0 0 chr10 29497793 29497951 -110818814 + AluY SINE Alu 2 159 -152 2116 75 0 4 chr10 29498094 29498362 -110818403 + AluY SINE Alu 37 303 -8 778 180 0 0 chr10 29498362 29498490 -110818275 - AluJ SINE Alu -174 128 1 343 231 19 10 chr10 29498543 29498647 -110818118 - L1MEc LINE L1 -5461 1102 998 255 217 60 12 chr10 29498704 29498787 -110817978 - Charlie7 DNA MER1_type -2221 391 305 561 231 71 38 chr10 29498788 29499000 -110817765 + Charlie7 DNA MER1_type 381 599 -2013 22 35 0 0 chr10 29501156 29501185 -110815580 + AT_rich Low_complexity Low_complexity 1 29 0 235 294 41 0 chr10 29501747 29501933 -110814832 + (TCTA)n Simple_repeat Simple_repeat 1 193 0 341 312 229 11 chr10 29502869 29503311 -110813454 - L1ME LINE L1 -358 5804 5267 26 0 0 0 chr10 29505354 29505380 -110811385 + AT_rich Low_complexity Low_complexity 1 26 0 250 222 14 28 chr10 29505802 29505862 -110810903 - MER58A DNA MER1_type 0 224 166 434 156 13 13 chr10 29505862 29505939 -110810826 - MER58A DNA MER1_type 0 112 36 227 336 67 0 chr10 29506064 29506168 -110810597 - L2 LINE L2 -10 3303 3193 375 298 120 13 chr10 29506339 29506497 -110810268 + MER5B DNA MER1_type 1 175 -3 515 247 178 20 chr10 29508536 29508682 -110808083 + MER5A DNA MER1_type 18 186 -3 1026 178 104 0 chr10 29508690 29508892 -110807873 + MER58A DNA MER1_type 1 223 -1 209 289 0 0 chr10 29508964 29509016 -110807749 - MER5B DNA MER1_type -124 54 3 874 277 165 39 chr10 29509203 29509417 -110807348 - L2 LINE L2 -59 3254 3068 1368 100 91 0 chr10 29509417 29509627 -110807138 - MER30 DNA MER1_type 0 230 2 874 277 165 39 chr10 29509627 29510064 -110806701 - L2 LINE L2 -245 3068 2687 2462 49 10 0 chr10 29510064 29510352 -110806413 + AluY SINE Alu 4 294 -17 874 277 165 39 chr10 29510352 29510558 -110806207 - L2 LINE L2 -626 2687 2264 1093 166 78 5 chr10 29510614 29510819 -110805946 + AluJb SINE Alu 87 306 -6 2371 288 112 11 chr10 29510825 29511751 -110805014 - L2 LINE L2 -1171 2143 1124 810 293 38 0 chr10 29514416 29514655 -110802110 - MIR SINE MIR 0 262 15 21 0 0 0 chr10 29515603 29515624 -110801141 + AT_rich Low_complexity Low_complexity 1 21 0 506 310 137 51 chr10 29516079 29516531 -110800234 + MLT1K LTR MaLR 80 570 -18 303 294 46 18 chr10 29516618 29516727 -110800038 - HAL1b LINE L1 -54 1294 1183 372 279 90 75 chr10 29516888 29516980 -110799785 - L1MC4a LINE L1 -158 5963 5874 1769 164 13 13 chr10 29516980 29517291 -110799474 - AluJo SINE Alu -1 311 1 372 279 90 75 chr10 29517291 29517664 -110799101 - L1MC4a LINE L1 -247 5874 5491 622 138 28 0 chr10 29517708 29517817 -110798948 - L1PA16 LINE L1 -4 6162 6051 2327 99 0 0 chr10 29517830 29518122 -110798643 - AluSx SINE Alu -20 292 1 323 302 116 13 chr10 29518173 29518347 -110798418 - L1MC4a LINE L1 -780 5366 5175 21 36 0 0 chr10 29518429 29518457 -110798308 + AT_rich Low_complexity Low_complexity 1 28 0 425 220 93 0 chr10 29518668 29518786 -110797979 + Charlie4 DNA MER1_type 1821 1949 -12 350 259 90 58 chr10 29519200 29519389 -110797376 - L1MC4a LINE L1 -1647 4499 4305 270 246 0 0 chr10 29519555 29519612 -110797153 - L1ME1 LINE L1 -53 6113 6057 1427 179 21 39 chr10 29519612 29519897 -110796868 + AluJo SINE Alu 1 280 -32 255 270 81 45 chr10 29519915 29520026 -110796739 - L1ME1 LINE L1 -96 6070 5956 1248 193 34 0 chr10 29520180 29520419 -110796346 - AluJo SINE Alu -21 291 45 1613 143 29 0 chr10 29520444 29520682 -110796083 + AluSq SINE Alu 3 247 -66 1971 101 4 4 chr10 29520785 29521053 -110795712 - AluSq SINE Alu -45 268 1 1718 157 26 0 chr10 29521053 29521358 -110795407 + L1MC1 LINE L1 6016 6328 -5 2345 77 3 0 chr10 29521492 29521792 -110794973 + AluSc SINE Alu 1 301 -8 24 0 0 0 chr10 29522177 29522201 -110794564 + AT_rich Low_complexity Low_complexity 1 24 0 438 186 39 10 chr10 29522726 29522828 -110793937 + L1MD2 LINE L1 4844 4948 -1198 2257 85 7 0 chr10 29523316 29523621 -110793144 - AluSx SINE Alu -5 307 1 685 227 0 0 chr10 29523689 29523821 -110792944 + AluJ SINE Alu 2 133 -169 539 127 0 13 chr10 29523837 29523916 -110792849 + AluJ SINE Alu 207 284 -28 183 42 0 0 chr10 29524543 29524567 -110792198 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr10 29524642 29524670 -110792095 + AT_rich Low_complexity Low_complexity 1 28 0 2376 82 0 10 chr10 29525040 29525346 -110791419 + AluSx SINE Alu 1 303 -9 466 322 49 6 chr10 29525355 29525538 -110791227 + MIR SINE MIR 57 247 -15 263 256 41 66 chr10 29525837 29525958 -110790807 + L1M4 LINE L1 2716 2833 -3313 1798 174 13 0 chr10 29526051 29526349 -110790416 + AluJb SINE Alu 3 304 -8 2116 218 130 39 chr10 29526566 29526807 -110789958 + L1MD2 LINE L1 5665 5883 -476 1656 155 60 18 chr10 29526807 29527091 -110789674 + AluJo SINE Alu 1 296 -16 2116 218 130 39 chr10 29527091 29527486 -110789279 + L1MD2 LINE L1 5883 6359 0 31 26 0 0 chr10 29527491 29527529 -110789236 + AT_rich Low_complexity Low_complexity 1 38 0 371 306 44 29 chr10 29527535 29527741 -110789024 + L1M4 LINE L1 3191 3399 -2747 305 300 59 27 chr10 29527952 29528172 -110788593 + L1M4 LINE L1 3719 3945 -2201 384 287 149 23 chr10 29528313 29528916 -110787849 + L1M4 LINE L1 4184 4862 -1284 2337 38 14 0 chr10 29528923 29529215 -110787550 + L1PA4 LINE L1 5860 6155 0 1595 318 92 21 chr10 29529279 29530050 -110786715 + L2 LINE L2 834 1659 -1655 2075 201 92 0 chr10 29530050 29530464 -110786301 - MER66A LTR ERV1 0 478 27 184 226 19 0 chr10 29530467 29530520 -110786245 + L2 LINE L2 1643 1696 -1618 340 266 53 41 chr10 29530536 29530700 -110786065 + L2 LINE L2 1797 1962 -1352 698 262 81 28 chr10 29530700 29530948 -110785817 + MIR SINE MIR 2 262 0 1631 259 110 60 chr10 29530952 29531276 -110785489 + L2 LINE L2 1978 2284 -1030 2313 74 3 29 chr10 29531276 29531585 -110785180 + AluSp SINE Alu 1 301 -12 189 0 0 0 chr10 29531590 29531611 -110785154 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1631 259 110 60 chr10 29531611 29531999 -110784766 + L2 LINE L2 2287 2732 -582 800 271 129 70 chr10 29532080 29532467 -110784298 + MLT1J LTR MaLR 102 511 0 333 148 49 0 chr10 29532485 29532546 -110784219 - L1MA7 LINE L1 -88 6203 6140 * 5783 120 50 8 chr10 29532542 29533511 -110783254 - L1MA4A LINE L1 -5 6298 5290 784 252 145 29 chr10 29533511 29534041 -110782724 + L2 LINE L2 2720 3312 -1 310 307 96 60 chr10 29534058 29534309 -110782456 + L1M4 LINE L1 4879 5138 -1008 823 124 22 22 chr10 29534366 29534503 -110782262 + AluJb SINE Alu 3 139 -173 2232 57 0 11 chr10 29534622 29534904 -110781861 + AluY SINE Alu 33 311 0 1510 141 8 8 chr10 29535014 29535255 -110781510 + AluSp SINE Alu 71 311 -2 186 267 33 33 chr10 29535675 29535735 -110781030 + MER5A DNA MER1_type 44 103 -86 381 343 0 0 chr10 29535837 29535983 -110780782 + MERVL LTR ERVL 881 1026 -4459 292 254 0 15 chr10 29535985 29536052 -110780713 + MLT2F LTR ERVL 1 66 -597 7390 110 6 0 chr10 29536153 29537264 -110779501 + L1P LINE L1 2450 3567 -2579 2967 228 85 61 chr10 29537401 29539140 -110777625 - L1M3c LINE L1 -4516 1449 1 2036 123 41 3 chr10 29539144 29539436 -110777329 - AluSx SINE Alu -9 303 1 342 310 60 73 chr10 29539511 29539743 -110777022 - L1ME LINE L1 -546 5575 5347 729 208 56 22 chr10 29540376 29540554 -110776211 + MER53 DNA DNA 1 184 -5 2080 127 3 0 chr10 29541721 29542012 -110774753 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 29542078 29542107 -110774658 + AT_rich Low_complexity Low_complexity 1 29 0 321 305 55 16 chr10 29542222 29542350 -110774415 + L1P LINE L1 3562 3694 -2452 1043 231 65 15 chr10 29542353 29542613 -110774152 + MER82 DNA MER2_type 2 274 -379 642 262 14 0 chr10 29542734 29542875 -110773890 + MER82 DNA MER2_type 511 653 0 372 238 167 52 chr10 29543027 29543237 -110773528 + L1MC/D LINE L1 4586 4819 -1327 706 273 82 107 chr10 29543615 29543824 -110772941 + L1MC/D LINE L1 5325 5538 -632 2030 122 0 0 chr10 29543824 29544103 -110772662 + AluSg1 SINE Alu 21 299 -10 706 273 82 107 chr10 29544103 29544406 -110772359 + L1MC/D LINE L1 5538 5824 -346 27 29 0 0 chr10 29544758 29544792 -110771973 + AT_rich Low_complexity Low_complexity 1 34 0 408 218 138 58 chr10 29545483 29545657 -110771108 + MER5A DNA MER1_type 1 188 -1 230 254 0 0 chr10 29546314 29546373 -110770392 + L1MC5 LINE L1 7831 7889 -72 24 0 0 0 chr10 29546391 29546415 -110770350 + AT_rich Low_complexity Low_complexity 1 24 0 263 256 41 83 chr10 29546612 29546733 -110770032 - MLT1H LTR MaLR 0 549 434 425 231 8 16 chr10 29546884 29547005 -110769760 - MLT1H LTR MaLR -383 166 47 450 0 0 0 chr10 29547590 29547640 -110769125 + (TA)n Simple_repeat Simple_repeat 2 51 0 1349 216 43 77 chr10 29547873 29548331 -110768434 + MLT1H LTR MaLR 3 520 -29 363 208 0 94 chr10 29548877 29548983 -110767782 - MLT1H LTR MaLR 0 549 454 243 133 0 0 chr10 29549648 29549693 -110767072 + (TTTTC)n Simple_repeat Simple_repeat 5 49 0 * 452 121 10 30 chr10 29549689 29549788 -110766977 + (TCC)n Simple_repeat Simple_repeat 3 99 0 1329 174 5 0 chr10 29549813 29550032 -110766733 + AluSg/x SINE Alu 85 304 -6 1382 181 42 34 chr10 29550038 29550303 -110766462 - AluJo SINE Alu -35 277 11 2509 94 48 23 chr10 29551961 29552312 -110764453 + THE1B LTR MaLR 1 360 -4 62 58 0 0 chr10 29552745 29552849 -110763916 + AT_rich Low_complexity Low_complexity 1 104 0 1896 164 7 3 chr10 29552906 29553210 -110763555 + AluJo SINE Alu 6 310 -2 240 324 83 85 chr10 29553789 29554404 -110762361 + L2 LINE L2 2699 3313 0 231 256 87 120 chr10 29554415 29554657 -110762108 - L2 LINE L2 -33 3239 3006 1607 157 24 37 chr10 29554847 29555141 -110761624 + AluJo SINE Alu 3 292 -20 1471 174 58 34 chr10 29555271 29555565 -110761200 + AluJo SINE Alu 2 302 -10 409 279 111 20 chr10 29555570 29555775 -110760990 - L2 LINE L2 -260 3012 2790 701 302 86 33 chr10 29555826 29555981 -110760784 - LTR33 LTR ERVL 0 521 376 1893 106 91 0 chr10 29555981 29556256 -110760509 + AluSg SINE Alu 1 300 -10 701 302 86 33 chr10 29556256 29556554 -110760211 - LTR33 LTR ERVL -145 376 44 1935 129 18 3 chr10 29556626 29556912 -110759853 - L1PB4 LINE L1 -13 6143 5854 218 56 28 0 chr10 29556918 29556954 -110759811 + (TTGTG)n Simple_repeat Simple_repeat 1 37 0 2198 108 3 3 chr10 29556954 29557250 -110759515 - AluSc SINE Alu -13 296 1 2441 122 17 32 chr10 29557250 29557586 -110759179 - L1PB4 LINE L1 -288 5868 5537 2290 112 0 0 chr10 29557586 29557882 -110758883 + AluSx SINE Alu 1 296 -16 2441 122 17 32 chr10 29557882 29557948 -110758817 - L1PB4 LINE L1 -619 5537 5472 743 299 29 17 chr10 29558480 29558721 -110758044 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29558903 29558949 -110757816 - L2 LINE L2 -5 3308 3263 507 180 20 10 chr10 29559940 29560040 -110756725 - MER63C DNA MER1_type -5 925 825 221 156 0 47 chr10 29560040 29560104 -110756661 + A-rich Low_complexity Low_complexity 1 61 0 210 37 0 0 chr10 29560310 29560337 -110756428 + (CAAAAA)n Simple_repeat Simple_repeat 1 27 0 1056 196 52 83 chr10 29560340 29560408 -110756357 - MER63C DNA MER1_type -226 834 765 1674 180 0 17 chr10 29560408 29560702 -110756063 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29560702 29560930 -110755835 - MER63C DNA MER1_type -295 765 546 182 33 67 0 chr10 29560930 29560960 -110755805 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29560960 29560988 -110755777 - MER63C DNA MER1_type -514 546 519 1053 244 107 7 chr10 29560990 29561289 -110755476 + MER58B DNA MER1_type 2 330 -11 1002 203 52 44 chr10 29561282 29561553 -110755212 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29561545 29561596 -110755169 + MER63 DNA MER1_type 480 537 -523 * 7397 195 60 30 chr10 29561649 29564120 -110752645 + L1M4c LINE L1 9 2634 -3748 324 208 99 10 chr10 29564221 29564322 -110752443 + L1M4c LINE L1 2632 2741 -3641 3870 264 202 23 chr10 29564322 29565870 -110750895 + L2 LINE L2 1078 2902 -412 287 250 53 0 chr10 29565896 29565972 -110750793 + L2 LINE L2 3186 3265 -48 2252 131 35 44 chr10 29566041 29566408 -110750357 + THE1B LTR MaLR 1 364 0 195 42 0 0 chr10 29567953 29567977 -110748788 + (T)n Simple_repeat Simple_repeat 1 24 0 379 152 15 0 chr10 29568161 29568227 -110748538 - MADE1 DNA Mariner 0 80 14 2256 231 54 47 chr10 29568227 29568927 -110747838 + L1ME3 LINE L1 5451 6155 -7 207 213 213 0 chr10 29569221 29569282 -110747483 - MER5B DNA MER1_type -101 77 4 556 316 32 0 chr10 29569391 29569549 -110747216 - HAL1 LINE L1 -1824 683 521 1562 202 95 0 chr10 29569549 29569885 -110746880 - MSTB LTR MaLR 0 426 59 2645 136 23 26 chr10 29569885 29570312 -110746453 - MSTB-int LTR MaLR -21 1630 1205 400 340 115 19 chr10 29570307 29570628 -110746137 - HAL1 LINE L1 -2070 437 86 * 554 234 51 0 chr10 29570678 29570815 -110745950 - L1ME3 LINE L1 0 6162 6019 1076 284 30 47 chr10 29570826 29571227 -110745538 - LTR16A LTR ERVL 0 450 57 1061 267 20 0 chr10 29571255 29571551 -110745214 - L1ME3 LINE L1 -151 6011 5710 1737 256 117 30 chr10 29571558 29571951 -110744814 - L1ME3 LINE L1 -2983 3163 2806 2227 116 0 0 chr10 29571951 29572243 -110744522 + AluY SINE Alu 1 292 -19 1737 256 117 30 chr10 29572243 29572692 -110744073 - L1ME3 LINE L1 -3340 2806 2223 1314 219 57 7 chr10 29572993 29573171 -110743594 - AluJo SINE Alu 0 312 112 209 33 33 0 chr10 29573171 29573201 -110743564 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1314 219 57 7 chr10 29573201 29573319 -110743446 - AluJo SINE Alu -200 112 1 1647 164 13 59 chr10 29573774 29574079 -110742686 - AluJo SINE Alu -21 291 1 2029 153 0 3 chr10 29575051 29575352 -110741413 - AluSx SINE Alu -12 300 1 359 352 83 32 chr10 29577146 29577362 -110739403 + L2 LINE L2 2560 2786 -528 919 191 0 6 chr10 29577413 29577570 -110739195 - FRAM SINE Alu -23 153 1 1656 137 8 0 chr10 29577906 29578154 -110738611 - AluSg SINE Alu 0 310 61 342 0 0 0 chr10 29578663 29578701 -110738064 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 249 327 28 9 chr10 29578721 29578828 -110737937 + L1ME3A LINE L1 5989 6097 -73 228 35 0 0 chr10 29580083 29580112 -110736653 + (GA)n Simple_repeat Simple_repeat 2 30 0 354 319 70 5 chr10 29581126 29581311 -110735454 + L2 LINE L2 3045 3241 -31 186 43 0 0 chr10 29581327 29581350 -110735415 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 894 176 29 12 chr10 29581435 29581605 -110735160 + FRAM SINE Alu 1 173 -3 1856 159 3 0 chr10 29582044 29582334 -110734431 + AluJo SINE Alu 1 291 -21 367 380 28 0 chr10 29582416 29582595 -110734170 + L3 LINE CR1 323 506 -1071 197 211 19 0 chr10 29582668 29582720 -110734045 + L3 LINE CR1 639 691 -886 1294 222 73 22 chr10 29582729 29583044 -110733721 + MER2 DNA MER2_type 15 345 0 403 391 9 5 chr10 29583053 29583265 -110733500 + L3 LINE CR1 695 907 -670 508 289 139 27 chr10 29583281 29583575 -110733190 + L3 LINE CR1 1117 1443 -134 2160 133 128 16 chr10 29585312 29585695 -110731070 + MSTA LTR MaLR 1 426 -2 2404 98 0 3 chr10 29588087 29588393 -110728372 + AluY SINE Alu 2 306 -5 2273 122 0 0 chr10 29589254 29589565 -110727200 - AluSx SINE Alu 0 312 2 213 260 87 120 chr10 29589753 29589995 -110726770 + L2 LINE L2 3006 3239 -33 258 328 78 80 chr10 29590006 29590621 -110726144 - L2 LINE L2 0 3313 2699 1931 165 7 0 chr10 29591200 29591503 -110725262 - AluJo SINE Alu -2 310 6 62 58 0 0 chr10 29591560 29591664 -110725101 + AT_rich Low_complexity Low_complexity 1 104 0 2509 94 48 23 chr10 29592097 29592448 -110724317 - THE1B LTR MaLR -4 360 1 5988 213 64 43 chr10 29594164 29596399 -110720366 + L1MB2 LINE L1 2648 5154 -2411 1346 142 47 39 chr10 29596399 29596632 -110720133 + MER46A DNA MER2_type 1 235 -1 5988 213 64 43 chr10 29596632 29597590 -110719175 + L1MB2 LINE L1 5154 6090 -1475 1361 220 37 3 chr10 29597874 29598055 -110718710 - AluJb SINE Alu -2 310 114 189 0 0 0 chr10 29598055 29598076 -110718689 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1361 220 37 3 chr10 29598076 29598189 -110718576 - AluJb SINE Alu -198 114 6 32284 108 14 56 chr10 29598621 29598636 -110718129 - L1PA7 LINE L1 0 6154 6140 2660 129 21 0 chr10 29598636 29599017 -110717748 - L1PA16 LINE L1 -9 6157 5769 32284 108 14 56 chr10 29599017 29605421 -110711344 - L1PA7 LINE L1 -14 6140 13 1472 100 91 0 chr10 29605421 29605641 -110711124 - L1PA16 LINE L1 -381 5785 5546 213 39 0 0 chr10 29605894 29605920 -110710845 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 273 308 98 42 chr10 29606551 29606694 -110710071 - L2 LINE L2 -5 3308 3158 1679 192 14 83 chr10 29606703 29607035 -110709730 - MLT2D LTR ERVL -2 412 117 1988 153 0 7 chr10 29607035 29607343 -110709422 + AluSx SINE Alu 1 306 -6 1679 192 14 83 chr10 29607343 29607453 -110709312 - MLT2D LTR ERVL -297 117 1 1797 198 177 62 chr10 29608407 29608967 -110707798 - MLT1E3 LTR MaLR 0 624 1 1353 203 25 60 chr10 29609004 29609485 -110707280 + L1MB2 LINE L1 6438 6897 -688 * 1389 230 55 28 chr10 29609480 29609880 -110706885 + L1ME1 LINE L1 5751 6161 -5 23 0 0 0 chr10 29610128 29610151 -110706614 + AT_rich Low_complexity Low_complexity 1 23 0 623 219 4 8 chr10 29610334 29610485 -110706280 + L1MB2 LINE L1 7088 7241 -349 827 118 79 8 chr10 29610488 29610615 -110706150 + AluJo SINE Alu 1 136 -176 1123 199 103 10 chr10 29610618 29610910 -110705855 + L1MB2 LINE L1 7232 7550 -40 226 173 0 115 chr10 29611219 29611271 -110705494 + Alu SINE Alu 2 47 -253 553 237 94 57 chr10 29611305 29611689 -110705076 - L1MEd LINE L1 -4867 1252 855 356 204 0 3 chr10 29611709 29611778 -110704987 + MSTB LTR MaLR 1 67 -361 28 29 0 0 chr10 29611801 29611836 -110704929 + AT_rich Low_complexity Low_complexity 1 35 0 409 255 10 10 chr10 29612133 29612231 -110704534 + MER5B DNA MER1_type 21 118 -60 1711 200 100 13 chr10 29613183 29613563 -110703202 + MSTB LTR MaLR 14 426 0 1037 232 42 32 chr10 29613669 29614153 -110702612 - MLT1E LTR MaLR -9 584 1 576 277 83 32 chr10 29614352 29614605 -110702160 - MLT1J LTR MaLR -8 503 238 186 43 0 0 chr10 29614827 29614850 -110701915 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 781 116 27 0 chr10 29614867 29614979 -110701786 - AluJb SINE Alu -189 123 9 2021 146 7 0 chr10 29615000 29615302 -110701463 - AluSq SINE Alu -9 304 1 37 0 0 0 chr10 29615450 29615487 -110701278 + AT_rich Low_complexity Low_complexity 1 37 0 1857 228 68 20 chr10 29616046 29616503 -110700262 + MLT1D LTR MaLR 1 479 -26 27 62 0 0 chr10 29616660 29616708 -110700057 + AT_rich Low_complexity Low_complexity 1 48 0 1724 194 3 0 chr10 29617102 29617406 -110699359 + AluJo SINE Alu 1 305 -7 38 68 0 0 chr10 29618133 29618206 -110698559 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr10 29618499 29618538 -110698227 + AT_rich Low_complexity Low_complexity 1 39 0 336 176 0 0 chr10 29618795 29618867 -110697898 - L1MA4A LINE L1 -230 6073 5998 446 272 27 82 chr10 29618899 29619156 -110697609 - L2 LINE L2 -837 2477 2235 393 198 55 11 chr10 29619295 29619386 -110697379 + MER94 DNA DNA 6 100 -34 1574 179 24 31 chr10 29619684 29619825 -110696940 + AluJo SINE Alu 1 141 -171 2418 73 0 19 chr10 29619825 29620139 -110696626 + AluY SINE Alu 1 308 -3 1574 179 24 31 chr10 29620139 29620288 -110696477 + AluJo SINE Alu 141 289 -23 610 315 12 12 chr10 29620422 29620673 -110696092 + L1ME2 LINE L1 5698 5948 -216 1099 154 0 0 chr10 29620685 29620854 -110695911 - AluSg/x SINE Alu -9 303 135 1639 61 0 5 chr10 29620856 29621052 -110695713 - AluSq SINE Alu -118 195 1 1723 192 0 0 chr10 29621409 29621747 -110695018 - AluJb SINE Alu 0 346 9 1014 109 15 0 chr10 29621750 29621887 -110694878 - AluJo SINE Alu -173 139 1 492 208 69 0 chr10 29622858 29622954 -110693811 + MLT1D LTR MaLR 10 112 -393 2007 106 60 42 chr10 29622954 29623285 -110693480 + THE1B LTR MaLR 2 338 -26 403 86 103 0 chr10 29623311 29623369 -110693396 + THE1B LTR MaLR 301 364 0 * 1980 175 56 41 chr10 29623369 29623762 -110693003 + MLT1D LTR MaLR 107 505 0 283 251 209 16 chr10 29624203 29624390 -110692375 + HAL1 LINE L1 816 1038 -1469 1880 101 27 0 chr10 29624690 29624947 -110691818 + L1PA10 LINE L1 5905 6168 0 569 273 7 0 chr10 29624954 29625104 -110691661 - L1ME LINE L1 -3312 2903 2753 1362 152 14 0 chr10 29625104 29625314 -110691451 + AluJo SINE Alu 91 303 -9 534 241 107 74 chr10 29625431 29625862 -110690903 - L1ME LINE L1 -4510 1886 1442 * 640 269 113 9 chr10 29625834 29626154 -110690611 - L1ME LINE L1 -5070 1135 783 2037 172 27 64 chr10 29626194 29626373 -110690392 + MSTD LTR MaLR 1 185 -211 2378 104 0 0 chr10 29626373 29626680 -110690085 - AluSx SINE Alu 0 312 6 2037 172 27 64 chr10 29626680 29626908 -110689857 + MSTD LTR MaLR 185 393 -3 2177 144 48 67 chr10 29627071 29627570 -110689195 + L1MB1 LINE L1 5666 6163 -5 2576 132 277 80 chr10 29627576 29627904 -110688861 + L1MCa LINE L1 1033 1295 -5131 243 61 0 0 chr10 29627904 29627937 -110688828 + (CA)n Simple_repeat Simple_repeat 1 33 0 2576 132 277 80 chr10 29627937 29628405 -110688360 + L1MCa LINE L1 1295 1992 -4434 1696 169 29 4 chr10 29628405 29628684 -110688081 + AluJb SINE Alu 1 286 -26 848 203 34 0 chr10 29628701 29628849 -110687916 + FRAM SINE Alu 4 156 -20 327 171 110 0 chr10 29628850 29628932 -110687833 + L1MCa LINE L1 1979 2069 -4357 5816 215 109 27 chr10 29628954 29629869 -110686896 + L1MB8 LINE L1 3403 4241 -1937 247 114 0 0 chr10 29629869 29629904 -110686861 + tRNA-Gly-GGA tRNA tRNA 7 41 -34 5816 215 109 27 chr10 29629904 29631295 -110685470 + L1MB8 LINE L1 4241 5955 -223 325 125 18 47 chr10 29631300 29631370 -110685395 + AluSp SINE Alu 120 181 -122 2520 108 68 5 chr10 29631522 29631892 -110684873 + MSTA LTR MaLR 36 428 0 1976 148 75 87 chr10 29632542 29632685 -110684080 - Tigger2a DNA MER2_type -2275 433 290 2088 133 7 3 chr10 29632685 29632993 -110683772 + AluSx SINE Alu 1 309 -3 1976 148 75 87 chr10 29632993 29633287 -110683478 - Tigger2a DNA MER2_type -2418 290 1 598 295 96 71 chr10 29633451 29634337 -110682428 + L2 LINE L2 2315 3230 -42 962 189 123 16 chr10 29634982 29635226 -110681539 - LOR1a LTR ERV1 0 497 228 2323 87 55 29 chr10 29635272 29635619 -110681146 - THE1B LTR MaLR -8 356 1 443 200 35 9 chr10 29636109 29636224 -110680541 + LTR33A LTR ERVL 405 522 -1 21 0 0 0 chr10 29636417 29636438 -110680327 + AT_rich Low_complexity Low_complexity 1 21 0 2349 89 0 3 chr10 29636521 29636825 -110679940 + AluY SINE Alu 1 303 -8 1194 121 0 28 chr10 29636825 29637007 -110679758 + AluSg/x SINE Alu 134 310 -2 351 352 62 6 chr10 29637266 29637316 -110679449 - MER5A DNA MER1_type 0 189 143 216 0 0 0 chr10 29637316 29637340 -110679425 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 351 352 62 6 chr10 29637340 29637468 -110679297 - MER5A DNA MER1_type -46 143 1 531 0 0 0 chr10 29637528 29637587 -110679178 + (TG)n Simple_repeat Simple_repeat 1 59 0 257 0 30 0 chr10 29637586 29637619 -110679146 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 413 148 0 0 chr10 29637825 29637886 -110678879 - L1PB1 LINE L1 -252 5899 5839 455 122 0 0 chr10 29637886 29637959 -110678806 + L1PB1 LINE L1 6076 6149 -2 2108 135 0 3 chr10 29639334 29639638 -110677127 - AluSx SINE Alu -9 303 1 2099 129 0 0 chr10 29640105 29640399 -110676366 - AluSx SINE Alu -4 308 15 1896 160 0 10 chr10 29640865 29641165 -110675600 + AluJb SINE Alu 3 299 -13 1772 174 14 0 chr10 29641477 29641827 -110674938 - L1MB4 LINE L1 -29 6151 5797 2182 132 0 0 chr10 29641841 29642145 -110674620 - AluSx SINE Alu -8 304 1 234 209 58 93 chr10 29644172 29644258 -110672507 + L2 LINE L2 3226 3308 -5 711 253 114 62 chr10 29644404 29644957 -110671808 + HAL1b LINE L1 310 891 -457 198 0 0 0 chr10 29645746 29645768 -110670997 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 270 0 0 0 chr10 29645767 29645797 -110670968 + (CA)n Simple_repeat Simple_repeat 1 30 0 253 188 0 14 chr10 29645797 29645866 -110670899 + L1ME3A LINE L1 5242 5309 -837 5257 144 33 19 chr10 29645942 29646970 -110669795 + L1MA6 LINE L1 5258 6299 -1 1306 177 113 11 chr10 29646975 29647241 -110669524 + AluJb SINE Alu 1 293 -19 1052 244 61 43 chr10 29647350 29647793 -110668972 + L1ME3A LINE L1 5437 5887 -283 396 21 0 0 chr10 29647790 29647838 -110668927 + L1P LINE L1 5233 5280 -866 * 230 79 0 26 chr10 29648329 29648367 -110668398 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1377 216 107 5 chr10 29648382 29648767 -110667998 - Zaphod DNA AcHobo 0 4031 3608 359 284 37 0 chr10 29649200 29649362 -110667403 + (TA)n Simple_repeat Simple_repeat 1 168 0 267 118 29 49 chr10 29649369 29649471 -110667294 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 47 19 0 0 chr10 29649471 29649525 -110667240 + AT_rich Low_complexity Low_complexity 1 54 0 369 216 54 0 chr10 29649525 29649692 -110667073 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 42 0 0 chr10 29649718 29649742 -110667023 + (TA)n Simple_repeat Simple_repeat 1 24 0 278 50 0 0 chr10 29650137 29650177 -110666588 + L1MA1 LINE L1 6263 6302 0 210 377 14 0 chr10 29650319 29650388 -110666377 + L2 LINE L2 3157 3226 -46 520 224 34 7 chr10 29651810 29651957 -110664808 - MLT1B LTR MaLR -48 342 192 273 119 0 0 chr10 29651975 29652017 -110664748 + (GA)n Simple_repeat Simple_repeat 2 43 0 1959 122 0 0 chr10 29652095 29652358 -110664407 - AluSx SINE Alu -15 297 35 503 150 106 9 chr10 29652374 29652487 -110664278 - MLT1B LTR MaLR -266 124 1 700 254 45 69 chr10 29652616 29652821 -110663944 - MER58B DNA MER1_type -2090 330 135 2755 75 5 24 chr10 29652821 29653192 -110663573 + THE1B LTR MaLR 1 364 0 700 254 45 69 chr10 29653192 29653320 -110663445 - MER58B DNA MER1_type -2285 135 5 563 106 73 8 chr10 29653652 29653775 -110662990 + CT-rich Low_complexity Low_complexity 5 135 0 352 318 46 29 chr10 29655086 29655259 -110661506 - MIR SINE MIR -40 222 47 424 315 39 39 chr10 29656480 29656661 -110660104 - MIR3 SINE MIR -21 187 41 22 0 0 0 chr10 29657672 29657694 -110659071 + AT_rich Low_complexity Low_complexity 1 22 0 312 294 63 56 chr10 29659796 29660048 -110656717 + L1ME LINE L1 5083 5336 -810 316 265 105 25 chr10 29660184 29660384 -110656381 + L1ME LINE L1 5566 5781 -340 21 82 0 0 chr10 29660519 29660568 -110656197 + AT_rich Low_complexity Low_complexity 1 49 0 204 325 0 0 chr10 29661398 29661438 -110655327 - MIR SINE MIR -138 70 31 444 270 158 21 chr10 29662105 29662314 -110654451 + MIR SINE MIR 20 250 -12 319 305 16 53 chr10 29662902 29663092 -110653673 + MIR SINE MIR 47 229 -33 2176 106 26 3 chr10 29663273 29663575 -110653190 - AluSx SINE Alu -3 309 1 21 36 0 0 chr10 29663940 29663968 -110652797 + AT_rich Low_complexity Low_complexity 1 28 0 276 287 0 11 chr10 29664075 29664162 -110652603 - L1MC/D LINE L1 -2021 5787 5702 1064 129 0 47 chr10 29664322 29664492 -110652273 + AluSx SINE Alu 1 162 -150 23 68 0 0 chr10 29664942 29664986 -110651779 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 29666329 29666379 -110650386 + AT_rich Low_complexity Low_complexity 1 50 0 260 246 83 99 chr10 29667149 29667295 -110649470 + MIR SINE MIR 6 146 -62 1835 157 3 20 chr10 29667295 29667601 -110649164 + AluJo SINE Alu 1 301 -11 260 246 83 99 chr10 29667601 29667660 -110649105 + MIR SINE MIR 146 204 -4 25 51 0 0 chr10 29668168 29668207 -110648558 + AT_rich Low_complexity Low_complexity 1 39 0 1667 105 24 4 chr10 29668308 29668585 -110648180 + AluSg SINE Alu 30 311 0 803 247 0 0 chr10 29668694 29668864 -110647901 + MIR SINE MIR 72 241 -21 1940 156 53 8 chr10 29668991 29669350 -110647415 + THE1C LTR MaLR 1 375 0 222 280 137 17 chr10 29669391 29669537 -110647228 - MER5A DNA MER1_type -27 151 4 21 0 0 0 chr10 29669640 29669661 -110647104 + AT_rich Low_complexity Low_complexity 1 21 0 3307 148 9 12 chr10 29669724 29670293 -110646472 - L1PA16 LINE L1 0 6166 5600 299 295 137 27 chr10 29671018 29671201 -110645564 - MIR SINE MIR -59 203 1 1430 202 41 3 chr10 29671732 29672024 -110644741 - AluJo SINE Alu -7 305 3 1543 163 42 49 chr10 29672822 29673129 -110643636 + AluJo SINE Alu 8 312 0 1071 99 17 0 chr10 29673136 29673308 -110643457 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 21 36 0 0 chr10 29673394 29673422 -110643343 + AT_rich Low_complexity Low_complexity 1 28 0 2012 146 3 16 chr10 29673733 29674049 -110642716 + AluSx SINE Alu 1 312 0 6469 25 4 9 chr10 29674470 29675244 -110641521 + L1PA4 LINE L1 5386 6155 0 277 289 74 15 chr10 29675332 29675467 -110641298 + L1ME3A LINE L1 6020 6162 -8 * 317 289 59 40 chr10 29675463 29675767 -110640998 + L1MC/D LINE L1 3914 4223 -1923 1051 263 13 0 chr10 29676449 29676685 -110640080 - MIR SINE MIR -22 240 2 523 273 120 52 chr10 29676845 29677270 -110639495 + L1MC/D LINE L1 5260 5713 -2095 2432 97 0 0 chr10 29677274 29677584 -110639181 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 29678041 29678064 -110638701 + (CAT)n Simple_repeat Simple_repeat 3 25 0 357 264 0 0 chr10 29678950 29679022 -110637743 + L2 LINE L2 3201 3272 0 296 372 9 0 chr10 29679078 29679191 -110637574 + MIR SINE MIR 34 147 -115 345 283 14 67 chr10 29680400 29680546 -110636219 - MIR SINE MIR -66 142 20 2378 51 3 51 chr10 29681973 29682286 -110634479 - AluY SINE Alu -13 298 1 2221 124 36 30 chr10 29682507 29682869 -110633896 - THE1B LTR MaLR 0 364 1 1110 156 113 40 chr10 29684165 29684466 -110632299 + MER33 DNA MER1_type 2 324 0 1139 133 0 57 chr10 29684803 29685013 -110631752 + MER2 DNA MER2_type 1 198 -147 2275 121 0 0 chr10 29685078 29685384 -110631381 - AluSx SINE Alu -6 306 1 249 169 85 17 chr10 29685407 29685466 -110631299 + MER2 DNA MER2_type 267 329 -16 2113 110 7 3 chr10 29685530 29685821 -110630944 - AluSc SINE Alu -17 292 1 201 208 21 0 chr10 29685843 29685891 -110630874 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 734 198 148 16 chr10 29686831 29687074 -110629691 - ORSL DNA AcHobo 0 275 1 4896 147 20 3 chr10 29687498 29687690 -110629075 + L1MB3 LINE L1 5284 5471 -712 315 0 0 0 chr10 29687690 29687725 -110629040 + (CA)n Simple_repeat Simple_repeat 2 36 0 4896 147 20 3 chr10 29687725 29688410 -110628355 + L1MB3 LINE L1 5471 6176 -7 314 234 50 57 chr10 29688594 29688616 -110628149 - L1MC4a LINE L1 -1877 5931 5910 1866 173 0 13 chr10 29688616 29688922 -110627843 + AluJo SINE Alu 1 302 -10 314 234 50 57 chr10 29688922 29689040 -110627725 - L1MC4a LINE L1 -1898 5910 5792 21 36 0 0 chr10 29689367 29689395 -110627370 + AT_rich Low_complexity Low_complexity 1 28 0 269 298 55 61 chr10 29689497 29690319 -110626446 - L1P LINE L1 -1086 5060 4233 2143 117 0 3 chr10 29690363 29690654 -110626111 - AluSx SINE Alu -22 290 1 275 250 29 0 chr10 29691264 29691332 -110625433 - MIR SINE MIR -13 249 180 1524 65 0 0 chr10 29692321 29692507 -110624258 + L1PA6 LINE L1 5969 6154 0 234 91 0 0 chr10 29693575 29693608 -110623157 + (A)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr10 29693893 29693916 -110622849 + AT_rich Low_complexity Low_complexity 1 23 0 6937 119 58 38 chr10 29694215 29694388 -110622377 + Tigger3b DNA MER2_type 1 169 -2859 2020 113 3 7 chr10 29694388 29694697 -110622068 + AluSx SINE Alu 1 308 0 6937 119 58 38 chr10 29694697 29694862 -110621903 + Tigger3b DNA MER2_type 169 329 -2699 2277 100 3 7 chr10 29694862 29695161 -110621604 + AluSx SINE Alu 1 298 -14 6937 119 58 38 chr10 29695161 29695664 -110621101 + Tigger3b DNA MER2_type 329 821 -2207 230 81 27 0 chr10 29695664 29695701 -110621064 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 6937 119 58 38 chr10 29695701 29695775 -110620990 + Tigger3b DNA MER2_type 821 892 -2136 1575 137 53 114 chr10 29695775 29695922 -110620843 - MER1B DNA MER1_type -2374 336 182 2274 105 0 16 chr10 29695922 29696235 -110620530 + AluSg SINE Alu 1 308 -2 1575 137 53 114 chr10 29696235 29696445 -110620320 - MER1B DNA MER1_type -2528 182 1 6937 119 58 38 chr10 29696445 29696731 -110620034 + Tigger3b DNA MER2_type 892 1230 -1 1839 182 0 3 chr10 29697255 29697552 -110619213 + AluJo SINE Alu 1 296 -16 211 219 0 0 chr10 29697553 29697594 -110619171 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 238 258 217 0 chr10 29697604 29697724 -110619041 - L1ME4a LINE L1 -1 6120 5975 1169 131 66 22 chr10 29697985 29698168 -110618597 - MER1B DNA MER1_type -23 316 126 434 339 87 0 chr10 29698168 29698386 -110618379 - MIR SINE MIR -13 249 13 2567 49 0 7 chr10 29698667 29698973 -110617792 - AluY SINE Alu -7 304 1 627 78 0 52 chr10 29699563 29699678 -110617087 + (GGAA)n Simple_repeat Simple_repeat 2 110 0 213 39 0 0 chr10 29699679 29699705 -110617060 + (GAGAA)n Simple_repeat Simple_repeat 3 28 0 2242 109 7 0 chr10 29699707 29700000 -110616765 - AluSx SINE Alu -17 295 1 1047 95 12 30 chr10 29700233 29700401 -110616364 - AluSg/x SINE Alu -17 295 131 686 286 31 22 chr10 29702405 29702632 -110614133 - MIR SINE MIR -30 232 4 2206 98 3 7 chr10 29703262 29703558 -110613207 + AluSg SINE Alu 1 295 -15 313 142 3 42 chr10 29703558 29703635 -110613130 - L1M1 LINE L1 -621 5535 5459 743 299 29 17 chr10 29704157 29704398 -110612367 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29704580 29704626 -110612139 - L2 LINE L2 -5 3308 3263 551 160 20 10 chr10 29705617 29705717 -110611048 - MER63C DNA MER1_type -4 926 826 191 35 0 35 chr10 29705719 29705748 -110611017 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 29705759 29705780 -110610985 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 29705985 29706009 -110610756 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1056 196 52 83 chr10 29706016 29706084 -110610681 - MER63C DNA MER1_type -226 835 766 1674 180 0 17 chr10 29706084 29706378 -110610387 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29706378 29706606 -110610159 - MER63C DNA MER1_type -295 766 547 182 33 67 0 chr10 29706606 29706636 -110610129 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29706636 29706664 -110610101 - MER63C DNA MER1_type -514 547 520 1053 244 107 7 chr10 29706666 29706965 -110609800 + MER58B DNA MER1_type 2 330 -11 1016 203 52 44 chr10 29706958 29707229 -110609536 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29707221 29707272 -110609493 + MER63 DNA MER1_type 480 537 -523 * 7425 195 60 30 chr10 29707325 29709795 -110606970 + L1M4c LINE L1 9 2634 -3748 330 198 99 10 chr10 29709896 29709997 -110606768 + L1M4c LINE L1 2632 2741 -3641 1343 307 109 19 chr10 29709997 29710538 -110606227 + L2 LINE L2 1078 1667 -1647 323 252 101 22 chr10 29710538 29710677 -110606088 + L2 LINE L2 1842 1991 -1323 21 0 0 0 chr10 29711376 29711397 -110605368 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 29712760 29712783 -110603982 + AT_rich Low_complexity Low_complexity 1 23 0 840 176 62 23 chr10 29712922 29713098 -110603667 + MER5A DNA MER1_type 3 185 -4 346 319 117 52 chr10 29714263 29714758 -110602007 + L1M2 LINE L1 387 913 -5936 342 115 0 0 chr10 29716692 29716744 -110600021 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 29717853 29717874 -110598891 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 29717979 29718003 -110598762 + GC_rich Low_complexity Low_complexity 1 24 0 339 65 0 0 chr10 29718964 29719010 -110597755 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 197 16 0 chr10 29720281 29720342 -110596423 - MSTD LTR MaLR -334 62 1 202 384 0 0 chr10 29720624 29720710 -110596055 + MER5A DNA MER1_type 45 130 -59 796 151 52 135 chr10 29720763 29721088 -110595677 - Charlie7 DNA MER1_type 0 2612 2315 2431 100 25 0 chr10 29721090 29721556 -110595209 - L1P4 LINE L1 -569 5594 5121 762 248 62 16 chr10 29721572 29721830 -110594935 - L1M1 LINE L1 -4289 3276 3007 1188 240 175 16 chr10 29721845 29722279 -110594486 - Charlie7 DNA MER1_type -390 2222 1720 245 303 98 8 chr10 29722617 29722749 -110594016 - MIR SINE MIR 0 262 119 25 31 0 0 chr10 29723160 29723192 -110593573 + AT_rich Low_complexity Low_complexity 1 32 0 385 273 61 68 chr10 29723516 29724078 -110592687 - L1MC5 LINE L1 -397 7411 7003 310 232 14 0 chr10 29724763 29724901 -110591864 + (CA)n Simple_repeat Simple_repeat 2 141 0 298 288 25 0 chr10 29724936 29725016 -110591749 - MER81 DNA DNA -32 82 1 420 180 255 0 chr10 29726269 29726408 -110590357 - MER5A DNA MER1_type -6 183 4 2159 216 6 33 chr10 29726418 29726928 -110589837 + L1MA9 LINE L1 5778 6273 -39 1437 164 57 18 chr10 29727226 29727507 -110589258 - AluJo SINE Alu -20 292 1 1306 229 109 68 chr10 29727842 29728295 -110588470 - MLT1J LTR MaLR -3 508 32 1029 247 18 18 chr10 29728295 29728518 -110588247 + MER58A DNA MER1_type 2 224 0 1306 229 109 68 chr10 29728518 29728552 -110588213 - MLT1J LTR MaLR -479 32 1 2205 141 0 0 chr10 29728553 29728866 -110587899 - AluSq SINE Alu 0 313 1 3048 171 56 0 chr10 29729268 29729807 -110586958 - LTR31 LTR ERV1 0 619 51 1647 204 10 16 chr10 29730396 29730709 -110586056 - AluJo SINE Alu -1 311 1 2146 81 153 16 chr10 29731571 29731891 -110584874 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr10 29732040 29732065 -110584700 + AT_rich Low_complexity Low_complexity 1 25 0 33 43 0 0 chr10 29732258 29732305 -110584460 + AT_rich Low_complexity Low_complexity 1 47 0 342 273 0 34 chr10 29732737 29732825 -110583940 + L2 LINE L2 3005 3089 -224 213 39 0 0 chr10 29732836 29732862 -110583903 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 629 202 17 6 chr10 29732886 29733064 -110583701 + CT-rich Low_complexity Low_complexity 1 180 0 1628 190 16 16 chr10 29733257 29733567 -110583198 - AluJo SINE Alu -2 310 1 320 286 136 13 chr10 29733586 29733740 -110583025 + L2 LINE L2 3119 3291 -22 2758 221 58 28 chr10 29733747 29734560 -110582205 - L1MCa LINE L1 -5279 891 46 414 216 0 0 chr10 29734838 29734926 -110581839 - L1PA16 LINE L1 0 6166 6079 4212 148 19 10 chr10 29734945 29735806 -110580959 - L1PB4 LINE L1 -176 5980 5116 711 254 99 38 chr10 29735828 29736270 -110580495 - MLT1J LTR MaLR 0 511 1 278 67 22 0 chr10 29736535 29736580 -110580185 + (TG)n Simple_repeat Simple_repeat 2 47 0 1461 166 92 87 chr10 29736657 29737048 -110579717 - MSTD LTR MaLR -3 393 1 275 247 71 12 chr10 29737760 29737845 -110578920 - MIR SINE MIR -6 256 167 4229 158 24 3 chr10 29738513 29739209 -110577556 - MER50 LTR ERV1 -23 711 1 1544 177 8 71 chr10 29739913 29740280 -110576485 - MER2 DNA MER2_type 0 344 1 2052 112 35 3 chr10 29740729 29741016 -110575749 - AluSx SINE Alu -16 296 1 244 226 71 36 chr10 29741099 29741183 -110575582 + MLT1H LTR MaLR 51 137 -412 231 210 16 48 chr10 29741678 29741740 -110575025 - MIR SINE MIR -113 149 90 208 259 0 0 chr10 29741891 29741945 -110574820 + A-rich Low_complexity Low_complexity 1 54 0 352 310 80 21 chr10 29743986 29744225 -110572540 - MLT1L LTR MaLR -10 605 353 330 78 0 169 chr10 29744398 29744441 -110572324 + L1MA8 LINE L1 6039 6065 -226 1640 145 4 0 chr10 29744441 29744682 -110572083 - AluSx SINE Alu -42 270 29 330 78 0 169 chr10 29744682 29744715 -110572050 + L1MA8 LINE L1 6065 6102 -189 1349 124 0 0 chr10 29744832 29745018 -110571747 + AluSg/x SINE Alu 111 296 -14 1926 127 3 45 chr10 29745871 29746185 -110570580 + AluSx SINE Alu 1 301 -11 206 355 36 9 chr10 29748477 29748587 -110568178 + L2 LINE L2 3160 3272 0 324 0 0 0 chr10 29750685 29750721 -110566044 + (TG)n Simple_repeat Simple_repeat 2 37 0 523 332 21 5 chr10 29752863 29753056 -110563709 + MIR3 SINE MIR 9 204 -4 225 298 51 72 chr10 29753406 29753688 -110563077 - L1M4 LINE L1 -1101 5045 4780 3152 96 7 0 chr10 29753688 29754134 -110562631 - L1PA10 LINE L1 -10 6158 5710 225 298 51 72 chr10 29754134 29754422 -110562343 - L1M4 LINE L1 -1366 4780 4487 512 315 16 63 chr10 29754768 29755336 -110561429 - L1M4 LINE L1 -2098 4048 3508 1695 160 34 17 chr10 29755479 29755773 -110560992 - AluJo SINE Alu -13 299 1 26 34 0 51 chr10 29756693 29756752 -110560013 + AT_rich Low_complexity Low_complexity 1 56 0 213 39 0 0 chr10 29757244 29757270 -110559495 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1721 220 127 17 chr10 29758120 29758639 -110558126 - MLT1E2 LTR MaLR 0 626 51 962 141 0 0 chr10 29759025 29759167 -110557598 - AluJb SINE Alu -2 310 169 536 283 73 20 chr10 29759235 29759482 -110557283 - MIR SINE MIR 0 262 3 466 187 22 0 chr10 29759791 29759882 -110556883 - MIR SINE MIR -32 230 138 180 0 0 0 chr10 29761446 29761466 -110555299 + (T)n Simple_repeat Simple_repeat 1 20 0 1079 129 9 58 chr10 29761925 29762093 -110554672 + L1MA8 LINE L1 6077 6252 -39 1772 174 3 3 chr10 29762093 29762375 -110554390 + AluSx SINE Alu 1 282 -30 443 18 0 18 chr10 29762378 29762435 -110554330 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1079 129 9 58 chr10 29762435 29762486 -110554279 + L1MA8 LINE L1 6254 6289 -2 1308 217 3 32 chr10 29762534 29762843 -110553922 - MLT1F1 LTR MaLR 0 567 268 246 210 0 0 chr10 29762837 29762899 -110553866 - MLT1F1 LTR MaLR -232 335 274 * 322 165 25 16 chr10 29763010 29763112 -110553653 - MLT1F1 LTR MaLR -222 371 274 263 140 0 0 chr10 29763182 29763232 -110553533 - MLT1F1 LTR MaLR -244 323 274 * 334 156 0 20 chr10 29763201 29763300 -110553465 - MLT1F1 LTR MaLR -232 335 264 263 185 0 15 chr10 29763267 29763332 -110553433 - MLT1F1 LTR MaLR -236 331 268 * 283 169 0 0 chr10 29763358 29763417 -110553348 - MLT1F1 LTR MaLR -232 335 277 246 155 17 0 chr10 29763420 29763478 -110553287 - MLT1F1 LTR MaLR -232 335 277 * 574 249 79 0 chr10 29763450 29763615 -110553150 - MLT1F1 LTR MaLR -232 335 158 372 164 0 0 chr10 29763669 29763730 -110553035 - 7SK RNA RNA 0 193 133 294 190 17 0 chr10 29763779 29763837 -110552928 - MLT1F1 LTR MaLR -508 59 1 446 294 128 41 chr10 29763925 29764269 -110552496 - L1M4 LINE L1 -2166 3980 3607 22 35 0 0 chr10 29764988 29765017 -110551748 + AT_rich Low_complexity Low_complexity 1 29 0 303 240 0 13 chr10 29765019 29765094 -110551671 - L1ME4a LINE L1 -6 6115 6042 618 237 0 0 chr10 29765122 29765286 -110551479 - FLAM_A SINE Alu 0 164 1 2200 148 16 82 chr10 29766058 29766202 -110550563 - L1MB7 LINE L1 0 6184 6032 1976 136 18 0 chr10 29766202 29766482 -110550283 - AluSx SINE Alu -27 285 1 2200 148 16 82 chr10 29766482 29766851 -110549914 - L1MB7 LINE L1 -152 6032 5705 1335 196 82 7 chr10 29766864 29767144 -110549621 - AluJo SINE Alu -11 301 1 1175 140 9 88 chr10 29767572 29767800 -110548965 + AluJo SINE Alu 87 296 -16 1557 36 5 0 chr10 29768019 29768211 -110548554 - L1PA5 LINE L1 0 6154 5962 458 258 33 82 chr10 29768287 29768593 -110548172 - L1ME LINE L1 -298 5823 5533 363 228 18 90 chr10 29768902 29768963 -110547802 - L1MA10 LINE L1 0 6334 6274 734 231 30 41 chr10 29768963 29769569 -110547196 - L1ME1 LINE L1 -44 6122 5423 248 275 56 70 chr10 29769627 29769769 -110546996 + MIR SINE MIR 73 212 -50 274 271 52 42 chr10 29769819 29769915 -110546850 + MIR3 SINE MIR 81 177 -31 231 204 0 0 chr10 29769966 29770015 -110546750 + (TA)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr10 29770212 29770233 -110546532 + AT_rich Low_complexity Low_complexity 1 21 0 422 275 162 27 chr10 29771054 29771425 -110545340 + MLT1H LTR MaLR 22 442 -107 636 271 6 18 chr10 29771862 29772032 -110544733 + MER5B DNA MER1_type 1 168 -10 279 93 0 0 chr10 29772457 29772500 -110544265 + MADE1 DNA Mariner 2 44 -36 342 304 36 7 chr10 29772513 29772651 -110544114 + MIR SINE MIR 120 261 -1 210 360 96 22 chr10 29772680 29772858 -110543907 - L3 LINE CR1 -155 1422 1232 1863 171 45 11 chr10 29772949 29773324 -110543441 - MLT1B LTR MaLR -2 388 1 262 208 0 99 chr10 29773492 29773593 -110543172 + LTR67 LTR ERVL 459 549 -8 2404 116 33 8 chr10 29773885 29774248 -110542517 + THE1C LTR MaLR 1 372 -3 632 183 50 0 chr10 29774443 29774590 -110542175 + MLT1J LTR MaLR 3 118 -328 316 249 183 6 chr10 29774681 29774850 -110541915 + MLT1J LTR MaLR 313 511 0 229 26 26 26 chr10 29775177 29775216 -110541549 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 189 271 29 71 chr10 29775417 29775487 -110541278 - L2 LINE L2 -2819 495 429 225 200 0 20 chr10 29775791 29775841 -110540924 + CT-rich Low_complexity Low_complexity 2 50 0 826 137 0 0 chr10 29775848 29775965 -110540800 - FLAM_C SINE Alu -16 117 1 329 239 37 0 chr10 29777827 29777936 -110538829 - L1M4 LINE L1 -3180 2966 2854 26 0 0 0 chr10 29778245 29778271 -110538494 + AT_rich Low_complexity Low_complexity 1 26 0 1925 115 79 0 chr10 29778274 29778553 -110538212 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr10 29778553 29778576 -110538189 + (TA)n Simple_repeat Simple_repeat 2 24 0 248 189 27 14 chr10 29778595 29778669 -110538096 - L1M4 LINE L1 -3653 2493 2419 352 290 197 25 chr10 29778887 29779166 -110537599 + MLT1L LTR MaLR 141 467 -148 350 272 169 26 chr10 29779496 29779691 -110537074 + L1ME4a LINE L1 5694 5916 -205 212 256 122 0 chr10 29780293 29780375 -110536390 + MIR SINE MIR 100 191 -71 528 244 83 71 chr10 29781343 29781556 -110535209 + MLT1K LTR MaLR 315 533 -55 2431 88 0 3 chr10 29781556 29781861 -110534904 + AluSx SINE Alu 1 304 -8 528 244 83 71 chr10 29781861 29781901 -110534864 + MLT1K LTR MaLR 533 571 -17 1002 224 153 25 chr10 29783088 29783480 -110533285 + MLT1H LTR MaLR 71 549 0 1464 166 59 4 chr10 29785865 29786118 -110530647 + AluJo SINE Alu 40 306 -6 758 206 17 11 chr10 29787056 29787231 -110529534 + MLT1B LTR MaLR 215 390 0 27759 63 1 12 chr10 29787879 29792334 -110524431 - L1PA5 LINE L1 -157 5997 1591 609 299 69 18 chr10 29792620 29792837 -110523928 - MIR SINE MIR -24 238 11 1719 169 18 0 chr10 29793142 29793421 -110523344 - AluJo SINE Alu -14 298 15 2100 138 3 7 chr10 29793565 29793869 -110522896 - AluSx SINE Alu -9 303 1 576 250 7 0 chr10 29794394 29794542 -110522223 - L1ME LINE L1 -448 5722 5574 321 312 164 12 chr10 29795128 29795378 -110521387 - L2 LINE L2 -125 3188 2901 1336 178 0 9 chr10 29795378 29795603 -110521162 + AluJb SINE Alu 83 305 -7 2335 89 16 0 chr10 29795659 29795963 -110520802 + AluSx SINE Alu 2 310 -2 276 280 172 13 chr10 29796318 29796475 -110520290 - MIR SINE MIR 0 262 81 27 29 0 0 chr10 29797257 29797291 -110519474 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr10 29797351 29797380 -110519385 + AT_rich Low_complexity Low_complexity 1 29 0 241 203 0 51 chr10 29798991 29799070 -110517695 + (TTAA)n Simple_repeat Simple_repeat 2 76 0 275 316 137 0 chr10 29799460 29799599 -110517166 + MIR SINE MIR 32 189 -73 200 295 16 0 chr10 29799606 29799667 -110517098 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 2253 155 7 59 chr10 29799667 29799879 -110516886 + Tigger2a DNA MER2_type 1 178 -2530 1479 122 5 5 chr10 29799879 29800101 -110516664 - AluSq SINE Alu -6 307 86 2253 155 7 59 chr10 29800101 29800346 -110516419 + Tigger2a DNA MER2_type 178 434 0 279 236 205 37 chr10 29801253 29801414 -110515351 + MLT1J LTR MaLR 2 189 -322 249 309 100 0 chr10 29801738 29801848 -110514917 - MER91A DNA MER1_type -71 125 5 * 340 365 103 28 chr10 29801847 29802168 -110514597 + L2 LINE L2 2923 3267 -5 23 0 0 0 chr10 29802888 29802911 -110513854 + AT_rich Low_complexity Low_complexity 1 23 0 255 31 0 0 chr10 29803274 29803306 -110513459 + (TG)n Simple_repeat Simple_repeat 1 32 0 863 254 71 29 chr10 29804179 29804419 -110512346 + MIR SINE MIR 9 258 -4 286 388 47 8 chr10 29807609 29807867 -110508898 + L2 LINE L2 1830 2097 -1217 254 68 45 0 chr10 29808366 29808410 -110508355 + T-rich Low_complexity Low_complexity 1 46 0 5536 97 12 4 chr10 29808410 29809223 -110507542 - L1PA10 LINE L1 -21 6147 5328 2246 117 3 0 chr10 29809275 29809573 -110507192 - AluSx SINE Alu -13 299 1 2268 132 52 45 chr10 29810324 29810747 -110506018 + MSTB1 LTR MaLR 5 430 -2 350 247 66 96 chr10 29810896 29811062 -110505703 + MIR SINE MIR 28 188 -74 592 350 27 48 chr10 29811526 29811820 -110504945 - L2 LINE L2 -8 3264 2977 259 268 12 49 chr10 29811919 29812001 -110504764 + MER5A DNA MER1_type 48 126 -63 183 364 65 22 chr10 29812056 29812240 -110504525 - L2 LINE L2 -434 2880 2689 402 335 46 0 chr10 29812296 29812448 -110504317 + MIR SINE MIR 104 262 0 413 357 6 6 chr10 29812586 29812757 -110504008 + C-rich Low_complexity Low_complexity 2 172 0 183 80 0 0 chr10 29812938 29812963 -110503802 + (CAAAC)n Simple_repeat Simple_repeat 2 26 0 255 305 39 39 chr10 29813636 29813682 -110503083 + L2 LINE L2 3182 3227 -86 3152 209 32 2 chr10 29813682 29814315 -110502450 - MER82 DNA MER2_type -1 652 1 255 305 39 39 chr10 29814315 29814396 -110502369 + L2 LINE L2 3226 3309 -4 267 233 12 23 chr10 29814408 29814494 -110502271 + (CATATA)n Simple_repeat Simple_repeat 3 87 0 205 389 26 9 chr10 29814855 29814968 -110501797 + MIR SINE MIR 6 121 -87 503 289 22 33 chr10 29815246 29815426 -110501339 + L3 LINE CR1 1391 1568 -9 2169 118 0 0 chr10 29815949 29816236 -110500529 + AluSx SINE Alu 1 287 -25 1974 155 0 3 chr10 29816774 29817071 -110499694 - AluJo SINE Alu -16 296 1 225 0 0 0 chr10 29817379 29817404 -110499361 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1247 86 0 0 chr10 29818285 29818437 -110498328 + AluSg/x SINE Alu 149 300 -12 224 239 0 28 chr10 29818629 29818700 -110498065 + GA-rich Low_complexity Low_complexity 4 72 0 586 136 48 24 chr10 29819638 29819763 -110497002 - MER33 DNA MER1_type 0 363 236 2321 134 50 24 chr10 29819763 29820180 -110496585 - Tigger2a DNA MER2_type 0 434 7 649 206 82 11 chr10 29820188 29820260 -110496505 - MER33 DNA MER1_type -2387 198 133 1935 99 0 0 chr10 29820260 29820513 -110496252 - AluSq SINE Alu -17 296 44 649 206 82 11 chr10 29820513 29820624 -110496141 - MER33 DNA MER1_type -2452 133 2 2560 214 87 36 chr10 29822061 29822461 -110494304 - L1ME1 LINE L1 -9 6226 5848 201 39 0 0 chr10 29822461 29822487 -110494278 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1915 150 0 0 chr10 29822487 29822767 -110493998 - AluSx SINE Alu -32 280 1 2560 214 87 36 chr10 29822767 29823592 -110493173 - L1ME1 LINE L1 -386 5849 4938 455 252 24 39 chr10 29823636 29823842 -110492923 - L1ME1 LINE L1 -3874 2522 2320 2102 105 0 4 chr10 29823846 29824151 -110492614 - AluSc SINE Alu 0 307 4 16798 56 2 0 chr10 29824251 29826531 -110490234 - L1P LINE L1 -2921 3225 942 6459 105 1 0 chr10 29826538 29827480 -110489285 + L1P LINE L1 11 953 -5193 227 320 33 33 chr10 29827910 29828032 -110488733 + L2 LINE L2 3143 3264 -8 223 247 41 0 chr10 29830347 29830444 -110486321 + (TA)n Simple_repeat Simple_repeat 1 101 0 805 308 159 10 chr10 29830776 29831166 -110485599 - L3 LINE CR1 -287 1290 843 463 226 37 92 chr10 29831381 29831449 -110485316 + MER5B DNA MER1_type 1 71 -107 1906 184 11 35 chr10 29831449 29831823 -110484942 + MLT1A1 LTR MaLR 1 365 0 463 226 37 92 chr10 29831823 29831918 -110484847 + MER5B DNA MER1_type 71 155 -23 518 301 104 6 chr10 29831970 29832133 -110484632 + MIR SINE MIR 58 236 -26 1681 155 65 25 chr10 29832332 29832610 -110484155 + AluJo SINE Alu 1 289 -23 393 280 0 93 chr10 29832788 29832857 -110483908 + MER5B DNA MER1_type 2 76 -102 1547 186 22 11 chr10 29832857 29833132 -110483633 + AluJb SINE Alu 3 280 -32 582 15 0 0 chr10 29833136 29833203 -110483562 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 393 280 0 93 chr10 29833203 29833321 -110483444 + MER5B DNA MER1_type 79 176 -2 5051 228 52 45 chr10 29833430 29835204 -110481561 + L1M4 LINE L1 15 1817 -4829 682 291 126 27 chr10 29835747 29836191 -110480574 + L1M4c LINE L1 539 1026 -5358 2280 115 0 3 chr10 29836195 29836500 -110480265 + AluSc SINE Alu 1 304 -5 258 138 0 0 chr10 29836504 29836562 -110480203 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 199 138 20 chr10 29836671 29837029 -110479736 + L1ME2 LINE L1 5236 5642 -522 324 279 165 0 chr10 29837026 29837184 -110479581 + L1ME2 LINE L1 5935 6118 -46 * 728 171 0 0 chr10 29838457 29838580 -110478185 + FRAM SINE Alu 1 40 0 228 297 93 22 chr10 29838908 29839090 -110477675 + HAL1b LINE L1 272 466 -882 1889 148 44 0 chr10 29839140 29839480 -110477285 + AluJb SINE Alu 1 353 0 272 213 38 12 chr10 29839526 29839606 -110477159 + HAL1b LINE L1 559 640 -708 2260 132 0 0 chr10 29839879 29840189 -110476576 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 29840368 29840390 -110476375 + AT_rich Low_complexity Low_complexity 1 22 0 620 333 93 9 chr10 29840424 29840844 -110475921 + L1M4c LINE L1 2383 2837 -3545 1609 191 18 4 chr10 29840924 29841197 -110475568 + AluJo SINE Alu 5 281 -31 1018 15 31 0 chr10 29841200 29841330 -110475435 + (GAAA)n Simple_repeat Simple_repeat 1 134 0 532 300 45 66 chr10 29841542 29842626 -110474139 + L1M4c LINE L1 3126 4180 -2202 1655 199 11 0 chr10 29842626 29842902 -110473863 - AluJo SINE Alu -25 287 9 532 300 45 66 chr10 29842902 29843142 -110473623 + L1M4c LINE L1 4180 4423 -1959 893 138 0 0 chr10 29843147 29843277 -110473488 + AluSg/x SINE Alu 172 301 -11 813 239 62 19 chr10 29843301 29843510 -110473255 - MER58A DNA MER1_type 0 224 7 331 299 66 86 chr10 29843516 29843793 -110472972 + L1M4c LINE L1 4475 4746 -1636 482 169 15 100 chr10 29843799 29843929 -110472836 + L1MD3 LINE L1 7863 7981 -14 227 244 0 33 chr10 29844506 29844596 -110472169 + (CGGGG)n Simple_repeat Simple_repeat 5 91 0 204 190 35 0 chr10 29845553 29845611 -110471154 + T-rich Low_complexity Low_complexity 6 65 0 299 281 0 0 chr10 29846151 29846233 -110470532 - MIR3 SINE MIR -14 194 113 308 310 99 41 chr10 29846632 29846732 -110470033 + L1M4 LINE L1 2843 2936 -3210 1632 157 27 34 chr10 29846732 29847025 -110469740 + AluJb SINE Alu 1 291 -21 308 310 99 41 chr10 29847025 29847317 -110469448 + L1M4 LINE L1 2936 3258 -2888 29 28 0 0 chr10 29847833 29847869 -110468896 + AT_rich Low_complexity Low_complexity 1 36 0 2423 93 0 0 chr10 29848618 29848929 -110467836 - AluY SINE Alu 0 311 1 512 309 63 61 chr10 29849491 29849953 -110466812 + L2 LINE L2 1898 2360 -954 333 339 17 34 chr10 29849956 29850074 -110466691 - L2 LINE L2 0 3272 3157 513 285 87 16 chr10 29850686 29850928 -110465837 - MIR SINE MIR 0 262 4 424 211 53 23 chr10 29851010 29851143 -110465622 - HAL1b LINE L1 -43 1305 1169 728 307 64 29 chr10 29851202 29851717 -110465048 - HAL1b LINE L1 -441 907 375 433 299 170 44 chr10 29851724 29852072 -110464693 - HAL1b LINE L1 -1009 1410 12 1260 170 143 30 chr10 29852152 29852417 -110464348 + AluJo SINE Alu 1 295 -17 957 64 40 0 chr10 29852418 29852543 -110464222 + AluY SINE Alu 178 307 -4 231 36 0 0 chr10 29853011 29853039 -110463726 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 876 135 21 0 chr10 29853756 29853897 -110462868 - MER47A DNA MER2_type 0 366 223 1388 170 5 9 chr10 29853897 29854121 -110462644 - AluJo SINE Alu -84 228 6 1191 133 28 0 chr10 29854121 29854332 -110462433 - MER47A DNA MER2_type -149 217 1 532 275 149 58 chr10 29854474 29854856 -110461909 + L2 LINE L2 2897 3313 0 1552 189 33 19 chr10 29854864 29855171 -110461594 + AluJo SINE Alu 1 311 -1 246 370 31 52 chr10 29855199 29855488 -110461277 - L2 LINE L2 -465 2849 2567 2290 97 60 20 chr10 29855813 29856162 -110460603 + THE1B LTR MaLR 1 363 -1 287 214 8 0 chr10 29856321 29856452 -110460313 + (TA)n Simple_repeat Simple_repeat 2 133 0 328 226 294 7 chr10 29857272 29857418 -110459347 - MIR SINE MIR -71 191 4 27 29 0 0 chr10 29857534 29857568 -110459197 + AT_rich Low_complexity Low_complexity 1 34 0 315 268 0 0 chr10 29857743 29857840 -110458925 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 802 134 0 0 chr10 29859279 29859398 -110457367 - AluSg/x SINE Alu 0 312 194 1709 178 72 35 chr10 29859852 29859896 -110456869 + MLT1B LTR MaLR 1 42 -348 1929 108 35 14 chr10 29859896 29860182 -110456583 - AluSq SINE Alu -11 302 11 1709 178 72 35 chr10 29860182 29860513 -110456252 + MLT1B LTR MaLR 42 390 0 1998 130 14 0 chr10 29860548 29860832 -110455933 - AluSx SINE Alu -3 309 22 1692 154 0 80 chr10 29861387 29861725 -110455040 + AluJo SINE Alu 1 311 -1 290 156 0 101 chr10 29862149 29862348 -110454417 + (TA)n Simple_repeat Simple_repeat 2 180 0 1812 178 7 10 chr10 29863159 29863468 -110453297 + AluJo SINE Alu 3 310 -2 180 0 0 0 chr10 29863552 29863572 -110453193 + (T)n Simple_repeat Simple_repeat 1 20 0 2440 177 9 2 chr10 29864040 29864486 -110452279 + MER6 DNA MER2_type 417 865 0 243 218 45 100 chr10 29864662 29864772 -110451993 - L1MC4 LINE L1 -15 8027 7924 247 296 12 37 chr10 29864935 29865016 -110451749 - L2 LINE L2 -4 3309 3231 2293 112 0 25 chr10 29865462 29865783 -110450982 + AluSq SINE Alu 1 313 0 301 219 51 0 chr10 29867369 29867506 -110449259 + (TA)n Simple_repeat Simple_repeat 1 144 0 1367 170 14 11 chr10 29867634 29867917 -110448848 - L1MA4 LINE L1 -11 6289 6006 984 173 0 0 chr10 29868558 29868708 -110448057 + FRAM SINE Alu 2 151 -25 216 0 0 0 chr10 29870018 29870042 -110446723 + (T)n Simple_repeat Simple_repeat 1 24 0 550 299 128 79 chr10 29870412 29871068 -110445697 - L2 LINE L2 -5 3267 2575 1015 167 0 6 chr10 29871827 29871989 -110444776 - AluSc SINE Alu -14 295 135 315 287 87 58 chr10 29872141 29872889 -110443876 + L1 LINE L1 4268 5037 -1109 1955 142 21 15 chr10 29872991 29873534 -110443231 - L1MA4 LINE L1 -640 5660 5119 270 136 17 0 chr10 29873537 29873596 -110443169 + L1PB4 LINE L1 6096 6155 -1 869 168 30 50 chr10 29873606 29873808 -110442957 + L1 LINE L1 4854 5051 -1095 499 336 36 81 chr10 29874628 29874832 -110441933 - L2 LINE L2 -2067 1247 1066 363 68 68 0 chr10 29874832 29874891 -110441874 + L1PB4 LINE L1 6093 6155 -1 499 336 36 81 chr10 29874891 29875070 -110441695 - L2 LINE L2 -2248 1066 881 27 0 0 0 chr10 29875592 29875619 -110441146 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr10 29876678 29876709 -110440056 + AT_rich Low_complexity Low_complexity 1 31 0 2218 113 0 31 chr10 29877700 29878058 -110438707 + AluSx SINE Alu 1 348 0 1315 206 32 0 chr10 29878701 29879020 -110437745 + AluJo SINE Alu 1 328 0 273 265 60 0 chr10 29879223 29879306 -110437459 - HsTC2 DNA Tc2 -11 1887 1800 1352 209 43 0 chr10 29879420 29879698 -110437067 - AluJb SINE Alu -22 290 1 300 245 31 71 chr10 29879721 29879819 -110436946 + L1ME4a LINE L1 5735 5828 -1980 311 264 110 0 chr10 29879899 29879990 -110436775 + L1ME4a LINE L1 5997 6097 -24 677 221 61 17 chr10 29880090 29880129 -110436636 - MER3 DNA MER1_type -9 200 164 1729 167 44 3 chr10 29880129 29880422 -110436343 - AluSx SINE Alu -7 305 1 677 221 61 17 chr10 29880422 29880563 -110436202 - MER3 DNA MER1_type -45 164 12 351 206 92 8 chr10 29880888 29881019 -110435746 - Charlie2a DNA MER1_type -5 2857 2716 521 201 35 30 chr10 29881021 29881190 -110435575 - Charlie2a DNA MER1_type -1220 1642 1473 190 132 38 0 chr10 29881271 29881324 -110435441 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 371 254 0 26 chr10 29881329 29881443 -110435322 - Charlie2b DNA MER1_type -2116 666 556 240 289 21 31 chr10 29881444 29881541 -110435224 - Charlie2b DNA MER1_type -2473 309 214 231 281 0 0 chr10 29881579 29881643 -110435122 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 332 333 213 21 chr10 29881699 29882450 -110434315 + L2 LINE L2 1755 2649 -665 22 0 0 0 chr10 29883229 29883251 -110433514 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 29883756 29883778 -110432987 + AT_rich Low_complexity Low_complexity 1 22 0 23617 120 12 77 chr10 29883848 29888564 -110428201 + L1P LINE L1 9 4421 -1725 931 137 0 0 chr10 29889197 29889336 -110427429 + AluSg/x SINE Alu 169 307 -3 568 308 52 15 chr10 29889362 29889690 -110427075 - L1M4 LINE L1 -1264 4882 4543 7103 52 7 2 chr10 29890116 29891857 -110424908 + L1PA7 LINE L1 4407 6153 -1 222 324 59 39 chr10 29891983 29892085 -110424680 - MIR3 SINE MIR -23 185 82 2241 130 0 0 chr10 29894401 29894708 -110422057 + AluSx SINE Alu 1 307 -5 1782 153 11 14 chr10 29895339 29895658 -110421107 + AluJo SINE Alu 1 318 0 2686 249 5 9 chr10 29895662 29896315 -110420450 + MER82 DNA MER2_type 1 653 0 233 263 74 21 chr10 29896653 29896748 -110420017 + L2 LINE L2 3164 3263 -50 2260 106 12 0 chr10 29897997 29898317 -110418448 - L1PA15 LINE L1 -6 6159 5836 3858 122 16 2 chr10 29898317 29899032 -110417733 + L1PA15 LINE L1 5109 5830 -335 637 286 41 27 chr10 29899085 29899481 -110417284 - L1MC4 LINE L1 -624 7418 7018 284 225 0 11 chr10 29899526 29899615 -110417150 + (TA)n Simple_repeat Simple_repeat 1 88 0 1003 255 34 45 chr10 29899620 29900086 -110416679 + L1ME LINE L1 1038 1498 -4928 1907 190 9 3 chr10 29900094 29900436 -110416329 - MLT1A1 LTR MaLR -1 364 21 587 255 17 11 chr10 29900442 29900620 -110416145 + L1ME LINE L1 1684 2117 -4310 275 274 128 10 chr10 29901259 29901334 -110415431 + L1MD3 LINE L1 6439 6530 -1465 2674 123 33 26 chr10 29901334 29901764 -110415001 + Tigger2a DNA MER2_type 1 433 -1 275 274 128 10 chr10 29901764 29901790 -110414975 + L1MD3 LINE L1 6530 6552 -1443 * 1695 260 43 11 chr10 29901782 29902501 -110414264 + L1ME LINE L1 2793 3534 -2892 689 181 36 22 chr10 29902654 29902792 -110413973 - AluJo SINE Alu -60 252 113 279 269 254 21 chr10 29902894 29903087 -110413678 - HAL1 LINE L1 -1778 729 492 346 284 55 0 chr10 29903388 29903497 -110413268 + L1ME LINE L1 5809 5923 -478 343 271 181 30 chr10 29903758 29903924 -110412841 - HAL1 LINE L1 -2265 242 52 31 0 0 0 chr10 29904362 29904393 -110412372 + AT_rich Low_complexity Low_complexity 1 31 0 779 300 56 46 chr10 29905478 29905995 -110410770 - ERVL LTR ERVL -450 5314 4793 341 248 248 13 chr10 29906177 29906326 -110410439 + L2 LINE L2 3130 3313 0 192 287 78 52 chr10 29907186 29907301 -110409464 + L3 LINE CR1 1197 1314 -263 22 0 0 0 chr10 29907484 29907506 -110409259 + AT_rich Low_complexity Low_complexity 1 22 0 2642 253 53 43 chr10 29908224 29909036 -110407729 + L1ME1 LINE L1 22 1045 -5495 2117 128 3 0 chr10 29909036 29909332 -110407433 + AluSx SINE Alu 1 297 -15 2642 253 53 43 chr10 29909332 29909817 -110406948 + L1ME1 LINE L1 1045 1524 -5016 1982 122 25 0 chr10 29911247 29911573 -110405192 + AluSx SINE Alu 1 333 0 23 54 0 0 chr10 29912063 29912100 -110404665 + AT_rich Low_complexity Low_complexity 1 37 0 2109 121 0 26 chr10 29912105 29912461 -110404304 + AluSx SINE Alu 1 312 0 2755 254 51 20 chr10 29913037 29914547 -110402218 + L1ME1 LINE L1 1732 3255 -3285 396 0 0 0 chr10 29914636 29914680 -110402085 + (CATA)n Simple_repeat Simple_repeat 2 45 0 470 188 0 0 chr10 29914680 29914765 -110402000 + AluSq/x SINE Alu 46 130 -182 5332 182 69 15 chr10 29914765 29916575 -110400190 - L1PA8 LINE L1 -12 6160 4248 5945 235 80 28 chr10 29916686 29918707 -110398058 + L1ME1 LINE L1 3468 5664 -896 2164 113 0 22 chr10 29918707 29919025 -110397740 + AluY SINE Alu 1 311 0 5945 235 80 28 chr10 29919025 29919649 -110397116 + L1ME1 LINE L1 5664 6254 -306 1968 209 62 66 chr10 29920884 29921463 -110395302 + L1ME3A LINE L1 5509 6085 -85 392 241 48 0 chr10 29921548 29921693 -110395072 + L1MD3 LINE L1 7842 7993 -2 821 165 0 0 chr10 29921868 29921989 -110394776 - FLAM_C SINE Alu -22 121 1 2483 229 76 40 chr10 29923457 29924230 -110392535 - L1ME2 LINE L1 0 6164 5359 1804 134 64 40 chr10 29924230 29924559 -110392206 - MER1B DNA MER1_type 0 337 1 2483 229 76 40 chr10 29924559 29924592 -110392173 - L1ME2 LINE L1 -805 5359 5329 477 163 23 0 chr10 29924596 29924682 -110392083 - AluSg/x SINE Alu -14 296 209 647 290 48 17 chr10 29925390 29925621 -110391144 + MIR SINE MIR 9 246 -16 2244 114 0 0 chr10 29926601 29926898 -110389867 - AluSx SINE Alu -15 297 1 204 125 0 0 chr10 29926944 29926976 -110389789 + (TG)n Simple_repeat Simple_repeat 1 32 0 478 371 36 46 chr10 29927594 29927982 -110388783 - L2 LINE L2 -60 3212 2829 186 103 0 0 chr10 29928480 29928509 -110388256 + (CAG)n Simple_repeat Simple_repeat 1 29 0 588 265 136 54 chr10 29928965 29929297 -110387468 - MLT1J LTR MaLR 0 511 153 962 167 172 0 chr10 29929352 29929538 -110387227 - AluJo SINE Alu -8 304 87 686 273 86 15 chr10 29929552 29930045 -110386720 - L1MEc LINE L1 -3686 2529 2027 572 206 69 28 chr10 29930246 29930425 -110386340 - L1MA10 LINE L1 0 6334 5988 281 246 0 0 chr10 29930450 29930511 -110386254 - L1MEc LINE L1 -6300 96 36 1006 267 58 64 chr10 29930585 29931605 -110385160 - L1MEd LINE L1 -4688 1622 561 704 287 107 21 chr10 29931640 29932185 -110384580 - L1MC4a LINE L1 -722 5432 5284 278 111 16 159 chr10 29932867 29932930 -110383835 - MER2 DNA MER2_type -12 333 280 1362 220 10 30 chr10 29932961 29933261 -110383504 + AluJo SINE Alu 1 294 -18 1922 130 36 20 chr10 29934219 29934340 -110382425 + AluSx SINE Alu 1 119 -193 186 71 0 0 chr10 29934340 29934368 -110382397 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1922 130 36 20 chr10 29934368 29934547 -110382218 + AluSx SINE Alu 119 306 -6 468 288 36 39 chr10 29934704 29934985 -110381780 + L1ME LINE L1 5533 5812 -309 2180 109 3 3 chr10 29934985 29935278 -110381487 - AluSc SINE Alu -14 295 3 662 255 68 29 chr10 29935285 29935586 -110381179 - L1M4c LINE L1 -4870 1443 777 370 276 77 0 chr10 29936478 29936659 -110380106 - LTR33A LTR ERVL -2 521 327 284 234 191 37 chr10 29936697 29936885 -110379880 - LTR33A LTR ERVL -305 218 2 253 250 52 43 chr10 29937478 29937594 -110379171 - MLT1K LTR MaLR -65 523 407 26 30 0 0 chr10 29938420 29938453 -110378312 + AT_rich Low_complexity Low_complexity 1 33 0 268 306 298 8 chr10 29939151 29939272 -110377493 + MER91A DNA MER1_type 19 174 -22 24 0 0 0 chr10 29939781 29939805 -110376960 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 29939952 29939974 -110376791 + AT_rich Low_complexity Low_complexity 1 22 0 803 152 0 0 chr10 29940010 29940135 -110376630 - FRAM SINE Alu -10 166 42 332 161 18 0 chr10 29940135 29940191 -110376574 + MSTB1 LTR MaLR 271 327 -105 372 184 58 29 chr10 29940314 29940488 -110376277 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 567 320 71 0 chr10 29940812 29941009 -110375756 - MIR SINE MIR 0 262 52 359 331 143 15 chr10 29941074 29941340 -110375425 - HAL1 LINE L1 -756 1751 1452 2066 112 42 68 chr10 29941400 29941785 -110374980 - THE1C LTR MaLR 0 375 1 1094 246 138 13 chr10 29942373 29942771 -110373994 - MER20B DNA MER1_type -29 754 307 1168 162 13 40 chr10 29943757 29943985 -110372780 - AluJb SINE Alu -8 304 83 185 179 0 26 chr10 29944255 29944294 -110372471 + L2 LINE L2 3217 3254 -18 25 37 0 0 chr10 29944423 29944450 -110372315 + GC_rich Low_complexity Low_complexity 1 27 0 574 234 14 95 chr10 29944575 29944797 -110371968 + MER3 DNA MER1_type 6 209 0 1709 168 3 32 chr10 29944915 29945224 -110371541 - AluJo SINE Alu -12 300 1 359 375 85 9 chr10 29945726 29945950 -110370815 + MIR SINE MIR 3 243 -19 614 74 0 0 chr10 29946257 29946352 -110370413 + L1MA7 LINE L1 6196 6290 -1 2207 94 0 10 chr10 29946361 29946649 -110370116 + AluSq SINE Alu 1 340 0 435 18 18 0 chr10 29946649 29946704 -110370061 + (TAA)n Simple_repeat Simple_repeat 2 180 0 22 0 0 0 chr10 29946935 29946957 -110369808 + AT_rich Low_complexity Low_complexity 1 22 0 524 184 41 0 chr10 29947290 29947388 -110369377 - MER99 DNA DNA -725 103 2 203 231 77 88 chr10 29947393 29947484 -110369281 - MER91A DNA MER1_type -104 92 3 250 152 0 45 chr10 29947710 29947776 -110368989 + CT-rich Low_complexity Low_complexity 4 66 0 * 319 629 12 0 chr10 29947765 29947932 -110368833 + C-rich Low_complexity Low_complexity 4 172 0 592 170 0 0 chr10 29947944 29948038 -110368727 - AluJb SINE Alu -215 97 4 561 265 84 50 chr10 29948171 29948409 -110368356 + MIR SINE MIR 2 247 -15 1441 195 84 22 chr10 29951499 29951868 -110364897 - L2 LINE L2 -701 2613 2222 1373 194 114 19 chr10 29952162 29952523 -110364242 - MSTD LTR MaLR -1 395 1 2693 16 7 3 chr10 29952596 29952905 -110363860 - AluY SINE Alu -1 310 1 595 275 60 30 chr10 29953173 29953373 -110363392 - MIR SINE MIR -49 213 8 2127 126 17 0 chr10 29955684 29955986 -110360779 + AluSq SINE Alu 1 307 -6 232 281 16 0 chr10 29956750 29956814 -110359951 - MIR SINE MIR -10 252 188 180 111 0 0 chr10 29956903 29956930 -110359835 + (T)n Simple_repeat Simple_repeat 1 27 0 1124 152 15 108 chr10 29957032 29957301 -110359464 - AluJo SINE Alu -65 247 4 255 356 175 6 chr10 29957711 29957871 -110358894 - MIR SINE MIR -61 201 15 3098 141 29 4 chr10 29958885 29959402 -110357363 + L1PB4 LINE L1 5614 6143 -13 2155 112 3 3 chr10 29959714 29960017 -110356748 + AluSx SINE Alu 1 303 -9 269 258 136 77 chr10 29960043 29960264 -110356501 + L2 LINE L2 786 1019 -2295 1743 337 114 24 chr10 29960589 29962307 -110354458 - L2 LINE L2 -723 2591 720 318 267 39 16 chr10 29962333 29962395 -110354370 - L1M4 LINE L1 -1082 5064 5005 2078 153 15 6 chr10 29962395 29962735 -110354030 + MER61A LTR ERV1 1 343 0 318 267 39 16 chr10 29962735 29962850 -110353915 - L1M4 LINE L1 -1141 5005 4887 276 347 78 33 chr10 29962931 29963173 -110353592 + L2 LINE L2 2639 2891 -423 206 341 85 23 chr10 29963458 29963634 -110353131 - L2 LINE L2 -214 3058 2872 22 35 0 0 chr10 29966804 29966833 -110349932 + AT_rich Low_complexity Low_complexity 1 29 0 248 252 28 37 chr10 29967265 29967372 -110349393 + L1ME4a LINE L1 5513 5618 -503 433 286 187 14 chr10 29967428 29967711 -110349054 + L1ME4a LINE L1 5774 6105 -16 21 0 0 0 chr10 29969300 29969321 -110347444 + AT_rich Low_complexity Low_complexity 1 21 0 2219 102 0 3 chr10 29969362 29969657 -110347108 - AluSg SINE Alu -16 294 1 325 269 115 0 chr10 29969657 29969761 -110347004 - MIR SINE MIR -44 218 103 812 256 75 34 chr10 29969884 29970204 -110346561 + MER46C DNA MER2_type 1 333 -5 211 197 115 16 chr10 29970213 29970274 -110346491 - MIR SINE MIR -70 192 126 1960 154 0 0 chr10 29970289 29970568 -110346197 + AluSx SINE Alu 1 279 -33 350 252 274 0 chr10 29970665 29970800 -110345965 + MIR SINE MIR 81 252 -10 894 234 92 107 chr10 29971778 29972441 -110344324 + LTR50 LTR ERVL 20 672 -123 39 22 0 0 chr10 29973771 29973817 -110342948 + AT_rich Low_complexity Low_complexity 1 46 0 450 152 0 0 chr10 29973824 29973890 -110342875 - AluSg/x SINE Alu -26 283 218 906 118 77 72 chr10 29973997 29974192 -110342573 - L1PA16 LINE L1 -247 5919 5724 1251 169 78 13 chr10 29974285 29974516 -110342249 - AluJo SINE Alu -13 299 54 606 263 105 19 chr10 29974532 29974798 -110341967 - HERVL LTR ERVL -1230 4424 4136 211 227 59 118 chr10 29974801 29974920 -110341845 - L3 LINE CR1 -77 1500 1389 1254 111 53 0 chr10 29975190 29975397 -110341368 - L1MB3 LINE L1 -3 6180 5963 441 265 57 62 chr10 29976639 29976914 -110339851 + LTR16A LTR ERVL 147 438 -12 429 353 56 15 chr10 29976925 29977194 -110339571 + L2 LINE L2 2623 2902 -412 240 220 20 0 chr10 29977269 29977319 -110339446 + L2 LINE L2 3263 3313 0 1615 166 24 104 chr10 29977812 29977988 -110338777 + MLT1B LTR MaLR 1 190 -200 1700 147 45 49 chr10 29977988 29978274 -110338491 + AluJb SINE Alu 1 285 -27 1615 166 24 104 chr10 29978274 29978518 -110338247 + MLT1B LTR MaLR 190 387 -3 2468 124 0 8 chr10 29978608 29978988 -110337777 - MER1A DNA MER1_type 0 529 153 352 333 0 16 chr10 29979328 29979454 -110337311 - L2 LINE L2 -23 3290 3167 868 179 0 73 chr10 29979465 29979644 -110337121 + FRAM SINE Alu 1 166 0 1826 115 0 95 chr10 29980304 29980608 -110336157 + AluSx SINE Alu 1 275 -37 2093 183 52 7 chr10 29980796 29981239 -110335526 + MLT1D LTR MaLR 31 493 -12 245 304 14 0 chr10 29981298 29981367 -110335398 + L2 LINE L2 3203 3272 0 1006 151 5 48 chr10 29981706 29981892 -110334873 + AluSg/x SINE Alu 134 311 -1 1740 124 0 93 chr10 29982160 29982482 -110334283 - AluJo SINE Alu -20 292 1 266 333 0 10 chr10 29982662 29982761 -110334004 - MIR3 SINE MIR -3 205 108 1559 208 3 3 chr10 29984413 29984702 -110332063 + AluJo SINE Alu 1 289 -23 385 321 42 9 chr10 29985001 29985334 -110331431 - L1M4c LINE L1 -4022 2362 2019 400 186 12 12 chr10 29985377 29985463 -110331302 - L1MD1 LINE L1 -16 6620 6535 2820 221 16 10 chr10 29985513 29986192 -110330573 - L1MD1 LINE L1 -72 6564 5882 974 180 45 36 chr10 29986218 29986440 -110330325 - MLT1A2 LTR MaLR -133 241 18 1545 199 151 5 chr10 29986458 29986875 -110329890 - MLT1A2-int LTR MaLR 0 1735 1258 2303 153 49 14 chr10 29986944 29987236 -110329529 - L1MC1 LINE L1 -177 6156 5841 1677 211 25 25 chr10 29987236 29987561 -110329204 + MLT1A1 LTR MaLR 1 328 -37 2066 112 44 0 chr10 29987561 29987857 -110328908 - AluSc SINE Alu 0 309 1 1677 211 25 25 chr10 29987857 29987896 -110328869 + MLT1A1 LTR MaLR 327 365 0 2303 153 49 14 chr10 29987896 29988048 -110328717 - L1MC1 LINE L1 -492 5841 5696 790 229 16 28 chr10 29988049 29988302 -110328463 - L1MD1 LINE L1 -2092 4448 4199 1645 244 46 28 chr10 29988348 29989062 -110327703 - L1MD1 LINE L1 -2475 4065 3339 2617 146 6 2 chr10 29989081 29989562 -110327203 + L1 LINE L1 4478 4960 -1186 2910 128 17 50 chr10 29989583 29990100 -110326665 + L1PA16 LINE L1 5660 6159 -7 1443 231 64 32 chr10 29990613 29991413 -110325352 - L1MD1 LINE L1 -3562 2978 2153 3933 223 73 23 chr10 29992052 29993624 -110323141 - L1MD1 LINE L1 -4379 2161 251 252 0 0 0 chr10 29993624 29993652 -110323113 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3933 223 73 23 chr10 29993652 29993917 -110322848 - L1MD1 LINE L1 -6289 251 1 2019 256 79 22 chr10 29993909 29994850 -110321915 - L1M4c LINE L1 -4489 1895 902 * 376 178 0 0 chr10 29994861 29994934 -110321831 - MSTC LTR MaLR -355 73 1 765 325 116 37 chr10 29994934 29996087 -110320678 + L2 LINE L2 1575 3123 -190 323 306 211 33 chr10 29996424 29996760 -110320005 + L2 LINE L2 2221 2616 -698 196 255 39 59 chr10 29996944 29997046 -110319719 + L2 LINE L2 2977 3076 -196 342 0 0 0 chr10 29997852 29997890 -110318875 + (TG)n Simple_repeat Simple_repeat 2 39 0 2529 92 14 0 chr10 29998277 29998635 -110318130 - L1PB1 LINE L1 0 6151 5789 862 330 104 29 chr10 29998682 29999403 -110317362 + L2 LINE L2 1840 2614 -700 311 333 10 0 chr10 29999535 29999637 -110317128 + MER5A DNA MER1_type 1 103 -86 1436 178 37 40 chr10 29999783 30000081 -110316684 - AluJb SINE Alu -15 297 1 320 359 94 6 chr10 30000398 30000568 -110316197 + L2 LINE L2 3087 3271 -1 3673 34 2 0 chr10 30000613 30001051 -110315714 + L1PA4 LINE L1 5716 6154 -1 187 325 0 12 chr10 30001211 30001294 -110315471 - L2 LINE L2 -688 2626 2545 2880 190 23 29 chr10 30001345 30001965 -110314800 - MLT1E3 LTR MaLR 0 624 9 2181 103 3 0 chr10 30002436 30002728 -110314037 + AluSx SINE Alu 1 293 -19 457 292 72 26 chr10 30003943 30004138 -110312627 + MIR SINE MIR 3 206 -56 2517 71 0 0 chr10 30004474 30004782 -110311983 + AluY SINE Alu 1 308 -3 837 271 31 9 chr10 30004923 30005152 -110311613 - MIR SINE MIR -11 251 18 997 98 0 0 chr10 30006292 30006424 -110310341 + FLAM_C SINE Alu 1 132 -1 2118 123 0 7 chr10 30009456 30009758 -110307007 - AluSx SINE Alu -12 300 1 560 179 0 0 chr10 30010873 30010968 -110305797 - AluJb SINE Alu -28 284 190 1597 186 0 4 chr10 30010971 30011240 -110305525 - AluJb SINE Alu -44 268 1 235 233 95 17 chr10 30013041 30013157 -110303608 + L1ME LINE L1 28 152 -5918 274 331 38 6 chr10 30013320 30013480 -110303285 + L1ME LINE L1 320 484 -5586 1825 265 114 26 chr10 30013646 30013774 -110302991 + L1ME LINE L1 526 641 -5439 242 29 29 0 chr10 30013774 30013809 -110302956 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1825 265 114 26 chr10 30013809 30014115 -110302650 + L1ME LINE L1 641 919 -5161 180 0 0 0 chr10 30014115 30014135 -110302630 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1825 265 114 26 chr10 30014135 30015146 -110301619 + L1ME LINE L1 919 2075 -4005 450 0 0 0 chr10 30015151 30015201 -110301564 + (CA)n Simple_repeat Simple_repeat 2 51 0 389 221 81 23 chr10 30015203 30015375 -110301390 + L1 LINE L1 3821 4002 -2144 1308 181 26 20 chr10 30015456 30015798 -110300967 + L1M4 LINE L1 4981 5324 -822 1941 154 7 7 chr10 30015798 30016103 -110300662 + AluSx SINE Alu 1 305 -7 1340 188 60 94 chr10 30016107 30016216 -110300549 + L1 LINE L1 3973 4084 -2062 1927 130 0 68 chr10 30016216 30016539 -110300226 + AluSx SINE Alu 1 301 -11 1340 188 60 94 chr10 30016539 30016718 -110300047 + L1 LINE L1 4084 4268 -1878 333 47 0 0 chr10 30016718 30016761 -110300004 + (CA)n Simple_repeat Simple_repeat 2 44 0 1340 188 60 94 chr10 30016761 30016972 -110299793 + L1 LINE L1 4268 4456 -1690 187 303 15 45 chr10 30017102 30017168 -110299597 - MER5B DNA MER1_type -83 95 32 1467 93 44 4 chr10 30017182 30017407 -110299358 + L1PA8 LINE L1 5938 6171 -1 241 253 157 10 chr10 30017420 30017631 -110299134 - L1MC/D LINE L1 -705 5537 5296 1995 147 3 0 chr10 30017704 30018003 -110298762 - AluSx SINE Alu -12 300 1 228 346 87 51 chr10 30018003 30018373 -110298392 - L2 LINE L2 -521 2793 2411 424 355 101 14 chr10 30018582 30018928 -110297837 - L2 LINE L2 -2315 999 624 264 216 23 23 chr10 30018934 30019022 -110297743 + MER20B DNA MER1_type 2 89 -694 2328 109 0 0 chr10 30019195 30019499 -110297266 - AluSx SINE Alu -8 304 1 750 180 71 42 chr10 30019744 30019983 -110296782 + MER20B DNA MER1_type 515 760 -23 2304 70 11 7 chr10 30021088 30021375 -110295390 - AluY SINE Alu -23 288 1 42 0 0 0 chr10 30021761 30021803 -110294962 + AT_rich Low_complexity Low_complexity 1 42 0 1579 79 34 38 chr10 30021814 30021860 -110294905 - L1MA1 LINE L1 -4 6298 6253 192 40 0 0 chr10 30021860 30021885 -110294880 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2194 106 0 3 chr10 30021885 30022168 -110294597 - AluSc SINE Alu -27 282 1 1579 79 34 38 chr10 30022168 30022386 -110294379 - L1MA1 LINE L1 -47 6255 6034 506 287 102 0 chr10 30022401 30022568 -110294197 - MIR SINE MIR -13 249 66 461 297 18 0 chr10 30022870 30023035 -110293730 + L1ME3A LINE L1 4458 4625 -1521 377 210 25 95 chr10 30023107 30023307 -110293458 + L1ME3A LINE L1 5377 5562 -600 1866 184 70 25 chr10 30023322 30023724 -110293041 + MSTB1 LTR MaLR 1 420 -12 750 276 68 13 chr10 30023794 30024105 -110292660 + L1ME3A LINE L1 5613 5940 -230 2026 156 13 0 chr10 30024106 30024408 -110292357 + AluSx SINE Alu 1 306 -6 327 301 104 38 chr10 30024552 30024898 -110291867 + HAL1b LINE L1 230 598 -750 3632 205 76 71 chr10 30025340 30025489 -110291276 - L1MC/D LINE L1 -912 5234 5087 2394 80 3 0 chr10 30025489 30025791 -110290974 + AluY SINE Alu 1 303 -8 3632 205 76 71 chr10 30025791 30026899 -110289866 - L1MC/D LINE L1 -1059 5087 3987 227 191 0 0 chr10 30026899 30026941 -110289824 - AluSx SINE Alu -6 296 255 1634 134 0 0 chr10 30026941 30027157 -110289608 - AluSx SINE Alu -96 216 1 3632 205 76 71 chr10 30027157 30027297 -110289468 - L1MC/D LINE L1 -2158 3988 3786 302 211 39 39 chr10 30027298 30027402 -110289363 - MER46A DNA MER2_type -2 234 131 186 150 0 0 chr10 30029576 30029616 -110287149 + (TG)n Simple_repeat Simple_repeat 2 41 0 859 118 0 0 chr10 30029852 30029971 -110286794 - AluSq/x SINE Alu -193 119 1 25 0 0 0 chr10 30030604 30030629 -110286136 + AT_rich Low_complexity Low_complexity 1 25 0 1734 174 3 3 chr10 30030732 30031019 -110285746 - AluJo SINE Alu -25 287 1 26 88 0 0 chr10 30031074 30031142 -110285623 + AT_rich Low_complexity Low_complexity 1 68 0 1885 155 7 19 chr10 30031619 30031928 -110284837 + AluSx SINE Alu 1 305 -7 4454 213 92 27 chr10 30032152 30033517 -110283248 + Charlie1a DNA MER1_type 3 1455 0 292 336 95 33 chr10 30034724 30034998 -110281767 - L2 LINE L2 -24 3289 2999 277 200 42 25 chr10 30035130 30035250 -110281515 + (TTATA)n Simple_repeat Simple_repeat 1 122 0 668 132 0 0 chr10 30035267 30035358 -110281407 + AluS SINE Alu 1 91 -221 31 68 0 0 chr10 30035358 30035417 -110281348 + AT_rich Low_complexity Low_complexity 1 59 0 224 130 22 0 chr10 30035423 30035469 -110281296 + (TATAA)n Simple_repeat Simple_repeat 5 51 0 2241 118 3 0 chr10 30036286 30036591 -110280174 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr10 30036645 30036677 -110280088 + AT_rich Low_complexity Low_complexity 1 32 0 1933 157 0 25 chr10 30037902 30038221 -110278544 + AluJb SINE Alu 1 311 -1 4332 235 43 19 chr10 30038221 30040065 -110276700 + L1MCa LINE L1 2180 4069 -2357 2900 170 34 80 chr10 30040165 30040937 -110275828 + L1MB8 LINE L1 5437 6172 -6 382 211 11 0 chr10 30041009 30041104 -110275661 + MER53 DNA DNA 94 189 0 2136 118 3 0 chr10 30041169 30041466 -110275299 + AluSx SINE Alu 1 298 -14 252 338 35 98 chr10 30041836 30042151 -110274614 + L2 LINE L2 2697 2956 -316 2383 107 0 0 chr10 30042151 30042451 -110274314 - AluSx SINE Alu -12 300 1 252 338 35 98 chr10 30042451 30042732 -110274033 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 30042765 30042891 -110273874 + L1MA3 LINE L1 6178 6305 0 2081 131 10 10 chr10 30043263 30043576 -110273189 + AluSq SINE Alu 1 313 0 1754 154 33 27 chr10 30043922 30044252 -110272513 - THE1B LTR MaLR -32 332 1 379 310 108 6 chr10 30044620 30044778 -110271987 + MIR SINE MIR 14 187 -75 35 0 0 0 chr10 30045667 30045702 -110271063 + AT_rich Low_complexity Low_complexity 1 35 0 1213 73 0 0 chr10 30047364 30047514 -110269251 - AluSc SINE Alu -4 305 156 384 256 107 48 chr10 30048234 30048523 -110268242 - L1M4 LINE L1 -813 5333 5028 253 231 13 26 chr10 30048530 30048608 -110268157 - MER116 DNA Mariner -3 77 1 351 217 74 69 chr10 30048614 30048789 -110267976 - HAL1 LINE L1 -32 2475 2300 963 260 110 31 chr10 30048794 30049148 -110267617 - L2 LINE L2 -16 3297 2916 182 143 0 29 chr10 30049310 30049345 -110267420 - L2 LINE L2 -364 2949 2916 1553 250 150 31 chr10 30049411 30049990 -110266775 - L2 LINE L2 -363 2951 2304 884 166 33 13 chr10 30050237 30050388 -110266377 + FRAM SINE Alu 2 155 -11 2377 95 3 0 chr10 30051113 30051419 -110265346 + AluSp SINE Alu 1 307 -6 2402 92 3 0 chr10 30051774 30052079 -110264686 - AluSx SINE Alu -6 306 1 1537 212 13 13 chr10 30052266 30052573 -110264192 - AluJo SINE Alu -1 311 5 530 168 25 17 chr10 30052575 30052694 -110264071 - MLT1D LTR MaLR -385 120 1 1107 134 36 62 chr10 30052851 30053037 -110263728 - L1PB4 LINE L1 -2 6154 5973 1142 99 204 0 chr10 30053037 30053228 -110263537 + MER30 DNA MER1_type 1 230 0 1107 134 36 62 chr10 30053228 30053265 -110263500 - L1PB4 LINE L1 -183 5973 5937 251 309 96 51 chr10 30053533 30053866 -110262899 + L2 LINE L2 2088 2435 -879 1840 78 142 15 chr10 30053887 30054155 -110262610 - AluSx SINE Alu -10 302 1 661 306 177 8 chr10 30054232 30054683 -110262082 - L2 LINE L2 0 3313 2787 932 193 29 19 chr10 30054730 30054937 -110261828 + MLT1D LTR MaLR 37 245 -260 249 83 0 0 chr10 30054937 30054973 -110261792 + (GA)n Simple_repeat Simple_repeat 1 36 0 433 282 7 35 chr10 30055000 30055190 -110261575 - MLT1E LTR MaLR -379 188 1 1778 145 48 7 chr10 30055934 30056223 -110260542 - AluSx SINE Alu -11 301 1 533 123 9 26 chr10 30056536 30056650 -110260115 + (TCC)n Simple_repeat Simple_repeat 3 114 0 1121 240 47 8 chr10 30056656 30056792 -110259973 - AluJo SINE Alu -44 268 139 183 80 0 0 chr10 30056792 30056817 -110259948 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1121 240 47 8 chr10 30056817 30056938 -110259827 - AluJo SINE Alu -173 139 1 700 200 32 0 chr10 30056940 30057065 -110259700 - FLAM_A SINE Alu -4 129 1 526 313 42 17 chr10 30057077 30057317 -110259448 - MIR SINE MIR -15 247 2 2432 96 0 0 chr10 30057693 30058006 -110258759 - AluSq SINE Alu 0 313 1 554 207 179 0 chr10 30058596 30058736 -110258029 + MER5A DNA MER1_type 25 189 0 656 254 53 16 chr10 30059342 30059531 -110257234 + MIR SINE MIR 19 214 -48 278 221 29 48 chr10 30059658 30059762 -110257003 + L1ME1 LINE L1 926 1027 -5092 38 51 0 0 chr10 30059775 30059834 -110256931 + AT_rich Low_complexity Low_complexity 1 59 0 871 172 0 14 chr10 30059945 30060090 -110256675 + FLAM_C SINE Alu 1 143 0 242 274 20 29 chr10 30060092 30060194 -110256571 + L1ME1 LINE L1 1155 1255 -4864 247 200 18 0 chr10 30060194 30060249 -110256516 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 706 305 92 23 chr10 30060345 30060867 -110255898 + L1ME1 LINE L1 3985 4542 -1587 1058 199 13 101 chr10 30060886 30061203 -110255562 - AluJo SINE Alu -12 290 2 278 284 168 39 chr10 30062235 30062520 -110254245 + MLT1H LTR MaLR 124 445 -104 263 325 42 8 chr10 30062817 30062937 -110253828 + MIR SINE MIR 50 173 -89 1867 150 0 7 chr10 30063070 30063406 -110253359 + AluJb SINE Alu 1 334 0 2115 114 0 0 chr10 30063703 30064008 -110252757 + AluSx SINE Alu 1 305 0 29 70 0 0 chr10 30064150 30064207 -110252558 + AT_rich Low_complexity Low_complexity 1 57 0 252 0 0 0 chr10 30064546 30064574 -110252191 + (A)n Simple_repeat Simple_repeat 1 28 0 2202 157 24 19 chr10 30064753 30065173 -110251592 + MSTB2 LTR MaLR 34 455 -2 533 291 80 22 chr10 30065207 30065571 -110251194 + L1ME1 LINE L1 4865 5249 -880 1279 284 67 26 chr10 30065571 30066067 -110250698 - MLT1E2 LTR MaLR 0 626 111 1938 254 51 59 chr10 30066085 30066124 -110250641 + L1ME1 LINE L1 5245 5283 -866 2159 79 10 3 chr10 30066124 30066415 -110250350 - AluY SINE Alu -18 293 1 1938 254 51 59 chr10 30066415 30067277 -110249488 + L1ME1 LINE L1 5283 6139 -10 2347 57 3 20 chr10 30067277 30067573 -110249192 + AluY SINE Alu 13 303 -8 510 289 68 44 chr10 30067612 30067906 -110248859 - L1MEc LINE L1 -4358 2038 1738 23 33 0 0 chr10 30068169 30068199 -110248566 + AT_rich Low_complexity Low_complexity 1 30 0 2354 103 0 0 chr10 30068999 30069299 -110247466 - AluSq SINE Alu -13 300 1 1590 140 76 73 chr10 30069384 30069726 -110247039 - MER2 DNA MER2_type -1 343 1 1722 168 0 26 chr10 30070289 30070592 -110246173 - AluJb SINE Alu -17 295 1 2327 111 0 6 chr10 30071144 30071459 -110245306 - AluSq SINE Alu 0 313 1 212 245 41 20 chr10 30071791 30071840 -110244925 - L3 LINE CR1 -11 1566 1517 436 259 75 14 chr10 30072103 30072250 -110244515 + MIR SINE MIR 102 257 -5 1101 163 0 11 chr10 30072505 30072683 -110244082 + AluSg/x SINE Alu 121 296 -14 350 224 0 9 chr10 30072864 30072971 -110243794 + (TA)n Simple_repeat Simple_repeat 2 107 0 2624 110 36 0 chr10 30073234 30073651 -110243114 - LTR3b LTR ERVK -68 432 1 225 108 0 0 chr10 30073708 30073745 -110243020 + (CA)n Simple_repeat Simple_repeat 2 38 0 389 272 41 14 chr10 30073780 30073927 -110242838 + MIR SINE MIR 110 260 -2 21 0 0 0 chr10 30074012 30074033 -110242732 + AT_rich Low_complexity Low_complexity 1 21 0 2076 130 3 3 chr10 30074424 30074725 -110242040 + AluSx SINE Alu 1 301 -11 1322 151 72 34 chr10 30075649 30075940 -110240825 - THE1C LTR MaLR -73 302 1 2271 65 14 0 chr10 30076599 30076915 -110239850 - AluY SINE Alu 0 320 1 530 364 65 32 chr10 30077183 30077647 -110239118 + L2 LINE L2 340 818 -2496 596 211 65 16 chr10 30077668 30077791 -110238974 + FLAM_C SINE Alu 3 131 -12 330 365 34 24 chr10 30077852 30078060 -110238705 + L2 LINE L2 912 1121 -2193 23 0 0 0 chr10 30079585 30079608 -110237157 + AT_rich Low_complexity Low_complexity 1 23 0 1430 36 0 0 chr10 30079646 30079812 -110236953 + AluY SINE Alu 146 311 0 28 29 0 0 chr10 30080344 30080379 -110236386 + AT_rich Low_complexity Low_complexity 1 35 0 1679 84 0 5 chr10 30080988 30081202 -110235563 + AluSg SINE Alu 1 213 -97 3548 134 44 25 chr10 30082799 30082983 -110233782 + Tigger3b DNA MER2_type 21 200 -2828 1737 121 3 25 chr10 30082983 30083086 -110233679 + AluSg SINE Alu 32 136 -174 2386 31 41 10 chr10 30083086 30083378 -110233387 + AluY SINE Alu 1 301 -10 1737 121 3 25 chr10 30083378 30083556 -110233209 + AluSg SINE Alu 136 307 -3 3548 134 44 25 chr10 30083556 30084048 -110232717 + Tigger3b DNA MER2_type 200 710 -521 1940 155 0 3 chr10 30084984 30085280 -110231485 + AluJo SINE Alu 1 295 -17 226 0 29 29 chr10 30085927 30085962 -110230803 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2160 103 7 7 chr10 30085965 30086257 -110230508 - AluSq SINE Alu -21 292 1 21 0 0 0 chr10 30087010 30087031 -110229734 + AT_rich Low_complexity Low_complexity 1 21 0 1054 284 100 14 chr10 30087871 30088832 -110227933 + L1ME3A LINE L1 5106 6165 -5 206 321 110 28 chr10 30088838 30089056 -110227709 - L2 LINE L2 -81 3232 2997 * 533 288 119 43 chr10 30089041 30089319 -110227446 - L2 LINE L2 -447 2867 2569 561 200 0 9 chr10 30089339 30089449 -110227316 - MER58A DNA MER1_type 0 152 44 2190 114 0 3 chr10 30089496 30089793 -110226972 + AluSg1 SINE Alu 6 301 -8 842 205 6 0 chr10 30089793 30089949 -110226816 + AluJo/FRAM SINE Alu 135 291 -21 27 73 0 0 chr10 30090623 30090678 -110226087 + AT_rich Low_complexity Low_complexity 1 55 0 32 0 0 0 chr10 30092211 30092243 -110224522 + AT_rich Low_complexity Low_complexity 1 32 0 2464 76 0 25 chr10 30093054 30093371 -110223394 + AluY SINE Alu 1 309 -2 23 33 0 0 chr10 30093430 30093460 -110223305 + AT_rich Low_complexity Low_complexity 1 30 0 516 265 27 7 chr10 30093916 30094063 -110222702 + MIR SINE MIR 63 212 -50 2275 115 3 13 chr10 30094066 30094378 -110222387 + AluSx SINE Alu 1 309 -3 406 371 105 3 chr10 30094681 30094994 -110221771 + L1MB8 LINE L1 4821 5165 -981 2334 246 68 26 chr10 30145022 30145602 -110171163 - L1MEc LINE L1 -3655 2560 2005 1960 139 0 25 chr10 30145602 30145918 -110170847 - AluJb SINE Alu -4 308 1 2334 246 68 26 chr10 30145918 30146524 -110170241 - L1MEc LINE L1 -4210 2005 1428 8733 214 57 32 chr10 30147251 30147366 -110169399 + L1MC2 LINE L1 2065 2176 -4448 1449 199 0 25 chr10 30147366 30147683 -110169082 + AluJb SINE Alu 1 309 -3 8733 214 57 32 chr10 30147683 30149524 -110167241 + L1MC2 LINE L1 2176 3970 -2654 1058 153 8 111 chr10 30149524 30149785 -110166980 + MER46A DNA MER2_type 1 234 -2 8733 214 57 32 chr10 30149785 30149926 -110166839 + L1MC2 LINE L1 3970 4106 -2518 1590 134 0 0 chr10 30149926 30150142 -110166623 + AluSx SINE Alu 1 216 -96 260 167 0 0 chr10 30150142 30150184 -110166581 + AluSx SINE Alu 255 296 -6 8733 214 57 32 chr10 30150184 30151293 -110165472 + L1MC2 LINE L1 4106 5186 -1438 2354 83 3 0 chr10 30151293 30151595 -110165170 - AluY SINE Alu -8 303 1 8733 214 57 32 chr10 30151595 30152081 -110164684 + L1MC2 LINE L1 5186 5659 -965 2236 112 0 16 chr10 30152081 30152395 -110164370 - AluSg SINE Alu -1 309 1 8733 214 57 32 chr10 30152395 30153128 -110163637 + L1MC2 LINE L1 5659 6615 -9 4031 168 19 72 chr10 30153130 30154048 -110162717 + L1MB8 LINE L1 5304 6172 -6 411 211 11 0 chr10 30154120 30154215 -110162550 + MER53 DNA DNA 94 189 0 2131 117 3 0 chr10 30154280 30154578 -110162187 + AluSx SINE Alu 1 299 -13 226 338 35 98 chr10 30154948 30155263 -110161502 + L2 LINE L2 2697 2956 -316 2321 113 0 0 chr10 30155263 30155564 -110161201 - AluSx SINE Alu -11 301 1 226 338 35 98 chr10 30155564 30155845 -110160920 + L2 LINE L2 2956 3253 -19 791 119 16 0 chr10 30155878 30156004 -110160761 + L1MA3 LINE L1 6178 6305 0 2031 132 10 10 chr10 30156376 30156687 -110160078 + AluSq SINE Alu 1 311 -2 1813 146 76 29 chr10 30157019 30157366 -110159399 - THE1B LTR MaLR 0 428 1 1162 200 157 16 chr10 30157699 30157954 -110158811 - AluJb SINE Alu -11 291 1 234 0 0 0 chr10 30157961 30157987 -110158778 + (CA)n Simple_repeat Simple_repeat 2 27 0 228 274 55 14 chr10 30158814 30158887 -110157878 - MIR SINE MIR -71 191 116 180 0 0 0 chr10 30161578 30161598 -110155167 + (A)n Simple_repeat Simple_repeat 1 20 0 321 214 119 12 chr10 30161944 30162028 -110154737 + MIR SINE MIR 157 249 -13 802 180 102 90 chr10 30162211 30162242 -110154523 + L1MD2 LINE L1 6101 6130 -229 2249 123 0 0 chr10 30162242 30162543 -110154222 + AluSx SINE Alu 1 301 -11 802 180 102 90 chr10 30162543 30162767 -110153998 + L1MD2 LINE L1 6130 6359 0 194 324 0 14 chr10 30162781 30162855 -110153910 + MIR SINE MIR 170 242 -20 28 29 0 0 chr10 30163045 30163080 -110153685 + AT_rich Low_complexity Low_complexity 1 35 0 253 331 81 69 chr10 30163615 30163875 -110152890 - L2 LINE L2 0 3272 3010 1841 166 134 6 chr10 30163875 30164225 -110152540 + MSTD LTR MaLR 1 395 -1 235 376 68 8 chr10 30164250 30164367 -110152398 - L2 LINE L2 -12 3260 3137 24 67 0 0 chr10 30164689 30164734 -110152031 + AT_rich Low_complexity Low_complexity 1 45 0 1703 157 42 26 chr10 30165496 30165802 -110150963 + AluJo SINE Alu 1 311 -1 522 224 66 28 chr10 30166018 30166232 -110150533 - LTR41 LTR ERVL 0 795 556 959 182 19 25 chr10 30166664 30166875 -110149890 - LTR41 LTR ERVL -558 237 1 2058 153 97 8 chr10 30166913 30167306 -110149459 + MSTA LTR MaLR 1 428 0 382 198 12 0 chr10 30167306 30167392 -110149373 + AluJo SINE Alu 43 129 -173 1047 164 0 12 chr10 30167402 30167567 -110149198 + AluJo SINE Alu 137 299 -3 2578 164 7 55 chr10 30167847 30168345 -110148420 + MLT2B2 LTR ERVL 1 379 -35 416 116 101 0 chr10 30168353 30168422 -110148343 + MADE1 DNA Mariner 5 80 0 230 91 23 23 chr10 30168464 30168508 -110148257 + MLT2B2 LTR ERVL 466 504 -11 1012 170 0 0 chr10 30169184 30169343 -110147422 - FRAM SINE Alu -6 160 2 609 260 65 25 chr10 30169849 30170049 -110146716 - L2 LINE L2 -418 2896 2689 968 158 18 6 chr10 30170049 30170213 -110146552 + AluJ SINE Alu 136 301 -11 1693 290 174 12 chr10 30170221 30171021 -110145744 - L2 LINE L2 -612 2702 1774 1345 199 8 8 chr10 30171029 30171285 -110145480 - AluJo SINE Alu -20 292 37 581 247 145 49 chr10 30171288 30171592 -110145173 - L2 LINE L2 -1659 1655 1323 2139 111 14 10 chr10 30171594 30171891 -110144874 + AluSg SINE Alu 1 298 -12 189 0 0 0 chr10 30171891 30171912 -110144853 + (GA)n Simple_repeat Simple_repeat 2 22 0 3241 155 20 79 chr10 30172676 30173410 -110143355 + LTR8 LTR ERV1 1 691 0 271 293 105 23 chr10 30173582 30173715 -110143050 - L2 LINE L2 -259 3054 2911 502 292 146 0 chr10 30173728 30173906 -110142859 + MIR SINE MIR 24 227 -35 715 164 0 45 chr10 30174171 30174305 -110142460 + AluJo SINE Alu 1 128 -174 595 143 10 0 chr10 30174305 30174403 -110142362 + AluJo SINE Alu 190 288 -24 2140 130 7 0 chr10 30175330 30175638 -110141127 + AluSx SINE Alu 3 312 0 21 0 0 0 chr10 30176858 30176879 -110139886 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 30177866 30177894 -110138871 + AT_rich Low_complexity Low_complexity 1 28 0 1721 143 50 17 chr10 30180296 30180596 -110136169 + AluJb SINE Alu 1 310 -2 2349 68 10 0 chr10 30180654 30180946 -110135819 + AluY SINE Alu 1 295 -16 1606 82 0 5 chr10 30181017 30181225 -110135540 + AluSg/x SINE Alu 87 293 -19 2150 107 38 0 chr10 30181994 30182285 -110134480 + AluSx SINE Alu 1 302 -10 37 23 0 0 chr10 30182939 30182983 -110133782 + AT_rich Low_complexity Low_complexity 1 44 0 1949 209 32 4 chr10 30183170 30183900 -110132865 + L1MB4 LINE L1 4907 5649 -531 2409 188 4 31 chr10 30183965 30184338 -110132427 + L1MB4 LINE L1 5643 5998 -182 2097 108 24 0 chr10 30184338 30184626 -110132139 - AluSx SINE Alu -17 295 1 2409 188 4 31 chr10 30184626 30184805 -110131960 + L1MB4 LINE L1 5998 6180 0 5300 90 0 6 chr10 30185388 30186100 -110130665 - L1PA10 LINE L1 -5 6163 5456 2341 98 16 0 chr10 30186564 30186871 -110129894 + AluSx SINE Alu 1 312 0 435 291 79 58 chr10 30186890 30187688 -110129077 + L1MC/D LINE L1 921 1818 -4492 2610 55 0 0 chr10 30187688 30187996 -110128769 + AluY SINE Alu 1 308 -3 435 291 79 58 chr10 30187996 30188508 -110128257 + L1MC/D LINE L1 1818 2318 -3992 2084 102 3 11 chr10 30188612 30188924 -110127841 + AluSx SINE Alu 1 310 0 1707 292 127 19 chr10 30188924 30190147 -110126618 + L1MC/D LINE L1 2475 3829 -2300 1682 151 32 21 chr10 30190153 30190432 -110126333 + AluJo SINE Alu 1 282 -30 297 0 0 0 chr10 30190437 30190470 -110126295 + (CA)n Simple_repeat Simple_repeat 2 34 0 639 232 141 9 chr10 30190492 30190712 -110126053 + MER69 DNA AcHobo 2178 2426 -100 1605 151 94 39 chr10 30191173 30191504 -110125261 + L1MC3 LINE L1 6343 6691 -1094 2397 63 0 35 chr10 30191504 30191822 -110124943 + AluY SINE Alu 1 307 -4 830 157 8 0 chr10 30191833 30191967 -110124798 + AluJo SINE Alu 1 135 -177 227 232 9 36 chr10 30191967 30192079 -110124686 + A-rich Low_complexity Low_complexity 1 109 0 4952 180 38 31 chr10 30192092 30192866 -110123899 + L1MC3 LINE L1 6675 7460 -325 1747 156 11 4 chr10 30192866 30193184 -110123581 - AluJb SINE Alu 0 323 4 4952 180 38 31 chr10 30193184 30193491 -110123274 + L1MC3 LINE L1 7460 7764 -21 428 295 100 39 chr10 30193601 30194264 -110122501 + L1MC/D LINE L1 4871 5565 -751 2133 118 0 6 chr10 30197211 30197525 -110119240 - AluSx SINE Alu 0 312 1 516 327 161 0 chr10 30197806 30198029 -110118736 + MIR SINE MIR 2 260 -2 182 203 0 17 chr10 30198993 30199052 -110117713 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4225 184 93 93 chr10 30200632 30202086 -110114679 + Charlie1a DNA MER1_type 1 1454 -1 477 205 40 3 chr10 30202096 30202246 -110114519 - MER58B DNA MER1_type 0 341 30 297 333 29 9 chr10 30203551 30203656 -110113109 + MIR SINE MIR 1 107 -155 633 90 0 0 chr10 30203740 30203818 -110112947 - AluSp/q SINE Alu -19 294 217 2983 233 76 9 chr10 30203818 30204677 -110112088 + L1M4c LINE L1 974 1889 -4495 1039 188 38 61 chr10 30204687 30204948 -110111817 - THE1B LTR MaLR -109 255 1 488 248 198 13 chr10 30204974 30205131 -110111634 + MLT1I LTR MaLR 224 409 0 1812 181 49 0 chr10 30206712 30207038 -110109727 + MER7A DNA MER2_type 6 345 -1 414 198 28 38 chr10 30207052 30207158 -110109607 + L2 LINE L2 3209 3313 0 35 0 0 0 chr10 30207206 30207241 -110109524 + AT_rich Low_complexity Low_complexity 1 35 0 2055 109 14 0 chr10 30207385 30207660 -110109105 + AluSx SINE Alu 1 279 -33 428 309 69 5 chr10 30208258 30208462 -110108303 + L1MC4 LINE L1 7814 8030 -12 2058 122 11 0 chr10 30209261 30209573 -110107192 + AluSx SINE Alu 1 315 0 229 243 43 0 chr10 30209583 30209653 -110107112 + L1ME LINE L1 5606 5678 -443 746 175 0 17 chr10 30209854 30209974 -110106791 + FLAM_A SINE Alu 1 118 -15 2047 120 0 27 chr10 30210983 30211284 -110105481 - AluSg SINE Alu -17 293 1 2199 128 0 0 chr10 30211792 30212104 -110104661 + AluSx SINE Alu 1 312 0 1976 95 19 4 chr10 30213225 30213488 -110103277 - AluSx SINE Alu -45 267 1 2050 120 34 0 chr10 30213492 30213783 -110102982 - AluSg SINE Alu -9 301 1 238 295 36 22 chr10 30214497 30214636 -110102129 + L1MC/D LINE L1 5626 5766 -2042 197 325 231 26 chr10 30214898 30215015 -110101750 + L2 LINE L2 3132 3272 0 3141 17 0 6 chr10 30215490 30215837 -110100928 + L1PA2 LINE L1 5811 6155 0 216 0 0 0 chr10 30216461 30216485 -110100280 + (TA)n Simple_repeat Simple_repeat 1 24 0 2201 120 0 0 chr10 30216487 30216778 -110099987 - AluSx SINE Alu -21 291 1 28 0 0 0 chr10 30216778 30216806 -110099959 + AT_rich Low_complexity Low_complexity 1 28 0 214 348 241 0 chr10 30216847 30216959 -110099806 - L2 LINE L2 -8 3264 3126 1850 144 7 26 chr10 30217375 30217680 -110099085 + AluSx SINE Alu 1 299 -13 1760 158 0 14 chr10 30217775 30218059 -110098706 + AluJb SINE Alu 1 280 -32 2171 125 13 0 chr10 30218570 30218873 -110097892 + AluSx SINE Alu 1 307 -5 817 142 0 9 chr10 30219843 30219956 -110096809 + AluJo/FLAM SINE Alu 2 113 -199 2242 88 3 3 chr10 30219958 30220264 -110096501 + AluSx SINE Alu 13 318 0 825 40 0 0 chr10 30220264 30220365 -110096400 + (TA)n Simple_repeat Simple_repeat 2 102 0 813 87 0 0 chr10 30220378 30220482 -110096283 - AluSc SINE Alu -205 104 1 2207 120 0 0 chr10 30220860 30221169 -110095596 + AluSx SINE Alu 1 309 -3 1692 156 29 7 chr10 30222101 30222377 -110094388 + AluJo SINE Alu 1 282 -30 29 0 0 0 chr10 30222660 30222689 -110094076 + AT_rich Low_complexity Low_complexity 1 29 0 256 191 59 29 chr10 30222955 30223023 -110093742 - L2 LINE L2 -1288 2026 1957 1809 174 0 0 chr10 30223364 30223645 -110093120 + AluJb SINE Alu 2 282 -30 1979 98 36 7 chr10 30224047 30224346 -110092419 - AluSx SINE Alu 0 307 1 212 282 155 0 chr10 30224366 30224437 -110092328 - MIR SINE MIR -150 112 31 851 120 0 8 chr10 30224556 30224681 -110092084 + FRAM SINE Alu 47 170 -6 228 311 98 23 chr10 30224863 30224995 -110091770 + L2 LINE L2 3161 3302 -11 933 249 61 9 chr10 30225145 30225358 -110091407 + MER58A DNA MER1_type 1 224 0 487 270 66 135 chr10 30225372 30225555 -110091210 - L2 LINE L2 0 3313 3119 1373 110 75 35 chr10 30225555 30225782 -110090983 + MER46A DNA MER2_type 1 236 0 487 270 66 135 chr10 30225782 30225841 -110090924 - L2 LINE L2 -194 3119 3058 1599 186 3 10 chr10 30225841 30226131 -110090634 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30226134 30226157 -110090608 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 487 270 66 135 chr10 30226157 30226500 -110090265 - L2 LINE L2 -257 3056 2769 2184 117 0 10 chr10 30226537 30226837 -110089928 + AluSx SINE Alu 1 297 -15 1323 93 0 0 chr10 30226858 30227030 -110089735 + AluY SINE Alu 134 305 -6 1755 138 4 14 chr10 30227601 30227877 -110088888 - AluJo SINE Alu -1 311 39 204 192 0 58 chr10 30228475 30228493 -110088272 + G-rich Low_complexity Low_complexity 6 23 -31 779 181 8 0 chr10 30228493 30228620 -110088145 + FLAM_A SINE Alu 1 128 -5 204 192 0 58 chr10 30228620 30228653 -110088112 + G-rich Low_complexity Low_complexity 23 54 0 2242 103 0 7 chr10 30229781 30230081 -110086684 + AluSc SINE Alu 1 298 -11 441 187 44 0 chr10 30230389 30230480 -110086285 + L1ME3A LINE L1 6064 6158 -12 2300 106 3 3 chr10 30230993 30231305 -110085460 - AluSx SINE Alu 0 312 1 848 264 24 0 chr10 30231938 30232150 -110084615 + AluJo SINE Alu 4 220 -92 2547 59 10 0 chr10 30232181 30232486 -110084279 - AluY SINE Alu -3 308 1 21 36 0 0 chr10 30232486 30232514 -110084251 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 30233202 30233494 -110083271 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 30233494 30233794 -110082971 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 30233794 30233903 -110082862 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 30234118 30234418 -110082347 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 30234947 30234998 -110081767 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 30234998 30235274 -110081491 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 30235276 30235296 -110081469 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 30235296 30235359 -110081406 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 30235359 30235611 -110081154 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 30236134 30236162 -110080603 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 30237534 30237810 -110078955 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 30238311 30238635 -110078130 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 30239156 30239476 -110077289 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 30239712 30239960 -110076805 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 30241359 30241550 -110075215 + MIR SINE MIR 47 250 -12 2278 102 0 0 chr10 30241607 30241902 -110074863 - AluSx SINE Alu -17 295 1 1107 193 72 77 chr10 30243194 30243277 -110073488 + L1MC5 LINE L1 6984 7066 -895 2251 102 3 3 chr10 30243277 30243572 -110073193 - AluSp SINE Alu -18 295 1 1107 193 72 77 chr10 30243572 30243892 -110072873 + L1MC5 LINE L1 7066 7385 -576 21 0 0 0 chr10 30243933 30243954 -110072811 + AT_rich Low_complexity Low_complexity 1 21 0 2360 96 0 6 chr10 30244151 30244463 -110072302 + AluY SINE Alu 2 311 0 2672 221 38 32 chr10 30244659 30245351 -110071414 + Charlie1a DNA MER1_type 1 696 -759 783 113 20 67 chr10 30245359 30245509 -110071256 + L1MA10 LINE L1 6090 6232 -102 535 183 250 12 chr10 30245519 30245683 -110071082 - Charlie1 DNA MER1_type -497 2264 2062 587 133 0 0 chr10 30245689 30245779 -110070986 + L1MA10 LINE L1 6235 6324 -10 3075 170 92 27 chr10 30245788 30246331 -110070434 + Charlie1 DNA MER1_type 2007 2608 -153 2018 148 0 3 chr10 30246331 30246628 -110070137 - AluJb SINE Alu -16 296 1 3075 170 92 27 chr10 30246628 30246791 -110069974 + Charlie1 DNA MER1_type 2608 2759 -2 2306 101 0 3 chr10 30247105 30247402 -110069363 + AluSx SINE Alu 1 296 -16 319 278 189 39 chr10 30247694 30247874 -110068891 - L2 LINE L2 -516 2798 2592 1909 173 0 0 chr10 30247905 30248206 -110068559 - AluSx SINE Alu -11 301 1 281 247 86 74 chr10 30248382 30248544 -110068221 - L1MC5 LINE L1 -30 7931 7768 2170 123 0 3 chr10 30248559 30248860 -110067905 - AluSq SINE Alu -13 300 1 1928 117 3 27 chr10 30249411 30249711 -110067054 + AluSx SINE Alu 1 293 -19 3845 124 116 9 chr10 30249718 30250402 -110066363 + Tigger3(Golem) DNA MER2_type 2272 3028 -1 475 263 53 29 chr10 30250591 30250762 -110066003 - MER5B DNA MER1_type -1 177 3 230 258 19 126 chr10 30251378 30251537 -110065228 + L1ME LINE L1 5378 5519 -645 367 301 123 21 chr10 30251793 30252029 -110064736 - L2 LINE L2 -5 3308 3049 1876 80 52 52 chr10 30252113 30252402 -110064363 + AluY SINE Alu 1 289 -22 593 230 182 10 chr10 30252838 30253047 -110063718 - MIR SINE MIR -10 252 8 673 261 11 27 chr10 30253057 30253241 -110063524 + MER5A DNA MER1_type 9 189 0 14842 125 41 6 chr10 30255167 30255504 -110061261 - Tigger1 DNA MER2_type -1 2417 2093 2197 114 3 3 chr10 30255504 30255802 -110060963 + AluSx SINE Alu 1 298 -14 14842 125 41 6 chr10 30255802 30257766 -110058999 - Tigger1 DNA MER2_type -325 2093 34 2512 57 0 7 chr10 30257854 30258154 -110058611 - AluY SINE Alu -13 298 1 2022 105 41 27 chr10 30258757 30259052 -110057713 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr10 30260658 30260681 -110056084 + GC_rich Low_complexity Low_complexity 1 23 0 27 49 0 0 chr10 30260722 30260763 -110056002 + GC_rich Low_complexity Low_complexity 1 41 0 194 310 0 0 chr10 30262965 30263023 -110053742 - L2 LINE L2 -32 3240 3183 231 310 140 6 chr10 30263237 30263408 -110053357 - L2 LINE L2 -350 2964 2771 1593 196 11 0 chr10 30264465 30264740 -110052025 + AluJo SINE Alu 10 287 -25 401 89 59 15 chr10 30264740 30264875 -110051890 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 1270 139 0 0 chr10 30266725 30266905 -110049860 + FRAM SINE Alu 1 175 -1 1102 194 144 92 chr10 30267036 30267289 -110049476 + LTR65 LTR ERV1 182 420 -249 1878 97 0 0 chr10 30267289 30267527 -110049238 + AluSx SINE Alu 60 297 -15 1102 194 144 92 chr10 30267527 30267731 -110049034 + LTR65 LTR ERV1 420 663 -6 2039 169 61 17 chr10 30267746 30268089 -110048676 + MSTB LTR MaLR 1 366 -60 2409 96 0 0 chr10 30268089 30268391 -110048374 - AluSx SINE Alu -10 302 1 2039 169 61 17 chr10 30268391 30268455 -110048310 + MSTB LTR MaLR 366 426 0 532 90 0 13 chr10 30268947 30269025 -110047740 - MADE1 DNA Mariner -3 77 1 243 320 100 0 chr10 30269076 30269176 -110047589 + L2 LINE L2 3154 3263 -9 846 170 7 0 chr10 30269690 30269825 -110046940 + AluJo SINE Alu 1 136 -176 273 29 0 0 chr10 30269849 30269883 -110046882 + (CA)n Simple_repeat Simple_repeat 2 35 0 413 161 138 11 chr10 30270069 30270156 -110046609 - LTR12 LTR ERV1 0 714 617 291 218 69 0 chr10 30270156 30270243 -110046522 - LTR30 LTR ERV1 -70 652 560 338 193 72 12 chr10 30270244 30270327 -110046438 - LTR12 LTR ERV1 -422 292 205 1269 126 42 59 chr10 30270366 30270604 -110046161 - LTR12 LTR ERV1 -480 234 1 2208 127 0 9 chr10 30271315 30271630 -110045135 + AluSx SINE Alu 1 312 0 1789 154 3 40 chr10 30271790 30272089 -110044676 - AluJb SINE Alu -23 289 2 462 186 24 89 chr10 30272249 30272373 -110044392 - L2 LINE L2 -2 3270 3155 299 175 35 0 chr10 30272851 30272908 -110043857 + MER102a DNA MER1_type 53 111 -219 1697 190 13 10 chr10 30272950 30273261 -110043504 + AluJo SINE Alu 1 312 0 848 141 5 32 chr10 30273275 30273460 -110043305 + GA-rich Low_complexity Low_complexity 1 180 0 302 265 43 43 chr10 30273481 30273643 -110043122 + MER102a DNA MER1_type 169 330 0 328 98 39 0 chr10 30273731 30273782 -110042983 + L1MC3 LINE L1 7045 7097 -688 277 259 24 0 chr10 30273783 30273868 -110042897 + MLT1F1 LTR MaLR 36 122 -445 2691 161 89 47 chr10 30273870 30274239 -110042526 + L1MC3 LINE L1 7187 7590 -195 2289 113 7 0 chr10 30274239 30274548 -110042217 + AluSx SINE Alu 1 311 -1 2691 161 89 47 chr10 30274548 30274750 -110042015 + L1MC3 LINE L1 7590 7782 -3 1741 177 0 23 chr10 30275321 30275626 -110041139 + AluJo SINE Alu 1 298 -14 305 243 14 0 chr10 30275882 30275952 -110040813 - MER91B DNA MER1_type -26 164 94 490 180 72 18 chr10 30275973 30276084 -110040681 - MER91B DNA MER1_type -60 130 14 362 286 21 7 chr10 30276282 30276422 -110040343 + MIR SINE MIR 121 262 0 2039 148 3 3 chr10 30276479 30276782 -110039983 + AluSx SINE Alu 1 303 -9 2378 108 129 5 chr10 30277061 30277442 -110039323 - MSTA LTR MaLR 0 428 1 1074 123 0 7 chr10 30277475 30277621 -110039144 + AluJo SINE Alu 6 150 -162 1629 156 76 4 chr10 30277769 30278045 -110038720 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr10 30278562 30278592 -110038173 + AT_rich Low_complexity Low_complexity 1 30 0 462 316 47 26 chr10 30279439 30279629 -110037136 - MIR SINE MIR -62 200 7 2197 107 3 3 chr10 30279662 30279951 -110036814 - AluSx SINE Alu -11 301 13 378 0 0 0 chr10 30280026 30280068 -110036697 + (TG)n Simple_repeat Simple_repeat 2 43 0 188 33 0 33 chr10 30280454 30280484 -110036281 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1599 187 7 10 chr10 30280970 30281082 -110035683 + AluJo SINE Alu 22 133 -179 2400 77 3 0 chr10 30281082 30281381 -110035384 + AluY SINE Alu 1 300 -11 1599 187 7 10 chr10 30281381 30281557 -110035208 + AluJo SINE Alu 133 309 -3 706 209 0 0 chr10 30281640 30281790 -110034975 + FLAM_C SINE Alu 1 150 0 401 264 40 0 chr10 30281960 30282085 -110034680 - L2 LINE L2 -7 3306 3177 1941 175 26 6 chr10 30282147 30282490 -110034275 + MLT1A1 LTR MaLR 16 365 0 809 270 83 0 chr10 30282560 30282812 -110033953 - Charlie4a DNA MER1_type 0 508 236 546 211 89 83 chr10 30282883 30283035 -110033730 - MIR SINE MIR -73 189 34 1506 173 0 4 chr10 30283035 30283266 -110033499 - AluJb SINE Alu -77 235 6 546 211 89 83 chr10 30283266 30283293 -110033472 - MIR SINE MIR -228 34 9 1839 149 0 56 chr10 30283446 30283563 -110033202 + AluJo SINE Alu 1 123 -189 2275 123 0 0 chr10 30283563 30283871 -110032894 - AluSx SINE Alu -4 308 1 1839 149 0 56 chr10 30283871 30284074 -110032691 + AluJo SINE Alu 123 303 -9 225 0 0 0 chr10 30285309 30285334 -110031431 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 30285656 30285677 -110031088 + AT_rich Low_complexity Low_complexity 1 21 0 2400 55 0 10 chr10 30287441 30287730 -110029035 + AluY SINE Alu 18 303 -8 307 255 81 36 chr10 30288202 30288328 -110028437 + L1ME LINE L1 1 131 -5939 452 200 24 0 chr10 30288329 30288414 -110028351 + FAM SINE Alu 1 78 -98 410 237 11 32 chr10 30288446 30288539 -110028226 + FAM SINE Alu 81 171 -4 1674 199 0 19 chr10 30288722 30289038 -110027727 - AluJo SINE Alu -2 310 1 497 261 82 0 chr10 30289119 30289253 -110027512 + L2 LINE L2 3168 3312 -1 1975 149 7 0 chr10 30289647 30289952 -110026813 - AluSx SINE Alu 0 307 1 309 51 0 0 chr10 30290317 30290356 -110026409 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 248 143 0 chr10 30290643 30290748 -110026017 - MIR SINE MIR -1 261 142 1958 159 0 3 chr10 30290751 30291040 -110025725 - AluJo SINE Alu -24 288 1 2259 98 7 10 chr10 30291215 30291522 -110025243 - AluSq SINE Alu -7 306 1 2172 117 0 26 chr10 30291988 30292295 -110024470 + AluSx SINE Alu 1 299 -13 1406 234 54 22 chr10 30292935 30293303 -110023462 - MLT1F LTR MaLR 0 542 163 832 29 0 39 chr10 30293305 30293408 -110023357 - AluY SINE Alu -16 295 197 536 243 181 7 chr10 30293408 30293552 -110023213 - MLT1F LTR MaLR -371 171 3 307 306 52 17 chr10 30293624 30293797 -110022968 + L1M4 LINE L1 2909 3087 -3059 915 192 6 12 chr10 30293806 30293973 -110022792 + FRAM SINE Alu 1 166 0 1845 90 0 90 chr10 30293974 30294262 -110022503 - AluY SINE Alu -49 262 1 244 242 11 33 chr10 30294316 30294407 -110022358 + L1M4 LINE L1 3202 3290 -2856 1060 163 0 11 chr10 30294441 30294619 -110022146 + FRAM SINE Alu 1 176 0 1201 110 0 0 chr10 30294701 30294864 -110021901 + AluSg/x SINE Alu 142 304 -6 432 0 0 0 chr10 30294903 30294951 -110021814 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30295016 30295133 -110021632 - L2 LINE L2 0 3313 3186 2170 106 7 13 chr10 30295162 30295464 -110021301 - AluSx SINE Alu -12 300 1 2617 53 0 0 chr10 30295907 30296211 -110020554 + AluY SINE Alu 1 304 -7 1905 153 13 3 chr10 30296324 30296632 -110020133 + AluJb SINE Alu 2 312 0 2503 32 6 41 chr10 30296931 30297245 -110019520 + AluY SINE Alu 1 303 -8 1683 168 68 7 chr10 30297357 30297649 -110019116 - AluJo SINE Alu -2 310 1 349 329 7 0 chr10 30297702 30297839 -110018926 - LTR67 LTR ERVL -2 555 418 228 83 62 0 chr10 30298226 30298274 -110018491 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30298593 30298893 -110017872 + AluSx SINE Alu 1 297 -15 675 306 41 18 chr10 30299209 30299549 -110017216 - L2 LINE L2 -104 3209 2862 2697 98 3 11 chr10 30299611 30299978 -110016787 + THE1B LTR MaLR 1 364 0 1898 146 9 19 chr10 30300199 30300514 -110016251 + AluJo SINE Alu 1 312 0 432 0 0 0 chr10 30301355 30301403 -110015362 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30301468 30301585 -110015180 - L2 LINE L2 0 3313 3186 2000 88 22 18 chr10 30301614 30301886 -110014879 - AluSc SINE Alu -10 299 27 209 145 87 0 chr10 30301942 30302011 -110014754 + GA-rich Low_complexity Low_complexity 2 76 0 2130 120 3 13 chr10 30302653 30302961 -110013804 + AluSx SINE Alu 1 305 -7 1258 221 0 41 chr10 30303592 30303886 -110012879 - AluJo SINE Alu 0 312 31 2075 120 0 23 chr10 30304439 30304738 -110012027 + AluSx SINE Alu 1 292 -20 24 0 0 0 chr10 30304738 30304762 -110012003 + AT_rich Low_complexity Low_complexity 1 24 0 446 295 52 80 chr10 30305591 30305842 -110010923 + L1ME LINE L1 3703 3946 -2200 10151 163 24 1 chr10 30306069 30308562 -110008203 - L1PA13 LINE L1 -11 6152 3607 617 253 84 69 chr10 30308623 30308825 -110007940 + MLT1G1 LTR MaLR 150 392 -176 231 223 75 53 chr10 30308850 30308944 -110007821 + MLT1H LTR MaLR 456 595 0 901 221 22 40 chr10 30309064 30309290 -110007475 - MER58A DNA MER1_type -1 223 2 1022 281 113 73 chr10 30309342 30309702 -110007063 - L2 LINE L2 -821 2493 2149 2646 157 19 32 chr10 30309702 30310134 -110006631 + MSTB LTR MaLR 1 426 0 1022 281 113 73 chr10 30310134 30310461 -110006304 - L2 LINE L2 -1165 2149 1778 282 304 94 12 chr10 30310678 30310849 -110005916 + L1ME LINE L1 4006 4190 -1956 919 187 8 92 chr10 30310912 30311163 -110005602 + MER63C DNA MER1_type 255 484 -446 407 159 14 0 chr10 30311164 30311233 -110005532 - MSTB2 LTR MaLR 0 457 388 1668 162 0 18 chr10 30311233 30311505 -110005260 + AluJb SINE Alu 1 267 -45 904 104 35 12 chr10 30311507 30311680 -110005085 + GA-rich Low_complexity Low_complexity 4 180 0 182 171 24 0 chr10 30311705 30311746 -110005019 + A-rich Low_complexity Low_complexity 3 44 0 2158 144 83 19 chr10 30311750 30312124 -110004641 - MSTB2 LTR MaLR -57 400 3 1934 167 8 25 chr10 30312125 30312490 -110004275 + MER63C DNA MER1_type 481 839 -91 612 209 31 31 chr10 30312492 30312655 -110004110 + MER63C DNA MER1_type 767 929 -1 27 0 0 0 chr10 30312855 30312882 -110003883 + AT_rich Low_complexity Low_complexity 1 27 0 622 205 42 18 chr10 30312895 30313061 -110003704 + L1ME LINE L1 4490 4659 -1487 2136 93 0 0 chr10 30313549 30313817 -110002948 - AluSc SINE Alu -41 268 1 434 249 102 27 chr10 30313827 30314015 -110002750 + L1ME LINE L1 5146 5369 -793 997 209 104 14 chr10 30314015 30314312 -110002453 - MER33 DNA MER1_type 0 324 1 434 249 102 27 chr10 30314312 30314443 -110002322 + L1ME LINE L1 5369 5489 -673 1180 210 0 5 chr10 30314507 30314726 -110002039 + AluJb SINE Alu 87 304 -8 200 239 22 0 chr10 30314730 30314776 -110001989 + GA-rich Low_complexity Low_complexity 2 48 0 2327 83 0 32 chr10 30315298 30315610 -110001155 - AluY SINE Alu -9 302 1 1013 268 40 43 chr10 30315987 30316360 -110000405 - MER110 LTR ERV1 -15 476 105 2033 140 0 10 chr10 30316650 30316958 -109999807 + AluSx SINE Alu 5 309 -3 229 270 110 0 chr10 30316986 30317086 -109999679 + MLT1L LTR MaLR 487 597 -18 397 336 55 23 chr10 30317168 30317388 -109999377 - L2 LINE L2 -480 2834 2608 404 283 20 0 chr10 30317442 30317541 -109999224 - L2 LINE L2 0 3313 3213 199 200 0 44 chr10 30317641 30317686 -109999079 - MIR SINE MIR -103 159 117 839 182 0 0 chr10 30317702 30317834 -109998931 + FLAM_A SINE Alu 1 132 -1 1884 146 9 19 chr10 30318036 30318351 -109998414 - AluJo SINE Alu 0 312 1 2839 98 3 11 chr10 30318572 30318939 -109997826 - THE1B LTR MaLR 0 364 1 763 306 41 18 chr10 30319001 30319341 -109997424 + L2 LINE L2 2862 3209 -104 1867 167 0 10 chr10 30319657 30319957 -109996808 - AluSx SINE Alu -15 297 1 228 83 62 0 chr10 30320276 30320324 -109996441 + (TA)n Simple_repeat Simple_repeat 2 52 0 195 214 45 79 chr10 30320333 30320422 -109996343 + L2 LINE L2 2211 2296 -1018 355 329 7 0 chr10 30320711 30320848 -109995917 + LTR67 LTR ERVL 418 555 -2 1717 161 68 7 chr10 30320901 30321193 -109995572 + AluJo SINE Alu 1 310 -2 2462 35 6 41 chr10 30321305 30321619 -109995146 - AluY SINE Alu -8 303 1 1849 159 13 3 chr10 30321916 30322224 -109994541 - AluJb SINE Alu 0 312 2 2603 49 0 0 chr10 30322337 30322641 -109994124 - AluY SINE Alu -7 304 1 2284 109 3 0 chr10 30323084 30323395 -109993370 + AluSx SINE Alu 1 312 0 181 191 0 85 chr10 30323409 30323456 -109993309 + MER5A DNA MER1_type 43 85 -104 1452 181 0 15 chr10 30323861 30324126 -109992639 + AluJo SINE Alu 44 304 -8 567 0 0 0 chr10 30324127 30324190 -109992575 + (GGAAA)n Simple_repeat Simple_repeat 1 63 0 2093 127 0 0 chr10 30324239 30324577 -109992188 - AluSx SINE Alu 0 338 1 191 125 62 0 chr10 30324942 30324974 -109991791 - MIR SINE MIR -113 149 116 1315 195 13 42 chr10 30325761 30325926 -109990839 + L1ME1 LINE L1 5276 5444 -722 1910 101 7 61 chr10 30325926 30326072 -109990693 + AluSg SINE Alu 1 153 -159 2799 3 0 0 chr10 30326072 30326370 -109990395 + AluYa5 SINE Alu 1 298 -13 1910 101 7 61 chr10 30326370 30326551 -109990214 + AluSg SINE Alu 153 312 0 2413 56 3 37 chr10 30326554 30326876 -109989889 + AluY SINE Alu 1 311 0 1315 195 13 42 chr10 30326876 30327013 -109989752 + L1ME1 LINE L1 5446 5574 -592 1174 219 40 92 chr10 30327016 30327495 -109989270 + L1ME1 LINE L1 5685 6301 -33 1565 176 16 38 chr10 30327521 30327840 -109988925 - AluJo SINE Alu 0 312 1 188 260 110 27 chr10 30327999 30328072 -109988693 - L2 LINE L2 0 3272 3194 1450 90 30 5 chr10 30328610 30328810 -109987955 + AluSc SINE Alu 96 300 -9 186 43 0 0 chr10 30328813 30328836 -109987929 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1496 170 28 60 chr10 30328912 30329229 -109987536 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 30329507 30329535 -109987230 + AT_rich Low_complexity Low_complexity 1 28 0 2152 122 0 0 chr10 30329541 30329829 -109986936 - AluSx SINE Alu -24 288 1 263 320 7 34 chr10 30330069 30330216 -109986549 + GA-rich Low_complexity Low_complexity 6 148 0 4136 147 6 14 chr10 30330268 30330915 -109985850 - LTR48B LTR ERV1 -2 642 1 565 205 34 0 chr10 30331014 30331131 -109985634 + L1PB4 LINE L1 6033 6153 -3 1964 169 0 0 chr10 30331139 30331441 -109985324 + AluJb SINE Alu 1 302 -10 1538 166 63 0 chr10 30332084 30332368 -109984397 - AluJo SINE Alu -9 303 2 2309 119 0 0 chr10 30333101 30333412 -109983353 - AluSx SINE Alu -1 311 1 2385 77 7 7 chr10 30333570 30333870 -109982895 - AluSc SINE Alu -9 300 1 1125 132 9 71 chr10 30334156 30334368 -109982397 + AluJo SINE Alu 1 199 -113 1454 120 0 0 chr10 30334379 30334571 -109982194 + AluSg/x SINE Alu 112 303 -9 892 188 38 0 chr10 30334571 30334731 -109982034 + AluJo/FRAM SINE Alu 134 299 -13 209 234 16 0 chr10 30334731 30334795 -109981970 + GA-rich Low_complexity Low_complexity 1 65 0 384 245 63 15 chr10 30334796 30334944 -109981821 - L2 LINE L2 -263 3009 2859 683 321 11 5 chr10 30335104 30335294 -109981471 - MER91A DNA MER1_type -2 194 4 1975 190 76 66 chr10 30335519 30335789 -109980976 - MLT1D LTR MaLR 0 505 226 390 21 0 0 chr10 30335789 30335836 -109980929 + (CA)n Simple_repeat Simple_repeat 1 47 0 1975 190 76 66 chr10 30335836 30336065 -109980700 - MLT1D LTR MaLR -279 226 1 3344 97 41 0 chr10 30336193 30336656 -109980109 + L1PA16 LINE L1 5676 6157 -9 22 0 0 0 chr10 30336656 30336678 -109980087 + AT_rich Low_complexity Low_complexity 1 22 0 182 286 170 36 chr10 30336847 30336959 -109979806 + MIR SINE MIR 19 145 -63 1372 201 33 33 chr10 30337011 30337315 -109979450 + AluJo SINE Alu 1 304 -8 555 328 20 10 chr10 30337381 30337576 -109979189 - MIR SINE MIR -55 207 11 2158 133 0 0 chr10 30337593 30337894 -109978871 + AluSx SINE Alu 1 301 -11 257 192 77 0 chr10 30337894 30337972 -109978793 - L1MC4 LINE L1 -1346 6696 6613 253 179 18 36 chr10 30338986 30339042 -109977723 - L2 LINE L2 -75 3238 3184 211 198 70 0 chr10 30339063 30339149 -109977616 + (TA)n Simple_repeat Simple_repeat 2 93 0 1717 114 107 4 chr10 30339272 30339544 -109977221 - AluSx SINE Alu -12 300 1 626 253 15 64 chr10 30340202 30340404 -109976361 - MIR SINE MIR -58 204 13 2002 146 3 3 chr10 30340712 30341007 -109975758 + AluJb SINE Alu 1 295 -17 864 198 122 10 chr10 30341894 30342091 -109974674 - MIR SINE MIR -26 236 18 2191 107 0 0 chr10 30342107 30342427 -109974338 - AluY SINE Alu 0 320 1 341 257 78 49 chr10 30342465 30342710 -109974055 + L1ME4a LINE L1 5869 6120 -1 2177 123 10 0 chr10 30342913 30343214 -109973551 - AluSx SINE Alu -8 304 1 1699 160 35 7 chr10 30344209 30344491 -109972274 - AluJb SINE Alu -22 290 1 1731 99 9 105 chr10 30344504 30344559 -109972206 - L1MB4 LINE L1 -2 6178 6119 1741 143 16 50 chr10 30344559 30344881 -109971884 + AluJo SINE Alu 1 311 -1 1731 99 9 105 chr10 30344881 30345060 -109971705 - L1MB4 LINE L1 -61 6119 5983 1925 161 3 0 chr10 30345060 30345359 -109971406 - AluJb SINE Alu -12 300 1 1731 99 9 105 chr10 30345359 30345455 -109971310 - L1MB4 LINE L1 -197 5983 5879 1007 180 43 36 chr10 30345455 30345677 -109971088 - MLT2B1 LTR ERVL -10 510 283 2143 97 3 3 chr10 30346770 30347058 -109969707 - AluSx SINE Alu -16 296 9 1435 170 51 16 chr10 30347399 30347637 -109969128 + MER33 DNA MER1_type 1 243 -2342 1661 160 7 14 chr10 30347637 30347931 -109968834 - AluJb SINE Alu -20 292 1 1435 170 51 16 chr10 30347931 30348011 -109968754 + MER33 DNA MER1_type 243 319 -5 494 283 41 97 chr10 30348028 30348297 -109968468 - MIR SINE MIR 0 262 9 1143 130 0 0 chr10 30349138 30349442 -109967323 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 208 358 32 0 chr10 30349443 30349538 -109967227 - L2 LINE L2 -49 3264 3167 1815 168 6 16 chr10 30349556 30349872 -109966893 - MER4D LTR ERV1 -11 892 580 479 131 0 91 chr10 30349923 30350054 -109966711 - MER4E LTR ERV1 -589 283 62 * 1604 142 77 4 chr10 30350040 30350314 -109966451 - MER49 LTR ERV1 -629 294 1 460 314 48 72 chr10 30350451 30350479 -109966286 - L2 LINE L2 -345 2969 2942 3974 141 51 2 chr10 30350479 30351082 -109965683 + MER41B LTR ERV1 2 634 -1 460 314 48 72 chr10 30351082 30351387 -109965378 - L2 LINE L2 -372 2942 2644 506 239 131 11 chr10 30352119 30352295 -109964470 + LTR33 LTR ERVL 5 201 -320 1575 154 22 11 chr10 30352299 30352571 -109964194 + AluJo SINE Alu 5 279 -33 318 216 0 0 chr10 30352613 30352687 -109964078 + G-rich Low_complexity Low_complexity 2 75 0 276 188 0 0 chr10 30352705 30352774 -109963991 + A-rich Low_complexity Low_complexity 1 69 0 331 254 127 24 chr10 30352785 30352911 -109963854 + L1MCa LINE L1 1162 1300 -5126 4036 194 44 19 chr10 30353189 30354166 -109962599 + L1PA11 LINE L1 3161 4161 -1985 6327 107 13 1 chr10 30354600 30355718 -109961047 + L1PA11 LINE L1 5043 6174 0 836 142 119 135 chr10 30355707 30356010 -109960755 + L1MB2 LINE L1 5478 5775 -525 * 1900 157 9 15 chr10 30356117 30356449 -109960316 + L1MB2 LINE L1 5835 6164 -7 939 259 91 3 chr10 30356456 30356753 -109960012 - L2 LINE L2 -609 2705 2383 1220 269 25 11 chr10 30356754 30357119 -109959646 + ERVL LTR ERVL 4324 4693 -1071 1379 122 0 69 chr10 30357331 30357467 -109959298 - L1M2 LINE L1 -559 5741 5597 2482 60 0 3 chr10 30357467 30357767 -109958998 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30357767 30358072 -109958693 - AluSg SINE Alu -4 306 1 1379 122 0 69 chr10 30358072 30358179 -109958586 - L1M2 LINE L1 -701 5599 5514 2334 97 0 10 chr10 30358180 30358479 -109958286 + AluSx SINE Alu 2 297 -15 738 143 0 0 chr10 30358510 30358622 -109958143 - AluJb SINE Alu -9 303 192 1749 144 0 0 chr10 30359012 30359269 -109957496 + Tigger3(Golem) DNA MER2_type 2769 3025 -4 1053 236 91 15 chr10 30359596 30359994 -109956771 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30359991 30360058 -109956707 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30360250 30360296 -109956469 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30360296 30360362 -109956403 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30360362 30360447 -109956318 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 4568 164 32 66 chr10 30360448 30360954 -109955811 - L1MB1 LINE L1 -65 6103 5581 2477 82 0 0 chr10 30360954 30361260 -109955505 - AluY SINE Alu -5 306 1 4568 164 32 66 chr10 30361260 30361440 -109955325 - L1MB1 LINE L1 -587 5581 5396 264 30 0 0 chr10 30361440 30361473 -109955292 + (TG)n Simple_repeat Simple_repeat 2 34 0 4568 164 32 66 chr10 30361473 30362604 -109954161 - L1MB1 LINE L1 -772 5396 4358 1203 292 63 60 chr10 30362730 30363027 -109953738 - L1M3d LINE L1 -5230 661 366 2296 51 27 0 chr10 30363027 30363323 -109953442 - AluY SINE Alu -7 304 1 1203 292 63 60 chr10 30363323 30363676 -109953089 - L1M3d LINE L1 -5525 366 9 189 0 0 0 chr10 30363684 30363705 -109953060 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30363704 30363741 -109953024 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30363743 30364036 -109952729 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30364039 30364329 -109952436 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30364329 30364667 -109952098 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30364667 30364970 -109951795 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30365116 30365202 -109951563 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30365347 30365640 -109951125 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30365662 30366000 -109950765 - L1MC5 LINE L1 -60 7901 7564 554 154 0 0 chr10 30366096 30366187 -109950578 + L1MB3 LINE L1 5764 5854 -329 2510 168 13 49 chr10 30366344 30366361 -109950404 + L1MA6 LINE L1 5763 5779 -521 2053 143 3 10 chr10 30366361 30366668 -109950097 + AluSx SINE Alu 1 305 -7 2510 168 13 49 chr10 30366668 30366680 -109950085 + L1MA6 LINE L1 5779 5790 -510 270 81 0 0 chr10 30366680 30366717 -109950048 + (CA)n Simple_repeat Simple_repeat 2 38 0 2510 168 13 49 chr10 30366717 30366877 -109949888 + L1MA6 LINE L1 5790 5954 -346 2158 74 0 45 chr10 30366877 30367187 -109949578 + AluY SINE Alu 1 296 -15 2510 168 13 49 chr10 30367187 30367334 -109949431 + L1MA6 LINE L1 5954 6105 -195 2399 124 14 8 chr10 30367334 30367696 -109949069 - THE1B LTR MaLR 0 364 1 2510 168 13 49 chr10 30367696 30367905 -109948860 + L1MA6 LINE L1 6105 6291 -9 865 118 22 7 chr10 30368612 30368747 -109948018 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30368864 30368900 -109947865 + AT_rich Low_complexity Low_complexity 1 36 0 1464 167 0 20 chr10 30369986 30370237 -109946528 - AluJb SINE Alu -2 310 65 1375 230 92 72 chr10 30370756 30371145 -109945620 + L1M3d LINE L1 684 1064 -4827 2032 147 0 10 chr10 30371145 30371444 -109945321 + AluJo SINE Alu 1 296 -16 1375 230 92 72 chr10 30371444 30371552 -109945213 + L1M3d LINE L1 1064 1168 -4723 1906 144 18 4 chr10 30371552 30371878 -109944887 + AluSx SINE Alu 1 330 0 1375 230 92 72 chr10 30371878 30371978 -109944787 + L1M3d LINE L1 1168 1295 -4596 1839 207 70 27 chr10 30371982 30372422 -109944343 + LTR2B LTR ERV1 32 490 0 3449 262 44 37 chr10 30372423 30373210 -109943555 + L1 LINE L1 2542 3322 -4243 2113 129 7 0 chr10 30373210 30373529 -109943236 - AluSx SINE Alu 0 321 1 3449 262 44 37 chr10 30373529 30373850 -109942915 + L1 LINE L1 3322 3639 -3926 2262 109 0 3 chr10 30373850 30374153 -109942612 - AluSx SINE Alu -10 302 1 3449 262 44 37 chr10 30374153 30375077 -109941688 + L1 LINE L1 3639 4593 -2972 913 159 0 6 chr10 30375081 30375251 -109941514 + L1 LINE L1 5634 5802 -1763 2233 89 18 0 chr10 30375252 30375532 -109941233 + AluSg SINE Alu 1 285 -25 609 144 0 0 chr10 30375845 30375942 -109940823 - FRAM SINE Alu -11 165 69 738 129 11 140 chr10 30375944 30376122 -109940643 - MER20 DNA MER1_type -64 155 1 1747 199 3 3 chr10 30376212 30376514 -109940251 - AluJb SINE Alu -8 304 3 2369 98 0 0 chr10 30376597 30376904 -109939861 - AluY SINE Alu -4 307 1 1073 154 36 64 chr10 30376906 30377126 -109939639 - AluJo SINE Alu -17 295 82 1477 157 68 6 chr10 30377126 30377439 -109939326 - L1PA16 LINE L1 0 6154 5801 2094 140 0 7 chr10 30377480 30377780 -109938985 + AluSx SINE Alu 1 298 -14 2911 160 39 30 chr10 30378289 30378832 -109937933 - MLT2B3 LTR ERVL -6 548 1 1693 129 0 24 chr10 30378832 30379087 -109937678 + AluSx SINE Alu 48 296 -16 863 132 0 0 chr10 30379089 30379203 -109937562 + AluSq/x SINE Alu 1 114 -199 288 158 0 0 chr10 30379204 30379261 -109937504 + A-rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr10 30379334 30379355 -109937410 + (T)n Simple_repeat Simple_repeat 1 21 0 2488 21 45 3 chr10 30379779 30380067 -109936698 - AluY SINE Alu -11 300 1 2364 86 0 7 chr10 30380719 30381021 -109935744 + AluY SINE Alu 1 300 -11 1546 97 21 8 chr10 30381028 30381265 -109935500 + LTR7 LTR ERV1 211 450 0 451 300 56 50 chr10 30381452 30381860 -109934905 - L1ME4a LINE L1 -153 5968 5562 2361 85 3 0 chr10 30381869 30382163 -109934602 - AluSp SINE Alu -18 295 1 2230 91 0 17 chr10 30382215 30382511 -109934254 - AluSx SINE Alu -9 303 13 484 254 7 36 chr10 30383269 30383407 -109933358 - MER94 DNA DNA 0 134 1 502 191 197 0 chr10 30384238 30384385 -109932380 - MIR SINE MIR -1 261 86 1979 107 70 4 chr10 30384629 30384901 -109931864 - AluSg SINE Alu -20 290 1 405 200 0 0 chr10 30384930 30385000 -109931765 + AluJ/FLAM SINE Alu 3 72 -230 1654 286 17 11 chr10 30385019 30385553 -109931212 - LTR48B LTR ERV1 -2 642 106 188 282 155 0 chr10 30385916 30385987 -109930778 - MIR SINE MIR -150 112 31 887 121 0 0 chr10 30386106 30386230 -109930535 + FRAM SINE Alu 47 170 -6 225 368 88 7 chr10 30386408 30386544 -109930221 + L2 LINE L2 3115 3261 -11 870 249 61 9 chr10 30386694 30386907 -109929858 + MER58A DNA MER1_type 1 224 0 388 304 30 15 chr10 30386921 30387056 -109929709 - L2 LINE L2 0 3272 3136 1296 110 75 35 chr10 30387104 30387331 -109929434 + MER46A DNA MER2_type 1 236 0 1619 186 3 10 chr10 30387390 30387680 -109929085 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30387683 30387706 -109929059 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 30387712 30387734 -109929031 + AT_rich Low_complexity Low_complexity 1 22 0 235 365 109 21 chr10 30387857 30388049 -109928716 - L2 LINE L2 -337 2977 2769 2198 117 0 10 chr10 30388086 30388386 -109928379 + AluSx SINE Alu 1 297 -15 1299 102 0 0 chr10 30388407 30388573 -109928192 + AluSg/x SINE Alu 135 300 -12 406 333 61 21 chr10 30388586 30388865 -109927900 - L2 LINE L2 -798 2516 2227 21 36 0 0 chr10 30389553 30389581 -109927184 + AT_rich Low_complexity Low_complexity 1 28 0 2573 59 10 0 chr10 30389581 30389886 -109926879 + AluY SINE Alu 1 308 -3 868 264 24 0 chr10 30389917 30390129 -109926636 - AluJo SINE Alu -92 220 4 2315 106 3 3 chr10 30390762 30391074 -109925691 + AluSx SINE Alu 1 312 0 434 187 44 0 chr10 30391587 30391678 -109925087 - L1ME3A LINE L1 -12 6158 6064 2264 103 0 7 chr10 30391986 30392286 -109924479 - AluSc SINE Alu -11 298 1 723 181 8 0 chr10 30393447 30393574 -109923191 - FLAM_A SINE Alu -5 128 1 1760 138 4 14 chr10 30394190 30394466 -109922299 + AluJo SINE Alu 39 311 -1 1187 120 0 0 chr10 30395042 30395209 -109921556 - AluY SINE Alu -11 300 134 2398 78 0 0 chr10 30395678 30395974 -109920791 - AluY SINE Alu -15 296 1 401 167 0 26 chr10 30396171 30396249 -109920516 + LTR33 LTR ERVL 446 521 0 2204 100 3 0 chr10 30396625 30396952 -109919813 + AluSp SINE Alu 2 329 0 1064 261 4 11 chr10 30396952 30397201 -109919564 - MIR SINE MIR -8 254 5 2105 122 0 0 chr10 30397403 30397691 -109919074 + AluSx SINE Alu 23 310 -2 243 253 47 93 chr10 30397866 30397971 -109918794 - MER5A DNA MER1_type -1 188 91 1682 166 155 59 chr10 30397971 30398086 -109918679 + MLT1D LTR MaLR 3 106 -399 2076 113 74 0 chr10 30398086 30398370 -109918395 + AluSq SINE Alu 1 305 -8 1682 166 155 59 chr10 30398370 30398711 -109918054 + MLT1D LTR MaLR 106 503 -2 243 253 47 93 chr10 30398711 30398755 -109918010 - MER5A DNA MER1_type -98 91 46 3464 155 4 6 chr10 30398755 30399279 -109917486 + MER1A DNA MER1_type 1 523 -4 192 217 101 43 chr10 30399593 30399611 -109917154 + MIR SINE MIR 79 95 -167 1717 225 14 100 chr10 30399611 30399994 -109916771 - LTR26B LTR ERV1 -3 528 113 1691 172 0 27 chr10 30399994 30400291 -109916474 + AluJo SINE Alu 1 289 -23 189 0 0 0 chr10 30400294 30400315 -109916450 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1717 225 14 100 chr10 30400315 30400505 -109916260 - LTR26B LTR ERV1 -420 111 1 192 217 101 43 chr10 30400505 30400555 -109916210 + MIR SINE MIR 95 151 -111 309 285 85 8 chr10 30400608 30400738 -109916027 + L1M4 LINE L1 3850 3989 -2157 2074 136 0 10 chr10 30400893 30401188 -109915577 - AluSx SINE Alu -20 292 1 25 31 0 0 chr10 30401901 30401933 -109914832 + AT_rich Low_complexity Low_complexity 1 32 0 842 139 0 16 chr10 30402142 30402271 -109914494 + FLAM_C SINE Alu 1 127 -16 2112 131 20 0 chr10 30402388 30402686 -109914079 - AluSx SINE Alu -6 306 3 233 216 0 27 chr10 30402920 30402994 -109913771 + CT-rich Low_complexity Low_complexity 2 73 0 2134 125 0 3 chr10 30403334 30403631 -109913134 - AluSx SINE Alu -16 296 1 2233 104 0 0 chr10 30404206 30404493 -109912272 + AluY SINE Alu 1 287 -24 5600 132 15 26 chr10 30404495 30405342 -109911423 - L1PA16 LINE L1 -4 6162 5325 1610 195 21 7 chr10 30405342 30405629 -109911136 - AluJo SINE Alu -21 291 1 5600 132 15 26 chr10 30405629 30405754 -109911011 - L1PA16 LINE L1 -841 5325 5200 2871 102 9 47 chr10 30405803 30405851 -109910914 + MER57B LTR ERV1 1 49 -385 2143 89 34 3 chr10 30405851 30406143 -109910622 - AluSq SINE Alu -12 301 1 2871 102 9 47 chr10 30406143 30406545 -109910220 + MER57B LTR ERV1 49 434 0 237 307 87 31 chr10 30407838 30407907 -109908858 - L2 LINE L2 -5 3308 3244 2504 75 0 3 chr10 30407907 30408212 -109908553 + AluSp SINE Alu 1 304 -9 237 307 87 31 chr10 30408212 30408269 -109908496 - L2 LINE L2 -69 3244 3175 2154 159 75 31 chr10 30408364 30408842 -109907923 - MLT1D LTR MaLR 0 505 7 204 368 78 19 chr10 30409149 30409407 -109907358 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30409421 30409586 -109907179 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30410115 30410469 -109906296 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30410623 30410734 -109906031 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30410822 30410879 -109905886 + AluJ/monomer SINE Alu 244 301 -1 2205 117 0 0 chr10 30410956 30411254 -109905511 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr10 30411254 30411278 -109905487 + AT_rich Low_complexity Low_complexity 1 24 0 1976 144 23 0 chr10 30411712 30412017 -109904748 + AluSx SINE Alu 1 312 0 1731 167 17 20 chr10 30412035 30412334 -109904431 + AluJo SINE Alu 3 300 -12 918 98 17 23 chr10 30412360 30412534 -109904231 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 655 264 73 41 chr10 30412695 30413080 -109903685 + MLT1J2 LTR MaLR 22 409 0 1163 220 0 0 chr10 30413168 30413395 -109903370 - AluJo SINE Alu -7 305 79 2629 45 0 6 chr10 30413695 30414006 -109902759 - AluY SINE Alu -2 309 1 1909 130 46 0 chr10 30414006 30414290 -109902475 - AluSx SINE Alu -14 298 2 643 278 144 17 chr10 30414305 30414722 -109902043 - L1MC/D LINE L1 -2081 5727 5258 1936 139 39 32 chr10 30414889 30415199 -109901566 - AluSx SINE Alu 0 312 1 821 103 0 0 chr10 30415204 30415311 -109901454 - AluSq/x SINE Alu -205 107 1 674 271 33 19 chr10 30415456 30415670 -109901095 - U3 snRNA snRNA 0 217 1 818 162 6 0 chr10 30415749 30415928 -109900837 + CT-rich Low_complexity Low_complexity 1 180 0 695 170 9 6 chr10 30415948 30416309 -109900456 + CT-rich Low_complexity Low_complexity 1 362 0 255 125 0 0 chr10 30416876 30416916 -109899849 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2044 134 0 26 chr10 30417019 30417332 -109899433 + AluSx SINE Alu 6 310 -2 1695 189 10 3 chr10 30417505 30417807 -109898958 - AluJo SINE Alu -8 304 1 205 340 53 0 chr10 30418082 30418176 -109898589 + L2 LINE L2 3196 3294 -19 2005 135 0 4 chr10 30418713 30418994 -109897771 + AluSx SINE Alu 5 284 -28 976 204 0 57 chr10 30419013 30419243 -109897522 + MER20 DNA MER1_type 3 219 0 755 187 0 0 chr10 30419731 30419854 -109896911 + FLAM_A SINE Alu 1 123 -10 979 238 63 3 chr10 30419859 30420162 -109896603 - L1MC/D LINE L1 -970 5176 4856 2297 92 6 25 chr10 30420172 30420488 -109896277 + AluSp SINE Alu 1 310 -3 449 180 31 11 chr10 30420534 30420682 -109896083 + L1MC/D LINE L1 5183 5333 -838 724 199 8 0 chr10 30420682 30420813 -109895952 + FLAM_A SINE Alu 1 132 -1 1923 104 18 0 chr10 30420852 30421131 -109895634 + L1MC/D LINE L1 5315 5598 -735 280 114 0 0 chr10 30421131 30421175 -109895590 + Alu SINE Alu 255 298 -3 2296 120 0 0 chr10 30421285 30421594 -109895171 + AluSg SINE Alu 1 309 -1 2180 114 7 0 chr10 30421931 30422237 -109894528 - AluSx SINE Alu -2 310 3 2964 155 27 12 chr10 30422420 30422931 -109893834 + Tigger1 DNA MER2_type 1 519 -1899 4900 151 42 23 chr10 30422932 30423521 -109893244 - L1PB4 LINE L1 -76 6080 5503 1432 171 77 21 chr10 30423521 30423807 -109892958 - AluJo SINE Alu -10 302 1 4900 151 42 23 chr10 30423807 30423818 -109892947 - L1PB4 LINE L1 -653 5503 5494 2334 73 0 36 chr10 30423818 30424120 -109892645 - AluY SINE Alu -18 293 3 4900 151 42 23 chr10 30424120 30424578 -109892187 - L1PB4 LINE L1 -662 5494 4988 1561 125 27 0 chr10 30424578 30424802 -109891963 + MER30 DNA MER1_type 1 230 0 4900 151 42 23 chr10 30424802 30425083 -109891682 - L1PB4 LINE L1 -1168 4988 4714 3135 112 24 4 chr10 30425083 30425538 -109891227 + Tigger1 DNA MER2_type 1950 2413 -5 1211 255 105 20 chr10 30425599 30425991 -109890774 + MLT1J1 LTR MaLR 17 441 -5 2101 111 31 3 chr10 30426013 30426302 -109890463 - AluSx SINE Alu -15 297 1 492 318 130 12 chr10 30426308 30426638 -109890127 - L1MC4a LINE L1 -1930 5878 5510 504 218 79 71 chr10 30426942 30427371 -109889394 - MLT1H LTR MaLR 0 530 60 535 271 20 39 chr10 30427391 30427594 -109889171 - HERV16 LTR ERVL -1340 3656 3458 887 180 0 0 chr10 30427599 30427749 -109889016 - FRAM SINE Alu -3 173 24 1949 132 48 0 chr10 30428090 30428379 -109888386 + AluSx SINE Alu 1 303 -9 565 311 85 9 chr10 30428508 30428982 -109887783 - HERV16 LTR ERVL -2440 3214 2675 2286 122 3 0 chr10 30428988 30429292 -109887473 - AluSx SINE Alu -7 305 1 280 250 87 17 chr10 30429521 30429693 -109887072 - L1M1 LINE L1 -835 5468 5285 21 95 0 0 chr10 30429711 30429774 -109886991 + AT_rich Low_complexity Low_complexity 1 63 0 22 70 0 0 chr10 30429784 30429827 -109886938 + AT_rich Low_complexity Low_complexity 1 43 0 37 110 0 0 chr10 30429893 30430056 -109886709 + AT_rich Low_complexity Low_complexity 1 163 0 589 333 79 33 chr10 30430141 30430229 -109886536 + L2 LINE L2 1834 1916 -1398 2197 128 0 0 chr10 30430229 30430526 -109886239 + AluSx SINE Alu 1 297 -15 589 333 79 33 chr10 30430526 30430956 -109885809 + L2 LINE L2 1916 2376 -938 485 266 39 7 chr10 30430956 30431110 -109885655 + L2 LINE L2 1768 1926 -1388 1241 190 33 94 chr10 30431123 30431454 -109885311 - AluJo SINE Alu -1 311 1 263 318 48 21 chr10 30431459 30431648 -109885117 + L2 LINE L2 2842 3035 -237 1634 178 46 4 chr10 30432705 30432986 -109883779 + AluJo SINE Alu 1 293 -19 1347 307 30 22 chr10 30433550 30434229 -109882536 + ERVL LTR ERVL 2154 2852 -2633 1822 166 7 7 chr10 30434247 30434536 -109882229 + AluJo SINE Alu 1 289 -23 409 270 20 59 chr10 30434555 30434707 -109882058 + ERVL LTR ERVL 2949 3094 -2560 1262 288 30 30 chr10 30434737 30435203 -109881562 + ERVL LTR ERVL 3280 3745 -2019 2631 186 20 5 chr10 30435273 30435720 -109881045 - MER82 DNA MER2_type -1 652 199 332 102 0 0 chr10 30435807 30435856 -109880909 - MLT2B3 LTR ERVL -8 512 464 434 108 17 42 chr10 30435856 30435976 -109880789 + (TA)n Simple_repeat Simple_repeat 2 118 0 936 227 86 39 chr10 30436058 30436314 -109880451 - MLT2B3 LTR ERVL -286 268 1 608 266 0 0 chr10 30436583 30436722 -109880043 - MER82 DNA MER2_type -514 139 1 3028 92 34 75 chr10 30437046 30437778 -109878987 - MER51A LTR ERV1 0 634 1 1062 307 60 41 chr10 30437780 30438491 -109878274 + L2 LINE L2 1846 2570 -744 2111 102 20 36 chr10 30438927 30439231 -109877534 + AluSx SINE Alu 1 299 -13 1813 136 7 52 chr10 30440047 30440173 -109876592 + AluJo SINE Alu 5 135 -177 186 43 0 0 chr10 30440173 30440196 -109876569 + (TA)n Simple_repeat Simple_repeat 1 23 0 1813 136 7 52 chr10 30440196 30440377 -109876388 + AluJo SINE Alu 135 298 -14 312 27 0 0 chr10 30440386 30440423 -109876342 + (CA)n Simple_repeat Simple_repeat 2 38 0 365 358 81 11 chr10 30440797 30441068 -109875697 + L1MC/D LINE L1 5454 5743 -2065 235 254 15 15 chr10 30441098 30441165 -109875600 - MIR SINE MIR -24 238 172 338 261 0 9 chr10 30441177 30441198 -109875567 - L1MA4A LINE L1 -2 6301 5969 2217 106 0 29 chr10 30441198 30441510 -109875255 - AluSx SINE Alu -9 303 1 4956 127 20 1 chr10 30441510 30442267 -109874498 - L1PB4 LINE L1 -6 6150 5380 294 280 30 30 chr10 30442292 30442392 -109874373 - MIR SINE MIR -120 142 43 2368 84 0 47 chr10 30442400 30442722 -109874043 - AluSq SINE Alu -6 307 1 2209 128 0 0 chr10 30442888 30443186 -109873579 + AluSx SINE Alu 1 298 -14 1851 143 49 0 chr10 30443264 30443550 -109873215 + AluSq SINE Alu 1 300 -13 258 33 0 0 chr10 30443645 30443675 -109873090 - LTR6A LTR ERV1 -462 102 73 1116 137 0 19 chr10 30444748 30444909 -109871856 - FRAM SINE Alu -24 152 1 2106 134 0 0 chr10 30444928 30445219 -109871546 + AluSx SINE Alu 1 291 -21 475 350 30 18 chr10 30445287 30445537 -109871228 - MIR SINE MIR -9 253 3 718 179 32 0 chr10 30445995 30446118 -109870647 + AluJo/FLAM SINE Alu 1 127 -175 1433 175 52 4 chr10 30446120 30446389 -109870376 + AluJo SINE Alu 1 282 -30 1683 193 17 0 chr10 30446614 30446909 -109869856 - AluJb SINE Alu -12 300 1 210 105 0 0 chr10 30446920 30446958 -109869807 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 1835 142 0 62 chr10 30446960 30447269 -109869496 - AluJb SINE Alu -22 290 1 2397 48 45 0 chr10 30447342 30447631 -109869134 + AluY SINE Alu 1 302 -9 2379 98 0 13 chr10 30448251 30448567 -109868198 - AluSx SINE Alu 0 312 1 258 188 232 0 chr10 30448748 30448817 -109867948 - MLT1J2 LTR MaLR 0 450 366 577 245 177 10 chr10 30448888 30449080 -109867685 - MLT1J2 LTR MaLR -207 243 20 2139 179 6 0 chr10 30449128 30449492 -109867273 + MER47A DNA MER2_type 1 366 0 243 240 23 154 chr10 30450114 30450335 -109866430 - 7SK RNA RNA -1 192 1 1753 159 13 40 chr10 30450437 30450738 -109866027 + AluJo SINE Alu 7 299 -13 1639 168 50 18 chr10 30451110 30451269 -109865496 - AluJo SINE Alu -23 289 116 270 0 0 0 chr10 30451269 30451299 -109865466 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1639 168 50 18 chr10 30451299 30451419 -109865346 - AluJo SINE Alu -196 116 1 612 250 28 6 chr10 30451859 30452035 -109864730 + MIR SINE MIR 13 192 -70 1938 100 32 11 chr10 30452040 30452319 -109864446 + AluSq SINE Alu 5 289 -24 188 316 0 26 chr10 30452341 30452417 -109864348 + MIR SINE MIR 185 258 -4 2402 85 0 0 chr10 30452497 30452791 -109863974 + AluSp SINE Alu 1 294 -19 185 342 177 13 chr10 30452942 30453100 -109863665 + L2 LINE L2 2573 2756 -558 226 189 176 14 chr10 30453315 30453389 -109863376 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30453431 30453600 -109863165 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30453600 30453900 -109862865 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30453900 30454068 -109862697 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30454423 30454753 -109862012 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30454910 30454935 -109861830 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30454996 30455019 -109861746 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30455042 30455350 -109861415 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30455618 30455699 -109861066 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30455725 30455997 -109860768 + AluJo SINE Alu 28 300 -12 2172 106 0 0 chr10 30456205 30456489 -109860276 + AluSx SINE Alu 3 286 -26 337 294 40 8 chr10 30456753 30456879 -109859886 - MIR SINE MIR -72 190 61 2146 118 0 7 chr10 30458031 30458328 -109858437 + AluSx SINE Alu 1 295 -17 2570 70 0 0 chr10 30458631 30458931 -109857834 - AluSx SINE Alu -12 300 1 190 220 59 119 chr10 30459460 30459511 -109857254 - MIR SINE MIR -32 230 178 1646 167 36 14 chr10 30459511 30459787 -109856978 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 30459789 30459809 -109856956 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 190 220 59 119 chr10 30459809 30459872 -109856893 - MIR SINE MIR -85 177 120 1403 87 12 127 chr10 30459872 30460124 -109856641 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 30460647 30460675 -109856090 + AT_rich Low_complexity Low_complexity 1 28 0 1951 109 87 0 chr10 30462047 30462323 -109854442 + AluSx SINE Alu 1 300 -12 1770 173 56 0 chr10 30462824 30463148 -109853617 + MER2 DNA MER2_type 1 342 -2 2182 128 0 28 chr10 30463669 30463989 -109852776 - AluSx SINE Alu -1 311 1 731 302 20 8 chr10 30464225 30464473 -109852292 - MIR SINE MIR 0 262 12 385 263 0 21 chr10 30465872 30465967 -109850798 + MIR SINE MIR 47 139 -123 1229 105 0 0 chr10 30466120 30466282 -109850483 - AluSg/x SINE Alu -17 293 132 1149 100 0 0 chr10 30466282 30466432 -109850333 - Ricksha DNA DNA -1203 2043 1894 1656 142 0 0 chr10 30466432 30466672 -109850093 - AluSx SINE Alu -13 299 60 705 167 167 37 chr10 30466709 30466925 -109849840 - LTR65 LTR ERV1 -244 425 182 1270 139 0 0 chr10 30467056 30467236 -109849529 - FRAM SINE Alu -1 175 1 401 89 59 15 chr10 30469086 30469221 -109847544 + (TCTA)n Simple_repeat Simple_repeat 1 141 0 1593 196 11 0 chr10 30469221 30469496 -109847269 - AluJo SINE Alu -25 287 10 231 310 140 6 chr10 30470553 30470724 -109846041 + L2 LINE L2 2771 2964 -350 194 310 0 0 chr10 30470938 30470996 -109845769 + L2 LINE L2 3183 3240 -32 14588 124 42 6 chr10 30472987 30474916 -109841849 + Tigger1 DNA MER2_type 70 2093 -325 2197 114 3 3 chr10 30474916 30475214 -109841551 - AluSx SINE Alu -14 298 1 14588 124 42 6 chr10 30475214 30475551 -109841214 + Tigger1 DNA MER2_type 2093 2417 -1 618 261 11 27 chr10 30477477 30477661 -109839104 - MER5A DNA MER1_type 0 189 9 530 230 182 10 chr10 30477671 30477880 -109838885 + MIR SINE MIR 8 252 -10 1899 80 52 52 chr10 30478316 30478605 -109838160 - AluY SINE Alu -22 289 1 308 301 123 21 chr10 30478689 30478925 -109837840 + L2 LINE L2 3049 3308 -5 419 263 53 29 chr10 30479956 30480127 -109836638 + MER5B DNA MER1_type 3 177 -1 3815 124 116 9 chr10 30480316 30481000 -109835765 - Tigger3(Golem) DNA MER2_type -1 3028 2272 1951 117 3 27 chr10 30481007 30481307 -109835458 - AluSx SINE Alu -19 293 1 2161 126 0 3 chr10 30481858 30482159 -109834606 + AluSq SINE Alu 1 300 -13 270 247 86 74 chr10 30482174 30482336 -109834429 + L1MC5 LINE L1 7768 7931 -30 1893 176 0 0 chr10 30482512 30482813 -109833952 + AluSx SINE Alu 1 301 -11 273 278 189 39 chr10 30482844 30483024 -109833741 + L2 LINE L2 2592 2798 -516 2327 98 0 3 chr10 30483316 30483613 -109833152 - AluSx SINE Alu -16 296 1 246 211 18 0 chr10 30483690 30483747 -109833018 - AluJ/monomer SINE Alu -1 301 244 482 252 0 0 chr10 30483835 30483946 -109832819 - FRAM SINE Alu -65 111 1 2581 82 62 3 chr10 30484100 30484454 -109832311 + THE1C LTR MaLR 1 375 0 895 218 6 6 chr10 30484983 30485148 -109831617 - MER45A DNA AcHobo -13 165 1 204 368 78 19 chr10 30485162 30485420 -109831345 + L2 LINE L2 2332 2604 -710 2107 156 72 33 chr10 30485727 30486182 -109830583 + MLT1D LTR MaLR 7 479 -26 2166 122 0 0 chr10 30486651 30486939 -109829826 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr10 30486945 30486973 -109829792 + AT_rich Low_complexity Low_complexity 1 28 0 1503 170 28 60 chr10 30487251 30487568 -109829197 - AluJo SINE Alu -5 307 1 213 39 0 0 chr10 30487644 30487670 -109829095 + (TCC)n Simple_repeat Simple_repeat 3 28 0 2307 90 7 13 chr10 30487673 30487838 -109828927 - AluSc SINE Alu -11 298 134 2892 16 0 0 chr10 30487838 30488151 -109828614 - AluYb8 SINE Alu -5 313 1 2307 90 7 13 chr10 30488151 30488285 -109828480 - AluSc SINE Alu -175 134 1 2315 64 7 7 chr10 30488295 30488593 -109828172 - AluYa5 SINE Alu -13 298 1 900 75 14 96 chr10 30488593 30488739 -109828026 - AluSg SINE Alu -176 134 1 789 191 0 6 chr10 30488742 30488904 -109827861 - L1ME LINE L1 -730 5436 5276 2115 123 0 0 chr10 30490088 30490431 -109826334 + AluSx SINE Alu 1 343 0 675 94 0 0 chr10 30490480 30490576 -109826189 + (TTTCC)n Simple_repeat Simple_repeat 3 98 0 1389 173 0 16 chr10 30490576 30490819 -109825946 - AluJo SINE Alu -30 282 44 2302 109 3 0 chr10 30491285 30491596 -109825169 - AluSx SINE Alu 0 312 1 2617 53 0 0 chr10 30492039 30492343 -109824422 + AluY SINE Alu 1 304 -7 1883 154 13 3 chr10 30492456 30492761 -109824004 + AluJb SINE Alu 2 309 -3 2503 32 6 41 chr10 30493063 30493377 -109823388 + AluY SINE Alu 1 303 -8 1675 168 69 7 chr10 30493489 30493780 -109822985 - AluJo SINE Alu -3 309 1 349 329 7 0 chr10 30493833 30493970 -109822795 - LTR67 LTR ERVL -2 555 418 195 104 62 0 chr10 30494357 30494405 -109822360 + (TA)n Simple_repeat Simple_repeat 2 52 0 1901 163 0 10 chr10 30494724 30495024 -109821741 + AluSx SINE Alu 1 297 -15 656 300 44 21 chr10 30495340 30495680 -109821085 - L2 LINE L2 -104 3209 2862 2487 114 5 14 chr10 30495742 30496109 -109820656 + THE1B LTR MaLR 1 364 0 1962 142 3 19 chr10 30496330 30496647 -109820118 + AluJo SINE Alu 1 312 0 791 182 0 0 chr10 30496856 30496988 -109819777 - FLAM_A SINE Alu -1 132 1 192 200 0 44 chr10 30497004 30497049 -109819716 + MIR SINE MIR 117 159 -103 375 283 20 0 chr10 30497149 30497248 -109819517 + L2 LINE L2 3213 3313 0 335 336 55 23 chr10 30497302 30497522 -109819243 + L2 LINE L2 2608 2834 -480 2042 140 0 10 chr10 30497731 30498039 -109818726 - AluSx SINE Alu -3 309 5 990 260 48 51 chr10 30498331 30498704 -109818061 + MER110 LTR ERV1 105 476 -15 2444 78 0 31 chr10 30499081 30499402 -109817363 + AluY SINE Alu 1 311 0 541 133 0 0 chr10 30549420 30549495 -109767270 - AluS SINE Alu -237 76 2 1349 191 53 38 chr10 30550528 30550556 -109766209 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30550556 30550712 -109766053 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30550712 30551035 -109765730 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30551035 30551191 -109765574 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30551191 30551273 -109765492 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30551273 30551309 -109765456 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30551311 30551606 -109765159 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30551606 30551832 -109764933 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30551872 30551981 -109764784 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30551996 30552140 -109764625 - L1M4 LINE L1 -3536 2610 2448 6339 116 11 23 chr10 30552209 30553209 -109763556 - L1MA5A LINE L1 0 6297 5310 2178 110 7 0 chr10 30553209 30553501 -109763264 - AluSx SINE Alu -18 294 1 1687 116 56 8 chr10 30554049 30554328 -109762437 + AluSx SINE Alu 21 311 0 816 164 0 8 chr10 30554365 30554493 -109762272 - FLAM_C SINE Alu -16 127 1 605 214 24 0 chr10 30554625 30554751 -109762014 + MER5A DNA MER1_type 61 189 0 2125 181 65 117 chr10 30555196 30555278 -109761487 - LTR8A LTR ERV1 -3 724 639 2054 124 0 0 chr10 30555278 30555551 -109761214 + AluSx SINE Alu 1 273 -39 2125 181 65 117 chr10 30555551 30556231 -109760534 - LTR8A LTR ERV1 -88 639 1 244 237 85 0 chr10 30556802 30556861 -109759904 + MIR SINE MIR 84 147 -61 2246 102 3 3 chr10 30556873 30557167 -109759598 - AluSx SINE Alu -18 294 1 1877 178 0 0 chr10 30557192 30557490 -109759275 - AluJb SINE Alu -14 298 1 1523 79 0 88 chr10 30557819 30558070 -109758695 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30558799 30558822 -109757943 + AT_rich Low_complexity Low_complexity 1 23 0 1599 188 14 0 chr10 30558822 30559104 -109757661 - AluJo SINE Alu -26 286 1 2161 114 0 23 chr10 30559176 30559482 -109757283 + AluSg SINE Alu 1 299 -11 2476 72 0 0 chr10 30559823 30560115 -109756650 - AluSq SINE Alu -21 292 1 2393 87 7 0 chr10 30560354 30560654 -109756111 + AluSq SINE Alu 1 302 -11 265 342 40 7 chr10 30561146 30561298 -109755467 - L3 LINE CR1 -159 1418 1262 336 269 50 25 chr10 30561666 30561785 -109754980 - MIR3 SINE MIR -22 186 65 321 121 52 0 chr10 30561918 30561976 -109754789 + L1ME4a LINE L1 6060 6120 -1 1909 142 14 3 chr10 30561993 30562289 -109754476 + AluSx SINE Alu 11 309 -3 738 167 0 15 chr10 30562299 30562431 -109754334 + FLAM_C SINE Alu 1 130 -3 864 75 0 0 chr10 30562431 30562538 -109754227 + U6 snRNA snRNA 1 107 0 2450 77 0 0 chr10 30562949 30563260 -109753505 - AluY SINE Alu 0 311 1 668 228 28 11 chr10 30563274 30563454 -109753311 + L1 LINE L1 2230 2412 -3734 6257 156 17 56 chr10 30563460 30563774 -109752991 + L1 LINE L1 4019 4344 -1802 2446 81 0 7 chr10 30563774 30564082 -109752683 - AluY SINE Alu -4 307 2 6257 156 17 56 chr10 30564082 30565065 -109751700 + L1 LINE L1 4344 5265 -881 2402 85 0 0 chr10 30565266 30565560 -109751205 + AluSp SINE Alu 1 294 -19 181 340 183 13 chr10 30565716 30565869 -109750896 + L2 LINE L2 2578 2756 -558 226 189 176 14 chr10 30566084 30566158 -109750607 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30566200 30566369 -109750396 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30566369 30566669 -109750096 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30566669 30566837 -109749928 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30567192 30567522 -109749243 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30567678 30567703 -109749062 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30567764 30567787 -109748978 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30567810 30568118 -109748647 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30568386 30568467 -109748298 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30568493 30568765 -109748000 + AluJo SINE Alu 28 300 -12 2071 114 0 7 chr10 30568969 30569258 -109747507 + AluSx SINE Alu 3 289 -23 337 294 40 8 chr10 30569519 30569645 -109747120 - MIR SINE MIR -72 190 61 2164 115 0 7 chr10 30570797 30571093 -109745672 + AluSx SINE Alu 1 294 -18 1920 147 29 3 chr10 30571099 30571411 -109745354 + MER7A DNA MER2_type 1 318 -28 438 169 14 0 chr10 30571512 30571583 -109745182 + MER7A DNA MER2_type 263 334 -3 1053 236 91 15 chr10 30571910 30572308 -109744457 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30572305 30572372 -109744393 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30572564 30572610 -109744155 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30572610 30572676 -109744089 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30572676 30572761 -109744004 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 5327 163 29 67 chr10 30572762 30573268 -109743497 - L1MB1 LINE L1 -65 7522 6998 2477 82 0 0 chr10 30573268 30573574 -109743191 - AluY SINE Alu -5 306 1 5327 163 29 67 chr10 30573574 30573754 -109743011 - L1MB1 LINE L1 -589 6998 6813 264 30 0 0 chr10 30573754 30573787 -109742978 + (TG)n Simple_repeat Simple_repeat 2 34 0 5327 163 29 67 chr10 30573787 30574902 -109741863 - L1MB1 LINE L1 -774 6813 5810 2185 91 18 0 chr10 30574902 30575243 -109741522 - AluSg SINE Alu 0 346 1 5327 163 29 67 chr10 30575243 30575414 -109741351 - L1MB1 LINE L1 -1777 5810 5634 1918 269 45 49 chr10 30575418 30576412 -109740353 - L1MB1 LINE L1 -2972 4593 3596 2262 109 0 3 chr10 30576412 30576715 -109740050 + AluSx SINE Alu 1 302 -10 1918 269 45 49 chr10 30576715 30577036 -109739729 - L1MB1 LINE L1 -3969 3596 3275 2114 129 7 0 chr10 30577036 30577355 -109739410 + AluSx SINE Alu 1 321 0 1918 269 45 49 chr10 30577355 30578142 -109738623 - L1MB1 LINE L1 -4290 3275 2542 1839 207 70 27 chr10 30578143 30578583 -109738182 - LTR2B LTR ERV1 0 490 32 1455 227 91 71 chr10 30578587 30578687 -109738078 - L1M3d LINE L1 -4596 1295 1198 1905 144 18 4 chr10 30578687 30579013 -109737752 - AluSx SINE Alu 0 330 1 1455 227 91 71 chr10 30579013 30579121 -109737644 - L1M3d LINE L1 -4693 1198 1094 2018 151 0 10 chr10 30579121 30579420 -109737345 - AluJo SINE Alu -16 296 1 1455 227 91 71 chr10 30579420 30579817 -109736948 - L1M3d LINE L1 -4797 1094 676 1153 284 76 62 chr10 30579972 30580500 -109736265 - L1M3d LINE L1 -5235 656 351 2659 43 0 0 chr10 30580500 30580804 -109735961 - AluY SINE Alu -7 304 1 1153 284 76 62 chr10 30580804 30581153 -109735612 - L1M3d LINE L1 -5540 351 9 189 0 0 0 chr10 30581161 30581182 -109735583 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30581181 30581218 -109735547 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30581220 30581513 -109735252 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30581516 30581806 -109734959 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30581806 30582144 -109734621 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30582144 30582447 -109734318 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30582593 30582679 -109734086 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30582824 30583117 -109733648 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30583139 30583477 -109733288 - L1MC5 LINE L1 -60 7901 7564 2321 164 8 10 chr10 30583573 30583975 -109732790 + L1MB2 LINE L1 5764 6164 -7 450 175 217 0 chr10 30583982 30584102 -109732663 - L2 LINE L2 -609 2705 2560 649 313 32 4 chr10 30584212 30584458 -109732307 + ERVL LTR ERVL 4441 4693 -1071 1497 116 19 107 chr10 30584670 30584806 -109731959 - L1M2 LINE L1 -559 5741 5595 2482 60 0 3 chr10 30584806 30585106 -109731659 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30585106 30585411 -109731354 - AluSg SINE Alu -4 306 1 1497 116 19 107 chr10 30585411 30585518 -109731247 - L1M2 LINE L1 -704 5596 5481 2334 97 0 10 chr10 30585518 30585817 -109730948 + AluSx SINE Alu 2 297 -15 1497 116 19 107 chr10 30585817 30585848 -109730917 - L1M2 LINE L1 -819 5481 5491 1967 178 0 0 chr10 30585848 30586151 -109730614 - AluJo SINE Alu -9 303 1 1497 116 19 107 chr10 30586151 30586183 -109730582 - L1M2 LINE L1 -808 5492 5459 342 221 47 35 chr10 30586212 30586298 -109730467 + AluY SINE Alu 1 87 -221 1748 150 7 18 chr10 30586422 30586708 -109730057 + AluSx SINE Alu 21 303 -9 270 81 0 0 chr10 30586720 30586757 -109730008 + (CA)n Simple_repeat Simple_repeat 2 38 0 2503 162 13 49 chr10 30586757 30586917 -109729848 + L1MA6 LINE L1 5792 5956 -344 2158 74 0 45 chr10 30586917 30587227 -109729538 + AluY SINE Alu 1 296 -15 2503 162 13 49 chr10 30587227 30587373 -109729392 + L1MA6 LINE L1 5956 6106 -194 2399 124 14 8 chr10 30587373 30587735 -109729030 - THE1B LTR MaLR 0 364 1 2503 162 13 49 chr10 30587735 30587944 -109728821 + L1MA6 LINE L1 6106 6291 -9 865 118 22 7 chr10 30588651 30588786 -109727979 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30588903 30588939 -109727826 + AT_rich Low_complexity Low_complexity 1 36 0 1932 153 0 16 chr10 30590025 30590338 -109726427 - AluJb SINE Alu -2 310 3 1992 103 70 4 chr10 30590367 30590639 -109726126 + AluSg SINE Alu 1 290 -20 502 191 197 0 chr10 30590883 30591030 -109725735 + MIR SINE MIR 86 261 -1 484 254 7 36 chr10 30591861 30591999 -109724766 + MER94 DNA DNA 1 134 0 2230 91 0 17 chr10 30592757 30593053 -109723712 + AluSx SINE Alu 13 303 -9 1041 102 32 13 chr10 30593105 30593262 -109723503 + AluSp SINE Alu 1 160 -153 1441 88 6 0 chr10 30593387 30593569 -109723196 + AluSp SINE Alu 113 295 -18 437 301 56 50 chr10 30593578 30593982 -109722783 + L1ME4a LINE L1 5562 5964 -157 1516 97 21 13 chr10 30594173 30594411 -109722354 - LTR7 LTR ERV1 0 450 211 2364 86 0 7 chr10 30594418 30594720 -109722045 - AluY SINE Alu -11 300 1 2506 21 45 3 chr10 30595372 30595662 -109721103 + AluY SINE Alu 1 302 -9 288 158 0 0 chr10 30595735 30595792 -109720973 + T-rich Low_complexity Low_complexity 1 57 0 848 140 0 0 chr10 30595793 30595907 -109720858 - AluSq/x SINE Alu -198 114 1 1693 129 0 24 chr10 30595909 30596164 -109720601 - AluSx SINE Alu -16 296 48 2911 160 39 30 chr10 30596164 30596707 -109720058 + MLT2B3 LTR ERVL 1 548 -6 2094 140 0 7 chr10 30597216 30597516 -109719249 - AluSx SINE Alu -14 298 1 1590 139 64 6 chr10 30597557 30597871 -109718894 + L1PA16 LINE L1 5801 6163 0 1073 154 36 64 chr10 30597871 30598091 -109718674 + AluJo SINE Alu 82 295 -17 2359 101 0 0 chr10 30598093 30598400 -109718365 + AluY SINE Alu 1 307 -4 1747 199 3 3 chr10 30598483 30598785 -109717980 + AluJb SINE Alu 3 304 -8 738 129 11 140 chr10 30598875 30599053 -109717712 + MER20 DNA MER1_type 1 155 -64 609 144 0 0 chr10 30599055 30599152 -109717613 + FRAM SINE Alu 69 165 -11 1872 135 50 4 chr10 30599678 30599959 -109716806 - AluSx SINE Alu -18 294 1 1612 182 18 0 chr10 30600688 30601005 -109715760 - AluJo SINE Alu 0 312 13 500 294 31 0 chr10 30601012 30601175 -109715590 - L1ME LINE L1 -303 5818 5651 266 325 11 0 chr10 30601709 30601801 -109714964 + MER5A DNA MER1_type 25 127 -62 892 192 12 12 chr10 30601858 30602030 -109714735 - AluJo SINE Alu -16 296 125 1984 153 3 3 chr10 30602081 30602376 -109714389 - AluSx SINE Alu -17 295 1 260 248 124 66 chr10 30602704 30602825 -109713940 + MLT1I LTR MaLR 279 406 -3 1989 142 34 0 chr10 30603005 30603300 -109713465 + AluSx SINE Alu 1 305 -7 1997 140 3 3 chr10 30603821 30604114 -109712651 + AluSx SINE Alu 1 293 -19 315 0 0 0 chr10 30604119 30604154 -109712611 + (TG)n Simple_repeat Simple_repeat 2 36 0 911 219 45 0 chr10 30604195 30604373 -109712392 - AluJo SINE Alu -92 220 35 243 61 0 0 chr10 30604376 30604409 -109712356 + (TTG)n Simple_repeat Simple_repeat 1 33 0 428 264 25 0 chr10 30604626 30604747 -109712018 - MER113 DNA MER1_type? -64 457 334 2375 111 40 3 chr10 30604836 30605187 -109711578 - THE1B LTR MaLR 0 364 1 2297 113 8 23 chr10 30605187 30605541 -109711224 - Tigger2 DNA MER2_type -29 2689 2341 629 208 8 0 chr10 30605642 30605903 -109710862 + FRAM SINE Alu 56 417 -142 686 71 0 10 chr10 30605903 30606001 -109710764 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 2334 91 3 7 chr10 30606301 30606599 -109710166 - AluSp SINE Alu -12 301 5 1318 158 8 73 chr10 30606603 30606884 -109709881 - AluJb SINE Alu 0 303 40 2325 95 0 0 chr10 30607415 30607709 -109709056 - AluSx SINE Alu -14 298 5 244 269 39 13 chr10 30608035 30608113 -109708652 + MIR3 SINE MIR 78 157 -51 5209 68 43 1 chr10 30608197 30608890 -109707875 - LTR30 LTR ERV1 0 722 1 2390 83 0 10 chr10 30608954 30609256 -109707509 + AluSc SINE Alu 1 299 -10 1219 98 0 11 chr10 30609502 30609676 -109707089 - AluY SINE Alu -12 299 128 1541 213 174 8 chr10 30609795 30610273 -109706492 - L1M4c LINE L1 -2900 3948 3392 1183 180 19 161 chr10 30610297 30610397 -109706368 + MLT1A1 LTR MaLR 1 114 -251 2339 64 0 38 chr10 30610397 30610710 -109706055 - AluY SINE Alu -10 301 1 1183 180 19 161 chr10 30610710 30611031 -109705734 + MLT1A1 LTR MaLR 114 362 -3 2377 72 13 3 chr10 30611036 30611340 -109705425 + AluSp SINE Alu 1 307 -6 1966 211 105 49 chr10 30611349 30612247 -109704518 - L1M4c LINE L1 -4002 3027 1871 2261 101 3 3 chr10 30612671 30612968 -109703797 - AluSp SINE Alu -16 297 1 1651 157 17 20 chr10 30613669 30613968 -109702797 + AluSx SINE Alu 1 298 -14 2768 252 104 34 chr10 30614343 30614514 -109702251 - L2 LINE L2 -287 3026 2869 2264 98 7 3 chr10 30614514 30614821 -109701944 + AluSc SINE Alu 1 308 -1 2768 252 104 34 chr10 30614821 30615748 -109701017 - L2 LINE L2 -444 2869 1826 1895 152 7 3 chr10 30615802 30616092 -109700673 - AluSx SINE Alu -21 291 1 979 170 0 6 chr10 30616099 30616258 -109700507 - FRAM SINE Alu -25 151 1 1732 137 10 17 chr10 30617127 30617420 -109699345 + AluJo SINE Alu 1 291 -21 318 305 118 78 chr10 30617634 30618031 -109698734 - L1M4c LINE L1 -5878 971 559 237 108 0 0 chr10 30618382 30618489 -109698276 + (CGG)n Simple_repeat Simple_repeat 1 107 0 1160 100 18 118 chr10 30618682 30618794 -109697971 + LOR1a LTR ERV1 300 382 -115 2312 78 0 0 chr10 30618794 30619105 -109697660 + AluY SINE Alu 1 311 0 1160 100 18 118 chr10 30619105 30619211 -109697554 + LOR1a LTR ERV1 382 497 0 713 186 7 57 chr10 30619703 30619843 -109696922 + FLAM_A SINE Alu 1 133 0 2205 98 0 0 chr10 30619849 30620126 -109696639 + AluSg1 SINE Alu 1 277 -32 1236 51 17 11 chr10 30620127 30620304 -109696461 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 962 244 96 94 chr10 30620662 30621013 -109695752 + LTR16A LTR ERVL 18 372 -78 5532 83 4 24 chr10 30621013 30621178 -109695587 - L1MA2 LINE L1 -7 6297 6130 2415 51 0 41 chr10 30621178 30621493 -109695272 - AluY SINE Alu -9 302 1 5532 83 4 24 chr10 30621493 30622078 -109694687 - L1MA2 LINE L1 -174 6130 5562 962 244 96 94 chr10 30622078 30622152 -109694613 + LTR16A LTR ERVL 372 444 -6 224 205 0 0 chr10 30622765 30622804 -109693961 + polypurine Low_complexity Low_complexity 3 41 0 2298 122 0 0 chr10 30622834 30623146 -109693619 + AluSx SINE Alu 1 312 0 2261 74 7 17 chr10 30623212 30623510 -109693255 + AluY SINE Alu 1 295 -16 21 0 0 0 chr10 30623649 30623670 -109693095 + AT_rich Low_complexity Low_complexity 1 21 0 1877 150 0 10 chr10 30624200 30624494 -109692271 + AluJo SINE Alu 1 291 -21 2080 129 13 10 chr10 30624845 30625156 -109691609 + AluSx SINE Alu 1 312 0 410 226 0 12 chr10 30625301 30625385 -109691380 + MLT1F1 LTR MaLR 1 83 -484 1879 163 0 10 chr10 30625398 30625704 -109691061 + AluJb SINE Alu 3 305 -7 270 0 0 0 chr10 30626310 30626340 -109690425 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 557 199 24 12 chr10 30626607 30626773 -109689992 + GA-rich Low_complexity Low_complexity 2 169 0 1048 254 79 3 chr10 30626773 30627064 -109689701 - LTR16B LTR ERVL -151 313 1 209 0 97 0 chr10 30627386 30627417 -109689348 + A-rich Low_complexity Low_complexity 2 35 0 828 164 0 0 chr10 30627749 30627877 -109688888 - FLAM_C SINE Alu -4 139 12 258 283 0 0 chr10 30628634 30628687 -109688078 + AluS SINE Alu 5 57 -246 4106 184 68 15 chr10 30628834 30630084 -109686681 + L1MB5 LINE L1 4851 6166 -8 1762 169 108 19 chr10 30630120 30630180 -109686585 - MSTD LTR MaLR -2 394 341 2214 91 3 14 chr10 30630180 30630476 -109686289 + AluSg SINE Alu 1 293 -17 1762 169 108 19 chr10 30630476 30630777 -109685988 - MSTD LTR MaLR -55 341 1 340 313 40 73 chr10 30630778 30631053 -109685712 + L2 LINE L2 2158 2423 -891 491 257 151 18 chr10 30631053 30631271 -109685494 - MIR SINE MIR -12 250 4 392 342 89 0 chr10 30631271 30631472 -109685293 + L2 LINE L2 2423 2641 -673 28 0 0 0 chr10 30631491 30631519 -109685246 + AT_rich Low_complexity Low_complexity 1 28 0 1886 232 164 12 chr10 30631698 30632288 -109684477 + L2 LINE L2 615 1294 -2020 1792 209 8 16 chr10 30632290 30632653 -109684112 - MLT1A1 LTR MaLR -5 360 1 1240 242 60 56 chr10 30632695 30632921 -109683844 + L2 LINE L2 1332 1555 -1759 779 221 118 31 chr10 30632921 30632998 -109683767 + MER58C DNA MER1_type 4 73 -2347 2322 100 7 3 chr10 30632998 30633307 -109683458 - AluSg SINE Alu 0 310 1 779 221 118 31 chr10 30633307 30633424 -109683341 + MER58C DNA MER1_type 73 215 0 1240 242 60 56 chr10 30633424 30633644 -109683121 + L2 LINE L2 1555 1780 -1534 27 0 0 0 chr10 30633646 30633673 -109683092 + AT_rich Low_complexity Low_complexity 1 27 0 387 315 73 12 chr10 30633681 30633846 -109682919 + L2 LINE L2 3138 3312 -1 408 203 0 0 chr10 30634161 30634230 -109682535 + MER5A DNA MER1_type 5 73 -116 963 252 76 74 chr10 30635078 30635280 -109681485 + MLT1J LTR MaLR 22 222 -289 2632 45 0 0 chr10 30635280 30635589 -109681176 - AluY SINE Alu -2 309 1 963 252 76 74 chr10 30635589 30635834 -109680931 + MLT1J LTR MaLR 222 470 -41 2543 44 0 13 chr10 30635908 30636206 -109680559 + AluY SINE Alu 1 294 -17 437 30 0 30 chr10 30636249 30636316 -109680449 + L1PA15 LINE L1 6101 6165 0 21 57 0 19 chr10 30636385 30636406 -109680359 + AT_rich Low_complexity Low_complexity 1 21 -31 2405 67 0 3 chr10 30636406 30636705 -109680060 + AluY SINE Alu 1 298 -13 21 57 0 19 chr10 30636705 30636736 -109680029 + AT_rich Low_complexity Low_complexity 21 52 0 2207 99 10 0 chr10 30637361 30637653 -109679112 - AluSc SINE Alu -14 295 1 333 313 112 33 chr10 30637773 30637987 -109678778 + MIR SINE MIR 2 232 -30 206 222 14 83 chr10 30638322 30638394 -109678371 + MER5B DNA MER1_type 109 175 -3 271 314 73 36 chr10 30638415 30638552 -109678213 + L2 LINE L2 1102 1243 -2071 * 1072 260 116 23 chr10 30638542 30639031 -109677734 - L2 LINE L2 -148 3165 2616 463 249 11 115 chr10 30639399 30639618 -109677147 + MER20B DNA MER1_type 1 202 -17 455 332 56 12 chr10 30639639 30639889 -109676876 + L2 LINE L2 1887 2147 -1167 709 254 12 0 chr10 30639889 30640054 -109676711 + L1M4 LINE L1 1 167 -6375 289 172 46 9 chr10 30640055 30640208 -109676557 + AluSq SINE Alu 2 197 -106 1950 139 10 3 chr10 30640234 30640528 -109676237 + AluSx SINE Alu 2 297 -15 1962 113 13 23 chr10 30642327 30642627 -109674138 + AluSx SINE Alu 1 297 -15 186 154 128 26 chr10 30643979 30644018 -109672747 - L2 LINE L2 -2 3270 3228 2208 112 7 0 chr10 30644669 30644972 -109671793 + AluSx SINE Alu 1 305 -7 1113 197 143 65 chr10 30644976 30645255 -109671510 + AluJo SINE Alu 2 302 0 1913 148 37 3 chr10 30645929 30646227 -109670538 - AluSq SINE Alu -5 308 1 659 100 27 55 chr10 30647785 30647895 -109668870 - AluSg/x SINE Alu 0 309 203 189 308 15 31 chr10 30648002 30648067 -109668698 - MIR SINE MIR -70 192 129 768 324 172 16 chr10 30648124 30648646 -109668119 + L2 LINE L2 2508 3110 -203 226 275 78 56 chr10 30649244 30649386 -109667379 + L2 LINE L2 3150 3294 -19 304 233 27 14 chr10 30649484 30649557 -109667208 - MER5A DNA MER1_type -75 114 41 1160 184 93 48 chr10 30649589 30649899 -109666866 - MER33 DNA MER1_type 0 324 1 1706 149 29 7 chr10 30650271 30650546 -109666219 - AluSx SINE Alu -27 285 5 217 281 247 27 chr10 30650744 30650890 -109665875 + MIR SINE MIR 49 226 -36 2049 86 86 4 chr10 30651149 30651428 -109665337 + AluSx SINE Alu 1 302 -10 271 305 39 39 chr10 30651448 30651576 -109665189 + MER5B DNA MER1_type 2 129 -49 2009 108 42 0 chr10 30651577 30651865 -109664900 + AluSp SINE Alu 1 300 -13 2279 98 0 0 chr10 30653620 30653917 -109662848 + AluSq SINE Alu 1 297 -16 23 33 0 0 chr10 30654240 30654270 -109662495 + AT_rich Low_complexity Low_complexity 1 30 0 2310 99 0 10 chr10 30654277 30654591 -109662174 - AluSq SINE Alu -2 311 1 603 214 56 0 chr10 30655119 30655245 -109661520 + MER3 DNA MER1_type 1 133 -76 1722 191 0 25 chr10 30655250 30655564 -109661201 - AluJb SINE Alu -4 308 3 1897 128 7 20 chr10 30656250 30656548 -109660217 + AluSg SINE Alu 1 294 -16 306 317 147 5 chr10 30657881 30658105 -109658660 + MARNA DNA Mariner 185 440 -146 315 0 0 0 chr10 30658152 30658187 -109658578 + (TG)n Simple_repeat Simple_repeat 2 36 0 2038 108 47 17 chr10 30658187 30658483 -109658282 - AluSx SINE Alu -7 305 1 207 0 0 0 chr10 30659213 30659236 -109657529 + (T)n Simple_repeat Simple_repeat 1 23 0 204 206 0 0 chr10 30659257 30659291 -109657474 + MIR3 SINE MIR 148 181 -27 1697 172 66 30 chr10 30660054 30660239 -109656526 - MER2 DNA MER2_type 0 344 140 1897 148 7 7 chr10 30660239 30660536 -109656229 - AluSx SINE Alu -15 297 1 1697 172 66 30 chr10 30660536 30660682 -109656083 - MER2 DNA MER2_type -204 140 1 254 319 107 37 chr10 30660980 30661330 -109655435 + L2 LINE L2 2647 3070 -202 362 252 44 30 chr10 30661380 30661515 -109655250 + L2 LINE L2 2344 2480 -834 332 244 248 54 chr10 30661495 30661753 -109655012 + L2 LINE L2 2624 2931 -383 * 1198 151 25 29 chr10 30661755 30662000 -109654765 - MER31A LTR ERV1 -2 483 240 561 192 51 112 chr10 30662000 30662214 -109654551 + MLT1A2 LTR MaLR 1 201 -173 561 194 16 47 chr10 30662196 30662325 -109654440 + MSTD LTR MaLR 265 389 -7 597 160 0 0 chr10 30662325 30662419 -109654346 - MER31A LTR ERV1 -240 245 152 2775 194 58 25 chr10 30662420 30663474 -109653291 - L1M2 LINE L1 -628 5684 4595 1590 191 10 14 chr10 30663781 30664075 -109652690 + AluJb SINE Alu 1 293 -19 2202 121 0 0 chr10 30664160 30664457 -109652308 + AluY SINE Alu 1 297 -14 1045 187 87 4 chr10 30664623 30664864 -109651901 - MER93a LTR ERV1 -24 378 118 22 35 0 0 chr10 30664924 30664953 -109651812 + AT_rich Low_complexity Low_complexity 1 29 0 184 342 13 63 chr10 30665421 30665500 -109651265 - L2 LINE L2 -37 3235 3161 261 0 0 0 chr10 30665504 30665533 -109651232 + (TG)n Simple_repeat Simple_repeat 2 30 0 483 261 167 74 chr10 30665557 30665849 -109650916 - L2 LINE L2 -159 3154 2806 1117 216 119 41 chr10 30665849 30666261 -109650504 - LTR56 LTR ERV1 -1 444 1 483 261 167 74 chr10 30666261 30666401 -109650364 - L2 LINE L2 -507 2806 2680 1383 161 23 87 chr10 30666427 30666726 -109650039 + AluJb SINE Alu 1 280 -32 553 228 108 56 chr10 30666751 30667001 -109649764 - L2 LINE L2 -860 2454 2192 431 229 56 49 chr10 30667040 30667184 -109649581 - MER58B DNA MER1_type 0 341 197 606 244 87 87 chr10 30667229 30667540 -109649225 - L2 LINE L2 -1145 2169 1859 1628 160 11 22 chr10 30668016 30668291 -109648474 + MER1B DNA MER1_type 3 274 -65 2062 123 7 7 chr10 30668431 30668723 -109648042 - AluSx SINE Alu -20 292 1 961 110 0 0 chr10 30669445 30669572 -109647193 - AluSq/x SINE Alu -185 127 1 1965 106 3 70 chr10 30669937 30670266 -109646499 - AluSc SINE Alu -2 307 1 1466 157 96 4 chr10 30670362 30670647 -109646118 + AluJb SINE Alu 1 309 0 2527 200 98 35 chr10 30671037 30671722 -109645043 - L1MD2 LINE L1 -20 6339 5612 1142 120 0 18 chr10 30671738 30671905 -109644860 - FRAM SINE Alu -13 163 1 182 257 158 69 chr10 30672516 30672617 -109644148 + L2 LINE L2 3200 3309 -4 958 229 66 83 chr10 30672902 30673506 -109643259 - HAL1b LINE L1 -754 594 1 1660 159 61 14 chr10 30674110 30674405 -109642360 - AluJo SINE Alu -3 309 1 1913 142 0 16 chr10 30674742 30674915 -109641850 - AluSg SINE Alu -6 304 137 1424 58 16 0 chr10 30674915 30675104 -109641661 - L1PA5 LINE L1 -1 6153 5962 1913 142 0 16 chr10 30675104 30675239 -109641526 - AluSg SINE Alu -173 137 1 249 268 125 48 chr10 30676935 30677103 -109639662 - L2 LINE L2 -1 3312 3132 1927 99 99 3 chr10 30677314 30677597 -109639168 - AluSx SINE Alu -2 310 1 22 35 0 0 chr10 30678265 30678294 -109638471 + AT_rich Low_complexity Low_complexity 1 29 0 2266 101 0 0 chr10 30678426 30678722 -109638043 + AluSg SINE Alu 3 298 -12 314 186 105 35 chr10 30678729 30678815 -109637950 - L2 LINE L2 -208 3105 3014 2124 120 3 0 chr10 30678897 30679196 -109637569 + AluSq SINE Alu 1 300 -13 261 155 2 56 chr10 30679516 30679576 -109637189 - FLAM SINE Alu -12 121 72 885 204 40 22 chr10 30679611 30679836 -109636929 - L1MB8 LINE L1 -125 6053 5825 1914 202 65 61 chr10 30680072 30680518 -109636247 - L1MB8 LINE L1 -9 6169 5726 1820 125 50 7 chr10 30680518 30680815 -109635950 - AluSg SINE Alu 0 310 1 1964 139 0 3 chr10 30680823 30681111 -109635654 - AluSx SINE Alu -25 287 1 1914 202 65 61 chr10 30681111 30681210 -109635555 - L1MB8 LINE L1 -458 5720 5613 192 40 0 0 chr10 30681308 30681333 -109635432 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1321 119 9 22 chr10 30681467 30681694 -109635071 - L1PA16 LINE L1 -7 6159 5936 1503 191 61 16 chr10 30681742 30682159 -109634606 - L1MB8 LINE L1 -570 5608 5172 1838 161 56 3 chr10 30682214 30682536 -109634229 + MER7A DNA MER2_type 10 346 0 236 242 32 16 chr10 30682829 30682891 -109633874 - MER20B DNA MER1_type -352 431 369 268 188 333 21 chr10 30682956 30683052 -109633713 - MER20B DNA MER1_type -435 348 223 936 205 151 0 chr10 30683155 30683414 -109633351 - MER33 DNA MER1_type -25 299 2 185 319 0 42 chr10 30684168 30684240 -109632525 + MER5A DNA MER1_type 4 72 -117 1595 179 21 14 chr10 30684244 30684543 -109632222 + AluSx SINE Alu 1 301 0 2268 203 49 79 chr10 30687202 30687621 -109629144 - MER68 LTR ERV1 -8 554 155 714 178 31 0 chr10 30687621 30687750 -109629015 - FLAM_A SINE Alu 0 133 1 2268 203 49 79 chr10 30687750 30687901 -109628864 - MER68 LTR ERV1 -407 155 1 1873 88 4 31 chr10 30687910 30688197 -109628568 - AluSx SINE Alu 0 312 33 186 291 128 23 chr10 30688644 30688730 -109628035 + L2 LINE L2 2229 2323 -991 192 409 54 21 chr10 30688803 30688989 -109627776 + L2 LINE L2 2552 2743 -571 194 273 91 0 chr10 30690241 30690296 -109626469 - L2 LINE L2 -17 3296 3237 237 381 126 14 chr10 30690411 30690944 -109625821 - L2 LINE L2 -5 3267 2668 1819 114 96 0 chr10 30691177 30691449 -109625316 + AluSx SINE Alu 1 298 -14 325 245 293 0 chr10 30691456 30691668 -109625097 - LTR50 LTR ERVL -43 752 479 409 202 73 18 chr10 30691740 30691849 -109624916 - LTR50 LTR ERVL -666 129 15 186 133 0 0 chr10 30691896 30691926 -109624839 + (T)n Simple_repeat Simple_repeat 1 30 0 1624 158 9 53 chr10 30692765 30693087 -109623678 + AluJo SINE Alu 5 312 0 666 183 0 0 chr10 30693348 30693463 -109623302 + FLAM_A SINE Alu 1 115 -18 1198 169 164 50 chr10 30693500 30693884 -109622881 - Charlie1b DNA MER1_type -94 429 2 230 327 35 26 chr10 30694841 30694954 -109621811 + MIR SINE MIR 34 147 -61 703 109 138 52 chr10 30695104 30695278 -109621487 - L1MA5A LINE L1 -2 6295 6107 1870 162 30 0 chr10 30696406 30696703 -109620062 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr10 30697051 30697086 -109619679 + AT_rich Low_complexity Low_complexity 1 35 0 1491 153 99 11 chr10 30697946 30698228 -109618537 + AluJo SINE Alu 3 309 -3 2118 127 3 3 chr10 30698709 30699009 -109617756 + AluSc SINE Alu 1 300 -9 314 264 81 34 chr10 30699124 30699272 -109617493 - L1ME4a LINE L1 -123 5998 5844 248 286 48 24 chr10 30699300 30699384 -109617381 - L1ME4a LINE L1 -2015 5793 5708 1717 99 144 4 chr10 30699853 30700116 -109616649 + AluSx SINE Alu 1 300 -12 679 197 40 26 chr10 30700265 30700417 -109616348 - MER20B DNA MER1_type -1 218 65 23 54 0 0 chr10 30701738 30701775 -109614990 + AT_rich Low_complexity Low_complexity 1 37 0 605 200 0 0 chr10 30704330 30704435 -109612330 - FLAM_C SINE Alu -38 105 1 320 250 143 0 chr10 30705697 30705781 -109610984 + L2 LINE L2 3207 3302 -11 450 254 113 14 chr10 30707071 30707284 -109609481 + L1M4 LINE L1 5127 5360 -786 3678 198 72 18 chr10 30707291 30708436 -109608329 + L1MB4 LINE L1 4970 6179 -1 1252 123 128 0 chr10 30709508 30709711 -109607054 + MER30 DNA MER1_type 2 230 0 2331 72 0 7 chr10 30710018 30710310 -109606455 + AluY SINE Alu 1 290 -21 474 65 0 0 chr10 30710310 30710372 -109606393 + (TA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr10 30710446 30710489 -109606276 + AT_rich Low_complexity Low_complexity 1 43 0 1783 146 46 4 chr10 30710817 30711098 -109605667 + AluSx SINE Alu 1 293 -19 201 333 0 0 chr10 30711598 30711646 -109605119 - L3 LINE CR1 -15 1562 1515 190 296 148 0 chr10 30711658 30711746 -109605019 - MER5A DNA MER1_type -21 168 68 * 217 250 143 93 chr10 30711663 30711803 -109604962 + MER5B DNA MER1_type 29 175 -3 182 265 103 15 chr10 30711835 30711903 -109604862 - MIR SINE MIR -119 143 70 1529 166 63 11 chr10 30712415 30712699 -109604066 - AluJb SINE Alu -9 303 5 922 271 80 23 chr10 30713057 30713545 -109603220 - L1ME LINE L1 -419 5743 5230 185 275 87 14 chr10 30714296 30714365 -109602400 + MIR SINE MIR 72 145 -117 1755 136 0 4 chr10 30715490 30715748 -109601017 + AluSx SINE Alu 44 300 -12 1311 170 70 4 chr10 30715974 30716203 -109600562 + AluJb SINE Alu 1 244 -68 2221 97 27 7 chr10 30716294 30716592 -109600173 - AluSq SINE Alu -9 304 1 578 161 145 16 chr10 30719369 30719493 -109597272 + AluJo SINE Alu 2 141 -171 1436 153 13 4 chr10 30719493 30719729 -109597036 + AluSx SINE Alu 41 278 -34 582 222 90 21 chr10 30719741 30719885 -109596880 + AluJo SINE Alu 140 293 -19 2426 28 43 0 chr10 30720478 30720760 -109596005 - AluY SINE Alu -17 294 1 1463 199 24 17 chr10 30721680 30721976 -109594789 - MARNA DNA Mariner -39 547 250 2046 138 0 16 chr10 30723163 30723467 -109593298 + AluSx SINE Alu 1 299 -13 2317 105 0 3 chr10 30725364 30725669 -109591096 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr10 30725758 30725787 -109590978 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30725812 30725841 -109590924 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30726322 30726349 -109590416 + AT_rich Low_complexity Low_complexity 1 27 0 192 77 0 0 chr10 30727531 30727557 -109589208 + (TTC)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr10 30727583 30727603 -109589162 + (T)n Simple_repeat Simple_repeat 1 20 0 2431 78 3 0 chr10 30728248 30728544 -109588221 - AluSp SINE Alu -16 297 1 195 100 0 0 chr10 30728782 30728812 -109587953 + (C)n Simple_repeat Simple_repeat 1 30 0 304 298 233 20 chr10 30729629 30730136 -109586629 + L2 LINE L2 2184 2798 -516 523 167 115 0 chr10 30730280 30730376 -109586389 + FLAM_C SINE Alu 2 108 -35 220 300 44 11 chr10 30731293 30731383 -109585382 + L2 LINE L2 3208 3300 -13 1020 141 107 5 chr10 30731592 30731798 -109584967 + L1MA5A LINE L1 5382 5608 -689 1032 160 0 0 chr10 30731799 30731955 -109584810 + AluSg/x SINE Alu 135 290 -20 2176 138 126 20 chr10 30731961 30732412 -109584353 + L1MA5A LINE L1 5600 6098 -199 1996 94 11 120 chr10 30732417 30732767 -109583998 - AluSx SINE Alu 0 312 1 647 282 40 20 chr10 30733840 30734088 -109582677 - L1MC4 LINE L1 0 8042 7790 2192 119 7 0 chr10 30734088 30734383 -109582382 + AluSx SINE Alu 1 297 -15 458 263 57 99 chr10 30735767 30735902 -109580863 + L2 LINE L2 2945 3084 -229 2347 110 0 0 chr10 30735902 30736210 -109580555 - AluSx SINE Alu -4 308 1 458 263 57 99 chr10 30736210 30736427 -109580338 + L2 LINE L2 3084 3282 -31 1398 180 94 8 chr10 30736427 30736694 -109580071 + AluJo SINE Alu 2 291 -21 458 263 57 99 chr10 30736694 30736724 -109580041 + L2 LINE L2 3282 3312 -1 1820 149 11 4 chr10 30737356 30737664 -109579101 - AluJo SINE Alu 0 310 1 1284 126 23 96 chr10 30738081 30738342 -109578423 + AluJo SINE Alu 71 312 0 1629 193 20 13 chr10 30738482 30738782 -109577983 - AluJb SINE Alu -10 302 1 225 333 11 0 chr10 30738800 30738890 -109577875 + MIR SINE MIR 170 260 -2 246 128 0 0 chr10 30739353 30739392 -109577373 + (TG)n Simple_repeat Simple_repeat 2 40 0 2323 103 3 0 chr10 30739445 30739757 -109577008 + AluSp SINE Alu 1 313 0 2653 127 16 35 chr10 30739826 30740260 -109576505 - MSTB LTR MaLR 0 426 1 1915 138 32 0 chr10 30740907 30741189 -109575576 - AluSx SINE Alu -21 291 1 1249 243 63 69 chr10 30741189 30741556 -109575209 - L2 LINE L2 -3 3310 2942 1688 151 35 28 chr10 30741556 30741841 -109574924 + AluJo SINE Alu 6 292 -20 1249 243 63 69 chr10 30741841 30742372 -109574393 - L2 LINE L2 -371 2942 2400 2186 135 3 0 chr10 30742617 30742928 -109573837 + AluSx SINE Alu 1 312 0 276 243 29 107 chr10 30743381 30743485 -109573280 - MER94 DNA DNA -1 133 41 2372 99 3 0 chr10 30743485 30743787 -109572978 + AluSx SINE Alu 5 307 -5 276 243 29 107 chr10 30743787 30743822 -109572943 - MER94 DNA DNA -93 41 5 21 0 0 0 chr10 30744346 30744367 -109572398 + AT_rich Low_complexity Low_complexity 1 21 0 1829 148 24 3 chr10 30744367 30744658 -109572107 + AluJo SINE Alu 1 297 -15 210 171 0 0 chr10 30744736 30744771 -109571994 + (TA)n Simple_repeat Simple_repeat 2 36 0 457 248 55 108 chr10 30744814 30745349 -109571416 - L1MC4a LINE L1 -449 5672 5441 3962 161 20 56 chr10 30745550 30745600 -109571165 - L1MB1 LINE L1 -1 6167 6117 2311 99 3 3 chr10 30745600 30745903 -109570862 - AluSq SINE Alu -10 303 1 3962 161 20 56 chr10 30745903 30746212 -109570553 - L1MB1 LINE L1 -51 6117 5798 1997 147 7 0 chr10 30746212 30746511 -109570254 - AluSx SINE Alu -11 301 1 3962 161 20 56 chr10 30746511 30746956 -109569809 - L1MB1 LINE L1 -370 5798 5391 1300 181 50 32 chr10 30746956 30747233 -109569532 + MSTB1 LTR MaLR 1 282 -150 349 284 43 43 chr10 30747270 30747432 -109569333 + MIR SINE MIR 50 211 -51 2148 108 0 33 chr10 30747714 30748020 -109568745 - AluSx SINE Alu -12 300 5 2308 114 10 0 chr10 30748476 30748782 -109567983 + AluSq SINE Alu 1 309 -4 1592 165 71 8 chr10 30749097 30749364 -109567401 + AluJb SINE Alu 1 284 -28 1816 161 0 20 chr10 30750360 30750659 -109566106 + AluJb SINE Alu 1 293 -19 2127 106 17 7 chr10 30750730 30751022 -109565743 - AluSx SINE Alu -16 296 2 1349 191 53 38 chr10 30752055 30752083 -109564682 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30752083 30752239 -109564526 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30752239 30752562 -109564203 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30752562 30752718 -109564047 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30752718 30752800 -109563965 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30752800 30752836 -109563929 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30752838 30753133 -109563632 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30753133 30753359 -109563406 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30753399 30753508 -109563257 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30753523 30753667 -109563098 - L1M4 LINE L1 -3536 2610 2448 6722 134 13 36 chr10 30753736 30754737 -109562028 - L1MA5A LINE L1 0 6297 5367 2046 130 7 0 chr10 30754737 30755029 -109561736 - AluSx SINE Alu -18 294 1 6722 134 13 36 chr10 30755029 30756056 -109560709 - L1MA5A LINE L1 -930 5367 4318 2480 71 0 0 chr10 30756056 30756366 -109560399 + AluY SINE Alu 2 311 0 2022 116 3 27 chr10 30756386 30756679 -109560086 + AluSx SINE Alu 9 294 -18 2270 105 0 0 chr10 30756679 30756984 -109559781 + AluY SINE Alu 1 305 -6 306 239 15 0 chr10 30756987 30757054 -109559711 - MER106A DNA MER1_type -168 68 1 647 265 106 50 chr10 30757064 30757404 -109559361 + L2 LINE L2 2915 3279 -34 2360 102 0 10 chr10 30757404 30757709 -109559056 - AluSp SINE Alu -11 302 1 647 265 106 50 chr10 30757709 30757746 -109559019 + L2 LINE L2 3279 3313 0 2287 103 7 0 chr10 30757885 30758185 -109558580 + AluSq SINE Alu 1 302 -11 2290 88 7 3 chr10 30759598 30759893 -109556872 - AluSx SINE Alu -14 298 3 23 33 0 0 chr10 30759904 30759934 -109556831 + AT_rich Low_complexity Low_complexity 1 30 0 1662 175 3 34 chr10 30759934 30760231 -109556534 - AluJo SINE Alu -24 288 1 2226 93 0 10 chr10 30760503 30760792 -109555973 + AluSx SINE Alu 13 298 -14 1752 77 3 181 chr10 30761347 30761480 -109555285 + AluSx SINE Alu 1 156 -157 4750 42 4 14 chr10 30761480 30762033 -109554732 + SVA Other Other 835 1381 -5 1752 77 3 181 chr10 30762033 30762275 -109554490 + AluSx SINE Alu 156 313 0 228 35 0 0 chr10 30762379 30762408 -109554357 + (TG)n Simple_repeat Simple_repeat 2 30 0 896 159 0 0 chr10 30762715 30762847 -109553918 + AluJo/FLAM SINE Alu 2 133 -169 2083 110 4 0 chr10 30762847 30763128 -109553637 + AluSp SINE Alu 21 302 -11 2443 80 0 0 chr10 30763472 30763783 -109552982 + AluSq SINE Alu 1 311 -2 371 85 34 0 chr10 30763787 30763846 -109552919 + A-rich Low_complexity Low_complexity 4 64 0 2080 112 3 7 chr10 30763858 30764163 -109552602 + AluSx SINE Alu 3 306 -6 237 292 75 74 chr10 30764201 30764457 -109552308 + MIR3 SINE MIR 4 262 0 385 174 14 0 chr10 30764629 30764698 -109552067 + MER5A DNA MER1_type 1 70 -119 2110 128 3 0 chr10 30764745 30765050 -109551715 - AluSx SINE Alu -5 307 2 2342 81 0 0 chr10 30765052 30765350 -109551415 - AluSx SINE Alu -14 298 1 1566 119 56 8 chr10 30765898 30766177 -109550588 + AluSx SINE Alu 21 311 0 810 172 0 8 chr10 30766202 30766336 -109550429 - AluJo SINE Alu -174 138 6 659 214 24 0 chr10 30766474 30766600 -109550165 + MER5A DNA MER1_type 61 189 0 227 340 80 43 chr10 30766715 30766877 -109549888 - MIR3 SINE MIR -23 185 18 2127 181 65 117 chr10 30767045 30767127 -109549638 - LTR8A LTR ERV1 -3 724 639 1946 121 0 0 chr10 30767127 30767400 -109549365 + AluSx SINE Alu 1 273 -39 2127 181 65 117 chr10 30767400 30768080 -109548685 - LTR8A LTR ERV1 -88 639 1 268 237 85 0 chr10 30768651 30768710 -109548055 + MIR SINE MIR 84 147 -61 2118 102 3 3 chr10 30768722 30769016 -109547749 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 30769018 30769041 -109547724 + AT_rich Low_complexity Low_complexity 1 23 0 1773 174 0 0 chr10 30769041 30769339 -109547426 - AluJb SINE Alu -14 298 1 1396 88 0 88 chr10 30769668 30769919 -109546846 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30770647 30770670 -109546095 + AT_rich Low_complexity Low_complexity 1 23 0 1491 188 14 0 chr10 30770670 30770952 -109545813 - AluJo SINE Alu -26 286 1 2051 111 0 23 chr10 30771024 30771330 -109545435 + AluSg SINE Alu 1 299 -11 2342 72 0 0 chr10 30771671 30771963 -109544802 - AluSq SINE Alu -21 292 1 2304 90 6 0 chr10 30772202 30772513 -109544252 + AluSq SINE Alu 1 313 0 336 338 46 7 chr10 30773001 30773152 -109543613 - L3 LINE CR1 -159 1418 1262 383 257 42 69 chr10 30773520 30773664 -109543101 - MIR3 SINE MIR -22 186 47 315 121 52 0 chr10 30773772 30773830 -109542935 + L1ME4a LINE L1 6060 6120 -1 1796 142 14 3 chr10 30773847 30774143 -109542622 + AluSx SINE Alu 11 309 -3 753 165 0 15 chr10 30774153 30774286 -109542479 + FLAM_C SINE Alu 1 131 -2 864 75 0 0 chr10 30774286 30774393 -109542372 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30775196 30775220 -109541545 + GC_rich Low_complexity Low_complexity 1 24 0 200 351 18 0 chr10 30776729 30776786 -109539979 - MIR SINE MIR -113 149 92 1745 155 18 0 chr10 30776805 30777117 -109539648 + AluSx SINE Alu 3 319 0 1176 171 9 0 chr10 30777120 30777336 -109539429 + AluJb SINE Alu 84 301 -11 1687 149 0 0 chr10 30777401 30777663 -109539102 - AluSx SINE Alu -40 272 11 1994 125 24 0 chr10 30778200 30778489 -109538276 - AluSx SINE Alu -16 296 1 234 100 0 0 chr10 30778518 30778548 -109538217 + U2 snRNA snRNA 1 30 -158 817 182 14 0 chr10 30778566 30778714 -109538051 - FRAM SINE Alu -17 159 10 600 148 0 0 chr10 30778720 30778808 -109537957 - AluJ/FLAM SINE Alu -223 89 2 207 0 0 0 chr10 30779409 30779432 -109537333 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1165 199 96 4 chr10 30779839 30780100 -109536665 + AluJo SINE Alu 15 299 -13 950 119 6 25 chr10 30780208 30780367 -109536398 + AluJo SINE Alu 7 162 -150 2238 63 7 7 chr10 30781997 30782300 -109534465 + AluSg SINE Alu 3 305 -5 180 125 0 0 chr10 30783811 30783843 -109532922 + (CGGGG)n Simple_repeat Simple_repeat 3 34 0 24 32 0 0 chr10 30784231 30784262 -109532503 + GC_rich Low_complexity Low_complexity 1 31 0 251 341 0 0 chr10 30784897 30785064 -109531701 + (TG)n Simple_repeat Simple_repeat 2 168 0 2216 87 10 0 chr10 30790078 30790367 -109526398 + AluSg SINE Alu 1 292 -18 349 167 15 0 chr10 30790669 30790735 -109526030 - AluSg/x SINE Alu -26 274 208 1422 115 5 5 chr10 30790786 30790994 -109525771 - AluSq SINE Alu -105 208 1 280 259 36 98 chr10 30792364 30792476 -109524289 + MIR SINE MIR 79 183 -79 249 33 0 0 chr10 30793892 30793922 -109522843 + (TG)n Simple_repeat Simple_repeat 1 30 0 192 229 0 0 chr10 30794391 30794426 -109522339 + L2 LINE L2 3149 3183 -89 2144 102 3 0 chr10 30795185 30795480 -109521285 - AluSp SINE Alu -4 309 14 1286 155 68 8 chr10 30795557 30795808 -109520957 - AluJo SINE Alu -46 266 1 473 194 0 11 chr10 30795822 30795915 -109520850 - FLAM_C SINE Alu -18 125 34 27 62 0 0 chr10 30796037 30796085 -109520680 + AT_rich Low_complexity Low_complexity 1 48 0 1179 228 3 14 chr10 30796154 30796443 -109520322 - L1MA4 LINE L1 -11 6289 6004 1741 166 0 13 chr10 30797375 30797677 -109519088 - AluJb SINE Alu -14 298 1 1103 141 131 5 chr10 30797711 30797910 -109518855 + MSTA LTR MaLR 1 224 -204 240 163 0 0 chr10 30797914 30797957 -109518808 + C-rich Low_complexity Low_complexity 4 46 0 609 133 33 20 chr10 30797976 30798126 -109518639 + CT-rich Low_complexity Low_complexity 3 154 0 957 158 133 20 chr10 30798143 30798346 -109518419 + MSTA LTR MaLR 203 428 0 443 217 157 0 chr10 30798370 30798485 -109518280 + MIR SINE MIR 27 159 -103 958 142 6 24 chr10 30798490 30798659 -109518106 - FRAM SINE Alu 0 40 1 314 127 18 0 chr10 30798683 30798738 -109518027 + MIR SINE MIR 169 224 -38 2355 79 7 0 chr10 30798885 30799188 -109517577 + AluSx SINE Alu 1 305 -7 1716 161 0 3 chr10 30799649 30799935 -109516830 + AluJb SINE Alu 1 285 -27 2255 111 0 0 chr10 30800029 30800336 -109516429 + AluSx SINE Alu 1 307 -5 1830 149 13 20 chr10 30800430 30800732 -109516033 + AluJo SINE Alu 1 300 -12 2043 132 3 0 chr10 30801170 30801474 -109515291 - AluSx SINE Alu -3 309 5 1055 128 13 0 chr10 30801511 30801667 -109515098 - AluJb SINE Alu -25 287 130 21 36 0 0 chr10 30801913 30801941 -109514824 + AT_rich Low_complexity Low_complexity 1 28 0 1800 157 3 10 chr10 30802506 30802811 -109513954 + AluJo SINE Alu 9 311 -1 660 176 7 29 chr10 30802854 30802990 -109513775 - AluJb SINE Alu -178 134 2 2105 110 7 3 chr10 30803327 30803635 -109513130 - AluSp SINE Alu -4 309 1 2117 107 7 0 chr10 30803832 30804121 -109512644 - AluSx SINE Alu -18 294 4 1825 146 3 19 chr10 30805116 30805424 -109511341 - AluJo SINE Alu -9 303 1 926 127 0 0 chr10 30805485 30805619 -109511146 - AluSg/x SINE Alu -45 267 134 2080 121 7 0 chr10 30805619 30805916 -109510849 - AluSx SINE Alu -13 299 1 188 286 14 29 chr10 30806073 30806143 -109510622 + L3 LINE CR1 1404 1472 -105 1989 64 0 0 chr10 30806278 30806527 -109510238 - AluY SINE Alu -6 305 57 256 360 0 0 chr10 30806598 30806673 -109510092 + MER5C DNA MER1_type 9 83 -241 488 138 0 0 chr10 30806679 30806759 -109510006 - MADE1 DNA Mariner 0 80 1 1891 117 60 0 chr10 30806762 30807044 -109509721 - AluSx SINE Alu -13 299 1 386 82 0 0 chr10 30807044 30807093 -109509672 - MSTB LTR MaLR -372 54 6 1592 170 7 24 chr10 30807906 30808200 -109508565 - AluJo SINE Alu -18 294 6 2097 124 0 13 chr10 30808282 30808597 -109508168 - AluSx SINE Alu -1 311 1 2212 92 7 0 chr10 30808873 30809166 -109507599 - AluSc SINE Alu -14 295 1 1712 179 0 19 chr10 30809491 30809803 -109506962 - AluJo SINE Alu -6 306 1 1977 128 3 0 chr10 30809906 30810204 -109506561 + AluSq SINE Alu 1 299 -14 1646 171 0 7 chr10 30810383 30810682 -109506083 + AluJb SINE Alu 14 310 -2 279 343 97 6 chr10 30811396 30811571 -109505194 - MIR3 SINE MIR -6 202 12 * 908 223 66 0 chr10 30811544 30811741 -109505024 + MIR SINE MIR 53 262 0 2137 90 0 10 chr10 30812117 30812416 -109504349 - AluSx SINE Alu -16 296 1 944 180 0 27 chr10 30812615 30812798 -109503967 - FRAM SINE Alu -3 173 1 719 174 0 36 chr10 30812804 30812981 -109503784 - FLAM_C SINE Alu 0 172 1 2208 101 0 0 chr10 30813193 30813489 -109503276 - AluSx SINE Alu -16 296 1 33 56 0 0 chr10 30813489 30813543 -109503222 + AT_rich Low_complexity Low_complexity 1 54 0 1965 113 0 4 chr10 30813557 30813823 -109502942 - AluSg SINE Alu -45 265 1 39 0 0 20 chr10 30813823 30813859 -109502906 + AT_rich Low_complexity Low_complexity 1 37 -12 1930 155 0 7 chr10 30813859 30814150 -109502615 - AluJo SINE Alu -23 289 1 39 0 0 20 chr10 30814150 30814163 -109502602 + AT_rich Low_complexity Low_complexity 37 49 0 216 256 39 13 chr10 30814367 30814445 -109502320 + (TTGGGG)n Simple_repeat Simple_repeat 1 80 0 2447 71 7 7 chr10 30814745 30815054 -109501711 + AluSx SINE Alu 1 309 -3 183 333 0 0 chr10 30815065 30815116 -109501649 + L2 LINE L2 3210 3260 -12 207 0 0 0 chr10 30816210 30816233 -109500532 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2013 121 25 0 chr10 30816233 30816514 -109500251 - AluSq SINE Alu -25 288 1 316 297 74 7 chr10 30816642 30816790 -109499975 - MIR3 SINE MIR -49 159 2 2204 100 0 0 chr10 30817862 30818141 -109498624 + AluSx SINE Alu 27 305 -7 402 177 13 0 chr10 30818217 30818296 -109498469 - AluJo SINE Alu -3 309 230 1021 185 45 6 chr10 30818297 30818475 -109498290 - AluJo SINE Alu -127 185 1 242 231 21 77 chr10 30818558 30818701 -109498064 - L1ME4a LINE L1 -21 6100 5966 245 97 0 0 chr10 30818751 30818782 -109497983 + MLT1A1 LTR MaLR 1 31 -334 678 174 0 72 chr10 30818782 30818920 -109497845 - FLAM_A SINE Alu -5 128 1 720 162 0 0 chr10 30818920 30819031 -109497734 - AluJo/FLAM SINE Alu -188 124 14 1775 173 21 27 chr10 30819039 30819374 -109497391 + MLT1A1 LTR MaLR 33 365 0 1739 172 3 20 chr10 30819384 30819686 -109497079 - AluJo SINE Alu -15 297 1 1117 116 0 0 chr10 30819913 30820059 -109496706 + AluSg SINE Alu 1 146 -164 1340 144 19 5 chr10 30820468 30820683 -109496082 - AluJb SINE Alu -8 304 87 1542 196 0 7 chr10 30822260 30822530 -109494235 - AluJb SINE Alu -20 292 25 1645 198 96 8 chr10 30823072 30823436 -109493329 + MSTD LTR MaLR 1 396 0 825 152 0 41 chr10 30823509 30823654 -109493111 - FLAM_C SINE Alu 0 143 5 225 91 45 45 chr10 30823968 30824012 -109492753 + MIR SINE MIR 111 154 -108 377 312 59 43 chr10 30824092 30824345 -109492420 + L2 LINE L2 2941 3197 -75 969 200 21 109 chr10 30824345 30824359 -109492406 - AluJo SINE Alu -1 301 287 927 109 0 0 chr10 30824359 30824497 -109492268 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 969 200 21 109 chr10 30824497 30824812 -109491953 - AluJo SINE Alu -15 287 1 269 26 0 26 chr10 30824812 30824851 -109491914 + (TTTTA)n Simple_repeat Simple_repeat 5 42 0 2068 121 0 4 chr10 30824851 30825132 -109491633 - AluSx SINE Alu -32 280 1 1743 202 0 0 chr10 30825449 30825741 -109491024 + AluJb SINE Alu 6 297 -15 183 42 0 0 chr10 30825769 30825793 -109490972 + (TTG)n Simple_repeat Simple_repeat 1 24 0 524 273 82 6 chr10 30826293 30826476 -109490289 + MIR SINE MIR 15 211 -51 1347 121 9 78 chr10 30826509 30826705 -109490060 - AluJo SINE Alu -11 301 122 1969 105 0 14 chr10 30826705 30826982 -109489783 + AluSx SINE Alu 37 309 -3 1347 121 9 78 chr10 30826982 30827016 -109489749 - AluJo SINE Alu -190 122 87 261 264 28 0 chr10 30827030 30827102 -109489663 - MIR SINE MIR -2 260 187 2283 112 0 3 chr10 30829722 30830025 -109486740 + AluSg SINE Alu 1 302 -8 22 35 0 0 chr10 30830114 30830143 -109486622 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30830168 30830197 -109486568 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30830678 30830705 -109486060 + AT_rich Low_complexity Low_complexity 1 27 0 361 195 51 13 chr10 30831651 30831766 -109484999 - MIR SINE MIR -62 146 35 234 128 0 0 chr10 30833092 30833131 -109483634 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 239 297 62 47 chr10 30833406 30833534 -109483231 + MIR SINE MIR 120 249 -13 1195 210 48 4 chr10 30833718 30833990 -109482775 - L1MC4a LINE L1 -1311 6497 6214 43 20 0 0 chr10 30834662 30834712 -109482053 + AT_rich Low_complexity Low_complexity 1 50 0 1006 188 84 17 chr10 30834788 30835086 -109481679 - L1M4 LINE L1 -2921 3225 2908 6613 63 59 0 chr10 30835087 30836267 -109480498 - L1PA7 LINE L1 -4 6150 4937 1919 178 54 11 chr10 30836545 30836916 -109479849 - MLT1B LTR MaLR 0 390 4 272 91 136 0 chr10 30837239 30837283 -109479482 - MADE1 DNA Mariner 0 80 31 2109 97 0 0 chr10 30837283 30837551 -109479214 + AluY SINE Alu 44 311 0 549 293 34 22 chr10 30837571 30837905 -109478860 - L1MC4a LINE L1 -157 5964 5630 234 0 0 0 chr10 30838715 30838741 -109478024 + (GA)n Simple_repeat Simple_repeat 1 26 0 291 140 0 0 chr10 30838934 30838984 -109477781 + (CA)n Simple_repeat Simple_repeat 1 50 0 523 299 81 9 chr10 30839129 30839343 -109477422 + MIR SINE MIR 13 245 -17 1692 117 0 0 chr10 30839343 30839574 -109477191 + AluSg/x SINE Alu 82 312 0 258 248 23 78 chr10 30839680 30839809 -109476956 - MLT1K LTR MaLR -40 548 427 28 0 0 0 chr10 30839882 30839910 -109476855 + AT_rich Low_complexity Low_complexity 1 28 0 580 162 111 8 chr10 30840343 30840460 -109476305 - FLAM_A SINE Alu -4 129 1 5218 176 15 8 chr10 30841168 30842934 -109473831 + L1PA16 LINE L1 4197 5970 -196 22 0 0 0 chr10 30842934 30842956 -109473809 + AT_rich Low_complexity Low_complexity 1 22 0 243 315 120 0 chr10 30844377 30844485 -109472280 - MIR SINE MIR -35 227 107 526 283 108 55 chr10 30845729 30846203 -109470562 + L2 LINE L2 2815 3313 0 2387 108 0 0 chr10 30846326 30846631 -109470134 - AluSc SINE Alu -4 305 1 1280 251 58 28 chr10 30846665 30847059 -109469706 + MLT1I LTR MaLR 2 407 -2 397 246 82 0 chr10 30847192 30847314 -109469451 - MIR SINE MIR -28 234 103 589 229 157 0 chr10 30847327 30847480 -109469285 + MER5A DNA MER1_type 13 189 0 254 224 0 17 chr10 30848467 30848525 -109468240 - L2 LINE L2 -2 3270 3214 364 277 84 24 chr10 30849437 30849603 -109467162 + L3 LINE CR1 736 911 -666 736 290 65 38 chr10 30849762 30849891 -109466874 - L1ME4a LINE L1 -93 6028 5904 1848 144 28 14 chr10 30849891 30850182 -109466583 - AluJb SINE Alu -17 295 1 736 290 65 38 chr10 30850182 30850683 -109466082 - L1ME4a LINE L1 -217 5904 5381 181 182 0 0 chr10 30851207 30851240 -109465525 + L2 LINE L2 3278 3310 -3 352 293 0 9 chr10 30851730 30851836 -109464929 + MER5A DNA MER1_type 43 147 -42 417 263 113 16 chr10 30852326 30852520 -109464245 + MIR SINE MIR 50 262 0 537 191 9 0 chr10 30854087 30854192 -109462573 + AluSg/x SINE Alu 205 310 0 334 286 96 28 chr10 30854298 30854476 -109462289 + MIR SINE MIR 8 197 -65 281 306 122 14 chr10 30854746 30854893 -109461872 + MIR SINE MIR 100 262 0 233 350 62 0 chr10 30854898 30854978 -109461787 - L2 LINE L2 -19 3253 3169 376 252 222 9 chr10 30855033 30855366 -109461399 + L1ME4a LINE L1 5718 6121 0 241 254 0 16 chr10 30855939 30856002 -109460763 + L1MC3 LINE L1 5525 5586 -2222 212 270 135 0 chr10 30856405 30856479 -109460286 + L2 LINE L2 3230 3313 0 640 253 0 30 chr10 30856928 30857094 -109459671 - MLT2A2 LTR ERVL 0 453 293 246 288 14 0 chr10 30857206 30857279 -109459486 + MIR SINE MIR 155 228 -34 1861 250 76 6 chr10 30858158 30858642 -109458123 + LTR33 LTR ERVL 2 519 -2 325 290 94 0 chr10 30858645 30858783 -109457982 + MIR3 SINE MIR 33 183 -25 404 348 62 4 chr10 30859050 30859277 -109457488 + MIR SINE MIR 1 240 -22 854 243 66 52 chr10 30859443 30859805 -109456960 + L1MC3 LINE L1 6047 6413 -1372 365 289 47 78 chr10 30859910 30860166 -109456599 - L1MEd LINE L1 -5010 1109 862 2313 248 104 12 chr10 30860248 30862925 -109453840 - L1MD3 LINE L1 -10 7985 4899 2366 103 0 0 chr10 30862925 30863227 -109453538 - AluSg SINE Alu -5 305 4 2313 248 104 12 chr10 30863227 30863414 -109453351 - L1MD3 LINE L1 -3096 4899 4730 417 291 60 87 chr10 30863747 30864149 -109452616 + MLT1J LTR MaLR 121 511 0 281 301 60 8 chr10 30864470 30864603 -109452162 - MER117 DNA MER1_type -50 147 8 477 285 53 87 chr10 30864852 30865231 -109451534 + MLT1J LTR MaLR 53 458 -53 224 118 0 0 chr10 30866048 30866082 -109450683 + MIR SINE MIR 116 149 -113 211 295 147 0 chr10 30866902 30867058 -109449707 - L2 LINE L2 -254 3059 2881 402 271 20 26 chr10 30867826 30867977 -109448788 + MLT1K LTR MaLR 412 561 -27 264 280 15 83 chr10 30868060 30868192 -109448573 - MIR SINE MIR -56 152 30 379 260 67 33 chr10 30868324 30868474 -109448291 + MIR3 SINE MIR 3 157 -51 517 129 0 59 chr10 30868975 30869076 -109447689 + AluSg/x SINE Alu 218 312 0 195 183 26 174 chr10 30869118 30869188 -109447577 - MIR SINE MIR -2 260 212 1905 164 7 0 chr10 30869188 30869493 -109447272 - AluJb SINE Alu -5 307 1 195 183 26 174 chr10 30869493 30869537 -109447228 - MIR SINE MIR -50 212 163 22 0 0 0 chr10 30870442 30870464 -109446301 + AT_rich Low_complexity Low_complexity 1 22 0 2287 84 3 3 chr10 30871941 30872254 -109444511 - AluSp SINE Alu 0 313 1 1801 174 3 19 chr10 30872274 30872591 -109444174 - AluJb SINE Alu 0 312 1 732 74 0 11 chr10 30873461 30873556 -109443209 - AluY SINE Alu -179 132 39 2236 128 0 0 chr10 30873578 30873876 -109442889 - AluSx SINE Alu -14 298 1 1663 177 30 7 chr10 30873903 30874202 -109442563 + AluJo SINE Alu 1 306 -6 2261 123 0 0 chr10 30875298 30875599 -109441166 - AluSx SINE Alu -11 301 1 1977 117 75 34 chr10 30875819 30876177 -109440588 + THE1C LTR MaLR 1 373 -2 210 269 268 0 chr10 30877142 30877236 -109439529 - MIR SINE MIR -75 133 47 1676 186 3 31 chr10 30877241 30877559 -109439206 + AluJo SINE Alu 1 309 -3 2238 106 27 0 chr10 30877568 30877869 -109438896 + AluSg SINE Alu 1 309 -1 2241 87 32 23 chr10 30878145 30878455 -109438310 + AluSq SINE Alu 1 313 0 187 0 88 29 chr10 30879146 30879180 -109437585 + CT-rich Low_complexity Low_complexity 5 40 0 2209 100 17 0 chr10 30879194 30879484 -109437281 - AluSx SINE Alu -17 295 1 257 0 30 0 chr10 30879499 30879532 -109437233 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 1057 122 6 6 chr10 30879547 30879727 -109437038 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2027 160 0 0 chr10 30879749 30880056 -109436709 - AluSx SINE Alu -5 307 1 1719 169 3 10 chr10 30880139 30880435 -109436330 - AluJb SINE Alu -18 294 1 1131 257 78 50 chr10 30880469 30881221 -109435544 - L2 LINE L2 0 3313 2535 2387 95 0 3 chr10 30881221 30881525 -109435240 - AluSx SINE Alu -9 303 1 1131 257 78 50 chr10 30881525 30881602 -109435163 - L2 LINE L2 -778 2535 2462 992 28 14 14 chr10 30881789 30881931 -109434834 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 229 152 13 101 chr10 30882197 30882276 -109434489 - L1P LINE L1 -3098 3048 2977 354 323 83 6 chr10 30882726 30882911 -109433854 - MIR SINE MIR -54 154 1 2257 103 17 0 chr10 30882925 30883226 -109433539 - AluSq SINE Alu -7 306 1 509 222 28 0 chr10 30883490 30883598 -109433167 - MIR SINE MIR -146 116 6 1763 146 0 32 chr10 30883850 30884154 -109432611 + AluJo SINE Alu 12 306 0 971 142 26 7 chr10 30884549 30884704 -109432061 - LTR26E LTR ERV1 0 622 465 211 150 33 0 chr10 30884734 30884794 -109431971 + (TA)n Simple_repeat Simple_repeat 1 62 0 682 144 9 9 chr10 30884841 30884952 -109431813 - AluJo SINE Alu -117 195 85 2285 129 10 50 chr10 30884952 30885354 -109431411 - LTR26B LTR ERV1 -145 386 1 2993 132 16 0 chr10 30885490 30885931 -109430834 + MER83 LTR ERV1 1 448 0 981 193 0 0 chr10 30886084 30886260 -109430505 + FRAM SINE Alu 1 174 -2 858 278 93 10 chr10 30886555 30886857 -109429908 + LTR33A LTR ERVL 1 327 -196 492 206 0 0 chr10 30886895 30886987 -109429778 + LTR33A LTR ERVL 419 510 -13 180 305 211 33 chr10 30887178 30887755 -109429010 - L2 LINE L2 -674 2640 1961 2961 112 7 2 chr10 30887756 30888186 -109428579 + MER57B LTR ERV1 3 434 0 796 151 7 7 chr10 30888623 30888775 -109427990 + CT-rich Low_complexity Low_complexity 3 154 0 2267 100 7 0 chr10 30888777 30889077 -109427688 - AluSx SINE Alu -2 310 9 310 208 25 138 chr10 30889664 30889823 -109426942 - MER5B DNA MER1_type -4 174 34 5180 151 49 36 chr10 30889882 30890506 -109426259 + L1MA9 LINE L1 5160 5774 -538 2111 126 3 0 chr10 30890506 30890815 -109425950 - AluSx SINE Alu 0 310 1 5180 151 49 36 chr10 30890815 30891167 -109425598 + L1MA9 LINE L1 5774 6120 -192 387 0 0 0 chr10 30891167 30891210 -109425555 + (CA)n Simple_repeat Simple_repeat 1 43 0 5180 151 49 36 chr10 30891210 30891330 -109425435 + L1MA9 LINE L1 6120 6270 -42 1510 210 28 3 chr10 30891330 30891616 -109425149 - AluJo SINE Alu -11 301 9 5180 151 49 36 chr10 30891616 30891646 -109425119 + L1MA9 LINE L1 6270 6298 -14 749 112 28 98 chr10 30891720 30891863 -109424902 - FLAM_C SINE Alu 0 133 1 334 259 62 0 chr10 30892719 30892800 -109423965 - L2 LINE L2 -2 3311 3226 2574 170 70 20 chr10 30892843 30893397 -109423368 + MER34C LTR ERV1 1 582 -3 423 275 46 51 chr10 30893500 30893705 -109423060 - L2 LINE L2 -234 3079 2875 2839 143 53 42 chr10 30893705 30894230 -109422535 - LTR26B LTR ERV1 0 531 1 423 275 46 51 chr10 30894230 30894309 -109422456 - L2 LINE L2 -438 2875 2797 1991 229 45 46 chr10 30894330 30894900 -109421865 + MER77 LTR ERV1 54 601 -4 318 245 11 43 chr10 30894937 30895031 -109421734 - L2 LINE L2 -513 2801 2711 199 54 54 0 chr10 30895031 30895068 -109421697 + (TA)n Simple_repeat Simple_repeat 2 40 0 30498 92 7 21 chr10 30895068 30895540 -109421225 - L1PA7 LINE L1 -6 6463 5986 2335 88 0 3 chr10 30895540 30895835 -109420930 - AluSc SINE Alu -13 296 3 30498 92 7 21 chr10 30895835 30899365 -109417400 - L1PA7 LINE L1 -483 5986 2557 2369 95 0 0 chr10 30899365 30899659 -109417106 - AluSq SINE Alu -19 294 1 30498 92 7 21 chr10 30899659 30901036 -109415729 - L1PA7 LINE L1 -3912 2557 1162 659 124 0 0 chr10 30901034 30901123 -109415642 - L1PA7 LINE L1 -6365 96 8 * 1888 142 7 33 chr10 30901134 30901436 -109415329 - AluJo SINE Alu -18 294 1 638 287 102 20 chr10 30901436 30901788 -109414977 - L2 LINE L2 -600 2714 2334 828 167 8 0 chr10 30901817 30901949 -109414816 - FLAM_C SINE Alu 0 133 1 257 94 0 0 chr10 30902051 30902104 -109414661 - LTR66 LTR ERVL -163 447 395 1193 157 4 68 chr10 30902593 30902828 -109413937 - AluJb SINE Alu -8 304 85 809 176 0 0 chr10 30902907 30903032 -109413733 - FLAM_A SINE Alu -8 125 1 63 44 0 0 chr10 30904158 30904249 -109412516 + AT_rich Low_complexity Low_complexity 1 91 0 283 137 32 65 chr10 30904257 30904381 -109412384 + (TTATA)n Simple_repeat Simple_repeat 2 121 0 2126 114 0 0 chr10 30904833 30905113 -109411652 - AluSg SINE Alu -30 280 1 2121 122 3 3 chr10 30906214 30906509 -109410256 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 30906825 30906847 -109409918 + AT_rich Low_complexity Low_complexity 1 22 0 281 226 73 48 chr10 30906848 30906972 -109409793 - L1MC5 LINE L1 -36 7925 7799 784 260 91 21 chr10 30907084 30907369 -109409396 + L1ME LINE L1 5260 5564 -600 1817 179 3 3 chr10 30907369 30907670 -109409095 + AluJb SINE Alu 1 301 -11 2210 122 3 0 chr10 30907750 30908054 -109408711 + AluSq SINE Alu 1 305 -8 2165 119 0 0 chr10 30908144 30908437 -109408328 + AluSx SINE Alu 16 308 -4 1830 209 61 2 chr10 30908767 30909160 -109407605 - MER90 LTR ERV1 -20 594 179 742 98 49 0 chr10 30909158 30909260 -109407505 - U6 snRNA snRNA 0 107 1 * 1045 210 5 10 chr10 30909258 30909463 -109407302 - MER90 LTR ERV1 -410 204 1 904 268 74 43 chr10 30909506 30909857 -109406908 - MLT1J LTR MaLR -7 504 143 256 311 33 25 chr10 30912768 30912890 -109403875 - MIR3 SINE MIR -32 176 54 25 31 0 0 chr10 30912957 30912989 -109403776 + AT_rich Low_complexity Low_complexity 1 32 0 2157 135 3 0 chr10 30912989 30913292 -109403473 + AluSx SINE Alu 1 304 -8 1169 178 5 0 chr10 30913417 30913608 -109403157 + AluJb SINE Alu 89 280 -32 1688 180 34 17 chr10 30914646 30915002 -109401763 - MLT1A1 LTR MaLR -3 362 1 2213 122 0 0 chr10 30915093 30915388 -109401377 - AluY SINE Alu -16 295 1 2043 83 0 24 chr10 30918245 30918571 -109398194 - AluY SINE Alu 0 319 1 1564 185 17 3 chr10 30918574 30918866 -109397899 - AluJo SINE Alu -16 296 1 2384 86 0 9 chr10 30919036 30919351 -109397414 - AluSq SINE Alu -1 312 1 189 0 0 0 chr10 30919562 30919583 -109397182 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 9183 60 10 110 chr10 30919600 30921138 -109395627 + SVA Other Other 2 1385 -1 22 0 0 0 chr10 30921138 30921160 -109395605 + AT_rich Low_complexity Low_complexity 1 22 0 804 160 0 8 chr10 30921607 30921732 -109395033 + FLAM_C SINE Alu 1 124 -9 2679 96 14 14 chr10 30921751 30922115 -109394650 + THE1B LTR MaLR 1 364 0 890 173 23 12 chr10 30922115 30922288 -109394477 + FRAM SINE Alu 2 176 0 1903 141 138 23 chr10 30923224 30923608 -109393157 + MSTA LTR MaLR 1 428 0 469 253 81 81 chr10 30923647 30923868 -109392897 + HAL1 LINE L1 863 1083 -1424 635 107 0 0 chr10 30923870 30923954 -109392811 - AluJ SINE Alu -21 291 208 821 132 0 96 chr10 30923955 30924003 -109392762 - AluJ SINE Alu -161 151 100 2304 150 68 5 chr10 30924003 30924402 -109392363 - MSTA LTR MaLR 0 428 5 821 132 0 96 chr10 30924402 30924520 -109392245 - AluJ SINE Alu -212 100 1 874 178 0 0 chr10 30924521 30924671 -109392094 - MER5A DNA MER1_type -36 153 4 645 332 0 23 chr10 30924687 30924904 -109391861 + MIR SINE MIR 51 262 0 1416 148 65 7 chr10 30925085 30925362 -109391403 + AluJb SINE Alu 3 295 -17 1610 179 10 14 chr10 30925904 30926201 -109390564 + AluJb SINE Alu 1 296 -16 1054 159 0 0 chr10 30926716 30926886 -109389879 - FRAM SINE Alu -5 171 2 261 83 0 0 chr10 30927954 30927990 -109388775 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 216 21 72 chr10 30928010 30928107 -109388658 - L1MC4 LINE L1 -1337 6705 6614 2324 168 0 57 chr10 30928116 30928186 -109388579 - Tigger2a DNA MER2_type -2274 434 362 1905 126 0 23 chr10 30928186 30928487 -109388278 - AluSx SINE Alu -18 294 1 2217 91 0 0 chr10 30928497 30928793 -109387972 - AluSq SINE Alu -16 297 2 2324 168 0 57 chr10 30928793 30929170 -109387595 - Tigger2a DNA MER2_type -2355 353 2 1995 92 8 0 chr10 30929344 30929604 -109387161 - MLT2A2 LTR ERVL -191 262 1 1445 196 112 16 chr10 30929604 30929915 -109386850 - MLT1D LTR MaLR -163 342 2 428 68 17 0 chr10 30929952 30930011 -109386754 + MADE1 DNA Mariner 3 62 -18 365 113 0 0 chr10 30930009 30930062 -109386703 + MADE1 DNA Mariner 28 80 0 * 1574 163 3 34 chr10 30930194 30930488 -109386277 + AluJo SINE Alu 1 285 -27 1578 187 0 16 chr10 30930583 30930888 -109385877 - AluJo SINE Alu -12 300 1 208 333 71 0 chr10 30931306 30931390 -109385375 - MIR3 SINE MIR -11 197 108 362 158 53 26 chr10 30932028 30932104 -109384661 - MER58 DNA MER1_type -1 2419 2342 1692 158 3 7 chr10 30932120 30932411 -109384354 - AluJo SINE Alu -22 290 1 1431 41 0 0 chr10 30932438 30932608 -109384157 - AluY SINE Alu -18 293 124 394 141 295 0 chr10 30932620 30932698 -109384067 - MER58 DNA MER1_type -109 106 6 511 238 9 103 chr10 30932708 30932922 -109383843 - L2 LINE L2 -555 2759 2566 531 297 83 21 chr10 30934416 30934608 -109382157 - MIR SINE MIR -5 257 54 482 218 59 0 chr10 30934886 30934987 -109381778 - ORSL DNA AcHobo 0 275 169 403 335 18 36 chr10 30935297 30935464 -109381301 - MIR3 SINE MIR -24 184 21 29 47 0 0 chr10 30935816 30935859 -109380906 + AT_rich Low_complexity Low_complexity 1 43 0 3128 157 34 12 chr10 30935880 30936162 -109380603 - L1PA16 LINE L1 -9 6157 5883 1656 151 11 4 chr10 30936162 30936461 -109380304 + AluJb SINE Alu 3 303 0 3128 157 34 12 chr10 30936461 30936737 -109380028 - L1PA16 LINE L1 -283 5883 5586 553 229 8 0 chr10 30938345 30938463 -109378302 + MER94 DNA DNA 15 133 -1 24 0 0 0 chr10 30941347 30941371 -109375394 + AT_rich Low_complexity Low_complexity 1 24 0 423 265 124 80 chr10 30941449 30941876 -109374889 - L1ME4a LINE L1 -77 6044 5599 2157 188 8 48 chr10 30942015 30942458 -109374307 + MLT2B3 LTR ERVL 1 374 -146 1190 187 20 138 chr10 30942487 30942648 -109374117 + AluYb8 SINE Alu 1 101 -207 2096 114 3 0 chr10 30942648 30942938 -109373827 - AluSx SINE Alu -21 291 1 1190 187 20 138 chr10 30942938 30943124 -109373641 + AluYb8 SINE Alu 101 307 -1 181 365 144 19 chr10 30943242 30943450 -109373315 + L2 LINE L2 2381 2614 -700 894 123 0 36 chr10 30943717 30943855 -109372910 + FLAM_C SINE Alu 1 133 0 1142 176 22 36 chr10 30943892 30944114 -109372651 - MER20 DNA MER1_type 0 219 1 185 296 123 0 chr10 30944120 30944201 -109372564 + L2 LINE L2 2767 2857 -457 700 256 59 29 chr10 30944421 30944694 -109372071 - MLT1J1 LTR MaLR -165 281 1 22 0 0 0 chr10 30944929 30944951 -109371814 + AT_rich Low_complexity Low_complexity 1 22 0 2283 93 7 0 chr10 30945294 30945604 -109371161 + AluSx SINE Alu 1 312 0 323 270 0 0 chr10 30945720 30945794 -109370971 + AluJ/FLAM SINE Alu 1 74 -228 617 165 0 0 chr10 30945796 30945893 -109370872 + AluJb SINE Alu 190 286 -26 279 0 0 0 chr10 30945896 30945927 -109370838 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1475 192 0 35 chr10 30946034 30946347 -109370418 + AluJo SINE Alu 1 302 -10 1491 153 102 4 chr10 30947496 30947770 -109368995 + AluJo SINE Alu 3 303 -9 2226 86 0 0 chr10 30947791 30948081 -109368684 + AluSx SINE Alu 1 290 -22 292 197 13 40 chr10 30949544 30949620 -109367145 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 1639 163 14 17 chr10 30949651 30949945 -109366820 - AluJo SINE Alu -19 293 1 362 238 0 0 chr10 30949977 30950057 -109366708 + MIR3 SINE MIR 82 161 -47 195 388 0 0 chr10 30950409 30950494 -109366271 + L3 LINE CR1 400 484 -1093 1567 147 4 47 chr10 30950910 30951189 -109365576 + AluJo SINE Alu 1 267 -45 1680 204 70 103 chr10 30951505 30952138 -109364627 + LTR9 LTR ERV1 1 612 0 28 29 0 0 chr10 30952410 30952445 -109364320 + AT_rich Low_complexity Low_complexity 1 35 0 2354 55 0 3 chr10 30952604 30952896 -109363869 - AluY SINE Alu 0 311 21 1866 140 7 0 chr10 30952925 30953225 -109363540 + AluSx SINE Alu 3 304 -8 1684 139 76 0 chr10 30953864 30954152 -109362613 - L1MA2 LINE L1 -4 6300 5991 876 133 0 15 chr10 30954152 30954287 -109362478 - AluJo/FRAM SINE Alu -46 266 134 1543 148 6 88 chr10 30954288 30954619 -109362146 - AluSg SINE Alu -6 304 1 423 0 0 0 chr10 30954991 30955038 -109361727 + (CA)n Simple_repeat Simple_repeat 2 48 0 274 83 0 0 chr10 30957106 30957142 -109359623 - L2 LINE L2 -6 3307 3272 423 304 7 0 chr10 30957913 30958061 -109358704 + L1ME4a LINE L1 5971 6119 -2 1996 122 0 3 chr10 30959967 30960263 -109356502 - AluSx SINE Alu -17 295 1 4128 139 19 2 chr10 30960282 30960906 -109355859 + MER41B LTR ERV1 1 635 0 202 298 43 0 chr10 30960912 30960959 -109355806 + L2 LINE L2 3262 3310 -3 754 196 74 12 chr10 30961027 30961190 -109355575 + FRAM SINE Alu 4 176 0 421 154 22 0 chr10 30961228 30961319 -109355446 + GA-rich Low_complexity Low_complexity 3 95 0 249 274 14 60 chr10 30961992 30962125 -109354640 + L1MC4a LINE L1 4489 4610 -1536 2150 179 18 18 chr10 30962125 30962521 -109354244 - MSTD LTR MaLR 0 396 1 249 274 14 60 chr10 30962521 30962602 -109354163 + L1MC4a LINE L1 4610 4693 -1453 1560 171 20 43 chr10 30962603 30962907 -109353858 - AluJo SINE Alu -15 297 1 2026 120 3 0 chr10 30962966 30963257 -109353508 + AluSg SINE Alu 1 292 -18 305 294 28 28 chr10 30963303 30963412 -109353353 + L1MC4a LINE L1 5217 5325 -821 2299 109 3 0 chr10 30963491 30963813 -109352952 - pTR5 LTR ERV1 -2041 397 75 297 198 55 63 chr10 30963813 30963946 -109352819 - LTR30 LTR ERV1 -94 606 375 3258 165 61 32 chr10 30963946 30964707 -109352058 - pTR5 LTR ERV1 -439 1999 6 515 261 79 62 chr10 30964772 30965063 -109351702 + L1MC4a LINE L1 5530 5825 -1983 1929 112 54 3 chr10 30965068 30965363 -109351402 + AluSx SINE Alu 1 310 -2 1359 116 98 5 chr10 30965435 30965659 -109351106 + AluSx SINE Alu 60 304 -8 214 162 0 0 chr10 30965787 30965824 -109350941 + (TG)n Simple_repeat Simple_repeat 1 37 0 233 233 17 0 chr10 30966148 30966208 -109350557 + L1 LINE L1 5221 5281 -865 2314 54 40 0 chr10 30966436 30966733 -109350032 - AluY SINE Alu -2 309 1 2635 96 53 50 chr10 30967730 30967882 -109348883 - LTR56 LTR ERV1 0 445 295 2292 83 21 3 chr10 30967882 30968172 -109348593 + AluSc SINE Alu 1 295 -14 2635 96 53 50 chr10 30968172 30968456 -109348309 - LTR56 LTR ERV1 -150 295 8 30 59 0 0 chr10 30968922 30968973 -109347792 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr10 30968985 30969014 -109347751 + AT_rich Low_complexity Low_complexity 1 29 0 1513 166 0 4 chr10 30969096 30969343 -109347422 - AluJo SINE Alu -9 303 58 1177 166 19 9 chr10 30969376 30969587 -109347178 - L1PA16 LINE L1 -12 6154 5942 1847 159 0 30 chr10 30970014 30970310 -109346455 + AluJo SINE Alu 1 287 -25 408 20 0 0 chr10 30970310 30970359 -109346406 + (CATA)n Simple_repeat Simple_repeat 2 50 0 255 191 0 0 chr10 30971740 30971803 -109344962 + CT-rich Low_complexity Low_complexity 2 64 0 184 193 0 70 chr10 30972380 30972437 -109344328 - L2 LINE L2 0 3313 3261 243 253 242 22 chr10 30972558 30972740 -109344025 + L1ME3A LINE L1 2400 2621 -3525 183 222 0 0 chr10 30972766 30972811 -109343954 + (TATG)n Simple_repeat Simple_repeat 3 47 0 318 299 13 0 chr10 30972880 30972957 -109343808 - MER2 DNA MER2_type 0 345 268 204 170 21 21 chr10 30972966 30973013 -109343752 + A-rich Low_complexity Low_complexity 4 50 0 1258 129 5 15 chr10 30973032 30973233 -109343532 - MER2 DNA MER2_type -134 211 13 1037 295 144 18 chr10 30973281 30973366 -109343399 + L1ME3A LINE L1 2797 2870 -3276 2557 68 0 0 chr10 30973366 30973674 -109343091 + AluSq SINE Alu 1 308 -5 1037 295 144 18 chr10 30973674 30974844 -109341921 + L1ME3A LINE L1 2870 4256 -1890 433 254 146 84 chr10 30974871 30975163 -109341602 - LTR33 LTR ERVL 0 521 249 396 0 0 0 chr10 30975163 30975207 -109341558 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1838 131 0 7 chr10 30975216 30975491 -109341274 - AluSx SINE Alu -39 273 1 2278 117 0 0 chr10 30975497 30975804 -109340961 - AluSx SINE Alu -5 307 1 433 254 146 84 chr10 30975804 30975979 -109340786 - LTR33 LTR ERVL -283 238 7 1010 248 65 98 chr10 30975982 30976210 -109340555 + L1ME3A LINE L1 4420 4654 -1492 2044 111 50 0 chr10 30976210 30976490 -109340275 - AluSx SINE Alu -10 302 9 1010 248 65 98 chr10 30976490 30977158 -109339607 + L1ME3A LINE L1 4654 5275 -871 1009 274 53 12 chr10 30977234 30977573 -109339192 + L1ME3A LINE L1 5276 5628 -534 342 135 0 0 chr10 30977573 30977625 -109339140 + MER116 DNA Mariner 29 80 0 384 265 89 56 chr10 30977626 30977948 -109338817 + L1ME3A LINE L1 5641 5975 -195 2028 128 3 26 chr10 30978237 30978543 -109338222 + AluSx SINE Alu 1 299 -13 219 133 133 83 chr10 30978726 30978786 -109337979 + L2 LINE L2 3246 3308 -5 242 284 59 10 chr10 30978795 30978897 -109337868 + L1ME LINE L1 5373 5479 -2329 271 247 0 52 chr10 30979114 30979191 -109337574 + L1ME LINE L1 5746 5818 -303 2356 81 0 13 chr10 30979258 30979565 -109337200 - AluY SINE Alu -8 303 1 2058 130 0 7 chr10 30980286 30980585 -109336180 - AluSx SINE Alu -15 297 1 1761 130 0 11 chr10 30981170 30981432 -109335333 + AluJb SINE Alu 40 298 -14 1680 100 0 9 chr10 30981589 30981818 -109334947 - AluSc SINE Alu 0 309 83 40 0 0 0 chr10 30982596 30982636 -109334129 + AT_rich Low_complexity Low_complexity 1 40 0 1803 159 40 10 chr10 30983234 30983412 -109333353 - AluJo SINE Alu -1 311 119 195 42 0 0 chr10 30983412 30983436 -109333329 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1803 159 40 10 chr10 30983436 30983559 -109333206 - AluJo SINE Alu -193 119 1 536 198 0 37 chr10 30984661 30985033 -109331732 + CT-rich Low_complexity Low_complexity 1 180 0 292 229 0 0 chr10 30985033 30985094 -109331671 - AluJo SINE Alu 0 673 241 1417 154 13 21 chr10 30985207 30985440 -109331325 - AluJo SINE Alu -81 231 1 1667 188 4 0 chr10 30985872 30986149 -109330616 + AluJb SINE Alu 3 280 -32 741 162 31 12 chr10 30986149 30986391 -109330374 + GA-rich Low_complexity Low_complexity 1 246 0 1579 139 34 19 chr10 30986910 30987176 -109329589 + L1MA6 LINE L1 6031 6300 0 1611 185 7 7 chr10 30987292 30987568 -109329197 - AluJo SINE Alu -36 276 1 279 0 0 0 chr10 30988089 30988120 -109328645 + (A)n Simple_repeat Simple_repeat 1 31 0 1561 132 64 39 chr10 30988821 30989101 -109327664 - AluJo SINE Alu -15 297 11 898 294 23 0 chr10 30990351 30990616 -109326149 + AluJo SINE Alu 11 281 -31 21 36 0 0 chr10 30990660 30990688 -109326077 + AT_rich Low_complexity Low_complexity 1 28 0 366 250 23 0 chr10 30991331 30991419 -109325346 + L1MC4 LINE L1 6614 6703 -1339 243 88 0 0 chr10 30991424 30991458 -109325307 + (TA)n Simple_repeat Simple_repeat 1 34 0 2200 112 0 3 chr10 30991458 30991754 -109325011 - AluSx SINE Alu -17 295 1 325 276 113 116 chr10 30992378 30992758 -109324007 - L2 LINE L2 -131 3182 2804 1811 271 34 20 chr10 30992822 30993375 -109323390 - L2 LINE L2 -645 2669 2109 954 294 118 47 chr10 30993379 30993627 -109323138 - L2 LINE L2 -2477 837 608 3719 158 29 2 chr10 30993627 30994214 -109322551 - LTR26 LTR ERV1 0 603 1 954 294 118 47 chr10 30994214 30994359 -109322406 - L2 LINE L2 -2706 608 475 2327 101 0 0 chr10 30994359 30994657 -109322108 + AluSc SINE Alu 1 298 -11 954 294 118 47 chr10 30994657 30994898 -109321867 - L2 LINE L2 -2839 475 157 876 181 28 16 chr10 30995590 30995772 -109320993 - AluJo SINE Alu -11 301 118 262 128 0 0 chr10 30995786 30995825 -109320940 - MER65B LTR ERV1 -492 39 1 401 200 36 27 chr10 30995928 30996038 -109320727 + L2 LINE L2 2435 2545 -769 983 136 0 0 chr10 30996044 30996184 -109320581 + FRAM SINE Alu 1 140 -36 584 167 0 0 chr10 30996184 30996274 -109320491 - AluJ/FLAM SINE Alu -221 91 2 1010 333 94 7 chr10 30996275 30996830 -109319935 + HERV16 LTR ERVL 151 753 -4243 513 277 99 0 chr10 30996969 30997110 -109319655 + HERV16 LTR ERVL 910 1064 -3932 429 257 71 0 chr10 30997159 30997272 -109319493 + HERV16 LTR ERVL 1150 1270 -3726 2077 143 3 0 chr10 30997425 30997719 -109319046 + AluSx SINE Alu 1 295 -17 852 279 66 4 chr10 30997733 30997977 -109318788 + HERV16 LTR ERVL 1686 1944 -3052 700 309 115 26 chr10 30998002 30998471 -109318294 + LTR16B LTR ERVL 8 462 -2 1681 145 11 21 chr10 30999780 31000063 -109316702 + AluJb SINE Alu 18 297 -15 453 316 46 6 chr10 31000255 31000429 -109316336 + AluJo SINE Alu 91 271 -41 2050 138 0 3 chr10 31001036 31001347 -109315418 - AluJo SINE Alu -2 310 1 376 249 33 84 chr10 31001798 31002011 -109314754 - L2 LINE L2 -5 3308 3107 373 229 108 90 chr10 31002069 31002188 -109314577 - L1ME4a LINE L1 -295 5826 5711 399 41 0 0 chr10 31002188 31002237 -109314528 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 373 229 108 90 chr10 31002237 31002258 -109314507 - L1ME4a LINE L1 -410 5711 5692 2072 109 22 0 chr10 31002258 31002533 -109314232 - AluSx SINE Alu -22 290 10 308 64 21 0 chr10 31002540 31002587 -109314178 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 373 229 108 90 chr10 31002587 31002660 -109314105 - L1ME4a LINE L1 -434 5687 5600 1598 150 31 69 chr10 31002674 31002994 -109313771 - AluJb SINE Alu -4 308 1 373 231 0 0 chr10 31003426 31003504 -109313261 + MER116 DNA Mariner 2 79 -1 1326 105 6 11 chr10 31003740 31003921 -109312844 + L1PB1 LINE L1 5972 6151 0 232 121 0 0 chr10 31003961 31003994 -109312771 + LTR54 LTR ERV1 407 439 -71 2324 105 0 0 chr10 31004011 31004307 -109312458 - AluSq SINE Alu -17 296 1 270 267 99 30 chr10 31004640 31004741 -109312024 - MLT1L LTR MaLR -137 478 371 2228 116 7 0 chr10 31004840 31005150 -109311615 + AluSx SINE Alu 1 312 0 318 290 19 37 chr10 31005173 31005335 -109311430 - MLT1L LTR MaLR -435 180 22 1267 62 0 19 chr10 31006335 31006525 -109310240 - AluSp SINE Alu 0 315 129 1858 133 0 14 chr10 31006564 31006850 -109309915 + AluJb SINE Alu 1 282 -30 471 78 0 0 chr10 31006851 31006915 -109309850 + (AAATG)n Simple_repeat Simple_repeat 2 65 0 1675 177 23 48 chr10 31007643 31007953 -109308812 + AluJo SINE Alu 1 302 -10 665 303 82 22 chr10 31008504 31008871 -109307894 + L1ME LINE L1 5391 5779 -342 25 0 0 0 chr10 31008889 31008914 -109307851 + AT_rich Low_complexity Low_complexity 1 25 0 723 285 51 5 chr10 31009011 31009225 -109307540 + MIR SINE MIR 26 249 -13 198 0 0 0 chr10 31009618 31009640 -109307125 + (TA)n Simple_repeat Simple_repeat 2 23 0 1683 284 156 7 chr10 31009658 31009933 -109306832 - HAL1 LINE L1 -1643 864 631 1703 132 55 14 chr10 31009933 31010222 -109306543 - AluJo SINE Alu -7 305 5 1683 284 156 7 chr10 31010222 31010697 -109306068 - HAL1 LINE L1 -1876 631 2 318 326 7 29 chr10 31011163 31011301 -109305464 - MIR3 SINE MIR -28 180 46 1854 129 0 24 chr10 31011582 31011869 -109304896 + AluSp SINE Alu 3 282 -31 384 257 134 0 chr10 31012253 31012424 -109304341 - HAL1 LINE L1 -1646 861 668 1233 299 122 9 chr10 31012459 31012525 -109304240 - HAL1 LINE L1 -1903 604 547 1719 128 55 14 chr10 31012525 31012814 -109303951 - AluJo SINE Alu -7 305 5 1233 299 122 9 chr10 31012814 31013289 -109303476 - HAL1 LINE L1 -1960 547 2 337 303 7 70 chr10 31013755 31013897 -109302868 - MIR3 SINE MIR -28 180 48 2254 86 0 26 chr10 31014174 31014477 -109302288 + AluSp SINE Alu 3 297 -16 2211 138 33 30 chr10 31014946 31015308 -109301457 - THE1B LTR MaLR 0 364 2 2287 100 10 0 chr10 31016008 31016309 -109300456 - AluSx SINE Alu -8 304 1 816 219 44 11 chr10 31016467 31016650 -109300115 + MER5A DNA MER1_type 1 189 0 249 353 49 38 chr10 31017251 31017435 -109299330 + MER5A DNA MER1_type 3 188 -1 305 372 19 29 chr10 31017519 31017710 -109299055 + MIR SINE MIR 19 207 -55 313 235 10 10 chr10 31017848 31017950 -109298815 + GA-rich Low_complexity Low_complexity 3 104 0 2347 103 3 0 chr10 31017975 31018285 -109298480 + AluSx SINE Alu 1 311 -1 185 313 0 0 chr10 31018295 31018359 -109298406 - MIR SINE MIR -67 195 132 1947 111 0 86 chr10 31018606 31018930 -109297835 - AluSq SINE Alu -17 296 1 1315 81 0 0 chr10 31019887 31020061 -109296704 + L1MA1 LINE L1 6129 6302 0 916 130 0 0 chr10 31020341 31020464 -109296301 - FRAM SINE Alu -24 152 30 213 121 0 0 chr10 31020795 31020828 -109295937 + (TG)n Simple_repeat Simple_repeat 2 34 0 456 296 74 40 chr10 31020926 31021223 -109295542 + L2 LINE L2 3005 3311 -2 22 56 0 0 chr10 31021362 31021398 -109295367 + AT_rich Low_complexity Low_complexity 1 36 0 2171 113 3 0 chr10 31021756 31022040 -109294725 - AluSg SINE Alu -17 293 9 2313 108 36 28 chr10 31023716 31024077 -109292688 - THE1B LTR MaLR 0 364 1 1781 175 0 16 chr10 31024489 31024792 -109291973 + AluJo SINE Alu 1 298 -14 26 30 0 0 chr10 31024795 31024828 -109291937 + AT_rich Low_complexity Low_complexity 1 33 0 213 265 0 0 chr10 31026473 31026522 -109290243 + (CAGCC)n Simple_repeat Simple_repeat 5 53 0 1192 65 75 98 chr10 31027767 31027867 -109288898 + MSTC LTR MaLR 1 102 -326 2279 117 7 0 chr10 31027867 31028174 -109288591 + AluSx SINE Alu 1 309 -3 1192 65 75 98 chr10 31028174 31028287 -109288478 + MSTC LTR MaLR 102 209 -219 2131 125 0 16 chr10 31028287 31028590 -109288175 + AluSx SINE Alu 1 298 -14 313 277 32 0 chr10 31028609 31028703 -109288062 + MER5B DNA MER1_type 80 176 -2 260 244 0 56 chr10 31028737 31028827 -109287938 - MER5A DNA MER1_type -80 109 25 195 274 55 50 chr10 31028906 31028994 -109287771 + MER5A DNA MER1_type 39 135 -54 * 211 230 34 142 chr10 31028983 31029131 -109287634 - MER5B DNA MER1_type -30 148 17 2052 118 66 41 chr10 31029153 31029519 -109287246 - THE1C LTR MaLR 0 375 1 549 310 0 0 chr10 31029519 31029693 -109287072 - MER5B DNA MER1_type -4 174 1 2202 120 0 0 chr10 31030247 31030538 -109286227 - AluSc SINE Alu -18 291 1 240 220 0 0 chr10 31030898 31030948 -109285817 + MLT1K LTR MaLR 524 573 -15 396 269 141 6 chr10 31031766 31031922 -109284843 + MIR3 SINE MIR 19 195 -13 186 43 0 0 chr10 31032252 31032275 -109284490 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 240 279 97 11 chr10 31032286 31032390 -109284375 - MIR SINE MIR -72 136 37 1833 167 3 10 chr10 31033845 31034156 -109282609 - AluJo SINE Alu -3 309 1 4043 146 12 17 chr10 31034725 31035107 -109281658 - L1PA15 LINE L1 0 6165 5786 2396 77 0 10 chr10 31035107 31035405 -109281360 - AluY SINE Alu -16 295 1 4043 146 12 17 chr10 31035405 31035678 -109281087 - L1PA15 LINE L1 -379 5786 5513 215 265 0 0 chr10 31037874 31037923 -109278842 + T-rich Low_complexity Low_complexity 1 49 0 3983 99 9 7 chr10 31038073 31038649 -109278116 + L1PA13 LINE L1 5587 6163 0 276 345 35 9 chr10 31038762 31038878 -109277887 - L1MEc LINE L1 -4738 1658 1540 294 271 78 42 chr10 31039105 31039297 -109277468 - L1MEc LINE L1 -4945 1260 1062 2244 117 0 0 chr10 31039497 31039788 -109276977 - AluSx SINE Alu -21 291 1 662 233 0 0 chr10 31043300 31043429 -109273336 + FLAM_A SINE Alu 4 132 -1 189 0 0 0 chr10 31043429 31043450 -109273315 + (GGA)n Simple_repeat Simple_repeat 1 21 0 641 233 58 59 chr10 31043652 31043918 -109272847 - MLT1D LTR MaLR 0 505 171 2112 117 3 0 chr10 31043918 31044200 -109272565 - AluSp SINE Alu -30 283 1 641 233 58 59 chr10 31044200 31044365 -109272400 - MLT1D LTR MaLR -334 171 7 323 262 48 19 chr10 31044924 31045027 -109271738 + L2 LINE L2 3208 3313 0 199 294 88 29 chr10 31045310 31045412 -109271353 + MIR SINE MIR 23 130 -78 970 138 11 17 chr10 31045442 31045616 -109271149 - AluSp SINE Alu -29 284 112 323 262 48 19 chr10 31045980 31046083 -109270682 + L2 LINE L2 3208 3313 0 293 290 154 54 chr10 31046362 31046461 -109270304 + MIR SINE MIR 4 92 -170 2215 96 3 0 chr10 31046461 31046780 -109269985 - AluSp SINE Alu 0 320 1 293 290 154 54 chr10 31046780 31046900 -109269865 + MIR SINE MIR 92 246 -16 802 167 8 0 chr10 31048472 31048604 -109268161 - FLAM_A SINE Alu 0 133 1 2200 107 0 22 chr10 31048891 31049210 -109267555 - AluSx SINE Alu 0 312 1 321 216 9 18 chr10 31049384 31049495 -109267270 + CT-rich Low_complexity Low_complexity 2 111 0 415 217 21 101 chr10 31049776 31049878 -109266887 + L2 LINE L2 2446 2555 -759 2238 110 0 0 chr10 31049878 31050170 -109266595 + AluSx SINE Alu 1 292 -20 351 0 0 0 chr10 31050170 31050209 -109266556 + (CA)n Simple_repeat Simple_repeat 2 40 0 415 217 21 101 chr10 31050209 31050294 -109266471 + L2 LINE L2 2553 2619 -695 1151 238 87 0 chr10 31050301 31050578 -109266187 - MER63 DNA MER1_type 0 1061 761 1094 186 5 29 chr10 31050595 31050799 -109265966 - AluJo SINE Alu -18 294 96 308 215 0 25 chr10 31051358 31051437 -109265328 - L2 LINE L2 -74 3239 3163 1739 121 0 0 chr10 31052003 31052234 -109264531 + AluSg/x SINE Alu 70 300 -10 2670 50 3 0 chr10 31052235 31052558 -109264207 + L1PA13 LINE L1 5822 6145 -18 2250 108 0 0 chr10 31053100 31053396 -109263369 + AluSg1 SINE Alu 1 296 -13 2125 102 3 7 chr10 31053396 31053680 -109263085 + AluSp SINE Alu 1 283 -30 210 91 0 0 chr10 31054313 31054346 -109262419 + (TG)n Simple_repeat Simple_repeat 2 34 0 337 327 71 15 chr10 31055591 31055857 -109260908 + LTR33 LTR ERVL 241 521 0 947 261 24 10 chr10 31055857 31056148 -109260617 - HAL1 LINE L1 -835 1672 1378 409 247 0 0 chr10 31056157 31056230 -109260535 - Tigger7 DNA MER2_type -11 2476 2404 1399 232 0 4 chr10 31056256 31056510 -109260255 - Tigger7 DNA MER2_type -2234 253 1 2622 259 97 54 chr10 31056528 31057546 -109259219 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31057546 31057567 -109259198 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2622 259 97 54 chr10 31057567 31057787 -109258978 - HAL1 LINE L1 -2137 370 44 2046 230 68 30 chr10 31057787 31058387 -109258378 - MLT1E2 LTR MaLR -1 625 3 2622 259 97 54 chr10 31058387 31058431 -109258334 - HAL1 LINE L1 -2463 44 3 446 325 45 29 chr10 31058463 31058771 -109257994 + L3 LINE CR1 1136 1448 -129 1406 183 68 16 chr10 31058854 31059176 -109257589 + MER44D DNA MER2_type 1 609 0 602 198 33 0 chr10 31059277 31059398 -109257367 - L2 LINE L2 -1 3312 3188 2294 118 0 0 chr10 31059911 31060217 -109256548 - AluSx SINE Alu -2 310 5 557 254 40 23 chr10 31060763 31060936 -109255829 + MIR SINE MIR 86 261 -1 183 328 123 0 chr10 31061137 31061259 -109255506 + MIR SINE MIR 69 205 -57 454 239 26 17 chr10 31062208 31062325 -109254440 + MIR3 SINE MIR 83 200 -8 2305 74 0 0 chr10 31062555 31062878 -109253887 - AluY SINE Alu 0 323 1 442 260 49 16 chr10 31063152 31063275 -109253490 - L2 LINE L2 0 3313 3187 1024 182 51 14 chr10 31063417 31063631 -109253134 - L1MA9 LINE L1 -153 6159 5938 470 118 40 0 chr10 31063631 31063706 -109253059 + L1MA9 LINE L1 6234 6312 0 2462 74 3 0 chr10 31063859 31064157 -109252608 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 31065067 31065353 -109251412 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 31065568 31065713 -109251052 - Tigger3(Golem) DNA MER2_type -1 3028 2882 2211 93 3 7 chr10 31065747 31066049 -109250716 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 31066194 31066348 -109250417 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 31066561 31066615 -109250150 + (CA)n Simple_repeat Simple_repeat 1 53 0 2931 7 0 0 chr10 31067342 31067652 -109249113 - AluY SINE Alu -1 310 1 318 220 0 0 chr10 31067690 31067790 -109248975 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 31068536 31068652 -109248113 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 31068659 31068694 -109248071 + AT_rich Low_complexity Low_complexity 1 35 0 2211 100 28 0 chr10 31068706 31068995 -109247770 + AluSg SINE Alu 3 299 -11 364 217 7 28 chr10 31069240 31069383 -109247382 + T-rich Low_complexity Low_complexity 3 142 0 22 35 0 0 chr10 31069547 31069576 -109247189 + AT_rich Low_complexity Low_complexity 1 29 0 202 122 73 0 chr10 31069672 31069713 -109247052 + (TATG)n Simple_repeat Simple_repeat 1 44 0 956 178 0 6 chr10 31070729 31070898 -109245867 + FRAM SINE Alu 1 161 -15 1301 102 5 5 chr10 31072011 31072207 -109244558 - AluSg/x SINE Alu 0 310 115 677 233 133 89 chr10 31072255 31072598 -109244167 - MER34 LTR ERV1 0 542 167 1939 137 0 7 chr10 31072598 31072897 -109243868 + AluSx SINE Alu 1 297 -15 677 233 133 89 chr10 31072897 31073072 -109243693 - MER34 LTR ERV1 -375 167 1 1353 151 5 0 chr10 31073284 31073496 -109243269 + AluSx SINE Alu 1 213 -99 691 286 44 18 chr10 31074521 31074748 -109242017 + MIR SINE MIR 28 260 -2 4491 51 7 0 chr10 31074805 31075356 -109241409 - L1PA7 LINE L1 -4 6150 5596 1431 159 11 30 chr10 31076000 31076264 -109240501 + AluJo SINE Alu 18 276 -36 180 0 0 0 chr10 31076269 31076289 -109240476 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 234 276 66 0 chr10 31076301 31076377 -109240388 + MER5A DNA MER1_type 52 132 -57 2106 109 10 3 chr10 31076423 31076725 -109240040 - AluSc SINE Alu -5 304 1 1650 136 110 4 chr10 31078900 31079172 -109237593 + AluSx SINE Alu 1 301 -11 5053 185 140 104 chr10 31079615 31081309 -109235456 - MER52A LTR ERV1 0 1755 1 367 340 79 46 chr10 31081987 31082290 -109234475 + L1MC4a LINE L1 4369 4681 -1465 355 287 92 8 chr10 31082302 31082553 -109234212 + L1MC4a LINE L1 4742 5013 -1133 2061 133 0 0 chr10 31082566 31082867 -109233898 + AluSx SINE Alu 1 301 -11 476 283 23 40 chr10 31082921 31083274 -109233491 + L1MC5 LINE L1 7581 7927 -34 764 179 0 0 chr10 31083277 31083400 -109233365 + FLAM_C SINE Alu 2 124 -19 1994 123 7 0 chr10 31083412 31083712 -109233053 + AluSx SINE Alu 1 302 -10 315 259 60 43 chr10 31083712 31083819 -109232946 + L1MC4a LINE L1 5028 5139 -1007 204 138 46 0 chr10 31083851 31083916 -109232849 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 244 249 41 chr10 31084048 31084503 -109232262 + L1MC4a LINE L1 5297 5403 -743 1214 125 87 168 chr10 31084605 31084751 -109232014 - MER44D DNA MER2_type -1882 609 453 1494 194 0 14 chr10 31084751 31085035 -109231730 + AluJo SINE Alu 1 280 -32 1214 125 87 168 chr10 31085035 31085097 -109231668 - MER44D DNA MER2_type -2038 453 388 1855 116 0 72 chr10 31085097 31085417 -109231348 + AluSx SINE Alu 1 297 -15 1214 125 87 168 chr10 31085417 31085576 -109231189 - MER44D DNA MER2_type -2103 388 1 2229 95 0 0 chr10 31086623 31086917 -109229848 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 31086927 31086949 -109229816 + AT_rich Low_complexity Low_complexity 1 22 0 278 310 100 0 chr10 31087892 31087992 -109228773 - MIR SINE MIR -150 112 3 484 245 37 31 chr10 31089128 31089291 -109227474 - MER5B DNA MER1_type -13 165 2 865 215 6 0 chr10 31089416 31089588 -109227177 + FRAM SINE Alu 1 172 -4 2080 110 0 19 chr10 31089904 31090212 -109226553 + AluSx SINE Alu 1 302 -10 2331 157 96 26 chr10 31091217 31091715 -109225050 - L1MB3 LINE L1 0 6183 5651 1379 218 200 43 chr10 31091773 31091921 -109224844 - MER50 LTR ERV1 -19 715 592 1898 93 72 0 chr10 31091921 31092199 -109224566 + AluSx SINE Alu 1 298 -14 1379 218 200 43 chr10 31092199 31092660 -109224105 - MER50 LTR ERV1 -142 592 10 1832 149 0 7 chr10 31093133 31093428 -109223337 - AluJo SINE Alu -15 297 5 2147 135 28 38 chr10 31094726 31094764 -109222001 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31094764 31095070 -109221695 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31095070 31095288 -109221477 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31095288 31095628 -109221137 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31095628 31095762 -109221003 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31097347 31097652 -109219113 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31098488 31098611 -109218154 + L2 LINE L2 3167 3313 0 2385 71 3 3 chr10 31099425 31099734 -109217031 - AluSg1 SINE Alu 0 309 1 1014 191 92 97 chr10 31100370 31100836 -109215929 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31102408 31102772 -109213993 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31103090 31103169 -109213596 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31103978 31104102 -109212663 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31104102 31104393 -109212372 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31104393 31104545 -109212220 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31104757 31105216 -109211549 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31105864 31106161 -109210604 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31106690 31107007 -109209758 - AluJo SINE Alu 0 324 3 542 176 9 19 chr10 31107223 31107331 -109209434 - L1MB3 LINE L1 -8 6175 6069 202 235 118 35 chr10 31107431 31107516 -109209249 + L3 LINE CR1 1365 1456 -121 1103 113 40 17 chr10 31107521 31107698 -109209067 + MER4D LTR ERV1 1 181 -722 5365 123 12 10 chr10 31107698 31108504 -109208261 + L1PA15 LINE L1 5350 6157 -8 3360 141 65 73 chr10 31108504 31109200 -109207565 + MER4D LTR ERV1 183 872 0 3145 122 8 112 chr10 31109815 31110456 -109206309 + MER4B LTR ERV1 1 574 -36 536 237 0 52 chr10 31110894 31111029 -109205736 + L2 LINE L2 3180 3307 -6 192 307 0 67 chr10 31111034 31111109 -109205656 + L2 LINE L2 3133 3202 -70 200 182 0 0 chr10 31111936 31111969 -109204796 + CT-rich Low_complexity Low_complexity 2 34 0 354 45 0 0 chr10 31111972 31112016 -109204749 + (CA)n Simple_repeat Simple_repeat 2 45 0 2237 112 0 0 chr10 31112482 31112786 -109203979 - AluSx SINE Alu -8 304 1 218 296 57 23 chr10 31113025 31113113 -109203652 + L2 LINE L2 2954 3044 -228 1537 185 14 20 chr10 31113225 31113522 -109203243 - AluJo SINE Alu -17 295 1 393 169 60 0 chr10 31113527 31113610 -109203155 - L1PA16 LINE L1 0 6166 6079 988 160 0 11 chr10 31113700 31113881 -109202884 + AluJb SINE Alu 134 312 0 206 31 0 31 chr10 31114188 31114220 -109202545 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1971 115 4 0 chr10 31114220 31114499 -109202266 - AluSx SINE Alu -32 280 1 3729 111 23 6 chr10 31114844 31115359 -109201406 + MER1A DNA MER1_type 4 527 0 1488 152 17 52 chr10 31115703 31115992 -109200773 + AluJo SINE Alu 2 280 -32 3474 101 8 10 chr10 31117114 31117608 -109199157 - LOR1a LTR ERV1 0 497 5 1353 228 37 34 chr10 31117906 31118204 -109198561 - AluJo SINE Alu -2 300 2 2011 191 50 46 chr10 31118299 31118802 -109197963 + MLT1D LTR MaLR 1 505 0 242 238 262 0 chr10 31118956 31119040 -109197725 + L2 LINE L2 3208 3313 0 1618 170 17 17 chr10 31119085 31119374 -109197391 - AluJb SINE Alu -23 289 1 1789 121 83 78 chr10 31119617 31119816 -109196949 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 31119816 31119841 -109196924 + (TC)n Simple_repeat Simple_repeat 1 25 0 1789 121 83 78 chr10 31119841 31120014 -109196751 + THE1C LTR MaLR 204 375 0 2078 128 0 0 chr10 31120208 31120489 -109196276 + AluSx SINE Alu 1 281 -31 191 0 0 62 chr10 31120489 31120521 -109196244 + (CAAAA)n Simple_repeat Simple_repeat 1 180 0 244 360 84 27 chr10 31120523 31120784 -109195981 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 31120784 31120834 -109195931 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 31120842 31120864 -109195901 + AT_rich Low_complexity Low_complexity 1 22 0 743 168 0 0 chr10 31120919 31121038 -109195727 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 31121093 31121309 -109195456 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 31123284 31123588 -109193177 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 31123733 31124475 -109192290 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 31124648 31124943 -109191822 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 31125167 31125222 -109191543 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 31125495 31125551 -109191214 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 31125551 31125852 -109190913 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 31125852 31126446 -109190319 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 31126448 31126529 -109190236 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 31126529 31126585 -109190180 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 31127202 31127408 -109189357 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 31127595 31127908 -109188857 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 31128170 31128451 -109188314 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 31128684 31128745 -109188020 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1805 98 124 0 chr10 31129770 31130035 -109186730 + AluSx SINE Alu 5 302 0 1875 151 0 7 chr10 31130309 31130593 -109186172 - AluJo SINE Alu -30 282 1 198 0 0 0 chr10 31130621 31130643 -109186122 + (TG)n Simple_repeat Simple_repeat 2 23 0 191 303 0 15 chr10 31131182 31131248 -109185517 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 31131501 31131635 -109185130 + FLAM_C SINE Alu 1 133 0 2343 94 0 0 chr10 31132280 31132578 -109184187 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 31132861 31133135 -109183630 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 31133135 31133428 -109183337 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 31134683 31134990 -109181775 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 31135941 31135976 -109180789 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 31136176 31136243 -109180522 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 31136321 31136501 -109180264 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 31136581 31137035 -109179730 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 31137226 31137296 -109179469 + L1MB8 LINE L1 3909 3987 -2159 2057 112 41 0 chr10 31137296 31137590 -109179175 + AluSc SINE Alu 1 306 -3 898 180 4 146 chr10 31137590 31137765 -109179000 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 31137765 31137788 -109178977 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 31137788 31138367 -109178398 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 31138367 31138899 -109177866 + MLT2B3 LTR ERVL 23 554 0 4540 189 56 37 chr10 31138901 31139955 -109176810 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 31139955 31140335 -109176430 - MSTA LTR MaLR 0 428 1 761 163 23 0 chr10 31140335 31140464 -109176301 + FLAM_C SINE Alu 1 132 -1 4540 189 56 37 chr10 31140464 31141421 -109175344 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 31141426 31141458 -109175307 + (TG)n Simple_repeat Simple_repeat 2 33 0 553 284 209 48 chr10 31141484 31141815 -109174950 - L2 LINE L2 -799 2515 2239 279 0 0 0 chr10 31141815 31141846 -109174919 + (GA)n Simple_repeat Simple_repeat 2 32 0 553 284 209 48 chr10 31141846 31142159 -109174606 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 31142533 31142784 -109173981 - AluJo SINE Alu -25 287 14 2180 172 34 3 chr10 31143318 31143702 -109173063 - MSTD LTR MaLR 0 396 1 1550 172 0 69 chr10 31144290 31144609 -109172156 - AluJo SINE Alu -15 297 1 216 0 0 0 chr10 31145470 31145494 -109171271 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 31145811 31145841 -109170924 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 31146119 31146162 -109170603 + A-rich Low_complexity Low_complexity 1 43 0 414 217 104 26 chr10 31147333 31147448 -109169317 - L2 LINE L2 -2 3311 3188 2146 125 0 0 chr10 31147882 31148178 -109168587 - AluSx SINE Alu -16 296 1 686 175 0 0 chr10 31148765 31148885 -109167880 - AluSg/x SINE Alu 0 310 191 2143 123 0 7 chr10 31150480 31150773 -109165992 + AluSx SINE Alu 1 291 -21 2036 125 25 0 chr10 31150997 31151349 -109165416 - AluSx SINE Alu 0 359 1 2012 114 11 0 chr10 31151860 31152177 -109164588 - AluSq SINE Alu 0 320 1 795 131 31 15 chr10 31152210 31152340 -109164425 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 31152403 31152434 -109164331 + AT_rich Low_complexity Low_complexity 1 31 0 2248 111 10 0 chr10 31153699 31153996 -109162769 + AluSq SINE Alu 1 300 -13 2235 119 3 0 chr10 31153997 31154300 -109162465 + AluSc SINE Alu 1 304 -5 646 233 0 0 chr10 31154377 31154510 -109162255 + FLAM_A SINE Alu 6 138 -4 2235 100 0 13 chr10 31154986 31155286 -109161479 - AluSq SINE Alu -17 296 1 2056 192 54 18 chr10 31155286 31155726 -109161039 - L1MD1 LINE L1 -7 6235 5777 1016 241 98 50 chr10 31155735 31155959 -109160806 - L1MD1 LINE L1 -1185 4961 4749 2223 96 0 26 chr10 31155959 31156261 -109160504 - AluSx SINE Alu -16 296 3 1016 241 98 50 chr10 31156261 31156357 -109160408 - L1MD1 LINE L1 -1397 4749 4659 1565 186 7 24 chr10 31156357 31156676 -109160089 + AluJb SINE Alu 1 314 0 1016 241 98 50 chr10 31156676 31156773 -109159992 - L1MD1 LINE L1 -1487 4659 4522 206 121 0 0 chr10 31159085 31159118 -109157647 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 313 282 77 51 chr10 31160021 31160177 -109156588 + MER20B DNA MER1_type 5 164 -619 2304 98 0 16 chr10 31160316 31160622 -109156143 - AluSg SINE Alu -8 302 2 207 0 0 0 chr10 31160711 31160734 -109156031 + (TG)n Simple_repeat Simple_repeat 2 24 0 2298 119 0 3 chr10 31161055 31161366 -109155399 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 31161779 31162080 -109154685 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 31162080 31162213 -109154552 - AluSg SINE Alu -177 133 1 340 289 66 90 chr10 31163505 31163585 -109153180 - MIR SINE MIR 0 262 182 1615 154 41 41 chr10 31163585 31163877 -109152888 - AluJo SINE Alu -18 294 3 340 289 66 90 chr10 31163877 31164052 -109152713 - MIR SINE MIR -80 182 13 276 218 115 0 chr10 31164112 31164199 -109152566 - MER5A DNA MER1_type -84 105 9 1623 178 10 17 chr10 31167578 31167870 -109148895 - AluJo SINE Alu -22 290 1 2108 116 3 3 chr10 31168140 31168433 -109148332 - AluSq SINE Alu -20 293 1 2559 56 0 31 chr10 31168448 31168769 -109147996 - AluY SINE Alu 0 311 1 203 235 20 0 chr10 31169425 31169476 -109147289 - MIR3 SINE MIR -32 176 125 22 0 0 0 chr10 31169780 31169802 -109146963 + AT_rich Low_complexity Low_complexity 1 22 0 954 160 89 0 chr10 31169956 31170169 -109146596 - L1 LINE L1 -1593 4553 4322 4083 90 3 7 chr10 31170171 31170738 -109146027 + L1PB2 LINE L1 5586 6150 -1 2278 108 0 0 chr10 31170746 31171041 -109145724 + AluSc SINE Alu 1 295 -14 1608 183 0 4 chr10 31171079 31171347 -109145418 + AluJo SINE Alu 1 267 -45 24 0 0 0 chr10 31171363 31171387 -109145378 + AT_rich Low_complexity Low_complexity 1 24 0 236 170 0 94 chr10 31173511 31173617 -109143148 + (ACATG)n Simple_repeat Simple_repeat 4 99 0 2236 77 32 3 chr10 31173929 31174214 -109142551 + AluSx SINE Alu 1 293 -19 186 133 0 0 chr10 31174325 31174355 -109142410 + (TAA)n Simple_repeat Simple_repeat 2 31 0 26 30 0 0 chr10 31174372 31174405 -109142360 + AT_rich Low_complexity Low_complexity 1 33 0 924 128 19 6 chr10 31174714 31174870 -109141895 + L1PA16 LINE L1 6005 6162 -4 2149 146 3 0 chr10 31175131 31175440 -109141325 - AluJb SINE Alu 0 312 3 256 267 89 11 chr10 31175901 31175991 -109140774 - L2 LINE L2 -6 3266 3170 189 107 0 0 chr10 31178341 31178369 -109138396 + (TTA)n Simple_repeat Simple_repeat 2 29 0 183 184 0 0 chr10 31179022 31179060 -109137705 + CT-rich Low_complexity Low_complexity 4 41 0 243 61 0 0 chr10 31179070 31179103 -109137662 + (CA)n Simple_repeat Simple_repeat 2 34 0 417 39 0 0 chr10 31179103 31179154 -109137611 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 2635 55 0 3 chr10 31179879 31180190 -109136575 - AluY SINE Alu -1 310 1 205 191 0 32 chr10 31181748 31181811 -109134954 + GA-rich Low_complexity Low_complexity 2 62 0 30 0 0 0 chr10 31181982 31182012 -109134753 + AT_rich Low_complexity Low_complexity 1 30 0 1707 148 0 22 chr10 31182023 31182293 -109134472 - AluJo SINE Alu -23 289 26 230 326 133 0 chr10 31183611 31183709 -109133056 + MIR SINE MIR 49 159 -103 429 196 84 9 chr10 31183733 31183840 -109132925 - MER63 DNA MER1_type -273 789 675 249 281 21 30 chr10 31184209 31184375 -109132390 - MIR SINE MIR -17 191 30 2420 83 3 3 chr10 31185133 31185445 -109131320 - AluSx SINE Alu 0 312 1 477 297 70 16 chr10 31185887 31186143 -109130622 + L3 LINE CR1 1109 1378 -199 22 70 0 0 chr10 31186660 31186703 -109130062 + AT_rich Low_complexity Low_complexity 1 43 0 2132 87 61 0 chr10 31186803 31187080 -109129685 + AluY SINE Alu 1 294 -17 23 33 0 0 chr10 31187446 31187476 -109129289 + AT_rich Low_complexity Low_complexity 1 30 0 546 235 53 21 chr10 31187511 31187698 -109129067 - L1MB8 LINE L1 0 6178 5986 512 148 30 20 chr10 31188465 31188566 -109128199 + L1MC4 LINE L1 7813 7914 -128 273 138 72 58 chr10 31188899 31188992 -109127773 + (TATAA)n Simple_repeat Simple_repeat 5 102 -42 1947 157 0 3 chr10 31188992 31189279 -109127486 - AluSx SINE Alu -26 286 1 273 138 72 58 chr10 31189279 31189323 -109127442 + (TATAA)n Simple_repeat Simple_repeat 102 144 0 346 268 138 8 chr10 31189853 31189976 -109126789 + MER20B DNA MER1_type 1 139 -644 26 0 0 0 chr10 31190346 31190372 -109126393 + AT_rich Low_complexity Low_complexity 1 26 0 1925 157 0 7 chr10 31190526 31190819 -109125946 + AluJb SINE Alu 1 291 -21 204 97 0 0 chr10 31190843 31190874 -109125891 + (GGGGA)n Simple_repeat Simple_repeat 5 35 0 213 121 0 0 chr10 31191459 31191492 -109125273 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 83 0 0 chr10 31192406 31192466 -109124299 + AT_rich Low_complexity Low_complexity 1 60 0 285 75 0 0 chr10 31192570 31192610 -109124155 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 266 0 47 chr10 31192636 31192700 -109124065 + L2 LINE L2 3180 3240 -73 1587 174 10 40 chr10 31193262 31193560 -109123205 - AluJo SINE Alu -23 289 1 1097 159 11 0 chr10 31193585 31193761 -109123004 - AluJb SINE Alu 0 312 135 204 262 167 0 chr10 31193883 31193967 -109122798 + L2 LINE L2 3132 3229 -43 191 61 30 0 chr10 31194307 31194340 -109122425 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2177 98 0 7 chr10 31194342 31194627 -109122138 - AluSq SINE Alu -30 283 1 678 194 0 8 chr10 31194805 31194929 -109121836 + FLAM_C SINE Alu 1 123 -10 2241 82 0 53 chr10 31195341 31195645 -109121120 - AluSg SINE Alu -10 300 13 23 86 0 0 chr10 31195673 31195731 -109121034 + AT_rich Low_complexity Low_complexity 1 58 0 1864 164 0 22 chr10 31195783 31196095 -109120670 - AluJo SINE Alu -7 305 1 1894 150 3 20 chr10 31197462 31197768 -109118997 - AluJo SINE Alu -11 301 1 222 235 0 0 chr10 31197827 31197878 -109118887 + T-rich Low_complexity Low_complexity 1 51 0 7870 19 0 15 chr10 31197888 31198983 -109117782 - L1PA3 LINE L1 0 6155 5066 2522 87 0 0 chr10 31202040 31202349 -109114416 - AluSc SINE Alu 0 309 1 1955 129 16 19 chr10 31203141 31203450 -109113315 - AluJb SINE Alu -3 309 2 242 268 28 0 chr10 31204214 31204285 -109112480 + GA-rich Low_complexity Low_complexity 4 76 0 934 235 176 12 chr10 31204317 31204636 -109112129 + L3 LINE CR1 771 1141 -436 972 62 78 0 chr10 31204713 31204842 -109111923 + MER85 DNA T2_type 1 139 0 1655 112 42 0 chr10 31205132 31205391 -109111374 + L1MA2 LINE L1 6035 6304 0 582 181 211 0 chr10 31206466 31206599 -109110166 - L1ME2 LINE L1 0 6164 6004 304 246 94 58 chr10 31207364 31207502 -109109263 + MIR SINE MIR 44 186 -76 1523 256 93 9 chr10 31207635 31208173 -109108592 - L2 LINE L2 -434 2880 2298 1811 143 3 18 chr10 31208716 31209045 -109107720 - AluJo SINE Alu 0 325 1 1660 241 21 26 chr10 31209082 31209501 -109107264 - MER47B DNA MER2_type 0 418 2 186 71 0 0 chr10 31210785 31210813 -109105952 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 2306 108 0 3 chr10 31210989 31211296 -109105469 - AluSq SINE Alu -7 306 1 1427 151 20 0 chr10 31211503 31211748 -109105017 - L1PA15 LINE L1 -2 6163 5914 334 321 127 27 chr10 31213064 31213285 -109103480 - MIR SINE MIR 0 262 20 1740 190 3 3 chr10 31213393 31213703 -109103062 - AluJo SINE Alu -2 310 1 303 122 0 0 chr10 31214833 31214882 -109101883 + (GAA)n Simple_repeat Simple_repeat 2 50 0 674 131 0 9 chr10 31217362 31217469 -109099296 + FLAM_C SINE Alu 25 130 -13 1905 157 0 16 chr10 31217722 31218035 -109098730 - AluJo SINE Alu -4 308 1 404 317 6 19 chr10 31218526 31218687 -109098078 - L1MC5 LINE L1 -109 7852 7694 2297 82 7 0 chr10 31218721 31219003 -109097762 - AluSx SINE Alu -3 309 26 1851 165 7 0 chr10 31219176 31219467 -109097298 - AluJb SINE Alu -19 293 1 2374 76 7 10 chr10 31219895 31220199 -109096566 + AluSx SINE Alu 1 303 -9 2366 102 0 0 chr10 31220199 31220503 -109096262 + AluSc SINE Alu 1 304 -5 2369 110 0 3 chr10 31221321 31221631 -109095134 + AluSc SINE Alu 1 309 0 180 125 0 0 chr10 31222282 31222314 -109094451 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1495 137 62 0 chr10 31222316 31222554 -109094211 - AluJb SINE Alu -21 291 52 441 154 71 13 chr10 31226253 31226407 -109090358 + L1MA4A LINE L1 6055 6278 -25 2196 113 0 0 chr10 31226672 31226983 -109089782 - AluY SINE Alu 0 311 1 1741 156 0 29 chr10 31226985 31227299 -109089466 - AluJo SINE Alu -7 305 1 2099 118 0 0 chr10 31229045 31229351 -109087414 - AluSx SINE Alu -6 306 1 219 88 0 0 chr10 31229499 31229533 -109087232 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 134 3 3 chr10 31229535 31229818 -109086947 - AluSx SINE Alu -29 283 1 1837 122 3 52 chr10 31230467 31230795 -109085970 - AluJo SINE Alu 0 312 1 228 280 38 61 chr10 31231887 31232019 -109084746 + MIR SINE MIR 65 193 -69 197 187 27 107 chr10 31233119 31233194 -109083571 - MIR3 SINE MIR -30 178 110 778 136 40 0 chr10 31233249 31233374 -109083391 + AluJo SINE Alu 6 135 -177 1361 213 3 20 chr10 31233383 31233679 -109083086 + AluJo SINE Alu 1 291 -21 25 108 0 0 chr10 31233679 31233781 -109082984 + AT_rich Low_complexity Low_complexity 1 102 0 1779 96 122 4 chr10 31234365 31234636 -109082129 - AluSg1 SINE Alu -6 303 1 325 216 0 14 chr10 31237524 31237598 -109079167 - Charlie5 DNA MER1_type -27 2585 2513 1628 170 42 0 chr10 31237734 31238022 -109078743 + AluJb SINE Alu 1 300 -12 2255 99 0 3 chr10 31238054 31238358 -109078407 - AluSp SINE Alu -10 303 1 657 119 0 0 chr10 31238544 31238645 -109078120 + (TC)n Simple_repeat Simple_repeat 2 102 0 324 243 0 0 chr10 31240302 31240450 -109076315 + (TG)n Simple_repeat Simple_repeat 2 149 0 1299 186 107 25 chr10 31241750 31242067 -109074698 - MER2 DNA MER2_type 0 344 2 5796 191 23 18 chr10 31242074 31242556 -109074209 - L1MC1 LINE L1 0 6333 5855 2032 94 3 20 chr10 31242556 31242876 -109073889 - AluSq SINE Alu 0 313 9 5796 191 23 18 chr10 31242876 31244224 -109072541 - L1MC1 LINE L1 -478 5855 4491 270 164 0 0 chr10 31245216 31245271 -109071494 + (CA)n Simple_repeat Simple_repeat 2 56 0 224 284 34 11 chr10 31246430 31246518 -109070247 + CT-rich Low_complexity Low_complexity 1 90 0 889 266 46 4 chr10 31246519 31246778 -109069987 - L1MC4 LINE L1 -152 7890 7621 1513 185 10 10 chr10 31248934 31249226 -109067539 - AluJo SINE Alu -20 292 1 1988 116 3 3 chr10 31249496 31249789 -109066976 - AluSq SINE Alu -20 293 1 2275 83 0 22 chr10 31249807 31250120 -109066645 - AluSx SINE Alu -1 311 6 183 362 0 0 chr10 31251001 31251048 -109065717 - MIR SINE MIR -139 69 23 23 0 0 0 chr10 31251740 31251763 -109065002 + AT_rich Low_complexity Low_complexity 1 23 0 925 183 26 65 chr10 31253686 31253731 -109063034 + MER58A DNA MER1_type 4 49 -2371 1814 143 30 7 chr10 31253731 31254032 -109062733 - AluJo SINE Alu -4 308 1 925 183 26 65 chr10 31254032 31254215 -109062550 + MER58A DNA MER1_type 49 223 -1 256 185 15 146 chr10 31255279 31255409 -109061356 - MLT1K LTR MaLR -8 580 468 676 294 37 15 chr10 31255497 31255851 -109060914 - MLT1K LTR MaLR -174 414 21 184 339 189 16 chr10 31256444 31256766 -109059999 + L3 LINE CR1 1199 1576 -1 837 149 0 22 chr10 31257323 31257457 -109059308 - FLAM_C SINE Alu 0 133 3 1818 159 0 0 chr10 31258077 31258378 -109058387 + AluJb SINE Alu 1 301 -11 310 272 33 11 chr10 31259535 31259627 -109057138 - MIR SINE MIR -150 112 19 231 330 75 9 chr10 31261058 31261164 -109055601 + MER5B DNA MER1_type 66 178 0 23 0 0 0 chr10 31262134 31262157 -109054608 + AT_rich Low_complexity Low_complexity 1 23 0 433 264 55 31 chr10 31264376 31264539 -109052226 - MER5B DNA MER1_type 0 178 12 1805 147 0 16 chr10 31265602 31265908 -109050857 + AluJo SINE Alu 12 312 0 1197 183 39 0 chr10 31266405 31266635 -109050130 - L1MA6 LINE L1 -75 6225 5987 21 36 0 0 chr10 31266703 31266731 -109050034 + AT_rich Low_complexity Low_complexity 1 28 0 387 56 0 0 chr10 31266737 31266791 -109049974 + (CA)n Simple_repeat Simple_repeat 2 55 0 193 219 16 94 chr10 31268260 31268324 -109048441 - L2 LINE L2 0 3272 3214 376 315 27 40 chr10 31268535 31268684 -109048081 - MIR SINE MIR -107 155 9 1683 143 0 14 chr10 31268971 31269250 -109047515 - AluJb SINE Alu -1 311 37 571 219 128 16 chr10 31269341 31269528 -109047237 + MIR SINE MIR 20 227 -35 2031 102 3 10 chr10 31270762 31271055 -109045710 + AluSg SINE Alu 1 291 -19 1346 188 41 11 chr10 31271233 31271504 -109045261 + AluJo SINE Alu 14 292 -20 413 255 223 48 chr10 31272156 31272532 -109044233 + L2 LINE L2 2871 3312 -1 1808 140 0 19 chr10 31272614 31272878 -109043887 + AluJb SINE Alu 21 279 -33 459 0 0 0 chr10 31273279 31273330 -109043435 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1638 152 57 8 chr10 31273335 31273599 -109043166 - AluJo SINE Alu -35 277 1 1032 150 0 6 chr10 31275788 31275955 -109040810 - AluJb SINE Alu -3 309 144 237 200 0 0 chr10 31278801 31278846 -109037919 - L2 LINE L2 -4 3268 3224 296 309 53 0 chr10 31278943 31279037 -109037728 - L2 LINE L2 -53 3219 3121 285 98 0 0 chr10 31279259 31279300 -109037465 + (TA)n Simple_repeat Simple_repeat 1 41 0 3110 167 124 3 chr10 31279316 31279962 -109036803 + L1MB7 LINE L1 5452 6176 -8 783 212 59 6 chr10 31280213 31280383 -109036382 - AluJb SINE Alu -12 300 122 402 262 161 0 chr10 31280813 31280962 -109035803 - MIR SINE MIR -10 252 80 24 32 0 0 chr10 31281137 31281168 -109035597 + AT_rich Low_complexity Low_complexity 1 31 0 261 285 94 60 chr10 31281200 31281435 -109035330 - L1ME LINE L1 -255 5866 5624 338 201 40 7 chr10 31281612 31281761 -109035004 + (TA)n Simple_repeat Simple_repeat 1 154 0 393 291 147 26 chr10 31281764 31282145 -109034620 - L1ME LINE L1 -751 5395 4969 207 296 43 43 chr10 31282406 31282592 -109034173 - MIR SINE MIR -13 249 64 618 185 23 118 chr10 31282633 31282874 -109033891 - MLT1J LTR MaLR -206 409 110 181 180 20 40 chr10 31282953 31283003 -109033762 - MIR SINE MIR -137 71 23 1828 177 0 7 chr10 31283458 31283768 -109032997 - AluJo SINE Alu -2 310 3 2642 140 74 21 chr10 31286700 31287003 -109029762 - LOR1a LTR ERV1 -1 496 158 1713 171 24 11 chr10 31287003 31287290 -109029475 - AluJo SINE Alu -13 299 9 2642 140 74 21 chr10 31287290 31287457 -109029308 - LOR1a LTR ERV1 -339 158 1 613 309 39 0 chr10 31287594 31287801 -109028964 - MIR SINE MIR -3 259 45 1512 228 0 3 chr10 31287822 31288116 -109028649 - AluJo SINE Alu -19 293 1 25 0 0 0 chr10 31288415 31288440 -109028325 + AT_rich Low_complexity Low_complexity 1 25 0 957 172 10 44 chr10 31288606 31288810 -109027955 + AluJo SINE Alu 101 297 -15 1624 141 62 72 chr10 31288815 31289106 -109027659 + AluJo SINE Alu 1 288 -24 39 0 0 0 chr10 31289110 31289149 -109027616 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr10 31290046 31290071 -109026694 + AT_rich Low_complexity Low_complexity 1 25 0 2071 120 14 3 chr10 31290878 31291170 -109025595 + AluSx SINE Alu 1 295 -17 2362 109 0 0 chr10 31291995 31292299 -109024466 + AluSx SINE Alu 3 306 -6 1537 228 35 83 chr10 31293008 31293462 -109023303 + L1MB7 LINE L1 5668 6096 -88 1679 181 14 0 chr10 31293462 31293755 -109023010 + AluJo SINE Alu 1 297 -15 1537 228 35 83 chr10 31293755 31293817 -109022948 + L1MB7 LINE L1 6096 6159 -25 965 175 0 0 chr10 31294066 31294220 -109022545 + AluJb SINE Alu 148 301 -11 1408 211 24 10 chr10 31294536 31294834 -109021931 + AluJo SINE Alu 1 302 -10 1848 173 7 0 chr10 31295584 31295879 -109020886 + AluJb SINE Alu 1 297 -15 1887 157 7 3 chr10 31296524 31296811 -109019954 + AluJo SINE Alu 1 288 -24 1929 150 45 25 chr10 31296886 31297245 -109019520 + MLT1B LTR MaLR 22 387 -3 194 188 29 43 chr10 31297286 31297355 -109019410 - L2 LINE L2 -213 3059 2992 675 299 44 6 chr10 31300027 31300348 -109016417 - LTR16B LTR ERVL -1 463 131 1995 147 0 13 chr10 31300375 31300681 -109016084 - MER1B DNA MER1_type 0 339 38 736 270 57 5 chr10 31301440 31301651 -109015114 + MIR SINE MIR 31 252 -10 1645 186 40 15 chr10 31301696 31302024 -109014741 - MER58B DNA MER1_type 0 341 6 1335 167 22 13 chr10 31302378 31302606 -109014159 + MSTA LTR MaLR 1 230 -198 1254 204 26 0 chr10 31302622 31302852 -109013913 + MSTA LTR MaLR 191 426 0 411 250 26 0 chr10 31302913 31303029 -109013736 - MIR SINE MIR -62 200 82 3536 55 23 5 chr10 31303051 31303487 -109013278 + MLT2A1 LTR ERVL 1 444 0 2310 98 101 24 chr10 31303487 31303865 -109012900 + MER61C LTR ERV1 28 434 0 4683 158 11 66 chr10 31304430 31305386 -109011379 + MER4D LTR ERV1 1 903 0 636 83 31 10 chr10 31306062 31306158 -109010607 + MER4A LTR ERV1 1 98 -566 1839 146 6 19 chr10 31306158 31306508 -109010257 + MER4A LTR ERV1 261 664 0 274 290 0 0 chr10 31306524 31306593 -109010172 + (TA)n Simple_repeat Simple_repeat 1 69 0 2599 138 62 15 chr10 31306969 31307440 -109009325 + L1MB3 LINE L1 5684 6176 -7 234 0 0 0 chr10 31307591 31307617 -109009148 + (TA)n Simple_repeat Simple_repeat 2 27 0 1406 239 7 47 chr10 31307619 31308025 -109008740 - MLT2C1 LTR ERVL -7 390 1 225 0 0 0 chr10 31308028 31308053 -109008712 + (TA)n Simple_repeat Simple_repeat 2 26 0 339 96 0 0 chr10 31308068 31308120 -109008645 + (TG)n Simple_repeat Simple_repeat 1 52 0 591 184 208 0 chr10 31308346 31308471 -109008294 - FRAM SINE Alu -20 156 6 2008 165 72 78 chr10 31308524 31309063 -109007702 + LTR10A LTR ERV1 13 548 -61 973 201 73 29 chr10 31309072 31309345 -109007420 + LTR10A-int LTR ERV1 1 285 -6364 252 272 65 22 chr10 31309607 31309699 -109007066 + LTR10A-int LTR ERV1 975 1070 -5579 5760 85 9 47 chr10 31309707 31310855 -109005910 + HERV17 LTR ERV1 704 1719 -5177 388 202 167 0 chr10 31310858 31310942 -109005823 - LTR8 LTR ERV1 -438 253 156 1649 95 42 4 chr10 31310942 31311205 -109005560 + Harlequin LTR ERV1 1807 2079 -4817 647 149 28 0 chr10 31311205 31311312 -109005453 + MSTD LTR MaLR 287 396 0 1394 262 128 31 chr10 31311324 31311924 -109004841 - MER21B LTR ERV1 -144 787 38 611 151 0 28 chr10 31311937 31312043 -109004722 - FRAM SINE Alu -10 166 64 6963 131 22 18 chr10 31312141 31314326 -109002439 + L1MA3 LINE L1 4113 6305 0 246 327 40 25 chr10 31314399 31314601 -109002164 + HAL1 LINE L1 1513 1717 -790 28 0 0 0 chr10 31314782 31314810 -109001955 + AT_rich Low_complexity Low_complexity 1 28 0 1412 222 29 0 chr10 31315044 31315323 -109001442 + AluJo SINE Alu 1 287 -25 226 264 236 24 chr10 31315389 31315943 -109000822 + L1M4 LINE L1 2220 2891 -3255 1407 196 14 39 chr10 31316388 31316674 -109000091 + AluJo SINE Alu 1 279 -33 927 172 0 9 chr10 31316674 31316905 -108999860 + GA-rich Low_complexity Low_complexity 1 228 0 1083 91 11 11 chr10 31316997 31317173 -108999592 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 192 259 0 0 chr10 31317250 31317304 -108999461 + GA-rich Low_complexity Low_complexity 4 57 0 880 132 0 13 chr10 31317324 31317483 -108999282 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2401 53 11 0 chr10 31317793 31318078 -108998687 - AluY SINE Alu -23 288 1 1905 176 76 83 chr10 31319162 31319678 -108997087 + MLT2B3 LTR ERVL 35 546 -8 414 130 13 52 chr10 31319904 31319981 -108996784 - FLAM SINE Alu -12 131 58 3426 197 24 83 chr10 31320184 31321214 -108995551 - LTR5 LTR ERVK 0 969 1 238 294 73 9 chr10 31321603 31321614 -108995151 - MIR SINE MIR -95 167 158 1859 167 52 0 chr10 31321614 31321943 -108994822 - MER7A DNA MER2_type -1 345 2 238 294 73 9 chr10 31321943 31322040 -108994725 - MIR SINE MIR -104 158 52 553 250 42 24 chr10 31322522 31322690 -108994075 - MER5B DNA MER1_type -4 174 4 807 209 11 11 chr10 31322702 31322879 -108993886 - MER5B DNA MER1_type -1 177 1 1935 263 39 26 chr10 31323227 31323812 -108992953 + MLT1E LTR MaLR 1 593 0 201 405 8 16 chr10 31323837 31323963 -108992802 - MIR SINE MIR -64 144 20 242 0 0 0 chr10 31324130 31324157 -108992608 - L1P LINE L1 -2054 4092 4066 * 4628 10 0 0 chr10 31324156 31324668 -108992097 + L1HS LINE L1 5644 6155 0 252 0 0 0 chr10 31324673 31324701 -108992064 + (A)n Simple_repeat Simple_repeat 1 28 0 190 283 38 0 chr10 31325283 31325336 -108991429 - MIR SINE MIR -78 130 76 304 266 28 0 chr10 31327077 31327186 -108989579 - L1M2 LINE L1 -443 5857 5746 * 461 237 9 9 chr10 31327184 31327298 -108989467 - L1MA5 LINE L1 -441 5859 5746 431 246 8 23 chr10 31327296 31327426 -108989339 - L1MA6 LINE L1 -441 5859 5732 * 434 286 68 13 chr10 31327593 31327827 -108988938 + L1MEd LINE L1 811 1057 -5062 21 57 0 0 chr10 31328080 31328115 -108988650 + AT_rich Low_complexity Low_complexity 1 35 0 2283 108 16 0 chr10 31328116 31328421 -108988344 - AluSx SINE Alu -2 310 1 1063 172 0 0 chr10 31328472 31328635 -108988130 + AluJb SINE Alu 1 163 -149 478 200 0 0 chr10 31328637 31328722 -108988043 - FLAM_A SINE Alu -35 107 23 1921 223 21 13 chr10 31328729 31329199 -108987566 + L1MB4 LINE L1 4246 4719 -1427 1859 184 24 3 chr10 31329199 31329573 -108987192 + L1MB4 LINE L1 5797 6178 -2 1967 151 0 20 chr10 31330032 31330337 -108986428 + AluSx SINE Alu 1 299 -13 2182 217 93 74 chr10 31330338 31330871 -108985894 + L1MC4 LINE L1 7104 7662 -380 2208 97 0 72 chr10 31330871 31331191 -108985574 + AluSx SINE Alu 1 297 -15 2182 217 93 74 chr10 31331191 31331562 -108985203 + L1MC4 LINE L1 7662 8025 -17 24 32 0 0 chr10 31331670 31331701 -108985064 + AT_rich Low_complexity Low_complexity 1 31 0 385 271 28 9 chr10 31332104 31332211 -108984554 + L2 LINE L2 3197 3305 -8 207 300 0 0 chr10 31333187 31333247 -108983518 - L2 LINE L2 -559 2755 2696 261 98 0 0 chr10 31334074 31334115 -108982650 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1499 154 96 32 chr10 31334467 31334747 -108982018 - AluJo SINE Alu -12 300 3 259 326 121 0 chr10 31335086 31335218 -108981547 - MIR3 SINE MIR -27 181 34 740 197 0 0 chr10 31335759 31335896 -108980869 + AluJo SINE Alu 1 137 -175 1518 185 27 20 chr10 31335896 31336188 -108980577 + AluJb SINE Alu 1 294 -18 275 230 68 0 chr10 31336332 31336406 -108980359 + MER116 DNA Mariner 1 79 -1 416 35 0 17 chr10 31336795 31336853 -108979912 - L1PA7 LINE L1 -3 6151 6095 2505 71 3 0 chr10 31336957 31337266 -108979499 + AluSx SINE Alu 1 310 -2 257 154 0 0 chr10 31339050 31339089 -108977676 + L2 LINE L2 3214 3252 -20 1988 142 3 16 chr10 31339178 31339481 -108977284 + AluSx SINE Alu 1 299 -13 467 258 38 15 chr10 31339512 31339644 -108977121 + L2 LINE L2 2956 3090 -223 2638 127 52 40 chr10 31339649 31340184 -108976581 + MER57B-int LTR ERV1 1018 3648 -4168 1659 136 11 0 chr10 31340169 31340448 -108976317 - MER41-int LTR ERV1 -3342 4195 3914 * 1661 130 0 8 chr10 31340446 31340708 -108976057 - MER41-int LTR ERV1 -2435 2580 2321 753 54 0 0 chr10 31340708 31340801 -108975964 - AluYa5/8 SINE Alu -16 294 202 1697 89 4 4 chr10 31340801 31341049 -108975716 - MER41-int LTR ERV1 -2868 3078 2831 568 92 51 31 chr10 31341033 31341131 -108975634 + MER57B-int LTR ERV1 4905 5004 -2533 * 12096 117 54 9 chr10 31341130 31341994 -108974771 + MER57B-int LTR ERV1 5249 6073 -1464 2322 105 3 0 chr10 31341994 31342299 -108974466 - AluSp SINE Alu -7 306 1 12096 117 54 9 chr10 31342299 31343254 -108973511 + MER57B-int LTR ERV1 6073 7150 -387 673 141 23 31 chr10 31343254 31343382 -108973383 + LTR54B LTR ERV1 5 131 -367 1643 78 122 0 chr10 31343383 31343613 -108973152 + MER57B-int LTR ERV1 7280 7537 0 2849 128 7 2 chr10 31343613 31344042 -108972723 + MER57B LTR ERV1 1 431 -3 1580 153 4 8 chr10 31344044 31344293 -108972472 + AluJo SINE Alu 50 297 -15 24 0 0 0 chr10 31344293 31344317 -108972448 + AT_rich Low_complexity Low_complexity 1 24 0 5548 202 20 21 chr10 31344366 31345431 -108971334 - L1MC1 LINE L1 -2 6331 5267 1720 186 3 3 chr10 31345431 31345722 -108971043 - AluJb SINE Alu -20 292 2 5548 202 20 21 chr10 31345722 31346922 -108969843 - L1MC1 LINE L1 -1066 5267 4071 429 200 22 0 chr10 31346920 31347010 -108969755 - L1M4 LINE L1 -1762 4384 4293 * 1889 182 3 6 chr10 31347043 31347356 -108969409 - AluJb SINE Alu 0 312 1 1500 297 84 45 chr10 31348083 31348750 -108968015 + HERV16 LTR ERVL 1585 2277 -2719 1054 144 0 0 chr10 31348818 31348978 -108967787 + FRAM SINE Alu 5 164 -2 2264 87 0 3 chr10 31348987 31349275 -108967490 + AluY SINE Alu 18 304 -7 198 281 0 16 chr10 31349445 31349509 -108967256 - L2 LINE L2 -4 3268 3206 916 179 0 31 chr10 31349867 31350029 -108966736 - FRAM SINE Alu -19 157 1 422 228 19 95 chr10 31351047 31351154 -108965611 + MIR SINE MIR 90 183 -79 1640 182 7 13 chr10 31351154 31351456 -108965309 + AluJo SINE Alu 1 300 -12 422 228 19 95 chr10 31351456 31351506 -108965259 + MIR SINE MIR 183 235 -27 7214 188 151 19 chr10 31352054 31353605 -108963160 - MER52A LTR ERV1 0 1755 1 1833 160 0 3 chr10 31353954 31354266 -108962499 + AluJb SINE Alu 1 311 0 744 187 27 13 chr10 31354883 31355033 -108961732 + FRAM SINE Alu 4 155 -21 1189 193 166 14 chr10 31355033 31355395 -108961370 - L1MC4 LINE L1 -738 7304 6888 349 232 128 16 chr10 31355759 31355884 -108960881 - L2 LINE L2 -4 3309 3171 2713 140 20 27 chr10 31356382 31356627 -108960138 + L1PB4 LINE L1 5708 5950 -206 1854 158 32 0 chr10 31356627 31356906 -108959859 + AluJb SINE Alu 3 290 -22 2713 140 20 27 chr10 31356906 31357109 -108959656 + L1PB4 LINE L1 5950 6153 -3 24 0 0 0 chr10 31357499 31357523 -108959242 + AT_rich Low_complexity Low_complexity 1 24 0 186 71 0 0 chr10 31357574 31357602 -108959163 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 258 263 25 0 chr10 31358201 31358281 -108958484 - MIR3 SINE MIR -33 175 94 548 233 47 31 chr10 31358708 31358837 -108957928 - MER20 DNA MER1_type -36 183 53 333 47 0 0 chr10 31358893 31358936 -108957829 + (CA)n Simple_repeat Simple_repeat 2 44 0 2103 111 0 80 chr10 31358936 31359124 -108957641 - AluSx SINE Alu -13 299 146 2333 97 0 3 chr10 31359124 31359424 -108957341 - AluSx SINE Alu -13 299 1 2103 111 0 80 chr10 31359424 31359560 -108957205 - AluSx SINE Alu -166 146 1 292 342 44 13 chr10 31359574 31359732 -108957033 - MIR SINE MIR -71 191 29 217 352 9 29 chr10 31359849 31359954 -108956811 + L3b LINE CR1 1479 1581 -2 2226 114 3 0 chr10 31360723 31361020 -108955745 + AluSx SINE Alu 1 298 -14 1921 145 0 40 chr10 31361941 31362265 -108954500 - AluJb SINE Alu -1 311 1 863 141 0 0 chr10 31362267 31362395 -108954370 - AluJo/FLAM SINE Alu -179 133 6 29 84 0 0 chr10 31362592 31362663 -108954102 + AT_rich Low_complexity Low_complexity 1 71 0 201 279 31 112 chr10 31362751 31362825 -108953940 - MIR3 SINE MIR -55 153 97 2790 119 47 9 chr10 31362825 31363255 -108953510 + MER83 LTR ERV1 3 448 0 201 279 31 112 chr10 31363255 31363341 -108953424 - MIR3 SINE MIR -111 97 6 1684 283 85 16 chr10 31363680 31363913 -108952852 + L2 LINE L2 1892 2107 -1207 1199 179 92 118 chr10 31363913 31364309 -108952456 + MER4C LTR ERV1 2 386 -79 351 0 0 0 chr10 31364309 31364348 -108952417 + (TG)n Simple_repeat Simple_repeat 2 40 0 1199 179 92 118 chr10 31364348 31364427 -108952338 + MER4C LTR ERV1 386 465 0 1684 283 85 16 chr10 31364427 31365030 -108951735 + L2 LINE L2 2107 2786 -528 532 258 14 83 chr10 31365407 31365624 -108951141 + L2 LINE L2 3112 3313 0 1452 249 75 22 chr10 31365829 31366283 -108950482 + MLT1F LTR MaLR 60 537 -5 270 260 60 30 chr10 31366311 31366411 -108950354 - MIR SINE MIR -108 154 52 192 97 0 0 chr10 31367665 31367696 -108949069 + (GA)n Simple_repeat Simple_repeat 2 32 0 187 360 8 32 chr10 31368796 31368921 -108947844 - MIR3 SINE MIR -21 187 66 272 359 0 0 chr10 31369514 31369620 -108947145 + L2 LINE L2 2266 2371 -943 191 261 0 0 chr10 31369651 31369697 -108947068 + L2 LINE L2 3221 3266 -6 2781 121 91 0 chr10 31369812 31370265 -108946500 + L1PB3 LINE L1 5660 6153 -1 2120 132 0 3 chr10 31370407 31370718 -108946047 - AluSx SINE Alu -2 310 1 1892 157 0 22 chr10 31370718 31371030 -108945735 - AluJb SINE Alu -6 306 1 318 218 129 10 chr10 31371105 31371206 -108945559 - MIR SINE MIR -56 206 94 944 101 0 0 chr10 31371397 31371516 -108945249 + FLAM_C SINE Alu 1 119 -24 465 103 28 28 chr10 31371516 31371623 -108945142 + (TA)n Simple_repeat Simple_repeat 2 108 0 24 53 0 0 chr10 31371641 31371679 -108945086 + AT_rich Low_complexity Low_complexity 1 38 0 304 236 297 0 chr10 31371829 31371977 -108944788 - MIR SINE MIR -54 208 17 1224 205 95 3 chr10 31372254 31372509 -108944256 + AluJo SINE Alu 1 286 -26 360 0 0 0 chr10 31372509 31372549 -108944216 + (CA)n Simple_repeat Simple_repeat 1 40 0 1224 205 95 3 chr10 31372549 31372576 -108944189 + AluJo SINE Alu 286 309 -3 225 0 0 0 chr10 31373317 31373342 -108943423 + (TA)n Simple_repeat Simple_repeat 2 26 0 2118 130 7 0 chr10 31373693 31373986 -108942779 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr10 31374060 31374088 -108942677 + AT_rich Low_complexity Low_complexity 1 28 0 289 186 18 26 chr10 31374173 31374286 -108942479 + (TA)n Simple_repeat Simple_repeat 1 112 0 1814 161 3 0 chr10 31374286 31374572 -108942193 - AluJo SINE Alu -25 287 1 1700 208 25 11 chr10 31374615 31374980 -108941785 + MLT1A2 LTR MaLR 1 370 -4 2699 23 7 3 chr10 31375119 31375427 -108941338 - AluY SINE Alu -2 309 1 202 326 11 22 chr10 31375594 31375683 -108941082 + L2 LINE L2 3185 3272 0 340 323 46 32 chr10 31375703 31375881 -108940884 + MIR SINE MIR 5 184 -77 183 328 123 0 chr10 31377936 31378058 -108938707 - MIR SINE MIR -57 205 69 557 254 40 23 chr10 31378259 31378432 -108938333 - MIR SINE MIR -1 261 86 2298 107 0 7 chr10 31378976 31379286 -108937479 + AluSx SINE Alu 5 312 0 854 231 0 27 chr10 31380072 31380258 -108936507 + MER41D LTR ERV1 1 181 -376 6953 123 128 108 chr10 31380258 31381911 -108934854 - pTR5 LTR ERV1 -7 2431 745 1718 192 51 16 chr10 31381911 31382281 -108934484 + MER41D LTR ERV1 166 548 -9 1176 165 55 42 chr10 31382292 31382384 -108934381 - Tigger3(Golem) DNA MER2_type -2 3027 2938 2410 60 0 0 chr10 31382384 31382702 -108934063 + AluY SINE Alu 1 318 0 1176 165 55 42 chr10 31382702 31382844 -108933921 - Tigger3(Golem) DNA MER2_type -91 2938 2789 4256 53 23 5 chr10 31382855 31383458 -108933307 + Harlequin LTR ERV1 1961 2574 -4322 * 24575 110 11 16 chr10 31383457 31387018 -108929747 + Harlequin LTR ERV1 3352 6896 0 3940 42 38 0 chr10 31387018 31387490 -108929275 + LTR2B LTR ERV1 1 490 0 478 95 0 0 chr10 31387490 31387564 -108929201 + AluSc SINE Alu 236 309 0 672 219 44 15 chr10 31387564 31387701 -108929064 - Tigger3(Golem) DNA MER2_type -2888 141 1 1425 182 0 55 chr10 31387979 31388124 -108928641 + AluJo SINE Alu 1 122 -190 2115 115 21 0 chr10 31388124 31388411 -108928354 + AluSx SINE Alu 1 293 -19 1425 182 0 55 chr10 31388411 31388572 -108928193 + AluJo SINE Alu 122 290 -22 5043 154 26 20 chr10 31389307 31390221 -108926544 - MER49 LTR ERV1 -1 922 3 281 169 17 0 chr10 31390244 31390303 -108926462 + CT-rich Low_complexity Low_complexity 1 60 0 2029 137 7 3 chr10 31390303 31390602 -108926163 - AluSx SINE Alu -4 308 9 646 238 48 12 chr10 31390699 31390867 -108925898 - MER5A DNA MER1_type 0 189 16 823 259 50 27 chr10 31390872 31391169 -108925596 + LTR16A LTR ERVL 119 422 -28 3710 151 3 9 chr10 31391602 31391795 -108924970 - LTR39 LTR ERV1 0 783 591 1954 137 35 0 chr10 31391795 31392079 -108924686 + AluSx SINE Alu 2 295 -17 3710 151 3 9 chr10 31392079 31392467 -108924298 - LTR39 LTR ERV1 -192 591 205 926 70 160 26 chr10 31392468 31392624 -108924141 + L1PA8 LINE L1 5995 6171 -1 * 1803 229 47 16 chr10 31392623 31393132 -108923633 + L1ME3A LINE L1 5634 6162 -8 1569 193 58 20 chr10 31393356 31393704 -108923061 - MLT1A1 LTR MaLR -2 363 3 219 36 0 0 chr10 31393940 31393968 -108922797 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 508 255 43 43 chr10 31394414 31394598 -108922167 + MIR3 SINE MIR 4 187 -21 1469 98 229 0 chr10 31394752 31394997 -108921768 + AluSx SINE Alu 1 301 -1 1162 206 31 103 chr10 31395064 31395293 -108921472 - MLT1B LTR MaLR -3 387 200 333 0 0 0 chr10 31395293 31395330 -108921435 + (TG)n Simple_repeat Simple_repeat 2 38 0 1162 206 31 103 chr10 31395330 31395517 -108921248 - MLT1B LTR MaLR -190 200 1 1931 150 0 34 chr10 31396069 31396389 -108920376 + AluJb SINE Alu 1 309 -3 2641 241 88 20 chr10 31396798 31397117 -108919648 - L1ME3A LINE L1 -6 6164 5868 1400 135 8 45 chr10 31397117 31397361 -108919404 + MER46A DNA MER2_type 2 236 0 2641 241 88 20 chr10 31397361 31397855 -108918910 - L1ME3A LINE L1 -302 5868 5295 3267 87 93 10 chr10 31397900 31398392 -108918373 - L1PA11 LINE L1 0 6174 5642 853 150 7 21 chr10 31398418 31398558 -108918207 + AluJo SINE Alu 1 138 -174 1733 113 0 0 chr10 31398578 31398799 -108917966 - AluSg/x SINE Alu -20 290 70 308 215 0 25 chr10 31399365 31399444 -108917321 + L2 LINE L2 3163 3239 -74 300 227 31 10 chr10 31400178 31400275 -108916490 + (TA)n Simple_repeat Simple_repeat 2 100 0 261 0 0 0 chr10 31400277 31400306 -108916459 + (TG)n Simple_repeat Simple_repeat 2 30 0 2028 140 0 25 chr10 31400393 31400708 -108916057 - AluSx SINE Alu -3 309 3 207 0 0 0 chr10 31402625 31402648 -108914117 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 222 37 0 0 chr10 31404211 31404238 -108912527 + (CA)n Simple_repeat Simple_repeat 2 28 0 3652 155 38 41 chr10 31404934 31405663 -108911102 - LTR8A LTR ERV1 0 727 1 2040 173 12 46 chr10 31406013 31406423 -108910342 - MSTD LTR MaLR 0 396 1 413 296 64 54 chr10 31406775 31406978 -108909787 + MIR SINE MIR 34 238 -24 213 174 43 0 chr10 31407299 31407345 -108909420 + (TTAG)n Simple_repeat Simple_repeat 2 49 0 416 203 83 124 chr10 31408199 31408440 -108908325 - L2 LINE L2 -1 3312 3082 23 0 0 0 chr10 31408907 31408930 -108907835 + AT_rich Low_complexity Low_complexity 1 23 0 815 157 0 8 chr10 31408930 31409064 -108907701 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr10 31409571 31409592 -108907173 + AT_rich Low_complexity Low_complexity 1 21 0 1175 149 0 0 chr10 31409690 31409858 -108906907 - AluSx SINE Alu -11 299 132 13445 54 6 0 chr10 31409858 31412289 -108904476 - L1PA6 LINE L1 -2 6152 3718 5388 157 37 30 chr10 31412290 31413263 -108903502 - L1P LINE L1 -5153 993 14 753 167 71 0 chr10 31413263 31413389 -108903376 - AluSx SINE Alu -177 136 2 365 162 0 14 chr10 31413398 31413472 -108903293 + (TG)n Simple_repeat Simple_repeat 2 74 0 306 179 0 0 chr10 31413472 31413528 -108903237 + L1MC4 LINE L1 6648 6703 -1339 422 91 13 0 chr10 31413664 31413741 -108903024 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 334 347 59 6 chr10 31413838 31414008 -108902757 - MIR3 SINE MIR -5 203 25 2060 145 0 16 chr10 31414351 31414668 -108902097 + AluJb SINE Alu 1 312 0 186 319 83 0 chr10 31416156 31416228 -108900537 - L2 LINE L2 -44 3228 3151 763 132 0 0 chr10 31416363 31416477 -108900288 - L1MB3 LINE L1 -242 5941 5828 1262 202 19 0 chr10 31416494 31416751 -108900014 + L1MD3 LINE L1 7577 7838 -157 313 304 97 23 chr10 31417434 31417669 -108899096 - MIR SINE MIR -10 252 2 375 23 0 0 chr10 31418209 31418253 -108898512 + (CA)n Simple_repeat Simple_repeat 1 44 0 2123 134 3 0 chr10 31418986 31419285 -108897480 - AluSx SINE Alu -12 300 1 675 174 0 33 chr10 31419302 31419423 -108897342 - FLAM_C SINE Alu -17 126 10 183 372 16 33 chr10 31419561 31419682 -108897083 + MIR SINE MIR 26 144 -118 375 262 85 6 chr10 31421841 31422005 -108894760 + MIR SINE MIR 86 262 0 1645 132 12 103 chr10 31422752 31423071 -108893694 - AluJb SINE Alu -22 290 1 206 216 273 0 chr10 31423312 31423400 -108893365 - MIR SINE MIR 0 262 151 376 291 29 34 chr10 31423800 31423862 -108892903 + MER5B DNA MER1_type 1 62 -116 1696 164 51 7 chr10 31423862 31424155 -108892610 + AluJo SINE Alu 1 306 -6 376 291 29 34 chr10 31424155 31424267 -108892498 + MER5B DNA MER1_type 62 174 -4 401 222 8 34 chr10 31424740 31424857 -108891908 - MER5B DNA MER1_type -61 117 4 574 202 0 20 chr10 31425008 31425207 -108891558 + CT-rich Low_complexity Low_complexity 1 194 0 1378 176 42 93 chr10 31425263 31425419 -108891346 - MER96B DNA MER1_type? -5 412 250 1958 142 3 56 chr10 31425419 31425742 -108891023 + AluSq SINE Alu 1 306 -7 1378 176 42 93 chr10 31425742 31425993 -108890772 - MER96B DNA MER1_type? -167 250 26 1913 142 0 0 chr10 31426972 31427247 -108889518 + AluJo SINE Alu 1 275 -37 928 210 125 67 chr10 31427268 31427659 -108889106 + LTR37B LTR ERV1 51 464 -4 1554 145 105 14 chr10 31427832 31428108 -108888657 - AluJo SINE Alu -11 301 1 543 251 41 12 chr10 31428355 31428526 -108888239 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr10 31428886 31428909 -108887856 + AT_rich Low_complexity Low_complexity 1 23 0 231 173 0 0 chr10 31429010 31429062 -108887703 + C-rich Low_complexity Low_complexity 1 52 0 956 174 0 18 chr10 31429963 31430130 -108886635 - FRAM SINE Alu -15 161 1 362 333 104 9 chr10 31430132 31430363 -108886402 - MIR SINE MIR -2 260 8 385 293 79 45 chr10 31430706 31430907 -108885858 + L1ME4a LINE L1 5736 5950 -171 1771 174 3 19 chr10 31430907 31431223 -108885542 + AluJo SINE Alu 1 311 -1 385 293 79 45 chr10 31431223 31431287 -108885478 + L1ME4a LINE L1 5950 6010 -111 1945 138 17 3 chr10 31432061 31432351 -108884414 - AluJo SINE Alu -15 297 4 2088 103 3 23 chr10 31432362 31432697 -108884068 - AluSx SINE Alu 0 312 1 204 346 68 0 chr10 31433060 31433193 -108883572 + MIR SINE MIR 65 206 -56 1566 138 57 8 chr10 31433302 31433549 -108883216 - AluJo SINE Alu -23 289 31 285 269 67 42 chr10 31433553 31433672 -108883093 - L2 LINE L2 -11 3302 3181 1594 91 59 18 chr10 31435426 31435647 -108881118 + MER30 DNA MER1_type 1 230 0 799 185 0 0 chr10 31435787 31435906 -108880859 - FLAM_C SINE Alu -23 120 2 1886 108 73 0 chr10 31435968 31436227 -108880538 - AluSx SINE Alu -32 280 3 1881 160 3 0 chr10 31438129 31438422 -108878343 + AluJo SINE Alu 1 294 -18 2244 128 0 0 chr10 31438566 31438878 -108877887 - AluSx SINE Alu 0 312 1 1762 158 17 20 chr10 31438946 31439243 -108877522 - AluJb SINE Alu -16 296 1 258 216 0 0 chr10 31439310 31439361 -108877404 - MER117 DNA MER1_type -78 119 69 590 285 144 30 chr10 31439409 31439813 -108876952 - LTR16A LTR ERVL 0 450 1 230 0 0 32 chr10 31439879 31439910 -108876855 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 989 299 29 8 chr10 31439940 31440315 -108876450 + L1ME4a LINE L1 5495 5877 -244 273 170 0 0 chr10 31440360 31440407 -108876358 - MER3 DNA MER1_type -9 200 154 2384 176 54 45 chr10 31440413 31440771 -108875994 + L1MA9 LINE L1 5752 6105 -207 1891 149 4 0 chr10 31440771 31441046 -108875719 + AluSx SINE Alu 1 276 -36 2384 176 54 45 chr10 31441046 31441094 -108875671 + L1MA9 LINE L1 6105 6151 -161 321 26 0 0 chr10 31441094 31441132 -108875633 + (CA)n Simple_repeat Simple_repeat 1 38 0 2384 176 54 45 chr10 31441132 31441280 -108875485 + L1MA9 LINE L1 6151 6312 0 700 211 0 78 chr10 31441293 31441345 -108875420 - MER3 DNA MER1_type 4 166 112 2865 10 0 0 chr10 31441345 31441656 -108875109 - AluYa5 SINE Alu 0 311 1 700 211 0 78 chr10 31441656 31441783 -108874982 - MER3 DNA MER1_type -50 112 1 209 276 48 9 chr10 31442362 31442467 -108874298 - MIR SINE MIR -14 248 140 26 50 0 0 chr10 31442595 31442635 -108874130 + AT_rich Low_complexity Low_complexity 1 40 0 251 209 30 15 chr10 31443692 31443759 -108873006 + (TATG)n Simple_repeat Simple_repeat 3 70 0 974 111 0 22 chr10 31443864 31443999 -108872766 + FLAM_C SINE Alu 1 132 -1 2072 294 110 24 chr10 31444429 31445116 -108871649 + L1MEc LINE L1 49 676 -5720 4185 130 7 0 chr10 31445116 31445714 -108871051 + LTR43 LTR ERV1 1 602 0 2072 294 110 24 chr10 31445714 31446426 -108870339 + L1MEc LINE L1 676 1568 -4828 1786 146 24 28 chr10 31446434 31446539 -108870226 + AluJb SINE Alu 1 105 -207 2587 122 5 19 chr10 31446539 31446908 -108869857 - THE1B LTR MaLR 0 364 1 1786 146 24 28 chr10 31446908 31447089 -108869676 + AluJb SINE Alu 105 286 -26 2202 215 44 47 chr10 31447104 31447803 -108868962 + L1MEc LINE L1 1577 2273 -4123 907 207 23 0 chr10 31447836 31448010 -108868755 + MER58A DNA MER1_type 43 220 -4 1820 258 60 26 chr10 31448011 31448608 -108868157 + L1MEc LINE L1 2225 2847 -3368 3923 121 4 9 chr10 31448608 31449138 -108867627 + MER1A DNA MER1_type 1 527 0 1820 258 60 26 chr10 31449138 31449194 -108867571 + L1MEc LINE L1 2847 2900 -3315 1592 257 20 20 chr10 31449195 31449359 -108867406 - HAL1 LINE L1 -674 1833 1670 1007 332 45 22 chr10 31449359 31449868 -108866897 + LTR33 LTR ERVL 1 521 0 1592 257 20 20 chr10 31449868 31450159 -108866606 - HAL1 LINE L1 -836 1671 1378 543 195 0 0 chr10 31450168 31450255 -108866510 - Tigger7 DNA MER2_type -11 2476 2390 1464 230 0 4 chr10 31450261 31450522 -108866243 - Tigger7 DNA MER2_type -473 260 1 2667 261 95 51 chr10 31450540 31451558 -108865207 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31451558 31451579 -108865186 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2667 261 95 51 chr10 31451579 31451799 -108864966 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31451799 31452399 -108864366 - MLT1E2 LTR MaLR -1 625 3 2667 261 95 51 chr10 31452399 31452443 -108864322 - HAL1 LINE L1 -2463 44 3 534 325 45 29 chr10 31452475 31452783 -108863982 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31452866 31453188 -108863577 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31453289 31453410 -108863355 - L2 LINE L2 -1 3312 3188 201 376 58 31 chr10 31453697 31453923 -108862842 + L2 LINE L2 2822 3053 -219 2314 113 0 3 chr10 31453923 31454234 -108862531 - AluSx SINE Alu -2 310 1 1387 153 57 66 chr10 31454501 31454848 -108861917 + AluJo SINE Alu 13 356 0 2849 138 5 25 chr10 31456441 31456882 -108859883 + Tigger2a DNA MER2_type 3 434 0 2124 132 0 0 chr10 31457063 31457366 -108859399 - AluSg SINE Alu -7 303 1 869 238 47 0 chr10 31457952 31458145 -108858620 + MER58A DNA MER1_type 23 224 0 1905 167 0 6 chr10 31458206 31458518 -108858247 + AluJo SINE Alu 1 310 -2 1150 247 120 8 chr10 31459124 31459598 -108857167 - Charlie7 DNA MER1_type 0 2612 2086 630 239 174 13 chr10 31459598 31459828 -108856937 - L1MC/D LINE L1 -1990 5818 5552 350 313 20 0 chr10 31459842 31459992 -108856773 - L1MC/D LINE L1 -2318 5490 5338 7436 214 94 57 chr10 31460111 31462846 -108853919 + L1MC3 LINE L1 4283 7240 -545 408 229 36 0 chr10 31462846 31462929 -108853836 + MLT1F1 LTR MaLR 45 130 -437 7436 214 94 57 chr10 31462929 31463478 -108853287 + L1MC3 LINE L1 7240 7767 -18 784 246 87 4 chr10 31463479 31463731 -108853034 - Charlie7 DNA MER1_type -898 1714 1442 1068 190 41 37 chr10 31464097 31464366 -108852399 - L1MB5 LINE L1 -1 6173 5904 507 263 62 39 chr10 31464372 31464551 -108852214 + MER5A DNA MER1_type 1 183 -6 1186 203 60 56 chr10 31465754 31466020 -108850745 + AluJo SINE Alu 1 267 -45 21 36 0 0 chr10 31466041 31466069 -108850696 + AT_rich Low_complexity Low_complexity 1 28 0 233 259 17 0 chr10 31466231 31466289 -108850476 + MIR SINE MIR 203 261 -1 225 180 0 0 chr10 31466964 31467014 -108849751 + (TG)n Simple_repeat Simple_repeat 1 50 0 201 224 20 41 chr10 31467804 31467853 -108848912 - MIR3 SINE MIR -51 157 110 2508 149 45 12 chr10 31468226 31468452 -108848313 - Tigger2 DNA MER2_type 0 2718 2501 1942 156 13 3 chr10 31468452 31468759 -108848006 + AluJb SINE Alu 1 310 -2 2508 149 45 12 chr10 31468759 31468955 -108847810 - Tigger2 DNA MER2_type -217 2501 2282 359 209 0 0 chr10 31468957 31469024 -108847741 - Tigger2 DNA MER2_type -2651 67 1 4124 98 11 21 chr10 31471465 31471650 -108845115 + MER41A LTR ERV1 1 186 -368 2383 96 0 3 chr10 31471650 31471963 -108844802 + AluSx SINE Alu 1 312 0 4124 98 11 21 chr10 31471963 31472337 -108844428 + MER41A LTR ERV1 186 554 0 260 363 14 14 chr10 31472478 31472624 -108844141 + MER5A DNA MER1_type 7 152 -37 2269 65 0 21 chr10 31472751 31473068 -108843697 - AluY SINE Alu 0 311 1 2094 132 3 0 chr10 31473233 31473528 -108843237 + AluSx SINE Alu 1 296 -16 28 0 0 0 chr10 31473629 31473657 -108843108 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 31473897 31473920 -108842845 + AT_rich Low_complexity Low_complexity 1 23 0 1136 197 94 23 chr10 31474106 31474572 -108842193 + MLT1E LTR MaLR 1 593 0 450 275 60 71 chr10 31474594 31475040 -108841725 - L1MEd LINE L1 -1032 1458 924 213 39 0 0 chr10 31475181 31475207 -108841558 + (TG)n Simple_repeat Simple_repeat 1 26 0 1931 173 76 6 chr10 31475840 31476181 -108840584 - MLT1A1 LTR MaLR 0 365 1 490 339 39 26 chr10 31476499 31476729 -108840036 + MIR SINE MIR 30 262 0 1681 245 60 23 chr10 31476830 31477311 -108839454 + MLT2B1 LTR ERVL 3 501 -19 300 50 25 0 chr10 31477333 31477373 -108839392 + MLT2B1 LTR ERVL 469 509 -6 2410 80 0 3 chr10 31479154 31479456 -108837309 - AluSg SINE Alu -9 301 1 1889 163 3 0 chr10 31479543 31479837 -108836928 + AluJo SINE Alu 1 295 -17 210 91 0 0 chr10 31480973 31481006 -108835759 + (CA)n Simple_repeat Simple_repeat 2 34 0 2227 92 3 3 chr10 31481639 31481922 -108834843 - AluSp SINE Alu -30 283 1 2250 108 0 0 chr10 31481922 31482218 -108834547 - AluSg1 SINE Alu -13 296 1 2684 55 3 0 chr10 31482760 31483090 -108833675 - L1PA13 LINE L1 -18 6145 5815 1274 109 0 0 chr10 31483095 31483260 -108833505 - AluSg/x SINE Alu -21 291 127 2300 112 0 0 chr10 31483262 31483574 -108833191 - AluSx SINE Alu 0 312 1 2242 83 13 0 chr10 31483576 31483877 -108832888 - L1PA12 LINE L1 -340 5828 5524 203 336 71 9 chr10 31484114 31484227 -108832538 + L2 LINE L2 3148 3267 -5 547 146 22 29 chr10 31484558 31484695 -108832070 + CT-rich Low_complexity Low_complexity 4 139 0 1029 104 0 33 chr10 31484781 31484964 -108831801 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1708 162 59 4 chr10 31485982 31486254 -108830511 + AluJo SINE Alu 1 287 -25 1765 146 79 0 chr10 31486858 31487125 -108829640 - AluJo SINE Alu -24 288 1 2332 103 0 0 chr10 31487142 31487444 -108829321 + AluSg SINE Alu 1 302 -8 256 343 0 0 chr10 31487450 31487523 -108829242 - L2 LINE L2 -32 3240 3168 597 237 51 32 chr10 31487542 31487795 -108828970 - L1ME4a LINE L1 -210 5911 5654 319 252 59 115 chr10 31488724 31488856 -108827909 - L1ME4a LINE L1 -568 5553 5415 1613 190 3 14 chr10 31488856 31489140 -108827625 - AluJo SINE Alu -30 282 2 319 252 59 115 chr10 31489140 31489256 -108827509 - L1ME4a LINE L1 -706 5415 5294 230 0 33 0 chr10 31489256 31489286 -108827479 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 396 0 0 0 chr10 31489285 31489329 -108827436 + (TG)n Simple_repeat Simple_repeat 1 44 0 319 252 59 115 chr10 31489286 31489349 -108827416 - L1ME4a LINE L1 -826 5295 5299 349 318 105 14 chr10 31489446 31489742 -108827023 - L1ME4a LINE L1 -1083 5063 4741 182 37 37 0 chr10 31491381 31491408 -108825357 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 718 154 39 23 chr10 31492785 31492915 -108823850 - FLAM_C SINE Alu -10 133 2 212 196 0 22 chr10 31493481 31493527 -108823238 + CT-rich Low_complexity Low_complexity 3 47 0 751 161 9 34 chr10 31493581 31493811 -108822954 + CT-rich Low_complexity Low_complexity 1 224 0 1675 209 0 0 chr10 31495302 31495584 -108821181 - AluJo SINE Alu -30 282 1 196 229 29 29 chr10 31496322 31496392 -108820373 - L3 LINE CR1 -3 1574 1505 2425 140 56 12 chr10 31497875 31498283 -108818482 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr10 31498979 31499000 -108817765 + AT_rich Low_complexity Low_complexity 1 21 0 2284 100 0 0 chr10 31499074 31499365 -108817400 - AluSx SINE Alu -21 291 1 1475 107 0 15 chr10 31499947 31500153 -108816612 - AluSg/x SINE Alu -11 299 97 790 245 169 8 chr10 31500837 31501146 -108815619 + L1ME2 LINE L1 5681 6052 -112 289 97 0 0 chr10 31501150 31501201 -108815564 + FLAM_A SINE Alu 84 119 -14 245 178 46 11 chr10 31501203 31501377 -108815388 + (TA)n Simple_repeat Simple_repeat 1 180 0 1489 234 3 3 chr10 31501397 31501683 -108815082 - AluJo SINE Alu -26 286 1 232 231 205 0 chr10 31501683 31501761 -108815004 + L1ME3 LINE L1 6039 6132 -30 282 238 42 7 chr10 31501765 31501937 -108814828 + (TA)n Simple_repeat Simple_repeat 1 178 0 190 286 0 0 chr10 31501970 31502019 -108814746 - MIR SINE MIR -7 255 207 180 0 0 0 chr10 31504354 31504374 -108812391 + (T)n Simple_repeat Simple_repeat 1 20 0 1035 159 13 94 chr10 31504839 31505072 -108811693 - MER20 DNA MER1_type -2 217 4 213 200 0 0 chr10 31505567 31505612 -108811153 + G-rich Low_complexity Low_complexity 1 45 0 251 91 0 0 chr10 31505961 31505994 -108810771 + (TTCCC)n Simple_repeat Simple_repeat 4 36 0 485 167 56 19 chr10 31505994 31506156 -108810609 + CT-rich Low_complexity Low_complexity 1 168 0 479 189 0 21 chr10 31506156 31506251 -108810514 - AluJ/FRAM SINE Alu -3 309 217 683 171 8 0 chr10 31506280 31506397 -108810368 - FLAM_C SINE Alu -15 118 1 323 227 21 31 chr10 31508115 31508212 -108808553 + MIR SINE MIR 6 101 -161 1026 165 24 0 chr10 31508226 31508390 -108808375 - FRAM SINE Alu -16 160 1 188 340 106 0 chr10 31508402 31508496 -108808269 + MIR SINE MIR 144 247 -15 564 148 0 137 chr10 31509381 31509564 -108807201 - Charlie5 DNA MER1_type -84 2528 2371 2331 98 0 9 chr10 31510873 31511188 -108805577 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr10 31511294 31511321 -108805444 + AT_rich Low_complexity Low_complexity 1 27 0 327 298 10 10 chr10 31511725 31511846 -108804919 + MIR SINE MIR 32 153 -55 320 348 130 0 chr10 31511846 31512076 -108804689 + MIR SINE MIR 3 262 0 2118 122 10 26 chr10 31512091 31512403 -108804362 - AluSx SINE Alu -5 307 1 236 75 0 25 chr10 31512787 31512827 -108803938 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2216 118 7 0 chr10 31513170 31513467 -108803298 - AluSg SINE Alu -11 299 1 2206 124 0 9 chr10 31513672 31513987 -108802778 - AluSx SINE Alu 0 312 1 378 236 231 36 chr10 31514473 31514668 -108802097 - L1MC/D LINE L1 -497 5624 5521 1639 175 0 22 chr10 31515185 31515499 -108801266 - AluJo SINE Alu 0 312 6 497 213 0 0 chr10 31515533 31515613 -108801152 - AluJ/FLAM SINE Alu -230 82 3 262 271 0 0 chr10 31516567 31516626 -108800139 - L2 LINE L2 -9 3263 3205 288 335 150 21 chr10 31517168 31517502 -108799263 - L2 LINE L2 -1001 2313 1937 180 0 0 0 chr10 31517719 31517739 -108799026 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 940 114 0 66 chr10 31519892 31520059 -108796706 + AluJb SINE Alu 154 309 -3 180 0 0 0 chr10 31520180 31520200 -108796565 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2050 141 79 50 chr10 31520362 31520781 -108795984 + MSTB1 LTR MaLR 2 432 0 319 308 22 75 chr10 31522682 31522909 -108793856 - MIR SINE MIR -25 237 23 1748 199 0 6 chr10 31524689 31525001 -108791764 - AluJb SINE Alu -2 310 1 206 310 26 9 chr10 31525482 31525598 -108791167 - L2 LINE L2 -638 2676 2559 677 219 71 120 chr10 31525883 31526208 -108790557 + L1MD2 LINE L1 5869 6177 -182 1206 164 220 12 chr10 31526220 31526470 -108790295 - AluJb SINE Alu 0 302 1 1298 169 12 0 chr10 31526830 31527072 -108789693 + L1MB4 LINE L1 5935 6179 -1 2494 125 117 5 chr10 31527639 31528024 -108788741 - MSTA LTR MaLR 0 428 1 675 253 66 48 chr10 31528614 31528887 -108787878 - L1ME4a LINE L1 -242 5879 5602 210 255 184 31 chr10 31530123 31530221 -108786544 + L2 LINE L2 3190 3302 -11 838 288 9 4 chr10 31530276 31530509 -108786256 - MIR SINE MIR 0 262 29 21 0 0 0 chr10 31530754 31530775 -108785990 + AT_rich Low_complexity Low_complexity 1 21 0 201 318 0 0 chr10 31530799 31530862 -108785903 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1295 271 61 76 chr10 31530862 31531170 -108785595 - L1MC4 LINE L1 -128 7914 7603 1536 101 128 130 chr10 31531170 31531546 -108785219 - THE1C LTR MaLR 0 375 1 1295 271 61 76 chr10 31531546 31531975 -108784790 - L1MC4 LINE L1 -439 7603 7188 948 133 95 0 chr10 31532598 31532756 -108784009 + FRAM SINE Alu 1 172 -4 2284 86 0 7 chr10 31533946 31534247 -108782518 - AluY SINE Alu -12 299 1 227 277 102 106 chr10 31534517 31534752 -108782013 - L2 LINE L2 -36 3236 3003 1595 179 69 135 chr10 31534766 31535301 -108781464 - MLT2B1 LTR ERVL 0 520 21 186 143 0 0 chr10 31535393 31535428 -108781337 + (CA)n Simple_repeat Simple_repeat 2 36 0 674 280 75 10 chr10 31536076 31536276 -108780489 - MIR SINE MIR -4 258 46 408 156 0 0 chr10 31536284 31536348 -108780417 + AluS SINE Alu 229 292 -18 1395 232 14 0 chr10 31536372 31536661 -108780104 + AluJb SINE Alu 1 293 -19 242 279 59 0 chr10 31536694 31536762 -108780003 + MIR SINE MIR 34 105 -157 24 0 0 0 chr10 31537148 31537172 -108779593 + AT_rich Low_complexity Low_complexity 1 24 0 360 289 12 52 chr10 31537700 31537789 -108778976 - MIR SINE MIR -17 245 165 2459 231 72 4 chr10 31537789 31538303 -108778462 - MLT1H LTR MaLR 0 549 1 360 289 12 52 chr10 31538303 31538386 -108778379 - MIR SINE MIR -97 165 80 338 165 113 30 chr10 31539075 31539208 -108777557 + L1ME4a LINE L1 5976 6119 -2 185 259 74 0 chr10 31539722 31539776 -108776989 - L3 LINE CR1 -138 1439 1382 327 349 41 30 chr10 31539890 31540059 -108776706 + L2 LINE L2 3102 3272 0 213 39 0 0 chr10 31540607 31540633 -108776132 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1835 148 21 0 chr10 31540637 31540920 -108775845 - AluJo SINE Alu -23 289 1 655 305 162 11 chr10 31541359 31541730 -108775035 - L3 LINE CR1 -72 1505 1079 1409 195 3 78 chr10 31542348 31542682 -108774083 + AluJo SINE Alu 1 309 -3 217 331 73 53 chr10 31543971 31544122 -108772643 + MIR3 SINE MIR 32 185 -23 379 169 0 0 chr10 31544238 31544297 -108772468 + polypyrimidine Low_complexity Low_complexity 2 60 0 666 209 6 16 chr10 31544298 31544480 -108772285 + CT-rich Low_complexity Low_complexity 1 180 0 1437 213 30 16 chr10 31544483 31544788 -108771977 - AluJo SINE Alu -3 309 1 228 205 31 58 chr10 31545868 31545950 -108770815 - MIR SINE MIR -66 142 61 679 134 0 9 chr10 31546712 31546824 -108769941 + FLAM_C SINE Alu 32 142 -1 236 134 60 90 chr10 31546874 31546941 -108769824 + L1MC4 LINE L1 7923 7987 -55 449 202 64 0 chr10 31546949 31547043 -108769722 - MLT1B LTR MaLR 0 390 291 823 181 7 40 chr10 31547187 31547336 -108769429 + FRAM SINE Alu 1 144 -32 1933 162 27 15 chr10 31548616 31548949 -108767816 - MER44D DNA MER2_type -1 608 2 1225 236 18 60 chr10 31548956 31549078 -108767687 - MLT1A2 LTR MaLR -2 372 246 1881 141 0 72 chr10 31549078 31549412 -108767353 - AluJo SINE Alu -2 310 1 1225 236 18 60 chr10 31549412 31549674 -108767091 - MLT1A2 LTR MaLR -128 246 4 234 186 47 81 chr10 31550536 31550622 -108766143 - MIR SINE MIR -52 210 128 423 346 6 19 chr10 31551559 31551715 -108765050 + MIR3 SINE MIR 52 205 -3 2007 221 10 25 chr10 31552487 31552889 -108763876 - MSTD LTR MaLR 0 396 1 182 300 0 62 chr10 31553000 31553080 -108763685 + MIR SINE MIR 80 154 -108 801 180 4 132 chr10 31553239 31553467 -108763298 + MER20 DNA MER1_type 2 200 -19 2399 84 0 13 chr10 31553556 31553865 -108762900 - AluSg SINE Alu -5 305 1 1415 158 57 4 chr10 31553880 31554126 -108762639 - AluJo SINE Alu -30 282 24 904 231 160 12 chr10 31554303 31554794 -108761971 + LTR50 LTR ERVL 52 731 -64 1590 205 3 3 chr10 31554794 31555082 -108761683 - AluJo SINE Alu -24 288 1 904 231 160 12 chr10 31555082 31555159 -108761606 + LTR50 LTR ERVL 731 795 0 228 167 0 0 chr10 31555613 31555661 -108761104 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 29 0 0 chr10 31555843 31555877 -108760888 + AT_rich Low_complexity Low_complexity 1 34 0 219 170 0 0 chr10 31556873 31556920 -108759845 + (TG)n Simple_repeat Simple_repeat 1 47 0 578 174 35 0 chr10 31557019 31557134 -108759631 + L1M4 LINE L1 4145 4263 -1883 1072 208 51 55 chr10 31557625 31557844 -108758921 + MLT1A1 LTR MaLR 1 219 -146 1482 188 0 8 chr10 31557844 31558099 -108758666 + AluJo SINE Alu 35 287 -25 215 31 31 0 chr10 31558104 31558136 -108758629 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1072 208 51 55 chr10 31558136 31558343 -108758422 + MLT1A1 LTR MaLR 223 365 0 22 35 0 0 chr10 31558960 31558989 -108757776 + AT_rich Low_complexity Low_complexity 1 29 0 2334 153 9 3 chr10 31559020 31559366 -108757399 - MER7A DNA MER2_type 0 346 1 193 343 157 10 chr10 31559387 31559489 -108757276 - MIR SINE MIR -76 132 16 667 254 30 12 chr10 31559976 31560145 -108756620 - MER5B DNA MER1_type -4 174 3 900 210 11 6 chr10 31560159 31560335 -108756430 - MER5B DNA MER1_type -1 177 1 307 299 287 0 chr10 31560663 31560830 -108755935 - MIR SINE MIR 0 262 48 360 58 29 43 chr10 31562265 31562334 -108754431 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 2899 130 7 31 chr10 31562446 31562891 -108753874 + MER57B LTR ERV1 1 434 0 384 40 0 0 chr10 31563644 31563694 -108753071 + (CA)n Simple_repeat Simple_repeat 2 51 0 34 42 0 0 chr10 31563882 31563930 -108752835 + AT_rich Low_complexity Low_complexity 1 48 0 713 272 58 73 chr10 31564030 31564494 -108752271 + LTR16A LTR ERVL 1 450 0 3861 153 14 16 chr10 31564671 31565306 -108751459 + L1PA16 LINE L1 5520 6153 -13 32 0 0 0 chr10 31565893 31565925 -108750840 + AT_rich Low_complexity Low_complexity 1 32 0 1743 177 3 25 chr10 31566547 31566863 -108749902 + AluJo SINE Alu 1 309 -3 224 254 51 0 chr10 31567272 31567331 -108749434 + L2 LINE L2 3211 3272 0 562 167 0 67 chr10 31567359 31567479 -108749286 + FLAM_C SINE Alu 2 113 -30 3844 125 12 4 chr10 31568486 31569048 -108747717 - L1PB3 LINE L1 -3 6151 5585 455 340 34 10 chr10 31569053 31569259 -108747506 - MIR SINE MIR -50 212 2 439 322 20 7 chr10 31570718 31570864 -108745901 - MIR SINE MIR -97 165 18 26 50 0 0 chr10 31570889 31570929 -108745836 + AT_rich Low_complexity Low_complexity 1 40 0 3918 88 27 8 chr10 31570945 31571471 -108745294 - L1PA10 LINE L1 -1 6167 5632 277 299 35 0 chr10 31571730 31571817 -108744948 + MIR SINE MIR 67 156 -106 320 125 4 2 chr10 31571817 31572073 -108744692 + AluSx SINE Alu 1 298 -2 205 364 45 0 chr10 31572603 31572691 -108744074 + MIR SINE MIR 81 172 -90 2264 103 3 0 chr10 31572747 31573047 -108743718 + AluSx SINE Alu 1 301 -11 248 267 221 0 chr10 31573100 31573186 -108743579 + L2 LINE L2 3166 3270 -2 1854 121 452 11 chr10 31573306 31573746 -108743019 + MER51A LTR ERV1 1 634 0 596 135 31 0 chr10 31573887 31573983 -108742782 - L1MD1 LINE L1 0 6242 6144 1718 196 3 3 chr10 31573985 31574307 -108742458 - L1MD1 LINE L1 -267 5975 5654 267 217 116 14 chr10 31574307 31574376 -108742389 + MLT1J1 LTR MaLR 347 422 -24 539 153 73 56 chr10 31574508 31574660 -108742105 - MIR SINE MIR -2 260 103 1695 151 15 11 chr10 31574697 31574968 -108741797 + THE1B LTR MaLR 93 364 0 300 194 21 21 chr10 31574968 31575061 -108741704 - L1MCc LINE L1 -5058 2064 1972 6607 131 70 37 chr10 31575067 31575786 -108740979 + Tigger3b DNA MER2_type 2 777 -2251 4498 112 41 2 chr10 31575786 31576402 -108740363 + LTR9B LTR ERV1 5 644 0 6607 131 70 37 chr10 31576402 31576872 -108739893 + Tigger3b DNA MER2_type 777 1230 -1 2477 75 0 7 chr10 31576893 31577201 -108739564 + AluY SINE Alu 1 306 -5 273 266 0 0 chr10 31577239 31577303 -108739462 + CT-rich Low_complexity Low_complexity 1 64 0 758 261 70 40 chr10 31577309 31577581 -108739184 - L1M4 LINE L1 -2076 4070 3791 2049 263 97 13 chr10 31577581 31578128 -108738637 + MLT1E LTR MaLR 1 593 0 1135 272 262 15 chr10 31578135 31578613 -108738152 + MLT1E-int LTR MaLR 9 627 -744 643 283 21 16 chr10 31578815 31579006 -108737759 + MLT1E-int LTR MaLR 692 883 -488 935 235 77 98 chr10 31579117 31579534 -108737231 + MLT1E-int LTR MaLR 964 1371 0 1041 278 35 82 chr10 31579542 31579751 -108737014 + MLT1E LTR MaLR 37 219 -374 2271 136 0 0 chr10 31579751 31580061 -108736704 + AluSx SINE Alu 1 310 -2 1041 278 35 82 chr10 31580061 31580254 -108736511 + MLT1E LTR MaLR 219 420 -173 821 201 23 23 chr10 31580264 31580438 -108736327 + MLT1E LTR MaLR 1 174 -331 4589 274 67 30 chr10 31580441 31581856 -108734909 - L1MEc LINE L1 -4317 2079 569 1647 204 73 14 chr10 31581856 31582224 -108734541 + MLT1B LTR MaLR 1 390 0 4589 274 67 30 chr10 31582224 31582776 -108733989 - L1MEc LINE L1 -5827 569 39 748 284 69 8 chr10 31582778 31583185 -108733580 - L1MCc LINE L1 -4887 1536 1129 377 344 13 7 chr10 31583589 31583740 -108733025 - L1MCc LINE L1 -6009 414 263 191 294 0 0 chr10 31583987 31584038 -108732727 - L3 LINE CR1 -3 1574 1524 200 203 0 54 chr10 31584395 31584469 -108732296 + T-rich Low_complexity Low_complexity 2 71 0 851 134 0 15 chr10 31584627 31584761 -108732004 + AluSg/x SINE Alu 178 309 -1 340 330 106 37 chr10 31584805 31585023 -108731742 - MIR SINE MIR -7 255 23 4142 102 86 3 chr10 31585261 31585856 -108730909 + LTR9B LTR ERV1 1 644 0 663 207 67 16 chr10 31585960 31586153 -108730612 + L1ME2 LINE L1 5953 6155 -9 246 81 0 0 chr10 31586157 31586194 -108730571 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1483 196 7 18 chr10 31586197 31586473 -108730292 - AluJo SINE Alu -30 282 10 387 0 0 0 chr10 31586493 31586536 -108730229 + (CA)n Simple_repeat Simple_repeat 2 44 0 2224 105 0 0 chr10 31586544 31586830 -108729935 - AluSc SINE Alu -23 286 1 443 159 30 50 chr10 31588051 31588189 -108728576 + MER51A LTR ERV1 1 136 -241 288 105 0 53 chr10 31588203 31588260 -108728505 + MER51B LTR ERV1 109 162 -215 * 1722 121 40 62 chr10 31588252 31588350 -108728415 + MER51B LTR ERV1 63 162 -215 2088 121 7 0 chr10 31588350 31588647 -108728118 + AluSx SINE Alu 1 299 -13 1722 121 40 62 chr10 31588647 31588870 -108727895 + MER51B LTR ERV1 162 377 0 261 83 0 0 chr10 31589118 31589154 -108727611 + (T)n Simple_repeat Simple_repeat 1 36 0 182 327 0 0 chr10 31591312 31591364 -108725401 + MIR3 SINE MIR 151 202 -6 1876 137 0 34 chr10 31591397 31591690 -108725075 + AluSq SINE Alu 1 283 -30 2138 98 3 0 chr10 31592884 31593171 -108723594 + AluSq SINE Alu 23 310 -3 546 256 83 24 chr10 31593290 31593458 -108723307 + MIR SINE MIR 11 188 -74 409 240 10 30 chr10 31593882 31593982 -108722783 + MER5A DNA MER1_type 9 106 -83 1524 198 35 35 chr10 31594015 31594383 -108722382 + MLT1A2 LTR MaLR 7 374 0 390 74 0 0 chr10 31594413 31594467 -108722298 - MADE1 DNA Mariner -26 54 1 417 186 93 0 chr10 31595945 31596042 -108720723 + MER5A DNA MER1_type 4 109 -80 482 117 0 0 chr10 31596069 31596129 -108720636 + AluJ/FRAM SINE Alu 226 285 -27 323 320 51 115 chr10 31597081 31597315 -108719450 + MIR SINE MIR 19 237 -25 2128 130 0 0 chr10 31598429 31598729 -108718036 + AluSx SINE Alu 1 300 -12 615 339 77 57 chr10 31599250 31599603 -108717162 + L3 LINE CR1 227 594 -983 2162 119 0 7 chr10 31599603 31599898 -108716867 - AluSq SINE Alu -18 295 3 615 339 77 57 chr10 31599898 31600051 -108716714 + L3 LINE CR1 594 743 -834 750 233 31 13 chr10 31600679 31600838 -108715927 + FRAM SINE Alu 3 164 -2 271 243 54 0 chr10 31600948 31601022 -108715743 + L2 LINE L2 2897 2974 -298 1486 184 4 23 chr10 31601389 31601650 -108715115 + AluJo SINE Alu 1 256 -56 247 318 97 45 chr10 31601951 31602105 -108714660 + MIR3 SINE MIR 40 201 -7 2596 80 18 108 chr10 31602247 31602647 -108714118 - THE1B LTR MaLR 0 364 1 2443 67 0 3 chr10 31602915 31603213 -108713552 + AluY SINE Alu 1 297 -14 180 286 191 12 chr10 31603218 31603302 -108713463 - L2 LINE L2 -22 3250 3152 480 258 100 57 chr10 31603618 31603817 -108712948 + MIR SINE MIR 32 250 -12 324 259 124 45 chr10 31603973 31604351 -108712414 - LTR33 LTR ERVL -19 502 24 3770 127 79 99 chr10 31604576 31605377 -108711388 - LTR1 LTR ERV1 0 785 1 1928 129 0 4 chr10 31606894 31607165 -108709600 + AluSx SINE Alu 12 281 -31 22 0 0 0 chr10 31608620 31608642 -108708123 + AT_rich Low_complexity Low_complexity 1 22 0 1743 184 0 0 chr10 31608827 31609135 -108707630 + AluJo SINE Alu 1 308 0 23 33 0 0 chr10 31610255 31610285 -108706480 + AT_rich Low_complexity Low_complexity 1 30 0 241 259 138 16 chr10 31610350 31610444 -108706321 + MIR SINE MIR 98 200 -62 1038 223 105 119 chr10 31610704 31611125 -108705640 + MLT1G LTR MaLR 12 424 -166 1945 132 0 3 chr10 31611125 31611421 -108705344 + L1MA6 LINE L1 6006 6300 0 1038 223 105 119 chr10 31611421 31611578 -108705187 + MLT1G LTR MaLR 424 582 -8 196 380 0 14 chr10 31611731 31611802 -108704963 + MIR SINE MIR 28 97 -165 282 282 0 0 chr10 31612034 31612105 -108704660 + MIR SINE MIR 172 242 -20 1860 149 7 19 chr10 31612895 31613203 -108703562 - AluJo SINE Alu -8 304 1 437 222 254 22 chr10 31613537 31613722 -108703043 + MIR SINE MIR 30 257 -5 231 331 92 35 chr10 31613728 31613870 -108702895 - MIR SINE MIR -95 167 18 2017 130 0 3 chr10 31613979 31614292 -108702473 + AluSx SINE Alu 1 312 0 240 163 0 0 chr10 31614541 31614584 -108702181 + A-rich Low_complexity Low_complexity 1 43 0 2172 130 0 0 chr10 31616709 31617008 -108699757 + AluSx SINE Alu 1 299 -13 1472 103 121 52 chr10 31617749 31618021 -108698744 + AluSx SINE Alu 1 291 -21 1454 194 3 35 chr10 31618506 31618789 -108697976 + AluJo SINE Alu 33 306 -6 1710 139 161 60 chr10 31619308 31619363 -108697402 - MER4A LTR ERV1 0 664 616 2421 106 0 0 chr10 31619363 31619675 -108697090 + AluSx SINE Alu 1 312 0 1710 139 161 60 chr10 31619675 31619985 -108696780 - MER4A LTR ERV1 -48 616 262 561 96 32 21 chr10 31619988 31620082 -108696683 - MER4A LTR ERV1 -569 95 1 322 194 9 9 chr10 31620947 31621055 -108695710 + GA-rich Low_complexity Low_complexity 1 108 0 352 283 158 26 chr10 31621236 31621388 -108695377 - MER5A DNA MER1_type 0 189 18 2371 86 6 13 chr10 31621536 31621850 -108694915 - AluSx SINE Alu 0 312 1 1507 178 48 7 chr10 31621876 31622247 -108694518 + AluJo SINE Alu 2 383 0 2467 63 7 0 chr10 31622333 31622635 -108694130 + AluY SINE Alu 1 304 -7 220 258 24 97 chr10 31622979 31623103 -108693662 - MIR SINE MIR -64 144 30 1715 168 40 23 chr10 31623423 31623727 -108693038 - AluJo SINE Alu -3 309 1 476 259 0 30 chr10 31623727 31623858 -108692907 - MIR SINE MIR -38 224 98 1389 277 138 31 chr10 31623869 31623925 -108692840 - MLT1G1 LTR MaLR -5 590 541 2428 72 0 3 chr10 31623925 31624218 -108692547 + AluSc SINE Alu 1 292 -17 1389 277 138 31 chr10 31624218 31624681 -108692084 - MLT1G1 LTR MaLR -54 541 15 228 294 88 0 chr10 31624705 31624773 -108691992 - MIR SINE MIR -175 87 14 709 142 126 24 chr10 31624986 31625113 -108691652 + FLAM_C SINE Alu 3 142 -1 289 343 20 10 chr10 31625125 31625224 -108691541 - MER5A DNA MER1_type -5 184 85 1795 155 17 31 chr10 31625230 31625521 -108691244 + AluJo SINE Alu 1 287 -25 213 341 22 22 chr10 31625536 31625627 -108691138 - MER5A DNA MER1_type -92 97 7 787 287 141 52 chr10 31625635 31626130 -108690635 + LTR67 LTR ERVL 5 543 -14 1547 157 80 0 chr10 31626289 31626563 -108690202 - AluJo SINE Alu -16 296 1 2533 40 7 0 chr10 31626624 31626920 -108689845 - AluY SINE Alu -13 298 1 664 223 0 8 chr10 31627138 31627259 -108689506 + FLAM_A SINE Alu 2 121 -12 2369 104 0 0 chr10 31627771 31628102 -108688663 - AluSx SINE Alu 0 312 1 1384 222 300 3 chr10 31628234 31628847 -108687918 + LTR50 LTR ERVL 1 795 0 718 213 0 16 chr10 31629001 31629128 -108687637 + FLAM_C SINE Alu 2 126 -17 478 275 8 22 chr10 31629773 31630009 -108686756 + L1MDa LINE L1 1259 1499 -5031 932 231 17 54 chr10 31630112 31630410 -108686355 + L1MA9 LINE L1 5996 6282 -30 2156 122 0 0 chr10 31630500 31630812 -108685953 - AluSx SINE Alu 0 312 1 432 300 58 32 chr10 31631059 31631249 -108685516 - MIR SINE MIR -15 247 53 1646 164 47 89 chr10 31631834 31632285 -108684480 - MSTB1 LTR MaLR 0 432 1 584 320 144 19 chr10 31632649 31632961 -108683804 + L2 LINE L2 2959 3309 -4 282 95 0 0 chr10 31634679 31634721 -108682044 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 31634720 31634742 -108682023 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 222 318 45 11 chr10 31635044 31635132 -108681633 + L2 LINE L2 3182 3272 -41 334 279 27 36 chr10 31635254 31635365 -108681400 + L1MC4 LINE L1 6596 6705 -1337 * 360 236 67 22 chr10 31635295 31635384 -108681381 - L1MC4 LINE L1 -1337 6705 6613 345 162 73 0 chr10 31635361 31635429 -108681336 - L1MCa LINE L1 -4359 2067 1995 * 186 103 0 0 chr10 31635429 31635458 -108681307 + (GA)n Simple_repeat Simple_repeat 2 30 0 1496 187 3 7 chr10 31635460 31635743 -108681022 - AluJo SINE Alu -30 282 1 501 303 77 0 chr10 31635906 31636061 -108680704 + MIR SINE MIR 81 247 -15 222 254 73 0 chr10 31636758 31636813 -108679952 - L2 LINE L2 0 3272 3214 245 333 178 17 chr10 31636822 31637002 -108679763 - L2 LINE L2 -1254 2060 1852 244 254 28 0 chr10 31639010 31639081 -108677684 + L2 LINE L2 3201 3273 -40 753 253 178 18 chr10 31639275 31639663 -108677102 + MLT1J2 LTR MaLR 1 450 0 253 253 53 0 chr10 31640040 31640115 -108676650 + A-rich Low_complexity Low_complexity 4 82 0 2216 88 14 0 chr10 31640833 31641130 -108675635 - AluSc SINE Alu -7 302 2 188 283 11 76 chr10 31641758 31641850 -108674915 + MIR SINE MIR 174 259 -3 499 278 89 30 chr10 31642325 31642494 -108674271 - L2 LINE L2 0 3313 3135 578 215 5 126 chr10 31644180 31644371 -108672394 + MLT1A1 LTR MaLR 198 365 0 1556 165 11 37 chr10 31644506 31644779 -108671986 - MLT1A1 LTR MaLR 0 365 100 2361 70 0 0 chr10 31646093 31646392 -108670373 - AluY SINE Alu -12 299 1 264 170 64 32 chr10 31646995 31647089 -108669676 - MER113 DNA MER1_type? -405 116 20 192 262 28 65 chr10 31647209 31647316 -108669449 + MER5A DNA MER1_type 66 168 -21 1541 151 33 15 chr10 31647752 31648047 -108668718 + AluJo SINE Alu 7 306 0 196 346 77 15 chr10 31648111 31648241 -108668524 - L2 LINE L2 0 3313 3176 252 0 0 0 chr10 31648777 31648805 -108667960 + (CA)n Simple_repeat Simple_repeat 1 28 0 5082 133 30 6 chr10 31648838 31649642 -108667123 + L1PA16 LINE L1 5344 6166 0 229 71 0 0 chr10 31649649 31649677 -108667088 + AluSp SINE Alu 7 34 -268 1764 77 6 144 chr10 31649677 31650003 -108666762 + AluSp SINE Alu 18 298 -15 405 58 0 0 chr10 31650085 31650137 -108666628 + (TG)n Simple_repeat Simple_repeat 1 52 0 720 308 21 17 chr10 31650671 31650905 -108665860 - MIR SINE MIR 0 262 28 5079 131 8 24 chr10 31651271 31652067 -108664698 + LTR39 LTR ERV1 1 783 0 2206 109 0 0 chr10 31652234 31652538 -108664227 + AluSg SINE Alu 1 304 -6 208 360 31 31 chr10 31652815 31652976 -108663789 - L2 LINE L2 -35 3278 3118 2395 171 17 21 chr10 31653097 31653297 -108663468 + MSTB LTR MaLR 1 200 -226 2131 113 3 0 chr10 31653297 31653606 -108663159 + AluSx SINE Alu 1 310 -2 2395 171 17 21 chr10 31653606 31653825 -108662940 + MSTB LTR MaLR 200 418 -8 1189 198 85 26 chr10 31654386 31654837 -108661928 + MLT1E LTR MaLR 3 557 -31 1641 108 0 9 chr10 31654867 31655098 -108661667 - AluSx SINE Alu -83 229 1 320 225 11 0 chr10 31657235 31657324 -108659441 + GA-rich Low_complexity Low_complexity 1 90 0 639 174 35 99 chr10 31657347 31657418 -108659347 - MLT1A2 LTR MaLR -213 161 87 2418 66 7 0 chr10 31657418 31657721 -108659044 + AluY SINE Alu 1 305 -6 639 174 35 99 chr10 31657721 31657821 -108658944 - MLT1A2 LTR MaLR -287 87 1 1835 286 14 16 chr10 31657824 31658446 -108658319 - L2 LINE L2 -2004 1310 690 1840 201 36 25 chr10 31658447 31658885 -108657880 + LTR37B LTR ERV1 7 449 -19 1978 134 20 0 chr10 31658886 31659191 -108657574 - AluSx SINE Alu -1 311 1 1261 276 57 36 chr10 31659225 31659316 -108657449 - L2 LINE L2 -2618 696 608 2234 96 3 0 chr10 31659316 31659619 -108657146 + AluSx SINE Alu 1 304 -8 1261 276 57 36 chr10 31659619 31659947 -108656818 - L2 LINE L2 -2706 608 268 551 128 10 78 chr10 31660039 31660138 -108656627 + MLT1B LTR MaLR 1 92 -298 1316 192 60 91 chr10 31660138 31660513 -108656252 - MLT1A1 LTR MaLR -2 426 1 1020 184 148 41 chr10 31660514 31660574 -108656191 + MLT1B LTR MaLR 91 143 -247 2191 96 0 0 chr10 31660574 31660867 -108655898 - AluSq SINE Alu -20 293 1 1020 184 148 41 chr10 31660867 31661077 -108655688 + MLT1B LTR MaLR 143 390 0 286 29 0 0 chr10 31661372 31661407 -108655358 - MADE1 DNA Mariner -1 79 45 2167 109 0 3 chr10 31662147 31662458 -108654307 + AluSx SINE Alu 1 310 -2 2386 116 48 60 chr10 31662973 31663195 -108653570 - MSTC LTR MaLR 0 428 205 2074 131 0 3 chr10 31663195 31663507 -108653258 - AluSx SINE Alu -1 311 1 2386 116 48 60 chr10 31663507 31663616 -108653149 - MSTC LTR MaLR -223 205 101 2204 116 3 0 chr10 31663616 31663927 -108652838 - AluSx SINE Alu 0 312 1 2386 116 48 60 chr10 31663927 31664027 -108652738 - MSTC LTR MaLR -327 101 1 213 265 0 0 chr10 31665272 31665321 -108651444 + (GGCTG)n Simple_repeat Simple_repeat 5 53 0 182 301 0 81 chr10 31666315 31666438 -108650327 - L2 LINE L2 -2420 894 782 26 30 0 0 chr10 31666966 31666999 -108649766 + AT_rich Low_complexity Low_complexity 1 33 0 1668 175 0 16 chr10 31667002 31667305 -108649460 - AluJo SINE Alu -14 298 1 2313 108 36 28 chr10 31667717 31668078 -108648687 + THE1B LTR MaLR 1 364 0 181 313 94 0 chr10 31669653 31669717 -108647048 + MIR SINE MIR 118 187 -75 2060 119 0 0 chr10 31669745 31670030 -108646735 + AluSg SINE Alu 9 293 -17 22 56 0 0 chr10 31670388 31670424 -108646341 + AT_rich Low_complexity Low_complexity 1 36 0 572 296 74 40 chr10 31670563 31670860 -108645905 - L2 LINE L2 -2 3311 3005 297 128 0 0 chr10 31670958 31671005 -108645760 + (CA)n Simple_repeat Simple_repeat 2 48 0 863 130 0 0 chr10 31671336 31671459 -108645306 + FRAM SINE Alu 30 152 -24 1336 75 0 0 chr10 31671739 31671913 -108644852 - L1MA1 LINE L1 0 6302 6129 1839 117 0 83 chr10 31672870 31673195 -108643570 + AluSq SINE Alu 1 298 -15 192 313 0 0 chr10 31673443 31673507 -108643258 + MIR SINE MIR 132 195 -67 2229 100 3 0 chr10 31673517 31673827 -108642938 - AluSx SINE Alu -1 311 1 310 223 0 29 chr10 31673850 31673953 -108642812 + CT-rich Low_complexity Low_complexity 2 101 0 249 204 0 0 chr10 31674129 31674173 -108642592 - AluJ/monomer SINE Alu -257 44 1 335 172 0 0 chr10 31674193 31674251 -108642514 - MER63 DNA MER1_type -96 740 683 1667 176 36 0 chr10 31674605 31674906 -108641859 + AluJb SINE Alu 1 312 0 414 210 227 0 chr10 31675014 31675133 -108641632 - MIR SINE MIR -66 196 51 1639 174 23 7 chr10 31675636 31675941 -108640824 - AluJb SINE Alu 0 312 3 309 260 19 67 chr10 31676135 31676239 -108640526 + MIR SINE MIR 64 162 -46 533 260 78 13 chr10 31676936 31677090 -108639675 - L2 LINE L2 0 3313 3150 1773 271 41 36 chr10 31677163 31677241 -108639524 + MER69 DNA AcHobo 18 94 -1132 405 0 0 0 chr10 31677241 31677286 -108639479 + (CA)n Simple_repeat Simple_repeat 2 46 0 1769 153 7 0 chr10 31677288 31677575 -108639190 - AluJo SINE Alu -23 289 1 1773 271 41 36 chr10 31677575 31677777 -108638988 + MER69 DNA AcHobo 94 293 -933 180 0 0 0 chr10 31677777 31677797 -108638968 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2286 86 3 0 chr10 31677799 31678101 -108638664 - AluSp SINE Alu -10 303 1 1773 271 41 36 chr10 31678101 31678399 -108638366 + MER69 DNA AcHobo 293 606 -620 1078 226 137 30 chr10 31678405 31678450 -108638315 + MER69 DNA AcHobo 2035 2074 -452 2293 94 0 0 chr10 31678450 31678747 -108638018 - AluSq SINE Alu -16 297 1 1078 226 137 30 chr10 31678747 31679138 -108637627 + MER69 DNA AcHobo 2074 2518 -8 2093 107 0 19 chr10 31679616 31679925 -108636840 - AluSx SINE Alu -9 303 1 660 224 65 34 chr10 31680125 31680410 -108636355 - L1ME LINE L1 -299 5822 5539 2139 109 10 0 chr10 31681573 31681867 -108634898 - AluSx SINE Alu -15 297 1 591 272 54 33 chr10 31682333 31682517 -108634248 - MIR SINE MIR -11 251 64 2175 112 7 0 chr10 31684065 31684359 -108632406 - AluSx SINE Alu -16 296 1 267 264 114 43 chr10 31686317 31686457 -108630308 - L2 LINE L2 0 3313 3164 3463 70 16 0 chr10 31686798 31687244 -108629521 - MLT2A2 LTR ERVL 0 453 1 4048 135 65 7 chr10 31687814 31688540 -108628225 - L1PA16 LINE L1 -2 6164 5397 577 293 52 28 chr10 31688763 31689012 -108627753 + L3 LINE CR1 1307 1561 -16 180 0 0 0 chr10 31689012 31689032 -108627733 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1219 168 9 40 chr10 31689050 31689276 -108627489 - AluJo SINE Alu -50 262 44 213 0 81 0 chr10 31690498 31690535 -108626230 + T-rich Low_complexity Low_complexity 1 40 0 957 37 11 68 chr10 31690535 31690726 -108626039 + (TTTTA)n Simple_repeat Simple_repeat 1 180 0 2165 88 3 3 chr10 31690728 31691011 -108625754 - AluSg SINE Alu -21 289 7 1345 164 8 131 chr10 31691123 31691520 -108625245 + MER7A DNA MER2_type 1 346 0 361 225 28 0 chr10 31691617 31691688 -108625077 + MER7A DNA MER2_type 274 346 0 25 23 0 23 chr10 31691701 31691722 -108625043 + AT_rich Low_complexity Low_complexity 1 21 -21 2258 87 0 3 chr10 31691722 31692008 -108624757 - AluSq SINE Alu -28 285 1 25 23 0 23 chr10 31692008 31692029 -108624736 + AT_rich Low_complexity Low_complexity 21 42 0 264 280 0 30 chr10 31692082 31692214 -108624551 - L1ME LINE L1 -267 5854 5727 340 319 150 19 chr10 31692234 31692447 -108624318 - L1ME LINE L1 -2253 5555 5315 4228 21 0 0 chr10 31692468 31692954 -108623811 - L1PA3 LINE L1 -4 6151 5666 340 113 0 0 chr10 31693068 31693121 -108623644 + Alu SINE Alu 243 295 -7 2315 84 0 0 chr10 31693176 31693473 -108623292 - AluY SINE Alu -14 297 1 186 358 0 37 chr10 31693534 31693615 -108623150 - L2 LINE L2 -94 3219 3142 1000 167 0 0 chr10 31693707 31693869 -108622896 + AluJb SINE Alu 148 309 -3 1101 207 31 102 chr10 31694344 31694398 -108622367 + MLT1A1 LTR MaLR 1 57 -308 1957 158 0 16 chr10 31694398 31694714 -108622051 + AluJo SINE Alu 1 311 -1 1101 207 31 102 chr10 31694714 31695040 -108621725 + MLT1A1 LTR MaLR 57 354 -11 743 231 20 20 chr10 31695271 31695466 -108621299 + MER63A DNA MER1_type 1 195 -15 445 296 75 55 chr10 31696052 31696519 -108620246 - L2 LINE L2 -76 3237 2749 204 232 20 121 chr10 31696587 31696643 -108620122 + MER5A DNA MER1_type 80 123 -66 2228 112 3 0 chr10 31696643 31696948 -108619817 - AluSc SINE Alu -3 306 1 204 232 20 121 chr10 31696948 31696990 -108619775 + MER5A DNA MER1_type 123 168 -21 1152 230 89 11 chr10 31696990 31697177 -108619588 - MLT1B LTR MaLR 0 390 219 333 0 0 0 chr10 31697177 31697214 -108619551 + (GA)n Simple_repeat Simple_repeat 2 38 0 1152 230 89 11 chr10 31697214 31697387 -108619378 - MLT1B LTR MaLR -171 219 2 578 245 48 69 chr10 31697425 31697613 -108619152 - MER5A DNA MER1_type -3 186 3 1373 142 15 0 chr10 31697900 31698104 -108618661 - AluSx SINE Alu -105 207 1 202 209 0 83 chr10 31698688 31698736 -108618029 + L2 LINE L2 3217 3301 -12 1649 167 3 21 chr10 31698894 31699039 -108617726 - AluJo SINE Alu -30 282 136 207 0 0 0 chr10 31699039 31699062 -108617703 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1924 137 4 7 chr10 31699064 31699341 -108617424 - AluSx SINE Alu -36 276 1 1649 167 3 21 chr10 31699341 31699479 -108617286 - AluJo SINE Alu -177 135 1 201 39 0 0 chr10 31700396 31700422 -108616343 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 31700632 31700660 -108616105 + AT_rich Low_complexity Low_complexity 1 28 0 1900 125 3 34 chr10 31700879 31701175 -108615590 + AluJb SINE Alu 22 308 -4 2400 171 42 11 chr10 31701523 31701974 -108614791 - MER70A LTR ERVL -7 465 1 2194 155 5 19 chr10 31702672 31703039 -108613726 - THE1B LTR MaLR 0 364 3 1772 204 25 6 chr10 31703556 31703914 -108612851 - MLT1A1 LTR MaLR 0 365 1 454 293 39 10 chr10 31704062 31704267 -108612498 - L1MC/D LINE L1 -2059 5749 5539 552 281 55 79 chr10 31704359 31704779 -108611986 - L1MC/D LINE L1 -760 5386 4977 180 0 0 0 chr10 31704800 31704820 -108611945 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 502 263 29 88 chr10 31704837 31705062 -108611703 - L1MC/D LINE L1 -1519 4627 4419 1975 148 13 20 chr10 31705062 31705365 -108611400 - AluJb SINE Alu -11 301 1 502 263 29 88 chr10 31705365 31705413 -108611352 - L1MC/D LINE L1 -1727 4419 4370 1843 182 21 3 chr10 31705601 31705931 -108610834 + MER1B DNA MER1_type 2 337 0 328 384 9 22 chr10 31705974 31706001 -108610764 - L1MC/D LINE L1 -1975 4171 4145 218 32 32 0 chr10 31706001 31706032 -108610733 + (TG)n Simple_repeat Simple_repeat 1 32 0 328 384 9 22 chr10 31706032 31706228 -108610537 - L1MC/D LINE L1 -2001 4145 3951 2390 75 0 13 chr10 31706296 31706604 -108610161 + AluSx SINE Alu 1 304 -8 6151 132 37 6 chr10 31706652 31708170 -108608595 - L1MA6 LINE L1 -5 6295 4721 4593 98 9 2 chr10 31708326 31708971 -108607794 - L1PA11 LINE L1 -2 6172 5523 21 0 0 0 chr10 31709036 31709057 -108607708 + AT_rich Low_complexity Low_complexity 1 21 0 2297 85 10 13 chr10 31709216 31709521 -108607244 - AluY SINE Alu -7 304 1 976 325 84 36 chr10 31709521 31710275 -108606490 - L1MC/D LINE L1 -2838 3308 2519 3897 204 94 46 chr10 31710647 31711911 -108604854 - L1M4 LINE L1 -1218 4928 3604 233 139 26 43 chr10 31712065 31712141 -108604624 + CT-rich Low_complexity Low_complexity 1 74 0 22 35 0 0 chr10 31712828 31712857 -108603908 + AT_rich Low_complexity Low_complexity 1 29 0 368 284 105 36 chr10 31713081 31713528 -108603237 - HAL1 LINE L1 -947 1560 1083 611 282 167 8 chr10 31713536 31713788 -108602977 - L2 LINE L2 -7 3306 3015 3859 88 2 33 chr10 31714427 31714997 -108601768 + L1PB1 LINE L1 5597 6148 -3 562 285 120 37 chr10 31715268 31715643 -108601122 - MLT1J2 LTR MaLR -44 406 1 386 300 106 12 chr10 31716619 31716789 -108599976 + MIR SINE MIR 67 252 -10 208 377 23 31 chr10 31717540 31717670 -108599095 + MIR3 SINE MIR 3 131 -77 1572 191 0 4 chr10 31717957 31718213 -108598552 - AluJo SINE Alu -56 256 2 542 283 75 42 chr10 31719022 31719330 -108597435 + L1MD2 LINE L1 22 339 -6201 1721 230 95 66 chr10 31719460 31720429 -108596336 + L1MD2 LINE L1 876 1870 -4670 * 6436 235 46 33 chr10 31720417 31722686 -108594079 + L1MD2 LINE L1 3292 5529 -1224 1892 92 56 39 chr10 31722686 31722991 -108593774 + AluY SINE Alu 1 310 -1 6436 235 46 33 chr10 31722991 31723923 -108592842 + L1MD2 LINE L1 5529 6538 -215 237 65 0 0 chr10 31723923 31723954 -108592811 + (CA)n Simple_repeat Simple_repeat 2 32 0 6436 235 46 33 chr10 31723954 31724160 -108592605 + L1MD2 LINE L1 6538 6740 -13 1518 189 4 0 chr10 31724183 31724448 -108592317 + AluJo SINE Alu 36 301 -11 325 313 134 30 chr10 31726885 31727019 -108589746 + MER5B DNA MER1_type 30 177 -1 314 275 11 33 chr10 31727352 31727443 -108589322 - MIR SINE MIR -3 259 171 2057 105 66 12 chr10 31727456 31727991 -108588774 - MER51A LTR ERV1 0 634 1 556 288 41 0 chr10 31727991 31728161 -108588604 - MIR SINE MIR -84 178 2 2160 110 3 13 chr10 31728825 31729124 -108587641 + AluSx SINE Alu 1 296 -16 274 158 0 0 chr10 31730780 31730837 -108585928 - L1MB2 LINE L1 0 6171 6115 1896 128 4 4 chr10 31730837 31731110 -108585655 - AluSx SINE Alu -39 273 1 234 267 99 30 chr10 31731443 31731544 -108585221 - MLT1L LTR MaLR -137 478 371 1856 112 8 0 chr10 31731643 31731892 -108584873 + AluSx SINE Alu 1 251 -61 1415 103 0 0 chr10 31732190 31732375 -108584390 - AluSg/x SINE Alu -5 305 121 1517 52 0 0 chr10 31732379 31732553 -108584212 - SVA Other Other 0 1386 1213 832 228 0 10 chr10 31732588 31732794 -108583971 - SVA Other Other -915 471 268 2322 98 7 0 chr10 31732937 31733232 -108583533 - AluSx SINE Alu -15 297 1 195 294 209 25 chr10 31733418 31733581 -108583184 + MIR3 SINE MIR 16 208 0 454 260 35 46 chr10 31733615 31733788 -108582977 - L2 LINE L2 -2 3311 3141 2176 96 3 3 chr10 31734557 31734862 -108581903 + AluY SINE Alu 1 305 0 432 0 0 0 chr10 31735177 31735225 -108581540 + (CA)n Simple_repeat Simple_repeat 2 49 0 292 286 6 11 chr10 31735249 31735424 -108581341 + (TA)n Simple_repeat Simple_repeat 1 174 0 187 202 18 0 chr10 31735474 31735588 -108581177 + (TA)n Simple_repeat Simple_repeat 1 116 0 318 217 0 0 chr10 31735605 31735771 -108580994 + (TA)n Simple_repeat Simple_repeat 1 166 0 1313 205 4 16 chr10 31735785 31735902 -108580863 - AluJo SINE Alu -61 251 134 249 33 0 0 chr10 31735902 31735932 -108580833 + (TA)n Simple_repeat Simple_repeat 2 31 0 1313 205 4 16 chr10 31735932 31736068 -108580697 - AluJo SINE Alu -178 134 1 1968 143 55 25 chr10 31736728 31737092 -108579673 - THE1C LTR MaLR 0 375 1 2134 99 0 14 chr10 31738475 31738757 -108578008 - AluSx SINE Alu -9 303 26 1859 172 0 10 chr10 31738779 31739082 -108577683 - AluJo SINE Alu -12 300 1 789 224 0 42 chr10 31740121 31740313 -108576452 + MER58B DNA MER1_type 157 340 -1 921 175 0 85 chr10 31740323 31740413 -108576352 - MER3 DNA MER1_type -1 208 112 1945 113 4 4 chr10 31740413 31740678 -108576087 + AluSq SINE Alu 1 265 -48 224 30 30 0 chr10 31740687 31740720 -108576045 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 225 0 0 0 chr10 31740719 31740744 -108576021 + (CA)n Simple_repeat Simple_repeat 2 26 0 921 175 0 85 chr10 31740720 31740854 -108575911 - MER3 DNA MER1_type -105 104 16 1313 152 212 8 chr10 31741445 31741695 -108575070 - AluJb SINE Alu -11 301 1 398 210 12 12 chr10 31742116 31742197 -108574568 - MLT1J2 LTR MaLR -348 102 22 1714 112 4 0 chr10 31742295 31742528 -108574237 - AluSq SINE Alu -46 267 34 6534 119 163 96 chr10 31742595 31744186 -108572579 - pTR5 LTR ERV1 0 2438 741 2374 82 0 3 chr10 31746492 31746785 -108569980 + AluY SINE Alu 1 292 -19 256 239 57 0 chr10 31747222 31747310 -108569455 + L2 LINE L2 3220 3312 -1 1164 246 79 3 chr10 31747352 31747682 -108569083 + MLT2B1 LTR ERVL 1 355 -165 1561 269 140 10 chr10 31747919 31748433 -108568332 + MLT1G LTR MaLR 10 590 0 186 191 0 0 chr10 31748616 31748663 -108568102 + (TA)n Simple_repeat Simple_repeat 1 47 0 230 65 65 0 chr10 31748663 31748709 -108568056 - LTR66 LTR ERVL -171 439 391 638 166 0 6 chr10 31748733 31748914 -108567851 + (TA)n Simple_repeat Simple_repeat 1 180 0 744 151 0 0 chr10 31748940 31749119 -108567646 + (TA)n Simple_repeat Simple_repeat 2 180 0 803 159 0 0 chr10 31749181 31749307 -108567458 + FLAM_C SINE Alu 2 127 -6 24 53 0 0 chr10 31749876 31749914 -108566851 + AT_rich Low_complexity Low_complexity 1 38 0 180 0 0 0 chr10 31750679 31750699 -108566066 + (CA)n Simple_repeat Simple_repeat 1 20 0 1921 162 0 10 chr10 31753636 31753950 -108562815 - AluJb SINE Alu -1 311 1 1826 157 0 39 chr10 31754247 31754559 -108562206 - AluJb SINE Alu -11 301 2 2185 138 16 24 chr10 31754927 31755304 -108561461 + THE1C LTR MaLR 1 374 -1 1352 218 10 17 chr10 31755395 31755684 -108561081 - AluJo SINE Alu -25 287 1 878 271 35 25 chr10 31757638 31757952 -108558813 + MARNA DNA Mariner 141 457 -129 234 150 0 0 chr10 31758279 31758319 -108558446 + (TG)n Simple_repeat Simple_repeat 2 41 0 2102 115 0 11 chr10 31758482 31758823 -108557942 + AluSq SINE Alu 3 340 0 1647 156 10 36 chr10 31759592 31759894 -108556871 + AluJo SINE Alu 1 294 -18 1771 160 11 0 chr10 31760248 31760516 -108556249 + AluJo SINE Alu 11 281 -31 195 69 0 0 chr10 31760519 31760548 -108556217 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 401 190 0 13 chr10 31761239 31761318 -108555447 - MER116 DNA Mariner -2 78 1 183 287 115 0 chr10 31761891 31761978 -108554787 - MIR SINE MIR -109 153 57 27 87 0 0 chr10 31762263 31762332 -108554433 + AT_rich Low_complexity Low_complexity 1 69 0 1601 180 10 35 chr10 31762338 31762627 -108554138 - AluJo SINE Alu -30 282 1 2011 110 29 18 chr10 31763865 31764186 -108552579 + AluSx SINE Alu 1 324 0 504 273 7 0 chr10 31764284 31764427 -108552338 - L1ME3A LINE L1 -316 5854 5711 1324 244 94 30 chr10 31764433 31764867 -108551898 - MLT1C LTR MaLR 0 467 6 591 259 155 20 chr10 31764944 31765241 -108551524 - L1ME3A LINE L1 -538 5626 5290 662 277 63 26 chr10 31765250 31765597 -108551168 - L1ME3A LINE L1 -880 5266 4907 269 277 48 54 chr10 31765693 31765859 -108550906 - L1ME LINE L1 -369 5752 5588 406 200 120 10 chr10 31766240 31766340 -108550425 + L2 LINE L2 3200 3310 -3 484 256 29 74 chr10 31766685 31766727 -108550038 + MIR SINE MIR 4 46 -216 3475 126 23 2 chr10 31766727 31767243 -108549522 - MER1A DNA MER1_type 0 527 1 484 256 29 74 chr10 31767243 31767442 -108549323 + MIR SINE MIR 46 234 -28 1046 97 0 0 chr10 31767944 31768078 -108548687 - AluSq/x SINE Alu -178 134 1 2394 79 7 0 chr10 31768671 31768975 -108547790 - AluSp SINE Alu -7 306 1 2203 237 140 9 chr10 31769195 31769886 -108546879 - LTR50 LTR ERVL -9 786 5 380 250 0 11 chr10 31770510 31770598 -108546167 - MIR SINE MIR -140 122 36 803 158 0 15 chr10 31770699 31770832 -108545933 + FLAM_C SINE Alu 3 133 0 422 296 19 0 chr10 31770879 31770987 -108545778 - MER117 DNA MER1_type -77 120 11 1868 115 91 0 chr10 31771025 31771311 -108545454 - AluSx SINE Alu 0 312 1 280 130 0 37 chr10 31772768 31772822 -108543943 + LTR29 LTR ERV1 471 555 -67 2227 95 3 46 chr10 31772832 31773158 -108543607 + AluSx SINE Alu 1 312 0 252 307 13 0 chr10 31773523 31773598 -108543167 + (CATA)n Simple_repeat Simple_repeat 1 76 0 588 250 23 23 chr10 31773862 31774034 -108542731 + MIR SINE MIR 3 174 -88 649 261 10 41 chr10 31774109 31774304 -108542461 + MLT1L LTR MaLR 421 609 -6 2216 137 0 32 chr10 31774372 31774716 -108542049 - MER1B DNA MER1_type 0 339 7 1537 174 56 7 chr10 31775228 31775498 -108541267 - AluJo SINE Alu -18 294 12 405 267 46 0 chr10 31775519 31775650 -108541115 - MIR SINE MIR -3 259 123 8448 113 14 18 chr10 31776113 31776955 -108539810 - HSMAR2 DNA Mariner 0 1302 467 239 79 26 0 chr10 31776955 31776993 -108539772 + (TTAG)n Simple_repeat Simple_repeat 3 41 0 8448 113 14 18 chr10 31776993 31777456 -108539309 - HSMAR2 DNA Mariner -835 467 3 850 280 24 89 chr10 31778341 31778723 -108538042 + MLT1I LTR MaLR 6 362 -47 2226 101 0 46 chr10 31778723 31779050 -108537715 + AluSx SINE Alu 1 312 0 29 56 0 28 chr10 31779627 31779671 -108537094 + AT_rich Low_complexity Low_complexity 1 44 -26 2587 153 53 93 chr10 31779671 31780024 -108536741 + MER7C DNA MER2_type 1 320 -2708 2261 86 3 49 chr10 31780024 31780348 -108536417 - AluSp SINE Alu -4 309 1 2587 153 53 93 chr10 31780348 31780617 -108536148 + MER7C DNA MER2_type 320 598 -4 29 56 0 28 chr10 31780617 31780644 -108536121 + AT_rich Low_complexity Low_complexity 44 70 0 1757 164 20 3 chr10 31781321 31781613 -108535152 + AluJb SINE Alu 1 297 -15 207 0 0 0 chr10 31781616 31781639 -108535126 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 522 122 22 0 chr10 31781853 31781943 -108534822 - L1MD2 LINE L1 -1 6358 6267 5102 200 25 28 chr10 31781947 31782105 -108534660 - L1MD1 LINE L1 -265 5977 5820 2374 109 0 3 chr10 31782105 31782418 -108534347 - AluSx SINE Alu 0 312 1 5102 200 25 28 chr10 31782418 31782944 -108533821 - L1MD1 LINE L1 -422 5820 5294 1994 84 29 93 chr10 31782944 31783255 -108533510 - AluY SINE Alu -20 291 1 5102 200 25 28 chr10 31783255 31784566 -108532199 - L1MD1 LINE L1 -948 5294 3974 215 61 30 0 chr10 31785146 31785179 -108531586 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6263 131 18 42 chr10 31786429 31787361 -108529404 + L1MA6 LINE L1 4382 5335 -965 2171 119 3 0 chr10 31787361 31787655 -108529110 + AluSp SINE Alu 4 298 -15 6263 131 18 42 chr10 31787655 31788651 -108528114 + L1MA6 LINE L1 5335 6299 -1 1391 163 40 0 chr10 31788656 31788883 -108527882 + MER46A DNA MER2_type 1 236 0 1019 53 38 8 chr10 31789547 31789678 -108527087 + AluY SINE Alu 1 135 -176 229 65 0 0 chr10 31789711 31789757 -108527008 + LTR66 LTR ERVL 394 439 -171 1073 125 19 0 chr10 31789769 31789929 -108526836 + AluY SINE Alu 131 293 -18 2221 70 30 30 chr10 31790271 31790572 -108526193 + AluY SINE Alu 1 301 -10 216 0 0 0 chr10 31791683 31791707 -108525058 + (T)n Simple_repeat Simple_repeat 1 24 0 29 78 0 0 chr10 31792578 31792642 -108524123 + AT_rich Low_complexity Low_complexity 1 64 0 956 139 0 0 chr10 31792642 31792771 -108523994 - FLAM_C SINE Alu -3 130 2 828 258 163 79 chr10 31792792 31793284 -108523481 + MLT1H LTR MaLR 1 533 -16 23 33 0 0 chr10 31793715 31793745 -108523020 + AT_rich Low_complexity Low_complexity 1 30 0 504 184 73 18 chr10 31793756 31793865 -108522900 - LTR67 LTR ERVL -8 549 435 2065 139 0 3 chr10 31793917 31794226 -108522539 + AluJb SINE Alu 1 308 -4 927 135 30 0 chr10 31794274 31794407 -108522358 + AluSx SINE Alu 1 137 -175 313 200 0 113 chr10 31794407 31794487 -108522278 + AluSg/x SINE Alu 217 275 -25 1650 179 3 17 chr10 31794830 31795126 -108521639 - AluJo SINE Alu -19 293 2 185 204 0 56 chr10 31795131 31795185 -108521580 + MIR SINE MIR 128 178 -84 372 333 97 6 chr10 31795281 31795494 -108521271 + MIR SINE MIR 3 234 -28 576 191 0 25 chr10 31796188 31796345 -108520420 + GA-rich Low_complexity Low_complexity 3 155 0 316 183 0 108 chr10 31797075 31797168 -108519597 - MIR SINE MIR 0 262 180 1912 122 7 17 chr10 31797195 31797490 -108519275 - AluSx SINE Alu -17 295 4 288 276 11 11 chr10 31797497 31797584 -108519181 + L2 LINE L2 3226 3312 -1 385 244 122 32 chr10 31797587 31797743 -108519022 - MIR SINE MIR -79 183 14 1964 155 135 26 chr10 31797950 31798336 -108518429 - MSTA LTR MaLR 0 428 1 820 198 55 42 chr10 31798785 31799040 -108517725 - MLT1F LTR MaLR 0 542 244 562 266 0 8 chr10 31799038 31799166 -108517599 - MLT1F LTR MaLR -415 127 1 * 445 273 79 0 chr10 31799166 31799305 -108517460 + MIR SINE MIR 66 215 -47 381 22 0 0 chr10 31799737 31799783 -108516982 + (CA)n Simple_repeat Simple_repeat 2 47 0 867 148 0 0 chr10 31800839 31800974 -108515791 - FRAM SINE Alu -4 172 38 1283 274 102 19 chr10 31801141 31801604 -108515161 + MLT1H1 LTR MaLR 1 501 -54 949 194 42 5 chr10 31803108 31803299 -108513466 - AluJo SINE Alu -30 282 85 2278 140 0 3 chr10 31803308 31803658 -108513107 + L1PB4 LINE L1 5470 5818 -338 1068 158 0 18 chr10 31803658 31803829 -108512936 + FRAM SINE Alu 1 160 -16 1502 229 3 0 chr10 31803842 31804152 -108512613 + L1PB4 LINE L1 5846 6156 0 1929 135 80 0 chr10 31804585 31804874 -108511891 + AluSx SINE Alu 1 312 0 473 297 102 95 chr10 31805232 31805514 -108511251 - L2 LINE L2 -6 3266 2988 1722 172 43 20 chr10 31805514 31805816 -108510949 + AluJb SINE Alu 3 311 -1 473 297 102 95 chr10 31805816 31805899 -108510866 - L2 LINE L2 -284 2988 2907 2174 109 3 3 chr10 31805899 31806193 -108510572 + AluSx SINE Alu 1 294 -18 473 297 102 95 chr10 31806193 31806447 -108510318 - L2 LINE L2 -365 2907 2624 3015 126 61 18 chr10 31806447 31806940 -108509825 - MER49 LTR ERV1 0 923 410 754 141 92 43 chr10 31806921 31807084 -108509681 - MER49 LTR ERV1 -752 171 1 * 209 185 37 0 chr10 31807084 31807138 -108509627 - L2 LINE L2 -687 2627 2572 2094 106 7 0 chr10 31807210 31807530 -108509235 - AluSx SINE Alu 0 322 1 604 266 54 33 chr10 31807997 31808181 -108508584 - MIR SINE MIR -11 251 64 332 226 47 28 chr10 31809384 31809490 -108507275 + L3b LINE CR1 1288 1395 -188 529 309 0 0 chr10 31809749 31809927 -108506838 + (TGG)n Simple_repeat Simple_repeat 2 179 0 677 291 84 36 chr10 31810870 31810985 -108505780 + MLT1L LTR MaLR 135 243 -372 1102 224 129 79 chr10 31810985 31811481 -108505284 + LTR33 LTR ERVL 1 521 0 677 291 84 36 chr10 31811481 31811781 -108504984 + MLT1L LTR MaLR 243 570 -45 1555 174 28 25 chr10 31811825 31812107 -108504658 - AluJo SINE Alu -25 287 5 180 77 0 0 chr10 31812420 31812446 -108504319 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 80 0 0 chr10 31812912 31812962 -108503803 + AT_rich Low_complexity Low_complexity 1 50 0 1786 175 0 7 chr10 31813125 31813416 -108503349 - AluJo SINE Alu -23 289 1 1867 156 0 31 chr10 31814017 31814337 -108502428 + AluJb SINE Alu 1 310 -2 296 260 16 57 chr10 31814385 31814508 -108502257 + MIR SINE MIR 74 191 -71 234 331 58 16 chr10 31814924 31815166 -108501599 + L2 LINE L2 2510 2761 -553 2043 130 0 23 chr10 31815428 31815729 -108501036 - AluSx SINE Alu -16 296 3 372 299 0 0 chr10 31815976 31816093 -108500672 + (TGG)n Simple_repeat Simple_repeat 2 118 0 403 209 89 73 chr10 31817189 31817380 -108499385 + L1 LINE L1 3796 3989 -2157 562 131 0 0 chr10 31817414 31817527 -108499238 + AluY SINE Alu 218 330 0 979 276 47 17 chr10 31817534 31817940 -108498825 + L1 LINE L1 4019 4436 -1710 1149 246 63 93 chr10 31818032 31818625 -108498140 + L1MC5 LINE L1 6668 7242 -733 437 284 106 22 chr10 31818663 31818984 -108497781 + L1MC5 LINE L1 7261 7393 -415 990 200 25 10 chr10 31819011 31819211 -108497554 - AluJb SINE Alu -24 288 86 403 231 146 75 chr10 31819225 31819546 -108497219 + L1MC5 LINE L1 7552 7895 -66 261 83 0 0 chr10 31819583 31819619 -108497146 + (T)n Simple_repeat Simple_repeat 1 36 0 1440 156 36 57 chr10 31819619 31819920 -108496845 + AluJo SINE Alu 2 296 -16 1858 153 0 27 chr10 31820755 31821056 -108495709 - AluSx SINE Alu -19 293 1 1687 133 43 47 chr10 31821906 31822207 -108494558 - AluSx SINE Alu -12 300 1 786 156 16 0 chr10 31822412 31822534 -108494231 - FLAM_C SINE Alu -19 124 1 2153 101 24 0 chr10 31822563 31822850 -108493915 - AluSp SINE Alu -19 294 1 542 245 41 54 chr10 31823152 31823299 -108493466 - MIR SINE MIR -108 154 10 300 320 96 0 chr10 31823496 31823621 -108493144 + L2 LINE L2 3136 3272 0 222 37 0 0 chr10 31823925 31823952 -108492813 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 485 284 32 42 chr10 31824735 31824925 -108491840 + MIR3 SINE MIR 14 201 -7 1200 264 75 45 chr10 31825013 31825482 -108491283 + LTR33 LTR ERVL 1 483 -38 946 176 106 10 chr10 31825634 31825833 -108490932 - L1PB4 LINE L1 -44 6112 5895 1313 112 0 11 chr10 31826137 31826316 -108490449 - AluSg/x SINE Alu -52 260 84 223 257 19 67 chr10 31826766 31826871 -108489894 - L2 LINE L2 -442 2872 2773 660 262 2 3 chr10 31826916 31827069 -108489696 + MLT1C LTR MaLR 22 175 -215 1701 168 3 34 chr10 31827073 31827364 -108489401 + AluJo SINE Alu 1 282 -30 840 163 0 15 chr10 31827560 31827695 -108489070 + FLAM_C SINE Alu 1 133 0 763 255 42 42 chr10 31827696 31827935 -108488830 + MLT1C LTR MaLR 207 445 -22 3743 155 61 120 chr10 31828240 31829163 -108487602 - MER21A LTR ERV1 -28 903 36 697 113 9 9 chr10 31829229 31829344 -108487421 - HSMAR2 DNA Mariner -2 1300 1186 357 198 47 93 chr10 31829600 31829769 -108486996 - MLT1H LTR MaLR -3 552 387 388 280 102 47 chr10 31829843 31830079 -108486686 - MLT1H LTR MaLR -297 252 4 313 249 46 19 chr10 31830968 31831092 -108485673 - MLT1H LTR MaLR 0 555 437 347 354 88 32 chr10 31831158 31831211 -108485554 - L2 LINE L2 -924 2390 2341 2119 113 10 0 chr10 31831211 31831502 -108485263 - AluSx SINE Alu -18 294 1 347 354 88 32 chr10 31831502 31831895 -108484870 - L2 LINE L2 -973 2341 1897 528 160 118 25 chr10 31831895 31832014 -108484751 + MER94 DNA DNA 1 130 -4 347 354 88 32 chr10 31832014 31832188 -108484577 - L2 LINE L2 -1417 1897 1734 2217 105 34 0 chr10 31832218 31832514 -108484251 - AluSx SINE Alu -6 306 1 393 22 0 0 chr10 31832653 31832699 -108484066 + (CA)n Simple_repeat Simple_repeat 1 46 0 589 285 23 50 chr10 31833772 31833993 -108482772 + MIR SINE MIR 37 251 -11 1416 157 35 4 chr10 31834064 31834294 -108482471 + AluJo SINE Alu 71 307 -5 2040 142 0 3 chr10 31834864 31835175 -108481590 - AluJo SINE Alu -2 310 1 323 246 34 87 chr10 31835632 31835839 -108480926 - L2 LINE L2 -11 3302 3107 350 229 108 90 chr10 31835897 31836016 -108480749 - L1ME4a LINE L1 -295 5826 5711 399 41 0 0 chr10 31836016 31836065 -108480700 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 350 229 108 90 chr10 31836065 31836086 -108480679 - L1ME4a LINE L1 -410 5711 5692 2082 109 22 0 chr10 31836086 31836361 -108480404 - AluSx SINE Alu -22 290 10 308 64 21 0 chr10 31836368 31836415 -108480350 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 350 229 108 90 chr10 31836415 31836488 -108480277 - L1ME4a LINE L1 -434 5687 5600 1619 175 3 41 chr10 31836502 31836822 -108479943 - AluJb SINE Alu -4 308 1 365 231 0 0 chr10 31837254 31837332 -108479433 + MER116 DNA Mariner 2 79 -1 1259 113 6 0 chr10 31837572 31837749 -108479016 + L1PB1 LINE L1 5974 6151 0 231 121 0 0 chr10 31837789 31837822 -108478943 + LTR54 LTR ERV1 407 439 -71 2330 108 0 0 chr10 31837839 31838135 -108478630 - AluSq SINE Alu -17 296 1 288 29 0 0 chr10 31838873 31838908 -108477857 - MADE1 DNA Mariner -44 36 2 780 204 180 0 chr10 31839203 31839414 -108477351 - MLT1B LTR MaLR 0 390 142 2422 64 7 0 chr10 31839415 31839711 -108477054 + AluY SINE Alu 3 300 -11 183 258 24 97 chr10 31840055 31840179 -108476586 - MIR SINE MIR -64 144 30 1710 168 40 23 chr10 31840500 31840803 -108475962 - AluJo SINE Alu -4 308 1 439 259 0 30 chr10 31840803 31840934 -108475831 - MIR SINE MIR -38 224 98 273 146 40 0 chr10 31840942 31840998 -108475767 - MLT1G1 LTR MaLR -2 590 483 2569 71 0 3 chr10 31841001 31841311 -108475454 + AluSc SINE Alu 1 309 0 681 182 8 3 chr10 31841352 31841480 -108475285 + L1ME1 LINE L1 5862 5987 -179 450 156 22 0 chr10 31841480 31841561 -108475204 + L1MD2 LINE L1 6267 6358 -1 681 182 8 3 chr10 31841561 31841573 -108475192 + L1ME1 LINE L1 5987 5997 -169 243 0 0 0 chr10 31841775 31841802 -108474963 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1803 158 20 3 chr10 31841805 31842097 -108474668 - AluJb SINE Alu -15 297 1 29 56 0 28 chr10 31842774 31842801 -108473964 + AT_rich Low_complexity Low_complexity 1 27 -43 2654 148 53 93 chr10 31842801 31843070 -108473695 - MER7C DNA MER2_type -2430 598 320 2297 88 3 31 chr10 31843070 31843388 -108473377 + AluSp SINE Alu 1 309 -4 2654 148 53 93 chr10 31843388 31843741 -108473024 - MER7C DNA MER2_type -2708 320 1 29 56 0 28 chr10 31843741 31843785 -108472980 + AT_rich Low_complexity Low_complexity 27 70 0 545 255 43 64 chr10 31843890 31844078 -108472687 + MER5A DNA MER1_type 3 186 -3 1227 228 92 11 chr10 31844116 31844288 -108472477 + MLT1B LTR MaLR 2 159 -231 207 0 0 0 chr10 31844288 31844311 -108472454 + (TC)n Simple_repeat Simple_repeat 2 24 0 1227 228 92 11 chr10 31844311 31844498 -108472267 + MLT1B LTR MaLR 159 390 0 2230 115 3 0 chr10 31844540 31844845 -108471920 + AluSc SINE Alu 1 306 -3 288 314 52 26 chr10 31844958 31845152 -108471613 + L2 LINE L2 2739 2937 -377 1255 226 0 24 chr10 31845777 31846064 -108470701 - AluJo SINE Alu -32 280 1 210 118 0 0 chr10 31846800 31846834 -108469931 + (CA)n Simple_repeat Simple_repeat 2 35 0 2258 172 12 34 chr10 31848222 31848640 -108468125 - Tigger2a DNA MER2_type 0 434 26 420 257 18 0 chr10 31849240 31849349 -108467416 - MER81 DNA DNA 0 114 4 303 226 0 24 chr10 31849502 31849526 -108467239 + L1MC4 LINE L1 6622 6645 -1397 1705 169 3 34 chr10 31849526 31849822 -108466943 - AluJb SINE Alu -25 287 1 303 226 0 24 chr10 31849822 31849881 -108466884 + L1MC4 LINE L1 6645 6703 -1339 192 158 0 0 chr10 31849882 31849920 -108466845 + (TG)n Simple_repeat Simple_repeat 1 38 0 266 115 0 39 chr10 31849921 31849973 -108466792 + MER4-int LTR ERV1 1113 1162 -5436 527 173 9 0 chr10 31849974 31850084 -108466681 + (TG)n Simple_repeat Simple_repeat 2 112 0 227 114 23 0 chr10 31850218 31850262 -108466503 + CT-rich Low_complexity Low_complexity 3 47 0 242 300 0 0 chr10 31850495 31850555 -108466210 + MER81 DNA DNA 5 64 -50 378 0 0 0 chr10 31850695 31850737 -108466028 + (TA)n Simple_repeat Simple_repeat 2 43 0 1973 141 0 4 chr10 31850739 31851015 -108465750 - AluSx SINE Alu -37 275 1 1701 185 3 7 chr10 31851403 31851695 -108465070 - AluJb SINE Alu -16 296 6 1983 93 0 0 chr10 31853827 31854074 -108462691 + AluY SINE Alu 1 247 -64 1658 160 6 47 chr10 31854260 31854578 -108462187 - AluJo SINE Alu -7 305 1 185 260 280 20 chr10 31854848 31854998 -108461767 - L2 LINE L2 -989 2325 2137 457 311 57 0 chr10 31855066 31855243 -108461522 - L2 LINE L2 -1287 2027 1841 824 211 0 12 chr10 31855248 31855414 -108461351 - FRAM SINE Alu -12 164 1 332 325 31 0 chr10 31855414 31855577 -108461188 - L2 LINE L2 -1463 1851 1684 1584 192 10 19 chr10 31855588 31855901 -108460864 - AluJo SINE Alu -2 310 1 606 220 134 95 chr10 31855963 31856417 -108460348 + MLT1L LTR MaLR 143 614 -1 2293 79 34 0 chr10 31857263 31857555 -108459210 - AluSq SINE Alu -11 302 1 451 253 207 15 chr10 31857555 31857753 -108459012 + MER102b DNA MER1_type 75 310 -31 1632 184 31 10 chr10 31858873 31859166 -108457599 + AluJo SINE Alu 1 299 -13 189 214 0 0 chr10 31859835 31859877 -108456888 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 403 177 0 149 chr10 31860350 31860475 -108456290 - FLAM_A SINE Alu -182 120 17 2417 140 6 8 chr10 31860475 31860840 -108455925 - THE1B LTR MaLR 0 364 1 403 177 0 149 chr10 31860840 31860855 -108455910 - FLAM_A SINE Alu -285 17 1 704 152 0 0 chr10 31860856 31860955 -108455810 - 5S rRNA rRNA -1 120 22 207 0 0 0 chr10 31861499 31861522 -108455243 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2066 113 0 0 chr10 31861587 31861861 -108454904 + AluSx SINE Alu 6 279 -33 291 28 0 0 chr10 31861861 31861897 -108454868 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 23 54 0 0 chr10 31862736 31862773 -108453992 + AT_rich Low_complexity Low_complexity 1 37 0 292 272 10 10 chr10 31863544 31863647 -108453118 - L1ME3 LINE L1 -4 6158 6056 2350 98 7 0 chr10 31863853 31864159 -108452606 + AluSq SINE Alu 1 308 -5 201 163 0 23 chr10 31864941 31864984 -108451781 - L2 LINE L2 -1 3271 3230 884 282 74 57 chr10 31867295 31867400 -108449365 + L1M4 LINE L1 2901 3003 -3143 1522 114 50 5 chr10 31867400 31867620 -108449145 - MER30 DNA MER1_type 0 230 1 884 282 74 57 chr10 31867620 31868465 -108448300 + L1M4 LINE L1 3003 3867 -2279 1377 195 4 23 chr10 31868686 31868942 -108447823 + AluJo SINE Alu 6 256 -56 225 319 59 50 chr10 31869248 31869367 -108447398 + MIR3 SINE MIR 58 177 -31 2435 82 18 108 chr10 31869539 31869939 -108446826 - THE1B LTR MaLR 0 364 1 2244 99 3 19 chr10 31870207 31870521 -108446244 + AluSc SINE Alu 1 309 0 307 283 158 26 chr10 31870669 31870821 -108445944 + MER5A DNA MER1_type 18 189 0 314 167 12 0 chr10 31871002 31871086 -108445679 + CT-rich Low_complexity Low_complexity 2 86 0 564 96 32 21 chr10 31871975 31872069 -108444696 + MER4A LTR ERV1 1 95 -569 1718 140 162 58 chr10 31872072 31872381 -108444384 + MER4A LTR ERV1 262 616 -48 2401 105 0 3 chr10 31872381 31872694 -108444071 - AluSx SINE Alu 0 312 1 1718 140 162 58 chr10 31872694 31872749 -108444016 + MER4A LTR ERV1 616 664 0 1471 196 33 33 chr10 31873272 31873573 -108443192 - AluJo SINE Alu -1 301 1 2165 116 0 22 chr10 31875435 31875754 -108441011 + AluSx SINE Alu 1 312 0 802 167 8 0 chr10 31876041 31876173 -108440592 + FLAM_A SINE Alu 1 133 0 263 286 9 18 chr10 31876442 31876554 -108440211 + L1MD1 LINE L1 5762 5872 -1936 531 308 60 0 chr10 31876805 31876990 -108439775 + MIR SINE MIR 5 200 -62 2176 115 0 19 chr10 31877039 31877352 -108439413 + AluSg SINE Alu 4 310 0 1019 170 6 22 chr10 31877761 31877943 -108438822 - FRAM SINE Alu 0 176 1 1208 122 11 26 chr10 31878242 31878431 -108438334 + AluJb SINE Alu 107 292 -20 289 321 110 23 chr10 31879684 31879902 -108436863 - MIR SINE MIR -6 256 20 2082 73 0 0 chr10 31880820 31881066 -108435699 - AluY SINE Alu -65 246 1 2114 130 0 7 chr10 31881787 31882087 -108434678 - AluSx SINE Alu -14 298 1 1388 204 74 9 chr10 31932236 31932552 -108384213 + L1MD1 LINE L1 5896 6235 -7 2108 100 0 13 chr10 31932552 31932852 -108383913 + AluSq SINE Alu 1 296 -17 647 233 0 0 chr10 31933328 31933461 -108383304 - FLAM_A SINE Alu -4 138 6 2108 119 3 0 chr10 31933538 31933841 -108382924 - AluSc SINE Alu -5 304 1 2121 111 10 0 chr10 31933842 31934139 -108382626 - AluSq SINE Alu -13 300 1 24 32 0 0 chr10 31935404 31935435 -108381330 + AT_rich Low_complexity Low_complexity 1 31 0 777 138 31 15 chr10 31935498 31935628 -108381137 + FLAM_C SINE Alu 1 132 -1 1894 114 11 0 chr10 31935661 31935942 -108380823 + AluSq SINE Alu 1 320 0 190 0 111 0 chr10 31935942 31935978 -108380787 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1916 125 25 0 chr10 31936489 31936845 -108379920 + AluSx SINE Alu 1 363 0 247 204 0 19 chr10 31937680 31937734 -108379031 + (TG)n Simple_repeat Simple_repeat 1 53 0 249 279 156 39 chr10 31937947 31938101 -108378664 - MER3 DNA MER1_type -83 126 2 2091 93 3 7 chr10 31938246 31938548 -108378217 + AluY SINE Alu 4 304 -7 773 214 14 0 chr10 31938582 31938727 -108378038 + Tigger3(Golem) DNA MER2_type 2891 3037 0 1967 112 21 0 chr10 31938945 31939231 -108377534 + AluSx SINE Alu 13 304 -8 2480 47 0 0 chr10 31940141 31940440 -108376325 - AluY SINE Alu -12 299 1 383 258 149 46 chr10 31941284 31941478 -108375287 + MIR SINE MIR 49 262 0 200 169 0 17 chr10 31941526 31941585 -108375180 + (TA)n Simple_repeat Simple_repeat 1 58 0 770 183 0 30 chr10 31941589 31941720 -108375045 - FLAM_C SINE Alu -14 129 3 929 70 86 0 chr10 31941872 31942000 -108374765 - MER85 DNA T2_type 0 139 1 802 246 87 5 chr10 31942004 31942211 -108374554 - MIR SINE MIR -34 228 5 351 119 0 0 chr10 31942850 31942917 -108373848 + (CATA)n Simple_repeat Simple_repeat 2 68 0 4509 49 7 0 chr10 31943289 31943840 -108372925 + L1PA7 LINE L1 5596 6150 -4 691 286 44 18 chr10 31943897 31944124 -108372641 - MIR SINE MIR -2 260 28 1327 156 5 0 chr10 31945149 31945361 -108371404 - AluSx SINE Alu -99 213 1 370 206 68 27 chr10 31945573 31945740 -108371025 + MER34 LTR ERV1 1 237 -348 992 156 0 33 chr10 31945748 31945959 -108370806 - AluSc SINE Alu -15 294 91 2147 135 28 38 chr10 31946333 31946371 -108370394 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31946371 31946677 -108370088 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31946677 31946895 -108369870 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31946895 31947235 -108369530 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31947235 31947369 -108369396 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31948954 31949259 -108367506 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31950095 31950218 -108366547 + L2 LINE L2 3167 3313 0 2185 80 3 3 chr10 31951051 31951340 -108365425 - AluSg1 SINE Alu -20 289 1 1022 188 92 98 chr10 31952132 31952599 -108364166 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31954171 31954535 -108362230 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31954853 31954932 -108361833 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31955741 31955865 -108360900 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31955865 31956156 -108360609 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31956156 31956308 -108360457 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31956520 31956979 -108359786 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31957627 31957924 -108358841 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31958453 31958773 -108357992 - AluJo SINE Alu 0 327 3 2014 135 0 7 chr10 31958949 31959253 -108357512 - AluSx SINE Alu -10 302 1 694 175 0 0 chr10 31960848 31960968 -108355797 + AluSg/x SINE Alu 190 309 0 2019 138 0 0 chr10 31961554 31961865 -108354900 + AluSx SINE Alu 1 311 -1 466 217 104 26 chr10 31962284 31962399 -108354366 + L2 LINE L2 3188 3311 -2 228 163 0 0 chr10 31963570 31963613 -108353152 + T-rich Low_complexity Low_complexity 1 43 0 237 33 0 0 chr10 31963891 31963921 -108352844 + (TG)n Simple_repeat Simple_repeat 2 31 0 183 42 0 0 chr10 31964238 31964262 -108352503 + (A)n Simple_repeat Simple_repeat 1 24 0 206 121 0 0 chr10 31966273 31966306 -108350459 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 333 282 77 51 chr10 31967099 31967255 -108349510 + MER20B DNA MER1_type 5 164 -619 2183 95 0 16 chr10 31967394 31967699 -108349066 - AluSg SINE Alu -9 301 2 2152 122 0 3 chr10 31968128 31968439 -108348326 - AluSx SINE Alu -1 311 2 2165 106 0 0 chr10 31968852 31969153 -108347612 - AluSg SINE Alu -9 301 1 1048 83 0 0 chr10 31969153 31969286 -108347479 - AluSg SINE Alu -177 133 1 205 240 20 40 chr10 31970605 31970655 -108346110 - MIR SINE MIR -201 61 13 315 209 302 0 chr10 31970663 31970802 -108345963 - MER5A DNA MER1_type 0 189 9 1565 183 0 7 chr10 31972225 31972520 -108344245 + AluJo SINE Alu 5 297 -15 1379 218 200 43 chr10 31972993 31973454 -108343311 + MER50 LTR ERV1 10 592 -142 1898 93 72 0 chr10 31973454 31973732 -108343033 - AluSx SINE Alu -14 298 1 1379 218 200 43 chr10 31973732 31973880 -108342885 + MER50 LTR ERV1 592 715 -19 2331 157 96 26 chr10 31973938 31974436 -108342329 + L1MB3 LINE L1 5651 6183 0 2080 110 0 19 chr10 31975441 31975749 -108341016 - AluSx SINE Alu -10 302 1 865 215 6 0 chr10 31976065 31976237 -108340528 - FRAM SINE Alu -4 172 1 484 245 37 31 chr10 31976362 31976525 -108340240 + MER5B DNA MER1_type 2 165 -13 278 310 100 0 chr10 31977661 31977761 -108339004 + MIR SINE MIR 3 112 -150 22 0 0 0 chr10 31978704 31978726 -108338039 + AT_rich Low_complexity Low_complexity 1 22 0 2229 95 0 0 chr10 31978736 31979030 -108337735 + AluSq SINE Alu 1 294 -19 345 207 299 0 chr10 31980076 31980163 -108336602 + MER44D DNA MER2_type 1 383 -226 1647 140 0 73 chr10 31980242 31980556 -108336209 - AluSx SINE Alu -21 291 1 186 133 0 0 chr10 31980580 31980610 -108336155 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1494 194 0 14 chr10 31980618 31980902 -108335863 - AluJo SINE Alu -32 280 1 758 116 20 62 chr10 31980902 31981048 -108335717 + MER44D DNA MER2_type 466 605 0 473 282 81 6 chr10 31981150 31981324 -108335441 - L1MC4a LINE L1 -1934 5874 5688 518 224 139 54 chr10 31981366 31981589 -108335176 - L1MC4a LINE L1 -2249 5559 5318 204 138 46 0 chr10 31981738 31981803 -108334962 + (TA)n Simple_repeat Simple_repeat 2 69 0 315 259 60 43 chr10 31981835 31981942 -108334823 - L1MC4a LINE L1 -1007 5139 5028 1994 123 7 0 chr10 31981942 31982242 -108334523 - AluSx SINE Alu -10 302 1 764 179 0 0 chr10 31982254 31982377 -108334388 - FLAM_C SINE Alu -19 124 2 476 283 23 40 chr10 31982380 31982733 -108334032 - L1MC5 LINE L1 -34 7927 7581 2061 133 0 0 chr10 31982787 31983088 -108333677 - AluSx SINE Alu -11 301 1 340 291 92 8 chr10 31983101 31983352 -108333413 - L1MC4a LINE L1 -1133 5013 4742 373 342 76 46 chr10 31983364 31983668 -108333097 - L1MC4a LINE L1 -1465 4681 4369 5032 185 139 103 chr10 31984346 31986040 -108330725 + MER52A LTR ERV1 1 1755 0 1732 138 112 4 chr10 31986483 31986751 -108330014 - AluSx SINE Alu -15 297 1 2230 109 10 3 chr10 31988926 31989228 -108327537 + AluSc SINE Alu 1 304 -5 206 276 66 0 chr10 31989274 31989350 -108327415 - MER5A DNA MER1_type -57 132 52 180 0 0 0 chr10 31989362 31989382 -108327383 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1524 161 36 29 chr10 31989387 31989661 -108327104 - AluJo SINE Alu -36 276 1 1298 115 39 0 chr10 31989864 31990046 -108326719 + AluSc SINE Alu 109 297 -12 311 205 17 17 chr10 31990317 31990434 -108326331 + T-rich Low_complexity Low_complexity 3 119 0 22 35 0 0 chr10 31990598 31990627 -108326138 + AT_rich Low_complexity Low_complexity 1 29 0 1009 179 0 6 chr10 31991782 31991950 -108324815 + FRAM SINE Alu 1 160 -16 1351 107 5 5 chr10 31993063 31993259 -108323506 - AluSg/x SINE Alu 0 310 115 320 184 37 118 chr10 31993313 31993449 -108323316 - LTR48 LTR ERV1 -9 778 654 301 75 0 0 chr10 31993563 31993603 -108323162 - Alu SINE Alu -261 42 3 21 57 0 0 chr10 31993615 31993650 -108323115 + AT_rich Low_complexity Low_complexity 1 35 0 823 121 0 0 chr10 31993657 31993773 -108322992 - FLAM_C SINE Alu -8 135 20 318 220 0 0 chr10 31994519 31994619 -108322146 + (CA)n Simple_repeat Simple_repeat 1 100 0 2814 20 0 0 chr10 31994657 31994961 -108321804 + AluY SINE Alu 1 304 -7 1764 148 36 13 chr10 31995019 31995324 -108321441 + AluSq SINE Alu 1 312 -1 306 280 37 63 chr10 31995509 31995827 -108320938 + HAL1 LINE L1 982 1292 -1215 1401 154 30 21 chr10 31995827 31996061 -108320704 - MER46A DNA MER2_type 0 236 1 306 280 37 63 chr10 31996061 31996092 -108320673 + HAL1 LINE L1 1292 1322 -1185 761 233 112 109 chr10 31996112 31996747 -108320018 + LTR41 LTR ERVL 3 642 -131 1911 140 27 10 chr10 31996747 31997039 -108319726 - AluJo SINE Alu -15 297 1 761 233 112 109 chr10 31997039 31997147 -108319618 + LTR41 LTR ERVL 642 748 -25 24 0 0 0 chr10 31997502 31997526 -108319239 + AT_rich Low_complexity Low_complexity 1 24 0 2030 133 0 0 chr10 31997810 31998096 -108318669 + AluSx SINE Alu 11 296 -16 2140 109 3 7 chr10 31998175 31998460 -108318305 + AluSx SINE Alu 16 299 -13 440 127 0 0 chr10 31998526 31998589 -108318176 + AluS SINE Alu 1 63 -255 582 119 0 69 chr10 31998589 31998690 -108318075 + U6 snRNA snRNA 14 107 0 42 0 0 0 chr10 31998690 31998732 -108318033 + AT_rich Low_complexity Low_complexity 1 42 0 2129 141 47 81 chr10 31998872 31999319 -108317446 + MSTB1 LTR MaLR 1 432 0 257 277 14 78 chr10 31999356 31999497 -108317268 + HAL1b LINE L1 743 874 -474 2284 105 10 7 chr10 31999576 31999882 -108316883 + AluSx SINE Alu 1 307 -5 264 59 0 0 chr10 31999944 31999978 -108316787 + (TG)n Simple_repeat Simple_repeat 1 34 0 1012 195 41 32 chr10 32000201 32000422 -108316343 - MER58A DNA MER1_type -1 223 1 456 239 58 19 chr10 32000502 32000657 -108316108 + MER103 DNA DNA 3 163 -3 374 277 27 9 chr10 32000731 32000843 -108315922 - MIR3 SINE MIR -46 162 49 1831 141 57 10 chr10 32001358 32001656 -108315109 + AluJb SINE Alu 1 312 0 3172 194 63 57 chr10 32002534 32003435 -108313330 + Charlie5 DNA MER1_type 1 907 -1705 4735 167 36 39 chr10 32003438 32003631 -108313134 + Charlie5 DNA MER1_type 1555 1747 -877 2289 109 10 19 chr10 32003631 32003944 -108312821 + AluY SINE Alu 1 310 -1 4735 167 36 39 chr10 32003944 32004730 -108312035 + Charlie5 DNA MER1_type 1747 2532 -92 2387 78 0 3 chr10 32004730 32005024 -108311741 + AluSc SINE Alu 1 293 -16 4735 167 36 39 chr10 32005024 32005111 -108311654 + Charlie5 DNA MER1_type 2532 2618 -6 304 270 70 10 chr10 32005122 32005222 -108311543 + MER5A DNA MER1_type 4 109 -80 1625 228 132 32 chr10 32005277 32005513 -108311252 + L1MEc LINE L1 302 513 -5883 2129 142 7 0 chr10 32005513 32005822 -108310943 + AluSx SINE Alu 1 311 -1 1625 228 132 32 chr10 32005822 32005866 -108310899 + L1MEc LINE L1 513 551 -5845 852 100 77 8 chr10 32005866 32005996 -108310769 + MER85 DNA T2_type 1 139 0 1625 228 132 32 chr10 32005996 32006281 -108310484 + L1MEc LINE L1 551 925 -5471 1162 220 65 21 chr10 32006300 32006728 -108310037 + L1MEc LINE L1 996 1442 -4954 926 183 29 17 chr10 32006728 32006903 -108309862 + AluJo SINE Alu 118 294 -18 2568 213 64 86 chr10 32006906 32007541 -108309224 + L1MEc LINE L1 1454 2101 -4114 1922 155 3 3 chr10 32007541 32007831 -108308934 - AluSx SINE Alu -20 292 3 2568 213 64 86 chr10 32007831 32007923 -108308842 + L1MEc LINE L1 2101 2193 -4022 207 69 0 0 chr10 32007923 32007952 -108308813 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2568 213 64 86 chr10 32007952 32008443 -108308322 + L1MEc LINE L1 2193 2599 -3616 2119 114 50 3 chr10 32008640 32008938 -108307827 + AluSx SINE Alu 1 312 0 504 292 54 13 chr10 32009535 32009768 -108306997 + MIR SINE MIR 10 252 -10 1296 170 59 95 chr10 32009778 32010084 -108306681 + AluJo SINE Alu 6 300 -12 27 0 0 0 chr10 32010238 32010265 -108306500 + AT_rich Low_complexity Low_complexity 1 27 0 294 29 0 0 chr10 32011057 32011092 -108305673 + (CA)n Simple_repeat Simple_repeat 2 36 0 2284 108 0 22 chr10 32011426 32011740 -108305025 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr10 32012598 32012621 -108304144 + AT_rich Low_complexity Low_complexity 1 23 0 1913 164 0 0 chr10 32012621 32012908 -108303857 - AluJo SINE Alu -25 287 1 2235 106 0 0 chr10 32013151 32013443 -108303322 + AluSx SINE Alu 1 292 -20 204 137 98 59 chr10 32013608 32013659 -108303106 + L2 LINE L2 3165 3217 -96 732 179 8 0 chr10 32013995 32014118 -108302647 - FRAM SINE Alu -57 119 1 485 32 16 0 chr10 32016137 32016200 -108300565 + (TG)n Simple_repeat Simple_repeat 2 65 0 2454 98 0 0 chr10 32016240 32016547 -108300218 + AluSg SINE Alu 1 307 -3 1728 141 67 30 chr10 32016593 32016890 -108299875 + AluJo SINE Alu 1 308 -4 188 235 39 0 chr10 32017121 32017172 -108299593 + MIR SINE MIR 94 146 -116 491 247 64 89 chr10 32019889 32020010 -108296755 - MIR SINE MIR -2 260 146 1663 149 71 4 chr10 32020010 32020291 -108296474 - AluJo SINE Alu -12 300 1 491 247 64 89 chr10 32020291 32020404 -108296361 - MIR SINE MIR -116 146 32 268 174 0 0 chr10 32021151 32021197 -108295568 + MIR SINE MIR 104 149 -113 491 198 43 56 chr10 32024018 32024180 -108292585 - MER5A DNA MER1_type 0 189 30 188 235 29 44 chr10 32024124 32024192 -108292573 + MER5A DNA MER1_type 116 182 -7 * 1343 105 89 189 chr10 32024374 32024791 -108291974 - MLT1B LTR MaLR -12 384 2 2621 58 0 0 chr10 32024839 32025150 -108291615 + AluY SINE Alu 1 311 0 607 206 8 0 chr10 32025753 32025884 -108290881 - FLAM_C SINE Alu 0 133 2 472 191 0 187 chr10 32027027 32027148 -108289617 - MER112 DNA MER1_type -40 220 168 552 186 124 0 chr10 32027148 32027261 -108289504 + FLAM_A SINE Alu 2 128 -5 472 191 0 187 chr10 32027261 32027390 -108289375 - MER112 DNA MER1_type -92 168 17 25 0 0 0 chr10 32028252 32028277 -108288488 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr10 32028308 32028330 -108288435 + AT_rich Low_complexity Low_complexity 1 22 0 1702 161 61 84 chr10 32028701 32029143 -108287622 + MSTB1 LTR MaLR 1 432 0 2352 121 0 0 chr10 32029165 32029478 -108287287 - AluSq SINE Alu 0 313 1 1847 153 39 0 chr10 32029964 32030245 -108286520 - AluJo SINE Alu -20 292 1 274 297 187 0 chr10 32030391 32030546 -108286219 + MIR SINE MIR 79 262 0 2357 113 0 0 chr10 32030958 32031269 -108285496 - AluSx SINE Alu -1 311 1 2323 113 0 0 chr10 32031500 32031811 -108284954 + AluSx SINE Alu 1 311 -1 223 303 34 34 chr10 32032144 32032263 -108284502 - L3b LINE CR1 -216 1367 1249 2867 16 0 0 chr10 32032372 32032683 -108284082 + AluYa5 SINE Alu 1 311 0 2343 82 3 35 chr10 32033673 32033988 -108282777 - AluSq SINE Alu -8 305 1 378 0 0 0 chr10 32034054 32034096 -108282669 + (TG)n Simple_repeat Simple_repeat 1 42 0 258 32 0 0 chr10 32034401 32034432 -108282333 + (TA)n Simple_repeat Simple_repeat 2 32 0 1651 187 0 21 chr10 32034432 32034721 -108282044 - AluJb SINE Alu -16 296 14 797 239 201 26 chr10 32034754 32035102 -108281663 + MLT1I LTR MaLR 1 409 0 183 256 0 0 chr10 32035102 32035141 -108281624 - MIR SINE MIR -4 258 220 1613 187 64 124 chr10 32035461 32036011 -108280754 + LTR40a LTR ERVL 3 519 0 233 279 11 142 chr10 32037120 32037310 -108279455 - L2 LINE L2 -177 3095 2931 3382 197 94 22 chr10 32037353 32038207 -108278558 + L1MC4a LINE L1 6891 7805 -3 446 360 67 27 chr10 32038253 32038847 -108277918 - L2 LINE L2 -459 2855 2238 187 315 0 0 chr10 32039005 32039059 -108277706 - L2 LINE L2 -227 3045 2992 387 173 67 0 chr10 32039065 32039140 -108277625 - LTR23 LTR ERV1 0 437 358 698 162 68 16 chr10 32039202 32039393 -108277372 + L1ME1 LINE L1 3816 4016 -2130 750 163 77 61 chr10 32039548 32039794 -108276971 - LTR56 LTR ERV1 -120 325 76 272 83 21 0 chr10 32039794 32039842 -108276923 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 725 179 8 0 chr10 32039842 32039959 -108276806 - FLAM_C SINE Alu -19 124 7 319 41 41 0 chr10 32040818 32040867 -108275898 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 1048 212 28 25 chr10 32041199 32041555 -108275210 + L1ME1 LINE L1 4362 4919 -1227 3123 202 67 37 chr10 32041567 32041665 -108275100 + L1ME1 LINE L1 5225 5319 -847 2353 80 17 3 chr10 32041665 32041966 -108274799 + AluSg SINE Alu 1 305 -5 3123 202 67 37 chr10 32041966 32042090 -108274675 + L1ME1 LINE L1 5319 5438 -728 5120 117 23 12 chr10 32042090 32042860 -108273905 + MER4E LTR ERV1 1 779 0 3123 202 67 37 chr10 32042860 32043504 -108273261 + L1ME1 LINE L1 5438 6115 -51 1310 164 91 46 chr10 32043504 32043767 -108272998 - AluJo SINE Alu -19 293 19 1034 227 52 46 chr10 32045255 32045367 -108271398 - MLT1C LTR MaLR 0 467 357 1525 176 64 0 chr10 32045367 32045477 -108271288 + AluJo SINE Alu 1 103 -209 2289 64 0 0 chr10 32045477 32045742 -108271023 + AluSc SINE Alu 13 277 -32 389 36 0 18 chr10 32045745 32045801 -108270964 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1525 176 64 0 chr10 32045801 32045953 -108270812 + AluJo SINE Alu 104 284 -28 1034 227 52 46 chr10 32045953 32046342 -108270423 - MLT1C LTR MaLR -110 357 6 316 264 104 8 chr10 32046347 32046472 -108270293 - MIR SINE MIR -60 202 66 1695 133 16 67 chr10 32046541 32046856 -108269909 + AluSx SINE Alu 1 299 -13 1085 133 0 0 chr10 32047433 32047606 -108269159 - AluSq SINE Alu 0 305 133 2151 112 3 0 chr10 32047607 32047894 -108268871 - AluSx SINE Alu -24 288 1 1851 160 0 3 chr10 32048159 32048447 -108268318 + AluSx SINE Alu 1 287 -25 204 97 0 0 chr10 32048449 32048480 -108268285 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2629 144 76 11 chr10 32048488 32048946 -108267819 - LTR45B LTR ERV1 0 489 2 2089 120 30 13 chr10 32049026 32049325 -108267440 + AluSg SINE Alu 1 304 -6 2250 96 20 0 chr10 32049407 32049700 -108267065 - AluSq SINE Alu -14 299 1 393 258 83 50 chr10 32050384 32050661 -108266104 - L1MC4a LINE L1 -11 6110 5811 2071 119 6 10 chr10 32050661 32050972 -108265793 - AluSx SINE Alu -2 310 1 393 258 83 50 chr10 32050972 32051133 -108265632 - L1MC4a LINE L1 -310 5811 5657 1770 170 3 3 chr10 32051163 32051451 -108265314 - AluJb SINE Alu -24 288 1 2223 132 0 0 chr10 32051579 32051890 -108264875 - AluSq SINE Alu -2 311 1 499 275 122 13 chr10 32052823 32053052 -108263713 + MIR SINE MIR 1 254 -8 550 293 63 66 chr10 32053800 32054335 -108262430 + L1MC4 LINE L1 7334 7973 -69 2750 112 13 74 chr10 32054720 32055039 -108261726 + MER65A LTR ERV1 1 283 -162 2142 108 0 3 chr10 32055039 32055326 -108261439 + AluSg SINE Alu 22 307 -3 2750 112 13 74 chr10 32055326 32055480 -108261285 + MER65A LTR ERV1 283 445 0 7643 36 0 0 chr10 32055796 32056713 -108260052 - L1PA5 LINE L1 -5 6149 5232 2064 132 0 11 chr10 32057046 32057400 -108259365 + AluSx SINE Alu 1 351 0 1690 178 3 23 chr10 32057421 32057724 -108259041 - AluJo SINE Alu -10 302 6 2165 115 0 10 chr10 32058399 32058703 -108258062 + AluSc SINE Alu 1 301 -8 1550 160 167 14 chr10 32058913 32059207 -108257558 - MER1B DNA MER1_type 0 339 1 519 45 0 0 chr10 32059635 32059701 -108257064 + (GA)n Simple_repeat Simple_repeat 1 66 0 1534 260 63 5 chr10 32060078 32060493 -108256272 - LTR16C LTR ERVL 0 491 53 2238 136 0 0 chr10 32060769 32061079 -108255686 + AluSx SINE Alu 1 310 -2 243 88 0 0 chr10 32061141 32061175 -108255590 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 471 357 23 23 chr10 32061440 32061706 -108255059 - HAL1 LINE L1 -1260 1247 982 2288 82 36 13 chr10 32061891 32062196 -108254569 - AluSq SINE Alu -1 312 1 2175 78 3 7 chr10 32062276 32062559 -108254206 - AluY SINE Alu -29 282 1 592 266 111 24 chr10 32062601 32062808 -108253957 + MIR SINE MIR 38 262 0 7144 90 18 2 chr10 32063035 32064477 -108252288 + L1PA8A LINE L1 4293 5756 -375 3754 90 2 10 chr10 32064530 32065051 -108251714 + L1PA10 LINE L1 5642 6158 -10 985 178 37 5 chr10 32065084 32065275 -108251490 - MLT1D LTR MaLR -308 197 1 639 147 0 0 chr10 32066003 32066098 -108250667 + FLAM_C SINE Alu 31 125 -18 1657 155 11 11 chr10 32066432 32066710 -108250055 + AluJo SINE Alu 1 278 -34 2451 82 0 3 chr10 32068336 32068642 -108248123 - AluSx SINE Alu -7 305 1 327 176 47 47 chr10 32069084 32069169 -108247596 - MLT1K LTR MaLR -39 549 465 2484 74 0 10 chr10 32069761 32070070 -108246695 + AluY SINE Alu 1 306 -5 2179 117 10 7 chr10 32070930 32071239 -108245526 + AluSx SINE Alu 1 310 -2 1072 146 6 0 chr10 32071244 32071402 -108245363 + FRAM SINE Alu 4 162 -14 208 0 62 0 chr10 32071853 32071885 -108244880 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 6461 72 25 55 chr10 32072724 32073703 -108243062 - SVA Other Other -4 1382 433 5747 82 20 53 chr10 32073718 32074612 -108242153 - SVA Other Other -520 866 2 190 111 0 37 chr10 32074613 32074667 -108242098 + (GGGAGA)n Simple_repeat Simple_repeat 1 52 0 2269 106 7 0 chr10 32074809 32075110 -108241655 - AluSx SINE Alu -7 305 3 900 102 6 113 chr10 32075123 32075300 -108241465 - L1PB3 LINE L1 -1 6153 5996 1859 153 46 0 chr10 32075829 32076110 -108240655 + AluSx SINE Alu 1 294 -18 1283 142 52 78 chr10 32076163 32076431 -108240334 - AluJo SINE Alu -19 293 33 351 119 0 0 chr10 32076588 32076655 -108240110 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 32077294 32077501 -108239264 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 32077505 32077633 -108239132 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 32077785 32077916 -108238849 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 32077920 32077979 -108238786 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 32078027 32078221 -108238544 - MIR SINE MIR 0 262 49 2651 40 0 0 chr10 32079065 32079363 -108237402 + AluY SINE Alu 1 298 -13 38 22 0 0 chr10 32079942 32079987 -108236778 + AT_rich Low_complexity Low_complexity 1 45 0 2324 98 0 3 chr10 32080992 32081297 -108235468 + AluSg SINE Alu 1 304 -6 437 259 136 7 chr10 32081306 32081453 -108235312 + MIR3 SINE MIR 37 202 -6 3666 115 72 36 chr10 32082667 32082882 -108233883 - LTR34 LTR ERV1 0 699 493 1675 151 70 7 chr10 32082882 32083166 -108233599 - AluSx SINE Alu -10 302 1 3666 115 72 36 chr10 32083166 32083612 -108233153 - LTR34 LTR ERV1 -206 493 14 370 256 78 23 chr10 32084540 32084669 -108232096 + L3 LINE CR1 1321 1456 -121 1102 113 40 17 chr10 32084674 32084851 -108231914 + MER4D LTR ERV1 1 181 -722 5352 124 12 10 chr10 32084851 32085657 -108231108 + L1PA15 LINE L1 5350 6157 -8 3355 142 65 73 chr10 32085657 32086353 -108230412 + MER4D LTR ERV1 183 872 0 3151 120 8 112 chr10 32086968 32087609 -108229156 + MER4B LTR ERV1 1 574 -36 479 237 0 52 chr10 32088047 32088182 -108228583 + L2 LINE L2 3180 3307 -6 200 182 0 0 chr10 32089089 32089122 -108227643 + CT-rich Low_complexity Low_complexity 2 34 0 393 22 0 0 chr10 32089125 32089171 -108227594 + (CA)n Simple_repeat Simple_repeat 2 47 0 2367 112 0 0 chr10 32089637 32089941 -108226824 - AluSx SINE Alu -8 304 1 181 296 57 23 chr10 32090180 32090268 -108226497 + L2 LINE L2 2954 3044 -228 1637 179 14 21 chr10 32090392 32090677 -108226088 - AluJo SINE Alu -29 283 1 391 169 48 0 chr10 32090682 32090765 -108226000 - L1PA16 LINE L1 -1 6165 6079 1052 156 0 11 chr10 32090855 32091034 -108225731 + AluJb SINE Alu 134 310 -2 206 31 0 31 chr10 32091346 32091378 -108225387 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2111 111 4 0 chr10 32091378 32091657 -108225108 - AluSx SINE Alu -32 280 1 3724 111 23 6 chr10 32092002 32092517 -108224248 + MER1A DNA MER1_type 4 527 0 1604 152 17 52 chr10 32092861 32093150 -108223615 + AluJo SINE Alu 2 280 -32 3422 105 8 10 chr10 32094272 32094766 -108221999 - LOR1a LTR ERV1 0 497 5 1375 225 37 34 chr10 32095064 32095362 -108221403 - AluJo SINE Alu -2 300 2 2043 185 50 46 chr10 32095457 32095960 -108220805 + MLT1D LTR MaLR 1 505 0 206 266 78 0 chr10 32096114 32096178 -108220587 + L2 LINE L2 3208 3276 -37 1733 170 17 17 chr10 32096243 32096532 -108220233 - AluJb SINE Alu -23 289 1 1785 121 83 78 chr10 32096776 32096975 -108219790 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 32096975 32097000 -108219765 + (TC)n Simple_repeat Simple_repeat 1 25 0 1785 121 83 78 chr10 32097000 32097173 -108219592 + THE1C LTR MaLR 204 375 0 2079 128 0 0 chr10 32097367 32097680 -108219085 + AluSx SINE Alu 1 313 0 244 360 84 27 chr10 32097682 32097943 -108218822 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 32097943 32097993 -108218772 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 32098001 32098023 -108218742 + AT_rich Low_complexity Low_complexity 1 22 0 694 169 8 0 chr10 32098078 32098196 -108218569 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 32098251 32098467 -108218298 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 32100440 32100744 -108216021 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 32100889 32101631 -108215134 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 32101804 32102099 -108214666 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 32102323 32102378 -108214387 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 32102651 32102707 -108214058 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 32102707 32103008 -108213757 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 32103008 32103602 -108213163 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 32103604 32103685 -108213080 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 32103685 32103741 -108213024 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 32104358 32104564 -108212201 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 32104751 32105064 -108211701 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 32105326 32105607 -108211158 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 32105840 32105901 -108210864 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1791 102 124 0 chr10 32106926 32107191 -108209574 + AluSx SINE Alu 5 302 0 1935 144 0 7 chr10 32107465 32107749 -108209016 - AluJo SINE Alu -30 282 1 216 0 0 0 chr10 32107777 32107801 -108208964 + (TG)n Simple_repeat Simple_repeat 2 25 0 191 303 0 15 chr10 32108297 32108363 -108208402 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 32108616 32108750 -108208015 + FLAM_C SINE Alu 1 133 0 2367 94 0 0 chr10 32109395 32109693 -108207072 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 32109976 32110250 -108206515 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 32110250 32110543 -108206222 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 32111798 32112105 -108204660 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 32113056 32113091 -108203674 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 32113291 32113358 -108203407 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 32113436 32113616 -108203149 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 32113696 32114150 -108202615 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 32114341 32114411 -108202354 + L1MB8 LINE L1 3909 3987 -2159 2025 114 40 3 chr10 32114411 32114709 -108202056 + AluSc SINE Alu 1 309 0 898 180 4 146 chr10 32114709 32114884 -108201881 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 32114884 32114907 -108201858 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 32114907 32115486 -108201279 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 32115486 32116018 -108200747 + MLT2B3 LTR ERVL 23 554 0 4566 192 56 37 chr10 32116020 32117074 -108199691 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 32117074 32117454 -108199311 - MSTA LTR MaLR 0 428 1 786 139 23 8 chr10 32117454 32117583 -108199182 + FLAM_C SINE Alu 1 131 -2 4566 192 56 37 chr10 32117583 32118540 -108198225 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 32118545 32118577 -108198188 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 284 209 48 chr10 32118603 32118934 -108197831 - L2 LINE L2 -799 2515 2239 315 0 0 0 chr10 32118934 32118969 -108197796 + (GA)n Simple_repeat Simple_repeat 2 36 0 568 284 209 48 chr10 32118969 32119282 -108197483 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 32119656 32119907 -108196858 - AluJo SINE Alu -25 287 14 2168 172 34 3 chr10 32120439 32120823 -108195942 - MSTD LTR MaLR 0 396 1 1564 169 0 69 chr10 32121411 32121730 -108195035 - AluJo SINE Alu -15 297 1 2230 138 25 30 chr10 32122524 32122923 -108193842 - L1MB4 LINE L1 -2 6178 5782 1645 129 75 0 chr10 32123837 32124092 -108192673 + AluJb SINE Alu 11 284 -28 201 39 0 0 chr10 32124092 32124118 -108192647 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1570 155 3 73 chr10 32124417 32124720 -108192045 - AluJo SINE Alu -22 290 9 2313 71 0 4 chr10 32125294 32125619 -108191146 - AluY SINE Alu 0 324 1 213 94 0 0 chr10 32126575 32126607 -108190158 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1488 195 18 18 chr10 32126609 32126891 -108189874 - AluJo SINE Alu -30 282 1 2030 39 9 0 chr10 32126905 32127135 -108189630 - AluY SINE Alu -14 297 66 458 238 43 49 chr10 32127692 32127856 -108188909 + MIR SINE MIR 100 262 0 1095 74 0 29 chr10 32127891 32128066 -108188699 + (TTTC)n Simple_repeat Simple_repeat 3 172 0 1594 172 8 11 chr10 32128071 32128333 -108188432 - AluJo SINE Alu -39 273 13 2073 128 3 0 chr10 32128648 32128938 -108187827 + AluSx SINE Alu 1 291 -21 496 213 86 75 chr10 32128994 32129168 -108187597 + MLT1C LTR MaLR 7 182 -285 180 0 0 0 chr10 32129310 32129330 -108187435 + (CAT)n Simple_repeat Simple_repeat 2 21 0 395 294 14 46 chr10 32129434 32129652 -108187113 + L1MC5 LINE L1 7010 7220 -741 511 298 57 20 chr10 32129786 32130135 -108186630 + L1MC5 LINE L1 7272 7633 -328 420 147 0 0 chr10 32130174 32130242 -108186523 - MIR SINE MIR -174 88 21 233 188 62 31 chr10 32130260 32130324 -108186441 + MIR SINE MIR 124 189 -73 229 315 34 0 chr10 32130987 32131076 -108185689 + L1MC4 LINE L1 7781 7872 -170 1572 193 7 10 chr10 32131163 32131459 -108185306 + AluJo SINE Alu 13 307 -5 349 326 49 21 chr10 32131894 32132038 -108184727 + MLT1I LTR MaLR 9 156 -253 679 150 32 0 chr10 32132122 32132382 -108184383 + CT-rich Low_complexity Low_complexity 1 268 0 267 122 41 0 chr10 32132385 32132434 -108184331 + MLT1I LTR MaLR 345 395 -14 614 279 14 19 chr10 32132573 32132781 -108183984 - MIR SINE MIR -55 207 1 447 308 27 0 chr10 32133305 32133451 -108183314 - MIR SINE MIR -75 187 38 1698 159 16 29 chr10 32133989 32134217 -108182548 + AluJo SINE Alu 1 230 -82 2375 115 62 3 chr10 32134217 32134573 -108182192 - MER51B LTR ERV1 0 377 1 1698 159 16 29 chr10 32134573 32134642 -108182123 + AluJo SINE Alu 230 296 -16 2684 48 0 0 chr10 32134642 32134951 -108181814 + AluY SINE Alu 1 309 -2 1698 159 16 29 chr10 32134951 32134967 -108181798 + AluJo SINE Alu 296 311 -1 23 0 0 0 chr10 32135560 32135583 -108181182 + AT_rich Low_complexity Low_complexity 1 23 0 358 277 28 68 chr10 32135585 32135762 -108181003 - L1MC5 LINE L1 -48 7913 7744 2077 95 81 0 chr10 32136585 32136869 -108179896 + AluSq SINE Alu 1 307 -6 8803 200 58 36 chr10 32137485 32137757 -108179008 + L1MDa LINE L1 25 289 -6251 857 122 0 30 chr10 32137757 32137888 -108178877 + FLAM_C SINE Alu 5 131 -2 8803 200 58 36 chr10 32137888 32139616 -108177149 + L1MDa LINE L1 289 2253 -4287 1536 200 3 32 chr10 32139616 32139931 -108176834 + AluJo SINE Alu 2 307 -5 8803 200 58 36 chr10 32139931 32140656 -108176109 + L1MDa LINE L1 2253 2960 -3580 431 272 16 0 chr10 32140661 32140786 -108175979 - L1M4 LINE L1 -3070 3076 2950 2448 182 8 45 chr10 32140803 32141319 -108175446 + L1MD1 LINE L1 5746 6242 0 882 143 7 0 chr10 32141327 32141467 -108175298 + FAM SINE Alu 18 158 -27 28 29 0 0 chr10 32141471 32141506 -108175259 + AT_rich Low_complexity Low_complexity 1 35 0 192 216 78 20 chr10 32141867 32141918 -108174847 - L3 LINE CR1 -262 1315 1262 256 268 52 41 chr10 32142052 32142149 -108174616 + L2 LINE L2 2986 3083 -189 202 255 20 39 chr10 32142247 32142264 -108174501 + L2 LINE L2 3197 3213 -59 576 201 214 0 chr10 32142264 32142418 -108174347 + MER5A DNA MER1_type 3 189 0 202 255 20 39 chr10 32142418 32142451 -108174314 + L2 LINE L2 3213 3246 -26 1934 128 30 3 chr10 32142840 32143144 -108173621 + AluSx SINE Alu 1 312 0 1843 141 0 3 chr10 32143167 32143451 -108173314 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr10 32143454 32143485 -108173280 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1618 180 10 10 chr10 32144173 32144468 -108172297 - AluJo SINE Alu -13 299 5 2163 103 3 0 chr10 32145087 32145388 -108171377 + AluSg SINE Alu 1 302 -8 257 51 26 0 chr10 32145479 32145518 -108171247 + (GA)n Simple_repeat Simple_repeat 2 41 0 401 341 22 0 chr10 32146706 32146841 -108169924 + MIR3 SINE MIR 64 201 -7 546 302 112 6 chr10 32147166 32147345 -108169420 - MIR SINE MIR -10 252 55 208 308 46 0 chr10 32147417 32147482 -108169283 + L2 LINE L2 2717 2784 -530 269 274 110 122 chr10 32147532 32147617 -108169148 + L2 LINE L2 2945 3030 -242 1312 200 7 122 chr10 32147617 32148027 -108168738 + MLT1A1 LTR MaLR 3 365 0 269 274 110 122 chr10 32148027 32148269 -108168496 + L2 LINE L2 3030 3268 -4 2170 97 0 0 chr10 32148621 32148910 -108167855 - AluSg1 SINE Alu -18 291 3 370 140 0 0 chr10 32149110 32149167 -108167598 + FLAM SINE Alu 76 132 -1 272 287 153 7 chr10 32149781 32149931 -108166834 - MIR3 SINE MIR -7 201 30 23 0 0 0 chr10 32150155 32150178 -108166587 + AT_rich Low_complexity Low_complexity 1 23 0 1759 128 0 75 chr10 32150181 32150501 -108166264 + AluSx SINE Alu 1 296 -16 591 249 37 16 chr10 32151000 32151189 -108165576 + L1MC/D LINE L1 5569 5761 -2047 * 1735 130 0 4 chr10 32151186 32151448 -108165317 - MSTA-int LTR MaLR -1390 261 1 2104 148 65 32 chr10 32151450 32151807 -108164958 - MSTA LTR MaLR -2 426 52 1696 189 3 0 chr10 32151807 32152108 -108164657 - AluJo SINE Alu -10 302 1 2104 148 65 32 chr10 32152108 32152162 -108164603 - MSTA LTR MaLR -376 52 1 1540 280 48 46 chr10 32152162 32152745 -108164020 - L2 LINE L2 -445 2869 2286 556 261 71 114 chr10 32152784 32152798 -108163967 - MLT1J LTR MaLR -8 503 490 2504 104 11 8 chr10 32152798 32153152 -108163613 + THE1A LTR MaLR 1 355 0 556 261 71 114 chr10 32153152 32153470 -108163295 - MLT1J LTR MaLR -21 490 190 1862 154 0 0 chr10 32153470 32153763 -108163002 - AluJo SINE Alu -4 308 16 556 261 71 114 chr10 32153763 32153851 -108162914 - MLT1J LTR MaLR -321 190 100 199 277 43 0 chr10 32153922 32153969 -108162796 - L2 LINE L2 -1078 2236 2188 211 270 27 14 chr10 32154271 32154345 -108162420 + GA-rich Low_complexity Low_complexity 1 75 0 1821 163 13 56 chr10 32155408 32155800 -108160965 + THE1C LTR MaLR 1 375 0 619 312 28 0 chr10 32155803 32156053 -108160712 - L1MC4 LINE L1 -981 7061 6805 1984 113 0 64 chr10 32157878 32158205 -108158560 - AluSq SINE Alu -7 306 1 2154 102 0 0 chr10 32158727 32159058 -108157707 + AluSx SINE Alu 1 331 0 431 294 154 21 chr10 32159522 32159654 -108157111 - L2 LINE L2 -134 3179 3066 2182 93 7 7 chr10 32159654 32159955 -108156810 - AluSx SINE Alu -11 301 1 431 294 154 21 chr10 32159955 32160256 -108156509 - L2 LINE L2 -247 3066 2806 1597 176 7 23 chr10 32160256 32160558 -108156207 + AluJo SINE Alu 4 300 -12 1819 123 87 0 chr10 32160558 32160834 -108155931 + AluSx SINE Alu 1 300 -12 431 294 154 21 chr10 32160834 32160943 -108155822 - L2 LINE L2 -506 2807 2554 267 157 50 0 chr10 32161024 32161135 -108155630 + CT-rich Low_complexity Low_complexity 1 116 0 927 277 131 56 chr10 32161158 32161212 -108155553 - L2 LINE L2 -918 2396 2347 505 278 5 97 chr10 32161212 32161428 -108155337 - MER91A DNA MER1_type 0 196 1 927 277 131 56 chr10 32161428 32161594 -108155171 - L2 LINE L2 -967 2347 2195 2186 103 0 13 chr10 32161594 32161906 -108154859 - AluSc SINE Alu 0 309 2 927 277 131 56 chr10 32161906 32162417 -108154348 - L2 LINE L2 -1119 2195 1609 232 235 265 0 chr10 32162435 32162605 -108154160 - L2 LINE L2 -1811 1503 1289 195 69 0 0 chr10 32162786 32162815 -108153950 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 186 270 16 16 chr10 32163017 32163080 -108153685 - MIR SINE MIR -21 241 179 252 285 70 12 chr10 32163216 32163388 -108153377 + L1ME4a LINE L1 5269 5450 -712 1039 99 0 52 chr10 32163461 32163633 -108153132 - AluSg/x SINE Alu -16 294 132 395 273 150 31 chr10 32163633 32163881 -108152884 + L1ME4a LINE L1 5549 5766 -355 1465 196 32 54 chr10 32163881 32164254 -108152511 + MLT1A1 LTR MaLR 1 365 0 395 273 150 31 chr10 32164254 32164517 -108152248 + L1ME4a LINE L1 5766 6121 0 1170 171 5 0 chr10 32164542 32164735 -108152030 - AluJo SINE Alu -118 194 1 224 207 103 69 chr10 32164983 32165070 -108151695 + L2 LINE L2 3183 3272 0 275 236 144 109 chr10 32165162 32165336 -108151429 + MER5A DNA MER1_type 10 189 0 2146 119 0 0 chr10 32165362 32165656 -108151109 - AluSx SINE Alu -18 294 1 224 39 0 0 chr10 32165828 32165854 -108150911 + (T)n Simple_repeat Simple_repeat 1 26 0 357 203 27 0 chr10 32166739 32166813 -108149952 - MER34 LTR ERV1 -22 520 445 230 192 77 0 chr10 32166825 32166877 -108149888 - LTR48 LTR ERV1 -118 669 614 338 258 39 45 chr10 32166917 32167072 -108149693 - LTR48B LTR ERV1 -350 294 141 * 410 261 8 25 chr10 32167051 32167170 -108149595 - MER34 LTR ERV1 -423 119 3 308 83 21 0 chr10 32167309 32167357 -108149408 + (TC)n Simple_repeat Simple_repeat 1 49 0 1895 134 40 0 chr10 32167357 32167656 -108149109 - AluSx SINE Alu -1 311 1 393 320 63 40 chr10 32167978 32168200 -108148565 + MIR SINE MIR 2 228 -34 2030 105 0 20 chr10 32168286 32168582 -108148183 - AluSx SINE Alu -22 290 1 1727 155 10 13 chr10 32169371 32169675 -108147090 + AluJo SINE Alu 1 303 -9 2091 125 0 0 chr10 32169968 32170280 -108146485 + AluSx SINE Alu 1 312 0 636 278 44 31 chr10 32172304 32172531 -108144234 + MLT1H LTR MaLR 2 231 -318 356 277 57 34 chr10 32172649 32172826 -108143939 - MLT1G LTR MaLR 0 590 410 331 265 34 26 chr10 32173012 32173129 -108143636 - MLT1G LTR MaLR -462 128 11 1957 138 0 3 chr10 32173285 32173615 -108143150 + AluSx SINE Alu 1 329 0 2235 165 41 13 chr10 32174101 32174562 -108142203 - MER101 LTR ERV1 0 474 1 478 217 0 57 chr10 32174579 32174685 -108142080 - L1M3 LINE L1 -400 5783 5684 797 285 88 40 chr10 32175004 32175577 -108141188 + MLT1G LTR MaLR 17 590 0 1370 263 25 28 chr10 32175816 32176173 -108140592 - MER115 DNA AcHobo 0 693 338 565 230 35 67 chr10 32176345 32176570 -108140195 - MER77 LTR ERV1 -4 601 414 33 0 0 0 chr10 32176720 32176753 -108140012 + AT_rich Low_complexity Low_complexity 1 33 0 1936 107 0 0 chr10 32177376 32177648 -108139117 + AluSq SINE Alu 31 302 -11 1676 153 4 14 chr10 32177814 32178095 -108138670 - AluJb SINE Alu -34 278 1 367 300 8 39 chr10 32178096 32178226 -108138539 - MIR SINE MIR -9 253 128 306 170 0 0 chr10 32178300 32178353 -108138412 - L2 LINE L2 0 3313 3261 379 268 115 129 chr10 32178721 32179139 -108137626 - L3 LINE CR1 -22 1555 1144 1045 168 0 0 chr10 32179490 32179657 -108137108 - AluJb SINE Alu -18 294 128 2167 104 10 0 chr10 32179797 32180094 -108136671 - AluSx SINE Alu -12 300 1 614 274 58 53 chr10 32180191 32180417 -108136348 + MER115 DNA AcHobo 338 564 -129 2025 117 9 27 chr10 32180464 32180798 -108135967 - L1PA14 LINE L1 0 6161 5834 772 200 0 0 chr10 32180824 32180978 -108135787 - FLAM_C SINE Alu 0 157 4 21 0 0 0 chr10 32181179 32181200 -108135565 + AT_rich Low_complexity Low_complexity 1 21 0 2209 88 7 0 chr10 32181297 32181603 -108135162 + AluY SINE Alu 1 308 -3 194 143 18 125 chr10 32181605 32181661 -108135104 - L3b LINE CR1 -10 1573 1524 292 231 30 127 chr10 32181939 32182073 -108134692 - MIR SINE MIR -79 183 63 484 106 39 7 chr10 32182908 32183126 -108133639 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 579 144 50 9 chr10 32183162 32183388 -108133377 + (TCCA)n Simple_repeat Simple_repeat 1 235 0 673 133 38 14 chr10 32183410 32183707 -108133058 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 195 343 14 14 chr10 32183716 32183786 -108132979 - MIR SINE MIR -105 157 88 937 206 161 0 chr10 32184691 32184934 -108131831 + AluSx SINE Alu 1 282 -30 347 0 0 23 chr10 32184938 32184982 -108131783 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 614 189 18 0 chr10 32185037 32185148 -108131617 - MER81 DNA DNA 0 114 2 385 253 156 13 chr10 32186719 32186830 -108129935 - MIR SINE MIR -1 261 121 1539 192 4 4 chr10 32186830 32187111 -108129654 - AluJb SINE Alu -19 293 13 385 253 156 13 chr10 32187111 32187153 -108129612 - MIR SINE MIR -141 121 86 266 309 164 14 chr10 32187187 32187407 -108129358 - L3b LINE CR1 -152 1431 1179 26 30 0 0 chr10 32187972 32188005 -108128760 + AT_rich Low_complexity Low_complexity 1 33 0 311 394 0 8 chr10 32188908 32189040 -108127725 + L2 LINE L2 3142 3272 0 769 257 87 9 chr10 32189143 32189361 -108127404 + MIR SINE MIR 22 256 -6 356 0 0 22 chr10 32191508 32191553 -108125212 + (TAA)n Simple_repeat Simple_repeat 2 45 0 257 245 0 0 chr10 32192173 32192226 -108124539 - L1MC5 LINE L1 -1188 6773 6721 254 290 0 0 chr10 32192956 32193025 -108123740 + MIR SINE MIR 187 255 -7 1817 184 13 0 chr10 32193241 32193546 -108123219 + AluJo SINE Alu 1 309 -3 563 228 60 48 chr10 32195144 32195311 -108121454 - MER69A DNA AcHobo -8 169 1 784 140 15 37 chr10 32195929 32196065 -108120700 - FLAM_C SINE Alu 0 133 1 360 264 47 0 chr10 32196521 32196627 -108120138 - MER103 DNA DNA -1 165 55 2189 118 6 10 chr10 32196634 32196947 -108119818 + AluSx SINE Alu 1 312 0 252 327 99 19 chr10 32197537 32197575 -108119190 - MIR SINE MIR -70 192 158 3566 60 4 2 chr10 32197575 32198026 -108118739 - L1PA13 LINE L1 -3 6160 5709 252 327 99 19 chr10 32198026 32198151 -108118614 - MIR SINE MIR -104 158 19 468 252 77 19 chr10 32199753 32199908 -108116857 + LTR37B LTR ERV1 6 169 -299 967 134 47 6 chr10 32199910 32200081 -108116684 + L1MA5 LINE L1 6059 6236 -64 887 160 13 0 chr10 32200081 32200231 -108116534 + MSTB1 LTR MaLR 1 152 -274 1603 137 72 12 chr10 32200338 32200638 -108116127 + MSTB1 LTR MaLR 130 432 0 408 94 31 0 chr10 32200638 32200702 -108116063 + L1MA5 LINE L1 6230 6295 -5 590 223 93 40 chr10 32200777 32201024 -108115741 + LTR37B LTR ERV1 198 457 -11 624 235 65 0 chr10 32202007 32202177 -108114588 + L1PB4 LINE L1 5976 6156 0 1914 167 7 0 chr10 32202268 32202568 -108114197 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr10 32203126 32203161 -108113604 + AT_rich Low_complexity Low_complexity 1 35 0 393 194 15 0 chr10 32203162 32203229 -108113536 + MER45 DNA AcHobo 1513 1580 -1 2222 114 3 19 chr10 32204256 32204573 -108112192 - AluSx SINE Alu 0 312 1 373 294 56 20 chr10 32204652 32204849 -108111916 + MER31-int LTR ERV1 3855 4058 -878 1767 176 58 6 chr10 32205194 32205524 -108111241 + MLT1A1 LTR MaLR 19 365 0 823 205 72 85 chr10 32205524 32205855 -108110910 + LTR37B LTR ERV1 92 418 -50 1912 161 0 7 chr10 32205857 32206155 -108110610 - AluJo SINE Alu -16 296 1 5855 184 37 6 chr10 32206411 32207664 -108109101 - L1 LINE L1 -1715 4431 3140 2140 81 36 32 chr10 32207787 32208096 -108108669 - AluSg SINE Alu 0 310 1 1080 239 11 11 chr10 32209186 32209446 -108107319 - MIR SINE MIR 0 262 3 210 345 0 0 chr10 32209470 32209525 -108107240 + L2 LINE L2 3251 3305 -8 951 233 43 0 chr10 32210355 32210565 -108106200 + MER58A DNA MER1_type 2 220 -4 259 126 0 0 chr10 32212311 32212350 -108104415 + AluSp SINE Alu 137 170 -133 1608 167 24 20 chr10 32212355 32212648 -108104117 + AluJo SINE Alu 15 308 -4 379 315 95 45 chr10 32213695 32214054 -108102711 - L2 LINE L2 -571 2743 2367 1079 141 18 12 chr10 32214307 32214477 -108102288 + AluJb SINE Alu 126 296 -16 265 302 63 50 chr10 32214818 32214977 -108101788 + MLT1K LTR MaLR 198 358 -230 3802 177 43 55 chr10 32215165 32215463 -108101302 - L1MB7 LINE L1 -15 6169 5869 2239 193 39 55 chr10 32215463 32215504 -108101261 - MLT2B3 LTR ERVL 0 554 514 351 0 0 0 chr10 32215504 32215543 -108101222 + (TA)n Simple_repeat Simple_repeat 2 40 0 2239 193 39 55 chr10 32215543 32216062 -108100703 - MLT2B3 LTR ERVL -40 514 3 3802 177 43 55 chr10 32216062 32216968 -108099797 - L1MB7 LINE L1 -315 5869 4973 411 254 16 8 chr10 32217094 32217216 -108099549 - MER103 DNA DNA -10 156 34 1204 304 68 2 chr10 32217261 32217573 -108099192 + LTR16A LTR ERVL 25 370 -80 573 15 0 0 chr10 32217573 32217639 -108099126 + (TTCCC)n Simple_repeat Simple_repeat 1 66 0 1204 304 68 2 chr10 32217639 32217721 -108099044 + LTR16A LTR ERVL 370 445 -5 465 269 0 0 chr10 32218015 32218123 -108098642 + L2 LINE L2 3201 3308 -5 1006 105 7 20 chr10 32218369 32218522 -108098243 - AluSg/x SINE Alu -13 297 147 316 208 26 52 chr10 32218625 32218702 -108098063 - MER20 DNA MER1_type -142 77 3 921 222 124 50 chr10 32218785 32219167 -108097598 - MLT1G LTR MaLR 0 530 129 2086 137 10 0 chr10 32219176 32219475 -108097290 - AluSx SINE Alu -10 302 1 1970 92 81 18 chr10 32220101 32220374 -108096391 - AluSx SINE Alu -22 290 1 2064 128 0 41 chr10 32220502 32220821 -108095944 - AluSx SINE Alu -6 306 1 814 173 27 129 chr10 32221223 32221518 -108095247 + MER33 DNA MER1_type 6 270 -54 333 174 14 0 chr10 32221558 32221627 -108095138 + MER33 DNA MER1_type 272 341 -22 204 260 0 0 chr10 32221985 32222035 -108094730 - L2 LINE L2 -1 3312 3263 554 233 171 29 chr10 32223042 32223351 -108093414 - L1MC4 LINE L1 0 8042 7690 216 0 0 0 chr10 32223406 32223430 -108093335 + (T)n Simple_repeat Simple_repeat 1 24 0 739 225 7 0 chr10 32223478 32223629 -108093136 + MER34 LTR ERV1 1 152 -390 2169 141 0 0 chr10 32223629 32223928 -108092837 + AluSq SINE Alu 1 299 -14 1151 108 0 0 chr10 32223930 32224105 -108092660 + AluSq SINE Alu 139 313 0 490 121 52 69 chr10 32224117 32224233 -108092532 - L1ME1 LINE L1 -146 6020 5907 254 240 20 0 chr10 32225159 32225209 -108091556 + MER5A DNA MER1_type 1 51 -138 1187 232 111 24 chr10 32225211 32225709 -108091056 - MLT1F LTR MaLR -2 540 9 597 177 24 0 chr10 32225725 32225849 -108090916 + MER5A DNA MER1_type 61 187 -2 1032 184 63 16 chr10 32226001 32226416 -108090349 + MLT1D LTR MaLR 5 505 0 2168 129 39 3 chr10 32226696 32227029 -108089736 - MSTA LTR MaLR -83 345 1 993 214 68 93 chr10 32227054 32227376 -108089389 - MER77 LTR ERV1 -240 365 52 1778 133 0 66 chr10 32227694 32227995 -108088770 - AluJb SINE Alu -31 281 1 422 259 203 39 chr10 32228220 32228506 -108088259 + L3 LINE CR1 430 762 -815 1879 148 0 23 chr10 32228509 32228813 -108087952 + AluJo SINE Alu 1 297 -15 807 108 0 0 chr10 32228881 32229001 -108087764 + (TA)n Simple_repeat Simple_repeat 1 120 0 1035 290 148 21 chr10 32229159 32229680 -108087085 + L3 LINE CR1 872 1458 -119 453 269 12 66 chr10 32231331 32231498 -108085267 + MER5B DNA MER1_type 21 178 0 228 178 0 22 chr10 32231853 32231898 -108084867 + MIR SINE MIR 97 140 -68 2561 110 16 14 chr10 32232325 32232688 -108084077 + THE1B LTR MaLR 1 364 0 288 237 150 63 chr10 32233451 32233658 -108083107 - L2 LINE L2 -5 3308 3084 204 229 0 21 chr10 32234035 32234083 -108082682 + GA-rich Low_complexity Low_complexity 3 49 0 29 132 0 0 chr10 32234425 32234478 -108082287 + GC_rich Low_complexity Low_complexity 1 53 0 383 270 9 47 chr10 32234704 32234961 -108081804 + GA-rich Low_complexity Low_complexity 1 247 0 340 256 36 22 chr10 32235975 32236112 -108080653 + MIR3 SINE MIR 21 159 -49 1715 158 17 20 chr10 32237202 32237494 -108079271 - AluJb SINE Alu -21 291 1 312 299 19 0 chr10 32237494 32237601 -108079164 - L2 LINE L2 -12 3301 3193 211 304 88 0 chr10 32237782 32237907 -108078858 + MIR SINE MIR 120 255 -7 370 250 42 17 chr10 32238287 32238407 -108078358 + MIR SINE MIR 62 184 -78 2294 161 3 6 chr10 32238531 32238897 -108077868 - MLT1A1 LTR MaLR 0 365 1 1509 182 10 23 chr10 32239270 32239577 -108077188 + AluJo SINE Alu 1 303 -9 2278 131 103 5 chr10 32239584 32239974 -108076791 - MSTA LTR MaLR 0 428 1 777 209 78 114 chr10 32240853 32241303 -108075462 + MLT1H LTR MaLR 117 391 -18 733 222 46 42 chr10 32241362 32241591 -108075174 - MLT2D LTR ERVL 0 414 227 1089 138 112 36 chr10 32241635 32241859 -108074906 - AluJo SINE Alu -6 306 66 760 234 47 5 chr10 32241859 32242051 -108074714 - MLT2D LTR ERVL -214 200 1 267 242 121 20 chr10 32242114 32242213 -108074552 + MIR SINE MIR 19 127 -81 1705 137 161 75 chr10 32242519 32242891 -108073874 - MER4A LTR ERV1 0 664 261 580 120 22 0 chr10 32242893 32242985 -108073780 - MER4A LTR ERV1 -570 94 1 392 303 86 41 chr10 32243152 32243442 -108073323 + MLT1K LTR MaLR 124 426 -162 1408 174 8 0 chr10 32243538 32243779 -108072986 - AluJo SINE Alu -30 282 40 1494 186 6 35 chr10 32244488 32244806 -108071959 - AluJo SINE Alu -1 311 3 201 171 24 0 chr10 32245282 32245323 -108071442 + (CA)n Simple_repeat Simple_repeat 2 43 0 232 195 13 39 chr10 32245621 32245698 -108071067 + (TTA)n Simple_repeat Simple_repeat 3 77 0 971 284 77 0 chr10 32246172 32246471 -108070294 + MER69 DNA AcHobo 2 323 -903 270 298 107 51 chr10 32246681 32246859 -108069906 + MIR SINE MIR 17 204 -58 237 276 46 11 chr10 32247022 32247109 -108069656 - MIR SINE MIR -81 127 38 499 292 19 48 chr10 32247247 32247456 -108069309 - MIR SINE MIR -58 204 2 576 219 103 7 chr10 32247809 32247955 -108068810 + MER5B DNA MER1_type 3 162 -16 2029 136 0 17 chr10 32248058 32248359 -108068406 - AluSx SINE Alu -14 298 3 1195 120 6 17 chr10 32248361 32248536 -108068229 - AluJb SINE Alu -6 306 134 2205 123 0 3 chr10 32248536 32248836 -108067929 - AluSx SINE Alu -13 299 1 2222 96 24 0 chr10 32249296 32249588 -108067177 + AluSc SINE Alu 1 299 -10 990 136 116 0 chr10 32249735 32249882 -108066883 + AluSg SINE Alu 1 164 -146 838 138 0 0 chr10 32250282 32250405 -108066360 + FLAM_C SINE Alu 3 125 -8 1710 142 3 88 chr10 32251382 32251721 -108065044 - AluJo SINE Alu -2 310 1 197 306 0 16 chr10 32251791 32251853 -108064912 + MIR SINE MIR 5 65 -197 604 191 49 12 chr10 32251930 32252092 -108064673 - MER96B DNA MER1_type? -242 175 8 342 223 101 34 chr10 32252128 32252276 -108064489 + MIR SINE MIR 91 248 -14 1870 218 48 30 chr10 32253197 32253638 -108063127 + MLT1D LTR MaLR 1 449 -56 1476 128 132 0 chr10 32253638 32253880 -108062885 - AluSx SINE Alu -11 301 28 1952 131 28 3 chr10 32254026 32254309 -108062456 + AluSx SINE Alu 1 290 -22 222 118 0 0 chr10 32254442 32254476 -108062289 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2481 90 0 0 chr10 32255238 32255548 -108061217 + AluSx SINE Alu 1 310 -2 696 271 48 19 chr10 32256309 32256519 -108060246 + MLT1I LTR MaLR 194 409 0 2351 112 0 3 chr10 32256746 32257060 -108059705 + AluSq SINE Alu 1 313 0 200 323 43 32 chr10 32257279 32257372 -108059393 + L2 LINE L2 3143 3236 -36 897 281 42 3 chr10 32257545 32257851 -108058914 + L1ME3A LINE L1 5559 5875 -287 330 230 6 36 chr10 32258400 32258565 -108058200 + CT-rich Low_complexity Low_complexity 3 162 0 2261 114 0 0 chr10 32258643 32259058 -108057707 - AluSx SINE Alu 0 415 1 559 195 24 12 chr10 32259076 32259245 -108057520 + CT-rich Low_complexity Low_complexity 3 173 0 249 210 16 16 chr10 32259279 32259341 -108057424 + CT-rich Low_complexity Low_complexity 1 62 0 455 306 38 10 chr10 32260501 32260710 -108056055 + MIR SINE MIR 23 237 -25 2835 149 50 27 chr10 32260712 32261107 -108055658 + MER1A DNA MER1_type 1 412 -2288 2239 112 0 19 chr10 32261107 32261406 -108055359 + AluSx SINE Alu 1 295 -17 876 108 0 0 chr10 32261406 32261536 -108055229 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2239 112 0 19 chr10 32261536 32261549 -108055216 + AluSx SINE Alu 295 307 -5 2835 149 50 27 chr10 32261549 32261668 -108055097 + MER1A DNA MER1_type 412 527 0 29 28 0 0 chr10 32261961 32261997 -108054768 + AT_rich Low_complexity Low_complexity 1 36 0 193 148 93 0 chr10 32263366 32263420 -108053345 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1526 186 16 47 chr10 32263822 32264144 -108052621 + AluJo SINE Alu 1 312 0 404 62 49 25 chr10 32264149 32264230 -108052535 + GA-rich Low_complexity Low_complexity 2 84 0 1699 209 98 15 chr10 32264558 32264955 -108051810 + MLT2B1 LTR ERVL 1 430 -90 514 196 11 0 chr10 32264963 32265055 -108051710 - MLT2B1 LTR ERVL -55 465 373 1910 164 30 82 chr10 32265078 32265252 -108051513 - MSTB1 LTR MaLR -12 420 238 2141 130 119 8 chr10 32265252 32265637 -108051128 - MSTA LTR MaLR 0 428 1 1910 164 30 82 chr10 32265637 32265901 -108050864 - MSTB1 LTR MaLR -194 238 5 286 30 0 0 chr10 32265906 32265939 -108050826 + MLT2C1 LTR ERVL 365 397 0 651 282 74 12 chr10 32266252 32266629 -108050136 + L2 LINE L2 2734 3134 -179 591 161 3 22 chr10 32266635 32266766 -108049999 - L1PA16 LINE L1 -122 6034 5913 357 268 27 27 chr10 32266773 32266885 -108049880 + MLT1J2 LTR MaLR 67 178 -272 2004 131 14 14 chr10 32267240 32267530 -108049235 + AluSx SINE Alu 1 290 -22 723 24 0 0 chr10 32267530 32267615 -108049150 + (GGAA)n Simple_repeat Simple_repeat 2 86 0 1153 146 42 42 chr10 32267733 32267973 -108048792 - THE1C LTR MaLR -7 368 129 309 135 0 0 chr10 32268017 32268069 -108048696 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 2474 111 30 52 chr10 32268513 32268920 -108047845 - MER48 LTR ERV1 0 398 1 226 306 138 64 chr10 32268932 32269259 -108047506 + L2 LINE L2 2863 3213 -100 1634 206 25 15 chr10 32269271 32269596 -108047169 - LTR40a LTR ERVL -13 506 179 2194 168 38 33 chr10 32269607 32270157 -108046608 - MLT2A2 LTR ERVL 0 554 1 517 210 169 0 chr10 32270159 32270283 -108046482 - LTR40a LTR ERVL -350 169 25 1417 178 165 3 chr10 32270541 32270856 -108045909 - MER47A DNA MER2_type 0 366 1 353 281 80 61 chr10 32270858 32271373 -108045392 - L1MC4a LINE L1 -109 6012 5554 388 251 164 69 chr10 32271783 32272021 -108044744 + MLT1H LTR MaLR 225 521 -34 2083 107 0 0 chr10 32272021 32272302 -108044463 - AluSg SINE Alu 0 299 19 388 251 164 69 chr10 32272302 32272341 -108044424 + MLT1H LTR MaLR 521 555 0 2587 102 3 24 chr10 32272399 32272771 -108043994 - THE1B LTR MaLR 0 364 1 2208 142 31 0 chr10 32273109 32273462 -108043303 - THE1B LTR MaLR 0 364 1 207 203 0 0 chr10 32274132 32274191 -108042574 + CT-rich Low_complexity Low_complexity 2 60 0 221 366 84 14 chr10 32274192 32274405 -108042360 + L3b LINE CR1 1268 1495 -88 2204 115 0 0 chr10 32274630 32274916 -108041849 - AluSx SINE Alu -26 286 1 318 141 0 127 chr10 32275066 32275137 -108041628 + MLT1E1 LTR MaLR 1 62 -592 2362 93 0 13 chr10 32275763 32276074 -108040691 + AluSx SINE Alu 5 311 -1 2004 125 4 0 chr10 32276452 32276765 -108040000 - AluSx SINE Alu 0 314 1 274 229 66 119 chr10 32276801 32277028 -108039737 - L1MC4 LINE L1 -1 8041 7827 828 263 98 40 chr10 32277084 32277480 -108039285 - L1ME2 LINE L1 -33 6131 5713 2028 138 10 7 chr10 32277662 32277959 -108038806 - AluSx SINE Alu -14 298 1 242 296 45 11 chr10 32278364 32278452 -108038313 + MIR3 SINE MIR 91 181 -27 251 200 0 40 chr10 32278493 32278568 -108038197 + (TATG)n Simple_repeat Simple_repeat 1 72 0 370 315 54 11 chr10 32278625 32278885 -108037880 + L1M4 LINE L1 4799 5069 -1077 1708 168 29 83 chr10 32279410 32279544 -108037221 + MLT1A1 LTR MaLR 1 141 -224 1730 108 0 21 chr10 32279544 32279785 -108036980 + AluSx SINE Alu 64 299 -13 1708 168 29 83 chr10 32279785 32279981 -108036784 + MLT1A1 LTR MaLR 141 310 -55 1974 180 22 32 chr10 32279981 32280381 -108036384 + MSTD LTR MaLR 1 396 0 1708 168 29 83 chr10 32280381 32280435 -108036330 + MLT1A1 LTR MaLR 310 365 0 1687 279 124 58 chr10 32280444 32281336 -108035429 - MER45C DNA AcHobo 0 953 3 1119 215 42 0 chr10 32281764 32282029 -108034736 + MER69 DNA AcHobo 82 357 -2169 1909 223 62 23 chr10 32282381 32283031 -108033734 + MER69 DNA AcHobo 1845 2519 -7 701 167 0 9 chr10 32283315 32283446 -108033319 + AluSg/x SINE Alu 179 310 -308 2041 126 0 0 chr10 32283446 32283731 -108033034 + AluSx SINE Alu 1 285 -27 701 167 0 9 chr10 32283731 32283756 -108033009 + AluSg/x SINE Alu 310 618 0 310 344 117 23 chr10 32285243 32285551 -108031214 + L2 LINE L2 2481 2817 -497 1990 109 18 21 chr10 32285572 32285885 -108030880 - AluSx SINE Alu 0 312 1 457 270 0 0 chr10 32287249 32287349 -108029416 - MER81 DNA DNA 0 114 15 1444 168 47 34 chr10 32287512 32287809 -108028956 - AluJo SINE Alu -11 301 1 671 149 37 0 chr10 32287823 32287930 -108028835 - FLAM_C SINE Alu -19 124 14 2212 114 0 3 chr10 32289509 32289808 -108026957 - AluSx SINE Alu -14 298 1 284 88 123 0 chr10 32290444 32290501 -108026264 - L1MA4A LINE L1 0 6303 6240 1123 70 0 0 chr10 32290585 32290727 -108026038 + L1MA1 LINE L1 6161 6302 0 955 139 48 12 chr10 32291661 32291826 -108024939 + FAM SINE Alu 5 175 0 2521 143 11 28 chr10 32292033 32292363 -108024402 - MSTA LTR MaLR 0 428 105 2340 96 0 7 chr10 32292363 32292666 -108024099 + AluSx SINE Alu 1 301 -11 2521 143 11 28 chr10 32292666 32292770 -108023995 - MSTA LTR MaLR -323 105 1 1058 124 0 68 chr10 32292957 32293134 -108023631 - AluSg/x SINE Alu -19 291 127 1178 245 65 7 chr10 32293214 32293630 -108023135 - Charlie2 DNA MER1_type -5 2857 2418 1063 133 0 0 chr10 32293747 32293905 -108022860 + FRAM SINE Alu 1 151 -25 442 247 123 12 chr10 32295280 32295450 -108021315 + MLT1J LTR MaLR 273 461 -50 2402 113 30 25 chr10 32295457 32295819 -108020946 + THE1B LTR MaLR 1 364 0 464 282 8 8 chr10 32295980 32296097 -108020668 - L2 LINE L2 0 3313 3197 2029 104 7 3 chr10 32296279 32296568 -108020197 + AluSx SINE Alu 12 301 -11 319 205 102 133 chr10 32296731 32296897 -108019868 + L1ME4a LINE L1 5960 6120 -1 2188 139 108 8 chr10 32296915 32297302 -108019463 - MSTA LTR MaLR 0 428 3 1680 265 81 11 chr10 32297337 32297891 -108018874 - L1ME3A LINE L1 -19 6151 5559 209 326 42 32 chr10 32298061 32298156 -108018609 - L2 LINE L2 -34 3279 3184 2134 116 0 3 chr10 32298375 32298676 -108018089 - AluSq SINE Alu -13 300 1 727 294 38 23 chr10 32298903 32299165 -108017600 - MLT1I LTR MaLR 0 409 144 201 365 75 48 chr10 32299298 32299630 -108017135 - L2 LINE L2 -610 2704 2364 1571 154 29 29 chr10 32299926 32300237 -108016528 + AluSx SINE Alu 1 311 -1 1702 164 0 30 chr10 32300308 32300606 -108016159 + AluJb SINE Alu 7 295 -17 28 0 0 0 chr10 32300612 32300640 -108016125 + AT_rich Low_complexity Low_complexity 1 28 0 1806 223 73 62 chr10 32300758 32300884 -108015881 + MLT1E LTR MaLR 2 125 -468 1521 146 4 0 chr10 32300884 32301175 -108015590 + L1MA4 LINE L1 6031 6322 0 1806 223 73 62 chr10 32301175 32301594 -108015171 + MLT1E LTR MaLR 125 554 -39 529 265 59 55 chr10 32301633 32301793 -108014972 - Charlie2 DNA MER1_type -2523 259 96 2015 109 0 3 chr10 32301793 32302086 -108014679 + AluSg SINE Alu 2 293 -17 529 265 59 55 chr10 32302086 32302178 -108014587 - Charlie2 DNA MER1_type -2686 96 6 1553 158 4 18 chr10 32302650 32302928 -108013837 - AluJo SINE Alu -20 292 19 289 236 16 94 chr10 32303016 32303143 -108013622 - L1ME4a LINE L1 -27 6094 5978 233 205 0 0 chr10 32304333 32304372 -108012393 - L2 LINE L2 -13 3300 3262 2027 169 22 17 chr10 32304785 32305147 -108011618 + MLT1A1 LTR MaLR 1 364 -1 1709 147 3 18 chr10 32307414 32307723 -108009042 + AluSx SINE Alu 2 306 0 424 302 23 0 chr10 32308737 32308866 -108007899 - MIR SINE MIR -15 247 116 1951 136 35 43 chr10 32308875 32309305 -108007460 + THE1C LTR MaLR 1 363 -12 263 343 10 30 chr10 32309308 32309407 -108007358 - MIR SINE MIR -150 112 16 472 333 65 14 chr10 32310006 32310282 -108006483 - L2 LINE L2 -15 3298 3009 821 166 7 0 chr10 32310309 32310448 -108006317 + AluJb SINE Alu 160 299 -13 613 261 119 30 chr10 32310448 32310751 -108006014 - L2 LINE L2 -425 2889 2560 453 198 0 55 chr10 32310945 32311036 -108005729 + MER58A DNA MER1_type 9 94 -13 1955 113 32 0 chr10 32311107 32311389 -108005376 - AluSx SINE Alu -11 301 11 687 274 68 23 chr10 32312109 32312328 -108004437 + MLT1J2 LTR MaLR 37 265 -185 850 184 12 24 chr10 32312502 32312670 -108004095 - FAM SINE Alu -9 166 1 459 331 13 19 chr10 32312717 32312874 -108003891 + MIR SINE MIR 17 172 -90 309 259 24 12 chr10 32312878 32312963 -108003802 - L2 LINE L2 -3 3310 3225 415 180 36 54 chr10 32313142 32313231 -108003534 - MER96B DNA MER1_type? 0 417 329 1519 191 0 13 chr10 32313231 32313535 -108003230 + AluJo SINE Alu 1 300 -12 415 180 36 54 chr10 32313535 32313556 -108003209 - MER96B DNA MER1_type? -88 329 309 1248 144 156 64 chr10 32313564 32313891 -108002874 - THE1B LTR MaLR -7 357 1 586 138 69 31 chr10 32313891 32314015 -108002750 + MER96B DNA MER1_type? 100 228 -189 317 265 0 4 chr10 32314637 32314882 -108001883 + (TG)n Simple_repeat Simple_repeat 1 243 0 285 260 0 0 chr10 32314899 32315068 -108001697 + (TG)n Simple_repeat Simple_repeat 2 170 0 790 76 168 0 chr10 32315649 32315742 -108001023 - MER85 DNA T2_type 0 139 20 267 31 0 0 chr10 32315742 32315774 -108000991 + (CA)n Simple_repeat Simple_repeat 1 32 0 790 76 168 0 chr10 32315774 32315799 -108000966 - MER85 DNA T2_type -119 20 1 329 219 126 93 chr10 32315952 32315985 -108000780 + MIR SINE MIR 63 93 -169 1092 143 22 0 chr10 32315985 32316167 -108000598 + MER5A DNA MER1_type 1 186 -3 329 219 126 93 chr10 32316167 32316284 -108000481 + MIR SINE MIR 93 218 -44 1942 81 4 4 chr10 32316809 32317067 -107999698 + L1PA7 LINE L1 5891 6148 -6 2105 173 63 19 chr10 32317101 32317511 -107999254 - MSTA LTR MaLR 0 428 1 2495 116 27 36 chr10 32317606 32317673 -107999092 - L1MB3 LINE L1 -2 6181 6115 2121 105 0 0 chr10 32317673 32317958 -107998807 - AluSx SINE Alu -27 285 1 2495 116 27 36 chr10 32317958 32318330 -107998435 - L1MB3 LINE L1 -68 6115 5746 1916 104 22 0 chr10 32318394 32318672 -107998093 + AluSx SINE Alu 21 304 -8 2223 106 3 6 chr10 32318859 32319171 -107997594 + AluSx SINE Alu 1 311 -1 275 101 0 0 chr10 32319590 32319634 -107997131 + Alu SINE Alu 222 257 -43 448 278 23 17 chr10 32320367 32320540 -107996225 + L1MC4 LINE L1 7396 7569 -473 920 202 27 77 chr10 32320578 32320875 -107995890 - MER34 LTR ERV1 0 542 261 919 218 42 54 chr10 32320915 32321024 -107995741 - MER34 LTR ERV1 -284 258 149 2088 129 0 0 chr10 32321024 32321319 -107995446 - AluSx SINE Alu -17 295 1 919 218 42 54 chr10 32321319 32321470 -107995295 - MER34 LTR ERV1 -393 149 1 216 0 0 0 chr10 32321518 32321542 -107995223 + (A)n Simple_repeat Simple_repeat 1 24 0 381 207 82 22 chr10 32321597 32321732 -107995033 + L1MC4 LINE L1 7690 7832 -210 334 204 106 0 chr10 32321793 32321906 -107994859 + L1MC4 LINE L1 7918 8042 0 227 260 0 0 chr10 32322913 32322963 -107993802 + L2 LINE L2 3263 3312 -1 323 174 14 0 chr10 32323321 32323390 -107993375 - MER33 DNA MER1_type -22 302 233 797 173 27 129 chr10 32323430 32323725 -107993040 - MER33 DNA MER1_type -54 270 6 1941 128 0 41 chr10 32324127 32324446 -107992319 + AluSx SINE Alu 1 306 -6 1850 92 81 18 chr10 32324574 32324847 -107991918 + AluSx SINE Alu 1 290 -22 2093 111 3 0 chr10 32325474 32325772 -107990993 + AluSx SINE Alu 1 299 -13 2888 182 26 35 chr10 32325860 32326469 -107990296 + MER6A DNA MER2_type 2 605 0 2018 148 0 0 chr10 32326768 32327073 -107989692 + AluSx SINE Alu 1 305 -7 389 138 100 50 chr10 32327222 32327302 -107989463 + AluS SINE Alu 1 84 -219 182 182 91 0 chr10 32327305 32327338 -107989427 - L2 LINE L2 -269 3044 3009 1703 166 7 7 chr10 32327338 32327645 -107989120 + AluJo SINE Alu 1 307 -5 202 250 0 42 chr10 32327647 32327695 -107989070 - L2 LINE L2 -250 3022 2977 874 152 14 7 chr10 32328589 32328734 -107988031 - MER5A DNA MER1_type -43 146 1 660 217 12 4 chr10 32328747 32328991 -107987774 + GA-rich Low_complexity Low_complexity 1 246 0 3413 141 58 2 chr10 32328992 32329561 -107987204 - LTR26 LTR ERV1 0 603 3 1100 106 0 11 chr10 32329562 32329742 -107987023 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 180 77 0 0 chr10 32329742 32329768 -107986997 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 434 255 0 0 chr10 32330084 32330178 -107986587 - MER5A DNA MER1_type -87 102 9 254 295 11 32 chr10 32330625 32330720 -107986045 - MER5B DNA MER1_type 0 178 86 783 155 0 0 chr10 32330769 32330885 -107985880 + FLAM_C SINE Alu 12 127 -16 3236 172 45 35 chr10 32331093 32331755 -107985010 - L1MC2 LINE L1 -162 6182 5514 2138 105 16 0 chr10 32331790 32332094 -107984671 - AluSx SINE Alu -3 309 1 1824 137 7 3 chr10 32332190 32332513 -107984252 + AluJo SINE Alu 1 324 0 3508 51 19 19 chr10 32332760 32333227 -107983538 - L1PB1 LINE L1 -1 6150 5684 1712 167 6 26 chr10 32334727 32335038 -107981727 - AluJo SINE Alu -7 305 1 976 229 36 16 chr10 32335087 32335340 -107981425 - MIR SINE MIR -2 260 3 505 150 0 0 chr10 32335477 32335586 -107981179 - AluSg/x SINE Alu 0 312 204 329 26 0 0 chr10 32335586 32335624 -107981141 - AluSp SINE Alu -132 171 134 2225 94 0 0 chr10 32335626 32335923 -107980842 - AluSg SINE Alu -13 297 1 292 283 186 59 chr10 32335928 32336165 -107980600 - L1ME LINE L1 -346 5775 5509 1558 238 145 29 chr10 32336451 32337002 -107979763 - L1ME3A LINE L1 -15 6155 5541 531 239 26 7 chr10 32337012 32337167 -107979598 + L1M4 LINE L1 5188 5345 -801 1967 183 133 38 chr10 32337203 32337678 -107979087 - MLT2B1 LTR ERVL 0 520 1 2190 86 0 19 chr10 32337773 32338088 -107978677 - AluSc SINE Alu 0 309 1 712 237 50 7 chr10 32338088 32338359 -107978406 - L1M3 LINE L1 -740 5440 5161 1981 89 41 17 chr10 32338383 32338675 -107978090 - LTR9B LTR ERV1 -345 299 1 404 211 53 0 chr10 32338676 32338752 -107978013 + Tigger3(Golem) DNA MER2_type 2949 3028 -1 294 243 29 58 chr10 32338771 32338874 -107977891 + L2 LINE L2 3171 3270 -43 233 235 0 0 chr10 32339244 32339295 -107977470 + L3 LINE CR1 1088 1138 -439 1116 174 38 9 chr10 32339846 32340058 -107976707 - MER20 DNA MER1_type -1 218 1 883 124 0 0 chr10 32340279 32340408 -107976357 - FLAM_C SINE Alu 0 133 5 352 253 81 90 chr10 32340693 32341091 -107975674 - MLT1J LTR MaLR -16 495 36 1785 167 14 0 chr10 32341575 32341869 -107974896 + AluSx SINE Alu 1 298 -14 1633 143 8 4 chr10 32341870 32342128 -107974637 + AluSx SINE Alu 38 296 -16 242 333 20 20 chr10 32342771 32342873 -107973892 - MER5B DNA MER1_type -41 137 36 216 259 56 0 chr10 32342938 32342992 -107973773 - MIR SINE MIR -65 143 87 240 221 58 19 chr10 32343778 32343882 -107972883 + (CA)n Simple_repeat Simple_repeat 1 108 0 351 237 40 35 chr10 32344057 32344230 -107972535 + (CA)n Simple_repeat Simple_repeat 2 175 0 275 263 71 0 chr10 32344398 32344497 -107972268 - L2 LINE L2 0 3313 3208 940 237 46 62 chr10 32344681 32344835 -107971930 - MER33 DNA MER1_type -2261 324 169 2015 97 0 81 chr10 32344835 32345169 -107971596 + AluSx SINE Alu 1 309 0 940 237 46 62 chr10 32345169 32345338 -107971427 - MER33 DNA MER1_type -2416 169 5 360 0 0 0 chr10 32345570 32345610 -107971155 + (CA)n Simple_repeat Simple_repeat 1 40 0 704 176 0 8 chr10 32345614 32345739 -107971026 + AluSg/x SINE Alu 175 298 -12 183 42 0 0 chr10 32346374 32346398 -107970367 + (A)n Simple_repeat Simple_repeat 1 24 0 283 260 67 19 chr10 32346520 32346624 -107970141 + MIR SINE MIR 75 183 -79 1756 200 67 49 chr10 32346649 32347158 -107969607 - LTR40a LTR ERVL 0 519 2 217 247 73 60 chr10 32347181 32347331 -107969434 - MIR SINE MIR -33 229 78 311 232 0 53 chr10 32348007 32348102 -107968663 - MIR SINE MIR -5 257 168 1892 159 6 16 chr10 32349663 32349978 -107966787 - AluSx SINE Alu 0 312 1 1369 234 92 42 chr10 32349981 32350383 -107966382 - MLT1F LTR MaLR -40 502 81 7304 105 15 8 chr10 32350413 32350539 -107966226 - L1MA3 LINE L1 0 6305 6181 1979 128 20 23 chr10 32350539 32350843 -107965922 - AluSx SINE Alu -9 303 1 7304 105 15 8 chr10 32350843 32351926 -107964839 - L1MA3 LINE L1 -124 6181 5088 229 217 22 0 chr10 32351947 32351993 -107964772 - L1ME4a LINE L1 -88 6033 5987 237 291 75 95 chr10 32352131 32352426 -107964339 - L2 LINE L2 -12 3260 2972 291 288 170 7 chr10 32352522 32352675 -107964090 + MER5A DNA MER1_type 9 186 -3 412 204 14 84 chr10 32352837 32352979 -107963786 + MER104 DNA Tc2 1 132 -48 788 181 20 7 chr10 32353963 32354112 -107962653 - FRAM SINE Alu -16 160 10 1304 259 46 67 chr10 32354292 32354455 -107962310 + MLT1J LTR MaLR 1 166 -345 1020 228 119 13 chr10 32354455 32354766 -107961999 + MER2 DNA MER2_type 1 344 0 1304 259 46 67 chr10 32354766 32355124 -107961641 + MLT1J LTR MaLR 166 511 0 277 319 71 0 chr10 32355215 32355328 -107961437 + MIR SINE MIR 23 143 -119 1018 122 32 79 chr10 32355461 32355587 -107961178 - Tigger4(Zombi) DNA MER2_type -3 2728 2612 2232 114 0 3 chr10 32355587 32355884 -107960881 - AluSx SINE Alu -16 296 1 1018 122 32 79 chr10 32355884 32355946 -107960819 - Tigger4(Zombi) DNA MER2_type -119 2612 2549 218 222 0 0 chr10 32356204 32356249 -107960516 + (TA)n Simple_repeat Simple_repeat 2 46 0 944 223 112 66 chr10 32356319 32356755 -107960010 - MLT1C LTR MaLR 0 467 1 2471 72 0 3 chr10 32356955 32357259 -107959506 - AluY SINE Alu -8 303 1 431 142 123 38 chr10 32358430 32358493 -107958272 - Tigger4(Zombi) DNA MER2_type -246 115 59 2304 86 0 23 chr10 32358493 32358797 -107957968 + AluY SINE Alu 1 297 -14 431 142 123 38 chr10 32358797 32358839 -107957926 - Tigger4(Zombi) DNA MER2_type -302 59 1 2089 120 11 0 chr10 32358909 32359193 -107957572 + AluSp SINE Alu 1 287 -26 824 138 8 15 chr10 32359243 32359373 -107957392 + AluJ SINE Alu 1 129 -173 253 323 136 19 chr10 32360070 32360225 -107956540 - MIR3 SINE MIR -9 199 27 993 166 0 0 chr10 32361434 32361585 -107955180 + AluJ SINE Alu 134 284 -28 248 333 0 0 chr10 32364025 32364100 -107952665 + (TA)n Simple_repeat Simple_repeat 1 75 0 207 291 0 0 chr10 32364557 32364612 -107952153 + A-rich Low_complexity Low_complexity 2 56 0 324 210 0 0 chr10 32364615 32364696 -107952069 + GA-rich Low_complexity Low_complexity 3 83 0 203 88 29 0 chr10 32366547 32366581 -107950184 + (TTC)n Simple_repeat Simple_repeat 2 36 0 3719 138 18 68 chr10 32367099 32367347 -107949418 + L1MA9 LINE L1 5557 5816 -496 2493 80 0 3 chr10 32367347 32367659 -107949106 + AluSp SINE Alu 1 311 -2 3719 138 18 68 chr10 32367659 32368206 -107948559 + L1MA9 LINE L1 5816 6312 0 2215 129 7 0 chr10 32368320 32368630 -107948135 + AluSx SINE Alu 1 312 0 1635 153 38 29 chr10 32369446 32369482 -107947283 - MER33 DNA MER1_type -2268 317 283 1735 145 43 18 chr10 32369482 32369764 -107947001 - AluJo SINE Alu -23 289 1 1635 153 38 29 chr10 32369764 32370041 -107946724 - MER33 DNA MER1_type -2302 283 1 3543 128 40 27 chr10 32370971 32371308 -107945457 + MER7C DNA MER2_type 3 353 -2675 2233 129 0 0 chr10 32371308 32371610 -107945155 - AluSq SINE Alu -11 302 1 3543 128 40 27 chr10 32371610 32371864 -107944901 + MER7C DNA MER2_type 353 602 0 1611 153 4 8 chr10 32372202 32372457 -107944308 + AluJo SINE Alu 49 302 -10 2588 65 0 0 chr10 32372961 32373267 -107943498 - AluY SINE Alu -5 306 1 270 116 23 0 chr10 32373508 32373551 -107943214 + Alu SINE Alu 1 44 -259 208 311 0 0 chr10 32374026 32374100 -107942665 + C-rich Low_complexity Low_complexity 3 76 0 2574 24 7 3 chr10 32377459 32377752 -107939013 + AluY SINE Alu 1 294 -17 21 0 0 0 chr10 32377901 32377922 -107938843 + AT_rich Low_complexity Low_complexity 1 21 0 436 119 15 0 chr10 32377995 32378062 -107938703 + MER116 DNA Mariner 13 80 0 988 258 65 90 chr10 32378123 32378359 -107938406 - L1ME4a LINE L1 -103 6018 5778 1873 149 21 10 chr10 32378359 32378647 -107938118 - AluSx SINE Alu -21 291 1 988 258 65 90 chr10 32378647 32378835 -107937930 - L1ME4a LINE L1 -343 5778 5587 1824 160 7 3 chr10 32378835 32379149 -107937616 - AluSx SINE Alu 0 315 1 988 258 65 90 chr10 32379149 32379446 -107937319 - L1ME4a LINE L1 -534 5587 5315 296 190 38 76 chr10 32380060 32380139 -107936626 - MIR3 SINE MIR -23 185 110 404 82 16 0 chr10 32381119 32381180 -107935585 + (TG)n Simple_repeat Simple_repeat 1 62 0 295 268 178 38 chr10 32381370 32381583 -107935182 + MIR SINE MIR 18 260 -2 1998 159 3 0 chr10 32382085 32382394 -107934371 - AluSx SINE Alu -2 310 1 293 200 188 0 chr10 32382540 32382625 -107934140 - L2 LINE L2 -3 3310 3210 2197 105 0 7 chr10 32383560 32383856 -107932909 + AluSq SINE Alu 1 294 -19 2301 93 26 0 chr10 32385029 32385331 -107931434 - AluSg SINE Alu 0 310 1 1835 158 18 0 chr10 32385334 32385618 -107931147 - AluJo SINE Alu -23 289 1 235 204 19 37 chr10 32385650 32385704 -107931061 + L2 LINE L2 3243 3295 -18 24 0 0 0 chr10 32387726 32387750 -107929015 + AT_rich Low_complexity Low_complexity 1 24 0 1240 208 202 18 chr10 32388193 32388520 -107928245 - MSTD LTR MaLR -8 388 2 228 35 0 0 chr10 32390426 32390455 -107926310 + (CA)n Simple_repeat Simple_repeat 2 30 0 182 69 0 0 chr10 32391862 32391891 -107924874 + L2 LINE L2 3285 3313 0 287 327 43 14 chr10 32392454 32392662 -107924103 - MIR SINE MIR -21 241 28 180 297 55 11 chr10 32392919 32393010 -107923755 - MIR SINE MIR -51 211 117 247 182 36 0 chr10 32393672 32393714 -107923051 + CT-rich Low_complexity Low_complexity 2 48 -10 1854 135 22 19 chr10 32393714 32394025 -107922740 - AluJo SINE Alu 0 312 1 247 182 36 0 chr10 32394025 32394037 -107922728 + CT-rich Low_complexity Low_complexity 48 58 0 189 0 0 0 chr10 32394472 32394493 -107922272 + (T)n Simple_repeat Simple_repeat 1 21 0 2129 103 0 19 chr10 32395955 32396266 -107920499 - AluSq SINE Alu -8 305 1 1970 117 4 0 chr10 32398163 32398486 -107918279 - AluSx SINE Alu 0 324 1 291 267 186 17 chr10 32398821 32398993 -107917772 + L1ME4a LINE L1 5392 5592 -529 555 280 127 34 chr10 32399218 32399454 -107917311 + MIR SINE MIR 3 260 -2 * 569 277 20 7 chr10 32399451 32399599 -107917166 + MIR SINE MIR 91 240 -22 365 223 91 66 chr10 32399726 32399847 -107916918 + L1ME4a LINE L1 5994 6117 -4 539 301 54 6 chr10 32400049 32400215 -107916550 + MER5B DNA MER1_type 3 176 -2 229 207 69 17 chr10 32400313 32400371 -107916394 - MER5A DNA MER1_type 0 189 129 2686 13 0 0 chr10 32400373 32400676 -107916089 + AluYa5 SINE Alu 1 303 -8 2129 92 7 0 chr10 32400685 32400978 -107915787 + AluSx SINE Alu 1 295 -17 366 23 0 0 chr10 32400979 32401022 -107915743 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 1303 159 8 21 chr10 32401111 32401350 -107915415 + AluJb SINE Alu 59 294 -18 294 29 0 0 chr10 32403019 32403054 -107913711 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1626 175 17 0 chr10 32405609 32405901 -107910864 + AluJo SINE Alu 1 297 -15 184 128 26 77 chr10 32405932 32405971 -107910794 + MER5A DNA MER1_type 2 38 -151 786 178 81 35 chr10 32406055 32406229 -107910536 - MER5A DNA MER1_type -4 185 4 526 217 21 122 chr10 32406238 32406427 -107910338 + MER5B DNA MER1_type 3 172 -6 384 298 0 19 chr10 32406466 32406570 -107910195 - MER5A DNA MER1_type -28 161 60 944 154 17 23 chr10 32406570 32406745 -107910020 - FRAM SINE Alu -7 169 1 223 263 0 11 chr10 32407105 32407280 -107909485 + (CA)n Simple_repeat Simple_repeat 2 174 0 230 95 24 0 chr10 32407338 32407380 -107909385 + (CA)n Simple_repeat Simple_repeat 2 44 0 191 266 128 9 chr10 32407460 32407569 -107909196 - MIR3 SINE MIR -27 181 60 316 221 229 0 chr10 32407905 32408027 -107908738 - MIR SINE MIR -3 259 110 429 293 96 26 chr10 32408268 32408442 -107908323 + MIR SINE MIR 17 199 -61 2163 109 3 0 chr10 32408488 32408799 -107907966 + AluSx SINE Alu 1 312 0 2520 120 17 3 chr10 32409760 32410119 -107906646 - THE1B LTR MaLR 0 364 1 1702 102 22 25 chr10 32410853 32410960 -107905805 - L1MA6 LINE L1 -6 6294 6188 2482 105 21 103 chr10 32410960 32411041 -107905724 + MSTC LTR MaLR 1 87 -341 1824 151 3 0 chr10 32411041 32411332 -107905433 - AluSg SINE Alu -18 292 1 2482 105 21 103 chr10 32411332 32411715 -107905050 + MSTC LTR MaLR 87 427 -1 1702 102 22 25 chr10 32411715 32411881 -107904884 - L1MA6 LINE L1 -112 6188 6022 2348 92 0 0 chr10 32411893 32412197 -107904568 - AluSg SINE Alu -6 304 1 1309 218 66 3 chr10 32412288 32412623 -107904142 + L1MA4 LINE L1 5945 6300 0 1670 178 3 0 chr10 32412735 32413028 -107903737 - AluJo SINE Alu -18 294 1 309 303 15 77 chr10 32413062 32413257 -107903508 + MER5A DNA MER1_type 4 186 -3 1389 165 129 0 chr10 32413977 32414249 -107902516 + AluSx SINE Alu 1 307 -5 981 196 0 0 chr10 32414251 32414414 -107902351 + AluJo/FRAM SINE Alu 137 299 -13 526 130 13 0 chr10 32414551 32414628 -107902137 - AluS SINE Alu -234 79 2 189 243 0 0 chr10 32414647 32414684 -107902081 - L2 LINE L2 -27 3245 3209 1894 162 55 0 chr10 32414747 32415075 -107901690 - MER7A DNA MER2_type 0 346 3 2199 100 3 7 chr10 32415108 32415417 -107901348 + AluSq SINE Alu 1 308 -5 1261 239 51 20 chr10 32415707 32416097 -107900668 + MER74B LTR ERVL 211 612 -10 1270 217 52 11 chr10 32416317 32416603 -107900162 + AluJo SINE Alu 1 298 -4 1035 130 0 0 chr10 32416685 32416839 -107899926 + AluJb SINE Alu 142 295 -17 192 40 0 0 chr10 32417886 32417911 -107898854 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2070 118 3 0 chr10 32417913 32418202 -107898563 - AluSx SINE Alu -18 294 5 1751 106 99 0 chr10 32418524 32418797 -107897968 + AluSx SINE Alu 1 300 -12 276 81 23 69 chr10 32419108 32419195 -107897570 + (GGGAA)n Simple_repeat Simple_repeat 2 84 0 257 274 68 14 chr10 32419626 32419656 -107897109 + MER5A DNA MER1_type 110 137 -52 1871 120 46 0 chr10 32419656 32419939 -107896826 - AluSg SINE Alu -14 296 1 257 274 68 14 chr10 32419939 32419981 -107896784 + MER5A DNA MER1_type 137 186 -3 426 297 124 22 chr10 32420169 32420354 -107896411 + MIR SINE MIR 20 223 -39 824 68 0 8 chr10 32420649 32420766 -107895999 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 1610 161 10 17 chr10 32421792 32422091 -107894674 - AluJo SINE Alu -15 297 1 2212 91 0 10 chr10 32423031 32423328 -107893437 - AluSx SINE Alu -18 294 1 1081 161 11 0 chr10 32424276 32424456 -107892309 - AluSg/x SINE Alu -10 300 119 3702 174 45 4 chr10 32424457 32425152 -107891613 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32425396 32425429 -107891336 + CT-rich Low_complexity Low_complexity 2 36 0 1868 66 55 0 chr10 32426116 32426373 -107890392 + AluY SINE Alu 35 305 -6 231 259 0 17 chr10 32428273 32428331 -107888434 - MLT1K LTR MaLR 0 588 532 2073 116 7 0 chr10 32428434 32428735 -107888030 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32429358 32429386 -107887379 + AT_rich Low_complexity Low_complexity 1 28 0 2007 125 3 16 chr10 32429440 32429573 -107887192 + AluSc SINE Alu 1 134 -175 2251 105 3 6 chr10 32429573 32429887 -107886878 + AluSp SINE Alu 1 313 0 2007 125 3 16 chr10 32429887 32430064 -107886701 + AluSc SINE Alu 134 307 -2 305 233 8 125 chr10 32430200 32430320 -107886445 - MIR SINE MIR -61 147 42 1377 198 50 3 chr10 32430749 32431047 -107885718 + AluJo SINE Alu 1 312 0 621 215 6 17 chr10 32431065 32431242 -107885523 + GA-rich Low_complexity Low_complexity 2 176 0 1347 222 104 64 chr10 32431337 32431785 -107884980 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32431785 32431879 -107884886 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1347 222 104 64 chr10 32431879 32431929 -107884836 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32433082 32433153 -107883612 + AT_rich Low_complexity Low_complexity 1 71 0 2009 116 14 0 chr10 32434164 32434458 -107882307 + AluSx SINE Alu 1 298 -14 232 365 153 0 chr10 32435607 32435744 -107881021 + L2 LINE L2 3099 3256 -16 355 230 53 0 chr10 32436296 32436397 -107880368 + MIR SINE MIR 103 211 -51 385 200 207 29 chr10 32437136 32437276 -107879489 - MER3 DNA MER1_type 0 209 45 1841 126 9 49 chr10 32437460 32437785 -107878980 + AluSx SINE Alu 1 312 0 262 297 162 57 chr10 32438178 32438616 -107878149 + L2 LINE L2 2830 3313 0 473 261 67 39 chr10 32439470 32439650 -107877115 - L2 LINE L2 -9 3304 3120 1983 201 88 36 chr10 32439705 32440226 -107876539 + LTR10A LTR ERV1 1 548 -61 271 45 91 0 chr10 32440282 32440326 -107876439 - MER4B LTR ERV1 0 779 732 2010 104 3 7 chr10 32440369 32440666 -107876099 - AluSx SINE Alu -6 306 11 2955 119 34 12 chr10 32440726 32441120 -107875645 - MER4B LTR ERV1 -31 748 172 2014 111 3 7 chr10 32441120 32441408 -107875357 + AluSg SINE Alu 1 287 -23 2955 119 34 12 chr10 32441408 32441510 -107875255 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32441510 32441535 -107875230 + AT_rich Low_complexity Low_complexity 1 25 0 913 104 0 0 chr10 32441535 32441660 -107875105 - AluSq/x SINE Alu -188 125 1 600 107 0 0 chr10 32441660 32441744 -107875021 - MER4B LTR ERV1 -526 84 1 2911 150 25 47 chr10 32442110 32442165 -107874600 - L1MB1 LINE L1 -17 6172 6117 1993 128 3 10 chr10 32442165 32442463 -107874302 - AluSx SINE Alu -16 296 1 2911 150 25 47 chr10 32442463 32442707 -107874058 - L1MB1 LINE L1 -72 6117 5888 2814 97 0 0 chr10 32442707 32443069 -107873696 - THE1B LTR MaLR 0 364 3 2911 150 25 47 chr10 32443069 32443327 -107873438 - L1MB1 LINE L1 -301 5888 5626 387 117 17 0 chr10 32443330 32443390 -107873375 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32443606 32443639 -107873126 + (CA)n Simple_repeat Simple_repeat 2 34 0 1266 93 11 6 chr10 32443720 32443902 -107872863 - AluSp SINE Alu -7 306 124 2843 103 23 16 chr10 32444304 32444731 -107872034 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32444775 32444802 -107871963 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 468 250 167 0 chr10 32444913 32445057 -107871708 - MIR SINE MIR 0 262 95 1698 111 115 7 chr10 32445335 32445605 -107871160 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32446133 32446431 -107870334 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32446524 32446793 -107869972 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32447113 32447745 -107869020 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32448023 32448319 -107868446 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32451290 32451367 -107865398 - FLAM SINE Alu -18 125 51 292 247 70 119 chr10 32451431 32451658 -107865107 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32451675 32452184 -107864581 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32452184 32452509 -107864256 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32452509 32452582 -107864183 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32452582 32452883 -107863882 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32452883 32453118 -107863647 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32453154 32453214 -107863551 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32453261 32453570 -107863195 + AluSx SINE Alu 1 311 -1 2343 91 0 10 chr10 32454539 32454836 -107861929 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32455784 32455964 -107860801 - AluSg/x SINE Alu -10 300 119 3713 177 43 4 chr10 32455965 32456661 -107860104 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32456905 32456938 -107859827 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32457624 32457881 -107858884 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32459780 32459838 -107856927 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32459941 32460242 -107856523 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32460865 32460893 -107855872 + AT_rich Low_complexity Low_complexity 1 28 0 2116 125 3 22 chr10 32460947 32461080 -107855685 + AluSc SINE Alu 1 135 -174 2399 109 3 0 chr10 32461080 32461392 -107855373 + AluSp SINE Alu 1 313 0 2116 125 3 22 chr10 32461392 32461571 -107855194 + AluSc SINE Alu 135 307 -2 269 233 8 125 chr10 32461707 32461827 -107854938 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32462256 32462539 -107854226 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32462539 32462749 -107854016 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32462844 32463292 -107853473 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32463292 32463386 -107853379 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32463386 32463436 -107853329 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32464589 32464660 -107852105 + AT_rich Low_complexity Low_complexity 1 71 0 2207 117 13 0 chr10 32465671 32465979 -107850786 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 32466353 32466373 -107850392 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2152 109 0 0 chr10 32466374 32466649 -107850116 - AluSc SINE Alu -34 275 1 2056 111 0 33 chr10 32467196 32467502 -107849263 + AluSx SINE Alu 1 296 -16 342 0 0 0 chr10 32468024 32468062 -107848703 + (TG)n Simple_repeat Simple_repeat 2 39 0 2118 131 3 0 chr10 32468770 32469067 -107847698 + AluSx SINE Alu 1 298 -14 273 57 0 0 chr10 32469067 32469102 -107847663 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 521 184 31 0 chr10 32469935 32470033 -107846732 - FLAM_A SINE Alu 0 142 42 234 0 0 0 chr10 32470225 32470251 -107846514 + (T)n Simple_repeat Simple_repeat 1 26 0 2323 96 0 34 chr10 32470252 32470575 -107846190 + AluSx SINE Alu 1 312 0 356 81 0 16 chr10 32470575 32470637 -107846128 + (TA)n Simple_repeat Simple_repeat 1 61 0 1959 136 3 40 chr10 32472670 32472993 -107843772 + AluSx SINE Alu 1 311 -1 189 365 153 0 chr10 32474125 32474262 -107842503 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32474814 32474915 -107841850 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32475654 32475794 -107840971 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32475978 32476303 -107840462 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32477988 32478168 -107838597 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32478223 32478744 -107838021 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32478800 32478844 -107837921 - MER4B LTR ERV1 0 779 732 2104 87 7 14 chr10 32478853 32479195 -107837570 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32479244 32479638 -107837127 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32479638 32479926 -107836839 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32479926 32480028 -107836737 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32480028 32480053 -107836712 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32480053 32480178 -107836587 - AluSq/x SINE Alu -187 125 1 597 107 0 0 chr10 32480178 32480262 -107836503 - MER4B LTR ERV1 -526 84 1 2924 150 25 47 chr10 32480628 32480683 -107836082 - L1MB1 LINE L1 -17 6172 6117 2117 128 3 10 chr10 32480683 32480981 -107835784 - AluSx SINE Alu -16 296 1 2924 150 25 47 chr10 32480981 32481225 -107835540 - L1MB1 LINE L1 -72 6117 5888 2810 97 0 0 chr10 32481225 32481587 -107835178 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32481587 32481845 -107834920 - L1MB1 LINE L1 -301 5888 5626 392 117 17 0 chr10 32481848 32481908 -107834857 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32482124 32482157 -107834608 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32482238 32482420 -107834345 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32482822 32483249 -107833516 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32483293 32483320 -107833445 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32483454 32483575 -107833190 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32483853 32484123 -107832642 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32484651 32484949 -107831816 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32485042 32485311 -107831454 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32485631 32486263 -107830502 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32486541 32486837 -107829928 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32489808 32489885 -107826880 - FLAM_A SINE Alu -18 124 50 292 247 70 119 chr10 32489949 32490176 -107826589 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32490193 32490702 -107826063 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32490702 32491027 -107825738 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32491027 32491100 -107825665 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32491100 32491401 -107825364 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32491401 32491636 -107825129 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32491672 32491732 -107825033 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32491779 32492088 -107824677 + AluSx SINE Alu 1 311 -1 474 205 18 27 chr10 32492794 32492906 -107823859 - FLAM_C SINE Alu -18 125 15 193 342 25 0 chr10 32492912 32492991 -107823774 + MIR SINE MIR 67 147 -61 198 0 0 0 chr10 32493487 32493509 -107823256 + (A)n Simple_repeat Simple_repeat 1 22 0 423 66 40 0 chr10 32493735 32493811 -107822954 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 198 0 0 0 chr10 32494915 32494937 -107821828 + (TG)n Simple_repeat Simple_repeat 1 22 0 2249 102 7 7 chr10 32495646 32495950 -107820815 + AluSq SINE Alu 1 304 -9 894 264 10 5 chr10 32495950 32496158 -107820607 + MER58A DNA MER1_type 4 212 -12 246 400 40 0 chr10 32496616 32496716 -107820049 + L2 LINE L2 3121 3224 -48 362 311 80 50 chr10 32497378 32497616 -107819149 + LTR67 LTR ERVL 23 267 -290 322 301 77 14 chr10 32497709 32497852 -107818913 + LTR67 LTR ERVL 392 543 -14 880 246 157 53 chr10 32498109 32498438 -107818327 + LTR33A LTR ERVL 88 467 -56 2023 116 0 0 chr10 32498438 32498749 -107818016 - AluSx SINE Alu 0 311 1 880 246 157 53 chr10 32498749 32498813 -107817952 + LTR33A LTR ERVL 467 523 0 225 0 0 0 chr10 32499075 32499100 -107817665 + (A)n Simple_repeat Simple_repeat 1 25 0 1997 136 0 0 chr10 32499100 32499394 -107817371 + AluSx SINE Alu 1 294 -18 346 356 111 33 chr10 32499571 32499930 -107816835 + L1ME4a LINE L1 5673 6059 -62 1055 123 12 6 chr10 32499933 32500103 -107816662 - AluSc SINE Alu -16 293 123 207 170 0 64 chr10 32500127 32500143 -107816622 + CT-rich Low_complexity Low_complexity 5 20 -28 2217 122 36 31 chr10 32500143 32500503 -107816262 + THE1B LTR MaLR 1 362 -2 207 170 0 64 chr10 32500503 32500533 -107816232 + CT-rich Low_complexity Low_complexity 20 48 0 2184 120 108 57 chr10 32500760 32501167 -107815598 - MSTA LTR MaLR 0 428 1 371 268 12 0 chr10 32501256 32501338 -107815427 - MIR SINE MIR -72 136 54 2223 44 0 7 chr10 32501701 32501976 -107814789 + AluY SINE Alu 34 306 -5 225 283 38 47 chr10 32501982 32502088 -107814677 + MIR SINE MIR 133 237 -25 2426 70 0 6 chr10 32502273 32502586 -107814179 - AluY SINE Alu 0 311 1 2111 100 0 39 chr10 32502646 32502955 -107813810 - AluSx SINE Alu -15 297 1 201 83 56 0 chr10 32503357 32503393 -107813372 + (TG)n Simple_repeat Simple_repeat 1 38 0 614 113 10 10 chr10 32503446 32503543 -107813222 + MER4A LTR ERV1 1 97 -567 * 1811 138 156 77 chr10 32503540 32503918 -107812847 + MER4A LTR ERV1 257 664 0 284 320 40 32 chr10 32504140 32504265 -107812500 + L2 LINE L2 3137 3262 -10 329 262 10 48 chr10 32505068 32505171 -107811594 - MER5A DNA MER1_type -2 187 89 24 0 0 0 chr10 32505171 32505195 -107811570 + AT_rich Low_complexity Low_complexity 1 24 0 2058 100 4 0 chr10 32505208 32505487 -107811278 + AluSq SINE Alu 1 280 -33 1388 206 0 34 chr10 32505534 32505826 -107810939 - AluJo SINE Alu -30 282 1 2336 70 0 0 chr10 32506825 32507125 -107809640 + AluSg SINE Alu 1 300 -10 408 311 120 52 chr10 32507491 32507873 -107808892 + L3b LINE CR1 1167 1574 -9 736 285 52 27 chr10 32507896 32508116 -107808649 - MIR SINE MIR 0 262 38 2167 169 49 24 chr10 32508221 32508346 -107808419 - L1MA9 LINE L1 0 6312 6192 1996 142 0 0 chr10 32508346 32508655 -107808110 - AluSx SINE Alu -3 309 1 2167 169 49 24 chr10 32508655 32508995 -107807770 - L1MA9 LINE L1 -120 6192 5835 2414 55 0 3 chr10 32509555 32509867 -107806898 + AluY SINE Alu 1 311 0 2201 109 0 13 chr10 32510226 32510539 -107806226 - AluSc SINE Alu 0 309 1 1280 205 60 7 chr10 32511178 32511461 -107805304 + AluJo SINE Alu 3 300 -2 1787 159 16 13 chr10 32511956 32512368 -107804397 + AluSq SINE Alu 3 415 0 243 88 0 0 chr10 32513885 32513919 -107802846 + (CA)n Simple_repeat Simple_repeat 1 34 0 210 206 27 27 chr10 32513935 32514008 -107802757 + (CA)n Simple_repeat Simple_repeat 1 73 0 23 33 0 0 chr10 32514009 32514039 -107802726 + AT_rich Low_complexity Low_complexity 1 30 0 2169 87 3 0 chr10 32514041 32514329 -107802436 - AluSx SINE Alu -22 290 2 438 325 57 45 chr10 32514361 32514607 -107802158 - MIR SINE MIR -13 249 1 1856 150 0 3 chr10 32515033 32515333 -107801432 + AluJo SINE Alu 5 303 -9 2122 101 0 22 chr10 32515688 32516005 -107800760 - AluSx SINE Alu -2 310 1 1714 146 19 41 chr10 32516006 32516321 -107800444 - AluJo SINE Alu -2 310 3 305 309 0 12 chr10 32516855 32516939 -107799826 - L2 LINE L2 0 3272 3190 2093 123 0 3 chr10 32517195 32517504 -107799261 - AluSx SINE Alu -4 308 1 826 147 8 0 chr10 32518406 32518535 -107798230 - FLAM_C SINE Alu -3 130 1 1812 176 3 0 chr10 32518629 32518931 -107797834 + AluSx SINE Alu 1 303 -9 1032 250 89 0 chr10 32518971 32519219 -107797546 + Charlie1a DNA MER1_type 6 275 -1180 966 154 12 0 chr10 32519231 32519393 -107797372 + FRAM SINE Alu 4 167 -9 226 132 19 19 chr10 32519398 32519451 -107797314 + Charlie1a DNA MER1_type 279 331 -1124 * 2158 152 140 64 chr10 32519448 32519576 -107797189 + Charlie1a DNA MER1_type 847 964 -1797 1605 123 0 76 chr10 32519576 32519909 -107796856 - AluSx SINE Alu 0 315 6 2158 152 140 64 chr10 32519909 32520345 -107796420 + Charlie1a DNA MER1_type 964 1455 0 858 189 16 53 chr10 32520974 32521105 -107795660 + MER5A DNA MER1_type 6 129 -60 2162 109 0 7 chr10 32521105 32521408 -107795357 - AluSx SINE Alu -11 301 1 858 189 16 53 chr10 32521408 32521466 -107795299 + MER5A DNA MER1_type 129 188 -1 1697 176 3 10 chr10 32522478 32522774 -107793991 + AluJo SINE Alu 1 294 -18 655 242 0 0 chr10 32523011 32523143 -107793622 + FLAM_A SINE Alu 1 132 -1 1164 206 64 103 chr10 32523509 32523699 -107793066 + MLT1B LTR MaLR 14 183 -207 315 0 0 0 chr10 32523699 32523734 -107793031 + (CA)n Simple_repeat Simple_repeat 1 35 0 1164 206 64 103 chr10 32523734 32523931 -107792834 + MLT1B LTR MaLR 183 386 -4 380 236 114 29 chr10 32523958 32524098 -107792667 - LTR67 LTR ERVL 0 557 406 597 241 97 5 chr10 32525003 32525198 -107791567 - HsTC2 DNA Tc2 -12 1886 1674 14753 175 52 21 chr10 32525250 32528229 -107788536 - L1PB1 LINE L1 0 6867 3981 210 37 0 0 chr10 32528229 32528256 -107788509 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 14753 175 52 21 chr10 32528256 32531322 -107785443 - L1PB1 LINE L1 -2886 3981 634 1245 127 5 0 chr10 32531322 32531519 -107785246 - L1PB1 LINE L1 -6663 200 3 1048 251 39 58 chr10 32531521 32531617 -107785148 - HsTC2 DNA Tc2 -277 1621 1525 2261 79 13 0 chr10 32531617 32531922 -107784843 - AluY SINE Alu -2 309 1 1048 251 39 58 chr10 32531922 32532184 -107784581 - HsTC2 DNA Tc2 -373 1525 1270 319 293 41 24 chr10 32532202 32532325 -107784440 - HsTC2 DNA Tc2 -1764 134 10 4380 109 11 11 chr10 32532452 32533064 -107783701 - LTR9 LTR ERV1 0 612 1 2588 138 18 35 chr10 32533508 32533943 -107782822 - MSTA LTR MaLR 0 428 1 836 226 48 66 chr10 32535219 32535438 -107781327 + MLT1E3 LTR MaLR 131 405 -219 2110 124 0 6 chr10 32535438 32535752 -107781013 + AluSx SINE Alu 1 312 0 836 226 48 66 chr10 32535752 32535829 -107780936 + MLT1E3 LTR MaLR 405 482 -142 1622 189 3 6 chr10 32535879 32536192 -107780573 - AluJo SINE Alu 0 312 1 458 264 28 38 chr10 32536373 32536818 -107779947 - L1M LINE L1 -743 5403 4982 1077 303 126 73 chr10 32536823 32536938 -107779827 + L2 LINE L2 1824 1931 -1383 612 194 0 62 chr10 32536938 32537067 -107779698 + FLAM_C SINE Alu 2 122 -11 1077 303 126 73 chr10 32537067 32537205 -107779560 + L2 LINE L2 1931 2060 -1254 2011 131 46 25 chr10 32537205 32537572 -107779193 + THE1C LTR MaLR 1 375 0 1077 303 126 73 chr10 32537572 32538307 -107778458 + L2 LINE L2 2060 2866 -448 612 190 2 9 chr10 32538359 32538479 -107778286 - MLT1C LTR MaLR 0 467 245 3890 107 14 12 chr10 32538509 32539090 -107777675 + L1PA13 LINE L1 5582 6163 0 198 0 0 0 chr10 32539999 32540021 -107776744 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1026 174 92 128 chr10 32540026 32540330 -107776435 - MER51A LTR ERV1 -82 552 3 180 0 0 0 chr10 32540723 32540743 -107776022 + (T)n Simple_repeat Simple_repeat 1 20 0 2203 103 0 0 chr10 32541054 32541346 -107775419 - AluSx SINE Alu -20 292 1 4653 102 110 107 chr10 32541575 32542968 -107773797 + pTR5 LTR ERV1 79 2438 0 1206 185 100 4 chr10 32543311 32543592 -107773173 - AluJo SINE Alu -4 308 1 1963 110 11 0 chr10 32543746 32544049 -107772716 - AluSq SINE Alu 0 306 1 186 363 29 20 chr10 32544261 32544363 -107772402 - MIR SINE MIR -10 252 150 1474 203 0 17 chr10 32544914 32545210 -107771555 - AluJo SINE Alu -1 311 21 1664 139 36 30 chr10 32545218 32545519 -107771246 - AluJb SINE Alu -9 303 1 5627 203 55 77 chr10 32545521 32546025 -107770740 - L1MC3 LINE L1 -216 7569 7056 288 0 0 0 chr10 32546025 32546057 -107770708 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2058 108 0 0 chr10 32546062 32546339 -107770426 - AluSg SINE Alu -33 277 1 5627 203 55 77 chr10 32546339 32546904 -107769861 - L1MC3 LINE L1 -733 7052 6476 756 187 0 15 chr10 32546904 32547038 -107769727 - FLAM_C SINE Alu -1 132 1 5627 203 55 77 chr10 32547038 32547227 -107769538 - L1MC3 LINE L1 -1309 6476 6284 2261 65 41 0 chr10 32547227 32547519 -107769246 + AluY SINE Alu 1 304 -7 5627 203 55 77 chr10 32547519 32547859 -107768906 - L1MC3 LINE L1 -1501 6284 5998 28 61 0 0 chr10 32547960 32548009 -107768756 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32548651 32548702 -107768063 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32548723 32549035 -107767730 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32549181 32549313 -107767452 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32549399 32549432 -107767333 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32549533 32549827 -107766938 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32550002 32550222 -107766543 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32550424 32550447 -107766318 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32550447 32550565 -107766200 - FLAM_C SINE Alu -25 118 1 529 263 109 53 chr10 32551173 32551493 -107765272 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32551502 32551530 -107765235 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 235 239 73 55 chr10 32551604 32551713 -107765052 - MIR3 SINE MIR -8 200 90 314 304 26 0 chr10 32552085 32552200 -107764565 - MIR SINE MIR -111 151 34 378 74 0 0 chr10 32552412 32552466 -107764299 + (TG)n Simple_repeat Simple_repeat 2 55 0 1386 175 91 82 chr10 32552490 32552531 -107764234 - L1MC5 LINE L1 -48 7913 7874 1593 180 4 11 chr10 32552531 32552834 -107763931 + AluJb SINE Alu 7 307 0 1386 175 91 82 chr10 32552834 32553288 -107763477 - L1MC5 LINE L1 -87 7874 7413 277 224 0 0 chr10 32553286 32553344 -107763421 - L1MC4a LINE L1 -1884 5924 5867 * 1732 121 8 88 chr10 32553429 32553691 -107763074 - L1MA4 LINE L1 -3 6297 6070 1495 195 17 28 chr10 32553691 32553978 -107762787 - AluJo SINE Alu -15 297 14 1732 121 8 88 chr10 32553978 32554078 -107762687 - L1MA4 LINE L1 -230 6070 5964 623 254 90 92 chr10 32554139 32554475 -107762290 - L1MC4a LINE L1 -2058 5750 5414 840 130 0 8 chr10 32554475 32554598 -107762167 - FLAM_C SINE Alu -11 122 1 623 254 90 92 chr10 32554598 32554717 -107762048 - L1MC4a LINE L1 -2394 5414 5296 2211 105 0 30 chr10 32554875 32555179 -107761586 + AluSx SINE Alu 1 295 -17 352 342 80 13 chr10 32555274 32555499 -107761266 - MLT1I LTR MaLR -7 402 163 293 256 28 3 chr10 32555496 32555596 -107761169 - MLT1I LTR MaLR -270 139 38 * 751 160 0 8 chr10 32556491 32556616 -107760149 + AluJo SINE Alu 11 134 -178 2344 103 0 0 chr10 32556922 32557222 -107759543 + AluSx SINE Alu 1 300 -12 513 326 6 6 chr10 32557561 32557736 -107759029 + MLT1I LTR MaLR 232 406 -3 1117 234 191 37 chr10 32558137 32558457 -107758308 + HAL1 LINE L1 454 870 -1637 2127 103 3 23 chr10 32558457 32558758 -107758007 - AluSx SINE Alu -17 295 1 1117 234 191 37 chr10 32558758 32558902 -107757863 + HAL1 LINE L1 870 990 -1517 32 75 0 0 chr10 32558912 32558979 -107757786 + AT_rich Low_complexity Low_complexity 1 67 0 228 200 0 0 chr10 32559740 32559795 -107756970 + (CA)n Simple_repeat Simple_repeat 2 56 0 380 223 195 8 chr10 32559986 32560149 -107756616 + L1ME LINE L1 5470 5659 -511 2491 58 0 39 chr10 32560157 32560466 -107756299 + AluY SINE Alu 1 297 -14 846 177 19 13 chr10 32560469 32560627 -107756138 + AluJo/FRAM SINE Alu 138 296 -16 198 0 0 0 chr10 32560695 32560717 -107756048 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr10 32562425 32562463 -107754302 + (TG)n Simple_repeat Simple_repeat 2 39 0 726 184 0 22 chr10 32563098 32563234 -107753531 + FLAM_A SINE Alu 1 133 0 239 93 23 0 chr10 32563235 32563278 -107753487 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 1708 133 0 16 chr10 32563962 32564218 -107752547 + AluSx SINE Alu 1 252 -60 183 42 0 0 chr10 32564234 32564258 -107752507 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1107 161 0 11 chr10 32564631 32564811 -107751954 - FRAM SINE Alu -5 171 1 738 230 48 0 chr10 32565097 32565317 -107751448 - MIR SINE MIR -3 259 31 448 308 11 38 chr10 32566022 32566207 -107750558 + MIR SINE MIR 11 190 -72 308 308 5 43 chr10 32567481 32567692 -107749073 - MER63 DNA MER1_type -7 1681 1 423 144 62 12 chr10 32568741 32568901 -107747864 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 2994 97 0 19 chr10 32568904 32569287 -107747478 - MER57B LTR ERV1 -27 407 31 5070 148 44 35 chr10 32569287 32570232 -107746533 + LTR13 LTR ERVK 1 954 0 2994 97 0 19 chr10 32570232 32570262 -107746503 - MER57B LTR ERV1 -403 31 2 635 46 11 0 chr10 32570262 32570349 -107746416 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 859 271 173 46 chr10 32570411 32570593 -107746172 + MLT1L LTR MaLR 5 162 -453 1976 115 56 7 chr10 32570593 32570881 -107745884 - AluSx SINE Alu -10 302 1 859 271 173 46 chr10 32570881 32571200 -107745565 + MLT1L LTR MaLR 162 570 -45 964 194 106 13 chr10 32571211 32571438 -107745327 - L1MB8 LINE L1 -5 6173 5926 1992 149 10 0 chr10 32571438 32571734 -107745031 - AluSx SINE Alu -13 299 1 779 163 0 0 chr10 32571736 32571871 -107744894 - L1MB8 LINE L1 -352 5822 5688 14773 127 20 15 chr10 32571871 32574062 -107742703 + Tigger1 DNA MER2_type 1 2179 -239 1904 145 10 0 chr10 32574062 32574351 -107742414 - AluSx SINE Alu -18 294 3 14773 127 20 15 chr10 32574351 32574368 -107742397 + Tigger1 DNA MER2_type 2179 2194 -224 1637 88 0 4 chr10 32574368 32574594 -107742171 - L1PB1 LINE L1 0 6151 5927 14773 127 20 15 chr10 32574594 32574687 -107742078 + Tigger1 DNA MER2_type 2194 2315 -103 572 247 54 11 chr10 32574688 32574874 -107741891 - L1MB8 LINE L1 -692 5492 5299 * 6094 114 8 3 chr10 32574850 32575747 -107741018 - L1PA15 LINE L1 -1 6164 5264 1148 158 5 0 chr10 32575736 32575938 -107740827 + L1PA15 LINE L1 5080 5282 -864 * 642 131 56 9 chr10 32575938 32576045 -107740720 + Tigger1 DNA MER2_type 2307 2418 0 305 240 0 1 chr10 32576045 32576126 -107740639 - L1M4 LINE L1 -485 5689 5610 341 293 149 24 chr10 32576334 32576583 -107740182 - LTR50 LTR ERVL -112 683 404 278 278 49 52 chr10 32576928 32577089 -107739676 - LTR50 LTR ERVL -308 215 59 382 287 41 33 chr10 32577107 32577308 -107739457 + MIR SINE MIR 12 212 -50 1520 183 38 14 chr10 32577931 32578220 -107738545 + AluJo SINE Alu 1 296 -16 260 333 58 17 chr10 32579134 32579254 -107737511 + HAL1 LINE L1 8 132 -2375 626 311 56 16 chr10 32579521 32579843 -107736922 - L1MC4a LINE L1 -1881 5927 5593 587 251 51 53 chr10 32579837 32580370 -107736395 - L1MC4 LINE L1 -109 7933 7292 * 343 299 96 45 chr10 32580401 32580681 -107736084 - L1MC4a LINE L1 -515 5606 5336 420 280 85 0 chr10 32580734 32580852 -107735913 - MLT1J2 LTR MaLR -72 378 251 27 0 0 0 chr10 32581202 32581229 -107735536 + AT_rich Low_complexity Low_complexity 1 27 0 195 222 0 0 chr10 32581313 32581358 -107735407 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 410 354 58 23 chr10 32581378 32581723 -107735042 - L1MC4a LINE L1 -1007 5139 4783 2461 74 0 0 chr10 32581953 32582249 -107734516 - AluY SINE Alu -15 296 1 800 273 27 33 chr10 32582673 32583003 -107733762 + L1MEc LINE L1 1552 1879 -4517 1668 156 0 76 chr10 32583006 32583144 -107733621 + AluJo SINE Alu 9 111 -201 1970 147 0 22 chr10 32583144 32583457 -107733308 + AluSx SINE Alu 1 306 -6 1668 156 0 76 chr10 32583457 32583632 -107733133 + AluJo SINE Alu 111 298 -14 781 156 0 43 chr10 32583641 32583762 -107733003 + AluJo SINE Alu 2 118 -194 270 0 0 0 chr10 32583762 32583792 -107732973 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 781 156 0 43 chr10 32583792 32583811 -107732954 + AluJo SINE Alu 118 136 -176 314 368 39 15 chr10 32583812 32584016 -107732749 + L1MEc LINE L1 1883 2091 -4305 326 306 90 37 chr10 32584069 32584385 -107732380 + MLT1I LTR MaLR 80 386 -23 349 273 0 23 chr10 32584493 32584581 -107732184 + L2 LINE L2 3146 3231 -41 3004 177 26 3 chr10 32584581 32585146 -107731619 + L1PA16 LINE L1 5588 6165 -1 417 39 0 0 chr10 32585806 32585857 -107730908 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 325 158 0 0 chr10 32587180 32587237 -107729528 - MIR SINE MIR -21 241 185 204 143 0 0 chr10 32587252 32587294 -107729471 + MIR SINE MIR 170 211 -51 326 281 22 82 chr10 32587511 32587646 -107729119 - MER5B DNA MER1_type 0 178 52 192 111 0 0 chr10 32587649 32587685 -107729080 + (TC)n Simple_repeat Simple_repeat 1 36 0 228 67 0 0 chr10 32587698 32587728 -107729037 + (TG)n Simple_repeat Simple_repeat 2 31 0 2212 126 3 3 chr10 32588597 32588906 -107727859 + AluSx SINE Alu 1 309 -3 1109 301 83 23 chr10 32589186 32589410 -107727355 + LTR67 LTR ERVL 40 249 -308 3167 189 12 67 chr10 32589410 32590141 -107726624 - LTR8 LTR ERV1 0 691 1 1109 301 83 23 chr10 32590141 32590397 -107726368 + LTR67 LTR ERVL 249 549 -8 263 288 119 69 chr10 32590561 32590721 -107726044 + MLT1K LTR MaLR 53 220 -368 434 304 119 22 chr10 32590771 32590998 -107725767 + MLT1K LTR MaLR 332 580 -8 2055 141 0 0 chr10 32591132 32591431 -107725334 + AluSx SINE Alu 4 302 -10 201 336 62 9 chr10 32591444 32591557 -107725208 - L2 LINE L2 -8 3305 3187 2642 171 2 2 chr10 32591676 32592104 -107724661 - MSTA LTR MaLR 0 428 1 1850 147 7 0 chr10 32593319 32593592 -107723173 + AluSx SINE Alu 5 279 -33 234 0 0 0 chr10 32593592 32593618 -107723147 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 244 56 111 chr10 32593640 32593874 -107722891 + MLT1F1 LTR MaLR 1 221 -372 921 217 102 86 chr10 32593945 32594327 -107722438 + MLT1F1 LTR MaLR 180 567 0 446 215 132 57 chr10 32595411 32595639 -107721126 + L1MC4a LINE L1 6058 6302 -1506 789 188 0 0 chr10 32595706 32595839 -107720926 - FLAM_C SINE Alu 0 133 1 1144 235 132 41 chr10 32595950 32596388 -107720377 + MLT2B1 LTR ERVL 3 480 -40 314 162 38 0 chr10 32596399 32596472 -107720293 + (TA)n Simple_repeat Simple_repeat 1 81 -28 1819 159 0 0 chr10 32596472 32596748 -107720017 - AluSx SINE Alu -18 294 19 314 162 38 0 chr10 32596748 32596779 -107719986 + (TA)n Simple_repeat Simple_repeat 81 109 0 293 116 0 0 chr10 32596787 32596837 -107719928 + MLT2C2 LTR ERVL 417 457 -7 858 229 102 32 chr10 32596842 32597025 -107719740 + L1MC4a LINE L1 6411 6580 -1341 2298 103 0 0 chr10 32597025 32597326 -107719439 + AluSg SINE Alu 1 301 -9 858 229 102 32 chr10 32597326 32597540 -107719225 + L1MC4a LINE L1 6580 6928 -993 297 0 0 0 chr10 32597540 32597573 -107719192 + (GA)n Simple_repeat Simple_repeat 1 33 0 907 294 36 29 chr10 32597573 32597984 -107718781 + L1MC4 LINE L1 7082 7495 -547 495 288 115 56 chr10 32597968 32598279 -107718486 + L1MC4 LINE L1 7311 7602 -440 * 2183 128 0 3 chr10 32598279 32598584 -107718181 - AluSx SINE Alu -8 304 1 495 288 115 56 chr10 32598584 32598762 -107718003 + L1MC4 LINE L1 7602 7935 -107 330 98 0 0 chr10 32598782 32598833 -107717932 + (GA)n Simple_repeat Simple_repeat 1 51 0 243 209 173 36 chr10 32598856 32598966 -107717799 + L1MC4 LINE L1 7918 8042 0 826 120 0 0 chr10 32600394 32600519 -107716246 - AluSc SINE Alu -6 303 179 293 299 58 29 chr10 32600994 32601168 -107715597 - MIR SINE MIR -37 225 47 1559 169 47 30 chr10 32601172 32601282 -107715483 + AluJo SINE Alu 1 108 -204 234 0 0 0 chr10 32601282 32601308 -107715457 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1559 169 47 30 chr10 32601308 32601498 -107715267 + AluJo SINE Alu 108 306 -6 2024 93 82 0 chr10 32601513 32601792 -107714973 + AluSp SINE Alu 5 306 -7 336 290 57 91 chr10 32602503 32602673 -107714092 + L2 LINE L2 2817 2991 -281 2438 119 50 45 chr10 32602673 32602724 -107714041 + MSTB LTR MaLR 5 54 -372 2418 100 0 3 chr10 32602724 32603035 -107713730 + AluSx SINE Alu 1 310 -2 2438 119 50 45 chr10 32603035 32603403 -107713362 + MSTB LTR MaLR 54 426 0 336 290 57 91 chr10 32603403 32603704 -107713061 + L2 LINE L2 2991 3272 0 2058 102 7 4 chr10 32603810 32604084 -107712681 + AluSq SINE Alu 29 303 -10 26 0 0 0 chr10 32604800 32604826 -107711939 + AT_rich Low_complexity Low_complexity 1 26 0 2156 115 0 3 chr10 32604826 32605113 -107711652 - AluSx SINE Alu -26 286 1 1747 171 4 11 chr10 32605374 32605688 -107711077 + AluJo SINE Alu 5 316 0 2344 103 3 0 chr10 32605791 32606093 -107710672 + AluSx SINE Alu 1 303 -9 365 175 165 10 chr10 32606903 32607000 -107709765 + MLT1L LTR MaLR 491 602 -13 1863 135 17 7 chr10 32607199 32607487 -107709278 - AluJo SINE Alu -16 296 6 442 246 116 113 chr10 32609185 32609446 -107707319 - MLT1J1 LTR MaLR 0 446 182 2351 99 0 0 chr10 32609446 32609749 -107707016 - AluSc SINE Alu -6 303 1 442 246 116 113 chr10 32609749 32609849 -107706916 - MLT1J1 LTR MaLR -264 182 84 2808 173 27 60 chr10 32609849 32610481 -107706284 + LTR36 LTR ERV1 1 611 0 2055 116 0 4 chr10 32611006 32611283 -107705482 - AluSx SINE Alu -36 276 1 1044 172 23 0 chr10 32611503 32611677 -107705088 + MSTB LTR MaLR 2 179 -247 671 169 25 0 chr10 32611666 32611784 -107704981 + MSTB LTR MaLR 312 432 0 * 1929 268 117 50 chr10 32612377 32613089 -107703676 + L1MEd LINE L1 157 820 -5490 1256 210 15 96 chr10 32613089 32613318 -107703447 + AluJo SINE Alu 1 196 -116 1821 159 0 46 chr10 32613318 32613645 -107703120 + AluJb SINE Alu 1 312 0 1256 210 15 96 chr10 32613645 32613749 -107703016 + AluJo SINE Alu 196 307 -5 1929 268 117 50 chr10 32613749 32613882 -107702883 + L1MEd LINE L1 820 943 -5367 1135 177 39 9 chr10 32613882 32614114 -107702651 + L1MB5 LINE L1 5928 6166 -8 1929 268 117 50 chr10 32614114 32614538 -107702227 + L1MEd LINE L1 943 1570 -4740 2360 106 3 0 chr10 32614538 32614839 -107701926 + AluSx SINE Alu 1 302 -10 2187 110 3 7 chr10 32615206 32615507 -107701258 + AluSx SINE Alu 10 309 -3 21 36 0 0 chr10 32615791 32615819 -107700946 + AT_rich Low_complexity Low_complexity 1 28 0 406 253 180 16 chr10 32616018 32616212 -107700553 + L1ME4a LINE L1 5547 5772 -349 473 228 39 8 chr10 32616259 32616386 -107700379 - MIR SINE MIR -10 252 122 210 319 9 71 chr10 32616432 32616545 -107700220 - MIR SINE MIR -128 134 29 231 227 176 25 chr10 32616734 32616853 -107699912 + L1ME4a LINE L1 5984 6120 -1 1252 157 32 101 chr10 32616948 32617134 -107699631 + L1MA9 LINE L1 5998 6152 -160 1954 162 0 0 chr10 32617134 32617437 -107699328 + AluJb SINE Alu 2 304 -8 1252 157 32 101 chr10 32617437 32617588 -107699177 + L1MA9 LINE L1 6152 6312 0 21 26 0 26 chr10 32617588 32617600 -107699165 + AT_rich Low_complexity Low_complexity 1 12 -26 1867 145 3 26 chr10 32617600 32617911 -107698854 - AluJb SINE Alu -8 304 1 21 26 0 26 chr10 32617911 32617937 -107698828 + AT_rich Low_complexity Low_complexity 12 38 0 221 250 0 18 chr10 32618245 32618301 -107698464 - L2 LINE L2 -1 3271 3217 692 127 71 16 chr10 32619049 32619175 -107697590 + FLAM_C SINE Alu 1 133 0 904 211 6 6 chr10 32619317 32619492 -107697273 - AluSg/x SINE Alu -17 293 119 835 128 0 48 chr10 32619497 32619506 -107697259 + (GAAA)n Simple_repeat Simple_repeat 2 10 -170 2251 139 0 0 chr10 32619506 32619816 -107696949 + AluSx SINE Alu 1 310 -2 835 128 0 48 chr10 32619816 32619994 -107696771 + (GAAA)n Simple_repeat Simple_repeat 10 180 0 227 270 48 0 chr10 32620818 32620881 -107695884 + MIR3 SINE MIR 122 187 -21 403 235 61 0 chr10 32620978 32621076 -107695689 + MIR SINE MIR 38 141 -67 2263 102 3 0 chr10 32621089 32621384 -107695381 + AluSx SINE Alu 1 296 -16 281 169 0 70 chr10 32621414 32621485 -107695280 + FLAM SINE Alu 68 133 0 595 269 75 11 chr10 32621501 32621783 -107694982 + L1MC4a LINE L1 4360 4659 -1487 1327 148 51 5 chr10 32621798 32622014 -107694751 + AluSg/x SINE Alu 82 307 -3 257 298 26 0 chr10 32622202 32622316 -107694449 + L1P LINE L1 4885 5001 -1145 1856 140 32 4 chr10 32622329 32622608 -107694157 - AluSx SINE Alu -25 287 1 38 22 0 0 chr10 32622730 32622775 -107693990 + AT_rich Low_complexity Low_complexity 1 45 0 926 242 108 71 chr10 32622845 32623082 -107693683 + L1MC4a LINE L1 5254 5481 -2327 2017 130 6 32 chr10 32623082 32623398 -107693367 + AluSx SINE Alu 1 308 -4 926 242 108 71 chr10 32623398 32623763 -107693002 + L1MC4a LINE L1 5481 5878 -1930 1038 153 0 19 chr10 32623980 32624169 -107692596 + AluSg/x SINE Alu 130 315 0 1582 164 20 27 chr10 32624496 32624789 -107691976 + AluJb SINE Alu 1 291 -21 518 236 154 50 chr10 32625147 32625269 -107691496 + MER5C DNA MER1_type 39 147 -177 2137 112 0 7 chr10 32625269 32625577 -107691188 - AluSx SINE Alu 0 306 1 518 236 154 50 chr10 32625577 32625712 -107691053 + MER5C DNA MER1_type 147 324 0 1421 135 42 75 chr10 32625759 32625973 -107690792 + MER33 DNA MER1_type 1 202 -2383 832 161 0 7 chr10 32625973 32626122 -107690643 + L1MB3 LINE L1 6033 6180 -3 1421 135 42 75 chr10 32626122 32626240 -107690525 + MER33 DNA MER1_type 202 322 -2 230 81 27 0 chr10 32626428 32626465 -107690300 + (TG)n Simple_repeat Simple_repeat 1 38 0 2011 142 137 11 chr10 32626763 32627143 -107689622 + MSTA LTR MaLR 1 428 0 669 128 10 0 chr10 32627365 32627467 -107689298 + AluJb SINE Alu 5 107 -205 201 74 0 0 chr10 32627467 32627494 -107689271 + (GA)n Simple_repeat Simple_repeat 2 28 0 249 62 0 0 chr10 32627498 32627530 -107689235 + (GGGAA)n Simple_repeat Simple_repeat 3 34 0 528 124 35 18 chr10 32627530 32627643 -107689122 + GA-rich Low_complexity Low_complexity 3 117 0 215 267 126 44 chr10 32627657 32627792 -107688973 - L2 LINE L2 -191 3081 2936 291 209 45 27 chr10 32627805 32627915 -107688850 + L1MEd LINE L1 14 125 -5994 2003 129 17 0 chr10 32628050 32628337 -107688428 - AluSx SINE Alu -13 299 8 1340 225 40 67 chr10 32628337 32628741 -107688024 + MLT2C2 LTR ERVL 3 394 -70 411 21 0 0 chr10 32628741 32628789 -107687976 + (CA)n Simple_repeat Simple_repeat 2 49 0 1340 225 40 67 chr10 32628789 32628859 -107687906 + MLT2C2 LTR ERVL 394 464 0 311 290 97 0 chr10 32629027 32629120 -107687645 + L1MEd LINE L1 433 534 -5585 24 32 0 0 chr10 32629133 32629164 -107687601 + AT_rich Low_complexity Low_complexity 1 31 0 1346 243 34 42 chr10 32629169 32629304 -107687461 - L1ME1 LINE L1 -19 6942 6807 1838 176 7 10 chr10 32629304 32629606 -107687159 - AluJb SINE Alu -11 301 1 1346 243 34 42 chr10 32629606 32629918 -107686847 - L1ME1 LINE L1 -154 6807 6499 5440 219 100 36 chr10 32629919 32631683 -107685082 - L1ME1 LINE L1 -894 6047 4171 467 160 14 1 chr10 32631710 32631792 -107684973 + MLT1A1 LTR MaLR 241 463 -42 2292 124 0 0 chr10 32631823 32632129 -107684636 - AluSx SINE Alu -6 306 1 269 228 79 10 chr10 32632130 32632231 -107684534 - L1ME1 LINE L1 -2845 4096 3989 1882 241 94 29 chr10 32632266 32632781 -107683984 - L1ME1 LINE L1 -4821 2120 1640 2058 147 3 0 chr10 32632781 32633087 -107683678 - AluSx SINE Alu -5 307 1 1882 241 94 29 chr10 32633087 32633514 -107683251 - L1ME1 LINE L1 -5301 1640 1242 2074 138 3 0 chr10 32633514 32633805 -107682960 + AluSx SINE Alu 1 292 -20 1882 241 94 29 chr10 32633805 32634067 -107682698 - L1ME1 LINE L1 -5699 1242 844 431 252 93 81 chr10 32634273 32634519 -107682246 - L1ME1 LINE L1 -5900 523 275 1523 211 0 16 chr10 32634519 32634827 -107681938 - AluJo SINE Alu -9 303 1 456 99 0 0 chr10 32634837 32634908 -107681857 + (TA)n Simple_repeat Simple_repeat 1 71 0 292 94 0 57 chr10 32634913 32634966 -107681799 - FLAM_A SINE Alu -2 131 82 312 309 34 28 chr10 32635027 32635205 -107681560 - L1ME1 LINE L1 -6221 202 24 * 805 209 34 28 chr10 32635193 32635370 -107681395 - L1ME LINE L1 -522 5642 5465 * 4173 198 46 53 chr10 32635367 32637649 -107679116 - L1MB4 LINE L1 -192 5988 3730 366 272 45 24 chr10 32637754 32637955 -107678810 + L1MEd LINE L1 1074 1311 -4862 2266 119 3 0 chr10 32637973 32638276 -107678489 + AluSx SINE Alu 1 304 -8 459 0 0 0 chr10 32638582 32638633 -107678132 + (TA)n Simple_repeat Simple_repeat 2 52 0 391 74 0 0 chr10 32638634 32638688 -107678077 - Alu SINE Alu 0 302 249 1872 164 22 16 chr10 32638803 32639169 -107677596 + L1 LINE L1 3958 4325 -1821 2260 81 7 17 chr10 32639173 32639508 -107677257 - AluSx SINE Alu 0 312 1 2339 94 16 0 chr10 32639613 32639920 -107676845 - AluSx SINE Alu 0 312 1 2104 127 0 0 chr10 32640652 32640935 -107675830 - AluSx SINE Alu -29 283 1 4424 103 111 107 chr10 32641165 32642557 -107674208 + pTR5 LTR ERV1 79 2438 0 1302 174 97 17 chr10 32642893 32643181 -107673584 - AluJo SINE Alu -1 311 1 2088 110 11 0 chr10 32643335 32643638 -107673127 - AluSq SINE Alu 0 306 1 1577 196 0 18 chr10 32644519 32644799 -107671966 - AluJo SINE Alu -17 295 21 1786 133 36 33 chr10 32644807 32645109 -107671656 - AluJb SINE Alu -9 303 1 5719 201 53 76 chr10 32645111 32645615 -107671150 - L1MC3 LINE L1 -216 7569 7055 288 0 0 0 chr10 32645615 32645647 -107671118 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2183 108 0 0 chr10 32645652 32645929 -107670836 - AluSg SINE Alu -33 277 1 5719 201 53 76 chr10 32645929 32646496 -107670269 - L1MC3 LINE L1 -734 7051 6472 751 187 0 15 chr10 32646496 32646630 -107670135 - FLAM_C SINE Alu -1 132 1 5719 201 53 76 chr10 32646630 32646819 -107669946 - L1MC3 LINE L1 -1313 6472 6280 2372 61 41 3 chr10 32646819 32647112 -107669653 + AluY SINE Alu 1 304 -7 5719 201 53 76 chr10 32647112 32647452 -107669313 - L1MC3 LINE L1 -1505 6280 5998 28 61 0 0 chr10 32647553 32647602 -107669163 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32648244 32648295 -107668470 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32648316 32648628 -107668137 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32648774 32648906 -107667859 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32648992 32649025 -107667740 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32649126 32649420 -107667345 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32649595 32649815 -107666950 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32650017 32650040 -107666725 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32650040 32650158 -107666607 - FLAM_C SINE Alu -25 118 1 645 263 109 53 chr10 32650766 32651086 -107665679 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32651095 32651123 -107665642 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 264 266 46 28 chr10 32651197 32651306 -107665459 - MIR3 SINE MIR -8 200 90 360 339 26 2 chr10 32651620 32651817 -107664948 - MIR SINE MIR -13 249 8 378 74 0 0 chr10 32652005 32652059 -107664706 + (TG)n Simple_repeat Simple_repeat 2 55 0 1600 176 4 11 chr10 32652124 32652427 -107664338 + AluJb SINE Alu 7 307 0 1171 177 30 61 chr10 32652518 32652880 -107663885 - L1MC5 LINE L1 -198 7763 7413 257 224 0 0 chr10 32652878 32652936 -107663829 - L1MC5 LINE L1 -1884 5924 5867 * 1652 116 14 94 chr10 32653021 32653283 -107663482 - L1MA4 LINE L1 -3 6297 6070 1526 195 17 28 chr10 32653283 32653570 -107663195 - AluJo SINE Alu -15 297 14 1652 116 14 94 chr10 32653570 32653670 -107663095 - L1MA4 LINE L1 -230 6070 5964 493 253 90 92 chr10 32653731 32654067 -107662698 - L1MC5 LINE L1 -2058 5750 5414 845 130 0 8 chr10 32654067 32654190 -107662575 - FLAM_C SINE Alu -11 122 1 493 253 90 92 chr10 32654190 32654307 -107662458 - L1MC5 LINE L1 -2394 5414 5298 2201 105 0 30 chr10 32654467 32654771 -107661994 + AluSx SINE Alu 1 295 -17 276 318 64 10 chr10 32654866 32655174 -107661591 - MLT1I LTR MaLR -7 402 52 198 0 0 0 chr10 32656480 32656502 -107660263 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 898 180 132 44 chr10 32656507 32656779 -107659986 - MER51A LTR ERV1 -82 552 257 189 0 0 0 chr10 32657203 32657224 -107659541 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 32657517 32657538 -107659227 + (TA)n Simple_repeat Simple_repeat 2 22 0 2038 117 7 3 chr10 32657538 32657828 -107658937 - AluSx SINE Alu -21 291 1 2005 127 30 3 chr10 32657845 32658145 -107658620 - AluSx SINE Alu -4 308 1 180 0 0 0 chr10 32658566 32658586 -107658179 + (T)n Simple_repeat Simple_repeat 1 20 0 509 147 9 18 chr10 32658888 32658997 -107657768 + L1MA7 LINE L1 4660 4767 -1379 654 130 32 8 chr10 32659004 32659127 -107657638 + L1MA7 LINE L1 5814 5939 -352 347 283 75 0 chr10 32659182 32659288 -107657477 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32659377 32659447 -107657318 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32659462 32659588 -107657177 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32659611 32659696 -107657069 + (TA)n Simple_repeat Simple_repeat 2 90 0 540 218 45 6 chr10 32659696 32659852 -107656913 - FAM SINE Alu -23 162 1 284 299 0 0 chr10 32660239 32660346 -107656419 + C-rich Low_complexity Low_complexity 4 110 0 1655 165 0 0 chr10 32660367 32660627 -107656138 - AluSx SINE Alu -52 260 1 389 289 142 25 chr10 32660709 32660948 -107655817 + L1ME LINE L1 5469 5735 -427 1607 187 87 9 chr10 32661007 32661434 -107655331 - L1 LINE L1 -1329 4817 4358 342 67 0 0 chr10 32661535 32661580 -107655185 + (TA)n Simple_repeat Simple_repeat 2 46 0 2228 129 0 0 chr10 32661583 32661885 -107654880 - AluSx SINE Alu -9 303 2 370 276 112 56 chr10 32662216 32662706 -107654059 + L1MDa LINE L1 2452 2913 -3627 1971 147 0 0 chr10 32662706 32663031 -107653734 + AluSx SINE Alu 1 325 0 370 276 112 56 chr10 32663031 32663820 -107652945 + L1MDa LINE L1 2913 3797 -2743 672 190 9 0 chr10 32663841 32663957 -107652808 + FLAM_C SINE Alu 1 117 -26 297 0 0 0 chr10 32663961 32663994 -107652771 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 264 264 27 9 chr10 32663996 32664106 -107652659 + L1MDa LINE L1 3820 3931 -2609 821 144 31 19 chr10 32664292 32664452 -107652313 - MSTD LTR MaLR -234 162 1 351 0 0 0 chr10 32664495 32664523 -107652242 + (TG)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr10 32664523 32664562 -107652203 + (TG)n Simple_repeat Simple_repeat 2 40 0 654 183 7 28 chr10 32664587 32664729 -107652036 + MLT1B LTR MaLR 192 330 -60 1965 85 11 0 chr10 32664730 32665012 -107651753 + THE1B-int LTR MaLR 1296 1580 0 1834 142 49 26 chr10 32665012 32665356 -107651409 + THE1B LTR MaLR 1 352 -12 11271 148 24 13 chr10 32665361 32668608 -107648157 + L1MA3 LINE L1 3020 6305 0 7840 180 23 22 chr10 32668605 32668620 -107648145 + L1 LINE L1 2915 2928 -3218 * 2108 79 28 3 chr10 32668620 32668910 -107647855 + AluY SINE Alu 1 297 -14 7840 180 23 22 chr10 32668910 32670745 -107646020 + L1 LINE L1 2928 4767 -1379 654 130 32 8 chr10 32670752 32670875 -107645890 + L1MA7 LINE L1 5814 5939 -352 361 274 75 0 chr10 32670930 32671036 -107645729 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32671125 32671195 -107645570 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32671210 32671336 -107645429 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32671359 32671444 -107645321 + (TA)n Simple_repeat Simple_repeat 1 89 0 803 211 12 6 chr10 32671444 32671605 -107645160 - FAM SINE Alu -13 162 1 376 268 10 0 chr10 32671614 32671711 -107645054 - MIR SINE MIR -11 251 154 238 225 40 92 chr10 32671711 32671884 -107644881 - MER104 DNA Tc2 -13 167 4 317 229 60 24 chr10 32671886 32671969 -107644796 - MIR SINE MIR -107 155 70 1723 132 0 129 chr10 32672016 32672356 -107644409 + AluJo SINE Alu 1 296 -6 1671 134 43 0 chr10 32673036 32673289 -107643476 + AluSg SINE Alu 37 300 -10 225 132 38 38 chr10 32673632 32673685 -107643080 + MADE1 DNA Mariner 1 53 -27 22 0 0 0 chr10 32673771 32673793 -107642972 + AT_rich Low_complexity Low_complexity 1 22 0 28293 118 14 61 chr10 32673825 32680236 -107636529 + L1PA8 LINE L1 12 6105 -67 281 147 44 0 chr10 32680237 32680305 -107636460 + L1P LINE L1 4641 4711 -1435 * 383 88 0 12 chr10 32680290 32680361 -107636404 + L1PA8 LINE L1 6090 6167 -1 2970 135 0 17 chr10 32680368 32680850 -107635915 + LTR8 LTR ERV1 154 627 -64 1913 129 34 74 chr10 32680852 32681035 -107635730 + THE1B LTR MaLR 1 164 -200 2272 50 14 0 chr10 32681035 32681369 -107635396 + AluY SINE Alu 1 338 0 1913 129 34 74 chr10 32681369 32681563 -107635202 + THE1B LTR MaLR 164 364 0 3094 89 0 0 chr10 32681563 32681989 -107634776 + THE1B-int LTR MaLR 1 426 -1154 193 283 33 65 chr10 32682041 32682133 -107634632 - MIR3 SINE MIR -18 190 102 4770 146 13 68 chr10 32682340 32682487 -107634278 - MER4D LTR ERV1 0 903 749 2148 124 20 0 chr10 32682487 32682786 -107633979 - AluSx SINE Alu -7 305 1 4770 146 13 68 chr10 32682786 32683594 -107633171 - MER4D LTR ERV1 -154 749 1 22 0 0 0 chr10 32683721 32683743 -107633022 + AT_rich Low_complexity Low_complexity 1 22 0 2300 95 0 3 chr10 32683765 32684061 -107632704 + AluSc SINE Alu 1 295 -14 427 206 31 49 chr10 32684462 32684600 -107632165 + MIR SINE MIR 63 200 -62 226 154 0 0 chr10 32684653 32684692 -107632073 - MSTA LTR MaLR 0 426 388 1569 132 0 4 chr10 32684692 32684919 -107631846 + AluSg/x SINE Alu 87 312 0 207 100 0 0 chr10 32684924 32684954 -107631811 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 2297 137 17 27 chr10 32684954 32685357 -107631408 - MSTA LTR MaLR -29 399 1 1290 191 83 13 chr10 32685720 32685792 -107630973 + MER58B DNA MER1_type 6 72 -2348 219 36 0 0 chr10 32685792 32685820 -107630945 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1290 191 83 13 chr10 32685820 32686061 -107630704 + MER58B DNA MER1_type 72 341 0 765 299 52 0 chr10 32686106 32686317 -107630448 - MIR SINE MIR -10 252 31 414 0 0 0 chr10 32686569 32686615 -107630150 + (TG)n Simple_repeat Simple_repeat 1 46 0 879 266 80 71 chr10 32687617 32688169 -107628596 + LTR1B LTR ERV1 33 589 -237 278 349 0 0 chr10 32688418 32688504 -107628261 - L2 LINE L2 -26 3287 3202 2193 200 184 83 chr10 32688586 32689512 -107627253 - LTR28 LTR ERV1 0 1020 2 554 288 36 4 chr10 32689977 32690146 -107626619 - MER5B DNA MER1_type 0 178 17 263 214 71 51 chr10 32690172 32690270 -107626495 - MLT1I LTR MaLR -270 139 40 2301 202 115 40 chr10 32691133 32691314 -107625451 + HAL1 LINE L1 965 1131 -1376 2105 120 17 3 chr10 32691314 32691615 -107625150 + AluSq SINE Alu 1 305 -8 2301 202 115 40 chr10 32691615 32692283 -107624482 + HAL1 LINE L1 1131 1878 -629 1878 133 29 16 chr10 32693078 32693386 -107623379 + AluSq SINE Alu 1 312 -1 271 189 54 14 chr10 32693415 32693489 -107623276 + L1MC/D LINE L1 5812 5888 -1920 2333 114 0 0 chr10 32693682 32693989 -107622776 - AluSx SINE Alu -5 307 1 447 276 142 25 chr10 32694071 32694310 -107622455 + L1ME LINE L1 5469 5735 -427 6830 166 36 29 chr10 32694369 32694832 -107621933 - L1 LINE L1 -1329 4817 4359 2171 86 7 17 chr10 32694832 32695163 -107621602 + AluSx SINE Alu 5 312 0 6830 166 36 29 chr10 32695163 32695539 -107621226 - L1 LINE L1 -1787 4359 3987 2054 118 3 3 chr10 32695539 32695852 -107620913 - AluSx SINE Alu 0 313 1 6830 166 36 29 chr10 32695852 32695919 -107620846 - L1 LINE L1 -2159 3987 3922 2816 110 36 0 chr10 32695919 32696338 -107620427 + MER57B LTR ERV1 1 434 0 6830 166 36 29 chr10 32696338 32696966 -107619799 - L1 LINE L1 -2224 3922 3269 1473 174 25 165 chr10 32696970 32697486 -107619279 - MER70B LTR ERVL -134 444 1 823 208 60 18 chr10 32697489 32697702 -107619063 - L1 LINE L1 -2882 3264 3035 1822 100 112 4 chr10 32697702 32697971 -107618794 - AluSg SINE Alu -12 298 1 823 208 60 18 chr10 32697971 32698041 -107618724 - L1 LINE L1 -3111 3035 2969 1172 229 48 0 chr10 32698042 32698374 -107618391 + L1ME1 LINE L1 4950 5297 -849 5839 146 38 12 chr10 32698378 32700088 -107616677 - L1PB2 LINE L1 0 6151 4372 258 56 0 0 chr10 32700088 32700124 -107616641 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 5839 146 38 12 chr10 32700124 32700519 -107616246 - L1PB2 LINE L1 -1779 4372 3988 559 230 0 0 chr10 32700534 32700669 -107616096 + L1ME1 LINE L1 5326 5460 -702 869 215 45 21 chr10 32700669 32700911 -107615854 + LTR52 LTR ERVL 1 248 -173 1207 144 0 26 chr10 32700911 32701106 -107615659 - AluJb SINE Alu -7 305 116 543 135 58 0 chr10 32701106 32701210 -107615555 + FLAM_C SINE Alu 2 111 -32 498 169 40 197 chr10 32701379 32701416 -107615349 + LTR52 LTR ERVL 212 253 -168 1850 146 0 56 chr10 32701416 32701610 -107615155 - AluJb SINE Alu -7 305 135 1867 151 0 35 chr10 32701610 32701922 -107614843 + AluJo SINE Alu 1 301 -11 1850 146 0 56 chr10 32701922 32702050 -107614715 - AluJb SINE Alu -177 135 1 498 169 40 197 chr10 32702050 32702077 -107614688 + LTR52 LTR ERVL 253 283 -138 698 106 19 0 chr10 32702077 32702181 -107614584 - U6 snRNA snRNA -1 106 1 498 169 40 197 chr10 32702181 32702364 -107614401 + LTR52 LTR ERVL 283 421 0 1094 211 96 148 chr10 32702367 32702696 -107614069 + L1ME1 LINE L1 5460 5807 -359 481 116 0 0 chr10 32702696 32702765 -107614000 + AluJ/FRAM SINE Alu 229 297 -15 1094 211 96 148 chr10 32702765 32703064 -107613701 + L1ME1 LINE L1 5807 6120 -46 391 250 96 0 chr10 32702965 32703101 -107613664 + L1MA10 LINE L1 6169 6317 -17 * 203 238 24 0 chr10 32703199 32703241 -107613524 - L2 LINE L2 -1152 2162 2120 1112 228 152 90 chr10 32703285 32704133 -107612632 - HAL1 LINE L1 -744 1763 863 620 149 203 0 chr10 32704146 32704294 -107612471 - MLT1E LTR MaLR -5 500 323 749 128 45 0 chr10 32704591 32704724 -107612041 + MER85 DNA T2_type 1 139 0 709 269 51 62 chr10 32704792 32705148 -107611617 - MLT1E LTR MaLR -237 356 6 225 288 0 17 chr10 32705294 32705353 -107611412 - L2 LINE L2 -16 3256 3199 22 0 0 0 chr10 32705972 32705994 -107610771 + AT_rich Low_complexity Low_complexity 1 22 0 1142 133 0 6 chr10 32706875 32707033 -107609732 + AluSx SINE Alu 1 157 -155 204 182 0 0 chr10 32707084 32707128 -107609637 + GA-rich Low_complexity Low_complexity 1 44 0 233 146 21 0 chr10 32707187 32707235 -107609530 + GA-rich Low_complexity Low_complexity 3 51 0 566 254 109 55 chr10 32707845 32707943 -107608822 + L1MEd LINE L1 922 1013 -5106 2346 107 0 0 chr10 32707943 32708252 -107608513 + AluSx SINE Alu 1 309 -3 566 254 109 55 chr10 32708252 32708428 -107608337 + L1MEd LINE L1 1013 1211 -4908 951 227 65 57 chr10 32708500 32709006 -107607759 + L1MC5 LINE L1 7404 7913 -48 2145 126 7 0 chr10 32709374 32709667 -107607098 - AluSx SINE Alu -17 295 1 2313 94 16 0 chr10 32709772 32710079 -107606686 - AluSx SINE Alu 0 312 1 2251 96 0 0 chr10 32710811 32711092 -107605673 - AluSg SINE Alu -29 281 1 963 108 38 181 chr10 32711216 32711559 -107605206 - L1PBa LINE L1 -4763 2100 1807 1047 158 5 35 chr10 32711566 32711768 -107604997 + AluJb SINE Alu 108 303 -9 2171 127 0 0 chr10 32711854 32712154 -107604611 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 32713022 32713043 -107603722 + AT_rich Low_complexity Low_complexity 1 21 0 2135 112 14 0 chr10 32713140 32713435 -107603330 + AluSx SINE Alu 1 299 -13 2169 111 3 23 chr10 32713446 32713752 -107603013 + AluSx SINE Alu 1 300 -12 280 254 149 45 chr10 32714328 32714462 -107602303 - MIR SINE MIR -21 241 94 834 189 26 0 chr10 32714510 32714663 -107602102 - AluSg/x SINE Alu -18 294 138 2172 101 44 0 chr10 32714701 32714998 -107601767 + AluSq SINE Alu 1 310 -3 997 219 20 65 chr10 32715040 32715134 -107601631 - MER8 DNA MER2_type 0 239 142 2267 77 40 7 chr10 32715134 32715432 -107601333 + AluY SINE Alu 1 308 -3 997 219 20 65 chr10 32715432 32715584 -107601181 - MER8 DNA MER2_type -97 142 4 772 189 0 0 chr10 32716091 32716218 -107600547 - FLAM_A SINE Alu -3 130 4 23 0 0 0 chr10 32717266 32717289 -107599476 + AT_rich Low_complexity Low_complexity 1 23 0 2169 107 3 0 chr10 32717440 32717729 -107599036 + AluSx SINE Alu 23 312 0 240 59 0 0 chr10 32718333 32718367 -107598398 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 204 286 0 36 chr10 32718620 32718676 -107598089 + MIR SINE MIR 87 140 -68 2143 136 0 0 chr10 32719068 32719370 -107597395 - AluSx SINE Alu -10 302 1 2246 106 17 0 chr10 32719435 32719736 -107597029 + AluSx SINE Alu 1 306 -6 2171 112 0 14 chr10 32720684 32720980 -107595785 - AluSx SINE Alu -20 292 1 1278 162 21 30 chr10 32722826 32723060 -107593705 + AluJb SINE Alu 27 258 -54 1729 176 20 0 chr10 32723071 32723367 -107593398 + AluJb SINE Alu 5 306 -6 190 333 117 18 chr10 32723403 32723514 -107593251 - L2 LINE L2 -556 2758 2637 223 322 223 0 chr10 32723813 32723934 -107592831 + L2 LINE L2 3123 3270 -2 291 54 0 0 chr10 32724060 32724097 -107592668 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 624 38 0 0 chr10 32724101 32724181 -107592584 - HY3 scRNA scRNA -2 99 20 233 139 0 0 chr10 32724667 32724703 -107592062 + Alu SINE Alu 177 212 -88 2130 112 30 3 chr10 32725676 32725980 -107590785 + AluSx SINE Alu 1 312 0 1536 139 19 15 chr10 32725992 32726251 -107590514 + AluSx SINE Alu 1 260 -52 2302 82 0 3 chr10 32726459 32726752 -107590013 - AluY SINE Alu -19 292 1 1567 203 0 3 chr10 32726841 32727127 -107589638 + AluJo SINE Alu 1 285 -27 1548 139 24 133 chr10 32727178 32727510 -107589255 + AluJo SINE Alu 1 296 -6 25 0 0 0 chr10 32727513 32727538 -107589227 + AT_rich Low_complexity Low_complexity 1 25 0 1817 118 61 17 chr10 32727664 32727961 -107588804 + AluSx SINE Alu 1 310 -2 2031 134 3 13 chr10 32728407 32728714 -107588051 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr10 32729240 32729264 -107587501 + AT_rich Low_complexity Low_complexity 1 24 0 2084 116 0 38 chr10 32730149 32730486 -107586279 + AluSx SINE Alu 2 327 0 2263 118 0 0 chr10 32730508 32730804 -107585961 + AluSx SINE Alu 3 298 -14 483 304 145 31 chr10 32731092 32731451 -107585314 + L1ME LINE L1 5318 5717 -404 1926 102 0 16 chr10 32731926 32732181 -107584584 + AluSx SINE Alu 23 273 -39 29 0 0 0 chr10 32733385 32733414 -107583351 + AT_rich Low_complexity Low_complexity 1 29 0 1706 171 63 0 chr10 32734219 32734506 -107582259 + AluJo SINE Alu 1 305 -7 406 352 62 6 chr10 32735704 32735866 -107580899 - MIR3 SINE MIR -17 191 21 428 88 0 0 chr10 32736164 32736221 -107580544 + U6 snRNA snRNA 50 106 -1 1785 116 20 3 chr10 32736222 32736523 -107580242 + L1PBa LINE L1 1608 1913 -4950 5437 82 152 8 chr10 32736529 32737445 -107579320 + L1P LINE L1 1 1048 -5098 246 180 82 0 chr10 32742853 32742914 -107573851 + MER94 DNA DNA 1 66 -68 1693 183 3 24 chr10 32742925 32743220 -107573545 + AluJo SINE Alu 1 289 -23 227 340 140 68 chr10 32743289 32743524 -107573241 + L2 LINE L2 3007 3258 -14 478 114 25 13 chr10 32743990 32744069 -107572696 + AluS SINE Alu 220 299 -13 800 88 0 96 chr10 32744189 32744325 -107572440 + AluSg/x SINE Alu 187 309 0 995 121 0 0 chr10 32744340 32744472 -107572293 + AluSg SINE Alu 2 133 -177 2206 105 20 3 chr10 32744472 32744776 -107571989 + AluSx SINE Alu 1 309 -3 549 311 52 16 chr10 32744822 32745131 -107571634 + L1ME LINE L1 47 366 -5704 485 254 105 28 chr10 32745143 32745391 -107571374 - LTR41 LTR ERVL -7 766 500 1263 246 126 9 chr10 32745519 32746447 -107570318 + L1ME LINE L1 2117 3184 -2896 10294 157 26 11 chr10 32746563 32749722 -107567043 + L1MA3 LINE L1 3091 6298 -7 2319 83 27 5 chr10 32749752 32750324 -107566441 - L1P3 LINE L1 -551 5603 5024 246 200 84 21 chr10 32750511 32750606 -107566159 - LTR41 LTR ERVL -672 101 1 2231 108 20 0 chr10 32750825 32751131 -107565634 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 32751328 32751349 -107565416 + AT_rich Low_complexity Low_complexity 1 21 0 2203 127 0 0 chr10 32751778 32752086 -107564679 - AluSc SINE Alu 0 309 2 5108 84 3 0 chr10 32752346 32753004 -107563761 + PABL_A LTR ERV1 1 660 0 227 357 164 7 chr10 32753056 32753196 -107563569 + MIR SINE MIR 47 208 -54 1575 177 111 143 chr10 32753572 32754302 -107562463 - LTR8A LTR ERV1 -20 707 1 8353 104 2 25 chr10 32754645 32755838 -107560927 + L1P3 LINE L1 5 1170 -5291 294 247 27 0 chr10 32756546 32756619 -107560146 - MLT1K LTR MaLR -6 582 508 407 152 0 0 chr10 32756689 32756755 -107560010 - AluJ/FLAM SINE Alu -245 67 2 225 211 0 0 chr10 32756949 32756987 -107559778 + tRNA-Glu-GAG tRNA tRNA 3 40 -35 418 210 0 34 chr10 32756997 32757122 -107559643 + L1MC/D LINE L1 5724 5837 -305 1074 277 37 35 chr10 32757859 32758263 -107558502 + MLT1I LTR MaLR 1 405 -4 2076 87 28 3 chr10 32758800 32759089 -107557676 - AluSx SINE Alu -16 296 1 27 29 0 0 chr10 32759362 32759396 -107557369 + AT_rich Low_complexity Low_complexity 1 34 0 2034 100 0 4 chr10 32759535 32759816 -107556949 - AluSx SINE Alu -32 280 1 741 174 23 0 chr10 32759926 32760058 -107556707 + AluJb SINE Alu 2 136 -176 2390 58 0 0 chr10 32760062 32760356 -107556409 + AluY SINE Alu 1 294 -17 30 0 0 0 chr10 32760356 32760386 -107556379 + AT_rich Low_complexity Low_complexity 1 30 0 889 284 51 24 chr10 32760472 32760726 -107556039 - MIR SINE MIR -1 261 1 1404 170 46 32 chr10 32760846 32761128 -107555637 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr10 32761131 32761160 -107555605 + AT_rich Low_complexity Low_complexity 1 29 0 2034 128 0 0 chr10 32761601 32761905 -107554860 + AluSx SINE Alu 1 304 -8 1864 145 7 10 chr10 32762427 32762737 -107554028 + AluSx SINE Alu 1 309 -3 1029 262 135 64 chr10 32762916 32762961 -107553804 + L1MDa LINE L1 2431 2471 -4069 1998 112 3 3 chr10 32762961 32763257 -107553508 + AluSx SINE Alu 12 307 -5 1029 262 135 64 chr10 32763257 32763940 -107552825 + L1MDa LINE L1 2471 3218 -3322 2177 89 3 0 chr10 32764365 32764656 -107552109 + AluSp SINE Alu 1 292 -21 700 175 35 0 chr10 32764679 32764793 -107551972 + FLAM_C SINE Alu 1 118 -15 35 0 0 0 chr10 32764804 32764839 -107551926 + AT_rich Low_complexity Low_complexity 1 35 0 1481 160 46 25 chr10 32765206 32765487 -107551278 + AluJo SINE Alu 1 287 -25 497 24 48 24 chr10 32765487 32765570 -107551195 + (CATAA)n Simple_repeat Simple_repeat 2 86 0 329 241 63 99 chr10 32765590 32765614 -107551151 + L1MDa LINE L1 3491 3514 -3026 2119 107 0 3 chr10 32765614 32765922 -107550843 + AluSq SINE Alu 1 307 -6 329 241 63 99 chr10 32765922 32766064 -107550701 + L1MDa LINE L1 3514 3652 -2888 2346 84 0 0 chr10 32766064 32766375 -107550390 + AluY SINE Alu 1 311 0 329 241 63 99 chr10 32766375 32766398 -107550367 + L1MDa LINE L1 3652 3674 -2866 1965 134 20 0 chr10 32766427 32766733 -107550032 + AluSx SINE Alu 1 312 0 345 325 30 53 chr10 32766966 32767135 -107549630 + L1MDa LINE L1 4117 4281 -2259 377 214 0 11 chr10 32767275 32767364 -107549401 - L1MB3 LINE L1 -86 6097 6010 2123 115 0 0 chr10 32767859 32768154 -107548611 + AluSx SINE Alu 1 295 -17 898 178 43 0 chr10 32768294 32768457 -107548308 + FAM SINE Alu 1 170 -5 1836 145 11 64 chr10 32769013 32769179 -107547586 - MER44D DNA MER2_type -1882 609 436 2032 112 11 0 chr10 32769179 32769466 -107547299 + AluSx SINE Alu 1 290 -22 1836 145 11 64 chr10 32769466 32769657 -107547108 - MER44D DNA MER2_type -2055 436 1 1558 118 169 0 chr10 32770389 32770644 -107546121 + AluSx SINE Alu 1 298 -4 1919 135 0 13 chr10 32770787 32771091 -107545674 - AluSx SINE Alu -12 300 1 268 350 29 58 chr10 32771159 32771433 -107545332 + L2 LINE L2 2596 2861 -453 245 330 119 9 chr10 32771502 32771611 -107545154 + L2 LINE L2 2948 3068 -204 2041 117 3 0 chr10 32771928 32772226 -107544539 - AluSx SINE Alu -13 299 1 256 236 92 90 chr10 32772307 32772686 -107544079 - L1ME4a LINE L1 -134 5987 5599 357 323 109 80 chr10 32772856 32772987 -107543778 + L3 LINE CR1 683 809 -768 1929 118 30 3 chr10 32772987 32773283 -107543482 + AluSx SINE Alu 1 304 -8 357 323 109 80 chr10 32773283 32773712 -107543053 + L3 LINE CR1 809 1259 -318 349 200 14 0 chr10 32774286 32774356 -107542409 + MLT1K LTR MaLR 518 588 0 350 296 244 24 chr10 32774416 32774629 -107542136 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32774776 32774832 -107541933 + MIR SINE MIR 2 61 -177 2229 93 3 0 chr10 32774832 32775132 -107541633 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32775132 32775270 -107541495 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32775580 32775711 -107541054 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32776502 32776524 -107540241 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32776795 32777097 -107539668 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32777239 32777423 -107539342 - MIR3 SINE MIR -30 178 37 414 270 99 52 chr10 32777629 32777786 -107538979 - MIR SINE MIR -29 233 62 2113 103 3 0 chr10 32777786 32778076 -107538689 + AluSx SINE Alu 1 291 -21 414 270 99 52 chr10 32778076 32778129 -107538636 - MIR SINE MIR -200 62 13 1939 143 3 0 chr10 32778359 32778659 -107538106 - AluSx SINE Alu -9 303 3 2480 134 55 0 chr10 32778790 32779194 -107537571 + MSTB LTR MaLR 1 426 0 300 241 226 0 chr10 32779482 32779615 -107537150 - L1ME LINE L1 -459 5662 5500 2563 130 21 3 chr10 32779650 32780035 -107536730 + MSTA LTR MaLR 16 407 -21 529 315 46 71 chr10 32780058 32780697 -107536068 - L1ME LINE L1 -737 5427 4807 187 330 82 46 chr10 32780738 32780932 -107535833 + L2 LINE L2 3025 3225 -47 449 132 105 26 chr10 32780987 32781101 -107535664 + MER53 DNA DNA 3 125 -64 2078 115 0 3 chr10 32781605 32781900 -107534865 - AluSx SINE Alu -18 294 1 462 309 237 10 chr10 32781973 32782556 -107534209 - L2 LINE L2 -28 3285 2553 490 254 18 0 chr10 32783196 32783310 -107533455 + MER5B DNA MER1_type 2 117 -61 1561 162 3 20 chr10 32783797 32784093 -107532672 + AluJo SINE Alu 1 291 -21 271 169 88 0 chr10 32784153 32784216 -107532549 + MIR SINE MIR 79 145 -63 2208 104 3 0 chr10 32786207 32786515 -107530250 + AluSg SINE Alu 1 309 -1 360 0 0 0 chr10 32786567 32786607 -107530158 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr10 32788760 32788789 -107527976 + AT_rich Low_complexity Low_complexity 1 29 0 348 302 151 44 chr10 32789830 32790055 -107526710 + L3 LINE CR1 1011 1259 -318 349 200 14 0 chr10 32790628 32790698 -107526067 + MLT1K LTR MaLR 518 588 0 314 285 248 33 chr10 32790758 32790972 -107525793 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32791118 32791174 -107525591 + MIR SINE MIR 2 61 -177 2249 90 3 0 chr10 32791174 32791474 -107525291 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32791474 32791612 -107525153 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32791922 32792053 -107524712 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32792844 32792866 -107523899 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32793137 32793439 -107523326 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32793582 32793766 -107522999 - MIR3 SINE MIR -30 178 37 390 273 106 0 chr10 32793972 32794104 -107522661 - MIR SINE MIR -29 233 88 2033 121 3 0 chr10 32794129 32794427 -107522338 + AluSx SINE Alu 1 299 -13 219 340 130 0 chr10 32794753 32794853 -107521912 - L2 LINE L2 -212 3060 2948 268 350 29 58 chr10 32794922 32795196 -107521569 - L2 LINE L2 -453 2861 2596 1919 135 0 13 chr10 32795264 32795568 -107521197 + AluSx SINE Alu 1 300 -12 1579 114 169 0 chr10 32795709 32795964 -107520801 - AluSx SINE Alu -4 298 1 207 88 29 0 chr10 32799554 32799588 -107517177 + (CCCCCA)n Simple_repeat Simple_repeat 6 40 0 899 169 7 0 chr10 32800735 32800889 -107515876 - 7SLRNA srpRNA srpRNA -71 249 95 328 293 165 0 chr10 32801627 32801760 -107515005 - MIR SINE MIR -6 256 102 209 32 0 32 chr10 32801818 32801849 -107514916 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1644 159 30 0 chr10 32801850 32801996 -107514769 - AluSx SINE Alu -32 280 121 513 0 0 0 chr10 32801996 32802053 -107514712 + (TG)n Simple_repeat Simple_repeat 1 57 0 1644 159 30 0 chr10 32802053 32802177 -107514588 - AluSx SINE Alu -191 121 2 238 342 7 0 chr10 32802951 32803103 -107513662 + CT-rich Low_complexity Low_complexity 1 153 0 225 0 0 0 chr10 32803332 32803357 -107513408 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 325 163 155 105 chr10 32804529 32804763 -107512002 - MIR SINE MIR -10 252 16 1732 168 27 7 chr10 32805827 32806119 -107510646 + AluSx SINE Alu 1 298 -14 1952 162 0 0 chr10 32807223 32807525 -107509240 + AluSx SINE Alu 1 302 -10 301 252 24 11 chr10 32808275 32808377 -107508388 - MIR SINE MIR -64 144 62 193 237 132 26 chr10 32808606 32808682 -107508083 - MIR SINE MIR -70 192 109 210 180 0 60 chr10 32809377 32809427 -107507338 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 2151 133 3 0 chr10 32809741 32810049 -107506716 + AluSx SINE Alu 1 309 -3 803 192 6 13 chr10 32810374 32810530 -107506235 + MER5A DNA MER1_type 2 156 -33 2405 100 3 0 chr10 32810880 32811189 -107505576 + AluSp SINE Alu 1 310 -3 1737 167 4 4 chr10 32811591 32811866 -107504899 + AluJo SINE Alu 1 275 -37 583 261 141 22 chr10 32811974 32812318 -107504447 + L1ME LINE L1 5317 5701 -458 23 33 0 0 chr10 32812673 32812703 -107504062 + AT_rich Low_complexity Low_complexity 1 30 0 788 195 39 19 chr10 32812757 32812973 -107503792 - L1MB7 LINE L1 -221 5963 5771 1580 157 86 4 chr10 32814214 32814494 -107502271 - AluJb SINE Alu -9 303 1 848 173 0 0 chr10 32814637 32814770 -107501995 + AluJ SINE Alu 1 133 -179 933 142 0 14 chr10 32815766 32815907 -107500858 + AluJ SINE Alu 118 256 -56 2164 110 0 13 chr10 32816440 32816740 -107500025 + AluJb SINE Alu 9 304 -8 280 285 26 33 chr10 32816769 32816920 -107499845 - L1ME4a LINE L1 -201 5920 5771 1749 157 47 30 chr10 32818630 32818929 -107497836 + AluJb SINE Alu 1 304 -8 1949 149 3 20 chr10 32819053 32819241 -107497524 - AluSx SINE Alu -15 297 114 3563 119 39 47 chr10 32819241 32819860 -107496905 - LTR18B LTR ERVL 0 614 1 1949 149 3 20 chr10 32819860 32819973 -107496792 - AluSx SINE Alu -198 114 1 273 161 0 54 chr10 32820066 32820122 -107496643 - L1ME4a LINE L1 -360 5761 5709 * 287 197 43 51 chr10 32820118 32820235 -107496530 + L1ME LINE L1 5711 5826 -295 201 250 56 83 chr10 32820382 32820490 -107496275 + MIR3 SINE MIR 55 159 -49 1059 98 0 0 chr10 32820498 32820630 -107496135 + AluY SINE Alu 1 132 -179 2379 58 0 27 chr10 32820634 32820929 -107495836 + AluY SINE Alu 1 287 -24 456 313 33 62 chr10 32822016 32822384 -107494381 - MLT1K LTR MaLR -6 582 226 1561 189 38 58 chr10 32822454 32822850 -107493915 - MLT1B LTR MaLR 0 390 3 480 18 0 0 chr10 32822945 32823002 -107493763 + (CA)n Simple_repeat Simple_repeat 2 58 0 3008 250 76 38 chr10 32823411 32824536 -107492229 + HAL1 LINE L1 1304 2471 -36 1074 116 104 93 chr10 32824637 32824730 -107492035 + L1MA9 LINE L1 6051 6141 -171 1766 120 42 39 chr10 32824730 32824974 -107491791 - L1MA5 LINE L1 -2 6298 6051 1816 185 0 3 chr10 32824974 32825272 -107491493 - AluJb SINE Alu -15 297 1 1766 120 42 39 chr10 32825272 32825360 -107491405 - L1MA5 LINE L1 -249 6051 5965 1074 116 104 93 chr10 32825360 32825389 -107491376 + L1MA9 LINE L1 6141 6168 -144 180 0 0 0 chr10 32825389 32825409 -107491356 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1074 116 104 93 chr10 32825409 32825544 -107491221 + L1MA9 LINE L1 6168 6312 0 1895 97 93 0 chr10 32825580 32825837 -107490928 + AluSx SINE Alu 1 281 -31 351 0 0 0 chr10 32825839 32825878 -107490887 + (CA)n Simple_repeat Simple_repeat 2 40 0 429 265 8 6 chr10 32825926 32826050 -107490715 - MIR3 SINE MIR -48 160 41 569 202 39 8 chr10 32827519 32827648 -107489117 + MER94 DNA DNA 2 134 0 215 214 0 0 chr10 32827663 32827705 -107489060 + CT-rich Low_complexity Low_complexity 2 43 0 2484 69 0 3 chr10 32827761 32828064 -107488701 + AluSg1 SINE Alu 1 302 -7 1439 208 68 17 chr10 32828878 32828897 -107487868 - L1ME3 LINE L1 0 6162 6145 947 182 80 144 chr10 32828897 32828980 -107487785 + MSTD LTR MaLR 1 88 -308 2030 85 22 15 chr10 32828980 32829252 -107487513 - AluSc SINE Alu -14 295 22 947 182 80 144 chr10 32829252 32829591 -107487174 + MSTD LTR MaLR 88 396 0 1439 208 68 17 chr10 32829591 32829922 -107486843 - L1ME3 LINE L1 -17 6145 5794 2259 98 37 0 chr10 32829938 32830233 -107486532 - AluSg SINE Alu -4 306 1 600 292 116 5 chr10 32830569 32830785 -107485980 - MIR SINE MIR -21 241 2 256 133 0 0 chr10 32831461 32831506 -107485259 - AluJ/FLAM SINE Alu -218 84 40 287 259 0 7 chr10 32831555 32831690 -107485075 + (CA)n Simple_repeat Simple_repeat 2 135 0 27 0 0 0 chr10 32831899 32831926 -107484839 + AT_rich Low_complexity Low_complexity 1 27 0 1336 239 65 75 chr10 32831929 32832439 -107484326 + MER77 LTR ERV1 54 558 -47 611 208 32 8 chr10 32833222 32833347 -107483418 + MLT1A2 LTR MaLR 1 128 -246 19221 138 17 14 chr10 32833347 32836317 -107480448 + L1M1 LINE L1 27 3004 -4561 960 204 71 31 chr10 32836317 32836542 -107480223 - MER77 LTR ERV1 -196 409 176 2041 119 10 7 chr10 32836557 32836852 -107479913 + AluSx SINE Alu 1 296 -16 643 182 0 33 chr10 32836855 32836976 -107479789 - MER77 LTR ERV1 -484 121 5 335 225 25 0 chr10 32836987 32837067 -107479698 + MER5B DNA MER1_type 24 105 -73 1934 142 14 96 chr10 32837278 32837632 -107479133 - L1MB8 LINE L1 -55 6123 5808 790 146 23 0 chr10 32837632 32837762 -107479003 - FLAM_C SINE Alu 0 133 1 1934 142 14 96 chr10 32837762 32837836 -107478929 - L1MB8 LINE L1 -370 5808 5730 612 249 5 29 chr10 32838469 32838678 -107478087 - L1M4 LINE L1 -1721 4425 4222 2400 60 0 11 chr10 32838684 32839000 -107477765 + AluY SINE Alu 1 313 0 1222 137 0 11 chr10 32839000 32839182 -107477583 + AluSg/x SINE Alu 127 306 -4 2092 131 51 26 chr10 32839197 32839549 -107477216 + THE1B LTR MaLR 1 361 -3 1944 208 59 2 chr10 32839549 32840002 -107476763 - L1M4 LINE L1 -1923 4223 3742 284 327 137 0 chr10 32840002 32840155 -107476610 + L2 LINE L2 2616 2789 -525 1429 149 0 0 chr10 32840167 32840375 -107476390 - AluJo SINE Alu -18 294 87 705 313 68 26 chr10 32840387 32840756 -107476009 + L2 LINE L2 2793 3145 -168 189 0 0 0 chr10 32840756 32840777 -107475988 + (TTA)n Simple_repeat Simple_repeat 3 23 0 7651 26 0 0 chr10 32840777 32841763 -107475002 - L1PA4 LINE L1 -18 6137 5152 705 313 68 26 chr10 32841763 32841788 -107474977 + L2 LINE L2 3144 3203 -110 1569 196 0 11 chr10 32841843 32842124 -107474641 + AluJb SINE Alu 7 284 -28 459 239 13 45 chr10 32842149 32842304 -107474461 - L2 LINE L2 -45 3268 3119 904 222 56 65 chr10 32842320 32842376 -107474389 + L1MA9 LINE L1 5981 6036 -276 2115 107 16 16 chr10 32842376 32842685 -107474080 + AluSx SINE Alu 1 309 -3 904 222 56 65 chr10 32842685 32842934 -107473831 + L1MA9 LINE L1 6036 6283 -29 927 97 8 0 chr10 32842988 32843112 -107473653 - AluJb SINE Alu -186 126 2 1332 96 0 27 chr10 32843138 32843326 -107473439 - LTR8 LTR ERV1 -100 591 409 578 286 197 13 chr10 32843326 32843641 -107473124 - L2 LINE L2 -1415 1899 1527 2233 90 41 0 chr10 32843911 32844201 -107472564 - AluSx SINE Alu -10 302 1 1158 122 12 0 chr10 32844262 32844426 -107472339 - AluSg/x SINE Alu -12 300 135 1785 163 3 3 chr10 32844430 32844718 -107472047 - AluJb SINE Alu -24 288 1 639 217 32 26 chr10 32844730 32844906 -107471859 + L1P4 LINE L1 5593 5771 -403 2073 146 0 0 chr10 32845082 32845383 -107471382 + AluSx SINE Alu 1 301 -11 2054 163 0 0 chr10 32845398 32845704 -107471061 + AluSx SINE Alu 1 306 -6 1043 177 0 11 chr10 32845733 32845908 -107470857 + AluJo SINE Alu 1 173 -139 1987 125 66 0 chr10 32846190 32846479 -107470286 - AluSq SINE Alu -5 308 1 541 186 88 0 chr10 32846534 32846647 -107470118 - MER65C LTR ERV1 0 461 339 * 779 190 35 7 chr10 32846643 32846785 -107469980 - MER65C LTR ERV1 -313 148 3 192 231 0 0 chr10 32847145 32847184 -107469581 + MIR SINE MIR 35 73 -135 1974 160 3 3 chr10 32847240 32847552 -107469213 - AluSx SINE Alu 0 312 1 2324 107 3 0 chr10 32848035 32848335 -107468430 + AluSx SINE Alu 1 301 -11 2281 118 3 0 chr10 32848399 32848704 -107468061 + AluSp SINE Alu 1 306 -7 263 248 220 0 chr10 32848976 32849085 -107467680 - MIR SINE MIR -82 180 48 429 284 116 16 chr10 32849125 32849315 -107467450 + L1ME LINE L1 5597 5805 -316 306 158 58 12 chr10 32849320 32849491 -107467274 + (TA)n Simple_repeat Simple_repeat 2 180 0 400 218 47 18 chr10 32849511 32849681 -107467084 + (TA)n Simple_repeat Simple_repeat 1 175 0 588 121 0 0 chr10 32849683 32849774 -107466991 + (CA)n Simple_repeat Simple_repeat 2 92 0 841 214 19 0 chr10 32849780 32849939 -107466826 - FAM SINE Alu -13 162 1 307 243 9 56 chr10 32849948 32850055 -107466710 - MIR SINE MIR -11 251 150 2204 118 0 13 chr10 32850107 32850411 -107466354 + AluSx SINE Alu 1 300 -12 308 281 41 97 chr10 32850631 32850827 -107465938 + MER5A DNA MER1_type 4 188 -1 1582 188 53 0 chr10 32850892 32851174 -107465591 - AluJo SINE Alu -10 302 6 236 54 54 0 chr10 32851217 32851254 -107465511 + T-rich Low_complexity Low_complexity 2 40 0 746 162 0 0 chr10 32851256 32851373 -107465392 - FLAM_C SINE Alu -15 118 2 1295 146 130 24 chr10 32851657 32851811 -107464954 - AluJo SINE Alu 0 301 165 207 0 0 0 chr10 32851811 32851834 -107464931 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1295 146 130 24 chr10 32851834 32851953 -107464812 - AluJo SINE Alu -136 165 1 2114 139 0 0 chr10 32852484 32852785 -107463980 + AluSx SINE Alu 1 301 -11 1164 74 23 0 chr10 32852807 32852983 -107463782 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2083 136 3 3 chr10 32852988 32853298 -107463467 + AluSx SINE Alu 2 311 -1 189 245 38 0 chr10 32853765 32853818 -107462947 - MIR SINE MIR -133 129 75 482 127 0 0 chr10 32854000 32854071 -107462694 - Alu SINE Alu -9 301 231 519 255 79 47 chr10 32854191 32854469 -107462296 + L2 LINE L2 3027 3313 0 262 325 61 31 chr10 32855240 32855403 -107461362 + MIR SINE MIR 30 197 -65 344 314 8 8 chr10 32855529 32855647 -107461118 - MIR SINE MIR -102 160 43 1764 103 0 56 chr10 32856072 32856209 -107460556 + AluSq SINE Alu 1 120 -193 2223 92 0 21 chr10 32856209 32856535 -107460230 + AluSg SINE Alu 3 322 0 1764 103 0 56 chr10 32856535 32856648 -107460117 + AluSq SINE Alu 120 238 -75 1289 171 30 34 chr10 32856680 32856944 -107459821 + AluJo SINE Alu 35 297 -15 1483 217 40 42 chr10 32857001 32857317 -107459448 + MER63B DNA MER1_type 1 317 -745 1790 153 0 0 chr10 32857317 32857585 -107459180 - AluJb SINE Alu -11 301 34 1483 217 40 42 chr10 32857585 32857669 -107459096 + MER63B DNA MER1_type 317 400 -36 365 248 72 20 chr10 32858373 32858526 -107458239 + MIR SINE MIR 102 262 0 2147 138 0 0 chr10 32858542 32858846 -107457919 - AluSq SINE Alu -7 306 3 700 181 8 15 chr10 32858948 32859081 -107457684 + FLAM_C SINE Alu 2 133 -10 1125 200 77 82 chr10 32859221 32859274 -107457491 + MLT1A1 LTR MaLR 1 53 -312 3843 111 57 23 chr10 32859274 32859394 -107457371 - MER41B LTR ERV1 0 635 521 2250 102 20 0 chr10 32859394 32859687 -107457078 + AluSx SINE Alu 1 299 -13 3843 111 57 23 chr10 32859687 32860180 -107456585 - MER41B LTR ERV1 -114 521 1 1125 200 77 82 chr10 32860180 32860491 -107456274 + MLT1A1 LTR MaLR 53 363 -2 2118 138 13 0 chr10 32860656 32860961 -107455804 - AluSx SINE Alu -3 309 1 1521 178 34 14 chr10 32860968 32861261 -107455504 - AluJb SINE Alu -13 299 1 21 0 0 0 chr10 32861312 32861333 -107455432 + AT_rich Low_complexity Low_complexity 1 21 0 2298 105 0 10 chr10 32861624 32861928 -107454837 + AluSx SINE Alu 1 301 -11 702 146 0 0 chr10 32863112 32863215 -107453550 - FRAM SINE Alu -11 165 63 3744 78 58 37 chr10 32863215 32863789 -107452976 - LTR61 LTR ERV1 -9 586 1 1073 132 15 71 chr10 32863790 32863987 -107452778 - AluJb SINE Alu -126 186 1 2183 133 0 0 chr10 32864012 32864320 -107452445 + AluSx SINE Alu 2 309 -3 2191 121 3 3 chr10 32864349 32864655 -107452110 - AluSp SINE Alu -7 306 1 1900 126 0 21 chr10 32865571 32865856 -107450909 + AluJb SINE Alu 6 284 -28 428 0 19 0 chr10 32865856 32865908 -107450857 + (CATA)n Simple_repeat Simple_repeat 2 54 0 26 0 0 0 chr10 32866874 32866900 -107449865 + AT_rich Low_complexity Low_complexity 1 26 0 2363 70 3 0 chr10 32866900 32867187 -107449578 + AluSp SINE Alu 1 288 -25 1989 113 13 10 chr10 32867187 32867489 -107449276 - AluJo SINE Alu -3 309 7 279 0 0 0 chr10 32867624 32867655 -107449110 + (GA)n Simple_repeat Simple_repeat 1 31 0 26 23 0 23 chr10 32870182 32870207 -107446558 + AT_rich Low_complexity Low_complexity 1 26 -17 2297 67 32 0 chr10 32870207 32870489 -107446276 - AluSq SINE Alu -22 291 1 26 23 0 23 chr10 32870489 32870507 -107446258 + AT_rich Low_complexity Low_complexity 26 43 0 249 237 17 0 chr10 32871233 32871292 -107445473 + U7 snRNA snRNA 3 62 -1 771 233 0 59 chr10 32871978 32872197 -107444568 - MIR SINE MIR -26 236 31 297 208 69 0 chr10 32873329 32873401 -107443364 + MIR3 SINE MIR 110 186 -22 2045 134 3 0 chr10 32874173 32874472 -107442293 + AluSx SINE Alu 1 300 -12 2374 100 0 0 chr10 32876270 32876569 -107440196 - AluSx SINE Alu -13 299 1 376 263 60 24 chr10 32877401 32877563 -107439202 - L2 LINE L2 -213 3059 2893 536 326 4 34 chr10 32877944 32878180 -107438585 - L3 LINE CR1 -1 1576 1348 546 294 87 5 chr10 32878237 32878455 -107438310 + MIR SINE MIR 13 248 -14 183 328 0 0 chr10 32878869 32878936 -107437829 + L3 LINE CR1 622 688 -889 1999 136 7 7 chr10 32879021 32879316 -107437449 + AluJb SINE Alu 2 296 -16 1649 83 5 0 chr10 32879370 32879574 -107437191 + AluSp SINE Alu 77 281 -32 207 88 0 0 chr10 32879576 32879610 -107437155 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 190 255 0 0 chr10 32879782 32879829 -107436936 + L3b LINE CR1 1186 1232 -351 504 232 144 10 chr10 32879970 32880164 -107436601 + MIR SINE MIR 31 250 -12 2238 96 0 43 chr10 32880226 32880550 -107436215 + AluSx SINE Alu 1 310 -2 204 267 59 50 chr10 32880810 32880911 -107435854 + L2 LINE L2 3169 3270 -2 761 168 0 0 chr10 32881188 32881301 -107435464 - FLAM_C SINE Alu -25 118 6 2200 125 3 0 chr10 32881366 32881669 -107435096 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr10 32881822 32881852 -107434913 + AT_rich Low_complexity Low_complexity 1 30 0 446 243 0 0 chr10 32881868 32881983 -107434782 - L1ME2 LINE L1 0 6164 6053 24 0 0 0 chr10 32881999 32882023 -107434742 + AT_rich Low_complexity Low_complexity 1 24 0 741 189 0 0 chr10 32882027 32882159 -107434606 - FLAM_C SINE Alu 0 133 2 223 329 24 0 chr10 32882231 32882316 -107434449 + L2 LINE L2 3209 3295 -18 2089 112 7 3 chr10 32883523 32883856 -107432909 - AluSx SINE Alu 0 312 1 1448 245 87 32 chr10 32883888 32884350 -107432415 + L1ME3A LINE L1 5556 6042 -128 1190 123 0 0 chr10 32884362 32884533 -107432232 - AluSg/x SINE Alu -5 307 137 327 257 44 0 chr10 32884549 32884662 -107432103 + L1ME3A LINE L1 6053 6170 0 1178 132 11 6 chr10 32884758 32884932 -107431833 - AluSx SINE Alu -137 175 1 2121 116 0 35 chr10 32885923 32886234 -107430531 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr10 32886718 32886748 -107430017 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 32887003 32887049 -107429716 - L2 LINE L2 -17 3255 3210 1678 159 45 24 chr10 32887175 32887311 -107429454 + AluJo SINE Alu 1 133 -179 2371 84 3 0 chr10 32887311 32887607 -107429158 + AluSp SINE Alu 1 297 -16 1678 159 45 24 chr10 32887607 32887759 -107429006 + AluJo SINE Alu 133 295 -17 1757 165 23 13 chr10 32887792 32888101 -107428664 - AluSx SINE Alu 0 312 1 413 280 100 7 chr10 32888156 32888306 -107428459 - MIR SINE MIR -51 211 48 28 48 0 0 chr10 32888347 32888389 -107428376 + AT_rich Low_complexity Low_complexity 1 42 0 616 173 0 72 chr10 32888871 32889010 -107427755 + FLAM_C SINE Alu 5 133 0 554 114 44 9 chr10 32889010 32889124 -107427641 + GA-rich Low_complexity Low_complexity 3 120 0 1096 147 13 100 chr10 32889462 32889693 -107427072 + AluJo SINE Alu 85 295 -17 688 122 2 4 chr10 32891289 32891422 -107425343 - L1MB1 LINE L1 -1 6167 6051 624 167 0 0 chr10 32891829 32891925 -107424840 - FLAM_C SINE Alu -21 122 27 2314 84 0 0 chr10 32891925 32892211 -107424554 + AluSg SINE Alu 10 295 -15 27 29 0 0 chr10 32892307 32892341 -107424424 + AT_rich Low_complexity Low_complexity 1 34 0 255 147 0 0 chr10 32892990 32893024 -107423741 + Alu SINE Alu 247 280 -21 186 43 0 0 chr10 32893024 32893047 -107423718 + (T)n Simple_repeat Simple_repeat 1 23 0 610 104 52 0 chr10 32893829 32893925 -107422840 - AluSg/x SINE Alu -6 304 204 1203 130 0 0 chr10 32893948 32894117 -107422648 - AluSc SINE Alu -20 289 121 1137 72 0 0 chr10 32894265 32894403 -107422362 - AluSq/x SINE Alu -175 138 1 2453 84 0 0 chr10 32894475 32894783 -107421982 - AluSg SINE Alu -2 308 1 187 273 18 0 chr10 32895172 32895227 -107421538 - MIR3 SINE MIR -28 180 125 554 157 56 46 chr10 32895350 32895458 -107421307 + AluJo/FLAM SINE Alu 2 110 -202 2596 50 0 0 chr10 32895458 32895755 -107421010 - AluSg SINE Alu -13 297 1 253 286 60 12 chr10 32895787 32895871 -107420894 + MLT1K LTR MaLR 311 398 -190 561 240 44 33 chr10 32896171 32896354 -107420411 - MLT1K LTR MaLR -5 583 399 1101 189 92 32 chr10 32896763 32897044 -107419721 - L1MC4 LINE L1 -2 8040 7743 257 264 66 0 chr10 32897117 32897208 -107419557 - L1MC4 LINE L1 -312 7730 7634 183 330 9 46 chr10 32897464 32897573 -107419192 - L2 LINE L2 -47 3225 3121 577 274 44 9 chr10 32898175 32898393 -107418372 + L1ME1 LINE L1 5931 6161 -5 634 168 63 0 chr10 32898425 32898568 -107418197 + L1MB5 LINE L1 5179 5330 -816 2281 166 77 0 chr10 32898577 32898992 -107417773 + L1MB5 LINE L1 5587 6033 -141 891 301 93 5 chr10 32899663 32900082 -107416683 - LTR16B LTR ERVL -4 460 5 2442 55 7 10 chr10 32901822 32902129 -107414636 + AluSp SINE Alu 1 306 -7 22 35 0 0 chr10 32905411 32905440 -107411325 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 32906141 32906162 -107410603 + AT_rich Low_complexity Low_complexity 1 21 0 1942 139 22 27 chr10 32906265 32906601 -107410164 - L1MC/D LINE L1 -703 5630 5295 2277 100 7 0 chr10 32906601 32906910 -107409855 - AluSq SINE Alu -2 311 1 1942 139 22 27 chr10 32906910 32906940 -107409825 - L1MC/D LINE L1 -1038 5295 5266 1501 161 7 4 chr10 32906964 32907243 -107409522 - L1MA7 LINE L1 -11 6280 6001 1652 101 65 0 chr10 32907243 32907519 -107409246 - L1PA13 LINE L1 -8 6155 5860 822 287 127 19 chr10 32907956 32908325 -107408440 + MLT1I LTR MaLR 1 409 0 847 190 83 5 chr10 32908540 32908745 -107408020 - L1MD2 LINE L1 -396 5963 5743 471 167 0 0 chr10 32908889 32908979 -107407786 + T-rich Low_complexity Low_complexity 1 90 0 275 279 58 0 chr10 32910262 32910348 -107406417 + L2 LINE L2 3161 3251 -21 4562 145 55 21 chr10 32920803 32921674 -107395091 + L1MA4 LINE L1 5395 6295 -5 2331 177 24 9 chr10 32921696 32922149 -107394616 + MER4D LTR ERV1 421 880 -23 29 70 0 0 chr10 32936188 32936245 -107380520 + AT_rich Low_complexity Low_complexity 1 57 0 282 290 7 76 chr10 32938157 32938302 -107378463 + MIR SINE MIR 10 144 -118 259 317 69 0 chr10 32939757 32939858 -107376907 + MIR SINE MIR 85 192 -70 665 267 19 6 chr10 32939984 32940145 -107376620 - MIR SINE MIR -75 187 25 332 218 103 0 chr10 32940473 32940560 -107376205 - L2 LINE L2 -2 3270 3175 299 53 0 0 chr10 32944751 32944789 -107371976 + (TA)n Simple_repeat Simple_repeat 2 39 0 2170 110 0 32 chr10 32944789 32945098 -107371667 - AluSg SINE Alu -11 299 1 1901 177 0 3 chr10 32945109 32945397 -107371368 - AluJo SINE Alu -25 287 1 292 358 8 30 chr10 32945404 32945538 -107371227 - MIR3 SINE MIR -67 141 11 1863 320 59 35 chr10 32949635 32950971 -107365794 + HERVL LTR ERVL 2832 4199 -1455 1506 54 19 0 chr10 32950977 32951182 -107365583 - MER11A LTR ERVK 0 1266 1058 1741 131 0 16 chr10 32952856 32953108 -107363657 - AluJb SINE Alu -64 248 1 23 22 0 44 chr10 32953111 32953130 -107363635 + AT_rich Low_complexity Low_complexity 1 19 -24 2121 141 0 0 chr10 32953130 32953436 -107363329 + AluSx SINE Alu 1 306 -6 23 22 0 44 chr10 32953436 32953461 -107363304 + AT_rich Low_complexity Low_complexity 19 43 0 282 248 118 20 chr10 32953500 32953653 -107363112 - L1 LINE L1 -2208 3938 3771 21 57 0 0 chr10 32953770 32953805 -107362960 + AT_rich Low_complexity Low_complexity 1 35 0 379 296 107 47 chr10 32953894 32954211 -107362554 - L1 LINE L1 -2701 3445 3110 3001 17 0 0 chr10 32957512 32958060 -107358705 + L1P1 LINE L1 5014 5561 -594 324 277 54 9 chr10 32961577 32961689 -107355076 - MIR SINE MIR -113 149 33 227 256 33 56 chr10 32961771 32961811 -107354954 + MIR SINE MIR 105 144 -118 2710 147 9 9 chr10 32961811 32962239 -107354526 - MSTC LTR MaLR 0 428 1 227 256 33 56 chr10 32962239 32962288 -107354477 + MIR SINE MIR 144 192 -70 1231 76 4 44 chr10 32971655 32971880 -107344885 + HERVK9 LTR ERVK 3725 3940 -1976 1873 132 3 12 chr10 32971881 32972207 -107344558 + HERVK9 LTR ERVK 4583 4905 -1011 2508 69 0 3 chr10 32972241 32972544 -107344221 + AluY SINE Alu 1 302 -9 2367 92 0 16 chr10 32972698 32973014 -107343751 + AluSq SINE Alu 1 311 -2 865 130 30 0 chr10 32973018 32973149 -107343616 + AluJo SINE Alu 1 135 -177 22 0 0 0 chr10 32973149 32973171 -107343594 + AT_rich Low_complexity Low_complexity 1 22 0 2786 142 17 4 chr10 32977004 32977482 -107339283 - MER41B LTR ERV1 0 635 152 1695 105 0 13 chr10 32977482 32977721 -107339044 - AluSq SINE Alu -7 306 71 323 182 18 0 chr10 32980662 32980717 -107336048 + AluJ/FLAM SINE Alu 10 65 -237 1654 109 102 82 chr10 32984945 32985248 -107331517 - AluSx SINE Alu -3 309 1 8854 64 9 0 chr10 32987806 32989016 -107327749 - L1P LINE L1 -1145 5001 3781 2180 111 3 0 chr10 32992571 32992868 -107323897 + AluSx SINE Alu 4 301 -11 27 0 0 0 chr10 32994712 32994739 -107322026 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 32998531 32998559 -107318206 + AT_rich Low_complexity Low_complexity 1 28 0 278 218 0 13 chr10 32998598 32998676 -107318089 - HAL1 LINE L1 -302 2205 2129 3303 19 0 0 chr10 32998736 32999114 -107317651 - L1PA2 LINE L1 -4 6151 5774 2242 101 3 3 chr10 32999188 32999485 -107317280 - AluSq SINE Alu -16 297 1 333 191 0 0 chr10 32999690 32999737 -107317028 + T-rich Low_complexity Low_complexity 1 47 0 627 330 67 28 chr10 32999837 33000164 -107316601 - L2 LINE L2 -941 2373 2034 2086 119 20 0 chr10 33004321 33004614 -107312151 + AluSx SINE Alu 1 299 -13 208 313 9 120 chr10 33004620 33004837 -107311928 - L2 LINE L2 -2760 554 362 1372 243 181 24 chr10 33007308 33007810 -107308955 - MER20B DNA MER1_type -182 601 21 675 270 35 11 chr10 33007854 33008028 -107308737 + MER45A DNA AcHobo 1 178 0 429 88 44 0 chr10 33013176 33013244 -107303521 - BC200 scRNA scRNA -128 72 2 250 305 80 7 chr10 33013279 33013430 -107303335 - Charlie7 DNA MER1_type -16 2596 2435 1981 160 22 8 chr10 33013881 33014237 -107302528 + L1MB8 LINE L1 5818 6178 0 298 315 151 20 chr10 33016195 33016341 -107300424 + MER5A DNA MER1_type 19 183 -6 711 214 60 45 chr10 33017818 33018019 -107298746 + MER3 DNA MER1_type 6 209 0 396 277 60 42 chr10 33018090 33018256 -107298509 - MIR SINE MIR -92 170 2 197 326 146 0 chr10 33022423 33022512 -107294253 + MIR SINE MIR 29 130 -78 236 526 0 0 chr10 33024006 33024082 -107292683 + T-rich Low_complexity Low_complexity 1 76 0 259 293 123 0 chr10 33024531 33024637 -107292128 - L2 LINE L2 -1 3271 3153 23 0 0 0 chr10 33024881 33024904 -107291861 + AT_rich Low_complexity Low_complexity 1 23 0 2738 66 11 0 chr10 33024913 33025292 -107291473 + L1PA6 LINE L1 5801 6154 0 21 0 0 0 chr10 33032137 33032158 -107284607 + GC_rich Low_complexity Low_complexity 1 21 0 274 263 18 47 chr10 33032344 33032515 -107284250 + G-rich Low_complexity Low_complexity 4 169 0 2288 99 0 3 chr10 33039189 33039491 -107277274 - AluY SINE Alu -10 301 1 2153 130 3 0 chr10 33039499 33039791 -107276974 - AluSg SINE Alu -17 293 1 2325 97 10 0 chr10 33039799 33040097 -107276668 - AluSq SINE Alu -7 306 6 1619 182 27 30 chr10 33040125 33040422 -107276343 - AluJo SINE Alu -15 297 2 189 0 0 0 chr10 33040435 33040456 -107276309 + (TTAAA)n Simple_repeat Simple_repeat 4 24 0 388 328 54 24 chr10 33041225 33041526 -107275239 - LTR33 LTR ERVL -9 512 158 1937 148 7 10 chr10 33041526 33041829 -107274936 + AluJb SINE Alu 6 307 -5 388 328 54 24 chr10 33041829 33041973 -107274792 - LTR33 LTR ERVL -363 158 20 227 280 68 15 chr10 33042022 33042154 -107274611 - L2 LINE L2 -239 3033 2895 2192 106 0 0 chr10 33042355 33042670 -107274095 - AluSx SINE Alu 0 315 1 239 179 75 0 chr10 33042670 33042737 -107274028 + MER97c DNA MER1_type? 225 296 -794 794 203 27 0 chr10 33042745 33042893 -107273872 - FRAM SINE Alu -23 153 2 1208 208 148 48 chr10 33042893 33043354 -107273411 + MER97b DNA MER1_type? 278 784 -269 180 0 0 0 chr10 33043365 33043385 -107273380 + (TG)n Simple_repeat Simple_repeat 1 20 0 2067 134 10 0 chr10 33043472 33043770 -107272995 + AluSx SINE Alu 7 307 -5 280 83 0 0 chr10 33043770 33043806 -107272959 + (GA)n Simple_repeat Simple_repeat 1 36 0 838 107 21 0 chr10 33043810 33043950 -107272815 + (GGAA)n Simple_repeat Simple_repeat 3 145 0 1972 134 7 0 chr10 33043993 33044270 -107272495 + AluSx SINE Alu 1 279 -33 1869 176 97 32 chr10 33044289 33044720 -107272045 + LTR2B LTR ERV1 32 490 0 2602 88 34 26 chr10 33044720 33045104 -107271661 + Harlequin LTR ERV1 1 387 -6509 2390 67 60 0 chr10 33045097 33045428 -107271337 + Harlequin LTR ERV1 263 613 -6283 * 2400 54 6 13 chr10 33045408 33045723 -107271042 + Harlequin LTR ERV1 1408 1720 -5176 254 263 200 0 chr10 33045725 33045805 -107270960 - LTR8 LTR ERV1 -438 253 158 830 76 0 23 chr10 33045811 33045943 -107270822 + Harlequin LTR ERV1 1807 1935 -4961 32298 60 2 18 chr10 33046043 33050154 -107266611 + Harlequin LTR ERV1 1913 5961 -935 640 100 36 45 chr10 33050152 33050262 -107266503 + Harlequin LTR ERV1 6788 6896 0 * 2171 162 89 33 chr10 33050263 33050721 -107266044 + LTR2B LTR ERV1 7 490 0 529 118 0 0 chr10 33050829 33050905 -107265860 + LTR2B LTR ERV1 415 490 0 1806 159 48 0 chr10 33051026 33051321 -107265444 - AluSx SINE Alu -1 311 3 3582 128 2 13 chr10 33051829 33052362 -107264403 + MER1A DNA MER1_type 1 527 0 2152 113 0 0 chr10 33052589 33052871 -107263894 - AluSx SINE Alu -17 295 14 229 26 26 26 chr10 33053106 33053145 -107263620 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 472 135 10 58 chr10 33053165 33053269 -107263496 + AluJb SINE Alu 213 311 -1 2039 124 16 19 chr10 33053482 33053789 -107262976 - AluSq SINE Alu -7 306 1 21 0 0 0 chr10 33054080 33054101 -107262664 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 33054311 33054350 -107262415 + AT_rich Low_complexity Low_complexity 1 39 0 759 167 0 8 chr10 33054350 33054470 -107262295 - FLAM_C SINE Alu -13 120 2 208 247 12 12 chr10 33054523 33054604 -107262161 + (TA)n Simple_repeat Simple_repeat 1 81 0 2193 116 31 0 chr10 33054642 33054935 -107261830 + AluSx SINE Alu 1 302 -10 761 209 35 54 chr10 33054940 33055199 -107261566 + MER97c DNA MER1_type? 837 1090 0 2399 101 3 0 chr10 33055395 33055701 -107261064 - AluSp SINE Alu -6 307 1 1968 156 0 0 chr10 33055703 33056061 -107260704 - AluSx SINE Alu 0 312 1 659 183 38 23 chr10 33056061 33056192 -107260573 - AluJo/FLAM SINE Alu -169 133 1 1851 172 10 0 chr10 33057219 33057516 -107259249 + AluJb SINE Alu 1 300 -12 305 261 52 35 chr10 33057855 33057970 -107258795 + L2 LINE L2 2937 3053 -219 806 181 0 0 chr10 33058162 33058289 -107258476 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr10 33058435 33058463 -107258302 + AT_rich Low_complexity Low_complexity 1 28 0 730 148 99 77 chr10 33058465 33058647 -107258118 - AluJo SINE Alu -5 307 122 1925 119 7 0 chr10 33059108 33059394 -107257371 + AluSx SINE Alu 14 301 -11 252 77 0 0 chr10 33060579 33060618 -107256147 + (CA)n Simple_repeat Simple_repeat 2 40 0 1082 182 5 14 chr10 33060828 33061042 -107255723 + AluJo SINE Alu 87 298 -14 2039 111 0 19 chr10 33061064 33061371 -107255394 + AluSg SINE Alu 1 301 -9 597 195 55 8 chr10 33062136 33062264 -107254501 - MER94 DNA DNA 0 134 1 222 355 124 0 chr10 33062804 33062925 -107253840 + L2 LINE L2 3137 3272 0 931 184 12 0 chr10 33063288 33063451 -107253314 + FRAM SINE Alu 1 165 -11 1374 121 0 0 chr10 33063465 33063663 -107253102 + AluSg SINE Alu 1 198 -112 614 136 0 0 chr10 33063663 33063751 -107253014 - AluS SINE Alu -224 89 2 1906 100 50 4 chr10 33064329 33064609 -107252156 - AluSg SINE Alu -17 293 1 1125 153 1 28 chr10 33065145 33065454 -107251311 + MLT1A1 LTR MaLR 1 365 0 2108 116 3 0 chr10 33065730 33066031 -107250734 + AluSx SINE Alu 1 302 -10 202 374 18 25 chr10 33066509 33066672 -107250093 - MIR3 SINE MIR -7 201 40 794 188 0 0 chr10 33066696 33066829 -107249936 - FLAM_C SINE Alu 0 133 1 234 309 222 8 chr10 33067238 33067364 -107249401 + MIR SINE MIR 2 154 -108 2425 92 0 0 chr10 33067372 33067697 -107249068 + L1PB2 LINE L1 5542 5866 -285 264 91 0 0 chr10 33067697 33067759 -107249006 - Alu SINE Alu 0 314 253 234 0 0 0 chr10 33067821 33067847 -107248918 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 655 188 7 29 chr10 33068048 33068366 -107248399 + GA-rich Low_complexity Low_complexity 1 310 0 598 134 6 52 chr10 33068371 33068543 -107248222 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 319 260 19 29 chr10 33068778 33068882 -107247883 - MER112 DNA MER1_type -6 254 152 385 212 71 18 chr10 33068892 33069005 -107247760 + MER91C DNA MER1_type 1 119 -21 235 167 20 187 chr10 33069028 33069178 -107247587 - MER112 DNA MER1_type -134 126 2 341 266 11 11 chr10 33069600 33069694 -107247071 + LTR67 LTR ERVL 457 550 -7 773 131 8 8 chr10 33069971 33070093 -107246672 - AluJ SINE Alu -9 303 182 * 804 165 15 0 chr10 33070091 33070224 -107246541 - AluJ SINE Alu -177 135 1 189 243 100 29 chr10 33071421 33071491 -107245274 + L2 LINE L2 2199 2273 -1041 694 244 42 67 chr10 33071510 33071609 -107245156 - L1PB4 LINE L1 0 6156 6056 2362 72 0 0 chr10 33071609 33071902 -107244863 - AluSg SINE Alu -17 293 1 694 244 42 67 chr10 33071902 33072040 -107244725 - L1PB4 LINE L1 -100 6056 5925 303 271 97 85 chr10 33072216 33072463 -107244302 + L2 LINE L2 2641 2890 -424 721 243 49 52 chr10 33072531 33072819 -107243946 - HAL1 LINE L1 -36 2471 2185 1918 135 0 22 chr10 33072861 33073179 -107243586 + AluJo SINE Alu 1 311 -1 297 252 126 0 chr10 33073190 33073293 -107243472 - HAL1 LINE L1 -321 2186 2071 664 144 0 0 chr10 33073314 33073411 -107243354 + FLAM_A SINE Alu 30 126 -16 2180 110 0 0 chr10 33073413 33073705 -107243060 + AluSx SINE Alu 1 292 -20 232 348 54 0 chr10 33074187 33074299 -107242466 + MIR SINE MIR 128 245 -17 841 254 82 5 chr10 33074329 33074549 -107242216 + MIR SINE MIR 23 259 -3 1534 174 54 3 chr10 33074549 33074843 -107241922 + AluJb SINE Alu 2 310 -2 207 0 0 0 chr10 33075259 33075282 -107241483 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1972 103 59 0 chr10 33075734 33076024 -107240741 - AluSx SINE Alu -5 307 1 1727 157 7 3 chr10 33076040 33076357 -107240408 - AluJo SINE Alu 0 318 1 1075 114 0 40 chr10 33076508 33076683 -107240082 + AluSg/x SINE Alu 135 302 -8 2152 118 0 0 chr10 33077183 33077489 -107239276 - AluSx SINE Alu -6 306 1 286 284 0 0 chr10 33078083 33078150 -107238615 + MIR SINE MIR 36 102 -160 1934 121 9 35 chr10 33078257 33078572 -107238193 + AluSx SINE Alu 3 309 -3 530 244 28 50 chr10 33078579 33078759 -107238006 + L1MC5 LINE L1 7733 7908 -53 212 167 0 0 chr10 33078871 33078913 -107237852 + T-rich Low_complexity Low_complexity 1 42 0 287 353 0 8 chr10 33079498 33079631 -107237134 - MER117 DNA MER1_type -65 132 1 215 227 52 103 chr10 33079643 33079740 -107237025 - MIR SINE MIR -122 140 49 722 222 0 0 chr10 33079997 33080123 -107236642 - FLAM_C SINE Alu -16 127 2 2068 144 0 3 chr10 33080158 33080471 -107236294 - AluSx SINE Alu 0 312 1 180 176 0 0 chr10 33080532 33080566 -107236199 + CT-rich Low_complexity Low_complexity 2 35 0 1785 139 43 0 chr10 33080583 33080864 -107235901 + AluJb SINE Alu 1 293 -19 341 231 144 70 chr10 33081007 33081236 -107235529 + L2 LINE L2 2917 3162 -110 2160 86 0 0 chr10 33081256 33081534 -107235231 + AluSx SINE Alu 22 299 -13 881 203 27 0 chr10 33081600 33081748 -107235017 - AluJo/FRAM SINE Alu -14 288 137 1387 118 0 45 chr10 33081748 33081969 -107234796 - AluSq SINE Alu -102 211 1 829 168 0 0 chr10 33081983 33082108 -107234657 - FLAM_C SINE Alu -8 125 1 575 304 64 48 chr10 33082144 33082331 -107234434 - L1M4 LINE L1 -1672 4474 4279 1923 135 20 0 chr10 33082331 33082627 -107234138 + AluJb SINE Alu 1 302 -10 575 304 64 48 chr10 33082627 33082751 -107234014 - L1M4 LINE L1 -1867 4279 4158 25 31 0 0 chr10 33082757 33082789 -107233976 + AT_rich Low_complexity Low_complexity 1 32 0 1501 161 4 8 chr10 33082796 33083056 -107233709 - AluJb SINE Alu -49 263 5 251 352 48 14 chr10 33083063 33083208 -107233557 - L1M4 LINE L1 -1963 4183 4034 562 299 112 20 chr10 33083539 33083843 -107232922 + ERVL LTR ERVL 1051 1382 -3614 287 307 111 26 chr10 33083963 33084116 -107232649 + ERVL LTR ERVL 1585 1750 -3246 22 0 0 0 chr10 33084124 33084146 -107232619 + AT_rich Low_complexity Low_complexity 1 22 0 685 191 0 0 chr10 33084146 33084261 -107232504 - FLAM_A SINE Alu -18 115 1 294 328 96 28 chr10 33084270 33084447 -107232318 + ERVL LTR ERVL 1769 1957 -3697 352 307 41 66 chr10 33084521 33084606 -107232159 + ERVL LTR ERVL 3895 3981 -1673 2069 116 3 7 chr10 33084606 33084908 -107231857 - AluSx SINE Alu -11 301 1 352 307 41 66 chr10 33084908 33085086 -107231679 + ERVL LTR ERVL 3981 4161 -1493 606 316 18 0 chr10 33085098 33085269 -107231496 + ERVL LTR ERVL 2096 2269 -3495 688 329 17 8 chr10 33085298 33085535 -107231230 + ERVL LTR ERVL 2345 2583 -3181 255 355 0 7 chr10 33086102 33086254 -107230511 + (CCA)n Simple_repeat Simple_repeat 2 152 0 1888 158 0 3 chr10 33086366 33086664 -107230101 - AluSx SINE Alu -15 297 1 1349 196 4 8 chr10 33087339 33087604 -107229161 + L1MB3 LINE L1 4700 4963 -1183 3115 132 327 32 chr10 33087606 33088324 -107228441 - MER21A LTR ERV1 -1 930 1 367 157 56 74 chr10 33088324 33088369 -107228396 + L1MB3 LINE L1 4960 5004 -1142 2040 121 0 7 chr10 33088369 33088674 -107228091 + AluSq SINE Alu 1 303 -10 367 157 56 74 chr10 33088674 33088736 -107228029 + L1MB3 LINE L1 5004 5065 -1081 4747 143 13 36 chr10 33088753 33089219 -107227546 + L1MB3 LINE L1 5304 5742 -441 2026 126 0 16 chr10 33089219 33089393 -107227372 - AluSg SINE Alu -5 305 137 2066 82 7 7 chr10 33089393 33089686 -107227079 - AluY SINE Alu -18 293 1 2026 126 0 16 chr10 33089686 33089821 -107226944 - AluSg SINE Alu -173 137 1 4747 143 13 36 chr10 33089821 33090205 -107226560 + L1MB3 LINE L1 5742 6134 -49 650 140 0 0 chr10 33090205 33090298 -107226467 - FRAM SINE Alu -28 148 56 6163 107 164 16 chr10 33090437 33091501 -107225264 + MER11B LTR ERVK 1 1222 -14 2138 112 0 0 chr10 33091506 33091802 -107224963 - AluSx SINE Alu -16 296 1 535 139 0 0 chr10 33091983 33092062 -107224703 - AluSx SINE Alu -12 297 219 1195 85 0 0 chr10 33092079 33092232 -107224533 - AluSx SINE Alu -159 153 1 2038 106 0 3 chr10 33092288 33092616 -107224149 + AluSc SINE Alu 1 327 0 494 222 24 16 chr10 33092936 33093062 -107223703 + AluSq/x SINE Alu 19 145 -168 598 202 0 8 chr10 33093064 33093188 -107223577 + AluY SINE Alu 189 311 0 1009 141 0 33 chr10 33093188 33093372 -107223393 + AluSg/x SINE Alu 119 296 -14 208 143 0 0 chr10 33093580 33093615 -107223150 + (T)n Simple_repeat Simple_repeat 1 35 0 303 323 133 31 chr10 33093813 33094008 -107222757 - MIR SINE MIR 0 262 48 2101 105 0 3 chr10 33094345 33094640 -107222125 + AluSx SINE Alu 1 294 -18 256 230 95 40 chr10 33094767 33094841 -107221924 + MER45C DNA AcHobo 1 78 -875 850 207 21 21 chr10 33094909 33095102 -107221663 - AluJb SINE Alu -3 309 117 328 274 177 18 chr10 33095102 33095215 -107221550 + MER45C DNA AcHobo 141 271 -682 2063 134 0 0 chr10 33095299 33095620 -107221145 + AluSx SINE Alu 1 312 0 427 212 121 10 chr10 33095717 33095816 -107220949 + L2 LINE L2 3204 3313 0 2179 125 0 0 chr10 33095997 33096300 -107220465 - AluSx SINE Alu -9 303 1 2339 97 3 0 chr10 33096301 33096621 -107220144 - L1PA13 LINE L1 -467 5696 5376 3553 73 11 0 chr10 33096621 33097078 -107219687 + L1PA13 LINE L1 5692 6163 0 255 305 35 64 chr10 33097756 33097897 -107218868 + L3b LINE CR1 1230 1366 -217 26 0 0 0 chr10 33097908 33097934 -107218831 + AT_rich Low_complexity Low_complexity 1 26 0 1224 176 38 109 chr10 33097949 33098262 -107218503 - AluJo SINE Alu -21 291 1 224 312 43 11 chr10 33098364 33098457 -107218308 - L2 LINE L2 -4 3309 3214 236 277 67 25 chr10 33098577 33098696 -107218069 + L1MEd LINE L1 3 126 -5993 207 0 0 0 chr10 33099025 33099048 -107217717 + (CA)n Simple_repeat Simple_repeat 2 24 0 1341 128 5 0 chr10 33099118 33099321 -107217444 + AluSq SINE Alu 103 306 -7 312 254 89 83 chr10 33099435 33099604 -107217161 + L1MEd LINE L1 523 692 -5427 2134 104 0 3 chr10 33099604 33099901 -107216864 + AluSc SINE Alu 1 296 -13 386 245 96 59 chr10 33099924 33100246 -107216519 + L1MEd LINE L1 873 1206 -4913 1605 175 28 0 chr10 33100248 33100534 -107216231 + AluJb SINE Alu 1 294 -18 1346 157 0 0 chr10 33100534 33100750 -107216015 + AluSp SINE Alu 2 217 -96 2037 112 7 3 chr10 33100823 33101119 -107215646 + AluSq SINE Alu 1 297 -16 260 305 8 39 chr10 33101137 33101265 -107215500 + HAL1 LINE L1 1449 1572 -935 2107 89 0 26 chr10 33101497 33101799 -107214966 - AluSq SINE Alu -19 294 1 2140 112 0 0 chr10 33101800 33102094 -107214671 - AluSx SINE Alu -18 294 1 372 225 25 0 chr10 33103074 33103154 -107213611 - MER5B DNA MER1_type -73 105 24 655 192 0 32 chr10 33103161 33103286 -107213479 + MER77 LTR ERV1 1 121 -484 2031 112 3 0 chr10 33103289 33103584 -107213181 - AluSx SINE Alu -16 296 1 21 0 0 0 chr10 33103681 33103702 -107213063 + AT_rich Low_complexity Low_complexity 1 21 0 1971 136 0 3 chr10 33104570 33104871 -107211894 - AluSx SINE Alu -12 300 1 763 193 0 36 chr10 33104957 33105123 -107211642 - AluJb SINE Alu -9 303 144 1564 118 169 0 chr10 33105595 33105850 -107210915 + AluSx SINE Alu 1 298 -4 1904 138 0 13 chr10 33105993 33106297 -107210468 - AluSx SINE Alu -12 300 1 284 355 28 57 chr10 33106365 33106647 -107210118 + L2 LINE L2 2596 2869 -445 227 339 119 9 chr10 33106708 33106817 -107209948 + L2 LINE L2 2948 3068 -204 1831 53 4 4 chr10 33107134 33107362 -107209403 - AluSg/x SINE Alu -13 299 72 1894 132 7 7 chr10 33107412 33107707 -107209058 - AluJb SINE Alu -16 296 2 208 328 0 0 chr10 33107792 33107859 -107208906 - L3 LINE CR1 -889 688 622 * 233 362 102 39 chr10 33107850 33108231 -107208534 + L3 LINE CR1 880 1284 -293 2413 77 3 3 chr10 33108766 33109065 -107207700 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 33109549 33109579 -107207186 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 33109834 33109880 -107206885 - L2 LINE L2 -17 3255 3210 820 164 0 0 chr10 33110006 33110134 -107206631 + FLAM_C SINE Alu 1 128 -5 2196 116 0 3 chr10 33110142 33110435 -107206330 + AluSx SINE Alu 1 292 -20 991 152 13 118 chr10 33111416 33111653 -107205112 + AluJo SINE Alu 85 296 -16 688 122 2 4 chr10 33113249 33113382 -107203383 - L1MB1 LINE L1 -1 6167 6051 629 154 0 132 chr10 33113790 33113886 -107202879 - FLAM_C SINE Alu -190 122 48 2291 91 0 0 chr10 33113886 33114171 -107202594 + AluSg SINE Alu 10 294 -16 629 154 0 132 chr10 33114171 33114210 -107202555 - FLAM_C SINE Alu -264 48 5 973 172 197 5 chr10 33114776 33114979 -107201786 - AluSq SINE Alu -71 242 1 1862 173 0 10 chr10 33115866 33116172 -107200593 + AluJo SINE Alu 1 303 -9 2319 106 0 0 chr10 33116915 33117216 -107199549 - AluSx SINE Alu -11 301 1 1651 173 0 22 chr10 33119129 33119407 -107197358 + AluJb SINE Alu 21 292 -20 377 277 7 36 chr10 33119696 33119833 -107196932 - MIR SINE MIR -109 153 21 602 143 76 0 chr10 33119912 33120017 -107196748 + MER69A DNA AcHobo 1 113 -64 1009 176 98 25 chr10 33120017 33120163 -107196602 - L1PB3 LINE L1 -7 6147 5980 2232 112 0 20 chr10 33120163 33120468 -107196297 - AluSx SINE Alu -13 299 1 1009 176 98 25 chr10 33120468 33120525 -107196240 - L1PB3 LINE L1 -174 5980 5929 1735 105 0 0 chr10 33120685 33120913 -107195852 - AluSg/x SINE Alu 0 310 83 1282 178 23 0 chr10 33121259 33121478 -107195287 + AluJo SINE Alu 86 309 -3 2185 103 0 13 chr10 33122456 33122757 -107194008 + AluSq SINE Alu 2 298 -15 3185 166 23 27 chr10 33122870 33123527 -107193238 - L1 LINE L1 -1280 4866 4213 1795 161 13 13 chr10 33124513 33124818 -107191947 + AluJo SINE Alu 1 305 -7 1819 110 100 4 chr10 33125460 33125741 -107191024 - AluSq SINE Alu -5 308 1 2314 113 0 0 chr10 33125821 33126122 -107190643 - AluSx SINE Alu -11 301 1 1647 168 20 37 chr10 33126125 33126312 -107190453 - AluJo SINE Alu -20 292 110 2269 121 0 0 chr10 33126312 33126609 -107190156 + AluSg SINE Alu 1 297 -13 1647 168 20 37 chr10 33126609 33126718 -107190047 - AluJo SINE Alu -202 110 1 187 273 18 0 chr10 33126840 33126895 -107189870 + MIR3 SINE MIR 125 180 -28 2392 91 3 0 chr10 33127284 33127591 -107189174 + AluSg SINE Alu 1 308 -2 2027 129 0 0 chr10 33127746 33128018 -107188747 + AluSx SINE Alu 1 272 -40 1419 197 41 55 chr10 33128119 33128485 -107188280 + MLT1B LTR MaLR 30 390 0 456 313 33 62 chr10 33128555 33128923 -107187842 + MLT1K LTR MaLR 226 582 -6 2265 74 0 21 chr10 33130010 33130293 -107186472 - AluSg SINE Alu -24 286 10 624 167 0 0 chr10 33130293 33130389 -107186376 + FLAM_C SINE Alu 27 122 -21 2256 120 0 7 chr10 33136211 33136519 -107180246 - AluSx SINE Alu -6 306 1 1707 85 162 4 chr10 33136719 33136978 -107179787 + AluSg SINE Alu 1 300 0 436 266 5 43 chr10 33136988 33137172 -107179593 + AluSg/x SINE Alu 121 297 -15 1437 153 9 123 chr10 33138014 33138354 -107178411 + AluJo SINE Alu 2 302 0 2298 105 3 3 chr10 33138528 33138834 -107177931 - AluSx SINE Alu -6 306 1 260 86 0 0 chr10 33139247 33139282 -107177483 - U2 snRNA snRNA -153 35 1 487 170 75 21 chr10 33139359 33139453 -107177312 + MER50 LTR ERV1 1 99 -635 973 122 0 7 chr10 33139453 33139621 -107177144 - AluSg/x SINE Alu 0 303 137 2279 85 3 31 chr10 33139621 33139939 -107176826 - AluSp SINE Alu -4 309 1 3769 131 45 3 chr10 33139941 33140536 -107176229 + MER50 LTR ERV1 92 711 -23 284 218 0 0 chr10 33140602 33140657 -107176108 - L1MC5 LINE L1 -90 7871 7817 514 263 56 33 chr10 33140665 33140878 -107175887 - L1ME3A LINE L1 -5 6165 5948 51 42 0 0 chr10 33140982 33141054 -107175711 + AT_rich Low_complexity Low_complexity 1 72 0 1436 145 0 9 chr10 33141061 33141282 -107175483 + AluJo SINE Alu 71 289 -23 183 42 0 0 chr10 33141452 33141476 -107175289 + (T)n Simple_repeat Simple_repeat 1 24 0 226 258 0 0 chr10 33141806 33141868 -107174897 + L2 LINE L2 2990 3051 -221 2183 112 0 0 chr10 33141973 33142259 -107174506 - AluSx SINE Alu -26 286 1 203 333 0 0 chr10 33142314 33142383 -107174382 + L2 LINE L2 3242 3310 -3 2167 125 3 28 chr10 33142469 33142789 -107173976 - AluSx SINE Alu 0 312 1 24 32 0 0 chr10 33142984 33143015 -107173750 + AT_rich Low_complexity Low_complexity 1 31 0 2085 131 20 0 chr10 33143103 33143463 -107173302 + AluSx SINE Alu 1 312 0 345 240 162 48 chr10 33143849 33144039 -107172726 - MLT1H LTR MaLR 0 549 345 1374 148 8 30 chr10 33144043 33144108 -107172657 + AluSg/x SINE Alu 72 137 -175 2139 116 3 0 chr10 33144108 33144418 -107172347 + AluSq SINE Alu 2 312 0 1374 148 8 30 chr10 33144418 33144588 -107172177 + AluSg/x SINE Alu 137 303 -9 235 182 0 0 chr10 33144588 33144632 -107172133 + L1MC3 LINE L1 7144 7187 -598 1770 188 22 6 chr10 33144697 33145021 -107171744 + L1MC3 LINE L1 7187 7515 -270 568 126 42 11 chr10 33145024 33145119 -107171646 + AluJ/FLAM SINE Alu 2 99 -213 1412 178 119 7 chr10 33145186 33145455 -107171310 + AluJo SINE Alu 1 299 -13 973 174 6 0 chr10 33145456 33145623 -107171142 + L1MC3 LINE L1 7510 7677 -108 1867 149 7 3 chr10 33145872 33146154 -107170611 - AluJb SINE Alu -29 283 1 937 127 35 12 chr10 33146304 33146477 -107170288 - Charlie3 DNA MER1_type -18 2692 2516 209 213 49 0 chr10 33146529 33146590 -107170175 + (TA)n Simple_repeat Simple_repeat 1 64 0 2592 128 50 26 chr10 33146599 33146716 -107170049 - MER1A DNA MER1_type -2269 433 320 2902 149 68 52 chr10 33146716 33147189 -107169576 + LTR9 LTR ERV1 1 488 -124 2343 108 0 0 chr10 33147189 33147495 -107169270 - AluSx SINE Alu -6 306 1 2902 149 68 52 chr10 33147495 33147623 -107169142 + LTR9 LTR ERV1 488 612 0 2592 128 50 26 chr10 33147623 33147928 -107168837 - MER1A DNA MER1_type -2382 320 1 1312 158 83 142 chr10 33148042 33148536 -107168229 + MER4C LTR ERV1 1 465 0 24 0 0 0 chr10 33149408 33149432 -107167333 + AT_rich Low_complexity Low_complexity 1 24 0 195 42 0 0 chr10 33149441 33149465 -107167300 + (TTA)n Simple_repeat Simple_repeat 1 24 0 826 138 0 46 chr10 33149465 33149595 -107167170 - FLAM_C SINE Alu -19 124 1 2085 130 3 0 chr10 33149599 33149891 -107166874 - AluSq SINE Alu -20 293 1 226 229 48 57 chr10 33149992 33150097 -107166668 - HAL1b LINE L1 -12 1336 1233 1917 163 0 13 chr10 33150177 33150483 -107166282 - 7SLRNA srpRNA srpRNA -14 306 5 346 176 0 0 chr10 33150483 33150534 -107166231 - FRAM/FAM SINE Alu -117 49 1 2199 117 10 0 chr10 33151054 33151344 -107165421 - AluSx SINE Alu -19 293 1 758 181 0 0 chr10 33151502 33151629 -107165136 + FLAM_A SINE Alu 1 127 -6 367 285 8 16 chr10 33151734 33151880 -107164885 + FRAM SINE Alu 25 153 -13 2136 106 51 0 chr10 33152052 33152344 -107164421 - AluSx SINE Alu -5 307 1 213 141 16 47 chr10 33152395 33152459 -107164306 + CT-rich Low_complexity Low_complexity 4 65 0 1505 239 42 13 chr10 33152469 33152921 -107163844 - L1MC5 LINE L1 -493 7468 7004 2153 106 7 3 chr10 33153219 33153511 -107163254 - AluSc SINE Alu -16 293 1 234 286 54 18 chr10 33153512 33153624 -107163141 - MIR SINE MIR -115 147 32 284 314 0 20 chr10 33153769 33153871 -107162894 + L2 LINE L2 2595 2694 -620 2156 309 67 77 chr10 33153923 33156479 -107160286 + HERVI LTR ERV1 5128 7656 -129 4199 197 51 18 chr10 33157452 33158275 -107158490 - L1MB8 LINE L1 -5 6173 5379 1663 167 4 18 chr10 33158275 33158550 -107158215 - AluJb SINE Alu -12 300 30 4199 197 51 18 chr10 33158550 33158901 -107157864 - L1MB8 LINE L1 -799 5379 5041 1720 167 3 39 chr10 33158901 33159071 -107157694 - AluJb SINE Alu -16 296 140 2329 122 0 0 chr10 33159071 33159383 -107157382 - AluSx SINE Alu 0 312 1 1063 127 6 12 chr10 33159383 33159517 -107157248 - AluJo SINE Alu -177 135 3 1720 167 3 39 chr10 33159383 33159517 -107157248 - AluJb SINE Alu -172 140 3 4199 197 51 18 chr10 33159517 33160038 -107156727 - L1MB8 LINE L1 -1137 5041 4425 924 154 0 0 chr10 33160038 33160181 -107156584 - FRAM SINE Alu -6 170 28 1676 178 3 3 chr10 33160217 33160509 -107156256 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 33160509 33160539 -107156226 + AT_rich Low_complexity Low_complexity 1 30 0 2122 123 0 0 chr10 33160592 33160901 -107155864 - AluSx SINE Alu -3 309 1 1676 208 46 3 chr10 33160902 33161253 -107155512 - L1MC1 LINE L1 -9 6324 5959 4245 240 14 6 chr10 33161269 33162325 -107154440 - L1MC1 LINE L1 -1011 5135 4071 272 258 22 11 chr10 33162323 33162412 -107154353 - L1MB8 LINE L1 -1762 4384 4295 * 396 307 39 39 chr10 33162431 33162610 -107154155 - L1ME4a LINE L1 -284 5837 5659 1882 146 3 13 chr10 33162661 33162976 -107153789 - AluSx SINE Alu 0 312 1 1937 156 32 51 chr10 33163194 33163252 -107153513 + MLT1A1 LTR MaLR 1 59 -306 2213 99 0 0 chr10 33163252 33163545 -107153220 + AluSc SINE Alu 1 293 -16 1937 156 32 51 chr10 33163545 33163858 -107152907 + MLT1A1 LTR MaLR 59 365 0 1173 118 72 5 chr10 33164141 33164336 -107152429 + MER83C LTR ERV1 2 209 -164 272 205 36 12 chr10 33164458 33164541 -107152224 - MER53 DNA DNA -82 107 23 * 314 195 37 0 chr10 33164471 33164553 -107152212 + MER53 DNA DNA 105 189 0 326 212 50 40 chr10 33164895 33164994 -107151771 - MIR3 SINE MIR -15 193 94 912 177 23 23 chr10 33165050 33165225 -107151540 + LTR9 LTR ERV1 438 612 0 1289 72 0 6 chr10 33165236 33165402 -107151363 + MER41-int LTR ERV1 4838 5002 -944 609 178 10 0 chr10 33165404 33165505 -107151260 + MSTD LTR MaLR 246 347 -49 602 203 45 38 chr10 33165915 33166048 -107150717 - MER20 DNA MER1_type -36 183 50 710 128 4 0 chr10 33166048 33166165 -107150600 + L1PB4 LINE L1 5685 5789 -367 25 65 0 0 chr10 33166171 33166217 -107150548 + AT_rich Low_complexity Low_complexity 1 46 0 278 126 50 44 chr10 33166224 33166383 -107150382 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 30 69 0 20 chr10 33166390 33166454 -107150311 + AT_rich Low_complexity Low_complexity 1 65 -34 2302 146 13 5 chr10 33166454 33166831 -107149934 + L1PB4 LINE L1 5776 6155 -1 1769 157 0 10 chr10 33166839 33167132 -107149633 + AluSx SINE Alu 1 290 -22 30 69 0 20 chr10 33167132 33167159 -107149606 + AT_rich Low_complexity Low_complexity 72 99 0 648 157 0 0 chr10 33167166 33167268 -107149497 + FRAM SINE Alu 1 101 -75 21 0 0 0 chr10 33167275 33167296 -107149469 + AT_rich Low_complexity Low_complexity 1 21 0 1865 139 41 0 chr10 33168425 33168720 -107148045 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr10 33168731 33168753 -107148012 + AT_rich Low_complexity Low_complexity 1 22 0 1176 141 77 56 chr10 33169153 33169352 -107147413 - L1PB4 LINE L1 -1 6155 5949 1584 163 71 0 chr10 33169352 33169634 -107147131 - AluJb SINE Alu -10 302 1 1176 141 77 56 chr10 33169634 33169668 -107147097 - L1PB4 LINE L1 -207 5949 5917 843 207 224 46 chr10 33169965 33170238 -107146527 + L1MC4 LINE L1 6888 7238 -804 2265 78 3 3 chr10 33170238 33170534 -107146231 + AluSc SINE Alu 1 296 -13 843 207 224 46 chr10 33170534 33170608 -107146157 + L1MC4 LINE L1 7238 7297 -745 729 229 6 22 chr10 33170608 33170791 -107145974 - AluJb SINE Alu -3 309 130 339 207 100 93 chr10 33171139 33171279 -107145486 - MIR SINE MIR -76 186 46 202 266 0 31 chr10 33172472 33172536 -107144229 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1072 140 0 0 chr10 33172755 33172919 -107143846 + FRAM SINE Alu 1 164 -12 233 281 0 16 chr10 33173282 33173346 -107143419 + L2 LINE L2 3206 3268 -4 1014 151 6 0 chr10 33173516 33173682 -107143083 - FRAM SINE Alu -9 167 1 260 216 20 0 chr10 33173697 33173748 -107143017 - MERVL LTR ERVL -2713 2772 2721 * 689 264 110 35 chr10 33173746 33173973 -107142792 - MERVL LTR ERVL -3445 2319 2076 3028 88 20 5 chr10 33173980 33174378 -107142387 + MLT2A1 LTR ERVL 1 404 -40 288 186 0 0 chr10 33174388 33174447 -107142318 + (CA)n Simple_repeat Simple_repeat 2 60 0 427 55 0 0 chr10 33174451 33174506 -107142259 + MLT2A1 LTR ERVL 399 453 0 986 307 26 48 chr10 33174568 33175103 -107141662 - MERVL LTR ERVL -3052 1977 1458 273 289 13 0 chr10 33175438 33175514 -107141251 - MER116 DNA Mariner 0 80 4 900 130 0 15 chr10 33175649 33175780 -107140985 + FLAM_C SINE Alu 5 133 0 2149 113 0 10 chr10 33176295 33176597 -107140168 + AluSx SINE Alu 1 299 -13 262 292 35 44 chr10 33176848 33176961 -107139804 + L2 LINE L2 2866 2977 -295 383 277 22 51 chr10 33177056 33177193 -107139572 + MIR SINE MIR 93 225 -37 359 248 152 29 chr10 33177218 33177323 -107139442 - MIR3 SINE MIR -15 193 76 182 331 86 65 chr10 33177517 33177656 -107139109 + L2 LINE L2 3111 3252 -20 2399 67 0 3 chr10 33178358 33178658 -107138107 + AluSp SINE Alu 3 301 -12 584 284 22 11 chr10 33178739 33178922 -107137843 + MIR SINE MIR 8 192 -70 1292 172 13 0 chr10 33178930 33179157 -107137608 - MER83C LTR ERV1 0 373 144 849 169 14 0 chr10 33179257 33179405 -107137360 - AluJb SINE Alu -10 302 153 189 367 0 0 chr10 33179592 33179652 -107137113 - L2 LINE L2 -54 3259 3200 1926 76 0 4 chr10 33179691 33179986 -107136779 + AluSq SINE Alu 35 328 0 386 315 112 0 chr10 33180963 33181106 -107135659 + MIR SINE MIR 60 218 -44 1775 150 10 19 chr10 33181241 33181548 -107135217 - AluJo SINE Alu -8 304 1 416 265 38 30 chr10 33182116 33182248 -107134517 - MIR SINE MIR -113 149 17 430 282 34 34 chr10 33182409 33182558 -107134207 - MIR SINE MIR -79 183 35 1885 139 4 0 chr10 33183191 33183510 -107133255 - AluSx SINE Alu 0 320 1 2250 223 42 8 chr10 33184047 33184545 -107132220 + LTR40a LTR ERVL 4 518 -1 2006 125 0 0 chr10 33184993 33185297 -107131468 - AluSg SINE Alu 0 304 1 513 209 22 50 chr10 33185301 33185440 -107131325 + Charlie1b DNA MER1_type 86 220 -303 467 264 167 14 chr10 33185744 33185888 -107130877 + MIR SINE MIR 20 185 -77 595 262 116 43 chr10 33185988 33186290 -107130475 - L3 LINE CR1 -84 1493 1170 2113 108 0 0 chr10 33187427 33187724 -107129041 - AluSx SINE Alu -15 297 1 369 43 0 0 chr10 33188195 33188242 -107128523 + (TC)n Simple_repeat Simple_repeat 2 48 0 1801 103 48 15 chr10 33188244 33188545 -107128220 - AluSx SINE Alu 0 310 1 328 352 74 22 chr10 33188549 33188779 -107127986 - L1ME4a LINE L1 0 6121 5880 851 210 0 22 chr10 33188873 33189054 -107127711 + FRAM SINE Alu 1 176 0 2442 77 0 0 chr10 33189059 33189370 -107127395 + AluY SINE Alu 1 311 0 1707 127 10 41 chr10 33189456 33189748 -107127017 + AluSx SINE Alu 5 287 -25 637 195 26 77 chr10 33189862 33190057 -107126708 + L1MC5 LINE L1 6730 6914 -1047 2099 113 0 7 chr10 33190066 33190366 -107126399 + AluSx SINE Alu 1 298 -14 462 202 135 0 chr10 33190406 33190510 -107126255 + MIR SINE MIR 144 261 -1 1063 45 0 8 chr10 33190894 33191026 -107125739 + AluSq/x SINE Alu 1 131 -181 830 166 0 7 chr10 33191960 33192099 -107124666 + FLAM_C SINE Alu 5 142 -1 373 354 0 0 chr10 33192126 33192253 -107124512 - MER20B DNA MER1_type -528 255 129 399 324 46 29 chr10 33192353 33192594 -107124171 - MIR SINE MIR -8 254 10 192 385 10 29 chr10 33192694 33192798 -107123967 + L3b LINE CR1 1479 1580 -3 6473 91 37 1 chr10 33193554 33194503 -107122262 + L1PA11 LINE L1 5191 6172 -2 22 0 0 0 chr10 33195172 33195194 -107121571 + AT_rich Low_complexity Low_complexity 1 22 0 1737 157 3 28 chr10 33195489 33195808 -107120957 - AluJb SINE Alu -1 311 1 255 282 45 90 chr10 33196147 33196234 -107120531 - MIR3 SINE MIR -42 166 88 2846 111 46 14 chr10 33196234 33196666 -107120099 + MER83 LTR ERV1 3 448 0 255 282 45 90 chr10 33196666 33196734 -107120031 - MIR3 SINE MIR -120 88 18 1791 291 98 20 chr10 33197080 33197312 -107119453 + L2 LINE L2 1892 2105 -1209 1209 165 102 133 chr10 33197312 33197792 -107118973 + MER4C LTR ERV1 1 465 0 1791 291 98 20 chr10 33197792 33198390 -107118375 + L2 LINE L2 2105 2786 -528 488 284 63 79 chr10 33198719 33198973 -107117792 + L2 LINE L2 3061 3310 -3 2153 121 0 0 chr10 33198988 33199293 -107117472 - AluSx SINE Alu -7 305 1 1391 259 74 22 chr10 33199492 33199951 -107116814 + MLT1F LTR MaLR 60 542 0 283 277 42 42 chr10 33199962 33200081 -107116684 - MIR SINE MIR -105 157 39 184 376 8 32 chr10 33202355 33202480 -107114285 - MIR3 SINE MIR -21 187 66 294 360 109 16 chr10 33202856 33203178 -107113587 + L2 LINE L2 2013 2364 -950 254 250 160 30 chr10 33203162 33203262 -107113503 + L2 LINE L2 3154 3266 -6 * 2411 158 44 17 chr10 33203377 33203853 -107112912 + L1PB3 LINE L1 5660 6148 -6 991 196 105 49 chr10 33203991 33204277 -107112488 - AluJo SINE Alu 0 302 1 1230 88 35 0 chr10 33204277 33204447 -107112318 - LTR39 LTR ERV1 -607 176 1 1992 117 7 0 chr10 33204825 33205123 -107111642 + AluSg SINE Alu 11 310 0 1946 104 0 77 chr10 33205393 33205729 -107111036 - AluSx SINE Alu 0 312 3 1069 201 87 84 chr10 33206052 33206070 -107110695 + LTR37B LTR ERV1 3 19 -449 1552 133 65 34 chr10 33206070 33206364 -107110401 + AluJo SINE Alu 3 305 -7 1069 201 87 84 chr10 33206364 33206807 -107109958 + LTR37B LTR ERV1 19 465 -3 1599 169 7 33 chr10 33206970 33207277 -107109488 - AluJo SINE Alu -13 299 1 2387 120 31 11 chr10 33207452 33207809 -107108956 - THE1B LTR MaLR 0 364 1 311 304 54 18 chr10 33207884 33207996 -107108769 - MER5B DNA MER1_type -4 174 59 1139 112 19 0 chr10 33208000 33208161 -107108604 - AluSg/x SINE Alu -15 297 134 1932 91 66 3 chr10 33208161 33208447 -107108318 - AluY SINE Alu -7 304 1 242 279 0 0 chr10 33208448 33208509 -107108256 + MER5B DNA MER1_type 116 176 -2 261 222 0 0 chr10 33208971 33209025 -107107740 + C-rich Low_complexity Low_complexity 4 57 0 911 163 6 12 chr10 33209860 33210032 -107106733 - FRAM SINE Alu -10 166 1 246 322 184 0 chr10 33210036 33210188 -107106577 - MIR SINE MIR -7 255 76 2375 77 10 10 chr10 33210413 33210720 -107106045 - AluSq SINE Alu -14 299 1 1548 202 0 14 chr10 33211474 33211751 -107105014 - AluJb SINE Alu -39 273 1 209 336 67 0 chr10 33212126 33212245 -107104520 + MIR SINE MIR 80 206 -56 1921 152 3 7 chr10 33212357 33212647 -107104118 - AluJo SINE Alu -23 289 1 215 261 70 52 chr10 33212654 33212769 -107103996 - L2 LINE L2 -16 3297 3181 1391 89 26 0 chr10 33213528 33213718 -107103047 + MER30 DNA MER1_type 1 195 -35 1926 75 0 4 chr10 33213864 33214116 -107102649 + L1PA8 LINE L1 5805 6055 -117 771 164 0 0 chr10 33214120 33214236 -107102529 - FLAM_C SINE Alu -22 121 6 1640 138 99 11 chr10 33214752 33215172 -107101593 + AluSx SINE Alu 5 449 0 1691 201 0 3 chr10 33215712 33216010 -107100755 - AluJb SINE Alu -15 297 1 834 219 51 20 chr10 33216071 33216267 -107100498 - MER58A DNA MER1_type 0 224 23 2463 58 0 3 chr10 33216950 33217243 -107099522 - AluY SINE Alu -19 292 1 2267 101 10 125 chr10 33217326 33217821 -107098944 - Tigger2 DNA MER2_type 0 2718 3 1020 154 63 91 chr10 33219412 33219665 -107097100 - AluJo SINE Alu -6 306 61 615 226 8 0 chr10 33219684 33219817 -107096948 + MLT1E2 LTR MaLR 65 198 -428 1525 243 78 23 chr10 33219859 33220292 -107096473 - MLT1E2 LTR MaLR -3 623 167 374 189 83 136 chr10 33220327 33220459 -107096306 + AluJb SINE Alu 49 173 -129 697 354 32 17 chr10 33220650 33220995 -107095770 - LTR33 LTR ERVL -171 350 1 601 272 19 0 chr10 33220996 33221158 -107095607 + HAL1 LINE L1 1669 1833 -674 * 1190 259 51 38 chr10 33221153 33221215 -107095550 - L1MEc LINE L1 -3309 2906 2846 3384 134 35 2 chr10 33221215 33221723 -107095042 - MER1A DNA MER1_type 0 527 3 1190 259 51 38 chr10 33221723 33222289 -107094476 - L1MEc LINE L1 -3369 2846 2230 1005 194 22 0 chr10 33222295 33222475 -107094290 - MER58A DNA MER1_type -4 220 37 2704 235 92 59 chr10 33222492 33222541 -107094224 - L1MEc LINE L1 -4123 2273 2227 2223 118 0 10 chr10 33222541 33222855 -107093910 - AluY SINE Alu 0 311 1 2704 235 92 59 chr10 33222855 33223527 -107093238 - L1MEc LINE L1 -4169 2227 1579 1629 146 30 61 chr10 33223527 33223822 -107092943 - AluJo SINE Alu -26 286 1 2704 235 92 59 chr10 33223822 33224526 -107092239 - L1MEc LINE L1 -4817 1579 800 2608 130 5 5 chr10 33224540 33224940 -107091825 - LTR43 LTR ERV1 0 602 203 327 167 197 0 chr10 33224946 33225012 -107091753 - MER58A DNA MER1_type -28 79 1 493 259 80 42 chr10 33225014 33225282 -107091483 + MER69 DNA AcHobo 2168 2449 -77 11514 33 0 0 chr10 33225282 33227389 -107089376 - L1PA4 LINE L1 -3 6152 4046 493 259 80 42 chr10 33227389 33227409 -107089356 + MER69 DNA AcHobo 2449 2467 -59 2484 90 3 0 chr10 33227416 33227727 -107089038 - AluSx SINE Alu 0 312 1 241 217 78 52 chr10 33228366 33228481 -107088284 + MIR SINE MIR 140 257 -5 685 89 105 16 chr10 33228557 33228681 -107088084 - AluYa5 SINE Alu -176 135 1 710 247 19 0 chr10 33229203 33229365 -107087400 + MER3 DNA MER1_type 1 165 -44 2539 173 61 19 chr10 33229372 33229535 -107087230 - L1MA9 LINE L1 0 6312 6157 219 36 0 0 chr10 33229535 33229563 -107087202 + (GA)n Simple_repeat Simple_repeat 1 28 0 2539 173 61 19 chr10 33229563 33229937 -107086828 - L1MA9 LINE L1 -155 6157 5752 242 191 0 0 chr10 33229943 33229990 -107086775 + MER3 DNA MER1_type 154 200 -9 1017 289 35 8 chr10 33230035 33230409 -107086356 - L1ME4a LINE L1 -244 5877 5494 369 316 132 20 chr10 33230508 33230910 -107085855 + LTR16A LTR ERVL 1 447 -3 1751 174 30 10 chr10 33231075 33231374 -107085391 + AluJo SINE Alu 1 305 -7 1776 185 7 3 chr10 33231571 33231869 -107084896 - AluJo SINE Alu -13 299 1 493 84 0 56 chr10 33233311 33233418 -107083347 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 222 271 17 0 chr10 33233425 33233484 -107083281 + C-rich Low_complexity Low_complexity 1 60 0 2181 188 161 128 chr10 33233677 33233792 -107082973 + L1MC3 LINE L1 6672 6782 -1003 2234 101 0 7 chr10 33233792 33234088 -107082677 + AluSc SINE Alu 1 294 -15 2181 188 161 128 chr10 33234088 33234410 -107082355 + L1MC3 LINE L1 6782 7092 -693 457 262 19 0 chr10 33234410 33234513 -107082252 + MLT1F1 LTR MaLR 45 149 -418 2181 188 161 128 chr10 33234513 33234976 -107081789 + L1MC3 LINE L1 7092 7709 -76 2050 160 0 0 chr10 33235424 33235736 -107081029 - AluJo SINE Alu 0 312 1 649 255 112 61 chr10 33236659 33237169 -107079596 - Charlie7 DNA MER1_type 0 2612 2077 925 283 145 2 chr10 33237177 33237576 -107079189 - L1MC/D LINE L1 -2002 5806 5351 617 200 0 31 chr10 33237715 33237845 -107078920 + AluJb SINE Alu 153 278 -34 21 0 0 0 chr10 33237846 33237867 -107078898 + AT_rich Low_complexity Low_complexity 1 21 0 2162 111 4 0 chr10 33237867 33238173 -107078592 + AluSg SINE Alu 1 307 0 408 398 0 0 chr10 33238337 33238508 -107078257 + MIR SINE MIR 67 237 -25 2345 101 3 0 chr10 33238555 33238862 -107077903 - AluSp SINE Alu -4 309 2 269 167 4 40 chr10 33239026 33239101 -107077664 + L1P2 LINE L1 5704 5776 -379 2222 85 0 7 chr10 33239596 33239919 -107076846 + AluSc SINE Alu 1 321 0 781 158 0 15 chr10 33240118 33240251 -107076514 + FLAM_C SINE Alu 3 133 0 1794 141 0 4 chr10 33240718 33240988 -107075777 + AluSx SINE Alu 42 310 -2 1686 160 38 21 chr10 33241010 33241298 -107075467 + AluJo SINE Alu 1 293 -19 247 235 0 44 chr10 33241389 33241457 -107075308 + MIR SINE MIR 83 147 -61 515 145 0 24 chr10 33242224 33242307 -107074458 + AluJ/FLAM SINE Alu 2 82 -230 834 109 9 0 chr10 33242410 33242520 -107074245 - FLAM_C SINE Alu -32 111 1 1913 86 35 0 chr10 33242780 33243036 -107073729 + AluY SINE Alu 46 310 -1 27 0 0 0 chr10 33243079 33243106 -107073659 + AT_rich Low_complexity Low_complexity 1 27 0 1011 158 54 49 chr10 33243272 33243452 -107073313 + AluJo SINE Alu 101 279 -33 180 0 0 0 chr10 33243452 33243472 -107073293 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 611 217 31 0 chr10 33243474 33243603 -107073162 + FLAM_C SINE Alu 1 133 0 1011 158 54 49 chr10 33243603 33243622 -107073143 + AluJo SINE Alu 279 304 -8 1267 71 0 11 chr10 33243626 33243808 -107072957 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 468 163 10 10 chr10 33243836 33243934 -107072831 + GA-rich Low_complexity Low_complexity 4 101 0 1379 160 0 5 chr10 33245543 33245756 -107071009 - AluSx SINE Alu -100 212 1 3573 220 27 23 chr10 33245901 33247549 -107069216 + L1MD3 LINE L1 4282 5403 -743 284 245 0 4 chr10 33248756 33248997 -107067768 + (CA)n Simple_repeat Simple_repeat 1 239 0 180 229 214 43 chr10 33249659 33249729 -107067036 - L2 LINE L2 0 3313 3232 441 316 89 48 chr10 33249837 33250585 -107066180 - L2 LINE L2 -205 3067 2289 981 162 29 0 chr10 33250826 33250999 -107065766 + MER2 DNA MER2_type 2 179 -166 858 217 0 0 chr10 33251099 33251256 -107065509 - AluJb SINE Alu -142 170 14 1207 122 0 12 chr10 33251475 33251647 -107065118 + AluSg/x SINE Alu 122 291 -18 2320 82 4 0 chr10 33251650 33251999 -107064766 + AluY SINE Alu 1 350 0 237 97 0 0 chr10 33252570 33252601 -107064164 + (GA)n Simple_repeat Simple_repeat 1 31 0 693 114 0 0 chr10 33252601 33252706 -107064059 + (GAAAA)n Simple_repeat Simple_repeat 5 109 0 1700 177 10 13 chr10 33252842 33253141 -107063624 - AluJo SINE Alu -14 298 1 2299 94 0 3 chr10 33255632 33255930 -107060835 + AluSq SINE Alu 1 297 -16 1839 163 3 3 chr10 33255940 33256234 -107060531 + AluJb SINE Alu 1 294 -18 784 139 134 70 chr10 33256566 33256738 -107060027 + AluJo SINE Alu 15 197 -115 592 248 8 0 chr10 33256738 33256863 -107059902 + MER21B LTR ERV1 133 258 -605 2115 115 0 16 chr10 33256869 33257173 -107059592 + AluSc SINE Alu 2 300 -9 652 165 0 0 chr10 33257174 33257277 -107059488 + AluJo/FRAM SINE Alu 136 238 -74 2314 100 3 3 chr10 33257727 33258037 -107058728 - AluSq SINE Alu -3 310 1 22 0 0 0 chr10 33259605 33259627 -107057138 + AT_rich Low_complexity Low_complexity 1 22 0 1658 211 34 50 chr10 33259633 33260069 -107056696 + L1MB7 LINE L1 5668 6096 -88 1780 155 10 17 chr10 33260083 33260373 -107056392 + AluJo SINE Alu 2 289 -23 759 83 0 0 chr10 33260473 33260581 -107056184 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 1032 134 27 0 chr10 33260581 33260730 -107056035 + FRAM SINE Alu 1 150 -26 35 24 0 0 chr10 33260731 33260773 -107055992 + AT_rich Low_complexity Low_complexity 1 42 0 1812 54 0 0 chr10 33260907 33261129 -107055636 + L1PA5 LINE L1 5931 6152 -2 27 0 0 0 chr10 33261129 33261156 -107055609 + AT_rich Low_complexity Low_complexity 1 27 0 186 291 58 68 chr10 33262994 33263097 -107053668 - MIR SINE MIR -42 220 119 1689 167 0 25 chr10 33263811 33264129 -107052636 - AluJo SINE Alu -2 310 1 1288 179 21 0 chr10 33265604 33265838 -107050927 - L1MA6 LINE L1 -75 6225 5987 231 36 0 0 chr10 33265935 33265963 -107050802 + (CA)n Simple_repeat Simple_repeat 2 29 0 289 318 33 40 chr10 33267726 33267877 -107048888 - MIR SINE MIR -104 158 9 271 109 0 36 chr10 33268145 33268200 -107048565 + (TTCCC)n Simple_repeat Simple_repeat 2 54 0 338 192 0 13 chr10 33268230 33268308 -107048457 + CT-rich Low_complexity Low_complexity 1 77 0 2011 122 35 0 chr10 33268537 33268825 -107047940 - AluSx SINE Alu -14 298 1 456 271 131 37 chr10 33269448 33269662 -107047103 + MIR SINE MIR 20 253 -9 1546 153 0 77 chr10 33270041 33270177 -107046588 + AluJb SINE Alu 1 146 -166 2095 89 4 0 chr10 33270177 33270457 -107046308 + AluSp SINE Alu 1 281 -32 699 47 47 0 chr10 33270457 33270563 -107046202 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 1546 153 0 77 chr10 33270563 33270738 -107046027 + AluJb SINE Alu 144 289 -23 1379 234 50 34 chr10 33270742 33270994 -107045771 + MER21B LTR ERV1 14 260 -603 2298 85 3 0 chr10 33270994 33271289 -107045476 + AluSc SINE Alu 1 296 -13 1379 234 50 34 chr10 33271289 33271627 -107045138 + MER21B LTR ERV1 260 718 -145 2034 100 4 0 chr10 33271636 33271915 -107044850 - L1PA12 LINE L1 -15 6153 5874 846 58 0 0 chr10 33271915 33272019 -107044746 + L1P4 LINE L1 5684 5787 -381 794 221 74 22 chr10 33272119 33272350 -107044415 + L1MD3 LINE L1 7737 7979 -16 745 266 70 4 chr10 33272351 33272607 -107044158 - Charlie7 DNA MER1_type -898 1714 1442 1092 189 37 37 chr10 33272977 33273247 -107043518 - L1MB5 LINE L1 -1 6173 5904 586 259 38 49 chr10 33273253 33273438 -107043327 + MER5A DNA MER1_type 1 183 -6 779 219 102 20 chr10 33274098 33274294 -107042471 - AluJb SINE Alu -100 212 1 296 272 62 0 chr10 33274425 33274506 -107042259 + L2 LINE L2 2230 2315 -999 656 173 0 0 chr10 33275536 33275683 -107041082 - FLAM_A SINE Alu 0 164 18 1978 129 26 3 chr10 33276099 33276402 -107040363 + AluSg SINE Alu 1 310 0 463 213 128 35 chr10 33276430 33276571 -107040194 + L2 LINE L2 3160 3313 0 3040 99 25 2 chr10 33276647 33277081 -107039684 + L1PB1 LINE L1 5708 6151 0 1215 119 0 10 chr10 33278017 33278218 -107038547 + AluSc SINE Alu 111 309 0 335 203 0 14 chr10 33278319 33278393 -107038372 + Charlie5 DNA MER1_type 2552 2624 0 1649 180 0 26 chr10 33281884 33282195 -107034570 - AluJo SINE Alu -7 305 3 263 243 215 0 chr10 33282224 33282331 -107034434 + MIR3 SINE MIR 53 182 -26 231 291 78 29 chr10 33282990 33283093 -107033672 - MARNA DNA Mariner -31 555 448 361 313 123 5 chr10 33283124 33283319 -107033446 + MARNA DNA Mariner 234 451 -135 214 280 38 61 chr10 33283427 33283559 -107033206 - MIR SINE MIR -69 193 65 1269 171 13 0 chr10 33283876 33284110 -107032655 - L1MC1 LINE L1 -247 6086 5850 2116 103 10 0 chr10 33284111 33284531 -107032234 + AluSg SINE Alu 1 423 0 3484 192 20 18 chr10 33284531 33285896 -107030869 - L1MC1 LINE L1 -474 5859 4491 243 146 0 0 chr10 33286901 33286942 -107029823 + (CA)n Simple_repeat Simple_repeat 2 42 0 224 284 34 11 chr10 33288104 33288192 -107028573 + CT-rich Low_complexity Low_complexity 1 90 0 897 263 46 4 chr10 33288193 33288452 -107028313 - L1MC4 LINE L1 -152 7890 7621 841 188 26 86 chr10 33292503 33292553 -107024212 + MER58A DNA MER1_type 4 55 -2365 1679 169 0 25 chr10 33292553 33292867 -107023898 - AluJo SINE Alu -6 306 1 841 188 26 86 chr10 33292867 33293050 -107023715 + MER58A DNA MER1_type 55 223 -1 702 274 153 17 chr10 33294328 33294675 -107022090 - MLT1K LTR MaLR -174 414 21 229 335 147 13 chr10 33295292 33295516 -107021249 + L3 LINE CR1 1199 1452 -125 1121 74 0 14 chr10 33295744 33295892 -107020873 + LOR1a LTR ERV1 13 158 -339 1334 170 98 0 chr10 33295930 33296195 -107020570 + AluJb SINE Alu 21 311 -1 1028 129 6 0 chr10 33296211 33296374 -107020391 + LOR1a LTR ERV1 204 367 -130 27 29 0 0 chr10 33297902 33297936 -107018829 + AT_rich Low_complexity Low_complexity 1 34 0 1652 158 18 7 chr10 33298987 33299266 -107017499 + AluJo SINE Alu 1 282 -30 212 57 0 29 chr10 33299269 33299304 -107017461 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 197 224 75 30 chr10 33299742 33299809 -107016956 + MIR3 SINE MIR 5 74 -134 654 181 25 125 chr10 33299885 33300127 -107016638 + MLT1J LTR MaLR 110 409 -206 2193 76 4 0 chr10 33300705 33300981 -107015784 + AluSg SINE Alu 1 277 -33 312 70 0 0 chr10 33300985 33301028 -107015737 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1775 164 26 0 chr10 33301796 33302100 -107014665 - AluJo SINE Alu 0 312 1 2144 114 0 0 chr10 33302531 33302821 -107013944 + AluSq SINE Alu 1 290 -23 25 0 0 0 chr10 33302825 33302850 -107013915 + AT_rich Low_complexity Low_complexity 1 25 0 347 228 76 58 chr10 33303494 33303665 -107013100 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr10 33305789 33305810 -107010955 + AT_rich Low_complexity Low_complexity 1 21 0 2189 119 0 0 chr10 33306067 33306370 -107010395 + AluSc SINE Alu 1 303 -6 200 349 75 9 chr10 33307123 33307229 -107009536 - MER5B DNA MER1_type 0 178 66 317 261 33 11 chr10 33308657 33308749 -107008016 + MIR SINE MIR 19 112 -150 850 161 40 7 chr10 33309906 33310055 -107006710 - AluJb SINE Alu -22 290 137 1972 133 3 0 chr10 33310695 33310997 -107005768 + AluSx SINE Alu 1 303 -9 454 200 24 0 chr10 33311118 33311203 -107005562 - MER4C LTR ERV1 0 465 379 947 158 58 12 chr10 33311205 33311376 -107005389 - THE1C LTR MaLR -196 179 1 276 288 0 0 chr10 33311379 33311445 -107005320 - LTR59 LTR ERV1 -177 420 355 * 718 210 160 13 chr10 33311417 33311655 -107005110 - MER4C LTR ERV1 -192 273 1 2135 82 17 0 chr10 33311691 33311982 -107004783 - AluSx SINE Alu -16 296 1 2622 51 57 3 chr10 33313541 33313891 -107002874 - L1PA13 LINE L1 -1 6162 5794 406 120 53 0 chr10 33314211 33314286 -107002479 + L1MA5A LINE L1 6214 6292 -5 345 47 0 0 chr10 33314909 33314952 -107001813 + (TG)n Simple_repeat Simple_repeat 2 44 0 1478 163 16 0 chr10 33315105 33315356 -107001409 + AluJb SINE Alu 1 255 -57 913 178 0 6 chr10 33315369 33315532 -107001233 + AluJo SINE Alu 120 281 -31 2377 163 20 26 chr10 33315742 33316202 -107000563 - LTR32 LTR ERVL 0 471 15 2031 151 0 0 chr10 33316857 33317169 -106999596 + AluJb SINE Alu 1 312 0 1688 174 0 4 chr10 33317689 33318015 -106998750 - AluJo SINE Alu 0 327 3 2164 151 20 13 chr10 33318231 33318621 -106998144 - L1MB3 LINE L1 -8 6175 5783 734 168 0 0 chr10 33319524 33319637 -106997128 + FLAM_C SINE Alu 1 113 -30 195 125 0 0 chr10 33319642 33319682 -106997083 + (T)n Simple_repeat Simple_repeat 1 40 0 680 213 0 0 chr10 33319789 33319947 -106996818 + AluJb SINE Alu 161 318 0 21 0 0 0 chr10 33320176 33320197 -106996568 + AT_rich Low_complexity Low_complexity 1 21 0 195 318 0 16 chr10 33321028 33321091 -106995674 + MIR SINE MIR 36 97 -165 23 33 0 0 chr10 33321850 33321880 -106994885 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 33322169 33322190 -106994575 + AT_rich Low_complexity Low_complexity 1 21 0 940 176 6 6 chr10 33322190 33322360 -106994405 + L1PA16 LINE L1 5997 6166 0 285 75 0 0 chr10 33322605 33322645 -106994120 + (TC)n Simple_repeat Simple_repeat 1 40 0 1935 133 3 0 chr10 33322645 33322938 -106993827 - AluJb SINE Alu -16 296 3 317 222 111 33 chr10 33323400 33323490 -106993275 - L2 LINE L2 -6 3266 3170 2244 87 0 7 chr10 33323813 33324113 -106992652 + AluSq SINE Alu 1 298 -15 270 176 0 0 chr10 33326787 33326838 -106989927 + CT-rich Low_complexity Low_complexity 4 54 0 624 62 0 0 chr10 33326841 33326922 -106989843 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 2323 75 3 0 chr10 33328172 33328464 -106988301 - AluSc SINE Alu -16 293 1 21 0 0 0 chr10 33329102 33329123 -106987642 + AT_rich Low_complexity Low_complexity 1 21 0 2021 116 7 23 chr10 33329139 33329449 -106987316 + AluSc SINE Alu 1 305 -4 220 167 0 33 chr10 33329806 33329866 -106986899 + GA-rich Low_complexity Low_complexity 2 59 0 40 21 0 0 chr10 33330026 33330073 -106986692 + AT_rich Low_complexity Low_complexity 1 47 0 1416 162 0 78 chr10 33330073 33330369 -106986396 - AluJo SINE Alu -22 290 18 289 307 137 1 chr10 33331660 33331770 -106984995 + MIR SINE MIR 36 159 -50 361 207 81 45 chr10 33331794 33331905 -106984860 - MER63 DNA MER1_type -273 789 675 205 330 30 0 chr10 33332195 33332305 -106984460 - MIR SINE MIR -17 191 78 514 314 66 19 chr10 33333537 33333808 -106982957 + L3 LINE CR1 1095 1378 -199 2362 67 7 0 chr10 33333813 33334112 -106982653 + AluY SINE Alu 1 301 -10 2045 119 0 31 chr10 33334115 33334434 -106982331 + AluSg1 SINE Alu 1 309 0 2132 117 3 0 chr10 33334710 33335019 -106981746 - AluSx SINE Alu -2 310 1 588 275 38 33 chr10 33335560 33335771 -106980994 - L1ME LINE L1 -380 5741 5530 827 165 104 12 chr10 33335803 33335967 -106980798 + FRAM SINE Alu 1 173 -3 265 283 61 0 chr10 33336019 33336118 -106980647 + L1ME4a LINE L1 5804 5908 -213 181 274 78 0 chr10 33336294 33336345 -106980420 - MIR SINE MIR -2 260 206 261 280 160 76 chr10 33337178 33337394 -106979371 + L2 LINE L2 2463 2660 -654 408 290 15 0 chr10 33337394 33337525 -106979240 + MER94 DNA DNA 2 134 0 261 280 160 76 chr10 33337525 33337740 -106979025 + L2 LINE L2 2660 2930 -384 4349 219 33 29 chr10 33337894 33339398 -106977367 + L1MCb LINE L1 3 1517 -4851 206 369 54 13 chr10 33339426 33339575 -106977190 + L2 LINE L2 2640 2794 -520 1545 157 30 50 chr10 33339723 33339857 -106976908 + AluJo SINE Alu 6 141 -171 1360 166 17 83 chr10 33339857 33340195 -106976570 + AluJb SINE Alu 1 318 0 1545 157 30 50 chr10 33340195 33340359 -106976406 + AluJo SINE Alu 141 299 -13 468 246 105 12 chr10 33340488 33340659 -106976106 + LTR37B LTR ERV1 12 198 -270 393 239 18 9 chr10 33340704 33340817 -106975948 + LTR37B LTR ERV1 197 310 -158 245 288 132 47 chr10 33340999 33341064 -106975701 + LTR16B LTR ERVL 34 92 -372 2085 141 15 24 chr10 33341064 33341404 -106975361 + MER1B DNA MER1_type 1 337 0 245 288 132 47 chr10 33341404 33341595 -106975170 + LTR16B LTR ERVL 92 312 -152 24 0 0 0 chr10 33342026 33342050 -106974715 + AT_rich Low_complexity Low_complexity 1 24 0 184 217 29 43 chr10 33343748 33343817 -106972948 + L2 LINE L2 2992 3059 -213 2038 131 45 25 chr10 33343858 33344217 -106972548 - MLT1B LTR MaLR -3 387 22 1748 157 7 3 chr10 33344289 33344576 -106972189 - AluJo SINE Alu -24 288 1 1975 149 0 0 chr10 33345225 33345533 -106971232 - AluJo SINE Alu -4 308 1 1702 159 3 10 chr10 33346323 33346612 -106970153 - AluJb SINE Alu -23 289 3 3362 152 0 36 chr10 33346855 33347403 -106969362 + MER1A DNA MER1_type 1 528 -1 1975 115 0 10 chr10 33347539 33347863 -106968902 - AluY SINE Alu 0 311 1 948 168 0 12 chr10 33347867 33348040 -106968725 - AluJo SINE Alu -18 294 124 823 226 0 0 chr10 33348259 33348414 -106968351 + AluJb SINE Alu 14 168 -144 1782 137 21 3 chr10 33348514 33348627 -106968138 + AluJb SINE Alu 15 125 -187 183 42 0 0 chr10 33348627 33348651 -106968114 + (CA)n Simple_repeat Simple_repeat 2 25 0 1782 137 21 3 chr10 33348651 33348822 -106967943 + AluJb SINE Alu 125 304 -8 1595 172 11 4 chr10 33350361 33350640 -106966125 - AluJo SINE Alu -31 281 1 806 211 92 11 chr10 33351208 33351393 -106965372 - MER20 DNA MER1_type -19 200 1 1546 182 3 26 chr10 33357393 33357700 -106959065 - AluJb SINE Alu -1 311 12 292 127 91 18 chr10 33357700 33358141 -106958624 + MIR3 SINE MIR 121 179 -29 185 222 0 185 chr10 33357710 33357750 -106959015 + L3b LINE CR1 1515 1534 -49 * 2249 119 21 52 chr10 33357750 33358137 -106958628 - THE1C LTR MaLR 0 375 1 185 222 0 185 chr10 33358137 33358177 -106958588 + L3b LINE CR1 1534 1580 -3 1886 144 37 0 chr10 33358833 33359131 -106957634 + AluSx SINE Alu 2 310 -2 1979 146 0 16 chr10 33359154 33359469 -106957296 + AluSx SINE Alu 1 310 -2 405 328 15 30 chr10 33359581 33359715 -106957050 - L2 LINE L2 -2 3311 3180 1819 116 0 57 chr10 33360055 33360356 -106956409 - AluSq SINE Alu -29 284 1 337 314 14 7 chr10 33360564 33360704 -106956061 + LTR67 LTR ERVL 417 557 0 2004 143 3 3 chr10 33361042 33361349 -106955416 - Tigger1 DNA MER2_type -194 2224 1918 475 144 11 0 chr10 33361361 33361451 -106955314 - L1PB2 LINE L1 -3 6148 6058 1947 135 0 19 chr10 33361456 33361774 -106954991 - AluSx SINE Alu 0 312 1 632 203 57 0 chr10 33362081 33362204 -106954561 + MLT1A1 LTR MaLR 3 132 -233 2090 171 79 3 chr10 33362223 33362268 -106954497 - MSTB LTR MaLR -16 410 370 1718 114 0 0 chr10 33362268 33362513 -106954252 + AluSx SINE Alu 55 299 -13 2090 171 79 3 chr10 33362513 33362848 -106953917 - MSTB LTR MaLR -56 370 1 930 214 64 56 chr10 33362848 33363010 -106953755 + MLT1A1 LTR MaLR 134 293 -72 297 0 0 0 chr10 33363010 33363043 -106953722 + (TG)n Simple_repeat Simple_repeat 2 34 0 1826 155 0 3 chr10 33363043 33363334 -106953431 - AluSx SINE Alu -16 296 7 930 214 64 56 chr10 33363334 33363400 -106953365 + MLT1A1 LTR MaLR 292 365 0 1925 168 0 13 chr10 33364048 33364363 -106952402 - AluJb SINE Alu -1 311 1 2225 123 3 0 chr10 33364371 33364672 -106952093 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 33365746 33365774 -106950991 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 33365862 33365883 -106950882 + AT_rich Low_complexity Low_complexity 1 21 0 1753 143 10 43 chr10 33368600 33368901 -106947864 + AluJo SINE Alu 1 291 -21 5306 142 102 130 chr10 33369546 33371155 -106945610 - pTR5 LTR ERV1 0 2438 743 772 269 75 5 chr10 33371816 33372028 -106944737 - MLT1H1 LTR MaLR -328 227 1 421 235 10 3 chr10 33372034 33372142 -106944623 + MLT1J LTR MaLR 228 418 -197 264 306 45 0 chr10 33372656 33372790 -106943975 - MLT1J2-int LTR MaLR -833 538 399 1898 158 0 29 chr10 33372914 33373224 -106943541 + AluSx SINE Alu 1 301 -11 268 284 14 0 chr10 33373244 33373318 -106943447 - MLT1J2-int LTR MaLR -1283 88 14 194 322 161 21 chr10 33373506 33373649 -106943116 - L2 LINE L2 -212 3060 2898 596 310 13 8 chr10 33373951 33374190 -106942575 + LTR16B LTR ERVL 223 462 -2 499 274 76 36 chr10 33374267 33374544 -106942221 - L2 LINE L2 -710 2604 2317 627 198 0 8 chr10 33374846 33374967 -106941798 + FLAM_A SINE Alu 4 123 -10 680 214 0 53 chr10 33375108 33375295 -106941470 + AluJo SINE Alu 118 294 -18 287 213 62 0 chr10 33376719 33376799 -106939966 - HERVFH21 LTR ERV1 -6427 102 18 195 42 0 0 chr10 33379305 33379329 -106937436 + (T)n Simple_repeat Simple_repeat 1 24 0 25 65 0 0 chr10 33379792 33379838 -106936927 + GC_rich Low_complexity Low_complexity 1 46 0 205 289 58 41 chr10 33380182 33380303 -106936462 + MIR3 SINE MIR 44 166 -42 990 158 55 0 chr10 33381114 33381279 -106935486 - AluJo/FRAM SINE Alu -4 308 135 1674 203 3 7 chr10 33381279 33381584 -106935181 - AluJo SINE Alu -8 304 1 745 275 201 26 chr10 33382010 33382388 -106934377 - MLT1J2 LTR MaLR 0 450 7 477 277 47 107 chr10 33382403 33382832 -106933933 - LTR67 LTR ERVL -88 469 67 631 345 76 26 chr10 33383008 33383390 -106933375 - L3 LINE CR1 -3 1574 1174 397 256 227 19 chr10 33384124 33384393 -106932372 - L1ME4a LINE L1 -4 6117 5793 317 208 0 123 chr10 33384428 33384534 -106932231 - L2 LINE L2 -38 3275 3183 2300 99 0 37 chr10 33384760 33385083 -106931682 - AluSq SINE Alu 0 313 3 1832 147 36 19 chr10 33385170 33385477 -106931288 - AluJo SINE Alu 0 312 1 348 206 0 0 chr10 33385478 33385546 -106931219 + MSTD LTR MaLR 329 396 0 226 75 25 0 chr10 33386454 33386494 -106930271 - HSMAR1 DNA Mariner -1246 41 1 329 24 0 0 chr10 33386507 33386548 -106930217 + MADE1 DNA Mariner 40 80 0 192 316 23 30 chr10 33386569 33386702 -106930063 + L2 LINE L2 2726 2857 -457 824 270 138 6 chr10 33386750 33387069 -106929696 + L2 LINE L2 2953 3313 0 240 362 31 16 chr10 33387435 33387562 -106929203 + LTR16C LTR ERVL 100 228 -263 1745 168 27 3 chr10 33387879 33388215 -106928550 - MER7A DNA MER2_type -1 345 1 353 323 70 7 chr10 33388241 33388472 -106928293 + MERVL LTR ERVL 410 617 -4379 1700 179 0 42 chr10 33388873 33389110 -106927655 - AluJo SINE Alu 0 312 131 2044 103 21 28 chr10 33389110 33389401 -106927364 + AluSx SINE Alu 3 291 -21 1700 179 0 42 chr10 33389401 33389527 -106927238 - AluJo SINE Alu -181 131 1 365 402 4 4 chr10 33389529 33389763 -106927002 + MERVL LTR ERVL 1056 1289 -3707 1999 135 11 3 chr10 33389802 33390131 -106926634 - AluSq SINE Alu 0 331 1 2214 114 117 16 chr10 33390131 33390507 -106926258 - MSTA LTR MaLR -14 414 1 903 315 64 30 chr10 33390701 33391139 -106925626 + MERVL LTR ERVL 1724 2176 -3478 582 300 115 12 chr10 33391191 33391434 -106925331 + MERVL LTR ERVL 2326 2593 -3171 769 351 20 46 chr10 33391471 33391861 -106924904 + MERVL LTR ERVL 2644 3023 -1973 368 343 0 4 chr10 33391891 33392033 -106924732 + MERVL LTR ERVL 3144 3259 -2226 1607 166 0 23 chr10 33392969 33393234 -106923531 - AluJo SINE Alu -53 259 1 244 261 72 63 chr10 33394373 33394484 -106922281 - MIR SINE MIR -149 113 2 2302 119 0 0 chr10 33394674 33394977 -106921788 - AluSx SINE Alu -7 305 3 406 95 135 0 chr10 33394979 33395053 -106921712 - L1MA3 LINE L1 -44 6261 6178 2060 199 19 17 chr10 33395481 33395958 -106920807 + L1MB8 LINE L1 5695 6172 -6 723 102 0 17 chr10 33395958 33396076 -106920689 - AluSg/x SINE Alu -19 291 176 315 245 20 59 chr10 33396211 33396313 -106920452 + L1ME LINE L1 5224 5321 -825 370 346 63 0 chr10 33396318 33396523 -106920242 + L1ME LINE L1 5519 5736 -385 1931 141 3 0 chr10 33396682 33396989 -106919776 - AluJb SINE Alu 0 308 1 2542 61 0 0 chr10 33397372 33397666 -106919099 + AluY SINE Alu 1 294 -17 2289 159 35 46 chr10 33397807 33398267 -106918498 + MLT1C LTR MaLR 13 467 0 1867 163 0 27 chr10 33400101 33400402 -106916363 + AluJo SINE Alu 1 293 -19 380 282 155 0 chr10 33401710 33401884 -106914881 - MER113 DNA MER1_type? -110 411 211 1120 164 23 90 chr10 33401884 33402100 -106914665 - L1MA10 LINE L1 -4 6330 6138 1947 141 17 3 chr10 33402100 33402398 -106914367 - AluSx SINE Alu -10 302 1 1120 164 23 90 chr10 33402398 33402480 -106914285 - L1MA10 LINE L1 -196 6138 6052 2136 148 0 0 chr10 33403738 33404049 -106912716 - AluSx SINE Alu -1 311 1 1674 163 14 24 chr10 33404286 33404580 -106912185 + AluJo SINE Alu 1 291 -21 354 335 43 16 chr10 33405660 33405845 -106910920 + MIR SINE MIR 34 223 -39 251 172 125 16 chr10 33405965 33406029 -106910736 - MIR SINE MIR -100 162 92 345 197 0 0 chr10 33408066 33408142 -106908623 + (CAT)n Simple_repeat Simple_repeat 1 76 0 374 239 176 0 chr10 33408513 33408665 -106908100 - MER5A DNA MER1_type -3 186 4 234 62 0 0 chr10 33409050 33409082 -106907683 + (TC)n Simple_repeat Simple_repeat 1 32 0 410 285 83 0 chr10 33409356 33409500 -106907265 + MER103 DNA DNA 1 156 -10 253 167 0 0 chr10 33409600 33409642 -106907123 - 5S rRNA rRNA -79 42 1 2073 164 43 33 chr10 33410467 33410582 -106906183 - MSTB LTR MaLR 0 426 314 1866 136 57 14 chr10 33410582 33410862 -106905903 + AluSx SINE Alu 1 292 -20 2073 164 43 33 chr10 33410862 33411168 -106905597 - MSTB LTR MaLR -112 314 1 595 221 198 16 chr10 33411676 33411864 -106904901 - MIR SINE MIR 0 262 37 280 0 24 24 chr10 33411925 33411966 -106904799 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2247 112 0 10 chr10 33412043 33412347 -106904418 + AluSg1 SINE Alu 1 301 -8 195 273 80 0 chr10 33413083 33413171 -106903594 + L2 LINE L2 2216 2310 -1004 1726 175 0 13 chr10 33415616 33415930 -106900835 - AluJo SINE Alu -2 310 1 263 241 13 25 chr10 33416527 33416606 -106900159 - MIR3 SINE MIR -24 184 107 249 337 0 10 chr10 33416653 33416751 -106900014 + G-rich Low_complexity Low_complexity 2 98 0 296 285 138 0 chr10 33417876 33417999 -106898766 + MER5B DNA MER1_type 35 174 -4 255 147 73 0 chr10 33418071 33418139 -106898626 + A-rich Low_complexity Low_complexity 5 77 0 770 181 0 0 chr10 33418146 33418273 -106898492 + FRAM SINE Alu 20 146 -30 473 0 18 0 chr10 33418277 33418334 -106898431 + (TAA)n Simple_repeat Simple_repeat 3 60 0 187 281 22 45 chr10 33418534 33418623 -106898142 + L2 LINE L2 3005 3091 -181 431 268 108 0 chr10 33418817 33418974 -106897791 + MER5B DNA MER1_type 1 174 -4 2997 122 16 0 chr10 33419079 33419520 -106897245 - L1PB3 LINE L1 -4 6150 5703 302 335 60 32 chr10 33419962 33420180 -106896585 + MLT1K LTR MaLR 252 475 -113 2154 100 0 0 chr10 33420966 33421256 -106895509 + AluSq SINE Alu 7 296 -17 628 213 12 71 chr10 33421863 33422032 -106894733 + MIR SINE MIR 83 241 -21 180 0 0 0 chr10 33422103 33422123 -106894642 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1544 156 26 4 chr10 33422125 33422394 -106894371 - AluJo SINE Alu -25 287 13 243 337 59 10 chr10 33423448 33423549 -106893216 - L2 LINE L2 -20 3252 3147 319 291 56 11 chr10 33423662 33423785 -106892980 - MIR SINE MIR -50 158 33 2188 94 0 25 chr10 33430745 33431063 -106885702 + AluSx SINE Alu 1 310 -2 269 259 86 61 chr10 33431479 33431676 -106885089 - MER112 DNA MER1_type -33 227 26 5027 89 97 28 chr10 33431863 33433126 -106883639 + L1PA13 LINE L1 4834 6160 -3 254 343 10 20 chr10 33433128 33433230 -106883535 - MIR SINE MIR -157 105 5 1905 112 31 3 chr10 33433247 33433541 -106883224 + AluSx SINE Alu 1 302 -10 924 278 85 20 chr10 33433755 33434155 -106882610 - L1MC4a LINE L1 -1816 5992 5567 21 71 0 0 chr10 33434751 33434793 -106881972 + AT_rich Low_complexity Low_complexity 1 42 0 401 296 49 35 chr10 33435969 33436111 -106880654 - L2 LINE L2 -1 3271 3128 21 0 0 0 chr10 33436330 33436351 -106880414 + AT_rich Low_complexity Low_complexity 1 21 0 2041 114 0 25 chr10 33436360 33436676 -106880089 + AluSg SINE Alu 1 308 -2 359 295 156 6 chr10 33436824 33436997 -106879768 - MIR SINE MIR 0 262 64 2014 53 43 66 chr10 33437357 33437661 -106879104 + AluY SINE Alu 1 297 -14 23 0 0 0 chr10 33439002 33439025 -106877740 + AT_rich Low_complexity Low_complexity 1 23 0 4265 173 94 18 chr10 33441249 33442760 -106874005 + MER52A LTR ERV1 66 1755 0 199 318 36 82 chr10 33445461 33445571 -106871194 + L2 LINE L2 3103 3207 -65 1113 247 57 13 chr10 33446195 33446511 -106870254 - MER46C DNA MER2_type 0 338 9 1611 145 7 25 chr10 33446584 33446866 -106869899 + AluSq SINE Alu 1 277 -36 1515 155 12 16 chr10 33448011 33448269 -106868496 - AluSq SINE Alu -56 257 1 1469 189 3 34 chr10 33449027 33449349 -106867416 + AluJo SINE Alu 1 312 0 286 278 35 70 chr10 33449627 33449705 -106867060 - MIR SINE MIR -58 150 76 2029 191 6 3 chr10 33449705 33450066 -106866699 - MLT1A1 LTR MaLR 0 365 4 286 278 35 70 chr10 33450066 33450102 -106866663 - MIR SINE MIR -132 76 40 1721 161 140 42 chr10 33450284 33450670 -106866095 + MSTC LTR MaLR 1 424 -4 463 215 0 21 chr10 33450992 33451136 -106865629 + GA-rich Low_complexity Low_complexity 2 142 0 2125 82 33 23 chr10 33451306 33451610 -106865155 - AluSp SINE Alu -6 307 1 714 281 102 57 chr10 33452401 33452817 -106863948 + L2 LINE L2 2714 3110 -203 1970 125 7 0 chr10 33452817 33453097 -106863668 + AluSx SINE Alu 1 282 -30 195 100 0 0 chr10 33453098 33453128 -106863637 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 714 281 102 57 chr10 33453128 33453140 -106863625 + L2 LINE L2 3110 3120 -193 2206 62 21 3 chr10 33453140 33453428 -106863337 + AluY SINE Alu 1 293 -18 714 281 102 57 chr10 33453428 33453556 -106863209 + L2 LINE L2 3120 3305 -8 271 267 107 23 chr10 33454732 33454863 -106861902 + L1MC/D LINE L1 5722 5863 -1945 302 194 15 15 chr10 33455044 33455111 -106861654 + L2 LINE L2 3205 3271 -1 332 318 119 13 chr10 33456031 33456182 -106860583 - MIR SINE MIR -16 246 80 21 36 0 0 chr10 33456297 33456325 -106860440 + AT_rich Low_complexity Low_complexity 1 28 0 2145 113 7 0 chr10 33456354 33456654 -106860111 - AluSx SINE Alu -10 302 1 218 300 0 0 chr10 33457611 33457671 -106859094 - L2 LINE L2 -10 3303 3244 242 301 48 0 chr10 33458101 33458184 -106858581 - MIR SINE MIR -30 232 146 1671 156 14 3 chr10 33458189 33458477 -106858288 - AluJb SINE Alu -21 291 1 188 309 49 37 chr10 33458501 33458582 -106858183 - MIR SINE MIR -180 82 1 522 278 106 24 chr10 33458620 33458851 -106857914 + MIR SINE MIR 16 256 -6 3166 146 99 15 chr10 33459026 33459622 -106857143 + MER39B LTR ERV1 6 651 -2 1691 181 35 44 chr10 33460173 33460511 -106856254 + MER2 DNA MER2_type 1 335 -10 1667 183 3 13 chr10 33461392 33461704 -106855061 - AluJo SINE Alu -3 309 1 454 297 153 36 chr10 33463487 33463736 -106853029 + L2 LINE L2 3035 3312 -1 229 239 184 16 chr10 33464029 33464159 -106852606 - MIR SINE MIR -89 119 5 185 326 0 0 chr10 33464185 33464231 -106852534 + L2 LINE L2 3122 3167 -105 24 0 0 0 chr10 33464573 33464597 -106852168 + AT_rich Low_complexity Low_complexity 1 24 0 240 253 13 76 chr10 33464905 33464984 -106851781 + MIR3 SINE MIR 87 160 -48 3229 200 76 75 chr10 33464985 33465652 -106851113 + Charlie1 DNA MER1_type 2 667 -2094 2497 69 0 0 chr10 33465652 33465958 -106850807 + AluY SINE Alu 1 306 -5 3229 200 76 75 chr10 33465958 33466699 -106850066 + Charlie1 DNA MER1_type 667 2761 0 24 0 0 0 chr10 33466932 33466956 -106849809 + AT_rich Low_complexity Low_complexity 1 24 0 1365 138 73 4 chr10 33467165 33467440 -106849325 - AluSq SINE Alu -19 294 1 567 167 10 0 chr10 33467606 33467702 -106849063 + Charlie1 DNA MER1_type 2665 2761 0 24 0 0 0 chr10 33467935 33467959 -106848806 + AT_rich Low_complexity Low_complexity 1 24 0 2305 98 0 3 chr10 33468176 33468473 -106848292 - AluSq SINE Alu -17 296 1 2353 99 0 3 chr10 33469193 33469507 -106847258 + AluSq SINE Alu 1 313 0 2862 220 14 24 chr10 33470279 33470937 -106845828 - MER82 DNA MER2_type 0 653 3 247 248 144 32 chr10 33470971 33471096 -106845669 - MIR SINE MIR -109 153 15 2008 114 3 88 chr10 33472216 33472558 -106844207 + AluSq SINE Alu 1 313 0 2401 83 0 0 chr10 33472571 33472873 -106843892 + AluY SINE Alu 1 302 -9 441 0 0 0 chr10 33474217 33474266 -106842499 + (TA)n Simple_repeat Simple_repeat 1 49 0 1866 163 0 3 chr10 33474269 33474552 -106842213 - AluJo SINE Alu -30 282 1 21 0 0 0 chr10 33474606 33474627 -106842138 + AT_rich Low_complexity Low_complexity 1 21 0 186 103 0 0 chr10 33474648 33474677 -106842088 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 52 82 0 0 chr10 33474848 33474970 -106841795 + AT_rich Low_complexity Low_complexity 1 122 0 253 270 16 16 chr10 33474977 33475040 -106841725 + MIR SINE MIR 48 110 -152 442 293 102 18 chr10 33475437 33475604 -106841161 - MIR3 SINE MIR -21 187 7 497 302 88 44 chr10 33476034 33476239 -106840526 - MIR SINE MIR -19 243 30 21 36 0 0 chr10 33476570 33476598 -106840167 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr10 33476969 33476998 -106839767 + AT_rich Low_complexity Low_complexity 1 29 0 227 250 103 52 chr10 33477715 33477831 -106838934 + L1ME4a LINE L1 5968 6089 -32 27 29 0 0 chr10 33477974 33478008 -106838757 + AT_rich Low_complexity Low_complexity 1 34 0 759 202 6 23 chr10 33478038 33478154 -106838611 + L1ME1 LINE L1 36 150 -6246 2727 180 223 56 chr10 33478154 33479027 -106837738 + LTR28 LTR ERV1 2 1020 0 759 202 6 23 chr10 33479027 33479083 -106837682 + L1ME1 LINE L1 150 205 -6191 2877 251 91 16 chr10 33479134 33480230 -106836535 + L1ME1 LINE L1 349 1527 -4869 2398 102 0 0 chr10 33480251 33480564 -106836201 + AluSp SINE Alu 1 313 0 1431 252 62 33 chr10 33480635 33482975 -106833790 + L1ME1 LINE L1 3588 6228 -7 422 293 121 39 chr10 33483167 33483498 -106833267 + L1ME LINE L1 5318 5675 -446 23 48 0 48 chr10 33483592 33483655 -106833110 + AT_rich Low_complexity Low_complexity 1 60 0 1271 166 32 108 chr10 33483692 33484006 -106832759 + AluJb SINE Alu 2 291 -11 23 78 0 0 chr10 33484346 33484397 -106832368 + AT_rich Low_complexity Low_complexity 1 51 0 281 239 252 32 chr10 33485564 33485719 -106831046 - MIR SINE MIR -27 235 47 749 293 48 26 chr10 33485898 33486171 -106830594 + L3 LINE CR1 1136 1414 -163 2250 136 14 8 chr10 33486526 33486887 -106829878 - MER47A DNA MER2_type 0 366 4 276 145 174 29 chr10 33486934 33487003 -106829762 - L1ME1 LINE L1 -6 6160 6082 2286 204 63 25 chr10 33487006 33487484 -106829281 + MER74B LTR ERVL 43 546 -76 2153 72 0 56 chr10 33487484 33487790 -106828975 - AluSg SINE Alu -21 289 1 2286 204 63 25 chr10 33487790 33487870 -106828895 + MER74B LTR ERVL 546 622 0 1291 243 146 30 chr10 33487870 33488343 -106828422 - L1ME1 LINE L1 -96 6070 5543 210 37 0 0 chr10 33488447 33488474 -106828291 + (CA)n Simple_repeat Simple_repeat 2 28 0 4433 108 9 14 chr10 33488474 33489139 -106827626 - L1PA13 LINE L1 -8 6155 5494 201 128 0 51 chr10 33489498 33489537 -106827228 + (TCTCC)n Simple_repeat Simple_repeat 5 41 0 1886 126 19 0 chr10 33489537 33489807 -106826958 - AluSx SINE Alu -36 276 2 291 274 62 62 chr10 33489941 33490087 -106826678 + MIR SINE MIR 67 212 -50 264 59 0 0 chr10 33490186 33490220 -106826545 + (A)n Simple_repeat Simple_repeat 1 34 0 242 297 144 9 chr10 33490653 33490764 -106826001 + L2 LINE L2 2574 2699 -615 658 236 0 12 chr10 33490849 33491014 -106825751 - HAL1 LINE L1 -108 2399 2237 817 283 122 25 chr10 33491065 33491468 -106825297 - HAL1 LINE L1 -953 1554 1113 22 70 0 0 chr10 33491628 33491671 -106825094 + AT_rich Low_complexity Low_complexity 1 43 0 1391 116 116 101 chr10 33492260 33492588 -106824177 - MER44D DNA MER2_type -6 603 1 715 291 143 9 chr10 33492893 33493243 -106823522 - L1MC4a LINE L1 -1895 5913 5517 585 268 89 5 chr10 33495335 33495525 -106821240 + Tigger8 DNA MER2_type 68 273 -393 4740 152 26 43 chr10 33495569 33496123 -106820642 + L1MB2 LINE L1 5098 5625 -546 2210 92 20 3 chr10 33496123 33496426 -106820339 + AluY SINE Alu 1 308 -3 4740 152 26 43 chr10 33496426 33496954 -106819811 + L1MB2 LINE L1 5625 6160 -11 576 291 39 57 chr10 33496954 33497339 -106819426 + Tigger8 DNA MER2_type 278 655 -11 23 54 0 0 chr10 33498079 33498116 -106818649 + AT_rich Low_complexity Low_complexity 1 37 0 233 297 207 0 chr10 33498428 33498573 -106818192 + L1ME4a LINE L1 5843 6017 -104 280 263 30 0 chr10 33498607 33498706 -106818059 + (TA)n Simple_repeat Simple_repeat 1 102 0 215 378 67 0 chr10 33499201 33499291 -106817474 + L2 LINE L2 3133 3228 -44 1148 236 46 0 chr10 33500109 33500393 -106816372 - MER58B DNA MER1_type 0 341 45 205 220 102 17 chr10 33500415 33500474 -106816291 + MIR SINE MIR 30 93 -169 809 289 23 5 chr10 33500600 33500818 -106815947 - MIR SINE MIR -6 256 35 939 59 0 0 chr10 33501422 33501541 -106815224 - pTR5 LTR ERV1 -2046 392 274 7417 109 115 79 chr10 33501546 33503457 -106813308 - pTR5 LTR ERV1 0 2438 17 557 346 97 30 chr10 33504389 33505167 -106811598 + L2 LINE L2 2420 3245 -27 229 178 0 0 chr10 33505169 33505214 -106811551 - L1MB7 LINE L1 -20 6164 6120 10037 193 58 37 chr10 33505253 33507078 -106809687 - L1M4 LINE L1 -551 5627 3715 2026 147 0 0 chr10 33507078 33507377 -106809388 - AluSq SINE Alu -13 300 2 10037 193 58 37 chr10 33507377 33508501 -106808264 - L1M4 LINE L1 -2463 3715 2616 605 323 137 43 chr10 33511784 33512689 -106804076 + L2 LINE L2 1298 2287 -1027 521 278 40 7 chr10 33512715 33512866 -106803899 + MIR SINE MIR 2 157 -105 603 353 76 32 chr10 33512899 33513684 -106803081 + L2 LINE L2 2295 3118 -154 1863 189 91 67 chr10 33514186 33514737 -106802028 + L1MD2 LINE L1 5794 6357 -2 21 36 0 0 chr10 33514924 33514952 -106801813 + AT_rich Low_complexity Low_complexity 1 28 0 270 257 233 29 chr10 33516796 33517041 -106799724 - L1ME LINE L1 -371 5793 5499 2117 217 100 55 chr10 33517096 33518604 -106798161 - L1ME2 LINE L1 -10 6154 4406 1224 168 0 0 chr10 33519714 33519916 -106796849 - AluSg/x SINE Alu 0 310 109 27 29 0 0 chr10 33521417 33521451 -106795314 + AT_rich Low_complexity Low_complexity 1 34 0 233 235 176 42 chr10 33521549 33521668 -106795097 - HAL1b LINE L1 -896 452 318 1066 254 233 16 chr10 33521829 33522388 -106794377 + Charlie2b DNA MER1_type 4 683 -2099 1873 214 83 13 chr10 33522446 33522656 -106794109 + Charlie2a DNA MER1_type 1471 1665 -1197 2256 113 0 3 chr10 33522656 33522965 -106793800 + AluSq SINE Alu 1 308 -5 1873 214 83 13 chr10 33522965 33523283 -106793482 + Charlie2a DNA MER1_type 1665 2036 -826 324 169 0 0 chr10 33523310 33523375 -106793390 - Charlie2 DNA MER1_type -131 2731 2667 368 241 64 97 chr10 33523517 33523828 -106792937 - L1ME LINE L1 -1102 5044 4744 1636 196 153 12 chr10 33524195 33524277 -106792488 + L1MD3 LINE L1 7415 7484 -511 2474 152 50 7 chr10 33524277 33524719 -106792046 - LOR1b LTR ERV1 0 461 1 1636 196 153 12 chr10 33524719 33525054 -106791711 + L1MD3 LINE L1 7484 7891 -104 469 299 25 70 chr10 33525070 33525384 -106791381 - L1ME2 LINE L1 -1769 4377 4078 743 202 55 37 chr10 33526184 33526402 -106790363 + L1ME2 LINE L1 5943 6164 0 2110 116 38 0 chr10 33526492 33526785 -106789980 + AluSg SINE Alu 1 304 -6 277 346 0 0 chr10 33527140 33527244 -106789521 + MER94 DNA DNA 1 104 -30 363 305 68 17 chr10 33527805 33527923 -106788842 + MIR SINE MIR 21 144 -64 22 0 0 0 chr10 33528584 33528606 -106788159 + AT_rich Low_complexity Low_complexity 1 22 0 284 300 80 20 chr10 33528814 33529014 -106787751 - HAL1 LINE L1 -1989 518 307 533 169 0 0 chr10 33529217 33529300 -106787465 + AluY SINE Alu 1 83 -227 4684 117 62 47 chr10 33529300 33530110 -106786655 - LTR12 LTR ERV1 0 826 5 1804 176 98 54 chr10 33530126 33530700 -106786065 - pTR5 LTR ERV1 -1094 1344 746 1546 108 8 38 chr10 33530700 33530940 -106785825 + AluSc SINE Alu 77 309 0 770 241 101 31 chr10 33531262 33531548 -106785217 + MLT1K LTR MaLR 283 588 0 243 180 20 0 chr10 33532249 33532299 -106784466 - Charlie8 DNA MER1_type -14 2403 2353 429 276 184 39 chr10 33532325 33532492 -106784273 - Charlie8 DNA MER1_type -1772 645 504 684 236 66 62 chr10 33532492 33532751 -106784014 - MIR SINE MIR 0 262 3 429 276 184 39 chr10 33532751 33532772 -106783993 - Charlie8 DNA MER1_type -1913 504 487 1944 194 59 11 chr10 33532772 33533216 -106783549 + MLT1C LTR MaLR 2 466 -1 429 276 184 39 chr10 33533216 33533487 -106783278 - Charlie8 DNA MER1_type -1930 487 118 863 210 13 0 chr10 33533564 33533721 -106783044 + AluJo SINE Alu 123 281 -31 28 0 0 0 chr10 33533722 33533750 -106783015 + AT_rich Low_complexity Low_complexity 1 28 0 2614 64 0 0 chr10 33533969 33534280 -106782485 + AluY SINE Alu 1 311 0 432 228 89 24 chr10 33535212 33535335 -106781430 - MIR SINE MIR -67 195 65 1973 132 93 39 chr10 33535337 33535719 -106781046 - MSTB1 LTR MaLR 0 432 25 2269 136 27 8 chr10 33535719 33536087 -106780678 - THE1C LTR MaLR 0 375 1 1973 132 93 39 chr10 33536087 33536112 -106780653 - MSTB1 LTR MaLR -407 25 3 240 264 359 0 chr10 33536219 33536378 -106780387 + MIR SINE MIR 37 252 -10 2210 103 3 0 chr10 33536496 33536786 -106779979 + AluSx SINE Alu 1 291 -21 377 306 24 18 chr10 33538067 33538237 -106778528 - MER5B DNA MER1_type -4 174 4 2359 88 7 0 chr10 33538386 33538680 -106778085 - AluSq SINE Alu -17 296 1 2172 103 0 4 chr10 33538882 33539198 -106777567 - AluSc SINE Alu 0 315 1 198 284 37 73 chr10 33539199 33539308 -106777457 + L2 LINE L2 3168 3272 0 273 338 97 43 chr10 33540290 33540681 -106776084 - L2 LINE L2 -36 3277 2866 2014 131 0 0 chr10 33541164 33541476 -106775289 - AluSx SINE Alu 0 312 1 239 298 0 0 chr10 33543459 33543516 -106773249 + GA-rich Low_complexity Low_complexity 1 57 0 315 0 0 0 chr10 33543964 33543999 -106772766 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 241 287 40 0 chr10 33544715 33544816 -106771949 - L1MEc LINE L1 -2637 3578 3474 567 192 90 4 chr10 33544901 33545135 -106771630 - L1MEc LINE L1 -2732 3483 3230 * 973 225 22 44 chr10 33545132 33545496 -106771269 - L1MEc LINE L1 -3519 2696 2341 6303 17 9 3 chr10 33545511 33546276 -106770489 - L1PA2 LINE L1 0 6155 5386 3219 35 0 0 chr10 33546270 33546694 -106770071 + L1PA2 LINE L1 4963 5386 -760 * 1219 244 51 18 chr10 33546696 33547147 -106769618 - L1MEc LINE L1 -4006 2390 1925 914 307 18 18 chr10 33547147 33547473 -106769292 + MLT1H1 LTR MaLR 230 555 0 4782 49 21 0 chr10 33547514 33548142 -106768623 - L1PA2 LINE L1 -5502 644 4 * 35236 34 24 2 chr10 33548141 33553515 -106763250 + L1PA2 LINE L1 654 6150 -5 450 235 13 13 chr10 33553533 33553682 -106763083 + L1M4 LINE L1 2272 2420 -3726 504 42 0 0 chr10 33553682 33553754 -106763011 + L1PA2 LINE L1 6084 6155 0 2087 119 7 3 chr10 33553966 33554260 -106762505 + AluSg SINE Alu 1 295 -15 1376 289 92 4 chr10 33555395 33555896 -106760869 + MLT1H1 LTR MaLR 1 545 -10 1504 211 7 10 chr10 33556197 33556505 -106760260 + AluY SINE Alu 5 311 0 284 317 188 41 chr10 33557278 33557672 -106759093 + L2 LINE L2 2819 3270 -2 642 85 57 0 chr10 33558493 33558599 -106758166 + L1 LINE L1 4640 4751 -1395 629 251 55 0 chr10 33558652 33558835 -106757930 + L1M2 LINE L1 3413 3605 -2541 2708 152 46 17 chr10 33558843 33559804 -106756961 + L1M2 LINE L1 4753 5754 -546 745 221 183 53 chr10 33560249 33560469 -106756296 - L2 LINE L2 -2 3311 3121 2614 58 0 3 chr10 33560469 33560780 -106755985 + AluY SINE Alu 1 310 -1 745 221 183 53 chr10 33560780 33561137 -106755628 - L2 LINE L2 -192 3121 2653 736 321 0 20 chr10 33561969 33562274 -106754491 - AluJo SINE Alu 0 312 14 1584 228 42 20 chr10 33562585 33563042 -106753723 - L1ME1 LINE L1 -89 6313 5847 1134 228 56 44 chr10 33563057 33563389 -106753376 + MLT2D LTR ERVL 15 354 -60 2401 50 0 33 chr10 33563389 33563690 -106753075 + AluY SINE Alu 1 291 -20 1134 228 56 44 chr10 33563690 33563747 -106753018 + MLT2D LTR ERVL 354 409 -5 2409 221 41 16 chr10 33563747 33564652 -106752113 - L1ME1 LINE L1 -549 5853 4927 22 0 0 0 chr10 33564732 33564754 -106752011 + AT_rich Low_complexity Low_complexity 1 22 0 385 235 0 59 chr10 33564860 33564962 -106751803 - L2 LINE L2 -3 3269 3174 570 39 0 0 chr10 33565105 33565183 -106751582 + L1HS LINE L1 6078 6155 0 37 39 0 0 chr10 33565183 33565234 -106751531 + AT_rich Low_complexity Low_complexity 1 51 0 1051 158 0 0 chr10 33565234 33565392 -106751373 - FAM SINE Alu -17 158 1 2348 102 0 3 chr10 33565537 33565842 -106750923 + AluSx SINE Alu 1 304 -8 2547 55 6 10 chr10 33566515 33566827 -106749938 - AluY SINE Alu 0 311 1 1299 278 108 11 chr10 33567010 33567568 -106749197 - MLT1L LTR MaLR 0 615 4 234 338 41 28 chr10 33567686 33567831 -106748934 + L2 LINE L2 1776 1922 -1392 2815 228 83 33 chr10 33567856 33569327 -106747438 - L1ME1 LINE L1 -2975 3407 1885 1626 255 11 25 chr10 33569480 33570010 -106746755 - L1ME1 LINE L1 -4550 1834 1312 1755 193 0 13 chr10 33570031 33570337 -106746428 - AluJb SINE Alu -10 302 1 1449 174 59 51 chr10 33570388 33570744 -106746021 - MSTC LTR MaLR 0 428 70 23 0 0 0 chr10 33571001 33571024 -106745741 + AT_rich Low_complexity Low_complexity 1 23 0 2333 99 16 0 chr10 33571303 33571606 -106745159 + AluSq SINE Alu 1 308 -5 1953 106 31 31 chr10 33571780 33572073 -106744692 + AluSg SINE Alu 1 293 -17 5558 103 43 10 chr10 33573020 33574118 -106742647 + L1PA16 LINE L1 5018 6157 -9 1702 159 11 7 chr10 33574257 33574534 -106742231 + AluJo SINE Alu 21 298 -14 2344 113 0 0 chr10 33574577 33574886 -106741879 + AluY SINE Alu 1 309 -2 219 286 0 0 chr10 33574886 33574935 -106741830 - L2 LINE L2 -31 3241 3193 2458 78 7 0 chr10 33576623 33576930 -106739835 - AluSp SINE Alu -4 309 1 453 36 0 0 chr10 33578294 33578349 -106738416 + (CA)n Simple_repeat Simple_repeat 2 56 0 244 236 231 21 chr10 33578552 33578715 -106738050 - MIR SINE MIR 0 262 51 267 327 40 20 chr10 33579376 33579477 -106737288 + MIR SINE MIR 160 262 0 21 0 0 0 chr10 33579754 33579775 -106736990 + AT_rich Low_complexity Low_complexity 1 21 0 2413 84 0 0 chr10 33580158 33580457 -106736308 - AluY SINE Alu -12 299 1 273 29 0 0 chr10 33581141 33581175 -106735590 + (CAT)n Simple_repeat Simple_repeat 2 35 0 220 320 144 16 chr10 33581443 33581568 -106735197 + L2 LINE L2 3168 3308 -5 187 200 110 50 chr10 33581607 33581707 -106735058 + L2 LINE L2 3200 3305 -8 1609 199 31 0 chr10 33582386 33582672 -106734093 + AluJo SINE Alu 1 295 -17 382 332 98 30 chr10 33582956 33583131 -106733634 - MIR3 SINE MIR -12 196 3 21 71 0 0 chr10 33583893 33583935 -106732830 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr10 33584075 33584100 -106732665 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr10 33584228 33584264 -106732501 + AT_rich Low_complexity Low_complexity 1 36 0 214 268 27 18 chr10 33584298 33584410 -106732355 + A-rich Low_complexity Low_complexity 1 113 0 1534 171 50 34 chr10 33584703 33585001 -106731764 + AluJo SINE Alu 1 303 -9 450 274 175 21 chr10 33585548 33585936 -106730829 - MLT1J LTR MaLR -23 462 44 2155 116 3 0 chr10 33585946 33586240 -106730525 + AluSg SINE Alu 1 295 -15 409 284 6 12 chr10 33586684 33586703 -106730062 - L1MA10 LINE L1 0 6334 6316 927 218 17 84 chr10 33586703 33587047 -106729718 - L1ME2 LINE L1 -11 6153 5833 1159 104 35 0 chr10 33587048 33587221 -106729544 - Tigger1 DNA MER2_type -1265 1153 975 1818 136 20 0 chr10 33587235 33587529 -106729236 + Tigger1 DNA MER2_type 1152 1451 -967 2403 106 0 0 chr10 33587529 33587886 -106728879 + L1P LINE L1 4514 4870 -1276 913 61 46 0 chr10 33587891 33588022 -106728743 - L1P LINE L1 -3514 2632 2496 288 264 94 19 chr10 33588023 33588129 -106728636 - L3 LINE CR1 -206 1371 1258 1633 285 158 26 chr10 33588318 33589059 -106727706 - L2 LINE L2 -401 2913 2075 367 187 201 45 chr10 33589730 33589839 -106726926 + MIR SINE MIR 108 243 -19 2243 94 3 10 chr10 33589839 33590136 -106726629 + AluSg SINE Alu 1 295 -15 367 187 201 45 chr10 33590136 33590160 -106726605 + MIR SINE MIR 243 262 0 2457 87 0 0 chr10 33590333 33590644 -106726121 - AluY SINE Alu 0 311 1 2182 142 132 5 chr10 33591546 33591926 -106724839 - MSTA LTR MaLR 0 428 1 25 0 0 0 chr10 33592027 33592052 -106724713 + AT_rich Low_complexity Low_complexity 1 25 0 1022 195 30 26 chr10 33592114 33592381 -106724384 - L1MD3 LINE L1 -2 7993 7726 2154 212 77 45 chr10 33593992 33594197 -106722568 + MER82 DNA MER2_type 3 200 -453 1703 176 64 9 chr10 33594197 33594526 -106722239 + MER7A DNA MER2_type 2 346 0 2154 212 77 45 chr10 33594526 33594896 -106721869 + MER82 DNA MER2_type 200 602 -51 1058 151 40 104 chr10 33594896 33595147 -106721618 - MER46A DNA MER2_type -1 235 1 2154 212 77 45 chr10 33595147 33595193 -106721572 + MER82 DNA MER2_type 602 645 -8 926 216 0 0 chr10 33595485 33595647 -106721118 + AluJb SINE Alu 137 298 -14 1461 156 53 113 chr10 33595822 33596219 -106720546 + MLT1A2 LTR MaLR 2 374 0 824 197 85 64 chr10 33596242 33596632 -106720133 - MER114 LTR ERV -250 398 1 225 35 0 0 chr10 33596794 33596823 -106719942 - MLT2B2 LTR ERVL -2 513 485 1976 198 49 11 chr10 33597139 33597584 -106719181 + MLT2C2 LTR ERVL 1 462 -2 245 293 104 19 chr10 33597797 33597903 -106718862 + L2 LINE L2 3153 3267 -5 259 244 0 87 chr10 33598154 33598269 -106718496 + L1MC4a LINE L1 6559 6663 -1145 991 195 48 78 chr10 33598306 33598701 -106718064 + L1MC5 LINE L1 6857 7239 -722 688 266 0 30 chr10 33598722 33598891 -106717874 + MER5A DNA MER1_type 14 177 -12 589 272 19 14 chr10 33598913 33599126 -106717639 + L1MC5 LINE L1 7295 7508 -453 2108 273 29 65 chr10 33599206 33599973 -106716792 + L1M4b LINE L1 11 749 -6110 428 167 217 8 chr10 33600413 33600533 -106716232 + MSTC LTR MaLR 284 428 0 5714 241 35 45 chr10 33600535 33600725 -106716040 + MSTC-int LTR MaLR 2 192 -1543 2168 124 7 0 chr10 33600725 33601024 -106715741 - AluSx SINE Alu -11 301 1 5714 241 35 45 chr10 33601024 33602507 -106714258 + MSTC-int LTR MaLR 192 1658 -77 265 330 137 52 chr10 33602762 33602995 -106713770 + L2 LINE L2 2181 2433 -881 417 263 263 7 chr10 33603039 33603176 -106713589 + MER5A DNA MER1_type 18 189 0 185 305 182 45 chr10 33603181 33603335 -106713430 + L2 LINE L2 2465 2639 -675 202 333 0 0 chr10 33603561 33603621 -106713144 + L2 LINE L2 2695 2754 -560 226 239 277 8 chr10 33605797 33605927 -106710838 + MER20B DNA MER1_type 25 189 -594 775 276 86 0 chr10 33606369 33606579 -106710186 + L2 LINE L2 2550 2777 -537 523 278 199 50 chr10 33606624 33606779 -106709986 - L2 LINE L2 -905 2409 2278 1112 196 5 14 chr10 33606779 33606999 -106709766 + MER20 DNA MER1_type 2 219 0 523 278 199 50 chr10 33606999 33607246 -106709519 - L2 LINE L2 -1036 2278 1947 237 345 97 0 chr10 33607419 33607564 -106709201 - L2 LINE L2 -2222 1092 934 2736 175 56 79 chr10 33607687 33608494 -106708271 + L1MA9 LINE L1 5487 6274 -38 401 209 23 12 chr10 33608623 33608709 -106708056 + MIR SINE MIR 48 134 -128 1205 196 56 116 chr10 33608720 33608801 -106707964 + MLT1D LTR MaLR 1 85 -420 4019 181 79 11 chr10 33608801 33609608 -106707157 + MER21B LTR ERV1 1 862 -1 1205 196 56 116 chr10 33609608 33609998 -106706767 + MLT1D LTR MaLR 85 439 -66 2379 86 0 13 chr10 33609998 33610312 -106706453 - AluSg SINE Alu 0 310 1 1205 196 56 116 chr10 33610312 33610376 -106706389 + MLT1D LTR MaLR 439 505 0 268 301 24 24 chr10 33610393 33610476 -106706289 + MIR SINE MIR 162 244 -18 483 305 21 14 chr10 33610560 33610701 -106706064 + MIR3 SINE MIR 61 202 -6 4288 154 56 11 chr10 33611009 33611935 -106704830 - L1MB7 LINE L1 -9 6175 5209 2326 98 0 10 chr10 33612572 33612877 -106703888 - AluSg SINE Alu -6 304 3 1217 218 4 30 chr10 33613337 33613599 -106703166 + AluJo SINE Alu 1 255 -57 193 257 150 62 chr10 33614049 33614162 -106702603 - L2 LINE L2 -14 3299 3177 1717 88 13 108 chr10 33614381 33614688 -106702077 + AluSx SINE Alu 35 312 0 1083 182 21 0 chr10 33614725 33614912 -106701853 - MER58A DNA MER1_type 0 224 34 295 276 13 0 chr10 33616698 33616774 -106699991 + Tigger3(Golem) DNA MER2_type 2 78 -2951 2166 122 0 7 chr10 33616775 33617070 -106699695 - AluSq SINE Alu -20 293 1 1750 185 7 3 chr10 33617095 33617392 -106699373 - AluJb SINE Alu -14 298 1 1144 53 0 0 chr10 33617395 33617527 -106699238 - AluY SINE Alu -179 132 1 1193 119 9 55 chr10 33617528 33617747 -106699018 + MSTB1 LTR MaLR 223 431 -1 687 150 0 53 chr10 33619574 33619707 -106697058 + L1PB4 LINE L1 6019 6144 -12 2196 120 3 0 chr10 33619714 33620006 -106696759 + AluSp SINE Alu 1 293 -20 1931 112 0 31 chr10 33621715 33622002 -106694763 - AluSq SINE Alu -11 302 25 330 226 71 0 chr10 33622592 33622676 -106694089 - MIR SINE MIR -10 252 163 2919 167 32 20 chr10 33622679 33622707 -106694058 - L1MA4A LINE L1 -141 6162 6136 645 127 25 17 chr10 33622707 33622825 -106693940 - L1MA4A LINE L1 -4 6299 6181 2919 167 32 20 chr10 33622825 33623382 -106693383 - L1MA4A LINE L1 -167 6136 5570 861 122 8 15 chr10 33623499 33623630 -106693135 - FLAM_C SINE Alu 0 143 14 1792 139 64 39 chr10 33623775 33623913 -106692852 + MSTA LTR MaLR 60 193 -235 1895 129 14 14 chr10 33623913 33624207 -106692558 + AluY SINE Alu 1 294 -17 1792 139 64 39 chr10 33624207 33624427 -106692338 + MSTA LTR MaLR 193 427 -1 1512 115 67 52 chr10 33624428 33624698 -106692067 - Tigger2a DNA MER2_type -160 274 1 2042 135 0 0 chr10 33624762 33625083 -106691682 - AluSx SINE Alu 0 321 1 1810 148 23 0 chr10 33625403 33625707 -106691058 + AluSq SINE Alu 3 313 0 2062 211 82 19 chr10 33625953 33626601 -106690164 + L1M4 LINE L1 2412 3100 -3046 228 331 48 35 chr10 33626697 33626842 -106689923 - L2 LINE L2 -1392 1922 1776 1461 280 109 12 chr10 33626960 33627518 -106689247 + MLT1L LTR MaLR 4 615 0 2242 99 6 10 chr10 33627701 33628013 -106688752 + AluY SINE Alu 1 311 0 1511 201 0 26 chr10 33628271 33628574 -106688191 + AluJo SINE Alu 1 295 -17 369 316 68 63 chr10 33629529 33629719 -106687046 + L2 LINE L2 2924 3114 -158 2623 45 0 7 chr10 33630031 33630339 -106686426 - AluSp SINE Alu -7 306 1 433 236 136 78 chr10 33630400 33630591 -106686174 - Charlie8 DNA MER1_type -2136 281 80 997 198 6 6 chr10 33630592 33630764 -106686001 - Tigger2a DNA MER2_type -1 433 262 1158 113 25 39 chr10 33630765 33630969 -106685796 + MSTA LTR MaLR 1 201 -227 2835 230 30 5 chr10 33631077 33631703 -106685062 - L1MEc LINE L1 -5492 904 263 1435 209 39 26 chr10 33631708 33632015 -106684750 + MLT2C1 LTR ERVL 34 344 -53 360 320 16 24 chr10 33632073 33632198 -106684567 + L2 LINE L2 3181 3304 -9 1664 179 0 27 chr10 33632758 33633054 -106683711 - AluJo SINE Alu -24 288 1 285 311 10 0 chr10 33635204 33635307 -106681458 + L1MC/D LINE L1 5669 5772 -2036 602 250 53 74 chr10 33635333 33635474 -106681291 + MIR SINE MIR 13 148 -114 2220 125 0 0 chr10 33635474 33635771 -106680994 + AluSg SINE Alu 1 297 -13 602 250 53 74 chr10 33635771 33635873 -106680892 + MIR SINE MIR 148 251 -11 2408 72 0 3 chr10 33635879 33636170 -106680595 + AluSc SINE Alu 4 293 -16 1121 146 96 9 chr10 33636170 33636390 -106680375 + MSTA LTR MaLR 189 427 -1 1471 122 67 52 chr10 33636391 33636661 -106680104 - Tigger2a DNA MER2_type -160 274 1 1976 136 4 0 chr10 33636725 33637041 -106679724 - AluSx SINE Alu 0 317 1 2288 102 3 0 chr10 33637362 33637667 -106679098 + AluSq SINE Alu 3 308 -5 230 250 0 0 chr10 33638229 33638293 -106678472 + L1ME LINE L1 5386 5449 -672 264 169 31 31 chr10 33638328 33638393 -106678372 + L1ME LINE L1 5523 5587 -575 728 231 119 61 chr10 33638534 33638578 -106678187 - LTR16A1 LTR ERVL -1 456 416 2305 123 0 0 chr10 33638578 33638888 -106677877 - AluSx SINE Alu -2 310 1 728 231 119 61 chr10 33638888 33639155 -106677610 - LTR16A1 LTR ERVL -41 416 127 355 267 52 17 chr10 33640183 33640299 -106676466 + MIR SINE MIR 52 171 -91 336 301 111 7 chr10 33640337 33640490 -106676275 + MIR SINE MIR 27 195 -67 1294 83 0 0 chr10 33640500 33640669 -106676096 + L1PB1 LINE L1 5781 5949 -202 186 313 0 0 chr10 33640838 33640886 -106675879 + MIR SINE MIR 213 260 -2 577 110 0 24 chr10 33640952 33641034 -106675731 + MADE1 DNA Mariner 1 80 0 2371 106 0 0 chr10 33641048 33641360 -106675405 - AluSx SINE Alu 0 312 1 953 147 0 13 chr10 33641674 33641824 -106674941 - FRAM SINE Alu -23 153 6 323 96 19 0 chr10 33641874 33641926 -106674839 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 4648 63 2 2 chr10 33642600 33643152 -106673613 + L1PA8 LINE L1 5607 6158 -14 617 254 63 26 chr10 33643582 33643771 -106672994 - MIR SINE MIR -40 222 27 295 382 15 8 chr10 33645346 33645477 -106671288 + MER5A DNA MER1_type 21 152 -37 282 342 108 0 chr10 33646193 33646304 -106670461 - MIR3 SINE MIR -52 156 34 411 73 0 0 chr10 33648652 33648707 -106668058 + (TG)n Simple_repeat Simple_repeat 2 56 0 571 135 0 0 chr10 33649303 33649392 -106667373 + L1PB3 LINE L1 6066 6154 0 1722 138 174 22 chr10 33649616 33649934 -106666831 - LTR47A LTR ERVL 0 452 71 1708 204 0 7 chr10 33649934 33650238 -106666527 + AluJo SINE Alu 1 302 -10 1722 138 174 22 chr10 33650238 33650280 -106666485 - LTR47A LTR ERVL -381 71 37 377 162 27 203 chr10 33651094 33651309 -106665456 - LTR45B LTR ERV1 -11 514 324 289 257 19 38 chr10 33651354 33651459 -106665306 - MER72 LTR ERV1 -243 479 377 326 225 28 0 chr10 33651725 33651796 -106664969 + MER117 DNA MER1_type 88 160 -37 594 209 37 37 chr10 33652871 33653005 -106663760 + MIR SINE MIR 7 140 -122 585 213 30 41 chr10 33654227 33654396 -106662369 - MIR SINE MIR -17 245 79 1680 177 4 0 chr10 33654783 33655049 -106661716 + AluSx SINE Alu 1 267 -45 1517 195 61 10 chr10 33655643 33655940 -106660825 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 33656770 33656791 -106659974 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr10 33656979 33657015 -106659750 + AT_rich Low_complexity Low_complexity 1 36 0 306 87 20 101 chr10 33657015 33657164 -106659601 + (TAAAAA)n Simple_repeat Simple_repeat 1 137 0 50 0 0 0 chr10 33657164 33657214 -106659551 + AT_rich Low_complexity Low_complexity 1 50 0 2285 90 7 0 chr10 33657775 33658074 -106658691 - AluSg SINE Alu -9 301 1 430 331 41 14 chr10 33658106 33658396 -106658369 + L1ME LINE L1 5523 5820 -301 1737 144 0 25 chr10 33658409 33658693 -106658072 + AluJo SINE Alu 4 280 -32 578 240 151 0 chr10 33658759 33658951 -106657814 + LTR50 LTR ERVL 4 224 -571 334 325 61 15 chr10 33659055 33659252 -106657513 + LTR50 LTR ERVL 457 662 -133 27 73 0 0 chr10 33659290 33659345 -106657420 + AT_rich Low_complexity Low_complexity 1 55 0 219 338 181 31 chr10 33659681 33659974 -106656791 + L3 LINE CR1 70 406 -1171 229 316 25 0 chr10 33659993 33660072 -106656693 - L2 LINE L2 0 3272 3192 1635 171 10 32 chr10 33661046 33661356 -106655409 + AluJo SINE Alu 1 303 -9 334 330 110 47 chr10 33661851 33661905 -106654860 - L2 LINE L2 0 3313 3264 1295 285 58 25 chr10 33661905 33662354 -106654411 + LTR16B LTR ERVL 1 464 0 334 330 110 47 chr10 33662354 33662599 -106654166 - L2 LINE L2 -49 3264 2995 279 0 0 0 chr10 33663014 33663045 -106653720 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 682 128 30 105 chr10 33663051 33663103 -106653662 - FLAM_C SINE Alu -189 123 69 2265 98 3 3 chr10 33663103 33663400 -106653365 + AluSx SINE Alu 3 299 -13 682 128 30 105 chr10 33663400 33663480 -106653285 - FLAM_C SINE Alu -243 69 1 1474 238 99 16 chr10 33663778 33664316 -106652449 + HsTC2 DNA Tc2 1281 1869 -29 1778 142 42 0 chr10 33664316 33664604 -106652161 + AluSx SINE Alu 3 302 -10 1474 238 99 16 chr10 33664604 33664629 -106652136 + HsTC2 DNA Tc2 1869 1891 -7 372 335 12 6 chr10 33664669 33664839 -106651926 - L1ME LINE L1 -304 5817 5647 387 0 0 0 chr10 33665089 33665132 -106651633 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 182 244 22 0 chr10 33665288 33665333 -106651432 - L2 LINE L2 -566 2748 2703 219 349 101 0 chr10 33665709 33665818 -106650947 + L2 LINE L2 2955 3074 -198 464 277 77 8 chr10 33665891 33666021 -106650744 + MER91C DNA MER1_type 2 140 0 2294 104 0 10 chr10 33666029 33666336 -106650429 - AluSx SINE Alu -8 304 1 351 314 0 0 chr10 33666349 33666435 -106650330 + L2 LINE L2 3136 3221 -51 1585 166 21 25 chr10 33666468 33666822 -106649943 - AluJo SINE Alu 0 353 1 1393 163 12 40 chr10 33667343 33667595 -106649170 + AluJo SINE Alu 11 255 -57 238 258 125 58 chr10 33667742 33667862 -106648903 - MLT1J LTR MaLR -55 456 329 1612 131 0 0 chr10 33668066 33668288 -106648477 + AluSx SINE Alu 1 222 -90 232 188 125 0 chr10 33668363 33668411 -106648354 - MER5A DNA MER1_type -135 54 1 751 191 7 43 chr10 33668416 33668557 -106648208 + AluJo SINE Alu 3 138 -174 234 36 0 0 chr10 33668557 33668585 -106648180 + AluJo SINE Alu 262 289 -13 183 326 129 22 chr10 33669141 33669365 -106647400 + L2 LINE L2 2812 3059 -213 236 77 26 0 chr10 33669528 33669567 -106647198 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2592 53 0 0 chr10 33670613 33670915 -106645850 - AluY SINE Alu -9 302 1 2363 84 0 3 chr10 33671095 33671391 -106645374 - AluSc SINE Alu -14 295 1 21 0 0 0 chr10 33671465 33671486 -106645279 + AT_rich Low_complexity Low_complexity 1 21 0 10874 139 13 25 chr10 33672443 33674021 -106642744 - L1MA4A LINE L1 -5 6298 4702 2158 132 3 6 chr10 33674021 33674332 -106642433 + AluSq SINE Alu 1 310 -3 10874 139 13 25 chr10 33674332 33675469 -106641296 - L1MA4A LINE L1 -1601 4702 3552 2077 96 0 11 chr10 33675469 33675741 -106641024 - AluSc SINE Alu -40 269 1 10874 139 13 25 chr10 33675741 33676023 -106640742 - L1MA4A LINE L1 -2751 3552 3340 1866 94 3 118 chr10 33676023 33676363 -106640402 - AluSg SINE Alu -9 301 1 10874 139 13 25 chr10 33676363 33676450 -106640315 - L1MA4A LINE L1 -2963 3340 3253 4897 133 16 33 chr10 33676776 33677689 -106639076 - pTR5 LTR ERV1 -797 1641 744 1414 161 18 37 chr10 33677690 33677963 -106638802 + THE1B LTR MaLR 97 364 0 462 138 12 0 chr10 33678456 33678536 -106638229 + L1PA16 LINE L1 6070 6150 -16 1535 167 29 40 chr10 33678553 33678898 -106637867 + AluJo SINE Alu 13 354 0 1854 131 4 0 chr10 33678954 33679222 -106637543 - AluSx SINE Alu -9 303 35 23 0 0 0 chr10 33679696 33679719 -106637046 + AT_rich Low_complexity Low_complexity 1 23 0 609 240 86 27 chr10 33679865 33680113 -106636652 + MLT1I LTR MaLR 72 299 -110 1120 286 70 25 chr10 33680163 33680603 -106636162 - LTR40c LTR ERVL -5 460 1 284 219 114 29 chr10 33680603 33680678 -106636087 + MLT1J2 LTR MaLR 334 417 -33 240 273 86 0 chr10 33680719 33680847 -106635918 - L1 LINE L1 -1828 4318 4180 925 262 81 20 chr10 33680943 33681241 -106635524 + LTR50 LTR ERVL 1 316 -479 1013 208 123 7 chr10 33681285 33681554 -106635211 + LTR50 LTR ERVL 496 795 0 273 259 68 14 chr10 33681634 33681781 -106634984 - L1 LINE L1 -2188 3958 3804 222 287 7 28 chr10 33681830 33681973 -106634792 + (TA)n Simple_repeat Simple_repeat 1 140 0 187 274 20 0 chr10 33682173 33682224 -106634541 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr10 33683708 33683728 -106633037 + (TG)n Simple_repeat Simple_repeat 2 21 0 2306 78 7 26 chr10 33683770 33684079 -106632686 - AluSx SINE Alu -9 303 1 1003 92 7 0 chr10 33684245 33684386 -106632379 - L1P2 LINE L1 -495 5660 5519 * 6211 36 8 5 chr10 33684380 33685256 -106631509 + L1P2 LINE L1 4618 5492 -663 4105 203 31 10 chr10 33685241 33686331 -106630434 + L1MB3 LINE L1 4364 5484 -699 * 723 100 0 0 chr10 33686331 33686431 -106630334 + L1PA13 LINE L1 6045 6144 -19 4105 203 31 10 chr10 33686431 33686627 -106630138 + L1MB3 LINE L1 5484 5674 -509 * 6001 100 6 1 chr10 33686624 33687473 -106629292 + L1PA13 LINE L1 5310 6162 -1 2000 189 0 13 chr10 33687469 33687850 -106628915 + L1MB3 LINE L1 5661 6036 -147 * 3226 121 22 39 chr10 33687849 33688912 -106627853 + L1PA16 LINE L1 4953 6157 -9 687 181 25 38 chr10 33688923 33689083 -106627682 + L1MB3 LINE L1 6018 6175 -8 2375 83 0 3 chr10 33689095 33689407 -106627358 - AluY SINE Alu 0 311 1 1131 239 111 17 chr10 33690248 33690545 -106626220 + MER69B DNA AcHobo 1 325 -901 1580 204 74 54 chr10 33690573 33691116 -106625649 + MER69B DNA AcHobo 478 1098 -128 261 0 0 0 chr10 33691116 33691145 -106625620 + (TTG)n Simple_repeat Simple_repeat 2 30 0 762 176 0 0 chr10 33691147 33691272 -106625493 - FRAM SINE Alu -30 146 22 657 181 0 0 chr10 33691276 33691403 -106625362 + MER69B DNA AcHobo 1098 1224 -2 432 0 0 0 chr10 33692081 33692129 -106624636 + (TG)n Simple_repeat Simple_repeat 1 48 0 225 0 0 0 chr10 33692128 33692153 -106624612 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 183 211 96 0 chr10 33693003 33693055 -106623710 - MIR SINE MIR -122 140 84 210 206 98 76 chr10 33693113 33693205 -106623560 + MIR SINE MIR 124 217 -45 2145 240 246 19 chr10 33693327 33693744 -106623021 + L2 LINE L2 1747 2068 -1246 12196 44 3 3 chr10 33693744 33696029 -106620736 - L1PA5 LINE L1 0 6154 3874 2145 240 246 19 chr10 33696029 33696549 -106620216 + L2 LINE L2 2068 2897 -417 587 289 114 0 chr10 33696582 33696810 -106619955 + L2 LINE L2 3017 3270 -43 34 55 0 0 chr10 33697264 33697319 -106619446 + AT_rich Low_complexity Low_complexity 1 55 0 270 164 0 0 chr10 33697415 33697470 -106619295 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1500 184 7 31 chr10 33697471 33697765 -106619000 - AluJo SINE Alu -25 287 1 588 276 71 20 chr10 33699664 33699860 -106616905 - MIR SINE MIR -51 211 6 671 318 181 12 chr10 33700373 33700897 -106615868 + L2 LINE L2 2551 3212 -101 1818 206 101 15 chr10 33700897 33701362 -106615403 - MLT1D LTR MaLR 0 505 1 671 318 181 12 chr10 33701362 33701484 -106615281 + L2 LINE L2 3212 3312 -1 242 326 92 0 chr10 33701884 33701982 -106614783 - MIR3 SINE MIR -53 155 49 298 250 54 22 chr10 33701992 33702084 -106614681 + MIR SINE MIR 152 246 -16 5563 189 99 9 chr10 33702388 33703666 -106613099 + Charlie1a DNA MER1_type 61 1452 -3 1836 160 0 7 chr10 33703727 33704008 -106612757 - AluJb SINE Alu -28 284 6 646 164 75 25 chr10 33704013 33704172 -106612593 - MER3 DNA MER1_type -42 167 1 23 33 0 0 chr10 33704771 33704801 -106611964 + AT_rich Low_complexity Low_complexity 1 30 0 281 29 0 200 chr10 33704938 33705008 -106611757 + U2 snRNA snRNA 1 56 -132 224 247 111 0 chr10 33705920 33706001 -106610764 + MIR SINE MIR 124 213 -49 2437 84 10 0 chr10 33706279 33706587 -106610178 + AluSq SINE Alu 1 311 -2 7417 183 28 13 chr10 33706593 33706626 -106610139 + L1PBa LINE L1 2420 2451 -4411 1835 88 78 3 chr10 33706626 33706910 -106609855 - L1PA13 LINE L1 0 6163 5859 7417 183 28 13 chr10 33706910 33708439 -106608326 + L1PBa LINE L1 2451 4063 -2799 2448 50 0 23 chr10 33708448 33708750 -106608015 - AluY SINE Alu -16 295 1 272 315 14 0 chr10 33709060 33709133 -106607632 - MIR SINE MIR -184 78 5 244 316 69 46 chr10 33710156 33710330 -106606435 - MIR SINE MIR -78 184 7 181 98 49 0 chr10 33712281 33712322 -106604443 + A-rich Low_complexity Low_complexity 4 46 0 246 105 0 0 chr10 33713240 33713278 -106603487 + (TA)n Simple_repeat Simple_repeat 1 38 0 2182 163 11 3 chr10 33713278 33713647 -106603118 + L1PA16 LINE L1 5784 6155 -11 301 348 163 0 chr10 33714418 33714553 -106602212 - L2 LINE L2 0 3272 3116 2166 189 138 22 chr10 33715541 33716127 -106600638 + MLT1E1 LTR MaLR 1 654 0 330 276 126 24 chr10 33716429 33716556 -106600209 + L2 LINE L2 3133 3272 0 348 316 51 63 chr10 33716788 33717025 -106599740 + L2 LINE L2 2619 2852 -462 264 232 0 0 chr10 33717222 33717278 -106599487 + L2 LINE L2 3182 3237 -76 1189 139 102 5 chr10 33717304 33717519 -106599246 - MER46A DNA MER2_type 0 236 1 371 370 95 38 chr10 33718269 33718531 -106598234 + L2 LINE L2 2995 3271 -1 30 0 0 0 chr10 33720776 33720806 -106595959 + AT_rich Low_complexity Low_complexity 1 30 0 231 250 0 0 chr10 33720964 33721012 -106595753 + (CAG)n Simple_repeat Simple_repeat 2 49 0 441 296 78 0 chr10 33722093 33722235 -106594530 - MIR SINE MIR -27 235 83 3181 57 2 0 chr10 33723655 33724057 -106592708 + L1PA5 LINE L1 5749 6151 -3 2143 100 11 48 chr10 33724573 33724664 -106592101 - L1P LINE L1 -3084 3062 2969 2632 14 0 3 chr10 33724664 33724958 -106591807 - AluYb8 SINE Alu -11 307 15 2143 100 11 48 chr10 33724958 33725237 -106591528 - L1P LINE L1 -3177 2969 2706 12093 91 14 1 chr10 33725237 33726956 -106589809 + L1PA7 LINE L1 3062 4802 -1344 * 12972 21 0 0 chr10 33726955 33728692 -106588073 - L1PA3 LINE L1 -543 5612 3876 4593 19 0 0 chr10 33728692 33729238 -106587527 + L1PA3 LINE L1 5617 6166 0 6805 50 25 6 chr10 33729257 33730612 -106586153 + L1PA7 LINE L1 4784 6153 -1 720 219 129 0 chr10 33731255 33731410 -106585355 - MER45A DNA AcHobo 0 178 4 451 320 50 58 chr10 33733029 33733265 -106583500 - MIR SINE MIR -26 236 7 395 301 35 18 chr10 33733695 33733808 -106582957 - MIR3 SINE MIR -21 187 73 402 21 0 0 chr10 33734183 33734230 -106582535 + (CAA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 33734433 33734454 -106582311 + AT_rich Low_complexity Low_complexity 1 21 0 295 301 38 21 chr10 33735178 33735364 -106581401 + L1ME LINE L1 5631 5819 -302 22 0 0 0 chr10 33735499 33735521 -106581244 + AT_rich Low_complexity Low_complexity 1 22 0 235 152 22 0 chr10 33735629 33735675 -106581090 + L1MD3 LINE L1 7927 7973 -22 2612 258 145 40 chr10 33736038 33737027 -106579738 - L2 LINE L2 0 3313 2098 2048 122 0 13 chr10 33737027 33737330 -106579435 + AluSx SINE Alu 1 299 -13 2612 258 145 40 chr10 33737330 33737886 -106578879 - L2 LINE L2 -1215 2098 1602 23 0 0 0 chr10 33737978 33738001 -106578764 + AT_rich Low_complexity Low_complexity 1 23 0 738 182 29 115 chr10 33738505 33738714 -106578051 - MER58C DNA MER1_type -24 191 1 281 0 0 0 chr10 33739087 33739166 -106577599 + L1PA5 LINE L1 6105 6179 0 1006 92 14 0 chr10 33739176 33739318 -106577447 + AluSg/x SINE Alu 166 309 0 286 323 129 8 chr10 33741282 33741530 -106575235 + L2 LINE L2 2377 2654 -660 919 250 98 40 chr10 33741563 33741939 -106574826 + L1ME3A LINE L1 5773 6170 0 200 209 93 0 chr10 33742283 33742326 -106574439 + L2 LINE L2 3164 3210 -62 245 181 24 24 chr10 33743170 33743183 -106573582 + (TA)n Simple_repeat Simple_repeat 2 14 -70 1817 156 0 13 chr10 33743183 33743484 -106573281 + AluJb SINE Alu 1 297 -15 245 181 24 24 chr10 33743484 33743553 -106573212 + (TA)n Simple_repeat Simple_repeat 13 84 0 414 0 0 0 chr10 33745044 33745090 -106571675 + (CA)n Simple_repeat Simple_repeat 1 46 0 710 183 30 71 chr10 33746085 33746282 -106570483 - MER53 DNA DNA 0 189 1 1241 168 102 0 chr10 33746364 33746638 -106570127 + MER33 DNA MER1_type 1 302 -22 21 0 0 0 chr10 33749664 33749685 -106567080 + AT_rich Low_complexity Low_complexity 1 21 0 367 246 9 61 chr10 33749708 33749822 -106566943 + L2 LINE L2 3187 3294 -19 27 73 0 0 chr10 33749920 33749975 -106566790 + AT_rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr10 33750105 33750130 -106566635 + AT_rich Low_complexity Low_complexity 1 25 0 2315 109 0 3 chr10 33750496 33750807 -106565958 + AluSg SINE Alu 1 310 0 193 255 21 0 chr10 33751746 33751793 -106564972 - MER5C DNA MER1_type 0 324 277 225 298 105 18 chr10 33751927 33752041 -106564724 - MER5C DNA MER1_type -200 124 1 1939 155 0 7 chr10 33752052 33752355 -106564410 + AluSx SINE Alu 7 307 -5 835 249 30 0 chr10 33752516 33752717 -106564048 + MER3 DNA MER1_type 1 207 -2 921 205 45 0 chr10 33752934 33753134 -106563631 - MER3 DNA MER1_type 0 209 1 24 32 0 0 chr10 33753210 33753241 -106563524 + AT_rich Low_complexity Low_complexity 1 31 0 2145 118 13 0 chr10 33754286 33754592 -106562173 - AluSx SINE Alu -2 310 1 320 208 32 80 chr10 33755012 33755137 -106561628 - L1M4 LINE L1 -1844 4302 4184 327 307 12 48 chr10 33755610 33755776 -106560989 + L1MC5 LINE L1 7059 7218 -743 225 308 120 30 chr10 33755806 33755939 -106560826 + L1MC4 LINE L1 7324 7468 -574 546 236 94 112 chr10 33755958 33756585 -106560180 + L1MC5 LINE L1 7297 7912 -49 22 35 0 0 chr10 33756774 33756803 -106559962 + AT_rich Low_complexity Low_complexity 1 29 0 216 97 0 0 chr10 33756840 33756871 -106559894 + (TA)n Simple_repeat Simple_repeat 2 32 0 182 79 0 53 chr10 33756876 33756914 -106559851 + (CAGAGA)n Simple_repeat Simple_repeat 6 41 0 30 0 0 0 chr10 33757746 33757776 -106558989 + AT_rich Low_complexity Low_complexity 1 30 0 277 136 55 18 chr10 33758206 33758316 -106558449 + (TA)n Simple_repeat Simple_repeat 2 115 0 780 304 55 0 chr10 33759529 33759746 -106557019 - MIR SINE MIR -22 240 12 191 367 0 0 chr10 33760150 33760210 -106556555 + L2 LINE L2 3213 3272 0 219 232 196 0 chr10 33760450 33760506 -106556259 - L3 LINE CR1 -155 1422 1356 465 19 0 0 chr10 33761229 33761283 -106555482 + (TG)n Simple_repeat Simple_repeat 1 54 0 266 295 53 42 chr10 33761786 33761881 -106554884 + L2 LINE L2 3147 3242 -30 21 0 0 0 chr10 33762993 33763014 -106553751 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr10 33763108 33763133 -106553632 + (CA)n Simple_repeat Simple_repeat 2 26 0 640 169 8 8 chr10 33765308 33765432 -106551333 + FLAM_C SINE Alu 1 124 -19 300 274 19 66 chr10 33765471 33765577 -106551188 - MIR SINE MIR -66 142 42 602 85 0 0 chr10 33765916 33765998 -106550767 - AluY SINE Alu -229 82 1 5419 167 28 11 chr10 33766180 33767237 -106549528 + L1MA7 LINE L1 5214 6288 -3 22 35 0 0 chr10 33767587 33767616 -106549149 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr10 33767736 33767786 -106548979 + AT_rich Low_complexity Low_complexity 1 50 0 804 149 99 99 chr10 33767786 33767874 -106548891 - MER2 DNA MER2_type -143 202 115 1788 157 0 7 chr10 33767874 33768176 -106548589 + AluJb SINE Alu 5 304 0 804 149 99 99 chr10 33768176 33768287 -106548478 - MER2 DNA MER2_type -229 116 2 268 214 0 60 chr10 33768289 33768373 -106548392 + L1MC4 LINE L1 6624 6702 -1340 535 259 38 25 chr10 33768713 33768871 -106547894 + MIR SINE MIR 85 244 -18 234 244 0 0 chr10 33768884 33768929 -106547836 + (CACCAT)n Simple_repeat Simple_repeat 2 46 0 226 284 0 54 chr10 33768930 33769004 -106547761 - MER5A DNA MER1_type -26 163 94 195 372 122 11 chr10 33769518 33769698 -106547067 - L2 LINE L2 -181 3091 2892 744 164 0 22 chr10 33769872 33770006 -106546759 + FLAM_C SINE Alu 1 131 -2 22 0 0 0 chr10 33770421 33770443 -106546322 + AT_rich Low_complexity Low_complexity 1 22 0 341 250 0 0 chr10 33770864 33770944 -106545821 + L1M1 LINE L1 3539 3618 -3947 196 297 14 0 chr10 33771541 33771615 -106545150 + MIR SINE MIR 21 95 -167 206 250 0 0 chr10 33773091 33773131 -106543634 - L2 LINE L2 -21 3251 3212 2978 184 64 14 chr10 33773161 33773804 -106542961 + L1MA7 LINE L1 5617 6291 0 443 267 66 36 chr10 33773869 33774172 -106542593 + L1MC1 LINE L1 1192 1503 -4913 1774 149 32 36 chr10 33774187 33774495 -106542270 + AluJo SINE Alu 1 307 -5 220 358 88 10 chr10 33774502 33774706 -106542059 - L2 LINE L2 -1153 2161 1942 236 323 200 8 chr10 33774706 33774836 -106541929 - L2 LINE L2 -7 3265 3111 30854 94 8 28 chr10 33775055 33780719 -106536046 - L1PA7 LINE L1 -4 6465 902 11267 204 42 26 chr10 33781066 33781719 -106535046 + L1MC1 LINE L1 1985 2626 -3987 2091 108 0 7 chr10 33781719 33782005 -106534760 + AluSg SINE Alu 1 284 -26 11267 204 42 26 chr10 33782005 33782465 -106534300 + L1MC1 LINE L1 2626 3077 -3536 1514 196 7 21 chr10 33782465 33782751 -106534014 + AluJo SINE Alu 1 282 -30 11267 204 42 26 chr10 33782751 33786137 -106530628 + L1MC1 LINE L1 3077 6588 -25 381 285 96 16 chr10 33786191 33786514 -106530251 + L1M4 LINE L1 4259 4607 -1539 1727 177 87 9 chr10 33786659 33787023 -106529742 - MER82 DNA MER2_type -28 625 203 6106 142 49 3 chr10 33787569 33788540 -106528225 + Tigger1 DNA MER2_type 2 1017 -1401 323 155 309 0 chr10 33788553 33788650 -106528115 + L1ME1 LINE L1 5838 5964 -202 203 156 0 0 chr10 33788650 33788682 -106528083 + (CA)n Simple_repeat Simple_repeat 1 32 0 738 34 0 0 chr10 33788905 33788994 -106527771 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 243 0 0 0 chr10 33788994 33789021 -106527744 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 985 99 12 12 chr10 33789021 33789182 -106527583 + (GAAA)n Simple_repeat Simple_repeat 4 164 0 1628 175 72 52 chr10 33789405 33789793 -106526972 + MSTD LTR MaLR 1 396 0 2246 106 53 34 chr10 33792598 33792955 -106523810 + THE1B LTR MaLR 1 364 0 1368 162 3 125 chr10 33793243 33793570 -106523195 - AluJo SINE Alu -25 287 1 2517 64 0 3 chr10 33793579 33793875 -106522890 - AluSp SINE Alu -18 295 1 1584 181 23 0 chr10 33793898 33794157 -106522608 - AluJo SINE Alu -37 275 11 282 304 54 9 chr10 33795387 33795499 -106521266 - L2 LINE L2 -3 3269 3153 2260 101 14 3 chr10 33797917 33798214 -106518551 - AluSp SINE Alu -13 300 1 666 292 130 24 chr10 33798468 33798838 -106517927 + MLT1J LTR MaLR 103 511 0 5551 90 11 60 chr10 33799209 33800077 -106516688 - LTR12 LTR ERV1 0 826 1 2228 105 0 0 chr10 33800904 33801189 -106515576 - AluSc SINE Alu -21 288 4 2098 120 0 29 chr10 33801588 33801897 -106514868 + AluSx SINE Alu 1 300 -12 2353 164 31 14 chr10 33802181 33802601 -106514164 - L1MB3 LINE L1 -298 6383 5957 1910 218 62 28 chr10 33802599 33803134 -106513631 - L1MB3 LINE L1 -2586 4058 3494 * 2199 141 0 0 chr10 33803134 33803432 -106513333 + AluSx SINE Alu 1 298 -14 1910 218 62 28 chr10 33803432 33803569 -106513196 - L1MB3 LINE L1 -3150 3494 3363 277 257 46 10 chr10 33803573 33803720 -106513045 + L1MA8 LINE L1 6083 6236 -76 2934 205 18 28 chr10 33803721 33804461 -106512304 - L1MB3 LINE L1 -4951 1695 964 240 163 0 0 chr10 33804533 33804576 -106512189 + CT-rich Low_complexity Low_complexity 1 43 0 377 267 37 7 chr10 33804623 33804758 -106512007 - L1MB3 LINE L1 -5587 955 817 267 257 14 14 chr10 33804806 33804876 -106511889 - L1M3d LINE L1 -5117 1448 1379 * 368 324 14 7 chr10 33804873 33805015 -106511750 - L1M3d LINE L1 -5700 946 804 239 263 58 100 chr10 33805317 33805576 -106511189 - L1M3d LINE L1 -6293 249 2 264 263 0 0 chr10 33805668 33805725 -106511040 - L2 LINE L2 -8 3305 3249 199 250 0 0 chr10 33805773 33805825 -106510940 - L2 LINE L2 0 3313 3262 432 323 115 27 chr10 33806135 33806723 -106510042 - L2 LINE L2 -221 3051 2403 1093 243 59 50 chr10 33806792 33807133 -106509632 + LTR16A1 LTR ERVL 114 457 0 1199 202 71 32 chr10 33807324 33807593 -106509172 + AluJo SINE Alu 2 284 -18 723 104 0 0 chr10 33807593 33807699 -106509066 + (GGGGA)n Simple_repeat Simple_repeat 3 108 0 1199 202 71 32 chr10 33807699 33807711 -106509054 + AluJo SINE Alu 284 294 -8 1453 316 93 30 chr10 33807875 33809200 -106507565 + HERV16 LTR ERVL 579 2120 -3035 1397 216 5 81 chr10 33809223 33809616 -106507149 - MLT2B1 LTR ERVL -157 363 1 193 189 0 0 chr10 33809616 33809653 -106507112 - MIR SINE MIR -173 89 53 340 294 131 32 chr10 33809697 33809949 -106506816 - L2 LINE L2 -1051 2263 1987 1581 125 0 142 chr10 33810633 33810970 -106505795 + AluJo SINE Alu 1 289 -13 2286 168 58 5 chr10 33811133 33811531 -106505234 + MSTB LTR MaLR 8 426 0 276 258 180 16 chr10 33811537 33811665 -106505100 - MIR SINE MIR -112 150 2 347 287 7 15 chr10 33811730 33811866 -106504899 - L2 LINE L2 -1265 2049 1915 763 245 31 0 chr10 33812495 33812654 -106504111 - FRAM SINE Alu -2 164 1 1897 97 0 8 chr10 33812707 33812954 -106503811 - AluSx SINE Alu -15 297 53 239 271 227 30 chr10 33813917 33814120 -106502645 + L1ME LINE L1 5582 5824 -297 2345 81 40 0 chr10 33814125 33814423 -106502342 + AluSp SINE Alu 1 310 -3 360 195 53 80 chr10 33814465 33814615 -106502150 + HAL1b LINE L1 1193 1308 -40 184 360 47 12 chr10 33816985 33817071 -106499694 - L2 LINE L2 -15 3257 3169 272 48 24 0 chr10 33818775 33818817 -106497948 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 195 292 105 48 chr10 33819090 33819299 -106497466 + L2 LINE L2 1796 2016 -1298 2280 96 0 7 chr10 33820054 33820347 -106496418 - AluSg SINE Alu -19 291 1 237 108 0 0 chr10 33820519 33820556 -106496209 + (GA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr10 33820658 33820687 -106496078 + AT_rich Low_complexity Low_complexity 1 29 0 6719 101 31 18 chr10 33820772 33821951 -106494814 - L1MA4A LINE L1 -3 6300 5105 237 278 0 0 chr10 33822620 33822674 -106494091 + L3 LINE CR1 1509 1562 -15 235 361 45 15 chr10 33822775 33822908 -106493857 - L3b LINE CR1 -140 1443 1307 1533 151 0 0 chr10 33822941 33823180 -106493585 - Tigger5 DNA MER2_type 0 2323 2085 1258 169 14 24 chr10 33823170 33823383 -106493382 - Tigger5 DNA MER2_type -2085 238 28 * 221 116 0 23 chr10 33824158 33824201 -106492564 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 226 287 183 9 chr10 33825403 33825518 -106491247 - MIR SINE MIR -19 243 109 228 67 0 0 chr10 33825568 33825598 -106491167 + (CTG)n Simple_repeat Simple_repeat 1 30 0 192 179 0 0 chr10 33825802 33825841 -106490924 + CT-rich Low_complexity Low_complexity 1 39 0 238 174 43 0 chr10 33825919 33825965 -106490800 - L2 LINE L2 -88 3184 3137 809 178 70 76 chr10 33826132 33826317 -106490448 + MER20 DNA MER1_type 36 219 0 311 316 26 0 chr10 33826528 33826642 -106490123 + MIR SINE MIR 30 146 -62 291 153 77 135 chr10 33826772 33826942 -106489823 - L1ME4a LINE L1 -11 6110 5951 3329 143 151 22 chr10 33827239 33827923 -106488842 - LTR48 LTR ERV1 0 787 16 745 149 65 39 chr10 33827992 33828146 -106488619 - LTR48 LTR ERV1 -31 756 599 638 241 76 2 chr10 33828231 33828391 -106488374 + L1PA16 LINE L1 5997 6163 -2 211 253 12 36 chr10 33829308 33829391 -106487374 + GA-rich Low_complexity Low_complexity 3 83 0 324 0 0 0 chr10 33829964 33830000 -106486765 + (TG)n Simple_repeat Simple_repeat 2 37 0 939 235 15 0 chr10 33832238 33832442 -106484323 - MIR SINE MIR -41 221 15 2118 156 51 13 chr10 33833986 33834418 -106482347 + MER61C LTR ERV1 1 433 -1 262 246 27 48 chr10 33834576 33834626 -106482139 + MIR SINE MIR 114 164 -98 1919 119 0 0 chr10 33834626 33834895 -106481870 + AluSx SINE Alu 38 306 -6 262 246 27 48 chr10 33834895 33834960 -106481805 + MIR SINE MIR 164 225 -37 295 265 113 13 chr10 33835114 33835265 -106481500 + L1ME4a LINE L1 5909 6074 -47 197 373 114 25 chr10 33835848 33836006 -106480759 + L3b LINE CR1 1403 1574 -9 286 265 0 15 chr10 33836334 33836402 -106480363 - MLT1L LTR MaLR -221 394 328 * 413 292 72 15 chr10 33836388 33836583 -106480182 - MLT1L LTR MaLR -394 221 16 605 287 113 27 chr10 33836624 33836952 -106479813 + HAL1 LINE L1 1515 1870 -637 298 295 30 42 chr10 33837403 33837569 -106479196 + HAL1b LINE L1 743 906 -442 1153 210 61 91 chr10 33837660 33838155 -106478610 + L1MC5 LINE L1 6693 7172 -789 465 200 48 0 chr10 33838164 33838269 -106478496 - L1MA4A LINE L1 -5 6298 6189 2148 158 2 50 chr10 33838269 33838667 -106478098 - L1PB4 LINE L1 -98 6058 5680 1341 241 86 33 chr10 33838665 33839155 -106477610 + L1MC5 LINE L1 7175 7690 -271 * 2359 87 0 3 chr10 33839206 33839506 -106477259 - AluSp SINE Alu -14 299 1 822 220 37 18 chr10 33840823 33841041 -106475724 + L1MC5 LINE L1 7705 7926 -35 2246 126 36 8 chr10 33841380 33841738 -106475027 - L1MB4 LINE L1 0 6180 5813 5477 175 9 9 chr10 33841739 33842953 -106473812 - L1MB3 LINE L1 -8 6175 4958 308 293 204 7 chr10 33843787 33843934 -106472831 - MIR SINE MIR -71 191 16 2218 124 58 28 chr10 33844257 33844621 -106472144 - THE1C LTR MaLR 0 375 1 1253 171 82 4 chr10 33844623 33844868 -106471897 - MER74A LTR ERVL -294 264 1 360 277 61 40 chr10 33844900 33845048 -106471717 - MIR SINE MIR -71 191 41 16129 129 24 7 chr10 33845724 33848100 -106468665 + Tigger1 DNA MER2_type 1 2417 -1 233 351 0 21 chr10 33848438 33848532 -106468233 - MIR3 SINE MIR -27 181 90 252 188 0 0 chr10 33848578 33848642 -106468123 + (CA)n Simple_repeat Simple_repeat 1 64 0 1085 189 98 80 chr10 33848699 33848985 -106467780 - MLT2B1 LTR ERVL 0 520 230 14497 201 64 18 chr10 33850414 33852277 -106464488 - L1MA5 LINE L1 -7 6995 5219 2373 97 0 0 chr10 33852277 33852577 -106464188 - AluSc SINE Alu -9 300 1 14497 201 64 18 chr10 33852577 33857317 -106459448 - L1MA5 LINE L1 -1783 5219 68 1214 115 6 0 chr10 33857563 33857737 -106459028 - L1MA6 LINE L1 -316 5984 5810 718 101 9 28 chr10 33857737 33857842 -106458923 + L1MA6 LINE L1 6189 6295 -5 7254 132 18 0 chr10 33858004 33859148 -106457617 - L1PA8A LINE L1 -2068 4078 2915 9811 110 1 39 chr10 33859148 33861258 -106455507 + L1PA8A LINE L1 4051 6129 -2 376 324 159 18 chr10 33861304 33861390 -106455375 + L1ME LINE L1 748 821 -5298 2241 105 0 0 chr10 33861390 33861686 -106455079 + AluSq SINE Alu 1 296 -17 376 324 159 18 chr10 33861686 33862046 -106454719 + L1ME LINE L1 821 1257 -4862 3410 259 82 24 chr10 33862104 33863363 -106453402 + L1ME LINE L1 3780 5149 -996 186 103 0 0 chr10 33863363 33863392 -106453373 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3410 259 82 24 chr10 33863392 33863711 -106453054 + L1ME LINE L1 5149 5448 -697 569 273 104 18 chr10 33863719 33863883 -106452882 + L1ME3 LINE L1 3209 3357 -2789 2189 86 0 0 chr10 33863883 33864152 -106452613 + AluSx SINE Alu 28 296 -16 569 273 104 18 chr10 33864152 33864313 -106452452 + L1ME3 LINE L1 3357 3562 -2584 313 257 144 81 chr10 33864862 33865084 -106451681 + HAL1 LINE L1 2266 2501 -6 23 0 0 0 chr10 33865546 33865569 -106451196 + AT_rich Low_complexity Low_complexity 1 23 0 410 308 57 19 chr10 33865601 33865812 -106450953 + L1ME3 LINE L1 5473 5691 -430 262 242 129 30 chr10 33865877 33866009 -106450756 - L2 LINE L2 0 3313 3169 389 215 118 15 chr10 33866047 33866182 -106450583 + L1ME4a LINE L1 5969 6117 -4 232 223 155 19 chr10 33866184 33866287 -106450478 + MIR SINE MIR 140 256 -6 1935 105 8 0 chr10 33867774 33868040 -106448725 - AluSp SINE Alu -5 308 41 996 235 15 15 chr10 33868141 33868401 -106448364 + L1ME3 LINE L1 5711 5970 -192 338 278 26 26 chr10 33868416 33868567 -106448198 - HAL1 LINE L1 -981 1526 1376 * 478 262 106 39 chr10 33868547 33868686 -106448079 - L1MEd LINE L1 -4862 1257 1129 2375 90 0 3 chr10 33868686 33868986 -106447779 - AluSq SINE Alu -14 299 1 478 262 106 39 chr10 33868986 33869417 -106447348 - L1MEd LINE L1 -4990 1129 561 824 150 8 0 chr10 33869417 33869544 -106447221 - FLAM_C SINE Alu -2 141 14 270 282 32 26 chr10 33869931 33870087 -106446678 - L1MEd LINE L1 -5961 158 2 297 206 68 0 chr10 33871587 33871660 -106445105 - MIR SINE MIR -82 180 103 1921 139 0 20 chr10 33871696 33871997 -106444768 + AluJo SINE Alu 1 295 -17 309 244 47 23 chr10 33872008 33872094 -106444671 - L3 LINE CR1 -56 1521 1434 287 235 15 0 chr10 33874312 33874380 -106442385 - Charlie8 DNA MER1_type -1000 1417 1349 188 345 35 53 chr10 33875612 33875725 -106441040 + MIR SINE MIR 72 182 -80 2473 202 51 40 chr10 33876312 33876915 -106439850 + L1MC4 LINE L1 6771 7380 -662 819 297 158 4 chr10 33876916 33877402 -106439363 + L2 LINE L2 2485 3049 -264 1919 99 26 0 chr10 33877425 33877697 -106439068 - L1MA9 LINE L1 -566 5746 5468 * 2312 172 25 40 chr10 33877690 33878213 -106438552 + L1MA9 LINE L1 5767 6281 -31 253 182 0 55 chr10 33878398 33878453 -106438312 + L2 LINE L2 3262 3313 0 502 250 89 5 chr10 33878911 33879135 -106437630 - LTR16C LTR ERVL 0 491 249 2680 186 9 28 chr10 33881057 33881388 -106435377 - L1PB4 LINE L1 -4 6152 5833 2239 109 23 0 chr10 33881388 33881690 -106435075 - AluSc SINE Alu 0 309 1 2680 186 9 28 chr10 33881690 33881897 -106434868 - L1PB4 LINE L1 -323 5833 5624 24 32 0 0 chr10 33881928 33881959 -106434806 + AT_rich Low_complexity Low_complexity 1 31 0 1775 141 0 0 chr10 33882019 33882296 -106434469 - L1PB4 LINE L1 -577 5579 5303 323 279 54 0 chr10 33882534 33882645 -106434120 - MIR SINE MIR -77 185 69 221 286 31 41 chr10 33882815 33882913 -106433852 - MIR SINE MIR -33 229 133 1834 180 0 7 chr10 33883145 33883445 -106433320 + AluJo SINE Alu 3 300 -12 180 0 0 0 chr10 33883483 33883503 -106433262 + (T)n Simple_repeat Simple_repeat 1 20 0 2883 130 2 65 chr10 33883859 33884383 -106432382 - L1PB1 LINE L1 -3 6148 5658 2369 123 88 20 chr10 33884671 33885068 -106431697 + MSTB LTR MaLR 3 426 0 321 250 174 14 chr10 33885136 33885280 -106431485 - MIR SINE MIR -36 226 60 378 246 103 32 chr10 33886880 33887006 -106429759 - L2 LINE L2 -1 3312 3178 383 235 49 12 chr10 33887006 33887141 -106429624 + (TA)n Simple_repeat Simple_repeat 1 144 -24 1860 195 14 3 chr10 33887141 33887485 -106429280 - MER7A DNA MER2_type 0 346 1 383 235 49 12 chr10 33887485 33887511 -106429254 + (TA)n Simple_repeat Simple_repeat 144 168 0 831 263 67 43 chr10 33887515 33888073 -106428692 - L2 LINE L2 -149 3164 2597 2775 277 106 26 chr10 33888073 33889108 -106427657 - L2 LINE L2 -1339 1975 816 1793 188 50 72 chr10 33889108 33889624 -106427141 - MLT1D LTR MaLR 0 505 1 2775 277 106 26 chr10 33889624 33889868 -106426897 - L2 LINE L2 -2498 816 593 2809 133 0 22 chr10 33890506 33890950 -106425815 - Tigger2a DNA MER2_type 0 434 1 1097 228 150 0 chr10 33892157 33892531 -106424234 + MER63B DNA MER1_type 1 434 0 738 127 0 17 chr10 33892641 33892759 -106424006 - AluJo SINE Alu -15 297 182 832 174 7 7 chr10 33892759 33892897 -106423868 - AluJo SINE Alu -165 147 10 838 264 103 29 chr10 33893234 33893718 -106423047 + L1MC/D LINE L1 5255 5774 -2034 309 26 0 0 chr10 33893825 33893863 -106422902 + (TTG)n Simple_repeat Simple_repeat 1 38 0 2303 68 0 4 chr10 33893864 33894142 -106422623 - AluSc SINE Alu -32 277 1 1302 226 133 11 chr10 33894405 33894759 -106422006 - LTR16C LTR ERVL -2 489 93 287 258 21 102 chr10 33894878 33895064 -106421701 + L1MC/D LINE L1 5616 5786 -2022 322 311 41 0 chr10 33895377 33895499 -106421266 + MIR SINE MIR 134 260 -2 1588 147 20 8 chr10 33895644 33895895 -106420870 - AluJo SINE Alu -34 278 25 295 239 263 32 chr10 33895900 33896151 -106420614 - L2 LINE L2 -3 3310 3002 336 132 0 0 chr10 33896657 33896710 -106420055 + MSTC LTR MaLR 1 53 -375 850 117 131 0 chr10 33896711 33896856 -106419909 + MSTC LTR MaLR 202 365 -63 1791 186 3 3 chr10 33896858 33897154 -106419611 + AluJo SINE Alu 3 298 -14 315 71 0 0 chr10 33897154 33897196 -106419569 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 482 154 0 0 chr10 33897196 33897274 -106419491 + MSTC LTR MaLR 351 428 0 195 180 0 98 chr10 33897285 33897346 -106419419 + L2 LINE L2 2992 3046 -226 530 115 13 0 chr10 33898500 33898578 -106418187 + AluJb SINE Alu 179 257 -55 403 203 9 53 chr10 33899227 33899358 -106417407 + L1PA10 LINE L1 5732 5837 -331 2776 85 21 94 chr10 33899696 33900177 -106416588 + L1PA11 LINE L1 5729 6174 0 207 0 0 0 chr10 33901526 33901549 -106415216 + (TC)n Simple_repeat Simple_repeat 2 24 0 296 323 0 20 chr10 33903846 33903945 -106412820 + MIR SINE MIR 52 148 -60 254 294 24 12 chr10 33903957 33904042 -106412723 + MER5A DNA MER1_type 57 142 -47 234 220 0 0 chr10 33904256 33904306 -106412459 - Charlie7 DNA MER1_type -31 2581 2532 21 57 0 0 chr10 33904366 33904401 -106412364 + AT_rich Low_complexity Low_complexity 1 35 0 3475 243 109 58 chr10 33904422 33904557 -106412208 - Charlie7 DNA MER1_type -255 2357 2230 1593 148 72 34 chr10 33904557 33904848 -106411917 - AluJb SINE Alu -10 302 1 3475 243 109 58 chr10 33904848 33905721 -106411044 - Charlie7 DNA MER1_type -382 2230 1228 2611 57 0 0 chr10 33905721 33906022 -106410743 - AluY SINE Alu -10 301 1 3475 243 109 58 chr10 33906022 33906693 -106410072 - Charlie7 DNA MER1_type -1384 1228 592 1372 177 16 0 chr10 33906694 33906942 -106409823 - L1MD3 LINE L1 -5 7990 7739 2112 108 0 17 chr10 33906992 33907289 -106409476 + AluSc SINE Alu 1 292 -17 1772 167 10 3 chr10 33907294 33907587 -106409178 + AluSx SINE Alu 1 295 -17 247 183 108 97 chr10 33907743 33907836 -106408929 - Charlie7 DNA MER1_type -2412 200 107 2268 120 3 0 chr10 33908384 33908693 -106408072 + AluSx SINE Alu 2 311 -1 1398 251 78 10 chr10 33908763 33909146 -106407619 + LTR16A LTR ERVL 29 437 -13 273 57 0 0 chr10 33909240 33909275 -106407490 + (TG)n Simple_repeat Simple_repeat 2 36 0 2289 90 0 0 chr10 33909531 33909837 -106406928 - AluSc SINE Alu 0 309 4 538 254 53 74 chr10 33909843 33909945 -106406820 - MIR SINE MIR -11 251 148 2245 122 0 0 chr10 33909945 33910241 -106406524 - AluSg SINE Alu -14 296 1 538 254 53 74 chr10 33910241 33910382 -106406383 - MIR SINE MIR -114 148 13 283 311 10 0 chr10 33910408 33910511 -106406254 - L1MC/D LINE L1 -2036 5772 5669 1677 179 0 27 chr10 33912661 33912957 -106403808 + AluJo SINE Alu 1 288 -24 325 320 16 24 chr10 33913517 33913642 -106403123 - L2 LINE L2 -9 3304 3181 1425 209 39 26 chr10 33913700 33914007 -106402758 - MLT2C1 LTR ERVL -53 344 34 3549 236 42 28 chr10 33914012 33914990 -106401775 + L1MEc LINE L1 263 1254 -5142 2987 230 54 68 chr10 33914995 33916179 -106400586 + L1M4 LINE L1 3957 5124 -1022 22 0 0 0 chr10 33916736 33916758 -106400007 + AT_rich Low_complexity Low_complexity 1 22 0 536 249 164 24 chr10 33916918 33917083 -106399682 + MER5A DNA MER1_type 1 188 -1 1039 241 196 6 chr10 33917084 33917416 -106399349 + MLT1L LTR MaLR 148 542 -73 1164 232 47 56 chr10 33918809 33919191 -106397574 + MLT1J2 LTR MaLR 53 440 -6 1479 63 5 44 chr10 33919215 33919382 -106397383 - MER107 DNA MER1_type 0 197 38 2032 143 47 14 chr10 33919382 33919745 -106397020 + THE1C LTR MaLR 1 375 0 1479 63 5 44 chr10 33919745 33919782 -106396983 - MER107 DNA MER1_type -159 38 1 2362 102 3 13 chr10 33920262 33920577 -106396188 - AluSp SINE Alu -1 312 1 718 179 0 24 chr10 33920694 33920817 -106395948 - FLAM_A SINE Alu -9 124 5 3157 183 8 16 chr10 33920949 33921577 -106395188 - L1MB4 LINE L1 -7 6173 5551 2141 117 0 37 chr10 33921579 33921904 -106394861 - AluSq SINE Alu 0 313 1 1419 224 87 61 chr10 33922104 33922528 -106394237 + MER69 DNA AcHobo 1 435 -791 992 245 37 4 chr10 33922557 33922802 -106393963 + MER69 DNA AcHobo 509 761 -465 1197 209 52 41 chr10 33922855 33923218 -106393547 + MER69 DNA AcHobo 2017 2383 -143 1171 174 5 40 chr10 33923218 33923442 -106393323 - AluJb SINE Alu -9 303 88 299 261 56 14 chr10 33923447 33923589 -106393176 + MER69 DNA AcHobo 2375 2522 -4 364 167 17 0 chr10 33923826 33923886 -106392879 + MLT1E2 LTR MaLR 1 61 -565 1312 210 50 55 chr10 33923890 33924233 -106392532 - MLT1A1 LTR MaLR 0 365 25 470 316 61 77 chr10 33924233 33924676 -106392089 + L1M2a LINE L1 6 441 -6727 2366 206 95 28 chr10 33925050 33925203 -106391562 + L1M2a LINE L1 1863 2004 -5164 372 22 0 0 chr10 33925203 33925248 -106391517 + (CA)n Simple_repeat Simple_repeat 2 46 0 2366 206 95 28 chr10 33925248 33926089 -106390676 + L1M2a LINE L1 2004 2856 -4312 2902 69 44 5 chr10 33926089 33926478 -106390287 + MLT2A1 LTR ERVL 1 404 -40 262 87 72 29 chr10 33926478 33926616 -106390149 + (TA)n Simple_repeat Simple_repeat 2 145 0 380 53 0 35 chr10 33926631 33926688 -106390077 + MLT2A1 LTR ERVL 399 453 0 10636 209 51 29 chr10 33926688 33926935 -106389830 + L1MA9 LINE L1 2923 3163 -4547 2074 95 25 77 chr10 33926935 33927262 -106389503 + AluSg SINE Alu 1 310 0 10636 209 51 29 chr10 33927262 33930303 -106386462 + L1MA9 LINE L1 3163 6135 -1575 553 100 10 10 chr10 33930303 33930403 -106386362 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 10636 209 51 29 chr10 33930403 33930418 -106386347 + L1MA9 LINE L1 6135 6148 -1562 234 0 0 0 chr10 33930418 33930444 -106386321 + (CA)n Simple_repeat Simple_repeat 2 27 0 10636 209 51 29 chr10 33930444 33930509 -106386256 + L1MA9 LINE L1 6148 7271 -439 1574 168 22 6 chr10 33930520 33930823 -106385942 + L1MA9 LINE L1 7398 7698 -12 1947 76 3 99 chr10 33931477 33931781 -106384984 + AluY SINE Alu 35 309 -2 1163 182 21 0 chr10 33931821 33932008 -106384757 - MER58A DNA MER1_type 0 224 34 687 192 56 111 chr10 33933795 33933872 -106382893 + MER7A DNA MER2_type 2 82 -2956 2175 122 0 7 chr10 33933872 33934167 -106382598 - AluSq SINE Alu -20 293 1 687 192 56 111 chr10 33934167 33934192 -106382573 + MER7A DNA MER2_type 82 107 -2931 1885 174 3 0 chr10 33934192 33934490 -106382275 - AluJb SINE Alu -13 299 1 687 192 56 111 chr10 33934490 33934584 -106382181 + MER7A DNA MER2_type 107 186 -160 308 297 0 0 chr10 33934816 33934907 -106381858 - LTR58 LTR ERV1 -229 450 360 759 197 0 0 chr10 33935090 33935217 -106381548 + MER7A DNA MER2_type 171 297 -39 2278 159 28 44 chr10 33935628 33935842 -106380923 + MSTB1 LTR MaLR 4 209 -223 2467 71 0 3 chr10 33935842 33936139 -106380626 - AluY SINE Alu -15 296 1 2278 159 28 44 chr10 33936139 33936358 -106380407 + MSTB1 LTR MaLR 209 430 -2 644 150 0 53 chr10 33938186 33938319 -106378446 + L1PB4 LINE L1 6019 6144 -12 2211 120 3 0 chr10 33938326 33938618 -106378147 + AluSp SINE Alu 1 293 -20 2022 101 0 31 chr10 33940327 33940614 -106376151 - AluSq SINE Alu -11 302 25 307 226 71 0 chr10 33941204 33941288 -106375477 - MIR SINE MIR -10 252 163 2954 162 32 20 chr10 33941291 33941319 -106375446 - L1MA4A LINE L1 -141 6162 6136 615 127 25 17 chr10 33941319 33941437 -106375328 - L1MA4A LINE L1 -4 6299 6181 2954 162 32 20 chr10 33941437 33941994 -106374771 - L1MA4A LINE L1 -167 6136 5570 955 112 0 15 chr10 33942112 33942246 -106374519 - FLAM_C SINE Alu 0 143 12 1809 181 10 3 chr10 33942262 33942561 -106374204 - AluJb SINE Alu -11 301 1 309 109 0 0 chr10 33943584 33943630 -106373135 + (TG)n Simple_repeat Simple_repeat 2 47 0 4189 82 14 2 chr10 33945050 33945663 -106371102 + L1PA8A LINE L1 5374 6019 -112 2330 159 36 12 chr10 33946499 33946915 -106369850 - MSTB LTR MaLR 0 426 1 221 313 0 0 chr10 33947163 33947227 -106369538 + MER5B DNA MER1_type 46 109 -69 186 43 0 0 chr10 33947259 33947282 -106369483 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1785 158 3 18 chr10 33947285 33947570 -106369195 - AluJo SINE Alu -31 281 1 274 273 0 0 chr10 33947687 33947753 -106369012 + L2 LINE L2 3248 3313 0 1937 164 0 6 chr10 33948780 33949092 -106367673 + AluJb SINE Alu 1 310 -2 193 359 26 13 chr10 33949094 33949172 -106367593 + L2 LINE L2 3174 3252 -20 361 225 210 7 chr10 33950458 33950596 -106366169 - MIR SINE MIR -41 221 56 282 292 81 42 chr10 33951330 33951553 -106365212 + L1ME LINE L1 5213 5426 -695 198 71 0 0 chr10 33951553 33951581 -106365184 + (TG)n Simple_repeat Simple_repeat 2 29 0 282 292 81 42 chr10 33951581 33951780 -106364985 + L1ME LINE L1 5426 5651 -470 328 75 0 0 chr10 33951781 33951834 -106364931 - L1MB4 LINE L1 -1 6179 6127 856 128 21 21 chr10 33951990 33952131 -106364634 - L1MB3 LINE L1 -38 6145 6005 1645 150 66 22 chr10 33952131 33952405 -106364360 + AluJo SINE Alu 1 286 -26 490 128 0 12 chr10 33952435 33952521 -106364244 - L1MB3 LINE L1 -162 6021 5937 190 171 24 0 chr10 33952581 33952622 -106364143 - L2 LINE L2 0 3313 3272 272 272 165 0 chr10 33953690 33953793 -106362972 + MIR SINE MIR 65 184 -78 453 255 82 36 chr10 33954040 33954236 -106362529 + L3 LINE CR1 1110 1314 -263 1722 160 3 33 chr10 33954293 33954384 -106362381 + AluJo SINE Alu 3 95 -217 1879 129 41 0 chr10 33954384 33954680 -106362085 + AluSg SINE Alu 1 307 0 1722 160 3 33 chr10 33954680 33954887 -106361878 + AluJo SINE Alu 95 293 -19 27 0 0 0 chr10 33955375 33955402 -106361363 + AT_rich Low_complexity Low_complexity 1 27 0 207 162 0 0 chr10 33957084 33957121 -106359644 + CT-rich Low_complexity Low_complexity 4 40 0 295 224 0 0 chr10 33957888 33957946 -106358819 + MER103 DNA DNA 48 105 -61 1679 147 0 29 chr10 33958184 33958456 -106358309 + AluSx SINE Alu 33 296 -16 404 267 52 0 chr10 33958505 33958640 -106358125 + MIR SINE MIR 47 188 -74 23 78 0 0 chr10 33958673 33958724 -106358041 + AT_rich Low_complexity Low_complexity 1 51 0 1649 153 0 4 chr10 33959097 33959352 -106357413 - AluJo SINE Alu -17 295 42 365 286 41 29 chr10 33960273 33960444 -106356321 + LTR16C LTR ERVL 316 488 -3 2380 95 0 0 chr10 33960455 33960749 -106356016 - AluSg SINE Alu -16 294 1 602 310 31 0 chr10 33961362 33961620 -106355145 + HERV16 LTR ERVL 3288 3553 -2211 768 256 137 59 chr10 33961625 33962050 -106354715 + HERV16 LTR ERVL 3262 3719 -1277 1889 335 43 39 chr10 33962097 33963286 -106353479 + HERV16 LTR ERVL 4130 5323 -441 251 356 17 8 chr10 33963255 33963373 -106353392 + HERV16 LTR ERVL 4787 4905 -91 * 1247 259 51 22 chr10 33963501 33963856 -106352909 + LTR16A LTR ERVL 28 392 -58 231 244 71 71 chr10 33964097 33964224 -106352541 - Charlie5 DNA MER1_type -230 2382 2256 220 322 78 9 chr10 33965818 33965933 -106350832 + L2 LINE L2 3150 3272 0 1938 158 7 0 chr10 33967212 33967509 -106349256 - AluSx SINE Alu -13 299 1 1405 171 86 21 chr10 33970378 33970658 -106346107 + AluJo SINE Alu 1 298 -14 959 168 24 67 chr10 33972205 33972247 -106344518 - MER58A DNA MER1_type -2196 224 182 2306 106 0 3 chr10 33972247 33972549 -106344216 - AluSx SINE Alu -11 301 1 959 168 24 67 chr10 33972549 33972714 -106344051 - MER58A DNA MER1_type -2238 182 26 258 336 27 9 chr10 33972721 33972831 -106343934 - MIR3 SINE MIR -48 160 49 1814 174 0 13 chr10 33973149 33973459 -106343306 - AluJo SINE Alu -6 306 1 1492 155 20 82 chr10 33974120 33974423 -106342342 - AluJo SINE Alu -28 284 1 379 325 45 45 chr10 33974547 33974836 -106341929 + L1MEd LINE L1 254 542 -5577 442 275 18 18 chr10 33975160 33975331 -106341434 + L1MEd LINE L1 895 1065 -5054 22 0 0 0 chr10 33976933 33976955 -106339810 + AT_rich Low_complexity Low_complexity 1 22 0 750 257 23 6 chr10 33977211 33977386 -106339379 + MIR SINE MIR 36 213 -49 220 295 45 62 chr10 33977675 33977787 -106338978 + MIR SINE MIR 141 250 -12 2211 146 22 36 chr10 33977805 33978268 -106338497 + MSTA LTR MaLR 6 426 0 41087 33 1 1 chr10 33978372 33983994 -106332771 + L1PA3 LINE L1 533 6152 -3 22 0 0 0 chr10 33983994 33984016 -106332749 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 33984048 33984076 -106332689 + AT_rich Low_complexity Low_complexity 1 28 0 2276 89 6 16 chr10 33984926 33985239 -106331526 - AluSg SINE Alu 0 310 1 1526 186 17 33 chr10 33985373 33985674 -106331091 - AluJo SINE Alu -16 296 1 1746 170 3 32 chr10 33986243 33986555 -106330210 - AluJo SINE Alu -9 303 1 537 285 129 38 chr10 33986836 33987239 -106329526 + L2 LINE L2 2599 3078 -235 1661 124 75 14 chr10 33987239 33987521 -106329244 - AluJo SINE Alu -13 299 1 537 285 129 38 chr10 33987521 33987768 -106328997 + L2 LINE L2 3078 3301 -12 1006 214 6 0 chr10 33988234 33988407 -106328358 - MER45A DNA AcHobo -4 174 1 2162 92 17 20 chr10 33988451 33988743 -106328022 + AluSx SINE Alu 1 291 -21 242 185 0 58 chr10 33989304 33989408 -106327357 - MIR SINE MIR -50 212 89 2434 65 27 3 chr10 33991313 33991327 -106325438 + L1P3 LINE L1 5043 5055 -1117 609 73 0 0 chr10 33991327 33991409 -106325356 - L1PA8 LINE L1 0 6172 6091 2434 65 27 3 chr10 33991409 33991835 -106324930 + L1P3 LINE L1 5055 5491 -681 216 310 56 14 chr10 33993246 33993317 -106323448 - MER5B DNA MER1_type -2 176 103 25 0 0 50 chr10 33993356 33993373 -106323392 + AT_rich Low_complexity Low_complexity 1 17 -21 2027 78 0 4 chr10 33993373 33993629 -106323136 - L1PB1 LINE L1 -5 6146 5892 25 0 0 50 chr10 33993629 33993651 -106323114 + AT_rich Low_complexity Low_complexity 17 38 0 2306 110 0 0 chr10 33994814 33995115 -106321650 - AluSx SINE Alu -11 301 1 389 241 173 0 chr10 33995555 33995688 -106321077 + MER117 DNA MER1_type 2 157 -40 999 157 46 30 chr10 33996518 33996715 -106320050 + THE1C LTR MaLR 176 375 0 242 376 92 0 chr10 33997215 33997324 -106319441 - L2 LINE L2 -38 3234 3116 344 206 164 34 chr10 33997336 33997482 -106319283 - MER104 DNA Tc2 -13 167 3 1223 180 75 81 chr10 33997628 33997866 -106318899 - MLT1B LTR MaLR -47 343 106 1394 187 40 90 chr10 33997866 33998245 -106318520 - MLT1A1 LTR MaLR -3 362 3 1223 180 75 81 chr10 33998245 33998351 -106318414 - MLT1B LTR MaLR -284 106 1 412 269 69 28 chr10 33998362 33998507 -106318258 + MIR SINE MIR 111 261 -1 1864 152 35 3 chr10 33998695 33998985 -106317780 - AluJo SINE Alu -13 299 1 1581 189 39 0 chr10 33999372 33999652 -106317113 + AluJo SINE Alu 1 291 -21 181 259 86 17 chr10 33999682 33999740 -106317025 - MIR SINE MIR -85 123 62 208 245 0 41 chr10 33999997 34000046 -106316719 - L2 LINE L2 -95 3218 3172 197 386 0 0 chr10 34000072 34000160 -106316605 - L2 LINE L2 -219 3053 2966 448 205 83 90 chr10 34000578 34000734 -106316031 + MER112 DNA MER1_type 2 156 -104 424 274 244 0 chr10 34000979 34001180 -106315585 + MIR SINE MIR 12 261 -1 2253 90 3 3 chr10 34002671 34002970 -106313795 + AluSc SINE Alu 1 299 -10 33 66 0 0 chr10 34003779 34003840 -106312925 + GC_rich Low_complexity Low_complexity 1 61 0 323 298 164 46 chr10 34003935 34004173 -106312592 - L1M2a LINE L1 -6222 946 681 278 329 84 17 chr10 34005082 34005248 -106311517 + MIR SINE MIR 17 192 -61 327 294 200 12 chr10 34005342 34005597 -106311168 - L2 LINE L2 -61 3252 2950 723 236 128 0 chr10 34005628 34005823 -106310942 - MIR SINE MIR -21 241 22 735 300 187 19 chr10 34005861 34006384 -106310381 - L2 LINE L2 -388 2926 2316 983 256 0 21 chr10 34006415 34006657 -106310108 - MIR SINE MIR -15 247 11 283 219 55 0 chr10 34006661 34006734 -106310031 - L2 LINE L2 -995 2319 2243 274 326 116 0 chr10 34006876 34006971 -106309794 + L2 LINE L2 3140 3245 -27 30 0 0 0 chr10 34007861 34007891 -106308874 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 34008459 34008488 -106308277 + AT_rich Low_complexity Low_complexity 1 29 0 7710 49 0 2 chr10 34008488 34009775 -106306990 - L1PA5 LINE L1 -3 6151 4869 24 0 0 0 chr10 34009885 34009909 -106306856 + AT_rich Low_complexity Low_complexity 1 24 0 898 208 0 42 chr10 34010324 34010516 -106306249 + MER20 DNA MER1_type 36 219 0 244 308 0 0 chr10 34010521 34010586 -106306179 + CT-rich Low_complexity Low_complexity 3 67 0 2384 68 0 7 chr10 34011101 34011397 -106305368 - AluY SINE Alu -17 294 1 347 336 50 0 chr10 34011429 34011548 -106305217 - MIR SINE MIR -64 198 74 9117 99 25 31 chr10 34012686 34013181 -106303584 - HSMAR1 DNA Mariner 0 1287 791 2355 110 3 0 chr10 34013181 34013489 -106303276 + AluSx SINE Alu 1 309 -3 9117 99 25 31 chr10 34013489 34014287 -106302478 - HSMAR1 DNA Mariner -496 791 1 22 0 0 0 chr10 34014410 34014432 -106302333 + AT_rich Low_complexity Low_complexity 1 22 0 643 115 0 0 chr10 34014600 34014687 -106302078 + AluJ/FRAM SINE Alu 216 302 -10 33 43 0 0 chr10 34014924 34014971 -106301794 + AT_rich Low_complexity Low_complexity 1 47 0 1209 196 75 95 chr10 34015082 34015528 -106301237 + LTR56 LTR ERV1 2 436 -1 268 220 63 58 chr10 34015763 34015869 -106300896 - L1MC/D LINE L1 -708 5453 5375 786 175 34 17 chr10 34015888 34016065 -106300700 + MER53 DNA DNA 7 186 -3 363 317 97 20 chr10 34016077 34016427 -106300338 - L1MC/D LINE L1 -789 5357 4981 798 263 30 0 chr10 34016429 34016627 -106300138 - L2 LINE L2 -455 2859 2656 628 308 43 49 chr10 34016627 34016932 -106299833 + MLT1J LTR MaLR 1 303 -208 234 224 29 80 chr10 34016938 34017112 -106299653 + MLT1J1 LTR MaLR 280 396 -13 742 274 137 4 chr10 34017724 34017979 -106298786 - MLT1I LTR MaLR -49 360 72 726 290 70 48 chr10 34018901 34019323 -106297442 + MLT1J LTR MaLR 72 448 -2 23 0 0 0 chr10 34019547 34019570 -106297195 + AT_rich Low_complexity Low_complexity 1 23 0 1196 223 47 36 chr10 34019687 34019988 -106296777 + MLT1A2 LTR MaLR 3 306 -68 2340 103 0 0 chr10 34020080 34020380 -106296385 - AluSx SINE Alu -12 300 1 188 243 0 14 chr10 34020466 34020536 -106296229 + (TAA)n Simple_repeat Simple_repeat 1 69 0 1382 187 55 52 chr10 34020574 34020863 -106295902 + AluJo SINE Alu 1 290 -22 222 37 0 0 chr10 34020863 34020880 -106295885 + (CA)n Simple_repeat Simple_repeat 1 44 0 222 37 0 0 chr10 34020880 34020907 -106295858 + (CA)n Simple_repeat Simple_repeat 2 28 0 658 280 72 30 chr10 34020928 34021146 -106295619 - MIR SINE MIR 0 262 32 1825 186 30 24 chr10 34021146 34021518 -106295247 + MLT1A2 LTR MaLR 1 374 0 658 280 72 30 chr10 34021518 34021535 -106295230 - MIR SINE MIR -230 32 17 386 296 162 62 chr10 34021591 34022382 -106294383 - L2 LINE L2 -1227 2087 1218 2608 20 0 0 chr10 34022411 34022704 -106294061 - AluYa5 SINE Alu -18 293 1 411 201 67 0 chr10 34022854 34022960 -106293805 - L1MB4 LINE L1 -292 5888 5759 893 152 132 39 chr10 34022960 34023164 -106293601 - AluJo SINE Alu -79 233 11 2687 177 36 16 chr10 34023166 34024050 -106292715 - L1MB4 LINE L1 -419 5764 4855 326 211 0 0 chr10 34024057 34024109 -106292656 + 5S rRNA rRNA 2 53 -68 2497 86 0 0 chr10 34024142 34024444 -106292321 - AluSx SINE Alu -10 302 1 4674 242 36 37 chr10 34024444 34026347 -106290418 - L1M1 LINE L1 -4137 2213 647 3075 271 12 19 chr10 34026405 34027151 -106289614 - L1M1 LINE L1 -5530 751 11 9028 164 96 19 chr10 34027152 34028187 -106288578 - L1MCa LINE L1 -4432 1994 1040 207 0 0 0 chr10 34028187 34028210 -106288555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2083 114 11 0 chr10 34028213 34028493 -106288272 - AluSx SINE Alu -24 288 6 9028 164 96 19 chr10 34028493 34029303 -106287462 - L1MCa LINE L1 -5387 1039 3 1389 198 52 22 chr10 34029463 34029787 -106286978 - Ricksha DNA DNA -1528 518 185 * 3709 139 16 23 chr10 34029638 34030255 -106286510 - HERV16 LTR ERVL -7 5757 5145 10546 50 3 0 chr10 34030270 34032272 -106284493 - L1PA5 LINE L1 0 6154 4148 1178 75 6 0 chr10 34032279 34032438 -106284327 - L1PA5 LINE L1 -3304 2842 2683 * 18799 56 1 3 chr10 34032437 34034794 -106281971 - L1P LINE L1 -1999 4147 1796 1482 177 123 45 chr10 34034794 34035154 -106281611 - MER4E LTR ERV1 -409 494 1 336 392 46 11 chr10 34035248 34035511 -106281254 - HERV16 LTR ERVL -3419 1577 1306 718 325 38 30 chr10 34035541 34036046 -106280719 - HERV16 LTR ERVL -3779 1217 709 250 200 0 0 chr10 34036646 34036691 -106280074 - LTR16C LTR ERVL -12 479 435 2405 86 3 0 chr10 34036692 34036995 -106279770 + AluSp SINE Alu 1 304 -9 569 253 114 15 chr10 34037051 34037253 -106279512 - LTR16C LTR ERVL -59 432 211 415 143 43 0 chr10 34037310 34037380 -106279385 - AluSc SINE Alu -18 291 219 1732 180 14 7 chr10 34038493 34038787 -106277978 - AluJb SINE Alu -16 296 1 746 171 158 7 chr10 34038881 34039033 -106277732 - MER45A DNA AcHobo 0 178 4 339 295 23 8 chr10 34039050 34039179 -106277586 + MIR3 SINE MIR 11 141 -67 527 258 44 22 chr10 34039504 34039686 -106277079 + MARNA DNA Mariner 167 352 -234 425 321 38 19 chr10 34039806 34040015 -106276750 + MARNA DNA Mariner 358 570 -16 2227 109 3 0 chr10 34040057 34040351 -106276414 + AluSp SINE Alu 1 295 -18 2181 118 0 3 chr10 34042423 34042728 -106274037 + AluSx SINE Alu 1 304 -8 241 212 113 13 chr10 34043751 34043844 -106272921 - L1ME2 LINE L1 -222 5923 5824 594 67 0 0 chr10 34044203 34044278 -106272487 + MADE1 DNA Mariner 1 75 -5 1085 302 98 29 chr10 34044308 34045692 -106271073 - L1ME2 LINE L1 -537 5616 4126 265 300 33 7 chr10 34045710 34045860 -106270905 - L1ME2 LINE L1 -3661 2468 2315 301 294 46 61 chr10 34045883 34046080 -106270685 - L1ME2 LINE L1 -4006 2304 2111 3918 249 61 30 chr10 34046082 34047654 -106269111 + L1MEc LINE L1 1658 3280 -2935 2461 83 0 0 chr10 34047654 34047955 -106268810 + AluSg SINE Alu 1 301 -9 3918 249 61 30 chr10 34047955 34048351 -106268414 + L1MEc LINE L1 3280 3662 -2553 1588 245 147 11 chr10 34048347 34048911 -106267854 + L1MEc LINE L1 4051 4691 -1524 * 1628 277 114 59 chr10 34049093 34050445 -106266320 - L1ME2 LINE L1 -4816 1315 2 1241 311 171 26 chr10 34050911 34052202 -106264563 - L2 LINE L2 0 3313 1836 362 200 14 136 chr10 34053864 34054004 -106262761 + L1ME4a LINE L1 5935 6057 -64 2204 97 20 10 chr10 34054014 34054337 -106262428 - AluSx SINE Alu 0 312 1 1724 134 0 4 chr10 34054881 34055135 -106261630 - AluSg SINE Alu -7 303 51 502 243 88 33 chr10 34055248 34055429 -106261336 - MIR SINE MIR -54 208 18 270 0 0 0 chr10 34055625 34055655 -106261110 + (CA)n Simple_repeat Simple_repeat 2 31 0 676 231 68 68 chr10 34056923 34057121 -106259644 + L1ME1 LINE L1 5891 6091 -75 2103 107 48 0 chr10 34057121 34057410 -106259355 + AluSx SINE Alu 3 305 -7 676 231 68 68 chr10 34057410 34057462 -106259303 + L1ME1 LINE L1 6090 6141 -25 1994 128 3 19 chr10 34058613 34058964 -106257801 - MER4A LTR ERV1 0 664 261 644 103 21 10 chr10 34058964 34059061 -106257704 - MER4A LTR ERV1 -566 98 1 206 179 26 0 chr10 34059099 34059138 -106257627 - L3 LINE CR1 -2 1575 1536 500 249 59 102 chr10 34059756 34059889 -106256876 - MER102a DNA MER1_type -1089 328 191 2432 161 41 5 chr10 34059889 34060306 -106256459 + MSTB1 LTR MaLR 1 432 0 500 249 59 102 chr10 34060306 34060442 -106256323 - MER102a DNA MER1_type -1226 191 71 2186 141 0 0 chr10 34060442 34060754 -106256011 - AluSx SINE Alu 0 312 1 500 249 59 102 chr10 34060754 34060788 -106255977 - MER102a DNA MER1_type -1346 71 37 482 304 158 21 chr10 34060833 34061168 -106255597 - L3 LINE CR1 -106 1471 1091 1083 199 41 8 chr10 34061178 34061486 -106255279 - MLT1A1 LTR MaLR 0 365 8 431 292 100 89 chr10 34061498 34061858 -106254907 - L3 LINE CR1 -514 1063 700 420 282 24 0 chr10 34062284 34062408 -106254357 + L1ME LINE L1 7 133 -5937 817 265 119 107 chr10 34062548 34062960 -106253805 - LTR16A LTR ERVL -33 417 1 222 214 11 34 chr10 34063033 34063122 -106253643 + (TA)n Simple_repeat Simple_repeat 2 88 0 1200 186 5 0 chr10 34063164 34063357 -106253408 - MSTA LTR MaLR -234 194 1 306 0 0 0 chr10 34063392 34063426 -106253339 + (CA)n Simple_repeat Simple_repeat 2 35 0 2940 96 73 0 chr10 34063471 34063868 -106252897 + MSTA LTR MaLR 1 426 -2 2277 180 35 64 chr10 34064087 34064588 -106252177 - MLT2B1 LTR ERVL -25 464 1 1838 173 3 10 chr10 34064676 34064977 -106251788 + AluJb SINE Alu 1 299 -13 464 285 96 52 chr10 34065144 34065710 -106251055 + L1ME LINE L1 560 1156 -4914 228 268 98 98 chr10 34065824 34066029 -106250736 - MIR SINE MIR -50 212 8 242 240 110 149 chr10 34067236 34067390 -106249375 + MIR SINE MIR 2 149 -113 1700 171 68 54 chr10 34067513 34067882 -106248883 - MLT1A2 LTR MaLR 0 374 1 328 214 69 92 chr10 34068288 34068419 -106248346 + MIR SINE MIR 126 253 -9 1270 257 29 11 chr10 34068732 34069160 -106247605 - MLT1H1 LTR MaLR -61 481 1 249 336 62 55 chr10 34069292 34069438 -106247327 + L2 LINE L2 3126 3272 0 303 348 70 9 chr10 34069477 34069592 -106247173 + L2 LINE L2 3142 3263 -9 339 85 0 0 chr10 34069981 34070028 -106246737 + (CA)n Simple_repeat Simple_repeat 2 48 0 332 103 0 29 chr10 34072478 34072546 -106244219 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 370 150 14 186 chr10 34072731 34072871 -106243894 - MIR SINE MIR -24 238 123 3258 159 43 19 chr10 34073360 34074045 -106242720 + Tigger7 DNA MER2_type 1 2487 0 6095 228 94 17 chr10 34075074 34077224 -106239541 + L1M4 LINE L1 2 2448 -4377 660 207 69 57 chr10 34077516 34077762 -106239003 - MER112 DNA MER1_type -6 254 6 980 269 121 27 chr10 34077946 34078693 -106238072 + L2 LINE L2 2489 3308 -5 306 341 32 23 chr10 34079087 34079304 -106237461 - MARNA DNA Mariner -151 435 217 563 129 30 0 chr10 34079999 34080131 -106236634 + (TA)n Simple_repeat Simple_repeat 2 137 0 214 241 30 0 chr10 34080250 34080416 -106236349 + (TA)n Simple_repeat Simple_repeat 2 172 0 600 127 0 48 chr10 34080452 34080641 -106236124 + (TA)n Simple_repeat Simple_repeat 1 180 0 4244 215 210 40 chr10 34080656 34081466 -106235299 + L1MDa LINE L1 107 778 -5762 207 0 0 0 chr10 34081466 34081489 -106235276 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4244 215 210 40 chr10 34081489 34081520 -106235245 + L1MDa LINE L1 778 802 -5738 2556 66 0 3 chr10 34081520 34081821 -106234944 - AluY SINE Alu -11 300 1 4244 215 210 40 chr10 34081821 34082496 -106234269 + L1MDa LINE L1 802 1882 -4658 11167 116 19 15 chr10 34082499 34083692 -106233073 - Tigger1 DNA MER2_type -247 2171 984 1781 192 7 0 chr10 34083692 34083994 -106232771 + AluSx SINE Alu 1 304 -8 2391 92 0 0 chr10 34083997 34084292 -106232473 + AluY SINE Alu 1 295 -16 11167 116 19 15 chr10 34084292 34084803 -106231962 - Tigger1 DNA MER2_type -1435 983 456 2619 100 23 18 chr10 34084803 34085194 -106231571 + MSTA-int LTR MaLR 1188 1580 0 1996 166 119 8 chr10 34085194 34085579 -106231186 + MSTA LTR MaLR 1 428 0 2672 173 20 9 chr10 34085579 34086037 -106230728 - Tigger1 DNA MER2_type -1954 464 2 401 214 42 10 chr10 34086039 34086144 -106230621 + L1ME4a LINE L1 5641 5736 -430 409 240 10 0 chr10 34086813 34086909 -106229856 + MIR SINE MIR 55 151 -111 1934 172 20 20 chr10 34088412 34088802 -106227963 - MLT1B LTR MaLR 0 390 1 2225 116 7 3 chr10 34088829 34089139 -106227626 - AluSq SINE Alu -2 311 1 353 288 147 18 chr10 34089216 34089379 -106227386 - MIR SINE MIR -78 184 1 2242 109 6 3 chr10 34089608 34089919 -106226846 + AluSx SINE Alu 1 312 0 239 319 26 9 chr10 34089922 34090029 -106226736 + L1ME4a LINE L1 5815 5924 -192 216 0 0 0 chr10 34090029 34090053 -106226712 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 321 219 0 117 chr10 34090076 34090204 -106226561 + L1ME4a LINE L1 6009 6121 0 180 245 20 0 chr10 34091033 34091082 -106225683 - MIR3 SINE MIR -8 200 151 205 303 83 18 chr10 34091265 34091374 -106225391 - MIR SINE MIR -73 135 20 216 257 138 18 chr10 34092201 34092310 -106224455 - L2 LINE L2 -227 3045 2924 884 200 43 0 chr10 34094912 34095102 -106221663 + MSTA-int LTR MaLR 32 229 -1477 1714 152 156 9 chr10 34095102 34095417 -106221348 + MSTA LTR MaLR 68 428 0 9780 129 7 54 chr10 34095419 34097074 -106219691 + MSTA-int LTR MaLR 3 1579 -1 742 158 211 7 chr10 34097075 34097227 -106219538 + MSTA LTR MaLR 1 183 -245 1537 109 101 16 chr10 34097461 34097708 -106219057 + MSTA LTR MaLR 161 428 0 1095 233 24 12 chr10 34097708 34097961 -106218804 + MLT-int LTR MaLR 387 642 -1093 322 270 36 36 chr10 34098218 34098329 -106218436 - L2 LINE L2 0 3313 3203 282 160 0 0 chr10 34099584 34099634 -106217131 + (CA)n Simple_repeat Simple_repeat 2 51 0 269 277 31 39 chr10 34099756 34099886 -106216879 + L2 LINE L2 2925 3053 -219 770 187 0 0 chr10 34102184 34102318 -106214447 + MER94 DNA DNA 1 134 0 2009 130 7 21 chr10 34103659 34103944 -106212821 + AluSx SINE Alu 1 281 -31 207 69 0 0 chr10 34103947 34103976 -106212789 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 541 297 54 58 chr10 34104460 34104887 -106211878 + L1MCc LINE L1 14 438 -5985 963 263 103 41 chr10 34105393 34106085 -106210680 + L1MCc LINE L1 1262 2003 -4893 1838 168 0 0 chr10 34106085 34106371 -106210394 + AluJb SINE Alu 20 305 -7 1696 82 24 4 chr10 34106448 34106703 -106210062 - L1MA2 LINE L1 0 6304 6045 43112 56 5 1 chr10 34106703 34112813 -106203952 - L1PA5 LINE L1 -9 6145 11 542 213 49 129 chr10 34112812 34113131 -106203634 + L1M2 LINE L1 1564 1924 -4292 * 240 111 0 0 chr10 34113131 34113176 -106203589 + (TG)n Simple_repeat Simple_repeat 2 46 0 542 213 49 129 chr10 34113176 34113220 -106203545 + L1M2 LINE L1 1924 1970 -4246 2086 135 3 0 chr10 34113235 34113524 -106203241 + AluSx SINE Alu 9 298 -14 253 271 140 0 chr10 34113542 34113649 -106203116 + L1MCc LINE L1 2570 2691 -4431 552 279 35 35 chr10 34113659 34113831 -106202934 + MLT1J LTR MaLR 184 355 -156 1984 151 6 22 chr10 34115043 34115390 -106201375 + AluSx SINE Alu 1 342 0 434 282 151 62 chr10 34115683 34115995 -106200770 + MLT1L LTR MaLR 3 286 -329 1661 160 43 43 chr10 34115995 34116295 -106200470 + AluJo SINE Alu 1 300 -12 434 282 151 62 chr10 34116295 34116545 -106200220 + MLT1L LTR MaLR 286 615 0 399 287 44 7 chr10 34117550 34117686 -106199079 + MIR SINE MIR 47 187 -75 2396 82 7 0 chr10 34117914 34118217 -106198548 + AluSp SINE Alu 1 305 -8 216 274 0 16 chr10 34118863 34118925 -106197840 + GA-rich Low_complexity Low_complexity 5 65 0 21 36 0 0 chr10 34119092 34119120 -106197645 + AT_rich Low_complexity Low_complexity 1 28 0 1502 191 70 0 chr10 34119120 34119393 -106197372 + AluJo SINE Alu 1 292 -20 658 205 38 102 chr10 34119468 34119761 -106197004 + L1ME4a LINE L1 5672 5945 -176 1819 155 50 83 chr10 34120414 34120578 -106196187 + MLT1D LTR MaLR 1 169 -336 2132 142 0 0 chr10 34120578 34120873 -106195892 - AluSx SINE Alu -17 295 1 1819 155 50 83 chr10 34120873 34120908 -106195857 + MLT1D LTR MaLR 169 204 -301 2109 187 72 119 chr10 34120908 34121671 -106195094 + LTR8A LTR ERV1 1 727 0 1819 155 50 83 chr10 34121671 34121869 -106194896 + MLT1D LTR MaLR 204 386 -119 * 3738 125 36 0 chr10 34121851 34122436 -106194329 + LTR24C LTR ERV1 30 635 0 255 132 0 0 chr10 34122436 34122474 -106194291 + MLT1D LTR MaLR 468 505 0 181 274 48 0 chr10 34122493 34122555 -106194210 + MIR SINE MIR 124 188 -74 1134 150 0 99 chr10 34122736 34122969 -106193796 + AluJo SINE Alu 90 299 -13 283 211 0 0 chr10 34123028 34123106 -106193659 - MIR SINE MIR -64 144 66 295 346 13 26 chr10 34123169 34123322 -106193443 - MER5A DNA MER1_type -32 157 7 331 246 132 54 chr10 34123423 34123756 -106193009 - L1MC4 LINE L1 -2 8040 7682 196 254 0 60 chr10 34124121 34124188 -106192577 + L2 LINE L2 2427 2489 -825 206 287 30 20 chr10 34124379 34124480 -106192285 + L2 LINE L2 2719 2820 -494 757 333 47 43 chr10 34124989 34125186 -106191579 + L2 LINE L2 2188 2383 -931 2608 139 25 28 chr10 34125186 34125431 -106191334 - MSTB1 LTR MaLR 0 432 187 225 0 0 0 chr10 34125431 34125456 -106191309 + (TG)n Simple_repeat Simple_repeat 2 26 0 2608 139 25 28 chr10 34125456 34125642 -106191123 - MSTB1 LTR MaLR -245 187 2 757 333 47 43 chr10 34125642 34125978 -106190787 + L2 LINE L2 2383 2723 -591 4226 89 11 101 chr10 34126635 34127365 -106189400 + MER4A LTR ERV1 1 664 0 2325 116 73 14 chr10 34128433 34128777 -106187988 - THE1B LTR MaLR 0 364 1 11205 84 5 0 chr10 34128777 34130267 -106186498 - THE1B-int LTR MaLR 0 1580 84 1958 147 75 15 chr10 34130271 34130604 -106186161 - THE1B LTR MaLR -11 353 1 1196 284 108 33 chr10 34130856 34131339 -106185426 + LTR33 LTR ERVL 1 519 -2 1873 122 3 52 chr10 34131818 34132147 -106184618 - MER4E LTR ERV1 -1 778 466 1223 131 10 10 chr10 34132194 34132393 -106184372 - MER4B LTR ERV1 -411 199 1 960 344 99 29 chr10 34132454 34133464 -106183301 + ERVL LTR ERVL 861 1941 -3823 * 1644 306 54 34 chr10 34133462 34134403 -106182362 + ERVL LTR ERVL 1906 2935 -2111 2051 150 127 18 chr10 34134649 34135035 -106181730 + MSTA LTR MaLR 1 428 0 398 312 24 29 chr10 34135089 34135261 -106181504 + ERVL LTR ERVL 3234 3457 -2244 1610 206 48 25 chr10 34135285 34135678 -106181087 + MLT2D LTR ERVL 1 402 -12 890 273 18 4 chr10 34135875 34136150 -106180615 + ERVL LTR ERVL 3767 4045 -1719 530 309 77 42 chr10 34136242 34136284 -106180481 + ERVL LTR ERVL 4264 4303 -1461 2472 169 20 2 chr10 34136284 34136692 -106180073 - MER47B DNA MER2_type -3 415 1 530 309 77 42 chr10 34136692 34136934 -106179831 + ERVL LTR ERVL 4303 4558 -1206 1918 151 0 35 chr10 34136939 34137250 -106179515 - AluJb SINE Alu -7 305 6 989 290 94 18 chr10 34137916 34138309 -106178456 + LTR33 LTR ERVL 44 466 -55 1974 152 0 7 chr10 34138310 34138606 -106178159 + AluJo SINE Alu 1 294 -18 226 161 71 0 chr10 34139678 34139790 -106176975 + (TA)n Simple_repeat Simple_repeat 1 120 0 342 0 0 0 chr10 34140126 34140164 -106176601 + (CA)n Simple_repeat Simple_repeat 2 39 0 809 268 17 21 chr10 34140435 34140726 -106176039 + L1ME3A LINE L1 5876 6165 -5 235 310 34 96 chr10 34140759 34141015 -106175750 + L3 LINE CR1 857 1090 -487 2278 89 38 0 chr10 34141015 34141307 -106175458 - AluSp SINE Alu -10 303 1 235 310 34 96 chr10 34141307 34141373 -106175392 + L3 LINE CR1 1090 1159 -418 2462 83 0 3 chr10 34141636 34141938 -106174827 + AluSq SINE Alu 1 301 -12 1727 157 9 63 chr10 34143885 34144204 -106172561 + AluJo SINE Alu 4 305 -7 303 28 0 0 chr10 34145036 34145072 -106171693 + (CA)n Simple_repeat Simple_repeat 1 36 0 1817 168 18 0 chr10 34146135 34146462 -106170303 + MLT1B LTR MaLR 1 333 -57 262 250 50 86 chr10 34146772 34146806 -106169959 - MER5B DNA MER1_type -31 158 124 1667 179 17 10 chr10 34146806 34147103 -106169662 + AluJo SINE Alu 1 299 -13 262 250 50 86 chr10 34147103 34147218 -106169547 - MER5B DNA MER1_type -65 124 1 1821 97 0 0 chr10 34147341 34147567 -106169198 - AluSg/x SINE Alu -5 307 82 427 306 65 48 chr10 34147638 34147824 -106168941 - MIR3 SINE MIR 0 208 20 266 264 222 21 chr10 34147929 34148073 -106168692 - MIR SINE MIR -62 200 28 716 308 112 39 chr10 34148744 34149041 -106167724 - L2 LINE L2 0 3313 2968 553 141 11 0 chr10 34149041 34149133 -106167632 - HY4 scRNA scRNA 0 93 1 716 308 112 39 chr10 34149133 34149300 -106167465 - L2 LINE L2 -345 2968 2815 353 319 106 6 chr10 34149340 34149500 -106167265 - L2 LINE L2 -645 2669 2494 183 281 35 0 chr10 34149671 34149728 -106167037 + MIR SINE MIR 54 112 -150 562 250 79 18 chr10 34149783 34149986 -106166779 + MIR SINE MIR 1 214 -48 1053 65 7 0 chr10 34151346 34151484 -106165281 + L1MA3 LINE L1 6164 6302 -3 788 165 8 0 chr10 34151781 34151908 -106164857 + FLAM_A SINE Alu 2 129 -4 24 0 0 0 chr10 34151908 34151932 -106164833 + AT_rich Low_complexity Low_complexity 1 24 0 650 286 71 43 chr10 34152704 34153054 -106163711 + L2 LINE L2 2859 3218 -95 2076 116 3 23 chr10 34153057 34153359 -106163406 - AluSx SINE Alu -16 296 1 354 294 151 8 chr10 34153976 34154102 -106162663 - MIR3 SINE MIR -22 186 43 882 102 17 0 chr10 34154254 34154372 -106162393 - FLAM_C SINE Alu -17 126 7 356 161 0 5 chr10 34154694 34154788 -106161977 - FLAM_A SINE Alu 0 146 63 417 297 121 11 chr10 34155055 34155237 -106161528 + MIR SINE MIR 47 248 -14 1987 148 3 0 chr10 34155394 34155685 -106161080 - AluSx SINE Alu -6 306 15 1948 175 16 60 chr10 34155738 34156172 -106160593 + MLT1C LTR MaLR 36 450 -17 1734 180 166 0 chr10 34156172 34156539 -106160226 - MSTA LTR MaLR 0 428 1 1417 212 52 17 chr10 34156618 34156967 -106159798 + MER63 DNA MER1_type 682 1042 -19 379 340 57 31 chr10 34157933 34158127 -106158638 + MIR SINE MIR 62 260 -2 207 100 0 0 chr10 34158127 34158157 -106158608 + (GGA)n Simple_repeat Simple_repeat 1 30 0 4989 201 24 9 chr10 34158586 34159769 -106156996 + L1 LINE L1 4075 5274 -872 772 209 92 34 chr10 34160483 34160689 -106156076 + MER20 DNA MER1_type 2 219 0 193 298 43 32 chr10 34160781 34160875 -106155890 + L2 LINE L2 3161 3255 -17 2187 123 7 0 chr10 34161024 34161325 -106155440 - AluSg1 SINE Alu -6 303 1 2166 112 0 11 chr10 34161341 34161628 -106155137 - AluSx SINE Alu -28 284 1 2284 95 3 3 chr10 34161717 34162021 -106154744 - AluSx SINE Alu -8 304 1 1280 161 24 0 chr10 34162029 34162240 -106154525 - Tigger3(Golem) DNA MER2_type -2813 216 1 202 225 39 39 chr10 34162438 34162567 -106154198 + G-rich Low_complexity Low_complexity 2 130 0 222 339 189 0 chr10 34163398 34163525 -106153240 + MIR3 SINE MIR 47 197 -11 404 262 99 0 chr10 34163769 34163910 -106152855 - MIR3 SINE MIR -5 203 49 1738 177 0 3 chr10 34164343 34164625 -106152140 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 34164628 34164713 -106152052 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 252 70 0 70 chr10 34165176 34165219 -106151546 + AluJ/FLAM SINE Alu 21 60 -242 440 215 11 11 chr10 34165219 34165312 -106151453 - AluJo SINE Alu -133 179 87 2446 80 0 43 chr10 34165500 34165873 -106150892 - MER4A LTR ERV1 -307 357 1 2110 153 0 7 chr10 34166055 34166356 -106150409 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 34166360 34166384 -106150381 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 34166568 34166656 -106150109 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2207 181 12 5 chr10 34166673 34166860 -106149905 + MSTB LTR MaLR 14 198 -228 5220 46 16 0 chr10 34166860 34167487 -106149278 + L1PA8 LINE L1 5532 6168 -4 2207 181 12 5 chr10 34167487 34167709 -106149056 + MSTB LTR MaLR 198 426 0 424 268 38 65 chr10 34169084 34169345 -106147420 + L1ME4a LINE L1 5509 5762 -359 739 250 196 19 chr10 34169376 34169943 -106146822 - Charlie7 DNA MER1_type -23 2589 1923 2557 88 0 0 chr10 34169968 34170299 -106146466 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 34170301 34170345 -106146420 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2066 117 7 3 chr10 34170345 34170627 -106146138 - AluSx SINE Alu -29 283 1 373 263 59 7 chr10 34170630 34170782 -106145983 + Charlie7 DNA MER1_type 1396 1555 -1057 1416 122 0 0 chr10 34170803 34171011 -106145754 + AluSq SINE Alu 95 302 0 1159 254 16 0 chr10 34171059 34171315 -106145450 - MIR SINE MIR -2 260 1 2251 233 187 40 chr10 34171341 34171651 -106145114 - Charlie7 DNA MER1_type -1296 1316 1053 2288 105 0 16 chr10 34171651 34171965 -106144800 - AluSq SINE Alu -2 311 3 1952 158 3 0 chr10 34171970 34172261 -106144504 - AluJb SINE Alu -20 292 1 2251 233 187 40 chr10 34172261 34172745 -106144020 - Charlie7 DNA MER1_type -1562 1050 638 1038 127 0 58 chr10 34172745 34172783 -106143982 - L1PB4 LINE L1 -1 6155 6116 1907 136 4 0 chr10 34172783 34173048 -106143717 - AluSx SINE Alu -12 300 35 1038 127 0 58 chr10 34173048 34173198 -106143567 - L1PB4 LINE L1 -40 6116 5978 2251 233 187 40 chr10 34173198 34173510 -106143255 - Charlie7 DNA MER1_type -1974 638 40 259 278 43 9 chr10 34173529 34173644 -106143121 + L1ME4a LINE L1 5791 5909 -212 1723 172 111 18 chr10 34173812 34174207 -106142558 + MSTB1 LTR MaLR 1 432 0 1113 97 0 7 chr10 34174640 34174785 -106141980 + FRAM SINE Alu 1 140 -36 2185 135 0 0 chr10 34175233 34175537 -106141228 - AluSx SINE Alu 0 312 9 1046 115 0 0 chr10 34175539 34175678 -106141087 - AluSq/x SINE Alu -173 139 1 1563 180 20 39 chr10 34175743 34176048 -106140717 + AluJo SINE Alu 1 299 -13 636 252 19 48 chr10 34176123 34176333 -106140432 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 34176777 34176902 -106139863 + (TG)n Simple_repeat Simple_repeat 2 126 0 195 333 146 10 chr10 34177954 34178050 -106138715 - MIR SINE MIR -76 132 24 444 125 102 0 chr10 34178623 34178711 -106138054 + L1MB3 LINE L1 6080 6176 -7 1745 197 0 16 chr10 34178714 34179029 -106137736 - AluJo SINE Alu 0 312 3 1979 105 87 19 chr10 34179029 34179352 -106137413 + THE1B LTR MaLR 1 345 -19 1681 83 5 14 chr10 34179754 34179970 -106136795 + AluSq SINE Alu 1 214 -99 1491 163 4 0 chr10 34179977 34180204 -106136561 - AluJb SINE Alu -82 230 3 693 138 50 50 chr10 34180206 34180365 -106136400 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 34180494 34180528 -106136237 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 34180527 34180550 -106136215 + (TC)n Simple_repeat Simple_repeat 2 24 0 724 130 16 32 chr10 34180550 34180673 -106136092 - AluSx SINE Alu -10 299 179 279 44 267 0 chr10 34180674 34180719 -106136046 + AluSg/x SINE Alu 138 194 -106 1322 106 0 32 chr10 34180720 34180908 -106135857 - AluSx SINE Alu -130 182 1 269 300 107 104 chr10 34181510 34181960 -106134805 + L2 LINE L2 2822 3272 0 244 280 121 51 chr10 34181961 34182118 -106134647 + MIR SINE MIR 24 191 -71 1997 137 7 10 chr10 34182123 34182415 -106134350 + AluSx SINE Alu 1 291 -21 526 278 31 19 chr10 34182493 34182655 -106134110 - MIR SINE MIR -4 258 95 1915 162 0 7 chr10 34182679 34182987 -106133778 + AluJo SINE Alu 1 306 -6 767 151 0 8 chr10 34183004 34183123 -106133642 + FLAM_C SINE Alu 1 118 -15 1491 174 89 0 chr10 34184625 34184907 -106131858 - AluJo SINE Alu -3 309 3 999 135 22 17 chr10 34185395 34185573 -106131192 + L1PA16 LINE L1 5979 6157 -9 21 82 0 0 chr10 34186307 34186356 -106130409 + AT_rich Low_complexity Low_complexity 1 49 0 4099 194 118 33 chr10 34186431 34187390 -106129375 - Charlie1 DNA MER1_type 0 2761 1885 1990 144 0 0 chr10 34187390 34187681 -106129084 + AluJb SINE Alu 1 291 -21 4099 194 118 33 chr10 34187681 34187729 -106129036 - Charlie1 DNA MER1_type -876 1885 1842 2321 108 0 13 chr10 34187729 34188043 -106128722 + AluSg SINE Alu 1 310 0 4099 194 118 33 chr10 34188043 34188211 -106128554 - Charlie1 DNA MER1_type -919 1842 1485 1110 202 226 48 chr10 34188213 34188791 -106127974 + L1MC4 LINE L1 6261 6359 0 241 182 68 68 chr10 34188866 34188954 -106127811 + L1MC4a LINE L1 6052 6139 -1669 1226 183 128 22 chr10 34188967 34189240 -106127525 - AluJo SINE Alu -8 304 3 1878 139 0 4 chr10 34189273 34189553 -106127212 - AluJo SINE Alu -23 289 11 520 292 119 43 chr10 34189839 34190135 -106126630 - L1M4 LINE L1 -2916 3230 2958 1892 163 3 6 chr10 34190135 34190448 -106126317 - AluJo SINE Alu 0 312 1 520 292 119 43 chr10 34190448 34190662 -106126103 - L1M4 LINE L1 -3188 2958 2681 840 107 0 8 chr10 34190881 34191002 -106125763 - AluSg/x SINE Alu -17 293 174 272 262 49 25 chr10 34191012 34191134 -106125631 - HAL1b LINE L1 -539 809 685 316 244 156 19 chr10 34191187 34191347 -106125418 - L1ME3A LINE L1 -182 6057 5876 4954 257 116 28 chr10 34191377 34191467 -106125298 - L1MEc LINE L1 -1303 4912 4831 1451 110 13 31 chr10 34191467 34191695 -106125070 + MER30 DNA MER1_type 4 227 -3 4954 257 116 28 chr10 34191695 34191852 -106124913 - L1MEc LINE L1 -1384 4831 4689 2419 66 10 0 chr10 34191852 34192157 -106124608 - AluY SINE Alu -3 308 1 4954 257 116 28 chr10 34192157 34194237 -106122528 - L1MEc LINE L1 -1526 4689 2376 2038 125 4 0 chr10 34194237 34194549 -106122216 + AluSx SINE Alu 1 313 0 4954 257 116 28 chr10 34194549 34194756 -106122009 - L1MEc LINE L1 -3839 2376 2189 2798 90 29 0 chr10 34194924 34195334 -106121431 - L1PA13 LINE L1 0 6163 5742 225 0 0 0 chr10 34195447 34195472 -106121293 + (CA)n Simple_repeat Simple_repeat 2 26 0 449 282 148 37 chr10 34195642 34196032 -106120733 - L1MEc LINE L1 -4677 1540 1195 180 0 0 0 chr10 34196032 34196052 -106120713 + (TTA)n Simple_repeat Simple_repeat 2 21 0 449 282 148 37 chr10 34196052 34196460 -106120305 - L1MEc LINE L1 -5022 1195 791 435 204 88 18 chr10 34196535 34196648 -106120117 - L1ME2 LINE L1 -8 6156 6036 466 237 53 0 chr10 34196683 34196835 -106119930 + L1ME1 LINE L1 5733 5892 -274 1955 108 22 4 chr10 34196847 34197163 -106119602 + AluSx SINE Alu 1 321 0 467 327 149 18 chr10 34197236 34197572 -106119193 - L3 LINE CR1 -805 772 393 1998 130 0 0 chr10 34197826 34198152 -106118613 + AluSx SINE Alu 1 326 0 914 155 113 36 chr10 34198428 34198622 -106118143 + MER2 DNA MER2_type 1 209 -136 232 233 100 0 chr10 34198668 34198728 -106118037 + MER2 DNA MER2_type 280 345 0 245 61 0 0 chr10 34199697 34199730 -106117035 + MER63C DNA MER1_type 1 33 -897 2623 181 91 16 chr10 34199778 34200396 -106116369 + MER63C DNA MER1_type 131 794 -136 1889 232 95 54 chr10 34200434 34200784 -106115981 - L1MC5 LINE L1 -455 7506 7172 2516 53 0 3 chr10 34200784 34201088 -106115677 - AluY SINE Alu -8 303 1 1889 232 95 54 chr10 34201088 34201691 -106115074 - L1MC5 LINE L1 -789 7172 6518 22 35 0 0 chr10 34203656 34203685 -106113080 + AT_rich Low_complexity Low_complexity 1 29 0 255 317 0 12 chr10 34203794 34203876 -106112889 + Charlie5 DNA MER1_type 2 82 -2530 2018 61 0 27 chr10 34203876 34204137 -106112628 - AluY SINE Alu -21 290 37 2183 152 77 34 chr10 34204176 34204766 -106111999 - L1MB3 LINE L1 -519 5664 5068 * 2361 140 110 7 chr10 34204759 34205222 -106111543 + L1MB3 LINE L1 5666 6176 -7 257 152 0 22 chr10 34205223 34205269 -106111496 + Charlie5 DNA MER1_type 163 207 -2405 * 267 176 0 20 chr10 34205231 34205282 -106111483 - MER3 DNA MER1_type -123 86 37 362 229 110 28 chr10 34205683 34205792 -106110973 + MIR3 SINE MIR 68 185 -23 1694 164 67 12 chr10 34205850 34206180 -106110585 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 34206648 34206671 -106110094 + GC_rich Low_complexity Low_complexity 1 23 0 2226 88 14 7 chr10 34207531 34207828 -106108937 - AluSq SINE Alu -14 299 1 333 0 0 0 chr10 34208506 34208543 -106108222 + (CA)n Simple_repeat Simple_repeat 1 37 0 418 286 134 52 chr10 34211246 34211477 -106105288 - MIR SINE MIR -9 253 4 482 317 145 38 chr10 34213804 34214148 -106102617 + L2 LINE L2 2918 3298 -15 21 36 0 0 chr10 34214400 34214428 -106102337 + AT_rich Low_complexity Low_complexity 1 28 0 1609 168 58 3 chr10 34214521 34214812 -106101953 - AluJo SINE Alu -5 307 1 2207 107 0 22 chr10 34217690 34218009 -106098756 + AluSx SINE Alu 1 312 0 1350 277 85 9 chr10 34218101 34218664 -106098101 - L1M3 LINE L1 -1125 5021 4416 2052 126 7 7 chr10 34218725 34219026 -106097739 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 34219027 34219069 -106097696 + (TG)n Simple_repeat Simple_repeat 2 43 0 957 145 33 0 chr10 34219924 34220076 -106096689 + FRAM SINE Alu 1 157 -9 563 245 14 0 chr10 34221587 34221730 -106095035 + MER103 DNA DNA 21 165 -1 41 0 0 0 chr10 34221979 34222020 -106094745 + AT_rich Low_complexity Low_complexity 1 41 0 909 279 84 43 chr10 34222279 34222766 -106093999 + MLT1H LTR MaLR 43 549 0 544 181 16 8 chr10 34222811 34222938 -106093827 - L1MC2 LINE L1 -2 6342 6215 234 0 0 0 chr10 34223571 34223597 -106093168 + (TA)n Simple_repeat Simple_repeat 1 26 0 516 292 92 24 chr10 34223597 34223847 -106092918 + L1MC/D LINE L1 5426 5692 -2116 654 164 185 14 chr10 34225670 34225816 -106090949 + MER20 DNA MER1_type 19 189 -30 307 269 160 17 chr10 34225962 34226081 -106090684 + L2 LINE L2 3126 3261 -11 186 71 0 0 chr10 34226081 34226109 -106090656 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 21 0 0 0 chr10 34227446 34227467 -106089298 + AT_rich Low_complexity Low_complexity 1 21 0 512 257 73 90 chr10 34228339 34228584 -106088181 + MIR SINE MIR 21 261 -1 183 386 80 31 chr10 34230062 34230225 -106086540 + L2 LINE L2 3087 3257 -15 2561 58 0 6 chr10 34230368 34230679 -106086086 + AluY SINE Alu 1 309 -2 278 228 74 34 chr10 34231079 34231228 -106085537 - L1MEd LINE L1 -3866 2263 2109 814 204 65 48 chr10 34231493 34231723 -106085042 + Charlie1 DNA MER1_type 1708 1941 -820 2236 96 0 0 chr10 34231728 34232039 -106084726 + AluSx SINE Alu 1 311 0 1458 179 65 10 chr10 34232045 34232353 -106084412 + L1MB2 LINE L1 5843 6167 -4 2810 199 102 21 chr10 34232353 34233126 -106083639 + Charlie1 DNA MER1_type 1925 2760 -1 501 255 117 77 chr10 34233585 34234141 -106082624 + L1MC4a LINE L1 5296 5873 -1935 370 311 92 0 chr10 34236835 34236999 -106079766 + MIR SINE MIR 83 261 -1 668 313 30 27 chr10 34237116 34237522 -106079243 - L1M4 LINE L1 -867 5279 4873 1018 206 0 5 chr10 34237570 34237764 -106079001 - AluJo SINE Alu -20 292 100 440 280 170 42 chr10 34237874 34238498 -106078267 - L1M4 LINE L1 -1445 4701 3998 1975 166 0 0 chr10 34238532 34238834 -106077931 + AluSx SINE Alu 3 304 -8 4998 200 102 33 chr10 34238835 34240485 -106076280 - L1MDb LINE L1 -3899 2507 749 225 256 48 104 chr10 34240990 34241115 -106075650 - MLT1H LTR MaLR -203 346 229 478 280 38 40 chr10 34241299 34241609 -106075156 - L1MEd LINE L1 -1033 1457 1048 2116 99 49 0 chr10 34241818 34242102 -106074663 + AluSg SINE Alu 1 298 -12 25 51 0 0 chr10 34243239 34243278 -106073487 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 34244131 34244155 -106072610 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 34245645 34245668 -106071097 + AT_rich Low_complexity Low_complexity 1 23 0 2076 76 60 33 chr10 34245754 34246055 -106070710 - AluSp SINE Alu -4 309 1 805 147 0 0 chr10 34247874 34247990 -106068775 + FLAM_C SINE Alu 1 116 -17 365 70 18 0 chr10 34248013 34248070 -106068695 + (GGA)n Simple_repeat Simple_repeat 3 60 0 22 0 0 0 chr10 34249401 34249423 -106067342 + AT_rich Low_complexity Low_complexity 1 22 0 252 354 121 39 chr10 34249445 34250084 -106066681 + L1MEd LINE L1 134 824 -5295 405 238 78 122 chr10 34250088 34250521 -106066244 + L1MC4 LINE L1 7625 8038 -4 427 276 91 41 chr10 34250643 34251122 -106065643 + L1MEd LINE L1 1065 1608 -4702 1751 166 3 7 chr10 34251153 34251436 -106065329 + AluJo SINE Alu 1 282 -30 602 197 0 57 chr10 34251668 34251790 -106064975 + FLAM_A SINE Alu 1 115 -18 541 173 55 9 chr10 34251791 34251901 -106064864 - MER20 DNA MER1_type -88 131 17 740 276 180 43 chr10 34251972 34252571 -106064194 + HAL1 LINE L1 44 724 -1783 830 184 24 12 chr10 34252605 34252773 -106063992 + HAL1 LINE L1 1544 1713 -794 2006 101 83 0 chr10 34253025 34253303 -106063462 - AluSx SINE Alu -11 301 1 1293 174 114 23 chr10 34254030 34254294 -106062471 + AluJo SINE Alu 1 288 -24 632 282 41 12 chr10 34255131 34255301 -106061464 + MIR3 SINE MIR 28 202 -6 22 0 0 0 chr10 34255608 34255630 -106061135 + AT_rich Low_complexity Low_complexity 1 22 0 851 209 47 28 chr10 34255798 34255928 -106060837 - MER20 DNA MER1_type 0 219 82 462 18 0 0 chr10 34255928 34255983 -106060782 + (CA)n Simple_repeat Simple_repeat 1 55 0 851 209 47 28 chr10 34255983 34256067 -106060698 - MER20 DNA MER1_type -137 82 1 342 283 138 13 chr10 34256773 34256932 -106059833 + L1M4 LINE L1 3599 3777 -2369 328 257 20 0 chr10 34257006 34257107 -106059658 + L1M4 LINE L1 3890 3992 -2154 223 295 33 0 chr10 34257754 34257815 -106058950 + L2 LINE L2 3250 3312 -1 226 325 148 48 chr10 34258401 34258825 -106057940 - L2 LINE L2 -557 2757 2231 2328 74 0 10 chr10 34258825 34259124 -106057641 + AluY SINE Alu 1 296 -15 226 325 148 48 chr10 34259124 34259213 -106057552 - L2 LINE L2 -1083 2231 2152 427 310 101 12 chr10 34259525 34259783 -106056982 + L1MEc LINE L1 34 314 -6082 2156 84 3 20 chr10 34259852 34260148 -106056617 - AluSp SINE Alu -20 293 3 674 135 0 0 chr10 34260336 34260440 -106056325 - AluSg/x SINE Alu -2 307 204 551 271 152 20 chr10 34260812 34261111 -106055654 + L1ME LINE L1 5489 5780 -341 2083 103 17 10 chr10 34261149 34261440 -106055325 + AluSx SINE Alu 1 293 -19 239 138 138 35 chr10 34261774 34261832 -106054933 - MER5A DNA MER1_type -24 165 102 1660 152 67 0 chr10 34261885 34262155 -106054610 + AluJo SINE Alu 1 288 -24 1981 144 0 0 chr10 34262486 34262792 -106053973 + AluSx SINE Alu 1 306 0 2177 105 7 3 chr10 34263454 34263760 -106053005 - AluSp SINE Alu -6 307 1 24 0 0 0 chr10 34263760 34263784 -106052981 + AT_rich Low_complexity Low_complexity 1 24 0 215 352 59 73 chr10 34264145 34264432 -106052333 - L2 LINE L2 -44 3228 2946 305 355 65 0 chr10 34265274 34265398 -106051367 + L2 LINE L2 3136 3267 -5 188 328 139 34 chr10 34265439 34266065 -106050700 + L2 LINE L2 2167 2858 -456 1589 182 75 0 chr10 34266288 34266646 -106050119 - Charlie5 DNA MER1_type 0 2618 2234 534 172 40 8 chr10 34266640 34266778 -106049987 - Charlie5 DNA MER1_type -2496 116 1 * 221 366 24 24 chr10 34266791 34266873 -106049892 + L2 LINE L2 3137 3218 -54 2363 97 0 0 chr10 34267925 34268234 -106048531 + AluSx SINE Alu 3 311 -1 2687 128 103 8 chr10 34268899 34269393 -106047372 - L1MB3 LINE L1 -6 6177 5637 1881 139 33 3 chr10 34269467 34269770 -106046995 + AluSx SINE Alu 1 312 0 1421 183 103 0 chr10 34271041 34271314 -106045451 + AluJb SINE Alu 1 301 -11 493 290 112 23 chr10 34271560 34271774 -106044991 + Tigger8 DNA MER2_type 25 257 -409 1081 209 32 18 chr10 34271838 34272058 -106044707 + MER58A DNA MER1_type 2 224 0 1515 154 108 4 chr10 34272360 34272619 -106044146 + AluJb SINE Alu 1 286 -26 28 48 0 0 chr10 34272703 34272745 -106044020 + AT_rich Low_complexity Low_complexity 1 42 0 265 366 0 0 chr10 34273288 34273370 -106043395 + L2 LINE L2 3191 3272 0 761 188 8 0 chr10 34273560 34273688 -106043077 + FLAM_C SINE Alu 3 131 -12 1267 172 35 18 chr10 34274016 34274243 -106042522 + AluJb SINE Alu 1 231 -81 325 200 0 0 chr10 34274293 34274348 -106042417 - AluJb SINE Alu -89 213 159 201 74 0 0 chr10 34274380 34274407 -106042358 + (A)n Simple_repeat Simple_repeat 1 27 0 207 286 14 71 chr10 34274892 34274962 -106041803 - MIR SINE MIR -196 66 1 2461 11 0 0 chr10 34275147 34275415 -106041350 - AluYa5 SINE Alu -13 298 31 2193 125 0 6 chr10 34275764 34276075 -106040690 + AluSg SINE Alu 1 309 -1 2375 88 3 0 chr10 34276245 34276540 -106040225 + AluSp SINE Alu 1 296 -17 1843 169 0 10 chr10 34276945 34277246 -106039519 - AluJb SINE Alu -14 298 1 23 33 0 0 chr10 34277325 34277355 -106039410 + AT_rich Low_complexity Low_complexity 1 30 0 2870 154 113 92 chr10 34277404 34278187 -106038578 - Charlie1 DNA MER1_type -63 2698 1892 800 124 8 0 chr10 34278187 34278308 -106038457 - L1MA1 LINE L1 0 6302 6181 2870 154 113 92 chr10 34278308 34278414 -106038351 - Charlie1 DNA MER1_type -869 1892 1790 2175 121 0 0 chr10 34278768 34279065 -106037700 + AluSx SINE Alu 1 297 -15 1774 170 13 113 chr10 34280217 34280677 -106036088 - MLT2D LTR ERVL 0 414 1 185 259 103 35 chr10 34280789 34280847 -106035918 - L2 LINE L2 -87 3185 3124 2512 72 0 0 chr10 34280882 34281188 -106035577 - AluY SINE Alu -5 306 1 349 260 66 77 chr10 34281748 34281944 -106034821 + MLT1K LTR MaLR 395 588 0 2246 101 0 7 chr10 34282147 34282443 -106034322 - AluSx SINE Alu -18 294 1 1644 136 163 0 chr10 34282851 34283115 -106033650 - AluSx SINE Alu -5 307 1 281 245 68 30 chr10 34283343 34283453 -106033312 - MIR SINE MIR -62 146 46 5361 86 5 0 chr10 34284522 34285294 -106031471 - L1PA5 LINE L1 -4202 1944 1169 * 26284 40 8 0 chr10 34285292 34289475 -106027290 + L1PA5 LINE L1 1938 6146 -8 26 0 0 0 chr10 34289475 34289501 -106027264 + AT_rich Low_complexity Low_complexity 1 26 0 2420 248 58 60 chr10 34289995 34291075 -106025690 + L1MCb LINE L1 2 1079 -4966 1815 163 7 0 chr10 34291075 34291357 -106025408 + AluJb SINE Alu 1 284 -28 1320 187 37 0 chr10 34291376 34291694 -106025071 + L1MB8 LINE L1 5216 5543 -641 646 81 11 0 chr10 34291694 34291781 -106024984 - AluSc SINE Alu -221 88 1 1698 138 48 0 chr10 34291799 34292089 -106024676 + MER7A DNA MER2_type 1 302 -44 1205 171 74 24 chr10 34292100 34292436 -106024329 + L1MB8 LINE L1 5679 6028 -156 745 226 14 5 chr10 34292435 34292647 -106024118 + L1M4 LINE L1 4456 4669 -1477 * 310 293 155 56 chr10 34292851 34293083 -106023682 - L2 LINE L2 -190 3082 2828 258 365 88 19 chr10 34293081 34293240 -106023525 - L2 LINE L2 -640 2674 2505 * 338 318 143 16 chr10 34293301 34293397 -106023368 + L2 LINE L2 3014 3096 -217 1994 169 46 3 chr10 34293397 34293747 -106023018 + MLT1A1 LTR MaLR 1 365 0 338 318 143 16 chr10 34293747 34293908 -106022857 + L2 LINE L2 3096 3304 -9 2357 104 0 0 chr10 34294084 34294391 -106022374 + AluSg1 SINE Alu 1 307 -2 998 169 36 64 chr10 34294939 34295188 -106021577 + L1MB5 LINE L1 5925 6166 -8 637 329 55 88 chr10 34297024 34297565 -106019200 - L2 LINE L2 0 3272 2758 1468 153 0 118 chr10 34297565 34297713 -106019052 + AluJo SINE Alu 1 88 -224 2262 118 0 3 chr10 34297713 34298017 -106018748 + AluSx SINE Alu 1 303 -9 1468 153 0 118 chr10 34298017 34298208 -106018557 + AluJo SINE Alu 88 300 -12 637 329 55 88 chr10 34298208 34298227 -106018538 - L2 LINE L2 -514 2758 2740 25 31 0 0 chr10 34298530 34298562 -106018203 + AT_rich Low_complexity Low_complexity 1 32 0 224 254 15 0 chr10 34300321 34300388 -106016377 + (TA)n Simple_repeat Simple_repeat 1 68 0 1886 165 19 80 chr10 34300528 34300953 -106015812 + MER47B DNA MER2_type 20 418 0 326 336 9 0 chr10 34302969 34303082 -106013683 + MIR SINE MIR 83 196 -66 2216 99 0 13 chr10 34303284 34303588 -106013177 - AluSg SINE Alu -10 300 1 333 0 0 0 chr10 34304012 34304049 -106012716 + (TA)n Simple_repeat Simple_repeat 2 38 0 742 148 9 0 chr10 34304049 34304164 -106012601 - FLAM_C SINE Alu -17 116 1 2105 174 47 20 chr10 34304596 34304670 -106012095 - MER65C LTR ERV1 0 461 390 306 0 0 0 chr10 34304670 34304704 -106012061 + (TA)n Simple_repeat Simple_repeat 2 35 0 2105 174 47 20 chr10 34304704 34305078 -106011687 - MER65C LTR ERV1 -71 390 1 2083 135 0 3 chr10 34305098 34305387 -106011378 - AluSx SINE Alu -24 288 1 1751 170 0 24 chr10 34306008 34306328 -106010437 - AluJo SINE Alu 0 313 1 780 250 79 29 chr10 34306586 34306902 -106009863 - L1MC4a LINE L1 -1905 5903 5572 21 57 0 0 chr10 34306938 34306973 -106009792 + AT_rich Low_complexity Low_complexity 1 35 0 399 281 25 33 chr10 34307054 34307175 -106009590 - L2 LINE L2 -4 3309 3190 340 306 96 94 chr10 34308490 34309137 -106007628 + L1M2 LINE L1 458 1105 -5744 308 314 81 78 chr10 34309094 34309355 -106007410 - L1M2 LINE L1 -5596 1253 989 * 189 0 0 0 chr10 34309355 34309376 -106007389 + (CGG)n Simple_repeat Simple_repeat 3 23 0 308 314 81 78 chr10 34309376 34309461 -106007304 - L1M2 LINE L1 -5860 989 906 21 0 0 0 chr10 34309556 34309577 -106007188 + GC_rich Low_complexity Low_complexity 1 21 0 289 251 14 0 chr10 34309587 34309737 -106007028 + (TG)n Simple_repeat Simple_repeat 1 152 0 247 158 0 0 chr10 34311764 34311802 -106004963 - MER5A DNA MER1_type -1 188 151 716 193 77 42 chr10 34311858 34312117 -106004648 - MER33 DNA MER1_type -4 320 53 341 321 102 7 chr10 34312168 34312305 -106004460 + MER5A DNA MER1_type 1 150 -39 1247 171 41 4 chr10 34312306 34312575 -106004190 + L1MC3 LINE L1 7507 7785 0 668 264 72 10 chr10 34312718 34312911 -106003854 - MIR SINE MIR 0 262 58 303 298 53 21 chr10 34313080 34313174 -106003591 - MIR SINE MIR -146 116 20 21 0 0 0 chr10 34313262 34313283 -106003482 + AT_rich Low_complexity Low_complexity 1 21 0 535 194 54 0 chr10 34313303 34313432 -106003333 + L1ME1 LINE L1 5778 5913 -253 1322 191 110 3 chr10 34313585 34313921 -106002844 - L1ME LINE L1 -379 5787 5416 636 168 24 60 chr10 34313938 34313959 -106002806 - L1MA10 LINE L1 0 6334 6314 2277 226 82 34 chr10 34313959 34314757 -106002008 - L1ME1 LINE L1 -9 6157 5322 1629 205 3 16 chr10 34314759 34315066 -106001699 - AluJo SINE Alu -9 303 1 753 188 128 15 chr10 34315074 34315340 -106001425 - L1ME1 LINE L1 -2451 3695 3400 1189 113 0 18 chr10 34315341 34315509 -106001256 + FRAM SINE Alu 1 162 -14 293 270 51 0 chr10 34315509 34315646 -106001119 - L1ME1 LINE L1 -2744 3402 3259 4167 196 52 36 chr10 34315773 34317219 -105999546 + L1MC3 LINE L1 4744 6166 20 1981 139 13 7 chr10 34317219 34317529 -105999236 + AluSx SINE Alu 1 312 0 1894 152 7 16 chr10 34317535 34317844 -105998921 + AluSx SINE Alu 1 306 -6 4167 196 52 36 chr10 34317844 34318030 -105998735 + L1MC3 LINE L1 5221 5403 -743 1100 192 105 19 chr10 34318032 34318355 -105998410 - MLT1D LTR MaLR -154 351 1 1154 218 26 54 chr10 34318355 34318679 -105998086 + L1M4 LINE L1 4675 4988 -1158 1644 209 17 0 chr10 34318679 34318971 -105997794 + AluJo SINE Alu 1 297 -15 1154 218 26 54 chr10 34318971 34319036 -105997729 + L1M4 LINE L1 4988 5053 -1093 1382 201 25 22 chr10 34319056 34319370 -105997395 + MLT2D LTR ERVL 1 315 -99 1799 165 55 0 chr10 34319370 34319697 -105997068 - MER7A DNA MER2_type -3 343 1 232 253 13 0 chr10 34319759 34319834 -105996931 + L1M4 LINE L1 5086 5161 -985 4851 161 24 30 chr10 34319838 34320926 -105995839 + L1MD1 LINE L1 5089 6175 -67 1940 153 0 3 chr10 34320926 34321213 -105995552 - AluJb SINE Alu -26 286 1 4851 161 24 30 chr10 34321213 34321281 -105995484 + L1MD1 LINE L1 6175 6242 0 243 189 19 0 chr10 34321377 34321430 -105995335 + L1ME3 LINE L1 6067 6120 -42 21 0 0 0 chr10 34321459 34321480 -105995285 + AT_rich Low_complexity Low_complexity 1 21 0 769 169 0 0 chr10 34321545 34321669 -105995096 - FLAM_A SINE Alu -7 135 12 354 348 57 16 chr10 34321693 34321940 -105994825 - L2 LINE L2 -1396 1918 1662 641 248 139 12 chr10 34322187 34322631 -105994134 + MLT1F LTR MaLR 1 542 0 371 232 136 32 chr10 34322657 34322782 -105993983 - MIR SINE MIR -117 145 8 267 319 62 57 chr10 34322798 34323008 -105993757 - L2 LINE L2 -1883 1431 1221 1760 171 10 29 chr10 34323625 34323934 -105992831 + AluJb SINE Alu 1 303 -9 1813 168 25 68 chr10 34325714 34325897 -105990868 + MLT1C LTR MaLR 1 190 -277 1903 182 0 0 chr10 34325897 34326193 -105990572 + AluJb SINE Alu 5 300 -12 1813 168 25 68 chr10 34326193 34326497 -105990268 + MLT1C LTR MaLR 190 467 0 2101 110 14 0 chr10 34327290 34327603 -105989162 - AluSx SINE Alu 0 317 1 1588 186 21 0 chr10 34327609 34327889 -105988876 - AluJb SINE Alu -26 286 1 751 254 92 25 chr10 34327889 34328216 -105988549 + L1MC4 LINE L1 7295 7643 -399 364 262 14 90 chr10 34328216 34328361 -105988404 + L2 LINE L2 2308 2441 -873 691 189 0 0 chr10 34329195 34329322 -105987443 - L1 LINE L1 -886 5260 5134 294 241 0 23 chr10 34329946 34330033 -105986732 + GA-rich Low_complexity Low_complexity 2 86 0 887 197 23 14 chr10 34330455 34330673 -105986092 - L1 LINE L1 -1000 5146 4927 4772 164 21 16 chr10 34330686 34331384 -105985381 + L1MA8 LINE L1 5255 5961 -330 2403 84 3 0 chr10 34331384 34331683 -105985082 + AluSp SINE Alu 1 300 -13 4772 164 21 16 chr10 34331683 34331981 -105984784 + L1MA8 LINE L1 5961 6256 -35 2203 100 0 0 chr10 34332905 34333194 -105983571 - AluSg SINE Alu -21 289 1 2106 123 7 3 chr10 34333407 34333708 -105983057 + AluSc SINE Alu 1 302 -7 278 75 25 0 chr10 34334117 34334157 -105982608 + L1P LINE L1 5322 5362 -794 316 218 0 0 chr10 34334157 34334212 -105982553 + Tigger5 DNA MER2_type 1 55 -2268 1356 144 9 19 chr10 34334234 34334449 -105982316 - AluJo SINE Alu -13 299 87 462 226 0 0 chr10 34334452 34334536 -105982229 + Tigger5 DNA MER2_type 2240 2323 0 297 0 0 0 chr10 34334665 34334698 -105982067 + (CA)n Simple_repeat Simple_repeat 1 33 0 4303 147 21 31 chr10 34334698 34334758 -105982007 + L1MB3 LINE L1 5435 5494 -689 1645 193 3 14 chr10 34334758 34335054 -105981711 + AluJo SINE Alu 1 293 -19 4303 147 21 31 chr10 34335054 34335737 -105981028 + L1MB3 LINE L1 5494 6171 -12 2316 83 6 13 chr10 34335847 34336160 -105980605 + AluY SINE Alu 1 311 0 2156 81 39 0 chr10 34336173 34336456 -105980309 + AluSg SINE Alu 1 294 -16 2368 88 3 0 chr10 34336507 34336813 -105979952 + AluSg SINE Alu 1 307 -3 334 217 125 120 chr10 34336951 34337135 -105979630 + L1MC/D LINE L1 5418 5602 -757 1613 215 52 67 chr10 34337142 34337331 -105979434 + L1M4 LINE L1 2720 2910 -3236 1539 157 37 33 chr10 34337331 34337630 -105979135 + AluJb SINE Alu 1 300 -12 1613 215 52 67 chr10 34337630 34337820 -105978945 + L1M4 LINE L1 2910 3101 -3045 2393 94 0 0 chr10 34337820 34338127 -105978638 + AluSg SINE Alu 1 307 -3 1613 215 52 67 chr10 34338127 34338246 -105978519 + L1M4 LINE L1 3101 3211 -2935 1720 159 40 13 chr10 34338246 34338548 -105978217 + AluJb SINE Alu 3 312 0 1613 215 52 67 chr10 34338548 34338656 -105978109 + L1M4 LINE L1 3211 3319 -2827 406 269 20 67 chr10 34338874 34339023 -105977742 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34339169 34339240 -105977525 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34339276 34339401 -105977364 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34339540 34339675 -105977090 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34340214 34340787 -105975978 + L1ME4a LINE L1 5301 5901 -220 2328 93 0 7 chr10 34340884 34341186 -105975579 - AluSp SINE Alu -13 300 1 1643 98 5 0 chr10 34341576 34341790 -105974975 - AluSp SINE Alu -3 310 96 1589 139 6 104 chr10 34341791 34342136 -105974629 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34343206 34343500 -105973265 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34343829 34343954 -105972811 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34343954 34343996 -105972769 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34344005 34344058 -105972707 + L1MC4 LINE L1 7546 7598 -444 2338 100 0 13 chr10 34344064 34344374 -105972391 + AluSx SINE Alu 1 306 -6 748 148 0 0 chr10 34344389 34344504 -105972261 - MLT1A1 LTR MaLR -6 359 245 886 157 0 63 chr10 34344515 34344674 -105972091 + FRAM SINE Alu 10 158 -18 654 222 5 7 chr10 34344696 34344901 -105971864 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34344921 34344955 -105971810 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34344955 34345262 -105971503 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34345262 34345462 -105971303 + L1MC4 LINE L1 7642 7821 -221 2264 92 0 7 chr10 34345462 34345757 -105971008 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34345757 34345913 -105970852 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34346105 34346339 -105970426 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34346334 34347096 -105969669 + L1MEc LINE L1 837 1678 -4718 3931 145 87 5 chr10 34347123 34347780 -105968985 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34347780 34348133 -105968632 - MER50-int LTR ERV1 -8 7197 6840 * 6153 121 9 30 chr10 34348127 34349110 -105967655 - MER50-int LTR ERV1 -1000 6205 5243 1644 151 176 22 chr10 34349111 34349475 -105967290 + MSTA LTR MaLR 1 420 -8 9650 126 12 37 chr10 34349481 34351051 -105965714 + MSTA-int LTR MaLR 3 1533 -47 1339 152 18 13 chr10 34351051 34351275 -105965490 - AluSg/x SINE Alu -10 302 78 1813 177 138 26 chr10 34351317 34351702 -105965063 + MSTA LTR MaLR 1 428 0 3734 129 32 32 chr10 34351702 34352156 -105964609 - MER50-int LTR ERV1 -1071 5223 4782 2349 119 0 0 chr10 34352156 34352466 -105964299 - AluSq SINE Alu -3 310 1 3734 129 32 32 chr10 34352466 34352637 -105964128 - MER50-int LTR ERV1 -1512 4782 4612 2190 104 0 13 chr10 34352637 34352936 -105963829 - AluSg SINE Alu -15 295 1 670 97 97 0 chr10 34352936 34353039 -105963726 - AluSg/x SINE Alu -3 309 197 1379 110 0 6 chr10 34353081 34353263 -105963502 - AluSc SINE Alu -89 220 40 273 128 0 0 chr10 34353264 34353303 -105963462 - MER50-int LTR ERV1 -3184 4353 4315 2167 119 7 0 chr10 34353303 34353613 -105963152 - AluSx SINE Alu 0 312 1 473 256 6 44 chr10 34354994 34355154 -105961611 + L2 LINE L2 2205 2358 -956 562 265 133 27 chr10 34355186 34355480 -105961285 - MER46C DNA MER2_type -6 332 8 434 295 176 4 chr10 34355515 34355759 -105961006 + L1ME LINE L1 5254 5539 -2269 224 206 0 73 chr10 34355760 34355828 -105960937 + MIR SINE MIR 195 257 -5 442 259 38 71 chr10 34355835 34355895 -105960870 + L1ME LINE L1 5536 5596 -525 2370 92 0 0 chr10 34355895 34356189 -105960576 - AluSp SINE Alu -19 294 1 442 259 38 71 chr10 34356189 34356340 -105960425 + L1ME LINE L1 5596 5740 -381 485 206 19 0 chr10 34356469 34356576 -105960189 - MLT1L LTR MaLR -342 273 165 817 149 91 26 chr10 34356626 34356780 -105959985 + FRAM SINE Alu 1 155 -21 1169 195 129 33 chr10 34356786 34356876 -105959889 - Charlie1 DNA MER1_type -51 2710 2630 2239 121 0 3 chr10 34356876 34357183 -105959582 + AluSg SINE Alu 1 306 -4 1169 195 129 33 chr10 34357183 34357425 -105959340 - Charlie1 DNA MER1_type -131 2630 2346 2011 151 3 0 chr10 34357482 34357781 -105958984 - AluJb SINE Alu -12 300 1 590 288 63 54 chr10 34357978 34358043 -105958722 + L2 LINE L2 2647 2710 -603 3989 162 28 35 chr10 34358043 34358091 -105958674 - L1MB3 LINE L1 -3 6180 6133 2408 89 0 0 chr10 34358091 34358394 -105958371 - AluSx SINE Alu -3 309 7 3989 162 28 35 chr10 34358394 34359087 -105957678 - L1MB3 LINE L1 -50 6133 5444 590 288 63 54 chr10 34359087 34359434 -105957331 + L2 LINE L2 2710 3064 -249 606 226 0 16 chr10 34359452 34359576 -105957189 - L2 LINE L2 -7 3306 3185 452 95 0 54 chr10 34360234 34360308 -105956457 - FLAM_A SINE Alu -5 137 68 1889 52 0 4 chr10 34360308 34360539 -105956226 - LTR9 LTR ERV1 -382 230 1 2229 187 74 4 chr10 34360591 34361120 -105955645 - Charlie1 DNA MER1_type -64 2697 2132 356 230 14 14 chr10 34361102 34361176 -105955589 - Charlie1 DNA MER1_type -2681 80 7 * 250 276 68 98 chr10 34361179 34361342 -105955423 + L2 LINE L2 3155 3312 -1 2014 152 19 0 chr10 34361702 34362011 -105954754 + 7SLRNA srpRNA srpRNA 1 315 -5 233 242 185 70 chr10 34362237 34362325 -105954440 + MER5A DNA MER1_type 9 86 -103 2271 226 66 35 chr10 34362325 34362901 -105953864 + MLT1G1 LTR MaLR 2 595 0 233 242 185 70 chr10 34362901 34362969 -105953796 + MER5A DNA MER1_type 86 183 -6 1575 158 10 59 chr10 34362989 34363293 -105953472 - AluJo SINE Alu -23 289 1 1116 85 0 14 chr10 34364001 34364142 -105952623 + AluSq/x SINE Alu 1 139 -174 965 88 0 22 chr10 34364255 34364391 -105952374 + AluSg/x SINE Alu 170 302 -10 1812 156 11 11 chr10 34364425 34364707 -105952058 - AluSx SINE Alu -21 291 10 544 287 32 6 chr10 34364745 34364902 -105951863 + MER34 LTR ERV1 97 257 -285 1721 129 129 4 chr10 34364902 34365027 -105951738 + AluSx SINE Alu 2 110 -202 216 0 0 0 chr10 34365027 34365051 -105951714 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1721 129 129 4 chr10 34365051 34365197 -105951568 + AluSx SINE Alu 110 307 -5 921 134 0 107 chr10 34365197 34365384 -105951381 + AluJb SINE Alu 137 303 -9 608 225 66 11 chr10 34365473 34365534 -105951231 + MER31-int LTR ERV1 1561 1617 -3254 1673 162 17 30 chr10 34365534 34365831 -105950934 + AluJb SINE Alu 1 293 -19 608 225 66 11 chr10 34365831 34365951 -105950814 + MER31-int LTR ERV1 1617 1752 -3119 1078 164 61 23 chr10 34365954 34366168 -105950597 + AluJo SINE Alu 85 306 -6 963 180 28 92 chr10 34366178 34366650 -105950115 + MER31-int LTR ERV1 1117 2104 -2767 470 207 39 101 chr10 34366715 34366923 -105949842 + MER31-int LTR ERV1 3548 3742 -2856 578 179 20 139 chr10 34366977 34367110 -105949655 + MER31-int LTR ERV1 3731 3822 -2776 1881 130 49 36 chr10 34367110 34367149 -105949616 - AluSx SINE Alu 0 312 275 213 39 0 0 chr10 34367149 34367175 -105949590 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1881 130 49 36 chr10 34367175 34367443 -105949322 - AluSx SINE Alu -37 275 1 578 179 20 139 chr10 34367443 34367560 -105949205 + MER31-int LTR ERV1 3822 3951 -2647 2364 73 13 19 chr10 34367642 34367955 -105948810 - AluY SINE Alu 0 311 1 2290 99 17 0 chr10 34367957 34368249 -105948516 - AluSx SINE Alu -15 297 1 1782 179 3 3 chr10 34368251 34368547 -105948218 - AluJb SINE Alu -16 296 1 488 262 33 22 chr10 34368547 34368730 -105948035 + MER31-int LTR ERV1 2637 2821 -2115 421 209 96 17 chr10 34368733 34368848 -105947917 + MER65C LTR ERV1 338 461 0 431 248 22 44 chr10 34369172 34369309 -105947456 + L1ME4a LINE L1 4007 4140 -2006 387 197 102 22 chr10 34369627 34369764 -105947001 + LTR33 LTR ERVL 374 521 0 2106 120 3 3 chr10 34371385 34371685 -105945080 + AluSp SINE Alu 14 313 0 1844 164 13 0 chr10 34371707 34372005 -105944760 + AluSx SINE Alu 1 302 -10 862 139 0 36 chr10 34372332 34372469 -105944296 + FLAM_C SINE Alu 2 133 0 2208 93 0 14 chr10 34373045 34373335 -105943430 - AluSq SINE Alu -15 298 13 406 269 20 67 chr10 34373485 34373634 -105943131 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34373780 34373851 -105942914 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34373887 34374012 -105942753 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34374151 34374286 -105942479 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34374825 34375398 -105941367 + L1ME4a LINE L1 5301 5901 -220 2315 96 0 7 chr10 34375495 34375797 -105940968 - AluSp SINE Alu -13 300 1 1654 98 5 0 chr10 34376184 34376399 -105940366 - AluSp SINE Alu -3 310 95 1603 136 6 104 chr10 34376399 34376744 -105940021 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34377814 34378108 -105938657 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34378437 34378562 -105938203 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34378562 34378604 -105938161 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34378613 34378666 -105938099 + L1MC4 LINE L1 7546 7598 -444 2234 106 0 13 chr10 34378672 34378973 -105937792 + AluSx SINE Alu 1 297 -15 654 191 0 0 chr10 34378988 34379103 -105937662 - MLT1A1 LTR MaLR -6 359 245 876 163 0 62 chr10 34379113 34379273 -105937492 + FRAM SINE Alu 9 158 -18 654 222 5 7 chr10 34379295 34379500 -105937265 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34379520 34379554 -105937211 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34379554 34379861 -105936904 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34379861 34380061 -105936704 + L1MC4 LINE L1 7642 7821 -221 2249 95 0 7 chr10 34380061 34380356 -105936409 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34380356 34380512 -105936253 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34380704 34380938 -105935827 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34380933 34381695 -105935070 + L1MEc LINE L1 837 1678 -4718 3942 143 87 5 chr10 34381722 34382379 -105934386 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34382379 34382732 -105934033 - MER50-int LTR ERV1 -8 7197 6840 * 6168 120 9 30 chr10 34382726 34383709 -105933056 - MER50-int LTR ERV1 -1000 6205 5243 1670 148 176 22 chr10 34383710 34384074 -105932691 + MSTA LTR MaLR 1 420 -8 9628 126 12 33 chr10 34384078 34385650 -105931115 + MSTA-int LTR MaLR 1 1533 -47 1345 152 18 13 chr10 34385650 34385874 -105930891 - AluSg/x SINE Alu -10 300 76 1684 174 138 26 chr10 34385916 34386301 -105930464 + MSTA LTR MaLR 1 428 0 3658 132 32 32 chr10 34386301 34386755 -105930010 - MER50-int LTR ERV1 -1071 5223 4782 2360 119 0 0 chr10 34386755 34387065 -105929700 - AluSq SINE Alu -3 310 1 3658 132 32 32 chr10 34387065 34387236 -105929529 - MER50-int LTR ERV1 -1512 4782 4612 2210 104 0 13 chr10 34387236 34387535 -105929230 - AluSg SINE Alu -15 295 1 638 97 97 0 chr10 34387535 34387638 -105929127 - AluSg/x SINE Alu -3 306 194 1422 104 0 6 chr10 34387680 34387862 -105928903 - AluSc SINE Alu -89 220 40 1581 156 19 13 chr10 34387863 34387915 -105928850 - MER50-int LTR ERV1 -1642 3656 3606 2129 136 0 0 chr10 34387915 34388210 -105928555 - AluSx SINE Alu -12 300 6 1581 156 19 13 chr10 34388210 34388460 -105928305 - MER50-int LTR ERV1 -1692 3606 2921 1045 98 8 0 chr10 34388460 34388592 -105928173 - AluSq/x SINE Alu -180 133 1 3403 129 18 20 chr10 34388592 34389238 -105927527 - MER50-int LTR ERV1 -804 4076 3391 2858 138 62 4 chr10 34389238 34389689 -105927076 - MER50-int LTR ERV1 -3399 1481 1005 6390 142 41 11 chr10 34389787 34390534 -105926231 - MER50-int LTR ERV1 -5355 1850 1126 2291 93 0 0 chr10 34390534 34390842 -105925923 - AluSg SINE Alu 0 308 1 6390 142 41 11 chr10 34390842 34391771 -105924994 - MER50-int LTR ERV1 -6079 1126 1 4383 133 21 29 chr10 34391854 34391925 -105924840 - MER50 LTR ERV1 -23 711 641 2363 112 0 0 chr10 34391925 34392230 -105924535 - AluSx SINE Alu -7 305 1 4383 133 21 29 chr10 34392230 34392875 -105923890 - MER50 LTR ERV1 -93 641 1 8131 161 35 1 chr10 34392884 34394191 -105922574 + L1M1 LINE L1 967 2318 -5247 1870 135 4 0 chr10 34394191 34394458 -105922307 + AluSx SINE Alu 1 268 -44 856 215 99 0 chr10 34394676 34394899 -105921866 + MIR SINE MIR 18 262 0 1689 181 10 24 chr10 34395029 34395321 -105921444 + AluJo SINE Alu 1 288 -24 2509 55 3 0 chr10 34395362 34395652 -105921113 + AluY SINE Alu 3 293 -18 695 142 67 8 chr10 34395889 34396009 -105920756 + FLAM_A SINE Alu 1 127 -6 603 286 16 5 chr10 34396020 34396212 -105920553 - MIR SINE MIR -10 252 59 1902 158 17 0 chr10 34396534 34396826 -105919939 - AluJb SINE Alu -15 297 1 378 0 0 0 chr10 34396946 34396988 -105919777 + (TG)n Simple_repeat Simple_repeat 2 43 0 352 180 0 155 chr10 34396990 34397057 -105919708 + MER20 DNA MER1_type 7 83 -136 1900 152 0 17 chr10 34397057 34397353 -105919412 - AluJb SINE Alu -21 291 1 352 180 0 155 chr10 34397353 34397453 -105919312 + MER20 DNA MER1_type 83 219 0 285 222 189 22 chr10 34397625 34397715 -105919050 - L2 LINE L2 -10 3303 3199 1870 137 7 31 chr10 34397762 34398054 -105918711 + AluSx SINE Alu 1 285 -27 414 0 0 0 chr10 34398060 34398106 -105918659 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 231 104 83 0 chr10 34398114 34398162 -105918603 - LTR66 LTR ERVL -172 438 387 180 0 0 0 chr10 34398981 34399001 -105917764 + (CA)n Simple_repeat Simple_repeat 1 20 0 418 107 0 0 chr10 34399207 34399263 -105917502 + AluJ/FLAM SINE Alu 2 57 -255 2698 125 46 16 chr10 34399418 34399850 -105916915 - MER83 LTR ERV1 0 448 4 1700 157 7 11 chr10 34399850 34400130 -105916635 - AluJo SINE Alu -33 279 1 1161 146 0 0 chr10 34400220 34400384 -105916381 - AluSg/x SINE Alu -14 296 133 994 180 0 0 chr10 34400781 34400942 -105915823 - FRAM SINE Alu -12 164 4 709 137 21 132 chr10 34401066 34401118 -105915647 + L1MA5A LINE L1 6126 6182 -115 2106 107 7 3 chr10 34401118 34401408 -105915357 + AluSq SINE Alu 1 291 -22 1633 151 75 0 chr10 34401412 34401525 -105915240 + AluJo SINE Alu 1 104 -208 378 42 0 0 chr10 34401525 34401573 -105915192 + (CA)n Simple_repeat Simple_repeat 1 48 0 1633 151 75 0 chr10 34401573 34401737 -105915028 + AluJo SINE Alu 104 299 -13 709 137 21 132 chr10 34401737 34401869 -105914896 + L1MA5A LINE L1 6185 6294 -3 2438 222 140 25 chr10 34402136 34403037 -105913728 + L1MEc LINE L1 36 1102 -5294 1706 179 0 3 chr10 34403037 34403327 -105913438 + AluJo SINE Alu 23 311 -1 2438 222 140 25 chr10 34403327 34403504 -105913261 + L1MEc LINE L1 1102 1257 -5139 2098 141 7 0 chr10 34403720 34404026 -105912739 + AluSx SINE Alu 1 308 -4 288 361 115 0 chr10 34404187 34404536 -105912229 - L2 LINE L2 -962 2352 1964 1760 174 4 4 chr10 34405371 34405652 -105911113 + AluJb SINE Alu 1 281 -31 5269 78 32 7 chr10 34405669 34406386 -105910379 - SVA Other Other -2 1384 650 424 136 0 0 chr10 34406393 34406459 -105910306 + Alu SINE Alu 235 300 -12 227 204 93 0 chr10 34406744 34406798 -105909967 - MLT1K LTR MaLR 0 588 530 1319 184 0 84 chr10 34406800 34407099 -105909666 + AluJb SINE Alu 1 274 -38 731 69 15 31 chr10 34407100 34407230 -105909535 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 1223 221 75 96 chr10 34407268 34407343 -105909422 + MLT1F LTR MaLR 1 76 -466 3505 100 31 4 chr10 34407343 34407865 -105908900 - L1PA14 LINE L1 -2 6159 5624 1223 221 75 96 chr10 34407865 34408281 -105908484 + MLT1F LTR MaLR 76 482 -60 1910 144 0 7 chr10 34408291 34408575 -105908190 - AluJo SINE Alu -30 282 1 2528 68 0 0 chr10 34408767 34409063 -105907702 + AluY SINE Alu 2 297 -14 2671 43 0 0 chr10 34409618 34409919 -105906846 + AluY SINE Alu 1 301 -10 1755 153 14 14 chr10 34410964 34411280 -105905485 + AluJb SINE Alu 1 316 0 2318 100 0 0 chr10 34411576 34411867 -105904898 - AluY SINE Alu -20 291 1 725 146 9 0 chr10 34412063 34412173 -105904592 + FLAM_C SINE Alu 23 133 -10 551 238 0 8 chr10 34412405 34412527 -105904238 - L2 LINE L2 0 3313 3193 470 246 129 69 chr10 34412590 34412685 -105904080 + L1ME LINE L1 5420 5508 -613 1886 153 7 13 chr10 34412685 34412992 -105903773 - AluJb SINE Alu -5 307 3 470 246 129 69 chr10 34412992 34413128 -105903637 + L1ME LINE L1 5508 5665 -456 191 276 11 69 chr10 34413173 34413260 -105903505 + MIR SINE MIR 21 102 -160 559 279 24 18 chr10 34413272 34413437 -105903328 + MIR SINE MIR 81 246 -16 1542 163 37 41 chr10 34413644 34413938 -105902827 + AluJb SINE Alu 3 295 -17 6616 71 28 10 chr10 34413976 34415660 -105901105 + L1PA10 LINE L1 4429 6168 0 2390 103 0 0 chr10 34415666 34415976 -105900789 + AluSx SINE Alu 1 310 -2 341 282 32 8 chr10 34416401 34416525 -105900240 + LTR67 LTR ERVL 429 555 -2 2264 112 0 7 chr10 34416791 34417096 -105899669 - AluSx SINE Alu -9 303 1 1582 158 10 59 chr10 34417804 34418108 -105898657 + AluJo SINE Alu 1 289 -23 191 252 147 77 chr10 34418128 34418196 -105898569 - MER5A DNA MER1_type -6 183 121 2103 224 66 35 chr10 34418196 34418772 -105897993 - MLT1G1 LTR MaLR 0 595 2 191 252 147 77 chr10 34418772 34418846 -105897919 - MER5A DNA MER1_type -68 121 31 2034 154 19 0 chr10 34419086 34419398 -105897367 - 7SLRNA srpRNA srpRNA -2 318 1 209 282 68 98 chr10 34419757 34419920 -105896845 - L2 LINE L2 -1 3312 3155 354 230 14 14 chr10 34419923 34419997 -105896768 + Charlie1 DNA MER1_type 7 80 -2681 * 2156 189 74 4 chr10 34419979 34420508 -105896257 + Charlie1 DNA MER1_type 2132 2697 -64 1883 56 0 4 chr10 34420560 34420791 -105895974 + LTR9 LTR ERV1 1 230 -382 437 92 0 53 chr10 34420791 34420867 -105895898 + FLAM_C SINE Alu 69 140 -3 566 226 0 16 chr10 34421526 34421650 -105895115 + L2 LINE L2 3185 3306 -7 508 290 60 56 chr10 34421704 34422015 -105894750 - L2 LINE L2 -286 3027 2710 3808 160 28 35 chr10 34422015 34422708 -105894057 + L1MB3 LINE L1 5444 6133 -50 2428 89 0 0 chr10 34422708 34423011 -105893754 + AluSx SINE Alu 7 309 -3 3808 160 28 35 chr10 34423011 34423059 -105893706 + L1MB3 LINE L1 6133 6180 -3 508 290 60 56 chr10 34423059 34423124 -105893641 - L2 LINE L2 -603 2710 2647 2028 151 3 0 chr10 34423321 34423620 -105893145 + AluJb SINE Alu 1 300 -12 1154 188 131 33 chr10 34423681 34423919 -105892846 + Charlie1 DNA MER1_type 2350 2630 -131 2261 121 0 3 chr10 34423919 34424226 -105892539 - AluSg SINE Alu -4 306 1 1154 188 131 33 chr10 34424226 34424316 -105892449 + Charlie1 DNA MER1_type 2630 2710 -51 756 149 91 26 chr10 34424322 34424476 -105892289 - FRAM SINE Alu -21 155 1 487 206 19 0 chr10 34424526 34424633 -105892132 + MLT1L LTR MaLR 165 273 -342 426 259 38 71 chr10 34424762 34424913 -105891852 - L1ME LINE L1 -381 5740 5596 2399 92 0 0 chr10 34424913 34425208 -105891557 + AluSp SINE Alu 1 295 -18 426 259 38 71 chr10 34425208 34425268 -105891497 - L1ME LINE L1 -525 5596 5536 205 206 0 73 chr10 34425275 34425343 -105891422 - MIR SINE MIR -5 257 195 414 268 100 28 chr10 34425344 34425609 -105891156 - L1ME LINE L1 -770 5376 5236 523 269 133 27 chr10 34425623 34425917 -105890848 + MER46C DNA MER2_type 8 332 -6 432 256 6 44 chr10 34425949 34426109 -105890656 - L2 LINE L2 -956 2358 2205 338 76 0 136 chr10 34427456 34427490 -105889275 + L1MB2 LINE L1 6093 6115 -56 2144 103 21 0 chr10 34427490 34427780 -105888985 + AluSx SINE Alu 1 296 -16 338 76 0 136 chr10 34427780 34427811 -105888954 + L1MB2 LINE L1 6115 6149 -22 934 191 0 0 chr10 34427811 34427958 -105888807 - AluJb SINE Alu -29 283 137 467 117 13 52 chr10 34427959 34428036 -105888729 + MER2 DNA MER2_type 272 345 0 1100 236 220 24 chr10 34428078 34428628 -105888137 - HAL1 LINE L1 -36 2471 1814 310 213 120 13 chr10 34428644 34428719 -105888046 - HAL1 LINE L1 -766 1741 1659 1781 124 4 4 chr10 34428722 34428971 -105887794 + AluSx SINE Alu 1 249 -63 475 243 167 36 chr10 34429070 34429292 -105887473 - HAL1 LINE L1 -925 1582 1332 1473 230 203 17 chr10 34429301 34429888 -105886877 - HAL1 LINE L1 -1232 1275 580 1636 101 0 9 chr10 34429908 34430126 -105886639 + AluSx SINE Alu 1 216 -96 650 136 136 71 chr10 34430127 34430267 -105886498 + AluSc SINE Alu 150 298 -11 596 251 291 22 chr10 34430267 34430638 -105886127 - HAL1 LINE L1 -839 1668 1198 1345 149 5 0 chr10 34430681 34430896 -105885869 + AluSq SINE Alu 85 300 -13 250 264 153 18 chr10 34431461 34431624 -105885141 - LTR41 LTR ERVL -542 231 47 962 173 162 108 chr10 34431624 34431902 -105884863 - MLT1C LTR MaLR 0 467 98 669 286 89 31 chr10 34431910 34432330 -105884435 + HERV16 LTR ERVL 1787 1995 -3001 377 172 0 0 chr10 34432802 34432860 -105883905 + AluJ/FRAM SINE Alu 233 290 -12 1518 174 39 7 chr10 34432863 34433144 -105883621 + AluJb SINE Alu 1 290 -22 2262 90 10 3 chr10 34433158 34433459 -105883306 + AluSp SINE Alu 1 303 -10 1810 158 6 64 chr10 34433467 34433795 -105882970 + AluSx SINE Alu 1 309 -3 785 206 121 106 chr10 34434089 34434600 -105882165 + L1MC5 LINE L1 6961 7479 -482 614 195 65 95 chr10 34434669 34434779 -105881986 + L1MC5 LINE L1 7625 7737 -224 2422 57 3 35 chr10 34434779 34435093 -105881672 + AluY SINE Alu 7 310 -1 614 195 65 95 chr10 34435093 34435300 -105881465 + L1MC5 LINE L1 7737 7936 -25 2284 124 0 0 chr10 34435499 34435806 -105880959 + AluSx SINE Alu 1 307 -5 41 21 0 0 chr10 34436928 34436976 -105879789 + AT_rich Low_complexity Low_complexity 1 48 0 1840 98 0 12 chr10 34439184 34439440 -105877325 + AluSq SINE Alu 2 254 -59 2318 84 7 0 chr10 34439892 34440191 -105876574 - AluSp SINE Alu -12 301 1 441 312 133 21 chr10 34440447 34440777 -105875988 + L1MC4 LINE L1 7536 7902 -140 1135 113 12 0 chr10 34441223 34441383 -105875382 + AluSp SINE Alu 122 283 -30 204 40 0 0 chr10 34441537 34441562 -105875203 + (GA)n Simple_repeat Simple_repeat 2 26 0 419 191 86 0 chr10 34441693 34441798 -105874967 + L1ME LINE L1 5551 5664 -457 2285 98 10 7 chr10 34441832 34442139 -105874626 + AluSq SINE Alu 1 308 -5 1708 184 3 7 chr10 34442851 34443166 -105873599 + AluJb SINE Alu 1 314 0 2321 94 10 0 chr10 34443168 34443477 -105873288 + AluSp SINE Alu 1 312 -1 1860 102 24 54 chr10 34443510 34443827 -105872938 - AluSx SINE Alu 0 308 1 24 0 0 0 chr10 34445713 34445737 -105871028 + AT_rich Low_complexity Low_complexity 1 24 0 1201 180 27 9 chr10 34445759 34445981 -105870784 - AluJb SINE Alu -78 234 9 22 0 0 0 chr10 34446107 34446129 -105870636 + AT_rich Low_complexity Low_complexity 1 22 0 1521 163 39 25 chr10 34447437 34447719 -105869046 - AluJo SINE Alu -26 286 1 1899 145 0 3 chr10 34448689 34448986 -105867779 + AluY SINE Alu 4 299 -12 22 35 0 0 chr10 34450099 34450128 -105866637 + AT_rich Low_complexity Low_complexity 1 29 0 1674 225 77 31 chr10 34450523 34451136 -105865629 + L1MC3 LINE L1 4629 5274 -872 2820 10 0 0 chr10 34451136 34451441 -105865324 - AluYa5 SINE Alu -6 305 1 1674 225 77 31 chr10 34451441 34451466 -105865299 + L1MC3 LINE L1 5274 5296 -850 2213 109 0 3 chr10 34451469 34451771 -105864994 + AluSx SINE Alu 1 301 -11 2184 130 0 13 chr10 34451782 34452097 -105864668 + AluSx SINE Alu 1 311 -1 2550 178 77 48 chr10 34452100 34452372 -105864393 + L1MC3 LINE L1 5417 5680 -2105 1981 158 0 0 chr10 34452372 34452663 -105864102 - AluSx SINE Alu -21 291 1 2550 178 77 48 chr10 34452663 34453081 -105863684 + L1MC3 LINE L1 5680 6127 -1658 2371 90 0 13 chr10 34453140 34453452 -105863313 + AluY SINE Alu 1 308 -3 181 195 98 0 chr10 34453605 34453646 -105863119 + MIR SINE MIR 33 77 -131 225 156 94 0 chr10 34454454 34454518 -105862247 + L1MC5 LINE L1 7868 7937 -24 1580 167 73 31 chr10 34454606 34454894 -105861871 - AluJb SINE Alu -12 300 1 1326 147 44 0 chr10 34454967 34455171 -105861594 - AluJb SINE Alu -15 297 85 192 202 128 32 chr10 34455249 34455343 -105861422 + MIR SINE MIR 110 212 -50 765 169 52 0 chr10 34456220 34456356 -105860409 + MER46A DNA MER2_type 34 176 -60 2381 74 7 0 chr10 34457226 34457524 -105859241 + AluSq SINE Alu 2 301 -12 221 257 14 95 chr10 34457529 34457603 -105859162 - L2 LINE L2 -19 3294 3227 22 0 0 0 chr10 34457796 34457818 -105858947 + AT_rich Low_complexity Low_complexity 1 22 0 282 341 109 31 chr10 34458393 34458622 -105858143 - L2 LINE L2 0 3272 3026 2339 73 7 7 chr10 34458708 34459008 -105857757 + AluSq SINE Alu 1 300 -13 2355 87 0 0 chr10 34459072 34459371 -105857394 + AluSq SINE Alu 1 299 -14 372 236 101 0 chr10 34459472 34459606 -105857159 + MER20 DNA MER1_type 46 202 -17 1779 155 56 9 chr10 34460627 34460949 -105855816 + MER1B DNA MER1_type 1 337 0 488 173 119 38 chr10 34461451 34461467 -105855298 - L1M3f LINE L1 -4097 1527 1514 2155 120 0 3 chr10 34461467 34461767 -105854998 - AluSx SINE Alu -13 299 1 488 173 119 38 chr10 34461767 34461989 -105854776 - L1M3f LINE L1 -4110 1514 1018 195 42 0 0 chr10 34463138 34463162 -105853603 + (TC)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr10 34463740 34463769 -105852996 + AT_rich Low_complexity Low_complexity 1 29 0 1124 126 0 0 chr10 34463782 34463941 -105852824 - AluSg/x SINE Alu -19 291 133 1397 115 5 0 chr10 34464992 34465183 -105851582 + AluSg/x SINE Alu 86 277 -33 2414 67 0 0 chr10 34465196 34465479 -105851286 + AluSg SINE Alu 13 295 -15 365 258 44 88 chr10 34465762 34465921 -105850844 - MIR3 SINE MIR -34 174 23 198 220 286 0 chr10 34466237 34466328 -105850437 - L2 LINE L2 -22 3291 3175 360 0 0 0 chr10 34467981 34468021 -105848744 + (CA)n Simple_repeat Simple_repeat 2 41 0 2206 96 17 3 chr10 34468076 34468369 -105848396 + AluSg SINE Alu 1 297 -13 1021 138 0 0 chr10 34468382 34468527 -105848238 + AluSg/x SINE Alu 156 300 -12 1301 167 38 52 chr10 34469006 34469293 -105847472 - AluJo SINE Alu -29 283 1 218 231 58 0 chr10 34469933 34469985 -105846780 + L2 LINE L2 3210 3264 -8 943 208 47 63 chr10 34470261 34470357 -105846408 - MIR SINE MIR -7 255 159 2213 84 3 52 chr10 34470357 34470666 -105846099 - AluSx SINE Alu -18 294 1 943 208 47 63 chr10 34470666 34470824 -105845941 - MIR SINE MIR -103 159 5 2242 88 0 23 chr10 34471751 34472058 -105844707 + AluSp SINE Alu 2 301 -12 577 231 15 15 chr10 34472119 34472249 -105844516 - MIR SINE MIR -118 144 15 414 347 164 45 chr10 34473033 34473699 -105843066 + L3 LINE CR1 325 1069 -508 601 259 33 61 chr10 34473723 34473935 -105842830 + L2 LINE L2 556 761 -2553 853 127 14 42 chr10 34473936 34474078 -105842687 - FLAM_C SINE Alu -5 138 1 1179 259 267 16 chr10 34474092 34474175 -105842590 + L2 LINE L2 772 833 -2481 2132 146 14 27 chr10 34474175 34474545 -105842220 - MER47A DNA MER2_type -1 365 1 1179 259 267 16 chr10 34474545 34475105 -105841660 + L2 LINE L2 833 1577 -1737 308 343 35 21 chr10 34475103 34475246 -105841519 + L3 LINE CR1 1327 1471 -106 * 234 258 106 0 chr10 34476078 34476144 -105840621 + L2 LINE L2 3187 3259 -54 1473 144 156 4 chr10 34476233 34476489 -105840276 - AluJb SINE Alu -7 295 1 182 310 224 0 chr10 34476507 34476623 -105840142 - L2 LINE L2 0 3313 3172 323 237 175 0 chr10 34476945 34477059 -105839706 - Charlie1a DNA MER1_type -1320 135 2 290 235 126 34 chr10 34477064 34477183 -105839582 - L2 LINE L2 -1235 2079 1950 316 219 288 19 chr10 34477822 34478027 -105838738 + MLT1L LTR MaLR 354 613 -2 1378 117 0 0 chr10 34478538 34478718 -105838047 - AluSx SINE Alu -132 180 1 2288 83 3 29 chr10 34480801 34481115 -105835650 + AluSq SINE Alu 1 306 -7 198 71 0 0 chr10 34482879 34482907 -105833858 + (CA)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 34483559 34483580 -105833185 + (CGG)n Simple_repeat Simple_repeat 2 22 0 472 141 87 0 chr10 34484104 34484196 -105832569 + HY3 scRNA scRNA 1 100 -1 188 290 43 65 chr10 34484796 34484867 -105831898 + MIR3 SINE MIR 103 173 -35 2734 198 54 14 chr10 34484867 34485359 -105831406 - LTR65 LTR ERV1 0 669 143 1887 141 36 20 chr10 34485359 34485664 -105831101 + AluJo SINE Alu 1 310 -2 2734 198 54 14 chr10 34485664 34485814 -105830951 - LTR65 LTR ERV1 -526 143 1 188 290 43 65 chr10 34485814 34485835 -105830930 + MIR3 SINE MIR 173 193 -15 2701 188 28 17 chr10 34486113 34486650 -105830115 - MER67A LTR ERV1 0 543 1 711 308 84 15 chr10 34486668 34486941 -105829824 - MER102b DNA MER1_type -49 292 1 1936 165 0 3 chr10 34487597 34487906 -105828859 + AluSx SINE Alu 1 308 -4 2431 93 0 0 chr10 34488325 34488627 -105828138 + AluSq SINE Alu 1 302 -11 2181 220 43 17 chr10 34488688 34489156 -105827609 + MLT1H1 LTR MaLR 66 545 -10 21 0 0 0 chr10 34489251 34489272 -105827493 + AT_rich Low_complexity Low_complexity 1 21 0 257 309 21 11 chr10 34489570 34489664 -105827101 - L2 LINE L2 -7 3306 3212 216 0 0 0 chr10 34490084 34490108 -105826657 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2238 110 3 0 chr10 34490112 34490404 -105826361 - AluSx SINE Alu -19 293 1 764 188 0 16 chr10 34490407 34490535 -105826230 - FLAM_A SINE Alu -7 126 1 1282 216 120 22 chr10 34490571 34491079 -105825686 - HAL1 LINE L1 -6 2501 1944 280 137 324 10 chr10 34491071 34491173 -105825592 - HAL1 LINE L1 -950 1557 1424 * 286 182 11 23 chr10 34491181 34491269 -105825496 - HAL1 LINE L1 -1320 1187 1101 315 0 0 0 chr10 34491273 34491308 -105825457 + (TG)n Simple_repeat Simple_repeat 2 36 0 1785 183 0 10 chr10 34491335 34491635 -105825130 + AluJb SINE Alu 1 297 -15 360 0 0 0 chr10 34491668 34491708 -105825057 + (TG)n Simple_repeat Simple_repeat 2 41 0 2168 112 3 0 chr10 34491808 34492095 -105824670 - AluSp SINE Alu -24 289 2 379 323 39 35 chr10 34492095 34492327 -105824438 - HAL1 LINE L1 -1569 938 706 2209 132 0 3 chr10 34492327 34492638 -105824127 - AluSx SINE Alu -2 310 1 3706 135 20 26 chr10 34492639 34493282 -105823483 - L1 LINE L1 -954 5192 4554 1060 330 66 17 chr10 34493301 34493870 -105822895 - HAL1 LINE L1 -1817 690 84 1840 152 3 37 chr10 34493870 34494192 -105822573 - AluSx SINE Alu -1 311 1 1060 330 66 17 chr10 34494192 34494271 -105822494 - HAL1 LINE L1 -2423 84 10 182 292 133 26 chr10 34494299 34494412 -105822353 + L2 LINE L2 3170 3294 -19 1938 174 0 0 chr10 34494743 34495048 -105821717 - AluJo SINE Alu -6 306 2 1065 117 0 0 chr10 34495275 34495420 -105821345 - AluSx SINE Alu 0 310 166 541 138 0 0 chr10 34495420 34495500 -105821265 - AluSx SINE Alu -232 81 2 1817 109 68 4 chr10 34495645 34495955 -105820810 - AluSg SINE Alu 0 327 1 357 219 134 17 chr10 34496077 34496196 -105820569 - LTR16A LTR ERVL -110 340 208 2281 99 16 0 chr10 34496407 34496710 -105820055 - AluSq SINE Alu -5 308 1 2479 76 3 0 chr10 34496936 34497239 -105819526 - AluSp SINE Alu -9 304 1 1776 168 7 20 chr10 34497240 34497408 -105819357 - AluJo SINE Alu -19 293 129 2396 87 3 0 chr10 34497408 34497706 -105819059 - AluSx SINE Alu -13 299 1 1776 168 7 20 chr10 34497706 34497834 -105818931 - AluJo SINE Alu -183 129 1 202 149 54 14 chr10 34500885 34500959 -105815806 + (TA)n Simple_repeat Simple_repeat 1 77 0 303 287 108 31 chr10 34501355 34501484 -105815281 - L2 LINE L2 -1 3312 3174 2229 94 0 17 chr10 34502565 34502864 -105813901 + AluSg SINE Alu 1 294 -16 234 200 0 0 chr10 34502868 34502913 -105813852 + MIR SINE MIR 218 262 0 661 186 39 16 chr10 34503021 34503150 -105813615 + FLAM_C SINE Alu 2 133 -10 1582 122 26 86 chr10 34503435 34503762 -105813003 - AluJo SINE Alu 0 309 1 2320 214 78 24 chr10 34503791 34504255 -105812510 + MER21B LTR ERV1 151 650 -213 1748 94 124 15 chr10 34504255 34504520 -105812245 + AluSg1 SINE Alu 5 298 -11 2320 214 78 24 chr10 34504520 34504596 -105812169 + MER21B LTR ERV1 650 720 -143 2201 117 0 0 chr10 34504603 34504893 -105811872 + AluSx SINE Alu 11 300 -12 428 165 0 0 chr10 34504911 34504990 -105811775 - Alu SINE Alu 0 312 234 856 118 0 8 chr10 34504992 34505111 -105811654 + FLAM_C SINE Alu 14 131 -12 2340 120 0 0 chr10 34505748 34506057 -105810708 + AluSc SINE Alu 1 309 0 1919 168 0 7 chr10 34506261 34506570 -105810195 + AluJo SINE Alu 1 307 -5 4638 183 57 37 chr10 34507042 34507094 -105809671 - Tigger6a DNA MER2_type -514 1083 1034 1982 125 14 0 chr10 34507094 34507398 -105809367 + AluSx SINE Alu 1 308 0 4638 183 57 37 chr10 34507398 34507698 -105809067 - Tigger6a DNA MER2_type -563 1034 741 2170 114 31 0 chr10 34507698 34507987 -105808778 - AluSx SINE Alu -14 298 1 4638 183 57 37 chr10 34507987 34508217 -105808548 - Tigger6a DNA MER2_type -856 741 517 2010 154 0 3 chr10 34508217 34508516 -105808249 - AluSx SINE Alu -13 299 2 4638 183 57 37 chr10 34508516 34508992 -105807773 - Tigger6a DNA MER2_type -1080 517 1 2072 121 3 3 chr10 34509656 34509953 -105806812 + AluSq SINE Alu 1 297 -16 288 149 21 0 chr10 34510091 34510138 -105806627 - MER66B LTR ERV1 -141 345 298 1481 156 0 9 chr10 34510873 34511104 -105805661 + AluJb SINE Alu 1 229 -83 2088 129 7 7 chr10 34511104 34511413 -105805352 - AluSx SINE Alu -3 309 1 496 163 0 0 chr10 34511413 34511499 -105805266 + AluJb SINE Alu 221 306 -6 911 294 96 14 chr10 34511620 34512049 -105804716 + LTR16B LTR ERVL 1 464 0 2435 103 0 0 chr10 34512236 34512538 -105804227 + AluSq SINE Alu 1 302 -11 1654 172 14 4 chr10 34512666 34512945 -105803820 - AluJo SINE Alu -26 286 5 296 318 18 18 chr10 34513002 34513112 -105803653 + MER5A DNA MER1_type 80 189 0 2148 122 7 10 chr10 34513357 34513661 -105803104 + AluSx SINE Alu 1 303 -9 586 147 0 8 chr10 34513901 34514113 -105802652 + AluJo SINE Alu 3 274 -38 13144 194 24 26 chr10 34514497 34515047 -105801718 - L1PA16 LINE L1 -3 6163 5614 2403 90 0 0 chr10 34515047 34515348 -105801417 - AluY SINE Alu -10 301 1 13144 194 24 26 chr10 34515348 34515486 -105801279 - L1PA16 LINE L1 -552 5614 5477 2366 98 0 0 chr10 34515486 34515783 -105800982 + AluSq SINE Alu 1 297 -16 13144 194 24 26 chr10 34515783 34519084 -105797681 - L1PA16 LINE L1 -689 5477 2187 2516 66 0 3 chr10 34519084 34519385 -105797380 - AluSp SINE Alu -13 300 1 13144 194 24 26 chr10 34519385 34519443 -105797322 - L1PA16 LINE L1 -3979 2187 2130 2248 110 0 0 chr10 34519485 34519775 -105796990 - AluSg SINE Alu -20 290 1 2280 83 3 29 chr10 34519777 34520090 -105796675 - AluY SINE Alu -6 305 1 2311 110 0 3 chr10 34520235 34520545 -105796220 - AluSg SINE Alu -1 309 1 213 182 136 30 chr10 34521189 34521255 -105795510 - L2 LINE L2 -2 3311 3239 402 329 167 13 chr10 34521353 34521873 -105794892 - L2 LINE L2 -211 3061 2454 773 144 29 69 chr10 34521906 34522025 -105794740 - MER96B DNA MER1_type? -10 407 296 2066 115 56 0 chr10 34522025 34522313 -105794452 + AluSg SINE Alu 1 304 -6 773 144 29 69 chr10 34522313 34522366 -105794399 - MER96B DNA MER1_type? -121 296 242 327 261 52 30 chr10 34522390 34522524 -105794241 - MIR SINE MIR -66 196 60 925 229 0 0 chr10 34522788 34522954 -105793811 + FRAM SINE Alu 1 166 0 1995 142 78 26 chr10 34523213 34523559 -105793206 + THE1B LTR MaLR 1 364 0 1747 144 0 0 chr10 34523692 34523935 -105792830 - AluSx SINE Alu -15 297 55 2141 124 40 32 chr10 34524815 34525187 -105791578 - THE1C LTR MaLR 0 375 1 11159 100 8 34 chr10 34525187 34526809 -105789956 - THE1C-int LTR MaLR 0 1580 1 2251 116 19 26 chr10 34526809 34527187 -105789578 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 34527568 34527589 -105789176 + AT_rich Low_complexity Low_complexity 1 21 0 760 200 0 67 chr10 34527882 34527919 -105788846 + FRAM SINE Alu 1 39 -273 2726 78 19 0 chr10 34527919 34528280 -105788485 - L1PA8 LINE L1 0 6172 5805 760 200 0 67 chr10 34528280 34528422 -105788343 + FRAM SINE Alu 39 168 -8 390 308 38 11 chr10 34529060 34529245 -105787520 - L1MC4 LINE L1 -1073 6969 6780 2177 148 35 83 chr10 34530672 34530841 -105785924 - MSTB2 LTR MaLR 0 457 281 2104 135 3 10 chr10 34530841 34531152 -105785613 + AluSx SINE Alu 1 309 -3 2177 148 35 83 chr10 34531152 34531462 -105785303 - MSTB2 LTR MaLR -176 281 1 205 200 0 0 chr10 34532570 34532610 -105784155 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2066 123 24 0 chr10 34532973 34533265 -105783500 + AluSq SINE Alu 1 299 -14 337 291 61 20 chr10 34533386 34533534 -105783231 - MIR SINE MIR -50 212 59 1487 141 77 0 chr10 34533614 34533862 -105782903 + AluJb SINE Alu 1 267 -45 656 264 40 17 chr10 34533879 34534053 -105782712 + MER45A DNA AcHobo 1 178 0 337 80 0 20 chr10 34534286 34534336 -105782429 - MADE1 DNA Mariner -31 49 1 1751 174 10 13 chr10 34534453 34534751 -105782014 - AluJo SINE Alu -15 297 1 266 274 91 69 chr10 34534978 34535153 -105781612 + MER68 LTR ERV1 353 531 -31 2313 81 0 0 chr10 34535329 34535613 -105781152 + AluY SINE Alu 5 288 -23 560 288 72 46 chr10 34535872 34536207 -105780558 + L1MC4a LINE L1 5489 5740 -422 2241 106 0 10 chr10 34536207 34536509 -105780256 + AluSx SINE Alu 1 299 -13 560 288 72 46 chr10 34536509 34536531 -105780234 + L1MC4a LINE L1 5740 5760 -402 350 257 28 0 chr10 34538394 34538503 -105778262 - L1MA5 LINE L1 -443 5857 5746 * 364 283 9 0 chr10 34538501 34538614 -105778151 - L1MA5 LINE L1 -441 5859 5746 538 154 77 26 chr10 34538616 34538733 -105778032 - L1MA5A LINE L1 -440 5857 5735 1934 129 3 3 chr10 34539905 34540200 -105776565 + AluJb SINE Alu 1 295 -17 33 90 0 0 chr10 34540233 34540322 -105776443 + AT_rich Low_complexity Low_complexity 1 89 0 867 157 59 7 chr10 34540741 34540894 -105775871 - FAM SINE Alu -14 171 11 801 175 165 48 chr10 34540970 34541279 -105775486 + L1MC5 LINE L1 7582 7926 -35 2192 100 0 23 chr10 34541508 34541817 -105774948 - AluSg SINE Alu -8 302 1 180 111 0 0 chr10 34542152 34542179 -105774586 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr10 34542249 34542288 -105774477 + AT_rich Low_complexity Low_complexity 1 39 0 1193 57 0 6 chr10 34542602 34542761 -105774004 + (TTC)n Simple_repeat Simple_repeat 2 159 0 1445 28 0 6 chr10 34542810 34542989 -105773776 + (TTC)n Simple_repeat Simple_repeat 3 180 0 627 159 0 0 chr10 34542990 34543103 -105773662 + CT-rich Low_complexity Low_complexity 3 115 0 710 231 25 6 chr10 34543108 34543268 -105773497 - FRAM SINE Alu -8 168 6 1891 141 31 0 chr10 34543807 34544098 -105772667 + AluJb SINE Alu 1 300 -12 2044 130 3 13 chr10 34544506 34544822 -105771943 + AluSp SINE Alu 1 313 0 1559 154 41 4 chr10 34545171 34545437 -105771328 - AluJo SINE Alu -36 276 1 21 36 0 0 chr10 34545461 34545489 -105771276 + AT_rich Low_complexity Low_complexity 1 28 0 1989 121 10 0 chr10 34545819 34546108 -105770657 + AluSx SINE Alu 1 292 -20 3374 73 0 0 chr10 34546653 34547076 -105769689 + L1PA8 LINE L1 5746 6168 -4 820 153 0 8 chr10 34547801 34547932 -105768833 - AluJo SINE Alu -176 136 7 1122 140 68 110 chr10 34548014 34548278 -105768487 + LTR26B LTR ERV1 1 253 -278 979 196 12 0 chr10 34548275 34548438 -105768327 + LTR26B LTR ERV1 367 531 0 * 188 303 0 45 chr10 34548633 34548699 -105768066 - L2 LINE L2 -5 3308 3246 5223 188 45 17 chr10 34548980 34550556 -105766209 - MER52A LTR ERV1 0 1755 1 242 234 0 52 chr10 34550770 34550818 -105765947 + MLT1K LTR MaLR 513 557 -31 2393 126 27 30 chr10 34550818 34551198 -105765567 + MER57A LTR ERV1 1 381 -22 1887 161 0 0 chr10 34551198 34551508 -105765257 - AluSx SINE Alu -2 310 1 2393 126 27 30 chr10 34551508 34551531 -105765234 + MER57A LTR ERV1 381 403 0 242 234 0 52 chr10 34551531 34551559 -105765206 + MLT1K LTR MaLR 557 585 -3 2163 108 3 6 chr10 34551561 34551875 -105764890 + AluSp SINE Alu 1 313 0 1978 121 0 26 chr10 34552176 34552483 -105764282 - AluSg SINE Alu -11 299 1 1536 155 86 17 chr10 34553071 34553361 -105763404 + AluJo SINE Alu 3 312 0 716 124 0 0 chr10 34553387 34553500 -105763265 + L1MA5A LINE L1 6185 6297 0 2208 108 0 0 chr10 34553597 34553902 -105762863 + AluSg SINE Alu 1 305 -5 3313 145 97 26 chr10 34554169 34554447 -105762318 - LTR51 LTR ERV1 0 671 414 2003 122 0 10 chr10 34554447 34554771 -105761994 + AluSg SINE Alu 1 310 0 3313 145 97 26 chr10 34554771 34555118 -105761647 - LTR51 LTR ERV1 -257 414 1 2149 86 4 0 chr10 34555206 34555517 -105761248 + AluSg SINE Alu 1 312 0 1868 154 10 0 chr10 34556415 34556721 -105760044 - AluJo SINE Alu -1 311 3 1466 110 169 12 chr10 34557279 34557533 -105759232 + AluSg1 SINE Alu 1 294 -15 2437 63 0 0 chr10 34557664 34557963 -105758802 - AluY SINE Alu -12 299 1 480 212 229 0 chr10 34558479 34558649 -105758116 - MER3 DNA MER1_type 0 209 1 353 250 221 15 chr10 34558671 34558807 -105757958 + MER5A DNA MER1_type 26 189 0 2792 114 17 60 chr10 34558823 34559444 -105757321 + MER4E LTR ERV1 1 766 0 489 143 24 0 chr10 34559571 34559655 -105757110 + LTR56 LTR ERV1 1 86 -359 2337 101 116 11 chr10 34559655 34560051 -105756714 - MER61C LTR ERV1 0 434 13 863 114 8 0 chr10 34560050 34560173 -105756592 + LTR56 LTR ERV1 81 204 -241 * 2246 101 0 0 chr10 34660216 34660503 -105656262 - AluSx SINE Alu -15 297 11 24 0 0 0 chr10 34661312 34661336 -105655429 + AT_rich Low_complexity Low_complexity 1 24 0 296 303 114 8 chr10 34661504 34661636 -105655129 - MIR SINE MIR 0 262 117 432 233 48 20 chr10 34662062 34662208 -105654557 + MER103 DNA DNA 2 151 -15 1848 146 46 4 chr10 34662477 34662758 -105654007 - AluJb SINE Alu -15 297 5 313 309 74 28 chr10 34662809 34662971 -105653794 + L1ME4a LINE L1 5707 5883 -238 2270 113 3 0 chr10 34662971 34663272 -105653493 + AluSx SINE Alu 3 304 -8 313 309 74 28 chr10 34663272 34663326 -105653439 + L1ME4a LINE L1 5883 5933 -188 203 247 0 24 chr10 34663336 34663364 -105653401 + A-rich Low_complexity Low_complexity 2 29 -55 1712 179 7 3 chr10 34663364 34663649 -105653116 + AluJo SINE Alu 1 286 -26 203 247 0 24 chr10 34663649 34663705 -105653060 + A-rich Low_complexity Low_complexity 29 84 0 1479 78 16 0 chr10 34664122 34664314 -105652451 - AluY SINE Alu -9 302 108 1339 119 115 9 chr10 34664450 34664676 -105652089 + AluSx SINE Alu 56 305 -7 234 0 0 0 chr10 34664797 34664823 -105651942 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1978 102 0 24 chr10 34664834 34665158 -105651607 + AluY SINE Alu 1 317 0 509 308 111 31 chr10 34666347 34666672 -105650093 + MLT1I LTR MaLR 59 409 0 2387 190 90 25 chr10 34666900 34667186 -105649579 + L1MA6 LINE L1 5372 5638 -660 264 30 0 0 chr10 34667186 34667219 -105649546 + (CA)n Simple_repeat Simple_repeat 2 34 0 2387 190 90 25 chr10 34667219 34667690 -105649075 + L1MA6 LINE L1 5638 6267 -31 1574 190 57 9 chr10 34667690 34668021 -105648744 - MER7A DNA MER2_type -1 345 1 2387 190 90 25 chr10 34668021 34668053 -105648712 + L1MA6 LINE L1 6267 6295 -3 963 273 45 36 chr10 34669198 34669557 -105647208 + MLT1I LTR MaLR 40 401 -8 486 340 79 23 chr10 34670025 34670430 -105646335 - L2 LINE L2 -237 3035 2545 1310 117 0 0 chr10 34671324 34671503 -105645262 + AluSq SINE Alu 132 310 -3 182 364 85 0 chr10 34672356 34672485 -105644280 - L2 LINE L2 -278 2994 2855 695 213 173 6 chr10 34672487 34672925 -105643840 + MLT1F1 LTR MaLR 1 567 0 391 279 66 90 chr10 34673075 34673183 -105643582 + MLT1F1-int LTR MaLR 308 417 -954 2195 77 30 7 chr10 34673183 34673480 -105643285 + AluSc SINE Alu 1 304 -5 391 279 66 90 chr10 34673480 34673672 -105643093 + MLT1F1-int LTR MaLR 417 601 -770 262 346 34 22 chr10 34673907 34674086 -105642679 + MLT1F1-int LTR MaLR 699 879 -492 954 266 117 19 chr10 34674606 34675035 -105641730 - MER20B DNA MER1_type -312 471 1 1905 306 152 25 chr10 34675298 34676186 -105640579 + L2 LINE L2 75 1173 -2141 2335 95 7 3 chr10 34676186 34676491 -105640274 - AluSq SINE Alu -7 306 1 1905 306 152 25 chr10 34676491 34676868 -105639897 + L2 LINE L2 1173 1501 -1813 250 203 31 16 chr10 34676924 34676988 -105639777 - L2 LINE L2 -1686 1628 1564 1753 254 85 25 chr10 34677066 34677758 -105639007 - L1MEc LINE L1 -5483 913 180 1081 268 282 32 chr10 34677820 34678887 -105637878 + L2 LINE L2 1729 3070 -243 814 167 7 0 chr10 34678924 34679097 -105637668 + AluJb SINE Alu 145 318 0 30 27 0 0 chr10 34679917 34679954 -105636811 + AT_rich Low_complexity Low_complexity 1 37 0 331 299 249 28 chr10 34680299 34680476 -105636289 - MIR SINE MIR -20 242 27 267 158 53 0 chr10 34681033 34681090 -105635675 - MER116 DNA Mariner -3 77 18 1579 146 117 10 chr10 34681232 34681541 -105635224 - MER46B DNA MER2_type 0 236 20 1050 152 71 10 chr10 34682651 34682848 -105633917 - MER3 DNA MER1_type 0 209 1 2085 96 0 42 chr10 34682904 34683217 -105633548 - AluSg SINE Alu -10 300 1 2363 82 3 0 chr10 34683610 34683903 -105632862 + AluSg SINE Alu 1 294 -16 2216 108 0 16 chr10 34684262 34684569 -105632196 - AluSq SINE Alu -11 302 1 2414 50 0 0 chr10 34684775 34685079 -105631686 - AluY SINE Alu 0 304 1 263 237 53 0 chr10 34685985 34686061 -105630704 - L1MC4 LINE L1 -40 8002 7923 2295 114 0 0 chr10 34686162 34686468 -105630297 - AluSx SINE Alu -6 306 1 240 111 0 0 chr10 34686523 34686559 -105630206 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1076 249 189 38 chr10 34686559 34686898 -105629867 - L1MC4 LINE L1 -507 7535 7249 2236 95 7 3 chr10 34686898 34687194 -105629571 - AluY SINE Alu -14 297 1 1076 249 189 38 chr10 34687194 34687231 -105629534 - L1MC4 LINE L1 -793 7249 7219 1216 52 0 0 chr10 34687231 34687384 -105629381 - L1PA5 LINE L1 -4 6150 5998 1076 249 189 38 chr10 34687384 34687417 -105629348 - L1MC4 LINE L1 -823 7219 7192 2362 100 0 0 chr10 34687417 34687716 -105629049 - AluSx SINE Alu -13 299 1 1076 249 189 38 chr10 34687716 34688021 -105628744 - L1MC4 LINE L1 -850 7192 6934 504 86 0 0 chr10 34688021 34688091 -105628674 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1076 249 189 38 chr10 34688091 34688133 -105628632 - L1MC4 LINE L1 -1108 6934 6661 2166 265 49 9 chr10 34688190 34688949 -105627816 + L1MD2 LINE L1 4416 5204 -942 1506 76 0 0 chr10 34688974 34689159 -105627606 + AluY SINE Alu 1 185 -126 596 78 0 0 chr10 34689159 34689236 -105627529 + AluY SINE Alu 218 294 -17 4102 194 49 50 chr10 34689240 34689348 -105627417 + L1MD2 LINE L1 5227 5334 -1025 2147 120 0 7 chr10 34689348 34689647 -105627118 + AluSx SINE Alu 1 297 -15 4102 194 49 50 chr10 34689647 34690004 -105626761 + L1MD2 LINE L1 5334 5690 -669 2093 138 7 0 chr10 34690004 34690308 -105626457 + AluSx SINE Alu 1 306 -6 4102 194 49 50 chr10 34690308 34690922 -105625843 + L1MD2 LINE L1 5690 6309 -50 2515 74 6 0 chr10 34691620 34691931 -105624834 + AluSp SINE Alu 1 313 0 1147 230 28 0 chr10 34692351 34692564 -105624201 + MER58A DNA MER1_type 3 221 -3 463 298 92 25 chr10 34693642 34693880 -105622885 + MIR SINE MIR 3 256 -6 264 30 0 0 chr10 34693997 34694030 -105622735 + (CA)n Simple_repeat Simple_repeat 2 34 0 371 237 45 87 chr10 34694098 34694350 -105622415 - L1MC4a LINE L1 -132 5989 5749 1831 123 38 34 chr10 34695244 34695536 -105621229 + AluSx SINE Alu 1 293 -19 4786 129 31 18 chr10 34695798 34696573 -105620192 + L1MA3 LINE L1 5521 6305 0 21 36 0 0 chr10 34696573 34696601 -105620164 + AT_rich Low_complexity Low_complexity 1 28 0 1027 85 0 0 chr10 34696713 34696843 -105619922 + FLAM_C SINE Alu 1 130 -3 400 253 26 113 chr10 34697019 34697052 -105619713 + MIR SINE MIR 2 36 -226 2173 139 0 0 chr10 34697052 34697355 -105619410 + AluSx SINE Alu 1 303 -9 400 253 26 113 chr10 34697355 34697515 -105619250 + MIR SINE MIR 36 178 -84 1843 115 4 4 chr10 34697774 34698027 -105618738 + AluSx SINE Alu 44 296 -16 468 290 52 5 chr10 34698085 34698168 -105618597 + L1MC4 LINE L1 7841 7919 -123 2592 49 0 10 chr10 34698168 34698476 -105618289 + AluY SINE Alu 1 305 -6 468 290 52 5 chr10 34698476 34698585 -105618180 + L1MC4 LINE L1 7919 8042 0 1711 145 148 6 chr10 34698749 34699067 -105617698 - Tigger7 DNA MER2_type 0 2487 2125 589 202 37 9 chr10 34699101 34699210 -105617555 - Tigger7 DNA MER2_type -621 112 1 377 282 87 29 chr10 34699230 34699436 -105617329 - L2 LINE L2 -409 2905 2688 533 227 34 84 chr10 34699615 34699853 -105616912 + L2 LINE L2 3084 3309 -4 267 314 204 40 chr10 34700449 34700748 -105616017 - L2 LINE L2 -19 3294 2947 2319 94 16 0 chr10 34700748 34701055 -105615710 + AluSx SINE Alu 1 312 0 21 36 0 0 chr10 34701122 34701150 -105615615 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 34701270 34701306 -105615459 + AT_rich Low_complexity Low_complexity 1 36 0 182 353 87 83 chr10 34701957 34702223 -105614542 + L2 LINE L2 2926 3192 -80 25 51 0 0 chr10 34702523 34702562 -105614203 + AT_rich Low_complexity Low_complexity 1 39 0 985 271 57 49 chr10 34702891 34703286 -105613479 + L2 LINE L2 2584 3057 -256 2029 232 67 14 chr10 34703289 34703949 -105612816 + L1ME2 LINE L1 5442 6154 -10 231 210 95 70 chr10 34703988 34704188 -105612577 + L1MC4 LINE L1 7826 8030 -12 365 298 149 0 chr10 34704230 34704411 -105612354 + L2 LINE L2 3106 3313 0 2128 114 0 0 chr10 34704520 34704800 -105611965 + AluSx SINE Alu 22 301 -11 579 308 157 26 chr10 34705536 34705994 -105610771 + L2 LINE L2 2125 2642 -672 988 234 62 14 chr10 34706511 34706802 -105609963 + L1MC4 LINE L1 7284 7588 -454 2164 98 3 14 chr10 34706822 34707118 -105609647 - AluSx SINE Alu -19 293 1 664 148 102 77 chr10 34707129 34707325 -105609440 + L1MC4 LINE L1 7839 8039 -3 290 277 18 66 chr10 34707573 34707739 -105609026 + MER103 DNA DNA 1 158 -8 1983 125 35 0 chr10 34707739 34708026 -105608739 - AluSx SINE Alu -15 297 1 1055 229 28 5 chr10 34708263 34708477 -105608288 + MER58A DNA MER1_type 2 220 -4 912 203 31 0 chr10 34708492 34708655 -105608110 - FAM SINE Alu -7 168 1 206 259 56 19 chr10 34708867 34708921 -105607844 - MIR SINE MIR -187 75 20 2022 146 20 65 chr10 34709874 34710271 -105606494 + L1MA4 LINE L1 5913 6291 -9 1768 146 7 44 chr10 34710672 34710967 -105605798 + AluSx SINE Alu 1 284 -28 1475 182 34 34 chr10 34711970 34712261 -105604504 + AluJb SINE Alu 1 291 -21 195 69 0 0 chr10 34712736 34712765 -105604000 + (TG)n Simple_repeat Simple_repeat 2 30 0 2300 72 3 3 chr10 34714642 34714933 -105601832 - AluSq SINE Alu -22 291 1 2237 106 0 3 chr10 34715926 34716229 -105600536 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr10 34717994 34718024 -105598741 + GC_rich Low_complexity Low_complexity 1 30 0 200 287 32 167 chr10 34720165 34720447 -105596318 - L2 LINE L2 -101 3171 2928 183 42 0 0 chr10 34720997 34721021 -105595744 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1689 162 20 14 chr10 34721023 34721320 -105595445 - AluJo SINE Alu -11 301 3 2342 97 0 3 chr10 34722797 34723097 -105593668 + AluSq SINE Alu 1 299 -14 189 0 0 0 chr10 34723318 34723339 -105593426 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2173 98 0 17 chr10 34723347 34723634 -105593131 - AluSx SINE Alu -30 282 1 2531 56 0 10 chr10 34723641 34723945 -105592820 - AluY SINE Alu -10 301 1 382 305 0 0 chr10 34724006 34724111 -105592654 + MIR SINE MIR 158 262 0 185 277 0 0 chr10 34724112 34724159 -105592606 + L2 LINE L2 3001 3047 -225 187 176 0 0 chr10 34724163 34724197 -105592568 + MIR SINE MIR 103 136 -72 307 323 213 0 chr10 34724286 34724450 -105592315 - MIR SINE MIR 0 262 64 2223 125 3 0 chr10 34724472 34724784 -105591981 + AluSp SINE Alu 1 313 0 321 349 32 24 chr10 34725144 34725270 -105591495 - L2 LINE L2 -1 3271 3145 1388 96 0 0 chr10 34725892 34726069 -105590696 + AluY SINE Alu 122 298 -13 2911 135 43 22 chr10 34726303 34726763 -105590002 + MER1A DNA MER1_type 60 529 0 2118 99 50 17 chr10 34727206 34727508 -105589257 - AluSx SINE Alu 0 312 1 1066 48 0 0 chr10 34728301 34728425 -105588340 + AluY SINE Alu 2 125 -186 2438 110 48 28 chr10 34728797 34729153 -105587612 + THE1B LTR MaLR 1 363 -1 2068 127 3 3 chr10 34729214 34729506 -105587259 + AluSp SINE Alu 4 295 -18 1362 154 162 18 chr10 34729623 34729895 -105586870 - AluSx SINE Alu -1 311 1 1653 159 16 41 chr10 34730378 34730480 -105586285 + L1MB3 LINE L1 5582 5685 -498 2144 139 0 0 chr10 34730480 34730789 -105585976 - AluSg SINE Alu -1 309 1 1653 159 16 41 chr10 34730789 34731001 -105585764 + L1MB3 LINE L1 5685 5888 -295 685 90 0 11 chr10 34731081 34731170 -105585595 + AluSp SINE Alu 64 151 -162 509 164 100 1 chr10 34731176 34731279 -105585486 - MLT1B LTR MaLR -269 112 1 231 111 0 0 chr10 34731279 34731315 -105585450 - L1M3 LINE L1 -243 5928 5893 2242 125 0 3 chr10 34731354 34731665 -105585100 + AluSx SINE Alu 1 310 -2 742 244 78 5 chr10 34731688 34731893 -105584872 + MLT1A2 LTR MaLR 155 374 0 1575 120 32 16 chr10 34731897 34732147 -105584618 + L1MB3 LINE L1 5928 6181 -2 408 291 213 0 chr10 34732823 34732964 -105583801 + MER5A DNA MER1_type 19 189 0 226 374 11 0 chr10 34732964 34733050 -105583715 + MER5A DNA MER1_type 14 100 -89 1299 170 118 15 chr10 34733133 34733404 -105583361 + AluJo SINE Alu 5 303 -9 1829 125 15 95 chr10 34733404 34733731 -105583034 + AluSx SINE Alu 1 301 -11 456 19 0 0 chr10 34733733 34733786 -105582979 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 4588 78 9 0 chr10 34733845 34734394 -105582371 - MER41A LTR ERV1 0 554 1 282 264 89 47 chr10 34735396 34735486 -105581279 + MIR SINE MIR 2 102 -108 1994 130 0 7 chr10 34735486 34735771 -105580994 - AluJb SINE Alu -25 287 5 282 264 89 47 chr10 34735771 34735820 -105580945 + MIR SINE MIR 102 148 -62 2246 137 0 0 chr10 34735946 34736259 -105580506 - AluSq SINE Alu 0 313 1 193 111 0 0 chr10 34736259 34736286 -105580479 - MER5A DNA MER1_type -113 76 50 865 249 38 38 chr10 34736327 34736616 -105580149 - L1MC4a LINE L1 0 7808 7520 1040 155 59 5 chr10 34736674 34736993 -105579772 - AluJo SINE Alu 0 415 87 432 227 87 70 chr10 34737026 34737133 -105579632 - MER5A DNA MER1_type -1 188 84 2127 103 24 0 chr10 34737133 34737423 -105579342 - AluSx SINE Alu -13 299 3 2193 101 14 0 chr10 34737424 34737721 -105579044 - AluSx SINE Alu -11 301 1 432 227 87 70 chr10 34737721 34737796 -105578969 - MER5A DNA MER1_type -104 85 1 1467 166 46 53 chr10 34738587 34738889 -105577876 + AluJo SINE Alu 7 306 -6 2296 86 3 13 chr10 34738912 34739214 -105577551 - AluSp SINE Alu -14 299 1 1936 145 13 59 chr10 34739219 34739263 -105577502 - L1MB2 LINE L1 -2 6169 6125 192 111 0 0 chr10 34739263 34739299 -105577466 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1311 170 93 4 chr10 34739299 34739558 -105577207 - AluJo SINE Alu -30 282 1 1936 145 13 59 chr10 34739558 34739651 -105577114 - L1MB2 LINE L1 -45 6126 6030 1752 117 23 12 chr10 34739651 34739907 -105576858 - AluSq SINE Alu -54 259 1 1936 145 13 59 chr10 34739907 34740140 -105576625 - L1MB2 LINE L1 -141 6030 5814 710 108 0 0 chr10 34740142 34740244 -105576521 - AluY SINE Alu 0 311 210 1176 147 84 0 chr10 34740246 34740436 -105576329 - L1MB2 LINE L1 -358 5813 5608 2467 66 3 0 chr10 34740439 34740741 -105576024 - AluY SINE Alu -8 303 1 1464 214 3 3 chr10 34740747 34741046 -105575719 - AluJo SINE Alu -13 299 1 570 232 46 0 chr10 34741046 34741197 -105575568 - L1MB2 LINE L1 -979 5167 5010 24 0 0 0 chr10 34741197 34741221 -105575544 + AT_rich Low_complexity Low_complexity 1 24 0 2128 105 3 14 chr10 34741221 34741517 -105575248 - AluSx SINE Alu -14 298 6 2144 133 0 3 chr10 34741524 34741832 -105574933 - AluSx SINE Alu -5 307 1 1731 232 112 18 chr10 34741832 34742236 -105574529 - L1 LINE L1 -1347 4799 4434 1949 129 34 3 chr10 34742236 34742531 -105574234 - AluSq SINE Alu -9 304 1 1731 232 112 18 chr10 34742531 34742558 -105574207 - L1 LINE L1 -1712 4434 4411 345 47 0 0 chr10 34742558 34742601 -105574164 + (TG)n Simple_repeat Simple_repeat 2 44 0 1731 232 112 18 chr10 34742601 34742855 -105573910 - L1 LINE L1 -1735 4411 4009 2767 192 62 114 chr10 34742877 34743289 -105573476 - MER21B LTR ERV1 -54 809 462 2380 95 3 0 chr10 34743289 34743595 -105573170 - AluSp SINE Alu -6 307 1 2767 192 62 114 chr10 34743595 34744035 -105572730 - MER21B LTR ERV1 -401 462 1 1165 205 27 4 chr10 34744036 34744299 -105572466 - L1 LINE L1 -2144 4002 3734 1684 123 67 8 chr10 34744310 34744563 -105572202 + AluSx SINE Alu 1 268 -44 428 236 107 36 chr10 34745105 34745117 -105571648 + MER63 DNA MER1_type 908 918 -143 207 0 0 0 chr10 34745117 34745140 -105571625 + (TA)n Simple_repeat Simple_repeat 2 24 0 2040 119 7 27 chr10 34745141 34745435 -105571330 - AluSx SINE Alu -23 289 2 428 236 107 36 chr10 34745435 34745560 -105571205 + MER63 DNA MER1_type 917 1057 -4 2340 78 20 0 chr10 34745763 34746059 -105570706 + AluSg SINE Alu 1 302 -8 492 287 63 23 chr10 34746126 34746300 -105570465 - MIR SINE MIR -49 213 33 2264 107 0 7 chr10 34746571 34746871 -105569894 + AluSx SINE Alu 1 298 -14 286 253 171 19 chr10 34747130 34747288 -105569477 + MIR SINE MIR 16 197 -65 1713 258 220 9 chr10 34747967 34748904 -105567861 + L2 LINE L2 2176 3312 -1 189 0 0 0 chr10 34749700 34749721 -105567044 + (T)n Simple_repeat Simple_repeat 1 21 0 270 212 64 25 chr10 34750783 34750901 -105565864 + MIR SINE MIR 15 141 -67 2251 118 10 0 chr10 34751804 34752110 -105564655 + AluSx SINE Alu 2 310 -2 2078 120 14 0 chr10 34752259 34752550 -105564215 - AluSq SINE Alu -16 297 3 2069 95 46 11 chr10 34756613 34756746 -105560019 + AluSg SINE Alu 1 128 -182 2281 92 0 29 chr10 34756746 34757062 -105559703 + AluY SINE Alu 1 307 -4 2069 95 46 11 chr10 34757062 34757213 -105559552 + AluSg SINE Alu 128 295 -15 471 230 61 97 chr10 34757354 34757490 -105559275 + MIR3 SINE MIR 12 138 -70 2199 117 0 3 chr10 34757490 34757799 -105558966 + AluSx SINE Alu 1 308 -4 471 230 61 97 chr10 34757799 34757868 -105558897 + MIR3 SINE MIR 138 208 0 216 263 9 97 chr10 34758205 34758319 -105558446 - MIR3 SINE MIR -3 205 102 474 315 80 41 chr10 34758472 34758786 -105557979 + L3 LINE CR1 1155 1480 -97 1991 116 0 33 chr10 34758829 34759131 -105557634 - AluJb SINE Alu -20 292 1 284 53 0 0 chr10 34759350 34759388 -105557377 - AluSx SINE Alu -9 291 254 1662 98 0 5 chr10 34759388 34759603 -105557162 - AluSx SINE Alu -98 214 1 2270 12 0 0 chr10 34759633 34759880 -105556885 - AluYa5 SINE Alu -2 309 63 610 196 120 120 chr10 34760054 34760330 -105556435 + MER46C DNA MER2_type 3 281 -57 2424 76 7 3 chr10 34760330 34760634 -105556131 + AluSg SINE Alu 1 305 -5 610 196 120 120 chr10 34760634 34760658 -105556107 + MER46C DNA MER2_type 280 303 -35 1920 108 16 0 chr10 34761462 34761720 -105555045 + AluSx SINE Alu 29 290 -22 2217 102 0 0 chr10 34761720 34762004 -105554761 + AluSg1 SINE Alu 1 284 -25 2434 76 0 0 chr10 34762398 34762699 -105554066 - AluY SINE Alu -10 301 1 1155 84 0 0 chr10 34762699 34762842 -105553923 - AluSq/x SINE Alu -170 143 1 776 113 0 81 chr10 34763159 34763283 -105553482 - AluSq/x SINE Alu -198 115 2 2230 112 0 7 chr10 34763608 34763911 -105552854 - AluSx SINE Alu -11 301 1 1723 161 46 3 chr10 34764189 34764474 -105552291 + AluJb SINE Alu 1 297 -15 2304 139 54 81 chr10 34765066 34765261 -105551504 + Tigger2a DNA MER2_type 1 200 -2508 1812 170 28 0 chr10 34765261 34765549 -105551216 - AluJb SINE Alu -16 296 1 2304 139 54 81 chr10 34765549 34765799 -105550966 + Tigger2a DNA MER2_type 200 434 0 184 346 49 12 chr10 34765826 34765907 -105550858 + L3b LINE CR1 1426 1509 -74 204 40 0 0 chr10 34767410 34767435 -105549330 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2145 110 4 0 chr10 34767437 34767718 -105549047 - AluSx SINE Alu -30 282 1 1400 145 32 119 chr10 34770246 34770591 -105546174 - AluYb8 SINE Alu -3 315 1 444 143 0 0 chr10 34770749 34770819 -105545946 + AluS SINE Alu 2 71 -247 771 281 37 53 chr10 34770953 34771252 -105545513 + L1MA9 LINE L1 1079 1372 -5726 2293 97 3 0 chr10 34771259 34771559 -105545206 + AluSg SINE Alu 1 301 -9 1473 301 31 4 chr10 34771977 34772432 -105544333 + L1MA9 LINE L1 1655 2121 -5047 * 2205 199 26 16 chr10 34772430 34772999 -105543766 + L1MA9 LINE L1 3756 4330 -2837 2205 113 7 3 chr10 34772999 34773309 -105543456 + AluSp SINE Alu 2 312 -1 1956 177 0 0 chr10 34773321 34773632 -105543133 + AluJb SINE Alu 1 311 -1 246 128 0 0 chr10 34773635 34773674 -105543091 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 4732 157 32 59 chr10 34773674 34775281 -105541484 + L1MA9 LINE L1 5382 6957 -376 693 61 0 0 chr10 34775281 34775363 -105541402 + Alu SINE Alu 221 302 -10 1624 173 17 75 chr10 34775363 34775402 -105541363 + L1MA9 LINE L1 6947 6987 -346 2280 123 0 0 chr10 34775402 34775712 -105541053 + AluSx SINE Alu 1 310 -2 1624 173 17 75 chr10 34775712 34776083 -105540682 + L1MA9 LINE L1 6987 7333 0 267 207 142 34 chr10 34776206 34776326 -105540439 - L1ME LINE L1 -702 5452 5328 970 306 41 71 chr10 34776339 34777025 -105539740 - HERV16 LTR ERVL -3761 1235 571 314 254 172 8 chr10 34777068 34777202 -105539563 + L1ME LINE L1 5319 5474 -696 286 196 0 0 chr10 34777305 34777361 -105539404 - L1MA9 LINE L1 0 6312 6257 2094 113 0 3 chr10 34777569 34777899 -105538866 + AluSg SINE Alu 1 329 0 2324 92 7 13 chr10 34777901 34778207 -105538558 + AluSp SINE Alu 3 306 -7 1979 242 79 50 chr10 34778209 34778366 -105538399 + L1M2 LINE L1 1622 1773 -4442 2365 90 0 3 chr10 34778366 34778666 -105538099 + AluY SINE Alu 1 299 -12 1979 242 79 50 chr10 34778666 34778966 -105537799 + L1M2 LINE L1 1773 2063 -4152 2221 123 0 0 chr10 34778966 34779268 -105537497 + AluSx SINE Alu 1 302 -10 1979 242 79 50 chr10 34779268 34779793 -105536972 + L1M2 LINE L1 2063 2547 -3668 1009 160 0 0 chr10 34779796 34779952 -105536813 + Tigger1 DNA MER2_type 2 157 -2261 934 141 141 5 chr10 34779947 34780132 -105536633 + Tigger1 DNA MER2_type 2208 2417 -1 * 638 229 10 44 chr10 34780133 34780253 -105536512 + L1M2 LINE L1 2548 2671 -3544 2013 218 33 81 chr10 34780253 34780376 -105536389 - LTR9 LTR ERV1 0 612 485 10498 57 15 40 chr10 34780376 34781792 -105534973 + SVA Other Other 6 1386 0 189 0 0 0 chr10 34781799 34781820 -105534945 + (GA)n Simple_repeat Simple_repeat 2 22 0 2013 218 33 81 chr10 34781820 34782329 -105534436 - LTR9 LTR ERV1 -133 479 3 638 229 10 44 chr10 34782329 34782413 -105534352 + L1M2 LINE L1 2671 2745 -3470 1325 217 68 8 chr10 34782933 34783301 -105533464 + L1M2 LINE L1 2739 3128 -3087 2107 121 4 0 chr10 34783301 34783582 -105533183 + AluSp SINE Alu 1 282 -31 321 26 0 0 chr10 34783585 34783623 -105533142 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3155 145 42 70 chr10 34783627 34784298 -105532467 + LTR8 LTR ERV1 40 691 0 2315 101 0 3 chr10 34784574 34784882 -105531883 - AluSg SINE Alu -3 307 1 1415 90 0 94 chr10 34784939 34785162 -105531603 + AluSp SINE Alu 89 290 -23 803 197 35 0 chr10 34785177 34785319 -105531446 - FRAM SINE Alu -31 145 1 1968 135 34 3 chr10 34786000 34786296 -105530469 + AluSx SINE Alu 4 308 -4 277 105 0 88 chr10 34786414 34786471 -105530294 + MER75 DNA T2_type 453 504 0 1934 165 29 64 chr10 34786554 34787125 -105529640 + MLT2A2 LTR ERVL 1 554 0 747 149 0 0 chr10 34787588 34787695 -105529070 - FLAM_C SINE Alu -35 108 2 1644 174 0 10 chr10 34787733 34788021 -105528744 + AluJo SINE Alu 1 285 -27 1890 103 62 35 chr10 34788027 34788317 -105528448 - AluSg SINE Alu -12 298 1 2408 32 7 4 chr10 34788614 34788928 -105527837 - AluY SINE Alu 0 317 3 2114 101 7 39 chr10 34789193 34789499 -105527266 + AluSp SINE Alu 1 296 -17 988 175 0 44 chr10 34789793 34789976 -105526789 - FRAM SINE Alu -2 174 1 908 163 51 17 chr10 34789979 34790157 -105526608 - MLT1E2 LTR MaLR -440 186 3 2333 67 0 14 chr10 34790373 34790700 -105526065 + AluY SINE Alu 1 311 0 567 99 12 0 chr10 34790700 34790781 -105525984 - MER6A DNA MER2_type -107 498 417 1768 185 23 31 chr10 34790782 34790828 -105525937 - L1 LINE L1 -1780 4366 4321 1415 196 10 20 chr10 34790828 34791124 -105525641 - AluJo SINE Alu -19 293 1 1768 185 23 31 chr10 34791124 34791428 -105525337 - L1 LINE L1 -1825 4321 4019 2630 141 18 18 chr10 34791428 34791692 -105525073 - MER6A DNA MER2_type -429 436 170 3056 82 0 0 chr10 34791692 34792056 -105524709 + THE1B LTR MaLR 1 364 0 2630 141 18 18 chr10 34792056 34792225 -105524540 - MER6A DNA MER2_type -694 171 3 1904 138 50 0 chr10 34792759 34793056 -105523709 - AluSx SINE Alu 0 312 1 472 181 87 27 chr10 34793154 34793303 -105523462 - MER113 DNA MER1_type? -280 241 84 186 338 0 12 chr10 34793520 34793600 -105523165 - L2 LINE L2 -53 3219 3141 1974 138 35 0 chr10 34793630 34793919 -105522846 - AluSx SINE Alu -13 299 1 2071 132 30 0 chr10 34794017 34794312 -105522453 - AluSx SINE Alu -8 304 1 3210 94 2 48 chr10 34794323 34794822 -105521943 - L1PA15 LINE L1 -5 6160 5685 4142 124 58 27 chr10 34794822 34795796 -105520969 - MER11A LTR ERVK -3 1263 1 1653 70 10 0 chr10 34795797 34796171 -105520594 - L1P4 LINE L1 -473 5692 5276 1053 157 61 5 chr10 34796394 34796592 -105520173 - Tigger4(Zombi) DNA MER2_type 0 2731 2523 1023 155 117 0 chr10 34796626 34796832 -105519933 - MER46B DNA MER2_type -131 105 1 1980 151 0 46 chr10 34797868 34798002 -105518763 + AluJo SINE Alu 1 140 -172 2226 125 0 0 chr10 34798002 34798298 -105518467 + AluSq SINE Alu 1 296 -17 1980 151 0 46 chr10 34798298 34798488 -105518277 + AluJo SINE Alu 140 310 -2 514 317 67 5 chr10 34798489 34798595 -105518170 - MIR SINE MIR -12 250 152 189 0 0 0 chr10 34798595 34798616 -105518149 + (TTG)n Simple_repeat Simple_repeat 1 21 0 514 317 67 5 chr10 34798616 34798717 -105518048 - MIR SINE MIR -110 152 30 898 202 11 65 chr10 34799434 34799549 -105517216 + LTR37B LTR ERV1 199 319 -149 1512 161 115 14 chr10 34799549 34799684 -105517081 + AluJo SINE Alu 1 121 -191 1934 127 67 0 chr10 34799684 34799968 -105516797 + AluSx SINE Alu 1 303 -9 1512 161 115 14 chr10 34799968 34800111 -105516654 + AluJo SINE Alu 121 307 -5 898 202 11 65 chr10 34800111 34800257 -105516508 + LTR37B LTR ERV1 319 446 -22 2177 126 79 15 chr10 34800374 34800716 -105516049 + THE1B LTR MaLR 1 364 0 255 360 56 0 chr10 34800716 34800805 -105515960 + MER91A DNA MER1_type 80 173 -23 1873 143 21 3 chr10 34800819 34800943 -105515822 + AluJb SINE Alu 5 125 -187 195 42 0 0 chr10 34800943 34800967 -105515798 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1873 143 21 3 chr10 34800967 34801128 -105515637 + AluJb SINE Alu 125 295 -17 236 234 21 0 chr10 34801160 34801207 -105515558 + MER91A DNA MER1_type 148 195 -1 2173 116 3 0 chr10 34801492 34801786 -105514979 + AluSx SINE Alu 1 295 -17 1608 187 0 32 chr10 34801792 34802108 -105514657 + AluJb SINE Alu 3 308 -4 1758 164 0 21 chr10 34802341 34802628 -105514137 + AluJb SINE Alu 6 286 -26 2368 93 3 6 chr10 34802853 34803165 -105513600 + AluSq SINE Alu 1 311 -2 1603 138 19 30 chr10 34803393 34803662 -105513103 - AluJo SINE Alu -46 266 1 322 296 10 10 chr10 34803773 34803871 -105512894 + MER5A DNA MER1_type 9 106 -83 428 182 11 0 chr10 34803900 34803988 -105512777 - FLAM_A SINE Alu -53 89 1 908 183 21 5 chr10 34804474 34804660 -105512105 - MER5A DNA MER1_type 0 189 1 605 165 0 19 chr10 34804660 34804763 -105512002 + FRAM SINE Alu 63 163 -13 8118 45 0 16 chr10 34804771 34805853 -105510912 + L1PA5 LINE L1 4408 5466 -711 2629 46 3 3 chr10 34805853 34806159 -105510606 + AluY SINE Alu 1 306 -5 8118 45 0 16 chr10 34806159 34806860 -105509905 + L1PA5 LINE L1 5466 6177 0 1726 158 70 15 chr10 34807445 34807787 -105508978 - MLT1A1 LTR MaLR 0 365 5 2329 72 0 23 chr10 34808102 34808406 -105508359 - AluY SINE Alu -14 297 1 376 250 8 42 chr10 34808478 34808598 -105508167 - L1ME4a LINE L1 -265 5856 5741 17091 67 9 6 chr10 34908939 34911273 -105405492 - L1P LINE L1 -2819 3327 988 17845 56 18 0 chr10 34911375 34913673 -105403092 + L1P LINE L1 437 2775 -3371 2008 81 44 7 chr10 34913673 34913945 -105402820 + AluY SINE Alu 1 282 -29 3131 153 40 13 chr10 34914045 34914837 -105401928 - L1M2 LINE L1 -697 5594 4783 18471 58 7 3 chr10 34914854 34918052 -105398713 - L1PA7 LINE L1 -13 6141 2934 6811 153 9 15 chr10 34918152 34918495 -105398270 - L1P4 LINE L1 -504 5664 5321 2151 92 7 36 chr10 34918495 34918800 -105397965 - AluSx SINE Alu -16 296 1 6811 153 9 15 chr10 34918800 34920036 -105396729 - L1P4 LINE L1 -847 5321 4086 214 367 112 24 chr10 34920040 34920209 -105396556 + MER5A DNA MER1_type 2 185 -4 1029 233 75 130 chr10 34920553 34921353 -105395412 - LTR41 LTR ERVL -10 763 8 447 229 146 35 chr10 34922778 34922922 -105393843 - MER3 DNA MER1_type 0 209 50 771 274 39 47 chr10 34923297 34923552 -105393213 - MIR SINE MIR -4 258 6 22 70 0 0 chr10 34923934 34923977 -105392788 + AT_rich Low_complexity Low_complexity 1 43 0 1715 170 7 10 chr10 34923977 34924283 -105392482 - AluJo SINE Alu -6 306 2 2352 80 6 46 chr10 34925600 34925925 -105390840 - AluSx SINE Alu 0 312 1 538 243 88 17 chr10 34926663 34926844 -105389921 - L1M4 LINE L1 -6167 862 669 6874 203 45 25 chr10 34927276 34928603 -105388162 - L1MC2 LINE L1 -9 6335 5036 2220 80 25 0 chr10 34928603 34928889 -105387876 - AluSg SINE Alu -17 293 1 6874 203 45 25 chr10 34928889 34930542 -105386223 - L1MC2 LINE L1 -1308 5036 3295 6965 208 60 74 chr10 34930546 34931705 -105385060 - L1 LINE L1 -1932 4450 3276 195 42 0 0 chr10 34931705 34931729 -105385036 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 802 221 7 0 chr10 34931729 34931874 -105384891 - FRAM SINE Alu -30 146 1 6965 208 60 74 chr10 34931874 34933595 -105383170 - L1 LINE L1 -3105 3277 1223 765 139 0 0 chr10 34933595 34933717 -105383048 - L1PB4 LINE L1 -7 6149 6028 6965 208 60 74 chr10 34933717 34933916 -105382849 - L1 LINE L1 -5159 1223 1023 * 38251 50 5 2 chr10 34933887 34939547 -105377218 - L1PA4 LINE L1 -1 6390 713 27 29 0 0 chr10 34939853 34939887 -105376878 + AT_rich Low_complexity Low_complexity 1 34 0 5488 159 20 28 chr10 34940250 34941820 -105374945 - L1MA5 LINE L1 -6 6294 4743 267 79 0 0 chr10 34941827 34941865 -105374900 + (TG)n Simple_repeat Simple_repeat 1 38 0 1116 145 0 17 chr10 34941866 34942038 -105374727 - FRAM SINE Alu -14 162 1 1629 188 23 50 chr10 34942038 34942630 -105374135 - L1M4 LINE L1 -1400 4746 4194 383 313 49 6 chr10 34942835 34942998 -105373767 - L1M4 LINE L1 -6282 464 295 243 0 0 0 chr10 34943030 34943057 -105373708 + (T)n Simple_repeat Simple_repeat 1 27 0 431 320 99 27 chr10 34943071 34943405 -105373360 + L1M4 LINE L1 4598 4955 -1191 718 225 21 27 chr10 34944132 34944319 -105372446 - MER5A DNA MER1_type -1 188 3 1846 141 0 3 chr10 34944543 34944834 -105371931 - MER47A DNA MER2_type -2 364 75 498 179 0 0 chr10 34945067 34945162 -105371603 + (TA)n Simple_repeat Simple_repeat 1 95 0 312 276 0 31 chr10 34945083 34945161 -105371604 - L1MC4 LINE L1 -1340 6702 6626 * 2469 75 0 0 chr10 34945161 34945455 -105371310 - AluSp SINE Alu -19 294 1 312 276 0 31 chr10 34945455 34945474 -105371291 - L1MC4 LINE L1 -1416 6626 6608 1501 188 36 14 chr10 34945530 34945806 -105370959 + AluJo SINE Alu 1 282 -30 28 29 0 0 chr10 34945824 34945859 -105370906 + AT_rich Low_complexity Low_complexity 1 35 0 431 321 117 0 chr10 34947472 34947668 -105369097 + L2 LINE L2 692 910 -2404 283 344 29 48 chr10 34947718 34947880 -105368885 + L2 LINE L2 1428 1587 -1727 1624 169 7 17 chr10 34947880 34948194 -105368571 - AluJb SINE Alu 0 311 1 283 344 29 48 chr10 34948194 34948302 -105368463 + L2 LINE L2 1587 1695 -1619 1083 345 95 16 chr10 34948710 34949449 -105367316 + L2 LINE L2 1815 2611 -703 2024 106 0 10 chr10 34949647 34949950 -105366815 - L1PA14 LINE L1 0 6161 5862 352 330 48 9 chr10 34950323 34950553 -105366212 - L1M4 LINE L1 -6599 250 12 2342 96 0 3 chr10 34950790 34951093 -105365672 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 34951342 34951363 -105365402 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 34952317 34952339 -105364426 + AT_rich Low_complexity Low_complexity 1 22 0 213 108 0 0 chr10 34952842 34952879 -105363886 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 344 0 16 chr10 34953054 34953118 -105363647 + MIR SINE MIR 69 131 -131 2120 128 0 0 chr10 34954063 34954368 -105362397 + AluSx SINE Alu 1 305 -7 1279 238 102 83 chr10 34955092 34955479 -105361286 - MLT1E1 LTR MaLR -1 653 248 1590 178 3 31 chr10 34955479 34955766 -105360999 - AluJo SINE Alu -33 279 1 1279 238 102 83 chr10 34955766 34956016 -105360749 - MLT1E1 LTR MaLR -406 248 4 26 39 0 20 chr10 34956019 34956042 -105360723 + AT_rich Low_complexity Low_complexity 1 23 -27 1219 86 6 0 chr10 34956042 34956216 -105360549 - L1MA3 LINE L1 -1 6304 6130 26 39 0 20 chr10 34956216 34956243 -105360522 + AT_rich Low_complexity Low_complexity 23 50 0 1457 132 0 0 chr10 34956243 34956470 -105360295 - L1PB1 LINE L1 -8 6859 6633 3242 133 18 36 chr10 34956485 34957041 -105359724 - LTR10A LTR ERV1 -63 546 1 15146 187 22 4 chr10 34957085 34962207 -105354558 - L1PB1 LINE L1 -230 6637 1427 450 141 0 0 chr10 34962224 34962295 -105354470 - L1PB1 LINE L1 -5700 1163 1093 2611 234 83 25 chr10 34962297 34963183 -105353582 - L1PB1 LINE L1 -5816 1047 110 * 3396 108 40 6 chr10 34963160 34963688 -105353077 - L1MA3 LINE L1 -160 6861 6316 2261 102 0 0 chr10 34963689 34963983 -105352782 - AluSc SINE Alu -15 294 1 290 245 63 31 chr10 34964180 34964332 -105352433 - MLT1H LTR MaLR 0 586 428 545 282 60 34 chr10 34964332 34964566 -105352199 - MLT1H LTR MaLR -227 322 83 390 268 71 24 chr10 34964689 34964857 -105351908 - MLT1J LTR MaLR -2 509 334 2154 269 61 40 chr10 34965621 34966135 -105350630 - L1ME LINE L1 -4715 1365 863 1532 180 14 32 chr10 34966135 34966418 -105350347 - AluJo SINE Alu -20 292 15 2154 269 61 40 chr10 34966418 34967115 -105349650 - L1ME LINE L1 -5217 863 129 43913 36 6 3 chr10 34967117 34973254 -105343511 + L1PA3 LINE L1 1 6154 -1 843 173 12 36 chr10 34973265 34973433 -105343332 + FRAM SINE Alu 1 161 -15 359 261 130 0 chr10 34973445 34973560 -105343205 - L1ME LINE L1 -5935 135 6 22 0 0 0 chr10 34974215 34974237 -105342528 + AT_rich Low_complexity Low_complexity 1 22 0 404 305 102 28 chr10 34974683 34975047 -105341718 + L1ME4a LINE L1 5533 5923 -198 1314 181 0 9 chr10 34975068 34975294 -105341471 + AluJb SINE Alu 1 224 -88 233 167 56 0 chr10 34975308 34975434 -105341331 + (TA)n Simple_repeat Simple_repeat 1 133 0 224 40 80 0 chr10 34975481 34975531 -105341234 + (TA)n Simple_repeat Simple_repeat 2 55 0 2357 87 0 0 chr10 34976446 34976744 -105340021 - AluSc SINE Alu -11 298 1 215 284 177 21 chr10 34977188 34977329 -105339436 - MIR SINE MIR -71 191 29 2269 122 0 3 chr10 34977855 34978167 -105338598 - AluSq SINE Alu -2 311 1 225 121 0 0 chr10 34978245 34978278 -105338487 - L1PA7 LINE L1 -12 6142 6110 423 334 132 31 chr10 34978293 34978739 -105338026 + L2 LINE L2 2026 2516 -798 885 303 102 25 chr10 34978886 34979279 -105337486 - MLT1J1 LTR MaLR -23 423 1 2199 93 10 20 chr10 34979446 34979748 -105337017 - AluSx SINE Alu -13 299 1 250 216 40 27 chr10 34979962 34980036 -105336729 + MER41A LTR ERV1 397 471 -83 31 26 0 0 chr10 34980511 34980549 -105336216 + AT_rich Low_complexity Low_complexity 1 38 0 2399 90 0 3 chr10 34981306 34981617 -105335148 - AluSq SINE Alu -3 310 1 392 333 22 15 chr10 34982253 34982388 -105334377 - L2 LINE L2 -15 3257 3122 194 93 0 47 chr10 34982745 34982788 -105333977 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 351 320 101 28 chr10 34983364 34983611 -105333154 - L2 LINE L2 -4 3309 3045 1360 221 0 0 chr10 34984987 34985254 -105331511 - AluJb SINE Alu -9 303 37 2023 100 44 4 chr10 34985520 34985813 -105330952 + AluSg SINE Alu 1 304 0 3562 132 11 4 chr10 34986710 34987233 -105329532 - MER1A DNA MER1_type 0 527 1 632 237 79 0 chr10 34987977 34988129 -105328636 - MER68 LTR ERV1 0 562 399 389 321 76 43 chr10 34988578 34988855 -105327910 - L3b LINE CR1 -196 1387 1102 393 141 0 0 chr10 34989845 34989916 -105326849 + (TCC)n Simple_repeat Simple_repeat 3 73 0 306 0 0 0 chr10 34990547 34990581 -105326184 + (TA)n Simple_repeat Simple_repeat 1 34 0 2417 83 10 0 chr10 34992916 34993218 -105323547 + AluSg SINE Alu 1 305 -5 2514 58 0 0 chr10 34993518 34993813 -105322952 - AluY SINE Alu -16 295 1 7028 56 1 1 chr10 34993816 34995292 -105321473 - L1PA7 LINE L1 -2 6152 4678 836 111 52 52 chr10 34995497 34995669 -105321096 - L1MB4 LINE L1 -15 6165 5994 1845 201 48 16 chr10 34995669 34996043 -105320722 - MSTD LTR MaLR -10 386 1 2513 228 41 21 chr10 34996052 34996311 -105320454 - L1M4 LINE L1 -1842 5723 5471 1757 168 103 28 chr10 34996311 34996709 -105320056 + MSTC LTR MaLR 1 428 0 2513 228 41 21 chr10 34996709 34997294 -105319471 - L1M4 LINE L1 -2094 5471 4862 3554 89 44 12 chr10 34997314 34997877 -105318888 - L1MA3 LINE L1 -7 6298 5718 7454 130 27 40 chr10 34997883 34998760 -105318005 - L1M4 LINE L1 -3382 4183 3297 186 103 0 0 chr10 34998760 34998789 -105317976 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7454 130 27 40 chr10 34998789 34999810 -105316955 - L1M4 LINE L1 -4268 3297 2306 1046 77 53 68 chr10 34999912 35000119 -105316646 + L1M1 LINE L1 3266 3469 -4096 * 1499 171 30 0 chr10 35000112 35000376 -105316389 - L1M4 LINE L1 -6195 1370 1099 611 134 42 8 chr10 35000373 35000492 -105316273 - L1M4 LINE L1 -7432 133 11 * 1070 220 84 21 chr10 35000494 35001007 -105315758 - L1 LINE L1 -2687 4480 3936 * 38117 70 8 3 chr10 35000996 35007117 -105309648 - L1PA5 LINE L1 -6 6148 1 848 154 11 6 chr10 35007118 35007293 -105309472 - L1 LINE L1 -4835 2263 2088 415 325 19 24 chr10 35007294 35007506 -105309259 - L1 LINE L1 -5221 1947 1737 257 323 32 25 chr10 35008651 35008809 -105307956 - L1 LINE L1 -5981 1117 959 2406 61 0 7 chr10 35008998 35009293 -105307472 + AluY SINE Alu 1 293 -18 324 309 149 11 chr10 35010076 35010251 -105306514 + MIR SINE MIR 61 259 -3 22 35 0 0 chr10 35010501 35010530 -105306235 + AT_rich Low_complexity Low_complexity 1 29 0 3316 144 29 15 chr10 35010728 35011346 -105305419 + L1MB2 LINE L1 5544 6170 -1 4134 156 76 32 chr10 35011429 35012875 -105303890 - L1MA7 LINE L1 0 6291 4783 26787 78 7 3 chr10 35012883 35017587 -105299178 - L1PA7 LINE L1 -3 6151 1433 9804 62 4 78 chr10 35018082 35019524 -105297241 - SVA Other Other 0 1386 52 234 0 0 0 chr10 35019524 35019550 -105297215 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 5868 130 53 23 chr10 35019550 35020996 -105295769 - L1PA7 LINE L1 -4686 1460 13 9691 190 40 41 chr10 35021002 35022599 -105294166 - L1MA7 LINE L1 -1351 4795 3198 2414 71 14 0 chr10 35022599 35022896 -105293869 - AluY SINE Alu -10 301 1 9691 190 40 41 chr10 35022896 35023652 -105293113 - L1MA7 LINE L1 -2948 3198 2443 254 25 0 50 chr10 35023652 35023692 -105293073 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7261 71 12 213 chr10 35023692 35025337 -105291428 - SVA Other Other -23 1363 51 180 0 0 0 chr10 35025340 35025360 -105291405 + (GGGAGA)n Simple_repeat Simple_repeat 1 20 0 9691 190 40 41 chr10 35025360 35025517 -105291248 - L1MA7 LINE L1 -3704 2442 2286 2122 74 0 0 chr10 35025517 35025774 -105290991 - AluSc SINE Alu -52 257 1 9691 190 40 41 chr10 35025774 35025939 -105290826 - L1MA7 LINE L1 -3860 2286 2116 2055 137 3 0 chr10 35025941 35026233 -105290532 - AluSx SINE Alu -19 293 1 3204 177 40 52 chr10 35026247 35027100 -105289665 + L1MA10 LINE L1 3875 4717 -1429 2221 97 0 32 chr10 35027106 35027415 -105289350 - AluSx SINE Alu -12 300 2 1000 112 0 0 chr10 35027416 35027550 -105289215 - AluSx SINE Alu -10 302 169 471 145 0 0 chr10 35027550 35027619 -105289146 - AluSx SINE Alu -244 69 1 2993 209 94 28 chr10 35027622 35029099 -105287666 + L1MA10 LINE L1 4722 6298 -36 23 0 0 0 chr10 35029574 35029597 -105287168 + AT_rich Low_complexity Low_complexity 1 23 0 419 283 134 24 chr10 35030998 35031615 -105285150 + L1ME LINE L1 4932 5712 -458 6676 208 41 24 chr10 35031679 35032669 -105284096 + L1MC4a LINE L1 3330 4302 -1876 1712 224 58 13 chr10 35032669 35033116 -105283649 + MLT1C LTR MaLR 1 467 0 6676 208 41 24 chr10 35033116 35033307 -105283458 + L1MC4a LINE L1 4302 4488 -1690 1716 162 17 26 chr10 35033307 35033609 -105283156 - AluJo SINE Alu -13 299 1 6676 208 41 24 chr10 35033609 35034024 -105282741 + L1MC4a LINE L1 4488 4894 -1284 2357 70 13 0 chr10 35034024 35034322 -105282443 - AluY SINE Alu -9 302 1 6676 208 41 24 chr10 35034322 35034770 -105281995 + L1MC4a LINE L1 4894 5333 -845 2266 110 0 0 chr10 35034770 35035071 -105281694 - AluSx SINE Alu -11 301 1 6676 208 41 24 chr10 35035071 35035466 -105281299 + L1MC4a LINE L1 5333 5815 -363 323 283 7 3 chr10 35035541 35035691 -105281074 + MER58A DNA MER1_type 6 203 -21 368 272 59 15 chr10 35035700 35035836 -105280929 + L1MC4a LINE L1 5792 5933 -1875 1896 26 0 13 chr10 35036033 35036265 -105280500 + L1PA4 LINE L1 5924 6152 -3 17751 165 42 11 chr10 35038069 35041747 -105275018 - L1MA2 LINE L1 0 7723 4160 2088 123 0 10 chr10 35041747 35042047 -105274718 + AluSx SINE Alu 1 297 -15 17751 165 42 11 chr10 35042047 35043584 -105273181 - L1MA2 LINE L1 -3563 4160 2672 1179 64 6 0 chr10 35043584 35043741 -105273024 + L1PA6 LINE L1 5997 6154 0 17751 165 42 11 chr10 35043741 35045979 -105270786 - L1MA2 LINE L1 -5051 2672 25 254 250 69 9 chr10 35046348 35046360 -105270405 - L1MA5 LINE L1 0 6300 6289 4864 154 16 88 chr10 35046360 35046745 -105270020 - L1PB4 LINE L1 0 6156 5745 2622 73 20 6 chr10 35046745 35047103 -105269662 - L1PB1 LINE L1 0 6151 5789 228 241 0 0 chr10 35047109 35047167 -105269598 + (TATATG)n Simple_repeat Simple_repeat 4 61 0 4864 154 16 88 chr10 35047167 35047487 -105269278 - L1PB4 LINE L1 -416 5740 5398 228 35 0 0 chr10 35047487 35047516 -105269249 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2023 127 3 3 chr10 35047519 35047803 -105268962 - AluSg SINE Alu -26 284 1 4864 154 16 88 chr10 35047803 35049280 -105267485 - L1PB4 LINE L1 -760 5396 4115 1584 31 0 0 chr10 35049279 35049472 -105267293 + L1P LINE L1 2687 2879 -3267 * 6205 210 36 18 chr10 35049572 35049915 -105266850 - L1M4 LINE L1 -2021 4307 3972 1724 200 0 3 chr10 35049915 35050210 -105266555 - AluJb SINE Alu -18 294 1 6205 210 36 18 chr10 35050210 35052033 -105264732 - L1M4 LINE L1 -2356 3972 2183 297 0 0 0 chr10 35052033 35052066 -105264699 + (CA)n Simple_repeat Simple_repeat 2 34 0 6205 210 36 18 chr10 35052066 35054001 -105262764 - L1M4 LINE L1 -4145 2183 75 3325 166 79 56 chr10 35054121 35054855 -105261910 - MER4E LTR ERV1 -26 753 3 785 288 43 43 chr10 35054918 35055293 -105261472 + LTR38 LTR ERV1 129 503 -53 15798 185 54 19 chr10 35055300 35059888 -105256877 - L1PA15 LINE L1 -11 6154 1407 24490 55 9 2 chr10 35060229 35063907 -105252858 - L1PA5 LINE L1 -280 5874 2174 37130 78 17 3 chr10 35064023 35069095 -105247670 - L1P LINE L1 -1000 5146 2 2463 233 70 28 chr10 35069099 35070129 -105246636 - L1P LINE L1 -1103 5279 4293 835 167 13 13 chr10 35070129 35070285 -105246480 - L1PB3 LINE L1 -2 6152 5997 2463 233 70 28 chr10 35070285 35071055 -105245710 - L1P LINE L1 -2089 4293 2132 1647 223 52 9 chr10 35071055 35071578 -105245187 - L1M4c LINE L1 -4252 2394 1753 1738 143 8 0 chr10 35071586 35071838 -105244927 - AluSx SINE Alu -58 254 1 372 242 38 32 chr10 35071846 35072003 -105244762 - L1M4c LINE L1 -6380 162 5 6150 63 7 75 chr10 35072003 35072890 -105243875 + LTR12 LTR ERV1 1 826 0 317 202 58 39 chr10 35072890 35072994 -105243771 - L1M4c LINE L1 -6435 107 2 25 0 0 0 chr10 35073050 35073075 -105243690 + AT_rich Low_complexity Low_complexity 1 25 0 577 241 133 0 chr10 35073097 35073255 -105243510 + MIR SINE MIR 53 231 -31 13036 189 38 14 chr10 35073295 35075409 -105241356 - L1MA4A LINE L1 -12 6291 4229 1952 185 83 5 chr10 35075409 35075804 -105240961 + MSTB LTR MaLR 1 426 0 9146 154 45 4 chr10 35075804 35076308 -105240457 + MSTB-int LTR MaLR 1 483 -1168 198 0 0 0 chr10 35076308 35076330 -105240435 + (GAAAA)n Simple_repeat Simple_repeat 5 26 0 9146 154 45 4 chr10 35076330 35077411 -105239354 + MSTB-int LTR MaLR 483 1651 0 2197 176 60 2 chr10 35077411 35077814 -105238951 + MSTB LTR MaLR 1 426 0 13036 189 38 14 chr10 35077814 35079004 -105237761 - L1MA4A LINE L1 -2074 4229 2865 2015 136 3 0 chr10 35079004 35079305 -105237460 - AluSx SINE Alu -7 305 4 13036 189 38 14 chr10 35079305 35080065 -105236700 - L1MA4A LINE L1 -3438 2865 2125 1913 120 25 0 chr10 35080067 35080350 -105236415 + MSTA LTR MaLR 1 290 -138 596 276 0 0 chr10 35080343 35080470 -105236295 - Tigger7 DNA MER2_type -275 275 149 * 297 109 0 0 chr10 35080478 35080524 -105236241 + (TG)n Simple_repeat Simple_repeat 1 46 0 2498 69 0 0 chr10 35080567 35080871 -105235894 - AluY SINE Alu -7 304 1 22235 89 11 15 chr10 35080896 35085003 -105231762 - L1PA7 LINE L1 -7 6147 2059 581 177 146 0 chr10 35085008 35085138 -105231627 - L1PB4 LINE L1 -28 6128 5980 325 315 110 7 chr10 35085144 35085290 -105231475 + L1M4 LINE L1 1296 1456 -5753 6390 222 101 35 chr10 35085292 35089572 -105227193 - L1PB4 LINE L1 -180 6679 1979 271 274 44 22 chr10 35089721 35089856 -105226909 + L1M4 LINE L1 5274 5411 -1797 22 0 0 0 chr10 35089937 35089959 -105226806 + AT_rich Low_complexity Low_complexity 1 22 0 259 233 68 0 chr10 35090073 35090146 -105226619 + L1M4 LINE L1 5817 5894 -1314 1239 150 5 45 chr10 35090146 35090366 -105226399 - AluJo SINE Alu -101 211 1 2278 131 0 0 chr10 35090378 35090690 -105226075 - AluSx SINE Alu 0 312 1 403 271 25 8 chr10 35091506 35091628 -105225137 - MER94 DNA DNA -10 124 1 2505 140 30 137 chr10 35091881 35092458 -105224307 - MLT2B2 LTR ERVL 0 515 1 1024 209 43 0 chr10 35093044 35093254 -105223511 - MER20 DNA MER1_type 0 219 1 316 235 3 26 chr10 35093342 35093437 -105223328 + L1M4 LINE L1 3781 3874 -2272 802 271 77 77 chr10 35094012 35094098 -105222667 + L2 LINE L2 2359 2444 -870 2193 182 32 7 chr10 35094098 35094510 -105222255 - MSTB LTR MaLR -4 422 1 802 271 77 77 chr10 35094510 35094811 -105221954 + L2 LINE L2 2443 2746 -568 273 273 50 10 chr10 35095024 35095123 -105221642 - MLT1J LTR MaLR -73 438 336 1815 217 57 57 chr10 35095224 35095841 -105220924 - L1 LINE L1 -746 5400 4784 22 0 0 0 chr10 35095841 35095863 -105220902 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr10 35095892 35095922 -105220843 + AT_rich Low_complexity Low_complexity 1 30 0 11114 187 45 12 chr10 35095922 35099803 -105216962 - L1MA7 LINE L1 0 6877 2894 836 299 26 15 chr10 35099800 35100071 -105216694 - L1MA7 LINE L1 -5465 1188 915 * 226 344 11 11 chr10 35100284 35100374 -105216391 - L1MA7 LINE L1 -6283 370 281 738 292 164 31 chr10 35100389 35100742 -105216023 - L1M3de LINE L1 -5634 1019 620 265 200 40 0 chr10 35100748 35100823 -105215942 + L1MC4 LINE L1 6624 6701 -1341 682 287 58 0 chr10 35100982 35101205 -105215560 + L1 LINE L1 2478 2713 -3433 539 251 271 40 chr10 35101291 35101594 -105215171 + MLT1G LTR MaLR 14 386 -204 3195 230 96 39 chr10 35101594 35102818 -105213947 - L1MEc LINE L1 -962 5253 3960 1604 240 33 52 chr10 35102885 35103526 -105213239 - L1MEc LINE L1 -2991 3224 2596 357 197 0 0 chr10 35103539 35103605 -105213160 - MER76 LTR ERV -622 66 1 246 105 0 0 chr10 35103672 35103710 -105213055 + (CA)n Simple_repeat Simple_repeat 1 38 0 571 292 21 21 chr10 35103733 35103973 -105212792 - L1MC4a LINE L1 -1192 6616 6377 414 185 0 0 chr10 35104139 35104220 -105212545 + (TG)n Simple_repeat Simple_repeat 2 82 0 440 277 116 63 chr10 35104225 35104528 -105212237 - L1MC4a LINE L1 -1637 6171 5853 2301 104 0 0 chr10 35104865 35105162 -105211603 - AluSg SINE Alu -13 297 1 23 54 0 0 chr10 35105638 35105675 -105211090 + AT_rich Low_complexity Low_complexity 1 37 0 290 312 26 11 chr10 35105757 35105946 -105210819 - L1MEc LINE L1 -3572 2643 2452 520 191 0 0 chr10 35105991 35106080 -105210685 + FLAM_C SINE Alu 22 110 -33 203 0 68 45 chr10 35106091 35106135 -105210630 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 239 272 75 43 chr10 35106140 35106394 -105210371 - L1MEc LINE L1 -3937 2459 2198 41320 48 6 27 chr10 35106696 35110097 -105206668 - L1PA4 LINE L1 0 6155 2942 2132 77 42 7 chr10 35110097 35110384 -105206381 - AluY SINE Alu -14 297 1 41320 48 6 27 chr10 35110384 35113262 -105203503 - L1PA4 LINE L1 -3213 2942 7 27 0 0 0 chr10 35113393 35113420 -105203345 + AT_rich Low_complexity Low_complexity 1 27 0 552 293 53 33 chr10 35113548 35113999 -105202766 - L1M4 LINE L1 -3570 2576 2117 33 73 0 0 chr10 35114293 35114361 -105202404 + AT_rich Low_complexity Low_complexity 1 68 0 2308 179 30 18 chr10 35114522 35115006 -105201759 - L1MA6 LINE L1 0 6300 5808 1822 163 25 31 chr10 35115006 35115363 -105201402 + THE1A LTR MaLR 1 355 0 2308 179 30 18 chr10 35115363 35115381 -105201384 - L1MA6 LINE L1 -492 5808 5792 641 89 0 11 chr10 35115381 35115471 -105201294 + MSTA LTR MaLR 340 428 0 1519 150 11 4 chr10 35115471 35115744 -105201021 + L1M1 LINE L1 5308 5582 -721 * 5280 198 22 18 chr10 35115735 35117031 -105199734 - L1 LINE L1 -2250 3896 2596 5137 137 12 0 chr10 35117034 35117682 -105199083 - L1PA16 LINE L1 -1 6165 5526 1860 155 0 10 chr10 35117682 35117978 -105198787 + AluSx SINE Alu 1 293 -19 5137 137 12 0 chr10 35117978 35118957 -105197808 - L1PA16 LINE L1 -640 5526 4537 2908 93 7 14 chr10 35118958 35119377 -105197388 - L1PA11 LINE L1 -457 5717 5302 3116 116 17 4 chr10 35119377 35119847 -105196918 + L1PA11 LINE L1 5694 6174 0 3150 247 26 13 chr10 35119847 35120910 -105195855 - L1PA12 LINE L1 -4313 3271 2182 243 368 11 0 chr10 35121157 35121252 -105195513 - L1PA12 LINE L1 -5401 2180 2085 779 346 48 46 chr10 35121375 35121984 -105194781 - L1PA12 LINE L1 -6177 1397 788 3323 98 8 0 chr10 35121989 35122471 -105194294 - LTR19A LTR ERV1 0 486 1 2878 219 46 11 chr10 35122479 35123658 -105193107 - L1 LINE L1 -3537 4028 2804 1167 242 89 58 chr10 35123672 35124134 -105192631 - L1 LINE L1 -7069 496 21 4858 238 44 33 chr10 35124289 35125783 -105190982 - L1M4 LINE L1 -4839 2624 1114 1579 178 45 32 chr10 35125819 35126033 -105190732 - L1M2 LINE L1 -718 5573 5363 1846 142 0 62 chr10 35126033 35126357 -105190408 - AluSx SINE Alu -8 304 1 1579 178 45 32 chr10 35126357 35126676 -105190089 - L1M2 LINE L1 -928 5363 5024 1806 148 21 33 chr10 35126685 35126856 -105189909 + L1MA9 LINE L1 5579 5751 -561 2432 109 25 0 chr10 35126856 35127222 -105189543 - THE1C LTR MaLR 0 375 1 10278 109 43 8 chr10 35127222 35128749 -105188016 - THE1C-int LTR MaLR 0 1580 1 2351 145 11 3 chr10 35128749 35129121 -105187644 - THE1C LTR MaLR 0 375 1 1806 148 21 33 chr10 35129121 35129284 -105187481 + L1MA9 LINE L1 5748 5911 -401 * 2498 196 53 16 chr10 35129282 35129965 -105186800 - L1M2 LINE L1 -2714 3432 2725 699 148 26 0 chr10 35129970 35130085 -105186680 - Tigger1 DNA MER2_type -1 2417 2300 2785 111 13 29 chr10 35130089 35130541 -105186224 + L1P4 LINE L1 5254 5698 -465 420 200 12 0 chr10 35130541 35130626 -105186139 - L1M4 LINE L1 -6419 1146 1061 4970 12 0 0 chr10 35130636 35131200 -105185565 - L1PA3 LINE L1 -1 6154 5591 4537 16 9 0 chr10 35131200 35131933 -105184832 + L1PA3 LINE L1 4856 5592 -563 * 5895 183 39 5 chr10 35131927 35132952 -105183813 - L1M4 LINE L1 -6487 1078 19 308 263 64 104 chr10 35133908 35134265 -105182500 - L1MC4a LINE L1 -1786 6022 5680 25 31 0 0 chr10 35134287 35134319 -105182446 + AT_rich Low_complexity Low_complexity 1 32 0 4534 221 68 77 chr10 35134713 35136887 -105179878 - L1MA8 LINE L1 -1 6290 4190 13747 40 5 5 chr10 35136887 35139343 -105177422 - L1PA5 LINE L1 0 6154 3699 4534 221 68 77 chr10 35139343 35140315 -105176450 - L1MA8 LINE L1 -2101 4190 3211 2985 9 0 0 chr10 35140905 35141240 -105175525 - L1PA3 LINE L1 -4 6151 5817 541 205 22 89 chr10 35141240 35141464 -105175301 - L1M4 LINE L1 -2935 4232 4024 2900 158 74 2 chr10 35141465 35142016 -105174749 + Tigger3(Golem) DNA MER2_type 2433 3023 -6 828 314 32 16 chr10 35142024 35142616 -105174149 - L1M4 LINE L1 -4945 2153 1534 2388 199 101 27 chr10 35143455 35144158 -105172607 - L1 LINE L1 -1140 5070 4309 345 47 0 0 chr10 35144158 35144201 -105172564 + (TG)n Simple_repeat Simple_repeat 2 44 0 2388 199 101 27 chr10 35144201 35144230 -105172535 - L1 LINE L1 -1901 4309 4284 3083 258 62 56 chr10 35144283 35145292 -105171473 - L1 LINE L1 -2657 3553 2551 260 32 0 0 chr10 35145292 35145323 -105171442 - AluY SINE Alu -15 287 257 3083 258 62 56 chr10 35145323 35146190 -105170575 - L1 LINE L1 -3659 2551 1690 7895 32 6 0 chr10 35146190 35147905 -105168860 + L1PA3 LINE L1 4434 6155 0 3083 258 62 56 chr10 35147905 35149509 -105167256 - L1 LINE L1 -4520 1690 1 300 264 40 65 chr10 35149690 35149862 -105166903 - HERVL LTR ERVL -2769 2761 902 1346 71 82 11 chr10 35150955 35151139 -105165626 - L1PA6 LINE L1 0 6154 5958 265 289 14 63 chr10 35151780 35151922 -105164843 - MER76 LTR ERV -274 414 280 613 300 48 48 chr10 35151999 35152249 -105164516 - MER76 LTR ERV -438 250 1 282 308 46 21 chr10 35152252 35152265 -105164500 - L1MC4a LINE L1 -1233 6575 6564 441 0 0 0 chr10 35152265 35152314 -105164451 + (CA)n Simple_repeat Simple_repeat 2 50 0 282 308 46 21 chr10 35152314 35152530 -105164235 - L1MC4a LINE L1 -1244 6564 6450 5644 125 22 0 chr10 35152547 35154220 -105162545 - L1PA15 LINE L1 -7 6158 4438 1312 276 33 102 chr10 35154230 35155236 -105161529 - L1PA12 LINE L1 -5831 1750 7 676 222 95 128 chr10 35155426 35155879 -105160886 - L1MC4a LINE L1 -1578 6230 5799 1695 55 0 15 chr10 35155879 35156078 -105160687 - MER107 DNA MER1_type 0 197 2 676 222 95 128 chr10 35156078 35156201 -105160564 - L1MC4a LINE L1 -2009 5799 5673 295 293 20 0 chr10 35156799 35156919 -105159846 - HERVL LTR ERVL -2364 3400 948 369 260 19 10 chr10 35157475 35157579 -105159186 - HERVL LTR ERVL -3035 2619 2515 651 200 78 106 chr10 35158926 35159286 -105157479 - L1MC4a LINE L1 -1786 6022 5673 2175 123 0 0 chr10 35160269 35160561 -105156204 - AluSx SINE Alu -20 292 1 597 242 20 90 chr10 35163201 35163445 -105153320 - MER76 LTR ERV -54 634 408 418 218 108 137 chr10 35163715 35164126 -105152639 - L1MC4a LINE L1 -1624 6184 5790 5218 149 22 38 chr10 35164126 35165005 -105151760 + MER6 DNA MER2_type 1 865 0 418 218 108 137 chr10 35165005 35165120 -105151645 - L1MC4a LINE L1 -2018 5790 5673 311 313 18 0 chr10 35166227 35166339 -105150426 - HERVL LTR ERVL -3019 2635 2522 1917 114 34 17 chr10 35167437 35167735 -105149030 - MER1A DNA MER1_type 0 529 227 11992 122 11 19 chr10 35167737 35169585 -105147180 + L1PA5 LINE L1 11 1842 -4304 * 42572 56 8 1 chr10 35169580 35175683 -105141082 - L1PA4 LINE L1 -1 6154 5 27846 64 1 0 chr10 35175681 35180006 -105136759 + L1PA5 LINE L1 1825 6152 -2 * 1540 171 4 0 chr10 35180034 35180268 -105136497 - MER1A DNA MER1_type -290 237 3 715 268 24 24 chr10 35181337 35181542 -105135223 - MER76 LTR ERV -33 655 451 232 152 0 0 chr10 35181647 35181693 -105135072 + LTR66 LTR ERVL 394 439 -171 419 254 17 8 chr10 35181734 35181852 -105134913 - L1MC/D LINE L1 -2017 5791 5673 14086 136 20 114 chr10 35184632 35187807 -105128958 + L1P LINE L1 9 2887 -3259 7535 110 5 7 chr10 35187907 35188949 -105127816 - HERVL-A2 LTR ERVL -4614 1040 1 2181 161 51 33 chr10 35188949 35189480 -105127285 - MLT2A2 LTR ERVL 0 554 1 2061 225 41 69 chr10 35189484 35189581 -105127184 - L1 LINE L1 -3354 2792 2694 242 83 83 0 chr10 35189581 35189617 -105127148 - U2 snRNA snRNA -149 39 1 2061 225 41 69 chr10 35189617 35190241 -105126524 - L1 LINE L1 -3452 2694 2054 230 35 0 0 chr10 35190300 35190329 -105126436 + MSTB LTR MaLR 1 29 -397 282 116 0 0 chr10 35190340 35190383 -105126382 + L1MB8 LINE L1 6105 6147 -31 220 349 0 0 chr10 35191167 35191230 -105125535 + MIR SINE MIR 63 125 -83 198 0 0 0 chr10 35191347 35191369 -105125396 + (CA)n Simple_repeat Simple_repeat 2 23 0 2425 226 12 23 chr10 35192060 35192217 -105124548 + L1M4b LINE L1 1083 1240 -5615 1884 172 159 8 chr10 35192217 35192589 -105124176 - MSTA LTR MaLR 0 428 1 2425 226 12 23 chr10 35192589 35193088 -105123677 + L1M4b LINE L1 1240 1729 -5126 1321 271 73 28 chr10 35193091 35193597 -105123168 + L1M4b LINE L1 1838 2366 -4593 4768 188 108 85 chr10 35193825 35194228 -105122537 + L1P2 LINE L1 1 393 -6463 993 132 0 0 chr10 35194228 35194364 -105122401 - AluSp SINE Alu -94 219 84 4768 188 108 85 chr10 35194364 35195315 -105121450 + L1P2 LINE L1 393 1321 -5535 596 213 8 25 chr10 35195315 35195437 -105121328 + FLAM_C SINE Alu 6 125 -18 4768 188 108 85 chr10 35195437 35197766 -105118999 + L1P2 LINE L1 1321 6500 -356 19454 78 3 7 chr10 35197914 35201624 -105115141 + HERVL LTR ERVL 1127 4826 -828 23 0 0 0 chr10 35201624 35201647 -105115118 + AT_rich Low_complexity Low_complexity 1 23 0 2359 114 17 3 chr10 35201652 35202012 -105114753 - L1PB1 LINE L1 -2 6149 5785 189 147 0 0 chr10 35202012 35202046 -105114719 + (TA)n Simple_repeat Simple_repeat 1 34 0 287 103 0 35 chr10 35202078 35202136 -105114629 + L1MC4 LINE L1 6648 6703 -1339 231 216 0 0 chr10 35202108 35202159 -105114606 - L1MC4 LINE L1 -1339 6703 6653 * 873 78 39 8 chr10 35202156 35202284 -105114481 - L1P5 LINE L1 -361 5790 5659 22 0 0 0 chr10 35202396 35202418 -105114347 + AT_rich Low_complexity Low_complexity 1 22 0 308 340 90 19 chr10 35202756 35202912 -105113853 + MLT2E LTR ERVL 37 203 -425 934 188 6 11 chr10 35202992 35203168 -105113597 + L1M3f LINE L1 5 179 -5149 4047 168 62 62 chr10 35203169 35204262 -105112503 + L1M3f LINE L1 339 1428 -4065 404 296 0 10 chr10 35204290 35204388 -105112377 + L1PA13 LINE L1 127 223 -6564 4418 142 82 20 chr10 35204477 35205364 -105111401 + L1PA16 LINE L1 5234 6166 0 1316 251 37 7 chr10 35205342 35205749 -105111016 + L1M3f LINE L1 2759 3177 -3151 * 4173 254 62 20 chr10 35206436 35206705 -105110060 - L1M1 LINE L1 -3936 3231 2975 2129 113 3 0 chr10 35206705 35206987 -105109778 - AluSx SINE Alu -29 283 1 4173 254 62 20 chr10 35206987 35209027 -105107738 - L1M1 LINE L1 -4192 2975 1133 2561 265 34 17 chr10 35209034 35209682 -105107083 + MLT-int LTR MaLR 841 1499 -236 959 206 48 31 chr10 35209682 35209910 -105106855 - MSTD LTR MaLR -164 232 1 4275 250 47 91 chr10 35209910 35212405 -105104360 - L1M3c LINE L1 -4660 2377 1 2044 214 77 53 chr10 35212417 35212927 -105103838 - L1M4c LINE L1 -4831 1711 1182 2043 148 7 3 chr10 35212927 35213232 -105103533 - AluSx SINE Alu -6 306 1 2044 214 77 53 chr10 35213232 35213595 -105103170 - L1M4c LINE L1 -5360 1182 829 895 160 75 0 chr10 35213750 35213938 -105102827 + L1PA13 LINE L1 1978 2179 -4608 230 291 163 26 chr10 35214115 35214538 -105102227 - L1M4 LINE L1 -3026 3120 2640 277 125 0 36 chr10 35214686 35214742 -105102023 - Alu SINE Alu 0 302 249 225 36 0 0 chr10 35214880 35214908 -105101857 + Alu SINE Alu 262 289 -12 2454 95 3 0 chr10 35214919 35215282 -105101483 + L1PA10 LINE L1 5812 6175 0 6955 222 34 31 chr10 35215321 35216962 -105099803 - L1MB4 LINE L1 -1 6677 5030 2182 123 10 0 chr10 35216962 35217271 -105099494 + AluSx SINE Alu 1 312 0 6955 222 34 31 chr10 35217271 35218593 -105098172 - L1MB4 LINE L1 -1648 5030 3713 2118 206 171 18 chr10 35218589 35219241 -105097524 - L1MB4 LINE L1 -3897 2749 1986 * 1919 120 14 3 chr10 35219241 35219532 -105097233 - AluSc SINE Alu -15 294 1 2118 206 171 18 chr10 35219532 35219564 -105097201 - L1MB4 LINE L1 -4660 1986 1960 252 367 0 7 chr10 35219666 35219813 -105096952 - L1MB4 LINE L1 -6383 159 14 4788 140 41 26 chr10 35220567 35221622 -105095143 + L1PA16 LINE L1 4408 5503 -663 2221 96 0 24 chr10 35221622 35221915 -105094850 - AluSx SINE Alu -26 286 1 4788 140 41 26 chr10 35221915 35222590 -105094175 + L1PA16 LINE L1 5503 6166 0 500 339 32 5 chr10 35222785 35223003 -105093762 - MIR SINE MIR -27 235 12 4277 16 0 0 chr10 35223198 35223687 -105093078 - L1PA2 LINE L1 -3 6152 5664 655 317 46 58 chr10 35224784 35225266 -105091499 + L1M3b LINE L1 1 476 -5805 21 36 0 0 chr10 35225434 35225462 -105091303 + AT_rich Low_complexity Low_complexity 1 28 0 1790 245 62 19 chr10 35225668 35226495 -105090270 + L1M3b LINE L1 1094 1943 -4408 3120 290 44 43 chr10 35226495 35227928 -105088837 + L1PBa LINE L1 67 1500 -5363 * 9466 213 43 18 chr10 35227926 35229401 -105087364 + L1PBa LINE L1 2427 3957 -2905 4908 51 2 0 chr10 35229401 35230008 -105086757 + L1PA7 LINE L1 5546 6153 -1 9466 213 43 18 chr10 35230008 35231291 -105085474 + L1PBa LINE L1 3957 5206 -1656 2239 172 59 13 chr10 35231387 35231864 -105084901 - L1M1 LINE L1 -5082 2483 1985 625 152 8 40 chr10 35231859 35231984 -105084781 - L1M1 LINE L1 -7429 136 16 * 916 207 10 35 chr10 35232256 35232459 -105084306 + MSTB LTR MaLR 1 198 -228 928 185 23 12 chr10 35232464 35232637 -105084128 + L1M1 LINE L1 22 196 -7369 13938 204 42 8 chr10 35232637 35235396 -105081369 - ERVL LTR ERVL -2150 3614 763 4551 198 45 25 chr10 35235411 35237098 -105079667 - L1MA7 LINE L1 -25 6852 5134 824 273 92 32 chr10 35237109 35237394 -105079371 - L1MA7 LINE L1 -5254 1399 583 337 304 70 23 chr10 35237441 35237612 -105079153 - L1M3d LINE L1 -5712 179 1 1877 258 20 30 chr10 35237625 35238122 -105078643 - ERVL LTR ERVL -5076 688 197 40097 68 8 2 chr10 35238922 35245032 -105071733 - L1PA4 LINE L1 -3 6152 1 228 271 86 7 chr10 35245243 35245383 -105071382 - L1M4 LINE L1 -1607 4539 4389 334 287 127 53 chr10 35246101 35246251 -105070514 + MIR SINE MIR 26 186 -76 21 71 0 0 chr10 35246943 35246985 -105069780 + AT_rich Low_complexity Low_complexity 1 42 0 1829 355 72 27 chr10 35247124 35248662 -105068103 + ERVL LTR ERVL 3725 5379 -385 1155 308 65 22 chr10 35248915 35249408 -105067357 + LTR33 LTR ERVL 8 521 0 21 71 0 0 chr10 35249536 35249578 -105067187 + AT_rich Low_complexity Low_complexity 1 42 0 435 139 0 25 chr10 35249599 35249678 -105067087 - MER116 DNA Mariner 0 80 4 4341 203 48 9 chr10 35250372 35251258 -105065507 + L1MC1 LINE L1 5 925 -5501 233 200 0 0 chr10 35251259 35251299 -105065466 + L1MC1 LINE L1 4564 4603 -1823 5793 102 24 6 chr10 35251309 35252525 -105064240 - L1PA15 LINE L1 -4 6161 4926 547 223 52 74 chr10 35252531 35252760 -105064005 - L1PA13 LINE L1 -5334 1453 1230 2803 286 52 19 chr10 35252770 35253619 -105063146 - L1PA13 LINE L1 -5910 877 1 1192 261 37 0 chr10 35253630 35253982 -105062783 + L1MC1 LINE L1 4595 4959 -1467 2073 208 39 2 chr10 35253990 35254399 -105062366 + MSTB1 LTR MaLR 9 432 0 2588 202 22 9 chr10 35254444 35255290 -105061475 + L1MC1 LINE L1 5018 5872 -745 4941 35 2 3 chr10 35255524 35256117 -105060648 - L1PA5 LINE L1 0 6154 5563 2552 46 0 0 chr10 35256117 35256444 -105060321 + L1P LINE L1 4999 5325 -821 1539 168 16 19 chr10 35256441 35256751 -105060014 + L1MC1 LINE L1 5861 6169 -444 * 994 212 151 55 chr10 35256751 35257076 -105059689 + MLT1A1 LTR MaLR 9 364 -1 2283 146 28 21 chr10 35257077 35257509 -105059256 + L1MC1 LINE L1 6179 6613 0 823 270 103 20 chr10 35257515 35257986 -105058779 + L1MEc LINE L1 2200 2700 -3515 1291 178 12 45 chr10 35258024 35258271 -105058494 - MER8 DNA MER2_type 0 239 1 1288 182 12 45 chr10 35259058 35259305 -105057460 + MER8 DNA MER2_type 1 239 0 492 248 25 31 chr10 35259358 35259519 -105057246 + L1MCa LINE L1 455 614 -5812 3713 252 67 50 chr10 35259525 35260904 -105055861 + L1MC/D LINE L1 500 1855 -4709 1710 196 7 0 chr10 35260904 35261200 -105055565 + AluJb SINE Alu 3 300 -12 3713 252 67 50 chr10 35261200 35262488 -105054277 + L1MC/D LINE L1 1855 3232 -3332 * 4733 204 86 44 chr10 35262487 35263231 -105053534 + L1MC/D LINE L1 4065 4776 -1986 1833 31 0 9 chr10 35263231 35263457 -105053308 + L1PA3 LINE L1 5929 6152 -3 4733 204 86 44 chr10 35263457 35264666 -105052099 + L1MC/D LINE L1 4776 6100 -662 289 250 60 12 chr10 35264686 35264770 -105051995 + MER119 DNA MER1_type 455 542 -41 228 305 62 45 chr10 35264812 35264895 -105051870 + L1MCa LINE L1 2577 2657 -3769 1979 123 0 10 chr10 35264895 35265235 -105051530 - AluSx SINE Alu 0 337 1 5259 87 7 17 chr10 35265241 35265992 -105050773 - L1PA14 LINE L1 0 6161 5419 228 305 62 45 chr10 35265992 35266256 -105050509 + L1MCa LINE L1 2661 2939 -3487 278 279 79 38 chr10 35266767 35267032 -105049733 + L1MEc LINE L1 2183 2458 -3938 443 171 94 21 chr10 35267055 35267182 -105049583 + L1MC1 LINE L1 6209 6333 0 361 280 52 10 chr10 35267189 35267382 -105049383 + L1MEc LINE L1 2468 2668 -3547 815 120 16 0 chr10 35267779 35267904 -105048861 - AluSg/x SINE Alu -12 300 174 995 104 0 0 chr10 35268004 35268139 -105048626 - AluY SINE Alu -176 135 1 566 271 162 29 chr10 35268488 35268939 -105047826 + L1M4 LINE L1 2117 2627 -3519 36 40 0 0 chr10 35269002 35269052 -105047713 + AT_rich Low_complexity Low_complexity 1 50 0 30 103 0 0 chr10 35269326 35269433 -105047332 + AT_rich Low_complexity Low_complexity 1 107 0 1623 138 15 0 chr10 35269656 35269917 -105046848 + L1PA11 LINE L1 5899 6163 -11 350 284 44 64 chr10 35269920 35270328 -105046437 + L1MEc LINE L1 2270 2669 -3546 25 51 0 0 chr10 35270409 35270448 -105046317 + AT_rich Low_complexity Low_complexity 1 39 0 255 243 27 0 chr10 35271444 35271518 -105045247 + L1MEc LINE L1 3450 3525 -2690 * 749 170 7 20 chr10 35271508 35271661 -105045104 + L1MA4A LINE L1 6019 6169 -134 * 2340 203 33 2 chr10 35271654 35272172 -105044593 + L1MEc LINE L1 3586 4119 -2096 634 160 28 35 chr10 35272146 35272290 -105044475 + L1MA4A LINE L1 6230 6372 0 * 303 338 42 63 chr10 35272290 35272577 -105044188 + L1MEc LINE L1 1741 2021 -4375 267 31 0 0 chr10 35273138 35273170 -105043595 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2306 100 0 6 chr10 35273995 35274306 -105042459 - AluSc SINE Alu 0 309 1 1910 213 32 74 chr10 35274898 35275572 -105041193 + L1M4b LINE L1 1083 1727 -5128 741 258 45 42 chr10 35275577 35275910 -105040855 + L1M4b LINE L1 1838 2171 -4788 25229 61 11 1 chr10 35275912 35279166 -105037599 + L1P LINE L1 4 3291 -2855 22 0 0 0 chr10 35280053 35280075 -105036690 + AT_rich Low_complexity Low_complexity 1 22 0 309 295 38 9 chr10 35280517 35280622 -105036143 + L1MC4a LINE L1 5682 5789 -2019 556 291 51 54 chr10 35280682 35281016 -105035749 + L1MC4a LINE L1 5816 6150 -1658 2160 170 70 2 chr10 35281016 35281415 -105035350 + MSTB LTR MaLR 1 426 0 556 291 51 54 chr10 35281415 35281472 -105035293 + L1MC4a LINE L1 6150 6206 -1602 301 341 71 9 chr10 35281580 35281903 -105034862 + L1MC4 LINE L1 6360 6702 -1340 1717 283 62 28 chr10 35281920 35282563 -105034202 + MER76 LTR ERV 1 665 -23 2153 166 91 2 chr10 35284138 35284554 -105032211 + MLT1C LTR MaLR 2 454 -13 1270 169 5 5 chr10 35384779 35384998 -104931767 + AluJo SINE Alu 93 311 -1 304 344 16 60 chr10 35386205 35386455 -104930310 - L1ME LINE L1 -529 5637 5399 2504 68 0 0 chr10 35386677 35386986 -104929779 + AluSc SINE Alu 1 309 0 934 254 150 48 chr10 35387012 35387585 -104929180 - LTR50 LTR ERVL -91 704 1 276 291 0 0 chr10 35387843 35387929 -104928836 - MLT-int LTR MaLR -21 1714 1629 405 0 0 0 chr10 35388029 35388074 -104928691 + (CA)n Simple_repeat Simple_repeat 2 46 0 1798 238 92 21 chr10 35388332 35388992 -104927773 - L1 LINE L1 -2994 3152 2446 757 110 76 0 chr10 35389738 35389856 -104926909 - AluSg/x SINE Alu -13 299 173 21 0 0 0 chr10 35390609 35390630 -104926135 + AT_rich Low_complexity Low_complexity 1 21 0 1560 165 29 0 chr10 35391138 35391417 -104925348 - L1PA16 LINE L1 -6 6160 5874 517 292 39 35 chr10 35391988 35392248 -104924517 - L1MC4a LINE L1 -1972 5836 5576 456 167 0 108 chr10 35392331 35392451 -104924314 + L1M4 LINE L1 4521 4627 -1519 3757 103 2 0 chr10 35392494 35392988 -104923777 - MER1A DNA MER1_type 0 529 35 2513 225 42 3 chr10 35393010 35393655 -104923110 + L1M4 LINE L1 4663 5332 -814 2339 269 59 8 chr10 35393655 35394396 -104922369 + L1M3 LINE L1 934 1712 -5456 299 275 28 18 chr10 35394399 35394508 -104922257 + L1M3 LINE L1 1823 1932 -5236 7832 205 37 42 chr10 35394548 35395969 -104920796 + L1M3 LINE L1 3673 5082 -2085 22014 83 15 0 chr10 35395969 35399825 -104916940 + L1PA7 LINE L1 2282 6154 0 7832 205 37 42 chr10 35399825 35400591 -104916174 + L1M3 LINE L1 5082 5850 -1317 1221 221 0 0 chr10 35400612 35400834 -104915931 - AluJo SINE Alu -17 295 74 2194 182 58 66 chr10 35400853 35401141 -104915624 + L1M3 LINE L1 5868 6157 -1047 234 0 0 0 chr10 35401141 35401167 -104915598 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2194 182 58 66 chr10 35401167 35401566 -104915199 + L1M3 LINE L1 6157 6550 -654 180 152 0 0 chr10 35401737 35401770 -104914995 + (TA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 35401812 35401834 -104914931 + AT_rich Low_complexity Low_complexity 1 22 0 901 237 113 35 chr10 35402182 35402657 -104914108 + L1ME2 LINE L1 4946 5482 -682 270 0 0 0 chr10 35402657 35402687 -104914078 + (CA)n Simple_repeat Simple_repeat 2 31 0 901 237 113 35 chr10 35402687 35402809 -104913956 + L1ME2 LINE L1 5482 5593 -571 399 257 22 11 chr10 35402835 35402976 -104913789 + L1ME2 LINE L1 5999 6145 -17 1261 284 57 15 chr10 35402990 35403391 -104913374 + L1MC4a LINE L1 6348 6765 -1043 829 241 95 7 chr10 35403390 35403685 -104913080 + L1M4 LINE L1 5005 5325 -821 * 1720 241 113 28 chr10 35403779 35403859 -104912906 + L1MC4 LINE L1 6995 7067 -975 224 304 25 13 chr10 35403859 35403938 -104912827 + GA-rich Low_complexity Low_complexity 3 82 0 1720 241 113 28 chr10 35403938 35404619 -104912146 + L1MC4 LINE L1 7067 7914 -128 226 276 102 0 chr10 35404818 35404916 -104911849 + L1M LINE L1 5261 5368 -2440 25 31 0 0 chr10 35404974 35405006 -104911759 + AT_rich Low_complexity Low_complexity 1 32 0 3411 150 28 5 chr10 35405006 35405618 -104911147 - L1MB3 LINE L1 -7 6176 5551 671 207 133 7 chr10 35405619 35405769 -104910996 - L1MCa LINE L1 -6228 198 30 331 164 0 0 chr10 35405773 35405834 -104910931 - L1MB8 LINE L1 -304 5874 5814 * 33257 37 18 8 chr10 35405828 35410827 -104905938 - L1PA4 LINE L1 -1 6154 1113 1701 199 6 3 chr10 35410853 35411189 -104905576 - L1MB8 LINE L1 -399 5785 5449 192 229 0 0 chr10 35411385 35411468 -104905297 + (TA)n Simple_repeat Simple_repeat 1 83 0 32 26 0 0 chr10 35411468 35411507 -104905258 + AT_rich Low_complexity Low_complexity 1 39 0 2568 95 5 19 chr10 35411538 35411916 -104904849 - L1PB3 LINE L1 0 6154 5782 358 220 14 35 chr10 35411916 35412057 -104904708 + (CATA)n Simple_repeat Simple_repeat 3 140 0 1545 203 14 3 chr10 35412089 35412438 -104904327 - L1MB8 LINE L1 -1034 5112 4760 * 2332 148 3 0 chr10 35412424 35412810 -104903955 - L1P LINE L1 -1028 5118 4732 246 260 127 27 chr10 35412800 35412950 -104903815 - L1MC/D LINE L1 -1943 5865 5701 * 913 200 17 6 chr10 35413215 35413395 -104903370 + MER5A DNA MER1_type 7 188 -1 308 243 19 39 chr10 35414993 35415096 -104901669 + MER5B DNA MER1_type 1 101 -77 244 200 0 0 chr10 35415090 35415130 -104901635 - MER5B DNA MER1_type -135 43 4 * 740 290 5 0 chr10 35415334 35415541 -104901224 + MER3 DNA MER1_type 1 208 -1 667 82 31 0 chr10 35416311 35416408 -104900357 - L1PA10 LINE L1 -3 6165 6066 21 82 0 0 chr10 35416426 35416475 -104900290 + AT_rich Low_complexity Low_complexity 1 49 0 5872 94 26 0 chr10 35416909 35418186 -104898579 - L1PA10 LINE L1 -107 6061 4757 21 0 0 0 chr10 35418585 35418606 -104898159 + AT_rich Low_complexity Low_complexity 1 21 0 229 360 10 10 chr10 35419185 35419285 -104897480 - MIR SINE MIR -160 102 3 1881 167 147 5 chr10 35419324 35419732 -104897033 - MER31B LTR ERV1 0 466 1 24 0 0 0 chr10 35419904 35419928 -104896837 + AT_rich Low_complexity Low_complexity 1 24 0 413 311 95 26 chr10 35421220 35421410 -104895355 - L3 LINE CR1 -49 1528 1326 665 311 4 13 chr10 35421764 35421992 -104894773 + L1MC3 LINE L1 6304 6529 -1256 264 228 0 0 chr10 35421985 35422042 -104894723 + L1MD3 LINE L1 7908 7964 -31 * 709 227 47 72 chr10 35423416 35423885 -104892880 + L1M4 LINE L1 7 1472 -4831 1118 95 71 0 chr10 35423885 35424054 -104892711 + L1PA14 LINE L1 5981 6161 0 2299 101 3 3 chr10 35424063 35424369 -104892396 + AluSx SINE Alu 3 308 -4 311 357 45 28 chr10 35425809 35426095 -104890670 - L1ME1 LINE L1 0 6166 5876 701 228 170 4 chr10 35427425 35427684 -104889081 + L1M4 LINE L1 4880 5181 -1201 1460 162 0 37 chr10 35427723 35427994 -104888771 - MLT1A1 LTR MaLR 0 365 105 609 246 0 0 chr10 35427998 35428124 -104888641 - HERVL74 LTR ERVL -2060 3625 3500 4366 218 90 21 chr10 35428146 35429603 -104887162 - HERVL74 LTR ERVL -2357 3328 1608 456 19 0 0 chr10 35429603 35429656 -104887109 + (TG)n Simple_repeat Simple_repeat 2 54 0 4366 218 90 21 chr10 35429656 35430209 -104886556 - HERVL74 LTR ERVL -4077 1608 1095 26 74 0 0 chr10 35430233 35430287 -104886478 + AT_rich Low_complexity Low_complexity 1 54 0 267 243 37 28 chr10 35430456 35430563 -104886202 - MER107 DNA MER1_type -22 175 68 1617 196 83 32 chr10 35431046 35431644 -104885121 - L1ME1 LINE L1 -325 5842 5188 3383 188 66 15 chr10 35431667 35431710 -104885055 - L1MB4 LINE L1 -65 6115 6076 3341 198 26 84 chr10 35431710 35432738 -104884027 + LTR5 LTR ERVK 1 969 0 3383 188 66 15 chr10 35432738 35433929 -104882836 - L1MB4 LINE L1 -104 6076 4834 618 234 137 26 chr10 35433968 35434194 -104882571 - L2 LINE L2 -1617 1697 1447 223 227 0 106 chr10 35434210 35434276 -104882489 - L2 LINE L2 0 3313 3255 514 152 235 0 chr10 35434279 35434411 -104882354 - L1ME LINE L1 -665 5499 5337 1890 189 52 14 chr10 35434436 35434891 -104881874 + L1MB4 LINE L1 5522 6004 -161 1501 195 81 0 chr10 35435683 35435990 -104880775 + L1PB4 LINE L1 5821 6152 -4 24 0 0 0 chr10 35438005 35438029 -104878736 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 35438661 35438698 -104878067 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 35439927 35439948 -104876817 + AT_rich Low_complexity Low_complexity 1 21 0 184 314 39 0 chr10 35440044 35440095 -104876670 - L2 LINE L2 -87 3185 3133 2259 112 0 13 chr10 35440327 35440640 -104876125 + AluSx SINE Alu 4 312 0 216 111 0 0 chr10 35441258 35441294 -104875471 + (A)n Simple_repeat Simple_repeat 1 36 0 282 139 0 0 chr10 35442234 35442277 -104874488 + MER116 DNA Mariner 9 51 -29 22 35 0 0 chr10 35442283 35442312 -104874453 + AT_rich Low_complexity Low_complexity 1 29 0 721 278 120 0 chr10 35442814 35443023 -104873742 + MIR SINE MIR 3 236 -26 215 189 19 0 chr10 35443299 35443352 -104873413 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1975 141 7 0 chr10 35443566 35443870 -104872895 + AluSx SINE Alu 5 310 -2 218 270 61 108 chr10 35443966 35444114 -104872651 - MIR3 SINE MIR -52 156 16 22 35 0 0 chr10 35444508 35444537 -104872228 + AT_rich Low_complexity Low_complexity 1 29 0 996 164 145 38 chr10 35444747 35444978 -104871787 - L1ME1 LINE L1 -5 6161 5897 1366 89 38 60 chr10 35444978 35445213 -104871552 + MER30 DNA MER1_type 1 230 0 996 164 145 38 chr10 35445213 35445243 -104871522 - L1ME1 LINE L1 -269 5897 5872 2675 235 78 24 chr10 35445887 35446847 -104869918 + L1ME LINE L1 4238 5249 -897 637 168 17 13 chr10 35446854 35446986 -104869779 + L1ME LINE L1 5564 5689 -477 182 309 73 0 chr10 35447172 35447227 -104869538 - MIR SINE MIR -10 252 194 1971 142 35 0 chr10 35448011 35448293 -104868472 - AluSx SINE Alu -20 292 1 39979 69 5 10 chr10 35449428 35455610 -104861155 + L1PA5 LINE L1 5 6153 -1 24 0 0 0 chr10 35455626 35455650 -104861115 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 35456667 35456690 -104860075 + AT_rich Low_complexity Low_complexity 1 23 0 1956 143 3 34 chr10 35457945 35458266 -104858499 + AluSx SINE Alu 1 311 -1 299 289 0 87 chr10 35461263 35461367 -104855398 + L2 LINE L2 3218 3312 -1 473 271 25 0 chr10 35462104 35462226 -104854539 - MIR SINE MIR -52 210 86 879 125 0 7 chr10 35463467 35463603 -104853162 + MLT1A1 LTR MaLR 1 135 -230 2064 166 57 15 chr10 35463606 35464009 -104852756 + MSTB LTR MaLR 1 420 -6 1131 191 31 0 chr10 35464014 35464239 -104852526 + MLT1A1 LTR MaLR 133 364 -1 2154 105 14 7 chr10 35464764 35465059 -104851706 + AluSq SINE Alu 1 297 -16 218 342 174 5 chr10 35465865 35465994 -104850771 - L2 LINE L2 -510 2804 2698 204 45 23 45 chr10 35465994 35466038 -104850727 + (TTA)n Simple_repeat Simple_repeat 3 45 0 218 342 174 5 chr10 35466038 35466092 -104850673 - L2 LINE L2 -616 2698 2590 202 290 161 47 chr10 35466201 35466394 -104850371 - L2 LINE L2 -1007 2307 2093 520 169 260 24 chr10 35469407 35469653 -104847112 - MER33 DNA MER1_type -32 292 1 2484 114 28 2 chr10 35470025 35470419 -104846346 - L1MA2 LINE L1 0 6304 5901 358 240 107 117 chr10 35470795 35471187 -104845578 - L1ME4a LINE L1 -4 6117 5730 494 297 108 55 chr10 35471293 35471430 -104845335 - L1ME4a LINE L1 -429 5692 5564 2056 148 36 0 chr10 35471430 35471760 -104845005 - MER2 DNA MER2_type 0 344 3 494 297 108 55 chr10 35471760 35472003 -104844762 - L1ME4a LINE L1 -557 5564 5292 268 215 129 11 chr10 35472576 35472669 -104844096 - L2 LINE L2 -509 2805 2702 196 266 94 86 chr10 35473259 35473387 -104843378 + L2 LINE L2 2706 2834 -480 1940 142 27 0 chr10 35473408 35473704 -104843061 + AluSx SINE Alu 2 305 -7 1433 74 0 0 chr10 35473815 35473991 -104842774 + AluSc SINE Alu 128 303 -6 238 219 53 79 chr10 35475666 35475780 -104840985 + L2 LINE L2 1731 1841 -1473 1418 199 48 12 chr10 35475786 35476123 -104840642 - Tigger3b DNA MER2_type -3 1228 880 441 54 0 0 chr10 35476125 35476181 -104840584 + (TGAG)n Simple_repeat Simple_repeat 1 56 0 2179 141 125 44 chr10 35476255 35476476 -104840289 - Tigger3b DNA MER2_type -2492 536 334 2271 98 0 3 chr10 35476476 35476773 -104839992 + AluSc SINE Alu 1 296 -13 2179 141 125 44 chr10 35476773 35477047 -104839718 - Tigger3b DNA MER2_type -2694 334 1 250 294 44 62 chr10 35477452 35477612 -104839153 - L2 LINE L2 -193 3079 2923 325 353 98 0 chr10 35478860 35478993 -104837772 + L2 LINE L2 3116 3261 -11 432 244 0 0 chr10 35478996 35479078 -104837687 + AluJo SINE Alu 14 95 -217 1098 144 0 30 chr10 35479096 35479263 -104837502 - AluJb SINE Alu -16 296 135 566 204 86 38 chr10 35479263 35479449 -104837316 + AluJo SINE Alu 104 298 -14 358 238 91 62 chr10 35480112 35480322 -104836443 - LTR16C LTR ERVL 0 491 276 2407 58 3 3 chr10 35481730 35482021 -104834744 + AluY SINE Alu 1 291 -20 2013 134 14 0 chr10 35483263 35483555 -104833210 - AluSx SINE Alu -16 296 1 203 365 26 9 chr10 35483714 35483829 -104832936 - L2 LINE L2 -2564 750 634 324 0 0 0 chr10 35483845 35483881 -104832884 + (TG)n Simple_repeat Simple_repeat 2 37 0 617 250 43 0 chr10 35484209 35484349 -104832416 + MIR SINE MIR 116 261 -1 1888 138 140 6 chr10 35484909 35485258 -104831507 + MSTD LTR MaLR 1 396 0 360 325 60 7 chr10 35485587 35485738 -104831027 - MIR SINE MIR -79 183 25 25 51 0 0 chr10 35486215 35486254 -104830511 + AT_rich Low_complexity Low_complexity 1 39 0 402 269 10 0 chr10 35490076 35490180 -104826585 - MIR SINE MIR -73 135 31 341 286 107 74 chr10 35490382 35490773 -104825992 + L2 LINE L2 2081 2484 -830 319 212 59 47 chr10 35490841 35491011 -104825754 - Charlie7 DNA MER1_type -1 2611 2440 236 283 0 0 chr10 35491129 35491182 -104825583 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 25 0 0 0 chr10 35492807 35492832 -104823933 + AT_rich Low_complexity Low_complexity 1 25 0 1803 160 14 0 chr10 35492838 35493125 -104823640 + AluJb SINE Alu 1 291 -21 584 244 124 16 chr10 35493349 35493542 -104823223 + MIR SINE MIR 14 227 -35 307 274 84 11 chr10 35493582 35493677 -104823088 - MIR SINE MIR -108 154 53 311 232 133 88 chr10 35493901 35494082 -104822683 + L1M2 LINE L1 1159 1347 -5502 336 290 206 61 chr10 35494114 35494413 -104822352 + L1M2 LINE L1 370 625 -6224 258 81 0 0 chr10 35494413 35494450 -104822315 + (CCCCCG)n Simple_repeat Simple_repeat 1 37 0 336 290 206 61 chr10 35494450 35494802 -104821963 + L1M2 LINE L1 625 1115 -5734 205 254 0 30 chr10 35496267 35496334 -104820431 + L2 LINE L2 3208 3272 0 347 151 0 41 chr10 35497057 35497130 -104819635 - MER94 DNA DNA -64 70 1 1084 143 71 91 chr10 35497740 35497992 -104818773 + AluJo SINE Alu 42 288 -24 279 0 0 0 chr10 35498164 35498195 -104818570 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 35498839 35498861 -104817904 + AT_rich Low_complexity Low_complexity 1 22 0 1434 136 33 0 chr10 35500282 35500496 -104816269 - AluSq SINE Alu -10 303 83 2269 110 0 3 chr10 35500526 35500827 -104815938 + AluSx SINE Alu 1 300 -12 443 263 120 0 chr10 35500828 35500961 -104815804 - MIR SINE MIR -113 149 1 755 208 76 0 chr10 35501070 35501214 -104815551 + FRAM SINE Alu 2 156 -10 2305 118 0 0 chr10 35501219 35501524 -104815241 - AluSx SINE Alu -7 305 1 409 380 88 0 chr10 35501952 35502157 -104814608 + L2 LINE L2 2818 3040 -273 5014 174 51 28 chr10 35502173 35503271 -104813494 + L1MB2 LINE L1 4004 5075 -1096 2228 125 0 0 chr10 35503271 35503574 -104813191 - AluSq SINE Alu -10 303 1 5014 174 51 28 chr10 35503574 35503904 -104812861 + L1MB2 LINE L1 5075 5396 -775 195 42 0 0 chr10 35503904 35503928 -104812837 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5014 174 51 28 chr10 35503928 35504616 -104812149 + L1MB2 LINE L1 5396 6171 0 338 284 0 0 chr10 35504616 35504704 -104812061 + L1MC4a LINE L1 6611 6698 -1110 356 287 36 24 chr10 35505136 35505303 -104811462 + L1MC4 LINE L1 6893 7061 -981 2138 138 3 0 chr10 35505359 35505657 -104811108 + AluSx SINE Alu 1 299 -13 433 264 126 45 chr10 35505681 35506063 -104810702 + L1MC5 LINE L1 7507 7919 -42 2116 124 0 7 chr10 35506114 35506413 -104810352 + AluSx SINE Alu 1 297 -15 185 262 131 0 chr10 35507190 35507274 -104809491 + L3 LINE CR1 692 786 -791 392 229 180 49 chr10 35507989 35508172 -104808593 + MIR SINE MIR 2 208 -54 301 339 52 31 chr10 35508457 35508649 -104808116 + L3b LINE CR1 1120 1315 -268 240 302 81 0 chr10 35509517 35509603 -104807162 + L3b LINE CR1 1392 1484 -99 1772 164 20 3 chr10 35510133 35510431 -104806334 + AluJo SINE Alu 1 303 -9 2310 82 14 7 chr10 35510517 35510811 -104805954 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr10 35511393 35511415 -104805350 + AT_rich Low_complexity Low_complexity 1 22 0 922 128 0 0 chr10 35511420 35511545 -104805220 - AluJb SINE Alu -187 125 1 2244 168 20 74 chr10 35511948 35512435 -104804330 + LOR1b LTR ERV1 1 461 0 2478 85 0 3 chr10 35512692 35512997 -104803768 - AluSx SINE Alu -8 304 1 276 264 118 0 chr10 35514002 35514040 -104802725 + MER5C DNA MER1_type 2 34 -290 617 152 0 80 chr10 35514040 35514139 -104802626 + L1PB1 LINE L1 6024 6111 -40 2241 115 3 0 chr10 35514139 35514443 -104802322 - AluSg SINE Alu -5 305 1 617 152 0 80 chr10 35514443 35514481 -104802284 + L1PB1 LINE L1 6111 6150 -1 276 264 118 0 chr10 35514481 35514552 -104802213 + MER5C DNA MER1_type 34 124 -200 296 215 0 0 chr10 35514562 35514627 -104802138 + MER5C DNA MER1_type 226 290 -34 213 151 0 75 chr10 35514666 35514719 -104802046 + MER5C DNA MER1_type 273 321 -3 387 0 0 0 chr10 35514996 35515039 -104801726 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 6362 49 1 4 chr10 35515040 35515773 -104800992 - L1PA6 LINE L1 -13 6141 5411 186 323 73 0 chr10 35515781 35515877 -104800888 - MIR SINE MIR -1 261 159 635 222 116 0 chr10 35516028 35516226 -104800539 + MIR SINE MIR 39 259 -3 2343 94 0 7 chr10 35516609 35516916 -104799849 + AluSx SINE Alu 1 305 -7 355 269 135 10 chr10 35516916 35517020 -104799745 + L2 LINE L2 3197 3313 0 1293 169 65 4 chr10 35517874 35518152 -104798613 - AluJo SINE Alu -17 295 1 266 200 0 0 chr10 35518213 35518258 -104798507 + L3 LINE CR1 1526 1570 -7 967 203 0 0 chr10 35518974 35519132 -104797633 - FRAM SINE Alu -8 158 1 250 319 0 0 chr10 35519133 35519202 -104797563 + L2 LINE L2 3245 3313 0 1759 124 0 12 chr10 35519252 35519502 -104797263 - AluSx SINE Alu -11 301 55 185 289 26 0 chr10 35519526 35519564 -104797201 + L2 LINE L2 3147 3185 -87 369 235 118 0 chr10 35519873 35520026 -104796739 + L1ME4a LINE L1 5713 5883 -238 440 247 114 55 chr10 35520032 35520303 -104796462 + MLT1L LTR MaLR 2 288 -327 247 248 57 67 chr10 35520757 35520862 -104795903 + MLT1L LTR MaLR 504 607 -8 342 167 8 108 chr10 35520926 35521046 -104795719 + L1ME4a LINE L1 6007 6114 -7 1956 135 7 3 chr10 35521057 35521346 -104795419 - AluSx SINE Alu -22 290 1 2143 107 10 3 chr10 35521613 35521912 -104794853 + AluSq SINE Alu 1 301 -12 223 261 87 33 chr10 35521945 35522037 -104794728 - MIR SINE MIR -54 208 112 413 207 12 0 chr10 35522179 35522261 -104794504 - MLT1K LTR MaLR -14 574 492 1047 258 9 0 chr10 35522843 35523056 -104793709 - MER58A DNA MER1_type -1 223 9 1785 161 20 7 chr10 35523356 35523660 -104793105 + AluJb SINE Alu 1 308 -4 1884 126 13 31 chr10 35524456 35524773 -104791992 - AluJb SINE Alu -1 311 1 207 0 0 0 chr10 35525234 35525257 -104791508 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1147 195 26 4 chr10 35525394 35525620 -104791145 - L1MB3 LINE L1 0 6183 5953 2502 142 10 116 chr10 35525738 35525895 -104790870 - L1MB3 LINE L1 -210 5973 5801 2216 120 0 0 chr10 35525895 35526195 -104790570 - AluSx SINE Alu -12 300 1 2502 142 10 116 chr10 35526195 35526454 -104790311 - L1MB3 LINE L1 -382 5801 5634 1972 158 0 0 chr10 35526454 35526765 -104790000 - AluSx SINE Alu -1 311 1 2502 142 10 116 chr10 35526765 35526933 -104789832 - L1MB3 LINE L1 -549 5634 5450 523 115 26 0 chr10 35528018 35528096 -104788669 - L1MC1 LINE L1 0 6333 6254 2358 155 86 41 chr10 35528101 35528297 -104788468 - L1MC3 LINE L1 -661 5683 5497 2125 134 0 0 chr10 35528297 35528589 -104788176 - AluSx SINE Alu -20 292 1 2358 155 86 41 chr10 35528589 35528984 -104787781 - L1MC3 LINE L1 -847 5497 5302 2700 92 3 72 chr10 35528984 35529373 -104787392 - THE1B LTR MaLR -2 362 1 2358 155 86 41 chr10 35529373 35529516 -104787249 - L1MC3 LINE L1 -1042 5302 5167 1822 164 29 0 chr10 35529820 35530121 -104786644 + AluSx SINE Alu 1 309 0 1603 169 14 14 chr10 35530147 35530442 -104786323 + L1MC2 LINE L1 6041 6335 -9 2183 105 14 0 chr10 35530656 35530942 -104785823 - AluSg SINE Alu -20 290 1 4783 81 24 5 chr10 35531177 35531805 -104784960 - L1PA13 LINE L1 0 6163 5524 327 259 68 68 chr10 35531805 35531952 -104784813 + MLT1E1 LTR MaLR 4 150 -504 1324 188 84 82 chr10 35532013 35532380 -104784385 + MLT1E1 LTR MaLR 287 654 0 268 298 47 35 chr10 35533090 35533261 -104783504 + HAL1 LINE L1 1179 1351 -1156 306 157 0 0 chr10 35533298 35533349 -104783416 - LTR40b LTR ERVL 0 462 412 2136 108 17 0 chr10 35533750 35534038 -104782727 + AluSg SINE Alu 1 293 -17 327 49 0 0 chr10 35534038 35534079 -104782686 + (TA)n Simple_repeat Simple_repeat 2 42 0 1616 188 10 16 chr10 35534210 35534519 -104782246 + AluJb SINE Alu 1 307 -5 1209 167 12 124 chr10 35534693 35535023 -104781742 - MLT1A1 LTR MaLR 0 365 73 2205 125 0 0 chr10 35535044 35535348 -104781417 - AluSp SINE Alu -9 304 1 1810 158 0 7 chr10 35535354 35535638 -104781127 - L1PA16 LINE L1 -11 6155 5874 9559 182 29 9 chr10 35535638 35537983 -104778782 - L1PA16 LINE L1 -508 5658 3268 1623 272 35 2 chr10 35537984 35538503 -104778262 + L1PA16 LINE L1 2725 3260 -2886 378 165 25 25 chr10 35538503 35538582 -104778183 - MLT1A1 LTR MaLR -344 84 6 384 275 116 51 chr10 35538993 35539269 -104777496 + L1MC4a LINE L1 5613 5906 -1902 744 155 16 16 chr10 35539315 35539444 -104777321 + FLAM_C SINE Alu 2 130 -3 227 270 90 18 chr10 35539469 35539580 -104777185 + L1ME4a LINE L1 5978 6096 -25 2583 113 5 24 chr10 35539619 35539990 -104776775 - THE1B LTR MaLR 0 364 1 3509 167 16 18 chr10 35539992 35540598 -104776167 + MER6A DNA MER2_type 1 605 0 2106 112 3 14 chr10 35541296 35541610 -104775155 - AluSq SINE Alu 0 313 1 1353 124 9 40 chr10 35541612 35541837 -104774928 - AluJo SINE Alu -17 295 78 253 174 158 0 chr10 35542753 35542825 -104773940 - MIR SINE MIR -77 131 49 2077 136 0 0 chr10 35543234 35543536 -104773229 + AluSx SINE Alu 1 302 -10 2175 118 3 0 chr10 35543844 35544140 -104772625 - AluSx SINE Alu -15 297 1 1687 148 7 40 chr10 35544304 35544439 -104772326 + AluJb SINE Alu 1 139 -173 2094 86 3 46 chr10 35544439 35544922 -104771843 + AluSq SINE Alu 1 470 0 1124 6 22 50 chr10 35544742 35544965 -104771800 + (TAAAA)n Simple_repeat Simple_repeat 3 220 0 1687 148 7 40 chr10 35544922 35545124 -104771641 + AluJb SINE Alu 139 288 -24 23 68 0 0 chr10 35545256 35545300 -104771465 + AT_rich Low_complexity Low_complexity 1 44 0 183 295 158 21 chr10 35546752 35546847 -104769918 - MIR SINE MIR -108 154 47 1751 155 3 3 chr10 35547700 35547984 -104768781 - AluJo SINE Alu -8 304 21 6040 78 24 63 chr10 35548067 35549017 -104767748 + L1PA11 LINE L1 5266 6174 0 2298 97 0 7 chr10 35549431 35549729 -104767036 + AluSg SINE Alu 1 296 -14 5282 128 63 73 chr10 35549842 35550969 -104765796 + pTR5 LTR ERV1 742 2029 -409 300 152 58 68 chr10 35550969 35551072 -104765693 + LTR30 LTR ERV1 377 475 -94 1134 151 59 0 chr10 35551072 35551258 -104765507 + LTR12 LTR ERV1 385 581 -133 1564 190 3 40 chr10 35551307 35551586 -104765179 + AluJo SINE Alu 1 270 -32 2203 108 0 0 chr10 35551586 35551881 -104764884 - AluSq SINE Alu -18 295 1 1564 190 3 40 chr10 35551881 35551901 -104764864 + AluJo SINE Alu 270 289 -13 2289 143 33 6 chr10 35553179 35553544 -104763221 - THE1C LTR MaLR 0 375 1 779 238 38 0 chr10 35553888 35554073 -104762692 - L1MC/D LINE L1 -1986 5822 5631 26 0 0 0 chr10 35554364 35554390 -104762375 + AT_rich Low_complexity Low_complexity 1 26 0 317 219 21 42 chr10 35554522 35554618 -104762147 - HAL1b LINE L1 -989 359 266 256 108 0 0 chr10 35554942 35554979 -104761786 + MSTA LTR MaLR 247 283 -145 862 141 8 0 chr10 35555413 35555534 -104761231 + FLAM_C SINE Alu 2 123 -10 21 0 0 0 chr10 35555534 35555555 -104761210 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 35556520 35556549 -104760216 + AT_rich Low_complexity Low_complexity 1 29 0 4660 45 2 2 chr10 35556556 35557117 -104759648 - L1PA8 LINE L1 -4 6168 5608 5406 43 1 1 chr10 35556559 35557206 -104759559 - L1PA8 LINE L1 -7 6165 5519 225 299 0 0 chr10 35557646 35557723 -104759042 - MLT1I LTR MaLR -229 180 104 1046 140 7 0 chr10 35557816 35557966 -104758799 + AluSq/x SINE Alu 1 151 -162 529 240 12 8 chr10 35557968 35558093 -104758672 + L1PB4 LINE L1 6030 6151 0 441 244 64 58 chr10 35558277 35558341 -104758424 - MIR SINE MIR -73 189 127 2430 98 0 0 chr10 35558341 35558648 -104758117 + AluSx SINE Alu 1 307 -5 441 244 64 58 chr10 35558648 35558739 -104758026 - MIR SINE MIR -135 127 33 747 151 8 8 chr10 35559971 35560090 -104756675 + FLAM_C SINE Alu 9 127 -16 180 0 0 0 chr10 35560091 35560111 -104756654 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 202 146 0 24 chr10 35560399 35560440 -104756325 + (TTTAA)n Simple_repeat Simple_repeat 4 43 0 1894 148 26 7 chr10 35561033 35561464 -104755301 - AluSx SINE Alu 0 437 1 490 216 29 22 chr10 35561607 35561746 -104755019 - MLT1J2 LTR MaLR -290 160 21 339 285 33 117 chr10 35561833 35562204 -104754561 + L2 LINE L2 2746 3089 -183 324 265 20 41 chr10 35562324 35562422 -104754343 - MLT1J2 LTR MaLR -18 432 337 488 377 0 0 chr10 35564141 35564295 -104752470 + MIR3 SINE MIR 44 197 -11 1267 61 0 11 chr10 35564925 35565105 -104751660 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2176 99 0 14 chr10 35565105 35565389 -104751376 - AluSq SINE Alu -33 280 1 531 220 75 61 chr10 35565598 35565839 -104750926 - LTR1B LTR ERV1 -383 443 149 1673 176 19 38 chr10 35566060 35566373 -104750392 - AluJo SINE Alu -1 311 5 1961 162 0 13 chr10 35566427 35566736 -104750029 - AluJb SINE Alu -7 305 1 189 0 0 0 chr10 35567150 35567171 -104749594 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1925 141 0 7 chr10 35567506 35567790 -104748975 - AluJo SINE Alu -30 282 1 315 273 126 22 chr10 35568178 35568361 -104748404 - MIR SINE MIR -17 245 44 1835 166 0 10 chr10 35568688 35568990 -104747775 - AluJb SINE Alu -13 299 1 22 35 0 0 chr10 35570613 35570642 -104746123 + AT_rich Low_complexity Low_complexity 1 29 0 1819 131 0 0 chr10 35570643 35570902 -104745863 + AluSx SINE Alu 47 305 -7 21 0 0 0 chr10 35570957 35570978 -104745787 + AT_rich Low_complexity Low_complexity 1 21 0 1787 113 0 4 chr10 35571075 35571322 -104745443 - AluSg/x SINE Alu 0 310 65 1268 152 0 33 chr10 35571617 35571821 -104744944 + AluJb SINE Alu 86 284 -28 2301 104 3 3 chr10 35571821 35572119 -104744646 - AluSg SINE Alu -12 298 1 25 0 0 0 chr10 35572126 35572151 -104744614 + AT_rich Low_complexity Low_complexity 1 25 0 2117 123 0 16 chr10 35573391 35573701 -104743064 - AluJb SINE Alu -7 305 1 3654 184 124 33 chr10 35573764 35575168 -104741597 + MER52A LTR ERV1 2 1755 0 296 319 115 6 chr10 35575187 35575344 -104741421 + MIR SINE MIR 66 239 -23 1859 166 3 10 chr10 35575737 35576045 -104740720 + AluJo SINE Alu 1 306 -6 540 267 91 9 chr10 35576711 35576921 -104739844 - MIR SINE MIR -24 238 12 2094 146 0 0 chr10 35577012 35577320 -104739445 + AluJb SINE Alu 1 308 -4 258 136 0 0 chr10 35577328 35577372 -104739393 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1111 184 209 0 chr10 35579569 35579826 -104736939 + AluJb SINE Alu 1 306 0 21 71 0 0 chr10 35580047 35580089 -104736676 + AT_rich Low_complexity Low_complexity 1 42 0 594 187 28 0 chr10 35580165 35580272 -104736493 + FLAM_C SINE Alu 2 111 -32 279 0 0 0 chr10 35580273 35580304 -104736461 + (TC)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr10 35580303 35580329 -104736436 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2556 61 0 0 chr10 35580330 35580625 -104736140 - AluY SINE Alu -16 295 1 246 296 28 0 chr10 35580800 35580871 -104735894 - MIR SINE MIR -177 85 13 367 306 104 2 chr10 35581745 35581918 -104734847 - MIR3 SINE MIR 0 208 18 1270 96 0 0 chr10 35582088 35582255 -104734510 - AluSg/x SINE Alu -9 303 137 2550 164 7 29 chr10 35582438 35582890 -104733875 - LTR24 LTR ERV1 0 467 26 2058 141 0 28 chr10 35582890 35583210 -104733555 + AluSx SINE Alu 1 311 -1 362 200 30 20 chr10 35583289 35583389 -104733376 + AluS SINE Alu 1 101 -202 1777 133 15 52 chr10 35583563 35583672 -104733093 + AluSx SINE Alu 1 113 -199 2296 108 0 19 chr10 35583672 35583988 -104732777 + AluSg SINE Alu 1 310 0 1777 133 15 52 chr10 35583988 35584202 -104732563 + AluSx SINE Alu 113 312 0 3297 147 24 17 chr10 35584410 35584585 -104732180 - LTR49 LTR ERV1 0 595 423 970 77 7 28 chr10 35584585 35584728 -104732037 - L1PA10 LINE L1 0 6168 6029 3297 147 24 17 chr10 35584728 35585143 -104731622 - LTR49 LTR ERV1 -172 423 1 1427 163 7 43 chr10 35585485 35585786 -104730979 - LTR1 LTR ERV1 -495 290 1 1103 112 19 9 chr10 35585786 35585944 -104730821 - L1PB3 LINE L1 -198 5953 5802 330 67 0 0 chr10 35585944 35585989 -104730776 + (TG)n Simple_repeat Simple_repeat 1 45 0 1103 112 19 9 chr10 35585989 35586016 -104730749 - L1PB3 LINE L1 -349 5802 5777 272 257 20 20 chr10 35586016 35586117 -104730648 + (TATG)n Simple_repeat Simple_repeat 3 103 0 1544 103 13 13 chr10 35586117 35586129 -104730636 - L1PB3 LINE L1 -363 5791 5780 183 42 0 0 chr10 35586129 35586153 -104730612 + (TC)n Simple_repeat Simple_repeat 1 24 0 1544 103 13 13 chr10 35586153 35586373 -104730392 - L1PB3 LINE L1 -373 5781 5559 3683 139 43 129 chr10 35586373 35587896 -104728869 + pTR5 LTR ERV1 744 2606 0 847 142 8 8 chr10 35587896 35588030 -104728735 + pTR5 LTR ERV1 270 403 -2035 2636 175 59 1 chr10 35588030 35588855 -104727910 - L1P5 LINE L1 -613 5541 4668 792 134 195 0 chr10 35588858 35589007 -104727758 - LTR29 LTR ERV1 -285 337 160 616 172 10 0 chr10 35589036 35589135 -104727630 - AluJ/FLAM SINE Alu -211 101 2 297 309 62 48 chr10 35591789 35591999 -104724766 - MIR SINE MIR -3 259 47 1649 169 14 21 chr10 35592279 35592591 -104724174 + AluJo SINE Alu 1 310 0 3328 151 24 12 chr10 35593279 35593854 -104722911 - LTR49 LTR ERV1 -13 582 1 912 192 30 0 chr10 35594181 35594348 -104722417 - FRAM SINE Alu 0 176 5 3532 130 6 6 chr10 35594348 35594872 -104721893 + MER41B LTR ERV1 5 528 -107 24 32 0 0 chr10 35594878 35594909 -104721856 + AT_rich Low_complexity Low_complexity 1 31 0 854 84 42 0 chr10 35595763 35595882 -104720883 + MER41B LTR ERV1 512 635 0 257 269 0 0 chr10 35595893 35595960 -104720805 - MIR SINE MIR -56 152 86 421 288 59 51 chr10 35596632 35596868 -104719897 + Charlie8 DNA MER1_type 2 239 -2178 4600 86 13 0 chr10 35597053 35597673 -104719092 - L1PB2 LINE L1 -2 6149 5522 277 379 26 9 chr10 35597700 35597816 -104718949 - L2 LINE L2 -1 3312 3195 1889 204 105 11 chr10 35598126 35598478 -104718287 + MLT1D LTR MaLR 3 409 -96 1731 159 3 36 chr10 35598478 35598779 -104717986 - AluJo SINE Alu -21 291 1 1889 204 105 11 chr10 35598779 35598883 -104717882 + MLT1D LTR MaLR 409 502 -3 4180 102 14 55 chr10 35599774 35600301 -104716464 + L1MA3 LINE L1 5637 6131 -174 2165 106 6 39 chr10 35600301 35600612 -104716153 + AluSx SINE Alu 3 303 -9 4180 102 14 55 chr10 35600612 35600772 -104715993 + L1MA3 LINE L1 6131 6296 -9 2090 131 89 6 chr10 35601524 35601860 -104714905 + THE1B LTR MaLR 1 364 0 313 312 76 19 chr10 35602405 35602510 -104714255 + MIR SINE MIR 55 173 -89 2274 150 44 3 chr10 35602510 35602897 -104713868 + MER57A LTR ERV1 1 403 0 313 312 76 19 chr10 35602897 35602948 -104713817 + MIR SINE MIR 173 220 -42 886 130 0 8 chr10 35603021 35603152 -104713613 + AluSq/x SINE Alu 1 130 -182 1347 89 0 0 chr10 35603252 35603421 -104713344 + AluSp SINE Alu 132 300 -13 768 176 68 7 chr10 35603560 35603708 -104713057 + MER58A DNA MER1_type 37 193 -31 2191 132 0 0 chr10 35603712 35604022 -104712743 - AluSx SINE Alu -2 310 1 578 291 94 0 chr10 35604095 35604308 -104712457 - MLT1J LTR MaLR -278 233 1 947 195 95 0 chr10 35604523 35604723 -104712042 - MER20 DNA MER1_type 0 219 1 323 271 62 10 chr10 35605172 35605268 -104711497 - MER5A DNA MER1_type -8 181 81 1992 153 0 0 chr10 35606229 35606530 -104710235 + AluSx SINE Alu 1 301 -11 242 291 19 12 chr10 35606602 35606697 -104710068 + T-rich Low_complexity Low_complexity 2 163 0 625 112 0 35 chr10 35606862 35606978 -104709787 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 777 186 23 0 chr10 35607008 35607137 -104709628 - FLAM_C SINE Alu 0 133 2 2481 176 32 0 chr10 35607607 35608039 -104708726 - MLT1C LTR MaLR 0 467 22 370 229 25 42 chr10 35608112 35608230 -104708535 - MER96B DNA MER1_type? -2 415 300 1295 195 74 27 chr10 35608257 35608555 -104708210 - AluJo SINE Alu 0 312 1 319 198 0 25 chr10 35608556 35608637 -104708128 + MER96B DNA MER1_type? 101 179 -238 2699 105 11 8 chr10 35609184 35609547 -104707218 - THE1B LTR MaLR 0 364 1 399 265 87 51 chr10 35609603 35609799 -104706966 + MIR3 SINE MIR 4 206 -2 228 330 0 9 chr10 35610773 35610879 -104705886 + (CA)n Simple_repeat Simple_repeat 1 105 0 2349 93 0 0 chr10 35610889 35611180 -104705585 - AluSx SINE Alu -19 293 3 1183 106 12 0 chr10 35611485 35611645 -104705120 + FRAM SINE Alu 2 163 -13 2175 113 0 0 chr10 35611876 35612169 -104704596 - AluSx SINE Alu -19 293 1 2199 204 81 38 chr10 35612637 35612782 -104703983 + MLT1E3 LTR MaLR 7 144 -480 2060 129 0 0 chr10 35612782 35613159 -104703606 + AluSc SINE Alu 1 377 0 2199 204 81 38 chr10 35613159 35613596 -104703169 + MLT1E3 LTR MaLR 144 615 -9 1396 162 128 26 chr10 35614644 35614910 -104701855 - AluJo SINE Alu -16 296 4 2211 125 3 0 chr10 35614969 35615280 -104701485 - AluSx SINE Alu 0 312 1 204 367 87 21 chr10 35615287 35615576 -104701189 + L2 LINE L2 2228 2535 -779 4762 131 10 19 chr10 35615634 35615990 -104700775 - L1PB3 LINE L1 -4 6150 5792 420 20 0 0 chr10 35615990 35616039 -104700726 + (TG)n Simple_repeat Simple_repeat 1 49 0 2904 99 0 0 chr10 35616039 35616401 -104700364 + THE1B LTR MaLR 3 364 0 4762 131 10 19 chr10 35616401 35616763 -104700002 - L1PB3 LINE L1 -360 5794 5438 426 174 35 0 chr10 35617411 35617497 -104699268 + MER81 DNA DNA 26 114 0 389 244 0 0 chr10 35617617 35617707 -104699058 + MLT1J LTR MaLR 415 504 -7 265 85 213 0 chr10 35618815 35618862 -104697903 - AluJo SINE Alu -4 298 242 1206 158 15 0 chr10 35618862 35619058 -104697707 - AluJo SINE Alu -113 199 1 1724 184 0 13 chr10 35619778 35620082 -104696683 + AluJo SINE Alu 1 300 -12 400 352 31 0 chr10 35621597 35621725 -104695040 - L2 LINE L2 0 3272 3141 342 53 0 105 chr10 35621770 35621827 -104694938 + L1MA3 LINE L1 6255 6305 0 684 297 32 11 chr10 35622175 35622360 -104694405 - MLT1I LTR MaLR -188 221 33 22 35 0 0 chr10 35623503 35623532 -104693233 + AT_rich Low_complexity Low_complexity 1 29 0 1869 176 0 3 chr10 35624018 35624320 -104692445 - AluJo SINE Alu -11 301 1 2708 115 8 8 chr10 35625489 35625864 -104690901 + THE1C LTR MaLR 1 375 0 395 311 77 66 chr10 35626180 35626650 -104690115 - L2 LINE L2 -1117 2197 1723 823 171 0 0 chr10 35626684 35626807 -104689958 - FLAM_C SINE Alu -20 123 1 3234 113 9 0 chr10 35626980 35627430 -104689335 + L1PA16 LINE L1 5704 6157 -9 509 286 136 14 chr10 35627449 35627662 -104689103 - MIR SINE MIR -21 241 3 1590 121 18 7 chr10 35627811 35628083 -104688682 + MER6 DNA MER2_type 319 853 -12 1746 148 26 23 chr10 35628706 35629010 -104687755 - AluJo SINE Alu -3 309 5 228 338 0 0 chr10 35629964 35630041 -104686724 - LTR67 LTR ERVL -8 549 473 2273 123 50 36 chr10 35630371 35630730 -104686035 + THE1B LTR MaLR 1 364 0 219 265 20 34 chr10 35631358 35631505 -104685260 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 2547 139 23 77 chr10 35632639 35633248 -104683517 - MER4E LTR ERV1 0 779 1 186 43 0 0 chr10 35633273 35633296 -104683469 + (TTCTCC)n Simple_repeat Simple_repeat 1 23 0 1705 178 0 17 chr10 35633296 35633594 -104683171 - AluJb SINE Alu -9 303 11 24 32 0 0 chr10 35633670 35633701 -104683064 + AT_rich Low_complexity Low_complexity 1 31 0 3134 235 35 34 chr10 35634089 35634283 -104682482 - L1ME1 LINE L1 -14 6152 5960 408 82 0 184 chr10 35634283 35634381 -104682384 - MADE1 DNA Mariner 0 80 1 3134 235 35 34 chr10 35634381 35635157 -104681608 - L1ME1 LINE L1 -206 5960 5182 1560 153 73 11 chr10 35635215 35635490 -104681275 - AluJo SINE Alu -20 292 1 1461 196 41 4 chr10 35636256 35636527 -104680238 + AluJo SINE Alu 6 286 -26 222 62 0 0 chr10 35636532 35636564 -104680201 + (CATA)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 35637160 35637183 -104679582 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1385 164 0 9 chr10 35638131 35638345 -104678420 - AluSg/x SINE Alu -16 294 83 2471 156 95 5 chr10 35639559 35640044 -104676721 - MER61D LTR ERV1 0 734 1 1730 236 52 82 chr10 35640464 35641023 -104675742 + MLT1F1 LTR MaLR 1 567 0 313 309 16 8 chr10 35641023 35641149 -104675616 + L1ME4a LINE L1 5748 5874 -247 21 36 0 0 chr10 35641512 35641540 -104675225 + AT_rich Low_complexity Low_complexity 1 28 0 1878 153 3 0 chr10 35641598 35641886 -104674879 + AluSx SINE Alu 20 308 -4 2660 196 125 61 chr10 35642119 35642895 -104673870 + LTR1B LTR ERV1 1 826 0 234 316 246 6 chr10 35643354 35643525 -104673240 + MIR SINE MIR 40 251 -11 216 0 0 0 chr10 35643919 35643943 -104672822 + (T)n Simple_repeat Simple_repeat 1 24 0 623 283 47 32 chr10 35644319 35644541 -104672224 - MIR SINE MIR -33 229 16 690 337 104 19 chr10 35646290 35646703 -104670062 - L3b LINE CR1 -11 1572 1125 273 136 0 0 chr10 35647776 35647820 -104668945 + MADE1 DNA Mariner 1 44 -36 2158 98 28 0 chr10 35647836 35648123 -104668642 - L1PA10 LINE L1 -8 6160 5866 340 77 0 19 chr10 35648123 35648175 -104668590 + MADE1 DNA Mariner 30 80 0 291 343 66 29 chr10 35648563 35648700 -104668065 - MIR3 SINE MIR -30 178 37 298 297 25 25 chr10 35649809 35649927 -104666838 + L3 LINE CR1 1390 1507 -70 2125 124 0 0 chr10 35651069 35651360 -104665405 + AluSg SINE Alu 1 291 -19 231 229 152 76 chr10 35652408 35652513 -104664252 - MIR SINE MIR -62 146 34 264 261 0 14 chr10 35654112 35654181 -104662584 - MIR3 SINE MIR -52 156 89 216 253 10 111 chr10 35654337 35654436 -104662329 - MER5A DNA MER1_type -13 176 88 211 313 45 0 chr10 35655344 35655411 -104661354 + MIR SINE MIR 42 111 -97 434 293 100 30 chr10 35655599 35655869 -104660896 + L3b LINE CR1 1129 1417 -166 1237 241 96 14 chr10 35655908 35656273 -104660492 - MLT1G LTR MaLR -1 589 195 4583 179 8 25 chr10 35656349 35657200 -104659565 - L1MA10 LINE L1 0 6334 5498 642 140 0 0 chr10 35657200 35657293 -104659472 + L1M2 LINE L1 5370 5462 -850 357 326 60 21 chr10 35657293 35657492 -104659273 - MLT1G LTR MaLR -332 263 9 207 244 157 70 chr10 35657519 35657634 -104659131 - L2 LINE L2 0 3272 3148 737 282 4 61 chr10 35658653 35658930 -104657835 - MIR SINE MIR -1 261 1 1777 186 0 0 chr10 35658996 35659308 -104657457 - AluSx SINE Alu 0 312 1 195 353 73 0 chr10 35659427 35659495 -104657270 - L2 LINE L2 0 3272 3200 1864 87 65 4 chr10 35659719 35659995 -104656770 - AluSg SINE Alu -17 293 1 379 235 118 15 chr10 35659998 35660134 -104656631 - MIR SINE MIR -7 255 106 1477 195 0 17 chr10 35660307 35660594 -104656171 - AluJo SINE Alu -20 292 11 25 0 0 0 chr10 35662310 35662335 -104654430 + AT_rich Low_complexity Low_complexity 1 25 0 573 140 0 65 chr10 35662335 35662442 -104654323 - FRAM SINE Alu -15 161 62 1692 141 60 20 chr10 35662921 35663220 -104653545 + AluSx SINE Alu 1 311 -1 837 169 29 3 chr10 35663618 35663941 -104652824 + CT-rich Low_complexity Low_complexity 1 331 0 917 168 7 0 chr10 35663945 35664100 -104652665 - AluSg/x SINE Alu -32 280 125 2157 72 0 10 chr10 35664115 35664406 -104652359 - AluY SINE Alu -16 295 8 262 340 31 0 chr10 35664728 35664825 -104651940 + MIR3 SINE MIR 58 157 -51 418 156 0 13 chr10 35666131 35666208 -104650557 + MER116 DNA Mariner 1 76 -4 778 187 7 14 chr10 35666409 35666548 -104650217 + AluJo SINE Alu 2 139 -173 1590 191 29 38 chr10 35666976 35667093 -104649672 - MER1B DNA MER1_type -2373 337 220 2367 80 0 0 chr10 35667093 35667393 -104649372 - AluSc SINE Alu -9 300 1 1590 191 29 38 chr10 35667393 35667615 -104649150 - MER1B DNA MER1_type -2490 220 1 207 250 59 15 chr10 35667646 35667714 -104649051 - L3b LINE CR1 -231 1352 1282 249 314 80 40 chr10 35667988 35668029 -104648736 + L2 LINE L2 2565 2603 -711 1554 169 47 14 chr10 35668029 35668325 -104648440 - AluJo SINE Alu -6 306 1 249 314 80 40 chr10 35668325 35668458 -104648307 + L2 LINE L2 2603 2746 -568 227 280 136 30 chr10 35668564 35668696 -104648069 + L2 LINE L2 2933 3078 -194 4374 64 4 0 chr10 35668736 35669282 -104647483 - L1PA7 LINE L1 -16 6138 5591 2339 147 26 8 chr10 35670251 35670631 -104646134 + LTR45B LTR ERV1 3 389 -100 2989 177 34 72 chr10 35670678 35671357 -104645408 + L1PB4 LINE L1 5493 6145 -11 180 0 0 0 chr10 35671358 35671378 -104645387 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2187 131 0 0 chr10 35671469 35671781 -104644984 - AluSx SINE Alu 0 312 1 333 288 58 63 chr10 35672713 35672904 -104643861 - MIR SINE MIR -67 195 6 253 322 0 0 chr10 35673471 35673530 -104643235 - L2 LINE L2 -86 3186 3128 321 288 8 68 chr10 35673685 35673803 -104642962 - L2 LINE L2 0 3313 3203 186 167 0 0 chr10 35674251 35674287 -104642478 + A-rich Low_complexity Low_complexity 2 37 0 2131 106 3 0 chr10 35674486 35674779 -104641986 + AluSp SINE Alu 2 295 -18 2247 167 83 2 chr10 35675455 35675641 -104641124 - MSTC LTR MaLR 0 428 258 2162 95 0 10 chr10 35675641 35675945 -104640820 - AluSc SINE Alu -8 301 1 2247 167 83 2 chr10 35675945 35676154 -104640611 - MSTC LTR MaLR -170 258 1 305 260 96 39 chr10 35676215 35676306 -104640459 + L2 LINE L2 3203 3302 -11 1956 118 28 0 chr10 35676306 35676594 -104640171 + AluSx SINE Alu 5 300 -12 305 260 96 39 chr10 35676594 35676606 -104640159 + L2 LINE L2 3302 3312 -1 265 285 51 51 chr10 35676712 35676849 -104639916 - MER5B DNA MER1_type 0 178 42 * 269 328 0 0 chr10 35676837 35676898 -104639867 + L2 LINE L2 3128 3188 -84 2194 107 0 7 chr10 35677518 35677827 -104638938 + AluSx SINE Alu 1 307 -5 235 227 0 30 chr10 35678072 35678138 -104638627 + GA-rich Low_complexity Low_complexity 4 67 0 25 0 0 0 chr10 35678807 35678832 -104637933 + AT_rich Low_complexity Low_complexity 1 25 0 2124 87 3 17 chr10 35679749 35680047 -104636718 + AluSq SINE Alu 1 294 -19 284 217 12 12 chr10 35680274 35680357 -104636408 - MLT1J1 LTR MaLR 0 446 364 2355 66 0 10 chr10 35680358 35680661 -104636104 + AluY SINE Alu 1 300 -11 1899 119 35 0 chr10 35680762 35681048 -104635717 - AluY SINE Alu -15 296 1 234 160 40 20 chr10 35681131 35681175 -104635590 - MLT1J2 LTR MaLR -283 167 123 982 251 103 13 chr10 35681175 35681609 -104635156 - MLT1G1 LTR MaLR -2 593 38 395 206 27 0 chr10 35682235 35682308 -104634457 - L2 LINE L2 0 3272 3198 21 36 0 0 chr10 35683381 35683409 -104633356 + AT_rich Low_complexity Low_complexity 1 28 0 2692 147 12 0 chr10 35683481 35683897 -104632868 + MSTB LTR MaLR 5 425 -1 2713 169 27 4 chr10 35684201 35684721 -104632044 + L1MB3 LINE L1 5652 6183 0 984 271 80 39 chr10 35684728 35684777 -104631988 + HAL1 LINE L1 1032 1078 -1429 2053 117 3 7 chr10 35684777 35685076 -104631689 + AluSx SINE Alu 7 304 -8 984 271 80 39 chr10 35685076 35685561 -104631204 + HAL1 LINE L1 1078 1588 -919 2050 97 7 7 chr10 35685574 35685862 -104630903 - AluSp SINE Alu -25 288 1 391 320 87 0 chr10 35686104 35686276 -104630489 - HAL1 LINE L1 -710 1797 1611 520 254 21 42 chr10 35687033 35687226 -104629539 - MER5A DNA MER1_type 0 189 1 288 304 29 0 chr10 35687515 35687584 -104629181 - L2 LINE L2 -5 3308 3238 839 163 0 0 chr10 35687608 35687737 -104629028 + FLAM_A SINE Alu 1 129 -4 895 205 96 38 chr10 35687933 35688172 -104628593 + LTR65 LTR ERV1 169 421 -248 516 315 31 44 chr10 35688341 35688662 -104628103 + MER90 LTR ERV1 294 610 -4 791 251 0 43 chr10 35688708 35688915 -104627850 + MER63A DNA MER1_type 13 210 0 649 303 34 8 chr10 35690124 35690362 -104626403 + LTR33A LTR ERVL 280 523 0 193 273 91 15 chr10 35690499 35690565 -104626200 - L2 LINE L2 -247 3025 2955 363 23 0 0 chr10 35691596 35691640 -104625125 + (TC)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr10 35693545 35693567 -104623198 + AT_rich Low_complexity Low_complexity 1 22 0 2680 58 12 85 chr10 35693997 35694295 -104622470 + L1PB1 LINE L1 5629 5954 -197 2464 40 0 13 chr10 35694295 35694599 -104622166 + AluY SINE Alu 1 300 -11 2680 58 12 85 chr10 35694599 35694784 -104621981 + L1PB1 LINE L1 5954 6151 0 756 279 36 27 chr10 35694913 35695174 -104621591 + MIR SINE MIR 1 258 -4 2220 102 0 10 chr10 35696224 35696529 -104620236 - AluSx SINE Alu -10 302 1 291 346 94 30 chr10 35696570 35696832 -104619933 - L2 LINE L2 -245 3068 2786 455 242 101 7 chr10 35696875 35697024 -104619741 - MLT1H1 LTR MaLR -1 554 392 2018 142 0 0 chr10 35697132 35697427 -104619338 - AluSx SINE Alu -17 295 1 232 326 61 20 chr10 35697594 35697692 -104619073 - L2 LINE L2 -517 2797 2696 799 172 0 0 chr10 35697795 35697917 -104618848 - FLAM_A SINE Alu -10 123 2 182 293 121 0 chr10 35698452 35698510 -104618255 - MIR SINE MIR -150 112 48 1365 165 115 4 chr10 35698510 35698771 -104617994 - AluJo SINE Alu -16 296 7 192 161 0 0 chr10 35698773 35698804 -104617961 - MIR SINE MIR -147 61 31 2202 106 0 0 chr10 35698809 35699111 -104617654 - AluSx SINE Alu -10 302 1 192 305 107 30 chr10 35699137 35699268 -104617497 - MIR SINE MIR -26 236 96 264 185 0 0 chr10 35699494 35699548 -104617217 + GA-rich Low_complexity Low_complexity 2 55 0 1793 184 0 0 chr10 35700946 35701256 -104615509 - AluJo SINE Alu -2 310 1 440 209 0 0 chr10 35701256 35701342 -104615423 - AluJb SINE Alu -171 141 56 2081 103 0 3 chr10 35702617 35702908 -104613857 - AluSg SINE Alu -20 290 1 1539 185 3 20 chr10 35702950 35703253 -104613512 - AluJo SINE Alu -14 298 1 1847 269 66 55 chr10 35703253 35704298 -104612467 - HAL1b LINE L1 -219 1129 73 2136 86 0 57 chr10 35704396 35704711 -104612054 - AluSq SINE Alu -16 297 1 668 271 129 55 chr10 35705198 35705601 -104611164 - MLT1J LTR MaLR -17 494 62 354 235 0 92 chr10 35705623 35705721 -104611044 - L1MC4 LINE L1 -1340 6702 6614 * 371 271 24 0 chr10 35705650 35705735 -104611030 + L1MC4 LINE L1 6617 6703 -1339 232 300 0 0 chr10 35705745 35705835 -104610930 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 35705835 35705868 -104610897 + (TA)n Simple_repeat Simple_repeat 1 33 0 795 188 12 18 chr10 35705874 35706039 -104610726 - FRAM SINE Alu -2 164 1 195 159 143 48 chr10 35706155 35706218 -104610547 + L2 LINE L2 3034 3102 -170 1335 161 98 42 chr10 35706661 35706947 -104609818 - AluSx SINE Alu -8 304 3 21 0 0 0 chr10 35707134 35707155 -104609610 + AT_rich Low_complexity Low_complexity 1 21 0 2750 3 0 0 chr10 35707598 35707902 -104608863 - AluYa5 SINE Alu -7 304 1 216 0 0 0 chr10 35707919 35707943 -104608822 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1070 211 13 9 chr10 35708046 35708278 -104608487 - AluJo SINE Alu -3 309 77 533 333 0 29 chr10 35708290 35708494 -104608271 - L2 LINE L2 -8 3305 3108 876 150 0 15 chr10 35709102 35709235 -104607530 + FLAM_C SINE Alu 1 131 -2 469 233 78 70 chr10 35709300 35709588 -104607177 + MLT1J2 LTR MaLR 123 449 -1 299 293 204 49 chr10 35709677 35709902 -104606863 + MIR SINE MIR 2 261 -1 22 0 0 0 chr10 35710151 35710173 -104606592 + AT_rich Low_complexity Low_complexity 1 22 0 396 186 21 41 chr10 35711379 35711476 -104605289 - MER5A DNA MER1_type -86 103 9 286 254 0 127 chr10 35711561 35711671 -104605094 + MIR SINE MIR 88 183 -79 29 47 0 0 chr10 35713638 35713681 -104603084 + AT_rich Low_complexity Low_complexity 1 43 0 208 111 67 0 chr10 35714736 35714781 -104601984 + GA-rich Low_complexity Low_complexity 2 49 0 407 264 50 14 chr10 35717483 35717564 -104599201 + MIR SINE MIR 117 207 -55 1779 164 20 3 chr10 35717564 35717862 -104598903 + AluJb SINE Alu 1 303 -9 407 264 50 14 chr10 35717862 35717920 -104598845 + MIR SINE MIR 207 261 -1 264 59 0 0 chr10 35718575 35718609 -104598156 + (CA)n Simple_repeat Simple_repeat 2 35 0 1349 176 83 47 chr10 35718795 35719096 -104597669 + AluJo SINE Alu 1 312 0 472 193 9 55 chr10 35719372 35719481 -104597284 + L2 LINE L2 3210 3313 0 2143 122 0 13 chr10 35719758 35720062 -104596703 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 35720511 35720543 -104596222 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr10 35722604 35722625 -104594140 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1610 157 0 53 chr10 35722638 35722919 -104593846 - AluJo SINE Alu -46 266 1 290 314 67 0 chr10 35724127 35724232 -104592533 + L2 LINE L2 3143 3254 -18 1640 111 13 114 chr10 35724341 35724657 -104592108 + AluJb SINE Alu 1 284 -28 243 0 0 0 chr10 35724657 35724684 -104592081 + (TA)n Simple_repeat Simple_repeat 1 27 0 193 268 0 0 chr10 35724696 35724737 -104592028 + L2 LINE L2 2717 2757 -557 226 315 63 27 chr10 35725241 35725352 -104591413 + L2 LINE L2 3153 3267 -5 321 118 0 0 chr10 35726511 35726562 -104590203 + (TG)n Simple_repeat Simple_repeat 2 52 0 1509 186 19 38 chr10 35726587 35726904 -104589861 - AluJo SINE Alu -1 311 1 354 232 90 32 chr10 35727252 35727407 -104589358 + L1MC5 LINE L1 7746 7909 -52 2129 135 0 3 chr10 35727443 35727747 -104589018 + AluSg SINE Alu 1 303 -7 276 281 11 11 chr10 35730566 35730655 -104586110 + GA-rich Low_complexity Low_complexity 4 92 0 25 0 0 0 chr10 35733669 35733694 -104583071 + AT_rich Low_complexity Low_complexity 1 25 0 969 118 34 56 chr10 35733694 35733872 -104582893 - L1MA8 LINE L1 -3 6288 6115 2420 95 0 19 chr10 35733872 35734188 -104582577 - AluSx SINE Alu -2 310 1 324 284 10 118 chr10 35734817 35734956 -104581809 + MER5A DNA MER1_type 8 120 -69 1585 154 6 77 chr10 35734956 35735114 -104581651 - AluJo SINE Alu -23 289 162 207 0 0 0 chr10 35735114 35735137 -104581628 + (TA)n Simple_repeat Simple_repeat 2 24 0 1585 154 6 77 chr10 35735137 35735289 -104581476 - AluJo SINE Alu -150 162 1 324 284 10 118 chr10 35735289 35735353 -104581412 + MER5A DNA MER1_type 120 189 0 2605 7 0 0 chr10 35739469 35739748 -104577017 - AluYb8 SINE Alu -1 317 39 2393 104 0 0 chr10 35740470 35740778 -104575987 - AluSq SINE Alu -5 308 1 205 257 83 73 chr10 35740829 35740938 -104575827 + L2 LINE L2 3162 3271 -1 3608 119 50 103 chr10 35741129 35741857 -104574908 - LTR8 LTR ERV1 -2 689 1 788 190 87 20 chr10 35742856 35743051 -104573714 + L1MB5 LINE L1 5959 6166 -8 1755 160 3 3 chr10 35743684 35743972 -104572793 - AluJb SINE Alu -24 288 1 829 168 0 0 chr10 35743973 35744098 -104572667 - AluJb SINE Alu -186 126 2 324 225 22 0 chr10 35744405 35744494 -104572271 - MIR SINE MIR -3 259 169 2311 121 0 0 chr10 35744646 35744953 -104571812 - AluSx SINE Alu -5 307 1 586 258 53 7 chr10 35745021 35745172 -104571593 - MIR SINE MIR -91 171 14 2068 125 0 0 chr10 35745221 35745510 -104571255 - AluSx SINE Alu -10 302 14 221 299 78 26 chr10 35745518 35745595 -104571170 - MIR3 SINE MIR -52 156 76 2631 144 57 2 chr10 35747986 35748423 -104568342 + L1MB2 LINE L1 5706 6166 -5 2058 129 3 3 chr10 35748423 35748717 -104568048 - AluSx SINE Alu -18 294 1 229 266 101 13 chr10 35749914 35749993 -104566772 - L2 LINE L2 -204 3068 2983 1353 139 12 141 chr10 35750412 35750789 -104565976 + L1MB3 LINE L1 5857 6183 0 188 261 43 0 chr10 35751511 35751557 -104565208 + L2 LINE L2 2713 2760 -554 2464 58 10 0 chr10 35751872 35752180 -104564585 - AluY SINE Alu 0 311 1 1693 164 41 7 chr10 35752196 35752488 -104564277 - AluJo SINE Alu -10 302 1 252 311 57 8 chr10 35752535 35752657 -104564108 + L2 LINE L2 3185 3312 -1 1013 144 16 57 chr10 35753320 35753514 -104563251 + MER53 DNA DNA 3 188 -1 2403 92 0 22 chr10 35754074 35754391 -104562374 - AluY SINE Alu -1 310 1 275 345 115 0 chr10 35754605 35754718 -104562047 - L2 LINE L2 -1 3271 3146 215 309 152 31 chr10 35754914 35755105 -104561660 - MIR SINE MIR -12 250 37 2252 108 0 16 chr10 35756360 35756676 -104560089 + AluSx SINE Alu 1 311 -1 1460 179 79 10 chr10 35756695 35756986 -104559779 + AluJo SINE Alu 1 311 -1 355 282 114 23 chr10 35756997 35757128 -104559637 - L2 LINE L2 -2 3311 3169 * 512 285 41 27 chr10 35757124 35757345 -104559420 - MIR SINE MIR -21 241 18 1808 120 0 15 chr10 35758245 35758545 -104558220 - AluSx SINE Alu 0 322 27 1755 163 0 24 chr10 35759085 35759374 -104557391 + AluJo SINE Alu 1 282 -30 1946 123 18 3 chr10 35760300 35760584 -104556181 - L1PA11 LINE L1 0 6174 5887 2781 118 106 34 chr10 35762226 35762805 -104553960 + MER4B LTR ERV1 1 779 0 390 300 0 0 chr10 35763582 35763672 -104553093 + MIR3 SINE MIR 111 200 -8 21 82 0 0 chr10 35763801 35763850 -104552915 + AT_rich Low_complexity Low_complexity 1 49 0 879 152 0 26 chr10 35763971 35764163 -104552602 + AluSg/x SINE Alu 134 321 0 25 83 0 0 chr10 35764570 35764630 -104552135 + AT_rich Low_complexity Low_complexity 1 60 0 794 185 32 37 chr10 35764785 35764974 -104551791 + MER53 DNA DNA 2 189 0 1425 201 60 104 chr10 35766061 35766344 -104550421 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 35766344 35766389 -104550376 + (TG)n Simple_repeat Simple_repeat 2 46 0 1425 201 60 104 chr10 35766389 35766672 -104550093 + MER34 LTR ERV1 248 542 0 2249 108 3 16 chr10 35768379 35768694 -104548071 - AluSx SINE Alu -1 311 1 430 316 82 37 chr10 35769872 35770116 -104546649 - MIR SINE MIR -2 260 6 183 354 0 0 chr10 35772577 35772625 -104544140 - L2 LINE L2 -15 3257 3210 * 209 304 183 35 chr10 35772596 35772711 -104544054 - MIR SINE MIR -28 234 103 300 111 0 0 chr10 35773219 35773264 -104543501 + (CA)n Simple_repeat Simple_repeat 2 46 0 1622 149 100 0 chr10 35773317 35773598 -104543167 - AluSx SINE Alu -3 309 1 180 158 0 0 chr10 35773679 35773717 -104543048 + (CA)n Simple_repeat Simple_repeat 2 39 0 262 360 81 12 chr10 35774383 35774544 -104542221 + MIR SINE MIR 8 179 -83 285 29 0 0 chr10 35774652 35774686 -104542079 + (TG)n Simple_repeat Simple_repeat 1 34 0 2086 124 10 0 chr10 35774755 35775046 -104541719 + AluJb SINE Alu 1 294 -18 248 222 0 0 chr10 35775085 35775130 -104541635 + L2 LINE L2 3220 3264 -8 192 40 0 0 chr10 35775936 35775961 -104540804 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr10 35777389 35777410 -104539355 + (TGG)n Simple_repeat Simple_repeat 3 23 0 216 333 0 13 chr10 35779126 35779204 -104537561 - L3 LINE CR1 -1 1576 1500 227 186 23 0 chr10 35779629 35779672 -104537093 + GA-rich Low_complexity Low_complexity 4 47 0 288 0 0 0 chr10 35779680 35779712 -104537053 + (TG)n Simple_repeat Simple_repeat 1 32 0 789 263 9 31 chr10 35780979 35781203 -104535562 + MER20 DNA MER1_type 1 219 0 356 308 133 14 chr10 35781377 35781520 -104535245 + MIR3 SINE MIR 28 187 -21 243 0 0 0 chr10 35782330 35782357 -104534408 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 268 73 49 chr10 35783627 35783750 -104533015 + MIR SINE MIR 87 212 -50 2246 99 0 7 chr10 35783752 35784045 -104532720 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 35784831 35784855 -104531910 + (T)n Simple_repeat Simple_repeat 1 24 0 418 279 117 11 chr10 35786374 35786553 -104530212 + MIR SINE MIR 34 231 -31 598 279 77 31 chr10 35786606 35786764 -104530001 + MLT1I LTR MaLR 37 186 -223 1983 116 54 85 chr10 35786764 35787151 -104529614 + THE1C LTR MaLR 1 375 0 598 279 77 31 chr10 35787151 35787279 -104529486 + MLT1I LTR MaLR 186 336 -73 3929 146 101 17 chr10 35787631 35788355 -104528410 + LTR1 LTR ERV1 1 785 0 28 48 0 0 chr10 35790294 35790336 -104526429 + AT_rich Low_complexity Low_complexity 1 42 0 1658 192 13 0 chr10 35791189 35791497 -104525268 - AluJo SINE Alu 0 312 1 2038 110 45 3 chr10 35793101 35793391 -104523374 + AluSx SINE Alu 1 302 -10 1708 167 0 32 chr10 35795599 35795910 -104520855 - AluJo SINE Alu -11 301 1 234 0 0 0 chr10 35796732 35796758 -104520007 + (A)n Simple_repeat Simple_repeat 1 26 0 2057 136 3 3 chr10 35797480 35797782 -104518983 - AluSx SINE Alu -10 302 1 785 215 32 148 chr10 35798073 35798167 -104518598 + L2 LINE L2 2960 3063 -250 2356 99 0 0 chr10 35798167 35798469 -104518296 + AluSq SINE Alu 1 302 -11 785 215 32 148 chr10 35798469 35798774 -104517991 + L2 LINE L2 3063 3313 0 299 255 47 19 chr10 35798952 35799058 -104517707 + MIR3 SINE MIR 98 206 -2 398 302 104 16 chr10 35799071 35799253 -104517512 + MIR3 SINE MIR 8 205 -3 2108 88 0 31 chr10 35800569 35800902 -104515863 + AluSx SINE Alu 1 324 0 414 297 32 60 chr10 35802058 35802243 -104514522 + MIR3 SINE MIR 24 203 -5 2869 100 12 21 chr10 35802383 35802578 -104514187 + MSTA LTR MaLR 1 196 -232 1881 62 0 0 chr10 35802578 35802804 -104513961 + AluY SINE Alu 82 307 -4 2869 100 12 21 chr10 35802804 35803029 -104513736 + MSTA LTR MaLR 196 417 -11 496 293 93 18 chr10 35805408 35805633 -104511132 - MLT1K LTR MaLR -15 573 332 2526 171 20 34 chr10 35805997 35806437 -104510328 - Tigger2a DNA MER2_type 0 434 1 209 157 0 39 chr10 35806451 35806502 -104510263 + T-rich Low_complexity Low_complexity 2 50 0 2071 131 3 3 chr10 35806624 35806921 -104509844 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 35807545 35807566 -104509199 + AT_rich Low_complexity Low_complexity 1 21 0 239 322 99 47 chr10 35807639 35807707 -104509058 + MIR3 SINE MIR 23 86 -122 4622 171 52 40 chr10 35807707 35808598 -104508167 + MER54A LTR ERVL 1 901 0 239 322 99 47 chr10 35808598 35808700 -104508065 + MIR3 SINE MIR 86 202 -6 1868 116 0 4 chr10 35811577 35811828 -104504937 + AluSc SINE Alu 46 295 -14 526 290 97 6 chr10 35813205 35813381 -104503384 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 35813593 35813683 -104503082 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 35813958 35814010 -104502755 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 351 50 50 chr10 35814164 35814423 -104502342 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 35814538 35814686 -104502079 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 35815269 35815292 -104501473 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 35816235 35816486 -104500279 + MER46C DNA MER2_type 80 337 -1 2398 314 149 36 chr10 35816524 35817296 -104499469 + L2 LINE L2 839 1523 -1790 1565 188 20 14 chr10 35817296 35817589 -104499176 + AluJo SINE Alu 1 295 -17 2398 314 149 36 chr10 35817589 35818787 -104497978 + L2 LINE L2 1523 3039 -274 236 340 7 49 chr10 35818886 35819030 -104497735 + L2 LINE L2 2550 2687 -627 2248 106 3 0 chr10 35819074 35819376 -104497389 - AluSc SINE Alu -6 303 1 303 300 8 33 chr10 35819510 35819630 -104497135 + L2 LINE L2 2938 3054 -218 696 246 126 15 chr10 35819787 35819986 -104496779 + MIR SINE MIR 29 249 -13 2312 123 13 60 chr10 35820285 35820518 -104496247 + THE1B LTR MaLR 1 211 -153 1942 118 42 14 chr10 35820518 35820807 -104495958 - AluSx SINE Alu -13 299 3 2312 123 13 60 chr10 35820807 35820955 -104495810 + THE1B LTR MaLR 211 364 0 849 203 79 11 chr10 35821217 35821394 -104495371 + MER5A DNA MER1_type 1 189 0 212 59 29 0 chr10 35821611 35821645 -104495120 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1231 191 0 9 chr10 35821653 35821873 -104494892 - AluJo SINE Alu -24 288 71 2768 86 31 17 chr10 35822719 35823078 -104493687 - THE1B LTR MaLR 0 364 1 201 324 54 9 chr10 35823346 35823457 -104493308 + L2 LINE L2 1552 1667 -1647 1204 207 93 77 chr10 35823495 35823761 -104493004 - MLT1B LTR MaLR -7 383 108 2006 139 7 0 chr10 35823761 35824056 -104492709 - AluSx SINE Alu -14 298 2 1204 207 93 77 chr10 35824056 35824166 -104492599 - MLT1B LTR MaLR -282 108 1 1141 216 22 48 chr10 35824241 35824556 -104492209 - MLT1A1 LTR MaLR 0 365 59 22 0 0 0 chr10 35825099 35825121 -104491644 + AT_rich Low_complexity Low_complexity 1 22 0 2771 127 39 10 chr10 35825141 35825557 -104491208 + MSTA LTR MaLR 1 428 0 186 68 0 68 chr10 35825750 35825794 -104490971 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 21 36 0 0 chr10 35825933 35825961 -104490804 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr10 35826502 35826529 -104490236 + (TC)n Simple_repeat Simple_repeat 2 28 0 225 333 14 0 chr10 35827464 35827533 -104489232 + MIR SINE MIR 83 152 -56 544 296 143 12 chr10 35827791 35828197 -104488568 - L1MC4a LINE L1 -1805 6003 5545 489 232 190 45 chr10 35828395 35828753 -104488012 + MLT1J1 LTR MaLR 18 427 -19 200 347 121 16 chr10 35828774 35828964 -104487801 + L2 LINE L2 2587 2796 -518 3675 115 46 3 chr10 35829114 35829681 -104487084 + LTR26 LTR ERV1 13 603 0 384 289 47 34 chr10 35829893 35830042 -104486723 - MIR3 SINE MIR -12 196 46 252 271 71 35 chr10 35831149 35831234 -104485531 - L2 LINE L2 -50 3263 3176 186 71 0 0 chr10 35831434 35831462 -104485303 + (GGCTG)n Simple_repeat Simple_repeat 3 30 0 1290 249 158 13 chr10 35831679 35832328 -104484437 - L2 LINE L2 -172 3141 2411 209 370 87 0 chr10 35832415 35832507 -104484258 - MIR3 SINE MIR -11 197 98 2210 91 0 0 chr10 35832527 35832802 -104483963 + AluY SINE Alu 23 297 -14 1274 192 30 0 chr10 35832808 35833042 -104483723 - MSTB LTR MaLR -2 424 184 1768 128 77 36 chr10 35833210 35833547 -104483218 - THE1C LTR MaLR 0 375 25 453 56 0 0 chr10 35833548 35833602 -104483163 - THE1C LTR MaLR -317 58 5 1491 194 121 35 chr10 35833649 35834045 -104482720 - MSTB1 LTR MaLR 0 432 3 241 239 70 14 chr10 35834621 35834692 -104482073 - MIR SINE MIR -1 261 187 250 341 11 11 chr10 35834750 35834838 -104481927 + MIR SINE MIR 60 147 -115 2062 141 3 3 chr10 35835056 35835361 -104481404 - AluSq SINE Alu -8 305 1 2497 127 82 20 chr10 35835581 35835984 -104480781 - MSTC LTR MaLR 0 428 1 2036 116 18 0 chr10 35836218 35836502 -104480263 - AluSg SINE Alu -9 301 13 1799 158 41 7 chr10 35836971 35837287 -104479478 + AluSx SINE Alu 1 312 0 28 29 0 0 chr10 35838398 35838433 -104478332 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr10 35838750 35838774 -104477991 + AT_rich Low_complexity Low_complexity 1 24 0 1324 156 49 0 chr10 35838848 35839073 -104477692 - MER46A DNA MER2_type 0 236 1 193 328 69 0 chr10 35839343 35839401 -104477364 + MIR SINE MIR 50 111 -151 200 270 63 72 chr10 35839979 35840090 -104476675 + MIR SINE MIR 25 134 -128 217 276 26 40 chr10 35840568 35840644 -104476121 - MIR3 SINE MIR -51 157 83 1547 160 51 24 chr10 35841024 35841317 -104475448 - AluJo SINE Alu -11 301 1 1878 111 0 4 chr10 35841954 35842215 -104474550 - AluSx SINE Alu 0 312 53 436 254 81 41 chr10 35842224 35842421 -104474344 - MIR SINE MIR -12 250 46 21 57 0 0 chr10 35842551 35842586 -104474179 + AT_rich Low_complexity Low_complexity 1 35 0 328 307 79 7 chr10 35842935 35843075 -104473690 - L2 LINE L2 -4 3309 3160 2345 135 39 36 chr10 35847485 35847848 -104468917 - THE1B LTR MaLR 0 364 1 323 376 7 7 chr10 35848271 35848420 -104468345 + MIR3 SINE MIR 57 205 -3 195 174 22 43 chr10 35848565 35848611 -104468154 - L2 LINE L2 -23 3249 3205 208 279 302 0 chr10 35849515 35849644 -104467121 + MIR3 SINE MIR 36 203 -5 2389 89 0 6 chr10 35849689 35850004 -104466761 - AluSq SINE Alu 0 313 1 207 171 0 0 chr10 35850289 35850324 -104466441 + T-rich Low_complexity Low_complexity 3 37 0 2566 74 0 0 chr10 35850614 35850953 -104465812 - AluY SINE Alu 0 339 1 1629 180 14 11 chr10 35850990 35851274 -104465491 - AluJo SINE Alu -27 285 1 911 156 24 30 chr10 35852129 35852296 -104464469 - AluJo SINE Alu -26 286 121 3736 143 8 4 chr10 35852400 35852923 -104463842 + MER1A DNA MER1_type 3 527 0 2210 121 0 0 chr10 35853151 35853449 -104463316 - AluSx SINE Alu -14 298 1 400 84 14 28 chr10 35855311 35855382 -104461383 + (GGA)n Simple_repeat Simple_repeat 3 72 0 21 0 0 0 chr10 35857039 35857060 -104459705 + AT_rich Low_complexity Low_complexity 1 21 0 973 106 0 0 chr10 35857117 35857249 -104459516 + AluSc SINE Alu 165 296 -13 2111 118 7 3 chr10 35857907 35858204 -104458561 - AluSg SINE Alu -12 298 1 1575 175 9 47 chr10 35859282 35859602 -104457163 - AluJo SINE Alu -4 308 1 663 164 18 18 chr10 35860009 35860119 -104456646 + FLAM_C SINE Alu 2 111 -32 24 53 0 0 chr10 35860133 35860171 -104456594 + AT_rich Low_complexity Low_complexity 1 38 0 1933 97 38 17 chr10 35861563 35861851 -104454914 - AluSq SINE Alu -19 294 1 257 233 0 0 chr10 35861861 35861921 -104454844 - L1ME3A LINE L1 -201 5969 5910 * 541 289 75 16 chr10 35861920 35862107 -104454658 + L1ME3A LINE L1 5963 6160 -10 535 154 100 9 chr10 35862227 35862337 -104454428 - MER96B DNA MER1_type? -23 394 275 461 181 123 26 chr10 35862228 35862383 -104454382 + MER96B DNA MER1_type? 25 194 -223 * 27 62 0 0 chr10 35863848 35863896 -104452869 + AT_rich Low_complexity Low_complexity 1 48 0 1041 233 0 23 chr10 35865536 35865751 -104451014 - MER63A DNA MER1_type 0 210 1 189 107 0 0 chr10 35867316 35867344 -104449421 + (A)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 35869722 35869742 -104447023 + (TG)n Simple_repeat Simple_repeat 2 21 0 216 0 0 0 chr10 35871512 35871536 -104445229 + (A)n Simple_repeat Simple_repeat 1 24 0 329 310 44 74 chr10 35872003 35872232 -104444533 + L1M2 LINE L1 1030 1251 -5598 32 26 0 0 chr10 35875661 35875700 -104441065 + AT_rich Low_complexity Low_complexity 1 39 0 1132 321 110 45 chr10 35875775 35876768 -104439997 - L2 LINE L2 -618 2696 1640 706 186 192 55 chr10 35877910 35877950 -104438815 + L1ME4a LINE L1 5789 5822 -299 2120 105 0 26 chr10 35877950 35878255 -104438510 + AluY SINE Alu 15 311 0 1493 157 33 74 chr10 35878265 35878564 -104438201 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 35878567 35878600 -104438165 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 706 186 192 55 chr10 35878600 35878835 -104437930 + L1ME4a LINE L1 5830 6119 -2 200 255 0 20 chr10 35879123 35879174 -104437591 - MIR SINE MIR -57 205 156 1363 137 4 57 chr10 35879536 35879784 -104436981 + AluJo SINE Alu 76 310 -2 222 118 0 0 chr10 35880503 35880537 -104436228 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2539 211 93 5 chr10 35881804 35882372 -104434393 - MLT1E3 LTR MaLR -5 619 2 1688 153 42 0 chr10 35883352 35883613 -104433152 + AluJb SINE Alu 4 275 -37 587 213 99 50 chr10 35883737 35883958 -104432807 - L1ME LINE L1 -672 5492 5261 266 159 14 43 chr10 35884020 35884089 -104432676 - L1ME LINE L1 -896 5250 5184 2375 96 3 0 chr10 35884143 35884446 -104432319 - AluSx SINE Alu -8 304 1 363 277 68 27 chr10 35884724 35884872 -104431893 + MIR SINE MIR 59 212 -50 2116 132 0 3 chr10 35885842 35886137 -104430628 - AluSg SINE Alu -13 297 4 396 226 83 15 chr10 35887797 35887930 -104428835 - MER103 DNA DNA -17 149 8 192 356 44 0 chr10 35888417 35888507 -104428258 - MIR SINE MIR -65 143 50 1741 122 37 24 chr10 35888653 35888981 -104427784 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 35890107 35890128 -104426637 + AT_rich Low_complexity Low_complexity 1 21 0 2018 156 6 3 chr10 35891383 35891698 -104425067 - 7SLRNA srpRNA srpRNA -4 316 1 23 0 0 0 chr10 35893445 35893468 -104423297 + AT_rich Low_complexity Low_complexity 1 23 0 278 262 43 116 chr10 35894874 35894990 -104421775 - MIR3 SINE MIR -23 185 83 1802 176 26 0 chr10 35894990 35895292 -104421473 - AluJb SINE Alu -2 310 1 278 262 43 116 chr10 35895292 35895339 -104421426 - MIR3 SINE MIR -125 83 34 196 308 17 108 chr10 35895772 35895811 -104420954 - L3b LINE CR1 -101 1482 1441 2235 99 7 0 chr10 35895811 35896095 -104420670 + AluSx SINE Alu 10 295 -17 196 308 17 108 chr10 35896095 35896175 -104420590 - L3b LINE CR1 -142 1441 1374 291 383 0 21 chr10 35896579 35896720 -104420045 - MIR3 SINE MIR -30 178 41 2313 83 7 3 chr10 35897432 35897732 -104419033 + AluSp SINE Alu 1 301 -12 449 195 23 0 chr10 35897862 35897949 -104418816 + MIR3 SINE MIR 89 177 -31 1811 170 3 3 chr10 35898522 35898816 -104417949 + AluJo SINE Alu 1 294 -18 1771 132 0 0 chr10 35899843 35900086 -104416679 + AluSx SINE Alu 1 243 -69 2278 112 0 3 chr10 35900500 35900804 -104415961 + AluSx SINE Alu 1 303 -9 339 316 101 0 chr10 35901742 35901881 -104414884 + MIR SINE MIR 36 188 -74 490 276 112 30 chr10 35902042 35902274 -104414491 - MIR SINE MIR -5 257 7 1796 148 0 24 chr10 35902597 35902895 -104413870 + AluJo SINE Alu 5 295 -17 622 91 10 20 chr10 35903646 35903745 -104413020 + MER4A LTR ERV1 1 98 -566 1849 101 186 80 chr10 35903745 35904110 -104412655 + MER4A LTR ERV1 261 664 0 189 175 0 0 chr10 35905094 35905134 -104411631 + GA-rich Low_complexity Low_complexity 2 41 0 219 358 41 41 chr10 35906881 35907004 -104409761 + L2 LINE L2 3123 3245 -27 241 312 13 13 chr10 35907867 35907944 -104408821 - L3 LINE CR1 -87 1490 1414 273 261 0 15 chr10 35908431 35908496 -104408269 - L3 LINE CR1 -231 1346 1283 181 317 37 73 chr10 35908652 35908734 -104408031 + MIR3 SINE MIR 78 156 -52 2340 94 7 0 chr10 35908862 35909161 -104407604 - AluSg SINE Alu -9 301 1 279 0 0 0 chr10 35909452 35909483 -104407282 + (TG)n Simple_repeat Simple_repeat 1 31 0 1230 225 9 0 chr10 35910336 35910558 -104406207 + MER58A DNA MER1_type 1 224 0 525 269 26 52 chr10 35910663 35910856 -104405909 + L1ME LINE L1 5563 5750 -371 3815 138 14 4 chr10 35910909 35911469 -104405296 + L1PA15 LINE L1 5587 6152 -13 242 56 28 0 chr10 35911470 35911506 -104405259 + (TA)n Simple_repeat Simple_repeat 1 37 0 2083 128 0 7 chr10 35911589 35911885 -104404880 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 35911948 35911969 -104404796 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr10 35912139 35912186 -104404579 + AT_rich Low_complexity Low_complexity 1 47 0 266 310 152 0 chr10 35912214 35912385 -104404380 - MER117 DNA MER1_type 0 197 1 2561 37 0 7 chr10 35913047 35913345 -104403420 - AluY SINE Alu -15 296 1 2416 96 0 0 chr10 35913345 35913647 -104403118 - AluSx SINE Alu -10 302 1 389 197 0 134 chr10 35914570 35914712 -104402053 + L2 LINE L2 3191 3313 0 27 0 0 0 chr10 35915247 35915274 -104401491 + AT_rich Low_complexity Low_complexity 1 27 0 533 118 24 0 chr10 35916522 35916607 -104400158 + L1MA3 LINE L1 6218 6304 -1 264 300 70 0 chr10 35916713 35916813 -104399952 - MIR3 SINE MIR -54 154 48 512 211 6 25 chr10 35917031 35917192 -104399573 + CT-rich Low_complexity Low_complexity 3 160 0 1478 193 36 11 chr10 35917194 35917474 -104399291 - AluJo SINE Alu -24 288 2 223 163 0 0 chr10 35920052 35920095 -104396670 + GA-rich Low_complexity Low_complexity 2 44 0 2253 91 3 23 chr10 35972453 35972760 -104344005 + AluY SINE Alu 1 301 -10 1970 142 0 35 chr10 35973991 35974302 -104342463 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr10 35975424 35975449 -104341316 + AT_rich Low_complexity Low_complexity 1 25 0 2017 221 71 44 chr10 35977673 35978239 -104338526 + MLT1G LTR MaLR 10 590 0 2375 96 0 0 chr10 35978909 35979211 -104337554 + AluSx SINE Alu 1 302 -10 196 28 83 0 chr10 35979288 35979324 -104337441 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 227 154 0 0 chr10 35981548 35981587 -104335178 + L2 LINE L2 3261 3299 -14 207 100 0 0 chr10 35981881 35981911 -104334854 + (CA)n Simple_repeat Simple_repeat 2 31 0 898 229 85 38 chr10 35984696 35985035 -104331730 + MLT1E LTR MaLR 305 593 0 264 358 91 12 chr10 35985871 35986036 -104330729 - L3b LINE CR1 -23 1560 1383 261 316 61 9 chr10 35986106 35986220 -104330545 - L3b LINE CR1 -362 1221 1102 1930 113 20 40 chr10 35986560 35986862 -104329903 + AluSc SINE Alu 1 296 -13 1141 155 120 43 chr10 35986931 35987189 -104329576 - AluJo SINE Alu -21 291 14 291 114 0 0 chr10 35987526 35987570 -104329195 + (TG)n Simple_repeat Simple_repeat 2 45 0 1582 287 126 42 chr10 35988190 35989226 -104327539 + L2 LINE L2 1734 2855 -459 251 269 0 15 chr10 35989331 35989398 -104327367 + MLT1I LTR MaLR 344 409 0 337 346 28 33 chr10 35989413 35989595 -104327170 - L2 LINE L2 0 3313 3133 696 237 178 39 chr10 35990292 35990702 -104326063 - L1ME3A LINE L1 -49 6121 5655 368 274 17 46 chr10 35990750 35990924 -104325841 - L1ME3A LINE L1 -678 5486 5318 278 308 30 56 chr10 35990953 35991151 -104325614 + HAL1 LINE L1 1482 1674 -833 463 296 100 27 chr10 35991393 35991882 -104324883 + L1M4 LINE L1 4426 4950 -1196 989 173 0 22 chr10 35991991 35992170 -104324595 - FRAM SINE Alu -8 168 1 1714 167 11 3 chr10 35992174 35992631 -104324134 - AluJo SINE Alu 0 459 1 364 339 46 0 chr10 35992636 35992766 -104323999 - L2 LINE L2 -541 2773 2638 928 251 99 94 chr10 35992783 35993284 -104323481 + HAL1b LINE L1 392 889 -459 2228 107 0 7 chr10 35993284 35993592 -104323173 + AluSc SINE Alu 1 306 -3 928 251 99 94 chr10 35993592 35993611 -104323154 + HAL1b LINE L1 889 906 -442 2363 105 0 0 chr10 35993611 35993924 -104322841 + AluSq SINE Alu 1 313 0 928 251 99 94 chr10 35993924 35994118 -104322647 + HAL1b LINE L1 906 1111 -237 234 233 44 56 chr10 35994146 35994236 -104322529 - L1MC4 LINE L1 -1340 6702 6614 260 247 39 0 chr10 35994433 35994510 -104322255 + MIR SINE MIR 175 254 -8 1427 203 73 60 chr10 35994872 35995257 -104321508 - MLT1B LTR MaLR 0 390 1 1760 148 7 36 chr10 35995324 35995627 -104321138 - AluJo SINE Alu -18 294 1 2089 146 0 0 chr10 35995633 35995934 -104320831 - AluSq SINE Alu -12 301 1 2106 113 0 7 chr10 35996433 35996724 -104320041 + AluSx SINE Alu 1 289 -23 21 57 0 0 chr10 35997283 35997318 -104319447 + AT_rich Low_complexity Low_complexity 1 35 0 259 216 27 0 chr10 35998648 35998722 -104318043 + (TA)n Simple_repeat Simple_repeat 1 76 0 34 79 0 0 chr10 35998779 35998855 -104317910 + AT_rich Low_complexity Low_complexity 1 76 0 363 317 56 21 chr10 36000196 36000338 -104316427 - MIR3 SINE MIR -61 147 1 2183 133 0 3 chr10 36000485 36000794 -104315971 + AluSx SINE Alu 1 308 -4 211 263 35 0 chr10 36000924 36000981 -104315784 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 252 0 0 0 chr10 36002440 36002468 -104314297 + (T)n Simple_repeat Simple_repeat 1 28 0 225 162 44 0 chr10 36003251 36003319 -104313446 + (TA)n Simple_repeat Simple_repeat 1 71 0 952 199 256 59 chr10 36004201 36004258 -104312507 + L1MEc LINE L1 37 81 -6315 2014 189 25 17 chr10 36004258 36004618 -104312147 - MLT1A1 LTR MaLR 0 365 3 952 199 256 59 chr10 36004618 36004824 -104311941 + L1MEc LINE L1 81 245 -6151 285 29 0 0 chr10 36004824 36004858 -104311907 + (GA)n Simple_repeat Simple_repeat 1 34 0 952 199 256 59 chr10 36004858 36004984 -104311781 + L1MEc LINE L1 245 504 -5892 828 222 41 110 chr10 36004974 36005393 -104311372 + L1MEc LINE L1 2113 2502 -3894 * 734 239 17 0 chr10 36005393 36005569 -104311196 + L1MEc LINE L1 2764 2942 -3273 377 244 33 0 chr10 36005568 36005658 -104311107 + L1MEc LINE L1 3532 3624 -2591 * 1214 339 121 36 chr10 36007681 36008185 -104308580 - L2 LINE L2 -72 3200 2740 1735 162 10 10 chr10 36008185 36008475 -104308290 + AluJo SINE Alu 1 290 -22 1214 339 121 36 chr10 36008475 36009343 -104307422 - L2 LINE L2 -532 2740 1720 470 162 5 49 chr10 36010092 36010277 -104306488 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 210 25 49 chr10 36010279 36010360 -104306405 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 557 135 13 46 chr10 36010360 36010601 -104306164 + (TG)n Simple_repeat Simple_repeat 1 232 0 225 0 0 0 chr10 36011703 36011728 -104305037 + (TG)n Simple_repeat Simple_repeat 2 26 0 183 222 0 0 chr10 36014335 36014380 -104302385 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr10 36014995 36015018 -104301747 + (TG)n Simple_repeat Simple_repeat 1 23 0 183 80 0 0 chr10 36018098 36018123 -104298642 + (C)n Simple_repeat Simple_repeat 1 25 0 207 182 0 0 chr10 36018292 36018336 -104298429 + (TCTCTG)n Simple_repeat Simple_repeat 6 49 0 209 267 0 0 chr10 36019111 36019156 -104297609 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 332 380 0 0 chr10 36023895 36024024 -104292741 + (CGG)n Simple_repeat Simple_repeat 1 129 0 477 0 0 0 chr10 36025039 36025092 -104291673 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 62 31 0 chr10 36025898 36025930 -104290835 + (TG)n Simple_repeat Simple_repeat 2 34 0 366 115 0 0 chr10 36026107 36026168 -104290597 + (TG)n Simple_repeat Simple_repeat 1 61 0 195 139 0 0 chr10 36033148 36033184 -104283581 + (CCG)n Simple_repeat Simple_repeat 3 38 0 249 281 16 33 chr10 36033511 36033632 -104283133 + (CGG)n Simple_repeat Simple_repeat 1 119 0 249 159 0 0 chr10 36034607 36034651 -104282114 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 36035400 36035424 -104281341 + (CA)n Simple_repeat Simple_repeat 1 24 0 477 0 0 0 chr10 36040614 36040667 -104276098 + (TG)n Simple_repeat Simple_repeat 1 53 0 183 167 0 0 chr10 36041021 36041063 -104275702 + CT-rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr10 36041415 36041445 -104275320 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 426 85 0 0 chr10 36042987 36043046 -104273719 + (TG)n Simple_repeat Simple_repeat 1 59 0 246 174 0 0 chr10 36043774 36043820 -104272945 + (CA)n Simple_repeat Simple_repeat 1 46 0 396 71 0 0 chr10 36045278 36045334 -104271431 + (TG)n Simple_repeat Simple_repeat 1 56 0 303 327 106 72 chr10 36045880 36046296 -104270469 - L1 LINE L1 -1498 5350 4921 726 69 46 0 chr10 36047463 36047594 -104269171 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 5050 133 11 0 chr10 36048732 36049599 -104267166 - L1PA16 LINE L1 -9 6157 5281 1715 162 4 0 chr10 36049601 36049867 -104266898 - AluJo SINE Alu -45 267 1 2448 90 0 0 chr10 36050185 36050497 -104266268 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 36051298 36051328 -104265437 + AT_rich Low_complexity Low_complexity 1 30 0 1933 116 0 0 chr10 36052537 36052812 -104263953 - AluSq SINE Alu 0 313 39 3314 77 27 0 chr10 36052857 36053298 -104263467 + L1PA10 LINE L1 5705 6157 -11 1716 185 0 7 chr10 36053853 36054155 -104262610 - AluJo SINE Alu -12 300 1 323 306 59 43 chr10 36054190 36054582 -104262183 - L1MEc LINE L1 -3639 3209 2812 23 33 0 0 chr10 36054714 36054744 -104262021 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr10 36054888 36054914 -104261851 + (A)n Simple_repeat Simple_repeat 1 26 0 415 308 227 10 chr10 36054933 36055275 -104261490 - L1MEc LINE L1 -846 2363 2028 245 283 54 0 chr10 36055302 36055394 -104261371 - L1MEc LINE L1 -4956 1882 1786 649 23 23 0 chr10 36055394 36055481 -104261284 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 1253 196 92 0 chr10 36055484 36055734 -104261031 - AluJo SINE Alu -31 281 9 503 350 110 55 chr10 36055759 36056213 -104260552 - L1 LINE L1 -4778 2071 1593 741 190 0 15 chr10 36056812 36056949 -104259816 + AluJo SINE Alu 1 135 -177 2271 113 18 82 chr10 36057378 36057767 -104258998 - THE1B LTR MaLR 0 364 1 2312 181 73 23 chr10 36059301 36059782 -104256983 + MLT1D LTR MaLR 1 505 0 226 369 19 0 chr10 36059829 36059932 -104256833 - L3 LINE CR1 -6 1571 1467 210 319 42 0 chr10 36060079 36060151 -104256614 + MIR SINE MIR 115 189 -73 431 338 36 18 chr10 36060209 36060434 -104256331 - L3 LINE CR1 -203 1374 1146 302 196 0 18 chr10 36060733 36060789 -104255976 - L1MC4 LINE L1 -1339 6703 6649 1387 165 132 0 chr10 36060789 36061031 -104255734 + AluJo SINE Alu 1 274 -38 216 0 0 0 chr10 36061054 36061078 -104255687 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 212 363 94 44 chr10 36061353 36061714 -104255051 + L2 LINE L2 2930 3308 -5 1927 132 11 0 chr10 36062408 36062688 -104254077 + AluSx SINE Alu 7 289 -23 3571 219 29 8 chr10 36063544 36064419 -104252346 + L1MD2 LINE L1 5305 6197 -162 1624 152 16 4 chr10 36064433 36064690 -104252075 + AluJb SINE Alu 23 282 -30 242 56 28 0 chr10 36064690 36064726 -104252039 + (TC)n Simple_repeat Simple_repeat 2 38 0 255 239 28 21 chr10 36064727 36064869 -104251896 + (TA)n Simple_repeat Simple_repeat 2 144 0 197 125 0 21 chr10 36064899 36064947 -104251818 + (TA)n Simple_repeat Simple_repeat 1 47 0 597 186 83 0 chr10 36064950 36065095 -104251670 + L1MD2 LINE L1 6193 6349 -10 917 236 17 43 chr10 36065133 36065399 -104251366 + MLT2B1 LTR ERVL 177 476 -44 949 266 73 40 chr10 36065438 36065810 -104250955 + MLT1H LTR MaLR 128 511 -38 1403 200 70 0 chr10 36066072 36066372 -104250393 + L1MB7 LINE L1 5864 6184 0 375 191 67 48 chr10 36066464 36066569 -104250196 + MLT1H-int LTR MaLR 433 539 -832 285 225 17 146 chr10 36067247 36067425 -104249340 + MLT1H-int LTR MaLR 1375 1529 -206 1572 252 104 9 chr10 36067605 36068066 -104248699 + MLT1H LTR MaLR 45 549 0 823 267 51 0 chr10 36068066 36068302 -104248463 - MIR SINE MIR -4 258 11 866 286 136 13 chr10 36068739 36069130 -104247635 - MLT1J LTR MaLR -2 509 71 1754 113 8 0 chr10 36069143 36069383 -104247382 + AluSc SINE Alu 64 305 -4 910 150 60 0 chr10 36069402 36069535 -104247230 + AluJo SINE Alu 11 151 -161 322 355 16 16 chr10 36069561 36069685 -104247080 - MIR SINE MIR -118 144 21 1744 257 93 27 chr10 36070470 36071300 -104245465 + MER45C DNA AcHobo 2 940 -13 471 157 0 0 chr10 36072420 36072509 -104244256 + (CA)n Simple_repeat Simple_repeat 2 90 0 281 132 0 19 chr10 36072977 36073030 -104243735 + (TG)n Simple_repeat Simple_repeat 2 53 0 213 94 0 0 chr10 36073480 36073512 -104243253 + (CA)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 36073916 36073941 -104242824 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 121 0 0 chr10 36073945 36073978 -104242787 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 183 80 0 0 chr10 36074021 36074046 -104242719 + (CA)n Simple_repeat Simple_repeat 2 26 0 285 29 0 0 chr10 36074112 36074146 -104242619 + (TG)n Simple_repeat Simple_repeat 2 35 0 252 86 0 0 chr10 36074271 36074306 -104242459 + (TG)n Simple_repeat Simple_repeat 2 36 0 417 39 0 0 chr10 36074500 36074551 -104242214 + (TG)n Simple_repeat Simple_repeat 2 52 0 209 286 0 0 chr10 36074650 36074699 -104242066 + (CA)n Simple_repeat Simple_repeat 2 50 0 207 280 0 0 chr10 36075129 36075179 -104241586 + (CA)n Simple_repeat Simple_repeat 1 50 0 216 97 0 0 chr10 36076206 36076237 -104240528 + (TA)n Simple_repeat Simple_repeat 2 32 0 285 98 0 0 chr10 36076252 36076293 -104240472 + (GGGAGA)n Simple_repeat Simple_repeat 5 45 0 411 107 0 0 chr10 36076423 36076498 -104240267 + (TG)n Simple_repeat Simple_repeat 1 75 0 25 0 0 0 chr10 36077015 36077040 -104239725 + GC_rich Low_complexity Low_complexity 1 25 0 573 175 33 109 chr10 36077710 36077893 -104238872 - L1M4 LINE L1 -3361 2785 2617 280 260 121 56 chr10 36077953 36078129 -104238636 - L1ME LINE L1 -294 5827 5631 1854 164 91 30 chr10 36078129 36078298 -104238467 + MSTD LTR MaLR 1 158 -238 1856 167 0 28 chr10 36078298 36078615 -104238150 + AluJo SINE Alu 1 308 -4 1854 164 91 30 chr10 36078615 36078818 -104237947 + MSTD LTR MaLR 158 396 0 280 260 121 56 chr10 36078818 36078872 -104237893 - L1ME LINE L1 -490 5631 5582 26 0 0 0 chr10 36080186 36080212 -104236553 + AT_rich Low_complexity Low_complexity 1 26 0 1654 180 31 10 chr10 36080716 36081005 -104235760 + AluJo SINE Alu 5 299 -13 537 235 67 0 chr10 36082441 36082590 -104234175 - MER103 DNA DNA -7 159 1 42 0 0 0 chr10 36083033 36083075 -104233690 + AT_rich Low_complexity Low_complexity 1 42 0 1780 130 20 4 chr10 36083079 36083333 -104233432 - AluSx SINE Alu -54 258 1 28 29 0 0 chr10 36083443 36083478 -104233287 + AT_rich Low_complexity Low_complexity 1 35 0 329 311 91 36 chr10 36083496 36083715 -104233050 - MIR SINE MIR -3 259 29 183 42 0 0 chr10 36084177 36084201 -104232564 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 295 277 0 24 chr10 36084836 36084919 -104231846 + MIR SINE MIR 18 98 -110 221 313 31 0 chr10 36085927 36085991 -104230774 + L2 LINE L2 3201 3266 -6 530 257 119 15 chr10 36087052 36087254 -104229511 - L2 LINE L2 0 3313 3091 2988 157 13 23 chr10 36087286 36087896 -104228869 + pTR5 LTR ERV1 742 1345 -1093 3839 132 22 136 chr10 36087911 36088839 -104227926 + LTR12 LTR ERV1 5 826 0 2221 96 3 3 chr10 36089015 36089308 -104227457 - AluY SINE Alu -18 293 1 350 314 68 10 chr10 36089509 36089637 -104227128 - L2 LINE L2 -494 2820 2674 2122 141 0 0 chr10 36089637 36089936 -104226829 + AluJo SINE Alu 1 299 -13 350 314 68 10 chr10 36089936 36090014 -104226751 - L2 LINE L2 -640 2674 2602 181 217 22 0 chr10 36090790 36090836 -104225929 - MIR SINE MIR -109 153 107 301 284 0 49 chr10 36091086 36091188 -104225577 + (CA)n Simple_repeat Simple_repeat 1 97 0 3081 126 67 13 chr10 36091238 36091777 -104224988 - L1MA2 LINE L1 0 6304 5737 287 328 55 8 chr10 36091867 36091995 -104224770 + L3b LINE CR1 1162 1295 -288 464 294 45 40 chr10 36093375 36093576 -104223189 - MIR SINE MIR -51 211 10 22 0 0 0 chr10 36093893 36093915 -104222850 + AT_rich Low_complexity Low_complexity 1 22 0 225 98 0 98 chr10 36094065 36094106 -104222659 - U2 snRNA snRNA -150 38 2 363 304 44 44 chr10 36095327 36095508 -104221257 - MIR SINE MIR -51 211 31 2562 39 7 13 chr10 36095513 36095822 -104220943 - AluY SINE Alu -4 307 1 696 175 133 0 chr10 36095824 36095967 -104220798 - FRAM SINE Alu -15 161 1 2543 57 0 0 chr10 36095979 36096276 -104220489 - AluY SINE Alu -14 297 1 494 56 127 0 chr10 36097114 36097185 -104219580 + MADE1 DNA Mariner 1 80 0 1903 136 44 0 chr10 36098668 36098941 -104217824 - AluSx SINE Alu -27 285 1 4671 119 116 132 chr10 36099184 36100468 -104216297 - pTR5 LTR ERV1 -143 2295 741 609 134 62 18 chr10 36100688 36100800 -104215965 + THE1C LTR MaLR 1 117 -258 1699 191 0 7 chr10 36101395 36101876 -104214889 - AluJo SINE Alu 0 312 1 2291 121 3 0 chr10 36105341 36105648 -104211117 + AluSq SINE Alu 1 308 -5 201 314 58 76 chr10 36106796 36106968 -104209797 - L2 LINE L2 -179 3093 2925 256 274 48 12 chr10 36107075 36107159 -104209606 - L2 LINE L2 -45 3268 3182 2258 92 0 41 chr10 36107225 36107542 -104209223 + AluSg SINE Alu 1 304 -6 469 281 86 41 chr10 36107679 36107900 -104208865 - MIR SINE MIR -10 252 22 215 250 0 18 chr10 36107920 36107976 -104208789 + MER5B DNA MER1_type 72 126 -52 725 200 0 22 chr10 36107989 36108124 -104208641 - FLAM_C SINE Alu 0 133 2 264 127 0 0 chr10 36108131 36108186 -104208579 + (TTTAG)n Simple_repeat Simple_repeat 1 55 0 1946 157 0 0 chr10 36108186 36108472 -104208293 - AluJb SINE Alu -26 286 1 2592 61 0 10 chr10 36110297 36110610 -104206155 + AluY SINE Alu 1 310 -1 208 322 73 41 chr10 36111074 36111203 -104205562 + MIR SINE MIR 9 132 -130 2170 110 0 0 chr10 36111203 36111484 -104205281 + AluSx SINE Alu 23 303 -9 208 322 73 41 chr10 36111484 36111599 -104205166 + MIR SINE MIR 132 261 -1 1991 153 46 100 chr10 36115081 36115152 -104201613 - Tigger2a DNA MER2_type -2274 434 361 1781 171 3 10 chr10 36115152 36115450 -104201315 - AluSx SINE Alu -16 296 1 1991 153 46 100 chr10 36115450 36115837 -104200928 - Tigger2a DNA MER2_type -2347 361 1 243 341 0 0 chr10 36116092 36116180 -104200585 - MIR SINE MIR -2 260 173 233 303 8 42 chr10 36116179 36116298 -104200467 + MIR SINE MIR 23 137 -71 * 215 324 10 29 chr10 36116459 36116561 -104200204 - L3b LINE CR1 -382 1201 1102 1609 226 45 59 chr10 36120860 36121067 -104195698 + MLT1D LTR MaLR 1 209 -296 1298 171 140 8 chr10 36121067 36121324 -104195441 + AluSg1 SINE Alu 1 291 -18 1609 226 45 59 chr10 36121324 36121624 -104195141 + MLT1D LTR MaLR 209 501 -4 15356 137 16 7 chr10 36122495 36124886 -104191879 - Tigger1 DNA MER2_type -5 2413 1 2634 228 88 50 chr10 36124961 36125758 -104191007 - MER21B LTR ERV1 -36 827 1 599 239 77 43 chr10 36126356 36126590 -104190175 - MIR SINE MIR 0 262 21 2113 105 6 53 chr10 36127038 36127361 -104189404 - AluSx SINE Alu -4 308 1 222 228 18 18 chr10 36127399 36127456 -104189309 + CT-rich Low_complexity Low_complexity 4 60 0 1731 179 7 14 chr10 36127861 36128152 -104188613 + AluJb SINE Alu 1 289 -23 1753 121 0 16 chr10 36129972 36130229 -104186536 - AluSx SINE Alu -8 304 52 390 121 0 0 chr10 36130237 36130303 -104186462 + (T)n Simple_repeat Simple_repeat 1 66 0 43620 33 21 2 chr10 36130305 36136343 -104180422 - L1HS LINE L1 0 6155 2 298 313 17 43 chr10 36136716 36136831 -104179934 - MIR SINE MIR -142 120 9 2098 107 4 0 chr10 36136988 36137312 -104179453 - AluSx SINE Alu 0 325 1 258 258 91 0 chr10 36137587 36137653 -104179112 - MIR3 SINE MIR -51 157 86 1972 154 0 0 chr10 36137836 36138129 -104178636 + AluSx SINE Alu 1 293 -19 198 118 0 0 chr10 36138133 36138167 -104178598 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 550 339 49 5 chr10 36138219 36138443 -104178322 - L3 LINE CR1 -278 1299 1066 262 90 15 104 chr10 36138785 36138852 -104177913 + HSMAR1 DNA Mariner 1 61 -1226 * 347 111 16 63 chr10 36138848 36138911 -104177854 - MADE1 DNA Mariner -20 60 1 228 274 41 0 chr10 36139651 36139724 -104177041 - MIR3 SINE MIR -6 202 127 324 316 89 32 chr10 36139919 36140109 -104176656 + MIR3 SINE MIR 1 201 -7 1043 178 0 6 chr10 36140387 36140567 -104176198 - FRAM SINE Alu -3 173 1 2009 165 0 0 chr10 36141945 36142254 -104174511 + AluSx SINE Alu 1 309 -3 467 277 57 0 chr10 36142256 36142397 -104174368 - MIR SINE MIR -13 249 101 183 250 70 70 chr10 36142477 36142577 -104174188 + MIR3 SINE MIR 109 208 0 2095 109 3 0 chr10 36143349 36143633 -104173132 + AluSx SINE Alu 14 298 -14 1996 230 67 66 chr10 36144863 36144922 -104171843 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36144922 36145222 -104171543 + AluSx SINE Alu 1 299 -13 1996 230 67 66 chr10 36145222 36145861 -104170904 + L1MC4 LINE L1 7400 8042 0 1345 139 15 157 chr10 36145959 36146283 -104170482 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36147168 36147944 -104168821 + L1ME1 LINE L1 792 1592 -4814 3198 234 73 28 chr10 36147983 36149762 -104167003 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36151128 36151153 -104165612 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36151252 36151371 -104165394 + MIR SINE MIR 49 169 -39 506 274 102 21 chr10 36152417 36152603 -104164162 + MER63A DNA MER1_type 1 201 -9 676 108 0 18 chr10 36152660 36152771 -104163994 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36152771 36152811 -104163954 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36154341 36154639 -104162126 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36154669 36154905 -104161860 - L1PA10 LINE L1 -11 6157 5908 297 0 0 0 chr10 36157053 36157086 -104159679 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 113 0 0 chr10 36157900 36157953 -104158812 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 295 228 8 36 chr10 36158489 36158591 -104158174 + L1MDb LINE L1 2397 2521 -3907 2141 151 45 19 chr10 36158625 36159003 -104157762 + MER61D LTR ERV1 114 501 0 3537 250 72 43 chr10 36159003 36160291 -104156474 + L1MDb LINE L1 2492 3741 -2665 1975 136 0 4 chr10 36160291 36160571 -104156194 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 36160571 36160605 -104156160 + (CA)n Simple_repeat Simple_repeat 1 34 0 3537 250 72 43 chr10 36160605 36160885 -104155880 + L1MDb LINE L1 3740 4107 -2299 357 244 42 74 chr10 36160896 36161113 -104155652 + L1MCc LINE L1 20 229 -6194 232 322 52 17 chr10 36161597 36161712 -104155053 + L1MCc LINE L1 1042 1160 -5262 2271 216 85 57 chr10 36161764 36161885 -104154880 + L1MCc LINE L1 1036 1152 -5789 4488 176 18 8 chr10 36161885 36162605 -104154160 - MER44D DNA MER2_type -3 602 4 2271 216 85 57 chr10 36162605 36163684 -104153081 + L1MCc LINE L1 1152 2786 -4155 1440 156 4 13 chr10 36163684 36163922 -104152843 + AluSg/x SINE Alu 66 301 -9 428 193 126 15 chr10 36163936 36164071 -104152694 + L1MEc LINE L1 1762 1911 -4485 520 221 89 30 chr10 36164086 36164357 -104152408 + L1MEc LINE L1 1998 2284 -4112 260 226 97 113 chr10 36164464 36164650 -104152115 + L1ME1 LINE L1 5881 6063 -103 229 262 60 0 chr10 36164680 36164764 -104152001 + L1MC4 LINE L1 6615 6703 -1339 3478 149 13 6 chr10 36167187 36167710 -104149055 - MER1A DNA MER1_type 0 527 1 248 319 0 0 chr10 36167733 36167805 -104148960 - MIR SINE MIR -39 223 152 265 359 17 25 chr10 36168244 36168423 -104148342 + MIR SINE MIR 20 195 -67 204 240 0 40 chr10 36170275 36170325 -104146440 + C-rich Low_complexity Low_complexity 3 50 0 1001 39 0 23 chr10 36170595 36170723 -104146042 - L1PA13 LINE L1 0 6163 6039 381 145 181 0 chr10 36170723 36170806 -104145959 + MER4A LTR ERV1 1 98 -566 1655 150 169 68 chr10 36170806 36171173 -104145592 + MER4A LTR ERV1 261 664 0 1415 76 5 5 chr10 36171173 36171371 -104145394 - L1PA13 LINE L1 -121 6042 5845 451 305 147 20 chr10 36171473 36171670 -104145095 + MIR SINE MIR 15 236 -26 1619 206 78 9 chr10 36171697 36172018 -104144747 - MER61A LTR ERV1 0 343 1 2951 120 37 76 chr10 36172317 36172859 -104143906 + LTR26B LTR ERV1 11 531 0 1504 199 33 23 chr10 36174943 36175057 -104141708 + AluJo SINE Alu 1 112 -200 2577 165 19 14 chr10 36175057 36175481 -104141284 + MSTB LTR MaLR 1 426 0 1504 199 33 23 chr10 36175481 36175673 -104141092 + AluJo SINE Alu 112 310 -2 21 57 0 0 chr10 36177699 36177734 -104139031 + AT_rich Low_complexity Low_complexity 1 35 0 1614 166 0 56 chr10 36177764 36178066 -104138699 + AluJo SINE Alu 1 285 -27 2185 111 3 0 chr10 36178160 36178457 -104138308 + AluSx SINE Alu 1 298 -14 1879 238 67 65 chr10 36179687 36179746 -104137019 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36179746 36180046 -104136719 + AluSx SINE Alu 1 299 -13 1879 238 67 65 chr10 36180046 36180684 -104136081 + L1MC4 LINE L1 7400 8042 0 1333 142 16 155 chr10 36180782 36181105 -104135660 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36181990 36182766 -104133999 + L1ME1 LINE L1 792 1592 -4814 3199 234 73 28 chr10 36182805 36184583 -104132182 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36185949 36185974 -104130791 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36186073 36186192 -104130573 + MIR SINE MIR 49 169 -39 506 232 125 0 chr10 36187237 36187349 -104129416 + MER63 DNA MER1_type 1 752 -310 676 108 0 18 chr10 36187480 36187591 -104129174 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36187591 36187631 -104129134 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36189161 36189459 -104127306 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36189489 36189725 -104127040 - L1PA10 LINE L1 -11 6157 5908 657 246 36 48 chr10 36190558 36190806 -104125959 + MSTB LTR MaLR 181 425 -1 835 202 53 11 chr10 36190813 36191001 -104125764 + AluJo SINE Alu 115 310 -2 2379 94 3 0 chr10 36192886 36193195 -104123570 - AluSp SINE Alu -3 310 1 25 0 0 0 chr10 36194730 36194755 -104122010 + AT_rich Low_complexity Low_complexity 1 25 0 469 252 0 24 chr10 36194811 36194970 -104121795 - MIR SINE MIR -61 147 25 219 282 77 0 chr10 36195039 36195117 -104121648 - MIR SINE MIR -106 102 19 2232 109 0 13 chr10 36198752 36199055 -104117710 + AluSq SINE Alu 1 299 -14 208 329 38 13 chr10 36199075 36199154 -104117611 - L2 LINE L2 0 3272 3192 1960 139 0 14 chr10 36199479 36199774 -104116991 + AluJb SINE Alu 1 291 -21 400 129 58 6 chr10 36199791 36199962 -104116803 + (TA)n Simple_repeat Simple_repeat 1 180 0 415 285 102 75 chr10 36200114 36200419 -104116346 + L1ME LINE L1 5354 5666 -455 28 48 0 0 chr10 36201202 36201244 -104115521 + AT_rich Low_complexity Low_complexity 1 42 0 2318 99 0 0 chr10 36201567 36201898 -104114867 - AluSx SINE Alu 0 331 1 1932 142 26 0 chr10 36202774 36203076 -104113689 + AluSx SINE Alu 1 310 -2 1320 158 0 0 chr10 36203113 36203315 -104113450 + AluSg/x SINE Alu 100 301 -11 2135 131 0 0 chr10 36204253 36204558 -104112207 + AluSg SINE Alu 2 306 -4 229 218 0 18 chr10 36205186 36205241 -104111524 + MER5A DNA MER1_type 111 164 -25 1806 160 0 7 chr10 36205799 36206099 -104110666 - AluJb SINE Alu -4 308 11 1839 10 0 0 chr10 36206133 36206330 -104110435 - L1PA3 LINE L1 0 6155 5959 4260 118 13 22 chr10 36207189 36207471 -104109294 + L1PB3 LINE L1 5516 5799 -355 240 35 0 0 chr10 36207471 36207500 -104109265 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 249 33 0 0 chr10 36207499 36207529 -104109236 + (TA)n Simple_repeat Simple_repeat 1 30 0 4260 118 13 22 chr10 36207500 36207528 -104109237 + L1PB3 LINE L1 5799 5826 -328 300 27 0 0 chr10 36207528 36207565 -104109200 + (CA)n Simple_repeat Simple_repeat 2 38 0 4260 118 13 22 chr10 36207565 36207917 -104108848 + L1PB3 LINE L1 5826 6144 -10 248 250 26 0 chr10 36208494 36208570 -104108195 - MIR SINE MIR -10 252 175 2248 102 3 0 chr10 36209100 36209393 -104107372 + AluSq SINE Alu 1 294 -19 204 327 40 20 chr10 36209567 36209668 -104107097 + MIR SINE MIR 159 261 -1 492 249 53 21 chr10 36209796 36209985 -104106780 + L1ME3A LINE L1 5084 5278 -868 1234 218 136 12 chr10 36209988 36210319 -104106446 - MLT1F1 LTR MaLR -8 559 188 710 79 55 12 chr10 36210321 36210485 -104106280 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 1885 134 16 32 chr10 36210587 36210900 -104105865 + AluSx SINE Alu 5 312 0 313 255 38 19 chr10 36210904 36211010 -104105755 - MLT1F1 LTR MaLR -485 108 1 2543 278 35 14 chr10 36211015 36211876 -104104889 + L1ME3A LINE L1 5283 6161 -9 22 0 0 0 chr10 36211948 36211970 -104104795 + AT_rich Low_complexity Low_complexity 1 22 0 2094 115 31 0 chr10 36212140 36212426 -104104339 + AluSx SINE Alu 1 295 -17 480 200 0 0 chr10 36212690 36212795 -104103970 + (TG)n Simple_repeat Simple_repeat 2 106 0 2298 110 0 0 chr10 36213224 36213525 -104103240 - AluSg SINE Alu -9 301 1 195 100 0 0 chr10 36214171 36214201 -104102564 + (A)n Simple_repeat Simple_repeat 1 30 0 312 340 50 13 chr10 36215218 36215377 -104101388 + L2 LINE L2 2542 2706 -608 1124 291 48 39 chr10 36215387 36215929 -104100836 - HERVL LTR ERVL -1243 4411 3865 343 353 39 13 chr10 36215961 36216117 -104100648 - HERVL LTR ERVL -1939 3825 3666 1776 110 6 110 chr10 36216117 36216462 -104100303 - AluSc SINE Alu 0 309 1 1164 164 18 50 chr10 36216467 36216687 -104100078 - AluJo SINE Alu -17 295 83 2226 330 64 35 chr10 36216759 36217738 -104099027 - HERVL LTR ERVL -2101 3553 2475 1862 131 39 20 chr10 36217738 36218044 -104098721 - AluJo SINE Alu 0 312 1 2226 330 64 35 chr10 36218044 36218870 -104097895 - HERVL LTR ERVL -3179 2475 1675 398 217 96 0 chr10 36218933 36219016 -104097749 + MER58A DNA MER1_type 1 91 -16 748 321 8 8 chr10 36219058 36219310 -104097455 - HERVL LTR ERVL -3882 1114 863 1514 161 56 25 chr10 36219310 36219399 -104097366 - AluJb SINE Alu -14 298 213 3004 128 22 54 chr10 36219399 36219901 -104096864 + LTR19A LTR ERV1 1 486 0 1514 161 56 25 chr10 36219901 36220096 -104096669 - AluJb SINE Alu -99 213 5 222 37 0 0 chr10 36220635 36220662 -104096103 + (TA)n Simple_repeat Simple_repeat 2 28 0 2132 118 7 3 chr10 36220662 36220958 -104095807 - AluSc SINE Alu -12 297 1 1157 315 39 24 chr10 36221197 36221654 -104095111 - LTR16B LTR ERVL 0 464 1 1697 199 99 54 chr10 36221659 36221832 -104094933 + L1ME1 LINE L1 4583 4747 -1399 1960 164 29 32 chr10 36221832 36222179 -104094586 - MER7A DNA MER2_type -2 344 1 1697 199 99 54 chr10 36222179 36222251 -104094514 + L1ME1 LINE L1 4747 4814 -1332 1243 124 139 20 chr10 36222251 36222453 -104094312 + MER30 DNA MER1_type 1 226 -4 1697 199 99 54 chr10 36222453 36222759 -104094006 + L1ME1 LINE L1 4814 5160 -986 768 165 0 8 chr10 36222761 36222882 -104093883 + AluJb SINE Alu 1 120 -192 412 315 0 33 chr10 36223242 36223426 -104093339 + GA-rich Low_complexity Low_complexity 1 178 0 506 209 0 29 chr10 36223494 36223633 -104093132 + AluY SINE Alu 175 309 -2 3704 199 52 41 chr10 36223634 36224519 -104092246 + L1ME1 LINE L1 5153 6067 -99 3041 102 102 0 chr10 36224519 36224960 -104091805 - LTR19A LTR ERV1 0 486 1 3704 199 52 41 chr10 36224960 36225057 -104091708 + L1ME1 LINE L1 6067 6161 -5 25 0 0 0 chr10 36225131 36225156 -104091609 + AT_rich Low_complexity Low_complexity 1 25 0 586 226 162 39 chr10 36226159 36226363 -104090402 - MIR SINE MIR -26 236 8 365 208 0 13 chr10 36226365 36226442 -104090323 + MER116 DNA Mariner 3 78 -2 262 314 36 29 chr10 36226629 36226769 -104089996 + L3 LINE CR1 1332 1472 -105 6649 65 3 3 chr10 36226945 36227725 -104089040 - LTR17 LTR ERV1 0 780 1 1962 135 30 3 chr10 36228040 36228336 -104088429 - AluSx SINE Alu -7 305 2 206 162 27 0 chr10 36230232 36230269 -104086496 + T-rich Low_complexity Low_complexity 2 39 0 728 181 94 56 chr10 36230997 36231157 -104085608 + FAM SINE Alu 1 166 -9 1766 171 0 7 chr10 36231161 36231474 -104085291 + AluJo SINE Alu 3 313 0 21 0 0 0 chr10 36231583 36231604 -104085161 + AT_rich Low_complexity Low_complexity 1 21 0 260 340 85 21 chr10 36231751 36231939 -104084826 + L2 LINE L2 2681 2880 -434 302 256 24 61 chr10 36232230 36232394 -104084371 + MER113 DNA MER1_type? 7 164 -357 261 297 68 0 chr10 36232394 36232468 -104084297 + L2 LINE L2 3163 3241 -31 522 279 128 21 chr10 36232481 36232608 -104084157 + MER113 DNA MER1_type? 146 258 -263 2976 118 27 0 chr10 36232608 36233022 -104083743 + MSTA LTR MaLR 4 428 0 522 279 128 21 chr10 36233022 36233231 -104083534 + MER113 DNA MER1_type? 258 518 -3 1909 154 0 13 chr10 36233506 36233804 -104082961 - AluJb SINE Alu -18 294 1 2311 126 35 32 chr10 36234672 36235046 -104081719 - THE1C LTR MaLR 0 375 1 263 323 121 0 chr10 36235308 36235407 -104081358 - L2 LINE L2 0 3272 3162 366 330 0 0 chr10 36235456 36235568 -104081197 - L2 LINE L2 0 3313 3202 447 260 36 6 chr10 36235698 36235915 -104080850 + L1M4c LINE L1 2033 2265 -4117 1952 121 3 24 chr10 36235921 36236080 -104080685 + AluSg SINE Alu 1 153 -157 5034 51 5 5 chr10 36236080 36236671 -104080094 + LTR10C LTR ERV1 1 591 0 1952 121 3 24 chr10 36236671 36236800 -104079965 + AluSg SINE Alu 153 283 -27 216 0 0 0 chr10 36236804 36236828 -104079937 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5157 234 22 12 chr10 36236829 36238204 -104078561 + L1M4c LINE L1 2311 3660 -2722 2552 197 119 7 chr10 36238204 36238783 -104077982 - LTR48B LTR ERV1 0 644 1 679 171 0 0 chr10 36239201 36239318 -104077447 + L1MA10 LINE L1 5154 5270 -876 1243 221 0 0 chr10 36239318 36239562 -104077203 + AluSx SINE Alu 1 244 -68 4707 209 29 19 chr10 36239627 36239668 -104077097 + L1MA10 LINE L1 5259 5298 -1036 180 0 0 0 chr10 36239668 36239688 -104077077 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4707 209 29 19 chr10 36239688 36240523 -104076242 + L1MA10 LINE L1 5298 6150 -184 213 39 0 0 chr10 36240523 36240549 -104076216 + (CA)n Simple_repeat Simple_repeat 1 26 0 4707 209 29 19 chr10 36240549 36240729 -104076036 + L1MA10 LINE L1 6150 6327 -7 2544 238 50 41 chr10 36240738 36241032 -104075733 - L1MEc LINE L1 -1081 5134 4844 1772 186 0 10 chr10 36241032 36241333 -104075432 - AluJo SINE Alu -12 300 3 2544 238 50 41 chr10 36241333 36242010 -104074755 - L1MEc LINE L1 -1371 4844 4154 329 200 13 13 chr10 36242081 36242169 -104074596 - L1MEc LINE L1 -2374 3841 3754 409 94 16 0 chr10 36242170 36242234 -104074531 + (TTCC)n Simple_repeat Simple_repeat 2 66 0 1456 274 111 40 chr10 36242242 36242314 -104074451 - L1MEc LINE L1 -2452 3763 3698 1901 175 136 18 chr10 36242314 36242697 -104074068 - MSTA LTR MaLR 0 428 1 1456 274 111 40 chr10 36242697 36243846 -104072919 - L1MEc LINE L1 -2517 3698 2316 918 201 0 73 chr10 36243849 36244053 -104072712 - Tigger5 DNA MER2_type -3 2320 2132 1366 225 16 29 chr10 36244068 36244097 -104072668 - Tigger5 DNA MER2_type -2016 307 279 4330 91 13 2 chr10 36244097 36244645 -104072120 + MER41A LTR ERV1 1 554 0 1366 225 16 29 chr10 36244645 36244926 -104071839 - Tigger5 DNA MER2_type -2044 279 1 724 284 41 86 chr10 36245880 36246952 -104069813 - L1MEc LINE L1 -4583 1813 790 1657 246 93 14 chr10 36247469 36247966 -104068799 - MLT1G1 LTR MaLR -2 593 1 422 312 102 32 chr10 36248262 36248663 -104068102 - L2 LINE L2 -1103 2211 1783 545 138 0 0 chr10 36248672 36248752 -104068013 - MER41A LTR ERV1 0 554 475 2030 85 8 8 chr10 36248860 36249120 -104067645 - AluSx SINE Alu -29 283 24 376 321 113 54 chr10 36249359 36250101 -104066664 - L2 LINE L2 -2190 1124 339 4383 134 19 34 chr10 36250262 36250563 -104066202 + LTR8A LTR ERV1 1 305 -422 5134 127 22 17 chr10 36250563 36251338 -104065427 - MER4E LTR ERV1 0 779 1 4383 134 19 34 chr10 36251338 36251774 -104064991 + LTR8A LTR ERV1 305 727 0 590 270 92 80 chr10 36254259 36254582 -104062183 - MLT1H LTR MaLR 0 549 218 2403 148 11 16 chr10 36254582 36254959 -104061806 + THE1C LTR MaLR 1 375 0 590 270 92 80 chr10 36254959 36255061 -104061704 - MLT1H LTR MaLR -331 218 119 2299 118 28 22 chr10 36255282 36255637 -104061128 - THE1B LTR MaLR 0 364 8 180 167 130 19 chr10 36257134 36257181 -104059584 - L3 LINE CR1 -880 697 642 441 0 0 0 chr10 36257181 36257230 -104059535 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 2562 158 41 0 chr10 36260081 36260493 -104056272 - MSTB1 LTR MaLR 0 432 4 229 313 40 0 chr10 36260851 36260950 -104055815 - MIR SINE MIR -56 206 104 1167 214 54 90 chr10 36260967 36261355 -104055410 - MLT1B LTR MaLR -16 374 1 231 217 22 0 chr10 36261355 36261401 -104055364 - MIR SINE MIR -126 82 36 184 281 201 58 chr10 36261743 36261882 -104054883 + MIR3 SINE MIR 16 174 -34 23 33 0 0 chr10 36262488 36262518 -104054247 + AT_rich Low_complexity Low_complexity 1 30 0 277 240 53 93 chr10 36263858 36263979 -104052786 + MIR SINE MIR 33 148 -114 2253 110 0 31 chr10 36263979 36264298 -104052467 - AluSx SINE Alu -3 309 1 277 240 53 93 chr10 36264298 36264326 -104052439 + MIR SINE MIR 148 176 -86 379 202 76 59 chr10 36264326 36264445 -104052320 - MIR SINE MIR -62 200 80 751 232 54 54 chr10 36264682 36264746 -104052019 - MIR SINE MIR -8 254 191 1683 121 0 4 chr10 36264746 36264977 -104051788 + MER30 DNA MER1_type 1 230 0 751 232 54 54 chr10 36264977 36265136 -104051629 - MIR SINE MIR -70 192 31 487 161 0 21 chr10 36265273 36265366 -104051399 - LTR33 LTR ERVL -7 514 424 1739 160 22 0 chr10 36265502 36265940 -104050825 + AluSx SINE Alu 1 444 0 228 111 0 0 chr10 36265977 36266013 -104050752 + (GA)n Simple_repeat Simple_repeat 1 36 0 602 278 91 27 chr10 36266023 36266286 -104050479 - LTR33 LTR ERVL -237 284 5 267 317 33 55 chr10 36266313 36266496 -104050269 - L2 LINE L2 -1386 1928 1750 296 250 192 0 chr10 36266947 36267051 -104049714 + LTR47A LTR ERVL 261 384 -68 1195 104 0 0 chr10 36268460 36268624 -104048141 + AluY SINE Alu 137 300 -11 182 269 0 39 chr10 36268766 36268818 -104047947 - L2 LINE L2 0 3313 3264 202 345 80 85 chr10 36269138 36269226 -104047539 - L2 LINE L2 0 3272 3185 1975 142 0 7 chr10 36269226 36269559 -104047206 - AluSq SINE Alu 0 313 1 202 345 80 85 chr10 36269559 36269919 -104046846 - L2 LINE L2 -87 3185 2826 2057 164 9 18 chr10 36270769 36271111 -104045654 + MER44D DNA MER2_type 1 609 0 452 316 12 36 chr10 36271740 36271908 -104044857 + MER5A DNA MER1_type 26 189 0 396 129 0 29 chr10 36272291 36272361 -104044404 + MLT1A1 LTR MaLR 1 68 -297 928 248 139 34 chr10 36272361 36272786 -104043979 + LTR1B LTR ERV1 28 496 -330 1982 112 34 7 chr10 36272786 36273081 -104043684 + AluSq SINE Alu 11 313 0 270 209 48 150 chr10 36273108 36273295 -104043470 + LTR28 LTR ERV1 838 1005 -15 1490 205 38 7 chr10 36273318 36273611 -104043154 + MLT1A1 LTR MaLR 64 365 0 26 88 0 0 chr10 36274815 36274883 -104041882 + AT_rich Low_complexity Low_complexity 1 68 0 1297 284 91 45 chr10 36274935 36275739 -104041026 - L1M4 LINE L1 -922 5224 4384 2130 249 47 74 chr10 36275767 36275845 -104040920 + L1ME3A LINE L1 5254 5333 -837 1846 181 0 3 chr10 36275845 36276154 -104040611 + AluJb SINE Alu 1 308 -4 2130 249 47 74 chr10 36276154 36276268 -104040497 + L1ME3A LINE L1 5333 5449 -721 1947 162 23 45 chr10 36276268 36276371 -104040394 + MER2 DNA MER2_type 1 105 -239 1554 161 88 0 chr10 36276371 36276665 -104040100 + AluSx SINE Alu 1 317 0 1947 162 23 45 chr10 36276665 36276912 -104039853 + MER2 DNA MER2_type 105 344 0 2130 249 47 74 chr10 36276912 36277598 -104039167 + L1ME3A LINE L1 5449 6109 -61 362 304 19 0 chr10 36278012 36278173 -104038592 + (TA)n Simple_repeat Simple_repeat 1 164 0 311 247 36 13 chr10 36278835 36279143 -104037622 + (TGAA)n Simple_repeat Simple_repeat 1 315 0 359 328 35 18 chr10 36279270 36279441 -104037324 - LTR16C LTR ERVL -4 487 314 1325 210 176 29 chr10 36279683 36280085 -104036680 + MLT2B1 LTR ERVL 1 467 -53 468 51 0 0 chr10 36280085 36280144 -104036621 + (TC)n Simple_repeat Simple_repeat 2 60 0 1325 210 176 29 chr10 36280144 36280156 -104036609 + MLT2B1 LTR ERVL 467 476 -44 252 167 42 0 chr10 36280183 36280255 -104036510 + (TA)n Simple_repeat Simple_repeat 1 75 0 249 108 0 0 chr10 36280256 36280293 -104036472 + (CA)n Simple_repeat Simple_repeat 2 38 0 1564 194 29 51 chr10 36280293 36280436 -104036329 + MER2 DNA MER2_type 3 148 -197 1457 94 94 9 chr10 36280436 36280648 -104036117 - MER30 DNA MER1_type 0 230 1 1564 194 29 51 chr10 36280648 36280855 -104035910 + MER2 DNA MER2_type 148 345 0 2847 132 4 69 chr10 36281951 36282030 -104034735 + L1PA15 LINE L1 5703 5786 -379 2076 124 6 19 chr10 36282030 36282344 -104034421 + AluSx SINE Alu 1 310 -2 2847 132 4 69 chr10 36282344 36282757 -104034008 + L1PA15 LINE L1 5786 6163 -2 3226 97 12 7 chr10 36282973 36283405 -104033360 - MER57B LTR ERV1 0 434 1 1053 246 131 19 chr10 36284022 36284449 -104032316 - MLT1D LTR MaLR 0 505 31 2007 139 16 3 chr10 36284548 36284851 -104031914 - AluJb SINE Alu -5 307 1 2554 131 64 5 chr10 36285507 36285911 -104030854 - MSTA LTR MaLR 0 428 1 411 352 36 10 chr10 36286211 36286407 -104030358 + MIR SINE MIR 8 208 -54 2463 160 67 4 chr10 36287587 36288050 -104028715 - L1MB4 LINE L1 -2 6178 5687 1482 176 51 30 chr10 36288053 36288396 -104028369 - MSTA LTR MaLR 0 375 1 1459 178 0 46 chr10 36288396 36288638 -104028127 - L1MB4 LINE L1 -492 5688 5461 2076 199 56 7 chr10 36288638 36289081 -104027684 + MER31B LTR ERV1 2 466 0 1459 178 0 46 chr10 36289081 36289142 -104027623 - L1MB4 LINE L1 -719 5461 5399 1507 187 23 37 chr10 36289275 36289574 -104027191 + AluJo SINE Alu 1 295 -17 1886 141 25 3 chr10 36289576 36289860 -104026905 + AluSg SINE Alu 1 290 -20 226 234 64 0 chr10 36291130 36291177 -104025588 - MER91A DNA MER1_type -19 177 128 2070 108 0 74 chr10 36292004 36292328 -104024437 - AluSq SINE Alu -13 300 1 395 283 38 82 chr10 36292562 36292746 -104024019 - MIR SINE MIR -69 139 17 532 216 10 0 chr10 36293445 36293542 -104023223 - MER58A DNA MER1_type -6 101 4 574 319 123 36 chr10 36295764 36296387 -104020378 + L2 LINE L2 2599 3285 -28 489 236 50 71 chr10 36296479 36296661 -104020104 + L1ME LINE L1 5551 5728 -393 387 0 0 0 chr10 36297786 36297829 -104018936 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr10 36298425 36298455 -104018310 + AT_rich Low_complexity Low_complexity 1 30 0 2013 133 3 30 chr10 36298608 36298910 -104017855 - AluSq SINE Alu -19 294 1 198 339 62 0 chr10 36299651 36299716 -104017049 + MIR3 SINE MIR 5 73 -135 2396 171 87 5 chr10 36299776 36300202 -104016563 + LOR1b LTR ERV1 1 461 0 2306 112 0 0 chr10 36300451 36300756 -104016009 + AluSq SINE Alu 1 305 -8 777 138 7 90 chr10 36303073 36303218 -104013547 - FLAM_A SINE Alu 0 133 1 189 0 0 0 chr10 36303602 36303623 -104013142 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1624 168 26 53 chr10 36304447 36304750 -104012015 + AluJo SINE Alu 1 295 -17 2334 100 10 0 chr10 36305688 36305997 -104010768 - AluSq SINE Alu 0 313 2 1278 129 20 0 chr10 36306116 36306318 -104010447 + MER2 DNA MER2_type 5 210 -135 560 70 12 0 chr10 36307049 36307135 -104009630 + (TA)n Simple_repeat Simple_repeat 2 88 0 1620 161 24 37 chr10 36307835 36308133 -104008632 + AluJo SINE Alu 1 294 -18 30 0 0 0 chr10 36308133 36308163 -104008602 + AT_rich Low_complexity Low_complexity 1 30 0 186 71 0 0 chr10 36308644 36308672 -104008093 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2300 115 0 3 chr10 36308676 36308989 -104007776 - AluSx SINE Alu 0 312 1 192 40 0 0 chr10 36309486 36309511 -104007254 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 198 0 0 0 chr10 36310303 36310325 -104006440 + (T)n Simple_repeat Simple_repeat 1 22 0 197 267 83 17 chr10 36311109 36311169 -104005596 + MIR3 SINE MIR 125 188 -20 3065 125 7 0 chr10 36311599 36312023 -104004742 + MER1A DNA MER1_type 103 529 0 207 346 0 39 chr10 36312118 36312222 -104004543 + L2 LINE L2 2868 2967 -305 413 203 219 41 chr10 36312813 36312936 -104003829 + MIR SINE MIR 7 151 -111 1959 171 9 91 chr10 36312970 36313018 -104003747 + MER82 DNA MER2_type 2 52 -601 1960 146 4 4 chr10 36313018 36313299 -104003466 + AluJo SINE Alu 1 281 -31 212 0 36 0 chr10 36313303 36313331 -104003434 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1959 171 9 91 chr10 36313331 36313728 -104003037 + MER82 DNA MER2_type 55 415 -238 1555 206 28 22 chr10 36313731 36314069 -104002696 + MLT2C1 LTR ERVL 83 406 -8 2059 118 60 35 chr10 36314123 36314489 -104002276 - THE1C LTR MaLR 0 375 1 317 238 0 0 chr10 36314684 36314747 -104002018 - MIR3 SINE MIR -6 202 140 183 152 30 0 chr10 36315800 36315833 -104000932 + L3b LINE CR1 1194 1227 -356 316 322 50 39 chr10 36316025 36316205 -104000560 - MIR3 SINE MIR -10 198 17 284 191 79 0 chr10 36317342 36317405 -103999360 + MIR SINE MIR 185 252 -10 2177 111 3 0 chr10 36317746 36318035 -103998730 - AluSg SINE Alu -20 290 1 219 127 48 0 chr10 36318077 36318140 -103998625 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr10 36318209 36318251 -103998514 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr10 36318307 36318349 -103998416 + AT_rich Low_complexity Low_complexity 1 42 0 347 340 45 13 chr10 36318380 36318536 -103998229 - HAL1 LINE L1 -769 1738 1578 291 307 65 89 chr10 36318616 36319075 -103997690 - MLT1J LTR MaLR -62 449 2 689 128 0 0 chr10 36319330 36319424 -103997341 - AluJb SINE Alu -16 296 203 2085 129 0 10 chr10 36320242 36320551 -103996214 - AluSx SINE Alu -6 306 1 1455 190 4 4 chr10 36320736 36321004 -103995761 - AluJb SINE Alu -44 268 1 1333 192 4 0 chr10 36321006 36321282 -103995483 - L1 LINE L1 -3104 3042 2766 281 115 0 19 chr10 36321282 36321334 -103995431 - Alu SINE Alu 0 302 252 4320 166 8 33 chr10 36323566 36324418 -103992347 - L1MC1 LINE L1 -165 6666 5836 4480 207 49 37 chr10 36324975 36326070 -103990695 - L1MC1 LINE L1 -5145 1489 278 505 179 38 28 chr10 36326242 36326348 -103990417 - MER7A DNA MER2_type -241 105 1 279 0 0 0 chr10 36326353 36326384 -103990381 + (CA)n Simple_repeat Simple_repeat 2 32 0 34 55 0 0 chr10 36326596 36326651 -103990114 + AT_rich Low_complexity Low_complexity 1 55 0 1099 111 6 6 chr10 36327485 36327665 -103989100 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2092 119 0 0 chr10 36329107 36329409 -103987356 + AluSx SINE Alu 1 302 -10 284 331 69 14 chr10 36330025 36330170 -103986595 - L2 LINE L2 -190 3082 2930 397 294 90 28 chr10 36380580 36380757 -103936008 + LTR33 LTR ERVL 334 521 0 193 307 133 0 chr10 36381135 36381210 -103935555 - MIR3 SINE MIR -21 187 103 2018 150 0 0 chr10 36381379 36381673 -103935092 - AluJb SINE Alu -18 294 1 2296 117 0 0 chr10 36381808 36382116 -103934649 + AluSx SINE Alu 1 308 -4 295 214 34 0 chr10 36382131 36382220 -103934545 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 1543 193 23 3 chr10 36382716 36383021 -103933744 - AluJb SINE Alu -1 311 1 5670 86 9 0 chr10 36383497 36384182 -103932583 + LTR8 LTR ERV1 1 691 0 257 352 24 24 chr10 36384598 36384723 -103932042 + MIR SINE MIR 22 146 -62 1497 171 4 29 chr10 36386293 36386567 -103930198 + AluJo SINE Alu 21 287 -25 1077 118 0 9 chr10 36388281 36388501 -103928264 + (GGAA)n Simple_repeat Simple_repeat 4 219 0 1564 116 4 4 chr10 36388602 36388827 -103927938 + L1MA4A LINE L1 6072 6296 -7 1485 168 6 128 chr10 36388849 36389176 -103927589 + AluJb SINE Alu 1 287 -15 1150 121 56 0 chr10 36390830 36391028 -103925737 - L1MA8 LINE L1 -5 6286 6078 2323 102 3 0 chr10 36391030 36391334 -103925431 - AluSg SINE Alu -5 305 1 437 182 0 13 chr10 36391336 36391413 -103925352 - AluJo SINE Alu -176 136 61 813 207 86 94 chr10 36391422 36391737 -103925028 + L2 LINE L2 2758 3074 -239 2063 122 7 14 chr10 36392551 36392845 -103923920 - AluSx SINE Alu -20 292 1 1560 180 54 0 chr10 36392929 36393051 -103923714 + AluJo SINE Alu 1 115 -197 189 0 0 0 chr10 36393051 36393072 -103923693 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36393072 36393227 -103923538 + AluJo SINE Alu 115 293 -19 231 301 60 24 chr10 36393266 36393349 -103923416 - MIR3 SINE MIR -9 199 114 696 266 47 10 chr10 36393370 36393562 -103923203 - MIR SINE MIR 0 262 64 240 222 74 49 chr10 36393609 36393690 -103923075 - MIR SINE MIR -107 101 19 3007 83 3 0 chr10 36394869 36395232 -103921533 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr10 36395469 36395496 -103921269 + AT_rich Low_complexity Low_complexity 1 27 0 341 94 19 0 chr10 36396030 36396083 -103920682 + MER9 LTR ERVK 1 54 -457 1032 122 0 0 chr10 36396186 36396350 -103920415 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 999 125 0 0 chr10 36396947 36397083 -103919682 + AluSq/x SINE Alu 1 136 -176 683 80 20 20 chr10 36397085 36397185 -103919580 + AluY SINE Alu 210 309 -2 998 167 0 0 chr10 36397317 36397479 -103919286 + AluSx SINE Alu 146 307 -5 2201 128 0 0 chr10 36398409 36398706 -103918059 - AluSx SINE Alu -15 297 1 1714 172 0 40 chr10 36399567 36399869 -103916896 - AluJb SINE Alu -22 290 1 243 359 39 64 chr10 36400193 36400427 -103916338 - L2 LINE L2 -13 3259 3032 1731 160 59 3 chr10 36400446 36400734 -103916031 + AluJb SINE Alu 1 304 -8 2636 55 0 0 chr10 36401702 36402010 -103914755 + AluY SINE Alu 1 308 -3 950 291 19 12 chr10 36402192 36402450 -103914315 - MLT1L LTR MaLR -7 608 349 504 269 72 10 chr10 36402500 36402693 -103914072 - MLT1L LTR MaLR -409 206 2 276 333 12 0 chr10 36402694 36402775 -103913990 - L2 LINE L2 -47 3266 3185 2328 99 3 3 chr10 36403415 36403718 -103913047 - AluSq SINE Alu -10 303 1 3123 153 39 7 chr10 36403731 36404512 -103912253 + L1MA8 LINE L1 4856 5809 -482 367 29 57 14 chr10 36404512 36404582 -103912183 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3123 153 39 7 chr10 36404582 36405077 -103911688 + L1MA8 LINE L1 5809 6287 -4 1961 107 0 11 chr10 36405151 36405412 -103911353 + AluSx SINE Alu 1 258 -54 561 265 157 10 chr10 36405488 36405692 -103911073 - MIR SINE MIR 0 262 29 322 241 30 108 chr10 36406462 36406658 -103910107 + MIR SINE MIR 38 216 -46 1667 169 30 71 chr10 36406813 36407015 -103909750 - MLT1B LTR MaLR -35 355 173 1870 165 0 16 chr10 36407015 36407318 -103909447 - AluJb SINE Alu -14 298 1 1667 169 30 71 chr10 36407318 36407482 -103909283 - MLT1B LTR MaLR -217 173 4 212 0 36 0 chr10 36407606 36407634 -103909131 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1725 169 10 7 chr10 36407639 36407934 -103908831 - AluJo SINE Alu -16 296 1 2788 105 0 3 chr10 36408038 36408409 -103908356 - L1PB1 LINE L1 0 6151 5782 223 78 31 62 chr10 36408418 36408482 -103908283 + (TA)n Simple_repeat Simple_repeat 2 63 0 180 357 12 12 chr10 36410966 36411050 -103905715 - MIR SINE MIR -22 240 157 2328 96 6 3 chr10 36411169 36411481 -103905284 - AluSq SINE Alu 0 313 1 219 139 0 0 chr10 36412846 36412882 -103903883 + (T)n Simple_repeat Simple_repeat 1 36 0 334 328 89 64 chr10 36413781 36414455 -103902310 + L2 LINE L2 2196 2886 -428 227 338 0 26 chr10 36414509 36414586 -103902179 + L2 LINE L2 2992 3066 -206 368 324 143 50 chr10 36414980 36415148 -103901617 - L2 LINE L2 -15 3298 3096 2194 133 0 0 chr10 36415148 36415450 -103901315 + AluSq SINE Alu 1 302 -11 368 324 143 50 chr10 36415450 36415540 -103901225 - L2 LINE L2 -217 3096 3016 319 210 25 109 chr10 36415541 36415660 -103901105 - ERVL LTR ERVL -1119 4645 4537 249 180 0 0 chr10 36415699 36415749 -103901016 + CT-rich Low_complexity Low_complexity 3 52 0 2112 315 103 75 chr10 36415810 36417216 -103899549 - ERVL LTR ERVL -1382 4382 2887 4760 170 3 4 chr10 36417216 36417946 -103898819 + MER44D DNA MER2_type 4 604 -1 2112 315 103 75 chr10 36417946 36418789 -103897976 - ERVL LTR ERVL -2877 2887 2069 213 39 0 0 chr10 36418889 36418915 -103897850 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 2124 121 0 0 chr10 36418917 36419199 -103897566 - AluSx SINE Alu -30 282 1 1206 325 103 44 chr10 36419200 36420279 -103896486 + L2 LINE L2 2148 3309 -4 307 323 82 39 chr10 36420328 36420585 -103896180 - ERVL LTR ERVL -3736 2028 1761 358 348 43 29 chr10 36421282 36421627 -103895138 - L2 LINE L2 -523 2791 2442 233 161 81 48 chr10 36421933 36421995 -103894770 + MER91C DNA MER1_type 21 84 -56 207 0 0 0 chr10 36422816 36422839 -103893926 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2232 139 96 3 chr10 36424884 36425256 -103891509 + MSTB1 LTR MaLR 4 410 -22 1651 119 13 0 chr10 36425256 36425483 -103891282 - MER30 DNA MER1_type 0 230 1 265 171 0 61 chr10 36425563 36425645 -103891120 + T-rich Low_complexity Low_complexity 6 82 0 232 157 0 39 chr10 36425737 36425788 -103890977 + T-rich Low_complexity Low_complexity 6 54 0 300 53 0 0 chr10 36427310 36427348 -103889417 + (CA)n Simple_repeat Simple_repeat 1 38 0 367 172 11 11 chr10 36427366 36427453 -103889312 + (TA)n Simple_repeat Simple_repeat 2 88 0 1911 163 0 0 chr10 36427454 36427742 -103889023 - AluSx SINE Alu -24 288 1 372 259 96 32 chr10 36427844 36427990 -103888775 - MIR SINE MIR -65 143 15 21 82 0 0 chr10 36428358 36428407 -103888358 + AT_rich Low_complexity Low_complexity 1 49 0 1462 177 9 78 chr10 36428413 36428735 -103888030 + AluJo SINE Alu 1 300 -2 283 264 0 47 chr10 36429437 36429464 -103887301 + LTR67 LTR ERVL 457 484 -73 284 229 16 0 chr10 36429464 36429525 -103887240 + MLT1K LTR MaLR 509 570 -18 283 264 0 47 chr10 36429525 36429543 -103887222 + LTR67 LTR ERVL 484 557 0 1863 152 24 3 chr10 36431758 36432048 -103884717 + AluJb SINE Alu 1 296 -16 26 30 0 0 chr10 36432438 36432471 -103884294 + AT_rich Low_complexity Low_complexity 1 33 0 1437 196 0 8 chr10 36432471 36432721 -103884044 - AluJo SINE Alu -64 248 1 514 339 102 39 chr10 36433015 36433827 -103882938 - L2 LINE L2 -475 2839 1977 280 326 21 21 chr10 36433866 36434007 -103882758 - MIR3 SINE MIR -33 175 35 23 0 0 0 chr10 36434341 36434364 -103882401 + AT_rich Low_complexity Low_complexity 1 23 0 4322 131 5 2 chr10 36434751 36435384 -103881381 + MER41B LTR ERV1 1 635 0 207 0 0 0 chr10 36435934 36435957 -103880808 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3564 151 54 72 chr10 36437126 36437926 -103878839 + LTR1 LTR ERV1 1 785 0 4054 127 26 2 chr10 36438318 36438938 -103877827 - MER41B LTR ERV1 0 635 1 2162 116 0 29 chr10 36438979 36439290 -103877475 + AluSq SINE Alu 5 306 -7 500 118 0 0 chr10 36441523 36441591 -103875174 + AluJ/FLAM SINE Alu 17 84 -228 24 0 0 0 chr10 36442412 36442436 -103874329 + AT_rich Low_complexity Low_complexity 1 24 0 2006 139 0 0 chr10 36443507 36443816 -103872949 + AluSx SINE Alu 2 310 0 234 0 0 0 chr10 36444537 36444563 -103872202 + (TG)n Simple_repeat Simple_repeat 1 26 0 265 250 0 0 chr10 36445114 36445211 -103871554 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 915 129 0 0 chr10 36445215 36445339 -103871426 - FLAM_C SINE Alu -18 125 2 2355 103 7 0 chr10 36445674 36445984 -103870781 + AluSx SINE Alu 1 312 0 2380 133 23 16 chr10 36446160 36446545 -103870220 - LTR45B LTR ERV1 -98 391 4 1755 215 37 37 chr10 36446940 36447405 -103869360 - MLT1C LTR MaLR 0 467 3 15075 133 30 15 chr10 36447458 36449645 -103867120 + Tigger1 DNA MER2_type 1 2228 -190 1994 156 7 0 chr10 36449645 36449946 -103866819 - AluSx SINE Alu -7 305 3 15075 133 30 15 chr10 36449946 36450140 -103866625 + Tigger1 DNA MER2_type 2228 2418 0 195 167 104 21 chr10 36452059 36452107 -103864658 - MIR SINE MIR -9 253 202 1746 167 29 4 chr10 36452224 36452505 -103864260 + AluJo SINE Alu 5 292 -20 382 260 97 15 chr10 36452765 36452961 -103863804 - L1MC4a LINE L1 -1894 5914 5703 1854 104 23 68 chr10 36453204 36453513 -103863252 - AluSq SINE Alu -18 295 1 233 252 193 47 chr10 36455150 36455411 -103861354 + L1ME4a LINE L1 5754 6072 -49 2092 121 21 0 chr10 36455411 36455701 -103861064 + AluSx SINE Alu 1 296 -16 233 252 193 47 chr10 36455701 36455760 -103861005 + L1ME4a LINE L1 6072 6121 0 2122 73 24 21 chr10 36455763 36456050 -103860715 + AluY SINE Alu 1 288 -23 194 62 31 0 chr10 36456053 36456085 -103860680 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2074 120 27 3 chr10 36456090 36456390 -103860375 + AluSx SINE Alu 1 307 -5 1870 212 104 103 chr10 36457531 36458223 -103858542 - LTR8A LTR ERV1 -1 726 34 253 283 38 47 chr10 36458343 36458449 -103858316 + MIR3 SINE MIR 85 189 -19 1094 125 0 12 chr10 36458994 36459154 -103857611 - FRAM SINE Alu -9 167 10 1380 186 11 34 chr10 36459165 36459434 -103857331 - AluJb SINE Alu -7 305 43 1345 209 56 48 chr10 36459795 36460135 -103856630 - MER21B LTR ERV1 -1 862 520 1223 195 112 16 chr10 36460135 36460209 -103856556 + LTR39 LTR ERV1 2 67 -716 1909 151 0 24 chr10 36460209 36460507 -103856258 + AluJb SINE Alu 6 296 -16 1223 195 112 16 chr10 36460507 36460770 -103855995 + LTR39 LTR ERV1 67 402 -381 1179 178 26 74 chr10 36460758 36460855 -103855910 + LTR39 LTR ERV1 527 627 -156 * 2147 139 0 3 chr10 36460855 36461165 -103855600 + AluSq SINE Alu 1 309 -4 1179 178 26 74 chr10 36461165 36461337 -103855428 + LTR39 LTR ERV1 627 783 0 1220 199 182 96 chr10 36461344 36461487 -103855278 - MER21B LTR ERV1 -340 523 394 4267 122 8 14 chr10 36461487 36462126 -103854639 - MER41B LTR ERV1 0 635 1 1220 199 182 96 chr10 36462126 36462459 -103854306 - MER21B LTR ERV1 -469 394 6 1865 151 14 0 chr10 36463166 36463469 -103853296 - AluSx SINE Alu 0 307 1 1812 150 0 17 chr10 36464452 36464739 -103852026 + AluJo SINE Alu 2 283 -29 366 302 148 0 chr10 36465947 36466129 -103850636 - MIR SINE MIR -6 256 48 2509 87 0 0 chr10 36466168 36466479 -103850286 - AluSx SINE Alu -1 311 1 216 0 0 0 chr10 36467079 36467103 -103849662 + (CA)n Simple_repeat Simple_repeat 1 24 0 480 71 12 83 chr10 36467378 36467425 -103849340 - MADE1 DNA Mariner -1 79 39 1585 130 153 0 chr10 36467425 36467687 -103849078 + AluSx SINE Alu 1 302 0 480 71 12 83 chr10 36467687 36467723 -103849042 - MADE1 DNA Mariner -41 39 2 457 293 19 56 chr10 36468243 36468321 -103848444 - MIR SINE MIR -44 218 139 2177 100 4 0 chr10 36468321 36468623 -103848142 - AluSx SINE Alu 0 303 1 457 293 19 56 chr10 36468623 36468760 -103848005 - MIR SINE MIR -123 139 13 647 110 53 17 chr10 36469531 36469759 -103847006 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 213 154 0 0 chr10 36470161 36470200 -103846565 + (TG)n Simple_repeat Simple_repeat 1 39 0 973 193 17 0 chr10 36472206 36472387 -103844378 - AluJo SINE Alu -10 302 119 718 183 0 0 chr10 36472422 36472548 -103844217 - AluJo SINE Alu -186 126 1 1499 189 54 4 chr10 36472578 36472858 -103843907 + AluJb SINE Alu 3 296 -16 418 143 0 0 chr10 36473374 36473430 -103843335 - Alu SINE Alu -20 292 237 1892 130 7 0 chr10 36473430 36473700 -103843065 - AluSx SINE Alu -40 272 1 226 343 0 0 chr10 36473821 36473894 -103842871 + L2 LINE L2 3241 3313 0 2057 136 7 0 chr10 36474572 36474880 -103841885 - AluSx SINE Alu 0 312 3 215 260 27 0 chr10 36475331 36475356 -103841409 + (TA)n Simple_repeat Simple_repeat 2 25 -51 2038 129 6 13 chr10 36475356 36475667 -103841098 - AluSx SINE Alu -3 309 1 215 260 27 0 chr10 36475667 36475714 -103841051 + (TA)n Simple_repeat Simple_repeat 25 76 0 863 179 60 0 chr10 36475781 36475932 -103840833 - AluSg/x SINE Alu -16 294 135 1448 236 120 85 chr10 36475973 36476320 -103840445 - MER21B LTR ERV1 -124 739 405 2893 94 6 0 chr10 36476320 36476682 -103840083 - THE1B LTR MaLR 0 364 1 1448 236 120 85 chr10 36476682 36477028 -103839737 - MER21B LTR ERV1 -458 405 22 1777 244 26 24 chr10 36477288 36477746 -103839019 + L1MC4 LINE L1 7335 7793 -249 355 263 35 76 chr10 36477762 36478051 -103838714 + L1MC4 LINE L1 7759 8035 -7 1464 164 52 45 chr10 36478053 36478340 -103838425 + AluJb SINE Alu 1 289 -23 181 349 72 0 chr10 36478580 36478663 -103838102 - L2 LINE L2 -28 3285 3197 2312 107 85 8 chr10 36478837 36479359 -103837406 - MER51A LTR ERV1 -1 633 1 456 104 0 0 chr10 36480452 36480519 -103836246 + (TA)n Simple_repeat Simple_repeat 1 67 0 1589 190 24 10 chr10 36481900 36482190 -103834575 + AluJo SINE Alu 3 296 -16 2117 92 4 0 chr10 36482888 36483193 -103833572 - AluY SINE Alu 0 306 1 2149 111 3 3 chr10 36483257 36483555 -103833210 - AluSg SINE Alu -12 298 1 261 98 0 0 chr10 36484501 36484542 -103832223 + (CA)n Simple_repeat Simple_repeat 2 42 0 3656 104 7 59 chr10 36485913 36486212 -103830553 + LTR26B LTR ERV1 2 260 -271 2227 126 7 0 chr10 36486212 36486522 -103830243 - AluSx SINE Alu 0 312 1 3656 104 7 59 chr10 36486522 36486781 -103829984 + LTR26B LTR ERV1 260 531 0 319 319 151 7 chr10 36487092 36487313 -103829452 - MIR3 SINE MIR -10 252 4 243 310 184 0 chr10 36488974 36489061 -103827704 + L2 LINE L2 3168 3270 -2 23 54 0 0 chr10 36489063 36489100 -103827665 + AT_rich Low_complexity Low_complexity 1 37 0 218 296 19 0 chr10 36489188 36489242 -103827523 + L2 LINE L2 3217 3271 -1 5039 99 19 1 chr10 36490167 36490843 -103825922 + L1PA8 LINE L1 5482 6169 -3 1457 216 83 22 chr10 36490940 36491184 -103825581 - MER110A LTR ERV1 0 468 188 1981 204 91 66 chr10 36491184 36491791 -103824974 - LTR26E LTR ERV1 0 622 1 1457 216 83 22 chr10 36491791 36491953 -103824812 - MER110A LTR ERV1 -280 188 37 2336 93 0 10 chr10 36492108 36492418 -103824347 - AluY SINE Alu -4 307 1 904 181 91 19 chr10 36492638 36492848 -103823917 + MER110A LTR ERV1 1 225 -243 4791 49 3 3 chr10 36493044 36493612 -103823153 + L1PA8 LINE L1 5605 6172 0 509 289 66 16 chr10 36493671 36493913 -103822852 - MER41B LTR ERV1 -205 430 177 797 248 49 0 chr10 36494027 36494253 -103822512 + MER110A LTR ERV1 232 468 0 2394 64 0 0 chr10 36495953 36496260 -103820505 + AluY SINE Alu 1 307 0 21 0 0 0 chr10 36496562 36496583 -103820182 + AT_rich Low_complexity Low_complexity 1 21 0 260 287 28 19 chr10 36497441 36497549 -103819216 - MER110A LTR ERV1 -18 450 342 254 234 69 150 chr10 36497556 36497625 -103819140 - LTR48B LTR ERV1 -11 633 560 2173 129 3 0 chr10 36497625 36497935 -103818830 + AluSx SINE Alu 1 311 -1 1628 118 51 0 chr10 36497936 36498173 -103818592 + AluSp SINE Alu 34 282 -31 207 0 0 0 chr10 36498176 36498199 -103818566 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 234 69 150 chr10 36498199 36498312 -103818453 - LTR48B LTR ERV1 -86 558 471 2507 74 0 0 chr10 36498312 36498611 -103818154 - AluY SINE Alu -12 299 1 254 234 69 150 chr10 36498611 36498695 -103818070 - LTR48B LTR ERV1 -173 471 382 225 274 16 65 chr10 36498774 36498898 -103817867 - LTR48B LTR ERV1 -408 236 119 997 213 90 60 chr10 36498899 36499232 -103817533 - MER110A LTR ERV1 -125 343 1 2207 101 14 3 chr10 36499676 36499973 -103816792 + AluSp SINE Alu 1 300 -13 1813 207 114 51 chr10 36500331 36501068 -103815697 + LTR1B LTR ERV1 1 772 -13 1651 177 0 27 chr10 36501357 36501657 -103815108 + AluJb SINE Alu 1 292 -20 388 271 0 5 chr10 36502119 36502235 -103814530 + MIR SINE MIR 30 143 -65 336 24 0 0 chr10 36502403 36502444 -103814321 + (TG)n Simple_repeat Simple_repeat 2 42 0 2536 94 64 0 chr10 36502830 36503172 -103813593 - THE1B LTR MaLR 0 364 1 1950 154 0 3 chr10 36503200 36503519 -103813246 - AluSx SINE Alu 0 318 1 21 0 0 0 chr10 36503519 36503540 -103813225 + AT_rich Low_complexity Low_complexity 1 21 0 1374 165 0 25 chr10 36503549 36503785 -103812980 - AluJo SINE Alu -20 292 63 321 294 0 22 chr10 36503786 36503802 -103812963 - L1MC4 LINE L1 -1339 6703 6688 315 49 0 0 chr10 36503802 36503843 -103812922 + (CA)n Simple_repeat Simple_repeat 2 42 0 321 294 0 22 chr10 36503843 36503918 -103812847 - L1MC4 LINE L1 -1354 6688 6614 * 333 300 0 0 chr10 36503914 36504004 -103812761 + L1MC4 LINE L1 6614 6703 -1339 2172 123 0 3 chr10 36504009 36504318 -103812447 - AluSq SINE Alu -5 308 1 1228 181 0 0 chr10 36504318 36504517 -103812248 - AluJb SINE Alu -109 203 5 1553 122 30 0 chr10 36504525 36504762 -103812003 - L1PA16 LINE L1 -16 6150 5907 2287 123 0 0 chr10 36505646 36505947 -103810818 + AluSx SINE Alu 1 301 -11 270 0 0 0 chr10 36505947 36505977 -103810788 + (TC)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 36505976 36506003 -103810762 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 187 304 43 0 chr10 36506129 36506198 -103810567 - MIR SINE MIR -74 188 117 2394 133 34 11 chr10 36506575 36506929 -103809836 - THE1B LTR MaLR 0 364 3 12886 80 4 4 chr10 36506933 36508512 -103808253 - THE1B-int LTR MaLR -2 1578 1 2449 130 30 22 chr10 36508512 36508873 -103807892 - THE1B LTR MaLR 0 364 1 493 169 0 0 chr10 36510410 36510487 -103806278 + L1 LINE L1 2662 2738 -3408 841 177 41 0 chr10 36510488 36510635 -103806130 + MSTD LTR MaLR 1 153 -243 27276 40 2 0 chr10 36510638 36511336 -103805429 - L1PA4 LINE L1 0 6155 5460 2207 101 7 3 chr10 36511336 36511633 -103805132 - AluY SINE Alu -13 298 1 27276 40 2 0 chr10 36511633 36514892 -103801873 - L1PA4 LINE L1 -695 5460 2224 15764 69 3 0 chr10 36514892 36516881 -103799884 - L1P LINE L1 -4006 2140 145 1315 170 26 9 chr10 36516882 36517111 -103799654 + MSTD LTR MaLR 164 396 0 3339 186 60 17 chr10 36517111 36517954 -103798811 + L1 LINE L1 2735 3614 -2532 1436 193 33 36 chr10 36517950 36518287 -103798478 + L1MA7 LINE L1 5953 6288 -3 * 216 317 143 50 chr10 36518336 36518595 -103798170 + L2 LINE L2 2974 3256 -16 1986 101 10 57 chr10 36519228 36519565 -103797200 - AluSx SINE Alu 0 323 1 1760 188 26 8 chr10 36519712 36520167 -103796598 - LTR53 LTR ERVL -1 518 9 1355 103 73 90 chr10 36520700 36520813 -103795952 - MER30 DNA MER1_type 0 230 117 1990 147 13 0 chr10 36520813 36521112 -103795653 - AluSx SINE Alu -9 303 1 1355 103 73 90 chr10 36521112 36521232 -103795533 - MER30 DNA MER1_type -113 117 1 309 252 165 0 chr10 36522495 36522598 -103794167 - MER94 DNA DNA 0 134 15 2367 85 0 3 chr10 36523431 36523726 -103793039 - AluSc SINE Alu -15 294 1 476 319 140 36 chr10 36525042 36525399 -103791366 + MLT1I LTR MaLR 1 394 -15 454 287 20 0 chr10 36526727 36526828 -103789937 + L2 LINE L2 3154 3256 -16 200 268 0 0 chr10 36526794 36526835 -103789930 + MIR SINE MIR 219 259 -3 * 2250 115 0 6 chr10 36527093 36527406 -103789359 - AluSx SINE Alu -1 311 1 405 0 0 0 chr10 36527993 36528038 -103788727 + (CA)n Simple_repeat Simple_repeat 1 45 0 400 305 145 48 chr10 36528045 36528349 -103788416 + L2 LINE L2 2745 3090 -223 1837 117 84 47 chr10 36528349 36528647 -103788118 - AluSg SINE Alu 0 310 2 400 305 145 48 chr10 36528647 36528710 -103788055 + L2 LINE L2 3090 3145 -168 280 171 0 29 chr10 36528716 36528786 -103787979 + CT-rich Low_complexity Low_complexity 2 69 0 1633 233 71 9 chr10 36529051 36529489 -103787276 - MLT1C LTR MaLR 0 467 3 1846 158 10 10 chr10 36529642 36529953 -103786812 + AluJo SINE Alu 1 311 -1 250 376 147 6 chr10 36530997 36531154 -103785611 + L3 LINE CR1 1396 1574 -3 1788 160 28 7 chr10 36531471 36531759 -103785006 + AluJo SINE Alu 5 298 -14 270 323 69 15 chr10 36533456 36533586 -103783179 + MER5B DNA MER1_type 7 143 -35 847 168 44 0 chr10 36533950 36534139 -103782626 + AluJb SINE Alu 141 335 0 1998 94 94 7 chr10 36535211 36535499 -103781266 + AluSq SINE Alu 1 313 0 2152 118 3 0 chr10 36537371 36537668 -103779097 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr10 36537674 36537694 -103779071 + (CAA)n Simple_repeat Simple_repeat 2 21 0 418 225 7 196 chr10 36537864 36538033 -103778732 + MIR SINE MIR 18 117 -145 840 125 8 0 chr10 36538033 36538161 -103778604 - L1MA5A LINE L1 -3 6294 6166 418 225 7 196 chr10 36538161 36538267 -103778498 + MIR SINE MIR 117 241 -21 34 84 0 0 chr10 36538650 36538733 -103778032 + AT_rich Low_complexity Low_complexity 1 83 0 2304 106 0 3 chr10 36538882 36539193 -103777572 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 36540901 36540922 -103775843 + AT_rich Low_complexity Low_complexity 1 21 0 610 193 62 35 chr10 36540925 36541070 -103775695 - L1MC1 LINE L1 0 6333 6185 1051 48 42 6 chr10 36542430 36542595 -103774170 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 783 138 0 9 chr10 36542595 36542704 -103774061 - FLAM_C SINE Alu -22 121 14 2056 155 5 39 chr10 36543332 36543719 -103773046 - MSTA LTR MaLR 0 428 55 650 131 0 10 chr10 36543720 36543819 -103772946 + MER4A LTR ERV1 1 98 -566 1711 117 177 76 chr10 36543819 36544186 -103772579 + MER4A LTR ERV1 261 664 0 392 121 17 0 chr10 36544186 36544241 -103772524 - MSTA LTR MaLR -370 56 1 1345 90 51 11 chr10 36544512 36544823 -103771942 - THE1C LTR MaLR 0 375 1 308 306 70 25 chr10 36544851 36545135 -103771630 - L2 LINE L2 -556 2758 2462 2104 159 22 75 chr10 36545317 36545733 -103771032 - MSTD LTR MaLR 0 396 3 430 228 0 22 chr10 36545788 36545880 -103770885 - Tigger5 DNA MER2_type 0 2323 2234 263 186 0 0 chr10 36545887 36545930 -103770835 - Tigger5 DNA MER2_type -2268 55 13 368 189 14 27 chr10 36545930 36546004 -103770761 - Tigger5 DNA MER2_type 0 2323 2251 320 196 0 18 chr10 36545972 36546028 -103770737 - Tigger5 DNA MER2_type -2268 55 1 * 817 192 51 75 chr10 36548300 36548372 -103768393 - MER3 DNA MER1_type 0 209 137 1694 173 3 7 chr10 36548372 36548656 -103768109 + AluJb SINE Alu 10 292 -20 817 192 51 75 chr10 36548656 36548797 -103767968 - MER3 DNA MER1_type -72 137 1 2091 109 20 14 chr10 36549014 36549308 -103767457 + AluSx SINE Alu 1 296 -16 2346 122 48 20 chr10 36549715 36550067 -103766698 + THE1B LTR MaLR 3 364 0 1463 168 35 48 chr10 36550093 36550408 -103766357 - AluJb SINE Alu 0 312 2 354 140 18 0 chr10 36551512 36551569 -103765196 - FLAM SINE Alu -8 125 68 802 203 0 0 chr10 36551570 36551698 -103765067 + AluJ SINE Alu 2 129 -183 253 291 23 0 chr10 36551698 36551784 -103764981 - L1MC4 LINE L1 -1342 6700 6613 311 301 0 0 chr10 36551812 36551895 -103764870 - L1MC4 LINE L1 -1340 6702 6620 2215 72 4 4 chr10 36551898 36552176 -103764589 - AluSp SINE Alu -34 279 2 939 134 82 29 chr10 36552222 36552393 -103764372 + AluJ SINE Alu 132 311 -1 484 153 0 0 chr10 36552401 36552473 -103764292 - AluJ/FLAM SINE Alu -232 80 9 2371 84 7 0 chr10 36553520 36553816 -103762949 - AluSx SINE Alu -14 298 1 1752 171 3 35 chr10 36554045 36554355 -103762410 + AluJb SINE Alu 1 300 -12 285 148 2 0 chr10 36554356 36554410 -103762355 + FLAM_A SINE Alu 81 128 -5 236 125 62 21 chr10 36554941 36554989 -103761776 - MER5A DNA MER1_type -62 127 78 1182 74 0 0 chr10 36554992 36555140 -103761625 - THE1B LTR MaLR -214 150 3 2630 105 14 14 chr10 36555568 36555930 -103760835 - THE1B LTR MaLR -2 362 1 252 131 77 12 chr10 36557407 36557575 -103759190 + (TA)n Simple_repeat Simple_repeat 2 180 0 247 35 0 0 chr10 36557634 36557663 -103759102 - Alu SINE Alu -195 107 79 186 107 54 0 chr10 36557713 36557769 -103758996 + (TA)n Simple_repeat Simple_repeat 2 60 0 249 61 41 20 chr10 36557788 36557837 -103758928 + (TA)n Simple_repeat Simple_repeat 2 51 0 247 35 0 0 chr10 36557852 36557881 -103758884 - Alu SINE Alu -195 107 79 414 113 0 0 chr10 36557943 36557996 -103758769 - AluJ/FLAM SINE Alu -249 63 11 192 259 293 26 chr10 36558291 36558407 -103758358 + MER5B DNA MER1_type 32 178 0 2619 154 18 37 chr10 36558615 36559010 -103757755 + MSTA LTR MaLR 1 389 -39 2162 141 0 0 chr10 36559010 36559322 -103757443 - AluSx SINE Alu 0 312 1 2619 154 18 37 chr10 36559322 36559362 -103757403 + MSTA LTR MaLR 389 428 0 900 152 0 0 chr10 36559572 36559710 -103757055 - FRAM SINE Alu -7 169 32 188 325 90 54 chr10 36560028 36560194 -103756571 + L2 LINE L2 2856 3027 -245 2751 165 6 30 chr10 36561471 36561688 -103755077 + LOR1b LTR ERV1 1 222 -239 1974 124 0 4 chr10 36561688 36561963 -103754802 - AluSx SINE Alu -10 302 29 2751 165 6 30 chr10 36561963 36562217 -103754548 + LOR1b LTR ERV1 222 461 0 779 205 87 19 chr10 36564779 36564940 -103751825 + FAM SINE Alu 1 172 -3 1266 116 0 0 chr10 36564940 36565113 -103751652 + L1MA1 LINE L1 5588 5760 -544 239 114 45 23 chr10 36565149 36565187 -103751578 - L1MA1 LINE L1 -545 5757 5718 4312 64 4 13 chr10 36565187 36565736 -103751029 + L1MA1 LINE L1 5759 6302 0 391 245 10 10 chr10 36565939 36566037 -103750728 + MER91B DNA MER1_type 32 129 -61 21 0 0 0 chr10 36566138 36566159 -103750606 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 167 24 chr10 36566445 36566529 -103750236 + MIR3 SINE MIR 82 177 -31 3127 217 33 33 chr10 36566691 36567389 -103749376 - L1ME1 LINE L1 -23 6537 5836 2286 137 30 35 chr10 36567389 36567755 -103749010 - THE1B LTR MaLR 0 364 1 3127 217 33 33 chr10 36567755 36568401 -103748364 - L1ME1 LINE L1 -724 5836 5192 1337 239 87 9 chr10 36568390 36568818 -103747947 - L1ME1 LINE L1 -3626 2914 2455 * 432 277 10 0 chr10 36568859 36568960 -103747805 - L2 LINE L2 -36 3277 3176 3250 233 128 62 chr10 36569028 36570181 -103746584 - L1ME1 LINE L1 -5172 1371 142 414 256 31 0 chr10 36570183 36570312 -103746453 - L1MEc LINE L1 -4243 2153 2021 490 116 0 45 chr10 36570312 36570424 -103746341 + (TA)n Simple_repeat Simple_repeat 1 107 0 2269 76 0 7 chr10 36570424 36570736 -103746029 - AluSp SINE Alu 0 313 1 1981 254 67 24 chr10 36570736 36572541 -103744224 - L1MEc LINE L1 -4379 2017 113 * 4933 131 46 50 chr10 36572523 36572843 -103743922 - L1PA16 LINE L1 -3 6163 5843 1949 119 48 7 chr10 36572843 36573136 -103743629 + AluSq SINE Alu 1 305 -8 4933 131 46 50 chr10 36573136 36573388 -103743377 - L1PA16 LINE L1 -323 5843 5592 2139 116 7 0 chr10 36573388 36573680 -103743085 - AluSg SINE Alu -16 294 1 4933 131 46 50 chr10 36573680 36574014 -103742751 - L1PA16 LINE L1 -574 5592 5259 3029 84 17 0 chr10 36573988 36574393 -103742372 - L1PA10 LINE L1 -5 6163 5752 * 667 194 0 0 chr10 36574393 36574527 -103742238 + L1 LINE L1 5179 5312 -834 205 262 8 87 chr10 36574559 36574685 -103742080 - L2 LINE L2 -729 2585 2470 4651 218 14 8 chr10 36574741 36575777 -103740988 - L1PA16 LINE L1 -860 5286 4244 3786 139 4 0 chr10 36576643 36577168 -103739597 - MER1A DNA MER1_type 0 527 1 2121 124 0 3 chr10 36577236 36577526 -103739239 + AluSx SINE Alu 1 289 -23 1043 308 35 20 chr10 36578285 36578736 -103738029 + L1MC4a LINE L1 5533 5990 -1818 1701 180 31 0 chr10 36578746 36579035 -103737730 + AluJo SINE Alu 1 298 -14 31 68 0 0 chr10 36579152 36579211 -103737554 + AT_rich Low_complexity Low_complexity 1 59 0 1461 161 43 8 chr10 36580123 36580378 -103736387 + AluJb SINE Alu 28 291 -21 2579 188 128 67 chr10 36581172 36581950 -103734815 - LTR1B LTR ERV1 0 826 1 2196 249 4 8 chr10 36582242 36582727 -103734038 - MER21B LTR ERV1 -369 494 12 851 184 168 26 chr10 36582833 36583023 -103733742 - MER21B-int LTR ERV1 -52 4139 3923 1047 240 80 47 chr10 36583023 36583385 -103733380 - LTR40c LTR ERVL -58 407 34 3315 155 13 35 chr10 36583451 36583857 -103732908 - LTR26B LTR ERV1 0 531 135 2187 116 0 7 chr10 36583857 36584179 -103732586 + AluSq SINE Alu 1 320 0 3315 155 13 35 chr10 36584179 36584312 -103732453 - LTR26B LTR ERV1 -396 135 1 506 254 169 5 chr10 36584426 36584615 -103732150 - MIR SINE MIR -17 245 26 4770 79 55 43 chr10 36584914 36585113 -103731652 + L1MA2 LINE L1 5573 5768 -536 2318 134 61 3 chr10 36585113 36585457 -103731308 + THE1B LTR MaLR 1 364 0 4770 79 55 43 chr10 36585457 36585980 -103730785 + L1MA2 LINE L1 5768 6304 0 1878 207 158 58 chr10 36586596 36587313 -103729452 + LTR1B LTR ERV1 1 980 -40 1480 154 61 65 chr10 36587718 36587915 -103728850 - AluJo SINE Alu 0 316 119 186 103 0 0 chr10 36587915 36587944 -103728821 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1480 154 61 65 chr10 36587944 36588059 -103728706 - AluJo SINE Alu -197 119 5 2027 128 3 3 chr10 36588377 36588665 -103728100 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 36588985 36589006 -103727759 + AT_rich Low_complexity Low_complexity 1 21 0 580 246 31 52 chr10 36589301 36589492 -103727273 + MIR3 SINE MIR 19 205 -3 2813 130 9 7 chr10 36589827 36590258 -103726507 + L1MA3 LINE L1 5874 6305 0 1155 203 60 18 chr10 36592908 36593187 -103723578 - MER58B DNA MER1_type -9 332 1 2343 163 69 12 chr10 36593222 36593627 -103723138 - MSTC LTR MaLR 0 428 1 582 54 0 0 chr10 36594258 36594332 -103722433 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1891 138 22 0 chr10 36594335 36594610 -103722155 - AluSq SINE Alu -32 281 1 184 333 120 19 chr10 36594763 36594871 -103721894 - MER5A DNA MER1_type -31 158 40 370 268 49 32 chr10 36595011 36595122 -103721643 + MIR SINE MIR 9 124 -138 4812 65 2 0 chr10 36595122 36595675 -103721090 + MER41A LTR ERV1 1 554 0 370 268 49 32 chr10 36595675 36595686 -103721079 + MIR SINE MIR 124 133 -129 571 130 30 0 chr10 36596326 36596419 -103720346 - L1PB1 LINE L1 -694 5457 5359 5189 97 21 8 chr10 36596419 36596774 -103719991 + L1PB1 LINE L1 5429 5778 -373 363 44 0 0 chr10 36596774 36596819 -103719946 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 97 21 8 chr10 36596819 36597172 -103719593 + L1PB1 LINE L1 5778 6147 -4 571 130 30 0 chr10 36597172 36597217 -103719548 - L1P5 LINE L1 -792 5359 5317 763 172 29 77 chr10 36597321 36597530 -103719235 + MER106A DNA MER1_type 35 233 -3 2162 117 0 10 chr10 36599245 36599544 -103717221 + AluSg SINE Alu 1 296 -14 234 0 0 0 chr10 36599728 36599754 -103717011 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 648 242 12 36 chr10 36603081 36603246 -103713519 - MER45A DNA AcHobo -2 176 16 2315 141 21 50 chr10 36603732 36603978 -103712787 - L1MA4A LINE L1 -7 6296 6065 1688 149 0 57 chr10 36603978 36604279 -103712486 + AluJo SINE Alu 11 294 -18 2315 141 21 50 chr10 36604279 36604452 -103712313 - L1MA4A LINE L1 -238 6065 5889 505 182 30 20 chr10 36604705 36604804 -103711961 + LTR24B LTR ERV1 4 103 -473 1572 55 92 37 chr10 36604860 36605078 -103711687 + MER30 DNA MER1_type 1 230 0 672 279 46 14 chr10 36605117 36605432 -103711333 + LTR24B LTR ERV1 145 569 0 2156 136 0 0 chr10 36606058 36606360 -103710405 + AluSx SINE Alu 1 302 -10 253 307 36 44 chr10 36607020 36607157 -103709608 + L3 LINE CR1 1416 1551 -26 215 196 39 0 chr10 36607160 36607211 -103709554 + GA-rich Low_complexity Low_complexity 2 54 0 26 30 0 0 chr10 36607409 36607442 -103709323 + AT_rich Low_complexity Low_complexity 1 33 0 717 275 48 70 chr10 36607894 36608265 -103708500 + L1ME4a LINE L1 5560 5922 -199 248 324 157 0 chr10 36608324 36608432 -103708333 + L2 LINE L2 3148 3272 0 3440 110 46 24 chr10 36608585 36609085 -103707680 - MER9 LTR ERVK 0 511 1 27 0 0 0 chr10 36609619 36609646 -103707119 + AT_rich Low_complexity Low_complexity 1 27 0 3007 83 3 0 chr10 36609883 36610246 -103706519 - THE1B LTR MaLR 0 364 1 237 222 74 49 chr10 36611425 36611506 -103705259 + MIR SINE MIR 19 101 -107 696 266 47 10 chr10 36611553 36611745 -103705020 + MIR SINE MIR 64 262 0 231 301 60 24 chr10 36611766 36611849 -103704916 + MIR3 SINE MIR 114 199 -9 1560 180 54 0 chr10 36611888 36612043 -103704722 - AluJo SINE Alu -19 293 148 189 0 0 0 chr10 36612043 36612064 -103704701 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36612064 36612186 -103704579 - AluJo SINE Alu -164 148 1 2054 123 7 14 chr10 36612270 36612563 -103704202 + AluSx SINE Alu 1 291 -21 813 207 86 94 chr10 36613377 36613692 -103703073 - L2 LINE L2 -239 3074 2758 1046 219 13 26 chr10 36613701 36613780 -103702985 + AluJo SINE Alu 61 140 -172 2115 111 4 0 chr10 36613780 36614082 -103702683 + AluSc SINE Alu 1 303 0 1046 219 13 26 chr10 36614082 36614234 -103702531 + AluJo SINE Alu 140 290 -22 775 143 0 0 chr10 36614260 36614365 -103702400 - AluJo SINE Alu -44 268 164 751 173 0 0 chr10 36614373 36614483 -103702282 - AluJo SINE Alu -201 111 2 2234 287 95 35 chr10 36614490 36615652 -103701113 - L2 LINE L2 -568 2746 1516 2387 74 7 3 chr10 36616426 36616722 -103700043 + AluY SINE Alu 1 297 -14 2431 103 0 0 chr10 36616765 36617077 -103699688 - AluSq SINE Alu -1 312 1 561 297 73 82 chr10 36617806 36618381 -103698384 - L1ME4a LINE L1 -223 5898 5329 487 303 123 23 chr10 36618930 36619280 -103697485 - MLT1I LTR MaLR 0 409 25 6035 102 9 14 chr10 36619313 36620201 -103696564 - L1PB1 LINE L1 -1 6150 5267 227 384 42 5 chr10 36620566 36620782 -103695983 - L1ME4a LINE L1 -1178 4968 4745 2129 125 3 10 chr10 36620819 36621124 -103695641 - AluSx SINE Alu -9 303 1 364 349 99 54 chr10 36621379 36621782 -103694983 - L2 LINE L2 -229 3043 2627 1762 91 9 0 chr10 36621784 36622014 -103694751 - Charlie3 DNA MER1_type -5 2705 2474 1565 119 0 0 chr10 36622099 36622301 -103694464 - AluSg/x SINE Alu -16 296 95 186 43 0 0 chr10 36622455 36622478 -103694287 + (TC)n Simple_repeat Simple_repeat 2 24 0 2191 118 0 3 chr10 36622478 36622774 -103693991 - AluSx SINE Alu -17 295 1 409 265 60 13 chr10 36622965 36623116 -103693649 + MER103 DNA DNA 3 160 -6 12959 117 61 30 chr10 36623117 36624012 -103692753 - Tigger1 DNA MER2_type 0 2418 1553 2519 57 3 0 chr10 36624012 36624313 -103692452 - AluY SINE Alu -9 302 1 12959 117 61 30 chr10 36624313 36625156 -103691609 - Tigger1 DNA MER2_type -865 1553 738 2370 86 0 7 chr10 36625156 36625460 -103691305 - AluY SINE Alu -9 302 1 12959 117 61 30 chr10 36625460 36625787 -103690978 - Tigger1 DNA MER2_type -1680 738 423 2069 121 7 0 chr10 36625787 36626076 -103690689 + AluSx SINE Alu 5 295 -17 12959 117 61 30 chr10 36626076 36626335 -103690430 - Tigger1 DNA MER2_type -1995 423 3 729 198 0 0 chr10 36626361 36626482 -103690283 + FRAM SINE Alu 46 166 -10 210 316 44 21 chr10 36627763 36627863 -103688902 - MIR SINE MIR -63 145 45 1885 173 0 3 chr10 36628039 36628351 -103688414 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 36628913 36628934 -103687831 + AT_rich Low_complexity Low_complexity 1 21 0 860 86 13 26 chr10 36629651 36629802 -103686963 + (TTTC)n Simple_repeat Simple_repeat 2 150 0 243 276 0 0 chr10 36630315 36630373 -103686392 + L2 LINE L2 3247 3304 -9 1435 226 77 24 chr10 36630500 36630995 -103685770 - L1ME4a LINE L1 -3 6118 5598 2118 134 0 0 chr10 36631190 36631488 -103685277 + AluSx SINE Alu 1 298 -14 190 256 37 37 chr10 36631504 36631586 -103685179 + MIR SINE MIR 31 112 -150 894 276 105 44 chr10 36631624 36631849 -103684916 + MLT1J LTR MaLR 5 215 -296 2629 120 38 31 chr10 36631849 36632274 -103684491 + MSTA LTR MaLR 1 428 0 894 276 105 44 chr10 36632274 36632523 -103684242 + MLT1J LTR MaLR 215 508 -3 180 0 0 0 chr10 36633504 36633524 -103683241 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2104 131 0 0 chr10 36633527 36633810 -103682955 - AluSq SINE Alu -30 283 1 297 324 122 19 chr10 36634792 36635005 -103681760 + L2 LINE L2 1721 1955 -1359 3961 186 19 23 chr10 36635067 36635859 -103680906 - L1MB8 LINE L1 -6 6172 5384 864 258 22 0 chr10 36635861 36636136 -103680629 - L1MB8 LINE L1 -844 5302 5022 245 241 0 0 chr10 36636186 36636244 -103680521 + L1M4 LINE L1 5022 5079 -1067 400 210 0 0 chr10 36636248 36636329 -103680436 - L1MB8 LINE L1 -1125 5021 4941 1474 59 21 0 chr10 36636750 36636936 -103679829 + L1MA1 LINE L1 6112 6301 -1 247 327 39 10 chr10 36637261 36637365 -103679400 - L2 LINE L2 -1 3312 3206 1473 193 37 20 chr10 36639192 36639365 -103677400 - AluJo SINE Alu -12 300 118 208 0 0 59 chr10 36639365 36639399 -103677366 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1473 193 37 20 chr10 36639399 36639520 -103677245 - AluJo SINE Alu -194 118 1 195 129 0 0 chr10 36644230 36644261 -103672504 + (TG)n Simple_repeat Simple_repeat 2 32 0 4316 148 91 3 chr10 36645236 36645995 -103670770 - LTR1B LTR ERV1 0 826 1 1970 126 0 0 chr10 36648204 36648474 -103668291 - AluSg SINE Alu -2 308 39 1912 165 0 16 chr10 36648488 36648803 -103667962 - AluJo SINE Alu -2 310 1 188 246 66 49 chr10 36648945 36649006 -103667759 + MIR SINE MIR 76 137 -71 2400 92 0 7 chr10 36650035 36650339 -103666426 - AluSg SINE Alu -8 302 1 2533 69 0 0 chr10 36650365 36650669 -103666096 + AluY SINE Alu 1 304 -7 398 304 109 11 chr10 36650718 36650902 -103665863 + MIR SINE MIR 37 238 -24 4105 57 38 6 chr10 36651932 36652437 -103664328 - L1PA8 LINE L1 0 6172 5652 369 109 0 0 chr10 36652542 36652597 -103664168 + (CA)n Simple_repeat Simple_repeat 2 56 0 340 173 49 0 chr10 36652905 36652986 -103663779 + L1MB4 LINE L1 6095 6179 -1 4142 191 31 14 chr10 36653116 36653886 -103662879 - LTR39 LTR ERV1 0 783 1 666 214 0 7 chr10 36654278 36654553 -103662212 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 1407 184 74 13 chr10 36654582 36654881 -103661884 + LTR52 LTR ERVL 102 418 -3 403 307 21 37 chr10 36655374 36655563 -103661202 - MLT1K LTR MaLR 0 588 403 895 181 0 0 chr10 36655841 36655974 -103660791 + FLAM_A SINE Alu 1 133 0 2866 114 13 37 chr10 36656478 36656694 -103660071 + L1MA4A LINE L1 5854 6074 -229 2229 129 0 0 chr10 36656694 36657003 -103659762 - AluSx SINE Alu -3 309 1 2866 114 13 37 chr10 36657003 36657240 -103659525 + L1MA4A LINE L1 6074 6296 -7 1485 168 6 128 chr10 36657262 36657589 -103659176 + AluJb SINE Alu 1 287 -15 2574 118 34 34 chr10 36659242 36659442 -103657323 - L1MA8 LINE L1 -5 6286 6087 2344 86 7 0 chr10 36659442 36659743 -103657022 - AluSx SINE Alu -5 307 5 2574 118 34 34 chr10 36659743 36659981 -103656784 - L1MA8 LINE L1 -203 6088 5848 2288 136 33 25 chr10 36660047 36660408 -103656357 - THE1B LTR MaLR 0 364 1 324 163 5 0 chr10 36660581 36660642 -103656123 + MIR SINE MIR 97 160 -48 2319 89 0 3 chr10 36660729 36661033 -103655732 + AluY SINE Alu 1 303 -8 2641 190 17 0 chr10 36661348 36661821 -103654944 + MLT2B1 LTR ERVL 1 481 -39 1057 160 5 5 chr10 36661821 36662008 -103654757 + MLT1A1 LTR MaLR 1 187 -178 3881 124 71 57 chr10 36662009 36662158 -103654607 - MER50 LTR ERV1 -23 711 566 1537 202 10 24 chr10 36662158 36662296 -103654469 + AluJb SINE Alu 1 139 -175 429 36 0 0 chr10 36662296 36662351 -103654414 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1537 202 10 24 chr10 36662351 36662530 -103654235 + AluJb SINE Alu 139 314 0 3881 124 71 57 chr10 36662530 36663078 -103653687 - MER50 LTR ERV1 -168 566 1 983 192 16 22 chr10 36663079 36663261 -103653504 + MLT1A1 LTR MaLR 185 365 0 226 210 34 143 chr10 36663336 36663396 -103653369 + MIR SINE MIR 42 84 -178 1996 139 14 0 chr10 36663396 36663691 -103653074 - AluSg SINE Alu -11 299 1 226 210 34 143 chr10 36663691 36663749 -103653016 + MIR SINE MIR 84 147 -115 2122 125 6 10 chr10 36663753 36664065 -103652700 - AluSq SINE Alu -2 311 1 2447 214 91 12 chr10 36665701 36666298 -103650467 - LTR48B LTR ERV1 0 644 1 246 279 15 15 chr10 36666879 36666947 -103649818 + tRNA-Ile-ATT tRNA tRNA 5 72 -5 258 32 0 0 chr10 36667571 36667602 -103649163 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1989 151 0 0 chr10 36667605 36667889 -103648876 - AluSx SINE Alu -28 284 1 1796 169 0 10 chr10 36667929 36668230 -103648535 - AluJb SINE Alu -14 298 1 7023 55 0 81 chr10 36668273 36669705 -103647060 + L1PA7 LINE L1 4800 6153 -1 1547 147 74 53 chr10 36671002 36671141 -103645624 + LTR8A LTR ERV1 1 136 -591 413 76 15 0 chr10 36671141 36671207 -103645558 + (TA)n Simple_repeat Simple_repeat 2 68 0 2031 140 7 0 chr10 36671207 36671492 -103645273 - AluSx SINE Alu -23 289 3 2153 124 0 3 chr10 36671498 36671796 -103644969 - AluSq SINE Alu -16 297 1 1547 147 74 53 chr10 36671796 36672282 -103644483 + LTR8A LTR ERV1 140 727 0 25 31 0 0 chr10 36672454 36672486 -103644279 + AT_rich Low_complexity Low_complexity 1 32 0 234 357 24 0 chr10 36672506 36672590 -103644175 + MIR3 SINE MIR 114 199 -9 2344 106 0 6 chr10 36672798 36673109 -103643656 - AluSx SINE Alu -3 309 1 442 158 0 13 chr10 36673117 36673193 -103643572 - Alu SINE Alu -2 309 235 1067 124 0 11 chr10 36673196 36673281 -103643484 + (GAAA)n Simple_repeat Simple_repeat 1 260 0 1067 124 0 11 chr10 36673281 36673459 -103643306 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 297 310 168 61 chr10 36673547 36673636 -103643129 - L2 LINE L2 -448 2866 2788 2050 148 0 7 chr10 36673636 36673941 -103642824 + AluJb SINE Alu 1 303 -9 297 310 168 61 chr10 36673941 36674671 -103642094 - L2 LINE L2 -526 2788 1959 6093 117 16 27 chr10 36674797 36675710 -103641055 + MER4D LTR ERV1 1 903 0 2391 99 0 3 chr10 36675760 36676072 -103640693 + AluSq SINE Alu 1 311 -2 570 238 2 2 chr10 36676382 36676794 -103639971 + CT-rich Low_complexity Low_complexity 1 412 0 1565 200 10 0 chr10 36677354 36677644 -103639121 - AluJo SINE Alu -19 293 1 685 240 72 87 chr10 36678038 36678384 -103638381 + MER102b DNA MER1_type 1 341 0 1209 162 121 62 chr10 36678478 36678750 -103638015 + AluJo SINE Alu 5 292 -20 303 290 130 0 chr10 36679037 36679137 -103637628 - MER117 DNA MER1_type -51 146 34 230 293 46 81 chr10 36679303 36679477 -103637288 + L3 LINE CR1 795 962 -615 2293 90 0 0 chr10 36680161 36680460 -103636305 + AluSq SINE Alu 1 299 -14 1865 94 0 42 chr10 36680826 36680949 -103635816 + L1MA1 LINE L1 6027 6154 -148 1519 96 50 5 chr10 36680949 36681168 -103635597 + MER30 DNA MER1_type 2 230 0 1865 94 0 42 chr10 36681168 36681332 -103635433 + L1MA1 LINE L1 6154 6302 0 27 0 0 0 chr10 36681332 36681359 -103635406 + AT_rich Low_complexity Low_complexity 1 27 0 285 29 0 0 chr10 36681798 36681832 -103634933 + (CA)n Simple_repeat Simple_repeat 1 34 0 245 108 27 0 chr10 36682529 36682566 -103634199 + Alu SINE Alu 124 161 -14 216 0 0 0 chr10 36683134 36683158 -103633607 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1283 202 49 0 chr10 36683162 36683310 -103633455 - AluJo SINE Alu -32 280 141 180 111 0 0 chr10 36683310 36683337 -103633428 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1283 202 49 0 chr10 36683337 36683455 -103633310 - AluJo SINE Alu -171 141 1 180 111 0 0 chr10 36683458 36683485 -103633280 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 663 148 9 0 chr10 36683491 36683599 -103633166 - FLAM_A SINE Alu -30 112 4 337 179 60 12 chr10 36683929 36684013 -103632752 + MLT2B3 LTR ERVL 6 93 -461 1943 183 55 103 chr10 36684050 36684591 -103632174 + MLT2B1 LTR ERVL 6 520 0 3149 98 18 16 chr10 36684658 36685108 -103631657 - L1PA11 LINE L1 -2 6172 5722 290 306 60 37 chr10 36685113 36685247 -103631518 - MIR SINE MIR -123 139 3 199 246 70 53 chr10 36686069 36686126 -103630639 - MIR SINE MIR -57 151 94 183 205 0 0 chr10 36686318 36686357 -103630408 + (CA)n Simple_repeat Simple_repeat 2 40 0 2059 110 0 19 chr10 36686430 36686738 -103630027 - AluSx SINE Alu -10 302 1 21 71 0 0 chr10 36686965 36687007 -103629758 + AT_rich Low_complexity Low_complexity 1 42 0 256 216 216 102 chr10 36688399 36688723 -103628042 + MLT1K LTR MaLR 219 579 -9 1271 237 127 29 chr10 36689315 36689732 -103627033 + MLT1J LTR MaLR 1 458 -53 225 0 0 0 chr10 36689732 36689757 -103627008 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 798 217 0 0 chr10 36689759 36689902 -103626863 - FRAM SINE Alu -30 146 4 2173 106 0 7 chr10 36690301 36690603 -103626162 - AluSx SINE Alu -12 300 1 428 265 47 77 chr10 36691244 36691303 -103625462 + MIR SINE MIR 41 100 -162 1733 138 0 51 chr10 36691303 36691614 -103625151 - AluSx SINE Alu -17 295 1 428 265 47 77 chr10 36691614 36691724 -103625041 + MIR SINE MIR 100 205 -57 1367 203 13 16 chr10 36691732 36692037 -103624728 + AluJb SINE Alu 1 304 -8 1540 170 3 20 chr10 36693147 36693441 -103623324 - AluJb SINE Alu -23 289 1 1013 131 0 19 chr10 36693529 36693689 -103623076 + FRAM SINE Alu 16 172 -4 236 180 80 0 chr10 36695109 36695159 -103621606 + L2 LINE L2 3251 3304 -9 728 223 159 51 chr10 36695640 36695936 -103620829 + MER57A LTR ERV1 59 386 -17 691 197 0 0 chr10 36695937 36696054 -103620711 + FLAM_C SINE Alu 15 131 -12 1760 169 13 0 chr10 36696537 36696845 -103619920 - AluJo SINE Alu 0 312 1 8734 117 87 23 chr10 36698057 36699539 -103617226 + pTR5 LTR ERV1 504 8396 -3 340 206 51 61 chr10 36699539 36699637 -103617128 + LTR30 LTR ERV1 375 624 -98 1514 134 0 5 chr10 36699641 36699864 -103616901 + pTR5 LTR ERV1 173 394 -2044 705 199 0 15 chr10 36699879 36700010 -103616755 - FLAM_C SINE Alu -2 131 3 1754 163 17 3 chr10 36700016 36700305 -103616460 - AluJb SINE Alu -19 293 1 1968 131 7 0 chr10 36700309 36700606 -103616159 - AluSq SINE Alu -14 299 1 369 329 41 20 chr10 36700731 36700877 -103615888 - MER5A DNA MER1_type -1 188 40 * 605 259 6 19 chr10 36700747 36700905 -103615860 + MER5A DNA MER1_type 34 189 0 203 146 0 42 chr10 36700957 36701005 -103615760 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 2270 100 3 0 chr10 36701219 36701530 -103615235 - AluSx SINE Alu 0 312 1 414 231 22 52 chr10 36701678 36701812 -103614953 + L1MC4 LINE L1 7783 7912 -130 216 184 0 0 chr10 36701816 36701865 -103614900 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 1275 187 97 8 chr10 36701911 36702179 -103614586 + AluJo SINE Alu 1 292 -20 990 149 12 6 chr10 36702180 36702341 -103614424 + AluJo/FRAM SINE Alu 134 295 -17 22 0 0 0 chr10 36702409 36702431 -103614334 + AT_rich Low_complexity Low_complexity 1 22 0 2121 116 0 16 chr10 36702665 36702976 -103613789 - AluSg SINE Alu -4 306 1 1632 194 167 12 chr10 36703893 36704173 -103612592 + MLT1D LTR MaLR 3 238 -267 2189 92 16 0 chr10 36704173 36704478 -103612287 + AluSq SINE Alu 1 310 -3 1632 194 167 12 chr10 36704478 36704629 -103612136 + MLT1D LTR MaLR 238 501 -4 1641 181 0 7 chr10 36704710 36704992 -103611773 + AluJo SINE Alu 17 296 -16 2065 126 0 0 chr10 36705420 36705730 -103611035 + AluSx SINE Alu 1 310 -2 1740 168 0 3 chr10 36705757 36706064 -103610701 + AluJb SINE Alu 1 306 0 193 145 116 58 chr10 36706468 36706537 -103610228 - L2 LINE L2 -76 3237 3165 1651 182 0 25 chr10 36706945 36707264 -103609501 - AluJo SINE Alu -1 311 1 1606 150 66 3 chr10 36707589 36707876 -103608889 + AluSx SINE Alu 1 305 -7 5827 72 18 6 chr10 36708222 36708998 -103607767 - L1PA10 LINE L1 -11 6157 5373 842 132 29 0 chr10 36712583 36712719 -103604046 + L1MA3 LINE L1 6166 6305 0 2066 111 6 43 chr10 36713749 36714073 -103602692 + AluSq SINE Alu 1 312 -1 875 82 8 0 chr10 36714238 36714372 -103602393 + (TTGG)n Simple_repeat Simple_repeat 1 135 0 363 240 23 16 chr10 36715089 36715218 -103601547 + (CAAA)n Simple_repeat Simple_repeat 2 131 0 2706 216 201 72 chr10 36715218 36715733 -103601032 + L1MC4 LINE L1 6487 6934 -1108 2495 129 36 17 chr10 36715733 36716151 -103600614 + MSTA LTR MaLR 1 426 -2 2706 216 201 72 chr10 36716151 36716717 -103600048 + L1MC4 LINE L1 6934 7426 -616 4243 69 4 0 chr10 36716717 36717256 -103599509 - L1PA6 LINE L1 -2 6152 5612 2706 216 201 72 chr10 36717256 36717363 -103599402 + L1MC4 LINE L1 7426 7518 -524 1790 140 0 0 chr10 36717363 36717670 -103599095 + AluJo SINE Alu 5 311 0 2706 216 201 72 chr10 36717670 36717743 -103599022 + L1MC4 LINE L1 7518 7914 -128 302 219 8 118 chr10 36718242 36718361 -103598404 - MIR SINE MIR -77 185 80 812 150 53 0 chr10 36718371 36718504 -103598261 + AluJo SINE Alu 14 153 -159 4087 129 73 91 chr10 36718504 36719476 -103597289 + pTR5 LTR ERV1 743 2025 -413 383 198 0 0 chr10 36719476 36719557 -103597208 + LTR30 LTR ERV1 544 624 -98 1581 91 5 5 chr10 36719577 36719798 -103596967 + pTR5 LTR ERV1 172 392 -2046 694 177 0 23 chr10 36719809 36719939 -103596826 + FRAM SINE Alu 42 168 -8 1631 169 3 10 chr10 36720461 36720751 -103596014 - AluJo SINE Alu -24 288 1 321 315 0 0 chr10 36721163 36721252 -103595513 - L2 LINE L2 0 3272 3184 1706 85 31 0 chr10 36721678 36721901 -103594864 - MER30 DNA MER1_type 0 230 1 1889 153 16 3 chr10 36722643 36722950 -103593815 + AluSx SINE Alu 1 311 -1 526 195 141 16 chr10 36722991 36723152 -103593613 - MER5A DNA MER1_type -1 188 5 2128 121 0 0 chr10 36723544 36723842 -103592923 - AluSx SINE Alu -10 302 5 208 0 62 0 chr10 36724137 36724169 -103592596 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 864 127 0 0 chr10 36724173 36724291 -103592474 - FLAM_C SINE Alu -15 118 1 567 275 144 0 chr10 36724611 36724771 -103591994 + MER5A DNA MER1_type 7 189 0 344 272 141 28 chr10 36725693 36725906 -103590859 + L1MEd LINE L1 659 895 -5310 487 281 100 40 chr10 36725942 36726200 -103590565 + L1MEd LINE L1 1139 1380 -5016 5231 55 3 0 chr10 36726200 36726837 -103589928 + L1PA7 LINE L1 5515 6153 -1 487 281 100 40 chr10 36726837 36727059 -103589706 + L1MEd LINE L1 1380 1648 -4748 340 192 202 10 chr10 36727212 36727311 -103589454 - MER5C DNA MER1_type -200 124 7 2078 138 39 33 chr10 36728483 36728845 -103587920 + THE1B LTR MaLR 1 364 0 229 267 0 83 chr10 36729440 36729560 -103587205 - LTR67 LTR ERVL -13 544 435 2121 121 0 30 chr10 36729564 36729869 -103586896 + AluSq SINE Alu 11 306 -7 1454 215 3 29 chr10 36730088 36730400 -103586365 - AluJo SINE Alu -8 304 1 36765 101 15 9 chr10 36730633 36736747 -103580018 + L1PA7 LINE L1 11 6154 0 1876 159 26 7 chr10 36736760 36737251 -103579514 + AluJb SINE Alu 1 497 0 516 275 142 32 chr10 36738012 36738449 -103578316 + MLT1J LTR MaLR 6 510 -1 1783 189 0 13 chr10 36739305 36739618 -103577147 + AluJb SINE Alu 1 309 -3 2168 123 29 9 chr10 36739633 36739975 -103576790 + MLT1A1 LTR MaLR 15 363 -2 291 297 22 0 chr10 36739987 36740078 -103576687 - MLT1L LTR MaLR -49 566 474 225 245 38 0 chr10 36740222 36740275 -103576490 - MLT1L LTR MaLR -356 259 205 437 129 0 0 chr10 36740660 36740722 -103576043 + AluS SINE Alu 5 66 -247 338 129 94 47 chr10 36740872 36740957 -103575808 + LTR67 LTR ERVL 462 550 -7 206 316 79 0 chr10 36742796 36742872 -103573893 + L2 LINE L2 3191 3272 -41 860 136 38 0 chr10 36743252 36743384 -103573381 + AluSg/x SINE Alu 101 237 -73 1748 213 54 26 chr10 36745522 36745789 -103570976 + L1ME2 LINE L1 5504 5791 -373 2122 132 0 0 chr10 36745789 36746102 -103570663 + AluSx SINE Alu 1 313 0 1748 213 54 26 chr10 36746102 36746255 -103570510 + L1ME2 LINE L1 5791 5938 -226 813 148 0 16 chr10 36746259 36746387 -103570378 + FLAM_C SINE Alu 1 126 -17 1696 80 0 4 chr10 36746416 36746641 -103570124 + L1PA8 LINE L1 5948 6171 -1 23 68 0 0 chr10 36746641 36746685 -103570080 + AT_rich Low_complexity Low_complexity 1 44 0 656 262 19 12 chr10 36746685 36746933 -103569832 + L1MA10 LINE L1 5922 6327 -5 198 313 87 70 chr10 36746947 36747247 -103569518 + L2 LINE L2 2968 3272 0 1875 129 0 0 chr10 36747263 36747543 -103569222 + L1PA14 LINE L1 5882 6161 0 735 69 0 0 chr10 36747627 36747729 -103569036 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 226 266 25 0 chr10 36749151 36749230 -103567535 - MER69A DNA AcHobo -7 170 90 2039 137 16 7 chr10 36749231 36749715 -103567050 + AluSx SINE Alu 1 312 0 254 194 16 0 chr10 36749717 36749779 -103566986 + GA-rich Low_complexity Low_complexity 1 63 0 385 228 168 0 chr10 36749781 36749882 -103566883 - MER69A DNA AcHobo -59 118 1 782 240 70 25 chr10 36750427 36750652 -103566113 + MIR SINE MIR 10 248 -14 2506 39 0 30 chr10 36750652 36750957 -103565808 - AluY SINE Alu -15 296 1 782 240 70 25 chr10 36750957 36750973 -103565792 + MIR SINE MIR 248 262 0 1903 116 0 84 chr10 36751272 36751592 -103565173 + AluSx SINE Alu 1 293 -19 233 280 120 16 chr10 36751829 36751954 -103564811 + MIR SINE MIR 92 229 -33 500 130 0 0 chr10 36752758 36752827 -103563938 + AluS SINE Alu 6 74 -238 2320 89 3 13 chr10 36752848 36753162 -103563603 + AluY SINE Alu 1 311 0 2478 86 0 0 chr10 36754514 36754818 -103561947 - AluSx SINE Alu -8 304 1 685 273 36 5 chr10 36754851 36755045 -103561720 - MIR SINE MIR -62 200 1 254 56 0 0 chr10 36755697 36755733 -103561032 - L2 LINE L2 -4 3309 3274 4644 236 46 79 chr10 36757332 36759746 -103557019 + L1M3a LINE L1 251 2744 -3290 2400 80 0 3 chr10 36759746 36760046 -103556719 + AluY SINE Alu 1 299 -12 4644 236 46 79 chr10 36760046 36760981 -103555784 + L1M3a LINE L1 2744 3239 -2795 1142 166 80 140 chr10 36760981 36761330 -103555435 - MER7A DNA MER2_type -20 326 1 4644 236 46 79 chr10 36761330 36761989 -103554776 + L1M3a LINE L1 3239 3918 -2116 1142 226 55 43 chr10 36762202 36762529 -103554236 - LTR43 LTR ERV1 -140 462 132 279 162 44 15 chr10 36762638 36762706 -103554059 - LTR60 LTR ERV1 -516 70 1 890 149 0 19 chr10 36762706 36762860 -103553905 + L1M3a LINE L1 3957 4107 -1927 1052 164 11 11 chr10 36762860 36763043 -103553722 - LTR45B LTR ERV1 -272 217 35 261 57 0 0 chr10 36763097 36763132 -103553633 + (CA)n Simple_repeat Simple_repeat 2 36 0 562 280 69 34 chr10 36763132 36763510 -103553255 - L1ME4a LINE L1 -157 5964 5574 1681 170 72 0 chr10 36763570 36763847 -103552918 - AluJo SINE Alu -15 297 1 834 118 17 0 chr10 36764023 36764142 -103552623 - AluJb SINE Alu -191 121 1 185 271 0 34 chr10 36764147 36764206 -103552559 + L2 LINE L2 3186 3242 -30 201 74 0 0 chr10 36764208 36764235 -103552530 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 284 321 134 34 chr10 36764554 36765031 -103551734 + L2 LINE L2 390 914 -2400 264 59 0 0 chr10 36765175 36765209 -103551556 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 47 47 0 12 chr10 36766716 36766782 -103549983 + AT_rich Low_complexity Low_complexity 1 67 -18 2032 131 14 0 chr10 36766782 36766941 -103549824 - AluSx SINE Alu -25 287 121 234 0 0 0 chr10 36766941 36766967 -103549798 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2032 131 14 0 chr10 36766967 36767090 -103549675 - AluSx SINE Alu -191 121 1 47 47 0 12 chr10 36767090 36767109 -103549656 + AT_rich Low_complexity Low_complexity 67 85 0 1571 157 45 11 chr10 36767110 36767377 -103549388 - AluJo SINE Alu -22 290 15 197 180 80 0 chr10 36767601 36767651 -103549114 + MIR SINE MIR 88 141 -121 229 83 0 56 chr10 36768915 36768951 -103547814 + U2 snRNA snRNA 1 34 -154 2031 143 7 0 chr10 36769128 36769421 -103547344 + AluSx SINE Alu 1 295 -17 315 203 0 0 chr10 36770588 36770657 -103546108 + LTR58 LTR ERV1 361 429 -250 1511 75 58 40 chr10 36770694 36770920 -103545845 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36772609 36772633 -103544132 + AT_rich Low_complexity Low_complexity 1 24 0 214 292 31 0 chr10 36774796 36774861 -103541904 - L2 LINE L2 -1 3271 3205 396 88 0 0 chr10 36776641 36776698 -103540067 + (CA)n Simple_repeat Simple_repeat 2 58 0 585 293 46 0 chr10 36776830 36777050 -103539715 + MIR SINE MIR 12 239 -23 1880 168 0 16 chr10 36777121 36777430 -103539335 + AluJb SINE Alu 3 306 -6 1908 160 0 3 chr10 36777496 36777789 -103538976 - AluSx SINE Alu -20 292 1 857 177 165 37 chr10 36778601 36778844 -103537921 + L1MA7 LINE L1 6008 6281 -10 1829 155 7 0 chr10 36778849 36779152 -103537613 - AluY SINE Alu -4 307 3 186 193 0 0 chr10 36779313 36779370 -103537395 + A-rich Low_complexity Low_complexity 1 57 0 206 316 79 0 chr10 36780723 36780799 -103535966 + L2 LINE L2 3191 3272 -41 1178 160 27 0 chr10 36781178 36781366 -103535399 + AluSg/x SINE Alu 103 295 -17 315 203 0 0 chr10 36782533 36782602 -103534163 + LTR58 LTR ERV1 361 429 -250 1481 76 62 40 chr10 36782639 36782864 -103533901 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36784550 36784574 -103532191 + AT_rich Low_complexity Low_complexity 1 24 0 214 292 31 0 chr10 36786737 36786802 -103529963 - L2 LINE L2 -1 3271 3205 378 91 0 0 chr10 36788583 36788638 -103528127 + (CA)n Simple_repeat Simple_repeat 2 56 0 585 293 46 0 chr10 36788770 36788990 -103527775 + MIR SINE MIR 12 239 -23 1822 172 3 16 chr10 36789061 36789369 -103527396 + AluJb SINE Alu 3 306 -6 1879 158 3 3 chr10 36789435 36789727 -103527038 - AluSx SINE Alu -20 292 1 842 178 166 37 chr10 36790539 36790780 -103525985 + L1MA7 LINE L1 6008 6279 -12 2521 69 3 0 chr10 36790788 36791093 -103525672 - AluY SINE Alu -5 306 1 31 0 0 0 chr10 36791093 36791124 -103525641 + AT_rich Low_complexity Low_complexity 1 31 0 2078 129 3 0 chr10 36792711 36792998 -103523767 + AluSx SINE Alu 1 288 -24 237 216 259 11 chr10 36793032 36793166 -103523599 + MIR SINE MIR 5 174 -34 1864 151 11 3 chr10 36793441 36793726 -103523039 - AluJb SINE Alu -25 287 1 1770 144 70 30 chr10 36795085 36795384 -103521381 - AluJo SINE Alu 0 312 2 26 0 0 0 chr10 36795507 36795533 -103521232 + AT_rich Low_complexity Low_complexity 1 26 0 1537 163 0 8 chr10 36795925 36796165 -103520600 + AluJo SINE Alu 72 309 -3 21 0 0 0 chr10 36798482 36798503 -103518262 + AT_rich Low_complexity Low_complexity 1 21 0 1546 141 55 52 chr10 36798509 36798799 -103517966 - AluJo SINE Alu -4 308 18 2314 87 7 3 chr10 36800144 36800442 -103516323 - AluSg SINE Alu -11 299 1 259 284 134 0 chr10 36802545 36802672 -103514093 + L2 LINE L2 3165 3308 -5 2215 172 23 47 chr10 36803270 36803713 -103513052 + Tigger2a DNA MER2_type 1 432 -2 191 229 0 0 chr10 36803861 36803896 -103512869 - L3b LINE CR1 -15 1568 1534 831 254 0 0 chr10 36803905 36804094 -103512671 - MER5A DNA MER1_type 0 189 1 2084 147 0 0 chr10 36804224 36804530 -103512235 - AluSx SINE Alu -6 306 1 1328 148 163 44 chr10 36804786 36805056 -103511709 - AluJo SINE Alu 0 302 1 1781 176 3 10 chr10 36805866 36806161 -103510604 + AluJo SINE Alu 1 293 -19 337 330 34 62 chr10 36807329 36807398 -103509367 - MIR SINE MIR -56 206 137 192 97 0 0 chr10 36807398 36807429 -103509336 + (CCCA)n Simple_repeat Simple_repeat 3 33 0 337 330 34 62 chr10 36807429 36807568 -103509197 - MIR SINE MIR -125 137 4 3858 163 117 21 chr10 36807747 36808501 -103508264 + LTR1B LTR ERV1 1 826 0 348 290 58 58 chr10 36810818 36810993 -103505772 - MER5A DNA MER1_type 0 178 10 325 252 203 0 chr10 36811020 36811143 -103505622 - Charlie8 DNA MER1_type -2228 189 42 1121 242 71 24 chr10 36812082 36812183 -103504582 + MLT1E LTR MaLR 1 96 -497 557 110 10 40 chr10 36812183 36812283 -103504482 - L1PA11 LINE L1 -3 6171 6075 1121 242 71 24 chr10 36812283 36812662 -103504103 + MLT1E LTR MaLR 96 592 -1 225 217 0 0 chr10 36812679 36812725 -103504040 + MLT1I LTR MaLR 98 143 -266 1792 159 33 0 chr10 36817350 36817652 -103499113 + AluJo SINE Alu 1 312 0 455 122 11 0 chr10 36817687 36817777 -103498988 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 22 56 0 0 chr10 36820274 36820310 -103496455 + GC_rich Low_complexity Low_complexity 1 36 0 1849 286 123 49 chr10 36820530 36820619 -103496146 + L2 LINE L2 1570 1651 -1662 1609 177 44 0 chr10 36820619 36820913 -103495852 - AluJo SINE Alu -4 308 2 1849 286 123 49 chr10 36820913 36822267 -103494498 + L2 LINE L2 1651 3115 -198 263 297 137 22 chr10 36822461 36822643 -103494122 + LTR16C LTR ERVL 82 284 -207 489 234 102 15 chr10 36822775 36822972 -103493793 + LTR16C LTR ERVL 278 491 0 2478 54 0 10 chr10 36823003 36823299 -103493466 + AluY SINE Alu 1 293 -18 298 117 0 52 chr10 36823637 36823714 -103493051 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 2052 108 38 11 chr10 36824070 36824376 -103492389 + AluSc SINE Alu 1 309 0 536 230 59 32 chr10 36825608 36825795 -103490970 - HAL1 LINE L1 -146 2361 2170 2032 282 68 40 chr10 36825967 36826218 -103490547 - HAL1 LINE L1 -790 1717 1475 315 0 0 0 chr10 36826218 36826253 -103490512 + (TA)n Simple_repeat Simple_repeat 1 35 0 2032 282 68 40 chr10 36826253 36827070 -103489695 - HAL1 LINE L1 -1032 1475 619 31 76 0 0 chr10 36828701 36828767 -103487998 + AT_rich Low_complexity Low_complexity 1 66 0 327 237 125 7 chr10 36829988 36830140 -103486625 - MER104 DNA Tc2 -10 170 1 456 294 43 18 chr10 36831274 36831437 -103485328 - L2 LINE L2 -994 2320 2154 22 0 0 0 chr10 36832442 36832464 -103484301 + AT_rich Low_complexity Low_complexity 1 22 0 1838 184 20 3 chr10 36833261 36833603 -103483162 - MER7A DNA MER2_type 0 346 1 435 301 46 31 chr10 36833882 36834078 -103482687 - MIR3 SINE MIR 0 208 10 626 169 0 85 chr10 36834134 36834264 -103482501 - AluJo/FRAM SINE Alu -21 291 173 395 208 0 0 chr10 36834265 36834337 -103482428 - AluJ/FLAM SINE Alu -230 72 1 299 303 83 28 chr10 36835928 36836037 -103480728 - L2 LINE L2 -19 3253 3139 458 301 56 44 chr10 36836292 36836611 -103480154 + HAL1 LINE L1 5 327 -2180 351 0 0 0 chr10 36836695 36836734 -103480031 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr10 36836737 36836763 -103480002 + AT_rich Low_complexity Low_complexity 1 26 0 1686 164 47 0 chr10 36837148 36837423 -103479342 - AluJo SINE Alu -24 288 1 299 307 65 84 chr10 36838272 36838487 -103478278 + L2 LINE L2 3061 3271 -1 298 282 72 20 chr10 36838928 36839123 -103477642 + MER112 DNA MER1_type 8 212 -48 713 190 7 7 chr10 36839135 36839272 -103477493 + FLAM_C SINE Alu 7 143 0 830 217 25 0 chr10 36839697 36839895 -103476870 + MER3 DNA MER1_type 2 204 -5 191 345 17 0 chr10 36840231 36840289 -103476476 + MIR SINE MIR 45 103 -105 575 247 135 18 chr10 36840729 36840899 -103475866 - MIR SINE MIR -16 246 57 1868 148 50 13 chr10 36842006 36842304 -103474461 + AluJo SINE Alu 1 309 -3 369 211 56 56 chr10 36842544 36842785 -103473980 + MER41E LTR ERV1 55 430 -205 247 206 0 16 chr10 36843079 36843142 -103473623 + LTR28 LTR ERV1 1 62 -958 * 1734 167 23 27 chr10 36843109 36843524 -103473241 + MER61D LTR ERV1 14 501 0 192 362 58 0 chr10 36843580 36843649 -103473116 - L2 LINE L2 -39 3233 3161 609 217 47 0 chr10 36844608 36844737 -103472028 - MER58B DNA MER1_type -9 332 198 328 308 121 27 chr10 36846139 36846363 -103470402 - L3b LINE CR1 -237 1346 1102 1578 165 7 62 chr10 36847365 36847674 -103469091 + AluJo SINE Alu 1 292 -20 451 326 70 27 chr10 36850547 36850734 -103466031 + L3b LINE CR1 1284 1478 -105 195 295 11 53 chr10 36850743 36850838 -103465927 - L2 LINE L2 -640 2674 2584 1903 147 7 0 chr10 36851123 36851409 -103465356 - AluJo SINE Alu -24 288 1 237 303 327 0 chr10 36851433 36851598 -103465167 - L2 LINE L2 0 3272 3054 2347 107 0 7 chr10 36852690 36853000 -103463765 + AluSx SINE Alu 1 308 -4 265 171 289 0 chr10 36853560 36853636 -103463129 - MER5A DNA MER1_type -83 106 9 312 51 51 0 chr10 36853732 36853791 -103462974 + A-rich Low_complexity Low_complexity 6 67 0 24 32 0 0 chr10 36857247 36857278 -103459487 + AT_rich Low_complexity Low_complexity 1 31 0 336 154 29 0 chr10 36857966 36858070 -103458695 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 0 0 0 chr10 36858203 36858234 -103458531 + AT_rich Low_complexity Low_complexity 1 31 0 186 261 75 90 chr10 36859823 36859957 -103456808 - MIR3 SINE MIR -13 195 64 195 42 0 0 chr10 36860181 36860205 -103456560 + (CA)n Simple_repeat Simple_repeat 1 24 0 1054 68 0 85 chr10 36860932 36861054 -103455711 - L1MA1 LINE L1 0 6302 6198 2282 78 3 0 chr10 36861054 36861347 -103455418 - AluSg SINE Alu -14 296 3 1054 68 0 85 chr10 36861347 36861401 -103455364 - L1MA1 LINE L1 -104 6198 6141 277 359 120 0 chr10 36861820 36861962 -103454803 - L2 LINE L2 -270 3043 2885 327 219 135 0 chr10 36862007 36862103 -103454662 + MIR SINE MIR 76 184 -78 180 0 0 0 chr10 36863746 36863766 -103452999 + (A)n Simple_repeat Simple_repeat 1 20 0 648 120 0 10 chr10 36864245 36864345 -103452420 - AluJ SINE Alu -25 287 189 1141 205 62 28 chr10 36864350 36864926 -103451839 + LTR9B LTR ERV1 7 644 0 1257 165 0 5 chr10 36864926 36865120 -103451645 - AluJ SINE Alu -119 193 1 459 0 0 0 chr10 36866816 36866867 -103449898 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 318 335 66 30 chr10 36866919 36867116 -103449649 - MIR SINE MIR -50 212 9 978 148 19 6 chr10 36867223 36867385 -103449380 + FRAM SINE Alu 1 164 -2 210 259 24 59 chr10 36867844 36867929 -103448836 + L2 LINE L2 3142 3223 -49 3660 207 92 36 chr10 36869958 36870059 -103446706 + Charlie1 DNA MER1_type 5 99 -2662 1364 179 50 44 chr10 36870059 36870356 -103446409 + AluJo SINE Alu 1 299 -13 3660 207 92 36 chr10 36870356 36871603 -103445162 + Charlie1 DNA MER1_type 99 2761 0 260 309 131 82 chr10 36871636 36872209 -103444556 - L2 LINE L2 -88 3184 2566 198 103 0 0 chr10 36872649 36872678 -103444087 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 1708 122 38 94 chr10 36873087 36873406 -103443359 - AluJb SINE Alu -11 301 1 21 36 0 0 chr10 36875621 36875649 -103441116 + AT_rich Low_complexity Low_complexity 1 28 0 466 272 30 69 chr10 36876832 36877034 -103439731 + MIR SINE MIR 68 261 -1 2280 65 0 0 chr10 36877570 36877846 -103438919 - AluY SINE Alu -2 309 34 2113 85 31 27 chr10 36878739 36879033 -103437732 - AluSc SINE Alu -14 295 1 423 38 0 0 chr10 36879460 36879513 -103437252 + (TG)n Simple_repeat Simple_repeat 1 53 0 2660 166 20 11 chr10 36879899 36880384 -103436381 + LTR45B LTR ERV1 3 525 0 330 313 41 6 chr10 36881139 36881312 -103435453 - MIR SINE MIR -49 213 34 291 279 192 34 chr10 36882086 36882294 -103434471 + MIR SINE MIR 20 260 -2 250 254 42 0 chr10 36882730 36882801 -103433964 - L1MD2 LINE L1 -237 6122 6049 186 346 99 0 chr10 36882830 36882911 -103433854 - L2 LINE L2 -14 3258 3170 621 111 11 11 chr10 36882991 36883081 -103433684 - HY4 scRNA scRNA -3 90 1 1865 163 3 0 chr10 36883083 36883371 -103433394 - AluJo SINE Alu -15 297 9 2250 150 9 17 chr10 36884422 36884769 -103431996 + MER2 DNA MER2_type 1 344 0 2144 136 14 163 chr10 36885202 36885704 -103431061 - LTR32 LTR ERVL -4 467 41 2375 179 30 5 chr10 36887455 36887896 -103428869 - MER66A LTR ERV1 0 478 27 438 307 92 26 chr10 36890593 36890821 -103425944 + MIR SINE MIR 20 262 0 2289 107 7 0 chr10 36892506 36892816 -103423949 + AluSx SINE Alu 1 312 0 1828 172 52 77 chr10 36894051 36894493 -103422272 - MSTB1 LTR MaLR 0 432 2 1816 156 6 35 chr10 36894890 36895204 -103421561 - AluJo SINE Alu -7 305 1 723 198 8 0 chr10 36895552 36895673 -103421092 + FLAM_C SINE Alu 12 133 -10 487 331 102 8 chr10 36898738 36899004 -103417761 - L2 LINE L2 -4 3309 3019 185 132 0 151 chr10 36899283 36899336 -103417429 + L2 LINE L2 3228 3272 0 210 277 36 24 chr10 36901640 36901723 -103415042 + MIR SINE MIR 103 186 -76 2584 199 128 43 chr10 36902072 36902400 -103414365 + MER45B DNA AcHobo 1 300 -740 1065 92 61 0 chr10 36902400 36902563 -103414202 - L1MA8 LINE L1 0 6291 6119 2584 199 128 43 chr10 36902563 36902962 -103413803 + MER45B DNA AcHobo 300 797 -243 450 100 0 0 chr10 36902965 36903025 -103413740 + L1MB2 LINE L1 6072 6131 -40 1333 163 16 12 chr10 36903025 36903282 -103413483 + MER45B DNA AcHobo 773 1030 -10 234 294 114 57 chr10 36904226 36904454 -103412311 + L1MC4 LINE L1 7526 7766 -276 536 300 70 16 chr10 36904718 36904961 -103411804 - MIR SINE MIR 0 262 7 192 213 0 85 chr10 36906135 36906182 -103410583 - L2 LINE L2 -109 3163 3121 2409 104 0 0 chr10 36906344 36906651 -103410114 - AluSq SINE Alu -6 307 1 2392 201 50 72 chr10 36906680 36907273 -103409492 + L1MB7 LINE L1 4930 5535 -649 2068 138 0 0 chr10 36907273 36907563 -103409202 + AluSx SINE Alu 1 290 -22 2392 201 50 72 chr10 36907563 36907957 -103408808 + L1MB7 LINE L1 5535 5936 -248 5474 109 35 71 chr10 36907957 36908359 -103408406 + L1PA15 LINE L1 5070 5485 -680 2252 98 0 7 chr10 36908359 36908656 -103408109 + AluSp SINE Alu 1 295 -18 5474 109 35 71 chr10 36908656 36908861 -103407904 + L1PA15 LINE L1 5485 5696 -469 551 62 0 12 chr10 36908861 36908942 -103407823 + (TA)n Simple_repeat Simple_repeat 1 80 0 5474 109 35 71 chr10 36908942 36909453 -103407312 + L1PA15 LINE L1 5696 6162 -3 2392 201 50 72 chr10 36909453 36909541 -103407224 + L1MB7 LINE L1 5936 5961 -223 697 193 14 0 chr10 36909568 36909708 -103407057 + L1MB7 LINE L1 6035 6176 -8 1485 158 0 97 chr10 36910262 36910572 -103406193 - AluJo SINE Alu -21 291 12 231 36 0 0 chr10 36910692 36910720 -103406045 + (TG)n Simple_repeat Simple_repeat 2 29 0 1681 166 10 14 chr10 36911783 36912072 -103404693 + AluJo SINE Alu 6 293 -19 222 37 0 0 chr10 36912300 36912327 -103404438 + (A)n Simple_repeat Simple_repeat 1 27 0 1821 179 0 3 chr10 36913736 36914037 -103402728 - AluJo SINE Alu -12 300 1 180 0 0 0 chr10 36914053 36914073 -103402692 + (T)n Simple_repeat Simple_repeat 1 20 0 1087 286 159 21 chr10 36914209 36914864 -103401901 + L2 LINE L2 1903 2647 -667 256 218 13 51 chr10 36914876 36914954 -103401811 + LTR50 LTR ERVL 1 75 -720 * 379 256 101 0 chr10 36914944 36915073 -103401692 + LTR33A LTR ERVL 354 495 -28 429 343 82 6 chr10 36915318 36915652 -103401113 + L2 LINE L2 2684 3042 -230 23 33 0 0 chr10 36915694 36915724 -103401041 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 36915817 36915844 -103400921 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr10 36916120 36916141 -103400624 + AT_rich Low_complexity Low_complexity 1 21 0 214 217 0 43 chr10 36917079 36917125 -103399640 - MIR3 SINE MIR -21 187 144 2034 151 0 3 chr10 36920553 36920852 -103395913 + AluSx SINE Alu 1 298 -14 296 272 96 29 chr10 36921039 36921175 -103395590 - MIR SINE MIR -6 256 112 312 260 100 64 chr10 36921175 36921425 -103395340 + L1ME4a LINE L1 5765 6023 -98 560 303 65 47 chr10 36921963 36922471 -103394294 - L2 LINE L2 -3 3310 2800 184 246 154 0 chr10 36923522 36923587 -103393178 + MIR3 SINE MIR 134 208 0 1926 133 0 4 chr10 36923710 36923974 -103392791 + AluSx SINE Alu 26 288 -24 1807 105 101 0 chr10 36924589 36924846 -103391919 + AluSg SINE Alu 1 283 -27 243 255 32 43 chr10 36924917 36925011 -103391754 - MIR SINE MIR -37 225 133 414 0 0 0 chr10 36926612 36926658 -103390107 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 641 288 82 25 chr10 36927282 36927650 -103389115 + L1MEc LINE L1 31 419 -5977 845 189 77 0 chr10 36927964 36928133 -103388632 + AluJo SINE Alu 118 299 -13 624 228 31 81 chr10 36928142 36928265 -103388500 + L1MEc LINE L1 768 873 -5523 2126 117 20 0 chr10 36928265 36928564 -103388201 + AluSx SINE Alu 6 310 -2 624 228 31 81 chr10 36928564 36928699 -103388066 + L1MEc LINE L1 873 1013 -5383 404 189 72 1 chr10 36929575 36929671 -103387094 - MIR SINE MIR -70 138 37 295 159 0 72 chr10 36930211 36930280 -103386485 - AluJo SINE Alu -167 135 72 783 163 0 0 chr10 36930228 36930351 -103386414 - AluJo/FLAM SINE Alu -179 123 1 795 191 191 19 chr10 36932409 36932618 -103384147 - MIR SINE MIR 0 262 18 348 253 53 106 chr10 36932921 36933186 -103383579 - L2 LINE L2 -1 3312 3062 327 212 0 0 chr10 36933732 36933817 -103382948 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 821 260 13 8 chr10 36934872 36935131 -103381634 + L1PB4 LINE L1 5896 6156 0 2252 103 3 0 chr10 36935138 36935440 -103381325 + AluSg SINE Alu 1 303 -7 324 0 0 0 chr10 36935558 36935594 -103381171 + (TG)n Simple_repeat Simple_repeat 2 37 0 363 315 68 12 chr10 36936174 36936336 -103380429 - MER91B DNA MER1_type -4 186 16 203 358 152 32 chr10 36939119 36939793 -103376972 - L2 LINE L2 -493 2821 2046 1656 161 17 53 chr10 36939793 36940092 -103376673 + AluJo SINE Alu 5 292 -20 203 358 152 32 chr10 36940092 36940169 -103376596 - L2 LINE L2 -1268 2046 1980 1841 182 123 18 chr10 36940241 36940681 -103376084 - MLT1D LTR MaLR -19 486 1 251 161 18 36 chr10 36940820 36940876 -103375889 - Alu SINE Alu -1 301 247 1613 178 14 11 chr10 36940876 36941151 -103375614 - AluJo SINE Alu -34 278 3 893 169 0 0 chr10 36941152 36941288 -103375477 - AluJo SINE Alu -176 136 1 225 281 112 31 chr10 36941288 36941548 -103375217 - L2 LINE L2 -1603 1711 1431 2164 113 0 0 chr10 36942420 36942850 -103373915 + AluSx SINE Alu 1 430 0 319 256 175 22 chr10 36943080 36943217 -103373548 + MER5A DNA MER1_type 32 189 0 1754 184 7 13 chr10 36943240 36943550 -103373215 - AluJo SINE Alu -4 308 1 709 262 56 26 chr10 36944197 36944363 -103372402 - MIR SINE MIR -21 241 65 1788 157 28 7 chr10 36944363 36944650 -103372115 + AluJb SINE Alu 5 297 -15 709 262 56 26 chr10 36944650 36944716 -103372049 - MIR SINE MIR -197 65 2 2081 153 14 14 chr10 36945018 36945384 -103371381 + MER47A DNA MER2_type 1 366 0 258 180 0 0 chr10 36945642 36945692 -103371073 - MLT1J2 LTR MaLR -329 121 72 2025 129 7 17 chr10 36945732 36946034 -103370731 - AluJo SINE Alu -13 299 1 195 309 18 0 chr10 36947502 36947557 -103369208 - L3 LINE CR1 -20 1557 1502 843 200 22 22 chr10 36948737 36948922 -103367843 + MER5A DNA MER1_type 5 189 0 6334 29 0 0 chr10 36949185 36949921 -103366844 + L1PA5 LINE L1 5416 6151 -3 634 123 17 13 chr10 36949938 36950078 -103366687 + L1MA4A LINE L1 6160 6299 -4 200 158 0 123 chr10 36950225 36950282 -103366483 + L2 LINE L2 2688 2737 -577 2145 124 0 0 chr10 36951124 36951422 -103365343 - AluSq SINE Alu -15 298 1 2478 228 23 27 chr10 36952182 36952920 -103363845 + L1MD1 LINE L1 3657 4391 -1755 2886 243 37 48 chr10 36953020 36953438 -103363327 + L1MD1 LINE L1 4870 5291 -951 1569 188 15 0 chr10 36953438 36953699 -103363066 + AluJb SINE Alu 14 278 -34 303 49 0 0 chr10 36953702 36953743 -103363022 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 2886 243 37 48 chr10 36953743 36954717 -103362048 + L1MD1 LINE L1 5293 6240 -2 1401 152 25 33 chr10 36959040 36959283 -103357482 - AluJo SINE Alu -30 282 42 2478 96 19 16 chr10 36959408 36959782 -103356983 + THE1C LTR MaLR 1 375 0 828 198 0 50 chr10 36960111 36960293 -103356472 - FRAM SINE Alu 0 176 4 230 329 29 7 chr10 36961786 36961926 -103354839 - MER103 DNA DNA -12 154 12 21 36 0 0 chr10 36964740 36964768 -103351997 + AT_rich Low_complexity Low_complexity 1 28 0 1827 140 9 59 chr10 36966254 36966576 -103350189 + AluJo SINE Alu 1 306 -6 1181 268 137 36 chr10 36967196 36968029 -103348736 - L2 LINE L2 0 3313 2371 1930 168 0 0 chr10 36968905 36969197 -103347568 + AluJb SINE Alu 1 292 -20 1057 148 32 56 chr10 36969946 36970162 -103346603 - AluJb SINE Alu -20 292 82 1987 131 0 0 chr10 36970184 36970466 -103346299 - AluSx SINE Alu -30 282 1 216 0 0 0 chr10 36970472 36970496 -103346269 + (TAA)n Simple_repeat Simple_repeat 1 24 0 365 280 84 35 chr10 36972483 36972626 -103344139 - MIR SINE MIR -66 196 47 684 165 0 9 chr10 36972743 36972858 -103343907 + FLAM_C SINE Alu 3 116 -17 27 0 0 0 chr10 36973686 36973713 -103343052 + AT_rich Low_complexity Low_complexity 1 27 0 726 172 15 0 chr10 36975897 36976031 -103340734 + AluJo SINE Alu 1 136 -176 1931 128 11 0 chr10 36977226 36977491 -103339274 - AluJo SINE Alu -30 282 15 24 32 0 0 chr10 36977508 36977539 -103339226 + AT_rich Low_complexity Low_complexity 1 31 0 332 222 192 0 chr10 36977816 36977915 -103338850 + FLAM_A SINE Alu 5 122 -11 1625 171 67 0 chr10 36978017 36978286 -103338479 + AluJo SINE Alu 3 289 -23 322 260 24 55 chr10 36978761 36978888 -103337877 + MLT1J LTR MaLR 4 126 -385 763 200 119 60 chr10 36978911 36979146 -103337619 + MIR SINE MIR 11 259 -3 1924 197 78 6 chr10 36979274 36979746 -103337019 + L1MB3 LINE L1 5676 6181 -2 313 304 80 0 chr10 36979764 36979902 -103336863 + MLT1J LTR MaLR 318 466 -45 1181 172 216 36 chr10 36981348 36981468 -103335297 + AluJb SINE Alu 1 98 -204 195 42 0 0 chr10 36981468 36981492 -103335273 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1181 172 216 36 chr10 36981492 36981621 -103335144 + AluJb SINE Alu 98 295 -7 403 302 128 76 chr10 36982284 36982996 -103333769 + L2 LINE L2 1952 2700 -614 927 289 8 4 chr10 36983295 36983534 -103333231 - MIR SINE MIR -21 241 2 378 299 19 38 chr10 36983540 36983697 -103333068 - MER112 DNA MER1_type -106 154 1 392 243 0 39 chr10 36983883 36983986 -103332779 + L2 LINE L2 3173 3271 -1 818 164 0 15 chr10 36985186 36985320 -103331445 + FLAM_C SINE Alu 2 133 0 561 294 71 34 chr10 36985561 36985799 -103330966 + MIR SINE MIR 4 250 -12 1483 163 52 45 chr10 36986668 36986956 -103329809 + AluJo SINE Alu 1 290 -22 1733 140 54 0 chr10 36986983 36987262 -103329503 + AluSx SINE Alu 1 294 -18 409 135 0 27 chr10 36988932 36989006 -103327759 - FLAM_C SINE Alu -3 140 69 1683 150 78 14 chr10 37040995 37041288 -103275477 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37041290 37041320 -103275445 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37042046 37042221 -103274544 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37042419 37042709 -103274056 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37042730 37042848 -103273917 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37042958 37043256 -103273509 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37043258 37043447 -103273318 - AluSq SINE Alu -124 189 1 1717 202 0 3 chr10 37043450 37043747 -103273018 - AluJb SINE Alu -16 296 1 2056 138 0 0 chr10 37044165 37044456 -103272309 - AluSx SINE Alu -21 291 1 2822 22 0 0 chr10 37044838 37045152 -103271613 + AluYb8 SINE Alu 4 317 -1 1909 147 40 0 chr10 37045346 37045646 -103271119 + AluSx SINE Alu 1 312 0 287 319 92 14 chr10 37046278 37046419 -103270346 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37048734 37048768 -103267997 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 627 191 0 0 chr10 37049428 37049533 -103267232 - FLAM_A SINE Alu -16 126 22 189 250 0 0 chr10 37052333 37052373 -103264392 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37053663 37053781 -103262984 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37053916 37054081 -103262684 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37054081 37054344 -103262421 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37054347 37054396 -103262369 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37054396 37054503 -103262262 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37054683 37054711 -103262054 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37054904 37055244 -103261521 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37055533 37055809 -103260956 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37055839 37055970 -103260795 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37056037 37056382 -103260383 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37056964 37057134 -103259631 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37057394 37057427 -103259338 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37057548 37057592 -103259173 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37058154 37058210 -103258555 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37059261 37059416 -103257349 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37059657 37059682 -103257083 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37059989 37060449 -103256316 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37060601 37061049 -103255716 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37061049 37061101 -103255664 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37061101 37061145 -103255620 + MLT2B1 LTR ERVL 480 520 0 291 71 0 0 chr10 37061236 37061278 -103255487 + (TG)n Simple_repeat Simple_repeat 2 43 0 1669 189 4 0 chr10 37061295 37061576 -103255189 - AluJo SINE Alu -30 282 1 333 0 0 0 chr10 37062459 37062496 -103254269 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37063303 37063500 -103253265 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37063500 37063547 -103253218 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37063849 37063977 -103252788 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37063993 37064115 -103252650 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37064119 37064157 -103252608 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37064515 37064625 -103252140 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37066148 37066323 -103250442 + LTR8 LTR ERV1 1 180 -511 1052 196 112 52 chr10 37066328 37066614 -103250151 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37067225 37067253 -103249512 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37067467 37067501 -103249264 + AT_rich Low_complexity Low_complexity 1 34 0 1697 177 7 0 chr10 37067504 37067786 -103248979 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37068095 37068389 -103248376 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37068549 37068852 -103247913 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37069255 37069280 -103247485 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 214 0 35 chr10 37069280 37069481 -103247284 - AluJo SINE Alu -32 280 87 256 336 45 15 chr10 37069489 37069623 -103247142 - L1MC/D LINE L1 -1991 5817 5680 1557 194 20 7 chr10 37070207 37070500 -103246265 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37070602 37070723 -103246042 + AT_rich Low_complexity Low_complexity 1 121 0 764 310 45 50 chr10 37070972 37071369 -103245396 - L2 LINE L2 0 3313 2919 355 312 101 30 chr10 37071458 37071657 -103245108 + MIR SINE MIR 2 214 -48 5262 143 23 48 chr10 37071682 37072907 -103243858 + L1MA8 LINE L1 5089 6285 -6 2003 113 7 11 chr10 37073821 37074128 -103242637 - AluSx SINE Alu 0 306 1 1604 142 77 4 chr10 37074730 37074991 -103241774 - AluJo SINE Alu -13 299 20 5323 133 53 46 chr10 37076106 37077170 -103239595 + MER11C LTR ERVK 1 1071 0 716 221 0 0 chr10 37077683 37077810 -103238955 + FLAM_A SINE Alu 1 127 -6 1618 199 0 22 chr10 37078703 37078867 -103237898 - AluJo SINE Alu -7 305 139 384 40 0 0 chr10 37078867 37078917 -103237848 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2031 125 0 4 chr10 37078918 37079198 -103237567 - AluSg SINE Alu -31 279 1 1618 199 0 22 chr10 37079198 37079343 -103237422 - AluJo SINE Alu -172 140 1 248 312 72 8 chr10 37079869 37079994 -103236771 - MIR SINE MIR -64 198 66 2270 107 7 3 chr10 37080772 37081081 -103235684 + AluSq SINE Alu 1 310 -3 2481 66 23 0 chr10 37081082 37081385 -103235380 + AluY SINE Alu 2 311 0 375 23 0 0 chr10 37081646 37081690 -103235075 + (CA)n Simple_repeat Simple_repeat 1 44 0 231 310 58 0 chr10 37083630 37083717 -103233048 - MIR SINE MIR -11 251 160 203 327 20 52 chr10 37083920 37084073 -103232692 - L2 LINE L2 -656 2658 2511 22 0 0 0 chr10 37084274 37084296 -103232469 + AT_rich Low_complexity Low_complexity 1 22 0 492 285 141 47 chr10 37085765 37086382 -103230383 + L1MC4a LINE L1 5499 6173 -1635 196 222 0 0 chr10 37088526 37088562 -103228203 - L2 LINE L2 -1897 1417 1382 1936 129 11 7 chr10 37088766 37089046 -103227719 - AluSx SINE Alu -7 305 25 22 0 0 0 chr10 37091098 37091120 -103225645 + AT_rich Low_complexity Low_complexity 1 22 0 1569 185 16 38 chr10 37091903 37092217 -103224548 + AluJo SINE Alu 4 310 -2 2193 113 16 38 chr10 37092695 37093067 -103223698 - THE1B LTR MaLR 0 364 1 518 302 94 5 chr10 37095671 37095873 -103220892 - MIR SINE MIR -18 244 25 21 0 0 0 chr10 37095996 37096017 -103220748 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 37096277 37096302 -103220463 + AT_rich Low_complexity Low_complexity 1 25 0 3794 168 15 72 chr10 37096408 37096513 -103220252 + L1MA9 LINE L1 5384 5493 -819 2089 145 6 3 chr10 37096513 37096824 -103219941 + AluSx SINE Alu 1 312 0 2117 125 0 16 chr10 37096834 37097139 -103219626 + AluSc SINE Alu 1 300 -9 3794 168 15 72 chr10 37097139 37097445 -103219320 + L1MA9 LINE L1 5502 5824 -488 276 30 0 0 chr10 37097445 37097478 -103219287 + (TG)n Simple_repeat Simple_repeat 2 34 0 3794 168 15 72 chr10 37097478 37097831 -103218934 + L1MA9 LINE L1 5824 6196 -116 1576 180 10 37 chr10 37097831 37098122 -103218643 + AluJo SINE Alu 1 285 -27 180 0 0 0 chr10 37098122 37098142 -103218623 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3794 168 15 72 chr10 37098150 37098232 -103218533 + L1MA9 LINE L1 6196 6184 -128 2463 61 3 0 chr10 37098232 37098529 -103218236 - AluY SINE Alu -12 299 2 3794 168 15 72 chr10 37098529 37098653 -103218112 + L1MA9 LINE L1 6183 6312 0 1228 48 0 24 chr10 37098765 37098932 -103217833 + L1PA4 LINE L1 5993 6155 0 456 249 40 49 chr10 37101491 37101800 -103214965 + L1MC4 LINE L1 6977 7217 -744 225 337 30 30 chr10 37102247 37102413 -103214352 + L2 LINE L2 2565 2730 -584 219 286 54 0 chr10 37102548 37102604 -103214161 + L2 LINE L2 3002 3060 -212 259 50 50 0 chr10 37104816 37104856 -103211909 - Alu SINE Alu -12 289 248 2318 94 0 3 chr10 37105612 37105911 -103210854 - AluSq SINE Alu -15 298 1 1705 201 7 0 chr10 37106914 37107212 -103209553 - AluJb SINE Alu -12 300 1 1966 160 0 16 chr10 37107503 37107816 -103208949 - AluJo SINE Alu -4 308 1 449 245 0 9 chr10 37107836 37107942 -103208823 + FRAM SINE Alu 56 160 -16 2358 66 0 16 chr10 37108479 37108784 -103207981 - AluY SINE Alu -11 300 1 24 32 0 0 chr10 37108994 37109025 -103207740 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 37109047 37109076 -103207689 + AT_rich Low_complexity Low_complexity 1 29 0 341 275 24 97 chr10 37109784 37109865 -103206900 + MIR SINE MIR 71 156 -106 2477 68 3 0 chr10 37109865 37110175 -103206590 + AluY SINE Alu 1 311 0 341 275 24 97 chr10 37110175 37110300 -103206465 + MIR SINE MIR 156 262 0 21 0 0 0 chr10 37110594 37110615 -103206150 + AT_rich Low_complexity Low_complexity 1 21 0 2294 100 0 3 chr10 37110636 37110945 -103205820 + AluSx SINE Alu 1 308 -4 1427 183 52 17 chr10 37111879 37112169 -103204596 + AluJb SINE Alu 4 303 -9 210 222 44 0 chr10 37112171 37112216 -103204549 + polypurine Low_complexity Low_complexity 4 50 0 544 197 14 50 chr10 37112217 37112536 -103204229 + GA-rich Low_complexity Low_complexity 1 307 0 356 187 8 66 chr10 37112636 37112896 -103203869 + GA-rich Low_complexity Low_complexity 1 244 0 1823 156 47 26 chr10 37113198 37113538 -103203227 + MER7A DNA MER2_type 1 345 -1 211 171 110 98 chr10 37113683 37113765 -103203000 + MER5A DNA MER1_type 103 185 -4 369 225 17 81 chr10 37113941 37114114 -103202651 + L1ME LINE L1 5588 5749 -372 1710 184 9 26 chr10 37114387 37114734 -103202031 + MER2 DNA MER2_type 1 341 -3 341 302 102 36 chr10 37116592 37116817 -103199948 + L1ME4a LINE L1 5683 5922 -199 351 0 0 0 chr10 37116817 37116856 -103199909 + (TG)n Simple_repeat Simple_repeat 2 40 0 1575 197 11 0 chr10 37116960 37117265 -103199500 + AluJb SINE Alu 1 308 0 180 194 0 0 chr10 37118468 37118504 -103198261 - L2 LINE L2 0 3313 3278 1915 153 7 0 chr10 37118608 37118902 -103197863 - AluSx SINE Alu -16 296 1 575 321 72 9 chr10 37119944 37120165 -103196600 + MIR SINE MIR 14 248 -14 996 132 26 5 chr10 37120314 37120504 -103196261 + L1MA4 LINE L1 6096 6289 -11 2023 118 0 14 chr10 37121064 37121352 -103195413 - AluSx SINE Alu -28 284 1 29 0 0 0 chr10 37122708 37122737 -103194028 + AT_rich Low_complexity Low_complexity 1 29 0 863 173 0 0 chr10 37122898 37123031 -103193734 + AluJ SINE Alu 1 133 -169 853 180 0 56 chr10 37123031 37123073 -103193692 + AluJ SINE Alu 129 172 -140 2314 188 41 2 chr10 37123073 37123537 -103193228 + MER66B LTR ERV1 5 486 0 853 180 0 56 chr10 37123537 37123655 -103193110 + AluJ SINE Alu 172 280 -32 222 222 0 0 chr10 37124116 37124161 -103192604 - MIR SINE MIR -63 145 101 4189 209 102 30 chr10 37124538 37125499 -103191266 - Charlie1a DNA MER1_type -1306 1455 365 637 224 0 8 chr10 37125499 37125633 -103191132 + FLAM_A SINE Alu 1 133 0 4189 209 102 30 chr10 37125633 37126027 -103190738 - Charlie1a DNA MER1_type -2396 365 1 202 303 45 0 chr10 37126036 37126125 -103190640 + MIR3 SINE MIR 85 177 -31 2193 87 4 0 chr10 37128044 37128319 -103188446 - AluSp SINE Alu -21 292 17 273 224 172 30 chr10 37128514 37128648 -103188117 + L1MD1 LINE L1 6069 6221 -21 2411 65 0 20 chr10 37128653 37128959 -103187806 - AluY SINE Alu -11 300 1 1549 194 7 13 chr10 37129732 37130031 -103186734 - AluJb SINE Alu -15 297 1 759 121 28 130 chr10 37130231 37130284 -103186481 - L1PA15 LINE L1 -2 6163 6106 2360 100 3 0 chr10 37130284 37130595 -103186170 - AluSx SINE Alu 0 312 1 759 121 28 130 chr10 37130595 37130690 -103186075 - L1PA15 LINE L1 -59 6106 6041 207 0 0 0 chr10 37130690 37130713 -103186052 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 759 121 28 130 chr10 37130713 37130778 -103185987 - L1PA15 LINE L1 -124 6041 5971 1416 159 6 106 chr10 37131333 37131514 -103185251 - AluJo SINE Alu -23 289 152 1784 178 10 0 chr10 37131514 37131823 -103184942 - AluJo SINE Alu 0 312 1 1416 159 6 106 chr10 37131823 37131962 -103184803 - AluJo SINE Alu -160 152 1 21 0 0 0 chr10 37132338 37132359 -103184406 + AT_rich Low_complexity Low_complexity 1 21 0 2252 95 0 23 chr10 37132363 37132668 -103184097 + AluSp SINE Alu 6 303 -10 1781 158 0 4 chr10 37132725 37133004 -103183761 + AluJb SINE Alu 35 312 0 290 325 0 0 chr10 37133123 37133203 -103183562 + L2 LINE L2 3192 3271 -42 2483 246 45 2 chr10 37133214 37133835 -103182930 + MER82 DNA MER2_type 1 648 -5 224 29 0 29 chr10 37134006 37134040 -103182725 + (TTG)n Simple_repeat Simple_repeat 2 34 0 248 373 0 0 chr10 37134104 37134179 -103182586 - L2 LINE L2 -65 3207 3133 3436 148 120 39 chr10 37134508 37134548 -103182217 - MER4D LTR ERV1 -9 863 828 2143 119 0 0 chr10 37134548 37134843 -103181922 + AluSx SINE Alu 1 295 -17 3436 148 120 39 chr10 37134843 37135410 -103181355 - MER4D LTR ERV1 -44 828 173 1821 154 21 0 chr10 37135410 37135696 -103181069 - AluJo SINE Alu -8 304 13 3436 148 120 39 chr10 37135696 37135885 -103180880 - MER4D LTR ERV1 -699 173 1 248 316 40 42 chr10 37135925 37136132 -103180633 - L2 LINE L2 -280 2992 2791 305 217 60 60 chr10 37136187 37136270 -103180495 - MER5A DNA MER1_type -89 100 18 219 158 35 18 chr10 37136310 37136367 -103180398 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 37137310 37137332 -103179433 + AT_rich Low_complexity Low_complexity 1 22 0 962 159 0 0 chr10 37137800 37137957 -103178808 - AluJb SINE Alu -2 310 154 1411 132 5 32 chr10 37138546 37138766 -103177999 + AluSx SINE Alu 1 214 -98 560 295 19 78 chr10 37139245 37139513 -103177252 - MIR SINE MIR -2 260 9 216 67 0 0 chr10 37139881 37139911 -103176854 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 127 0 18 chr10 37140028 37140083 -103176682 - Alu SINE Alu -245 54 1 475 268 57 25 chr10 37140299 37140456 -103176309 - MER5B DNA MER1_type -2 176 15 360 162 44 0 chr10 37140531 37140599 -103176166 - MER5A DNA MER1_type -77 112 42 252 258 0 0 chr10 37140626 37140692 -103176073 - Charlie5 DNA MER1_type -2529 83 18 1229 223 61 41 chr10 37142847 37142940 -103173825 - MER63B DNA MER1_type -642 420 330 2337 125 0 0 chr10 37142940 37143252 -103173513 + AluSq SINE Alu 1 312 -1 1229 223 61 41 chr10 37143252 37143570 -103173195 - MER63B DNA MER1_type -732 330 1 317 224 87 22 chr10 37144053 37144236 -103172529 - Charlie7 DNA MER1_type 0 2612 2418 635 215 79 51 chr10 37145042 37145256 -103171509 + L1MC5 LINE L1 6694 6913 -1048 1840 164 16 19 chr10 37145410 37145721 -103171044 + AluJb SINE Alu 1 310 -2 785 259 74 56 chr10 37145732 37146288 -103170477 + L1MC5 LINE L1 7017 7582 -379 430 275 7 0 chr10 37146380 37146522 -103170243 + L1MC5 LINE L1 7708 7850 -111 1173 164 5 5 chr10 37146765 37146973 -103169792 - MER2 DNA MER2_type -135 210 3 1979 162 0 7 chr10 37147973 37148281 -103168484 + AluSx SINE Alu 3 308 -4 1627 171 89 0 chr10 37149265 37149580 -103167185 + MER2 DNA MER2_type 1 343 -1 1860 124 4 4 chr10 37149938 37150196 -103166569 + AluSx SINE Alu 1 258 -54 208 180 20 0 chr10 37150205 37150255 -103166510 + A-rich Low_complexity Low_complexity 4 54 0 1871 165 104 15 chr10 37150612 37151005 -103165760 + MSTA LTR MaLR 1 428 0 1197 200 79 110 chr10 37151175 37151320 -103165445 + MLT1D LTR MaLR 1 149 -356 1324 205 76 6 chr10 37151320 37151661 -103165104 + MLT1A1 LTR MaLR 1 365 0 1197 200 79 110 chr10 37151661 37152035 -103164730 + MLT1D LTR MaLR 149 504 -1 446 221 177 0 chr10 37152138 37152251 -103164514 + FLAM_A SINE Alu 1 133 0 1391 167 59 38 chr10 37153614 37153901 -103162864 - AluJo SINE Alu -19 293 1 1900 152 30 0 chr10 37155331 37155633 -103161132 + AluSx SINE Alu 1 311 -1 261 75 0 0 chr10 37157021 37157061 -103159704 + (A)n Simple_repeat Simple_repeat 1 40 0 464 165 10 19 chr10 37158920 37159023 -103157742 - ORSL DNA AcHobo -33 242 141 314 213 21 53 chr10 37159129 37159223 -103157542 - ORSL DNA AcHobo -184 91 1 715 245 0 19 chr10 37159409 37159617 -103157148 + Charlie2 DNA MER1_type 1881 2084 -778 * 1378 186 10 10 chr10 37159613 37159919 -103156846 + MER89 LTR ERV1 254 559 0 225 170 151 28 chr10 37160019 37160125 -103156640 + Charlie2 DNA MER1_type 2443 2561 -301 1234 251 52 26 chr10 37160271 37160808 -103155957 - L1MC5 LINE L1 -173 7788 7238 915 189 11 0 chr10 37160841 37161021 -103155744 - MSTD LTR MaLR 0 396 215 939 205 11 5 chr10 37161218 37161408 -103155357 - AluJb SINE Alu -15 297 107 557 198 0 0 chr10 37161477 37161583 -103155182 - MSTD LTR MaLR -290 106 1 1293 250 73 39 chr10 37161583 37162144 -103154621 - L1MC5 LINE L1 -746 7215 6636 21 0 0 0 chr10 37162574 37162595 -103154170 + AT_rich Low_complexity Low_complexity 1 21 0 2126 103 0 10 chr10 37162778 37163069 -103153696 - AluSg SINE Alu -22 288 1 707 224 99 10 chr10 37163248 37163449 -103153316 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr10 37165303 37165327 -103151438 + AT_rich Low_complexity Low_complexity 1 24 0 2086 99 31 27 chr10 37165461 37165755 -103151010 - AluSx SINE Alu -17 295 1 218 289 0 0 chr10 37166981 37167033 -103149732 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 4044 207 71 63 chr10 37167109 37167191 -103149574 + L1MC4a LINE L1 6335 6415 -1393 192 40 0 0 chr10 37167191 37167216 -103149549 + (CA)n Simple_repeat Simple_repeat 1 25 0 4044 207 71 63 chr10 37167216 37167357 -103149408 + L1MC4a LINE L1 6415 6553 -1255 2160 138 0 0 chr10 37167357 37167669 -103149096 - AluSx SINE Alu 0 312 1 4044 207 71 63 chr10 37167669 37168906 -103147859 + L1MC4a LINE L1 6553 7808 0 23 68 0 0 chr10 37168906 37168950 -103147815 + AT_rich Low_complexity Low_complexity 1 44 0 2183 109 3 3 chr10 37169022 37169311 -103147454 + AluSx SINE Alu 1 292 -20 576 0 0 0 chr10 37169311 37169375 -103147390 + (CATAA)n Simple_repeat Simple_repeat 2 65 0 2183 109 3 3 chr10 37169375 37169389 -103147376 + AluSx SINE Alu 291 304 -8 806 240 23 27 chr10 37170048 37170269 -103146496 - MER58A DNA MER1_type -1 223 4 180 0 0 0 chr10 37170854 37170874 -103145891 + (A)n Simple_repeat Simple_repeat 1 20 0 227 308 55 75 chr10 37171332 37171478 -103145287 + MIR SINE MIR 5 147 -115 1275 257 57 14 chr10 37171488 37171927 -103144838 + MLT1D LTR MaLR 4 461 -44 2250 113 0 3 chr10 37175293 37175595 -103141170 + AluSc SINE Alu 3 303 -6 197 235 39 0 chr10 37177958 37178009 -103138756 + MIR SINE MIR 73 125 -83 270 0 0 0 chr10 37178017 37178047 -103138718 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14376 142 59 13 chr10 37178978 37179218 -103137547 - Tigger2 DNA MER2_type 0 2718 2491 2224 121 0 3 chr10 37179218 37179523 -103137242 - AluSx SINE Alu -7 305 2 14376 142 59 13 chr10 37179523 37181878 -103134887 - Tigger2 DNA MER2_type -227 2491 2 1760 168 45 6 chr10 37182337 37182670 -103134095 - MER7A DNA MER2_type 0 346 3 1422 142 0 0 chr10 37182712 37182930 -103133835 + L1PA16 LINE L1 5941 6158 -8 2125 120 7 3 chr10 37183014 37183314 -103133451 + AluSx SINE Alu 1 301 -11 1439 54 0 0 chr10 37183600 37183768 -103132997 + AluY SINE Alu 127 294 -17 370 322 15 16 chr10 37183899 37184057 -103132708 + MIR SINE MIR 18 149 -59 2074 142 0 3 chr10 37184218 37184507 -103132258 + AluSx SINE Alu 1 288 -24 2044 105 49 3 chr10 37184980 37185265 -103131500 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 37185694 37185715 -103131050 + AT_rich Low_complexity Low_complexity 1 21 0 1505 196 34 14 chr10 37186494 37186785 -103129980 - AluJo SINE Alu -15 297 1 500 65 13 13 chr10 37187581 37187658 -103129107 + Alu SINE Alu 225 301 -8 972 267 57 0 chr10 37188401 37188716 -103128049 + MER46C DNA MER2_type 1 333 -5 1263 233 48 22 chr10 37188726 37188877 -103127888 - MER63B DNA MER1_type -634 428 283 2082 104 31 3 chr10 37188877 37189166 -103127599 + AluSx SINE Alu 1 297 -15 1263 233 48 22 chr10 37189166 37189426 -103127339 - MER63B DNA MER1_type -779 283 6 405 213 0 0 chr10 37189704 37189779 -103126986 + L2 LINE L2 3238 3312 -1 21 0 0 0 chr10 37189815 37189836 -103126929 + AT_rich Low_complexity Low_complexity 1 21 0 1273 194 0 87 chr10 37189963 37190272 -103126493 + AluJo SINE Alu 1 282 -30 24 0 0 0 chr10 37190539 37190563 -103126202 + AT_rich Low_complexity Low_complexity 1 24 0 916 137 7 0 chr10 37191384 37191530 -103125235 - FRAM SINE Alu -19 147 1 252 0 0 0 chr10 37191693 37191721 -103125044 + (TG)n Simple_repeat Simple_repeat 2 29 0 1038 183 39 0 chr10 37191883 37192091 -103124674 + MER20 DNA MER1_type 2 217 -2 830 166 0 14 chr10 37192729 37192874 -103123891 + AluJb SINE Alu 163 305 -7 770 139 39 0 chr10 37194115 37194244 -103122521 + MER5A DNA MER1_type 1 134 -55 307 320 51 26 chr10 37194147 37194303 -103122462 - MER5A DNA MER1_type -23 166 7 * 215 274 80 44 chr10 37194348 37194461 -103122304 - MIR SINE MIR -43 219 103 2188 106 0 10 chr10 37195144 37195436 -103121329 - AluSx SINE Alu -23 289 1 21 71 0 0 chr10 37195635 37195677 -103121088 + AT_rich Low_complexity Low_complexity 1 42 0 2109 120 0 3 chr10 37195814 37196106 -103120659 + AluSg SINE Alu 1 291 -19 1751 169 0 33 chr10 37197784 37198086 -103118679 + AluSx SINE Alu 4 295 -17 207 0 0 0 chr10 37199059 37199082 -103117683 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1686 152 39 7 chr10 37199803 37200086 -103116679 - AluJo SINE Alu -20 292 1 1372 174 52 7 chr10 37201703 37201973 -103114792 - AluJo SINE Alu -30 282 1 2125 125 0 20 chr10 37201999 37202302 -103114463 + AluSq SINE Alu 1 297 -16 346 81 210 0 chr10 37202433 37202495 -103114270 + MADE1 DNA Mariner 6 80 0 1844 158 33 6 chr10 37204529 37204865 -103111900 + L1MC1 LINE L1 5979 6323 -10 2471 84 0 0 chr10 37205946 37206254 -103110511 - AluY SINE Alu -3 308 1 239 385 37 9 chr10 37206813 37206922 -103109843 + L2 LINE L2 3200 3311 -2 606 128 0 11 chr10 37206953 37207047 -103109718 + FLAM_C SINE Alu 27 119 -24 617 137 11 0 chr10 37207054 37207149 -103109616 - AluSp/q SINE Alu -15 298 203 1476 51 0 0 chr10 37207261 37207438 -103109327 - AluY SINE Alu -134 177 1 25 51 0 0 chr10 37207576 37207615 -103109150 + AT_rich Low_complexity Low_complexity 1 39 0 316 326 59 27 chr10 37207863 37208050 -103108715 + MIR SINE MIR 57 249 -13 3021 177 40 23 chr10 37210019 37210208 -103106557 + L1M1 LINE L1 4559 4743 -1557 2218 86 0 40 chr10 37210208 37210532 -103106233 + AluY SINE Alu 1 311 0 3021 177 40 23 chr10 37210532 37211368 -103105397 + L1M1 LINE L1 4743 5605 -695 1343 124 11 0 chr10 37211368 37211553 -103105212 + AluSx SINE Alu 21 207 -105 198 0 0 0 chr10 37211767 37211789 -103104976 + (T)n Simple_repeat Simple_repeat 1 22 0 1236 115 37 13 chr10 37211800 37212143 -103104622 - MLT1B LTR MaLR 0 390 1 505 182 152 0 chr10 37212373 37212472 -103104293 - AluJb SINE Alu -195 117 4 495 248 0 9 chr10 37212546 37212655 -103104110 - MER5A DNA MER1_type -75 114 7 3319 191 60 4 chr10 37212703 37213419 -103103346 - LTR39 LTR ERV1 -27 756 1 266 257 14 0 chr10 37213421 37213491 -103103274 - MER45A DNA AcHobo -29 149 79 1815 128 78 0 chr10 37214032 37214313 -103102452 + AluSg SINE Alu 7 309 -1 2070 104 10 17 chr10 37214464 37214761 -103102004 - AluSp SINE Alu -18 295 1 249 108 0 0 chr10 37215867 37215904 -103100861 + (A)n Simple_repeat Simple_repeat 1 37 0 183 42 0 0 chr10 37218345 37218369 -103098396 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 541 167 31 0 chr10 37218373 37218469 -103098296 + MER45A DNA AcHobo 80 178 0 843 243 97 8 chr10 37218874 37218971 -103097794 - MER2 DNA MER2_type 0 345 258 2367 87 3 0 chr10 37218971 37219270 -103097495 - AluSx SINE Alu -12 300 1 843 243 97 8 chr10 37219270 37219439 -103097326 - MER2 DNA MER2_type -87 258 55 1177 195 42 35 chr10 37219983 37220244 -103096521 - AluJo SINE Alu -16 296 34 271 41 41 0 chr10 37222238 37222287 -103094478 - AluSc SINE Alu -1 298 248 1221 174 17 0 chr10 37222389 37222625 -103094140 - L1 LINE L1 -1173 4973 4734 884 132 0 23 chr10 37222651 37222780 -103093985 - FLAM_C SINE Alu -17 126 1 1179 158 14 38 chr10 37222781 37222990 -103093775 + AluJo SINE Alu 109 312 0 2048 98 0 54 chr10 37223671 37223968 -103092797 + AluSx SINE Alu 1 281 -31 246 62 0 0 chr10 37223969 37224001 -103092764 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 201 121 0 0 chr10 37224463 37224496 -103092269 + (A)n Simple_repeat Simple_repeat 1 33 0 508 121 0 30 chr10 37226528 37226627 -103090138 - AluSg/x SINE Alu 0 312 217 1202 126 0 76 chr10 37226727 37226950 -103089815 + AluSp SINE Alu 102 307 -6 1942 123 18 0 chr10 37226955 37227232 -103089533 + AluSg SINE Alu 1 282 -28 623 46 11 0 chr10 37227236 37227323 -103089442 + (CAGAA)n Simple_repeat Simple_repeat 2 89 0 1263 192 55 48 chr10 37227333 37227625 -103089140 + AluJo SINE Alu 1 294 -18 27 0 0 0 chr10 37228062 37228089 -103088676 + GC_rich Low_complexity Low_complexity 1 27 0 207 220 0 0 chr10 37228192 37228242 -103088523 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1875 127 4 4 chr10 37228281 37228549 -103088216 + AluSx SINE Alu 1 268 -44 867 151 0 0 chr10 37230086 37230212 -103086553 + FLAM_C SINE Alu 1 126 -17 451 148 99 0 chr10 37230313 37230394 -103086371 - L2 LINE L2 0 3313 3225 3496 108 44 2 chr10 37230402 37230975 -103085790 + L1PB4 LINE L1 5540 6136 -20 211 294 98 39 chr10 37231802 37231904 -103084861 + MIR3 SINE MIR 49 156 -52 195 254 0 55 chr10 37231958 37232013 -103084752 - MER5B DNA MER1_type -68 110 59 1379 167 29 12 chr10 37233329 37233575 -103083190 + AluJo SINE Alu 42 291 -21 833 237 0 0 chr10 37233932 37234084 -103082681 + FRAM SINE Alu 1 152 -24 1407 146 26 0 chr10 37235175 37235401 -103081364 + AluSg/x SINE Alu 70 301 -9 1116 174 167 3 chr10 37235596 37235883 -103080882 + MER66A LTR ERV1 84 417 -61 405 141 0 0 chr10 37236049 37236120 -103080645 + AluSc SINE Alu 235 305 -4 1468 186 6 48 chr10 37236418 37236729 -103080036 - AluJo SINE Alu -14 298 1 1144 107 6 0 chr10 37237032 37237191 -103079574 - AluSc SINE Alu -18 291 132 2103 131 0 3 chr10 37237191 37237482 -103079283 - AluSc SINE Alu -14 295 6 273 216 54 14 chr10 37237974 37238048 -103078717 + MLT1L LTR MaLR 7 83 -532 332 307 127 0 chr10 37238249 37238399 -103078366 + MLT1L LTR MaLR 423 591 -24 720 230 70 32 chr10 37238546 37238733 -103078032 - MIR SINE MIR -68 194 1 2277 98 13 0 chr10 37238919 37239224 -103077541 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 37241031 37241060 -103075705 + AT_rich Low_complexity Low_complexity 1 29 0 349 298 70 9 chr10 37242346 37242460 -103074305 + MIR SINE MIR 20 140 -122 23 0 0 0 chr10 37242986 37243009 -103073756 + AT_rich Low_complexity Low_complexity 1 23 0 2396 69 0 0 chr10 37243085 37243373 -103073392 - AluY SINE Alu -22 289 2 367 240 42 0 chr10 37244268 37244364 -103072401 - Charlie1 DNA MER1_type -40 2721 2622 * 601 256 59 27 chr10 37244352 37244571 -103072194 - Charlie1 DNA MER1_type -2524 237 12 1706 181 7 13 chr10 37244688 37244998 -103071767 + AluJo SINE Alu 1 308 -4 219 228 89 13 chr10 37245091 37245170 -103071595 - MIR SINE MIR -20 242 158 741 172 8 16 chr10 37245884 37246006 -103070759 + FLAM_C SINE Alu 1 121 -12 2103 121 3 19 chr10 37246018 37246331 -103070434 + AluSx SINE Alu 4 311 -1 1635 186 16 7 chr10 37247176 37247482 -103069283 - AluJo SINE Alu -3 309 1 187 276 143 0 chr10 37247705 37247803 -103068962 - L2 LINE L2 -5 3267 3156 202 246 261 41 chr10 37248201 37248396 -103068369 - L2 LINE L2 -556 2758 2521 278 264 33 0 chr10 37250290 37250381 -103066384 - L1ME LINE L1 -469 5652 5559 1487 140 5 0 chr10 37250383 37250605 -103066160 - AluSg/x SINE Alu -2 308 86 1359 124 0 0 chr10 37250607 37250785 -103065980 - AluSx SINE Alu -134 178 1 248 0 31 0 chr10 37251232 37251264 -103065501 + (TG)n Simple_repeat Simple_repeat 2 34 0 1366 168 18 46 chr10 37251264 37251544 -103065221 - AluJo SINE Alu -40 272 1 1832 111 111 7 chr10 37251725 37252004 -103064761 - AluSg SINE Alu 0 310 3 394 63 63 0 chr10 37255000 37255079 -103061686 + CT-rich Low_complexity Low_complexity 2 85 0 228 327 95 47 chr10 37255557 37255768 -103060997 - MIR SINE MIR -33 229 9 3777 197 33 46 chr10 37257192 37258046 -103058719 + L1MA7 LINE L1 5410 6252 -39 1740 136 80 0 chr10 37258854 37259118 -103057647 - AluSg SINE Alu -25 285 1 1571 187 27 0 chr10 37259221 37259483 -103057282 + AluJb SINE Alu 1 269 -43 1546 174 4 4 chr10 37260003 37260262 -103056503 + AluJo SINE Alu 1 259 -53 351 0 0 0 chr10 37260276 37260315 -103056450 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1851 154 23 7 chr10 37260375 37260674 -103056091 + AluJb SINE Alu 2 305 -7 527 230 31 56 chr10 37262546 37262707 -103054058 + MER58B DNA MER1_type 184 340 -1 1680 184 65 96 chr10 37263305 37263783 -103052982 - MLT1C LTR MaLR -4 463 1 1599 167 23 49 chr10 37263790 37264095 -103052670 + AluJo SINE Alu 1 297 -15 251 256 0 44 chr10 37264689 37264779 -103051986 + GA-rich Low_complexity Low_complexity 2 87 0 2327 91 7 0 chr10 37265190 37265487 -103051278 - AluSp SINE Alu -14 299 1 544 134 12 0 chr10 37267699 37267781 -103048984 - MER66A LTR ERV1 0 478 396 2536 70 0 3 chr10 37267781 37268093 -103048672 + AluY SINE Alu 1 311 0 666 264 76 30 chr10 37268117 37268420 -103048345 - MER97c DNA MER1_type? 0 1090 774 22 0 0 0 chr10 37268562 37268584 -103048181 + AT_rich Low_complexity Low_complexity 1 22 0 253 155 41 31 chr10 37268591 37268688 -103048077 + (TA)n Simple_repeat Simple_repeat 2 99 0 2561 122 36 5 chr10 37268692 37269084 -103047681 - MLT2A1 LTR ERVL -40 404 1 448 259 17 0 chr10 37270444 37270560 -103046205 - L1ME3 LINE L1 -56 6106 5989 548 217 101 35 chr10 37270577 37270775 -103045990 - L1ME3 LINE L1 -242 5928 5718 593 226 122 54 chr10 37270781 37271077 -103045688 - MER97c DNA MER1_type? 0 1090 775 1047 208 44 100 chr10 37271430 37271820 -103044945 - MER97a DNA MER1_type? -289 605 238 1384 170 7 73 chr10 37271835 37272135 -103044630 - AluJo SINE Alu -32 280 1 638 249 67 44 chr10 37272152 37272163 -103044602 - MER97c DNA MER1_type? -850 240 231 1596 158 0 85 chr10 37272163 37272492 -103044273 + AluJb SINE Alu 1 301 -11 638 249 67 44 chr10 37272492 37272705 -103044060 - MER97c DNA MER1_type? -859 231 11 481 198 105 129 chr10 37272839 37272915 -103043850 - L1M4 LINE L1 -1925 4221 4145 1778 150 3 39 chr10 37272915 37273221 -103043544 - AluJb SINE Alu -17 295 1 481 198 105 129 chr10 37273221 37273392 -103043373 - L1M4 LINE L1 -2001 4145 3980 21 0 0 0 chr10 37274725 37274746 -103042019 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 37274921 37274943 -103041822 + AT_rich Low_complexity Low_complexity 1 22 0 927 172 0 12 chr10 37275669 37275832 -103040933 + AluJo SINE Alu 127 287 -25 29 47 0 0 chr10 37275832 37275875 -103040890 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 37275955 37275996 -103040769 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr10 37276775 37276797 -103039968 + AT_rich Low_complexity Low_complexity 1 22 0 240 200 0 0 chr10 37276841 37276896 -103039869 + CT-rich Low_complexity Low_complexity 2 56 0 2053 119 11 0 chr10 37277100 37277385 -103039380 + AluSx SINE Alu 1 288 -24 2290 104 0 0 chr10 37277385 37277682 -103039083 + AluSg SINE Alu 1 297 -13 5580 105 57 6 chr10 37278293 37278433 -103038332 - L1MA3 LINE L1 0 6305 6174 1833 136 0 11 chr10 37278433 37278705 -103038060 - AluSx SINE Alu -43 269 1 5580 105 57 6 chr10 37278705 37278996 -103037769 - L1MA3 LINE L1 -131 6174 5899 1988 141 10 0 chr10 37278996 37279295 -103037470 - AluSx SINE Alu -10 302 1 5580 105 57 6 chr10 37279295 37279730 -103037035 - L1MA3 LINE L1 -406 5899 5394 24 0 0 0 chr10 37280976 37281000 -103035765 + AT_rich Low_complexity Low_complexity 1 24 0 394 288 45 8 chr10 37282402 37282534 -103034231 + L1MC5 LINE L1 7759 7895 -66 181 315 55 48 chr10 37282611 37282757 -103034008 - MIR3 SINE MIR -37 171 25 294 331 65 0 chr10 37282903 37283042 -103033723 - MIR SINE MIR -3 259 112 232 231 394 0 chr10 37283043 37283251 -103033514 + LTR50 LTR ERVL 1 290 -505 198 103 0 0 chr10 37283331 37283360 -103033405 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 2486 67 0 0 chr10 37283719 37284017 -103032748 - AluY SINE Alu -13 298 1 2301 92 0 0 chr10 37284043 37284326 -103032439 + AluSx SINE Alu 1 310 0 244 0 0 0 chr10 37284326 37284353 -103032412 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 586 169 127 17 chr10 37284638 37284756 -103032009 - FLAM_C SINE Alu -1 132 2 582 252 84 0 chr10 37287419 37287574 -103029191 + MIR SINE MIR 21 188 -74 1137 156 12 0 chr10 37288066 37288239 -103028526 - FAM SINE Alu 0 175 1 675 207 8 8 chr10 37289674 37289795 -103026970 + FLAM_A SINE Alu 1 121 -12 2360 106 3 0 chr10 37290836 37291148 -103025617 - AluSp SINE Alu 0 313 1 5789 155 99 6 chr10 37291457 37292249 -103024516 + Tigger3b DNA MER2_type 1 923 -2105 200 35 35 0 chr10 37292249 37292278 -103024487 + (CTCA)n Simple_repeat Simple_repeat 1 30 0 5789 155 99 6 chr10 37292278 37292579 -103024186 + Tigger3b DNA MER2_type 923 1195 -36 663 217 17 0 chr10 37292595 37292710 -103024055 - FLAM_C SINE Alu -22 121 5 1590 164 93 50 chr10 37293206 37293529 -103023236 + MER1B DNA MER1_type 1 337 0 350 248 50 30 chr10 37294625 37294726 -103022039 - L2 LINE L2 -20 3293 3191 863 174 0 112 chr10 37295060 37295284 -103021481 + AluJo SINE Alu 85 283 -29 2083 131 0 0 chr10 37296461 37296743 -103020022 + AluSx SINE Alu 1 282 -30 437 33 0 17 chr10 37296746 37296806 -103019959 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 2045 144 3 0 chr10 37296814 37297113 -103019652 + AluJo SINE Alu 1 300 -12 1606 126 19 41 chr10 37297536 37297806 -103018959 + AluJo SINE Alu 24 287 -25 1837 146 3 21 chr10 37297866 37298154 -103018611 + AluSx SINE Alu 4 286 -26 444 93 0 0 chr10 37298154 37298229 -103018536 + (CA)n Simple_repeat Simple_repeat 2 76 0 283 195 58 0 chr10 37298367 37298454 -103018311 + MER20B DNA MER1_type 538 629 -154 21 0 0 0 chr10 37298493 37298514 -103018251 + AT_rich Low_complexity Low_complexity 1 21 0 385 181 43 43 chr10 37298568 37298684 -103018081 + MER20B DNA MER1_type 667 782 -1 189 154 0 96 chr10 37299028 37299080 -103017685 + MIR SINE MIR 105 151 -57 756 181 98 0 chr10 37299454 37299587 -103017178 - FRAM SINE Alu -30 146 1 2429 103 0 0 chr10 37300057 37300368 -103016397 + AluSq SINE Alu 1 311 -2 1198 121 59 151 chr10 37302294 37302599 -103014166 - AluJo SINE Alu -15 297 21 963 93 78 0 chr10 37302726 37302855 -103013910 - MER85 DNA T2_type 0 139 1 535 233 170 31 chr10 37302946 37303169 -103013596 - MIR SINE MIR -6 256 3 2219 106 7 0 chr10 37303434 37303737 -103013028 + AluSg SINE Alu 1 305 -5 369 0 0 0 chr10 37303998 37304039 -103012726 + (TG)n Simple_repeat Simple_repeat 2 42 0 1837 83 13 103 chr10 37304039 37304339 -103012426 - AluSg SINE Alu -27 283 11 1964 138 10 21 chr10 37304368 37304658 -103012107 - AluSx SINE Alu -25 287 1 1493 161 54 54 chr10 37304695 37304975 -103011790 + AluJb SINE Alu 1 280 -32 25 0 0 0 chr10 37305595 37305620 -103011145 + AT_rich Low_complexity Low_complexity 1 25 0 2421 87 0 3 chr10 37305667 37305977 -103010788 - AluSg SINE Alu -1 309 1 224 382 100 6 chr10 37306018 37306188 -103010577 - MIR3 SINE MIR -4 204 19 909 251 65 30 chr10 37307285 37307548 -103009217 + MLT1J LTR MaLR 200 471 -40 641 100 20 40 chr10 37308214 37308314 -103008451 + AluY SINE Alu 208 305 -6 3193 145 94 55 chr10 37308316 37308627 -103008138 + L1MA5 LINE L1 5607 5904 -396 1514 191 31 7 chr10 37308627 37308921 -103007844 + AluJo SINE Alu 1 301 -11 3193 145 94 55 chr10 37308921 37308945 -103007820 + L1MA5 LINE L1 5904 5926 -374 2080 115 10 13 chr10 37308945 37309258 -103007507 + AluSx SINE Alu 1 312 0 3193 145 94 55 chr10 37309258 37309589 -103007176 + L1MA5 LINE L1 5926 6300 0 22 56 0 0 chr10 37309821 37309857 -103006908 + AT_rich Low_complexity Low_complexity 1 36 0 2268 121 3 0 chr10 37311016 37311321 -103005444 - AluSx SINE Alu -6 306 1 270 285 173 22 chr10 37311661 37311840 -103004925 - L3 LINE CR1 -12 1565 1360 181 0 0 65 chr10 37313137 37313168 -103003597 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1484 140 13 4 chr10 37313234 37313463 -103003302 - AluSx SINE Alu -81 231 1 237 65 0 0 chr10 37314785 37314816 -103001949 + (T)n Simple_repeat Simple_repeat 1 31 0 2203 101 3 3 chr10 37315668 37315965 -103000800 + AluY SINE Alu 1 297 -14 1791 174 7 3 chr10 37317897 37318201 -102998564 + AluJo SINE Alu 1 305 -7 1841 155 3 10 chr10 37318746 37319072 -102997693 - AluJb SINE Alu 0 312 1 1739 159 50 0 chr10 37320488 37320790 -102995975 + L1PB4 LINE L1 5838 6154 -2 1986 130 7 3 chr10 37320976 37321269 -102995496 + AluSx SINE Alu 1 294 -18 209 171 0 0 chr10 37321272 37321307 -102995458 + G-rich Low_complexity Low_complexity 3 37 0 2816 13 0 0 chr10 37321395 37321696 -102995069 + L1PA2 LINE L1 5855 6155 0 680 208 174 17 chr10 37321808 37322049 -102994716 + MER5C DNA MER1_type 43 321 -3 453 118 49 14 chr10 37322324 37322468 -102994297 + (TA)n Simple_repeat Simple_repeat 1 149 0 902 139 0 29 chr10 37322480 37322617 -102994148 - FLAM_C SINE Alu 0 133 1 632 110 0 0 chr10 37322973 37323055 -102993710 + AluSp SINE Alu 142 223 -90 1018 171 77 124 chr10 37323269 37323595 -102993170 + AluJo SINE Alu 1 312 0 195 42 0 0 chr10 37323638 37323662 -102993103 + (TGG)n Simple_repeat Simple_repeat 1 24 0 1581 226 27 0 chr10 37323763 37324099 -102992666 + L1PA16 LINE L1 5821 6165 -1 463 173 189 8 chr10 37324099 37324226 -102992539 - MIR SINE MIR -85 177 28 242 262 64 52 chr10 37325260 37325432 -102991333 + L2 LINE L2 2562 2735 -579 897 117 0 0 chr10 37325469 37325606 -102991159 + (CA)n Simple_repeat Simple_repeat 2 138 0 213 256 0 0 chr10 37325615 37325658 -102991107 + L2 LINE L2 3210 3252 -20 2097 135 0 0 chr10 37326291 37326588 -102990177 - AluSx SINE Alu -15 297 1 2196 123 0 16 chr10 37327148 37327457 -102989308 + AluSq SINE Alu 1 304 -9 2337 107 0 0 chr10 37327461 37327771 -102988994 + AluSx SINE Alu 1 310 -2 1972 144 10 3 chr10 37328541 37328847 -102987918 - AluJb SINE Alu -4 308 1 210 37 0 0 chr10 37330629 37330656 -102986109 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 838 124 0 0 chr10 37330801 37330914 -102985851 + AluSp/q SINE Alu 181 293 -20 5289 112 60 70 chr10 37330914 37331263 -102985502 + L1PA15 LINE L1 4980 5331 -834 2119 118 7 0 chr10 37331263 37331552 -102985213 + AluSq SINE Alu 1 291 -22 5289 112 60 70 chr10 37331552 37332384 -102984381 + L1PA15 LINE L1 5331 6152 -13 658 121 0 0 chr10 37332396 37332479 -102984286 + AluJb SINE Alu 178 260 -52 23 0 0 0 chr10 37332483 37332506 -102984259 + AT_rich Low_complexity Low_complexity 1 23 0 228 181 0 42 chr10 37332808 37332880 -102983885 + GA-rich Low_complexity Low_complexity 3 71 0 1708 74 28 0 chr10 37333141 37333356 -102983409 - AluY SINE Alu -6 305 85 279 288 68 25 chr10 37333495 37333613 -102983152 - L2 LINE L2 -9 3263 3141 2303 105 0 10 chr10 37333865 37334169 -102982596 + AluSg SINE Alu 1 301 -9 198 103 0 0 chr10 37334230 37334259 -102982506 + (TCC)n Simple_repeat Simple_repeat 2 30 0 282 167 0 0 chr10 37335666 37335726 -102981039 + (CA)n Simple_repeat Simple_repeat 2 61 0 392 248 23 70 chr10 37336092 37336221 -102980544 + MER5A DNA MER1_type 58 180 -9 1484 271 135 45 chr10 37336740 37337171 -102979594 - HAL1 LINE L1 -948 1559 1168 1603 183 20 20 chr10 37337171 37337471 -102979294 - AluJo SINE Alu -12 300 1 1484 271 135 45 chr10 37337471 37338177 -102978588 - HAL1 LINE L1 -1339 1168 319 825 202 45 6 chr10 37338198 37338376 -102978389 - AluJb SINE Alu -8 304 120 24 54 0 18 chr10 37338376 37338406 -102978359 + AT_rich Low_complexity Low_complexity 1 31 -24 2185 87 11 11 chr10 37338406 37338693 -102978072 - AluSq SINE Alu -26 287 1 24 54 0 18 chr10 37338693 37338718 -102978047 + AT_rich Low_complexity Low_complexity 31 55 0 639 174 43 22 chr10 37338724 37338862 -102977903 - AluJo SINE Alu -81 231 91 1453 149 0 0 chr10 37338967 37339175 -102977590 - AluSx SINE Alu -102 210 3 471 215 28 0 chr10 37339200 37339307 -102977458 + L1M4 LINE L1 2664 2773 -3373 1131 159 5 16 chr10 37339864 37340053 -102976712 + AluJo SINE Alu 1 187 -125 4258 188 5 2 chr10 37340054 37340878 -102975887 + L1P LINE L1 4168 4993 -1153 1077 113 7 0 chr10 37340880 37341022 -102975743 + AluSq/x SINE Alu 1 143 -170 1723 174 49 26 chr10 37341123 37341473 -102975292 + THE1C LTR MaLR 18 375 0 860 162 0 0 chr10 37341821 37341957 -102974808 - FLAM_C SINE Alu -7 136 1 1090 196 20 5 chr10 37342943 37343170 -102973595 - AluJo SINE Alu 0 313 84 250 258 38 76 chr10 37344737 37344869 -102971896 + L2 LINE L2 3183 3309 -4 247 231 50 0 chr10 37344928 37345012 -102971753 + MIR SINE MIR 63 142 -66 2094 122 3 0 chr10 37345022 37345308 -102971457 - AluSx SINE Alu -25 287 1 361 282 285 14 chr10 37346055 37346399 -102970366 + L2 LINE L2 2877 3313 0 461 267 222 9 chr10 37346939 37347164 -102969601 + L2 LINE L2 1748 2020 -1294 200 91 68 0 chr10 37347410 37347454 -102969311 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 289 220 0 0 chr10 37347768 37347818 -102968947 + AluJ/monomer SINE Alu 1 50 -250 874 190 0 0 chr10 37347818 37347960 -102968805 + AluJo/FRAM SINE Alu 141 282 -30 2021 137 0 10 chr10 37348775 37349075 -102967690 + AluSx SINE Alu 1 297 -15 652 297 35 18 chr10 37349338 37349419 -102967346 + HAL1 LINE L1 8 86 -2421 387 0 0 0 chr10 37349419 37349462 -102967303 + (TTG)n Simple_repeat Simple_repeat 2 44 0 652 297 35 18 chr10 37349462 37349666 -102967099 + HAL1 LINE L1 86 298 -2209 518 217 11 0 chr10 37349699 37349791 -102966974 + AluJo SINE Alu 2 94 -218 1017 185 0 44 chr10 37449792 37450019 -102866746 + AluJo SINE Alu 87 303 -9 243 125 0 148 chr10 37450031 37450119 -102866646 + L1MC3 LINE L1 6837 6911 -874 2110 127 7 0 chr10 37450195 37450494 -102866271 - AluSq SINE Alu -12 301 1 1482 122 13 4 chr10 37450496 37450725 -102866040 + LTR59 LTR ERV1 320 550 -47 882 137 14 14 chr10 37450759 37450898 -102865867 + FRAM SINE Alu 30 168 -8 888 146 146 0 chr10 37450899 37451063 -102865702 + L1MC3 LINE L1 7212 7399 -386 1805 171 7 0 chr10 37451064 37451393 -102865372 + AluSx SINE Alu 2 332 0 595 167 0 11 chr10 37451825 37451915 -102864850 + AluJ/FLAM SINE Alu 3 91 -221 2065 125 3 10 chr10 37452033 37452330 -102864435 + AluSq SINE Alu 1 295 -18 2083 120 3 3 chr10 37452495 37452795 -102863970 + AluSc SINE Alu 1 300 -9 1345 136 120 44 chr10 37452902 37453152 -102863613 + AluSx SINE Alu 36 304 -8 963 145 0 0 chr10 37453359 37453490 -102863275 - FLAM_C SINE Alu -2 131 1 37 0 0 0 chr10 37453500 37453537 -102863228 + AT_rich Low_complexity Low_complexity 1 37 0 2359 93 20 0 chr10 37453864 37454165 -102862600 + AluSx SINE Alu 1 307 -5 240 226 32 32 chr10 37454204 37454298 -102862467 - L1MD2 LINE L1 -81 6085 6016 315 122 0 0 chr10 37455349 37455390 -102861375 - Alu SINE Alu -254 49 9 1746 111 21 0 chr10 37455391 37455671 -102861094 + AluSx SINE Alu 50 334 0 2067 156 0 0 chr10 37455674 37455981 -102860784 + AluSx SINE Alu 1 307 -5 2279 111 0 0 chr10 37455987 37456285 -102860480 + AluSg SINE Alu 1 298 -12 1841 151 3 30 chr10 37456530 37456697 -102860068 - AluJo SINE Alu -15 297 140 2722 32 3 0 chr10 37456697 37457007 -102859758 - AluY SINE Alu 0 311 1 1841 151 3 30 chr10 37457007 37457144 -102859621 - AluJo SINE Alu -172 140 1 238 280 119 25 chr10 37457293 37457411 -102859354 - MER69A DNA AcHobo -40 137 9 1556 178 4 0 chr10 37457549 37457808 -102858957 + AluJo SINE Alu 1 260 -52 2055 113 4 0 chr10 37458138 37458413 -102858352 - AluSp SINE Alu -37 276 1 238 280 119 25 chr10 37458644 37458762 -102858003 - MER69A DNA AcHobo -40 137 9 2440 56 0 3 chr10 37458900 37459202 -102857563 + AluY SINE Alu 1 301 -10 1851 74 122 11 chr10 37459213 37459484 -102857281 + AluY SINE Alu 1 301 -10 1632 165 72 44 chr10 37459777 37460060 -102856705 + MLT1A1 LTR MaLR 1 301 -64 2199 86 0 49 chr10 37460060 37460387 -102856378 - AluY SINE Alu 0 311 1 1632 165 72 44 chr10 37460387 37460454 -102856311 + MLT1A1 LTR MaLR 301 365 0 2212 92 3 10 chr10 37460707 37461029 -102855736 - AluY SINE Alu 0 311 1 2531 68 0 0 chr10 37461356 37461666 -102855099 + AluY SINE Alu 1 310 -1 362 332 5 87 chr10 37461803 37461931 -102854834 - L2 LINE L2 -604 2710 2602 1905 155 16 7 chr10 37461931 37462240 -102854525 + AluJb SINE Alu 1 312 0 362 332 5 87 chr10 37462240 37462307 -102854458 - L2 LINE L2 -712 2602 2531 1075 194 95 32 chr10 37462377 37462630 -102854135 - MLT1F LTR MaLR -64 478 210 1500 171 4 0 chr10 37462687 37462927 -102853838 + AluJb SINE Alu 2 242 -70 254 118 0 0 chr10 37462968 37463026 -102853739 + AluJb SINE Alu 250 307 0 813 324 119 18 chr10 37463084 37463623 -102853142 - L2 LINE L2 0 3313 2709 1657 169 52 3 chr10 37463647 37463937 -102852828 + AluJb SINE Alu 1 304 -8 1818 180 7 87 chr10 37463977 37464039 -102852726 - MLT1B LTR MaLR -7 383 318 1995 153 3 7 chr10 37464039 37464346 -102852419 + AluSx SINE Alu 3 308 -4 1818 180 7 87 chr10 37464346 37464699 -102852066 - MLT1B LTR MaLR -72 318 1 685 241 169 23 chr10 37464699 37464965 -102851800 - L2 LINE L2 -654 2660 2356 1714 173 7 23 chr10 37465012 37465313 -102851452 - AluJo SINE Alu -16 296 1 1852 119 0 8 chr10 37465361 37465621 -102851144 + AluSx SINE Alu 1 258 -54 319 358 129 52 chr10 37465718 37465911 -102850854 - HAL1 LINE L1 -2077 430 223 1965 293 39 15 chr10 37465982 37466648 -102850117 + L1MEc LINE L1 40 721 -5675 2071 118 30 0 chr10 37466667 37466963 -102849802 + AluSc SINE Alu 1 305 -4 2118 113 0 10 chr10 37466969 37467260 -102849505 + AluSx SINE Alu 1 288 -24 362 265 31 0 chr10 37467480 37467578 -102849187 + MIR SINE MIR 134 234 -28 215 305 168 0 chr10 37467603 37467698 -102849067 + MIR SINE MIR 114 224 -38 195 204 0 0 chr10 37468905 37468949 -102847816 + A-rich Low_complexity Low_complexity 1 44 0 2246 101 0 10 chr10 37469462 37469760 -102847005 + AluSc SINE Alu 1 295 -14 954 281 96 51 chr10 37470042 37470455 -102846310 - L1ME3A LINE L1 -306 5864 5471 2423 71 0 0 chr10 37470455 37470751 -102846014 + AluY SINE Alu 1 296 -15 2338 52 7 0 chr10 37470753 37471058 -102845707 + AluY SINE Alu 1 311 0 954 281 96 51 chr10 37471058 37471462 -102845303 - L1ME3A LINE L1 -699 5471 5000 271 255 167 0 chr10 37471882 37471984 -102844781 + L2 LINE L2 3195 3313 0 230 252 162 27 chr10 37471991 37472039 -102844726 + L1ME LINE L1 5694 5734 -387 2465 76 0 0 chr10 37472039 37472340 -102844425 + AluY SINE Alu 5 305 -6 230 252 162 27 chr10 37472340 37472402 -102844363 + L1ME LINE L1 5734 5819 -302 225 280 27 13 chr10 37472655 37472730 -102844035 - L1ME4a LINE L1 -86 6035 5960 319 273 211 16 chr10 37473217 37473345 -102843420 + L2 LINE L2 3119 3271 -1 24 0 0 0 chr10 37474113 37474137 -102842628 + AT_rich Low_complexity Low_complexity 1 24 0 747 141 33 0 chr10 37474872 37474993 -102841772 + FLAM_C SINE Alu 1 125 -8 342 316 95 52 chr10 37475314 37475662 -102841103 + L2 LINE L2 2951 3313 0 477 268 60 26 chr10 37475768 37475982 -102840783 - MIR SINE MIR 0 262 31 314 292 100 8 chr10 37475977 37476107 -102840658 - L2 LINE L2 -7 3306 3165 * 2364 82 20 7 chr10 37476793 37477098 -102839667 + AluSx SINE Alu 1 309 -3 2103 100 7 14 chr10 37477230 37477519 -102839246 + AluSx SINE Alu 1 287 -25 5256 122 30 14 chr10 37477541 37477611 -102839154 + Tigger1 DNA MER2_type 1577 1644 -774 2489 168 75 103 chr10 37477611 37478326 -102838439 + LTR34 LTR ERV1 1 695 -4 5256 122 30 14 chr10 37478326 37479084 -102837681 + Tigger1 DNA MER2_type 1644 2418 0 469 270 74 20 chr10 37479156 37479304 -102837461 + MIR SINE MIR 13 168 -94 1576 176 26 26 chr10 37479396 37479708 -102837057 + AluJo SINE Alu 1 312 0 1984 108 52 3 chr10 37480610 37480897 -102835868 + AluSx SINE Alu 1 301 -11 852 153 0 29 chr10 37481189 37481326 -102835439 - FLAM_C SINE Alu 0 133 1 379 231 8 66 chr10 37481393 37481514 -102835251 - MIR SINE MIR -104 158 45 1586 137 4 24 chr10 37482163 37482418 -102834347 + AluJb SINE Alu 41 290 -22 186 294 20 0 chr10 37483258 37483309 -102833456 + MIR SINE MIR 63 114 -148 23 0 0 0 chr10 37483323 37483346 -102833419 + AT_rich Low_complexity Low_complexity 1 23 0 261 156 26 39 chr10 37484206 37484283 -102832482 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 895 128 0 0 chr10 37484291 37484408 -102832357 - FLAM_C SINE Alu -18 125 9 594 127 0 0 chr10 37484833 37484912 -102831853 + AluSc SINE Alu 2 80 -229 2211 102 6 13 chr10 37484912 37485225 -102831540 + AluY SINE Alu 1 311 0 1729 104 4 0 chr10 37485225 37485453 -102831312 + AluSc SINE Alu 71 301 -8 28 0 0 0 chr10 37485831 37485859 -102830906 + AT_rich Low_complexity Low_complexity 1 28 0 2124 93 21 7 chr10 37485881 37486172 -102830593 - AluSx SINE Alu -17 295 1 1066 109 64 0 chr10 37486580 37486736 -102830029 + AluSp SINE Alu 141 306 -7 1853 151 24 3 chr10 37487041 37487332 -102829433 + AluSx SINE Alu 1 297 -15 400 105 2 0 chr10 37487385 37487449 -102829316 + Alu SINE Alu 2 50 -262 255 326 68 7 chr10 37487967 37488114 -102828651 - Charlie8 DNA MER1_type -2190 227 72 * 869 258 62 39 chr10 37488111 37488498 -102828267 + L2 LINE L2 2913 3308 -5 2498 73 0 19 chr10 37488862 37489179 -102827586 - AluY SINE Alu 0 311 1 2391 81 0 0 chr10 37489844 37490139 -102826626 - AluY SINE Alu -16 295 1 473 223 38 143 chr10 37490926 37491062 -102825703 - MIR SINE MIR 0 262 160 2261 114 3 9 chr10 37491062 37491377 -102825388 - AluSq SINE Alu 0 313 1 473 223 38 143 chr10 37491377 37491478 -102825287 - MIR SINE MIR -102 160 50 289 281 85 0 chr10 37491531 37491613 -102825152 - L2 LINE L2 -17 3296 3208 1803 117 78 11 chr10 37491976 37492258 -102824507 - AluSx SINE Alu -11 301 1 447 19 0 0 chr10 37493107 37493159 -102823606 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 51 0 0 chr10 37493166 37493205 -102823560 + AT_rich Low_complexity Low_complexity 1 39 0 1311 168 39 58 chr10 37493337 37493647 -102823118 + L1MB7 LINE L1 5594 5897 -287 458 84 0 0 chr10 37493649 37493720 -102823045 + Alu SINE Alu 239 309 -2 1205 146 5 0 chr10 37493740 37493925 -102822840 + AluSg/x SINE Alu 125 310 0 2455 90 3 0 chr10 37493934 37494244 -102822521 + AluSp SINE Alu 1 311 -2 247 196 0 0 chr10 37494259 37494305 -102822460 + L1MC5 LINE L1 7731 7776 -185 2207 105 3 20 chr10 37494694 37494999 -102821766 - AluSp SINE Alu -13 300 1 1733 145 119 21 chr10 37495423 37495760 -102821005 - Tigger7 DNA MER2_type 0 2587 2218 3740 182 38 34 chr10 37495760 37496520 -102820245 - Tigger7 DNA MER2_type -1717 770 8 1745 142 40 4 chr10 37496832 37497153 -102819612 - AluJb SINE Alu 0 331 1 1341 197 3 47 chr10 37497332 37497631 -102819134 + AluJo SINE Alu 3 288 -24 1169 188 14 9 chr10 37498010 37498223 -102818542 + AluJb SINE Alu 1 214 -98 735 139 8 25 chr10 37498425 37498547 -102818218 + FLAM_C SINE Alu 13 132 -11 518 120 0 0 chr10 37498552 37498627 -102818138 + AluJ/FRAM SINE Alu 220 294 -18 452 240 0 0 chr10 37498628 37498724 -102818041 + L1MB4 LINE L1 5827 5922 -258 265 98 0 0 chr10 37498843 37498884 -102817881 + L1MB3 LINE L1 6128 6168 -15 2363 100 10 0 chr10 37499179 37499488 -102817277 + AluSx SINE Alu 1 312 0 1960 208 60 31 chr10 37499505 37500020 -102816745 + L1MC4 LINE L1 6504 7033 -1009 551 157 20 39 chr10 37500023 37500125 -102816640 + FLAM_C SINE Alu 4 103 -40 2102 130 7 0 chr10 37500298 37500582 -102816183 + AluSq SINE Alu 1 286 -27 2071 135 0 7 chr10 37501141 37501445 -102815320 + AluSg SINE Alu 1 302 -8 2345 95 0 7 chr10 37501450 37501754 -102815011 + AluY SINE Alu 1 302 -9 1614 93 14 9 chr10 37501764 37501980 -102814785 + AluY SINE Alu 1 217 -94 198 0 0 0 chr10 37502000 37502022 -102814743 + (A)n Simple_repeat Simple_repeat 1 22 0 975 127 30 18 chr10 37502162 37502327 -102814438 + L1PA16 LINE L1 6000 6166 0 700 110 30 0 chr10 37502340 37502440 -102814325 + AluSq SINE Alu 86 188 -125 391 141 127 0 chr10 37502440 37502511 -102814254 + AluSc SINE Alu 219 298 -1 753 147 0 0 chr10 37502519 37502628 -102814137 + FLAM_C SINE Alu 2 110 -33 1651 148 47 0 chr10 37502633 37502890 -102813875 - AluJb SINE Alu -43 269 1 463 81 0 54 chr10 37502915 37502989 -102813776 + AluSq/x SINE Alu 62 131 -181 226 88 29 0 chr10 37502989 37503050 -102813715 + Alu SINE Alu 249 310 0 1020 165 60 28 chr10 37503357 37503575 -102813190 - AluJo SINE Alu -1 311 87 195 325 192 17 chr10 37503658 37503778 -102812987 + L2 LINE L2 3173 3313 0 288 269 116 76 chr10 37504346 37504531 -102812234 + L2 LINE L2 3021 3222 -91 2276 94 24 0 chr10 37504531 37504829 -102811936 + AluSc SINE Alu 1 305 -4 288 269 116 76 chr10 37504829 37504918 -102811847 + L2 LINE L2 3222 3306 -7 2283 95 3 0 chr10 37505197 37505491 -102811274 + AluSq SINE Alu 1 295 -18 183 42 0 0 chr10 37506571 37506595 -102810170 + (CGG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr10 37506644 37506681 -102810084 + GC_rich Low_complexity Low_complexity 1 37 0 2042 192 50 62 chr10 37507822 37507927 -102808838 + Charlie1a DNA MER1_type 2 107 -2654 2028 105 7 40 chr10 37507927 37508231 -102808534 - AluSx SINE Alu -18 294 1 1886 138 0 34 chr10 37508239 37508559 -102808206 - AluJo SINE Alu -3 309 1 2042 192 50 62 chr10 37508559 37508919 -102807846 + Charlie1a DNA MER1_type 114 472 -2289 2212 195 92 103 chr10 37508919 37509654 -102807111 + LTR8A LTR ERV1 1 727 0 2042 192 50 62 chr10 37509654 37509693 -102807072 + Charlie1a DNA MER1_type 472 510 -945 1764 161 24 7 chr10 37509695 37509993 -102806772 + AluSq SINE Alu 11 313 0 1150 172 201 9 chr10 37509999 37510342 -102806423 + Charlie1a DNA MER1_type 958 1366 -89 1031 139 0 0 chr10 37510345 37510496 -102806269 + MSTA LTR MaLR 278 428 0 457 128 88 78 chr10 37510496 37510542 -102806223 + Charlie1a DNA MER1_type 1359 1403 -1358 2451 74 3 0 chr10 37510542 37510838 -102805927 - AluSq SINE Alu -16 297 1 457 128 88 78 chr10 37510838 37510887 -102805878 + Charlie1a DNA MER1_type 1403 1455 0 2049 139 3 25 chr10 37511337 37511653 -102805112 + AluSx SINE Alu 1 309 -3 899 199 38 94 chr10 37511881 37511943 -102804822 + L1MEc LINE L1 860 924 -5291 1331 134 29 151 chr10 37511943 37512150 -102804615 - AluYb8 SINE Alu 0 308 160 2316 77 0 48 chr10 37512150 37512460 -102804305 - AluY SINE Alu -16 295 1 1331 134 29 151 chr10 37512460 37512602 -102804163 - AluYb8 SINE Alu -148 160 2 899 199 38 94 chr10 37512602 37512614 -102804151 + L1MEc LINE L1 924 935 -5280 2320 95 13 0 chr10 37512614 37512919 -102803846 - AluSq SINE Alu -4 309 1 899 199 38 94 chr10 37512919 37513169 -102803596 + L1MEc LINE L1 935 1197 -5018 2038 118 0 79 chr10 37513169 37513498 -102803267 + AluSx SINE Alu 1 303 -9 899 199 38 94 chr10 37513498 37513519 -102803246 + L1MEc LINE L1 1197 1218 -4997 2170 104 3 3 chr10 37513519 37513808 -102802957 + AluSg SINE Alu 1 289 -21 899 199 38 94 chr10 37513808 37513851 -102802914 + L1MEc LINE L1 1218 1262 -4953 1825 162 10 7 chr10 37513851 37514159 -102802606 + AluJb SINE Alu 1 309 -3 899 199 38 94 chr10 37514159 37514300 -102802465 + L1MEc LINE L1 1262 1409 -4806 2191 112 0 7 chr10 37514300 37514594 -102802171 + AluSx SINE Alu 1 292 -20 899 199 38 94 chr10 37514594 37514723 -102802042 + L1MEc LINE L1 1409 3543 -2672 2094 104 31 7 chr10 37514924 37515211 -102801554 + AluSc SINE Alu 1 294 -15 282 331 13 13 chr10 37515254 37515411 -102801354 + L1MCc LINE L1 49 205 -6218 1477 161 42 11 chr10 37515509 37515769 -102800996 - AluJo SINE Alu -44 268 1 452 258 93 11 chr10 37515769 37515951 -102800814 + L1MCc LINE L1 2553 2749 -4373 1722 161 40 6 chr10 37516114 37516437 -102800328 - L1MC1 LINE L1 0 6333 6000 380 231 160 6 chr10 37516484 37516640 -102800125 - L1MEd LINE L1 -4885 1234 1055 1240 184 90 30 chr10 37517800 37518116 -102798649 - AluJo SINE Alu 0 332 1 851 213 6 0 chr10 37518471 37518635 -102798130 + AluSg/x SINE Alu 135 299 -10 1797 150 7 17 chr10 37518865 37519159 -102797606 + AluJb SINE Alu 14 304 -8 1398 123 9 23 chr10 37519462 37519681 -102797084 - AluSg/x SINE Alu -11 299 84 235 292 123 32 chr10 37519681 37519835 -102796930 - MIR SINE MIR -32 230 63 1168 152 0 0 chr10 37519907 37520072 -102796693 + AluJb SINE Alu 141 305 -7 258 377 91 7 chr10 37520547 37520701 -102796064 + MIR3 SINE MIR 9 175 -33 366 150 57 121 chr10 37520743 37520862 -102795903 - MIR SINE MIR 0 262 151 1860 163 0 14 chr10 37520862 37521181 -102795584 - AluSx SINE Alu 0 315 1 366 150 57 121 chr10 37521181 37521200 -102795565 - MIR SINE MIR -111 151 132 1147 147 0 12 chr10 37521201 37521371 -102795394 + AluJb SINE Alu 109 276 -36 207 0 0 0 chr10 37521398 37521421 -102795344 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 37521497 37521519 -102795246 + AT_rich Low_complexity Low_complexity 1 22 0 229 200 40 20 chr10 37521774 37521824 -102794941 + L2 LINE L2 3207 3257 -15 219 287 45 45 chr10 37521950 37522107 -102794658 - L2 LINE L2 -932 2382 2226 710 224 8 0 chr10 37522295 37522429 -102794336 + FRAM SINE Alu 20 154 -22 655 146 81 24 chr10 37522545 37522668 -102794097 + AluJo SINE Alu 7 136 -176 191 235 0 0 chr10 37523278 37523329 -102793436 - MIR SINE MIR -74 188 138 887 195 54 34 chr10 37523822 37524027 -102792738 - MER6B DNA MER2_type -1 209 1 2041 103 50 0 chr10 37524073 37524354 -102792411 - AluSx SINE Alu -17 295 1 654 146 55 0 chr10 37524380 37524490 -102792275 - FLAM_C SINE Alu -16 117 2 296 250 0 15 chr10 37524605 37524673 -102792092 + MLT1D LTR MaLR 254 320 -185 677 131 16 16 chr10 37524674 37524796 -102791969 + AluSc SINE Alu 150 271 -38 245 349 0 8 chr10 37524944 37525073 -102791692 + C-rich Low_complexity Low_complexity 4 131 0 206 297 18 27 chr10 37525487 37525598 -102791167 + G-rich Low_complexity Low_complexity 3 112 0 2263 74 28 0 chr10 37526093 37526376 -102790389 - AluSg SINE Alu -19 291 1 2593 51 0 6 chr10 37526751 37527063 -102789702 - AluY SINE Alu -1 310 1 2327 102 3 0 chr10 37528153 37528458 -102788307 + AluSp SINE Alu 1 306 -7 1436 189 40 18 chr10 37528744 37529118 -102787647 + Tigger3(Golem) DNA MER2_type 7 3037 0 2135 88 48 10 chr10 37530172 37530467 -102786298 + AluSg SINE Alu 1 306 -4 2038 128 31 0 chr10 37531548 37531838 -102784927 - AluSx SINE Alu -13 299 1 1087 139 47 0 chr10 37532288 37532460 -102784305 - AluSg/x SINE Alu -7 303 124 2200 108 0 3 chr10 37532461 37532756 -102784009 - AluSx SINE Alu -18 294 1 243 164 98 0 chr10 37532866 37532927 -102783838 - L1MC4 LINE L1 -291 7751 7685 2318 108 0 0 chr10 37532995 37533302 -102783463 + AluSx SINE Alu 1 307 -5 368 103 52 0 chr10 37533682 37533740 -102783025 + U7 snRNA snRNA 1 61 -2 726 189 39 0 chr10 37533848 37533975 -102782790 + FLAM_C SINE Alu 2 133 0 180 0 0 0 chr10 37535029 37535049 -102781716 + (T)n Simple_repeat Simple_repeat 1 20 0 1472 209 26 0 chr10 37535084 37535352 -102781413 - AluJb SINE Alu -37 275 1 22 56 0 0 chr10 37535403 37535439 -102781326 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 37535936 37535961 -102780804 + AT_rich Low_complexity Low_complexity 1 25 0 180 200 0 0 chr10 37536188 37536228 -102780537 + (TA)n Simple_repeat Simple_repeat 2 41 0 1216 118 28 0 chr10 37536763 37536941 -102779824 - AluSg/x SINE Alu -10 300 118 23 54 0 0 chr10 37536941 37536978 -102779787 + AT_rich Low_complexity Low_complexity 1 37 0 572 168 11 0 chr10 37536979 37537074 -102779691 + AluJ/FLAM SINE Alu 2 97 -215 331 128 0 0 chr10 37537095 37537142 -102779623 + FLAM_A SINE Alu 81 127 -6 30 45 0 0 chr10 37537161 37537205 -102779560 + AT_rich Low_complexity Low_complexity 1 44 0 2052 134 14 0 chr10 37537365 37537657 -102779108 - AluSx SINE Alu -16 296 1 219 292 46 0 chr10 37538144 37538209 -102778556 + MIR SINE MIR 189 256 -6 185 261 102 57 chr10 37538403 37538491 -102778274 - L2 LINE L2 -14 3258 3167 21 0 0 0 chr10 37538703 37538724 -102778041 + AT_rich Low_complexity Low_complexity 1 21 0 504 372 49 42 chr10 37538769 37539196 -102777569 - L2 LINE L2 -36 3236 2807 404 297 48 21 chr10 37539211 37539356 -102777409 + MIR SINE MIR 2 150 -112 283 68 45 0 chr10 37539358 37539402 -102777363 - AluSg SINE Alu -7 295 250 209 225 0 0 chr10 37539449 37539489 -102777276 + MIR SINE MIR 219 258 -4 1679 315 150 38 chr10 37539502 37540855 -102775910 - L2 LINE L2 -529 2785 1585 1839 162 0 7 chr10 37540855 37541145 -102775620 - AluJb SINE Alu -24 288 1 1679 315 150 38 chr10 37541145 37541261 -102775504 - L2 LINE L2 -1729 1585 1483 1916 102 0 0 chr10 37541261 37541506 -102775259 - AluSg SINE Alu -65 245 1 1679 315 150 38 chr10 37541506 37542114 -102774651 - L2 LINE L2 -1831 1483 389 233 273 102 31 chr10 37542691 37542819 -102773946 - L2 LINE L2 -1047 2267 2131 2268 97 7 0 chr10 37543116 37543416 -102773349 + AluSx SINE Alu 1 302 -10 2038 118 16 7 chr10 37543733 37544039 -102772726 + AluSx SINE Alu 1 309 -3 436 301 98 35 chr10 37544085 37544258 -102772507 - MER5A DNA MER1_type -2 187 4 184 247 214 34 chr10 37544279 37544368 -102772397 + L2 LINE L2 3204 3308 -5 270 226 0 75 chr10 37544601 37544694 -102772071 - MER103 DNA DNA -58 108 23 2569 48 0 10 chr10 37545277 37545588 -102771177 - AluY SINE Alu -3 308 1 22 94 0 0 chr10 37545596 37545660 -102771105 + AT_rich Low_complexity Low_complexity 1 64 0 2049 119 71 0 chr10 37546208 37546545 -102770220 - MER46B DNA MER2_type 0 236 1 481 320 120 51 chr10 37547228 37547684 -102769081 - L2 LINE L2 0 3272 2786 450 0 0 0 chr10 37548125 37548175 -102768590 + (CA)n Simple_repeat Simple_repeat 2 51 0 501 158 115 22 chr10 37548181 37548320 -102768445 - L1ME4a LINE L1 -15 6106 5955 757 178 0 22 chr10 37548430 37548565 -102768200 - FLAM_C SINE Alu -1 132 1 1958 147 3 0 chr10 37548775 37549067 -102767698 + AluSx SINE Alu 1 293 -19 191 314 130 46 chr10 37549130 37549391 -102767374 - L2 LINE L2 -1344 1970 1688 1832 152 6 51 chr10 37549571 37549909 -102766856 - AluSx SINE Alu 0 312 1 418 224 96 96 chr10 37551112 37551188 -102765577 - L1MC5 LINE L1 -48 7913 7838 1551 140 41 92 chr10 37551188 37551502 -102765263 + AluJo SINE Alu 1 298 -14 418 224 96 96 chr10 37551502 37551675 -102765090 - L1MC5 LINE L1 -122 7839 7664 853 114 108 6 chr10 37553581 37553747 -102763018 + L1MB2 LINE L1 5985 6167 -4 267 31 0 0 chr10 37553839 37553871 -102762894 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2026 101 4 14 chr10 37553881 37554158 -102762607 - AluSc SINE Alu -35 274 1 2365 101 0 0 chr10 37554160 37554468 -102762297 - AluY SINE Alu -3 308 1 1826 193 0 10 chr10 37554473 37554779 -102761986 - AluJb SINE Alu -9 303 1 4968 155 26 48 chr10 37555150 37555578 -102761187 + L1 LINE L1 3668 4104 -2042 1944 136 0 16 chr10 37555578 37555886 -102760879 + AluJb SINE Alu 1 303 -9 4968 155 26 48 chr10 37555886 37556526 -102760239 + L1 LINE L1 4104 4713 -1433 219 103 0 0 chr10 37557028 37557067 -102759698 + (T)n Simple_repeat Simple_repeat 1 39 0 3267 154 33 15 chr10 37557510 37558178 -102758587 + L1 LINE L1 4696 5375 -771 354 212 0 0 chr10 37558181 37558247 -102758518 - Tigger3b DNA MER2_type 0 1232 1167 2118 128 37 3 chr10 37558283 37558636 -102758129 - Tigger3b DNA MER2_type -51 1180 816 1167 146 12 6 chr10 37558639 37558810 -102757955 - AluJo SINE Alu -21 291 120 2634 121 136 7 chr10 37558812 37559372 -102757393 - Tigger3b DNA MER2_type -404 827 196 1103 142 12 0 chr10 37559379 37559548 -102757217 - AluSg/x SINE Alu -25 287 117 849 126 16 60 chr10 37559555 37559737 -102757028 + AluSg/x SINE Alu 111 284 -26 16294 42 5 5 chr10 37559912 37561637 -102755128 - L1P2 LINE L1 -640 5514 3786 2259 94 0 10 chr10 37561637 37561936 -102754829 - AluY SINE Alu -15 296 1 16294 42 5 5 chr10 37561936 37562477 -102754288 - L1P2 LINE L1 -2368 3786 3247 2201 119 0 0 chr10 37562833 37563128 -102753637 - AluSx SINE Alu -2 310 16 5414 193 73 30 chr10 37563991 37565290 -102751475 + Charlie1a DNA MER1_type 2 1367 -1394 720 261 77 0 chr10 37565290 37565485 -102751280 - MER63A DNA MER1_type 0 210 1 5414 193 73 30 chr10 37565485 37565572 -102751193 + Charlie1a DNA MER1_type 1367 1449 -6 2309 89 3 0 chr10 37566836 37567129 -102749636 + AluY SINE Alu 1 294 -17 2519 67 0 6 chr10 37568067 37568379 -102748386 - AluY SINE Alu -1 310 1 672 202 0 16 chr10 37569140 37569269 -102747496 - AluJb SINE Alu -185 127 1 313 240 41 50 chr10 37569375 37569496 -102747269 + MIR SINE MIR 72 191 -71 212 259 86 43 chr10 37570374 37570513 -102746252 + L2 LINE L2 3127 3271 -1 227 271 62 54 chr10 37572861 37572990 -102743775 + MIR SINE MIR 68 197 -65 1818 161 10 16 chr10 37573253 37573557 -102743208 + AluJo SINE Alu 1 302 -10 23 0 0 0 chr10 37574068 37574091 -102742674 + AT_rich Low_complexity Low_complexity 1 23 0 2122 109 3 0 chr10 37575453 37575762 -102741003 + AluSq SINE Alu 1 310 0 639 162 0 127 chr10 37575777 37575919 -102740846 + FLAM_A SINE Alu 1 124 -9 297 0 0 0 chr10 37576694 37576727 -102740038 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2291 83 10 3 chr10 37576764 37577064 -102739701 - AluSp SINE Alu -11 302 1 256 125 45 11 chr10 37578262 37578350 -102738415 + (TA)n Simple_repeat Simple_repeat 1 91 0 304 186 48 0 chr10 37578375 37578542 -102738223 + (TA)n Simple_repeat Simple_repeat 2 176 0 53 30 0 0 chr10 37578542 37578609 -102738156 + AT_rich Low_complexity Low_complexity 1 67 0 483 29 80 51 chr10 37578609 37578784 -102737981 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 37578784 37578806 -102737959 + AT_rich Low_complexity Low_complexity 1 22 0 1148 143 14 32 chr10 37579041 37579257 -102737508 + AluSg/x SINE Alu 83 294 -16 4547 143 33 15 chr10 37579257 37580135 -102736630 + L1MA8 LINE L1 5393 6286 -5 1930 144 16 13 chr10 37580516 37580822 -102735943 + AluJb SINE Alu 6 312 0 1539 163 95 25 chr10 37580984 37581120 -102735645 + AluJo SINE Alu 1 126 -186 2308 96 6 10 chr10 37581120 37581432 -102735333 + AluSq SINE Alu 1 311 -2 1539 163 95 25 chr10 37581432 37581578 -102735187 + AluJo SINE Alu 126 303 -9 248 304 13 0 chr10 37581776 37581855 -102734910 + MIR SINE MIR 182 261 -1 2062 114 6 25 chr10 37582351 37582666 -102734099 + AluSx SINE Alu 1 309 -3 1912 131 111 3 chr10 37582670 37583030 -102733735 - MSTB LTR MaLR -27 399 1 25 0 0 0 chr10 37583287 37583312 -102733453 + AT_rich Low_complexity Low_complexity 1 25 0 2015 127 7 13 chr10 37583863 37584162 -102732603 + AluSx SINE Alu 1 297 -15 927 163 6 18 chr10 37584162 37584328 -102732437 + AluSq SINE Alu 134 297 -16 2150 113 3 0 chr10 37584442 37584724 -102732041 + AluSx SINE Alu 1 283 -29 1420 17 0 6 chr10 37585481 37585502 -102731263 - L1PA3 LINE L1 -251 5904 5884 14744 49 11 5 chr10 37585502 37587548 -102729217 - L1MB1 LINE L1 -306 5883 3777 2259 94 0 10 chr10 37587548 37587847 -102728918 - AluY SINE Alu -15 296 1 14744 49 11 5 chr10 37587847 37588192 -102728573 - L1MB1 LINE L1 -2412 3777 3436 2659 100 2 9 chr10 37588304 37588725 -102728040 - L1P4 LINE L1 -372 5791 5374 523 258 38 6 chr10 37588733 37588882 -102727883 + L2 LINE L2 1228 1384 -1930 2152 122 0 10 chr10 37588882 37589178 -102727587 - AluSx SINE Alu -18 294 2 2102 298 109 31 chr10 37589292 37589700 -102727065 - HERV16 LTR ERVL -1905 3091 2716 2373 108 13 35 chr10 37589700 37590072 -102726693 - THE1B LTR MaLR 0 364 1 2102 298 109 31 chr10 37590072 37590731 -102726034 - HERV16 LTR ERVL -2280 2716 2240 2311 113 0 7 chr10 37590731 37591040 -102725725 - AluSx SINE Alu -5 307 1 2102 298 109 31 chr10 37591040 37591156 -102725609 - HERV16 LTR ERVL -2756 2240 2134 2357 46 42 3 chr10 37591156 37591441 -102725324 + AluY SINE Alu 1 296 -15 597 269 134 54 chr10 37591448 37591843 -102724922 + L1MC/D LINE L1 5284 5744 -426 1689 131 24 40 chr10 37591843 37592140 -102724625 + AluSq SINE Alu 21 312 -1 597 269 134 54 chr10 37592140 37592243 -102724522 + L1MC/D LINE L1 5744 5837 -333 1961 143 7 0 chr10 37592353 37592646 -102724119 + AluJo SINE Alu 1 295 -17 441 244 79 107 chr10 37592651 37592942 -102723823 + MLT1J LTR MaLR 229 511 0 884 161 0 7 chr10 37593130 37593267 -102723498 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37593468 37593513 -102723252 + A-rich Low_complexity Low_complexity 2 47 0 346 309 34 77 chr10 37593965 37594198 -102722567 + L1M4 LINE L1 3695 3917 -2229 2220 94 3 7 chr10 37594399 37594713 -102722052 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37594733 37594797 -102721968 - U6 snRNA snRNA -43 64 1 1765 156 10 49 chr10 37595285 37595426 -102721339 + AluJo SINE Alu 1 146 -166 2107 95 35 0 chr10 37595426 37595709 -102721056 + AluSp SINE Alu 1 293 -20 1765 156 10 49 chr10 37595709 37595875 -102720890 + AluJo SINE Alu 146 296 -16 196 256 154 13 chr10 37596208 37596286 -102720479 + MER5A DNA MER1_type 74 162 -27 2316 138 62 7 chr10 37596294 37596700 -102720065 + MSTC LTR MaLR 1 428 0 2354 89 0 7 chr10 37596813 37597117 -102719648 + AluSx SINE Alu 1 302 -10 709 232 12 24 chr10 37597124 37597292 -102719473 + FRAM SINE Alu 1 162 -14 2301 60 0 3 chr10 37597292 37597612 -102719153 + AluY SINE Alu 1 319 0 7289 163 31 75 chr10 37597614 37598214 -102718551 - LTR49-int LTR ERV1 -1915 4416 3791 1965 151 0 0 chr10 37598214 37598506 -102718259 - AluSx SINE Alu -10 302 11 7289 163 31 75 chr10 37598506 37599138 -102717627 - LTR49-int LTR ERV1 -2540 3791 3133 1536 199 0 7 chr10 37599138 37599420 -102717345 + AluJb SINE Alu 29 308 -4 7289 163 31 75 chr10 37599420 37599705 -102717060 - LTR49-int LTR ERV1 -3198 3133 2978 2503 77 3 0 chr10 37599705 37600016 -102716749 + AluSp SINE Alu 1 312 -1 7289 163 31 75 chr10 37600016 37600186 -102716579 - LTR49-int LTR ERV1 -3353 2978 2802 375 181 69 0 chr10 37600204 37600276 -102716489 - LTR49-int LTR ERV1 -4739 1592 1516 369 274 0 0 chr10 37600280 37600353 -102716412 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1966 152 17 51 chr10 37600353 37600645 -102716120 - LTR49-int LTR ERV1 -3271 1609 1309 2168 107 3 10 chr10 37600645 37600945 -102715820 + AluSx SINE Alu 1 298 -14 1966 152 17 51 chr10 37600945 37601339 -102715426 - LTR49-int LTR ERV1 -3571 1309 575 1211 140 0 0 chr10 37601340 37601518 -102715247 + AluSg/x SINE Alu 133 310 -2 1834 168 54 21 chr10 37601519 37601907 -102714858 - LTR49-int LTR ERV1 -4629 1317 15 3158 139 49 37 chr10 37601923 37602081 -102714684 - LTR49 LTR ERV1 0 595 440 2169 102 17 3 chr10 37602081 37602375 -102714390 - AluSx SINE Alu -12 300 3 3158 139 49 37 chr10 37602375 37602386 -102714379 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37602386 37602680 -102714085 - AluY SINE Alu -20 291 1 3158 139 49 37 chr10 37602680 37603097 -102713668 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37603343 37603439 -102713326 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37603443 37603472 -102713293 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37603668 37603864 -102712901 - AluSg/x SINE Alu -4 306 110 2233 77 0 21 chr10 37603886 37604192 -102712573 + AluSc SINE Alu 1 300 0 2255 112 3 10 chr10 37604254 37604568 -102712197 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37604581 37604847 -102711918 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37604994 37605068 -102711697 - AluSx SINE Alu -1 311 236 1510 97 0 5 chr10 37605068 37605263 -102711502 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37605438 37605593 -102711172 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37605593 37605915 -102710850 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37605915 37606048 -102710717 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37606357 37606481 -102710284 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37606481 37606778 -102709987 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37606778 37606956 -102709809 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37606995 37607159 -102709606 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37607350 37607470 -102709295 + L2 LINE L2 3190 3313 0 2792 174 56 33 chr10 37607499 37607564 -102709201 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37607564 37607868 -102708897 - AluSx SINE Alu -4 308 1 2792 174 56 33 chr10 37607868 37608441 -102708324 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37608789 37609096 -102707669 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37609237 37609627 -102707138 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37609736 37610048 -102706717 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37610718 37611017 -102705748 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37611017 37611366 -102705399 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37611768 37612086 -102704679 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37612109 37612263 -102704502 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37612354 37612648 -102704117 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37613178 37613319 -102703446 + AluSx SINE Alu 5 150 -162 2517 73 0 0 chr10 37613319 37613622 -102703143 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37613622 37613792 -102702973 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37613840 37614022 -102702743 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37614366 37614443 -102702322 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37614522 37614645 -102702120 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37614996 37615295 -102701470 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37615369 37615458 -102701307 - Cheshire DNA MER1_type -16 2404 2315 * 7276 181 41 31 chr10 37615457 37615690 -102701075 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37615690 37615999 -102700766 + AluY SINE Alu 1 308 -3 7276 181 41 31 chr10 37615999 37616666 -102700099 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37616666 37616981 -102699784 - AluJo SINE Alu -22 290 4 7276 181 41 31 chr10 37616981 37617281 -102699484 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37617281 37617583 -102699182 - AluY SINE Alu -11 300 1 7276 181 41 31 chr10 37617583 37617955 -102698810 - Cheshire DNA MER1_type -1526 894 487 1942 148 19 13 chr10 37617957 37618267 -102698498 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37618277 37618724 -102698041 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37618724 37619000 -102697765 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37619000 37619015 -102697750 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37619015 37619301 -102697464 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37619301 37619860 -102696905 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37619860 37620169 -102696596 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37620169 37620716 -102696049 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37620716 37620848 -102695917 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37620848 37621492 -102695273 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37621492 37621584 -102695181 + AluSg/x SINE Alu 208 299 -13 3580 177 50 33 chr10 37621588 37622069 -102694696 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37622069 37622361 -102694404 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37622361 37622612 -102694153 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37622692 37622895 -102693870 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37622902 37623218 -102693547 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37623949 37624037 -102692728 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37624256 37624544 -102692221 + AluJb SINE Alu 12 310 0 1408 169 0 66 chr10 37624551 37624646 -102692119 + AluJo SINE Alu 37 137 -175 2169 114 13 7 chr10 37624646 37624944 -102691821 - AluSx SINE Alu -12 300 1 1408 169 0 66 chr10 37624944 37625120 -102691645 + AluJo SINE Alu 137 290 -22 2216 128 0 0 chr10 37625146 37625452 -102691313 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37625454 37625690 -102691075 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37625730 37626074 -102690691 - AluSx SINE Alu 0 341 1 226 281 16 0 chr10 37626334 37626349 -102690416 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37626349 37626488 -102690277 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37626488 37626798 -102689967 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37626798 37626984 -102689781 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37626984 37627032 -102689733 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37627091 37627649 -102689116 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37627650 37627761 -102689004 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37627761 37628061 -102688704 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37628061 37628342 -102688423 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37628342 37628520 -102688245 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37629482 37629813 -102686952 - AluSx SINE Alu -3 309 1 2032 105 72 4 chr10 37630236 37630513 -102686252 + AluSx SINE Alu 4 299 -13 22 0 0 0 chr10 37630965 37630987 -102685778 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37631761 37631882 -102684883 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37632679 37632702 -102684063 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37632772 37633068 -102683697 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37633207 37633327 -102683438 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37633588 37633721 -102683044 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37633764 37633787 -102682978 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37633788 37634069 -102682696 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37634069 37634227 -102682538 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37634228 37634393 -102682372 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37635126 37635296 -102681469 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37635429 37635502 -102681263 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37635557 37635723 -102681042 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37635939 37636297 -102680468 + L1M4 LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37636297 37636667 -102680098 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37636667 37637258 -102679507 + L1M4 LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37637258 37637703 -102679062 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37637987 37638292 -102678473 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37638307 37638547 -102678218 + L1M4 LINE L1 5024 5279 -867 2133 118 3 20 chr10 37638551 37638855 -102677910 - AluSx SINE Alu -13 299 1 538 125 48 0 chr10 37639321 37639494 -102677271 + (TA)n Simple_repeat Simple_repeat 1 181 0 2087 118 21 0 chr10 37639510 37639797 -102676968 - AluSq SINE Alu -20 293 1 222 37 0 0 chr10 37639898 37639925 -102676840 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 882 120 0 0 chr10 37639925 37640042 -102676723 - AluJb SINE Alu -195 117 1 2213 83 6 51 chr10 37640897 37641211 -102675554 - AluSx SINE Alu -12 300 1 2075 110 3 3 chr10 37641742 37642033 -102674732 - AluSx SINE Alu -1 311 21 351 282 50 28 chr10 37642426 37642607 -102674158 - L1M4 LINE L1 -1029 5117 4933 198 103 0 0 chr10 37642855 37642884 -102673881 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2265 86 10 3 chr10 37642907 37643199 -102673566 - AluY SINE Alu -17 294 1 198 0 0 0 chr10 37643324 37643346 -102673419 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 475 256 88 59 chr10 37643389 37643764 -102673001 - L1M4 LINE L1 -1698 4448 4063 1939 158 0 0 chr10 37644572 37644884 -102671881 - AluSx SINE Alu 0 314 3 894 181 0 12 chr10 37644886 37645046 -102671719 - MLT1A1 LTR MaLR -207 158 1 228 382 221 15 chr10 37645276 37645475 -102671290 + L2 LINE L2 3032 3271 -1 182 103 103 0 chr10 37645623 37645652 -102671113 - MIR SINE MIR -7 255 224 2408 82 10 3 chr10 37646059 37646362 -102670403 + AluSx SINE Alu 5 309 -3 451 179 13 0 chr10 37646654 37646732 -102670033 - MER116 DNA Mariner 0 80 2 243 0 0 0 chr10 37647139 37647166 -102669599 + (TTA)n Simple_repeat Simple_repeat 2 28 0 202 222 0 28 chr10 37647678 37647750 -102669015 + CT-rich Low_complexity Low_complexity 4 73 0 2055 41 49 0 chr10 37649103 37649349 -102667416 - AluY SINE Alu -8 303 46 459 0 0 0 chr10 37649654 37649705 -102667060 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2365 35 3 21 chr10 37649707 37649994 -102666771 - AluY SINE Alu -29 282 1 519 264 108 22 chr10 37650141 37650372 -102666393 + MER112 DNA MER1_type 2 252 -4 2414 78 0 0 chr10 37650480 37650775 -102665990 + AluSg SINE Alu 1 295 -15 2326 94 3 0 chr10 37651105 37651404 -102665361 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 37651636 37651672 -102665093 + AT_rich Low_complexity Low_complexity 1 36 0 214 250 83 0 chr10 37651900 37651960 -102664805 - MIR SINE MIR -147 115 51 2395 90 7 0 chr10 37652125 37652426 -102664339 - AluSq SINE Alu -10 303 1 568 162 86 0 chr10 37652583 37652700 -102664065 + L1MA9 LINE L1 6184 6310 -2 701 223 223 9 chr10 37653574 37653785 -102662980 - MIR SINE MIR -6 256 1 249 263 53 53 chr10 37654177 37654272 -102662493 - L2 LINE L2 -5 3267 3173 876 164 0 0 chr10 37654663 37654791 -102661974 - FLAM_C SINE Alu -4 129 2 441 282 201 10 chr10 37655048 37655257 -102661508 - MARNA DNA Mariner -52 534 286 1867 172 30 0 chr10 37655279 37655582 -102661183 - AluJb SINE Alu 0 312 1 2130 129 0 0 chr10 37655648 37655951 -102660814 + AluSg SINE Alu 1 303 -7 186 71 0 0 chr10 37655952 37655980 -102660785 + (T)n Simple_repeat Simple_repeat 1 28 0 2182 117 7 0 chr10 37656556 37656854 -102659911 + AluSc SINE Alu 1 300 -9 1089 226 124 40 chr10 37657855 37657913 -102658852 - MER63B DNA MER1_type -626 436 384 2079 124 3 3 chr10 37657913 37658204 -102658561 + AluSx SINE Alu 1 291 -21 2603 41 0 0 chr10 37658204 37658497 -102658268 + AluY SINE Alu 1 294 -17 1089 226 124 40 chr10 37658497 37658839 -102657926 - MER63B DNA MER1_type -677 385 1 2345 71 0 7 chr10 37659349 37659645 -102657120 + AluY SINE Alu 3 296 -15 242 104 0 21 chr10 37659672 37659720 -102657045 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2196 103 7 3 chr10 37659730 37660020 -102656745 + AluSc SINE Alu 1 291 -18 33 56 0 0 chr10 37660610 37660664 -102656101 + AT_rich Low_complexity Low_complexity 1 54 0 371 293 98 56 chr10 37660814 37661080 -102655685 - MLT1J LTR MaLR -140 371 95 573 265 70 28 chr10 37661145 37661360 -102655405 - MIR SINE MIR -24 238 15 2253 131 0 0 chr10 37665500 37665805 -102650960 - AluSx SINE Alu -7 305 1 440 230 52 37 chr10 37666395 37666530 -102650235 - MLT1L LTR MaLR -50 565 429 761 105 0 0 chr10 37666615 37666720 -102650045 - AluY SINE Alu -2 309 205 1988 101 4 0 chr10 37667850 37668108 -102648657 - AluSx SINE Alu -53 259 1 960 176 0 75 chr10 37668229 37668416 -102648349 + AluJo SINE Alu 1 173 -139 507 228 132 53 chr10 37668699 37668888 -102647877 - MIR SINE MIR 0 262 59 240 315 111 74 chr10 37669181 37669227 -102647538 - MIR3 SINE MIR -3 205 162 1997 147 0 16 chr10 37669227 37669540 -102647225 - AluJb SINE Alu -4 308 1 240 315 111 74 chr10 37669540 37669655 -102647110 - MIR3 SINE MIR -46 162 38 2412 109 0 0 chr10 37670073 37670385 -102646380 - AluSx SINE Alu 0 312 1 233 190 224 0 chr10 37670501 37670559 -102646206 - MER5A DNA MER1_type -68 121 51 983 150 0 18 chr10 37670566 37670733 -102646032 - AluJb SINE Alu -13 299 136 2078 104 72 0 chr10 37671350 37671629 -102645136 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr10 37672081 37672103 -102644662 + AT_rich Low_complexity Low_complexity 1 22 0 330 240 8 83 chr10 37672877 37672998 -102643767 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37673795 37673818 -102642947 + AT_rich Low_complexity Low_complexity 1 23 0 1968 152 0 3 chr10 37673888 37674184 -102642581 + AluSx SINE Alu 1 295 -17 822 117 0 8 chr10 37674323 37674443 -102642322 - L1PB3 LINE L1 -1 6153 6035 602 196 0 15 chr10 37674704 37674837 -102641928 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37674880 37674903 -102641862 + AT_rich Low_complexity Low_complexity 1 23 0 1712 174 43 0 chr10 37674904 37675185 -102641580 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37675185 37675343 -102641422 + MLT1E LTR MaLR 429 592 -1 488 327 6 0 chr10 37675344 37675509 -102641256 + ERVL LTR ERVL 4214 4379 -1385 1159 147 0 0 chr10 37676242 37676412 -102640353 + FRAM SINE Alu 1 170 -6 300 219 27 14 chr10 37676545 37676618 -102640147 + LTR16A LTR ERVL 56 129 -321 306 289 139 12 chr10 37676673 37676839 -102639926 + LTR16A LTR ERVL 246 432 -18 956 265 183 41 chr10 37677055 37677413 -102639352 + L1MC/D LINE L1 3589 3895 -2251 2307 111 46 32 chr10 37677413 37677783 -102638982 + THE1C LTR MaLR 1 375 0 956 265 183 41 chr10 37677783 37678374 -102638391 + L1MC/D LINE L1 3895 4673 -1473 1464 184 44 23 chr10 37678374 37678819 -102637946 + MLT1D LTR MaLR 1 505 0 2092 141 10 0 chr10 37679103 37679408 -102637357 + AluSx SINE Alu 1 308 -4 270 275 88 21 chr10 37679423 37679663 -102637102 + L1MC/D LINE L1 5024 5279 -867 2115 118 3 20 chr10 37679667 37679971 -102636794 - AluSx SINE Alu -13 299 1 2359 46 42 0 chr10 37679990 37680274 -102636491 + AluY SINE Alu 1 296 -15 625 270 134 54 chr10 37680281 37680676 -102636089 + L1MC/D LINE L1 5284 5744 -426 1683 131 24 40 chr10 37680676 37680973 -102635792 + AluSq SINE Alu 21 312 -1 625 270 134 54 chr10 37680973 37681076 -102635689 + L1MC/D LINE L1 5744 5837 -333 1942 143 7 0 chr10 37681186 37681479 -102635286 + AluJo SINE Alu 1 295 -17 440 244 79 107 chr10 37681484 37681775 -102634990 + MLT1J LTR MaLR 229 511 0 881 161 0 7 chr10 37681963 37682100 -102634665 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37682302 37682347 -102634418 + A-rich Low_complexity Low_complexity 2 47 0 374 295 37 83 chr10 37682748 37683032 -102633733 + L1M4 LINE L1 3649 3917 -2229 2195 94 3 7 chr10 37683233 37683547 -102633218 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37683567 37683631 -102633134 - U6 snRNA snRNA -43 64 1 1753 156 10 49 chr10 37684119 37684260 -102632505 + AluJo SINE Alu 1 146 -166 2086 95 35 0 chr10 37684260 37684543 -102632222 + AluSp SINE Alu 1 293 -20 1753 156 10 49 chr10 37684543 37684709 -102632056 + AluJo SINE Alu 146 296 -16 222 268 146 12 chr10 37685041 37685123 -102631642 + MER5A DNA MER1_type 74 166 -23 2436 138 62 7 chr10 37685127 37685533 -102631232 + MSTC LTR MaLR 1 428 0 2331 89 0 7 chr10 37685645 37685949 -102630816 + AluSx SINE Alu 1 302 -10 768 226 12 24 chr10 37685960 37686124 -102630641 + FRAM SINE Alu 1 162 -14 2272 60 0 3 chr10 37686124 37686444 -102630321 + AluY SINE Alu 1 319 0 7391 163 31 75 chr10 37686446 37687046 -102629719 - LTR49-int LTR ERV1 -1915 4416 3791 1951 151 0 0 chr10 37687046 37687338 -102629427 - AluSx SINE Alu -10 302 11 7391 163 31 75 chr10 37687338 37687970 -102628795 - LTR49-int LTR ERV1 -2540 3791 3133 1521 199 0 7 chr10 37687970 37688252 -102628513 + AluJb SINE Alu 29 308 -4 7391 163 31 75 chr10 37688252 37688537 -102628228 - LTR49-int LTR ERV1 -3198 3133 2978 2484 77 3 0 chr10 37688537 37688848 -102627917 + AluSp SINE Alu 1 312 -1 7391 163 31 75 chr10 37688848 37689018 -102627747 - LTR49-int LTR ERV1 -3353 2978 2802 381 181 69 0 chr10 37689036 37689108 -102627657 - LTR49-int LTR ERV1 -4739 1592 1516 367 274 0 0 chr10 37689112 37689185 -102627580 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1980 152 17 51 chr10 37689185 37689477 -102627288 - LTR49-int LTR ERV1 -3271 1609 1309 2184 107 3 7 chr10 37689477 37689776 -102626989 + AluSx SINE Alu 1 298 -14 1980 152 17 51 chr10 37689776 37690170 -102626595 - LTR49-int LTR ERV1 -3571 1309 575 1197 140 0 0 chr10 37690171 37690349 -102626416 + AluSg/x SINE Alu 133 310 -2 1837 168 54 21 chr10 37690350 37690738 -102626027 - LTR49-int LTR ERV1 -4629 1317 15 3164 139 49 37 chr10 37690754 37690912 -102625853 - LTR49 LTR ERV1 0 595 440 2043 102 17 3 chr10 37690912 37691206 -102625559 - AluSx SINE Alu -12 300 3 3164 139 49 37 chr10 37691206 37691217 -102625548 - LTR49 LTR ERV1 -155 440 431 2359 58 0 10 chr10 37691217 37691511 -102625254 - AluY SINE Alu -20 291 1 3164 139 49 37 chr10 37691511 37691928 -102624837 - LTR49 LTR ERV1 -164 431 1 449 188 21 0 chr10 37692174 37692270 -102624495 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37692274 37692303 -102624462 + AT_rich Low_complexity Low_complexity 1 29 0 1369 82 10 5 chr10 37692499 37692695 -102624070 - AluSg/x SINE Alu -4 306 110 2105 77 0 21 chr10 37692717 37693023 -102623742 + AluSc SINE Alu 1 300 0 2220 115 0 0 chr10 37693085 37693397 -102623368 + AluSx SINE Alu 1 312 0 1396 147 98 11 chr10 37693410 37693676 -102623089 + AluJo SINE Alu 1 289 -23 1694 90 169 4 chr10 37693837 37694092 -102622673 - AluSx SINE Alu -5 297 1 884 197 93 73 chr10 37694267 37694422 -102622343 - AluJo SINE Alu -7 295 130 1527 186 0 47 chr10 37694422 37694744 -102622021 - AluJo SINE Alu -5 307 1 884 197 93 73 chr10 37694744 37694877 -102621888 - AluJo SINE Alu -172 130 1 1905 122 36 10 chr10 37695186 37695310 -102621455 + AluSx SINE Alu 1 120 -192 2306 71 0 7 chr10 37695310 37695607 -102621158 + AluY SINE Alu 1 295 -16 1905 122 36 10 chr10 37695607 37695785 -102620980 + AluSx SINE Alu 120 311 -1 912 189 0 0 chr10 37695824 37695988 -102620777 - FRAM SINE Alu -12 164 1 459 296 35 14 chr10 37696157 37696299 -102620466 + L2 LINE L2 3169 3313 0 2792 173 60 33 chr10 37696328 37696390 -102620375 - L1MB2 LINE L1 -4 6167 6108 1793 173 13 0 chr10 37696390 37696697 -102620068 - AluSx SINE Alu -1 311 1 2792 173 60 33 chr10 37696697 37697271 -102619494 - L1MB2 LINE L1 -63 6108 5514 2097 101 0 16 chr10 37697619 37697926 -102618839 + AluSg SINE Alu 1 302 -8 2280 141 95 0 chr10 37698067 37698457 -102618308 - MSTA LTR MaLR -1 427 1 2239 112 0 0 chr10 37698566 37698878 -102617887 + AluSx SINE Alu 1 312 0 1843 144 30 3 chr10 37699548 37699847 -102616918 + AluJo SINE Alu 1 307 -5 2396 61 0 0 chr10 37699847 37700196 -102616569 + AluY SINE Alu 17 365 0 2126 110 0 16 chr10 37700598 37700916 -102615849 + AluSq SINE Alu 1 313 0 827 217 0 12 chr10 37700927 37701093 -102615672 + AluJb SINE Alu 137 300 -12 1452 180 51 31 chr10 37701184 37701478 -102615287 - AluSx SINE Alu -2 300 1 1924 128 0 42 chr10 37702008 37702149 -102614616 + AluSx SINE Alu 5 150 -162 2395 73 0 0 chr10 37702149 37702452 -102614313 + AluY SINE Alu 1 303 -8 1924 128 0 42 chr10 37702452 37702622 -102614143 + AluSx SINE Alu 150 303 -9 578 319 28 22 chr10 37702670 37702852 -102613913 + MER5A DNA MER1_type 7 189 0 569 78 13 0 chr10 37703196 37703273 -102613492 - U6 snRNA snRNA -1 106 29 686 211 0 0 chr10 37703352 37703475 -102613290 + FLAM_C SINE Alu 2 124 -19 1766 181 0 0 chr10 37703826 37704125 -102612640 - AluJb SINE Alu -13 299 1 448 157 22 11 chr10 37704199 37704288 -102612477 - Cheshire DNA MER1_type -16 2404 2315 * 7202 182 41 31 chr10 37704287 37704520 -102612245 - Cheshire DNA MER1_type -343 2077 1848 2455 55 0 3 chr10 37704520 37704829 -102611936 + AluY SINE Alu 1 308 -3 7202 182 41 31 chr10 37704829 37705496 -102611269 - Cheshire DNA MER1_type -572 1848 1189 1320 175 3 92 chr10 37705496 37705811 -102610954 - AluJo SINE Alu -22 290 4 7202 182 41 31 chr10 37705811 37706111 -102610654 - Cheshire DNA MER1_type -1231 1189 894 2384 60 0 7 chr10 37706111 37706413 -102610352 - AluY SINE Alu -11 300 1 7202 182 41 31 chr10 37706413 37706785 -102609980 - Cheshire DNA MER1_type -1526 894 487 1935 132 19 13 chr10 37706787 37707097 -102609668 + AluJb SINE Alu 1 312 0 7078 155 33 90 chr10 37707107 37707554 -102609211 - L1M4 LINE L1 -3267 3115 2644 1720 127 91 7 chr10 37707554 37707830 -102608935 - AluSx SINE Alu -9 303 5 7078 155 33 90 chr10 37707830 37707845 -102608920 - L1M4 LINE L1 -3738 2644 2630 1737 171 0 0 chr10 37707845 37708131 -102608634 - AluJb SINE Alu -26 286 1 7078 155 33 90 chr10 37708131 37708690 -102608075 - L1M4 LINE L1 -3752 2630 2041 2192 94 7 7 chr10 37708690 37708999 -102607766 + AluSg1 SINE Alu 1 309 0 7078 155 33 90 chr10 37708999 37709546 -102607219 - L1M4 LINE L1 -4341 2041 1711 752 220 0 0 chr10 37709546 37709678 -102607087 - FLAM_A SINE Alu -1 132 1 7078 155 33 90 chr10 37709678 37710322 -102606443 - L1M4 LINE L1 -4671 1711 1032 663 109 0 0 chr10 37710322 37710414 -102606351 + AluSg/x SINE Alu 205 296 -13 3597 177 50 33 chr10 37710418 37710899 -102605866 - L1M4 LINE L1 -5620 764 264 1991 96 20 3 chr10 37710899 37711191 -102605574 + AluSg SINE Alu 5 301 -9 3597 177 50 33 chr10 37711191 37711442 -102605323 - L1M4 LINE L1 -6120 264 19 1024 192 123 0 chr10 37711522 37711725 -102605040 - AluJo SINE Alu -84 228 1 2110 110 0 28 chr10 37711729 37712048 -102604717 - AluSx SINE Alu -2 310 1 248 386 0 11 chr10 37712779 37712867 -102603898 + MER5B DNA MER1_type 6 92 -86 1236 221 42 0 chr10 37713086 37713374 -102603391 + AluJb SINE Alu 12 310 0 1313 170 0 63 chr10 37713381 37713476 -102603289 + AluJo SINE Alu 37 136 -176 2065 111 13 7 chr10 37713476 37713774 -102602991 - AluSx SINE Alu -12 300 1 1313 170 0 63 chr10 37713774 37713949 -102602816 + AluJo SINE Alu 136 290 -22 2087 128 0 0 chr10 37713975 37714281 -102602484 + AluSq SINE Alu 1 306 -7 1481 136 21 0 chr10 37714283 37714519 -102602246 + AluSg/x SINE Alu 65 305 -5 1751 158 0 11 chr10 37714559 37714898 -102601867 - AluSx SINE Alu 0 336 1 1750 131 0 50 chr10 37715178 37715311 -102601454 + AluJo SINE Alu 7 145 -167 2422 68 0 3 chr10 37715311 37715621 -102601144 + AluY SINE Alu 1 309 -2 1750 131 0 50 chr10 37715621 37715807 -102600958 + AluJo SINE Alu 145 312 0 206 292 0 0 chr10 37715808 37715856 -102600909 + GA-rich Low_complexity Low_complexity 1 48 0 4032 84 25 4 chr10 37715914 37716472 -102600293 - L1PA11 LINE L1 -4 6170 5601 949 18 0 0 chr10 37716473 37716584 -102600181 - L1PA4 LINE L1 0 6155 6045 2386 84 27 62 chr10 37716584 37716884 -102599881 - L1PA11 LINE L1 -551 5623 5335 1627 117 101 0 chr10 37716884 37717165 -102599600 - AluSx SINE Alu 0 307 1 2386 84 27 62 chr10 37717165 37717343 -102599422 - L1PA11 LINE L1 -839 5335 5152 2082 103 0 67 chr10 37718305 37718636 -102598129 - AluSx SINE Alu -3 309 1 2142 97 7 3 chr10 37719039 37719337 -102597428 + AluSq SINE Alu 2 300 -13 838 188 12 24 chr10 37719400 37719565 -102597200 + FRAM SINE Alu 3 165 -1 356 106 0 141 chr10 37720127 37720153 -102596612 - LTR43 LTR ERV1 0 602 574 1524 137 129 14 chr10 37720153 37720431 -102596334 - AluSx SINE Alu -2 310 1 356 106 0 141 chr10 37720431 37720469 -102596296 - LTR43 LTR ERV1 -28 574 550 751 171 0 0 chr10 37720469 37720586 -102596179 + FLAM_C SINE Alu 2 118 -15 356 106 0 141 chr10 37720586 37720605 -102596160 - LTR43 LTR ERV1 -52 550 530 2628 256 48 28 chr10 37720605 37721531 -102595234 - MLT-int LTR MaLR -354 1381 385 1857 136 44 3 chr10 37721546 37721841 -102594924 - AluSx SINE Alu -5 307 1 2107 91 0 3 chr10 37721854 37722140 -102594625 - AluSg SINE Alu -1 309 25 1588 187 18 0 chr10 37722148 37722431 -102594334 - MLT-int LTR MaLR -1320 415 128 556 231 13 51 chr10 37722461 37722617 -102594148 - MLT1A1 LTR MaLR -215 150 1 24 32 0 0 chr10 37722760 37722791 -102593974 + AT_rich Low_complexity Low_complexity 1 31 0 2469 71 0 0 chr10 37722951 37723261 -102593504 - AluY SINE Alu -1 310 1 2907 184 25 2 chr10 37723295 37723817 -102592948 + L1MCa LINE L1 28 561 -5865 633 293 111 28 chr10 37723875 37724199 -102592566 + L2 LINE L2 855 1205 -2109 2095 89 25 0 chr10 37724242 37724523 -102592242 - AluSx SINE Alu -24 288 1 5324 95 41 1 chr10 37724527 37725287 -102591478 - L1PA13 LINE L1 0 6163 5374 539 250 40 0 chr10 37725295 37725443 -102591322 + L2 LINE L2 1228 1381 -1933 2033 122 0 10 chr10 37725444 37725740 -102591025 - AluSx SINE Alu -18 294 2 2994 286 120 38 chr10 37725879 37726262 -102590503 - HERV16 LTR ERVL -1905 3091 2741 2377 108 13 35 chr10 37726262 37726634 -102590131 - THE1B LTR MaLR 0 364 1 2994 286 120 38 chr10 37726634 37727293 -102589472 - HERV16 LTR ERVL -2255 2741 2137 2178 113 0 7 chr10 37727293 37727602 -102589163 - AluSx SINE Alu -5 307 1 2994 286 120 38 chr10 37727602 37727718 -102589047 - HERV16 LTR ERVL -2859 2137 2032 2374 65 0 0 chr10 37727718 37728011 -102588754 + AluY SINE Alu 1 293 -18 2994 286 120 38 chr10 37728011 37728414 -102588351 - HERV16 LTR ERVL -2964 2032 1687 521 325 65 68 chr10 37728411 37728614 -102588151 - HERV16 LTR ERVL -3428 1568 1366 * 1912 156 0 0 chr10 37728614 37728921 -102587844 - AluJo SINE Alu -4 308 2 521 325 65 68 chr10 37728921 37729132 -102587633 - HERV16 LTR ERVL -3630 1366 1155 1323 288 69 46 chr10 37729142 37729796 -102586969 - HERV16 LTR ERVL -3956 1040 372 374 304 52 16 chr10 37730796 37731102 -102585663 - LTR16A LTR ERVL -72 385 18 273 289 77 10 chr10 37731123 37731227 -102585538 + L2 LINE L2 1597 1707 -1607 372 263 35 88 chr10 37731287 37731347 -102585418 - MER76 LTR ERV -43 645 583 2102 129 7 0 chr10 37731347 37731650 -102585115 - AluSx SINE Alu -7 305 1 372 263 35 88 chr10 37731650 37731760 -102585005 - MER76 LTR ERV -105 583 484 1632 199 80 3 chr10 37731789 37732116 -102584649 - MER76 LTR ERV -334 354 3 614 289 28 0 chr10 37732118 37732298 -102584467 + L2 LINE L2 1729 1913 -1401 1285 138 0 0 chr10 37732364 37732553 -102584212 + AluSg/x SINE Alu 82 270 -40 1100 123 0 6 chr10 37732567 37732746 -102584019 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2676 183 47 39 chr10 37732746 37733516 -102583249 + L1MB8 LINE L1 4893 5655 -529 257 0 30 0 chr10 37733516 37733549 -102583216 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1905 111 0 21 chr10 37733551 37733839 -102582926 - AluSg SINE Alu -28 282 1 2676 183 47 39 chr10 37733839 37734148 -102582617 + L1MB8 LINE L1 5655 6175 -9 581 273 75 0 chr10 37734158 37734345 -102582420 + L2 LINE L2 1902 2102 -1212 1749 151 3 29 chr10 37734351 37734663 -102582102 - AluJo SINE Alu -8 304 1 2120 102 20 3 chr10 37734682 37734987 -102581778 + AluSg SINE Alu 1 310 0 2059 104 0 10 chr10 37735640 37735939 -102580826 - AluY SINE Alu -15 296 1 2007 126 7 0 chr10 37736038 37736348 -102580417 + AluSx SINE Alu 1 312 0 233 302 0 0 chr10 37736354 37736417 -102580348 - L1ME3 LINE L1 -4 6158 6096 212 348 76 0 chr10 37736417 37736509 -102580256 + L2 LINE L2 2088 2186 -1128 356 235 35 35 chr10 37736516 37736631 -102580134 - L1ME1 LINE L1 -65 6101 5987 1930 228 56 17 chr10 37736649 37737241 -102579524 - L1MDa LINE L1 -2780 3760 3146 1731 130 0 63 chr10 37737245 37737561 -102579204 - AluSx SINE Alu -5 307 12 662 190 38 143 chr10 37737562 37737677 -102579088 - L1MDa LINE L1 -3861 2679 2554 1227 141 82 107 chr10 37737677 37737968 -102578797 - AluJo SINE Alu -28 284 1 662 190 38 143 chr10 37737968 37738045 -102578720 - L1MDa LINE L1 -3986 2554 2471 2139 116 3 0 chr10 37738045 37738348 -102578417 - AluSp SINE Alu -9 304 1 662 190 38 143 chr10 37738348 37738596 -102578169 - L1MDa LINE L1 -4069 2471 2287 2037 109 10 0 chr10 37738599 37738892 -102577873 - AluSx SINE Alu -16 296 1 1875 144 0 7 chr10 37738892 37739184 -102577581 - AluSx SINE Alu -10 302 13 25 0 0 0 chr10 37739504 37739529 -102577236 + AT_rich Low_complexity Low_complexity 1 25 0 2517 224 93 81 chr10 37739582 37740052 -102576713 - L1ME1 LINE L1 -17 6149 5686 767 104 0 0 chr10 37740052 37740158 -102576607 - AluSq/x SINE Alu -172 140 35 2517 224 93 81 chr10 37740158 37741803 -102574962 - L1ME1 LINE L1 -480 5686 3959 2128 128 0 16 chr10 37741828 37742134 -102574631 + AluSx SINE Alu 1 301 -11 1997 122 0 7 chr10 37742180 37742459 -102574306 + AluSg SINE Alu 1 277 -33 378 0 0 0 chr10 37742459 37742501 -102574264 + (CA)n Simple_repeat Simple_repeat 1 42 0 1162 140 6 0 chr10 37742501 37742665 -102574100 + AluSg/x SINE Alu 131 295 -17 299 179 113 0 chr10 37742665 37742771 -102573994 - L1ME1 LINE L1 -2197 3949 3832 581 165 50 0 chr10 37742781 37742902 -102573863 - L1MB7 LINE L1 0 6253 6127 842 150 0 8 chr10 37742917 37743044 -102573721 + FLAM_C SINE Alu 2 127 -16 214 182 0 0 chr10 37743046 37743090 -102573675 + A-rich Low_complexity Low_complexity 5 48 0 7701 208 40 24 chr10 37743095 37743247 -102573518 - L1MB7 LINE L1 -134 6119 5971 2131 123 10 3 chr10 37743247 37743540 -102573225 - AluSq SINE Alu -18 295 1 7701 208 40 24 chr10 37743540 37743765 -102573000 - L1MB7 LINE L1 -282 5971 5751 2307 88 3 20 chr10 37743765 37744071 -102572694 - AluSg SINE Alu -9 301 1 7701 208 40 24 chr10 37744071 37744582 -102572183 - L1MB7 LINE L1 -502 5751 5250 2180 101 9 19 chr10 37744582 37744898 -102571867 - AluSq SINE Alu 0 313 1 7701 208 40 24 chr10 37744898 37745012 -102571753 - L1MB7 LINE L1 -1003 5250 5139 2259 112 20 0 chr10 37745012 37745316 -102571449 - AluSq SINE Alu -3 310 1 7701 208 40 24 chr10 37745316 37746025 -102570740 - L1MB7 LINE L1 -1114 5139 4443 2213 113 3 7 chr10 37746025 37746325 -102570440 - AluSx SINE Alu -12 300 2 7701 208 40 24 chr10 37746325 37747256 -102569509 - L1MB7 LINE L1 -1810 4443 3436 963 136 14 0 chr10 37747265 37747412 -102569353 + AluJb SINE Alu 157 305 -7 2416 76 3 3 chr10 37747467 37747768 -102568997 - AluSp SINE Alu -12 301 1 613 186 186 0 chr10 37747768 37747935 -102568830 - L1MB3 LINE L1 -133 6050 5853 1109 160 7 28 chr10 37747937 37748177 -102568588 - L1MB4 LINE L1 -267 5913 5708 * 9783 162 30 34 chr10 37748146 37748538 -102568227 + L1P LINE L1 2872 3264 -2882 1916 159 0 3 chr10 37748538 37748846 -102567919 + AluSx SINE Alu 5 311 -1 9783 162 30 34 chr10 37748846 37750403 -102566362 + L1P LINE L1 3264 4813 -1333 258 267 13 0 chr10 37750404 37750479 -102566286 - L1ME1 LINE L1 -5 6161 6086 225 88 0 0 chr10 37750494 37750528 -102566237 - MER3 DNA MER1_type -160 49 16 1512 208 80 54 chr10 37750528 37750748 -102566017 - L1ME1 LINE L1 -143 6023 5810 1682 168 3 48 chr10 37750748 37751058 -102565707 - AluJo SINE Alu -16 296 1 1512 208 80 54 chr10 37751058 37751336 -102565429 - L1ME1 LINE L1 -356 5810 5512 * 2309 263 57 8 chr10 37751333 37752267 -102564498 - L1MB7 LINE L1 -3316 2899 1962 915 282 61 55 chr10 37752310 37752800 -102563965 - L1MEc LINE L1 -5881 515 23 2300 96 0 10 chr10 37753053 37753344 -102563421 - AluSq SINE Alu -25 288 1 216 234 21 0 chr10 37753393 37753440 -102563325 - MIR SINE MIR -201 61 14 1907 132 13 23 chr10 37753865 37754169 -102562596 - AluJb SINE Alu -11 301 1 2166 90 4 7 chr10 37754176 37754493 -102562272 - AluSc SINE Alu 0 320 5 2389 93 0 0 chr10 37754547 37754847 -102561918 - AluSx SINE Alu -12 300 1 1697 137 48 22 chr10 37755150 37755421 -102561344 + AluJo SINE Alu 1 278 -34 2223 87 4 0 chr10 37755421 37755697 -102561068 - AluSp SINE Alu -17 296 20 353 85 0 34 chr10 37755723 37755734 -102561031 + (GGAA)n Simple_repeat Simple_repeat 4 14 -46 2511 76 3 0 chr10 37755734 37756037 -102560728 + AluSp SINE Alu 3 306 -7 353 85 0 34 chr10 37756037 37756084 -102560681 + (GGAA)n Simple_repeat Simple_repeat 14 60 0 2848 13 0 3 chr10 37756534 37756846 -102559919 - AluYa5 SINE Alu 0 311 1 1028 127 153 0 chr10 37756888 37757077 -102559688 - MER20 DNA MER1_type 0 219 2 2291 117 0 0 chr10 37758273 37758571 -102558194 - AluSx SINE Alu -14 298 1 216 226 48 24 chr10 37758893 37758977 -102557788 + CT-rich Low_complexity Low_complexity 3 88 0 333 333 91 16 chr10 37759305 37759491 -102557274 + MIR SINE MIR 62 261 -1 207 194 0 0 chr10 37759897 37759933 -102556832 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 236 291 0 0 chr10 37759933 37760012 -102556753 - L1MC4 LINE L1 -1340 6702 6624 228 211 0 89 chr10 37759938 37760028 -102556737 + L1MC4 LINE L1 6614 6695 -1347 * 2314 94 3 0 chr10 37760055 37760353 -102556412 - AluSx SINE Alu -13 299 1 193 304 51 11 chr10 37760365 37760452 -102556313 - MIR SINE MIR -66 142 53 1726 164 7 18 chr10 37760503 37760784 -102555981 + AluJo SINE Alu 1 278 -34 189 343 122 14 chr10 37761085 37761371 -102555394 - L2 LINE L2 -785 2529 2213 1900 161 13 0 chr10 37761659 37761957 -102554808 - AluJo SINE Alu -10 302 1 300 106 0 0 chr10 37761980 37762027 -102554738 - L1MA4A LINE L1 -5 6298 6252 222 37 0 0 chr10 37762027 37762054 -102554711 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2255 85 0 3 chr10 37762054 37762336 -102554429 - AluY SINE Alu -30 281 1 3463 137 48 5 chr10 37762336 37762936 -102553829 - L1MA4 LINE L1 -320 5980 5355 265 232 29 0 chr10 37763025 37763094 -102553671 - Charlie7 DNA MER1_type -1923 689 619 864 121 0 0 chr10 37763095 37763211 -102553554 + AluJb SINE Alu 1 116 -196 450 0 0 0 chr10 37763211 37763261 -102553504 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 1897 144 0 23 chr10 37763272 37763577 -102553188 + AluJo SINE Alu 6 303 -9 1875 156 0 3 chr10 37763631 37763914 -102552851 + AluJo SINE Alu 1 282 -30 1821 183 0 0 chr10 37763940 37764229 -102552536 + AluJo SINE Alu 1 289 -23 2399 89 0 13 chr10 37764332 37764645 -102552120 + AluY SINE Alu 1 309 -2 838 212 6 0 chr10 37764986 37765151 -102551614 - FRAM SINE Alu 0 166 1 258 291 19 39 chr10 37765239 37765342 -102551423 + MIR SINE MIR 30 130 -78 2001 158 0 10 chr10 37765927 37766237 -102550528 + AluJb SINE Alu 1 307 -5 240 193 217 0 chr10 37766279 37766362 -102550403 - L1ME4a LINE L1 0 6121 6021 2088 124 45 28 chr10 37766422 37766778 -102549987 - THE1B LTR MaLR -2 362 1 28 0 0 0 chr10 37766782 37766810 -102549955 + AT_rich Low_complexity Low_complexity 1 28 0 27 39 0 19 chr10 37767017 37767038 -102549727 + AT_rich Low_complexity Low_complexity 1 21 -30 2335 66 7 0 chr10 37767038 37767325 -102549440 + AluSp SINE Alu 2 290 -23 27 39 0 19 chr10 37767325 37767355 -102549410 + AT_rich Low_complexity Low_complexity 21 51 0 4709 113 26 9 chr10 37767356 37768056 -102548709 - L1PA13 LINE L1 -19 6144 5433 521 223 241 36 chr10 37768056 37768411 -102548354 - L1MB3 LINE L1 -38 6143 5740 2168 103 0 3 chr10 37769101 37769383 -102547382 - AluSx SINE Alu -31 281 1 844 169 0 0 chr10 37769400 37769524 -102547241 - FLAM_C SINE Alu -16 127 4 307 277 64 0 chr10 37769526 37769620 -102547145 - L2 LINE L2 -8 3305 3206 1830 154 7 0 chr10 37770183 37770494 -102546271 + AluJo SINE Alu 1 313 0 215 279 12 12 chr10 37770991 37771077 -102545688 + (TAAAG)n Simple_repeat Simple_repeat 2 87 0 195 42 0 0 chr10 37771091 37771115 -102545650 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 242 182 0 0 chr10 37771160 37771204 -102545561 - L1M4 LINE L1 -2658 3488 3445 1214 186 43 9 chr10 37771206 37771437 -102545328 - AluJo SINE Alu -19 293 55 723 229 17 40 chr10 37771470 37771670 -102545095 + FRAM SINE Alu 1 176 0 273 303 110 0 chr10 37771672 37771827 -102544938 + L1ME1 LINE L1 3280 3451 -2695 1093 84 0 0 chr10 37771830 37771961 -102544804 + AluSg SINE Alu 1 131 -179 1676 124 0 4 chr10 37771973 37772207 -102544558 + AluSg/x SINE Alu 71 303 -9 5297 205 72 53 chr10 37772207 37773096 -102543669 + L1ME1 LINE L1 3461 4331 -1835 1678 154 95 0 chr10 37773096 37773369 -102543396 + AluJo SINE Alu 1 299 -13 5297 205 72 53 chr10 37773369 37773631 -102543134 + L1ME1 LINE L1 4331 4586 -1580 1872 159 3 20 chr10 37773631 37773927 -102542838 + AluJb SINE Alu 5 295 -17 5297 205 72 53 chr10 37773927 37774314 -102542451 + L1ME1 LINE L1 4586 4964 -1202 2031 117 10 14 chr10 37774314 37774605 -102542160 + AluSc SINE Alu 5 294 -15 5297 205 72 53 chr10 37774605 37775166 -102541599 + L1ME1 LINE L1 4964 5513 -653 2142 114 3 10 chr10 37775166 37775465 -102541300 - AluSx SINE Alu -15 297 1 5297 205 72 53 chr10 37775465 37775973 -102540792 + L1ME1 LINE L1 5513 6112 -54 2086 128 7 3 chr10 37775973 37776269 -102540496 + AluSx SINE Alu 1 297 -15 2252 98 3 0 chr10 37777418 37777704 -102539061 - AluSx SINE Alu -15 297 11 2067 97 45 10 chr10 37777716 37778006 -102538759 - AluSp SINE Alu -13 300 1 1784 169 20 10 chr10 37778033 37778329 -102538436 + AluJo SINE Alu 1 299 -13 235 214 107 0 chr10 37778330 37778386 -102538379 - L1ME1 LINE L1 -5 6161 6100 421 98 16 0 chr10 37778386 37778447 -102538318 - Alu SINE Alu -13 299 238 1537 163 56 11 chr10 37778853 37779123 -102537642 + AluJo SINE Alu 1 282 -30 225 0 0 0 chr10 37779126 37779151 -102537614 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 355 253 102 16 chr10 37779487 37779673 -102537092 - L1MC4a LINE L1 -1896 5912 5711 381 269 56 56 chr10 37781343 37781503 -102535262 + L1ME4a LINE L1 5544 5703 -418 1064 92 0 0 chr10 37781506 37781636 -102535129 + AluY SINE Alu 1 130 -181 366 237 83 26 chr10 37781650 37781806 -102534959 + L1ME4a LINE L1 5698 5862 -259 209 326 54 0 chr10 37782060 37782152 -102534613 - L2 LINE L2 -537 2777 2681 315 259 123 57 chr10 37782784 37782988 -102533777 - MLT1J LTR MaLR -11 500 206 2151 104 3 16 chr10 37782988 37783295 -102533470 - AluSx SINE Alu -9 303 1 315 259 123 57 chr10 37783295 37783370 -102533395 - MLT1J LTR MaLR -305 206 137 194 338 100 25 chr10 37784144 37784224 -102532541 + L2 LINE L2 3139 3224 -48 2410 80 0 0 chr10 37784851 37785140 -102531625 - AluY SINE Alu -22 289 1 693 144 0 18 chr10 37785276 37785387 -102531378 - FRAM SINE Alu -15 161 53 256 148 37 19 chr10 37787192 37787246 -102529519 + MIR3 SINE MIR 103 157 -51 198 0 0 0 chr10 37787565 37787587 -102529178 + (CAAAG)n Simple_repeat Simple_repeat 2 23 0 591 180 49 16 chr10 37787811 37787933 -102528832 + AluJo SINE Alu 1 126 -186 353 140 9 140 chr10 37787986 37788093 -102528672 + AluYa5 SINE Alu 87 179 -122 252 0 9 0 chr10 37788093 37788164 -102528601 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 131 0 22 chr10 37788165 37788348 -102528417 + AluJo SINE Alu 134 312 0 229 178 27 27 chr10 37788664 37788737 -102528028 + G-rich Low_complexity Low_complexity 4 76 0 24 77 0 0 chr10 37788934 37788986 -102527779 + GC_rich Low_complexity Low_complexity 1 52 0 236 143 18 0 chr10 37789078 37789134 -102527631 + (CCG)n Simple_repeat Simple_repeat 3 59 0 200 161 18 36 chr10 37789187 37789243 -102527522 + C-rich Low_complexity Low_complexity 1 55 0 198 315 14 0 chr10 37790584 37790657 -102526108 + MIR SINE MIR 183 256 -6 241 295 32 11 chr10 37791461 37791556 -102525209 + MER5B DNA MER1_type 82 178 0 206 266 0 16 chr10 37791658 37791722 -102525043 + (TA)n Simple_repeat Simple_repeat 1 63 0 465 285 66 0 chr10 37792283 37792434 -102524331 - MIR SINE MIR -36 226 66 792 263 152 42 chr10 37792722 37792738 -102524027 + L2 LINE L2 2409 2422 -891 2277 113 3 0 chr10 37792738 37793040 -102523725 - AluSx SINE Alu -9 303 1 792 263 152 42 chr10 37793040 37793833 -102522932 + L2 LINE L2 2422 3309 -4 309 261 11 11 chr10 37794774 37794862 -102521903 - MIR3 SINE MIR -39 169 82 338 271 34 8 chr10 37794953 37795071 -102521694 - MIR SINE MIR -108 154 34 2136 104 52 3 chr10 37795237 37795525 -102521240 - AluSx SINE Alu -10 302 1 2360 108 0 0 chr10 37795619 37795926 -102520839 - AluSq SINE Alu -6 307 1 1932 94 27 106 chr10 37796646 37796805 -102519960 + AluYb8 SINE Alu 1 122 -196 6353 28 1 8 chr10 37796805 37797549 -102519216 - L1PA4 LINE L1 0 6155 5417 1932 94 27 106 chr10 37797549 37797720 -102519045 + AluYb8 SINE Alu 122 305 -13 1883 120 22 4 chr10 37798879 37799153 -102517612 - AluJo SINE Alu -23 289 11 221 0 0 33 chr10 37799185 37799215 -102517550 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 335 254 36 27 chr10 37799219 37799329 -102517436 - MARNA DNA Mariner -381 205 95 1154 190 49 9 chr10 37801198 37801424 -102515341 - MER8 DNA MER2_type -4 235 1 542 185 136 82 chr10 37801897 37802081 -102514684 - MER20 DNA MER1_type 0 219 26 21 57 0 0 chr10 37803906 37803941 -102512824 + AT_rich Low_complexity Low_complexity 1 35 0 191 362 78 7 chr10 37804840 37804981 -102511784 - L2 LINE L2 -42 3230 3080 1940 166 0 3 chr10 37805155 37805457 -102511308 - AluJb SINE Alu -5 307 7 1363 204 123 110 chr10 37806044 37806421 -102510344 - MLT1F1 LTR MaLR 0 567 154 2216 117 3 0 chr10 37806421 37806721 -102510044 - AluSx SINE Alu -11 301 1 1363 204 123 110 chr10 37806721 37806878 -102509887 - MLT1F1 LTR MaLR -413 154 1 2316 113 0 3 chr10 37807632 37807943 -102508822 + AluSx SINE Alu 2 311 -1 21 0 0 0 chr10 37807973 37807994 -102508771 + AT_rich Low_complexity Low_complexity 1 21 0 485 312 139 20 chr10 37809074 37809398 -102507367 + L2 LINE L2 2715 2999 -314 351 89 0 0 chr10 37809398 37809454 -102507311 + (CCCCAG)n Simple_repeat Simple_repeat 4 59 0 485 312 139 20 chr10 37809454 37809652 -102507113 + L2 LINE L2 2999 3309 -4 2200 173 199 22 chr10 37809698 37810292 -102506473 - L1MC4 LINE L1 -458 7584 6886 21 0 0 0 chr10 37810452 37810473 -102506292 + AT_rich Low_complexity Low_complexity 1 21 0 1790 228 87 27 chr10 37810830 37811357 -102505408 - REP3 LTR ERV 0 562 4 2920 146 42 43 chr10 37811684 37811728 -102505037 - L1MB3 LINE L1 -9 6174 6131 207 0 0 0 chr10 37811728 37811751 -102505014 + (TTA)n Simple_repeat Simple_repeat 2 24 0 725 189 0 0 chr10 37811751 37811873 -102504892 - FLAM_C SINE Alu -7 126 5 2920 146 42 43 chr10 37811873 37812381 -102504384 - L1MB3 LINE L1 -50 6133 5622 1943 166 16 0 chr10 37812511 37812818 -102503947 - AluJo SINE Alu 0 312 1 23 54 0 0 chr10 37812930 37812967 -102503798 + AT_rich Low_complexity Low_complexity 1 37 0 2207 110 7 0 chr10 37813101 37813393 -102503372 - AluSg SINE Alu -16 294 1 309 314 105 14 chr10 37813426 37813636 -102503129 - L1ME4a LINE L1 -129 5992 5764 451 127 0 0 chr10 37814038 37814101 -102502664 + MER46B DNA MER2_type 3 65 -296 1570 129 95 24 chr10 37814136 37814431 -102502334 + MER46B DNA MER2_type 45 235 -1 1665 174 37 38 chr10 37814957 37815721 -102501044 - SVA Other Other -518 868 388 790 168 51 30 chr10 37817890 37818087 -102498678 + L1MD3 LINE L1 7779 7979 -16 1220 170 15 0 chr10 37818940 37819146 -102497619 + MER3 DNA MER1_type 1 209 0 239 284 147 0 chr10 37819367 37819469 -102497296 - L1ME LINE L1 -219 5902 5786 417 222 210 18 chr10 37819546 37819713 -102497052 + MIR SINE MIR 64 262 0 194 326 65 11 chr10 37820409 37820501 -102496264 + MIR SINE MIR 33 129 -79 192 77 0 0 chr10 37822338 37822364 -102494401 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 2524 57 0 0 chr10 37822391 37822687 -102494078 - AluY SINE Alu -15 296 1 2393 87 0 0 chr10 37822951 37823251 -102493514 - AluY SINE Alu -11 300 1 187 323 73 10 chr10 37823350 37823446 -102493319 + L2 LINE L2 3139 3240 -32 2255 102 7 0 chr10 37824941 37825234 -102491531 - AluSq SINE Alu -18 295 1 421 309 59 15 chr10 37825369 37825573 -102491192 + MIR SINE MIR 36 248 -14 2119 159 50 10 chr10 37825770 37826154 -102490611 + Tigger2a DNA MER2_type 36 434 0 26 0 0 0 chr10 37826500 37826526 -102490239 + AT_rich Low_complexity Low_complexity 1 26 0 1842 193 55 38 chr10 37827332 37827784 -102488981 - MLT1D LTR MaLR 0 505 46 3002 171 112 22 chr10 37828377 37828430 -102488335 - Charlie1 DNA MER1_type 0 2761 2714 3626 149 22 11 chr10 37828430 37828702 -102488063 + L1MB7 LINE L1 5518 5786 -398 1475 157 8 8 chr10 37828702 37828938 -102487827 + MER46A DNA MER2_type 1 236 0 3626 149 22 11 chr10 37828938 37829258 -102487507 + L1MB7 LINE L1 5786 6120 -64 3575 140 43 12 chr10 37829258 37829842 -102486923 + MER7C DNA MER2_type 1 602 0 3626 149 22 11 chr10 37829842 37829891 -102486874 + L1MB7 LINE L1 6120 6167 -17 3002 171 112 22 chr10 37829891 37830593 -102486172 - Charlie1 DNA MER1_type -47 2714 1938 222 374 15 33 chr10 37830933 37831128 -102485637 - MIR SINE MIR -51 211 25 1620 175 59 27 chr10 37831286 37831691 -102485074 - LTR52 LTR ERVL -3 418 1 234 233 55 27 chr10 37832741 37832814 -102483951 - L1MC5 LINE L1 -50 7911 7837 369 265 15 23 chr10 37832849 37832981 -102483784 - MIR SINE MIR -51 211 81 2701 209 127 27 chr10 37833226 37833514 -102483251 + MER97a DNA MER1_type 1 259 -635 2333 94 0 19 chr10 37833514 37833823 -102482942 + AluSx SINE Alu 1 303 -9 2701 209 127 27 chr10 37833823 37834347 -102482418 + MER97a DNA MER1_type 259 894 0 815 185 57 38 chr10 37834721 37834932 -102481833 + MER20 DNA MER1_type 1 215 -4 382 244 23 38 chr10 37834932 37835063 -102481702 + MIR SINE MIR 86 214 -48 831 270 39 13 chr10 37835209 37835442 -102481323 - MER8 DNA MER2_type 0 239 1 2342 108 3 0 chr10 37835539 37835844 -102480921 - AluSq SINE Alu -7 306 1 241 198 77 33 chr10 37836070 37836161 -102480604 + MER103 DNA DNA 11 105 -61 22 0 0 0 chr10 37836189 37836211 -102480554 + AT_rich Low_complexity Low_complexity 1 22 0 3053 108 19 13 chr10 37836367 37836829 -102479936 - MER4C LTR ERV1 0 465 1 413 188 148 16 chr10 37837658 37837786 -102478979 + MER97a DNA MER1_type? 545 689 -205 439 226 11 21 chr10 37837790 37837883 -102478882 - L1ME LINE L1 -585 5579 5488 1912 212 56 25 chr10 37840894 37841379 -102475386 - MLT1D LTR MaLR 0 505 6 222 118 0 0 chr10 37841459 37841493 -102475272 + (CTA)n Simple_repeat Simple_repeat 2 35 0 211 253 84 21 chr10 37841515 37841610 -102475155 + L2 LINE L2 3162 3262 -10 2203 114 7 0 chr10 37841676 37841973 -102474792 - AluSg SINE Alu -11 299 1 22 0 0 0 chr10 37843037 37843059 -102473706 + AT_rich Low_complexity Low_complexity 1 22 0 224 155 0 155 chr10 37843220 37843278 -102473487 + MIR SINE MIR 56 104 -158 3017 120 17 69 chr10 37843283 37843875 -102472890 - LTR10A LTR ERV1 -48 561 1 296 312 43 0 chr10 37843887 37843980 -102472785 + MIR SINE MIR 120 216 -46 221 325 0 12 chr10 37844027 37844110 -102472655 + CT-rich Low_complexity Low_complexity 3 84 0 309 193 18 0 chr10 37844297 37844354 -102472411 - L1ME4a LINE L1 -9 6112 6055 298 311 77 68 chr10 37844566 37844801 -102471964 - L2 LINE L2 -44 3228 2992 969 211 55 7 chr10 37845070 37845451 -102471314 + MER31B LTR ERV1 1 466 0 695 124 124 0 chr10 37846041 37846154 -102470611 + FLAM_A SINE Alu 4 130 -3 1218 178 22 109 chr10 37847490 37847982 -102468783 - MER31A LTR ERV1 0 466 1 290 323 71 8 chr10 37848265 37848392 -102468373 + L2 LINE L2 3137 3271 -1 809 164 0 22 chr10 37900439 37900573 -102416192 - FLAM_C SINE Alu -1 132 2 2136 191 81 37 chr10 37901341 37901833 -102414932 + MER68 LTR ERV1 1 514 -48 210 360 35 0 chr10 37902626 37902712 -102414053 - L2 LINE L2 -1 3271 3183 618 255 99 5 chr10 37902766 37902958 -102413807 + MIR SINE MIR 23 232 -30 378 271 300 18 chr10 37903127 37904719 -102412046 - L2 LINE L2 -438 2876 836 959 159 0 0 chr10 37905706 37905857 -102410908 - AluJo SINE Alu -30 282 132 200 280 43 75 chr10 37905935 37906028 -102410737 + L2 LINE L2 3152 3241 -31 547 280 151 11 chr10 37906486 37906757 -102410008 - L1M4 LINE L1 -1907 4239 3931 561 252 98 138 chr10 37906810 37906931 -102409834 - L1MEd LINE L1 -5069 1050 926 2116 182 3 11 chr10 37906931 37907293 -102409472 - MLT1A1 LTR MaLR -4 361 3 561 252 98 138 chr10 37907293 37908254 -102408511 - L1MEd LINE L1 -5193 926 12 222 236 0 42 chr10 37908409 37908481 -102408284 + GA-rich Low_complexity Low_complexity 3 71 0 181 194 16 16 chr10 37908481 37908543 -102408222 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 474 348 3 0 chr10 37908583 37908801 -102407964 + GA-rich Low_complexity Low_complexity 1 218 0 200 225 0 11 chr10 37908952 37909041 -102407724 + GA-rich Low_complexity Low_complexity 1 88 0 243 0 0 0 chr10 37909510 37909537 -102407228 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 323 167 0 94 chr10 37910128 37910224 -102406541 - L1ME4a LINE L1 -2 6119 6033 1162 161 45 36 chr10 37910285 37910509 -102406256 - MER46A DNA MER2_type -10 226 1 865 135 7 50 chr10 37911154 37911295 -102405470 - AluJo SINE Alu -177 135 1 350 312 64 50 chr10 37911577 37911795 -102404970 - MIR SINE MIR -11 251 31 487 255 67 27 chr10 37912904 37913053 -102403712 - MER104 DNA Tc2 -21 159 5 2360 70 27 3 chr10 37913508 37913808 -102402957 + AluY SINE Alu 1 307 -4 392 127 14 14 chr10 37915001 37915072 -102401693 + Charlie2a DNA MER1_type 1467 1537 -1325 272 154 19 0 chr10 37915128 37915180 -102401585 + Charlie2a DNA MER1_type 1523 1575 -1287 195 100 0 0 chr10 37916841 37916871 -102399894 + (A)n Simple_repeat Simple_repeat 1 30 0 1210 191 158 0 chr10 37917054 37917300 -102399465 - AluJo SINE Alu -20 292 8 395 249 76 83 chr10 37917307 37917584 -102399181 - L1ME4a LINE L1 -212 5909 5635 351 280 106 18 chr10 37917892 37918110 -102398655 + MER112 DNA MER1_type 17 253 -7 230 262 78 10 chr10 37919518 37919648 -102397117 + MIR SINE MIR 6 145 -76 961 173 0 62 chr10 37919874 37920053 -102396712 - FRAM SINE Alu -9 167 1 2334 82 10 10 chr10 37921654 37921948 -102394817 - AluY SINE Alu -17 294 1 312 214 36 62 chr10 37922618 37922730 -102394035 - L2 LINE L2 -55 3258 3150 1496 118 41 0 chr10 37923363 37923583 -102393182 - MER30 DNA MER1_type 0 230 2 214 246 0 0 chr10 37924231 37924288 -102392477 + MIR SINE MIR 65 121 -141 499 69 0 28 chr10 37924491 37924563 -102392202 + MER30 DNA MER1_type 1 70 -160 224 286 52 13 chr10 37924589 37924666 -102392099 + MIR SINE MIR 168 247 -15 2508 164 55 2 chr10 37925272 37925729 -102391036 - MER31A LTR ERV1 0 485 5 286 311 179 10 chr10 37927225 37927421 -102389344 + MIR SINE MIR 28 256 -6 21 0 0 0 chr10 37928665 37928686 -102388079 + AT_rich Low_complexity Low_complexity 1 21 0 353 315 67 17 chr10 37931639 37931817 -102384948 - MIR SINE MIR -2 260 74 306 238 20 82 chr10 37931983 37932130 -102384635 + L2 LINE L2 3163 3300 -13 231 36 0 0 chr10 37932130 37932158 -102384607 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 42882 34 30 2 chr10 37933315 37939303 -102377462 + L1PA3 LINE L1 1 6155 0 1909 156 3 7 chr10 37940215 37940503 -102376262 + AluJo SINE Alu 1 287 -25 657 286 89 19 chr10 37941961 37942161 -102374604 - MER102b DNA MER1_type -1091 337 106 470 17 17 0 chr10 37942161 37942220 -102374545 + (TG)n Simple_repeat Simple_repeat 2 61 0 657 286 89 19 chr10 37942220 37942334 -102374431 - MER102b DNA MER1_type -1322 106 1 425 38 0 0 chr10 37943911 37943964 -102372801 - MADE1 DNA Mariner 0 80 28 195 276 37 52 chr10 37944381 37944515 -102372250 + L2 LINE L2 1545 1676 -1638 22 56 0 0 chr10 37944808 37944844 -102371921 + AT_rich Low_complexity Low_complexity 1 36 0 2679 58 0 0 chr10 37944854 37945163 -102371602 + AluY SINE Alu 1 309 -2 212 333 10 29 chr10 37945415 37945517 -102371248 + L2 LINE L2 2260 2359 -955 822 200 60 0 chr10 37945634 37945784 -102370981 - MER63 DNA MER1_type -277 785 1 260 370 20 0 chr10 37945832 37945932 -102370833 + L2 LINE L2 2542 2643 -671 850 243 90 23 chr10 37947936 37948236 -102368529 - Charlie2 DNA MER1_type 0 2862 2543 2133 120 82 15 chr10 37948376 37948717 -102368048 - THE1B LTR MaLR 0 364 1 452 245 127 42 chr10 37952833 37953045 -102363720 - MIR SINE MIR 0 262 33 2041 132 0 0 chr10 37953847 37954162 -102362603 - AluSx SINE Alu 0 315 1 274 307 94 16 chr10 37954757 37954884 -102361881 + MIR SINE MIR 28 164 -98 2336 262 51 26 chr10 37955027 37955797 -102360968 - L1MC4 LINE L1 -553 7489 6701 1857 149 98 0 chr10 37955913 37956261 -102360504 - L1MB7 LINE L1 0 6184 5803 2141 115 0 0 chr10 37956475 37956753 -102360012 - AluSx SINE Alu -34 278 1 1814 184 0 7 chr10 37957388 37957692 -102359073 - AluJo SINE Alu -8 304 3 238 260 226 20 chr10 37957799 37957945 -102358820 - MIR SINE MIR -3 259 84 330 318 0 0 chr10 37957969 37958054 -102358711 + MER94 DNA DNA 49 133 -1 281 292 62 0 chr10 37958058 37958154 -102358611 - MIR3 SINE MIR -102 106 5 235 309 127 33 chr10 37958739 37958920 -102357845 + MIR SINE MIR 24 221 -41 182 323 156 11 chr10 37959403 37959666 -102357099 - L2 LINE L2 -978 2336 2036 555 229 7 46 chr10 37960732 37960885 -102355880 - MIR SINE MIR -40 222 76 198 0 0 0 chr10 37961253 37961275 -102355490 + (A)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 37963819 37963839 -102352926 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 37963839 37963866 -102352899 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 37964093 37964115 -102352650 + AT_rich Low_complexity Low_complexity 1 22 0 394 286 32 8 chr10 37965454 37965580 -102351185 - MER5B DNA MER1_type -5 173 45 195 291 0 0 chr10 37965580 37965635 -102351130 - MER5B DNA MER1_type -82 96 42 188 298 0 0 chr10 37965734 37965791 -102350974 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 37965786 37965843 -102350922 - MER5B DNA MER1_type -80 98 42 * 212 281 0 0 chr10 37965838 37965895 -102350870 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 37965994 37966051 -102350714 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 37966046 37966103 -102350662 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 37966098 37966155 -102350610 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 37966254 37966311 -102350454 - MER5B DNA MER1_type -80 98 42 186 298 0 0 chr10 37966306 37966363 -102350402 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 37966514 37966571 -102350194 - MER5B DNA MER1_type -80 98 42 333 290 11 0 chr10 37966618 37966711 -102350054 - MER5B DNA MER1_type -80 98 5 1750 147 68 3 chr10 37966949 37967242 -102349523 - AluJb SINE Alu 0 312 1 446 148 37 0 chr10 37968497 37968578 -102348187 + LTR42 LTR ERVL 5 88 -407 388 343 77 21 chr10 37969831 37970117 -102346648 + LTR57-int LTR ERVL 1856 2157 -3186 304 275 141 21 chr10 37970940 37971082 -102345683 - MIR SINE MIR -71 191 33 875 261 77 19 chr10 37972020 37972345 -102344420 + L1ME4a LINE L1 5491 5834 -287 255 129 100 57 chr10 37972459 37972529 -102344236 + L1ME4a LINE L1 6048 6120 -1 461 262 163 0 chr10 37974627 37974799 -102341966 - MIR SINE MIR -14 248 49 2135 81 0 75 chr10 37975599 37975907 -102340858 + AluSc SINE Alu 1 285 -24 25 31 0 0 chr10 37976593 37976625 -102340140 + AT_rich Low_complexity Low_complexity 1 32 0 2229 101 0 29 chr10 37976758 37977064 -102339701 + AluSx SINE Alu 1 297 -15 1910 156 10 0 chr10 37977967 37978256 -102338509 + AluJb SINE Alu 1 292 -20 421 325 77 42 chr10 37980493 37981054 -102335711 + L2 LINE L2 2723 3304 -9 2112 108 14 14 chr10 37981202 37981499 -102335266 - AluSx SINE Alu -15 297 1 1724 176 68 8 chr10 37981754 37982124 -102334641 - L1MB8 LINE L1 0 6178 5787 204 40 0 0 chr10 37982128 37982153 -102334612 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 27 0 0 chr10 37982153 37982177 -102334588 + (TG)n Simple_repeat Simple_repeat 1 61 0 312 27 0 0 chr10 37982177 37982214 -102334551 + (TG)n Simple_repeat Simple_repeat 2 38 0 3192 115 2 0 chr10 37982240 37982666 -102334099 - LTR3 LTR ERVK -1 431 5 387 105 0 0 chr10 37982680 37982737 -102334028 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 1798 183 24 12 chr10 37982753 37983092 -102333673 - MER2 DNA MER2_type -2 343 1 8222 204 71 29 chr10 37983097 37983210 -102333555 - L1MB8 LINE L1 -406 5778 5671 2310 145 8 0 chr10 37983210 37983562 -102333203 + THE1A LTR MaLR 1 355 0 11266 94 34 1 chr10 37983562 37985091 -102331674 + THE1A-int LTR MaLR 1 1580 0 2179 128 11 40 chr10 37985091 37985466 -102331299 + THE1B LTR MaLR 1 364 0 8222 204 71 29 chr10 37985466 37986684 -102330081 - L1MB8 LINE L1 -513 5671 4506 2378 97 0 0 chr10 37986684 37986983 -102329782 + AluSc SINE Alu 1 299 -10 8222 204 71 29 chr10 37986983 37988396 -102328369 - L1MB8 LINE L1 -1678 4506 2917 804 152 41 174 chr10 37988387 37988588 -102328177 - L1MC3 LINE L1 0 7785 7640 * 1399 197 14 21 chr10 37988588 37988877 -102327888 - AluJo SINE Alu -25 287 1 804 152 41 174 chr10 37988877 37988991 -102327774 - L1MC3 LINE L1 -145 7640 7512 318 191 0 0 chr10 37988991 37989055 -102327710 - L1MD3 LINE L1 -210 7777 7512 283 281 0 0 chr10 37989055 37989119 -102327646 - L1MC3 LINE L1 -210 7575 7512 * 318 246 0 0 chr10 37989118 37989183 -102327582 - L1MC3 LINE L1 -209 7576 7512 288 218 0 0 chr10 37989192 37989247 -102327518 - L1MD3 LINE L1 -218 7777 7723 * 2546 184 25 4 chr10 37989225 37989708 -102327057 - L1MC3 LINE L1 -181 7604 7112 234 217 0 117 chr10 37990228 37990348 -102326417 + MER112 DNA MER1_type 149 254 -6 2532 207 53 17 chr10 37990350 37990577 -102326188 - MER68 LTR ERV1 0 562 345 6373 149 66 9 chr10 37990577 37991738 -102325027 + Tigger3b DNA MER2_type 3 1230 -1 2532 207 53 17 chr10 37991738 37992052 -102324713 - MER68 LTR ERV1 -217 345 1 236 327 196 6 chr10 37992242 37992410 -102324355 - Charlie8 DNA MER1_type -2209 208 9 1435 196 22 90 chr10 37992452 37992865 -102323900 - MLT1B LTR MaLR -2 388 4 191 245 0 0 chr10 37992913 37992962 -102323803 - L2 LINE L2 -671 2643 2595 24 53 0 0 chr10 37992964 37993002 -102323763 + AT_rich Low_complexity Low_complexity 1 38 0 25 65 0 0 chr10 37993072 37993118 -102323647 + AT_rich Low_complexity Low_complexity 1 46 0 2447 142 54 14 chr10 37995204 37995433 -102321332 - Tigger2 DNA MER2_type 0 2718 2500 363 89 0 0 chr10 37995433 37995489 -102321276 + (TA)n Simple_repeat Simple_repeat 2 57 0 2030 102 3 0 chr10 37995489 37995773 -102320992 - AluSg SINE Alu -25 285 1 2447 142 54 14 chr10 37995773 37995971 -102320794 - Tigger2 DNA MER2_type -217 2501 2273 401 180 0 0 chr10 37995968 37996029 -102320736 + MER8 DNA MER2_type 179 239 0 * 218 292 22 11 chr10 37997624 37997713 -102319052 + CT-rich Low_complexity Low_complexity 4 93 0 194 353 172 24 chr10 37997957 37998294 -102318471 + L2 LINE L2 2077 2463 -851 3912 127 41 73 chr10 37998982 37999767 -102316998 + L1MB3 LINE L1 5423 6182 -1 326 111 0 0 chr10 37999778 37999832 -102316933 + L1MD2 LINE L1 6305 6358 -1 366 246 98 8 chr10 38002253 38002375 -102314390 - MIR SINE MIR -60 202 70 452 189 110 0 chr10 38002702 38002829 -102313936 - MIR SINE MIR -50 212 72 181 294 59 35 chr10 38003622 38003707 -102313058 + L2 LINE L2 73 159 -3155 1117 251 169 20 chr10 38003958 38004024 -102312741 - Charlie2 DNA MER1_type -4 2858 2803 1829 98 4 4 chr10 38004024 38004280 -102312485 - AluSq SINE Alu -14 299 44 1117 251 169 20 chr10 38004280 38004652 -102312113 - Charlie2 DNA MER1_type -59 2803 2488 2029 112 3 10 chr10 38004652 38004947 -102311818 + AluSx SINE Alu 1 293 -19 1117 251 169 20 chr10 38004947 38005342 -102311423 - Charlie2 DNA MER1_type -374 2488 1857 728 314 48 9 chr10 38005334 38005649 -102311116 - Charlie2 DNA MER1_type -2532 330 4 * 2371 111 26 31 chr10 38005687 38006075 -102310690 + MLT1B LTR MaLR 5 390 0 4344 200 65 70 chr10 38006075 38007450 -102309315 + MLT1B-int LTR MaLR 1 1369 -2 1574 199 75 11 chr10 38007457 38007818 -102308947 + MLT1B LTR MaLR 7 390 0 304 266 217 28 chr10 38008519 38008662 -102308103 - L1ME4a LINE L1 -90 6031 5862 2489 213 17 2 chr10 38009470 38009996 -102306769 - L1MB3 LINE L1 -1 6182 5649 1125 112 0 12 chr10 38010884 38011053 -102305712 - AluSq SINE Alu -13 300 134 2135 112 0 10 chr10 38011053 38011357 -102305408 - AluSq SINE Alu -12 301 1 739 206 32 37 chr10 38012437 38012626 -102304139 + MER5A DNA MER1_type 2 189 0 2009 119 10 3 chr10 38013527 38013820 -102302945 - AluSx SINE Alu -17 295 1 1933 109 3 36 chr10 38013878 38014181 -102302584 - AluSg SINE Alu -9 301 9 2108 114 10 0 chr10 38019458 38019757 -102297008 - AluSq SINE Alu -11 302 1 21 36 0 0 chr10 38019806 38019834 -102296931 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr10 38020247 38020282 -102296483 + AT_rich Low_complexity Low_complexity 1 35 0 1170 181 27 50 chr10 38020282 38020433 -102296332 - AluJo SINE Alu -26 286 142 2042 124 0 3 chr10 38020433 38020732 -102296033 - AluSx SINE Alu -14 298 1 1170 181 27 50 chr10 38020732 38020840 -102295925 - AluJo SINE Alu -170 142 33 413 236 45 36 chr10 38021519 38021629 -102295136 + MIR SINE MIR 39 149 -59 402 277 88 20 chr10 38023453 38023601 -102293164 + L1M4 LINE L1 4243 4400 -1746 911 151 0 7 chr10 38023617 38023763 -102293002 + FRAM SINE Alu 14 158 -18 638 241 156 31 chr10 38023804 38023989 -102292776 - MIR SINE MIR -10 252 33 782 164 25 0 chr10 38023989 38024111 -102292654 - FLAM_C SINE Alu -8 125 1 638 241 156 31 chr10 38024111 38024149 -102292616 - MIR SINE MIR -229 33 1 1695 210 112 9 chr10 38024198 38024617 -102292148 + MLT1C LTR MaLR 6 467 0 2069 113 3 3 chr10 38024645 38024937 -102291828 + AluSx SINE Alu 1 292 -20 215 308 56 47 chr10 38025064 38025171 -102291594 + L2 LINE L2 2896 3003 -310 272 194 65 97 chr10 38025798 38025891 -102290874 - MIR SINE MIR -88 174 85 195 265 48 12 chr10 38025961 38026044 -102290721 + L2 LINE L2 3183 3268 -45 1731 172 64 23 chr10 38026313 38026959 -102289806 + L1MA7 LINE L1 5502 6291 0 267 247 99 62 chr10 38027237 38027399 -102289366 - MIR SINE MIR -10 252 85 1520 98 0 0 chr10 38028441 38028655 -102288110 + AluSg/x SINE Alu 93 306 -6 410 255 90 35 chr10 38028712 38028857 -102287908 + L3 LINE CR1 1259 1411 -166 336 302 151 35 chr10 38029092 38029264 -102287501 - MIR SINE MIR -65 197 6 2467 77 0 0 chr10 38029317 38029628 -102287137 + AluY SINE Alu 1 311 0 1657 121 28 0 chr10 38029758 38030007 -102286758 + AluSx SINE Alu 49 304 -8 1467 153 50 37 chr10 38030299 38030599 -102286166 - AluJo SINE Alu -8 304 1 237 342 50 25 chr10 38032382 38032543 -102284222 + L2 LINE L2 2644 2808 -506 183 184 0 0 chr10 38033629 38033667 -102283098 + CT-rich Low_complexity Low_complexity 2 39 0 333 0 0 0 chr10 38033910 38033947 -102282818 + (TG)n Simple_repeat Simple_repeat 1 37 0 1668 184 26 49 chr10 38034039 38034430 -102282335 - MLT1B LTR MaLR -8 382 1 554 39 13 0 chr10 38034524 38034601 -102282164 + (TC)n Simple_repeat Simple_repeat 1 78 0 2252 99 0 6 chr10 38034644 38034958 -102281807 - AluSx SINE Alu 0 312 1 1688 130 4 19 chr10 38035353 38035622 -102281143 - AluJo SINE Alu -16 296 32 1854 154 3 25 chr10 38036373 38036692 -102280073 - AluJb SINE Alu 0 312 1 1817 150 0 0 chr10 38037107 38037387 -102279378 + AluJo SINE Alu 1 280 -32 324 0 0 0 chr10 38037389 38037425 -102279340 + (TAA)n Simple_repeat Simple_repeat 2 37 0 245 259 0 54 chr10 38037722 38037739 -102279026 + T-rich Low_complexity Low_complexity 5 21 -89 2253 152 8 19 chr10 38037739 38038108 -102278657 - MLT1A1 LTR MaLR 0 365 1 245 259 0 54 chr10 38038108 38038202 -102278563 + T-rich Low_complexity Low_complexity 21 110 0 1685 311 64 24 chr10 38038426 38039346 -102277419 + L1MEc LINE L1 35 991 -5405 710 217 19 0 chr10 38039347 38039508 -102277257 + L1MEc LINE L1 2394 2557 -3658 354 341 24 0 chr10 38040562 38040685 -102276080 + MIR SINE MIR 13 138 -124 201 256 183 24 chr10 38041145 38041227 -102275538 + L2 LINE L2 3169 3263 -9 1504 139 20 51 chr10 38041846 38042141 -102274624 + AluJo SINE Alu 1 286 -26 183 42 0 0 chr10 38042141 38042165 -102274600 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 1073 108 0 29 chr10 38042498 38042768 -102273997 + (TTCC)n Simple_repeat Simple_repeat 4 438 0 2244 100 0 0 chr10 38043169 38043468 -102273297 - AluSx SINE Alu -13 299 1 1505 132 8 0 chr10 38043523 38043758 -102273007 + L1MA6 LINE L1 6059 6295 -5 2444 70 0 0 chr10 38044369 38044671 -102272094 + AluSc SINE Alu 1 302 -7 340 281 10 10 chr10 38044718 38044814 -102271951 - MIR SINE MIR -43 219 124 207 293 225 0 chr10 38045115 38045306 -102271459 - L2 LINE L2 -357 2957 2724 673 164 0 0 chr10 38045395 38045499 -102271266 + AluJb SINE Alu 2 105 -207 248 154 0 0 chr10 38045499 38045538 -102271227 + MADE1 DNA Mariner 42 80 0 617 259 186 22 chr10 38046008 38046282 -102270483 + L2 LINE L2 2982 3300 -13 2132 139 0 16 chr10 38046546 38046862 -102269903 - AluSx SINE Alu -1 311 1 324 0 0 0 chr10 38048036 38048072 -102268693 + (CA)n Simple_repeat Simple_repeat 2 37 0 396 351 146 0 chr10 38048246 38048451 -102268314 - MIR SINE MIR -12 250 16 2215 231 36 91 chr10 38048751 38049065 -102267700 - MER82 DNA MER2_type 0 653 396 1818 143 0 21 chr10 38049065 38049352 -102267413 + AluJo SINE Alu 12 292 -20 2215 231 36 91 chr10 38049352 38049728 -102267037 - MER82 DNA MER2_type -257 396 1 379 287 133 11 chr10 38049732 38049920 -102266845 - MIR SINE MIR -9 253 43 1621 181 17 10 chr10 38049950 38050242 -102266523 - AluJo SINE Alu -14 298 5 2289 100 0 10 chr10 38050499 38050799 -102265966 - AluSx SINE Alu -15 297 1 257 329 0 26 chr10 38051108 38051184 -102265581 - MIR SINE MIR -113 149 76 183 326 166 21 chr10 38051883 38052070 -102264695 - MIR SINE MIR -15 247 34 2435 87 0 0 chr10 38053222 38053522 -102263243 - AluY SINE Alu -11 300 1 719 194 0 8 chr10 38054484 38054635 -102262130 + FLAM_A SINE Alu 3 133 0 1892 125 7 49 chr10 38055831 38056136 -102260629 + AluJo SINE Alu 14 305 -7 2443 93 30 35 chr10 38056643 38056711 -102260054 - THE1B LTR MaLR 0 364 297 2423 87 0 0 chr10 38056711 38057009 -102259756 - AluY SINE Alu -12 299 2 2443 93 30 35 chr10 38057009 38057306 -102259459 - THE1B LTR MaLR -67 297 1 2228 127 3 0 chr10 38058392 38058692 -102258073 + AluSx SINE Alu 1 301 -11 367 264 151 6 chr10 38058913 38059072 -102257693 - MLT1J2 LTR MaLR -6 444 263 372 245 168 7 chr10 38059117 38059260 -102257505 - MLT1J1 LTR MaLR -277 169 4 1408 174 155 0 chr10 38060544 38060638 -102256127 + AluJo SINE Alu 2 80 -222 215 56 56 0 chr10 38060638 38060674 -102256091 + A-rich Low_complexity Low_complexity 4 41 0 1408 174 155 0 chr10 38060674 38060837 -102255928 + AluJo SINE Alu 80 299 -3 246 315 7 56 chr10 38060921 38061064 -102255701 + MIR SINE MIR 106 241 -21 1996 126 20 7 chr10 38061959 38062252 -102254513 + AluSx SINE Alu 1 297 -15 1822 149 0 51 chr10 38062566 38062882 -102253883 + AluJo SINE Alu 1 300 -12 1520 140 93 36 chr10 38062897 38063175 -102253590 + AluJo SINE Alu 1 294 -18 226 358 41 41 chr10 38063887 38064010 -102252755 - MIR SINE MIR -118 144 22 1834 137 48 34 chr10 38064135 38064428 -102252337 - AluJo SINE Alu -15 297 1 1673 167 13 39 chr10 38064919 38065225 -102251540 - AluJo SINE Alu -14 298 1 787 211 0 0 chr10 38065347 38065480 -102251285 + FLAM_A SINE Alu 1 133 0 2407 63 0 30 chr10 38065491 38065825 -102250940 + AluY SINE Alu 1 311 0 832 94 8 0 chr10 38066449 38066566 -102250199 - MSTB1 LTR MaLR 0 432 315 2467 110 31 3 chr10 38066567 38066921 -102249844 + THE1B LTR MaLR 1 364 0 1938 139 3 63 chr10 38066982 38067314 -102249451 - AluJo SINE Alu 0 312 1 263 328 39 0 chr10 38067317 38067445 -102249320 - L2 LINE L2 -957 2357 2225 2208 130 0 9 chr10 38067751 38068066 -102248699 - AluSx SINE Alu 0 312 1 1070 122 0 19 chr10 38068512 38068711 -102248054 - AluSg/x SINE Alu 0 323 128 399 270 40 52 chr10 38069083 38069257 -102247508 - MIR SINE MIR -8 254 83 1702 194 3 28 chr10 38069324 38069643 -102247122 - AluJb SINE Alu -1 311 1 344 286 298 17 chr10 38070046 38070224 -102246541 - MIR SINE MIR -14 248 21 2272 109 10 6 chr10 38070225 38070536 -102246229 + AluSx SINE Alu 1 312 0 2459 165 52 0 chr10 38070885 38071290 -102245475 - MSTB LTR MaLR 0 426 1 2314 117 7 0 chr10 38071446 38071754 -102245011 + AluSq SINE Alu 1 310 -3 5412 146 5 0 chr10 38072463 38073346 -102243419 - L1PA15 LINE L1 0 6165 5279 2092 112 54 17 chr10 38073363 38073657 -102243108 - AluSx SINE Alu -7 305 1 2045 141 0 10 chr10 38074742 38075041 -102241724 - AluJo SINE Alu -16 296 1 196 245 0 19 chr10 38075242 38075295 -102241470 + L2 LINE L2 3262 3313 0 1529 179 29 58 chr10 38075449 38075757 -102241008 - AluJb SINE Alu -13 299 1 216 298 0 64 chr10 38075800 38075894 -102240871 - MIR SINE MIR -71 191 104 665 294 40 78 chr10 38076046 38076471 -102240294 + MLT1I LTR MaLR 1 409 0 216 184 0 0 chr10 38076499 38076548 -102240217 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 3575 126 20 32 chr10 38076562 38077127 -102239638 + L1MB2 LINE L1 5574 6133 -38 2399 73 21 0 chr10 38077127 38077413 -102239352 - AluSq SINE Alu -21 292 1 3575 126 20 32 chr10 38077413 38077449 -102239316 + L1MB2 LINE L1 6133 6168 -3 2061 139 3 13 chr10 38077511 38077812 -102238953 - AluSx SINE Alu -14 298 1 774 205 110 50 chr10 38077814 38078067 -102238698 - MIR SINE MIR -1 261 13 189 0 0 0 chr10 38078716 38078737 -102238028 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2784 158 6 6 chr10 38078737 38079217 -102237548 - L1PA16 LINE L1 -23 6143 5664 304 268 0 0 chr10 38079513 38079610 -102237155 + (TA)n Simple_repeat Simple_repeat 1 97 0 615 260 5 78 chr10 38079646 38079838 -102236927 - MER5B DNA MER1_type 0 178 1 1521 174 66 41 chr10 38080430 38080793 -102235972 - THE1C LTR MaLR -3 372 1 1734 183 35 0 chr10 38081071 38081360 -102235405 - AluJo SINE Alu -13 299 1 242 255 98 20 chr10 38081452 38081554 -102235211 + MIR3 SINE MIR 50 159 -49 2139 114 10 0 chr10 38081828 38082118 -102234647 - AluSx SINE Alu -19 293 1 23 54 0 0 chr10 38085917 38085954 -102230811 + AT_rich Low_complexity Low_complexity 1 37 0 317 167 9 46 chr10 38086618 38086726 -102230039 + C-rich Low_complexity Low_complexity 6 109 0 195 14 100 43 chr10 38087484 38087554 -102229211 + (CCGCG)n Simple_repeat Simple_repeat 4 77 0 23 0 0 0 chr10 38087558 38087581 -102229184 + GC_rich Low_complexity Low_complexity 1 23 0 238 157 14 14 chr10 38087960 38088030 -102228735 + (CCG)n Simple_repeat Simple_repeat 3 72 0 39 88 0 0 chr10 38088033 38088135 -102228630 + GC_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr10 38088989 38089010 -102227755 + GC_rich Low_complexity Low_complexity 1 21 0 261 311 22 0 chr10 38090155 38090245 -102226520 + MIR SINE MIR 117 208 -54 27 49 0 0 chr10 38090584 38090625 -102226140 + GC_rich Low_complexity Low_complexity 1 41 0 337 247 17 17 chr10 38090810 38090984 -102225781 + CT-rich Low_complexity Low_complexity 2 175 0 1955 170 0 0 chr10 38092817 38093111 -102223654 + AluJo SINE Alu 1 294 -18 721 171 23 16 chr10 38093183 38093312 -102223453 + AluJo SINE Alu 1 130 -172 1076 157 15 46 chr10 38093335 38093359 -102223406 + AluJo SINE Alu 118 141 -171 2034 147 0 10 chr10 38093359 38093659 -102223106 + AluSx SINE Alu 1 297 -15 1076 157 15 46 chr10 38093659 38093831 -102222934 + AluJo SINE Alu 141 308 -4 260 176 20 0 chr10 38094670 38094721 -102222044 - MLT1J LTR MaLR -350 161 110 238 196 20 0 chr10 38094682 38094733 -102222032 - LTR67 LTR ERVL -404 153 102 * 2073 110 0 36 chr10 38095110 38095419 -102221346 + AluSx SINE Alu 1 298 -14 2175 129 0 10 chr10 38095512 38095822 -102220943 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38095845 38095866 -102220899 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38096481 38096507 -102220258 - L2 LINE L2 -10 3262 3236 1165 246 93 60 chr10 38096507 38097044 -102219721 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38097044 38097099 -102219666 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38097502 38097822 -102218943 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38097847 38097927 -102218838 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38098910 38099200 -102217565 - AluSx SINE Alu -21 291 1 759 100 0 0 chr10 38099384 38099494 -102217271 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 1638 149 7 64 chr10 38099510 38099805 -102216960 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38100462 38100493 -102216272 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38100502 38100733 -102216032 - MLT1L LTR MaLR -9 606 369 531 241 60 98 chr10 38100746 38100966 -102215799 - MLT1L LTR MaLR -360 255 45 1685 195 0 7 chr10 38100966 38101294 -102215471 + AluJo SINE Alu 1 312 0 531 241 60 98 chr10 38101294 38101338 -102215427 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38101426 38101732 -102215033 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38101959 38102100 -102214665 - L1ME LINE L1 -355 5878 5736 319 61 0 20 chr10 38102116 38102160 -102214605 - AluSx SINE Alu 0 300 257 1600 98 0 5 chr10 38102160 38102363 -102214402 - AluSx SINE Alu -110 202 1 341 303 93 35 chr10 38102412 38102721 -102214044 - L1ME LINE L1 -570 5620 5331 2074 127 7 10 chr10 38102721 38103050 -102213715 + AluSx SINE Alu 1 312 0 341 303 93 35 chr10 38103050 38103612 -102213153 - L1ME LINE L1 -859 5331 4698 342 224 26 35 chr10 38103644 38103760 -102213005 - L1ME LINE L1 -2847 3368 3254 308 282 136 35 chr10 38103763 38104299 -102212466 - L1ME LINE L1 -3222 2993 2338 877 200 0 6 chr10 38104300 38104465 -102212300 - FRAM SINE Alu 0 40 1 2215 234 100 23 chr10 38104555 38105277 -102211488 - HsTC2 DNA Tc2 -2 1896 4 305 226 6 0 chr10 38105773 38105846 -102210919 - L1ME LINE L1 -862 1714 1598 233 292 123 0 chr10 38106105 38106235 -102210530 - L1ME LINE L1 -5941 264 119 2293 110 0 0 chr10 38106332 38106632 -102210133 - AluSx SINE Alu -12 300 1 262 242 32 0 chr10 38107108 38107170 -102209595 + L1ME LINE L1 5504 5567 -599 669 268 129 44 chr10 38107185 38107457 -102209308 - MLT1H LTR MaLR -3 546 252 236 30 30 0 chr10 38107481 38107514 -102209251 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1608 145 86 143 chr10 38107638 38108092 -102208673 + MSTA LTR MaLR 1 428 0 1803 146 0 31 chr10 38109399 38109752 -102207013 + AluJb SINE Alu 1 344 0 243 0 0 0 chr10 38109892 38109919 -102206846 + (CA)n Simple_repeat Simple_repeat 1 27 0 645 144 0 0 chr10 38112522 38112612 -102204153 - AluJb SINE Alu -20 292 203 27 112 0 0 chr10 38112668 38112793 -102203972 + AT_rich Low_complexity Low_complexity 1 125 0 733 251 76 63 chr10 38112815 38113197 -102203568 - L1ME4a LINE L1 -84 6037 5651 245 325 61 0 chr10 38113519 38113633 -102203132 + MIR SINE MIR 72 192 -70 211 292 7 56 chr10 38113947 38114091 -102202674 + L2 LINE L2 2919 3055 -258 537 220 15 15 chr10 38114138 38114270 -102202495 + MIR SINE MIR 120 251 -11 1137 123 0 0 chr10 38114315 38114392 -102202373 + (CCA)n Simple_repeat Simple_repeat 1 256 0 1137 123 0 0 chr10 38114392 38114571 -102202194 + (CCA)n Simple_repeat Simple_repeat 1 179 0 980 159 9 8 chr10 38114599 38114953 -102201812 + (CCA)n Simple_repeat Simple_repeat 1 354 0 228 261 0 0 chr10 38114986 38115032 -102201733 + L2 LINE L2 3261 3306 -7 372 357 50 76 chr10 38115210 38115669 -102201096 + L2 LINE L2 2824 3270 -2 213 301 0 0 chr10 38116092 38116185 -102200580 + (TG)n Simple_repeat Simple_repeat 1 93 0 506 268 0 6 chr10 38116196 38116375 -102200390 + (TG)n Simple_repeat Simple_repeat 2 179 0 439 279 33 33 chr10 38116537 38116720 -102200045 + LTR16C LTR ERVL 303 485 -6 737 125 45 27 chr10 38117162 38117274 -102199491 - FLAM_A SINE Alu -18 124 11 271 250 96 115 chr10 38117366 38117722 -102199043 - L2 LINE L2 -38 3234 2886 1855 151 0 39 chr10 38118368 38118559 -102198206 - AluJo SINE Alu -13 299 123 1898 113 0 0 chr10 38118559 38118807 -102197958 + AluSc SINE Alu 41 288 -21 1855 151 0 39 chr10 38118807 38118926 -102197839 - AluJo SINE Alu -189 123 1 2262 103 3 3 chr10 38119616 38119918 -102196847 + AluSq SINE Alu 1 302 -11 1603 189 21 3 chr10 38120190 38120476 -102196289 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38120742 38120935 -102195830 + MIR SINE MIR 33 236 -26 5383 197 49 21 chr10 38121482 38122568 -102194197 - L1MCa LINE L1 -4970 1456 331 1509 173 39 33 chr10 38122568 38122874 -102193891 - AluJo SINE Alu -4 308 1 5383 197 49 21 chr10 38122874 38123012 -102193753 - L1MCa LINE L1 -6095 331 198 2134 129 0 10 chr10 38123163 38123473 -102193292 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38123496 38123517 -102193248 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38124132 38124158 -102192607 - L2 LINE L2 -10 3262 3236 1152 238 99 65 chr10 38124158 38124695 -102192070 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38124695 38124750 -102192015 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38125153 38125473 -102191292 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38125498 38125578 -102191187 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38126557 38126847 -102189918 - AluSx SINE Alu -21 291 1 831 93 0 0 chr10 38127031 38127149 -102189616 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 1638 149 7 64 chr10 38127165 38127460 -102189305 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38128117 38128148 -102188617 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38128157 38128388 -102188377 - MLT1L LTR MaLR -9 606 369 563 245 53 91 chr10 38128401 38128621 -102188144 - MLT1L LTR MaLR -360 255 45 1712 192 0 7 chr10 38128621 38128949 -102187816 + AluJo SINE Alu 1 312 0 563 245 53 91 chr10 38128949 38128993 -102187772 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38129081 38129387 -102187378 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38129614 38129755 -102187010 - L1ME LINE L1 -355 5809 5667 308 82 0 20 chr10 38129771 38129815 -102186950 - AluSx SINE Alu 0 300 257 1600 98 0 5 chr10 38129815 38130018 -102186747 - AluSx SINE Alu -110 202 1 260 320 95 31 chr10 38130067 38130289 -102186476 - L1ME LINE L1 -570 5551 5316 2237 99 3 3 chr10 38130375 38130677 -102186088 + AluSq SINE Alu 1 302 -11 1579 192 21 3 chr10 38130949 38131235 -102185530 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38131501 38131694 -102185071 + MIR SINE MIR 33 236 -26 6099 201 46 19 chr10 38132241 38133327 -102183438 - L1MCa LINE L1 -4970 1456 322 1509 173 39 33 chr10 38133327 38133633 -102183132 - AluJo SINE Alu -4 308 1 6099 201 46 19 chr10 38133633 38133946 -102182819 - L1MCa LINE L1 -6104 322 19 2406 91 0 0 chr10 38134674 38134970 -102181795 + AluSx SINE Alu 1 296 -16 476 272 86 39 chr10 38135280 38135537 -102181228 - L1ME LINE L1 -312 5809 5541 22 94 0 0 chr10 38135598 38135662 -102181103 + AT_rich Low_complexity Low_complexity 1 64 0 9817 25 0 0 chr10 38135844 38136975 -102179790 - L1PA3 LINE L1 -920 5226 4096 7982 29 4 14 chr10 38136975 38137247 -102179518 + L1PA3 LINE L1 5214 5487 -668 2827 16 0 0 chr10 38137247 38137555 -102179210 + AluYb8 SINE Alu 1 308 -10 7982 29 4 14 chr10 38137555 38138232 -102178533 + L1PA3 LINE L1 5487 6154 -1 1598 209 51 0 chr10 38138618 38138934 -102177831 - MER2 DNA MER2_type 0 345 14 2647 139 65 5 chr10 38140628 38141045 -102175720 - L1PA16 LINE L1 -1 6165 5724 265 235 61 31 chr10 38141144 38141242 -102175523 + L1MC4 LINE L1 6615 6715 -1327 381 300 0 13 chr10 38141531 38141681 -102175084 + CT-rich Low_complexity Low_complexity 2 149 0 21 57 0 0 chr10 38142427 38142462 -102174303 + AT_rich Low_complexity Low_complexity 1 35 0 2033 129 0 0 chr10 38143960 38144279 -102172486 - AluSx SINE Alu 0 331 13 339 318 53 8 chr10 38144390 38144522 -102172243 + MIR3 SINE MIR 64 201 -7 1638 189 13 10 chr10 38145002 38145309 -102171456 + AluJb SINE Alu 1 308 -4 438 247 41 53 chr10 38145835 38146005 -102170760 - Charlie8 DNA MER1_type -2152 265 98 1618 175 0 18 chr10 38146005 38146316 -102170449 - AluJo SINE Alu 0 314 9 188 222 167 0 chr10 38146577 38146631 -102170134 - MIR SINE MIR -140 122 60 2175 115 3 13 chr10 38146786 38146921 -102169844 + AluSx SINE Alu 1 136 -176 2215 123 0 0 chr10 38146921 38147231 -102169534 + AluSq SINE Alu 1 310 -3 2175 115 3 13 chr10 38147231 38147409 -102169356 + AluSx SINE Alu 136 311 -1 235 263 35 0 chr10 38147853 38147910 -102168855 + MIR SINE MIR 194 252 -10 1889 158 0 7 chr10 38150670 38150961 -102165804 + AluJb SINE Alu 1 289 -23 1928 151 0 0 chr10 38151559 38151909 -102164856 + AluSx SINE Alu 5 354 0 346 356 52 0 chr10 38152868 38153003 -102163762 + MIR3 SINE MIR 1 142 -66 187 289 0 0 chr10 38153009 38153054 -102163711 - L2 LINE L2 0 3313 3269 2509 75 0 0 chr10 38153185 38153490 -102163275 - AluY SINE Alu -6 305 1 2134 130 3 0 chr10 38153577 38153877 -102162888 - AluSx SINE Alu -11 301 1 198 71 0 0 chr10 38154705 38154733 -102162032 + (TG)n Simple_repeat Simple_repeat 1 28 0 2061 120 0 0 chr10 38156036 38156312 -102160453 - AluSx SINE Alu -12 300 25 2027 120 7 0 chr10 38156641 38156932 -102159833 - AluSx SINE Alu -19 293 1 4617 107 6 3 chr10 38158285 38158922 -102157843 + LTR9B LTR ERV1 6 644 0 267 228 121 53 chr10 38159352 38159502 -102157263 - MIR SINE MIR -71 191 24 481 370 15 0 chr10 38159671 38159874 -102156891 - MIR SINE MIR -28 234 29 1811 161 50 56 chr10 38159965 38160141 -102156624 - L1PA16 LINE L1 -16 6150 5975 1762 168 35 0 chr10 38160141 38160426 -102156339 - AluJo SINE Alu -17 295 1 1811 161 50 56 chr10 38160426 38160609 -102156156 - L1PA16 LINE L1 -191 5975 5793 1452 150 19 0 chr10 38160906 38161166 -102155599 - L1MA4 LINE L1 0 6300 6036 379 283 9 6 chr10 38161953 38162306 -102154459 + (CA)n Simple_repeat Simple_repeat 1 354 0 497 201 13 13 chr10 38162980 38163139 -102153626 + (TG)n Simple_repeat Simple_repeat 2 160 0 520 276 45 0 chr10 38163693 38163849 -102152916 - MIR SINE MIR -19 243 81 3158 123 2 0 chr10 38164488 38164934 -102151831 - L1PA13 LINE L1 -2 6161 5715 423 309 66 51 chr10 38164940 38165542 -102151223 - L1MDa LINE L1 -842 1648 1012 1922 132 0 21 chr10 38166440 38166767 -102149998 + AluSx SINE Alu 1 321 0 186 359 145 19 chr10 38166858 38167120 -102149645 + L2 LINE L2 2084 2378 -936 1586 93 6 0 chr10 38167311 38167666 -102149099 - L1PB2 LINE L1 -2 6149 5717 729 169 121 61 chr10 38167667 38167898 -102148867 - ORSL DNA AcHobo -1 274 30 2395 111 44 39 chr10 38168044 38168406 -102148359 - THE1B LTR MaLR 0 364 1 293 246 0 0 chr10 38168422 38168483 -102148282 - Tigger5 DNA MER2_type 0 2323 2263 280 155 17 69 chr10 38168503 38168561 -102148204 - Tigger5 DNA MER2_type -2268 55 1 240 226 16 0 chr10 38170504 38170566 -102146199 + CT-rich Low_complexity Low_complexity 2 64 0 189 74 0 0 chr10 38170635 38170662 -102146103 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1572 152 14 45 chr10 38170888 38171200 -102145565 - AluJb SINE Alu 0 312 11 1000 251 91 52 chr10 38172031 38172469 -102144296 + MLT1J LTR MaLR 1 455 -56 4167 186 35 8 chr10 38172582 38173666 -102143099 + L1MD2 LINE L1 4883 5992 -250 252 62 0 0 chr10 38173671 38173703 -102143062 - MLT2B1 LTR ERVL 0 520 489 351 78 0 0 chr10 38173706 38173757 -102143008 + (CA)n Simple_repeat Simple_repeat 2 52 0 362 166 11 57 chr10 38173782 38173932 -102142833 + GA-rich Low_complexity Low_complexity 2 144 -24 297 51 0 0 chr10 38173932 38173971 -102142794 + (CA)n Simple_repeat Simple_repeat 2 40 0 362 166 11 57 chr10 38173971 38173995 -102142770 + GA-rich Low_complexity Low_complexity 144 168 0 268 191 0 0 chr10 38174031 38174073 -102142692 - MLT2B1 LTR ERVL -118 402 361 2417 68 3 0 chr10 38174092 38174387 -102142378 + AluY SINE Alu 1 296 -15 1885 124 11 11 chr10 38174488 38174771 -102141994 - AluSx SINE Alu -29 283 1 1544 204 35 9 chr10 38174788 38175107 -102141658 - MLT2B1 LTR ERVL -193 327 1 261 50 100 0 chr10 38175123 38175163 -102141602 + L1MC/D LINE L1 5403 5446 -724 1224 222 29 52 chr10 38175174 38175453 -102141312 + L1MD2 LINE L1 6022 6293 -66 2204 121 3 3 chr10 38175453 38175760 -102141005 - AluSq SINE Alu -6 307 1 1224 222 29 52 chr10 38175760 38175823 -102140942 + L1MD2 LINE L1 6293 6356 -3 2471 99 11 62 chr10 38176181 38176555 -102140210 - THE1A LTR MaLR 0 355 1 926 269 118 26 chr10 38177225 38177642 -102139123 + L2 LINE L2 1776 2230 -1084 381 179 51 0 chr10 38177755 38177833 -102138932 - MER20 DNA MER1_type -3 216 135 317 197 28 22 chr10 38177873 38178051 -102138714 + (ATATG)n Simple_repeat Simple_repeat 2 180 0 243 0 0 0 chr10 38178105 38178132 -102138633 + (ATAGG)n Simple_repeat Simple_repeat 4 30 0 842 172 21 0 chr10 38178132 38178277 -102138488 - MER20 DNA MER1_type -71 148 1 468 77 0 0 chr10 38179781 38179846 -102136919 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 2071 125 20 0 chr10 38179846 38180143 -102136622 - AluSx SINE Alu -9 303 1 857 236 16 0 chr10 38180181 38180372 -102136393 - L1PA16 LINE L1 -16 6150 5957 820 177 0 7 chr10 38180399 38180540 -102136225 - AluJb SINE Alu 0 312 173 324 329 40 27 chr10 38180881 38181030 -102135735 + MIR3 SINE MIR 48 198 -10 1915 156 0 13 chr10 38182354 38182656 -102134109 + AluJb SINE Alu 1 298 -14 2060 127 6 19 chr10 38182758 38183072 -102133693 + AluSx SINE Alu 1 310 -2 1868 174 0 7 chr10 38183320 38183624 -102133141 + AluJo SINE Alu 1 302 -10 408 308 55 16 chr10 38183651 38183833 -102132932 - MLT1J2 LTR MaLR -21 429 241 248 272 88 35 chr10 38183987 38184101 -102132664 + MLT1L LTR MaLR 225 344 -271 1118 149 64 0 chr10 38184101 38184289 -102132476 + MSTA LTR MaLR 211 410 -18 185 194 0 0 chr10 38185481 38185517 -102131248 - L2 LINE L2 0 3313 3278 2249 110 3 0 chr10 38185675 38185984 -102130781 + AluSx SINE Alu 1 310 -2 285 358 68 38 chr10 38185996 38186384 -102130381 - L2 LINE L2 -226 3046 2635 555 285 18 24 chr10 38186401 38186566 -102130199 + MER20 DNA MER1_type 56 219 0 233 356 144 17 chr10 38186902 38187020 -102129745 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 38187114 38187136 -102129629 + AT_rich Low_complexity Low_complexity 1 22 0 274 75 75 0 chr10 38187156 38187223 -102129542 + (TA)n Simple_repeat Simple_repeat 1 72 0 21 71 0 0 chr10 38187311 38187353 -102129412 + AT_rich Low_complexity Low_complexity 1 42 0 264 159 68 6 chr10 38187364 38187527 -102129238 + (TA)n Simple_repeat Simple_repeat 1 173 0 31 0 0 0 chr10 38187527 38187558 -102129207 + AT_rich Low_complexity Low_complexity 1 31 0 2419 62 0 7 chr10 38187579 38187884 -102128881 + AluY SINE Alu 1 303 -8 2144 154 35 27 chr10 38187884 38188085 -102128680 - MLT1B LTR MaLR -9 381 174 772 204 80 12 chr10 38188085 38188247 -102128518 - FAM SINE Alu -2 173 1 2144 154 35 27 chr10 38188247 38188421 -102128344 - MLT1B LTR MaLR -216 174 3 25 31 0 0 chr10 38190510 38190542 -102126223 + AT_rich Low_complexity Low_complexity 1 32 0 1845 112 53 40 chr10 38190566 38190869 -102125896 - AluSx SINE Alu -5 307 1 337 239 34 48 chr10 38191028 38191237 -102125528 - L1M4c LINE L1 -2859 3523 3318 3863 219 50 18 chr10 38191270 38192839 -102123926 - L1MB7 LINE L1 -17 6665 5051 2091 244 85 30 chr10 38192836 38193704 -102123061 - L1MB7 LINE L1 -4835 1707 870 * 280 302 152 15 chr10 38194481 38194880 -102121885 - L1M4c LINE L1 -860 1883 1279 807 180 0 0 chr10 38194904 38195026 -102121739 - FLAM_C SINE Alu -20 123 2 898 193 33 52 chr10 38195059 38195271 -102121494 + MER20 DNA MER1_type 6 213 -6 2372 155 11 16 chr10 38195663 38196030 -102120735 - MLT1A1 LTR MaLR 0 365 1 1993 210 47 31 chr10 38196040 38196464 -102120301 - MLT1A1-int LTR MaLR -11 1724 1294 3027 238 145 26 chr10 38196489 38197525 -102119240 - MLT1A1-int LTR MaLR -576 1159 1 1866 194 26 12 chr10 38197527 38197873 -102118892 - MLT1A1 LTR MaLR -4 361 11 1861 163 3 26 chr10 38198478 38198791 -102117974 - AluJo SINE Alu -6 306 1 181 401 23 8 chr10 38199059 38199191 -102117574 + L2 LINE L2 3172 3305 -8 180 385 0 0 chr10 38199353 38199418 -102117347 - MIR3 SINE MIR 0 208 144 530 233 70 108 chr10 38199419 38199806 -102116959 - MLT1J LTR MaLR -2 509 138 297 358 37 31 chr10 38199964 38200126 -102116639 - L2 LINE L2 -609 2705 2543 204 129 16 97 chr10 38200273 38200335 -102116430 + T-rich Low_complexity Low_complexity 1 57 0 2183 116 0 0 chr10 38200962 38201351 -102115414 - AluSx SINE Alu 0 389 1 269 231 132 44 chr10 38202481 38202572 -102114193 - MIR3 SINE MIR -29 179 81 784 294 119 49 chr10 38202755 38203207 -102113558 + MLT1K LTR MaLR 97 580 -8 267 320 13 80 chr10 38203663 38203813 -102112952 + MIR SINE MIR 120 259 -3 1891 157 0 7 chr10 38204473 38204772 -102111993 + AluJb SINE Alu 1 297 -15 2137 93 28 7 chr10 38204773 38205064 -102111701 + AluSq SINE Alu 9 305 -8 1323 154 55 18 chr10 38206304 38206577 -102110188 + AluJo SINE Alu 4 286 -26 198 299 31 62 chr10 38206634 38206731 -102110034 - L2 LINE L2 -181 3091 2998 1494 155 81 15 chr10 38206767 38206871 -102109894 + AluJo SINE Alu 17 113 -199 189 0 0 0 chr10 38206871 38206892 -102109873 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1494 155 81 15 chr10 38206892 38207058 -102109707 + AluJo SINE Alu 113 305 -7 2274 105 3 0 chr10 38207871 38208166 -102108599 - AluSq SINE Alu -17 296 1 1639 187 13 16 chr10 38208808 38209113 -102107652 - AluJo SINE Alu -8 304 1 396 269 69 0 chr10 38209703 38209833 -102106932 + LTR33A LTR ERVL 362 500 -23 22 0 0 0 chr10 38210032 38210054 -102106711 + AT_rich Low_complexity Low_complexity 1 22 0 447 176 24 0 chr10 38210054 38210139 -102106626 - L1MA2 LINE L1 0 6304 6218 426 267 0 0 chr10 38210140 38210241 -102106524 + L1 LINE L1 2538 2638 -3508 1385 96 5 5 chr10 38210315 38210503 -102106262 - AluY SINE Alu -21 290 103 538 149 107 17 chr10 38211630 38211779 -102104986 + L1MA5 LINE L1 5980 6139 -161 3131 141 26 8 chr10 38211781 38212278 -102104487 - L1PA15 LINE L1 -5 6160 5655 838 183 0 0 chr10 38212278 38212440 -102104325 + L1MA5A LINE L1 6134 6297 0 1812 140 24 24 chr10 38214558 38214850 -102101915 - AluJo SINE Alu -15 297 6 297 217 72 0 chr10 38215094 38215163 -102101602 - L1ME3 LINE L1 0 6162 6089 189 0 0 0 chr10 38216569 38216590 -102100175 + (T)n Simple_repeat Simple_repeat 1 21 0 403 333 39 107 chr10 38216631 38217088 -102099677 + L2 LINE L2 2807 3232 -40 2200 112 0 3 chr10 38219998 38220294 -102096471 - AluSg SINE Alu -15 295 1 21 0 0 0 chr10 38220994 38221015 -102095750 + AT_rich Low_complexity Low_complexity 1 21 0 536 179 154 100 chr10 38221146 38221252 -102095513 - MER69 DNA AcHobo -7 2519 2420 647 239 31 6 chr10 38221252 38221411 -102095354 - FAM SINE Alu -12 163 1 536 179 154 100 chr10 38221411 38221544 -102095221 - MER69 DNA AcHobo -106 2420 2267 1273 279 107 0 chr10 38221556 38221986 -102094779 - MER69 DNA AcHobo -641 585 110 1937 174 14 0 chr10 38221992 38222337 -102094428 + L1PA16 LINE L1 5690 6039 -127 769 140 0 0 chr10 38222337 38222444 -102094321 + AluSp SINE Alu 1 107 -206 1133 145 28 0 chr10 38222579 38222814 -102093951 + AluSg/x SINE Alu 100 339 0 698 130 37 0 chr10 38222816 38222924 -102093841 + L1PA16 LINE L1 6046 6157 -9 416 202 0 21 chr10 38223897 38223991 -102092774 - AluS SINE Alu 0 312 221 469 319 96 15 chr10 38224134 38224542 -102092223 - L1ME LINE L1 -375 5795 5356 1753 118 12 87 chr10 38224941 38225263 -102091502 - AluSx SINE Alu -14 298 1 22 35 0 0 chr10 38226125 38226154 -102090611 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 38226470 38226492 -102090273 + AT_rich Low_complexity Low_complexity 1 22 0 1911 185 30 3 chr10 38227528 38227863 -102088902 - MER2 DNA MER2_type 0 344 1 591 283 15 87 chr10 38228157 38228312 -102088453 + MIR SINE MIR 12 142 -120 2674 141 28 23 chr10 38228312 38228744 -102088021 - Tigger2a DNA MER2_type 0 434 1 591 283 15 87 chr10 38228744 38228853 -102087912 + MIR SINE MIR 142 257 -5 228 67 0 0 chr10 38229397 38229427 -102087338 + (TG)n Simple_repeat Simple_repeat 2 31 0 5068 133 69 48 chr10 38230199 38230894 -102085871 - L1MC1 LINE L1 -9 6324 5604 2194 129 3 0 chr10 38230894 38231197 -102085568 - AluSx SINE Alu -8 304 1 5068 133 69 48 chr10 38231197 38231399 -102085366 - L1MC1 LINE L1 -729 5604 5408 416 288 279 18 chr10 38231595 38231928 -102084837 - L2 LINE L2 0 3272 2853 708 296 117 0 chr10 38232131 38232354 -102084411 + MIR SINE MIR 13 261 -1 1602 149 71 29 chr10 38232375 38232656 -102084109 - AluJo SINE Alu -19 293 1 369 325 76 6 chr10 38232732 38232889 -102083876 - MIR SINE MIR -73 189 22 14913 147 30 39 chr10 38233125 38235565 -102081200 - Tigger1 DNA MER2_type 0 2418 1 2101 134 0 0 chr10 38235624 38235914 -102080851 + AluSx SINE Alu 1 290 -22 1076 101 0 0 chr10 38237307 38237456 -102079309 - Tigger1 DNA MER2_type -1904 514 366 1545 218 59 35 chr10 38237471 38237752 -102079013 - MLT1C LTR MaLR 0 467 172 2111 142 0 13 chr10 38237752 38238068 -102078697 - AluSx SINE Alu 0 312 1 1545 218 59 35 chr10 38238068 38238190 -102078575 - MLT1C LTR MaLR -295 172 54 724 82 41 0 chr10 38238190 38238288 -102078477 - LTR12 LTR ERV1 -133 581 480 299 204 51 41 chr10 38238289 38238387 -102078378 - LTR30 LTR ERV1 -80 642 544 988 130 135 72 chr10 38238391 38238599 -102078166 - LTR12 LTR ERV1 -441 273 53 258 250 0 0 chr10 38238599 38238651 -102078114 - LTR30 LTR ERV1 -670 52 1 235 100 33 150 chr10 38238653 38238713 -102078052 - MLT1B LTR MaLR -336 54 2 1688 202 69 9 chr10 38238819 38239255 -102077510 + L1 LINE L1 3132 3593 -2553 2064 198 22 3 chr10 38239399 38239757 -102077008 + MLT1A1 LTR MaLR 1 365 0 2016 135 3 35 chr10 38240821 38240963 -102075802 + AluJo SINE Alu 1 146 -166 2220 89 0 54 chr10 38240963 38241276 -102075489 + AluY SINE Alu 1 296 -15 2016 135 3 35 chr10 38241276 38241452 -102075313 + AluJo SINE Alu 146 309 -3 928 176 0 0 chr10 38243360 38243525 -102073240 + L1MA4 LINE L1 6136 6300 0 598 321 149 28 chr10 38243555 38244057 -102072708 + L2 LINE L2 372 934 -2380 492 277 125 35 chr10 38244058 38244347 -102072418 + L2 LINE L2 1152 1466 -1848 6389 113 6 1 chr10 38244347 38245226 -102071539 - THE1B-int LTR MaLR -697 883 1 2218 140 50 34 chr10 38245226 38245584 -102071181 - THE1B LTR MaLR 0 364 1 1883 173 61 6 chr10 38245687 38246029 -102070736 - MLT1A1 LTR MaLR -4 361 1 564 153 12 0 chr10 38246275 38246360 -102070405 - Tigger7 DNA MER2_type -1 2490 2405 1208 197 120 58 chr10 38246362 38246515 -102070250 + MER2 DNA MER2_type 1 143 -202 2288 130 39 33 chr10 38246515 38246877 -102069888 + THE1B LTR MaLR 1 364 0 1208 197 120 58 chr10 38246877 38247048 -102069717 + MER2 DNA MER2_type 143 345 0 855 93 0 7 chr10 38247050 38247190 -102069575 - Tigger7 DNA MER2_type -87 2500 2362 594 238 16 8 chr10 38247412 38247538 -102069227 - L2 LINE L2 -1809 1505 1379 367 300 65 102 chr10 38247626 38247886 -102068879 + L2 LINE L2 2827 3064 -208 2510 150 30 30 chr10 38247886 38248312 -102068453 + MSTB LTR MaLR 1 426 0 367 300 65 102 chr10 38248312 38248514 -102068251 + L2 LINE L2 3064 3272 0 222 279 164 49 chr10 38250695 38250939 -102065826 - L3b LINE CR1 -92 1491 1220 2108 121 0 23 chr10 38251143 38251450 -102065315 - AluSq SINE Alu -13 300 1 654 168 0 0 chr10 38251602 38251703 -102065062 + AluJ/FLAM SINE Alu 2 102 -210 373 100 0 0 chr10 38251984 38252034 -102064731 + Alu SINE Alu 1 50 -250 911 209 0 0 chr10 38252352 38252510 -102064255 + FRAM SINE Alu 1 157 -19 21 36 0 0 chr10 38252514 38252542 -102064223 + AT_rich Low_complexity Low_complexity 1 28 0 344 303 110 26 chr10 38253990 38254145 -102062620 - MIR SINE MIR -92 170 3 1887 163 0 3 chr10 38254375 38254670 -102062095 - AluJo SINE Alu -18 294 1 352 298 107 0 chr10 38255896 38256017 -102060748 - MIR3 SINE MIR -22 186 53 2203 106 19 13 chr10 38256489 38256800 -102059965 + AluSq SINE Alu 1 313 0 326 277 26 26 chr10 38259553 38259708 -102057057 - L1MC4a LINE L1 -1845 5963 5809 778 312 70 19 chr10 38260067 38260596 -102056169 - HAL1 LINE L1 -794 1713 1158 450 248 9 18 chr10 38260597 38260710 -102056055 + L2 LINE L2 3194 3305 -8 528 223 100 92 chr10 38260716 38260967 -102055798 - HAL1 LINE L1 -1351 1156 904 287 288 14 50 chr10 38260977 38261116 -102055649 - HAL1 LINE L1 -1714 793 660 25 51 0 0 chr10 38262067 38262106 -102054659 + AT_rich Low_complexity Low_complexity 1 39 0 276 270 200 0 chr10 38262106 38262306 -102054459 - L1ME4a LINE L1 -1 6120 5881 2071 106 3 43 chr10 38262321 38262643 -102054122 + AluSc SINE Alu 1 309 0 261 301 52 23 chr10 38262762 38262935 -102053830 - L1ME4a LINE L1 -1018 5128 4951 962 150 6 6 chr10 38263135 38263295 -102053470 - FRAM SINE Alu -9 167 8 223 315 43 11 chr10 38263498 38263590 -102053175 + MIR SINE MIR 58 152 -110 2015 98 98 0 chr10 38263905 38264182 -102052583 + AluSx SINE Alu 1 304 -8 876 215 0 0 chr10 38264746 38264904 -102051861 + AluJb SINE Alu 137 294 -18 552 179 0 0 chr10 38264936 38265048 -102051717 + GA-rich Low_complexity Low_complexity 3 114 0 359 330 17 0 chr10 38265358 38265493 -102051272 + MIR SINE MIR 21 157 -68 635 274 74 16 chr10 38265650 38265840 -102050925 + MIR SINE MIR 41 241 -21 471 302 124 70 chr10 38266193 38266573 -102050192 + L2 LINE L2 1798 2221 -1093 1188 220 5 0 chr10 38266573 38266791 -102049974 - MER58A DNA MER1_type -3 221 3 471 302 124 70 chr10 38266791 38266992 -102049773 + L2 LINE L2 2221 2410 -904 454 271 82 0 chr10 38267054 38267176 -102049589 + MIR SINE MIR 25 156 -106 543 325 94 39 chr10 38267236 38267704 -102049061 + L2 LINE L2 2467 2960 -354 446 271 28 0 chr10 38268675 38268782 -102047983 - L2 LINE L2 0 3313 3204 951 154 0 146 chr10 38268844 38269084 -102047681 - MER3 DNA MER1_type -4 205 1 872 159 8 0 chr10 38269697 38269829 -102046936 + FLAM_C SINE Alu 1 133 0 323 231 160 59 chr10 38270067 38270236 -102046529 + MIR3 SINE MIR 13 198 -10 2948 98 0 3 chr10 38270460 38270836 -102045929 + THE1C LTR MaLR 1 375 0 1560 185 0 38 chr10 38271085 38271404 -102045361 - AluJo SINE Alu -5 307 1 426 251 11 6 chr10 38272306 38272481 -102044284 + (CA)n Simple_repeat Simple_repeat 2 177 0 450 0 0 0 chr10 38272610 38272660 -102044105 + (TG)n Simple_repeat Simple_repeat 1 50 0 407 59 0 0 chr10 38273560 38273611 -102043154 - MADE1 DNA Mariner -5 75 25 4239 36 2 0 chr10 38273611 38274106 -102042659 - L1PA5 LINE L1 -1704 4442 3947 8292 37 1 1 chr10 38274106 38275821 -102040944 + L1PA5 LINE L1 4439 6154 0 327 50 0 0 chr10 38275821 38275861 -102040904 - MADE1 DNA Mariner -40 40 1 1979 161 34 10 chr10 38276368 38276778 -102039987 - L1 LINE L1 -1481 4665 4246 239 356 150 28 chr10 38276874 38277121 -102039644 - L2 LINE L2 -3 3269 2993 849 167 0 0 chr10 38277316 38277529 -102039236 + (TG)n Simple_repeat Simple_repeat 1 213 0 404 315 5 79 chr10 38278812 38279028 -102037737 - MIR SINE MIR -43 219 20 224 235 15 73 chr10 38280298 38280366 -102036399 - L2 LINE L2 -1 3271 3208 1501 188 21 73 chr10 38280474 38280910 -102035855 + MLT1F LTR MaLR 130 542 0 205 353 66 22 chr10 38280917 38281053 -102035712 - L2 LINE L2 -31 3282 3141 243 273 63 77 chr10 38281490 38281633 -102035132 - L2 LINE L2 -9 3304 3164 686 228 76 84 chr10 38281699 38281962 -102034803 - MIR SINE MIR 0 262 2 1953 160 13 0 chr10 38282151 38282451 -102034314 + AluJo SINE Alu 1 304 -8 236 221 70 35 chr10 38282635 38282721 -102034044 + MIR SINE MIR 45 133 -75 22 56 0 0 chr10 38283510 38283546 -102033219 + AT_rich Low_complexity Low_complexity 1 36 0 2174 152 33 30 chr10 38283568 38283931 -102032834 - THE1B LTR MaLR 0 364 1 299 339 36 18 chr10 38283984 38284096 -102032669 - L2 LINE L2 -21 3251 3138 2441 118 113 13 chr10 38284260 38284649 -102032116 - MSTA LTR MaLR 0 428 1 317 268 29 80 chr10 38286526 38286664 -102030101 - MIR SINE MIR -113 149 19 318 343 57 11 chr10 38287334 38287509 -102029256 - MIR SINE MIR -53 209 27 360 0 0 0 chr10 38287531 38287571 -102029194 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1149 69 29 0 chr10 38287571 38287746 -102029019 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 345 160 11 32 chr10 38287749 38287843 -102028922 + CT-rich Low_complexity Low_complexity 1 92 0 824 182 0 0 chr10 38287843 38287975 -102028790 - FRAM SINE Alu -25 151 20 337 179 24 5 chr10 38287987 38288072 -102028693 - L1P4 LINE L1 -370 5781 5693 470 295 60 7 chr10 38288649 38288798 -102027967 - MER69A DNA AcHobo -19 158 2 22 0 0 0 chr10 38289357 38289379 -102027386 + AT_rich Low_complexity Low_complexity 1 22 0 1445 158 0 0 chr10 38289441 38289656 -102027109 - AluSg/x SINE Alu -13 297 83 3234 161 19 3 chr10 38289656 38290220 -102026545 - L1MB3 LINE L1 -32 6151 5579 2154 152 128 8 chr10 38290288 38290670 -102026095 - MSTA LTR MaLR 0 428 1 204 111 0 0 chr10 38290890 38290926 -102025839 + (T)n Simple_repeat Simple_repeat 1 36 0 39 0 0 0 chr10 38291216 38291255 -102025510 + AT_rich Low_complexity Low_complexity 1 39 0 1526 196 7 0 chr10 38291258 38291538 -102025227 - AluJo SINE Alu -30 282 1 1341 203 3 38 chr10 38291879 38292000 -102024765 + AluJo SINE Alu 2 126 -186 2314 86 0 3 chr10 38292000 38292292 -102024473 - AluSc SINE Alu -18 291 1 1341 203 3 38 chr10 38292292 38292460 -102024305 + AluJo SINE Alu 126 281 -31 186 354 50 62 chr10 38293877 38293942 -102022823 + MIR SINE MIR 34 98 -164 1488 169 9 91 chr10 38293942 38294116 -102022649 - AluJo SINE Alu -18 294 156 2213 132 0 0 chr10 38294116 38294412 -102022353 - AluSq SINE Alu -17 296 1 1488 169 9 91 chr10 38294412 38294557 -102022208 - AluJo SINE Alu -156 156 1 186 354 50 62 chr10 38294557 38294652 -102022113 + MIR SINE MIR 98 192 -70 487 320 91 67 chr10 38294998 38295132 -102021633 - L2 LINE L2 -11 3302 3173 2261 127 0 0 chr10 38295132 38295439 -102021326 + AluSx SINE Alu 1 307 -5 487 320 91 67 chr10 38295439 38295676 -102021089 - L2 LINE L2 -140 3173 2922 966 180 0 0 chr10 38296711 38296872 -102019893 - FRAM SINE Alu -12 164 4 5802 119 23 11 chr10 38296872 38298417 -102018348 - L1MA3 LINE L1 -157 6148 4585 375 230 0 8 chr10 38298488 38298580 -102018185 + L1MC1 LINE L1 5678 5765 -356 7723 233 28 7 chr10 38298607 38300577 -102016188 - L1M4 LINE L1 -1069 5077 3074 30 27 0 0 chr10 38300594 38300631 -102016134 + AT_rich Low_complexity Low_complexity 1 37 0 260 172 0 47 chr10 38300637 38300701 -102016064 + L1MC1 LINE L1 5958 6018 -315 * 2484 159 43 50 chr10 38300693 38301365 -102015400 - L1MCa LINE L1 -4589 1837 1087 563 223 41 99 chr10 38301372 38301664 -102015101 + L1MC5 LINE L1 7657 7931 -30 250 277 96 12 chr10 38302587 38302670 -102014095 + MIR SINE MIR 3 92 -170 1154 174 28 9 chr10 38302716 38302928 -102013837 - Tigger1 DNA MER2_type -1 2417 2202 813 190 0 21 chr10 38302910 38303052 -102013713 - Tigger1 DNA MER2_type -2256 162 24 * 1395 176 0 62 chr10 38303061 38303367 -102013398 - L1MA7 LINE L1 -32 6259 5973 250 318 205 0 chr10 38303368 38303519 -102013246 + MIR SINE MIR 78 259 -3 1544 171 16 68 chr10 38303646 38303819 -102012946 - AluJo SINE Alu -7 305 155 2283 110 3 0 chr10 38303819 38304118 -102012647 - AluSx SINE Alu -12 300 1 1544 171 16 68 chr10 38304118 38304266 -102012499 - AluJo SINE Alu -157 155 1 2259 115 0 0 chr10 38304270 38304586 -102012179 - AluSx SINE Alu 0 316 1 229 276 181 9 chr10 38304606 38304722 -102012043 + L2 LINE L2 3178 3313 0 186 103 0 0 chr10 38307589 38307618 -102009147 + (T)n Simple_repeat Simple_repeat 1 29 0 294 287 223 25 chr10 38308534 38308736 -102008029 + L3 LINE CR1 517 758 -819 337 321 113 13 chr10 38308877 38309036 -102007729 + MIR SINE MIR 46 220 -42 619 193 37 0 chr10 38309120 38309255 -102007510 + FLAM_C SINE Alu 7 145 0 427 357 67 20 chr10 38309314 38309670 -102007095 + L3 LINE CR1 829 1201 -376 210 37 0 0 chr10 38309720 38309747 -102007018 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1287 146 0 119 chr10 38309756 38310024 -102006741 - AluJb SINE Alu -48 264 29 1878 224 43 14 chr10 38310065 38310551 -102006214 - MER74B LTR ERVL -67 555 56 369 311 105 31 chr10 38310564 38310821 -102005944 + L3 LINE CR1 1301 1576 -1 189 0 0 0 chr10 38311237 38311258 -102005507 + (T)n Simple_repeat Simple_repeat 1 21 0 324 239 11 23 chr10 38311352 38311440 -102005325 + MIR3 SINE MIR 119 205 -3 224 333 62 0 chr10 38311584 38311665 -102005100 - MIR SINE MIR -118 144 59 2352 88 0 22 chr10 38312083 38312401 -102004364 - AluY SINE Alu 0 311 1 991 168 0 0 chr10 38312421 38312582 -102004183 - L1MA3 LINE L1 -4 6301 6141 538 260 13 27 chr10 38313401 38313551 -102003214 + MIR SINE MIR 115 262 0 238 284 0 0 chr10 38313700 38313774 -102002991 + (TG)n Simple_repeat Simple_repeat 2 75 0 1188 205 3 48 chr10 38314518 38314686 -102002079 - AluJo SINE Alu -31 281 130 2328 82 0 3 chr10 38314686 38314978 -102001787 + AluSc SINE Alu 1 291 -18 1188 205 3 48 chr10 38314978 38315102 -102001663 - AluJo SINE Alu -182 130 2 1542 196 7 0 chr10 38315443 38315723 -102001042 + AluJo SINE Alu 1 282 -30 203 0 0 36 chr10 38315732 38315760 -102001005 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 238 284 0 0 chr10 38316357 38316431 -102000334 + (CA)n Simple_repeat Simple_repeat 2 75 0 538 260 13 27 chr10 38316580 38316730 -102000035 - MIR SINE MIR 0 262 115 254 307 32 0 chr10 38316758 38316898 -101999867 + CT-rich Low_complexity Low_complexity 1 144 0 402 337 72 66 chr10 38316902 38317237 -101999528 - L2 LINE L2 -17 3255 2919 478 262 96 44 chr10 38317469 38317877 -101998888 - L1M4 LINE L1 -915 5231 4803 344 281 117 39 chr10 38317950 38318335 -101998430 - L1M4 LINE L1 -1459 4687 4273 2513 258 45 49 chr10 38318371 38319308 -101997457 + L1ME LINE L1 6 938 -5132 43623 35 22 1 chr10 38319348 38325376 -101991389 + L1PA3 LINE L1 1 6155 0 1423 266 53 67 chr10 38325369 38325567 -101991198 + L1ME LINE L1 970 1169 -5092 * 1720 165 53 3 chr10 38325567 38325852 -101990913 + AluJb SINE Alu 2 300 -12 1423 266 53 67 chr10 38325852 38326555 -101990210 + L1ME LINE L1 1169 1859 -4402 598 269 78 95 chr10 38326582 38326849 -101989916 - L1M4 LINE L1 -1899 4247 3977 5436 45 0 0 chr10 38326849 38327495 -101989270 + L1PA5 LINE L1 5522 6167 0 598 269 78 95 chr10 38327495 38327561 -101989204 - L1M4 LINE L1 -2169 3977 3911 2447 88 0 0 chr10 38327561 38327869 -101988896 - AluSx SINE Alu -4 308 1 598 269 78 95 chr10 38327869 38328356 -101988409 - L1M4 LINE L1 -2235 3911 3439 300 123 123 0 chr10 38328372 38328453 -101988312 + MSTA LTR MaLR 6 96 -332 488 264 77 79 chr10 38328663 38329167 -101987598 - L1MDa LINE L1 -2220 4320 3818 868 82 8 0 chr10 38329167 38329289 -101987476 + MSTA LTR MaLR 1 123 -305 526 291 113 25 chr10 38329329 38330044 -101986721 - L1MDa LINE L1 -2719 3821 3044 402 206 61 92 chr10 38330152 38330290 -101986475 - L1MDa LINE L1 -3794 2746 2605 216 0 0 0 chr10 38330290 38330314 -101986451 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1481 173 11 29 chr10 38330317 38330595 -101986170 - AluJo SINE Alu -31 281 9 402 206 61 92 chr10 38330595 38330680 -101986085 - L1MDa LINE L1 -3937 2603 2526 2180 142 0 0 chr10 38330704 38331015 -101985750 - AluSx SINE Alu -1 311 1 860 275 82 46 chr10 38331429 38331890 -101984875 - L1MDa LINE L1 -892 2009 1585 180 278 19 0 chr10 38332883 38332937 -101983828 - L2 LINE L2 -573 2741 2687 1695 172 14 10 chr10 38332937 38333234 -101983531 + AluJo SINE Alu 1 298 -14 606 28 0 0 chr10 38333637 38333709 -101983056 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 3076 77 3 0 chr10 38335008 38335371 -101981394 + THE1B LTR MaLR 1 364 0 189 147 88 0 chr10 38337428 38337462 -101979303 - L2 LINE L2 -13 3300 3264 * 387 219 130 16 chr10 38337436 38337559 -101979206 - MIR SINE MIR -15 247 111 409 189 154 35 chr10 38338241 38338384 -101978381 + L2 LINE L2 3108 3267 -46 329 171 0 14 chr10 38338402 38338472 -101978293 + (TG)n Simple_repeat Simple_repeat 2 70 0 2050 161 0 0 chr10 38338511 38338815 -101977950 - AluSq SINE Alu -9 304 1 1749 145 17 14 chr10 38338885 38339175 -101977590 + MER47A DNA MER2_type 76 366 0 227 359 0 0 chr10 38339617 38339745 -101977020 - L1M4 LINE L1 -3072 3074 2947 1114 140 11 0 chr10 38339748 38339934 -101976831 - L1MA5 LINE L1 -1 6299 6112 2292 107 0 19 chr10 38339936 38340245 -101976520 + AluSq SINE Alu 1 303 -10 4777 89 5 2 chr10 38340257 38340507 -101976258 + L1PB1 LINE L1 5531 5779 -372 234 0 0 0 chr10 38340507 38340533 -101976232 + (TA)n Simple_repeat Simple_repeat 1 26 0 4777 89 5 2 chr10 38340533 38340899 -101975866 + L1PB1 LINE L1 5779 6149 -2 337 285 81 99 chr10 38340940 38341386 -101975379 - L1M4 LINE L1 -3169 2977 2540 1684 188 3 26 chr10 38342392 38342700 -101974065 + AluJo SINE Alu 5 305 -7 1950 139 4 0 chr10 38343301 38343625 -101973140 + AluSx SINE Alu 1 325 0 216 122 0 0 chr10 38343822 38343863 -101972902 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 473 279 150 27 chr10 38344037 38344467 -101972298 - LTR33 LTR ERVL -19 502 1 217 334 93 72 chr10 38344643 38345020 -101971745 + L2 LINE L2 2807 3191 -81 207 304 80 9 chr10 38346862 38346974 -101969791 + MIR SINE MIR 46 165 -97 267 349 48 24 chr10 38347068 38347194 -101969571 + MIR SINE MIR 16 144 -64 1215 190 5 0 chr10 38347361 38347572 -101969193 - L1PA16 LINE L1 -9 6157 5946 737 211 0 0 chr10 38347574 38347702 -101969063 - FLAM_A SINE Alu -5 128 1 323 228 69 10 chr10 38347714 38347815 -101968950 - MIR SINE MIR -74 188 82 234 62 0 0 chr10 38348318 38348350 -101968415 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 3220 190 34 19 chr10 38349377 38349998 -101966767 - LTR27 LTR ERV1 0 636 7 203 242 16 16 chr10 38350509 38350571 -101966194 + T-rich Low_complexity Low_complexity 2 63 0 247 308 176 22 chr10 38350791 38351018 -101965747 - MIR SINE MIR 0 262 1 653 219 163 0 chr10 38351027 38351187 -101965578 - MER5A DNA MER1_type -3 186 1 441 0 0 0 chr10 38354538 38354587 -101962178 + (TA)n Simple_repeat Simple_repeat 1 49 0 2468 82 3 0 chr10 38354952 38355257 -101961508 + AluSp SINE Alu 1 306 -7 5963 138 18 4 chr10 38355412 38356486 -101960279 + L1PA13 LINE L1 5048 6161 -2 847 201 44 136 chr10 38356488 38356818 -101959947 + L1ME1 LINE L1 5877 6164 0 21 36 0 0 chr10 38356818 38356846 -101959919 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 38356858 38356879 -101959886 + AT_rich Low_complexity Low_complexity 1 21 0 1916 105 108 0 chr10 38358702 38358979 -101957786 - AluSx SINE Alu -5 307 1 251 309 43 68 chr10 38359076 38359238 -101957527 + MIR SINE MIR 28 185 -77 327 78 0 0 chr10 38360187 38360238 -101956527 + (TG)n Simple_repeat Simple_repeat 2 52 0 2188 101 14 0 chr10 38360238 38360525 -101956240 - AluSp SINE Alu -22 291 1 2414 86 0 0 chr10 38361466 38361769 -101954996 - AluY SINE Alu -7 304 2 4232 93 21 5 chr10 38361775 38362355 -101954410 - L1MA3 LINE L1 -2 6303 5715 360 0 0 0 chr10 38362586 38362626 -101954139 + (TG)n Simple_repeat Simple_repeat 2 41 0 183 345 71 9 chr10 38363333 38363446 -101953319 - MIR SINE MIR -64 144 25 294 250 250 7 chr10 38363481 38363621 -101953144 + MIR SINE MIR 1 174 -88 615 258 19 6 chr10 38363658 38363817 -101952948 - MIR SINE MIR 0 262 102 2460 86 0 0 chr10 38363926 38364229 -101952536 + AluSx SINE Alu 1 303 -9 894 221 7 0 chr10 38366141 38366295 -101950470 - FRAM SINE Alu -11 155 1 193 218 0 184 chr10 38366330 38366378 -101950387 + L2 LINE L2 3243 3270 -43 687 250 113 79 chr10 38366378 38366910 -101949855 - MLT1H1 LTR MaLR -4 551 2 193 218 0 184 chr10 38366910 38366948 -101949817 + L2 LINE L2 3270 3313 0 3936 135 75 26 chr10 38367463 38368116 -101948649 - L1PA14 LINE L1 -12 6149 5465 375 307 105 66 chr10 38368605 38369207 -101947558 - L2 LINE L2 -337 2977 2353 1752 126 24 37 chr10 38369213 38369507 -101947258 + AluJo SINE Alu 1 290 -22 183 236 303 0 chr10 38369705 38369794 -101946971 + MER5A DNA MER1_type 45 160 -29 305 251 105 55 chr10 38372192 38372482 -101944283 - L1ME LINE L1 -425 5696 5385 397 288 71 41 chr10 38372616 38373009 -101943756 - L1ME LINE L1 -962 5184 4780 189 298 0 0 chr10 38373377 38373424 -101943341 - MIR SINE MIR -10 252 206 360 309 112 20 chr10 38373634 38373786 -101942979 + MIR3 SINE MIR 40 205 -3 229 196 36 45 chr10 38374075 38374187 -101942578 + (TATAA)n Simple_repeat Simple_repeat 3 113 0 221 191 0 0 chr10 38374265 38374307 -101942458 - MIR SINE MIR -108 154 113 27 0 0 0 chr10 38375650 38375677 -101941088 + AT_rich Low_complexity Low_complexity 1 27 0 3904 193 69 28 chr10 38375695 38376667 -101940098 - L1MC3 LINE L1 -16 7769 6733 350 284 47 24 chr10 38377656 38377783 -101938982 + MIR3 SINE MIR 51 180 -28 361 360 52 0 chr10 38378291 38378427 -101938338 - MIR3 SINE MIR -28 180 38 216 354 38 0 chr10 38378473 38378552 -101938213 + L2 LINE L2 3191 3272 -41 530 321 19 71 chr10 38378656 38378964 -101937801 - L2 LINE L2 -3 3269 2978 2150 130 0 0 chr10 38379410 38379703 -101937062 + AluSx SINE Alu 1 293 -19 233 329 31 31 chr10 38380155 38380316 -101936449 - L2 LINE L2 -783 2531 2371 2028 134 3 16 chr10 38380462 38380769 -101935996 - AluSq SINE Alu -10 303 1 235 284 181 0 chr10 38380833 38380949 -101935816 - MIR3 SINE MIR -30 178 42 1411 185 4 36 chr10 38382650 38382926 -101933839 - AluJb SINE Alu -25 287 21 700 200 33 0 chr10 38382944 38383064 -101933701 - FLAM_C SINE Alu -9 124 1 31 44 0 0 chr10 38384574 38384619 -101932146 + AT_rich Low_complexity Low_complexity 1 45 0 238 354 83 21 chr10 38384740 38384884 -101931881 - MIR SINE MIR -90 172 20 206 206 16 0 chr10 38385591 38385654 -101931111 + (TG)n Simple_repeat Simple_repeat 2 65 0 186 289 44 0 chr10 38386495 38386540 -101930225 - MIR SINE MIR -126 82 36 1890 128 30 0 chr10 38389696 38389962 -101926803 + AluSx SINE Alu 17 290 -22 333 303 121 0 chr10 38391167 38391299 -101925466 - L2 LINE L2 -7 3265 3118 937 219 11 22 chr10 38391347 38391525 -101925240 + MER45A DNA AcHobo 1 176 -2 5756 79 32 0 chr10 38391826 38392602 -101924163 - L1PA11 LINE L1 -1 6173 5373 532 290 52 26 chr10 38392602 38392833 -101923932 - L2 LINE L2 -27 3286 3050 514 185 0 0 chr10 38392972 38393053 -101923712 + AluJ/FLAM SINE Alu 2 82 -230 54 68 0 0 chr10 38393564 38393667 -101923098 + AT_rich Low_complexity Low_complexity 1 103 0 2175 113 0 3 chr10 38394103 38394405 -101922360 - AluSq SINE Alu -12 301 1 224 219 0 0 chr10 38397935 38397976 -101918789 + CT-rich Low_complexity Low_complexity 6 46 0 1837 219 27 3 chr10 38398432 38398807 -101917958 - MLT1B LTR MaLR -6 384 1 256 346 19 9 chr10 38398953 38399060 -101917705 + MER5A DNA MER1_type 79 186 -3 393 328 78 47 chr10 38399147 38399632 -101917133 + L2 LINE L2 2257 2756 -558 183 247 86 32 chr10 38399668 38399761 -101917004 - MER5A DNA MER1_type -24 165 68 207 344 131 0 chr10 38399954 38400076 -101916689 + L2 LINE L2 2943 3080 -192 215 238 0 0 chr10 38400186 38400228 -101916537 + L2 LINE L2 3270 3311 -2 1501 207 7 13 chr10 38400481 38400780 -101915985 + AluJo SINE Alu 3 299 -13 952 248 39 70 chr10 38400834 38401352 -101915413 + MLT1H LTR MaLR 6 549 0 353 366 57 18 chr10 38402437 38402664 -101914101 + MIR SINE MIR 7 242 -20 1760 160 20 10 chr10 38404596 38404896 -101911869 + AluJb SINE Alu 1 303 -9 2102 122 3 3 chr10 38405510 38405797 -101910968 - AluSq SINE Alu -26 287 1 3782 133 3 5 chr10 38406065 38406672 -101910093 + L1PA16 LINE L1 5420 6025 -141 839 109 0 0 chr10 38406686 38406796 -101909969 + AluSq/x SINE Alu 1 110 -203 1386 151 0 46 chr10 38406908 38407034 -101909731 + L1PA16 LINE L1 5914 6023 -143 2248 107 0 3 chr10 38407034 38407334 -101909431 + AluSx SINE Alu 1 299 -13 1386 151 0 46 chr10 38407334 38407466 -101909299 + L1PA16 LINE L1 6023 6160 -6 919 245 14 0 chr10 38407475 38407687 -101909078 - MER20 DNA MER1_type -3 216 2 22 0 0 0 chr10 38407993 38408015 -101908750 + AT_rich Low_complexity Low_complexity 1 22 0 218 322 78 92 chr10 38408487 38408770 -101907995 + L2 LINE L2 2924 3202 -70 1737 157 14 17 chr10 38410261 38410554 -101906211 - AluJo SINE Alu -20 292 1 205 333 207 30 chr10 38410918 38411053 -101905712 + L2 LINE L2 3114 3272 0 216 111 0 0 chr10 38411742 38411778 -101904987 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 231 0 0 chr10 38413900 38413978 -101902787 + (TA)n Simple_repeat Simple_repeat 2 79 0 1654 176 11 0 chr10 38413998 38414270 -101902495 - AluJb SINE Alu -37 275 1 886 234 46 0 chr10 38414404 38414601 -101902164 + MIR SINE MIR 3 208 -54 517 187 16 41 chr10 38415813 38415936 -101900829 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 38416892 38416913 -101899852 + AT_rich Low_complexity Low_complexity 1 21 0 2089 121 0 7 chr10 38417167 38417457 -101899308 - AluSx SINE Alu -24 288 1 666 230 29 35 chr10 38417634 38417808 -101898957 + MER5B DNA MER1_type 1 173 -5 334 296 72 16 chr10 38417823 38417948 -101898817 - MER5A DNA MER1_type 0 189 58 306 367 47 33 chr10 38418234 38418596 -101898169 - L2 LINE L2 -1906 1408 1042 2953 133 4 0 chr10 38418968 38419418 -101897347 - L1PA16 LINE L1 -9 6157 5706 2100 114 24 0 chr10 38420044 38420164 -101896601 + AluSx SINE Alu 4 120 -192 387 0 0 0 chr10 38420164 38420207 -101896558 + (CA)n Simple_repeat Simple_repeat 2 44 0 2100 114 24 0 chr10 38420207 38420376 -101896389 + AluSx SINE Alu 120 300 -12 277 319 101 0 chr10 38420620 38420739 -101896026 + L2 LINE L2 3142 3272 0 21 0 0 0 chr10 38421479 38421500 -101895265 + AT_rich Low_complexity Low_complexity 1 21 0 466 91 26 0 chr10 38422169 38422246 -101894519 + (TTCC)n Simple_repeat Simple_repeat 4 82 0 232 352 93 62 chr10 38422442 38422635 -101894130 - L2 LINE L2 -6 3266 3068 429 287 12 57 chr10 38424739 38424986 -101891779 + MER106A DNA MER1_type 1 236 0 1772 111 100 7 chr10 38424995 38425265 -101891500 + AluSx SINE Alu 7 301 -11 24 53 0 0 chr10 38425853 38425891 -101890874 + AT_rich Low_complexity Low_complexity 1 38 0 8622 153 106 67 chr10 38426443 38427213 -101889552 + L1MCa LINE L1 7 745 -5681 1680 186 0 21 chr10 38427213 38427498 -101889267 - AluJo SINE Alu -33 279 1 8622 153 106 67 chr10 38427498 38428478 -101888287 + L1MCa LINE L1 745 1874 -4552 5685 37 0 0 chr10 38428478 38429155 -101887610 + L1PA4 LINE L1 5474 6150 -5 8622 153 106 67 chr10 38429155 38429727 -101887038 + L1MCa LINE L1 1874 2422 -4004 1388 197 25 6 chr10 38429723 38430088 -101886677 + L1MCa LINE L1 3123 3494 -2932 * 4681 223 64 9 chr10 38430091 38431981 -101884784 + L1MCa LINE L1 3910 5911 -702 859 273 78 6 chr10 38431997 38432345 -101884420 + MLT1C LTR MaLR 83 455 -12 528 262 77 22 chr10 38432371 38432554 -101884211 + MIR SINE MIR 23 215 -47 2323 161 29 7 chr10 38432849 38433258 -101883507 + MSTB LTR MaLR 1 418 -8 198 0 0 0 chr10 38434044 38434066 -101882699 + (A)n Simple_repeat Simple_repeat 1 22 0 2567 168 17 0 chr10 38434307 38434725 -101882040 - MSTB LTR MaLR 0 426 2 285 242 42 21 chr10 38436729 38436824 -101879941 + CT-rich Low_complexity Low_complexity 4 100 0 752 276 5 23 chr10 38437446 38437663 -101879102 - Charlie1 DNA MER1_type -2542 219 7 345 302 18 12 chr10 38437862 38438031 -101878734 + CT-rich Low_complexity Low_complexity 1 170 0 266 296 80 63 chr10 38438167 38438335 -101878430 - L1M4 LINE L1 -2979 3167 3003 3136 149 0 13 chr10 38438335 38438864 -101877901 - L1PA16 LINE L1 0 6166 5645 266 296 80 63 chr10 38438864 38439455 -101877310 - L1M4 LINE L1 -3143 3003 2395 5571 236 75 34 chr10 38440116 38440772 -101875993 - L1ME1 LINE L1 -5 6230 5602 1139 261 4 0 chr10 38440772 38441010 -101875755 + MER8 DNA MER2_type 1 239 0 5571 236 75 34 chr10 38441010 38443627 -101873138 - L1ME1 LINE L1 -633 5602 2835 439 275 79 4 chr10 38443632 38443861 -101872904 - L1ME1 LINE L1 -3698 2517 2272 180 0 0 0 chr10 38443868 38443888 -101872877 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 2864 72 0 0 chr10 38443888 38444275 -101872490 - L1PA8 LINE L1 -24 6148 5762 243 259 12 0 chr10 38444293 38444378 -101872387 - L1ME1 LINE L1 -4085 2311 2226 269 286 19 67 chr10 38444383 38444488 -101872277 + MIR SINE MIR 163 262 0 338 57 19 0 chr10 38445339 38445392 -101871373 + (TA)n Simple_repeat Simple_repeat 1 54 0 688 157 0 98 chr10 38446370 38446523 -101870242 + FLAM_C SINE Alu 5 142 -1 900 196 0 0 chr10 38446550 38446693 -101870072 + AluJb SINE Alu 140 282 -30 216 0 0 0 chr10 38446697 38446721 -101870044 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 396 219 23 0 chr10 38448311 38448439 -101868326 + (TG)n Simple_repeat Simple_repeat 1 131 0 180 237 129 54 chr10 38449086 38449179 -101867586 + MIR3 SINE MIR 12 111 -97 237 193 67 118 chr10 38449373 38449492 -101867273 - MER94 DNA DNA -15 119 7 21 36 0 0 chr10 38450538 38450566 -101866199 + AT_rich Low_complexity Low_complexity 1 28 0 185 339 42 73 chr10 38450669 38450861 -101865904 - L2 LINE L2 -358 2956 2771 707 194 58 7 chr10 38451344 38451499 -101865266 - MIR SINE MIR -10 252 90 740 219 0 0 chr10 38452176 38452295 -101864470 - FLAM_A SINE Alu -17 125 7 416 298 14 93 chr10 38452318 38452607 -101864158 + L1MC4a LINE L1 2061 2326 -4070 258 254 32 24 chr10 38452728 38452854 -101863911 + L1MC4a LINE L1 3836 3962 -2253 344 256 146 25 chr10 38453174 38453373 -101863392 + L1MC4a LINE L1 5778 6000 -1877 421 178 0 0 chr10 38453686 38453759 -101863006 - AluJ/FLAM SINE Alu -235 77 5 1705 157 16 42 chr10 38454790 38455096 -101861669 - AluJo SINE Alu -13 299 2 213 356 20 94 chr10 38455117 38455266 -101861499 + L2 LINE L2 3127 3264 -8 1757 177 0 10 chr10 38455402 38455707 -101861058 - AluJo SINE Alu -9 303 2 263 270 106 74 chr10 38455820 38456009 -101860756 - L3b LINE CR1 -119 1464 1270 790 147 7 44 chr10 38456951 38457087 -101859678 - FLAM_C SINE Alu -10 133 3 521 301 38 60 chr10 38457202 38457468 -101859297 - MIR SINE MIR 0 262 3 1774 199 145 43 chr10 38458356 38458824 -101857941 - MLT2B1 LTR ERVL -2 518 3 811 175 32 0 chr10 38458919 38459045 -101857720 + FLAM_C SINE Alu 1 130 -3 2127 99 0 13 chr10 38459180 38459482 -101857283 - AluY SINE Alu -13 298 1 5230 189 46 57 chr10 38460260 38460888 -101855877 - Charlie1a DNA MER1_type -1308 1453 820 1632 169 10 24 chr10 38460888 38461183 -101855582 + AluJo SINE Alu 1 291 -21 5230 189 46 57 chr10 38461183 38461956 -101854809 - Charlie1a DNA MER1_type -1941 820 1 1779 142 0 0 chr10 38461973 38462219 -101854546 + AluSx SINE Alu 46 291 -21 472 213 148 7 chr10 38462227 38462382 -101854383 - MIR SINE MIR -21 241 65 2636 123 72 29 chr10 38462825 38463239 -101853526 + MSTB1 LTR MaLR 1 432 0 2451 151 29 39 chr10 38464043 38464420 -101852345 + MLT2D LTR ERVL 1 375 -39 333 0 0 0 chr10 38464420 38464457 -101852308 + (TG)n Simple_repeat Simple_repeat 2 38 0 2451 151 29 39 chr10 38464457 38464495 -101852270 + MLT2D LTR ERVL 375 412 -2 483 246 46 8 chr10 38464616 38464746 -101852019 + MER5B DNA MER1_type 1 135 -43 189 0 0 0 chr10 38465206 38465227 -101851538 + (A)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38466750 38466771 -101849994 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38466829 38466850 -101849915 + (TG)n Simple_repeat Simple_repeat 2 22 0 695 273 162 23 chr10 38466857 38467245 -101849520 + L1ME4a LINE L1 5678 6119 -2 190 315 101 0 chr10 38467357 38467446 -101849319 - L2 LINE L2 0 3272 3175 3467 119 0 39 chr10 38467597 38468133 -101848632 + L1PB1 LINE L1 5637 6151 0 257 258 59 102 chr10 38468343 38468529 -101848236 - MER112 DNA MER1_type 0 260 83 1122 273 60 13 chr10 38468537 38468918 -101847847 - L1MD2 LINE L1 -4 6355 5957 1390 105 0 0 chr10 38468996 38469177 -101847588 - AluSq SINE Alu -8 305 125 215 277 42 67 chr10 38469240 38469359 -101847406 - L2 LINE L2 -569 2745 2630 196 154 39 0 chr10 38469399 38469451 -101847314 + CT-rich Low_complexity Low_complexity 4 57 0 24 32 0 0 chr10 38470381 38470412 -101846353 + AT_rich Low_complexity Low_complexity 1 31 0 40247 34 1 1 chr10 38470438 38475967 -101840798 - L1PA4 LINE L1 -3 6152 623 735 69 0 0 chr10 38475965 38476052 -101840713 - L1PA4 LINE L1 -6048 98 12 * 387 41 0 0 chr10 38478126 38478175 -101838590 + (TG)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr10 38478425 38478452 -101838313 + AT_rich Low_complexity Low_complexity 1 27 0 2304 96 20 0 chr10 38478693 38478996 -101837769 - AluSx SINE Alu -3 309 1 2258 102 34 57 chr10 38479310 38479694 -101837071 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 38480286 38480329 -101836436 + AT_rich Low_complexity Low_complexity 1 43 0 1873 165 43 12 chr10 38481468 38481795 -101834970 + MER1B DNA MER1_type 1 337 0 759 234 129 10 chr10 38482494 38482703 -101834062 - MIR SINE MIR 0 262 29 1352 175 6 127 chr10 38484159 38484497 -101832268 - AluJb SINE Alu -15 297 1 325 369 157 10 chr10 38484791 38484989 -101831776 + MIR SINE MIR 36 262 0 1720 234 151 41 chr10 38484997 38485506 -101831259 + MLT1F1 LTR MaLR 3 567 0 409 330 34 62 chr10 38485788 38486140 -101830625 + L2 LINE L2 2545 2886 -428 508 231 27 12 chr10 38486390 38486536 -101830229 + MLT1H LTR MaLR 412 547 -2 353 307 139 0 chr10 38486536 38486673 -101830092 + L2 LINE L2 2905 3060 -253 3925 225 48 23 chr10 38486705 38487204 -101829561 - MER21B LTR ERV1 -11 852 322 2132 127 10 0 chr10 38487204 38487511 -101829254 - AluSp SINE Alu -3 310 1 3925 225 48 23 chr10 38487511 38487842 -101828923 - MER21B LTR ERV1 -541 322 1 2227 112 3 0 chr10 38488005 38488301 -101828464 + AluSx SINE Alu 1 297 -15 342 349 89 19 chr10 38488389 38488704 -101828061 + L2 LINE L2 2641 2977 -337 1982 266 101 39 chr10 38488899 38490063 -101826702 - L2 LINE L2 -27 3286 2046 305 322 0 0 chr10 38490236 38490323 -101826442 + L2 LINE L2 3184 3270 -2 837 228 0 0 chr10 38491686 38491844 -101824921 - FRAM SINE Alu -17 159 2 1293 59 65 6 chr10 38491929 38492099 -101824666 + L1PA5 LINE L1 5975 6154 0 201 188 281 31 chr10 38493223 38493319 -101823446 - MIR SINE MIR -126 136 17 307 331 116 0 chr10 38493466 38493587 -101823178 - L2 LINE L2 -2 3270 3136 1249 107 0 37 chr10 38493701 38493888 -101822877 - AluSx SINE Alu -132 180 1 215 263 163 0 chr10 38494419 38494499 -101822266 + L2 LINE L2 3148 3240 -32 213 121 0 0 chr10 38494515 38494548 -101822217 + (TTTC)n Simple_repeat Simple_repeat 3 35 0 5372 106 23 1 chr10 38497389 38498161 -101818604 - L1PA11 LINE L1 -1 6173 5385 230 276 0 13 chr10 38498293 38498369 -101818396 - HAL1 LINE L1 -1429 1078 1004 1056 251 72 38 chr10 38498369 38498760 -101818005 - L2 LINE L2 -755 2559 2156 517 146 117 58 chr10 38499941 38500044 -101816721 + AluJo SINE Alu 84 192 -120 711 157 0 0 chr10 38500243 38500345 -101816420 + AluJo SINE Alu 197 298 -14 620 282 46 5 chr10 38500955 38501171 -101815594 + LTR33 LTR ERVL 297 521 0 353 293 80 63 chr10 38501932 38502330 -101814435 + LTR33 LTR ERVL 70 498 -25 1522 96 18 9 chr10 38502728 38502946 -101813819 + AluSq SINE Alu 91 310 -3 24 91 0 0 chr10 38503072 38503138 -101813627 + AT_rich Low_complexity Low_complexity 1 66 0 2160 223 15 33 chr10 38503841 38504443 -101812322 - L1MB8 LINE L1 -1 6246 5656 727 186 41 71 chr10 38504443 38504732 -101812033 + MLT1A2 LTR MaLR 1 336 -38 9525 238 49 23 chr10 38504747 38508396 -101808369 - L1MB8 LINE L1 -587 5660 1956 2504 79 0 0 chr10 38508396 38508700 -101808065 - AluY SINE Alu -7 304 1 9525 238 49 23 chr10 38508700 38508783 -101807982 - L1MB8 LINE L1 -4291 1956 1877 781 296 47 0 chr10 38509098 38509395 -101807370 - L1MEc LINE L1 -4574 2564 2254 6372 80 20 6 chr10 38509398 38510511 -101806254 + L1PA13 LINE L1 5025 6152 -11 227 278 0 0 chr10 38510809 38510881 -101805884 - L1MEc LINE L1 -4846 2113 2042 1938 281 38 20 chr10 38510885 38511494 -101805271 - L1MEc LINE L1 -6233 626 7 291 317 0 0 chr10 38513044 38513126 -101803639 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 331 193 307 0 chr10 38514511 38514599 -101802166 - MIR3 SINE MIR -13 195 81 366 258 75 33 chr10 38515704 38515824 -101800941 - MIR3 SINE MIR -19 189 65 311 279 195 19 chr10 38517081 38517235 -101799530 - MIR SINE MIR -41 221 41 2100 175 24 5 chr10 38517246 38517663 -101799102 - L1MB1 LINE L1 0 6168 5744 347 177 40 7 chr10 38518959 38519038 -101797727 + MIR SINE MIR 86 145 -63 2205 117 45 31 chr10 38520328 38520687 -101796078 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr10 38521073 38521094 -101795671 + AT_rich Low_complexity Low_complexity 1 21 0 1990 157 71 8 chr10 38522472 38522868 -101793897 - MSTA LTR MaLR -7 421 1 200 33 0 33 chr10 38523026 38523056 -101793709 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1475 106 15 0 chr10 38523116 38523315 -101793450 - AluSg/x SINE Alu -1 309 108 23 0 0 0 chr10 38523663 38523686 -101793079 + AT_rich Low_complexity Low_complexity 1 23 0 6678 21 0 1 chr10 38523976 38524785 -101791980 - L1PA3 LINE L1 -3 6152 5345 2252 108 0 25 chr10 38524815 38525130 -101791635 + AluSq SINE Alu 1 307 -6 193 365 46 51 chr10 38527235 38527668 -101789097 + L2 LINE L2 2462 2892 -422 180 118 0 59 chr10 38527977 38528011 -101788754 + L2 LINE L2 1198 1229 -2085 5826 191 164 40 chr10 38528475 38530036 -101786729 + MER52A LTR ERV1 1 1755 0 23 78 0 0 chr10 38530860 38530911 -101785854 + AT_rich Low_complexity Low_complexity 1 51 0 206 31 0 31 chr10 38532062 38532094 -101784671 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 799 253 115 59 chr10 38532276 38532833 -101783932 + MLT1G LTR MaLR 1 588 -2 377 69 0 17 chr10 38533134 38533192 -101783573 + (TG)n Simple_repeat Simple_repeat 2 58 0 203 184 0 0 chr10 38533898 38533936 -101782829 + (TA)n Simple_repeat Simple_repeat 2 39 0 799 196 17 39 chr10 38533986 38534165 -101782600 - FRAM SINE Alu -1 175 1 506 312 73 14 chr10 38534834 38535052 -101781713 - MIR SINE MIR 0 262 32 1658 159 11 22 chr10 38535976 38536253 -101780512 - AluJb SINE Alu -24 288 15 273 29 0 0 chr10 38537345 38537379 -101779386 + (TC)n Simple_repeat Simple_repeat 1 34 0 273 29 0 0 chr10 38537378 38537412 -101779353 + (CA)n Simple_repeat Simple_repeat 1 34 0 371 363 86 25 chr10 38538205 38538483 -101778282 + L3b LINE CR1 1116 1410 -173 2587 174 36 12 chr10 38539026 38539606 -101777159 - L1MC3 LINE L1 -1 7784 7191 226 289 48 0 chr10 38539609 38539692 -101777073 - MLT1F1 LTR MaLR -442 125 39 894 204 52 0 chr10 38539695 38539925 -101776840 - L1MC3 LINE L1 -687 7098 6857 * 21904 180 23 15 chr10 38539919 38545927 -101770838 - L1PA11 LINE L1 -1 7611 728 1916 107 0 8 chr10 38545927 38546190 -101770575 + AluSx SINE Alu 36 296 -16 21904 180 23 15 chr10 38546190 38546924 -101769841 - L1PA11 LINE L1 -6884 728 1 4339 216 105 31 chr10 38546918 38548825 -101767940 - L1MD3 LINE L1 -743 5403 4848 * 1232 220 178 48 chr10 38549199 38549659 -101767106 + MLT2B1 LTR ERVL 1 520 0 2220 123 0 3 chr10 38550671 38550980 -101765785 - AluSc SINE Alu -1 308 1 584 343 48 66 chr10 38553205 38553703 -101763062 - L2 LINE L2 -17 3296 2808 446 284 7 47 chr10 38553698 38553846 -101762919 - MIR SINE MIR -10 252 111 * 644 334 44 39 chr10 38553926 38554315 -101762450 - L2 LINE L2 -521 2793 2403 829 253 4 56 chr10 38554320 38554569 -101762196 - MIR SINE MIR -2 260 25 3124 140 15 39 chr10 38554614 38554721 -101762044 - MER1A DNA MER1_type -2175 525 417 2055 117 0 37 chr10 38554721 38555045 -101761720 - AluSx SINE Alu 0 312 1 3124 140 15 39 chr10 38555045 38555474 -101761291 - MER1A DNA MER1_type -2283 417 2 565 241 52 31 chr10 38555522 38555713 -101761052 - L2 LINE L2 -939 2375 2181 337 279 29 88 chr10 38555734 38555870 -101760895 - MIR SINE MIR -21 241 114 187 229 243 0 chr10 38555877 38555947 -101760818 + MIR SINE MIR 175 261 -1 21 57 0 0 chr10 38557034 38557069 -101759696 + AT_rich Low_complexity Low_complexity 1 35 0 1903 131 178 8 chr10 38557152 38557316 -101759449 + MSTA LTR MaLR 1 136 -292 4450 97 5 3 chr10 38557316 38557937 -101758828 + L1PA10 LINE L1 5545 6166 -2 1903 131 178 8 chr10 38557937 38558132 -101758633 + MSTA LTR MaLR 136 421 -7 228 227 80 0 chr10 38558142 38558217 -101758548 - HAL1 LINE L1 -105 2402 2322 323 265 99 63 chr10 38558220 38558443 -101758322 - HAL1 LINE L1 -213 2294 2064 354 308 107 6 chr10 38558742 38558901 -101757864 - L1ME3A LINE L1 -233 5937 5763 5451 129 103 11 chr10 38558901 38559884 -101756881 - Tigger3b DNA MER2_type -157 1074 2 644 223 99 20 chr10 38559884 38560085 -101756680 + MER2 DNA MER2_type 129 345 0 568 299 65 34 chr10 38560100 38560499 -101756266 - L1ME3A LINE L1 -403 5718 5313 9442 210 53 14 chr10 38560518 38561045 -101755720 + L1MC1 LINE L1 436 941 -5485 2360 64 0 3 chr10 38561045 38561341 -101755424 + AluY SINE Alu 1 295 -16 9442 210 53 14 chr10 38561341 38565300 -101751465 + L1MC1 LINE L1 941 5097 -1329 889 172 30 10 chr10 38565290 38565493 -101751272 + L1MC1 LINE L1 5597 5875 -749 * 2207 19 0 0 chr10 38565500 38565759 -101751006 + L1PA3 LINE L1 5894 6152 -3 3904 144 61 14 chr10 38565815 38566521 -101750244 + L1MC1 LINE L1 5875 6613 0 1134 148 21 93 chr10 38566521 38566848 -101749917 - MER96B DNA MER1_type? -69 348 46 303 370 31 0 chr10 38566869 38566996 -101749769 + MIR SINE MIR 119 249 -13 326 338 127 42 chr10 38567581 38567794 -101748971 - MLT1I LTR MaLR -75 334 104 259 288 107 12 chr10 38568480 38568803 -101747962 - L1ME LINE L1 -489 5632 5279 2119 112 0 7 chr10 38568849 38569144 -101747621 + AluSg SINE Alu 1 293 -17 45 19 0 0 chr10 38569371 38569423 -101747342 + AT_rich Low_complexity Low_complexity 1 52 0 2376 129 3 11 chr10 38569440 38569811 -101746954 - L1PB4 LINE L1 -13 6143 5776 336 202 0 26 chr10 38569880 38569994 -101746771 + (TA)n Simple_repeat Simple_repeat 2 112 0 2711 140 2 2 chr10 38569994 38570438 -101746327 - L1PB4 LINE L1 -367 5789 5346 30 45 0 0 chr10 38570869 38570913 -101745852 + AT_rich Low_complexity Low_complexity 1 44 0 399 185 33 11 chr10 38571518 38571610 -101745155 + L1MA9 LINE L1 6191 6284 -28 186 236 55 0 chr10 38572560 38572615 -101744150 - MIR SINE MIR -46 216 159 198 103 0 0 chr10 38572809 38572838 -101743927 + (TG)n Simple_repeat Simple_repeat 2 30 0 31 26 0 0 chr10 38573585 38573623 -101743142 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr10 38573756 38573781 -101742984 + AT_rich Low_complexity Low_complexity 1 25 0 445 261 37 15 chr10 38574736 38574870 -101741895 - L2 LINE L2 0 3313 3177 686 247 61 96 chr10 38574954 38575024 -101741741 - L1MEc LINE L1 -4604 2221 2150 1116 184 18 0 chr10 38575024 38575247 -101741518 + L1MA8 LINE L1 6062 6288 -3 686 247 61 96 chr10 38575247 38575747 -101741018 - L1MEc LINE L1 -4675 2150 1671 228 240 27 13 chr10 38575775 38575850 -101740915 + (TA)n Simple_repeat Simple_repeat 2 77 0 273 127 127 73 chr10 38575916 38576026 -101740739 - L1M1 LINE L1 -5164 2401 2286 305 282 135 6 chr10 38576060 38576216 -101740549 - L1MEc LINE L1 -5327 1215 1040 606 288 25 0 chr10 38578199 38578359 -101738406 - MER5B DNA MER1_type 0 178 15 947 130 33 22 chr10 38578570 38578754 -101738011 + MER53 DNA DNA 4 189 0 232 136 15 15 chr10 38580412 38580478 -101736287 + T-rich Low_complexity Low_complexity 2 67 0 1798 176 24 12 chr10 38581298 38581638 -101735127 - MER2 DNA MER2_type 0 344 1 1425 248 48 36 chr10 38582743 38583219 -101733546 - MER74B LTR ERVL -82 540 59 389 266 47 30 chr10 38583623 38583792 -101732973 - L1ME3A LINE L1 -219 5951 5780 590 306 93 29 chr10 38584119 38584678 -101732087 - L1ME3A LINE L1 -860 5286 4692 2136 122 0 7 chr10 38584685 38584988 -101731777 - AluSq SINE Alu -12 301 1 224 57 0 29 chr10 38585038 38585073 -101731692 + (TCC)n Simple_repeat Simple_repeat 3 36 0 5240 152 31 44 chr10 38585253 38585357 -101731408 - L1PB1 LINE L1 -2 6149 6045 2823 0 0 0 chr10 38585357 38585663 -101731102 - AluYa5 SINE Alu -5 306 1 5240 152 31 44 chr10 38585663 38587569 -101729196 - L1PB1 LINE L1 -106 6045 4177 703 275 128 10 chr10 38587561 38588028 -101728737 + L1ME3A LINE L1 5401 5934 -255 * 204 111 0 0 chr10 38588905 38588941 -101727824 + (CA)n Simple_repeat Simple_repeat 1 36 0 338 0 24 0 chr10 38589404 38589446 -101727319 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1915 132 21 0 chr10 38589449 38589729 -101727036 - AluSx SINE Alu -26 286 1 2299 67 7 0 chr10 38590933 38591217 -101725548 + AluY SINE Alu 6 291 -20 417 246 0 0 chr10 38591220 38591338 -101725427 + (TATATG)n Simple_repeat Simple_repeat 2 119 0 1773 193 22 14 chr10 38592528 38592896 -101723869 - L1PA16 LINE L1 -22 6144 5774 2087 98 0 4 chr10 38593128 38593405 -101723360 + AluY SINE Alu 1 276 -35 225 0 0 0 chr10 38593406 38593431 -101723334 + (TC)n Simple_repeat Simple_repeat 2 26 0 475 70 0 62 chr10 38593431 38593559 -101723206 + (TA)n Simple_repeat Simple_repeat 2 121 0 232 329 255 12 chr10 38594051 38594212 -101722553 + MIR SINE MIR 52 251 -11 243 338 0 0 chr10 38595433 38595504 -101721261 + MIR SINE MIR 115 185 -77 840 192 54 17 chr10 38595565 38595741 -101721024 - MIR SINE MIR -60 202 24 439 321 14 21 chr10 38595882 38596022 -101720743 + MIR3 SINE MIR 67 205 -3 206 321 127 0 chr10 38596064 38596198 -101720567 + L3b LINE CR1 1316 1466 -117 24 32 0 0 chr10 38597230 38597261 -101719504 + AT_rich Low_complexity Low_complexity 1 31 0 32 26 0 0 chr10 38598811 38598850 -101717915 + AT_rich Low_complexity Low_complexity 1 39 0 11734 140 27 13 chr10 38598860 38602042 -101714723 - L1MA1 LINE L1 0 7721 4493 6655 129 37 1 chr10 38602040 38603098 -101713667 - L1MA1 LINE L1 -4723 2842 1747 * 21 0 0 0 chr10 38603132 38603153 -101713612 + AT_rich Low_complexity Low_complexity 1 21 0 1386 118 80 38 chr10 38605857 38606095 -101710670 + Tigger2a DNA MER2_type 1 248 -186 864 271 24 0 chr10 38606488 38606698 -101710067 + MER58A DNA MER1_type 10 224 0 335 297 116 7 chr10 38607314 38607469 -101709296 + MIR SINE MIR 1 172 -90 3452 236 49 6 chr10 38609858 38610732 -101706033 + L1P LINE L1 1940 2851 -3295 2369 196 7 0 chr10 38610785 38611233 -101705532 + L1P LINE L1 3803 4253 -1893 258 288 12 0 chr10 38611234 38611314 -101705451 + L2 LINE L2 2527 2607 -707 217 329 205 48 chr10 38611421 38611792 -101704973 + L2 LINE L2 2867 3295 -18 1659 221 19 27 chr10 38612046 38612412 -101704353 - MLT1A2 LTR MaLR -11 363 1 242 344 48 40 chr10 38613111 38613236 -101703529 - MER5A DNA MER1_type -6 183 58 2082 129 0 3 chr10 38613577 38613879 -101702886 + AluSx SINE Alu 1 301 -11 360 323 40 25 chr10 38613905 38614196 -101702569 + L1ME LINE L1 2199 2457 -3758 2177 125 0 0 chr10 38614325 38614628 -101702137 - AluSq SINE Alu -10 303 1 2356 83 0 10 chr10 38614633 38614945 -101701820 - AluSg SINE Alu 0 310 2 2246 106 0 13 chr10 38616199 38616510 -101700255 - AluSx SINE Alu -5 307 1 287 265 173 33 chr10 38617635 38617971 -101698794 + L1ME LINE L1 5351 5733 -457 195 70 47 23 chr10 38618256 38618299 -101698466 + (TA)n Simple_repeat Simple_repeat 1 44 0 1043 213 7 79 chr10 38618299 38618391 -101698374 + MLT1B LTR MaLR 10 107 -283 1356 126 39 39 chr10 38618391 38618621 -101698144 - MER30 DNA MER1_type 0 230 1 1043 213 7 79 chr10 38618621 38618805 -101697960 + MLT1B LTR MaLR 107 266 -124 863 159 7 0 chr10 38618832 38618970 -101697795 + L1M4 LINE L1 5489 5627 -547 745 162 33 8 chr10 38618990 38619139 -101697626 + MLT1B LTR MaLR 275 389 -1 186 133 0 0 chr10 38619144 38619174 -101697591 + (TATG)n Simple_repeat Simple_repeat 2 31 0 1016 210 31 43 chr10 38619180 38619528 -101697237 - Tigger3(Golem) DNA MER2_type 0 3036 1 21 0 0 0 chr10 38619557 38619578 -101697187 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 38619624 38619667 -101697098 + AT_rich Low_complexity Low_complexity 1 43 0 4623 191 21 19 chr10 38620770 38621835 -101694930 - L1MC2 LINE L1 -95 6249 5186 370 237 58 106 chr10 38621842 38622019 -101694746 - L1ME4a LINE L1 -2 6119 5964 1732 209 62 66 chr10 38622019 38622453 -101694312 + MLT1D LTR MaLR 5 438 -67 1859 183 0 0 chr10 38622453 38622765 -101694000 - AluJo SINE Alu 0 312 1 1732 209 62 66 chr10 38622765 38622833 -101693932 + MLT1D LTR MaLR 438 505 0 370 237 58 106 chr10 38622833 38622984 -101693781 - L1ME4a LINE L1 -157 5964 5807 2450 173 97 45 chr10 38623437 38623581 -101693184 + MLT1F1 LTR MaLR 1 136 -431 15750 33 7 2 chr10 38623581 38626278 -101690487 + L1PA4 LINE L1 3469 6155 0 2450 173 97 45 chr10 38626278 38626670 -101690095 + MLT1F1 LTR MaLR 136 565 -2 210 400 189 0 chr10 38627170 38627355 -101689410 + L2 LINE L2 2651 2870 -444 520 350 15 0 chr10 38627433 38627630 -101689135 + MIR SINE MIR 57 256 -6 237 366 117 25 chr10 38627657 38627938 -101688827 + L2 LINE L2 2966 3272 0 1517 177 0 0 chr10 38628113 38628350 -101688415 + AluJo SINE Alu 44 280 -32 689 273 67 38 chr10 38628389 38628704 -101688061 + HsTC2a DNA Tc2 1 324 -420 1094 304 112 22 chr10 38628719 38629100 -101687665 + L1MC4 LINE L1 7189 7535 -507 489 34 0 0 chr10 38629100 38629159 -101687606 + (CA)n Simple_repeat Simple_repeat 1 59 0 1094 304 112 22 chr10 38629159 38629539 -101687226 + L1MC4 LINE L1 7535 8018 -24 299 214 125 54 chr10 38629624 38629736 -101687029 + HsTC2a DNA Tc2 317 436 -306 1911 122 0 4 chr10 38629828 38630091 -101686674 - AluSc SINE Alu -47 262 1 406 206 237 10 chr10 38630172 38630254 -101686511 + HsTC2a DNA Tc2 502 564 -1334 251 53 0 26 chr10 38630254 38630292 -101686473 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 406 206 237 10 chr10 38630292 38630403 -101686362 + HsTC2a DNA Tc2 564 739 -3 366 325 6 18 chr10 38630935 38631101 -101685664 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 1917 165 9 6 chr10 38631245 38631648 -101685117 - L1MA9 LINE L1 -697 5615 5212 3542 168 34 10 chr10 38631652 38632330 -101684435 + L1MA9 LINE L1 5619 6312 0 766 205 40 0 chr10 38634800 38634951 -101681814 + MER45A DNA AcHobo 1 157 -21 1195 243 31 6 chr10 38637000 38637325 -101679440 + L1MB4 LINE L1 4810 5142 -1004 2721 82 0 6 chr10 38637326 38637678 -101679087 - THE1A LTR MaLR 0 355 6 3849 180 16 49 chr10 38637678 38637915 -101678850 + L1MB4 LINE L1 5139 5382 -798 662 218 0 15 chr10 38637915 38638048 -101678717 + FLAM_A SINE Alu 1 131 -2 3849 180 16 49 chr10 38638048 38638771 -101677994 + L1MB4 LINE L1 5382 6068 -112 286 264 18 73 chr10 38640896 38641006 -101675759 - MIR SINE MIR -5 257 154 1223 245 162 35 chr10 38641011 38641492 -101675273 - MLT1H LTR MaLR -5 544 3 238 244 0 0 chr10 38641495 38641540 -101675225 - MIR SINE MIR -105 157 113 214 309 16 98 chr10 38642254 38642448 -101674317 + MIR SINE MIR 72 249 -13 362 243 53 66 chr10 38642859 38643011 -101673754 + L1MB8 LINE L1 6029 6178 0 291 140 0 0 chr10 38643047 38643097 -101673668 + (TC)n Simple_repeat Simple_repeat 1 50 0 1128 149 0 0 chr10 38643099 38643260 -101673505 - AluJb SINE Alu -15 297 137 21 82 0 0 chr10 38643652 38643701 -101673064 + AT_rich Low_complexity Low_complexity 1 49 0 413 299 8 0 chr10 38645350 38645467 -101671298 - MER94 DNA DNA 0 134 17 562 255 39 25 chr10 38645684 38645857 -101670908 + MIR SINE MIR 16 191 -69 517 277 106 43 chr10 38646064 38646346 -101670419 - MLT1L LTR MaLR -210 405 106 21 36 0 0 chr10 38646803 38646831 -101669934 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 38647994 38648027 -101668738 + (T)n Simple_repeat Simple_repeat 1 33 0 203 283 98 22 chr10 38648459 38648551 -101668214 - MIR3 SINE MIR -5 203 105 182 389 0 0 chr10 38648782 38648854 -101667911 + L2 LINE L2 3187 3258 -14 407 278 71 114 chr10 38649318 38649573 -101667192 + MIR SINE MIR 10 253 -9 858 175 0 0 chr10 38651679 38651805 -101664960 + FLAM_C SINE Alu 1 126 -17 23 33 0 0 chr10 38651805 38651835 -101664930 + AT_rich Low_complexity Low_complexity 1 30 0 253 259 0 0 chr10 38652002 38652060 -101664705 - L2 LINE L2 0 3313 3256 471 206 62 0 chr10 38652453 38652550 -101664215 - MER5A DNA MER1_type -83 106 4 332 224 28 47 chr10 38652592 38652699 -101664066 + L1MC4 LINE L1 6598 6702 -1340 223 85 43 0 chr10 38652706 38652753 -101664012 + (TA)n Simple_repeat Simple_repeat 1 49 0 1009 280 91 26 chr10 38653130 38653626 -101663139 + L1MEd LINE L1 499 1026 -5093 582 313 14 10 chr10 38653916 38654124 -101662641 - MIR SINE MIR -13 249 41 250 329 112 0 chr10 38654727 38654870 -101661895 + L2 LINE L2 2543 2701 -613 5585 158 26 2 chr10 38654878 38655846 -101660919 - L1MC1 LINE L1 -5 6328 5338 430 326 139 0 chr10 38655864 38656079 -101660686 + L2 LINE L2 2691 2935 -379 263 268 113 52 chr10 38656088 38656185 -101660580 - MER96 DNA MER1_type? -24 151 49 445 187 121 0 chr10 38656186 38656277 -101660488 + MER96 DNA MER1_type? 25 126 -49 559 79 13 0 chr10 38656277 38656353 -101660412 + MADE1 DNA Mariner 1 77 -3 243 183 0 0 chr10 38657220 38657267 -101659498 + (TG)n Simple_repeat Simple_repeat 2 51 -10 3992 174 63 19 chr10 38657267 38658094 -101658671 - MER21B LTR ERV1 0 863 1 243 183 0 0 chr10 38658094 38658106 -101658659 + (TG)n Simple_repeat Simple_repeat 50 61 0 439 125 0 0 chr10 38658188 38658252 -101658513 + AluS SINE Alu 1 64 -248 4354 91 0 13 chr10 38658254 38658879 -101657886 + L1P LINE L1 4655 5271 -875 1804 215 94 20 chr10 38658879 38659335 -101657430 + LTR2B LTR ERV1 1 490 0 6815 60 10 0 chr10 38659335 38660205 -101656560 + L1PA7 LINE L1 5268 6146 -8 1914 205 29 25 chr10 38660310 38660637 -101656128 - L1MD2 LINE L1 -8 6351 6020 1944 205 32 52 chr10 38660637 38661194 -101655571 - LTR55 LTR ERV -2 546 1 1914 205 29 25 chr10 38661194 38661310 -101655455 - L1MD2 LINE L1 -339 6020 5906 1016 189 16 21 chr10 38661313 38661504 -101655261 - AluJo SINE Alu -36 276 87 2026 211 14 50 chr10 38661507 38661727 -101655038 - L1MD2 LINE L1 -337 5905 5679 2227 106 3 0 chr10 38661727 38662028 -101654737 + AluY SINE Alu 1 302 -9 2026 211 14 50 chr10 38662028 38662290 -101654475 - L1MD2 LINE L1 -563 5679 5440 7921 216 47 38 chr10 38662305 38663520 -101653245 - L1MC1 LINE L1 -6 6327 5124 1540 92 10 10 chr10 38663520 38663727 -101653038 + AluSc SINE Alu 84 290 -19 7921 216 47 38 chr10 38663727 38664323 -101652442 - L1MC1 LINE L1 -1209 5124 4535 2302 98 3 0 chr10 38664323 38664629 -101652136 - AluSg SINE Alu -3 307 1 7921 216 47 38 chr10 38664629 38666584 -101650181 - L1MC1 LINE L1 -1798 4535 2530 242 56 28 0 chr10 38667505 38667541 -101649224 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2017 101 0 35 chr10 38667544 38667831 -101648934 - AluSc SINE Alu -32 277 1 194 418 0 0 chr10 38668225 38668292 -101648473 - L2 LINE L2 -73 3199 3133 214 364 131 30 chr10 38668501 38669026 -101647739 - L2 LINE L2 -389 2925 2348 201 147 0 0 chr10 38669316 38669350 -101647415 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 204 182 0 102 chr10 38669364 38669452 -101647313 + T-rich Low_complexity Low_complexity 4 82 0 370 295 33 87 chr10 38670107 38670348 -101646417 + MIR SINE MIR 35 262 0 325 317 137 0 chr10 38670338 38670521 -101646244 - MIR SINE MIR -6 256 49 * 250 241 58 35 chr10 38671395 38671482 -101645283 + MIR SINE MIR 23 111 -151 807 122 0 0 chr10 38671499 38671614 -101645151 - AluSx SINE Alu -2 308 194 1095 95 0 7 chr10 38671615 38671762 -101645003 - AluSx SINE Alu -166 146 1 266 253 63 0 chr10 38672546 38672625 -101644140 + MER58 DNA MER1_type 7 90 -2330 1632 93 9 0 chr10 38673724 38673940 -101642825 - AluSp SINE Alu -12 301 84 222 338 133 27 chr10 38675025 38675288 -101641477 + L2 LINE L2 2497 2787 -527 261 318 62 82 chr10 38675451 38675806 -101640959 + L2 LINE L2 2923 3270 -2 554 239 210 0 chr10 38676122 38676289 -101640476 + L2 LINE L2 3111 3312 -1 22 35 0 0 chr10 38676392 38676421 -101640344 + AT_rich Low_complexity Low_complexity 1 29 0 1916 113 0 77 chr10 38676474 38676785 -101639980 - AluY SINE Alu -24 287 1 264 270 61 35 chr10 38677036 38677151 -101639614 - LTR33 LTR ERVL 0 521 404 332 347 56 7 chr10 38677165 38677309 -101639456 + MIR SINE MIR 2 152 -110 318 267 48 9 chr10 38677414 38677519 -101639246 + MIR SINE MIR 148 256 -6 218 250 0 18 chr10 38677524 38677580 -101639185 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1653 312 50 17 chr10 38677608 38678695 -101638070 - L1 LINE L1 -1717 4429 3280 313 48 0 0 chr10 38678697 38678739 -101638026 - AluSp/q SINE Alu -10 293 252 284 285 108 38 chr10 38678765 38678923 -101637842 - MLT1C LTR MaLR -79 388 220 21 0 0 0 chr10 38679243 38679264 -101637501 + AT_rich Low_complexity Low_complexity 1 21 0 2102 78 7 18 chr10 38679506 38679810 -101636955 - AluY SINE Alu 0 301 1 2193 120 3 0 chr10 38680124 38680432 -101636333 - AluSp SINE Alu -4 309 1 371 288 81 54 chr10 38680556 38680851 -101635914 - L1MEc LINE L1 -910 1580 1286 578 209 0 0 chr10 38680865 38680970 -101635795 - FLAM_A SINE Alu -13 129 25 412 329 20 14 chr10 38681076 38681222 -101635543 - L1MEc LINE L1 -5031 1088 942 274 206 59 10 chr10 38681233 38681335 -101635430 + (TA)n Simple_repeat Simple_repeat 2 108 0 263 214 54 0 chr10 38681390 38681446 -101635319 - MLT1G1 LTR MaLR -72 523 465 608 269 68 29 chr10 38681454 38681724 -101635041 - MLT1G1 LTR MaLR -279 316 11 437 387 29 40 chr10 38683276 38683625 -101633140 + L2 LINE L2 2435 2779 -535 182 292 125 61 chr10 38683936 38684081 -101632684 - MIR3 SINE MIR -50 158 4 793 305 45 27 chr10 38684131 38684454 -101632311 - LTR16A LTR ERVL 0 457 127 412 270 40 31 chr10 38684894 38685116 -101631649 - L1MEc LINE L1 -4646 1750 1527 257 294 20 20 chr10 38685124 38685226 -101631539 - LTR16A LTR ERVL -318 132 31 1326 190 3 100 chr10 38686390 38686721 -101630044 + AluJo SINE Alu 1 299 -13 279 331 73 20 chr10 38687355 38687506 -101629259 + L2 LINE L2 2926 3084 -188 285 285 132 28 chr10 38687847 38687991 -101628774 + MIR3 SINE MIR 34 192 -16 2129 99 9 49 chr10 38688427 38688809 -101627956 - AluSx SINE Alu 0 369 1 21 36 0 0 chr10 38688858 38688886 -101627879 + AT_rich Low_complexity Low_complexity 1 28 0 279 236 27 27 chr10 38689004 38689114 -101627651 + CT-rich Low_complexity Low_complexity 3 112 0 483 368 53 10 chr10 38689854 38690158 -101626607 - L1MC4a LINE L1 -1906 5902 5586 3432 254 83 36 chr10 38690158 38692899 -101623866 + L1MB1 LINE L1 6 2277 -3693 284 219 14 14 chr10 38692922 38692995 -101623770 + Tigger5 DNA MER2_type 2251 2323 0 397 219 12 0 chr10 38693050 38693132 -101623633 + Tigger5 DNA MER2_type 2238 2320 -3 9988 203 49 53 chr10 38693133 38693713 -101623052 + L1MB1 LINE L1 2272 2853 -3139 666 235 0 0 chr10 38693713 38693828 -101622937 + FLAM_A SINE Alu 5 119 -14 522 31 0 0 chr10 38693828 38693892 -101622873 + (CA)n Simple_repeat Simple_repeat 2 65 0 9988 203 49 53 chr10 38693892 38694468 -101622297 + L1MB1 LINE L1 2852 3429 -2563 2202 55 7 58 chr10 38694468 38694777 -101621988 + AluY SINE Alu 1 293 -18 9988 203 49 53 chr10 38694777 38694938 -101621827 + L1MB1 LINE L1 3429 3589 -2403 2656 93 8 8 chr10 38694938 38695313 -101621452 - THE1C LTR MaLR 0 375 1 9988 203 49 53 chr10 38695313 38695892 -101620873 + L1MB1 LINE L1 3589 4169 -1823 444 84 127 0 chr10 38695892 38695963 -101620802 - MADE1 DNA Mariner 0 80 1 9988 203 49 53 chr10 38695963 38697083 -101619682 + L1MB1 LINE L1 4169 5268 -724 368 132 0 38 chr10 38697083 38697189 -101619576 + (TTATA)n Simple_repeat Simple_repeat 5 106 0 3677 162 23 4 chr10 38697207 38697944 -101618821 + L1MB1 LINE L1 5267 6016 0 827 153 8 0 chr10 38699882 38700013 -101616752 + FLAM_A SINE Alu 1 132 -1 731 246 18 1 chr10 38700160 38700212 -101616553 + MER58 DNA MER1_type 1 51 -2369 203 0 0 36 chr10 38700212 38700240 -101616525 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 731 246 18 1 chr10 38700240 38700480 -101616285 + MER58 DNA MER1_type 51 2418 -2 4769 187 80 62 chr10 38700917 38702039 -101614726 + Charlie1a DNA MER1_type 7 1160 -1601 1838 70 0 0 chr10 38702039 38702268 -101614497 + AluY SINE Alu 1 229 -82 4769 187 80 62 chr10 38702268 38702520 -101614245 + Charlie1a DNA MER1_type 1160 1406 -49 4522 150 11 5 chr10 38702526 38704059 -101612706 - L1PA13 LINE L1 -2 6161 4536 7753 156 12 3 chr10 38704059 38704638 -101612127 + L1P LINE L1 3107 3679 -2467 210 71 0 0 chr10 38704638 38704666 -101612099 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7753 156 12 3 chr10 38704666 38705463 -101611302 + L1P LINE L1 3679 4489 -1657 1084 77 0 0 chr10 38705719 38705874 -101610891 + L1PB4 LINE L1 4357 4511 -1635 5243 132 23 0 chr10 38705885 38705897 -101610868 + L1PB4 LINE L1 5176 5186 -970 2305 116 0 0 chr10 38705897 38706199 -101610566 + AluSg SINE Alu 1 302 -8 5243 132 23 0 chr10 38706199 38707149 -101609616 + L1PB4 LINE L1 5186 6155 -1 1097 160 11 0 chr10 38707542 38707723 -101609042 + AluSg/x SINE Alu 129 311 -1 21 36 0 0 chr10 38708270 38708298 -101608467 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 38709594 38709631 -101607134 + AT_rich Low_complexity Low_complexity 1 37 0 266 148 19 0 chr10 38710124 38710178 -101606587 + CT-rich Low_complexity Low_complexity 1 55 0 * 674 210 0 22 chr10 38710172 38710353 -101606412 + C-rich Low_complexity Low_complexity 2 178 0 24 67 0 0 chr10 38710598 38710643 -101606122 + AT_rich Low_complexity Low_complexity 1 45 0 216 67 0 0 chr10 38711265 38711295 -101605470 + (GA)n Simple_repeat Simple_repeat 2 31 0 335 305 11 0 chr10 38712348 38712443 -101604322 - MIR SINE MIR -147 115 20 2368 94 3 0 chr10 38712470 38712778 -101603987 - AluSp SINE Alu -4 309 1 437 319 62 0 chr10 38713414 38713640 -101603125 - HAL1 LINE L1 -856 1651 1412 217 366 93 21 chr10 38714032 38714549 -101602216 + L2 LINE L2 1260 1813 -1501 237 111 61 30 chr10 38714549 38714648 -101602117 + (TA)n Simple_repeat Simple_repeat 1 102 0 499 312 80 35 chr10 38714674 38715049 -101601716 - L1MC4a LINE L1 -1916 5892 5501 746 320 86 46 chr10 38715064 38715777 -101600988 + L2 LINE L2 2033 2773 -541 419 375 113 17 chr10 38715857 38716148 -101600617 + L2 LINE L2 2936 3254 -18 331 299 42 24 chr10 38716717 38716884 -101599881 - MIR SINE MIR -56 206 37 845 289 22 4 chr10 38717386 38717614 -101599151 + MIR SINE MIR 3 234 -28 1563 137 50 8 chr10 38717665 38717927 -101598838 + MER46B DNA MER2_type 1 148 -88 1929 184 9 0 chr10 38717931 38718273 -101598492 + MER7A DNA MER2_type 2 344 -2 288 170 0 0 chr10 38718279 38718332 -101598433 + (CA)n Simple_repeat Simple_repeat 2 54 0 555 211 18 0 chr10 38718336 38718450 -101598315 + Tigger3(Golem) DNA MER2_type 2911 3026 -3 474 113 75 0 chr10 38718453 38718533 -101598232 + MER46B DNA MER2_type 151 236 0 305 238 200 0 chr10 38720207 38720287 -101596478 + MER5A DNA MER1_type 17 112 -77 315 169 31 31 chr10 38720318 38720383 -101596382 + L2 LINE L2 3238 3302 -11 21 0 0 0 chr10 38721426 38721447 -101595318 + AT_rich Low_complexity Low_complexity 1 21 0 2207 116 0 0 chr10 38721525 38721818 -101594947 + AluSp SINE Alu 1 293 -20 2468 181 3 4 chr10 38721913 38722447 -101594318 - L1P LINE L1 -733 5428 4895 4704 124 6 11 chr10 38722448 38723174 -101593591 + L1PA15 LINE L1 5438 6159 -6 760 188 117 132 chr10 38723179 38723588 -101593177 - MER57A LTR ERV1 0 403 1 27 29 0 0 chr10 38723881 38723915 -101592850 + AT_rich Low_complexity Low_complexity 1 34 0 1403 179 33 100 chr10 38724227 38724618 -101592147 + MLT1A1 LTR MaLR 1 365 0 450 336 26 39 chr10 38724631 38724863 -101591902 - MIR SINE MIR -12 250 22 222 380 94 69 chr10 38725066 38725384 -101591381 - L2 LINE L2 -10 3262 2937 1006 223 18 108 chr10 38725830 38726229 -101590536 - MLT1A1 LTR MaLR 0 365 3 24 53 0 0 chr10 38726309 38726347 -101590418 + AT_rich Low_complexity Low_complexity 1 38 0 434 328 78 15 chr10 38726347 38726551 -101590214 - MIR SINE MIR 0 262 46 484 42 14 14 chr10 38728655 38728727 -101588038 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 300 288 8 34 chr10 38729024 38729142 -101587623 + HAL1 LINE L1 9 123 -2384 376 342 74 10 chr10 38729731 38729933 -101586832 + HAL1 LINE L1 738 952 -1555 315 161 0 0 chr10 38729935 38729991 -101586774 + GA-rich Low_complexity Low_complexity 1 56 0 1263 173 79 0 chr10 38730021 38730275 -101586490 - L1M3 LINE L1 -538 5630 5357 1016 292 81 29 chr10 38730356 38730949 -101585816 + HAL1 LINE L1 1087 1710 -797 317 234 122 20 chr10 38730954 38731151 -101585614 + L1ME2 LINE L1 2983 3199 -2947 22 70 0 0 chr10 38731200 38731243 -101585522 + AT_rich Low_complexity Low_complexity 1 43 0 308 230 20 30 chr10 38731316 38731416 -101585349 + L1ME2 LINE L1 3442 3540 -2606 496 274 147 81 chr10 38731492 38731927 -101584838 - MLT1H1 LTR MaLR 0 550 86 3734 252 86 22 chr10 38731999 38734285 -101582480 + L1ME2 LINE L1 3656 6079 -85 524 263 121 42 chr10 38734414 38734754 -101582011 + MLT1G LTR MaLR 180 584 -6 238 162 0 0 chr10 38735537 38735574 -101581191 + Alu SINE Alu 84 120 -182 2331 135 0 0 chr10 38737069 38737409 -101579356 + L1PA8A LINE L1 4 343 -5532 7281 114 20 2 chr10 38737409 38739262 -101577503 + L1PA8A LINE L1 4553 6426 -20 216 0 0 0 chr10 38739262 38739286 -101577479 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7281 114 20 2 chr10 38739286 38739308 -101577457 + L1PA8A LINE L1 6426 6446 0 545 271 39 30 chr10 38739501 38739704 -101577061 - MIR SINE MIR -5 257 53 610 193 6 28 chr10 38739954 38740135 -101576630 + GA-rich Low_complexity Low_complexity 3 179 0 23 33 0 0 chr10 38741211 38741241 -101575524 + AT_rich Low_complexity Low_complexity 1 30 0 2042 78 88 7 chr10 38745112 38745395 -101571370 + AluY SINE Alu 1 306 -5 22 0 0 0 chr10 38747287 38747309 -101569456 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 38747860 38747891 -101568874 + AT_rich Low_complexity Low_complexity 1 31 0 2108 200 21 34 chr10 38748006 38748537 -101568228 - L1MA8 LINE L1 -22 7688 7165 * 2260 147 50 28 chr10 38748505 38748969 -101567796 - L1MA8 LINE L1 -935 6630 6157 * 2287 230 58 34 chr10 38748966 38749257 -101567508 - L1MA8 LINE L1 -3710 3855 3573 1471 124 0 0 chr10 38749257 38749458 -101567307 - AluSg/x SINE Alu -19 293 93 2287 230 58 34 chr10 38749458 38750209 -101566556 - L1MA8 LINE L1 -3992 3573 2781 415 288 22 0 chr10 38750212 38750362 -101566403 - L1M3d LINE L1 -4518 2509 2357 * 16102 160 25 28 chr10 38750359 38753798 -101562967 - L1MA3 LINE L1 -4 7720 4272 1994 98 4 7 chr10 38753798 38754072 -101562693 - AluSc SINE Alu -36 273 1 16102 160 25 28 chr10 38754072 38755279 -101561486 - L1MA3 LINE L1 -3452 4272 3063 2206 120 0 3 chr10 38755279 38755579 -101561186 + AluSx SINE Alu 3 301 -11 16102 160 25 28 chr10 38755579 38756507 -101560258 - L1MA3 LINE L1 -4661 3063 2134 3487 139 40 11 chr10 38756507 38757134 -101559631 - L1MA4 LINE L1 -3 6297 5653 4158 37 0 0 chr10 38757135 38757627 -101559138 - L1PA3 LINE L1 -1 6154 5663 16102 160 25 28 chr10 38757627 38758072 -101558693 - L1MA3 LINE L1 -5590 2134 1689 186 43 0 0 chr10 38758072 38758095 -101558670 + (TC)n Simple_repeat Simple_repeat 2 24 0 16102 160 25 28 chr10 38758095 38759767 -101556998 - L1MA3 LINE L1 -6035 1689 14 973 242 25 12 chr10 38759790 38760140 -101556625 - L1M3d LINE L1 -4828 2209 1844 1534 261 32 50 chr10 38760224 38760809 -101555956 - L1M3d LINE L1 -6449 581 7 705 232 163 11 chr10 38761851 38762041 -101554724 - MER58A DNA MER1_type -5 219 1 206 277 40 59 chr10 38762130 38762231 -101554534 - MIR SINE MIR 0 262 164 2172 124 19 35 chr10 38762275 38762645 -101554120 - THE1B LTR MaLR 0 364 1 1123 221 43 50 chr10 38762676 38762979 -101553786 - AluJo SINE Alu -1 301 1 1648 168 10 49 chr10 38763173 38763477 -101553288 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr10 38764070 38764091 -101552674 + AT_rich Low_complexity Low_complexity 1 21 0 236 263 105 0 chr10 38767437 38767513 -101549252 - L2 LINE L2 -2 3270 3187 198 0 0 0 chr10 38767679 38767701 -101549064 + (TG)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr10 38768752 38768776 -101547989 + AT_rich Low_complexity Low_complexity 1 24 0 790 332 84 17 chr10 38769095 38769626 -101547139 - L2 LINE L2 0 3313 2749 562 299 49 0 chr10 38769649 38769813 -101546952 - MER58A DNA MER1_type -12 212 41 311 299 39 24 chr10 38769819 38769946 -101546819 + L1M3c LINE L1 176 304 -6009 2162 237 45 78 chr10 38770273 38770941 -101545824 + L1M3c LINE L1 803 1301 -5034 2130 110 10 10 chr10 38770941 38771242 -101545523 + AluSq SINE Alu 1 301 -12 2162 237 45 78 chr10 38771242 38771721 -101545044 + L1M3c LINE L1 1301 1794 -4541 352 240 0 1 chr10 38771737 38771830 -101544935 - MER33 DNA MER1_type -250 74 1 254 363 67 7 chr10 38772030 38772165 -101544600 - MIR SINE MIR -119 143 1 4578 219 56 32 chr10 38772195 38773617 -101543148 + Charlie1a DNA MER1_type 1 1455 0 194 383 12 0 chr10 38774025 38774106 -101542659 - L2 LINE L2 -5 3267 3186 23 33 0 0 chr10 38775157 38775187 -101541578 + AT_rich Low_complexity Low_complexity 1 30 0 286 302 107 39 chr10 38776684 38776825 -101539940 + MIR3 SINE MIR 79 205 -3 249 33 0 0 chr10 38777373 38777403 -101539362 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1472 173 44 4 chr10 38777406 38777654 -101539111 - AluJo SINE Alu -31 281 24 252 86 0 0 chr10 38777702 38777737 -101539028 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 284 25 25 chr10 38777755 38777836 -101538929 - MIR SINE MIR -136 126 46 265 279 85 79 chr10 38778226 38778391 -101538374 + L2 LINE L2 1731 1896 -1418 396 243 229 9 chr10 38778551 38778769 -101537996 - MLT1I LTR MaLR -52 357 92 512 198 10 0 chr10 38779227 38779328 -101537437 + MIR SINE MIR 124 225 -37 23 54 0 0 chr10 38779414 38779451 -101537314 + AT_rich Low_complexity Low_complexity 1 37 0 390 333 47 12 chr10 38779519 38779690 -101537075 - MIR3 SINE MIR -11 197 21 7503 28 0 9 chr10 38780655 38782320 -101534445 + L1PA3 LINE L1 4485 6140 -15 231 36 0 0 chr10 38782323 38782351 -101534414 + (TAA)n Simple_repeat Simple_repeat 3 30 0 912 250 119 81 chr10 38783214 38783734 -101533031 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr10 38783740 38783761 -101533004 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr10 38783936 38783965 -101532800 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 2448 64 0 3 chr10 38784239 38784535 -101532230 - AluY SINE Alu -16 295 1 272 172 17 0 chr10 38784564 38784622 -101532143 + (TATG)n Simple_repeat Simple_repeat 2 60 0 317 215 0 76 chr10 38784700 38784779 -101531986 + Tigger3(Golem) DNA MER2_type 9 81 -2948 299 95 0 0 chr10 38784828 38784870 -101531895 - AluSg/x SINE Alu -127 175 134 2276 70 0 20 chr10 38784870 38785172 -101531593 - AluY SINE Alu -15 296 1 1436 116 71 22 chr10 38785176 38785443 -101531322 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 243 0 0 0 chr10 38786323 38786350 -101530415 + (TG)n Simple_repeat Simple_repeat 2 28 0 319 324 22 15 chr10 38786384 38786520 -101530245 - LTR16A LTR ERVL -53 397 261 477 171 0 11 chr10 38786555 38786643 -101530122 - L1MCa LINE L1 -5762 664 578 2128 229 53 43 chr10 38786708 38787250 -101529515 - L1MCa LINE L1 -5786 640 90 2493 68 7 0 chr10 38787250 38787559 -101529206 - AluY SINE Alu 0 311 1 2128 229 53 43 chr10 38787559 38787615 -101529150 - L1MCa LINE L1 -6336 90 36 1981 193 0 48 chr10 38787739 38788154 -101528611 + MSTD LTR MaLR 1 395 -1 801 368 28 0 chr10 38788223 38788688 -101528077 - HERV16 LTR ERVL -3604 1392 915 458 361 72 13 chr10 38788827 38789132 -101527633 - HERV16 LTR ERVL -4339 657 335 2328 99 0 10 chr10 38789314 38789618 -101527147 + AluY SINE Alu 1 301 -10 731 287 116 59 chr10 38789778 38790182 -101526583 + LTR16A LTR ERVL 1 427 -30 257 275 75 44 chr10 38790200 38790360 -101526405 - LTR16A1 LTR ERVL -48 409 245 2220 116 0 13 chr10 38790505 38790816 -101525949 - AluSx SINE Alu 0 312 6 503 214 15 53 chr10 38791007 38791213 -101525552 - L1P LINE L1 -2893 3253 3056 2126 230 20 36 chr10 38791287 38791927 -101524838 - L1P LINE L1 -3073 3073 2444 2156 122 0 3 chr10 38792614 38792908 -101523857 - AluSg SINE Alu -17 293 1 835 269 72 54 chr10 38792920 38793336 -101523429 - L1MEc LINE L1 -4543 1853 1446 1898 151 34 0 chr10 38793336 38793458 -101523307 + AluSx SINE Alu 1 117 -195 387 0 0 0 chr10 38793458 38793501 -101523264 + (CA)n Simple_repeat Simple_repeat 2 44 0 1898 151 34 0 chr10 38793501 38793670 -101523095 + AluSx SINE Alu 117 302 -10 835 269 72 54 chr10 38793670 38794210 -101522555 - L1MEc LINE L1 -4950 1446 880 1595 114 160 8 chr10 38794431 38794693 -101522072 + AluSg1 SINE Alu 1 302 -7 320 326 42 26 chr10 38794888 38795081 -101521684 - L1MEc LINE L1 -6061 335 140 39 60 0 0 chr10 38795294 38795361 -101521404 + AT_rich Low_complexity Low_complexity 1 67 0 1507 18 0 0 chr10 38795406 38795573 -101521192 - AluYb8 SINE Alu -5 313 147 919 184 70 66 chr10 38795574 38795802 -101520963 - AluJo SINE Alu -66 246 18 5308 128 11 8 chr10 38796060 38796971 -101519794 - L1MA2 LINE L1 -97 6207 5294 948 181 5 51 chr10 38796969 38797185 -101519580 - L1MA2 LINE L1 -1977 4169 3964 * 1597 236 8 21 chr10 38797183 38797667 -101519098 - L1P LINE L1 -3699 2447 1970 2859 125 45 0 chr10 38797675 38798146 -101518619 + L1PA15 LINE L1 5672 6163 -2 1785 143 38 58 chr10 38798272 38798637 -101518128 + MLT2D LTR ERVL 1 358 -56 198 71 0 0 chr10 38798650 38798678 -101518087 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 291 71 0 0 chr10 38798678 38798720 -101518045 + (TG)n Simple_repeat Simple_repeat 1 42 0 346 282 107 0 chr10 38798723 38798826 -101517939 - L1MCa LINE L1 -5020 1406 1293 2117 102 32 11 chr10 38798864 38799149 -101517616 - AluY SINE Alu -20 291 1 282 95 0 0 chr10 38799198 38799240 -101517525 - U3 snRNA snRNA -175 42 1 484 329 43 30 chr10 38799387 38799715 -101517050 + L1ME3A LINE L1 1905 2236 -4160 566 263 44 10 chr10 38799720 38800017 -101516748 + L1ME3A LINE L1 2340 2646 -3569 701 331 68 27 chr10 38800021 38800434 -101516331 + L1ME3A LINE L1 5576 6023 -216 2274 93 3 13 chr10 38800434 38800735 -101516030 - AluSg SINE Alu -12 298 1 701 331 68 27 chr10 38800735 38800922 -101515843 + L1ME3A LINE L1 6023 6201 -38 2176 123 0 0 chr10 38801652 38801945 -101514820 - AluSx SINE Alu -16 296 4 2260 87 42 0 chr10 38801986 38802275 -101514490 - AluY SINE Alu -10 301 1 315 0 0 0 chr10 38803770 38803805 -101512960 + (CA)n Simple_repeat Simple_repeat 1 35 0 203 379 0 39 chr10 38804049 38804152 -101512613 - MIR3 SINE MIR -96 112 14 2275 176 69 5 chr10 38806756 38807189 -101509576 + LOR1b LTR ERV1 1 461 0 257 276 120 28 chr10 38807372 38807698 -101509067 - L1ME4a LINE L1 -110 6011 5656 394 304 77 28 chr10 38807819 38808000 -101508765 - MIR SINE MIR -11 251 62 1249 230 124 65 chr10 38808039 38808509 -101508256 + MER20B DNA MER1_type 44 570 -213 778 164 0 8 chr10 38808509 38808643 -101508122 + FLAM_C SINE Alu 1 133 0 1249 230 124 65 chr10 38808643 38808863 -101507902 + MER20B DNA MER1_type 570 775 -8 320 218 11 0 chr10 38809081 38809168 -101507597 + (GAATG)n Simple_repeat Simple_repeat 3 90 0 1696 159 75 3 chr10 38809477 38809811 -101506954 + MLT1A1 LTR MaLR 8 365 0 26 0 0 0 chr10 38810441 38810467 -101506298 + AT_rich Low_complexity Low_complexity 1 26 0 1149 223 100 47 chr10 38811202 38811766 -101504999 - L1ME2 LINE L1 -21 6212 5558 2339 100 3 0 chr10 38811766 38812065 -101504700 - AluSp SINE Alu -13 300 1 1149 223 100 47 chr10 38812065 38812090 -101504675 - L1ME2 LINE L1 -675 5558 5536 740 129 8 16 chr10 38812098 38812222 -101504543 + AluY SINE Alu 175 297 -14 1631 253 67 41 chr10 38812248 38812671 -101504094 - L1ME2 LINE L1 -3289 2926 2515 2395 65 0 3 chr10 38812671 38812963 -101503802 - AluY SINE Alu -20 291 1 1631 253 67 41 chr10 38812963 38813347 -101503418 - L1ME2 LINE L1 -3700 2515 2122 354 45 0 0 chr10 38813347 38813391 -101503374 + (TG)n Simple_repeat Simple_repeat 2 45 0 1631 253 67 41 chr10 38813391 38813606 -101503159 - L1ME2 LINE L1 -4093 2122 1914 261 0 0 0 chr10 38815641 38815670 -101501095 + (G)n Simple_repeat Simple_repeat 1 29 0 6164 71 0 0 chr10 38816131 38817206 -101499559 - L1PA5 LINE L1 -18 6136 5034 241 359 8 38 chr10 38817215 38817346 -101499419 + L2 LINE L2 2620 2746 -568 2280 85 0 31 chr10 38819454 38819772 -101496993 + AluY SINE Alu 1 308 -3 2348 62 7 10 chr10 38819779 38820087 -101496678 + AluY SINE Alu 1 307 -4 1699 191 24 0 chr10 38820328 38820621 -101496144 + AluJo SINE Alu 1 300 -12 234 150 0 0 chr10 38820890 38820930 -101495835 + (TA)n Simple_repeat Simple_repeat 2 41 0 203 182 55 0 chr10 38820977 38821032 -101495733 + (TA)n Simple_repeat Simple_repeat 1 58 0 330 113 0 0 chr10 38821169 38821231 -101495534 - L1MA7 LINE L1 -1 6290 6229 4284 243 69 55 chr10 38821231 38823320 -101493445 - L1 LINE L1 -2498 3536 1478 1742 123 97 8 chr10 38823320 38823588 -101493177 - AluSg SINE Alu -18 292 1 4284 243 69 55 chr10 38823588 38824095 -101492670 - L1 LINE L1 -4556 1478 980 1035 241 91 19 chr10 38824095 38824415 -101492350 - MER2 DNA MER2_type 0 344 2 4284 243 69 55 chr10 38824415 38825327 -101491438 - L1 LINE L1 -5054 980 359 250 310 151 26 chr10 38825577 38825848 -101490917 - L1M3a LINE L1 -5256 699 395 1159 315 10 12 chr10 38825939 38826352 -101490413 - L1M3a LINE L1 -5532 423 12 362 321 50 9 chr10 38826367 38826585 -101490180 - L1ME LINE L1 -5167 903 677 253 335 129 20 chr10 38826649 38826897 -101489868 + MLT1H LTR MaLR 38 312 -237 2265 43 7 4 chr10 38827147 38827463 -101489302 - AluY SINE Alu 0 317 1 192 97 0 0 chr10 38827865 38827896 -101488869 + (T)n Simple_repeat Simple_repeat 1 31 0 1849 183 21 3 chr10 38828136 38828524 -101488241 - L1MA6 LINE L1 0 6300 5906 2177 221 85 48 chr10 38828637 38829297 -101487468 + MLT1A1-int LTR MaLR 1052 1735 0 1592 221 22 3 chr10 38829297 38829655 -101487110 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr10 38830461 38830486 -101486279 + AT_rich Low_complexity Low_complexity 1 25 0 2358 79 3 7 chr10 38830990 38831294 -101485471 + AluY SINE Alu 1 303 -8 1377 272 10 36 chr10 38831852 38832345 -101484420 + L1ME1 LINE L1 5678 6157 -9 375 323 70 0 chr10 38832878 38833036 -101483729 - MIR SINE MIR -63 199 31 238 331 149 8 chr10 38833154 38833275 -101483490 - MIR3 SINE MIR -67 141 4 54 49 0 0 chr10 38834045 38834127 -101482638 + AT_rich Low_complexity Low_complexity 1 82 0 2300 84 0 3 chr10 38834635 38834931 -101481834 + AluSq SINE Alu 1 295 -18 381 303 133 0 chr10 38835582 38835747 -101481018 - MIR SINE MIR -27 235 49 209 229 21 0 chr10 38836115 38836163 -101480602 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 38836633 38836655 -101480110 + AT_rich Low_complexity Low_complexity 1 22 0 495 209 127 0 chr10 38837641 38837751 -101479014 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 38837768 38837961 -101478804 - L2 LINE L2 -584 2730 2531 2559 193 12 26 chr10 38837965 38838141 -101478624 + L1MB8 LINE L1 4966 5143 -1035 2331 67 40 3 chr10 38838141 38838439 -101478326 + AluY SINE Alu 1 309 -2 2559 193 12 26 chr10 38838439 38839087 -101477678 + L1MB8 LINE L1 5143 5773 -405 1350 110 0 0 chr10 38839101 38839283 -101477482 - AluSq SINE Alu -10 303 122 2176 111 0 7 chr10 38839286 38839593 -101477172 - AluY SINE Alu -5 306 2 1778 147 25 50 chr10 38839594 38839990 -101476775 + L1MB8 LINE L1 5788 6173 -5 2154 104 0 17 chr10 38840587 38840886 -101475879 + AluSq SINE Alu 1 294 -19 2417 28 41 0 chr10 38841139 38841429 -101475336 + AluY SINE Alu 1 302 -9 22 35 0 0 chr10 38842122 38842151 -101474614 + AT_rich Low_complexity Low_complexity 1 29 0 2392 48 42 0 chr10 38842259 38842548 -101474217 - AluY SINE Alu -10 301 1 418 319 59 20 chr10 38842572 38842776 -101473989 - MIR SINE MIR -17 245 34 329 224 3 12 chr10 38843146 38843256 -101473509 - L1ME LINE L1 -340 5781 5672 1949 271 61 53 chr10 38843384 38844320 -101472445 - L2 LINE L2 -232 3081 2130 204 344 0 0 chr10 38844459 38844523 -101472242 - MIR SINE MIR -142 120 57 196 296 130 31 chr10 38844742 38844904 -101471861 - MIR SINE MIR -6 256 79 232 306 8 91 chr10 38845112 38845233 -101471532 - MIR3 SINE MIR -97 111 1 2147 90 10 32 chr10 38845854 38846213 -101470552 + AluY SINE Alu 1 311 0 1345 171 98 24 chr10 38846405 38846692 -101470073 + AluJo SINE Alu 1 308 -4 2514 64 3 3 chr10 38846964 38847275 -101469490 + AluY SINE Alu 1 311 0 2104 117 0 13 chr10 38847294 38847592 -101469173 + AluSx SINE Alu 1 294 -18 402 294 71 0 chr10 38847836 38847962 -101468803 - MIR SINE MIR -6 256 122 279 0 0 0 chr10 38848420 38848451 -101468314 + (TG)n Simple_repeat Simple_repeat 1 31 0 439 326 54 22 chr10 38848828 38849012 -101467753 - MER115 DNA AcHobo -440 253 64 2680 177 41 0 chr10 38849647 38850211 -101466554 - L1MA4 LINE L1 -5 6295 5709 342 294 8 71 chr10 38850945 38851071 -101465694 - L2 LINE L2 0 3313 3196 2325 82 0 10 chr10 38851926 38852230 -101464535 + AluY SINE Alu 1 301 -10 2443 82 0 0 chr10 38853549 38853852 -101462913 - AluY SINE Alu -8 303 1 2237 75 0 0 chr10 38853860 38854217 -101462548 - AluY SINE Alu 0 359 3 602 236 165 6 chr10 38854462 38854644 -101462121 - MIR SINE MIR -10 252 42 508 317 32 5 chr10 38854687 38854873 -101461892 + MER69 DNA AcHobo 134 324 -2202 621 165 9 94 chr10 38855028 38855162 -101461603 + MER69 DNA AcHobo 2002 2113 -413 2301 78 20 3 chr10 38855162 38855468 -101461297 - AluY SINE Alu 0 311 1 621 165 9 94 chr10 38855468 38855545 -101461220 + MER69 DNA AcHobo 2113 2195 -331 1640 200 55 3 chr10 38855548 38855893 -101460872 + MLT1A1 LTR MaLR 1 363 -2 3948 228 26 17 chr10 38855893 38857206 -101459559 + MLT1A1-int LTR MaLR 3 1413 -322 1596 161 27 7 chr10 38857206 38857504 -101459261 + MLT1A1 LTR MaLR 62 365 0 271 218 167 29 chr10 38857575 38857749 -101459016 + MER69 DNA AcHobo 2264 2461 -65 334 148 11 34 chr10 38857813 38857901 -101458864 + GA-rich Low_complexity Low_complexity 1 86 0 459 260 81 8 chr10 38858491 38858614 -101458151 - L2 LINE L2 0 3313 3182 26 0 0 0 chr10 38859341 38859367 -101457398 + AT_rich Low_complexity Low_complexity 1 26 0 404 102 42 51 chr10 38859483 38859601 -101457164 + GA-rich Low_complexity Low_complexity 1 117 0 375 78 0 0 chr10 38859719 38859770 -101456995 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 1431 214 11 4 chr10 38859775 38860056 -101456709 - AluJo SINE Alu -25 287 5 2107 97 0 4 chr10 38860095 38860374 -101456391 + AluSg SINE Alu 1 278 -32 199 328 82 25 chr10 38860395 38860517 -101456248 + L2 LINE L2 3103 3231 -41 870 155 0 0 chr10 38862349 38862520 -101454245 + L1PA10 LINE L1 6007 6177 0 581 294 121 5 chr10 38862553 38862958 -101453807 + L1MC4a LINE L1 5531 5982 -1826 2276 44 3 44 chr10 38863053 38863375 -101453390 + AluY SINE Alu 1 310 0 2003 84 4 0 chr10 38863409 38863697 -101453068 + AluSp SINE Alu 35 323 0 678 226 29 0 chr10 38863777 38863914 -101452851 + FLAM_C SINE Alu 1 141 -2 893 176 19 0 chr10 38863926 38864085 -101452680 + AluJb SINE Alu 116 277 -35 261 0 0 0 chr10 38864086 38864115 -101452650 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 182 37 37 0 chr10 38864290 38864317 -101452448 + (GA)n Simple_repeat Simple_repeat 1 28 0 2215 100 0 44 chr10 38866669 38866988 -101449777 - AluSx SINE Alu -7 305 1 9690 146 21 10 chr10 38867309 38869037 -101447728 - Tigger1 DNA MER2_type 0 2418 672 3497 165 16 39 chr10 38869238 38869934 -101446831 - Tigger1 DNA MER2_type -1738 680 1 1744 189 41 15 chr10 38870691 38870765 -101446000 + MER7A DNA MER2_type 1 72 -2966 2293 87 0 3 chr10 38870765 38871063 -101445702 - AluY SINE Alu -14 297 1 1744 189 41 15 chr10 38871063 38871327 -101445438 + MER7A DNA MER2_type 72 346 0 266 292 83 17 chr10 38871862 38871982 -101444783 + MIR3 SINE MIR 44 171 -37 429 280 194 11 chr10 38872176 38872351 -101444414 - MIR SINE MIR -32 230 24 1218 280 129 35 chr10 38874239 38875039 -101441726 + L1ME3A LINE L1 5282 6156 -14 225 0 0 0 chr10 38878456 38878481 -101438284 + (T)n Simple_repeat Simple_repeat 1 25 0 2618 38 0 13 chr10 38878677 38878992 -101437773 - AluY SINE Alu 0 311 1 1360 205 18 21 chr10 38879549 38879832 -101436933 + AluJo SINE Alu 1 282 -30 1938 88 0 0 chr10 38881237 38881487 -101435278 + AluSq SINE Alu 1 250 -63 1433 189 39 4 chr10 38881604 38881885 -101434880 - AluJb SINE Alu -21 291 1 2094 105 14 3 chr10 38882451 38882737 -101434028 + AluSq SINE Alu 1 289 -24 350 132 19 0 chr10 38883733 38883786 -101432979 + AluS SINE Alu 232 285 -17 1776 144 7 7 chr10 38884134 38884412 -101432353 - AluSx SINE Alu -1 311 34 5123 55 0 10 chr10 38884412 38885105 -101431660 + L1P LINE L1 399 1084 -5062 * 8601 43 10 1 chr10 38885098 38886226 -101430539 + L1P LINE L1 1649 2786 -3360 1591 122 4 4 chr10 38886326 38886597 -101430168 + L1P LINE L1 4613 4883 -1263 231 182 0 0 chr10 38886596 38886640 -101430125 - L1ME LINE L1 -302 5933 5890 * 1109 246 157 18 chr10 38886645 38887096 -101429669 - LTR40a LTR ERVL -5 514 1 3916 247 53 47 chr10 38887101 38887598 -101429167 - L1ME LINE L1 -346 5889 5396 1618 161 15 15 chr10 38887598 38887872 -101428893 - AluJo SINE Alu 0 312 39 3916 247 53 47 chr10 38887872 38887905 -101428860 - L1ME LINE L1 -839 5396 5365 1316 185 87 96 chr10 38887905 38888375 -101428390 + MER31B LTR ERV1 1 466 0 3916 247 53 47 chr10 38888375 38888544 -101428221 - L1ME LINE L1 -870 5365 5198 2117 132 0 7 chr10 38888544 38888848 -101427917 - AluSx SINE Alu -10 302 1 3916 247 53 47 chr10 38888848 38889152 -101427613 - L1ME LINE L1 -1037 5198 4897 5023 117 60 18 chr10 38889152 38890488 -101426277 + L1PA15 LINE L1 4784 6158 -7 3916 247 53 47 chr10 38890488 38891719 -101425046 - L1ME LINE L1 -1338 4897 3640 2185 92 10 10 chr10 38891719 38892023 -101424742 - AluY SINE Alu -7 304 1 3916 247 53 47 chr10 38892023 38892123 -101424642 - L1ME LINE L1 -2595 3640 3542 586 313 182 14 chr10 38892245 38893025 -101423740 - L1ME LINE L1 -5350 1046 136 1641 200 50 64 chr10 38893045 38893545 -101423220 - MER82 DNA MER2_type 0 653 161 432 0 0 0 chr10 38894137 38894185 -101422580 + (TG)n Simple_repeat Simple_repeat 2 49 0 273 57 0 0 chr10 38894445 38894480 -101422285 + (TC)n Simple_repeat Simple_repeat 1 35 0 253 356 153 0 chr10 38896346 38896509 -101420256 - L3 LINE CR1 -114 1463 1276 26 30 0 0 chr10 38896518 38896551 -101420214 + AT_rich Low_complexity Low_complexity 1 33 0 585 219 0 0 chr10 38896552 38896675 -101420090 - MLT1A1 LTR MaLR -1 364 242 570 146 10 0 chr10 38896667 38896763 -101420002 - MLT1A1 LTR MaLR -236 129 33 * 366 323 111 5 chr10 38896771 38896969 -101419796 + L2 LINE L2 2234 2452 -862 1859 141 0 14 chr10 38896984 38897274 -101419491 - AluSx SINE Alu -26 286 1 255 287 82 49 chr10 38897390 38897512 -101419253 + L2 LINE L2 3179 3304 -9 180 125 0 0 chr10 38898678 38898710 -101418055 + (CA)n Simple_repeat Simple_repeat 1 32 0 785 272 26 0 chr10 38899454 38899649 -101417116 + MER63A DNA MER1_type 10 209 -1 2627 42 0 0 chr10 38899880 38900191 -101416574 + AluY SINE Alu 1 311 0 207 0 0 0 chr10 38900390 38900413 -101416352 + (A)n Simple_repeat Simple_repeat 1 23 0 495 209 127 0 chr10 38902676 38902786 -101413979 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 38902803 38902996 -101413769 - L2 LINE L2 -584 2730 2531 575 236 0 11 chr10 38903000 38903174 -101413591 + L1M4 LINE L1 4966 5137 -1009 2472 70 0 0 chr10 38903176 38903477 -101413288 + AluY SINE Alu 1 301 -10 19197 37 5 0 chr10 38904112 38906599 -101410166 + L1P LINE L1 1659 4157 -1989 731 237 218 34 chr10 38906851 38907363 -101409402 - MLT1G3 LTR MaLR -7 535 1 1145 191 22 119 chr10 38907638 38908042 -101408723 + MLT1A1 LTR MaLR 1 365 0 222 159 0 23 chr10 38908426 38908470 -101408295 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 183 235 0 0 chr10 38908543 38908594 -101408171 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 7019 40 0 0 chr10 38908605 38909701 -101407064 - L1PA5 LINE L1 0 6154 5034 241 359 8 38 chr10 38909710 38909841 -101406924 + L2 LINE L2 2620 2746 -568 349 363 51 39 chr10 39010784 39010974 -101305791 - L1ME4a LINE L1 -38 6083 5897 2313 101 0 0 chr10 39010974 39011281 -101305484 - AluSg SINE Alu -3 307 1 2148 132 0 0 chr10 39011283 39011593 -101305172 - AluSx SINE Alu -2 310 1 349 363 51 39 chr10 39011593 39011633 -101305132 - L1ME4a LINE L1 -224 5897 5847 337 232 20 10 chr10 39011848 39011947 -101304818 + L1MC4a LINE L1 5844 5943 -1865 1308 217 45 67 chr10 39011961 39012362 -101304403 + MLT1I LTR MaLR 16 407 -2 1782 126 49 7 chr10 39012463 39012749 -101304016 - AluSq SINE Alu -15 298 1 21 36 0 0 chr10 39012753 39012781 -101303984 + AT_rich Low_complexity Low_complexity 1 28 0 673 114 0 141 chr10 39012781 39012898 -101303867 + AluSg/x SINE Alu 182 275 -37 216 86 0 0 chr10 39012898 39012933 -101303832 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 673 114 0 141 chr10 39012933 39012964 -101303801 + AluSg/x SINE Alu 275 309 -3 533 161 0 11 chr10 39012970 39013057 -101303708 - FLAM_C SINE Alu -23 120 35 324 270 36 0 chr10 39013523 39013660 -101303105 - L1MC4 LINE L1 0 8042 7901 1898 132 0 65 chr10 39013666 39013788 -101302977 + AluJb SINE Alu 1 129 -183 320 0 25 0 chr10 39013788 39013828 -101302937 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1898 132 0 65 chr10 39013828 39014030 -101302735 + AluJb SINE Alu 129 304 -8 2267 95 7 3 chr10 39014031 39014335 -101302430 + AluSq SINE Alu 2 306 -7 484 95 0 0 chr10 39014335 39014398 -101302367 + Alu SINE Alu 2 64 -245 388 314 63 51 chr10 39014523 39014636 -101302129 - L1MC4 LINE L1 -306 7736 7619 2412 66 0 3 chr10 39014636 39014941 -101301824 - AluY SINE Alu -7 304 1 388 314 63 51 chr10 39014941 39015002 -101301763 - L1MC4 LINE L1 -423 7619 7560 881 99 41 0 chr10 39015040 39015161 -101301604 - FLAM_C SINE Alu -7 126 1 510 273 7 7 chr10 39015164 39015307 -101301458 - L1MC4 LINE L1 -454 7588 7446 1543 172 0 22 chr10 39015398 39015666 -101301099 - AluJo SINE Alu -50 262 1 415 129 0 0 chr10 39015666 39015728 -101301037 - MLT1B LTR MaLR -53 337 276 261 220 0 0 chr10 39015723 39015773 -101300992 - AluJ/monomer SINE Alu -251 50 1 * 311 193 12 24 chr10 39015773 39015856 -101300909 - L1MC4 LINE L1 -766 7276 7195 2055 129 20 0 chr10 39015856 39016150 -101300615 - AluSg SINE Alu -10 300 1 240 242 32 0 chr10 39016380 39016442 -101300323 - L1ME LINE L1 -299 5822 5759 5086 153 138 23 chr10 39016445 39017591 -101299174 - MER52C LTR ERV1 0 1278 1 231 317 20 0 chr10 39017591 39017692 -101299073 - L1ME LINE L1 -363 5758 5656 2300 97 3 0 chr10 39017693 39018002 -101298763 - AluSg SINE Alu 0 310 1 421 133 0 0 chr10 39018008 39018068 -101298697 - AluS SINE Alu -258 60 1 447 67 0 0 chr10 39018074 39018134 -101298631 - Alu SINE Alu -258 60 1 373 326 51 69 chr10 39018787 39018891 -101297874 + L2 LINE L2 2909 3010 -303 1942 133 0 42 chr10 39018891 39019200 -101297565 - AluSx SINE Alu -16 296 1 373 326 51 69 chr10 39019200 39019270 -101297495 + L2 LINE L2 3010 3080 -233 1796 95 0 4 chr10 39019270 39019511 -101297254 + AluSg SINE Alu 1 240 -70 1344 92 0 20 chr10 39019611 39019807 -101296958 - AluSx SINE Alu -120 192 1 244 335 38 65 chr10 39019932 39020133 -101296632 + L2 LINE L2 2545 2733 -581 2496 61 3 0 chr10 39020133 39020443 -101296322 + AluY SINE Alu 1 311 0 244 335 38 65 chr10 39020443 39020611 -101296154 + L2 LINE L2 2733 2904 -410 1348 167 0 0 chr10 39020664 39020886 -101295879 + AluJb SINE Alu 1 222 -90 449 129 0 0 chr10 39020986 39021048 -101295717 + AluS SINE Alu 231 292 -18 2079 92 6 60 chr10 39021061 39021376 -101295389 + AluSg SINE Alu 3 300 -10 1883 164 0 3 chr10 39021438 39021731 -101295034 - AluJb SINE Alu -14 298 7 275 278 0 33 chr10 39021753 39021843 -101294922 - MER81 DNA DNA -7 107 21 566 257 7 21 chr10 39021843 39021983 -101294782 + L2 LINE L2 3176 3313 0 951 181 5 27 chr10 39022227 39022415 -101294350 - AluJ SINE Alu 0 312 129 797 107 25 19 chr10 39022515 39022703 -101294062 - L1P LINE L1 -740 5411 5223 561 261 0 0 chr10 39022715 39022853 -101293912 - L1 LINE L1 -1137 5009 4872 252 141 0 84 chr10 39022857 39022928 -101293837 + MER21A LTR ERV1 861 925 -6 416 191 14 164 chr10 39022935 39023155 -101293610 + L2 LINE L2 3125 3311 -2 381 315 192 3 chr10 39023129 39023472 -101293293 - L2 LINE L2 -10 3303 2896 * 826 274 173 43 chr10 39023879 39024644 -101292121 + L2 LINE L2 2426 3310 -3 330 269 8 34 chr10 39024666 39024785 -101291980 + MIR SINE MIR 146 261 -1 287 258 52 21 chr10 39024833 39024930 -101291835 + MIR3 SINE MIR 55 154 -54 220 317 98 8 chr10 39024987 39025110 -101291655 - L2 LINE L2 -712 2602 2469 748 146 7 51 chr10 39025188 39025325 -101291440 - AluJ SINE Alu -181 131 1 2199 122 0 0 chr10 39025346 39025658 -101291107 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 39027155 39027177 -101289588 + GC_rich Low_complexity Low_complexity 1 22 0 189 317 169 48 chr10 39028487 39028736 -101288029 - L2 LINE L2 -415 2899 2621 2236 111 0 3 chr10 39029114 39029421 -101287344 - AluSg SINE Alu -4 306 1 2033 86 4 0 chr10 39029421 39029689 -101287076 - AluSp SINE Alu -12 301 32 1443 181 38 0 chr10 39029789 39030055 -101286710 + AluJo SINE Alu 25 300 -12 2021 89 4 4 chr10 39030667 39030937 -101285828 + AluSx SINE Alu 41 310 -2 730 153 9 0 chr10 39030943 39031054 -101285711 - FLAM_C SINE Alu -26 117 6 242 116 23 0 chr10 39031107 39031150 -101285615 + CT-rich Low_complexity Low_complexity 3 46 0 1121 186 9 28 chr10 39031153 39031368 -101285397 - AluJo SINE Alu -2 310 100 227 188 42 0 chr10 39031392 39031440 -101285325 - L1MB7 LINE L1 -32 6152 6103 782 245 78 5 chr10 39031463 39031667 -101285098 + MER20 DNA MER1_type 1 219 0 635 251 163 0 chr10 39033867 39034094 -101282671 - MLT1E1 LTR MaLR -13 641 378 390 195 40 1 chr10 39034121 39034281 -101282484 - MLT1E1 LTR MaLR -407 217 35 25 0 0 0 chr10 39034328 39034353 -101282412 + AT_rich Low_complexity Low_complexity 1 25 0 697 164 66 0 chr10 39034353 39034475 -101282290 + AluJo SINE Alu 1 130 -182 1056 191 68 38 chr10 39034907 39035200 -101281565 + MER21B LTR ERV1 13 314 -549 2163 103 0 0 chr10 39035203 39035516 -101281249 + AluSx SINE Alu 1 313 0 822 216 7 0 chr10 39035519 39035672 -101281093 + AluJo SINE Alu 137 290 -12 1764 171 7 0 chr10 39035672 39035952 -101280813 + AluSx SINE Alu 3 284 -28 788 253 61 7 chr10 39035982 39036278 -101280487 + L1MC4a LINE L1 5262 5573 -591 2162 112 3 3 chr10 39036453 39036756 -101280009 - AluSx SINE Alu -9 303 1 665 476 0 48 chr10 39036837 39037064 -101279701 - AluJo SINE Alu -94 218 3 309 310 26 26 chr10 39037072 39037227 -101279538 + L1MC4a LINE L1 5865 6019 -1789 2382 71 0 7 chr10 39037319 39037629 -101279136 + AluY SINE Alu 1 308 -3 2113 120 13 0 chr10 39037629 39037953 -101278812 + AluSq SINE Alu 1 313 0 382 297 77 45 chr10 39038035 39038190 -101278575 - L1MC4a LINE L1 -1834 5974 5815 1484 189 62 7 chr10 39038205 39038496 -101278269 + AluJo SINE Alu 1 307 -5 1592 178 0 7 chr10 39038501 39038770 -101277995 + AluJo SINE Alu 1 267 -45 844 101 0 8 chr10 39038772 39038901 -101277864 - AluSg/x SINE Alu -1 311 184 700 171 18 29 chr10 39039006 39039176 -101277589 + L1MB7 LINE L1 5994 6161 -23 248 329 32 71 chr10 39039266 39039549 -101277216 - L2 LINE L2 -474 2840 2569 2237 61 20 10 chr10 39039781 39040074 -101276691 + AluY SINE Alu 1 296 -15 1553 195 10 7 chr10 39040077 39040375 -101276390 + AluJo SINE Alu 1 299 -13 559 218 19 21 chr10 39041053 39041208 -101275557 - MIR SINE MIR -65 143 41 207 236 139 0 chr10 39041317 39041389 -101275376 - L2 LINE L2 -29 3284 3203 498 213 47 31 chr10 39041415 39041542 -101275223 - MIR SINE MIR -122 140 12 446 253 120 0 chr10 39041601 39041759 -101275006 - L1M4c LINE L1 -4787 1597 1421 1870 122 0 7 chr10 39042273 39042544 -101274221 + AluSx SINE Alu 20 288 -24 923 146 39 63 chr10 39043415 39043620 -101273145 - AluJo SINE Alu -47 265 66 245 212 126 86 chr10 39045806 39045957 -101270808 - MIR SINE MIR -75 187 31 314 313 0 0 chr10 39047107 39047190 -101269575 + L2 LINE L2 3230 3312 -1 23 68 0 0 chr10 39048554 39048598 -101268167 + GC_rich Low_complexity Low_complexity 1 44 0 57 61 0 0 chr10 39048868 39048967 -101267798 + GC_rich Low_complexity Low_complexity 1 99 0 210 270 7 36 chr10 39049147 39049284 -101267481 + GA-rich Low_complexity Low_complexity 3 135 0 1759 159 0 34 chr10 39049439 39049760 -101267005 - AluJb SINE Alu 0 312 3 541 248 7 35 chr10 39049767 39049908 -101266857 - MIR SINE MIR -70 192 56 192 346 144 0 chr10 39050441 39050545 -101266220 + L2 LINE L2 3138 3256 -16 411 158 18 18 chr10 39050563 39050677 -101266088 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 654 211 35 6 chr10 39050780 39051101 -101265664 + (TGGA)n Simple_repeat Simple_repeat 1 330 0 306 271 25 34 chr10 39051356 39051474 -101265291 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 672 234 5 58 chr10 39051477 39051551 -101265214 + MER105 DNA DNA 6 82 -122 2389 81 3 0 chr10 39051551 39051858 -101264907 - AluSp SINE Alu -5 308 1 672 234 5 58 chr10 39051858 39051988 -101264777 + MER105 DNA DNA 82 199 -5 965 181 0 23 chr10 39052087 39052258 -101264507 + AluSg/x SINE Alu 133 299 -11 2316 88 0 0 chr10 39052270 39052564 -101264201 + AluSx SINE Alu 1 294 -18 268 199 39 66 chr10 39052569 39052750 -101264015 + (CGGGA)n Simple_repeat Simple_repeat 3 178 0 800 130 0 0 chr10 39053041 39053156 -101263609 - AluJo SINE Alu -41 271 157 577 142 42 67 chr10 39053160 39053280 -101263485 - AluJo SINE Alu -195 117 1 322 303 7 21 chr10 39053280 39053425 -101263340 + CT-rich Low_complexity Low_complexity 2 144 0 357 306 75 45 chr10 39054028 39054410 -101262355 - LTR16B LTR ERVL 0 464 8 243 245 0 0 chr10 39054814 39054876 -101261889 + CT-rich Low_complexity Low_complexity 1 62 0 611 108 47 7 chr10 39055548 39055985 -101260780 + MSR1 Satellite Satellite 1 454 -30 2117 98 0 74 chr10 39056832 39057169 -101259596 + AluSx SINE Alu 1 312 0 679 94 15 12 chr10 39057546 39057872 -101258893 - MSR1 Satellite Satellite 0 327 1 207 114 0 0 chr10 39058619 39058654 -101258111 + (TC)n Simple_repeat Simple_repeat 2 36 0 674 107 9 2 chr10 39058949 39059534 -101257231 - MSR1 Satellite Satellite 0 589 1 384 244 41 57 chr10 39060424 39060547 -101256218 - MIR SINE MIR -40 222 102 2110 118 0 0 chr10 39060660 39060956 -101255809 + AluSx SINE Alu 1 296 -16 2143 82 3 39 chr10 39060959 39061289 -101255476 + AluSg SINE Alu 1 310 0 295 261 32 32 chr10 39061612 39061820 -101254945 + (TCTCTG)n Simple_repeat Simple_repeat 1 208 0 268 239 22 36 chr10 39062815 39062953 -101253812 + (CGGG)n Simple_repeat Simple_repeat 1 136 0 206 247 21 21 chr10 39063099 39063192 -101253573 + C-rich Low_complexity Low_complexity 4 96 0 612 91 23 19 chr10 39063548 39063773 -101252992 + MSR1 Satellite Satellite 1 225 -1 2418 73 3 13 chr10 39064992 39065308 -101251457 + AluSp SINE Alu 1 313 0 566 151 38 19 chr10 39065799 39065905 -101250860 + AluJo/FLAM SINE Alu 5 112 -200 1866 128 0 17 chr10 39065905 39066223 -101250542 - AluSx SINE Alu 0 312 1 22 56 0 0 chr10 39066601 39066637 -101250128 + GC_rich Low_complexity Low_complexity 1 36 0 2185 94 0 33 chr10 39067387 39067694 -101249071 - AluSx SINE Alu -15 297 1 440 267 90 99 chr10 39067780 39067966 -101248799 + L1ME4a LINE L1 5692 5878 -243 779 194 0 0 chr10 39067966 39068095 -101248670 + FLAM_C SINE Alu 1 129 -4 440 267 90 99 chr10 39068095 39068320 -101248445 + L1ME4a LINE L1 5878 6099 -22 328 287 29 44 chr10 39068496 39068632 -101248133 - MIR SINE MIR -58 150 17 589 77 0 2 chr10 39068904 39069113 -101247652 + AluSp SINE Alu 1 243 -70 447 143 0 0 chr10 39069321 39069391 -101247374 - AluS SINE Alu -21 290 221 194 0 39 0 chr10 39069422 39069448 -101247317 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 636 86 30 6 chr10 39070674 39071317 -101245448 - MSR1 Satellite Satellite 0 658 1 695 78 13 0 chr10 39072148 39072798 -101243967 - MSR1 Satellite Satellite 0 658 1 2376 91 7 0 chr10 39074745 39075054 -101241711 - AluSx SINE Alu -1 311 1 328 161 0 0 chr10 39075067 39075123 -101241642 - L2 LINE L2 -17 3296 3241 451 169 11 0 chr10 39075142 39075231 -101241534 + MER20 DNA MER1_type 80 169 -50 696 262 159 12 chr10 39075236 39075606 -101241159 - L2 LINE L2 -254 3059 2637 681 199 50 103 chr10 39075606 39075754 -101241011 + L1MB5 LINE L1 5889 6019 -155 2151 86 7 30 chr10 39075754 39076058 -101240707 - AluSx SINE Alu -15 297 1 681 199 50 103 chr10 39076058 39076170 -101240595 + L1MB5 LINE L1 6019 6135 -39 1113 79 0 0 chr10 39076230 39076370 -101240395 + AluSg1 SINE Alu 11 150 -159 251 61 0 0 chr10 39076370 39076403 -101240362 + AluSp/q SINE Alu 218 250 -53 1030 196 21 0 chr10 39076403 39076597 -101240168 + AluJo SINE Alu 85 282 -30 782 133 42 0 chr10 39076597 39076717 -101240048 - FLAM_C SINE Alu -4 139 15 542 161 11 11 chr10 39076715 39076808 -101239957 - FRAM SINE Alu -43 133 41 * 1863 161 3 3 chr10 39076823 39077122 -101239643 - AluJb SINE Alu -13 299 1 283 240 70 30 chr10 39077273 39077373 -101239392 - L2 LINE L2 0 3313 3210 186 171 0 0 chr10 39077602 39077643 -101239122 + G-rich Low_complexity Low_complexity 1 41 0 225 311 0 16 chr10 39078358 39078480 -101238285 + (CCGGG)n Simple_repeat Simple_repeat 4 123 0 * 381 280 6 23 chr10 39078404 39078579 -101238186 + (CGGGG)n Simple_repeat Simple_repeat 1 172 0 216 298 0 0 chr10 39080154 39080211 -101236554 + MIR SINE MIR 76 132 -76 269 286 10 20 chr10 39081040 39081138 -101235627 + CT-rich Low_complexity Low_complexity 3 99 0 615 254 22 54 chr10 39081320 39081505 -101235260 + MIR SINE MIR 49 227 -35 699 215 70 15 chr10 39082286 39082486 -101234279 + MER20 DNA MER1_type 9 219 0 2347 94 3 0 chr10 39082512 39082820 -101233945 - AluSp SINE Alu -4 309 1 1903 147 19 3 chr10 39083083 39083390 -101233375 + AluJb SINE Alu 1 312 0 2336 48 42 0 chr10 39088286 39088575 -101228190 - AluY SINE Alu -10 301 1 628 253 26 0 chr10 39089986 39090140 -101226625 + MIR3 SINE MIR 48 205 -3 239 297 0 16 chr10 39090869 39090933 -101225832 + MIR SINE MIR 128 190 -72 234 240 13 13 chr10 39092612 39092687 -101224078 + (CGGGG)n Simple_repeat Simple_repeat 1 75 0 21 0 0 0 chr10 39092752 39092773 -101223992 + GC_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 39093747 39093770 -101222995 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 564 266 101 0 chr10 39093775 39093993 -101222772 - Tigger3(Golem) DNA MER2_type 0 3038 2799 297 0 0 0 chr10 39094103 39094136 -101222629 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 501 32 0 0 chr10 39094135 39094198 -101222567 + (GA)n Simple_repeat Simple_repeat 1 63 0 1022 116 0 0 chr10 39094200 39094338 -101222427 - AluSg/x SINE Alu -41 269 132 2039 103 3 33 chr10 39094338 39094638 -101222127 - AluSq SINE Alu -22 291 1 1259 129 5 0 chr10 39094647 39094833 -101221932 - AluJo SINE Alu -26 286 100 2091 113 31 0 chr10 39094857 39095148 -101221617 - AluSx SINE Alu -12 300 1 273 282 14 0 chr10 39095225 39095296 -101221469 + MIR SINE MIR 80 151 -111 353 371 47 33 chr10 39095750 39095963 -101220802 + L1ME3A LINE L1 5639 5854 -316 2184 110 0 7 chr10 39096020 39096329 -101220436 + AluSq SINE Alu 1 307 -6 405 78 13 39 chr10 39096564 39096641 -101220124 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2138 74 7 7 chr10 39096754 39097037 -101219728 - AluY SINE Alu -28 283 1 2233 88 0 31 chr10 39097114 39097434 -101219331 - AluY SINE Alu -1 310 1 2213 98 0 7 chr10 39097443 39097770 -101218995 - AluSg1 SINE Alu 0 309 1 405 132 0 29 chr10 39097896 39097987 -101218778 + AluSp/q SINE Alu 224 313 0 864 138 38 12 chr10 39097987 39098147 -101218618 - THE1C LTR MaLR -211 164 1 2154 105 10 3 chr10 39098176 39098482 -101218283 + AluSx SINE Alu 1 308 -4 381 276 2 0 chr10 39098593 39098699 -101218066 - MIR SINE MIR -63 145 71 1220 203 108 0 chr10 39098804 39099100 -101217665 + L1MB5 LINE L1 5811 6138 -36 2094 124 0 16 chr10 39099105 39099419 -101217346 + AluSx SINE Alu 1 309 -3 297 179 0 90 chr10 39099441 39099519 -101217246 - AluJ/FRAM SINE Alu -16 286 216 1642 178 21 0 chr10 39099591 39099872 -101216893 - AluJo SINE Alu -25 287 1 180 296 0 19 chr10 39099945 39099999 -101216766 + MER5A DNA MER1_type 38 90 -99 1831 166 14 0 chr10 39100025 39100320 -101216445 - AluJo SINE Alu -13 299 1 222 253 13 13 chr10 39100321 39100422 -101216343 + (TA)n Simple_repeat Simple_repeat 1 101 0 1250 251 41 88 chr10 39100464 39100513 -101216252 + MLT1F LTR MaLR 1 51 -491 2194 97 7 7 chr10 39100513 39100813 -101215952 - AluSg SINE Alu -10 300 1 1250 251 41 88 chr10 39100813 39100995 -101215770 + MLT1F LTR MaLR 51 240 -302 2093 88 10 36 chr10 39100995 39101301 -101215464 + AluSq SINE Alu 1 298 -15 261 0 0 0 chr10 39101301 39101330 -101215435 + (TA)n Simple_repeat Simple_repeat 2 30 0 558 0 0 0 chr10 39101329 39101391 -101215374 + (GA)n Simple_repeat Simple_repeat 2 63 0 1250 251 41 88 chr10 39101330 39101671 -101215094 + MLT1F LTR MaLR 238 490 -52 2308 76 0 0 chr10 39101724 39102015 -101214750 + AluSg SINE Alu 1 291 -19 203 341 22 0 chr10 39102016 39102107 -101214658 + L2 LINE L2 2776 2868 -446 936 104 7 32 chr10 39102218 39102372 -101214393 - AluSx SINE Alu -146 166 17 662 212 0 0 chr10 39102381 39102499 -101214266 + FAM SINE Alu 49 166 -19 603 220 71 54 chr10 39102512 39102680 -101214085 + L1M4 LINE L1 5474 5644 -530 1264 69 0 0 chr10 39102683 39102843 -101213922 + AluSq SINE Alu 145 304 -9 225 388 0 0 chr10 39102854 39102988 -101213777 + (TGGA)n Simple_repeat Simple_repeat 4 137 0 192 298 155 0 chr10 39103001 39103085 -101213680 + MIR SINE MIR 4 100 -162 26 0 0 0 chr10 39103306 39103332 -101213433 + AT_rich Low_complexity Low_complexity 1 26 0 1997 71 0 46 chr10 39103338 39103621 -101213144 + AluY SINE Alu 1 270 -41 349 92 0 0 chr10 39103721 39103787 -101212978 - Alu SINE Alu -251 51 1 779 198 44 6 chr10 39103787 39103969 -101212796 - L1MB5 LINE L1 -47 6127 5939 1105 53 0 0 chr10 39104157 39104288 -101212477 - AluSg SINE Alu -179 131 1 2387 99 0 0 chr10 39104339 39104652 -101212113 - AluSq SINE Alu 0 313 1 325 309 55 0 chr10 39104655 39104765 -101212000 - MIR SINE MIR -37 225 110 2191 93 10 3 chr10 39104903 39105214 -101211551 + AluSp SINE Alu 1 313 0 204 0 83 0 chr10 39105976 39106012 -101210753 + T-rich Low_complexity Low_complexity 2 40 0 2339 61 0 0 chr10 39106014 39106294 -101210471 - AluSg SINE Alu -30 280 1 1045 82 0 27 chr10 39106295 39106441 -101210324 - AluSq/x SINE Alu -170 142 1 26 0 0 0 chr10 39106452 39106478 -101210287 + AT_rich Low_complexity Low_complexity 1 26 0 2136 125 0 3 chr10 39106609 39106914 -101209851 + AluSx SINE Alu 1 304 -8 2310 96 0 0 chr10 39106914 39107215 -101209550 + AluSx SINE Alu 1 301 -11 317 189 57 104 chr10 39107215 39107265 -101209500 + L1MB5 LINE L1 6073 6117 -57 2155 126 0 0 chr10 39107265 39107567 -101209198 - AluSq SINE Alu -11 302 1 317 189 57 104 chr10 39107567 39107622 -101209143 + L1MB5 LINE L1 6117 6173 -1 299 197 47 55 chr10 39107637 39107759 -101209006 - MSR1 Satellite Satellite -1 120 1 437 152 22 0 chr10 39108489 39108581 -101208184 - MSR1 Satellite Satellite 0 111 18 268 260 0 40 chr10 39108971 39109071 -101207694 - MSR1 Satellite Satellite -14 97 2 728 49 3 12 chr10 39109773 39110028 -101206737 - MSR1 Satellite Satellite 0 252 1 240 241 96 12 chr10 39110384 39110467 -101206298 + MSR1 Satellite Satellite 14 103 -8 2143 96 6 16 chr10 39110969 39111283 -101205482 + AluSq SINE Alu 3 313 0 2187 116 0 3 chr10 39111304 39111615 -101205150 + AluSq SINE Alu 1 310 -3 1787 122 45 25 chr10 39111622 39111908 -101204857 + AluJo SINE Alu 1 292 -20 1800 121 0 16 chr10 39112078 39112335 -101204430 - AluSx SINE Alu -27 285 33 2039 127 0 3 chr10 39112344 39112636 -101204129 - AluSx SINE Alu -19 293 3 297 192 0 55 chr10 39112736 39112809 -101203956 - AluS SINE Alu -233 69 1 309 234 47 85 chr10 39112809 39112906 -101203859 - MER106A DNA MER1_type -8 228 129 1690 180 3 19 chr10 39112906 39113087 -101203678 - AluJb SINE Alu 0 312 137 2355 89 0 3 chr10 39113087 39113390 -101203375 - AluSq SINE Alu -10 303 2 1690 180 3 19 chr10 39113390 39113525 -101203240 - AluJb SINE Alu -175 137 1 309 234 47 85 chr10 39113525 39113662 -101203103 - MER106A DNA MER1_type -107 129 3 495 232 18 9 chr10 39113664 39113776 -101202989 - L2 LINE L2 -4 3309 3197 657 333 37 8 chr10 39114227 39114470 -101202295 + MIR SINE MIR 5 254 -8 742 229 131 6 chr10 39114604 39114787 -101201978 - MER63A DNA MER1_type -2 208 3 236 282 42 14 chr10 39114845 39114916 -101201849 + MIR SINE MIR 71 143 -65 2244 96 0 3 chr10 39114937 39115109 -101201656 - AluSg SINE Alu -8 302 130 2361 87 0 0 chr10 39115109 39115409 -101201356 - AluY SINE Alu -11 300 1 2244 96 0 3 chr10 39115409 39115539 -101201226 - AluSg SINE Alu -180 130 1 2161 108 0 0 chr10 39115539 39115855 -101200910 - AluSx SINE Alu 0 316 1 2037 140 0 0 chr10 39116567 39116859 -101199906 + AluSx SINE Alu 1 292 -20 754 109 0 0 chr10 39116862 39116963 -101199802 - AluJo/FLAM SINE Alu -203 109 9 261 0 0 0 chr10 39118326 39118355 -101198410 + (T)n Simple_repeat Simple_repeat 1 29 0 208 135 0 0 chr10 39118579 39118616 -101198149 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2366 83 0 3 chr10 39119600 39119902 -101196863 + AluSx SINE Alu 1 301 -11 824 194 38 21 chr10 39120126 39120312 -101196453 - MER20 DNA MER1_type -1 218 30 1059 222 169 14 chr10 39120318 39120750 -101196015 + MLT1D LTR MaLR 6 504 -1 1906 164 18 0 chr10 39121127 39121468 -101195297 + MLT1A1 LTR MaLR 19 365 0 310 171 239 11 chr10 39121664 39121752 -101195013 - MER81 DNA DNA -3 111 4 355 179 16 41 chr10 39122010 39122133 -101194632 + C-rich Low_complexity Low_complexity 5 124 0 2113 127 0 13 chr10 39122536 39122850 -101193915 + AluSx SINE Alu 1 310 -2 1801 143 3 73 chr10 39122883 39123072 -101193693 - AluJb SINE Alu -6 306 148 369 0 0 0 chr10 39123072 39123113 -101193652 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 143 3 73 chr10 39123113 39123252 -101193513 - AluJb SINE Alu -164 148 1 2183 80 31 0 chr10 39123294 39123583 -101193182 - AluSg SINE Alu -12 298 1 401 250 108 0 chr10 39123823 39123943 -101192822 + MER117 DNA MER1_type 18 150 -47 502 293 43 0 chr10 39124025 39124189 -101192576 + MIR SINE MIR 31 201 -61 186 359 54 0 chr10 39126461 39126553 -101190212 + L2 LINE L2 3209 3305 -8 435 252 38 50 chr10 39126837 39126996 -101189769 - MIR3 SINE MIR -15 193 37 260 293 24 85 chr10 39127245 39127409 -101189356 - MIR3 SINE MIR -53 155 2 632 146 6 55 chr10 39128256 39128565 -101188200 + MSR1 Satellite Satellite 1 293 -2 485 287 7 7 chr10 39129377 39129520 -101187245 - MIR SINE MIR -65 197 55 235 244 326 0 chr10 39129626 39129712 -101187053 - L2 LINE L2 0 3272 3159 611 191 143 19 chr10 39129783 39129993 -101186772 + MLT1C LTR MaLR 126 361 -106 2166 128 0 6 chr10 39129993 39130306 -101186459 - AluSq SINE Alu -2 311 1 1097 81 0 0 chr10 39130306 39130442 -101186323 - AluSq/x SINE Alu -176 136 1 331 279 240 22 chr10 39130444 39130623 -101186142 + MIR SINE MIR 44 261 -1 225 229 71 29 chr10 39131095 39131165 -101185600 + MIR SINE MIR 117 189 -73 2129 125 0 0 chr10 39131177 39131489 -101185276 + AluSx SINE Alu 1 312 0 648 233 39 11 chr10 39131514 39131694 -101185071 + MER82 DNA MER2_type 1 185 -468 845 109 39 0 chr10 39131696 39131824 -101184941 - AluSg1 SINE Alu -15 297 165 699 70 0 0 chr10 39131824 39131910 -101184855 - AluSg1 SINE Alu -223 86 1 1813 216 48 18 chr10 39131910 39132364 -101184401 + MER82 DNA MER2_type 179 646 -7 1488 113 196 23 chr10 39132390 39132656 -101184109 + AluSx SINE Alu 1 312 0 412 273 117 73 chr10 39132692 39132745 -101184020 - MIR SINE MIR -37 225 176 2238 99 6 6 chr10 39132745 39133058 -101183707 + AluSq SINE Alu 1 313 0 412 273 117 73 chr10 39133058 39133209 -101183556 - MIR SINE MIR -86 176 12 314 284 11 0 chr10 39133341 39133429 -101183336 + MIR SINE MIR 33 121 -87 1949 120 27 0 chr10 39133492 39133791 -101182974 + AluSg SINE Alu 1 307 -3 1764 148 0 57 chr10 39133823 39133992 -101182773 - AluJo SINE Alu -10 302 158 2498 40 0 7 chr10 39133992 39134293 -101182472 - AluY SINE Alu -11 300 2 1764 148 0 57 chr10 39134293 39134441 -101182324 - AluJo SINE Alu -154 158 3 238 268 120 63 chr10 39134716 39134858 -101181907 - L2 LINE L2 -252 3061 2912 2080 112 0 3 chr10 39134887 39135174 -101181591 - AluSx SINE Alu -26 286 1 2006 141 0 3 chr10 39135436 39135748 -101181017 + AluJb SINE Alu 1 311 -1 2086 128 0 0 chr10 39135759 39136056 -101180709 + AluSx SINE Alu 2 298 -14 2102 124 0 0 chr10 39136058 39136357 -101180408 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 39136991 39137016 -101179749 + AT_rich Low_complexity Low_complexity 1 25 0 2188 108 3 0 chr10 39137032 39137329 -101179436 - AluSg SINE Alu -12 298 1 261 0 0 0 chr10 39137329 39137358 -101179407 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1126 129 6 28 chr10 39137358 39137507 -101179258 - AluSg/x SINE Alu -30 280 134 1847 91 109 4 chr10 39137507 39137782 -101178983 - AluSx SINE Alu -8 304 1 1126 129 6 28 chr10 39137782 39137810 -101178955 - AluSg/x SINE Alu -176 134 107 276 29 0 0 chr10 39137811 39137846 -101178919 + U2 snRNA snRNA 1 35 -153 810 227 0 0 chr10 39137849 39137999 -101178766 - AluJb SINE Alu -27 285 136 2338 90 0 0 chr10 39138007 39138307 -101178458 - AluSx SINE Alu -12 300 1 593 258 14 24 chr10 39138312 39138521 -101178244 - L1MC5 LINE L1 -35 7926 7720 2209 103 7 3 chr10 39138799 39139109 -101177656 + AluSx SINE Alu 1 311 -1 1523 132 107 22 chr10 39139332 39139604 -101177161 - AluJb SINE Alu -17 295 1 355 126 20 25 chr10 39139633 39139733 -101177032 + FLAM SINE Alu 64 121 -12 249 247 82 0 chr10 39140072 39140157 -101176608 - MER20 DNA MER1_type -4 215 124 700 186 7 57 chr10 39140278 39140418 -101176347 - FLAM_C SINE Alu 0 133 1 309 314 76 0 chr10 39140421 39140555 -101176210 - MIR SINE MIR -62 146 51 1266 218 38 145 chr10 39140849 39140921 -101175844 - L1MB7 LINE L1 -9 6175 6097 1719 169 30 3 chr10 39140921 39141223 -101175542 + AluJb SINE Alu 1 310 -2 1266 218 38 145 chr10 39141223 39141341 -101175424 - L1MB7 LINE L1 -87 6097 5968 2398 81 10 0 chr10 39141341 39141651 -101175114 - AluSq SINE Alu 0 313 1 1266 218 38 145 chr10 39141651 39142116 -101174649 - L1MB7 LINE L1 -216 5968 5589 2086 103 16 22 chr10 39142121 39142432 -101174333 - AluSx SINE Alu -3 309 1 2004 133 24 0 chr10 39143951 39144245 -101172520 + AluSx SINE Alu 1 301 -11 2333 92 3 0 chr10 39144332 39144637 -101172128 - AluSp SINE Alu -7 306 1 1146 158 91 24 chr10 39145488 39145536 -101171229 - L1MB7 LINE L1 -19 6165 6118 387 258 89 48 chr10 39145536 39145741 -101171024 - L1MB1 LINE L1 -163 6026 5887 2044 106 3 3 chr10 39145741 39146049 -101170716 - AluSq SINE Alu 0 308 1 387 258 89 48 chr10 39146049 39146103 -101170662 - L1MB1 LINE L1 -302 5887 5837 1026 200 39 45 chr10 39146224 39146390 -101170375 - L1MB1 LINE L1 -864 5282 5117 2627 36 0 0 chr10 39146390 39146694 -101170071 - AluY SINE Alu -7 304 1 1026 200 39 45 chr10 39146694 39146857 -101169908 - L1MB1 LINE L1 -1029 5117 4955 192 97 0 0 chr10 39147640 39147671 -101169094 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 646 107 9 5 chr10 39147819 39148482 -101168283 - MSR1 Satellite Satellite 0 665 1 678 109 18 3 chr10 39149128 39149525 -101167240 - MSR1 Satellite Satellite 0 402 1 303 179 17 86 chr10 39151100 39151217 -101165548 + GA-rich Low_complexity Low_complexity 2 110 0 221 247 45 56 chr10 39151189 39151367 -101165398 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 * 274 264 6 66 chr10 39151315 39151482 -101165283 + GA-rich Low_complexity Low_complexity 6 162 0 1502 147 128 11 chr10 39152036 39152309 -101164456 + AluJo SINE Alu 1 305 -7 546 311 24 48 chr10 39152365 39152616 -101164149 - L2 LINE L2 -5 3308 3064 428 82 33 0 chr10 39152616 39152677 -101164088 - AluYb8 SINE Alu -174 144 82 2420 90 0 0 chr10 39152693 39153003 -101163762 - AluSg SINE Alu 0 310 1 238 215 92 0 chr10 39153010 39153075 -101163690 - MER94 DNA DNA -61 73 3 1800 164 3 7 chr10 39153075 39153385 -101163380 - AluJo SINE Alu -3 309 1 1993 184 106 2 chr10 39153411 39153846 -101162919 + MLT1D LTR MaLR 26 505 0 375 23 0 0 chr10 39153897 39153941 -101162824 + (CA)n Simple_repeat Simple_repeat 1 44 0 229 276 92 10 chr10 39154360 39154458 -101162307 - MIR SINE MIR -62 146 41 580 249 146 5 chr10 39155878 39156063 -101160702 + MIR SINE MIR 31 241 -21 787 222 17 78 chr10 39156089 39156119 -101160646 + MIR SINE MIR 20 50 -212 1769 152 10 29 chr10 39156119 39156429 -101160336 - AluSx SINE Alu -8 304 1 787 222 17 78 chr10 39156429 39156628 -101160137 + MIR SINE MIR 50 235 -27 2005 117 7 3 chr10 39156806 39157096 -101159669 - AluSx SINE Alu -21 291 1 827 185 65 10 chr10 39157695 39157895 -101158870 - L2 LINE L2 -247 3066 2856 252 317 0 0 chr10 39158412 39158472 -101158293 - L2 LINE L2 -1 3312 3253 21 0 0 0 chr10 39158573 39158594 -101158171 + AT_rich Low_complexity Low_complexity 1 21 0 1545 221 128 7 chr10 39158690 39158926 -101157839 - L1MB5 LINE L1 -76 6098 5892 1562 158 37 71 chr10 39158926 39159093 -101157672 - AluSx SINE Alu 0 312 160 2225 113 0 0 chr10 39159093 39159393 -101157372 - AluSg SINE Alu -10 300 1 1562 158 37 71 chr10 39159393 39159548 -101157217 - AluSx SINE Alu -152 160 1 1545 221 128 7 chr10 39159548 39159773 -101156992 - L1MB5 LINE L1 -282 5892 5581 246 130 0 22 chr10 39159778 39159824 -101156941 - MER58A DNA MER1_type -33 74 30 2237 158 21 13 chr10 39160018 39160405 -101156360 - MLT1B LTR MaLR 0 390 1 24 0 0 0 chr10 39261039 39261063 -101055702 + AT_rich Low_complexity Low_complexity 1 24 0 536 267 88 80 chr10 39261806 39262162 -101054603 - HAL1 LINE L1 -269 2238 1872 2279 70 0 30 chr10 39262162 39262460 -101054305 + AluY SINE Alu 1 289 -22 536 267 88 80 chr10 39262460 39262781 -101053984 - HAL1 LINE L1 -635 1872 1555 2112 131 0 3 chr10 39262794 39263099 -101053666 + AluSx SINE Alu 1 304 -8 488 290 138 24 chr10 39263109 39263450 -101053315 + MLT1J2 LTR MaLR 1 380 -70 2204 75 7 3 chr10 39263453 39263768 -101052997 - AluY SINE Alu 0 316 1 2087 96 3 27 chr10 39263873 39264174 -101052591 + AluSc SINE Alu 1 294 -15 1114 180 28 37 chr10 39264237 39264369 -101052396 + AluJo SINE Alu 6 137 -175 207 0 0 0 chr10 39264369 39264392 -101052373 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1114 180 28 37 chr10 39264392 39264476 -101052289 + AluJo SINE Alu 137 220 -92 1910 158 7 0 chr10 39264679 39264970 -101051795 + AluSx SINE Alu 3 295 -17 189 0 0 0 chr10 39265079 39265100 -101051665 + (GA)n Simple_repeat Simple_repeat 2 22 0 189 0 0 0 chr10 39265249 39265270 -101051495 + (GA)n Simple_repeat Simple_repeat 2 22 0 2250 103 3 0 chr10 39265628 39265918 -101050847 + AluSp SINE Alu 3 293 -20 2486 305 60 53 chr10 39266097 39267556 -101049209 + L2 LINE L2 1841 3313 0 2444 70 0 0 chr10 39267852 39268151 -101048614 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 39268196 39268217 -101048548 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39269425 39269476 -101047289 + AT_rich Low_complexity Low_complexity 1 51 0 258 32 0 0 chr10 39269476 39269507 -101047258 + (GA)n Simple_repeat Simple_repeat 2 32 0 2312 94 0 10 chr10 39269579 39269877 -101046888 - AluY SINE Alu -16 295 1 32 26 0 0 chr10 39269953 39269992 -101046773 + AT_rich Low_complexity Low_complexity 1 39 0 1978 149 7 0 chr10 39270998 39271300 -101045465 - AluSx SINE Alu -8 304 1 25 0 0 0 chr10 39271302 39271327 -101045438 + AT_rich Low_complexity Low_complexity 1 25 0 255 295 13 0 chr10 39271364 39271442 -101045323 + Charlie2 DNA MER1_type 2784 2862 0 2103 111 10 3 chr10 39271648 39271946 -101044819 - AluSx SINE Alu -12 300 1 202 253 192 20 chr10 39272064 39272163 -101044602 + L2 LINE L2 3173 3288 -25 180 308 0 0 chr10 39272365 39272417 -101044348 + L2 LINE L2 3262 3313 0 400 294 153 13 chr10 39272427 39272655 -101044110 + MIR SINE MIR 1 260 -2 2331 78 10 0 chr10 39273325 39273619 -101043146 + AluY SINE Alu 1 297 -14 31 26 0 0 chr10 39273625 39273663 -101043102 + AT_rich Low_complexity Low_complexity 1 38 0 219 267 127 47 chr10 39273936 39274086 -101042679 + L3b LINE CR1 1137 1298 -285 322 320 24 0 chr10 39274672 39274797 -101041968 - L2 LINE L2 0 3313 3186 202 250 0 0 chr10 39276421 39276465 -101040300 + A-rich Low_complexity Low_complexity 1 44 0 290 26 26 0 chr10 39277391 39277430 -101039335 + (TG)n Simple_repeat Simple_repeat 2 41 0 303 202 24 0 chr10 39279774 39279858 -101036907 + Charlie2 DNA MER1_type 2287 2372 -490 2090 146 37 37 chr10 39279961 39280518 -101036247 - MLT2A2 LTR ERVL 0 554 1 530 178 13 53 chr10 39280518 39280669 -101036096 + Charlie2 DNA MER1_type 2463 2607 -255 651 217 190 0 chr10 39282114 39282298 -101034467 + MER20 DNA MER1_type 1 219 0 1070 190 40 117 chr10 39282387 39282782 -101033983 + MLT1A1 LTR MaLR 1 365 0 2208 118 0 0 chr10 39284142 39284439 -101032326 - AluSg SINE Alu -11 299 3 217 200 15 77 chr10 39284442 39284460 -101032305 + MIR SINE MIR 98 116 -146 1949 174 0 7 chr10 39284460 39284759 -101032006 - AluSx SINE Alu -15 297 1 217 200 15 77 chr10 39284759 39284805 -101031960 + MIR SINE MIR 116 158 -104 186 43 0 0 chr10 39284840 39284863 -101031902 + (CA)n Simple_repeat Simple_repeat 2 24 0 454 183 63 80 chr10 39285496 39285671 -101031094 + MER53 DNA DNA 5 176 -13 311 230 11 1 chr10 39285707 39285796 -101030969 - MLT1J1 LTR MaLR 0 446 363 225 178 110 27 chr10 39286019 39286092 -101030673 - MLT1J2 LTR MaLR -371 79 1 4806 89 21 44 chr10 39286356 39286854 -101029911 - L1PA11 LINE L1 0 6174 5666 2294 95 0 0 chr10 39286854 39287150 -101029615 - AluY SINE Alu -11 300 5 4806 89 21 44 chr10 39287150 39287325 -101029440 - L1PA11 LINE L1 -508 5666 5519 2233 129 0 0 chr10 39287325 39287628 -101029137 - AluSx SINE Alu -9 303 1 4806 89 21 44 chr10 39287628 39287749 -101029016 - L1PA11 LINE L1 -655 5519 5397 2222 85 0 0 chr10 39288109 39288418 -101028347 + AluY SINE Alu 1 309 0 22 0 0 0 chr10 39289319 39289341 -101027424 + AT_rich Low_complexity Low_complexity 1 22 0 207 136 23 23 chr10 39289657 39289701 -101027064 + CT-rich Low_complexity Low_complexity 1 44 0 1168 209 15 116 chr10 39290340 39290746 -101026019 + MLT1A1 LTR MaLR 1 365 0 588 316 39 19 chr10 39290793 39290999 -101025766 - MIR SINE MIR -31 231 22 351 144 0 7 chr10 39291238 39291336 -101025429 - Alu SINE Alu 0 302 134 2476 70 3 0 chr10 39291336 39291638 -101025127 - AluSp SINE Alu -10 303 1 366 176 14 0 chr10 39293080 39293154 -101023611 + MER103 DNA DNA 40 114 -52 2018 137 44 22 chr10 39293624 39293989 -101022776 + THE1C LTR MaLR 1 373 -2 2379 50 0 3 chr10 39295454 39295784 -101020981 - AluY SINE Alu 0 329 1 198 0 0 0 chr10 39295784 39295806 -101020959 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2025 111 4 4 chr10 39295806 39296085 -101020680 - AluSc SINE Alu -30 279 1 271 310 0 0 chr10 39296644 39296702 -101020063 - MER91 DNA MER1_type -81 59 2 1234 168 0 42 chr10 39296854 39297092 -101019673 - L1MC1 LINE L1 -17 6316 6089 2017 133 14 3 chr10 39297528 39297822 -101018943 + AluSg SINE Alu 1 297 -13 1163 154 46 10 chr10 39297912 39298137 -101018628 + AluSg/x SINE Alu 83 314 0 2759 173 7 9 chr10 39298208 39298764 -101018001 + L1MA5 LINE L1 5746 6300 0 2132 256 204 23 chr10 39299617 39299761 -101017004 + L1MC4 LINE L1 6459 6576 -1466 2259 96 7 3 chr10 39299761 39300063 -101016702 - AluSc SINE Alu -6 303 1 2132 256 204 23 chr10 39300063 39300844 -101015921 + L1MC4 LINE L1 6576 7214 -828 656 214 0 24 chr10 39300844 39300970 -101015795 + FLAM_A SINE Alu 1 123 -10 2132 256 204 23 chr10 39300970 39301265 -101015500 + L1MC4 LINE L1 7214 7901 -141 248 160 0 0 chr10 39301266 39301316 -101015449 + L1MC4 LINE L1 7989 8038 -4 2072 111 0 42 chr10 39301339 39301646 -101015119 + AluSx SINE Alu 5 298 -14 749 290 81 76 chr10 39302053 39302668 -101014097 + L2 LINE L2 2538 3168 -145 336 287 81 0 chr10 39302730 39302866 -101013899 + L1ME LINE L1 28 174 -5896 2265 115 0 10 chr10 39302872 39303338 -101013427 - AluY SINE Alu 0 463 1 770 165 17 11 chr10 39303338 39303514 -101013251 + CT-rich Low_complexity Low_complexity 3 179 0 266 163 11 43 chr10 39303531 39303623 -101013142 + CT-rich Low_complexity Low_complexity 3 91 0 424 235 31 0 chr10 39303678 39303776 -101012989 + L1ME LINE L1 438 538 -5532 763 256 96 82 chr10 39303791 39304180 -101012585 + L1ME LINE L1 676 1058 -5061 2261 100 7 0 chr10 39304180 39304481 -101012284 + AluY SINE Alu 1 303 -8 763 256 96 82 chr10 39304481 39305308 -101011457 + L1ME LINE L1 1058 1941 -4178 2215 125 0 0 chr10 39305319 39305624 -101011141 + AluSg SINE Alu 1 305 -5 1716 122 6 113 chr10 39305632 39306012 -101010753 + AluSg SINE Alu 1 344 0 2092 122 0 7 chr10 39306017 39306313 -101010452 + AluSc SINE Alu 1 294 -15 242 262 49 18 chr10 39306315 39306479 -101010286 + L1ME LINE L1 1909 2077 -4003 26 50 0 0 chr10 39306492 39306532 -101010233 + AT_rich Low_complexity Low_complexity 1 40 0 286 276 62 14 chr10 39306550 39306695 -101010070 + L1ME LINE L1 2110 2261 -3819 2279 79 3 20 chr10 39306699 39307003 -101009762 + AluY SINE Alu 1 299 -12 2380 277 70 38 chr10 39307013 39308196 -101008569 + L1ME LINE L1 3066 4314 -1766 311 0 0 22 chr10 39308196 39308242 -101008523 + L1PA2 LINE L1 6108 6152 -3 2380 277 70 38 chr10 39308242 39308638 -101008127 + L1ME LINE L1 4314 4696 -1384 2388 66 0 31 chr10 39308649 39308968 -101007797 - AluY SINE Alu -2 309 1 278 326 12 0 chr10 39308995 39309081 -101007684 + MIR SINE MIR 65 151 -111 22 35 0 0 chr10 39309117 39309146 -101007619 + AT_rich Low_complexity Low_complexity 1 29 0 2271 87 20 0 chr10 39309400 39309699 -101007066 - AluY SINE Alu -6 305 1 670 263 38 6 chr10 39311443 39311603 -101005162 + MER5A DNA MER1_type 1 165 -24 1870 214 47 69 chr10 39311612 39312234 -101004531 + MLT1E2 LTR MaLR 18 625 -1 21 57 0 0 chr10 39312535 39312570 -101004195 + AT_rich Low_complexity Low_complexity 1 35 0 2505 58 0 0 chr10 39312570 39312863 -101003902 - AluY SINE Alu -18 293 1 210 312 152 0 chr10 39312864 39312989 -101003776 + MIR SINE MIR 104 247 -15 285 266 185 17 chr10 39313057 39313230 -101003535 - LTR16A1 LTR ERVL 0 457 256 2374 77 7 10 chr10 39313504 39313803 -101002962 - AluSp SINE Alu -15 298 1 21 36 0 0 chr10 39316033 39316061 -101000704 + AT_rich Low_complexity Low_complexity 1 28 0 1886 167 16 8 chr10 39316068 39316452 -101000313 - L1MA4 LINE L1 -9 6291 5905 25 0 0 0 chr10 39317968 39317993 -100998772 + AT_rich Low_complexity Low_complexity 1 25 0 3378 183 19 4 chr10 39319414 39320091 -100996674 - L1PA16 LINE L1 -16 6150 5464 2037 123 33 3 chr10 39320121 39320421 -100996344 + AluSc SINE Alu 1 309 0 455 286 78 10 chr10 39321077 39321270 -100995495 + MIR SINE MIR 39 250 -12 1985 97 87 7 chr10 39322393 39322682 -100994083 - AluSx SINE Alu 0 312 1 698 125 70 7 chr10 39322766 39322932 -100993833 + L1MA9 LINE L1 6110 6311 -1 850 284 0 0 chr10 39323464 39323686 -100993079 + Charlie1 DNA MER1_type 1 222 -2539 580 212 15 0 chr10 39323685 39323822 -100992943 + Charlie1 DNA MER1_type 2622 2760 -1 * 2146 138 0 10 chr10 39323988 39324299 -100992466 - AluSg SINE Alu -2 308 1 22 35 0 0 chr10 39324606 39324635 -100992130 + AT_rich Low_complexity Low_complexity 1 29 0 2414 172 16 31 chr10 39326485 39326583 -100990182 - L1MC1 LINE L1 -13 6320 6222 2220 77 3 0 chr10 39326583 39326910 -100989855 - AluSp SINE Alu 0 328 1 2414 172 16 31 chr10 39326910 39327327 -100989438 - L1MC1 LINE L1 -111 6222 5812 2040 145 0 0 chr10 39328423 39328712 -100988053 + AluSg SINE Alu 1 289 -21 23 0 0 0 chr10 39328745 39328768 -100987997 + AT_rich Low_complexity Low_complexity 1 23 0 2370 90 3 3 chr10 39328943 39329254 -100987511 - AluY SINE Alu 0 311 1 2351 83 0 0 chr10 39329458 39329760 -100987005 + AluY SINE Alu 2 303 -8 470 290 88 20 chr10 39330786 39331127 -100985638 - L1MCc LINE L1 -4893 1530 1167 2173 119 3 10 chr10 39331693 39332005 -100984760 - AluSx SINE Alu -2 310 1 271 333 36 23 chr10 39332039 39332258 -100984507 - L1MCc LINE L1 -6180 243 22 489 310 88 41 chr10 39332446 39332865 -100983900 - L1MEc LINE L1 -4574 1822 1384 23 0 0 0 chr10 39333942 39333965 -100982800 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 39334349 39334374 -100982391 + AT_rich Low_complexity Low_complexity 1 25 0 2383 67 0 32 chr10 39334504 39334817 -100981948 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 39336661 39336685 -100980080 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 39338161 39338187 -100978578 + AT_rich Low_complexity Low_complexity 1 26 0 418 255 0 0 chr10 39338267 39338365 -100978400 - MER58 DNA MER1_type -4 2416 2319 424 260 21 0 chr10 39338377 39338473 -100978292 - MER58 DNA MER1_type -2320 100 3 2332 73 0 3 chr10 39338549 39338849 -100977916 - AluY SINE Alu -12 299 1 212 296 93 0 chr10 39338906 39338960 -100977805 + L2 LINE L2 3206 3264 -8 23 0 0 0 chr10 39339164 39339187 -100977578 + AT_rich Low_complexity Low_complexity 1 23 0 1824 162 3 0 chr10 39339187 39339484 -100977281 - AluSx SINE Alu -14 298 1 323 254 13 9 chr10 39340027 39340253 -100976512 + CT-rich Low_complexity Low_complexity 1 227 0 1851 178 7 47 chr10 39341059 39341296 -100975469 - MLT1B LTR MaLR 0 390 174 2228 114 55 0 chr10 39341296 39341639 -100975126 - THE1B LTR MaLR 0 364 3 1851 178 7 47 chr10 39341639 39341806 -100974959 - MLT1B LTR MaLR -216 174 2 2377 85 3 0 chr10 39342326 39342621 -100974144 - AluY SINE Alu -15 296 1 21 57 0 0 chr10 39342626 39342661 -100974104 + AT_rich Low_complexity Low_complexity 1 35 0 321 261 79 61 chr10 39343080 39343245 -100973520 - MLT1K LTR MaLR -26 562 395 180 125 0 0 chr10 39343335 39343367 -100973398 + (TC)n Simple_repeat Simple_repeat 2 33 0 609 193 30 52 chr10 39343646 39343781 -100972984 - FLAM_A SINE Alu 0 133 2 2461 82 0 0 chr10 39344055 39344358 -100972407 + AluY SINE Alu 1 303 -8 201 74 0 0 chr10 39344482 39344509 -100972256 + (TG)n Simple_repeat Simple_repeat 1 27 0 581 156 0 90 chr10 39344991 39345113 -100971652 - HY1 scRNA scRNA -1 111 1 2075 125 16 13 chr10 39345580 39345891 -100970874 + AluSx SINE Alu 1 312 0 360 283 0 17 chr10 39345893 39346013 -100970752 + MLT1H LTR MaLR 91 208 -341 24 53 0 0 chr10 39346152 39346190 -100970575 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr10 39346450 39346478 -100970287 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 39346535 39346556 -100970209 + AT_rich Low_complexity Low_complexity 1 21 0 2307 77 0 0 chr10 39346559 39346845 -100969920 + AluY SINE Alu 1 286 -25 2346 83 0 29 chr10 39347394 39347708 -100969057 + AluY SINE Alu 1 305 -6 1352 199 106 9 chr10 39347909 39348240 -100968525 + MLT1A1 LTR MaLR 1 363 -2 2628 51 0 0 chr10 39350049 39350360 -100966405 - AluY SINE Alu 0 311 1 1604 193 78 49 chr10 39350652 39350731 -100966034 + MER101 LTR ERV1 11 86 -388 2243 79 0 7 chr10 39350731 39351034 -100965731 + AluY SINE Alu 1 301 -10 1604 193 78 49 chr10 39351034 39351405 -100965360 + MER101 LTR ERV1 86 474 0 207 0 0 0 chr10 39351927 39351950 -100964815 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 198 0 41 chr10 39351973 39351993 -100964772 + (TA)n Simple_repeat Simple_repeat 1 20 -96 1452 135 0 5 chr10 39351993 39352200 -100964565 + AluSg/x SINE Alu 82 287 -23 234 198 0 41 chr10 39352200 39352300 -100964465 + (TA)n Simple_repeat Simple_repeat 20 116 0 299 304 0 7 chr10 39352315 39352450 -100964315 + (TA)n Simple_repeat Simple_repeat 1 134 0 222 191 0 0 chr10 39352457 39352504 -100964261 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1698 76 5 0 chr10 39352996 39353207 -100963558 - AluY SINE Alu -99 212 1 2022 251 98 32 chr10 39353208 39353684 -100963081 + L1ME3A LINE L1 4888 5331 -839 2178 88 3 3 chr10 39353684 39353978 -100962787 - AluY SINE Alu -17 294 1 2022 251 98 32 chr10 39353978 39354699 -100962066 + L1ME3A LINE L1 5331 6164 -6 2113 113 0 23 chr10 39356141 39356450 -100960315 + AluSp SINE Alu 1 302 -11 2120 116 7 0 chr10 39356454 39356756 -100960009 + AluSg SINE Alu 1 304 -6 1794 134 3 27 chr10 39356879 39357195 -100959570 + AluSx SINE Alu 1 309 0 1933 148 0 10 chr10 39357323 39357621 -100959144 + AluSx SINE Alu 6 300 -12 1738 162 0 46 chr10 39357745 39358072 -100958693 + AluJb SINE Alu 1 312 0 207 208 113 0 chr10 39358318 39358371 -100958394 - MIR SINE MIR -93 169 111 2011 123 0 36 chr10 39359915 39360223 -100956542 - AluSx SINE Alu -15 297 1 2156 113 3 10 chr10 39360266 39360567 -100956198 - AluSx SINE Alu -13 299 1 2248 68 7 4 chr10 39360856 39361160 -100955605 + AluY SINE Alu 1 305 0 621 314 33 12 chr10 39361679 39361924 -100954841 - LTR16B LTR ERVL -78 386 137 387 73 0 0 chr10 39362275 39362330 -100954435 + (TG)n Simple_repeat Simple_repeat 1 55 0 195 42 0 0 chr10 39362329 39362353 -100954412 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 440 358 53 22 chr10 39362561 39362974 -100953791 - HERVL LTR ERVL -849 4805 4380 293 393 0 0 chr10 39363013 39363153 -100953612 - HERVL LTR ERVL -1225 4260 4121 2076 93 41 0 chr10 39363289 39363579 -100953186 - AluSx SINE Alu -10 302 1 471 348 69 27 chr10 39363584 39363900 -100952865 - HERVL LTR ERVL -1275 3721 3369 2414 59 3 13 chr10 39363900 39364206 -100952559 - AluY SINE Alu -8 303 1 471 348 69 27 chr10 39364206 39364453 -100952312 - HERVL LTR ERVL -1627 3369 3134 553 293 44 4 chr10 39364532 39364761 -100952004 - HERVL LTR ERVL -2371 3283 3046 1491 258 113 11 chr10 39364898 39365665 -100951100 + L1ME1 LINE L1 5241 6094 -72 2372 85 0 0 chr10 39366372 39366679 -100950086 + AluY SINE Alu 1 307 -4 4046 134 15 126 chr10 39366840 39368387 -100948378 - pTR5 LTR ERV1 0 2606 1524 200 281 11 67 chr10 39368440 39368529 -100948236 - MIR SINE MIR -75 187 104 2361 71 0 3 chr10 39368530 39368827 -100947938 - AluY SINE Alu -15 296 1 2363 58 0 35 chr10 39370383 39370694 -100946071 + AluY SINE Alu 1 300 -11 331 67 0 0 chr10 39370750 39370795 -100945970 - Tigger3(Golem) DNA MER2_type -68 2961 2917 1873 158 10 0 chr10 39371011 39371302 -100945463 + AluSx SINE Alu 1 294 -18 611 137 0 0 chr10 39371341 39371436 -100945329 - AluS SINE Alu -218 95 1 226 62 0 0 chr10 39371493 39371525 -100945240 + AluSq SINE Alu 1 32 -269 1681 110 8 4 chr10 39371525 39371762 -100945003 + AluSq SINE Alu 76 313 0 534 276 69 23 chr10 39371841 39372015 -100944750 + MIR SINE MIR 3 184 -78 5345 147 75 44 chr10 39372096 39372414 -100944351 - Tigger3b DNA MER2_type -1797 1231 925 215 61 30 0 chr10 39372414 39372447 -100944318 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5345 147 75 44 chr10 39372447 39373001 -100943764 - Tigger3b DNA MER2_type -2103 925 308 1984 104 0 4 chr10 39373001 39373260 -100943505 + AluSq SINE Alu 1 258 -55 5345 147 75 44 chr10 39373260 39373578 -100943187 - Tigger3b DNA MER2_type -2720 308 2 214 244 35 58 chr10 39373593 39373679 -100943086 + L2 LINE L2 2371 2454 -860 2073 121 0 4 chr10 39373806 39374079 -100942686 - AluSx SINE Alu -22 290 19 192 308 164 27 chr10 39374334 39374480 -100942285 + MIR3 SINE MIR 12 177 -31 214 276 0 46 chr10 39374508 39374595 -100942170 - L2 LINE L2 -59 3254 3172 2298 97 3 0 chr10 39376019 39376319 -100940446 - AluY SINE Alu -10 301 1 566 102 0 34 chr10 39376822 39376940 -100939825 + (GGAA)n Simple_repeat Simple_repeat 2 115 0 343 0 43 0 chr10 39377322 39377369 -100939396 + (TC)n Simple_repeat Simple_repeat 2 50 0 1685 271 134 6 chr10 39377709 39378640 -100938125 - L1ME3A LINE L1 -30 6140 5089 234 0 0 0 chr10 39378664 39378690 -100938075 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2448 98 0 0 chr10 39379519 39379825 -100936940 - AluSc SINE Alu -3 306 1 2377 53 3 13 chr10 39379834 39380133 -100936632 - AluY SINE Alu -15 296 1 26 30 0 0 chr10 39380139 39380172 -100936593 + AT_rich Low_complexity Low_complexity 1 33 0 1244 222 22 0 chr10 39380178 39380448 -100936317 - AluJo SINE Alu -36 276 1 2386 76 7 3 chr10 39380586 39380890 -100935875 + AluSg SINE Alu 1 305 -5 2397 59 3 3 chr10 39381479 39381786 -100934979 - AluY SINE Alu -4 307 1 597 28 0 0 chr10 39382268 39382339 -100934426 + (CA)n Simple_repeat Simple_repeat 2 72 0 25 51 0 0 chr10 39382719 39382758 -100934007 + AT_rich Low_complexity Low_complexity 1 39 0 1540 203 42 25 chr10 39383757 39384116 -100932649 + MLT1A1 LTR MaLR 1 365 0 183 383 34 7 chr10 39385183 39385332 -100931433 + L2 LINE L2 1818 1970 -1344 226 250 26 0 chr10 39385346 39385422 -100931343 - L1ME3A LINE L1 -12 6158 6081 27 0 0 0 chr10 39385521 39385548 -100931217 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr10 39385643 39385680 -100931085 + AT_rich Low_complexity Low_complexity 1 37 0 311 289 0 0 chr10 39386269 39386352 -100930413 + MIR SINE MIR 25 107 -155 1099 255 79 43 chr10 39386388 39386858 -100929907 - MLT1D LTR MaLR 0 505 19 1067 257 97 9 chr10 39387433 39387886 -100928879 + MLT1D LTR MaLR 1 390 0 215 298 157 16 chr10 39387957 39388078 -100928687 - L2 LINE L2 -219 3053 2916 314 324 48 59 chr10 39388333 39388605 -100928160 - L2 LINE L2 -828 2486 2218 22 56 0 0 chr10 39389638 39389674 -100927091 + AT_rich Low_complexity Low_complexity 1 36 0 2235 88 10 0 chr10 39390141 39390438 -100926327 + AluSq SINE Alu 1 300 -13 402 21 0 0 chr10 39390458 39390505 -100926260 + (TG)n Simple_repeat Simple_repeat 2 48 0 1304 188 36 10 chr10 39391370 39391674 -100925091 - L1MA6 LINE L1 -13 6287 5976 2323 100 0 3 chr10 39392091 39392402 -100924363 + AluSg SINE Alu 1 310 0 309 283 123 9 chr10 39394853 39394959 -100921806 + L2 LINE L2 3193 3310 -3 389 185 12 25 chr10 39395346 39395427 -100921338 - MER3 DNA MER1_type -129 80 1 2186 102 0 7 chr10 39395508 39395803 -100920962 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39395841 39395862 -100920903 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39395918 39395958 -100920807 + AT_rich Low_complexity Low_complexity 1 40 0 2341 63 7 3 chr10 39396067 39396370 -100920395 - AluY SINE Alu -2 309 6 1042 83 8 0 chr10 39396375 39396507 -100920258 - AluY SINE Alu -178 133 1 2389 82 0 3 chr10 39396521 39396827 -100919938 - AluY SINE Alu -6 305 1 971 229 23 29 chr10 39396861 39397167 -100919598 - L1MC3 LINE L1 -1493 6292 5989 586 201 34 117 chr10 39397182 39397229 -100919536 - L1MC3 LINE L1 -1965 5820 5771 297 0 0 0 chr10 39397229 39397262 -100919503 + (TG)n Simple_repeat Simple_repeat 1 33 0 586 201 34 117 chr10 39397262 39397404 -100919361 - L1MC3 LINE L1 -2014 5771 5662 1954 118 3 67 chr10 39397404 39397735 -100919030 + AluSx SINE Alu 1 310 -2 586 201 34 117 chr10 39397735 39397842 -100918923 - L1MC3 LINE L1 -2123 5662 5548 508 269 19 19 chr10 39397866 39398026 -100918739 - L1MC3 LINE L1 -2063 4083 3924 755 76 0 0 chr10 39398032 39398137 -100918628 + AluY SINE Alu 198 302 -9 1223 256 48 55 chr10 39398158 39398370 -100918395 - L1MC3 LINE L1 -2214 3932 3720 2189 84 30 10 chr10 39398370 39398669 -100918096 - AluY SINE Alu -6 305 1 1223 256 48 55 chr10 39398669 39398929 -100917836 - L1MC3 LINE L1 -2426 3720 3464 2162 97 3 7 chr10 39398929 39399228 -100917537 - AluSc SINE Alu -11 298 1 1223 256 48 55 chr10 39399228 39399448 -100917317 - L1MC3 LINE L1 -2682 3464 3244 22 0 0 0 chr10 39400134 39400156 -100916609 + AT_rich Low_complexity Low_complexity 1 22 0 2444 68 3 3 chr10 39400469 39400779 -100915986 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39400796 39400831 -100915934 + AT_rich Low_complexity Low_complexity 1 35 0 2325 119 0 0 chr10 39401401 39401841 -100914924 + AluSg SINE Alu 1 440 0 1798 159 7 7 chr10 39402201 39402502 -100914263 - AluSx SINE Alu -11 301 1 479 213 44 38 chr10 39403844 39404027 -100912738 - LTR37B LTR ERV1 -29 439 256 3671 185 29 53 chr10 39404029 39404423 -100912342 + L1MB4 LINE L1 4905 5307 -873 2077 129 3 0 chr10 39404423 39404717 -100912048 + AluSq SINE Alu 1 295 -18 3671 185 29 53 chr10 39404717 39405474 -100911291 + L1MB4 LINE L1 5307 6025 -155 2072 149 0 0 chr10 39405474 39405770 -100910995 - AluSc SINE Alu -10 299 4 3671 185 29 53 chr10 39405770 39405885 -100910880 + L1MB4 LINE L1 6025 6141 -39 2062 133 3 16 chr10 39405927 39406235 -100910530 - AluSp SINE Alu -9 304 1 1268 226 111 46 chr10 39406615 39407121 -100909644 - L1MA7 LINE L1 -11 6280 5744 324 248 50 14 chr10 39407121 39407262 -100909503 + L1M LINE L1 5259 5404 -955 4032 167 92 31 chr10 39407262 39408711 -100908054 + pTR5 LTR ERV1 741 2438 0 558 196 128 34 chr10 39408735 39408970 -100907795 + L1MCa LINE L1 1711 1967 -4459 227 260 173 0 chr10 39409002 39409106 -100907659 + L1MCa LINE L1 2059 2180 -4246 1869 168 0 0 chr10 39409290 39409576 -100907189 + AluSx SINE Alu 1 286 -26 1455 94 10 5 chr10 39409676 39409877 -100906888 + AluSp SINE Alu 107 308 -5 2026 149 10 0 chr10 39409877 39410186 -100906579 + AluSx SINE Alu 1 312 0 2276 156 27 20 chr10 39410186 39410682 -100906083 + LTR49-int LTR ERV1 5262 5816 -633 482 467 130 11 chr10 39410706 39410976 -100905789 - AluJb SINE Alu 0 302 1 244 155 0 35 chr10 39411036 39411094 -100905671 + L1MCa LINE L1 3134 3189 -3237 2075 147 7 0 chr10 39411094 39411400 -100905365 + AluSc SINE Alu 1 308 -1 405 0 0 0 chr10 39411403 39411448 -100905317 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 459 276 88 29 chr10 39411453 39411979 -100904786 + L1MCa LINE L1 3176 3732 -2694 850 216 39 86 chr10 39412094 39412496 -100904269 - MLT1A2 LTR MaLR 0 457 1 311 261 45 9 chr10 39412497 39412608 -100904157 + L1MCa LINE L1 3820 3934 -2492 283 230 31 126 chr10 39412607 39412933 -100903832 + L1MCa LINE L1 4874 5168 -1258 * 497 329 65 22 chr10 39412948 39413288 -100903477 - L2 LINE L2 -212 3101 2748 201 349 116 23 chr10 39413329 39413458 -100903307 + MIR3 SINE MIR 58 198 -10 1522 96 8 16 chr10 39413476 39413642 -100903123 - L1P LINE L1 -959 5187 5022 2225 93 33 7 chr10 39413642 39413942 -100902823 - AluSg SINE Alu -2 308 1 1522 96 8 16 chr10 39413942 39414026 -100902739 - L1P LINE L1 -1124 5022 4939 6697 75 7 15 chr10 39414026 39414626 -100902139 + L1PA8 LINE L1 5184 5774 -398 2452 81 3 0 chr10 39414626 39414933 -100901832 + AluY SINE Alu 1 308 -3 6697 75 7 15 chr10 39414933 39415324 -100901441 + L1PA8 LINE L1 5774 6167 -5 555 56 0 0 chr10 39415328 39415399 -100901366 + (TA)n Simple_repeat Simple_repeat 2 72 0 2301 84 3 0 chr10 39416642 39416939 -100899826 + AluSx SINE Alu 1 298 -14 1267 175 58 5 chr10 39416972 39417285 -100899480 + MER33 DNA MER1_type 1 314 -10 2003 148 0 0 chr10 39417739 39418043 -100898722 - AluSx SINE Alu -8 304 1 2445 74 0 0 chr10 39418367 39418666 -100898099 + AluY SINE Alu 1 299 -12 218 250 231 0 chr10 39419283 39419387 -100897378 - MIR SINE MIR -121 141 14 2419 80 0 0 chr10 39419800 39420099 -100896666 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 39420763 39420794 -100895971 + AT_rich Low_complexity Low_complexity 1 31 0 379 212 106 8 chr10 39422004 39422136 -100894629 + MIR SINE MIR 118 262 0 599 191 0 0 chr10 39422269 39422374 -100894391 + AluJb SINE Alu 184 288 -24 1968 116 11 11 chr10 39422395 39422679 -100894086 - AluSg SINE Alu -26 284 1 21 36 0 0 chr10 39422679 39422707 -100894058 + AT_rich Low_complexity Low_complexity 1 28 0 201 74 0 0 chr10 39424487 39424514 -100892251 + (TC)n Simple_repeat Simple_repeat 2 28 0 200 233 0 0 chr10 39424618 39424661 -100892104 + T-rich Low_complexity Low_complexity 1 43 0 289 304 16 8 chr10 39425276 39425401 -100891364 - L1MEc LINE L1 -2621 3761 3636 311 327 13 40 chr10 39425590 39425740 -100891025 + MLT1H LTR MaLR 209 354 -195 26 0 0 0 chr10 39425959 39425985 -100890780 + AT_rich Low_complexity Low_complexity 1 26 0 1664 50 0 5 chr10 39426006 39426205 -100890560 - AluY SINE Alu -113 198 1 24 0 0 0 chr10 39426394 39426418 -100890347 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 39426467 39426500 -100890265 + AT_rich Low_complexity Low_complexity 1 33 0 470 300 29 19 chr10 39426531 39426741 -100890024 - L1MEc LINE L1 -3301 3081 2870 2036 109 51 10 chr10 39426743 39427037 -100889728 - AluSx SINE Alu -6 306 1 2015 134 7 3 chr10 39427177 39427467 -100889298 + AluSc SINE Alu 1 291 -18 2354 71 0 0 chr10 39427715 39428034 -100888731 - AluSg SINE Alu 0 319 1 1593 108 97 41 chr10 39428233 39428531 -100888234 - AluSx SINE Alu 0 313 1 415 340 115 55 chr10 39428954 39429154 -100887611 - L1MEc LINE L1 -4701 1799 1612 2433 77 0 3 chr10 39429154 39429453 -100887312 - AluY SINE Alu -13 298 1 415 340 115 55 chr10 39429453 39429796 -100886969 - L1MEc LINE L1 -4888 1612 1092 1594 111 77 0 chr10 39429796 39430030 -100886735 - AluSc SINE Alu -57 252 1 415 340 115 55 chr10 39430030 39430137 -100886628 - L1MEc LINE L1 -5408 1092 993 2028 128 7 0 chr10 39430318 39430616 -100886149 - AluSx SINE Alu -12 300 1 394 319 69 84 chr10 39430877 39431197 -100885568 - L1MEc LINE L1 -5724 648 334 26 0 0 0 chr10 39431201 39431227 -100885538 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 39431848 39431876 -100884889 + AT_rich Low_complexity Low_complexity 1 28 0 1825 124 4 0 chr10 39432616 39432875 -100883890 + AluSx SINE Alu 38 297 -15 2101 104 7 4 chr10 39433094 39433419 -100883346 - AluSc SINE Alu 0 326 1 699 65 11 0 chr10 39434020 39434143 -100882622 + AluSg/x SINE Alu 193 316 0 221 214 34 146 chr10 39434701 39434790 -100881975 + L2 LINE L2 3234 3312 -1 1065 147 0 0 chr10 39435026 39435208 -100881557 - AluSg/x SINE Alu 0 309 128 1757 187 0 0 chr10 39435282 39435581 -100881184 - AluJo SINE Alu -13 299 1 21 57 0 0 chr10 39435653 39435688 -100881077 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 39435876 39435900 -100880865 + (TG)n Simple_repeat Simple_repeat 1 24 0 2036 141 10 0 chr10 39435901 39436200 -100880565 - AluSq SINE Alu -11 302 1 1683 158 30 33 chr10 39436202 39436505 -100880260 - AluJb SINE Alu -10 302 1 2744 12 0 25 chr10 39436982 39437301 -100879464 + AluY SINE Alu 1 311 0 209 233 0 0 chr10 39437512 39437555 -100879210 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 212 290 103 56 chr10 39437563 39437670 -100879095 - L2 LINE L2 -12 3301 3190 733 169 8 0 chr10 39439858 39439976 -100876789 + FLAM_C SINE Alu 3 121 -12 505 131 0 24 chr10 39440006 39440090 -100876675 + AluJb SINE Alu 212 293 -19 301 276 9 57 chr10 39440194 39440299 -100876466 + L2 LINE L2 2221 2320 -994 270 284 67 45 chr10 39440498 39440632 -100876133 + L2 LINE L2 2644 2780 -534 1352 136 0 5 chr10 39441053 39441274 -100875491 - pTR5 LTR ERV1 -2047 391 172 268 276 10 0 chr10 39441277 39441375 -100875390 - LTR30 LTR ERV1 -80 642 544 4730 146 75 27 chr10 39441376 39442467 -100874298 - pTR5 LTR ERV1 -439 1798 57 29 70 0 0 chr10 39442552 39442609 -100874156 + AT_rich Low_complexity Low_complexity 1 57 0 660 150 60 51 chr10 39442753 39442952 -100873813 - MER6 DNA MER2_type 0 865 -65 243 0 0 0 chr10 39443187 39443214 -100873551 + (TG)n Simple_repeat Simple_repeat 2 28 0 1228 163 6 137 chr10 39443384 39443721 -100873044 + AluJb SINE Alu 10 302 -10 2420 64 0 13 chr10 39444469 39444780 -100871985 - AluY SINE Alu -4 307 1 376 282 112 12 chr10 39445568 39445738 -100871027 + MIR SINE MIR 21 207 -55 857 219 0 12 chr10 39447061 39447221 -100869544 + FRAM SINE Alu 2 159 -7 2436 81 0 3 chr10 39447590 39447900 -100868865 - AluY SINE Alu 0 311 3 2128 98 0 33 chr10 39448353 39448659 -100868106 - AluSc SINE Alu -13 296 1 21 57 0 0 chr10 39448670 39448705 -100868060 + AT_rich Low_complexity Low_complexity 1 35 0 2474 63 0 7 chr10 39448857 39449158 -100867607 + AluY SINE Alu 1 299 -12 1466 106 20 0 chr10 39449158 39449357 -100867408 + AluSg/x SINE Alu 79 281 -31 378 0 0 0 chr10 39449359 39449401 -100867364 + (CA)n Simple_repeat Simple_repeat 2 43 0 2141 115 0 13 chr10 39449569 39449874 -100866891 - AluSx SINE Alu -11 301 1 215 377 26 45 chr10 39450326 39450480 -100866285 - L2 LINE L2 -27 3245 3095 256 242 0 0 chr10 39450718 39450780 -100865985 + MER112 DNA MER1_type 11 72 -188 1911 119 0 7 chr10 39450895 39451208 -100865557 - AluSx SINE Alu 0 311 1 1952 233 45 48 chr10 39451208 39451877 -100864888 + MER31-int LTR ERV1 297 963 -3973 1628 159 106 22 chr10 39452198 39452556 -100864209 + MER67A LTR ERV1 156 543 0 561 310 163 33 chr10 39452749 39453239 -100863526 - L2 LINE L2 -923 2391 1838 198 323 8 60 chr10 39453349 39453482 -100863283 - L2 LINE L2 -590 2724 2599 22 35 0 0 chr10 39453865 39453894 -100862871 + AT_rich Low_complexity Low_complexity 1 29 0 2210 90 7 16 chr10 39454943 39455253 -100861512 - AluSp SINE Alu 0 313 7 857 219 0 12 chr10 39455703 39455863 -100860902 - FRAM SINE Alu -7 159 2 376 282 112 12 chr10 39457186 39457356 -100859409 - MIR SINE MIR -55 207 21 2350 68 3 13 chr10 39458143 39458453 -100858312 + AluY SINE Alu 1 307 -4 1222 163 6 139 chr10 39459200 39459538 -100857227 - AluJb SINE Alu -10 302 10 243 0 0 0 chr10 39459708 39459735 -100857030 + (CA)n Simple_repeat Simple_repeat 2 28 0 660 150 60 51 chr10 39459970 39460169 -100856596 + MER6 DNA MER2_type -65 865 0 29 70 0 0 chr10 39460313 39460370 -100856395 + AT_rich Low_complexity Low_complexity 1 57 0 4698 146 76 26 chr10 39460455 39461544 -100855221 + pTR5 LTR ERV1 57 275 -439 270 258 21 0 chr10 39461545 39461642 -100855123 + LTR30 LTR ERV1 544 642 -80 1344 140 0 5 chr10 39461645 39461866 -100854899 + pTR5 LTR ERV1 172 391 -2047 270 284 67 45 chr10 39462287 39462421 -100854344 - L2 LINE L2 -534 2780 2644 301 276 9 57 chr10 39462620 39462725 -100854040 - L2 LINE L2 -994 2320 2221 505 131 0 24 chr10 39462829 39462913 -100853852 - AluJb SINE Alu -19 293 212 733 169 8 0 chr10 39462943 39463061 -100853704 - FLAM_C SINE Alu -12 121 3 212 290 103 56 chr10 39465249 39465356 -100851409 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39465364 39465407 -100851358 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2792 16 0 0 chr10 39465618 39465929 -100850836 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39466406 39466709 -100850056 + AluJb SINE Alu 1 302 -10 2036 141 10 0 chr10 39466711 39467010 -100849755 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39467011 39467035 -100849730 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39467223 39467258 -100849507 + AT_rich Low_complexity Low_complexity 1 35 0 1757 187 0 0 chr10 39467330 39467629 -100849136 + AluJo SINE Alu 1 299 -13 1066 147 0 0 chr10 39467703 39467885 -100848880 + AluSg/x SINE Alu 130 311 0 207 225 34 146 chr10 39468121 39468210 -100848555 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39468768 39468891 -100847874 - AluSg/x SINE Alu 0 314 191 2234 111 3 3 chr10 39469492 39469789 -100846976 + AluSc SINE Alu 1 297 -12 242 220 68 0 chr10 39469896 39469955 -100846810 - L2 LINE L2 -1 3271 3209 526 239 29 58 chr10 39470154 39470359 -100846406 - MER20 DNA MER1_type -20 199 1 223 93 256 0 chr10 39470701 39470744 -100846021 + MIR3 SINE MIR 122 175 -33 215 344 54 11 chr10 39470863 39470956 -100845809 + L2 LINE L2 3172 3268 -4 211 206 33 98 chr10 39471142 39471234 -100845531 + L3 LINE CR1 1326 1411 -166 229 236 56 14 chr10 39471237 39471309 -100845456 + MIR SINE MIR 119 193 -69 438 311 47 16 chr10 39471701 39471891 -100844874 + MIR SINE MIR 21 216 -46 1752 164 33 41 chr10 39471936 39472302 -100844463 - MLT1A1 LTR MaLR -2 363 1 180 200 0 0 chr10 39472430 39472470 -100844295 + GA-rich Low_complexity Low_complexity 2 41 0 1415 222 26 36 chr10 39473024 39473443 -100843322 + MLT1C LTR MaLR 53 467 0 1411 200 8 95 chr10 39473940 39474340 -100842425 + MLT1A1 LTR MaLR 1 365 0 207 219 0 0 chr10 39474344 39474385 -100842380 + MIR3 SINE MIR 115 155 -53 2163 84 3 39 chr10 39476051 39476359 -100840406 - AluY SINE Alu -14 297 1 201 74 0 0 chr10 39476832 39476859 -100839906 + (A)n Simple_repeat Simple_repeat 1 27 0 2308 126 3 50 chr10 39477273 39477578 -100839187 + THE1B LTR MaLR 1 286 -78 2161 101 0 54 chr10 39477578 39477894 -100838871 - AluSq SINE Alu -14 299 1 2308 126 3 50 chr10 39477894 39477970 -100838795 + THE1B LTR MaLR 286 364 0 216 346 23 38 chr10 39478005 39478138 -100838627 + MIR SINE MIR 122 252 -10 2388 91 0 0 chr10 39478884 39479182 -100837583 + AluY SINE Alu 1 298 -13 27 0 0 0 chr10 39479507 39479534 -100837231 + AT_rich Low_complexity Low_complexity 1 27 0 1809 119 0 12 chr10 39480028 39480280 -100836485 + AluSc SINE Alu 1 249 -60 286 247 0 12 chr10 39480404 39480489 -100836276 + (TA)n Simple_repeat Simple_repeat 1 84 0 25 0 0 0 chr10 39480851 39480876 -100835889 + AT_rich Low_complexity Low_complexity 1 25 0 194 339 46 0 chr10 39482294 39482359 -100834406 - L2 LINE L2 -5 3308 3241 201 321 0 0 chr10 39482509 39482565 -100834200 - L2 LINE L2 -217 3055 3000 2276 105 0 0 chr10 39483410 39483735 -100833030 - L1P4 LINE L1 -398 5765 5441 1554 109 47 33 chr10 39483735 39484005 -100832760 + L1PA13 LINE L1 5868 6145 -18 215 203 17 0 chr10 39484268 39484327 -100832438 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 318 32 26 chr10 39484384 39484573 -100832192 + MIR SINE MIR 58 247 -15 215 338 61 47 chr10 39484728 39484876 -100831889 - L2 LINE L2 -17 3255 3106 342 336 114 0 chr10 39486335 39486466 -100830299 - MIR3 SINE MIR -9 199 54 2460 61 3 0 chr10 39486757 39487054 -100829711 + AluY SINE Alu 5 302 -9 643 249 37 6 chr10 39487186 39487462 -100829303 + MER2 DNA MER2_type 1 344 -1 340 263 74 0 chr10 39488571 39488666 -100828099 + L2 LINE L2 3208 3309 -4 1346 145 41 5 chr10 39488746 39488967 -100827798 - MER30 DNA MER1_type 0 230 2 2215 84 61 7 chr10 39489331 39489628 -100827137 - AluSq SINE Alu 0 313 1 349 347 72 0 chr10 39490758 39490925 -100825840 - MIR SINE MIR -8 254 76 275 50 25 0 chr10 39491507 39491547 -100825218 - MADE1 DNA Mariner -39 41 1 1298 263 49 7 chr10 39492637 39493048 -100823717 + MER57B LTR ERV1 1 428 -6 727 251 48 91 chr10 39493085 39493523 -100823242 - MLT1J1 LTR MaLR 0 446 28 339 44 0 0 chr10 39493642 39493687 -100823078 + (TG)n Simple_repeat Simple_repeat 2 46 0 229 271 173 38 chr10 39493745 39493878 -100822887 + MIR SINE MIR 4 154 -108 1661 230 38 26 chr10 39494055 39494586 -100822179 - L1ME1 LINE L1 -5 6161 5625 225 313 53 52 chr10 39494839 39495060 -100821705 - MIR SINE MIR -14 248 30 21 100 0 0 chr10 39495864 39495934 -100820831 + AT_rich Low_complexity Low_complexity 1 70 0 345 250 171 24 chr10 39496069 39496233 -100820532 + MIR SINE MIR 3 190 -72 330 273 8 31 chr10 39497400 39497528 -100819237 + GA-rich Low_complexity Low_complexity 3 127 0 401 282 82 33 chr10 39498137 39498382 -100818383 + MIR SINE MIR 3 259 -3 6881 51 21 2 chr10 39498724 39499939 -100816826 + L1PA6 LINE L1 4921 6152 -2 584 214 124 126 chr10 39499970 39500169 -100816596 - MLT1E2 LTR MaLR -289 365 122 2328 65 0 29 chr10 39500354 39500664 -100816101 + AluY SINE Alu 1 301 -10 2165 123 3 3 chr10 39500762 39501072 -100815693 - AluSp SINE Alu -3 310 1 21 0 0 0 chr10 39501073 39501094 -100815671 + AT_rich Low_complexity Low_complexity 1 21 0 335 245 43 32 chr10 39501253 39501347 -100815418 + MER5A DNA MER1_type 12 106 -83 276 340 35 40 chr10 39501481 39501585 -100815180 - MIR SINE MIR -10 252 148 2282 109 13 0 chr10 39501585 39501888 -100814877 - AluSx SINE Alu -5 307 1 276 340 35 40 chr10 39501888 39501983 -100814782 - MIR SINE MIR -114 148 54 218 330 73 46 chr10 39502237 39502346 -100814419 + MIR SINE MIR 151 262 0 191 302 0 0 chr10 39502656 39502699 -100814066 + L2 LINE L2 3209 3251 -21 195 314 189 7 chr10 39503453 39503606 -100813159 + MIR SINE MIR 50 230 -32 194 83 56 0 chr10 39503719 39503755 -100813010 + (TCTCTG)n Simple_repeat Simple_repeat 4 41 0 466 349 64 18 chr10 39504002 39504220 -100812545 - MIR SINE MIR -4 258 31 2227 89 0 0 chr10 39504974 39505255 -100811510 + AluY SINE Alu 12 292 -19 39770 58 4 8 chr10 39505262 39507118 -100809647 + L1PA4 LINE L1 11 1874 -4281 4505 35 4 0 chr10 39507118 39507658 -100809107 - L1PA2 LINE L1 -4 6151 5610 39770 58 4 8 chr10 39507658 39511975 -100804790 + L1PA4 LINE L1 1874 6151 -4 260 300 73 38 chr10 39512746 39512900 -100803865 + MIR3 SINE MIR 13 174 -63 1852 181 32 3 chr10 39513267 39513605 -100803160 - MER7A DNA MER2_type 0 346 1 2417 73 0 0 chr10 39514057 39514357 -100802408 + AluY SINE Alu 1 300 -11 1196 245 68 91 chr10 39514416 39515432 -100801333 + L1MC4 LINE L1 7060 7995 0 258 327 82 31 chr10 39516639 39516715 -100800050 - L2 LINE L2 -11 3302 3231 2735 132 5 30 chr10 39516715 39517154 -100799611 + MSTA LTR MaLR 1 428 0 258 327 82 31 chr10 39517154 39517236 -100799529 - L2 LINE L2 -82 3231 3136 1437 167 155 20 chr10 39517551 39517893 -100798872 + MLT1B LTR MaLR 1 388 -2 25 0 0 0 chr10 39518153 39518178 -100798587 + AT_rich Low_complexity Low_complexity 1 25 0 212 276 0 23 chr10 39518699 39518786 -100797979 + (TA)n Simple_repeat Simple_repeat 2 86 0 29 28 0 0 chr10 39518933 39518969 -100797796 + AT_rich Low_complexity Low_complexity 1 36 0 393 191 0 0 chr10 39519037 39519142 -100797623 + (CA)n Simple_repeat Simple_repeat 1 105 0 39107 51 7 0 chr10 39520365 39525520 -100791245 + L1P LINE L1 2 5190 -956 201 349 116 23 chr10 39525536 39525665 -100791100 - MIR3 SINE MIR -10 198 58 497 329 65 22 chr10 39525706 39526046 -100790719 + L2 LINE L2 2748 3101 -212 283 230 31 126 chr10 39526061 39526387 -100790378 - L1M4 LINE L1 -1258 4888 4594 * 311 261 45 9 chr10 39526386 39526497 -100790268 - L1M4 LINE L1 -2492 3654 3540 850 216 39 86 chr10 39526498 39526900 -100789865 + MLT1A2 LTR MaLR 1 457 0 459 276 88 29 chr10 39527015 39527541 -100789224 - L1M4 LINE L1 -2694 3452 2896 369 0 0 0 chr10 39527546 39527587 -100789178 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 2053 150 7 0 chr10 39527590 39527896 -100788869 - AluSc SINE Alu -1 308 1 244 155 0 35 chr10 39527896 39527954 -100788811 - L1M4 LINE L1 -3237 2909 2854 1805 172 0 3 chr10 39528014 39528317 -100788448 + AluJb SINE Alu 1 302 -10 315 0 0 0 chr10 39528366 39528401 -100788364 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1980 118 25 0 chr10 39528410 39528690 -100788075 - AluSx SINE Alu -21 291 5 503 283 34 42 chr10 39528702 39528734 -100788031 - L1M4 LINE L1 -3326 2820 2789 453 36 0 0 chr10 39528734 39528789 -100787976 + (TA)n Simple_repeat Simple_repeat 1 55 0 503 283 34 42 chr10 39528789 39528844 -100787921 - L1M4 LINE L1 -3357 2789 2735 1701 151 34 14 chr10 39528844 39529136 -100787629 - AluJb SINE Alu -14 298 1 503 283 34 42 chr10 39529136 39529312 -100787453 - L1M4 LINE L1 -3411 2735 2558 449 248 45 41 chr10 39529379 39529708 -100787057 + MLT1C LTR MaLR 54 467 0 * 3566 181 23 20 chr10 39529706 39530236 -100786529 + Tigger2 DNA MER2_type 1 535 -2183 2022 120 53 0 chr10 39530236 39530520 -100786245 + AluSq SINE Alu 1 299 -14 3566 181 23 20 chr10 39530520 39530731 -100786034 + Tigger2 DNA MER2_type 535 744 -1974 1117 153 22 18 chr10 39530794 39531023 -100785742 + Tigger2 DNA MER2_type 2464 2693 -25 569 254 12 12 chr10 39531043 39531287 -100785478 - L1M4 LINE L1 -3646 2500 2257 * 5611 200 38 30 chr10 39531285 39533316 -100783449 - L1MB1 LINE L1 -200 5989 3940 2011 159 27 14 chr10 39533316 39533686 -100783079 - THE1C LTR MaLR 0 375 1 5611 200 38 30 chr10 39533686 39533778 -100782987 - L1MB1 LINE L1 -2249 3940 3850 2718 48 3 0 chr10 39533778 39534113 -100782652 + L1PA4 LINE L1 5820 6155 0 1052 311 94 24 chr10 39535378 39535879 -100780886 - MLT1H LTR MaLR 0 549 14 180 347 196 21 chr10 39535933 39536316 -100780449 + L2 LINE L2 627 1076 -2238 1446 173 53 50 chr10 39536387 39536688 -100780077 + AluJo SINE Alu 11 312 0 180 0 0 0 chr10 39536959 39536979 -100779786 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1256 223 37 7 chr10 39537939 39538208 -100778557 + AluJb SINE Alu 7 283 -29 210 71 0 0 chr10 39538208 39538236 -100778529 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 524 236 0 39 chr10 39538252 39538379 -100778386 + FLAM_A SINE Alu 6 127 -15 1655 156 46 23 chr10 39538999 39539301 -100777464 - AluJb SINE Alu 0 312 4 2201 117 0 3 chr10 39539674 39539973 -100776792 + AluSx SINE Alu 1 298 -14 2201 85 0 36 chr10 39540227 39540533 -100776232 - AluY SINE Alu -15 296 2 27 62 0 0 chr10 39540789 39540837 -100775928 + AT_rich Low_complexity Low_complexity 1 48 0 2171 102 0 3 chr10 39540991 39541324 -100775441 + AluY SINE Alu 1 332 0 505 215 71 92 chr10 39541527 39541853 -100774912 + MER114 LTR ERV 46 364 -284 2251 102 0 7 chr10 39542036 39542340 -100774425 - AluSg SINE Alu -8 302 1 595 140 10 0 chr10 39543831 39543931 -100772834 + MLT1E1 LTR MaLR 523 623 -31 1597 220 40 14 chr10 39544034 39544457 -100772308 + MER31B LTR ERV1 2 435 -31 2542 57 0 0 chr10 39546590 39546889 -100769876 + AluY SINE Alu 1 299 -12 292 259 33 33 chr10 39546950 39547154 -100769611 + L1ME LINE L1 5691 5894 -276 2084 123 0 0 chr10 39547258 39547551 -100769214 - AluSq SINE Alu -8 305 13 1942 92 0 4 chr10 39547552 39547802 -100768963 - AluSx SINE Alu -63 249 1 450 294 65 49 chr10 39547881 39548065 -100768700 + MIR SINE MIR 8 194 -68 2120 103 10 3 chr10 39548237 39548527 -100768238 + AluSq SINE Alu 1 292 -21 1101 157 131 0 chr10 39548667 39548858 -100767907 + AluJo SINE Alu 82 297 -15 2134 101 7 7 chr10 39550909 39551216 -100765549 + AluY SINE Alu 1 307 -4 2402 57 0 23 chr10 39551346 39551647 -100765118 - AluY SINE Alu -17 294 1 250 313 0 38 chr10 39552039 39552160 -100764605 - LTR67 LTR ERVL -23 534 417 640 219 8 0 chr10 39552160 39552279 -100764486 + FLAM_A SINE Alu 1 120 -13 1771 218 34 8 chr10 39552549 39552935 -100763830 - MSTD LTR MaLR 0 396 1 264 256 13 0 chr10 39553440 39553518 -100763247 + ERVL LTR ERVL 2744 2822 -2942 546 297 161 0 chr10 39553526 39553681 -100763084 + MER5A DNA MER1_type 9 188 -1 430 320 17 0 chr10 39553982 39554154 -100762611 + MIR SINE MIR 73 247 -15 942 218 39 4 chr10 39556134 39556391 -100760374 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 39556402 39556423 -100760342 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39556796 39556847 -100759918 + AT_rich Low_complexity Low_complexity 1 51 0 218 179 0 0 chr10 39557092 39557131 -100759634 + GA-rich Low_complexity Low_complexity 2 40 0 228 35 0 0 chr10 39557507 39557536 -100759229 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 25 31 0 0 chr10 39557689 39557721 -100759044 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr10 39557761 39557794 -100758971 + AT_rich Low_complexity Low_complexity 1 33 0 2196 113 3 10 chr10 39558353 39558664 -100758101 - AluSc SINE Alu 0 309 1 1613 171 49 11 chr10 39559173 39559460 -100757305 + AluJo SINE Alu 1 298 -14 848 292 73 27 chr10 39560393 39560655 -100756110 - MLT1J LTR MaLR -10 501 253 238 67 44 0 chr10 39560655 39560700 -100756065 + A-rich Low_complexity Low_complexity 2 48 0 848 292 73 27 chr10 39560700 39560916 -100755849 - MLT1J LTR MaLR -258 253 1 2188 112 0 3 chr10 39561118 39561413 -100755352 + AluSq SINE Alu 1 294 -19 234 310 0 10 chr10 39561723 39561823 -100754942 + (TA)n Simple_repeat Simple_repeat 1 99 0 258 206 29 0 chr10 39562194 39562262 -100754503 + LTR24C LTR ERV1 556 625 -10 2279 104 0 16 chr10 39564221 39564538 -100752227 + AluSx SINE Alu 1 312 0 270 299 28 0 chr10 39564604 39564748 -100752017 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 * 293 242 10 10 chr10 39564666 39564765 -100752000 + (TA)n Simple_repeat Simple_repeat 2 100 0 2165 191 63 35 chr10 39564765 39565340 -100751425 - LTR49 LTR ERV1 0 595 5 189 74 0 0 chr10 39565343 39565370 -100751395 + (TG)n Simple_repeat Simple_repeat 2 28 0 217 241 12 24 chr10 39565972 39566055 -100750710 + (TG)n Simple_repeat Simple_repeat 2 83 0 * 275 341 18 6 chr10 39566025 39566192 -100750573 + (TATATG)n Simple_repeat Simple_repeat 4 172 0 * 346 287 16 0 chr10 39566078 39566207 -100750558 + (TA)n Simple_repeat Simple_repeat 2 132 0 206 213 27 13 chr10 39566277 39566352 -100750413 + (TTTA)n Simple_repeat Simple_repeat 3 78 0 1899 112 0 8 chr10 39566957 39567217 -100749548 - AluSx SINE Alu -14 298 41 332 289 15 0 chr10 39567824 39567959 -100748806 + (TA)n Simple_repeat Simple_repeat 1 137 0 297 51 0 0 chr10 39567960 39567999 -100748766 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 183 129 0 0 chr10 39568063 39568094 -100748671 + (TA)n Simple_repeat Simple_repeat 1 31 0 251 154 15 0 chr10 39568884 39568949 -100747816 + (TA)n Simple_repeat Simple_repeat 1 66 0 24 77 0 0 chr10 39569161 39569213 -100747552 + AT_rich Low_complexity Low_complexity 1 52 0 40749 48 6 1 chr10 39569720 39575839 -100740926 - L1PA4 LINE L1 -1 6154 2 411 187 0 0 chr10 39577062 39577169 -100739596 + (TG)n Simple_repeat Simple_repeat 1 107 0 29 28 0 0 chr10 39577237 39577273 -100739492 + AT_rich Low_complexity Low_complexity 1 36 0 212 276 0 23 chr10 39577420 39577507 -100739258 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr10 39578028 39578053 -100738712 + AT_rich Low_complexity Low_complexity 1 25 0 1437 167 155 20 chr10 39578313 39578655 -100738110 - MLT1B LTR MaLR -2 388 1 258 327 82 31 chr10 39578970 39579052 -100737713 + L2 LINE L2 3136 3212 -101 2735 132 5 30 chr10 39579052 39579491 -100737274 - MSTA LTR MaLR 0 428 1 258 327 82 31 chr10 39579491 39579567 -100737198 + L2 LINE L2 3212 3302 -11 1143 245 72 92 chr10 39580774 39581786 -100734979 - L1MD3 LINE L1 0 8041 7060 2417 73 0 0 chr10 39581845 39582145 -100734620 - AluY SINE Alu -11 300 1 1852 181 32 3 chr10 39582597 39582935 -100733830 + MER7A DNA MER2_type 1 346 0 260 300 73 38 chr10 39583302 39583456 -100733309 - MIR3 SINE MIR -63 145 13 27068 46 4 3 chr10 39584227 39588559 -100728206 - L1PA4 LINE L1 -4 6151 1822 24 32 0 0 chr10 39588980 39589011 -100727754 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 39589449 39589470 -100727295 + (T)n Simple_repeat Simple_repeat 1 21 0 2229 101 0 10 chr10 39589773 39590080 -100726685 - AluSq SINE Alu -9 304 1 28 0 0 0 chr10 39590508 39590536 -100726229 + AT_rich Low_complexity Low_complexity 1 28 0 214 319 43 35 chr10 39590543 39590659 -100726106 + L2 LINE L2 2719 2835 -479 372 209 52 67 chr10 39590930 39591064 -100725701 - Charlie1 DNA MER1_type -959 1802 1671 22 56 0 0 chr10 39591847 39591883 -100724882 + AT_rich Low_complexity Low_complexity 1 36 0 2388 87 0 0 chr10 39592345 39592645 -100724120 + AluSq SINE Alu 1 300 -13 1570 180 3 21 chr10 39592650 39592989 -100723776 + L1MA5 LINE L1 5968 6300 0 200 336 78 35 chr10 39593220 39593336 -100723429 + MIR SINE MIR 20 140 -68 2063 128 7 3 chr10 39593519 39593816 -100722949 - AluSg SINE Alu -12 298 1 659 234 89 101 chr10 39593951 39594211 -100722554 + LTR24B LTR ERV1 150 405 -171 2408 60 0 16 chr10 39594211 39594525 -100722240 + AluY SINE Alu 1 309 -2 659 234 89 101 chr10 39594525 39594692 -100722073 + LTR24B LTR ERV1 405 572 -4 5118 192 75 35 chr10 39594740 39595726 -100721039 - L1MC3 LINE L1 -11 7774 6714 2257 105 7 0 chr10 39595726 39596021 -100720744 + AluSq SINE Alu 1 297 -16 5118 192 75 35 chr10 39596021 39596448 -100720317 - L1MC3 LINE L1 -1071 6714 6305 466 141 26 0 chr10 39596456 39596612 -100720153 + CT-rich Low_complexity Low_complexity 1 160 0 1843 121 66 0 chr10 39596612 39596869 -100719896 - AluSq SINE Alu -31 282 9 237 65 0 0 chr10 39596883 39596914 -100719851 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 2043 118 3 0 chr10 39597020 39597308 -100719457 + AluSx SINE Alu 23 311 -1 2281 98 0 43 chr10 39597342 39597667 -100719098 + AluSq SINE Alu 1 311 -2 1645 189 3 0 chr10 39597991 39598276 -100718489 + AluSq SINE Alu 2 287 -26 32 0 0 0 chr10 39598276 39598308 -100718457 + AT_rich Low_complexity Low_complexity 1 32 0 319 273 96 60 chr10 39599008 39599542 -100717223 - HAL1 LINE L1 -744 1763 1211 338 307 57 21 chr10 39599833 39599973 -100716792 - HAL1 LINE L1 -1606 901 757 512 16 0 0 chr10 39599999 39600063 -100716702 + L1PA4 LINE L1 6089 6152 -3 433 115 0 0 chr10 39600261 39600322 -100716443 - AluS SINE Alu -250 61 1 181 284 116 21 chr10 39601732 39601827 -100714938 - MIR SINE MIR -76 186 83 2183 110 7 0 chr10 39603214 39603523 -100713242 + AluY SINE Alu 1 311 0 2111 132 0 0 chr10 39604428 39604717 -100712048 - AluSg SINE Alu -21 289 1 255 157 0 0 chr10 39604959 39605010 -100711755 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 250 278 106 40 chr10 39605027 39605178 -100711587 - L2 LINE L2 -17 3296 3136 3536 216 37 24 chr10 39605538 39606268 -100710497 + L1MC3 LINE L1 6016 6762 -1023 1300 213 114 21 chr10 39606268 39606602 -100710163 + MLT1A1 LTR MaLR 1 365 0 3536 216 37 24 chr10 39606602 39606781 -100709984 + L1MC3 LINE L1 6762 6937 -848 2152 104 0 11 chr10 39607397 39607717 -100709048 + AluSx SINE Alu 1 317 0 434 290 59 35 chr10 39609213 39609382 -100707383 + MIR SINE MIR 89 261 -1 217 286 154 0 chr10 39609522 39609613 -100707152 + L2 LINE L2 2208 2312 -1002 230 266 138 11 chr10 39609906 39610000 -100706765 - LTR47A LTR ERVL -86 366 261 2864 164 17 67 chr10 39610249 39610523 -100706242 - LTR49-int LTR ERV1 -633 5698 5412 2283 97 27 0 chr10 39610523 39610821 -100705944 + AluSp SINE Alu 1 306 -7 2864 164 17 67 chr10 39610821 39611341 -100705424 - LTR49-int LTR ERV1 -919 5412 4868 2203 127 10 0 chr10 39611341 39611648 -100705117 - AluSx SINE Alu -2 310 1 2864 164 17 67 chr10 39611648 39611774 -100704991 - LTR49-int LTR ERV1 -1463 4868 3971 34 0 0 0 chr10 39611774 39611808 -100704957 + AT_rich Low_complexity Low_complexity 1 34 0 1428 171 24 99 chr10 39611810 39611985 -100704780 - L1MA3 LINE L1 -13 6292 6106 2108 116 18 0 chr10 39611985 39612270 -100704495 + AluSx SINE Alu 1 290 -22 1428 171 24 99 chr10 39612270 39612510 -100704255 - L1MA3 LINE L1 -199 6106 5908 2334 83 0 10 chr10 39612542 39612844 -100703921 - AluSq SINE Alu -14 299 1 2339 94 3 3 chr10 39612844 39613152 -100703613 - AluSp SINE Alu -5 308 1 26 30 0 0 chr10 39614088 39614121 -100702644 + AT_rich Low_complexity Low_complexity 1 33 0 257 49 0 0 chr10 39614175 39614216 -100702549 - AluSc SINE Alu -1 299 259 1500 113 5 23 chr10 39614216 39614301 -100702464 - AluSc SINE Alu -92 217 132 2091 139 3 0 chr10 39614301 39614604 -100702161 - AluSx SINE Alu -8 304 1 1500 113 5 23 chr10 39614604 39614739 -100702026 - AluSc SINE Alu -177 132 1 22 56 0 0 chr10 39614740 39614776 -100701989 + AT_rich Low_complexity Low_complexity 1 36 0 2062 103 21 10 chr10 39615002 39615293 -100701472 + AluSc SINE Alu 1 294 -15 21 0 0 0 chr10 39615416 39615437 -100701328 + AT_rich Low_complexity Low_complexity 1 21 0 1930 105 58 10 chr10 39615792 39616087 -100700678 + AluSx SINE Alu 1 309 -3 1789 177 7 0 chr10 39616089 39616434 -100700331 + AluJb SINE Alu 1 312 0 2363 67 7 13 chr10 39616690 39616990 -100699775 + AluY SINE Alu 1 298 -13 559 69 0 0 chr10 39617463 39617535 -100699230 + AluY SINE Alu 129 200 -111 28 48 0 0 chr10 39617995 39618037 -100698728 + AT_rich Low_complexity Low_complexity 1 42 0 1986 140 0 7 chr10 39618037 39618322 -100698443 - AluSx SINE Alu -25 287 5 2360 65 0 23 chr10 39618621 39618928 -100697837 - AluY SINE Alu -11 300 1 1874 81 85 0 chr10 39619636 39619923 -100696842 + AluY SINE Alu 1 309 0 403 229 46 23 chr10 39619925 39620056 -100696709 - LTR33A LTR ERVL -23 500 367 2312 109 0 10 chr10 39620617 39620929 -100695836 + AluSc SINE Alu 1 309 0 369 355 130 5 chr10 39620991 39621191 -100695574 + MIR SINE MIR 1 225 -37 2105 103 7 42 chr10 39621427 39621737 -100695028 - AluSx SINE Alu -13 299 1 839 158 0 0 chr10 39621836 39621969 -100694796 + AluSg/x SINE Alu 174 306 -4 2387 67 0 10 chr10 39622296 39622595 -100694170 + AluY SINE Alu 1 296 -15 31 26 0 0 chr10 39622709 39622747 -100694018 + AT_rich Low_complexity Low_complexity 1 38 0 354 268 55 0 chr10 39623516 39623643 -100693122 - MER117 DNA MER1_type -34 163 30 219 277 69 54 chr10 39623750 39623880 -100692885 - L3 LINE CR1 -275 1302 1171 372 133 0 0 chr10 39624051 39624111 -100692654 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 190 314 20 39 chr10 39624965 39625067 -100691698 + L3 LINE CR1 1200 1299 -278 236 323 100 31 chr10 39625113 39625243 -100691522 + L3 LINE CR1 1420 1558 -19 307 318 156 65 chr10 39625891 39626199 -100690566 - L2 LINE L2 -2 3270 2935 515 342 58 19 chr10 39626235 39626548 -100690217 - L2 LINE L2 -468 2846 2522 256 311 8 25 chr10 39626760 39626879 -100689886 + GA-rich Low_complexity Low_complexity 2 118 0 2409 60 27 0 chr10 39627076 39627374 -100689391 + AluY SINE Alu 1 306 -5 288 312 39 39 chr10 39627752 39628159 -100688606 + L1MEc LINE L1 1010 1416 -4980 23 0 0 0 chr10 39628256 39628279 -100688486 + AT_rich Low_complexity Low_complexity 1 23 0 2230 95 0 19 chr10 39628375 39628692 -100688073 - AluY SINE Alu 0 311 1 684 252 64 58 chr10 39628815 39629347 -100687418 + L1MEd LINE L1 662 1196 -4923 2071 98 7 0 chr10 39629371 39629646 -100687119 + AluSx SINE Alu 1 277 -35 863 164 24 128 chr10 39630064 39630393 -100686372 + L1M4 LINE L1 4210 4504 -1642 211 269 11 32 chr10 39630406 39630499 -100686266 + A-rich Low_complexity Low_complexity 2 92 0 724 75 0 0 chr10 39630729 39630823 -100685942 + AluSc SINE Alu 41 134 -175 1861 164 3 3 chr10 39630823 39631133 -100685632 + AluSg SINE Alu 1 310 0 1259 183 0 31 chr10 39631157 39631386 -100685379 - AluJo SINE Alu -20 292 71 427 321 52 21 chr10 39631394 39631587 -100685178 + MIR SINE MIR 28 226 -36 927 182 13 13 chr10 39633170 39633329 -100683436 - FRAM SINE Alu -16 160 2 1596 181 43 0 chr10 39633350 39633626 -100683139 - AluJb SINE Alu -24 288 1 21 0 0 0 chr10 39633631 39633652 -100683113 + AT_rich Low_complexity Low_complexity 1 21 0 1923 107 71 7 chr10 39633728 39634008 -100682757 - AluSg SINE Alu -12 298 1 1887 157 3 13 chr10 39635218 39635531 -100681234 - AluJb SINE Alu -2 310 1 2352 100 0 3 chr10 39636051 39636362 -100680403 + AluSg SINE Alu 1 310 0 309 283 123 9 chr10 39638813 39638919 -100677846 + L2 LINE L2 3193 3310 -3 389 185 12 25 chr10 39639306 39639387 -100677378 - MER3 DNA MER1_type -129 80 1 2186 102 0 7 chr10 39639468 39639763 -100677002 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39639801 39639822 -100676943 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39639878 39639918 -100676847 + AT_rich Low_complexity Low_complexity 1 40 0 2314 73 7 3 chr10 39640027 39640330 -100676435 - AluY SINE Alu -2 309 6 1042 83 8 0 chr10 39640335 39640467 -100676298 - AluY SINE Alu -178 133 1 2361 53 3 13 chr10 39640471 39640773 -100675992 - AluY SINE Alu 0 311 13 678 233 0 10 chr10 39640892 39641085 -100675680 + L1M4 LINE L1 4762 4952 -1194 1702 222 20 10 chr10 39641127 39641637 -100675128 + L1M4 LINE L1 2497 3011 -3135 1389 199 8 16 chr10 39641639 39641890 -100674875 + AluJo SINE Alu 40 288 -24 252 282 19 10 chr10 39641906 39642009 -100674756 + L1M4 LINE L1 3035 3138 -3008 2522 58 10 3 chr10 39642136 39642445 -100674320 - AluY SINE Alu 0 311 1 2296 75 0 10 chr10 39642457 39642752 -100674013 - AluY SINE Alu -19 292 1 1868 255 78 66 chr10 39642753 39643679 -100673086 + L1M4 LINE L1 3392 4336 -1810 2104 106 3 0 chr10 39643679 39644013 -100672752 + AluSx SINE Alu 1 335 0 1868 255 78 66 chr10 39644013 39644170 -100672595 + L1M4 LINE L1 4336 4490 -1656 2451 78 0 0 chr10 39644173 39644479 -100672286 + AluY SINE Alu 4 309 -2 308 301 65 0 chr10 39644486 39644579 -100672186 - L1M4 LINE L1 -1253 4893 4795 515 326 11 4 chr10 39644626 39644893 -100671872 - L1M4 LINE L1 -1359 4787 4519 475 164 35 0 chr10 39645046 39645162 -100671603 - L1M4 LINE L1 -2898 3248 3129 1431 212 14 7 chr10 39645348 39645636 -100671129 - AluJo SINE Alu -22 290 1 279 0 0 0 chr10 39645733 39645764 -100671001 + (CA)n Simple_repeat Simple_repeat 2 32 0 2281 76 0 3 chr10 39645780 39646068 -100670697 - AluY SINE Alu -24 287 1 2185 144 32 21 chr10 39646078 39646515 -100670250 - L1MA6 LINE L1 -3 6297 5856 556 164 8 16 chr10 39646518 39646640 -100670125 + L1MA6 LINE L1 5706 5826 -474 399 284 151 32 chr10 39647644 39647981 -100668784 - L1MCa LINE L1 -4448 1978 1203 2421 72 0 3 chr10 39648006 39648311 -100668454 - AluY SINE Alu -7 304 1 2025 134 0 3 chr10 39648370 39648678 -100668087 - AluSq SINE Alu 0 307 1 2089 98 7 26 chr10 39648698 39649004 -100667761 - AluSx SINE Alu -10 302 3 612 198 0 8 chr10 39649197 39649323 -100667442 - L1PB4 LINE L1 -5 6151 6027 606 90 0 0 chr10 39649323 39649412 -100667353 + AluSc SINE Alu 215 303 -6 556 106 0 32 chr10 39649413 39649507 -100667258 - L1PB4 LINE L1 -291 5865 5775 261 226 40 16 chr10 39649507 39649631 -100667134 + (TA)n Simple_repeat Simple_repeat 2 128 0 2398 158 13 4 chr10 39649633 39650101 -100666664 - L1PB4 LINE L1 -371 5785 5314 2237 233 84 9 chr10 39650097 39650779 -100665986 + L1PB4 LINE L1 4571 5303 -843 * 520 241 38 19 chr10 39651978 39652136 -100664629 - MER45A DNA AcHobo -17 161 1 23 0 0 0 chr10 39652368 39652391 -100664374 + AT_rich Low_complexity Low_complexity 1 23 0 3355 139 191 11 chr10 39653205 39653905 -100662860 - LTR1B LTR ERV1 0 826 1 2244 86 3 23 chr10 39654733 39655037 -100661728 - AluY SINE Alu -13 298 1 2259 118 0 0 chr10 39655159 39655456 -100661309 - AluSg SINE Alu -13 297 1 22 80 0 0 chr10 39655653 39655703 -100661062 + AT_rich Low_complexity Low_complexity 1 50 0 2352 84 3 0 chr10 39656450 39656747 -100660018 - AluY SINE Alu -13 298 1 1992 124 11 0 chr10 39656756 39657039 -100659726 - AluSx SINE Alu -26 286 1 745 257 6 6 chr10 39657039 39657222 -100659543 + MER58A DNA MER1_type 42 224 0 430 228 18 23 chr10 39657334 39657454 -100659311 + MLT1J2 LTR MaLR 37 151 -258 2586 48 0 10 chr10 39658893 39659207 -100657558 - AluY SINE Alu 0 311 1 232 174 22 0 chr10 39659825 39659871 -100656894 + (CA)n Simple_repeat Simple_repeat 1 47 0 2244 111 3 0 chr10 39661468 39661765 -100655000 + AluSp SINE Alu 1 298 -15 2406 100 7 0 chr10 39661981 39662282 -100654483 - AluSq SINE Alu -10 303 1 1864 260 69 55 chr10 39662282 39662421 -100654344 - L1MCb LINE L1 -3045 3519 3383 1986 171 0 0 chr10 39662421 39662726 -100654039 - AluSx SINE Alu -7 305 1 1864 260 69 55 chr10 39662726 39663209 -100653556 - L1MCb LINE L1 -3181 3383 2908 2222 119 0 0 chr10 39663209 39663503 -100653262 - AluSg SINE Alu -16 294 1 1864 260 69 55 chr10 39663503 39663972 -100652793 - L1MCb LINE L1 -3656 2908 2447 1618 188 32 0 chr10 39663972 39664254 -100652511 + AluSx SINE Alu 1 291 -21 1864 260 69 55 chr10 39664254 39665336 -100651429 - L1MCb LINE L1 -4117 2447 1382 2208 127 0 0 chr10 39665336 39665627 -100651138 - AluSx SINE Alu -21 291 1 1864 260 69 55 chr10 39665627 39666017 -100650748 - L1MCb LINE L1 -5182 1382 999 2261 95 0 3 chr10 39666017 39666311 -100650454 + AluY SINE Alu 1 293 -18 1864 260 69 55 chr10 39666311 39666533 -100650232 - L1MCb LINE L1 -5565 999 551 2250 104 0 3 chr10 39666617 39666916 -100649849 - AluSc SINE Alu -11 298 1 3085 226 42 59 chr10 39666930 39667599 -100649166 - L1MD1 LINE L1 -14 6622 5943 2081 122 3 0 chr10 39667599 39667914 -100648851 + AluSq SINE Alu 1 316 0 3085 226 42 59 chr10 39667914 39668137 -100648628 - L1MD1 LINE L1 -693 5943 5718 2088 146 0 0 chr10 39668137 39668438 -100648327 - AluSx SINE Alu -11 301 1 3085 226 42 59 chr10 39668438 39669102 -100647663 - L1MD1 LINE L1 -918 5718 5080 1700 193 56 134 chr10 39669100 39669696 -100647069 - L1MD1 LINE L1 -3190 3350 2709 * 2145 112 0 0 chr10 39669696 39669982 -100646783 + AluSc SINE Alu 1 286 -23 1700 193 56 134 chr10 39669982 39670354 -100646411 - L1MD1 LINE L1 -3831 2709 2490 2602 42 7 0 chr10 39670354 39670661 -100646104 - AluY SINE Alu -2 309 1 1700 193 56 134 chr10 39670661 39671012 -100645753 - L1MD1 LINE L1 -4050 2490 2113 2110 228 63 56 chr10 39671018 39671084 -100645681 - MER76 LTR ERV 0 688 624 3742 180 54 36 chr10 39671084 39671895 -100644870 - LTR1B LTR ERV1 0 826 1 2110 228 63 56 chr10 39671895 39672368 -100644397 - MER76 LTR ERV -64 624 139 2062 113 7 0 chr10 39672368 39672671 -100644094 + AluY SINE Alu 1 305 0 2110 228 63 56 chr10 39672671 39672809 -100643956 - MER76 LTR ERV -549 139 4 4502 229 62 56 chr10 39672817 39673233 -100643532 - L1MD1 LINE L1 -4448 2092 1680 2277 107 0 0 chr10 39673233 39673532 -100643233 - AluSq SINE Alu -14 299 1 4502 229 62 56 chr10 39673532 39675031 -100641734 - L1MD1 LINE L1 -4860 1680 18 1576 276 35 15 chr10 39675051 39675570 -100641195 - L1MCb LINE L1 -5471 574 46 979 42 17 0 chr10 39675815 39675935 -100640830 - L1PA8 LINE L1 -2 6170 6049 553 296 82 40 chr10 39675968 39676373 -100640392 - L1M4 LINE L1 -449 5729 5308 244 246 14 14 chr10 39677164 39677233 -100639532 + CT-rich Low_complexity Low_complexity 2 70 0 583 107 83 0 chr10 39677918 39678161 -100638604 + (TA)n Simple_repeat Simple_repeat 1 263 0 27 29 0 0 chr10 39678181 39678215 -100638550 + AT_rich Low_complexity Low_complexity 1 34 0 2239 103 7 3 chr10 39678215 39678525 -100638240 + AluSq SINE Alu 1 311 -2 368 179 34 0 chr10 39678569 39678686 -100638079 + (TA)n Simple_repeat Simple_repeat 1 121 0 2218 104 3 0 chr10 39679349 39679658 -100637107 - AluSg SINE Alu 0 310 1 225 298 0 32 chr10 39679658 39679698 -100637067 - MARNA DNA Mariner -88 498 458 2189 189 35 16 chr10 39679698 39680122 -100636643 - Tigger2a DNA MER2_type 0 434 3 225 298 0 32 chr10 39680122 39680169 -100636596 - MARNA DNA Mariner -128 458 414 274 209 143 11 chr10 39683082 39683173 -100633592 - MIR SINE MIR -114 148 46 766 203 19 61 chr10 39683586 39683798 -100632967 - L1MA8 LINE L1 -3 6288 6086 1265 288 126 17 chr10 39683942 39684692 -100632073 + L2 LINE L2 2251 3084 -229 2322 92 0 0 chr10 39684810 39685102 -100631663 - AluSg SINE Alu -17 293 2 366 213 25 12 chr10 39685112 39685192 -100631573 - Tigger5 DNA MER2_type -6 2317 2237 249 200 0 83 chr10 39685202 39685262 -100631503 - Tigger5 DNA MER2_type -2268 55 1 317 237 21 11 chr10 39685264 39685357 -100631408 + (TA)n Simple_repeat Simple_repeat 1 94 0 352 273 47 39 chr10 39685385 39685513 -100631252 + L2 LINE L2 3185 3313 0 2118 120 30 0 chr10 39685774 39686075 -100630690 - AluSx SINE Alu 0 312 3 22 0 0 0 chr10 39686207 39686229 -100630536 + AT_rich Low_complexity Low_complexity 1 22 0 263 330 54 9 chr10 39686367 39686479 -100630286 - MIR SINE MIR -71 137 21 243 61 0 0 chr10 39686977 39687010 -100629755 + (CA)n Simple_repeat Simple_repeat 1 33 0 300 333 123 9 chr10 39688645 39688759 -100628006 + MIR3 SINE MIR 34 160 -48 1702 121 4 0 chr10 39689071 39689302 -100627463 - AluSq SINE Alu -60 253 22 802 82 0 0 chr10 39689477 39689575 -100627190 - AluY SINE Alu -15 296 199 510 113 0 12 chr10 39689683 39689763 -100627002 - MADE1 DNA Mariner 0 80 2 885 160 7 0 chr10 39690401 39690551 -100626214 - AluSp/q SINE Alu -4 309 159 281 125 0 0 chr10 39690551 39690591 -100626174 - AluS SINE Alu -239 61 22 203 288 68 0 chr10 39690775 39690834 -100625931 + L3 LINE CR1 1513 1575 -2 209 327 167 6 chr10 39690912 39691074 -100625691 + MIR SINE MIR 5 192 -70 677 172 74 25 chr10 39691142 39691264 -100625501 - FLAM_C SINE Alu -11 132 5 27 81 0 0 chr10 39691296 39691358 -100625407 + AT_rich Low_complexity Low_complexity 1 62 0 2360 87 0 10 chr10 39691454 39691753 -100625012 + AluY SINE Alu 1 296 -15 1954 131 0 20 chr10 39692354 39692660 -100624105 - AluSx SINE Alu -12 300 1 191 290 58 0 chr10 39693985 39694054 -100622711 + L3 LINE CR1 1505 1577 0 186 348 11 43 chr10 39694181 39694273 -100622492 - MIR SINE MIR -131 131 43 824 287 84 69 chr10 39694719 39694982 -100621783 + L2 LINE L2 2475 2733 -580 2122 120 0 7 chr10 39694982 39695281 -100621484 + AluSc SINE Alu 1 297 -12 824 287 84 69 chr10 39695281 39695794 -100620971 + L2 LINE L2 2733 3313 0 2161 126 3 3 chr10 39696196 39696498 -100620267 + AluSg SINE Alu 1 302 -8 1561 151 28 21 chr10 39696614 39696905 -100619860 - L1 LINE L1 -1993 4153 3861 2881 236 24 8 chr10 39696911 39697702 -100619063 - L1 LINE L1 -2877 3269 2466 1462 178 32 124 chr10 39697702 39698112 -100618653 + MLT1B-int LTR MaLR 1364 1735 0 1471 172 42 135 chr10 39698112 39698542 -100618223 + MLT1B LTR MaLR 1 390 0 191 163 0 82 chr10 39698634 39698683 -100618082 + MIR3 SINE MIR 157 201 -7 6412 136 38 20 chr10 39698919 39699386 -100617379 - L1PB1 LINE L1 -3 6148 5691 2287 89 0 3 chr10 39699386 39699678 -100617087 - AluSc SINE Alu -18 291 1 6412 136 38 20 chr10 39699678 39699694 -100617071 - L1PB1 LINE L1 -460 5691 5677 2211 114 3 3 chr10 39699694 39700001 -100616764 - AluSx SINE Alu -5 307 1 6412 136 38 20 chr10 39700001 39701212 -100615553 - L1PB1 LINE L1 -474 5677 4413 770 243 114 64 chr10 39701289 39701647 -100615118 + MLT1J1 LTR MaLR 71 446 0 1355 247 26 106 chr10 39702388 39702964 -100613801 - L1M4 LINE L1 -2173 3973 3353 2128 71 0 51 chr10 39702964 39703283 -100613482 - AluY SINE Alu 0 305 2 1355 247 26 106 chr10 39703283 39703337 -100613428 - L1M4 LINE L1 -2793 3353 3296 2175 115 6 13 chr10 39703337 39703650 -100613115 - AluSx SINE Alu -1 311 1 1355 247 26 106 chr10 39703650 39704006 -100612759 - L1M4 LINE L1 -2850 3296 3067 1982 135 17 3 chr10 39704058 39704354 -100612411 + AluSg SINE Alu 1 300 -10 2155 139 0 0 chr10 39704363 39704673 -100612092 + AluSx SINE Alu 1 310 -2 2206 221 104 166 chr10 39704783 39704841 -100611924 - L1M4 LINE L1 -1612 4534 4474 2449 78 0 0 chr10 39704841 39705148 -100611617 - AluY SINE Alu -1 310 4 2206 221 104 166 chr10 39705148 39705308 -100611457 - L1M4 LINE L1 -1672 4474 4306 2114 106 3 0 chr10 39705308 39705642 -100611123 - AluSx SINE Alu 0 335 1 2206 221 104 166 chr10 39705642 39706569 -100610196 - L1M4 LINE L1 -1840 4306 3323 2315 75 0 10 chr10 39706569 39706864 -100609901 + AluY SINE Alu 1 292 -19 2206 221 104 166 chr10 39706864 39706876 -100609889 - L1M4 LINE L1 -2823 3323 3312 2535 58 10 3 chr10 39706876 39707185 -100609580 + AluY SINE Alu 1 311 0 2206 221 104 166 chr10 39707185 39707431 -100609334 - L1M4 LINE L1 -2834 3312 3052 1374 195 8 16 chr10 39707431 39707682 -100609083 - AluJo SINE Alu -24 288 40 2206 221 104 166 chr10 39707682 39708194 -100608571 - L1M4 LINE L1 -3094 3052 2497 753 233 0 10 chr10 39708236 39708394 -100608371 - L1M4 LINE L1 -1194 4952 4795 2723 189 58 18 chr10 39708394 39709179 -100607586 - L1MA8 LINE L1 -394 5789 4762 180 0 0 0 chr10 39709536 39709556 -100607209 + (TA)n Simple_repeat Simple_repeat 2 21 0 312 235 59 29 chr10 39709800 39709902 -100606863 + L2 LINE L2 3209 3313 0 2245 107 0 7 chr10 39710022 39710321 -100606444 + AluSg SINE Alu 1 297 -13 261 211 0 0 chr10 39710350 39710407 -100606358 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1904 173 45 8 chr10 39710418 39710800 -100605965 + L1MB3 LINE L1 5785 6180 -3 2355 107 3 0 chr10 39710809 39711118 -100605647 + AluSg SINE Alu 1 310 0 405 0 0 0 chr10 39711125 39711170 -100605595 + (TA)n Simple_repeat Simple_repeat 2 46 0 333 337 31 27 chr10 39711270 39711564 -100605201 - MARNA DNA Mariner -48 538 244 243 0 0 0 chr10 39711710 39711737 -100605028 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1851 107 4 25 chr10 39711741 39712022 -100604743 - AluSc SINE Alu -34 275 1 29 60 0 0 chr10 39712109 39712159 -100604606 + AT_rich Low_complexity Low_complexity 1 50 0 43570 49 6 1 chr10 39713637 39719760 -100597005 + L1PA2 LINE L1 1 6155 0 180 0 0 0 chr10 39719769 39719789 -100596976 + (A)n Simple_repeat Simple_repeat 1 20 0 13441 92 4 0 chr10 39719789 39721613 -100595152 - L1P LINE L1 -4304 1842 11 2225 89 0 0 chr10 39721620 39721901 -100594864 - AluY SINE Alu -19 292 12 476 349 64 18 chr10 39722655 39722873 -100593892 + MIR SINE MIR 31 258 -4 194 83 56 0 chr10 39723120 39723156 -100593609 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 180 200 0 0 chr10 39724143 39724183 -100592582 + CT-rich Low_complexity Low_complexity 2 41 0 1758 164 33 41 chr10 39724311 39724677 -100592088 + MLT1A1 LTR MaLR 1 363 -2 442 311 47 16 chr10 39724722 39724912 -100591853 - MIR SINE MIR -46 216 21 232 236 56 14 chr10 39725304 39725376 -100591389 - MIR SINE MIR -69 193 119 213 206 33 98 chr10 39725379 39725471 -100591294 - L3 LINE CR1 -166 1411 1326 218 344 54 11 chr10 39725657 39725750 -100591015 - L2 LINE L2 -4 3268 3172 220 93 256 0 chr10 39725869 39725912 -100590853 - MIR3 SINE MIR -33 175 122 591 239 29 58 chr10 39726254 39726459 -100590306 + MER20 DNA MER1_type 1 199 -20 243 220 68 0 chr10 39726658 39726717 -100590048 + L2 LINE L2 3209 3271 -1 2235 91 3 0 chr10 39726825 39727112 -100589653 - AluSq SINE Alu -12 301 14 1171 27 0 14 chr10 39727112 39727260 -100589505 + L1PA4 LINE L1 6009 6154 -1 24 77 0 0 chr10 39727767 39727819 -100588946 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39728031 39728096 -100588669 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39728886 39728917 -100587848 + (TA)n Simple_repeat Simple_repeat 1 31 0 297 51 0 0 chr10 39728981 39729020 -100587745 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39729021 39729156 -100587609 + (TA)n Simple_repeat Simple_repeat 2 138 0 1851 111 0 11 chr10 39729763 39730024 -100586741 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39730629 39730704 -100586061 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39730774 39730956 -100585809 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39730926 39731009 -100585756 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 519 117 0 0 chr10 39731397 39731474 -100585291 - AluS SINE Alu -236 77 1 406 104 45 0 chr10 39731496 39731563 -100585202 - MER41B LTR ERV1 -87 548 479 1963 127 29 23 chr10 39731714 39732022 -100584743 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 39732219 39732247 -100584518 + AT_rich Low_complexity Low_complexity 1 28 0 564 268 109 5 chr10 39732714 39732934 -100583831 + L1ME3A LINE L1 5364 5606 -556 682 271 21 50 chr10 39733042 39733382 -100583383 + L1ME3A LINE L1 5611 5940 -230 295 338 52 42 chr10 39734718 39734931 -100581834 + MIR SINE MIR 20 234 -28 219 204 0 0 chr10 39735470 39735514 -100581251 - L2 LINE L2 -7 3306 3263 313 369 72 22 chr10 39735624 39735846 -100580919 + MIR SINE MIR 4 236 -26 623 325 26 18 chr10 39737297 39737525 -100579240 - MIR SINE MIR -30 232 3 189 214 0 54 chr10 39737734 39737790 -100578975 + MIR SINE MIR 203 255 -7 44 35 0 0 chr10 39738996 39739054 -100577711 + AT_rich Low_complexity Low_complexity 1 58 0 335 313 15 80 chr10 39739061 39739262 -100577503 - HAL1 LINE L1 -96 2411 2224 386 287 174 6 chr10 39740795 39740962 -100575803 - MIR SINE MIR -34 228 34 318 326 56 0 chr10 39741144 39741233 -100575532 - L2 LINE L2 -36 3236 3143 627 267 87 20 chr10 39741269 39741464 -100575301 - MLT1J2 LTR MaLR 0 450 243 492 222 28 9 chr10 39741475 39741583 -100575182 - MLT1J2 LTR MaLR -340 110 1 3928 190 57 8 chr10 39741788 39742539 -100574226 - MER21B LTR ERV1 -75 788 1 188 333 126 0 chr10 39742539 39742674 -100574091 - L2 LINE L2 -61 3252 3101 24 0 0 0 chr10 39742879 39742903 -100573862 + AT_rich Low_complexity Low_complexity 1 24 0 201 286 209 0 chr10 39743155 39743260 -100573505 - L2 LINE L2 -842 2472 2346 23 0 0 0 chr10 39743364 39743387 -100573378 + AT_rich Low_complexity Low_complexity 1 23 0 221 326 111 7 chr10 39743502 39743637 -100573128 - MIR SINE MIR -70 192 44 32 86 0 0 chr10 39743896 39743977 -100572788 + AT_rich Low_complexity Low_complexity 1 81 0 194 319 77 44 chr10 39744313 39744404 -100572361 - L2 LINE L2 0 3272 3179 448 248 18 9 chr10 39744492 39744601 -100572164 - L2 LINE L2 -5 3308 3199 2011 107 68 0 chr10 39744602 39744883 -100571882 - AluSc SINE Alu -9 300 1 216 0 0 0 chr10 39744893 39744917 -100571848 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 911 74 8 0 chr10 39744921 39745043 -100571722 - L1P3 LINE L1 -574 5598 5476 4415 37 4 4 chr10 39745043 39745578 -100571187 + L1PA8 LINE L1 5635 6171 -1 252 340 215 0 chr10 39745670 39745814 -100570951 - L2 LINE L2 -296 3017 2843 279 304 22 0 chr10 39745949 39746041 -100570724 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 233 276 17 0 chr10 39746043 39746101 -100570664 + GA-rich Low_complexity Low_complexity 3 61 0 308 230 53 53 chr10 39746103 39746216 -100570549 + L1MD3 LINE L1 7656 7980 -15 417 282 123 21 chr10 39746264 39746463 -100570302 + MIR SINE MIR 36 261 -1 303 364 33 0 chr10 39746618 39746739 -100570026 - L2 LINE L2 -11 3261 3137 280 318 15 145 chr10 39747170 39747570 -100569195 - L3 LINE CR1 -229 1348 1001 24 32 0 0 chr10 39747663 39747694 -100569071 + AT_rich Low_complexity Low_complexity 1 31 0 1597 196 141 0 chr10 39748087 39748434 -100568331 + MSTD LTR MaLR 1 396 0 388 339 85 22 chr10 39748723 39748947 -100567818 - MIR SINE MIR 0 262 25 482 327 84 63 chr10 39748969 39749351 -100567414 - L2 LINE L2 -7 3306 2917 2147 221 75 0 chr10 39750118 39750588 -100566177 - MLT1D LTR MaLR 0 505 1 411 318 39 31 chr10 39750846 39751104 -100565661 - MIR SINE MIR 0 262 3 707 256 163 0 chr10 39752543 39752746 -100564019 - MIR SINE MIR -25 237 2 2129 135 3 0 chr10 39753462 39753765 -100563000 + AluSx SINE Alu 1 304 -8 2757 222 50 12 chr10 39753896 39754751 -100562014 + L1MB7 LINE L1 5281 6168 -16 1442 175 73 110 chr10 39755377 39755840 -100560925 + MLT1D LTR MaLR 1 446 -59 6613 152 18 14 chr10 39755867 39758079 -100558686 + L1MA4 LINE L1 4082 6300 0 351 65 0 0 chr10 39759138 39759184 -100557581 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 354 326 74 0 chr10 39760407 39760542 -100556223 - MIR SINE MIR -47 215 71 247 264 88 0 chr10 39760593 39760684 -100556081 - MIR SINE MIR -70 192 94 1467 131 146 11 chr10 39761275 39761542 -100555223 + AluSq SINE Alu 1 303 0 1406 248 35 5 chr10 39762641 39762781 -100553984 + MLT1C LTR MaLR 53 187 -280 501 17 0 0 chr10 39762781 39762839 -100553926 + (CA)n Simple_repeat Simple_repeat 2 59 0 1406 248 35 5 chr10 39762839 39763093 -100553672 + MLT1C LTR MaLR 187 459 -8 297 311 54 81 chr10 39763244 39763466 -100553299 - MIR SINE MIR -11 251 36 194 350 144 21 chr10 39764850 39765238 -100551527 + L2 LINE L2 2451 2886 -428 2439 81 0 0 chr10 39765357 39765654 -100551111 + AluSg1 SINE Alu 1 297 -12 1975 145 14 0 chr10 39765862 39766152 -100550613 - MER1B DNA MER1_type 0 339 46 1357 214 83 36 chr10 39766472 39766808 -100549957 + MLT1A2 LTR MaLR 23 374 0 191 368 35 21 chr10 39767624 39767768 -100548997 - L2 LINE L2 0 3313 3168 239 341 0 12 chr10 39767963 39768045 -100548720 + MIR3 SINE MIR 15 95 -113 396 268 30 61 chr10 39768228 39768392 -100548373 - MER5B DNA MER1_type -1 177 19 216 376 112 35 chr10 39768539 39768597 -100548168 + L2 LINE L2 2906 2958 -314 2004 155 0 3 chr10 39768597 39768906 -100547859 - AluSc SINE Alu -1 308 1 216 376 112 35 chr10 39768906 39769187 -100547578 + L2 LINE L2 2958 3271 -1 3900 129 91 66 chr10 39769910 39770978 -100545787 - pTR5 LTR ERV1 0 2438 59 1074 172 116 14 chr10 39821003 39821218 -100495547 + AluJo SINE Alu 53 289 -23 223 356 56 11 chr10 39821431 39821521 -100495244 + L2 LINE L2 3143 3236 -36 1980 182 64 18 chr10 39822432 39822982 -100493783 + L1M1 LINE L1 2138 2712 -4853 288 35 0 103 chr10 39822982 39823040 -100493725 + AluSq/x SINE Alu 87 138 -164 1804 127 36 23 chr10 39823044 39823351 -100493414 + AluSx SINE Alu 1 311 -1 277 307 60 23 chr10 39823910 39824128 -100492637 + L1ME LINE L1 5547 5772 -349 1806 128 3 113 chr10 39824163 39824507 -100492258 + AluSp SINE Alu 1 306 -7 1837 146 32 4 chr10 39824732 39825013 -100491752 - AluSq SINE Alu -24 289 1 292 253 0 0 chr10 39825063 39825138 -100491627 + MER46C DNA MER2_type 219 293 -45 2310 111 0 0 chr10 39825275 39825572 -100491193 + AluSc SINE Alu 3 299 -10 1157 145 0 0 chr10 39825743 39825909 -100490856 - AluSg/x SINE Alu -18 294 129 1657 179 14 10 chr10 39825951 39826248 -100490517 - AluJo SINE Alu -12 300 3 2069 138 0 0 chr10 39826450 39826747 -100490018 - AluSx SINE Alu -15 297 1 25 65 0 0 chr10 39826831 39826877 -100489888 + AT_rich Low_complexity Low_complexity 1 46 0 264 30 0 0 chr10 39827996 39828029 -100488736 + (CA)n Simple_repeat Simple_repeat 2 34 0 34 24 0 0 chr10 39828029 39828070 -100488695 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 39828138 39828161 -100488604 + AT_rich Low_complexity Low_complexity 1 23 0 1971 181 59 17 chr10 39828284 39828693 -100488072 + MSTB LTR MaLR 1 426 0 2091 98 7 7 chr10 39829474 39829770 -100486995 + AluY SINE Alu 1 296 -15 32 0 0 0 chr10 39830703 39830735 -100486030 + AT_rich Low_complexity Low_complexity 1 32 0 2089 120 0 3 chr10 39830797 39831124 -100485641 + AluY SINE Alu 1 311 0 330 331 78 24 chr10 39831138 39831304 -100485461 + MIR SINE MIR 62 236 -26 1067 195 87 30 chr10 39831950 39832195 -100484570 + L1MEc LINE L1 2000 2274 -4122 1924 122 45 3 chr10 39832195 39832483 -100484282 + AluSg SINE Alu 1 300 -10 1067 195 87 30 chr10 39832483 39832606 -100484159 + L1MEc LINE L1 2274 2389 -4007 416 311 173 38 chr10 39832618 39833271 -100483494 - L2 LINE L2 -354 2960 2220 205 331 41 16 chr10 39833920 39834041 -100482724 - MIR SINE MIR -32 230 107 200 289 0 24 chr10 39834544 39834627 -100482138 + MIR SINE MIR 155 235 -27 381 43 0 0 chr10 39834731 39834778 -100481987 + (TG)n Simple_repeat Simple_repeat 2 48 0 211 350 41 0 chr10 39835263 39835360 -100481405 - L2 LINE L2 -528 2786 2686 736 315 99 41 chr10 39835370 39835884 -100480881 + L2 LINE L2 2432 2975 -339 190 242 15 61 chr10 39836146 39836212 -100480553 - L2 LINE L2 -84 3229 3167 345 366 84 0 chr10 39836853 39837055 -100479710 - MIR SINE MIR -42 220 2 22 35 0 0 chr10 39837057 39837086 -100479679 + AT_rich Low_complexity Low_complexity 1 29 0 1508 193 28 43 chr10 39837937 39838331 -100478434 - MER89 LTR ERV1 0 559 172 206 309 128 0 chr10 39838426 39838520 -100478245 - L2 LINE L2 -262 3010 2905 925 226 26 52 chr10 39839200 39839389 -100477376 + MER58A DNA MER1_type 1 184 -2236 2244 114 0 0 chr10 39839389 39839697 -100477068 - AluSg SINE Alu -2 308 1 925 226 26 52 chr10 39839697 39839737 -100477028 + MER58A DNA MER1_type 184 224 0 213 207 52 0 chr10 39839838 39839896 -100476869 - MIR SINE MIR -102 160 100 213 391 51 7 chr10 39840187 39840325 -100476440 + MIR SINE MIR 44 187 -75 788 297 60 87 chr10 39840333 39840942 -100475823 - L2 LINE L2 -5 3308 2715 193 338 26 0 chr10 39841316 39841393 -100475372 + L2 LINE L2 2708 2786 -528 357 109 0 0 chr10 39841879 39841934 -100474831 + (CA)n Simple_repeat Simple_repeat 2 56 0 200 289 0 24 chr10 39842044 39842127 -100474638 - MIR SINE MIR -27 235 155 205 331 41 16 chr10 39842629 39842750 -100474015 + MIR SINE MIR 107 230 -32 470 314 159 45 chr10 39843399 39844178 -100472587 + L2 LINE L2 2220 3081 -191 2225 287 258 14 chr10 39844366 39845697 -100471068 + L2 LINE L2 1375 3032 -281 2263 149 37 1 chr10 39845697 39846424 -100470341 - L1PB1 LINE L1 -554 5597 4852 3774 102 0 11 chr10 39846431 39846973 -100469792 + L1PB1 LINE L1 5615 6150 -1 2658 94 3 0 chr10 39847248 39847598 -100469167 + THE1A LTR MaLR 5 355 0 698 229 252 14 chr10 39847801 39848225 -100468540 + L1M4 LINE L1 4411 4935 -1211 335 250 62 7 chr10 39848303 39848447 -100468318 + L1MA10 LINE L1 6181 6332 -2 549 305 51 58 chr10 39848466 39848758 -100468007 + L2 LINE L2 3022 3311 -2 315 300 168 11 chr10 39849003 39849193 -100467572 - L1ME4a LINE L1 -8 6113 5894 274 268 70 0 chr10 39850566 39850637 -100466128 - L2 LINE L2 0 3313 3238 551 292 74 10 chr10 39850809 39851011 -100465754 + MIR SINE MIR 32 246 -16 4168 179 22 39 chr10 39851255 39852041 -100464724 - L1MB3 LINE L1 -7 6176 5378 2597 97 6 0 chr10 39852041 39852392 -100464373 - THE1A LTR MaLR -2 353 1 11473 102 6 8 chr10 39852393 39853974 -100462791 - THE1A-int LTR MaLR -1 1579 1 2606 74 14 0 chr10 39853974 39854324 -100462441 - THE1A LTR MaLR 0 355 1 4168 179 22 39 chr10 39854324 39854452 -100462313 - L1MB3 LINE L1 -803 5380 5275 191 314 113 32 chr10 39855186 39855310 -100461455 + MIR SINE MIR 70 203 -59 3102 234 90 78 chr10 39855728 39856308 -100460457 + L1M4 LINE L1 3067 3638 -2508 2187 117 0 0 chr10 39856308 39856598 -100460167 + AluSg SINE Alu 10 299 -11 7123 48 3 5 chr10 39856598 39858179 -100458586 + L1PA6 LINE L1 4570 6149 -5 3102 234 90 78 chr10 39858179 39859413 -100457352 + L1M4 LINE L1 3637 4904 -1242 7818 18 0 3 chr10 39859427 39861121 -100455644 - L1PA2 LINE L1 0 6155 4465 6051 32 0 0 chr10 39861121 39861869 -100454896 + L1PA2 LINE L1 3700 4447 -1699 2157 68 61 7 chr10 39861869 39862164 -100454601 - AluY SINE Alu 0 311 1 948 222 42 14 chr10 39862203 39862487 -100454278 + L1MD1 LINE L1 5945 6236 -6 2248 105 0 0 chr10 39862577 39862871 -100453894 - AluSc SINE Alu -15 294 1 265 382 83 0 chr10 39862919 39863063 -100453702 - MIR SINE MIR 0 262 107 1954 119 3 60 chr10 39863063 39863382 -100453383 + AluSx SINE Alu 1 301 -11 233 330 71 9 chr10 39863422 39863534 -100453231 - MIR SINE MIR -142 120 2 180 0 0 0 chr10 39863641 39863661 -100453104 + (A)n Simple_repeat Simple_repeat 1 20 0 215 287 69 23 chr10 39865848 39865935 -100450830 - MIR SINE MIR -13 249 159 674 292 51 97 chr10 39866007 39866758 -100450007 + L2 LINE L2 2559 3288 -25 359 245 90 75 chr10 39867152 39867352 -100449413 + LTR33 LTR ERVL 61 263 -258 264 77 0 0 chr10 39867438 39867477 -100449288 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 1964 194 45 56 chr10 39868318 39868783 -100447982 - MLT2B3 LTR ERVL -20 534 75 307 225 0 0 chr10 39868881 39868952 -100447813 - MLT2B3 LTR ERVL -483 71 1 412 307 28 40 chr10 39869246 39869422 -100447343 - MIR SINE MIR -10 252 79 819 71 100 7 chr10 39869422 39869562 -100447203 - pTR5 LTR ERV1 -2237 201 49 318 250 0 0 chr10 39869562 39869646 -100447119 - LTR30 LTR ERV1 -98 624 541 2968 149 102 22 chr10 39869646 39870424 -100446341 - pTR5 LTR ERV1 -440 1682 119 518 112 0 0 chr10 39870428 39870517 -100446248 - pTR5 LTR ERV1 -1606 832 744 427 303 141 21 chr10 39870517 39870751 -100446014 - MIR SINE MIR 0 262 1 432 322 33 17 chr10 39870961 39871150 -100445615 + MIR SINE MIR 37 235 -27 236 340 50 0 chr10 39872152 39872252 -100444513 + MIR SINE MIR 118 222 -40 201 317 146 0 chr10 39872419 39872501 -100444264 - MIR SINE MIR -6 256 163 570 321 39 25 chr10 39873502 39873910 -100442855 + L1ME3A LINE L1 5483 5896 -274 482 201 0 15 chr10 39874003 39874137 -100442628 + L1PB4 LINE L1 3355 3486 -2660 * 4344 186 21 19 chr10 39874129 39875558 -100441207 + L1PB4 LINE L1 4729 6154 -2 405 164 0 0 chr10 39875818 39875891 -100440874 + (TA)n Simple_repeat Simple_repeat 2 74 0 1921 94 12 8 chr10 39875891 39876145 -100440620 - AluSg SINE Alu -55 255 1 201 300 86 0 chr10 39876934 39877004 -100439761 - L2 LINE L2 -25 3288 3213 2270 44 40 0 chr10 39877561 39878013 -100438752 + AluY SINE Alu 1 463 0 540 332 27 18 chr10 39878104 39878327 -100438438 - MIR SINE MIR -1 261 37 7744 16 0 0 chr10 39878936 39880346 -100436419 - L1PA2 LINE L1 -3 6152 4740 198 300 62 0 chr10 39881648 39881728 -100435037 + MIR SINE MIR 81 165 -97 1105 268 14 83 chr10 39882010 39882446 -100434319 + MLT1H LTR MaLR 11 416 -133 2292 103 0 0 chr10 39882744 39883035 -100433730 - AluSg SINE Alu -19 291 1 187 355 73 0 chr10 39883073 39883183 -100433582 - L2 LINE L2 -585 2729 2612 1969 109 0 8 chr10 39884008 39884264 -100432501 + AluSg SINE Alu 43 296 -14 265 314 38 9 chr10 39884278 39884383 -100432382 - MIR SINE MIR -148 114 7 273 336 26 9 chr10 39884557 39884673 -100432092 + MIR SINE MIR 1 118 -144 219 333 0 33 chr10 39884778 39884868 -100431897 + L2 LINE L2 3224 3310 -3 526 289 117 8 chr10 39885083 39885322 -100431443 - MER46C DNA MER2_type -66 272 8 391 316 153 58 chr10 39887058 39887384 -100429381 + L2 LINE L2 2916 3272 0 2391 97 3 0 chr10 39888107 39888415 -100428350 - AluSc SINE Alu 0 309 1 296 217 0 0 chr10 39888780 39888843 -100427922 - MIR SINE MIR -98 110 58 322 310 35 9 chr10 39889199 39889315 -100427450 - MIR SINE MIR -30 232 114 193 317 42 33 chr10 39889322 39889442 -100427323 - L2 LINE L2 -1018 2296 2176 422 355 16 67 chr10 39890381 39890652 -100426113 - MIR SINE MIR -1 261 5 222 209 0 0 chr10 39890655 39890698 -100426067 + (CATA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr10 39890802 39890824 -100425941 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr10 39890960 39890999 -100425766 + AT_rich Low_complexity Low_complexity 1 39 0 192 77 0 0 chr10 39891559 39891585 -100425180 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 659 156 17 28 chr10 39891595 39891774 -100424991 + CT-rich Low_complexity Low_complexity 4 180 0 1146 186 14 23 chr10 39891788 39892008 -100424757 - AluJo SINE Alu -90 222 5 356 263 40 0 chr10 39892010 39892109 -100424656 + MIR SINE MIR 90 192 -70 430 321 106 13 chr10 39892552 39892789 -100423976 - MIR SINE MIR -1 261 3 209 179 0 0 chr10 39893514 39893553 -100423212 + (TG)n Simple_repeat Simple_repeat 2 40 0 241 230 0 23 chr10 39893799 39893886 -100422879 + CT-rich Low_complexity Low_complexity 3 87 0 365 270 109 7 chr10 39894082 39894219 -100422546 + MIR SINE MIR 49 199 -63 259 320 127 39 chr10 39894229 39894410 -100422355 - MIR SINE MIR -20 242 46 269 326 77 44 chr10 39895012 39895193 -100421572 + L2 LINE L2 2636 2822 -492 350 393 64 45 chr10 39895264 39895638 -100421127 + L2 LINE L2 2892 3272 0 238 392 10 0 chr10 39895677 39895774 -100420991 - L2 LINE L2 -18 3254 3157 38139 72 6 1 chr10 39895811 39901555 -100415210 + L1PA5 LINE L1 1 5778 -377 * 41492 46 1 2 chr10 39901554 39907710 -100409055 + L1PA3 LINE L1 1 6152 -3 3073 38 3 0 chr10 39907752 39908125 -100408640 + L1PA5 LINE L1 5770 6143 -11 33 25 0 0 chr10 39908125 39908165 -100408600 + AT_rich Low_complexity Low_complexity 1 40 0 1954 107 3 76 chr10 39908370 39908687 -100408078 + AluSg1 SINE Alu 1 294 -15 258 233 33 0 chr10 39908689 39908749 -100408016 + L1ME3A LINE L1 6051 6112 -58 306 277 18 18 chr10 39909564 39909676 -100407089 + GA-rich Low_complexity Low_complexity 4 115 0 336 313 44 38 chr10 39909708 39909868 -100406897 + MIR SINE MIR 17 177 -85 1694 167 51 0 chr10 39909885 39910178 -100406587 + AluSx SINE Alu 1 308 -4 308 311 13 93 chr10 39910705 39910856 -100405909 + MER5B DNA MER1_type 10 148 -30 334 330 73 6 chr10 39910887 39911066 -100405699 - L1MC5 LINE L1 -60 7901 7711 2078 175 29 3 chr10 39911104 39911486 -100405279 - L1PA15 LINE L1 -1 6164 5773 226 139 0 0 chr10 39911539 39911575 -100405190 - MER5B DNA MER1_type -140 38 3 * 276 330 104 17 chr10 39911575 39911689 -100405076 - MIR3 SINE MIR -48 160 37 236 265 26 43 chr10 39911923 39912040 -100404725 + MIR SINE MIR 104 218 -44 263 272 102 85 chr10 39912469 39912685 -100404080 + MIR SINE MIR 55 262 0 700 246 170 18 chr10 39913293 39913517 -100403248 + MIR SINE MIR 5 262 0 2503 197 21 55 chr10 39913539 39914060 -100402705 - L1MA7 LINE L1 -2 6289 5795 2213 125 0 6 chr10 39914060 39914371 -100402394 - AluSg SINE Alu -1 309 1 2503 197 21 55 chr10 39914371 39914524 -100402241 - L1MA7 LINE L1 -496 5795 5638 1209 177 36 0 chr10 39914531 39914780 -100401985 + L1 LINE L1 5101 5358 -788 369 0 0 0 chr10 39915606 39915647 -100401118 + (A)n Simple_repeat Simple_repeat 1 41 0 5313 37 2 6 chr10 39915703 39916348 -100400417 - L1PA4 LINE L1 -5 6150 5509 5941 42 0 0 chr10 39916348 39917241 -100399524 + L1PA4 LINE L1 4624 5516 -638 24 32 0 0 chr10 39917866 39917897 -100398868 + AT_rich Low_complexity Low_complexity 1 31 0 358 286 138 48 chr10 39918334 39918603 -100398162 + MER102b DNA MER1_type 48 340 -1 223 345 12 0 chr10 39918744 39918828 -100397937 + MIR SINE MIR 157 241 -21 276 293 163 0 chr10 39920055 39920178 -100396587 + MIR3 SINE MIR 39 181 -27 267 337 0 0 chr10 39920372 39920470 -100396295 + (TCCA)n Simple_repeat Simple_repeat 1 98 0 222 37 0 0 chr10 39920872 39920899 -100395866 + (TC)n Simple_repeat Simple_repeat 1 27 0 308 303 139 0 chr10 39920986 39921108 -100395657 - MIR SINE MIR -41 221 83 197 197 280 0 chr10 39921528 39921627 -100395138 - MIR SINE MIR -65 197 64 410 305 146 18 chr10 39921841 39922067 -100394698 - MIR SINE MIR -7 255 1 624 183 14 81 chr10 39922138 39922357 -100394408 + MER106A DNA MER1_type 1 199 -37 293 322 52 35 chr10 39922668 39922783 -100393982 - L2 LINE L2 -7 3265 3149 202 391 0 0 chr10 39923186 39923250 -100393515 - L2 LINE L2 -8 3264 3201 190 294 29 15 chr10 39923439 39923507 -100393258 - MIR SINE MIR -113 149 81 385 184 35 57 chr10 39924030 39924171 -100392594 - L1ME4a LINE L1 -22 6099 5962 407 349 20 48 chr10 39924456 39924705 -100392060 - L2 LINE L2 -4 3268 3027 226 301 41 57 chr10 39924980 39925103 -100391662 - L1ME4a LINE L1 -2154 5654 5534 336 359 36 48 chr10 39925136 39925384 -100391381 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 39926103 39926257 -100390508 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 39926314 39926362 -100390403 + AT_rich Low_complexity Low_complexity 1 48 0 194 333 103 0 chr10 39926499 39926586 -100390179 + MIR SINE MIR 40 135 -73 958 236 69 5 chr10 39927793 39927996 -100388769 + MER58A DNA MER1_type 1 216 -8 355 314 14 43 chr10 39928457 39928597 -100388168 + L2 LINE L2 3137 3272 0 435 335 55 62 chr10 39928711 39929111 -100387654 + MLT1J LTR MaLR 110 506 -5 2106 116 0 11 chr10 39929197 39929481 -100387284 + AluSq SINE Alu 1 281 -32 324 352 64 30 chr10 39929548 39929781 -100386984 - MIR SINE MIR -15 247 7 1637 174 38 40 chr10 39930130 39930503 -100386262 + MLT1A2 LTR MaLR 1 372 -2 200 385 31 19 chr10 39931261 39931422 -100385343 - MIR SINE MIR -99 163 1 245 386 85 11 chr10 39931667 39931856 -100384909 - L3 LINE CR1 -1 1576 1374 698 339 5 5 chr10 39931861 39932082 -100384683 + MIR SINE MIR 23 243 -19 2007 123 10 3 chr10 39932113 39932405 -100384360 - AluSg SINE Alu -16 294 1 216 326 81 91 chr10 39932999 39933220 -100383545 + L2 LINE L2 3038 3256 -16 321 345 7 22 chr10 39933275 39933414 -100383351 - MIR3 SINE MIR -69 139 3 2465 40 0 17 chr10 39933467 39933768 -100382997 - AluY SINE Alu -15 296 1 492 298 77 34 chr10 39933957 39934192 -100382573 - MIR SINE MIR -10 252 8 950 296 94 27 chr10 39935132 39935534 -100381231 - LTR16A LTR ERVL -6 444 16 241 227 0 0 chr10 39935737 39935781 -100380984 + polypurine Low_complexity Low_complexity 3 46 0 2016 113 33 3 chr10 39936636 39936936 -100379829 + AluSc SINE Alu 1 309 0 206 183 21 21 chr10 39937079 39937172 -100379593 + (TA)n Simple_repeat Simple_repeat 2 94 0 250 318 19 19 chr10 39937411 39937565 -100379200 + L1ME2 LINE L1 5773 5926 -238 23 0 0 0 chr10 39937568 39937591 -100379174 + AT_rich Low_complexity Low_complexity 1 23 0 6894 59 27 8 chr10 39937612 39938492 -100378273 + MER11D LTR ERVK 1 897 0 356 393 12 0 chr10 39939029 39939192 -100377573 - L3 LINE CR1 -23 1554 1390 211 257 189 0 chr10 39939224 39939298 -100377467 + MIR SINE MIR 52 140 -68 213 322 104 17 chr10 39939372 39939487 -100377278 - L3 LINE CR1 -286 1291 1167 2021 106 29 0 chr10 39939545 39939818 -100376947 + AluSc SINE Alu 1 281 -28 2487 84 0 0 chr10 39939883 39940194 -100376571 - AluY SINE Alu 0 311 1 415 294 77 33 chr10 39940351 39940584 -100376181 + MIR SINE MIR 25 262 0 216 220 44 0 chr10 39941415 39941506 -100375259 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 309 262 123 57 chr10 39941507 39941665 -100375100 - MIR SINE MIR -62 200 21 551 165 0 0 chr10 39942194 39942285 -100374480 + MSTC LTR MaLR 1 91 -337 781 207 75 46 chr10 39942851 39943025 -100373740 - MER20 DNA MER1_type -25 194 16 184 258 124 41 chr10 39943152 39943249 -100373516 - MIR SINE MIR -60 202 98 182 289 105 13 chr10 39943530 39943606 -100373159 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 39943800 39943942 -100372823 + MIR SINE MIR 109 252 -10 351 222 0 0 chr10 39944702 39944774 -100371991 - L2 LINE L2 0 3272 3201 2251 93 0 0 chr10 39944809 39945099 -100371666 + AluSg1 SINE Alu 1 290 -19 26 30 0 0 chr10 39945181 39945214 -100371551 + AT_rich Low_complexity Low_complexity 1 33 0 2361 95 10 0 chr10 39945234 39945538 -100371227 - AluSq SINE Alu -6 307 1 182 371 11 0 chr10 39946578 39946667 -100370098 - MIR SINE MIR -120 142 53 183 286 41 88 chr10 39946847 39946994 -100369771 - L2 LINE L2 -73 3240 3101 317 361 13 13 chr10 39947672 39947827 -100368938 + MIR SINE MIR 98 252 -10 436 307 132 11 chr10 39948414 39948631 -100368134 - MIR SINE MIR -19 243 3 25 0 0 0 chr10 39948920 39948945 -100367820 + AT_rich Low_complexity Low_complexity 1 25 0 1356 19 0 0 chr10 39949722 39949880 -100366885 + L1PA2 LINE L1 5998 6155 0 3526 233 91 78 chr10 39949894 39951128 -100365637 - L1M4 LINE L1 -1242 4904 3686 7106 49 1 1 chr10 39951128 39952709 -100364056 - L1PA6 LINE L1 -5 6149 4570 2166 117 0 0 chr10 39952709 39952999 -100363766 - AluSg SINE Alu -11 299 10 3526 233 91 78 chr10 39952999 39953575 -100363190 - L1M4 LINE L1 -2459 3687 3071 232 352 19 0 chr10 39953578 39953683 -100363082 + MER94 DNA DNA 28 134 0 201 314 113 32 chr10 39953997 39954121 -100362644 - MIR SINE MIR -59 203 70 4324 182 23 39 chr10 39954855 39954983 -100361782 + L1MB3 LINE L1 5275 5404 -779 2591 74 14 0 chr10 39954983 39955333 -100361432 + THE1A LTR MaLR 1 355 0 11418 102 6 8 chr10 39955333 39956915 -100359850 + THE1A-int LTR MaLR 1 1580 0 2590 97 6 0 chr10 39956915 39957266 -100359499 + THE1A LTR MaLR 1 353 -2 4324 182 23 39 chr10 39957266 39958052 -100358713 + L1MB3 LINE L1 5401 6176 -7 526 302 74 10 chr10 39958295 39958497 -100358268 - MIR SINE MIR -16 246 32 274 268 70 0 chr10 39958669 39958740 -100358025 + L2 LINE L2 3238 3313 0 237 240 140 0 chr10 39960146 39960246 -100356519 + L1ME4a LINE L1 5936 6049 -72 529 312 51 58 chr10 39960545 39960837 -100355928 - L2 LINE L2 -2 3311 3022 377 257 59 6 chr10 39960856 39961016 -100355749 - L1MA10 LINE L1 -2 6332 6005 614 255 142 18 chr10 39961078 39961466 -100355299 - L1M4 LINE L1 -1211 4935 4454 2650 94 3 0 chr10 39961704 39962054 -100354711 - THE1A LTR MaLR 0 355 5 3793 102 0 11 chr10 39962329 39962871 -100353894 - L1PB1 LINE L1 -1 6150 5615 2370 149 41 1 chr10 39962875 39963605 -100353160 + L1PB1 LINE L1 4845 5597 -554 2197 287 258 14 chr10 39963605 39964936 -100351829 - L2 LINE L2 -281 3032 1375 483 316 160 40 chr10 39965124 39965899 -100350866 - L2 LINE L2 -191 3081 2220 211 331 41 16 chr10 39966548 39966669 -100350096 - MIR SINE MIR -32 230 107 205 289 0 24 chr10 39967171 39967254 -100349511 + MIR SINE MIR 155 235 -27 324 102 0 0 chr10 39967362 39967411 -100349354 + (TG)n Simple_repeat Simple_repeat 2 50 0 209 350 41 0 chr10 39967896 39967993 -100348772 - L2 LINE L2 -528 2786 2686 726 315 99 41 chr10 39968003 39968517 -100348248 + L2 LINE L2 2432 2975 -339 188 242 15 61 chr10 39968779 39968845 -100347920 - L2 LINE L2 -84 3229 3167 343 366 84 0 chr10 39969486 39969688 -100347077 - MIR SINE MIR -42 220 2 22 35 0 0 chr10 39969690 39969719 -100347046 + AT_rich Low_complexity Low_complexity 1 29 0 1647 190 28 43 chr10 39970570 39970964 -100345801 - MER89 LTR ERV1 0 559 172 204 309 128 0 chr10 39971059 39971153 -100345612 - L2 LINE L2 -262 3010 2905 932 226 26 52 chr10 39971833 39972022 -100344743 + MER58A DNA MER1_type 1 184 -2236 2244 114 0 0 chr10 39972022 39972330 -100344435 - AluSg SINE Alu -2 308 1 932 226 26 52 chr10 39972330 39972370 -100344395 + MER58A DNA MER1_type 184 224 0 210 207 52 0 chr10 39972471 39972529 -100344236 - MIR SINE MIR -102 160 100 213 391 51 7 chr10 39972820 39972958 -100343807 + MIR SINE MIR 44 187 -75 779 297 60 87 chr10 39972966 39973575 -100343190 - L2 LINE L2 -5 3308 2715 180 307 50 50 chr10 39973541 39973642 -100343123 + MIR SINE MIR 162 262 0 * 188 338 26 0 chr10 39973948 39974025 -100342740 + L2 LINE L2 2708 2786 -528 400 188 328 0 chr10 39977721 39977849 -100338916 - MER5A DNA MER1_type 0 189 20 210 150 0 0 chr10 39978364 39978404 -100338361 + (TA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 39978832 39978853 -100337912 + AT_rich Low_complexity Low_complexity 1 21 0 400 188 328 0 chr10 39980123 39980251 -100336514 - MER5A DNA MER1_type 0 189 20 435 106 0 0 chr10 39980766 39980832 -100335933 + (TA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 39981289 39981310 -100335455 + AT_rich Low_complexity Low_complexity 1 21 0 1811 91 0 0 chr10 39981721 39981953 -100334812 + AluY SINE Alu 1 232 -79 1785 168 0 23 chr10 39982048 39982351 -100334414 - AluSx SINE Alu -16 296 1 1588 184 20 3 chr10 39983916 39984220 -100332545 + AluSx SINE Alu 1 309 -3 1980 90 53 23 chr10 39984343 39984644 -100332121 - AluY SINE Alu -1 310 1 1172 92 0 0 chr10 39985606 39985758 -100331007 + AluY SINE Alu 3 154 -157 232 241 0 0 chr10 39985758 39985816 -100330949 - MER5A DNA MER1_type -123 66 9 255 79 0 0 chr10 39986069 39986107 -100330658 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 39986589 39986610 -100330155 + AT_rich Low_complexity Low_complexity 1 21 0 285 155 0 0 chr10 39987918 39987976 -100328789 + (TG)n Simple_repeat Simple_repeat 1 58 0 220 189 0 0 chr10 39991890 39991927 -100324838 + (TATG)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr10 39992352 39992373 -100324392 + AT_rich Low_complexity Low_complexity 1 21 0 1768 99 0 0 chr10 39992785 39993017 -100323748 + AluY SINE Alu 1 232 -79 1787 152 0 33 chr10 39993112 39993415 -100323350 - AluSg1 SINE Alu -16 293 1 903 182 0 6 chr10 39994981 39995146 -100321619 + AluSq SINE Alu 1 164 -149 524 146 0 0 chr10 39995239 39995321 -100321444 + AluY SINE Alu 4 85 -226 1460 118 9 26 chr10 39995421 39995649 -100321116 + AluSp SINE Alu 87 310 -3 2284 96 0 13 chr10 39995651 39995965 -100320800 + AluY SINE Alu 1 310 -1 2237 84 7 17 chr10 39995973 39996269 -100320496 + AluSg SINE Alu 5 297 -13 1130 148 14 67 chr10 39996592 39996815 -100319950 - AluSp SINE Alu -81 232 22 489 161 0 11 chr10 39996828 39996915 -100319850 + AluSp SINE Alu 54 139 -174 2258 109 3 0 chr10 39998504 39998815 -100317950 + AluSx SINE Alu 1 312 0 447 266 27 49 chr10 40000923 40001107 -100315658 - MER104 DNA Tc2 0 180 1 605 274 100 69 chr10 40001199 40001452 -100315313 - MIR SINE MIR -1 261 6 40 0 0 0 chr10 40001869 40001909 -100314856 + AT_rich Low_complexity Low_complexity 1 40 0 290 321 19 0 chr10 40002551 40002657 -100314108 + MER102b DNA MER1_type 233 340 -1 24 67 0 0 chr10 40002710 40002755 -100314010 + AT_rich Low_complexity Low_complexity 1 45 0 241 320 80 13 chr10 40003659 40003734 -100313031 - L2 LINE L2 -50 3222 3143 2031 145 3 10 chr10 40004455 40004759 -100312006 + AluSx SINE Alu 2 303 -9 208 176 0 20 chr10 40004885 40004936 -100311829 + T-rich Low_complexity Low_complexity 3 52 0 292 342 85 20 chr10 40005020 40005219 -100311546 + MIR SINE MIR 20 231 -31 642 181 0 0 chr10 40006975 40007080 -100309685 + U6 snRNA snRNA 1 105 -2 30 45 0 0 chr10 40007532 40007576 -100309189 + AT_rich Low_complexity Low_complexity 1 44 0 750 167 0 0 chr10 40007704 40007830 -100308935 - FLAM_C SINE Alu -17 126 1 215 326 103 11 chr10 40007904 40008060 -100308705 - MIR SINE MIR -41 221 58 300 70 0 0 chr10 40008533 40008576 -100308189 + (TG)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr10 40008575 40008597 -100308168 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 36 40 0 0 chr10 40008864 40008914 -100307851 + AT_rich Low_complexity Low_complexity 1 50 0 15315 61 3 5 chr10 40008986 40010942 -100305823 + L1P LINE L1 6 1957 -4189 1998 219 32 7 chr10 40010999 40011441 -100305324 - LTR22 LTR ERVK -56 453 1 216 0 0 0 chr10 40011466 40011490 -100305275 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 261 211 0 18 chr10 40011490 40011542 -100305223 - FLAM SINE Alu -16 117 67 1663 209 55 60 chr10 40011593 40012029 -100304736 - Tigger2a DNA MER2_type 0 434 1 1809 155 19 23 chr10 40013037 40013346 -100303419 + AluSx SINE Alu 3 310 -2 1914 145 16 16 chr10 40014318 40014628 -100302137 - AluSg SINE Alu 0 310 1 546 294 98 20 chr10 40014632 40014887 -100301878 - MLT1L LTR MaLR -221 394 120 939 265 5 5 chr10 40015067 40015120 -100301645 - MER58A DNA MER1_type -2196 224 172 2110 139 0 0 chr10 40015120 40015415 -100301350 + AluSg SINE Alu 2 296 -14 939 265 5 5 chr10 40015415 40015584 -100301181 - MER58A DNA MER1_type -2247 173 2 29 90 0 0 chr10 40016488 40016566 -100300199 + AT_rich Low_complexity Low_complexity 1 78 0 2026 104 3 77 chr10 40016939 40017266 -100299499 + AluSx SINE Alu 1 303 -9 3016 119 6 53 chr10 40018228 40018741 -100298024 - LTR22B LTR ERVK -3 489 1 259 258 16 0 chr10 40019886 40019948 -100296817 - MER5A DNA MER1_type -118 71 9 30 0 0 0 chr10 40020206 40020236 -100296529 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr10 40021762 40021788 -100294977 + AT_rich Low_complexity Low_complexity 1 26 0 252 158 0 0 chr10 40022059 40022116 -100294649 + (TG)n Simple_repeat Simple_repeat 2 58 0 420 216 302 0 chr10 40026022 40026161 -100290604 - MER5A DNA MER1_type 0 189 9 213 94 0 0 chr10 40026657 40026689 -100290076 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2171 99 7 0 chr10 40027546 40027840 -100288925 + AluY SINE Alu 1 296 -15 22 35 0 0 chr10 40028107 40028136 -100288629 + AT_rich Low_complexity Low_complexity 1 29 0 1599 168 0 25 chr10 40029139 40029419 -100287346 - AluSx SINE Alu -39 273 1 1544 196 20 7 chr10 40030981 40031287 -100285478 + AluSx SINE Alu 1 310 -2 2038 80 53 17 chr10 40031445 40031745 -100285020 - AluY SINE Alu 0 311 1 233 319 32 0 chr10 40032077 40032171 -100284594 - Charlie1 DNA MER1_type -2563 198 102 22 0 0 0 chr10 40032355 40032377 -100284388 + AT_rich Low_complexity Low_complexity 1 22 0 1102 105 0 7 chr10 40032720 40032873 -100283892 + AluY SINE Alu 3 154 -157 310 190 0 0 chr10 40032873 40032931 -100283834 - MER5A DNA MER1_type -123 66 9 29 0 0 0 chr10 40033201 40033230 -100283535 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 40033729 40033750 -100283015 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 40034761 40034789 -100281976 + AT_rich Low_complexity Low_complexity 1 28 0 285 155 0 0 chr10 40035062 40035120 -100281645 + (TG)n Simple_repeat Simple_repeat 1 58 0 1896 90 57 23 chr10 40035494 40035794 -100280971 - AluY SINE Alu -1 310 1 233 319 32 0 chr10 40036126 40036220 -100280545 - Charlie1 DNA MER1_type -2563 198 102 1081 105 0 0 chr10 40036766 40036918 -100279847 + AluY SINE Alu 3 154 -157 253 224 0 0 chr10 40036918 40036976 -100279789 - MER5A DNA MER1_type -123 66 9 31 26 0 0 chr10 40037224 40037262 -100279503 + AT_rich Low_complexity Low_complexity 1 38 0 285 155 0 0 chr10 40039096 40039154 -100277611 + (TG)n Simple_repeat Simple_repeat 1 58 0 337 233 0 0 chr10 40043145 40043218 -100273547 - MER5A DNA MER1_type -108 81 9 19783 60 16 2 chr10 40043377 40046627 -100270138 + L1PA6 LINE L1 2729 6018 -136 6815 60 8 0 chr10 40046727 40048421 -100268344 + L1PA6 LINE L1 4419 6154 0 321 267 139 0 chr10 40048613 40048699 -100268066 - MER5A DNA MER1_type -83 106 9 2156 111 0 16 chr10 40049317 40049632 -100267133 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr10 40050432 40050465 -100266300 + AT_rich Low_complexity Low_complexity 1 33 0 738 323 8 23 chr10 40051100 40051357 -100265408 + L1PA15-16 LINE L1 1309 1561 -5288 511 316 31 18 chr10 40051354 40051579 -100265186 + L1PA15-16 LINE L1 1350 1577 -5273 * 587 199 37 27 chr10 40051702 40051920 -100264845 - L1MC1 LINE L1 -343 6059 5796 * 657 249 77 30 chr10 40051918 40052030 -100264735 - L1MC1 LINE L1 -2402 3813 3708 2086 201 34 0 chr10 40052030 40052444 -100264321 - MSTA LTR MaLR 0 428 1 657 249 77 30 chr10 40052444 40052628 -100264137 - L1MC1 LINE L1 -2507 3708 3503 6737 70 5 0 chr10 40052777 40053937 -100262828 - L1PA7 LINE L1 -3 6151 4992 7027 30 10 0 chr10 40053952 40054786 -100261979 - L1PA4 LINE L1 -2 6153 5312 5981 42 1 1 chr10 40054787 40055524 -100261241 + L1P LINE L1 4099 4835 -1311 1102 106 6 0 chr10 40055521 40055681 -100261084 - L1PA7 LINE L1 -1139 5007 4847 * 443 321 68 16 chr10 40055681 40055930 -100260835 - L1MC1 LINE L1 -2724 3491 3230 1387 246 20 14 chr10 40055947 40056305 -100260460 - MLT1A1 LTR MaLR 0 365 6 933 265 43 55 chr10 40056311 40056733 -100260032 - L1MC1 LINE L1 -3009 3206 2790 1284 227 40 99 chr10 40056749 40057351 -100259414 - L1MC1 LINE L1 -3524 2691 2193 213 39 0 0 chr10 40057351 40057377 -100259388 + (TA)n Simple_repeat Simple_repeat 1 26 0 1284 227 40 99 chr10 40057377 40057613 -100259152 - L1MC1 LINE L1 -4022 2193 1944 309 268 35 63 chr10 40057763 40057905 -100258860 - L1MC1 LINE L1 -5265 1131 994 1081 346 73 24 chr10 40057909 40058582 -100258183 - L1MC1 LINE L1 -5651 745 40 338 422 64 15 chr10 40058590 40058917 -100257848 + L2 LINE L2 2930 3272 0 23 33 0 0 chr10 40059852 40059882 -100256883 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 40060019 40060043 -100256722 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr10 40061290 40061329 -100255436 + AT_rich Low_complexity Low_complexity 1 39 0 425 50 17 0 chr10 40062797 40062857 -100253908 + (TA)n Simple_repeat Simple_repeat 1 61 0 280 369 62 23 chr10 40063580 40063756 -100253009 - L2 LINE L2 -410 2904 2722 2412 192 21 29 chr10 40064893 40065414 -100251351 - L1MB8 LINE L1 -9 6169 5653 252 215 154 0 chr10 40065929 40065994 -100250771 - Tigger4(Zombi) DNA MER2_type -2654 77 3 340 224 0 0 chr10 40066007 40066065 -100250700 - Tigger5 DNA MER2_type -6 2317 2260 23 33 0 0 chr10 40066599 40066629 -100250136 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr10 40066742 40066804 -100249961 + AT_rich Low_complexity Low_complexity 1 62 0 320 127 25 76 chr10 40067186 40067265 -100249500 + MER34C LTR ERV1 423 497 -88 218 105 26 0 chr10 40067285 40067323 -100249442 + (TA)n Simple_repeat Simple_repeat 1 39 0 28 48 0 0 chr10 40067933 40067975 -100248790 + AT_rich Low_complexity Low_complexity 1 42 0 1080 239 71 14 chr10 40068607 40068904 -100247861 - L1MB8 LINE L1 -5 6173 5860 24 0 0 0 chr10 40068904 40068928 -100247837 + AT_rich Low_complexity Low_complexity 1 24 0 2538 17 0 7 chr10 40068928 40069226 -100247539 - L1PA5 LINE L1 -13 6141 5846 433 17 172 0 chr10 40069224 40069282 -100247483 + L1P LINE L1 2189 2256 -3890 * 2637 200 74 10 chr10 40069287 40070319 -100246446 - L1MB8 LINE L1 -304 5874 4771 726 300 95 5 chr10 40071678 40071937 -100244828 - MLT1G1 LTR MaLR -11 584 217 281 163 0 0 chr10 40072087 40072130 -100244635 - MLT1G1 LTR MaLR -441 126 84 1149 171 27 35 chr10 40072164 40072421 -100244344 - L1MA5 LINE L1 -3 6297 6043 1025 95 23 95 chr10 40072593 40072814 -100243951 - L1MA3 LINE L1 -1 6304 6100 299 186 0 0 chr10 40073961 40074020 -100242745 - L1MA9 LINE L1 -37 6275 6217 363 23 0 0 chr10 40075463 40075507 -100241258 + (TA)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 40075506 40075527 -100241238 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 760 178 53 20 chr10 40075573 40075725 -100241040 + FAM SINE Alu 1 48 -1 32 26 0 0 chr10 40077112 40077151 -100239614 + AT_rich Low_complexity Low_complexity 1 39 0 220 309 0 0 chr10 40077301 40077356 -100239409 + L2 LINE L2 3211 3265 -7 2462 72 3 0 chr10 40078569 40078876 -100237889 - AluY SINE Alu -3 308 1 258 333 44 0 chr10 40079997 40080111 -100236654 + MIR3 SINE MIR 38 156 -52 1003 47 0 0 chr10 40081146 40081274 -100235491 - L1PA4 LINE L1 -3 6152 6025 40 21 0 0 chr10 40084090 40084137 -100232628 + AT_rich Low_complexity Low_complexity 1 47 0 27 87 0 0 chr10 40084156 40084225 -100232540 + AT_rich Low_complexity Low_complexity 1 69 0 1215 261 91 7 chr10 40084691 40085372 -100231393 - L1MC4 LINE L1 -140 7902 7012 2185 221 108 13 chr10 40085400 40085943 -100230822 - Tigger2 DNA MER2_type -2029 689 76 2447 39 0 32 chr10 40085943 40086251 -100230514 - AluY SINE Alu -12 299 2 2185 221 108 13 chr10 40086251 40086336 -100230429 - Tigger2 DNA MER2_type -2642 76 1 2611 194 20 17 chr10 40086390 40086978 -100229787 - MER6A DNA MER2_type -1 604 275 893 247 92 4 chr10 40087086 40087325 -100229440 - MER6A DNA MER2_type -344 261 2 590 265 131 39 chr10 40087907 40088296 -100228469 - L1M4 LINE L1 -1645 4501 4077 1161 275 32 47 chr10 40088380 40088885 -100227880 - MLT1E LTR MaLR 0 593 102 253 273 62 55 chr10 40088979 40089235 -100227530 - L1M4 LINE L1 -2160 3986 3729 552 202 75 87 chr10 40089550 40089723 -100227042 - MER20 DNA MER1_type -1 218 48 481 179 0 0 chr10 40089749 40089827 -100226938 + AluS SINE Alu 3 80 -232 1057 143 61 15 chr10 40089841 40090090 -100226675 - LTR54 LTR ERV1 0 510 219 1250 104 14 45 chr10 40090313 40090398 -100226367 + L1PA13 LINE L1 5951 6037 -126 2448 57 0 35 chr10 40090398 40090714 -100226051 + AluY SINE Alu 1 305 -6 1250 104 14 45 chr10 40090714 40090848 -100225917 + L1PA13 LINE L1 6037 6163 0 289 305 61 49 chr10 40093039 40093203 -100223562 - L2 LINE L2 -203 3069 2904 1710 206 19 19 chr10 40093328 40093693 -100223072 + MLT1A1 LTR MaLR 1 365 0 529 235 90 12 chr10 40095502 40095668 -100221097 + MIR SINE MIR 74 252 -10 681 177 89 0 chr10 40096014 40096138 -100220627 + MER3 DNA MER1_type 3 137 -72 3211 195 25 68 chr10 40096138 40096447 -100220318 - L1MB7 LINE L1 -10 6174 5853 2313 97 3 10 chr10 40096447 40096758 -100220007 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40096758 40097482 -100219283 - L1MB7 LINE L1 -331 5853 5099 2404 94 3 0 chr10 40097482 40097790 -100218975 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40097790 40097967 -100218798 - L1MB7 LINE L1 -1085 5099 5025 1356 181 34 4 chr10 40097967 40098233 -100218532 + L1PB4 LINE L1 5883 6156 0 3211 195 25 68 chr10 40098233 40098259 -100218506 - L1MB7 LINE L1 -1159 5025 4999 990 160 15 15 chr10 40098272 40098472 -100218293 - L1MB4 LINE L1 -2 6178 5979 315 233 0 0 chr10 40098484 40098557 -100218208 + MER3 DNA MER1_type 137 209 0 492 314 117 21 chr10 40098643 40099065 -100217700 + L2 LINE L2 2661 3128 -185 1072 162 23 6 chr10 40099074 40099247 -100217518 - AluJo SINE Alu -21 291 116 264 330 188 0 chr10 40099298 40099410 -100217355 + L2 LINE L2 3180 3312 -1 5877 118 2 6 chr10 40099562 40100551 -100216214 - L1P LINE L1 -2354 3792 2808 2860 76 0 8 chr10 40100569 40100950 -100215815 + L1PA8 LINE L1 5788 6165 -7 1351 251 62 44 chr10 40100974 40101490 -100215275 + L1ME3A LINE L1 4507 5044 -1111 2296 109 0 0 chr10 40101490 40101794 -100214971 + AluY SINE Alu 1 304 -7 1351 251 62 44 chr10 40101794 40102055 -100214710 + L1ME3A LINE L1 5044 5299 -856 1930 251 100 14 chr10 40102092 40102741 -100214024 + L1ME3A LINE L1 5408 6112 -58 312 243 59 22 chr10 40102804 40102940 -100213825 + L1MC5 LINE L1 7785 7925 -36 1412 149 43 0 chr10 40103609 40103864 -100212901 + L1PA16 LINE L1 5896 6161 -5 252 288 120 39 chr10 40105591 40105924 -100210841 - L1ME4a LINE L1 -31 6090 5731 3417 131 0 42 chr10 40106066 40106615 -100210150 - MER1A DNA MER1_type -1 526 1 563 261 0 50 chr10 40106618 40106798 -100209967 - L2 LINE L2 -684 2630 2460 239 260 30 80 chr10 40108044 40108144 -100208621 - MIR3 SINE MIR 0 208 114 274 325 130 15 chr10 40108194 40108575 -100208190 + MER115 DNA AcHobo 6 443 -250 244 108 0 0 chr10 40109386 40109423 -100207342 - tRNA-Met-i tRNA tRNA -38 37 1 2119 125 3 3 chr10 40109433 40109736 -100207029 - AluSx SINE Alu -3 309 7 2009 142 17 0 chr10 40109771 40110067 -100206698 - AluSq SINE Alu -12 301 1 2145 129 0 0 chr10 40110240 40110534 -100206231 - AluSq SINE Alu -19 294 1 215 274 150 43 chr10 40111285 40111458 -100205307 + MIR SINE MIR 38 225 -37 317 271 77 50 chr10 40111580 40111665 -100205100 + MER5A DNA MER1_type 4 85 -104 318 26 0 0 chr10 40111665 40111704 -100205061 + (TC)n Simple_repeat Simple_repeat 2 40 0 477 0 0 0 chr10 40111705 40111758 -100205007 + (CA)n Simple_repeat Simple_repeat 2 54 0 317 271 77 50 chr10 40111758 40111851 -100204914 + MER5A DNA MER1_type 84 189 0 181 172 0 0 chr10 40113864 40113893 -100202872 - MIR SINE MIR -14 248 220 13866 104 3 3 chr10 40114342 40116788 -100199977 - L1P3 LINE L1 -532 5622 3178 3444 43 0 0 chr10 40116783 40117227 -100199538 - L1P2 LINE L1 -378 5776 5333 * 4707 115 47 76 chr10 40117227 40118073 -100198692 - LTR12 LTR ERV1 0 826 5 7953 123 14 14 chr10 40118079 40119852 -100196913 - HERV9 LTR ERV1 0 8399 504 942 196 45 11 chr10 40121118 40121297 -100195468 + AluJo SINE Alu 121 305 -7 2045 136 3 0 chr10 40121910 40122204 -100194561 + AluSx SINE Alu 1 295 -17 1811 171 0 0 chr10 40123542 40123869 -100192896 - AluY SINE Alu 0 327 1 1704 124 4 19 chr10 40124837 40125103 -100191662 + AluY SINE Alu 1 262 -49 3361 74 11 0 chr10 40125233 40125666 -100191099 - HERV9 LTR ERV1 -1544 6855 6418 39644 102 28 27 chr10 40125666 40133509 -100183256 - HERV9 LTR ERV1 0 2438 17 4303 45 2 1 chr10 40133512 40134055 -100182710 - L1P LINE L1 -804 5347 4807 * 14278 158 97 27 chr10 40134053 40137020 -100179745 - L1P LINE L1 -2962 3184 12 233 338 88 7 chr10 40137302 40137450 -100179315 + MLT1K LTR MaLR 17 176 -412 2412 157 105 10 chr10 40137634 40138043 -100178722 + MER83 LTR ERV1 1 448 0 567 231 90 63 chr10 40138098 40138353 -100178412 + L1ME3A LINE L1 5904 6165 -5 21 0 0 0 chr10 40139665 40139686 -100177079 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 40140443 40140464 -100176301 + AT_rich Low_complexity Low_complexity 1 21 0 2288 105 0 0 chr10 40140775 40141070 -100175695 - AluSg SINE Alu -15 295 1 270 56 0 0 chr10 40142189 40142225 -100174540 + (TC)n Simple_repeat Simple_repeat 2 37 0 252 0 0 0 chr10 40142225 40142253 -100174512 + (CA)n Simple_repeat Simple_repeat 1 28 0 395 326 126 49 chr10 40143089 40143498 -100173267 - L2 LINE L2 -377 2937 2476 2507 210 58 67 chr10 40143498 40144227 -100172538 - MER72 LTR ERV1 0 722 1 395 326 126 49 chr10 40144227 40144347 -100172418 - L2 LINE L2 -838 2476 2367 546 206 31 0 chr10 40144587 40144684 -100172081 + Tigger3(Golem) DNA MER2_type 2928 3027 -2 1352 194 4 16 chr10 40145244 40145502 -100171263 + 7SLRNA srpRNA srpRNA 54 308 -12 22 0 0 0 chr10 40145502 40145524 -100171241 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr10 40145524 40145564 -100171201 + (TG)n Simple_repeat Simple_repeat 1 40 0 431 257 184 7 chr10 40145581 40145733 -100171032 + MIR SINE MIR 25 203 -59 210 143 0 0 chr10 40146368 40146403 -100170362 + (GA)n Simple_repeat Simple_repeat 2 36 0 369 317 67 12 chr10 40146784 40146948 -100169817 - MIR SINE MIR -88 174 2 509 278 168 0 chr10 40148799 40148972 -100167793 - MIR SINE MIR -22 240 39 1276 203 63 40 chr10 40148979 40149328 -100167437 + MLT1A2 LTR MaLR 1 357 -17 585 158 20 0 chr10 40150804 40150905 -100165860 - HY1 scRNA scRNA 0 112 10 2410 251 40 15 chr10 40151040 40151716 -100165049 + L1ME2 LINE L1 5456 6148 -16 1295 179 22 93 chr10 40152460 40152772 -100163993 - AluJo SINE Alu -12 290 1 618 133 47 0 chr10 40153538 40153666 -100163099 + GA-rich Low_complexity Low_complexity 3 136 0 287 87 22 0 chr10 40154251 40154297 -100162468 - L1MA4A LINE L1 -6 6297 6251 396 286 92 5 chr10 40155064 40155270 -100161495 - L1ME LINE L1 -304 5817 5594 916 196 45 11 chr10 40157184 40157363 -100159402 + AluJo SINE Alu 121 305 -7 2024 139 3 0 chr10 40157976 40158270 -100158495 + AluSx SINE Alu 1 295 -17 1745 171 0 4 chr10 40159607 40159934 -100156831 - AluSg SINE Alu 0 326 1 252 0 0 0 chr10 40160101 40160129 -100156636 + (T)n Simple_repeat Simple_repeat 1 28 0 2055 147 0 3 chr10 40160671 40160984 -100155781 - AluSx SINE Alu 0 312 1 4994 62 9 0 chr10 40163931 40164513 -100152252 - LTR14C LTR ERVK 0 587 1 1482 205 27 104 chr10 40165796 40166323 -100150442 - MLT1E2 LTR MaLR -137 489 4 256 275 81 38 chr10 40166347 40166558 -100150207 - L1MEd LINE L1 -5219 900 681 354 304 30 30 chr10 40166599 40166767 -100149998 - L1MEd LINE L1 -5554 565 398 272 224 13 66 chr10 40166832 40166908 -100149857 - L1MEd LINE L1 -5744 375 304 256 268 14 0 chr10 40167079 40167150 -100149615 - L1MEd LINE L1 -6046 73 2 211 226 148 61 chr10 40167196 40167311 -100149454 + L2 LINE L2 1891 2015 -1299 1980 153 41 25 chr10 40167367 40167734 -100149031 - L1PA13 LINE L1 0 6163 5791 2147 111 3 33 chr10 40167975 40168282 -100148483 - AluSp SINE Alu -14 299 2 1953 145 0 0 chr10 40168283 40168565 -100148200 - AluSq SINE Alu -31 282 1 1603 228 58 90 chr10 40168579 40169211 -100147554 + LTR9 LTR ERV1 1 612 0 18761 175 41 29 chr10 40169211 40170636 -100146129 + HUERS-P3 LTR ERV1 1 1408 -7511 2259 106 3 0 chr10 40170636 40170939 -100145826 + AluY SINE Alu 1 304 -7 18761 175 41 29 chr10 40170939 40172803 -100143962 + HUERS-P3 LTR ERV1 1408 3338 -5581 2167 17 0 0 chr10 40172803 40173039 -100143726 - AluYb8 SINE Alu -11 307 72 18761 175 41 29 chr10 40173039 40173315 -100143450 + HUERS-P3 LTR ERV1 3338 3609 -5310 1153 199 32 0 chr10 40173315 40173531 -100143234 + HUERS-P3 LTR ERV1 6016 6238 -2681 974 282 72 9 chr10 40173531 40173850 -100142915 + LTR19C LTR ERV1 441 779 0 258 309 79 29 chr10 40173855 40173994 -100142771 + L2 LINE L2 2702 2847 -467 236 256 0 39 chr10 40174015 40174093 -100142672 - LTR67 LTR ERVL 0 557 483 3875 110 4 4 chr10 40174548 40175059 -100141706 + MER9 LTR ERVK 1 511 0 28 0 0 0 chr10 40175274 40175302 -100141463 + AT_rich Low_complexity Low_complexity 1 28 0 1057 188 43 13 chr10 40175412 40175646 -100141119 - L1PB2 LINE L1 -4284 2579 2339 * 8762 204 14 54 chr10 40175634 40178345 -100138420 + L1PB2 LINE L1 2573 5247 -1615 1507 173 34 43 chr10 40178345 40178669 -100138096 + THE1C LTR MaLR 1 321 -54 686 43 75 0 chr10 40178675 40178869 -100137896 + (TA)n Simple_repeat Simple_repeat 1 208 0 28 0 0 0 chr10 40178879 40178907 -100137858 + AT_rich Low_complexity Low_complexity 1 28 0 253 220 20 0 chr10 40178915 40178965 -100137800 + THE1C LTR MaLR 305 355 0 3983 191 33 16 chr10 40178979 40180391 -100136374 + L1PB2 LINE L1 5258 6694 -173 695 138 76 0 chr10 40180399 40180544 -100136221 + L1PB2 LINE L1 5254 5409 -742 823 116 77 7 chr10 40180547 40180702 -100136063 + L1PB2 LINE L1 5984 6149 -2 29 0 0 0 chr10 40180702 40180731 -100136034 + AT_rich Low_complexity Low_complexity 1 29 0 3625 186 41 11 chr10 40181194 40181997 -100134768 - L1MA4A LINE L1 -1 7004 6178 4058 17 0 2 chr10 40182002 40182469 -100134296 - L1PA3 LINE L1 -7 6148 5683 7430 218 85 23 chr10 40182470 40183552 -100133213 - L1MA4A LINE L1 -744 6104 5091 1991 143 10 3 chr10 40183552 40183859 -100132906 - AluSx SINE Alu -3 309 1 7430 218 85 23 chr10 40183859 40185167 -100131598 - L1MA4A LINE L1 -1757 5091 3632 274 30 0 0 chr10 40185190 40185223 -100131542 + L1PA6 LINE L1 5895 5927 -227 27 0 0 0 chr10 40187496 40187523 -100129242 + AT_rich Low_complexity Low_complexity 1 27 0 1914 236 50 43 chr10 40187694 40187857 -100128908 - L1MA4A LINE L1 -3258 3590 3430 2074 96 0 0 chr10 40187857 40188173 -100128592 - AluY SINE Alu 0 318 3 1914 236 50 43 chr10 40188173 40188993 -100127772 - L1MA4A LINE L1 -3418 3430 2602 3750 230 45 20 chr10 40189003 40190801 -100125964 - L1M2 LINE L1 -3226 3623 1776 587 204 14 14 chr10 40190802 40190949 -100125816 + L1MA10 LINE L1 6184 6330 -4 1925 254 60 21 chr10 40190953 40191468 -100125297 + MLT1H1 LTR MaLR 19 553 -2 3076 302 31 37 chr10 40191651 40191736 -100125029 - L1M2 LINE L1 -5036 1814 1730 2279 77 0 13 chr10 40191736 40192035 -100124730 + AluY SINE Alu 2 296 -15 3076 302 31 37 chr10 40192035 40193094 -100123671 - L1M2 LINE L1 -5120 1730 677 1307 291 61 104 chr10 40193195 40193869 -100122896 - L1M2 LINE L1 -6200 649 5 475 252 147 28 chr10 40193870 40194088 -100122677 - L1M4 LINE L1 -1828 4318 4075 2878 82 14 5 chr10 40194130 40194544 -100122221 - L1PA6 LINE L1 -11 6143 5726 428 286 5 70 chr10 40195667 40195852 -100120913 + MLT1D LTR MaLR 3 175 -330 23 0 0 0 chr10 40196177 40196200 -100120565 + AT_rich Low_complexity Low_complexity 1 23 0 300 277 135 0 chr10 40197853 40198001 -100118764 - L1MEc LINE L1 -4916 1480 1313 1845 92 46 11 chr10 40198034 40198295 -100118470 - AluY SINE Alu -7 304 35 2314 94 0 0 chr10 40198297 40198606 -100118159 - AluY SINE Alu -2 309 1 23 0 0 0 chr10 40198617 40198640 -100118125 + AT_rich Low_complexity Low_complexity 1 23 0 664 163 36 48 chr10 40200025 40200191 -100116574 + L1MA7 LINE L1 5980 6143 -148 * 2502 198 64 29 chr10 40200189 40200780 -100115985 - L1MA4A LINE L1 -11 6292 5681 8891 222 35 19 chr10 40200788 40201296 -100115469 - L1MA4A LINE L1 -1474 4672 4174 5420 149 25 39 chr10 40201296 40202381 -100114384 + MER11C LTR ERVK 2 1071 0 8891 222 35 19 chr10 40202381 40204228 -100112537 - L1MA4A LINE L1 -1972 4174 2279 23 33 0 0 chr10 40204466 40204496 -100112269 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 40205223 40205259 -100111506 + AT_rich Low_complexity Low_complexity 1 36 0 1845 137 0 17 chr10 40205494 40205793 -100110972 - AluSq SINE Alu -14 299 6 1129 283 67 40 chr10 40205860 40206702 -100110063 + L1MB7 LINE L1 3396 4259 -1887 23 54 0 0 chr10 40206749 40206786 -100109979 + AT_rich Low_complexity Low_complexity 1 37 0 1291 301 72 17 chr10 40206786 40208244 -100108521 + L1MB7 LINE L1 4472 6174 -10 1781 220 64 10 chr10 40208374 40208779 -100107986 - L1PA16 LINE L1 -73 6093 5667 23 0 0 0 chr10 40208779 40208802 -100107963 + AT_rich Low_complexity Low_complexity 1 23 0 5062 190 42 20 chr10 40208811 40208846 -100107919 - L1PA16 LINE L1 -638 5528 5495 228 35 0 0 chr10 40208846 40208875 -100107890 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5062 190 42 20 chr10 40208875 40210255 -100106510 - L1PA16 LINE L1 -671 5495 4089 288 111 0 0 chr10 40210431 40210476 -100106289 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2405 184 39 19 chr10 40210482 40211015 -100105750 - L1MA6 LINE L1 -6 6294 5751 406 224 0 5 chr10 40211015 40211119 -100105646 - L1M4 LINE L1 -503 6373 6273 * 5177 254 43 36 chr10 40211115 40211464 -100105301 - L1M4 LINE L1 -892 5956 5611 2079 101 0 32 chr10 40211464 40211772 -100104993 + AluY SINE Alu 1 298 -13 5177 254 43 36 chr10 40211772 40212810 -100103955 - L1M4 LINE L1 -1237 5611 4582 2159 96 0 33 chr10 40212810 40213111 -100103654 - AluY SINE Alu -20 291 1 5177 254 43 36 chr10 40213111 40213481 -100103284 - L1M4 LINE L1 -2266 4582 4180 2225 92 0 3 chr10 40213481 40213774 -100102991 - AluY SINE Alu -19 292 1 5177 254 43 36 chr10 40213774 40213990 -100102775 - L1M4 LINE L1 -2668 4180 3967 1586 187 45 15 chr10 40214410 40214742 -100102023 + MER2 DNA MER2_type 2 343 -1 31 68 0 0 chr10 40215470 40215529 -100101236 + AT_rich Low_complexity Low_complexity 1 59 0 250 319 29 58 chr10 40215559 40215697 -100101068 - LTR45 LTR ERV1 0 525 392 9301 215 68 29 chr10 40216039 40217953 -100098812 - L1MA4A LINE L1 -1 7004 5166 2073 133 0 13 chr10 40217953 40218269 -100098496 - AluSx SINE Alu 0 312 1 9301 215 68 29 chr10 40218269 40219763 -100097002 - L1MA4A LINE L1 -1839 5166 3390 2126 119 3 0 chr10 40219763 40220058 -100096707 - AluY SINE Alu -15 296 1 9301 215 68 29 chr10 40220058 40220880 -100095885 - L1MA4A LINE L1 -3615 3390 2602 2706 236 45 7 chr10 40220890 40221799 -100094966 - L1M4 LINE L1 -3226 3622 2677 271 371 45 0 chr10 40222165 40222297 -100094468 - MIR SINE MIR -20 242 105 559 284 65 12 chr10 40223428 40223597 -100093168 + MIR SINE MIR 30 207 -55 186 298 40 89 chr10 40224194 40224387 -100092378 + MIR SINE MIR 17 199 -63 203 316 0 0 chr10 40224496 40224575 -100092190 + (CCTA)n Simple_repeat Simple_repeat 4 82 0 345 340 57 21 chr10 40225618 40225812 -100090953 - MIR SINE MIR -1 261 61 521 227 58 67 chr10 40226015 40226162 -100090603 - MER112 DNA MER1_type -33 227 81 584 203 45 40 chr10 40226162 40226339 -100090426 - MER104 DNA MER2_type 0 180 3 521 227 58 67 chr10 40226339 40226416 -100090349 - MER112 DNA MER1_type -179 81 5 297 247 14 14 chr10 40226943 40227016 -100089749 - L2 LINE L2 0 3313 3241 218 338 0 0 chr10 40227564 40227635 -100089130 - MIR SINE MIR -75 187 117 446 273 23 8 chr10 40227903 40228031 -100088734 + MIR3 SINE MIR 13 142 -66 186 43 0 0 chr10 40228117 40228140 -100088625 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2052 82 52 28 chr10 40228855 40229146 -100087619 + AluSx SINE Alu 1 298 -14 206 75 0 50 chr10 40229916 40229956 -100086809 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2889 223 47 17 chr10 40230439 40231331 -100085434 - L1M4 LINE L1 -4160 2689 1771 532 186 16 8 chr10 40231332 40231461 -100085304 + L1MA10 LINE L1 6187 6316 -18 1538 273 54 39 chr10 40231468 40231621 -100085144 + MLT1H1 LTR MaLR 12 161 -394 2338 91 0 26 chr10 40231621 40231929 -100084836 + AluY SINE Alu 1 300 -11 1538 273 54 39 chr10 40231929 40232309 -100084456 + MLT1H1 LTR MaLR 161 553 -2 254 244 67 22 chr10 40232311 40232401 -100084364 + MLT1H1-int LTR MaLR 1 94 -1277 2922 307 29 23 chr10 40232511 40233623 -100083142 - L1M4 LINE L1 -5056 1793 676 1222 330 16 2 chr10 40233935 40234384 -100082381 - L1M4 LINE L1 -6385 464 10 775 280 102 34 chr10 40234392 40234870 -100081895 - L1M4 LINE L1 -1834 4312 3802 26 74 0 0 chr10 40235874 40235928 -100080837 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr10 40236147 40236175 -100080590 + AT_rich Low_complexity Low_complexity 1 28 0 1034 183 5 0 chr10 40236257 40236459 -100080306 - L1MC/D LINE L1 -795 5549 5347 189 0 0 0 chr10 40236606 40236627 -100080138 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 820 139 0 0 chr10 40236747 40236869 -100079896 + AluSp/q SINE Alu 169 290 -23 579 171 0 140 chr10 40236881 40236967 -100079798 - MER47A DNA MER2_type -2154 169 115 1906 164 13 0 chr10 40236967 40237265 -100079500 - AluJb SINE Alu -2 310 9 579 171 0 140 chr10 40237265 40237342 -100079423 - MER47A DNA MER2_type -2208 115 29 1181 132 61 14 chr10 40237380 40237593 -100079172 - AluSc SINE Alu -82 227 5 417 232 9 89 chr10 40237597 40237821 -100078944 - L1MC/D LINE L1 -850 5296 5091 1623 176 10 43 chr10 40238612 40238913 -100077852 - AluJo SINE Alu -21 291 1 188 273 80 57 chr10 40239319 40239407 -100077358 + L2 LINE L2 3224 3313 0 312 102 0 0 chr10 40241983 40242032 -100074733 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1516 176 40 29 chr10 40242057 40242330 -100074435 - AluJb SINE Alu -36 276 1 894 234 46 0 chr10 40242464 40242661 -100074104 + MIR SINE MIR 3 208 -54 189 0 0 0 chr10 40243498 40243519 -100073246 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 535 197 16 33 chr10 40243841 40243963 -100072802 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 40244917 40244938 -100071827 + AT_rich Low_complexity Low_complexity 1 21 0 215 214 24 0 chr10 40245069 40245111 -100071654 + CT-rich Low_complexity Low_complexity 5 47 0 1997 108 7 44 chr10 40245176 40245503 -100071262 - AluSx SINE Alu 0 316 1 711 224 29 35 chr10 40245898 40246072 -100070693 + MER5B DNA MER1_type 1 173 -5 367 309 22 29 chr10 40246087 40246223 -100070542 - MER5A DNA MER1_type 0 189 55 353 386 39 30 chr10 40246506 40246869 -100069896 - L2 LINE L2 -1907 1407 1042 2843 138 9 0 chr10 40247241 40247684 -100069081 - L1PA16 LINE L1 -9 6157 5711 47 44 0 0 chr10 40248258 40248326 -100068439 + AT_rich Low_complexity Low_complexity 1 68 0 2146 91 3 56 chr10 40248354 40248673 -100068092 + AluSq SINE Alu 9 310 -3 206 333 123 18 chr10 40248916 40249030 -100067735 + L2 LINE L2 3142 3267 -5 500 107 39 10 chr10 40250448 40250551 -100066214 + CT-rich Low_complexity Low_complexity 3 108 0 1095 93 0 27 chr10 40250551 40250734 -100066031 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 217 313 102 39 chr10 40250936 40251064 -100065701 - L2 LINE L2 -18 3295 3160 2055 117 10 10 chr10 40252905 40253204 -100063561 - AluSg SINE Alu -11 299 1 566 259 12 57 chr10 40253511 40253758 -100063007 + MER106A DNA MER1_type 1 236 0 8216 163 102 70 chr10 40254920 40255672 -100061093 + L1MC1 LINE L1 7 733 -5693 10771 64 7 0 chr10 40255672 40257842 -100058923 + L1PA6 LINE L1 3961 6143 -11 8216 163 102 70 chr10 40257842 40257880 -100058885 + L1MC1 LINE L1 733 768 -5658 1525 206 0 24 chr10 40257880 40258167 -100058598 - AluJo SINE Alu -32 280 1 8216 163 102 70 chr10 40258167 40259716 -100057049 + L1MC1 LINE L1 768 2422 -4004 1039 208 34 47 chr10 40259712 40260092 -100056673 + L1MC1 LINE L1 3123 3497 -2929 * 5137 202 51 20 chr10 40260096 40261137 -100055628 + L1MC1 LINE L1 3917 4923 -1690 6576 117 26 18 chr10 40261137 40262199 -100054566 - MER11C LTR ERVK 0 1071 1 5137 202 51 20 chr10 40262199 40263756 -100053009 + L1MC1 LINE L1 4923 6606 -7 1507 194 51 3 chr10 40263759 40264052 -100052713 + AluJo SINE Alu 1 307 -5 198 118 0 0 chr10 40264075 40264109 -100052656 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 290 221 29 0 chr10 40264163 40264231 -100052534 + L1ME LINE L1 5661 5730 -436 181 106 21 43 chr10 40266878 40266925 -100049840 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 236 234 0 0 chr10 40267604 40267668 -100049097 - Charlie1 DNA MER1_type -67 2694 2631 756 279 5 22 chr10 40267681 40267903 -100048862 - Charlie1 DNA MER1_type -2542 219 2 300 333 6 18 chr10 40268096 40268261 -100048504 + CT-rich Low_complexity Low_complexity 1 163 0 2920 162 0 2 chr10 40268595 40269096 -100047669 - L1PA16 LINE L1 -20 6146 5647 327 304 71 48 chr10 40269106 40269669 -100047096 - L1MEc LINE L1 -3161 3054 2479 5428 247 72 35 chr10 40270342 40270866 -100045899 - L1ME1 LINE L1 -5 6161 5658 1108 237 17 4 chr10 40270866 40271102 -100045663 + MER8 DNA MER2_type 1 239 0 5428 247 72 35 chr10 40271102 40273726 -100043039 - L1ME1 LINE L1 -508 5658 2766 561 262 23 70 chr10 40273748 40273965 -100042800 - L1MEc LINE L1 -3716 2499 2330 3113 78 0 0 chr10 40273965 40274374 -100042391 - L1PA8 LINE L1 -2 6170 5762 561 262 23 70 chr10 40274374 40274475 -100042290 - L1MEc LINE L1 -3885 2330 2226 258 295 19 67 chr10 40274480 40274585 -100042180 + MIR SINE MIR 163 262 0 21 36 0 0 chr10 40274835 40274863 -100041902 + AT_rich Low_complexity Low_complexity 1 28 0 2444 71 3 0 chr10 40275368 40275676 -100041089 - AluY SINE Alu -2 309 1 1725 152 3 27 chr10 40276732 40276866 -100039899 + AluJo SINE Alu 12 148 -164 911 95 22 22 chr10 40276866 40277045 -100039720 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1725 152 3 27 chr10 40277045 40277219 -100039546 + AluJo SINE Alu 148 300 -12 393 157 20 10 chr10 40278824 40278926 -100037839 + (TG)n Simple_repeat Simple_repeat 1 103 0 30 27 0 0 chr10 40280972 40281009 -100035756 + AT_rich Low_complexity Low_complexity 1 37 0 742 217 97 14 chr10 40281778 40281995 -100034770 - MIR SINE MIR -10 252 18 648 248 0 0 chr10 40282641 40282766 -100033999 - FLAM_A SINE Alu -8 125 1 234 243 29 29 chr10 40282852 40282955 -100033810 + A-rich Low_complexity Low_complexity 2 104 0 302 311 132 5 chr10 40283610 40283822 -100032943 + L1MC4a LINE L1 5693 5931 -1877 426 174 0 0 chr10 40284135 40284204 -100032561 - AluJ/FLAM SINE Alu -235 77 9 1533 166 13 67 chr10 40285244 40285557 -100031208 - AluJo SINE Alu -8 304 9 22 35 0 0 chr10 40285854 40285883 -100030882 + AT_rich Low_complexity Low_complexity 1 29 0 1626 166 21 11 chr10 40285883 40286166 -100030599 - AluJo SINE Alu -25 287 2 198 0 0 0 chr10 40287400 40287422 -100029343 + (TA)n Simple_repeat Simple_repeat 2 23 0 684 133 0 50 chr10 40287424 40287544 -100029221 - FLAM_C SINE Alu -24 119 6 453 279 23 58 chr10 40287717 40287889 -100028876 - MIR SINE MIR -56 206 41 237 183 0 100 chr10 40288754 40288814 -100027951 + LTR67 LTR ERVL 439 492 -65 1220 176 107 42 chr10 40288816 40288851 -100027914 - MLT2B1 LTR ERVL -8 512 481 297 0 0 0 chr10 40288851 40288884 -100027881 + (CAA)n Simple_repeat Simple_repeat 3 35 0 1220 176 107 42 chr10 40288884 40289290 -100027475 - MLT2B1 LTR ERVL -39 481 5 816 151 32 0 chr10 40289387 40289513 -100027252 + FLAM_C SINE Alu 1 130 -3 2104 109 0 3 chr10 40289911 40290256 -100026509 - AluY SINE Alu 0 344 1 4787 196 93 65 chr10 40290777 40291406 -100025359 - Charlie1a DNA MER1_type -1308 1453 843 1624 163 10 27 chr10 40291406 40291700 -100025065 + AluJo SINE Alu 1 289 -23 4787 196 93 65 chr10 40291700 40292483 -100024282 - Charlie1a DNA MER1_type -1918 843 1 1725 158 0 0 chr10 40292500 40292747 -100024018 + AluSx SINE Alu 46 292 -20 392 245 126 13 chr10 40292755 40292914 -100023851 - MIR SINE MIR -21 241 65 2548 123 70 29 chr10 40293355 40293770 -100022995 + MSTB1 LTR MaLR 1 432 0 2250 155 11 16 chr10 40294604 40294972 -100021793 + MLT2D LTR ERVL 1 366 -48 360 0 0 0 chr10 40294981 40295021 -100021744 + (TG)n Simple_repeat Simple_repeat 1 40 0 1717 146 58 139 chr10 40295625 40296056 -100020709 + MSTD LTR MaLR 1 396 0 635 241 107 62 chr10 40297331 40297817 -100018948 - L1MC4 LINE L1 -1 8041 7534 981 345 46 52 chr10 40297833 40298520 -100018245 + ERVL LTR ERVL 4407 5089 -675 1116 162 142 111 chr10 40298520 40298872 -100017893 - MLT1A1 LTR MaLR 0 365 3 981 345 46 52 chr10 40298872 40299110 -100017655 + ERVL LTR ERVL 5089 5327 -437 21 0 0 0 chr10 40299185 40299206 -100017559 + AT_rich Low_complexity Low_complexity 1 21 0 723 268 82 18 chr10 40299316 40299667 -100017098 + LTR16C LTR ERVL 79 491 0 365 262 7 0 chr10 40299883 40299974 -100016791 - L1MC/D LINE L1 -560 5610 5534 556 281 31 27 chr10 40299976 40300232 -100016533 - L1MCa LINE L1 -4765 1661 1405 1038 230 22 50 chr10 40300297 40300400 -100016365 - L1MC/D LINE L1 -639 5525 5421 2031 87 40 25 chr10 40300400 40300768 -100015997 - AluY SINE Alu 0 372 1 1038 230 22 50 chr10 40300768 40301159 -100015606 - L1MC/D LINE L1 -743 5421 5049 572 261 46 46 chr10 40301270 40301576 -100015189 - L1MC/D LINE L1 -1388 4758 4453 1551 240 94 27 chr10 40301787 40302156 -100014609 + MLT1C LTR MaLR 1 405 -62 1969 152 0 0 chr10 40302156 40302452 -100014313 - AluY SINE Alu -15 296 1 1551 240 94 27 chr10 40302452 40302520 -100014245 + MLT1C LTR MaLR 405 467 0 822 148 23 0 chr10 40303316 40303444 -100013321 - AluSg/x SINE Alu -22 288 158 1802 163 20 10 chr10 40303984 40304290 -100012475 - AluSx SINE Alu -1 311 3 1642 193 122 21 chr10 40304556 40304702 -100012063 + LOR1b LTR ERV1 1 131 -330 2290 93 0 20 chr10 40304702 40305003 -100011762 + AluSg SINE Alu 1 295 -15 1642 193 122 21 chr10 40305003 40305275 -100011490 + LOR1b LTR ERV1 131 461 0 345 169 133 24 chr10 40305294 40305377 -100011388 + MER63 DNA MER1_type 33 750 -86 280 182 0 0 chr10 40305414 40305458 -100011307 + Alu SINE Alu 2 45 -255 991 139 33 7 chr10 40305458 40305609 -100011156 + AluSg/x SINE Alu 137 291 -21 2254 96 0 7 chr10 40305839 40306130 -100010635 - AluY SINE Alu -22 289 1 1149 137 66 38 chr10 40306131 40306342 -100010423 - AluJo SINE Alu -9 303 87 2160 127 3 0 chr10 40306478 40306769 -100009996 + AluSx SINE Alu 1 292 -20 2186 122 3 0 chr10 40306774 40307078 -100009687 + AluSc SINE Alu 1 305 -4 1853 157 37 3 chr10 40307197 40307497 -100009268 + AluY SINE Alu 1 310 -1 396 290 83 6 chr10 40307541 40307710 -100009055 - MER5A DNA MER1_type -7 182 1 2184 94 21 0 chr10 40307793 40308079 -100008686 + AluSp SINE Alu 4 295 -18 1774 123 0 0 chr10 40308644 40308879 -100007886 - AluSq SINE Alu -78 235 1 2027 116 4 0 chr10 40308883 40309183 -100007582 - AluSp SINE Alu 0 309 9 1514 158 9 94 chr10 40309294 40309441 -100007324 + AluJo SINE Alu 1 159 -153 2430 83 0 3 chr10 40309441 40309743 -100007022 + AluSp SINE Alu 1 301 -12 1514 158 9 94 chr10 40309743 40309822 -100006943 + AluJo SINE Alu 159 193 -119 2373 92 0 0 chr10 40309822 40310125 -100006640 - AluY SINE Alu -8 303 1 1514 158 9 94 chr10 40310125 40310226 -100006539 + AluJo SINE Alu 193 301 -11 310 291 51 0 chr10 40311063 40311142 -100005623 + L2 LINE L2 3231 3313 0 2213 122 0 0 chr10 40311266 40311554 -100005211 - AluSg SINE Alu -22 288 1 2118 144 6 6 chr10 40311852 40312164 -100004601 + AluSx SINE Alu 1 312 0 2239 120 13 3 chr10 40312342 40312650 -100004115 + AluSx SINE Alu 1 311 -1 2258 102 0 23 chr10 40312965 40313270 -100003495 + AluSx SINE Alu 1 298 -14 1976 156 0 0 chr10 40313867 40314155 -100002610 + AluSx SINE Alu 1 288 -24 2054 129 3 3 chr10 40314236 40314539 -100002226 - AluSg SINE Alu -3 307 5 2089 124 3 0 chr10 40314887 40315178 -100001587 + AluSc SINE Alu 1 292 -17 1727 153 3 28 chr10 40315313 40315601 -100001164 - AluJo SINE Alu 0 312 32 1433 195 31 21 chr10 40316008 40316271 -100000494 + AluJo SINE Alu 1 269 -43 2385 89 0 3 chr10 40316271 40316574 -100000191 - AluY SINE Alu -9 302 1 1433 195 31 21 chr10 40316574 40316597 -100000168 + AluJo SINE Alu 269 290 -22 585 281 26 0 chr10 40316606 40316759 -100000006 - MIR SINE MIR 0 262 106 2237 119 0 0 chr10 40317413 40317708 -99999057 - AluSg SINE Alu -13 297 3 1969 129 35 0 chr10 40317711 40317998 -99998767 - AluSx SINE Alu -15 297 1 784 151 7 36 chr10 40318005 40318144 -99998621 - AluJb SINE Alu -176 136 2 211 209 202 78 chr10 40318289 40318418 -99998347 - MIR SINE MIR -116 146 2 2139 109 0 0 chr10 40318865 40319140 -99997625 + AluSg SINE Alu 1 275 -35 2130 131 0 0 chr10 40319703 40319994 -99996771 - AluSc SINE Alu -18 291 1 2027 117 31 0 chr10 40320221 40320512 -99996253 + AluSx SINE Alu 1 300 -12 576 106 0 0 chr10 40320512 40320597 -99996168 + (GGGGA)n Simple_repeat Simple_repeat 1 85 0 194 265 0 0 chr10 40320755 40320804 -99995961 - L2 LINE L2 -3 3269 3221 2366 113 0 0 chr10 40321284 40321593 -99995172 + AluSc SINE Alu 1 309 0 212 133 0 44 chr10 40321779 40321824 -99994941 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1881 103 77 0 chr10 40322029 40322301 -99994464 + AluSc SINE Alu 1 293 -16 1526 180 36 11 chr10 40322310 40322660 -99994105 + AluSq SINE Alu 1 357 0 322 321 58 70 chr10 40322711 40322950 -99993815 + L1ME4a LINE L1 4747 4982 -1164 2297 89 0 3 chr10 40322950 40323241 -99993524 + AluY SINE Alu 1 290 -21 322 321 58 70 chr10 40323241 40323328 -99993437 + L1ME4a LINE L1 4982 5069 -1077 387 0 0 0 chr10 40323351 40323394 -99993371 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1773 156 11 0 chr10 40323394 40323670 -99993095 - AluSx SINE Alu -32 280 2 1540 181 53 0 chr10 40323847 40324129 -99992636 + AluJo SINE Alu 1 297 -15 2461 81 7 0 chr10 40324188 40324497 -99992268 + AluY SINE Alu 1 311 0 1096 258 128 42 chr10 40324503 40324981 -99991784 + L1ME4a LINE L1 5315 5878 -243 1413 202 49 91 chr10 40324981 40325205 -99991560 + MSTB1 LTR MaLR 1 198 -234 1480 186 28 17 chr10 40325205 40325496 -99991269 + AluJo SINE Alu 1 294 -18 1413 202 49 91 chr10 40325496 40325721 -99991044 + MSTB1 LTR MaLR 198 431 -1 1096 258 128 42 chr10 40325721 40325887 -99990878 + L1ME4a LINE L1 5878 6028 -93 280 42 0 42 chr10 40325921 40325969 -99990796 + (TCCCC)n Simple_repeat Simple_repeat 1 46 0 820 242 0 0 chr10 40325969 40326134 -99990631 - FRAM SINE Alu -15 161 1 1794 154 6 49 chr10 40326621 40326946 -99989819 + AluSx SINE Alu 1 311 -1 467 258 92 6 chr10 40327167 40327330 -99989435 + MER69A DNA AcHobo 1 177 0 454 219 47 120 chr10 40327407 40327496 -99989269 - Charlie8 DNA MER1_type -163 178 109 2251 128 0 0 chr10 40327496 40327793 -99988972 + AluSx SINE Alu 1 297 -15 454 219 47 120 chr10 40327793 40327895 -99988870 - Charlie8 DNA MER1_type -232 109 1 1966 139 0 20 chr10 40328772 40329074 -99987691 - AluSg SINE Alu -14 296 1 1707 153 33 4 chr10 40329303 40329620 -99987145 - AluSq SINE Alu 0 325 1 1753 197 3 0 chr10 40329652 40329957 -99986808 + AluJo SINE Alu 1 306 -6 259 306 72 18 chr10 40330112 40330223 -99986542 - L2 LINE L2 0 3272 3156 1835 137 6 35 chr10 40330250 40330563 -99986202 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr10 40330627 40330647 -99986118 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1643 123 0 0 chr10 40330670 40330898 -99985867 - AluSc SINE Alu -81 228 1 543 250 112 40 chr10 40330905 40331283 -99985482 - L1MEd LINE L1 -4862 1257 786 2175 142 0 0 chr10 40331473 40331784 -99984981 - AluSx SINE Alu -1 311 1 229 325 75 0 chr10 40331874 40331994 -99984771 - L1MEd LINE L1 -5482 637 509 195 304 156 44 chr10 40332385 40332520 -99984245 + MIR SINE MIR 39 188 -74 218 246 103 119 chr10 40332558 40332616 -99984149 + L2 LINE L2 3167 3224 -89 2076 130 10 0 chr10 40332616 40332909 -99983856 + AluSg SINE Alu 1 296 -14 218 246 103 119 chr10 40332909 40332976 -99983789 + L2 LINE L2 3224 3290 -23 1608 177 18 21 chr10 40333044 40333327 -99983438 + AluJo SINE Alu 1 282 -30 2254 112 0 3 chr10 40333609 40333903 -99982862 - AluSx SINE Alu -19 293 1 225 128 0 0 chr10 40333981 40334020 -99982745 - L1ME LINE L1 -415 5755 5717 1892 163 10 3 chr10 40334540 40334841 -99981924 - AluJb SINE Alu -9 303 1 1366 160 3 134 chr10 40335052 40335140 -99981625 - MER47A DNA MER2_type -1958 365 267 2017 137 3 3 chr10 40335140 40335425 -99981340 - AluSx SINE Alu -27 285 1 1366 160 3 134 chr10 40335425 40335564 -99981201 - MER47A DNA MER2_type -2056 267 111 1978 108 0 7 chr10 40335564 40335833 -99980932 + AluSq SINE Alu 38 304 -9 1366 160 3 134 chr10 40335833 40335914 -99980851 - MER47A DNA MER2_type -2212 111 113 1906 164 13 0 chr10 40335914 40336212 -99980553 - AluJb SINE Alu -2 310 9 1366 160 3 134 chr10 40336212 40336289 -99980476 - MER47A DNA MER2_type -2209 114 29 2286 110 10 0 chr10 40336291 40336600 -99980165 + AluSq SINE Alu 1 312 -1 371 220 0 60 chr10 40336641 40336741 -99980024 - MIR SINE MIR -104 158 65 2048 129 14 7 chr10 40336947 40337242 -99979523 - AluSx SINE Alu -15 297 1 1383 138 0 0 chr10 40338627 40338830 -99977935 - AluSq SINE Alu -47 266 64 484 197 0 116 chr10 40338830 40338977 -99977788 - MLT2B1 LTR ERVL -261 259 130 214 215 143 71 chr10 40339047 40339170 -99977595 + MIR SINE MIR 12 141 -67 2280 119 13 26 chr10 40339180 40339429 -99977336 + L1PA15 LINE L1 5658 5902 -263 2065 131 7 10 chr10 40339429 40339726 -99977039 + AluSx SINE Alu 1 296 -16 2280 119 13 26 chr10 40339726 40339864 -99976901 + L1PA15 LINE L1 5902 6040 -125 857 152 0 51 chr10 40339866 40340004 -99976761 + AluSq/x SINE Alu 6 136 -176 2138 127 0 0 chr10 40340004 40340287 -99976478 + AluSg SINE Alu 1 283 -27 755 169 0 7 chr10 40340307 40340449 -99976316 + L1PA15 LINE L1 6025 6165 0 2142 111 3 20 chr10 40340637 40340935 -99975830 - AluSx SINE Alu -19 293 1 5551 135 30 42 chr10 40341851 40342832 -99973933 + LTR5 LTR ERVK 1 969 0 21 0 0 0 chr10 40343090 40343111 -99973654 + AT_rich Low_complexity Low_complexity 1 21 0 2148 107 3 13 chr10 40343168 40343468 -99973297 - AluSx SINE Alu -15 297 1 2022 109 4 11 chr10 40343616 40343891 -99972874 + AluSg SINE Alu 1 273 -37 6312 172 11 11 chr10 40343897 40345216 -99971549 + MSTA-int LTR MaLR 296 1571 -9 1854 153 128 36 chr10 40345225 40345617 -99971148 + MSTA LTR MaLR 1 428 0 228 319 191 47 chr10 40345900 40346523 -99970242 - L2 LINE L2 -665 2649 1937 21 0 0 0 chr10 40347064 40347085 -99969680 + AT_rich Low_complexity Low_complexity 1 21 0 486 49 0 0 chr10 40347184 40347245 -99969520 + (TA)n Simple_repeat Simple_repeat 1 61 0 530 230 123 8 chr10 40347364 40347625 -99969140 + MER33 DNA MER1_type 17 307 -17 2316 67 0 0 chr10 40348489 40348771 -99967994 - AluY SINE Alu -13 298 17 24 53 0 0 chr10 40348792 40348830 -99967935 + AT_rich Low_complexity Low_complexity 1 38 0 2084 98 7 0 chr10 40350310 40350616 -99966149 + AluSc SINE Alu 1 308 0 239 295 0 0 chr10 40350902 40350980 -99965785 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 327 383 39 0 chr10 40351061 40351241 -99965524 - HAL1 LINE L1 -104 2403 2217 26 0 0 0 chr10 40351260 40351286 -99965479 + AT_rich Low_complexity Low_complexity 1 26 0 285 119 15 30 chr10 40351314 40351381 -99965384 + (TA)n Simple_repeat Simple_repeat 1 66 0 282 297 31 40 chr10 40351671 40351893 -99964872 - HAL1 LINE L1 -722 1785 1566 1226 271 88 16 chr10 40351947 40352378 -99964387 + LTR40b LTR ERVL 1 462 0 2142 119 3 0 chr10 40352860 40353153 -99963612 - AluSx SINE Alu -14 298 5 761 161 0 8 chr10 40353168 40353292 -99963473 - AluSg/x SINE Alu -18 294 172 2076 132 3 0 chr10 40353399 40353694 -99963071 - AluSg SINE Alu -14 296 1 2090 102 10 3 chr10 40353784 40354077 -99962688 - AluY SINE Alu -16 295 1 274 196 0 18 chr10 40354282 40354338 -99962427 - MIR SINE MIR -38 224 170 1846 174 3 3 chr10 40354368 40354666 -99962099 + AluJb SINE Alu 10 307 -5 23 0 0 0 chr10 40355452 40355475 -99961290 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr10 40355542 40355569 -99961196 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2267 70 0 11 chr10 40355571 40355857 -99960908 - AluY SINE Alu -28 283 1 541 260 103 5 chr10 40356063 40356267 -99960498 + Charlie1 DNA MER1_type 16 239 -2522 238 77 39 58 chr10 40356317 40356369 -99960396 - Charlie1 DNA MER1_type -16 2745 2695 218 163 47 0 chr10 40356406 40356449 -99960316 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 188 216 0 0 chr10 40356998 40357035 -99959730 - MIR SINE MIR -115 147 111 21 0 0 0 chr10 40358735 40358756 -99958009 + AT_rich Low_complexity Low_complexity 1 21 0 2046 148 22 27 chr10 40358873 40359239 -99957526 + THE1B LTR MaLR 1 364 0 10928 117 11 2 chr10 40359239 40360804 -99955961 + THE1B-int LTR MaLR 1 1580 0 1987 135 21 81 chr10 40360806 40361191 -99955574 + THE1B LTR MaLR 3 364 0 22 0 0 0 chr10 40361275 40361297 -99955468 + AT_rich Low_complexity Low_complexity 1 22 0 193 289 44 0 chr10 40361703 40361748 -99955017 + MER5A DNA MER1_type 103 149 -40 1024 342 47 23 chr10 40361841 40362396 -99954369 + L2 LINE L2 2260 2827 -487 2256 93 30 0 chr10 40362460 40362760 -99954005 - AluY SINE Alu -2 309 1 1338 217 24 73 chr10 40363086 40363496 -99953269 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr10 40363936 40363958 -99952807 + AT_rich Low_complexity Low_complexity 1 22 0 2170 94 14 3 chr10 40364254 40364541 -99952224 + AluY SINE Alu 1 290 -21 23 54 0 0 chr10 40364707 40364744 -99952021 + AT_rich Low_complexity Low_complexity 1 37 0 204 40 0 0 chr10 40365184 40365209 -99951556 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 270 269 0 56 chr10 40365749 40365857 -99950908 + GA-rich Low_complexity Low_complexity 5 106 0 561 280 113 6 chr10 40365886 40366054 -99950711 - MIR SINE MIR -37 225 40 1448 194 17 31 chr10 40366229 40366518 -99950247 + AluJo SINE Alu 1 285 -27 354 330 86 30 chr10 40366609 40366876 -99949889 - HAL1 LINE L1 -961 1546 1265 365 318 88 40 chr10 40366966 40367240 -99949525 + L2 LINE L2 3026 3312 -1 941 205 0 133 chr10 40368606 40368952 -99947813 - MLT1B LTR MaLR 0 390 91 237 227 0 0 chr10 40368992 40369058 -99947707 + (TA)n Simple_repeat Simple_repeat 1 66 0 310 249 110 69 chr10 40369388 40369561 -99947204 - L1MC5 LINE L1 -24 7937 7758 31 26 0 0 chr10 40369595 40369633 -99947132 + AT_rich Low_complexity Low_complexity 1 38 0 762 183 23 0 chr10 40369750 40369881 -99946884 + FRAM SINE Alu 26 159 -17 2217 96 0 0 chr10 40369883 40370186 -99946579 + AluSg SINE Alu 1 303 0 1400 197 37 43 chr10 40370189 40370527 -99946238 + AluJb SINE Alu 1 336 0 25 0 0 0 chr10 40370998 40371023 -99945742 + AT_rich Low_complexity Low_complexity 1 25 0 228 24 122 0 chr10 40372737 40372778 -99943987 + L1HS LINE L1 6110 6155 0 1117 150 26 0 chr10 40373448 40373641 -99943124 - Tigger3(Golem) DNA MER2_type -1 3028 2831 1440 166 7 90 chr10 40373646 40373999 -99942766 + AluJo SINE Alu 6 333 0 3099 113 36 11 chr10 40373999 40374548 -99942217 - Tigger3(Golem) DNA MER2_type -189 2840 2278 372 188 208 0 chr10 40374525 40374626 -99942139 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 288 224 60 0 chr10 40377289 40377356 -99939409 + Charlie2 DNA MER1_type 255 325 -2457 1208 208 72 12 chr10 40377359 40377705 -99939060 + Charlie2 DNA MER1_type 1857 2223 -639 848 204 218 14 chr10 40378101 40378600 -99938165 + Charlie2 DNA MER1_type 2262 2862 0 2357 172 35 16 chr10 40379375 40379799 -99936966 - MSTB1 LTR MaLR 0 432 1 2714 103 3 3 chr10 40379822 40380191 -99936574 + L1PA8 LINE L1 5801 6169 -3 430 238 197 0 chr10 40380254 40380401 -99936364 - MIR SINE MIR 0 262 87 1413 211 96 38 chr10 40380411 40380828 -99935937 - MER39 LTR ERV1 0 707 267 241 276 92 0 chr10 40380908 40380984 -99935781 - MIR SINE MIR -179 83 1 199 313 78 0 chr10 40383268 40383332 -99933433 - L2 LINE L2 -51 3221 3153 934 192 59 0 chr10 40383333 40383536 -99933229 + MER33 DNA MER1_type 1 215 -109 1714 169 11 0 chr10 40383536 40383838 -99932927 - AluJb SINE Alu 0 305 1 199 311 85 47 chr10 40383864 40383970 -99932795 + MIR SINE MIR 104 213 -49 1194 101 6 12 chr10 40384890 40384913 -99931852 - MER107 DNA MER1_type -29 168 146 182 36 0 36 chr10 40384913 40384941 -99931824 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1194 101 6 12 chr10 40384941 40385086 -99931679 - MER107 DNA MER1_type -51 146 1 221 0 35 0 chr10 40386131 40386160 -99930605 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 44006 46 6 1 chr10 40386508 40392630 -99924135 + L1PA4 LINE L1 1 6155 0 964 174 0 0 chr10 40394015 40394197 -99922568 - FRAM SINE Alu 0 179 1 526 216 122 34 chr10 40395001 40395246 -99921519 + MER34 LTR ERV1 229 542 0 332 339 60 55 chr10 40395341 40395487 -99921278 - MIR3 SINE MIR -22 186 37 1903 162 3 0 chr10 40395487 40395784 -99920981 - AluSx SINE Alu -14 298 1 332 339 60 55 chr10 40395784 40395820 -99920945 - MIR3 SINE MIR -171 37 3 1381 161 8 24 chr10 40395847 40396101 -99920664 + AluJo SINE Alu 42 291 -21 30 0 0 0 chr10 40396102 40396132 -99920633 + AT_rich Low_complexity Low_complexity 1 30 0 263 220 154 44 chr10 40396163 40396254 -99920511 - MER91B DNA MER1_type -89 101 1 1676 187 0 0 chr10 40396729 40397018 -99919747 - AluJo SINE Alu -20 292 4 2136 158 40 15 chr10 40398258 40398586 -99918179 - MER1B DNA MER1_type -1 336 1 4237 105 2 2 chr10 40398748 40399302 -99917463 + MER41A LTR ERV1 1 554 0 202 261 166 38 chr10 40399647 40399858 -99916907 - L2 LINE L2 -419 2895 2658 256 220 0 34 chr10 40400127 40400186 -99916579 + MER5A DNA MER1_type 1 57 -132 1543 192 7 13 chr10 40400244 40400546 -99916219 - AluJo SINE Alu -9 303 4 1334 101 6 6 chr10 40400563 40400741 -99916024 + AluSp SINE Alu 1 178 -135 1862 171 0 10 chr10 40400929 40401228 -99915537 + AluJb SINE Alu 1 296 -16 280 61 0 41 chr10 40401381 40401430 -99915335 + (CAT)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr10 40402149 40402170 -99914595 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 295 196 19 0 chr10 40403112 40403174 -99913591 - FLAM SINE Alu -16 117 71 630 149 0 0 chr10 40403182 40403276 -99913489 + AluJ/FRAM SINE Alu 216 309 -3 840 158 23 0 chr10 40403930 40404063 -99912702 + AluJo SINE Alu 1 136 -176 1569 200 7 4 chr10 40405045 40405325 -99911440 - AluJo SINE Alu -31 281 1 708 199 0 30 chr10 40405873 40406004 -99910761 - FLAM_A SINE Alu -9 133 7 276 322 43 48 chr10 40406199 40406429 -99910336 - L2 LINE L2 -450 2864 2636 2122 114 0 7 chr10 40406490 40406779 -99909986 + AluY SINE Alu 6 292 -19 1045 166 0 18 chr10 40406787 40406950 -99909815 + AluJb SINE Alu 135 294 -18 243 257 0 0 chr10 40407362 40407436 -99909329 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 28 29 0 0 chr10 40407467 40407502 -99909263 + AT_rich Low_complexity Low_complexity 1 35 0 664 236 0 0 chr10 40407550 40407677 -99909088 - FLAM_A SINE Alu -6 127 1 437 240 5 88 chr10 40407761 40407840 -99908925 - L1ME LINE L1 -359 5762 5678 2155 151 10 68 chr10 40407840 40408252 -99908513 - MLT1B LTR MaLR -2 388 1 437 240 5 88 chr10 40408252 40408376 -99908389 - L1ME LINE L1 -443 5678 5576 2698 89 43 3 chr10 40408405 40408755 -99908010 - THE1B LTR MaLR 0 364 1 330 256 58 73 chr10 40408798 40408989 -99907776 - MLT1J LTR MaLR -10 501 314 791 231 187 11 chr10 40409000 40409268 -99907497 + L2 LINE L2 2932 3246 -67 354 304 0 0 chr10 40409271 40409363 -99907402 + (CA)n Simple_repeat Simple_repeat 1 92 0 379 224 19 25 chr10 40409414 40409575 -99907190 + CT-rich Low_complexity Low_complexity 4 163 0 307 274 83 0 chr10 40409582 40409666 -99907099 - MIR SINE MIR -99 109 19 810 142 8 8 chr10 40410074 40410201 -99906564 - AluJb SINE Alu -185 127 1 987 298 119 11 chr10 40410461 40410898 -99905867 + L2 LINE L2 2804 3287 -26 601 153 41 20 chr10 40410900 40410998 -99905767 - AluJo SINE Alu -25 287 188 * 812 138 17 0 chr10 40410996 40411112 -99905653 - AluJo SINE Alu -192 120 3 24 32 0 0 chr10 40411116 40411147 -99905618 + AT_rich Low_complexity Low_complexity 1 31 0 273 231 204 9 chr10 40411207 40411315 -99905450 + MER117 DNA MER1_type 4 132 -65 888 155 0 14 chr10 40411733 40411875 -99904890 - AluJb SINE Alu -16 296 157 2039 120 0 17 chr10 40413128 40413459 -99903306 + AluSc SINE Alu 1 309 0 1819 176 0 19 chr10 40413809 40414116 -99902649 + AluJo SINE Alu 1 301 -11 273 196 0 0 chr10 40414285 40414341 -99902424 + (TA)n Simple_repeat Simple_repeat 2 57 0 214 172 35 0 chr10 40414390 40414432 -99902333 + (TA)n Simple_repeat Simple_repeat 1 47 -13 5361 146 75 44 chr10 40414432 40415469 -99901296 + MER11C LTR ERVK 3 1071 0 214 172 35 0 chr10 40415469 40415484 -99901281 + (TA)n Simple_repeat Simple_repeat 47 60 0 361 113 0 0 chr10 40415620 40415682 -99901083 - L1MA7 LINE L1 -1 6290 6229 5831 261 45 28 chr10 40415682 40418189 -99898576 - L1 LINE L1 -2498 3536 1334 1226 238 74 15 chr10 40418189 40418513 -99898252 - MER2 DNA MER2_type 0 344 2 5831 261 45 28 chr10 40418513 40419565 -99897200 - L1 LINE L1 -4700 1334 302 247 307 147 43 chr10 40419676 40420002 -99896763 - L1M3a LINE L1 -5251 704 345 1172 334 7 10 chr10 40420043 40420456 -99896309 - L1M3a LINE L1 -5532 423 12 22 56 0 0 chr10 40420482 40420518 -99896247 + AT_rich Low_complexity Low_complexity 1 36 0 2111 191 30 7 chr10 40421896 40422331 -99894434 - L1MA6 LINE L1 0 6300 5856 2574 223 77 47 chr10 40422410 40423074 -99893691 + MLT1A1-int LTR MaLR 1052 1735 0 1301 231 126 3 chr10 40423074 40423399 -99893366 + MLT1A1 LTR MaLR 1 365 0 2381 78 0 7 chr10 40423928 40424236 -99892529 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 40424528 40424552 -99892213 + AT_rich Low_complexity Low_complexity 1 24 0 1456 251 35 43 chr10 40425603 40426096 -99890669 + L1ME1 LINE L1 5676 6164 -2 403 272 82 13 chr10 40426621 40426779 -99889986 - MIR SINE MIR -63 199 31 2275 84 13 10 chr10 40426855 40427154 -99889611 + AluY SINE Alu 1 300 -11 226 53 79 26 chr10 40428020 40428096 -99888669 + (TA)n Simple_repeat Simple_repeat 1 80 0 2268 88 0 41 chr10 40428143 40428461 -99888304 + AluY SINE Alu 1 305 -6 1731 102 50 79 chr10 40428951 40429254 -99887511 + AluSq SINE Alu 1 294 -19 35 0 0 0 chr10 40429265 40429300 -99887465 + AT_rich Low_complexity Low_complexity 1 35 0 403 296 96 0 chr10 40430031 40430166 -99886599 - MIR SINE MIR -66 196 49 224 208 21 0 chr10 40430535 40430583 -99886182 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 40431060 40431082 -99885683 + AT_rich Low_complexity Low_complexity 1 22 0 462 227 127 0 chr10 40432064 40432174 -99884591 + FLAM_A SINE Alu 1 124 -9 229 368 59 34 chr10 40432189 40432235 -99884530 - L2 LINE L2 -584 2730 2687 2455 71 0 3 chr10 40432235 40432531 -99884234 + AluY SINE Alu 1 295 -16 229 368 59 34 chr10 40432531 40432688 -99884077 - L2 LINE L2 -627 2687 2522 3690 204 28 22 chr10 40432694 40433506 -99883259 + L1MB8 LINE L1 4966 5793 -385 2268 107 7 0 chr10 40433506 40433805 -99882960 - AluSq SINE Alu -12 301 1 3690 204 28 22 chr10 40433805 40434189 -99882576 + L1MB8 LINE L1 5793 6173 -5 200 254 254 36 chr10 40434404 40434569 -99882196 - L2 LINE L2 -1038 2276 2076 1875 132 10 52 chr10 40434793 40434936 -99881829 + AluSq SINE Alu 1 148 -165 2187 78 46 4 chr10 40434936 40435217 -99881548 + AluSc SINE Alu 1 293 -16 1875 132 10 52 chr10 40435217 40435383 -99881382 + AluSq SINE Alu 148 297 -16 1633 176 10 3 chr10 40436554 40436843 -99879922 - AluJo SINE Alu -21 291 1 2116 141 0 3 chr10 40437388 40437694 -99879071 + AluSq SINE Alu 1 305 -8 25 31 0 0 chr10 40437950 40437982 -99878783 + AT_rich Low_complexity Low_complexity 1 32 0 425 93 0 0 chr10 40438693 40438747 -99878018 + Alu SINE Alu 229 282 -27 2167 123 7 0 chr10 40439100 40439417 -99877348 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 40440309 40440334 -99876431 + AT_rich Low_complexity Low_complexity 1 25 0 927 273 95 48 chr10 40440471 40440987 -99875778 + MLT1F LTR MaLR 1 540 -2 21 36 0 0 chr10 40441252 40441280 -99875485 + AT_rich Low_complexity Low_complexity 1 28 0 308 235 12 71 chr10 40441581 40441666 -99875099 + Tigger3(Golem) DNA MER2_type 2 81 -2948 298 109 0 0 chr10 40441678 40441724 -99875041 - AluSx SINE Alu -2 298 253 1268 108 48 0 chr10 40441724 40441891 -99874874 - AluSx SINE Alu -137 175 1 1604 126 45 4 chr10 40441895 40442164 -99874601 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 306 0 0 0 chr10 40443077 40443111 -99873654 + (TG)n Simple_repeat Simple_repeat 2 35 0 387 216 0 11 chr10 40443299 40443387 -99873378 - L1MCa LINE L1 -5762 664 578 2494 250 11 3 chr10 40443473 40444041 -99872724 - L1MCa LINE L1 -5816 610 39 1891 202 0 48 chr10 40444168 40444584 -99872181 + MSTD LTR MaLR 1 396 0 882 355 28 0 chr10 40444655 40445120 -99871645 - HERV16 LTR ERVL -3604 1392 915 320 362 122 24 chr10 40445256 40445795 -99870970 - HERV16 LTR ERVL -4337 659 68 400 324 96 42 chr10 40445874 40446279 -99870486 + LTR16A1 LTR ERVL 1 427 -30 270 337 126 26 chr10 40446286 40446675 -99870090 - LTR16A1 LTR ERVL -29 428 1 1512 211 62 130 chr10 40446801 40447668 -99869097 - L1PA15-16 LINE L1 -2895 3954 3147 6105 124 6 6 chr10 40447691 40448702 -99868063 - L1MA2 LINE L1 0 6304 5294 1022 196 10 0 chr10 40448700 40448904 -99867861 - L1MA2 LINE L1 -1977 4169 3964 * 1631 196 5 0 chr10 40448907 40449295 -99867470 - L1PA15-16 LINE L1 -3703 3146 2757 356 202 67 19 chr10 40451513 40451617 -99865148 - L1PA15-16 LINE L1 -4070 2779 2671 2796 127 42 8 chr10 40451620 40452100 -99864665 + L1PA15 LINE L1 5669 6164 -1 1918 134 36 55 chr10 40452225 40452590 -99864175 + MLT2D LTR ERVL 1 358 -56 201 74 0 0 chr10 40452607 40452634 -99864131 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 198 118 0 0 chr10 40452635 40452669 -99864096 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 267 0 0 chr10 40452670 40452715 -99864050 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 313 48 0 0 chr10 40452897 40452939 -99863826 - U3 snRNA snRNA -175 42 1 637 279 44 3 chr10 40453096 40453394 -99863371 + L1ME3A LINE L1 2268 2577 -3569 814 319 68 19 chr10 40453409 40453980 -99862785 + L1ME3A LINE L1 5523 6121 -49 17033 34 1 0 chr10 40454212 40457047 -99859718 + L1PA3 LINE L1 3317 6152 -3 192 77 0 0 chr10 40457292 40457318 -99859447 + (A)n Simple_repeat Simple_repeat 1 26 0 244 234 36 18 chr10 40457318 40457429 -99859336 + MER20B DNA MER1_type 663 775 -8 278 247 11 0 chr10 40457648 40457741 -99859024 + (GAATG)n Simple_repeat Simple_repeat 2 95 0 962 190 61 4 chr10 40458045 40458349 -99858416 + MLT1A1 LTR MaLR 8 365 0 22 0 0 0 chr10 40458972 40458994 -99857771 + AT_rich Low_complexity Low_complexity 1 22 0 1878 248 113 20 chr10 40459722 40459970 -99856795 - L1ME2 LINE L1 -10 6088 5865 2351 88 3 3 chr10 40459970 40460267 -99856498 - AluSx SINE Alu -7 305 9 1878 248 113 20 chr10 40460267 40460955 -99855810 - L1ME2 LINE L1 -233 5865 5066 351 0 0 0 chr10 40461379 40461418 -99855347 + (TG)n Simple_repeat Simple_repeat 2 40 0 2063 258 55 46 chr10 40461418 40462295 -99854470 - L1ME2 LINE L1 -3234 2846 1978 360 0 0 0 chr10 40462295 40462335 -99854430 + (TG)n Simple_repeat Simple_repeat 2 41 0 2063 258 55 46 chr10 40462335 40462594 -99854171 - L1ME2 LINE L1 -4102 1978 1723 2081 128 13 3 chr10 40462594 40462892 -99853873 - AluSg1 SINE Alu -8 301 1 2063 258 55 46 chr10 40462892 40463316 -99853449 - L1ME2 LINE L1 -4357 1723 1304 1780 179 10 0 chr10 40463316 40463442 -99853323 + AluSx SINE Alu 1 124 -188 270 116 0 0 chr10 40463442 40463485 -99853280 + (CA)n Simple_repeat Simple_repeat 2 44 0 1780 179 10 0 chr10 40463485 40463648 -99853117 + AluSx SINE Alu 124 293 -19 2063 258 55 46 chr10 40463648 40464193 -99852572 - L1ME2 LINE L1 -4776 1304 700 296 370 62 9 chr10 40464814 40465038 -99851727 - MIR SINE MIR -20 242 7 800 260 42 75 chr10 40466113 40466627 -99850138 - MLT1H LTR MaLR 0 549 11 1612 173 14 24 chr10 40466685 40466980 -99849785 - AluJo SINE Alu -20 292 1 2499 82 0 0 chr10 40467127 40467432 -99849333 - AluY SINE Alu -2 309 5 236 211 0 58 chr10 40467540 40467592 -99849173 - L2 LINE L2 -2 3270 3222 193 316 0 0 chr10 40468051 40468108 -99848657 - MER5B DNA MER1_type -105 73 17 324 365 74 34 chr10 40468130 40468684 -99848081 - L2 LINE L2 -552 2762 2187 287 378 16 8 chr10 40468708 40468835 -99847930 - MER5A DNA MER1_type -3 186 59 1659 209 35 8 chr10 40468956 40469330 -99847435 + MLT1B LTR MaLR 1 384 -6 273 280 21 27 chr10 40469748 40469858 -99846907 + GA-rich Low_complexity Low_complexity 1 109 0 226 216 0 0 chr10 40472407 40472458 -99844307 - L1M4 LINE L1 -3311 2835 2785 1747 45 0 0 chr10 40472480 40472681 -99844084 - AluY SINE Alu -15 296 96 648 49 0 0 chr10 40473437 40473519 -99843246 + AluY SINE Alu 1 82 -229 2226 124 0 3 chr10 40473962 40474268 -99842497 + AluSq SINE Alu 5 309 -4 42 41 0 52 chr10 40474688 40474785 -99841980 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr10 40474949 40474977 -99841788 + AT_rich Low_complexity Low_complexity 1 28 0 549 143 0 0 chr10 40475307 40475384 -99841381 - AluJ/FLAM SINE Alu -230 82 6 674 268 57 24 chr10 40475526 40475772 -99840993 + L2 LINE L2 3050 3303 -10 5373 86 18 0 chr10 40475772 40476532 -99840233 + L1PA11 LINE L1 5400 6173 -1 22 0 0 0 chr10 40476583 40476605 -99840160 + AT_rich Low_complexity Low_complexity 1 22 0 24744 40 3 3 chr10 40476646 40480488 -99836277 - L1PA4 LINE L1 0 6155 2310 709 264 11 22 chr10 40480668 40480846 -99835919 - MER45A DNA AcHobo -2 176 1 295 257 140 7 chr10 40480893 40481029 -99835736 + L2 LINE L2 3114 3267 -5 2214 114 0 0 chr10 40482236 40482517 -99834248 - AluSx SINE Alu -15 297 17 1836 203 36 31 chr10 40482824 40483273 -99833492 + pTR5 LTR ERV1 743 1193 -1245 306 368 59 18 chr10 40484145 40484417 -99832348 + HAL1 LINE L1 1105 1387 -1120 1848 153 29 132 chr10 40484661 40485145 -99831620 - Tigger2a DNA MER2_type 0 434 1 2804 188 28 33 chr10 40485513 40486118 -99830647 - LTR26 LTR ERV1 0 603 2 249 108 0 0 chr10 40486160 40486197 -99830568 + (TG)n Simple_repeat Simple_repeat 2 38 0 344 291 136 20 chr10 40486528 40486593 -99830172 + L1M4 LINE L1 2679 2735 -3411 2579 50 3 3 chr10 40486593 40486891 -99829874 + AluY SINE Alu 1 298 -13 344 291 136 20 chr10 40486891 40487127 -99829638 + L1M4 LINE L1 2735 3015 -3131 668 168 8 0 chr10 40488299 40488424 -99828341 + L1MA7 LINE L1 6166 6291 0 418 291 81 45 chr10 40489125 40489483 -99827282 - L1MDa LINE L1 -2602 3938 3568 6695 83 23 19 chr10 40489485 40489575 -99827190 - L1MA3 LINE L1 0 6305 6217 2087 128 7 7 chr10 40489575 40489872 -99826893 + AluSg SINE Alu 1 297 -13 6695 83 23 19 chr10 40489872 40490752 -99826013 - L1MA3 LINE L1 -88 6217 5331 * 10848 162 12 7 chr10 40490749 40492485 -99824280 - L1M1 LINE L1 -5807 1758 14 1533 266 46 14 chr10 40492720 40493239 -99823526 - L1ME3A LINE L1 -260 5910 5375 2409 124 40 26 chr10 40493250 40493628 -99823137 + MSTC LTR MaLR 1 383 -45 841 171 42 10 chr10 40493646 40493839 -99822926 - L1MDa LINE L1 -3530 3010 2812 * 2325 193 95 83 chr10 40493836 40494131 -99822634 - L1MDa LINE L1 -4000 2540 2250 2087 119 3 3 chr10 40494131 40494455 -99822310 - AluSx SINE Alu 0 324 1 2325 193 95 83 chr10 40494455 40494992 -99821773 - L1MDa LINE L1 -4290 2250 1697 303 184 0 6 chr10 40494997 40495072 -99821693 + MLT2B1 LTR ERVL 443 520 0 1322 257 169 35 chr10 40495078 40495701 -99821064 + L1MC4a LINE L1 6784 7489 -319 404 256 133 15 chr10 40495704 40495899 -99820866 + L1MC4 LINE L1 7759 7976 -66 763 265 51 8 chr10 40496043 40496277 -99820488 + MIR SINE MIR 18 261 -1 2683 73 35 0 chr10 40496625 40496968 -99819797 + THE1A LTR MaLR 1 355 0 472 255 145 30 chr10 40497428 40497783 -99818982 - MLT1H LTR MaLR -2 547 125 270 342 29 23 chr10 40498137 40498444 -99818321 + L1ME3A LINE L1 4978 5286 -860 666 284 41 5 chr10 40498454 40498648 -99818117 + MER63A DNA MER1_type 4 204 -6 1022 288 92 42 chr10 40498649 40498712 -99818053 + L1ME3A LINE L1 5285 5343 -827 2182 141 79 12 chr10 40498712 40499117 -99817648 - MSTB1 LTR MaLR 0 432 1 1022 288 92 42 chr10 40499117 40499720 -99817045 + L1ME3A LINE L1 5343 5984 -186 444 19 0 0 chr10 40500321 40500374 -99816391 + (CA)n Simple_repeat Simple_repeat 2 54 0 1097 183 18 14 chr10 40501062 40501281 -99815484 - AluJb SINE Alu -8 304 85 1009 282 120 30 chr10 40501301 40501833 -99814932 + L1MC4a LINE L1 5316 5895 -1913 862 221 89 70 chr10 40502240 40502656 -99814109 + MLT1H1 LTR MaLR 96 368 -6 1014 141 82 5 chr10 40503005 40503189 -99813576 + L1PB1 LINE L1 3 200 -6663 3274 113 58 16 chr10 40503189 40503693 -99813072 + L1PB1 LINE L1 634 1158 -5705 992 94 0 8 chr10 40503708 40503835 -99812930 - AluSp/q SINE Alu -20 293 168 2554 92 129 1 chr10 40503836 40504284 -99812481 + L1PB1 LINE L1 2521 3025 -3837 550 97 0 0 chr10 40504285 40504357 -99812408 - L1PBa LINE L1 -4385 2478 2407 4624 60 15 32 chr10 40504358 40505407 -99811358 - MER11A LTR ERVK 0 1266 1 1820 87 64 0 chr10 40505407 40505673 -99811092 - L1PBa LINE L1 -4453 2410 2128 * 13612 172 9 29 chr10 40505672 40509533 -99807232 + L1PB1 LINE L1 3032 6823 -44 656 243 53 21 chr10 40510032 40510221 -99806544 + MER58A DNA MER1_type 18 212 -12 2060 144 0 0 chr10 40510380 40510671 -99806094 + AluSx SINE Alu 1 291 -21 230 219 36 95 chr10 40510673 40510810 -99805955 + L1ME4a LINE L1 5255 5383 -2425 308 319 76 29 chr10 40510882 40511264 -99805501 + L1ME4a LINE L1 5492 5891 -230 216 171 0 0 chr10 40511309 40511344 -99805421 + (TG)n Simple_repeat Simple_repeat 2 36 0 685 276 134 30 chr10 40511407 40511868 -99804897 - MLT1J LTR MaLR 0 511 3 832 156 16 0 chr10 40512123 40512251 -99804514 + AluJb SINE Alu 3 132 -180 1145 233 66 3 chr10 40512517 40512804 -99803961 + L1MDb LINE L1 18 322 -6087 1791 188 53 53 chr10 40512804 40513309 -99803456 - MLT1D LTR MaLR 0 505 1 1182 226 22 194 chr10 40513311 40514081 -99802684 - MLT1D-int LTR MaLR -2 1369 732 * 3327 187 81 45 chr10 40514079 40514925 -99801840 + L1MDb LINE L1 324 1295 -5111 2102 86 54 4 chr10 40514925 40515204 -99801561 + AluY SINE Alu 2 294 -17 3327 187 81 45 chr10 40515204 40515611 -99801154 + L1MDb LINE L1 1295 1686 -4720 1595 206 34 6 chr10 40515698 40516095 -99800670 - MLT2B1 LTR ERVL -59 456 3 521 222 169 29 chr10 40516098 40516305 -99800460 - L1MC4a LINE L1 -1027 6781 6546 1487 199 14 7 chr10 40516305 40516592 -99800173 + LOR1b LTR ERV1 65 353 -108 458 81 189 0 chr10 40516580 40516654 -99800111 + LOR1a LTR ERV1 410 497 0 * 429 294 107 56 chr10 40516781 40517638 -99799127 - L1MEc LINE L1 -2416 3799 2862 2289 96 3 0 chr10 40517638 40517929 -99798836 + AluSc SINE Alu 1 292 -17 429 294 107 56 chr10 40517929 40518272 -99798493 - L1MEc LINE L1 -3353 2862 2538 237 226 16 0 chr10 40518380 40518442 -99798323 + HsTC2 DNA Tc2 2 64 -1834 334 222 100 11 chr10 40518444 40518534 -99798231 + L1MB1 LINE L1 6008 6105 -63 359 191 0 0 chr10 40518534 40518597 -99798168 + AluJ/FRAM SINE Alu 226 288 -14 321 178 27 0 chr10 40518614 40518687 -99798078 + L1MB1 LINE L1 6093 6167 -1 847 221 29 5 chr10 40518725 40518929 -99797836 + HsTC2 DNA Tc2 93 301 -1597 * 2683 218 93 30 chr10 40518923 40519343 -99797422 + HsTC2 DNA Tc2 146 538 -1362 2387 107 0 0 chr10 40519343 40519652 -99797113 + AluSx SINE Alu 1 309 -3 2683 218 93 30 chr10 40519652 40520099 -99796666 + HsTC2 DNA Tc2 538 1653 -247 1910 147 0 7 chr10 40520146 40520425 -99796340 - AluSx SINE Alu -15 297 21 356 256 41 20 chr10 40520430 40520625 -99796140 - L1MEc LINE L1 -3866 2349 2180 588 302 98 23 chr10 40521082 40521595 -99795170 - HAL1 LINE L1 -849 1658 1108 869 262 172 11 chr10 40521640 40522006 -99794759 - L1MC4a LINE L1 -2056 5752 5328 764 284 53 82 chr10 40522234 40522700 -99794065 - L1MC4a LINE L1 -807 5339 4914 2314 89 3 3 chr10 40522700 40523004 -99793761 + AluY SINE Alu 3 306 -5 764 284 53 82 chr10 40523004 40523499 -99793266 - L1MC4a LINE L1 -1232 4914 4406 1733 179 0 26 chr10 40523528 40523836 -99792929 - AluJo SINE Alu -10 302 3 3719 180 41 25 chr10 40523907 40524711 -99792054 - L1MB7 LINE L1 -85 6099 5283 674 354 80 31 chr10 40524907 40525499 -99791266 - L1MC4a LINE L1 -2024 4122 3483 2025 171 118 12 chr10 40525499 40525921 -99790844 - MLT1C LTR MaLR 0 467 1 674 354 80 31 chr10 40525921 40526090 -99790675 - L1MC4a LINE L1 -2663 3483 3324 584 249 43 80 chr10 40526370 40526695 -99790070 - L1ME1 LINE L1 -16 6150 5838 201 217 29 87 chr10 40530676 40530745 -99786020 - L2 LINE L2 -1 3271 3207 282 225 80 123 chr10 40532018 40532156 -99784609 - MIR SINE MIR -81 181 50 255 320 55 32 chr10 40532280 40532499 -99784266 + L1M4 LINE L1 4943 5166 -980 227 264 0 0 chr10 40533062 40533115 -99783650 + (TG)n Simple_repeat Simple_repeat 2 54 0 3774 116 11 20 chr10 40533691 40534244 -99782521 + LTR14 LTR ERVK 1 548 0 382 239 255 8 chr10 40535888 40536139 -99780626 - L2 LINE L2 -176 3137 2825 994 257 44 42 chr10 40536457 40536858 -99779907 + L1MD1 LINE L1 338 1047 -5493 * 9597 210 51 54 chr10 40536853 40539917 -99776848 + L1MD1 LINE L1 1345 4418 -2218 697 176 7 0 chr10 40539917 40540059 -99776706 + L1MB4 LINE L1 6037 6179 -1 9597 210 51 54 chr10 40540059 40541330 -99775435 + L1MD1 LINE L1 4418 5642 -994 1746 137 0 4 chr10 40541330 40541600 -99775165 + AluSg SINE Alu 35 303 -7 9597 210 51 54 chr10 40541600 40541960 -99774805 + L1MD1 LINE L1 5642 6002 -634 * 36977 64 4 3 chr10 40541959 40547504 -99769261 + L1PA5 LINE L1 603 6152 -2 1599 164 40 16 chr10 40547629 40547933 -99768832 + AluSx SINE Alu 1 311 -1 3119 144 13 105 chr10 40547934 40548637 -99768128 + L1MD1 LINE L1 5999 6636 0 766 292 51 48 chr10 40548743 40549137 -99767628 - HAL1 LINE L1 -7 2500 2106 394 315 142 23 chr10 40549158 40549552 -99767213 - L2 LINE L2 -1 3312 2872 1351 208 64 9 chr10 40551057 40551403 -99765362 - MLT1A1 LTR MaLR 0 365 1 201 279 81 0 chr10 40551974 40552085 -99764680 - L2 LINE L2 -825 2489 2370 296 152 0 0 chr10 40554357 40554403 -99762362 - MLT1L LTR MaLR -221 394 349 472 302 63 31 chr10 40554854 40555076 -99761689 - L3 LINE CR1 -38 1539 1311 2452 271 69 31 chr10 40555121 40556292 -99760473 + L1MEc LINE L1 974 2189 -4207 3147 236 138 28 chr10 40556318 40556641 -99760124 + L1M4b LINE L1 17 303 -6556 1596 249 64 19 chr10 40556641 40557122 -99759643 + MLT1D LTR MaLR 3 505 0 3147 236 138 28 chr10 40557122 40557720 -99759045 + L1M4b LINE L1 303 1039 -5820 443 279 105 22 chr10 40557754 40558020 -99758745 - L1M4 LINE L1 -1076 5070 4785 497 349 49 29 chr10 40558063 40558677 -99758088 - L1MEd LINE L1 -5483 636 11 1894 133 10 26 chr10 40559009 40559311 -99757454 + AluJb SINE Alu 1 297 -15 4611 212 74 18 chr10 40562143 40563746 -99753019 - L1MD1 LINE L1 0 6242 4538 4764 238 53 6 chr10 40563748 40565145 -99751620 - L1MD1 LINE L1 -1702 4444 2983 243 185 0 15 chr10 40565433 40565498 -99751267 - L1ME4a LINE L1 -9 6112 6049 2397 122 0 21 chr10 40565582 40565958 -99750807 - L1PB1 LINE L1 -2 6149 5782 315 0 0 0 chr10 40565993 40566028 -99750737 + (CA)n Simple_repeat Simple_repeat 2 36 0 3836 117 1 13 chr10 40566034 40566222 -99750543 - L1PB1 LINE L1 -360 5791 5602 4743 166 52 50 chr10 40566222 40567291 -99749474 + MER11C LTR ERVK 1 1071 0 3836 117 1 13 chr10 40567291 40567863 -99748902 - L1PB1 LINE L1 -549 5602 5039 444 245 180 12 chr10 40567875 40568120 -99748645 - L1ME4a LINE L1 -241 5880 5595 38 0 0 0 chr10 40570615 40570653 -99746112 + AT_rich Low_complexity Low_complexity 1 38 0 802 180 267 8 chr10 40570708 40570951 -99745814 - L1MA9 LINE L1 -74 6238 5934 1994 132 0 3 chr10 40570951 40571255 -99745510 + AluSp SINE Alu 1 303 -10 802 180 267 8 chr10 40571255 40571267 -99745498 - L1MA9 LINE L1 -378 5934 5926 8936 204 30 50 chr10 40571281 40571670 -99745095 + L1 LINE L1 2546 2941 -3205 2270 90 3 0 chr10 40571670 40571971 -99744794 + AluSq SINE Alu 1 302 -11 8936 204 30 50 chr10 40571971 40574506 -99742259 + L1 LINE L1 2941 5336 -810 2241 64 3 32 chr10 40575257 40575569 -99741196 - AluY SINE Alu 0 311 9 967 235 66 85 chr10 40576067 40576848 -99739917 + HSREP522 Satellite telomeric 1 765 -267 1997 133 0 3 chr10 40578025 40578319 -99738446 - AluSx SINE Alu -19 293 1 376 317 7 0 chr10 40578339 40578481 -99738284 + CT-rich Low_complexity Low_complexity 2 144 0 1314 176 86 8 chr10 40579710 40579966 -99736799 + LOR1-int LTR ERV1 2079 2354 -3592 829 185 36 5 chr10 40579965 40580160 -99736605 + LOR1-int LTR ERV1 1839 2039 -6081 * 2512 154 52 4 chr10 40580174 40580636 -99736129 + LOR1-int LTR ERV1 2745 3228 -2718 357 204 92 71 chr10 40580640 40580836 -99735929 + LOR1-int LTR ERV1 3329 3528 -2418 264 333 0 0 chr10 40581106 40581190 -99735575 + L1MC/D LINE L1 5697 5780 -2028 21 0 0 0 chr10 40582221 40582242 -99734523 + AT_rich Low_complexity Low_complexity 1 21 0 940 248 28 0 chr10 40582454 40582672 -99734093 - MER58A DNA MER1_type 0 224 1 2148 177 40 113 chr10 40582721 40583350 -99733415 - LTR9 LTR ERV1 0 612 30 2070 134 0 13 chr10 40583350 40583655 -99733110 - AluSx SINE Alu -11 301 1 2148 177 40 113 chr10 40583655 40583670 -99733095 - LTR9 LTR ERV1 -582 30 15 1827 149 3 44 chr10 40583794 40583938 -99732827 + AluSx SINE Alu 1 149 -163 2045 86 0 0 chr10 40583938 40584194 -99732571 + AluSg SINE Alu 43 298 -12 1827 149 3 44 chr10 40584194 40584364 -99732401 + AluSx SINE Alu 149 302 -10 892 176 45 11 chr10 40584811 40584987 -99731778 - MLT1A2 LTR MaLR -4 370 189 268 222 13 12 chr10 40585007 40585257 -99731508 + GA-rich Low_complexity Low_complexity 1 250 0 736 162 45 39 chr10 40585288 40585442 -99731323 - MLT1A2 LTR MaLR -215 159 5 1234 208 20 0 chr10 40585473 40585728 -99731037 + MLT1B LTR MaLR 9 268 -122 4448 105 126 146 chr10 40585728 40587238 -99729527 + pTR5 LTR ERV1 743 2438 0 624 147 18 0 chr10 40587242 40587351 -99729414 + MLT1B LTR MaLR 266 376 -14 2207 109 0 0 chr10 40588190 40588484 -99728281 + AluSq SINE Alu 1 294 -19 4315 179 42 20 chr10 40588938 40589839 -99726926 - MER49 LTR ERV1 -2 921 1 1786 140 57 0 chr10 40590734 40591013 -99725752 - AluJb SINE Alu -17 295 1 2317 88 0 26 chr10 40591021 40591327 -99725438 - AluSx SINE Alu -14 298 1 38 0 0 0 chr10 40591327 40591365 -99725400 + AT_rich Low_complexity Low_complexity 1 38 0 1419 184 15 0 chr10 40591365 40591636 -99725129 - L1PA16 LINE L1 -14 6152 5878 205 302 56 79 chr10 40591636 40591762 -99725003 - L2 LINE L2 -8 3264 3142 1342 139 4 62 chr10 40594465 40594537 -99722228 - Tigger5 DNA MER2_type 0 2323 2248 1913 145 26 0 chr10 40594537 40594841 -99721924 + AluSx SINE Alu 1 312 0 1342 139 4 62 chr10 40594841 40595012 -99721753 - Tigger5 DNA MER2_type -75 2248 2094 1745 173 6 43 chr10 40596078 40596401 -99720364 - AluJo SINE Alu -1 311 1 712 183 85 12 chr10 40597121 40597285 -99719480 + MLT1B LTR MaLR 2 177 -213 522 167 48 24 chr10 40597330 40597498 -99719267 + (TCTCTG)n Simple_repeat Simple_repeat 3 174 0 659 202 105 20 chr10 40597501 40597685 -99719080 + MLT1B LTR MaLR 204 374 -16 268 324 112 0 chr10 40599087 40599257 -99717508 + MIR SINE MIR 74 262 0 257 61 0 0 chr10 40599987 40600020 -99716745 - L2 LINE L2 -19 3294 3262 1959 180 30 22 chr10 40600585 40600985 -99715780 - MER57A LTR ERV1 0 403 1 2230 103 0 42 chr10 40601410 40601721 -99715044 - AluSx SINE Alu -14 298 1 461 175 66 81 chr10 40602229 40602440 -99714325 + Charlie4a DNA MER1_type 207 414 -94 382 193 104 15 chr10 40602456 40602591 -99714174 + Charlie4a DNA MER1_type 356 502 -6 197 191 24 0 chr10 40602689 40602731 -99714034 + L2 LINE L2 3265 3307 -6 1440 193 57 33 chr10 40602968 40603336 -99713429 + LTR40b LTR ERVL 84 460 -2 1615 200 29 0 chr10 40604165 40604445 -99712320 - AluJo SINE Alu -24 288 1 720 219 65 145 chr10 40604447 40604625 -99712140 - L1ME LINE L1 -5165 905 714 2355 79 0 7 chr10 40604625 40604916 -99711849 - AluSg SINE Alu -21 289 1 720 219 65 145 chr10 40604916 40604941 -99711824 - L1ME LINE L1 -5356 714 689 2164 102 7 7 chr10 40604941 40605236 -99711529 + AluSp SINE Alu 1 295 -18 720 219 65 145 chr10 40605236 40605279 -99711486 - L1ME LINE L1 -5381 689 644 2087 127 10 19 chr10 40605279 40605587 -99711178 + AluSq SINE Alu 1 305 -8 720 219 65 145 chr10 40605587 40605995 -99710770 - L1ME LINE L1 -5426 644 301 3376 231 117 33 chr10 40606046 40607169 -99709596 - L1MC4 LINE L1 -299 7743 6527 1781 164 27 7 chr10 40608751 40609049 -99707716 - AluJb SINE Alu -8 304 1 2043 146 0 3 chr10 40609080 40609374 -99707391 + AluSg SINE Alu 1 293 -17 312 237 44 53 chr10 40609698 40609812 -99706953 - MLT1K LTR MaLR -323 265 153 231 290 32 0 chr10 40609930 40609992 -99706773 + L1 LINE L1 4911 4974 -1172 344 256 202 42 chr10 40610301 40610469 -99706296 - MLT1L LTR MaLR 0 615 421 775 266 40 0 chr10 40610789 40611011 -99705754 - MIR SINE MIR -21 241 11 336 269 0 0 chr10 40611013 40611091 -99705674 + MER58 DNA MER1_type 1 78 -137 25 0 0 0 chr10 40611457 40611482 -99705283 + AT_rich Low_complexity Low_complexity 1 25 0 2302 152 11 48 chr10 40611609 40612043 -99704722 - LTR3 LTR ERVK -10 422 5 6502 119 51 16 chr10 40612219 40613253 -99703512 + MER11C LTR ERVK 1 1071 0 2058 116 27 7 chr10 40613488 40613781 -99702984 - AluSx SINE Alu -11 301 3 1143 166 21 0 chr10 40613970 40614163 -99702602 + Tigger6 DNA MER2_type 1 197 -886 44285 45 4 3 chr10 40614165 40620314 -99696451 + L1PA4 LINE L1 2 6155 0 826 220 11 11 chr10 40620323 40620500 -99696265 + Tigger6 DNA MER2_type 182 358 -1239 2254 108 7 0 chr10 40620511 40620806 -99695959 + AluSg SINE Alu 1 297 -13 250 306 0 0 chr10 40620819 40620881 -99695884 + Tigger6 DNA MER2_type 1536 1597 0 1841 108 8 0 chr10 40621531 40621780 -99694985 + AluSx SINE Alu 41 291 -21 893 156 54 6 chr10 40621879 40622046 -99694719 + L1M3 LINE L1 5446 5620 -563 1637 165 71 43 chr10 40622051 40622403 -99694362 - MLT1B LTR MaLR -3 387 26 860 176 77 12 chr10 40622390 40622515 -99694250 + MLT2C1 LTR ERVL 217 357 -40 * 210 118 0 0 chr10 40622515 40622549 -99694216 + (CA)n Simple_repeat Simple_repeat 2 35 0 860 176 77 12 chr10 40622549 40622593 -99694172 + MLT2C1 LTR ERVL 357 397 0 376 211 56 106 chr10 40622653 40622833 -99693932 + MLT1D LTR MaLR 335 505 0 1955 139 37 7 chr10 40623301 40623596 -99693169 - AluSx SINE Alu -8 304 1 233 280 10 5 chr10 40624448 40624538 -99692227 + MIR SINE MIR 54 144 -64 240 267 95 52 chr10 40625369 40625485 -99691280 + MIR SINE MIR 77 197 -65 7790 29 17 0 chr10 40626062 40627225 -99689540 - L1PA2 LINE L1 -1 6154 4985 15523 33 2 1 chr10 40627225 40629066 -99687699 + L1PA2 LINE L1 3171 5014 -1132 255 203 176 0 chr10 40629580 40629654 -99687111 + MLT1C LTR MaLR 6 92 -375 286 122 0 0 chr10 40629908 40629949 -99686816 - MER70-int LTR ERVL -2428 2595 2555 852 201 34 95 chr10 40630735 40630999 -99685766 + MLT1C-int LTR MaLR 1123 1370 -1 2068 166 30 38 chr10 40631007 40631478 -99685287 + MLT1C LTR MaLR 1 467 0 978 238 23 4 chr10 40631855 40632111 -99684654 + L1M4 LINE L1 4951 5211 -935 2297 92 7 0 chr10 40632348 40632640 -99684125 - AluSp SINE Alu -19 294 1 451 326 50 16 chr10 40632778 40633036 -99683729 + ERVL LTR ERVL 2064 2330 -3434 836 322 106 56 chr10 40633256 40634491 -99682274 + ERVL LTR ERVL 2698 4002 -1483 382 363 20 0 chr10 40634660 40634864 -99681901 + ERVL LTR ERVL 4203 4410 -1244 321 176 12 35 chr10 40635375 40635460 -99681305 - L1M4 LINE L1 -978 5168 5086 234 221 44 0 chr10 40635456 40635524 -99681241 + L1MB7 LINE L1 4677 4747 -1399 * 2141 129 0 0 chr10 40635524 40635818 -99680947 + AluY SINE Alu 1 294 -17 24 53 0 0 chr10 40635818 40635856 -99680909 + AT_rich Low_complexity Low_complexity 1 38 0 326 222 33 0 chr10 40635859 40635949 -99680816 + L1MB7 LINE L1 4741 4833 -1313 207 0 0 0 chr10 40636034 40636057 -99680708 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1270 215 96 45 chr10 40636058 40636513 -99680252 + L1MB7 LINE L1 4845 5275 -909 2248 103 23 0 chr10 40636513 40636813 -99679952 + AluSq SINE Alu 1 307 -6 1270 215 96 45 chr10 40636813 40636865 -99679900 + L1MB7 LINE L1 5275 5323 -861 2134 138 0 0 chr10 40636865 40637162 -99679603 + AluSx SINE Alu 1 297 -15 1270 215 96 45 chr10 40637162 40637399 -99679366 + L1MB7 LINE L1 5323 5939 -245 1395 157 0 0 chr10 40637403 40637613 -99679152 - AluSg/x SINE Alu -17 295 86 501 234 101 10 chr10 40637615 40637824 -99678941 + L1MB7 LINE L1 5941 6168 -16 2329 74 0 32 chr10 40638506 40638817 -99677948 + AluY SINE Alu 1 301 -10 1595 179 17 30 chr10 40638825 40638957 -99677808 + AluJo SINE Alu 1 133 -179 2359 77 3 22 chr10 40638957 40639235 -99677530 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr10 40639235 40639262 -99677503 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2359 77 3 22 chr10 40639262 40639296 -99677469 + AluSc SINE Alu 274 307 -2 1595 179 17 30 chr10 40639296 40639465 -99677300 + AluJo SINE Alu 133 298 -14 2324 77 40 3 chr10 40639569 40639868 -99676897 - AluY SINE Alu -1 310 1 343 180 0 0 chr10 40640255 40640316 -99676449 + L1MD3 LINE L1 6877 6937 -1058 1016 262 162 27 chr10 40640353 40640804 -99675961 - REP3 LTR ERV -50 512 1 491 213 140 0 chr10 40640804 40640968 -99675797 + L1MC3 LINE L1 6911 7097 -688 330 259 0 12 chr10 40640978 40641059 -99675706 + MLT1F1 LTR MaLR 46 125 -442 2063 203 91 15 chr10 40641059 40641578 -99675187 + L1MD3 LINE L1 7404 7969 -26 2214 93 0 10 chr10 40641578 40641869 -99674896 + AluSg SINE Alu 1 288 -22 2063 203 91 15 chr10 40641869 40641897 -99674868 + L1MD3 LINE L1 7969 7993 -2 1830 159 14 10 chr10 40644749 40645044 -99671721 - AluSx SINE Alu -15 297 2 650 181 39 8 chr10 40645554 40645681 -99671084 - MIR SINE MIR -67 195 65 3901 173 50 21 chr10 40645781 40646970 -99669795 + L1MB7 LINE L1 4947 6168 -16 389 243 35 28 chr10 40646981 40647125 -99669640 + L1MC4a LINE L1 5814 5958 -1850 21 104 0 0 chr10 40647738 40647815 -99668950 + AT_rich Low_complexity Low_complexity 1 77 0 1808 108 0 0 chr10 40647866 40648098 -99668667 + AluSc SINE Alu 62 293 -16 338 312 95 11 chr10 40648234 40648423 -99668342 + L1ME LINE L1 4811 5015 -1131 901 160 0 14 chr10 40648452 40648596 -99668169 + FLAM_C SINE Alu 1 142 -1 4559 103 0 2 chr10 40648647 40649278 -99667487 - L1PA15 LINE L1 -13 6152 5523 2370 103 0 0 chr10 40649286 40649588 -99667177 - AluSx SINE Alu -10 302 1 2068 124 0 0 chr10 40649622 40649912 -99666853 + AluY SINE Alu 2 291 -20 293 274 98 13 chr10 40650147 40650304 -99666461 + L1ME LINE L1 5360 5528 -638 1695 169 20 23 chr10 40651349 40651650 -99665115 - AluJo SINE Alu -12 300 1 356 295 74 25 chr10 40652495 40652617 -99664148 + MIR3 SINE MIR 3 130 -78 731 100 0 17 chr10 40652617 40652737 -99664028 - AluJb SINE Alu 0 312 195 22 56 0 0 chr10 40652900 40652936 -99663829 + AT_rich Low_complexity Low_complexity 1 36 0 1687 152 0 28 chr10 40652943 40653268 -99663497 - AluJb SINE Alu 0 317 1 300 240 13 0 chr10 40653791 40653866 -99662899 + L1M4 LINE L1 4866 4941 -1205 227 232 73 12 chr10 40653862 40653944 -99662821 + L1M4 LINE L1 2300 2386 -3760 * 819 195 129 9 chr10 40653955 40654165 -99662600 + MER93b LTR ERV1 113 347 -26 249 222 0 19 chr10 40654351 40654405 -99662360 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 472 191 42 1 chr10 40654456 40654572 -99662193 - L1ME LINE L1 -452 5718 5598 2739 169 12 46 chr10 40654581 40655510 -99661255 - L1M3 LINE L1 -374 6045 5151 1187 118 0 0 chr10 40655510 40655671 -99661094 - AluSg/x SINE Alu -12 298 138 7222 199 84 96 chr10 40655672 40656798 -99659967 - L1M3 LINE L1 -1226 5156 4018 2069 144 0 22 chr10 40656798 40657111 -99659654 - AluSx SINE Alu -6 306 1 7222 199 84 96 chr10 40657111 40657793 -99658972 - L1M3 LINE L1 -2364 4018 3330 2071 161 0 0 chr10 40657793 40658104 -99658661 - AluSx SINE Alu -1 311 1 7222 199 84 96 chr10 40658104 40659009 -99657756 - L1M3 LINE L1 -3052 3330 2416 14598 143 39 30 chr10 40659009 40659952 -99656813 + Tigger2 DNA MER2_type 1 934 -1784 196 51 26 26 chr10 40659952 40659991 -99656774 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 14598 143 39 30 chr10 40659991 40660079 -99656686 + Tigger2 DNA MER2_type 934 1020 -1698 1748 169 6 44 chr10 40660079 40660399 -99656366 + AluJb SINE Alu 1 308 -4 14598 143 39 30 chr10 40660399 40660485 -99656280 + Tigger2 DNA MER2_type 1020 1104 -1614 2092 134 0 3 chr10 40660485 40660783 -99655982 + AluJb SINE Alu 6 302 -10 14598 143 39 30 chr10 40660783 40662356 -99654409 + Tigger2 DNA MER2_type 1104 2718 0 7222 199 84 96 chr10 40662356 40663580 -99653185 - L1M3 LINE L1 -3966 2416 1297 2172 113 10 16 chr10 40663580 40663890 -99652875 - AluSx SINE Alu -4 308 1 7222 199 84 96 chr10 40663890 40665018 -99651747 - L1M3 LINE L1 -5085 1297 157 2913 249 48 19 chr10 40665008 40665880 -99650885 - L1M4b LINE L1 -5873 986 90 * 21 0 0 0 chr10 40665893 40665914 -99650851 + AT_rich Low_complexity Low_complexity 1 21 0 2386 82 0 19 chr10 40666425 40666742 -99650023 - AluY SINE Alu 0 311 1 401 230 0 0 chr10 40669567 40669641 -99647124 - L1M4b LINE L1 -6775 84 11 234 226 65 16 chr10 40669650 40669712 -99647053 + L2 LINE L2 3167 3231 -82 596 297 43 5 chr10 40669791 40669976 -99646789 - MIR SINE MIR -70 192 1 28 29 0 0 chr10 40671085 40671120 -99645645 + AT_rich Low_complexity Low_complexity 1 35 0 1452 140 9 0 chr10 40671177 40671405 -99645360 + MER30 DNA MER1_type 1 230 0 2512 81 0 0 chr10 40671580 40671889 -99644876 + AluSc SINE Alu 1 309 0 2176 136 0 0 chr10 40672089 40672398 -99644367 - AluSx SINE Alu -1 311 3 1281 223 130 30 chr10 40672509 40672971 -99643794 - MLT2B2 LTR ERVL -7 508 1 2402 76 0 22 chr10 40673200 40673514 -99643251 - AluY SINE Alu -4 307 1 1850 179 0 7 chr10 40673966 40674267 -99642498 - AluJb SINE Alu -13 299 1 236 250 46 40 chr10 40674466 40674618 -99642147 + L1ME LINE L1 5671 5823 -298 226 300 73 0 chr10 40676583 40676693 -99640072 - MER112 DNA MER1_type -45 215 98 302 209 229 46 chr10 40676739 40676892 -99639873 + L2 LINE L2 2964 3144 -169 435 270 135 30 chr10 40677744 40677944 -99638821 + LTR33 LTR ERVL 301 521 0 280 273 0 0 chr10 40679128 40679137 -99637628 + (TA)n Simple_repeat Simple_repeat 2 10 -68 1789 160 117 10 chr10 40679137 40679530 -99637235 + MER63B DNA MER1_type 1 435 -1 280 273 0 0 chr10 40679530 40679597 -99637168 + (TA)n Simple_repeat Simple_repeat 9 78 0 197 65 32 0 chr10 40682675 40682706 -99634059 + (TAA)n Simple_repeat Simple_repeat 1 32 0 180 111 0 0 chr10 40683553 40683580 -99633185 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 223 271 7 21 chr10 40684119 40684204 -99632561 + GA-rich Low_complexity Low_complexity 2 138 0 491 268 0 0 chr10 40684206 40684318 -99632447 + MER58C DNA MER1_type 104 215 0 1466 299 89 30 chr10 40684318 40685228 -99631537 + L2 LINE L2 2176 3150 -163 354 143 0 0 chr10 40685272 40685335 -99631430 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 114 0 4 chr10 40685627 40685939 -99630826 - AluSc SINE Alu 0 311 1 303 348 9 17 chr10 40686791 40686906 -99629859 - L2 LINE L2 -23 3249 3136 281 295 0 13 chr10 40687267 40687416 -99629349 + L1MC/D LINE L1 979 1125 -5247 1767 256 46 5 chr10 40687434 40687875 -99628890 + MER68 LTR ERV1 1 532 -73 385 200 12 12 chr10 40687878 40687958 -99628807 + L1MC3 LINE L1 6669 6748 -1037 291 93 0 0 chr10 40688027 40688070 -99628695 + (CA)n Simple_repeat Simple_repeat 2 44 0 296 267 0 0 chr10 40688072 40688158 -99628607 + L1MC/D LINE L1 1041 1126 -5258 * 1670 231 54 32 chr10 40688136 40688724 -99628041 + L1MC/D LINE L1 2654 3254 -3128 1472 208 57 6 chr10 40688697 40689153 -99627612 + L1MC/D LINE L1 5356 5841 -743 * 1168 131 17 0 chr10 40689157 40689333 -99627432 + AluSg/x SINE Alu 131 309 -3 794 178 89 23 chr10 40689333 40689547 -99627218 + L1MC3 LINE L1 6756 6983 -802 3950 141 108 9 chr10 40689976 40690733 -99626032 + L1MC3 LINE L1 6945 7776 -9 1311 278 96 65 chr10 40690779 40691682 -99625083 + L1M4 LINE L1 3 933 -5609 2070 92 75 20 chr10 40691687 40691980 -99624785 + AluSc SINE Alu 1 309 0 1752 247 91 23 chr10 40691980 40692663 -99624102 + L1M4 LINE L1 981 1709 -4833 1779 226 193 26 chr10 40692684 40693408 -99623357 + L1M4 LINE L1 1803 2647 -3999 372 136 34 51 chr10 40693411 40693529 -99623236 + CT-rich Low_complexity Low_complexity 5 120 0 1653 179 13 22 chr10 40693531 40693844 -99622921 - AluJb SINE Alu -2 310 1 341 152 0 15 chr10 40693846 40693912 -99622853 + L1M4 LINE L1 2642 2706 -3940 370 303 130 30 chr10 40694032 40694263 -99622502 + L1MEc LINE L1 1541 1794 -4602 325 222 74 22 chr10 40694374 40694509 -99622256 + L1ME LINE L1 5430 5571 -591 1249 229 8 16 chr10 40694515 40694773 -99621992 + LTR39 LTR ERV1 528 783 0 546 200 246 73 chr10 40694775 40694878 -99621887 + L1MC5 LINE L1 7144 7228 -733 1546 181 9 48 chr10 40694878 40695193 -99621572 + AluJo SINE Alu 1 303 -9 546 200 246 73 chr10 40695193 40695553 -99621212 + L1MC5 LINE L1 7228 7687 -274 910 166 57 0 chr10 40695577 40695734 -99621031 - AluSg/x SINE Alu -27 285 120 517 136 12 0 chr10 40695734 40695815 -99620950 - AluS SINE Alu -6 304 223 783 235 47 13 chr10 40695943 40696177 -99620588 + L1MC4 LINE L1 7742 7983 -59 516 224 128 32 chr10 40696211 40696430 -99620335 + L1MC5 LINE L1 7692 7931 -30 1950 125 7 26 chr10 40696515 40696820 -99619945 + AluSx SINE Alu 1 299 -13 2120 113 3 13 chr10 40696828 40697130 -99619635 + AluSx SINE Alu 1 299 -13 285 318 75 16 chr10 40697423 40697678 -99619087 + HAL1 LINE L1 811 1080 -1427 857 214 22 56 chr10 40697679 40697857 -99618908 + FRAM SINE Alu 1 172 -4 2080 91 7 20 chr10 40697926 40698223 -99618542 + AluY SINE Alu 1 293 -18 2120 127 0 7 chr10 40698317 40698609 -99618156 + AluSg SINE Alu 1 290 -20 2313 227 41 34 chr10 40698922 40699630 -99617135 + L1MD2 LINE L1 4590 5302 -844 3215 129 42 2 chr10 40699636 40700144 -99616621 + MER34B LTR ERV1 1 510 -55 1585 171 91 86 chr10 40700181 40700492 -99616273 + L1MD2 LINE L1 5330 5638 -721 2378 88 3 0 chr10 40700492 40700787 -99615978 + AluSp SINE Alu 1 296 -17 1585 171 91 86 chr10 40700787 40701113 -99615652 + L1MD2 LINE L1 5638 6106 -253 316 139 0 0 chr10 40701117 40701160 -99615605 + Alu SINE Alu 240 282 -20 359 149 37 0 chr10 40701164 40701271 -99615494 + (TA)n Simple_repeat Simple_repeat 1 111 0 638 266 119 40 chr10 40701324 40701397 -99615368 + L1MC4a LINE L1 1226 1292 -5104 1995 84 62 7 chr10 40701397 40701671 -99615094 - AluSc SINE Alu -20 289 1 638 266 119 40 chr10 40701671 40701905 -99614860 + L1MC4a LINE L1 1292 1506 -4890 2140 103 0 7 chr10 40701905 40702206 -99614559 - AluSx SINE Alu -13 299 1 638 266 119 40 chr10 40702206 40702596 -99614169 + L1MC4a LINE L1 1506 1979 -4417 279 276 68 45 chr10 40702609 40702873 -99613892 + L1MC4a LINE L1 5041 5310 -905 1158 283 165 9 chr10 40702904 40703431 -99613334 + L1MC4a LINE L1 5365 5973 -1904 257 259 25 12 chr10 40703436 40703517 -99613248 + MER5A DNA MER1_type 28 109 -80 553 214 53 30 chr10 40703701 40703832 -99612933 - MER94 DNA DNA 0 134 1 221 322 58 50 chr10 40705360 40705481 -99611284 + MIR SINE MIR 25 146 -62 225 286 0 0 chr10 40706005 40706068 -99610697 - MIR SINE MIR -81 181 119 384 259 76 15 chr10 40706714 40706845 -99609920 + MIR SINE MIR 111 249 -13 1662 167 60 18 chr10 40707381 40707621 -99609144 - L1MD3 LINE L1 0 7995 7736 6230 63 33 4 chr10 40707621 40708379 -99608386 - LTR17 LTR ERV1 0 780 1 1662 167 60 18 chr10 40708379 40708473 -99608292 - L1MD3 LINE L1 -259 7736 7647 438 151 55 14 chr10 40708485 40708558 -99608207 - AluS SINE Alu -236 77 2 1055 203 37 164 chr10 40708559 40709248 -99607517 + LTR8A LTR ERV1 138 714 -13 836 148 93 38 chr10 40709258 40709391 -99607374 - L1MD3 LINE L1 -402 7593 7446 1053 210 132 88 chr10 40709391 40709777 -99606988 + MER57A LTR ERV1 1 403 0 836 148 93 38 chr10 40709777 40709826 -99606939 - L1MD3 LINE L1 -549 7446 7401 374 191 225 0 chr10 40709836 40709925 -99606840 - MLT1F1 LTR MaLR -458 109 1 579 197 98 0 chr10 40709926 40710058 -99606707 - L1MC4a LINE L1 -581 7227 7083 258 180 40 0 chr10 40710062 40710112 -99606653 - MER4A LTR ERV1 0 664 613 804 167 92 46 chr10 40710115 40710289 -99606476 + AluSg1 SINE Alu 2 183 -126 997 133 0 78 chr10 40710289 40710469 -99606296 - MER4A LTR ERV1 -102 562 397 1990 134 0 3 chr10 40710469 40710785 -99605980 - AluSq SINE Alu 0 315 1 1289 197 38 84 chr10 40710793 40711072 -99605693 - L1M4 LINE L1 -945 5201 4947 2355 85 20 0 chr10 40711072 40711378 -99605387 - AluSq SINE Alu -1 312 1 1289 197 38 84 chr10 40711378 40711525 -99605240 - L1M4 LINE L1 -1199 4947 4795 1640 183 114 17 chr10 40711526 40711839 -99604926 + MSTD LTR MaLR 1 355 -41 2348 163 58 15 chr10 40711839 40712249 -99604516 + MSTA LTR MaLR 1 428 0 1640 183 114 17 chr10 40712249 40712296 -99604469 + MSTD LTR MaLR 355 396 0 2127 209 22 15 chr10 40712302 40712723 -99604042 + MSTD-int LTR MaLR 5 431 -1304 1588 115 0 41 chr10 40712723 40712966 -99603799 - AluSq SINE Alu -15 298 66 2127 209 22 15 chr10 40712966 40713003 -99603762 + MSTD-int LTR MaLR 431 466 -1269 2315 108 0 0 chr10 40713005 40713301 -99603464 - AluSx SINE Alu -16 296 1 2440 92 0 3 chr10 40713301 40713607 -99603158 - AluSg SINE Alu -5 305 1 654 215 96 28 chr10 40713789 40714061 -99602704 + MLT2D LTR ERVL 1 341 -73 694 109 10 0 chr10 40714388 40714482 -99602283 + MSTA LTR MaLR 3 97 -331 2387 43 43 70 chr10 40714482 40714827 -99601938 + LTR2B LTR ERV1 1 336 -154 266 231 77 22 chr10 40715327 40715418 -99601347 - MIR SINE MIR -88 120 25 290 256 427 0 chr10 40716170 40716287 -99600478 - MER5A DNA MER1_type 0 189 23 218 152 0 22 chr10 40716336 40716382 -99600383 + (TA)n Simple_repeat Simple_repeat 1 45 0 245 191 67 56 chr10 40716401 40716490 -99600275 - L1MC4 LINE L1 -1342 6700 6611 2255 102 0 10 chr10 40716675 40716988 -99599777 - AluSg SINE Alu 0 310 1 1401 181 40 0 chr10 40717414 40717691 -99599074 - L1MB5 LINE L1 -8 6664 6377 840 152 94 53 chr10 40717691 40717854 -99598911 - AluJo SINE Alu -15 297 125 4601 189 50 17 chr10 40717859 40719398 -99597367 - L1MB5 LINE L1 -291 6381 4780 2371 104 0 0 chr10 40719398 40719707 -99597058 - AluSc SINE Alu 0 309 1 4601 189 50 17 chr10 40719707 40719807 -99596958 - L1MB5 LINE L1 -1892 4780 4685 767 226 77 39 chr10 40719809 40720043 -99596722 - L1MB5 LINE L1 -5849 693 451 1828 166 12 98 chr10 40720227 40720389 -99596376 + MLT1B LTR MaLR 1 175 -215 2221 150 132 11 chr10 40720389 40720768 -99595997 - MSTA LTR MaLR -3 425 1 1828 166 12 98 chr10 40720768 40721032 -99595733 + MLT1B LTR MaLR 175 390 0 536 286 78 10 chr10 40721038 40721244 -99595521 - L1MB5 LINE L1 -6316 226 7 1959 168 124 24 chr10 40721439 40721898 -99594867 - MLT1D LTR MaLR 0 505 1 298 268 183 0 chr10 40722106 40722248 -99594517 - L1ME LINE L1 -304 5858 5691 1717 146 14 22 chr10 40722280 40722555 -99594210 + AluJo SINE Alu 1 273 -39 253 263 82 82 chr10 40722592 40722631 -99594134 - L1ME LINE L1 -565 5556 5518 2479 79 0 0 chr10 40722631 40722935 -99593830 - AluY SINE Alu -7 304 1 253 263 82 82 chr10 40722935 40723066 -99593699 - L1ME LINE L1 -602 5519 5386 2378 78 3 0 chr10 40723170 40723466 -99593299 - AluSp SINE Alu -15 298 2 180 0 0 0 chr10 40723466 40723486 -99593279 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1942 131 0 17 chr10 40723486 40723639 -99593126 - AluSx SINE Alu -26 286 139 1890 113 0 55 chr10 40723639 40723932 -99592833 - AluSq SINE Alu -14 299 23 1942 131 0 17 chr10 40723932 40724069 -99592696 - AluSx SINE Alu -173 139 1 1260 300 89 43 chr10 40724115 40724843 -99591922 - L1MC4a LINE L1 -1352 6525 5737 2197 104 10 16 chr10 40724843 40725152 -99591613 - AluSx SINE Alu -5 307 1 1260 300 89 43 chr10 40725152 40725425 -99591340 - L1MC4a LINE L1 -2140 5737 5478 2072 108 0 40 chr10 40725450 40725633 -99591132 - AluSx SINE Alu 0 308 119 189 0 0 0 chr10 40725633 40725654 -99591111 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2034 120 3 11 chr10 40725654 40725938 -99590827 - AluSg SINE Alu -28 282 1 2072 108 0 40 chr10 40725938 40726073 -99590692 - AluSx SINE Alu -187 121 1 1690 197 3 7 chr10 40726248 40726547 -99590218 + AluJo SINE Alu 1 298 -14 243 254 30 15 chr10 40726673 40726740 -99590025 + MER5B DNA MER1_type 1 68 -110 252 162 15 73 chr10 40726768 40726836 -99589929 - L1MC4 LINE L1 -504 7538 7475 2205 123 0 0 chr10 40726836 40727137 -99589628 - AluSg SINE Alu -9 301 1 941 278 71 22 chr10 40727312 40727967 -99588798 - L1MC4a LINE L1 -745 5488 4798 1323 210 241 22 chr10 40727973 40728260 -99588505 - MLT1E1 LTR MaLR 0 654 431 2361 77 0 0 chr10 40728260 40728546 -99588219 - AluSg SINE Alu -24 286 1 1323 210 241 22 chr10 40728546 40728719 -99588046 - MLT1E1 LTR MaLR -223 431 93 24 32 0 0 chr10 40728839 40728870 -99587895 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr10 40728882 40728905 -99587860 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 848 156 0 14 chr10 40728913 40729054 -99587711 - AluSg/x SINE Alu -37 273 135 2033 95 53 0 chr10 40729101 40729384 -99587381 - AluSg SINE Alu -12 298 1 1081 254 45 89 chr10 40729384 40729663 -99587102 - L1MC4a LINE L1 -1476 4739 4449 2399 87 0 0 chr10 40729663 40729962 -99586803 - AluY SINE Alu -12 299 1 1081 254 45 89 chr10 40729962 40730038 -99586727 - L1MC4a LINE L1 -1766 4449 4371 2295 103 7 0 chr10 40730038 40730339 -99586426 - AluSp SINE Alu -10 303 1 1081 254 45 89 chr10 40730339 40730352 -99586413 - L1MC4a LINE L1 -1844 4371 4359 2158 113 0 0 chr10 40730352 40730652 -99586113 - AluY SINE Alu -11 300 1 1081 254 45 89 chr10 40730652 40730843 -99585922 - L1MC4a LINE L1 -1856 4359 4203 2470 80 3 0 chr10 40731161 40731461 -99585304 + AluSp SINE Alu 1 301 -12 2277 99 7 3 chr10 40732711 40733014 -99583751 + AluSx SINE Alu 1 304 -8 2092 290 97 33 chr10 40733035 40733709 -99583056 - L2 LINE L2 -31 3282 2653 2191 117 0 7 chr10 40733709 40734007 -99582758 + AluSx SINE Alu 1 296 -16 2092 290 97 33 chr10 40734007 40734554 -99582211 - L2 LINE L2 -660 2653 1982 1996 143 7 3 chr10 40735701 40735995 -99580770 + AluSx SINE Alu 1 295 -17 261 298 124 14 chr10 40736226 40736444 -99580321 + HAL1b LINE L1 231 472 -876 649 231 143 23 chr10 40736926 40737193 -99579572 - L1MC4a LINE L1 -3598 2617 2307 2288 103 3 3 chr10 40737193 40737493 -99579272 - AluSg SINE Alu -10 300 1 649 231 143 23 chr10 40737493 40737533 -99579232 - L1MC4a LINE L1 -3908 2307 2273 740 127 0 0 chr10 40737555 40737665 -99579100 - AluSx SINE Alu -9 303 194 1046 135 0 0 chr10 40737666 40737807 -99578958 - AluSx SINE Alu -172 141 1 488 262 93 16 chr10 40737812 40737995 -99578770 - L1MC4a LINE L1 -4102 2294 2098 252 88 0 0 chr10 40737997 40738031 -99578734 + Tigger4(Zombi) DNA MER2_type -2 31 -2700 417 257 26 0 chr10 40738032 40738145 -99578620 - MER45R DNA AcHobo -1023 558 443 757 241 20 30 chr10 40738314 40738517 -99578248 - MER45R DNA AcHobo -1377 204 4 956 265 104 15 chr10 40738519 40739242 -99577523 - L1M4 LINE L1 -2279 3867 3032 276 206 33 76 chr10 40739263 40739447 -99577318 + (CATATA)n Simple_repeat Simple_repeat 4 179 0 381 190 66 33 chr10 40739457 40739578 -99577187 + L1M4 LINE L1 3034 3158 -2988 1443 260 67 41 chr10 40739639 40740447 -99576318 - L1M4 LINE L1 -3185 2961 2133 2648 273 67 46 chr10 40740484 40741235 -99575530 - L1MC4a LINE L1 -4401 1995 1261 2417 81 7 0 chr10 40741235 40741542 -99575223 - AluSc SINE Alu 0 309 1 2648 273 67 46 chr10 40741542 40741673 -99575092 - L1MC4a LINE L1 -5135 1261 1134 1675 137 16 73 chr10 40741673 40741987 -99574778 - AluJb SINE Alu -4 308 13 2648 273 67 46 chr10 40741987 40742704 -99574061 - L1MC4a LINE L1 -5262 1134 362 1475 268 94 13 chr10 40742704 40743246 -99573519 + L1M4b LINE L1 347 932 -5927 2145 236 67 13 chr10 40743364 40743922 -99572843 + L1M4b LINE L1 936 1462 -5393 2182 117 13 0 chr10 40743922 40744221 -99572544 + AluSx SINE Alu 1 303 -9 2145 236 67 13 chr10 40744221 40744380 -99572385 + L1M4b LINE L1 1462 1611 -5244 2213 121 0 6 chr10 40744380 40744695 -99572070 + AluSq SINE Alu 1 313 0 2145 236 67 13 chr10 40744695 40744913 -99571852 + L1M4b LINE L1 1611 1901 -4954 449 198 42 0 chr10 40744915 40745011 -99571754 + U6 snRNA snRNA 2 101 -6 460 233 27 20 chr10 40745056 40745202 -99571563 + L1M4b LINE L1 2029 2175 -4784 187 296 111 25 chr10 40745289 40745370 -99571395 - MIR SINE MIR -97 165 78 2391 47 3 0 chr10 40745382 40745680 -99571085 - L1PA4 LINE L1 -3 6152 5854 336 328 85 10 chr10 40745742 40746037 -99570728 + L1M4b LINE L1 2265 2683 -4455 1603 195 17 23 chr10 40746037 40746339 -99570426 + AluJb SINE Alu 1 300 -12 231 222 0 0 chr10 40746348 40746402 -99570363 + A-rich Low_complexity Low_complexity 1 54 0 2112 106 27 3 chr10 40746408 40746700 -99570065 + AluSx SINE Alu 1 299 -13 584 238 59 111 chr10 40746724 40746866 -99569899 + L1MEc LINE L1 1731 1879 -4336 907 136 90 7 chr10 40746866 40747021 -99569744 + L1PA8A LINE L1 5946 6113 -18 180 0 0 0 chr10 40747028 40747048 -99569717 + (CAA)n Simple_repeat Simple_repeat 2 21 0 584 238 59 111 chr10 40747048 40747079 -99569686 + L1MEc LINE L1 1885 1916 -4299 1264 138 47 30 chr10 40747079 40747311 -99569454 - MER46A DNA MER2_type 0 236 1 584 238 59 111 chr10 40747311 40747551 -99569214 + L1MEc LINE L1 1916 2095 -4120 930 191 80 0 chr10 40747567 40747766 -99568999 + L1PB4 LINE L1 5942 6156 0 299 185 15 15 chr10 40747868 40747933 -99568832 - Tigger5 DNA MER2_type 0 2323 2259 288 218 0 0 chr10 40748035 40748090 -99568675 - Tigger5 DNA MER2_type -2268 55 1 5345 252 84 31 chr10 40748167 40749367 -99567398 + L1MEc LINE L1 2276 3412 -2803 1900 156 7 16 chr10 40749367 40749675 -99567090 + AluJb SINE Alu 5 309 -3 5345 252 84 31 chr10 40749675 40750488 -99566277 + L1MEc LINE L1 3412 4181 -2034 1464 156 120 18 chr10 40750488 40750764 -99566001 + AluSg SINE Alu 1 304 -6 5345 252 84 31 chr10 40750764 40751266 -99565499 + L1MEc LINE L1 4181 4655 -1560 2057 133 13 7 chr10 40751266 40751568 -99565197 + AluSg SINE Alu 1 304 -6 5345 252 84 31 chr10 40751568 40751990 -99564775 + L1MEc LINE L1 4655 5407 -808 1929 256 91 40 chr10 40751984 40752429 -99564336 - L1M4 LINE L1 -1820 5137 4716 * 2019 145 10 3 chr10 40752429 40752732 -99564033 - AluSx SINE Alu -7 305 1 1929 256 91 40 chr10 40752732 40753184 -99563581 - L1M4 LINE L1 -2241 4716 4194 2397 169 73 60 chr10 40753224 40753472 -99563293 + L1MC3 LINE L1 6202 6445 -1340 2134 145 0 0 chr10 40753472 40753782 -99562983 + AluSx SINE Alu 1 310 -2 2397 169 73 60 chr10 40753782 40754186 -99562579 + L1MC3 LINE L1 6445 6863 -922 2609 184 53 8 chr10 40754201 40754799 -99561966 + L1MC3 LINE L1 7124 7748 -37 2750 217 28 45 chr10 40754827 40754879 -99561886 + L1MB8 LINE L1 5352 5403 -775 2213 104 0 3 chr10 40754879 40755178 -99561587 + AluSg1 SINE Alu 1 298 -11 2750 217 28 45 chr10 40755178 40755842 -99560923 + L1MB8 LINE L1 5403 6077 -101 2154 111 3 3 chr10 40755842 40756131 -99560634 + AluSx SINE Alu 1 289 -23 1671 108 62 88 chr10 40756139 40756446 -99560319 + AluSx SINE Alu 1 299 -13 2750 217 28 45 chr10 40756446 40756547 -99560218 + L1MB8 LINE L1 6084 6165 -13 2114 93 4 4 chr10 40756903 40757207 -99559558 - AluSc SINE Alu 0 304 1 1421 194 88 38 chr10 40757265 40757290 -99559475 - L1MD2 LINE L1 -12 6347 6325 2231 135 0 0 chr10 40757290 40757602 -99559163 - AluJb SINE Alu 0 312 1 1421 194 88 38 chr10 40757602 40757999 -99558766 - L1MD2 LINE L1 -34 6325 5904 962 264 81 25 chr10 40757999 40758396 -99558369 + LTR52 LTR ERVL 1 419 -2 1416 223 73 8 chr10 40758397 40758796 -99557969 - L1MD2 LINE L1 -453 5906 5482 568 251 76 4 chr10 40758835 40759086 -99557679 - L1M4 LINE L1 -4946 2013 1745 276 162 27 14 chr10 40759154 40759228 -99557537 - L1M4 LINE L1 -5412 1447 1373 305 261 114 23 chr10 40759271 40759447 -99557318 + L1MB4 LINE L1 15 206 -6336 1315 250 25 35 chr10 40759447 40760123 -99556642 + L1MB4 LINE L1 1764 2445 -4199 2064 143 0 13 chr10 40760123 40760437 -99556328 + AluSx SINE Alu 3 312 0 1315 250 25 35 chr10 40760437 40760586 -99556179 + L1MB4 LINE L1 2445 2594 -4050 222 0 79 0 chr10 40760586 40760624 -99556141 + T-rich Low_complexity Low_complexity 1 41 0 1569 159 50 4 chr10 40760624 40760882 -99555883 - AluJo SINE Alu -32 280 11 1315 250 25 35 chr10 40760882 40761241 -99555524 + L1MB4 LINE L1 2592 3043 -3601 1213 189 67 42 chr10 40761243 40761528 -99555237 + AluJb SINE Alu 1 292 -20 204 40 0 0 chr10 40761538 40761563 -99555202 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 760 213 45 5 chr10 40761717 40761919 -99554846 + L1MB4 LINE L1 5194 5403 -1241 508 240 39 7 chr10 40761932 40762086 -99554679 + L1MB5 LINE L1 5897 6055 -119 321 198 110 0 chr10 40762160 40762251 -99554514 + L1MB4 LINE L1 5528 5628 -1016 2157 108 18 0 chr10 40762260 40762546 -99554219 + AluSx SINE Alu 1 291 -21 198 0 0 0 chr10 40762547 40762569 -99554196 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 1711 218 138 7 chr10 40762576 40763113 -99553652 + L1MB4 LINE L1 6070 6676 -2 4850 235 84 63 chr10 40763128 40763195 -99553570 - L1MDa LINE L1 -1222 5318 5254 1312 189 51 61 chr10 40763195 40763570 -99553195 - MLT1A2 LTR MaLR 0 374 4 4850 235 84 63 chr10 40763570 40763694 -99553071 - L1MDa LINE L1 -1286 5254 5134 2726 179 62 2 chr10 40763694 40764213 -99552552 - MER44D DNA MER2_type 0 605 1 4850 235 84 63 chr10 40764213 40764708 -99552057 - L1MDa LINE L1 -1406 5134 4651 2269 105 23 0 chr10 40764708 40765013 -99551752 - AluSp SINE Alu -1 312 1 4850 235 84 63 chr10 40765013 40765646 -99551119 - L1MDa LINE L1 -1889 4651 4033 2104 127 0 7 chr10 40765646 40765945 -99550820 + AluSg SINE Alu 1 297 -13 4850 235 84 63 chr10 40765945 40766211 -99550554 - L1MDa LINE L1 -2507 4033 3774 2189 128 0 3 chr10 40766211 40766515 -99550250 - AluSx SINE Alu -9 303 1 4850 235 84 63 chr10 40766515 40767235 -99549530 - L1MDa LINE L1 -2766 3774 2944 1534 154 30 0 chr10 40767235 40767468 -99549297 - AluSg SINE Alu -9 301 62 4850 235 84 63 chr10 40767468 40767777 -99548988 - L1MDa LINE L1 -3596 2944 2643 696 186 6 25 chr10 40767808 40767969 -99548796 + L1M1 LINE L1 19 176 -7389 4003 111 82 20 chr10 40767969 40768660 -99548105 + L1MA2 LINE L1 5571 6304 0 845 211 223 0 chr10 40768664 40769014 -99547751 - L1MDa LINE L1 -3921 2619 2192 1161 221 112 5 chr10 40769019 40769403 -99547362 - L1MDa LINE L1 -4384 2156 1732 3785 42 0 0 chr10 40769406 40769918 -99546847 + L1PA4 LINE L1 5657 6168 0 518 216 132 25 chr10 40769951 40770155 -99546610 - L1MDa LINE L1 -4819 1721 1496 658 327 106 6 chr10 40770170 40770717 -99546048 + L2 LINE L2 2541 3149 -164 189 74 0 0 chr10 40770720 40770747 -99546018 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2049 133 23 0 chr10 40770769 40771071 -99545694 - AluSx SINE Alu -3 309 1 1897 114 0 52 chr10 40773269 40773577 -99543188 + AluSq SINE Alu 1 292 -21 1982 124 43 7 chr10 40773715 40773997 -99542768 + AluSq SINE Alu 1 292 -21 298 287 195 0 chr10 40774004 40774352 -99542413 + L1M4 LINE L1 4557 4972 -1174 416 219 26 123 chr10 40774508 40774554 -99542211 - MER58B DNA MER1_type -2080 340 291 2018 120 37 0 chr10 40774554 40774854 -99541911 + AluSx SINE Alu 1 311 -1 416 219 26 123 chr10 40774854 40774962 -99541803 - MER58B DNA MER1_type -2129 291 201 1780 98 7 102 chr10 40775160 40775465 -99541300 + AluSg SINE Alu 27 302 -8 2319 95 0 0 chr10 40775481 40775775 -99540990 + AluSc SINE Alu 1 294 -15 2110 136 0 0 chr10 40776158 40776468 -99540297 + AluSx SINE Alu 1 310 -2 200 254 183 14 chr10 40777154 40777225 -99539540 + MIR SINE MIR 21 103 -105 2221 81 34 0 chr10 40777292 40777587 -99539178 - AluSq SINE Alu -8 305 1 1627 156 28 21 chr10 40779228 40779516 -99537249 + AluJb SINE Alu 1 290 -22 2280 106 0 3 chr10 40779651 40779954 -99536811 + AluSc SINE Alu 1 302 -7 994 238 48 18 chr10 40780001 40780352 -99536413 - L1ME1 LINE L1 -1 6165 5809 1705 204 137 20 chr10 40780352 40780842 -99535923 - LTR10B LTR ERV1 0 547 1 297 265 20 0 chr10 40780842 40780944 -99535821 - L1ME1 LINE L1 -2230 5812 5709 1946 183 96 30 chr10 40781034 40781503 -99535262 - MLT2B1 LTR ERVL 0 520 21 2392 97 0 3 chr10 40781514 40781824 -99534941 - AluSp SINE Alu -4 309 1 4486 163 15 34 chr10 40781908 40782954 -99533811 - L1MA5 LINE L1 0 6300 5236 1778 170 3 0 chr10 40782954 40783263 -99533502 - AluJb SINE Alu 0 310 1 1865 131 77 0 chr10 40783272 40783438 -99533327 - AluSc SINE Alu -14 295 98 351 0 0 0 chr10 40783438 40783477 -99533288 + (TG)n Simple_repeat Simple_repeat 2 40 0 1865 131 77 0 chr10 40783477 40783584 -99533181 - AluSc SINE Alu -211 98 1 2037 114 4 4 chr10 40783594 40783912 -99532853 - AluY SINE Alu 0 318 1 4486 163 15 34 chr10 40783912 40784164 -99532601 - L1MA5 LINE L1 -1081 5219 4869 26 30 0 0 chr10 40784215 40784248 -99532517 + AT_rich Low_complexity Low_complexity 1 33 0 517 290 147 13 chr10 40784272 40784586 -99532179 - LTR50 LTR ERVL -3 792 437 593 160 50 8 chr10 40784731 40784850 -99531915 + L1MB7 LINE L1 6041 6164 -20 671 86 0 0 chr10 40784862 40784943 -99531822 - AluSc SINE Alu -16 293 213 638 235 51 77 chr10 40785032 40785464 -99531301 + LTR15 LTR ERV1 112 493 0 1478 175 38 55 chr10 40785466 40785866 -99530899 + HERV15 LTR ERV1 3 395 -8340 213 94 0 0 chr10 40786041 40786073 -99530692 + (TG)n Simple_repeat Simple_repeat 2 33 0 587 190 37 188 chr10 40786105 40786426 -99530339 - MLT2B1 LTR ERVL -40 374 100 2363 200 30 2 chr10 40786506 40786966 -99529799 - L1PB4 LINE L1 0 6156 5684 1774 173 0 0 chr10 40786967 40787256 -99529509 - AluJo SINE Alu -12 300 12 1191 136 0 0 chr10 40787258 40787435 -99529330 - AluSg/x SINE Alu -15 295 119 42708 38 24 4 chr10 40787438 40793446 -99523319 - L1PA2 LINE L1 -15 6140 3 418 103 162 0 chr10 40793462 40793530 -99523235 - AluY SINE Alu -179 132 54 1175 149 0 16 chr10 40793531 40793719 -99523046 - AluSg SINE Alu -125 185 1 993 117 94 103 chr10 40793720 40793916 -99522849 - L1PB4 LINE L1 -476 5680 5485 855 99 0 0 chr10 40793916 40794027 -99522738 - HY1 scRNA scRNA -1 111 1 993 117 94 103 chr10 40794027 40794053 -99522712 - L1PB4 LINE L1 -671 5485 5460 520 168 196 0 chr10 40794054 40794161 -99522604 - MLT2B2 LTR ERVL -387 128 1 243 277 119 10 chr10 40794167 40794268 -99522497 - MIR SINE MIR -57 151 40 876 242 64 64 chr10 40795079 40795370 -99521395 + L1MEc LINE L1 36 329 -6067 1914 166 3 3 chr10 40795370 40795678 -99521087 + AluSx SINE Alu 1 308 -4 876 242 64 64 chr10 40795678 40795745 -99521020 + L1MEc LINE L1 328 394 -6002 1791 179 67 8 chr10 40796766 40797124 -99519641 + MLT1B LTR MaLR 1 379 -11 1574 80 0 10 chr10 40797172 40797371 -99519394 + MER107 DNA MER1_type 1 197 0 1640 164 30 23 chr10 40797448 40797589 -99519176 + AluJb SINE Alu 1 140 -172 2015 124 21 3 chr10 40797589 40797880 -99518885 + AluSx SINE Alu 1 296 -16 1640 164 30 23 chr10 40797880 40798042 -99518723 + AluJb SINE Alu 140 306 -6 21 0 0 0 chr10 40798345 40798366 -99518399 + AT_rich Low_complexity Low_complexity 1 21 0 2164 108 3 0 chr10 40798369 40798679 -99518086 + AluSp SINE Alu 1 311 0 1293 214 51 11 chr10 40798792 40799067 -99517698 - AluJo SINE Alu -26 286 1 2230 111 3 0 chr10 40799724 40800022 -99516743 + AluSp SINE Alu 1 299 -14 317 280 75 0 chr10 40800034 40800141 -99516624 - L1M4b LINE L1 -6737 122 8 1800 134 47 30 chr10 40800145 40800443 -99516322 - AluSx SINE Alu -9 303 1 2306 108 13 0 chr10 40800459 40800765 -99516000 - AluSg SINE Alu 0 310 1 497 206 10 0 chr10 40800768 40800870 -99515895 - L1MEc LINE L1 -1980 4235 4133 1113 90 0 0 chr10 40800872 40801006 -99515759 - AluSq/x SINE Alu -179 134 1 1455 188 43 190 chr10 40801012 40801043 -99515722 - L1MEc LINE L1 -2814 3401 3367 2334 108 0 0 chr10 40801043 40801348 -99515417 - AluSg SINE Alu 0 310 6 1455 188 43 190 chr10 40801348 40801747 -99515018 - L1MEc LINE L1 -2848 3367 2911 1948 140 7 3 chr10 40801747 40802039 -99514726 - AluSg SINE Alu -17 293 1 1455 188 43 190 chr10 40802039 40802076 -99514689 - L1MEc LINE L1 -3304 2911 2870 1446 197 44 7 chr10 40802076 40802371 -99514394 + AluJo SINE Alu 5 310 -2 1455 188 43 190 chr10 40802371 40802708 -99514057 - L1MEc LINE L1 -3345 2870 2753 2166 124 3 3 chr10 40802708 40803014 -99513751 - AluSp SINE Alu -7 306 1 1455 188 43 190 chr10 40803014 40803157 -99513608 - L1MEc LINE L1 -3462 2753 2591 4101 222 75 38 chr10 40803189 40803510 -99513255 - L1MEc LINE L1 -5058 1338 1030 2223 119 0 0 chr10 40803510 40803805 -99512960 + AluSg SINE Alu 1 295 -15 4101 222 75 38 chr10 40803805 40803993 -99512772 - L1MEc LINE L1 -5366 1030 851 2138 112 10 0 chr10 40803993 40804287 -99512478 - AluSx SINE Alu -15 297 1 4101 222 75 38 chr10 40804287 40805027 -99511738 - L1MEc LINE L1 -5545 851 41 739 181 0 0 chr10 40805027 40805154 -99511611 - AluSg/x SINE Alu -4 308 182 5203 55 132 169 chr10 40805176 40805673 -99511092 + MER11A LTR ERVK 1 515 -751 1306 14 0 0 chr10 40805673 40805817 -99510948 - AluYb8 SINE Alu -3 315 172 5203 55 132 169 chr10 40805817 40806392 -99510373 + MER11A LTR ERVK 515 1265 -1 1070 131 0 0 chr10 40806392 40806537 -99510228 - AluSq/x SINE Alu -168 145 1 1094 216 14 106 chr10 40806547 40806602 -99510163 + L1MC4 LINE L1 7655 7713 -329 1923 145 0 26 chr10 40806602 40806906 -99509859 + AluSc SINE Alu 1 296 -13 1094 216 14 106 chr10 40806906 40807208 -99509557 + L1MC4 LINE L1 7713 7971 -71 1934 146 43 0 chr10 40807208 40807489 -99509276 - AluSg SINE Alu -17 293 1 1094 216 14 106 chr10 40807489 40807547 -99509218 + L1MC4 LINE L1 7971 8033 -9 1980 138 3 10 chr10 40807547 40807845 -99508920 + AluSx SINE Alu 1 296 -16 2293 109 0 3 chr10 40807929 40808231 -99508534 + AluSq SINE Alu 1 301 -12 236 263 53 96 chr10 40808233 40808442 -99508323 + L1ME3A LINE L1 5963 6162 -8 403 118 108 49 chr10 40808743 40808845 -99507920 - MER54A LTR ERVL -786 115 8 2185 111 0 0 chr10 40808985 40809274 -99507491 - AluSc SINE Alu -20 289 1 4798 137 27 21 chr10 40809313 40810087 -99506678 - MER4E LTR ERV1 0 779 1 3128 183 52 23 chr10 40810222 40810250 -99506515 + MER67C LTR ERV1 3 29 -681 2169 114 0 10 chr10 40810250 40810548 -99506217 + AluSg1 SINE Alu 1 295 -14 3128 183 52 23 chr10 40810548 40811207 -99505558 + MER67C LTR ERV1 29 710 0 222 297 16 0 chr10 40811226 40811290 -99505475 + (TATG)n Simple_repeat Simple_repeat 1 65 0 1661 186 62 3 chr10 40811385 40811708 -99505057 + MER2 DNA MER2_type 2 343 -1 307 216 93 174 chr10 40812270 40812604 -99504161 - L1M2 LINE L1 -5835 1014 708 6403 148 26 9 chr10 40813491 40815277 -99501488 - L1MA4 LINE L1 -3 6297 4543 1677 151 79 11 chr10 40815277 40815556 -99501209 - AluSx SINE Alu -14 298 1 6403 148 26 9 chr10 40815556 40815706 -99501059 - L1MA4 LINE L1 -1757 4543 4397 2261 101 3 3 chr10 40815706 40816004 -99500761 - AluSp SINE Alu -15 298 1 6403 148 26 9 chr10 40816004 40816187 -99500578 - L1MA4 LINE L1 -1903 4397 4146 323 205 79 39 chr10 40816737 40816864 -99499901 - L1ME4a LINE L1 -274 5847 5716 387 0 0 0 chr10 40817216 40817259 -99499506 + (TG)n Simple_repeat Simple_repeat 2 44 0 629 308 70 0 chr10 40817352 40817537 -99499228 + Charlie1a DNA MER1_type 1 198 -1257 2228 110 3 3 chr10 40817557 40817856 -99498909 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 40817865 40817887 -99498878 + AT_rich Low_complexity Low_complexity 1 22 0 500 332 105 9 chr10 40817988 40818253 -99498512 - L2 LINE L2 -250 3063 2777 207 0 0 0 chr10 40818255 40818278 -99498487 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1597 236 19 3 chr10 40818329 40818702 -99498063 - L1M4 LINE L1 -2070 4076 3698 662 254 90 11 chr10 40818708 40818897 -99497868 + MER63A DNA MER1_type 7 210 0 542 299 10 10 chr10 40818897 40819104 -99497661 - L1M4 LINE L1 -2448 3698 3492 3981 174 51 20 chr10 40819106 40819890 -99496875 - L1MB5 LINE L1 -1 6409 5602 1125 229 87 0 chr10 40819926 40820144 -99496621 + MER8 DNA MER2_type 3 239 0 3014 223 71 19 chr10 40820146 40820235 -99496530 - L1MB5 LINE L1 -788 5594 5511 2258 111 3 0 chr10 40820235 40820532 -99496233 + AluSx SINE Alu 1 298 -14 1995 139 0 0 chr10 40820534 40820815 -99495950 + AluSg SINE Alu 1 281 -29 3014 223 71 19 chr10 40820815 40821182 -99495583 - L1MB5 LINE L1 -871 5511 5164 1660 180 44 3 chr10 40821182 40821476 -99495289 + AluJb SINE Alu 1 306 -6 3014 223 71 19 chr10 40821476 40821844 -99494921 - L1MB5 LINE L1 -1218 5164 4723 1493 240 62 24 chr10 40821828 40822110 -99494655 - L1MB5 LINE L1 -3793 2589 2319 * 2259 121 131 31 chr10 40822110 40822457 -99494308 + MSTA LTR MaLR 1 392 -36 2059 118 20 10 chr10 40822457 40822753 -99494012 - AluSx SINE Alu -13 299 1 2259 121 131 31 chr10 40822753 40822793 -99493972 + MSTA LTR MaLR 392 427 -1 1493 240 62 24 chr10 40822793 40823463 -99493302 - L1MB5 LINE L1 -4063 2319 1515 6681 183 29 1 chr10 40823477 40824647 -99492118 - MSTB-int LTR MaLR -446 1205 3 2873 142 9 34 chr10 40824647 40824889 -99491876 - MSTB LTR MaLR 0 426 198 2152 137 0 0 chr10 40824889 40825195 -99491570 - AluSx SINE Alu -4 308 3 2873 142 9 34 chr10 40825195 40825389 -99491376 - MSTB LTR MaLR -228 198 1 1976 137 3 26 chr10 40825468 40825798 -99490967 + AluSx SINE Alu 1 312 0 314 267 17 35 chr10 40825829 40825945 -99490820 - L1MB5 LINE L1 -6248 136 23 779 259 29 38 chr10 40825950 40826266 -99490499 - L1M4 LINE L1 -2636 3510 3198 419 250 72 0 chr10 40826310 40826462 -99490303 - L1M4 LINE L1 -3283 2863 2701 2182 96 3 26 chr10 40826633 40826935 -99489830 - AluSg SINE Alu -15 295 1 2384 88 3 3 chr10 40826945 40827250 -99489515 - AluSp SINE Alu -8 305 1 355 273 85 12 chr10 40827362 40827527 -99489238 - HAL1 LINE L1 -856 1651 1475 2412 75 0 31 chr10 40828238 40828557 -99488208 - AluY SINE Alu -2 309 1 1348 106 0 0 chr10 40828799 40828978 -99487787 + AluY SINE Alu 124 302 -9 2320 99 0 0 chr10 40828980 40829284 -99487481 + AluSx SINE Alu 1 304 -8 242 156 22 0 chr10 40829284 40829329 -99487436 + HAL1b LINE L1 492 537 -811 232 311 0 0 chr10 40829321 40829395 -99487370 + L1M4 LINE L1 2944 3017 -3129 * 21 0 0 31 chr10 40829821 40829836 -99486929 + AT_rich Low_complexity Low_complexity 1 15 -16 1982 139 0 3 chr10 40829836 40830124 -99486641 - AluSx SINE Alu -25 287 1 21 0 0 31 chr10 40830124 40830140 -99486625 + AT_rich Low_complexity Low_complexity 15 31 0 487 200 0 11 chr10 40830158 40830248 -99486517 - AluSg/x SINE Alu -83 226 138 331 303 84 26 chr10 40830702 40830773 -99485992 + L2 LINE L2 3146 3211 -102 2034 161 52 3 chr10 40830773 40831102 -99485663 - MER7A DNA MER2_type -1 345 3 331 303 84 26 chr10 40831102 40831185 -99485580 + L2 LINE L2 3211 3309 -4 2297 100 7 0 chr10 40831955 40832255 -99484510 - AluSp SINE Alu -11 302 1 369 283 0 0 chr10 40832797 40832889 -99483876 + L2 LINE L2 3222 3313 0 1965 124 13 23 chr10 40832907 40833213 -99483552 + AluSx SINE Alu 1 303 -9 2184 122 0 0 chr10 40833723 40834018 -99482747 - AluSx SINE Alu -17 295 1 639 240 173 18 chr10 40838055 40838280 -99478485 + MIR SINE MIR 2 261 -1 1222 204 104 36 chr10 40838440 40838749 -99478016 + MER58B DNA MER1_type 1 330 -11 1808 160 0 27 chr10 40839325 40839625 -99477140 - AluJb SINE Alu -16 296 5 22 0 0 0 chr10 40839938 40839960 -99476805 + AT_rich Low_complexity Low_complexity 1 22 0 1520 161 56 0 chr10 40840022 40840271 -99476494 + AluSx SINE Alu 5 267 -45 375 270 132 17 chr10 40840770 40841147 -99475618 + MLT1H LTR MaLR 32 521 -34 1951 150 6 22 chr10 40841329 40841468 -99475297 + AluSq SINE Alu 1 141 -172 2118 105 14 7 chr10 40841468 40841763 -99475002 + AluSg SINE Alu 1 297 -13 1951 150 6 22 chr10 40841763 40841936 -99474829 + AluSq SINE Alu 141 308 -5 2260 119 0 0 chr10 40842320 40842623 -99474142 - AluSc SINE Alu -5 304 2 2340 87 3 7 chr10 40842624 40842923 -99473842 - AluSg SINE Alu -12 298 1 2004 138 7 7 chr10 40843102 40843398 -99473367 + AluSx SINE Alu 1 296 -16 232 275 0 29 chr10 40843478 40843547 -99473218 + MER88 LTR ERVL 87 153 -311 * 1666 204 101 28 chr10 40843488 40843953 -99472812 - MER74B LTR ERVL -77 545 47 2079 146 0 0 chr10 40844069 40844364 -99472401 + AluSx SINE Alu 1 295 -17 1476 227 0 0 chr10 40844618 40844895 -99471870 + HERVS71 LTR ERV1 7972 8248 -730 464 155 36 12 chr10 40844913 40844997 -99471768 - LTR6A LTR ERV1 -478 86 1 29521 186 5 2 chr10 40844997 40850137 -99466628 - HERVS71 LTR ERV1 -69 8909 3721 14393 217 31 14 chr10 40850144 40853558 -99463207 - HERVS71 LTR ERV1 -5381 3597 4 2401 175 26 36 chr10 40853560 40854063 -99462702 - LTR6B LTR ERV1 0 558 61 734 352 38 14 chr10 40854654 40855077 -99461688 + ERVL LTR ERVL 2644 3076 -2688 1627 140 83 88 chr10 40855445 40855649 -99461116 + L1MA8 LINE L1 5857 6060 -231 1788 92 135 11 chr10 40855649 40855909 -99460856 + AluSg1 SINE Alu 1 292 -17 1627 140 83 88 chr10 40855909 40856112 -99460653 + L1MA8 LINE L1 6060 6262 -29 238 217 0 0 chr10 40856105 40856151 -99460614 - L1MC4 LINE L1 -1341 6701 6656 * 303 102 0 0 chr10 40856141 40856190 -99460575 + L1MA8 LINE L1 6221 6269 -22 1689 179 14 0 chr10 40856190 40856475 -99460290 + AluJb SINE Alu 1 289 -23 2162 116 0 7 chr10 40856481 40856774 -99459991 + AluSp SINE Alu 1 291 -22 2230 118 3 0 chr10 40856786 40857082 -99459683 + AluSq SINE Alu 1 297 -16 1636 185 10 13 chr10 40857091 40857394 -99459371 + AluSx SINE Alu 6 307 -5 2375 104 57 28 chr10 40857424 40857778 -99458987 + THE1B LTR MaLR 1 364 0 973 336 111 32 chr10 40857822 40858688 -99458077 + ERVL LTR ERVL 3572 4505 -1259 1619 171 79 0 chr10 40858819 40859111 -99457654 + MLT1A1 LTR MaLR 49 363 -2 721 160 33 73 chr10 40859185 40859335 -99457430 - AluJo SINE Alu -87 225 82 2415 94 0 0 chr10 40859598 40859895 -99456870 + AluY SINE Alu 1 297 -14 2578 145 14 11 chr10 40859907 40860348 -99456417 + L1MB7 LINE L1 5694 6135 -49 491 257 46 0 chr10 40860376 40860485 -99456280 - MER81 DNA DNA 0 114 1 495 271 93 16 chr10 40860540 40860798 -99455967 + L1MEc LINE L1 980 1224 -4981 824 272 51 12 chr10 40860892 40861223 -99455542 + L1MEc LINE L1 1543 1886 -4510 251 270 130 0 chr10 40861227 40861342 -99455423 - L1M4 LINE L1 -3160 2986 2857 2282 104 0 3 chr10 40861361 40861660 -99455105 - AluSq SINE Alu -14 299 2 4269 164 25 13 chr10 40861746 40861793 -99454972 - L1MB1 LINE L1 0 6168 6123 2359 85 3 0 chr10 40861793 40862088 -99454677 - AluSg SINE Alu -14 296 1 4269 164 25 13 chr10 40862088 40862277 -99454488 - L1MB1 LINE L1 -45 6123 5938 885 170 110 60 chr10 40862277 40862477 -99454288 + MER6B DNA MER2_type 1 210 0 4269 164 25 13 chr10 40862477 40863007 -99453758 - L1MB1 LINE L1 -230 5938 5392 2360 233 106 7 chr10 40863006 40863707 -99453058 - L1M4 LINE L1 -3267 2879 2110 * 2875 150 35 33 chr10 40863708 40863838 -99452927 - L1PA15 LINE L1 -3 6162 6034 2247 115 0 3 chr10 40863838 40864142 -99452623 - AluSx SINE Alu -8 304 2 2875 150 35 33 chr10 40864142 40864530 -99452235 - L1PA15 LINE L1 -131 6034 5643 1828 68 25 0 chr10 40864530 40864746 -99452019 - L1MA1 LINE L1 -1 6301 6059 2190 114 0 3 chr10 40864747 40865044 -99451721 - AluSg SINE Alu -14 296 1 6427 176 14 5 chr10 40865048 40865680 -99451085 - L1MB1 LINE L1 -880 5266 4618 2324 100 7 0 chr10 40865680 40865990 -99450775 - AluSx SINE Alu 0 312 1 6427 176 14 5 chr10 40865990 40866531 -99450234 - L1MB1 LINE L1 -1528 4618 4083 4173 158 60 15 chr10 40866517 40867721 -99449044 - L1P4 LINE L1 -477 5688 4410 * 2068 107 4 7 chr10 40867721 40868034 -99448731 - AluSg SINE Alu 0 312 1 4173 158 60 15 chr10 40868034 40868097 -99448668 - L1P4 LINE L1 -1755 4410 4351 1997 130 58 0 chr10 40868130 40868422 -99448343 - AluSx SINE Alu -3 309 1 1544 159 41 12 chr10 40868426 40868793 -99447972 - L1MC/D LINE L1 -743 5821 5612 622 203 27 59 chr10 40868827 40868933 -99447832 - L1MC/D LINE L1 -4205 2359 2260 2989 83 11 5 chr10 40868933 40869306 -99447459 + THE1C LTR MaLR 1 375 0 622 203 27 59 chr10 40869306 40869386 -99447379 - L1MC/D LINE L1 -4304 2260 2179 2973 186 104 42 chr10 40869397 40870456 -99446309 - L1MCa LINE L1 -4455 2109 894 1113 216 50 11 chr10 40870518 40870801 -99445964 - L1MCa LINE L1 -5162 883 590 437 113 0 0 chr10 40870793 40870855 -99445910 + L1MB7 LINE L1 5558 5619 -561 * 2239 159 151 75 chr10 40870875 40870902 -99445863 + LTR25 LTR ERV1 38 62 -732 2163 118 0 10 chr10 40870902 40871206 -99445559 - AluSx SINE Alu -11 301 1 2239 159 151 75 chr10 40871206 40871839 -99444926 + LTR25 LTR ERV1 62 794 0 1585 214 69 18 chr10 40871857 40872250 -99444515 + L1MB7 LINE L1 5617 6029 -155 752 183 73 74 chr10 40872244 40872283 -99444482 + L1MC3 LINE L1 7541 7579 -463 * 1639 181 24 7 chr10 40872283 40872575 -99444190 - AluJb SINE Alu -15 297 1 752 183 73 74 chr10 40872575 40872761 -99444004 + L1MC3 LINE L1 7579 8035 -7 2017 138 0 24 chr10 40872998 40873296 -99443469 + AluSx SINE Alu 1 291 -21 896 247 112 55 chr10 40873321 40873738 -99443027 + L1MEc LINE L1 1439 1831 -4565 1905 93 90 0 chr10 40873738 40874006 -99442759 + AluSc SINE Alu 1 292 -17 896 247 112 55 chr10 40874006 40874077 -99442688 + L1MEc LINE L1 1831 1897 -4499 2270 97 0 13 chr10 40874077 40874375 -99442390 + AluSx SINE Alu 1 294 -18 896 247 112 55 chr10 40874375 40874629 -99442136 + L1MEc LINE L1 1897 2224 -4172 * 2121 217 91 7 chr10 40874605 40875483 -99441282 + L1MDb LINE L1 4 1073 -5333 2122 106 0 3 chr10 40875483 40875765 -99441000 + AluSx SINE Alu 1 281 -31 2121 217 91 7 chr10 40875765 40875794 -99440971 + L1MDb LINE L1 1073 1098 -5308 1558 222 45 26 chr10 40875807 40876185 -99440580 + L1MA9 LINE L1 3 387 -6781 4292 196 45 19 chr10 40876193 40877005 -99439760 + L1MA9 LINE L1 5813 6678 -655 2207 100 24 0 chr10 40877005 40877296 -99439469 + AluSp SINE Alu 1 298 -15 4292 196 45 19 chr10 40877296 40877925 -99438840 + L1MA9 LINE L1 6678 7289 -44 2232 178 52 24 chr10 40877925 40878346 -99438419 + Tigger2a DNA MER2_type 1 433 -1 5070 137 33 35 chr10 40878346 40878606 -99438159 + Tigger3b DNA MER2_type 322 581 -2447 1776 156 17 13 chr10 40878606 40878907 -99437858 + AluJb SINE Alu 1 302 -10 5070 137 33 35 chr10 40878907 40879043 -99437722 + Tigger3b DNA MER2_type 581 716 -2312 2175 117 7 0 chr10 40879043 40879341 -99437424 + AluSq SINE Alu 1 300 -13 5070 137 33 35 chr10 40879341 40879854 -99436911 + Tigger3b DNA MER2_type 716 1230 -1 1817 230 66 78 chr10 40879855 40880299 -99436466 + L1ME2 LINE L1 4228 4676 -1470 2269 105 0 0 chr10 40880299 40880594 -99436171 + AluSx SINE Alu 2 296 -16 1817 230 66 78 chr10 40880594 40880710 -99436055 + L1ME2 LINE L1 4676 4792 -1354 2159 138 14 46 chr10 40880710 40881058 -99435707 - MER1B DNA MER1_type 0 337 1 1817 230 66 78 chr10 40881058 40881282 -99435483 + L1ME2 LINE L1 4792 5004 -1142 1034 150 0 6 chr10 40881419 40881579 -99435186 + AluSp SINE Alu 150 308 -5 2212 228 65 66 chr10 40881599 40882047 -99434718 + L1ME2 LINE L1 5258 5705 -459 1987 170 66 47 chr10 40882047 40882471 -99434294 - MSTB1 LTR MaLR 0 432 1 2212 228 65 66 chr10 40882471 40882718 -99434047 + L1ME2 LINE L1 5705 5954 -210 665 140 149 0 chr10 40882718 40882832 -99433933 + FLAM_C SINE Alu 1 131 -2 2212 228 65 66 chr10 40882832 40882934 -99433831 + L1ME2 LINE L1 5954 6055 -109 7332 41 10 5 chr10 40882946 40883828 -99432937 - L1PA6 LINE L1 -6 6148 5262 300 244 47 87 chr10 40883826 40883885 -99432880 + L1ME1 LINE L1 6043 6103 -61 * 1971 152 52 33 chr10 40883885 40884253 -99432512 - THE1C LTR MaLR 0 375 1 300 244 47 87 chr10 40884253 40884320 -99432445 + L1ME1 LINE L1 6103 6164 0 40315 36 24 2 chr10 40885901 40891919 -99424846 - L1PA2 LINE L1 -1 6154 2 38 39 0 0 chr10 40894605 40894657 -99422108 + AT_rich Low_complexity Low_complexity 1 52 0 2306 107 7 0 chr10 40894741 40895051 -99421714 + AluSp SINE Alu 1 312 -1 25 0 0 0 chr10 40895185 40895210 -99421555 + AT_rich Low_complexity Low_complexity 1 25 0 2122 119 3 0 chr10 40895247 40895542 -99421223 - AluSx SINE Alu -16 296 1 2205 108 0 3 chr10 40895542 40895828 -99420937 - AluSx SINE Alu -23 289 5 390 240 0 3 chr10 40897277 40897384 -99419381 + MER2 DNA MER2_type 1 106 -133 614 240 32 0 chr10 40897405 40897559 -99419206 + L1ME LINE L1 838 996 -5427 925 248 131 26 chr10 40897690 40898250 -99418515 + L1ME LINE L1 1860 2667 -4455 1171 189 59 8 chr10 40898256 40898494 -99418271 + AluJb SINE Alu 54 303 -9 376 232 16 24 chr10 40898532 40898657 -99418108 + L1ME LINE L1 2693 2816 -4306 498 78 0 165 chr10 40898661 40898764 -99418001 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 1992 127 132 5 chr10 40898801 40899172 -99417593 + MSTA LTR MaLR 1 418 -10 1229 137 49 0 chr10 40899212 40899416 -99417349 - Tigger4(Zombi) DNA MER2_type -2517 214 1 488 262 93 16 chr10 40899421 40899604 -99417161 + L1ME LINE L1 2824 3020 -4102 751 127 0 2 chr10 40899609 40899863 -99416902 + AluSx SINE Alu 1 303 -7 649 231 143 23 chr10 40899885 40899925 -99416840 + L1ME LINE L1 2999 3033 -3908 2157 114 7 3 chr10 40899925 40900224 -99416541 + AluSg SINE Alu 1 300 -10 649 231 143 23 chr10 40900224 40900491 -99416274 + L1ME LINE L1 3033 3343 -3598 263 286 95 54 chr10 40900950 40901191 -99415574 - HAL1b LINE L1 -867 481 231 1977 150 7 3 chr10 40901422 40901716 -99415049 - AluSx SINE Alu -17 295 1 2149 292 98 34 chr10 40902861 40903408 -99413357 + L2 LINE L2 1982 2492 -821 2191 117 0 7 chr10 40903408 40903706 -99413059 - AluSx SINE Alu -16 296 1 2149 292 98 34 chr10 40903706 40904380 -99412385 + L2 LINE L2 2492 3282 -31 2274 99 7 3 chr10 40904401 40904704 -99412061 - AluSx SINE Alu -8 304 1 2450 81 3 0 chr10 40905954 40906252 -99410513 - AluSp SINE Alu -14 299 1 406 292 32 5 chr10 40906574 40906759 -99410006 + L1M4 LINE L1 4138 4327 -1819 2258 101 0 3 chr10 40906761 40907059 -99409706 + AluSg SINE Alu 1 297 -13 2895 131 41 6 chr10 40907062 40907572 -99409193 + Tigger3(Golem) DNA MER2_type 2500 3027 -2 1483 230 66 78 chr10 40907573 40908017 -99408748 + L1ME LINE L1 5023 5471 -1470 2272 105 0 0 chr10 40908017 40908312 -99408453 + AluSx SINE Alu 2 296 -16 1483 230 66 78 chr10 40908312 40908428 -99408337 + L1ME LINE L1 5471 5587 -1354 2017 135 14 46 chr10 40908428 40908776 -99407989 - MER1B DNA MER1_type 0 337 1 1483 230 66 78 chr10 40908776 40908998 -99407767 + L1ME LINE L1 5587 5797 -1144 1055 149 0 6 chr10 40909137 40909298 -99407467 + AluSp SINE Alu 150 309 -4 988 244 30 3 chr10 40909318 40909617 -99407148 + L1ME LINE L1 6053 6359 -600 1125 188 10 10 chr10 41009694 41009891 -99306874 - AluJo SINE Alu -115 197 1 836 240 218 3 chr10 41009892 41010263 -99306502 - L1MC4 LINE L1 -1129 6913 6463 606 236 62 25 chr10 41010569 41010811 -99305954 - L1M4 LINE L1 -2406 3740 3490 2050 144 20 0 chr10 41011401 41011699 -99305066 - AluSx SINE Alu -8 304 1 180 0 0 0 chr10 41014715 41014735 -99302030 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1963 174 0 0 chr10 41014735 41015022 -99301743 - AluSx SINE Alu -25 287 1 1449 178 13 80 chr10 41015766 41016080 -99300685 - AluJb SINE Alu -17 295 3 300 242 0 78 chr10 41016184 41016312 -99300453 + L1ME3 LINE L1 5990 6107 -55 468 0 0 0 chr10 41016733 41016785 -99299980 + (CA)n Simple_repeat Simple_repeat 2 53 0 28 29 0 0 chr10 41017786 41017821 -99298944 + AT_rich Low_complexity Low_complexity 1 35 0 391 174 35 0 chr10 41017833 41017919 -99298846 - Charlie7 DNA MER1_type -2473 139 51 1637 148 0 0 chr10 41018401 41018644 -99298121 + AluSx SINE Alu 63 305 -7 2108 115 17 0 chr10 41018744 41019039 -99297726 + AluSq SINE Alu 1 300 -13 187 0 0 158 chr10 41019039 41019185 -99297580 + (CAAGA)n Simple_repeat Simple_repeat 4 126 0 800 76 83 30 chr10 41019419 41019551 -99297214 + MER85 DNA T2_type 1 139 0 538 270 43 33 chr10 41019555 41019766 -99296999 + L1M4 LINE L1 611 823 -5719 255 223 32 21 chr10 41019804 41019898 -99296867 + L1M4 LINE L1 820 914 -5628 767 62 0 0 chr10 41019916 41020012 -99296753 + AluY SINE Alu 202 297 -14 916 207 64 0 chr10 41020017 41020220 -99296545 + L1M4 LINE L1 1800 2015 -4631 397 133 53 0 chr10 41020354 41020429 -99296336 + L1MA3 LINE L1 6032 6110 -195 28345 95 9 10 chr10 41020432 41025785 -99290980 - L1PA7 LINE L1 0 7592 1445 1175 235 60 22 chr10 41025778 41026195 -99290570 + L1M4 LINE L1 4483 4915 -1729 * 594 174 65 14 chr10 41026195 41026333 -99290432 + MLT1A1 LTR MaLR 1 145 -220 2411 99 3 0 chr10 41026622 41026926 -99289839 + AluSp SINE Alu 1 305 -8 1408 210 100 19 chr10 41026949 41027378 -99289387 + L1MC4 LINE L1 6464 6927 -1115 3190 242 60 44 chr10 41027585 41029792 -99286973 + L1MB2 LINE L1 330 2692 -3952 2183 112 0 43 chr10 41029792 41030114 -99286651 + AluSg SINE Alu 1 308 -2 3190 242 60 44 chr10 41030114 41030366 -99286399 + L1MB2 LINE L1 2692 2938 -3706 * 4028 189 36 24 chr10 41030365 41030929 -99285836 + L1MB2 LINE L1 5119 5675 -994 8023 72 11 5 chr10 41030929 41031993 -99284772 + MER11C LTR ERVK 1 1071 0 4028 189 36 24 chr10 41031993 41032777 -99283988 + L1MB2 LINE L1 5675 6627 -42 843 240 52 0 chr10 41032800 41033087 -99283678 + L1MB5 LINE L1 4081 4401 -1745 758 194 31 6 chr10 41033090 41033250 -99283515 - MER58B DNA MER1_type -39 302 139 609 202 85 48 chr10 41033250 41033522 -99283243 + L1MB5 LINE L1 4390 4671 -1475 2778 164 26 56 chr10 41033524 41034146 -99282619 + L1MB5 LINE L1 5566 6168 -6 2398 85 0 19 chr10 41034313 41034629 -99282136 - AluSg SINE Alu 0 310 1 1207 221 111 3 chr10 41034879 41035186 -99281579 - MER58B DNA MER1_type 0 341 2 1833 111 87 17 chr10 41035734 41036022 -99280743 - AluSg SINE Alu -2 308 1 1676 127 14 40 chr10 41038198 41038356 -99278409 + L1PB3 LINE L1 5878 6028 -126 2064 130 10 0 chr10 41038356 41038655 -99278110 + AluSq SINE Alu 1 302 -11 1676 127 14 40 chr10 41038655 41038771 -99277994 + L1PB3 LINE L1 6028 6145 -9 24 0 0 0 chr10 41038778 41038802 -99277963 + AT_rich Low_complexity Low_complexity 1 24 0 2359 102 0 0 chr10 41039021 41039325 -99277440 - AluSg SINE Alu -6 304 1 1993 145 0 3 chr10 41039377 41039680 -99277085 - AluSx SINE Alu -10 302 1 1500 154 135 0 chr10 41040910 41041176 -99275589 - AluSx SINE Alu -10 302 1 2065 125 7 10 chr10 41042487 41042791 -99273974 - AluSx SINE Alu -9 303 1 2050 128 3 13 chr10 41043191 41043495 -99273270 + AluSc SINE Alu 1 301 -8 2044 217 100 14 chr10 41043507 41044031 -99272734 + MER68 LTR ERV1 11 595 0 1584 155 7 69 chr10 41044045 41044336 -99272429 - AluJo SINE Alu -39 273 1 293 291 0 58 chr10 41044372 41044458 -99272307 + HERVL68 LTR ERVL 346 426 -2611 2445 194 60 39 chr10 41044608 41045253 -99271512 + HERVL68 LTR ERVL 594 1252 -1785 5920 119 34 28 chr10 41045580 41046471 -99270294 + MER49 LTR ERV1 1 899 -24 2403 96 0 0 chr10 41046471 41046774 -99269991 - AluSq SINE Alu -10 303 1 5920 119 34 28 chr10 41046774 41046796 -99269969 + MER49 LTR ERV1 899 919 -4 1680 107 25 0 chr10 41047054 41047297 -99269468 - L1PA13 LINE L1 0 6163 5915 1030 145 38 0 chr10 41047297 41047456 -99269309 + L1PA12 LINE L1 1949 2113 -5468 600 290 67 9 chr10 41047492 41047995 -99268770 + MLT1G LTR MaLR 1 561 -29 185 278 42 0 chr10 41048180 41048252 -99268513 - MIR SINE MIR -10 252 178 207 0 0 0 chr10 41048532 41048555 -99268210 + (CA)n Simple_repeat Simple_repeat 2 24 0 3827 45 5 1 chr10 41048990 41049503 -99267262 - L1PA4 LINE L1 -27 6128 5608 373 141 113 0 chr10 41049510 41049581 -99267184 - MSTD LTR MaLR -2 394 316 32 26 0 0 chr10 41049809 41049848 -99266917 + AT_rich Low_complexity Low_complexity 1 39 0 491 285 96 56 chr10 41050066 41050567 -99266198 + HSATI Satellite Satellite 44 564 -13 299 331 17 6 chr10 41050577 41050752 -99266013 + L1M4 LINE L1 3574 3750 -2396 614 166 40 108 chr10 41050806 41051029 -99265736 + MER4B-int LTR ERV1 3638 3845 -2486 213 39 0 0 chr10 41052025 41052051 -99264714 + (A)n Simple_repeat Simple_repeat 1 26 0 326 173 12 37 chr10 41052082 41052163 -99264602 + MER4B-int LTR ERV1 2406 2484 -4274 502 233 61 28 chr10 41052245 41052425 -99264340 + MER4B-int LTR ERV1 3545 3730 -2868 613 51 39 13 chr10 41052436 41052514 -99264251 + MADE1 DNA Mariner 1 80 0 412 138 0 53 chr10 41052583 41052677 -99264088 + MER4B-int LTR ERV1 3728 3816 -2782 2069 153 114 0 chr10 41052936 41053296 -99263469 + MSTA LTR MaLR 1 401 -27 2289 101 0 0 chr10 41053342 41053630 -99263135 - AluSg SINE Alu -22 288 1 266 128 0 0 chr10 41053630 41053669 -99263096 + MSTA LTR MaLR 390 428 0 9523 165 31 28 chr10 41053669 41054077 -99262688 + MSTA-int LTR MaLR 1 406 -1245 1454 192 91 0 chr10 41054077 41054363 -99262402 + AluJb SINE Alu 1 312 0 9523 165 31 28 chr10 41054363 41055600 -99261165 + MSTA-int LTR MaLR 406 1651 0 2593 162 31 0 chr10 41055600 41056014 -99260751 + MSTA LTR MaLR 1 427 -1 250 318 9 36 chr10 41056288 41056398 -99260367 + MIR SINE MIR 41 147 -61 337 332 80 36 chr10 41056593 41056843 -99259922 - MIR SINE MIR -1 261 1 683 218 83 10 chr10 41057489 41057682 -99259083 - L1MC2 LINE L1 0 6344 6138 3154 112 27 33 chr10 41057952 41058255 -99258510 - MER49 LTR ERV1 -415 508 208 2411 78 3 0 chr10 41058255 41058551 -99258214 - AluY SINE Alu -14 297 1 3154 112 27 33 chr10 41058551 41058758 -99258007 - MER49 LTR ERV1 -715 208 1 459 230 133 12 chr10 41059998 41060163 -99256602 + MLT1C LTR MaLR 283 467 0 352 214 10 10 chr10 41060338 41060436 -99256329 + (TA)n Simple_repeat Simple_repeat 2 99 0 1890 132 3 17 chr10 41060454 41060606 -99256159 - AluSx SINE Alu -27 285 137 1896 122 8 0 chr10 41060606 41060868 -99255897 - AluSq SINE Alu -11 302 39 1890 132 3 17 chr10 41060868 41061004 -99255761 - AluSx SINE Alu -175 137 1 231 226 43 0 chr10 41061363 41061417 -99255348 - MER5A DNA MER1_type -82 106 41 2089 133 0 0 chr10 41061567 41061861 -99254904 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 41061861 41061885 -99254880 + AT_rich Low_complexity Low_complexity 1 24 0 979 143 0 0 chr10 41063931 41064078 -99252687 - L1PA16 LINE L1 -9 6157 6011 2020 153 10 0 chr10 41064967 41065275 -99251490 - AluSx SINE Alu -1 311 1 1743 125 91 8 chr10 41065376 41065660 -99251105 + AluSg1 SINE Alu 1 309 0 1889 115 72 0 chr10 41065936 41066214 -99250551 + AluSq SINE Alu 1 298 -15 1938 118 7 4 chr10 41066558 41066830 -99249935 + AluSx SINE Alu 1 273 -39 186 43 0 0 chr10 41066838 41066861 -99249904 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2581 74 0 0 chr10 41068895 41069206 -99247559 - AluY SINE Alu 0 311 1 787 103 0 28 chr10 41069206 41069313 -99247452 - FRAM SINE Alu -19 157 54 907 197 11 115 chr10 41069573 41069946 -99246819 - MLT1A1 LTR MaLR 0 396 39 1777 117 24 0 chr10 41069954 41070223 -99246542 - AluSx SINE Alu 0 301 27 240 128 106 21 chr10 41070227 41070274 -99246491 - AluSx SINE Alu -251 51 1 * 256 111 0 44 chr10 41070274 41070315 -99246450 - MLT1A1 LTR MaLR -386 42 4 1786 264 39 0 chr10 41071245 41071734 -99245031 - LTR53 LTR ERVL -1 518 11 2389 173 69 32 chr10 41071896 41072400 -99244365 - L1MC2 LINE L1 -11 6333 5811 * 3509 230 111 34 chr10 41072385 41073151 -99243614 - L1M4 LINE L1 -1819 4327 3435 2002 127 0 20 chr10 41073151 41073443 -99243322 - AluSg SINE Alu -24 286 1 3509 230 111 34 chr10 41073443 41073871 -99242894 - L1M4 LINE L1 -2711 3435 3041 365 262 57 8 chr10 41074274 41074396 -99242369 + Zaphod DNA AcHobo 3904 4031 0 243 88 0 0 chr10 41074781 41074815 -99241950 + (CA)n Simple_repeat Simple_repeat 1 34 0 337 253 98 41 chr10 41074815 41074993 -99241772 + L1MD3 LINE L1 6153 7796 -12 191 35 0 35 chr10 41077721 41077750 -99239015 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1034 231 107 28 chr10 41078347 41078771 -99237994 + MLT1B LTR MaLR 1 390 0 31 26 0 0 chr10 41078921 41078959 -99237806 + AT_rich Low_complexity Low_complexity 1 38 0 1767 250 67 59 chr10 41079200 41080068 -99236697 - L1MEc LINE L1 -1404 4811 3937 4437 192 93 40 chr10 41080088 41081288 -99235477 - MER45R DNA AcHobo 0 1581 318 823 246 20 30 chr10 41081352 41081555 -99235210 - MER45R DNA AcHobo -1377 204 4 1115 261 105 16 chr10 41081557 41082280 -99234485 - L1MEc LINE L1 -2279 3936 3101 276 206 33 76 chr10 41082301 41082485 -99234280 + (CATATA)n Simple_repeat Simple_repeat 4 179 0 438 190 66 33 chr10 41082495 41082616 -99234149 + L1M4 LINE L1 3034 3158 -2988 1781 256 79 40 chr10 41082673 41083487 -99233278 - L1MEc LINE L1 -3171 3044 2200 3294 269 68 48 chr10 41083522 41084273 -99232492 - L1MEc LINE L1 -4401 1995 1261 2436 78 7 0 chr10 41084273 41084580 -99232185 - AluSc SINE Alu 0 309 1 3294 269 68 48 chr10 41084580 41084711 -99232054 - L1MEc LINE L1 -5135 1261 1134 1674 136 16 73 chr10 41084711 41085027 -99231738 - AluJb SINE Alu -2 310 13 3294 269 68 48 chr10 41085027 41085744 -99231021 - L1MEc LINE L1 -5262 1134 362 1612 271 94 13 chr10 41085744 41086286 -99230479 + L1M4b LINE L1 347 932 -5927 2424 237 67 13 chr10 41086404 41086962 -99229803 + L1M4b LINE L1 936 1462 -5393 2192 114 13 0 chr10 41086962 41087261 -99229504 + AluSx SINE Alu 1 303 -9 2424 237 67 13 chr10 41087261 41087420 -99229345 + L1M4b LINE L1 1462 1611 -5244 2167 120 0 13 chr10 41087420 41087737 -99229028 + AluSq SINE Alu 1 313 0 2424 237 67 13 chr10 41087737 41087955 -99228810 + L1M4b LINE L1 1611 1901 -4954 491 198 42 0 chr10 41087957 41088053 -99228712 + U6 snRNA snRNA 2 101 -6 516 192 48 41 chr10 41088098 41088244 -99228521 + L1M4b LINE L1 2029 2175 -4784 186 296 111 25 chr10 41088331 41088412 -99228353 - MIR SINE MIR -97 165 78 2551 47 3 0 chr10 41088425 41088723 -99228042 - L1PA4 LINE L1 -3 6152 5854 320 328 85 10 chr10 41088785 41089080 -99227685 + L1M4b LINE L1 2265 2683 -4455 1553 199 17 23 chr10 41089080 41089382 -99227383 + AluJb SINE Alu 1 300 -12 180 125 0 0 chr10 41089415 41089447 -99227318 + (A)n Simple_repeat Simple_repeat 1 32 0 2113 106 27 3 chr10 41089453 41089745 -99227020 + AluSx SINE Alu 1 299 -13 386 235 62 108 chr10 41089769 41089911 -99226854 + L1MEc LINE L1 1731 1878 -4518 977 144 88 6 chr10 41089911 41090093 -99226672 + L1PA8A LINE L1 5946 6140 0 386 235 62 108 chr10 41090093 41090124 -99226641 + L1MEc LINE L1 1878 1909 -4487 1377 138 47 30 chr10 41090124 41090356 -99226409 - MER46A DNA MER2_type 0 236 1 386 235 62 108 chr10 41090356 41090548 -99226217 + L1MEc LINE L1 1909 2083 -4313 29 47 0 0 chr10 41090564 41090607 -99226158 + AT_rich Low_complexity Low_complexity 1 43 0 1025 191 80 0 chr10 41090612 41090811 -99225954 + L1PB4 LINE L1 5942 6156 0 328 185 15 15 chr10 41090913 41090978 -99225787 - Tigger5 DNA MER2_type 0 2323 2259 229 227 15 15 chr10 41091045 41091111 -99225654 - Tigger5 DNA MER2_type -7 2316 2251 * 308 218 0 0 chr10 41091080 41091135 -99225630 - Tigger5 DNA MER2_type -2268 55 1 6332 250 84 31 chr10 41091174 41092412 -99224353 + L1MEc LINE L1 2238 3410 -2805 1881 156 7 16 chr10 41092412 41092720 -99224045 + AluJb SINE Alu 5 309 -3 6332 250 84 31 chr10 41092720 41093534 -99223231 + L1MEc LINE L1 3410 4180 -2035 1447 156 120 18 chr10 41093534 41093810 -99222955 + AluSg SINE Alu 1 304 -6 6332 250 84 31 chr10 41093810 41094312 -99222453 + L1MEc LINE L1 4180 4654 -1561 2058 132 13 7 chr10 41094312 41094615 -99222150 + AluSg SINE Alu 1 305 -5 6332 250 84 31 chr10 41094615 41095037 -99221728 + L1MEc LINE L1 4654 5407 -808 2353 258 90 38 chr10 41095031 41095476 -99221289 - L1M4 LINE L1 -1820 4326 3906 * 1997 145 10 3 chr10 41095476 41095779 -99220986 - AluSx SINE Alu -7 305 1 2353 258 90 38 chr10 41095779 41096230 -99220535 - L1M4 LINE L1 -2240 3906 3383 2715 167 75 60 chr10 41096240 41096518 -99220247 + L1MC3 LINE L1 6171 6443 -1342 2124 145 0 0 chr10 41096518 41096829 -99219936 + AluSx SINE Alu 1 311 -1 2715 167 75 60 chr10 41096829 41097233 -99219532 + L1MC3 LINE L1 6443 6863 -922 2882 186 53 9 chr10 41097248 41097853 -99218912 + L1MC3 LINE L1 7124 8026 -16 3108 216 28 45 chr10 41097874 41097926 -99218839 + L1MB8 LINE L1 5352 5403 -775 2178 110 0 3 chr10 41097926 41098225 -99218540 + AluSg1 SINE Alu 1 298 -11 3108 216 28 45 chr10 41098225 41098889 -99217876 + L1MB8 LINE L1 5403 6077 -101 2151 111 3 3 chr10 41098889 41099178 -99217587 + AluSx SINE Alu 1 289 -23 1668 108 62 88 chr10 41099186 41099493 -99217272 + AluSx SINE Alu 1 299 -13 3108 216 28 45 chr10 41099493 41099594 -99217171 + L1MB8 LINE L1 6084 6165 -13 227 319 83 43 chr10 41099625 41099879 -99216886 - L1M4 LINE L1 -1796 5161 4898 2128 93 4 4 chr10 41099950 41100254 -99216511 - AluSc SINE Alu 0 304 1 3136 209 79 28 chr10 41100312 41100337 -99216428 - L1MD2 LINE L1 -12 6347 6325 2219 135 0 0 chr10 41100337 41100649 -99216116 - AluJb SINE Alu 0 312 1 3136 209 79 28 chr10 41100649 41101046 -99215719 - L1MD2 LINE L1 -34 6325 5950 959 247 101 45 chr10 41101046 41101443 -99215322 + LTR52 LTR ERVL 1 419 -2 3136 209 79 28 chr10 41101443 41101846 -99214919 - L1MD2 LINE L1 -409 5950 5479 654 247 73 15 chr10 41101882 41102141 -99214624 - L1M4 LINE L1 -4946 2013 1740 309 162 27 14 chr10 41102201 41102275 -99214490 - L1M4 LINE L1 -5412 1447 1373 381 261 114 23 chr10 41102318 41102494 -99214271 + L1MB4 LINE L1 15 206 -6336 1712 238 20 47 chr10 41102494 41103170 -99213595 + L1MB4 LINE L1 1764 2456 -4188 2036 145 0 7 chr10 41103170 41103467 -99213298 + AluSx SINE Alu 3 297 -15 1712 238 20 47 chr10 41103467 41103634 -99213131 + L1MB4 LINE L1 2456 2626 -4018 222 0 79 0 chr10 41103634 41103672 -99213093 + T-rich Low_complexity Low_complexity 1 41 0 1556 159 50 4 chr10 41103672 41103930 -99212835 - AluJo SINE Alu -32 280 11 1712 238 20 47 chr10 41103930 41104289 -99212476 + L1MB4 LINE L1 2624 3043 -3601 1209 186 67 42 chr10 41104291 41104576 -99212189 + AluJb SINE Alu 1 292 -20 204 40 0 0 chr10 41104586 41104611 -99212154 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 835 178 74 35 chr10 41104765 41104967 -99211798 + L1MB4 LINE L1 5194 5403 -1241 571 240 39 7 chr10 41104980 41105134 -99211631 + L1MB5 LINE L1 5897 6055 -119 231 174 0 130 chr10 41105138 41105207 -99211558 + L1MB4 LINE L1 5404 5463 -1181 365 204 108 0 chr10 41105208 41105301 -99211464 + L1MB4 LINE L1 5528 5630 -1014 2147 112 18 0 chr10 41105308 41105594 -99211171 + AluSx SINE Alu 1 291 -21 1927 219 135 9 chr10 41105620 41106159 -99210606 + L1MB4 LINE L1 6070 6676 -2 6206 233 58 68 chr10 41106174 41106241 -99210524 - L1M4c LINE L1 -1222 5160 5094 1475 192 40 51 chr10 41106241 41106616 -99210149 - MLT1A2 LTR MaLR 0 374 4 6206 233 58 68 chr10 41106616 41106740 -99210025 - L1M4c LINE L1 -1288 5094 4970 2970 179 62 2 chr10 41106740 41107259 -99209506 - MER44D DNA MER2_type 0 605 1 6206 233 58 68 chr10 41107259 41107752 -99209013 - L1M4c LINE L1 -1412 4970 4474 2183 106 22 19 chr10 41107752 41108063 -99208702 - AluSp SINE Alu -1 312 1 6206 233 58 68 chr10 41108063 41108696 -99208069 - L1M4c LINE L1 -1908 4474 3836 2060 134 0 7 chr10 41108696 41108995 -99207770 + AluSg SINE Alu 1 297 -13 6206 233 58 68 chr10 41108995 41109261 -99207504 - L1M4c LINE L1 -2546 3836 3569 2133 128 0 10 chr10 41109261 41109567 -99207198 - AluSx SINE Alu -9 303 1 6206 233 58 68 chr10 41109567 41110287 -99206478 - L1M4c LINE L1 -2813 3569 2880 1924 159 24 0 chr10 41110287 41110583 -99206182 - AluSx SINE Alu -9 303 1 6206 233 58 68 chr10 41110583 41110976 -99205789 - L1M4c LINE L1 -3502 2880 2485 768 186 6 25 chr10 41111007 41111168 -99205597 + L1M1 LINE L1 19 176 -7389 4376 110 82 20 chr10 41111168 41111859 -99204906 + L1MA2 LINE L1 5571 6304 0 1005 209 223 0 chr10 41111863 41112213 -99204552 - L1M4c LINE L1 -3921 2461 2034 1437 238 114 24 chr10 41112218 41112605 -99204160 - L1M4c LINE L1 -4384 1998 1647 4182 50 2 10 chr10 41112605 41113144 -99203621 + L1PA4 LINE L1 5657 6155 0 1437 238 114 24 chr10 41113144 41113354 -99203411 - L1M4c LINE L1 -4735 1647 1228 638 326 108 6 chr10 41113369 41113908 -99202857 + L2 LINE L2 2541 3141 -172 189 74 0 0 chr10 41113919 41113946 -99202819 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2055 129 23 0 chr10 41113968 41114270 -99202495 - AluSx SINE Alu -3 309 1 1890 114 0 52 chr10 41116468 41116776 -99199989 + AluSq SINE Alu 1 292 -21 1972 124 43 7 chr10 41116914 41117196 -99199569 + AluSq SINE Alu 1 292 -21 441 282 201 6 chr10 41117203 41117551 -99199214 + L1M4 LINE L1 4557 4972 -1174 472 219 26 123 chr10 41117707 41117753 -99199012 - MER58B DNA MER1_type -2080 340 291 2030 126 30 0 chr10 41117753 41118055 -99198710 + AluSx SINE Alu 1 311 -1 472 219 26 123 chr10 41118055 41118163 -99198602 - MER58B DNA MER1_type -2129 291 201 237 305 38 15 chr10 41118167 41118298 -99198467 + L1ME3 LINE L1 5989 6122 -40 1798 95 7 102 chr10 41118361 41118666 -99198099 + AluSg SINE Alu 27 302 -8 2317 95 0 0 chr10 41118682 41118976 -99197789 + AluSc SINE Alu 1 294 -15 2072 139 0 0 chr10 41119359 41119668 -99197097 + AluSx SINE Alu 1 309 -3 201 239 183 14 chr10 41120354 41120425 -99196340 + MIR SINE MIR 21 103 -105 2233 81 34 0 chr10 41120492 41120787 -99195978 - AluSq SINE Alu -8 305 1 1596 163 28 21 chr10 41122428 41122716 -99194049 + AluJb SINE Alu 1 290 -22 2236 112 0 3 chr10 41122851 41123154 -99193611 + AluSc SINE Alu 1 302 -7 1132 238 48 18 chr10 41123201 41123552 -99193213 - L1ME1 LINE L1 -1 6165 5809 1910 192 139 22 chr10 41123552 41124042 -99192723 - LTR10B LTR ERV1 0 547 1 346 265 20 0 chr10 41124042 41124144 -99192621 - L1ME1 LINE L1 -2230 5812 5709 2144 183 96 30 chr10 41124234 41124703 -99192062 - MLT2B1 LTR ERVL 0 520 21 2421 96 0 3 chr10 41124714 41125028 -99191737 - AluSp SINE Alu 0 313 1 4882 166 16 36 chr10 41125112 41126158 -99190607 - L1MA5 LINE L1 0 6300 5234 1764 170 3 0 chr10 41126158 41126467 -99190298 - AluJb SINE Alu 0 310 1 1864 130 76 0 chr10 41126476 41126644 -99190121 - AluSc SINE Alu -12 297 98 351 0 0 0 chr10 41126644 41126683 -99190082 + (TG)n Simple_repeat Simple_repeat 2 40 0 1864 130 76 0 chr10 41126683 41126790 -99189975 - AluSc SINE Alu -211 98 1 2027 118 4 4 chr10 41126800 41127118 -99189647 - AluY SINE Alu 0 318 1 4882 166 16 36 chr10 41127118 41127370 -99189395 - L1MA5 LINE L1 -1083 5217 4869 26 30 0 0 chr10 41127421 41127454 -99189311 + AT_rich Low_complexity Low_complexity 1 33 0 517 290 147 13 chr10 41127478 41127792 -99188973 - LTR50 LTR ERVL -3 792 437 593 160 50 8 chr10 41127937 41128056 -99188709 + L1MB7 LINE L1 6041 6164 -20 671 86 0 0 chr10 41128068 41128149 -99188616 - AluSc SINE Alu -16 293 213 628 236 51 77 chr10 41128238 41128670 -99188095 + LTR15 LTR ERV1 112 493 0 1428 180 38 55 chr10 41128672 41129072 -99187693 + HERV15 LTR ERV1 3 395 -8340 213 94 0 0 chr10 41129247 41129279 -99187486 + (TG)n Simple_repeat Simple_repeat 2 33 0 587 224 56 87 chr10 41129311 41129632 -99187133 - MLT2B1 LTR ERVL -40 480 100 1736 207 126 2 chr10 41129712 41130133 -99186632 - L1PB4 LINE L1 0 6156 5684 1805 166 0 0 chr10 41130134 41130423 -99186342 - AluJo SINE Alu -12 300 12 1234 128 0 0 chr10 41130425 41130604 -99186161 - AluSg/x SINE Alu -14 296 118 42588 39 24 4 chr10 41130604 41136613 -99180152 - L1PA2 LINE L1 -15 6140 3 418 103 162 0 chr10 41136629 41136697 -99180068 - AluY SINE Alu -179 132 54 1199 144 0 16 chr10 41136698 41136886 -99179879 - AluSg SINE Alu -125 185 1 987 116 94 107 chr10 41136887 41137084 -99179681 - L1PB4 LINE L1 -476 5680 5485 855 99 0 0 chr10 41137084 41137195 -99179570 - HY1 scRNA scRNA -1 111 1 987 116 94 107 chr10 41137195 41137221 -99179544 - L1PB4 LINE L1 -671 5485 5460 520 168 196 0 chr10 41137222 41137329 -99179436 - MLT2B2 LTR ERVL -387 128 1 243 277 119 10 chr10 41137335 41137436 -99179329 - MIR SINE MIR -57 151 40 874 242 64 64 chr10 41138247 41138538 -99178227 + L1MEc LINE L1 36 329 -6067 1898 169 3 3 chr10 41138538 41138846 -99177919 + AluSx SINE Alu 1 308 -4 874 242 64 64 chr10 41138846 41138913 -99177852 + L1MEc LINE L1 328 394 -6002 1808 176 67 8 chr10 41139932 41140290 -99176475 + MLT1B LTR MaLR 1 379 -11 1574 80 0 10 chr10 41140338 41140537 -99176228 + MER107 DNA MER1_type 1 197 0 1609 171 30 23 chr10 41140614 41140755 -99176010 + AluJb SINE Alu 1 140 -172 2015 124 21 3 chr10 41140755 41141046 -99175719 + AluSx SINE Alu 1 296 -16 1609 171 30 23 chr10 41141046 41141208 -99175557 + AluJb SINE Alu 140 306 -6 21 0 0 0 chr10 41141511 41141532 -99175233 + AT_rich Low_complexity Low_complexity 1 21 0 2128 118 3 0 chr10 41141535 41141845 -99174920 + AluSp SINE Alu 1 311 0 1251 218 51 11 chr10 41141958 41142233 -99174532 - AluJo SINE Alu -26 286 1 2245 107 3 0 chr10 41142890 41143188 -99173577 + AluSp SINE Alu 1 299 -14 317 280 75 0 chr10 41143200 41143307 -99173458 - L1M4b LINE L1 -6737 122 8 1800 134 47 30 chr10 41143311 41143609 -99173156 - AluSx SINE Alu -9 303 1 2356 106 0 6 chr10 41143623 41143935 -99172830 - AluSg SINE Alu 0 310 1 483 206 10 0 chr10 41143938 41144040 -99172725 - L1MEc LINE L1 -1980 4235 4133 1113 90 0 0 chr10 41144042 41144176 -99172589 - AluSq/x SINE Alu -178 134 1 2315 107 0 0 chr10 41144210 41144510 -99172255 - AluSg SINE Alu -5 305 6 1444 186 40 193 chr10 41144512 41144909 -99171856 - L1MEc LINE L1 -2848 3367 2911 1976 137 7 3 chr10 41144909 41145201 -99171564 - AluSg SINE Alu -17 293 1 1444 186 40 193 chr10 41145201 41145238 -99171527 - L1MEc LINE L1 -3304 2911 2870 1446 197 44 7 chr10 41145238 41145533 -99171232 + AluJo SINE Alu 5 310 -2 1444 186 40 193 chr10 41145533 41145870 -99170895 - L1MEc LINE L1 -3345 2870 2754 2158 125 3 3 chr10 41145870 41146175 -99170590 - AluSp SINE Alu -8 305 1 1444 186 40 193 chr10 41146175 41146318 -99170447 - L1MEc LINE L1 -3461 2754 2591 * 4086 218 82 38 chr10 41146316 41146671 -99170094 - L1MEc LINE L1 -4993 1272 934 2208 122 0 0 chr10 41146671 41146966 -99169799 + AluSg SINE Alu 1 295 -15 4086 218 82 38 chr10 41146966 41147154 -99169611 - L1MEc LINE L1 -5331 934 756 2132 115 10 0 chr10 41147154 41147449 -99169316 - AluSx SINE Alu -14 298 1 4086 218 82 38 chr10 41147449 41148189 -99168576 - L1MEc LINE L1 -5509 756 41 739 181 0 0 chr10 41148189 41148316 -99168449 - AluSg/x SINE Alu -4 308 182 4344 60 33 56 chr10 41148338 41149397 -99167368 + MER11A LTR ERVK 1 1265 -1 1084 124 0 0 chr10 41149397 41149542 -99167223 - AluSq/x SINE Alu -167 145 1 1094 216 14 106 chr10 41149552 41149607 -99167158 + L1MC4 LINE L1 7655 7713 -329 1892 148 0 26 chr10 41149607 41149911 -99166854 + AluSc SINE Alu 1 296 -13 1094 216 14 106 chr10 41149911 41150213 -99166552 + L1MC4 LINE L1 7713 7971 -71 1919 146 43 0 chr10 41150213 41150494 -99166271 - AluSg SINE Alu -17 293 1 1094 216 14 106 chr10 41150494 41150552 -99166213 + L1MC4 LINE L1 7971 8033 -9 1950 141 3 10 chr10 41150552 41150850 -99165915 + AluSx SINE Alu 1 296 -16 2279 113 0 3 chr10 41150934 41151236 -99165529 + AluSq SINE Alu 1 301 -12 234 263 53 96 chr10 41151238 41151447 -99165318 + L1ME3A LINE L1 5963 6162 -8 403 118 108 49 chr10 41151748 41151850 -99164915 - MER54A LTR ERVL -786 115 8 2185 111 0 0 chr10 41151990 41152279 -99164486 - AluSc SINE Alu -20 289 1 4813 136 27 21 chr10 41152318 41153092 -99163673 - MER4E LTR ERV1 0 779 1 3110 185 52 23 chr10 41153227 41153255 -99163510 + MER67C LTR ERV1 3 29 -681 2169 114 0 10 chr10 41153255 41153553 -99163212 + AluSg1 SINE Alu 1 295 -14 3110 185 52 23 chr10 41153553 41154212 -99162553 + MER67C LTR ERV1 29 710 0 206 313 16 0 chr10 41154231 41154295 -99162470 + (TATG)n Simple_repeat Simple_repeat 1 65 0 1661 186 62 3 chr10 41154390 41154713 -99162052 + MER2 DNA MER2_type 2 343 -1 307 216 93 174 chr10 41155275 41155609 -99161156 - L1M2 LINE L1 -5835 1014 708 6364 148 26 9 chr10 41156496 41158283 -99158482 - L1MA4 LINE L1 -2 6298 4543 1694 149 78 11 chr10 41158283 41158564 -99158201 - AluSx SINE Alu -12 300 1 6364 148 26 9 chr10 41158564 41158714 -99158051 - L1MA4 LINE L1 -1757 4543 4397 2249 104 3 3 chr10 41158714 41159012 -99157753 - AluSp SINE Alu -15 298 1 6364 148 26 9 chr10 41159012 41159195 -99157570 - L1MA4 LINE L1 -1903 4397 4146 333 197 79 39 chr10 41159745 41159872 -99156893 - L1ME4a LINE L1 -274 5847 5716 369 0 0 0 chr10 41160224 41160265 -99156500 + (TG)n Simple_repeat Simple_repeat 2 42 0 616 308 70 0 chr10 41160358 41160543 -99156222 + Charlie1a DNA MER1_type 1 198 -1257 2219 111 3 3 chr10 41160563 41160861 -99155904 - AluSx SINE Alu -14 298 1 22 0 0 0 chr10 41160870 41160892 -99155873 + AT_rich Low_complexity Low_complexity 1 22 0 500 332 105 9 chr10 41160993 41161258 -99155507 - L2 LINE L2 -250 3063 2777 207 0 0 0 chr10 41161260 41161283 -99155482 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1605 236 19 3 chr10 41161334 41161707 -99155058 - L1M4 LINE L1 -2070 4076 3698 662 254 90 11 chr10 41161713 41161902 -99154863 + MER63A DNA MER1_type 7 210 0 549 299 10 10 chr10 41161902 41162109 -99154656 - L1M4 LINE L1 -2448 3698 3492 3981 174 51 20 chr10 41162111 41162895 -99153870 - L1MB5 LINE L1 -1 6409 5602 1125 229 87 0 chr10 41162931 41163149 -99153616 + MER8 DNA MER2_type 3 239 0 3038 222 71 19 chr10 41163151 41163240 -99153525 - L1MB5 LINE L1 -788 5594 5511 2244 114 3 0 chr10 41163240 41163537 -99153228 + AluSx SINE Alu 1 298 -14 1995 139 0 0 chr10 41163539 41163820 -99152945 + AluSg SINE Alu 1 281 -29 3038 222 71 19 chr10 41163820 41164187 -99152578 - L1MB5 LINE L1 -871 5511 5164 1660 180 44 3 chr10 41164187 41164481 -99152284 + AluJb SINE Alu 1 306 -6 3038 222 71 19 chr10 41164481 41164849 -99151916 - L1MB5 LINE L1 -1218 5164 4723 1493 242 63 21 chr10 41164839 41165115 -99151650 - L1MB5 LINE L1 -3797 2585 2322 * 2259 121 131 31 chr10 41165115 41165462 -99151303 + MSTA LTR MaLR 1 392 -36 2059 118 20 10 chr10 41165462 41165758 -99151007 - AluSx SINE Alu -13 299 1 2259 121 131 31 chr10 41165758 41165798 -99150967 + MSTA LTR MaLR 392 427 -1 1493 242 63 21 chr10 41165798 41166468 -99150297 - L1MB5 LINE L1 -4060 2322 1515 6663 183 29 1 chr10 41166482 41167652 -99149113 - MSTB-int LTR MaLR -446 1205 3 2873 142 9 34 chr10 41167652 41167894 -99148871 - MSTB LTR MaLR 0 426 198 2136 141 0 0 chr10 41167894 41168200 -99148565 - AluSx SINE Alu -4 308 3 2873 142 9 34 chr10 41168200 41168394 -99148371 - MSTB LTR MaLR -228 198 1 1976 137 3 26 chr10 41168473 41168803 -99147962 + AluSx SINE Alu 1 312 0 314 267 17 35 chr10 41168832 41168948 -99147817 - L1MB5 LINE L1 -6248 136 23 779 259 29 38 chr10 41168953 41169269 -99147496 - L1M4 LINE L1 -2636 3510 3198 405 257 72 0 chr10 41169313 41169465 -99147300 - L1M4 LINE L1 -3283 2863 2701 2120 109 3 26 chr10 41169636 41169938 -99146827 - AluSg SINE Alu -15 295 1 2368 92 3 3 chr10 41169948 41170253 -99146512 - AluSp SINE Alu -8 305 1 355 273 85 12 chr10 41170365 41170530 -99146235 - HAL1 LINE L1 -856 1651 1475 2373 78 0 34 chr10 41171244 41171565 -99145200 - AluY SINE Alu -1 310 1 1348 106 0 0 chr10 41171807 41171986 -99144779 + AluY SINE Alu 124 302 -9 2242 112 0 0 chr10 41171988 41172292 -99144473 + AluSx SINE Alu 1 304 -8 242 156 22 0 chr10 41172292 41172337 -99144428 + HAL1b LINE L1 492 537 -811 232 311 0 0 chr10 41172329 41172403 -99144362 + L1M4 LINE L1 2944 3017 -3129 * 21 0 0 31 chr10 41172829 41172844 -99143921 + AT_rich Low_complexity Low_complexity 1 15 -16 1966 142 0 3 chr10 41172844 41173132 -99143633 - AluSx SINE Alu -25 287 1 21 0 0 31 chr10 41173132 41173148 -99143617 + AT_rich Low_complexity Low_complexity 15 31 0 505 191 0 48 chr10 41173166 41173271 -99143494 - AluSg/x SINE Alu -83 226 127 344 303 84 26 chr10 41173710 41173781 -99142984 + L2 LINE L2 3146 3211 -102 2034 161 52 3 chr10 41173781 41174110 -99142655 - MER7A DNA MER2_type -1 345 3 344 303 84 26 chr10 41174110 41174193 -99142572 + L2 LINE L2 3211 3309 -4 2222 113 7 0 chr10 41174963 41175264 -99141501 - AluSp SINE Alu -10 303 1 369 283 0 0 chr10 41175806 41175898 -99140867 + L2 LINE L2 3222 3313 0 1965 124 13 23 chr10 41175916 41176222 -99140543 + AluSx SINE Alu 1 303 -9 2131 129 0 0 chr10 41176732 41177027 -99139738 - AluSx SINE Alu -17 295 1 617 253 173 18 chr10 41181064 41181289 -99135476 + MIR SINE MIR 2 261 -1 1222 204 104 36 chr10 41181450 41181759 -99135006 + MER58B DNA MER1_type 1 330 -11 1774 163 0 30 chr10 41182335 41182636 -99134129 - AluJb SINE Alu -16 296 5 22 0 0 0 chr10 41182949 41182971 -99133794 + AT_rich Low_complexity Low_complexity 1 22 0 1520 161 56 0 chr10 41183033 41183282 -99133483 + AluSx SINE Alu 5 267 -45 375 270 132 17 chr10 41183778 41184155 -99132610 + MLT1H LTR MaLR 32 521 -34 1951 150 6 22 chr10 41184337 41184476 -99132289 + AluSq SINE Alu 1 141 -172 2100 112 14 7 chr10 41184476 41184772 -99131993 + AluSg SINE Alu 1 298 -12 1951 150 6 22 chr10 41184772 41184945 -99131820 + AluSq SINE Alu 141 308 -5 2260 119 0 0 chr10 41185329 41185632 -99131133 - AluSc SINE Alu -5 304 2 2340 87 3 7 chr10 41185633 41185932 -99130833 - AluSg SINE Alu -12 298 1 2012 138 7 7 chr10 41186111 41186408 -99130357 + AluSx SINE Alu 1 297 -15 232 275 0 29 chr10 41186488 41186557 -99130208 + MER88 LTR ERVL 87 153 -311 * 1679 204 101 28 chr10 41186498 41186963 -99129802 - MER74B LTR ERVL -77 545 47 2079 146 0 0 chr10 41187079 41187374 -99129391 + AluSx SINE Alu 1 295 -17 1466 231 0 0 chr10 41187628 41187905 -99128860 + HERVS71 LTR ERV1 7972 8248 -730 464 155 36 12 chr10 41187923 41188007 -99128758 - LTR6A LTR ERV1 -478 86 1 19930 181 5 2 chr10 41188007 41193147 -99123618 - HERVS71 LTR ERV1 -69 8909 3721 14454 217 31 14 chr10 41193154 41196567 -99120198 - HERVS71 LTR ERV1 -5381 3597 4 2401 175 26 36 chr10 41196569 41197072 -99119693 - LTR6B LTR ERV1 0 558 61 716 355 38 14 chr10 41197663 41198086 -99118679 + ERVL LTR ERVL 2644 3076 -2688 1610 142 83 88 chr10 41198454 41198658 -99118107 + L1MA8 LINE L1 5857 6060 -231 1788 92 135 11 chr10 41198658 41198918 -99117847 + AluSg1 SINE Alu 1 292 -17 1610 142 83 88 chr10 41198918 41199121 -99117644 + L1MA8 LINE L1 6060 6262 -29 238 217 0 0 chr10 41199114 41199160 -99117605 - L1MC4 LINE L1 -1341 6701 6656 * 303 102 0 0 chr10 41199150 41199199 -99117566 + L1MA8 LINE L1 6221 6269 -22 1719 172 14 0 chr10 41199199 41199484 -99117281 + AluJb SINE Alu 1 289 -23 2162 116 0 7 chr10 41199490 41199783 -99116982 + AluSp SINE Alu 1 291 -22 2206 122 3 0 chr10 41199795 41200091 -99116674 + AluSq SINE Alu 1 297 -16 1606 188 10 13 chr10 41200100 41200403 -99116362 + AluSx SINE Alu 6 307 -5 2375 104 57 28 chr10 41200433 41200787 -99115978 + THE1B LTR MaLR 1 364 0 973 336 111 32 chr10 41200831 41201697 -99115068 + ERVL LTR ERVL 3572 4505 -1259 1607 175 79 0 chr10 41201828 41202120 -99114645 + MLT1A1 LTR MaLR 49 363 -2 721 160 33 73 chr10 41202194 41202344 -99114421 - AluJo SINE Alu -87 225 82 2380 94 0 3 chr10 41202607 41202905 -99113860 + AluY SINE Alu 1 297 -14 2578 145 14 11 chr10 41202917 41203358 -99113407 + L1MB7 LINE L1 5694 6135 -49 491 257 46 0 chr10 41203386 41203495 -99113270 - MER81 DNA DNA 0 114 1 495 271 93 16 chr10 41203550 41203808 -99112957 + L1MEc LINE L1 980 1224 -4981 824 272 51 12 chr10 41203902 41204233 -99112532 + L1MEc LINE L1 1543 1886 -4510 251 270 130 0 chr10 41204237 41204352 -99112413 - L1M4 LINE L1 -3160 2986 2857 2295 100 0 3 chr10 41204371 41204670 -99112095 - AluSq SINE Alu -14 299 2 4272 164 25 13 chr10 41204756 41204803 -99111962 - L1MB1 LINE L1 0 6168 6123 2359 85 3 0 chr10 41204803 41205098 -99111667 - AluSg SINE Alu -14 296 1 4272 164 25 13 chr10 41205098 41205287 -99111478 - L1MB1 LINE L1 -45 6123 5938 885 170 110 60 chr10 41205287 41205487 -99111278 + MER6B DNA MER2_type 1 210 0 4272 164 25 13 chr10 41205487 41206017 -99110748 - L1MB1 LINE L1 -230 5938 5392 2360 233 106 7 chr10 41206016 41206717 -99110048 - L1M4 LINE L1 -3267 2879 2110 * 2875 150 35 33 chr10 41206718 41206848 -99109917 - L1PA15 LINE L1 -3 6162 6034 2247 115 0 3 chr10 41206848 41207152 -99109613 - AluSx SINE Alu -8 304 2 2875 150 35 33 chr10 41207152 41207540 -99109225 - L1PA15 LINE L1 -131 6034 5643 1828 68 25 0 chr10 41207540 41207756 -99109009 - L1MA1 LINE L1 -1 6301 6059 2190 114 0 3 chr10 41207757 41208054 -99108711 - AluSg SINE Alu -14 296 1 6400 176 14 5 chr10 41208058 41208690 -99108075 - L1MB1 LINE L1 -880 5266 4618 2324 100 7 0 chr10 41208690 41209000 -99107765 - AluSx SINE Alu 0 312 1 6400 176 14 5 chr10 41209000 41209541 -99107224 - L1MB1 LINE L1 -1528 4618 4083 4173 158 60 15 chr10 41209527 41210731 -99106034 - L1P4 LINE L1 -477 5688 4410 * 2068 107 4 7 chr10 41210731 41211044 -99105721 - AluSg SINE Alu 0 312 1 4173 158 60 15 chr10 41211044 41211107 -99105658 - L1P4 LINE L1 -1755 4410 4351 1997 130 58 0 chr10 41211140 41211432 -99105333 - AluSx SINE Alu -3 309 1 1544 159 41 12 chr10 41211436 41211803 -99104962 - L1MC/D LINE L1 -743 5821 5612 622 203 27 59 chr10 41211837 41211943 -99104822 - L1MC/D LINE L1 -4205 2359 2260 2989 83 11 5 chr10 41211943 41212316 -99104449 + THE1C LTR MaLR 1 375 0 622 203 27 59 chr10 41212316 41212396 -99104369 - L1MC/D LINE L1 -4304 2260 2179 2894 190 101 43 chr10 41212407 41213471 -99103294 - L1MCa LINE L1 -4455 2109 894 1113 216 50 11 chr10 41213533 41213816 -99102949 - L1MCa LINE L1 -5162 883 590 437 113 0 0 chr10 41213808 41213870 -99102895 + L1MB7 LINE L1 5558 5619 -561 * 2239 159 151 75 chr10 41213890 41213917 -99102848 + LTR25 LTR ERV1 38 62 -732 2163 118 0 10 chr10 41213917 41214221 -99102544 - AluSx SINE Alu -11 301 1 2239 159 151 75 chr10 41214221 41214854 -99101911 + LTR25 LTR ERV1 62 794 0 1585 214 69 18 chr10 41214872 41215265 -99101500 + L1MB7 LINE L1 5617 6029 -155 752 183 73 74 chr10 41215259 41215298 -99101467 + L1MC3 LINE L1 7541 7579 -463 * 1639 181 24 7 chr10 41215298 41215590 -99101175 - AluJb SINE Alu -15 297 1 752 183 73 74 chr10 41215590 41215776 -99100989 + L1MC3 LINE L1 7579 8035 -7 2017 138 0 24 chr10 41216013 41216311 -99100454 + AluSx SINE Alu 1 291 -21 914 248 110 55 chr10 41216336 41216753 -99100012 + L1MEc LINE L1 1439 1832 -4564 1901 97 89 0 chr10 41216753 41217022 -99099743 + AluSc SINE Alu 1 293 -16 914 248 110 55 chr10 41217022 41217093 -99099672 + L1MEc LINE L1 1832 1898 -4498 2283 94 0 13 chr10 41217093 41217391 -99099374 + AluSx SINE Alu 1 294 -18 914 248 110 55 chr10 41217391 41217646 -99099119 + L1MEc LINE L1 1898 2224 -4172 * 2121 217 91 7 chr10 41217622 41218500 -99098265 + L1MDb LINE L1 4 1073 -5333 2122 106 0 3 chr10 41218500 41218782 -99097983 + AluSx SINE Alu 1 281 -31 2121 217 91 7 chr10 41218782 41218811 -99097954 + L1MDb LINE L1 1073 1098 -5308 1558 222 45 26 chr10 41218824 41219202 -99097563 + L1MA9 LINE L1 3 387 -6781 4292 196 45 19 chr10 41219210 41220022 -99096743 + L1MA9 LINE L1 5813 6678 -655 2207 100 24 0 chr10 41220022 41220313 -99096452 + AluSp SINE Alu 1 298 -15 4292 196 45 19 chr10 41220313 41220942 -99095823 + L1MA9 LINE L1 6678 7289 -44 2232 178 52 24 chr10 41220942 41221363 -99095402 + Tigger2a DNA MER2_type 1 433 -1 5084 136 33 35 chr10 41221363 41221623 -99095142 + Tigger3b DNA MER2_type 322 581 -2447 1776 156 17 13 chr10 41221623 41221924 -99094841 + AluJb SINE Alu 1 302 -10 5084 136 33 35 chr10 41221924 41222060 -99094705 + Tigger3b DNA MER2_type 581 716 -2312 2190 114 7 0 chr10 41222060 41222358 -99094407 + AluSq SINE Alu 1 300 -13 5084 136 33 35 chr10 41222358 41222871 -99093894 + Tigger3b DNA MER2_type 716 1230 -1 1817 230 66 78 chr10 41222872 41223316 -99093449 + L1ME2 LINE L1 4228 4676 -1470 2278 105 0 0 chr10 41223316 41223612 -99093153 + AluSx SINE Alu 2 297 -15 1817 230 66 78 chr10 41223612 41223728 -99093037 + L1ME2 LINE L1 4676 4792 -1354 2159 138 14 46 chr10 41223728 41224076 -99092689 - MER1B DNA MER1_type 0 337 1 1817 230 66 78 chr10 41224076 41224300 -99092465 + L1ME2 LINE L1 4792 5004 -1142 1048 148 0 6 chr10 41224437 41224599 -99092166 + AluSp SINE Alu 150 310 -3 2158 224 64 77 chr10 41224619 41225067 -99091698 + L1ME2 LINE L1 5258 5710 -454 1987 170 66 47 chr10 41225067 41225491 -99091274 - MSTB1 LTR MaLR 0 432 1 2158 224 64 77 chr10 41225491 41225738 -99091027 + L1ME2 LINE L1 5710 5944 -220 682 138 147 0 chr10 41225738 41225854 -99090911 + FLAM_C SINE Alu 1 133 0 2158 224 64 77 chr10 41225854 41225965 -99090800 + L1ME2 LINE L1 5944 6055 -109 7317 42 10 5 chr10 41225977 41226859 -99089906 - L1PA6 LINE L1 -6 6148 5262 300 244 47 87 chr10 41226857 41226916 -99089849 + L1ME1 LINE L1 6043 6103 -61 * 1971 152 52 33 chr10 41226916 41227284 -99089481 - THE1C LTR MaLR 0 375 1 300 244 47 87 chr10 41227284 41227351 -99089414 + L1ME1 LINE L1 6103 6164 0 43207 36 23 2 chr10 41228931 41234952 -99081813 - L1PA2 LINE L1 0 6155 1 38 39 0 0 chr10 41237637 41237689 -99079076 + AT_rich Low_complexity Low_complexity 1 52 0 2300 107 7 0 chr10 41237773 41238083 -99078682 + AluSp SINE Alu 1 312 -1 25 0 0 0 chr10 41238217 41238242 -99078523 + AT_rich Low_complexity Low_complexity 1 25 0 2147 115 3 0 chr10 41238279 41238574 -99078191 - AluSx SINE Alu -16 296 1 2200 108 0 3 chr10 41238574 41238860 -99077905 - AluSx SINE Alu -23 289 5 416 240 0 3 chr10 41240309 41240416 -99076349 + MER2 DNA MER2_type 1 106 -133 673 250 43 0 chr10 41240430 41240621 -99076144 + L1MC4a LINE L1 831 1042 -5381 1044 254 124 39 chr10 41240710 41241282 -99075483 + L1MC4a LINE L1 2047 2667 -4455 1174 185 59 8 chr10 41241288 41241526 -99075239 + AluJb SINE Alu 54 303 -9 429 232 16 24 chr10 41241564 41241689 -99075076 + L1MC4a LINE L1 2693 2816 -4306 544 78 0 165 chr10 41241693 41241796 -99074969 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 2135 132 132 5 chr10 41241833 41242204 -99074561 + MSTA LTR MaLR 1 418 -10 1290 142 49 0 chr10 41242244 41242448 -99074317 - Tigger4(Zombi) DNA MER2_type -2517 214 1 243 275 90 6 chr10 41242469 41242636 -99074129 + L1MC4a LINE L1 2840 3020 -4102 787 128 0 2 chr10 41242641 41242893 -99073872 + AluSx SINE Alu 1 301 -9 774 231 140 24 chr10 41242894 41242955 -99073810 + L1MC4a LINE L1 2977 3030 -3911 2260 107 3 3 chr10 41242955 41243255 -99073510 + AluSg SINE Alu 1 300 -10 774 231 140 24 chr10 41243255 41243522 -99073243 + L1MC4a LINE L1 3030 3343 -3598 246 321 99 43 chr10 41244004 41244378 -99072387 - HAL1b LINE L1 -876 472 78 1992 139 7 7 chr10 41244453 41244748 -99072017 - AluSx SINE Alu -17 295 1 2037 290 97 33 chr10 41245895 41246442 -99070323 + L2 LINE L2 1982 2492 -821 2185 117 0 7 chr10 41246442 41246740 -99070025 - AluSx SINE Alu -16 296 1 2037 290 97 33 chr10 41246740 41247414 -99069351 + L2 LINE L2 2492 3282 -31 2256 105 7 3 chr10 41247435 41247739 -99069026 - AluSx SINE Alu -7 305 1 2461 80 3 0 chr10 41248989 41249288 -99067477 - AluSp SINE Alu -13 300 1 1081 254 45 89 chr10 41249606 41249797 -99066968 + L1MC4a LINE L1 4929 5127 -1814 2158 113 0 0 chr10 41249797 41250097 -99066668 + AluY SINE Alu 1 300 -11 1081 254 45 89 chr10 41250097 41250110 -99066655 + L1MC4a LINE L1 5127 5139 -1802 2295 103 7 0 chr10 41250110 41250411 -99066354 + AluSp SINE Alu 1 303 -10 1081 254 45 89 chr10 41250411 41250487 -99066278 + L1MC4a LINE L1 5139 5217 -1724 2384 90 0 0 chr10 41250487 41250786 -99065979 + AluY SINE Alu 1 299 -12 1081 254 45 89 chr10 41250786 41251065 -99065700 + L1MC4a LINE L1 5217 5465 -1476 2022 99 53 0 chr10 41251065 41251348 -99065417 + AluSg SINE Alu 1 298 -12 839 163 0 14 chr10 41251395 41251536 -99065229 + AluSg/x SINE Alu 137 275 -37 207 0 0 0 chr10 41251544 41251567 -99065198 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 32 0 0 chr10 41251579 41251610 -99065155 + AT_rich Low_complexity Low_complexity 1 31 0 1323 210 241 22 chr10 41251730 41251903 -99064862 + MLT1E1 LTR MaLR 93 227 -427 2361 77 0 0 chr10 41251903 41252189 -99064576 + AluSg SINE Alu 1 286 -24 1323 210 241 22 chr10 41252189 41252476 -99064289 + MLT1E1 LTR MaLR 227 654 0 941 278 71 22 chr10 41252482 41253137 -99063628 + L1MC4a LINE L1 5524 6214 -745 2252 123 0 0 chr10 41253312 41253622 -99063143 + AluSg SINE Alu 1 310 0 252 162 15 73 chr10 41253622 41253690 -99063075 + L1MC4 LINE L1 7475 7538 -504 243 254 30 15 chr10 41253718 41253785 -99062980 - MER5B DNA MER1_type -110 68 1 1690 197 3 7 chr10 41253911 41254210 -99062555 - AluJo SINE Alu -14 298 1 2127 112 0 11 chr10 41254385 41254520 -99062245 + AluSx SINE Alu 1 136 -172 2108 126 3 10 chr10 41254520 41254829 -99061936 + AluSg SINE Alu 1 307 -3 2127 112 0 11 chr10 41254829 41255004 -99061761 + AluSx SINE Alu 136 308 0 1226 299 88 48 chr10 41255029 41255302 -99061463 + L1MC4a LINE L1 6204 6464 -2139 2246 95 9 25 chr10 41255302 41255619 -99061146 + AluSx SINE Alu 1 312 0 1226 299 88 48 chr10 41255619 41256352 -99060413 + L1MC4a LINE L1 6464 7251 -1352 1943 131 0 17 chr10 41256398 41256535 -99060230 + AluSx SINE Alu 1 139 -167 1862 116 0 58 chr10 41256535 41256829 -99059936 + AluSq SINE Alu 23 299 -14 1943 131 0 17 chr10 41256829 41257002 -99059763 + AluSx SINE Alu 139 306 0 2378 78 3 0 chr10 41257002 41257298 -99059467 + AluSp SINE Alu 2 298 -15 253 263 82 82 chr10 41257402 41257533 -99059232 + L1ME LINE L1 5386 5519 -602 2479 79 0 0 chr10 41257533 41257837 -99058928 + AluY SINE Alu 1 304 -7 253 263 82 82 chr10 41257837 41257876 -99058889 + L1ME LINE L1 5518 5556 -565 1717 146 14 22 chr10 41257913 41258188 -99058577 - AluJo SINE Alu -39 273 1 298 268 183 0 chr10 41258220 41258362 -99058403 + L1ME LINE L1 5691 5858 -304 1959 168 124 24 chr10 41258570 41259029 -99057736 + MLT1D LTR MaLR 1 505 0 536 286 78 10 chr10 41259224 41259430 -99057335 + L1MB5 LINE L1 7 226 -6316 1828 166 12 98 chr10 41259436 41259700 -99057065 - MLT1B LTR MaLR 0 390 175 2221 150 132 11 chr10 41259700 41260079 -99056686 + MSTA LTR MaLR 1 425 -3 1828 166 12 98 chr10 41260079 41260241 -99056524 - MLT1B LTR MaLR -215 175 1 767 226 77 39 chr10 41260425 41260659 -99056106 + L1MB5 LINE L1 451 693 -5849 4630 188 50 17 chr10 41260661 41260761 -99056004 + L1MB5 LINE L1 4685 4780 -1892 2371 104 0 0 chr10 41260761 41261070 -99055695 + AluSc SINE Alu 1 309 0 4630 188 50 17 chr10 41261070 41262608 -99054157 + L1MB5 LINE L1 4780 6381 -291 831 153 94 53 chr10 41262613 41262775 -99053990 + AluJo SINE Alu 125 296 -16 1401 181 40 0 chr10 41262775 41263052 -99053713 + L1MB5 LINE L1 6377 6664 -8 2243 102 0 10 chr10 41263478 41263791 -99052974 + AluSg SINE Alu 1 310 0 236 188 0 94 chr10 41263971 41264067 -99052698 + L1MC4 LINE L1 6614 6700 -1342 218 152 0 22 chr10 41264086 41264132 -99052633 + (TA)n Simple_repeat Simple_repeat 1 45 0 290 256 427 0 chr10 41264181 41264298 -99052467 + MER5A DNA MER1_type 23 189 0 266 231 77 22 chr10 41265049 41265140 -99051625 + MIR SINE MIR 25 120 -88 2387 43 43 70 chr10 41265640 41265985 -99050780 - LTR2B LTR ERV1 -154 336 1 694 109 10 0 chr10 41265985 41266079 -99050686 - MSTA LTR MaLR -331 97 3 654 215 96 28 chr10 41266406 41266678 -99050087 - MLT2D LTR ERVL -73 341 1 2440 92 0 3 chr10 41266860 41267166 -99049599 + AluSg SINE Alu 1 305 -5 2324 108 0 0 chr10 41267166 41267463 -99049302 + AluSx SINE Alu 1 297 -15 2127 209 22 15 chr10 41267465 41267502 -99049263 - MSTD-int LTR MaLR -1269 466 431 1588 115 0 41 chr10 41267502 41267745 -99049020 + AluSq SINE Alu 66 298 -15 2127 209 22 15 chr10 41267745 41268166 -99048599 - MSTD-int LTR MaLR -1304 431 5 1623 186 114 17 chr10 41268172 41268219 -99048546 - MSTD LTR MaLR 0 396 355 2348 163 58 15 chr10 41268219 41268629 -99048136 - MSTA LTR MaLR 0 428 1 1623 186 114 17 chr10 41268629 41268942 -99047823 - MSTD LTR MaLR -41 355 1 1313 199 38 76 chr10 41268943 41269090 -99047675 + L1M4 LINE L1 4795 4946 -1200 2341 88 19 0 chr10 41269090 41269397 -99047368 + AluSq SINE Alu 1 313 0 1313 199 38 76 chr10 41269397 41269672 -99047093 + L1M4 LINE L1 4946 5201 -945 1991 134 0 3 chr10 41269680 41269996 -99046769 + AluSq SINE Alu 1 315 0 997 133 0 78 chr10 41269996 41270176 -99046589 + MER4A LTR ERV1 397 562 -102 783 183 86 46 chr10 41270176 41270351 -99046414 - AluSg1 SINE Alu -126 183 2 258 180 40 0 chr10 41270354 41270404 -99046361 + MER4A LTR ERV1 613 664 0 579 197 98 0 chr10 41270408 41270540 -99046225 + L1MC4a LINE L1 7083 7227 -581 374 191 225 0 chr10 41270541 41270630 -99046135 + MLT1F1 LTR MaLR 1 109 -458 836 148 93 38 chr10 41270640 41270689 -99046076 + L1MD3 LINE L1 7401 7446 -549 1069 207 132 88 chr10 41270689 41271075 -99045690 - MER57A LTR ERV1 0 403 1 836 148 93 38 chr10 41271075 41271208 -99045557 + L1MD3 LINE L1 7446 7593 -402 1055 203 37 164 chr10 41271218 41271907 -99044858 - LTR8A LTR ERV1 -13 714 138 438 151 55 14 chr10 41271908 41271981 -99044784 + AluS SINE Alu 2 77 -236 1662 167 60 18 chr10 41271993 41272087 -99044678 + L1MD3 LINE L1 7647 7736 -259 6242 62 33 4 chr10 41272087 41272845 -99043920 + LTR17 LTR ERV1 1 780 0 1662 167 60 18 chr10 41272845 41273085 -99043680 + L1MD3 LINE L1 7736 7995 0 384 259 76 15 chr10 41273621 41273752 -99043013 - MIR SINE MIR -13 249 111 225 286 0 0 chr10 41274397 41274460 -99042305 + MIR SINE MIR 119 181 -81 221 322 58 50 chr10 41274984 41275105 -99041660 - MIR SINE MIR -62 146 25 553 214 53 30 chr10 41276633 41276764 -99040001 + MER94 DNA DNA 1 134 0 257 259 25 12 chr10 41276948 41277029 -99039736 - MER5A DNA MER1_type -80 109 28 1158 283 165 9 chr10 41277034 41277561 -99039204 - L1MC4a LINE L1 -1904 5973 5365 279 276 68 45 chr10 41277592 41277856 -99038909 - L1MC4a LINE L1 -905 5310 5041 638 266 119 40 chr10 41277869 41278259 -99038506 - L1MC4a LINE L1 -4417 1979 1621 2140 103 0 7 chr10 41278259 41278560 -99038205 + AluSx SINE Alu 1 299 -13 638 266 119 40 chr10 41278560 41278794 -99037971 - L1MC4a LINE L1 -4775 1621 1292 1995 84 62 7 chr10 41278794 41279068 -99037697 + AluSc SINE Alu 1 289 -20 638 266 119 40 chr10 41279068 41279141 -99037624 - L1MC4a LINE L1 -5104 1292 1226 359 149 37 0 chr10 41279194 41279301 -99037464 + (TA)n Simple_repeat Simple_repeat 2 112 0 298 146 0 0 chr10 41279307 41279348 -99037417 - Alu SINE Alu -22 280 240 1585 170 91 87 chr10 41279352 41279678 -99037087 - L1MD2 LINE L1 -253 6106 5783 2392 85 3 0 chr10 41279678 41279973 -99036792 - AluSp SINE Alu -17 296 1 1585 170 91 87 chr10 41279973 41280285 -99036480 - L1MD2 LINE L1 -576 5783 5330 3215 129 42 2 chr10 41280322 41280830 -99035935 - MER34B LTR ERV1 -55 510 1 2296 229 41 34 chr10 41280836 41281544 -99035221 - L1MD2 LINE L1 -844 5302 4590 2120 127 0 7 chr10 41281857 41282149 -99034616 - AluSg SINE Alu -20 290 1 2080 91 7 20 chr10 41282243 41282540 -99034225 - AluY SINE Alu -18 293 1 857 214 22 56 chr10 41282609 41282787 -99033978 - FRAM SINE Alu -4 172 1 285 318 75 16 chr10 41282788 41283043 -99033722 - HAL1 LINE L1 -1427 1080 811 2111 113 3 13 chr10 41283336 41283637 -99033128 - AluSx SINE Alu -14 298 1 1938 128 7 26 chr10 41283645 41283950 -99032815 - AluSx SINE Alu -13 299 1 516 224 128 32 chr10 41284035 41284254 -99032511 - L1MC5 LINE L1 -30 7931 7692 783 235 47 13 chr10 41284288 41284522 -99032243 - L1MC4 LINE L1 -59 7983 7742 517 136 12 0 chr10 41284650 41284731 -99032034 + AluS SINE Alu 223 304 -6 910 166 57 0 chr10 41284731 41284888 -99031877 + AluSg/x SINE Alu 118 283 -27 561 198 246 73 chr10 41284912 41285272 -99031493 - L1MC5 LINE L1 -274 7687 7228 1546 181 9 48 chr10 41285272 41285587 -99031178 - AluJo SINE Alu -9 303 1 561 198 246 73 chr10 41285587 41285690 -99031075 - L1MC5 LINE L1 -733 7228 7144 1263 225 8 16 chr10 41285692 41285950 -99030815 - LTR39 LTR ERV1 0 783 528 325 222 74 22 chr10 41285956 41286091 -99030674 - L1ME LINE L1 -591 5571 5430 370 303 130 30 chr10 41286202 41286433 -99030332 - L1MEc LINE L1 -4602 1794 1541 341 152 0 15 chr10 41286553 41286619 -99030146 - L1M4c LINE L1 -3940 2706 2642 1653 179 13 22 chr10 41286621 41286934 -99029831 + AluJb SINE Alu 1 310 -2 546 206 29 6 chr10 41286939 41287109 -99029656 + GA-rich Low_complexity Low_complexity 5 178 0 1779 226 193 26 chr10 41287134 41287858 -99028907 - L1M4c LINE L1 -3999 2647 1803 2206 254 90 46 chr10 41287867 41288562 -99028203 - L1M4c LINE L1 -4926 1720 1058 2070 92 75 20 chr10 41288562 41288855 -99027910 - AluSc SINE Alu 0 309 1 2206 254 90 46 chr10 41288855 41289763 -99027002 - L1M4c LINE L1 -5588 1058 3 3950 141 108 9 chr10 41289809 41290566 -99026199 - L1MC3 LINE L1 -9 8012 7181 794 178 89 23 chr10 41290995 41291209 -99025556 - L1MC3 LINE L1 -802 7219 6992 1180 131 17 0 chr10 41291209 41291385 -99025380 - AluSg/x SINE Alu -3 309 131 1472 208 57 6 chr10 41291389 41291845 -99024920 - L1MC3 LINE L1 -743 5639 5356 1424 233 54 32 chr10 41291818 41292406 -99024359 - L1MC3 LINE L1 -3128 3254 2654 * 275 259 0 0 chr10 41292384 41292465 -99024300 - L1MC3 LINE L1 -5258 1126 1046 * 324 70 0 0 chr10 41292472 41292515 -99024250 + (TG)n Simple_repeat Simple_repeat 2 44 0 302 275 0 0 chr10 41292584 41292664 -99024101 - L1MC3 LINE L1 -1037 6748 6669 1606 255 46 5 chr10 41292667 41293108 -99023657 - MER68 LTR ERV1 -73 532 1 225 293 0 14 chr10 41293126 41293273 -99023492 - L1MC3 LINE L1 -5247 1125 981 309 348 9 17 chr10 41293636 41293751 -99023014 + L2 LINE L2 3136 3249 -23 2111 110 0 4 chr10 41294603 41294915 -99021850 + AluSc SINE Alu 1 311 0 300 158 0 0 chr10 41295207 41295264 -99021501 + (TG)n Simple_repeat Simple_repeat 2 58 0 1520 296 89 30 chr10 41295308 41296218 -99020547 - L2 LINE L2 -163 3150 2176 443 268 0 0 chr10 41296218 41296330 -99020435 - MER58C DNA MER1_type 0 215 104 223 271 7 21 chr10 41296332 41296417 -99020348 + CT-rich Low_complexity Low_complexity 2 138 0 181 292 69 0 chr10 41296556 41296628 -99020137 - L2 LINE L2 -1230 2084 2008 180 111 0 0 chr10 41296956 41296983 -99019782 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 197 65 32 0 chr10 41297830 41297861 -99018904 + (TTA)n Simple_repeat Simple_repeat 1 32 0 280 273 0 0 chr10 41300941 41301008 -99015757 + (TA)n Simple_repeat Simple_repeat 2 71 -7 1789 160 117 10 chr10 41301008 41301401 -99015364 - MER63B DNA MER1_type -1 435 1 280 273 0 0 chr10 41301401 41301410 -99015355 + (TA)n Simple_repeat Simple_repeat 70 78 0 435 270 135 30 chr10 41302594 41302794 -99013971 - LTR33 LTR ERVL 0 521 301 286 221 221 45 chr10 41303646 41303800 -99012965 - L2 LINE L2 -169 3144 2964 226 300 73 0 chr10 41303846 41303956 -99012809 + MER112 DNA MER1_type 98 215 -45 236 250 46 40 chr10 41305921 41306073 -99010692 - L1ME LINE L1 -298 5823 5671 1850 179 0 7 chr10 41306273 41306574 -99010191 + AluJb SINE Alu 1 299 -13 2357 78 0 23 chr10 41307026 41307335 -99009430 + AluY SINE Alu 1 302 -9 1264 225 130 30 chr10 41307564 41308026 -99008739 + MLT2B2 LTR ERVL 1 508 -7 2176 136 0 0 chr10 41308137 41308446 -99008319 + AluSx SINE Alu 3 311 -1 2503 81 0 0 chr10 41308646 41308954 -99007811 - AluSc SINE Alu -1 308 1 1441 137 13 0 chr10 41309129 41309356 -99007409 - MER30 DNA MER1_type 0 230 1 28 29 0 0 chr10 41309413 41309448 -99007317 + AT_rich Low_complexity Low_complexity 1 35 0 596 297 43 5 chr10 41310557 41310742 -99006023 + MIR SINE MIR 1 192 -70 234 226 65 16 chr10 41310821 41310883 -99005882 - L2 LINE L2 -82 3231 3167 401 230 0 0 chr10 41310892 41310966 -99005799 + L1M4b LINE L1 11 84 -6775 2386 82 0 19 chr10 41313791 41314108 -99002657 + AluY SINE Alu 1 311 0 2912 249 48 19 chr10 41314652 41315524 -99001241 + L1M4b LINE L1 90 986 -5873 * 7210 171 107 80 chr10 41315514 41316643 -99000122 + L1M4c LINE L1 157 1255 -5127 2172 113 10 16 chr10 41316643 41316953 -98999812 + AluSx SINE Alu 1 308 -4 7210 171 107 80 chr10 41316953 41318177 -98998588 + L1M4c LINE L1 1255 2445 -3937 14590 143 39 30 chr10 41318177 41319750 -98997015 - Tigger2 DNA MER2_type 0 2718 1161 2092 134 0 3 chr10 41319750 41320048 -98996717 - AluJb SINE Alu -10 302 6 14590 143 39 30 chr10 41320048 41320134 -98996631 - Tigger2 DNA MER2_type -1557 1161 1077 1748 169 6 44 chr10 41320134 41320454 -98996311 - AluJb SINE Alu -4 308 1 14590 143 39 30 chr10 41320454 41320542 -98996223 - Tigger2 DNA MER2_type -1641 1077 991 196 51 26 26 chr10 41320542 41320581 -98996184 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 14590 143 39 30 chr10 41320581 41321524 -98995241 - Tigger2 DNA MER2_type -1727 991 1 7210 171 107 80 chr10 41321524 41321833 -98994932 + L1M4c LINE L1 2445 2887 -3495 231 226 43 0 chr10 41422058 41422112 -98894653 - MER5A DNA MER1_type -82 106 41 2102 129 0 0 chr10 41422262 41422556 -98894209 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 41422556 41422580 -98894185 + AT_rich Low_complexity Low_complexity 1 24 0 979 143 0 0 chr10 41424626 41424773 -98891992 - L1PA16 LINE L1 -9 6157 6011 2073 146 10 0 chr10 41425662 41425970 -98890795 - AluSx SINE Alu -1 311 1 1743 125 91 8 chr10 41426071 41426355 -98890410 + AluSg1 SINE Alu 1 309 0 1912 112 72 0 chr10 41426631 41426909 -98889856 + AluSq SINE Alu 1 298 -15 1938 118 7 4 chr10 41427253 41427525 -98889240 + AluSx SINE Alu 1 273 -39 186 43 0 0 chr10 41427533 41427556 -98889209 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2607 71 0 0 chr10 41429590 41429901 -98886864 - AluY SINE Alu 0 311 1 787 103 0 28 chr10 41429901 41430008 -98886757 - FRAM SINE Alu -19 157 54 907 197 11 115 chr10 41430268 41430641 -98886124 - MLT1A1 LTR MaLR 0 396 39 1777 117 24 0 chr10 41430649 41430918 -98885847 - AluSx SINE Alu 0 301 27 240 128 106 21 chr10 41430922 41430969 -98885796 - AluSx SINE Alu -251 51 1 * 256 111 0 44 chr10 41430969 41431010 -98885755 - MLT1A1 LTR MaLR -386 42 4 1801 262 39 0 chr10 41431940 41432429 -98884336 - LTR53 LTR ERVL -1 518 11 2389 173 69 32 chr10 41432591 41433095 -98883670 - L1MC2 LINE L1 -11 6333 5811 * 3509 230 111 34 chr10 41433080 41433846 -98882919 - L1M4 LINE L1 -1819 4327 3435 2002 127 0 20 chr10 41433846 41434138 -98882627 - AluSg SINE Alu -24 286 1 3509 230 111 34 chr10 41434138 41434566 -98882199 - L1M4 LINE L1 -2711 3435 3041 365 262 57 8 chr10 41434969 41435091 -98881674 + Zaphod DNA AcHobo 3904 4031 0 243 88 0 0 chr10 41435476 41435510 -98881255 + (CA)n Simple_repeat Simple_repeat 1 34 0 337 253 98 41 chr10 41435510 41435688 -98881077 + L1MD3 LINE L1 6153 7796 -12 191 35 0 35 chr10 41438416 41438445 -98878320 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1045 229 102 23 chr10 41439042 41439466 -98877299 + MLT1B LTR MaLR 1 390 0 31 26 0 0 chr10 41439616 41439654 -98877111 + AT_rich Low_complexity Low_complexity 1 38 0 1767 250 67 59 chr10 41439895 41440763 -98876002 - L1M4 LINE L1 -1404 4742 3868 4153 181 73 33 chr10 41440783 41441813 -98874952 - MER45R DNA AcHobo 0 1581 511 1941 128 3 17 chr10 41542178 41542314 -98774451 + AluSx SINE Alu 1 137 -175 1941 114 8 0 chr10 41542314 41542576 -98774189 + AluSq SINE Alu 39 302 -11 1941 128 3 17 chr10 41542576 41542728 -98774037 + AluSx SINE Alu 137 285 -27 348 24 0 0 chr10 41542746 41542757 -98774008 + (TG)n Simple_repeat Simple_repeat 1 52 0 348 24 0 0 chr10 41542757 41542798 -98773967 + (TG)n Simple_repeat Simple_repeat 2 42 0 461 230 133 12 chr10 41543019 41543184 -98773581 - MLT1C LTR MaLR 0 467 283 3146 112 27 33 chr10 41544424 41544631 -98772134 + MER49 LTR ERV1 1 208 -715 2434 78 3 0 chr10 41544631 41544927 -98771838 + AluY SINE Alu 1 297 -14 3146 112 27 33 chr10 41544927 41545230 -98771535 + MER49 LTR ERV1 208 508 -415 683 218 83 10 chr10 41545500 41545693 -98771072 + L1MC2 LINE L1 6138 6344 0 337 332 80 36 chr10 41546339 41546589 -98770176 + MIR SINE MIR 1 261 -1 250 318 9 36 chr10 41546784 41546894 -98769871 - MIR SINE MIR -61 147 41 2593 162 31 0 chr10 41547168 41547582 -98769183 - MSTA LTR MaLR -1 427 1 9505 165 31 28 chr10 41547582 41548819 -98767946 - MSTA-int LTR MaLR 0 1651 406 1454 192 91 0 chr10 41548819 41549105 -98767660 - AluJb SINE Alu 0 312 1 9505 165 31 28 chr10 41549105 41549513 -98767252 - MSTA-int LTR MaLR -1245 406 1 266 128 0 0 chr10 41549513 41549552 -98767213 - MSTA LTR MaLR 0 428 390 2305 97 0 0 chr10 41549552 41549840 -98766925 + AluSg SINE Alu 1 288 -22 2069 153 114 0 chr10 41549885 41550245 -98766520 - MSTA LTR MaLR -27 401 1 412 138 0 53 chr10 41550504 41550598 -98766167 - LTR49-int LTR ERV1 -2782 3816 3728 613 51 39 13 chr10 41550667 41550745 -98766020 - MADE1 DNA Mariner 0 80 1 502 233 61 28 chr10 41550756 41550936 -98765829 - LTR49-int LTR ERV1 -2868 3730 3545 326 173 12 37 chr10 41551018 41551099 -98765666 - LTR49-int LTR ERV1 -4274 2484 2406 213 39 0 0 chr10 41551130 41551156 -98765609 + (T)n Simple_repeat Simple_repeat 1 26 0 614 166 40 108 chr10 41552152 41552375 -98764390 - LTR49-int LTR ERV1 -2486 3845 3638 299 331 17 6 chr10 41552429 41552604 -98764161 - L1M4 LINE L1 -2396 3750 3574 495 287 96 56 chr10 41552614 41553115 -98763650 - HSATI Satellite Satellite -13 564 44 32 26 0 0 chr10 41553333 41553372 -98763393 + AT_rich Low_complexity Low_complexity 1 39 0 373 141 113 0 chr10 41553600 41553671 -98763094 + MSTD LTR MaLR 316 394 -2 3827 45 5 1 chr10 41553678 41554191 -98762574 + L1PA4 LINE L1 5608 6128 -27 207 0 0 0 chr10 41554626 41554649 -98762116 + (TG)n Simple_repeat Simple_repeat 2 24 0 185 278 42 0 chr10 41554929 41555001 -98761764 + MIR SINE MIR 178 252 -10 600 290 67 9 chr10 41555186 41555689 -98761076 - MLT1G LTR MaLR -29 561 1 1030 145 38 0 chr10 41555725 41555884 -98760881 - L1PA12 LINE L1 -5468 2113 1949 1680 107 25 0 chr10 41555884 41556127 -98760638 + L1PA13 LINE L1 5915 6163 0 5948 117 34 28 chr10 41556385 41556407 -98760358 - MER49 LTR ERV1 -4 919 899 2403 96 0 0 chr10 41556407 41556710 -98760055 + AluSq SINE Alu 1 303 -10 5948 117 34 28 chr10 41556710 41557601 -98759164 - MER49 LTR ERV1 -24 899 1 2429 195 60 39 chr10 41557928 41558573 -98758192 - HERVL68 LTR ERVL -1785 1252 594 293 291 0 58 chr10 41558723 41558809 -98757956 - HERVL68 LTR ERVL -2611 426 346 1584 155 7 69 chr10 41558845 41559136 -98757629 + AluJo SINE Alu 1 273 -39 2044 217 100 14 chr10 41559150 41559674 -98757091 - MER68 LTR ERV1 0 562 11 2050 128 3 13 chr10 41559686 41559990 -98756775 - AluSc SINE Alu -8 301 1 2065 125 7 10 chr10 41560390 41560694 -98756071 + AluSx SINE Alu 1 303 -9 1500 154 135 0 chr10 41562005 41562271 -98754494 + AluSx SINE Alu 1 302 -10 1993 145 0 3 chr10 41563501 41563804 -98752961 + AluSx SINE Alu 1 302 -10 2412 89 0 0 chr10 41563856 41564160 -98752605 + AluSg SINE Alu 1 304 -6 24 0 0 0 chr10 41564379 41564403 -98752362 + AT_rich Low_complexity Low_complexity 1 24 0 1676 127 14 40 chr10 41564410 41564526 -98752239 - L1PB3 LINE L1 -9 6145 6028 2117 124 10 0 chr10 41564526 41564825 -98751940 - AluSq SINE Alu -11 302 1 1676 127 14 40 chr10 41564825 41564983 -98751782 - L1PB3 LINE L1 -126 6028 5878 1852 108 87 17 chr10 41567159 41567447 -98749318 + AluSg SINE Alu 1 308 -2 1343 221 111 3 chr10 41567995 41568302 -98748463 + MER58B DNA MER1_type 2 341 0 2427 82 0 19 chr10 41568552 41568868 -98747897 + AluSg SINE Alu 1 310 0 3070 164 26 56 chr10 41569035 41569657 -98747108 - L1MB5 LINE L1 -6 6168 5566 728 202 85 48 chr10 41569659 41569931 -98746834 - L1MB5 LINE L1 -1475 4671 4390 835 194 31 6 chr10 41569931 41570091 -98746674 + MER58B DNA MER1_type 139 302 -39 928 224 122 11 chr10 41570101 41570387 -98746378 - L1MB5 LINE L1 -1752 4394 4077 4423 189 36 25 chr10 41570397 41571188 -98745577 - L1MB2 LINE L1 -36 6633 5675 8594 75 11 5 chr10 41571188 41572252 -98744513 - MER11C LTR ERVK 0 1071 1 4423 189 36 25 chr10 41572252 41572816 -98743949 - L1MB2 LINE L1 -994 5675 5119 3698 239 60 50 chr10 41572815 41573067 -98743698 - L1MB2 LINE L1 -3706 2938 2690 * 2189 109 0 43 chr10 41573067 41573389 -98743376 - AluSg SINE Alu -2 308 1 3698 239 60 50 chr10 41573389 41575596 -98741169 - L1MB2 LINE L1 -3954 2690 330 1594 200 66 132 chr10 41575717 41576232 -98740533 - L1MC4 LINE L1 -881 6927 6447 2403 99 3 0 chr10 41576255 41576559 -98740206 - AluSp SINE Alu -8 305 1 653 174 65 14 chr10 41576848 41576986 -98739779 - MLT1A1 LTR MaLR -220 145 1 1356 235 60 22 chr10 41576986 41577403 -98739362 - L1M4 LINE L1 -1729 4915 4483 * 30632 94 12 10 chr10 41577397 41582749 -98734016 + L1PA7 LINE L1 795 6154 0 439 143 52 0 chr10 41582750 41582827 -98733938 - L1MA3 LINE L1 -193 6112 6032 1007 207 64 0 chr10 41582961 41583164 -98733601 - L1M4 LINE L1 -4631 2015 1800 794 64 0 0 chr10 41583169 41583263 -98733502 - AluY SINE Alu -16 295 202 619 214 35 151 chr10 41583268 41583627 -98733138 - L1M4 LINE L1 -5621 936 644 899 68 83 30 chr10 41583627 41583759 -98733006 - MER85 DNA T2_type 0 139 1 619 214 35 151 chr10 41583759 41583790 -98732975 - L1M4 LINE L1 -5913 644 611 710 31 21 0 chr10 41583985 41584081 -98732684 + (TTTTC)n Simple_repeat Simple_repeat 3 100 0 2102 108 7 0 chr10 41584082 41584360 -98732405 - AluSq SINE Alu -33 280 1 1646 147 0 0 chr10 41584460 41584705 -98732060 - AluSx SINE Alu -5 307 63 438 174 35 0 chr10 41585187 41585273 -98731492 + Charlie7 DNA MER1_type 51 139 -2473 28 29 0 0 chr10 41585285 41585320 -98731445 + AT_rich Low_complexity Low_complexity 1 35 0 450 0 0 0 chr10 41586321 41586371 -98730394 + (TG)n Simple_repeat Simple_repeat 2 51 0 346 246 25 68 chr10 41586752 41586919 -98729846 - L1ME3 LINE L1 0 6164 5990 1427 178 13 80 chr10 41587023 41587337 -98729428 + AluJb SINE Alu 3 295 -17 1933 174 0 0 chr10 41588081 41588368 -98728397 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr10 41588368 41588388 -98728377 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2042 144 20 0 chr10 41591401 41591700 -98725065 + AluSx SINE Alu 1 305 -7 725 240 65 26 chr10 41592282 41592580 -98724185 + L1 LINE L1 3483 3794 -2352 986 239 217 3 chr10 41592836 41593209 -98723556 + L1MC4 LINE L1 6461 6913 -1129 1833 175 7 7 chr10 41593210 41593513 -98723252 + AluJb SINE Alu 1 303 -9 282 145 65 16 chr10 41593513 41593575 -98723190 + L1MC/D LINE L1 5744 5808 -525 * 3168 175 36 2 chr10 41593563 41594176 -98722589 + L1 LINE L1 4610 5243 -903 1440 163 55 4 chr10 41594176 41594433 -98722332 - MSTA LTR MaLR 0 428 159 855 83 16 0 chr10 41594447 41594568 -98722197 + L1MA3 LINE L1 6183 6305 0 605 225 31 8 chr10 41594716 41594845 -98721920 - MSTA LTR MaLR -294 132 1 6410 95 65 7 chr10 41594860 41595854 -98720911 + L1MA3 LINE L1 5254 6305 0 229 250 240 0 chr10 41596023 41596123 -98720642 + L1M4 LINE L1 4542 4665 -1481 593 204 36 149 chr10 41596251 41596559 -98720206 + L1M4 LINE L1 4965 5237 -909 1432 142 118 146 chr10 41596930 41597004 -98719761 + LOR1a LTR ERV1 1 76 -421 1847 143 156 45 chr10 41597004 41597383 -98719382 - MSTA LTR MaLR -4 424 4 1432 142 118 146 chr10 41597383 41597800 -98718965 + LOR1a LTR ERV1 76 478 -19 2318 90 0 0 chr10 41600017 41600306 -98716459 - AluSg SINE Alu -21 289 1 375 110 8 11 chr10 41600506 41600577 -98716188 + Alu SINE Alu 248 299 -3 579 108 11 0 chr10 41600583 41600676 -98716089 - L1PA15 LINE L1 -1 6164 6071 894 97 8 0 chr10 41600678 41600802 -98715963 - L1PA15 LINE L1 -159 6006 5882 485 46 31 0 chr10 41600816 41600881 -98715884 + MER41A LTR ERV1 400 466 -88 5254 237 54 16 chr10 41601123 41601710 -98715055 - L1MB4 LINE L1 -3 6413 5850 2017 143 0 29 chr10 41601710 41602024 -98714741 - AluSx SINE Alu -7 305 1 5254 237 54 16 chr10 41602024 41603800 -98712965 - L1MB4 LINE L1 -566 5850 3946 1264 171 46 0 chr10 41603800 41604040 -98712725 + Tigger5 DNA MER2_type 2073 2323 0 1234 257 39 25 chr10 41604040 41604557 -98712208 - L1MB4 LINE L1 -3512 2870 2347 5127 58 2 3 chr10 41604569 41605170 -98711595 - L1PA5 LINE L1 -1 6153 5554 6611 112 0 11 chr10 41605170 41606123 -98710642 - L1P LINE L1 -4627 1519 578 4919 233 109 31 chr10 41606118 41606359 -98710406 - L1MB4 LINE L1 -4029 2355 2134 * 2305 104 0 3 chr10 41606359 41606656 -98710109 + AluSc SINE Alu 1 296 -13 4919 233 109 31 chr10 41606656 41606842 -98709923 - L1MB4 LINE L1 -4250 2134 1964 2130 123 70 25 chr10 41606842 41607201 -98709564 - THE1C LTR MaLR 0 375 1 4919 233 109 31 chr10 41607201 41607401 -98709364 - L1MB4 LINE L1 -4420 1964 1781 1894 137 0 36 chr10 41607401 41607708 -98709057 - AluSq SINE Alu -17 296 1 4919 233 109 31 chr10 41607708 41609162 -98707603 - L1MB4 LINE L1 -4603 1781 16 197 308 135 0 chr10 41610071 41610175 -98706590 + MIR3 SINE MIR 63 180 -28 2253 113 0 0 chr10 41610627 41610920 -98705845 - AluSc SINE Alu -16 293 1 2081 234 122 144 chr10 41611482 41612397 -98704368 + L1MC4a LINE L1 6272 7265 -543 596 236 0 0 chr10 41612397 41612520 -98704245 + MLT1F1 LTR MaLR 3 125 -442 2081 234 122 144 chr10 41612520 41613053 -98703712 + L1MC4a LINE L1 7265 7808 0 1812 150 0 0 chr10 41613082 41613349 -98703416 + AluSx SINE Alu 1 267 -45 1290 231 117 2 chr10 41613912 41614324 -98702441 - L1MDa LINE L1 -4112 2428 1970 2100 134 0 10 chr10 41617069 41617376 -98699389 + AluSx SINE Alu 1 304 -8 591 140 32 0 chr10 41617528 41617621 -98699144 - AluSp/q SINE Alu -10 303 208 263 128 26 0 chr10 41617621 41617660 -98699105 - Alu SINE Alu -262 40 1 200 329 63 0 chr10 41617701 41617780 -98698985 - MIR3 SINE MIR -25 183 100 288 267 13 0 chr10 41617805 41617880 -98698885 + Tigger2 DNA MER2_type 3 78 -2640 * 635 268 18 59 chr10 41617868 41618029 -98698736 - MER8 DNA MER2_type -28 211 60 2305 172 64 40 chr10 41618029 41618528 -98698237 - MER9 LTR ERVK 0 511 1 635 268 18 59 chr10 41618528 41618586 -98698179 - MER8 DNA MER2_type -179 60 1 247 263 88 25 chr10 41619439 41619519 -98697246 - MIR3 SINE MIR -46 162 78 2056 154 0 0 chr10 41620094 41620392 -98696373 - AluSx SINE Alu -14 298 1 386 333 42 48 chr10 41620621 41620826 -98695939 + L2 LINE L2 2946 3150 -163 2295 88 0 16 chr10 41620826 41621131 -98695634 - AluY SINE Alu -9 302 3 386 333 42 48 chr10 41621131 41621255 -98695510 + L2 LINE L2 3150 3273 -40 1115 177 60 41 chr10 41621807 41622073 -98694692 - MER92B LTR ERV1 -365 271 1 2150 118 0 3 chr10 41622484 41622827 -98693938 - AluSq SINE Alu 0 313 1 1689 200 7 0 chr10 41622941 41623251 -98693514 - AluSx SINE Alu 0 312 1 1378 97 0 78 chr10 41623399 41623605 -98693160 - AluSp SINE Alu -123 190 1 23 0 0 0 chr10 41623786 41623809 -98692956 + AT_rich Low_complexity Low_complexity 1 23 0 898 206 0 0 chr10 41624115 41624290 -98692475 + AluJb SINE Alu 137 311 -1 195 286 0 0 chr10 41625671 41625776 -98690989 + (TG)n Simple_repeat Simple_repeat 2 106 0 2373 89 0 6 chr10 41626466 41626780 -98689985 - AluSq SINE Alu 0 313 2 379 267 90 71 chr10 41626788 41627476 -98689289 + L1M4 LINE L1 3064 3764 -2382 478 286 32 7 chr10 41629169 41629323 -98687442 + MER58B DNA MER1_type 177 334 -7 2171 221 100 77 chr10 41630008 41630895 -98685870 - L1MC4a LINE L1 -1 7807 6900 1945 75 12 181 chr10 41630901 41631315 -98685450 - LTR14A LTR ERVK 0 344 1 2239 211 49 81 chr10 41631318 41631815 -98684950 - L1MC4a LINE L1 -909 6899 6428 216 0 0 0 chr10 41631815 41631839 -98684926 + (TG)n Simple_repeat Simple_repeat 2 25 0 2239 211 49 81 chr10 41631839 41632017 -98684748 - L1MC4a LINE L1 -1380 6428 6246 397 188 11 125 chr10 41632040 41632216 -98684549 - L1MC4a LINE L1 -1794 6014 5859 2297 116 0 3 chr10 41632376 41632687 -98684078 - AluSx SINE Alu -2 310 1 1584 143 4 15 chr10 41633050 41633309 -98683456 - AluSx SINE Alu -11 301 46 28 86 0 0 chr10 41633754 41633824 -98682941 + AT_rich Low_complexity Low_complexity 1 70 0 1244 251 88 47 chr10 41634248 41634805 -98681960 + L1MC5 LINE L1 6636 7215 -746 2950 128 40 5 chr10 41634807 41635253 -98681512 + MER4C LTR ERV1 1 462 -3 541 227 9 0 chr10 41635259 41635369 -98681396 + MSTD LTR MaLR 1 111 -285 225 133 83 67 chr10 41635371 41635431 -98681334 + L1MC5 LINE L1 7009 7069 -892 746 237 36 8 chr10 41635552 41635742 -98681023 + MSTD LTR MaLR 216 382 -14 341 69 0 17 chr10 41636163 41636221 -98680544 + (TG)n Simple_repeat Simple_repeat 2 58 0 2276 121 0 0 chr10 41636649 41636962 -98679803 - AluSq SINE Alu 0 313 1 306 0 0 0 chr10 41637160 41637194 -98679571 + (TG)n Simple_repeat Simple_repeat 2 35 0 2713 208 61 41 chr10 41638173 41638910 -98677855 - L1MC1 LINE L1 0 6333 5582 699 196 0 38 chr10 41638964 41639097 -98677668 - AluJb SINE Alu -164 148 21 540 235 76 34 chr10 41642042 41642228 -98674537 + MLT1J LTR MaLR 60 300 -211 347 265 14 82 chr10 41642258 41642405 -98674360 + L2 LINE L2 3136 3272 0 2367 97 0 0 chr10 41642678 41642977 -98673788 + AluSg SINE Alu 1 299 -11 290 291 81 0 chr10 41644310 41644396 -98672369 - L2 LINE L2 -24 3289 3197 2108 119 33 81 chr10 41645540 41645934 -98670831 + THE1C LTR MaLR 1 375 0 396 283 194 16 chr10 41645965 41646156 -98670609 + MIR SINE MIR 35 259 -3 1517 127 0 0 chr10 41648051 41648280 -98668485 + L1PA8 LINE L1 5937 6165 -7 707 173 0 58 chr10 41648871 41649010 -98667755 - FLAM_A SINE Alu -2 131 1 1928 186 70 15 chr10 41649978 41650375 -98666390 - MSTB LTR MaLR -7 419 1 310 194 56 0 chr10 41651626 41651698 -98665067 - HAL1 LINE L1 -335 2172 2097 435 348 26 49 chr10 41651975 41652242 -98664523 - HAL1 LINE L1 -548 1959 1699 648 272 181 53 chr10 41652288 41652762 -98664003 - HAL1 LINE L1 -904 1603 1069 328 209 164 18 chr10 41652766 41652876 -98663889 - HAL1 LINE L1 -1542 965 840 281 333 0 10 chr10 41652995 41653097 -98663668 - HAL1 LINE L1 -1832 675 575 1164 176 5 32 chr10 41653816 41654032 -98662733 + AluJo SINE Alu 87 296 -16 5343 155 34 9 chr10 41654155 41655805 -98660960 - L1PB1 LINE L1 -2 6149 4452 3092 204 1 8 chr10 41655798 41656504 -98660261 + L1PB1 LINE L1 3761 4461 -1685 * 26915 114 17 18 chr10 41658777 41664243 -98652522 + L1PA8 LINE L1 717 6168 -4 2147 125 3 0 chr10 41664249 41664567 -98652198 + AluSq SINE Alu 1 319 0 255 31 0 0 chr10 41664743 41664775 -98651990 + (CAA)n Simple_repeat Simple_repeat 1 32 0 582 251 39 45 chr10 41665299 41665478 -98651287 + MER5B DNA MER1_type 1 178 0 314 194 83 111 chr10 41665503 41665647 -98651118 + MIR3 SINE MIR 68 207 -1 22 0 0 0 chr10 41666046 41666068 -98650697 + AT_rich Low_complexity Low_complexity 1 22 0 1915 162 0 3 chr10 41666247 41666544 -98650221 + AluSx SINE Alu 1 296 -16 582 274 26 0 chr10 41667169 41667322 -98649443 - MER20 DNA MER1_type -3 216 60 1230 208 201 10 chr10 41667338 41667926 -98648839 - Charlie1 DNA MER1_type -181 2580 1881 1203 192 103 33 chr10 41667994 41668265 -98648500 - AluSq SINE Alu -23 290 1 1893 106 83 0 chr10 41668817 41669103 -98647662 - AluSq SINE Alu 0 308 1 2399 91 0 0 chr10 41669133 41669440 -98647325 - AluY SINE Alu 0 311 5 2303 106 0 7 chr10 41669767 41670070 -98646695 + AluSq SINE Alu 3 303 -10 285 291 35 0 chr10 41670120 41670206 -98646559 - MER3 DNA MER1_type -109 100 12 * 305 177 177 15 chr10 41670174 41670304 -98646461 + Charlie2 DNA MER1_type 2384 2534 -328 195 280 140 26 chr10 41671544 41671737 -98645028 - L2 LINE L2 -907 2407 2193 546 232 0 9 chr10 41671757 41671869 -98644896 + FLAM_A SINE Alu 1 111 -31 2181 91 0 0 chr10 41671869 41672191 -98644574 - AluY SINE Alu 0 327 6 1230 206 91 18 chr10 41672228 41672504 -98644261 + AluJo SINE Alu 1 296 -16 713 303 121 33 chr10 41672670 41673319 -98643446 - L2 LINE L2 -5 3308 2593 243 61 0 0 chr10 41674123 41674156 -98642609 + (T)n Simple_repeat Simple_repeat 1 33 0 9309 179 43 6 chr10 41674209 41676010 -98640755 + L1PB2 LINE L1 17 1884 -5681 2106 161 2 19 chr10 41676005 41676427 -98640338 + L1PB2 LINE L1 6018 6432 -1133 * 723 171 14 43 chr10 41676430 41676570 -98640195 + AluJ SINE Alu 1 136 -176 1305 211 37 6 chr10 41676571 41676921 -98639844 + L1PB2 LINE L1 6421 6781 -784 883 234 0 0 chr10 41676922 41677076 -98639689 + AluJ SINE Alu 133 286 -26 5127 117 34 25 chr10 41677078 41677667 -98639098 + L1MA3 LINE L1 5354 5957 -348 2246 112 0 0 chr10 41677667 41677972 -98638793 - AluSg SINE Alu -5 305 1 5127 117 34 25 chr10 41677972 41678318 -98638447 + L1MA3 LINE L1 5957 6298 -7 1911 159 80 1 chr10 41679026 41679525 -98637240 + L1PB2 LINE L1 6816 7366 -204 216 97 0 0 chr10 41679541 41679572 -98637193 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 177 36 18 chr10 41680154 41680406 -98636359 + AluJb SINE Alu 2 306 0 2014 114 46 0 chr10 41683162 41683443 -98633322 + AluSg1 SINE Alu 1 294 -15 22 0 0 0 chr10 41684486 41684508 -98632257 + AT_rich Low_complexity Low_complexity 1 22 0 809 257 0 0 chr10 41684635 41684806 -98631959 - FAM SINE Alu -14 171 1 802 212 0 7 chr10 41684918 41685069 -98631696 + FAM SINE Alu 16 165 -20 270 85 0 0 chr10 41685781 41685828 -98630937 - AluSx SINE Alu 0 302 256 1144 135 6 6 chr10 41685828 41685998 -98630767 - AluSx SINE Alu -142 170 1 254 261 0 0 chr10 41686476 41686545 -98630220 - MER116 DNA Mariner -5 75 7 2293 111 0 0 chr10 41687192 41687489 -98629276 - AluSg SINE Alu -8 302 6 39740 62 4 1 chr10 41687523 41693655 -98623110 + L1PA5 LINE L1 1 6147 -7 195 280 27 27 chr10 41694693 41694768 -98621997 + MER5A DNA MER1_type 1 75 -114 706 229 109 5 chr10 41694768 41694969 -98621796 + L1MD3 LINE L1 7730 7951 -44 310 311 50 25 chr10 41694978 41695097 -98621668 + MER5A DNA MER1_type 55 176 -13 483 280 60 60 chr10 41695145 41695345 -98621420 - MIR SINE MIR -54 208 9 2325 72 0 31 chr10 41695504 41695825 -98620940 - AluY SINE Alu 0 311 1 192 284 42 74 chr10 41697626 41697721 -98619044 - L2 LINE L2 -81 3191 3100 263 27 0 27 chr10 41698068 41698105 -98618660 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 279 0 0 0 chr10 41698292 41698323 -98618442 + (A)n Simple_repeat Simple_repeat 1 31 0 2204 119 3 0 chr10 41698384 41698687 -98618078 + AluSp SINE Alu 5 308 -5 1270 238 146 23 chr10 41698995 41699524 -98617241 - MER92B LTR ERV1 -10 626 33 487 263 47 32 chr10 41699548 41699738 -98617027 + MER21B LTR ERV1 408 600 -263 567 159 34 0 chr10 41699739 41699866 -98616899 + AluSc SINE Alu 191 320 0 4210 117 55 44 chr10 41699866 41700471 -98616294 - MER4B-int LTR ERV1 -4085 2513 2085 1921 149 7 0 chr10 41700471 41700759 -98616006 - AluSq SINE Alu -19 294 5 4210 117 55 44 chr10 41700759 41701394 -98615371 - MER4B-int LTR ERV1 -4513 2085 1458 2432 106 8 0 chr10 41701422 41701780 -98614985 - L1PB1 LINE L1 -3 6148 5788 3839 114 90 14 chr10 41701780 41702435 -98614330 + MER61-int LTR ERV1 4285 4989 -228 690 260 27 27 chr10 41702794 41703167 -98613598 - L1MEc LINE L1 -2715 3667 3295 2190 142 3 0 chr10 41703190 41703501 -98613264 - AluSx SINE Alu 0 312 1 897 272 33 22 chr10 41703510 41703878 -98612887 - L1MEc LINE L1 -3379 3003 2632 367 281 150 7 chr10 41703885 41704038 -98612727 - L1MEc LINE L1 -5026 1358 1184 856 255 101 34 chr10 41704044 41704459 -98612306 - L1MEc LINE L1 -5273 1290 848 527 95 0 0 chr10 41704459 41704533 -98612232 - FAM SINE Alu -8 177 104 872 283 63 24 chr10 41704587 41705001 -98611764 - L1MEc LINE L1 -5734 829 400 297 318 52 32 chr10 41705011 41705165 -98611600 - L2 LINE L2 -1034 2280 2124 223 326 45 45 chr10 41705585 41705717 -98611048 + MIR SINE MIR 26 157 -105 24 53 0 0 chr10 41705815 41705853 -98610912 + AT_rich Low_complexity Low_complexity 1 38 0 733 172 0 0 chr10 41705964 41706080 -98610685 - FLAM_C SINE Alu -27 116 1 24 67 0 0 chr10 41706741 41706786 -98609979 + AT_rich Low_complexity Low_complexity 1 45 0 262 282 194 8 chr10 41707180 41707428 -98609337 + L1ME4a LINE L1 5765 6058 -63 28 29 0 0 chr10 41707531 41707566 -98609199 + AT_rich Low_complexity Low_complexity 1 35 0 419 196 399 0 chr10 41707727 41707860 -98608905 + MER5A DNA MER1_type 4 189 0 649 291 72 25 chr10 41708086 41708323 -98608442 - MIR SINE MIR 0 262 15 7849 231 49 41 chr10 41708358 41710142 -98606623 + L1MA7 LINE L1 1 1770 -4580 2410 93 0 3 chr10 41710142 41710443 -98606322 + AluSq SINE Alu 1 300 -13 7849 231 49 41 chr10 41710443 41713376 -98603389 + L1MA7 LINE L1 1770 4429 -1921 865 218 75 93 chr10 41713376 41713837 -98602928 - MER66A LTR ERV1 -3 475 97 1347 136 68 19 chr10 41713893 41714203 -98602562 + L1MA7 LINE L1 4426 4750 -1600 448 207 78 0 chr10 41714196 41714312 -98602453 + L1 LINE L1 5223 5347 -799 * 4223 197 48 11 chr10 41714301 41715985 -98600780 + L1MA7 LINE L1 4739 6483 -12 2659 102 6 6 chr10 41716245 41716609 -98600156 - THE1B LTR MaLR 0 364 1 248 304 49 10 chr10 41716644 41716725 -98600040 - L2 LINE L2 -4 3309 3222 2135 120 16 13 chr10 41716725 41717034 -98599731 + AluSp SINE Alu 1 310 -3 248 304 49 10 chr10 41717034 41717054 -98599711 - L2 LINE L2 -91 3222 3204 237 65 0 0 chr10 41717446 41717477 -98599288 + (TG)n Simple_repeat Simple_repeat 2 32 0 1327 167 0 0 chr10 41717624 41717840 -98598925 - MLT1A1 LTR MaLR 0 365 150 952 219 0 0 chr10 41717840 41718009 -98598756 - FAM SINE Alu -13 172 4 2306 125 49 33 chr10 41718030 41718342 -98598423 + MER4B LTR ERV1 115 421 -358 2362 64 0 0 chr10 41718342 41718647 -98598118 - AluY SINE Alu 0 305 1 2306 125 49 33 chr10 41718647 41718823 -98597942 + MER4B LTR ERV1 421 779 0 2719 84 18 11 chr10 41720401 41720781 -98595984 + L1PA11 LINE L1 5792 6174 0 253 326 23 23 chr10 41722062 41722148 -98594617 + MIR SINE MIR 17 102 -160 2455 106 11 0 chr10 41722264 41722613 -98594152 + THE1A LTR MaLR 1 353 -2 2900 164 57 4 chr10 41722964 41723495 -98593270 - MER89 LTR ERV1 0 559 1 433 264 68 36 chr10 41726183 41726433 -98590332 - L1MC4 LINE L1 -1029 7013 6756 209 182 0 0 chr10 41726549 41726582 -98590183 + polypyrimidine Low_complexity Low_complexity 6 38 0 621 314 33 25 chr10 41726604 41726846 -98589919 + MIR SINE MIR 19 262 0 209 32 0 32 chr10 41727515 41727546 -98589219 + (TTCCC)n Simple_repeat Simple_repeat 5 34 0 816 154 19 6 chr10 41727736 41727898 -98588867 - MER89 LTR ERV1 -1 558 395 229 375 39 10 chr10 41728068 41728172 -98588593 + L2 LINE L2 3125 3231 -41 2179 122 0 0 chr10 41729762 41730056 -98586709 - AluSq SINE Alu -19 294 1 211 356 100 28 chr10 41730323 41730503 -98586262 + MIR SINE MIR 27 219 -43 588 284 107 50 chr10 41730921 41731379 -98585386 - L1MC4 LINE L1 -2000 5808 5325 221 325 223 6 chr10 41732030 41732196 -98584569 - MIR SINE MIR -1 261 60 387 210 98 128 chr10 41732204 41732759 -98584006 - MER34C LTR ERV1 -5 537 3 2580 138 34 15 chr10 41733266 41733526 -98583239 + L1MA4 LINE L1 5527 5801 -499 234 0 0 0 chr10 41733526 41733552 -98583213 + (TA)n Simple_repeat Simple_repeat 2 27 0 2580 138 34 15 chr10 41733552 41733756 -98583009 + L1MA4 LINE L1 5801 6000 -300 295 188 2 0 chr10 41733776 41733851 -98582914 + L1MB3 LINE L1 6079 6154 -17 7586 16 0 1 chr10 41734219 41735711 -98581054 - L1HS LINE L1 0 6155 4666 * 9903 24 0 0 chr10 41735709 41736919 -98579846 + L1HS LINE L1 3463 4672 -1474 5793 68 4 0 chr10 41737501 41738240 -98578525 + L1PA7 LINE L1 5402 6143 -11 217 390 48 0 chr10 41738909 41739014 -98577751 + L2 LINE L2 3138 3247 -25 308 345 35 7 chr10 41739186 41739328 -98577437 + MIR3 SINE MIR 60 205 -3 230 346 58 0 chr10 41739462 41739566 -98577199 - L2 LINE L2 0 3272 3163 189 372 47 40 chr10 41740004 41740152 -98576613 + MER5A DNA MER1_type 40 188 -1 398 329 32 0 chr10 41740194 41740349 -98576416 + MIR SINE MIR 54 213 -49 182 263 35 18 chr10 41740355 41740412 -98576353 + MER5B DNA MER1_type 11 68 -110 2129 128 3 6 chr10 41740826 41741139 -98575626 + AluSx SINE Alu 1 312 0 256 272 49 0 chr10 41741550 41741819 -98574946 + (TA)n Simple_repeat Simple_repeat 1 282 0 181 0 33 33 chr10 41741965 41741995 -98574770 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1231 202 89 16 chr10 41742000 41742257 -98574508 - AluJo SINE Alu -33 279 4 1858 168 0 20 chr10 41742768 41742904 -98573861 + AluJb SINE Alu 6 143 -169 2256 104 17 0 chr10 41742904 41743203 -98573562 + AluY SINE Alu 2 305 -6 1858 168 0 20 chr10 41743203 41743364 -98573401 + AluJb SINE Alu 143 297 -15 258 247 81 65 chr10 41743805 41743904 -98572861 - MARNA DNA Mariner -253 333 228 1475 212 48 0 chr10 41743904 41744197 -98572568 + AluJo SINE Alu 1 307 -5 258 247 81 65 chr10 41744197 41744283 -98572482 - MARNA DNA Mariner -358 228 145 578 92 0 0 chr10 41744482 41744558 -98572207 + AluSc SINE Alu 197 272 -37 403 176 10 10 chr10 41744566 41744668 -98572097 + CT-rich Low_complexity Low_complexity 2 103 0 3059 177 21 59 chr10 41744910 41745627 -98571138 - LTR8 LTR ERV1 -1 690 1 425 239 192 0 chr10 41746964 41747094 -98569671 - L2 LINE L2 -1 3271 3117 260 172 0 16 chr10 41747105 41747156 -98569609 + (CATA)n Simple_repeat Simple_repeat 2 53 -11 1615 118 230 28 chr10 41747156 41747512 -98569253 - MSTA LTR MaLR 0 428 1 260 172 0 16 chr10 41747512 41747524 -98569241 + (CATA)n Simple_repeat Simple_repeat 53 64 0 311 316 164 34 chr10 41747528 41747797 -98568968 - L2 LINE L2 -150 3163 2860 2187 169 102 36 chr10 41748144 41748438 -98568327 - LTR49 LTR ERV1 0 595 322 2343 100 7 3 chr10 41748438 41748748 -98568017 + AluSq SINE Alu 1 311 -2 2187 169 102 36 chr10 41748748 41749011 -98567754 - LTR49 LTR ERV1 -273 322 1 798 171 40 29 chr10 41749148 41749323 -98567442 + MER5B DNA MER1_type 2 178 0 1975 169 64 114 chr10 41749919 41750618 -98566147 - MER4A LTR ERV1 0 664 1 720 136 16 16 chr10 41751275 41751400 -98565365 + FLAM_C SINE Alu 11 135 -8 26 62 0 15 chr10 41752645 41752668 -98564097 + AT_rich Low_complexity Low_complexity 1 23 -41 3100 90 26 21 chr10 41752668 41752735 -98564030 + L1PA13 LINE L1 5685 5750 -413 2200 125 0 0 chr10 41752735 41753032 -98563733 + AluSx SINE Alu 1 297 -15 3100 90 26 21 chr10 41753032 41753433 -98563332 + L1PA13 LINE L1 5750 6155 -8 26 62 0 15 chr10 41753433 41753474 -98563291 + AT_rich Low_complexity Low_complexity 23 64 0 789 285 65 8 chr10 41753854 41754100 -98562665 - MIR SINE MIR 0 262 3 528 232 116 0 chr10 41754284 41754396 -98562369 + FLAM_A SINE Alu 4 128 -5 319 258 113 21 chr10 41754552 41754649 -98562116 + L2 LINE L2 3157 3262 -10 361 303 9 0 chr10 41756910 41757019 -98559746 - MIR SINE MIR -1 261 152 360 295 75 62 chr10 41757048 41757275 -98559490 + L1M3c LINE L1 173 402 -5911 2419 210 93 7 chr10 41757688 41758469 -98558296 + L1M3c LINE L1 777 1787 -4516 225 325 100 0 chr10 41758469 41758547 -98558218 - MIR SINE MIR -160 102 17 621 143 9 54 chr10 41758547 41758659 -98558106 + MER5A DNA MER1_type 1 107 -82 646 247 57 71 chr10 41758780 41759116 -98557649 + MER46C DNA MER2_type 6 336 -2 244 296 105 26 chr10 41759128 41759280 -98557485 + MIR3 SINE MIR 21 184 -24 505 81 40 0 chr10 41759382 41759456 -98557309 + MADE1 DNA Mariner 3 79 -1 2164 108 48 0 chr10 41760367 41760662 -98556103 + AluSx SINE Alu 1 309 -3 1138 82 98 27 chr10 41760672 41760696 -98556069 - MER107 DNA MER1_type 0 197 176 234 0 0 0 chr10 41760696 41760722 -98556043 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1138 82 98 27 chr10 41760722 41760881 -98555884 - MER107 DNA MER1_type -21 176 1 24 32 0 0 chr10 41761513 41761544 -98555221 + AT_rich Low_complexity Low_complexity 1 31 0 266 333 194 7 chr10 41761577 41761721 -98555044 - MIR3 SINE MIR -27 181 11 293 301 38 53 chr10 41762436 41762569 -98554196 + MIR SINE MIR 22 152 -110 375 23 0 0 chr10 41762648 41762692 -98554073 + (CAT)n Simple_repeat Simple_repeat 2 45 0 309 26 0 0 chr10 41763223 41763261 -98553504 + (TG)n Simple_repeat Simple_repeat 2 39 0 1948 91 7 18 chr10 41764196 41764471 -98552294 + AluSc SINE Alu 34 305 -4 1713 172 0 7 chr10 41764901 41765191 -98551574 - AluJb SINE Alu -14 298 11 22 0 0 0 chr10 41766405 41766427 -98550338 + AT_rich Low_complexity Low_complexity 1 22 0 258 119 48 0 chr10 41766954 41766996 -98549769 + tRNA-Leu-CTG tRNA tRNA 1 44 -42 872 174 25 156 chr10 41767111 41767294 -98549471 - MER34B LTR ERV1 0 585 438 1730 197 0 7 chr10 41767294 41767584 -98549181 - AluJo SINE Alu -24 288 1 872 174 25 156 chr10 41767584 41767729 -98549036 - MER34B LTR ERV1 -147 438 276 1124 146 10 94 chr10 41767730 41767939 -98548826 - MER7A DNA MER2_type -2692 336 116 2036 126 0 32 chr10 41767939 41768278 -98548487 + AluSq SINE Alu 1 313 0 1124 146 10 94 chr10 41768278 41768366 -98548399 - MER7A DNA MER2_type -2912 116 22 1096 155 55 59 chr10 41768385 41768656 -98548109 - MER34B LTR ERV1 -291 274 5 852 293 67 78 chr10 41769117 41769598 -98547167 + L2 LINE L2 2511 2974 -339 1945 122 0 11 chr10 41769598 41769861 -98546904 - AluSq SINE Alu -53 260 1 852 293 67 78 chr10 41769861 41770114 -98546651 + L2 LINE L2 2974 3228 -85 444 62 0 0 chr10 41770525 41770589 -98546176 + (TG)n Simple_repeat Simple_repeat 2 65 0 21 36 0 0 chr10 41771383 41771411 -98545354 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 41773776 41773804 -98542961 + AT_rich Low_complexity Low_complexity 1 28 0 250 269 43 92 chr10 41773962 41774103 -98542662 + MIR3 SINE MIR 10 143 -65 240 162 0 0 chr10 41774289 41774326 -98542439 + Alu SINE Alu 1 37 -262 256 135 0 0 chr10 41774413 41774450 -98542315 + Alu SINE Alu 1 37 -264 2284 110 0 10 chr10 41774534 41774843 -98541922 + AluSg SINE Alu 1 306 -4 585 193 176 0 chr10 41777806 41777982 -98538783 - MER5C DNA MER1_type 0 324 118 3814 112 20 27 chr10 41777983 41778261 -98538504 + MER51C LTR ERV1 1 280 -360 4613 70 52 5 chr10 41778261 41778891 -98537874 - PABL_A LTR ERV1 0 660 1 3814 112 20 27 chr10 41778891 41779275 -98537490 + MER51C LTR ERV1 280 640 0 289 148 98 0 chr10 41779275 41779336 -98537429 - MER5C DNA MER1_type -204 120 54 2214 102 3 23 chr10 41779610 41779787 -98536978 - AluSx SINE Alu -13 299 129 252 86 0 0 chr10 41779787 41779822 -98536943 + (TA)n Simple_repeat Simple_repeat 2 36 0 2214 102 3 23 chr10 41779822 41779949 -98536816 - AluSx SINE Alu -183 129 1 23 33 0 0 chr10 41780466 41780496 -98536269 + AT_rich Low_complexity Low_complexity 1 30 0 193 182 0 0 chr10 41782213 41782246 -98534519 - L2 LINE L2 -7 3306 3274 180 191 48 0 chr10 41782234 41782276 -98534489 - MER5A DNA MER1_type -21 168 125 * 570 239 75 0 chr10 41782935 41783136 -98533629 + L1MD3 LINE L1 7771 7986 -9 228 67 0 0 chr10 41783531 41783561 -98533204 + (T)n Simple_repeat Simple_repeat 1 30 0 185 222 0 22 chr10 41785299 41785344 -98531421 - L2 LINE L2 -5 3308 3265 750 312 113 60 chr10 41785770 41787184 -98529581 - L2 LINE L2 -580 2734 1246 843 131 15 0 chr10 41787485 41787615 -98529150 + FLAM_C SINE Alu 2 133 0 2165 127 0 0 chr10 41787879 41788171 -98528594 - AluSg SINE Alu -18 292 1 846 183 6 74 chr10 41788172 41788347 -98528418 - FRAM SINE Alu -13 163 1 2509 54 0 3 chr10 41788357 41788654 -98528111 - AluY SINE Alu -15 296 1 367 273 58 8 chr10 41789276 41789397 -98527368 - MIR SINE MIR -12 250 124 2221 102 3 0 chr10 41789417 41789702 -98527063 + AluSq SINE Alu 1 286 -27 225 304 70 43 chr10 41789722 41789837 -98526928 - MIR SINE MIR -138 124 7 880 45 0 0 chr10 41790524 41790635 -98526130 + L1PA5 LINE L1 6040 6150 -4 758 234 73 108 chr10 41791400 41791772 -98524993 + MLT1A1 LTR MaLR 6 364 -1 263 138 21 43 chr10 41791776 41791870 -98524895 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 918 78 37 26 chr10 41791908 41792191 -98524574 + (TCTA)n Simple_repeat Simple_repeat 1 466 0 1048 130 35 25 chr10 41792565 41792765 -98524000 + L1MA8 LINE L1 6060 6261 -30 22 56 0 0 chr10 41792781 41792817 -98523948 + AT_rich Low_complexity Low_complexity 1 36 0 1017 202 204 34 chr10 41793512 41793957 -98522808 + HsTC2a DNA Tc2 8 528 -216 314 368 32 8 chr10 41793963 41794088 -98522677 + L2 LINE L2 3140 3267 -5 859 165 0 82 chr10 41794191 41794361 -98522404 + FRAM SINE Alu 1 156 -20 28 0 0 0 chr10 41794590 41794618 -98522147 + AT_rich Low_complexity Low_complexity 1 28 0 2294 121 0 0 chr10 41795093 41795399 -98521366 + AluSg SINE Alu 1 306 -4 28 29 0 0 chr10 41795660 41795695 -98521070 + AT_rich Low_complexity Low_complexity 1 35 0 377 255 77 21 chr10 41795695 41795930 -98520835 + L1ME3A LINE L1 2738 2985 -3161 2519 279 69 12 chr10 41795950 41797493 -98519272 + L1ME3A LINE L1 4523 6155 -15 22 0 0 0 chr10 41799969 41799991 -98516774 + AT_rich Low_complexity Low_complexity 1 22 0 368 256 92 0 chr10 41800823 41800959 -98515806 + MIR SINE MIR 42 198 -64 1917 157 0 16 chr10 41801123 41801429 -98515336 + AluSx SINE Alu 1 301 -11 1965 143 13 0 chr10 41801847 41802180 -98514585 + AluSx SINE Alu 1 312 0 246 208 0 0 chr10 41802186 41802239 -98514526 + GA-rich Low_complexity Low_complexity 2 54 0 229 256 12 23 chr10 41802617 41802632 -98514133 + GA-rich Low_complexity Low_complexity 4 18 -70 1669 161 21 18 chr10 41802632 41802918 -98513847 + AluJo SINE Alu 15 301 -11 229 256 12 23 chr10 41802918 41802988 -98513777 + GA-rich Low_complexity Low_complexity 18 88 0 2105 122 0 13 chr10 41803852 41804155 -98512610 - AluSx SINE Alu -13 299 1 554 209 174 94 chr10 41804461 41804972 -98511793 - MER34C LTR ERV1 0 585 34 400 306 34 14 chr10 41805331 41805478 -98511287 - MIR3 SINE MIR -15 193 44 348 24 0 0 chr10 41806198 41806239 -98510526 + (CA)n Simple_repeat Simple_repeat 2 42 0 504 195 205 25 chr10 41806897 41807097 -98509668 + MER106A DNA MER1_type 1 236 0 364 318 104 50 chr10 41807132 41807793 -98508972 + L1M4 LINE L1 2332 3028 -3118 3715 58 6 0 chr10 41807922 41808390 -98508375 - L1PA8 LINE L1 -2 6170 5700 1605 233 36 42 chr10 41808590 41809096 -98507669 + MLT1D LTR MaLR 3 505 0 699 197 16 0 chr10 41809273 41809400 -98507365 + FLAM_C SINE Alu 1 129 -4 2428 76 0 0 chr10 41809474 41809778 -98506987 + AluY SINE Alu 1 304 -7 205 109 43 22 chr10 41810355 41810401 -98506364 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 298 355 60 17 chr10 41810794 41811028 -98505737 - L2 LINE L2 -458 2856 2613 1212 212 22 18 chr10 41811064 41811342 -98505423 + AluJo SINE Alu 1 279 -33 318 219 20 0 chr10 41811344 41811490 -98505275 + (TA)n Simple_repeat Simple_repeat 1 149 0 336 244 70 45 chr10 41812464 41812706 -98504059 + L1ME4a LINE L1 5636 5883 -238 2094 134 0 0 chr10 41812724 41813031 -98503734 + AluSx SINE Alu 1 307 0 218 218 18 0 chr10 41813263 41813318 -98503447 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 184 154 0 51 chr10 41813817 41813856 -98502909 + L3b LINE CR1 1196 1232 -351 674 264 17 6 chr10 41814151 41814325 -98502440 - MER5B DNA MER1_type 0 178 3 2056 127 3 3 chr10 41814370 41814678 -98502087 - AluSc SINE Alu 0 309 2 280 250 0 36 chr10 41814908 41814992 -98501773 - MIR SINE MIR -54 208 128 25 51 0 0 chr10 41814992 41815031 -98501734 + AT_rich Low_complexity Low_complexity 1 39 0 772 232 19 58 chr10 41816986 41817220 -98499545 - MIR SINE MIR -1 261 38 319 197 16 0 chr10 41817220 41817281 -98499484 - MIR SINE MIR -131 131 70 23 33 0 0 chr10 41818499 41818529 -98498236 + AT_rich Low_complexity Low_complexity 1 30 0 2126 115 19 19 chr10 41819068 41819380 -98497385 - AluSx SINE Alu 0 312 1 1749 130 16 0 chr10 41820196 41820443 -98496322 + AluSq SINE Alu 40 290 -23 1938 145 0 3 chr10 41820764 41821078 -98495687 + AluSx SINE Alu 1 313 0 866 283 32 78 chr10 41821227 41821765 -98495000 + MER34 LTR ERV1 1 513 -29 321 283 125 0 chr10 41822187 41822307 -98494458 + MLT1G1 LTR MaLR 427 561 -34 259 300 50 0 chr10 41822963 41823043 -98493722 + MER91C DNA MER1_type 22 105 -35 194 300 20 0 chr10 41823888 41823938 -98492827 + L2 LINE L2 3244 3294 -19 2124 96 0 36 chr10 41824295 41824596 -98492169 - AluSg SINE Alu -20 290 1 226 365 40 32 chr10 41825778 41825904 -98490861 + L2 LINE L2 2587 2713 -601 242 320 107 95 chr10 41826067 41826458 -98490307 + L2 LINE L2 2874 3269 -3 2315 84 0 3 chr10 41826520 41826835 -98489930 + AluY SINE Alu 1 314 0 1224 251 106 9 chr10 41827558 41828020 -98488745 + Charlie4a DNA MER1_type 1 507 -1 1412 192 69 3 chr10 41828307 41828625 -98488140 + MER44D DNA MER2_type 1 609 0 371 321 155 0 chr10 41829587 41829755 -98487010 + MIR SINE MIR 55 248 -14 4196 170 9 7 chr10 41830132 41830902 -98485863 - L1PA16 LINE L1 -13 6153 5382 288 256 39 0 chr10 41830979 41831057 -98485708 + MIR SINE MIR 55 135 -127 1019 201 108 0 chr10 41831149 41831427 -98485338 - L1 LINE L1 -743 5403 5096 1414 149 50 71 chr10 41831706 41831987 -98484778 - AluJo SINE Alu -17 295 21 2323 105 0 3 chr10 41832059 41832365 -98484400 + AluSc SINE Alu 1 305 -4 993 163 19 12 chr10 41832397 41832557 -98484208 - FRAM SINE Alu -18 158 1 431 247 101 0 chr10 41832581 41832759 -98484006 - L1MC4 LINE L1 -970 7072 6877 247 327 107 39 chr10 41832980 41833185 -98483580 - MIR SINE MIR -27 235 17 29 0 0 0 chr10 41833764 41833793 -98482972 + AT_rich Low_complexity Low_complexity 1 29 0 1767 74 39 0 chr10 41833793 41834051 -98482714 - L1MA1 LINE L1 0 6302 6035 887 277 28 20 chr10 41834067 41834320 -98482445 - MIR SINE MIR -6 256 2 5810 164 31 28 chr10 41835070 41835663 -98481102 - L1MC3 LINE L1 -27 7758 7169 2382 100 7 0 chr10 41835663 41835973 -98480792 + AluSp SINE Alu 1 312 -1 5810 164 31 28 chr10 41835973 41836617 -98480148 - L1MC3 LINE L1 -616 7169 6516 585 286 91 12 chr10 41837128 41837369 -98479396 - MIR SINE MIR -1 261 2 187 344 16 0 chr10 41837691 41837752 -98479013 - L2 LINE L2 -5 3267 3206 1922 132 19 0 chr10 41837935 41838201 -98478564 - AluSx SINE Alu -19 293 23 719 258 121 5 chr10 41838242 41838432 -98478333 + MIR SINE MIR 17 228 -34 342 358 11 6 chr10 41838439 41838618 -98478147 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 239 57 0 chr10 41839587 41839675 -98477090 + A-rich Low_complexity Low_complexity 2 94 0 204 349 61 0 chr10 41840126 41840192 -98476573 + L2 LINE L2 3197 3266 -47 314 317 0 17 chr10 41841776 41841896 -98474869 - MER117 DNA MER1_type -52 145 28 375 326 190 34 chr10 41842530 41842883 -98473882 + L2 LINE L2 2860 3267 -5 251 182 45 82 chr10 41843402 41843512 -98473253 - MER103 DNA DNA -11 155 50 285 212 0 30 chr10 41843789 41843855 -98472910 + MIR3 SINE MIR 121 184 -24 27617 46 7 0 chr10 41843916 41848315 -98468450 - L1PA5 LINE L1 -8 6146 1720 443 278 66 36 chr10 41848478 41848863 -98467902 - MLT1J LTR MaLR -24 487 50 1844 143 7 11 chr10 41849334 41849621 -98467144 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr10 41849622 41849643 -98467122 + AT_rich Low_complexity Low_complexity 1 21 0 2202 113 0 0 chr10 41849828 41850120 -98466645 + AluSg SINE Alu 1 292 -18 266 311 11 56 chr10 41851141 41851321 -98465444 + MIR SINE MIR 65 236 -26 287 272 98 11 chr10 41851552 41851644 -98465121 + MIR SINE MIR 76 175 -87 271 197 148 0 chr10 41852024 41852085 -98464680 - L2 LINE L2 0 3313 3244 320 252 62 87 chr10 41852086 41852326 -98464439 + L1MEd LINE L1 1076 1353 -4862 809 184 0 0 chr10 41852375 41852500 -98464265 + FLAM_C SINE Alu 3 127 -16 3214 238 52 22 chr10 41852506 41853558 -98463207 - L1M4 LINE L1 -2365 3781 2698 504 275 122 46 chr10 41854005 41854267 -98462498 + L2 LINE L2 3032 3313 0 2851 180 78 3 chr10 41855596 41856164 -98460601 + LTR31 LTR ERV1 1 610 -9 1100 202 165 74 chr10 41856981 41857465 -98459300 + MLT1E2 LTR MaLR 115 626 0 485 250 109 35 chr10 41857687 41857934 -98458831 + L1MC/D LINE L1 5416 5688 -770 998 282 30 15 chr10 41857934 41858267 -98458498 - MER46C DNA MER2_type 0 338 1 485 250 109 35 chr10 41858267 41858296 -98458469 + L1MC/D LINE L1 5688 5713 -745 1019 172 129 168 chr10 41858725 41859082 -98457683 - MSTD LTR MaLR 0 396 56 1631 127 120 8 chr10 41859082 41859341 -98457424 - AluSg1 SINE Alu -21 288 1 1019 172 129 168 chr10 41859341 41859395 -98457370 - MSTD LTR MaLR -340 56 1 1959 155 32 91 chr10 41859500 41859743 -98457022 - LTR56 LTR ERV1 0 445 240 549 115 0 0 chr10 41859743 41859821 -98456944 - L1PA7 LINE L1 0 6154 6077 1959 155 32 91 chr10 41859821 41860041 -98456724 - LTR56 LTR ERV1 -205 240 9 189 0 0 0 chr10 41860372 41860393 -98456372 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2308 91 3 0 chr10 41860804 41861100 -98455665 - AluSp SINE Alu -16 297 1 3143 66 5 13 chr10 41861670 41862058 -98454707 + L1PA6 LINE L1 5754 6140 -14 180 0 0 0 chr10 41862058 41862078 -98454687 + (CTA)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr10 41862191 41862214 -98454551 + (A)n Simple_repeat Simple_repeat 1 23 0 1063 171 47 0 chr10 41865397 41865590 -98451175 + MER3 DNA MER1_type 4 205 -4 834 159 16 0 chr10 41866096 41866222 -98450543 - FRAM SINE Alu -20 156 29 784 258 152 16 chr10 41868925 41869301 -98447464 + L1ME3 LINE L1 5646 6072 -90 1158 197 106 3 chr10 41869808 41870092 -98446673 - MER33 DNA MER1_type 0 324 12 459 190 60 20 chr10 41870128 41870228 -98446537 + MER5A DNA MER1_type 4 107 -82 890 216 79 0 chr10 41870419 41870609 -98446156 + MER3 DNA MER1_type 4 208 -1 595 126 0 0 chr10 41872060 41872147 -98444618 - AluJo/FRAM SINE Alu -16 296 210 1074 139 0 6 chr10 41872147 41872305 -98444460 + AluSc SINE Alu 136 292 -17 1255 153 70 121 chr10 41872345 41872659 -98444106 + AluJb SINE Alu 2 299 -3 277 231 148 74 chr10 41872743 41872851 -98443914 + AluJb SINE Alu 110 225 -77 1183 124 5 62 chr10 41872856 41873065 -98443700 - AluJb SINE Alu -114 198 2 565 239 0 0 chr10 41873125 41873234 -98443531 - AluSg/x SINE Alu -23 287 179 2068 82 14 20 chr10 41873286 41873578 -98443187 - AluSg SINE Alu -20 290 1 495 186 356 21 chr10 41874646 41874834 -98441931 + AluJo SINE Alu 45 295 -17 943 101 22 29 chr10 41874894 41875033 -98441732 + AluJo SINE Alu 23 160 -152 595 188 7 83 chr10 41875040 41875184 -98441581 - FLAM_C SINE Alu 0 133 1 1971 114 11 0 chr10 41875220 41875493 -98441272 + AluSx SINE Alu 2 277 -35 1014 227 15 0 chr10 41875495 41875698 -98441067 + AluJo SINE Alu 76 281 -31 180 0 0 0 chr10 41875698 41875718 -98441047 + (CTAG)n Simple_repeat Simple_repeat 1 20 0 2057 115 0 33 chr10 41876441 41876769 -98439996 - AluSq SINE Alu 0 313 1 2254 102 10 0 chr10 41876791 41877086 -98439679 + AluSp SINE Alu 1 298 -15 2205 113 6 3 chr10 41877223 41877534 -98439231 - AluSx SINE Alu 0 312 1 2128 139 0 13 chr10 41877748 41877927 -98438838 - AluSx SINE Alu 0 312 137 2252 119 3 0 chr10 41877927 41878230 -98438535 - AluSp SINE Alu -9 304 1 2128 139 0 13 chr10 41878230 41878366 -98438399 - AluSx SINE Alu -175 137 1 244 266 16 0 chr10 41879849 41879913 -98436852 + MIR SINE MIR 21 85 -177 189 239 30 15 chr10 41880262 41880329 -98436436 + MIR SINE MIR 85 152 -56 304 98 0 0 chr10 41880599 41880650 -98436115 + AluSp/q SINE Alu 251 301 -2 1990 110 14 3 chr10 41881507 41881809 -98434956 + AluSq SINE Alu 1 305 0 1721 171 14 0 chr10 41882598 41882890 -98433875 + AluSx SINE Alu 2 297 -15 2137 131 0 3 chr10 41883067 41883373 -98433392 - AluSx SINE Alu -7 305 1 1475 224 175 2 chr10 41883404 41883833 -98432932 - MLT1D LTR MaLR -2 503 1 1294 156 40 46 chr10 41883961 41884263 -98432502 - AluY SINE Alu -11 300 1 2190 112 0 0 chr10 41884957 41885252 -98431513 - AluSg1 SINE Alu -14 295 1 2211 107 10 0 chr10 41885313 41885612 -98431153 + AluSp SINE Alu 3 304 -9 2089 114 4 0 chr10 41886409 41886690 -98430075 - AluSg SINE Alu -28 282 1 1726 162 10 7 chr10 41887431 41887721 -98429044 - AluSx SINE Alu -19 293 3 1768 124 0 12 chr10 41888032 41888289 -98428476 - AluSq SINE Alu -14 299 46 444 192 27 0 chr10 41888289 41888362 -98428403 - AluS SINE Alu -237 76 2 180 0 0 0 chr10 41888567 41888587 -98428178 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1771 155 11 4 chr10 41888588 41888866 -98427899 - AluSq SINE Alu -33 280 1 1680 173 88 16 chr10 41889987 41890305 -98426460 + MSTD LTR MaLR 1 341 -55 678 163 17 22 chr10 41890340 41890518 -98426247 + CT-rich Low_complexity Low_complexity 4 180 0 367 182 0 0 chr10 41890518 41890584 -98426181 + MSTD LTR MaLR 330 395 -1 867 205 42 121 chr10 41891067 41891399 -98425366 - L1MC4 LINE L1 -938 7069 6718 1800 98 0 0 chr10 41893115 41893339 -98423426 - AluSq SINE Alu -87 226 3 369 0 0 0 chr10 41893658 41893699 -98423066 + (TG)n Simple_repeat Simple_repeat 2 42 0 1576 208 0 0 chr10 41893700 41893984 -98422781 - AluJb SINE Alu -28 284 1 1053 138 0 0 chr10 41894396 41894541 -98422224 - AluJb SINE Alu -38 274 130 541 176 9 65 chr10 41894552 41894660 -98422105 - MER8 DNA MER2_type -134 105 4 633 175 29 0 chr10 41894880 41894983 -98421782 + U6 snRNA snRNA 2 107 0 312 254 4 33 chr10 41895025 41895143 -98421622 - L1MC4 LINE L1 -469 5652 5577 516 111 12 25 chr10 41895148 41895229 -98421536 + AluJ/FLAM SINE Alu 4 83 -229 2149 116 7 0 chr10 41895424 41895718 -98421047 - AluSg SINE Alu -14 296 1 1481 191 30 30 chr10 41895779 41896082 -98420683 - AluJo SINE Alu -7 305 3 32 26 0 0 chr10 41896152 41896191 -98420574 + AT_rich Low_complexity Low_complexity 1 39 0 363 266 18 18 chr10 41896344 41896453 -98420312 - L1MC4a LINE L1 -1977 5831 5723 1370 223 7 23 chr10 41896491 41896792 -98419973 + AluJo SINE Alu 1 296 -16 638 235 0 0 chr10 41896794 41896909 -98419856 + AluJb SINE Alu 185 299 -13 207 203 47 31 chr10 41897287 41897351 -98419414 + (GGGTG)n Simple_repeat Simple_repeat 1 65 0 245 239 110 55 chr10 41897581 41897690 -98419075 - MIR SINE MIR -75 187 73 7423 111 23 16 chr10 41897805 41898869 -98417896 - MER11C LTR ERVK 0 1071 1 2708 232 80 40 chr10 41898889 41899170 -98417595 - MER21B LTR ERV1 -61 802 534 1815 161 0 16 chr10 41899170 41899475 -98417290 - AluJo SINE Alu -12 300 1 2708 232 80 40 chr10 41899475 41899784 -98416981 - MER21B LTR ERV1 -329 534 173 2052 143 0 3 chr10 41899784 41900078 -98416687 + AluSq SINE Alu 1 293 -20 2708 232 80 40 chr10 41900078 41900240 -98416525 - MER21B LTR ERV1 -690 173 19 346 291 0 0 chr10 41900262 41900341 -98416424 - MER21B LTR ERV1 -773 90 12 1507 206 0 7 chr10 41900347 41900619 -98416146 - AluJo SINE Alu -38 274 5 1499 194 14 57 chr10 41900622 41900973 -98415792 + MLT1D LTR MaLR 162 497 -8 1568 199 10 14 chr10 41901000 41901127 -98415638 + AluJb SINE Alu 10 136 -176 2106 102 35 0 chr10 41901127 41901411 -98415354 + AluSg1 SINE Alu 1 294 -15 1568 199 10 14 chr10 41901411 41901574 -98415191 + AluJb SINE Alu 136 299 -13 1216 271 80 32 chr10 41901574 41902185 -98414580 - L2 LINE L2 -216 3097 2456 749 196 0 0 chr10 41902282 41902415 -98414350 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr10 41902415 41902438 -98414327 + AT_rich Low_complexity Low_complexity 1 23 0 1303 240 10 7 chr10 41902438 41902734 -98414031 + AluJo SINE Alu 2 298 -4 342 245 11 11 chr10 41902879 41902973 -98413792 + LTR37A LTR ERV1 240 333 -93 2062 147 0 3 chr10 41903184 41903490 -98413275 - AluSq SINE Alu -8 305 1 1621 185 20 20 chr10 41903792 41904094 -98412671 - AluJo SINE Alu -10 302 1 2776 196 39 34 chr10 41904115 41904734 -98412031 - L1MB8 LINE L1 -5 6173 5552 671 189 0 0 chr10 41904734 41904845 -98411920 + FLAM_A SINE Alu 4 114 -19 481 173 8 102 chr10 41904879 41904967 -98411798 - L1ME LINE L1 -577 5589 5505 1694 181 10 7 chr10 41904967 41905260 -98411505 - AluJb SINE Alu -18 294 1 481 173 8 102 chr10 41905260 41905291 -98411474 - L1ME LINE L1 -661 5505 5473 597 201 0 122 chr10 41905349 41905409 -98411356 + AluJo SINE Alu 24 90 -222 312 83 0 0 chr10 41905409 41905457 -98411308 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1802 153 22 4 chr10 41905457 41905731 -98411034 - AluSx SINE Alu -33 279 1 597 201 0 122 chr10 41905731 41905833 -98410932 + AluJo SINE Alu 88 167 -145 1396 166 126 15 chr10 41905847 41906118 -98410647 - AluJo SINE Alu -1 301 1 1373 238 0 14 chr10 41906371 41906665 -98410100 - AluJo SINE Alu -18 294 5 344 201 25 132 chr10 41906666 41906825 -98409940 - MLT1D LTR MaLR -292 213 72 189 261 72 14 chr10 41906894 41906963 -98409802 - L2 LINE L2 -32 3281 3209 1726 179 0 13 chr10 41907596 41907903 -98408862 - AluJb SINE Alu -9 303 1 2310 98 3 0 chr10 41907989 41908284 -98408481 - AluSp SINE Alu -17 296 1 24 53 0 0 chr10 41908284 41908322 -98408443 + AT_rich Low_complexity Low_complexity 1 38 0 1853 165 0 3 chr10 41908324 41908615 -98408150 - AluJb SINE Alu -18 294 5 2982 127 9 2 chr10 41908975 41909407 -98407358 + MER1A DNA MER1_type 56 490 -39 704 197 0 0 chr10 41909420 41909537 -98407228 - FLAM_C SINE Alu -18 125 9 569 126 53 0 chr10 41909578 41909856 -98406909 + AluJb SINE Alu 194 476 0 1154 0 16 55 chr10 41909674 41909950 -98406815 + (TAAAA)n Simple_repeat Simple_repeat 3 271 0 191 281 21 31 chr10 41910252 41910348 -98406417 - L2 LINE L2 -211 3061 2967 244 360 36 0 chr10 41910631 41910742 -98406023 - MIR SINE MIR -75 187 73 2595 235 51 43 chr10 41910905 41911150 -98405615 - MER21B LTR ERV1 -112 751 510 1604 208 13 0 chr10 41911150 41911448 -98405317 - AluJo SINE Alu -10 302 1 2595 235 51 43 chr10 41911448 41911518 -98405247 - MER21B LTR ERV1 -353 510 442 1589 186 3 46 chr10 41911518 41911824 -98404941 + AluJb SINE Alu 2 294 -18 2595 235 51 43 chr10 41911824 41912234 -98404531 - MER21B LTR ERV1 -421 442 19 306 286 0 0 chr10 41912260 41912330 -98404435 - MER21B LTR ERV1 -777 86 17 1119 177 3 118 chr10 41912331 41912619 -98404146 - AluJb SINE Alu -13 299 45 686 225 0 0 chr10 41912619 41912739 -98404026 - FLAM_A SINE Alu -13 120 1 648 235 0 7 chr10 41912744 41912880 -98403885 - FLAM_C SINE Alu -7 136 2 1502 175 25 76 chr10 41912880 41913234 -98403531 + MLT1D LTR MaLR 162 497 -8 1719 178 23 13 chr10 41913243 41913377 -98403388 + AluJo SINE Alu 1 132 -180 2152 116 0 10 chr10 41913377 41913689 -98403076 + AluSq SINE Alu 1 313 0 1719 178 23 13 chr10 41913689 41913863 -98402902 + AluJo SINE Alu 132 312 0 1060 228 92 73 chr10 41913864 41914502 -98402263 - L2 LINE L2 -213 3100 2458 539 241 0 0 chr10 41914608 41914724 -98402041 + FLAM_C SINE Alu 9 124 -19 1300 234 14 3 chr10 41914748 41915043 -98401722 + AluJo SINE Alu 1 298 -14 2141 115 3 7 chr10 41915201 41915496 -98401269 + AluSq SINE Alu 5 298 -15 243 211 228 22 chr10 41915539 41915719 -98401046 + Charlie1 DNA MER1_type 2539 2755 -6 1360 205 8 4 chr10 41915773 41916041 -98400724 - AluJo SINE Alu -4 308 40 1060 189 0 5 chr10 41916641 41916831 -98399934 - AluJb SINE Alu -7 305 117 390 226 39 49 chr10 41916831 41916933 -98399832 - MER8 DNA MER2_type -136 103 3 1582 187 0 13 chr10 41917041 41917341 -98399424 + AluJo SINE Alu 1 296 -16 489 206 14 78 chr10 41917579 41917720 -98399045 + AluJo SINE Alu 11 142 -170 304 232 12 24 chr10 41917720 41917802 -98398963 - L1ME LINE L1 -558 5563 5483 1549 179 42 14 chr10 41917933 41918218 -98398547 - AluJo SINE Alu -19 293 1 272 231 33 44 chr10 41918283 41918374 -98398391 + LTR33A LTR ERVL 432 521 -2 2590 131 64 19 chr10 41918638 41919058 -98397707 + MER1A DNA MER1_type 1 439 -90 2218 108 0 0 chr10 41923806 41924103 -98392662 + AluSg SINE Alu 1 297 -13 442 158 0 0 chr10 41927175 41927257 -98389508 - AluSq SINE Alu -2 311 230 877 152 21 7 chr10 41927259 41927404 -98389361 - AluSq SINE Alu -162 151 5 927 234 43 18 chr10 41927411 41927857 -98388908 - L1M2 LINE L1 -4226 2623 2069 2241 103 3 22 chr10 41927857 41928168 -98388597 - AluSg SINE Alu -5 305 1 927 234 43 18 chr10 41928168 41928274 -98388491 - L1M2 LINE L1 -4780 2069 1967 682 158 0 0 chr10 41928275 41928376 -98388389 - FLAM_C SINE Alu -40 103 3 719 119 0 28 chr10 41928378 41928487 -98388278 + AluJo/FLAM SINE Alu 27 132 -180 1872 107 3 66 chr10 41928489 41928778 -98387987 + AluSx SINE Alu 37 307 -5 221 291 30 70 chr10 41929172 41929264 -98387501 + L2 LINE L2 3118 3212 -101 2230 120 0 0 chr10 41929264 41929564 -98387201 + AluSq SINE Alu 1 300 -13 221 291 30 70 chr10 41929564 41929670 -98387095 + L2 LINE L2 3212 3308 -5 2022 126 0 0 chr10 41930110 41930380 -98386385 + AluSx SINE Alu 1 270 -42 321 246 109 36 chr10 41930504 41930614 -98386151 + L2 LINE L2 3195 3312 -1 22 35 0 0 chr10 41931001 41931030 -98385735 + AT_rich Low_complexity Low_complexity 1 29 0 1556 208 39 33 chr10 41931157 41931923 -98384842 - L1M4c LINE L1 -4071 2313 1451 907 137 41 25 chr10 41931924 41932121 -98384644 - L1MA5 LINE L1 0 6300 6101 1886 175 13 0 chr10 41933283 41933586 -98383179 - AluJb SINE Alu -5 307 1 348 387 45 28 chr10 41933749 41934300 -98382465 - L2 LINE L2 -2 3270 2710 482 257 0 9 chr10 41934311 41934424 -98382341 - L2 LINE L2 -5 3308 3197 191 146 24 0 chr10 41934704 41934745 -98382020 + (TA)n Simple_repeat Simple_repeat 1 42 0 573 125 0 0 chr10 41934891 41934987 -98381778 - L1MA5 LINE L1 -5 6295 6200 212 182 0 18 chr10 41935026 41935081 -98381684 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 45 62 0 0 chr10 41936444 41936524 -98380241 + AT_rich Low_complexity Low_complexity 1 80 0 2545 60 0 0 chr10 41936596 41936894 -98379871 + AluY SINE Alu 1 298 -13 508 39 110 0 chr10 41937029 41937183 -98379582 + (TA)n Simple_repeat Simple_repeat 1 171 0 1932 116 86 50 chr10 41938207 41938569 -98378196 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 41938655 41938698 -98378067 + AT_rich Low_complexity Low_complexity 1 43 0 1057 278 118 26 chr10 41938998 41940041 -98376724 - L1ME3A LINE L1 -94 6010 4906 1841 220 41 31 chr10 41940041 41940531 -98376234 - MLT1D LTR MaLR -10 495 1 290 286 116 15 chr10 41940728 41940927 -98375838 - L1ME3A LINE L1 -1430 4699 4481 * 582 218 16 31 chr10 41940917 41941110 -98375655 - L1ME3A LINE L1 -2163 3966 3777 1056 281 71 14 chr10 41941110 41941769 -98374996 - L2 LINE L2 -4 3309 2616 283 325 8 0 chr10 41941933 41942050 -98374715 + L1M4 LINE L1 3524 3641 -2505 369 288 109 51 chr10 41942056 41942539 -98374226 - MER65A LTR ERV1 0 445 2 224 250 183 0 chr10 41942670 41942774 -98373991 + L2 LINE L2 2321 2443 -871 673 302 92 47 chr10 41943448 41943915 -98372850 - L1ME3A LINE L1 -5285 834 347 843 316 52 52 chr10 41943995 41944419 -98372346 - MLT1E LTR MaLR -148 445 22 393 338 72 47 chr10 41945538 41946042 -98370723 - L2 LINE L2 0 3272 2762 2215 116 0 3 chr10 41946742 41947045 -98369720 - AluSq SINE Alu -11 302 1 6050 98 27 0 chr10 41947181 41948045 -98368720 - L1PA14 LINE L1 0 6161 5275 870 218 0 29 chr10 41948116 41948290 -98368475 + FAM SINE Alu 4 172 -3 206 128 26 0 chr10 41948312 41948351 -98368414 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 390 42 0 0 chr10 41948511 41948559 -98368206 + (CA)n Simple_repeat Simple_repeat 1 48 0 707 188 115 19 chr10 41949559 41949793 -98366972 - AluJo SINE Alu -12 300 1 292 328 168 13 chr10 41949802 41950040 -98366725 - L2 LINE L2 -112 3201 2927 246 326 22 0 chr10 41950252 41950344 -98366421 + MIR SINE MIR 82 175 -87 1125 223 127 13 chr10 41950348 41950648 -98366117 - MLT1C LTR MaLR 0 467 134 283 348 54 0 chr10 41951591 41951703 -98365062 + MER5B DNA MER1_type 1 118 -60 340 277 128 21 chr10 41952381 41952496 -98364269 - L1ME4a LINE L1 -4 6117 6016 210 37 0 0 chr10 41952496 41952523 -98364242 + (TA)n Simple_repeat Simple_repeat 1 27 0 340 277 128 21 chr10 41952523 41952595 -98364170 - L1ME4a LINE L1 -105 6016 5910 307 333 159 43 chr10 41953055 41953614 -98363151 - L3 LINE CR1 -10 1567 944 401 290 47 24 chr10 41953625 41953794 -98362971 + LTR33 LTR ERVL 1 173 -348 2121 152 57 31 chr10 41953916 41953936 -98362829 - MSTB1 LTR MaLR 0 432 414 240 35 0 0 chr10 41953936 41953965 -98362800 + (TG)n Simple_repeat Simple_repeat 2 30 0 2121 152 57 31 chr10 41953965 41954215 -98362550 - MSTB1 LTR MaLR -18 414 145 2322 85 0 3 chr10 41954215 41954509 -98362256 + AluSq SINE Alu 5 297 -16 2121 152 57 31 chr10 41954509 41954658 -98362107 - MSTB1 LTR MaLR -287 145 1 273 118 0 0 chr10 41954667 41954718 -98362047 + (GAATG)n Satellite Satellite 4 54 0 639 178 0 0 chr10 41954750 41954924 -98361841 + (GAATG)n Satellite Satellite 2 175 0 876 133 0 0 chr10 41954950 41955130 -98361635 + (GAATG)n Satellite Satellite 1 180 0 786 149 3 18 chr10 41955144 41955478 -98361287 + (GAATG)n Satellite Satellite 1 329 0 918 151 0 0 chr10 41955492 41956032 -98360733 + (GAATG)n Satellite Satellite 1 540 0 827 169 0 14 chr10 41956061 41956424 -98360341 + (GAATG)n Satellite Satellite 1 357 0 931 103 7 18 chr10 41956440 41956805 -98359960 + (GAATG)n Satellite Satellite 1 540 0 270 125 0 0 chr10 41956816 41956864 -98359901 + (GAATG)n Satellite Satellite 2 49 0 865 151 8 13 chr10 41956880 41957284 -98359481 + (GAATG)n Satellite Satellite 1 402 0 747 140 0 0 chr10 41957335 41957492 -98359273 + (GAATG)n Satellite Satellite 1 157 0 1002 133 0 2 chr10 41957547 41957901 -98358864 + (GAATG)n Satellite Satellite 1 533 0 972 143 0 0 chr10 41957912 41958200 -98358565 + (GAATG)n Satellite Satellite 1 288 0 927 162 6 0 chr10 41958227 41958577 -98358188 + (GAATG)n Satellite Satellite 1 352 0 1092 117 0 6 chr10 41958595 41958954 -98357811 + (GAATG)n Satellite Satellite 2 534 0 948 150 0 0 chr10 41958976 41959307 -98357458 + (GAATG)n Satellite Satellite 1 331 0 925 135 9 3 chr10 41959331 41959685 -98357080 + (GAATG)n Satellite Satellite 1 356 0 966 138 0 2 chr10 41959738 41960071 -98356694 + (GAATG)n Satellite Satellite 1 511 0 1122 139 2 0 chr10 41960098 41960725 -98356040 + (GAATG)n Satellite Satellite 1 628 0 966 146 2 4 chr10 41960742 41961763 -98355002 + (GAATG)n Satellite Satellite 1 1197 0 877 117 6 6 chr10 41961763 41961942 -98354823 + (GAATG)n Satellite Satellite 2 180 0 966 122 0 0 chr10 41962222 41962402 -98354363 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 1011 125 0 2 chr10 41962648 41963096 -98353669 + (GAATG)n Satellite Satellite 1 626 0 680 168 4 0 chr10 41963113 41963390 -98353375 + (GAATG)n Satellite Satellite 1 278 0 846 160 2 10 chr10 41963432 41964028 -98352737 + (GAATG)n Satellite Satellite 1 590 0 972 139 0 0 chr10 41964055 41964465 -98352300 + (GAATG)n Satellite Satellite 1 410 0 1065 143 0 0 chr10 41964477 41965019 -98351746 + (GAATG)n Satellite Satellite 1 542 0 273 89 0 0 chr10 41965030 41965075 -98351690 + (GAATG)n Satellite Satellite 1 45 0 939 125 0 0 chr10 41965099 41965267 -98351498 + (GAATG)n Satellite Satellite 4 171 0 714 167 0 0 chr10 41965295 41965475 -98351290 + (GAATG)n Satellite Satellite 1 180 0 815 141 0 6 chr10 41965496 41965673 -98351092 + (GAATG)n Satellite Satellite 4 179 0 1050 149 0 4 chr10 41965691 41966347 -98350418 + (GAATG)n Satellite Satellite 1 831 0 754 118 0 54 chr10 41966361 41966547 -98350218 + (GAATG)n Satellite Satellite 4 179 0 598 183 6 6 chr10 41966560 41966740 -98350025 + (GAATG)n Satellite Satellite 1 180 0 774 140 3 10 chr10 41966769 41967175 -98349590 + (GAATG)n Satellite Satellite 1 402 0 1032 142 0 0 chr10 41967187 41967476 -98349289 + (GAATG)n Satellite Satellite 1 289 0 1006 132 3 5 chr10 41967493 41967934 -98348831 + (GAATG)n Satellite Satellite 1 619 0 1070 116 4 3 chr10 41967951 41968481 -98348284 + (GAATG)n Satellite Satellite 1 710 0 771 156 0 0 chr10 41968521 41968700 -98348065 + (GAATG)n Satellite Satellite 1 179 0 984 126 0 21 chr10 41968711 41969138 -98347627 + (GAATG)n Satellite Satellite 1 591 0 396 228 0 0 chr10 41969150 41969321 -98347444 + (GAATG)n Satellite Satellite 4 174 0 743 158 3 0 chr10 41969354 41969650 -98347115 + (GAATG)n Satellite Satellite 1 297 0 746 166 2 14 chr10 41969668 41970110 -98346655 + (GAATG)n Satellite Satellite 1 436 0 975 144 1 5 chr10 41970129 41971181 -98345584 + (GAATG)n Satellite Satellite 1 1227 0 700 157 3 3 chr10 41971242 41971549 -98345216 + (GAATG)n Satellite Satellite 1 307 0 969 135 0 0 chr10 41971562 41971904 -98344861 + (GAATG)n Satellite Satellite 1 342 0 1011 144 0 9 chr10 41971961 41972939 -98343826 + (GAATG)n Satellite Satellite 1 1147 0 770 141 0 27 chr10 41972976 41973161 -98343604 + (GAATG)n Satellite Satellite 1 180 0 732 160 0 0 chr10 41973182 41973589 -98343176 + (GAATG)n Satellite Satellite 1 407 0 978 117 0 0 chr10 41973602 41973781 -98342984 + (GAATG)n Satellite Satellite 1 179 0 642 174 0 0 chr10 41973801 41973973 -98342792 + (GAATG)n Satellite Satellite 4 175 0 924 133 0 0 chr10 41974026 41974206 -98342559 + (GAATG)n Satellite Satellite 1 180 0 703 146 6 6 chr10 41974231 41974409 -98342356 + (GAATG)n Satellite Satellite 3 180 0 255 79 0 0 chr10 41974450 41974488 -98342277 + (GAATG)n Satellite Satellite 4 41 0 858 167 2 11 chr10 41974505 41975057 -98341708 + (GAATG)n Satellite Satellite 1 546 0 483 177 0 0 chr10 41975069 41975199 -98341566 + (GAATG)n Satellite Satellite 2 131 0 799 141 6 6 chr10 41975219 41975396 -98341369 + (GAATG)n Satellite Satellite 4 180 0 237 98 0 0 chr10 41975406 41975447 -98341318 + (GACTG)n Simple_repeat Simple_repeat 2 42 0 989 108 6 0 chr10 41975482 41975658 -98341107 + (GAATG)n Satellite Satellite 4 180 0 894 150 0 6 chr10 41975703 41976038 -98340727 + (GAATG)n Satellite Satellite 3 509 0 970 126 4 14 chr10 41976050 41976415 -98340350 + (GAATG)n Satellite Satellite 1 540 0 294 87 0 0 chr10 41976438 41976484 -98340281 + (GAATG)n Satellite Satellite 2 47 0 903 146 4 4 chr10 41976506 41977984 -98338781 + (GAATG)n Satellite Satellite 1 1658 0 978 133 0 0 chr10 41978029 41978474 -98338291 + (GAATG)n Satellite Satellite 1 445 0 198 91 0 0 chr10 41978510 41978543 -98338222 + (GAATG)n Satellite Satellite 2 34 0 629 171 6 0 chr10 41978585 41978760 -98338005 + (GAATG)n Satellite Satellite 4 179 0 858 147 0 0 chr10 41978793 41979154 -98337611 + (GAATG)n Satellite Satellite 1 361 0 766 162 6 3 chr10 41979180 41979508 -98337257 + (GAATG)n Satellite Satellite 1 329 0 966 122 0 0 chr10 41979546 41979726 -98337039 + (GAATG)n Satellite Satellite 1 180 0 762 157 6 11 chr10 41979739 41980468 -98336297 + (GAATG)n Satellite Satellite 1 725 0 905 123 6 0 chr10 41980514 41980693 -98336072 + (GAATG)n Satellite Satellite 1 180 0 804 155 0 9 chr10 41980729 41981291 -98335474 + (GAATG)n Satellite Satellite 1 556 0 684 164 0 0 chr10 41981302 41981479 -98335286 + (GAATG)n Satellite Satellite 4 180 0 872 166 0 10 chr10 41981517 41982022 -98334743 + (GAATG)n Satellite Satellite 1 499 0 888 148 0 12 chr10 41982033 41982449 -98334316 + (GAATG)n Satellite Satellite 1 588 0 840 146 0 0 chr10 41982478 41982656 -98334109 + (GAATG)n Satellite Satellite 2 179 0 847 160 1 12 chr10 41982685 41983628 -98333137 + (GAATG)n Satellite Satellite 1 932 0 858 157 0 0 chr10 41983641 41984179 -98332586 + (GAATG)n Satellite Satellite 1 538 0 795 157 0 0 chr10 41984216 41984738 -98332027 + (GAATG)n Satellite Satellite 1 522 0 756 156 0 0 chr10 41984754 41984934 -98331831 + (GAATG)n Satellite Satellite 1 180 0 183 42 0 0 chr10 41984947 41984971 -98331794 + (GAATG)n Satellite Satellite 4 27 0 816 163 2 0 chr10 41984984 41985550 -98331215 + (GAATG)n Satellite Satellite 1 567 0 893 152 3 1 chr10 41985561 41986066 -98330699 + (GAATG)n Satellite Satellite 1 685 0 780 154 0 0 chr10 41986086 41986261 -98330504 + (GAATG)n Satellite Satellite 1 175 0 738 153 0 0 chr10 41986302 41986465 -98330300 + (GAATG)n Satellite Satellite 2 164 0 953 159 3 2 chr10 41986481 41987942 -98328823 + (GAATG)n Satellite Satellite 1 1462 0 885 152 0 6 chr10 41987987 41988621 -98328144 + (GAATG)n Satellite Satellite 1 630 0 1044 160 0 4 chr10 41988646 41989878 -98326887 + (GAATG)n Satellite Satellite 1 1226 0 828 136 0 0 chr10 41989892 41990068 -98326697 + (GAATG)n Satellite Satellite 4 179 0 864 163 0 0 chr10 41990086 41990414 -98326351 + (GAATG)n Satellite Satellite 1 328 0 693 168 0 0 chr10 41990457 41990636 -98326129 + (GAATG)n Satellite Satellite 2 180 0 789 150 0 0 chr10 41990652 41990832 -98325933 + (GAATG)n Satellite Satellite 1 180 0 861 155 0 0 chr10 41990851 41991092 -98325673 + (GAATG)n Satellite Satellite 1 241 0 1082 115 3 14 chr10 41991123 41991491 -98325274 + (GAATG)n Satellite Satellite 1 364 0 747 147 0 0 chr10 41991539 41991702 -98325063 + (GAATG)n Satellite Satellite 4 166 0 638 162 0 27 chr10 41991730 41991915 -98324850 + (GAATG)n Satellite Satellite 1 180 0 1059 132 6 5 chr10 41991930 41992641 -98324124 + (GAATG)n Satellite Satellite 1 891 0 717 168 0 0 chr10 41992665 41992844 -98323921 + (GAATG)n Satellite Satellite 1 179 0 886 95 0 53 chr10 41992884 41993074 -98323691 + (GAATG)n Satellite Satellite 1 180 0 718 136 0 28 chr10 41993120 41993296 -98323469 + (GAATG)n Satellite Satellite 4 174 0 912 146 0 0 chr10 41993318 41993623 -98323142 + (GAATG)n Satellite Satellite 1 305 0 1044 111 0 0 chr10 41993664 41993844 -98322921 + (GAATG)n Satellite Satellite 1 180 0 906 159 2 0 chr10 41993860 41994328 -98322437 + (GAATG)n Satellite Satellite 1 469 0 1056 157 2 4 chr10 41994368 41995762 -98321003 + (GAATG)n Satellite Satellite 1 1389 0 1023 148 0 1 chr10 41995786 41996641 -98320124 + (GAATG)n Satellite Satellite 1 1033 0 1014 136 0 0 chr10 41996652 41997022 -98319743 + (GAATG)n Satellite Satellite 1 370 0 587 174 0 27 chr10 41997057 41997241 -98319524 + (GAATG)n Satellite Satellite 2 180 0 922 147 1 7 chr10 41997253 41998344 -98318421 + (GAATG)n Satellite Satellite 4 1261 0 978 142 0 7 chr10 41998379 41999084 -98317681 + (GAATG)n Satellite Satellite 1 879 0 833 153 0 15 chr10 41999123 41999455 -98317310 + (GAATG)n Satellite Satellite 1 326 0 909 144 3 3 chr10 41999468 41999828 -98316937 + (GAATG)n Satellite Satellite 1 360 0 1155 140 2 2 chr10 41999840 42000959 -98315806 + (GAATG)n Satellite Satellite 1 1299 0 963 101 0 0 chr10 42001001 42001160 -98315605 + (GAATG)n Satellite Satellite 2 160 0 567 238 12 24 chr10 42201200 42201364 -98115401 + LOR1-int LTR ERV1 477 638 -5308 * 1211 167 12 12 chr10 42201350 42201601 -98115164 + LOR1-int LTR ERV1 1080 1330 -4616 * 2050 122 37 61 chr10 42201598 42201976 -98114789 + LOR1-int LTR ERV1 2003 2371 -5166 350 132 0 0 chr10 42201977 42202030 -98114735 + LOR1-int LTR ERV1 2511 2563 -4974 3684 60 45 0 chr10 42202041 42202510 -98114255 + LTR2B LTR ERV1 1 490 0 2090 90 4 0 chr10 42202554 42202820 -98113945 + AluSp SINE Alu 31 297 -16 320 134 75 0 chr10 42202820 42202887 -98113878 + LOR1-int LTR ERV1 2558 2629 -4908 * 365 148 0 0 chr10 42202878 42202939 -98113826 + LOR1-int LTR ERV1 2162 2222 -3724 3471 128 10 2 chr10 42202939 42203508 -98113257 + MER41B LTR ERV1 55 557 0 817 180 86 43 chr10 42203560 42203912 -98112853 + LOR1-int LTR ERV1 3689 4498 -2292 773 259 0 0 chr10 42203915 42204073 -98112692 - AluJb SINE Alu -24 288 131 181 225 12 12 chr10 42204088 42204168 -98112597 + (TA)n Simple_repeat Simple_repeat 2 81 0 1119 50 0 0 chr10 42204272 42204413 -98112352 + L1PA3 LINE L1 6015 6155 0 333 336 186 0 chr10 42205007 42205147 -98111618 - MER5A DNA MER1_type -1 188 23 498 203 97 60 chr10 42205314 42205531 -98111234 + L1MC4 LINE L1 7281 7505 -537 2132 117 0 29 chr10 42205863 42206179 -98110586 - AluSx SINE Alu -4 308 2 241 220 120 47 chr10 42207259 42207409 -98109356 + HAL1 LINE L1 1365 1525 -982 463 320 59 72 chr10 42207528 42207919 -98108846 + HAL1 LINE L1 1699 2084 -423 682 191 0 8 chr10 42209450 42209576 -98107189 + MSTB LTR MaLR 1 125 -301 240 91 0 0 chr10 42211902 42211935 -98104830 + Alu SINE Alu 1 33 -275 2261 92 0 35 chr10 42211935 42212249 -98104516 + AluY SINE Alu 7 309 -2 538 280 50 50 chr10 42212429 42212629 -98104136 + MIR SINE MIR 9 208 -54 264 320 60 10 chr10 42212696 42212796 -98103969 - MER5A DNA MER1_type -30 159 55 706 229 109 5 chr10 42212805 42213006 -98103759 - L1MD3 LINE L1 -44 7951 7730 205 267 27 27 chr10 42213006 42213081 -98103684 - MER5A DNA MER1_type -114 75 1 1141 106 0 2 chr10 42214104 42214340 -98102425 + AluSg1 SINE Alu 2 292 -18 20952 29 6 5 chr10 42214455 42217774 -98098991 + L1PA3 LINE L1 2682 6006 -149 1852 169 11 0 chr10 42217774 42218147 -98098618 - L1 LINE L1 -1318 4828 4452 603 177 0 0 chr10 42218141 42218254 -98098511 + L1P LINE L1 3762 3874 -2272 * 1287 49 0 0 chr10 42218257 42218419 -98098346 - L1PA2 LINE L1 0 6155 5994 1916 37 4 8 chr10 42218746 42218987 -98097778 + L1PA5 LINE L1 5911 6150 -4 2328 98 0 0 chr10 42219050 42219346 -98097419 - AluSx SINE Alu -16 296 1 5399 99 32 15 chr10 42219347 42219971 -98096794 - MER41B-int LTR ERV1 -2968 4751 4106 1920 157 0 16 chr10 42219971 42220284 -98096481 - AluSx SINE Alu -4 308 1 5399 99 32 15 chr10 42220284 42220525 -98096240 - MER41B-int LTR ERV1 -3613 4106 3871 739 125 17 0 chr10 42220979 42221099 -98095666 - MER41B-int LTR ERV1 -4745 1201 1080 * 4068 125 11 5 chr10 42221094 42221719 -98095046 - MER41B-int LTR ERV1 -5317 629 1 3819 142 26 2 chr10 42221719 42222339 -98094426 - MER41B LTR ERV1 0 635 1 23 0 0 0 chr10 42222556 42222579 -98094186 + AT_rich Low_complexity Low_complexity 1 23 0 293 155 0 0 chr10 42222748 42222806 -98093959 - MER4B-int LTR ERV1 -3874 2884 2827 2072 114 3 10 chr10 42222862 42223160 -98093605 + AluSx SINE Alu 1 296 -16 1682 98 4 0 chr10 42223261 42223486 -98093279 + AluSq SINE Alu 82 307 -6 23 33 0 0 chr10 42223946 42223976 -98092789 + AT_rich Low_complexity Low_complexity 1 30 0 1232 181 104 30 chr10 42224039 42224309 -98092456 + AluSq SINE Alu 1 290 -23 1302 209 195 8 chr10 42224374 42224964 -98091801 + Charlie1 DNA MER1_type 1881 2580 -181 669 263 6 0 chr10 42224980 42225136 -98091629 + MER20 DNA MER1_type 60 216 -3 1751 164 0 17 chr10 42225771 42226064 -98090701 - AluSx SINE Alu -24 288 1 24 32 0 0 chr10 42226243 42226274 -98090491 + AT_rich Low_complexity Low_complexity 1 31 0 325 183 69 122 chr10 42226664 42226795 -98089970 - MIR3 SINE MIR -1 207 84 496 272 41 47 chr10 42226833 42227002 -98089763 - MER5B DNA MER1_type 0 178 11 2139 128 0 0 chr10 42227734 42228022 -98088743 - AluSq SINE Alu -25 288 1 6316 65 24 5 chr10 42228028 42228910 -98087855 - L1PA7 LINE L1 -2 6152 5254 22 70 0 0 chr10 42230201 42230244 -98086521 + AT_rich Low_complexity Low_complexity 1 43 0 2441 192 7 22 chr10 42231367 42231970 -98084795 - L1 LINE L1 -1685 4461 3868 40372 37 22 1 chr10 42231973 42238001 -98078764 + L1PA2 LINE L1 2 6155 0 603 177 0 0 chr10 42238004 42238117 -98078648 - L1P LINE L1 -2272 3874 3762 * 5291 157 25 3 chr10 42238111 42239771 -98076994 + L1PB1 LINE L1 4452 6149 -2 1035 164 18 0 chr10 42239894 42240065 -98076700 - AluJo SINE Alu -16 296 123 266 0 0 0 chr10 42240080 42240117 -98076648 - L1PA3 LINE L1 -3 6152 6116 239 132 0 0 chr10 42240117 42240155 -98076610 - AluJo SINE Alu -178 124 87 310 360 110 24 chr10 42240404 42240732 -98076033 + HAL1 LINE L1 4 359 -2148 293 277 218 39 chr10 42240876 42241161 -98075604 + HAL1 LINE L1 575 910 -1597 408 271 40 60 chr10 42241252 42241403 -98075362 + HAL1 LINE L1 1146 1293 -1214 282 236 101 27 chr10 42241422 42241570 -98075195 + HAL1 LINE L1 1367 1525 -982 537 315 54 67 chr10 42241689 42242080 -98074685 + HAL1 LINE L1 1699 2084 -423 255 222 56 0 chr10 42242233 42242305 -98074460 + HAL1 LINE L1 2097 2172 -335 1891 192 28 35 chr10 42243609 42243786 -98072979 + MSTB LTR MaLR 1 178 -248 21776 30 7 10 chr10 42243786 42247207 -98069558 + L1PA3 LINE L1 2734 6155 0 1891 192 28 35 chr10 42247207 42247451 -98069314 + MSTB LTR MaLR 178 419 -7 660 184 0 57 chr10 42248414 42248555 -98068210 + FLAM_A SINE Alu 1 133 0 183 211 19 39 chr10 42248767 42248819 -98067946 + MIR SINE MIR 99 149 -59 1690 94 4 0 chr10 42249182 42249417 -98067348 - L1PA8 LINE L1 -1 6171 5936 321 290 125 99 chr10 42250820 42251517 -98065248 + L1M2 LINE L1 561 1275 -5574 445 266 158 30 chr10 42252060 42252263 -98064502 - MIR SINE MIR 0 262 34 2187 153 27 21 chr10 42252289 42252662 -98064103 - THE1C LTR MaLR 0 375 1 232 314 162 29 chr10 42252772 42252835 -98063930 - MIR SINE MIR -9 253 200 2285 92 3 0 chr10 42252835 42253128 -98063637 - AluY SINE Alu -17 294 1 232 314 162 29 chr10 42253128 42253268 -98063497 - MIR SINE MIR -62 200 23 302 298 75 0 chr10 42254124 42254218 -98062547 + L2 LINE L2 3197 3297 -16 227 369 82 21 chr10 42254342 42254621 -98062144 - L2 LINE L2 -1486 1828 1533 2203 111 7 3 chr10 42255444 42255742 -98061023 - AluSg SINE Alu -11 299 1 354 340 0 48 chr10 42256014 42256161 -98060604 - L2 LINE L2 0 3313 3174 542 253 74 30 chr10 42256178 42256364 -98060401 - MLT1J LTR MaLR -211 300 60 1067 196 4 75 chr10 42259341 42259607 -98057158 + AluJb SINE Alu 21 267 -45 1464 228 21 34 chr10 42259628 42260006 -98056759 + MER93b LTR ERV1 1 373 0 2875 204 59 43 chr10 42260090 42260859 -98055906 + L1MC1 LINE L1 5558 6333 0 270 0 0 0 chr10 42261842 42261872 -98054893 + (CA)n Simple_repeat Simple_repeat 2 31 0 2114 137 0 0 chr10 42262068 42262374 -98054391 + AluSq SINE Alu 1 306 -7 218 179 0 15 chr10 42262808 42262875 -98053890 + (CA)n Simple_repeat Simple_repeat 2 67 0 736 240 32 5 chr10 42263285 42263478 -98053287 - MSTD LTR MaLR -11 418 216 251 196 89 80 chr10 42263547 42263659 -98053106 - L1MC5 LINE L1 -840 7121 7009 449 245 10 0 chr10 42263673 42263771 -98052994 - MSTD LTR MaLR -297 99 1 2740 146 43 5 chr10 42263777 42264222 -98052543 - MER4C LTR ERV1 -3 462 1 1277 263 70 48 chr10 42264224 42264791 -98051974 - L1MC5 LINE L1 -746 7215 6636 219 342 33 25 chr10 42265032 42265152 -98051613 + L2 LINE L2 3142 3262 -10 22 56 0 0 chr10 42265913 42265949 -98050816 + AT_rich Low_complexity Low_complexity 1 36 0 273 88 0 0 chr10 42265995 42266029 -98050736 + U6 snRNA snRNA 1 34 -73 2020 109 27 10 chr10 42266306 42266600 -98050165 + AluSx SINE Alu 1 299 -13 2354 106 0 3 chr10 42266963 42267275 -98049490 + AluSx SINE Alu 1 311 -1 340 212 11 123 chr10 42267447 42267495 -98049270 + L1MC4a LINE L1 5859 5911 -1897 201 74 0 0 chr10 42267495 42267522 -98049243 + (TA)n Simple_repeat Simple_repeat 2 28 0 340 212 11 123 chr10 42267522 42267652 -98049113 + L1MC4a LINE L1 5911 6017 -1791 2385 197 52 84 chr10 42267672 42267847 -98048918 + L1MC4a LINE L1 6246 6425 -1383 321 26 0 0 chr10 42267847 42267885 -98048880 + (CA)n Simple_repeat Simple_repeat 2 39 0 2385 197 52 84 chr10 42267885 42268385 -98048380 + L1MC4a LINE L1 6425 6899 -909 1948 105 91 108 chr10 42268388 42268805 -98047960 + LTR14B LTR ERVK 1 608 0 1933 236 102 79 chr10 42268807 42269698 -98047067 + L1MC4a LINE L1 6896 7807 -1 518 290 31 6 chr10 42270388 42270550 -98046215 - MER58A DNA MER1_type -12 212 47 766 222 33 22 chr10 42271527 42271707 -98045058 - Tigger2 DNA MER2_type -4 2714 2533 458 289 82 83 chr10 42273280 42273819 -98042946 - L1 LINE L1 -2368 3778 3241 323 208 136 45 chr10 42274066 42274330 -98042435 - L1 LINE L1 -2789 3357 3070 2053 101 42 3 chr10 42274344 42274631 -98042134 + AluSq SINE Alu 2 299 -14 306 356 0 0 chr10 42275325 42275429 -98041336 + (CA)n Simple_repeat Simple_repeat 2 105 0 869 217 0 0 chr10 42276755 42276930 -98039835 - AluJb SINE Alu -1 311 137 2304 110 10 0 chr10 42277440 42277750 -98039015 + AluSp SINE Alu 1 313 0 2266 119 0 3 chr10 42277752 42278054 -98038711 + AluSp SINE Alu 1 301 -12 1732 162 7 0 chr10 42278289 42278561 -98038204 + AluSx SINE Alu 1 274 -38 2132 108 0 3 chr10 42278657 42279018 -98037747 + AluSq SINE Alu 1 360 0 1066 193 57 34 chr10 42279446 42279710 -98037055 + MER92B LTR ERV1 2 271 -365 320 304 42 70 chr10 42280263 42280389 -98036376 - L2 LINE L2 -40 3273 3145 2269 103 3 6 chr10 42280389 42280701 -98036064 + AluY SINE Alu 1 311 0 320 304 42 70 chr10 42280701 42280860 -98035905 - L2 LINE L2 -168 3145 2996 1962 146 7 0 chr10 42281136 42281424 -98035341 + AluSx SINE Alu 1 290 -22 197 274 113 0 chr10 42282006 42282068 -98034697 + MIR SINE MIR 70 138 -70 335 172 35 0 chr10 42283022 42283080 -98033685 + MER2 DNA MER2_type 1 60 -285 2220 199 57 28 chr10 42283080 42283573 -98033192 + MER9 LTR ERVK 1 507 -4 33986 142 9 8 chr10 42283577 42288985 -98027780 + HERVK9 LTR ERVK 1 5181 -735 2096 256 56 44 chr10 42288962 42290662 -98026103 + HERVK9 LTR ERVK 3536 5912 -4 * 2197 196 61 26 chr10 42290665 42291159 -98025606 + MER9 LTR ERVK 1 511 0 427 333 0 0 chr10 42291162 42291282 -98025483 + MER8 DNA MER2_type 57 176 -63 314 225 28 0 chr10 42291312 42291383 -98025382 + MER8 DNA MER2_type 165 237 -2 3947 111 0 4 chr10 42291455 42291968 -98024797 + MER9 LTR ERVK 1 511 0 42623 74 21 17 chr10 42291968 42292735 -98024030 + HERVK9 LTR ERVK 1 763 -5153 191 228 0 88 chr10 42292735 42292792 -98023973 + MER5B DNA MER1_type 58 109 -69 42623 74 21 17 chr10 42292792 42293658 -98023107 + HERVK9 LTR ERVK 763 1624 -4292 2404 65 0 3 chr10 42293658 42293950 -98022815 + AluY SINE Alu 1 291 -20 42623 74 21 17 chr10 42293950 42294788 -98021977 + HERVK9 LTR ERVK 1624 2457 -3459 243 0 0 0 chr10 42294788 42294815 -98021950 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 42623 74 21 17 chr10 42294815 42297891 -98018874 + HERVK9 LTR ERVK 2457 5632 -284 2267 68 7 0 chr10 42297989 42298269 -98018496 + HERVK9 LTR ERVK 5635 5916 0 3820 119 0 4 chr10 42298269 42298782 -98017983 + MER9 LTR ERVK 1 511 0 455 139 56 0 chr10 42298895 42299006 -98017759 + AluSp/q SINE Alu 208 322 0 2261 108 0 9 chr10 42299136 42299451 -98017314 - AluSx SINE Alu 0 312 1 1202 237 124 5 chr10 42302216 42302626 -98014139 + L1MDa LINE L1 1970 2428 -4112 3730 117 4 12 chr10 42302630 42303145 -98013620 - MER9 LTR ERVK 0 511 1 2208 123 4 3 chr10 42303145 42303468 -98013297 - HERVK9 LTR ERVK 0 5916 4936 7559 114 2 8 chr10 42303523 42304582 -98012183 - HERVK9 LTR ERVK -282 5634 4582 1612 81 45 5 chr10 42304581 42304803 -98011962 - HERVK9 LTR ERVK -1975 3941 3711 * 10687 71 4 1 chr10 42304803 42306221 -98010544 - HERVK9 LTR ERVK -3130 2786 1268 4285 75 52 0 chr10 42306221 42306784 -98009981 - HERVK9 LTR ERVK -5324 592 1 3984 105 0 4 chr10 42306784 42307297 -98009468 - MER9 LTR ERVK 0 511 1 1295 152 134 122 chr10 42308316 42308750 -98008015 - LOR1a LTR ERV1 0 497 59 1758 144 155 43 chr10 42308750 42309124 -98007641 + MSTA LTR MaLR 4 419 -9 330 154 0 132 chr10 42309116 42309207 -98007558 - LOR1a LTR ERV1 -418 79 1 * 560 226 211 88 chr10 42309394 42309862 -98006903 - L1M4 LINE L1 -766 5380 4855 225 270 0 0 chr10 42309955 42310018 -98006747 - L1M4 LINE L1 -1542 4604 4542 6505 101 52 8 chr10 42310186 42311190 -98005575 - L1MA3 LINE L1 0 6305 5258 647 215 31 8 chr10 42311209 42311339 -98005426 + MSTA LTR MaLR 1 133 -293 798 98 16 8 chr10 42311480 42311602 -98005163 - L1MA3 LINE L1 0 6305 6183 1571 150 39 0 chr10 42311616 42311876 -98004889 + MSTA LTR MaLR 159 428 0 3308 168 34 2 chr10 42311876 42312490 -98004275 - L1 LINE L1 -903 5243 4610 1821 176 7 7 chr10 42312540 42312842 -98003923 - AluJb SINE Alu -10 302 1 758 271 209 8 chr10 42312843 42313212 -98003553 - L1MC4 LINE L1 -1129 6913 6471 607 261 73 41 chr10 42313423 42313764 -98003001 - L1 LINE L1 -2299 3847 3496 1799 164 39 0 chr10 42314376 42314657 -98002108 - AluSx SINE Alu -20 292 1 2295 82 41 0 chr10 42315227 42315519 -98001246 + AluY SINE Alu 7 310 -1 1866 181 0 0 chr10 42317930 42318217 -97998548 - AluSx SINE Alu -25 287 1 205 293 0 35 chr10 42318866 42318924 -97997841 - MER5A DNA MER1_type -18 171 116 1410 175 13 80 chr10 42318969 42319283 -97997482 - AluJo SINE Alu -17 295 3 23 0 0 0 chr10 42319363 42319386 -97997379 + AT_rich Low_complexity Low_complexity 1 23 0 421 217 50 89 chr10 42319389 42319569 -97997196 + L1ME3 LINE L1 5990 6162 0 252 0 0 0 chr10 42319961 42319989 -97996776 + (CA)n Simple_repeat Simple_repeat 2 29 0 391 214 34 0 chr10 42321036 42321125 -97995640 - Charlie7 DNA MER1_type -2470 142 51 1670 120 0 0 chr10 42321609 42321834 -97994931 + AluSx SINE Alu 63 287 -25 2172 116 13 7 chr10 42321943 42322253 -97994512 + AluSq SINE Alu 1 312 -1 479 254 34 54 chr10 42322461 42322492 -97994273 + L1M4c LINE L1 611 641 -6005 948 78 86 0 chr10 42322492 42322620 -97994145 + MER85 DNA T2_type 1 139 0 479 254 34 54 chr10 42322620 42322755 -97994010 + L1M4c LINE L1 641 926 -5720 252 0 0 0 chr10 42322759 42322787 -97993978 + (TTA)n Simple_repeat Simple_repeat 3 30 0 42843 43 24 1 chr10 42322787 42328780 -97987985 - L1PA3 LINE L1 -18 6137 2 296 203 0 0 chr10 42328877 42328941 -97987824 + T-rich Low_complexity Low_complexity 1 64 0 3404 233 62 19 chr10 42328962 42330094 -97986671 + L1M4c LINE L1 829 2015 -4631 508 115 52 21 chr10 42330230 42330326 -97986439 + L1MA3 LINE L1 6032 6130 -175 * 32939 105 13 54 chr10 42330306 42336720 -97980045 - L1PA7 LINE L1 -5 6149 10 1089 110 58 31 chr10 42336732 42336923 -97979842 + L1MA3 LINE L1 6110 6305 0 5921 239 69 32 chr10 42336936 42339079 -97977686 + L1M4c LINE L1 2696 4916 -1728 655 204 35 14 chr10 42339079 42339221 -97977544 + MLT1A1 LTR MaLR 1 145 -220 2221 117 3 0 chr10 42339511 42339809 -97976956 + AluSp SINE Alu 1 299 -14 1762 184 103 19 chr10 42339832 42340261 -97976504 + L1MC4 LINE L1 6464 6928 -1114 3711 237 57 42 chr10 42340457 42342673 -97974092 + L1MB2 LINE L1 330 2681 -3963 2121 127 0 35 chr10 42342673 42342988 -97973777 + AluSg SINE Alu 1 304 -6 3711 237 57 42 chr10 42342988 42343250 -97973515 + L1MB2 LINE L1 2681 2938 -3706 * 4911 175 38 9 chr10 42343249 42344585 -97972180 + L1MB2 LINE L1 5119 6633 -36 1136 224 47 16 chr10 42344595 42344917 -97971848 + L1MB5 LINE L1 4077 4408 -1738 829 189 33 7 chr10 42344917 42345070 -97971695 - MER58B DNA MER1_type -43 298 142 698 203 80 47 chr10 42345070 42345346 -97971419 + L1MB5 LINE L1 4387 4671 -1475 3114 150 36 54 chr10 42345348 42345962 -97970803 + L1MB5 LINE L1 5566 6168 -6 2456 92 0 0 chr10 42346128 42346434 -97970331 - AluSg SINE Alu -4 306 1 1476 231 55 9 chr10 42346682 42347007 -97969758 - MER58B DNA MER1_type 0 341 2 2270 103 0 3 chr10 42347556 42347857 -97968908 - AluSg SINE Alu -9 301 2 1600 141 11 40 chr10 42350040 42350199 -97966566 + L1PB3 LINE L1 5878 6027 -127 2024 123 44 0 chr10 42350199 42350492 -97966273 + AluSq SINE Alu 1 306 -7 1600 141 11 40 chr10 42350492 42350608 -97966157 + L1PB3 LINE L1 6027 6145 -9 2393 67 0 10 chr10 42350677 42350974 -97965791 - AluSc SINE Alu -15 294 1 2300 101 13 0 chr10 42351159 42351465 -97965300 - AluSg SINE Alu 0 310 1 2133 125 0 3 chr10 42351513 42351809 -97964956 - AluSx SINE Alu -17 295 1 1415 169 154 0 chr10 42353035 42353295 -97963470 - AluSx SINE Alu -12 300 1 1837 148 13 26 chr10 42354605 42354915 -97961850 - AluSx SINE Alu -6 306 1 2144 142 0 10 chr10 42355319 42355630 -97961135 + AluSc SINE Alu 1 308 -1 2164 213 80 10 chr10 42355658 42356160 -97960605 + MER68 LTR ERV1 26 562 0 1616 154 0 68 chr10 42356190 42356483 -97960282 - AluJo SINE Alu -39 273 1 321 241 128 15 chr10 42356534 42356667 -97960098 + HERVL68 LTR ERVL 2 149 -2888 269 279 0 70 chr10 42356749 42356835 -97959930 + HERVL68 LTR ERVL 347 426 -2611 180 97 0 0 chr10 42356856 42356887 -97959878 + (TGGG)n Simple_repeat Simple_repeat 1 31 0 2454 194 64 41 chr10 42356985 42357625 -97959140 + HERVL68 LTR ERVL 598 1252 -1785 5735 124 26 20 chr10 42357954 42358860 -97957905 + MER49 LTR ERV1 1 912 -11 2099 128 0 0 chr10 42358862 42359189 -97957576 - AluSq SINE Alu 0 327 1 1716 99 21 4 chr10 42359441 42359684 -97957081 - L1PA13 LINE L1 -2 6161 5915 1092 152 0 0 chr10 42359684 42359849 -97956916 + L1PA12 LINE L1 1949 2113 -5468 648 293 60 7 chr10 42359886 42360391 -97956374 + MLT1G LTR MaLR 1 561 -29 196 297 27 0 chr10 42360581 42360655 -97956110 - MIR SINE MIR -10 252 177 462 285 109 65 chr10 42361799 42362339 -97954426 + HSATI Satellite Satellite 1 564 -13 254 265 31 10 chr10 42362420 42362518 -97954247 + L1M4 LINE L1 3652 3751 -2395 29 90 0 0 chr10 42362610 42362688 -97954077 + AT_rich Low_complexity Low_complexity 1 78 0 357 196 26 96 chr10 42362688 42362851 -97953914 + MER4B-int LTR ERV1 2555 2728 -2395 2325 77 3 0 chr10 42362851 42363138 -97953627 + AluY SINE Alu 1 288 -23 243 0 0 0 chr10 42363141 42363168 -97953597 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 357 196 26 96 chr10 42363168 42363185 -97953580 + MER4B-int LTR ERV1 2679 2696 -2427 22 0 0 0 chr10 42363195 42363217 -97953548 + AT_rich Low_complexity Low_complexity 1 22 0 346 138 15 0 chr10 42364256 42364321 -97952444 + MER4B-int LTR ERV1 2406 2471 -4287 467 262 47 26 chr10 42364412 42364603 -97952162 + MER4B-int LTR ERV1 3536 3730 -2868 626 65 39 0 chr10 42364611 42364688 -97952077 + MADE1 DNA Mariner 1 80 0 414 171 16 24 chr10 42364731 42364851 -97951914 + MER4B-int LTR ERV1 3698 4457 -423 2198 164 64 3 chr10 42365110 42365487 -97951278 + MSTA LTR MaLR 1 400 -28 2271 109 7 0 chr10 42365508 42365801 -97950964 - AluSg SINE Alu -15 295 1 241 154 0 0 chr10 42365801 42365840 -97950925 + MSTA LTR MaLR 390 428 0 9529 166 28 29 chr10 42365840 42366244 -97950521 + MSTA-int LTR MaLR 1 404 -1247 1508 210 0 11 chr10 42366244 42366571 -97950194 + AluJb SINE Alu 1 324 0 9529 166 28 29 chr10 42366571 42367817 -97948948 + MSTA-int LTR MaLR 404 1651 0 2740 150 31 0 chr10 42367817 42368231 -97948534 + MSTA LTR MaLR 1 427 -1 271 336 0 27 chr10 42368504 42368614 -97948151 + MIR SINE MIR 41 147 -61 304 310 110 45 chr10 42368809 42369054 -97947711 - MIR SINE MIR -1 261 1 635 228 83 10 chr10 42369696 42369889 -97946876 - L1MC2 LINE L1 0 6344 6138 3085 121 36 16 chr10 42370166 42370664 -97946101 - MER49 LTR ERV1 -415 508 1 513 216 197 56 chr10 42371868 42372081 -97944684 + MLT1C LTR MaLR 263 467 0 213 39 0 0 chr10 42372270 42372296 -97944469 + (TA)n Simple_repeat Simple_repeat 2 27 0 1942 125 7 17 chr10 42372296 42372455 -97944310 - AluSx SINE Alu -19 293 137 2013 86 8 0 chr10 42372455 42372711 -97944054 - AluSq SINE Alu -17 296 39 1942 125 7 17 chr10 42372711 42372847 -97943918 - AluSx SINE Alu -175 137 1 243 196 43 0 chr10 42373204 42373250 -97943515 - MER5A DNA MER1_type -83 106 59 2333 111 0 0 chr10 42373409 42373715 -97943050 + AluSx SINE Alu 1 306 -6 229 179 60 30 chr10 42373738 42373805 -97942960 - MER76 LTR ERV -18 670 602 928 149 0 7 chr10 42375766 42375914 -97940851 - L1PA16 LINE L1 -9 6157 6011 2047 146 10 0 chr10 42376788 42377096 -97939669 - AluSx SINE Alu -1 311 1 1748 108 104 0 chr10 42377199 42377484 -97939281 + AluSg1 SINE Alu 3 313 0 2025 108 77 0 chr10 42377762 42378048 -97938717 + AluSq SINE Alu 1 308 -5 2168 123 0 3 chr10 42378391 42378692 -97938073 + AluSx SINE Alu 1 300 -12 2286 98 3 0 chr10 42381084 42381379 -97935386 - AluSq SINE Alu -17 296 1 2416 70 13 0 chr10 42382709 42383007 -97933758 - AluY SINE Alu -9 302 1 649 149 0 37 chr10 42383007 42383114 -97933651 - FRAM SINE Alu -20 156 54 795 216 14 110 chr10 42383373 42383749 -97933016 - MLT1A1 LTR MaLR 0 428 39 1906 104 12 0 chr10 42383757 42384027 -97932738 - AluSx SINE Alu 0 301 29 245 95 0 48 chr10 42384109 42384151 -97932614 - MLT1A1 LTR MaLR -386 42 3 1863 262 32 2 chr10 42385036 42385529 -97931236 - LTR53 LTR ERVL -1 518 11 2415 165 76 34 chr10 42385695 42386197 -97930568 - L1MC2 LINE L1 -11 6333 5811 1664 230 52 30 chr10 42386183 42386687 -97930078 - L1M4 LINE L1 -1820 4326 3812 * 1101 229 23 11 chr10 42386688 42386950 -97929815 - L1M4 LINE L1 -2391 3755 3491 1268 116 0 6 chr10 42386954 42387126 -97929639 - AluSg/x SINE Alu -23 289 119 1097 235 122 10 chr10 42387143 42387552 -97929213 - L1M4 LINE L1 -2640 3506 3052 272 322 55 20 chr10 42387825 42387971 -97928794 + MER115 DNA AcHobo 317 467 -226 346 260 65 24 chr10 42387976 42388099 -97928666 + Zaphod DNA AcHobo 3904 4031 0 207 100 0 0 chr10 42388489 42388519 -97928246 + (CA)n Simple_repeat Simple_repeat 1 30 0 460 205 121 42 chr10 42388529 42388719 -97928046 + L1MD3 LINE L1 7789 7993 -2 191 35 0 35 chr10 42391429 42391458 -97925307 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 873 232 130 40 chr10 42392058 42392476 -97924289 + MLT1B LTR MaLR 1 386 -4 27 29 0 0 chr10 42392632 42392666 -97924099 + AT_rich Low_complexity Low_complexity 1 34 0 1734 267 83 35 chr10 42392910 42393763 -97923002 - L1MEc LINE L1 -1389 4826 3933 5335 208 107 36 chr10 42393768 42395242 -97921523 - MER45R DNA AcHobo 0 1581 4 1675 250 164 22 chr10 42395244 42395976 -97920789 - L1MEc LINE L1 -2279 3936 3101 226 164 36 0 chr10 42395997 42396052 -97920713 + (TA)n Simple_repeat Simple_repeat 2 58 0 22 0 0 0 chr10 42396092 42396114 -97920651 + AT_rich Low_complexity Low_complexity 1 22 0 406 197 66 33 chr10 42396250 42396372 -97920393 + L1M4 LINE L1 3033 3158 -2988 1778 255 69 42 chr10 42396429 42397238 -97919527 - L1MEc LINE L1 -3185 3030 2200 3167 273 65 50 chr10 42397274 42398027 -97918738 - L1MEc LINE L1 -4401 1995 1255 2153 125 7 3 chr10 42398027 42398330 -97918435 - AluSc SINE Alu -5 304 1 3167 273 65 50 chr10 42398330 42398464 -97918301 - L1MEc LINE L1 -5141 1255 1124 1835 138 0 45 chr10 42398464 42398775 -97917990 - AluJb SINE Alu -5 307 11 3167 273 65 50 chr10 42398775 42399496 -97917269 - L1MEc LINE L1 -5272 1124 362 3401 234 63 82 chr10 42399496 42400721 -97916044 + L1M4b LINE L1 -228 1018 -5262 2157 121 7 7 chr10 42400721 42401028 -97915737 + AluSx SINE Alu 1 307 -5 3401 234 63 82 chr10 42401028 42401189 -97915576 + L1M4b LINE L1 1018 1108 -5172 2083 118 0 26 chr10 42401189 42401502 -97915263 + AluSq SINE Alu 1 305 -8 3401 234 63 82 chr10 42401502 42401714 -97915051 + L1M4b LINE L1 1108 1322 -4958 414 263 10 0 chr10 42401717 42401816 -97914949 + U6 snRNA snRNA 2 101 -6 26 0 0 0 chr10 42401816 42401842 -97914923 + AT_rich Low_complexity Low_complexity 1 26 0 509 258 69 92 chr10 42401867 42402367 -97914398 + L1M4b LINE L1 1454 2103 -4460 1669 186 17 24 chr10 42402372 42402668 -97914097 + AluJb SINE Alu 1 294 -18 233 228 0 0 chr10 42402677 42402734 -97914031 + A-rich Low_complexity Low_complexity 1 57 0 2123 135 0 0 chr10 42402741 42403037 -97913728 + AluSx SINE Alu 1 296 -16 384 221 97 94 chr10 42403057 42403196 -97913569 + L1MEc LINE L1 1731 1868 -4528 1067 149 75 6 chr10 42403196 42403370 -97913395 + L1PA8A LINE L1 5946 6131 0 384 221 97 94 chr10 42403370 42403398 -97913367 + L1MEc LINE L1 1868 1894 -4502 1431 129 47 34 chr10 42403398 42403631 -97913134 - MER46A DNA MER2_type 0 236 1 384 221 97 94 chr10 42403631 42403888 -97912877 + L1MEc LINE L1 1894 2145 -4251 1214 165 33 19 chr10 42403888 42404100 -97912665 + L1PB4 LINE L1 5942 6156 0 384 221 97 94 chr10 42404100 42404197 -97912568 + L1MEc LINE L1 2145 2240 -4156 311 200 15 15 chr10 42404197 42404262 -97912503 - Tigger5 DNA MER2_type 0 2323 2259 349 182 0 0 chr10 42404366 42404421 -97912344 - Tigger5 DNA MER2_type -2268 55 1 7843 252 89 24 chr10 42404447 42405696 -97911069 + L1MEc LINE L1 2224 3391 -2824 1907 163 3 10 chr10 42405696 42406003 -97910762 + AluJb SINE Alu 5 309 -3 7843 252 89 24 chr10 42406003 42406812 -97909953 + L1MEc LINE L1 3391 4146 -2069 1994 137 0 7 chr10 42406812 42407120 -97909645 + AluSq SINE Alu 1 306 0 7843 252 89 24 chr10 42407120 42407621 -97909144 + L1MEc LINE L1 4146 4613 -1602 2171 119 16 10 chr10 42407621 42407924 -97908841 + AluSg SINE Alu 1 305 -5 7843 252 89 24 chr10 42407924 42408351 -97908414 + L1MEc LINE L1 4613 5407 -808 2336 257 98 34 chr10 42408345 42408792 -97907973 - L1M4 LINE L1 -1820 4562 4145 * 2061 136 3 3 chr10 42408792 42409094 -97907671 - AluSx SINE Alu -10 302 1 2336 257 98 34 chr10 42409094 42409533 -97907232 - L1M4 LINE L1 -2237 4145 3619 2670 188 60 53 chr10 42409550 42409822 -97906943 + L1MC3 LINE L1 6179 6447 -1338 1926 166 0 7 chr10 42409822 42410129 -97906636 + AluSx SINE Alu 1 305 -7 2670 188 60 53 chr10 42410129 42410536 -97906229 + L1MC3 LINE L1 6447 6863 -922 2878 196 47 7 chr10 42410551 42411152 -97905613 + L1MC3 LINE L1 7124 7748 -37 3240 211 31 51 chr10 42411170 42411234 -97905531 + L1MB8 LINE L1 5334 5398 -780 2271 99 3 0 chr10 42411234 42411528 -97905237 + AluSg SINE Alu 3 297 -13 3240 211 31 51 chr10 42411528 42412200 -97904565 + L1MB8 LINE L1 5398 6082 -96 2034 131 0 7 chr10 42412200 42412491 -97904274 + AluSx SINE Alu 1 289 -23 1677 113 58 91 chr10 42412499 42412808 -97903957 + AluSx SINE Alu 1 299 -13 3240 211 31 51 chr10 42412808 42412910 -97903855 + L1MB8 LINE L1 6089 6165 -13 2271 88 3 3 chr10 42413258 42413552 -97903213 - AluSc SINE Alu -15 294 1 3219 211 73 24 chr10 42413620 42413651 -97903114 - L1MD2 LINE L1 0 6359 6331 2220 135 0 0 chr10 42413651 42413962 -97902803 - AluJb SINE Alu -1 311 1 3219 211 73 24 chr10 42413962 42414361 -97902404 - L1MD2 LINE L1 -28 6331 5953 1224 256 84 20 chr10 42414361 42414755 -97902010 + LTR52 LTR ERVL 1 419 -2 3219 211 73 24 chr10 42414755 42415163 -97901602 - L1MD2 LINE L1 -406 5953 5479 670 262 71 8 chr10 42415199 42415466 -97901299 - L1M4 LINE L1 -4946 1438 1155 334 138 30 63 chr10 42415503 42415602 -97901163 - L1M4 LINE L1 -5406 878 783 367 283 71 27 chr10 42415640 42415824 -97900941 + L1MB4 LINE L1 15 206 -6336 1689 237 46 69 chr10 42415824 42416490 -97900275 + L1MB4 LINE L1 1764 2444 -4200 2000 148 0 10 chr10 42416490 42416793 -97899972 + AluSx SINE Alu 1 300 -12 1689 237 46 69 chr10 42416793 42416966 -97899799 + L1MB4 LINE L1 2444 2619 -4025 1540 151 50 29 chr10 42416966 42417245 -97899520 - AluJb SINE Alu -17 295 11 1689 237 46 69 chr10 42417245 42417600 -97899165 + L1MB4 LINE L1 2619 3043 -3601 1295 196 37 51 chr10 42417602 42417898 -97898867 + AluJo SINE Alu 1 292 -20 204 40 0 0 chr10 42417908 42417933 -97898832 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 3881 241 29 36 chr10 42417982 42419153 -97897612 + L1MB4 LINE L1 4241 5403 -1241 592 204 82 7 chr10 42419166 42419313 -97897452 + L1MB4 LINE L1 5896 6053 -127 549 223 94 58 chr10 42419319 42419543 -97897222 + L1MB4 LINE L1 5404 5635 -1009 2079 115 10 0 chr10 42419544 42419832 -97896933 + AluSx SINE Alu 1 291 -21 2265 202 103 9 chr10 42419855 42420410 -97896355 + L1MB4 LINE L1 6070 6676 -2 5984 233 60 65 chr10 42420426 42420493 -97896272 - L1MDa LINE L1 -1222 5318 5252 1523 197 43 48 chr10 42420493 42420869 -97895896 - MLT1A2 LTR MaLR 0 374 1 5984 233 60 65 chr10 42420869 42420988 -97895777 - L1MDa LINE L1 -1288 5252 5134 2985 174 66 2 chr10 42420988 42421505 -97895260 - MER44D DNA MER2_type 0 605 1 5984 233 60 65 chr10 42421505 42421597 -97895168 - L1MDa LINE L1 -1406 5134 5043 207 0 0 0 chr10 42421597 42421620 -97895145 + (TA)n Simple_repeat Simple_repeat 2 24 0 5984 233 60 65 chr10 42421620 42422025 -97894740 - L1MDa LINE L1 -1497 5043 4638 2196 114 23 0 chr10 42422025 42422331 -97894434 - AluSp SINE Alu 0 313 1 5984 233 60 65 chr10 42422331 42422966 -97893799 - L1MDa LINE L1 -1902 4638 4001 2065 126 0 0 chr10 42422966 42423244 -97893521 + AluSg SINE Alu 1 278 -32 368 20 0 20 chr10 42423244 42423294 -97893471 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 5984 233 60 65 chr10 42423294 42423561 -97893204 - L1MDa LINE L1 -2538 4002 3735 2185 120 0 3 chr10 42423561 42423862 -97892903 - AluSx SINE Alu -12 300 1 5984 233 60 65 chr10 42423862 42424575 -97892190 - L1MDa LINE L1 -2805 3735 3026 1971 167 3 0 chr10 42424575 42424874 -97891891 - AluSx SINE Alu -12 300 1 5984 233 60 65 chr10 42424874 42425242 -97891523 - L1MDa LINE L1 -3514 3026 2658 773 181 6 19 chr10 42425283 42425443 -97891322 + L1M1 LINE L1 19 176 -7389 4700 117 39 15 chr10 42425443 42426160 -97890605 + L1MA2 LINE L1 5571 6304 0 3094 219 139 12 chr10 42426163 42427156 -97889609 - L1MDa LINE L1 -3926 2614 1496 572 339 85 3 chr10 42427171 42427638 -97889127 + L2 LINE L2 2541 3055 -258 2185 118 23 0 chr10 42427752 42428057 -97888708 - AluSx SINE Alu 0 312 1 2270 94 0 7 chr10 42430244 42430543 -97886222 + AluSq SINE Alu 1 297 -16 1896 138 39 7 chr10 42430681 42430964 -97885801 + AluSq SINE Alu 1 292 -21 306 256 146 7 chr10 42430966 42431103 -97885662 + L1M4 LINE L1 4548 4703 -1443 400 259 128 30 chr10 42431167 42431472 -97885293 + L1M4 LINE L1 4807 5141 -1005 470 196 74 128 chr10 42431477 42431523 -97885242 - MER58B DNA MER1_type -2080 340 293 1907 140 27 0 chr10 42431523 42431815 -97884950 + AluSx SINE Alu 1 300 -12 470 196 74 128 chr10 42431815 42431916 -97884849 - MER58B DNA MER1_type -2127 293 201 2077 106 4 0 chr10 42432111 42432385 -97884380 + AluSg SINE Alu 24 298 -12 2363 93 0 0 chr10 42432407 42432708 -97884057 + AluSc SINE Alu 1 301 -8 21 0 0 0 chr10 42432773 42432794 -97883971 + AT_rich Low_complexity Low_complexity 1 21 0 1820 129 10 29 chr10 42433098 42433409 -97883356 + AluSx SINE Alu 1 305 -7 214 291 81 35 chr10 42434055 42434141 -97882624 + MIR3 SINE MIR 14 103 -105 1940 118 37 0 chr10 42434214 42434510 -97882255 - AluSp SINE Alu -6 307 1 1597 173 27 20 chr10 42436160 42436455 -97880310 + AluJo SINE Alu 1 297 -15 2261 115 0 0 chr10 42436584 42436889 -97879876 + AluSc SINE Alu 1 305 -4 1253 222 38 26 chr10 42436944 42437286 -97879479 - L1ME1 LINE L1 -15 6151 5806 1599 180 63 30 chr10 42437286 42437736 -97879029 - LTR10B LTR ERV1 0 547 1 291 304 20 0 chr10 42437736 42437838 -97878927 - L1ME1 LINE L1 -357 5809 5706 2285 181 99 31 chr10 42437928 42438413 -97878352 - MLT2B1 LTR ERVL 0 520 3 2074 105 43 23 chr10 42438431 42438735 -97878030 - AluSp SINE Alu -3 310 1 5879 173 20 18 chr10 42438824 42439991 -97876774 - L1MA5 LINE L1 0 6300 5137 1926 159 3 0 chr10 42439991 42440293 -97876472 - AluJb SINE Alu -9 303 1 1806 134 57 33 chr10 42440302 42440601 -97876164 - AluSc SINE Alu -3 306 1 5879 173 20 18 chr10 42440601 42440855 -97875910 - L1MA5 LINE L1 -1170 5130 4865 520 291 142 13 chr10 42440947 42441263 -97875502 - LTR50 LTR ERVL -3 792 436 576 162 77 8 chr10 42441407 42441524 -97875241 + L1MB7 LINE L1 6041 6165 -19 644 110 0 0 chr10 42441535 42441617 -97875148 - AluSc SINE Alu -17 292 211 488 216 117 95 chr10 42441743 42442135 -97874630 + LTR15 LTR ERV1 112 596 0 24046 264 39 54 chr10 42442135 42451001 -97865764 + HERV15 LTR ERV1 1 8732 -3 481 241 63 85 chr10 42451089 42451527 -97865238 + LTR15 LTR ERV1 112 493 0 1549 126 0 0 chr10 42451527 42451741 -97865024 - AluSc SINE Alu -95 214 1 1900 155 3 3 chr10 42451905 42452201 -97864564 + AluSq SINE Alu 1 296 -17 2291 106 3 0 chr10 42452206 42452499 -97864266 + AluSp SINE Alu 3 296 -17 269 294 0 0 chr10 42453284 42453352 -97863413 + (TG)n Simple_repeat Simple_repeat 2 69 0 189 0 0 0 chr10 42453352 42453373 -97863392 + (CA)n Simple_repeat Simple_repeat 2 22 0 506 240 50 88 chr10 42453374 42453675 -97863090 - MLT2B1 LTR ERVL -40 470 116 709 211 72 11 chr10 42453766 42453946 -97862819 - L1PB4 LINE L1 0 6156 5966 3481 232 39 10 chr10 42453948 42455225 -97861540 + L1MA6 LINE L1 4497 5839 -461 189 0 0 0 chr10 42455225 42455246 -97861519 + (CA)n Simple_repeat Simple_repeat 2 22 0 3481 232 39 10 chr10 42455246 42455722 -97861043 + L1MA6 LINE L1 5839 6300 0 2004 129 14 0 chr10 42455727 42456013 -97860752 + AluSx SINE Alu 1 290 -22 1501 259 35 7 chr10 42456024 42456483 -97860282 + L1MCa LINE L1 134 605 -5821 424 231 51 0 chr10 42456542 42456659 -97860106 + L1MCa LINE L1 573 695 -5731 199 0 65 0 chr10 42457165 42457196 -97859569 + (TA)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr10 42457774 42457800 -97858965 + AT_rich Low_complexity Low_complexity 1 26 0 1055 211 33 11 chr10 42458812 42459082 -97857683 - L1MA9 LINE L1 -217 6095 5820 264 224 0 0 chr10 42459099 42459166 -97857599 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 207 0 0 0 chr10 42459174 42459197 -97857568 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1318 223 45 0 chr10 42459205 42459452 -97857313 - AluJo SINE Alu -54 258 1 2259 238 61 41 chr10 42459476 42460366 -97856399 - L1MA9 LINE L1 -556 5756 4885 312 83 0 0 chr10 42460366 42460414 -97856351 + (TA)n Simple_repeat Simple_repeat 2 49 0 2259 238 61 41 chr10 42460414 42460797 -97855968 - L1MA9 LINE L1 -1427 4885 4409 262 77 0 0 chr10 42460797 42460836 -97855929 + MADE1 DNA Mariner 1 39 -41 2259 238 61 41 chr10 42460836 42460995 -97855770 - L1MA9 LINE L1 -1903 4409 4255 42077 40 1 4 chr10 42461674 42467845 -97848920 + L1PA4 LINE L1 3 6152 -3 392 266 68 16 chr10 42467916 42468168 -97848597 + L1M4 LINE L1 4265 4529 -1617 * 701 160 0 30 chr10 42468167 42468298 -97848467 + L1MA2 LINE L1 6156 6282 -22 477 259 18 27 chr10 42468310 42468530 -97848235 + L1M4 LINE L1 4533 4750 -1396 1708 251 22 34 chr10 42468536 42469033 -97847732 + LTR42 LTR ERVL 2 492 -3 185 343 78 108 chr10 42469342 42469546 -97847219 - L2 LINE L2 -50 3222 3025 1523 201 67 31 chr10 42469886 42470105 -97846660 + MER6A DNA MER2_type 1 240 -625 330 26 0 0 chr10 42470105 42470144 -97846621 + (TG)n Simple_repeat Simple_repeat 2 40 0 1523 201 67 31 chr10 42470144 42470283 -97846482 + MER6A DNA MER2_type 240 372 -233 1812 146 7 32 chr10 42470616 42470925 -97845840 + AluSx SINE Alu 1 301 -11 2014 131 0 3 chr10 42471180 42471463 -97845302 - AluSx SINE Alu -30 282 1 945 152 104 24 chr10 42471482 42471693 -97845072 + MER6A DNA MER2_type 375 602 -3 1975 134 7 0 chr10 42472751 42473060 -97843705 + AluSx SINE Alu 1 311 0 481 152 0 0 chr10 42473357 42473449 -97843316 + L1PB1 LINE L1 6060 6151 0 1601 193 27 7 chr10 42473717 42474013 -97842752 + AluJb SINE Alu 1 302 -10 370 205 145 0 chr10 42474015 42474098 -97842667 + L1MB8 LINE L1 5498 5571 -613 625 185 0 0 chr10 42474134 42474242 -97842523 - FLAM_C SINE Alu -35 108 1 1800 221 48 50 chr10 42474242 42474803 -97841962 + L1MB8 LINE L1 5556 6115 -63 280 167 28 0 chr10 42474803 42474875 -97841890 + CT-rich Low_complexity Low_complexity 1 74 0 1299 236 7 7 chr10 42474875 42475155 -97841610 - AluJb SINE Alu -32 280 1 22 0 0 0 chr10 42475205 42475227 -97841538 + AT_rich Low_complexity Low_complexity 1 22 0 2166 122 0 10 chr10 42475228 42475532 -97841233 + AluSx SINE Alu 1 301 -11 1324 196 4 32 chr10 42475536 42475817 -97840948 + AluJo SINE Alu 1 273 -39 312 200 11 95 chr10 42476148 42476243 -97840522 - AluJo SINE Alu -130 172 86 887 219 0 57 chr10 42476243 42476471 -97840294 - AluJo SINE Alu -92 220 6 915 257 84 26 chr10 42476567 42476586 -97840179 + L2 LINE L2 2541 2557 -756 2244 113 0 3 chr10 42476586 42476897 -97839868 + AluSg SINE Alu 1 310 0 915 257 84 26 chr10 42476897 42477329 -97839436 + L2 LINE L2 2557 3095 -218 1157 208 62 22 chr10 42477335 42477609 -97839156 - AluJb SINE Alu -13 289 5 1398 183 25 61 chr10 42477623 42477984 -97838781 - MLT1D LTR MaLR -8 497 150 557 172 52 0 chr10 42477990 42478106 -97838659 + AluSq/x SINE Alu 12 133 -180 1417 215 56 7 chr10 42478133 42478421 -97838344 + AluJo SINE Alu 1 302 -10 225 247 11 101 chr10 42478421 42478510 -97838255 + MER21B LTR ERV1 16 96 -767 2643 210 38 53 chr10 42478517 42478933 -97837832 + MER21B LTR ERV1 19 440 -423 1716 182 17 17 chr10 42478933 42479229 -97837536 - AluJb SINE Alu -3 309 14 2643 210 38 53 chr10 42479229 42479312 -97837453 + MER21B LTR ERV1 440 523 -340 1724 157 28 11 chr10 42479312 42479599 -97837166 + AluJo SINE Alu 10 301 -11 2643 210 38 53 chr10 42479599 42479831 -97836934 + MER21B LTR ERV1 523 740 -123 2694 198 36 33 chr10 42480697 42481038 -97835727 + L1MB3 LINE L1 5480 5819 -364 712 213 0 0 chr10 42481038 42481165 -97835600 + FLAM_C SINE Alu 2 128 -5 2694 198 36 33 chr10 42481165 42481524 -97835241 + L1MB3 LINE L1 5819 6182 -1 2116 130 0 3 chr10 42482273 42482566 -97834199 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 42482854 42482876 -97833889 + AT_rich Low_complexity Low_complexity 1 22 0 1051 203 88 2 chr10 42484047 42484440 -97832325 - LOR1a LTR ERV1 0 497 1 1580 189 31 10 chr10 42485113 42485404 -97831361 + AluSx SINE Alu 1 297 -15 220 314 8 16 chr10 42486581 42486705 -97830060 + GA-rich Low_complexity Low_complexity 1 123 0 204 40 0 0 chr10 42486789 42486814 -97829951 + (CAA)n Simple_repeat Simple_repeat 3 27 0 497 295 53 16 chr10 42487858 42488238 -97828527 - HSREP522 Satellite telomeric -104 400 7 1766 126 90 4 chr10 42488632 42488910 -97827855 + AluSg SINE Alu 1 302 -8 798 57 0 0 chr10 42489027 42489132 -97827633 - L1PA8 LINE L1 -304 5868 5764 2213 87 0 17 chr10 42489159 42489459 -97827306 + AluSg SINE Alu 1 295 -15 2345 97 0 0 chr10 42489652 42489950 -97826815 - AluY SINE Alu -13 298 1 1851 164 0 3 chr10 42490672 42490959 -97825806 + AluJo SINE Alu 1 286 -26 2108 107 3 27 chr10 42492912 42493234 -97823531 - AluSq SINE Alu 0 313 2 25 31 0 0 chr10 42493620 42493652 -97823113 + AT_rich Low_complexity Low_complexity 1 32 0 359 352 57 0 chr10 42493770 42493929 -97822836 - MIR SINE MIR -70 192 25 221 148 0 37 chr10 42494505 42494559 -97822206 + (TTCTCC)n Simple_repeat Simple_repeat 3 54 0 703 139 28 39 chr10 42494561 42494741 -97822024 + CT-rich Low_complexity Low_complexity 3 180 0 452 292 46 31 chr10 42495035 42495230 -97821535 + HAL1 LINE L1 780 977 -1530 26 64 0 0 chr10 42495237 42495284 -97821481 + AT_rich Low_complexity Low_complexity 1 47 0 1187 294 81 18 chr10 42495292 42496011 -97820754 + HAL1 LINE L1 1619 2382 -125 23 33 0 0 chr10 42496264 42496294 -97820471 + AT_rich Low_complexity Low_complexity 1 30 0 1488 270 108 31 chr10 42496807 42497522 -97819243 - L2 LINE L2 0 3313 2518 2725 50 6 0 chr10 42497522 42497863 -97818902 - L1PA4 LINE L1 -3 6152 5810 1488 270 108 31 chr10 42497863 42498028 -97818737 - L2 LINE L2 -795 2518 2367 2244 112 0 0 chr10 42499115 42499409 -97817356 + AluSg SINE Alu 1 294 -16 357 143 0 0 chr10 42499421 42499477 -97817288 + AluJ/FLAM SINE Alu 2 57 -245 406 239 156 44 chr10 42499674 42499854 -97816911 + L2 LINE L2 3114 3313 0 233 56 0 28 chr10 42500865 42500901 -97815864 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 1635 164 49 24 chr10 42501758 42502087 -97814678 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 42502190 42502211 -97814554 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 42502270 42502292 -97814473 + AT_rich Low_complexity Low_complexity 1 22 0 2824 173 9 7 chr10 42502386 42502931 -97813834 - L1P LINE L1 -1101 5045 4500 1102 115 6 0 chr10 42502933 42503098 -97813667 + L1PA13 LINE L1 5993 6158 -5 196 331 92 8 chr10 42505323 42505453 -97811312 + L2 LINE L2 701 841 -2473 1919 169 0 0 chr10 42505939 42506234 -97810531 + AluSx SINE Alu 1 295 -17 476 135 42 52 chr10 42506516 42506612 -97810153 - L1P LINE L1 -1552 4594 4500 1014 165 264 16 chr10 42507302 42507544 -97809221 - AluJo SINE Alu 0 302 1 1637 156 12 0 chr10 42507770 42508020 -97808745 - AluSx SINE Alu -16 296 44 1783 174 34 0 chr10 42509077 42509370 -97807395 - AluJb SINE Alu -9 303 1 817 214 35 0 chr10 42512656 42512829 -97803936 + MER5A DNA MER1_type 11 189 0 768 233 14 42 chr10 42512837 42513052 -97803713 + MER3 DNA MER1_type 1 209 0 348 207 126 45 chr10 42514036 42514147 -97802618 - MIR3 SINE MIR -6 202 83 2109 128 0 26 chr10 42515288 42515593 -97801172 - AluSq SINE Alu -16 297 1 279 140 0 0 chr10 42516663 42516713 -97800052 + (TG)n Simple_repeat Simple_repeat 1 50 0 230 296 18 45 chr10 42518004 42518170 -97798595 - MIR SINE MIR -61 147 31 2100 146 123 5 chr10 42518187 42518570 -97798195 + MSTA LTR MaLR 1 428 0 2325 92 0 20 chr10 42518761 42519065 -97797700 - AluSc SINE Alu -11 298 1 228 198 66 55 chr10 42519278 42519369 -97797396 - L2 LINE L2 -99 3214 3123 1700 181 3 17 chr10 42519399 42519692 -97797073 + AluSx SINE Alu 3 291 -21 26 30 0 0 chr10 42520325 42520358 -97796407 + AT_rich Low_complexity Low_complexity 1 33 0 985 290 130 33 chr10 42521630 42522521 -97794244 - L2 LINE L2 -12 3301 2334 1116 150 0 0 chr10 42522552 42522719 -97794046 - L1PB3 LINE L1 -24 6130 5964 302 261 9 0 chr10 42522760 42522871 -97793894 + (TA)n Simple_repeat Simple_repeat 1 112 0 3785 23 9 0 chr10 42523102 42523533 -97793232 - L1P LINE L1 -1709 4437 4002 2098 45 0 19 chr10 42523533 42523790 -97792975 + L1PA5 LINE L1 5895 6153 -1 196 162 0 27 chr10 42523800 42523837 -97792928 - MIR SINE MIR -218 44 9 589 125 86 78 chr10 42524952 42525080 -97791685 - FLAM_C SINE Alu -1 132 4 224 250 0 0 chr10 42525242 42525290 -97791475 + MIR3 SINE MIR 112 159 -49 2321 115 3 0 chr10 42525815 42526127 -97790638 - AluSp SINE Alu 0 313 1 1809 145 0 28 chr10 42526822 42527133 -97789632 - AluJb SINE Alu 0 303 1 486 277 53 19 chr10 42527689 42527888 -97788877 - MIR SINE MIR -52 210 8 1560 48 0 0 chr10 42529206 42529393 -97787372 + L1PA6 LINE L1 5968 6154 0 201 94 0 0 chr10 42529422 42529454 -97787311 + (CA)n Simple_repeat Simple_repeat 2 33 0 2130 105 7 0 chr10 42529785 42530080 -97786685 + AluSg SINE Alu 1 297 -13 2241 92 3 7 chr10 42530145 42530438 -97786327 + AluSc SINE Alu 1 292 -17 850 167 13 0 chr10 42530451 42530601 -97786164 - L1MB2 LINE L1 -58 6113 5962 25 53 0 18 chr10 42530883 42530902 -97785863 + AT_rich Low_complexity Low_complexity 1 19 -37 1902 145 36 46 chr10 42530902 42531295 -97785470 + L1MA8 LINE L1 5897 6285 -6 25 53 0 18 chr10 42531295 42531332 -97785433 + AT_rich Low_complexity Low_complexity 19 56 0 1851 178 0 3 chr10 42531336 42531639 -97785126 + AluJb SINE Alu 5 306 -6 29 0 0 0 chr10 42532256 42532285 -97784480 + AT_rich Low_complexity Low_complexity 1 29 0 1352 159 52 17 chr10 42532737 42532970 -97783795 + AluJo SINE Alu 57 297 -15 201 235 0 0 chr10 42535088 42535139 -97781626 + L2 LINE L2 3190 3240 -73 1958 146 3 10 chr10 42535579 42535881 -97780884 + AluJb SINE Alu 1 300 -12 228 327 9 18 chr10 42535894 42536004 -97780761 + MER5B DNA MER1_type 1 109 -69 323 326 90 21 chr10 42536602 42536835 -97779930 - MIR SINE MIR 0 262 14 541 265 175 26 chr10 42537733 42538208 -97778557 - L2 LINE L2 0 3313 2755 5032 39 11 15 chr10 42538256 42539295 -97777470 - MER11A LTR ERVK 0 1266 1 242 283 26 44 chr10 42539860 42539973 -97776792 + MLT2E LTR ERVL 505 615 -13 657 257 34 10 chr10 42539982 42540188 -97776577 - L1MC5 LINE L1 -735 7226 7016 2277 114 0 3 chr10 42540284 42540583 -97776182 - AluY SINE Alu -13 298 1 260 229 136 7 chr10 42540640 42540780 -97775985 - L1ME LINE L1 -5160 910 753 2841 221 33 2 chr10 42540781 42541352 -97775413 + Tigger7 DNA MER2_type 2 590 -143 390 225 12 0 chr10 42541346 42541426 -97775339 + Tigger7 DNA MER2_type 2407 2487 0 * 285 29 0 0 chr10 42541543 42541577 -97775188 + (CAT)n Simple_repeat Simple_repeat 3 36 0 1480 210 3 32 chr10 42541577 42541887 -97774878 - AluJo SINE Alu -11 301 1 871 279 34 20 chr10 42541894 42542188 -97774577 - L1MC4 LINE L1 -1029 7013 6716 29 0 0 0 chr10 42542208 42542237 -97774528 + AT_rich Low_complexity Low_complexity 1 29 0 2160 111 0 0 chr10 42542354 42542634 -97774131 - AluSg1 SINE Alu -29 280 1 1479 148 6 102 chr10 42542634 42542966 -97773799 - AluSx SINE Alu -12 300 1 696 164 9 0 chr10 42542966 42543082 -97773683 + Tigger1 DNA MER2_type 2302 2418 0 1293 215 0 31 chr10 42543148 42543318 -97773447 - AluJo SINE Alu -6 306 132 261 0 0 0 chr10 42543318 42543347 -97773418 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2393 57 0 0 chr10 42543347 42543629 -97773136 - AluY SINE Alu -29 282 1 1293 215 0 31 chr10 42543629 42543745 -97773020 - AluJo SINE Alu -178 134 28 1060 246 18 33 chr10 42543750 42544080 -97772685 - L1MC4 LINE L1 -476 7566 7242 446 76 0 0 chr10 42544094 42544160 -97772605 - MER41A LTR ERV1 -88 466 401 970 154 0 0 chr10 42544340 42544483 -97772282 - FLAM_C SINE Alu 0 143 1 355 43 0 0 chr10 42545029 42545076 -97771689 + AluY SINE Alu 254 300 0 2056 112 0 24 chr10 42545086 42545373 -97771392 + AluSg1 SINE Alu 1 280 -29 31 26 0 0 chr10 42545490 42545528 -97771237 + AT_rich Low_complexity Low_complexity 1 38 0 280 313 9 0 chr10 42545811 42545926 -97770839 - L1ME2 LINE L1 0 6164 6049 292 267 100 0 chr10 42546763 42546853 -97769912 + MIR3 SINE MIR 91 189 -19 2326 95 3 0 chr10 42547136 42547431 -97769334 - AluSq SINE Alu -16 297 2 2331 97 0 3 chr10 42549261 42549572 -97767193 - AluSq SINE Alu -3 310 1 1224 119 108 101 chr10 42549809 42550095 -97766670 - AluJo SINE Alu -24 288 1 225 282 0 0 chr10 42553212 42553290 -97763475 + (CA)n Simple_repeat Simple_repeat 2 79 0 603 239 0 8 chr10 42554152 42554286 -97762479 - AluJo SINE Alu -178 134 2 761 229 23 6 chr10 42556085 42556260 -97760505 - MER45A DNA AcHobo 0 178 1 2014 154 41 11 chr10 42556319 42556683 -97760082 + THE1C LTR MaLR 1 375 0 1270 91 11 6 chr10 42556778 42556953 -97759812 - PABL_B LTR ERV1 -206 461 286 342 286 38 30 chr10 42558435 42558568 -97758197 - MIR SINE MIR -55 153 20 417 213 23 89 chr10 42558619 42558888 -97757877 - L1M3 LINE L1 -690 5493 689 * 6614 139 23 1 chr10 42558886 42560130 -97756635 - L1MA3 LINE L1 0 6305 5033 2707 179 77 9 chr10 42560130 42561005 -97755760 + L1 LINE L1 3417 4108 -2038 1507 118 0 48 chr10 42560773 42561001 -97755764 - AluY SINE Alu -94 217 1 845 113 8 0 chr10 42561001 42561123 -97755642 - MSTA-int LTR MaLR -1525 126 1 2242 116 129 11 chr10 42561123 42561502 -97755263 - MSTA LTR MaLR 0 428 5 3215 243 49 22 chr10 42561506 42562226 -97754539 + L1MC2 LINE L1 4301 5000 -1146 2132 43 0 22 chr10 42562226 42562503 -97754262 + L1PA6 LINE L1 5883 6153 -1 3215 243 49 22 chr10 42562503 42562571 -97754194 + L1MC2 LINE L1 5000 5065 -1081 1753 177 3 3 chr10 42562571 42562865 -97753900 + AluSx SINE Alu 1 294 -18 3215 243 49 22 chr10 42562865 42563081 -97753684 + L1MC2 LINE L1 5065 5333 -813 2201 104 37 0 chr10 42563081 42563406 -97753359 + AluSg SINE Alu 1 336 0 922 8 23 16 chr10 42563406 42563535 -97753230 + (GAGAA)n Simple_repeat Simple_repeat 4 133 0 554 169 127 8 chr10 42563535 42563653 -97753112 + AluJb SINE Alu 170 301 -11 2258 194 47 6 chr10 42563653 42564162 -97752603 + L1MC2 LINE L1 5814 6343 -1 2080 189 116 34 chr10 42564164 42564761 -97752004 + L1MDa LINE L1 1353 1998 -4542 1852 156 6 16 chr10 42564764 42565078 -97751687 + AluJo SINE Alu 1 311 -1 2328 73 0 3 chr10 42565440 42565729 -97751036 - AluSc SINE Alu 0 309 22 2850 81 128 0 chr10 42565941 42566372 -97750393 + LTR19A LTR ERV1 1 486 0 2328 191 10 17 chr10 42567613 42567968 -97748797 - MER70B LTR ERVL -177 401 48 2140 121 3 7 chr10 42567968 42568273 -97748492 + AluSx SINE Alu 1 304 -8 2328 191 10 17 chr10 42568273 42568321 -97748444 - MER70B LTR ERVL -530 48 1 7622 198 106 22 chr10 42568512 42570131 -97746634 + MER52A LTR ERV1 1 1755 0 635 220 58 0 chr10 42570135 42570308 -97746457 + MER5A DNA MER1_type 4 186 -3 246 65 0 0 chr10 42570322 42570353 -97746412 + MER70B LTR ERVL 290 320 -258 2362 120 11 22 chr10 42570985 42571352 -97745413 + THE1B LTR MaLR 1 363 -1 981 274 136 7 chr10 42572169 42572632 -97744133 + L2 LINE L2 1311 1833 -1481 454 272 40 17 chr10 42572653 42572826 -97743939 + L2 LINE L2 2046 2222 -1092 2565 124 70 5 chr10 42572833 42573235 -97743530 + MSTA LTR MaLR 1 428 0 1233 232 288 17 chr10 42573235 42573833 -97742932 + LTR41 LTR ERVL 8 767 -6 1493 249 44 24 chr10 42573837 42574006 -97742759 + L2 LINE L2 2210 2374 -940 2738 14 0 0 chr10 42574006 42574302 -97742463 - AluYa5 SINE Alu -15 296 1 1493 249 44 24 chr10 42574302 42574627 -97742138 + L2 LINE L2 2374 2714 -600 1411 243 119 25 chr10 42574786 42575350 -97741415 - L2 LINE L2 -2089 1225 609 1600 129 10 61 chr10 42575832 42576143 -97740622 - AluJo SINE Alu -17 295 1 227 341 33 0 chr10 42577019 42577110 -97739655 - MIR SINE MIR -92 116 23 247 222 42 14 chr10 42577277 42577349 -97739416 + L2 LINE L2 3240 3313 0 557 241 145 0 chr10 42577757 42577923 -97738842 - MER3 DNA MER1_type 0 209 20 477 284 151 14 chr10 42578750 42578968 -97737797 - MIR SINE MIR -13 249 2 1617 147 42 62 chr10 42580244 42580550 -97736215 - AluJb SINE Alu -12 300 1 235 264 47 31 chr10 42581415 42581544 -97735221 - MIR SINE MIR -36 226 96 1725 134 67 10 chr10 42582178 42582492 -97734273 - L1MA4 LINE L1 -1 6299 5968 426 252 124 52 chr10 42582653 42582849 -97733916 - L1MC4a LINE L1 -161 5960 5750 1083 197 45 0 chr10 42583891 42584089 -97732676 - MER58A DNA MER1_type -16 208 2 1764 165 14 3 chr10 42584394 42584685 -97732080 + AluSx SINE Alu 1 294 -18 24 32 0 0 chr10 42585404 42585435 -97731330 + AT_rich Low_complexity Low_complexity 1 31 0 1989 146 10 7 chr10 42587739 42588047 -97728718 - AluSx SINE Alu -3 309 1 1234 246 78 8 chr10 42588162 42588557 -97728208 - L1MC4 LINE L1 -799 7243 6821 1686 173 17 13 chr10 42591528 42591828 -97724937 - AluJb SINE Alu -6 306 6 335 230 103 52 chr10 42592289 42592463 -97724302 - L1MC5 LINE L1 -436 7525 7343 723 178 86 0 chr10 42592473 42592636 -97724129 + MER3 DNA MER1_type 10 186 -23 1031 242 145 70 chr10 42592653 42592952 -97723813 - L1MC5 LINE L1 -624 7337 7062 2207 110 0 3 chr10 42592952 42593253 -97723512 - AluY SINE Alu -11 300 1 1031 242 145 70 chr10 42593253 42593794 -97722971 - L1MC5 LINE L1 -899 7062 6414 1387 163 150 5 chr10 42593849 42594182 -97722583 - L1MC4a LINE L1 -606 5578 5215 21 71 0 0 chr10 42594918 42594960 -97721805 + AT_rich Low_complexity Low_complexity 1 42 0 75 39 0 0 chr10 42595146 42595249 -97721516 + AT_rich Low_complexity Low_complexity 1 103 0 661 224 116 0 chr10 42595447 42595594 -97721171 - FRAM SINE Alu -2 164 1 1326 191 5 5 chr10 42595644 42595864 -97720901 - AluJo SINE Alu -92 220 1 24 0 0 0 chr10 42595884 42595908 -97720857 + AT_rich Low_complexity Low_complexity 1 24 0 3257 219 72 27 chr10 42596177 42597156 -97719609 - L1ME1 LINE L1 -5 6421 5335 2127 101 28 0 chr10 42597156 42597443 -97719322 - AluSx SINE Alu -17 295 1 3257 219 72 27 chr10 42597443 42598111 -97718654 - L1ME1 LINE L1 -1091 5335 4699 1630 137 0 0 chr10 42598340 42598566 -97718199 - AluSx SINE Alu -25 287 62 442 203 73 8 chr10 42598823 42598946 -97717819 - L1ME1 LINE L1 -1948 4458 4328 2404 95 0 3 chr10 42598982 42599288 -97717477 + AluSg SINE Alu 1 305 -5 2341 177 68 74 chr10 42599327 42599564 -97717201 - L1MD2 LINE L1 0 6359 6122 191 88 29 0 chr10 42599564 42599598 -97717167 + (TG)n Simple_repeat Simple_repeat 2 36 0 2341 177 68 74 chr10 42599598 42599994 -97716771 - L1MD2 LINE L1 -237 6122 5730 1142 176 49 5 chr10 42599994 42600169 -97716596 - AluJo SINE Alu 0 305 117 189 74 0 0 chr10 42600169 42600196 -97716569 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1142 176 49 5 chr10 42600196 42600249 -97716516 - AluJo SINE Alu -188 117 68 1125 190 74 16 chr10 42600249 42600491 -97716274 - L1MD2 LINE L1 -622 5737 5482 1545 166 7 58 chr10 42600632 42600940 -97715825 - AluJo SINE Alu -20 292 1 370 111 0 0 chr10 42600948 42601002 -97715763 - L1ME1 LINE L1 -2303 4103 4050 550 173 19 19 chr10 42601062 42601166 -97715599 - U13 snRNA snRNA 0 104 1 2771 223 65 69 chr10 42601192 42601868 -97714897 - L1ME1 LINE L1 -2367 4039 3362 2134 123 3 3 chr10 42601868 42602178 -97714587 - AluSp SINE Alu -3 310 1 2771 223 65 69 chr10 42602178 42602351 -97714414 - L1ME1 LINE L1 -3044 3362 3190 2888 10 0 0 chr10 42602351 42602659 -97714106 - AluYa5 SINE Alu -3 308 1 2771 223 65 69 chr10 42602659 42603007 -97713758 - L1ME1 LINE L1 -3216 3190 2844 1457 209 22 0 chr10 42603007 42603275 -97713490 - AluJo SINE Alu -38 274 1 2771 223 65 69 chr10 42603275 42603317 -97713448 - L1ME1 LINE L1 -3562 2844 2803 1240 241 57 67 chr10 42603370 42603864 -97712901 - LTR53 LTR ERVL -11 508 20 2345 215 150 77 chr10 42603877 42605410 -97711355 - L1ME1 LINE L1 -3753 2653 1017 1286 175 24 12 chr10 42605411 42605662 -97711103 - L1ME1 LINE L1 -5502 907 654 873 241 66 8 chr10 42605674 42605915 -97710850 - L1ME1 LINE L1 -6072 337 83 281 252 107 29 chr10 42606056 42606159 -97710606 + MIR SINE MIR 145 255 -7 684 189 148 18 chr10 42606395 42606564 -97710201 - AluJb SINE Alu -8 304 114 2200 102 3 0 chr10 42606857 42607160 -97709605 + AluSg SINE Alu 1 304 -6 360 218 58 11 chr10 42609155 42609242 -97707523 - L2 LINE L2 -499 2815 2725 474 324 95 108 chr10 42609262 42610299 -97706466 - L2 LINE L2 -709 2605 1519 717 230 29 0 chr10 42610315 42610489 -97706276 + MER3 DNA MER1_type 5 183 -26 265 308 60 15 chr10 42610566 42610699 -97706066 - L2 LINE L2 -1898 1416 1278 2245 105 0 0 chr10 42610822 42611128 -97705637 - AluSx SINE Alu -6 306 1 245 338 0 12 chr10 42612257 42612337 -97704428 - L2 LINE L2 0 3313 3235 2260 114 0 0 chr10 42612578 42612886 -97703879 - AluSx SINE Alu -4 308 1 445 172 75 0 chr10 42613832 42613925 -97702840 - L1M2a LINE L1 -7068 100 1 764 252 190 26 chr10 42614048 42614437 -97702328 - L1ME3A LINE L1 -1 6169 5717 272 261 2 25 chr10 42614606 42614686 -97702079 - L1ME3A LINE L1 -615 5549 5469 354 310 65 7 chr10 42614717 42614872 -97701893 - L1MEd LINE L1 -5953 166 3 1486 64 5 0 chr10 42615194 42615382 -97701383 + AluY SINE Alu 106 294 -17 1940 113 3 27 chr10 42615590 42615907 -97700858 + AluSx SINE Alu 1 310 0 298 132 57 0 chr10 42617640 42617693 -97699072 - Tigger3(Golem) DNA MER2_type -71 2958 2903 435 236 81 95 chr10 42618038 42618186 -97698579 - L1MD2 LINE L1 -79 6280 6135 1975 126 3 7 chr10 42618201 42618495 -97698270 + AluJb SINE Alu 1 293 -19 457 237 31 0 chr10 42618509 42618606 -97698159 - U6 snRNA snRNA -4 103 4 1834 173 77 0 chr10 42619420 42619743 -97697022 - MER7A DNA MER2_type 0 346 1 273 172 0 86 chr10 42619897 42619955 -97696810 + L2 LINE L2 3187 3239 -74 3451 177 113 35 chr10 42620945 42621867 -97694898 - L1MB3 LINE L1 0 6183 5196 25 31 0 0 chr10 42621885 42621917 -97694848 + GC_rich Low_complexity Low_complexity 1 32 0 717 213 43 7 chr10 42622077 42622218 -97694547 + AluSg/x SINE Alu 134 279 -33 772 145 0 0 chr10 42622278 42622402 -97694363 + Tigger2 DNA MER2_type 873 996 -1722 1410 199 49 66 chr10 42622410 42622437 -97694328 - MER49 LTR ERV1 -10 913 887 1502 158 8 15 chr10 42622437 42622696 -97694069 - AluJb SINE Alu -55 257 1 1410 199 49 66 chr10 42622696 42622707 -97694058 - MER49 LTR ERV1 -36 887 877 856 35 26 0 chr10 42622707 42622822 -97693943 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 1809 132 0 18 chr10 42622826 42623106 -97693659 - AluSx SINE Alu -32 280 6 1410 199 49 66 chr10 42623106 42623468 -97693297 - MER49 LTR ERV1 -49 874 514 * 5084 122 82 18 chr10 42623443 42624233 -97692532 + Tigger2 DNA MER2_type 1814 2664 -54 1882 130 0 13 chr10 42624233 42624532 -97692233 - AluSg SINE Alu -15 295 1 5084 122 82 18 chr10 42624532 42624591 -97692174 + Tigger2 DNA MER2_type 2664 2718 0 374 272 125 15 chr10 42624595 42624731 -97692034 - MIR SINE MIR -70 192 42 671 151 118 0 chr10 42624991 42625110 -97691655 + FLAM_C SINE Alu 1 133 0 241 284 136 58 chr10 42625372 42625843 -97690922 + L2 LINE L2 2554 3064 -208 515 141 148 16 chr10 42625846 42625974 -97690791 + MER3 DNA MER1_type 41 185 -24 919 188 56 39 chr10 42625981 42626106 -97690659 + MER3 DNA MER1_type 2268 2401 -223 2059 101 0 7 chr10 42626106 42626418 -97690347 + AluSq SINE Alu 1 310 0 919 188 56 39 chr10 42626418 42626525 -97690240 + MER3 DNA MER1_type 2401 2505 -119 308 65 0 43 chr10 42626523 42626569 -97690196 - AluSx SINE Alu -10 292 249 * 883 235 67 17 chr10 42626679 42627398 -97689367 - L1MD1 LINE L1 -329 5913 5032 12708 164 53 19 chr10 42627423 42629445 -97687320 - ERVL-B1 LTR ERVL -357 5407 3293 9122 38 7 179 chr10 42629445 42631129 -97685636 + SVA Other Other 1 1386 0 12708 164 53 19 chr10 42631129 42631435 -97685330 - ERVL-B1 LTR ERVL -2471 3293 2999 1890 244 81 6 chr10 42631418 42631914 -97684851 - ERVL-B1 LTR ERVL -5230 534 2 * 1961 195 95 41 chr10 42631915 42632408 -97684357 - MLT2B1 LTR ERVL 0 520 1 2773 142 60 22 chr10 42632413 42632455 -97684310 + L1MA5 LINE L1 5729 5768 -532 198 0 0 0 chr10 42632455 42632477 -97684288 + (TG)n Simple_repeat Simple_repeat 2 23 0 2773 142 60 22 chr10 42632477 42632985 -97683780 + L1MA5 LINE L1 5768 6300 0 180 0 0 0 chr10 42633522 42633542 -97683223 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 8538 259 66 29 chr10 42633712 42634515 -97682250 - L1MD2 LINE L1 0 6753 5981 1725 143 8 0 chr10 42634515 42634781 -97681984 - AluSx SINE Alu -44 268 1 8538 259 66 29 chr10 42634781 42637237 -97679528 - L1MD2 LINE L1 -772 5981 3317 1666 160 28 14 chr10 42637237 42637525 -97679240 - AluJb SINE Alu -20 292 1 8538 259 66 29 chr10 42637525 42638302 -97678463 - L1MD2 LINE L1 -3436 3317 2570 956 275 133 42 chr10 42638377 42638882 -97677883 - MER77 LTR ERV1 -1 604 54 3221 241 95 18 chr10 42638913 42640147 -97676618 - L1MD2 LINE L1 -4012 2528 1107 1637 193 3 0 chr10 42640147 42640458 -97676307 - AluJo SINE Alu 0 312 1 3221 241 95 18 chr10 42640458 42640731 -97676034 - L1MD2 LINE L1 -5433 1107 857 804 268 61 23 chr10 42640905 42641166 -97675599 - L1MD2 LINE L1 -6208 332 62 228 278 56 32 chr10 42641197 42641323 -97675442 - L1P4 LINE L1 -558 5605 5477 366 340 92 54 chr10 42642313 42642607 -97674158 + HAL1 LINE L1 1251 1555 -952 965 90 8 0 chr10 42642957 42643091 -97673674 + AluSq/x SINE Alu 1 135 -178 1988 115 0 3 chr10 42643091 42643386 -97673379 + AluSx SINE Alu 1 294 -18 315 350 49 28 chr10 42643779 42643843 -97672922 + MIR SINE MIR 4 65 -197 1721 187 36 3 chr10 42643843 42644175 -97672590 - MER2 DNA MER2_type -1 343 1 315 350 49 28 chr10 42644175 42644253 -97672512 + MIR SINE MIR 65 149 -113 502 286 70 50 chr10 42644306 42644884 -97671881 - L1ME LINE L1 -503 5661 5074 1820 80 52 12 chr10 42645116 42645367 -97671398 + L1PA8 LINE L1 5906 6166 -6 22 0 0 0 chr10 42645367 42645389 -97671376 + AT_rich Low_complexity Low_complexity 1 22 0 349 340 95 53 chr10 42645815 42646194 -97670571 - L1ME LINE L1 -2683 3463 3069 246 331 8 0 chr10 42646214 42646335 -97670430 - L1ME LINE L1 -3135 3011 2890 225 333 18 0 chr10 42646379 42646490 -97670275 - L1ME LINE L1 -3128 3018 2906 1866 155 0 3 chr10 42646516 42646813 -97669952 - AluSx SINE Alu -16 296 1 189 0 26 77 chr10 42647037 42647076 -97669689 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 888 209 6 0 chr10 42647674 42647846 -97668919 + L1MB3 LINE L1 5659 5831 -352 885 96 16 0 chr10 42647846 42647971 -97668794 - BC200 scRNA scRNA -60 140 14 1433 193 55 40 chr10 42647974 42648353 -97668412 + L1MB3 LINE L1 5798 6182 -1 289 254 123 9 chr10 42648359 42648473 -97668292 + MIR SINE MIR 20 146 -116 230 0 0 32 chr10 42649728 42649759 -97667006 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 1111 237 78 3 chr10 42649801 42650134 -97666631 - MER47A DNA MER2_type 0 366 9 215 261 159 0 chr10 42650155 42650224 -97666541 + MIR SINE MIR 64 143 -119 213 341 0 0 chr10 42650266 42650348 -97666417 + (TATG)n Simple_repeat Simple_repeat 3 84 0 218 190 0 17 chr10 42650352 42650410 -97666355 + (TG)n Simple_repeat Simple_repeat 2 58 0 2152 83 3 42 chr10 42651626 42651939 -97664826 - AluSg SINE Alu -9 301 1 426 306 0 0 chr10 42652239 42652409 -97664356 + (CA)n Simple_repeat Simple_repeat 1 170 0 276 185 0 0 chr10 42652430 42652484 -97664281 + (CA)n Simple_repeat Simple_repeat 1 54 0 182 318 0 0 chr10 42652663 42652726 -97664039 - L2 LINE L2 -6 3266 3204 365 237 140 9 chr10 42653473 42653587 -97663178 - MIR SINE MIR -74 188 60 207 100 0 0 chr10 42658950 42658980 -97657785 + (TG)n Simple_repeat Simple_repeat 2 31 0 1008 237 55 29 chr10 42659593 42660044 -97656721 + MLT2B1 LTR ERVL 1 513 -7 219 326 0 0 chr10 42663028 42663114 -97653651 + (TG)n Simple_repeat Simple_repeat 1 86 0 416 304 75 68 chr10 42663812 42664226 -97652539 + L1MEd LINE L1 853 1252 -4867 1863 127 31 130 chr10 42664481 42664973 -97651792 - Tigger2 DNA MER2_type 0 2718 1 2912 184 26 36 chr10 42665346 42665955 -97650810 - LTR26 LTR ERV1 0 603 1 216 0 0 0 chr10 42666011 42666035 -97650730 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 604 300 104 39 chr10 42666329 42666767 -97649998 + L1MEd LINE L1 2627 3089 -3040 744 114 24 0 chr10 42667833 42667956 -97648809 + L1MA7 LINE L1 6166 6291 0 541 323 81 19 chr10 42668835 42669157 -97647608 - L1MDa LINE L1 -2634 3906 3565 6702 94 12 13 chr10 42669160 42669254 -97647511 - L1MA2 LINE L1 0 6304 6211 2101 114 0 3 chr10 42669254 42669551 -97647214 + AluSg SINE Alu 1 296 -14 6702 94 12 13 chr10 42669551 42670431 -97646334 - L1MA2 LINE L1 -93 6211 5331 * 10955 163 14 8 chr10 42670428 42672163 -97644602 - L1M1 LINE L1 -5807 1758 14 359 227 103 67 chr10 42672169 42672363 -97644402 - L1MDa LINE L1 -2998 3542 3342 1480 285 42 10 chr10 42672389 42672908 -97643857 - L1ME3A LINE L1 -260 5910 5375 2517 111 40 24 chr10 42672919 42673296 -97643469 + MSTC LTR MaLR 1 383 -45 926 191 26 0 chr10 42673314 42673508 -97643257 - L1MDa LINE L1 -3530 3010 2812 * 1991 216 118 14 chr10 42673505 42673792 -97642973 - L1MDa LINE L1 -4000 2540 2284 1948 118 51 3 chr10 42673792 42674088 -97642677 - AluSx SINE Alu -2 310 1 1991 216 118 14 chr10 42674088 42674453 -97642312 - L1MDa LINE L1 -4256 2284 1820 2270 20 0 0 chr10 42674537 42674791 -97641974 + L1PA3 LINE L1 5897 6150 -5 186 167 0 0 chr10 42674795 42674831 -97641934 + A-rich Low_complexity Low_complexity 1 36 0 384 198 144 18 chr10 42674831 42674942 -97641823 - L1MDa LINE L1 -4736 1804 1680 317 175 0 0 chr10 42674948 42675005 -97641760 + MLT2B1 LTR ERVL 464 520 0 1484 262 171 8 chr10 42675011 42675618 -97641147 + L1MC4a LINE L1 6784 7489 -319 391 240 116 0 chr10 42675620 42675749 -97641016 + L1MC4 LINE L1 7759 7902 -140 825 256 59 21 chr10 42675961 42676199 -97640566 + MIR SINE MIR 15 261 -1 2664 79 35 0 chr10 42676545 42676888 -97639877 + THE1A LTR MaLR 1 355 0 291 156 0 0 chr10 42677341 42677386 -97639379 - MLT1H LTR MaLR -1 548 504 467 276 241 25 chr10 42677437 42677752 -97639013 - MLT1H LTR MaLR -42 507 125 338 344 32 26 chr10 42678071 42678414 -97638351 + L1ME3A LINE L1 4942 5286 -860 744 259 41 5 chr10 42678415 42678612 -97638153 + MER63A DNA MER1_type 1 204 -6 1165 289 51 48 chr10 42678613 42678646 -97638119 + L1ME3A LINE L1 5285 5316 -854 2003 110 21 0 chr10 42678646 42678936 -97637829 + AluSp SINE Alu 1 296 -17 1165 289 51 48 chr10 42678936 42678981 -97637784 + L1ME3A LINE L1 5316 5359 -811 2300 128 82 15 chr10 42678981 42679386 -97637379 - MSTB1 LTR MaLR 0 432 1 1165 289 51 48 chr10 42679386 42679953 -97636812 + L1ME3A LINE L1 5359 5933 -237 369 0 0 0 chr10 42680581 42680622 -97636143 + (CA)n Simple_repeat Simple_repeat 2 42 0 1144 155 14 10 chr10 42682387 42682594 -97634171 - AluJb SINE Alu -20 292 85 8271 49 9 118 chr10 42682620 42683942 -97632823 + SVA Other Other 209 1386 0 926 284 126 27 chr10 42683945 42684470 -97632295 + L1MC4a LINE L1 5324 5900 -1908 231 148 148 178 chr10 42684733 42684834 -97631931 - MLT2B1 LTR ERVL -14 506 409 802 248 165 18 chr10 42684859 42685260 -97631505 + MLT1H1 LTR MaLR 96 545 -10 899 142 131 6 chr10 42685620 42685796 -97630969 + L1P5 LINE L1 3 200 -6663 6639 116 162 9 chr10 42685796 42686329 -97630436 + L1P5 LINE L1 634 1084 -5779 2030 109 0 10 chr10 42686329 42686623 -97630142 - AluSq SINE Alu -22 291 1 6639 116 162 9 chr10 42686623 42687208 -97629557 + L1P5 LINE L1 1084 1914 -4949 1868 91 60 0 chr10 42687216 42687501 -97629264 - L1PBa LINE L1 -4434 2429 2128 * 13281 189 16 18 chr10 42687500 42690531 -97626234 + L1P5 LINE L1 3032 6043 -824 189 0 0 0 chr10 42690531 42690552 -97626213 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 13281 189 16 18 chr10 42690552 42690926 -97625839 + L1P5 LINE L1 6043 6416 -451 470 299 24 0 chr10 42691464 42691591 -97625174 + L2 LINE L2 3184 3313 0 * 786 304 121 56 chr10 42691575 42692067 -97624698 - L2 LINE L2 -7 3306 2707 2207 122 3 26 chr10 42692067 42692410 -97624355 + MER1B DNA MER1_type 3 337 0 786 304 121 56 chr10 42692410 42692728 -97624037 - L2 LINE L2 -606 2707 2411 556 239 73 76 chr10 42692866 42693167 -97623598 - L1MC4 LINE L1 -1 8041 7742 234 0 0 0 chr10 42693187 42693213 -97623552 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4133 35 2 0 chr10 42693213 42693693 -97623072 - L1PA3 LINE L1 -13 6142 5662 2989 61 10 15 chr10 42693693 42694087 -97622678 + L1PB1 LINE L1 5716 6107 -44 24 0 0 0 chr10 42694088 42694112 -97622653 + AT_rich Low_complexity Low_complexity 1 24 0 769 265 20 0 chr10 42694588 42694788 -97621977 + MER58A DNA MER1_type 18 221 -3 1005 155 0 0 chr10 42694937 42695098 -97621667 + AluSg/x SINE Alu 134 294 -18 737 315 113 38 chr10 42695099 42695756 -97621009 + L1ME4a LINE L1 5255 5964 -157 203 138 0 0 chr10 42695756 42695785 -97620980 + (TG)n Simple_repeat Simple_repeat 2 30 0 633 270 139 37 chr10 42695850 42696309 -97620456 - MLT1J LTR MaLR -2 509 4 334 264 111 69 chr10 42696336 42696552 -97620213 + HAL1 LINE L1 1428 1652 -855 800 130 0 0 chr10 42696564 42696679 -97620086 + AluJb SINE Alu 1 115 -197 210 91 0 0 chr10 42696685 42696718 -97620047 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1427 224 23 1 chr10 42696921 42697243 -97619522 + L1MDa LINE L1 4 456 -6087 1883 180 50 50 chr10 42697243 42697748 -97619017 - MLT1D LTR MaLR 0 505 1 1899 232 26 113 chr10 42697750 42698449 -97618316 - MLT1D-int LTR MaLR -2 1369 732 * 3403 205 103 63 chr10 42698447 42699138 -97617627 + L1MDa LINE L1 458 1120 -5420 2107 102 3 0 chr10 42699138 42699432 -97617333 + AluSq SINE Alu 1 295 -18 3403 205 103 63 chr10 42699432 42700027 -97616738 + L1MDa LINE L1 1120 1820 -4720 21 0 0 0 chr10 42700083 42700104 -97616661 + AT_rich Low_complexity Low_complexity 1 21 0 1597 165 15 11 chr10 42700120 42700392 -97616373 - MLT2B1 LTR ERVL -246 274 2 473 179 56 78 chr10 42700406 42700597 -97616168 - L1MC4 LINE L1 -1073 6820 6546 1491 196 14 7 chr10 42700598 42700884 -97615881 + LOR1b LTR ERV1 66 353 -108 388 81 203 14 chr10 42700872 42700946 -97615819 + LOR1a LTR ERV1 410 497 0 * 391 287 111 62 chr10 42700946 42701642 -97615123 - L1MCa LINE L1 -2248 4178 3449 1426 169 73 11 chr10 42701905 42702178 -97614587 + AluJo SINE Alu 3 292 -20 2288 93 0 0 chr10 42702206 42702508 -97614257 + AluSc SINE Alu 1 302 -7 304 296 74 31 chr10 42702520 42702844 -97613921 - L1MCa LINE L1 -3335 3091 2754 533 170 0 10 chr10 42703020 42703120 -97613645 + L1MB1 LINE L1 6007 6105 -63 394 143 0 0 chr10 42703120 42703183 -97613582 + AluJ/FRAM SINE Alu 226 288 -14 450 120 0 0 chr10 42703200 42703275 -97613490 + L1MB1 LINE L1 6093 6167 -1 890 232 5 0 chr10 42703313 42703520 -97613245 + HsTC2 DNA Tc2 93 300 -1598 * 2502 213 92 35 chr10 42703515 42703941 -97612824 + HsTC2 DNA Tc2 561 961 -937 1884 135 17 0 chr10 42703941 42704238 -97612527 + AluSx SINE Alu 1 302 -10 2502 213 92 35 chr10 42704238 42704682 -97612083 + HsTC2 DNA Tc2 961 1652 -246 1654 138 47 0 chr10 42704743 42704997 -97611768 - AluSg SINE Alu -24 286 21 472 258 54 84 chr10 42705002 42705321 -97611444 - L1MCa LINE L1 -3949 2477 2246 510 311 113 22 chr10 42705644 42706149 -97610616 - HAL1 LINE L1 -849 1658 1108 620 246 95 3 chr10 42706192 42706495 -97610270 - L1MC/D LINE L1 -734 5436 5335 440 184 62 9 chr10 42706495 42706613 -97610152 - L1 LINE L1 -753 5393 5264 1322 326 85 60 chr10 42706657 42707419 -97609346 - L1 LINE L1 -1833 4313 3498 2054 178 88 9 chr10 42707419 42707852 -97608913 - MLT1C LTR MaLR 0 467 1 1322 326 85 60 chr10 42707852 42708272 -97608493 - L1 LINE L1 -2648 3498 3090 510 267 32 97 chr10 42708298 42708647 -97608118 - L1ME1 LINE L1 -16 6150 5828 2480 75 16 0 chr10 42709188 42709494 -97607271 - AluY SINE Alu 0 311 1 698 204 247 55 chr10 42709753 42710097 -97606668 + LTR16A1 LTR ERVL 1 410 -47 292 239 15 15 chr10 42710296 42710363 -97606402 - L2 LINE L2 0 3313 3247 211 289 0 0 chr10 42710752 42710804 -97605961 - MIR SINE MIR -116 146 95 219 358 75 0 chr10 42710807 42710941 -97605824 + L2 LINE L2 2272 2415 -899 806 266 82 11 chr10 42711928 42712282 -97604483 + L1ME4a LINE L1 5529 5907 -214 338 110 36 15 chr10 42712346 42712413 -97604352 + MER5A DNA MER1_type 4 71 -118 191 229 29 86 chr10 42717816 42717886 -97598879 - L2 LINE L2 0 3272 3207 282 29 0 0 chr10 42718258 42718293 -97598472 + (CA)n Simple_repeat Simple_repeat 2 36 0 571 339 85 21 chr10 42720361 42720736 -97596029 + L1M4 LINE L1 4943 5341 -805 219 305 0 0 chr10 42721148 42721207 -97595558 + (TG)n Simple_repeat Simple_repeat 2 60 0 2220 93 33 13 chr10 42721764 42722064 -97594701 + AluSc SINE Alu 1 306 -3 1383 254 89 0 chr10 42722246 42722605 -97594160 + MER47B DNA MER2_type 28 418 0 271 257 124 0 chr10 42725962 42726075 -97590690 - L2 LINE L2 -360 2953 2827 1138 203 94 62 chr10 42726402 42726796 -97589969 + L1MD1 LINE L1 341 1047 -5493 * 4897 219 44 102 chr10 42726791 42727805 -97588960 + L1MD1 LINE L1 1345 2416 -4220 2293 76 31 7 chr10 42727805 42728095 -97588670 + AluY SINE Alu 1 297 -14 4897 219 44 102 chr10 42728095 42728816 -97587949 + L1MD1 LINE L1 2416 3177 -3459 2339 109 0 3 chr10 42728816 42729128 -97587637 - AluY SINE Alu 0 311 1 4897 219 44 102 chr10 42729128 42732907 -97583858 + L1MD1 LINE L1 3177 7173 537 342 0 0 0 chr10 42732907 42732945 -97583820 + (TG)n Simple_repeat Simple_repeat 1 38 0 2314 99 3 0 chr10 42732946 42733240 -97583525 - AluSp SINE Alu -18 295 1 4897 219 44 102 chr10 42733240 42733378 -97583387 + L1MD1 LINE L1 6492 6636 0 836 258 58 58 chr10 42733476 42733871 -97582894 - HAL1 LINE L1 -7 2500 2106 515 218 28 28 chr10 42733900 42734042 -97582723 - L2 LINE L2 -4 3309 3168 1097 250 64 5 chr10 42735542 42737287 -97579478 - L1M4 LINE L1 -1217 4929 2992 319 213 0 27 chr10 42737579 42737654 -97579111 - L1ME4a LINE L1 0 6121 6049 2240 133 3 0 chr10 42737739 42738100 -97578665 - L1PB1 LINE L1 -2 6149 5788 202 143 24 0 chr10 42738333 42738375 -97578390 + T-rich Low_complexity Low_complexity 3 45 0 1279 214 79 9 chr10 42738416 42738757 -97578008 - MLT1A1 LTR MaLR 0 365 1 274 156 0 0 chr10 42741686 42741731 -97575034 - MLT1L LTR MaLR -221 394 350 521 313 52 0 chr10 42742208 42742400 -97574365 - L3 LINE CR1 -65 1512 1311 1530 294 69 19 chr10 42742442 42743313 -97573452 + L1MEc LINE L1 969 1882 -4514 551 246 45 69 chr10 42743424 42743712 -97573053 + L1MEc LINE L1 1883 2163 -4233 751 296 25 8 chr10 42743712 42743952 -97572813 + MLT1D LTR MaLR 262 505 0 1785 225 211 20 chr10 42743954 42744550 -97572215 + L1MC4 LINE L1 330 1039 -5820 410 315 92 13 chr10 42744580 42744840 -97571925 - L1 LINE L1 -1073 5073 4791 385 323 56 56 chr10 42744893 42745212 -97571553 - L1MEd LINE L1 -5483 636 318 24 53 0 0 chr10 42745499 42745537 -97571228 + AT_rich Low_complexity Low_complexity 1 38 0 2048 154 0 13 chr10 42745815 42746120 -97570645 + AluJo SINE Alu 1 301 -11 4648 200 49 23 chr10 42749019 42750232 -97566533 - L1MD1 LINE L1 0 6242 4989 403 67 0 17 chr10 42750332 42750392 -97566373 + L1PB1 LINE L1 5913 5971 -180 24 32 0 0 chr10 42750392 42750423 -97566342 + AT_rich Low_complexity Low_complexity 1 31 0 368 253 19 29 chr10 42750423 42750527 -97566238 + L1MC4 LINE L1 2526 7513 -1340 339 281 25 39 chr10 42750502 42750673 -97566092 - L1MC4 LINE L1 -1316 6726 6613 * 21 36 0 0 chr10 42750681 42750709 -97566056 + AT_rich Low_complexity Low_complexity 1 28 0 3642 136 5 0 chr10 42750709 42751497 -97565268 - L1P5 LINE L1 -361 5790 4999 386 258 124 6 chr10 42751623 42751801 -97564964 - L1ME LINE L1 -328 5793 5595 1577 167 0 0 chr10 42754532 42754772 -97561993 - AluJo SINE Alu -72 240 1 250 333 61 0 chr10 42755698 42755830 -97560935 - L1ME LINE L1 -816 5330 5191 447 348 34 14 chr10 42756249 42756456 -97560309 - L1ME LINE L1 -1684 4462 4252 347 379 17 6 chr10 42756686 42756860 -97559905 - L1ME LINE L1 -2688 3458 3283 426 274 105 25 chr10 42760504 42760789 -97555976 - L1ME LINE L1 -3099 3047 2740 2233 94 33 3 chr10 42760842 42761141 -97555624 - AluSp SINE Alu -5 308 1 384 315 116 32 chr10 42761193 42761409 -97555356 - L1ME LINE L1 -3641 2505 2272 350 237 12 12 chr10 42761588 42761761 -97555004 + (CA)n Simple_repeat Simple_repeat 2 174 0 324 193 17 55 chr10 42761750 42761931 -97554834 + (CATA)n Simple_repeat Simple_repeat 4 177 0 * 227 288 14 0 chr10 42761932 42762005 -97554760 + (CA)n Simple_repeat Simple_repeat 1 74 0 242 329 41 0 chr10 42763513 42763586 -97553179 + MIR SINE MIR 112 187 -75 754 172 0 15 chr10 42765264 42765398 -97551367 + FLAM_C SINE Alu 2 133 0 1743 191 0 0 chr10 42765408 42765710 -97551055 + AluJb SINE Alu 1 302 0 264 200 57 0 chr10 42766486 42766556 -97550209 + MIR SINE MIR 109 182 -80 251 292 28 51 chr10 42767342 42767510 -97549255 - MIR3 SINE MIR -65 143 2 211 255 0 0 chr10 42768072 42768123 -97548642 - L2 LINE L2 -1 3312 3262 871 292 69 3 chr10 42768123 42768455 -97548310 - MLT1A1 LTR MaLR -9 356 3 223 308 53 15 chr10 42768537 42768670 -97548095 - L2 LINE L2 -307 3006 2869 220 296 235 16 chr10 42768664 42769043 -97547722 - L2 LINE L2 -579 2735 2274 * 376 246 109 9 chr10 42769743 42769853 -97546912 - MER117 DNA MER1_type -10 187 67 267 239 26 43 chr10 42772297 42772414 -97544351 + (TCTCTG)n Simple_repeat Simple_repeat 6 120 0 267 324 9 0 chr10 42776291 42776402 -97540363 - MER117 DNA MER1_type -37 160 49 4030 181 37 45 chr10 42776424 42777099 -97539666 + L1MB4 LINE L1 4644 5323 -857 1853 166 19 3 chr10 42777099 42777406 -97539359 + AluJb SINE Alu 1 312 0 4030 181 37 45 chr10 42777406 42778264 -97538501 + L1MB4 LINE L1 5323 6179 -1 890 253 161 29 chr10 42778532 42778978 -97537787 - MLT1D LTR MaLR 0 505 1 342 388 105 14 chr10 42779090 42779366 -97537399 + L1M4 LINE L1 2111 2411 -3735 252 86 0 0 chr10 42780105 42780140 -97536625 + (CA)n Simple_repeat Simple_repeat 1 35 0 376 313 16 0 chr10 42780558 42780686 -97536079 + MIR SINE MIR 6 135 -127 1117 296 90 21 chr10 42780968 42781445 -97535320 + MLT2B2 LTR ERVL 6 515 0 230 293 41 41 chr10 42781609 42781756 -97535009 + MIR SINE MIR 1 147 -115 315 269 38 113 chr10 42785405 42785591 -97531174 + HAL1 LINE L1 2 173 -2334 271 332 52 48 chr10 42785669 42785940 -97530825 + HAL1 LINE L1 423 694 -1813 2558 199 45 7 chr10 42786011 42786492 -97530273 - L1MC3 LINE L1 0 7854 7348 2574 136 24 24 chr10 42786492 42786947 -97529818 - L1PA16 LINE L1 -7 6159 5705 2558 199 45 7 chr10 42786947 42787014 -97529751 - L1MC3 LINE L1 -506 7348 7285 248 304 26 26 chr10 42787014 42787129 -97529636 - MLT1F1 LTR MaLR -429 138 24 2259 156 31 50 chr10 42787129 42787610 -97529155 - L1MC3 LINE L1 -700 7154 6683 1275 180 79 85 chr10 42787610 42788036 -97528729 + MLT2C2 LTR ERVL 1 464 0 5810 188 57 10 chr10 42788041 42789462 -97527303 - L1MC3 LINE L1 -743 5472 5187 831 117 0 29 chr10 42789504 42789641 -97527124 - FLAM_C SINE Alu 0 133 1 1604 236 137 19 chr10 42789652 42790294 -97526471 - L1MC3 LINE L1 -2378 3837 3092 2093 146 0 10 chr10 42790294 42790589 -97526176 - AluSx SINE Alu -20 292 1 1604 236 137 19 chr10 42790589 42790700 -97526065 - L1MC3 LINE L1 -3123 3092 2995 1007 122 6 61 chr10 42790700 42790922 -97525843 - FRAM SINE Alu 0 176 1 2351 109 0 0 chr10 42790946 42791249 -97525516 + AluSc SINE Alu 1 303 -6 2245 236 35 32 chr10 42791249 42791896 -97524869 - L1MC3 LINE L1 -3242 2973 2329 2438 78 0 23 chr10 42791896 42792202 -97524563 + AluY SINE Alu 1 299 -12 216 0 0 0 chr10 42792202 42792226 -97524539 + (TA)n Simple_repeat Simple_repeat 2 25 0 2245 236 35 32 chr10 42792226 42792318 -97524447 - L1MC3 LINE L1 -3885 2330 2231 2088 140 19 16 chr10 42792321 42792643 -97524122 - MER1B DNA MER1_type 0 339 17 251 146 0 42 chr10 42792647 42792695 -97524070 + MLT1A1 LTR MaLR 68 113 -252 5354 202 120 66 chr10 42792698 42794335 -97522430 + MLT1A1-int LTR MaLR 5 1729 -6 1902 191 9 3 chr10 42794412 42794758 -97522007 + MLT1A1 LTR MaLR 16 363 -2 528 241 41 21 chr10 42794760 42794905 -97521860 - L1MC3 LINE L1 -4699 1697 1550 5623 228 46 26 chr10 42794909 42795170 -97521595 + L1MB7 LINE L1 287 541 -6105 4640 164 18 30 chr10 42795170 42796084 -97520681 + MER4D LTR ERV1 1 903 0 5623 228 46 26 chr10 42796084 42797292 -97519473 + L1MB7 LINE L1 541 1864 -4782 1834 171 35 0 chr10 42797292 42797579 -97519186 + AluJo SINE Alu 1 297 -15 5623 228 46 26 chr10 42797579 42798197 -97518568 + L1MB7 LINE L1 1864 2468 -4178 459 0 0 0 chr10 42798198 42798249 -97518516 + (TA)n Simple_repeat Simple_repeat 1 51 0 2816 228 38 11 chr10 42798252 42799068 -97517697 + L1MB7 LINE L1 2612 3449 -3195 2344 124 3 3 chr10 42799074 42799429 -97517336 + THE1A LTR MaLR 1 355 0 359 184 83 0 chr10 42799435 42799544 -97517221 + L1MB7 LINE L1 3689 3806 -2838 27 29 0 0 chr10 42799559 42799593 -97517172 + AT_rich Low_complexity Low_complexity 1 34 0 9922 114 22 5 chr10 42799601 42801520 -97515245 - L1P4 LINE L1 -500 5668 3715 1291 218 146 23 chr10 42801526 42801966 -97514799 + L1MB7 LINE L1 4202 4695 -1949 21 57 0 0 chr10 42802322 42802357 -97514408 + AT_rich Low_complexity Low_complexity 1 35 0 657 234 13 0 chr10 42803334 42803492 -97513273 + L1MB7 LINE L1 4709 4868 -1776 1683 176 6 42 chr10 42803493 42803805 -97512960 + AluJo SINE Alu 1 301 -11 248 175 35 0 chr10 42803806 42803863 -97512902 + GA-rich Low_complexity Low_complexity 1 59 0 992 266 30 32 chr10 42803881 42804253 -97512512 + L1MB7 LINE L1 6194 6564 -118 27 29 0 0 chr10 42804988 42805022 -97511743 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 42805123 42805145 -97511620 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 42805180 42805206 -97511559 + GC_rich Low_complexity Low_complexity 1 26 0 213 283 50 0 chr10 42805490 42805550 -97511215 + MIR SINE MIR 90 152 -56 238 274 80 26 chr10 42807547 42807660 -97509105 - MIR SINE MIR -55 207 89 904 226 113 28 chr10 42810005 42810056 -97506709 + MER58B DNA MER1_type 37 82 -2338 1990 110 28 0 chr10 42810056 42810387 -97506378 - AluSg SINE Alu 0 310 1 904 226 113 28 chr10 42810387 42810583 -97506182 + MER58B DNA MER1_type 82 305 -36 374 309 133 5 chr10 42810840 42811050 -97505715 - MIR SINE MIR 0 262 26 397 279 32 50 chr10 42811112 42811356 -97505409 - L1MC4a LINE L1 -305 5816 5600 396 0 0 0 chr10 42811379 42811423 -97505342 + (TG)n Simple_repeat Simple_repeat 1 44 0 346 203 141 55 chr10 42811423 42811551 -97505214 - MIR3 SINE MIR 0 208 70 1705 224 35 29 chr10 42812687 42813174 -97503591 - L1ME1 LINE L1 -5 6161 5672 1195 220 7 14 chr10 42813174 42813451 -97503314 - MER93b LTR ERV1 0 373 99 1488 157 83 43 chr10 42813452 42813752 -97503013 - AluJo SINE Alu 0 312 1 431 196 33 11 chr10 42813924 42814016 -97502749 - L1ME1 LINE L1 -491 5675 5582 1921 174 34 32 chr10 42814077 42814630 -97502135 - MLT2A2 LTR ERVL 0 554 1 769 177 14 34 chr10 42814630 42814777 -97501988 + FRAM SINE Alu 2 145 -31 6706 206 70 24 chr10 42814836 42815007 -97501758 - L1ME1 LINE L1 -611 5555 5393 2809 3 0 0 chr10 42815007 42815317 -97501448 - AluYa5 SINE Alu -1 310 1 6706 206 70 24 chr10 42815317 42817116 -97499649 - L1ME1 LINE L1 -773 5393 3678 216 0 0 0 chr10 42817116 42817140 -97499625 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2028 100 0 17 chr10 42817140 42817429 -97499336 - AluY SINE Alu -27 284 1 6706 206 70 24 chr10 42817429 42817828 -97498937 - L1ME1 LINE L1 -2487 3679 3550 992 184 3 82 chr10 42817829 42818145 -97498620 + AluSp SINE Alu 2 292 -11 403 311 32 37 chr10 42819994 42820184 -97496581 - MIR SINE MIR 0 262 74 286 250 120 0 chr10 42820613 42820713 -97496052 + MIR3 SINE MIR 67 178 -30 2487 238 137 19 chr10 42821762 42822545 -97494220 + L1MB5 LINE L1 5299 6173 -1 214 211 0 0 chr10 42824981 42825019 -97491746 + (TTA)n Simple_repeat Simple_repeat 1 38 0 187 279 59 15 chr10 42825863 42825931 -97490834 + MIR SINE MIR 123 193 -69 576 162 26 0 chr10 42830772 42830889 -97485876 - MER3 DNA MER1_type 0 209 90 297 339 76 0 chr10 42831855 42831973 -97484792 + L2 LINE L2 3187 3313 0 212 255 0 0 chr10 42833570 42833617 -97483148 - MIR SINE MIR -108 154 108 201 311 16 0 chr10 42833687 42833748 -97483017 + GA-rich Low_complexity Low_complexity 4 65 0 324 252 149 7 chr10 42834901 42835036 -97481729 - MIR SINE MIR -62 146 33 867 152 8 0 chr10 42835066 42835198 -97481567 - FLAM_C SINE Alu 0 133 1 240 338 132 7 chr10 42835414 42835550 -97481215 - MIR SINE MIR -3 259 107 21 36 0 0 chr10 42837632 42837660 -97479105 + GC_rich Low_complexity Low_complexity 1 28 0 195 169 0 45 chr10 42837679 42837768 -97478997 + (CCCCG)n Simple_repeat Simple_repeat 5 89 0 234 0 0 0 chr10 42838502 42838528 -97478237 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 2526 185 93 96 chr10 42838531 42839171 -97477594 + L1M4 LINE L1 4357 4998 -1180 2174 103 3 10 chr10 42839171 42839473 -97477292 - AluSp SINE Alu -13 300 1 2526 185 93 96 chr10 42839473 42839546 -97477219 + L1M4 LINE L1 4998 5070 -1108 1746 124 103 0 chr10 42839546 42839828 -97476937 - AluSx SINE Alu 0 312 2 2526 185 93 96 chr10 42839828 42840386 -97476379 + L1M4 LINE L1 5070 5629 -549 1893 110 0 69 chr10 42840386 42840703 -97476062 - AluSx SINE Alu -13 299 5 2526 185 93 96 chr10 42840703 42840834 -97475931 + L1M4 LINE L1 5629 5759 -419 191 30 0 61 chr10 42841240 42841273 -97475492 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 188 298 106 16 chr10 42841670 42841858 -97474907 - L2 LINE L2 -302 3011 2807 279 275 14 0 chr10 42842415 42842484 -97474281 + L2 LINE L2 3233 3302 -11 230 81 27 0 chr10 42842485 42842522 -97474243 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 3471 57 25 11 chr10 42842539 42842977 -97473788 - MLT2A1 LTR ERVL 0 444 1 588 203 11 11 chr10 42842977 42843154 -97473611 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 1476 177 83 50 chr10 42843154 42843516 -97473249 + MLT1B LTR MaLR 1 374 -16 1482 205 112 68 chr10 42844565 42845083 -97471682 - MER45B DNA AcHobo -83 957 417 265 295 74 0 chr10 42845223 42845318 -97471447 - MER45B DNA AcHobo -886 154 53 560 253 7 115 chr10 42846022 42846326 -97470439 - L1MC4a LINE L1 0 7808 7538 270 266 13 25 chr10 42846407 42846486 -97470279 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 240 246 104 29 chr10 42846797 42846917 -97469848 + MIR SINE MIR 41 169 -39 231 301 188 23 chr10 42848585 42848841 -97467924 + L2 LINE L2 2453 2750 -564 1262 166 68 108 chr10 42849657 42849894 -97466871 - MLT1A1 LTR MaLR 0 365 147 918 97 22 103 chr10 42849894 42850079 -97466686 - L1MA3 LINE L1 0 6305 6136 1262 166 68 108 chr10 42850079 42850221 -97466544 - MLT1A1 LTR MaLR -218 147 1 23 0 0 0 chr10 42850257 42850280 -97466485 + AT_rich Low_complexity Low_complexity 1 23 0 4320 244 115 53 chr10 42850290 42850582 -97466183 + L1M4 LINE L1 2 275 -6371 2314 83 0 19 chr10 42850582 42850895 -97465870 - AluY SINE Alu -4 307 1 4320 244 115 53 chr10 42850895 42852724 -97464041 + L1M4 LINE L1 275 2499 -4147 1220 196 25 39 chr10 42852726 42853259 -97463506 - L1M4 LINE L1 -3675 2707 2183 * 3946 164 46 12 chr10 42853256 42854016 -97462749 + L1MB3 LINE L1 5391 6176 -7 2677 238 61 26 chr10 42854345 42855088 -97461677 + L1ME1 LINE L1 5383 6151 -15 252 0 0 0 chr10 42856859 42856887 -97459878 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 552 152 0 0 chr10 42858430 42858529 -97458236 + (CA)n Simple_repeat Simple_repeat 1 99 0 707 261 207 10 chr10 42865169 42865652 -97451113 + MLT1G1 LTR MaLR 2 579 -16 1591 181 3 7 chr10 42866846 42867128 -97449637 - AluJo SINE Alu -1 311 31 4270 211 96 19 chr10 42868451 42868729 -97448036 + L1MDa LINE L1 507 762 -5778 2439 91 0 0 chr10 42868729 42869025 -97447740 + AluSg SINE Alu 1 296 -14 4270 211 96 19 chr10 42869025 42870016 -97446749 + L1MDa LINE L1 762 2108 -4432 3009 138 61 18 chr10 42870018 42870197 -97446568 + L1MD1 LINE L1 5646 5816 -426 1696 181 20 10 chr10 42870197 42870495 -97446270 - AluJb SINE Alu -11 301 1 3009 138 61 18 chr10 42870495 42870887 -97445878 + L1MD1 LINE L1 5816 6242 0 561 254 30 30 chr10 42871159 42871324 -97445441 - L1MC4 LINE L1 -521 7521 7357 285 228 93 33 chr10 42871383 42871579 -97445186 + L1ME LINE L1 5268 5469 -871 3521 229 69 41 chr10 42871592 42872855 -97443910 - L1MD3 LINE L1 -7 8035 6749 666 213 91 110 chr10 42873915 42874169 -97442596 + MIR SINE MIR 14 262 0 415 261 127 62 chr10 42874277 42874664 -97442101 - MLT1J LTR MaLR 0 511 100 264 257 40 0 chr10 42876128 42876202 -97440563 - MIR SINE MIR -92 170 94 271 278 170 31 chr10 42876638 42876832 -97439933 + L2 LINE L2 1567 1787 -1527 362 258 102 57 chr10 42877624 42878039 -97438726 - MLT1E LTR MaLR -1 592 99 261 241 38 90 chr10 42878160 42878293 -97438472 + L2 LINE L2 3175 3300 -13 794 170 48 30 chr10 42878617 42878782 -97437983 + AluJo SINE Alu 121 288 -24 237 320 40 16 chr10 42878881 42879006 -97437759 + L1ME LINE L1 5683 5810 -352 2294 112 7 0 chr10 42879780 42880083 -97436682 - AluSx SINE Alu -7 305 1 445 298 96 34 chr10 42881256 42881746 -97435019 + MLT1G1 LTR MaLR 2 595 0 226 0 29 29 chr10 42882750 42882785 -97433980 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1218 185 50 80 chr10 42882832 42883194 -97433571 - MLT1B LTR MaLR -9 381 31 228 172 16 31 chr10 42884004 42884068 -97432697 + MLT1B LTR MaLR 190 252 -138 220 221 60 14 chr10 42885712 42885786 -97430979 + MIR SINE MIR 114 194 -56 433 158 0 0 chr10 42888328 42888404 -97428361 + AluSp/q SINE Alu 236 311 -2 508 219 28 17 chr10 42888404 42888582 -97428183 - L1MEc LINE L1 -2588 3627 3448 * 4447 244 85 39 chr10 42888574 42890320 -97426445 - L1MEc LINE L1 -4535 1861 36 191 310 35 0 chr10 42890339 42890397 -97426368 + L3 LINE CR1 1517 1576 -1 2100 45 86 0 chr10 42891385 42891653 -97425112 + AluY SINE Alu 1 291 -20 2097 128 28 3 chr10 42892760 42893050 -97423715 + AluSx SINE Alu 1 297 -15 2089 149 12 32 chr10 42894877 42895220 -97421545 - MER1B DNA MER1_type 0 337 2 327 309 43 56 chr10 42895799 42895971 -97420794 + L2 LINE L2 2185 2358 -914 2531 80 0 0 chr10 42895971 42896270 -97420495 + AluSc SINE Alu 3 301 -8 327 309 43 56 chr10 42896270 42896340 -97420425 + L2 LINE L2 2358 3235 -37 233 173 0 0 chr10 42896375 42896427 -97420338 - L1MC4 LINE L1 -1340 6702 6651 227 208 0 0 chr10 42897447 42897500 -97419265 - L1ME3 LINE L1 -4 6158 6106 1395 143 62 0 chr10 42897512 42897722 -97419043 - AluJo SINE Alu -5 307 85 364 236 11 0 chr10 42897722 42897811 -97418954 - L1ME2 LINE L1 -57 6107 6018 273 305 124 41 chr10 42898221 42898536 -97418229 - MARNA DNA Mariner -142 444 104 243 149 128 0 chr10 42899317 42899364 -97417401 + L2 LINE L2 3220 3272 0 220 214 0 54 chr10 42899709 42899765 -97417000 - L2 LINE L2 -6 3266 3214 546 268 147 52 chr10 42900328 42900634 -97416131 - MLT1K LTR MaLR -114 474 140 666 244 44 0 chr10 42900920 42901100 -97415665 - MER5A DNA MER1_type -1 188 1 574 256 241 23 chr10 42901465 42901727 -97415038 - L2 LINE L2 0 3313 2995 2365 108 0 0 chr10 42902787 42903083 -97413682 + AluSc SINE Alu 1 296 -13 2334 82 0 7 chr10 42903162 42903456 -97413309 + AluY SINE Alu 1 292 -19 1026 134 53 53 chr10 42903472 42903719 -97413046 + L1MA8 LINE L1 6042 6288 -3 804 192 27 0 chr10 42903739 42903885 -97412880 + AluJo SINE Alu 2 151 -161 2043 97 75 0 chr10 42903929 42904208 -97412557 + AluSx SINE Alu 1 300 -12 365 268 155 14 chr10 42904373 42904515 -97412250 + L3 LINE CR1 1334 1495 -82 1217 136 91 0 chr10 42905790 42906033 -97410732 - L1MD3 LINE L1 0 7995 7731 2313 110 0 0 chr10 42906399 42906700 -97410065 + AluSg SINE Alu 1 301 -9 237 231 0 0 chr10 42906841 42906893 -97409872 + L1P LINE L1 3625 3676 -2470 363 23 0 0 chr10 42906894 42906938 -97409827 + (CA)n Simple_repeat Simple_repeat 2 45 0 787 276 112 51 chr10 42907505 42907933 -97408832 + HAL1 LINE L1 833 1286 -1221 471 274 65 49 chr10 42907973 42908218 -97408547 + HAL1 LINE L1 1426 1674 -833 4166 194 92 34 chr10 42908407 42909510 -97407255 + L1MC3 LINE L1 6616 7783 -2 2357 91 7 0 chr10 42909581 42909879 -97406886 - AluSq SINE Alu -15 298 1 234 295 128 0 chr10 42909981 42910059 -97406706 + MIR SINE MIR 53 140 -122 526 259 131 30 chr10 42910597 42910833 -97405932 - MIR SINE MIR -1 261 2 330 356 16 21 chr10 42911352 42911543 -97405222 - L2 LINE L2 -888 2426 2237 1867 153 0 0 chr10 42911862 42912157 -97404608 + AluSx SINE Alu 4 298 -14 631 202 16 8 chr10 42912203 42912332 -97404433 - L2 LINE L2 0 3313 3184 204 330 70 9 chr10 42912389 42912504 -97404261 + L2 LINE L2 1220 1341 -1973 300 357 67 20 chr10 42912504 42912759 -97404006 + L2 LINE L2 2255 2521 -793 390 302 160 0 chr10 42912885 42913054 -97403711 + L2 LINE L2 3118 3313 0 1103 231 19 0 chr10 42913245 42913461 -97403304 - MER58A DNA MER1_type -1 223 4 194 231 135 0 chr10 42913824 42913876 -97402889 + L2 LINE L2 3162 3220 -93 1664 159 4 7 chr10 42914745 42915015 -97401750 - AluJb SINE Alu -43 269 1 4871 196 51 34 chr10 42915412 42916326 -97400439 - L1MB7 LINE L1 0 6995 6098 845 215 112 50 chr10 42916326 42916491 -97400274 + MER2 DNA MER2_type 4 157 -187 2353 64 10 0 chr10 42916491 42916787 -97399978 + AluY SINE Alu 1 299 -12 845 215 112 50 chr10 42916787 42916942 -97399823 + MER2 DNA MER2_type 157 344 0 4871 196 51 34 chr10 42916942 42918304 -97398461 - L1MB7 LINE L1 -897 6098 521 6630 163 38 11 chr10 42918350 42919591 -97397174 - L1MCa LINE L1 -5129 1297 23 938 169 0 0 chr10 42919781 42919941 -97396824 + FRAM SINE Alu 1 159 -17 647 98 0 0 chr10 42919952 42920034 -97396731 + AluS SINE Alu 2 83 -229 1954 48 24 0 chr10 42920034 42920285 -97396480 - MER11B LTR ERVK -979 257 1 828 323 93 15 chr10 42920286 42920685 -97396080 + L2 LINE L2 1838 2267 -1047 1818 132 23 3 chr10 42920749 42921053 -97395712 + AluJb SINE Alu 1 310 -2 307 182 76 0 chr10 42921067 42921133 -97395632 + L1ME4a LINE L1 6016 6086 -35 29 0 0 0 chr10 42923207 42923236 -97393529 + AT_rich Low_complexity Low_complexity 1 29 0 240 184 204 20 chr10 42923704 42923851 -97392914 - L1ME2 LINE L1 -201 5963 5790 1136 189 56 14 chr10 42923852 42924318 -97392447 - MER34 LTR ERV1 0 542 27 294 268 155 88 chr10 42924328 42924645 -97392120 - L1ME2 LINE L1 -370 5792 5455 299 217 20 99 chr10 42924680 42924832 -97391933 - L1ME2 LINE L1 -843 5303 5164 5770 126 24 10 chr10 42924876 42925836 -97390929 - L1MC1 LINE L1 0 6333 5361 622 127 8 85 chr10 42925836 42925954 -97390811 - AluJb SINE Alu -12 300 192 3689 203 52 33 chr10 42926526 42926751 -97390014 + L1MB3 LINE L1 5103 5322 -861 2083 110 3 25 chr10 42926751 42927070 -97389695 + AluSx SINE Alu 1 312 0 3689 203 52 33 chr10 42927070 42927893 -97388872 + L1MB3 LINE L1 5322 6181 -2 195 146 0 0 chr10 42928432 42928473 -97388292 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 235 291 36 27 chr10 42929159 42929269 -97387496 + L1MEc LINE L1 1532 1642 -4754 197 284 30 15 chr10 42932006 42932073 -97384692 - MIR SINE MIR -59 149 82 552 208 40 0 chr10 42932152 42932277 -97384488 - MER45A DNA AcHobo -48 130 1 3701 158 23 12 chr10 42933474 42933819 -97382946 - L1MB3 LINE L1 -2 6181 5824 2095 136 3 0 chr10 42933819 42934128 -97382637 - AluSx SINE Alu -2 310 1 3701 158 23 12 chr10 42934128 42934438 -97382327 - L1MB3 LINE L1 -359 5824 5519 2043 87 3 17 chr10 42934635 42934971 -97381794 + AluSp SINE Alu 1 332 0 1141 317 106 9 chr10 42934973 42935513 -97381252 - L1ME2 LINE L1 -22 6142 5551 187 288 0 45 chr10 42935612 42935678 -97381087 + L2 LINE L2 341 403 -2911 23 33 0 0 chr10 42935783 42935813 -97380952 + AT_rich Low_complexity Low_complexity 1 30 0 527 186 45 96 chr10 42937121 42937320 -97379445 - LTR41 LTR ERVL -21 752 564 197 304 76 0 chr10 42937478 42937557 -97379208 - L2 LINE L2 -246 3067 2983 492 294 0 22 chr10 42938149 42938285 -97378480 - L2 LINE L2 -1 3312 3180 369 293 73 69 chr10 42938439 42938876 -97377889 - L2 LINE L2 -366 2948 2510 1516 74 10 0 chr10 42939738 42939940 -97376825 + AluSg/x SINE Alu 94 297 -15 22 35 0 0 chr10 42940868 42940897 -97375868 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 42941011 42941032 -97375733 + GC_rich Low_complexity Low_complexity 1 21 0 378 271 121 0 chr10 42942461 42942601 -97374164 + LTR16C LTR ERVL 324 480 -11 387 0 0 0 chr10 42942970 42943013 -97373752 + (CA)n Simple_repeat Simple_repeat 1 43 0 1675 191 3 35 chr10 42943023 42943369 -97373396 - MER4D LTR ERV1 -9 894 560 240 250 16 0 chr10 42943381 42943445 -97373320 - MER4E LTR ERV1 -615 164 100 1461 124 106 36 chr10 42943473 42943747 -97373018 + AluJb SINE Alu 1 293 -19 1671 153 28 3 chr10 42943761 42944048 -97372717 - MER49 LTR ERV1 -629 294 1 412 234 38 19 chr10 42944053 42944211 -97372554 + (CA)n Simple_repeat Simple_repeat 2 162 0 433 214 11 0 chr10 42947040 42947129 -97369636 - MER53 DNA DNA -6 183 94 306 183 84 0 chr10 42949626 42949697 -97367068 + MIR SINE MIR 80 156 -106 341 283 6 35 chr10 42955190 42955363 -97361402 + (CACGC)n Simple_repeat Simple_repeat 4 171 0 1832 135 3 11 chr10 42958037 42958319 -97358446 - AluSx SINE Alu -32 280 1 328 302 164 25 chr10 42960730 42961005 -97355760 - MER102b DNA MER1_type -10 331 19 359 294 46 0 chr10 42961031 42961140 -97355625 - L2 LINE L2 -3 3269 3156 663 154 118 22 chr10 42966924 42967060 -97349705 + Tigger1 DNA MER2_type 3 151 -2267 * 989 179 41 50 chr10 42967057 42967275 -97349490 + Tigger1 DNA MER2_type 2203 2418 0 1847 188 41 39 chr10 42968704 42969168 -97347597 - MER89 LTR ERV1 0 559 1 2416 179 61 7 chr10 42969168 42969808 -97346957 - MER89-int LTR ERV1 0 6801 6095 248 228 0 18 chr10 42969817 42969874 -97346891 + MLT1C LTR MaLR 404 459 -8 4272 199 29 79 chr10 42969882 42970637 -97346128 - MER89-int LTR ERV1 -4754 2047 1382 1347 195 36 7 chr10 42970637 42970914 -97345851 - AluJo SINE Alu -27 285 1 4272 199 29 79 chr10 42970914 42971446 -97345319 - MER89-int LTR ERV1 -5419 1382 825 897 266 104 44 chr10 42971637 42972110 -97344655 - MER89-int LTR ERV1 -6267 534 34 560 183 26 26 chr10 42972138 42972253 -97344512 - MER89 LTR ERV1 -27 532 418 721 102 0 0 chr10 42972555 42972653 -97344112 + AluJ/FLAM SINE Alu 2 99 -213 1724 281 107 69 chr10 42972955 42974243 -97342522 - L1M4 LINE L1 -1115 5031 3655 1659 152 0 64 chr10 42974243 42974571 -97342194 - AluJo SINE Alu -5 307 1 1724 281 107 69 chr10 42974571 42975043 -97341722 - L1M4 LINE L1 -2491 3655 3203 939 243 60 39 chr10 42975040 42975623 -97341142 - L1ME LINE L1 -616 5617 5012 * 337 315 132 15 chr10 42975617 42976112 -97340653 - L1ME LINE L1 -4651 1566 1139 * 287 247 41 10 chr10 42976134 42976231 -97340534 + L1MEd LINE L1 895 994 -5125 2360 50 3 16 chr10 42976232 42976535 -97340230 - AluY SINE Alu -12 299 1 435 336 87 52 chr10 42976577 42977023 -97339742 - L1ME LINE L1 -5508 697 236 252 253 48 24 chr10 42978172 42978255 -97338510 - MER5A DNA MER1_type -58 131 47 541 252 15 15 chr10 42978603 42978734 -97338031 - MER3 DNA MER1_type -77 132 2 380 299 30 25 chr10 42986957 42987154 -97329611 + MER113 DNA MER1_type? 26 223 -298 202 211 48 66 chr10 42987656 42987822 -97328943 + (CAGCC)n Simple_repeat Simple_repeat 4 166 0 * 405 214 9 73 chr10 42987737 42988084 -97328681 + (CCCCAG)n Simple_repeat Simple_repeat 1 324 0 237 183 0 56 chr10 42988099 42988170 -97328595 + C-rich Low_complexity Low_complexity 5 71 0 183 394 0 0 chr10 42991399 42991465 -97325300 - L2 LINE L2 -339 2975 2910 477 0 0 0 chr10 42992279 42992332 -97324433 + (CA)n Simple_repeat Simple_repeat 2 54 0 333 233 121 0 chr10 42992573 42992689 -97324076 + MER5A DNA MER1_type 23 152 -37 247 217 67 0 chr10 42992716 42992776 -97323989 - MIR SINE MIR -55 153 90 216 250 17 33 chr10 42992789 42992849 -97323916 + L2 LINE L2 3007 3065 -207 311 288 72 0 chr10 42994918 42995029 -97321736 - MIR3 SINE MIR -1 207 89 225 0 0 0 chr10 42995862 42995887 -97320878 + (CCCGG)n Simple_repeat Simple_repeat 2 26 0 62 88 0 0 chr10 42995975 42996135 -97320630 + GC_rich Low_complexity Low_complexity 1 160 0 242 247 32 11 chr10 42996703 42996796 -97319969 + CT-rich Low_complexity Low_complexity 1 95 0 524 191 139 91 chr10 42997183 42997338 -97319427 + MIR SINE MIR 28 197 -65 1750 144 7 20 chr10 42997338 42997357 -97319408 - AluSx SINE Alu -11 301 283 306 0 0 0 chr10 42997357 42997391 -97319374 + (TG)n Simple_repeat Simple_repeat 1 34 0 1750 144 7 20 chr10 42997391 42997676 -97319089 - AluSx SINE Alu -29 283 1 524 191 139 91 chr10 42997676 42997729 -97319036 + MIR SINE MIR 197 246 -16 276 225 34 22 chr10 42998250 42998428 -97318337 + (TG)n Simple_repeat Simple_repeat 1 180 0 558 198 0 0 chr10 42998448 42998625 -97318140 + (TG)n Simple_repeat Simple_repeat 2 178 0 2153 114 20 0 chr10 42999182 42999488 -97317277 + AluSp SINE Alu 1 312 -1 212 232 29 14 chr10 42999687 42999756 -97317009 + MIR SINE MIR 62 131 -77 1586 104 4 33 chr10 43000332 43000602 -97316163 - AluY SINE Alu -48 263 2 1009 105 37 73 chr10 43000604 43000756 -97316009 - MER46B DNA MER2_type -2672 59 39 1983 149 3 0 chr10 43000756 43001057 -97315708 - AluJb SINE Alu -8 304 3 1009 105 37 73 chr10 43001057 43001095 -97315670 - MER46B DNA MER2_type -2692 39 1 225 216 0 0 chr10 43001058 43001109 -97315656 + MER46A DNA MER2_type 108 158 -78 * 566 199 79 130 chr10 43001193 43001220 -97315545 + Charlie2 DNA MER1_type 2467 2494 -368 1736 128 39 39 chr10 43001220 43001525 -97315240 + AluSx SINE Alu 1 305 -7 566 199 79 130 chr10 43001525 43001913 -97314852 + Charlie2 DNA MER1_type 2494 2861 -1 369 350 117 7 chr10 43002067 43002376 -97314389 - L2 LINE L2 -749 2565 2223 2360 58 7 0 chr10 43002456 43002750 -97314015 - AluSc SINE Alu -13 296 1 798 127 16 0 chr10 43002752 43002878 -97313887 - AluJo/FLAM SINE Alu -170 132 5 387 221 0 0 chr10 43003065 43003223 -97313542 + (CA)n Simple_repeat Simple_repeat 2 159 0 1484 355 57 37 chr10 43003302 43004418 -97312347 - L1M4 LINE L1 -1806 4340 3202 291 149 0 0 chr10 43004437 43004484 -97312281 - Alu SINE Alu -254 47 1 451 335 148 38 chr10 43004492 43005057 -97311708 - L1M4 LINE L1 -2876 3270 2647 2870 227 60 22 chr10 43005290 43005976 -97310789 - MER21B LTR ERV1 -113 750 39 3536 190 29 36 chr10 43006254 43006288 -97310477 + L1MD2 LINE L1 5557 5590 -769 2347 96 0 3 chr10 43006288 43006602 -97310163 - AluSq SINE Alu 0 313 1 3536 190 29 36 chr10 43006602 43007353 -97309412 + L1MD2 LINE L1 5590 6337 -22 2152 123 0 0 chr10 43007353 43007655 -97309110 - AluSx SINE Alu -10 302 1 23 54 0 0 chr10 43007656 43007693 -97309072 + AT_rich Low_complexity Low_complexity 1 37 0 240 293 0 13 chr10 43008030 43008105 -97308660 + C-rich Low_complexity Low_complexity 3 76 0 2157 96 0 0 chr10 43008322 43008627 -97308138 + AluSg SINE Alu 1 305 0 1496 213 0 0 chr10 43008627 43008913 -97307852 + L1ME LINE L1 5319 5604 -562 519 176 17 50 chr10 43008914 43009033 -97307732 + FLAM_C SINE Alu 1 115 -28 1828 112 11 4 chr10 43009048 43009315 -97307450 - AluSx SINE Alu -43 269 1 730 97 14 42 chr10 43009614 43009758 -97307007 + AluY SINE Alu 167 306 -5 962 90 52 7 chr10 43009758 43009913 -97306852 + Tigger4(Zombi) DNA MER2_type 2545 2706 -25 1798 140 7 14 chr10 43009913 43010206 -97306559 - AluSx SINE Alu -14 298 8 1226 129 2 5 chr10 43010136 43010215 -97306550 - AluSp SINE Alu -101 212 134 2125 84 44 20 chr10 43010215 43010512 -97306253 - AluY SINE Alu -7 304 1 1226 129 2 5 chr10 43010512 43010646 -97306119 - AluSp SINE Alu -179 134 1 1139 172 25 54 chr10 43010649 43010805 -97305960 - AluSg/x SINE Alu -18 292 133 2296 78 30 0 chr10 43010805 43011100 -97305665 - AluY SINE Alu -7 304 1 2142 106 10 10 chr10 43011106 43011398 -97305367 - AluSq SINE Alu -21 292 1 1139 172 25 54 chr10 43011398 43011438 -97305327 - AluSg/x SINE Alu -182 128 95 4733 86 25 20 chr10 43011438 43011580 -97305185 + LTR8 LTR ERV1 1 141 -550 1709 110 50 50 chr10 43011580 43011887 -97304878 - AluSq SINE Alu 0 309 3 4733 86 25 20 chr10 43011887 43012431 -97304334 + LTR8 LTR ERV1 141 691 0 310 149 0 0 chr10 43012440 43012487 -97304278 + AluSq/x SINE Alu 57 103 -199 246 152 0 0 chr10 43012490 43012537 -97304228 - AluS SINE Alu -155 148 108 401 119 0 0 chr10 43012537 43012596 -97304169 - AluS SINE Alu -259 59 1 2404 98 3 0 chr10 43012598 43012905 -97303860 - AluSp SINE Alu -5 308 1 1445 170 61 47 chr10 43012907 43013249 -97303516 - LTR54 LTR ERV1 -30 480 134 1068 168 0 41 chr10 43013332 43013347 -97303418 - AluJb SINE Alu -2 310 296 1993 73 112 38 chr10 43013347 43013634 -97303131 - AluSq SINE Alu -1 312 5 2109 125 0 4 chr10 43013634 43013915 -97302850 - AluSx SINE Alu -31 281 2 1068 168 0 41 chr10 43013915 43014094 -97302671 - AluJb SINE Alu -14 298 123 357 143 0 0 chr10 43014098 43014175 -97302590 - L1M4 LINE L1 -1657 4987 4911 2320 121 0 0 chr10 43014182 43014479 -97302286 - AluSq SINE Alu -16 297 1 2352 62 45 3 chr10 43014486 43014777 -97301988 - AluY SINE Alu -8 303 1 1717 150 20 41 chr10 43015043 43015337 -97301428 - AluJo SINE Alu -22 290 3 1729 175 30 0 chr10 43016055 43016352 -97300413 + AluJb SINE Alu 1 306 -6 3533 217 87 52 chr10 43016803 43017323 -97299442 - L1M4 LINE L1 -3051 3593 3092 7026 67 6 279 chr10 43017323 43019231 -97297534 - SVA Other Other 0 1386 1 3533 217 87 52 chr10 43019231 43019560 -97297205 - L1M4 LINE L1 -3552 3092 2776 2375 106 0 3 chr10 43019560 43019871 -97296894 - AluY SINE Alu -1 310 1 3533 217 87 52 chr10 43019871 43022347 -97294418 - L1M4 LINE L1 -3868 2776 10 331 352 28 16 chr10 43022358 43022605 -97294160 + L1ME LINE L1 5561 5810 -311 1892 95 0 12 chr10 43025063 43025316 -97291449 + AluSq SINE Alu 1 250 -63 29 0 0 0 chr10 43025412 43025441 -97291324 + AT_rich Low_complexity Low_complexity 1 29 0 803 284 240 20 chr10 43025570 43025772 -97290993 + L2 LINE L2 1706 1862 -1451 2259 104 0 7 chr10 43025772 43026061 -97290704 - AluSx SINE Alu -17 295 9 803 284 240 20 chr10 43026061 43027035 -97289730 + L2 LINE L2 1862 3150 -163 2089 143 0 6 chr10 43027116 43027430 -97289335 + AluSx SINE Alu 1 312 0 190 383 50 0 chr10 43027879 43028020 -97288745 + MIR SINE MIR 2 149 -113 357 288 158 19 chr10 43028684 43028899 -97287866 + LTR16A LTR ERVL 57 301 -149 8427 55 2 1 chr10 43029176 43030144 -97286621 - LTR5 LTR ERVK 0 969 1 286 309 0 0 chr10 43030565 43030633 -97286132 + HERV16 LTR ERVL 799 866 -4130 1201 146 35 10 chr10 43030757 43030982 -97285783 - AluJb SINE Alu 0 312 86 560 254 49 0 chr10 43030985 43031127 -97285638 + HERV16 LTR ERVL 982 1130 -3866 1066 294 47 7 chr10 43031291 43031685 -97285080 + HERV16 LTR ERVL 1758 2175 -2904 733 139 0 0 chr10 43031686 43031801 -97284964 - AluSp/q SINE Alu -3 310 196 1093 199 164 0 chr10 43031801 43032032 -97284733 - AluSx SINE Alu -43 269 1 274 255 41 10 chr10 43032034 43032052 -97284713 - L1MA10 LINE L1 -65 6269 6252 925 213 29 126 chr10 43032052 43032347 -97284418 - L1ME1 LINE L1 -76 6090 5768 384 100 0 0 chr10 43032347 43032407 -97284358 - Alu SINE Alu 0 302 243 925 213 29 126 chr10 43032407 43032466 -97284299 - L1ME1 LINE L1 -398 5768 5705 2063 108 40 20 chr10 43032466 43032762 -97284003 - AluSg SINE Alu -8 302 1 925 213 29 126 chr10 43032762 43032929 -97283836 - L1ME1 LINE L1 -461 5705 5589 29 0 0 0 chr10 43033097 43033126 -97283639 + AT_rich Low_complexity Low_complexity 1 29 0 282 73 0 0 chr10 43033155 43033196 -97283569 + (CA)n Simple_repeat Simple_repeat 2 42 0 201 308 0 0 chr10 43033569 43033647 -97283118 + (TA)n Simple_repeat Simple_repeat 2 79 0 668 177 24 0 chr10 43033707 43033831 -97282934 + FLAM_A SINE Alu 4 130 -3 2518 40 40 7 chr10 43033831 43034132 -97282633 + AluY SINE Alu 1 311 0 2464 90 0 0 chr10 43034161 43034460 -97282305 - AluSx SINE Alu -13 299 1 284 313 61 23 chr10 43034739 43034870 -97281895 - MIR SINE MIR -17 245 110 234 274 21 21 chr10 43035466 43035561 -97281204 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 * 261 194 0 16 chr10 43035501 43035563 -97281202 + GA-rich Low_complexity Low_complexity 2 62 0 304 327 121 22 chr10 43035761 43035984 -97280781 - HAL1 LINE L1 -2179 328 84 2497 78 7 0 chr10 43036041 43036349 -97280416 + AluSx SINE Alu 1 310 -2 647 213 24 0 chr10 43036360 43036487 -97280278 + FLAM_C SINE Alu 2 131 -12 358 277 42 8 chr10 43036834 43036953 -97279812 + MIR SINE MIR 21 143 -119 690 165 16 24 chr10 43036982 43037109 -97279656 + FLAM_C SINE Alu 1 126 -7 764 183 87 160 chr10 43038298 43038563 -97278202 + MER69 DNA AcHobo 1938 2142 -384 2250 93 0 48 chr10 43038563 43038873 -97277892 + AluSq SINE Alu 1 295 -18 764 183 87 160 chr10 43038873 43039170 -97277595 + MER69 DNA AcHobo 2142 2459 -67 986 142 65 0 chr10 43039170 43039325 -97277440 - AluSg/x SINE Alu -14 298 134 2060 121 17 7 chr10 43039325 43039622 -97277143 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 43040020 43040041 -97276724 + AT_rich Low_complexity Low_complexity 1 21 0 336 61 41 0 chr10 43041155 43041204 -97275561 + LTR54 LTR ERV1 4 54 -456 318 73 200 0 chr10 43041232 43041287 -97275478 + AluSp SINE Alu 54 119 -184 280 133 33 17 chr10 43041784 43041844 -97274921 - L1MCa LINE L1 -4304 2122 2062 2304 112 3 3 chr10 43042059 43042364 -97274401 - AluSx SINE Alu -7 305 1 607 179 0 0 chr10 43042366 43042472 -97274293 - MER34C LTR ERV1 -423 162 57 1806 140 35 0 chr10 43042472 43042757 -97274008 + LTR24 LTR ERV1 1 295 -172 706 253 0 0 chr10 43042757 43042923 -97273842 + FRAM SINE Alu 1 166 0 1696 151 35 0 chr10 43042926 43043227 -97273538 + MER34C LTR ERV1 151 465 -120 198 0 0 0 chr10 43043227 43043249 -97273516 + (TG)n Simple_repeat Simple_repeat 2 23 0 705 179 37 0 chr10 43043312 43043446 -97273319 + MER34C LTR ERV1 445 583 -2 348 296 51 14 chr10 43043774 43043990 -97272775 + L1ME3A LINE L1 5108 5331 -815 * 2954 136 19 8 chr10 43043961 43044492 -97272273 + L1MA8 LINE L1 5594 6130 -161 412 206 0 10 chr10 43044492 43044589 -97272176 + FLAM_A SINE Alu 34 129 -13 2459 87 0 3 chr10 43044591 43044901 -97271864 + AluY SINE Alu 1 309 -2 881 164 12 0 chr10 43044923 43045094 -97271671 + L1MA8 LINE L1 6115 6287 -4 1147 208 12 8 chr10 43045107 43045352 -97271413 + L1MB7 LINE L1 5865 6110 -74 448 269 12 25 chr10 43045358 43045518 -97271247 + L1ME3A LINE L1 5317 5474 -688 2049 195 67 34 chr10 43045554 43045816 -97270949 - MLT1D LTR MaLR 0 505 218 2009 156 13 3 chr10 43045816 43046123 -97270642 - AluJb SINE Alu -2 310 1 2049 195 67 34 chr10 43046123 43046338 -97270427 - MLT1D LTR MaLR -287 218 12 197 325 13 0 chr10 43046477 43046554 -97270211 + L2 LINE L2 2818 2895 -419 416 267 90 130 chr10 43046573 43047252 -97269513 + MER21B LTR ERV1 28 679 -184 427 250 38 65 chr10 43047447 43047631 -97269134 + L2 LINE L2 3101 3279 -34 375 240 8 71 chr10 43047631 43047757 -97269008 + L1ME3A LINE L1 5667 5784 -378 618 179 29 7 chr10 43047776 43047916 -97268849 - L1MA8 LINE L1 -3 6288 6146 1709 168 34 3 chr10 43047928 43048249 -97268516 - MER44D DNA MER2_type 0 609 9 463 251 43 89 chr10 43048258 43048493 -97268272 + L1ME3A LINE L1 5778 6001 -169 1757 165 3 62 chr10 43048719 43049077 -97267688 + MER1B DNA MER1_type 1 337 0 199 364 25 51 chr10 43049103 43049339 -97267426 - L2 LINE L2 -2159 1155 926 2365 92 0 3 chr10 43049768 43050061 -97266704 + AluSx SINE Alu 1 292 -20 1251 216 75 41 chr10 43050070 43050305 -97266460 - L1ME1 LINE L1 -18 6148 5892 2209 120 0 3 chr10 43050305 43050605 -97266160 + AluSg SINE Alu 1 299 -11 1251 216 75 41 chr10 43050605 43050780 -97265985 - L1ME1 LINE L1 -274 5892 5724 1637 282 79 38 chr10 43050790 43051748 -97265017 + L1M4 LINE L1 2538 3535 -2611 301 139 190 25 chr10 43051765 43051844 -97264921 + L1ME3A LINE L1 6075 6166 -4 1029 89 0 0 chr10 43051846 43051970 -97264795 + FRAM SINE Alu 37 160 -16 319 196 115 68 chr10 43052004 43052152 -97264613 + L1MC5 LINE L1 7773 7927 -34 491 235 214 22 chr10 43052156 43052474 -97264291 + L2 LINE L2 2698 3070 -243 853 217 12 0 chr10 43052494 43052660 -97264105 + FAM SINE Alu 8 175 -10 288 338 106 12 chr10 43052735 43052895 -97263870 + L2 LINE L2 3137 3311 -2 375 329 15 0 chr10 43053158 43053295 -97263470 + MIR SINE MIR 49 187 -75 2420 47 7 20 chr10 43053447 43053747 -97263018 - AluY SINE Alu -2 309 14 236 172 32 11 chr10 43053881 43053974 -97262791 + (CTCG)n Simple_repeat Simple_repeat 4 98 0 316 382 6 6 chr10 43055465 43055643 -97261122 + (CA)n Simple_repeat Simple_repeat 1 178 0 718 296 58 31 chr10 43058028 43058577 -97258188 - L1ME LINE L1 -367 5803 5237 267 103 0 0 chr10 43058619 43058658 -97258107 + (CA)n Simple_repeat Simple_repeat 2 40 0 389 202 73 18 chr10 43058665 43058774 -97257991 - L2 LINE L2 -25 3288 3174 201 244 0 0 chr10 43059043 43059088 -97257677 - L2 LINE L2 -598 2716 2672 2242 133 63 24 chr10 43059124 43059164 -97257601 - MSTA LTR MaLR 0 428 391 2357 106 3 3 chr10 43059164 43059465 -97257300 + AluSx SINE Alu 1 301 -11 2242 133 63 24 chr10 43059465 43059836 -97256929 - MSTA LTR MaLR -37 391 1 211 226 0 19 chr10 43061722 43061775 -97254990 + L3 LINE CR1 1430 1481 -96 236 260 24 47 chr10 43062019 43062146 -97254619 + C-rich Low_complexity Low_complexity 6 129 0 322 362 106 10 chr10 43063073 43063272 -97253493 - L2 LINE L2 -1 3312 3095 276 309 224 9 chr10 43063941 43064271 -97252494 - L2 LINE L2 -665 2649 2249 319 271 23 23 chr10 43064848 43064977 -97251788 + L2 LINE L2 2966 3094 -178 391 332 84 20 chr10 43065446 43065643 -97251122 + MIR SINE MIR 17 224 -38 190 288 175 12 chr10 43065966 43066046 -97250719 + MER5A DNA MER1_type 93 185 -4 304 275 33 0 chr10 43066066 43066157 -97250608 + MER5A DNA MER1_type 10 103 -86 1773 152 7 13 chr10 43066276 43066578 -97250187 + AluJo SINE Alu 1 300 -12 310 355 29 22 chr10 43066586 43066724 -97250041 - MER5B DNA MER1_type -4 174 36 203 267 17 0 chr10 43068941 43069001 -97247764 + (CA)n Simple_repeat Simple_repeat 1 61 0 1878 177 81 2 chr10 43069042 43069461 -97247304 + L1MA4A LINE L1 5852 6303 0 2097 109 0 16 chr10 43069710 43070014 -97246751 - AluSx SINE Alu -9 303 5 198 356 85 49 chr10 43071777 43072024 -97244741 - L2 LINE L2 -54 3259 3004 181 319 83 14 chr10 43073968 43074040 -97242725 - L3 LINE CR1 -210 1367 1291 1626 147 28 39 chr10 43076304 43076590 -97240175 + AluJo SINE Alu 1 283 -29 2040 133 0 3 chr10 43076590 43076883 -97239882 + AluSx SINE Alu 3 294 -18 247 281 90 11 chr10 43077511 43077600 -97239165 - MIR SINE MIR -117 145 50 1228 163 56 8 chr10 43078040 43078292 -97238473 - Tigger3(Golem) DNA MER2_type 0 3029 2766 7625 200 58 16 chr10 43078451 43079505 -97237260 + L1MB7 LINE L1 3139 4147 -2037 180 77 0 0 chr10 43079505 43079531 -97237234 + (CA)n Simple_repeat Simple_repeat 2 27 0 7625 200 58 16 chr10 43079531 43081270 -97235495 + L1MB7 LINE L1 4147 5811 -373 1473 144 107 38 chr10 43081270 43081561 -97235204 + AluSx SINE Alu 1 311 -1 2147 117 0 25 chr10 43081564 43081880 -97234885 + AluSx SINE Alu 1 308 -4 7625 200 58 16 chr10 43081880 43081987 -97234778 + L1MB7 LINE L1 5812 6165 -19 385 244 31 100 chr10 43082060 43082220 -97234545 - L1MC/D LINE L1 -2345 5463 5315 586 353 59 14 chr10 43082249 43082603 -97234162 - L2 LINE L2 0 3313 2944 251 336 60 0 chr10 43083519 43083635 -97233130 + MIR3 SINE MIR 62 184 -24 307 344 32 16 chr10 43083978 43084103 -97232662 + MER5A DNA MER1_type 57 183 -6 850 272 166 23 chr10 43086848 43087373 -97229392 + MLT1E2 LTR MaLR 14 613 -13 253 285 45 40 chr10 43089058 43089207 -97227558 - MIR SINE MIR -65 143 43 183 321 48 12 chr10 43090693 43090777 -97225988 + MIR SINE MIR 35 121 -141 469 285 68 10 chr10 43092937 43093144 -97223621 + LTR16A1 LTR ERVL 214 432 -25 437 274 124 27 chr10 43094285 43094471 -97222294 - L1M4 LINE L1 -3190 2956 2753 201 291 51 0 chr10 43096299 43096378 -97220387 - L2 LINE L2 -682 2632 2550 1341 98 0 0 chr10 43097875 43098073 -97218692 + AluSg/x SINE Alu 110 307 0 325 239 99 35 chr10 43098517 43098659 -97218106 + MIR3 SINE MIR 17 167 -41 194 348 43 0 chr10 43099419 43099488 -97217277 + L2 LINE L2 3199 3270 -2 1646 173 4 0 chr10 43100677 43100948 -97215817 + AluJb SINE Alu 40 311 -1 321 336 48 41 chr10 43101295 43101441 -97215324 + HAL1 LINE L1 854 1000 -1507 642 227 124 0 chr10 43101476 43101553 -97215212 + L1M4 LINE L1 4169 4235 -1911 192 40 0 0 chr10 43101553 43101578 -97215187 + (CA)n Simple_repeat Simple_repeat 2 26 0 642 227 124 0 chr10 43101578 43101694 -97215071 + L1M4 LINE L1 4235 4386 -1760 1717 187 80 46 chr10 43101696 43102134 -97214631 - MLT1C LTR MaLR -14 453 1 1339 158 117 4 chr10 43102181 43102428 -97214337 + AluJo SINE Alu 23 297 -15 1454 186 17 3 chr10 43102431 43102780 -97213985 + L1M4 LINE L1 4409 4762 -1384 1788 158 0 7 chr10 43102780 43103091 -97213674 + AluJb SINE Alu 3 311 0 827 214 23 12 chr10 43103114 43103287 -97213478 + FAM SINE Alu 1 175 0 637 314 44 41 chr10 43103289 43103528 -97213237 + L1ME LINE L1 2903 3145 -3001 1605 184 13 19 chr10 43103528 43103875 -97212890 + AluSx SINE Alu 1 312 0 637 314 44 41 chr10 43103875 43103954 -97212811 + L1ME LINE L1 3145 3222 -2924 813 337 154 16 chr10 43104221 43104794 -97211971 + L1ME LINE L1 4147 4798 -1348 1085 167 0 63 chr10 43104794 43105033 -97211732 + AluJo SINE Alu 85 308 -4 361 308 84 114 chr10 43105043 43105371 -97211394 + L1ME LINE L1 4783 5119 -1027 2142 116 0 0 chr10 43105371 43105663 -97211102 - AluSx SINE Alu -20 292 1 361 308 84 114 chr10 43105663 43105784 -97210981 + L1ME LINE L1 5119 5242 -904 1578 183 28 3 chr10 43105784 43106068 -97210697 + AluJo SINE Alu 11 301 -11 361 308 84 114 chr10 43106068 43106257 -97210508 + L1ME LINE L1 5242 5403 -743 229 228 18 0 chr10 43106323 43106380 -97210385 + L1ME LINE L1 5536 5593 -528 490 291 79 22 chr10 43106971 43107249 -97209516 - HsTC2 DNA Tc2 -278 1620 1151 269 281 52 0 chr10 43107450 43107546 -97209219 - MIR SINE MIR -141 121 21 1677 161 13 32 chr10 43109534 43109850 -97206915 - AluJo SINE Alu -2 310 1 1899 146 13 16 chr10 43110617 43110926 -97205839 + AluJb SINE Alu 1 308 -4 335 357 8 8 chr10 43110972 43111098 -97205667 - MIR SINE MIR -105 157 32 517 239 154 7 chr10 43111281 43111551 -97205214 + MLT1H1 LTR MaLR 8 283 -272 1235 155 21 0 chr10 43111572 43111759 -97205006 + AluJb SINE Alu 47 237 -75 342 264 118 81 chr10 43111796 43111984 -97204781 + L2 LINE L2 1706 1885 -1429 2143 121 0 0 chr10 43111984 43112273 -97204492 - AluSq SINE Alu -11 302 14 342 264 118 81 chr10 43112273 43112665 -97204100 + L2 LINE L2 1885 2280 -1034 1720 121 24 119 chr10 43112688 43113067 -97203698 - LTR3b LTR ERVK 0 500 158 519 32 0 0 chr10 43113092 43113155 -97203610 - HERVK14 LTR ERVK -61 5884 5822 367 145 0 16 chr10 43113155 43113217 -97203548 - MER41C LTR ERV1 -493 61 1 1268 86 23 0 chr10 43113217 43113391 -97203374 - HERVK22 LTR ERVK -186 5759 5582 1151 148 18 42 chr10 43113391 43113434 -97203331 - MER41C-int LTR ERV1 0 7756 7545 2583 127 43 20 chr10 43113436 43113944 -97202821 - HERVK22 LTR ERVK -373 5572 2995 * 3295 213 62 1 chr10 43113943 43114665 -97202100 - HERVK22 LTR ERVK -4934 2309 1544 1895 85 37 0 chr10 43114667 43114939 -97201826 - LTR22B LTR ERVK -210 282 1 22101 104 8 5 chr10 43114939 43118112 -97198653 - HERVK22 LTR ERVK 0 6837 3656 346 127 0 0 chr10 43118113 43118168 -97198597 - HERVK22 LTR ERVK -4293 2544 2490 * 528 100 38 0 chr10 43118157 43118237 -97198528 - HERVK22 LTR ERVK -3930 2907 2825 * 694 174 51 0 chr10 43118234 43118372 -97198393 - HERVK22 LTR ERVK -4366 2471 2327 275 0 0 28 chr10 43118783 43118819 -97197946 + (CCCCCG)n Simple_repeat Simple_repeat 1 35 0 4037 145 10 26 chr10 43118851 43119207 -97197558 - HERVK22 LTR ERVK -6143 694 352 2305 78 3 0 chr10 43119207 43119518 -97197247 + AluSp SINE Alu 1 312 0 4037 145 10 26 chr10 43119518 43119862 -97196903 - HERVK22 LTR ERVK -6485 352 4 3365 100 20 20 chr10 43119865 43120357 -97196408 - LTR22B LTR ERVK 0 492 1 621 241 6 6 chr10 43120358 43120516 -97196249 + MER33 DNA MER1_type 6 163 -161 1222 161 0 10 chr10 43120516 43120708 -97196057 + AluJo SINE Alu 1 190 -122 1635 88 104 4 chr10 43120719 43120968 -97195797 - LTR12 LTR ERV1 -440 274 1 682 83 0 0 chr10 43121355 43121439 -97195326 + AluS SINE Alu 2 85 -227 564 186 9 9 chr10 43222032 43222255 -97094510 + (TGGA)n Simple_repeat Simple_repeat 1 223 0 455 244 0 6 chr10 43222279 43222443 -97094322 + (TGGA)n Simple_repeat Simple_repeat 3 165 0 431 171 8 68 chr10 43223247 43223364 -97093401 - MER53 DNA DNA -7 182 73 282 197 28 0 chr10 43223392 43223463 -97093302 + MER53 DNA DNA 117 189 0 3326 180 51 40 chr10 43223989 43224397 -97092368 + MER21B LTR ERV1 1 403 -460 2303 94 0 0 chr10 43224397 43224696 -97092069 - AluSq SINE Alu -14 299 1 3326 180 51 40 chr10 43224696 43225094 -97091671 + MER21B LTR ERV1 403 851 -12 250 252 76 30 chr10 43226190 43226321 -97090444 + MER113 DNA MER1_type? 7 143 -378 26 74 0 0 chr10 43226361 43226415 -97090350 + AT_rich Low_complexity Low_complexity 1 54 0 2415 40 0 3 chr10 43226977 43227331 -97089434 - AluY SINE Alu 0 311 1 242 301 225 5 chr10 43227390 43227603 -97089162 + L2 LINE L2 3048 3307 -6 360 111 0 0 chr10 43228184 43228238 -97088527 + (TGGG)n Simple_repeat Simple_repeat 2 55 0 201 404 13 33 chr10 43228810 43228961 -97087804 - MIR SINE MIR -4 258 111 212 174 22 0 chr10 43229576 43229622 -97087143 + (CCCCG)n Simple_repeat Simple_repeat 2 48 0 237 65 0 0 chr10 43229709 43229740 -97087025 + (CCCG)n Simple_repeat Simple_repeat 4 34 0 189 0 0 0 chr10 43231503 43231524 -97085241 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 183 80 0 0 chr10 43232860 43232885 -97083880 + (A)n Simple_repeat Simple_repeat 1 25 0 218 369 27 9 chr10 43245415 43245526 -97071239 + MIR SINE MIR 34 146 -62 200 298 159 46 chr10 43246220 43246371 -97070394 - MER91A DNA MER1_type -13 183 16 2034 128 20 43 chr10 43246840 43247185 -97069580 - MER1B DNA MER1_type 0 337 1 1922 309 172 27 chr10 43247924 43248199 -97068566 + L2 LINE L2 1119 1353 -1960 1881 97 23 0 chr10 43248199 43248457 -97068308 + L1PA13 LINE L1 5900 6163 0 1922 309 172 27 chr10 43248457 43249174 -97067591 + L2 LINE L2 1353 1964 -1349 2439 83 0 0 chr10 43249174 43249486 -97067279 - AluSx SINE Alu 0 312 1 1922 309 172 27 chr10 43249486 43250397 -97066368 + L2 LINE L2 1964 3307 -6 253 292 31 21 chr10 43250986 43251082 -97065683 - MIR SINE MIR -151 111 15 228 35 0 0 chr10 43252360 43252389 -97064376 + (ATG)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr10 43255109 43255133 -97061632 + (A)n Simple_repeat Simple_repeat 1 24 0 285 295 53 0 chr10 43257122 43257217 -97059548 + MER5B DNA MER1_type 79 178 0 373 262 135 0 chr10 43257225 43257351 -97059414 - MER5A DNA MER1_type 0 189 47 183 167 0 0 chr10 43258341 43258383 -97058382 + GA-rich Low_complexity Low_complexity 1 42 0 186 255 0 0 chr10 43258384 43258435 -97058330 + (CA)n Simple_repeat Simple_repeat 2 52 0 258 32 0 0 chr10 43258768 43258799 -97057966 + (CA)n Simple_repeat Simple_repeat 1 31 0 252 143 0 0 chr10 43258943 43258985 -97057780 + (TG)n Simple_repeat Simple_repeat 1 42 0 482 210 0 20 chr10 43259643 43259743 -97057022 + LTR33 LTR ERVL 424 521 0 339 306 121 7 chr10 43260076 43260282 -97056483 + MIR SINE MIR 8 252 -10 271 347 41 12 chr10 43261321 43261491 -97055274 + L2 LINE L2 2683 2857 -457 276 337 12 18 chr10 43262418 43262587 -97054178 + GA-rich Low_complexity Low_complexity 2 169 0 1987 134 3 10 chr10 43263016 43263330 -97053435 + AluSx SINE Alu 1 312 0 853 68 54 7 chr10 43263367 43263515 -97053250 + GA-rich Low_complexity Low_complexity 2 156 0 327 277 1 0 chr10 43263561 43263661 -97053104 + MIR SINE MIR 86 185 -56 336 329 35 14 chr10 43263978 43264031 -97052734 - MIR SINE MIR -54 208 158 2273 172 31 13 chr10 43264031 43264420 -97052345 + MSTD LTR MaLR 1 396 0 336 329 35 14 chr10 43264420 43264509 -97052256 - MIR SINE MIR -104 158 63 282 290 55 82 chr10 43264762 43264945 -97051820 - MLT1K LTR MaLR -399 189 12 224 333 83 21 chr10 43265053 43265149 -97051616 + L2 LINE L2 3123 3224 -48 272 363 56 34 chr10 43265191 43265370 -97051395 - L2 LINE L2 -570 2744 2562 202 377 41 0 chr10 43268338 43268460 -97048305 - MIR SINE MIR -28 234 108 949 242 102 46 chr10 43268554 43268776 -97047989 + MER74B LTR ERVL 66 321 -301 1926 177 40 6 chr10 43268776 43269127 -97047638 + MLT1A1 LTR MaLR 3 365 0 949 242 102 46 chr10 43269127 43269296 -97047469 + MER74B LTR ERVL 321 479 -143 269 294 83 9 chr10 43270975 43271084 -97045681 - L3 LINE CR1 -758 819 703 1089 88 0 0 chr10 43271096 43271243 -97045522 + AluSg/x SINE Alu 166 312 0 799 278 63 27 chr10 43272430 43272761 -97044004 - MLT1G LTR MaLR 0 590 248 1856 212 35 0 chr10 43272782 43273142 -97043623 + MLT2D LTR ERVL 1 376 -38 396 0 0 0 chr10 43273142 43273186 -97043579 + (CA)n Simple_repeat Simple_repeat 2 45 0 1856 212 35 0 chr10 43273186 43273202 -97043563 + MLT2D LTR ERVL 376 390 -24 354 180 38 15 chr10 43273305 43273392 -97043373 - MLT1G LTR MaLR -468 90 1 593 247 197 22 chr10 43273956 43274255 -97042510 - MLT1G3 LTR MaLR -197 333 1 315 315 34 34 chr10 43274265 43274414 -97042351 - MIR SINE MIR -112 150 2 648 138 297 0 chr10 43274838 43274976 -97041789 + MER5A DNA MER1_type 4 182 -7 257 252 65 47 chr10 43275005 43275112 -97041653 - L2 LINE L2 -553 2761 2653 204 213 82 0 chr10 43275512 43275573 -97041192 + MIR SINE MIR 132 197 -65 267 221 176 0 chr10 43275642 43275710 -97041055 - L2 LINE L2 0 3272 3193 219 381 57 21 chr10 43275767 43275961 -97040804 + MIR SINE MIR 15 215 -47 1940 156 92 6 chr10 43277822 43278180 -97038585 - MLT1B LTR MaLR -1 389 1 328 235 227 8 chr10 43279297 43279429 -97037336 - MIR SINE MIR 0 262 102 451 234 11 0 chr10 43280888 43280982 -97035783 - Tigger7 DNA MER2_type 0 2487 2393 277 274 12 0 chr10 43280983 43281067 -97035698 - MLT1A1 LTR MaLR -202 163 79 * 767 268 49 5 chr10 43281054 43281259 -97035506 + MLT1A1 LTR MaLR 152 365 0 218 310 115 0 chr10 43282348 43282461 -97034304 + MIR SINE MIR 133 258 -4 265 303 64 18 chr10 43282957 43283066 -97033699 + MIR SINE MIR 34 147 -61 286 259 0 0 chr10 43283208 43283235 -97033530 + (TA)n Simple_repeat Simple_repeat 2 28 -58 1347 173 17 0 chr10 43283235 43283466 -97033299 + MER46A DNA MER2_type 1 235 -1 286 259 0 0 chr10 43283466 43283497 -97033268 + (TA)n Simple_repeat Simple_repeat 28 63 -23 2043 207 5 10 chr10 43283497 43283893 -97032872 + MSTD LTR MaLR 1 394 -2 286 259 0 0 chr10 43283893 43283918 -97032847 + (TA)n Simple_repeat Simple_repeat 62 86 0 250 240 0 0 chr10 43284002 43284052 -97032713 + MIR SINE MIR 71 120 -142 4934 220 54 63 chr10 43284211 43284642 -97032123 - L1MDa LINE L1 -2215 4325 3892 2004 129 0 3 chr10 43284642 43284936 -97031829 - AluSg SINE Alu -17 293 1 4934 220 54 63 chr10 43284936 43285216 -97031549 - L1MDa LINE L1 -2648 3892 3611 2386 110 33 36 chr10 43285216 43285581 -97031184 - THE1B LTR MaLR 0 364 1 4934 220 54 63 chr10 43285581 43286822 -97029943 - L1MDa LINE L1 -2929 3611 2390 282 314 34 57 chr10 43288091 43288266 -97028499 - L2 LINE L2 -345 2969 2799 205 243 0 0 chr10 43288829 43288866 -97027899 + polypyrimidine Low_complexity Low_complexity 3 39 0 232 304 37 12 chr10 43289394 43289505 -97027260 - MIR SINE MIR -60 148 72 186 290 28 84 chr10 43289638 43289745 -97027020 - L2 LINE L2 0 3313 3213 785 277 61 11 chr10 43289900 43290178 -97026587 - MLT1C LTR MaLR -4 463 172 1315 51 16 13 chr10 43290214 43290534 -97026231 + (TTTC)n Simple_repeat Simple_repeat 1 321 0 1539 178 22 0 chr10 43290541 43290811 -97025954 - AluJo SINE Alu -36 276 1 505 138 156 81 chr10 43290813 43290973 -97025792 - MLT1C LTR MaLR -292 175 4 357 323 68 16 chr10 43291260 43291452 -97025313 + MIR SINE MIR 37 238 -24 1615 124 12 20 chr10 43291865 43292099 -97024666 + MSTC LTR MaLR 1 234 -194 1345 119 25 30 chr10 43292099 43292334 -97024431 + L1MC1 LINE L1 6100 6333 0 1615 124 12 20 chr10 43292334 43292348 -97024417 + MSTC LTR MaLR 234 247 -181 3707 200 66 20 chr10 43293217 43293379 -97023386 - L1MB7 LINE L1 -121 6063 5910 378 0 0 0 chr10 43293379 43293421 -97023344 + (TA)n Simple_repeat Simple_repeat 2 43 0 3707 200 66 20 chr10 43293421 43294740 -97022025 - L1MB7 LINE L1 -274 5910 4491 1939 139 20 0 chr10 43294740 43295035 -97021730 - AluSx SINE Alu -11 301 1 3707 200 66 20 chr10 43295035 43295207 -97021558 - L1MB7 LINE L1 -1693 4491 4328 1947 136 47 6 chr10 43295217 43295534 -97021231 - MER44D DNA MER2_type -8 601 2 1112 250 31 12 chr10 43295547 43295867 -97020898 - L1MB7 LINE L1 -1831 4315 3990 304 260 0 50 chr10 43297925 43298106 -97018659 + G-rich Low_complexity Low_complexity 3 174 0 1173 89 0 0 chr10 43299153 43299310 -97017455 - AluSc SINE Alu -1 308 152 582 271 45 35 chr10 43299800 43299999 -97016766 - MIR SINE MIR -32 230 30 342 290 160 8 chr10 43300071 43300202 -97016563 + MIR SINE MIR 74 224 -38 295 274 89 57 chr10 43300202 43300326 -97016439 - MER96 DNA MER1_type? -1 174 47 1614 93 5 0 chr10 43301048 43301263 -97015502 - AluSx SINE Alu -94 218 3 241 326 109 27 chr10 43301363 43301510 -97015255 + MIR SINE MIR 36 194 -68 229 282 70 0 chr10 43301653 43301724 -97015041 - MIR3 SINE MIR -23 185 110 728 334 113 54 chr10 43302430 43303467 -97013298 + L3 LINE CR1 403 1500 -77 2706 170 45 12 chr10 43304766 43305259 -97011506 + MLT2B2 LTR ERVL 1 509 -6 260 169 0 17 chr10 43305263 43305322 -97011443 + CT-rich Low_complexity Low_complexity 4 61 0 2276 187 45 39 chr10 43306613 43307126 -97009639 + MER74A LTR ERVL 43 558 0 2287 154 49 7 chr10 43307639 43308049 -97008716 + MSTB1 LTR MaLR 6 432 0 34 42 0 0 chr10 43308984 43309032 -97007733 + AT_rich Low_complexity Low_complexity 1 48 0 262 157 71 0 chr10 43309032 43309102 -97007663 - L1MB3 LINE L1 -22 6161 6087 8452 162 37 49 chr10 43309119 43310142 -97006623 - L1MA4 LINE L1 -292 6008 4974 189 0 0 0 chr10 43310142 43310163 -97006602 + (ATTTG)n Simple_repeat Simple_repeat 3 23 0 8452 162 37 49 chr10 43310163 43310420 -97006345 - L1MA4 LINE L1 -1326 4974 4715 1903 164 16 39 chr10 43310420 43310804 -97005961 - THE1C LTR MaLR 0 375 1 8452 162 37 49 chr10 43310804 43312038 -97004727 - L1MA4 LINE L1 -1585 4715 3503 319 261 174 14 chr10 43312174 43312312 -97004453 - MIR SINE MIR -17 245 86 182 295 0 16 chr10 43313751 43313812 -97002953 - L2 LINE L2 0 3272 3213 2320 112 67 24 chr10 43314849 43315223 -97001542 + MLT1B LTR MaLR 1 390 0 390 330 28 69 chr10 43316003 43316466 -97000299 - L1M4 LINE L1 -758 5388 4945 395 322 86 46 chr10 43316735 43317340 -96999425 - L1M4 LINE L1 -1890 4256 3628 21 0 0 0 chr10 43318518 43318539 -96998226 + AT_rich Low_complexity Low_complexity 1 21 0 340 216 37 22 chr10 43318937 43319071 -96997694 + (TG)n Simple_repeat Simple_repeat 1 136 0 210 135 53 38 chr10 43319231 43319364 -96997401 + (TG)n Simple_repeat Simple_repeat 1 135 0 216 194 43 54 chr10 43319386 43319479 -96997286 + (GTGTG)n Simple_repeat Simple_repeat 1 92 0 270 223 29 14 chr10 43319517 43319656 -96997109 + (TG)n Simple_repeat Simple_repeat 1 141 0 1603 199 130 19 chr10 43319917 43320349 -96996416 - MER21B LTR ERV1 -9 854 375 210 246 29 41 chr10 43321585 43321756 -96995009 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 * 424 315 0 22 chr10 43321643 43321827 -96994938 + C-rich Low_complexity Low_complexity 1 180 0 209 270 40 27 chr10 43322461 43322535 -96994230 + MIR SINE MIR 175 249 -13 348 147 0 0 chr10 43322670 43322738 -96994027 - L1MB4 LINE L1 -2 6178 6111 1172 189 59 33 chr10 43322738 43323121 -96993644 - LTR29 LTR ERV1 -70 574 138 271 206 54 43 chr10 43323127 43323219 -96993546 - MER34 LTR ERV1 -449 93 1 4627 139 32 21 chr10 43323228 43324020 -96992745 - MER34-int LTR ERV1 -8 6323 5524 2647 165 119 43 chr10 43324011 43324968 -96991797 - LTR49-int LTR ERV1 -1866 4784 2189 * 314 203 73 65 chr10 43324936 43325059 -96991706 - LTR49-int LTR ERV1 -2698 3633 3510 * 2100 222 108 45 chr10 43325062 43325746 -96991019 + MER50 LTR ERV1 8 734 0 2706 203 86 44 chr10 43325751 43326573 -96990192 - LTR49-int LTR ERV1 -3042 2081 1225 537 301 146 13 chr10 43326573 43326812 -96989953 - MER34C LTR ERV1 -155 430 160 4273 211 50 44 chr10 43326814 43327961 -96988804 - LTR49-int LTR ERV1 -3683 2648 754 1102 146 50 59 chr10 43328664 43329057 -96987708 - LTR23 LTR ERV1 0 437 1 1893 198 12 6 chr10 43329057 43329400 -96987365 - MER21B LTR ERV1 -485 378 34 1539 149 60 37 chr10 43329414 43329772 -96986993 - Tigger3(Golem) DNA MER2_type -9 3020 1 439 288 152 16 chr10 43330990 43331342 -96985423 - L1MC/D LINE L1 -527 5594 5290 250 260 181 11 chr10 43332333 43332510 -96984255 + MIR SINE MIR 56 262 0 227 330 157 17 chr10 43334548 43334778 -96981987 + L1MC/D LINE L1 5522 5783 -2025 21 0 0 0 chr10 43335371 43335392 -96981373 + AT_rich Low_complexity Low_complexity 1 21 0 11230 88 6 0 chr10 43336378 43336709 -96980056 - L1PA7 LINE L1 -3 6151 5823 2398 83 0 0 chr10 43336709 43337011 -96979754 + AluY SINE Alu 1 302 -9 11230 88 6 0 chr10 43337011 43339005 -96977760 - L1PA7 LINE L1 -331 5823 3833 5399 104 6 59 chr10 43339005 43339892 -96976873 - L1PA7 LINE L1 -3604 2542 1703 189 0 0 0 chr10 43339892 43339913 -96976852 + (T)n Simple_repeat Simple_repeat 1 21 0 329 247 28 28 chr10 43339913 43340095 -96976670 + L1MD2 LINE L1 5043 5224 -922 313 211 90 64 chr10 43340121 43340277 -96976488 + L1MD2 LINE L1 5256 5415 -2393 45111 40 0 1 chr10 43340279 43346433 -96970332 - L1PA3 LINE L1 0 6155 7 6455 110 13 14 chr10 43346436 43347618 -96969147 - L1P3 LINE L1 -4423 2038 856 1044 210 15 10 chr10 43347620 43347825 -96968940 - AluJo SINE Alu -19 293 88 762 246 118 57 chr10 43348254 43348694 -96968071 - MLT1C LTR MaLR 0 467 1 461 258 67 27 chr10 43348999 43349164 -96967601 + MIR SINE MIR 34 204 -58 1946 107 11 18 chr10 43349646 43349918 -96966847 + AluSx SINE Alu 34 303 -9 481 245 88 7 chr10 43351189 43351335 -96965430 + MLT1F1 LTR MaLR 1 158 -409 2049 230 157 0 chr10 43351335 43351891 -96964874 - MLT1E1 LTR MaLR 0 654 12 1756 216 14 6 chr10 43351895 43352261 -96964504 + MLT1F1 LTR MaLR 199 567 0 650 203 52 0 chr10 43354546 43354699 -96962066 + MIR SINE MIR 64 224 -38 1872 175 25 28 chr10 43355561 43355915 -96960850 - MLT1A1 LTR MaLR 0 365 13 1360 192 98 1 chr10 43355996 43356313 -96960452 + L1MD2 LINE L1 5986 6359 0 186 43 0 0 chr10 43357347 43357370 -96959395 + (TG)n Simple_repeat Simple_repeat 1 23 0 2134 93 0 0 chr10 43358592 43358860 -96957905 - AluSg SINE Alu -9 301 34 3304 127 10 4 chr10 43359684 43360198 -96956567 - L1PB1 LINE L1 0 6151 5635 6946 69 9 7 chr10 43361183 43362296 -96954469 + L1PA8 LINE L1 5058 6172 0 201 366 65 0 chr10 43362354 43362477 -96954288 + MIR SINE MIR 23 153 -109 273 306 109 11 chr10 43362530 43362713 -96954052 - MIR SINE MIR -8 254 54 212 318 163 23 chr10 43363301 43363430 -96953335 - MIR SINE MIR -70 192 46 215 271 117 75 chr10 43363869 43364057 -96952708 + L2 LINE L2 3118 3313 0 354 61 0 0 chr10 43364264 43364313 -96952452 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 6572 97 22 4 chr10 43364381 43365309 -96951456 + L1PA7 LINE L1 1 944 -5517 18683 95 28 0 chr10 43365309 43368573 -96948192 + L1PA7 LINE L1 3167 6458 -11 415 158 32 42 chr10 43368574 43368669 -96948096 - L1MA4A LINE L1 0 6303 6210 1662 165 52 13 chr10 43369124 43369433 -96947332 + L1MB2 LINE L1 5848 6168 -3 336 266 73 0 chr10 43369534 43369658 -96947107 - MER94 DNA DNA 0 134 2 366 345 62 11 chr10 43369768 43369945 -96946820 + L2 LINE L2 3079 3264 -8 318 50 0 0 chr10 43370158 43370198 -96946567 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 285 227 64 0 chr10 43370876 43370986 -96945779 - L1M4 LINE L1 -2915 3231 3115 265 219 24 61 chr10 43373489 43373571 -96943194 + L2 LINE L2 3193 3271 -1 205 282 165 12 chr10 43373723 43373808 -96942957 + MIR SINE MIR 113 210 -52 1990 173 36 0 chr10 43374433 43374769 -96941996 - MER7A DNA MER2_type 0 346 1 604 234 42 26 chr10 43375357 43375549 -96941216 + L1ME3 LINE L1 5959 6153 -9 2715 19 7 3 chr10 43375574 43375883 -96940882 + AluY SINE Alu 1 310 -1 265 221 39 0 chr10 43375983 43376060 -96940705 - MER94 DNA DNA 0 134 55 548 299 69 14 chr10 43376886 43377103 -96939662 + MIR SINE MIR 28 256 -6 284 197 17 34 chr10 43377131 43377248 -96939517 + CT-rich Low_complexity Low_complexity 4 118 0 2143 103 7 3 chr10 43378354 43378644 -96938121 - AluSx SINE Alu -21 291 1 243 286 161 12 chr10 43378753 43378885 -96937880 + MIR SINE MIR 11 150 -69 1246 106 0 0 chr10 43379427 43379597 -96937168 + L1MA2 LINE L1 6134 6303 -1 25803 136 20 20 chr10 43380435 43380516 -96936249 + L1PA8A LINE L1 1 80 -6366 344 95 0 16 chr10 43380516 43380579 -96936186 + (TAA)n Simple_repeat Simple_repeat 2 63 0 25803 136 20 20 chr10 43380579 43382035 -96934730 + L1PA8A LINE L1 80 1534 -4912 2004 145 30 0 chr10 43382035 43382338 -96934427 + AluSq SINE Alu 1 312 -1 25803 136 20 20 chr10 43382338 43385649 -96931116 + L1PA8A LINE L1 1534 4842 -1604 252 0 0 0 chr10 43385649 43385677 -96931088 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 7267 66 11 1 chr10 43385677 43387239 -96929526 - L1PA7 LINE L1 -12 6142 4572 25803 136 20 20 chr10 43387239 43388739 -96928026 + L1PA8A LINE L1 4841 6418 -28 508 216 96 12 chr10 43389262 43389429 -96927336 - L1ME3A LINE L1 -5 6559 6379 889 278 25 7 chr10 43389435 43389716 -96927049 - L1ME3A LINE L1 -252 6312 6027 583 283 89 38 chr10 43389728 43390548 -96926217 - L1ME3A LINE L1 -691 5873 5016 467 266 49 60 chr10 43390605 43390954 -96925811 - L1ME3A LINE L1 -2451 4089 3745 459 192 55 55 chr10 43391073 43391219 -96925546 - L1MD3 LINE L1 -14 7981 7836 8192 13 0 1 chr10 43391320 43392613 -96924152 + L1HS LINE L1 4864 6155 0 1019 182 73 5 chr10 43392614 43392834 -96923931 - L1ME3A LINE L1 -4269 2271 2037 * 3499 202 67 57 chr10 43392809 43393845 -96922920 - L1ME3A LINE L1 -4707 1833 788 * 13482 170 25 23 chr10 43393842 43394684 -96922081 - L1M2 LINE L1 -743 5291 4452 189 0 0 0 chr10 43394684 43394705 -96922060 + (TG)n Simple_repeat Simple_repeat 2 22 0 13482 170 25 23 chr10 43394705 43396749 -96920016 - L1M2 LINE L1 -1582 4452 2526 919 350 2 28 chr10 43397152 43397581 -96919184 - L1M2 LINE L1 -5537 418 1 258 242 15 0 chr10 43397583 43397649 -96919116 - L1MEc LINE L1 -3844 2371 2305 415 289 44 93 chr10 43397686 43398094 -96918671 - L1MEc LINE L1 -4094 2302 1915 520 272 98 43 chr10 43398214 43398337 -96918428 - L1MEc LINE L1 -4703 1693 1578 2188 143 42 22 chr10 43398337 43398694 -96918071 - THE1B LTR MaLR 0 364 1 12143 96 9 13 chr10 43398694 43400278 -96916487 - THE1B-int LTR MaLR 0 1580 3 2424 138 8 22 chr10 43400279 43400648 -96916117 - THE1B LTR MaLR 0 364 1 520 272 98 43 chr10 43400648 43400962 -96915803 - L1MEc LINE L1 -4817 1579 1229 308 212 109 36 chr10 43401163 43401300 -96915465 - L1MEc LINE L1 -5028 1177 1031 180 0 0 0 chr10 43401825 43401845 -96914920 + (T)n Simple_repeat Simple_repeat 1 20 0 302 285 15 110 chr10 43401975 43402175 -96914590 - L1MEc LINE L1 -6194 202 22 749 334 9 30 chr10 43402471 43402809 -96913956 - L2 LINE L2 -1232 2082 1752 361 265 11 22 chr10 43403370 43403444 -96913321 + (TA)n Simple_repeat Simple_repeat 2 75 -105 1904 178 23 26 chr10 43403444 43403786 -96912979 + MER2 DNA MER2_type 2 342 -2 361 265 11 22 chr10 43403786 43403892 -96912873 + (TA)n Simple_repeat Simple_repeat 75 180 0 678 198 28 23 chr10 43404459 43404636 -96912129 - MER45R DNA AcHobo 0 1581 1404 761 208 73 0 chr10 43404767 43404945 -96911820 - MER45 DNA AcHobo -1387 194 4 190 276 17 17 chr10 43405109 43405167 -96911598 + MIR SINE MIR 87 144 -64 1189 186 5 14 chr10 43405693 43405908 -96910857 + MLT2B3 LTR ERVL 1 213 -341 2058 119 3 3 chr10 43456215 43456508 -96860257 + AluSq SINE Alu 1 293 -20 410 228 184 29 chr10 43457255 43457527 -96859238 - L1MC4a LINE L1 -1636 6172 5859 2555 96 151 137 chr10 43457645 43458438 -96858327 - LTR12 LTR ERV1 -5 709 1 263 234 52 26 chr10 43458543 43458620 -96858145 - LTR50 LTR ERVL -7 788 710 381 235 93 6 chr10 43459025 43459187 -96857578 - LTR50 LTR ERVL -619 176 1 268 247 84 60 chr10 43459478 43459644 -96857121 - L1 LINE L1 -2607 3539 3370 333 286 80 30 chr10 43459721 43459920 -96856845 - L1 LINE L1 -2867 3279 3071 302 266 84 26 chr10 43460149 43460303 -96856462 - L1 LINE L1 -3840 2306 2144 3509 242 87 17 chr10 43460714 43461924 -96854841 - L1M4 LINE L1 -790 5356 4063 1062 230 77 30 chr10 43462042 43462534 -96854231 - L1M4 LINE L1 -2852 3294 2780 2738 116 57 7 chr10 43462556 43462996 -96853769 - L1PB3 LINE L1 -9 6145 5684 5398 172 33 6 chr10 43462996 43464884 -96851881 + L1PA16 LINE L1 4127 6062 -104 427 77 15 0 chr10 43464886 43464951 -96851814 + L1PA16 LINE L1 6100 6165 -1 1945 97 3 7 chr10 43465110 43465400 -96851365 - L1P5 LINE L1 -538 5616 5328 822 236 24 4 chr10 43465403 43465885 -96850880 - L1M4 LINE L1 -3362 2784 2256 679 272 45 4 chr10 43465887 43466130 -96850635 - L1M4 LINE L1 -3644 2502 2250 5090 193 17 16 chr10 43466175 43467509 -96849256 - L1MA9 LINE L1 -38 6274 4933 387 103 0 0 chr10 43467510 43467568 -96849197 - L1P LINE L1 -769 5385 5328 1365 205 82 31 chr10 43467743 43468099 -96848666 + MSTD LTR MaLR 23 396 0 21 0 0 0 chr10 43468205 43468226 -96848539 + AT_rich Low_complexity Low_complexity 1 21 0 1158 198 51 26 chr10 43468262 43468535 -96848230 - L1ME1 LINE L1 -97 6069 5790 985 288 32 0 chr10 43468535 43468813 -96847952 + MLT1H1 LTR MaLR 269 555 0 540 316 21 11 chr10 43469322 43469512 -96847253 + MIR SINE MIR 23 214 -48 536 319 131 27 chr10 43469577 43470239 -96846526 - L2 LINE L2 -373 2941 2211 372 248 83 51 chr10 43470243 43470400 -96846365 - MLT1J2 LTR MaLR 0 450 289 422 264 54 31 chr10 43470440 43470569 -96846196 - MLT1J2 LTR MaLR -307 143 12 426 292 153 43 chr10 43470594 43471125 -96845640 - L2 LINE L2 -1120 2194 1606 25 0 0 0 chr10 43472018 43472043 -96844722 + AT_rich Low_complexity Low_complexity 1 25 0 720 194 16 0 chr10 43472043 43472167 -96844598 - FLAM_C SINE Alu -16 127 2 2336 139 31 0 chr10 43472303 43472656 -96844109 + THE1B LTR MaLR 1 364 0 387 245 28 28 chr10 43473257 43473400 -96843365 + (CATATA)n Simple_repeat Simple_repeat 2 144 0 197 109 0 65 chr10 43473442 43473488 -96843277 - L2 LINE L2 -5 3308 3266 513 281 24 11 chr10 43473770 43473959 -96842806 + MIR SINE MIR 50 239 -23 292 302 69 39 chr10 43474815 43474888 -96841877 - L2 LINE L2 -19 3294 3225 939 187 0 18 chr10 43474888 43475059 -96841706 + FAM SINE Alu 1 168 -7 292 302 69 39 chr10 43475059 43475319 -96841446 - L2 LINE L2 -88 3225 2951 748 305 66 37 chr10 43475452 43475812 -96840953 - L2 LINE L2 -552 2762 2375 2232 100 0 13 chr10 43475812 43476122 -96840643 - AluSc SINE Alu -3 306 1 748 305 66 37 chr10 43476122 43476380 -96840385 - L2 LINE L2 -939 2375 2126 3524 145 9 35 chr10 43478515 43479165 -96837600 - L1MB3 LINE L1 0 6183 5551 290 316 0 0 chr10 43480865 43480963 -96835802 + MIR SINE MIR 49 146 -116 33 25 0 0 chr10 43481264 43481304 -96835461 + AT_rich Low_complexity Low_complexity 1 40 0 209 375 19 0 chr10 43482109 43482213 -96834552 + T-rich Low_complexity Low_complexity 4 109 0 1849 202 116 37 chr10 43482940 43483451 -96833314 + MER77 LTR ERV1 51 601 -4 2238 80 0 58 chr10 43485033 43485346 -96831419 - AluSg SINE Alu -15 295 1 330 279 78 16 chr10 43485607 43485736 -96831029 - MIR SINE MIR -34 228 92 210 319 121 0 chr10 43486308 43486424 -96830341 - MIR SINE MIR -3 259 130 906 256 43 4 chr10 43486426 43486684 -96830081 + L1MEc LINE L1 39 306 -6090 * 1485 211 141 141 chr10 43486673 43487960 -96828805 + L1MEc LINE L1 820 2107 -4289 383 261 97 41 chr10 43488833 43489028 -96827737 - L2 LINE L2 -1 3312 3107 1937 140 71 24 chr10 43489119 43489497 -96827268 + MSTB1 LTR MaLR 2 397 -35 258 256 26 0 chr10 43489635 43489713 -96827052 + MSTB1 LTR MaLR 351 430 -2 4988 43 0 3 chr10 43490014 43490621 -96826144 + L1P LINE L1 1494 2098 -4048 2331 103 0 0 chr10 43490857 43491159 -96825606 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr10 43491400 43491430 -96825335 + AT_rich Low_complexity Low_complexity 1 30 0 489 207 41 35 chr10 43491824 43491969 -96824796 + L1MB8 LINE L1 6018 6163 -15 1190 271 52 20 chr10 43491984 43492431 -96824334 - L2 LINE L2 -385 2929 2469 1953 197 64 12 chr10 43492432 43492944 -96823821 + L1ME LINE L1 5144 5677 -489 775 349 37 25 chr10 43493051 43493484 -96823281 - HERV16 LTR ERVL -4557 439 2 632 281 168 54 chr10 43493485 43493895 -96822870 - LTR16A LTR ERVL 0 457 1 261 167 0 0 chr10 43494371 43494425 -96822340 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 298 260 40 10 chr10 43494439 43494539 -96822226 - MIR SINE MIR -69 193 91 815 227 0 5 chr10 43495641 43495826 -96820939 - MER53 DNA DNA -5 184 1 192 269 19 0 chr10 43496175 43496227 -96820538 + MIR SINE MIR 70 122 -140 434 310 153 11 chr10 43496240 43496521 -96820244 - L2 LINE L2 -5 3308 2988 1005 167 23 37 chr10 43496535 43496750 -96820015 + MER74A LTR ERVL 1 212 -346 2508 295 71 81 chr10 43496772 43498933 -96817832 - L1MDa LINE L1 -1896 4644 2505 1767 52 0 0 chr10 43499060 43499271 -96817494 - L1PA4 LINE L1 -450 5705 5495 3277 61 0 16 chr10 43499271 43499690 -96817075 + L1PA4 LINE L1 5736 6155 0 183 80 0 0 chr10 43499980 43500005 -96816760 + (TCC)n Simple_repeat Simple_repeat 3 27 0 1027 158 78 39 chr10 43500134 43500395 -96816370 - L1MDa LINE L1 -4055 2485 2211 1509 205 98 10 chr10 43500395 43500781 -96815984 - LTR52 LTR ERVL -1 420 1 1027 158 78 39 chr10 43500781 43500803 -96815962 - L1MDa LINE L1 -4329 2211 2191 872 261 52 29 chr10 43500818 43501376 -96815389 - L1M4c LINE L1 -4235 2590 1857 1895 128 0 0 chr10 43501992 43502249 -96814516 + AluSc SINE Alu 1 257 -52 1318 80 0 8 chr10 43502335 43502607 -96814158 + (TTC)n Simple_repeat Simple_repeat 1 269 0 2852 201 65 20 chr10 43504309 43505194 -96811571 - L1M4c LINE L1 -4774 1872 954 1342 231 132 38 chr10 43508284 43508863 -96807902 + MLT1E3 LTR MaLR 2 615 -9 450 266 0 0 chr10 43509023 43509749 -96807016 + (CA)n Simple_repeat Simple_repeat 1 726 0 1981 154 45 28 chr10 43510774 43511132 -96805633 - THE1B LTR MaLR 0 364 1 350 264 107 28 chr10 43511380 43511596 -96805169 - L1MC4a LINE L1 -1877 5931 5699 510 277 111 30 chr10 43511651 43511922 -96804843 - L1MC4a LINE L1 -2225 5583 5291 389 259 52 93 chr10 43513277 43513325 -96803440 - MIR SINE MIR -21 241 193 3415 61 9 5 chr10 43513325 43513767 -96802998 - L1PA6 LINE L1 0 6154 5711 389 259 52 93 chr10 43513767 43513911 -96802854 - MIR SINE MIR -69 193 57 1832 138 11 4 chr10 43513984 43514260 -96802505 + AluSx SINE Alu 1 278 -34 2121 205 13 4 chr10 43514370 43514839 -96801926 - L1 LINE L1 -1422 4724 4252 1494 228 65 73 chr10 43514818 43515542 -96801223 - L1MEc LINE L1 -4068 2495 1778 * 339 216 72 0 chr10 43515561 43515700 -96801065 + L1MEc LINE L1 2098 2246 -4150 647 312 42 23 chr10 43515793 43516178 -96800587 - L1MEc LINE L1 -4814 1570 1179 794 175 113 46 chr10 43516356 43516596 -96800169 - L1MC5 LINE L1 -498 7463 7208 315 330 38 29 chr10 43516636 43516845 -96799920 - HAL1b LINE L1 -744 604 394 2124 95 14 3 chr10 43517150 43517444 -96799321 - AluSx SINE Alu -15 297 1 339 317 69 90 chr10 43520212 43520647 -96796118 + HAL1 LINE L1 1152 1577 -930 250 316 171 36 chr10 43520926 43521019 -96795746 - L2 LINE L2 -41 3272 3193 2054 126 0 3 chr10 43521019 43521320 -96795445 - AluSx SINE Alu -12 300 1 250 316 171 36 chr10 43521320 43521530 -96795235 - L2 LINE L2 -120 3193 2928 224 305 21 0 chr10 43521892 43521987 -96794778 - L2 LINE L2 -1160 2154 2058 2008 114 21 0 chr10 43522036 43522326 -96794439 - AluSx SINE Alu -16 296 1 347 321 32 62 chr10 43522341 43522649 -96794116 - MLT1J LTR MaLR -4 507 209 264 275 29 0 chr10 43523731 43523800 -96792965 - L2 LINE L2 -1 3271 3201 405 0 0 0 chr10 43523805 43523850 -96792915 + (ATG)n Simple_repeat Simple_repeat 2 46 0 292 248 0 40 chr10 43523881 43523982 -96792783 - L1M4 LINE L1 -344 5830 5734 585 245 57 36 chr10 43523982 43524174 -96792591 - MIR SINE MIR -45 217 22 382 267 169 29 chr10 43526430 43526824 -96789941 + L2 LINE L2 2725 3216 -97 1055 220 36 12 chr10 43526825 43527075 -96789690 - L1PA15 LINE L1 0 6165 5910 237 272 109 14 chr10 43527352 43527499 -96789266 - L1ME4a LINE L1 0 6121 5961 253 287 9 35 chr10 43529978 43530093 -96786672 + L1ME LINE L1 5789 5900 -221 476 283 44 56 chr10 43531639 43531819 -96784946 + MER5B DNA MER1_type 1 178 0 617 316 83 4 chr10 43533857 43534085 -96782680 + MIR SINE MIR 17 262 0 223 245 0 0 chr10 43534085 43534138 -96782627 + (CTA)n Simple_repeat Simple_repeat 3 55 0 259 275 116 38 chr10 43534302 43534469 -96782296 - MLT1K LTR MaLR 0 588 435 2803 221 34 53 chr10 43535354 43536068 -96780697 - L1M4 LINE L1 -5838 704 5 2878 146 75 18 chr10 43536085 43536695 -96780070 - L1MDa LINE L1 -4358 2182 1538 608 331 112 55 chr10 43536704 43536957 -96779808 - L1M4 LINE L1 -2324 3822 3585 2165 96 0 7 chr10 43536957 43537250 -96779515 - AluY SINE Alu -20 291 1 608 331 112 55 chr10 43537250 43537355 -96779410 - L1M4 LINE L1 -2561 3585 3487 2144 186 3 6 chr10 43537355 43537721 -96779044 - MLT1A1 LTR MaLR 0 365 1 608 331 112 55 chr10 43537721 43538056 -96778709 - L1M4 LINE L1 -2659 3487 3088 1221 176 159 32 chr10 43539037 43539440 -96777325 + Charlie2 DNA MER1_type 1910 2363 -499 40813 42 2 0 chr10 43539448 43545153 -96771612 - L1PA4 LINE L1 -1 6154 438 504 86 0 0 chr10 43545255 43545325 -96771440 + (TA)n Simple_repeat Simple_repeat 2 71 0 1887 138 0 10 chr10 43545325 43545616 -96771149 - AluSx SINE Alu -24 288 1 474 228 114 34 chr10 43545616 43545853 -96770912 + Charlie2 DNA MER1_type 2604 2859 -3 247 237 0 0 chr10 43546221 43546280 -96770485 + Charlie8 DNA MER1_type 1 59 -2358 1568 172 130 70 chr10 43547170 43547393 -96769372 + L1MB2 LINE L1 5690 5898 -273 2169 100 13 0 chr10 43547393 43547692 -96769073 + AluSx SINE Alu 1 303 -9 1568 172 130 70 chr10 43547692 43547922 -96768843 + L1MB2 LINE L1 5898 6170 -1 297 286 57 9 chr10 43548028 43548133 -96768632 + L3 LINE CR1 1294 1403 -174 229 262 202 0 chr10 43548120 43548204 -96768561 - L2 LINE L2 -1 3271 3171 * 1194 254 118 17 chr10 43548504 43548972 -96767793 + L1MD3 LINE L1 7481 7995 0 1682 183 7 0 chr10 43548987 43549282 -96767483 + AluJb SINE Alu 13 309 -3 341 281 38 30 chr10 43554632 43554913 -96761852 + L2 LINE L2 2635 2989 -324 367 331 76 62 chr10 43555194 43555469 -96761296 - L2 LINE L2 0 3272 2994 304 298 33 112 chr10 43555526 43555945 -96760820 - L2 LINE L2 -899 2415 2030 308 200 0 0 chr10 43555963 43556023 -96760742 + L1MC4 LINE L1 7981 8040 -2 785 261 111 40 chr10 43556401 43556753 -96760012 - MLT1I LTR MaLR 0 409 33 229 238 63 16 chr10 43556812 43556875 -96759890 + MLT1L LTR MaLR 1 66 -549 360 273 150 42 chr10 43557050 43557310 -96759455 + MLT1J LTR MaLR 224 511 0 237 109 0 0 chr10 43558743 43558789 -96757976 - LTR66 LTR ERVL -171 439 394 299 163 12 0 chr10 43558789 43558869 -96757896 + (TA)n Simple_repeat Simple_repeat 1 81 0 361 293 5 48 chr10 43560567 43560755 -96756010 + (CCA)n Simple_repeat Simple_repeat 1 180 0 186 293 170 44 chr10 43561950 43562179 -96754586 + L2 LINE L2 3014 3271 -1 2244 61 41 0 chr10 43562733 43563026 -96753739 + AluY SINE Alu 1 305 -6 258 32 0 0 chr10 43564695 43564726 -96752039 + (CA)n Simple_repeat Simple_repeat 2 32 0 491 352 40 28 chr10 43564929 43565176 -96751589 + MIR SINE MIR 4 253 -9 2132 117 7 0 chr10 43565846 43566145 -96750620 - AluSq SINE Alu -12 301 1 224 341 95 14 chr10 43566157 43566322 -96750443 - MIR SINE MIR -69 139 5 26 50 0 0 chr10 43567034 43567074 -96749691 + AT_rich Low_complexity Low_complexity 1 40 0 2180 99 20 16 chr10 43567125 43567428 -96749337 + AluSx SINE Alu 1 304 -8 958 240 125 29 chr10 43567524 43568012 -96748753 - L1MC5 LINE L1 -167 7794 7260 1401 249 127 74 chr10 43568142 43568788 -96747977 - L1MC5 LINE L1 -733 7228 6618 1660 142 12 50 chr10 43568788 43569111 -96747654 - AluJb SINE Alu -1 311 1 1401 249 127 74 chr10 43569111 43569229 -96747536 - L1MC5 LINE L1 -1343 6618 6508 249 57 0 0 chr10 43569229 43569264 -96747501 + (TG)n Simple_repeat Simple_repeat 2 36 0 1401 249 127 74 chr10 43569264 43569990 -96746775 - L1MC5 LINE L1 -1453 6508 5674 378 333 129 23 chr10 43570065 43571189 -96745576 - L2 LINE L2 -2 3311 2074 1226 277 51 20 chr10 43571553 43571947 -96744818 + MLT1I LTR MaLR 3 408 -1 436 291 52 43 chr10 43573801 43574011 -96742754 + MIR SINE MIR 51 262 0 1382 189 166 0 chr10 43574048 43574361 -96742404 - MLT1A1 LTR MaLR 0 365 1 246 32 0 0 chr10 43575350 43575381 -96741384 + (TA)n Simple_repeat Simple_repeat 2 32 0 272 329 37 19 chr10 43576208 43576369 -96740396 + L1M4 LINE L1 4536 4699 -1447 22 35 0 0 chr10 43576834 43576863 -96739902 + AT_rich Low_complexity Low_complexity 1 29 0 385 268 86 19 chr10 43576973 43577325 -96739440 + LTR16A LTR ERVL 23 444 -6 1136 227 25 49 chr10 43577598 43577630 -96739135 - MLT2B1 LTR ERVL 0 414 383 393 22 0 0 chr10 43577630 43577676 -96739089 + (TG)n Simple_repeat Simple_repeat 2 47 0 1768 161 7 27 chr10 43577684 43577983 -96738782 - AluJo SINE Alu -19 293 1 1136 227 25 49 chr10 43577983 43578373 -96738392 - MLT2B1 LTR ERVL -38 376 4 281 263 64 53 chr10 43579600 43579771 -96736994 - HAL1b LINE L1 -7 1341 1169 29 28 0 0 chr10 43579901 43579937 -96736828 + AT_rich Low_complexity Low_complexity 1 36 0 287 331 53 0 chr10 43579940 43580073 -96736692 - L1MC/D LINE L1 -1997 5811 5672 249 33 0 0 chr10 43581858 43581888 -96734877 + (TG)n Simple_repeat Simple_repeat 1 30 0 352 281 36 31 chr10 43582108 43582309 -96734456 + L1MEc LINE L1 2262 2455 -4085 276 295 73 43 chr10 43582847 43583081 -96733684 + HAL1b LINE L1 192 432 -916 404 41 0 0 chr10 43583270 43583319 -96733446 - MLT2A1 LTR ERVL 0 444 396 711 76 0 0 chr10 43583401 43583493 -96733272 + MLT2A1 LTR ERVL 1 92 -352 * 3172 66 0 8 chr10 43583490 43583883 -96732882 - MLT2A1 LTR ERVL -54 390 1 253 332 93 22 chr10 43583925 43584151 -96732614 + L1MC4a LINE L1 5675 5916 -1892 249 295 75 46 chr10 43584656 43584682 -96732083 - L1MB1 LINE L1 -219 5949 5924 369 321 54 32 chr10 43584682 43584959 -96731806 - L1ME3A LINE L1 -243 5927 5645 345 294 22 15 chr10 43584975 43585111 -96731654 + (TATATG)n Simple_repeat Simple_repeat 4 140 0 253 211 0 0 chr10 43585527 43585579 -96731186 - MER116 DNA Mariner -27 53 2 313 293 111 11 chr10 43586879 43587060 -96729705 + L1MC4a LINE L1 5701 5899 -1909 181 364 10 0 chr10 43588387 43588486 -96728279 + MIR SINE MIR 44 143 -65 231 91 0 0 chr10 43588517 43588550 -96728215 + L2 LINE L2 3264 3296 -17 1854 154 0 20 chr10 43589018 43589323 -96727442 - AluJb SINE Alu -13 299 1 336 48 0 0 chr10 43589379 43589421 -96727344 + (TG)n Simple_repeat Simple_repeat 2 43 0 899 80 0 0 chr10 43590440 43590552 -96726213 + FLAM_C SINE Alu 1 112 -31 23 97 0 0 chr10 43591633 43591705 -96725060 + AT_rich Low_complexity Low_complexity 1 72 0 635 257 23 6 chr10 43594013 43594184 -96722581 + MIR SINE MIR 1 174 -88 1937 142 55 19 chr10 43594888 43595213 -96721552 + MER1B DNA MER1_type 1 337 0 2056 140 3 0 chr10 43595540 43595840 -96720925 - AluSx SINE Alu -11 301 1 231 174 58 43 chr10 43598288 43598357 -96718408 + MIR SINE MIR 180 249 -13 1023 156 10 9 chr10 43598522 43598719 -96718046 - L1MB3 LINE L1 -57 6127 5930 251 158 0 35 chr10 43599430 43599487 -96717278 + GA-rich Low_complexity Low_complexity 4 58 0 308 339 81 23 chr10 43599513 43599687 -96717078 + L1MEd LINE L1 3 186 -5933 811 235 60 0 chr10 43599828 43600011 -96716754 + MER58A DNA MER1_type 19 212 -12 541 314 58 20 chr10 43600127 43600471 -96716294 + L1M4 LINE L1 3240 3596 -2550 297 166 0 0 chr10 43600504 43600571 -96716194 + L1MA8 LINE L1 4973 5039 -1107 228 179 54 36 chr10 43600571 43600627 -96716138 + MER3 DNA MER1_type 147 203 -6 5694 145 33 13 chr10 43600653 43601213 -96715552 + L1MA8 LINE L1 5054 5601 -690 2126 99 46 7 chr10 43601213 43601497 -96715268 + AluSg SINE Alu 3 297 -13 5694 145 33 13 chr10 43601497 43602146 -96714619 + L1MA8 LINE L1 5601 6288 -3 31038 117 14 17 chr10 43602266 43608068 -96708697 - L1P3 LINE L1 -655 5814 3 231 250 0 0 chr10 43608134 43608202 -96708563 + (TA)n Simple_repeat Simple_repeat 2 69 0 225 178 0 0 chr10 43608204 43608249 -96708516 + LTR66 LTR ERVL 394 438 -172 1456 200 108 14 chr10 43608613 43608973 -96707792 - MSTD LTR MaLR 0 396 3 7836 225 32 31 chr10 43608982 43610707 -96706058 - MSTD-int LTR MaLR -7 1728 2 938 182 14 64 chr10 43610709 43610929 -96705836 - MSTD LTR MaLR 0 396 188 401 164 0 0 chr10 43610940 43611013 -96705752 - L1PA14 LINE L1 0 6161 6089 680 118 0 17 chr10 43611356 43611475 -96705290 - L1PA14 LINE L1 -78 6083 5967 775 184 12 22 chr10 43611475 43611657 -96705108 - MSTC LTR MaLR -208 188 1 459 0 0 0 chr10 43612233 43612284 -96704481 + (TC)n Simple_repeat Simple_repeat 2 52 0 1986 130 7 3 chr10 43612284 43612568 -96704197 - AluSx SINE Alu -27 285 1 255 265 20 6 chr10 43613961 43614055 -96702710 + GA-rich Low_complexity Low_complexity 1 95 0 214 239 0 45 chr10 43614147 43614214 -96702551 - MIR SINE MIR -61 147 84 268 301 97 0 chr10 43614360 43614473 -96702292 + L1ME3A LINE L1 5947 6070 -100 208 301 10 19 chr10 43615885 43615988 -96700777 + L2 LINE L2 3179 3280 -33 290 256 77 64 chr10 43616008 43616164 -96700601 - L2 LINE L2 0 3313 3156 33 0 0 0 chr10 43616916 43616949 -96699816 + AT_rich Low_complexity Low_complexity 1 33 0 184 322 34 0 chr10 43618069 43618128 -96698637 - L2 LINE L2 -556 2758 2698 297 244 202 1 chr10 43618682 43618783 -96697982 - MIR SINE MIR -87 121 2 1074 254 210 9 chr10 43618837 43619289 -96697476 - MLT1H1 LTR MaLR -12 543 1 645 167 0 0 chr10 43619551 43619677 -96697088 + (TCCA)n Simple_repeat Simple_repeat 4 129 0 490 283 167 24 chr10 43619722 43620058 -96696707 - L2 LINE L2 -103 3210 2827 188 224 41 41 chr10 43620288 43620337 -96696428 - MIR SINE MIR -70 192 144 254 262 215 50 chr10 43620647 43620949 -96695816 + LTR67 LTR ERVL 2 353 -204 859 312 85 45 chr10 43620961 43621705 -96695060 - L1M4 LINE L1 -2682 3464 2651 242 294 78 10 chr10 43621792 43621894 -96694871 + L2 LINE L2 3200 3308 -5 3402 125 14 16 chr10 43621901 43622404 -96694361 - MER1A DNA MER1_type -5 524 23 711 309 72 37 chr10 43622499 43622848 -96693917 - L2 LINE L2 -6 3307 2947 2299 197 13 28 chr10 43622995 43623461 -96693304 + MLT2B2 LTR ERVL 1 459 -56 1200 194 17 0 chr10 43623465 43623697 -96693068 + MER8 DNA MER2_type 1 236 -3 209 297 94 51 chr10 43624158 43624434 -96692331 - L2 LINE L2 -887 2427 2140 2453 175 38 40 chr10 43625653 43626174 -96690591 + MLT2B1 LTR ERVL 1 520 0 376 355 32 28 chr10 43626267 43626484 -96690281 - L3 LINE CR1 -67 1510 1293 192 337 108 0 chr10 43626598 43626681 -96690084 + L2 LINE L2 3154 3245 -27 412 156 52 0 chr10 43627716 43627793 -96688972 + MER53 DNA DNA 1 81 -108 397 131 222 0 chr10 43627732 43627831 -96688934 - MER53 DNA DNA -7 182 62 * 1759 144 40 0 chr10 43627859 43628157 -96688608 + AluJo SINE Alu 1 310 -2 262 330 0 9 chr10 43628528 43628640 -96688125 + MIR SINE MIR 125 235 -27 233 193 53 0 chr10 43631732 43631789 -96684976 - L1P LINE L1 -797 5349 5290 313 176 47 35 chr10 43631824 43631909 -96684856 - L1MEd LINE L1 -5216 903 818 467 294 5 27 chr10 43632148 43632335 -96684430 - L1MC5 LINE L1 -48 7913 7731 235 216 48 32 chr10 43632345 43632470 -96684295 + (TA)n Simple_repeat Simple_repeat 1 127 0 180 0 0 0 chr10 43632472 43632492 -96684273 + (CA)n Simple_repeat Simple_repeat 2 21 0 325 278 0 0 chr10 43632494 43632627 -96684138 + L1PB4 LINE L1 5795 5927 -229 28 61 0 0 chr10 43632842 43632891 -96683874 + AT_rich Low_complexity Low_complexity 1 49 0 2650 19 3 3 chr10 43634022 43634333 -96682432 + AluY SINE Alu 1 311 0 2363 88 0 0 chr10 43634347 43634655 -96682110 + AluSq SINE Alu 1 308 -5 655 126 29 0 chr10 43634716 43634819 -96681946 + FLAM_C SINE Alu 1 106 -37 467 294 5 27 chr10 43635138 43635325 -96681440 - L1MC5 LINE L1 -48 7913 7731 235 216 48 32 chr10 43635335 43635460 -96681305 + (TA)n Simple_repeat Simple_repeat 1 127 0 180 0 0 0 chr10 43635462 43635482 -96681283 + (CA)n Simple_repeat Simple_repeat 2 21 0 2343 144 0 0 chr10 43635484 43635846 -96680919 + L1PB4 LINE L1 5795 6156 0 611 236 112 40 chr10 43635934 43636230 -96680535 - L1MC5 LINE L1 -385 7576 7260 238 340 48 19 chr10 43636383 43636486 -96680279 + MIR SINE MIR 8 113 -149 199 291 18 0 chr10 43636634 43636689 -96680076 + MIR3 SINE MIR 143 198 -10 405 243 42 130 chr10 43637143 43637427 -96679338 - L2 LINE L2 0 3313 3055 183 80 0 0 chr10 43637866 43637891 -96678874 + (CAT)n Simple_repeat Simple_repeat 2 26 0 246 293 17 14 chr10 43638543 43638665 -96678100 + MIR SINE MIR 3 125 -83 774 118 199 16 chr10 43639242 43639428 -96677337 + L1MA9 LINE L1 6092 6311 -1 193 274 83 0 chr10 43640505 43640589 -96676176 + L2 LINE L2 1959 2049 -1265 216 338 43 22 chr10 43641289 43641428 -96675337 + L2 LINE L2 2921 3062 -210 213 154 0 0 chr10 43641428 43641467 -96675298 + G-rich Low_complexity Low_complexity 5 43 0 279 322 158 7 chr10 43644089 43644241 -96672524 + MER5B DNA MER1_type 4 178 0 550 267 33 0 chr10 43644352 43644502 -96672263 - MER5B DNA MER1_type -6 172 18 360 0 0 0 chr10 43644750 43644790 -96671975 + (CA)n Simple_repeat Simple_repeat 2 41 0 195 42 0 0 chr10 43645948 43645972 -96670793 + (T)n Simple_repeat Simple_repeat 1 24 0 214 343 121 24 chr10 43647112 43647278 -96669487 - MIR3 SINE MIR -14 194 13 180 325 92 0 chr10 43648070 43648190 -96668575 + L3 LINE CR1 1149 1279 -298 192 290 97 0 chr10 43648405 43648467 -96668298 + L2 LINE L2 487 554 -2760 350 260 118 91 chr10 43648479 43648910 -96667855 - L2 LINE L2 -351 2963 2521 2129 129 0 0 chr10 43649676 43649987 -96666778 + AluSq SINE Alu 1 311 -2 2337 72 0 0 chr10 43651480 43651773 -96664992 - AluSc SINE Alu -16 293 1 255 195 0 65 chr10 43652067 43652144 -96664621 + CT-rich Low_complexity Low_complexity 1 72 0 279 316 43 7 chr10 43654522 43654661 -96662104 + MIR SINE MIR 64 207 -55 236 324 9 38 chr10 43656123 43656228 -96660537 + MER94 DNA DNA 7 108 -26 229 278 145 40 chr10 43656668 43656916 -96659849 + L1ME4a LINE L1 5816 6089 -32 306 278 21 0 chr10 43657814 43657911 -96658854 + L1MC/D LINE L1 5694 5792 -2016 21 0 0 0 chr10 43657946 43657967 -96658798 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 43658117 43658156 -96658609 + AT_rich Low_complexity Low_complexity 1 39 0 5268 174 19 23 chr10 43660463 43662191 -96654574 + L1MA9 LINE L1 4553 6276 -36 257 315 24 24 chr10 43662374 43662501 -96654264 - L1MC/D LINE L1 -1911 5897 5771 298 248 9 9 chr10 43662515 43662620 -96654145 + CT-rich Low_complexity Low_complexity 3 107 0 537 250 175 0 chr10 43662663 43662823 -96653942 - MER91B DNA MER1_type -1 189 2 599 250 13 13 chr10 43663375 43663603 -96653162 - L1M4 LINE L1 -2824 3322 3095 225 114 71 29 chr10 43663645 43663715 -96653050 - L1MA8 LINE L1 0 6291 6219 * 2181 199 61 27 chr10 43663709 43664331 -96652434 - L1M4 LINE L1 -3059 3087 2445 318 245 73 119 chr10 43664560 43664821 -96651944 - L1M4 LINE L1 -2796 3350 3102 307 262 0 24 chr10 43664870 43664954 -96651811 + CT-rich Low_complexity Low_complexity 3 84 0 1131 198 0 45 chr10 43665003 43665250 -96651515 - MER8 DNA MER2_type -3 236 1 2280 135 56 44 chr10 43665588 43666017 -96650748 + L1PA16 LINE L1 5725 6158 -8 2095 145 46 76 chr10 43667981 43668534 -96648231 - MLT2A2 LTR ERVL 0 554 1 274 303 233 14 chr10 43668542 43668889 -96647876 - L2 LINE L2 -665 2649 2227 3805 180 89 19 chr10 43669033 43669838 -96646927 + MER21B LTR ERV1 1 862 -1 347 344 99 56 chr10 43670004 43670310 -96646455 - L2 LINE L2 -1857 1457 1166 2829 58 23 0 chr10 43670310 43670654 -96646111 + THE1A LTR MaLR 1 352 -3 347 344 99 56 chr10 43670654 43671063 -96645702 - L2 LINE L2 -2148 1166 711 1413 228 16 11 chr10 43671121 43671575 -96645190 - MLT2B1 LTR ERVL -5 510 9 272 349 67 30 chr10 43671587 43671856 -96644909 - LTR16C LTR ERVL -12 479 201 607 317 69 13 chr10 43673419 43673722 -96643043 - ERVL LTR ERVL -2560 3204 2885 221 245 79 86 chr10 43673889 43674028 -96642737 + MIR SINE MIR 125 262 0 234 0 0 0 chr10 43674052 43674078 -96642687 + (T)n Simple_repeat Simple_repeat 1 26 0 395 297 29 14 chr10 43675821 43675959 -96640806 + MIR SINE MIR 74 213 -49 422 305 46 28 chr10 43677205 43677406 -96639359 - MIR SINE MIR -44 218 16 834 227 7 86 chr10 43679159 43679450 -96637315 + MER33 DNA MER1_type 56 323 -1 327 130 0 0 chr10 43679503 43679557 -96637208 + (CA)n Simple_repeat Simple_repeat 2 55 0 312 351 111 0 chr10 43681316 43681524 -96635241 + HAL1 LINE L1 1104 1334 -1173 337 195 8 13 chr10 43681717 43681829 -96634936 - MER53 DNA DNA 0 189 23 928 214 0 0 chr10 43682328 43682501 -96634264 - FRAM SINE Alu -12 164 1 21 0 0 0 chr10 43683992 43684013 -96632752 + AT_rich Low_complexity Low_complexity 1 21 0 549 0 0 0 chr10 43684708 43684769 -96631996 + (CA)n Simple_repeat Simple_repeat 2 62 0 926 301 39 32 chr10 43685110 43685516 -96631249 + L3 LINE CR1 517 925 -652 1368 223 56 13 chr10 43685951 43686256 -96630509 - MLT1A2 LTR MaLR -56 318 1 298 260 34 136 chr10 43686883 43687033 -96629732 + MIR SINE MIR 31 162 -100 1553 219 35 14 chr10 43687033 43687399 -96629366 + MLT1A2 LTR MaLR 1 374 0 298 260 34 136 chr10 43687399 43687425 -96629340 + MIR SINE MIR 162 189 -73 313 333 47 8 chr10 43687561 43687690 -96629075 + L2 LINE L2 3180 3313 0 268 282 243 20 chr10 43687767 43687969 -96628796 - MIR SINE MIR 0 262 16 39267 76 15 6 chr10 43688861 43694952 -96621813 - L1PA6 LINE L1 0 6154 11 2066 106 3 0 chr10 43694965 43695248 -96621517 - AluSg SINE Alu -10 300 17 449 300 57 0 chr10 43695339 43695479 -96621286 - MER58A DNA MER1_type 0 148 1 249 346 125 0 chr10 43695486 43695590 -96621175 + MIR SINE MIR 36 152 -110 311 209 174 12 chr10 43695593 43695679 -96621086 - MLT1A1 LTR MaLR -264 101 2 1913 177 18 18 chr10 43696782 43697167 -96619598 + MLT1B LTR MaLR 6 390 0 262 263 91 0 chr10 43697359 43697458 -96619307 + MER94 DNA DNA 1 108 -26 269 313 69 7 chr10 43698258 43698402 -96618363 - L1ME3 LINE L1 -116 6046 5894 232 184 294 55 chr10 43698405 43698514 -96618251 + L2 LINE L2 3179 3313 0 843 244 119 74 chr10 43699544 43699897 -96616868 - MLT1A2 LTR MaLR -1 373 5 420 239 33 0 chr10 43701698 43701790 -96614975 + MIR SINE MIR 101 195 -67 439 252 83 78 chr10 43701931 43702235 -96614530 - LTR48B LTR ERV1 -7 780 390 * 693 220 58 14 chr10 43702207 43702466 -96614299 - MER34 LTR ERV1 -416 126 1 356 316 60 8 chr10 43702475 43702592 -96614173 + MIR SINE MIR 58 180 -82 766 204 0 0 chr10 43703455 43703587 -96613178 + MER45A DNA AcHobo 47 178 0 319 219 82 0 chr10 43705461 43705534 -96611231 + L2 LINE L2 3235 3313 0 4273 175 48 20 chr10 43705902 43706945 -96609820 - L1MB3 LINE L1 -3 6180 5108 265 191 15 15 chr10 43706946 43707014 -96609751 + L1M4 LINE L1 2128 2195 -3951 278 283 0 33 chr10 43707019 43707111 -96609654 + AluY SINE Alu 107 195 -106 460 141 0 0 chr10 43707111 43707182 -96609583 + AluJ/FRAM SINE Alu 233 303 -9 1409 253 49 24 chr10 43707194 43707703 -96609062 + L1M4 LINE L1 2221 2742 -3404 445 243 69 34 chr10 43707731 43707906 -96608859 + LTR1B LTR ERV1 42 226 -559 739 187 29 38 chr10 43707966 43708144 -96608621 + LTR1B LTR ERV1 343 498 -328 320 271 25 42 chr10 43708226 43708344 -96608421 + LTR28 LTR ERV1 905 1020 0 400 148 123 37 chr10 43708344 43708425 -96608340 - MLT1B LTR MaLR -302 88 1 3646 244 42 54 chr10 43708431 43708962 -96607803 + L1M4 LINE L1 2745 3281 -2865 231 139 0 0 chr10 43708962 43708998 -96607767 + U2 snRNA snRNA 1 36 -152 3646 244 42 54 chr10 43708998 43709426 -96607339 + L1M4 LINE L1 3281 3712 -2434 1767 175 62 22 chr10 43709426 43709797 -96606968 - MLT1B LTR MaLR 0 390 5 3646 244 42 54 chr10 43709797 43710332 -96606433 + L1M4 LINE L1 3712 4257 -1889 1706 140 15 0 chr10 43710484 43710658 -96606107 - AluSx SINE Alu -9 303 122 207 0 0 0 chr10 43710658 43710681 -96606084 + (TG)n Simple_repeat Simple_repeat 2 24 0 1706 140 15 0 chr10 43710681 43710770 -96605995 - AluSx SINE Alu -190 122 36 332 289 99 76 chr10 43711090 43711433 -96605332 + L1M4 LINE L1 2154 2504 -3642 790 305 105 72 chr10 43711644 43712159 -96604606 + L1M4 LINE L1 2773 3304 -2842 397 201 12 82 chr10 43712485 43712562 -96604203 - LTR41 LTR ERVL 0 795 708 1803 146 7 3 chr10 43712562 43712856 -96603909 + AluSq SINE Alu 2 296 -17 397 201 12 82 chr10 43712856 43712912 -96603853 - LTR41 LTR ERVL -87 708 650 511 247 70 13 chr10 43713190 43713348 -96603417 - LTR41 LTR ERVL -597 176 10 234 317 140 48 chr10 43713869 43714263 -96602502 - L2 LINE L2 -1231 2083 1654 274 96 19 19 chr10 43714500 43714552 -96602213 + (TG)n Simple_repeat Simple_repeat 2 53 0 264 358 49 49 chr10 43715673 43716098 -96600667 - L2 LINE L2 -19 3253 2829 343 260 34 34 chr10 43717395 43717572 -96599193 + (TGGG)n Simple_repeat Simple_repeat 1 177 0 292 353 0 0 chr10 43717504 43717671 -96599094 + G-rich Low_complexity Low_complexity 1 167 0 * 227 232 89 0 chr10 43718391 43718447 -96598318 - L3b LINE CR1 -247 1336 1276 243 321 25 0 chr10 43718905 43718986 -96597779 + MIR3 SINE MIR 94 176 -32 336 24 0 0 chr10 43719171 43719212 -96597553 + (TG)n Simple_repeat Simple_repeat 1 41 0 263 363 140 0 chr10 43720516 43720673 -96596092 - MIR SINE MIR -34 228 50 547 156 0 0 chr10 43720806 43720896 -96595869 + L1PA16 LINE L1 6068 6157 -9 36 23 0 0 chr10 43720896 43720939 -96595826 + AT_rich Low_complexity Low_complexity 1 43 0 318 303 130 10 chr10 43721144 43721444 -96595321 + L1MEd LINE L1 550 885 -5234 3531 190 60 65 chr10 43721465 43722393 -96594372 - L1MB8 LINE L1 -1 6177 5254 22315 68 2 8 chr10 43722499 43725576 -96591189 + L1P3 LINE L1 2444 5499 -673 3828 137 63 19 chr10 43725696 43726344 -96590421 - L1MA8 LINE L1 -3 6288 5609 1856 134 50 7 chr10 43726344 43726627 -96590138 - AluSg SINE Alu -13 297 3 3828 137 63 19 chr10 43726627 43726649 -96590116 - L1MA8 LINE L1 -682 5609 5589 3164 126 15 11 chr10 43726797 43727329 -96589436 - L1M1 LINE L1 -4713 2852 2319 8114 29 0 0 chr10 43727370 43728941 -96587824 - L1PA3 LINE L1 0 6155 4587 7810 102 19 7 chr10 43729041 43730129 -96586636 + THE1-int LTR MaLR 159 1259 -321 222 370 31 10 chr10 43730390 43730582 -96586183 - MIR SINE MIR -14 248 53 1214 108 0 16 chr10 43731469 43731655 -96585110 + HERVH48 LTR ERV1 6472 6654 0 2769 98 30 52 chr10 43731655 43732062 -96584703 + MER48 LTR ERV1 1 398 0 1241 196 48 94 chr10 43732073 43732465 -96584300 + MLT1B LTR MaLR 1 374 -16 1239 0 0 0 chr10 43732617 43732748 -96584017 + L1PA2 LINE L1 6025 6155 0 2165 137 0 3 chr10 43732872 43733185 -96583580 + AluSx SINE Alu 1 312 0 1268 252 42 18 chr10 43733261 43733642 -96583123 - L1MA9 LINE L1 -38 6274 5885 898 171 0 32 chr10 43733642 43733800 -96582965 - FAM SINE Alu 0 49 1 5097 163 16 4 chr10 43733901 43734734 -96582031 - HERVH48 LTR ERV1 -5811 843 1 2548 118 45 52 chr10 43734736 43735136 -96581629 - MER48 LTR ERV1 -1 397 1 245 272 149 9 chr10 43735198 43735312 -96581453 + HAL1 LINE L1 634 763 -1744 393 156 0 26 chr10 43735329 43735406 -96581359 - MER57A LTR ERV1 0 403 329 1049 313 35 7 chr10 43735594 43735997 -96580768 - L1PA12 LINE L1 -7166 415 2 1779 198 9 0 chr10 43736040 43736358 -96580407 + Tigger1 DNA MER2_type 20 340 -2078 * 1876 104 27 0 chr10 43736356 43736615 -96580150 - LTR9B LTR ERV1 -378 266 1 349 230 23 58 chr10 43737969 43737996 -96578769 - AluSg/x SINE Alu -99 201 175 4930 66 7 0 chr10 43737996 43738583 -96578182 - LTR10C LTR ERV1 0 591 1 349 230 23 58 chr10 43738583 43738642 -96578123 - AluSg/x SINE Alu -125 175 118 235 347 28 14 chr10 43739011 43739155 -96577610 + MIR3 SINE MIR 33 178 -30 1915 157 3 0 chr10 43741962 43742248 -96574517 - AluSx SINE Alu -23 289 3 22 0 0 0 chr10 43742375 43742397 -96574368 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr10 43742476 43742532 -96574233 + AT_rich Low_complexity Low_complexity 1 56 0 269 61 0 0 chr10 43742672 43742738 -96574027 - AluSp/q SINE Alu 0 316 251 17616 44 2 8 chr10 43742838 43744825 -96571940 + L1PA4 LINE L1 3300 5296 -859 2375 92 0 16 chr10 43744825 43745141 -96571624 + AluY SINE Alu 1 311 0 17616 44 2 8 chr10 43745141 43745995 -96570770 + L1PA4 LINE L1 5296 6153 -2 2128 121 0 3 chr10 43746059 43746366 -96570399 - AluY SINE Alu -5 306 1 271 308 186 17 chr10 43746598 43746770 -96569995 + MIR SINE MIR 50 250 -12 315 0 0 0 chr10 43746852 43746887 -96569878 + (TG)n Simple_repeat Simple_repeat 1 35 0 4160 104 2 0 chr10 43746889 43747476 -96569289 - L1P LINE L1 -1286 4860 4273 504 225 78 42 chr10 43747476 43747667 -96569098 + Charlie7 DNA MER1_type 476 673 -1939 284 219 188 8 chr10 43747713 43747841 -96568924 + Charlie7 DNA MER1_type 2460 2610 -2 533 175 63 104 chr10 43748101 43748293 -96568472 + MLT2D LTR ERVL 66 250 -164 635 266 18 35 chr10 43748298 43748527 -96568238 + MIR SINE MIR 25 249 -13 22 0 0 0 chr10 43749245 43749267 -96567498 + AT_rich Low_complexity Low_complexity 1 22 0 26417 37 5 0 chr10 43749274 43753247 -96563518 - L1PA4 LINE L1 -2 6153 2163 9084 59 0 0 chr10 43753236 43754346 -96562419 - L1PA4 LINE L1 -4502 1644 535 * 9021 178 33 25 chr10 43754446 43756390 -96560375 - L1MEc LINE L1 -1549 4666 2707 919 350 2 28 chr10 43756793 43757222 -96559543 - L1 LINE L1 -5537 418 1 258 242 15 0 chr10 43757224 43757290 -96559475 - L1MEc LINE L1 -3844 2371 2305 415 289 44 93 chr10 43757327 43757735 -96559030 - L1MEc LINE L1 -4094 2302 1915 520 272 98 43 chr10 43757855 43757978 -96558787 - L1MEc LINE L1 -4703 1693 1578 2188 143 42 22 chr10 43757978 43758335 -96558430 - THE1B LTR MaLR 0 364 1 12143 96 9 13 chr10 43758335 43759919 -96556846 - THE1B-int LTR MaLR 0 1580 3 2424 138 8 22 chr10 43759920 43760289 -96556476 - THE1B LTR MaLR 0 364 1 520 272 98 43 chr10 43760289 43760603 -96556162 - L1MEc LINE L1 -4817 1579 1229 308 212 109 36 chr10 43760804 43760941 -96555824 - L1MEc LINE L1 -5028 1177 1031 180 0 0 0 chr10 43761466 43761486 -96555279 + (T)n Simple_repeat Simple_repeat 1 20 0 302 285 15 110 chr10 43761616 43761816 -96554949 - L1MEc LINE L1 -6194 202 22 749 334 9 30 chr10 43762112 43762450 -96554315 - L2 LINE L2 -1232 2082 1752 361 265 11 22 chr10 43763011 43763085 -96553680 + (TA)n Simple_repeat Simple_repeat 2 75 -105 1904 178 23 26 chr10 43763085 43763427 -96553338 + MER2 DNA MER2_type 2 342 -2 361 265 11 22 chr10 43763427 43763533 -96553232 + (TA)n Simple_repeat Simple_repeat 75 180 0 678 198 28 23 chr10 43764100 43764277 -96552488 - MER45R DNA AcHobo 0 1581 1404 761 208 73 0 chr10 43764408 43764586 -96552179 - MER45 DNA AcHobo -1387 194 4 190 276 17 17 chr10 43764750 43764808 -96551957 + MIR SINE MIR 87 144 -64 3126 141 43 54 chr10 43765334 43765894 -96550871 + MLT2B3 LTR ERVL 1 554 0 339 295 101 40 chr10 43765933 43766160 -96550605 - L2 LINE L2 -1008 2306 2066 261 331 71 16 chr10 43766330 43766514 -96550251 - MIR SINE MIR -13 249 56 232 274 0 0 chr10 43766691 43766753 -96550012 + MIR SINE MIR 13 74 -188 222 341 24 12 chr10 43768048 43768133 -96548632 + MIR SINE MIR 57 142 -120 26 30 0 0 chr10 43768344 43768377 -96548388 + AT_rich Low_complexity Low_complexity 1 33 0 218 228 109 40 chr10 43768414 43768515 -96548250 - MIR SINE MIR -54 208 101 943 224 84 22 chr10 43769154 43769476 -96547289 + LTR37A LTR ERV1 85 426 0 2297 119 3 3 chr10 43769995 43770305 -96546460 - AluSp SINE Alu -3 310 1 245 277 128 11 chr10 43770364 43770458 -96546307 + MLT1K LTR MaLR 141 245 -343 398 281 80 60 chr10 43770532 43770731 -96546034 + MLT1K LTR MaLR 331 533 -55 259 196 98 39 chr10 43770805 43770907 -96545858 + MIR SINE MIR 101 208 -54 32 26 0 0 chr10 43770947 43770986 -96545779 + AT_rich Low_complexity Low_complexity 1 39 0 781 162 78 0 chr10 43771040 43771182 -96545583 + MLT1A1 LTR MaLR 204 356 -9 1427 232 55 42 chr10 43771855 43772238 -96544527 - MSTD LTR MaLR -8 388 1 2319 109 0 6 chr10 43772786 43773099 -96543666 - AluSx SINE Alu -1 311 1 1731 194 48 14 chr10 43773104 43773475 -96543290 - MLT1B LTR MaLR 0 390 7 1596 155 52 15 chr10 43777075 43777391 -96539374 + AluJb SINE Alu 1 326 0 780 159 7 23 chr10 43777401 43777700 -96539065 + L1MA8 LINE L1 5920 6289 -2 2132 156 38 0 chr10 43779412 43779785 -96536980 + MLT1B LTR MaLR 4 390 0 209 182 0 0 chr10 43779916 43779949 -96536816 + (CA)n Simple_repeat Simple_repeat 1 33 0 233 344 25 6 chr10 43781555 43781712 -96535053 - L2 LINE L2 -279 2993 2834 290 304 9 26 chr10 43782039 43782154 -96534611 + CT-rich Low_complexity Low_complexity 3 115 0 4683 131 114 8 chr10 43782157 43782980 -96533785 - L1MC1 LINE L1 0 6333 5424 3467 201 48 19 chr10 43782997 43783334 -96533431 - L1ME1 LINE L1 -3 6163 5827 990 243 71 51 chr10 43783334 43783882 -96532883 - L1PA16 LINE L1 -338 5828 5270 6052 59 0 1 chr10 43783884 43784628 -96532137 - L1PA5 LINE L1 -2 6152 5410 4792 239 62 48 chr10 43784638 43784833 -96531932 - L1ME1 LINE L1 -823 5323 5132 1795 178 0 3 chr10 43784833 43785131 -96531634 - AluJo SINE Alu -15 297 1 4792 239 62 48 chr10 43785131 43786718 -96530047 - L1ME1 LINE L1 -1014 5132 3516 215 265 0 44 chr10 43788438 43788506 -96528259 + L2 LINE L2 3186 3250 -22 336 180 22 11 chr10 43788955 43789044 -96527721 + CT-rich Low_complexity Low_complexity 4 93 0 676 198 0 11 chr10 43789129 43789311 -96527454 + (CA)n Simple_repeat Simple_repeat 1 180 0 330 301 19 0 chr10 43790160 43790263 -96526502 + MIR SINE MIR 37 141 -121 22 0 0 0 chr10 43790570 43790592 -96526173 + AT_rich Low_complexity Low_complexity 1 22 0 2136 109 7 0 chr10 43791706 43792022 -96524743 - AluSp SINE Alu 0 319 2 2193 94 0 23 chr10 43792123 43792448 -96524317 - AluY SINE Alu 0 311 1 2151 119 0 7 chr10 43792916 43793211 -96523554 + AluSg SINE Alu 1 293 -17 929 206 13 12 chr10 43794322 43794631 -96522134 - MLT1B LTR MaLR -11 379 2 237 261 85 46 chr10 43794831 43794984 -96521781 - L1M4 LINE L1 -1950 4196 4038 1455 179 50 33 chr10 43798653 43798954 -96517811 + AluJo SINE Alu 1 306 -6 229 241 36 12 chr10 43801283 43801366 -96515399 - MIR SINE MIR -115 147 63 704 322 108 58 chr10 43802861 43802963 -96513802 - L1MEd LINE L1 -4909 1210 1114 1488 177 40 7 chr10 43802963 43803283 -96513482 - AluJo SINE Alu 0 329 1 704 322 108 58 chr10 43803283 43804290 -96512475 - L1MEd LINE L1 -5005 1114 45 2100 86 55 31 chr10 43804819 43805111 -96511654 + AluSq SINE Alu 1 299 -14 711 271 69 74 chr10 43806681 43807031 -96509734 - L1MC4a LINE L1 -1908 5900 5553 21 0 0 0 chr10 43807042 43807063 -96509702 + AT_rich Low_complexity Low_complexity 1 21 0 1637 231 150 16 chr10 43807089 43807703 -96509062 - L1MC4a LINE L1 -1948 4198 3503 234 157 137 0 chr10 43807765 43807816 -96508949 + L1ME LINE L1 5647 5704 -466 721 256 19 19 chr10 43807855 43808066 -96508699 - MLT1A1 LTR MaLR 0 365 155 2436 265 61 20 chr10 43808066 43809116 -96507649 - L1MC4a LINE L1 -2638 3508 2416 2987 217 75 79 chr10 43809151 43810197 -96506568 + L1M4 LINE L1 14 1054 -5488 584 146 0 0 chr10 43810191 43810280 -96506485 - L1MB3 LINE L1 -65 6118 6030 * 3743 240 54 22 chr10 43810269 43812633 -96504132 + L1M4 LINE L1 2398 4879 -1765 299 115 115 0 chr10 43812760 43812812 -96503953 + MER21A LTR ERV1 12 69 -862 477 163 22 22 chr10 43812930 43813022 -96503743 + MER21A LTR ERV1 70 161 -770 * 1834 189 58 49 chr10 43813000 43813429 -96503336 + MER21B LTR ERV1 420 852 -11 224 253 187 0 chr10 43814116 43814207 -96502558 - MIR SINE MIR -5 257 150 455 195 81 8 chr10 43814207 43814330 -96502435 - L1MDb LINE L1 -2229 4177 4046 4495 234 79 28 chr10 43814355 43817721 -96499044 - L1MDb LINE L1 -2704 3702 262 317 77 0 0 chr10 43817748 43817800 -96498965 + L1MA3 LINE L1 6252 6303 -2 184 260 146 31 chr10 43817815 43817911 -96498854 + MIR SINE MIR 156 262 0 276 254 0 0 chr10 43817938 43817997 -96498768 + MIR SINE MIR 117 175 -87 580 271 208 8 chr10 43818009 43818245 -96498520 - MLT1G LTR MaLR -8 582 300 2242 126 27 15 chr10 43818245 43818578 -96498187 + MER1B DNA MER1_type 1 337 0 666 292 31 13 chr10 43818626 43818852 -96497913 - L1MDb LINE L1 -6172 237 8 246 161 113 16 chr10 43819550 43819612 -96497153 + Charlie7 DNA MER1_type 112 179 -2433 379 190 51 25 chr10 43819627 43819706 -96497059 - MLT2C2 LTR ERVL -236 228 148 743 243 64 22 chr10 43819881 43820194 -96496571 - LTR37A LTR ERV1 -20 406 81 237 204 0 0 chr10 43820345 43820389 -96496376 + Charlie7 DNA MER1_type 454 497 -2115 840 217 49 29 chr10 43820396 43820640 -96496125 + Charlie4a DNA MER1_type 164 412 -96 6369 102 5 4 chr10 43820649 43821966 -96494799 - L1PA8 LINE L1 -4 6168 4844 566 122 0 0 chr10 43821967 43822049 -96494716 + L1PA3 LINE L1 2 83 -6063 39548 58 6 3 chr10 43822049 43827025 -96489740 + L1PA3 LINE L1 297 5301 -854 2262 99 0 3 chr10 43827025 43827337 -96489428 + AluY SINE Alu 1 311 0 39548 58 6 3 chr10 43827337 43828070 -96488695 + L1PA3 LINE L1 5301 6030 -125 8350 214 52 69 chr10 43828177 43829240 -96487525 - L1MEc LINE L1 -970 5987 4907 252 0 0 0 chr10 43829240 43829268 -96487497 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 8350 214 52 69 chr10 43829268 43829976 -96486789 - L1MEc LINE L1 -2050 4907 4188 2498 158 27 2 chr10 43829976 43830420 -96486345 - L1PA16 LINE L1 -1 6165 5711 8350 214 52 69 chr10 43830420 43830796 -96485969 - L1MEc LINE L1 -2769 4188 3807 252 111 0 0 chr10 43830796 43830832 -96485933 - tRNA-Glu-GAG tRNA tRNA -39 36 1 8350 214 52 69 chr10 43830832 43832254 -96484511 - L1MEc LINE L1 -3150 3807 2474 1016 282 80 16 chr10 43832320 43832810 -96483955 - L1MEc LINE L1 -4427 2532 2012 * 4181 221 82 40 chr10 43832802 43833988 -96482777 - L1MEc LINE L1 -5595 1264 30 974 168 10 51 chr10 43835165 43835361 -96481404 - MER5A DNA MER1_type 0 189 2 330 232 12 12 chr10 43835874 43835956 -96480809 + L2 LINE L2 3181 3262 -10 1667 203 91 19 chr10 43836275 43836704 -96480061 - MLT1C LTR MaLR -7 460 1 344 236 95 27 chr10 43837155 43837303 -96479462 - MIR SINE MIR -88 174 17 260 295 107 40 chr10 43838271 43838420 -96478345 - L2 LINE L2 -2 3270 3112 371 292 18 9 chr10 43839173 43839286 -96477479 - MER94 DNA DNA -1 133 20 207 176 0 0 chr10 43840886 43840920 -96475845 + (TG)n Simple_repeat Simple_repeat 1 34 0 200 348 35 9 chr10 43841802 43841917 -96474848 + MIR SINE MIR 28 145 -117 188 206 159 32 chr10 43845232 43845295 -96471470 - L2 LINE L2 -2891 423 353 418 285 154 24 chr10 43846406 43846704 -96470061 - LTR33A LTR ERVL -127 396 60 236 213 110 71 chr10 43846847 43846974 -96469791 - MIR SINE MIR -55 207 76 1684 220 38 19 chr10 43847108 43847661 -96469104 - L1MEc LINE L1 -3519 3021 2497 209 301 27 0 chr10 43848451 43848524 -96468241 + GA-rich Low_complexity Low_complexity 4 78 0 472 241 82 60 chr10 43849468 43849700 -96467065 + MLT2F LTR ERVL 402 638 -25 1859 186 63 3 chr10 43850955 43851321 -96465444 + MLT1B LTR MaLR 3 390 0 1997 166 78 10 chr10 43851326 43851724 -96465041 - MSTB LTR MaLR -1 425 1 2145 106 6 13 chr10 43852568 43852880 -96463885 - AluSg SINE Alu 0 310 1 1681 181 103 134 chr10 43853683 43854353 -96462412 + MLT1E1 LTR MaLR 6 654 0 609 232 52 0 chr10 43855135 43855290 -96461475 - L1MD2 LINE L1 -1 6358 6196 1262 207 86 3 chr10 43855290 43855580 -96461185 + MLT1C LTR MaLR 1 314 -153 1018 291 10 10 chr10 43855643 43855938 -96460827 - L1MEc LINE L1 -6138 402 108 2621 163 84 32 chr10 43855942 43856501 -96460264 - L1MB3 LINE L1 -3 6180 5593 1460 160 99 13 chr10 43858135 43858447 -96458318 + MER44D DNA MER2_type 1 609 0 1782 132 66 39 chr10 43858599 43858933 -96457832 - MER61A LTR ERV1 0 343 1 26 30 0 0 chr10 43859243 43859276 -96457489 + AT_rich Low_complexity Low_complexity 1 33 0 893 221 214 50 chr10 43859317 43859719 -96457046 + MLT1D LTR MaLR 1 468 -37 * 1125 124 5 67 chr10 43859717 43859927 -96456838 - Tigger4(Zombi) DNA MER2_type -5 2726 2530 24 0 0 0 chr10 43859934 43859958 -96456807 + AT_rich Low_complexity Low_complexity 1 24 0 236 180 16 49 chr10 43860642 43860703 -96456062 - MIR SINE MIR -78 130 71 3947 177 9 11 chr10 43861307 43862052 -96454713 - L1MB3 LINE L1 0 6183 5440 283 279 87 6 chr10 43863256 43863439 -96453326 - LTR16B LTR ERVL -266 198 1 253 259 12 25 chr10 43863628 43863709 -96453056 - L3 LINE CR1 -73 1504 1425 3580 165 36 35 chr10 43863744 43864459 -96452306 + LTR62 LTR ERVK 2 717 -2 183 243 135 0 chr10 43864470 43864544 -96452221 + MER5A DNA MER1_type 12 95 -94 1281 221 75 31 chr10 43865091 43865237 -96451528 + MLT1A2 LTR MaLR 1 139 -235 1974 102 7 14 chr10 43865237 43865549 -96451216 + AluSx SINE Alu 1 310 0 1281 221 75 31 chr10 43865549 43865759 -96451006 + MLT1A2 LTR MaLR 139 374 0 245 299 72 43 chr10 43866246 43866453 -96450312 + L2 LINE L2 2851 3063 -209 467 241 151 72 chr10 43866453 43866744 -96450021 + MER33 DNA MER1_type 9 322 -2 194 351 50 45 chr10 43868726 43868928 -96447837 - L2 LINE L2 -240 3032 2830 234 141 62 0 chr10 43869007 43869071 -96447694 - L1M4 LINE L1 -957 5189 5122 219 125 0 0 chr10 43869115 43869155 -96447610 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 26745 46 2 4 chr10 43869535 43872948 -96443817 - L1P LINE L1 -2740 3406 8 861 193 0 0 chr10 43874293 43874579 -96442186 + (CAT)n Simple_repeat Simple_repeat 1 286 0 265 295 60 66 chr10 43874840 43875055 -96441710 - MIR SINE MIR -44 218 8 2041 149 29 17 chr10 43875454 43875803 -96440962 + L1PB3 LINE L1 5800 6152 -2 1922 118 93 4 chr10 43876906 43877185 -96439580 + AluSq SINE Alu 1 304 -9 215 130 19 0 chr10 43877792 43877846 -96438919 + A-rich Low_complexity Low_complexity 5 59 0 2169 78 65 7 chr10 43879667 43879960 -96436805 + AluY SINE Alu 1 310 -1 2037 128 21 0 chr10 43880523 43880812 -96435953 - AluSx SINE Alu -17 295 1 2356 106 3 0 chr10 43882492 43882803 -96433962 + AluSx SINE Alu 1 312 0 207 0 0 0 chr10 43882894 43882917 -96433848 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 36 0 0 chr10 43882936 43882964 -96433801 + AT_rich Low_complexity Low_complexity 1 28 0 2152 139 0 0 chr10 43883919 43884263 -96432502 + AluSx SINE Alu 1 344 0 196 292 28 0 chr10 43884806 43884878 -96431887 + L3 LINE CR1 1416 1489 -88 29 0 0 0 chr10 43886178 43886207 -96430558 + AT_rich Low_complexity Low_complexity 1 29 0 181 296 0 56 chr10 43887074 43887145 -96429620 + L2 LINE L2 3205 3271 -1 252 0 0 0 chr10 43888109 43888137 -96428628 + (TC)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 43891982 43892004 -96424761 + AT_rich Low_complexity Low_complexity 1 22 0 202 289 0 0 chr10 43892773 43892825 -96423940 + CT-rich Low_complexity Low_complexity 6 57 0 476 284 49 15 chr10 43893195 43893395 -96423370 - MIR SINE MIR -26 236 30 200 159 0 23 chr10 43893849 43893893 -96422872 + CT-rich Low_complexity Low_complexity 1 43 0 239 333 37 0 chr10 43895176 43895276 -96421489 - MIR SINE MIR -58 204 101 284 321 62 31 chr10 43895276 43895438 -96421327 - MER5A DNA MER1_type -1 188 22 247 242 45 0 chr10 43896341 43896407 -96420358 + MLT1K LTR MaLR 1 69 -519 300 301 44 44 chr10 43897250 43897386 -96419379 + L2 LINE L2 3137 3272 0 3707 223 56 32 chr10 43897794 43899370 -96417395 + L1ME2 LINE L1 4217 5833 -331 1714 146 188 19 chr10 43901847 43902272 -96414493 - LTR54B LTR ERV1 -1 497 1 1255 182 9 0 chr10 43902827 43903058 -96413707 - MER46A DNA MER2_type -3 233 1 2119 171 26 8 chr10 43903742 43904122 -96412643 + MLT1B LTR MaLR 1 387 -3 319 223 64 11 chr10 43904585 43904679 -96412086 - MER5A DNA MER1_type -85 104 6 980 306 93 39 chr10 43905087 43906032 -96410733 + L1MEd LINE L1 328 1323 -4882 386 322 60 50 chr10 43906385 43907002 -96409763 + L1MEd LINE L1 1898 2481 -3734 731 294 5 9 chr10 43907462 43907676 -96409089 + MIR SINE MIR 37 249 -13 180 292 0 0 chr10 43911726 43911774 -96404991 - L2 LINE L2 -7 3265 3218 15618 111 38 7 chr10 43913010 43915356 -96401409 - Tigger1 DNA MER2_type 0 2418 1 248 356 7 34 chr10 43916019 43916165 -96400600 + L2 LINE L2 3001 3142 -171 547 244 31 34 chr10 43916249 43916460 -96400305 + MER63 DNA MER1_type 1 1062 0 378 319 0 9 chr10 43916492 43916605 -96400160 + L2 LINE L2 3202 3313 0 8185 32 0 2 chr10 43917306 43919048 -96397717 + L1PA3 LINE L1 4398 6135 -20 232 24 24 48 chr10 43919052 43919094 -96397671 + (TAA)n Simple_repeat Simple_repeat 3 43 0 329 338 58 14 chr10 43920095 43920302 -96396463 + L1MEc LINE L1 166 381 -6015 374 113 62 12 chr10 43920313 43920393 -96396372 + L1MA8 LINE L1 6204 6287 -4 654 282 54 54 chr10 43920642 43921205 -96395560 + L1MEc LINE L1 607 1169 -5227 821 125 0 28 chr10 43921315 43921459 -96395306 + FRAM SINE Alu 36 175 -1 475 316 9 0 chr10 43922373 43922487 -96394278 - L2 LINE L2 0 3272 3158 1734 158 27 18 chr10 43925378 43925714 -96391051 + L1MB3 LINE L1 5842 6180 -3 713 305 72 26 chr10 43927662 43928010 -96388755 - L3 LINE CR1 -161 1416 1053 629 204 139 118 chr10 43929331 43929771 -96386994 + MLT2B2 LTR ERVL 10 509 -6 1443 199 0 31 chr10 43930028 43930345 -96386420 - AluJo SINE Alu -5 307 1 217 258 10 124 chr10 43931237 43931334 -96385431 - MIR SINE MIR -75 187 102 916 156 57 80 chr10 43932681 43932893 -96383872 + MER20 DNA MER1_type 1 207 -12 2096 118 0 3 chr10 43932893 43933190 -96383575 + AluSg SINE Alu 1 296 -14 2560 135 27 20 chr10 43934545 43934988 -96381777 + L1PA16 LINE L1 5721 6166 0 2037 133 0 0 chr10 43934993 43935294 -96381471 + AluSx SINE Alu 1 301 -11 934 163 12 0 chr10 43935300 43935466 -96381299 + L1MA10 LINE L1 6166 6333 -1 223 245 0 0 chr10 43937689 43937738 -96379027 + (CAGA)n Simple_repeat Simple_repeat 3 51 0 225 159 0 0 chr10 43938182 43938226 -96378539 + (TG)n Simple_repeat Simple_repeat 1 44 0 259 342 71 26 chr10 43940451 43940606 -96376159 - L2 LINE L2 -9 3263 3102 186 265 137 8 chr10 43940776 43940893 -96375872 - L2 LINE L2 -464 2850 2719 183 100 0 0 chr10 43941544 43941574 -96375191 + (A)n Simple_repeat Simple_repeat 1 30 0 226 59 88 0 chr10 43942285 43942319 -96374446 + L1P LINE L1 5393 5429 -726 546 194 0 62 chr10 43942319 43942448 -96374317 + FLAM_C SINE Alu 14 134 -9 1410 291 73 10 chr10 43942448 43943049 -96373716 + L1ME3 LINE L1 5433 6071 -91 189 0 0 0 chr10 43944253 43944274 -96372491 + (TCCCC)n Simple_repeat Simple_repeat 2 22 0 720 235 11 11 chr10 43944791 43944974 -96371791 - MER5A DNA MER1_type -4 185 3 512 309 64 35 chr10 43945247 43945671 -96371094 - MLT1H LTR MaLR -3 546 111 688 234 38 53 chr10 43947204 43947413 -96369352 - MIR SINE MIR 0 262 57 1406 219 123 15 chr10 43947547 43947953 -96368812 - L1M4 LINE L1 -1971 4175 3726 180 278 19 0 chr10 43949265 43949319 -96367446 - MIR SINE MIR -108 154 100 2981 141 19 19 chr10 43949444 43949963 -96366802 + L1MB3 LINE L1 5658 6176 -7 2415 195 74 95 chr10 43950856 43951630 -96365135 - L1MD2 LINE L1 -5 8431 5862 * 5166 175 27 8 chr10 43951619 43952933 -96363832 - L1MB1 LINE L1 -1 6167 4826 * 6076 230 108 28 chr10 43952930 43954679 -96362086 - L1MD2 LINE L1 -743 5797 4189 2411 119 112 5 chr10 43954679 43955064 -96361701 - MSTA LTR MaLR -2 426 1 6076 230 108 28 chr10 43955064 43955329 -96361436 - L1MD2 LINE L1 -2351 4189 3947 1348 178 4 0 chr10 43955329 43955560 -96361205 + MER46A DNA MER2_type 3 234 -2 6076 230 108 28 chr10 43955560 43955929 -96360836 - L1MD2 LINE L1 -2593 3947 3288 2083 210 46 40 chr10 43955909 43956075 -96360690 - L1MD2 LINE L1 -4579 1961 1798 * 2184 85 7 0 chr10 43956075 43956369 -96360396 + AluY SINE Alu 1 296 -15 2083 210 46 40 chr10 43956369 43956849 -96359916 - L1MD2 LINE L1 -4742 1798 1311 * 21255 123 25 16 chr10 43956846 43960600 -96356165 - L1MDa LINE L1 -2329 4211 17 960 245 219 18 chr10 43960713 43961454 -96355311 - L2 LINE L2 0 3313 2436 2687 13 0 0 chr10 43961624 43961927 -96354838 + AluYb8 SINE Alu 1 303 -15 276 77 0 0 chr10 43963407 43963446 -96353319 + (TG)n Simple_repeat Simple_repeat 1 39 0 195 42 0 0 chr10 43965211 43965235 -96351530 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 252 0 0 0 chr10 43965282 43965310 -96351455 + (CA)n Simple_repeat Simple_repeat 2 29 0 1092 235 12 25 chr10 43965794 43966113 -96350652 - L1MB1 LINE L1 -1897 4249 3935 1733 195 117 130 chr10 43966761 43967949 -96348816 + L1MC5 LINE L1 6611 7783 -178 291 128 0 0 chr10 43967989 43968028 -96348737 + MER94 DNA DNA 1 39 -95 2257 137 25 8 chr10 43968164 43968522 -96348243 + THE1B LTR MaLR 1 364 0 426 311 83 8 chr10 43968940 43969072 -96347693 - L2 LINE L2 -4 3268 3127 233 264 132 0 chr10 43969400 43969453 -96347312 - tRNA-Asn-AAC tRNA tRNA -6 71 12 475 245 48 14 chr10 43970229 43970376 -96346389 + L1MCa LINE L1 223 374 -6190 * 680 260 71 29 chr10 43970375 43970656 -96346109 + L1MCa LINE L1 679 971 -5074 35631 87 6 7 chr10 43970660 43976793 -96339972 + L1PA6 LINE L1 11 6152 -2 3615 232 41 31 chr10 43976802 43978510 -96338255 + L1MCa LINE L1 949 2638 -3926 2398 91 3 0 chr10 43978510 43978819 -96337946 + AluY SINE Alu 1 310 -1 3615 232 41 31 chr10 43978819 43979084 -96337681 + L1MCa LINE L1 2638 2899 -3665 2004 161 31 0 chr10 43979084 43979439 -96337326 - MER47A DNA MER2_type 0 366 1 3615 232 41 31 chr10 43979439 43980168 -96336597 + L1MCa LINE L1 2899 3813 -2751 302 356 126 49 chr10 43980217 43980803 -96335962 + L3 LINE CR1 187 839 -738 3052 189 7 16 chr10 43980803 43981370 -96335395 - MER68 LTR ERV1 0 562 1 302 356 126 49 chr10 43981370 43981484 -96335281 + L3 LINE CR1 839 942 -635 289 364 63 7 chr10 43981484 43981618 -96335147 + MIR3 SINE MIR 4 148 -60 243 88 0 0 chr10 43981618 43981652 -96335113 + (TAA)n Simple_repeat Simple_repeat 3 36 0 192 219 0 0 chr10 43981731 43981772 -96334993 + L3 LINE CR1 930 970 -607 509 304 80 54 chr10 43981926 43982314 -96334451 + L3 LINE CR1 1128 1525 -52 750 288 86 30 chr10 43982454 43982895 -96333870 + MLT1K LTR MaLR 123 588 0 201 313 36 24 chr10 43983570 43983653 -96333112 + MER91A DNA MER1_type 88 171 -25 4289 169 37 36 chr10 43983666 43985159 -96331606 + L1MB2 LINE L1 4676 6171 0 262 294 141 0 chr10 43985167 43985259 -96331506 + MER91A DNA MER1_type 90 194 -2 200 83 0 28 chr10 43986456 43986492 -96330273 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 29554 42 1 1 chr10 43986492 43991091 -96325674 - L1PA4 LINE L1 -24 6131 1529 16355 75 0 8 chr10 43991245 43993516 -96323249 - L1P LINE L1 -3893 2253 2 334 262 0 56 chr10 43996600 43996726 -96320039 + MER3 DNA MER1_type 91 209 0 213 369 12 0 chr10 43997443 43997527 -96319238 - L2 LINE L2 -51 3221 3137 481 217 18 60 chr10 43998596 43998762 -96318003 + MER53 DNA DNA 31 189 0 329 330 128 11 chr10 43998915 43999103 -96317662 + MIR SINE MIR 8 217 -45 4048 153 17 13 chr10 43999358 44000105 -96316660 + Tigger2 DNA MER2_type 1 750 -1968 1177 171 53 4 chr10 44000162 44000408 -96316357 + Tigger2 DNA MER2_type 2461 2718 0 1838 204 129 18 chr10 44000771 44001266 -96315499 + MLT1F1 LTR MaLR 18 567 0 427 232 275 7 chr10 44001269 44001407 -96315358 - MIR SINE MIR 0 262 88 191 375 78 16 chr10 44001493 44001621 -96315144 + L2 LINE L2 3137 3272 0 284 214 71 0 chr10 44001850 44001934 -96314831 + L1ME LINE L1 5728 5817 -304 2119 124 3 10 chr10 44002147 44002445 -96314320 - AluSq SINE Alu -17 296 1 339 274 59 46 chr10 44002706 44002859 -96313906 - MIR3 SINE MIR -22 186 32 507 349 46 4 chr10 44002981 44003219 -96313546 + MIR SINE MIR 15 262 0 297 269 32 96 chr10 44003318 44003474 -96313291 + MIR3 SINE MIR 55 200 -8 4747 187 46 67 chr10 44004281 44004929 -96311836 - L1MC3 LINE L1 -11 7774 7114 233 125 25 0 chr10 44004929 44004969 -96311796 - MLT1F1 LTR MaLR -477 90 50 4747 187 46 67 chr10 44004969 44005480 -96311285 - L1MC3 LINE L1 -671 7114 6606 1790 184 11 0 chr10 44005480 44005763 -96311002 - AluJo SINE Alu -26 286 1 4747 187 46 67 chr10 44005763 44005917 -96310848 - L1MC3 LINE L1 -1179 6606 6450 1173 172 71 0 chr10 44005922 44006189 -96310576 + L1MCa LINE L1 1716 2001 -4425 661 243 61 17 chr10 44007742 44007923 -96308842 + MER5A DNA MER1_type 1 189 0 518 261 20 0 chr10 44007947 44008100 -96308665 + Charlie4 DNA MER1_type 31 186 -1775 405 219 0 0 chr10 44008105 44008201 -96308564 - L1MB7 LINE L1 -8 6176 6081 1998 200 23 44 chr10 44008210 44008689 -96308076 + MLT2B2 LTR ERVL 1 469 -46 200 128 26 0 chr10 44008698 44008737 -96308028 + (TA)n Simple_repeat Simple_repeat 1 40 0 342 267 0 0 chr10 44008737 44008838 -96307927 + Charlie4 DNA MER1_type 60 160 -1801 241 100 40 0 chr10 44008844 44008894 -96307871 + (CAAT)n Simple_repeat Simple_repeat 3 54 0 * 460 66 40 0 chr10 44008893 44008969 -96307796 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 252 112 9 18 chr10 44008970 44009026 -96307739 + MLT2B2 LTR ERVL 455 508 -7 3570 233 41 11 chr10 44009031 44010641 -96306124 - L1ME1 LINE L1 -99 6067 4409 1532 244 62 25 chr10 44010634 44011458 -96305307 + L1MCa LINE L1 2177 2967 -3459 * 1726 254 47 25 chr10 44011459 44011938 -96304827 + L1MCa LINE L1 3189 3691 -2735 1487 185 62 14 chr10 44011938 44012230 -96304535 + AluJb SINE Alu 1 306 -6 1726 254 47 25 chr10 44012230 44012467 -96304298 + L1MCa LINE L1 3691 3921 -2505 23 0 0 0 chr10 44012552 44012575 -96304190 + AT_rich Low_complexity Low_complexity 1 23 0 201 176 0 0 chr10 44012853 44012887 -96303878 + T-rich Low_complexity Low_complexity 1 34 0 432 304 112 37 chr10 44014089 44014303 -96302462 - MIR SINE MIR 0 262 33 446 165 57 60 chr10 44015291 44015501 -96301264 + ORSL DNA AcHobo 9 275 0 2271 264 35 38 chr10 44015652 44016497 -96300268 + L1MCb LINE L1 4 846 -5199 200 243 0 0 chr10 44017688 44017725 -96299040 - L2 LINE L2 -94 3219 3183 24426 54 151 2 chr10 44017829 44021396 -96295369 + L1P LINE L1 1 4099 -2047 254 139 0 0 chr10 44021496 44021532 -96295233 - Alu SINE Alu -261 38 3 215 350 58 8 chr10 44021660 44021780 -96294985 - L2 LINE L2 0 3313 3188 2090 138 3 36 chr10 44021810 44021834 -96294931 + L1PA16 LINE L1 5807 5830 -336 1925 162 0 13 chr10 44021834 44022136 -96294629 + AluJo SINE Alu 1 298 -14 2113 134 0 3 chr10 44022139 44022444 -96294321 + AluSx SINE Alu 1 304 -8 2090 138 3 36 chr10 44022444 44022776 -96293989 + L1PA16 LINE L1 5832 6155 -11 3037 201 3 38 chr10 44022779 44023517 -96293248 + L1 LINE L1 4282 4993 -1153 405 0 0 0 chr10 44023685 44023730 -96293035 + (CA)n Simple_repeat Simple_repeat 2 46 0 1551 129 9 0 chr10 44024253 44024486 -96292279 - AluSg/x SINE Alu -11 299 65 27 0 0 0 chr10 44027093 44027120 -96289645 + AT_rich Low_complexity Low_complexity 1 27 0 2057 98 0 0 chr10 44027213 44027477 -96289288 + AluY SINE Alu 1 264 -47 532 246 102 80 chr10 44027872 44028360 -96288405 - L1MC5 LINE L1 -63 7898 7400 459 217 60 43 chr10 44028350 44028543 -96288222 + L1MC5 LINE L1 7023 7249 -625 * 23 33 0 0 chr10 44028811 44028841 -96287924 + AT_rich Low_complexity Low_complexity 1 30 0 332 241 66 91 chr10 44028961 44029202 -96287563 + L1M4 LINE L1 4022 4256 -1890 385 308 31 56 chr10 44029471 44029757 -96287008 + L1M4 LINE L1 4945 5223 -923 3612 132 48 12 chr10 44029940 44030343 -96286422 - L1 LINE L1 -893 5253 4815 2527 63 0 0 chr10 44030343 44030646 -96286119 - AluY SINE Alu -8 303 1 3612 132 48 12 chr10 44030646 44030914 -96285851 - L1 LINE L1 -1331 4815 4558 961 224 0 66 chr10 44031224 44031386 -96285379 - MER58A DNA MER1_type -2207 213 69 2132 117 0 19 chr10 44031386 44031702 -96285063 + AluJb SINE Alu 1 310 -2 961 224 0 66 chr10 44031702 44031767 -96284998 - MER58A DNA MER1_type -2351 69 1 183 80 0 0 chr10 44031831 44031856 -96284909 + (T)n Simple_repeat Simple_repeat 1 25 0 363 35 18 0 chr10 44032166 44032223 -96284542 - L1MA1 LINE L1 0 6302 6245 4370 219 27 4 chr10 44032323 44033328 -96283437 - L1P LINE L1 -3180 2966 1939 3672 161 50 1 chr10 44033438 44034140 -96282625 + L1MA4 LINE L1 5273 6008 -292 294 164 30 0 chr10 44034157 44034224 -96282541 + L1MB3 LINE L1 6087 6155 -28 21 36 0 0 chr10 44034225 44034253 -96282512 + AT_rich Low_complexity Low_complexity 1 28 0 1359 233 11 7 chr10 44034653 44034940 -96281825 - AluJo SINE Alu -14 288 1 23 0 0 0 chr10 44035374 44035397 -96281368 + AT_rich Low_complexity Low_complexity 1 23 0 241 259 157 38 chr10 44035426 44035611 -96281154 - L1MC4a LINE L1 -1879 5929 5723 2761 134 14 5 chr10 44035741 44036159 -96280606 + MSTA LTR MaLR 7 428 0 293 146 0 0 chr10 44036671 44036726 -96280039 - MLT2A2 LTR ERVL 0 453 399 213 226 0 0 chr10 44036726 44036779 -96279986 + (TA)n Simple_repeat Simple_repeat 1 53 0 328 188 16 0 chr10 44036779 44036843 -96279922 - MLT2A2 LTR ERVL -40 413 349 837 205 98 55 chr10 44037369 44037715 -96279050 + Charlie4a DNA MER1_type 80 440 -68 305 311 85 45 chr10 44039378 44039555 -96277210 + HAL1 LINE L1 1733 1916 -591 30 45 0 0 chr10 44040176 44040220 -96276545 + AT_rich Low_complexity Low_complexity 1 44 0 363 333 70 9 chr10 44041284 44041478 -96275287 - MIR SINE MIR -57 205 1 511 119 163 88 chr10 44041728 44041888 -96274877 + MLT1C LTR MaLR 4 175 -292 595 176 49 0 chr10 44041890 44041992 -96274773 + FLAM_C SINE Alu 1 107 -36 281 230 40 0 chr10 44042453 44042527 -96274238 - MIR SINE MIR -111 151 75 2104 81 0 11 chr10 44042928 44043211 -96273554 + AluY SINE Alu 1 280 -31 385 222 144 20 chr10 44043737 44043890 -96272875 + MLT1L LTR MaLR 220 391 -224 193 306 16 16 chr10 44043975 44044037 -96272728 - MER5A DNA MER1_type 0 189 128 1563 105 0 5 chr10 44044223 44044432 -96272333 + AluSx SINE Alu 2 209 -103 523 202 89 16 chr10 44044544 44044668 -96272097 - THE1C LTR MaLR -241 134 2 25 51 0 0 chr10 44044929 44044968 -96271797 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr10 44045146 44045175 -96271590 + AT_rich Low_complexity Low_complexity 1 29 0 518 240 11 167 chr10 44046519 44046653 -96270112 - MIR SINE MIR -7 255 186 1159 159 19 5 chr10 44046653 44046861 -96269904 - L1PB3 LINE L1 -1 6153 5943 518 240 11 167 chr10 44046861 44047003 -96269762 - MIR SINE MIR -76 186 24 346 362 58 0 chr10 44047362 44047500 -96269265 - MIR SINE MIR -69 193 48 1834 101 11 0 chr10 44047579 44047847 -96268918 - MER6 DNA MER2_type 0 865 595 1208 37 0 43 chr10 44047892 44048056 -96268709 - L1PA5 LINE L1 -1 6153 5997 1428 18 0 0 chr10 44048056 44048220 -96268545 + L1PA5 LINE L1 5805 5968 -186 360 127 18 0 chr10 44048220 44048275 -96268490 - MER6 DNA MER2_type -241 624 309 818 201 74 0 chr10 44048517 44048786 -96267979 + MER114 LTR ERV 214 502 -146 24 0 0 0 chr10 44048998 44049022 -96267743 + AT_rich Low_complexity Low_complexity 1 24 0 2524 163 34 0 chr10 44049034 44049475 -96267290 - LTR51 LTR ERV1 -34 637 182 598 198 69 0 chr10 44049502 44049618 -96267147 - LTR51 LTR ERV1 -547 124 1 195 289 61 62 chr10 44050035 44050143 -96266622 - MIR SINE MIR -67 141 45 932 185 4 88 chr10 44051241 44051468 -96265297 - LTR8A LTR ERV1 -486 241 34 23 0 0 0 chr10 44052114 44052137 -96264628 + AT_rich Low_complexity Low_complexity 1 23 0 534 304 73 85 chr10 44052313 44052807 -96263958 - L1MEd LINE L1 -5029 1090 603 678 236 129 39 chr10 44052908 44053218 -96263547 + L1MC4 LINE L1 7424 7761 -281 2344 84 0 7 chr10 44053999 44054297 -96262468 + AluSx SINE Alu 1 296 -16 258 240 270 20 chr10 44054322 44054422 -96262343 - MER5A DNA MER1_type 0 189 65 529 306 84 16 chr10 44054873 44054964 -96261801 + L1MC4 LINE L1 6962 7045 -997 2372 84 0 0 chr10 44054964 44055262 -96261503 + AluY SINE Alu 1 298 -13 529 306 84 16 chr10 44055262 44055493 -96261272 + L1MC4 LINE L1 7045 7306 -736 406 146 37 0 chr10 44055494 44055576 -96261189 - MLT1D LTR MaLR 0 505 421 2492 75 0 0 chr10 44055752 44056059 -96260706 + AluSx SINE Alu 1 307 -5 279 0 0 0 chr10 44056082 44056113 -96260652 + (TG)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr10 44056265 44056290 -96260475 + AT_rich Low_complexity Low_complexity 1 25 0 1729 180 27 15 chr10 44056439 44056772 -96259993 + MER58B DNA MER1_type 1 337 -4 996 232 45 68 chr10 44057166 44057610 -96259155 + L1ME2 LINE L1 5662 6095 -69 185 0 40 0 chr10 44057744 44057769 -96258996 + (TA)n Simple_repeat Simple_repeat 2 27 0 616 194 14 0 chr10 44058033 44058172 -96258593 - L1MA2 LINE L1 -3 6301 6161 284 114 0 0 chr10 44058578 44058622 -96258143 - L1MA9 LINE L1 -33 6279 6236 992 195 0 0 chr10 44059770 44059934 -96256831 + FRAM SINE Alu 2 165 -11 205 278 56 22 chr10 44061308 44061398 -96255367 + MIR SINE MIR 30 122 -140 873 301 83 57 chr10 44061534 44062136 -96254629 + L2 LINE L2 1735 2352 -962 1774 218 49 43 chr10 44062696 44063206 -96253559 - MER74A LTR ERVL 0 558 46 680 299 42 5 chr10 44064608 44064822 -96251943 + MIR SINE MIR 41 262 0 2076 141 0 13 chr10 44065013 44065325 -96251440 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr10 44065335 44065357 -96251408 + AT_rich Low_complexity Low_complexity 1 22 0 619 313 68 47 chr10 44065655 44066268 -96250497 - L1M4 LINE L1 -1488 4658 4033 873 142 196 0 chr10 44066469 44066673 -96250092 - L1MA8 LINE L1 -27 6264 6021 245 216 0 0 chr10 44066707 44066758 -96250007 - AluJ/monomer SINE Alu -1 307 257 35 54 0 0 chr10 44066909 44066965 -96249800 + AT_rich Low_complexity Low_complexity 1 56 0 264 298 0 39 chr10 44067176 44067196 -96249569 + MLT1I LTR MaLR 283 302 -107 370 160 53 0 chr10 44067196 44067271 -96249494 + MER116 DNA Mariner 2 80 0 264 298 0 39 chr10 44067271 44067354 -96249411 + MLT1I LTR MaLR 302 382 -27 430 145 34 51 chr10 44067501 44067618 -96249147 - L1MA4A LINE L1 -6 6297 6183 2410 84 0 0 chr10 44067623 44067931 -96248834 - AluY SINE Alu -3 308 1 598 195 25 8 chr10 44067940 44068058 -96248707 - FLAM_C SINE Alu -18 125 6 980 143 14 0 chr10 44068366 44068513 -96248252 + AluSg/x SINE Alu 143 291 -19 24 0 0 0 chr10 44068549 44068573 -96248192 + AT_rich Low_complexity Low_complexity 1 24 0 1339 244 58 25 chr10 44068578 44069030 -96247735 + L1MB8 LINE L1 5706 6171 -7 22 0 0 0 chr10 44070898 44070920 -96245845 + AT_rich Low_complexity Low_complexity 1 22 0 210 114 91 0 chr10 44071013 44071057 -96245708 + (TATTG)n Simple_repeat Simple_repeat 3 50 0 260 282 147 32 chr10 44071970 44072126 -96244639 + MIR SINE MIR 2 175 -87 274 262 0 0 chr10 44072545 44072606 -96244159 + MER4-int LTR ERV1 1101 1161 -5437 272 186 0 29 chr10 44072558 44072628 -96244137 + (TATG)n Simple_repeat Simple_repeat 1 68 0 * 1026 76 15 0 chr10 44073212 44073343 -96243422 - AluSq/x SINE Alu -179 133 1 2231 197 29 45 chr10 44073794 44074352 -96242413 - MER44D DNA MER2_type -1 604 1 371 350 86 17 chr10 44074431 44074722 -96242043 + L2 LINE L2 1366 1676 -1638 1430 197 130 19 chr10 44075928 44076360 -96240405 + MER21B LTR ERV1 375 854 -9 5437 155 18 38 chr10 44076691 44077760 -96239005 - THE1C-int LTR MaLR -531 1049 3 1126 177 80 47 chr10 44077762 44078061 -96238704 - THE1C LTR MaLR 0 375 67 289 291 103 0 chr10 44079472 44079589 -96237176 + MLT1D LTR MaLR 198 326 -179 1157 231 44 18 chr10 44079858 44080251 -96236514 + MER54B LTR ERVL 488 793 0 405 155 7 50 chr10 44080251 44080397 -96236368 + MLT1D LTR MaLR 322 505 0 1101 225 100 14 chr10 44080397 44080686 -96236079 + MLT1E2 LTR MaLR 271 584 -42 211 311 44 121 chr10 44080770 44081018 -96235747 + L2 LINE L2 2992 3220 -52 847 180 0 0 chr10 44081312 44081451 -96235314 + AluJo SINE Alu 1 139 -173 6959 163 28 26 chr10 44081551 44082959 -96233806 - L1P LINE L1 -4712 1434 24 4146 87 3 2 chr10 44083059 44083635 -96233130 + PABL_A LTR ERV1 84 660 0 26 64 0 0 chr10 44084453 44084500 -96232265 + AT_rich Low_complexity Low_complexity 1 47 0 2836 208 72 63 chr10 44086937 44088180 -96228585 + L1MDa LINE L1 2390 3646 -2894 858 311 47 12 chr10 44088334 44088759 -96228006 + MLT1L LTR MaLR 71 615 0 1027 227 10 75 chr10 44090129 44090424 -96226341 + MLT2B1 LTR ERVL 1 276 -244 225 274 71 19 chr10 44092184 44092396 -96224369 + L1MDa LINE L1 2331 2553 -3987 1004 266 78 56 chr10 44092407 44093135 -96223630 - L1M4 LINE L1 -1494 4652 3909 358 239 0 6 chr10 44093219 44093308 -96223457 - L1M4 LINE L1 -2265 3881 3797 22 70 0 0 chr10 44093706 44093749 -96223016 + AT_rich Low_complexity Low_complexity 1 43 0 1331 174 20 69 chr10 44093901 44094292 -96222473 - L1M4 LINE L1 -2272 3874 3503 285 265 152 15 chr10 44094428 44094560 -96222205 - MIR SINE MIR -17 245 96 22 80 0 0 chr10 44095281 44095331 -96221434 + AT_rich Low_complexity Low_complexity 1 50 0 1860 183 66 8 chr10 44096245 44096715 -96220050 + L1MB2 LINE L1 5673 6169 -2 838 207 25 5 chr10 44096940 44097138 -96219627 + Tigger1 DNA MER2_type 2216 2417 -1 1627 268 72 10 chr10 44097148 44098118 -96218647 + L1MDa LINE L1 2971 4000 -2540 228 86 0 0 chr10 44098136 44098171 -96218594 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2248 75 0 0 chr10 44098173 44098451 -96218314 - AluY SINE Alu -33 278 1 3213 93 8 41 chr10 44098574 44098752 -96218013 - THE1B-int LTR MaLR -1083 497 315 1782 163 0 11 chr10 44098752 44099029 -96217736 + AluSx SINE Alu 1 274 -38 873 29 0 0 chr10 44099030 44099134 -96217631 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 3213 93 8 41 chr10 44099134 44099467 -96217298 - THE1B-int LTR MaLR -1264 316 1 2142 120 50 36 chr10 44099467 44099826 -96216939 - THE1B LTR MaLR 0 364 1 1887 170 3 3 chr10 44099826 44100203 -96216562 - L1P LINE L1 -1624 4522 4146 521 298 67 22 chr10 44100501 44100947 -96215818 + L1ME LINE L1 3463 3941 -2205 1197 264 40 14 chr10 44100948 44101733 -96215032 + L1ME LINE L1 4710 5514 -648 803 201 6 6 chr10 44101739 44101913 -96214852 + MER3 DNA MER1_type 6 179 -30 228 244 0 101 chr10 44102010 44102129 -96214636 + L1ME LINE L1 5634 5740 -424 7065 104 15 3 chr10 44102255 44104086 -96212679 + L1PA7 LINE L1 4305 6154 0 423 286 52 9 chr10 44104086 44104429 -96212336 + L1M4 LINE L1 3085 3442 -2704 1409 159 5 9 chr10 44104437 44104657 -96212108 + AluSx SINE Alu 1 219 -93 14760 50 0 1 chr10 44104757 44106713 -96210052 + L1P LINE L1 2000 3954 -2192 342 0 0 0 chr10 44106848 44106886 -96209879 + (CA)n Simple_repeat Simple_repeat 1 38 0 2780 119 35 12 chr10 44107043 44107627 -96209138 - MER4E LTR ERV1 -4 762 1 257 316 0 0 chr10 44107913 44107970 -96208795 + L2 LINE L2 3255 3311 -2 1624 140 105 21 chr10 44108413 44108698 -96208067 - AluJb SINE Alu -3 309 1 745 232 113 54 chr10 44109100 44109672 -96207093 - MER115 DNA AcHobo 0 4031 1 2015 144 0 3 chr10 44110560 44110852 -96205913 - AluJb SINE Alu -21 291 1 186 205 217 24 chr10 44110984 44111067 -96205698 + L2 LINE L2 3215 3313 0 1689 167 3 3 chr10 44111139 44111421 -96205344 + AluSx SINE Alu 1 282 -30 1817 103 11 40 chr10 44112567 44112840 -96203925 - AluY SINE Alu -6 305 41 1563 78 16 0 chr10 44113678 44113743 -96203022 - AluSx SINE Alu -114 198 135 2322 88 3 19 chr10 44113743 44114060 -96202705 - AluSx SINE Alu 0 312 1 1563 78 16 0 chr10 44114060 44114187 -96202578 - AluSx SINE Alu -177 135 3 260 301 106 9 chr10 44114422 44114535 -96202230 + L2 LINE L2 3145 3268 -4 21 0 0 0 chr10 44115577 44115598 -96201167 + AT_rich Low_complexity Low_complexity 1 21 0 246 366 40 5 chr10 44115910 44116134 -96200631 + HAL1 LINE L1 1430 1661 -846 280 284 0 11 chr10 44116256 44116351 -96200414 + (TA)n Simple_repeat Simple_repeat 2 95 0 26 50 0 0 chr10 44116545 44116585 -96200180 + AT_rich Low_complexity Low_complexity 1 40 0 221 219 0 0 chr10 44116920 44116961 -96199804 + (TG)n Simple_repeat Simple_repeat 2 42 0 333 172 0 0 chr10 44118006 44118070 -96198695 + C-rich Low_complexity Low_complexity 5 68 0 1747 139 0 4 chr10 44118070 44118315 -96198450 - AluSx SINE Alu -32 280 37 212 264 0 0 chr10 44118359 44118431 -96198334 + CT-rich Low_complexity Low_complexity 1 72 0 600 260 27 7 chr10 44118659 44118809 -96197956 - MIR SINE MIR -108 154 2 518 258 56 11 chr10 44118926 44119104 -96197661 - LTR33A LTR ERVL -21 502 317 401 288 25 8 chr10 44119303 44119421 -96197344 - LTR33A LTR ERVL -349 174 55 2524 102 3 0 chr10 44119686 44120040 -96196725 - THE1A LTR MaLR 0 355 1 7194 106 9 5 chr10 44120040 44121092 -96195673 - THE1A-int LTR MaLR 0 1580 525 3119 120 17 9 chr10 44121232 44121766 -96194999 + L1MA2 LINE L1 5733 6270 -34 1220 242 101 11 chr10 44121914 44122290 -96194475 + MLT1J2 LTR MaLR 39 448 -2 2316 97 0 13 chr10 44122529 44122839 -96193926 - AluSx SINE Alu -6 306 1 496 248 13 46 chr10 44123386 44123539 -96193226 - MER5A DNA MER1_type -24 165 18 229 230 120 20 chr10 44123613 44123713 -96193052 + L1ME4a LINE L1 6007 6116 -5 313 279 18 0 chr10 44123841 44123952 -96192813 - L1MD3 LINE L1 -155 7840 7728 5228 135 29 23 chr10 44123967 44124755 -96192010 - L1PA15 LINE L1 -13 6152 5370 1889 123 69 4 chr10 44124755 44125032 -96191733 - AluSq SINE Alu -12 301 7 5228 135 29 23 chr10 44125032 44125259 -96191506 - L1PA15 LINE L1 -795 5370 5146 1664 158 88 0 chr10 44125259 44125531 -96191234 - AluJb SINE Alu -16 296 1 5228 135 29 23 chr10 44125531 44126272 -96190493 - L1PA15 LINE L1 -1019 5146 4383 590 321 48 16 chr10 44126947 44127258 -96189507 + MER110 LTR ERV1 164 484 -7 882 202 120 13 chr10 44127363 44127596 -96189169 + MLT1F1 LTR MaLR 310 567 0 227 173 19 0 chr10 44127861 44127913 -96188852 + CT-rich Low_complexity Low_complexity 2 54 0 1416 208 72 14 chr10 44127913 44128381 -96188384 - AluJo SINE Alu 0 312 1 1789 212 34 2 chr10 44128942 44129385 -96187380 - Charlie4a DNA MER1_type -2 506 50 2149 116 0 0 chr10 44129482 44129775 -96186990 + AluSx SINE Alu 1 293 -19 198 229 0 0 chr10 44130172 44130207 -96186558 - L2 LINE L2 -16 3297 3263 342 183 65 0 chr10 44130300 44130384 -96186381 - MIR SINE MIR -53 155 63 432 278 46 87 chr10 44130736 44130977 -96185788 - L2 LINE L2 -1 3312 3082 24 0 0 0 chr10 44131876 44131900 -96184865 + AT_rich Low_complexity Low_complexity 1 24 0 199 275 163 25 chr10 44131956 44132036 -96184729 + MIR SINE MIR 61 151 -57 1175 229 12 102 chr10 44132109 44132440 -96184325 - MLT1H LTR MaLR -146 403 113 1977 136 3 0 chr10 44132440 44132734 -96184031 - AluJb SINE Alu -7 305 11 1175 229 12 102 chr10 44132734 44132804 -96183961 - MLT1H LTR MaLR -436 113 38 397 292 9 0 chr10 44132836 44132949 -96183816 + MIR SINE MIR 138 251 -11 2412 88 0 0 chr10 44133279 44133586 -96183179 - AluY SINE Alu -4 307 1 4101 155 10 14 chr10 44134983 44135687 -96181078 + L1M3f LINE L1 3 703 -4625 978 215 36 0 chr10 44135712 44135935 -96180830 + L1M3f LINE L1 2620 2850 -3478 733 84 0 0 chr10 44136041 44136136 -96180629 - AluSc SINE Alu -63 246 152 221 282 70 0 chr10 44136556 44136627 -96180138 - MIR3 SINE MIR -23 185 110 254 241 0 0 chr10 44137333 44137391 -96179374 + L3 LINE CR1 403 460 -1117 182 345 21 48 chr10 44137557 44137702 -96179063 + L3 LINE CR1 667 807 -770 564 301 122 21 chr10 44137945 44138371 -96178394 + L3 LINE CR1 1032 1500 -77 243 262 66 49 chr10 44138968 44139090 -96177675 - MLT1F1 LTR MaLR -49 518 395 213 225 0 0 chr10 44139436 44139476 -96177289 + (CA)n Simple_repeat Simple_repeat 2 41 0 736 232 0 0 chr10 44140115 44140257 -96176508 + FRAM SINE Alu 5 146 -30 22 56 0 0 chr10 44140258 44140294 -96176471 + AT_rich Low_complexity Low_complexity 1 36 0 1541 194 0 0 chr10 44140364 44140616 -96176149 + AluJb SINE Alu 1 252 -60 756 206 24 30 chr10 44141041 44141206 -96175559 + FRAM SINE Alu 1 164 -2 24 32 0 0 chr10 44141206 44141237 -96175528 + AT_rich Low_complexity Low_complexity 1 31 0 586 112 43 3 chr10 44141607 44141809 -96174956 + LTR26 LTR ERV1 1 256 -347 906 146 0 14 chr10 44141809 44141953 -96174812 - FLAM_C SINE Alu 0 143 2 1840 183 0 55 chr10 44141954 44142336 -96174429 + LTR26 LTR ERV1 243 603 0 327 25 0 0 chr10 44142644 44142684 -96174081 + (TG)n Simple_repeat Simple_repeat 1 40 0 410 327 22 54 chr10 44142712 44142990 -96173775 + MLT1G LTR MaLR 16 284 -306 1127 225 60 62 chr10 44143171 44143442 -96173323 + MER74B LTR ERVL 238 509 -113 4758 147 13 13 chr10 44143442 44144268 -96172497 - LTR1B LTR ERV1 0 826 1 1127 225 60 62 chr10 44144268 44144382 -96172383 + MER74B LTR ERVL 509 622 0 405 283 113 13 chr10 44144382 44144541 -96172224 + MIR SINE MIR 35 209 -53 386 256 40 44 chr10 44144936 44145073 -96171692 + MIR SINE MIR 16 164 -63 213 125 104 0 chr10 44145231 44145279 -96171486 + CT-rich Low_complexity Low_complexity 1 53 0 906 186 38 6 chr10 44146211 44146394 -96170371 + MER5A DNA MER1_type 1 189 0 581 256 147 0 chr10 44146463 44146619 -96170146 - MER5A DNA MER1_type 0 189 11 614 219 52 0 chr10 44147083 44147238 -96169527 + MER63 DNA MER1_type 1 789 -273 5808 77 13 3 chr10 44147566 44148415 -96168350 + L1PB2 LINE L1 5293 6149 -2 489 233 170 4 chr10 44148604 44148760 -96168005 + MIR SINE MIR 19 196 -63 203 0 0 36 chr10 44149512 44149540 -96167225 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 915 219 39 84 chr10 44151044 44151415 -96165350 + MLT2B1 LTR ERVL 5 364 -50 380 20 20 0 chr10 44151504 44151553 -96165212 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 2197 94 0 27 chr10 44151558 44151855 -96164910 - AluSg SINE Alu -21 289 1 238 0 26 51 chr10 44151855 44151894 -96164871 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 218 310 11 11 chr10 44152016 44152103 -96164662 + (TA)n Simple_repeat Simple_repeat 2 88 0 398 289 108 10 chr10 44152241 44152435 -96164330 - LTR33A LTR ERVL -159 364 152 1289 254 58 69 chr10 44152754 44153203 -96163562 + MER45B DNA AcHobo 1 444 -596 2159 135 3 0 chr10 44153203 44153514 -96163251 + AluSx SINE Alu 1 312 0 218 288 38 12 chr10 44154885 44154965 -96161800 - L2 LINE L2 -5 3308 3227 1157 228 62 46 chr10 44155201 44155569 -96161196 - MLT1A2 LTR MaLR 0 374 1 183 390 24 0 chr10 44155744 44155826 -96160939 - MIR SINE MIR -60 148 65 290 223 36 18 chr10 44156016 44156128 -96160637 + (TA)n Simple_repeat Simple_repeat 1 114 0 967 236 16 42 chr10 44156131 44156440 -96160325 - L1MA9 LINE L1 -51 6261 5961 550 198 32 0 chr10 44156442 44156568 -96160197 + L1M2 LINE L1 5407 5536 -776 336 231 120 8 chr10 44156880 44156997 -96159768 + MER53 DNA DNA 1 130 -59 * 343 227 143 7 chr10 44156896 44157050 -96159715 - MER53 DNA DNA -7 182 8 271 220 0 0 chr10 44157238 44157297 -96159468 + L1MC5 LINE L1 6702 6760 -1201 594 217 0 109 chr10 44157576 44157806 -96158959 + L1MB8 LINE L1 2513 2717 -3429 2041 261 61 37 chr10 44159898 44160519 -96156246 + L1MB8 LINE L1 3497 4150 -1996 290 45 23 0 chr10 44160519 44160563 -96156202 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2041 261 61 37 chr10 44160563 44160885 -96155880 + L1MB8 LINE L1 4150 4463 -1683 1053 248 23 53 chr10 44160892 44161327 -96155438 + L1MB8 LINE L1 5757 6178 0 1191 275 41 47 chr10 44161348 44162057 -96154708 - L1M4 LINE L1 -912 5234 4530 315 118 101 109 chr10 44162070 44162189 -96154576 + L1M4 LINE L1 5514 5631 -553 1603 93 16 8 chr10 44162297 44162545 -96154220 - L1PA13 LINE L1 -152 6011 5762 294 192 0 0 chr10 44162545 44162597 -96154168 - MER5A DNA MER1_type -126 63 12 2329 82 3 0 chr10 44163434 44163728 -96153037 - AluSg SINE Alu -15 295 1 517 318 80 17 chr10 44163962 44164251 -96152514 - L2 LINE L2 -351 2963 2657 1904 169 7 0 chr10 44164966 44165268 -96151497 + AluJb SINE Alu 1 304 -8 804 211 14 0 chr10 44165682 44165829 -96150936 + MER5A DNA MER1_type 2 150 -39 5490 70 1 0 chr10 44166287 44167001 -96149764 - L1PA8 LINE L1 -1 6171 5457 244 111 44 0 chr10 44167001 44167046 -96149719 + Alu SINE Alu 250 296 -5 26 50 0 0 chr10 44167046 44167086 -96149679 + AT_rich Low_complexity Low_complexity 1 40 0 426 317 149 0 chr10 44167137 44167345 -96149420 + L1M4 LINE L1 3719 3957 -2189 1272 105 12 0 chr10 44167363 44167534 -96149231 + AluSg/x SINE Alu 130 302 -10 234 0 0 0 chr10 44167534 44167560 -96149205 + (TA)n Simple_repeat Simple_repeat 2 27 0 332 118 0 0 chr10 44167562 44167613 -96149152 + L1PA16 LINE L1 6106 6156 -10 848 153 0 0 chr10 44167934 44168058 -96148707 + FLAM_C SINE Alu 1 124 -19 35 24 0 0 chr10 44168059 44168101 -96148664 + AT_rich Low_complexity Low_complexity 1 42 0 282 235 104 9 chr10 44168189 44168304 -96148461 + MIR SINE MIR 83 208 -54 542 197 33 53 chr10 44169098 44169250 -96147515 + MER5A DNA MER1_type 40 188 -1 279 239 12 42 chr10 44169932 44170099 -96146666 + CT-rich Low_complexity Low_complexity 4 165 0 31 0 0 0 chr10 44170550 44170581 -96146184 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 44170732 44170753 -96146012 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 868 180 130 10 chr10 44171889 44172089 -96144676 + MER58A DNA MER1_type 1 224 0 2453 73 0 3 chr10 44172163 44172466 -96144299 - AluSp SINE Alu -11 302 1 1334 248 35 0 chr10 44172500 44172790 -96143975 - AluJb SINE Alu -10 302 3 2393 65 7 0 chr10 44173554 44173846 -96142919 + AluY SINE Alu 1 294 -17 357 131 213 0 chr10 44174330 44174391 -96142374 + FRAM/FAM SINE Alu 10 83 -83 3220 94 0 7 chr10 44174493 44174938 -96141827 - THE1B-int LTR MaLR -1138 442 1 2238 148 34 14 chr10 44174938 44175295 -96141470 - THE1B LTR MaLR 0 364 1 1739 235 83 58 chr10 44176025 44177405 -96139360 + L1MD3 LINE L1 4742 5403 -743 22 35 0 0 chr10 44177697 44177726 -96139039 + AT_rich Low_complexity Low_complexity 1 29 0 266 276 76 35 chr10 44177782 44177927 -96138838 + L1ME4a LINE L1 5527 5677 -444 * 1606 249 53 9 chr10 44177926 44178478 -96138287 - L1ME LINE L1 -396 5768 5190 1622 124 31 10 chr10 44178505 44178795 -96137970 - L1MA9 LINE L1 -24 6288 5993 345 210 62 51 chr10 44178818 44178994 -96137771 + L1ME4a LINE L1 5706 5883 -238 200 35 35 0 chr10 44179228 44179257 -96137508 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1470 159 21 46 chr10 44179261 44179544 -96137221 - AluJb SINE Alu -36 276 1 21 0 0 0 chr10 44179839 44179860 -96136905 + AT_rich Low_complexity Low_complexity 1 21 0 428 390 20 17 chr10 44180252 44180547 -96136218 + L2 LINE L2 2430 2725 -589 507 297 45 77 chr10 44182108 44182445 -96134320 + MLT1K LTR MaLR 162 483 -105 2380 172 6 94 chr10 44182445 44182957 -96133808 + LTR24 LTR ERV1 1 467 0 507 297 45 77 chr10 44182957 44183060 -96133705 + MLT1K LTR MaLR 483 588 0 1701 213 63 15 chr10 44183669 44184216 -96132549 - MER67C LTR ERV1 0 514 1 35 71 0 0 chr10 44184216 44184286 -96132479 + AT_rich Low_complexity Low_complexity 1 70 0 3098 111 12 7 chr10 44184738 44185170 -96131595 - MER57B LTR ERV1 0 434 1 1046 209 0 47 chr10 44185201 44185436 -96131329 + AluJo SINE Alu 1 224 -88 30 59 0 0 chr10 44185563 44185614 -96131151 + AT_rich Low_complexity Low_complexity 1 51 0 2296 120 0 0 chr10 44185923 44186232 -96130533 - AluSc SINE Alu 0 309 1 1675 92 0 34 chr10 44186670 44186909 -96129856 - AluSx SINE Alu -38 274 44 2007 145 0 3 chr10 44186914 44187204 -96129561 - AluSx SINE Alu -23 289 1 221 0 0 33 chr10 44187216 44187246 -96129519 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2127 89 7 0 chr10 44187255 44187526 -96129239 - AluSg SINE Alu -37 273 1 2019 130 3 7 chr10 44188336 44188643 -96128122 - AluSx SINE Alu -6 306 1 450 344 73 13 chr10 44190995 44191297 -96125468 - MARNA DNA Mariner -117 469 150 333 184 253 0 chr10 44191337 44191424 -96125341 + MER5A DNA MER1_type 4 112 -77 2269 100 0 3 chr10 44192303 44192593 -96124172 + AluSx SINE Alu 9 297 -15 198 0 0 0 chr10 44192787 44192809 -96123956 + (T)n Simple_repeat Simple_repeat 1 22 0 275 355 50 8 chr10 44196259 44196380 -96120385 + MIR3 SINE MIR 34 159 -49 249 368 83 15 chr10 44197100 44197233 -96119532 - MER91A DNA MER1_type -17 179 38 1893 207 23 27 chr10 44197441 44198133 -96118632 - L1MC/D LINE L1 -729 5630 4937 2177 125 0 0 chr10 44198133 44198429 -96118336 - AluSx SINE Alu -16 296 1 1893 207 23 27 chr10 44198429 44198478 -96118287 - L1MC/D LINE L1 -1422 4937 4889 2288 121 0 0 chr10 44198515 44198822 -96117943 - AluSx SINE Alu 0 312 6 404 324 62 0 chr10 44199118 44199263 -96117502 + MIR3 SINE MIR 30 183 -25 471 261 42 28 chr10 44199952 44200094 -96116671 - MER5A DNA MER1_type 0 189 46 328 304 87 37 chr10 44199956 44200117 -96116648 + MER5A DNA MER1_type 18 186 -3 * 302 327 170 22 chr10 44200478 44200790 -96115975 + L2 LINE L2 2487 2844 -470 2549 118 28 3 chr10 44200827 44201182 -96115583 - THE1B LTR MaLR 0 364 1 2070 150 0 0 chr10 44201480 44201780 -96114985 - AluSx SINE Alu -12 300 1 2405 93 0 6 chr10 44201845 44202157 -96114608 - AluSg SINE Alu 0 310 1 282 292 10 31 chr10 44202183 44202279 -96114486 - L2 LINE L2 -2 3311 3218 7268 66 2 2 chr10 44202855 44204445 -96112320 + L1PA7 LINE L1 4572 6170 0 21132 147 16 22 chr10 44204445 44207756 -96109009 - L1P3 LINE L1 -1574 4887 1560 2004 145 30 0 chr10 44207756 44208059 -96108706 - AluSq SINE Alu -1 312 1 21132 147 16 22 chr10 44208059 44209515 -96107250 - L1P3 LINE L1 -4901 1560 81 344 95 0 16 chr10 44209515 44209578 -96107187 + (TTA)n Simple_repeat Simple_repeat 2 63 0 21132 147 16 22 chr10 44209578 44209659 -96107106 - L1P3 LINE L1 -6380 81 1 1246 106 0 0 chr10 44210497 44210667 -96106098 - L1MA2 LINE L1 -1 6303 6134 243 286 161 12 chr10 44211209 44211341 -96105424 - MIR SINE MIR -69 139 11 2143 103 7 3 chr10 44211450 44211740 -96105025 + AluSx SINE Alu 1 291 -21 284 197 17 34 chr10 44212846 44212963 -96103802 + GA-rich Low_complexity Low_complexity 4 118 0 435 319 71 14 chr10 44212991 44213201 -96103564 - MIR SINE MIR -6 256 35 265 221 39 0 chr10 44214034 44214111 -96102654 + MER94 DNA DNA 55 134 0 2715 19 7 3 chr10 44214211 44214520 -96102245 - AluY SINE Alu -1 310 1 604 234 42 26 chr10 44214545 44214737 -96102028 - L1ME3 LINE L1 -9 6153 5959 1990 173 36 0 chr10 44215325 44215661 -96101104 + MER7A DNA MER2_type 1 346 0 205 282 165 12 chr10 44216286 44216371 -96100394 - MIR SINE MIR -52 210 113 265 219 24 61 chr10 44216523 44216605 -96100160 - L2 LINE L2 -1 3271 3193 285 227 64 0 chr10 44219108 44219218 -96097547 + L1M4 LINE L1 3115 3231 -2915 318 50 0 0 chr10 44219896 44219936 -96096829 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 366 345 62 11 chr10 44220149 44220326 -96096439 - L2 LINE L2 -8 3264 3079 336 266 73 0 chr10 44220436 44220560 -96096205 + MER94 DNA DNA 2 134 0 1662 165 52 13 chr10 44220661 44220970 -96095795 - L1MB2 LINE L1 -3 6168 5848 415 158 32 42 chr10 44221425 44221520 -96095245 + L1MA4A LINE L1 6210 6303 0 16447 88 13 1 chr10 44221521 44224785 -96091980 - L1PA7 LINE L1 -11 6458 3167 6666 97 21 4 chr10 44224783 44225713 -96091052 - L1PA7 LINE L1 -5515 946 1 * 354 61 0 0 chr10 44225781 44225830 -96090935 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 215 271 117 75 chr10 44226037 44226225 -96090540 - L2 LINE L2 0 3313 3118 212 318 163 23 chr10 44226664 44226793 -96089972 + MIR SINE MIR 46 192 -70 273 306 109 11 chr10 44227381 44227564 -96089201 + MIR SINE MIR 54 254 -8 201 366 65 0 chr10 44227617 44227740 -96089025 - MIR SINE MIR -109 153 23 6946 69 12 0 chr10 44227798 44228911 -96087854 - L1PA8 LINE L1 0 6172 5058 3304 127 10 4 chr10 44229896 44230410 -96086355 + L1PB1 LINE L1 5635 6151 0 2134 93 0 0 chr10 44231234 44231502 -96085263 + AluSg SINE Alu 34 301 -9 186 43 0 0 chr10 44232724 44232747 -96084018 + (CA)n Simple_repeat Simple_repeat 1 23 0 1360 192 98 1 chr10 44233781 44234098 -96082667 - L1MD2 LINE L1 0 6359 5986 1872 175 25 28 chr10 44234179 44234533 -96082232 + MLT1A1 LTR MaLR 13 365 0 650 203 52 0 chr10 44235395 44235548 -96081217 - MIR SINE MIR -38 224 64 1756 216 14 6 chr10 44237833 44238199 -96078566 - MLT1F1 LTR MaLR 0 567 199 2049 230 157 0 chr10 44238203 44238759 -96078006 + MLT1E1 LTR MaLR 12 654 0 481 245 88 7 chr10 44238759 44238905 -96077860 - MLT1F1 LTR MaLR -409 158 1 1946 107 11 18 chr10 44240176 44240448 -96076317 - AluSx SINE Alu -9 303 34 461 258 67 27 chr10 44240930 44241095 -96075670 - MIR SINE MIR -58 204 34 762 246 118 57 chr10 44241400 44241840 -96074925 + MLT1C LTR MaLR 1 467 0 1044 210 15 10 chr10 44242269 44242474 -96074291 + AluJo SINE Alu 88 293 -19 6455 110 13 14 chr10 44242476 44243658 -96073107 + L1P3 LINE L1 856 2038 -4423 45111 40 0 1 chr10 44243661 44249815 -96066950 + L1PA3 LINE L1 7 6155 0 313 211 90 64 chr10 44249817 44249973 -96066792 - L1MD2 LINE L1 -2393 5415 5256 329 247 28 28 chr10 44249999 44250181 -96066584 - L1MD2 LINE L1 -922 5224 5043 225 0 0 0 chr10 44250181 44250206 -96066559 + (A)n Simple_repeat Simple_repeat 1 25 0 4890 125 4 20 chr10 44250206 44251089 -96065676 + L1PA7 LINE L1 2022 2857 -3604 11230 88 9 21 chr10 44251089 44253083 -96063682 + L1PA7 LINE L1 4148 6133 -336 2398 83 0 0 chr10 44253083 44253385 -96063380 - AluY SINE Alu -9 302 1 11230 88 9 21 chr10 44253385 44253716 -96063049 + L1PA7 LINE L1 6133 6466 -3 1638 176 59 90 chr10 44253881 44254471 -96062294 + L1MDa LINE L1 1262 1833 -4707 999 182 73 5 chr10 44254446 44254666 -96062099 + L1MDa LINE L1 2037 2271 -4269 * 8184 13 0 1 chr10 44254667 44255960 -96060805 - L1HS LINE L1 0 6155 4864 442 258 6 50 chr10 44256048 44256207 -96060558 + L1MD2 LINE L1 6191 6342 -17 228 282 17 17 chr10 44256326 44256443 -96060322 + L1MDa LINE L1 3745 3861 -2679 467 164 10 0 chr10 44256955 44257059 -96059706 + G-rich Low_complexity Low_complexity 2 106 0 256 299 116 14 chr10 44257860 44258007 -96058758 - MIR SINE MIR -76 186 25 206 336 15 15 chr10 44260490 44260621 -96056144 + CT-rich Low_complexity Low_complexity 2 132 0 31 0 0 0 chr10 44261444 44261475 -96055290 + AT_rich Low_complexity Low_complexity 1 31 0 184 296 0 0 chr10 44262576 44262630 -96054135 + L2 LINE L2 3206 3259 -13 21 36 0 0 chr10 44262876 44262904 -96053861 + AT_rich Low_complexity Low_complexity 1 28 0 530 124 11 0 chr10 44264036 44264125 -96052640 + (TA)n Simple_repeat Simple_repeat 2 91 0 2059 271 53 33 chr10 44264125 44264995 -96051770 - L1MCc LINE L1 -4322 2800 1914 * 35991 108 8 9 chr10 44264985 44271133 -96045632 - L1PA7 LINE L1 0 6154 11 1036 278 51 27 chr10 44271144 44271799 -96044966 - L1MCc LINE L1 -4891 1532 1051 754 251 46 34 chr10 44272765 44273028 -96043737 + MER65B LTR ERV1 53 318 -213 3128 151 18 6 chr10 44273083 44273587 -96043178 - L1PA15 LINE L1 -21 6144 5635 302 132 57 0 chr10 44273605 44273658 -96043107 + L1P4 LINE L1 5643 5698 -467 2529 114 13 15 chr10 44274459 44275097 -96041668 - L1PA15 LINE L1 -547 5618 4980 896 197 5 26 chr10 44275090 44275283 -96041482 + MER65B LTR ERV1 336 524 -7 * 571 241 98 25 chr10 44275292 44275537 -96041228 - L1MCc LINE L1 -6128 295 33 1736 206 105 33 chr10 44276316 44276743 -96040022 - MLT1C LTR MaLR -6 461 4 474 325 24 5 chr10 44277070 44277276 -96039489 - L2 LINE L2 -300 3013 2804 305 152 30 0 chr10 44277776 44277842 -96038923 + GA-rich Low_complexity Low_complexity 4 71 0 352 280 70 20 chr10 44278045 44278245 -96038520 + L1MCa LINE L1 996 1205 -5221 35886 106 10 9 chr10 44278256 44284391 -96032374 + L1PA6 LINE L1 11 6149 -5 6928 151 68 7 chr10 44284436 44285623 -96031142 - HSMAR2 DNA Mariner -1 1301 42 204 40 0 0 chr10 44285630 44285655 -96031110 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 606 127 28 21 chr10 44285655 44285797 -96030968 + CT-rich Low_complexity Low_complexity 1 143 0 1323 179 0 60 chr10 44285804 44286055 -96030710 - AluJo SINE Alu -39 273 38 2200 261 87 19 chr10 44286068 44287040 -96029725 + L1MCa LINE L1 1126 2031 -4395 1699 65 0 14 chr10 44287040 44287256 -96029509 + AluSg/x SINE Alu 96 308 -1 2200 261 87 19 chr10 44287256 44288133 -96028632 + L1MCa LINE L1 2031 3205 -3221 1858 169 57 35 chr10 44288126 44288569 -96028196 + L1MB7 LINE L1 5720 6169 -15 * 1936 257 60 19 chr10 44288631 44289200 -96027565 + L1MDb LINE L1 28 619 -5790 549 313 31 21 chr10 44289213 44289405 -96027360 + L1MDb LINE L1 463 656 -5753 227 243 34 182 chr10 44289514 44289662 -96027103 + L1MDb LINE L1 482 607 -5802 788 167 108 0 chr10 44289739 44289925 -96026840 + L1MDb LINE L1 721 926 -5483 293 98 0 0 chr10 44289964 44290005 -96026760 - MLT2D LTR ERVL 0 520 480 420 37 0 0 chr10 44290005 44290059 -96026706 + (TG)n Simple_repeat Simple_repeat 1 54 0 469 208 67 8 chr10 44290069 44290189 -96026576 + L1MDb LINE L1 182 308 -6101 276 137 42 21 chr10 44290207 44290302 -96026463 + (TA)n Simple_repeat Simple_repeat 1 97 0 1840 222 8 10 chr10 44290302 44290684 -96026081 - MLT2D LTR ERVL -40 480 1 1812 215 14 15 chr10 44290684 44291203 -96025562 + L1MDb LINE L1 975 1507 -4899 2001 163 30 22 chr10 44291203 44291479 -96025286 - MLT1A1 LTR MaLR 0 365 84 1171 227 104 48 chr10 44291479 44291854 -96024911 + MSTD LTR MaLR 1 396 0 2001 163 30 22 chr10 44291854 44291939 -96024826 - MLT1A1 LTR MaLR -281 84 1 563 243 70 0 chr10 44291939 44292124 -96024641 + L1MDb LINE L1 1503 1700 -4706 219 271 243 14 chr10 44292786 44292930 -96023835 + MIR SINE MIR 21 197 -65 237 143 0 0 chr10 44293793 44293828 -96022937 - U2 snRNA snRNA -152 36 2 405 289 39 32 chr10 44294561 44294717 -96022048 - MIR SINE MIR -67 195 39 2215 117 0 10 chr10 44297125 44297451 -96019314 + AluSx SINE Alu 1 312 0 234 0 0 0 chr10 44297616 44297642 -96019123 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 184 328 43 9 chr10 44299173 44299289 -96017476 + MIR SINE MIR 20 139 -123 14409 126 22 7 chr10 44301925 44304056 -96012709 - L1PB1 LINE L1 -4 6863 4765 3771 103 2 4 chr10 44304056 44304568 -96012197 + MER9 LTR ERVK 1 511 0 14409 126 22 7 chr10 44304568 44304862 -96011903 - L1PB1 LINE L1 -2102 4765 4477 246 32 0 0 chr10 44304862 44304893 -96011872 + (TTG)n Simple_repeat Simple_repeat 3 33 0 14409 126 22 7 chr10 44304893 44305274 -96011491 - L1PB1 LINE L1 -2390 4477 4103 1705 139 4 0 chr10 44305274 44305526 -96011239 - AluSg SINE Alu -4 306 54 14409 126 22 7 chr10 44305526 44308237 -96008528 - L1PB1 LINE L1 -2764 4103 995 1266 131 0 0 chr10 44308233 44308431 -96008334 - L1PB1 LINE L1 -6665 198 1 * 259 294 56 42 chr10 44309923 44310137 -96006628 + L2 LINE L2 2852 3068 -204 227 295 19 0 chr10 44310242 44310347 -96006418 + L2 LINE L2 1596 1702 -1612 222 239 14 14 chr10 44310438 44310509 -96006256 + L2 LINE L2 1716 1786 -1528 343 315 160 28 chr10 44310698 44311168 -96005597 + L2 LINE L2 2727 3259 -54 387 0 0 0 chr10 44312430 44312473 -96004292 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 322 70 9 chr10 44313692 44313807 -96002958 + MIR3 SINE MIR 15 136 -72 238 280 41 12 chr10 44314170 44314272 -96002493 + MIR SINE MIR 48 152 -58 367 231 115 0 chr10 44314359 44314463 -96002302 + L1MCa LINE L1 2092 2207 -4219 * 10284 36 0 0 chr10 44314459 44315670 -96001095 - L1P LINE L1 -1054 5092 3882 7862 23 0 1 chr10 44315678 44316618 -96000147 + L1PA3 LINE L1 5254 6155 0 682 207 116 4 chr10 44316618 44316860 -95999905 + L1MCa LINE L1 2197 2465 -3961 419 197 0 0 chr10 44316865 44316931 -95999834 + AluJ/FRAM SINE Alu 216 281 -31 6103 241 57 40 chr10 44316932 44319206 -95997559 + L1MCa LINE L1 2495 4806 -1620 1146 138 5 32 chr10 44319223 44319411 -95997354 - MER1B DNA MER1_type -16 323 141 187 93 47 23 chr10 44319563 44319606 -95997159 + A-rich Low_complexity Low_complexity 1 44 0 465 162 40 0 chr10 44319607 44319681 -95997084 + MLT1D LTR MaLR 353 429 -76 * 768 163 14 35 chr10 44319679 44319820 -95996945 - MER1B DNA MER1_type -158 139 2 1672 229 22 64 chr10 44319823 44320325 -95996440 + L1MCa LINE L1 4809 5289 -1137 728 152 76 21 chr10 44320325 44320470 -95996295 - MLT1D LTR MaLR 0 505 353 187 93 47 23 chr10 44320471 44320514 -95996251 + T-rich Low_complexity Low_complexity 1 44 0 300 195 183 12 chr10 44320626 44320708 -95996057 - MLT1E2 LTR MaLR -530 96 1 525 189 27 149 chr10 44320709 44320931 -95995834 - MLT1E2-int LTR MaLR -1 1370 1176 1801 217 27 18 chr10 44320947 44321394 -95995371 + L1MC3 LINE L1 5913 6363 -1422 2661 104 12 17 chr10 44321394 44321798 -95994967 - L1PA10 LINE L1 0 6168 5767 22233 105 11 39 chr10 44321798 44328216 -95988549 - L1PA7 LINE L1 0 6154 12 9281 123 21 10 chr10 44328227 44328517 -95988248 - L1PA10 LINE L1 -387 5781 5496 2138 72 0 19 chr10 44328517 44328782 -95987983 - AluY SINE Alu -17 294 35 9281 123 21 10 chr10 44328782 44330433 -95986332 - L1PA10 LINE L1 -672 5496 3825 5854 208 50 29 chr10 44330435 44331838 -95984927 + L1MC3 LINE L1 6353 7785 0 344 337 41 0 chr10 44333199 44333368 -95983397 - MIR3 SINE MIR -11 197 22 242 208 31 123 chr10 44334055 44334185 -95982580 - MIR SINE MIR -110 152 35 386 316 77 5 chr10 44334551 44334747 -95982018 - MIR SINE MIR -29 233 24 2056 120 24 0 chr10 44334803 44335094 -95981671 - AluSx SINE Alu -14 298 1 221 335 4 89 chr10 44335897 44335989 -95980776 + L2 LINE L2 2553 2651 -663 1265 208 38 119 chr10 44335989 44336495 -95980270 + MLT1C LTR MaLR 1 465 -2 221 335 4 89 chr10 44336495 44336659 -95980106 + L2 LINE L2 2651 2787 -527 4071 158 23 12 chr10 44337615 44338343 -95978422 - L1MB3 LINE L1 -1 6182 5447 2058 231 49 28 chr10 44339481 44339988 -95976777 + LTR40a LTR ERVL 2 519 0 227 321 37 0 chr10 44340512 44340593 -95976172 + MER91A DNA MER1_type 105 188 -8 927 282 91 43 chr10 44340997 44341415 -95975350 + L2 LINE L2 2872 3309 -4 560 210 36 67 chr10 44342622 44342846 -95973919 + MER20 DNA MER1_type 1 217 -2 188 258 54 65 chr10 44342911 44343004 -95973761 - MIR SINE MIR -91 171 80 456 263 158 24 chr10 44343113 44343691 -95973074 - L2 LINE L2 -12 3301 2654 449 291 148 40 chr10 44344631 44344982 -95971783 + Charlie8 DNA MER1_type 91 479 -1938 2412 101 0 0 chr10 44345415 44345721 -95971044 - AluSg SINE Alu -4 306 1 497 148 19 37 chr10 44347042 44347150 -95969615 - L1MB8 LINE L1 0 6178 6073 715 166 152 0 chr10 44347170 44347315 -95969450 - L1MB8 LINE L1 -193 5985 5819 * 2488 192 19 15 chr10 44347313 44347838 -95968927 + L1MB7 LINE L1 5614 6140 -44 2183 120 0 0 chr10 44347839 44348130 -95968635 - AluSq SINE Alu -22 291 1 2193 268 82 24 chr10 44348231 44349092 -95967673 + L1MDb LINE L1 10 920 -5489 275 236 94 9 chr10 44349199 44349305 -95967460 - L1ME4a LINE L1 0 6121 6007 201 154 0 0 chr10 44349307 44349346 -95967419 + (TATG)n Simple_repeat Simple_repeat 2 40 0 194 151 0 94 chr10 44349572 44349625 -95967140 + L2 LINE L2 3265 3312 -1 22 0 0 0 chr10 44351513 44351535 -95965230 + AT_rich Low_complexity Low_complexity 1 22 0 293 319 119 8 chr10 44352409 44352660 -95964105 - L2 LINE L2 -912 2402 2124 1887 217 31 117 chr10 44352918 44353714 -95963051 + L1M4 LINE L1 485 1212 -5330 31 0 0 0 chr10 44353748 44353779 -95962986 + AT_rich Low_complexity Low_complexity 1 31 0 346 197 26 0 chr10 44353788 44353864 -95962901 + L1M4 LINE L1 1217 1294 -5248 14744 136 10 21 chr10 44353873 44356250 -95960515 + L1PA6 LINE L1 11 2361 -3785 38188 34 25 1 chr10 44356375 44361811 -95954954 - L1PA2 LINE L1 -6 6464 893 625 56 0 0 chr10 44361778 44361876 -95954889 - L1PA2 LINE L1 -6081 380 11 * 22443 76 3 0 chr10 44362079 44365863 -95950902 + L1PA6 LINE L1 2349 6149 -5 6928 151 68 7 chr10 44365907 44367094 -95949671 - HSMAR2 DNA Mariner -1 1301 42 204 40 0 0 chr10 44367101 44367126 -95949639 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 606 127 28 21 chr10 44367126 44367268 -95949497 + CT-rich Low_complexity Low_complexity 1 143 0 1323 179 0 60 chr10 44367275 44367526 -95949239 - AluJo SINE Alu -39 273 38 2152 257 83 20 chr10 44367539 44368511 -95948254 + L1M4 LINE L1 1344 2253 -4391 1699 65 0 14 chr10 44368511 44368727 -95948038 + AluSg/x SINE Alu 96 308 -1 2152 257 83 20 chr10 44368727 44369604 -95947161 + L1M4 LINE L1 2253 3423 -3221 1730 193 46 24 chr10 44369597 44370040 -95946725 + L1MB7 LINE L1 5720 6169 -15 * 5458 202 39 23 chr10 44370413 44371815 -95944950 - L1MB7 LINE L1 0 6184 4734 2931 7 0 0 chr10 44371815 44372124 -95944641 - AluYb8 SINE Alu -9 309 1 5458 202 39 23 chr10 44372124 44372929 -95943836 - L1MB7 LINE L1 -1450 4734 3943 1748 251 108 15 chr10 44372971 44373952 -95942813 + L1MD2 LINE L1 1865 2940 -3600 5543 178 44 47 chr10 44373958 44375354 -95941411 + L1MD2 LINE L1 5358 6753 0 188 258 43 21 chr10 44376158 44376251 -95940514 + MIR SINE MIR 81 175 -87 241 257 50 50 chr10 44377581 44377682 -95939083 - MIR SINE MIR -73 135 35 246 298 165 11 chr10 44377867 44378055 -95938710 - L2 LINE L2 -38 3234 3018 1112 148 189 65 chr10 44380288 44380637 -95936128 + L1MA8 LINE L1 5921 6312 0 376 176 132 11 chr10 44381295 44381386 -95935379 - MIR SINE MIR -3 259 158 2129 145 36 38 chr10 44381526 44381891 -95934874 - THE1B LTR MaLR 0 364 1 199 314 0 0 chr10 44381929 44381980 -95934785 - MIR SINE MIR -59 149 99 2982 174 75 84 chr10 44383981 44384692 -95932073 + MER44D DNA MER2_type 1 704 -1 275 219 14 27 chr10 44384720 44384793 -95931972 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 50 59 0 0 chr10 44384793 44384878 -95931887 + AT_rich Low_complexity Low_complexity 1 85 0 203 325 51 84 chr10 44385025 44385320 -95931445 + L3 LINE CR1 858 1161 -416 183 42 0 0 chr10 44385320 44385344 -95931421 + (CCAA)n Simple_repeat Simple_repeat 2 25 0 203 325 51 84 chr10 44385344 44385626 -95931139 + L3 LINE CR1 1161 1469 -108 319 278 102 19 chr10 44386082 44386190 -95930575 - MIR SINE MIR -33 229 113 719 297 47 4 chr10 44388259 44388491 -95928274 - MLT1H1 LTR MaLR -12 543 302 317 253 49 11 chr10 44388555 44388674 -95928091 - MLT1G LTR MaLR -358 191 32 740 256 163 13 chr10 44388777 44389004 -95927761 - MIR SINE MIR 0 262 2 346 211 156 0 chr10 44389199 44389289 -95927476 - MLT1H1 LTR MaLR 0 555 452 361 278 62 64 chr10 44389336 44389603 -95927162 - MLT1H1 LTR MaLR -249 306 26 607 289 168 38 chr10 44389992 44390338 -95926427 - MLT1J2 LTR MaLR -59 391 1 299 260 41 32 chr10 44390345 44390468 -95926297 + MIR SINE MIR 84 207 -55 24 53 0 0 chr10 44390577 44390615 -95926150 + AT_rich Low_complexity Low_complexity 1 38 0 516 319 113 0 chr10 44390636 44390821 -95925944 - MIR SINE MIR -51 211 6 1519 115 10 0 chr10 44390898 44391107 -95925658 - AluSp SINE Alu -14 299 89 4162 216 73 117 chr10 44391384 44391655 -95925110 - L1MD2 LINE L1 -3 6356 6075 2713 129 21 0 chr10 44391655 44392035 -95924730 + MLT1B LTR MaLR 1 388 -2 4162 216 73 117 chr10 44392035 44392344 -95924421 - L1MD2 LINE L1 -284 6075 5754 306 182 91 80 chr10 44392344 44392432 -95924333 - MLT1F1 LTR MaLR -444 123 35 4162 216 73 117 chr10 44392432 44393177 -95923588 - L1MD2 LINE L1 -605 5754 6666 13396 51 9 1 chr10 44393177 44395538 -95921227 - L1PA5 LINE L1 -7 6147 3773 4162 216 73 117 chr10 44395538 44396863 -95919902 - L1MD2 LINE L1 308 6667 5285 4162 239 33 53 chr10 44396875 44398447 -95918318 - L1MB5 LINE L1 -8 6402 5082 2258 112 0 3 chr10 44398447 44398751 -95918014 - AluSp SINE Alu -10 303 1 4162 239 33 53 chr10 44398751 44400206 -95916559 - L1MB5 LINE L1 -1328 5082 3600 1777 175 3 7 chr10 44400276 44400573 -95916192 - MSTB LTR MaLR 0 426 131 842 265 12 0 chr10 44400599 44400848 -95915917 + L1M4 LINE L1 2631 2882 -3264 251 61 0 0 chr10 44400855 44400888 -95915877 - MSTB LTR MaLR -321 136 104 1900 204 55 9 chr10 44400891 44401485 -95915280 - L1MB5 LINE L1 -3800 2582 1964 1998 233 42 20 chr10 44401488 44401615 -95915150 - L1MB5 LINE L1 -4747 1637 1514 1737 208 91 10 chr10 44401615 44402009 -95914756 - MSTB LTR MaLR 0 426 1 1998 233 42 20 chr10 44402009 44402473 -95914292 - L1MB5 LINE L1 -4870 1514 1033 802 246 78 33 chr10 44402777 44403208 -95913557 + L1M4c LINE L1 554 1197 -5083 2391 90 3 0 chr10 44403249 44403550 -95913215 - AluSp SINE Alu 0 313 12 4284 249 47 26 chr10 44403585 44404474 -95912291 - L1MDb LINE L1 -3400 3140 2271 6552 25 1 0 chr10 44404474 44405195 -95911570 - L1PA2 LINE L1 0 6155 5434 4284 249 47 26 chr10 44405195 44406577 -95910188 - L1MDb LINE L1 -4269 2271 825 301 239 42 0 chr10 44406934 44407005 -95909760 - L1MDb LINE L1 -6140 403 330 668 320 26 4 chr10 44407424 44407693 -95909072 - L1MDb LINE L1 -6200 340 66 21 0 0 0 chr10 44408008 44408029 -95908736 + AT_rich Low_complexity Low_complexity 1 21 0 1023 241 94 0 chr10 44408209 44408475 -95908290 - L1MDb LINE L1 -5369 1040 750 2261 162 26 26 chr10 44408573 44409031 -95907734 - L1MB3 LINE L1 -15 6168 5711 452 222 8 43 chr10 44409037 44409154 -95907611 - L1MD1 LINE L1 -20 6222 6110 3423 202 35 3 chr10 44409216 44409910 -95906855 - L1MD1 LINE L1 -114 6128 5413 6150 182 36 23 chr10 44409915 44410545 -95906220 - L1PA16 LINE L1 -6 6160 5540 2179 107 7 0 chr10 44410545 44410843 -95905922 - AluY SINE Alu -11 300 1 6150 182 36 23 chr10 44410843 44412396 -95904369 - L1PA16 LINE L1 -626 5540 3951 207 0 0 0 chr10 44412442 44412465 -95904300 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6911 23 16 0 chr10 44412465 44413255 -95903510 - L1PA4 LINE L1 -5 6150 5348 4416 247 25 5 chr10 44413265 44414410 -95902355 - L1PA16 LINE L1 -2191 3955 2788 451 227 58 35 chr10 44414429 44414601 -95902164 - L1MD1 LINE L1 -2313 3833 3658 882 254 0 23 chr10 44414645 44414865 -95901900 - L1MD1 LINE L1 -3365 2781 2567 6950 254 39 31 chr10 44414875 44417514 -95899251 - L1MDa LINE L1 -746 5794 3136 653 159 0 63 chr10 44417514 44417640 -95899125 + FLAM_C SINE Alu 21 138 -5 1527 232 23 31 chr10 44417642 44418120 -95898645 - L1MDa LINE L1 -3391 3149 2693 444 247 11 0 chr10 44418121 44418210 -95898555 - Tigger5 DNA MER2_type 0 2323 2234 234 226 38 0 chr10 44418211 44418264 -95898501 - Tigger5 DNA MER2_type -2268 55 1 5041 173 72 22 chr10 44418264 44419475 -95897290 - L1MDa LINE L1 -3869 2671 1403 2024 122 131 19 chr10 44419479 44419983 -95896782 + MER51A LTR ERV1 1 625 -9 2748 258 114 31 chr10 44420012 44421188 -95895577 - L1MDa LINE L1 -5155 1385 18 292 163 0 20 chr10 44421191 44421240 -95895525 + Tigger5 DNA MER2_type 8 55 -2268 * 337 243 0 14 chr10 44421208 44421282 -95895483 + Tigger5 DNA MER2_type 2251 2323 0 304 241 0 0 chr10 44421354 44421412 -95895353 + Tigger5 DNA MER2_type 2266 2323 0 521 261 35 57 chr10 44421446 44421473 -95895292 - L1MC4a LINE L1 -1896 5912 5886 2064 194 69 16 chr10 44421473 44421907 -95894858 - MSTB2 LTR MaLR 0 457 1 521 261 35 57 chr10 44421907 44422109 -95894656 - L1MC4a LINE L1 -1922 5886 5688 180 232 110 49 chr10 44422269 44422351 -95894414 + MIR SINE MIR 69 155 -107 * 199 270 225 0 chr10 44422343 44422432 -95894333 - MIR SINE MIR 0 262 154 564 186 9 9 chr10 44428821 44429044 -95887721 + (TGGA)n Simple_repeat Simple_repeat 1 223 0 455 244 0 6 chr10 44429068 44429232 -95887533 + (TGGA)n Simple_repeat Simple_repeat 3 165 0 431 171 8 68 chr10 44430036 44430153 -95886612 - MER53 DNA DNA -7 182 73 282 197 28 0 chr10 44430181 44430252 -95886513 + MER53 DNA DNA 117 189 0 3326 180 51 40 chr10 44430778 44431186 -95885579 + MER21B LTR ERV1 1 403 -460 2303 94 0 0 chr10 44431186 44431485 -95885280 - AluSq SINE Alu -14 299 1 3326 180 51 40 chr10 44431485 44431883 -95884882 + MER21B LTR ERV1 403 851 -12 250 252 76 30 chr10 44432979 44433110 -95883655 + MER113 DNA MER1_type? 7 143 -378 26 74 0 0 chr10 44433150 44433204 -95883561 + AT_rich Low_complexity Low_complexity 1 54 0 2415 40 0 3 chr10 44433766 44434120 -95882645 - AluY SINE Alu 0 311 1 242 301 225 5 chr10 44434179 44434392 -95882373 + L2 LINE L2 3048 3307 -6 360 111 0 0 chr10 44434973 44435027 -95881738 + (TGGG)n Simple_repeat Simple_repeat 2 55 0 201 404 13 33 chr10 44435599 44435750 -95881015 - MIR SINE MIR -4 258 111 212 174 22 0 chr10 44436365 44436411 -95880354 + (CCCCG)n Simple_repeat Simple_repeat 2 48 0 237 65 0 0 chr10 44436498 44436529 -95880236 + (CCCG)n Simple_repeat Simple_repeat 4 34 0 189 0 0 0 chr10 44438292 44438313 -95878452 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 183 80 0 0 chr10 44439649 44439674 -95877091 + (A)n Simple_repeat Simple_repeat 1 25 0 218 369 27 9 chr10 44452204 44452315 -95864450 + MIR SINE MIR 34 146 -62 200 298 159 46 chr10 44453009 44453160 -95863605 - MER91A DNA MER1_type -13 183 16 2034 128 20 43 chr10 44453629 44453974 -95862791 - MER1B DNA MER1_type 0 337 1 1922 309 172 27 chr10 44454713 44454988 -95861777 + L2 LINE L2 1119 1353 -1960 1881 97 23 0 chr10 44454988 44455246 -95861519 + L1PA13 LINE L1 5900 6163 0 1922 309 172 27 chr10 44455246 44455963 -95860802 + L2 LINE L2 1353 1964 -1349 2439 83 0 0 chr10 44455963 44456275 -95860490 - AluSx SINE Alu 0 312 1 1922 309 172 27 chr10 44456275 44457186 -95859579 + L2 LINE L2 1964 3307 -6 253 292 31 21 chr10 44457775 44457871 -95858894 - MIR SINE MIR -151 111 15 228 35 0 0 chr10 44459149 44459178 -95857587 + (ATG)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr10 44461898 44461922 -95854843 + (A)n Simple_repeat Simple_repeat 1 24 0 285 295 53 0 chr10 44463911 44464006 -95852759 + MER5B DNA MER1_type 79 178 0 373 262 135 0 chr10 44464014 44464140 -95852625 - MER5A DNA MER1_type 0 189 47 183 167 0 0 chr10 44465130 44465172 -95851593 + GA-rich Low_complexity Low_complexity 1 42 0 186 255 0 0 chr10 44465173 44465224 -95851541 + (CA)n Simple_repeat Simple_repeat 2 52 0 258 32 0 0 chr10 44465557 44465588 -95851177 + (CA)n Simple_repeat Simple_repeat 1 31 0 252 143 0 0 chr10 44465732 44465774 -95850991 + (TG)n Simple_repeat Simple_repeat 1 42 0 482 210 0 20 chr10 44466432 44466532 -95850233 + LTR33 LTR ERVL 424 521 0 339 306 121 7 chr10 44466865 44467071 -95849694 + MIR SINE MIR 8 252 -10 271 347 41 12 chr10 44468110 44468280 -95848485 + L2 LINE L2 2683 2857 -457 276 337 12 18 chr10 44469207 44469376 -95847389 + GA-rich Low_complexity Low_complexity 2 169 0 1987 134 3 10 chr10 44469805 44470119 -95846646 + AluSx SINE Alu 1 312 0 853 68 54 7 chr10 44470156 44470304 -95846461 + GA-rich Low_complexity Low_complexity 2 156 0 310 304 3 0 chr10 44470350 44470450 -95846315 + MIR SINE MIR 86 185 -56 327 329 35 14 chr10 44470767 44470820 -95845945 - MIR SINE MIR -54 208 158 2346 172 31 13 chr10 44470820 44471209 -95845556 + MSTD LTR MaLR 1 396 0 327 329 35 14 chr10 44471209 44471298 -95845467 - MIR SINE MIR -104 158 63 283 299 48 80 chr10 44471547 44471734 -95845031 - MLT1K LTR MaLR -396 192 12 195 333 83 21 chr10 44471842 44471938 -95844827 + L2 LINE L2 3123 3224 -48 273 364 13 26 chr10 44471980 44472131 -95844634 - L2 LINE L2 -570 2744 2596 243 389 38 0 chr10 44475118 44475249 -95841516 - MIR SINE MIR -19 243 108 970 280 101 37 chr10 44475333 44475565 -95841200 + MER74B LTR ERVL 56 272 -350 2016 177 40 6 chr10 44475565 44475916 -95840849 + MLT1A1 LTR MaLR 3 365 0 970 280 101 37 chr10 44475916 44476148 -95840617 + MER74B LTR ERVL 272 550 -72 267 294 83 9 chr10 44477764 44477873 -95838892 - L3 LINE CR1 -758 819 703 1161 88 0 0 chr10 44477885 44478032 -95838733 + AluSg/x SINE Alu 166 312 0 723 275 64 28 chr10 44479219 44479546 -95837219 - MLT1G LTR MaLR 0 590 252 1749 212 35 0 chr10 44479571 44479931 -95836834 + MLT2D LTR ERVL 1 376 -38 396 0 0 0 chr10 44479931 44479975 -95836790 + (CA)n Simple_repeat Simple_repeat 2 45 0 1749 212 35 0 chr10 44479975 44479991 -95836774 + MLT2D LTR ERVL 376 390 -24 332 173 40 13 chr10 44480095 44480170 -95836595 - MLT1G LTR MaLR -500 90 14 529 256 191 10 chr10 44480745 44481044 -95835721 - MLT1G3 LTR MaLR -197 333 1 328 315 34 34 chr10 44481054 44481203 -95835562 - MIR SINE MIR -112 150 2 652 138 297 0 chr10 44481627 44481765 -95835000 + MER5A DNA MER1_type 4 182 -7 263 252 65 47 chr10 44481794 44481901 -95834864 - L2 LINE L2 -553 2761 2653 223 227 76 0 chr10 44482296 44482362 -95834403 + MIR SINE MIR 127 197 -65 267 221 176 0 chr10 44482431 44482499 -95834266 - L2 LINE L2 0 3272 3193 212 381 57 21 chr10 44482556 44482750 -95834015 + MIR SINE MIR 15 215 -47 1961 156 92 6 chr10 44484611 44484969 -95831796 - MLT1B LTR MaLR -1 389 1 329 235 227 8 chr10 44486086 44486218 -95830547 - MIR SINE MIR 0 262 102 424 234 11 0 chr10 44487677 44487771 -95828994 - Tigger7 DNA MER2_type 0 2491 2397 264 274 12 0 chr10 44487772 44487856 -95828909 - MLT1A1 LTR MaLR -202 163 79 * 722 268 49 5 chr10 44487843 44488048 -95828717 + MLT1A1 LTR MaLR 152 365 0 210 310 115 0 chr10 44489137 44489250 -95827515 + MIR SINE MIR 133 258 -4 263 303 64 18 chr10 44489746 44489855 -95826910 + MIR SINE MIR 34 147 -61 1332 170 22 0 chr10 44490024 44490254 -95826511 + MER46A DNA MER2_type 1 235 -1 243 114 0 0 chr10 44491052 44491096 -95825669 + (TG)n Simple_repeat Simple_repeat 1 44 0 2306 108 16 0 chr10 44491417 44491722 -95825043 - AluSq SINE Alu -2 311 2 332 260 150 59 chr10 44493684 44494057 -95822708 - MLT1J1 LTR MaLR -14 432 26 189 261 87 29 chr10 44494859 44494928 -95821837 + MIR SINE MIR 81 153 -109 314 316 72 40 chr10 44495127 44495279 -95821486 + L2 LINE L2 3116 3272 0 182 336 63 56 chr10 44495500 44495643 -95821122 + L3 LINE CR1 1419 1562 -15 281 258 43 0 chr10 44496419 44496512 -95820253 + MLT1J2 LTR MaLR 30 126 -324 437 284 0 43 chr10 44497407 44497523 -95819242 + MER5B DNA MER1_type 50 160 -18 1399 258 101 33 chr10 44497649 44498019 -95818746 - L1MC4a LINE L1 -1892 5916 5492 1808 191 40 32 chr10 44498019 44498390 -95818375 - MLT1A2 LTR MaLR 0 374 1 1399 258 101 33 chr10 44498390 44498596 -95818169 - L1MC4a LINE L1 -2316 5492 5301 192 361 36 0 chr10 44499004 44499087 -95817678 + L2 LINE L2 3184 3269 -3 205 329 61 0 chr10 44499967 44500049 -95816716 - L2 LINE L2 -3 3310 3224 787 212 24 18 chr10 44500063 44500233 -95816532 + MER5B DNA MER1_type 1 171 -7 328 333 73 20 chr10 44500520 44500724 -95816041 - L2 LINE L2 -861 2453 2239 1949 146 37 37 chr10 44500901 44501279 -95815486 - MSTA LTR MaLR 0 428 51 1501 226 83 21 chr10 44501279 44501421 -95815344 - L1MD2 LINE L1 -59 6560 6428 297 0 0 0 chr10 44501421 44501454 -95815311 + (TG)n Simple_repeat Simple_repeat 2 34 0 1501 226 83 21 chr10 44501454 44501790 -95814975 - L1MD2 LINE L1 -191 6428 6052 1167 218 59 78 chr10 44501790 44502212 -95814553 + MLT2B1 LTR ERVL 1 414 0 2629 245 39 21 chr10 44502216 44503772 -95812993 - L1MD2 LINE L1 -567 6052 4471 937 252 17 8 chr10 44503764 44504002 -95812763 - L1MD2 LINE L1 -6146 263 24 * 480 300 42 11 chr10 44504056 44504246 -95812519 + MIR SINE MIR 32 227 -35 191 384 40 0 chr10 44504285 44504384 -95812381 - L2 LINE L2 -633 2681 2579 1450 142 35 11 chr10 44505280 44505540 -95811225 - MSTB LTR MaLR -36 390 125 2458 144 21 30 chr10 44506679 44506748 -95810017 + MSTB LTR MaLR 1 69 -357 2400 123 19 136 chr10 44506748 44506803 -95809962 - LTR46 LTR ERV1 0 460 400 252 0 0 0 chr10 44506803 44506831 -95809934 + (GA)n Simple_repeat Simple_repeat 1 28 0 2400 123 19 136 chr10 44506831 44507296 -95809469 - LTR46 LTR ERV1 -60 400 1 2458 144 21 30 chr10 44507296 44507656 -95809109 + MSTB LTR MaLR 69 426 0 554 233 69 0 chr10 44507768 44507927 -95808838 + MLT1K LTR MaLR 411 580 -8 500 274 113 34 chr10 44509219 44509598 -95807167 - LTR16A LTR ERVL -26 424 16 251 237 158 84 chr10 44509739 44509929 -95806836 - MIR SINE MIR -2 260 57 202 283 139 46 chr10 44511067 44511240 -95805525 + L2 LINE L2 2897 3085 -187 210 308 46 0 chr10 44512076 44512141 -95804624 + MIR SINE MIR 81 148 -60 2390 178 64 2 chr10 44512625 44513080 -95803685 - MER31A LTR ERV1 -2 483 1 7119 62 3 0 chr10 44513540 44514640 -95802125 - L1PA7 LINE L1 -2 6152 5051 4544 107 3 0 chr10 44514641 44515323 -95801442 + L1PA7 LINE L1 4362 5045 -1101 1044 293 42 9 chr10 44515637 44515968 -95800797 - L2 LINE L2 -14 3299 2958 371 316 63 21 chr10 44517006 44517243 -95799522 + LTR16C LTR ERVL 237 483 -8 247 257 9 46 chr10 44517453 44517562 -95799203 + L1 LINE L1 3713 3817 -2329 2251 105 0 10 chr10 44517707 44518003 -95798762 + AluSc SINE Alu 1 293 -16 5489 39 2 0 chr10 44518299 44518940 -95797825 + L1PA4 LINE L1 5511 6152 -3 351 227 0 0 chr10 44519431 44519528 -95797237 + (TA)n Simple_repeat Simple_repeat 1 97 0 5999 111 55 16 chr10 44519555 44520584 -95796181 - Tigger3b DNA MER2_type -3 1228 160 266 254 42 0 chr10 44520585 44520656 -95796109 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 703 260 64 0 chr10 44521314 44521487 -95795278 + MER5A DNA MER1_type 6 189 0 1964 132 0 43 chr10 44521637 44521962 -95794803 + MER1B DNA MER1_type 28 338 -1 233 344 33 20 chr10 44525785 44525936 -95790829 - L1MC/D LINE L1 -1925 5883 5731 383 246 126 22 chr10 44525954 44526137 -95790628 - L1ME3A LINE L1 -9 6161 5960 394 281 161 15 chr10 44526149 44526348 -95790417 - L1MC/D LINE L1 -2015 4131 3904 334 282 75 48 chr10 44526568 44526756 -95790009 - L2 LINE L2 -193 3120 2928 452 183 54 0 chr10 44526845 44526938 -95789827 - MLT2D LTR ERVL -311 103 6 446 255 51 19 chr10 44527329 44527486 -95789279 + MER103 DNA DNA 2 163 -3 2472 134 48 24 chr10 44527519 44527937 -95788828 - MSTA LTR MaLR 0 428 1 2112 128 0 0 chr10 44528673 44528971 -95787794 + AluSx SINE Alu 5 302 -10 976 104 0 0 chr10 44529008 44529142 -95787623 - L1PA10 LINE L1 -23 6145 6012 1645 103 45 4 chr10 44529149 44529392 -95787373 + AluSx SINE Alu 56 308 -4 24 32 0 0 chr10 44529652 44529683 -95787082 + AT_rich Low_complexity Low_complexity 1 31 0 2195 70 0 40 chr10 44529714 44530013 -95786752 + AluSg SINE Alu 2 288 -22 1380 79 0 123 chr10 44530116 44530371 -95786394 + AluSg/x SINE Alu 92 318 0 2295 90 0 0 chr10 44530698 44530987 -95785778 + AluY SINE Alu 1 289 -22 200 188 0 42 chr10 44532451 44532499 -95784266 - L2 LINE L2 -4 3309 3264 443 332 71 5 chr10 44532570 44532766 -95783999 - MIR SINE MIR -31 231 23 336 221 118 29 chr10 44532846 44532982 -95783783 + MIR SINE MIR 71 218 -44 6021 62 19 42 chr10 44533148 44534003 -95782762 + SVA Other Other 552 1386 0 2232 126 0 0 chr10 44534022 44534324 -95782441 + AluSq SINE Alu 2 303 -10 1852 94 49 11 chr10 44534326 44534591 -95782174 + AluSg SINE Alu 1 275 -35 7518 30 2 4 chr10 44534691 44536332 -95780433 + L1PA4 LINE L1 4515 6153 -2 1128 167 59 14 chr10 44536504 44536524 -95780241 - L1M4 LINE L1 -1731 4415 4397 4769 136 28 7 chr10 44536524 44537355 -95779410 - L1MA5A LINE L1 0 6297 5450 1128 167 59 14 chr10 44537355 44537630 -95779135 - L1M4 LINE L1 -1749 4397 4106 237 135 0 0 chr10 44538136 44538173 -95778592 + L1M1 LINE L1 5696 5732 -568 260 213 0 0 chr10 44538547 44538608 -95778157 + A-rich Low_complexity Low_complexity 1 61 0 22 35 0 0 chr10 44539066 44539095 -95777670 + AT_rich Low_complexity Low_complexity 1 29 0 808 279 103 39 chr10 44539496 44540135 -95776630 - L1M4 LINE L1 -842 5304 4625 2193 268 122 30 chr10 44540194 44541803 -95774962 - L1M4 LINE L1 -1628 4518 2761 2792 237 29 11 chr10 44541943 44542892 -95773873 - L1MC/D LINE L1 -746 5400 4472 201 273 0 0 chr10 44543094 44543149 -95773616 + (TA)n Simple_repeat Simple_repeat 2 56 0 323 233 249 16 chr10 44543149 44543342 -95773423 - L1MC4a LINE L1 -1853 5955 5718 538 334 108 30 chr10 44543416 44544009 -95772756 - L1MC/D LINE L1 -3333 2813 2175 184 358 46 18 chr10 44545312 44545421 -95771344 + L2 LINE L2 692 803 -2511 245 288 0 0 chr10 44545578 44545644 -95771121 + CT-rich Low_complexity Low_complexity 2 67 0 472 280 81 27 chr10 44546133 44546319 -95770446 - L2 LINE L2 0 3313 3118 223 405 0 0 chr10 44546699 44546810 -95769955 + MIR3 SINE MIR 87 197 -11 271 351 91 26 chr10 44547717 44547871 -95768894 + L2 LINE L2 3101 3264 -8 203 268 110 94 chr10 44549073 44549200 -95767565 + MIR SINE MIR 80 208 -54 310 278 0 0 chr10 44549754 44549826 -95766939 - L2 LINE L2 -5 3308 3237 1049 184 66 0 chr10 44550511 44550723 -95766042 - MIR SINE MIR -5 257 32 425 268 161 0 chr10 44550934 44551122 -95765643 + MIR SINE MIR 18 232 -30 1457 247 40 40 chr10 44551570 44552019 -95764746 + L1M3b LINE L1 22 470 -5811 2631 185 4 49 chr10 44552020 44552551 -95764214 - MER52A LTR ERV1 0 1755 1249 306 73 0 0 chr10 44552566 44552607 -95764158 + (GGGAGA)n Simple_repeat Simple_repeat 1 41 0 321 58 19 39 chr10 44552616 44552668 -95764097 - MER52A LTR ERV1 -498 1257 1207 * 2704 201 84 58 chr10 44552642 44553870 -95762895 - MER52A LTR ERV1 -304 1376 1 3113 240 42 80 chr10 44553870 44556301 -95760464 + L1M3b LINE L1 468 2988 -3362 677 187 0 41 chr10 44556301 44556424 -95760341 + FLAM_C SINE Alu 1 118 -15 213 39 0 0 chr10 44556428 44556454 -95760311 + (GA)n Simple_repeat Simple_repeat 2 27 0 3113 240 42 80 chr10 44556454 44556882 -95759883 + L1M3b LINE L1 2432 2874 -3476 207 0 0 0 chr10 44556982 44557005 -95759760 + (TA)n Simple_repeat Simple_repeat 2 24 0 2317 108 0 10 chr10 44557005 44557319 -95759446 - AluSx SINE Alu -1 311 1 620 297 48 7 chr10 44557320 44557589 -95759176 - L1ME3A LINE L1 -297 5873 5594 2087 107 38 3 chr10 44557663 44557954 -95758811 - AluSg SINE Alu -9 301 1 504 227 47 17 chr10 44557955 44558127 -95758638 + MER104 DNA Tc2 2 178 -2 353 289 90 60 chr10 44559834 44560000 -95756765 - MIR SINE MIR -71 191 21 641 66 11 0 chr10 44560138 44560229 -95756536 + (GGAA)n Simple_repeat Simple_repeat 3 94 0 360 0 0 0 chr10 44561255 44561295 -95755470 + (CA)n Simple_repeat Simple_repeat 2 41 0 224 219 20 75 chr10 44562640 44562786 -95753979 + (CAGGG)n Simple_repeat Simple_repeat 3 140 0 * 259 290 0 48 chr10 44562743 44562929 -95753836 + G-rich Low_complexity Low_complexity 2 178 0 230 365 7 7 chr10 44562865 44563013 -95753752 + (GGGTG)n Simple_repeat Simple_repeat 4 151 0 * 430 290 136 53 chr10 44563470 44563977 -95752788 - L1ME3A LINE L1 -847 5299 4751 402 237 0 25 chr10 44564027 44564145 -95752620 - L1ME3A LINE L1 -1465 4681 4567 14687 102 1 0 chr10 44564543 44567441 -95749324 - L1PA8 LINE L1 0 6172 3276 26 0 0 0 chr10 44567448 44567474 -95749291 + AT_rich Low_complexity Low_complexity 1 26 0 35 54 0 0 chr10 44567644 44567700 -95749065 + AT_rich Low_complexity Low_complexity 1 56 0 325 306 108 10 chr10 44567794 44568193 -95748572 - L1ME3A LINE L1 -2130 4016 3579 31 26 0 0 chr10 44568422 44568460 -95748305 + AT_rich Low_complexity Low_complexity 1 38 0 1751 180 0 23 chr10 44568497 44568802 -95747963 + AluJo SINE Alu 3 300 -12 452 303 158 21 chr10 44568817 44569240 -95747525 - L1ME3A LINE L1 -3143 3003 2523 248 301 107 14 chr10 44569251 44569467 -95747298 - L1ME3A LINE L1 -3633 2513 2278 249 343 47 12 chr10 44569478 44569650 -95747115 - LTR33A LTR ERVL -13 510 333 332 274 159 18 chr10 44569978 44570220 -95746545 - L1ME LINE L1 -370 5794 5521 465 192 0 0 chr10 44570489 44570567 -95746198 + AluJ/FLAM SINE Alu 1 78 -234 * 600 215 0 42 chr10 44570566 44570710 -95746055 + AluJo/FRAM SINE Alu 171 308 -4 244 307 45 17 chr10 44570712 44570888 -95745877 + L1M4 LINE L1 2749 2929 -3217 605 312 50 25 chr10 44571401 44572115 -95744650 + L1MEc LINE L1 1030 1761 -4635 25 51 0 0 chr10 44572143 44572182 -95744583 + AT_rich Low_complexity Low_complexity 1 39 0 323 307 31 87 chr10 44572309 44572553 -95744212 + L1MEc LINE L1 1941 2229 -4029 403 241 142 0 chr10 44572572 44572784 -95743981 + L1MEc LINE L1 2214 2455 -3760 21 57 0 0 chr10 44572798 44572833 -95743932 + AT_rich Low_complexity Low_complexity 1 35 0 1795 242 42 26 chr10 44572953 44573652 -95743113 - L1M4 LINE L1 -3354 3603 2921 225 191 0 0 chr10 44573654 44573696 -95743069 + U2 snRNA snRNA 1 42 -146 386 286 27 65 chr10 44573778 44574163 -95742602 - L1M4 LINE L1 -4160 2824 2473 1714 244 28 76 chr10 44574295 44575539 -95741226 - L1M4 LINE L1 -4553 2406 1207 2290 316 29 27 chr10 44576007 44576907 -95739858 - L1M4 LINE L1 -5861 998 97 1330 147 0 0 chr10 44576907 44577121 -95739644 - AluSq SINE Alu 0 309 96 244 186 169 0 chr10 44577128 44577187 -95739578 - L1M4 LINE L1 -6761 98 30 466 134 12 0 chr10 44577210 44577292 -95739473 - MER57A LTR ERV1 -320 83 1 1148 206 0 26 chr10 44577293 44577560 -95739205 - MER57A-int LTR ERV1 -1 7536 7277 619 175 40 8 chr10 44577560 44577686 -95739079 - LTR54B LTR ERV1 -366 132 3 617 118 0 0 chr10 44577689 44577774 -95738991 - MER57A-int LTR ERV1 -394 7143 7059 610 355 8 16 chr10 44580271 44580513 -95736252 - MIR SINE MIR -21 241 2 185 304 18 0 chr10 44581148 44581204 -95735561 + L2 LINE L2 3256 3312 -1 2136 98 0 3 chr10 44581379 44581665 -95735100 + AluY SINE Alu 23 307 -4 4447 229 57 29 chr10 44581744 44583504 -95733261 - L1MD2 LINE L1 -2 6426 4618 2215 167 54 2 chr10 44583739 44584146 -95732619 - MSTA LTR MaLR 0 428 1 317 245 12 25 chr10 44586173 44586336 -95730429 + (TATG)n Simple_repeat Simple_repeat 2 162 0 183 250 0 0 chr10 44586343 44586395 -95730370 + (CATATA)n Simple_repeat Simple_repeat 4 55 0 909 195 123 0 chr10 44588005 44588282 -95728483 - MER33 DNA MER1_type -1 323 13 260 367 95 14 chr10 44588425 44588635 -95728130 - MIR SINE MIR 0 262 36 246 250 70 10 chr10 44589418 44589518 -95727247 + MER113 DNA MER1_type? 1 106 -415 2443 253 35 63 chr10 44589603 44590793 -95725972 - L1MD2 LINE L1 -4146 2250 1094 376 75 0 45 chr10 44590811 44590878 -95725887 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 844 291 69 78 chr10 44590878 44591322 -95725443 - L1MD2 LINE L1 -5531 865 430 1687 184 14 3 chr10 44591322 44591616 -95725149 + AluJb SINE Alu 1 297 -15 844 291 69 78 chr10 44591616 44591951 -95724814 - L1MD2 LINE L1 -5966 430 93 23 78 0 0 chr10 44592104 44592155 -95724610 + AT_rich Low_complexity Low_complexity 1 51 0 1595 184 7 45 chr10 44592344 44592654 -95724111 - AluJb SINE Alu -14 298 1 22 0 0 0 chr10 44593380 44593402 -95723363 + AT_rich Low_complexity Low_complexity 1 22 0 1465 246 117 58 chr10 44593491 44594081 -95722684 - MLT1E2 LTR MaLR -1 625 1 2218 117 0 10 chr10 44594166 44594474 -95722291 - AluSx SINE Alu -7 305 1 244 314 105 0 chr10 44594742 44594847 -95721918 - MIR SINE MIR -59 203 88 234 0 0 0 chr10 44595356 44595382 -95721383 + (T)n Simple_repeat Simple_repeat 1 26 0 26 0 0 0 chr10 44595937 44595963 -95720802 + AT_rich Low_complexity Low_complexity 1 26 0 1563 262 137 17 chr10 44596342 44596869 -95719896 + MLT1G LTR MaLR 1 590 0 2322 202 54 32 chr10 44597390 44597462 -95719303 - L1MB8 LINE L1 -9 6169 6098 9454 244 75 54 chr10 44597462 44600002 -95716763 - L1MC4 LINE L1 -745 5899 3412 2367 65 17 0 chr10 44600002 44600294 -95716471 - AluY SINE Alu -9 302 6 9454 244 75 54 chr10 44600294 44603641 -95713124 - L1MC4 LINE L1 -3232 3412 483 322 298 67 113 chr10 44603697 44604130 -95712635 - L1MC4 LINE L1 -6114 428 16 30 0 0 0 chr10 44604557 44604587 -95712178 + AT_rich Low_complexity Low_complexity 1 30 0 15136 145 31 13 chr10 44605323 44607878 -95708887 + Tigger2 DNA MER2_type 83 2684 -34 961 288 108 19 chr10 44607957 44608671 -95708094 + L1M4 LINE L1 2635 3428 -2718 2313 113 0 0 chr10 44608671 44608981 -95707784 + AluY SINE Alu 1 310 -1 961 288 108 19 chr10 44608981 44609059 -95707706 + L1M4 LINE L1 3428 3498 -2648 903 192 110 39 chr10 44609139 44609467 -95707298 - L1ME LINE L1 -618 5548 5206 1677 160 6 39 chr10 44609467 44609779 -95706986 - AluJb SINE Alu 0 312 11 903 192 110 39 chr10 44609779 44609812 -95706953 - L1ME LINE L1 -960 5206 5177 1800 86 114 0 chr10 44609844 44610099 -95706666 - AluSp SINE Alu -25 288 5 1049 235 132 31 chr10 44610118 44610543 -95706222 + L1M4 LINE L1 4699 5166 -980 21 36 0 0 chr10 44611424 44611452 -95705313 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 44611626 44611657 -95705108 + AT_rich Low_complexity Low_complexity 1 31 0 669 187 18 58 chr10 44612644 44612815 -95703950 - MIR SINE MIR -2 260 97 739 236 79 0 chr10 44613007 44613172 -95703593 + MER45A DNA AcHobo 1 178 0 190 275 113 0 chr10 44613834 44613914 -95702851 + L2 LINE L2 3179 3267 -46 1704 182 6 50 chr10 44614160 44614523 -95702242 + MER7A DNA MER2_type 2 346 0 462 215 209 0 chr10 44614863 44615026 -95701739 + LTR50 LTR ERVL 57 253 -542 241 258 0 16 chr10 44615078 44615140 -95701625 + L1MC4a LINE L1 2647 2707 -3439 201 147 0 0 chr10 44615142 44615176 -95701589 + (TA)n Simple_repeat Simple_repeat 2 35 0 306 285 96 35 chr10 44615321 44615494 -95701271 + L1MC4a LINE L1 2874 3035 -3111 2161 98 3 3 chr10 44615494 44615815 -95700950 - AluSp SINE Alu 0 321 1 306 285 96 35 chr10 44615815 44616015 -95700750 + L1MC4a LINE L1 3035 3271 -2875 361 322 83 0 chr10 44616283 44616404 -95700361 - L2 LINE L2 -1 3312 3182 834 196 35 6 chr10 44616596 44616769 -95699996 + MER3 DNA MER1_type 1 131 -78 1297 307 122 19 chr10 44617139 44618128 -95698637 - L2 LINE L2 -9 3304 2201 351 304 61 37 chr10 44618132 44618441 -95698324 + L1MC4a LINE L1 3638 3957 -2189 399 303 134 8 chr10 44618468 44618729 -95698036 + L1MC4a LINE L1 5674 5967 -1841 2237 115 0 0 chr10 44618746 44619041 -95697724 - AluSx SINE Alu -17 295 1 309 28 0 0 chr10 44619146 44619182 -95697583 + L1PA7 LINE L1 6069 6104 -50 4780 201 33 15 chr10 44619585 44621014 -95695751 - L1MCa LINE L1 -2591 3835 2434 1947 130 7 0 chr10 44621014 44621290 -95695475 + AluSx SINE Alu 1 278 -34 351 0 0 0 chr10 44621292 44621331 -95695434 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4780 201 33 15 chr10 44621331 44622062 -95694703 - L1MCa LINE L1 -3992 2434 1541 292 361 62 79 chr10 44622432 44622787 -95693978 - L2 LINE L2 0 3272 2924 199 359 23 30 chr10 44622830 44622961 -95693804 - L2 LINE L2 -557 2757 2628 185 354 0 13 chr10 44624091 44624170 -95692595 - MIR SINE MIR -136 126 49 7636 226 82 33 chr10 44624240 44624495 -95692270 - L1MB4 LINE L1 -1 6677 6436 1819 165 80 34 chr10 44624495 44624908 -95691857 + MSTB1 LTR MaLR 1 432 0 7636 226 82 33 chr10 44624908 44626622 -95690143 - L1MB4 LINE L1 -242 6436 4807 185 0 0 39 chr10 44626622 44626648 -95690117 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2133 107 0 0 chr10 44626648 44626918 -95689847 - AluSx SINE Alu -40 272 3 7636 226 82 33 chr10 44626918 44627365 -95689400 - L1MB4 LINE L1 -1871 4807 4383 2506 61 0 3 chr10 44627365 44627676 -95689089 - AluY SINE Alu -1 310 1 7636 226 82 33 chr10 44627676 44627906 -95688859 - L1MB4 LINE L1 -2295 4383 4166 2173 113 3 0 chr10 44627906 44628197 -95688568 - AluSx SINE Alu -20 292 1 7636 226 82 33 chr10 44628197 44629176 -95687589 - L1MB4 LINE L1 -2512 4166 3236 243 61 0 0 chr10 44629176 44629209 -95687556 + (CA)n Simple_repeat Simple_repeat 1 33 0 7636 226 82 33 chr10 44629209 44631546 -95685219 - L1MB4 LINE L1 -3442 3236 386 352 249 5 173 chr10 44631742 44631814 -95684951 - L1MB4 LINE L1 -6378 164 82 3448 122 23 0 chr10 44631814 44632381 -95684384 + L1MA5A LINE L1 5718 6297 0 352 249 5 173 chr10 44632381 44632425 -95684340 - L1MB4 LINE L1 -6460 82 91 2237 114 7 0 chr10 44632425 44632731 -95684034 - AluSp SINE Alu -5 308 1 352 249 5 173 chr10 44632731 44632810 -95683955 - L1MB4 LINE L1 -6450 92 1 22 0 0 0 chr10 44633425 44633447 -95683318 + AT_rich Low_complexity Low_complexity 1 22 0 4403 221 115 17 chr10 44634980 44636192 -95680573 + L1M4 LINE L1 9 1338 -5521 2831 219 33 98 chr10 44636186 44637557 -95679208 + L1M4 LINE L1 4337 5618 -1339 * 247 197 0 14 chr10 44637592 44637663 -95679102 + L1MB8 LINE L1 6108 6177 -1 22 35 0 0 chr10 44637925 44637954 -95678811 + AT_rich Low_complexity Low_complexity 1 29 0 956 280 53 56 chr10 44638021 44639672 -95677093 + L1ME3 LINE L1 1772 6818 -155 335 261 0 22 chr10 44639760 44639852 -95676913 + L1MC4 LINE L1 6614 6703 -1339 195 139 0 0 chr10 44639858 44639894 -95676871 + (TA)n Simple_repeat Simple_repeat 2 37 0 186 103 0 0 chr10 44640658 44640687 -95676078 + (TG)n Simple_repeat Simple_repeat 2 30 0 2312 41 24 10 chr10 44641016 44641307 -95675458 + AluY SINE Alu 1 295 -16 216 246 0 18 chr10 44641403 44641460 -95675305 + CT-rich Low_complexity Low_complexity 4 59 0 26737 138 11 60 chr10 44642223 44648717 -95668048 - L1PA8 LINE L1 -4 6168 4 258 247 0 0 chr10 44649171 44649248 -95667517 + CT-rich Low_complexity Low_complexity 2 78 0 557 226 18 12 chr10 44649895 44650059 -95666706 + L1M4 LINE L1 2721 2885 -3261 3554 195 11 2 chr10 44650072 44650871 -95665894 + L1MA7 LINE L1 3250 4055 -2091 * 4826 166 14 24 chr10 44650868 44652215 -95664550 + L1MA7 LINE L1 4946 6281 -10 399 365 6 36 chr10 44654265 44654369 -95662396 - MIR SINE MIR -98 164 65 1714 183 72 14 chr10 44654369 44654714 -95662051 + MLT1A1 LTR MaLR 1 365 0 399 365 6 36 chr10 44654714 44654776 -95661989 - MIR SINE MIR -197 65 3 189 0 0 0 chr10 44655833 44655854 -95660911 + (TTAAA)n Simple_repeat Simple_repeat 1 21 0 377 235 52 0 chr10 44656361 44656476 -95660289 + MLT1J2 LTR MaLR 328 448 -2 240 304 27 34 chr10 44656481 44656629 -95660136 + L1M4 LINE L1 3804 3950 -2196 307 39 20 39 chr10 44657341 44657392 -95659373 - L1PB4 LINE L1 -2 6154 6105 364 297 47 3 chr10 44658324 44658459 -95658306 - MIR3 SINE MIR -3 205 63 276 329 37 12 chr10 44659857 44660018 -95656747 + L3 LINE CR1 649 813 -764 480 287 84 42 chr10 44660530 44660597 -95656168 + L3 LINE CR1 1317 1380 -197 216 0 0 0 chr10 44660597 44660621 -95656144 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 480 287 84 42 chr10 44660621 44660754 -95656011 + L3 LINE CR1 1380 1531 -46 1909 181 37 32 chr10 44660754 44661185 -95655580 - Tigger2a DNA MER2_type 0 434 2 480 287 84 42 chr10 44661185 44661220 -95655545 + L3 LINE CR1 1531 1563 -14 200 329 14 14 chr10 44662070 44662143 -95654622 + MER5B DNA MER1_type 3 75 -103 333 322 44 49 chr10 44662736 44662919 -95653846 + MIR3 SINE MIR 27 208 0 226 254 111 16 chr10 44665318 44665381 -95651384 - MIR SINE MIR -157 105 37 187 250 196 11 chr10 44665650 44665742 -95651023 - MIR SINE MIR -70 192 84 708 236 14 0 chr10 44666155 44666303 -95650462 + MER5A DNA MER1_type 40 189 0 255 283 58 52 chr10 44667351 44667524 -95649241 - L1ME3 LINE L1 -239 5923 5750 343 276 26 13 chr10 44667628 44667780 -95648985 - L1ME3 LINE L1 -572 5594 5441 22 0 0 0 chr10 44668028 44668050 -95648715 + AT_rich Low_complexity Low_complexity 1 22 0 276 279 196 6 chr10 44668599 44668778 -95647987 - L1M4 LINE L1 -5032 1823 1611 710 243 81 64 chr10 44668827 44669463 -95647302 - L1M4 LINE L1 -5183 1676 1029 263 254 54 88 chr10 44669755 44669856 -95646909 - L1M4 LINE L1 -6569 290 198 2206 129 3 0 chr10 44669856 44670166 -95646599 - AluSx SINE Alu -1 311 1 263 254 54 88 chr10 44670166 44670269 -95646496 - L1M4 LINE L1 -6661 198 93 355 321 54 38 chr10 44670351 44670591 -95646174 - L1ME3 LINE L1 -983 5163 4920 3325 18 0 0 chr10 44670660 44671057 -95645708 + L1P LINE L1 4013 4409 -1737 354 301 172 5 chr10 44671683 44671886 -95644879 - MIR SINE MIR -13 249 13 343 254 112 66 chr10 44672076 44672232 -95644533 + MIR SINE MIR 25 184 -63 2172 90 20 13 chr10 44672335 44672635 -95644130 + AluSx SINE Alu 1 302 -10 414 311 16 8 chr10 44674017 44674139 -95642626 + MIR SINE MIR 20 142 -66 229 323 30 20 chr10 44674314 44674413 -95642352 + MIR3 SINE MIR 109 208 0 251 269 214 21 chr10 44674550 44674695 -95642070 - MIR SINE MIR -52 210 38 996 220 9 5 chr10 44674706 44674924 -95641841 + MER20 DNA MER1_type 1 219 0 1953 129 3 30 chr10 44675707 44676010 -95640755 + AluSc SINE Alu 2 296 -13 4090 188 40 69 chr10 44676014 44677413 -95639352 + L1ME4a LINE L1 1276 2633 -3907 361 148 69 50 chr10 44677442 44677543 -95639222 - MER57A LTR ERV1 0 403 301 557 270 23 0 chr10 44677543 44677717 -95639048 + L1ME4a LINE L1 4392 4569 -1971 302 331 66 18 chr10 44679355 44679521 -95637244 + MIR3 SINE MIR 18 191 -17 296 327 74 0 chr10 44680009 44680171 -95636594 + L1ME4a LINE L1 5956 6129 -386 277 217 54 93 chr10 44680203 44680332 -95636433 + L1ME4a LINE L1 6203 6326 -189 1427 280 110 11 chr10 44680443 44680990 -95635775 + L1ME3A LINE L1 5565 6165 -5 433 308 49 49 chr10 44681273 44681497 -95635268 + L2 LINE L2 2922 3145 -168 279 263 0 0 chr10 44681507 44681583 -95635182 + L1MC4 LINE L1 6628 6703 -1339 248 262 0 0 chr10 44681607 44681668 -95635097 + (TA)n Simple_repeat Simple_repeat 2 62 0 333 342 42 0 chr10 44681740 44681860 -95634905 + L2 LINE L2 3185 3309 -4 549 0 0 0 chr10 44681961 44682022 -95634743 + (TC)n Simple_repeat Simple_repeat 1 61 0 406 49 33 0 chr10 44683078 44683139 -95633626 + (TC)n Simple_repeat Simple_repeat 1 63 0 514 243 65 70 chr10 44683320 44683534 -95633231 - MER102b DNA MER1_type -10 331 119 952 247 117 53 chr10 44683575 44684275 -95632490 + L2 LINE L2 2428 3187 -126 680 182 9 0 chr10 44684289 44684399 -95632366 + FLAM_A SINE Alu 19 129 -13 2112 280 31 38 chr10 44685519 44686205 -95630560 + L1MDa LINE L1 1 681 -5859 228 167 0 0 chr10 44686816 44686864 -95629901 + (CA)n Simple_repeat Simple_repeat 2 49 0 236 218 126 23 chr10 44687708 44687795 -95628970 + L2 LINE L2 3134 3229 -84 945 258 149 44 chr10 44687893 44688216 -95628549 + MLT1G LTR MaLR 3 291 -299 2020 146 53 12 chr10 44688216 44688538 -95628227 - MER1B DNA MER1_type 0 337 3 945 258 149 44 chr10 44688538 44688783 -95627982 + MLT1G LTR MaLR 291 589 -1 239 264 0 0 chr10 44688794 44688847 -95627918 - MIR SINE MIR -93 169 117 6946 105 44 15 chr10 44688976 44689344 -95627421 - L1MA2 LINE L1 -1 6303 5947 2103 128 3 0 chr10 44689344 44689642 -95627123 - AluSx SINE Alu -13 299 1 6946 105 44 15 chr10 44689642 44690593 -95626172 - L1MA2 LINE L1 -357 5947 4941 349 317 29 14 chr10 44690605 44690752 -95626013 - MIR SINE MIR -54 154 5 225 65 0 0 chr10 44690926 44690957 -95625808 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7056 239 46 14 chr10 44691282 44691512 -95625253 + L1M4 LINE L1 3245 3466 -2680 2590 68 0 0 chr10 44691512 44691822 -95624943 + AluY SINE Alu 1 310 -1 7056 239 46 14 chr10 44691822 44693587 -95623178 + L1M4 LINE L1 3466 5304 -842 2941 235 39 24 chr10 44693563 44694485 -95622280 + L1MB5 LINE L1 2812 3747 -2399 * 4135 204 21 29 chr10 44694457 44695366 -95621399 + L1MB5 LINE L1 5264 6165 -9 1892 185 42 58 chr10 44696261 44696791 -95619974 + L1MDa LINE L1 2113 2633 -3907 366 180 70 40 chr10 44696820 44696920 -95619845 - MER57A LTR ERV1 0 403 301 1082 236 53 19 chr10 44696930 44697252 -95619513 + L1M4 LINE L1 4008 4340 -1806 1924 174 59 31 chr10 44697341 44697732 -95619033 + MER93a LTR ERV1 1 402 0 336 148 0 0 chr10 44698690 44698751 -95618014 + (TG)n Simple_repeat Simple_repeat 2 62 0 417 273 47 0 chr10 44700953 44701081 -95615684 - L2 LINE L2 0 3313 3180 232 120 40 0 chr10 44703225 44703275 -95613490 + CT-rich Low_complexity Low_complexity 3 54 0 1024 59 5 38 chr10 44703276 44703462 -95613303 + (TC)n Simple_repeat Simple_repeat 1 180 0 1053 198 35 5 chr10 44705271 44705473 -95611292 - MER3 DNA MER1_type 0 209 2 40 37 0 0 chr10 44705672 44705726 -95611039 + AT_rich Low_complexity Low_complexity 1 54 0 787 293 128 65 chr10 44706052 44706913 -95609852 - L1M4 LINE L1 -774 5372 4458 1014 284 57 8 chr10 44707446 44707798 -95608967 + HERV16 LTR ERVL 805 1173 -3823 769 291 48 7 chr10 44707816 44708105 -95608660 - HERV16 LTR ERVL -4695 301 1 603 318 38 4 chr10 44708119 44708380 -95608385 - LTR16A LTR ERVL -15 435 166 1041 173 16 29 chr10 44708449 44708692 -95608073 + L1MD3 LINE L1 7756 7995 0 289 200 17 17 chr10 44709228 44709288 -95607477 - MIR SINE MIR 0 262 203 2296 106 0 3 chr10 44709747 44710050 -95606715 + AluSx SINE Alu 1 302 -10 1373 242 83 33 chr10 44710582 44711040 -95605725 - MLT1D LTR MaLR -18 487 7 21 0 0 0 chr10 44711669 44711690 -95605075 + AT_rich Low_complexity Low_complexity 1 21 0 200 286 32 0 chr10 44713668 44713731 -95603034 + (CA)n Simple_repeat Simple_repeat 2 66 0 315 267 8 92 chr10 44714324 44714402 -95602363 + L1MC1 LINE L1 5532 5598 -523 1799 117 39 55 chr10 44714402 44714709 -95602056 - AluSx SINE Alu -10 302 1 315 267 8 92 chr10 44714709 44714750 -95602015 + L1MC1 LINE L1 5598 5641 -480 2521 142 17 10 chr10 44715559 44715961 -95600804 + MER66B LTR ERV1 1 405 -81 1283 136 5 15 chr10 44716160 44716366 -95600399 - L1PA15 LINE L1 -1 6164 5961 1745 135 28 17 chr10 44716764 44717053 -95599712 + AluSx SINE Alu 1 292 -20 1441 103 0 15 chr10 44717080 44717311 -95599454 + AluSg/x SINE Alu 85 312 0 2435 49 14 0 chr10 44717341 44717629 -95599136 + AluY SINE Alu 1 292 -19 2718 123 34 63 chr10 44717630 44718237 -95598528 - MER4B LTR ERV1 0 779 3 2228 128 0 3 chr10 44718388 44718701 -95598064 + AluSx SINE Alu 1 312 0 3386 192 230 40 chr10 44719746 44720601 -95596164 - LTR28 LTR ERV1 0 1020 3 22 0 0 0 chr10 44720827 44720849 -95595916 + AT_rich Low_complexity Low_complexity 1 22 0 362 212 80 53 chr10 44720894 44721007 -95595758 - L1ME3A LINE L1 -90 6080 5965 434 246 133 0 chr10 44721935 44722130 -95594635 - L1MCa LINE L1 -3993 2433 2213 1767 213 42 2 chr10 44722269 44722677 -95594088 + L1MD2 LINE L1 5935 6358 -1 2581 188 60 18 chr10 44722682 44723252 -95593513 + L1MC1 LINE L1 5734 6327 -6 909 28 0 0 chr10 44723296 44723404 -95593361 + (TTTC)n Simple_repeat Simple_repeat 1 108 0 270 277 122 54 chr10 44725305 44725453 -95591312 + MIR3 SINE MIR 41 198 -10 3211 72 0 10 chr10 44725822 44726223 -95590542 - L1PA8 LINE L1 -2 6170 5774 4136 44 2 0 chr10 44726223 44726722 -95590043 + L1PA8 LINE L1 5291 5790 -382 2045 141 0 13 chr10 44726726 44727031 -95589734 - AluSx SINE Alu -11 301 1 998 225 24 0 chr10 44727190 44727403 -95589362 - L1PA16 LINE L1 -81 6085 5868 422 326 64 13 chr10 44727418 44727651 -95589114 - L1ME3A LINE L1 -303 5818 5574 219 298 0 0 chr10 44727721 44727768 -95588997 - L2 LINE L2 -16 3297 3251 * 534 250 219 0 chr10 44727732 44727924 -95588841 - MIR SINE MIR -21 241 8 30 0 0 0 chr10 44728023 44728053 -95588712 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr10 44728478 44728504 -95588261 + AT_rich Low_complexity Low_complexity 1 26 0 591 209 51 33 chr10 44729575 44729754 -95587011 - MIR SINE MIR -44 218 34 320 305 136 8 chr10 44729939 44730057 -95586708 + MIR SINE MIR 17 149 -59 6390 151 11 20 chr10 44730123 44731624 -95585141 + L1MB5 LINE L1 4195 5693 -607 463 226 21 0 chr10 44733921 44734014 -95582751 + MSTB1 LTR MaLR 271 365 -67 * 1426 145 29 21 chr10 44734009 44734251 -95582514 + MSTB LTR MaLR 183 426 0 6502 174 25 3 chr10 44734251 44735327 -95581438 + MSTB-int LTR MaLR 1 1100 -551 453 179 111 8 chr10 44735327 44735444 -95581321 + MSTB-int LTR MaLR 1518 1646 -5 2113 188 63 0 chr10 44735451 44735850 -95580915 + MSTB LTR MaLR 3 426 0 310 243 21 64 chr10 44737485 44737625 -95579140 - L2 LINE L2 -62 3251 3118 1110 141 11 6 chr10 44737708 44737885 -95578880 + L1MB5 LINE L1 5997 6174 0 281 171 45 36 chr10 44738037 44738148 -95578617 + (TA)n Simple_repeat Simple_repeat 1 112 0 326 198 22 22 chr10 44740150 44740241 -95576524 + MIR SINE MIR 54 144 -118 207 213 0 0 chr10 44740853 44740933 -95575832 + CT-rich Low_complexity Low_complexity 2 81 0 200 257 40 0 chr10 44740948 44741022 -95575743 + CT-rich Low_complexity Low_complexity 5 81 0 268 319 0 53 chr10 44741183 44741296 -95575469 + L2 LINE L2 2974 3080 -192 196 348 67 37 chr10 44741363 44741527 -95575238 + L2 LINE L2 3104 3272 0 903 255 38 17 chr10 44741566 44741856 -95574909 + L1MD3 LINE L1 7690 7985 -10 754 330 78 17 chr10 44742695 44743159 -95573606 - L3 LINE CR1 -101 1476 985 2549 149 19 21 chr10 44744588 44745058 -95571707 + L1MA4 LINE L1 5821 6289 -11 265 226 0 0 chr10 44746022 44746075 -95570690 - L2 LINE L2 0 3313 3261 213 310 48 21 chr10 44746133 44746278 -95570487 + L2 LINE L2 2369 2517 -797 192 97 0 0 chr10 44746768 44746799 -95569966 + (TTTTTG)n Simple_repeat Simple_repeat 3 33 0 252 243 180 9 chr10 44747175 44747286 -95569479 + L2 LINE L2 3140 3269 -3 1646 188 78 0 chr10 44747328 44747647 -95569118 - MER7A DNA MER2_type -4 342 1 26 30 0 0 chr10 44750355 44750388 -95566377 + AT_rich Low_complexity Low_complexity 1 33 0 1014 128 0 0 chr10 44751780 44751952 -95564813 + (CA)n Simple_repeat Simple_repeat 1 172 0 1581 197 56 19 chr10 44752902 44753189 -95563576 - MLT1B LTR MaLR 0 390 84 317 160 13 27 chr10 44753189 44753264 -95563501 - L1PA2 LINE L1 0 6155 6082 1581 197 56 19 chr10 44753264 44753352 -95563413 - MLT1B LTR MaLR -306 84 1 236 250 71 24 chr10 44756669 44756753 -95560012 + L1ME4a LINE L1 5384 5471 -650 334 307 42 13 chr10 44756998 44757174 -95559591 - MLT1J2 LTR MaLR -7 425 266 377 234 152 14 chr10 44757202 44757347 -95559418 - MLT1J2 LTR MaLR -284 166 2 288 272 29 88 chr10 44757348 44757415 -95559350 + L1ME4a LINE L1 5762 5819 -302 2524 67 0 0 chr10 44757415 44757713 -95559052 + AluY SINE Alu 1 298 -13 288 272 29 88 chr10 44757713 44757781 -95558984 + L1ME4a LINE L1 5819 5889 -232 33 66 0 0 chr10 44758927 44758988 -95557777 + AT_rich Low_complexity Low_complexity 1 61 0 258 365 183 0 chr10 44759108 44759305 -95557460 - MIR SINE MIR -22 240 8 31 0 0 0 chr10 44760212 44760243 -95556522 + AT_rich Low_complexity Low_complexity 1 31 0 1674 210 82 19 chr10 44760253 44760667 -95556098 - MER44D DNA MER2_type 0 605 111 424 314 65 42 chr10 44760765 44761071 -95555694 + L1M4 LINE L1 2851 3163 -2983 1708 171 67 24 chr10 44761803 44762177 -95554588 + MLT1B LTR MaLR 1 390 0 192 40 0 0 chr10 44762188 44762213 -95554552 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 955 266 41 41 chr10 44765157 44765386 -95551379 - MER93a LTR ERV1 -4 398 167 14663 132 25 22 chr10 44765386 44767795 -95548970 - Tigger1 DNA MER2_type 0 2418 2 955 266 41 41 chr10 44767795 44767929 -95548836 - MER93a LTR ERV1 -234 168 35 533 221 139 20 chr10 44768034 44768372 -95548393 + MLT1F LTR MaLR 123 555 0 408 263 75 15 chr10 44768551 44768684 -95548081 - MER3 DNA MER1_type -68 141 1 284 302 60 8 chr10 44771766 44772001 -95544764 + L1M4 LINE L1 4457 4703 -1443 1596 124 0 0 chr10 44772417 44772626 -95544139 + AluSx SINE Alu 1 209 -103 349 276 82 35 chr10 44772628 44772860 -95543905 + L1M4 LINE L1 5152 5394 -752 277 247 39 0 chr10 44772955 44773032 -95543733 - L1M4 LINE L1 -1576 4570 4491 2100 113 30 0 chr10 44773522 44773822 -95542943 - AluSq SINE Alu -4 309 1 366 23 0 0 chr10 44773974 44774017 -95542748 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 2042 132 3 3 chr10 44774780 44775075 -95541690 - AluSx SINE Alu -13 299 5 2008 140 0 0 chr10 44775093 44775378 -95541387 - AluSg SINE Alu -2 308 24 3419 252 79 36 chr10 44775488 44776038 -95540727 + L1M4 LINE L1 2153 2678 -3468 2541 146 31 24 chr10 44776038 44776463 -95540302 + MSTC LTR MaLR 1 428 0 3419 252 79 36 chr10 44776463 44777323 -95539442 + L1M4 LINE L1 2678 3624 -2522 755 175 7 29 chr10 44777336 44777473 -95539292 - AluJo SINE Alu -177 135 2 4194 166 36 84 chr10 44777489 44777768 -95538997 + L1MD1 LINE L1 5189 5480 -762 2425 42 42 0 chr10 44777768 44778054 -95538711 + AluY SINE Alu 1 298 -13 4194 166 36 84 chr10 44778054 44778888 -95537877 + L1MD1 LINE L1 5480 6242 0 267 31 0 0 chr10 44781233 44781265 -95535500 + (TG)n Simple_repeat Simple_repeat 1 32 0 2314 84 7 36 chr10 44781268 44781577 -95535188 - AluSx SINE Alu -12 300 1 263 377 40 23 chr10 44782035 44782210 -95534555 - MIR3 SINE MIR -1 207 30 530 254 97 55 chr10 44783443 44783616 -95533149 + MLT1G1 LTR MaLR 1 144 -386 214 167 0 0 chr10 44783628 44783664 -95533101 + CT-rich Low_complexity Low_complexity 1 36 0 549 249 87 17 chr10 44783681 44783955 -95532810 + MLT1G1 LTR MaLR 228 588 -7 2118 139 28 182 chr10 44784109 44784724 -95532041 + MLT2B3 LTR ERVL 6 518 -36 413 88 0 15 chr10 44784724 44784792 -95531973 + (TA)n Simple_repeat Simple_repeat 1 67 0 2118 139 28 182 chr10 44784792 44784825 -95531940 + MLT2B3 LTR ERVL 518 554 0 2208 161 11 0 chr10 44786524 44786904 -95529861 - MLT1B LTR MaLR -6 384 1 270 302 43 9 chr10 44787200 44787316 -95529449 - LTR16C LTR ERVL 0 491 372 602 298 84 13 chr10 44787582 44787820 -95528945 - MLT1L LTR MaLR -11 604 350 228 330 18 0 chr10 44787870 44787982 -95528783 - MLT1L LTR MaLR -345 270 157 210 118 0 0 chr10 44789660 44789694 -95527071 + (TC)n Simple_repeat Simple_repeat 1 34 0 187 327 58 19 chr10 44790655 44790759 -95526006 + MIR3 SINE MIR 59 166 -42 233 367 159 7 chr10 44790833 44791141 -95525624 + L2 LINE L2 2521 2875 -439 1278 200 32 71 chr10 44793533 44793686 -95523079 + MLT1A1 LTR MaLR 1 159 -206 2286 108 0 7 chr10 44793686 44793991 -95522774 + AluSc SINE Alu 1 303 -6 1278 200 32 71 chr10 44793991 44794217 -95522548 + MLT1A1 LTR MaLR 159 365 0 362 56 0 19 chr10 44795168 44795222 -95521543 + (TG)n Simple_repeat Simple_repeat 1 53 0 478 338 44 41 chr10 44795462 44796192 -95520573 - L1M4 LINE L1 -2056 4090 3359 370 363 33 24 chr10 44796758 44796876 -95519889 - MIR SINE MIR -1 261 139 1925 168 0 3 chr10 44796876 44797174 -95519591 - AluJb SINE Alu -15 297 1 370 363 33 24 chr10 44797174 44797267 -95519498 - MIR SINE MIR -123 139 48 275 284 25 0 chr10 44797450 44797531 -95519234 + MER117 DNA MER1_type 45 127 -70 1983 151 84 3 chr10 44797546 44797586 -95519179 - MLT2D LTR ERVL 0 414 379 504 48 0 0 chr10 44797586 44797649 -95519116 + (TA)n Simple_repeat Simple_repeat 1 63 0 1983 151 84 3 chr10 44797649 44797991 -95518774 - MLT2D LTR ERVL -35 379 1 651 211 108 0 chr10 44798022 44798188 -95518577 - MER5A DNA MER1_type 0 189 6 182 275 50 38 chr10 44798509 44798589 -95518176 - MIR SINE MIR -109 99 19 223 342 13 0 chr10 44798672 44798751 -95518014 + L3 LINE CR1 1352 1431 -146 337 237 35 26 chr10 44799493 44799607 -95517158 + MIR SINE MIR 32 146 -62 2412 81 0 40 chr10 44800108 44800429 -95516336 - AluY SINE Alu -3 308 1 315 0 0 0 chr10 44800956 44800991 -95515774 + (CA)n Simple_repeat Simple_repeat 2 36 0 1031 134 30 35 chr10 44802835 44802868 -95513897 + L1MA4A LINE L1 6092 6124 -179 2273 113 0 13 chr10 44802868 44803177 -95513588 - AluSx SINE Alu -7 305 1 1031 134 30 35 chr10 44803177 44803345 -95513420 + L1MA4A LINE L1 6124 6292 -11 23 0 0 0 chr10 44803349 44803372 -95513393 + AT_rich Low_complexity Low_complexity 1 23 0 1319 217 58 75 chr10 44803798 44804369 -95512396 + MER34B LTR ERV1 5 565 0 192 234 0 0 chr10 44804857 44804904 -95511861 + CT-rich Low_complexity Low_complexity 3 49 0 767 271 78 36 chr10 44808054 44808658 -95508107 - MER21B LTR ERV1 -101 830 118 463 198 12 0 chr10 44808716 44808802 -95507963 - MER21B LTR ERV1 -768 95 9 1018 270 91 40 chr10 44808910 44809143 -95507622 + L1ME2 LINE L1 5585 5805 -359 3028 157 0 2 chr10 44809143 44809679 -95507086 + L1PB1 LINE L1 5616 6150 -1 1018 270 91 40 chr10 44809679 44809963 -95506802 + L1ME2 LINE L1 5805 6134 -30 1894 167 74 60 chr10 44809963 44810466 -95506299 - LTR54 LTR ERV1 0 510 1 1018 270 91 40 chr10 44810466 44810499 -95506266 + L1ME2 LINE L1 6134 6164 0 303 244 24 0 chr10 44811064 44811146 -95505619 - L2 LINE L2 -1506 1808 1725 556 50 25 0 chr10 44811146 44811226 -95505539 + (TC)n Simple_repeat Simple_repeat 1 82 0 862 196 119 85 chr10 44811490 44811843 -95504922 + MLT1A1 LTR MaLR 1 365 0 336 311 20 40 chr10 44812249 44812397 -95504368 - L2 LINE L2 -5 3267 3123 2104 77 7 47 chr10 44812458 44812757 -95504008 + AluY SINE Alu 24 310 -1 1370 91 11 0 chr10 44812757 44812933 -95503832 + AluSg/x SINE Alu 134 311 -1 1628 209 73 15 chr10 44814581 44814993 -95501772 - MER63B DNA MER1_type 0 436 1 216 287 11 11 chr10 44816343 44816430 -95500335 - L2 LINE L2 -50 3222 3136 1282 213 45 77 chr10 44816615 44816978 -95499787 - L1MA4 LINE L1 0 6180 5807 903 160 59 11 chr10 44816978 44817165 -95499600 - L1MA4 LINE L1 -1 6299 6104 1369 35 0 0 chr10 44817165 44817328 -95499437 + L1PA4 LINE L1 5986 6155 0 1282 213 45 77 chr10 44817328 44817737 -95499028 - L1MA4 LINE L1 -371 5809 5445 219 139 0 0 chr10 44818874 44818910 -95497855 + (TA)n Simple_repeat Simple_repeat 2 37 0 603 244 141 44 chr10 44820542 44820964 -95495801 - MLT1H LTR MaLR -22 527 12 2197 136 0 13 chr10 44821092 44821408 -95495357 - AluJo SINE Alu 0 312 1 275 282 0 0 chr10 44821568 44821639 -95495126 - MIR SINE MIR -126 136 66 1218 189 24 132 chr10 44821927 44822345 -95494420 + MER93b LTR ERV1 1 373 0 431 269 41 29 chr10 44822766 44822937 -95493828 - MER5B DNA MER1_type -4 174 2 761 194 18 12 chr10 44822972 44823137 -95493628 - MER5B DNA MER1_type -12 166 1 2157 148 0 0 chr10 44823185 44823490 -95493275 - AluSx SINE Alu -1 311 7 718 189 38 0 chr10 44823991 44824150 -95492615 - MER5A DNA MER1_type -24 165 1 881 246 102 50 chr10 44824311 44824713 -95492052 + MLT1E2 LTR MaLR 8 430 -196 457 240 24 91 chr10 44825537 44825791 -95490974 - HAL1 LINE L1 0 2507 2271 1010 243 115 71 chr10 44825828 44826448 -95490317 - HAL1 LINE L1 -1169 1338 682 2399 120 5 19 chr10 44826448 44826816 -95489949 - THE1B LTR MaLR 0 364 2 1010 243 115 71 chr10 44826816 44826898 -95489867 - HAL1 LINE L1 -1825 682 605 1968 151 3 13 chr10 44829022 44829326 -95487439 + AluJb SINE Alu 1 301 -11 221 308 83 60 chr10 44829558 44829860 -95486905 - L2 LINE L2 -452 2862 2554 1676 238 109 19 chr10 44830205 44830671 -95486094 - MLT1F LTR MaLR -11 531 24 308 159 16 16 chr10 44831887 44831950 -95484815 + MIR SINE MIR 89 151 -111 359 189 64 0 chr10 44832397 44832498 -95484267 - MIR SINE MIR -63 145 36 267 31 0 0 chr10 44832498 44832530 -95484235 + (TCCCC)n Simple_repeat Simple_repeat 4 35 0 185 374 52 17 chr10 44832828 44832943 -95483822 - L3 LINE CR1 -143 1434 1316 342 261 9 27 chr10 44833929 44834040 -95482725 - MLT1L LTR MaLR -333 282 174 959 164 67 0 chr10 44834631 44834796 -95481969 + AluJb SINE Alu 136 311 -1 616 269 49 40 chr10 44835183 44835406 -95481359 + MIR SINE MIR 31 255 -7 502 274 137 5 chr10 44836208 44836398 -95480367 - MIR SINE MIR 0 262 48 227 242 45 15 chr10 44836854 44836920 -95479845 + LTR33A LTR ERVL 449 516 -7 199 256 49 37 chr10 44837131 44837213 -95479552 + L2 LINE L2 3173 3255 -58 294 309 46 40 chr10 44838814 44838966 -95477799 + MLT1K LTR MaLR 81 233 -355 1273 273 144 24 chr10 44839634 44840375 -95476390 + L1MEc LINE L1 49 878 -5518 502 224 176 0 chr10 44840387 44840552 -95476213 + L1MEc LINE L1 3020 3213 -3002 2120 133 13 0 chr10 44840554 44840854 -95475911 + AluSx SINE Alu 1 304 -8 365 218 0 27 chr10 44840869 44840979 -95475786 + GA-rich Low_complexity Low_complexity 4 110 0 3406 247 40 62 chr10 44840996 44841668 -95475097 + L1MEc LINE L1 3142 3827 -2388 2305 104 10 0 chr10 44841668 44841967 -95474798 - AluSq SINE Alu -9 304 3 3406 247 40 62 chr10 44841967 44842838 -95473927 + L1MEc LINE L1 3827 4651 -1564 213 219 109 0 chr10 44842842 44842906 -95473859 + L2 LINE L2 2255 2325 -989 227 171 0 0 chr10 44843009 44843050 -95473715 + L1ME LINE L1 5851 5891 -344 9502 238 66 37 chr10 44843342 44843588 -95473177 - L1M4c LINE L1 -744 6213 5976 2181 114 3 3 chr10 44843588 44843878 -95472887 - AluSx SINE Alu -17 295 6 9502 238 66 37 chr10 44843878 44844786 -95471979 - L1M4c LINE L1 -981 5976 5096 1809 167 20 0 chr10 44844786 44845079 -95471686 - AluJb SINE Alu -7 305 7 9502 238 66 37 chr10 44845079 44846268 -95470497 - L1M4c LINE L1 -1861 5096 3943 2262 121 10 0 chr10 44846268 44846575 -95470190 - AluSq SINE Alu -3 310 1 9502 238 66 37 chr10 44846575 44847511 -95469254 - L1M4c LINE L1 -3014 3943 3036 1352 165 49 3 chr10 44847511 44847739 -95469026 - L1MA4A LINE L1 -3 6300 6055 210 37 0 0 chr10 44847739 44847766 -95468999 + (TA)n Simple_repeat Simple_repeat 1 27 0 1352 165 49 3 chr10 44847766 44847822 -95468943 - L1MA4A LINE L1 -248 6055 6003 9502 238 66 37 chr10 44847822 44849437 -95467328 - L1M4c LINE L1 -3921 3036 1192 2697 260 50 75 chr10 44849830 44850898 -95465867 - L1M4c LINE L1 -5561 1298 31 289 295 84 0 chr10 44850994 44851089 -95465676 + MIR SINE MIR 47 149 -113 498 62 0 0 chr10 44851089 44851153 -95465612 - L1P LINE L1 -876 5270 5207 1737 54 0 0 chr10 44851153 44851376 -95465389 + L1PA5 LINE L1 5931 6154 0 299 222 0 32 chr10 44852844 44852907 -95463858 - L2 LINE L2 -5 3267 3207 305 245 168 7 chr10 44853271 44853414 -95463351 - MIR SINE MIR -51 211 46 186 231 0 103 chr10 44853488 44853551 -95463214 + MIR3 SINE MIR 114 169 -39 1389 207 55 22 chr10 44853551 44853913 -95462852 - MLT1A2 LTR MaLR 0 374 1 186 231 0 103 chr10 44853913 44853927 -95462838 + MIR3 SINE MIR 169 183 -25 670 268 119 44 chr10 44854994 44855078 -95461687 + MLT1L LTR MaLR 220 296 -319 1913 154 31 0 chr10 44855078 44855364 -95461401 + AluJb SINE Alu 6 300 -12 670 268 119 44 chr10 44855364 44855641 -95461124 + MLT1L LTR MaLR 296 608 -7 967 197 80 0 chr10 44855730 44855918 -95460847 + MER58A DNA MER1_type 21 223 -1 2044 168 40 15 chr10 44856126 44856530 -95460235 + MLT2C2 LTR ERVL 1 414 -50 459 52 0 0 chr10 44857838 44857896 -95458869 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1681 154 21 14 chr10 44858722 44859001 -95457764 + AluJo SINE Alu 14 294 -18 528 126 0 0 chr10 44859001 44859088 -95457677 + (GA)n Simple_repeat Simple_repeat 1 87 0 617 150 41 9 chr10 44859088 44859308 -95457457 + GA-rich Low_complexity Low_complexity 1 227 0 512 263 124 8 chr10 44860323 44860589 -95456176 - L2 LINE L2 -213 3100 2804 907 210 93 5 chr10 44860592 44860797 -95455968 + MER58A DNA MER1_type 2 224 0 642 259 62 59 chr10 44860798 44861185 -95455580 - MLT1J LTR MaLR -57 538 148 423 261 177 15 chr10 44861198 44861401 -95455364 + MER112 DNA MER1_type 17 252 -8 758 128 13 19 chr10 44861589 44861745 -95455020 + CT-rich Low_complexity Low_complexity 1 155 0 1897 164 17 17 chr10 44861945 44862304 -95454461 + L1PA16 LINE L1 5805 6163 -3 186 366 11 11 chr10 44862311 44862404 -95454361 + MIR SINE MIR 151 243 -19 319 200 26 65 chr10 44863710 44863865 -95452900 + (CGGGG)n Simple_repeat Simple_repeat 2 150 0 452 259 58 29 chr10 44864409 44864614 -95452151 - MIR SINE MIR -40 222 12 258 233 122 44 chr10 44864826 44864916 -95451849 - MIR SINE MIR -145 117 21 190 164 16 49 chr10 44865114 44865175 -95451590 + GA-rich Low_complexity Low_complexity 3 61 0 332 273 13 10 chr10 44865819 44865930 -95450835 - MIR SINE MIR -64 144 38 183 328 69 17 chr10 44866200 44866316 -95450449 - MIR3 SINE MIR -22 186 65 1332 156 13 4 chr10 44869135 44869366 -95447399 - LTR29 LTR ERV1 0 622 390 366 183 219 0 chr10 44869336 44869418 -95447347 - LTR49 LTR ERV1 -248 347 248 * 702 164 188 136 chr10 44869385 44869635 -95447130 - LTR49 LTR ERV1 -353 426 2 232 337 22 11 chr10 44870205 44870297 -95446468 - MIR3 SINE MIR -12 196 104 2306 133 133 38 chr10 44870502 44870952 -95445813 - MER41E LTR ERV1 -5 507 15 25 65 0 0 chr10 44871086 44871132 -95445633 + AT_rich Low_complexity Low_complexity 1 46 0 901 251 31 50 chr10 44871170 44871493 -95445272 - MLT1I LTR MaLR -18 391 75 282 340 35 47 chr10 44871789 44872045 -95444720 - L2 LINE L2 0 3272 3020 688 132 0 53 chr10 44873061 44873251 -95443514 + (TG)n Simple_repeat Simple_repeat 1 180 0 612 342 35 0 chr10 44873586 44873817 -95442948 + MIR SINE MIR 2 240 -22 654 235 30 20 chr10 44874605 44874743 -95442022 + Charlie5 DNA MER1_type 2414 2556 -68 2737 126 7 12 chr10 44874743 44875171 -95441594 - MSTB LTR MaLR 0 426 1 654 235 30 20 chr10 44875171 44875232 -95441533 + Charlie5 DNA MER1_type 2556 2615 -9 473 226 19 0 chr10 44875993 44876099 -95440666 - MER94 DNA DNA -25 109 2 389 304 7 22 chr10 44876484 44876622 -95440143 - Charlie8 DNA MER1_type -2179 238 103 422 262 99 17 chr10 44877603 44877775 -95438990 + MER5A DNA MER1_type 3 188 -1 251 286 13 1 chr10 44878446 44878529 -95438236 - MIR SINE MIR -64 144 62 28 61 0 0 chr10 44879177 44879226 -95437539 + GC_rich Low_complexity Low_complexity 1 49 0 434 220 0 33 chr10 44879526 44879708 -95437057 + C-rich Low_complexity Low_complexity 3 178 0 205 133 0 0 chr10 44880334 44880364 -95436401 - MIR SINE MIR -114 148 119 492 186 21 35 chr10 44881185 44881314 -95435451 - MIR SINE MIR -62 146 42 378 307 64 0 chr10 44882429 44882569 -95434196 + MIR SINE MIR 48 196 -66 497 330 145 19 chr10 44883449 44883960 -95432805 - L2 LINE L2 -1 3312 2685 209 33 33 0 chr10 44883960 44883990 -95432775 + (CTGGGG)n Simple_repeat Simple_repeat 1 31 0 188 258 76 0 chr10 44884701 44884767 -95431998 + L2 LINE L2 2974 3044 -228 1470 140 23 19 chr10 44885339 44885604 -95431161 + L1MB1 LINE L1 5902 6167 -1 22 0 0 0 chr10 44887160 44887182 -95429583 + AT_rich Low_complexity Low_complexity 1 22 0 223 217 72 43 chr10 44888701 44888770 -95427995 + MIR SINE MIR 78 148 -114 2155 108 24 0 chr10 44891217 44891505 -95425260 - AluSg SINE Alu -15 295 1 629 140 9 0 chr10 44892021 44892128 -95424637 + Tigger1 DNA MER2_type 50 157 -2261 * 1151 159 19 5 chr10 44892123 44892331 -95424434 + Tigger1 DNA MER2_type 2208 2418 0 502 288 38 9 chr10 44892528 44892703 -95424062 + MIR SINE MIR 40 214 -4 1369 223 89 50 chr10 44894604 44895161 -95421604 - MER34B LTR ERV1 0 565 2 275 301 114 18 chr10 44897222 44897388 -95419377 - MIR3 SINE MIR -12 196 15 237 250 18 0 chr10 44899446 44899502 -95417263 - L2 LINE L2 -23 3249 3193 333 47 0 0 chr10 44901092 44901135 -95415630 + (TG)n Simple_repeat Simple_repeat 1 43 0 650 180 115 66 chr10 44901501 44901632 -95415133 + MIR SINE MIR 5 149 -113 4122 174 63 33 chr10 44901632 44902470 -95414295 - MER21B LTR ERV1 0 863 1 650 180 115 66 chr10 44902470 44902521 -95414244 + MIR SINE MIR 149 196 -66 340 207 0 0 chr10 44903029 44903087 -95413678 + MIR SINE MIR 205 262 0 215 313 60 0 chr10 44903625 44903692 -95413073 - MIR SINE MIR -23 239 169 281 310 73 42 chr10 44903779 44903981 -95412784 + MIR SINE MIR 15 220 -42 403 301 0 0 chr10 44903995 44904088 -95412677 - L2 LINE L2 0 3313 3221 * 1988 255 74 34 chr10 44904069 44904743 -95412022 - L2 LINE L2 -480 2834 2134 246 291 117 34 chr10 44904823 44905002 -95411763 + MIR SINE MIR 17 210 -52 36 82 0 0 chr10 44905552 44905625 -95411140 + GC_rich Low_complexity Low_complexity 1 73 0 25 31 0 0 chr10 44905672 44905704 -95411061 + GC_rich Low_complexity Low_complexity 1 32 0 319 234 54 45 chr10 44905794 44905905 -95410860 - MIR SINE MIR -37 225 114 333 249 296 12 chr10 44906037 44906206 -95410559 + MIR SINE MIR 19 235 -27 201 338 0 28 chr10 44906339 44906410 -95410355 + L2 LINE L2 3204 3272 0 270 0 0 0 chr10 44910977 44911007 -95405758 + (T)n Simple_repeat Simple_repeat 1 30 0 783 238 147 7 chr10 44912614 44912900 -95403865 + L1MC4a LINE L1 5404 5729 -2079 1571 140 86 7 chr10 44913306 44913598 -95403167 - MER46B DNA MER2_type 0 236 47 4987 16 0 3 chr10 44913606 44914171 -95402594 - L1PA3 LINE L1 0 6155 5593 193 342 50 17 chr10 44914172 44914292 -95402473 + L2 LINE L2 2857 2980 -292 1904 230 43 86 chr10 44914302 44914743 -95402022 + MLT1E LTR MaLR 12 421 -172 3912 166 33 11 chr10 44914743 44915212 -95401553 - L1MA5 LINE L1 0 6300 5808 1882 146 34 7 chr10 44915212 44915507 -95401258 - AluJo SINE Alu -8 304 2 3912 166 33 11 chr10 44915507 44915758 -95401007 - L1MA5 LINE L1 -492 5808 5564 1904 230 43 86 chr10 44915758 44915924 -95400841 + MLT1E LTR MaLR 421 593 0 2279 118 0 6 chr10 44916076 44916390 -95400375 - AluSx SINE Alu 0 312 1 827 204 122 0 chr10 44917212 44917393 -95399372 + MLT1E2 LTR MaLR 399 601 -25 1925 199 42 31 chr10 44917443 44917900 -95398865 + MLT1C LTR MaLR 6 467 0 2592 191 25 44 chr10 44918125 44918188 -95398577 - MLT2B2 LTR ERVL -2 513 450 2241 122 0 3 chr10 44918188 44918491 -95398274 - AluSx SINE Alu -10 302 1 2592 191 25 44 chr10 44918491 44918950 -95397815 - MLT2B2 LTR ERVL -65 450 1 2002 141 3 13 chr10 44919365 44919678 -95397087 + AluSx SINE Alu 1 310 -2 337 293 79 7 chr10 44920285 44920425 -95396340 + L1MC4a LINE L1 6683 6832 -976 932 153 68 0 chr10 44920937 44921100 -95395665 + Tigger1 DNA MER2_type 1 174 -2244 8420 110 40 25 chr10 44921100 44921302 -95395463 + Tigger1 DNA MER2_type 380 577 -1841 2421 116 0 0 chr10 44921302 44921613 -95395152 - AluSx SINE Alu -1 311 1 8420 110 40 25 chr10 44921613 44922792 -95393973 + Tigger1 DNA MER2_type 577 1782 -636 206 279 180 18 chr10 44924247 44924358 -95392407 + MIR SINE MIR 16 144 -64 246 318 24 0 chr10 44925051 44925136 -95391629 + MIR SINE MIR 60 146 -116 254 288 89 27 chr10 44925332 44925478 -95391287 - MIR3 SINE MIR -20 188 34 192 206 0 0 chr10 44925733 44925767 -95390998 + MIR SINE MIR 110 143 -65 249 33 0 0 chr10 44925944 44925974 -95390791 + (CA)n Simple_repeat Simple_repeat 1 30 0 332 367 33 28 chr10 44927808 44928023 -95388742 - MIR SINE MIR -36 226 11 380 316 39 19 chr10 44928467 44928622 -95388143 - MIR SINE MIR -65 197 40 235 219 134 24 chr10 44929684 44929766 -95386999 + MIR SINE MIR 143 233 -29 187 352 73 58 chr10 44930023 44930350 -95386415 + L3 LINE CR1 1004 1335 -242 2136 132 51 28 chr10 44930401 44930757 -95386008 - THE1B LTR MaLR 0 364 1 3212 227 63 23 chr10 44930868 44931190 -95385575 + L1M4 LINE L1 3524 3832 -2314 1661 149 116 30 chr10 44931190 44931526 -95385239 + MLT1A1 LTR MaLR 1 365 0 3212 227 63 23 chr10 44931526 44932238 -95384527 + L1M4 LINE L1 3832 4599 -1547 654 265 19 37 chr10 44935446 44935661 -95381104 - MLT1G LTR MaLR -2 588 378 592 125 0 18 chr10 44935792 44935904 -95380861 + (TC)n Simple_repeat Simple_repeat 2 111 0 240 121 0 0 chr10 44935927 44935960 -95380805 - MLT1G LTR MaLR -314 276 244 223 347 71 0 chr10 44937569 44937667 -95379098 - MIR SINE MIR -110 152 48 224 240 156 42 chr10 44938098 44938194 -95378571 - MIR SINE MIR -75 133 27 * 536 242 81 27 chr10 44938156 44938344 -95378421 + MIR SINE MIR 31 227 -35 564 233 0 0 chr10 44938377 44938549 -95378216 + (CA)n Simple_repeat Simple_repeat 1 172 0 573 223 0 0 chr10 44938710 44938876 -95377889 + (CA)n Simple_repeat Simple_repeat 2 167 0 279 300 76 11 chr10 44938937 44939082 -95377683 + MIR3 SINE MIR 33 156 -52 747 232 0 0 chr10 44940820 44941126 -95375639 + (TCCA)n Simple_repeat Simple_repeat 1 306 0 924 206 0 0 chr10 44941154 44941480 -95375285 + (TCCA)n Simple_repeat Simple_repeat 1 326 0 487 347 68 7 chr10 44941586 44941820 -95374945 - MIR SINE MIR -10 252 9 818 205 50 104 chr10 44942996 44943255 -95373510 + MIR SINE MIR 17 261 -1 566 265 61 17 chr10 44943357 44943538 -95373227 - MIR SINE MIR 0 262 74 312 220 73 28 chr10 44943898 44944007 -95372758 - MER5A DNA MER1_type -70 119 6 405 299 92 17 chr10 44945743 44945917 -95370848 - MER91A DNA MER1_type -4 192 6 221 224 206 19 chr10 44950163 44950270 -95366495 + MIR3 SINE MIR 5 131 -77 337 91 0 30 chr10 44950627 44950693 -95366072 - L1MB8 LINE L1 0 6178 6115 1738 167 0 3 chr10 44950697 44950984 -95365781 + AluJb SINE Alu 1 286 -26 27 0 0 0 chr10 44950989 44951016 -95365749 + AT_rich Low_complexity Low_complexity 1 27 0 414 129 0 29 chr10 44951043 44951113 -95365652 - AluSc SINE Alu -18 291 224 43681 35 23 1 chr10 44951213 44957127 -95359638 - L1PA3 LINE L1 -108 6047 2 228 200 0 0 chr10 44957136 44957176 -95359589 - Tigger4(Zombi) DNA MER2_type -2691 40 1 278 348 19 43 chr10 44957430 44957591 -95359174 + L2 LINE L2 1737 1893 -1421 346 319 8 8 chr10 44958105 44958224 -95358541 + MIR3 SINE MIR 3 121 -87 209 176 0 20 chr10 44958550 44958601 -95358164 + GA-rich Low_complexity Low_complexity 3 52 0 337 260 66 61 chr10 44958613 44958794 -95357971 - MARNA DNA Mariner -357 229 48 3226 148 43 19 chr10 44958935 44959514 -95357251 - Tigger1 DNA MER2_type -1 2417 1825 606 149 32 0 chr10 44959938 44960032 -95356733 - FLAM_C SINE Alu -21 122 26 1252 227 12 27 chr10 44960035 44960365 -95356400 - L1MC4 LINE L1 -476 7566 7242 461 62 0 0 chr10 44960379 44960444 -95356321 - MER41B LTR ERV1 -88 547 483 923 147 0 0 chr10 44960625 44960768 -95355997 - FLAM_C SINE Alu 0 143 1 288 304 11 0 chr10 44961587 44961679 -95355086 - L1ME2 LINE L1 -26 6138 6046 5757 162 17 7 chr10 44962329 44963907 -95352858 + L1MA7 LINE L1 4691 6287 -4 507 217 19 32 chr10 44963921 44964078 -95352687 + L1MDa LINE L1 1935 2089 -4451 390 279 73 52 chr10 44964086 44964343 -95352422 + MLT1H LTR MaLR 173 429 -113 734 246 21 5 chr10 44964369 44964618 -95352147 + L1ME LINE L1 5170 5421 -753 * 1103 244 34 24 chr10 44964614 44964991 -95351774 + L1ME2 LINE L1 5793 6334 0 23 0 0 0 chr10 44965072 44965095 -95351670 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 44965602 44965628 -95351137 + AT_rich Low_complexity Low_complexity 1 26 0 1229 151 0 5 chr10 44965771 44965983 -95350782 + L1MA2 LINE L1 6094 6304 0 21 0 0 0 chr10 44966436 44966457 -95350308 + AT_rich Low_complexity Low_complexity 1 21 0 1433 178 78 4 chr10 44967038 44967319 -95349446 + AluJo SINE Alu 1 302 -10 721 152 16 0 chr10 44968126 44968251 -95348514 - AluSq SINE Alu 0 313 187 * 795 126 0 0 chr10 44968250 44968361 -95348404 - AluSq SINE Alu -200 112 2 438 259 137 29 chr10 44968478 44968683 -95348082 - L1MC5 LINE L1 -20 7941 7715 4016 124 20 0 chr10 44968706 44969317 -95347448 - L1PA11 LINE L1 0 6174 5552 309 26 0 0 chr10 44970791 44970829 -95345936 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 289 338 49 7 chr10 44972273 44972415 -95344350 + L2 LINE L2 2722 2869 -445 2787 13 0 0 chr10 44973019 44973332 -95343433 + AluYb8 SINE Alu 1 313 -5 6942 68 32 0 chr10 44974881 44975750 -95341015 + MER11D LTR ERVK 1 897 0 38 22 0 0 chr10 44975832 44975877 -95340888 + AT_rich Low_complexity Low_complexity 1 45 0 293 344 32 5 chr10 44976017 44976238 -95340527 + L1ME LINE L1 5510 5736 -385 757 130 0 0 chr10 44976511 44976619 -95340146 - AluSg/x SINE Alu -120 192 85 1751 160 13 3 chr10 44976619 44976919 -95339846 - L1MB3 LINE L1 -32 6151 5849 1310 199 29 4 chr10 44977150 44977426 -95339339 - L1MB3 LINE L1 -325 5858 5576 1830 143 159 8 chr10 44977491 44977863 -95338902 - MSTA LTR MaLR 0 428 1 1652 182 3 10 chr10 44978395 44978702 -95338063 - AluJo SINE Alu -7 305 1 203 158 0 26 chr10 44978886 44978924 -95337841 + G-rich Low_complexity Low_complexity 1 37 0 1338 155 10 110 chr10 44979042 44979183 -95337582 + AluJo SINE Alu 2 97 -215 2224 110 0 0 chr10 44979183 44979492 -95337273 + AluSc SINE Alu 1 309 0 1338 155 10 110 chr10 44979492 44979660 -95337105 + AluJo SINE Alu 97 280 -32 180 0 0 0 chr10 44979662 44979682 -95337083 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 330 26 0 0 chr10 44979681 44979720 -95337045 + (CA)n Simple_repeat Simple_repeat 1 39 0 2174 70 0 18 chr10 44980118 44980444 -95336321 - AluY SINE Alu 0 321 1 214 333 64 64 chr10 44981449 44981512 -95335253 + MIR SINE MIR 34 96 -166 1417 160 9 118 chr10 44981512 44981683 -95335082 - AluJo SINE Alu -6 296 108 1999 66 0 16 chr10 44981683 44981941 -95334824 - AluY SINE Alu -17 294 41 2037 96 4 0 chr10 44981943 44982213 -95334552 - AluSq SINE Alu -15 298 28 1417 160 9 118 chr10 44982213 44982257 -95334508 - AluJo SINE Alu -195 107 1 702 177 0 0 chr10 44982257 44982370 -95334395 - FLAM_C SINE Alu -30 113 1 214 333 64 64 chr10 44982370 44982462 -95334303 + MIR SINE MIR 95 189 -73 569 333 98 27 chr10 44982797 44982944 -95333821 - L2 LINE L2 0 3313 3178 2254 122 0 0 chr10 44982944 44983256 -95333509 + AluSx SINE Alu 1 312 0 569 333 98 27 chr10 44983256 44983474 -95333291 - L2 LINE L2 -135 3178 2922 1912 155 0 7 chr10 44984521 44984825 -95331940 - AluJo SINE Alu -10 302 1 1809 174 62 36 chr10 44985628 44986014 -95330751 - MSTD LTR MaLR 0 396 1 5753 119 19 13 chr10 44986320 44987690 -95329075 - L1MA3 LINE L1 -56 6249 4872 2279 131 37 0 chr10 44987690 44988071 -95328694 + Harlequin LTR ERV1 2615 3009 -3887 2984 219 5 10 chr10 44988125 44988884 -95327881 + Harlequin LTR ERV1 3385 5906 -743 2865 99 176 16 chr10 44989041 44989587 -95327178 + LTR10E LTR ERV1 1 633 0 226 227 0 0 chr10 44989671 44989715 -95327050 + CT-rich Low_complexity Low_complexity 2 45 0 300 240 160 20 chr10 44990053 44990153 -95326612 + MIR SINE MIR 37 150 -112 765 206 20 0 chr10 44990451 44990597 -95326168 - AluJo/FRAM SINE Alu -33 279 131 1098 149 43 112 chr10 44990598 44990771 -95325994 - AluJb SINE Alu -1 301 118 2411 84 0 10 chr10 44990771 44991082 -95325683 - AluSc SINE Alu -1 308 1 324 0 0 0 chr10 44991086 44991122 -95325643 + (TTG)n Simple_repeat Simple_repeat 1 36 0 1098 149 43 112 chr10 44991122 44991265 -95325500 - AluJb SINE Alu -187 115 2 2307 103 0 16 chr10 44991268 44991580 -95325185 - AluSc SINE Alu 0 309 3 2031 110 3 49 chr10 44991580 44991888 -95324877 - AluSx SINE Alu -18 294 1 772 193 0 21 chr10 44992369 44992514 -95324251 - AluJb SINE Alu -170 142 1 703 124 0 0 chr10 44992549 44992646 -95324119 - AluSx SINE Alu -27 283 187 1082 116 0 0 chr10 44992646 44992784 -95323981 - AluSx SINE Alu -175 138 1 220 208 75 0 chr10 44992856 44992909 -95323856 + L2 LINE L2 3257 3313 0 207 204 0 0 chr10 44994021 44994065 -95322700 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 210 91 0 0 chr10 44995762 44995795 -95320970 + (T)n Simple_repeat Simple_repeat 1 33 0 195 292 42 31 chr10 44996510 44996606 -95320159 + L3 LINE CR1 375 471 -1106 341 286 214 19 chr10 44996698 44996904 -95319861 + L3 LINE CR1 510 755 -822 412 290 177 11 chr10 44997054 44997240 -95319525 + MIR SINE MIR 46 262 0 661 189 16 8 chr10 44997294 44997421 -95319344 + AluJo SINE Alu 7 134 -178 489 358 82 24 chr10 44997464 44997841 -95318924 + L3 LINE CR1 803 1201 -376 1439 147 0 30 chr10 44997891 44998150 -95318615 - AluSg SINE Alu 0 310 59 636 175 0 0 chr10 44998157 44998254 -95318511 - FLAM_C SINE Alu -18 125 29 1634 219 43 29 chr10 44998300 44998785 -95317980 - MER74B LTR ERVL -73 549 58 448 284 114 28 chr10 44998800 44999054 -95317711 + L3 LINE CR1 1301 1576 -1 259 276 11 23 chr10 44999555 44999642 -95317123 + MIR3 SINE MIR 120 205 -3 214 311 78 10 chr10 44999765 44999868 -95316897 - MIR SINE MIR -94 168 59 1038 114 19 0 chr10 45000311 45000469 -95316296 - L1MA3 LINE L1 -4 6301 6141 542 262 13 27 chr10 45001288 45001437 -95315328 + MIR SINE MIR 116 262 0 183 80 0 0 chr10 45001647 45001672 -95315093 + (TG)n Simple_repeat Simple_repeat 2 26 0 497 175 10 0 chr10 45002135 45002238 -95314527 + CT-rich Low_complexity Low_complexity 4 107 0 325 348 71 74 chr10 45002279 45002618 -95314147 - L2 LINE L2 -17 3255 2918 282 278 75 42 chr10 45002894 45003225 -95313540 - L1MEc LINE L1 -1014 5115 4774 289 280 91 6 chr10 45003292 45003467 -95313298 - L1MEc LINE L1 -1459 4670 4481 22 56 0 0 chr10 45003487 45003523 -95313242 + AT_rich Low_complexity Low_complexity 1 36 0 2090 274 73 13 chr10 45003831 45004790 -95311975 + L1ME LINE L1 106 1015 -4963 1384 165 77 12 chr10 45004812 45005060 -95311705 + AluJb SINE Alu 35 298 -14 1044 252 75 65 chr10 45005078 45005705 -95311060 + L1ME LINE L1 1181 1813 -4448 298 310 41 14 chr10 45005772 45005917 -95310848 - L1MEc LINE L1 -1899 4230 4082 25 0 0 0 chr10 45006035 45006060 -95310705 + AT_rich Low_complexity Low_complexity 1 25 0 1879 100 0 15 chr10 45006078 45006338 -95310427 - AluSx SINE Alu -1 311 56 265 285 73 42 chr10 45006348 45006706 -95310059 - L1MEc LINE L1 -2354 3775 3407 858 66 8 0 chr10 45006706 45006828 -95309937 + MSTA LTR MaLR 1 123 -305 795 290 113 54 chr10 45006892 45007598 -95309167 - L1MEc LINE L1 -2749 3380 2633 451 287 70 42 chr10 45007612 45007794 -95308971 - L1MEc LINE L1 -3750 2417 2242 1581 197 16 3 chr10 45007794 45008098 -95308667 - AluJo SINE Alu -4 308 1 451 287 70 42 chr10 45008098 45008212 -95308553 - L1MEc LINE L1 -3925 2242 2102 2261 116 10 3 chr10 45008212 45008522 -95308243 - AluSx SINE Alu 0 312 1 451 287 70 42 chr10 45008522 45008557 -95308208 - L1MEc LINE L1 -4065 2102 2069 22 0 0 0 chr10 45008857 45008879 -95307886 + AT_rich Low_complexity Low_complexity 1 22 0 560 310 81 45 chr10 45008987 45009448 -95307317 - L1MEc LINE L1 -892 1598 1174 305 297 120 56 chr10 45009494 45009851 -95306914 - L1MEc LINE L1 -5064 1055 676 1581 174 16 23 chr10 45010489 45010793 -95305972 + AluJo SINE Alu 1 302 -10 2783 94 3 0 chr10 45011635 45011998 -95304767 + THE1B LTR MaLR 1 364 0 3538 58 40 8 chr10 45014109 45014609 -95302156 + LTR61 LTR ERV1 79 594 -1 401 250 125 8 chr10 45014623 45014751 -95302014 - MIR SINE MIR -15 247 105 414 222 146 35 chr10 45015288 45015459 -95301306 + L2 LINE L2 3074 3263 -50 208 167 19 19 chr10 45015485 45015539 -95301226 + (TA)n Simple_repeat Simple_repeat 1 54 0 2042 133 28 0 chr10 45015576 45015862 -95300903 - AluSq SINE Alu -19 294 1 1736 111 14 34 chr10 45015929 45016226 -95300539 + MER47A DNA MER2_type 76 366 0 347 328 0 0 chr10 45016679 45016807 -95299958 - L1 LINE L1 -3072 3074 2947 1048 115 27 0 chr10 45016811 45016994 -95299771 - L1MA5 LINE L1 -1 6299 6112 2247 131 0 0 chr10 45016996 45017308 -95299457 + AluSq SINE Alu 1 312 -1 4019 69 11 117 chr10 45017325 45018019 -95298746 + L1PB1 LINE L1 5531 6151 0 420 312 109 26 chr10 45018226 45018492 -95298273 - L1 LINE L1 -3319 2827 2540 276 225 56 22 chr10 45018601 45018690 -95298075 - MIR SINE MIR -170 92 1 1604 253 67 76 chr10 45019996 45020618 -95296147 + L2 LINE L2 2094 2711 -603 1684 199 0 14 chr10 45020618 45020915 -95295850 + AluJo SINE Alu 1 293 -19 1604 253 67 76 chr10 45020915 45020963 -95295802 + L2 LINE L2 2711 2758 -556 1696 211 69 26 chr10 45020964 45021428 -95295337 - MLT1D LTR MaLR 0 505 22 703 253 169 17 chr10 45021431 45021895 -95294870 + L2 LINE L2 2755 3313 0 359 316 90 30 chr10 45022793 45023027 -95293738 + MIR SINE MIR 15 262 0 291 300 18 27 chr10 45023620 45023730 -95293035 - MER5B DNA MER1_type -69 109 1 1964 146 3 10 chr10 45023749 45024050 -95292715 - AluJb SINE Alu -13 299 1 213 235 0 0 chr10 45024490 45024541 -95292224 - L2 LINE L2 -73 3240 3190 1409 150 52 17 chr10 45026726 45026959 -95289806 - AluJo SINE Alu -15 297 57 28 0 0 0 chr10 45027408 45027436 -95289329 + AT_rich Low_complexity Low_complexity 1 28 0 2174 83 55 3 chr10 45027832 45028121 -95288644 + AluSg SINE Alu 1 304 -6 1872 224 37 10 chr10 45028346 45028837 -95287928 + LTR22 LTR ERVK 1 504 -5 36 40 0 0 chr10 45028945 45028995 -95287770 + AT_rich Low_complexity Low_complexity 1 50 0 869 142 0 0 chr10 45029971 45030098 -95286667 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr10 45030251 45030279 -95286486 + AT_rich Low_complexity Low_complexity 1 28 0 621 181 0 0 chr10 45030714 45030819 -95285946 - U6 snRNA snRNA -2 105 1 213 347 91 25 chr10 45032607 45032806 -95283959 - MIR SINE MIR -31 231 20 23 78 0 0 chr10 45032891 45032942 -95283823 + AT_rich Low_complexity Low_complexity 1 51 0 2001 143 0 14 chr10 45033073 45033367 -95283398 - AluSx SINE Alu -21 291 2 26 30 0 0 chr10 45033657 45033690 -95283075 + AT_rich Low_complexity Low_complexity 1 33 0 224 355 92 0 chr10 45034101 45034177 -95282588 + L2 LINE L2 3140 3222 -50 22 70 0 0 chr10 45035088 45035131 -95281634 + AT_rich Low_complexity Low_complexity 1 43 0 264 311 19 0 chr10 45035186 45035292 -95281473 - MER102b DNA MER1_type -1 340 233 545 301 85 44 chr10 45036350 45036608 -95280157 + MIR SINE MIR 2 262 0 368 250 13 40 chr10 45036697 45036849 -95279916 + MER104 DNA Tc2 3 150 -30 44 35 0 0 chr10 45036984 45037042 -95279723 + AT_rich Low_complexity Low_complexity 1 58 0 2091 122 3 0 chr10 45038968 45039263 -95277502 - AluSx SINE Alu -16 296 1 2172 125 0 12 chr10 45040678 45041021 -95275744 - L1PA12 LINE L1 0 6168 5830 400 171 24 0 chr10 45042614 45042696 -95274069 + AluY SINE Alu 3 86 -232 1210 209 13 49 chr10 45042914 45043221 -95273544 + AluSg SINE Alu 3 298 -2 1214 229 4 8 chr10 45044398 45044643 -95272122 + AluJo SINE Alu 1 244 -68 316 194 0 0 chr10 45044654 45044721 -95272044 - L1MC/D LINE L1 -804 5529 5463 297 51 0 0 chr10 45044782 45044821 -95271944 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1742 253 118 15 chr10 45044942 45045873 -95270892 - L1MC/D LINE L1 -745 5401 4472 1519 106 17 4 chr10 45046052 45046288 -95270477 + THE1C LTR MaLR 137 375 0 8755 214 70 49 chr10 45046795 45049012 -95267753 + L1MC2 LINE L1 12 2180 -4582 2301 83 0 7 chr10 45049012 45049300 -95267465 + AluY SINE Alu 1 286 -25 8755 214 70 49 chr10 45049300 45050344 -95266421 + L1MC2 LINE L1 2180 3200 -3562 2350 84 0 0 chr10 45050344 45050643 -95266122 + AluY SINE Alu 1 299 -12 8755 214 70 49 chr10 45050643 45050732 -95266033 + L1MC2 LINE L1 3200 3286 -3476 240 75 25 0 chr10 45050732 45050772 -95265993 - MADE1 DNA Mariner -37 43 3 8755 214 70 49 chr10 45050772 45053750 -95263015 + L1MC2 LINE L1 3286 6591 -171 1518 114 0 23 chr10 45053750 45053969 -95262796 + AluSg/x SINE Alu 84 297 -13 8755 214 70 49 chr10 45053969 45054144 -95262621 + L1MC2 LINE L1 6591 6761 -1 709 260 115 0 chr10 45054825 45055025 -95261740 + MIR SINE MIR 17 239 -23 2024 156 0 3 chr10 45055192 45055499 -95261266 - AluSx SINE Alu -6 306 1 2182 102 26 10 chr10 45056276 45056580 -95260185 + AluSq SINE Alu 1 309 -4 1320 185 50 0 chr10 45057094 45057332 -95259433 + AluJb SINE Alu 40 289 -23 505 200 36 9 chr10 45057445 45057555 -95259210 + Tigger3(Golem) DNA MER2_type 2916 3028 -1 778 179 113 0 chr10 45057558 45057726 -95259039 - MIR SINE MIR -2 260 74 2348 99 0 13 chr10 45058358 45058670 -95258095 + AluSx SINE Alu 1 308 -4 929 209 62 19 chr10 45059176 45059386 -95257379 - AluJo SINE Alu -12 300 82 396 248 103 69 chr10 45059676 45059936 -95256829 - MIR SINE MIR -2 260 3 1788 159 3 14 chr10 45060358 45060653 -95256112 + AluJo SINE Alu 6 297 -15 271 368 58 65 chr10 45061732 45062131 -95254634 - L2 LINE L2 -5 3267 2872 1160 196 123 31 chr10 45063637 45064020 -95252745 - L1MC4 LINE L1 -418 7624 7207 1095 257 4 8 chr10 45064730 45064975 -95251790 + AluJo SINE Alu 1 244 -68 299 237 13 0 chr10 45064976 45065052 -95251713 - L1MC/D LINE L1 -794 5539 5463 2230 229 62 17 chr10 45065243 45066206 -95250559 - L1MC/D LINE L1 -753 5393 4472 22759 132 13 4 chr10 45066485 45070197 -95246568 - HERVK3 LTR ERVK -1905 5338 1593 752 174 8 0 chr10 45070187 45070319 -95246446 - HERVK3 LTR ERVK -3825 3418 3286 * 6392 208 10 10 chr10 45070315 45071826 -95244939 - HERVK3 LTR ERVK -5656 1587 40 2390 92 6 0 chr10 45071826 45072162 -95244603 - LTR3 LTR ERVK 0 432 95 896 53 23 0 chr10 45072165 45072298 -95244467 + LTR19-int LTR ERV1 2122 2257 -3329 418 171 159 0 chr10 45072298 45072386 -95244379 - LTR8 LTR ERV1 -434 257 156 9934 89 22 35 chr10 45072386 45073906 -95242859 + LTR19A-int LTR ERV1 2346 3884 -1702 4309 43 0 4 chr10 45073906 45074437 -95242328 - L1PA4 LINE L1 -4 6151 5623 9934 89 22 35 chr10 45074437 45075206 -95241559 + LTR19A-int LTR ERV1 3884 4528 -1058 2179 114 0 0 chr10 45075206 45075496 -95241269 - AluY SINE Alu -21 290 1 9934 89 22 35 chr10 45075496 45075587 -95241178 + LTR19A-int LTR ERV1 4528 4619 -967 5171 73 47 0 chr10 45075586 45076314 -95240451 + LTR19A-int LTR ERV1 4824 5585 -1 * 1353 92 70 22 chr10 45076315 45076543 -95240222 + LTR19A LTR ERV1 1 239 -247 738 49 10 0 chr10 45076524 45076626 -95240139 + LTR19A LTR ERV1 384 486 0 * 905 120 28 114 chr10 45076626 45076876 -95239889 - MER4A LTR ERV1 -117 547 261 533 143 10 10 chr10 45076876 45076974 -95239791 - MER4A LTR ERV1 -566 98 1 4081 196 65 14 chr10 45077189 45078413 -95238352 - L1MD1 LINE L1 0 6242 4939 336 111 0 0 chr10 45078413 45078467 -95238298 + (TG)n Simple_repeat Simple_repeat 1 54 0 4081 196 65 14 chr10 45078467 45078501 -95238264 - L1MD1 LINE L1 -1303 4939 4908 3442 152 7 16 chr10 45078493 45079171 -95237594 - L1 LINE L1 -1965 5202 4531 * 28216 96 8 7 chr10 45079163 45085334 -95231431 - L1PA6 LINE L1 0 6154 11 2026 278 51 15 chr10 45085347 45086840 -95229925 - L1 LINE L1 -4161 3007 1587 329 329 32 52 chr10 45087688 45087843 -95228922 - L1 LINE L1 -5981 1117 966 880 157 43 27 chr10 45087907 45088092 -95228673 - L1MB5 LINE L1 0 6174 5987 651 181 19 19 chr10 45088092 45088252 -95228513 + L1M4 LINE L1 5627 5786 -388 3150 98 33 12 chr10 45088678 45089157 -95227608 - LTR15 LTR ERV1 -4 489 1 8694 40 15 208 chr10 45090149 45091860 -95224905 - SVA Other Other -4 1382 1 687 139 16 8 chr10 45092589 45092711 -95224054 - AluSx SINE Alu -2 310 188 806 125 0 0 chr10 45092711 45092823 -95223942 - AluSx SINE Alu -201 112 1 362 263 137 29 chr10 45092939 45093144 -95223621 - L1MC5 LINE L1 -20 7941 7715 3928 126 20 0 chr10 45093167 45093778 -95222987 - L1PA11 LINE L1 0 6174 5552 309 26 0 0 chr10 45095252 45095290 -95221475 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 293 338 49 7 chr10 45096734 45096876 -95219889 + L2 LINE L2 2722 2869 -445 2863 13 0 0 chr10 45097480 45097793 -95218972 + AluYb8 SINE Alu 1 313 -5 6641 75 32 0 chr10 45099338 45100207 -95216558 + MER11D LTR ERVK 1 897 0 38 22 0 0 chr10 45100289 45100334 -95216431 + AT_rich Low_complexity Low_complexity 1 45 0 270 344 32 5 chr10 45100474 45100695 -95216070 + L1ME LINE L1 5510 5736 -385 995 158 0 13 chr10 45101289 45101441 -95215324 - AluSq/x SINE Alu -162 150 1 267 299 149 8 chr10 45102254 45102388 -95214377 + L2 LINE L2 2946 3098 -215 325 312 74 26 chr10 45102813 45103002 -95213763 - MIR SINE MIR -56 206 9 203 347 96 41 chr10 45104527 45104893 -95211872 - L2 LINE L2 -339 2975 2590 2441 97 0 0 chr10 45105320 45105630 -95211135 + AluSg SINE Alu 1 310 0 2027 47 0 0 chr10 45106519 45106754 -95210011 - AluY SINE Alu 0 311 77 25 65 0 0 chr10 45106812 45106858 -95209907 + AT_rich Low_complexity Low_complexity 1 46 0 636 261 50 0 chr10 45107122 45107321 -95209444 - L1MA4 LINE L1 -4 6296 6088 33 25 0 0 chr10 45107407 45107447 -95209318 + AT_rich Low_complexity Low_complexity 1 40 0 2281 89 6 32 chr10 45108503 45108818 -95207947 + AluSc SINE Alu 1 307 -2 35 0 0 0 chr10 45108829 45108864 -95207901 + AT_rich Low_complexity Low_complexity 1 35 0 2153 98 17 0 chr10 45109557 45109684 -95207081 + AluY SINE Alu 1 124 -187 248 0 0 30 chr10 45109684 45109717 -95207048 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2153 98 17 0 chr10 45109717 45109876 -95206889 + AluY SINE Alu 124 292 -19 221 171 0 0 chr10 45110028 45110069 -95206696 + A-rich Low_complexity Low_complexity 1 41 0 507 347 25 17 chr10 45113267 45113506 -95203259 + MIR SINE MIR 16 256 -6 25 75 0 0 chr10 45113591 45113644 -95203121 + AT_rich Low_complexity Low_complexity 1 53 0 549 218 0 27 chr10 45113665 45113775 -95202990 + FLAM_A SINE Alu 4 110 -32 3848 207 59 9 chr10 45114229 45115042 -95201723 - MER21B LTR ERV1 -5 858 5 3029 188 67 17 chr10 45115044 45115702 -95201063 + MER44D DNA MER2_type 15 705 0 473 330 94 26 chr10 45116098 45116440 -95200325 + L2 LINE L2 2026 2390 -924 730 268 6 0 chr10 45116980 45117144 -95199621 + MER58A DNA MER1_type 2 166 0 2405 70 0 3 chr10 45117151 45117450 -95199315 - AluSg SINE Alu -4 306 9 2384 156 11 29 chr10 45117510 45117952 -95198813 + Tigger2a DNA MER2_type 1 434 0 321 119 71 18 chr10 45117978 45118146 -95198619 + (TG)n Simple_repeat Simple_repeat 1 177 0 207 0 0 0 chr10 45118415 45118438 -95198327 + (GGGAGA)n Simple_repeat Simple_repeat 6 28 0 187 375 8 8 chr10 45118464 45118584 -95198181 + L3 LINE CR1 1457 1576 -1 2302 101 3 25 chr10 45120391 45120707 -95196058 + AluSg SINE Alu 1 309 -1 2375 190 31 45 chr10 45122271 45122825 -95193940 + L1MDa LINE L1 900 1445 -5095 2081 152 0 7 chr10 45122825 45123135 -95193630 + AluSx SINE Alu 1 308 -4 2375 190 31 45 chr10 45123135 45123221 -95193544 + L1MDa LINE L1 1445 1531 -5009 1035 223 33 104 chr10 45123274 45123813 -95192952 + L1MDa LINE L1 2852 3352 -3188 311 125 0 0 chr10 45123882 45123930 -95192835 - L1M1 LINE L1 -6636 929 882 436 213 139 0 chr10 45123933 45124041 -95192724 - L1M1 LINE L1 -7223 342 220 * 2903 204 41 13 chr10 45124012 45124648 -95192117 - L1M1 LINE L1 -6900 665 12 * 3523 243 67 12 chr10 45124645 45125542 -95191223 - L1M4 LINE L1 -1653 4493 3494 2125 121 31 0 chr10 45125542 45125831 -95190934 - AluSc SINE Alu -11 298 1 3523 243 67 12 chr10 45125831 45126290 -95190475 - L1M4 LINE L1 -2652 3494 3062 1866 109 44 25 chr10 45126295 45126661 -95190104 + L1M1 LINE L1 3238 3610 -3955 3143 97 0 0 chr10 45126666 45127098 -95189667 + L1P LINE L1 9 440 -5706 829 138 38 69 chr10 45127104 45127264 -95189501 + AluSg/x SINE Alu 139 293 -17 827 93 0 8 chr10 45127673 45127842 -95188923 + AluSp/q SINE Alu 197 364 0 1919 55 4 16 chr10 45127850 45128107 -95188658 + AluY SINE Alu 56 309 -2 551 287 201 34 chr10 45128185 45128968 -95187797 - L2 LINE L2 -9 3304 2369 552 239 56 35 chr10 45128997 45129139 -95187626 - L2 LINE L2 -1 3312 3168 1207 146 58 39 chr10 45129142 45129348 -95187417 + AluJo SINE Alu 87 296 -16 223 210 37 25 chr10 45129350 45129431 -95187334 - L2 LINE L2 -151 3162 3081 1123 167 16 5 chr10 45129467 45129653 -95187112 - AluSg/x SINE Alu -13 299 112 950 266 136 23 chr10 45129654 45130094 -95186671 - L2 LINE L2 -302 3011 2541 187 335 94 47 chr10 45131248 45131418 -95185347 - MER5A DNA MER1_type -5 184 7 2024 115 14 4 chr10 45131558 45131872 -95184893 + AluSx SINE Alu 1 317 0 2087 80 90 14 chr10 45131875 45132163 -95184602 + AluY SINE Alu 1 310 -1 214 303 169 26 chr10 45132169 45132364 -95184401 - L2 LINE L2 -957 2357 2135 403 195 0 0 chr10 45134916 45135003 -95181762 - L1MB8 LINE L1 -9 6169 6083 250 301 43 11 chr10 45135418 45135511 -95181254 + MIR3 SINE MIR 83 178 -30 440 324 51 34 chr10 45135948 45136124 -95180641 - L2 LINE L2 -99 3173 2995 2185 117 3 0 chr10 45139653 45139953 -95176812 - AluSx SINE Alu -11 301 1 200 298 53 75 chr10 45140438 45140532 -95176233 - MIR3 SINE MIR -1 207 117 1820 167 25 0 chr10 45140532 45140814 -95175951 + AluSx SINE Alu 1 289 -23 200 298 53 75 chr10 45140814 45140907 -95175858 - MIR3 SINE MIR -91 117 24 199 70 23 23 chr10 45141277 45141320 -95175445 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2411 80 0 0 chr10 45141925 45142224 -95174541 - AluSq SINE Alu -14 299 1 393 328 29 18 chr10 45142358 45142529 -95174236 + MER5B DNA MER1_type 2 174 -4 2095 106 4 0 chr10 45142771 45143045 -95173720 + AluSx SINE Alu 14 288 -24 28 0 0 0 chr10 45143174 45143202 -95173563 + AT_rich Low_complexity Low_complexity 1 28 0 390 313 40 5 chr10 45143323 45143547 -95173218 - L1ME4a LINE L1 -219 5902 5671 314 235 37 81 chr10 45143780 45143916 -95172849 - MIR SINE MIR -39 223 94 242 154 15 77 chr10 45144230 45144295 -95172470 + (CATA)n Simple_repeat Simple_repeat 2 62 0 195 139 0 0 chr10 45144345 45144381 -95172384 + (TATG)n Simple_repeat Simple_repeat 3 38 0 423 314 0 25 chr10 45144832 45144953 -95171812 + L2 LINE L2 3195 3312 -1 764 184 0 38 chr10 45145221 45145406 -95171359 - L1MB8 LINE L1 -21 6157 5980 843 185 92 0 chr10 45145667 45145840 -95170925 - MER5A DNA MER1_type 0 189 1 3012 232 74 39 chr10 45147411 45148040 -95168725 + L1MDa LINE L1 1118 1724 -4816 1771 146 23 0 chr10 45148040 45148341 -95168424 - L1PA16 LINE L1 0 6166 5859 3012 232 74 39 chr10 45148341 45148416 -95168349 + L1MDa LINE L1 1724 1795 -4745 1595 171 0 93 chr10 45148416 45148760 -95168005 + AluJb SINE Alu 1 312 0 3012 232 74 39 chr10 45148760 45148787 -95167978 + L1MDa LINE L1 1795 1820 -4720 2248 102 0 16 chr10 45148787 45149090 -95167675 - AluY SINE Alu -13 298 1 3012 232 74 39 chr10 45149090 45149780 -95166985 + L1MDa LINE L1 1820 2590 -3950 1122 190 24 16 chr10 45149778 45150025 -95166740 + L1MB1 LINE L1 5897 6145 -23 * 1246 253 21 38 chr10 45150075 45150585 -95166180 + L1MDa LINE L1 2570 3072 -3468 2653 74 117 5 chr10 45150585 45150988 -95165777 + LTR7 LTR ERV1 1 448 -2 1246 253 21 38 chr10 45150988 45151034 -95165731 + L1MDa LINE L1 3072 3117 -3423 692 221 42 75 chr10 45151031 45151339 -95165426 + L1MDa LINE L1 1001 1298 -5242 * 1720 179 87 0 chr10 45151359 45151738 -95165027 + L1MC3 LINE L1 6166 6577 -1208 1254 250 68 71 chr10 45151744 45152348 -95164417 + LTR9B LTR ERV1 7 608 -36 608 161 60 7 chr10 45152352 45152501 -95164264 + L1MC3 LINE L1 7622 7778 -7 2779 263 58 5 chr10 45152501 45153661 -95163104 + L1MDa LINE L1 3890 5110 -1430 213 65 0 0 chr10 45155230 45155261 -95161504 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5822 158 9 38 chr10 45155869 45158014 -95158751 - L1PB1 LINE L1 -9 6858 4789 1089 124 17 0 chr10 45158013 45158191 -95158574 - L1PB1 LINE L1 -6681 182 2 * 5161 96 32 1 chr10 45158570 45159342 -95157423 - L1PA12 LINE L1 -1 6167 5372 253 182 15 15 chr10 45160958 45161024 -95155741 + GA-rich Low_complexity Low_complexity 4 69 0 2466 198 80 32 chr10 45161966 45162532 -95154233 - MLT1E LTR MaLR 0 593 1 1695 217 3 0 chr10 45162775 45163074 -95153691 + AluJo SINE Alu 1 300 -12 2734 39 0 0 chr10 45163431 45163740 -95153025 + AluYa5 SINE Alu 1 309 -2 1418 90 0 0 chr10 45163744 45163921 -95152844 + AluY SINE Alu 127 303 -8 6528 83 150 2 chr10 45164055 45165118 -95151647 + MER11B LTR ERVK 3 1222 -14 1059 202 72 14 chr10 45165652 45165687 -95151078 + AluJb SINE Alu 85 117 -195 183 42 0 0 chr10 45165687 45165711 -95151054 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1059 202 72 14 chr10 45165711 45165883 -95150882 + AluJb SINE Alu 117 304 -8 26 0 0 0 chr10 45165917 45165943 -95150822 + AT_rich Low_complexity Low_complexity 1 26 0 897 280 62 33 chr10 45165943 45166851 -95149914 + L1ME LINE L1 688 1568 -4512 35 78 0 0 chr10 45167099 45167176 -95149589 + AT_rich Low_complexity Low_complexity 1 77 0 2046 152 0 0 chr10 45167455 45167752 -95149013 + AluSx SINE Alu 1 297 -15 1702 167 14 17 chr10 45167910 45168198 -95148567 + AluJo SINE Alu 1 287 -25 635 260 159 0 chr10 45168406 45168614 -95148151 + MIR SINE MIR 21 261 -1 5946 165 6 30 chr10 45168926 45170069 -95146696 - MSTB-int LTR MaLR -535 1116 1 2693 138 12 14 chr10 45170069 45170496 -95146269 - MSTB LTR MaLR 0 426 1 980 107 0 7 chr10 45170928 45171068 -95145697 + AluSg/x SINE Alu 167 305 -7 610 289 117 20 chr10 45171100 45171398 -95145367 + L3 LINE CR1 686 1012 -565 25 31 0 0 chr10 45171483 45171515 -95145250 + AT_rich Low_complexity Low_complexity 1 32 0 320 273 57 0 chr10 45171763 45171851 -95144914 - L2 LINE L2 0 3272 3180 842 197 212 7 chr10 45172078 45172352 -95144413 + MER21B LTR ERV1 523 852 -11 734 217 79 25 chr10 45172946 45173186 -95143579 + MLT1B LTR MaLR 127 379 -11 6244 106 72 19 chr10 45173313 45174345 -95142420 - THE1B-int LTR MaLR -494 1086 1 2059 133 64 9 chr10 45174345 45174690 -95142075 - THE1B LTR MaLR 0 364 1 234 185 46 15 chr10 45174961 45175026 -95141739 + MLT1B LTR MaLR 398 464 -3 2063 126 3 24 chr10 45175733 45176067 -95140698 - MER4D LTR ERV1 0 872 546 1377 111 22 4 chr10 45176086 45176311 -95140454 + MER41B LTR ERV1 1 229 -406 3443 122 0 2 chr10 45176411 45176937 -95139828 + HERVK3 LTR ERVK 6717 7241 -2 2991 103 0 31 chr10 45176939 45177385 -95139380 + LTR3 LTR ERVK 1 432 0 1071 148 129 23 chr10 45177385 45177602 -95139163 - LTR19A-int LTR ERV1 -5346 240 1 3194 72 97 0 chr10 45177602 45178045 -95138720 - LTR19A LTR ERV1 0 486 1 448 227 0 0 chr10 45178082 45178179 -95138586 + PABL_A LTR ERV1 68 164 -496 26316 124 24 67 chr10 45178678 45183792 -95132973 + L1PA8 LINE L1 4 4773 -1399 2123 145 0 3 chr10 45183792 45184103 -95132662 + AluSg SINE Alu 1 310 0 26316 124 24 67 chr10 45184103 45185442 -95131323 + L1PA8 LINE L1 4773 6168 -4 761 279 140 60 chr10 45187554 45188290 -95128475 + LTR50 LTR ERVL 1 795 0 4476 94 0 0 chr10 45188741 45189295 -95127470 + MER41A LTR ERV1 1 554 0 1069 253 4 13 chr10 45190453 45190624 -95126141 + MER58A DNA MER1_type 2 172 -2248 2218 121 0 0 chr10 45190624 45190929 -95125836 - AluSg SINE Alu -4 306 2 1069 253 4 13 chr10 45190929 45190982 -95125783 + MER58A DNA MER1_type 172 224 0 435 312 101 13 chr10 45191151 45191388 -95125377 + MLT1L LTR MaLR 113 370 -245 1718 143 44 17 chr10 45191415 45191709 -95125056 + AluSg SINE Alu 1 302 -8 1692 150 66 4 chr10 45192523 45192797 -95123968 - AluSx SINE Alu -19 293 3 222 326 58 42 chr10 45193061 45193461 -95123304 - L2 LINE L2 -387 2927 2441 656 212 0 0 chr10 45193649 45193762 -95123003 - AluJb SINE Alu -14 298 186 442 216 0 0 chr10 45193805 45193893 -95122872 + AluJ/FLAM SINE Alu 12 99 -213 2957 143 2 0 chr10 45193912 45194346 -95122419 - MER1A DNA MER1_type -36 493 59 272 234 78 0 chr10 45194655 45194732 -95122033 - LTR41 LTR ERVL -5 768 686 1894 89 0 4 chr10 45194894 45195131 -95121634 + AluSq SINE Alu 1 236 -77 1349 174 67 7 chr10 45196704 45196999 -95119766 + AluJb SINE Alu 1 311 0 1515 212 137 26 chr10 45198448 45198871 -95117894 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 45198871 45199182 -95117583 + AluY SINE Alu 12 322 0 1515 212 137 26 chr10 45199182 45199210 -95117555 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 45199260 45199531 -95117234 + LTR46-int LTR ERV1 675 944 -4642 764 310 30 50 chr10 45199557 45200174 -95116591 + LTR46-int LTR ERV1 4242 5371 -2157 2030 125 4 0 chr10 45202154 45202481 -95114284 - AluSq SINE Alu 0 329 2 24 32 0 0 chr10 45202877 45202908 -95113857 + AT_rich Low_complexity Low_complexity 1 31 0 454 314 57 0 chr10 45203027 45203186 -95113579 - MIR SINE MIR -70 192 25 762 167 23 0 chr10 45203778 45203952 -95112813 + CT-rich Low_complexity Low_complexity 3 180 0 565 290 51 23 chr10 45204231 45204445 -95112320 + HAL1 LINE L1 771 990 -1517 27 0 0 0 chr10 45204459 45204486 -95112279 + AT_rich Low_complexity Low_complexity 1 27 0 1453 277 105 29 chr10 45204494 45205255 -95111510 + HAL1 LINE L1 1619 2437 -70 231 257 0 0 chr10 45205476 45205550 -95111215 + L1ME4a LINE L1 6045 6118 -3 1302 268 114 44 chr10 45206009 45206896 -95109869 - L2 LINE L2 0 3313 2367 2481 85 0 0 chr10 45207983 45208288 -95108477 + AluSg SINE Alu 1 305 -5 344 179 0 0 chr10 45208300 45208356 -95108409 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 45208601 45208718 -95108047 + L2 LINE L2 3158 3272 0 531 46 35 11 chr10 45209735 45209822 -95106943 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 45210684 45211021 -95105744 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 45211124 45211145 -95105620 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 45211200 45211221 -95105544 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 45211316 45211862 -95104903 - L1P LINE L1 -1101 5045 4500 1254 91 6 0 chr10 45211864 45212029 -95104736 + L1PA13 LINE L1 5993 6158 -5 180 305 49 67 chr10 45214245 45214468 -95102297 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 45214848 45214885 -95101880 + (TC)n Simple_repeat Simple_repeat 2 38 0 398 306 93 78 chr10 45214973 45215502 -95101263 + L2 LINE L2 1947 2483 -831 * 706 265 55 0 chr10 45215482 45215682 -95101083 + L2 LINE L2 3103 3313 0 256 346 111 56 chr10 45215689 45216102 -95100663 + L2 LINE L2 2442 2877 -437 195 299 13 123 chr10 45216204 45216297 -95100468 + L2 LINE L2 3029 3100 -172 1871 181 0 7 chr10 45216297 45216606 -95100159 - AluJb SINE Alu -5 307 1 195 299 13 123 chr10 45216606 45216666 -95100099 + L2 LINE L2 3100 3165 -107 2007 152 0 0 chr10 45217244 45217540 -95099225 + AluSx SINE Alu 1 296 -16 22 0 0 0 chr10 45217959 45217981 -95098784 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 45218115 45218139 -95098626 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 45218468 45218608 -95098157 + MIR SINE MIR 69 219 -43 1049 293 129 37 chr10 45219406 45220299 -95096466 - L2 LINE L2 -12 3301 2338 1054 182 2 2 chr10 45220300 45220316 -95096449 - L1PB3 LINE L1 0 6151 6136 393 22 0 0 chr10 45220316 45220362 -95096403 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1054 182 2 2 chr10 45220362 45220534 -95096231 - L1PB3 LINE L1 -14 6137 5964 367 211 28 0 chr10 45220575 45220684 -95096081 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 45220871 45220953 -95095812 - MIR SINE MIR -171 91 9 215 211 0 0 chr10 45221633 45221671 -95095094 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 45222095 45222227 -95094538 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 45222328 45222423 -95094342 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 45223112 45223357 -95093408 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 45223584 45223837 -95092928 - AluSx SINE Alu -13 299 44 1907 159 30 0 chr10 45224935 45225230 -95091535 - AluJb SINE Alu -8 304 1 205 214 36 0 chr10 45225362 45225418 -95091347 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 836 204 34 17 chr10 45228499 45228675 -95088090 + MER5A DNA MER1_type 11 189 0 807 226 28 42 chr10 45228683 45228895 -95087870 + MER3 DNA MER1_type 1 209 0 424 180 126 45 chr10 45229876 45229987 -95086778 - MIR3 SINE MIR -6 202 83 2179 128 0 0 chr10 45231110 45231407 -95085358 - AluSq SINE Alu -16 297 1 312 120 0 0 chr10 45232477 45232527 -95084238 + (TG)n Simple_repeat Simple_repeat 1 50 0 265 266 40 87 chr10 45233819 45233992 -95082773 - MIR SINE MIR -72 190 26 2239 144 123 5 chr10 45234002 45234385 -95082380 + MSTA LTR MaLR 1 428 0 2205 120 0 13 chr10 45234576 45234884 -95081881 - AluSc SINE Alu -5 304 1 301 252 208 38 chr10 45235029 45235188 -95081577 - L2 LINE L2 -5 3308 3123 1761 169 0 17 chr10 45235218 45235508 -95081257 + AluSx SINE Alu 3 287 -25 2227 122 3 0 chr10 45235911 45236223 -95080542 - AluSq SINE Alu 0 313 1 1271 99 6 0 chr10 45237068 45237240 -95079525 + L1PA6 LINE L1 5982 6154 0 261 256 130 52 chr10 45239236 45239669 -95077096 + L1ME4a LINE L1 5310 5863 -258 1710 124 12 16 chr10 45239669 45239926 -95076839 + AluSx SINE Alu 35 290 -22 261 256 130 52 chr10 45239926 45240004 -95076761 + L1ME4a LINE L1 5863 5933 -188 24 0 0 0 chr10 45240049 45240073 -95076692 + AT_rich Low_complexity Low_complexity 1 24 0 2554 40 3 0 chr10 45240859 45241155 -95075610 + AluY SINE Alu 1 297 -14 285 266 69 68 chr10 45242896 45243055 -95073710 - MIR3 SINE MIR -20 188 23 262 269 77 58 chr10 45244202 45244306 -95072459 + MIR SINE MIR 20 125 -137 387 316 33 20 chr10 45244533 45244685 -95072080 + MIR SINE MIR 49 202 -60 481 269 26 64 chr10 45245185 45245341 -95071424 - MLT1J1 LTR MaLR -296 150 1 2019 245 84 28 chr10 45246224 45246331 -95070434 + L1MEc LINE L1 816 916 -5480 1255 154 30 0 chr10 45246331 45246532 -95070233 + L1PA14 LINE L1 5955 6161 0 2019 245 84 28 chr10 45246532 45247280 -95069485 + L1MEc LINE L1 916 1719 -4677 8393 219 68 77 chr10 45247284 45249001 -95067764 + L1P5 LINE L1 1407 3139 -3251 767 171 0 50 chr10 45249001 45249141 -95067624 + FLAM_C SINE Alu 1 133 0 8393 219 68 77 chr10 45249141 45249854 -95066911 + L1P5 LINE L1 3139 3857 -2533 953 190 0 0 chr10 45249854 45250012 -95066753 + AluSg/x SINE Alu 135 292 -18 8393 219 68 77 chr10 45250012 45251741 -95065024 + L1P5 LINE L1 3857 5766 -624 180 97 0 0 chr10 45251805 45251836 -95064929 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 203 156 0 22 chr10 45251849 45251878 -95064887 + T-rich Low_complexity Low_complexity 4 33 -14 2158 158 11 11 chr10 45251878 45252233 -95064532 - L1PA16 LINE L1 0 6166 5812 203 156 0 22 chr10 45252233 45252248 -95064517 + T-rich Low_complexity Low_complexity 33 47 0 8118 29 1 0 chr10 45252249 45253821 -95062944 - L1PA4 LINE L1 -1 6154 4582 6355 180 10 11 chr10 45253821 45254216 -95062549 - L1PA16 LINE L1 -337 5829 5435 1856 146 29 0 chr10 45254216 45254497 -95062268 - AluSx SINE Alu -13 299 11 6355 180 10 11 chr10 45254497 45255909 -95060856 - L1PA16 LINE L1 -731 5435 4028 21 36 0 0 chr10 45256129 45256157 -95060608 + AT_rich Low_complexity Low_complexity 1 28 0 7259 241 66 21 chr10 45256171 45256417 -95060348 + L1M4c LINE L1 2079 2312 -4070 2333 86 0 7 chr10 45256417 45256718 -95060047 + AluY SINE Alu 3 301 -10 7259 241 66 21 chr10 45256718 45258872 -95057893 + L1M4c LINE L1 2312 4585 -1797 398 212 93 53 chr10 45258999 45259066 -95057699 + HAL1b LINE L1 617 680 -668 2261 107 0 0 chr10 45259066 45259356 -95057409 + AluSc SINE Alu 1 290 -19 398 212 93 53 chr10 45259356 45259439 -95057326 + HAL1b LINE L1 680 773 -575 227 208 83 67 chr10 45259564 45259684 -95057081 - L1MC/D LINE L1 -2348 5460 5339 1668 143 65 19 chr10 45259929 45260236 -95056529 + L1MB3 LINE L1 5574 5894 -289 6472 150 34 24 chr10 45260240 45261391 -95055374 + MER109 Unknown Unknown 479 1640 -792 1636 97 5 5 chr10 45261419 45261636 -95055129 - L1PA7 LINE L1 0 6154 5938 24983 105 78 141 chr10 45261760 45264645 -95052120 - L1PA7 LINE L1 -561 5593 2529 6046 33 1 8 chr10 45264645 45265526 -95051239 - SVA Other Other -1186 1386 1 24983 105 78 141 chr10 45265526 45266386 -95050379 - L1PA7 LINE L1 -3625 2529 1617 299 25 25 0 chr10 45266386 45266426 -95050339 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 24983 105 78 141 chr10 45266426 45268655 -95048110 - L1PA7 LINE L1 -4537 1617 2 2716 198 148 24 chr10 45268656 45269370 -95047395 + MER109 Unknown Unknown 1625 2427 -5 227 121 0 0 chr10 45269379 45269445 -95047320 - Alu SINE Alu 0 316 251 2069 110 11 0 chr10 45269445 45269718 -95047047 - AluSx SINE Alu -35 277 2 418 192 10 10 chr10 45269733 45269832 -95046933 - L1MA4 LINE L1 -250 6050 5952 3220 172 16 18 chr10 45269834 45270445 -95046320 + L1MD1 LINE L1 5359 5968 -274 349 276 17 9 chr10 45270609 45270725 -95046040 + HAL1b LINE L1 428 544 -804 3374 86 2 9 chr10 45271093 45271533 -95045232 + MLT2A1 LTR ERVL 1 437 -7 32734 85 17 13 chr10 45271536 45272835 -95043930 + HERVL-A1 LTR ERVL 1 1294 -4360 196 200 113 113 chr10 45272835 45272950 -95043815 + MER5B DNA MER1_type 62 176 -2 32734 85 17 13 chr10 45272950 45276043 -95040722 + HERVL-A1 LTR ERVL 1294 4523 -1131 36990 62 2 0 chr10 45276051 45280692 -95036073 + L1P LINE L1 7 4656 -1490 507 33 0 0 chr10 45280692 45280753 -95036012 + (TCTCCC)n Simple_repeat Simple_repeat 1 61 0 5723 126 31 26 chr10 45281007 45283304 -95033461 + SVA Other Other 435 1384 -2 8019 33 0 0 chr10 45283317 45284857 -95031908 + L1PA4 LINE L1 4643 6152 -3 567 320 6 6 chr10 45285668 45285824 -95030941 + MIR SINE MIR 17 172 -90 360 240 50 30 chr10 45286044 45286144 -95030621 + MIR SINE MIR 123 224 -38 2329 90 3 0 chr10 45286161 45286472 -95030293 + AluSq SINE Alu 1 312 -1 1230 99 6 0 chr10 45286472 45286501 -95030264 + AluSx SINE Alu 1 28 -582 1323 38 0 27 chr10 45286501 45286686 -95030079 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1230 99 6 0 chr10 45286686 45286770 -95029995 + AluSx SINE Alu 28 610 0 195 284 47 55 chr10 45286814 45286941 -95029824 - L2 LINE L2 -62 3251 3126 2623 126 63 0 chr10 45287534 45287964 -95028801 + L1MA4A LINE L1 5841 6297 -6 353 300 82 86 chr10 45288714 45288994 -95027771 - L2 LINE L2 -60 3212 2934 870 227 0 0 chr10 45289070 45289242 -95027523 + MLT2C1 LTR ERVL 1 172 -225 5784 225 48 51 chr10 45289490 45291167 -95025598 + L1M4b LINE L1 10 1680 -5179 4326 184 26 15 chr10 45291192 45292848 -95023917 + L1MA9 LINE L1 2907 4581 -2984 21710 123 12 18 chr10 45292856 45296259 -95020506 + L1P LINE L1 11 3393 -2753 42480 48 25 1 chr10 45296259 45302273 -95014492 + L1PA6 LINE L1 1 6154 0 6080 182 27 10 chr10 45302694 45303938 -95012827 + L1MA9 LINE L1 4563 5828 -1737 5300 166 18 33 chr10 45303948 45305121 -95011644 + L1MA9 LINE L1 6318 7460 -271 1488 180 48 20 chr10 45305121 45305415 -95011350 + AluJb SINE Alu 1 302 -10 5300 166 18 33 chr10 45305415 45305662 -95011103 + L1MA9 LINE L1 7460 7709 -22 4476 208 50 84 chr10 45305741 45306267 -95010498 + L1M4 LINE L1 3943 4485 -1661 602 173 0 27 chr10 45306267 45306377 -95010388 + AluSg/x SINE Alu 193 299 -13 4476 208 50 84 chr10 45306377 45307248 -95009517 + L1M4 LINE L1 4485 5398 -748 342 0 0 0 chr10 45308198 45308236 -95008529 + (CGGGGG)n Simple_repeat Simple_repeat 6 43 0 22 56 0 0 chr10 45308601 45308637 -95008128 + GC_rich Low_complexity Low_complexity 1 36 0 248 246 209 0 chr10 45309015 45309125 -95007640 + MIR SINE MIR 21 153 -55 257 245 0 0 chr10 45309457 45309510 -95007255 + L2 LINE L2 3210 3262 -10 201 333 0 41 chr10 45311577 45311724 -95005041 + C-rich Low_complexity Low_complexity 3 143 0 217 202 96 85 chr10 45312425 45312519 -95004246 + MIR SINE MIR 56 150 -112 304 300 150 7 chr10 45313826 45313966 -95002799 - MIR SINE MIR -71 191 32 2121 118 0 0 chr10 45314758 45315054 -95001711 + AluSx SINE Alu 1 296 -16 240 285 73 41 chr10 45315841 45315964 -95000801 + L2 LINE L2 3146 3272 0 2547 184 54 6 chr10 45316011 45316528 -95000237 - MER34 LTR ERV1 0 542 1 231 269 0 0 chr10 45317719 45317771 -94998994 - MIR SINE MIR -98 164 113 263 164 209 0 chr10 45318093 45318160 -94998605 - LTR33 LTR ERVL -14 507 427 1126 229 156 63 chr10 45318451 45318932 -94997833 - MLT1H1 LTR MaLR -1 554 21 1821 132 0 14 chr10 45318932 45319245 -94997520 - AluSx SINE Alu 0 309 1 1126 229 156 63 chr10 45319245 45319269 -94997496 - MLT1H1 LTR MaLR -534 21 1 186 284 95 14 chr10 45319964 45320038 -94996727 + MER5C DNA MER1_type 9 88 -236 1443 169 0 40 chr10 45320039 45320162 -94996603 + AluJo SINE Alu 21 147 -174 1975 87 0 0 chr10 45320162 45320415 -94996350 + AluY SINE Alu 45 297 -14 1443 169 0 40 chr10 45320415 45320603 -94996162 + AluJo SINE Alu 147 321 0 814 188 79 22 chr10 45320603 45320832 -94995933 + MER5C DNA MER1_type 79 320 -4 411 294 144 0 chr10 45321133 45321327 -94995438 - MIR SINE MIR -12 250 29 24389 79 37 2 chr10 45321924 45325192 -94991573 + L1P LINE L1 11 3393 -2753 36378 47 31 2 chr10 45325192 45329715 -94987050 + L1P LINE L1 1 4656 -1490 543 31 0 0 chr10 45329715 45329780 -94986985 + (TCTCCC)n Simple_repeat Simple_repeat 3 67 0 1361 124 64 33 chr10 45329784 45330114 -94986651 + SVA Other Other 53 392 -994 3389 146 41 4 chr10 45330277 45330997 -94985768 - L1PA7 LINE L1 -63 6091 5304 742 234 116 37 chr10 45331934 45332366 -94984399 + L1MB7 LINE L1 2760 3225 -2921 888 245 121 36 chr10 45332377 45332798 -94983967 + L1MB7 LINE L1 3270 3726 -2420 200 289 58 0 chr10 45333450 45333502 -94983263 - L2 LINE L2 -14 3258 3204 316 239 34 11 chr10 45334269 45334445 -94982320 + CT-rich Low_complexity Low_complexity 1 180 0 8124 52 0 181 chr10 45335105 45336645 -94980120 + SVA Other Other 126 1386 0 17428 42 1 1 chr10 45336648 45339539 -94977226 + L1PA5 LINE L1 3264 6154 0 328 185 192 108 chr10 45339547 45339677 -94977088 + MIR SINE MIR 71 211 -51 8004 205 39 21 chr10 45340345 45341021 -94975744 + L1MB8 LINE L1 3325 3988 -2158 2052 103 7 10 chr10 45341021 45341321 -94975444 + AluSc SINE Alu 1 299 -10 8004 205 39 21 chr10 45341321 45342643 -94974122 + L1MB8 LINE L1 3988 5357 -789 3763 176 44 13 chr10 45342645 45343399 -94973366 + L1MB8 LINE L1 5402 6178 0 4097 194 20 20 chr10 45343403 45344239 -94972526 + L1MB7 LINE L1 4980 5824 -360 2217 105 3 0 chr10 45344239 45344545 -94972220 + AluSx SINE Alu 2 308 -4 4097 194 20 20 chr10 45344545 45344897 -94971868 + L1MB7 LINE L1 5823 6174 -10 811 296 68 24 chr10 45345411 45345762 -94971003 - L1ME4a LINE L1 -197 5924 5549 2236 34 0 4 chr10 45345762 45346027 -94970738 + AluY SINE Alu 38 301 -10 811 296 68 24 chr10 45346027 45346101 -94970664 - L1ME4a LINE L1 -572 5549 5480 370 333 59 12 chr10 45346425 45346680 -94970085 + L1ME3 LINE L1 4950 5216 -930 876 286 131 25 chr10 45346744 45347265 -94969500 + L1ME3 LINE L1 5314 5889 -273 545 344 64 0 chr10 45348522 45348897 -94967868 - L1ME3A LINE L1 -335 5835 5437 398 260 50 112 chr10 45348899 45349239 -94967526 - L1MC4a LINE L1 -333 5788 5508 980 144 0 12 chr10 45349660 45349820 -94966945 - FRAM SINE Alu -15 161 4 780 241 95 13 chr10 45349955 45350187 -94966578 + MIR SINE MIR 4 254 -8 246 317 17 17 chr10 45350388 45350508 -94966257 - L1MC4a LINE L1 -1585 4561 4442 325 315 104 52 chr10 45350513 45350840 -94965925 - L1MC4a LINE L1 -1726 4420 4077 183 263 0 0 chr10 45351176 45351256 -94965509 + CT-rich Low_complexity Low_complexity 1 80 0 688 141 190 69 chr10 45351359 45351613 -94965152 - MER4C LTR ERV1 -19 446 153 1353 138 157 48 chr10 45351618 45351930 -94964835 - MER4A LTR ERV1 -318 346 1 312 290 56 37 chr10 45351947 45352054 -94964711 - HAL1 LINE L1 -1185 1322 1214 3284 132 8 64 chr10 45352103 45352709 -94964056 - MER4B LTR ERV1 -36 574 3 287 149 0 0 chr10 45352795 45352842 -94963923 + L2 LINE L2 3262 3308 -5 2119 171 12 57 chr10 45352860 45353282 -94963483 + MER57A LTR ERV1 1 403 0 873 104 0 0 chr10 45353414 45353558 -94963207 + (TC)n Simple_repeat Simple_repeat 1 144 0 4249 132 13 2 chr10 45354721 45355349 -94961416 - MER41B LTR ERV1 0 635 1 482 195 18 35 chr10 45356653 45356766 -94959999 - MIR SINE MIR -87 175 65 207 298 0 0 chr10 45356851 45356898 -94959867 + MER5A DNA MER1_type 55 101 -88 14345 49 11 0 chr10 45356961 45359514 -94957251 + L1PA5 LINE L1 3588 6153 -1 2235 130 90 3 chr10 45359514 45359882 -94956883 - MER4C LTR ERV1 -65 400 1 244 297 148 0 chr10 45359884 45360012 -94956753 + MER5B DNA MER1_type 28 174 -4 21 0 0 0 chr10 45360029 45360050 -94956715 + AT_rich Low_complexity Low_complexity 1 21 0 540 272 19 43 chr10 45360091 45360253 -94956512 - MIR SINE MIR -74 188 31 303 202 28 0 chr10 45360594 45360703 -94956062 + (TGGA)n Simple_repeat Simple_repeat 3 114 0 806 126 24 0 chr10 45360717 45360884 -94955881 + (TGGA)n Simple_repeat Simple_repeat 2 172 0 190 272 25 62 chr10 45360951 45361032 -94955733 + L2 LINE L2 3190 3267 -5 230 229 57 29 chr10 45361258 45361328 -94955437 + MER5B DNA MER1_type 107 178 0 222 293 0 0 chr10 45362225 45362283 -94954482 + MIR SINE MIR 88 145 -63 669 149 64 21 chr10 45363525 45363666 -94953099 + AluJb SINE Alu 140 286 -26 360 265 0 0 chr10 45364392 45364475 -94952290 - MER5A DNA MER1_type 0 189 107 1593 199 24 58 chr10 45366678 45367060 -94949705 - MLT1A2 LTR MaLR -5 369 1 217 204 176 35 chr10 45367062 45367204 -94949561 - L2 LINE L2 -291 2981 2820 184 188 42 42 chr10 45370128 45370176 -94946589 - L3b LINE CR1 0 1583 1536 187 196 278 41 chr10 45370458 45370555 -94946210 - L3 LINE CR1 -719 858 739 678 251 132 61 chr10 45370559 45370937 -94945828 - MLT1K LTR MaLR -11 577 173 189 191 250 15 chr10 45370987 45371055 -94945710 - MIR3 SINE MIR -7 201 118 764 282 44 32 chr10 45373434 45373750 -94943015 + MER46C DNA MER2_type 4 323 -15 393 243 178 40 chr10 45373752 45373904 -94942861 - MIR SINE MIR -62 200 28 400 239 44 35 chr10 45374111 45374224 -94942541 + MIR SINE MIR 33 146 -116 425 263 130 68 chr10 45374230 45374407 -94942358 + L1ME4a LINE L1 3154 3355 -2791 968 141 86 18 chr10 45374407 45374570 -94942195 + FAM SINE Alu 1 174 -1 425 263 130 68 chr10 45374570 45374691 -94942074 + L1ME4a LINE L1 3355 3467 -2679 230 341 65 29 chr10 45374785 45375031 -94941734 + L1ME4a LINE L1 3625 3879 -2267 279 272 123 55 chr10 45375131 45375440 -94941325 + L1ME4a LINE L1 4021 4350 -1796 2140 85 0 4 chr10 45375472 45375795 -94940970 - AluSg SINE Alu 0 322 1 1109 171 4 40 chr10 45376084 45376312 -94940453 + AluJo SINE Alu 92 311 -1 247 268 82 55 chr10 45376391 45376574 -94940191 + L1ME4a LINE L1 4805 4992 -1154 568 298 5 19 chr10 45376845 45377060 -94939705 + L1ME4a LINE L1 5258 5469 -2339 4696 139 11 19 chr10 45377314 45378103 -94938662 - LTR39 LTR ERV1 0 783 1 312 260 127 46 chr10 45378731 45378904 -94937861 + L1ME4a LINE L1 5930 6116 -5 6017 152 42 28 chr10 45379186 45380994 -94935771 - L1PA16 LINE L1 0 6166 4386 2201 96 7 0 chr10 45380994 45381287 -94935478 + AluSx SINE Alu 1 295 -17 6017 152 42 28 chr10 45381287 45381324 -94935441 - L1PA16 LINE L1 -1780 4386 4351 4513 88 29 3 chr10 45381324 45381941 -94934824 + LTR10E LTR ERV1 1 633 0 6017 152 42 28 chr10 45381941 45382219 -94934546 - L1PA16 LINE L1 -1815 4351 4027 515 304 6 6 chr10 45382220 45382378 -94934387 + MIR SINE MIR 61 218 -44 380 259 9 18 chr10 45382641 45382753 -94934012 - Charlie8 DNA MER1_type -2233 184 74 1364 194 7 19 chr10 45382869 45383178 -94933587 + MER33 DNA MER1_type 20 324 0 227 256 49 12 chr10 45383924 45384006 -94932759 + GA-rich Low_complexity Low_complexity 6 90 0 233 312 27 71 chr10 45384091 45384245 -94932520 - MIR SINE MIR -62 146 8 284 194 56 28 chr10 45384932 45385004 -94931761 + MIR SINE MIR 114 187 -75 366 252 111 87 chr10 45385960 45386329 -94930436 - MLT1K LTR MaLR -13 575 198 237 263 50 25 chr10 45389923 45390003 -94926762 + L2 LINE L2 3231 3312 -1 201 288 34 0 chr10 45390200 45390259 -94926506 + L2 LINE L2 2997 3057 -215 1980 120 3 0 chr10 45390522 45390806 -94925959 + AluSx SINE Alu 1 285 -27 32 0 0 0 chr10 45390809 45390841 -94925924 + AT_rich Low_complexity Low_complexity 1 32 0 499 276 294 7 chr10 45391310 45391585 -94925180 - LTR16B LTR ERVL -77 387 34 610 257 64 32 chr10 45391643 45391753 -94925012 + L1MC1 LINE L1 358 478 -5592 1667 195 8 35 chr10 45391753 45392128 -94924637 - MLT1A1 LTR MaLR 0 365 1 610 257 64 32 chr10 45392128 45392204 -94924561 + L1MC1 LINE L1 478 550 -5520 1123 91 0 0 chr10 45392211 45392354 -94924411 + AluSq/x SINE Alu 1 143 -169 1503 90 192 8 chr10 45392354 45392609 -94924156 + AluSg SINE Alu 1 302 -8 534 225 16 8 chr10 45392610 45392739 -94924026 + L1ME2 LINE L1 6025 6154 -10 5277 189 66 26 chr10 45393006 45393512 -94923253 + L1MC1 LINE L1 4060 4544 -1723 2566 36 3 0 chr10 45393512 45393818 -94922947 - AluY SINE Alu -4 307 1 5277 189 66 26 chr10 45393818 45394566 -94922199 + L1MC1 LINE L1 4544 5261 -1006 2059 101 28 0 chr10 45394566 45394854 -94921911 + AluSp SINE Alu 5 300 -13 5277 189 66 26 chr10 45394854 45395669 -94921096 + L1MC1 LINE L1 5261 6211 -56 2080 111 86 11 chr10 45395669 45396020 -94920745 - MER51B LTR ERV1 0 377 1 5277 189 66 26 chr10 45396020 45396078 -94920687 + L1MC1 LINE L1 6211 6265 -2 382 269 174 48 chr10 45396134 45396702 -94920063 + L1MC4a LINE L1 5255 5894 -1914 709 218 41 12 chr10 45397271 45397441 -94919324 - MER58A DNA MER1_type -3 221 47 919 171 11 11 chr10 45402555 45402731 -94914034 - FAM SINE Alu -1 48 1 217 214 61 143 chr10 45404711 45404809 -94911956 - L2 LINE L2 -7 3306 3217 2364 53 0 0 chr10 45406538 45406849 -94909916 - AluSq SINE Alu 0 311 1 999 269 152 2 chr10 45412634 45413054 -94903711 + L1MC4a LINE L1 5352 5834 -1974 565 209 86 81 chr10 45413346 45413507 -94903258 - MER112 DNA MER1_type -49 211 47 2727 16 0 0 chr10 45413507 45413816 -94902949 + AluY SINE Alu 1 309 -2 565 209 86 81 chr10 45413816 45413864 -94902901 - MER112 DNA MER1_type -213 47 1 22 35 0 0 chr10 45413885 45413914 -94902851 + AT_rich Low_complexity Low_complexity 1 29 0 1044 242 194 28 chr10 45414062 45414558 -94902207 - MLT1E2 LTR MaLR -38 588 11 188 302 0 0 chr10 45416264 45416307 -94900458 + L2 LINE L2 3266 3308 -5 601 186 0 39 chr10 45416345 45416474 -94900291 - Charlie1 DNA MER1_type 0 2761 2638 596 222 134 0 chr10 45416450 45416621 -94900144 - Charlie1 DNA MER1_type -2513 248 55 * 9894 178 76 11 chr10 45418531 45420207 -94896558 + L1M2 LINE L1 1 1812 -5037 1721 151 0 14 chr10 45420207 45420485 -94896280 + AluJo SINE Alu 3 276 -36 9894 178 76 11 chr10 45420485 45420676 -94896089 + L1M2 LINE L1 1812 1989 -4860 2023 105 0 7 chr10 45420792 45421116 -94895649 + AluSx SINE Alu 1 322 0 349 338 30 15 chr10 45421944 45422077 -94894688 - L2 LINE L2 -4 3268 3134 5188 211 29 22 chr10 45422209 45423470 -94893295 - L1 LINE L1 -925 5221 3952 1086 275 63 38 chr10 45423461 45423703 -94893062 + L1M4 LINE L1 4087 4321 -1825 * 195 42 0 0 chr10 45423703 45423727 -94893038 + (TA)n Simple_repeat Simple_repeat 1 24 0 1086 275 63 38 chr10 45423727 45424120 -94892645 + L1M4 LINE L1 4321 4738 -1408 316 357 60 5 chr10 45424255 45424440 -94892325 - L2 LINE L2 -263 3009 2815 2785 211 93 34 chr10 45424465 45425228 -94891537 - L1ME1 LINE L1 -9 6157 5350 894 164 0 0 chr10 45425229 45425375 -94891390 - FRAM SINE Alu -13 163 18 761 200 54 38 chr10 45425395 45425493 -94891272 - L1ME1 LINE L1 -782 5364 5269 2488 62 0 0 chr10 45425493 45425797 -94890968 - AluY SINE Alu -7 304 1 761 200 54 38 chr10 45425797 45425938 -94890827 - L1ME1 LINE L1 -877 5269 5121 426 294 182 34 chr10 45425945 45426411 -94890354 - L2 LINE L2 -1085 2229 1695 832 246 19 58 chr10 45426665 45426925 -94889840 - MER46C DNA MER2_type -1 337 88 1834 87 4 8 chr10 45426943 45427197 -94889568 - AluY SINE Alu -6 305 53 4538 124 51 20 chr10 45427315 45428106 -94888659 + L1MA4A LINE L1 5489 6303 0 214 305 133 8 chr10 45429074 45429202 -94887563 - L2 LINE L2 -57 3256 3113 2198 94 0 0 chr10 45430188 45430476 -94886289 + AluSg SINE Alu 1 288 -22 703 211 0 0 chr10 45430762 45430890 -94885875 + FLAM_A SINE Alu 1 128 -5 287 312 119 0 chr10 45431093 45431202 -94885563 - MIR SINE MIR -46 216 95 280 244 22 44 chr10 45431202 45431292 -94885473 - HsTC2 DNA Tc2 -581 1317 1230 243 257 57 0 chr10 45431321 45431391 -94885374 - HsTC2 DNA Tc2 -1823 75 2 243 0 0 0 chr10 45431735 45431762 -94885003 + (TCTCCC)n Simple_repeat Simple_repeat 1 27 0 5529 68 42 10 chr10 45431774 45432585 -94884180 + SVA Other Other 32 868 -518 6510 64 14 30 chr10 45432628 45433615 -94883150 + SVA Other Other 431 1386 0 405 268 36 9 chr10 45433697 45433809 -94882956 - L2 LINE L2 0 3313 3199 1904 204 258 18 chr10 45435833 45436346 -94880419 + L1MB8 LINE L1 4533 5223 -923 557 207 7 64 chr10 45436346 45436486 -94880279 + FLAM_C SINE Alu 2 133 0 1904 204 258 18 chr10 45436486 45436595 -94880170 + L1MB8 LINE L1 5223 5305 -841 670 197 0 8 chr10 45436596 45436718 -94880047 + FLAM_C SINE Alu 2 122 -21 423 0 0 0 chr10 45436718 45436765 -94880000 + (TAA)n Simple_repeat Simple_repeat 2 48 0 3005 201 47 25 chr10 45436766 45437253 -94879512 + L1MB8 LINE L1 5370 5880 -298 2057 152 0 0 chr10 45437253 45437563 -94879202 + AluJb SINE Alu 1 310 -2 3005 201 47 25 chr10 45437563 45437803 -94878962 + L1MB8 LINE L1 5880 6113 -65 12745 40 1 1 chr10 45437943 45439619 -94877146 + L1P2 LINE L1 1732 3405 -2741 7868 23 83 6 chr10 45439600 45441130 -94875635 + L1P2 LINE L1 4154 5819 -336 * 14008 218 33 24 chr10 45441237 45443651 -94873114 + L1MB7 LINE L1 1424 3814 -2584 2079 127 44 41 chr10 45443651 45444014 -94872751 + THE1B LTR MaLR 1 364 0 10953 108 7 16 chr10 45444014 45445609 -94871156 + THE1B-int LTR MaLR 1 1580 0 2292 113 33 28 chr10 45445609 45445971 -94870794 + THE1B LTR MaLR 1 364 0 14008 218 33 24 chr10 45445971 45446668 -94870097 + L1MB7 LINE L1 3814 4503 -1895 2166 129 0 3 chr10 45446668 45446979 -94869786 + AluSx SINE Alu 1 310 -2 14008 218 33 24 chr10 45446979 45447609 -94869156 + L1MB7 LINE L1 4503 5654 -744 2562 195 88 12 chr10 45447744 45448837 -94867928 + L1MD1 LINE L1 4725 5904 -338 1217 250 106 40 chr10 45448877 45449597 -94867168 + L1MDa LINE L1 1562 2328 -4212 2203 92 0 7 chr10 45449736 45450074 -94866691 + AluSc SINE Alu 1 336 0 251 204 107 10 chr10 45450074 45450177 -94866588 + L1MDa LINE L1 2600 2712 -3828 * 2211 164 15 15 chr10 45450163 45450622 -94866143 + L1MB7 LINE L1 5942 6400 -20 2234 83 7 0 chr10 45450644 45450933 -94865832 + AluSp SINE Alu 1 291 -22 284 209 0 33 chr10 45452553 45452644 -94864121 + MER31-int LTR ERV1 1199 1286 -3650 350 214 61 23 chr10 45452703 45452834 -94863931 + MER31-int LTR ERV1 1311 1446 -3490 1062 81 6 6 chr10 45453146 45453306 -94863459 - LTR7 LTR ERV1 0 450 291 401 74 284 12 chr10 45453303 45453384 -94863381 - LTR7 LTR ERV1 -347 103 1 * 391 250 157 87 chr10 45453565 45453783 -94862982 + MER31-int LTR ERV1 2018 2219 -2717 2079 167 52 21 chr10 45453783 45454202 -94862563 - MSTB1 LTR MaLR 0 432 1 391 250 157 87 chr10 45454202 45454671 -94862094 + MER31-int LTR ERV1 2219 2753 -2183 180 0 0 0 chr10 45454814 45454834 -94861931 + (A)n Simple_repeat Simple_repeat 1 20 0 217 284 21 63 chr10 45455050 45455145 -94861620 + MER5B DNA MER1_type 1 91 -87 22 56 0 0 chr10 45455288 45455324 -94861441 + AT_rich Low_complexity Low_complexity 1 36 0 2482 207 71 95 chr10 45455433 45456413 -94860352 + MER31-int LTR ERV1 3171 4127 -809 1208 118 0 6 chr10 45456755 45456925 -94859840 - AluSx SINE Alu -143 169 1 232 261 58 14 chr10 45456927 45456996 -94859769 - MIR SINE MIR -117 145 74 294 194 15 0 chr10 45458005 45458072 -94858693 + MLT1J LTR MaLR 110 177 -334 1832 163 49 46 chr10 45458291 45458702 -94858063 + LTR3 LTR ERVK 5 416 -16 205 290 15 99 chr10 45459322 45459453 -94857312 - L2 LINE L2 -2 3311 3192 1721 118 53 118 chr10 45459994 45460410 -94856355 + MLT1B LTR MaLR 1 389 -1 853 193 0 7 chr10 45460579 45460719 -94856046 - AluJb SINE Alu -40 272 134 1569 176 42 21 chr10 45460723 45461007 -94855758 - AluJo SINE Alu -22 290 1 1893 104 0 22 chr10 45461104 45461374 -94855391 + AluSx SINE Alu 35 298 -14 2444 77 0 0 chr10 45462100 45462411 -94854354 - AluY SINE Alu 0 311 1 212 293 0 0 chr10 45462518 45462576 -94854189 - L2 LINE L2 -2 3270 3213 1274 182 4 0 chr10 45462625 45462856 -94853909 - MER46A DNA MER2_type -4 232 1 436 276 191 0 chr10 45463384 45463536 -94853229 - MER5A DNA MER1_type 0 189 9 924 200 24 0 chr10 45463594 45463759 -94853006 - FAM SINE Alu -3 172 4 1190 183 57 37 chr10 45464601 45464652 -94852113 - Charlie1 DNA MER1_type -7 2754 2706 2359 95 3 0 chr10 45464652 45464958 -94851807 + AluSq SINE Alu 1 307 -6 1190 183 57 37 chr10 45464958 45465255 -94851510 - Charlie1 DNA MER1_type -55 2706 2399 315 65 0 0 chr10 45465555 45465601 -94851164 + (GGGGA)n Simple_repeat Simple_repeat 3 48 0 391 127 51 0 chr10 45465626 45465705 -94851060 + A-rich Low_complexity Low_complexity 5 87 0 734 230 43 40 chr10 45465706 45466006 -94850759 + L1MEc LINE L1 1451 1751 -4633 257 225 70 0 chr10 45466206 45466277 -94850488 + L1M4c LINE L1 2556 2631 -3751 1823 252 89 34 chr10 45466299 45467642 -94849123 + L1MEc LINE L1 1901 3266 -3116 852 230 6 0 chr10 45467644 45467822 -94848943 + MLT1B LTR MaLR 212 390 0 381 237 35 0 chr10 45467824 45467938 -94848827 + L1MEc LINE L1 4241 4358 -2024 230 122 0 0 chr10 45467977 45468018 -94848747 - L1MB4 LINE L1 -13 6167 6127 2198 122 0 3 chr10 45468184 45468480 -94848285 + AluSx SINE Alu 1 295 -17 2055 165 65 8 chr10 45469019 45469420 -94847345 + MSTA LTR MaLR 5 428 0 235 378 92 16 chr10 45471077 45471150 -94845615 - L2 LINE L2 -638 2676 2610 1477 199 62 0 chr10 45471150 45471471 -94845294 - MER58B DNA MER1_type 0 341 1 235 378 92 16 chr10 45471471 45471646 -94845119 - L2 LINE L2 -704 2610 2409 590 271 86 66 chr10 45471716 45471960 -94844805 + MIR SINE MIR 14 262 0 945 272 248 20 chr10 45472440 45473272 -94843493 - Charlie2a DNA MER1_type -1810 1052 32 470 200 52 7 chr10 45473470 45473605 -94843160 - L1MC4 LINE L1 -1 8041 7901 377 325 61 19 chr10 45473611 45473823 -94842942 - L1MC4 LINE L1 -266 7776 7556 26 0 0 0 chr10 45473863 45473889 -94842876 + AT_rich Low_complexity Low_complexity 1 26 0 334 203 0 14 chr10 45474618 45474692 -94842073 + AluJ/FRAM SINE Alu 224 296 -6 1748 173 21 0 chr10 45474957 45475246 -94841519 + AluJo SINE Alu 11 305 -7 228 158 0 0 chr10 45477198 45477236 -94839529 + L1MC3 LINE L1 7068 7105 -680 255 269 13 13 chr10 45477237 45477315 -94839450 + MLT1F1 LTR MaLR 45 122 -445 2596 153 28 8 chr10 45477316 45477813 -94838952 + L1MC3 LINE L1 7189 7695 -90 1656 238 37 0 chr10 45477821 45478224 -94838541 + L1PB4 LINE L1 10 427 -6422 555 137 16 3 chr10 45478276 45478385 -94838380 + MSTB1 LTR MaLR 315 425 -1 6292 192 46 52 chr10 45478385 45480163 -94836602 + L1PB4 LINE L1 3255 5051 -1807 1180 141 11 5 chr10 45480163 45480348 -94836417 - AluJo SINE Alu -9 303 118 6292 192 46 52 chr10 45480348 45482055 -94834710 + L1PB4 LINE L1 5051 6767 -91 447 190 9 24 chr10 45482072 45482196 -94834569 + L1MC3 LINE L1 7661 7995 0 1698 159 40 10 chr10 45482204 45482505 -94834260 + AluJo SINE Alu 1 310 -2 555 244 110 18 chr10 45482634 45482962 -94833803 + L1MEc LINE L1 996 1353 -5043 22 0 0 0 chr10 45482989 45483011 -94833754 + AT_rich Low_complexity Low_complexity 1 22 0 529 242 249 11 chr10 45483011 45483284 -94833481 + L1MEc LINE L1 1665 2002 -4394 1527 204 16 33 chr10 45484087 45484455 -94832310 + MLT1A1 LTR MaLR 4 365 0 26 0 0 0 chr10 45484760 45484786 -94831979 + AT_rich Low_complexity Low_complexity 1 26 0 472 233 67 0 chr10 45485533 45485653 -94831112 - MER58A DNA MER1_type -5 219 92 2234 76 0 0 chr10 45485653 45485929 -94830836 + AluY SINE Alu 1 276 -35 561 206 0 10 chr10 45485965 45486067 -94830698 - MER58A DNA MER1_type -6 101 1 1254 205 110 20 chr10 45687593 45687949 -94628816 + MER4E LTR ERV1 1 388 -391 2634 163 35 4 chr10 45688045 45688535 -94628230 + L1PA10 LINE L1 5655 6159 -9 2817 13 0 3 chr10 45688791 45689098 -94627667 + AluYa5 SINE Alu 1 306 -5 270 0 0 0 chr10 45689372 45689402 -94627363 + (T)n Simple_repeat Simple_repeat 1 30 0 5550 78 1 1 chr10 45692026 45692749 -94624016 - L1PA5 LINE L1 0 6154 5432 1799 178 0 14 chr10 45692904 45693197 -94623568 + AluJb SINE Alu 1 289 -23 332 153 333 0 chr10 45693508 45693580 -94623185 + Tigger3(Golem) DNA MER2_type 2 97 -2932 * 1290 126 10 24 chr10 45693578 45693785 -94622980 + Tigger3(Golem) DNA MER2_type 2802 3005 -24 2195 123 29 6 chr10 45693797 45694148 -94622617 - L1MB1 LINE L1 0 6168 5810 5459 205 24 8 chr10 45694301 45695523 -94621242 - L1 LINE L1 -1934 4212 2972 918 167 94 11 chr10 45696909 45697089 -94619676 + L1PB4 LINE L1 5956 6150 -6 2266 109 3 3 chr10 45697096 45697447 -94619318 + AluY SINE Alu 1 351 0 336 264 69 0 chr10 45698641 45698728 -94618037 + MER81 DNA DNA 22 114 0 664 172 94 163 chr10 45699793 45699874 -94616891 + MER58A DNA MER1_type 1 86 -2334 2172 93 0 4 chr10 45699874 45700152 -94616613 - AluSg1 SINE Alu -32 277 1 664 172 94 163 chr10 45700152 45700303 -94616462 + MER58A DNA MER1_type 86 217 -7 272 235 0 24 chr10 45700423 45700508 -94616257 + GA-rich Low_complexity Low_complexity 3 85 0 279 318 129 26 chr10 45700829 45701209 -94615556 + L1MC/D LINE L1 5342 5760 -2048 1800 159 34 0 chr10 45701328 45701624 -94615141 - AluJo SINE Alu -6 306 1 314 271 66 49 chr10 45702741 45702844 -94613921 + MIR SINE MIR 86 193 -69 2243 183 71 5 chr10 45702844 45703282 -94613483 - MLT1C LTR MaLR 0 467 1 314 271 66 49 chr10 45703282 45703300 -94613465 + MIR SINE MIR 193 209 -53 3021 150 103 2 chr10 45703773 45704358 -94612407 - MER73 LTR ERVL 0 644 1 1532 187 41 38 chr10 45705055 45705424 -94611341 + MLT1A2 LTR MaLR 1 370 -4 1433 167 46 43 chr10 45705573 45705896 -94610869 + MER33 DNA MER1_type 1 324 0 416 325 34 43 chr10 45705919 45706153 -94610612 + MIR SINE MIR 21 252 -10 281 311 168 16 chr10 45706853 45707174 -94609591 + L3 LINE CR1 1008 1377 -200 264 296 72 20 chr10 45708365 45708517 -94608248 + L1ME LINE L1 5629 5788 -333 2870 149 18 2 chr10 45708606 45709061 -94607704 + L1PA15 LINE L1 5704 6165 0 219 230 184 23 chr10 45710211 45710298 -94606467 - MIR SINE MIR -61 147 47 403 292 2 22 chr10 45710911 45711063 -94605702 - MIR SINE MIR -57 151 15 1576 148 4 50 chr10 45711438 45711715 -94605050 - AluSx SINE Alu -48 264 1 247 303 92 0 chr10 45711725 45711834 -94604931 - L1MC/D LINE L1 -2008 5800 5682 427 178 33 11 chr10 45715533 45715623 -94601142 + MLT1J2 LTR MaLR 67 158 -292 681 239 41 65 chr10 45716874 45717167 -94599598 - HAL1 LINE L1 -977 1530 1245 2037 146 17 3 chr10 45717181 45717873 -94598892 - L1PA16 LINE L1 -7 6159 5414 * 5984 214 35 20 chr10 45717869 45718275 -94598490 + L1P LINE L1 3987 4385 -1761 315 0 0 0 chr10 45718275 45718310 -94598455 + (CA)n Simple_repeat Simple_repeat 2 36 0 5984 214 35 20 chr10 45718310 45718993 -94597772 + L1P LINE L1 4385 5104 -1042 2140 134 0 3 chr10 45718993 45719307 -94597458 + AluSq SINE Alu 1 313 0 5984 214 35 20 chr10 45719307 45719608 -94597157 + L1P LINE L1 5104 5399 -747 450 277 119 45 chr10 45719605 45719941 -94596824 - HAL1 LINE L1 -1340 1167 807 * 2770 174 36 6 chr10 45720135 45720640 -94596125 - MLT2B1 LTR ERVL 0 520 1 1432 91 58 4 chr10 45720898 45721139 -94595626 + L1MA8 LINE L1 6037 6290 -1 3277 227 48 17 chr10 45721142 45722832 -94593933 + L1MC3 LINE L1 4256 5400 -746 488 282 95 63 chr10 45723123 45723662 -94593103 - HAL1 LINE L1 -1680 827 272 860 135 7 14 chr10 45723793 45723941 -94592824 + AluYa5 SINE Alu 165 311 0 2002 121 6 50 chr10 45725845 45726168 -94590597 + AluSg SINE Alu 1 309 -1 364 244 0 13 chr10 45726966 45727044 -94589721 + Charlie1a DNA MER1_type 1 77 -1378 2390 109 0 0 chr10 45727045 45727358 -94589407 - AluSq SINE Alu 0 313 1 944 207 121 12 chr10 45727424 45727680 -94589085 + Charlie1a DNA MER1_type 86 369 -1086 1742 226 178 29 chr10 45727718 45727785 -94588980 + Charlie1a DNA MER1_type 437 493 -2268 1251 172 101 30 chr10 45727785 45728053 -94588712 + AluJo SINE Alu 1 287 -25 1742 226 178 29 chr10 45728053 45728532 -94588233 + Charlie1a DNA MER1_type 493 899 -1862 2141 129 3 0 chr10 45728532 45728827 -94587938 - AluSx SINE Alu -12 300 5 1742 226 178 29 chr10 45728827 45728841 -94587924 + Charlie1a DNA MER1_type 899 910 -1851 2187 114 0 0 chr10 45728841 45729140 -94587625 - AluY SINE Alu -12 299 1 1742 226 178 29 chr10 45729140 45729306 -94587459 + Charlie1a DNA MER1_type 910 1274 -181 718 250 6 0 chr10 45729322 45729478 -94587287 + MER20 DNA MER1_type 60 216 -3 229 244 59 30 chr10 45729478 45729613 -94587152 + Charlie1a DNA MER1_type 1302 1440 -15 676 258 0 0 chr10 45730100 45730259 -94586506 - FRAM SINE Alu -6 160 2 1233 87 0 0 chr10 45730288 45730437 -94586328 - AluSp SINE Alu -35 278 130 265 203 78 109 chr10 45730586 45730714 -94586051 - MIR3 SINE MIR -1 207 84 575 240 46 29 chr10 45730752 45730927 -94585838 - MER5B DNA MER1_type 0 178 1 2462 81 0 0 chr10 45732751 45733059 -94583706 + AluY SINE Alu 2 309 -2 2438 53 0 0 chr10 45733115 45733443 -94583322 - AluY SINE Alu 0 328 1 2666 172 9 2 chr10 45733729 45734153 -94582612 + MER52-int LTR ERV1 2260 2687 -4399 1934 93 0 0 chr10 45734153 45734399 -94582366 + AluSg SINE Alu 49 294 -16 638 235 0 8 chr10 45734931 45735063 -94581702 + FLAM_A SINE Alu 1 131 -2 1588 180 3 30 chr10 45735066 45735361 -94581404 + AluJo SINE Alu 1 287 -25 238 313 164 36 chr10 45735708 45735903 -94580862 - L2 LINE L2 -240 3073 2854 486 172 54 0 chr10 45735911 45736004 -94580761 + LTR47A LTR ERVL 5 102 -350 2292 106 0 0 chr10 45736015 45736317 -94580448 - AluSx SINE Alu -10 302 1 1344 158 28 28 chr10 45736318 45736565 -94580200 + LTR47A LTR ERVL 206 452 0 3011 158 22 50 chr10 45736569 45737170 -94579595 + L1MB2 LINE L1 5586 6169 -2 2132 108 11 3 chr10 45737195 45737481 -94579284 - AluSx SINE Alu -24 288 1 2249 104 3 13 chr10 45737494 45737803 -94578962 - AluSp SINE Alu -7 306 1 2103 129 7 0 chr10 45737803 45738098 -94578667 - AluSp SINE Alu -16 297 1 1647 214 41 37 chr10 45738112 45738603 -94578162 + L1MD3 LINE L1 7160 7829 -151 41 82 0 0 chr10 45738620 45738717 -94578048 + AT_rich Low_complexity Low_complexity 1 97 0 266 316 42 0 chr10 45738720 45738815 -94577950 + L1MD3 LINE L1 7840 7938 -57 348 24 0 0 chr10 45739445 45739486 -94577279 + (TCC)n Simple_repeat Simple_repeat 2 42 0 2049 113 7 0 chr10 45739553 45739881 -94576884 + AluSq SINE Alu 1 330 0 1034 255 168 5 chr10 45739937 45740372 -94576393 + LTR33 LTR ERVL 15 520 -1 235 176 0 0 chr10 45741940 45741991 -94574774 + MER69 DNA AcHobo 2444 2494 -32 243 157 0 0 chr10 45742517 45742568 -94574197 - MIR SINE MIR -114 148 99 2115 130 0 3 chr10 45743957 45744265 -94572500 - AluSx SINE Alu -5 307 1 2582 72 27 0 chr10 45744476 45744811 -94571954 + LTR14A LTR ERVK 1 344 0 183 80 0 0 chr10 45745573 45745598 -94571167 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 2345 76 0 3 chr10 45745819 45746121 -94570644 + AluY SINE Alu 1 301 -10 2260 74 40 0 chr10 45746123 45746421 -94570344 + AluY SINE Alu 2 311 0 509 294 29 68 chr10 45746502 45746593 -94570172 + L1M4 LINE L1 4963 5056 -1090 1446 149 137 57 chr10 45746593 45746626 -94570139 - MLT1A1 LTR MaLR -2 363 334 2128 128 0 0 chr10 45746626 45746923 -94569842 + AluSx SINE Alu 1 297 -15 1446 149 137 57 chr10 45746923 45747225 -94569540 - MLT1A1 LTR MaLR -31 334 1 509 294 29 68 chr10 45747225 45747412 -94569353 + L1M4 LINE L1 5056 5230 -916 353 300 16 1 chr10 45747419 45747556 -94569209 + L1P LINE L1 5290 5427 -729 1032 132 32 73 chr10 45747968 45748134 -94568631 - L1MA4A LINE L1 -4 6299 6143 2009 125 0 69 chr10 45748134 45748469 -94568296 - AluSx SINE Alu 0 312 1 1032 132 32 73 chr10 45748469 45748521 -94568244 - L1MA4A LINE L1 -160 6143 6090 2234 98 0 0 chr10 45749014 45749310 -94567455 - AluY SINE Alu -15 296 1 805 96 0 0 chr10 45750385 45750489 -94566276 + AluSp SINE Alu 1 104 -209 433 282 110 66 chr10 45751246 45751565 -94565200 - L2 LINE L2 -348 2966 2634 274 323 60 15 chr10 45751749 45751908 -94564857 - MIR SINE MIR -67 141 18 724 299 47 5 chr10 45752293 45752507 -94564258 - MIR SINE MIR -11 251 29 313 297 191 29 chr10 45753345 45753554 -94563211 + MIR SINE MIR 2 244 -18 669 76 0 0 chr10 45753860 45753952 -94562813 + (TGGA)n Simple_repeat Simple_repeat 3 94 0 195 220 102 0 chr10 45755205 45755264 -94561501 + MIR SINE MIR 79 143 -119 322 319 86 14 chr10 45755664 45755806 -94560959 - MIR SINE MIR -62 146 16 297 190 63 13 chr10 45756355 45756434 -94560331 + MER53 DNA DNA 103 185 -4 364 278 191 0 chr10 45756938 45757111 -94559654 - MIR SINE MIR -56 206 1 456 319 42 28 chr10 45757288 45757501 -94559264 - MIR SINE MIR -14 248 33 250 365 51 0 chr10 45758159 45758293 -94558472 - MIR3 SINE MIR -68 140 8 220 364 91 15 chr10 45758653 45758785 -94557980 - L2 LINE L2 -9 3263 3122 526 317 26 30 chr10 45759501 45759737 -94557028 - MIR SINE MIR -20 242 3 275 202 10 0 chr10 45761035 45761134 -94555631 + (TG)n Simple_repeat Simple_repeat 1 100 0 186 218 50 69 chr10 45763627 45763728 -94553037 - L2 LINE L2 -388 2925 2827 942 202 6 6 chr10 45764711 45764894 -94551871 + AluJo SINE Alu 122 304 -8 294 317 55 21 chr10 45764998 45765143 -94551622 + MIR3 SINE MIR 37 186 -22 213 207 172 0 chr10 45765350 45765408 -94551357 - MIR SINE MIR -63 145 78 264 284 69 10 chr10 45766248 45766350 -94550415 + MER5A DNA MER1_type 39 146 -43 511 335 149 15 chr10 45767198 45767595 -94549170 - L3 LINE CR1 -117 1460 1011 334 245 20 89 chr10 45767562 45767638 -94549127 + MIR SINE MIR 20 87 -121 * 2432 131 80 10 chr10 45767638 45768036 -94548729 - MSTB LTR MaLR 0 426 1 334 245 20 89 chr10 45768036 45768094 -94548671 + MIR SINE MIR 87 147 -61 2098 220 108 13 chr10 45768095 45768632 -94548133 - MLT1G LTR MaLR -2 588 1 1153 172 57 97 chr10 45768830 45769179 -94547586 - MLT1A2 LTR MaLR 0 374 40 2258 71 10 10 chr10 45769399 45769710 -94547055 + AluY SINE Alu 1 311 0 210 71 0 0 chr10 45769710 45769738 -94547027 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 1727 76 8 16 chr10 45770390 45770641 -94546124 + AluY SINE Alu 62 310 -1 1954 189 90 9 chr10 45771276 45771721 -94545044 + MER31A LTR ERV1 1 481 -4 324 237 31 0 chr10 45771971 45772068 -94544697 + LTR67 LTR ERVL 458 557 0 311 267 183 8 chr10 45772090 45772210 -94544555 + L2 LINE L2 3167 3307 -6 270 266 0 13 chr10 45772649 45772728 -94544037 - MLT1L LTR MaLR -535 80 3 254 368 94 5 chr10 45772771 45772972 -94543793 - L2 LINE L2 -218 3054 2836 30 0 0 0 chr10 45774287 45774317 -94542448 + GC_rich Low_complexity Low_complexity 1 30 0 289 244 80 66 chr10 45774578 45774791 -94541974 + L1ME1 LINE L1 5175 5390 -756 1245 265 39 18 chr10 45774825 45775267 -94541498 + L1ME1 LINE L1 5527 5977 -187 244 70 0 0 chr10 45775268 45775311 -94541454 + MADE1 DNA Mariner 1 43 -37 394 256 30 12 chr10 45775356 45775524 -94541241 + L1ME1 LINE L1 5993 6163 -3 1747 216 58 8 chr10 45775525 45776180 -94540585 - L1MD2 LINE L1 -522 5720 5042 1584 210 197 4 chr10 45776183 45776712 -94540053 + L1MD2 LINE L1 5719 6349 -10 393 22 0 0 chr10 45776728 45776774 -94539991 + (TC)n Simple_repeat Simple_repeat 2 47 0 216 0 0 0 chr10 45776773 45776797 -94539968 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 1076 159 2 19 chr10 45776867 45777095 -94539670 - MLT2B2 LTR ERVL 0 515 304 1704 197 24 40 chr10 45777095 45777466 -94539299 + MLT1A1 LTR MaLR 1 365 0 1683 183 47 37 chr10 45778766 45779148 -94537617 - MLT1B LTR MaLR 0 390 5 516 319 72 78 chr10 45780209 45780738 -94536027 + L1MEd LINE L1 528 1053 -5066 262 295 48 0 chr10 45780784 45780950 -94535815 + (CACCT)n Simple_repeat Simple_repeat 3 176 0 190 321 0 0 chr10 45781408 45781464 -94535301 - MIR SINE MIR 0 262 207 679 136 34 17 chr10 45782032 45782209 -94534556 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 151 0 4 chr10 45784456 45784657 -94532108 + AluJo SINE Alu 4 285 -27 515 380 109 6 chr10 45786240 45786590 -94530175 - L1 LINE L1 -2042 4104 3719 261 121 43 43 chr10 45786783 45786923 -94529842 + (CA)n Simple_repeat Simple_repeat 1 140 0 309 111 51 26 chr10 45786947 45787064 -94529701 + (CA)n Simple_repeat Simple_repeat 1 120 0 2821 195 28 4 chr10 45788689 45789398 -94527367 - L1M2 LINE L1 -4071 2778 2053 2732 165 7 0 chr10 45789437 45789862 -94526903 - MSTA LTR MaLR 0 428 1 758 260 96 12 chr10 45791735 45791979 -94524786 - MIR SINE MIR 0 262 6 3039 141 54 6 chr10 45793100 45793639 -94523126 + LTR24B LTR ERV1 4 568 -8 664 218 0 107 chr10 45793962 45794224 -94522541 + LTR23-int LTR ERV1 417 650 -4473 301 297 0 0 chr10 45795850 45795941 -94520824 + L1PA15-16 LINE L1 1474 1564 -5285 11971 247 30 14 chr10 45795945 45797233 -94519532 + L1PA16 LINE L1 1355 2621 -4228 2301 117 10 0 chr10 45797233 45797542 -94519223 + AluSp SINE Alu 1 312 -1 11971 247 30 14 chr10 45797542 45800158 -94516607 + L1PA16 LINE L1 2621 5412 -1437 198 0 0 0 chr10 45800158 45800180 -94516585 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 11971 247 30 14 chr10 45800180 45800644 -94516121 + L1PA16 LINE L1 5412 5867 -982 29078 113 25 80 chr10 45800657 45806120 -94510645 + L1PA6 LINE L1 12 5775 -391 6779 72 7 13 chr10 45806120 45806167 -94510598 + L1PA6 LINE L1 5254 5300 -854 2249 123 3 0 chr10 45806167 45806476 -94510289 + AluSp SINE Alu 1 310 -3 6779 72 7 13 chr10 45806476 45807335 -94509430 + L1PA6 LINE L1 5300 6154 0 29078 113 25 80 chr10 45807335 45807361 -94509404 + L1PA6 LINE L1 5775 5159 -1007 252 100 0 0 chr10 45807361 45807401 -94509364 + (CA)n Simple_repeat Simple_repeat 1 40 0 29078 113 25 80 chr10 45807401 45807801 -94508964 + L1PA6 LINE L1 5158 5579 -587 2859 148 16 10 chr10 45807808 45808314 -94508451 - L1PA14 LINE L1 -1 6160 5652 1531 313 35 28 chr10 45808352 45809132 -94507633 - L1PA12 LINE L1 -5563 2018 1234 1308 162 0 0 chr10 45809134 45809356 -94507409 - L1PA12 LINE L1 -7350 231 10 2944 169 41 8 chr10 45809356 45809941 -94506824 + L1PA16 LINE L1 6265 6868 -1 23 0 0 0 chr10 45810185 45810208 -94506557 + AT_rich Low_complexity Low_complexity 1 23 0 41 21 0 0 chr10 45810237 45810285 -94506480 + AT_rich Low_complexity Low_complexity 1 48 0 2313 170 20 2 chr10 45810292 45810697 -94506068 + MSTB LTR MaLR 13 424 -2 2164 131 16 0 chr10 45810796 45811102 -94505663 + AluY SINE Alu 1 311 0 2313 102 156 5 chr10 45811247 45811619 -94505146 + MSTA LTR MaLR 1 428 0 577 335 50 33 chr10 45811926 45812386 -94504379 + PABL_B-int LTR ERV1 6231 6698 -424 2952 160 27 2 chr10 45812834 45813389 -94503376 + LTR24B LTR ERV1 1 569 -7 203 218 0 69 chr10 45815091 45815192 -94501573 + (GGCTG)n Simple_repeat Simple_repeat 5 98 0 271 250 98 18 chr10 45815855 45815967 -94500798 + L2 LINE L2 3149 3269 -3 247 148 10 153 chr10 45816710 45816919 -94499846 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 203 179 13 90 chr10 45816870 45817026 -94499739 + (TGGG)n Simple_repeat Simple_repeat 3 146 0 * 216 264 48 48 chr10 45819473 45819657 -94497108 + MIR SINE MIR 41 223 -39 257 293 73 39 chr10 45821207 45821412 -94495353 - L2 LINE L2 -25 3288 3077 367 238 0 9 chr10 45821436 45821541 -94495224 + HAL1b LINE L1 1016 1119 -229 41 78 0 0 chr10 45821630 45821720 -94495045 + AT_rich Low_complexity Low_complexity 1 90 0 219 346 26 0 chr10 45822691 45822769 -94493996 + MIR SINE MIR 167 246 -16 710 179 0 0 chr10 45823289 45823406 -94493359 + MER46A DNA MER2_type 2 118 -118 419 268 16 24 chr10 45824110 45824237 -94492528 + L1ME2 LINE L1 6007 6132 -32 197 289 67 0 chr10 45824659 45824749 -94492016 - L2 LINE L2 -219 3053 2958 277 158 74 11 chr10 45826224 45826319 -94490446 + (CA)n Simple_repeat Simple_repeat 1 101 0 181 132 44 29 chr10 45826359 45826427 -94490338 + (CA)n Simple_repeat Simple_repeat 1 69 0 314 151 70 41 chr10 45826555 45826727 -94490038 + (CA)n Simple_repeat Simple_repeat 2 178 0 295 154 68 43 chr10 45827023 45827185 -94489580 + (CA)n Simple_repeat Simple_repeat 2 167 0 251 19 0 77 chr10 45829713 45829765 -94487000 + (CCCTAA)n Simple_repeat Simple_repeat 4 51 0 231 146 0 0 chr10 45829811 45829852 -94486913 + (CCCTAA)n Simple_repeat Simple_repeat 2 42 0 303 200 20 10 chr10 45831589 45831689 -94485076 + (CA)n Simple_repeat Simple_repeat 1 101 0 307 241 36 12 chr10 45834198 45834281 -94482484 - MIR SINE MIR -105 157 73 8614 121 9 0 chr10 45834657 45835927 -94480838 - HSMAR1 DNA Mariner -5 1282 1 351 259 27 0 chr10 45836396 45836508 -94480257 + HAL1 LINE L1 785 899 -1608 597 237 32 75 chr10 45836514 45836822 -94479943 + HAL1 LINE L1 2176 2470 -37 245 328 30 25 chr10 45836892 45837090 -94479675 + L1MB4 LINE L1 3 201 -6341 4381 183 30 51 chr10 45837090 45838079 -94478686 + LTR5 LTR ERVK 1 969 0 271 290 70 0 chr10 45838441 45838541 -94478224 + L1MB4 LINE L1 804 910 -5736 790 241 8 69 chr10 45838661 45839121 -94477644 + L1MB4 LINE L1 820 1237 -5305 1386 227 58 0 chr10 45839121 45839416 -94477349 + AluJb SINE Alu 1 312 0 790 241 8 69 chr10 45839416 45839430 -94477335 + L1MB4 LINE L1 1237 1250 -5292 1138 209 70 45 chr10 45839441 45840139 -94476626 + L1MB4 LINE L1 1834 2640 -4006 6284 219 27 97 chr10 45840144 45841672 -94475093 + L1MB4 LINE L1 2712 4345 -2333 6250 84 25 2 chr10 45841672 45842956 -94473809 + L1PA11 LINE L1 4822 6174 0 6284 219 27 97 chr10 45842956 45845688 -94471077 + L1MB4 LINE L1 4345 6678 0 293 267 76 19 chr10 45845703 45845808 -94470957 + MIR SINE MIR 25 135 -73 1703 273 48 6 chr10 45846133 45846631 -94470134 - MLT1G LTR MaLR -62 528 10 676 260 61 39 chr10 45846627 45846833 -94469932 + HsTC2 DNA Tc2 1525 1725 -173 * 2093 136 21 47 chr10 45846833 45847216 -94469549 + THE1C LTR MaLR 3 375 0 9715 118 31 19 chr10 45847217 45848047 -94468718 + THE1C-int LTR MaLR 2 863 -717 2190 132 3 0 chr10 45848047 45848351 -94468414 + AluSx SINE Alu 1 305 -7 9715 118 31 19 chr10 45848351 45849079 -94467686 + THE1C-int LTR MaLR 863 1580 0 2078 136 5 46 chr10 45849079 45849470 -94467295 + THE1C LTR MaLR 1 375 0 676 260 61 39 chr10 45849470 45849622 -94467143 + HsTC2 DNA Tc2 1724 1894 -4 446 279 97 16 chr10 45849631 45850019 -94466746 - L1ME LINE L1 -615 5547 5125 354 320 17 28 chr10 45850864 45851045 -94465720 + CT-rich Low_complexity Low_complexity 1 179 0 226 283 133 35 chr10 45852798 45852911 -94463854 - MIR SINE MIR -109 153 30 399 319 132 0 chr10 45854000 45854204 -94462561 - MIR SINE MIR -21 241 11 192 368 105 15 chr10 45855161 45855294 -94461471 + L3 LINE CR1 230 374 -1203 248 328 38 46 chr10 45855527 45855658 -94461107 + L3 LINE CR1 708 837 -740 285 213 16 0 chr10 45855903 45855964 -94460801 - MIR SINE MIR -65 143 82 450 76 0 93 chr10 45857212 45857330 -94459435 + (TG)n Simple_repeat Simple_repeat 1 107 0 309 276 8 52 chr10 45857459 45857593 -94459172 - LTR67 LTR ERVL -2 555 428 2489 211 84 20 chr10 45859173 45859807 -94456958 + MER63C DNA MER1_type 257 930 0 225 301 27 14 chr10 45859997 45860070 -94456695 + LTR67 LTR ERVL 98 171 -386 395 310 33 61 chr10 45860215 45860428 -94456337 + LTR67 LTR ERVL 346 552 -5 299 322 74 27 chr10 45860745 45860894 -94455871 - MIR3 SINE MIR -34 174 19 250 208 0 0 chr10 45862807 45862855 -94453910 + L2 LINE L2 3225 3272 0 221 114 80 57 chr10 45863401 45863489 -94453276 + (TATATG)n Simple_repeat Simple_repeat 2 91 0 182 306 0 0 chr10 45863830 45863879 -94452886 + L2 LINE L2 2983 3031 -241 268 271 24 0 chr10 45863942 45864027 -94452738 + L2 LINE L2 3185 3271 -1 243 0 0 0 chr10 45864925 45864952 -94451813 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 529 292 56 19 chr10 45867398 45867614 -94449151 + MIR SINE MIR 25 248 -14 213 255 171 44 chr10 45868505 45868756 -94448009 + L2 LINE L2 2539 2821 -493 250 312 43 50 chr10 45868766 45868907 -94447858 - MIR SINE MIR -2 260 121 629 257 101 22 chr10 45869163 45869439 -94447326 + L2 LINE L2 3012 3309 -4 188 361 39 15 chr10 45870181 45870311 -94446454 - MIR SINE MIR -83 179 47 639 233 71 59 chr10 45870410 45870663 -94446102 + L2 LINE L2 3058 3313 0 298 319 50 7 chr10 45870828 45870969 -94445796 - MIR3 SINE MIR -10 198 52 1357 167 131 36 chr10 45871442 45871555 -94445210 + MLT1A1 LTR MaLR 3 104 -261 2218 119 0 29 chr10 45871555 45871867 -94444898 + AluSg SINE Alu 1 303 -7 1689 185 0 48 chr10 45871874 45872188 -94444577 + AluJo SINE Alu 1 299 -13 1357 167 131 36 chr10 45872188 45872395 -94444370 + MLT1A1 LTR MaLR 109 362 -3 2066 135 23 0 chr10 45873766 45874070 -94442695 - AluSx SINE Alu -1 311 1 521 242 57 13 chr10 45876466 45876623 -94440142 - MIR SINE MIR -65 197 34 197 325 26 0 chr10 45876705 45876782 -94439983 + MIR SINE MIR 62 140 -122 324 258 19 32 chr10 45877134 45877289 -94439476 - HAL1b LINE L1 -9 1339 1187 228 236 56 0 chr10 45877263 45877335 -94439430 - L1MC4 LINE L1 -1348 6694 6619 * 295 243 29 0 chr10 45877951 45878021 -94438744 + MIR SINE MIR 82 153 -109 1142 183 50 79 chr10 45878225 45878585 -94438180 - MER33 DNA MER1_type 0 324 1 245 365 16 24 chr10 45879127 45879253 -94437512 + MIR SINE MIR 30 154 -108 334 155 191 0 chr10 45879804 45879888 -94436877 - MER103 DNA DNA -63 103 4 479 288 8 0 chr10 45880990 45881115 -94435650 - MER5A DNA MER1_type -7 182 57 301 247 62 21 chr10 45881163 45881260 -94435505 + MER5B DNA MER1_type 3 103 -75 686 261 93 0 chr10 45881966 45882181 -94434584 - MIR SINE MIR -26 236 2 349 51 322 0 chr10 45883121 45883180 -94433585 - MADE1 DNA Mariner -2 78 1 262 296 0 11 chr10 45886913 45887001 -94429764 + MIR SINE MIR 172 258 -4 316 39 77 0 chr10 45887034 45887086 -94429679 + A-rich Low_complexity Low_complexity 2 57 0 1525 270 5 21 chr10 45889528 45889917 -94426848 - MER93a LTR ERV1 -2 400 18 1606 167 85 3 chr10 45890431 45890760 -94426005 + MER46B DNA MER2_type 6 236 0 261 255 0 0 chr10 45890902 45890953 -94425812 - L1MC4 LINE L1 -2160 5648 5598 3342 227 91 92 chr10 45891021 45891476 -94425289 - L1ME1 LINE L1 -5 6161 5707 2159 121 13 0 chr10 45891476 45891774 -94424991 + AluSx SINE Alu 1 302 -10 3342 227 91 92 chr10 45891774 45893192 -94423573 - L1ME1 LINE L1 -459 5707 4124 1290 64 0 0 chr10 45893192 45893348 -94423417 - AluY SINE Alu -10 301 146 3342 227 91 92 chr10 45893348 45893905 -94422860 - L1ME1 LINE L1 -2042 4124 3568 213 295 0 0 chr10 45894710 45894771 -94421994 - MIR SINE MIR -123 139 79 4052 179 26 41 chr10 45895848 45896201 -94420564 - L1MB8 LINE L1 -3 6175 5818 225 167 0 0 chr10 45896201 45896237 -94420528 - Alu SINE Alu -68 234 199 4052 179 26 41 chr10 45896237 45897126 -94419639 - L1MB8 LINE L1 -360 5818 4911 1934 197 34 10 chr10 45897221 45897637 -94419128 - MLT2C2 LTR ERVL -38 426 1 214 338 26 0 chr10 45897639 45897716 -94419049 - MIR SINE MIR -108 154 76 1210 175 149 3 chr10 45897730 45898030 -94418735 + L1MA9 LINE L1 5974 6305 -7 191 298 0 0 chr10 45898773 45898820 -94417945 - MIR SINE MIR -172 90 44 295 243 14 0 chr10 45898932 45899002 -94417763 + MER94 DNA DNA 60 130 -4 592 290 82 36 chr10 45899997 45900328 -94416437 - LTR16A LTR ERVL 0 450 105 434 330 16 20 chr10 45900476 45900696 -94416069 - L1MC4 LINE L1 -556 5610 5389 195 129 0 0 chr10 45900935 45900966 -94415799 + (CATG)n Simple_repeat Simple_repeat 2 32 0 25 51 0 0 chr10 45901123 45901162 -94415603 + AT_rich Low_complexity Low_complexity 1 39 0 267 248 5 17 chr10 45901474 45901577 -94415188 - L1ME LINE L1 -339 5782 5681 29 0 0 0 chr10 45901588 45901617 -94415148 + AT_rich Low_complexity Low_complexity 1 29 0 884 121 40 0 chr10 45901878 45902002 -94414763 + FRAM SINE Alu 24 152 -24 568 211 49 0 chr10 45902971 45903094 -94413671 - MER45A DNA AcHobo -1 177 49 199 313 55 55 chr10 45904142 45904324 -94412441 + MIR SINE MIR 1 182 -80 502 246 70 35 chr10 45910319 45910490 -94406275 - MIR SINE MIR -14 248 72 293 290 32 0 chr10 45911498 45911591 -94405174 + GA-rich Low_complexity Low_complexity 5 100 0 602 214 96 39 chr10 45911670 45911848 -94404917 + MER3 DNA MER1_type 2 189 -20 212 315 0 65 chr10 45912932 45913024 -94403741 + MIR SINE MIR 37 122 -86 528 274 213 7 chr10 45914202 45914479 -94402286 - MER46C DNA MER2_type -4 334 1 29 0 0 0 chr10 45915630 45915659 -94401106 + AT_rich Low_complexity Low_complexity 1 29 0 466 301 77 62 chr10 45915669 45916074 -94400691 - MLT1K LTR MaLR -11 577 167 1947 165 7 7 chr10 45916238 45916547 -94400218 - AluJb SINE Alu -3 309 1 459 325 105 15 chr10 45916551 45916893 -94399872 - L1ME4a LINE L1 -295 5826 5454 362 211 242 0 chr10 45917953 45918081 -94398684 + MER5A DNA MER1_type 6 164 -25 194 286 125 0 chr10 45918152 45918208 -94398557 + L2 LINE L2 3250 3312 -1 294 169 34 34 chr10 45920767 45920856 -94395909 + LTR16A1 LTR ERVL 336 424 -33 25 0 0 0 chr10 45921843 45921868 -94394897 + AT_rich Low_complexity Low_complexity 1 25 0 261 330 80 0 chr10 45923133 45923233 -94393532 - MIR SINE MIR -86 176 69 273 229 180 10 chr10 45924350 45924446 -94392319 - MIR SINE MIR -63 145 54 180 296 42 0 chr10 45925538 45925609 -94391156 - MIR SINE MIR -71 191 118 186 167 0 0 chr10 45926809 45926845 -94389920 - MIR SINE MIR -65 197 162 214 231 37 9 chr10 45927845 45927953 -94388812 + CT-rich Low_complexity Low_complexity 4 114 0 610 303 153 10 chr10 45928204 45928715 -94388050 + L2 LINE L2 2718 3307 -6 506 317 69 15 chr10 45928997 45929199 -94387566 - MIR SINE MIR -30 232 20 491 238 94 25 chr10 45929785 45929945 -94386820 + MIR SINE MIR 73 243 -19 300 330 10 10 chr10 45930330 45930433 -94386332 + L1ME LINE L1 5333 5435 -686 327 219 45 62 chr10 45930564 45930742 -94386023 + L1ME4a LINE L1 5938 6112 -9 280 183 39 10 chr10 45930742 45930846 -94385919 + CT-rich Low_complexity Low_complexity 1 107 0 456 281 143 18 chr10 45931623 45931840 -94384925 - MIR SINE MIR -17 245 2 338 282 15 38 chr10 45932195 45932326 -94384439 - MIR3 SINE MIR -47 161 34 246 224 0 45 chr10 45932514 45932581 -94384184 + MIR3 SINE MIR 114 177 -31 310 335 26 19 chr10 45932857 45933012 -94383753 - MIR SINE MIR -21 241 86 188 278 153 0 chr10 45933217 45933289 -94383476 - MIR SINE MIR -149 113 31 22 0 0 0 chr10 45934590 45934612 -94382153 + GC_rich Low_complexity Low_complexity 1 22 0 1860 169 92 20 chr10 45935425 45935880 -94380885 + Charlie4a DNA MER1_type 21 508 0 283 253 24 12 chr10 45936381 45936464 -94380301 + C-rich Low_complexity Low_complexity 6 89 0 206 317 12 12 chr10 45937509 45937591 -94379174 + MIR3 SINE MIR 75 156 -52 426 244 31 47 chr10 45937679 45937806 -94378959 + MIR SINE MIR 31 155 -107 195 129 0 0 chr10 45938022 45938053 -94378712 + (A)n Simple_repeat Simple_repeat 1 31 0 420 20 0 0 chr10 45938821 45938870 -94377895 + (TG)n Simple_repeat Simple_repeat 1 49 0 240 35 0 0 chr10 45938869 45938898 -94377867 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 250 262 121 35 chr10 45939254 45939395 -94377370 + LTR16A1 LTR ERVL 52 204 -253 977 134 82 141 chr10 45940248 45940553 -94376212 + LTR12 LTR ERV1 1 287 -427 279 274 12 0 chr10 45940553 45940637 -94376128 + LTR30 LTR ERV1 559 643 -79 617 154 14 13 chr10 45940637 45940754 -94376011 + LTR12 LTR ERV1 301 714 0 3099 290 48 69 chr10 45940784 45942691 -94374074 + HERVL LTR ERVL 873 2835 -2161 2569 139 29 10 chr10 45942716 45943127 -94373638 - MSTB LTR MaLR 0 426 8 1495 346 68 32 chr10 45943154 45944714 -94372051 + HERVL LTR ERVL 2896 4545 -940 671 238 64 20 chr10 45944833 45945035 -94371730 + HERVL LTR ERVL 4741 4951 -813 641 297 36 48 chr10 45945573 45945991 -94370774 + LTR16A LTR ERVL 21 433 -17 716 206 199 21 chr10 45946087 45946373 -94370392 - MER113 DNA MER1_type? -154 367 31 1406 251 119 31 chr10 45946678 45947267 -94369498 + MLT1E1 LTR MaLR 8 648 -6 342 221 16 8 chr10 45948202 45948324 -94368441 + GA-rich Low_complexity Low_complexity 2 124 0 570 226 168 26 chr10 45948357 45948583 -94368182 - MLT1E LTR MaLR -22 571 314 906 195 29 6 chr10 45949944 45950118 -94366647 - AluJo SINE Alu -128 184 7 1137 118 19 6 chr10 45950136 45950297 -94366468 - AluSg/x SINE Alu -13 299 137 1175 212 63 0 chr10 45950303 45950558 -94366207 - L1M4c LINE L1 -4814 1570 1300 1565 113 8 179 chr10 45950559 45950922 -94365843 + AluJo SINE Alu 1 301 -1 769 181 91 101 chr10 45950934 45951140 -94365625 + L1M4 LINE L1 5060 5264 -882 662 227 0 0 chr10 45951140 45951259 -94365506 - FLAM_A SINE Alu -14 119 1 769 181 91 101 chr10 45951259 45951339 -94365426 + L1M4 LINE L1 5264 5343 -803 302 148 49 123 chr10 45951347 45951469 -94365296 + HAL1 LINE L1 2359 2471 -36 999 192 56 0 chr10 45951477 45951675 -94365090 + MER20 DNA MER1_type 6 214 -5 2167 139 0 0 chr10 45951694 45951996 -94364769 + AluSx SINE Alu 1 302 -10 275 115 39 0 chr10 45952099 45952151 -94364614 + CT-rich Low_complexity Low_complexity 3 56 0 1110 109 39 0 chr10 45952153 45952309 -94364456 - AluSp SINE Alu -3 310 149 2326 96 13 0 chr10 45952969 45953271 -94363494 + AluSg SINE Alu 1 306 -4 1003 195 13 61 chr10 45953952 45954183 -94362582 + AluJo SINE Alu 1 220 -92 1797 209 16 14 chr10 45956667 45957035 -94359730 + L1MA8 LINE L1 5809 6177 -114 2686 39 0 0 chr10 45957199 45957506 -94359259 + AluY SINE Alu 1 307 -4 628 102 56 0 chr10 45957872 45957980 -94358785 + L1MA8 LINE L1 6178 6291 0 2550 57 0 22 chr10 45958463 45958779 -94357986 - AluY SINE Alu -2 309 1 2304 108 0 9 chr10 45959867 45960182 -94356583 - AluSq SINE Alu -1 312 1 569 221 8 0 chr10 45960385 45960507 -94356258 + L1M4 LINE L1 3568 3690 -2456 * 658 168 134 45 chr10 45960499 45960678 -94356087 + L1M4 LINE L1 4368 4562 -1584 1409 200 44 19 chr10 45960678 45960948 -94355817 + AluJb SINE Alu 1 277 -35 415 167 89 0 chr10 45960964 45961029 -94355736 + L1M4 LINE L1 4549 4626 -1520 201 39 0 0 chr10 45961029 45961055 -94355710 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 415 167 89 0 chr10 45961055 45961079 -94355686 + L1M4 LINE L1 4626 4646 -1500 1451 217 30 30 chr10 45961819 45962123 -94354642 - AluJb SINE Alu -6 306 3 2062 137 43 0 chr10 45962574 45962873 -94353892 + AluSx SINE Alu 1 312 0 182 244 293 16 chr10 45963091 45963214 -94353551 - MIR SINE MIR -56 206 50 1181 143 0 0 chr10 45963492 45963660 -94353105 - AluSg/x SINE Alu -13 299 132 2507 80 0 0 chr10 45963672 45963973 -94352792 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 45965685 45965722 -94351043 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr10 45965795 45965821 -94350944 + AT_rich Low_complexity Low_complexity 1 26 0 2396 189 19 2 chr10 45965891 45966352 -94350413 - L1PA16 LINE L1 -10 6858 6390 11640 247 22 18 chr10 45966352 45970525 -94346240 - L1PA16 LINE L1 -976 5872 1588 1742 229 99 40 chr10 45970525 45971048 -94345717 - MLT2B3 LTR ERVL 0 554 1 11640 247 22 18 chr10 45971048 45971216 -94345549 - L1PA16 LINE L1 -5260 1588 1422 269 335 32 13 chr10 45971489 45971647 -94345118 - L1PA16 LINE L1 -5257 1592 1432 249 328 20 56 chr10 45972067 45972249 -94344516 - L1PA16 LINE L1 -5271 1567 779 783 390 7 16 chr10 45972433 45972879 -94343886 - L1PA16 LINE L1 -6343 495 54 25 31 0 0 chr10 45972983 45973015 -94343750 + AT_rich Low_complexity Low_complexity 1 32 0 2496 67 0 10 chr10 45973049 45973349 -94343416 + AluY SINE Alu 1 297 -14 1854 168 4 0 chr10 45976751 45977031 -94339734 - AluJb SINE Alu -30 282 2 781 272 76 19 chr10 45977995 45978311 -94338454 + L2 LINE L2 2976 3309 -4 694 156 0 16 chr10 45978447 45978575 -94338190 + L1MA7 LINE L1 5989 6114 -177 787 188 15 0 chr10 45978576 45978709 -94338056 + AluJo SINE Alu 2 136 -176 577 182 35 96 chr10 45978710 45978908 -94337857 + L1MA7 LINE L1 6106 6291 0 965 164 6 6 chr10 45978997 45979162 -94337603 + AluJo SINE Alu 129 293 -19 1869 130 91 7 chr10 45980553 45980838 -94335927 + AluSx SINE Alu 1 309 -3 650 164 27 9 chr10 45981300 45981410 -94335355 + FLAM_C SINE Alu 6 117 -26 369 0 0 0 chr10 45981410 45981451 -94335314 + (CA)n Simple_repeat Simple_repeat 2 42 0 2521 89 0 6 chr10 45982672 45982986 -94333779 + AluSx SINE Alu 1 312 0 25 51 0 0 chr10 45983192 45983231 -94333534 + AT_rich Low_complexity Low_complexity 1 39 0 217 250 0 0 chr10 45983902 45983954 -94332811 + L2 LINE L2 2425 2476 -838 336 239 65 11 chr10 45984148 45984240 -94332525 - MER21B LTR ERV1 -58 805 709 587 251 99 0 chr10 45984241 45984432 -94332333 - L2 LINE L2 -892 2422 2213 624 274 165 27 chr10 45984439 45984815 -94331950 - LTR41 LTR ERVL -6 767 340 554 215 194 17 chr10 45984922 45985159 -94331606 - L2 LINE L2 -2427 887 609 1630 151 20 23 chr10 45985639 45985822 -94330943 - AluJo SINE Alu -8 304 121 495 0 0 0 chr10 45985822 45985877 -94330888 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1630 151 20 23 chr10 45985877 45985998 -94330767 - AluJo SINE Alu -191 121 1 248 315 34 0 chr10 45986869 45986958 -94329807 - MIR SINE MIR -93 115 24 206 278 42 14 chr10 45987130 45987202 -94329563 + L2 LINE L2 3240 3313 0 617 210 144 6 chr10 45987604 45987771 -94328994 - MER3 DNA MER1_type 0 209 20 477 294 147 9 chr10 45988598 45988816 -94327949 - MIR SINE MIR -13 249 2 1623 144 42 83 chr10 45989853 45990166 -94326599 - AluJb SINE Alu -12 300 1 280 264 39 23 chr10 45991032 45991161 -94325604 - MIR SINE MIR -36 226 96 2330 97 3 16 chr10 45991387 45991696 -94325069 + AluSp SINE Alu 1 305 -8 1681 155 54 3 chr10 45992071 45992388 -94324377 - L1MA4 LINE L1 0 6300 5968 222 37 0 0 chr10 45992534 45992561 -94324204 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 506 246 72 18 chr10 45992601 45992768 -94323997 - L1MC4a LINE L1 -1884 5924 5749 2338 81 3 13 chr10 45993282 45993589 -94323176 + AluY SINE Alu 1 304 -7 1162 176 40 0 chr10 45994110 45994309 -94322456 - MER58A DNA MER1_type -16 208 2 1709 158 14 4 chr10 45994614 45994924 -94321841 + AluSx SINE Alu 1 313 0 22 35 0 0 chr10 45995413 45995442 -94321323 + AT_rich Low_complexity Low_complexity 1 29 0 1967 147 3 10 chr10 45998630 45998942 -94317823 - AluJo SINE Alu -2 310 1 1162 249 81 8 chr10 45999057 45999451 -94317314 - L1MC4 LINE L1 -799 7243 6821 1615 185 0 14 chr10 46001201 46001493 -94315272 + AluJo SINE Alu 1 288 -24 2124 108 3 3 chr10 46001619 46001907 -94314858 - AluSc SINE Alu -21 288 1 760 183 8 8 chr10 46003179 46003310 -94313455 - FLAM_A SINE Alu -2 131 1 1237 240 83 65 chr10 46003434 46003810 -94312955 - MLT1D LTR MaLR 0 505 116 1535 219 73 6 chr10 46003810 46004152 -94312613 - MLT1A1 LTR MaLR 0 365 1 1237 240 83 65 chr10 46004152 46004271 -94312494 - MLT1D LTR MaLR -389 116 1 22 0 0 0 chr10 46004398 46004420 -94312345 + AT_rich Low_complexity Low_complexity 1 22 0 1950 127 4 0 chr10 46004715 46004990 -94311775 + AluSx SINE Alu 4 279 -33 2418 96 0 0 chr10 46005031 46005333 -94311432 + AluSp SINE Alu 1 302 -11 639 195 0 114 chr10 46005370 46005580 -94311185 + L1M3 LINE L1 5256 5441 -727 374 0 0 21 chr10 46006761 46006808 -94309957 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 0 0 0 chr10 46007435 46007482 -94309283 + (TG)n Simple_repeat Simple_repeat 2 48 0 244 313 35 9 chr10 46007519 46007634 -94309131 - 5S rRNA rRNA -2 119 2 423 303 15 8 chr10 46007897 46008029 -94308736 - L1MC1 LINE L1 0 6333 6201 1545 199 25 39 chr10 46008029 46008390 -94308375 - MER93b LTR ERV1 -17 356 1 1175 176 8 65 chr10 46008411 46008673 -94308092 - AluJb SINE Alu -45 267 21 236 311 120 47 chr10 46008786 46009168 -94307597 - L2 LINE L2 -1863 1451 1042 2371 89 0 16 chr10 46009265 46009581 -94307184 - AluSx SINE Alu -1 311 1 205 333 28 19 chr10 46009595 46009703 -94307062 - L2 LINE L2 -2338 976 868 21 0 0 0 chr10 46011584 46011605 -94305160 + AT_rich Low_complexity Low_complexity 1 21 0 2342 88 3 0 chr10 46011609 46011904 -94304861 + AluY SINE Alu 1 296 -15 259 359 90 14 chr10 46012011 46012301 -94304464 + L2 LINE L2 1532 1843 -1471 223 296 56 0 chr10 46012434 46012505 -94304260 - L2 LINE L2 -43 3229 3155 189 353 37 59 chr10 46013355 46013491 -94303274 + MIR3 SINE MIR 25 157 -51 1989 124 26 20 chr10 46013586 46013892 -94302873 + AluSx SINE Alu 5 312 0 1989 82 123 0 chr10 46013915 46014184 -94302581 + AluSp SINE Alu 1 302 -11 404 194 9 65 chr10 46014189 46014297 -94302468 + L1M4 LINE L1 4282 4383 -1763 247 67 0 0 chr10 46014297 46014348 -94302417 + AluSp/q SINE Alu 256 306 0 1453 142 12 149 chr10 46014394 46014560 -94302205 + THE1B LTR MaLR 1 78 -286 2027 162 0 0 chr10 46014560 46014863 -94301902 - AluSx SINE Alu -9 303 1 1453 142 12 149 chr10 46014863 46015111 -94301654 + THE1B LTR MaLR 78 358 -6 384 276 188 16 chr10 46015147 46015339 -94301426 + MIR SINE MIR 35 259 -3 189 171 0 0 chr10 46016278 46016313 -94300452 + (CTGGGG)n Simple_repeat Simple_repeat 3 37 0 2199 102 0 20 chr10 46017900 46018205 -94298560 + AluSx SINE Alu 1 299 -13 689 184 7 64 chr10 46019130 46019271 -94297494 - FLAM_A SINE Alu 0 133 1 1888 201 58 15 chr10 46020285 46020500 -94296265 - MSTB LTR MaLR -12 414 210 2234 130 0 0 chr10 46020500 46020800 -94295965 - AluSx SINE Alu -12 300 1 1888 201 58 15 chr10 46020800 46020981 -94295784 - MSTB LTR MaLR -216 210 1 2020 138 0 10 chr10 46021272 46021569 -94295196 + AluY SINE Alu 1 294 -17 34 24 0 0 chr10 46021977 46022018 -94294747 + AT_rich Low_complexity Low_complexity 1 41 0 2253 116 3 0 chr10 46022413 46022716 -94294049 + AluSx SINE Alu 1 304 -8 364 181 56 0 chr10 46022884 46022956 -94293809 - HAL1 LINE L1 -335 2172 2097 288 349 29 14 chr10 46023277 46023486 -94293279 - HAL1 LINE L1 -597 1910 1699 255 251 120 34 chr10 46023556 46023731 -94293034 - HAL1 LINE L1 -951 1556 1367 244 262 29 87 chr10 46023750 46024059 -94292706 - HAL1 LINE L1 -1214 1293 1003 273 281 41 33 chr10 46024149 46024270 -94292495 - HAL1 LINE L1 -1765 742 621 347 336 182 32 chr10 46024346 46024780 -94291985 - HAL1 LINE L1 -2005 502 4 1187 167 5 23 chr10 46025024 46025239 -94291526 + AluJo SINE Alu 87 297 -15 3572 209 24 4 chr10 46025351 46025362 -94291403 - L1 LINE L1 -852 5294 5285 2938 105 9 40 chr10 46025362 46025818 -94290947 - L1PB1 LINE L1 -1 6150 5709 3572 209 24 4 chr10 46025818 46026625 -94290140 - L1 LINE L1 -861 5285 4459 3307 194 20 16 chr10 46026626 46026652 -94290113 + L1M4 LINE L1 3762 3786 -2360 2316 84 0 7 chr10 46026652 46026949 -94289816 + AluSg SINE Alu 1 295 -15 3307 194 20 16 chr10 46026949 46027569 -94289196 + L1M4 LINE L1 3786 4414 -1732 180 77 0 0 chr10 46027569 46027595 -94289170 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3307 194 20 16 chr10 46027595 46027644 -94289121 + L1M4 LINE L1 4414 4461 -1685 2198 100 3 7 chr10 46028741 46029040 -94287725 + AluY SINE Alu 1 298 -13 2361 70 40 0 chr10 46029045 46029343 -94287422 + AluY SINE Alu 2 311 0 1487 149 137 57 chr10 46029519 46029552 -94287213 - MLT1A1 LTR MaLR -2 363 334 2147 128 0 0 chr10 46029552 46029849 -94286916 + AluSx SINE Alu 1 297 -15 1487 149 137 57 chr10 46029849 46030151 -94286614 - MLT1A1 LTR MaLR -31 334 1 317 249 65 70 chr10 46030153 46030338 -94286427 + L1M4 LINE L1 5047 5230 -916 377 298 16 0 chr10 46030361 46030482 -94286283 + L1P LINE L1 5305 5427 -729 1059 123 36 78 chr10 46030894 46031060 -94285705 - L1MA4A LINE L1 -4 6299 6143 2060 125 0 69 chr10 46031060 46031395 -94285370 - AluSx SINE Alu 0 312 1 1059 123 36 78 chr10 46031395 46031447 -94285318 - L1MA4A LINE L1 -160 6143 6090 2308 98 0 0 chr10 46031940 46032236 -94284529 - AluY SINE Alu -15 296 1 264 286 57 0 chr10 46034533 46034603 -94282162 - MER91C DNA MER1_type -42 98 25 194 250 97 0 chr10 46035387 46035459 -94281306 + MIR SINE MIR 176 254 -8 25 31 0 0 chr10 46036317 46036349 -94280416 + AT_rich Low_complexity Low_complexity 1 32 0 1162 99 6 12 chr10 46040598 46040770 -94275995 - L1M1 LINE L1 -4716 2849 2679 622 208 138 0 chr10 46040894 46041053 -94275712 + MER53 DNA DNA 7 187 -2 317 373 10 23 chr10 46041088 46041342 -94275423 - LTR16A LTR ERVL -202 248 1 2244 88 57 0 chr10 46041820 46042116 -94274649 + AluSp SINE Alu 1 313 0 2071 150 37 6 chr10 46042770 46043097 -94273668 + MER1B DNA MER1_type 1 337 0 2457 161 35 24 chr10 46043777 46044200 -94272565 - MSTC LTR MaLR 0 428 1 720 237 126 0 chr10 46045397 46045587 -94271178 + MER20 DNA MER1_type 6 219 0 676 265 76 22 chr10 46045650 46045873 -94270892 - MIR SINE MIR 0 262 28 216 0 0 0 chr10 46046018 46046042 -94270723 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 25 0 0 0 chr10 46046129 46046154 -94270611 + AT_rich Low_complexity Low_complexity 1 25 0 42 77 0 0 chr10 46046259 46046350 -94270415 + AT_rich Low_complexity Low_complexity 1 91 0 25 20 0 59 chr10 46046920 46046971 -94269794 + AT_rich Low_complexity Low_complexity 1 48 0 586 350 100 19 chr10 46046996 46047486 -94269279 + L2 LINE L2 2503 3039 -274 252 143 0 0 chr10 46048541 46048583 -94268182 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 21 71 0 0 chr10 46048746 46048788 -94267977 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr10 46049080 46049102 -94267663 + AT_rich Low_complexity Low_complexity 1 22 0 321 276 92 63 chr10 46049571 46050130 -94266635 - L1M4 LINE L1 -2694 3452 2784 229 62 12 86 chr10 46051159 46051240 -94265525 + (TA)n Simple_repeat Simple_repeat 2 76 0 2138 118 3 7 chr10 46051701 46051998 -94264767 + AluSx SINE Alu 1 296 -16 499 275 52 38 chr10 46052250 46052461 -94264304 + L2 LINE L2 3100 3313 0 189 307 10 69 chr10 46052834 46052935 -94263830 - L2 LINE L2 -1 3271 3177 1392 191 109 39 chr10 46053331 46053795 -94262970 + L1MD2 LINE L1 5783 6234 -8 734 263 115 64 chr10 46054204 46054689 -94262076 - L1ME4a LINE L1 -273 5848 5335 7360 200 53 20 chr10 46054764 46055303 -94261462 - L1M4 LINE L1 -400 5784 5264 417 39 0 0 chr10 46055303 46055354 -94261411 + (TA)n Simple_repeat Simple_repeat 1 51 0 7360 200 53 20 chr10 46055354 46055846 -94260919 - L1M4 LINE L1 -920 5264 4790 1928 155 3 7 chr10 46055846 46056149 -94260616 - AluJo SINE Alu -10 302 1 7360 200 53 20 chr10 46056149 46057527 -94259238 - L1M4 LINE L1 -1394 4790 3291 27 19 0 57 chr10 46057534 46057587 -94259178 + AT_rich Low_complexity Low_complexity 1 50 0 437 0 19 0 chr10 46058130 46058183 -94258582 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 2056 148 3 0 chr10 46058961 46059265 -94257500 + AluJb SINE Alu 1 305 -7 532 221 55 8 chr10 46059398 46059525 -94257240 - MIR SINE MIR -56 206 74 195 266 101 83 chr10 46059679 46059788 -94256977 - L3 LINE CR1 -4 1573 1463 269 208 21 73 chr10 46060392 46060488 -94256277 - MIR SINE MIR -90 172 82 234 333 0 0 chr10 46060768 46060828 -94255937 + L1ME3A LINE L1 5507 5566 -2242 2074 125 3 3 chr10 46060853 46061148 -94255617 - AluSc SINE Alu -9 300 6 196 313 16 0 chr10 46061159 46061223 -94255542 - MER5A DNA MER1_type -124 65 1 1900 183 53 15 chr10 46061611 46062009 -94254756 - MER31A LTR ERV1 -72 413 1 438 83 14 0 chr10 46062785 46062857 -94253908 - AluSq SINE Alu -1 311 239 1954 88 4 4 chr10 46062957 46063208 -94253557 - AluSq SINE Alu -62 251 1 1824 125 14 0 chr10 46063817 46064098 -94252667 - AluJb SINE Alu -17 295 11 21 0 0 0 chr10 46065563 46065584 -94251181 + AT_rich Low_complexity Low_complexity 1 21 0 2308 71 17 17 chr10 46066101 46066397 -94250368 + AluY SINE Alu 1 296 -15 1870 157 0 22 chr10 46066895 46067214 -94249551 - AluSx SINE Alu 0 312 1 184 29 29 29 chr10 46067225 46067259 -94249506 + (TTTTG)n Simple_repeat Simple_repeat 5 38 0 1593 172 3 24 chr10 46067262 46067552 -94249213 - AluJb SINE Alu -28 284 1 1932 248 43 11 chr10 46067552 46067786 -94248979 - L1M4 LINE L1 -3363 2783 2558 1474 179 0 4 chr10 46067786 46068037 -94248728 + AluJb SINE Alu 1 250 -62 1932 248 43 11 chr10 46068037 46068363 -94248402 - L1M4 LINE L1 -3588 2558 2205 556 258 160 104 chr10 46068993 46069657 -94247108 - MER21B LTR ERV1 -160 703 3 277 277 62 27 chr10 46069673 46069846 -94246919 + L2 LINE L2 2743 2932 -340 499 259 44 0 chr10 46070418 46070553 -94246212 + L1ME3A LINE L1 6026 6166 -4 629 258 184 37 chr10 46070968 46071398 -94245367 - MLT1G1 LTR MaLR -19 576 84 1146 152 18 41 chr10 46072153 46072468 -94244297 + THE1C LTR MaLR 1 364 0 1994 150 0 0 chr10 46072651 46072944 -94243821 - AluSx SINE Alu -19 293 1 253 194 11 118 chr10 46072999 46073056 -94243709 - MER94 DNA DNA -28 106 61 925 206 110 129 chr10 46073056 46073567 -94243198 + MLT1D LTR MaLR 5 505 0 253 194 11 118 chr10 46073567 46073602 -94243163 - MER94 DNA DNA -73 61 24 6782 148 71 5 chr10 46074648 46075793 -94240972 + Tigger3b DNA MER2_type 1 1224 -1804 2247 131 48 31 chr10 46075793 46076151 -94240614 - THE1B LTR MaLR 0 364 1 859 246 63 22 chr10 46076160 46076428 -94240337 - L1ME2 LINE L1 -262 5971 5693 6893 129 11 6 chr10 46076433 46077594 -94239171 - L1MA3 LINE L1 0 6305 5135 840 252 90 9 chr10 46077575 46077859 -94238906 - L1ME2 LINE L1 -529 5704 5390 * 320 318 28 9 chr10 46078870 46078977 -94237788 + MIR SINE MIR 36 144 -118 183 80 0 0 chr10 46079379 46079404 -94237361 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 549 280 33 11 chr10 46079686 46079868 -94236897 + MIR SINE MIR 22 207 -55 2183 120 3 3 chr10 46080255 46080556 -94236209 - AluSx SINE Alu -11 301 1 4464 244 44 60 chr10 46080556 46082216 -94234549 - L1ME2 LINE L1 -2418 3797 2164 1066 215 85 0 chr10 46082316 46082586 -94234179 - L1ME2 LINE L1 -4336 2060 1768 666 272 161 0 chr10 46082603 46082827 -94233938 - ERVL-B1 LTR ERVL -5429 335 76 24 32 0 0 chr10 46082852 46082883 -94233882 + AT_rich Low_complexity Low_complexity 1 31 0 252 0 0 0 chr10 46082898 46082926 -94233839 + (TG)n Simple_repeat Simple_repeat 2 29 0 636 237 137 72 chr10 46082927 46083205 -94233560 - MLT2B1 LTR ERVL -74 446 151 1373 311 55 24 chr10 46083215 46084169 -94232596 - L1ME2 LINE L1 -4961 1435 453 1627 131 139 74 chr10 46084222 46084574 -94232191 - THE1C LTR MaLR 0 375 1 534 92 13 0 chr10 46084611 46084687 -94232078 - MSTD LTR MaLR -319 77 1 1131 97 0 0 chr10 46085055 46085200 -94231565 + AluSg SINE Alu 1 145 -165 1532 194 85 10 chr10 46085311 46085700 -94231065 + MER31A LTR ERV1 64 661 0 356 214 36 0 chr10 46085946 46086030 -94230735 + LTR67 LTR ERVL 458 544 -13 337 208 217 42 chr10 46086065 46086185 -94230580 + L2 LINE L2 3167 3307 -6 285 186 14 29 chr10 46086624 46086694 -94230071 - MLT1L LTR MaLR -535 80 12 239 368 94 5 chr10 46086726 46086927 -94229838 - L2 LINE L2 -218 3054 2836 30 0 0 0 chr10 46088244 46088274 -94228491 + GC_rich Low_complexity Low_complexity 1 30 0 677 246 84 14 chr10 46088543 46088758 -94228007 + L1ME1 LINE L1 5748 5977 -187 228 116 0 0 chr10 46088759 46088802 -94227963 + MADE1 DNA Mariner 1 43 -37 451 225 39 34 chr10 46088830 46089008 -94227757 + L1ME1 LINE L1 5985 6163 -3 245 263 0 0 chr10 46089009 46089066 -94227699 - L1MC/D LINE L1 -2065 5720 5664 1350 200 34 83 chr10 46089208 46089593 -94227172 - MLT1E2 LTR MaLR -260 366 1 3710 218 54 33 chr10 46089601 46091782 -94224983 - L1M4c LINE L1 -3427 3217 893 3412 231 26 31 chr10 46091883 46092696 -94224069 - L1M4c LINE L1 -5463 1079 271 297 0 0 0 chr10 46092723 46092756 -94224009 + (TG)n Simple_repeat Simple_repeat 2 34 0 717 193 0 17 chr10 46092756 46092875 -94223890 - FLAM_C SINE Alu -26 117 1 1103 234 21 4 chr10 46092883 46093122 -94223643 - L1M4c LINE L1 -6286 256 14 412 271 127 51 chr10 46093560 46093796 -94222969 - MIR SINE MIR -7 255 2 370 350 21 10 chr10 46093945 46094139 -94222626 - MER117 DNA MER1_type 0 197 2 2311 255 30 3 chr10 46094397 46095064 -94221701 + L1 LINE L1 2634 3318 -2828 236 288 136 34 chr10 46095069 46095187 -94221578 - MIR SINE MIR -123 139 10 992 194 19 34 chr10 46095191 46095473 -94221292 + L1P LINE L1 3313 3589 -2557 299 260 33 3 chr10 46096707 46096806 -94219959 - MIR SINE MIR -85 123 16 1025 186 76 21 chr10 46098331 46098567 -94218198 - MER33 DNA MER1_type -71 253 5 21 0 0 0 chr10 46098886 46098907 -94217858 + AT_rich Low_complexity Low_complexity 1 21 0 3882 153 50 8 chr10 46099032 46099694 -94217071 - L1MC1 LINE L1 -67 6266 5577 58 47 0 0 chr10 46100652 46100738 -94216027 + AT_rich Low_complexity Low_complexity 1 86 0 237 132 0 0 chr10 46100854 46100892 -94215873 + (TC)n Simple_repeat Simple_repeat 2 39 0 244 211 66 40 chr10 46100973 46101049 -94215716 + MIR SINE MIR 109 186 -76 236 280 80 24 chr10 46101032 46101157 -94215608 - L2 LINE L2 -5 3267 3136 * 580 291 45 10 chr10 46101747 46101946 -94214819 - MIR SINE MIR -55 207 2 183 80 0 0 chr10 46102212 46102237 -94214528 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 353 310 35 9 chr10 46102631 46102747 -94214018 - MIR SINE MIR -108 154 36 235 295 39 0 chr10 46103456 46103534 -94213231 + MIR SINE MIR 116 196 -66 524 341 14 27 chr10 46104247 46104687 -94212078 + HAL1 LINE L1 833 1266 -1241 906 304 90 24 chr10 46104696 46105149 -94211616 - LTR33 LTR ERVL -2 519 13 216 0 0 0 chr10 46105278 46105302 -94211463 + (A)n Simple_repeat Simple_repeat 1 24 0 402 272 69 78 chr10 46105302 46105583 -94211182 + HAL1 LINE L1 1427 1706 -801 1776 138 95 20 chr10 46105583 46105932 -94210833 - THE1C LTR MaLR 0 375 1 402 272 69 78 chr10 46105932 46106010 -94210755 + HAL1 LINE L1 1706 1783 -724 1410 305 35 35 chr10 46106011 46106546 -94210219 + ERVL LTR ERVL 2271 2805 -2959 1517 245 114 5 chr10 46106904 46107858 -94208907 + L1MC3 LINE L1 6493 7541 -244 189 138 0 0 chr10 46108300 46108329 -94208436 + MIR SINE MIR 117 145 -117 253 191 30 12 chr10 46109695 46109775 -94206990 - MLT1I LTR MaLR -266 143 94 270 0 0 0 chr10 46110207 46110237 -94206528 + (TG)n Simple_repeat Simple_repeat 2 31 0 2048 127 0 3 chr10 46110361 46110660 -94206105 + AluSx SINE Alu 1 298 -14 2464 131 15 10 chr10 46110661 46111059 -94205706 + MER57A LTR ERV1 4 403 0 10023 123 14 22 chr10 46111059 46111463 -94205302 + MER57A-int LTR ERV1 1 407 -7130 2276 84 10 3 chr10 46111463 46111773 -94204992 - AluSq SINE Alu -1 312 1 10023 123 14 22 chr10 46111773 46111881 -94204884 + MER57A-int LTR ERV1 407 514 -7023 2374 56 3 7 chr10 46111881 46112184 -94204581 - AluY SINE Alu -9 302 1 10023 123 14 22 chr10 46112184 46113228 -94203537 + MER57A-int LTR ERV1 514 1546 -5991 * 20035 102 36 24 chr10 46113222 46114932 -94201833 + MER57A-int LTR ERV1 1939 3707 -3830 2059 131 3 0 chr10 46114932 46115237 -94201528 + AluSx SINE Alu 1 306 -6 20035 102 36 24 chr10 46115237 46116620 -94200145 + MER57A-int LTR ERV1 3707 5071 -2466 2263 202 60 78 chr10 46116615 46117873 -94198892 + MER31-int LTR ERV1 1534 2506 -2365 * 260 167 0 0 chr10 46118004 46118052 -94198713 + MER31-int LTR ERV1 2429 2476 -4282 753 172 10 81 chr10 46118136 46118345 -94198420 + MER31-int LTR ERV1 3536 3729 -2869 1472 195 89 109 chr10 46118429 46119453 -94197312 + MER31-int LTR ERV1 2477 4766 -1565 1904 85 35 0 chr10 46119461 46119719 -94197046 + AluY SINE Alu 1 267 -44 991 150 0 0 chr10 46119725 46119872 -94196893 + AluSg/x SINE Alu 143 289 -21 1009 176 61 33 chr10 46119877 46120122 -94196643 + MER31-int LTR ERV1 3477 3728 -1208 908 125 0 28 chr10 46120123 46120267 -94196498 + AluSq/x SINE Alu 1 140 -172 184 347 87 36 chr10 46120879 46121075 -94195690 - L2 LINE L2 -254 3059 2854 2555 109 22 6 chr10 46121143 46121501 -94195264 - THE1B LTR MaLR 0 364 1 1207 212 8 10 chr10 46121633 46121959 -94194806 + MLT1A1 LTR MaLR 1 363 -2 1811 123 56 0 chr10 46124323 46124607 -94192158 - AluSx SINE Alu -12 300 1 309 169 0 0 chr10 46125032 46125091 -94191674 + CT-rich Low_complexity Low_complexity 2 60 0 2088 106 7 3 chr10 46125126 46125429 -94191336 - AluSg SINE Alu -6 304 1 1391 115 5 0 chr10 46126653 46126853 -94189912 - AluSq SINE Alu -10 303 103 4609 92 1 63 chr10 46127776 46128502 -94188263 + L1PA13 LINE L1 5482 6162 -1 35 54 0 0 chr10 46128502 46128558 -94188207 + AT_rich Low_complexity Low_complexity 1 56 0 252 385 0 0 chr10 46128558 46128662 -94188103 - MIR3 SINE MIR -7 201 98 3893 152 49 12 chr10 46129518 46130195 -94186570 + L1MC1 LINE L1 5577 6278 -55 21 0 0 0 chr10 46130307 46130328 -94186437 + AT_rich Low_complexity Low_complexity 1 21 0 235 224 0 0 chr10 46130665 46130714 -94186051 + L1MC1 LINE L1 6270 6318 -15 1013 191 76 21 chr10 46130717 46130953 -94185812 - MER33 DNA MER1_type -71 253 5 21 0 0 0 chr10 46131272 46131293 -94185472 + AT_rich Low_complexity Low_complexity 1 21 0 877 225 42 43 chr10 46133014 46133431 -94183334 - MLT1A1 LTR MaLR -2 363 1 2318 171 10 76 chr10 46133660 46134158 -94182607 - MLT1C LTR MaLR -2 465 1 260 340 13 20 chr10 46134520 46134673 -94182092 + LTR16C LTR ERVL 336 487 -4 187 319 59 42 chr10 46134705 46134824 -94181941 + L2 LINE L2 2715 2835 -479 238 344 240 10 chr10 46134840 46135032 -94181733 + MIR SINE MIR 25 260 -2 2233 298 137 14 chr10 46135196 46135443 -94181322 - L2 LINE L2 0 3313 3098 1698 175 0 14 chr10 46135443 46135735 -94181030 - AluJb SINE Alu -24 288 1 2233 298 137 14 chr10 46135735 46136784 -94179981 - L2 LINE L2 -215 3098 1853 787 154 23 0 chr10 46136819 46136949 -94179816 + FLAM_C SINE Alu 1 133 0 1041 169 4 94 chr10 46136956 46137210 -94179555 + AluJo SINE Alu 82 312 0 232 160 20 20 chr10 46137211 46137261 -94179504 - L2 LINE L2 -1514 1800 1751 300 163 0 0 chr10 46137489 46137538 -94179227 + MIR SINE MIR 63 111 -151 295 156 0 0 chr10 46138004 46138049 -94178716 + L2 LINE L2 3223 3267 -5 434 191 103 40 chr10 46138356 46138482 -94178283 - MER94 DNA DNA 0 134 1 673 234 79 131 chr10 46138635 46139307 -94177458 + L1ME4a LINE L1 5485 6121 0 255 272 43 11 chr10 46139592 46139618 -94177147 + L1ME LINE L1 5803 5827 -294 2027 103 3 35 chr10 46139618 46139930 -94176835 + AluSq SINE Alu 1 302 -11 255 272 43 11 chr10 46139930 46139995 -94176770 + L1ME LINE L1 5827 5897 -224 341 231 205 8 chr10 46140231 46140364 -94176401 - MER5A DNA MER1_type 0 189 20 1778 202 31 59 chr10 46140602 46141058 -94175707 + LTR47B LTR ERVL 1 443 0 679 298 93 0 chr10 46144197 46144402 -94172363 - MIR SINE MIR -21 241 18 220 299 15 0 chr10 46144860 46144927 -94171838 + L2 LINE L2 2902 2969 -303 572 301 16 16 chr10 46145090 46145276 -94171489 - MER5A DNA MER1_type -2 187 2 1535 138 0 0 chr10 46145473 46145705 -94171060 + AluSg/x SINE Alu 65 296 -16 276 305 102 64 chr10 46146100 46146520 -94170245 - L2 LINE L2 -5 3267 2826 1339 107 51 5 chr10 46197442 46197639 -94119126 + THE1A LTR MaLR 150 355 0 2542 123 35 14 chr10 46197639 46198061 -94118704 + THE1A-int LTR MaLR 1 431 -1149 183 244 51 64 chr10 46198852 46198930 -94117835 - L2 LINE L2 -18 3295 3219 2135 120 0 7 chr10 46199004 46199303 -94117462 - AluY SINE Alu -14 297 1 1703 173 79 26 chr10 46200389 46200731 -94116034 - THE1B LTR MaLR 0 364 5 2498 224 38 0 chr10 46201078 46201582 -94115183 - L1PA13 LINE L1 -6264 523 1 1684 240 53 7 chr10 46201595 46202157 -94114608 + L1 LINE L1 4222 4809 -1337 490 100 14 0 chr10 46202293 46202363 -94114402 - AluS SINE Alu -240 72 2 227 316 92 0 chr10 46202688 46202764 -94114001 - MIR SINE MIR -68 194 112 4725 81 24 30 chr10 46203781 46204519 -94112246 + L1PB1 LINE L1 5415 6148 -3 33 0 0 0 chr10 46204521 46204554 -94112211 + AT_rich Low_complexity Low_complexity 1 33 0 951 133 6 16 chr10 46204799 46205118 -94111647 + (TGGA)n Simple_repeat Simple_repeat 1 316 0 1261 229 38 35 chr10 46206613 46206984 -94109781 + MLT1A2 LTR MaLR 3 374 0 3570 230 130 15 chr10 46209750 46210807 -94105958 - MER69B DNA AcHobo -48 1178 1 1778 147 21 4 chr10 46211421 46211700 -94105065 + AluJo SINE Alu 6 289 -23 346 306 0 0 chr10 46212571 46212679 -94104086 + MIR SINE MIR 124 231 -31 910 296 53 17 chr10 46213476 46213831 -94102934 + L1ME4a LINE L1 5539 5906 -215 327 236 97 0 chr10 46213834 46213906 -94102859 + MER3 DNA MER1_type 2 80 -129 2554 150 8 0 chr10 46213917 46214311 -94102454 - MER101 LTR ERV1 -2 472 76 486 60 24 12 chr10 46214311 46214395 -94102370 + (TTTA)n Simple_repeat Simple_repeat 4 88 0 490 253 213 46 chr10 46214422 46214746 -94102019 - MLT1J2 LTR MaLR -28 422 45 1960 124 29 10 chr10 46215271 46215585 -94101180 - L1PA16 LINE L1 -9 6157 5838 2086 165 0 15 chr10 46215585 46215979 -94100786 + L1 LINE L1 4300 4687 -1459 630 88 0 0 chr10 46215979 46216059 -94100706 - MER101 LTR ERV1 -394 80 1 482 187 57 49 chr10 46216059 46216182 -94100583 + MER3 DNA MER1_type 86 209 0 294 254 78 49 chr10 46216232 46216374 -94100391 + L1ME4a LINE L1 5964 6109 -12 206 338 115 7 chr10 46216564 46216703 -94100062 - MIR SINE MIR -86 176 23 460 258 155 0 chr10 46216859 46217014 -94099751 + MER5A DNA MER1_type 10 188 -1 279 215 0 0 chr10 46217056 46217121 -94099644 + MIR SINE MIR 69 133 -75 211 320 78 51 chr10 46218097 46218428 -94098337 + L2 LINE L2 2633 2972 -342 5637 40 0 22 chr10 46219415 46220142 -94096623 - L1PA4 LINE L1 -49 6106 5396 608 126 0 130 chr10 46221953 46222207 -94094558 - AluSq SINE Alu -1 312 92 206 253 27 20 chr10 46222639 46222727 -94094038 + CT-rich Low_complexity Low_complexity 1 151 0 431 171 184 19 chr10 46223312 46223470 -94093295 - MLT1B LTR MaLR -206 184 1 616 276 105 109 chr10 46223630 46224144 -94092621 + MLT1K LTR MaLR 74 585 -3 194 203 0 34 chr10 46224456 46224515 -94092250 - L3 LINE CR1 -354 1223 1167 3744 220 62 49 chr10 46225505 46226511 -94090254 - MER45R DNA AcHobo -562 1019 1 1741 150 7 34 chr10 46228212 46228505 -94088260 - AluJb SINE Alu -27 285 1 1599 199 52 33 chr10 46229525 46229701 -94087064 + MLT1A2 LTR MaLR 1 172 -202 543 56 0 0 chr10 46229701 46229772 -94086993 + (TC)n Simple_repeat Simple_repeat 1 71 0 1599 199 52 33 chr10 46229772 46229962 -94086803 + MLT1A2 LTR MaLR 172 374 0 295 256 0 35 chr10 46230155 46230241 -94086524 + MER5B DNA MER1_type 1 83 -95 189 0 0 0 chr10 46230282 46230303 -94086462 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2165 117 0 0 chr10 46230305 46230587 -94086178 - AluSg SINE Alu -28 282 1 802 211 57 17 chr10 46230670 46230845 -94085920 - MER5A DNA MER1_type -4 185 4 605 298 170 50 chr10 46232521 46233346 -94083419 + L2 LINE L2 2018 2941 -373 180 271 0 0 chr10 46233567 46233615 -94083150 + L2 LINE L2 3265 3312 -1 445 241 68 25 chr10 46233813 46233975 -94082790 - L1ME4a LINE L1 -2 6119 5951 38 39 0 39 chr10 46234701 46234779 -94081986 + GC_rich Low_complexity Low_complexity 1 75 0 507 266 59 24 chr10 46236332 46236501 -94080264 - MER46C DNA MER2_type -1 337 163 2350 83 0 3 chr10 46236507 46236796 -94079969 + AluSx SINE Alu 1 288 -24 506 245 62 31 chr10 46236808 46237000 -94079765 - MER46C DNA MER2_type -130 208 11 180 0 0 0 chr10 46238007 46238027 -94078738 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 46238263 46238291 -94078474 + AT_rich Low_complexity Low_complexity 1 28 0 255 217 217 0 chr10 46238422 46238505 -94078260 + L2 LINE L2 3193 3293 -20 21 36 0 0 chr10 46238714 46238742 -94078023 + AT_rich Low_complexity Low_complexity 1 28 0 234 250 0 0 chr10 46238754 46238810 -94077955 + (TG)n Simple_repeat Simple_repeat 2 57 0 795 149 65 6 chr10 46239369 46239537 -94077228 - L1MB7 LINE L1 0 6184 6007 291 114 0 0 chr10 46240931 46240975 -94075790 + (TG)n Simple_repeat Simple_repeat 1 44 0 493 270 70 20 chr10 46241153 46241353 -94075412 + MIR SINE MIR 11 220 -42 24 67 0 0 chr10 46242582 46242627 -94074138 + AT_rich Low_complexity Low_complexity 1 45 0 23 86 0 0 chr10 46242686 46242744 -94074021 + AT_rich Low_complexity Low_complexity 1 58 0 410 238 116 43 chr10 46242895 46243059 -94073706 + L1ME3 LINE L1 5987 6162 0 889 236 98 39 chr10 46243626 46243883 -94072882 + L1MC4a LINE L1 5512 5797 -2011 1430 211 72 36 chr10 46243883 46244244 -94072521 + MLT1A2 LTR MaLR 1 374 0 889 236 98 39 chr10 46244244 46244342 -94072423 + L1MC4a LINE L1 5797 5888 -1920 332 267 20 10 chr10 46245879 46245980 -94070785 - MER5A DNA MER1_type -25 164 63 328 304 30 15 chr10 46245885 46246020 -94070745 + MER5A DNA MER1_type 43 179 -10 * 1887 175 17 9 chr10 46247012 46247627 -94069138 - L1P4 LINE L1 -635 5526 4908 1170 231 61 14 chr10 46248204 46248481 -94068284 - MLT-int LTR MaLR -943 792 503 690 115 0 0 chr10 46248508 46248604 -94068161 + MER85 DNA T2_type 44 139 0 1503 197 23 70 chr10 46248608 46249140 -94067625 - MLT-int LTR MaLR -1212 523 19 205 281 31 0 chr10 46250035 46250099 -94066666 - MIR SINE MIR -102 160 95 202 177 16 16 chr10 46250310 46250372 -94066393 + (TA)n Simple_repeat Simple_repeat 1 62 0 24 0 0 0 chr10 46251477 46251501 -94065264 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 46251753 46251775 -94064990 + AT_rich Low_complexity Low_complexity 1 22 0 439 329 85 50 chr10 46252107 46252587 -94064178 - L2 LINE L2 -1 3312 2816 1203 227 71 44 chr10 46253370 46253735 -94063030 + MLT1B LTR MaLR 16 390 0 670 257 160 30 chr10 46253736 46254137 -94062628 + L1ME1 LINE L1 5681 6133 -33 1927 139 69 8 chr10 46254143 46254511 -94062254 + MER7C DNA MER2_type 1 391 -211 1214 205 40 49 chr10 46254511 46254858 -94061907 - THE1B LTR MaLR 0 364 21 6600 65 10 5 chr10 46255142 46256834 -94059931 + L1PA3 LINE L1 4360 6061 -94 498 238 0 19 chr10 46258745 46258850 -94057915 - MIR SINE MIR -60 202 100 502 203 105 38 chr10 46258893 46259026 -94057739 + MER5A DNA MER1_type 2 143 -46 1514 171 18 32 chr10 46259050 46259330 -94057435 + AluJb SINE Alu 1 276 -36 269 48 48 0 chr10 46259333 46259375 -94057390 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 895 218 95 41 chr10 46259377 46259693 -94057072 - MER63B DNA MER1_type -100 336 4 302 211 18 0 chr10 46259698 46259755 -94057010 + MER5A DNA MER1_type 130 187 -2 202 350 67 17 chr10 46260166 46260286 -94056479 + MIR SINE MIR 93 218 -44 687 253 134 10 chr10 46260966 46261168 -94055597 - MIR SINE MIR -5 257 31 453 257 20 66 chr10 46261431 46261583 -94055182 - MIR SINE MIR -63 145 1 650 286 74 14 chr10 46262828 46263239 -94053526 - LTR16C LTR ERVL -4 487 4 496 151 12 12 chr10 46264006 46264092 -94052673 - MLT1D LTR MaLR -419 86 1 294 294 80 31 chr10 46264092 46264255 -94052510 - MIR SINE MIR -78 184 14 270 256 34 51 chr10 46264707 46264824 -94051941 - MIR SINE MIR -116 146 32 254 192 154 0 chr10 46266952 46267030 -94049735 - MLT1J2 LTR MaLR 0 450 361 585 229 46 0 chr10 46267161 46267336 -94049429 - MLT1J1 LTR MaLR -261 185 3 357 302 61 68 chr10 46267361 46267656 -94049109 - L2 LINE L2 -77 3195 2903 302 236 0 14 chr10 46267787 46267859 -94048906 - MER5A DNA MER1_type 0 189 119 299 350 70 0 chr10 46268658 46268815 -94047950 - MIR SINE MIR -75 187 20 334 297 72 7 chr10 46270672 46270823 -94045942 + MIR SINE MIR 37 192 -51 322 333 16 8 chr10 46271688 46271814 -94044951 + MIR3 SINE MIR 50 176 -32 296 187 0 40 chr10 46272446 46272521 -94044244 - Charlie5 DNA MER1_type 0 2624 2553 1065 161 69 97 chr10 46272567 46272821 -94043944 - Charlie5 DNA MER1_type -40 2584 2341 1264 102 46 0 chr10 46272821 46273018 -94043747 - L1MA5A LINE L1 -3 6294 6089 1065 161 69 97 chr10 46273018 46273124 -94043641 - Charlie5 DNA MER1_type -283 2341 2234 470 212 34 0 chr10 46273127 46273245 -94043520 - MER3 DNA MER1_type -47 162 41 220 175 35 35 chr10 46273280 46273337 -94043428 + GA-rich Low_complexity Low_complexity 3 59 0 341 353 53 29 chr10 46273351 46273558 -94043207 + MIR SINE MIR 13 224 -38 2314 94 10 7 chr10 46273578 46273877 -94042888 - AluSx SINE Alu -12 300 1 413 273 230 0 chr10 46274002 46274141 -94042624 - MER5A DNA MER1_type -2 187 17 474 212 73 22 chr10 46274145 46274282 -94042483 + MER45 DNA AcHobo 1438 1581 0 1611 229 64 131 chr10 46274567 46275431 -94041334 - MER45C DNA AcHobo -147 806 1 195 241 74 19 chr10 46275598 46275652 -94041113 - MIR SINE MIR -62 146 90 466 196 10 0 chr10 46276592 46276689 -94040076 + MER5A DNA MER1_type 15 112 -77 265 323 0 0 chr10 46277033 46277098 -94039667 + Charlie8 DNA MER1_type 14 78 -2339 2085 90 22 0 chr10 46277186 46277454 -94039311 + AluSp SINE Alu 1 274 -39 371 338 32 7 chr10 46277616 46277770 -94038995 + MIR SINE MIR 15 172 -90 29 70 0 0 chr10 46277813 46277870 -94038895 + AT_rich Low_complexity Low_complexity 1 57 0 2824 7 0 0 chr10 46278126 46278425 -94038340 + AluYa5 SINE Alu 1 299 -12 1145 198 75 39 chr10 46279348 46279707 -94037058 + MLT1C LTR MaLR 95 466 -1 238 143 0 0 chr10 46280146 46280181 -94036584 + L2 LINE L2 3262 3296 -17 385 330 116 5 chr10 46280877 46281101 -94035664 + MER112 DNA MER1_type 1 249 -11 514 270 116 74 chr10 46282088 46282492 -94034273 + MLT1J2 LTR MaLR 27 447 -3 262 206 140 47 chr10 46282492 46282599 -94034166 + MIR SINE MIR 115 231 -31 803 257 92 5 chr10 46282900 46283114 -94033651 + MIR SINE MIR 14 239 -23 1167 193 14 5 chr10 46283922 46284135 -94032630 + MER58A DNA MER1_type 10 224 0 199 147 0 0 chr10 46284814 46284848 -94031917 + L2 LINE L2 3261 3294 -19 3109 40 0 3 chr10 46284857 46285230 -94031535 + L1PA5 LINE L1 5783 6154 0 435 329 18 24 chr10 46285472 46285639 -94031126 + MIR SINE MIR 40 205 -57 676 248 28 106 chr10 46285915 46286169 -94030596 + MIR SINE MIR 7 240 -22 321 232 0 0 chr10 46286208 46286277 -94030488 - MLT1H1 LTR MaLR 0 555 487 6346 123 2 6 chr10 46286294 46287455 -94029310 - L1PB1 LINE L1 -6 6145 4991 2343 114 0 0 chr10 46287455 46287762 -94029003 - AluSx SINE Alu -5 307 1 6346 123 2 6 chr10 46287762 46287984 -94028781 - L1PB1 LINE L1 -1160 4991 4770 401 219 31 0 chr10 46287984 46288080 -94028685 - MLT1F LTR MaLR -48 547 449 * 478 254 36 96 chr10 46288077 46288380 -94028385 - MLT1F LTR MaLR -199 343 59 224 299 90 28 chr10 46288442 46288653 -94028112 + L2 LINE L2 2564 2787 -527 2424 160 19 32 chr10 46288682 46289114 -94027651 - MSTB LTR MaLR 0 426 1 765 221 2 2 chr10 46290092 46290546 -94026219 + (TCCA)n Simple_repeat Simple_repeat 1 454 0 539 269 86 16 chr10 46290546 46290732 -94026033 + MIR SINE MIR 58 256 -6 200 237 34 34 chr10 46291948 46292007 -94024758 + L2 LINE L2 3247 3305 -8 2056 160 0 0 chr10 46292120 46292426 -94024339 - AluSx SINE Alu -6 306 1 434 325 34 19 chr10 46292430 46292636 -94024129 - L1ME LINE L1 -398 5764 5556 572 242 42 42 chr10 46292687 46292852 -94023913 - MIR SINE MIR -1 261 97 409 236 94 0 chr10 46292887 46292993 -94023772 - MIR SINE MIR -108 154 39 24 0 0 0 chr10 46293332 46293356 -94023409 + GC_rich Low_complexity Low_complexity 1 24 0 26 88 0 0 chr10 46293540 46293608 -94023157 + GC_rich Low_complexity Low_complexity 1 68 0 405 308 35 14 chr10 46294382 46294551 -94022214 + MER5A DNA MER1_type 1 183 -6 202 256 61 12 chr10 46297716 46297798 -94018967 + L2 LINE L2 2603 2688 -626 192 237 13 92 chr10 46298725 46298801 -94017964 + L2 LINE L2 2291 2360 -954 224 249 205 78 chr10 46299202 46299407 -94017358 + L2 LINE L2 3013 3243 -70 236 250 45 57 chr10 46299834 46299922 -94016843 + MIR3 SINE MIR 119 205 -3 1349 199 82 56 chr10 46300440 46300853 -94015912 - L1MB7 LINE L1 -10 6672 6249 1004 193 232 53 chr10 46300854 46301162 -94015603 - L1MB7 LINE L1 -2382 4262 4011 1724 160 21 31 chr10 46301162 46301476 -94015289 - AluJo SINE Alu 0 311 1 1004 193 232 53 chr10 46301476 46301674 -94015091 - L1MB7 LINE L1 -2633 4011 3664 967 157 0 0 chr10 46301676 46301829 -94014936 - FRAM SINE Alu -1 175 23 4674 229 67 27 chr10 46301895 46304638 -94012127 - L1MB7 LINE L1 -3262 3382 382 310 300 0 33 chr10 46304689 46304779 -94011986 - L1MB7 LINE L1 -6141 401 315 303 283 142 61 chr10 46304950 46305162 -94011603 + MIR SINE MIR 34 262 0 558 258 167 11 chr10 46305246 46305432 -94011333 - MIR SINE MIR -28 234 20 181 271 135 42 chr10 46306329 46306425 -94010340 + MIR SINE MIR 23 127 -135 471 305 11 37 chr10 46306800 46306987 -94009778 - MIR3 SINE MIR -24 184 3 328 315 20 55 chr10 46307600 46307746 -94009019 - MIR SINE MIR -53 155 15 266 0 29 0 chr10 46309785 46309819 -94006946 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 1709 206 52 0 chr10 46311203 46311533 -94005232 + MER7A DNA MER2_type 1 345 -1 24 0 0 0 chr10 46312368 46312392 -94004373 + AT_rich Low_complexity Low_complexity 1 24 0 1798 135 4 4 chr10 46312411 46312670 -94004095 + AluSx SINE Alu 47 305 -7 245 345 30 20 chr10 46312827 46313030 -94003735 + L2 LINE L2 2466 2670 -644 243 254 0 0 chr10 46313697 46313752 -94003013 + LTR16A1 LTR ERVL 403 457 0 523 204 53 59 chr10 46314815 46314967 -94001798 + L2 LINE L2 3163 3313 0 269 251 150 43 chr10 46315003 46315210 -94001555 - L2 LINE L2 -218 3054 2826 458 273 250 33 chr10 46315927 46316231 -94000534 - L1MC4a LINE L1 -1953 5855 5486 291 272 92 58 chr10 46316634 46316811 -93999954 - L1MC4a LINE L1 -941 5205 5035 2321 96 0 10 chr10 46316811 46317113 -93999652 - AluSx SINE Alu -13 299 1 291 272 92 58 chr10 46317113 46317302 -93999463 - L1MC4a LINE L1 -1111 5035 4822 1468 214 22 26 chr10 46317350 46317663 -93999102 - AluJo SINE Alu 0 312 1 267 349 73 48 chr10 46317921 46318319 -93998446 - L1MC4a LINE L1 -1826 4320 3913 646 259 27 36 chr10 46321145 46321365 -93995400 + MIR SINE MIR 21 238 -24 1495 266 49 35 chr10 46321547 46322115 -93994650 - MLT1E LTR MaLR -15 578 3 213 122 0 82 chr10 46322129 46322178 -93994587 + MIR SINE MIR 22 66 -196 694 240 33 11 chr10 46322268 46322451 -93994314 + MIR SINE MIR 73 259 -3 456 313 123 41 chr10 46322515 46322931 -93993834 - L2 LINE L2 -19 3294 2845 486 242 0 0 chr10 46323057 46323181 -93993584 + (TGGA)n Simple_repeat Simple_repeat 1 124 0 330 271 48 67 chr10 46323419 46323573 -93993192 + MIR SINE MIR 19 172 -69 422 310 35 0 chr10 46323632 46323748 -93993017 - MIR SINE MIR -70 192 73 837 185 58 19 chr10 46324614 46324818 -93991947 + MER33 DNA MER1_type 4 215 -109 350 43 0 0 chr10 46324818 46324864 -93991901 - MADE1 DNA Mariner 0 80 35 2050 138 24 0 chr10 46324872 46325162 -93991603 + AluSq SINE Alu 1 297 -16 430 227 18 0 chr10 46325176 46325286 -93991479 + MER33 DNA MER1_type 213 324 0 38 22 0 0 chr10 46325423 46325468 -93991297 + AT_rich Low_complexity Low_complexity 1 45 0 340 232 47 69 chr10 46325794 46325962 -93990803 + MIR SINE MIR 3 166 -63 941 272 182 22 chr10 46326208 46326932 -93989833 - L2 LINE L2 -135 3178 2353 226 287 17 70 chr10 46326933 46327048 -93989717 - L2 LINE L2 -1065 2249 2141 930 191 88 25 chr10 46327235 46327439 -93989326 + MER20 DNA MER1_type 1 217 -2 223 299 136 32 chr10 46327465 46327619 -93989146 - MIR SINE MIR 0 262 93 2591 66 0 0 chr10 46327686 46327988 -93988777 + AluY SINE Alu 1 302 -9 438 355 59 0 chr10 46328341 46328527 -93988238 + MIR SINE MIR 47 243 -19 3191 255 70 30 chr10 46328534 46329610 -93987155 + L1ME LINE L1 195 1313 -5250 1495 154 79 25 chr10 46329653 46329932 -93986833 - AluJo SINE Alu -16 296 3 1716 203 19 74 chr10 46329940 46330452 -93986313 - MLT1D LTR MaLR -21 484 1 3418 224 122 84 chr10 46330469 46331118 -93985647 + L1ME LINE L1 1180 1803 -4579 1903 124 4 11 chr10 46331118 46331393 -93985372 + AluSx SINE Alu 40 312 0 3418 224 122 84 chr10 46331393 46332576 -93984189 + L1ME LINE L1 1803 2940 -3442 889 233 64 0 chr10 46332576 46332778 -93983987 + MER58A DNA MER1_type 6 220 -4 3418 224 122 84 chr10 46332778 46333520 -93983245 + L1ME LINE L1 2940 4192 -2190 5881 124 51 14 chr10 46333529 46334341 -93982424 + L1MA4A LINE L1 4845 5719 -584 856 72 96 0 chr10 46334341 46334466 -93982299 + MER85 DNA T2_type 1 137 -2 5881 124 51 14 chr10 46334466 46335071 -93981694 + L1MA4A LINE L1 5719 6300 -3 1132 212 25 7 chr10 46335061 46335335 -93981430 + L1ME LINE L1 4182 4460 -1922 * 1979 211 49 10 chr10 46335360 46336053 -93980712 + L1ME LINE L1 5121 5842 -560 621 184 52 7 chr10 46336138 46336274 -93980491 - MER69 DNA AcHobo -3 2523 2382 744 233 17 68 chr10 46336818 46337090 -93979675 + MIR SINE MIR 2 255 -7 712 314 160 6 chr10 46338509 46338995 -93977770 - L2 LINE L2 -301 3012 2451 1377 295 81 15 chr10 46339654 46340501 -93976264 + L1ME3A LINE L1 5056 5962 -208 389 311 160 5 chr10 46340522 46340734 -93976031 + L1ME3A LINE L1 5923 6167 -3 338 333 9 9 chr10 46340738 46340852 -93975913 - MIR SINE MIR -126 136 23 2311 241 271 17 chr10 46341514 46342821 -93973944 - L2 LINE L2 -31 3241 1596 3156 218 40 36 chr10 46342821 46343692 -93973073 + L1M4 LINE L1 3702 4576 -1570 595 304 52 39 chr10 46343943 46344147 -93972618 + MIR SINE MIR 8 214 -48 237 280 53 0 chr10 46344199 46344274 -93972491 - L2 LINE L2 -2 3311 3233 3842 142 48 11 chr10 46344274 46344941 -93971824 - L1MB3 LINE L1 -58 6125 5434 1206 256 131 37 chr10 46344952 46345152 -93971613 - L2 LINE L2 -302 3011 2831 2257 106 0 0 chr10 46345152 46345477 -93971288 - AluSx SINE Alu 0 325 1 2280 105 0 3 chr10 46345487 46345792 -93970973 - AluSg SINE Alu -6 304 1 1206 256 131 37 chr10 46345792 46346259 -93970506 - L2 LINE L2 -490 2823 2271 350 307 80 13 chr10 46347680 46347830 -93968935 - MIR SINE MIR -80 182 23 513 152 128 8 chr10 46348927 46349052 -93967713 - MER96B DNA MER1_type? 0 417 278 729 242 60 21 chr10 46349053 46349512 -93967253 - MLT1D LTR MaLR 0 505 1 691 193 28 28 chr10 46349606 46349787 -93966978 - MER96B DNA MER1_type? -236 181 1 197 321 83 12 chr10 46349897 46349981 -93966784 - MIR SINE MIR -156 106 17 306 288 144 0 chr10 46350424 46350542 -93966223 + MIR SINE MIR 20 154 -108 225 302 97 15 chr10 46350593 46350734 -93966031 + MIR SINE MIR 1 139 -69 29 47 0 0 chr10 46350938 46350981 -93965784 + GC_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr10 46351146 46351182 -93965583 + GC_rich Low_complexity Low_complexity 1 36 0 834 256 93 4 chr10 46354470 46354739 -93962026 - MER102b DNA MER1_type -25 316 24 403 216 26 173 chr10 46355182 46355413 -93961352 + MIR SINE MIR 33 229 -33 348 320 0 16 chr10 46355483 46355608 -93961157 + (CA)n Simple_repeat Simple_repeat 1 123 0 223 191 24 0 chr10 46355731 46355773 -93960992 - L2 LINE L2 -16 3256 3214 939 230 75 0 chr10 46356260 46356525 -93960240 - L1ME3A LINE L1 -11 6159 5875 3738 167 32 29 chr10 46356566 46357338 -93959427 - L1MB3 LINE L1 -15 6168 5394 346 298 84 0 chr10 46357366 46357497 -93959268 - L1ME3A LINE L1 -316 5854 5713 182 311 44 0 chr10 46358844 46358934 -93957831 - L3 LINE CR1 -461 1116 1023 216 219 0 0 chr10 46359068 46359109 -93957656 - MER5B DNA MER1_type -102 76 36 183 269 19 0 chr10 46359156 46359208 -93957557 + L2 LINE L2 2703 2755 -559 231 36 0 0 chr10 46360881 46360909 -93955856 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 209 354 15 0 chr10 46363787 46363852 -93952913 - L2 LINE L2 -83 3189 3124 488 271 49 7 chr10 46364889 46365033 -93951732 - MIR SINE MIR -48 214 65 287 278 103 0 chr10 46368706 46368803 -93947962 + MIR SINE MIR 31 137 -71 658 288 121 36 chr10 46369502 46370058 -93946707 - L2 LINE L2 -454 2860 2258 219 276 46 46 chr10 46372888 46372975 -93943790 - MIR SINE MIR -74 188 102 331 288 68 31 chr10 46374295 46374458 -93942307 - L2 LINE L2 -446 2868 2700 221 263 158 0 chr10 46374462 46374557 -93942208 - L2 LINE L2 -1584 1730 1621 264 325 104 0 chr10 46375432 46375595 -93941170 - MIR SINE MIR -77 185 6 2601 57 0 3 chr10 46375967 46376267 -93940498 + AluY SINE Alu 1 299 -12 234 319 124 45 chr10 46376921 46377187 -93939578 + L2 LINE L2 2690 2976 -338 22 0 0 0 chr10 46378385 46378407 -93938358 + AT_rich Low_complexity Low_complexity 1 22 0 23 68 0 0 chr10 46382273 46382317 -93934448 + AT_rich Low_complexity Low_complexity 1 44 0 221 277 15 0 chr10 46385544 46385609 -93931156 + L2 LINE L2 2992 3057 -215 328 314 152 10 chr10 46385661 46385865 -93930900 + MIR SINE MIR 20 252 -10 193 371 31 10 chr10 46386868 46386965 -93929800 + L2 LINE L2 3162 3260 -12 2287 122 0 0 chr10 46387325 46387637 -93929128 + AluSx SINE Alu 1 312 0 434 242 108 6 chr10 46388387 46388544 -93928221 + MER104 DNA Tc2 1 173 -7 235 114 0 0 chr10 46388544 46388579 -93928186 + Alu SINE Alu 89 123 -179 1910 164 0 6 chr10 46388596 46388907 -93927858 + AluJo SINE Alu 1 309 -3 664 298 118 10 chr10 46389553 46389942 -93926823 + L1MC4a LINE L1 5455 5885 -1923 2415 68 0 3 chr10 46389942 46390235 -93926530 + AluY SINE Alu 16 307 -4 21 100 0 0 chr10 46391433 46391503 -93925262 + AT_rich Low_complexity Low_complexity 1 70 0 23 0 0 0 chr10 46392847 46392870 -93923895 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 46393983 46394004 -93922761 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 46394995 46395021 -93921744 + AT_rich Low_complexity Low_complexity 1 26 0 2046 126 3 7 chr10 46395385 46395722 -93921043 + AluSx SINE Alu 1 336 0 2124 145 3 0 chr10 46395892 46396196 -93920569 - AluSx SINE Alu -7 305 1 373 301 61 44 chr10 46399165 46399394 -93917371 + MLT1I LTR MaLR 170 402 -7 825 218 124 15 chr10 46399579 46399781 -93916984 + MER58A DNA MER1_type 1 224 0 871 200 121 0 chr10 46400549 46400739 -93916026 + MER20 DNA MER1_type 1 213 -6 451 293 69 21 chr10 46401328 46401516 -93915249 + MLT1I LTR MaLR 71 267 -142 323 340 19 13 chr10 46401529 46401685 -93915080 + HERVL LTR ERVL 5174 5330 -324 22 0 0 0 chr10 46402812 46402834 -93913931 + AT_rich Low_complexity Low_complexity 1 22 0 1807 173 3 19 chr10 46402837 46403150 -93913615 + AluJo SINE Alu 1 308 -4 607 179 0 9 chr10 46403164 46403270 -93913495 + FRAM SINE Alu 64 168 -8 1816 218 39 28 chr10 46403316 46403826 -93912939 + L1MB8 LINE L1 5662 6177 -1 405 0 0 0 chr10 46403858 46403903 -93912862 + (TA)n Simple_repeat Simple_repeat 2 46 0 414 126 69 23 chr10 46404100 46404187 -93912578 + L1MB5 LINE L1 49 139 -6403 3933 150 43 4 chr10 46404200 46404939 -93911826 + L1MB3 LINE L1 5413 6180 -3 1184 206 17 124 chr10 46405161 46405573 -93911192 + L1MB5 LINE L1 1491 1858 -4788 1760 106 0 4 chr10 46405573 46405809 -93910956 + AluSq SINE Alu 1 235 -78 379 151 47 0 chr10 46405834 46405920 -93910845 + G-rich Low_complexity Low_complexity 2 91 0 194 150 25 0 chr10 46405912 46405952 -93910813 + A-rich Low_complexity Low_complexity 4 44 0 * 3747 195 78 8 chr10 46405954 46407511 -93909254 + L1MB5 LINE L1 4999 6664 -8 1490 219 0 72 chr10 46408628 46409003 -93907762 + MLT1A2 LTR MaLR 24 371 -3 931 207 0 58 chr10 46409886 46410128 -93906637 + L1MB8 LINE L1 5951 6178 0 339 331 140 49 chr10 46410147 46410512 -93906253 + L3 LINE CR1 177 574 -1003 236 259 49 12 chr10 46411122 46411203 -93905562 - L2 LINE L2 0 3313 3230 196 320 107 0 chr10 46411512 46411634 -93905131 + L2 LINE L2 2916 3050 -222 198 0 0 0 chr10 46412590 46412612 -93904153 + (TA)n Simple_repeat Simple_repeat 2 23 0 1992 117 39 3 chr10 46413263 46413545 -93903220 + AluSc SINE Alu 1 292 -17 2404 72 16 0 chr10 46413636 46413760 -93903005 + AluY SINE Alu 1 121 -190 369 0 0 0 chr10 46413760 46413801 -93902964 + (CA)n Simple_repeat Simple_repeat 2 42 0 2404 72 16 0 chr10 46413801 46413982 -93902783 + AluY SINE Alu 121 311 0 2302 95 0 0 chr10 46414246 46414541 -93902224 - AluSg SINE Alu -15 295 1 571 306 77 7 chr10 46414692 46415002 -93901763 - L1ME3 LINE L1 -214 5948 5617 965 143 199 0 chr10 46415547 46415743 -93901022 + MER46A DNA MER2_type 1 235 -1 21 36 0 0 chr10 46415810 46415838 -93900927 + AT_rich Low_complexity Low_complexity 1 28 0 234 309 188 54 chr10 46417142 46417291 -93899474 - L2 LINE L2 -547 2767 2599 280 313 69 38 chr10 46418566 46418726 -93898039 - L2 LINE L2 -178 3094 2930 1479 245 150 12 chr10 46418741 46419560 -93897205 - L1MC3 LINE L1 -743 5403 5175 886 201 117 88 chr10 46419555 46419828 -93896937 - L1MD2 LINE L1 -15 6344 6054 * 2244 120 0 0 chr10 46419828 46420128 -93896637 + AluSx SINE Alu 1 300 -12 886 201 117 88 chr10 46420128 46420263 -93896502 - L1MD2 LINE L1 -305 6054 5924 1675 166 10 28 chr10 46420274 46420563 -93896202 + AluJo SINE Alu 12 295 -17 718 186 93 0 chr10 46420607 46420779 -93895986 + L1MD3 LINE L1 7796 7983 -12 575 195 92 12 chr10 46420774 46420938 -93895827 + L1M4 LINE L1 5175 5351 -795 * 2545 211 86 11 chr10 46420932 46422134 -93894631 - L1MD2 LINE L1 -478 5881 4583 * 4499 240 121 19 chr10 46422124 46424003 -93892762 - L1MC3 LINE L1 -951 5195 3013 217 292 56 0 chr10 46424073 46424145 -93892620 - MIR SINE MIR -25 237 162 273 234 135 36 chr10 46424223 46424334 -93892431 - MIR SINE MIR -91 171 50 580 298 163 72 chr10 46424391 46425146 -93891619 - L2 LINE L2 -941 2373 1550 4240 166 75 53 chr10 46425299 46426192 -93890573 + MER21A LTR ERV1 13 925 -6 1807 236 13 42 chr10 46427334 46427809 -93888956 + MLT2B1 LTR ERVL 1 461 -59 713 248 158 35 chr10 46427813 46428067 -93888698 + L2 LINE L2 3029 3313 0 25 83 0 0 chr10 46430190 46430250 -93886515 + AT_rich Low_complexity Low_complexity 1 60 0 677 157 17 9 chr10 46430921 46431036 -93885729 - FLAM_C SINE Alu -27 116 1 985 231 87 34 chr10 46432438 46432850 -93883915 + LTR56 LTR ERV1 12 445 0 576 196 127 73 chr10 46433288 46433452 -93883313 + MER34C LTR ERV1 151 331 -254 1964 122 24 0 chr10 46433452 46433739 -93883026 - AluSx SINE Alu -18 294 1 576 196 127 73 chr10 46433739 46433794 -93882971 + MER34C LTR ERV1 331 382 -203 516 126 0 11 chr10 46434279 46434366 -93882399 + LTR56-int LTR ERV1 1298 1383 -4948 1584 150 20 57 chr10 46434445 46434778 -93881987 + LTR56-int LTR ERV1 1001 1669 -4662 366 175 18 42 chr10 46434781 46434947 -93881818 + (TA)n Simple_repeat Simple_repeat 1 162 0 26 0 0 0 chr10 46434947 46434973 -93881792 + AT_rich Low_complexity Low_complexity 1 26 0 2845 164 94 43 chr10 46435062 46435734 -93881031 + LTR56-int LTR ERV1 2741 3446 -2885 5371 188 62 74 chr10 46435858 46436961 -93879804 + LTR56-int LTR ERV1 1708 2822 -3361 2033 119 3 10 chr10 46436961 46437264 -93879501 - AluSx SINE Alu -11 301 1 5371 188 62 74 chr10 46437264 46437464 -93879301 + LTR56-int LTR ERV1 2822 3023 -3160 2264 89 0 0 chr10 46437464 46437744 -93879021 - AluSg SINE Alu -22 288 9 5371 188 62 74 chr10 46437744 46438792 -93877973 + LTR56-int LTR ERV1 3023 5559 -624 819 181 34 0 chr10 46438793 46438942 -93877823 + FRAM SINE Alu 4 157 -19 1603 200 28 76 chr10 46438976 46439544 -93877221 + LTR56-int LTR ERV1 4456 5038 -85 838 227 77 20 chr10 46439630 46439929 -93876836 + LTR56 LTR ERV1 9 324 -121 444 292 86 51 chr10 46439935 46440328 -93876437 - MLT1J LTR MaLR -72 439 3 29611 92 14 12 chr10 46440345 46445504 -93871261 - L1PA7 LINE L1 0 6154 992 3286 196 44 14 chr10 46445526 46446165 -93870600 + MER21B LTR ERV1 175 832 -31 27 62 0 0 chr10 46446494 46446542 -93870223 + AT_rich Low_complexity Low_complexity 1 48 0 317 312 82 75 chr10 46446759 46447051 -93869714 + L2 LINE L2 2153 2446 -868 181 278 0 19 chr10 46447323 46447377 -93869388 + L2 LINE L2 1177 1229 -2085 1167 315 131 24 chr10 46447702 46448591 -93868174 + L2 LINE L2 1720 2703 -611 180 250 275 0 chr10 46449488 46449568 -93867197 + L2 LINE L2 3208 3309 -4 267 54 0 0 chr10 46450313 46450350 -93866415 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1497 183 16 4 chr10 46450354 46450606 -93866159 - AluJo SINE Alu -26 286 32 420 271 99 7 chr10 46450959 46451110 -93865655 - MER112 DNA MER1_type -6 254 90 572 252 107 63 chr10 46451126 46451444 -93865321 + MER57A LTR ERV1 47 378 -25 247 252 245 7 chr10 46453055 46453210 -93863555 + MIR SINE MIR 65 256 -6 27 0 0 0 chr10 46453432 46453459 -93863306 + AT_rich Low_complexity Low_complexity 1 27 0 775 179 0 0 chr10 46454547 46454681 -93862084 + FAM SINE Alu 35 168 -17 2423 87 7 0 chr10 46454687 46454986 -93861779 + AluSq SINE Alu 2 302 -11 942 259 39 73 chr10 46456966 46457375 -93859390 - L1ME3A LINE L1 -222 5931 5537 281 192 41 27 chr10 46457394 46457467 -93859298 - L1ME3A LINE L1 -711 5438 5365 1081 175 0 0 chr10 46457538 46457709 -93859056 - AluSg/x SINE Alu -11 299 129 776 295 77 21 chr10 46457714 46458232 -93858533 - L1ME3A LINE L1 -891 5238 4692 258 247 90 54 chr10 46458395 46458674 -93858091 + L1MB5 LINE L1 2933 3221 -2925 * 3436 180 51 13 chr10 46458669 46459968 -93856797 + L1MB5 LINE L1 4703 6106 -68 24 32 0 0 chr10 46459992 46460023 -93856742 + AT_rich Low_complexity Low_complexity 1 31 0 1702 165 17 14 chr10 46460030 46460327 -93856438 + AluJb SINE Alu 1 298 -14 237 274 104 0 chr10 46460538 46460644 -93856121 - L1ME3A LINE L1 -3556 2573 2457 263 236 70 55 chr10 46460749 46460843 -93855922 - L1ME3A LINE L1 -3834 2295 2204 2233 135 0 0 chr10 46460843 46461147 -93855618 - AluSx SINE Alu -8 304 1 263 236 70 55 chr10 46461147 46461251 -93855514 - L1ME3A LINE L1 -3925 2204 2094 323 263 146 59 chr10 46461845 46462181 -93854584 - L1MEd LINE L1 -4869 1250 945 2612 53 0 0 chr10 46462181 46462481 -93854284 - AluY SINE Alu -11 300 1 323 263 146 59 chr10 46462481 46462829 -93853936 - L1MEd LINE L1 -5174 945 597 876 227 5 5 chr10 46463034 46463219 -93853546 + MER5A DNA MER1_type 2 186 -3 1562 136 58 167 chr10 46463535 46464056 -93852709 - L1MD2 LINE L1 -2 6240 5777 3778 230 72 26 chr10 46464056 46465266 -93851499 - L1M4 LINE L1 -1073 5073 3809 455 239 0 0 chr10 46465292 46465384 -93851381 + MIR SINE MIR 111 202 -60 323 244 29 0 chr10 46465908 46465999 -93850766 - L1MD2 LINE L1 -532 5589 5511 242 247 75 0 chr10 46466050 46466143 -93850622 - L1MD2 LINE L1 -750 5396 5297 697 175 141 30 chr10 46466162 46466395 -93850370 - Charlie5 DNA MER1_type -87 2525 2267 538 155 26 86 chr10 46466395 46466511 -93850254 + MLT1D LTR MaLR 1 109 -396 1093 183 42 25 chr10 46466529 46466769 -93849996 - L1MD2 LINE L1 -1413 4733 4490 2427 249 23 6 chr10 46466789 46467443 -93849322 - L1MD2 LINE L1 -1863 4283 3619 3418 222 36 34 chr10 46467447 46468358 -93848407 + L1ME1 LINE L1 4687 5601 -565 2281 100 0 3 chr10 46468358 46468657 -93848108 + AluSg SINE Alu 2 299 -11 3418 222 36 34 chr10 46468657 46469220 -93847545 + L1ME1 LINE L1 5601 6161 -5 888 148 91 104 chr10 46469238 46469272 -93847493 + Charlie5 DNA MER1_type 2238 2271 -353 1569 156 123 84 chr10 46469272 46469600 -93847165 - MLT1D LTR MaLR 0 505 150 2484 63 10 0 chr10 46469600 46469902 -93846863 - AluY SINE Alu -6 305 1 1569 156 123 84 chr10 46469902 46470059 -93846706 - MLT1D LTR MaLR -355 150 1 888 148 91 104 chr10 46470059 46470321 -93846444 + Charlie5 DNA MER1_type 2271 2530 -94 267 261 33 0 chr10 46470321 46470413 -93846352 + L1ME LINE L1 5304 5398 -899 524 285 91 19 chr10 46470462 46470725 -93846040 + L1ME LINE L1 5511 5792 -329 280 308 158 7 chr10 46471541 46471687 -93845078 + MIR SINE MIR 25 192 -70 447 194 28 42 chr10 46474023 46474167 -93842598 + MLT1J2 LTR MaLR 72 213 -237 293 312 45 25 chr10 46477496 46477653 -93839112 - L3 LINE CR1 -12 1565 1406 208 270 275 35 chr10 46477761 46477961 -93838804 - L3 LINE CR1 -348 1229 982 * 297 251 23 0 chr10 46477939 46478026 -93838739 + MIR SINE MIR 74 161 -75 524 255 120 43 chr10 46478029 46478237 -93838528 - MLT1H1 LTR MaLR 0 555 332 4230 194 59 19 chr10 46478361 46479243 -93837522 + MER49 LTR ERV1 7 923 0 582 226 39 45 chr10 46479245 46479400 -93837365 - MLT1H1 LTR MaLR -399 156 3 344 263 50 10 chr10 46479402 46479501 -93837264 + MIR SINE MIR 160 262 0 342 236 65 24 chr10 46479663 46479786 -93836979 - MIR SINE MIR -58 204 77 298 328 17 9 chr10 46480192 46480308 -93836457 - MIR SINE MIR -142 120 4 520 299 15 0 chr10 46480399 46480536 -93836229 - L2 LINE L2 -5 3308 3170 218 130 0 43 chr10 46480616 46480662 -93836103 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 211 301 29 73 chr10 46480662 46480798 -93835967 - L2 LINE L2 0 3313 3184 190 211 0 0 chr10 46481231 46481269 -93835496 + MIR SINE MIR 112 149 -113 2805 104 26 14 chr10 46481310 46481731 -93835034 + MSTA LTR MaLR 1 426 -2 21 36 0 0 chr10 46482827 46482855 -93833910 + AT_rich Low_complexity Low_complexity 1 28 0 574 256 39 91 chr10 46483026 46483412 -93833353 - HAL1 LINE L1 -1 2506 2141 1262 301 131 40 chr10 46483518 46484214 -93832551 - HAL1 LINE L1 -1349 1158 332 2310 101 16 3 chr10 46484214 46484521 -93832244 - AluSx SINE Alu -1 311 1 1262 301 131 40 chr10 46484521 46484885 -93831880 - HAL1 LINE L1 -2175 332 2 378 42 0 0 chr10 46484932 46484980 -93831785 + (TG)n Simple_repeat Simple_repeat 2 49 0 234 330 0 0 chr10 46485285 46485376 -93831389 + T-rich Low_complexity Low_complexity 5 95 0 211 290 0 0 chr10 46485460 46485529 -93831236 + T-rich Low_complexity Low_complexity 1 69 0 222 287 81 63 chr10 46487275 46487374 -93829391 - MIR SINE MIR -73 189 84 2686 142 42 7 chr10 46487374 46487832 -93828933 + MER101 LTR ERV1 1 474 0 222 287 81 63 chr10 46487832 46487906 -93828859 - MIR SINE MIR -178 84 13 727 237 76 119 chr10 46487964 46488056 -93828709 + MER113 DNA MER1_type? 32 126 -395 482 228 0 0 chr10 46488056 46488157 -93828608 - L1MB4 LINE L1 -1 6179 6079 727 237 76 119 chr10 46488157 46488474 -93828291 + MER113 DNA MER1_type? 126 423 -98 288 189 0 0 chr10 46489848 46489922 -93826843 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 376 276 0 45 chr10 46489945 46490079 -93826686 - L2 LINE L2 0 3313 3186 242 318 119 11 chr10 46490785 46490961 -93825804 + L2 LINE L2 2987 3181 -91 2527 64 0 0 chr10 46491125 46491422 -93825343 + AluY SINE Alu 1 297 -14 1937 87 97 109 chr10 46491471 46491889 -93824876 + LTR14B LTR ERVK 1 608 0 229 328 73 11 chr10 46495816 46495993 -93820772 + L2 LINE L2 2216 2403 -911 329 151 0 0 chr10 46496386 46496439 -93820326 + L1MA6 LINE L1 6248 6300 0 358 222 8 51 chr10 46497370 46497487 -93819278 - MIR SINE MIR -115 147 36 244 312 28 27 chr10 46497869 46498050 -93818715 + L1ME3 LINE L1 5353 5534 -628 1363 162 0 0 chr10 46498089 46498293 -93818472 + AluJb SINE Alu 86 289 -23 180 0 0 0 chr10 46498299 46498319 -93818446 + (CAA)n Simple_repeat Simple_repeat 2 21 0 242 232 87 0 chr10 46498415 46498484 -93818281 + L1ME3 LINE L1 5717 5791 -373 394 254 254 49 chr10 46498539 46498605 -93818160 + L2 LINE L2 1759 1810 -1504 505 210 84 25 chr10 46498605 46498724 -93818041 - FLAM_A SINE Alu -7 126 1 394 254 254 49 chr10 46498724 46499213 -93817552 + L2 LINE L2 1810 2428 -886 233 281 157 37 chr10 46499226 46499525 -93817240 + L2 LINE L2 2625 2959 -355 709 118 37 137 chr10 46499742 46499903 -93816862 - Tigger7 DNA MER2_type 0 2491 2347 * 1552 191 137 0 chr10 46499891 46500206 -93816559 - Tigger7 DNA MER2_type -2128 359 2 26 50 0 0 chr10 46500385 46500425 -93816340 + AT_rich Low_complexity Low_complexity 1 40 0 306 323 57 0 chr10 46500489 46500613 -93816152 - L2 LINE L2 -2 3311 3181 258 233 47 12 chr10 46501290 46501376 -93815389 + LTR16C LTR ERVL 380 468 -23 1742 182 45 0 chr10 46501932 46502223 -93814542 - AluJo SINE Alu -8 304 1 443 255 15 51 chr10 46505306 46505502 -93811263 + MIR SINE MIR 17 205 -57 204 238 220 77 chr10 46506437 46506605 -93810160 + MIR SINE MIR 61 252 -10 686 185 159 53 chr10 46506690 46506917 -93809848 + L1ME3 LINE L1 5912 6162 0 1555 242 46 23 chr10 46507764 46508281 -93808484 - HAL1 LINE L1 -42 2465 1937 315 189 198 9 chr10 46508454 46508565 -93808200 + MIR SINE MIR 125 256 -6 313 335 48 89 chr10 46509042 46509335 -93807430 - L2 LINE L2 0 3272 2992 232 343 0 0 chr10 46509341 46509411 -93807354 + (CATG)n Simple_repeat Simple_repeat 1 70 0 667 139 70 9 chr10 46509500 46509615 -93807150 - MER20 DNA MER1_type -97 122 1 1472 128 104 34 chr10 46509700 46509997 -93806768 - MER33 DNA MER1_type -1 323 6 183 100 0 0 chr10 46511551 46511581 -93805184 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 656 260 47 12 chr10 46512112 46512365 -93804400 - MIR SINE MIR 0 262 3 231 184 0 0 chr10 46513107 46513156 -93803609 + L2 LINE L2 2928 2976 -296 581 201 149 7 chr10 46514385 46514539 -93802226 - MER5B DNA MER1_type 0 178 3 350 292 68 47 chr10 46514688 46514880 -93801885 + MER91A DNA MER1_type 1 196 0 1782 194 32 45 chr10 46515169 46515572 -93801193 - MER63B DNA MER1_type -38 398 1 953 219 116 36 chr10 46515629 46515990 -93800775 + MLT1J1 LTR MaLR 4 393 -53 815 89 0 8 chr10 46518197 46518320 -93798445 + (TTCCC)n Simple_repeat Simple_repeat 3 124 0 1682 99 0 0 chr10 46518321 46518533 -93798232 - AluSg SINE Alu -98 212 1 297 263 0 12 chr10 46519086 46519166 -93797599 + MLT1K LTR MaLR 509 587 -1 513 317 105 35 chr10 46519980 46520188 -93796577 - L2 LINE L2 -995 2319 2127 1703 220 70 5 chr10 46520188 46520560 -93796205 + MSTD LTR MaLR 1 396 0 513 317 105 35 chr10 46520560 46520808 -93795957 - L2 LINE L2 -1187 2127 1831 5264 223 51 39 chr10 46520944 46522430 -93794335 + L1M4 LINE L1 6 1509 -5033 723 227 0 19 chr10 46522459 46522613 -93794152 + Tigger1 DNA MER2_type 13 163 -2255 * 891 188 125 0 chr10 46522594 46522786 -93793979 + Tigger1 DNA MER2_type 2202 2417 -1 14210 190 29 16 chr10 46522786 46526438 -93790327 + L1M4 LINE L1 1513 5814 -830 301 289 31 23 chr10 46526744 46526872 -93789893 - MIR SINE MIR -98 164 36 1474 225 50 19 chr10 46528075 46528754 -93788011 - L1M4 LINE L1 -3507 2875 2171 238 150 0 0 chr10 46528779 46528819 -93787946 - L1M LINE L1 -693 5428 5389 937 65 0 136 chr10 46528839 46529008 -93787757 - L1MA5 LINE L1 -2 6298 6153 507 289 46 20 chr10 46529010 46529207 -93787558 + MIR SINE MIR 28 229 -33 329 301 37 18 chr10 46530398 46530561 -93786204 + MIR SINE MIR 27 192 -70 2010 146 7 10 chr10 46530569 46530878 -93785887 + AluSx SINE Alu 1 308 -4 466 240 32 26 chr10 46531455 46531609 -93785156 + MIR SINE MIR 29 183 -79 414 0 0 0 chr10 46532106 46532152 -93784613 + (CA)n Simple_repeat Simple_repeat 2 47 0 1991 247 73 56 chr10 46533111 46533820 -93782945 + MER21B LTR ERV1 1 725 -138 225 65 0 0 chr10 46533820 46533851 -93782914 + (AATTG)n Simple_repeat Simple_repeat 1 31 0 1991 247 73 56 chr10 46533851 46533878 -93782887 + MER21B LTR ERV1 725 750 -113 286 298 46 38 chr10 46534216 46534347 -93782418 + MER91A DNA MER1_type 45 176 -20 911 276 46 28 chr10 46535497 46535780 -93780985 + LTR16A LTR ERVL 89 376 -74 1973 224 147 18 chr10 46535786 46536441 -93780324 - L1M4 LINE L1 -1083 5063 4325 * 4260 220 33 42 chr10 46536438 46536508 -93780257 - L1M4 LINE L1 -1525 4621 4552 2257 99 0 0 chr10 46536508 46536802 -93779963 - AluSc SINE Alu -15 294 1 4260 220 33 42 chr10 46536802 46537930 -93778835 - L1M4 LINE L1 -1594 4552 3434 1613 198 139 84 chr10 46537920 46538388 -93778377 - L1MCa LINE L1 -4278 2329 1888 * 2504 83 9 0 chr10 46538388 46538725 -93778040 - L1PB2 LINE L1 0 6151 5812 1613 198 139 84 chr10 46538725 46539038 -93777727 - L1MCa LINE L1 -4719 1888 1382 334 268 10 10 chr10 46539222 46539319 -93777446 - L1MCa LINE L1 -6310 116 20 338 252 131 0 chr10 46539477 46539584 -93777181 + L2 LINE L2 3193 3313 0 516 277 74 15 chr10 46539876 46540078 -93776687 - MIR SINE MIR -12 250 37 310 240 60 4 chr10 46540625 46540752 -93776013 + MIR SINE MIR 20 149 -73 1702 148 63 56 chr10 46541116 46541494 -93775271 + MLT1B LTR MaLR 7 387 -3 608 275 104 31 chr10 46541892 46542248 -93774517 + LTR16C LTR ERVL 109 490 -1 244 254 79 0 chr10 46542279 46542360 -93774405 + MIR SINE MIR 103 191 -71 487 200 25 19 chr10 46543754 46543914 -93772851 + (TGGA)n Simple_repeat Simple_repeat 3 163 0 899 128 17 17 chr10 46543953 46544132 -93772633 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 598 267 44 3 chr10 46544571 46544802 -93771963 + MLT2F LTR ERVL 2 325 -338 200 35 35 0 chr10 46544802 46544831 -93771934 + (TG)n Simple_repeat Simple_repeat 2 31 0 598 267 44 3 chr10 46544831 46544867 -93771898 + MLT2F LTR ERVL 325 358 -305 307 234 0 0 chr10 46545070 46545134 -93771631 - L2 LINE L2 0 3313 3250 455 266 13 60 chr10 46545300 46545533 -93771232 + L1M4 LINE L1 17 238 -6304 2152 262 40 45 chr10 46545828 46547100 -93769665 + L1M4 LINE L1 716 1957 -4689 1562 136 58 167 chr10 46547402 46547923 -93768842 - L1MD2 LINE L1 -2 6240 5777 4666 234 87 28 chr10 46547923 46549608 -93767157 - L1MDa LINE L1 -1073 5467 3882 1406 142 40 4 chr10 46549608 46549834 -93766931 + MER46A DNA MER2_type 3 236 0 4666 234 87 28 chr10 46549834 46550076 -93766689 - L1MDa LINE L1 -2658 3882 1166 873 139 9 11 chr10 46550081 46550312 -93766453 + AluJo SINE Alu 6 300 -12 17266 90 7 3 chr10 46550312 46552702 -93764063 - L1PA7 LINE L1 -1500 4646 2247 7031 52 12 1 chr10 46552703 46554185 -93762580 + L1PA7 LINE L1 4659 6148 -6 722 229 14 42 chr10 46554181 46554395 -93762370 - L1MDa LINE L1 -5361 1179 972 7692 70 4 25 chr10 46554498 46555519 -93761246 - LTR13 LTR ERVK -8 999 1 1433 206 147 33 chr10 46555611 46556067 -93760698 - L1MDa LINE L1 -6014 526 19 334 266 85 80 chr10 46556517 46556716 -93760049 - L1M4 LINE L1 -3741 2405 2206 28 0 0 0 chr10 46556917 46556945 -93759820 + AT_rich Low_complexity Low_complexity 1 28 0 2936 174 29 43 chr10 46557687 46558342 -93758423 + MER45R DNA AcHobo 936 1581 0 207 100 0 0 chr10 46558373 46558403 -93758362 + (GTATG)n Simple_repeat Simple_repeat 5 34 0 271 156 22 0 chr10 46558764 46558809 -93757956 - MSTB1 LTR MaLR 0 432 387 427 184 18 0 chr10 46559698 46559800 -93756965 + (CA)n Simple_repeat Simple_repeat 2 108 -4 1952 112 175 16 chr10 46559800 46560114 -93756651 + THE1B LTR MaLR 1 364 0 427 184 18 0 chr10 46560114 46560120 -93756645 + (CA)n Simple_repeat Simple_repeat 108 112 0 1029 157 6 0 chr10 46560338 46560497 -93756268 - Tigger3(Golem) DNA MER2_type -1 3028 2869 1127 123 13 0 chr10 46560497 46560652 -93756113 - AluSx SINE Alu -155 157 1 1996 152 0 3 chr10 46561530 46561832 -93754933 + AluJb SINE Alu 1 301 -11 197 159 23 0 chr10 46561875 46561919 -93754846 + CT-rich Low_complexity Low_complexity 2 46 0 207 100 0 0 chr10 46562097 46562127 -93754638 + (TA)n Simple_repeat Simple_repeat 2 31 0 204 182 0 0 chr10 46562370 46562414 -93754351 + CT-rich Low_complexity Low_complexity 2 45 0 627 207 11 52 chr10 46562733 46562907 -93753858 + L1M4 LINE L1 4457 4623 -1523 1052 183 5 25 chr10 46563185 46563382 -93753383 + AluJb SINE Alu 85 277 -35 258 32 0 0 chr10 46563389 46563420 -93753345 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1057 222 153 63 chr10 46563650 46564154 -93752611 + MLT1H LTR MaLR 1 549 0 288 277 102 22 chr10 46564854 46564991 -93751774 - MIR SINE MIR -79 183 36 2319 124 140 8 chr10 46565082 46565460 -93751305 - MSTA LTR MaLR 0 428 1 192 200 29 0 chr10 46565967 46566002 -93750763 + L2 LINE L2 3223 3258 -14 199 239 125 6 chr10 46566043 46566188 -93750577 - MIR SINE MIR -1 261 58 553 219 8 34 chr10 46568123 46568242 -93748523 + MIR SINE MIR 36 151 -111 519 17 0 0 chr10 46568257 46568317 -93748448 + (TG)n Simple_repeat Simple_repeat 2 61 0 332 259 0 12 chr10 46568434 46568515 -93748250 - L2 LINE L2 -3 3310 3231 472 259 154 12 chr10 46568612 46568871 -93747894 + MLT1L LTR MaLR 81 376 -239 1353 292 188 33 chr10 46569023 46569650 -93747115 - L2 LINE L2 -71 3242 2714 185 0 40 0 chr10 46569650 46569675 -93747090 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1353 292 188 33 chr10 46569675 46570269 -93746496 - L2 LINE L2 -599 2714 1827 305 319 193 23 chr10 46570294 46570683 -93746082 - L2 LINE L2 -1809 1505 1051 711 253 46 34 chr10 46570695 46570932 -93745833 - MIR SINE MIR -21 241 2 668 234 0 19 chr10 46571143 46571297 -93745468 - MLT1J2 LTR MaLR -299 151 1 706 238 85 58 chr10 46571299 46571593 -93745172 - L2 LINE L2 -2280 1034 733 923 194 28 55 chr10 46571666 46571883 -93744882 - MER115 DNA AcHobo 0 693 483 4950 143 35 24 chr10 46572096 46572941 -93743824 + ERVL LTR ERVL 4580 5434 -330 28 0 0 0 chr10 46573464 46573492 -93743273 + AT_rich Low_complexity Low_complexity 1 28 0 795 296 112 85 chr10 46574580 46574647 -93742118 + L2 LINE L2 1949 2013 -1259 1435 231 123 35 chr10 46574647 46575110 -93741655 + MLT1D LTR MaLR 2 505 0 795 296 112 85 chr10 46575110 46575783 -93740982 + L2 LINE L2 2013 2667 -605 1602 179 14 4 chr10 46575783 46576062 -93740703 + AluJb SINE Alu 1 282 -30 180 111 0 0 chr10 46576062 46576089 -93740676 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 795 296 112 85 chr10 46576089 46576620 -93740145 + L2 LINE L2 2666 3271 -1 1322 136 77 14 chr10 46576629 46576850 -93739915 - MER46A DNA MER2_type -1 235 1 938 302 95 17 chr10 46577062 46577526 -93739239 + L1MEc LINE L1 22 521 -5875 11869 204 47 10 chr10 46577639 46579333 -93737432 - L1PA16 LINE L1 -17 6149 4520 215 31 31 0 chr10 46579333 46579365 -93737400 + (TG)n Simple_repeat Simple_repeat 2 34 0 11869 204 47 10 chr10 46579365 46581373 -93735392 - L1PA16 LINE L1 -1646 4520 2316 323 127 36 0 chr10 46581427 46581482 -93735283 + Charlie1 DNA MER1_type 104 160 -2601 686 174 103 40 chr10 46581517 46581741 -93735024 + Charlie1 DNA MER1_type 2524 2761 0 425 296 112 11 chr10 46581793 46582070 -93734695 - L1M4 LINE L1 -2636 3510 3206 1106 178 103 16 chr10 46582165 46582407 -93734358 + Charlie1b DNA MER1_type 2062 86 -437 * 1496 185 149 6 chr10 46582403 46582766 -93733999 + Charlie1b DNA MER1_type 1654 2068 0 477 221 125 42 chr10 46582769 46583009 -93733756 - Charlie1b DNA MER1_type -2 521 262 459 247 88 12 chr10 46583639 46583809 -93732956 + HERVI LTR ERV1 188 370 -6279 2279 318 42 41 chr10 46584553 46586611 -93730154 + HERVI LTR ERV1 2852 5686 -2099 868 170 82 29 chr10 46587654 46587860 -93728905 - Charlie1b DNA MER1_type -256 267 51 22 0 0 0 chr10 46588236 46588258 -93728507 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 46588654 46588680 -93728085 + AT_rich Low_complexity Low_complexity 1 26 0 656 232 86 80 chr10 46588944 46589176 -93727589 + MIR SINE MIR 1 235 -27 568 266 43 11 chr10 46589619 46589803 -93726962 + L1MC4 LINE L1 6820 7009 -1033 * 3377 227 45 65 chr10 46589792 46589942 -93726823 + L1MB7 LINE L1 3086 3237 -2909 1618 116 8 17 chr10 46589942 46590183 -93726582 + AluSg/x SINE Alu 71 309 -1 3377 227 45 65 chr10 46590183 46591219 -93725546 + L1MB7 LINE L1 3237 4249 -1897 190 0 67 0 chr10 46591224 46591254 -93725511 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 6557 161 56 43 chr10 46591257 46592679 -93724086 + L1MC3 LINE L1 6345 7784 -1 330 260 59 104 chr10 46592891 46592955 -93723810 + L1MC4 LINE L1 7098 7163 -879 1970 103 0 0 chr10 46592955 46593207 -93723558 + AluSx SINE Alu 41 292 -20 330 260 59 104 chr10 46593207 46593430 -93723335 + L1MC4 LINE L1 7163 7372 -670 312 221 94 70 chr10 46593494 46593766 -93722999 + L1MC4 LINE L1 7296 7672 -370 875 129 7 14 chr10 46593813 46593952 -93722813 + L1M3e LINE L1 7 144 -6886 232 302 10 42 chr10 46595701 46595797 -93720968 + L1MEd LINE L1 561 653 -5466 4200 182 38 56 chr10 46596288 46596812 -93719953 + L1MB7 LINE L1 4731 5263 -921 1506 176 44 14 chr10 46596812 46597108 -93719657 + AluJo SINE Alu 1 305 -7 4200 182 38 56 chr10 46597108 46597660 -93719105 + L1MB7 LINE L1 5263 5823 -361 1840 150 3 46 chr10 46597660 46597986 -93718779 + AluJo SINE Alu 1 312 0 2110 114 16 0 chr10 46597988 46598296 -93718469 + AluSp SINE Alu 1 313 0 4200 182 38 56 chr10 46598296 46598409 -93718356 + L1MB7 LINE L1 5824 5937 -247 2122 125 0 7 chr10 46598409 46598706 -93718059 + AluSx SINE Alu 2 296 -16 4200 182 38 56 chr10 46598706 46598974 -93717791 + L1MB7 LINE L1 5937 6174 -10 308 257 114 50 chr10 46598974 46599114 -93717651 + MER112 DNA MER1_type 106 254 -6 395 299 135 34 chr10 46599144 46599351 -93717414 + L2 LINE L2 72 299 -3015 541 315 82 21 chr10 46599361 46599701 -93717064 + L2 LINE L2 553 913 -2401 1946 140 73 24 chr10 46599800 46600171 -93716594 + MLT2C1 LTR ERVL 1 389 -8 562 292 6 41 chr10 46600173 46600344 -93716421 + L2 LINE L2 1101 1265 -2049 226 323 112 19 chr10 46600418 46600579 -93716186 + L2 LINE L2 1400 1575 -1739 292 309 58 22 chr10 46600604 46600743 -93716022 + L2 LINE L2 1709 1852 -1462 1660 134 67 28 chr10 46600743 46601026 -93715739 + AluJo SINE Alu 1 294 -18 630 248 39 13 chr10 46601116 46601269 -93715496 + MIR SINE MIR 105 261 -1 2105 142 61 9 chr10 46601736 46602066 -93714699 - MER7A DNA MER2_type -1 345 1 2541 129 51 18 chr10 46602459 46602910 -93713855 + ERVL-B2 LTR ERVL 5249 5714 -50 411 167 13 0 chr10 46602971 46603049 -93713716 + MLT2B2 LTR ERVL 1 79 -441 2300 127 48 28 chr10 46603050 46603405 -93713360 + THE1B LTR MaLR 1 362 -2 11867 86 0 34 chr10 46603407 46603979 -93712786 + THE1B-int LTR MaLR 1 591 -989 2683 70 0 20 chr10 46603979 46604322 -93712443 + L1PA8 LINE L1 5836 6171 -1 11867 86 0 34 chr10 46604322 46605377 -93711388 + THE1B-int LTR MaLR 591 1573 -7 2354 121 53 28 chr10 46605383 46605738 -93711027 + THE1B LTR MaLR 1 364 0 1478 209 166 5 chr10 46605738 46606106 -93710659 + MLT2B2 LTR ERVL 76 502 -13 23 0 0 0 chr10 46606216 46606239 -93710526 + AT_rich Low_complexity Low_complexity 1 23 0 6136 171 9 3 chr10 46606253 46608153 -93708612 + L1PA14 LINE L1 4249 6148 -13 33 25 0 0 chr10 46608206 46608246 -93708519 + AT_rich Low_complexity Low_complexity 1 40 0 363 248 20 10 chr10 46608563 46608664 -93708101 - MER5A DNA MER1_type -25 164 63 336 302 29 14 chr10 46608569 46608708 -93708057 + MER5A DNA MER1_type 43 183 -6 * 907 297 78 36 chr10 46609055 46609475 -93707290 - L1MC4a LINE L1 -1886 5922 5482 2438 69 0 0 chr10 46609475 46609766 -93706999 - AluY SINE Alu -20 291 1 907 297 78 36 chr10 46609766 46609783 -93706982 - L1MC4a LINE L1 -2326 5482 5467 571 341 27 17 chr10 46610804 46611061 -93705704 + MIR SINE MIR 6 262 0 381 328 53 41 chr10 46611517 46611919 -93704846 - L2 LINE L2 -214 3058 2645 4365 185 34 7 chr10 46612017 46612866 -93703899 + MER63C DNA MER1_type 57 928 -2 193 176 319 22 chr10 46613268 46613359 -93703406 - MIR SINE MIR -144 118 1 484 305 102 48 chr10 46613947 46614547 -93702218 - L2 LINE L2 -418 2896 2265 455 256 111 29 chr10 46614645 46614817 -93701948 - L1ME LINE L1 -372 5749 5564 3084 230 47 43 chr10 46616208 46617141 -93699624 - L1MD3 LINE L1 -38 7957 5269 1763 180 29 14 chr10 46617174 46617678 -93699087 - L1MB7 LINE L1 -203 6399 5566 2394 239 194 11 chr10 46617678 46618550 -93698215 - L1MDa LINE L1 -5090 1450 420 * 7156 208 55 74 chr10 46618548 46618778 -93697987 - L1MB7 LINE L1 -1231 5333 5100 6045 125 4 7 chr10 46618778 46620258 -93696507 - L1PA14 LINE L1 -3 6158 4679 7156 208 55 74 chr10 46620258 46622238 -93694527 - L1MB7 LINE L1 -1464 5100 3084 883 146 0 8 chr10 46622238 46622409 -93694356 + AluSg/x SINE Alu 157 326 0 7156 208 55 74 chr10 46622409 46624551 -93692214 - L1MB7 LINE L1 -3480 3084 821 1371 201 228 35 chr10 46624552 46624951 -93691814 + MLT2B1 LTR ERVL 5 480 -40 260 93 0 37 chr10 46624961 46625015 -93691750 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 533 194 8 31 chr10 46625015 46625144 -93691621 - L1MCa LINE L1 -5100 1464 1339 314 113 75 0 chr10 46625168 46625221 -93691544 + MLT2B2 LTR ERVL 459 515 0 843 234 68 21 chr10 46625221 46625456 -93691309 - L1MCa LINE L1 -5217 828 583 270 56 0 0 chr10 46625505 46625541 -93691224 + (CA)n Simple_repeat Simple_repeat 1 36 0 190 167 125 69 chr10 46625805 46625877 -93690888 + MIR SINE MIR 72 147 -115 775 266 146 3 chr10 46626125 46626475 -93690290 - MER113 DNA MER1_type? -120 401 2 266 335 77 13 chr10 46626584 46626739 -93690026 - MIR SINE MIR -47 215 51 290 245 9 57 chr10 46627367 46627473 -93689292 - MIR SINE MIR -88 174 74 1990 135 0 43 chr10 46627584 46627910 -93688855 + AluSx SINE Alu 1 312 0 235 217 43 0 chr10 46627916 46627962 -93688803 + MLT1D LTR MaLR 23 70 -435 983 238 84 87 chr10 46627976 46628274 -93688491 + MLT1D LTR MaLR 171 505 0 360 310 137 41 chr10 46629234 46629673 -93687092 + L2 LINE L2 2826 3306 -7 742 242 137 0 chr10 46630318 46630529 -93686236 + MIR SINE MIR 2 241 -21 824 262 19 19 chr10 46631360 46631623 -93685142 - L1M4c LINE L1 -4550 1834 1572 441 211 0 0 chr10 46631699 46631789 -93684976 - L1M4c LINE L1 -4804 1580 1491 * 597 214 77 16 chr10 46631786 46631968 -93684797 - L1M4 LINE L1 -1076 5070 4878 290 149 0 46 chr10 46632227 46632314 -93684451 + (GAAAA)n Simple_repeat Simple_repeat 3 85 0 210 324 0 0 chr10 46633178 46633252 -93683513 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 192 282 24 12 chr10 46633274 46633359 -93683406 - L2 LINE L2 -2 3270 3185 2148 116 3 32 chr10 46634076 46634386 -93682379 + AluSx SINE Alu 1 301 -11 2243 100 0 29 chr10 46634479 46634790 -93681975 + AluSq SINE Alu 6 307 -6 253 231 0 0 chr10 46635246 46635298 -93681467 - LTR41 LTR ERVL -617 156 105 273 262 50 50 chr10 46636228 46636367 -93680398 + MIR SINE MIR 51 188 -62 303 291 155 7 chr10 46636416 46636564 -93680201 + L1ME LINE L1 5577 5746 -375 579 207 41 30 chr10 46638561 46638730 -93678035 - MER117 DNA MER1_type -20 177 7 475 231 0 0 chr10 46639402 46639510 -93677255 + MIR SINE MIR 138 245 -17 189 107 0 0 chr10 46639514 46639542 -93677223 + (TAA)n Simple_repeat Simple_repeat 2 29 0 203 183 9 0 chr10 46639599 46639652 -93677113 - MIR SINE MIR -63 145 93 536 247 115 65 chr10 46639790 46640069 -93676696 - MLT1L LTR MaLR -114 501 209 429 279 7 14 chr10 46640403 46640550 -93676215 - MER117 DNA MER1_type 0 197 52 1937 144 0 27 chr10 46640832 46641131 -93675634 + AluSx SINE Alu 1 291 -21 215 154 26 0 chr10 46641286 46641325 -93675440 + CT-rich Low_complexity Low_complexity 4 43 0 675 197 53 26 chr10 46641531 46641683 -93675082 + MER45A DNA AcHobo 1 156 -22 184 309 12 24 chr10 46642273 46642357 -93674408 - L2 LINE L2 -50 3222 3140 748 244 24 47 chr10 46642968 46643181 -93673584 - MER3 DNA MER1_type 0 209 2 715 211 112 14 chr10 46643481 46643696 -93673069 - LTR16A1 LTR ERVL 0 457 221 266 151 38 0 chr10 46643696 46643749 -93673016 + MER96 DNA MER1_type? 3 57 -118 375 271 90 13 chr10 46645231 46645386 -93671379 - MIR SINE MIR -76 186 20 1061 257 51 59 chr10 46645812 46646337 -93670428 - MLT1H LTR MaLR -16 533 13 210 252 39 158 chr10 46647927 46648054 -93668711 + MIR SINE MIR 60 171 -91 452 266 67 97 chr10 46648886 46649217 -93667548 - L2 LINE L2 -27 3286 2966 1939 258 108 66 chr10 46650715 46651559 -93665206 - MER45C DNA AcHobo -24 929 51 198 294 183 16 chr10 46651666 46651792 -93664973 + MER5B DNA MER1_type 29 175 -3 603 299 40 5 chr10 46652586 46652787 -93663978 + MIR SINE MIR 40 247 -15 562 222 52 121 chr10 46653442 46653920 -93662845 - MER65A LTR ERV1 0 445 1 847 291 25 4 chr10 46653920 46654157 -93662608 - MER65A-int LTR ERV1 0 4871 4630 4111 224 87 67 chr10 46654199 46656813 -93659952 - MER65A-int LTR ERV1 -977 3894 1679 650 212 98 83 chr10 46656937 46657356 -93659409 - MER65A-int LTR ERV1 -3269 1667 1243 321 190 80 102 chr10 46657453 46657590 -93659175 - MER34-int LTR ERV1 -4809 1522 1389 658 291 122 43 chr10 46657638 46658105 -93658660 - MER34-int LTR ERV1 -5759 572 69 834 192 103 44 chr10 46658180 46658638 -93658127 - MER34 LTR ERV1 0 542 27 359 230 43 86 chr10 46659415 46659602 -93657163 - MER65A LTR ERV1 0 445 267 403 235 61 9 chr10 46659783 46659898 -93656867 - MER65A LTR ERV1 -324 121 1 1496 236 24 16 chr10 46661070 46661439 -93655326 - MLT1A2 LTR MaLR 0 374 3 1098 146 2 0 chr10 46662941 46663291 -93653474 + (TCCA)n Simple_repeat Simple_repeat 3 527 0 33 0 0 0 chr10 46663497 46663530 -93653235 + AT_rich Low_complexity Low_complexity 1 33 0 4175 88 40 15 chr10 46663532 46664187 -93652578 - L1PB1 LINE L1 -3 6148 5478 1080 160 0 2 chr10 46664986 46665343 -93651422 + (TCCA)n Simple_repeat Simple_repeat 1 537 0 33 0 0 0 chr10 46665537 46665570 -93651195 + AT_rich Low_complexity Low_complexity 1 33 0 6475 132 10 5 chr10 46665572 46667035 -93649730 - L1PB1 LINE L1 -3 6148 4680 293 352 78 35 chr10 46667038 46667268 -93649497 - MIR SINE MIR 0 262 23 194 203 0 34 chr10 46667811 46667870 -93648895 + L3 LINE CR1 1167 1223 -354 616 276 105 109 chr10 46668182 46668696 -93648069 - MLT1K LTR MaLR -3 585 74 1850 147 64 59 chr10 46668855 46669243 -93647522 + MLT1B LTR MaLR 1 390 0 658 266 70 25 chr10 46669438 46669682 -93647083 + MER112 DNA MER1_type 1 255 -1 251 309 138 21 chr10 46669776 46669964 -93646801 + L2 LINE L2 3103 3312 -1 292 271 85 17 chr10 46670370 46670488 -93646277 + MIR SINE MIR 78 203 -59 255 182 0 0 chr10 46670778 46670822 -93645943 - MLT2D LTR ERVL 0 515 472 658 99 38 0 chr10 46670824 46670955 -93645810 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 1119 211 36 106 chr10 46670955 46671343 -93645422 - MLT2D LTR ERVL -52 362 2 255 308 0 0 chr10 46672025 46672090 -93644675 - L2 LINE L2 -554 2760 2696 5261 137 22 16 chr10 46672549 46672833 -93643932 - L1MC1 LINE L1 -2 6331 6050 2162 196 26 13 chr10 46672833 46673286 -93643479 - MER65C LTR ERV1 0 461 3 5261 137 22 16 chr10 46673286 46673872 -93642893 - L1MC1 LINE L1 -283 6050 5456 243 288 85 8 chr10 46674230 46674348 -93642417 + LTR16A LTR ERVL 314 440 -10 222 318 129 12 chr10 46674674 46674844 -93641921 + MIR SINE MIR 58 247 -15 30 0 0 0 chr10 46675450 46675480 -93641285 + AT_rich Low_complexity Low_complexity 1 30 0 1293 102 6 0 chr10 46675496 46675662 -93641103 - AluSq SINE Alu -144 169 3 725 262 136 19 chr10 46677049 46677469 -93639296 - L1ME4a LINE L1 -76 6045 5577 307 229 213 0 chr10 46677746 46677868 -93638897 - MER103 DNA DNA -17 149 2 264 299 39 0 chr10 46678162 46678239 -93638526 - L1ME LINE L1 -460 5661 5582 372 103 0 0 chr10 46679071 46679129 -93637636 + (ATG)n Simple_repeat Simple_repeat 3 60 0 229 314 58 0 chr10 46679748 46679834 -93636931 + MIR3 SINE MIR 73 163 -45 3570 230 130 15 chr10 46682404 46683461 -93633304 - MER69B DNA AcHobo -48 1178 1 1778 147 21 4 chr10 46684073 46684352 -93632413 + AluJo SINE Alu 6 289 -23 346 306 0 0 chr10 46685223 46685331 -93631434 + MIR SINE MIR 124 231 -31 910 296 53 17 chr10 46686129 46686484 -93630281 + L1ME4a LINE L1 5539 5906 -215 327 236 97 0 chr10 46686487 46686559 -93630206 + MER3 DNA MER1_type 2 80 -129 2554 150 8 0 chr10 46686570 46686964 -93629801 - MER101 LTR ERV1 -2 472 76 450 62 25 12 chr10 46686964 46687044 -93629721 + (TTTA)n Simple_repeat Simple_repeat 4 84 0 555 262 215 37 chr10 46687071 46687392 -93629373 - MLT1J2 LTR MaLR -28 422 45 1960 124 29 10 chr10 46687916 46688230 -93628535 - L1PA16 LINE L1 -9 6157 5838 1997 170 2 18 chr10 46688230 46688624 -93628141 + L1 LINE L1 4300 4687 -1459 630 88 0 0 chr10 46688624 46688704 -93628061 - MER101 LTR ERV1 -394 80 1 482 187 57 49 chr10 46688704 46688827 -93627938 + MER3 DNA MER1_type 86 209 0 294 254 78 49 chr10 46688877 46689019 -93627746 + L1ME4a LINE L1 5964 6109 -12 206 338 115 7 chr10 46689212 46689351 -93627414 - MIR SINE MIR -86 176 23 460 258 155 0 chr10 46689507 46689662 -93627103 + MER5A DNA MER1_type 10 188 -1 279 215 0 0 chr10 46689704 46689769 -93626996 + MIR SINE MIR 69 133 -75 211 320 78 51 chr10 46690745 46691076 -93625689 + L2 LINE L2 2633 2972 -342 271 261 181 35 chr10 46691504 46691791 -93624974 - L1ME LINE L1 -500 5666 5338 843 223 39 22 chr10 46692820 46693049 -93623716 + MIR SINE MIR 23 255 -7 213 39 0 0 chr10 46693397 46693423 -93623342 + (CA)n Simple_repeat Simple_repeat 1 26 0 2228 100 0 26 chr10 46694555 46694865 -93621900 - AluSp SINE Alu -11 302 1 279 279 55 8 chr10 46695096 46695280 -93621485 - MIR SINE MIR -16 246 3 1130 227 118 79 chr10 46695664 46696196 -93620569 - MLT1H1 LTR MaLR -1 554 2 354 278 17 9 chr10 46697148 46697263 -93619502 + MIR SINE MIR 80 195 -67 354 283 26 0 chr10 46697479 46697592 -93619173 - L2 LINE L2 -15 3257 3142 1150 194 60 7 chr10 46698053 46698336 -93618429 - L1MB3 LINE L1 -1 6182 5885 181 292 67 25 chr10 46698582 46698702 -93618063 + L2 LINE L2 3138 3262 -10 208 333 53 9 chr10 46699481 46699595 -93617170 - MIR SINE MIR -52 210 92 2994 56 0 0 chr10 46700454 46700809 -93615956 - THE1A LTR MaLR 0 355 1 207 194 0 0 chr10 46701402 46701438 -93615327 + (TG)n Simple_repeat Simple_repeat 1 36 0 250 322 0 11 chr10 46702145 46702232 -93614533 + MIR SINE MIR 34 119 -89 1556 152 4 11 chr10 46703032 46703295 -93613470 - L1PA13 LINE L1 -2 6161 5899 2273 110 0 3 chr10 46703295 46703596 -93613169 - AluSx SINE Alu -12 300 1 267 79 0 0 chr10 46705242 46705280 -93611485 + (TG)n Simple_repeat Simple_repeat 1 38 0 180 0 0 0 chr10 46705286 46705306 -93611459 + (TA)n Simple_repeat Simple_repeat 2 21 0 262 291 43 26 chr10 46705373 46705490 -93611275 - MIR SINE MIR -56 206 88 206 323 105 0 chr10 46705698 46705822 -93610943 + MIR SINE MIR 48 184 -78 263 343 60 10 chr10 46706399 46706600 -93610165 + MIR SINE MIR 20 230 -32 451 258 63 64 chr10 46706891 46707338 -93609427 + LTR33 LTR ERVL 22 508 -13 1060 224 95 68 chr10 46707470 46707976 -93608789 - MER39 LTR ERV1 -21 686 1 799 271 50 5 chr10 46708097 46708318 -93608447 - MIR SINE MIR -1 261 31 2132 93 3 13 chr10 46709755 46710056 -93606709 + AluY SINE Alu 1 298 -13 267 276 116 40 chr10 46710595 46710846 -93605919 + L1ME LINE L1 5362 5629 -533 269 218 18 0 chr10 46713303 46713358 -93603407 - MER5A DNA MER1_type -121 68 13 1047 149 47 158 chr10 46715431 46715793 -93600972 + MER33 DNA MER1_type 2 323 -1 378 229 162 38 chr10 46716638 46716848 -93599917 - LTR33 LTR ERVL -41 480 245 284 229 48 24 chr10 46716954 46717037 -93599728 - LTR33 LTR ERVL -413 108 24 974 225 38 9 chr10 46717347 46717560 -93599205 + MER20 DNA MER1_type 1 219 0 182 274 32 0 chr10 46718148 46718210 -93598555 - L2 LINE L2 -653 2661 2598 2073 145 26 50 chr10 46719034 46719076 -93597689 - MLT2D LTR ERVL 0 414 373 216 67 0 0 chr10 46719076 46719106 -93597659 + (TG)n Simple_repeat Simple_repeat 2 31 0 2073 145 26 50 chr10 46719106 46719483 -93597282 - MLT2D LTR ERVL -41 373 5 628 271 68 36 chr10 46719497 46719778 -93596987 - LTR16A LTR ERVL -10 440 151 279 238 12 36 chr10 46719848 46719932 -93596833 + MIR SINE MIR 80 161 -101 1131 255 79 142 chr10 46720440 46721817 -93594948 - L2 LINE L2 -312 3001 1714 589 280 136 81 chr10 46721842 46722395 -93594370 - L2 LINE L2 -1867 1447 865 468 241 57 25 chr10 46722445 46722603 -93594162 + Charlie7 DNA MER1_type 2449 2611 -1 801 153 32 13 chr10 46722696 46722853 -93593912 - LTR37A LTR ERV1 0 426 267 516 175 9 26 chr10 46722845 46722959 -93593806 - LTR37A LTR ERV1 -311 115 4 * 23 0 0 0 chr10 46723244 46723267 -93593498 + AT_rich Low_complexity Low_complexity 1 23 0 753 152 30 23 chr10 46724227 46724359 -93592406 - FLAM_A SINE Alu 0 133 1 676 292 32 11 chr10 46725370 46725555 -93591210 - L3 LINE CR1 -36 1541 1353 364 332 128 5 chr10 46726491 46726702 -93590063 + MIR SINE MIR 20 256 -6 281 355 81 8 chr10 46727833 46727957 -93588808 + L2 LINE L2 2225 2357 -957 295 294 25 71 chr10 46730228 46730469 -93586296 - MIR SINE MIR -11 251 21 331 291 83 31 chr10 46731262 46731393 -93585372 - MIR SINE MIR -83 179 36 233 300 0 0 chr10 46732396 46732456 -93584309 + MIR SINE MIR 46 105 -157 187 206 73 15 chr10 46732421 46732489 -93584276 + L2 LINE L2 2168 2239 -1075 * 2352 74 0 0 chr10 46733265 46733562 -93583203 + AluY SINE Alu 1 297 -14 360 111 0 0 chr10 46734165 46734219 -93582546 + (TG)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 46734863 46734904 -93581861 + (CA)n Simple_repeat Simple_repeat 2 42 0 433 295 57 44 chr10 46735312 46735627 -93581138 + L1ME4a LINE L1 5552 5870 -251 530 272 71 12 chr10 46736480 46736649 -93580116 - MER5A DNA MER1_type -10 179 1 332 308 0 8 chr10 46736804 46736924 -93579841 + L1MD1 LINE L1 4534 4652 -1494 21 89 0 0 chr10 46736924 46736980 -93579785 + AT_rich Low_complexity Low_complexity 1 56 0 3502 201 49 20 chr10 46736981 46738313 -93578452 + L1MD1 LINE L1 4640 6014 -228 288 290 102 32 chr10 46738532 46738718 -93578047 + MLT1L LTR MaLR 410 608 -7 2262 88 0 3 chr10 46738902 46739199 -93577566 + AluSq SINE Alu 1 296 -17 761 310 27 27 chr10 46739426 46739758 -93577007 + MLT1I LTR MaLR 78 409 0 411 280 178 0 chr10 46739771 46739889 -93576876 - MIR3 SINE MIR -67 141 3 1313 217 75 20 chr10 46739977 46740322 -93576443 - MER74A LTR ERVL -70 488 125 280 206 21 62 chr10 46740317 46740414 -93576351 + MER74B LTR ERVL 444 536 -86 * 3630 188 61 4 chr10 46740857 46741545 -93575220 + MER50 LTR ERV1 8 734 0 244 379 131 0 chr10 46742042 46742187 -93574578 - MER91A DNA MER1_type -32 164 1 283 278 52 31 chr10 46742989 46743086 -93573679 - L2 LINE L2 -6 3266 3168 947 208 75 112 chr10 46743738 46744113 -93572652 + MLT1A1 LTR MaLR 5 365 0 364 287 26 9 chr10 46744674 46744789 -93571976 - MIR SINE MIR -60 148 32 2153 171 57 33 chr10 46745194 46745235 -93571530 + MSTB1 LTR MaLR 1 40 -392 2159 92 0 0 chr10 46745235 46745541 -93571224 + AluSx SINE Alu 1 306 0 2153 171 57 33 chr10 46745541 46745920 -93570845 + MSTB1 LTR MaLR 40 432 0 342 276 60 35 chr10 46747251 46747367 -93569398 - L2 LINE L2 -4 3309 3191 238 220 0 110 chr10 46747378 46747469 -93569296 - L2 LINE L2 -914 2400 2320 358 282 33 44 chr10 46747654 46747835 -93568930 - L2 LINE L2 -985 2329 2151 894 261 153 31 chr10 46747946 46748428 -93568337 - L2 LINE L2 -1582 1732 1192 251 255 117 32 chr10 46748438 46748532 -93568233 + MIR SINE MIR 161 262 0 674 253 40 0 chr10 46748932 46749106 -93567659 - MIR SINE MIR 0 262 82 873 251 23 46 chr10 46749192 46749411 -93567354 + MIR SINE MIR 13 226 -36 488 253 30 60 chr10 46750033 46750199 -93566566 - MER5B DNA MER1_type -1 177 17 500 223 21 75 chr10 46750223 46750411 -93566354 - MER5B DNA MER1_type 0 178 1 322 268 116 0 chr10 46750651 46750763 -93566002 - MIR SINE MIR -46 216 92 786 175 27 71 chr10 46750803 46750866 -93565899 - MER5B DNA MER1_type 0 178 114 2245 106 0 0 chr10 46750866 46751169 -93565596 + AluSc SINE Alu 1 303 -6 786 175 27 71 chr10 46751169 46751288 -93565477 - MER5B DNA MER1_type -64 114 4 323 251 84 94 chr10 46751429 46751632 -93565133 - L2 LINE L2 -9 3304 3104 2317 226 40 18 chr10 46751642 46752410 -93564355 - L1ME LINE L1 -623 5612 4835 1338 233 74 0 chr10 46752409 46752816 -93563949 + L1M4 LINE L1 4087 4523 -1623 * 2798 191 74 154 chr10 46752819 46753398 -93563367 - L1MEc LINE L1 -2392 3823 3199 933 184 46 10 chr10 46753406 46753602 -93563163 - MER3 DNA MER1_type 0 209 7 * 2798 191 74 154 chr10 46753447 46755028 -93561737 - L1MEc LINE L1 -3016 3199 1847 2611 181 24 2 chr10 46755072 46755569 -93561196 - L1MC2 LINE L1 -26 6318 5811 1329 152 0 68 chr10 46755583 46755833 -93560932 - LTR47B LTR ERVL 0 443 211 1289 187 24 63 chr10 46755865 46756197 -93560568 - L1PBa LINE L1 -5823 1040 722 2033 219 22 0 chr10 46756243 46756658 -93560107 - L1PBa LINE L1 -6284 579 156 1078 236 7 7 chr10 46756661 46756945 -93559820 - L1MC2 LINE L1 -816 5330 5047 1527 213 112 19 chr10 46756947 46757374 -93559391 + MLT1C LTR MaLR 1 467 0 3293 179 62 24 chr10 46757375 46758052 -93558713 + MLT1C-int LTR MaLR 2 704 -667 1734 163 41 89 chr10 46758046 46758438 -93558327 + MLT1C-int LTR MaLR 999 1371 0 * 681 250 75 11 chr10 46758479 46758667 -93558098 + MLT1C LTR MaLR 268 467 0 2282 239 62 16 chr10 46758667 46759426 -93557339 - L1MC2 LINE L1 -1097 5049 4256 2143 110 0 3 chr10 46759435 46759726 -93557039 - AluSx SINE Alu -22 290 1 1111 211 112 28 chr10 46759846 46760202 -93556563 - L1MC2 LINE L1 -1879 4267 3882 306 293 123 9 chr10 46760230 46760336 -93556429 + L2 LINE L2 3147 3264 -8 198 0 0 0 chr10 46760834 46760856 -93555909 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1440 249 127 66 chr10 46761959 46762473 -93554292 - MER68 LTR ERV1 -17 545 1 604 259 60 37 chr10 46762807 46763111 -93553654 + LTR45 LTR ERV1 305 525 0 395 156 10 62 chr10 46763767 46763863 -93552902 - L1M4 LINE L1 -1934 4212 4122 226 309 113 65 chr10 46764915 46765083 -93551682 - L2 LINE L2 -14 3258 3083 1821 151 0 35 chr10 46765921 46766232 -93550533 - AluJo SINE Alu -12 300 1 953 231 62 75 chr10 46766264 46766728 -93550037 - LTR37B LTR ERV1 0 468 11 1668 166 43 0 chr10 46766735 46767013 -93549752 - AluJb SINE Alu -17 295 6 351 0 0 0 chr10 46767394 46767433 -93549332 + (TG)n Simple_repeat Simple_repeat 2 40 0 194 277 134 8 chr10 46767923 46768042 -93548723 - MER5A DNA MER1_type -1 188 55 358 147 9 129 chr10 46768107 46768223 -93548542 - L1ME4a LINE L1 0 6121 6020 1685 156 78 31 chr10 46768499 46768884 -93547881 - L1MA9 LINE L1 0 6312 5910 * 2834 168 23 29 chr10 46768870 46769761 -93547004 - L1M4 LINE L1 -1154 4992 4139 418 128 0 2 chr10 46769758 46769829 -93546936 - L1M4 LINE L1 -1955 4191 4120 * 2084 176 81 8 chr10 46769829 46770226 -93546539 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr10 46770238 46770260 -93546505 + AT_rich Low_complexity Low_complexity 1 22 0 496 161 62 9 chr10 46770260 46770372 -93546393 + LTR37A LTR ERV1 309 426 0 3712 129 15 32 chr10 46770470 46770652 -93546113 - L1PA16 LINE L1 -5 6161 5977 2316 94 3 22 chr10 46770652 46770970 -93545795 - AluSx SINE Alu 0 312 1 3712 129 15 32 chr10 46770970 46771540 -93545225 - L1PA16 LINE L1 -189 5977 5254 978 193 14 14 chr10 46771544 46771751 -93545014 - L1PA16 LINE L1 -2465 3681 3475 1890 136 7 0 chr10 46771757 46772044 -93544721 + Tigger1 DNA MER2_type 1408 1696 -722 378 176 0 40 chr10 46772041 46772115 -93544650 + Tigger7 DNA MER2_type 2416 2486 -1 * 2728 262 125 49 chr10 46772116 46773275 -93543490 - L1MEc LINE L1 -4390 2006 662 2232 104 13 3 chr10 46773275 46773582 -93543183 - AluSg SINE Alu 0 310 1 2728 262 125 49 chr10 46773582 46774201 -93542564 - L1MEc LINE L1 -5734 662 92 250 301 97 45 chr10 46774428 46774697 -93542068 - L1M4 LINE L1 -2535 3611 3329 319 0 0 0 chr10 46774737 46774772 -93541993 - U2 snRNA snRNA -153 35 1 279 212 106 68 chr10 46774852 46775144 -93541621 - L1M4 LINE L1 -2929 3217 2915 237 83 0 0 chr10 46777029 46777065 -93539700 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 974 118 0 35 chr10 46777343 46777487 -93539278 - AluSq/x SINE Alu -174 139 1 219 290 116 0 chr10 46777526 46777595 -93539170 - MIR SINE MIR -94 114 38 277 219 22 66 chr10 46778251 46778388 -93538377 + L1M4 LINE L1 2860 2990 -3156 21 0 0 0 chr10 46779766 46779787 -93536978 + AT_rich Low_complexity Low_complexity 1 21 0 190 320 110 90 chr10 46780063 46780507 -93536258 - L2 LINE L2 -8 3264 2812 22 0 0 0 chr10 46782430 46782452 -93534313 + AT_rich Low_complexity Low_complexity 1 22 0 310 250 10 40 chr10 46782484 46782584 -93534181 + L1MC4 LINE L1 6607 6703 -1339 322 244 0 26 chr10 46782635 46782713 -93534052 - L3 LINE CR1 -11 1566 1491 21 0 0 0 chr10 46782828 46782849 -93533916 + AT_rich Low_complexity Low_complexity 1 21 0 1406 228 103 1 chr10 46782869 46783380 -93533385 - L1ME1 LINE L1 -24 6142 5555 2508 279 105 42 chr10 46783402 46784985 -93531780 - L1MCc LINE L1 -4918 1505 17 30 0 0 0 chr10 46784988 46785018 -93531747 + AT_rich Low_complexity Low_complexity 1 30 0 243 232 12 73 chr10 46785035 46785117 -93531648 - MER90 LTR ERV1 -498 77 1 811 266 139 17 chr10 46785188 46785645 -93531120 + L1ME LINE L1 5243 5771 -391 32 17 0 52 chr10 46785952 46786010 -93530755 + AT_rich Low_complexity Low_complexity 1 55 0 23 33 0 0 chr10 46786225 46786255 -93530510 + AT_rich Low_complexity Low_complexity 1 30 0 300 203 0 0 chr10 46786280 46786345 -93530420 - L1ME LINE L1 -305 5816 5752 249 322 11 11 chr10 46786402 46786489 -93530276 - L1ME LINE L1 -2160 5648 5562 1118 114 0 0 chr10 46786493 46786642 -93530123 - AluSg SINE Alu -161 149 1 672 253 45 7 chr10 46787447 46787601 -93529164 - MLT2F LTR ERVL -503 160 1 479 287 42 0 chr10 46787601 46787744 -93529021 - ERVL-F LTR ERVL -8 5756 5608 1041 227 40 11 chr10 46787824 46788101 -93528664 - ERVL-F LTR ERVL -320 5444 5160 3268 218 29 56 chr10 46788326 46789383 -93527382 - L1M4 LINE L1 -1634 4512 3484 1608 152 12 0 chr10 46789456 46789706 -93527059 - MLT1B LTR MaLR -71 319 67 1231 245 75 22 chr10 46789728 46790164 -93526601 - L1M4 LINE L1 -2655 3491 3019 1407 199 84 19 chr10 46790164 46790485 -93526280 - MER2 DNA MER2_type 0 344 3 1231 245 75 22 chr10 46790485 46790595 -93526170 - L1M4 LINE L1 -3127 3019 2916 842 162 24 6 chr10 46790594 46790761 -93526004 + L1MC3 LINE L1 6914 7083 -702 * 334 289 0 10 chr10 46790763 46790867 -93525898 + MLT1F1 LTR MaLR 24 126 -441 2719 184 32 5 chr10 46790868 46791449 -93525316 + L1MC3 LINE L1 6143 6338 -6 267 262 0 0 chr10 46791451 46791512 -93525253 - L1M4 LINE L1 -3214 2932 2872 314 167 12 0 chr10 46791525 46791609 -93525156 - L1MB2 LINE L1 -3 6168 6084 9339 214 47 27 chr10 46791632 46792770 -93523995 - L1MCa LINE L1 -1055 5886 4773 1631 133 48 58 chr10 46792770 46793064 -93523701 + AluSq SINE Alu 1 291 -22 9339 214 47 27 chr10 46793064 46795391 -93521374 - L1MCa LINE L1 -2168 4773 2343 1052 278 22 50 chr10 46795457 46796051 -93520714 - L1MCa LINE L1 -5052 1889 1313 3715 156 68 0 chr10 46796081 46796757 -93520008 + Tigger7 DNA MER2_type 13 2487 0 1129 234 151 8 chr10 46796778 46797149 -93519616 - L1MCa LINE L1 -5137 1286 863 21 0 0 0 chr10 46797825 46797846 -93518919 + AT_rich Low_complexity Low_complexity 1 21 0 342 300 41 29 chr10 46798662 46798832 -93517933 - MLT1L LTR MaLR -21 594 423 273 277 20 0 chr10 46799554 46799655 -93517110 - L1M4 LINE L1 -3286 2860 2758 23 0 0 0 chr10 46800856 46800879 -93515886 + AT_rich Low_complexity Low_complexity 1 23 0 297 174 82 42 chr10 46800910 46801028 -93515737 - L1P4 LINE L1 -369 5752 5636 243 293 66 18 chr10 46801045 46801212 -93515553 - L1MC/D LINE L1 -2318 5490 5316 2241 63 16 28 chr10 46801212 46801529 -93515236 - AluSq SINE Alu 0 313 1 267 258 129 16 chr10 46801774 46801898 -93514867 - L1MC/D LINE L1 -1095 5051 4914 189 333 58 23 chr10 46802219 46802306 -93514459 - MER5B DNA MER1_type 0 178 89 274 406 86 23 chr10 46802511 46802767 -93513998 + L2 LINE L2 2989 3260 -12 432 271 49 7 chr10 46803867 46804011 -93512754 - MIR SINE MIR -48 214 65 1064 106 25 0 chr10 46805796 46805957 -93510808 + MSTA LTR MaLR 1 165 -263 252 303 71 39 chr10 46807507 46807662 -93509103 - MIR SINE MIR -80 182 23 538 152 128 8 chr10 46808787 46808912 -93507853 - MER96B DNA MER1_type? 0 417 278 743 256 58 26 chr10 46808913 46809374 -93507391 - MLT1D LTR MaLR 0 505 2 346 296 83 8 chr10 46811965 46812097 -93504668 + L1ME3A LINE L1 5713 5854 -316 3730 171 31 29 chr10 46812125 46812898 -93503867 + L1MB3 LINE L1 5394 6168 -15 311 220 24 95 chr10 46813072 46813240 -93503525 - MER96B DNA MER1_type? -249 168 13 281 297 144 0 chr10 46813908 46814026 -93502739 + MIR SINE MIR 20 154 -108 216 290 0 0 chr10 46814152 46814221 -93502544 + MIR SINE MIR 70 139 -69 29 47 0 0 chr10 46814431 46814474 -93502291 + GC_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr10 46814639 46814675 -93502090 + GC_rich Low_complexity Low_complexity 1 36 0 986 239 14 5 chr10 46817355 46817568 -93499197 - MER58A DNA MER1_type 0 224 10 268 188 241 0 chr10 46818395 46818507 -93498258 - MIR SINE MIR -26 236 98 587 286 111 74 chr10 46818985 46819391 -93497374 - MLT1J2 LTR MaLR -3 447 27 385 352 25 6 chr10 46820382 46820544 -93496221 - MER112 DNA MER1_type -11 249 85 201 125 0 0 chr10 46821312 46821344 -93495421 - L2 LINE L2 -20 3252 3221 1190 198 75 39 chr10 46821786 46822145 -93494620 - MLT1C LTR MaLR -1 466 95 2516 23 0 23 chr10 46823099 46823405 -93493360 - AluYa5 SINE Alu -12 299 1 29 70 0 0 chr10 46823663 46823720 -93493045 + AT_rich Low_complexity Low_complexity 1 57 0 348 303 28 28 chr10 46823772 46823917 -93492848 - MIR SINE MIR -103 159 15 2003 93 26 4 chr10 46824081 46824349 -93492416 - AluSp SINE Alu -39 274 1 624 312 66 59 chr10 46824707 46825389 -93491376 + L1ME3A LINE L1 5276 5962 -208 352 315 148 14 chr10 46825410 46825626 -93491139 + L1ME3A LINE L1 5923 6167 -3 316 333 9 9 chr10 46825630 46825744 -93491021 - MIR SINE MIR -126 136 23 262 327 46 26 chr10 46826400 46826553 -93490212 - L2 LINE L2 -21 3292 3137 1920 229 273 24 chr10 46826682 46827729 -93489036 - L2 LINE L2 -411 2903 1596 2570 227 46 47 chr10 46827729 46828605 -93488160 + L1M4 LINE L1 3702 4576 -1570 557 308 43 18 chr10 46828859 46829063 -93487702 + MIR SINE MIR 8 214 -48 221 280 53 0 chr10 46829115 46829190 -93487575 - L2 LINE L2 -2 3311 3233 3828 142 48 12 chr10 46829190 46829858 -93486907 - L1MB3 LINE L1 -58 6125 5434 803 283 114 42 chr10 46829869 46830072 -93486693 - L2 LINE L2 -302 3011 2824 2152 108 0 11 chr10 46830072 46830400 -93486365 - AluSx SINE Alu 0 325 1 2123 103 0 19 chr10 46830410 46830720 -93486045 - AluSg SINE Alu -6 304 1 803 283 114 42 chr10 46830720 46831189 -93485576 - L2 LINE L2 -497 2816 2285 23 0 0 0 chr10 46831329 46831352 -93485413 + GC_rich Low_complexity Low_complexity 1 23 0 382 236 94 0 chr10 46831692 46831798 -93484967 + MIR SINE MIR 39 154 -108 379 264 16 48 chr10 46831833 46831958 -93484807 + MIR SINE MIR 97 217 -45 340 330 55 38 chr10 46832007 46832265 -93484500 + L1M4 LINE L1 5488 5769 -409 1911 174 0 7 chr10 46832265 46832575 -93484190 + AluSx SINE Alu 1 308 -4 340 330 55 38 chr10 46832575 46832629 -93484136 + L1M4 LINE L1 5769 5821 -357 503 269 86 16 chr10 46833980 46834166 -93482599 - MIR SINE MIR -6 256 58 732 197 0 4 chr10 46834166 46834433 -93482332 + (TGGA)n Simple_repeat Simple_repeat 1 265 0 267 114 0 0 chr10 46834457 46834501 -93482264 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 2159 171 14 43 chr10 46835617 46836056 -93480709 + MSTB LTR MaLR 1 426 0 192 318 85 24 chr10 46836085 46836296 -93480469 - L2 LINE L2 -527 2787 2564 485 262 36 90 chr10 46836318 46836663 -93480102 + MLT1F LTR MaLR 16 343 -199 401 216 31 10 chr10 46836660 46836757 -93480008 + MLT1F LTR MaLR 449 547 -48 * 6041 125 2 10 chr10 46836757 46836981 -93479784 + L1PB1 LINE L1 4770 4994 -1157 2279 113 0 7 chr10 46836981 46837290 -93479475 + AluSx SINE Alu 1 307 -5 6041 125 2 10 chr10 46837290 46838428 -93478337 + L1PB1 LINE L1 4994 6119 -32 241 267 12 21 chr10 46838430 46838542 -93478223 + MLT1H1 LTR MaLR 481 555 0 210 275 101 0 chr10 46838581 46838650 -93478115 - MIR SINE MIR -22 240 165 181 241 74 19 chr10 46838892 46838946 -93477819 + MIR SINE MIR 90 146 -62 1675 229 63 138 chr10 46839113 46839984 -93476781 + MER45C DNA AcHobo 1 806 -147 487 212 73 22 chr10 46840277 46840414 -93476351 - MER45 DNA AcHobo 0 1581 1438 376 273 230 0 chr10 46840418 46840557 -93476208 + MER5A DNA MER1_type 17 187 -2 2219 93 10 17 chr10 46840682 46840984 -93475781 + AluSx SINE Alu 1 300 -12 313 353 53 29 chr10 46841005 46841212 -93475553 - MIR SINE MIR -38 224 13 204 193 35 35 chr10 46841226 46841283 -93475482 + CT-rich Low_complexity Low_complexity 3 59 0 23 68 0 0 chr10 46842449 46842493 -93474272 + AT_rich Low_complexity Low_complexity 1 44 0 785 149 65 18 chr10 46893213 46893381 -93423384 + Charlie5 DNA MER1_type 2410 2585 -27 333 338 57 5 chr10 46895197 46895407 -93421358 - MIR SINE MIR -22 240 20 282 235 12 35 chr10 46896721 46896806 -93419959 - MIR3 SINE MIR -27 181 99 414 0 0 0 chr10 46898246 46898292 -93418473 + (TG)n Simple_repeat Simple_repeat 2 47 0 466 240 32 26 chr10 46898789 46898943 -93417822 - MIR SINE MIR -79 183 29 1963 146 10 10 chr10 46899520 46899828 -93416937 - AluSx SINE Alu -4 308 1 1370 117 5 0 chr10 46900009 46900206 -93416559 + AluSq SINE Alu 112 309 -4 2981 236 51 27 chr10 46900209 46900992 -93415773 + L1ME1 LINE L1 5359 6160 -6 362 269 39 26 chr10 46901112 46901268 -93415497 + MLT1I LTR MaLR 50 207 -202 472 291 51 20 chr10 46902912 46903108 -93413657 - MIR SINE MIR -33 229 28 937 65 0 136 chr10 46903110 46903279 -93413486 + L1MA5 LINE L1 6153 6298 -2 238 150 0 0 chr10 46903299 46903339 -93413426 + L1M LINE L1 5389 5428 -693 1474 225 50 19 chr10 46903364 46904043 -93412722 + L1M4c LINE L1 2171 2875 -3507 301 289 31 23 chr10 46905246 46905374 -93411391 + MIR SINE MIR 36 164 -98 14180 200 29 21 chr10 46905680 46909333 -93407432 - L1M4c LINE L1 -830 5814 1513 891 188 125 0 chr10 46909333 46909525 -93407240 - Tigger1 DNA MER2_type -1 2417 2202 723 227 0 19 chr10 46909506 46909660 -93407105 - Tigger1 DNA MER2_type -2255 163 13 * 1160 201 27 36 chr10 46909689 46910018 -93406747 - L1M4c LINE L1 -5033 1509 1184 210 59 59 44 chr10 46910298 46910366 -93406399 + T-rich Low_complexity Low_complexity 2 70 0 207 196 0 22 chr10 46910392 46910438 -93406327 + GA-rich Low_complexity Low_complexity 5 49 0 967 219 116 36 chr10 46912557 46912918 -93403847 - MLT1J1 LTR MaLR -53 393 4 1755 194 32 45 chr10 46912975 46913378 -93403387 + MER63B DNA MER1_type 1 398 -38 381 298 68 42 chr10 46913667 46913858 -93402907 - MER91A DNA MER1_type 0 196 1 4006 229 58 43 chr10 46914112 46915310 -93401455 - L1M4c LINE L1 -5321 1221 6 656 309 112 42 chr10 46915446 46915694 -93401071 + L2 LINE L2 1831 2060 -1254 1697 220 70 5 chr10 46915694 46916066 -93400699 - MSTD LTR MaLR 0 396 1 656 309 112 42 chr10 46916066 46916274 -93400491 + L2 LINE L2 2060 2319 -995 187 242 167 15 chr10 46916509 46916575 -93400190 - L2 LINE L2 -1367 1947 1872 296 263 0 12 chr10 46917088 46917168 -93399597 - MLT1K LTR MaLR -1 587 509 290 113 0 0 chr10 46917716 46917759 -93399006 + Alu SINE Alu 1 38 -264 429 129 0 0 chr10 46918891 46918961 -93397804 + (GA)n Simple_repeat Simple_repeat 1 70 0 198 0 0 0 chr10 46919065 46919087 -93397678 + (T)n Simple_repeat Simple_repeat 1 22 0 1392 190 74 32 chr10 46919190 46919500 -93397265 + L1MB5 LINE L1 5844 6166 -8 502 218 85 61 chr10 46919980 46920145 -93396620 + MER5B DNA MER1_type 7 175 -3 316 307 126 64 chr10 46920325 46920667 -93396098 + L1M2 LINE L1 843 1205 -5644 268 277 36 24 chr10 46921434 46921517 -93395248 + MIR SINE MIR 86 169 -93 644 170 176 38 chr10 46922758 46922917 -93393848 + MER53 DNA DNA 6 186 -3 437 284 68 113 chr10 46923013 46923524 -93393241 - MLT1K LTR MaLR -61 527 40 212 122 24 0 chr10 46923619 46923660 -93393105 + GA-rich Low_complexity Low_complexity 1 42 0 901 125 5 27 chr10 46923693 46923877 -93392888 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 399 320 49 0 chr10 46924881 46925015 -93391750 + MIR SINE MIR 33 173 -63 407 349 122 0 chr10 46926256 46926428 -93390337 - MIR SINE MIR -19 243 51 749 176 93 66 chr10 46928229 46928411 -93388354 - MLT2D LTR ERVL 0 414 228 271 236 132 0 chr10 46929024 46929143 -93387622 + MIR SINE MIR 112 247 -15 937 220 5 0 chr10 46929335 46929521 -93387244 + MER5A DNA MER1_type 3 189 0 238 348 25 8 chr10 46930138 46930256 -93386509 + MIR SINE MIR 143 262 0 2913 157 36 0 chr10 46930373 46930871 -93385894 - L1MB3 LINE L1 -23 6160 5645 214 263 76 34 chr10 46931168 46931286 -93385479 + MIR SINE MIR 78 200 -62 408 210 0 0 chr10 46931477 46931558 -93385207 + MER52A LTR ERV1 1671 1751 -4 533 250 144 22 chr10 46931924 46932104 -93384661 + MIR SINE MIR 3 204 -58 1077 138 84 97 chr10 46932281 46932601 -93384164 - MER33 DNA MER1_type -4 320 5 1084 261 80 51 chr10 46932919 46933309 -93383456 + L2 LINE L2 2305 2705 -609 767 275 110 15 chr10 46933378 46933851 -93382914 + L1ME3A LINE L1 4387 4904 -1242 2119 113 0 3 chr10 46933852 46934153 -93382612 + AluSx SINE Alu 1 300 -12 1257 116 0 0 chr10 46934153 46934326 -93382439 + AluSg/x SINE Alu 134 306 -6 1677 284 44 23 chr10 46934326 46935359 -93381406 + L1ME3A LINE L1 4896 5945 -225 829 150 0 0 chr10 46935603 46935736 -93381029 - AluSq/x SINE Alu -180 133 1 212 311 0 0 chr10 46936071 46936132 -93380633 + L2 LINE L2 3253 3313 0 232 190 148 33 chr10 46937283 46937388 -93379377 + MIR SINE MIR 33 156 -86 466 121 0 12 chr10 46937992 46938075 -93378690 + AluSp/q SINE Alu 232 313 0 2303 51 7 3 chr10 46938593 46938885 -93377880 - AluY SINE Alu -18 293 1 600 339 67 10 chr10 46939070 46939383 -93377382 + L1MEc LINE L1 37 367 -6029 1806 231 87 14 chr10 46939843 46940268 -93376497 + MLT2B1 LTR ERVL 1 456 -64 267 133 0 0 chr10 46940294 46940339 -93376426 + (TA)n Simple_repeat Simple_repeat 1 45 0 1728 146 7 4 chr10 46940503 46940784 -93375981 - AluSx SINE Alu -22 290 9 2479 279 44 37 chr10 46940786 46942110 -93374655 + L1MEc LINE L1 704 2036 -4360 287 289 12 0 chr10 46942167 46942250 -93374515 - L2 LINE L2 -5 3267 3184 486 273 71 25 chr10 46942364 46942543 -93374222 - MLT1J LTR MaLR -204 270 52 406 306 108 27 chr10 46942672 46942930 -93373835 - L1ME4a LINE L1 -3 6118 5840 264 200 0 29 chr10 46944006 46944076 -93372689 + L1M4 LINE L1 4887 4954 -1192 1210 170 74 19 chr10 46944077 46944347 -93372418 - L1 LINE L1 -1277 4869 4585 1005 245 59 9 chr10 46944353 46944722 -93372043 + L1M4 LINE L1 5003 5385 -761 266 108 0 54 chr10 46944724 46944798 -93371967 + (TA)n Simple_repeat Simple_repeat 1 70 0 318 258 22 22 chr10 46944800 46944889 -93371876 - L1MC4 LINE L1 -1339 6703 6615 251 226 17 0 chr10 46944889 46944948 -93371817 - MLT1J1 LTR MaLR -345 101 52 337 193 114 11 chr10 46944995 46945083 -93371682 + L1MC4 LINE L1 6607 6703 -1339 323 223 21 43 chr10 46945102 46945196 -93371569 - L1MC4 LINE L1 -1339 6703 6612 352 165 2 60 chr10 46945198 46945701 -93371064 + (TA)n Simple_repeat Simple_repeat 1 474 0 2038 247 73 56 chr10 46945963 46946672 -93370093 + MER21B LTR ERV1 1 725 -138 225 65 0 0 chr10 46946672 46946703 -93370062 + (AATTG)n Simple_repeat Simple_repeat 1 31 0 2038 247 73 56 chr10 46946703 46946730 -93370035 + MER21B LTR ERV1 725 750 -113 321 298 46 38 chr10 46947068 46947199 -93369566 + MER91A DNA MER1_type 45 176 -20 203 202 115 77 chr10 46947636 46947740 -93369025 - MIR SINE MIR -63 145 38 940 276 46 28 chr10 46948350 46948633 -93368132 + LTR16A LTR ERVL 89 376 -74 1931 224 147 18 chr10 46948639 46949294 -93367471 - L1M4 LINE L1 -1083 5063 4325 * 4161 223 30 40 chr10 46949291 46949361 -93367404 - L1M4 LINE L1 -1525 4621 4552 2132 99 0 0 chr10 46949361 46949655 -93367110 - AluSc SINE Alu -15 294 1 4161 223 30 40 chr10 46949655 46950784 -93365981 - L1M4 LINE L1 -1594 4552 3434 1584 197 133 94 chr10 46950774 46951242 -93365523 - L1MCa LINE L1 -4278 2329 1881 * 2497 83 9 0 chr10 46951242 46951579 -93365186 - L1PB2 LINE L1 0 6151 5812 1584 197 133 94 chr10 46951579 46951927 -93364838 - L1MCa LINE L1 -4726 1881 1358 330 268 10 10 chr10 46952076 46952173 -93364592 - L1MCa LINE L1 -6310 116 20 384 252 131 0 chr10 46952331 46952438 -93364327 + L2 LINE L2 3193 3313 0 607 280 74 14 chr10 46952730 46952951 -93363814 - MIR SINE MIR -12 250 17 349 248 57 5 chr10 46953463 46953606 -93363159 + MIR3 SINE MIR 4 149 -73 1717 148 63 56 chr10 46953970 46954348 -93362417 + MLT1B LTR MaLR 7 387 -3 618 284 123 26 chr10 46954711 46955102 -93361663 + LTR16C LTR ERVL 62 490 -1 276 254 79 0 chr10 46955133 46955214 -93361551 + MIR SINE MIR 103 191 -71 263 183 32 32 chr10 46956608 46956701 -93360064 + (TGGA)n Simple_repeat Simple_repeat 3 95 0 612 267 44 3 chr10 46957256 46957487 -93359278 + MLT2F LTR ERVL 2 325 -338 200 35 35 0 chr10 46957487 46957516 -93359249 + (TG)n Simple_repeat Simple_repeat 2 31 0 612 267 44 3 chr10 46957516 46957552 -93359213 + MLT2F LTR ERVL 325 358 -305 185 239 75 45 chr10 46957607 46957674 -93359091 + L2 LINE L2 372 440 -2874 333 234 0 0 chr10 46957755 46957819 -93358946 - L2 LINE L2 0 3313 3250 449 266 13 60 chr10 46957985 46958218 -93358547 + L1MD1 LINE L1 17 238 -6304 2587 269 41 54 chr10 46958513 46960502 -93356263 + L1MD1 LINE L1 716 2838 -3987 13159 38 1 15 chr10 46960505 46962861 -93353904 + L1PA5 LINE L1 3803 6154 0 6111 229 51 67 chr10 46962875 46962962 -93353803 + L1MD1 LINE L1 2791 2878 -3766 2105 100 3 0 chr10 46962962 46963273 -93353492 + AluSp SINE Alu 1 313 0 6111 229 51 67 chr10 46963273 46965762 -93351003 + L1MD1 LINE L1 2878 5419 -1225 228 111 0 0 chr10 46965762 46965798 -93350967 + (CAA)n Simple_repeat Simple_repeat 2 37 0 6111 229 51 67 chr10 46965798 46966239 -93350526 + L1MD1 LINE L1 5419 5866 -778 595 181 0 0 chr10 46966242 46966336 -93350429 + AluS SINE Alu 2 95 -218 851 210 65 9 chr10 46966459 46966688 -93350077 - Charlie5 DNA MER1_type -138 2474 2233 292 180 225 22 chr10 46966694 46966783 -93349982 - Charlie5 DNA MER1_type -2505 107 1 455 267 57 53 chr10 46967005 46967924 -93348841 + L1M4 LINE L1 2630 3587 -3057 1044 300 141 43 chr10 46967998 46968791 -93347974 + L2 LINE L2 2100 2970 -344 2362 78 0 0 chr10 46968833 46969141 -93347624 - AluY SINE Alu -3 308 1 222 200 46 62 chr10 46969200 46969265 -93347500 - MIR SINE MIR -109 153 90 529 320 19 10 chr10 46969291 46969497 -93347268 - MLT1K LTR MaLR -309 279 72 1659 193 55 88 chr10 46969497 46970021 -93346744 + L1MD1 LINE L1 6203 6709 -31 1688 266 85 52 chr10 46970118 46970945 -93345820 - Zaphod DNA AcHobo -3155 876 23 792 240 77 18 chr10 46971640 46971861 -93344904 + MLT1H1 LTR MaLR 322 555 0 311 244 59 42 chr10 46971894 46972013 -93344752 - L2 LINE L2 -15 3298 3178 2549 46 28 31 chr10 46972182 46972507 -93344258 - LTR17 LTR ERV1 -456 324 1 2369 79 0 0 chr10 46972507 46972799 -93343966 - HERV17 LTR ERV1 0 8626 8335 309 51 0 0 chr10 46972789 46972828 -93343937 - HERV17 LTR ERV1 -1078 7548 7510 * 8892 59 1 0 chr10 46972821 46973891 -93342874 - HERV17 LTR ERV1 -2607 6019 4949 391 314 142 5 chr10 46973973 46974177 -93342588 - MIR SINE MIR -16 246 15 2199 87 3 0 chr10 46974407 46974706 -93342059 + AluY SINE Alu 1 300 -11 2502 178 79 101 chr10 46975519 46975562 -93341203 + MER63C DNA MER1_type 2 44 -1016 201 94 0 0 chr10 46975562 46975594 -93341171 + (TA)n Simple_repeat Simple_repeat 2 33 0 2502 178 79 101 chr10 46975594 46976411 -93340354 + MER63C DNA MER1_type 44 843 -87 1128 63 0 0 chr10 46976695 46976838 -93339927 + L1MA2 LINE L1 6162 6304 0 1202 188 9 0 chr10 46976858 46977071 -93339694 - MER46A DNA MER2_type -20 216 2 244 198 49 74 chr10 46978731 46978812 -93337953 - L1M3de LINE L1 -5662 991 913 374 220 158 77 chr10 46980228 46980437 -93336328 - L1 LINE L1 -1158 4988 4763 2185 84 17 3 chr10 46980455 46980754 -93336011 + AluSq SINE Alu 1 303 -10 1481 145 0 4 chr10 46980958 46981185 -93335580 - AluSx SINE Alu -86 226 1 339 237 185 37 chr10 46981206 46981341 -93335424 - L1MC5 LINE L1 -35 7926 7772 2823 239 35 16 chr10 46981355 46982125 -93334640 - L1ME2 LINE L1 -15 6149 5365 309 182 0 64 chr10 46982146 46982333 -93334432 + (TA)n Simple_repeat Simple_repeat 2 176 0 305 261 54 11 chr10 46982347 46982439 -93334326 + L1MC4 LINE L1 6614 6709 -1333 359 167 0 65 chr10 46982443 46982740 -93334025 + (TA)n Simple_repeat Simple_repeat 1 277 0 * 501 34 0 137 chr10 46982724 46982929 -93333836 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 307 276 0 13 chr10 46982944 46983020 -93333745 - L1MCa LINE L1 -4346 2080 2006 316 126 0 74 chr10 46983031 46983310 -93333455 + (TA)n Simple_repeat Simple_repeat 1 258 0 2274 239 54 17 chr10 46983598 46984248 -93332517 - L1ME1 LINE L1 -100 6066 5393 189 0 0 0 chr10 46984446 46984467 -93332298 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 234 254 136 17 chr10 46985462 46985580 -93331185 - MIR3 SINE MIR -74 134 3 208 307 169 36 chr10 46986006 46986172 -93330593 + MIR SINE MIR 64 251 -11 337 214 196 9 chr10 46986241 46986353 -93330412 - MIR SINE MIR -107 155 23 585 196 157 20 chr10 46986504 46986657 -93330108 + MER96B DNA MER1_type? 241 414 -3 218 289 70 78 chr10 46987308 46987450 -93329315 - L2 LINE L2 -959 2355 2215 273 194 306 10 chr10 46987480 46987578 -93329187 - L2 LINE L2 0 3313 3187 180 200 0 0 chr10 46987592 46987627 -93329138 - L2 LINE L2 -1099 2215 2181 384 313 28 53 chr10 46987912 46988232 -93328533 + L1ME4a LINE L1 5562 5873 -248 446 282 49 14 chr10 46988273 46988546 -93328219 + L1P5 LINE L1 5212 5493 -673 2807 6 0 0 chr10 46990397 46990708 -93326057 + AluYb8 SINE Alu 1 311 -7 1705 205 55 3 chr10 46991367 46991694 -93325071 - MLT1A1 LTR MaLR 0 365 22 237 273 141 40 chr10 46992902 46993001 -93323764 - L2 LINE L2 0 3313 3205 348 245 82 57 chr10 46993006 46993165 -93323600 + Charlie8 DNA MER1_type 17 179 -2238 339 326 43 43 chr10 46993378 46993516 -93323249 + MIR SINE MIR 14 151 -111 294 275 55 0 chr10 46995140 46995231 -93321534 - MIR SINE MIR -80 128 33 658 207 135 21 chr10 46995290 46995483 -93321282 - MIR SINE MIR -35 227 13 1443 263 68 64 chr10 46996147 46996660 -93320105 + MLT1G1 LTR MaLR 79 593 -2 2151 64 3 73 chr10 46996929 46997256 -93319509 - AluY SINE Alu -7 304 1 463 258 129 46 chr10 46998332 46998526 -93318239 + MIR SINE MIR 53 262 0 893 307 79 21 chr10 46998954 46999660 -93317105 - L1ME3A LINE L1 -250 5920 5158 446 319 92 35 chr10 47000328 47000588 -93316177 + L1M4 LINE L1 5071 5345 -801 464 261 21 26 chr10 47000703 47000904 -93315861 + L1M2 LINE L1 5491 5690 -454 227 187 8 45 chr10 47001645 47001779 -93314986 + (CA)n Simple_repeat Simple_repeat 2 130 0 456 148 11 39 chr10 47001790 47001972 -93314793 + (CA)n Simple_repeat Simple_repeat 2 178 0 374 264 110 49 chr10 47002817 47002980 -93313785 + MIR SINE MIR 15 187 -75 237 366 40 0 chr10 47002979 47003080 -93313685 - MIR SINE MIR -1 261 157 * 304 163 0 0 chr10 47003342 47003391 -93313374 - MST-int LTR MaLR -1550 101 53 305 215 0 13 chr10 47003965 47004044 -93312721 + (CA)n Simple_repeat Simple_repeat 1 78 0 330 169 0 0 chr10 47004427 47004492 -93312273 + CT-rich Low_complexity Low_complexity 4 68 0 186 413 60 0 chr10 47005057 47005258 -93311507 - MIR SINE MIR 0 262 50 187 274 94 28 chr10 47005504 47005610 -93311155 + L2 LINE L2 3152 3264 -8 268 196 0 0 chr10 47006140 47006186 -93310579 - FAM SINE Alu -17 158 113 347 179 13 26 chr10 47006403 47006481 -93310284 - MLT1J1 LTR MaLR -325 121 45 209 381 116 16 chr10 47007641 47007830 -93308935 - MIR SINE MIR -22 240 33 686 236 48 6 chr10 47007857 47008022 -93308743 + MIR SINE MIR 9 180 -82 968 259 97 32 chr10 47009196 47009598 -93307167 + LTR16C LTR ERVL 64 491 0 181 312 91 0 chr10 47011251 47011328 -93305437 - L2 LINE L2 -4 3268 3185 995 234 40 22 chr10 47011951 47012225 -93304540 - MER33 DNA MER1_type 0 324 46 506 324 35 0 chr10 47013858 47014075 -93302690 + MIR SINE MIR 33 255 -7 243 0 0 0 chr10 47014606 47014633 -93302132 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 257 256 56 0 chr10 47014635 47014725 -93302040 - L2 LINE L2 -14 3299 3205 814 203 10 51 chr10 47014877 47015074 -93301691 + MER5A DNA MER1_type 1 189 0 198 103 0 0 chr10 47015824 47015853 -93300912 + (TA)n Simple_repeat Simple_repeat 1 29 0 202 287 43 35 chr10 47015973 47016088 -93300677 - MER5A DNA MER1_type -7 182 67 1991 119 6 51 chr10 47016088 47016399 -93300366 - AluSx SINE Alu -15 297 1 442 81 95 0 chr10 47016833 47016907 -93299858 - L1MA8 LINE L1 -188 6103 6023 291 228 109 11 chr10 47017500 47017592 -93299173 - MLT1J2 LTR MaLR 0 450 350 374 291 63 15 chr10 47017628 47017793 -93298972 - MLT1J2 LTR MaLR -204 242 68 254 210 74 25 chr10 47018326 47018407 -93298358 - HAL1 LINE L1 -2337 170 86 1164 219 0 0 chr10 47018412 47018617 -93298148 - AluJo SINE Alu -107 205 1 254 393 43 0 chr10 47019129 47019269 -93297496 - MIR3 SINE MIR -15 193 48 245 268 136 77 chr10 47022225 47022564 -93294201 - L1MC4 LINE L1 -908 7134 6776 1059 93 0 0 chr10 47022648 47022788 -93293977 + AluSg/x SINE Alu 171 310 -2 216 158 0 0 chr10 47023346 47023384 -93293381 + CT-rich Low_complexity Low_complexity 2 39 0 186 279 29 59 chr10 47023839 47023907 -93292858 - L2 LINE L2 -69 3203 3138 365 293 189 19 chr10 47025688 47026047 -93290718 - L1MEd LINE L1 -2232 3897 3478 487 307 64 14 chr10 47026427 47026772 -93289993 - L1MEd LINE L1 -3181 2948 2587 579 273 111 58 chr10 47027465 47029093 -93287672 - L1MEd LINE L1 -3574 2555 819 383 274 26 9 chr10 47029624 47029737 -93287028 - MIR SINE MIR -121 141 27 198 216 82 41 chr10 47030084 47030181 -93286584 + MIR3 SINE MIR 12 112 -96 229 315 115 15 chr10 47030228 47030358 -93286407 + MIR SINE MIR 20 162 -100 289 170 39 39 chr10 47030605 47030872 -93285893 + (CA)n Simple_repeat Simple_repeat 1 267 0 340 307 8 16 chr10 47031728 47031855 -93284910 + L2 LINE L2 2935 3060 -212 247 248 0 99 chr10 47032454 47032575 -93284190 - L2 LINE L2 -164 3108 3000 314 297 66 33 chr10 47033472 47033654 -93283111 + MER5A DNA MER1_type 1 188 -1 4051 205 47 10 chr10 47033700 47035181 -93281584 - L1MB5 LINE L1 -8 6166 4629 1600 209 7 44 chr10 47035178 47035590 -93281175 - L1MB5 LINE L1 -2100 4046 3650 * 508 221 52 189 chr10 47035592 47036095 -93280670 + L2 LINE L2 2880 3313 0 1387 222 51 8 chr10 47036250 47036602 -93280163 - L1ME1 LINE L1 -18 6542 6176 * 1951 245 90 94 chr10 47036601 47038485 -93278280 - L1ME1 LINE L1 -914 5626 3797 2924 248 103 40 chr10 47038519 47040461 -93276304 - L1ME1 LINE L1 -3577 2963 930 225 340 55 74 chr10 47040971 47041283 -93275482 - L1ME1 LINE L1 -6210 330 25 267 54 0 0 chr10 47041284 47041321 -93275444 + (TG)n Simple_repeat Simple_repeat 2 38 0 204 191 24 0 chr10 47041385 47041427 -93275338 - L2 LINE L2 -12 3260 3218 236 244 50 107 chr10 47042237 47042536 -93274229 - L2 LINE L2 -121 3192 2911 295 333 37 24 chr10 47042618 47042912 -93273853 - L2 LINE L2 -578 2736 2439 387 212 138 94 chr10 47043791 47044248 -93272517 - MLT1G LTR MaLR -50 536 32 363 350 54 5 chr10 47046594 47046780 -93269985 + MIR SINE MIR 27 221 -41 310 343 29 0 chr10 47046843 47046983 -93269782 - MIR SINE MIR -48 214 71 1684 180 9 29 chr10 47047619 47047935 -93268830 + AluJo SINE Alu 1 310 -2 240 153 57 169 chr10 47048140 47048264 -93268501 - MER102a DNA MER1_type 0 330 221 353 347 78 0 chr10 47048412 47048605 -93268160 + MIR SINE MIR 18 225 -37 298 0 48 0 chr10 47050025 47050067 -93266698 + (GA)n Simple_repeat Simple_repeat 1 44 0 215 346 114 15 chr10 47050114 47050316 -93266449 - L2 LINE L2 -208 3064 2843 443 281 54 12 chr10 47052689 47052856 -93263909 + MIR SINE MIR 79 252 -10 185 330 107 10 chr10 47053014 47053117 -93263648 + L2 LINE L2 3111 3223 -49 630 237 76 0 chr10 47053397 47053595 -93263170 - LTR16A1 LTR ERVL 0 457 245 194 272 0 10 chr10 47053661 47053764 -93263001 + (TG)n Simple_repeat Simple_repeat 2 103 0 4423 10 0 0 chr10 47053856 47054347 -93262418 - L1PA2 LINE L1 0 6155 5665 1733 16 0 0 chr10 47054349 47054543 -93262222 + L1P2 LINE L1 5386 5579 -575 718 322 13 0 chr10 47055274 47055507 -93261258 - MER102a DNA MER1_type -92 238 3 906 191 6 0 chr10 47058915 47059072 -93257693 + FRAM SINE Alu 1 158 -18 609 205 184 0 chr10 47060899 47061089 -93255676 + MIR SINE MIR 26 250 -12 218 266 25 13 chr10 47061768 47061847 -93254918 - MER5A DNA MER1_type -95 94 15 536 244 12 41 chr10 47062109 47062281 -93254484 + MER5B DNA MER1_type 8 174 -4 494 198 9 69 chr10 47062305 47062421 -93254344 - MER20 DNA MER1_type -107 112 4 375 221 0 0 chr10 47062529 47062615 -93254150 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2047 128 3 0 chr10 47062618 47062907 -93253858 - AluSq SINE Alu -23 290 1 244 309 0 0 chr10 47063019 47063087 -93253678 - L2 LINE L2 -1 3312 3245 1037 271 113 19 chr10 47063181 47063613 -93253152 - MER90 LTR ERV1 -14 561 89 204 308 0 44 chr10 47063633 47063724 -93253041 + L2 LINE L2 3227 3313 0 297 289 88 9 chr10 47063893 47064007 -93252758 + L3 LINE CR1 751 873 -704 1358 203 77 21 chr10 47064438 47064764 -93252001 + MER2 DNA MER2_type 1 344 0 271 219 31 10 chr10 47064764 47064860 -93251905 + (TA)n Simple_repeat Simple_repeat 1 98 0 1419 148 26 4 chr10 47065046 47065275 -93251490 - MER7A DNA MER2_type -108 238 7 3748 191 43 59 chr10 47065299 47065846 -93250919 - L1MD2 LINE L1 -500 5859 5305 2332 111 0 0 chr10 47065846 47066153 -93250612 - AluSc SINE Alu 0 309 3 3748 191 43 59 chr10 47066153 47066166 -93250599 - L1MD2 LINE L1 -1054 5305 5293 2425 62 0 23 chr10 47066166 47066474 -93250291 - AluY SINE Alu -10 301 1 3748 191 43 59 chr10 47066474 47067615 -93249150 - L1MD2 LINE L1 -1066 5293 4170 255 61 0 0 chr10 47069093 47069126 -93247639 + (TCC)n Simple_repeat Simple_repeat 1 33 0 1160 38 0 38 chr10 47069126 47069312 -93247453 + (TTC)n Simple_repeat Simple_repeat 1 179 0 426 39 0 0 chr10 47069315 47069367 -93247398 + (TTCTCC)n Simple_repeat Simple_repeat 3 54 0 2041 128 0 4 chr10 47069369 47069650 -93247115 - AluSx SINE Alu -32 280 1 812 108 0 31 chr10 47070348 47070477 -93246288 - FLAM_A SINE Alu -1 141 17 742 258 105 0 chr10 47072528 47072757 -93244008 + MIR SINE MIR 7 259 -3 395 244 76 0 chr10 47072764 47072883 -93243882 + MIR SINE MIR 103 230 -32 26 0 0 0 chr10 47074024 47074050 -93242715 + AT_rich Low_complexity Low_complexity 1 26 0 412 328 23 0 chr10 47074430 47074558 -93242207 - L2 LINE L2 -5 3267 3137 921 313 149 24 chr10 47075572 47076622 -93240143 - L2 LINE L2 -966 2348 1167 504 105 0 0 chr10 47076652 47076728 -93240037 + (TA)n Simple_repeat Simple_repeat 2 77 0 4232 194 37 53 chr10 47077161 47078181 -93238584 + Charlie1a DNA MER1_type 2 1005 -450 564 62 21 83 chr10 47078190 47078286 -93238479 + L1PA7 LINE L1 6065 6154 0 1010 185 34 5 chr10 47078300 47078505 -93238260 - Charlie1 DNA MER1_type -373 2388 2178 1704 178 51 42 chr10 47078506 47078722 -93238043 + Charlie1 DNA MER1_type 2325 2538 -223 1573 180 62 9 chr10 47078722 47079044 -93237721 - MER44D DNA MER2_type 0 609 1 1704 178 51 42 chr10 47079044 47079260 -93237505 + Charlie1 DNA MER1_type 2538 2761 0 615 227 153 42 chr10 47079271 47079584 -93237181 + L1ME3 LINE L1 5813 6160 -2 1293 157 30 38 chr10 47080360 47080622 -93236143 + AluJb SINE Alu 1 260 -52 245 333 30 9 chr10 47081158 47081313 -93235452 + MIR SINE MIR 41 202 -60 253 239 87 0 chr10 47081495 47081587 -93235178 - L2 LINE L2 -3 3269 3170 377 325 82 25 chr10 47082066 47082420 -93234345 - L1ME4a LINE L1 -174 5947 5574 570 264 52 74 chr10 47082639 47083191 -93233574 + L1 LINE L1 2939 3478 -2668 227 329 66 22 chr10 47083287 47083424 -93233341 + L1 LINE L1 3620 3762 -2384 195 222 0 0 chr10 47083834 47083879 -93232886 + A-rich Low_complexity Low_complexity 2 46 0 2073 118 14 0 chr10 47084061 47084358 -93232407 + AluSq SINE Alu 1 301 -12 2287 110 3 0 chr10 47084448 47084748 -93232017 - AluSc SINE Alu -8 301 1 651 48 0 0 chr10 47085235 47085318 -93231447 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 2084 136 0 0 chr10 47085320 47085606 -93231159 - AluSx SINE Alu -26 286 1 220 395 0 15 chr10 47086532 47086666 -93230099 + MIR SINE MIR 20 151 -111 1418 208 60 7 chr10 47086666 47086950 -93229815 + AluJb SINE Alu 1 299 -3 248 306 54 34 chr10 47087395 47087542 -93229223 + MIR SINE MIR 45 194 -68 307 192 0 55 chr10 47088241 47088314 -93228451 - MLT1K LTR MaLR -3 585 517 216 174 0 65 chr10 47088314 47088360 -93228405 + polypurine Low_complexity Low_complexity 1 43 0 334 269 138 53 chr10 47088365 47088648 -93228117 - MLT1K LTR MaLR -62 526 220 944 201 0 42 chr10 47091331 47091545 -93225220 - MER3 DNA MER1_type 0 209 5 207 256 128 0 chr10 47091563 47091649 -93225116 - MIR SINE MIR -63 199 103 299 333 0 10 chr10 47093078 47093180 -93223585 - L2 LINE L2 -2 3311 3211 238 296 0 0 chr10 47093281 47093352 -93223413 - MIR3 SINE MIR -3 205 135 528 309 64 20 chr10 47093366 47093509 -93223256 + MIR SINE MIR 3 163 -99 423 139 13 0 chr10 47093509 47093588 -93223177 + MADE1 DNA Mariner 1 80 0 528 309 64 20 chr10 47093588 47093693 -93223072 + MIR SINE MIR 163 262 0 3304 207 42 9 chr10 47093823 47094568 -93222197 + L1MB8 LINE L1 5338 6106 -72 2729 106 21 23 chr10 47094568 47094954 -93221811 - MER1A DNA MER1_type 0 529 145 348 151 0 47 chr10 47094988 47095074 -93221691 + L1MB8 LINE L1 6097 6178 0 6295 244 63 32 chr10 47095118 47096711 -93220054 + L1MEc LINE L1 823 2365 -3850 1415 204 79 28 chr10 47096711 47097064 -93219701 + MLT1A2 LTR MaLR 4 374 0 6295 244 63 32 chr10 47097064 47099253 -93217512 + L1MEc LINE L1 2365 5363 -852 2068 117 3 7 chr10 47099256 47099538 -93217227 + AluSq SINE Alu 1 281 -32 187 143 0 0 chr10 47099861 47099896 -93216869 - MIR SINE MIR -10 252 218 180 388 20 14 chr10 47100143 47100290 -93216475 - L2 LINE L2 -598 2716 2569 196 365 79 17 chr10 47100709 47100887 -93215878 - L2 LINE L2 -1333 1981 1793 219 204 161 32 chr10 47101426 47101553 -93215212 - MIR3 SINE MIR -64 144 14 321 390 57 0 chr10 47102573 47102714 -93214051 - MER91A DNA MER1_type -47 149 1 695 292 41 8 chr10 47102970 47103213 -93213552 + MLT1I LTR MaLR 159 409 0 641 191 23 29 chr10 47103337 47103510 -93213255 + L1MD3 LINE L1 6945 7116 -879 322 206 22 33 chr10 47103510 47103602 -93213163 + MLT1F1 LTR MaLR 35 125 -442 2460 199 42 6 chr10 47103602 47104105 -93212660 + L1MD3 LINE L1 7404 7924 -71 748 205 60 12 chr10 47105377 47105543 -93211222 - MER45A DNA AcHobo -4 174 1 2218 112 0 7 chr10 47106707 47107002 -93209763 + AluSq SINE Alu 1 293 -20 1172 158 59 140 chr10 47108758 47109164 -93207601 - MLT1A2 LTR MaLR -1 373 1 375 272 98 62 chr10 47109318 47109542 -93207223 - MIR SINE MIR -16 246 15 378 0 0 0 chr10 47110281 47110323 -93206442 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 47110322 47110344 -93206421 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 1123 253 89 30 chr10 47110370 47110801 -93205964 - MLT1G1 LTR MaLR -84 446 6 786 281 99 16 chr10 47112210 47112634 -93204131 - L2 LINE L2 0 3313 2855 27 29 0 0 chr10 47113305 47113339 -93203426 + AT_rich Low_complexity Low_complexity 1 34 0 619 206 21 21 chr10 47114119 47114260 -93202505 + L1MD3 LINE L1 7837 7977 -18 625 198 20 61 chr10 47115729 47115926 -93200839 - L1MC5 LINE L1 -51 7910 7722 405 129 0 0 chr10 47117554 47117624 -93199141 + (CA)n Simple_repeat Simple_repeat 2 71 0 250 231 0 0 chr10 47117647 47117699 -93199066 + (CA)n Simple_repeat Simple_repeat 1 52 0 326 224 97 109 chr10 47118426 47118591 -93198174 - L1MCa LINE L1 -4053 2373 2211 21 0 0 0 chr10 47120975 47120996 -93195769 + AT_rich Low_complexity Low_complexity 1 21 0 2071 120 0 3 chr10 47121463 47121762 -93195003 + AluSq SINE Alu 1 298 -15 375 308 177 25 chr10 47121958 47122325 -93194440 - L2 LINE L2 -73 3240 2818 275 226 71 12 chr10 47122486 47122570 -93194195 - L2 LINE L2 -14 3258 3170 235 318 55 0 chr10 47123065 47123175 -93193590 - L2 LINE L2 0 3272 3157 266 361 42 21 chr10 47123208 47123472 -93193293 + L2 LINE L2 2691 2962 -310 2033 189 21 0 chr10 47124183 47124565 -93192200 - MLT1B LTR MaLR 0 390 1 307 264 35 104 chr10 47126529 47126673 -93190092 + L2 LINE L2 3180 3313 0 2002 136 3 0 chr10 47127506 47127816 -93188949 - AluSx SINE Alu -1 311 1 253 332 41 59 chr10 47127816 47128030 -93188735 + L2 LINE L2 1612 1821 -1493 427 353 58 27 chr10 47128715 47128939 -93187826 - MIR SINE MIR -24 238 8 322 289 89 15 chr10 47130072 47130207 -93186558 - HAL1b LINE L1 -1 1347 1203 232 168 103 129 chr10 47130595 47130750 -93186015 - L1MC/D LINE L1 -2343 5465 5315 1248 164 5 5 chr10 47130810 47131023 -93185742 - AluSg/x SINE Alu -13 297 85 615 300 222 47 chr10 47131043 47131892 -93184873 - L1 LINE L1 -2217 3929 2917 329 242 63 0 chr10 47132339 47132434 -93184331 + MIR SINE MIR 141 241 -21 217 211 19 19 chr10 47132921 47132973 -93183792 + L3b LINE CR1 1529 1580 -3 212 261 230 39 chr10 47135202 47135398 -93181367 + MIR3 SINE MIR 1 216 -11 229 318 11 11 chr10 47135774 47135862 -93180903 + MIR SINE MIR 69 156 -106 401 261 143 67 chr10 47136325 47136696 -93180069 - LTR16A1 LTR ERVL -15 442 44 194 343 56 9 chr10 47137056 47137164 -93179601 - L3 LINE CR1 -128 1449 1337 226 321 91 18 chr10 47137535 47137700 -93179065 + MIR SINE MIR 49 225 -37 453 314 79 35 chr10 47138845 47139135 -93177630 - L3 LINE CR1 -2 1575 1273 287 344 61 43 chr10 47139923 47140086 -93176679 + MIR SINE MIR 82 247 -15 1235 217 3 40 chr10 47140352 47140656 -93176109 - AluJo SINE Alu -19 293 1 6637 84 6 19 chr10 47140663 47142282 -93174483 - L1PA10 LINE L1 -5 6163 4552 252 164 27 14 chr10 47143513 47143586 -93173179 + CT-rich Low_complexity Low_complexity 2 75 0 342 284 120 27 chr10 47145041 47145375 -93171390 - L2 LINE L2 -94 3219 2855 26 0 0 0 chr10 47146052 47146078 -93170687 + AT_rich Low_complexity Low_complexity 1 26 0 197 365 32 42 chr10 47146408 47146597 -93170168 - L3 LINE CR1 -193 1384 1198 600 230 153 42 chr10 47146877 47147190 -93169575 - L1ME3A LINE L1 -2 6160 5813 1665 180 51 42 chr10 47147201 47147417 -93169348 - Charlie1 DNA MER1_type 0 2761 2548 1547 180 62 9 chr10 47147417 47147739 -93169026 + MER44D DNA MER2_type 1 609 0 1665 180 51 42 chr10 47147739 47147955 -93168810 - Charlie1 DNA MER1_type -213 2548 2325 985 190 34 5 chr10 47147956 47148161 -93168604 + Charlie1 DNA MER1_type 2178 2388 -373 288 143 0 0 chr10 47149104 47149160 -93167605 + (TG)n Simple_repeat Simple_repeat 2 57 0 457 257 67 55 chr10 47149365 47149618 -93167147 - L1ME4a LINE L1 -234 5887 5632 749 304 47 47 chr10 47150346 47150708 -93166057 - L2 LINE L2 -824 2490 2129 184 121 30 0 chr10 47150952 47150985 -93165780 + CT-rich Low_complexity Low_complexity 4 37 0 392 104 0 60 chr10 47151661 47151728 -93165037 - THE1C LTR MaLR -312 63 1 7773 235 30 27 chr10 47151736 47154118 -93162647 - L1ME4a LINE L1 -1025 5121 2734 1958 108 4 0 chr10 47154527 47154870 -93161895 + AluSx SINE Alu 16 359 0 203 292 255 10 chr10 47155214 47155406 -93161359 + MIR SINE MIR 20 258 -4 380 281 36 36 chr10 47157525 47157664 -93159101 - MLT1K LTR MaLR -1 587 449 282 291 82 27 chr10 47157763 47157873 -93158892 - MLT1K LTR MaLR -422 166 51 1259 193 16 78 chr10 47157904 47158226 -93158539 + AluJo SINE Alu 1 302 0 2153 75 7 7 chr10 47158588 47158883 -93157882 - AluY SINE Alu -16 295 1 1441 178 3 25 chr10 47159122 47159408 -93157357 - AluJo SINE Alu -15 297 18 297 288 15 45 chr10 47159555 47159687 -93157078 - MIR SINE MIR -17 245 118 272 333 175 11 chr10 47159970 47160147 -93156618 + MIR SINE MIR 31 236 -26 269 227 182 38 chr10 47160172 47160304 -93156461 - Tigger8 DNA MER2_type -347 319 169 315 312 55 0 chr10 47160527 47160636 -93156129 - MIR3 SINE MIR -2 206 92 28 0 0 0 chr10 47162303 47162331 -93154434 + AT_rich Low_complexity Low_complexity 1 28 0 35 24 0 0 chr10 47162843 47162885 -93153880 + AT_rich Low_complexity Low_complexity 1 42 0 1773 167 0 0 chr10 47163082 47163369 -93153396 - AluJb SINE Alu -25 287 1 376 338 127 26 chr10 47163965 47164193 -93152572 + MIR SINE MIR 12 262 0 228 214 136 48 chr10 47164198 47164301 -93152464 + L1ME4a LINE L1 6008 6119 -2 633 253 101 0 chr10 47165011 47165189 -93151576 - MER115 DNA AcHobo -10 683 488 798 309 61 0 chr10 47165230 47165508 -93151257 - MER115 DNA AcHobo -285 408 114 407 368 67 5 chr10 47165567 47165790 -93150975 + MIR SINE MIR 23 259 -3 709 238 0 0 chr10 47166849 47166992 -93149773 + MER20 DNA MER1_type 1 143 -76 962 262 71 47 chr10 47167145 47167679 -93149086 - MLT1E2 LTR MaLR 0 626 80 206 330 20 40 chr10 47170090 47170134 -93146631 - MIR SINE MIR -60 202 159 2160 179 67 8 chr10 47170134 47170536 -93146229 - MSTB LTR MaLR 0 426 1 206 330 20 40 chr10 47170536 47170591 -93146174 - MIR SINE MIR -103 159 105 198 0 0 0 chr10 47171043 47171065 -93145700 + (TG)n Simple_repeat Simple_repeat 2 23 0 305 302 0 18 chr10 47172121 47172290 -93144475 + (CA)n Simple_repeat Simple_repeat 2 167 0 258 281 125 116 chr10 47172353 47172673 -93144092 + L2 LINE L2 2950 3272 0 582 293 18 18 chr10 47172763 47172930 -93143835 + MER5A DNA MER1_type 7 173 -16 189 0 0 0 chr10 47173370 47173391 -93143374 + (TC)n Simple_repeat Simple_repeat 2 22 0 321 68 0 0 chr10 47173393 47173437 -93143328 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 266 196 0 0 chr10 47173803 47173849 -93142916 + MIR SINE MIR 106 151 -57 182 395 35 0 chr10 47173849 47173935 -93142830 - MIR3 SINE MIR -3 205 117 2008 184 47 21 chr10 47173999 47174385 -93142380 + MSTD LTR MaLR 1 396 0 1119 237 53 58 chr10 47175037 47175153 -93141612 + L1MC4a LINE L1 5535 5650 -471 2476 64 0 3 chr10 47175153 47175451 -93141314 + AluY SINE Alu 1 297 -14 1119 237 53 58 chr10 47175451 47175815 -93140950 + L1MC4a LINE L1 5650 6017 -104 3560 38 0 2 chr10 47177520 47177946 -93138819 - L1P LINE L1 -1254 4892 4468 984 126 19 0 chr10 47177946 47178105 -93138660 - HSMAR2 DNA Mariner -1139 163 2 387 293 14 14 chr10 47178731 47178878 -93137887 + G-rich Low_complexity Low_complexity 3 149 0 412 208 176 24 chr10 47179885 47180010 -93136755 - MER5B DNA MER1_type -28 150 7 184 171 0 0 chr10 47180064 47180099 -93136666 - MIR SINE MIR -6 256 222 343 222 11 22 chr10 47180133 47180223 -93136542 - MIR SINE MIR -119 143 55 4876 139 13 41 chr10 47180852 47181721 -93135044 + MER4B-int LTR ERV1 3 846 -5912 1141 138 33 6 chr10 47181730 47181911 -93134854 + AluJo SINE Alu 1 186 -126 209 227 0 0 chr10 47182642 47182686 -93134079 + T-rich Low_complexity Low_complexity 1 44 0 2099 108 0 4 chr10 47183242 47183520 -93133245 - AluSx SINE Alu -35 277 1 1976 259 25 57 chr10 47183523 47184057 -93132708 + L1MC4a LINE L1 6103 6608 -1200 264 100 0 0 chr10 47184057 47184097 -93132668 + (TG)n Simple_repeat Simple_repeat 1 40 0 1976 259 25 57 chr10 47184097 47184315 -93132450 + L1MC4a LINE L1 6608 6831 -977 1725 259 146 22 chr10 47184342 47185075 -93131690 + L1MC4 LINE L1 7095 7918 -124 34 55 0 0 chr10 47185099 47185154 -93131611 + AT_rich Low_complexity Low_complexity 1 55 0 1611 84 140 45 chr10 47186222 47186410 -93130355 - MER4B LTR ERV1 -295 315 89 1678 184 13 7 chr10 47186410 47186714 -93130051 - AluJb SINE Alu -4 308 3 1611 84 140 45 chr10 47186714 47186811 -93129954 - MER4B LTR ERV1 -521 89 3 1738 213 38 38 chr10 47186813 47186846 -93129919 + L1ME1 LINE L1 4818 4850 -1296 2393 70 3 3 chr10 47186846 47187145 -93129620 - AluY SINE Alu -11 300 2 1738 213 38 38 chr10 47187145 47187591 -93129174 + L1ME1 LINE L1 4849 5297 -849 1641 186 0 3 chr10 47187623 47187928 -93128837 + AluJb SINE Alu 1 304 0 2114 211 65 44 chr10 47187935 47188507 -93128258 + L1ME1 LINE L1 5469 6052 -114 2224 97 27 3 chr10 47188874 47189174 -93127591 - AluSg SINE Alu -3 307 1 302 256 31 113 chr10 47189232 47189392 -93127373 - L1MC4 LINE L1 -59 7983 7837 2022 231 45 12 chr10 47189565 47190050 -93126715 + L1ME LINE L1 5299 5799 -365 1009 118 0 0 chr10 47190050 47190185 -93126580 - AluSq/x SINE Alu -176 136 2 232 241 0 0 chr10 47190428 47190482 -93126283 + L1ME LINE L1 5757 5810 -311 25 0 0 0 chr10 47190546 47190571 -93126194 + AT_rich Low_complexity Low_complexity 1 25 0 497 81 0 0 chr10 47190914 47190976 -93125789 - Alu SINE Alu -255 63 2 279 198 99 25 chr10 47190983 47191064 -93125701 - L1MC5 LINE L1 -32 7929 7843 2199 114 10 0 chr10 47191072 47191362 -93125403 + AluSx SINE Alu 14 306 -6 4939 148 45 30 chr10 47191535 47192428 -93124337 - L1MC2 LINE L1 -109 6235 5325 2289 118 0 0 chr10 47192428 47192724 -93124041 - AluSg SINE Alu -14 296 1 4939 148 45 30 chr10 47192724 47192794 -93123971 - L1MC2 LINE L1 -1019 5325 5258 1845 162 10 3 chr10 47192798 47193106 -93123659 - AluSx SINE Alu -2 310 1 1245 138 0 0 chr10 47193121 47193295 -93123470 - AluJb SINE Alu -137 175 2 623 226 28 47 chr10 47193317 47193529 -93123236 - L1MC2 LINE L1 -1015 5131 4924 641 132 0 0 chr10 47193560 47193651 -93123114 + AluS SINE Alu 2 92 -220 1022 143 80 42 chr10 47193776 47194013 -93122752 - L1ME2 LINE L1 -217 5947 5702 381 228 65 0 chr10 47194005 47194097 -93122668 - L1MC2 LINE L1 -2120 4026 3929 * 994 194 22 78 chr10 47194264 47194532 -93122233 - L1MB8 LINE L1 -41 6137 5885 1151 136 6 0 chr10 47194532 47194708 -93122057 - AluJb SINE Alu -17 295 119 3174 182 30 3 chr10 47194714 47195523 -93121242 - L1MB8 LINE L1 -311 5867 5039 3381 138 5 27 chr10 47195564 47196121 -93120644 - L1MB3 LINE L1 -19 6164 5620 1897 124 50 3 chr10 47196144 47196427 -93120338 + AluSp SINE Alu 1 296 -17 898 215 82 43 chr10 47196459 47196738 -93120027 - L1MB3 LINE L1 -1073 5073 4784 3529 234 55 20 chr10 47196951 47198082 -93118683 + L1M4 LINE L1 2269 3438 -2708 2749 113 13 42 chr10 47198088 47198245 -93118520 - L1MC1 LINE L1 -298 6035 5875 2233 121 3 0 chr10 47198245 47198550 -93118215 - AluSx SINE Alu -6 306 1 2749 113 13 42 chr10 47198550 47198850 -93117915 - L1MC1 LINE L1 -458 5875 5591 2018 225 100 41 chr10 47198857 47199197 -93117568 + L1M4 LINE L1 3452 3770 -2376 1280 183 99 35 chr10 47199197 47199481 -93117284 - AluJo SINE Alu -10 302 1 2018 225 100 41 chr10 47199481 47199897 -93116868 + L1M4 LINE L1 3770 4253 -1893 405 222 22 0 chr10 47200353 47200488 -93116277 + CT-rich Low_complexity Low_complexity 1 138 0 237 359 113 38 chr10 47201892 47202051 -93114714 - L2 LINE L2 -87 3185 3015 265 231 0 0 chr10 47202061 47202113 -93114652 + LTR30 LTR ERV1 1 52 -670 2375 118 148 0 chr10 47202113 47202486 -93114279 + LTR12 LTR ERV1 53 480 -234 347 250 62 56 chr10 47202668 47202828 -93113937 + MIR3 SINE MIR 36 196 -12 1502 171 8 8 chr10 47203485 47203742 -93113023 + AluJo SINE Alu 10 266 -46 471 234 32 90 chr10 47205886 47205967 -93110798 + MER104 DNA MER2_type 4 88 -1810 2418 99 3 0 chr10 47205967 47206279 -93110486 + AluSq SINE Alu 1 313 0 471 234 32 90 chr10 47206279 47206385 -93110380 + MER104 DNA MER2_type 88 180 0 277 350 41 16 chr10 47206390 47206513 -93110252 - L2 LINE L2 -25 3247 3122 466 236 132 16 chr10 47206579 47206761 -93110004 - L1MC5 LINE L1 -53 7908 7706 1364 216 34 34 chr10 47206803 47207131 -93109634 + L1MDa LINE L1 18 345 -6195 412 183 12 0 chr10 47207140 47207222 -93109543 + L1MDa LINE L1 1928 2010 -4530 180 0 0 0 chr10 47207222 47207242 -93109523 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 6461 201 69 57 chr10 47207795 47208340 -93108425 + L1MDa LINE L1 1994 2531 -4207 1983 134 14 0 chr10 47208340 47208623 -93108142 + AluSc SINE Alu 1 287 -22 6461 201 69 57 chr10 47208623 47209643 -93107122 + L1MDa LINE L1 2531 3537 -3201 1779 177 3 3 chr10 47209643 47209942 -93106823 - AluSx SINE Alu -13 299 1 6461 201 69 57 chr10 47209942 47210940 -93105825 + L1MDa LINE L1 3537 4522 -2216 2598 64 0 3 chr10 47210940 47211252 -93105513 + AluY SINE Alu 1 311 0 6461 201 69 57 chr10 47211252 47211709 -93105056 + L1MDa LINE L1 4522 6182 -556 1543 165 3 52 chr10 47211710 47212037 -93104728 + AluSq SINE Alu 1 311 -2 1349 137 18 24 chr10 47212041 47212302 -93104463 - MER4B-int LTR ERV1 -4028 843 703 460 97 14 0 chr10 47212302 47212374 -93104391 - Alu SINE Alu 0 312 240 253 272 91 62 chr10 47213242 47213428 -93103337 - MIR SINE MIR -56 206 17 1607 189 13 17 chr10 47213626 47213928 -93102837 - AluJo SINE Alu -11 301 1 260 196 0 0 chr10 47213936 47213982 -93102783 - L2 LINE L2 -90 3182 3137 493 151 28 19 chr10 47213987 47214093 -93102672 - L1MA10 LINE L1 -1 6333 6227 431 206 196 5 chr10 47214094 47214293 -93102472 - L1M4 LINE L1 -816 5330 5094 * 1022 223 116 43 chr10 47214273 47214454 -93102311 - L1M4 LINE L1 -1378 4768 4602 2046 61 4 0 chr10 47214454 47214699 -93102066 - AluSp SINE Alu -21 292 47 1022 223 116 43 chr10 47214699 47214938 -93101827 - L1M4 LINE L1 -1544 4602 4317 2287 110 0 0 chr10 47215282 47215590 -93101175 - AluSc SINE Alu -1 308 1 376 167 0 0 chr10 47215623 47215683 -93101082 - L1MC4 LINE L1 -15 8027 7968 3972 200 111 52 chr10 47215683 47216866 -93099899 - L1MC4 LINE L1 -19 8023 6771 258 81 0 0 chr10 47216881 47216918 -93099847 + (CA)n Simple_repeat Simple_repeat 2 38 0 922 266 16 4 chr10 47216918 47217162 -93099603 - L1MC4a LINE L1 -1217 6591 6345 1231 272 45 31 chr10 47217166 47217589 -93099176 - L1ME2 LINE L1 -10 6154 5726 972 220 40 87 chr10 47217611 47217639 -93099126 + MLT2C1 LTR ERVL 13 41 -356 410 226 0 54 chr10 47217639 47217732 -93099033 + MLT1E3 LTR MaLR 63 150 -474 972 220 40 87 chr10 47217732 47217748 -93099017 + MLT2C1 LTR ERVL 41 56 -341 2107 142 0 0 chr10 47217748 47218044 -93098721 - AluSx SINE Alu -16 296 1 972 220 40 87 chr10 47218044 47218310 -93098455 + MLT2C1 LTR ERVL 56 397 0 1567 205 31 35 chr10 47218313 47218869 -93097896 - L1ME2 LINE L1 -442 5722 5175 676 132 0 0 chr10 47218882 47218988 -93097777 - AluSg/x SINE Alu -3 306 201 2344 97 0 22 chr10 47219000 47219319 -93097446 - AluSx SINE Alu 0 312 1 617 243 59 20 chr10 47219327 47219465 -93097300 - L1ME2 LINE L1 -1708 4438 4307 1803 119 51 31 chr10 47219465 47219784 -93096981 - AluSx SINE Alu 0 312 1 617 243 59 20 chr10 47219784 47219951 -93096814 - L1ME2 LINE L1 -1839 4307 4104 2491 92 0 3 chr10 47221888 47222202 -93094563 - AluSq SINE Alu 0 313 1 24 0 0 0 chr10 47222508 47222532 -93094233 + AT_rich Low_complexity Low_complexity 1 24 0 1774 133 22 48 chr10 47222745 47223061 -93093704 - AluJb SINE Alu 0 312 5 2061 138 3 0 chr10 47223822 47224118 -93092647 - AluSx SINE Alu -15 297 1 438 304 46 54 chr10 47224489 47224714 -93092051 - MIR SINE MIR -12 250 26 2280 104 10 0 chr10 47224714 47225021 -93091744 - AluSq SINE Alu -3 310 1 438 304 46 54 chr10 47225021 47225035 -93091730 - MIR SINE MIR -236 26 13 2406 70 7 10 chr10 47225191 47225492 -93091273 - AluY SINE Alu -11 300 1 6299 204 59 22 chr10 47226070 47227715 -93089050 + L1M4 LINE L1 5 1709 -4833 2291 105 0 0 chr10 47228343 47228637 -93088128 - AluSx SINE Alu -18 294 1 2192 83 20 23 chr10 47229054 47229356 -93087409 - AluSx SINE Alu -11 301 1 304 255 47 38 chr10 47230305 47230411 -93086354 + MER5A DNA MER1_type 9 115 -74 412 290 25 62 chr10 47230431 47230593 -93086172 - L2 LINE L2 -168 3104 2949 350 295 98 21 chr10 47231661 47231854 -93084911 - MIR SINE MIR -15 247 40 23 0 0 0 chr10 47232027 47232050 -93084715 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 47232062 47232095 -93084670 + AT_rich Low_complexity Low_complexity 1 33 0 2685 157 34 125 chr10 47232899 47233005 -93083760 + L1MB7 LINE L1 4900 5014 -1170 1345 229 24 3 chr10 47233005 47233293 -93083472 + AluJb SINE Alu 5 298 -14 2685 157 34 125 chr10 47233293 47233505 -93083260 + L1MB7 LINE L1 5014 5244 -940 460 152 0 0 chr10 47233505 47233571 -93083194 + AluJo SINE Alu 1 66 -246 2316 84 3 10 chr10 47233571 47233879 -93082886 + AluSp SINE Alu 1 306 -7 1463 182 0 12 chr10 47233879 47234159 -93082606 + AluJo SINE Alu 57 312 0 2685 157 34 125 chr10 47234159 47234324 -93082441 + L1MB7 LINE L1 5242 5420 -764 1526 130 0 127 chr10 47234324 47234670 -93082095 + AluSp SINE Alu 2 303 0 2685 157 34 125 chr10 47234670 47234974 -93081791 + L1MB7 LINE L1 5420 5750 -434 2216 112 0 3 chr10 47234974 47235270 -93081495 + AluSx SINE Alu 1 295 -17 2243 92 0 0 chr10 47235272 47235583 -93081182 + AluY SINE Alu 1 311 0 2685 157 34 125 chr10 47235583 47235822 -93080943 + L1MB7 LINE L1 5751 5902 -282 1693 138 29 23 chr10 47235822 47236343 -93080422 + MER4A LTR ERV1 1 664 0 747 209 75 0 chr10 47236402 47236589 -93080176 + L1MB7 LINE L1 5983 6183 -1 225 196 0 0 chr10 47236591 47236642 -93080123 + CT-rich Low_complexity Low_complexity 3 53 0 270 204 10 68 chr10 47236936 47237039 -93079726 - L1ME3A LINE L1 -218 5952 5856 573 70 23 12 chr10 47237048 47237134 -93079631 - MER4E LTR ERV1 -2 764 678 6945 120 24 34 chr10 47237134 47237326 -93079439 - MER4B-int LTR ERV1 -2934 3824 3632 2144 132 0 0 chr10 47237326 47237629 -93079136 + AluSx SINE Alu 1 303 -9 6945 120 24 34 chr10 47237629 47237652 -93079113 - MER4B-int LTR ERV1 -3126 3632 3610 1826 151 146 13 chr10 47237652 47238030 -93078735 + MSTA LTR MaLR 1 428 0 6945 120 24 34 chr10 47238030 47239031 -93077734 - MER4B-int LTR ERV1 -3148 3610 2619 1385 131 189 12 chr10 47239038 47239163 -93077602 - AluSg1 SINE Alu -4 305 204 2265 91 10 7 chr10 47239163 47239470 -93077295 - AluSx SINE Alu -3 309 2 1385 131 189 12 chr10 47239470 47239603 -93077162 - AluSg1 SINE Alu -105 204 1 303 258 0 21 chr10 47239840 47239937 -93076828 - AluSp SINE Alu -187 116 22 222 231 0 19 chr10 47240285 47240337 -93076428 + L2 LINE L2 3251 3301 -12 189 0 0 0 chr10 47240693 47240714 -93076051 + (TG)n Simple_repeat Simple_repeat 2 22 0 759 115 115 0 chr10 47241674 47241804 -93074961 + AluSg/x SINE Alu 161 305 -7 1337 209 119 3 chr10 47241991 47242302 -93074463 - MER7A DNA MER2_type -1 345 1 714 163 5 7 chr10 47243288 47243491 -93073274 - AluJb SINE Alu -46 266 15 255 292 200 8 chr10 47244587 47244707 -93072058 - L3 LINE CR1 -5 1572 1430 385 260 87 16 chr10 47245652 47245779 -93070986 - L2 LINE L2 0 3272 3137 781 254 120 72 chr10 47246074 47246534 -93070231 - MER21B LTR ERV1 -124 739 258 288 206 55 14 chr10 47246585 47246658 -93070107 - MER21B LTR ERV1 -748 115 40 23 68 0 0 chr10 47246843 47246887 -93069878 + AT_rich Low_complexity Low_complexity 1 44 0 385 255 141 35 chr10 47247096 47247351 -93069414 - L1ME3A LINE L1 -297 5824 5543 380 244 111 36 chr10 47247395 47247585 -93069180 - L1ME3A LINE L1 -757 5389 5221 261 264 23 0 chr10 47248187 47248274 -93068491 + L1ME LINE L1 5769 5857 -264 304 111 0 6 chr10 47248459 47248518 -93068247 - AluSq/x SINE Alu -171 132 84 638 213 74 0 chr10 47248714 47248836 -93067929 + FLAM_A SINE Alu 1 131 -2 2208 104 3 3 chr10 47248857 47249155 -93067610 - AluSg SINE Alu -12 298 1 1034 151 0 13 chr10 47249223 47249382 -93067383 - FRAM SINE Alu -19 157 1 1474 238 70 22 chr10 47249525 47249984 -93066781 - L1MCc LINE L1 -5881 542 62 273 29 0 0 chr10 47249988 47250022 -93066743 + (T)n Simple_repeat Simple_repeat 1 34 0 349 284 74 25 chr10 47250149 47250311 -93066454 - L1M4 LINE L1 -3302 2844 2675 1102 117 101 0 chr10 47250485 47250519 -93066246 - MER107 DNA MER1_type 0 197 168 195 42 0 0 chr10 47250519 47250543 -93066222 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1102 117 101 0 chr10 47250543 47250687 -93066078 - MER107 DNA MER1_type -29 168 1 372 319 78 42 chr10 47251014 47251400 -93065365 - MLT1K LTR MaLR 0 588 189 194 349 0 15 chr10 47251896 47251962 -93064803 + L2 LINE L2 3225 3289 -24 1186 121 76 18 chr10 47251991 47252214 -93064551 + MER46A DNA MER2_type 1 236 0 268 294 110 18 chr10 47252355 47252464 -93064301 - MIR SINE MIR -110 152 34 546 245 117 21 chr10 47252514 47252702 -93064063 - MIR SINE MIR -10 252 47 190 322 116 34 chr10 47252747 47252980 -93063785 - L2 LINE L2 -1054 2260 2009 676 317 74 1 chr10 47253197 47253433 -93063332 + MIR SINE MIR 2 245 -17 464 266 84 21 chr10 47253997 47254140 -93062625 - MIR3 SINE MIR -27 181 30 257 300 32 59 chr10 47254362 47254615 -93062150 + L1ME1 LINE L1 5512 5757 -364 475 231 19 38 chr10 47255226 47255386 -93061379 + MER106A DNA MER1_type 1 157 -79 29 28 0 0 chr10 47255407 47255443 -93061322 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 47255506 47255534 -93061231 + AT_rich Low_complexity Low_complexity 1 28 0 373 194 37 15 chr10 47255718 47255852 -93060913 + Charlie7 DNA MER1_type 2440 2576 -36 196 50 0 75 chr10 47256053 47256093 -93060672 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 2415 94 3 0 chr10 47256192 47256500 -93060265 + AluY SINE Alu 1 309 -2 1822 152 17 13 chr10 47256530 47256832 -93059933 + AluJb SINE Alu 10 312 0 814 265 83 28 chr10 47256947 47257271 -93059494 + L1ME1 LINE L1 5816 6157 -9 2193 116 0 3 chr10 47257923 47258225 -93058540 - AluSq SINE Alu -12 301 1 915 181 0 30 chr10 47258522 47258688 -93058077 + AluJo SINE Alu 3 163 -149 607 107 0 0 chr10 47258746 47258830 -93057935 + AluSc SINE Alu 162 245 -64 1702 136 7 48 chr10 47259138 47259448 -93057317 + AluJb SINE Alu 1 297 -15 1005 158 0 0 chr10 47259448 47259625 -93057140 + (TA)n Simple_repeat Simple_repeat 2 178 0 21 0 0 0 chr10 47260724 47260745 -93056020 + AT_rich Low_complexity Low_complexity 1 21 0 26 34 0 51 chr10 47260815 47260874 -93055891 + AT_rich Low_complexity Low_complexity 1 56 0 268 304 74 52 chr10 47261043 47261178 -93055587 + MIR3 SINE MIR 6 143 -65 204 321 0 0 chr10 47262414 47262467 -93054298 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 1998 149 19 11 chr10 47262502 47263166 -93053599 + MER50 LTR ERV1 1 710 -24 841 98 0 0 chr10 47263199 47263322 -93053443 - L1MB7 LINE L1 -239 5945 5823 256 272 49 12 chr10 47263418 47263499 -93053266 - L2 LINE L2 -211 3061 2978 3763 155 125 22 chr10 47263499 47263858 -93052907 + MER4D LTR ERV1 2 323 -580 1762 139 81 37 chr10 47263858 47264181 -93052584 + MER1B DNA MER1_type 1 337 0 3763 155 125 22 chr10 47264181 47264639 -93052126 + MER4D LTR ERV1 323 903 0 421 148 37 0 chr10 47264705 47264786 -93051979 + LTR39 LTR ERV1 1 84 -699 3831 52 14 0 chr10 47264786 47265287 -93051478 - LTR10D LTR ERV1 0 513 6 3691 176 22 10 chr10 47265293 47265987 -93050778 + LTR39 LTR ERV1 82 783 0 2170 101 0 0 chr10 47266012 47266289 -93050476 + AluSc SINE Alu 1 277 -32 915 59 0 0 chr10 47266289 47266407 -93050358 + (GAAA)n Simple_repeat Simple_repeat 3 120 0 448 322 76 23 chr10 47266408 47266672 -93050093 - L2 LINE L2 -1071 2243 1966 1600 156 53 43 chr10 47266673 47266975 -93049790 + AluJo SINE Alu 1 305 -7 2008 135 3 3 chr10 47266975 47267271 -93049494 + AluSx SINE Alu 1 296 -16 1357 183 144 8 chr10 47267534 47267791 -93048974 - AluJo SINE Alu -20 292 1 206 391 0 0 chr10 47268568 47268637 -93048128 + G-rich Low_complexity Low_complexity 4 72 0 24 0 0 0 chr10 47268659 47268683 -93048082 + AT_rich Low_complexity Low_complexity 1 24 0 1125 198 119 4 chr10 47269331 47269609 -93047156 - L1MC1 LINE L1 -5 6328 6019 2371 75 3 0 chr10 47269618 47269911 -93046854 - AluSx SINE Alu -18 294 1 1767 241 90 2 chr10 47270113 47270636 -93046129 + L1ME3 LINE L1 5570 6138 -24 280 51 0 0 chr10 47270636 47270675 -93046090 - MADE1 DNA Mariner -41 39 1 622 230 97 41 chr10 47270777 47270973 -93045792 + MIR SINE MIR 52 258 -4 598 268 80 18 chr10 47270975 47271251 -93045514 - L1ME4a LINE L1 -247 5874 5582 702 209 16 0 chr10 47272230 47272359 -93044406 - FLAM_A SINE Alu -1 132 2 4896 119 30 34 chr10 47272390 47273282 -93043483 - L1PA16 LINE L1 -1 6165 5277 587 219 192 0 chr10 47273434 47273585 -93043180 - MER5A DNA MER1_type 0 189 10 24 85 0 0 chr10 47274711 47274770 -93041995 + AT_rich Low_complexity Low_complexity 1 59 0 2002 90 23 8 chr10 47275585 47275978 -93040787 + LTR7 LTR ERV1 1 443 -7 247 287 93 23 chr10 47277661 47277919 -93038846 + L1ME4a LINE L1 5846 6121 0 1949 137 33 3 chr10 47277948 47278247 -93038518 + AluJb SINE Alu 1 308 -4 319 270 8 8 chr10 47278775 47278901 -93037864 + CT-rich Low_complexity Low_complexity 3 128 0 876 123 15 0 chr10 47278914 47279044 -93037721 - AluSq SINE Alu -47 266 135 2200 110 7 0 chr10 47279044 47279343 -93037422 - AluSx SINE Alu -11 301 1 591 179 43 14 chr10 47280986 47281126 -93035639 + L1MB7 LINE L1 6029 6172 -12 4161 179 30 12 chr10 47281126 47282356 -93034409 + L1MD1 LINE L1 4819 6074 -168 1121 140 4 70 chr10 47282356 47282478 -93034287 - Tigger7 DNA MER2_type -1 2586 2486 2251 131 0 3 chr10 47282478 47282791 -93033974 - AluSx SINE Alu 0 312 1 1121 140 4 70 chr10 47282791 47282911 -93033854 - Tigger7 DNA MER2_type -101 2486 2360 267 303 49 5 chr10 47282932 47283117 -93033648 + L1MC4a LINE L1 5199 5391 -755 2173 135 0 0 chr10 47283147 47283436 -93033329 + AluSx SINE Alu 1 289 -23 276 280 114 26 chr10 47283466 47283659 -93033106 + L1MC4a LINE L1 5416 5625 -496 2157 130 7 0 chr10 47283683 47283991 -93032774 + AluSg SINE Alu 1 310 0 339 337 68 40 chr10 47284036 47284288 -93032477 + L1MC4a LINE L1 5666 5924 -1884 360 0 0 0 chr10 47284499 47284539 -93032226 + (CA)n Simple_repeat Simple_repeat 2 41 0 2477 169 79 89 chr10 47285259 47286057 -93030708 - L1P LINE L1 -747 5404 4615 2074 131 0 0 chr10 47286703 47287008 -93029757 - AluSx SINE Alu 0 305 1 1514 160 4 19 chr10 47287683 47287946 -93028819 - AluJb SINE Alu -53 259 1 2222 107 0 0 chr10 47287955 47288246 -93028519 - AluSc SINE Alu -18 291 1 2132 142 0 7 chr10 47288301 47288611 -93028154 - AluSx SINE Alu -4 308 1 22 35 0 0 chr10 47289011 47289040 -93027725 + AT_rich Low_complexity Low_complexity 1 29 0 2323 109 0 0 chr10 47289325 47289628 -93027137 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 47290611 47290640 -93026125 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr10 47291339 47291369 -93025396 + AT_rich Low_complexity Low_complexity 1 30 0 479 238 46 53 chr10 47293904 47294055 -93022710 - MIR SINE MIR -15 247 98 897 133 7 22 chr10 47294347 47294482 -93022283 + AluSq/x SINE Alu 1 133 -179 311 192 0 55 chr10 47295014 47295087 -93021678 - MER103 DNA DNA -85 81 13 209 222 16 0 chr10 47295172 47295235 -93021530 + GA-rich Low_complexity Low_complexity 1 64 0 2089 119 0 3 chr10 47295680 47295996 -93020769 - AluSx SINE Alu 0 315 1 1011 126 69 6 chr10 47295996 47296170 -93020595 - L1MC1 LINE L1 -8 6325 6141 213 325 113 71 chr10 47296376 47296843 -93019922 + L2 LINE L2 2372 2858 -456 208 342 26 26 chr10 47296903 47297017 -93019748 + L2 LINE L2 2989 3102 -170 1506 184 47 37 chr10 47297330 47297503 -93019262 - AluJo SINE Alu -8 304 125 2205 89 21 7 chr10 47297503 47297794 -93018971 + AluSc SINE Alu 1 295 -14 1506 184 47 37 chr10 47297794 47297919 -93018846 - AluJo SINE Alu -187 125 3 208 305 19 48 chr10 47297959 47298064 -93018701 + L2 LINE L2 3198 3299 -14 941 180 52 0 chr10 47298542 47298736 -93018029 - MER3 DNA MER1_type 0 209 6 1846 155 0 21 chr10 47299218 47299509 -93017256 + AluJo SINE Alu 3 287 -25 187 313 142 33 chr10 47302121 47302332 -93014433 - L2 LINE L2 -637 2677 2444 210 289 62 72 chr10 47302579 47302621 -93014144 + MIR SINE MIR 33 74 -134 1896 141 57 3 chr10 47302621 47302904 -93013861 - AluSx SINE Alu -14 298 1 210 289 62 72 chr10 47302904 47302958 -93013807 + MIR SINE MIR 74 128 -80 186 191 128 0 chr10 47303221 47303268 -93013497 - L2 LINE L2 -214 3058 3006 3397 245 118 22 chr10 47303704 47304045 -93012720 + L1M4 LINE L1 3523 3830 -2316 2171 133 7 0 chr10 47304045 47304346 -93012419 + AluSx SINE Alu 1 303 -9 3397 245 118 22 chr10 47304346 47304924 -93011841 + L1M4 LINE L1 3830 4351 -1795 2289 88 3 7 chr10 47304924 47305220 -93011545 + AluSq SINE Alu 1 295 -18 3397 245 118 22 chr10 47305220 47305425 -93011340 + L1M4 LINE L1 4351 4535 -1611 1743 199 65 22 chr10 47305425 47305873 -93010892 + MLT1C LTR MaLR 1 467 0 3397 245 118 22 chr10 47305873 47306181 -93010584 + L1M4 LINE L1 4535 5095 -1051 1207 161 0 41 chr10 47306290 47306508 -93010257 + AluJo SINE Alu 2 210 -102 984 155 21 64 chr10 47306509 47306633 -93010132 + AluJo SINE Alu 9 124 -188 2371 81 0 16 chr10 47306633 47306941 -93009824 + AluY SINE Alu 1 303 -8 984 155 21 64 chr10 47306941 47307003 -93009762 + AluJo SINE Alu 124 187 -125 2156 109 0 0 chr10 47307353 47307670 -93009095 - AluY SINE Alu 0 317 1 299 280 24 88 chr10 47308157 47308282 -93008483 + L2 LINE L2 3155 3271 -1 458 213 79 0 chr10 47309049 47309176 -93007589 + L1MDa LINE L1 40 176 -6364 5595 195 96 29 chr10 47309188 47310903 -93005862 + L1MDa LINE L1 805 2634 -3906 1374 208 96 123 chr10 47310944 47311496 -93005269 + L1MD2 LINE L1 5706 6242 0 953 122 0 51 chr10 47311504 47311660 -93005105 + FRAM SINE Alu 20 167 -9 26 50 0 0 chr10 47311790 47311830 -93004935 + AT_rich Low_complexity Low_complexity 1 40 0 551 239 116 38 chr10 47311896 47312189 -93004576 - HAL1 LINE L1 -234 2273 1958 324 321 80 43 chr10 47312460 47312622 -93004143 + MIR3 SINE MIR 16 183 -25 428 62 16 0 chr10 47313581 47313645 -93003120 + (GA)n Simple_repeat Simple_repeat 2 66 0 1178 138 0 0 chr10 47313965 47314125 -93002640 - AluSg/x SINE Alu -23 289 130 1644 132 25 4 chr10 47314132 47314375 -93002390 - AluSx SINE Alu -59 253 6 2129 183 128 35 chr10 47314428 47314878 -93001887 - MLT1F1 LTR MaLR -4 563 58 2113 125 0 10 chr10 47314878 47315183 -93001582 - AluSq SINE Alu -7 306 5 2129 183 128 35 chr10 47315183 47315247 -93001518 - MLT1F1 LTR MaLR -509 58 1 3172 142 116 24 chr10 47317328 47318118 -92998647 - MER4D LTR ERV1 0 832 1 21 0 0 0 chr10 47318481 47318502 -92998263 + AT_rich Low_complexity Low_complexity 1 21 0 497 306 70 21 chr10 47319116 47319302 -92997463 - MIR SINE MIR -48 214 20 2272 109 0 7 chr10 47320064 47320368 -92996397 - AluSx SINE Alu -10 302 1 3765 210 85 8 chr10 47320370 47321283 -92995482 - L1MC4a LINE L1 -179 7629 6646 23 0 0 0 chr10 47321750 47321773 -92994992 + AT_rich Low_complexity Low_complexity 1 23 0 822 192 0 0 chr10 47322243 47322368 -92994397 - FLAM_A SINE Alu -8 125 1 686 292 88 37 chr10 47322368 47322917 -92993848 - L2 LINE L2 -242 3030 2447 242 264 0 0 chr10 47323038 47323091 -92993674 + L2 LINE L2 3219 3271 -1 289 317 96 19 chr10 47323096 47323200 -92993565 - MIR SINE MIR -66 142 31 2369 91 0 0 chr10 47323823 47324131 -92992634 - AluY SINE Alu -3 308 1 28 0 0 0 chr10 47324131 47324159 -92992606 + AT_rich Low_complexity Low_complexity 1 28 0 463 271 35 79 chr10 47324454 47324657 -92992108 - MIR SINE MIR -68 194 1 244 305 19 0 chr10 47326425 47326530 -92990235 + CT-rich Low_complexity Low_complexity 2 108 0 1542 181 76 32 chr10 47328256 47328626 -92988139 - MLT1B LTR MaLR -2 388 3 413 309 8 0 chr10 47329824 47329947 -92986818 + MIR SINE MIR 79 202 -60 2172 102 0 7 chr10 47330419 47330714 -92986051 + AluSg1 SINE Alu 1 293 -16 358 179 12 60 chr10 47331219 47331303 -92985462 - HsTC2 DNA Tc2 0 1898 1819 436 287 72 49 chr10 47331352 47331617 -92985148 + L1MEd LINE L1 367 637 -5482 350 253 40 20 chr10 47331618 47331717 -92985048 - HsTC2 DNA Tc2 -1794 104 4 22 0 0 0 chr10 47332559 47332581 -92984184 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr10 47333222 47333266 -92983499 + (TG)n Simple_repeat Simple_repeat 2 45 0 220 337 79 0 chr10 47333449 47333538 -92983227 - L3 LINE CR1 -70 1507 1412 200 300 119 38 chr10 47333672 47333832 -92982933 - L3 LINE CR1 -100 1477 1305 439 309 89 62 chr10 47334766 47335171 -92981594 - L3 LINE CR1 -119 1458 1043 586 236 169 10 chr10 47336132 47336327 -92980438 + MIR SINE MIR 3 228 -34 234 0 0 0 chr10 47336793 47336819 -92979946 + (CA)n Simple_repeat Simple_repeat 2 27 0 185 382 42 37 chr10 47339431 47339622 -92977143 + L2 LINE L2 2553 2744 -570 287 327 164 0 chr10 47339943 47340053 -92976712 + L2 LINE L2 3137 3264 -8 360 0 0 0 chr10 47340545 47340585 -92976180 + (TG)n Simple_repeat Simple_repeat 1 40 0 2550 65 3 0 chr10 47341883 47342189 -92974576 - AluSp SINE Alu -5 308 2 1518 211 60 7 chr10 47342718 47343002 -92973763 - AluJb SINE Alu -3 299 1 246 348 29 43 chr10 47343002 47343140 -92973625 - MIR SINE MIR -111 151 16 2035 138 0 0 chr10 47344062 47344424 -92972341 + AluSx SINE Alu 1 362 0 2376 70 0 10 chr10 47344911 47345210 -92971555 + AluY SINE Alu 1 296 -15 791 228 60 35 chr10 47345210 47345495 -92971270 + L1MC4a LINE L1 5642 5933 -1875 317 156 0 16 chr10 47345661 47345725 -92971040 + C-rich Low_complexity Low_complexity 3 65 0 541 312 178 45 chr10 47345748 47346472 -92970293 + L2 LINE L2 2461 3270 -2 947 282 82 9 chr10 47347179 47347495 -92969270 - LTR16A LTR ERVL -111 339 1 206 286 71 0 chr10 47347556 47347626 -92969139 + MIR SINE MIR 49 123 -139 884 170 66 28 chr10 47349011 47349193 -92967572 - MER5A DNA MER1_type 0 189 1 1477 216 48 41 chr10 47350411 47350823 -92965942 - MLT1C LTR MaLR -52 415 1 241 312 48 40 chr10 47350962 47351087 -92965678 - L2 LINE L2 -1 3312 3187 463 345 26 26 chr10 47351803 47352032 -92964733 + MIR SINE MIR 20 248 -14 234 302 148 47 chr10 47356263 47356432 -92960333 + L2 LINE L2 3081 3266 -6 2512 280 109 33 chr10 47359966 47360244 -92956521 - L2 LINE L2 -4 3309 3054 2231 97 3 3 chr10 47360244 47360534 -92956231 + AluSx SINE Alu 1 290 -22 2512 280 109 33 chr10 47360534 47361553 -92955212 - L2 LINE L2 -259 3054 1870 1050 290 89 33 chr10 47361815 47362364 -92954401 - MLT1K LTR MaLR -8 580 1 2222 211 129 19 chr10 47366046 47366634 -92950131 - L1MD2 LINE L1 0 6359 5707 1019 231 35 65 chr10 47366634 47366850 -92949915 - L1MDa LINE L1 -3984 2556 2356 2429 145 81 20 chr10 47366850 47367257 -92949508 - MSTB1 LTR MaLR 0 432 1 1019 231 35 65 chr10 47367257 47367442 -92949323 - L1MDa LINE L1 -4184 2356 2167 482 326 52 19 chr10 47368682 47368952 -92947813 + L1ME LINE L1 5479 5757 -364 257 311 118 17 chr10 47369765 47369884 -92946881 - MIR SINE MIR -112 150 20 538 282 158 5 chr10 47372452 47372654 -92944111 + MIR SINE MIR 28 260 -2 221 83 28 0 chr10 47373785 47373821 -92942944 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 409 130 39 26 chr10 47374178 47374255 -92942510 - Tigger3(Golem) DNA MER2_type -41 2988 2911 351 0 0 0 chr10 47374291 47374330 -92942435 + (TG)n Simple_repeat Simple_repeat 2 40 0 2001 170 29 12 chr10 47374331 47374672 -92942093 + MER7A DNA MER2_type 1 345 -1 2230 256 63 18 chr10 47374743 47376108 -92940657 + L1ME1 LINE L1 1557 3006 -3534 852 168 20 152 chr10 47376108 47376358 -92940407 - MER20 DNA MER1_type -1 218 2 2230 256 63 18 chr10 47376358 47376538 -92940227 + L1ME1 LINE L1 3006 3176 -3364 1029 256 85 25 chr10 47376537 47376886 -92939879 + L1ME1 LINE L1 3584 3911 -2629 * 1634 228 16 25 chr10 47376886 47377254 -92939511 - MLT1A1 LTR MaLR 0 365 1 1029 256 85 25 chr10 47377254 47377683 -92939082 + L1ME1 LINE L1 3911 4313 -2227 2207 29 0 26 chr10 47377683 47377956 -92938809 + L1PA4 LINE L1 5890 6155 0 1029 256 85 25 chr10 47377956 47379507 -92937258 + L1ME1 LINE L1 4313 5762 -778 1096 169 39 14 chr10 47379520 47379931 -92936834 + Tigger7 DNA MER2_type 1 500 -233 847 142 104 11 chr10 47379930 47380113 -92936652 + Tigger7 DNA MER2_type 2384 2583 -4 * 981 251 71 15 chr10 47380118 47380495 -92936270 + L1ME1 LINE L1 6184 6534 -26 464 180 0 63 chr10 47380841 47380952 -92935813 + MER53 DNA DNA 4 107 -82 238 308 0 0 chr10 47381874 47381958 -92934807 + (TGGA)n Simple_repeat Simple_repeat 1 84 0 344 273 23 0 chr10 47383351 47383439 -92933326 - MIR SINE MIR -122 140 51 182 286 0 0 chr10 47385537 47385579 -92931186 - MIR SINE MIR -60 148 107 396 0 0 0 chr10 47385774 47385818 -92930947 + (TG)n Simple_repeat Simple_repeat 2 45 0 392 285 163 43 chr10 47386287 47386729 -92930036 - L2 LINE L2 0 3313 2819 755 307 47 47 chr10 47386938 47387300 -92929465 + L2 LINE L2 2129 2490 -824 198 300 89 62 chr10 47387286 47387543 -92929222 + L2 LINE L2 3046 3309 -4 * 432 257 67 55 chr10 47388027 47388280 -92928485 + L1ME4a LINE L1 5632 5887 -234 378 121 0 0 chr10 47388485 47388551 -92928214 + (CA)n Simple_repeat Simple_repeat 2 67 0 277 258 40 126 chr10 47389998 47390324 -92926441 - L2 LINE L2 -65 3248 2951 182 345 0 35 chr10 47390724 47390782 -92925983 - MIR3 SINE MIR -46 162 107 252 50 0 0 chr10 47391305 47391345 -92925420 + Alu SINE Alu 262 301 0 1944 98 98 0 chr10 47391412 47391676 -92925089 - AluSq SINE Alu -18 295 6 225 314 37 23 chr10 47393891 47393988 -92922777 - MIR SINE MIR -105 103 19 22 56 0 0 chr10 47394189 47394225 -92922540 + AT_rich Low_complexity Low_complexity 1 36 0 229 337 22 22 chr10 47395430 47395519 -92921246 + L1MC/D LINE L1 5544 5632 -2176 2248 135 0 0 chr10 47396440 47396752 -92920013 - AluSq SINE Alu -1 312 1 210 71 0 0 chr10 47396854 47396882 -92919883 + (TG)n Simple_repeat Simple_repeat 1 28 0 2285 95 3 10 chr10 47398086 47398382 -92918383 - AluSx SINE Alu -18 294 1 368 285 80 26 chr10 47399226 47399377 -92917388 + Charlie8 DNA MER1_type 6 164 -2253 2122 141 0 0 chr10 47399581 47399879 -92916886 + AluJo SINE Alu 1 298 -14 460 218 177 16 chr10 47400779 47400903 -92915862 - MER5B DNA MER1_type -28 150 7 190 154 51 0 chr10 47400953 47400992 -92915773 - MIR SINE MIR 0 262 222 415 218 23 0 chr10 47401026 47401113 -92915652 - MIR SINE MIR -119 143 55 308 328 0 8 chr10 47401125 47401253 -92915512 + MER113 DNA MER1_type? 8 134 -387 267 31 0 0 chr10 47401479 47401511 -92915254 + (CA)n Simple_repeat Simple_repeat 2 33 0 349 184 15 4 chr10 47401952 47402080 -92914685 + MER53 DNA DNA 2 189 0 310 289 137 53 chr10 47403080 47403270 -92913495 + MIR SINE MIR 51 256 -6 239 320 51 51 chr10 47404286 47404442 -92912323 + MIR3 SINE MIR 44 199 -9 191 219 27 68 chr10 47404444 47404517 -92912248 - MIR SINE MIR -15 247 178 2420 160 55 2 chr10 47404521 47404976 -92911789 - L1MB3 LINE L1 -9 6174 5696 1063 191 0 0 chr10 47405900 47406073 -92910692 - AluJo SINE Alu -8 304 132 262 59 78 0 chr10 47406073 47406124 -92910641 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 274 128 0 0 chr10 47406132 47406171 -92910594 - AluJo SINE Alu -179 123 85 281 277 187 7 chr10 47406963 47407118 -92909647 + MIR SINE MIR 20 202 -60 324 0 0 0 chr10 47407792 47407828 -92908937 + (TC)n Simple_repeat Simple_repeat 1 36 0 252 0 0 0 chr10 47407827 47407855 -92908910 + (CA)n Simple_repeat Simple_repeat 1 28 0 * 286 376 20 13 chr10 47407874 47408023 -92908742 - MIR SINE MIR -111 151 2 241 297 48 48 chr10 47408620 47408785 -92907980 - HAL1 LINE L1 -819 1688 1524 221 271 34 0 chr10 47409046 47409105 -92907660 + CT-rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr10 47409460 47409482 -92907283 + AT_rich Low_complexity Low_complexity 1 22 0 329 325 92 6 chr10 47410035 47410198 -92906567 + MIR SINE MIR 21 197 -65 246 260 16 55 chr10 47410668 47410795 -92905970 + (CGGGG)n Simple_repeat Simple_repeat 3 124 0 233 130 14 43 chr10 47410796 47410865 -92905900 + GA-rich Low_complexity Low_complexity 1 67 0 1785 106 0 23 chr10 47411035 47411300 -92905465 - AluY SINE Alu -52 259 1 27 29 0 0 chr10 47411407 47411441 -92905324 + AT_rich Low_complexity Low_complexity 1 34 0 279 342 75 12 chr10 47413377 47413538 -92903227 + MIR SINE MIR 63 233 -29 236 284 30 0 chr10 47413692 47413759 -92903006 - MIR SINE MIR -135 127 59 182 345 0 35 chr10 47414494 47414552 -92902213 + MIR3 SINE MIR 107 162 -46 348 267 59 0 chr10 47415502 47415603 -92901162 - MIR SINE MIR -73 189 83 404 250 60 0 chr10 47416550 47416650 -92900115 + MIR SINE MIR 155 260 -2 291 275 0 50 chr10 47416702 47416782 -92899983 - MIR SINE MIR -122 140 65 23 0 0 0 chr10 47417323 47417346 -92899419 + AT_rich Low_complexity Low_complexity 1 23 0 307 298 48 10 chr10 47418524 47418628 -92898137 + MIR3 SINE MIR 82 189 -19 228 297 10 10 chr10 47419136 47419237 -92897528 + (CA)n Simple_repeat Simple_repeat 1 101 0 439 302 9 0 chr10 47419364 47419470 -92897295 + MIR SINE MIR 13 119 -143 208 308 132 0 chr10 47420319 47420410 -92896355 + MIR SINE MIR 73 175 -87 424 355 0 29 chr10 47422860 47423032 -92893733 - MIR SINE MIR -10 252 86 262 148 74 0 chr10 47423203 47423257 -92893508 - MIR SINE MIR -93 169 112 2390 71 0 0 chr10 47423448 47423728 -92893037 + AluY SINE Alu 16 295 -16 418 324 29 6 chr10 47424773 47424943 -92891822 - L1ME LINE L1 -320 5801 5628 760 246 11 0 chr10 47426229 47426408 -92890357 - MER5A DNA MER1_type -3 186 6 789 366 19 81 chr10 47426439 47426761 -92890004 + AluSx SINE Alu 1 302 0 794 197 0 6 chr10 47427944 47428122 -92888643 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 24 0 0 0 chr10 47429424 47429448 -92887317 + AT_rich Low_complexity Low_complexity 1 24 0 270 95 0 0 chr10 47429453 47429495 -92887270 + (CA)n Simple_repeat Simple_repeat 2 43 0 846 184 0 0 chr10 47429602 47429781 -92886984 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 272 130 0 0 chr10 47430796 47430842 -92885923 - MIR SINE MIR -142 120 75 1041 65 0 0 chr10 47431814 47431952 -92884813 + (TGGA)n Simple_repeat Simple_repeat 1 138 0 180 111 0 0 chr10 47434383 47434410 -92882355 + (GGGTG)n Simple_repeat Simple_repeat 4 30 0 1615 176 143 0 chr10 47436746 47437081 -92879684 - MLT1B LTR MaLR 0 390 8 26 0 0 0 chr10 47438452 47438478 -92878287 + AT_rich Low_complexity Low_complexity 1 26 0 417 233 0 0 chr10 47439318 47439408 -92877357 - MER53 DNA DNA -94 95 6 423 308 15 0 chr10 47440137 47440270 -92876495 - MER91B DNA MER1_type -41 149 15 213 233 0 0 chr10 47440338 47440381 -92876384 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 442 300 0 23 chr10 47440513 47440643 -92876122 - MIR3 SINE MIR -54 154 28 226 224 0 0 chr10 47440849 47440898 -92875867 - L3 LINE CR1 -116 1461 1413 186 43 0 0 chr10 47440993 47441016 -92875749 + (TCC)n Simple_repeat Simple_repeat 2 24 0 197 336 18 9 chr10 47441105 47441218 -92875547 + MIR SINE MIR 109 222 -40 328 332 63 16 chr10 47441823 47442013 -92874752 + MIR SINE MIR 47 245 -17 296 287 11 0 chr10 47442106 47442193 -92874572 + L2 LINE L2 2425 2512 -802 2576 223 75 19 chr10 47442200 47442995 -92873770 + L1ME LINE L1 4344 5183 -963 352 124 0 0 chr10 47442995 47443057 -92873708 - MLT2A2 LTR ERVL 0 453 399 317 356 0 0 chr10 47443067 47443157 -92873608 - L1MC4 LINE L1 -1339 6703 6614 * 352 240 0 62 chr10 47443129 47443225 -92873540 - L1MC4 LINE L1 -1339 6703 6614 2779 78 36 3 chr10 47443243 47443630 -92873135 - MLT2A1 LTR ERVL -44 400 1 42301 70 13 11 chr10 47443630 47448200 -92868565 - HERVL-A1 LTR ERVL 0 5654 1073 2522 71 3 3 chr10 47448200 47448511 -92868254 + AluY SINE Alu 1 311 0 42301 70 13 11 chr10 47448511 47449586 -92867179 - HERVL-A1 LTR ERVL -4581 1073 1 2730 73 36 88 chr10 47449586 47450054 -92866711 - MLT2A1 LTR ERVL 0 444 1 1184 236 55 3 chr10 47450054 47450451 -92866314 + L1ME LINE L1 5179 5595 -571 781 227 32 51 chr10 47450452 47450668 -92866097 - MER58 DNA MER1_type -2163 257 46 241 294 0 15 chr10 47451326 47451394 -92865371 + Charlie8 DNA MER1_type 5 71 -2346 284 265 121 30 chr10 47451738 47451870 -92864895 - L2 LINE L2 -3 3310 3167 221 0 35 0 chr10 47452771 47452800 -92863965 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 314 302 39 39 chr10 47453171 47453300 -92863465 + MIR SINE MIR 14 142 -120 2544 224 32 51 chr10 47454004 47454775 -92861990 - L1ME1 LINE L1 0 6166 5410 251 191 27 0 chr10 47455087 47455161 -92861604 + L1P1 LINE L1 5376 5452 -669 391 385 50 29 chr10 47455174 47455517 -92861248 + L1MC/D LINE L1 5471 5820 -1988 934 173 37 19 chr10 47455542 47455770 -92860995 + L1MC2 LINE L1 5592 5832 -501 2231 79 0 0 chr10 47455770 47456036 -92860729 + AluSq SINE Alu 1 266 -47 405 188 0 0 chr10 47456146 47456231 -92860534 + (CAT)n Simple_repeat Simple_repeat 2 86 0 22 56 0 0 chr10 47456473 47456509 -92860256 + AT_rich Low_complexity Low_complexity 1 36 0 1858 163 10 16 chr10 47457494 47457801 -92858964 + AluJo SINE Alu 1 305 -7 2375 116 0 0 chr10 47458410 47458721 -92858044 - AluSx SINE Alu -1 311 1 275 49 24 0 chr10 47459177 47459218 -92857547 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 282 300 33 17 chr10 47459806 47459926 -92856839 - MIR SINE MIR -119 143 22 205 260 0 0 chr10 47460131 47460181 -92856584 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 216 0 0 0 chr10 47460233 47460257 -92856508 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 303 281 26 26 chr10 47461290 47461404 -92855361 + L2 LINE L2 2944 3057 -215 331 286 83 42 chr10 47461497 47461665 -92855100 + MIR SINE MIR 5 179 -83 188 195 49 0 chr10 47461778 47461819 -92854946 + L2 LINE L2 3262 3304 -9 213 300 236 0 chr10 47463095 47463235 -92853530 + MIR SINE MIR 77 249 -13 229 302 94 0 chr10 47463851 47463947 -92852818 + LTR8 LTR ERV1 21 125 -566 * 609 262 81 18 chr10 47463918 47464312 -92852453 + MER87 LTR ERV1 92 541 0 600 202 67 10 chr10 47465782 47465890 -92850875 + MER5A DNA MER1_type 4 128 -61 2651 54 0 0 chr10 47465890 47466187 -92850578 - AluY SINE Alu -10 301 5 600 202 67 10 chr10 47466187 47466247 -92850518 + MER5A DNA MER1_type 128 183 -6 243 0 0 0 chr10 47466889 47466916 -92849849 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 438 269 45 15 chr10 47468506 47468640 -92848125 - MER91B DNA MER1_type 0 190 53 228 302 85 16 chr10 47469074 47469203 -92847562 - MIR SINE MIR -61 201 64 858 345 78 36 chr10 47471001 47471604 -92845161 + L1M4 LINE L1 2573 3200 -2946 2216 14 11 21 chr10 47471955 47472237 -92844528 + L1P1 LINE L1 5546 5824 -331 301 205 133 0 chr10 47472237 47472320 -92844445 - MER69 DNA AcHobo -258 2268 2175 7118 130 35 2 chr10 47472332 47473398 -92843367 + HSMAR2 DNA Mariner 160 1266 -36 396 0 0 0 chr10 47473398 47473442 -92843323 + (TA)n Simple_repeat Simple_repeat 1 44 0 7118 130 35 2 chr10 47473442 47473481 -92843284 + HSMAR2 DNA Mariner 1266 1302 0 1659 170 7 13 chr10 47473556 47473862 -92842903 + L1MB3 LINE L1 5659 5962 -221 3751 72 20 12 chr10 47473862 47474363 -92842402 + L1PA10 LINE L1 5654 6168 0 1141 146 59 5 chr10 47474363 47474581 -92842184 + L1MB3 LINE L1 5953 6183 0 2972 151 16 4 chr10 47475129 47475633 -92841132 + L1MC1 LINE L1 5823 6332 -1 337 303 13 13 chr10 47476195 47476350 -92840415 - L1MC4a LINE L1 -1775 6033 5879 1090 324 63 16 chr10 47476364 47476935 -92839830 - L1MC4a LINE L1 -1954 5854 5257 218 367 18 0 chr10 47477139 47477228 -92839537 + MIR SINE MIR 60 151 -57 6668 34 0 0 chr10 47478681 47479471 -92837294 - L1P LINE L1 -889 5257 4468 957 126 19 0 chr10 47479471 47479630 -92837135 - HSMAR2 DNA Mariner -1139 163 2 586 260 130 47 chr10 47481146 47481554 -92835211 + L2 LINE L2 2818 3259 -54 598 315 30 39 chr10 47481947 47482203 -92834562 + MIR SINE MIR 4 257 -5 336 270 69 82 chr10 47482285 47482603 -92834162 + L2 LINE L2 2988 3301 -12 839 182 30 21 chr10 47485632 47485868 -92830897 + Charlie5 DNA MER1_type 2369 2606 -6 665 212 70 24 chr10 47486268 47486495 -92830270 - L1ME LINE L1 -687 5477 5241 1665 190 0 3 chr10 47486499 47486810 -92829955 + AluSx SINE Alu 3 312 0 262 197 16 80 chr10 47486829 47487017 -92829748 + (CAAAG)n Simple_repeat Simple_repeat 3 178 0 * 346 144 48 68 chr10 47486905 47487051 -92829714 + (CACAG)n Simple_repeat Simple_repeat 2 144 0 228 35 0 0 chr10 47487051 47487080 -92829685 + (CAAAG)n Simple_repeat Simple_repeat 2 30 0 239 241 19 0 chr10 47487080 47487134 -92829631 + GA-rich Low_complexity Low_complexity 2 56 0 1247 300 39 12 chr10 47487135 47487695 -92829070 - L1ME LINE L1 -894 5252 4678 228 67 0 0 chr10 47487722 47487752 -92829013 + (TC)n Simple_repeat Simple_repeat 1 30 0 2616 206 41 141 chr10 47487770 47488091 -92828674 + L1MD3 LINE L1 6151 6503 159 602 214 24 1 chr10 47488091 47488221 -92828544 + MLT1F1 LTR MaLR 1 133 -442 2616 206 41 141 chr10 47488221 47488386 -92828379 + L1MD3 LINE L1 6503 5878 -466 1689 157 71 41 chr10 47488386 47488750 -92828015 + THE1C LTR MaLR 1 375 0 2616 206 41 141 chr10 47488750 47489176 -92827589 + L1MD3 LINE L1 5877 6344 0 293 193 24 72 chr10 47489924 47490007 -92826758 - MIR SINE MIR -67 195 117 808 273 39 19 chr10 47490387 47490643 -92826122 + L2 LINE L2 2820 3080 -233 227 255 50 99 chr10 47490771 47490932 -92825833 - MIR SINE MIR -61 201 49 180 198 20 139 chr10 47491570 47491671 -92825094 - MIR SINE MIR -2 260 172 208 300 0 0 chr10 47492678 47492728 -92824037 - MIR SINE MIR -12 250 201 1991 130 0 10 chr10 47492903 47493204 -92823561 + AluSx SINE Alu 1 298 -14 4941 164 33 16 chr10 47494870 47495891 -92820874 - L1MB3 LINE L1 -7 6176 5137 407 233 196 8 chr10 47496056 47496189 -92820576 + MER5A DNA MER1_type 26 183 -6 404 294 39 39 chr10 47496587 47496740 -92820025 + L1MC/D LINE L1 3851 4003 -2143 288 319 53 31 chr10 47496810 47497036 -92819729 + L1MC/D LINE L1 4901 5131 -1015 369 279 39 51 chr10 47497143 47497413 -92819352 + L1MC/D LINE L1 5282 5559 -562 221 255 0 0 chr10 47497542 47497593 -92819172 + (TATG)n Simple_repeat Simple_repeat 2 52 0 22 48 0 48 chr10 47497764 47497826 -92818939 + AT_rich Low_complexity Low_complexity 1 59 0 277 259 259 14 chr10 47500198 47500337 -92816428 + MIR SINE MIR 79 251 -11 2194 122 30 43 chr10 47500504 47500899 -92815866 + MLT1B LTR MaLR 1 390 0 287 264 28 28 chr10 47502023 47502095 -92814670 + MER91B DNA MER1_type 119 190 0 2221 256 100 6 chr10 47503097 47503800 -92812965 - L1ME1 LINE L1 0 6166 5398 197 154 51 0 chr10 47506205 47506244 -92810521 - L2 LINE L2 -1035 2279 2239 228 247 0 68 chr10 47507080 47507153 -92809612 + MIR SINE MIR 195 262 0 580 234 58 109 chr10 47507354 47507861 -92808904 + L2 LINE L2 2694 3201 -112 224 291 71 55 chr10 47507875 47508002 -92808763 - MIR SINE MIR -73 189 61 329 244 87 26 chr10 47508083 47508198 -92808567 + MER63 DNA MER1_type 6 753 -83 288 53 0 0 chr10 47508556 47508594 -92808171 + (GA)n Simple_repeat Simple_repeat 2 39 0 840 298 62 21 chr10 47508605 47508977 -92807788 + L1MC4a LINE L1 5496 5882 -1926 26 0 0 0 chr10 47559572 47559598 -92757167 + AT_rich Low_complexity Low_complexity 1 26 0 2193 94 3 13 chr10 47559762 47560060 -92756705 - AluY SINE Alu -16 295 1 22 0 0 0 chr10 47560303 47560325 -92756440 + AT_rich Low_complexity Low_complexity 1 22 0 459 98 0 0 chr10 47560848 47560909 -92755856 - MLT1B LTR MaLR 0 390 330 456 167 0 14 chr10 47560910 47560982 -92755783 - MER1A DNA MER1_type -6 527 457 704 118 0 10 chr10 47560995 47561097 -92755668 - LTR12 LTR ERV1 -133 581 481 235 265 31 20 chr10 47561099 47561197 -92755568 - LTR30 LTR ERV1 -80 642 544 1007 91 141 18 chr10 47561205 47561375 -92755390 - LTR12 LTR ERV1 -421 2017 100 271 189 0 19 chr10 47561375 47561428 -92755337 - LTR30 LTR ERV1 -670 52 1 2711 86 59 11 chr10 47561428 47561799 -92754966 - MER1A DNA MER1_type -80 449 61 8854 50 0 0 chr10 47561981 47563086 -92753679 + L1P LINE L1 2114 3218 -2928 6449 128 11 14 chr10 47563236 47564229 -92752536 + HSMAR2 DNA Mariner 312 1301 -1 2550 125 14 5 chr10 47564981 47565414 -92751351 + L1PA15-16 LINE L1 1880 2316 -4533 3388 194 36 20 chr10 47565419 47566491 -92750274 + L1PA15-16 LINE L1 2372 3478 -3371 5226 25 2 0 chr10 47566682 47567282 -92749483 - L1P LINE L1 -1574 4572 3972 4802 34 0 0 chr10 47567278 47567835 -92748930 + L1PA5 LINE L1 5301 5857 -297 * 2913 181 19 6 chr10 47568016 47568634 -92748131 + L1MA9 LINE L1 5580 6302 -10 1488 138 0 4 chr10 47569010 47569241 -92747524 + AluSq SINE Alu 82 311 -2 22 35 0 0 chr10 47569968 47569997 -92746768 + AT_rich Low_complexity Low_complexity 1 29 0 330 317 81 16 chr10 47570641 47570827 -92745938 - MIR SINE MIR -11 251 54 880 251 77 40 chr10 47573289 47573714 -92743051 - MLT1C LTR MaLR -15 452 10 244 311 67 15 chr10 47574268 47574403 -92742362 + MIR SINE MIR 121 262 0 1290 216 69 45 chr10 47576499 47577063 -92739702 - LTR48 LTR ERV1 -7 771 14 955 230 156 14 chr10 47578042 47578394 -92738371 - MLT1D LTR MaLR -12 493 92 626 210 45 38 chr10 47578401 47578558 -92738207 - MIR SINE MIR -51 211 54 511 266 141 5 chr10 47579686 47579885 -92736880 - MLT1D LTR MaLR -4 501 276 261 292 52 99 chr10 47581735 47581927 -92734838 + MIR SINE MIR 25 207 -55 1931 105 7 35 chr10 47582111 47582396 -92734369 - AluSx SINE Alu -1 311 35 393 248 92 0 chr10 47582454 47582598 -92734167 - MLT1C LTR MaLR -57 410 276 4212 138 5 3 chr10 47582824 47583491 -92733274 - LTR39 LTR ERV1 -80 703 36 267 180 11 45 chr10 47584501 47584590 -92732175 + CT-rich Low_complexity Low_complexity 4 89 0 327 312 64 0 chr10 47584590 47584699 -92732066 - L2 LINE L2 -20 3252 3137 381 293 30 10 chr10 47585323 47585499 -92731266 - MIR SINE MIR -62 146 12 285 274 24 0 chr10 47585499 47585583 -92731182 + MER5A DNA MER1_type 1 86 -103 327 289 76 76 chr10 47585720 47585806 -92730959 + L3 LINE CR1 1310 1395 -182 2221 123 3 0 chr10 47585806 47586106 -92730659 - AluSx SINE Alu -11 301 1 327 289 76 76 chr10 47586106 47586230 -92730535 + L3 LINE CR1 1394 1520 -57 5974 243 52 17 chr10 47586957 47587759 -92729006 - L1MC/D LINE L1 -669 5690 4918 1988 146 104 11 chr10 47587759 47588116 -92728649 + MLT1B LTR MaLR 1 390 0 5974 243 52 17 chr10 47588116 47588994 -92727771 - L1MC/D LINE L1 -1441 4918 3899 2277 89 0 14 chr10 47588994 47589287 -92727478 - AluY SINE Alu -15 296 8 5974 243 52 17 chr10 47589287 47589914 -92726851 - L1MC/D LINE L1 -2460 3899 3296 364 267 0 11 chr10 47590753 47590843 -92725922 + MIR SINE MIR 145 233 -29 479 62 0 0 chr10 47591032 47591122 -92725643 + L1PA5 LINE L1 6088 6154 0 186 376 95 11 chr10 47591200 47591389 -92725376 + L2 LINE L2 2640 2844 -470 354 274 113 0 chr10 47591413 47591519 -92725246 + L2 LINE L2 3196 3313 0 206 273 0 0 chr10 47591725 47591769 -92724996 - MER91 DNA MER1_type -15 125 82 222 252 83 15 chr10 47592256 47592360 -92724405 - MIR SINE MIR -58 150 69 181 239 124 71 chr10 47592954 47593067 -92723698 - MIR SINE MIR -83 179 61 254 162 59 88 chr10 47593328 47593396 -92723369 - MIR SINE MIR -113 149 84 210 340 39 10 chr10 47594007 47594110 -92722655 - MIR SINE MIR -110 152 47 798 97 15 24 chr10 47594687 47594828 -92721937 + L1M3 LINE L1 5398 5544 -630 236 329 20 34 chr10 47595345 47595491 -92721274 + MLT1H1 LTR MaLR 162 305 -285 1941 128 24 7 chr10 47595546 47595836 -92720929 - AluSx SINE Alu -1 311 17 2153 138 64 20 chr10 47595838 47596230 -92720535 - MSTA LTR MaLR -19 409 1 439 208 2 71 chr10 47596281 47596412 -92720353 + MLT1H1 LTR MaLR 428 554 -1 376 351 11 67 chr10 47597276 47597544 -92719221 + L2 LINE L2 3005 3257 -15 1762 168 83 32 chr10 47598801 47599175 -92717590 + MSTD LTR MaLR 2 394 -2 3483 257 73 88 chr10 47599545 47600100 -92716665 + L1MEc LINE L1 125 687 -5709 599 209 139 0 chr10 47600100 47600272 -92716493 - MER3 DNA MER1_type 0 209 14 3483 257 73 88 chr10 47600272 47600874 -92715891 + L1MEc LINE L1 687 1296 -5100 2389 142 48 19 chr10 47600874 47601250 -92715515 + MSTA LTR MaLR 1 392 -36 2972 13 0 0 chr10 47601250 47601567 -92715198 - AluYb8 SINE Alu -1 317 1 2389 142 48 19 chr10 47601567 47601606 -92715159 + MSTA LTR MaLR 392 428 0 3483 257 73 88 chr10 47601606 47602685 -92714080 + L1MEc LINE L1 1296 2497 -3899 1352 223 22 3 chr10 47602708 47602785 -92713980 + L1MEc LINE L1 2529 2603 -3612 2330 148 35 46 chr10 47602785 47602827 -92713938 - MSTA LTR MaLR 0 428 387 2193 136 0 16 chr10 47602827 47603144 -92713621 + AluSx SINE Alu 1 312 0 2330 148 35 46 chr10 47603144 47603534 -92713231 - MSTA LTR MaLR -41 387 1 1352 223 22 3 chr10 47603534 47603819 -92712946 + L1MEc LINE L1 2603 2898 -3317 2550 217 35 10 chr10 47603823 47604403 -92712362 + L1MB3 LINE L1 15 608 -6957 10397 202 20 6 chr10 47604406 47607340 -92709425 + L1MB3 LINE L1 3825 6859 -743 558 128 0 0 chr10 47607341 47607419 -92709346 + AluS SINE Alu 2 79 -233 237 312 11 11 chr10 47607617 47607710 -92709055 + L1MB3 LINE L1 6855 6947 -2514 543 234 35 12 chr10 47607748 47607919 -92708846 - MLT1F LTR MaLR 0 542 368 660 262 145 14 chr10 47608112 47608326 -92708439 + MIR SINE MIR 13 254 -8 486 238 46 121 chr10 47609009 47609133 -92707632 + L2 LINE L2 3045 3138 -175 2391 150 53 7 chr10 47609133 47609546 -92707219 - MSTB1 LTR MaLR 0 432 1 486 238 46 121 chr10 47609546 47609702 -92707063 + L2 LINE L2 3138 3304 -9 221 149 0 64 chr10 47609706 47609753 -92707012 + (GGGA)n Simple_repeat Simple_repeat 2 45 0 266 164 50 46 chr10 47610607 47610697 -92706068 + MLT1F LTR MaLR 215 322 -273 449 216 28 42 chr10 47610770 47610921 -92705844 + MLT1F LTR MaLR 394 590 0 200 253 158 32 chr10 47611168 47611263 -92705502 - MIR SINE MIR -109 153 47 1213 219 147 44 chr10 47612631 47613121 -92703644 - MLT1F1 LTR MaLR -12 555 1 180 97 0 0 chr10 47613195 47613226 -92703539 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 423 323 35 30 chr10 47615352 47615553 -92701212 + MIR SINE MIR 58 259 -3 236 312 230 6 chr10 47615806 47616136 -92700629 + Tigger8 DNA MER2_type 54 457 -209 528 181 9 0 chr10 47616284 47616389 -92700376 + L1MB3 LINE L1 7158 7263 -339 987 197 137 4 chr10 47616869 47617103 -92699662 + L1ME4a LINE L1 5372 5636 -538 351 217 99 81 chr10 47617303 47617331 -92699434 + L1ME4a LINE L1 5797 5823 -298 2196 122 3 0 chr10 47617331 47617626 -92699139 + AluSg SINE Alu 1 296 -14 351 217 99 81 chr10 47617626 47617758 -92699007 + L1ME4a LINE L1 5823 5960 -161 647 138 8 39 chr10 47617796 47617926 -92698839 - L1MC1 LINE L1 0 6333 6208 279 203 0 0 chr10 47619062 47619141 -92697624 + (CA)n Simple_repeat Simple_repeat 1 79 0 180 303 0 66 chr10 47619292 47619368 -92697397 - L2 LINE L2 -278 3035 2965 456 279 0 0 chr10 47619619 47619723 -92697042 - MIR SINE MIR -111 151 48 309 320 32 8 chr10 47620386 47620511 -92696254 + MIR SINE MIR 23 150 -58 635 177 115 0 chr10 47620570 47620700 -92696065 - MER5A DNA MER1_type -43 146 2 340 299 31 0 chr10 47620892 47620989 -92695776 + MER5A DNA MER1_type 61 160 -29 213 330 0 50 chr10 47621346 47621446 -92695319 + MER5B DNA MER1_type 15 109 -69 4085 146 43 12 chr10 47621685 47622394 -92694371 + L1MB2 LINE L1 5386 6122 -49 2244 113 3 3 chr10 47622394 47622703 -92694062 + AluSx SINE Alu 1 309 -3 4085 146 43 12 chr10 47622703 47622754 -92694011 + L1MB2 LINE L1 6122 6170 -1 1828 170 0 35 chr10 47622834 47623151 -92693614 + AluJo SINE Alu 1 306 -6 196 263 200 0 chr10 47623655 47623735 -92693030 + L2 LINE L2 3161 3256 -16 203 167 0 0 chr10 47624122 47624158 -92692607 + L2 LINE L2 3262 3297 -16 500 282 106 8 chr10 47624620 47624865 -92691900 - MER102a DNA MER1_type -3 327 59 1443 257 144 70 chr10 47626675 47627949 -92688816 - L1MC5 LINE L1 -139 7822 6451 1618 158 94 0 chr10 47627951 47628249 -92688516 + LTR47A LTR ERVL 31 356 -96 336 291 173 33 chr10 47628437 47628835 -92687930 - L1MC4a LINE L1 -1577 6231 5778 327 274 258 0 chr10 47628992 47629116 -92687649 - MIR SINE MIR -48 214 59 411 275 135 22 chr10 47629360 47629539 -92687226 + MIR SINE MIR 56 256 -6 696 182 0 0 chr10 47629647 47629779 -92686986 + MER5A DNA MER1_type 7 138 -51 657 269 45 53 chr10 47629842 47630218 -92686547 - L2 LINE L2 -77 3236 2864 306 309 83 8 chr10 47630533 47630695 -92686070 + MIR SINE MIR 20 189 -62 1378 202 41 3 chr10 47631030 47631348 -92685417 - MER33 DNA MER1_type 0 324 1 937 237 53 50 chr10 47631350 47631687 -92685078 + MER58B DNA MER1_type 1 338 -3 345 263 161 29 chr10 47632378 47632596 -92684169 + MIR SINE MIR 14 251 -11 204 260 41 27 chr10 47632698 47632771 -92683994 + MIR SINE MIR 189 262 0 240 221 15 118 chr10 47634221 47634357 -92682408 - MER113 DNA MER1_type? -395 126 5 285 326 32 0 chr10 47634423 47634518 -92682247 - MIR SINE MIR -112 150 53 782 204 117 0 chr10 47637040 47637202 -92679563 + MER58A DNA MER1_type 44 224 0 22 35 0 0 chr10 47637231 47637260 -92679505 + AT_rich Low_complexity Low_complexity 1 29 0 283 345 61 0 chr10 47639280 47639450 -92677315 - MIR SINE MIR -57 151 21 388 251 194 10 chr10 47639628 47639825 -92676940 + MIR SINE MIR 9 242 -20 439 229 67 0 chr10 47641050 47641155 -92675610 + MIR SINE MIR 30 141 -121 26 0 0 0 chr10 47642235 47642261 -92674504 + AT_rich Low_complexity Low_complexity 1 26 0 301 279 108 34 chr10 47642610 47642814 -92673951 - MER112 DNA MER1_type -7 253 35 298 150 83 17 chr10 47644460 47644520 -92672245 - MER63 DNA MER1_type -129 707 18 310 330 37 0 chr10 47645430 47645539 -92671226 + L2 LINE L2 3160 3272 0 1389 194 43 69 chr10 47645970 47646316 -92670449 + MLT1A1 LTR MaLR 1 337 -28 338 323 13 53 chr10 47647218 47647400 -92669365 + MIR SINE MIR 20 192 -65 375 23 0 0 chr10 47647556 47647600 -92669165 + (ATG)n Simple_repeat Simple_repeat 3 46 0 764 184 25 12 chr10 47647625 47647788 -92668977 - MER53 DNA DNA -24 165 1 400 309 104 73 chr10 47649760 47650355 -92666410 - L2 LINE L2 -2 3270 2649 21 0 0 0 chr10 47651991 47652012 -92664753 + AT_rich Low_complexity Low_complexity 1 21 0 2050 156 0 0 chr10 47652554 47652849 -92663916 + AluSx SINE Alu 1 295 -17 236 338 80 13 chr10 47654023 47654174 -92662591 - MLT1L LTR MaLR -81 534 374 1153 207 121 75 chr10 47654181 47654349 -92662416 + MLT1C LTR MaLR 1 160 -307 1585 220 0 0 chr10 47654349 47654622 -92662143 + AluJb SINE Alu 1 273 -39 1153 207 121 75 chr10 47654622 47654892 -92661873 + MLT1C LTR MaLR 160 459 -8 1940 156 3 31 chr10 47658225 47658584 -92658181 + L1M3 LINE L1 5443 5791 -380 404 254 3 9 chr10 47658584 47658700 -92658065 + L1MC4 LINE L1 6614 6703 -1339 1886 153 46 3 chr10 47658701 47659073 -92657692 + L1MB2 LINE L1 5783 6170 -1 832 191 69 39 chr10 47659591 47659795 -92656970 - MLT2D LTR ERVL 0 414 205 2380 195 18 23 chr10 47659799 47660363 -92656402 - L1MA10 LINE L1 0 6334 5774 2305 147 40 0 chr10 47660541 47660963 -92655802 + L1MB3 LINE L1 5741 6179 -4 24 0 0 0 chr10 47660963 47660987 -92655778 + AT_rich Low_complexity Low_complexity 1 24 0 1401 196 5 91 chr10 47661068 47661466 -92655299 + MLT1A2 LTR MaLR 11 374 0 824 232 71 25 chr10 47661564 47661987 -92654778 + L1MD3 LINE L1 5907 7994 -1 4423 163 13 18 chr10 47661992 47662844 -92653921 + L1MA4 LINE L1 5453 6300 0 329 226 0 4 chr10 47663187 47663260 -92653505 - MIR SINE MIR -47 161 90 559 239 38 19 chr10 47663823 47663982 -92652783 - MIR SINE MIR -55 207 46 23 0 0 0 chr10 47665341 47665364 -92651401 + AT_rich Low_complexity Low_complexity 1 23 0 385 221 144 0 chr10 47666218 47666322 -92650443 - MIR SINE MIR -64 198 80 478 326 21 0 chr10 47666917 47667058 -92649707 + MIR SINE MIR 73 216 -46 26 30 0 0 chr10 47667343 47667376 -92649389 + AT_rich Low_complexity Low_complexity 1 33 0 454 214 103 24 chr10 47670259 47670385 -92646380 + MIR SINE MIR 47 182 -80 1584 224 101 47 chr10 47670407 47670738 -92646027 + MER119 DNA MER1_type 8 376 -207 1770 176 0 34 chr10 47670738 47671061 -92645704 + AluJo SINE Alu 1 312 0 1584 224 101 47 chr10 47671061 47671224 -92645541 + MER119 DNA MER1_type 376 529 -54 336 302 14 14 chr10 47672354 47672493 -92644272 + L1ME4a LINE L1 5983 6121 0 1635 202 35 3 chr10 47673055 47673431 -92643334 + L1MB2 LINE L1 5784 6171 0 2217 122 0 0 chr10 47673787 47674082 -92642683 + AluSx SINE Alu 1 295 -17 271 338 240 11 chr10 47674187 47674628 -92642137 + L3 LINE CR1 519 1060 -517 1156 144 0 22 chr10 47675035 47675174 -92641591 + AluJo SINE Alu 1 137 -175 2358 109 0 0 chr10 47675174 47675478 -92641287 + AluSx SINE Alu 1 304 -8 1156 144 0 22 chr10 47675478 47675519 -92641246 + AluJo SINE Alu 137 177 -135 183 42 0 0 chr10 47676629 47676653 -92640112 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 356 125 0 0 chr10 47676674 47676730 -92640035 + U6 snRNA snRNA 1 56 -51 38 22 0 0 chr10 47676730 47676775 -92639990 + AT_rich Low_complexity Low_complexity 1 45 0 309 284 61 14 chr10 47676833 47676981 -92639784 + L1ME4a LINE L1 5715 5869 -252 247 294 6 47 chr10 47677056 47677086 -92639679 + (CATATA)n Simple_repeat Simple_repeat 4 34 -132 1906 178 30 36 chr10 47677086 47677451 -92639314 + MLT1A1 LTR MaLR 1 363 -2 247 294 6 47 chr10 47677451 47677590 -92639175 + (CATATA)n Simple_repeat Simple_repeat 34 166 0 288 268 98 0 chr10 47677686 47677798 -92638967 + L1ME4a LINE L1 5986 6108 -13 245 282 71 0 chr10 47679015 47679100 -92637665 + MIR SINE MIR 48 138 -70 205 320 145 60 chr10 47679648 47679979 -92636786 + L2 LINE L2 2909 3267 -5 731 292 121 11 chr10 47680296 47680771 -92635994 + MLT1H1 LTR MaLR 1 524 -31 796 268 46 62 chr10 47680790 47681226 -92635539 + L1M4 LINE L1 3658 4086 -2060 972 191 99 22 chr10 47681227 47681500 -92635265 + L1MB8 LINE L1 5884 6177 -1 603 249 57 6 chr10 47681505 47681682 -92635083 + L1M4 LINE L1 4076 4261 -1885 380 192 0 0 chr10 47681694 47681767 -92634998 + L1ME3A LINE L1 5854 5926 -244 216 181 0 42 chr10 47681768 47681840 -92634925 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 1017 184 50 5 chr10 47681864 47682082 -92634683 + MER46A DNA MER2_type 2 229 -7 25 31 0 0 chr10 47682314 47682346 -92634419 + AT_rich Low_complexity Low_complexity 1 32 0 526 322 5 45 chr10 47683803 47684005 -92632760 - MIR SINE MIR -23 239 46 261 233 17 17 chr10 47685183 47685243 -92631522 + MIR SINE MIR 86 145 -63 185 333 32 45 chr10 47685578 47685734 -92631031 + L2 LINE L2 2839 2992 -280 653 276 102 21 chr10 47686467 47686488 -92630277 + Charlie8 DNA MER1_type 87 105 -2312 1285 208 85 18 chr10 47686488 47686830 -92629935 + MLT1A1 LTR MaLR 1 365 0 653 276 102 21 chr10 47686830 47687141 -92629624 + Charlie8 DNA MER1_type 105 446 -1971 233 216 54 27 chr10 47688337 47688411 -92628354 + L2 LINE L2 2917 2992 -280 222 37 0 0 chr10 47688482 47688509 -92628256 + (TG)n Simple_repeat Simple_repeat 2 28 0 233 313 106 25 chr10 47689890 47690088 -92626677 - MER112 DNA MER1_type -18 242 29 2087 143 0 13 chr10 47690285 47690599 -92626166 + AluSx SINE Alu 1 310 -2 653 260 20 0 chr10 47690674 47690820 -92625945 - MIR SINE MIR -77 185 37 225 94 0 0 chr10 47692733 47692765 -92624000 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 299 329 34 58 chr10 47693601 47693819 -92622946 + MIR SINE MIR 3 211 -51 315 313 57 34 chr10 47695618 47695794 -92620971 + L1MC1 LINE L1 5271 5450 -720 465 308 63 3 chr10 47695866 47696200 -92620565 + L1MC1 LINE L1 5524 5902 -1906 21 57 0 0 chr10 47698908 47698943 -92617822 + GC_rich Low_complexity Low_complexity 1 35 0 212 265 29 15 chr10 47703659 47703727 -92613038 + MIR SINE MIR 85 153 -109 1204 189 107 31 chr10 47703742 47703767 -92612998 + L1MC1 LINE L1 5992 6014 -319 2427 81 0 0 chr10 47703767 47704063 -92612702 + AluSc SINE Alu 1 296 -13 1204 189 107 31 chr10 47704063 47704355 -92612410 + L1MC1 LINE L1 6014 6333 0 453 177 26 0 chr10 47705046 47705159 -92611606 + CT-rich Low_complexity Low_complexity 1 116 0 639 223 16 0 chr10 47706331 47706582 -92610183 + CT-rich Low_complexity Low_complexity 1 255 0 818 161 24 0 chr10 47706593 47706843 -92609922 + CT-rich Low_complexity Low_complexity 1 256 0 279 229 173 78 chr10 47707792 47707971 -92608794 + L2 LINE L2 3118 3313 0 411 227 6 28 chr10 47708636 47708812 -92607953 + CT-rich Low_complexity Low_complexity 4 175 0 822 108 108 0 chr10 47709428 47709548 -92607217 + AluJb SINE Alu 11 143 -169 228 200 35 0 chr10 47710793 47710878 -92605887 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 321 302 99 36 chr10 47711233 47711485 -92605280 + L2 LINE L2 2942 3209 -104 419 267 42 61 chr10 47713611 47713776 -92602989 - MIR SINE MIR -54 208 47 385 292 53 29 chr10 47714092 47714263 -92602502 - L1ME4a LINE L1 0 6121 5947 618 60 0 0 chr10 47714368 47714451 -92602314 + (TGGA)n Simple_repeat Simple_repeat 1 83 0 190 186 136 17 chr10 47715029 47715088 -92601677 - L2 LINE L2 -2 3270 3205 198 294 13 26 chr10 47715174 47715251 -92601514 - MIR SINE MIR -74 134 69 498 256 146 0 chr10 47716042 47716179 -92600586 + MIR SINE MIR 33 189 -73 1042 185 9 51 chr10 47716248 47716464 -92600301 - AluJo SINE Alu -105 207 1 1437 145 112 0 chr10 47716464 47716713 -92600052 + Tigger3(Golem) DNA MER2_type 2762 3038 0 360 213 27 0 chr10 47716962 47717037 -92599728 + MIR SINE MIR 112 188 -74 251 225 50 38 chr10 47717377 47717457 -92599308 + L1MC4 LINE L1 6738 6818 -1224 2199 216 187 10 chr10 47717708 47718506 -92598259 + L1MC4 LINE L1 6970 7908 -134 364 137 10 39 chr10 47718542 47718644 -92598121 + GA-rich Low_complexity Low_complexity 2 100 0 386 283 17 8 chr10 47718653 47718773 -92597992 + L1MC4 LINE L1 7922 8042 0 366 259 247 12 chr10 47719450 47719709 -92597056 + L1ME4a LINE L1 5756 6075 -46 1308 236 147 55 chr10 47720020 47721323 -92595442 - L1M4c LINE L1 -3916 3043 1622 1281 204 101 75 chr10 47721317 47721705 -92595060 - L1M4c LINE L1 -6458 401 4 * 247 308 60 30 chr10 47721787 47722021 -92594744 + L1M4 LINE L1 4700 4940 -1206 636 316 67 39 chr10 47722194 47722625 -92594140 + L1ME LINE L1 4383 4825 -1321 314 259 72 76 chr10 47722728 47722964 -92593801 + L1ME LINE L1 5297 5531 -631 482 286 68 13 chr10 47723271 47723554 -92593211 - MLT1J LTR MaLR -179 332 3 23 0 0 0 chr10 47725783 47725806 -92590959 + AT_rich Low_complexity Low_complexity 1 23 0 1796 100 115 7 chr10 47727591 47727861 -92588904 + AluSg1 SINE Alu 1 299 -10 432 301 101 28 chr10 47728622 47729020 -92587745 + L1MC4a LINE L1 4232 4658 -1488 991 214 78 56 chr10 47729309 47729919 -92586846 + L1MC4a LINE L1 4988 5637 -786 2175 149 3 3 chr10 47730003 47730345 -92586420 - MER46B DNA MER2_type 0 236 20 1542 194 141 95 chr10 47730382 47730545 -92586220 + L1MC4a LINE L1 5819 5973 -1835 2294 155 14 17 chr10 47730545 47730906 -92585859 + THE1B LTR MaLR 3 362 -2 12730 91 1 1 chr10 47730911 47732488 -92584277 + THE1B-int LTR MaLR 4 1580 0 2372 129 34 17 chr10 47732489 47732846 -92583919 + THE1B LTR MaLR 2 364 0 1542 194 141 95 chr10 47732846 47733410 -92583355 + L1MC4a LINE L1 5975 6588 -1220 2836 207 98 51 chr10 47733430 47733751 -92583014 - L1ME1 LINE L1 -6 6160 5855 2022 100 22 0 chr10 47733751 47734021 -92582744 - AluSx SINE Alu -24 288 13 2836 207 98 51 chr10 47734021 47734519 -92582246 - L1ME1 LINE L1 -311 5855 5303 1830 168 3 10 chr10 47734522 47734820 -92581945 - AluJb SINE Alu -16 296 1 1797 249 59 35 chr10 47734821 47735510 -92581255 - L1MEc LINE L1 -5578 818 36 3254 184 101 39 chr10 47735559 47736332 -92580433 + L1MC4 LINE L1 6654 7474 -568 328 173 68 179 chr10 47736327 47736489 -92580276 + L1MC4 LINE L1 7895 8038 -4 * 24 32 0 0 chr10 47740150 47740181 -92576584 + AT_rich Low_complexity Low_complexity 1 31 0 182 276 53 66 chr10 47740749 47740825 -92575940 - MER5B DNA MER1_type -8 170 96 757 147 0 9 chr10 47742056 47742172 -92574593 + MER33 DNA MER1_type 1 115 -209 197 107 0 0 chr10 47742715 47742743 -92574022 + MIR SINE MIR 113 140 -68 224 30 30 0 chr10 47743990 47744023 -92572742 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 43470 54 2 2 chr10 47744023 47750162 -92566603 - L1PA5 LINE L1 -16 6138 3 2240 133 154 0 chr10 47750558 47750927 -92565838 - MSTB LTR MaLR 0 426 1 545 248 18 28 chr10 47751138 47751307 -92565458 - L1MC4 LINE L1 -95 7713 7633 231 267 86 9 chr10 47751330 47751435 -92565330 - L1MC4 LINE L1 -396 7646 7534 1921 146 3 3 chr10 47752200 47752502 -92564263 - AluJb SINE Alu -10 302 1 1104 203 20 0 chr10 47753632 47753829 -92562936 - MSTB LTR MaLR -213 213 13 240 201 110 24 chr10 47754453 47754617 -92562148 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 912 155 124 0 chr10 47754693 47754854 -92561911 + AluJo SINE Alu 121 301 -11 1077 188 89 7 chr10 47754854 47755136 -92561629 - MER33 DNA MER1_type -19 305 1 4295 128 43 22 chr10 47755374 47755551 -92561214 - Ricksha DNA DNA -8 3238 3066 1549 143 4 23 chr10 47755551 47755810 -92560955 + AluSx SINE Alu 44 297 -15 4295 128 43 22 chr10 47755810 47756350 -92560415 - Ricksha DNA DNA -180 3066 2506 1624 160 115 0 chr10 47756349 47756637 -92560128 - Ricksha DNA DNA -933 321 1 * 231 221 113 92 chr10 47756655 47756850 -92559915 + L1ME3A LINE L1 522 720 -5652 379 98 0 33 chr10 47757248 47757309 -92559456 + L1MC1 LINE L1 6275 6333 0 576 257 68 64 chr10 47757392 47757498 -92559267 + L1ME3A LINE L1 1068 1172 -5200 1017 150 48 0 chr10 47757498 47757685 -92559080 + L1MA9 LINE L1 6116 6311 -1 576 257 68 64 chr10 47757685 47758017 -92558748 + L1ME3A LINE L1 1172 1508 -4864 2022 132 7 0 chr10 47758037 47758326 -92558439 + AluSx SINE Alu 1 291 -21 225 358 38 25 chr10 47758347 47758587 -92558178 + L1ME3A LINE L1 1430 1672 -4712 1949 97 35 68 chr10 47758994 47759305 -92557460 + AluSq SINE Alu 1 301 -12 1206 251 103 66 chr10 47759477 47760216 -92556549 + L1ME3A LINE L1 2511 3267 -3115 2372 93 6 10 chr10 47760216 47760529 -92556236 + AluSx SINE Alu 1 312 0 1206 251 103 66 chr10 47760529 47760667 -92556098 + L1ME3A LINE L1 3267 3398 -2984 734 284 61 13 chr10 47760636 47761030 -92555735 + L1ME3A LINE L1 5166 5578 -804 * 280 336 55 0 chr10 47761036 47761182 -92555583 + L1ME3A LINE L1 5616 5769 -631 363 323 23 0 chr10 47761211 47761344 -92555421 + L1ME3A LINE L1 5863 5998 -400 290 328 10 20 chr10 47761376 47761447 -92555318 + L1ME3A LINE L1 5996 6066 -340 2582 126 3 24 chr10 47761447 47761819 -92554946 + THE1B LTR MaLR 1 364 0 290 328 10 20 chr10 47761819 47761942 -92554823 + L1ME3A LINE L1 6066 6188 -218 728 142 0 0 chr10 47762408 47762521 -92554244 + MER2 DNA MER2_type 98 210 -135 2708 89 20 0 chr10 47762722 47763070 -92553695 - THE1A LTR MaLR 0 355 1 12389 94 6 3 chr10 47763070 47764646 -92552119 - THE1A-int LTR MaLR 0 1580 1 2921 77 6 0 chr10 47764646 47764999 -92551766 - THE1A LTR MaLR 0 355 1 2824 166 80 31 chr10 47767863 47768437 -92548328 + MER7C DNA MER2_type 1 602 0 480 274 61 114 chr10 47769326 47769930 -92546835 + L1MEd LINE L1 3904 4475 -1907 217 125 0 25 chr10 47770026 47770066 -92546699 - MIR SINE MIR -21 241 203 359 292 54 36 chr10 47770097 47770265 -92546500 + L1MEd LINE L1 12 182 -5937 256 314 118 33 chr10 47770299 47770452 -92546313 + L1MEd LINE L1 242 407 -5712 372 294 59 25 chr10 47770525 47770644 -92546121 + L1MEd LINE L1 465 587 -5532 279 0 0 0 chr10 47770727 47770758 -92546007 + (CA)n Simple_repeat Simple_repeat 1 31 0 487 223 37 17 chr10 47770762 47770993 -92545772 + L1MEd LINE L1 724 949 -5170 1459 164 9 116 chr10 47770993 47771329 -92545436 + AluJo SINE Alu 1 300 -12 487 223 37 17 chr10 47771329 47771504 -92545261 + L1MEd LINE L1 949 1238 -4881 4019 159 75 24 chr10 47771777 47771905 -92544860 - L1MB5 LINE L1 -43 6131 6011 2316 68 6 53 chr10 47771905 47772226 -92544539 + AluY SINE Alu 1 306 -5 4019 159 75 24 chr10 47772226 47772895 -92543870 - L1MB5 LINE L1 -163 6011 5293 7085 244 89 28 chr10 47772930 47774060 -92542705 - L1MB8 LINE L1 0 6178 5119 2204 100 59 0 chr10 47774060 47774349 -92542416 - AluSg SINE Alu -4 306 1 7085 244 89 28 chr10 47774349 47774370 -92542395 - L1MB8 LINE L1 -1059 5119 5101 1688 201 13 0 chr10 47774370 47774668 -92542097 - AluJb SINE Alu -10 302 1 7085 244 89 28 chr10 47774668 47775316 -92541449 - L1MB8 LINE L1 -1077 5101 4494 2505 68 0 0 chr10 47775316 47775610 -92541155 - AluY SINE Alu -17 294 1 7085 244 89 28 chr10 47775610 47777197 -92539568 - L1MB8 LINE L1 -1684 4494 2526 948 228 128 52 chr10 47779490 47779934 -92536831 + L2 LINE L2 2836 3313 0 209 224 20 0 chr10 47781226 47781275 -92535490 + (TATG)n Simple_repeat Simple_repeat 2 51 0 265 333 24 16 chr10 47781811 47781937 -92534828 + MIR3 SINE MIR 64 190 -18 2044 174 131 84 chr10 47782423 47783163 -92533602 + L1MC4 LINE L1 7266 8040 -2 21 0 0 0 chr10 47784367 47784388 -92532377 + AT_rich Low_complexity Low_complexity 1 21 0 43 35 0 0 chr10 47785569 47785626 -92531139 + AT_rich Low_complexity Low_complexity 1 57 0 2030 144 6 6 chr10 47785825 47786137 -92530628 + AluJb SINE Alu 1 312 0 1724 194 0 0 chr10 47786286 47786580 -92530185 + AluJo SINE Alu 1 294 -18 258 260 28 73 chr10 47786670 47786847 -92529918 + HAL1 LINE L1 1496 1664 -843 541 270 16 53 chr10 47786995 47787184 -92529581 - MIR SINE MIR -78 184 3 2415 77 3 3 chr10 47790601 47790911 -92525854 - AluY SINE Alu -1 310 1 370 326 73 30 chr10 47791143 47791376 -92525389 - MIR SINE MIR -2 260 18 2343 97 0 0 chr10 47792180 47792479 -92524286 - AluSg SINE Alu -9 301 3 276 315 54 36 chr10 47794219 47794330 -92522435 - L2 LINE L2 -23 3249 3137 784 250 71 28 chr10 47795956 47796168 -92520597 + MIR SINE MIR 21 241 -21 284 290 204 40 chr10 47796626 47797257 -92519508 + L2 LINE L2 2156 2890 -424 324 241 0 0 chr10 47797580 47797659 -92519106 + L1ME4a LINE L1 5970 6048 -73 2278 95 0 0 chr10 47797704 47798011 -92518754 + AluSq SINE Alu 1 307 0 21 36 0 0 chr10 47801310 47801338 -92515427 + AT_rich Low_complexity Low_complexity 1 28 0 1824 160 0 17 chr10 47802860 47803154 -92513611 + AluJb SINE Alu 11 299 -13 367 257 53 46 chr10 47803678 47803830 -92512935 - MIR SINE MIR -80 182 30 862 230 112 0 chr10 47803851 47804047 -92512718 + MER20 DNA MER1_type 1 218 -1 709 215 5 96 chr10 47808809 47809056 -92507709 + MER20 DNA MER1_type 1 219 0 740 262 36 18 chr10 47810218 47810439 -92506326 + MIR SINE MIR 24 248 -14 211 250 50 0 chr10 47810477 47810537 -92506228 - MIR SINE MIR -77 185 123 263 319 118 0 chr10 47811786 47811905 -92504860 + L2 LINE L2 3181 3313 0 1932 175 3 3 chr10 47812594 47812902 -92503863 - AluSx SINE Alu -4 308 1 198 385 52 0 chr10 47813215 47813311 -92503454 + L3 LINE CR1 889 989 -588 1805 100 159 0 chr10 47813790 47814099 -92502666 - MER46B DNA MER2_type -3 233 1 226 209 0 0 chr10 47814322 47814365 -92502400 - MIR SINE MIR -92 170 128 529 263 61 109 chr10 47814570 47814653 -92502112 - MIR SINE MIR -27 235 150 1951 130 68 8 chr10 47814653 47815007 -92501758 - THE1C LTR MaLR 0 375 1 529 263 61 109 chr10 47815007 47815170 -92501595 - MIR SINE MIR -112 150 1 328 47 0 0 chr10 47816292 47816335 -92500430 + MER85 DNA T2_type 1 43 -96 780 59 0 0 chr10 47818636 47818737 -92498028 + MER85 DNA T2_type 39 139 0 1364 132 44 5 chr10 47818817 47819021 -92497744 - AluJb SINE Alu -100 212 1 269 181 208 0 chr10 47819554 47819662 -92497103 + MIR SINE MIR 59 205 -57 199 313 35 61 chr10 47821344 47821459 -92495306 + MER5B DNA MER1_type 4 115 -63 384 260 99 11 chr10 47821775 47821956 -92494809 - MER117 DNA MER1_type 0 197 1 201 180 0 0 chr10 47825425 47825475 -92491290 + CT-rich Low_complexity Low_complexity 2 51 0 883 209 78 5 chr10 47826431 47826622 -92490143 - MER3 DNA MER1_type 0 209 5 951 244 152 14 chr10 47826833 47827258 -92489507 - L1ME3A LINE L1 -3 6167 5802 531 74 0 0 chr10 47827258 47827339 -92489426 + (TA)n Simple_repeat Simple_repeat 2 82 0 951 244 152 14 chr10 47827339 47827777 -92488988 - L1ME3A LINE L1 -368 5802 5122 1992 105 3 27 chr10 47828569 47828864 -92487901 + AluSq SINE Alu 1 288 -25 222 37 0 0 chr10 47829030 47829057 -92487708 + (CA)n Simple_repeat Simple_repeat 2 28 0 324 218 0 0 chr10 47831429 47831484 -92485281 + Tigger5 DNA MER2_type 1 55 -2268 * 388 186 14 14 chr10 47831456 47831526 -92485239 + Tigger5 DNA MER2_type 2254 2323 0 592 157 0 29 chr10 47831565 47831667 -92485098 + Tigger5 DNA MER2_type 2225 2323 0 192 281 0 0 chr10 47832271 47832328 -92484437 - L2 LINE L2 -1 3271 3215 1591 151 3 67 chr10 47834684 47834982 -92481783 + AluJb SINE Alu 1 279 -33 28 48 0 0 chr10 47834982 47835024 -92481741 + AT_rich Low_complexity Low_complexity 1 42 0 2222 135 0 0 chr10 47835034 47835346 -92481419 + AluSx SINE Alu 1 312 0 547 270 89 28 chr10 47835366 47835617 -92481148 + L1MC/D LINE L1 5443 5722 -520 269 216 196 0 chr10 47836675 47836772 -92479993 - MER113 DNA MER1_type? -202 319 204 198 254 18 91 chr10 47836956 47837024 -92479741 - L2 LINE L2 -1374 1940 1881 2148 93 31 3 chr10 47837024 47837313 -92479452 + AluSq SINE Alu 1 297 -16 198 254 18 91 chr10 47837313 47837354 -92479411 - L2 LINE L2 -1433 1881 1839 2486 68 3 0 chr10 47838247 47838554 -92478211 + AluSg SINE Alu 2 309 -1 242 296 269 0 chr10 47838554 47838662 -92478103 - L2 LINE L2 -2 3270 3134 276 30 0 0 chr10 47838685 47838718 -92478047 + (CA)n Simple_repeat Simple_repeat 2 34 0 1744 102 8 30 chr10 47838901 47839166 -92477599 - AluSq SINE Alu -16 297 39 214 364 107 27 chr10 47839432 47839693 -92477072 - L2 LINE L2 -475 2839 2558 23 0 0 0 chr10 47840057 47840080 -92476685 + GC_rich Low_complexity Low_complexity 1 23 0 2296 109 0 0 chr10 47841208 47841521 -92475244 - AluSq SINE Alu 0 313 1 313 230 150 0 chr10 47841708 47841808 -92474957 - LTR33 LTR ERVL -8 513 399 718 77 7 147 chr10 47841820 47841963 -92474802 + MLT1B LTR MaLR 1 123 -267 588 256 82 31 chr10 47842097 47842154 -92474611 - MER63A DNA MER1_type -1482 206 153 1427 207 58 28 chr10 47842154 47842517 -92474248 - MLT1A2 LTR MaLR 0 374 1 588 256 82 31 chr10 47842517 47842654 -92474111 - MER63A DNA MER1_type -1535 153 2 3439 174 43 48 chr10 47842915 47843301 -92473464 - LTR8A LTR ERV1 -5 722 340 2793 84 19 5 chr10 47843301 47843671 -92473094 - THE1C LTR MaLR 0 375 1 3439 174 43 48 chr10 47843671 47844010 -92472755 - LTR8A LTR ERV1 -387 340 1 4254 125 9 2 chr10 47844409 47845039 -92471726 - MER41B LTR ERV1 0 635 1 12068 96 28 34 chr10 47845039 47846765 -92470000 - MER41B-int LTR ERV1 0 5946 4231 2241 114 0 22 chr10 47846765 47847081 -92469684 + AluY SINE Alu 1 309 -2 12068 96 28 34 chr10 47847081 47847217 -92469548 - MER41B-int LTR ERV1 -1715 4231 4096 * 16412 113 54 18 chr10 47847203 47847672 -92469093 - MER41B-int LTR ERV1 -2189 3757 3306 1620 201 4 4 chr10 47847672 47848001 -92468764 - AluJb SINE Alu 0 331 3 16412 113 54 18 chr10 47848001 47850112 -92466653 - MER41B-int LTR ERV1 -2640 3306 1083 4648 117 6 3 chr10 47850102 47850735 -92466030 - MER41B-int LTR ERV1 -5311 635 1 * 4317 113 28 2 chr10 47850735 47851354 -92465411 - MER41B LTR ERV1 0 635 1 3728 123 34 90 chr10 47851354 47851522 -92465243 - LTR8 LTR ERV1 -2 689 513 2000 143 10 0 chr10 47851522 47851823 -92464942 - AluSx SINE Alu -8 304 1 3728 123 34 90 chr10 47851823 47851990 -92464775 - LTR8 LTR ERV1 -178 513 338 219 36 0 0 chr10 47851990 47852018 -92464747 + (G)n Simple_repeat Simple_repeat 1 28 0 3728 123 34 90 chr10 47852018 47852411 -92464354 - LTR8 LTR ERV1 -353 338 1 2414 89 0 3 chr10 47852714 47853018 -92463747 + AluSg SINE Alu 1 303 -7 2545 103 54 42 chr10 47853205 47853631 -92463134 - LTR23 LTR ERV1 -6 431 1 232 176 14 40 chr10 47853765 47853839 -92462926 + GA-rich Low_complexity Low_complexity 1 72 0 3027 163 73 51 chr10 47854245 47854956 -92461809 - LTR8A LTR ERV1 0 727 1 186 43 0 0 chr10 47855034 47855057 -92461708 + (TG)n Simple_repeat Simple_repeat 2 24 0 346 141 0 7 chr10 47855654 47855722 -92461043 - MLT2B3 LTR ERVL 0 554 450 325 221 19 38 chr10 47855722 47855880 -92460885 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 2521 172 90 28 chr10 47855884 47856385 -92460380 - MLT2B3 LTR ERVL -22 532 1 527 327 108 19 chr10 47856545 47857072 -92459693 - L2 LINE L2 -9 3304 2694 1611 192 26 0 chr10 47857074 47857376 -92459389 + L1M4 LINE L1 4777 5086 -1060 372 146 18 19 chr10 47857398 47857485 -92459280 - MLT1D LTR MaLR -46 573 365 253 262 208 38 chr10 47857483 47857666 -92459099 + MLT1H1 LTR MaLR 335 548 -7 * 1398 239 128 57 chr10 47859266 47859753 -92457012 + MER20B DNA MER1_type 74 606 -177 2403 93 0 0 chr10 47859753 47860054 -92456711 - AluSg SINE Alu -9 301 1 1398 239 128 57 chr10 47860054 47860113 -92456652 + MER20B DNA MER1_type 606 659 -124 438 20 0 0 chr10 47860125 47860176 -92456589 + (TG)n Simple_repeat Simple_repeat 2 52 0 764 228 53 42 chr10 47860625 47860926 -92455839 - MER4C LTR ERV1 0 695 273 1627 128 27 96 chr10 47860936 47861311 -92455454 - MER4A LTR ERV1 -315 349 1 494 243 115 14 chr10 47861347 47861495 -92455270 + LTR16A LTR ERVL 288 450 0 1518 201 5 72 chr10 47862488 47862886 -92453879 - MLT1A2 LTR MaLR 0 374 1 516 202 0 20 chr10 47862886 47862985 -92453780 + HERV16 LTR ERVL 1723 1819 -3177 700 204 41 68 chr10 47862989 47863210 -92453555 + LTR41 LTR ERVL 553 767 -6 3837 295 86 22 chr10 47863233 47863915 -92452850 - ERVL LTR ERVL -2827 2827 2190 1828 134 28 21 chr10 47863915 47864206 -92452559 + AluJb SINE Alu 12 304 -8 3837 295 86 22 chr10 47864206 47865651 -92451114 - ERVL LTR ERVL -3464 2190 540 881 212 21 74 chr10 47866127 47866410 -92450355 - LTR41 LTR ERVL -10 763 496 7921 162 44 11 chr10 47866499 47866920 -92449845 + L1PA13 LINE L1 3974 4380 -1783 249 83 0 0 chr10 47866920 47866956 -92449809 + (CA)n Simple_repeat Simple_repeat 1 36 0 7921 162 44 11 chr10 47866956 47868677 -92448088 + L1PA13 LINE L1 4380 6148 -15 2638 138 24 20 chr10 47868834 47869284 -92447481 - Tigger2 DNA MER2_type 0 2718 2267 459 174 0 0 chr10 47869268 47869337 -92447428 - Tigger2 DNA MER2_type -2649 69 1 * 423 314 29 34 chr10 47869379 47869583 -92447182 - MLT1-int LTR MaLR -477 894 692 1631 212 27 63 chr10 47869710 47870239 -92446526 - MLT1-int LTR MaLR -709 662 42 1343 171 74 119 chr10 47870239 47870701 -92446064 - LTR8A LTR ERV1 0 727 287 279 150 250 0 chr10 47870763 47870823 -92445942 - MER87 LTR ERV1 -360 181 107 219 171 84 15 chr10 47872767 47872834 -92443931 - MER5A DNA MER1_type -62 120 44 438 248 38 0 chr10 47872843 47872948 -92443817 - MIR SINE MIR 0 262 154 2736 200 25 52 chr10 47872949 47873589 -92443176 + MLT1E3 LTR MaLR 2 624 0 3538 130 44 38 chr10 47874182 47874812 -92441953 - MER51A LTR ERV1 0 634 1 623 288 109 45 chr10 47874882 47875305 -92441460 - L2 LINE L2 -1 3312 2863 5956 150 38 15 chr10 47875437 47875842 -92440923 - Tigger3b DNA MER2_type -1947 1081 687 1506 122 115 43 chr10 47875842 47876120 -92440645 + AluJb SINE Alu 1 298 -14 5956 150 38 15 chr10 47876120 47876558 -92440207 - Tigger3b DNA MER2_type -2341 687 207 1629 194 42 0 chr10 47876558 47876841 -92439924 - AluJo SINE Alu -17 295 1 5956 150 38 15 chr10 47876841 47877053 -92439712 - Tigger3b DNA MER2_type -2821 207 1 420 283 86 9 chr10 47877054 47877287 -92439478 - L2 LINE L2 -1092 2222 1972 2369 96 3 0 chr10 47877398 47877699 -92439066 + AluSx SINE Alu 1 302 -10 1725 174 0 10 chr10 47877923 47878222 -92438543 - AluJo SINE Alu -12 300 5 321 26 0 0 chr10 47878734 47878772 -92437993 + (TG)n Simple_repeat Simple_repeat 1 38 0 222 91 0 0 chr10 47878772 47878805 -92437960 + (GA)n Simple_repeat Simple_repeat 2 34 0 3688 154 65 19 chr10 47878805 47879481 -92437284 - L1MC1 LINE L1 -51 6282 5576 456 220 0 0 chr10 47879482 47879573 -92437192 + AluJ/FLAM SINE Alu 2 92 -220 2393 146 48 26 chr10 47879606 47880025 -92436740 - MSTA LTR MaLR 0 428 1 689 163 6 86 chr10 47880025 47880056 -92436709 - L1M3 LINE L1 -598 5582 5550 2096 119 41 0 chr10 47880056 47880351 -92436414 + AluSx SINE Alu 1 307 -5 689 163 6 86 chr10 47880351 47880473 -92436292 - L1M3 LINE L1 -630 5550 5444 3546 229 103 115 chr10 47880488 47881666 -92435099 + L1MEc LINE L1 54 1245 -4970 595 62 0 0 chr10 47881666 47881747 -92435018 + AluY SINE Alu 217 297 -14 3546 229 103 115 chr10 47881747 47882259 -92434506 + L1MEc LINE L1 1245 1762 -4453 703 185 8 0 chr10 47882259 47882378 -92434387 - MER20 DNA MER1_type 0 219 100 3546 229 103 115 chr10 47882378 47884007 -92432758 + L1MEc LINE L1 1762 3474 -2741 3886 229 58 33 chr10 47884145 47884555 -92432210 + L1MB5 LINE L1 2930 3328 -2818 1908 129 70 17 chr10 47884555 47884911 -92431854 - THE1C LTR MaLR 0 375 1 3886 229 58 33 chr10 47884911 47885615 -92431150 + L1MB5 LINE L1 3328 4089 -2057 1443 192 15 93 chr10 47885615 47886011 -92430754 + MLT1A1 LTR MaLR 1 365 0 3886 229 58 33 chr10 47886011 47886312 -92430453 + L1MB5 LINE L1 4089 4381 -1765 1166 187 91 118 chr10 47886312 47886615 -92430150 + MSTC LTR MaLR 2 312 -116 4109 126 18 1 chr10 47886615 47887284 -92429481 + L1MA6 LINE L1 5621 6300 0 1166 187 91 118 chr10 47887284 47887310 -92429455 + MSTC LTR MaLR 312 337 -91 2123 98 36 0 chr10 47887310 47887616 -92429149 + AluSx SINE Alu 1 316 0 1166 187 91 118 chr10 47887616 47887663 -92429102 + MSTC LTR MaLR 337 369 -59 2326 109 3 3 chr10 47887663 47887974 -92428791 + AluSq SINE Alu 1 311 -2 1166 187 91 118 chr10 47887974 47888033 -92428732 + MSTC LTR MaLR 369 428 0 4220 184 20 10 chr10 47888034 47889220 -92427545 + L1MB5 LINE L1 4383 5589 -585 3968 84 1 72 chr10 47889220 47889876 -92426889 + LTR66 LTR ERVL 1 610 0 4220 184 20 10 chr10 47889876 47890071 -92426694 + L1MB5 LINE L1 5589 5781 -393 684 232 73 0 chr10 47890069 47890233 -92426532 + L1MB5 LINE L1 5991 6166 -8 * 2382 98 0 0 chr10 47890246 47890542 -92426223 + AluSx SINE Alu 1 296 -16 545 268 70 8 chr10 47890602 47890845 -92425920 - L2 LINE L2 -892 2422 2165 2099 98 119 18 chr10 47890893 47891280 -92425485 - MSTA LTR MaLR -2 426 1 2668 236 50 18 chr10 47891282 47892638 -92424127 - L1 LINE L1 -2743 3639 2197 2199 132 7 0 chr10 47893450 47893753 -92423012 + AluSx SINE Alu 1 305 -7 369 174 0 0 chr10 47893775 47893844 -92422921 + GA-rich Low_complexity Low_complexity 3 71 0 520 160 0 0 chr10 47895720 47895814 -92420951 + AluSg/x SINE Alu 214 307 -2 587 188 88 44 chr10 47896186 47896346 -92420419 + MER5A DNA MER1_type 12 178 -11 447 324 88 0 chr10 47897385 47897589 -92419176 - MER102b DNA MER1_type 0 341 120 1033 226 59 36 chr10 47897878 47898318 -92418447 - LTR65 LTR ERV1 -20 649 167 730 230 0 12 chr10 47898557 47898718 -92418047 - FRAM SINE Alu -7 159 1 254 321 130 11 chr10 47899165 47899427 -92417338 - L2 LINE L2 -98 3215 2923 180 0 0 0 chr10 47899463 47899483 -92417282 + (CAGGG)n Simple_repeat Simple_repeat 2 21 0 1610 163 50 7 chr10 47900230 47900507 -92416258 - AluJo SINE Alu -23 289 1 633 230 53 7 chr10 47902034 47902186 -92414579 + MIR SINE MIR 25 183 -79 2482 93 0 3 chr10 47902678 47902989 -92413776 - AluSg SINE Alu 0 310 1 324 244 61 23 chr10 47903347 47903478 -92413287 + MIR SINE MIR 94 229 -33 396 250 83 0 chr10 47904619 47904751 -92412014 - MIR SINE MIR -55 207 65 249 357 0 10 chr10 47904769 47904867 -92411898 - MIR SINE MIR -121 141 45 403 234 69 17 chr10 47905131 47905306 -92411459 + L1ME3A LINE L1 5338 5521 -663 2030 174 38 8 chr10 47905322 47905714 -92411051 + MER47B DNA MER2_type 14 417 -1 447 310 120 62 chr10 47905716 47906100 -92410665 + L1ME3A LINE L1 5524 5929 -241 528 302 148 0 chr10 47908045 47908247 -92408518 + MIR SINE MIR 10 241 -21 344 242 165 33 chr10 47908901 47909083 -92407682 + MIR SINE MIR 46 251 -11 489 295 20 0 chr10 47910163 47910312 -92406453 - MIR SINE MIR -91 171 20 30 27 0 0 chr10 47911610 47911647 -92405118 + GC_rich Low_complexity Low_complexity 1 37 0 231 305 9 38 chr10 47915624 47915729 -92401036 + G-rich Low_complexity Low_complexity 3 104 0 241 190 190 25 chr10 47919789 47919868 -92396897 - MIR SINE MIR -50 212 121 404 269 54 15 chr10 47919973 47920103 -92396662 + MIR3 SINE MIR 6 140 -68 213 289 60 12 chr10 47920332 47920415 -92396350 - MIR SINE MIR -70 192 106 519 250 94 28 chr10 47920771 47920951 -92395814 - MIR SINE MIR -50 212 21 256 170 0 0 chr10 47921805 47921852 -92394913 + L2 LINE L2 3226 3272 0 394 130 40 10 chr10 47923404 47923504 -92393261 + GA-rich Low_complexity Low_complexity 3 105 0 425 195 23 0 chr10 47924234 47924321 -92392444 - MIR SINE MIR -115 147 59 198 0 0 0 chr10 47924883 47924905 -92391860 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 279 333 131 31 chr10 47925033 47925612 -92391153 + L2 LINE L2 2258 2894 -420 456 215 271 6 chr10 47925623 47925800 -92390965 - MER5C DNA MER1_type 0 324 101 386 280 26 85 chr10 47925969 47926158 -92390607 + L2 LINE L2 3136 3313 0 898 97 23 17 chr10 47926170 47926346 -92390419 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 308 94 19 0 chr10 47926398 47926451 -92390314 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 401 295 29 7 chr10 47927477 47927616 -92389149 - MIR SINE MIR -31 231 90 595 296 56 47 chr10 47928452 47928790 -92387975 - L1ME3A LINE L1 -286 5884 5544 306 305 111 32 chr10 47930380 47930659 -92386106 + L2 LINE L2 2937 3237 -76 1225 305 226 30 chr10 47931300 47932620 -92384145 - L2 LINE L2 -667 2647 1069 1591 181 43 15 chr10 47932646 47932992 -92383773 - MLT1B LTR MaLR -6 368 3 649 310 83 54 chr10 47932993 47933736 -92383029 - L2 LINE L2 -2303 1011 247 220 248 110 97 chr10 47934617 47934762 -92382003 - MER5A DNA MER1_type -24 165 19 230 0 33 0 chr10 47936158 47936188 -92380577 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 4222 153 42 12 chr10 47936319 47937091 -92379674 - L1MD1 LINE L1 0 6636 5842 2013 216 25 8 chr10 47937092 47937565 -92379200 + L1M4 LINE L1 3849 4329 -1817 * 6458 197 83 77 chr10 47937564 47938153 -92378612 - L1MD1 LINE L1 -2094 4446 3862 918 62 78 8 chr10 47938153 47938282 -92378483 - MER85 DNA T2_type -1 138 1 6458 197 83 77 chr10 47938282 47938822 -92377943 - L1MD1 LINE L1 -2678 3862 3327 1898 147 54 35 chr10 47938822 47939190 -92377575 + THE1C LTR MaLR 1 375 0 6458 197 83 77 chr10 47939190 47940410 -92376355 - L1MD1 LINE L1 -3213 3327 2116 1976 104 3 31 chr10 47940410 47940727 -92376038 + AluSg1 SINE Alu 1 308 -1 6458 197 83 77 chr10 47940727 47940997 -92375768 - L1MD1 LINE L1 -4424 2116 1849 261 0 0 0 chr10 47940997 47941026 -92375739 + (CA)n Simple_repeat Simple_repeat 2 30 0 6458 197 83 77 chr10 47941026 47941615 -92375150 - L1MD1 LINE L1 -4691 1849 1265 709 125 0 39 chr10 47941615 47941743 -92375022 - AluSg/x SINE Alu -1 311 189 6458 197 83 77 chr10 47941743 47942297 -92374468 - L1MD1 LINE L1 -5275 1265 716 207 0 0 0 chr10 47942297 47942320 -92374445 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6458 197 83 77 chr10 47942320 47942411 -92374354 - L1MD1 LINE L1 -5824 716 627 1451 148 194 12 chr10 47942411 47942741 -92374024 - MLT1B LTR MaLR 0 390 1 6458 197 83 77 chr10 47942741 47942909 -92373856 - L1MD1 LINE L1 -5913 627 14 327 261 246 14 chr10 47944545 47944687 -92372078 + MIR SINE MIR 86 260 -2 827 246 57 46 chr10 47946397 47946677 -92370088 - MLT1J LTR MaLR -226 285 3 630 0 0 0 chr10 47949197 47949267 -92367498 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 288 0 0 0 chr10 47950183 47950215 -92366550 + (CA)n Simple_repeat Simple_repeat 2 33 0 271 261 190 10 chr10 47950715 47950827 -92365938 + MIR SINE MIR 14 143 -70 252 0 0 0 chr10 47951323 47951351 -92365414 + (T)n Simple_repeat Simple_repeat 1 28 0 223 285 139 94 chr10 47951665 47952068 -92364697 - L2 LINE L2 -2 3270 2850 658 295 102 49 chr10 47953816 47954604 -92362161 + L2 LINE L2 2377 3285 -28 196 311 60 55 chr10 47956996 47957179 -92359586 + MIR SINE MIR 63 246 -16 243 0 0 0 chr10 47957740 47957767 -92358998 + (T)n Simple_repeat Simple_repeat 1 27 0 437 355 65 52 chr10 47957775 47958158 -92358607 - L2 LINE L2 -33 3239 2852 579 232 83 11 chr10 47958372 47958553 -92358212 + HAL1 LINE L1 16 209 -2298 1183 175 67 111 chr10 47958557 47958899 -92357866 - MLT1A1 LTR MaLR -38 327 1 2744 257 147 82 chr10 47958899 47959556 -92357209 + HAL1 LINE L1 347 960 -1547 2028 101 0 67 chr10 47959556 47959690 -92357075 + AluSx SINE Alu 1 142 -170 2141 108 0 7 chr10 47959690 47959996 -92356769 + AluSp SINE Alu 1 304 -9 2028 101 0 67 chr10 47959996 47960189 -92356576 + AluSx SINE Alu 142 306 -6 2744 257 147 82 chr10 47960189 47961037 -92355728 + HAL1 LINE L1 960 1752 -755 1978 127 0 0 chr10 47961037 47961344 -92355421 + AluSx SINE Alu 1 307 0 2744 257 147 82 chr10 47961344 47961616 -92355149 + HAL1 LINE L1 1752 2005 -502 2231 87 0 7 chr10 47961616 47961914 -92354851 + AluY SINE Alu 1 296 -15 2744 257 147 82 chr10 47961914 47962060 -92354705 + HAL1 LINE L1 2005 2398 -109 487 315 16 54 chr10 47962441 47962625 -92354140 + L2 LINE L2 3096 3272 0 185 295 8 107 chr10 47964332 47964410 -92352355 + MIR SINE MIR 55 118 -144 1651 185 16 7 chr10 47964410 47964713 -92352052 + AluJb SINE Alu 1 306 -6 185 295 8 107 chr10 47964713 47964756 -92352009 + MIR SINE MIR 118 164 -98 504 86 0 0 chr10 47967686 47967756 -92349009 + (CCCCAG)n Simple_repeat Simple_repeat 4 73 0 585 239 37 45 chr10 47969710 47969933 -92346832 + MIR3 SINE MIR 3 221 -41 267 139 0 0 chr10 47970156 47970199 -92346566 + L1MEd LINE L1 1157 1199 -4920 228 188 0 0 chr10 47970489 47970553 -92346212 + GA-rich Low_complexity Low_complexity 1 64 0 297 311 70 60 chr10 47971056 47971358 -92345407 + L1MEd LINE L1 249 553 -5566 8672 165 14 10 chr10 47971390 47973950 -92342815 - L1PB3 LINE L1 -2 6152 3579 14046 159 23 11 chr10 47974086 47977870 -92338895 + L1MA4A LINE L1 2468 6297 -6 979 265 146 24 chr10 47977864 47978452 -92338313 + L1M4 LINE L1 3950 4609 -1537 * 387 291 60 85 chr10 47978852 47979601 -92337164 + L1MEd LINE L1 521 1250 -4869 760 293 87 10 chr10 47980308 47980608 -92336157 - MLT1J2 LTR MaLR -18 432 110 211 306 112 22 chr10 47980786 47980920 -92335845 + MIR SINE MIR 84 229 -33 258 326 10 10 chr10 47981506 47981604 -92335161 - MIR SINE MIR -109 153 56 384 309 69 111 chr10 47981614 47981976 -92334789 - L2 LINE L2 -2 3270 2924 286 305 137 40 chr10 47982005 47982381 -92334384 - L2 LINE L2 -459 2855 2357 313 229 14 0 chr10 47982423 47982493 -92334272 + Tigger5 DNA MER2_type 2253 2323 0 257 116 0 23 chr10 47982494 47982537 -92334228 + Tigger5 DNA MER2_type 14 55 -2268 363 200 0 0 chr10 47982558 47982618 -92334147 + Tigger5 DNA MER2_type 2264 2323 0 295 344 117 0 chr10 47982620 47982783 -92333982 - L2 LINE L2 -973 2341 2160 339 200 14 14 chr10 47982860 47982930 -92333835 - L2 LINE L2 -211 3061 2992 1166 207 38 84 chr10 47983004 47983396 -92333369 - MLT1A2 LTR MaLR 0 374 1 667 196 65 6 chr10 47983555 47983723 -92333042 - L1MB4 LINE L1 -11 6667 6490 2413 76 239 137 chr10 47983723 47984250 -92332515 - LTR12 LTR ERV1 -133 581 1 5565 188 57 22 chr10 47984289 47985022 -92331743 - L1MB4 LINE L1 -293 6385 5679 1601 144 0 72 chr10 47985022 47985341 -92331424 + AluJb SINE Alu 2 297 -15 5565 188 57 22 chr10 47985341 47986384 -92330381 - L1MB4 LINE L1 -999 5679 4550 642 174 33 16 chr10 47986384 47986505 -92330260 + MLT2C2 LTR ERVL 159 281 -183 182 36 0 36 chr10 47986524 47986552 -92330213 + (TC)n Simple_repeat Simple_repeat 1 27 0 255 61 0 0 chr10 47986554 47986587 -92330178 + (CA)n Simple_repeat Simple_repeat 2 34 0 1925 164 37 8 chr10 47986587 47986941 -92329824 + MER47A DNA MER2_type 3 366 0 197 105 0 26 chr10 47986944 47986982 -92329783 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 293 167 0 0 chr10 47987003 47987051 -92329714 + MLT2C2 LTR ERVL 417 464 0 2273 163 36 0 chr10 47987063 47987481 -92329284 - L1MB4 LINE L1 -4782 1864 1432 4178 113 67 20 chr10 47987485 47988345 -92328420 + MER11A LTR ERVK 1 892 -344 550 282 57 53 chr10 47988375 47988637 -92328128 - L1MB4 LINE L1 -6275 267 5 541 313 47 43 chr10 47988874 47989130 -92327635 + MIR SINE MIR 6 262 0 1454 260 100 50 chr10 47989469 47990538 -92326227 + L2 LINE L2 2200 3312 -1 432 318 63 39 chr10 47990811 47991191 -92325574 + L1ME1 LINE L1 5508 5828 -338 266 215 101 0 chr10 47994350 47994429 -92322336 - L1ME4a LINE L1 -31 6090 6004 897 286 73 17 chr10 47994493 47994906 -92321859 - L1ME4a LINE L1 -210 5911 5476 341 62 0 0 chr10 47997593 47997641 -92319124 - L1PA16 LINE L1 -7 6159 6112 1234 145 0 71 chr10 47998342 47998653 -92318112 + AluJo SINE Alu 1 289 -23 443 195 23 0 chr10 47999432 47999519 -92317246 - MIR SINE MIR -115 147 59 180 0 0 0 chr10 48000089 48000109 -92316656 + (A)n Simple_repeat Simple_repeat 1 20 0 1856 104 0 64 chr10 48000415 48000712 -92316053 - AluSx SINE Alu -32 280 3 1409 141 86 24 chr10 48000713 48000968 -92315797 + MER4E LTR ERV1 509 779 0 2697 125 8 58 chr10 48000969 48001465 -92315300 + MER4E-int LTR ERV1 2 472 -6286 242 307 0 13 chr10 48001842 48001917 -92314848 + CT-rich Low_complexity Low_complexity 2 75 0 739 291 90 10 chr10 48002191 48002490 -92314275 - MLT1J2 LTR MaLR -18 432 110 211 306 112 22 chr10 48002666 48002800 -92313965 + MIR SINE MIR 84 229 -33 258 326 10 10 chr10 48003386 48003484 -92313281 - MIR SINE MIR -109 153 56 384 309 69 111 chr10 48003494 48003856 -92312909 - L2 LINE L2 -2 3270 2924 286 305 137 40 chr10 48003885 48004261 -92312504 - L2 LINE L2 -459 2855 2357 313 229 14 0 chr10 48004303 48004373 -92312392 + Tigger5 DNA MER2_type 2253 2323 0 257 116 0 23 chr10 48004374 48004417 -92312348 + Tigger5 DNA MER2_type 14 55 -2268 375 183 0 0 chr10 48004438 48004498 -92312267 + Tigger5 DNA MER2_type 2264 2323 0 295 344 117 0 chr10 48004500 48004663 -92312102 - L2 LINE L2 -973 2341 2160 339 200 14 14 chr10 48004740 48004810 -92311955 - L2 LINE L2 -211 3061 2992 1113 208 44 85 chr10 48004884 48005274 -92311491 - MLT1A2 LTR MaLR 0 374 1 667 196 65 6 chr10 48005433 48005601 -92311164 - L1MB4 LINE L1 -11 6667 6490 2669 82 166 129 chr10 48005601 48006161 -92310604 - LTR12 LTR ERV1 -133 581 1 5482 188 59 22 chr10 48006200 48006933 -92309832 - L1MB4 LINE L1 -293 6385 5681 1601 144 0 72 chr10 48006933 48007252 -92309513 + AluJb SINE Alu 2 297 -15 5482 188 59 22 chr10 48007252 48008291 -92308474 - L1MB4 LINE L1 -997 5681 4550 642 174 33 16 chr10 48008291 48008412 -92308353 + MLT2C2 LTR ERVL 159 281 -183 182 36 0 36 chr10 48008431 48008459 -92308306 + (TC)n Simple_repeat Simple_repeat 1 27 0 255 61 0 0 chr10 48008461 48008494 -92308271 + (CA)n Simple_repeat Simple_repeat 2 34 0 1925 164 37 8 chr10 48008494 48008848 -92307917 + MER47A DNA MER2_type 3 366 0 197 105 0 26 chr10 48008851 48008889 -92307876 + (TATATG)n Simple_repeat Simple_repeat 5 41 0 293 167 0 0 chr10 48008910 48008958 -92307807 + MLT2C2 LTR ERVL 417 464 0 2273 163 36 0 chr10 48008970 48009388 -92307377 - L1MB4 LINE L1 -4782 1864 1432 4146 114 67 20 chr10 48009392 48010252 -92306513 + MER11A LTR ERVK 1 892 -344 550 282 57 53 chr10 48010282 48010544 -92306221 - L1MB4 LINE L1 -6275 267 5 540 313 47 43 chr10 48010781 48011037 -92305728 + MIR SINE MIR 6 262 0 1412 262 97 51 chr10 48011376 48012445 -92304320 + L2 LINE L2 2200 3312 -1 432 317 64 40 chr10 48012718 48013088 -92303677 + L1ME1 LINE L1 5508 5828 -338 240 228 101 0 chr10 48016258 48016337 -92300428 - L1ME4a LINE L1 -31 6090 6004 897 286 73 17 chr10 48016401 48016814 -92299951 - L1ME4a LINE L1 -210 5911 5476 341 62 0 0 chr10 48019501 48019549 -92297216 - L1PA16 LINE L1 -7 6159 6112 1838 151 0 3 chr10 48020250 48020548 -92296217 + AluJb SINE Alu 1 297 -15 1878 121 28 7 chr10 48020898 48021188 -92295577 - AluSx SINE Alu -16 296 1 1685 179 10 0 chr10 48021349 48021646 -92295119 + AluJo SINE Alu 1 300 -12 317 266 133 7 chr10 48022264 48022407 -92294358 - Charlie8 DNA MER1_type -2160 257 97 1999 123 13 7 chr10 48022531 48022839 -92293926 - AluJo SINE Alu 0 312 3 185 324 86 9 chr10 48023534 48023639 -92293126 + MER5A DNA MER1_type 55 167 -22 * 286 282 45 3 chr10 48023548 48023645 -92293120 - MER5A DNA MER1_type -63 126 15 195 42 0 0 chr10 48024350 48024374 -92292391 + (TA)n Simple_repeat Simple_repeat 2 25 0 304 315 55 6 chr10 48024907 48025072 -92291693 + L2 LINE L2 2888 3060 -212 2092 112 17 0 chr10 48025268 48025562 -92291203 + AluSx SINE Alu 1 299 -13 327 49 0 0 chr10 48025562 48025603 -92291162 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 1663 188 95 87 chr10 48025627 48026143 -92290622 + MLT2B1 LTR ERVL 1 520 0 423 242 86 54 chr10 48026145 48026331 -92290434 - MLT1J LTR MaLR -110 401 210 1028 290 106 22 chr10 48027083 48027803 -92288962 + L1MC4a LINE L1 4531 4782 -1364 2094 129 0 10 chr10 48027803 48028112 -92288653 + AluSx SINE Alu 1 306 -6 1028 290 106 22 chr10 48028112 48028606 -92288159 + L1MC4a LINE L1 4782 5233 -913 4166 167 64 18 chr10 48028843 48030099 -92286666 + L1MB8 LINE L1 4873 6178 0 312 300 21 36 chr10 48030514 48030654 -92286111 - MIR SINE MIR -76 186 49 1939 236 70 36 chr10 48031546 48032076 -92284689 - MLT1K LTR MaLR -37 551 4 182 441 11 0 chr10 48032254 48032442 -92284323 + L2 LINE L2 2544 2733 -581 513 317 34 90 chr10 48032521 48032966 -92283799 + LTR67 LTR ERVL 138 557 0 594 39 0 0 chr10 48033292 48033369 -92283396 + (TG)n Simple_repeat Simple_repeat 2 78 0 364 242 11 11 chr10 48034456 48034547 -92282218 - MIR SINE MIR -81 127 37 566 277 79 5 chr10 48035091 48035293 -92281472 + MIR SINE MIR 35 251 -11 188 372 12 0 chr10 48035707 48035793 -92280972 - MIR SINE MIR -17 245 159 523 297 136 30 chr10 48035809 48036045 -92280720 + MIR SINE MIR 2 262 0 2093 135 0 0 chr10 48036266 48036578 -92280187 + AluSx SINE Alu 1 312 0 366 42 0 0 chr10 48036579 48036627 -92280138 + (TA)n Simple_repeat Simple_repeat 2 49 0 345 245 146 14 chr10 48036661 48036780 -92279985 - MIR SINE MIR -84 124 2 364 285 24 60 chr10 48037592 48037890 -92278875 + L1MEd LINE L1 923 1209 -4910 1969 120 10 0 chr10 48038002 48038301 -92278464 + AluSx SINE Alu 1 302 -10 43866 44 6 0 chr10 48038301 48044419 -92272346 + L1PA4 LINE L1 15 6167 0 321 293 76 19 chr10 48044420 48044667 -92272098 + L1MEd LINE L1 1324 1615 -875 1711 196 143 39 chr10 48044682 48045172 -92271593 - MER74A LTR ERVL -12 546 6 1363 178 4 12 chr10 48045172 48045425 -92271340 + AluJo SINE Alu 48 298 -14 1367 162 59 53 chr10 48045556 48045859 -92270906 + AluJo SINE Alu 1 305 -7 242 295 40 35 chr10 48046073 48046099 -92270666 + L1M4 LINE L1 5133 5157 -989 2059 113 23 0 chr10 48046099 48046401 -92270364 + AluSg SINE Alu 1 309 -1 242 295 40 35 chr10 48046401 48046547 -92270218 + L1M4 LINE L1 5157 5306 -840 1601 137 0 0 chr10 48046713 48046947 -92269818 - AluSx SINE Alu -78 234 1 24 32 0 0 chr10 48046957 48046988 -92269777 + AT_rich Low_complexity Low_complexity 1 31 0 371 195 12 12 chr10 48047656 48047738 -92269027 + L1MD1 LINE L1 5848 5929 -313 951 166 0 0 chr10 48047738 48047889 -92268876 - FRAM SINE Alu -18 158 8 693 231 77 74 chr10 48047900 48048071 -92268694 + L1MD1 LINE L1 5922 6096 -146 1799 118 10 36 chr10 48048071 48048211 -92268554 + AluSx SINE Alu 1 143 -169 1724 171 3 0 chr10 48048211 48048510 -92268255 + AluSq SINE Alu 1 300 -13 1799 118 10 36 chr10 48048510 48048673 -92268092 + AluSx SINE Alu 143 296 -16 693 231 77 74 chr10 48048673 48048813 -92267952 + L1MD1 LINE L1 6096 6234 -8 1372 233 48 18 chr10 48048861 48049110 -92267655 + MER58B DNA MER1_type 2 265 -2155 2131 165 22 3 chr10 48049110 48049468 -92267297 + MLT1A1 LTR MaLR 1 365 0 1372 233 48 18 chr10 48049468 48049548 -92267217 + MER58B DNA MER1_type 265 341 0 282 242 169 45 chr10 48049549 48049727 -92267038 - L1ME LINE L1 -367 5754 5555 498 239 14 29 chr10 48049734 48049872 -92266893 + L1ME LINE L1 10 145 -5925 4084 224 85 73 chr10 48049891 48050225 -92266540 + L1M4 LINE L1 3073 3402 -2744 2086 164 50 16 chr10 48050225 48050602 -92266163 - MLT1B LTR MaLR 0 390 1 4084 224 85 73 chr10 48050602 48052194 -92264571 + L1M4 LINE L1 3402 5026 -1120 2286 70 3 20 chr10 48052194 48052496 -92264269 + AluY SINE Alu 1 297 -14 4084 224 85 73 chr10 48052496 48052576 -92264189 + L1M4 LINE L1 5026 5104 -1042 735 196 28 7 chr10 48052580 48052723 -92264042 + MLT1A1 LTR MaLR 5 150 -215 6369 116 19 24 chr10 48052730 48052922 -92263843 + L1PB1 LINE L1 4616 4808 -1343 2096 128 0 0 chr10 48052922 48053228 -92263537 + AluSx SINE Alu 7 312 0 6369 116 19 24 chr10 48053228 48054217 -92262548 + L1PB1 LINE L1 4808 5801 -350 288 0 0 0 chr10 48054217 48054249 -92262516 + (CA)n Simple_repeat Simple_repeat 2 33 0 6369 116 19 24 chr10 48054249 48054433 -92262332 + L1PB1 LINE L1 5801 5967 -184 1868 143 34 0 chr10 48054433 48054726 -92262039 + AluSx SINE Alu 3 305 -7 6369 116 19 24 chr10 48054726 48054909 -92261856 + L1PB1 LINE L1 5967 6150 -1 965 192 79 23 chr10 48054928 48055142 -92261623 + MLT1A1 LTR MaLR 140 365 0 663 157 119 0 chr10 48055149 48055308 -92261457 + L1M4 LINE L1 5128 5305 -841 709 150 98 31 chr10 48055312 48055505 -92261260 - L1MD1 LINE L1 0 6242 6037 258 293 44 44 chr10 48055507 48055712 -92261053 - L1MEd LINE L1 -4974 1145 941 2201 85 0 10 chr10 48055865 48056171 -92260594 - AluY SINE Alu -7 304 2 764 191 0 15 chr10 48056267 48056398 -92260367 - FLAM_A SINE Alu -4 129 1 355 346 69 27 chr10 48056679 48056867 -92259898 + MIR SINE MIR 67 262 0 1195 103 12 0 chr10 48056938 48057103 -92259662 - AluSg/x SINE Alu -17 293 127 2084 91 7 7 chr10 48057586 48057871 -92258894 + AluSq SINE Alu 6 290 -23 187 330 24 13 chr10 48059063 48059161 -92257604 - MIR SINE MIR -19 189 87 330 346 84 0 chr10 48061892 48062071 -92254694 - MIR SINE MIR 0 262 69 644 212 139 18 chr10 48062598 48062797 -92253968 + MIR SINE MIR 21 243 -19 287 212 66 95 chr10 48064856 48064993 -92251772 + L3 LINE CR1 765 897 -680 201 83 0 62 chr10 48065255 48065303 -92251462 + (GGGGA)n Simple_repeat Simple_repeat 2 46 0 315 255 47 38 chr10 48065506 48065612 -92251153 + MER5A DNA MER1_type 9 115 -74 413 290 25 62 chr10 48065632 48065794 -92250971 - L2 LINE L2 -168 3104 2949 388 321 83 5 chr10 48066862 48067055 -92249710 - MIR SINE MIR -15 247 40 23 0 0 0 chr10 48067231 48067254 -92249511 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 48067266 48067299 -92249466 + AT_rich Low_complexity Low_complexity 1 33 0 2964 169 36 61 chr10 48068103 48068209 -92248556 + L1MB7 LINE L1 4900 5007 -1177 1249 226 24 3 chr10 48068209 48068497 -92248268 + AluJb SINE Alu 5 298 -14 2964 169 36 61 chr10 48068497 48068709 -92248056 + L1MB7 LINE L1 5007 5223 -961 1653 173 0 40 chr10 48068709 48068775 -92247990 + AluJo SINE Alu 1 68 -244 2216 84 3 10 chr10 48068775 48069083 -92247682 + AluSp SINE Alu 1 306 -7 1653 173 0 40 chr10 48069083 48069363 -92247402 + AluJo SINE Alu 68 312 0 2964 169 36 61 chr10 48069363 48069527 -92247238 + L1MB7 LINE L1 5223 5390 -794 1229 166 21 98 chr10 48069527 48069865 -92246900 + AluYb8 SINE Alu 1 312 -6 2964 169 36 61 chr10 48069865 48070165 -92246600 + L1MB7 LINE L1 5390 5696 -488 2100 112 0 3 chr10 48070165 48070461 -92246304 + AluSx SINE Alu 1 295 -17 2148 92 0 0 chr10 48070463 48070774 -92245991 + AluY SINE Alu 1 311 0 2964 169 36 61 chr10 48070774 48071013 -92245752 + L1MB7 LINE L1 5697 5902 -282 1842 138 29 23 chr10 48071013 48071534 -92245231 + MER4A LTR ERV1 1 664 0 814 224 94 1 chr10 48071537 48071780 -92244985 + L1MB7 LINE L1 5899 6183 -1 225 196 0 0 chr10 48071782 48071833 -92244932 + CT-rich Low_complexity Low_complexity 3 53 0 293 224 3 58 chr10 48072114 48072230 -92244535 - L1ME3A LINE L1 -196 5968 5856 619 70 23 12 chr10 48072239 48072325 -92244440 - MER4E LTR ERV1 -2 764 678 7500 120 24 31 chr10 48072325 48072517 -92244248 - MER4B-int LTR ERV1 -2934 3824 3632 2039 134 0 0 chr10 48072517 48072823 -92243942 + AluSx SINE Alu 1 306 -6 7500 120 24 31 chr10 48072823 48072843 -92243922 - MER4B-int LTR ERV1 -3126 3632 3613 1861 151 146 13 chr10 48072843 48073221 -92243544 + MSTA LTR MaLR 1 428 0 7500 120 24 31 chr10 48073221 48074222 -92242543 - MER4B-int LTR ERV1 -3145 3613 2619 1292 133 195 4 chr10 48074229 48074351 -92242414 - AluSg1 SINE Alu -4 305 208 2157 93 10 7 chr10 48074351 48074661 -92242104 - AluSx SINE Alu 0 312 2 1292 133 195 4 chr10 48074661 48074794 -92241971 - AluSg1 SINE Alu -101 208 1 2768 124 48 57 chr10 48074794 48075165 -92241600 - MER4B-int LTR ERV1 -4800 1958 1585 1782 147 3 38 chr10 48075165 48075479 -92241286 + AluSx SINE Alu 1 303 -9 2768 124 48 57 chr10 48075479 48075908 -92240857 - MER4B-int LTR ERV1 -5173 1585 786 1339 129 4 57 chr10 48075997 48076260 -92240505 + AluJb SINE Alu 61 309 -3 6276 134 13 59 chr10 48076264 48076525 -92240240 - MER4B-int LTR ERV1 -5682 1076 805 1859 143 19 3 chr10 48076525 48076832 -92239933 - AluJb SINE Alu 0 312 1 6276 134 13 59 chr10 48076832 48077696 -92239069 - MER4B-int LTR ERV1 -5953 805 2 2672 134 99 39 chr10 48077697 48077953 -92238812 - MER4B LTR ERV1 0 779 540 1891 103 0 63 chr10 48077953 48078282 -92238483 + AluSx SINE Alu 3 312 0 2672 134 99 39 chr10 48078282 48078501 -92238264 - MER4B LTR ERV1 -239 540 336 1583 184 13 7 chr10 48078501 48078805 -92237960 - AluJb SINE Alu -4 308 3 2672 134 99 39 chr10 48078805 48078902 -92237863 - MER4B LTR ERV1 -443 336 3 1666 213 38 38 chr10 48078904 48078937 -92237828 + L1ME1 LINE L1 4818 4850 -1296 2300 70 3 3 chr10 48078937 48079238 -92237527 - AluY SINE Alu -9 302 2 1666 213 38 38 chr10 48079238 48079684 -92237081 + L1ME1 LINE L1 4849 5297 -849 1665 176 0 0 chr10 48079716 48080020 -92236745 + AluJb SINE Alu 1 304 0 2152 212 65 40 chr10 48080027 48080597 -92236168 + L1ME1 LINE L1 5469 6052 -114 2129 97 27 3 chr10 48080964 48081264 -92235501 - AluSg SINE Alu -3 307 1 351 295 57 86 chr10 48081289 48081499 -92235266 - L1MC4 LINE L1 -19 8023 7820 1518 193 71 51 chr10 48081522 48081974 -92234791 - L1ME2 LINE L1 -2 6162 5702 376 228 65 0 chr10 48081966 48082058 -92234707 - L1ME2 LINE L1 -2120 4026 3929 * 990 194 22 78 chr10 48082225 48082493 -92234272 - L1MB8 LINE L1 -41 6137 5885 1096 136 6 0 chr10 48082493 48082669 -92234096 - AluJb SINE Alu -17 295 119 3133 182 30 3 chr10 48082675 48083484 -92233281 - L1MB8 LINE L1 -311 5867 5039 3141 138 5 30 chr10 48083525 48084084 -92232681 - L1MB3 LINE L1 -19 6164 5620 1970 124 50 0 chr10 48084107 48084389 -92232376 + AluSp SINE Alu 1 296 -17 1198 217 134 38 chr10 48084421 48084744 -92232021 - L1MB3 LINE L1 -1073 5073 4700 2387 107 3 0 chr10 48084744 48085053 -92231712 - AluSx SINE Alu -2 310 1 1198 217 134 38 chr10 48085053 48085148 -92231617 - L1MB3 LINE L1 -1446 4700 4615 1669 101 60 12 chr10 48085159 48085407 -92231358 + AluSx SINE Alu 21 280 -32 275 178 0 0 chr10 48085631 48085676 -92231089 - AluSq SINE Alu -20 282 238 513 220 38 0 chr10 48085840 48085972 -92230793 + L1MC2 LINE L1 4564 4700 -1446 1757 114 4 0 chr10 48085985 48086221 -92230544 - AluSq SINE Alu -76 237 1 587 241 24 42 chr10 48086250 48086462 -92230303 + L1MC2 LINE L1 4924 5131 -1015 1272 138 0 0 chr10 48086484 48086658 -92230107 + AluJb SINE Alu 2 175 -137 1893 162 10 3 chr10 48086673 48086981 -92229784 + AluSx SINE Alu 1 310 -2 3798 158 42 35 chr10 48086985 48087055 -92229710 + L1MC2 LINE L1 5258 5326 -1018 2326 118 0 0 chr10 48087055 48087351 -92229414 + AluSg SINE Alu 1 296 -14 3798 158 42 35 chr10 48087351 48088115 -92228650 + L1MC2 LINE L1 5326 6098 -246 2155 85 20 30 chr10 48088504 48088809 -92227956 - AluSx SINE Alu -10 302 1 418 234 32 90 chr10 48092283 48092364 -92224401 + MER104 DNA MER2_type 4 88 -1810 2465 99 3 0 chr10 48092364 48092676 -92224089 + AluSq SINE Alu 1 313 0 418 234 32 90 chr10 48092676 48092782 -92223983 + MER104 DNA MER2_type 88 180 0 273 301 63 21 chr10 48092786 48092929 -92223836 - L2 LINE L2 -24 3289 3141 407 236 132 16 chr10 48092976 48093158 -92223607 - L1MC5 LINE L1 -53 7908 7706 1244 221 32 26 chr10 48093200 48093508 -92223257 + L1MC1 LINE L1 18 327 -6213 386 183 12 0 chr10 48093537 48093619 -92223146 + L1MC1 LINE L1 1928 2010 -4530 180 0 0 0 chr10 48093619 48093639 -92223126 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 5122 202 70 56 chr10 48094192 48094737 -92222028 + L1MC1 LINE L1 1994 2530 -4197 2024 138 14 0 chr10 48094737 48095026 -92221739 + AluSc SINE Alu 1 293 -16 5122 202 70 56 chr10 48095026 48096037 -92220728 + L1MC1 LINE L1 2530 3525 -3202 1824 176 3 13 chr10 48096037 48096344 -92220421 - AluSx SINE Alu -8 304 1 5122 202 70 56 chr10 48096344 48097339 -92219426 + L1MC1 LINE L1 3525 4505 -2222 2680 62 0 0 chr10 48097339 48097648 -92219117 + AluY SINE Alu 1 309 -2 5122 202 70 56 chr10 48097648 48098106 -92218659 + L1MC1 LINE L1 4505 4955 -1772 2367 103 3 0 chr10 48098106 48098408 -92218357 + AluSp SINE Alu 1 303 -10 5122 202 70 56 chr10 48098408 48098950 -92217815 + L1MC1 LINE L1 4955 6727 0 3403 247 56 24 chr10 48098951 48100238 -92216527 + L1M4 LINE L1 2111 3438 -2708 2552 113 13 42 chr10 48100244 48100401 -92216364 - L1MC1 LINE L1 -298 6035 5875 2280 121 3 0 chr10 48100401 48100707 -92216058 - AluSx SINE Alu -5 307 1 2552 113 13 42 chr10 48100707 48101007 -92215758 - L1MC1 LINE L1 -458 5875 5591 1575 237 93 30 chr10 48101014 48101354 -92215411 + L1M4 LINE L1 3452 3846 -2300 1334 183 99 35 chr10 48101354 48101638 -92215127 - AluJo SINE Alu -10 302 1 1575 237 93 30 chr10 48101638 48101887 -92214878 + L1M4 LINE L1 3846 4078 -2068 296 288 0 71 chr10 48102007 48102191 -92214574 + G-rich Low_complexity Low_complexity 2 172 0 600 116 58 23 chr10 48102371 48103267 -92213498 + (CA)n Simple_repeat Simple_repeat 1 927 0 226 109 87 0 chr10 48103291 48103383 -92213382 + (CA)n Simple_repeat Simple_repeat 1 100 0 185 317 117 49 chr10 48105871 48106076 -92210689 + L2 LINE L2 3014 3232 -40 351 289 80 35 chr10 48107016 48107211 -92209554 + MIR SINE MIR 28 224 -38 504 303 63 19 chr10 48108599 48108870 -92207895 + L1MC4a LINE L1 5260 5542 -2266 201 255 0 0 chr10 48109436 48109483 -92207282 - MIR SINE MIR -113 149 103 405 0 0 0 chr10 48109546 48109591 -92207174 + (CA)n Simple_repeat Simple_repeat 1 45 0 2341 102 0 3 chr10 48109731 48110034 -92206731 + AluSp SINE Alu 1 302 -11 335 299 52 0 chr10 48110239 48110336 -92206429 + MIR3 SINE MIR 82 183 -25 209 229 42 0 chr10 48111797 48111845 -92204920 + G-rich Low_complexity Low_complexity 1 50 0 548 303 117 22 chr10 48113775 48114237 -92202528 + L1MC4a LINE L1 5673 6178 -1630 2265 125 3 0 chr10 48114415 48114718 -92202047 + AluSx SINE Alu 1 304 -8 263 185 0 19 chr10 48114901 48114955 -92201810 + L1MC4 LINE L1 6703 6755 -1287 * 2423 241 83 37 chr10 48114946 48115770 -92200995 + L1MC5 LINE L1 6743 7616 -345 2127 135 3 0 chr10 48115770 48116067 -92200698 + AluSx SINE Alu 1 298 -14 2423 241 83 37 chr10 48116067 48116299 -92200466 + L1MC5 LINE L1 7616 7836 -125 201 255 39 0 chr10 48117165 48117216 -92199549 - L2 LINE L2 -3 3269 3217 206 248 159 18 chr10 48117397 48117510 -92199255 - L2 LINE L2 -173 3140 3012 435 324 70 18 chr10 48117887 48118159 -92198606 + L1MC4a LINE L1 5678 5963 -1845 1239 306 43 3 chr10 48118201 48118593 -92198172 + L1MC4a LINE L1 5519 5926 -1882 222 204 0 0 chr10 48119058 48119110 -92197655 - MIR SINE MIR -83 125 73 205 324 14 0 chr10 48121175 48121249 -92195516 + MIR SINE MIR 24 98 -164 459 242 141 27 chr10 48121426 48121575 -92195190 - MIR SINE MIR -35 227 62 213 154 77 39 chr10 48122543 48122595 -92194170 + MIR SINE MIR 86 139 -69 25 51 0 0 chr10 48123023 48123062 -92193703 + GC_rich Low_complexity Low_complexity 1 39 0 299 268 27 45 chr10 48123402 48123514 -92193251 + MIR SINE MIR 123 232 -30 470 267 0 0 chr10 48123846 48123951 -92192814 + L2 LINE L2 2581 2685 -629 238 238 79 16 chr10 48124170 48124233 -92192532 + L2 LINE L2 3204 3270 -2 236 339 120 22 chr10 48124525 48124708 -92192057 - L2 LINE L2 -742 2572 2372 378 0 0 0 chr10 48125004 48125046 -92191719 + (TG)n Simple_repeat Simple_repeat 2 43 0 419 302 50 92 chr10 48125075 48125509 -92191256 - L1ME4a LINE L1 -34 6087 5666 2197 124 7 0 chr10 48125554 48125861 -92190904 - AluSg SINE Alu -1 309 1 290 280 114 26 chr10 48125885 48126078 -92190687 - L1ME4a LINE L1 -496 5625 5416 2234 128 0 0 chr10 48126108 48126397 -92190368 - AluSx SINE Alu -23 289 1 277 303 49 5 chr10 48126427 48126612 -92190153 - L1ME4a LINE L1 -755 5391 5199 1127 144 4 70 chr10 48126633 48126753 -92190012 + Tigger7 DNA MER2_type 2360 2458 -129 2307 125 0 3 chr10 48126753 48127066 -92189699 + AluSx SINE Alu 1 312 0 1127 144 4 70 chr10 48127066 48127188 -92189577 + Tigger7 DNA MER2_type 2458 2586 -1 4294 178 31 12 chr10 48127188 48128417 -92188348 - L1MD1 LINE L1 -168 6074 4819 617 179 43 14 chr10 48128417 48128557 -92188208 - L1MB7 LINE L1 -12 6172 6029 2248 110 7 0 chr10 48130201 48130501 -92186264 + AluSx SINE Alu 1 302 -10 893 123 15 0 chr10 48130501 48130631 -92186134 + AluSq SINE Alu 135 266 -47 319 270 8 8 chr10 48130644 48130770 -92185995 + GA-rich Low_complexity Low_complexity 3 128 0 2040 138 34 0 chr10 48131298 48131596 -92185169 - AluJb SINE Alu -4 308 1 303 284 91 30 chr10 48131625 48131889 -92184876 - L1ME4a LINE L1 0 6121 5842 2067 90 23 8 chr10 48133564 48133957 -92182808 - LTR7 LTR ERV1 -7 443 1 24 85 0 0 chr10 48134772 48134831 -92181934 + AT_rich Low_complexity Low_complexity 1 59 0 587 219 192 0 chr10 48135957 48136108 -92180657 + MER5A DNA MER1_type 10 189 0 4885 120 30 34 chr10 48136260 48137152 -92179613 + L1PA16 LINE L1 5277 6165 -1 702 209 16 0 chr10 48137182 48137311 -92179454 + FLAM_A SINE Alu 2 132 -1 598 268 80 18 chr10 48138290 48138566 -92178199 + L1ME4a LINE L1 5582 5874 -247 622 230 97 41 chr10 48138568 48138764 -92178001 - MIR SINE MIR -4 258 52 280 51 0 0 chr10 48138866 48138905 -92177860 + MADE1 DNA Mariner 1 39 -41 1767 241 90 2 chr10 48138905 48139428 -92177337 - L1ME3 LINE L1 -24 6138 5570 2384 72 3 0 chr10 48139630 48139923 -92176842 + AluSx SINE Alu 1 294 -18 1159 191 119 4 chr10 48139932 48140210 -92176555 + L1MC1 LINE L1 6019 6328 -5 379 217 19 0 chr10 48140909 48141015 -92175750 + CT-rich Low_complexity Low_complexity 1 108 0 242 359 113 38 chr10 48142418 48142577 -92174188 - L2 LINE L2 -87 3185 3015 248 231 0 0 chr10 48142587 48142639 -92174126 + LTR30 LTR ERV1 1 52 -670 2161 118 151 0 chr10 48142639 48143011 -92173754 + LTR12 LTR ERV1 53 480 -234 342 256 62 56 chr10 48143193 48143353 -92173412 + MIR3 SINE MIR 36 196 -12 1961 155 3 3 chr10 48144006 48144303 -92172462 + AluJo SINE Alu 10 306 -6 364 191 22 0 chr10 48144303 48144392 -92172373 + GA-rich Low_complexity Low_complexity 1 91 0 280 264 47 38 chr10 48144598 48144704 -92172061 + MER5A DNA MER1_type 9 115 -74 412 290 25 62 chr10 48144724 48144886 -92171879 - L2 LINE L2 -168 3104 2949 350 295 98 21 chr10 48145954 48146147 -92170618 - MIR SINE MIR -15 247 40 23 0 0 0 chr10 48146320 48146343 -92170422 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 48146355 48146388 -92170377 + AT_rich Low_complexity Low_complexity 1 33 0 2715 157 34 118 chr10 48147192 48147298 -92169467 + L1MB7 LINE L1 4900 5013 -1171 1407 212 42 3 chr10 48147298 48147581 -92169184 + AluJb SINE Alu 5 298 -14 2715 157 34 118 chr10 48147581 48147793 -92168972 + L1MB7 LINE L1 5013 5241 -943 460 152 0 0 chr10 48147793 48147859 -92168906 + AluJo SINE Alu 1 66 -246 2316 84 3 10 chr10 48147859 48148167 -92168598 + AluSp SINE Alu 1 306 -7 1463 182 0 12 chr10 48148167 48148447 -92168318 + AluJo SINE Alu 57 312 0 2715 157 34 118 chr10 48148447 48148611 -92168154 + L1MB7 LINE L1 5239 5415 -769 1877 126 0 81 chr10 48148611 48148945 -92167820 + AluSp SINE Alu 1 307 -6 2715 157 34 118 chr10 48148945 48149245 -92167520 + L1MB7 LINE L1 5415 5739 -445 2216 112 0 3 chr10 48149245 48149541 -92167224 + AluSx SINE Alu 1 295 -17 2233 96 0 0 chr10 48149543 48149854 -92166911 + AluY SINE Alu 1 311 0 2715 157 34 118 chr10 48149854 48150093 -92166672 + L1MB7 LINE L1 5740 5902 -282 1693 138 29 23 chr10 48150093 48150614 -92166151 + MER4A LTR ERV1 1 664 0 747 209 75 0 chr10 48150673 48150860 -92165905 + L1MB7 LINE L1 5983 6183 -1 225 196 0 0 chr10 48150862 48150913 -92165852 + CT-rich Low_complexity Low_complexity 3 53 0 270 204 10 68 chr10 48151207 48151310 -92165455 - L1ME3A LINE L1 -218 5952 5856 573 70 23 12 chr10 48151319 48151405 -92165360 - MER4E LTR ERV1 -2 764 678 6945 120 24 34 chr10 48151405 48151597 -92165168 - MER4B-int LTR ERV1 -2934 3824 3632 2144 132 0 0 chr10 48151597 48151900 -92164865 + AluSx SINE Alu 1 303 -9 6945 120 24 34 chr10 48151900 48151923 -92164842 - MER4B-int LTR ERV1 -3126 3632 3610 1826 151 146 13 chr10 48151923 48152301 -92164464 + MSTA LTR MaLR 1 428 0 6945 120 24 34 chr10 48152301 48153302 -92163463 - MER4B-int LTR ERV1 -3148 3610 2619 715 88 0 0 chr10 48153309 48153411 -92163354 - AluSp/q SINE Alu -4 309 208 2307 113 0 0 chr10 48153434 48153743 -92163022 - AluSx SINE Alu -3 309 1 1820 254 24 56 chr10 48153746 48154280 -92162485 + L1MC4a LINE L1 6103 6608 -1200 264 100 0 0 chr10 48154280 48154320 -92162445 + (TG)n Simple_repeat Simple_repeat 1 40 0 1820 254 24 56 chr10 48154320 48154538 -92162227 + L1MC4a LINE L1 6608 6831 -977 1411 262 146 22 chr10 48154565 48155298 -92161467 + L1MC4 LINE L1 7095 7918 -124 34 55 0 0 chr10 48155322 48155377 -92161388 + AT_rich Low_complexity Low_complexity 1 55 0 26 74 0 0 chr10 48155882 48155936 -92160829 + AT_rich Low_complexity Low_complexity 1 54 0 464 266 84 21 chr10 48156037 48156180 -92160585 + MIR3 SINE MIR 30 181 -27 676 317 74 1 chr10 48156744 48156980 -92159785 - MIR SINE MIR -17 245 2 190 322 116 34 chr10 48157197 48157430 -92159335 + L2 LINE L2 2009 2260 -1054 546 245 117 21 chr10 48157475 48157663 -92159102 + MIR SINE MIR 47 252 -10 268 294 110 18 chr10 48157713 48157822 -92158943 + MIR SINE MIR 34 152 -110 1186 121 76 18 chr10 48157963 48158186 -92158579 - MER46A DNA MER2_type 0 236 1 194 349 0 15 chr10 48158215 48158281 -92158484 - L2 LINE L2 -24 3289 3225 372 319 78 42 chr10 48158777 48159163 -92157602 + MLT1K LTR MaLR 189 588 0 1102 117 101 0 chr10 48159490 48159634 -92157131 + MER107 DNA MER1_type 1 168 -29 195 42 0 0 chr10 48159634 48159658 -92157107 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1102 117 101 0 chr10 48159658 48159692 -92157073 + MER107 DNA MER1_type 168 197 0 349 284 74 25 chr10 48159866 48160028 -92156737 + L1M4 LINE L1 2675 2844 -3302 1034 151 0 13 chr10 48160309 48160468 -92156297 + FRAM SINE Alu 1 157 -19 2208 104 3 3 chr10 48160536 48160834 -92155931 + AluSg SINE Alu 1 298 -12 638 213 74 0 chr10 48160855 48160977 -92155788 - FLAM_A SINE Alu -2 131 1 304 111 0 6 chr10 48161173 48161232 -92155533 + AluSq/x SINE Alu 84 132 -170 261 264 23 0 chr10 48161417 48161504 -92155261 - L1ME LINE L1 -264 5857 5769 380 244 111 36 chr10 48162106 48162296 -92154469 + L1ME LINE L1 5221 5425 -757 385 255 141 35 chr10 48162340 48162595 -92154170 + L1ME LINE L1 5543 5824 -297 23 68 0 0 chr10 48162804 48162848 -92153917 + AT_rich Low_complexity Low_complexity 1 44 0 288 206 55 14 chr10 48163033 48163106 -92153659 + MER21B LTR ERV1 40 115 -748 781 254 120 72 chr10 48163157 48163617 -92153148 + MER21B LTR ERV1 258 739 -124 385 260 87 16 chr10 48163912 48164039 -92152726 + L2 LINE L2 3137 3272 0 255 292 200 8 chr10 48164985 48165105 -92151660 + L3 LINE CR1 1430 1572 -5 714 163 5 7 chr10 48166201 48166404 -92150361 + AluJb SINE Alu 15 266 -46 1322 212 119 3 chr10 48167390 48167701 -92149064 + MER7A DNA MER2_type 1 345 -1 747 106 121 8 chr10 48167888 48168020 -92148745 - AluSp/q SINE Alu -6 307 161 189 0 0 0 chr10 48168980 48169001 -92147764 + (CA)n Simple_repeat Simple_repeat 2 22 0 222 231 0 19 chr10 48169357 48169409 -92147356 - L2 LINE L2 -12 3301 3251 2452 81 3 3 chr10 48169731 48170041 -92146724 + AluSp SINE Alu 1 310 -3 441 314 36 54 chr10 48170043 48170266 -92146499 + MIR SINE MIR 32 250 -12 2061 138 3 0 chr10 48170637 48170933 -92145832 + AluSx SINE Alu 1 297 -15 1784 134 22 47 chr10 48171689 48172009 -92144756 + AluJb SINE Alu 1 312 0 24 0 0 0 chr10 48172222 48172246 -92144519 + AT_rich Low_complexity Low_complexity 1 24 0 2491 92 0 3 chr10 48172552 48172866 -92143899 + AluSq SINE Alu 1 313 0 207 0 0 0 chr10 48174540 48174563 -92142202 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 718 216 122 17 chr10 48175295 48175460 -92141305 + L1ME2 LINE L1 4106 4252 -1894 1873 120 52 24 chr10 48175460 48175777 -92140988 + AluSx SINE Alu 1 312 0 718 216 122 17 chr10 48175777 48175907 -92140858 + L1ME2 LINE L1 4252 4432 -1714 2391 94 0 19 chr10 48175923 48176241 -92140524 + AluSx SINE Alu 1 312 0 676 132 0 0 chr10 48176253 48176359 -92140406 + AluSg/x SINE Alu 201 306 -3 1567 205 31 35 chr10 48176372 48176928 -92139837 + L1ME2 LINE L1 5175 5722 -442 972 220 40 87 chr10 48176931 48177197 -92139568 - MLT2C1 LTR ERVL 0 397 155 2107 142 0 0 chr10 48177197 48177493 -92139272 + AluSx SINE Alu 1 296 -16 972 220 40 87 chr10 48177493 48177630 -92139135 - MLT2C1 LTR ERVL -242 155 13 1073 272 45 31 chr10 48177652 48178075 -92138690 + L1ME2 LINE L1 5726 6154 -10 823 266 16 4 chr10 48178079 48178323 -92138442 + L1MC4a LINE L1 6345 6591 -1217 258 81 0 0 chr10 48178323 48178360 -92138405 + (TG)n Simple_repeat Simple_repeat 2 38 0 3434 203 111 52 chr10 48178375 48179558 -92137207 + L1MC4 LINE L1 6771 8023 -19 347 167 0 0 chr10 48179558 48179618 -92137147 + L1MC4 LINE L1 7968 8027 -15 2281 110 0 0 chr10 48179651 48179959 -92136806 + AluSc SINE Alu 1 308 -1 867 228 114 40 chr10 48180303 48180542 -92136223 + L1M4 LINE L1 4317 4537 -1609 2034 61 4 0 chr10 48180542 48180787 -92135978 + AluSp SINE Alu 47 292 -21 867 228 114 40 chr10 48180787 48180968 -92135797 + L1M4 LINE L1 4537 4768 -1378 360 173 232 0 chr10 48180969 48181137 -92135628 + L1M4 LINE L1 5114 5320 -826 439 151 28 19 chr10 48181148 48181254 -92135511 + L1MA10 LINE L1 6227 6333 -1 259 196 0 0 chr10 48181259 48181305 -92135460 + L2 LINE L2 3137 3182 -90 1627 189 13 17 chr10 48181313 48181615 -92135150 + AluJo SINE Alu 1 301 -11 261 274 91 62 chr10 48181813 48181999 -92134766 + MIR SINE MIR 17 206 -56 183 80 0 0 chr10 48183364 48183389 -92133376 + (A)n Simple_repeat Simple_repeat 1 25 0 2220 119 0 3 chr10 48184137 48184448 -92132317 - AluY SINE Alu -1 310 1 2406 70 7 10 chr10 48184618 48184919 -92131846 - AluY SINE Alu -11 300 1 933 153 3 2 chr10 48385262 48385884 -91930881 - ACRO1 Satellite acromeric 0 622 1 635 201 0 0 chr10 48386216 48386472 -91930293 - ACRO1 Satellite acromeric 0 256 1 383 106 15 0 chr10 48386893 48386959 -91929806 + (TG)n Simple_repeat Simple_repeat 1 67 0 245 27 54 0 chr10 48387001 48387038 -91929727 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 219 281 31 0 chr10 48387467 48387531 -91929234 + MER5A DNA MER1_type 118 183 -6 1546 226 161 7 chr10 48387783 48388244 -91928521 + MER21B LTR ERV1 199 730 -133 1663 115 70 0 chr10 48388430 48388716 -91928049 - L1PA10 LINE L1 0 6168 5863 239 273 0 0 chr10 48389102 48389157 -91927608 + Tigger5 DNA MER2_type 1 55 -2268 642 68 0 0 chr10 48389459 48389547 -91927218 + (GGAA)n Simple_repeat Simple_repeat 4 91 0 763 207 36 116 chr10 48389605 48389934 -91926831 + L1MB8 LINE L1 5840 6142 -36 1098 120 3 0 chr10 48390623 48392178 -91924587 - ACRO1 Satellite acromeric 0 1559 1 630 199 0 0 chr10 48392510 48392766 -91923999 - ACRO1 Satellite acromeric 0 256 1 416 91 15 0 chr10 48393187 48393253 -91923512 + (TG)n Simple_repeat Simple_repeat 1 67 0 426 20 0 0 chr10 48393295 48393346 -91923419 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 243 237 118 0 chr10 48393760 48393836 -91922929 + MER5A DNA MER1_type 99 183 -6 1083 169 0 0 chr10 48394128 48394833 -91921932 + ACRO1 Satellite acromeric 1 705 -55 763 207 36 116 chr10 48395523 48395852 -91920913 - L1MB8 LINE L1 -36 6142 5840 723 92 0 0 chr10 48395905 48396014 -91920751 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 237 186 0 0 chr10 48396316 48396359 -91920406 - Tigger5 DNA MER2_type -2268 55 13 1731 93 71 0 chr10 48396757 48397025 -91919740 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr10 48397025 48397054 -91919711 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 875 279 35 22 chr10 48397230 48397542 -91919223 - MER21A LTR ERV1 -132 799 484 547 132 132 0 chr10 48397525 48397616 -91919149 - MER21B LTR ERV1 -485 378 276 * 335 352 35 30 chr10 48398156 48398355 -91918410 - L1ME2 LINE L1 -215 5949 5750 2014 152 0 0 chr10 48398917 48399220 -91917545 - AluSx SINE Alu -4 308 6 2120 129 7 0 chr10 48400989 48401284 -91915481 + AluSp SINE Alu 2 298 -15 761 103 2 0 chr10 48401449 48404282 -91912483 - CER Satellite Satellite 0 2839 1 402 191 32 11 chr10 48404409 48404503 -91912262 + MSTA LTR MaLR 4 99 -329 262 231 48 77 chr10 48404555 48404659 -91912106 + MSTA LTR MaLR 76 176 -252 1286 204 36 43 chr10 48404659 48404988 -91911777 + MSTA-int LTR MaLR 1325 1651 0 305 194 29 2 chr10 48404990 48405064 -91911701 + MSTA LTR MaLR 3 76 -356 256 214 18 0 chr10 48405167 48405223 -91911542 + THE1-int LTR MaLR 911 967 -613 * 697 215 193 26 chr10 48405221 48405454 -91911311 - THE1-int LTR MaLR -402 1178 907 1013 217 52 15 chr10 48405472 48405744 -91911021 + MSTA LTR MaLR 95 376 -52 446 243 157 7 chr10 48405772 48405912 -91910853 - MST-int LTR MaLR -984 667 507 * 4150 251 105 23 chr10 48405910 48407169 -91909596 + MSTA-int LTR MaLR 28 1389 -262 476 184 0 44 chr10 48407165 48407279 -91909486 + MSTA-int LTR MaLR 1535 1643 -8 * 460 184 20 10 chr10 48407281 48407379 -91909386 + MSTA LTR MaLR 1 99 -329 344 248 109 0 chr10 48407428 48407529 -91909236 + MSTA LTR MaLR 60 171 -257 1081 212 87 22 chr10 48407531 48407842 -91908923 + MSTA-int LTR MaLR 1321 1651 0 339 188 89 40 chr10 48407842 48407943 -91908822 + MSTA LTR MaLR 1 106 -322 263 176 82 11 chr10 48407979 48408063 -91908702 + THE1-int LTR MaLR 921 967 -613 * 265 193 53 0 chr10 48408051 48408108 -91908657 - MST-int LTR MaLR -395 1256 1197 493 215 0 0 chr10 48408208 48408374 -91908391 + ACRO1 Satellite acromeric 1 166 -55 320 188 56 104 chr10 48409069 48409213 -91907552 - L1MB8 LINE L1 -42 6136 6000 1359 137 51 19 chr10 48409226 48412205 -91904560 - GSATII Satellite centromeric -8 3075 1 * 3364 167 6 6 chr10 48412195 48412831 -91903934 + TAR1 Satellite telomeric 1433 2068 -43 293 131 0 48 chr10 48412971 48413055 -91903710 + (TTAGGG)n Simple_repeat Simple_repeat 4 83 0 458 94 7 67 chr10 48413094 48413243 -91903522 + (TTAGGG)n Simple_repeat Simple_repeat 1 140 0 6231 236 13 99 chr10 48413263 48413997 -91902768 - L1P LINE L1 -927 5219 4424 1207 140 0 0 chr10 48413997 48414175 -91902590 - AluSp SINE Alu 0 313 136 6231 236 13 99 chr10 48414175 48415830 -91900935 - L1P LINE L1 -1722 4424 2873 569 226 25 31 chr10 48415815 48415974 -91900791 - L1M3 LINE L1 -581 5599 5442 * 233 273 0 15 chr10 48415961 48416027 -91900738 - L1MA8 LINE L1 -75 6216 6152 * 699 219 33 113 chr10 48417013 48417342 -91899423 + L1MB8 LINE L1 5840 6142 -36 1026 129 2 0 chr10 48418029 48419587 -91897178 - ACRO1 Satellite acromeric 0 1560 1 623 202 0 0 chr10 48419919 48420175 -91896590 - ACRO1 Satellite acromeric 0 256 1 443 73 15 0 chr10 48420598 48420666 -91896099 + (TG)n Simple_repeat Simple_repeat 1 69 0 354 23 0 0 chr10 48420708 48420751 -91896014 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 465 144 0 0 chr10 48420920 48421010 -91895755 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 258 254 0 0 chr10 48421312 48421367 -91895398 - Tigger5 DNA MER2_type -2268 55 1 1721 112 66 0 chr10 48421755 48422042 -91894723 + L1PA10 LINE L1 5863 6168 0 1560 226 161 7 chr10 48422228 48422689 -91894076 - MER21B LTR ERV1 -133 730 199 226 250 118 0 chr10 48422941 48423017 -91893748 - MER5A DNA MER1_type -6 183 99 282 29 0 0 chr10 48423434 48423469 -91893296 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 422 88 15 0 chr10 48423511 48423579 -91893186 + (CA)n Simple_repeat Simple_repeat 1 69 0 607 84 0 0 chr10 48424187 48424270 -91892495 - HSAT5 Satellite Satellite -3 83 1 6952 199 53 1 chr10 48426416 48427716 -91889049 + L1PA12 LINE L1 637 2004 -5577 256 235 0 44 chr10 48427741 48427809 -91888956 + L1PA13 LINE L1 403 467 -6320 357 240 0 0 chr10 48427817 48427892 -91888873 - L1PA13 LINE L1 -6244 1330 1256 430 171 0 0 chr10 48427901 48427971 -91888794 - L1PA13 LINE L1 -6251 1330 1261 4753 212 134 69 chr10 48427991 48430378 -91886387 + L1PA13 LINE L1 482 3048 -3749 2300 186 145 10 chr10 48430382 48430962 -91885803 + MER4-int LTR ERV1 29 686 -5912 232 122 0 49 chr10 48431110 48431151 -91885614 + LTR49 LTR ERV1 273 311 -284 547 233 143 24 chr10 48431151 48431361 -91885404 + MER4-int LTR ERV1 862 1096 -5502 5990 91 20 3 chr10 48431370 48432463 -91884302 - L1PA7 LINE L1 -1 6153 5051 2938 128 6 0 chr10 48432489 48432987 -91883778 + L1P LINE L1 4555 5055 -1091 246 159 0 0 chr10 48433643 48433687 -91883078 - L1PA7 LINE L1 -1131 5015 4972 5356 241 62 27 chr10 48434976 48436505 -91880260 - MSTA-int LTR MaLR -40 1611 29 487 191 183 8 chr10 48436502 48436633 -91880132 + MST-int LTR MaLR 508 661 -990 * 804 246 65 51 chr10 48436671 48436964 -91879801 - MSTA LTR MaLR -56 372 76 584 246 178 21 chr10 48436969 48437205 -91879560 + MST-int LTR MaLR 976 1248 -403 254 232 18 0 chr10 48437198 48437254 -91879511 - THE1-int LTR MaLR -613 967 911 * 366 247 11 0 chr10 48437355 48437448 -91879317 - MSTA LTR MaLR -334 94 1 1083 247 16 32 chr10 48437448 48437764 -91879001 - MSTA-int LTR MaLR 0 1651 1341 293 206 49 88 chr10 48437770 48437872 -91878893 - MSTA LTR MaLR -257 171 74 484 188 21 10 chr10 48437917 48438013 -91878752 - MSTA LTR MaLR -331 97 1 409 208 47 19 chr10 48438017 48438123 -91878642 - MSTA-int LTR MaLR -5 1646 1538 251 241 35 11 chr10 48438139 48438226 -91878539 + C-rich Low_complexity Low_complexity 2 90 0 429 206 9 37 chr10 48438239 48438346 -91878419 - MSTA LTR MaLR -324 104 1 6014 237 53 23 chr10 48438346 48439917 -91876848 - MSTA-int LTR MaLR 0 1651 34 388 218 176 7 chr10 48439919 48440061 -91876704 + MST-int LTR MaLR 505 670 -981 973 224 72 19 chr10 48440090 48440353 -91876412 - MSTA LTR MaLR -54 374 98 684 220 233 22 chr10 48440380 48440612 -91876153 + THE1-int LTR MaLR 907 1187 -393 246 232 18 0 chr10 48440604 48440660 -91876105 - MSTA-int LTR MaLR -613 967 911 * 473 183 21 11 chr10 48440745 48440838 -91875927 - MSTA LTR MaLR -331 97 4 1495 195 3 41 chr10 48440841 48441184 -91875581 - MSTA-int LTR MaLR 0 1651 1322 338 252 107 0 chr10 48441187 48441290 -91875475 - MSTA LTR MaLR -257 171 58 403 237 10 0 chr10 48441335 48441432 -91875333 - MSTA LTR MaLR -328 100 3 384 169 13 0 chr10 48441434 48441511 -91875254 - MSTA-int LTR MaLR 0 1651 1574 319 177 0 32 chr10 48441513 48441575 -91875190 + MSTA LTR MaLR 317 376 -52 228 179 0 0 chr10 48441609 48441648 -91875117 - MSTA-int LTR MaLR -990 661 623 5939 224 50 31 chr10 48441651 48443176 -91873589 - MSTA-int LTR MaLR -71 1580 28 460 222 170 0 chr10 48443171 48443306 -91873459 + MST-int LTR MaLR 504 661 -990 * 1076 229 60 4 chr10 48443341 48443607 -91873158 - MSTA LTR MaLR -52 376 96 706 224 195 25 chr10 48443631 48443872 -91872893 + THE1-int LTR MaLR 907 1188 -392 237 196 36 0 chr10 48443862 48443918 -91872847 - THE1-int LTR MaLR -612 968 911 * 201 239 15 30 chr10 48443933 48444000 -91872765 + (CACCC)n Simple_repeat Simple_repeat 5 70 0 452 188 21 10 chr10 48444002 48444098 -91872667 - MSTA LTR MaLR -331 97 1 1357 214 9 46 chr10 48444100 48444445 -91872320 - MSTA-int LTR MaLR -2 1649 1318 375 200 18 73 chr10 48444452 48444562 -91872203 - MSTA LTR MaLR -269 159 56 369 219 42 34 chr10 48444626 48444745 -91872020 - MSTA LTR MaLR -308 120 1 5633 241 60 20 chr10 48444745 48446303 -91870462 - MSTA-int LTR MaLR 0 1651 32 542 183 176 0 chr10 48446306 48446437 -91870328 + MST-int LTR MaLR 508 661 -990 1128 217 59 21 chr10 48446471 48446761 -91870004 - MSTA LTR MaLR -52 376 76 722 226 226 22 chr10 48446765 48446991 -91869774 + THE1-int LTR MaLR 907 1178 -402 304 281 0 0 chr10 48447180 48447262 -91869503 - MSTA-int LTR MaLR -1542 109 28 * 402 238 73 13 chr10 48447259 48447411 -91869354 + THE1-int LTR MaLR 490 621 -959 1321 244 29 32 chr10 48447426 48447803 -91868962 - MSTA LTR MaLR -52 376 1 1292 151 34 17 chr10 48447803 48448041 -91868724 - MSTA-int LTR MaLR 0 1651 1410 1245 191 13 0 chr10 48448048 48448283 -91868482 - MSTA-int LTR MaLR -1401 250 13 1383 242 90 6 chr10 48448294 48448649 -91868116 - MSTA LTR MaLR -43 385 1 2064 108 103 40 chr10 48450665 48451093 -91865672 + SN5 Other centromeric 1 455 0 246 193 0 0 chr10 48451336 48451393 -91865372 + (TG)n Simple_repeat Simple_repeat 2 58 0 273 262 0 12 chr10 48451876 48451960 -91864805 + HSAT5 Satellite Satellite 3 85 -1 294 241 0 41 chr10 48452154 48452326 -91864439 + HSAT5 Satellite Satellite 1 164 -1 782 239 28 0 chr10 48452925 48453105 -91863660 + L1MC4 LINE L1 6819 7003 -1039 809 218 39 21 chr10 48453147 48453381 -91863384 + L1MC4 LINE L1 7137 7374 -668 211 259 25 49 chr10 48454240 48454321 -91862444 - L2 LINE L2 -227 3045 2967 21 0 0 0 chr10 48454946 48454967 -91861798 + AT_rich Low_complexity Low_complexity 1 21 0 2138 127 3 0 chr10 48455329 48455621 -91861144 + AluSc SINE Alu 1 293 -16 3956 192 29 31 chr10 48455771 48456918 -91859847 - L1PA16 LINE L1 -1 6165 5026 1836 166 17 0 chr10 48456954 48457256 -91859509 - AluSx SINE Alu -5 307 1 398 108 0 46 chr10 48457434 48457499 -91859266 - Alu SINE Alu 0 301 240 1593 148 0 4 chr10 48457663 48457906 -91858859 + AluSg SINE Alu 57 298 -12 412 248 0 0 chr10 48458859 48458960 -91857805 + L1MA9 LINE L1 6163 6263 -49 639 0 0 0 chr10 48460559 48460630 -91856135 + (TA)n Simple_repeat Simple_repeat 2 72 0 720 199 0 33 chr10 48461441 48461592 -91855173 + AluJo SINE Alu 6 151 -161 248 183 17 0 chr10 48462254 48462314 -91854451 + (TA)n Simple_repeat Simple_repeat 1 61 0 1842 195 121 4 chr10 48462480 48462959 -91853806 - SATR1 Satellite Satellite 0 535 1 1950 186 98 32 chr10 48462990 48464067 -91852698 + SATR1 Satellite Satellite 1 1147 -1 2539 171 116 12 chr10 48464085 48466187 -91850578 - SATR1 Satellite Satellite -110 2321 1 1372 186 85 0 chr10 48466187 48466535 -91850230 + L1PA15 LINE L1 4964 5337 -829 438 116 411 0 chr10 48466535 48466647 -91850118 + LTR1B LTR ERV1 427 584 -242 1135 133 53 0 chr10 48466652 48466840 -91849925 + L1PA15 LINE L1 5347 5544 -621 2970 189 59 27 chr10 48466840 48467594 -91849171 + LTR1B LTR ERV1 1 785 0 3967 138 6 8 chr10 48467597 48468220 -91848545 + L1PA15 LINE L1 5544 6165 0 259 318 90 23 chr10 48468239 48468538 -91848227 + L1ME4a LINE L1 5646 5964 -157 25 65 0 0 chr10 48468709 48468755 -91848010 + AT_rich Low_complexity Low_complexity 1 46 0 353 189 40 0 chr10 48469722 48469796 -91846969 - L1ME1 LINE L1 -4 6162 6086 555 279 40 64 chr10 48469804 48470056 -91846709 - L1M4 LINE L1 -2284 3862 3617 2219 119 3 3 chr10 48470056 48470367 -91846398 - AluSp SINE Alu -2 311 1 555 279 40 64 chr10 48470367 48470412 -91846353 - L1M4 LINE L1 -2529 3617 3572 1596 173 50 3 chr10 48470413 48470758 -91846007 - Tigger5 DNA MER2_type -1 2322 1 1058 252 82 58 chr10 48470760 48471466 -91845299 - L1M4 LINE L1 -2578 3568 2863 3199 232 125 9 chr10 48471466 48472026 -91844739 - L1MC4 LINE L1 -364 7678 7184 1957 140 3 3 chr10 48472026 48472318 -91844447 - AluSx SINE Alu -20 292 1 3199 232 125 9 chr10 48472318 48472757 -91844008 - L1MC4 LINE L1 -858 7184 2757 1982 142 7 0 chr10 48473651 48473971 -91842794 + AluSx SINE Alu 1 322 0 28 48 0 0 chr10 48474226 48474268 -91842497 + AT_rich Low_complexity Low_complexity 1 42 0 537 110 44 11 chr10 48474272 48474363 -91842402 + L1PB1 LINE L1 6056 6149 -2 1550 214 3 7 chr10 48474639 48474933 -91841832 + AluJb SINE Alu 1 293 -19 392 206 14 0 chr10 48474933 48475006 -91841759 + L1MB8 LINE L1 5495 5568 -598 475 246 0 54 chr10 48475025 48475155 -91841610 - FLAM_C SINE Alu -19 124 2 1031 236 5 0 chr10 48475157 48475373 -91841392 + L1MB8 LINE L1 5557 5773 -411 493 182 0 98 chr10 48475467 48475535 -91841230 + L1MB8 LINE L1 6055 6105 -73 1442 233 0 0 chr10 48475535 48475840 -91840925 - AluJb SINE Alu -7 305 1 493 182 0 98 chr10 48475840 48475903 -91840862 + L1MB8 LINE L1 6105 6173 -5 1911 162 0 7 chr10 48475923 48476226 -91840539 + AluSx SINE Alu 6 306 -6 1563 191 3 24 chr10 48476241 48476539 -91840226 + AluJo SINE Alu 11 302 -10 1951 159 3 0 chr10 48476843 48477145 -91839620 + AluSg SINE Alu 1 303 -7 244 208 9 94 chr10 48477347 48477453 -91839312 - LTR37A LTR ERV1 -89 337 241 21 0 0 0 chr10 48477454 48477475 -91839290 + AT_rich Low_complexity Low_complexity 1 21 0 1017 219 4 21 chr10 48477617 48477859 -91838906 - AluJo SINE Alu -26 286 49 681 223 0 0 chr10 48477923 48478053 -91838712 - FLAM_C SINE Alu -3 130 1 934 261 106 14 chr10 48478144 48478641 -91838124 + L2 LINE L2 2541 3073 -240 551 254 8 0 chr10 48478672 48478794 -91837971 - AluJo/FRAM SINE Alu -8 304 182 396 254 0 0 chr10 48478796 48478889 -91837876 - AluJ/FLAM SINE Alu -209 93 11 1495 185 22 61 chr10 48478898 48479260 -91837505 - MLT1D LTR MaLR -8 497 150 529 213 15 22 chr10 48479263 48479399 -91837366 + FLAM_C SINE Alu 9 143 0 1424 224 7 13 chr10 48479401 48479704 -91837061 + AluJo SINE Alu 1 301 -11 236 311 14 0 chr10 48479704 48479778 -91836987 + MER21B LTR ERV1 16 90 -773 2348 239 68 66 chr10 48479799 48480218 -91836547 + MER21B LTR ERV1 19 435 -428 1355 180 0 102 chr10 48480218 48480552 -91836213 - AluJb SINE Alu -11 301 2 2348 239 68 66 chr10 48480552 48480630 -91836135 + MER21B LTR ERV1 435 511 -352 1665 192 3 10 chr10 48480630 48480921 -91835844 + AluJo SINE Alu 9 297 -15 2348 239 68 66 chr10 48480921 48481209 -91835556 + MER21B LTR ERV1 511 806 -57 2161 120 0 3 chr10 48481752 48482044 -91834721 + AluSx SINE Alu 1 291 -21 1715 156 6 52 chr10 48482199 48482525 -91834240 - AluSx SINE Alu -1 311 1 1574 195 26 15 chr10 48482686 48483025 -91833740 + L1M3 LINE L1 5480 5822 -361 530 228 0 0 chr10 48483033 48483134 -91833631 + AluJ/FLAM SINE Alu 2 102 -210 6116 230 65 26 chr10 48483678 48486093 -91830672 + L1M3 LINE L1 3095 5610 -570 235 273 0 15 chr10 48487222 48487288 -91829477 + L1MA8 LINE L1 6152 6216 -75 * 629 197 33 33 chr10 48487275 48487427 -91829338 + L1M3 LINE L1 5442 5593 -587 * 6823 220 21 102 chr10 48487418 48487704 -91829061 + L1P LINE L1 2873 3181 -2965 225 0 0 0 chr10 48487704 48487729 -91829036 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6823 220 21 102 chr10 48487729 48489078 -91827687 + L1P LINE L1 3181 4416 -1730 1185 137 0 0 chr10 48489078 48489253 -91827512 + AluSp SINE Alu 136 310 -3 6823 220 21 102 chr10 48489253 48489997 -91826768 + L1P LINE L1 4416 5219 -927 484 107 6 65 chr10 48489998 48490166 -91826599 + (CCCTAA)n Simple_repeat Simple_repeat 1 158 0 293 131 0 48 chr10 48490205 48490289 -91826476 + (CCCTAA)n Simple_repeat Simple_repeat 4 83 0 3153 166 8 8 chr10 48490429 48491036 -91825729 - TAR1 Satellite telomeric -43 2068 1462 1439 134 49 15 chr10 48491026 48492559 -91824206 + GSATII Satellite centromeric 1 1481 -1736 * 216 0 0 0 chr10 48492559 48492583 -91824182 + (TA)n Simple_repeat Simple_repeat 2 25 0 1439 134 49 15 chr10 48492583 48494076 -91822689 + GSATII Satellite centromeric 1481 3153 -64 367 173 60 107 chr10 48494089 48494239 -91822526 + L1MB8 LINE L1 6000 6142 -36 1113 108 2 1 chr10 48494929 48496780 -91819985 - ACRO1 Satellite acromeric 0 1852 1 636 198 0 0 chr10 48497123 48497368 -91819397 - ACRO1 Satellite acromeric 0 245 1 404 91 15 0 chr10 48497789 48497855 -91818910 + (TG)n Simple_repeat Simple_repeat 1 67 0 462 18 0 0 chr10 48497897 48497952 -91818813 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 233 266 31 0 chr10 48498378 48498442 -91818323 + MER5A DNA MER1_type 118 183 -6 906 227 103 7 chr10 48498694 48499155 -91817610 + MER21B LTR ERV1 199 730 -133 1859 104 66 0 chr10 48499341 48499628 -91817137 - L1PA10 LINE L1 0 6168 5863 276 254 0 0 chr10 48500016 48500071 -91816694 + Tigger5 DNA MER2_type 1 55 -2268 681 73 0 0 chr10 48500373 48500469 -91816296 + (GGAA)n Simple_repeat Simple_repeat 4 99 0 702 207 36 116 chr10 48500527 48500856 -91815909 + L1MB8 LINE L1 5840 6142 -36 1130 105 3 1 chr10 48501546 48502955 -91813810 - ACRO1 Satellite acromeric 0 1411 1 628 201 0 0 chr10 48503287 48503543 -91813222 - ACRO1 Satellite acromeric 0 256 1 324 111 0 0 chr10 48503967 48504021 -91812744 + (TG)n Simple_repeat Simple_repeat 1 54 0 282 29 0 0 chr10 48504070 48504105 -91812660 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 210 281 31 0 chr10 48504533 48504597 -91812168 + MER5A DNA MER1_type 118 183 -6 1451 241 161 7 chr10 48504849 48505310 -91811455 + MER21B LTR ERV1 199 730 -133 1839 92 70 0 chr10 48505512 48505783 -91810982 - L1PA10 LINE L1 -16 6152 5863 276 254 0 0 chr10 48506171 48506226 -91810539 + Tigger5 DNA MER2_type 1 55 -2268 645 76 0 0 chr10 48506528 48506620 -91810145 + (GGAA)n Simple_repeat Simple_repeat 4 95 0 613 206 28 111 chr10 48506678 48506930 -91809835 + L1MB8 LINE L1 5840 6070 -108 642 165 0 0 chr10 48507031 48507134 -91809631 + AluSp/q SINE Alu 196 298 -15 1980 153 7 0 chr10 48507597 48507898 -91808867 + AluSx SINE Alu 1 303 -9 190 225 0 0 chr10 48508180 48508220 -91808545 + L2 LINE L2 3262 3301 -12 1275 257 31 3 chr10 48508441 48508733 -91808032 - AluJo SINE Alu -12 300 1 611 81 23 0 chr10 48511473 48511560 -91805205 + L1PA5 LINE L1 6066 6154 0 1982 138 0 3 chr10 48513561 48513877 -91802888 - AluSq SINE Alu 0 315 1 523 263 91 25 chr10 48513996 48514239 -91802526 + L1MB7 LINE L1 5401 5659 -462 22 0 0 0 chr10 48514310 48514332 -91802433 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 48515258 48515281 -91801484 + AT_rich Low_complexity Low_complexity 1 23 0 213 39 0 0 chr10 48516037 48516063 -91800702 + (TG)n Simple_repeat Simple_repeat 2 27 0 997 244 40 14 chr10 48517323 48517598 -91799167 + L1MB7 LINE L1 5903 6184 0 396 306 51 13 chr10 48518320 48518477 -91798288 - L2 LINE L2 -430 2884 2722 23 33 0 0 chr10 48518692 48518722 -91798043 + AT_rich Low_complexity Low_complexity 1 30 0 1851 210 75 44 chr10 48519555 48520059 -91796706 - L1MB8 LINE L1 -6 6172 5653 1399 171 4 38 chr10 48521150 48521414 -91795351 + AluJb SINE Alu 38 292 -20 2201 137 0 0 chr10 48521833 48522140 -91794625 + AluSx SINE Alu 1 307 -5 665 117 11 0 chr10 48522491 48522585 -91794180 + AluSg SINE Alu 3 97 -213 2907 128 26 7 chr10 48522586 48523040 -91793725 - L1PA10 LINE L1 -51 6117 5655 1227 218 96 30 chr10 48523135 48523498 -91793267 - MER4E LTR ERV1 -391 388 2 1266 204 68 12 chr10 48523718 48524041 -91792724 - L1MB8 LINE L1 -5 6173 5833 1947 157 94 7 chr10 48524041 48524446 -91792319 - MER61C LTR ERV1 0 434 11 2429 189 53 46 chr10 48524455 48525505 -91791260 - L1MB8 LINE L1 -342 5836 4776 678 289 104 19 chr10 48526839 48527225 -91789540 - MLT1G1 LTR MaLR -23 572 79 1319 178 68 0 chr10 48527256 48527537 -91789228 - L1MA5 LINE L1 0 6300 6001 1003 255 27 8 chr10 48527601 48527860 -91788905 - AluJo SINE Alu -48 264 1 2935 216 24 15 chr10 48527861 48528989 -91787776 - L1MA5 LINE L1 -354 5946 4808 1479 182 24 30 chr10 48529102 48529399 -91787366 - AluJo SINE Alu -12 300 6 327 49 0 0 chr10 48530207 48530248 -91786517 + (TA)n Simple_repeat Simple_repeat 2 42 0 418 238 0 0 chr10 48531852 48531953 -91784812 - L1MA9 LINE L1 -49 6263 6163 1542 137 53 15 chr10 48533012 48533274 -91783491 - LTR1B LTR ERV1 -554 272 1 1052 149 53 0 chr10 48533274 48533462 -91783303 - L1P4 LINE L1 -621 5544 5347 414 125 411 0 chr10 48533467 48533579 -91783186 - LTR1B LTR ERV1 -242 584 427 1354 192 39 0 chr10 48533620 48533927 -91782838 - L1P4 LINE L1 -864 5282 4964 2412 167 112 3 chr10 48533927 48535429 -91781336 - SATR1 Satellite Satellite 0 1664 1 2140 184 117 6 chr10 48535455 48536174 -91780591 - SATR1 Satellite Satellite -142 799 1 1970 182 103 28 chr10 48536192 48537270 -91779495 + SATR1 Satellite Satellite 1 1158 -3 1714 202 121 5 chr10 48537301 48537781 -91778984 + SATR1 Satellite Satellite 1 535 -105 230 190 17 0 chr10 48537947 48538005 -91778760 + (TA)n Simple_repeat Simple_repeat 1 59 0 2038 181 116 16 chr10 48540699 48540755 -91776010 - SATR1 Satellite Satellite -4 1710 1661 2325 72 3 0 chr10 48540755 48541047 -91775718 - AluY SINE Alu -18 293 1 2038 181 116 16 chr10 48541047 48542255 -91774510 - SATR1 Satellite Satellite -53 1661 1 2343 128 108 11 chr10 48542283 48542816 -91773949 - SATR1 Satellite Satellite -1 585 1 1379 186 30 58 chr10 48542833 48543234 -91773531 + MLT2B3 LTR ERVL 176 554 0 36 23 0 0 chr10 48544116 48544159 -91772606 + AT_rich Low_complexity Low_complexity 1 43 0 255 141 51 64 chr10 48544204 48544282 -91772483 - AluJb SINE Alu -185 117 41 22 0 0 0 chr10 48544616 48544638 -91772127 + AT_rich Low_complexity Low_complexity 1 22 0 1100 137 127 50 chr10 48544793 48545092 -91771673 + MER33 DNA MER1_type 1 322 -2 1007 130 31 0 chr10 48547007 48547168 -91769597 - MER68 LTR ERV1 -396 166 1 21 57 0 0 chr10 48547201 48547236 -91769529 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr10 48547570 48547594 -91769171 + AT_rich Low_complexity Low_complexity 1 24 0 1942 156 3 0 chr10 48547705 48548024 -91768741 - AluSq SINE Alu 0 320 1 2111 136 0 0 chr10 48548090 48548385 -91768380 - AluSx SINE Alu -17 295 1 2310 153 5 43 chr10 48548392 48548829 -91767936 - L1MC1 LINE L1 0 6333 5914 740 172 45 0 chr10 48549854 48549988 -91766777 - Tigger7 DNA MER2_type 0 2487 2348 700 136 52 39 chr10 48549994 48550148 -91766617 + MER21A LTR ERV1 747 902 -29 423 0 0 0 chr10 48550538 48550585 -91766180 + (CAA)n Simple_repeat Simple_repeat 2 48 0 621 219 0 24 chr10 48550619 48550742 -91766023 - FLAM_A SINE Alu -17 125 6 196 387 81 14 chr10 48550897 48551119 -91765646 - MIR SINE MIR -6 256 20 216 339 71 9 chr10 48551725 48551837 -91764928 - MIR SINE MIR -121 141 23 22 35 0 0 chr10 48552845 48552874 -91763891 + AT_rich Low_complexity Low_complexity 1 29 0 582 202 0 0 chr10 48554180 48554279 -91762486 + FLAM_A SINE Alu 1 99 -43 1887 152 0 21 chr10 48554532 48554844 -91761921 + AluSx SINE Alu 1 306 0 1093 230 32 57 chr10 48555027 48555310 -91761455 - AluJb SINE Alu -24 288 13 6128 60 1 1 chr10 48555682 48556460 -91760305 - L1PA5 LINE L1 -1 6153 5376 1485 213 0 7 chr10 48556845 48557127 -91759638 - AluJo SINE Alu -30 282 3 1316 240 0 24 chr10 48557161 48557457 -91759308 + AluJo SINE Alu 1 289 -23 2296 84 3 3 chr10 48557654 48557950 -91758815 + AluY SINE Alu 3 298 -13 251 171 195 12 chr10 48558801 48558883 -91757882 - MER5A DNA MER1_type -83 106 10 1913 155 0 0 chr10 48562082 48562378 -91754387 - AluSx SINE Alu -11 301 6 1943 141 10 0 chr10 48564150 48564441 -91752324 + AluSp SINE Alu 2 295 -18 1895 163 7 0 chr10 48564900 48565201 -91751564 + AluSx SINE Alu 1 303 -9 206 225 0 0 chr10 48565482 48565522 -91751243 + L2 LINE L2 3262 3301 -12 1257 262 31 3 chr10 48565743 48566037 -91750728 - AluJo SINE Alu -10 302 1 25 0 0 0 chr10 48566736 48566761 -91750004 + AT_rich Low_complexity Low_complexity 1 25 0 545 106 24 0 chr10 48568768 48568853 -91747912 + L1PA5 LINE L1 6066 6152 -2 29 60 0 0 chr10 48570618 48570668 -91746097 + AT_rich Low_complexity Low_complexity 1 50 0 1998 154 0 3 chr10 48570852 48571163 -91745602 - AluSq SINE Alu -3 310 1 524 279 88 20 chr10 48571277 48571525 -91745240 + L1MB7 LINE L1 5396 5659 -478 22 0 0 0 chr10 48571596 48571618 -91745147 + AT_rich Low_complexity Low_complexity 1 22 0 973 240 40 14 chr10 48574592 48574867 -91741898 + L1MB7 LINE L1 5903 6184 0 436 312 51 13 chr10 48575588 48575745 -91741020 - L2 LINE L2 -430 2884 2722 1668 229 78 44 chr10 48576817 48577320 -91739445 - L1MB8 LINE L1 -6 6172 5653 1331 171 0 73 chr10 48578415 48578690 -91738075 + AluJb SINE Alu 38 292 -20 207 0 0 0 chr10 48579166 48579189 -91737576 + (TA)n Simple_repeat Simple_repeat 1 23 0 423 238 0 0 chr10 48580797 48580898 -91735867 - L1MA9 LINE L1 -49 6263 6163 1225 162 0 0 chr10 48581846 48582037 -91734728 - AluSg/x SINE Alu -9 303 113 30 89 0 0 chr10 48582205 48582284 -91734481 + AT_rich Low_complexity Low_complexity 1 79 0 2055 108 10 26 chr10 48582542 48582847 -91733918 + AluSg1 SINE Alu 1 300 -9 1816 169 17 0 chr10 48583025 48583320 -91733445 + AluSx SINE Alu 1 300 -12 4280 189 27 27 chr10 48583356 48584499 -91732266 + L1PA16 LINE L1 5026 6166 0 2246 129 0 0 chr10 48584650 48584959 -91731806 - AluSc SINE Alu 0 309 1 21 0 0 0 chr10 48585321 48585342 -91731423 + AT_rich Low_complexity Low_complexity 1 21 0 183 252 271 28 chr10 48585941 48586048 -91730717 + L2 LINE L2 2913 3045 -227 881 200 38 25 chr10 48586906 48587141 -91729624 - L1MC4 LINE L1 -668 7374 7137 775 250 22 0 chr10 48587183 48587363 -91729402 - L1MC4 LINE L1 -1039 7003 6820 293 236 0 62 chr10 48587964 48588136 -91728629 - HSAT5 Satellite Satellite -1 161 1 251 182 0 104 chr10 48588296 48588373 -91728392 - HSAT5 Satellite Satellite -17 69 1 268 216 14 14 chr10 48588384 48588458 -91728307 - HSAT5 Satellite Satellite -12 74 1 336 64 0 0 chr10 48588896 48588943 -91727822 + (CA)n Simple_repeat Simple_repeat 2 48 0 1554 131 83 51 chr10 48589259 48589634 -91727131 - SN5 Other centromeric -68 387 1 1859 162 17 0 chr10 48590374 48590670 -91726095 + AluSx SINE Alu 1 301 -11 4255 182 31 30 chr10 48590706 48591847 -91724918 + L1PA16 LINE L1 5026 6166 0 2210 130 0 0 chr10 48591995 48592296 -91724469 - AluSc SINE Alu -8 301 1 21 0 0 0 chr10 48592658 48592679 -91724086 + AT_rich Low_complexity Low_complexity 1 21 0 182 252 271 28 chr10 48593276 48593383 -91723382 + L2 LINE L2 2913 3045 -227 915 191 38 25 chr10 48594243 48594478 -91722287 - L1MC4 LINE L1 -668 7374 7137 766 249 22 0 chr10 48594520 48594701 -91722064 - L1MC4 LINE L1 -1039 7003 6819 269 243 36 30 chr10 48595259 48595430 -91721335 - HSAT5 Satellite Satellite -2 172 1 261 280 6 6 chr10 48595674 48595782 -91720983 - HSAT5 Satellite Satellite -1 108 1 257 182 0 15 chr10 48596220 48596286 -91720479 + (CA)n Simple_repeat Simple_repeat 2 66 0 1950 102 60 50 chr10 48596573 48596956 -91719809 - SN5 Other centromeric -68 387 1 1348 236 105 3 chr10 48599032 48599366 -91717399 + MSTA LTR MaLR 1 368 -60 1328 167 17 0 chr10 48599395 48599629 -91717136 + MSTA-int LTR MaLR 13 250 -1401 1001 156 11 17 chr10 48599662 48599842 -91716923 + MSTA-int LTR MaLR 1402 1580 0 1185 240 90 28 chr10 48599842 48600196 -91716569 + MSTA LTR MaLR 1 376 -52 405 239 162 0 chr10 48600221 48600363 -91716402 - MST-int LTR MaLR -981 670 506 339 274 9 0 chr10 48600360 48600466 -91716299 + MSTA-int LTR MaLR 28 134 -1517 * 258 250 18 0 chr10 48600577 48600633 -91716132 + MSTA-int LTR MaLR 911 967 -613 * 809 192 188 58 chr10 48600586 48600862 -91715903 - THE1-int LTR MaLR -362 1218 907 1123 228 55 17 chr10 48600866 48601156 -91715609 + MSTA LTR MaLR 76 376 -52 510 211 165 0 chr10 48601190 48601323 -91715442 - MST-int LTR MaLR -990 661 507 5341 244 91 10 chr10 48601325 48602824 -91713941 + MSTA-int LTR MaLR 32 1651 0 364 227 42 34 chr10 48602824 48602943 -91713822 + MSTA LTR MaLR 1 120 -308 302 204 28 74 chr10 48603007 48603115 -91713650 + MSTA LTR MaLR 56 158 -270 1287 224 6 46 chr10 48603115 48603441 -91713324 + MSTA-int LTR MaLR 1337 1649 -2 483 167 21 10 chr10 48603443 48603539 -91713226 + MSTA LTR MaLR 1 97 -331 238 170 38 19 chr10 48603635 48603688 -91713077 + THE1-int LTR MaLR 911 964 -616 * 679 226 205 25 chr10 48603682 48603921 -91712844 - THE1-int LTR MaLR -392 1188 907 1120 229 56 4 chr10 48603945 48604212 -91712553 + MSTA LTR MaLR 96 376 -52 487 247 32 26 chr10 48604229 48604383 -91712382 - THE1-int LTR MaLR -963 617 463 * 4321 228 62 27 chr10 48604378 48605519 -91711246 + MSTA-int LTR MaLR 28 1208 -443 4147 182 5 94 chr10 48605619 48607352 -91709413 + L1PA13 LINE L1 1523 3052 -3745 2366 186 121 11 chr10 48607353 48607916 -91708849 + MER4-int LTR ERV1 29 653 -5945 222 37 0 0 chr10 48608001 48608028 -91708737 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 23 33 0 0 chr10 48608053 48608083 -91708682 + AT_rich Low_complexity Low_complexity 1 30 0 281 91 0 45 chr10 48608090 48608134 -91708631 + LTR49 LTR ERV1 273 314 -281 615 217 37 25 chr10 48608181 48608342 -91708423 + MER4-int LTR ERV1 935 1097 -5501 6258 90 41 0 chr10 48608351 48609433 -91707332 - L1PA7 LINE L1 0 6154 5051 3157 119 8 0 chr10 48609459 48609956 -91706809 + L1P LINE L1 4555 5055 -1091 1581 224 52 3 chr10 48611852 48612195 -91704570 + MSTA LTR MaLR 9 368 -60 1373 176 0 0 chr10 48612224 48612462 -91704303 + MSTA-int LTR MaLR 13 250 -1401 * 1420 159 8 12 chr10 48612459 48612711 -91704054 + MSTA-int LTR MaLR 1401 1651 0 996 258 7 39 chr10 48612711 48612994 -91703771 + MSTA LTR MaLR 1 274 -154 248 224 24 35 chr10 48613000 48613101 -91703664 - HSAT5 Satellite Satellite -1 99 1 341 195 12 12 chr10 48613331 48613429 -91703336 - HSAT5 Satellite Satellite -3 98 1 628 119 0 32 chr10 48613590 48613776 -91702989 - HSAT5 Satellite Satellite 0 180 1 264 170 10 160 chr10 48613792 48613892 -91702873 - HSAT5 Satellite Satellite -1 85 1 644 130 10 16 chr10 48614238 48614487 -91702278 + CER Satellite Satellite 1 247 -6 1593 222 52 3 chr10 48615605 48615948 -91700817 + MSTA LTR MaLR 9 368 -60 1350 181 0 0 chr10 48615977 48616215 -91700550 + MSTA-int LTR MaLR 13 250 -1401 1318 175 8 12 chr10 48616212 48616464 -91700301 + MSTA-int LTR MaLR 1401 1651 0 * 958 261 7 39 chr10 48616464 48616747 -91700018 + MSTA LTR MaLR 1 274 -154 241 235 24 35 chr10 48616753 48616854 -91699911 - HSAT5 Satellite Satellite -1 99 1 316 214 0 20 chr10 48617070 48617154 -91699611 - HSAT5 Satellite Satellite -3 83 1 643 115 0 32 chr10 48617315 48617501 -91699264 - HSAT5 Satellite Satellite 0 180 1 264 170 10 160 chr10 48617517 48617617 -91699148 - HSAT5 Satellite Satellite -1 85 1 793 107 3 0 chr10 48617964 48621464 -91695301 + CER Satellite Satellite 1 3509 -4 5267 229 52 37 chr10 48621564 48623011 -91693754 + MST-int LTR MaLR 114 1583 -68 243 154 0 0 chr10 48623011 48623050 -91693715 + MST-int LTR MaLR 623 661 -990 313 175 0 48 chr10 48623084 48623147 -91693618 - MSTA LTR MaLR -52 376 317 403 169 13 0 chr10 48623149 48623226 -91693539 + MST-int LTR MaLR 1574 1651 0 374 253 10 0 chr10 48623226 48623325 -91693440 + MSTA LTR MaLR 1 100 -328 362 241 139 0 chr10 48623370 48623478 -91693287 + MSTA LTR MaLR 58 180 -248 1480 203 6 41 chr10 48623478 48623818 -91692947 + MSTA-int LTR MaLR 1324 1651 0 506 167 21 10 chr10 48623818 48623914 -91692851 + MSTA LTR MaLR 1 97 -331 267 228 18 0 chr10 48623998 48624055 -91692710 + THE1-int LTR MaLR 910 967 -613 745 220 216 22 chr10 48624062 48624294 -91692471 - THE1-int LTR MaLR -397 1183 907 1044 235 62 28 chr10 48624298 48624587 -91692178 + MSTA LTR MaLR 76 374 -54 384 217 175 7 chr10 48624616 48624759 -91692006 - MST-int LTR MaLR -981 670 504 * 6378 231 50 21 chr10 48624754 48626333 -91690432 + MSTA-int LTR MaLR 28 1651 0 428 219 10 0 chr10 48626333 48626429 -91690336 + MSTA LTR MaLR 1 97 -331 228 198 21 73 chr10 48626448 48626544 -91690221 + G-rich Low_complexity Low_complexity 4 94 0 593 152 18 0 chr10 48626555 48626667 -91690098 + MSTA-int LTR MaLR 1538 1651 0 447 229 10 0 chr10 48626667 48626763 -91690002 + MSTA LTR MaLR 1 97 -331 293 197 41 107 chr10 48626788 48626910 -91689855 + MSTA LTR MaLR 58 171 -257 1115 197 33 56 chr10 48626916 48627220 -91689545 + MSTA-int LTR MaLR 1341 1637 -14 384 194 105 44 chr10 48627220 48627340 -91689425 + MSTA LTR MaLR 1 113 -262 236 238 36 12 chr10 48627428 48627512 -91689253 + MST-int LTR MaLR 979 1064 -587 * 687 224 211 21 chr10 48627474 48627711 -91689054 - THE1-int LTR MaLR -392 1188 907 867 254 55 46 chr10 48627715 48628022 -91688743 + MSTA LTR MaLR 76 385 -43 581 165 173 8 chr10 48628048 48628181 -91688584 - MST-int LTR MaLR -990 661 507 * 5041 251 55 8 chr10 48628179 48629480 -91687285 + MSTA-int LTR MaLR 28 1389 -262 472 209 9 0 chr10 48629482 48629592 -91687173 + MSTA-int LTR MaLR 1541 1651 0 495 174 20 10 chr10 48629592 48629690 -91687075 + MSTA LTR MaLR 1 99 -329 287 274 113 9 chr10 48629739 48629845 -91686920 + MSTA LTR MaLR 60 176 -252 1163 226 88 16 chr10 48629845 48630150 -91686615 + MSTA-int LTR MaLR 1325 1651 0 327 216 102 0 chr10 48630150 48630238 -91686527 + MSTA LTR MaLR 1 97 -331 246 196 22 0 chr10 48630326 48630372 -91686393 + THE1-int LTR MaLR 921 967 -613 * 844 209 188 26 chr10 48630370 48630604 -91686161 - THE1-int LTR MaLR -402 1178 907 513 273 28 7 chr10 48630650 48630793 -91685972 + MSTA LTR MaLR 129 274 -154 290 201 31 13 chr10 48630790 48630880 -91685885 - HSAT5 Satellite Satellite -1 91 1 * 285 256 0 18 chr10 48631020 48631122 -91685643 - HSAT5 Satellite Satellite -4 100 1 589 84 12 6 chr10 48631342 48631439 -91685326 - HSAT5 Satellite Satellite 0 97 1 7008 207 52 1 chr10 48633710 48635011 -91681754 + L1PA12 LINE L1 637 2004 -5577 385 227 0 0 chr10 48635112 48635187 -91681578 - L1PA13 LINE L1 -6244 1330 1256 454 186 0 0 chr10 48635196 48635266 -91681499 - L1PA13 LINE L1 -6251 1330 1261 1993 276 166 6 chr10 48635286 48635956 -91680809 + L1PA13 LINE L1 482 1258 -5529 3090 203 2 16 chr10 48635958 48636563 -91680202 + L1PA13 LINE L1 1396 1991 -4796 684 190 8 0 chr10 48636600 48636721 -91680044 - L1PA13 LINE L1 -6177 1397 1276 533 129 0 0 chr10 48636713 48636798 -91679967 + L1PA13 LINE L1 1994 2078 -4709 * 6569 208 57 1 chr10 48636918 48638149 -91678616 + L1PA12 LINE L1 705 2004 -5577 250 269 0 30 chr10 48638174 48638241 -91678524 + L1PA13 LINE L1 403 467 -6320 385 227 0 0 chr10 48638249 48638324 -91678441 - L1PA13 LINE L1 -6244 1330 1256 420 159 14 0 chr10 48638333 48638402 -91678363 - L1PA13 LINE L1 -6251 1330 1261 2127 98 10 0 chr10 48638560 48638857 -91677908 - AluY SINE Alu -9 302 3 2034 133 0 0 chr10 48638861 48639155 -91677610 - AluSx SINE Alu -17 295 2 30 27 0 0 chr10 48639155 48639192 -91677573 + AT_rich Low_complexity Low_complexity 1 37 0 1880 115 6 42 chr10 48639316 48639628 -91677137 - AluSx SINE Alu -11 301 1 424 227 31 8 chr10 48639759 48639887 -91676878 + L1MB2 LINE L1 2920 3050 -3096 231 227 30 0 chr10 48639883 48639949 -91676816 + L1MB2 LINE L1 2983 3050 -3096 * 294 182 30 0 chr10 48639945 48640011 -91676754 + L1MB2 LINE L1 2983 3050 -3096 1610 259 55 12 chr10 48640014 48640675 -91676090 + L1MB2 LINE L1 2990 3678 -2468 * 3379 228 52 78 chr10 48640670 48641097 -91675668 + L1MB2 LINE L1 3935 4371 -1775 1749 165 0 50 chr10 48641097 48641419 -91675346 + AluSx SINE Alu 1 306 -6 3379 228 52 78 chr10 48641419 48641495 -91675270 + L1MB2 LINE L1 4371 4447 -1699 1947 137 0 7 chr10 48641495 48641801 -91674964 + AluSx SINE Alu 1 304 -8 3379 228 52 78 chr10 48641801 48641832 -91674933 + L1MB2 LINE L1 4447 4477 -1669 2447 57 0 16 chr10 48641832 48642148 -91674617 + AluY SINE Alu 1 311 0 3379 228 52 78 chr10 48642148 48642934 -91673831 + L1MB2 LINE L1 4477 5223 -923 1108 172 110 0 chr10 48642934 48643143 -91673622 - MER46A DNA MER2_type -3 233 2 3379 228 52 78 chr10 48643143 48643200 -91673565 + L1MB2 LINE L1 5223 5280 -866 2199 184 175 64 chr10 48644235 48645035 -91671730 + L1MB2 LINE L1 5281 6169 -2 22 0 0 0 chr10 48645035 48645057 -91671708 + AT_rich Low_complexity Low_complexity 1 22 0 1453 183 10 17 chr10 48645061 48645351 -91671414 - AluJb SINE Alu -24 288 1 1158 252 118 55 chr10 48645352 48645462 -91671303 + L1MEc LINE L1 2084 2186 -4029 1564 209 7 0 chr10 48645462 48645769 -91670996 + AluJb SINE Alu 1 309 -3 1158 252 118 55 chr10 48645769 48646550 -91670215 + L1MEc LINE L1 2186 3003 -3212 331 160 138 19 chr10 48647074 48647204 -91669561 + MLT1G1 LTR MaLR 408 595 0 255 152 0 0 chr10 48647638 48647684 -91669081 + A-rich Low_complexity Low_complexity 1 46 0 727 268 82 32 chr10 48648344 48648795 -91667970 + MLT1H1 LTR MaLR 1 528 -2 2020 129 7 0 chr10 48649535 48649844 -91666921 + AluSp SINE Alu 1 311 -2 1608 152 8 11 chr10 48650239 48650503 -91666262 + MER57B LTR ERV1 1 263 -171 1030 153 25 35 chr10 48650516 48650718 -91666047 + MER57B LTR ERV1 235 434 0 1958 218 276 0 chr10 48650858 48651368 -91665397 + MER52A LTR ERV1 1 651 -1104 4213 172 36 22 chr10 48651380 48652120 -91664645 + MER52A LTR ERV1 1005 1755 0 4240 103 24 50 chr10 48652120 48652779 -91663986 + MER52A-int LTR ERV1 88 729 -6808 1304 209 70 0 chr10 48652777 48653036 -91663729 + MER52A-int LTR ERV1 1350 1626 -5911 * 1891 134 3 3 chr10 48653060 48653358 -91663407 + AluSp SINE Alu 1 298 -15 320 132 330 11 chr10 48653360 48653451 -91663314 + MER57B-int LTR ERV1 4349 4468 -3069 43341 57 3 2 chr10 48653451 48659630 -91657135 + L1PA3 LINE L1 1 6155 0 10133 127 30 32 chr10 48659630 48660070 -91656695 + MER57B-int LTR ERV1 4476 4915 -2622 2064 98 11 0 chr10 48660070 48660356 -91656409 - AluY SINE Alu -18 293 5 10133 127 30 32 chr10 48660356 48660669 -91656096 + MER57B-int LTR ERV1 4915 5227 -2310 1920 124 7 34 chr10 48660669 48660967 -91655798 + AluSx SINE Alu 1 290 -22 10133 127 30 32 chr10 48660967 48661928 -91654837 + MER57B-int LTR ERV1 5227 6188 -1349 976 154 37 6 chr10 48661920 48662082 -91654683 + MER57B-int LTR ERV1 6661 6827 -710 * 683 164 9 0 chr10 48663022 48663132 -91653633 + MER57B-int LTR ERV1 7032 7142 -395 2080 117 0 0 chr10 48663133 48663424 -91653341 - AluY SINE Alu -20 291 1 746 115 23 31 chr10 48663439 48663569 -91653196 + LTR54B LTR ERV1 3 131 -367 1391 135 131 0 chr10 48663569 48663798 -91652967 + MER57B-int LTR ERV1 7279 7537 0 2250 140 93 5 chr10 48663798 48664197 -91652568 + MER57B LTR ERV1 1 434 0 227 150 75 0 chr10 48664238 48664278 -91652487 + LTR6A LTR ERV1 1 43 -521 3792 119 7 11 chr10 48664278 48664841 -91651924 + LTR6A LTR ERV1 4 564 0 339 251 37 63 chr10 48666463 48666711 -91650054 + MLT1H LTR MaLR 311 549 0 2289 81 0 0 chr10 48668259 48668554 -91648211 - AluSg SINE Alu -15 295 1 1021 231 37 53 chr10 48669134 48669511 -91647254 + MER66A LTR ERV1 68 438 -40 185 259 35 35 chr10 48669841 48669899 -91646866 + MIR3 SINE MIR 100 157 -51 787 283 11 0 chr10 48670093 48670358 -91646407 - L1M4 LINE L1 -1746 4400 4133 2348 76 0 23 chr10 48670471 48670773 -91645992 + AluY SINE Alu 1 295 -16 4392 183 57 25 chr10 48670774 48671199 -91645566 + L1 LINE L1 2968 3378 -2768 2048 128 14 0 chr10 48671199 48671488 -91645277 + AluSx SINE Alu 1 293 -19 4392 183 57 25 chr10 48671488 48672578 -91644187 + L1 LINE L1 3378 4666 -1480 1110 100 0 0 chr10 48672581 48672761 -91644004 + (GAATG)n Satellite Satellite 1 180 0 437 138 0 37 chr10 48672775 48672884 -91643881 + (GAATG)n Satellite Satellite 2 106 0 1008 128 2 7 chr10 48672897 48673488 -91643277 + (GAATG)n Satellite Satellite 1 587 0 597 184 0 0 chr10 48673513 48673671 -91643094 + (GAATG)n Satellite Satellite 2 159 0 1032 128 0 14 chr10 48673692 48674067 -91642698 + (GAATG)n Satellite Satellite 1 369 0 1901 162 26 26 chr10 48674569 48674958 -91641807 + L1MA8 LINE L1 5897 6285 -6 1174 167 138 21 chr10 48676694 48676934 -91639831 - AluJo SINE Alu -44 268 1 3895 144 43 86 chr10 48676935 48677518 -91639247 - Tigger1 DNA MER2_type -237 2181 1643 1853 136 28 11 chr10 48677518 48677805 -91638960 - AluSg SINE Alu -18 292 1 3895 144 43 86 chr10 48677805 48678060 -91638705 - Tigger1 DNA MER2_type -775 1643 1379 1610 219 52 3 chr10 48679609 48679952 -91636813 + MSTA LTR MaLR 9 368 -60 1385 172 0 0 chr10 48679981 48680219 -91636546 + MSTA-int LTR MaLR 13 250 -1401 * 1401 163 8 12 chr10 48680216 48680468 -91636297 + MSTA-int LTR MaLR 1401 1651 0 992 260 11 42 chr10 48680468 48680778 -91635987 + MSTA LTR MaLR 1 282 -82 241 235 24 35 chr10 48680757 48680858 -91635907 - HSAT5 Satellite Satellite -1 99 1 * 375 205 0 12 chr10 48681088 48681187 -91635578 - HSAT5 Satellite Satellite -3 97 1 477 90 0 155 chr10 48681407 48681520 -91635245 - HSAT5 Satellite Satellite 0 95 1 258 180 10 160 chr10 48681536 48681636 -91635129 - HSAT5 Satellite Satellite -1 85 1 780 103 5 4 chr10 48681982 48686641 -91630124 + CER Satellite Satellite 1 4663 -6 774 197 7 0 chr10 48686632 48686769 -91629996 + MLT1A1 LTR MaLR 226 363 -2 * 3794 189 102 77 chr10 48686771 48688218 -91628547 + L1MCa LINE L1 723 2205 -4221 287 146 52 52 chr10 48688217 48688313 -91628452 + L1MCa LINE L1 2104 2199 -4227 * 1003 140 70 18 chr10 48688317 48688546 -91628219 + L1MCa LINE L1 2104 2344 -4082 1763 102 8 8 chr10 48688646 48688890 -91627875 + AluSq SINE Alu 32 275 -38 351 0 0 0 chr10 48688897 48688936 -91627829 + (CA)n Simple_repeat Simple_repeat 2 40 0 253 156 22 0 chr10 48688938 48688983 -91627782 + L1MA10 LINE L1 6270 6315 -19 2123 97 14 0 chr10 48688984 48689286 -91627479 - AluY SINE Alu 0 308 3 2110 133 3 0 chr10 48689290 48689583 -91627182 - AluSx SINE Alu -17 295 2 37 0 0 0 chr10 48689583 48689620 -91627145 + AT_rich Low_complexity Low_complexity 1 37 0 2185 110 0 38 chr10 48689745 48690062 -91626703 - AluSx SINE Alu -7 305 1 424 227 31 8 chr10 48690193 48690321 -91626444 + L1MCa LINE L1 3200 3330 -3096 241 203 34 0 chr10 48690324 48690383 -91626382 + L1MCa LINE L1 3270 3330 -3096 4024 235 182 44 chr10 48690386 48691470 -91625295 + L1MB4 LINE L1 2990 3924 -2222 1783 166 16 50 chr10 48691470 48691789 -91624976 + AluSq SINE Alu 1 308 -5 4024 235 182 44 chr10 48691789 48691854 -91624911 + L1MB4 LINE L1 3924 3979 -2167 2006 138 0 7 chr10 48691854 48692152 -91624613 + AluSx SINE Alu 1 296 -16 4024 235 182 44 chr10 48692152 48692957 -91623808 + L1MB4 LINE L1 3979 5232 -914 1179 158 110 0 chr10 48692957 48693166 -91623599 - MER46A DNA MER2_type -3 233 2 4024 235 182 44 chr10 48693166 48693223 -91623542 + L1MB4 LINE L1 5232 5280 -866 1228 217 188 25 chr10 48694259 48694685 -91622080 + L1MB4 LINE L1 5281 5636 -544 347 32 48 16 chr10 48694685 48694747 -91622018 + (TA)n Simple_repeat Simple_repeat 2 65 0 1228 217 188 25 chr10 48694747 48695070 -91621695 + L1MB4 LINE L1 5636 6174 -6 26 0 0 0 chr10 48695072 48695098 -91621667 + AT_rich Low_complexity Low_complexity 1 26 0 1667 175 7 17 chr10 48695102 48695393 -91621372 - AluJb SINE Alu -24 288 1 1112 242 119 48 chr10 48695393 48695504 -91621261 + L1MDa LINE L1 2367 2469 -4071 1772 177 10 3 chr10 48695504 48695803 -91620962 + AluJb SINE Alu 4 304 -8 1112 242 119 48 chr10 48695803 48696528 -91620237 + L1MDa LINE L1 2469 3276 -3264 1376 234 126 57 chr10 48696635 48696713 -91620052 + L1MEc LINE L1 2118 2189 -4026 1797 184 10 3 chr10 48696713 48697023 -91619742 + AluJb SINE Alu 1 312 0 1376 234 126 57 chr10 48697023 48697801 -91618964 + L1MEc LINE L1 2189 3003 -3212 313 240 182 68 chr10 48697827 48698332 -91618433 + MLT1F1 LTR MaLR 3 595 0 255 340 116 0 chr10 48698831 48698978 -91617787 + MLT1H1 LTR MaLR 3 166 -389 335 157 138 19 chr10 48699205 48699335 -91617430 + MLT1G1 LTR MaLR 408 595 0 180 179 0 0 chr10 48699764 48699803 -91616962 + A-rich Low_complexity Low_complexity 1 39 0 708 241 140 76 chr10 48700436 48700943 -91615822 + MLT1H1 LTR MaLR 1 541 -1 2186 117 10 0 chr10 48701668 48701975 -91614790 + AluSp SINE Alu 1 310 -3 2343 124 15 105 chr10 48702371 48702848 -91613917 + MER57B LTR ERV1 1 434 0 1779 225 278 0 chr10 48702987 48703502 -91613263 + MER52A LTR ERV1 1 658 -1097 4198 158 44 20 chr10 48703507 48704241 -91612524 + MER52A LTR ERV1 1005 1755 0 4117 130 36 36 chr10 48704241 48705157 -91611608 + MER52A-int LTR ERV1 88 1004 -4942 2140 124 3 3 chr10 48705185 48705492 -91611273 + AluSp SINE Alu 1 307 -6 6298 146 60 64 chr10 48705494 48706028 -91610737 + MER57B-int LTR ERV1 4349 4884 -2653 2168 108 10 0 chr10 48706028 48706324 -91610441 - AluY SINE Alu -12 299 1 6298 146 60 64 chr10 48706324 48706379 -91610386 + MER57B-int LTR ERV1 4884 4938 -2599 2047 136 3 0 chr10 48706379 48706665 -91610100 - AluSq SINE Alu -22 291 5 6298 146 60 64 chr10 48706665 48706966 -91609799 + MER57B-int LTR ERV1 4938 5239 -2298 2246 121 7 0 chr10 48706966 48707263 -91609502 + AluSx SINE Alu 1 299 -13 6298 146 60 64 chr10 48707263 48707805 -91608960 + MER57B-int LTR ERV1 5239 5777 -1760 6467 116 22 17 chr10 48707925 48707954 -91608811 + MER57B-int LTR ERV1 5200 5227 -2310 2317 110 7 0 chr10 48707954 48708253 -91608512 + AluSx SINE Alu 1 301 -11 6467 116 22 17 chr10 48708253 48709207 -91607558 + MER57B-int LTR ERV1 5227 6188 -1349 2470 136 59 10 chr10 48709199 48709605 -91607160 + MER57B-int LTR ERV1 6661 7086 -451 * 703 154 9 0 chr10 48709766 48709876 -91606889 + MER57B-int LTR ERV1 7032 7142 -395 2209 113 0 0 chr10 48709876 48710169 -91606596 - AluY SINE Alu -18 293 1 736 115 23 31 chr10 48710184 48710314 -91606451 + LTR54B LTR ERV1 3 131 -367 1396 135 131 0 chr10 48710314 48710543 -91606222 + MER57B-int LTR ERV1 7279 7537 0 2139 165 90 2 chr10 48710543 48710942 -91605823 + MER57B LTR ERV1 1 434 0 3682 131 5 9 chr10 48711026 48711589 -91605176 + LTR6A LTR ERV1 4 564 0 329 252 37 65 chr10 48713339 48713588 -91603177 + MLT1H LTR MaLR 311 549 0 2298 89 3 0 chr10 48715133 48715424 -91601341 - AluSg SINE Alu -18 292 1 1063 211 42 63 chr10 48716508 48716887 -91599878 + MER66A LTR ERV1 68 438 -40 826 279 53 0 chr10 48717427 48717749 -91599016 - L1M4 LINE L1 -1675 4471 4133 356 223 21 21 chr10 48717753 48717847 -91598918 - LTR45 LTR ERV1 0 525 432 2274 96 13 19 chr10 48717864 48718177 -91598588 + AluY SINE Alu 1 311 0 1783 226 90 7 chr10 48718179 48718603 -91598162 + L1 LINE L1 2964 3444 -2702 2224 117 13 0 chr10 48718603 48718911 -91597854 + AluSx SINE Alu 1 312 0 1783 226 90 7 chr10 48718911 48719031 -91597734 + L1 LINE L1 3444 3553 -2593 759 247 51 36 chr10 48719221 48719557 -91597208 + MER66A LTR ERV1 98 438 -40 851 271 56 0 chr10 48720097 48720418 -91596347 - L1M4 LINE L1 -1675 4471 4133 317 226 24 24 chr10 48720422 48720506 -91596259 - LTR45 LTR ERV1 0 525 442 2096 122 16 19 chr10 48720533 48720845 -91595920 + AluY SINE Alu 1 311 0 8082 183 29 24 chr10 48720848 48721271 -91595494 + L1MA3 LINE L1 2965 3384 -2921 2216 117 13 0 chr10 48721271 48721579 -91595186 + AluSx SINE Alu 1 312 0 8082 183 29 24 chr10 48721579 48722970 -91593795 + L1MA3 LINE L1 3384 4767 -1538 1811 108 8 11 chr10 48722970 48723230 -91593535 - AluY SINE Alu -17 294 36 8082 183 29 24 chr10 48723230 48723656 -91593109 + L1MA3 LINE L1 4767 5189 -1116 1464 215 55 3 chr10 48723656 48723949 -91592816 + AluJb SINE Alu 1 308 -4 8082 183 29 24 chr10 48723949 48724595 -91592170 + L1MA3 LINE L1 5189 6008 -297 3033 161 42 8 chr10 48724595 48725122 -91591643 - MER52A LTR ERV1 0 1755 1211 2164 130 63 5 chr10 48725898 48726293 -91590472 - LOR1-int LTR ERV1 -433 5696 4427 15006 105 12 2 chr10 48726307 48731520 -91585245 - L1PA7 LINE L1 -5 6464 1135 641 130 0 0 chr10 48731496 48731588 -91585177 - L1PA7 LINE L1 -6365 96 5 * 3891 180 42 94 chr10 48731591 48732376 -91584389 - LOR1-int LTR ERV1 -1013 5318 4494 1648 188 7 10 chr10 48732376 48732668 -91584097 - AluJb SINE Alu -20 292 2 3891 180 42 94 chr10 48732668 48733088 -91583677 - LOR1-int LTR ERV1 -1837 4494 4054 1990 153 7 0 chr10 48733088 48733382 -91583383 + AluSx SINE Alu 1 296 -16 3891 180 42 94 chr10 48733382 48733436 -91583329 - LOR1-int LTR ERV1 -2277 4054 3302 282 154 89 106 chr10 48733436 48733490 -91583275 - LOR1-int LTR ERV1 -1893 4705 4652 1702 201 3 0 chr10 48733490 48733794 -91582971 - AluJb SINE Alu -1 311 7 282 154 89 106 chr10 48733794 48733862 -91582903 - LOR1-int LTR ERV1 -1946 4652 4585 * 964 217 76 18 chr10 48733849 48734126 -91582639 - LOR1-int LTR ERV1 -2577 4021 3729 2632 199 74 70 chr10 48734382 48734971 -91581794 - LOR1-int LTR ERV1 -2478 3853 3268 2145 107 0 7 chr10 48734971 48735260 -91581505 - AluSq SINE Alu -24 289 3 2632 199 74 70 chr10 48735260 48735348 -91581417 - LOR1-int LTR ERV1 -3063 3268 3182 1400 193 74 4 chr10 48735348 48735618 -91581147 + AluJb SINE Alu 1 289 -23 2632 199 74 70 chr10 48735618 48736094 -91580671 - LOR1-int LTR ERV1 -3149 3182 1010 1748 164 3 50 chr10 48736104 48736421 -91580344 + AluJb SINE Alu 3 304 -8 760 207 56 47 chr10 48736448 48736661 -91580104 - LTR57-int LTR ERVL -4768 575 361 1949 174 0 0 chr10 48736661 48736965 -91579800 + AluSx SINE Alu 1 304 -8 205 245 0 20 chr10 48736965 48736982 -91579783 + (TG)n Simple_repeat Simple_repeat 2 18 -31 1968 128 7 3 chr10 48736982 48737270 -91579495 + AluSx SINE Alu 1 289 -23 205 245 0 20 chr10 48737270 48737301 -91579464 + (TG)n Simple_repeat Simple_repeat 18 49 0 1130 119 4 2 chr10 48738230 48739112 -91577653 - ACRO1 Satellite acromeric 0 883 1 581 206 0 0 chr10 48739349 48739605 -91577160 - ACRO1 Satellite acromeric 0 256 1 371 106 15 0 chr10 48740027 48740093 -91576672 + (TG)n Simple_repeat Simple_repeat 1 67 0 390 21 0 0 chr10 48740135 48740182 -91576583 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 243 237 118 0 chr10 48740598 48740674 -91576091 + MER5A DNA MER1_type 99 183 -6 1281 224 167 19 chr10 48740926 48741346 -91575419 + MER21B LTR ERV1 199 680 -183 291 171 0 0 chr10 48741464 48741540 -91575225 + G-rich Low_complexity Low_complexity 1 76 0 253 208 10 62 chr10 48741554 48741650 -91575115 + G-rich Low_complexity Low_complexity 5 95 0 761 107 5 2 chr10 48742023 48745238 -91571527 + CER Satellite Satellite 1 3223 -6 186 103 0 0 chr10 48745519 48745548 -91571217 + (TTTCG)n Simple_repeat Simple_repeat 2 30 0 1891 97 71 0 chr10 48745548 48745816 -91570949 - L1PA10 LINE L1 -19 6149 5863 253 186 0 0 chr10 48746214 48746257 -91570508 + Tigger5 DNA MER2_type 13 55 -2268 651 99 0 0 chr10 48746559 48746660 -91570105 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 765 205 37 118 chr10 48746713 48747035 -91569730 + L1MB8 LINE L1 5840 6135 -43 3768 203 12 70 chr10 48748757 48749787 -91566978 + L1P LINE L1 1432 2401 -3745 2433 184 127 11 chr10 48749788 48750347 -91566418 + MER57-int LTR ERV1 29 652 -5946 258 32 0 0 chr10 48750433 48750464 -91566301 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 22 35 0 0 chr10 48750489 48750518 -91566247 + AT_rich Low_complexity Low_complexity 1 29 0 280 91 0 45 chr10 48750525 48750569 -91566196 + LTR49 LTR ERV1 273 314 -281 623 199 43 31 chr10 48750616 48750777 -91565988 + MER57-int LTR ERV1 935 1097 -5501 6518 99 41 0 chr10 48750785 48751869 -91564896 - L1PA7 LINE L1 -2 6152 5051 3021 133 8 0 chr10 48751895 48752392 -91564373 + L1P LINE L1 4555 5055 -1091 1602 222 52 3 chr10 48754392 48754735 -91562030 + MSTA LTR MaLR 9 368 -60 1435 160 0 0 chr10 48754764 48755002 -91561763 + MSTA-int LTR MaLR 13 250 -1401 1363 171 8 12 chr10 48754999 48755251 -91561514 + MSTA-int LTR MaLR 1401 1651 0 * 963 265 7 39 chr10 48755251 48755534 -91561231 + MSTA LTR MaLR 1 274 -154 241 224 24 35 chr10 48755540 48755641 -91561124 - HSAT5 Satellite Satellite -1 99 1 359 205 0 12 chr10 48755871 48755970 -91560795 - HSAT5 Satellite Satellite -3 97 1 469 90 40 57 chr10 48756401 48756578 -91560187 + A-rich Low_complexity Low_complexity 3 176 0 317 290 71 49 chr10 48756586 48756810 -91559955 + L1M4 LINE L1 3073 3301 -2845 237 165 0 76 chr10 48756830 48756909 -91559856 + A-rich Low_complexity Low_complexity 1 73 0 900 240 96 24 chr10 48757295 48757621 -91559144 + MER57-int LTR ERV1 2486 2720 -2216 1724 190 7 3 chr10 48757621 48757931 -91558834 + AluJb SINE Alu 1 311 -1 900 240 96 24 chr10 48757931 48757983 -91558782 + MER57-int LTR ERV1 2720 2767 -2169 255 211 127 60 chr10 48757985 48758039 -91558726 + MER57-int LTR ERV1 4791 4840 -2697 2032 148 7 0 chr10 48758039 48758336 -91558429 - AluSx SINE Alu -13 299 1 255 211 127 60 chr10 48758336 48758447 -91558318 + MER57-int LTR ERV1 4840 4967 -2570 * 4023 169 34 98 chr10 48758437 48758756 -91558009 + MER57-int LTR ERV1 4283 4621 -1710 1636 191 7 10 chr10 48758756 48759050 -91557715 + AluJb SINE Alu 2 294 -18 4023 169 34 98 chr10 48759050 48759835 -91556930 + MER57-int LTR ERV1 4621 5317 -1014 641 130 0 0 chr10 48759839 48759931 -91556834 + L1P3 LINE L1 5 96 -6365 * 8866 140 24 11 chr10 48759907 48761421 -91555344 + L1P3 LINE L1 1135 2668 -3793 1428 193 58 7 chr10 48761530 48761805 -91554960 + AluJb SINE Alu 1 289 -23 2269 144 31 24 chr10 48761831 48762281 -91554484 - LTR49-int LTR ERV1 -6658 1462 1010 1764 161 3 50 chr10 48762291 48762608 -91554157 + AluJb SINE Alu 3 304 -8 951 181 38 118 chr10 48762635 48762847 -91553918 - LTR57-int LTR ERVL -4768 575 348 1930 178 0 0 chr10 48762847 48763150 -91553615 + AluSx SINE Alu 1 303 -9 951 181 38 118 chr10 48763150 48763167 -91553598 - LTR57-int LTR ERVL -4995 348 331 2152 128 0 0 chr10 48763167 48763456 -91553309 + AluSx SINE Alu 1 289 -23 411 21 0 0 chr10 48763456 48763504 -91553261 + (TG)n Simple_repeat Simple_repeat 1 48 0 951 181 38 118 chr10 48763504 48763560 -91553205 - LTR57-int LTR ERVL -5010 333 311 319 279 19 19 chr10 48763720 48763824 -91552941 - LTR49-int LTR ERV1 -3811 2520 2417 2058 130 13 0 chr10 48764216 48764517 -91552248 - AluSp SINE Alu -8 305 1 1764 86 0 0 chr10 48764633 48764853 -91551912 - AluY SINE Alu -91 220 1 2097 130 3 9 chr10 48764888 48765212 -91551553 - HERVK9 LTR ERVK -1012 4904 4583 1876 61 0 0 chr10 48765213 48765443 -91551322 - HERVK9 LTR ERVK -1976 3940 3711 19062 95 16 23 chr10 48765443 48767427 -91549338 - HERVK9 LTR ERVK -3130 2786 766 181 250 0 83 chr10 48767427 48767487 -91549278 - MER5B DNA MER1_type -69 109 55 19062 95 16 23 chr10 48767487 48768248 -91548517 - HERVK9 LTR ERVK -5150 766 1 2846 93 155 22 chr10 48768248 48768699 -91548066 - MER9 LTR ERVK 0 511 1 12646 96 2 2 chr10 48768699 48770383 -91546382 - HERVK14 LTR ERVK -4054 1891 205 606 119 20 0 chr10 48770377 48770478 -91546287 - HERVK14 LTR ERVK -5842 103 1 * 1798 71 14 2 chr10 48770478 48770758 -91546007 - LTR14A LTR ERVK 0 344 1 2855 229 43 12 chr10 48770763 48771098 -91545667 + L1 LINE L1 4060 4383 -1763 198 0 0 0 chr10 48771098 48771120 -91545645 + (GAAAA)n Simple_repeat Simple_repeat 2 23 0 2855 229 43 12 chr10 48771120 48771551 -91545214 + L1 LINE L1 4383 4850 -1296 897 293 70 10 chr10 48771558 48771872 -91544893 - LTR40a LTR ERVL -185 334 2 836 141 7 0 chr10 48772173 48772322 -91544443 - L1PB1 LINE L1 -2 6149 6000 247 116 23 0 chr10 48772736 48772779 -91543986 + MADE1 DNA Mariner 34 77 -3 1755 168 18 128 chr10 48773041 48773541 -91543224 + MER65A LTR ERV1 1 445 0 804 308 80 3 chr10 48774851 48775140 -91541625 - LTR16A LTR ERVL -8 442 132 2041 114 4 0 chr10 48775896 48776203 -91540562 - AluSc SINE Alu 0 315 8 243 119 24 24 chr10 48777402 48777444 -91539321 - MER5B DNA MER1_type -136 42 1 505 275 39 22 chr10 48778441 48778623 -91538142 - L1ME LINE L1 -2011 4069 3885 3359 143 47 11 chr10 48778641 48779262 -91537503 + L1MB1 LINE L1 5338 5980 -188 362 260 105 38 chr10 48779299 48780295 -91536470 - L1ME LINE L1 -2477 3603 2502 1266 294 111 37 chr10 48780331 48780601 -91536164 - L1ME LINE L1 -3875 2386 2137 2425 68 7 0 chr10 48780601 48780908 -91535857 - AluY SINE Alu -2 309 1 1266 294 111 37 chr10 48780908 48782525 -91534240 - L1ME LINE L1 -4124 2137 334 2040 43 16 0 chr10 48784801 48785056 -91531709 + L1PA4 LINE L1 5897 6155 0 26 0 0 0 chr10 48785206 48785232 -91531533 + AT_rich Low_complexity Low_complexity 1 26 0 1826 165 3 75 chr10 48786975 48787350 -91529415 - MER7A DNA MER2_type 0 346 1 192 40 0 0 chr10 48787843 48787868 -91528897 + (TG)n Simple_repeat Simple_repeat 2 26 0 1207 128 0 6 chr10 48788279 48788451 -91528314 - AluY SINE Alu -14 297 127 184 325 122 81 chr10 48789061 48789445 -91527320 + L2 LINE L2 2824 3223 -49 1051 173 53 4 chr10 48790087 48790312 -91526453 + L1MB3 LINE L1 5947 6182 -1 477 309 100 39 chr10 48790930 48791160 -91525605 - MIR SINE MIR -17 245 2 425 322 63 0 chr10 48791193 48791367 -91525398 + MIR SINE MIR 54 238 -24 225 373 112 12 chr10 48793076 48793237 -91523528 + L3 LINE CR1 186 362 -1215 267 319 97 7 chr10 48793708 48793848 -91522917 + MLT1L LTR MaLR 3 155 -460 288 306 108 25 chr10 48793848 48794208 -91522557 - MER20B DNA MER1_type 0 783 394 227 257 0 92 chr10 48794526 48794635 -91522130 + LTR33 LTR ERVL 415 513 -8 571 258 117 21 chr10 48794638 48794878 -91521887 - MER20B DNA MER1_type -402 381 119 234 287 11 23 chr10 48794912 48794999 -91521766 + MLT1L LTR MaLR 302 387 -228 2031 148 7 0 chr10 48795150 48795460 -91521305 - AluSx SINE Alu 0 312 1 1681 197 64 3 chr10 48795564 48795909 -91520856 - MER47A DNA MER2_type 0 366 1 182 232 29 0 chr10 48795909 48795978 -91520787 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 228 122 0 0 chr10 48795983 48796024 -91520741 + (TG)n Simple_repeat Simple_repeat 1 41 0 42272 53 4 2 chr10 48797157 48803293 -91513472 - L1PA4 LINE L1 -6 6149 1 22 0 0 0 chr10 48804322 48804344 -91512421 + AT_rich Low_complexity Low_complexity 1 22 0 3433 55 13 0 chr10 48804650 48805101 -91511664 + L1PA4 LINE L1 5697 6153 -2 252 300 0 0 chr10 48805307 48805367 -91511398 + MER117 DNA MER1_type 98 157 -40 1889 169 0 6 chr10 48806704 48807017 -91509748 + AluSx SINE Alu 1 311 -1 1743 159 0 4 chr10 48807190 48807460 -91509305 - AluSx SINE Alu -13 299 31 224 77 26 0 chr10 48810122 48810161 -91506604 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 671 26 0 0 chr10 48810161 48810237 -91506528 - L1HS LINE L1 -24 6131 6056 23 0 0 0 chr10 48810734 48810757 -91506008 + AT_rich Low_complexity Low_complexity 1 23 0 404 240 45 65 chr10 48810849 48811003 -91505762 + L2 LINE L2 619 769 -2545 1271 224 112 31 chr10 48811021 48811413 -91505352 - MER21B LTR ERV1 -58 805 382 485 256 16 16 chr10 48811432 48811561 -91505204 - MER21B LTR ERV1 -630 233 105 318 214 29 29 chr10 48811619 48811689 -91505076 - MER21B LTR ERV1 -774 89 20 1204 312 136 12 chr10 48811905 48812550 -91504215 + L2 LINE L2 811 1535 -1779 208 269 215 11 chr10 48812562 48812655 -91504110 - MIR SINE MIR -109 153 42 1969 128 4 14 chr10 48813465 48813792 -91502973 + AluSc SINE Alu 1 324 0 8127 60 4 6 chr10 48813824 48815589 -91501176 + L1PA4 LINE L1 4385 6155 0 25 51 0 0 chr10 48816470 48816509 -91500256 + AT_rich Low_complexity Low_complexity 1 39 0 21 57 0 0 chr10 48816623 48816658 -91500107 + AT_rich Low_complexity Low_complexity 1 35 0 398 237 116 97 chr10 48817268 48817406 -91499359 - LTR48B LTR ERV1 -13 631 497 185 0 40 0 chr10 48817406 48817431 -91499334 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 398 237 116 97 chr10 48817431 48817661 -91499104 - LTR48B LTR ERV1 -147 497 238 347 323 0 0 chr10 48817868 48817961 -91498804 - MER34 LTR ERV1 -449 93 1 844 120 0 8 chr10 48818854 48818979 -91497786 - HERVH LTR ERV1 -5405 2308 2185 10816 58 3 39 chr10 48818979 48820405 -91496360 + SVA Other Other 5 1378 -8 2375 79 3 0 chr10 48821478 48821769 -91494996 + AluY SINE Alu 1 292 -19 260 164 0 18 chr10 48821775 48821830 -91494935 - L1MB1 LINE L1 -15 6153 6100 11878 159 59 40 chr10 48821836 48822052 -91494713 - Tigger1 DNA MER2_type -4 2414 2203 1304 176 121 37 chr10 48822052 48822324 -91494441 - AluJo SINE Alu -7 295 1 11878 159 59 40 chr10 48822324 48822909 -91493856 - Tigger1 DNA MER2_type -215 2203 1630 1855 127 34 14 chr10 48822909 48823201 -91493564 - AluSg SINE Alu -12 298 1 11878 159 59 40 chr10 48823201 48824052 -91492713 - Tigger1 DNA MER2_type -788 1630 701 2322 100 0 10 chr10 48824052 48824362 -91492403 + AluSp SINE Alu 1 307 -6 11878 159 59 40 chr10 48824362 48825077 -91491688 - Tigger1 DNA MER2_type -1717 701 1 1627 163 48 19 chr10 48825077 48825451 -91491314 - L1MCa LINE L1 -3938 2488 2104 290 146 52 52 chr10 48825455 48825551 -91491214 - L1MCa LINE L1 -4227 2199 2104 * 3759 190 102 78 chr10 48825550 48826998 -91489767 - L1MCa LINE L1 -4221 2205 723 780 197 7 0 chr10 48827000 48827137 -91489628 - MLT1A1 LTR MaLR -2 363 226 * 802 95 3 4 chr10 48827128 48828670 -91488095 - CER Satellite Satellite 0 1541 1 1557 207 61 12 chr10 48829993 48830336 -91486429 + MSTA LTR MaLR 9 368 -60 1354 181 0 0 chr10 48830365 48830603 -91486162 + MSTA-int LTR MaLR 13 250 -1401 * 1382 167 8 12 chr10 48830600 48830852 -91485913 + MSTA-int LTR MaLR 1401 1651 0 909 265 21 39 chr10 48830852 48831131 -91485634 + MSTA LTR MaLR 1 274 -154 349 205 0 12 chr10 48831467 48831566 -91485199 - HSAT5 Satellite Satellite -3 97 1 516 70 0 155 chr10 48831786 48831899 -91484866 - HSAT5 Satellite Satellite 0 95 1 257 170 10 160 chr10 48831915 48832015 -91484750 - HSAT5 Satellite Satellite -1 85 1 794 105 5 3 chr10 48832361 48837161 -91479604 + CER Satellite Satellite 1 4806 -6 786 185 7 0 chr10 48837154 48837289 -91479476 + MLT1A1 LTR MaLR 228 363 -2 * 3797 188 104 76 chr10 48837291 48838734 -91478031 + L1MCa LINE L1 723 2205 -4221 299 146 52 52 chr10 48838733 48838829 -91477936 + L1MCa LINE L1 2104 2199 -4227 * 1667 161 54 19 chr10 48838833 48839205 -91477560 + L1MCa LINE L1 2104 2488 -3938 12298 154 61 33 chr10 48839205 48839908 -91476857 + Tigger1 DNA MER2_type 1 683 -1735 2251 101 10 10 chr10 48839908 48840214 -91476551 - AluSp SINE Alu -7 306 1 12298 154 61 33 chr10 48840214 48841072 -91475693 + Tigger1 DNA MER2_type 683 1516 -902 1826 150 27 10 chr10 48841072 48841372 -91475393 + AluSg SINE Alu 1 305 -5 12298 154 61 33 chr10 48841372 48841941 -91474824 + Tigger1 DNA MER2_type 1516 2205 -213 1294 184 127 22 chr10 48841941 48842208 -91474557 + AluJo SINE Alu 1 295 -7 12298 154 61 33 chr10 48842208 48842424 -91474341 + Tigger1 DNA MER2_type 2205 2414 -4 260 164 0 18 chr10 48842430 48842485 -91474280 + L1MB1 LINE L1 6100 6153 -15 2307 84 0 0 chr10 48842491 48842775 -91473990 - AluY SINE Alu -19 292 9 395 316 13 13 chr10 48842967 48843125 -91473640 + L1M4 LINE L1 4795 4952 -1194 1837 84 4 0 chr10 48843138 48843365 -91473400 + AluY SINE Alu 65 292 -19 260 164 0 18 chr10 48843371 48843426 -91473339 - L1MB1 LINE L1 -15 6153 6100 1049 157 134 9 chr10 48843432 48843648 -91473117 - Tigger1 DNA MER2_type -4 2414 2172 506 216 22 105 chr10 48843648 48843829 -91472936 - FRAM SINE Alu -17 159 1 1780 120 79 125 chr10 48843830 48844247 -91472518 - Tigger1 DNA MER2_type -243 2175 1778 702 261 53 25 chr10 48844351 48844673 -91472092 + MER66A LTR ERV1 108 438 -40 181 245 38 38 chr10 48845003 48845056 -91471709 + MIR SINE MIR 100 152 -56 828 279 11 0 chr10 48845255 48845520 -91471245 - L1M4 LINE L1 -1746 4400 4133 2294 73 7 20 chr10 48845633 48845934 -91470831 + AluY SINE Alu 1 297 -14 4132 184 13 22 chr10 48845935 48846362 -91470403 + L1MCa LINE L1 3248 3677 -2749 1987 135 14 0 chr10 48846362 48846650 -91470115 + AluSx SINE Alu 1 292 -20 4132 184 13 22 chr10 48846650 48847739 -91469026 + L1MCa LINE L1 3677 4944 -1482 975 117 0 14 chr10 48847739 48848022 -91468743 + (GAATG)n Satellite Satellite 1 278 0 868 124 0 27 chr10 48848038 48848223 -91468542 + (GAATG)n Satellite Satellite 1 180 0 1031 132 2 6 chr10 48848253 48848774 -91467991 + (GAATG)n Satellite Satellite 1 518 0 972 144 0 0 chr10 48848798 48849080 -91467685 + (GAATG)n Satellite Satellite 1 282 0 1155 118 0 10 chr10 48849100 48849591 -91467174 + (GAATG)n Satellite Satellite 1 485 0 1074 112 0 0 chr10 48849605 48849783 -91466982 + (GAATG)n Satellite Satellite 3 180 0 282 132 0 0 chr10 48849804 48849857 -91466908 + (GAATG)n Satellite Satellite 3 55 0 993 119 0 22 chr10 48849884 48850244 -91466521 + (GAATG)n Satellite Satellite 2 518 0 1146 132 0 0 chr10 48850279 48850586 -91466179 + (GAATG)n Satellite Satellite 1 307 0 1125 101 0 0 chr10 48850604 48850783 -91465982 + (GAATG)n Satellite Satellite 1 179 0 1080 112 0 9 chr10 48850848 48851212 -91465553 + (GAATG)n Satellite Satellite 1 540 0 883 125 5 5 chr10 48851230 48851462 -91465303 + (GAATG)n Satellite Satellite 1 232 0 1038 124 0 11 chr10 48851484 48851845 -91464920 + (GAATG)n Satellite Satellite 1 534 0 1022 112 6 0 chr10 48851872 48852050 -91464715 + (GAATG)n Satellite Satellite 2 180 0 702 130 0 0 chr10 48852069 48852200 -91464565 + (GAATG)n Satellite Satellite 2 132 0 939 134 0 0 chr10 48852216 48852395 -91464370 + (GAATG)n Satellite Satellite 2 180 0 333 117 0 0 chr10 48852414 48852474 -91464291 + (GAATG)n Satellite Satellite 3 62 0 914 119 0 27 chr10 48852486 48852671 -91464094 + (GAATG)n Satellite Satellite 1 180 0 990 131 2 10 chr10 48852840 48853128 -91463637 + (GAATG)n Satellite Satellite 1 454 0 903 135 0 0 chr10 48853128 48853298 -91463467 + (GAATG)n Satellite Satellite 3 172 0 771 155 0 0 chr10 48853588 48853762 -91463003 + (GAATG)n Satellite Satellite 2 175 0 246 148 0 0 chr10 48853783 48853837 -91462928 + (GAATG)n Satellite Satellite 2 55 0 1073 107 3 23 chr10 48853868 48854202 -91462563 + (GAATG)n Satellite Satellite 1 497 0 906 138 0 0 chr10 48854202 48854376 -91462389 + (GAATG)n Satellite Satellite 2 175 0 972 130 0 0 chr10 48854447 48854871 -91461894 + (GAATG)n Satellite Satellite 1 424 0 813 157 0 0 chr10 48854884 48855056 -91461709 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 48855084 48855261 -91461504 + (GAATG)n Satellite Satellite 2 178 0 830 156 0 18 chr10 48855281 48855552 -91461213 + (GAATG)n Satellite Satellite 1 266 0 984 133 0 0 chr10 48855572 48855752 -91461013 + (GAATG)n Satellite Satellite 1 180 0 719 148 0 27 chr10 48855779 48855962 -91460803 + (GAATG)n Satellite Satellite 1 178 0 953 105 6 0 chr10 48855978 48856140 -91460625 + (GAATG)n Satellite Satellite 2 164 0 858 144 0 0 chr10 48856161 48856341 -91460424 + (GAATG)n Satellite Satellite 1 180 0 1055 102 6 0 chr10 48856386 48856563 -91460202 + (GAATG)n Satellite Satellite 3 180 0 183 184 0 0 chr10 48856565 48856603 -91460162 + (CAGAA)n Simple_repeat Simple_repeat 3 40 0 918 85 5 58 chr10 48856620 48856808 -91459957 + (GAATG)n Satellite Satellite 3 180 0 972 129 4 0 chr10 48856820 48857097 -91459668 + (GAATG)n Satellite Satellite 1 278 0 792 149 0 0 chr10 48857138 48857312 -91459453 + (GAATG)n Satellite Satellite 2 175 0 963 152 0 0 chr10 48857333 48857642 -91459123 + (GAATG)n Satellite Satellite 1 309 0 845 90 11 53 chr10 48857658 48857846 -91458919 + (GAATG)n Satellite Satellite 1 180 0 1044 122 0 2 chr10 48857897 48858215 -91458550 + (GAATG)n Satellite Satellite 1 497 0 855 156 0 0 chr10 48858236 48858415 -91458350 + (GAATG)n Satellite Satellite 2 180 0 843 111 11 33 chr10 48858448 48858628 -91458137 + (GAATG)n Satellite Satellite 3 178 0 873 149 0 0 chr10 48858660 48858889 -91457876 + (GAATG)n Satellite Satellite 1 229 0 1254 122 0 0 chr10 48858906 48859386 -91457379 + (GAATG)n Satellite Satellite 1 480 0 859 122 0 26 chr10 48859415 48859849 -91456916 + (GAATG)n Satellite Satellite 1 422 0 842 153 6 0 chr10 48859876 48860053 -91456712 + (GAATG)n Satellite Satellite 2 179 0 999 134 0 14 chr10 48860065 48860464 -91456301 + (GAATG)n Satellite Satellite 2 554 0 1083 116 0 23 chr10 48860484 48860849 -91455916 + (GAATG)n Satellite Satellite 3 526 0 953 105 6 0 chr10 48860865 48861027 -91455738 + (GAATG)n Satellite Satellite 2 164 0 1055 131 3 5 chr10 48861048 48861496 -91455269 + (GAATG)n Satellite Satellite 3 624 0 918 85 5 58 chr10 48861512 48861700 -91455065 + (GAATG)n Satellite Satellite 3 180 0 243 61 0 0 chr10 48861712 48861745 -91455020 + (GAATG)n Satellite Satellite 3 35 0 868 101 0 53 chr10 48861771 48861960 -91454805 + (GAATG)n Satellite Satellite 2 180 0 792 181 0 0 chr10 48861987 48862415 -91454350 + (GAATG)n Satellite Satellite 1 428 0 246 148 0 0 chr10 48862436 48862490 -91454275 + (GAATG)n Satellite Satellite 2 55 0 1073 106 3 23 chr10 48862521 48862855 -91453910 + (GAATG)n Satellite Satellite 1 497 0 927 132 0 0 chr10 48862855 48863029 -91453736 + (GAATG)n Satellite Satellite 2 175 0 993 127 0 0 chr10 48863100 48863524 -91453241 + (GAATG)n Satellite Satellite 1 424 0 792 163 0 0 chr10 48863537 48863709 -91453056 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 48863737 48863914 -91452851 + (GAATG)n Satellite Satellite 2 178 0 757 157 6 6 chr10 48863935 48864113 -91452652 + (GAATG)n Satellite Satellite 3 180 0 1020 141 0 0 chr10 48864150 48864584 -91452181 + (GAATG)n Satellite Satellite 1 434 0 1264 120 1 4 chr10 48864604 48865402 -91451363 + (GAATG)n Satellite Satellite 1 795 0 963 142 3 4 chr10 48865431 48866185 -91450580 + (GAATG)n Satellite Satellite 1 752 0 312 111 0 0 chr10 48866211 48866265 -91450500 + (GAATG)n Satellite Satellite 2 55 0 936 144 0 0 chr10 48866277 48866605 -91450160 + (GAATG)n Satellite Satellite 1 328 0 999 123 0 0 chr10 48866626 48866879 -91449886 + (GAATG)n Satellite Satellite 1 253 0 843 151 0 0 chr10 48866901 48867166 -91449599 + (GAATG)n Satellite Satellite 1 265 0 748 117 0 48 chr10 48867185 48867373 -91449392 + (GAATG)n Satellite Satellite 2 180 0 1089 121 0 0 chr10 48867394 48867648 -91449117 + (GAATG)n Satellite Satellite 1 254 0 1184 99 4 2 chr10 48867665 48868057 -91448708 + (GAATG)n Satellite Satellite 1 572 0 750 135 5 32 chr10 48868073 48868258 -91448507 + (GAATG)n Satellite Satellite 1 180 0 1167 109 0 0 chr10 48868293 48868657 -91448108 + (GAATG)n Satellite Satellite 1 364 0 951 154 0 1 chr10 48868673 48869390 -91447375 + (GAATG)n Satellite Satellite 3 889 0 1008 129 3 0 chr10 48869402 48869715 -91447050 + (GAATG)n Satellite Satellite 1 314 0 1131 94 0 0 chr10 48869731 48869911 -91446854 + (GAATG)n Satellite Satellite 1 180 0 213 167 0 0 chr10 48869941 48869995 -91446770 + (GAATG)n Satellite Satellite 2 55 0 847 106 0 53 chr10 48870012 48870201 -91446564 + (GAATG)n Satellite Satellite 1 179 0 870 157 0 0 chr10 48870243 48870421 -91446344 + (GAATG)n Satellite Satellite 1 178 0 975 137 0 6 chr10 48870444 48870740 -91446025 + (GAATG)n Satellite Satellite 1 471 0 888 100 0 53 chr10 48870756 48870946 -91445819 + (GAATG)n Satellite Satellite 1 180 0 954 130 0 0 chr10 48870983 48871160 -91445605 + (GAATG)n Satellite Satellite 2 178 0 909 138 0 0 chr10 48871178 48871410 -91445355 + (GAATG)n Satellite Satellite 1 232 0 882 153 2 0 chr10 48871427 48872030 -91444735 + (GAATG)n Satellite Satellite 1 604 0 1110 137 0 3 chr10 48872055 48872577 -91444188 + (GAATG)n Satellite Satellite 2 683 0 792 149 0 0 chr10 48872618 48872792 -91443973 + (GAATG)n Satellite Satellite 2 175 0 246 148 0 0 chr10 48872813 48872867 -91443898 + (GAATG)n Satellite Satellite 2 55 0 1055 116 2 9 chr10 48872884 48873536 -91443229 + (GAATG)n Satellite Satellite 3 823 0 993 130 0 0 chr10 48873552 48873911 -91442854 + (GAATG)n Satellite Satellite 1 359 0 792 163 0 0 chr10 48873924 48874096 -91442669 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 48874124 48874301 -91442464 + (GAATG)n Satellite Satellite 2 178 0 656 173 0 27 chr10 48874322 48874507 -91442258 + (GAATG)n Satellite Satellite 1 180 0 1038 133 0 2 chr10 48874522 48874951 -91441814 + (GAATG)n Satellite Satellite 1 607 0 1234 92 3 6 chr10 48874968 48875336 -91441429 + (GAATG)n Satellite Satellite 1 366 0 884 130 0 27 chr10 48875466 48875651 -91441114 + (GAATG)n Satellite Satellite 1 180 0 1080 120 1 9 chr10 48875679 48876184 -91440581 + (GAATG)n Satellite Satellite 1 679 0 873 133 0 0 chr10 48876201 48876359 -91440406 + (GAATG)n Satellite Satellite 2 159 0 1074 139 0 0 chr10 48876379 48876661 -91440104 + (GAATG)n Satellite Satellite 1 282 0 1083 104 0 0 chr10 48876679 48876852 -91439913 + (GAATG)n Satellite Satellite 3 175 0 927 145 0 10 chr10 48876909 48877237 -91439528 + (GAATG)n Satellite Satellite 1 503 0 1056 106 0 0 chr10 48877253 48877432 -91439333 + (GAATG)n Satellite Satellite 2 180 0 743 154 4 0 chr10 48877443 48877677 -91439088 + (GAATG)n Satellite Satellite 1 235 0 993 138 0 9 chr10 48877702 48878037 -91438728 + (GAATG)n Satellite Satellite 1 508 0 972 124 0 0 chr10 48878037 48878215 -91438550 + (GAATG)n Satellite Satellite 3 180 0 981 131 0 4 chr10 48878283 48878610 -91438155 + (GAATG)n Satellite Satellite 2 498 0 1011 158 1 0 chr10 48878621 48879309 -91437456 + (GAATG)n Satellite Satellite 1 689 0 642 179 0 0 chr10 48879321 48879489 -91437276 + (GAATG)n Satellite Satellite 2 169 0 993 118 0 0 chr10 48879520 48879698 -91437067 + (GAATG)n Satellite Satellite 3 180 0 969 143 0 7 chr10 48879729 48880036 -91436729 + (GAATG)n Satellite Satellite 1 481 0 930 135 0 0 chr10 48880036 48880214 -91436551 + (GAATG)n Satellite Satellite 2 179 0 1092 111 0 0 chr10 48880225 48880405 -91436360 + (GAATG)n Satellite Satellite 1 180 0 692 132 11 33 chr10 48880464 48880646 -91436119 + (GAATG)n Satellite Satellite 3 180 0 870 141 0 0 chr10 48880662 48880832 -91435933 + (GAATG)n Satellite Satellite 2 171 0 1097 85 0 9 chr10 48880845 48881078 -91435687 + (GAATG)n Satellite Satellite 1 230 0 1023 118 0 14 chr10 48881110 48881483 -91435282 + (GAATG)n Satellite Satellite 1 367 0 258 148 0 0 chr10 48881504 48881558 -91435207 + (GAATG)n Satellite Satellite 2 55 0 1113 112 3 0 chr10 48881574 48881922 -91434843 + (GAATG)n Satellite Satellite 1 349 0 1061 124 6 0 chr10 48881952 48882304 -91434461 + (GAATG)n Satellite Satellite 1 354 0 875 135 0 27 chr10 48882315 48882500 -91434265 + (GAATG)n Satellite Satellite 1 180 0 183 42 0 0 chr10 48882515 48882539 -91434226 + (GAATG)n Satellite Satellite 2 25 0 801 168 0 0 chr10 48882555 48882734 -91434031 + (GAATG)n Satellite Satellite 2 180 0 954 150 0 0 chr10 48882753 48883053 -91433712 + (GAATG)n Satellite Satellite 1 300 0 1000 107 5 20 chr10 48883090 48883538 -91433227 + (GAATG)n Satellite Satellite 1 618 0 1074 94 0 0 chr10 48883558 48883728 -91433037 + (GAATG)n Satellite Satellite 2 171 0 1080 111 0 0 chr10 48883739 48883919 -91432846 + (GAATG)n Satellite Satellite 1 180 0 837 145 0 0 chr10 48883954 48884133 -91432632 + (GAATG)n Satellite Satellite 2 180 0 1023 129 0 0 chr10 48884151 48884329 -91432436 + (GAATG)n Satellite Satellite 1 178 0 990 129 0 26 chr10 48884353 48884727 -91432038 + (GAATG)n Satellite Satellite 1 540 0 990 129 0 0 chr10 48884748 48884996 -91431769 + (GAATG)n Satellite Satellite 1 248 0 1036 131 0 23 chr10 48885013 48885709 -91431056 + (GAATG)n Satellite Satellite 3 860 0 1113 146 0 1 chr10 48885720 48886418 -91430347 + (GAATG)n Satellite Satellite 1 877 0 1032 136 1 0 chr10 48886438 48887185 -91429580 + (GAATG)n Satellite Satellite 1 748 0 1002 128 0 10 chr10 48887222 48887664 -91429101 + (GAATG)n Satellite Satellite 1 611 0 987 119 0 0 chr10 48887664 48887840 -91428925 + (GAATG)n Satellite Satellite 3 178 0 936 152 2 0 chr10 48887918 48888410 -91428355 + (GAATG)n Satellite Satellite 1 493 0 717 168 0 0 chr10 48888421 48888600 -91428165 + (GAATG)n Satellite Satellite 2 180 0 840 136 0 0 chr10 48888795 48888957 -91427808 + (GAATG)n Satellite Satellite 2 163 0 1020 134 0 2 chr10 48888974 48889497 -91427268 + (GAATG)n Satellite Satellite 1 521 0 866 147 1 10 chr10 48889543 48890279 -91426486 + (GAATG)n Satellite Satellite 1 729 0 984 140 0 4 chr10 48890309 48890842 -91425923 + (GAATG)n Satellite Satellite 3 708 0 1067 120 4 6 chr10 48890854 48891206 -91425559 + (GAATG)n Satellite Satellite 2 522 0 984 145 3 6 chr10 48891239 48891488 -91425277 + (GAATG)n Satellite Satellite 1 427 0 902 111 11 11 chr10 48891488 48891668 -91425097 + (GAATG)n Satellite Satellite 1 180 0 811 106 0 53 chr10 48891971 48892160 -91424605 + (GAATG)n Satellite Satellite 2 180 0 246 148 0 0 chr10 48892181 48892235 -91424530 + (GAATG)n Satellite Satellite 2 55 0 1040 119 4 2 chr10 48892252 48892610 -91424155 + (GAATG)n Satellite Satellite 1 539 0 993 131 0 0 chr10 48892623 48892799 -91423966 + (GAATG)n Satellite Satellite 2 177 0 300 53 0 0 chr10 48892831 48892869 -91423896 + (GAATG)n Satellite Satellite 2 39 0 969 143 0 11 chr10 48892890 48893255 -91423510 + (GAATG)n Satellite Satellite 1 540 0 785 246 212 10 chr10 48893457 48893848 -91422917 + L1M4 LINE L1 2465 2934 -3212 380 271 153 57 chr10 48893874 48894379 -91422386 + MLT1H1 LTR MaLR 3 555 0 246 156 0 0 chr10 48894814 48894859 -91421906 + A-rich Low_complexity Low_complexity 1 45 0 692 266 94 45 chr10 48895518 48895969 -91420796 + MLT1H1 LTR MaLR 1 528 -2 2071 123 7 10 chr10 48896709 48897018 -91419747 + AluSp SINE Alu 1 308 -5 1610 165 11 76 chr10 48897414 48897891 -91418874 + MER57B LTR ERV1 1 403 0 1780 222 276 0 chr10 48898031 48898541 -91418224 + MER52A LTR ERV1 1 651 -1104 4160 170 36 22 chr10 48898553 48899293 -91417472 + MER52A LTR ERV1 1005 1755 0 4181 108 24 50 chr10 48899293 48899952 -91416813 + MER52A-int LTR ERV1 88 729 -6808 1329 199 68 0 chr10 48899950 48900201 -91416564 + MER52A-int LTR ERV1 1350 1617 -5920 * 1945 138 3 3 chr10 48900232 48900530 -91416235 + AluSp SINE Alu 1 298 -15 308 132 330 11 chr10 48900532 48900623 -91416142 + MER83B-int LTR ERV1 3297 3353 -1527 43277 57 3 2 chr10 48900623 48906325 -91410440 + L1P2 LINE L1 1 5705 -450 2291 95 0 0 chr10 48906694 48906988 -91409777 - AluSg SINE Alu -16 294 1 1458 229 0 23 chr10 49108009 49108315 -91208450 - AluSp SINE Alu -8 305 7 620 75 0 0 chr10 49109735 49109815 -91206950 + MADE1 DNA Mariner 1 80 0 2649 97 0 8 chr10 49110137 49110529 -91206236 - LTR7 LTR ERV1 -2 448 60 22 0 0 0 chr10 49110601 49110623 -91206142 + AT_rich Low_complexity Low_complexity 1 22 0 207 100 0 0 chr10 49110993 49111023 -91205742 + (TA)n Simple_repeat Simple_repeat 1 30 0 321 242 11 33 chr10 49111023 49111114 -91205651 + L1MC4 LINE L1 6612 6700 -1342 1906 94 0 29 chr10 49111114 49111389 -91205376 - AluY SINE Alu -7 304 38 301 250 73 0 chr10 49111402 49111498 -91205267 - L1M4 LINE L1 -3670 2476 2374 5720 241 128 21 chr10 49111608 49111937 -91204828 - L1MD3 LINE L1 -8 7987 7695 2125 128 35 41 chr10 49111937 49112303 -91204462 + THE1B LTR MaLR 1 364 0 5720 241 128 21 chr10 49112303 49114089 -91202676 - L1MD3 LINE L1 -300 7695 5645 445 145 170 107 chr10 49114089 49114248 -91202517 - MLT2D LTR ERVL 0 414 246 844 170 0 0 chr10 49114248 49114389 -91202376 - ERVL LTR ERVL -1137 4627 4487 660 190 6 84 chr10 49114414 49114468 -91202297 - MLT2D LTR ERVL -2 412 355 2208 74 3 0 chr10 49114468 49114775 -91201990 - AluY SINE Alu 0 308 1 660 190 6 84 chr10 49114775 49114898 -91201867 - MLT2D LTR ERVL -59 355 248 6266 76 10 6 chr10 49115125 49116019 -91200746 + L1MA1 LINE L1 5400 6297 -5 1397 143 0 5 chr10 49116044 49116267 -91200498 + MLT1D LTR MaLR 284 505 0 207 176 0 0 chr10 49116597 49116631 -91200134 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 183 80 0 0 chr10 49116637 49116662 -91200103 + (A)n Simple_repeat Simple_repeat 1 25 0 1131 318 35 28 chr10 49117064 49117605 -91199160 + MLT1K LTR MaLR 13 557 -31 318 254 36 34 chr10 49118427 49118563 -91198202 - L1ME3 LINE L1 0 6162 6021 2148 93 0 0 chr10 49118572 49118884 -91197881 - AluSx SINE Alu 0 326 15 554 94 0 12 chr10 49119308 49119393 -91197372 + LTR23 LTR ERV1 320 403 -34 301 341 45 8 chr10 49119415 49119547 -91197218 + MIR SINE MIR 61 197 -65 215 288 51 0 chr10 49119915 49119974 -91196791 - MIR3 SINE MIR -139 69 8 404 291 60 33 chr10 49121142 49121324 -91195441 - MIR SINE MIR -62 200 14 2245 121 3 0 chr10 49121454 49121761 -91195004 + AluSx SINE Alu 1 308 -4 507 310 32 19 chr10 49121762 49121920 -91194845 + MIR SINE MIR 25 184 -78 553 271 164 0 chr10 49121965 49122172 -91194593 - MIR SINE MIR -2 260 20 360 210 37 126 chr10 49122194 49122408 -91194357 - MER112 DNA MER1_type -31 229 35 405 338 63 0 chr10 49122651 49122793 -91193972 - L2 LINE L2 -6 3266 3116 191 361 41 57 chr10 49122932 49123126 -91193639 - L2 LINE L2 -228 3044 2854 222 328 15 0 chr10 49123463 49123530 -91193235 + MIR SINE MIR 78 145 -63 958 194 12 0 chr10 49123534 49123747 -91193018 + FAM SINE Alu 1 79 0 256 260 146 0 chr10 49123750 49123846 -91192919 + MIR SINE MIR 137 246 -16 2088 130 10 0 chr10 49125045 49125346 -91191419 - AluSx SINE Alu -8 304 1 767 278 90 24 chr10 49125346 49125681 -91191084 - MLT1K LTR MaLR -6 582 226 259 239 15 15 chr10 49125677 49125744 -91191021 - MLT1K LTR MaLR -496 92 26 * 204 40 0 0 chr10 49126119 49126144 -91190621 + (TG)n Simple_repeat Simple_repeat 2 26 0 1948 136 7 0 chr10 49127545 49127853 -91188912 + AluSx SINE Alu 1 310 0 528 299 92 18 chr10 49127855 49128072 -91188693 + MIR SINE MIR 28 260 -2 212 122 82 0 chr10 49128259 49128308 -91188457 + A-rich Low_complexity Low_complexity 3 55 0 1091 161 0 6 chr10 49128472 49128640 -91188125 + FRAM SINE Alu 1 166 -10 2142 106 0 3 chr10 49130553 49130836 -91185929 - AluSc SINE Alu -27 282 1 746 264 54 0 chr10 49132338 49132505 -91184260 + MER45A DNA AcHobo 3 178 0 1019 238 47 59 chr10 49132973 49133313 -91183452 - MLT1H LTR MaLR -213 336 1 326 262 84 9 chr10 49133365 49133472 -91183293 + MIR3 SINE MIR 79 193 -15 2534 77 0 13 chr10 49134446 49134759 -91182006 - AluSc SINE Alu 0 309 1 22 35 0 0 chr10 49135409 49135438 -91181327 + AT_rich Low_complexity Low_complexity 1 29 0 490 183 200 17 chr10 49136238 49136358 -91180407 + MER5A DNA MER1_type 48 189 0 307 261 171 11 chr10 49136710 49136886 -91179879 - MIR SINE MIR -7 255 52 1063 95 16 42 chr10 49136900 49137089 -91179676 - L1MB2 LINE L1 -1 6170 5987 235 298 135 10 chr10 49138094 49138198 -91178567 + MIR3 SINE MIR 38 154 -54 503 261 30 0 chr10 49138314 49138448 -91178317 + MER58A DNA MER1_type 12 149 0 288 149 0 196 chr10 49138708 49138876 -91177889 + Alu SINE Alu 225 300 0 614 137 0 0 chr10 49138890 49138985 -91177780 - MLT2D LTR ERVL -319 95 1 1321 249 48 19 chr10 49138985 49139666 -91177099 - L1ME LINE L1 -520 5646 4941 291 97 2 0 chr10 49139700 49139750 -91177015 + MSTA LTR MaLR 259 318 -114 1805 214 60 11 chr10 49139847 49140395 -91176370 - L1M4 LINE L1 -813 5333 4759 183 318 32 16 chr10 49140717 49140780 -91175985 - MER5B DNA MER1_type -20 158 95 21 0 0 0 chr10 49140951 49140972 -91175793 + AT_rich Low_complexity Low_complexity 1 21 0 663 275 110 4 chr10 49141096 49141463 -91175302 - LTR16C LTR ERVL -9 482 37 1241 300 91 5 chr10 49141579 49142019 -91174746 - L2 LINE L2 -7 3306 2829 194 333 28 0 chr10 49142076 49142148 -91174617 - L2 LINE L2 -649 2665 2592 452 261 82 23 chr10 49143222 49143374 -91173391 + MIR SINE MIR 7 163 -65 2270 65 0 14 chr10 49144673 49144966 -91171799 - AluY SINE Alu -16 295 7 2081 117 3 19 chr10 49146109 49146418 -91170347 - AluSx SINE Alu -8 304 1 1973 143 3 17 chr10 49146427 49146727 -91170038 - AluSx SINE Alu -16 296 1 559 317 139 4 chr10 49146920 49147150 -91169615 + MIR SINE MIR 2 262 0 698 263 67 42 chr10 49147319 49147676 -91169089 + L1ME LINE L1 5378 5743 -378 465 147 9 26 chr10 49149868 49149984 -91166781 + CT-rich Low_complexity Low_complexity 3 116 0 253 226 0 0 chr10 49151146 49151199 -91165566 - L2 LINE L2 -2 3270 3218 1657 303 91 43 chr10 49151411 49152444 -91164321 - HERV16 LTR ERVL -3601 1395 313 341 257 9 111 chr10 49152508 49152586 -91164179 - MLT1G LTR MaLR -7 583 499 2056 138 10 0 chr10 49152586 49152875 -91163890 - AluSx SINE Alu -17 295 4 341 257 9 111 chr10 49152875 49153022 -91163743 - MLT1G LTR MaLR -91 499 381 1112 180 15 0 chr10 49153042 49153242 -91163523 + MER20 DNA MER1_type 17 219 0 458 196 226 8 chr10 49153242 49153375 -91163390 - MLT1G LTR MaLR -207 383 222 627 240 34 11 chr10 49153511 49153686 -91163079 - MLT1G LTR MaLR -411 179 1 580 314 30 4 chr10 49153687 49153923 -91162842 - HERV16 LTR ERVL -4753 243 2 780 317 56 42 chr10 49153924 49154353 -91162412 - LTR16A LTR ERVL 0 450 16 508 219 139 0 chr10 49155080 49155231 -91161534 - MER96 DNA MER1_type? 0 175 4 1019 179 6 0 chr10 49155467 49155629 -91161136 - AluJo/FRAM SINE Alu -4 308 146 466 289 0 53 chr10 49155629 49155816 -91160949 - AluJb SINE Alu -133 179 3 225 360 0 0 chr10 49156805 49156880 -91159885 + MIR SINE MIR 21 95 -167 2300 112 0 0 chr10 49156894 49157199 -91159566 - AluSx SINE Alu -7 305 1 6143 231 18 9 chr10 49157249 49159312 -91157453 - L1PA12 LINE L1 -5512 2069 1 262 222 61 15 chr10 49159491 49159571 -91157194 - MIR3 SINE MIR -46 162 76 561 274 98 10 chr10 49159727 49160033 -91156732 + L1MEd LINE L1 903 1235 -4884 355 261 231 15 chr10 49160078 49160273 -91156492 + L1MEd LINE L1 1349 1585 -4725 805 167 88 15 chr10 49160288 49160492 -91156273 - Charlie4 DNA MER1_type -3 1958 1740 2327 160 18 61 chr10 49161099 49161544 -91155221 - MSTB LTR MaLR 0 426 1 1811 171 10 23 chr10 49162227 49162536 -91154229 + AluJo SINE Alu 1 305 -7 2389 121 47 10 chr10 49163127 49163532 -91153233 - MSTA LTR MaLR -8 420 1 1659 260 51 101 chr10 49164263 49165048 -91151717 + L2 LINE L2 2148 2893 -421 192 40 0 0 chr10 49167524 49167549 -91149216 + (G)n Simple_repeat Simple_repeat 1 25 0 236 28 56 0 chr10 49167578 49167614 -91149151 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 25 51 0 0 chr10 49168220 49168259 -91148506 + AT_rich Low_complexity Low_complexity 1 39 0 237 132 0 0 chr10 49170382 49170420 -91146345 + (GAA)n Simple_repeat Simple_repeat 3 40 0 383 83 17 0 chr10 49170735 49170795 -91145970 + (GA)n Simple_repeat Simple_repeat 2 62 0 345 259 115 35 chr10 49172539 49172697 -91144068 + MIR SINE MIR 19 188 -74 639 171 21 71 chr10 49172761 49172901 -91143864 + FLAM_C SINE Alu 1 133 0 246 333 111 0 chr10 49172937 49173045 -91143720 + L3 LINE CR1 1455 1574 -3 317 314 138 11 chr10 49173125 49173313 -91143452 - MIR SINE MIR -48 214 3 300 268 22 120 chr10 49174678 49174861 -91141904 - MER102b DNA MER1_type 0 341 177 1042 176 16 5 chr10 49174899 49175086 -91141679 + MLT1A1 LTR MaLR 1 189 -176 590 271 54 73 chr10 49175089 49175499 -91141266 - L2 LINE L2 -107 3206 2805 1256 114 0 10 chr10 49175518 49175711 -91141054 + MLT2A1 LTR ERVL 1 191 -253 207 0 0 0 chr10 49175835 49175858 -91140907 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 221 333 158 17 chr10 49177575 49177752 -91139013 + MIR SINE MIR 47 248 -14 266 337 37 43 chr10 49177856 49178019 -91138746 - L3 LINE CR1 -11 1566 1405 359 238 80 60 chr10 49178061 49178212 -91138553 - MIR SINE MIR -42 220 67 344 284 11 11 chr10 49178581 49178669 -91138096 + L2 LINE L2 3184 3271 -1 359 330 155 17 chr10 49180025 49180264 -91136501 + L1MA5 LINE L1 493 764 -6445 12953 187 33 16 chr10 49180338 49181080 -91135685 + L1MA5 LINE L1 1717 2445 -4917 3584 109 4 4 chr10 49181080 49181594 -91135171 + MER75 DNA T2_type 1 514 0 12953 187 33 16 chr10 49181594 49186398 -91130367 + L1MA5 LINE L1 2445 7362 0 195 42 0 0 chr10 49186447 49186471 -91130294 + (A)n Simple_repeat Simple_repeat 1 24 0 265 191 21 0 chr10 49186887 49186934 -91129831 + MER5B DNA MER1_type 2 49 -129 3528 204 109 83 chr10 49187042 49187625 -91129140 - L1MC3 LINE L1 -7 7778 7211 271 250 11 65 chr10 49187625 49187717 -91129048 - MLT1F1 LTR MaLR -445 122 36 3528 204 109 83 chr10 49187717 49188433 -91128332 - L1MC3 LINE L1 -574 7211 6353 440 282 32 8 chr10 49188433 49188557 -91128208 + MER5B DNA MER1_type 52 178 0 282 113 32 16 chr10 49189312 49189374 -91127391 + CT-rich Low_complexity Low_complexity 2 64 0 254 268 65 22 chr10 49189442 49189580 -91127185 - HAL1b LINE L1 -457 891 748 377 327 83 6 chr10 49189580 49189736 -91127029 - HAL1 LINE L1 -1558 949 782 298 276 168 88 chr10 49190358 49190698 -91126067 + L2 LINE L2 2945 3311 -2 1932 155 0 22 chr10 49191336 49191652 -91125113 - AluJb SINE Alu -3 309 1 400 281 79 24 chr10 49192216 49192831 -91123934 + L1ME LINE L1 5009 5651 -513 206 290 86 21 chr10 49192836 49192929 -91123836 + MER5B DNA MER1_type 1 99 -79 948 225 178 17 chr10 49192996 49193458 -91123307 + L1MEc LINE L1 537 1072 -5324 293 218 99 55 chr10 49193449 49193651 -91123114 - L1M4 LINE L1 -902 5244 5034 * 254 283 43 22 chr10 49193841 49193933 -91122832 - 7SK RNA RNA -95 98 5 3524 55 0 7 chr10 49195787 49196238 -91120527 + LTR7 LTR ERV1 1 448 -2 18839 92 10 35 chr10 49196240 49196639 -91120126 + HERVH LTR ERV1 1 408 -7305 4040 34 0 0 chr10 49196639 49197116 -91119649 + L1PA3 LINE L1 5679 6155 0 18839 92 10 35 chr10 49197116 49199786 -91116979 + HERVH LTR ERV1 408 2995 -4718 919 127 7 0 chr10 49199765 49199915 -91116850 + HERVH LTR ERV1 3140 3290 -4423 * 3203 113 0 6 chr10 49199905 49200410 -91116355 + HERVH LTR ERV1 3492 3993 -3720 4183 138 1 1 chr10 49200412 49201074 -91115691 + HERVH LTR ERV1 4488 5149 -2564 1296 128 18 14 chr10 49201075 49201294 -91115471 + HERVH LTR ERV1 5600 5819 -1894 2416 78 48 0 chr10 49201294 49201666 -91115099 + HERVH LTR ERV1 7324 7713 0 1118 81 11 6 chr10 49201666 49201840 -91114925 + LTR7 LTR ERV1 1 175 -275 401 333 42 18 chr10 49201964 49202132 -91114633 + MIR SINE MIR 18 189 -73 252 286 20 31 chr10 49202196 49202294 -91114471 - L2 LINE L2 -37 3276 3180 236 242 16 16 chr10 49204195 49204257 -91112508 + MIR SINE MIR 32 93 -115 497 290 95 36 chr10 49204338 49204559 -91112206 - MIR SINE MIR -10 252 19 1605 143 188 53 chr10 49205219 49205264 -91111501 - MSTA LTR MaLR 0 428 390 2392 61 7 0 chr10 49205264 49205558 -91111207 + AluY SINE Alu 1 296 -15 1605 143 188 53 chr10 49205558 49205889 -91110876 - MSTA LTR MaLR -38 390 1 8777 140 26 35 chr10 49205889 49207475 -91109290 - MSTA-int LTR MaLR 0 1580 9 1571 163 176 30 chr10 49207499 49207868 -91108897 - MSTA LTR MaLR -5 423 1 186 43 0 0 chr10 49207929 49207952 -91108813 + (CA)n Simple_repeat Simple_repeat 2 24 0 530 206 55 48 chr10 49209612 49209648 -91107117 + MLT1C LTR MaLR 8 42 -425 3559 143 132 11 chr10 49209648 49210279 -91106486 + MER39 LTR ERV1 1 707 0 530 206 55 48 chr10 49210279 49210407 -91106358 + MLT1C LTR MaLR 42 173 -294 260 336 88 18 chr10 49210654 49210767 -91105998 - MER5A DNA MER1_type -7 182 62 556 263 6 29 chr10 49210995 49211170 -91105595 + MER5B DNA MER1_type 4 174 -4 1231 280 57 18 chr10 49211855 49212362 -91104403 - L1MC/D LINE L1 -1992 5816 5290 983 202 67 10 chr10 49212565 49212773 -91103992 + AluJo SINE Alu 1 220 -92 189 0 0 0 chr10 49212795 49212816 -91103949 + (TC)n Simple_repeat Simple_repeat 1 21 0 357 0 57 0 chr10 49212821 49212874 -91103891 + (CA)n Simple_repeat Simple_repeat 2 57 0 673 335 61 45 chr10 49212933 49213228 -91103537 - L1MC/D LINE L1 -1235 4911 4622 2028 141 0 7 chr10 49213228 49213526 -91103239 + AluSx SINE Alu 6 301 -11 673 335 61 45 chr10 49213526 49213835 -91102930 - L1MC/D LINE L1 -1524 4622 4297 298 329 6 47 chr10 49214445 49214615 -91102150 + MIR SINE MIR 27 189 -73 352 331 44 6 chr10 49214832 49215013 -91101752 + MER117 DNA MER1_type 1 188 -9 215 267 68 99 chr10 49215286 49215447 -91101318 - MIR SINE MIR -6 256 101 246 288 115 36 chr10 49217133 49217272 -91099493 + MIR SINE MIR 20 169 -93 567 240 0 0 chr10 49217429 49217529 -91099236 - FLAM_A SINE Alu -41 101 2 227 208 102 188 chr10 49218006 49218124 -91098641 + MIR SINE MIR 77 173 -89 2105 128 3 82 chr10 49218124 49218490 -91098275 + MER1B DNA MER1_type 1 337 0 227 208 102 188 chr10 49218490 49218568 -91098197 + MIR SINE MIR 173 256 -6 861 279 34 67 chr10 49218714 49219015 -91097750 + L2 LINE L2 2968 3257 -56 1230 194 38 75 chr10 49219015 49219334 -91097431 + AluJb SINE Alu 1 307 -5 861 279 34 67 chr10 49219334 49219390 -91097375 + L2 LINE L2 3257 3313 0 3839 126 129 78 chr10 49219410 49220278 -91096487 - L1MA9 LINE L1 -32 6280 5369 492 224 20 0 chr10 49220333 49220431 -91096334 - AluJb SINE Alu -5 307 208 1335 163 19 27 chr10 49220432 49220690 -91096075 - AluJb SINE Alu -56 256 1 1695 144 13 7 chr10 49220696 49220995 -91095770 + L1 LINE L1 5059 5359 -787 1716 171 72 77 chr10 49221128 49221391 -91095374 + MER31B LTR ERV1 1 264 -279 5793 137 13 18 chr10 49221391 49221981 -91094784 - MER4D LTR ERV1 0 903 317 2197 124 3 3 chr10 49221981 49222287 -91094478 + AluSx SINE Alu 1 306 -6 5793 137 13 18 chr10 49222287 49222603 -91094162 - MER4D LTR ERV1 -586 317 1 1716 171 72 77 chr10 49222603 49222807 -91093958 + MER31B LTR ERV1 264 543 0 306 247 25 0 chr10 49222810 49222891 -91093874 - MIR SINE MIR -91 171 89 191 103 26 0 chr10 49223392 49223431 -91093334 + (TTG)n Simple_repeat Simple_repeat 1 40 0 379 282 0 0 chr10 49224364 49224467 -91092298 - MIR3 SINE MIR -1 207 105 620 241 108 22 chr10 49224636 49224868 -91091897 - MIR SINE MIR 0 262 11 301 222 50 10 chr10 49225035 49225134 -91091631 - L1ME4a LINE L1 -1 6120 6018 323 302 32 63 chr10 49225297 49225423 -91091342 - L2 LINE L2 0 3272 3151 1482 215 34 0 chr10 49225604 49225902 -91090863 + AluJo SINE Alu 1 308 -4 1894 189 175 25 chr10 49226284 49226456 -91090309 - MLT1D LTR MaLR 0 505 360 2387 137 6 6 chr10 49226456 49226793 -91089972 + MER1B DNA MER1_type 1 337 0 1894 189 175 25 chr10 49226793 49227059 -91089706 - MLT1D LTR MaLR -145 360 1 467 306 50 6 chr10 49227743 49227923 -91088842 - MER117 DNA MER1_type -9 188 1 22 56 0 0 chr10 49229406 49229442 -91087323 + AT_rich Low_complexity Low_complexity 1 36 0 539 266 34 51 chr10 49229911 49230088 -91086677 - MER5B DNA MER1_type 0 178 5 394 286 83 83 chr10 49230775 49231015 -91085750 - L2 LINE L2 -1 3271 3032 1013 191 11 21 chr10 49231015 49231204 -91085561 - MER5A DNA MER1_type -2 187 1 424 200 17 113 chr10 49231236 49231351 -91085414 + MER5A DNA MER1_type 9 112 -77 682 226 126 6 chr10 49231388 49231547 -91085218 - MER5B DNA MER1_type 0 178 1 200 228 120 84 chr10 49231567 49231734 -91085031 - L2 LINE L2 -270 3002 2830 1391 225 110 48 chr10 49231983 49232412 -91084353 + MER34B LTR ERV1 11 479 -86 195 42 0 0 chr10 49232412 49232436 -91084329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1391 225 110 48 chr10 49232436 49232526 -91084239 + MER34B LTR ERV1 479 562 -3 208 228 70 35 chr10 49232578 49232635 -91084130 - L2 LINE L2 -5 3308 3250 1020 232 38 0 chr10 49233578 49233789 -91082976 - MER20 DNA MER1_type 0 219 1 470 178 22 111 chr10 49234535 49234670 -91082095 + L2 LINE L2 3187 3309 -4 1234 263 92 20 chr10 49234779 49235288 -91081477 + L1MC4 LINE L1 6906 7451 -591 1789 221 107 28 chr10 49235288 49235712 -91081053 - MLT1F LTR MaLR 0 542 72 3678 153 8 52 chr10 49235712 49236352 -91080413 - LTR9 LTR ERV1 0 612 1 1789 221 107 28 chr10 49236352 49236421 -91080344 - MLT1F LTR MaLR -470 72 10 641 305 37 34 chr10 49236440 49236735 -91080030 + L1MC4a LINE L1 7377 7672 -136 * 1799 210 100 15 chr10 49236731 49237241 -91079524 + L1ME2 LINE L1 5667 6144 -20 228 261 153 0 chr10 49237324 49237435 -91079330 + L1MC4 LINE L1 7914 8041 -1 180 0 0 0 chr10 49237462 49237482 -91079283 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1242 160 63 48 chr10 49241557 49241825 -91074940 + MER39 LTR ERV1 3 274 -433 4356 148 7 24 chr10 49241848 49242557 -91074208 - MER50 LTR ERV1 -37 697 1 2642 91 19 3 chr10 49242562 49242924 -91073841 + MER39 LTR ERV1 340 707 0 1482 104 59 0 chr10 49242973 49243175 -91073590 - AluSc SINE Alu -11 298 85 521 326 69 60 chr10 49243317 49243750 -91073015 + L2 LINE L2 2836 3272 0 348 324 23 6 chr10 49244105 49244265 -91072500 - MIR3 SINE MIR -22 186 20 22 0 0 0 chr10 49244800 49244822 -91071943 + AT_rich Low_complexity Low_complexity 1 22 0 703 272 87 0 chr10 49246400 49246606 -91070159 + MIR SINE MIR 11 234 -28 21 0 0 0 chr10 49246639 49246660 -91070105 + AT_rich Low_complexity Low_complexity 1 21 0 230 185 111 0 chr10 49246680 49246734 -91070031 - MIR SINE MIR -70 192 133 197 326 147 16 chr10 49246742 49246871 -91069894 + L2 LINE L2 368 513 -2801 268 263 62 0 chr10 49246930 49247010 -91069755 + L2 LINE L2 682 766 -2548 233 180 60 0 chr10 49247037 49247087 -91069678 + LTR45 LTR ERV1 126 178 -347 788 354 90 25 chr10 49247099 49247884 -91068881 + L2 LINE L2 875 1710 -1604 390 296 37 15 chr10 49248990 49249125 -91067640 + MIR3 SINE MIR 23 160 -48 2260 101 0 3 chr10 49249286 49249583 -91067182 + AluSc SINE Alu 1 296 -13 25 31 0 0 chr10 49249619 49249651 -91067114 + AT_rich Low_complexity Low_complexity 1 32 0 2118 198 55 34 chr10 49250105 49250600 -91066165 + MLT1D LTR MaLR 1 505 0 276 289 59 128 chr10 49250650 49250837 -91065928 + L2 LINE L2 2909 3082 -190 1590 157 44 35 chr10 49251190 49251508 -91065257 - Tigger7 DNA MER2_type 0 2487 2167 593 212 0 53 chr10 49251509 49251641 -91065124 - Tigger7 DNA MER2_type -2359 128 4 334 164 27 127 chr10 49252575 49252685 -91064080 + MER103 DNA DNA 2 100 -66 215 274 0 0 chr10 49252811 49252862 -91063903 + L2 LINE L2 3261 3311 -2 1587 154 0 0 chr10 49254205 49254439 -91062326 - AluSx SINE Alu -78 234 1 388 327 93 70 chr10 49254548 49254936 -91061829 + L2 LINE L2 2824 3220 -52 1668 266 94 49 chr10 49255028 49256000 -91060765 - L1MCa LINE L1 -2657 3769 2842 1916 142 22 19 chr10 49256000 49256311 -91060454 - AluSx SINE Alu 0 312 1 1668 266 94 49 chr10 49256311 49256746 -91060019 - L1MCa LINE L1 -3584 2842 2428 2311 75 7 3 chr10 49256746 49257039 -91059726 - AluY SINE Alu -17 294 1 1668 266 94 49 chr10 49257039 49257312 -91059453 - L1MCa LINE L1 -3998 2428 2013 1045 304 69 37 chr10 49257334 49258193 -91058572 - L1MCa LINE L1 -4608 1999 900 721 250 117 87 chr10 49259053 49259181 -91057584 + MLT1G LTR MaLR 1 124 -431 3382 171 72 6 chr10 49259181 49259817 -91056948 - LTR58 LTR ERV1 -1 678 1 721 250 117 87 chr10 49259817 49260212 -91056553 + MLT1G LTR MaLR 124 555 0 990 251 110 72 chr10 49261257 49261786 -91054979 - MLT1H LTR MaLR 0 549 1 318 348 15 22 chr10 49261846 49261981 -91054784 - L2 LINE L2 -221 3051 2918 378 239 231 8 chr10 49262157 49262287 -91054478 + MIR SINE MIR 29 187 -75 306 0 0 0 chr10 49262711 49262745 -91054020 + (T)n Simple_repeat Simple_repeat 1 34 0 233 348 76 11 chr10 49263147 49263239 -91053526 - L2 LINE L2 -15 3298 3201 238 288 0 30 chr10 49263368 49263434 -91053331 + L2 LINE L2 3229 3292 -21 216 111 0 0 chr10 49263439 49263475 -91053290 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 1608 248 108 35 chr10 49263493 49264097 -91052668 + MER21B LTR ERV1 15 662 -201 180 0 0 0 chr10 49264097 49264117 -91052648 + (AATTG)n Simple_repeat Simple_repeat 1 20 0 261 260 132 28 chr10 49264811 49265061 -91051704 + L1ME4a LINE L1 5729 6004 -117 213 288 51 68 chr10 49266560 49266678 -91050087 - MER5A DNA MER1_type -22 167 52 231 232 0 54 chr10 49267276 49267332 -91049433 + MER5B DNA MER1_type 2 54 -124 240 193 0 35 chr10 49267701 49267758 -91049007 + (TA)n Simple_repeat Simple_repeat 1 55 0 291 259 0 0 chr10 49267759 49267844 -91048921 - L1MC4 LINE L1 -1341 6701 6617 409 147 47 0 chr10 49367946 49368116 -90948649 + (TA)n Simple_repeat Simple_repeat 2 179 0 24 32 0 0 chr10 49368270 49368301 -90948464 + AT_rich Low_complexity Low_complexity 1 31 0 447 316 30 34 chr10 49368509 49368746 -90948019 - MIR SINE MIR -14 248 13 489 314 57 6 chr10 49368951 49369126 -90947639 + MER5A DNA MER1_type 6 189 0 2564 208 45 21 chr10 49369191 49369925 -90946840 - L1MB4 LINE L1 -1 6177 5448 914 137 0 0 chr10 49369930 49370054 -90946711 + AluSq/x SINE Alu 3 126 -186 421 192 0 0 chr10 49370096 49370169 -90946596 + AluSc SINE Alu 128 200 -109 268 310 0 0 chr10 49370360 49370431 -90946334 + MIR SINE MIR 2 72 -190 366 147 0 53 chr10 49370440 49370515 -90946250 + AluJ/FRAM SINE Alu 232 302 0 1863 164 0 20 chr10 49370630 49370929 -90945836 + AluSx SINE Alu 1 293 -19 200 253 66 0 chr10 49371596 49371687 -90945078 - L2 LINE L2 -219 3053 2957 429 183 14 0 chr10 49373401 49373472 -90943293 - AluJ/FLAM SINE Alu -238 74 3 1456 102 5 5 chr10 49373487 49373684 -90943081 - AluSp SINE Alu -21 292 96 761 250 10 15 chr10 49375841 49376037 -90940728 - AluJb SINE Alu -117 195 1 283 116 0 0 chr10 49376657 49376700 -90940065 + AluSc SINE Alu 158 200 -99 555 192 17 0 chr10 49376710 49376830 -90939935 - L1MB4 LINE L1 -1249 4897 4776 * 1244 182 5 0 chr10 49376828 49377116 -90939649 + L1M2 LINE L1 5159 5448 -743 673 74 0 0 chr10 49377084 49377179 -90939586 + L1PB1 LINE L1 6057 6151 0 * 6531 227 53 85 chr10 49377177 49379220 -90937545 - L1M4 LINE L1 -830 5814 3707 2585 50 0 0 chr10 49379220 49379519 -90937246 + AluY SINE Alu 8 306 -5 6531 227 53 85 chr10 49379519 49382549 -90934216 - L1M4 LINE L1 -2937 3707 817 2239 118 0 6 chr10 49382652 49382973 -90933792 + L1PA11 LINE L1 5759 6077 -97 448 67 17 0 chr10 49383073 49383133 -90933632 - MER57A LTR ERV1 -342 61 1 1260 114 204 9 chr10 49383133 49383353 -90933412 - MER57A-int LTR ERV1 0 7537 7275 717 142 26 0 chr10 49383374 49383487 -90933278 - LTR54B LTR ERV1 -380 118 3 9535 99 17 9 chr10 49383487 49383887 -90932878 - MER57A-int LTR ERV1 -389 7148 6753 2853 7 0 0 chr10 49383887 49384190 -90932575 + AluYa5 SINE Alu 1 303 -8 9535 99 17 9 chr10 49384190 49385118 -90931647 - MER57A-int LTR ERV1 -784 6753 5810 5786 227 138 18 chr10 49385119 49386484 -90930281 + MER52A LTR ERV1 2 1529 -226 2903 179 48 0 chr10 49386497 49387022 -90929743 + ERVL LTR ERVL 4201 4750 -1014 1362 176 81 11 chr10 49388549 49388873 -90927892 + AluJo SINE Alu 2 302 0 1581 179 50 0 chr10 49389510 49389828 -90926937 - L1PB4 LINE L1 -2 6154 5821 2433 117 5 21 chr10 49389928 49390303 -90926462 - THE1C LTR MaLR -6 369 1 609 246 49 92 chr10 49390303 49390628 -90926137 + L2 LINE L2 3003 3313 0 2023 187 54 37 chr10 49391468 49392022 -90924743 + L1MB4 LINE L1 5710 6178 -2 253 165 52 0 chr10 49392022 49392119 -90924646 + (TA)n Simple_repeat Simple_repeat 1 102 0 334 118 26 79 chr10 49392172 49392183 -90924582 + L1MC1 LINE L1 6252 6262 -71 232 57 29 0 chr10 49392183 49392218 -90924547 + (TA)n Simple_repeat Simple_repeat 2 37 0 334 118 26 79 chr10 49392218 49392282 -90924483 + L1MC1 LINE L1 6262 6323 -10 1343 243 41 33 chr10 49393189 49393556 -90923209 - MLT1A2 LTR MaLR -4 370 1 993 228 141 25 chr10 49393788 49393846 -90922919 - MLT1C LTR MaLR -3 464 414 207 0 0 0 chr10 49393846 49393869 -90922896 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 993 228 141 25 chr10 49393869 49394178 -90922587 - MLT1C LTR MaLR -53 414 54 2501 45 0 63 chr10 49396329 49396661 -90920104 + AluY SINE Alu 1 311 0 30 0 0 0 chr10 49397113 49397143 -90919622 + AT_rich Low_complexity Low_complexity 1 30 0 586 250 6 18 chr10 49397227 49397391 -90919374 + MIR SINE MIR 77 238 -24 25 31 0 0 chr10 49397393 49397425 -90919340 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr10 49397581 49397609 -90919156 + AT_rich Low_complexity Low_complexity 1 28 0 2288 109 0 0 chr10 49399660 49399954 -90916811 + AluSq SINE Alu 1 294 -19 808 175 0 0 chr10 49400351 49400477 -90916288 - AluJo/FRAM SINE Alu -27 285 160 231 191 0 24 chr10 49400477 49400519 -90916246 - Alu SINE Alu -267 41 1 2286 100 16 10 chr10 49400563 49400874 -90915891 + AluSq SINE Alu 1 313 0 720 231 104 47 chr10 49400917 49401215 -90915550 - L1MC4 LINE L1 -89 7953 7639 31 26 0 0 chr10 49402108 49402146 -90914619 + AT_rich Low_complexity Low_complexity 1 38 0 1206 133 66 9 chr10 49402167 49402378 -90914387 - AluJo SINE Alu 0 312 90 979 178 6 6 chr10 49402377 49402534 -90914231 - AluJo SINE Alu -155 157 1 * 1540 204 19 0 chr10 49402536 49402860 -90913905 - L1MB7 LINE L1 -43 6141 5812 2367 93 3 10 chr10 49402875 49403187 -90913578 + AluSx SINE Alu 1 310 -2 4538 178 36 39 chr10 49403189 49404401 -90912364 - L1MB3 LINE L1 -10 6173 4957 2532 43 0 56 chr10 49404401 49404723 -90912042 - AluYb8 SINE Alu -14 304 1 4538 178 36 39 chr10 49404723 49404916 -90911849 - L1MB3 LINE L1 -1226 4957 4765 1511 218 3 3 chr10 49404929 49405218 -90911547 - AluJb SINE Alu -23 289 1 347 274 188 5 chr10 49406769 49406955 -90909810 - MIR SINE MIR -3 259 40 2090 77 4 11 chr10 49407215 49407488 -90909277 - AluY SINE Alu -40 271 1 287 294 13 39 chr10 49408126 49408279 -90908486 + GA-rich Low_complexity Low_complexity 1 149 0 3275 132 74 0 chr10 49409614 49410130 -90906635 - MER41C LTR ERV1 0 554 1 324 296 41 0 chr10 49410338 49410436 -90906329 + HAL1 LINE L1 1582 1683 -824 461 314 97 0 chr10 49410599 49410774 -90905991 - LTR16B LTR ERVL -183 281 90 183 80 0 0 chr10 49410915 49410940 -90905825 + (A)n Simple_repeat Simple_repeat 1 25 0 1231 170 91 47 chr10 49410949 49411225 -90905540 + AluJo SINE Alu 7 294 -18 1804 113 0 104 chr10 49411227 49411564 -90905201 + AluSc SINE Alu 1 302 -7 324 306 90 18 chr10 49411569 49411847 -90904918 + L1M4 LINE L1 2207 2504 -3642 1898 126 4 4 chr10 49411938 49412207 -90904558 + AluSx SINE Alu 3 271 -41 2755 59 12 0 chr10 49413262 49413602 -90903163 + LTR14A LTR ERVK 1 344 0 213 178 0 0 chr10 49415105 49415150 -90901615 + (CCCTAA)n Simple_repeat Simple_repeat 2 46 0 282 125 0 0 chr10 49415201 49415249 -90901516 + (CCCTAA)n Simple_repeat Simple_repeat 2 49 0 227 204 107 48 chr10 49417101 49417204 -90899561 - L2 LINE L2 -2530 784 676 1961 229 104 2 chr10 49417267 49417768 -90898997 - MLT1G LTR MaLR -2 588 37 743 199 124 55 chr10 49417791 49418019 -90898746 + HsTC2 DNA Tc2 1525 1787 -111 1915 130 53 7 chr10 49418019 49418304 -90898461 + AluSx SINE Alu 1 298 -14 743 199 124 55 chr10 49418304 49418421 -90898344 + HsTC2 DNA Tc2 1787 1894 -4 683 261 45 77 chr10 49418453 49418887 -90897878 - L1ME LINE L1 -651 5515 5123 2032 79 0 69 chr10 49418887 49419178 -90897587 - AluSg1 SINE Alu -6 303 33 683 261 45 77 chr10 49419178 49419463 -90897302 - L1ME LINE L1 -1043 5123 4830 1217 145 42 19 chr10 49419464 49419678 -90897087 - AluSg/x SINE Alu -8 304 86 382 205 120 17 chr10 49419788 49419905 -90896860 + MLT1I LTR MaLR 60 188 -221 225 239 147 0 chr10 49420092 49420201 -90896564 - L1ME LINE L1 -1394 4752 4628 70 0 0 0 chr10 49420245 49420315 -90896450 + AT_rich Low_complexity Low_complexity 1 70 0 706 286 153 26 chr10 49420323 49420899 -90895866 - L1ME LINE L1 -2001 4145 3497 1098 241 79 16 chr10 49421018 49421181 -90895584 - Ricksha DNA DNA -2727 519 337 1098 155 17 0 chr10 49421181 49421355 -90895410 - ERVL LTR ERVL -1 5763 5587 234 94 0 0 chr10 49421408 49421440 -90895325 + MLT2A1 LTR ERVL 413 444 0 32 26 0 0 chr10 49421740 49421779 -90894986 + AT_rich Low_complexity Low_complexity 1 39 0 439 276 91 80 chr10 49422440 49422726 -90894039 + MLT1F-int LTR MaLR 1023 1311 -60 631 257 0 7 chr10 49422774 49422914 -90893851 + MLT1F LTR MaLR 5 143 -399 29 28 0 0 chr10 49423034 49423070 -90893695 + AT_rich Low_complexity Low_complexity 1 36 0 381 43 0 0 chr10 49423381 49423428 -90893337 + (CA)n Simple_repeat Simple_repeat 1 47 0 2184 155 64 31 chr10 49423561 49423981 -90892784 + Tigger2a DNA MER2_type 1 434 0 755 172 46 17 chr10 49426474 49426648 -90890117 - L1MA10 LINE L1 -1 6333 6155 221 255 0 0 chr10 49426832 49426879 -90889886 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 379 231 33 33 chr10 49428173 49428264 -90888501 + MIR SINE MIR 47 137 -125 22 56 0 0 chr10 49428950 49428986 -90887779 + AT_rich Low_complexity Low_complexity 1 36 0 2288 58 44 17 chr10 49429274 49429569 -90887196 - AluY SINE Alu -7 304 2 1594 181 0 39 chr10 49429733 49430042 -90886723 - AluJb SINE Alu -15 297 1 255 247 31 41 chr10 49430188 49430285 -90886480 + MIR SINE MIR 96 191 -71 502 304 123 0 chr10 49430943 49431163 -90885602 + MIR SINE MIR 1 247 -15 316 280 104 0 chr10 49431633 49431758 -90885007 + MIR SINE MIR 52 189 -73 2119 116 0 0 chr10 49432874 49433151 -90883614 + AluSx SINE Alu 1 277 -35 272 27 27 0 chr10 49433155 49433192 -90883573 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 268 352 36 36 chr10 49433451 49433644 -90883121 - L3 LINE CR1 -133 1444 1252 993 256 9 0 chr10 49433794 49434013 -90882752 - MER58A DNA MER1_type -3 221 1 273 321 0 0 chr10 49434386 49434467 -90882298 - L3 LINE CR1 -1050 527 447 239 164 36 0 chr10 49434980 49435035 -90881730 + GA-rich Low_complexity Low_complexity 2 58 0 1648 182 25 0 chr10 49435099 49435374 -90881391 + MLT2B1 LTR ERVL 1 282 -238 2720 89 25 109 chr10 49435407 49435531 -90881234 - MER1A DNA MER1_type -2184 522 389 2211 122 0 0 chr10 49435531 49435818 -90880947 - AluSq SINE Alu -25 288 2 2720 89 25 109 chr10 49435818 49436270 -90880495 - MER1A DNA MER1_type -2317 389 3 257 53 0 73 chr10 49436271 49436312 -90880453 - L1M4 LINE L1 -5508 1034 999 231 114 0 0 chr10 49436314 49436349 -90880416 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2644 222 21 34 chr10 49436386 49437007 -90879758 - L1M4 LINE L1 -5763 779 167 246 128 0 0 chr10 49437042 49437081 -90879684 + (CA)n Simple_repeat Simple_repeat 2 40 0 611 102 10 20 chr10 49437081 49437179 -90879586 + MER4A LTR ERV1 2 98 -566 1817 147 11 19 chr10 49437179 49437527 -90879238 + MER4A LTR ERV1 261 664 0 2151 112 77 33 chr10 49437530 49437895 -90878870 + MER4A-int LTR ERV1 1 381 -6217 2005 196 68 23 chr10 49437899 49438338 -90878427 + LTR2B LTR ERV1 32 490 0 1904 146 124 114 chr10 49438338 49439031 -90877734 + MER4-int LTR ERV1 364 1111 -5487 381 102 0 0 chr10 49439031 49439090 -90877675 + (TG)n Simple_repeat Simple_repeat 2 60 0 2478 168 69 56 chr10 49439090 49439194 -90877571 + MER4-int LTR ERV1 1161 1262 -5336 231 36 0 0 chr10 49439194 49439222 -90877543 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2478 168 69 56 chr10 49439222 49439699 -90877066 + MER4-int LTR ERV1 1262 1753 -4845 2401 82 7 3 chr10 49439699 49440004 -90876761 - AluSq SINE Alu -7 306 1 2478 168 69 56 chr10 49440004 49440047 -90876718 + MER4-int LTR ERV1 1753 1794 -4804 2177 121 3 0 chr10 49440051 49440348 -90876417 - AluSx SINE Alu -12 300 3 202 105 105 0 chr10 49440478 49440516 -90876249 - MER5C DNA MER1_type -200 124 83 2005 147 0 19 chr10 49440765 49441072 -90875693 - AluSx SINE Alu -11 301 1 180 0 0 0 chr10 49441271 49441291 -90875474 + (A)n Simple_repeat Simple_repeat 1 20 0 1536 122 10 0 chr10 49441342 49441547 -90875218 - AluSq SINE Alu -106 207 1 478 152 152 0 chr10 49441592 49441684 -90875081 + FRAM SINE Alu 58 163 -13 27 62 0 0 chr10 49441820 49441868 -90874897 + AT_rich Low_complexity Low_complexity 1 48 0 467 241 58 0 chr10 49441932 49442069 -90874696 + MIR SINE MIR 107 251 -11 5578 190 38 36 chr10 49442074 49442797 -90873968 + L1M3 LINE L1 3986 4706 -1477 2368 88 0 3 chr10 49442797 49443092 -90873673 + AluSg SINE Alu 1 294 -16 5578 190 38 36 chr10 49443092 49443664 -90873101 + L1M3 LINE L1 4706 5275 -908 2403 71 7 0 chr10 49443664 49443960 -90872805 + AluY SINE Alu 1 298 -13 2073 151 0 0 chr10 49443968 49444266 -90872499 + AluSx SINE Alu 1 298 -14 5578 190 38 36 chr10 49444266 49444623 -90872142 + L1M3 LINE L1 5281 5670 -513 2112 115 3 10 chr10 49444625 49444920 -90871845 + AluSx SINE Alu 3 295 -17 402 120 0 93 chr10 49444927 49445002 -90871763 + FLAM_A SINE Alu 66 133 0 802 97 0 0 chr10 49445038 49445141 -90871624 - AluSq/x SINE Alu -209 103 1 237 91 0 0 chr10 49445141 49445185 -90871580 + L1MB4 LINE L1 6135 6178 -2 816 275 71 31 chr10 49445784 49446108 -90870657 + LTR33 LTR ERVL 1 337 -184 415 370 21 5 chr10 49446321 49446510 -90870255 - MIR SINE MIR -51 211 20 767 136 7 57 chr10 49446552 49446692 -90870073 - FLAM_C SINE Alu 0 133 1 2047 129 3 23 chr10 49446821 49447131 -90869634 - AluSq SINE Alu -9 304 1 8977 99 16 2 chr10 49447169 49449215 -90867550 + L1PA10 LINE L1 4101 6166 -2 22 35 0 0 chr10 49449536 49449565 -90867200 + AT_rich Low_complexity Low_complexity 1 29 0 423 302 74 56 chr10 49450503 49450681 -90866084 + LTR16A LTR ERVL 60 233 -217 2434 62 0 0 chr10 49450681 49450971 -90865794 - AluY SINE Alu -21 290 1 423 302 74 56 chr10 49450971 49451169 -90865596 + LTR16A LTR ERVL 233 443 -7 2385 72 0 44 chr10 49451420 49451738 -90865027 + AluSc SINE Alu 1 304 -5 2264 150 57 7 chr10 49452112 49452518 -90864247 - MSTB1 LTR MaLR 0 432 7 368 316 63 0 chr10 49452534 49452724 -90864041 + MIR SINE MIR 60 261 -1 2354 95 0 3 chr10 49453269 49453575 -90863190 - AluY SINE Alu -5 306 2 931 126 0 0 chr10 49453578 49453705 -90863060 - AluJb SINE Alu -20 292 166 239 313 21 0 chr10 49456260 49456356 -90860409 - L2 LINE L2 -991 2323 2226 388 205 6 24 chr10 49457407 49457573 -90859192 + (TG)n Simple_repeat Simple_repeat 2 164 0 235 180 93 43 chr10 49457678 49457839 -90858926 + (AGCTG)n Simple_repeat Simple_repeat 4 172 0 * 427 209 30 76 chr10 49457806 49458182 -90858583 + (AGGTG)n Simple_repeat Simple_repeat 1 358 0 504 225 47 0 chr10 49458241 49458410 -90858355 + (AGGTG)n Simple_repeat Simple_repeat 3 179 0 493 226 48 0 chr10 49458450 49458618 -90858147 + (AGGTG)n Simple_repeat Simple_repeat 4 179 0 1553 178 101 14 chr10 49460231 49460586 -90856179 + MLT1B LTR MaLR 5 390 0 1531 201 33 41 chr10 49461936 49462304 -90854461 - MLT1A1 LTR MaLR 0 365 1 1128 143 0 82 chr10 49462307 49462538 -90854227 + MLT2B2 LTR ERVL 304 515 0 258 32 0 0 chr10 49462615 49462646 -90854119 + (GA)n Simple_repeat Simple_repeat 2 32 0 325 263 25 25 chr10 49465526 49465644 -90851121 + MIR SINE MIR 32 149 -113 815 283 77 17 chr10 49467137 49467525 -90849240 + L1P5 LINE L1 4 1136 -6449 418 286 55 25 chr10 49468045 49468283 -90848482 + L1M2 LINE L1 819 1063 -5786 375 329 24 37 chr10 49468458 49468848 -90847917 + L1P5 LINE L1 1735 2213 -5371 500 263 70 0 chr10 49468871 49469027 -90847738 + L1M2 LINE L1 62 228 -6621 3238 164 116 3 chr10 49469027 49469794 -90846971 + L1P5 LINE L1 2225 3078 -4506 2962 149 11 2 chr10 49469794 49470385 -90846380 + L1P5 LINE L1 6640 7234 -360 695 62 10 0 chr10 49470485 49470582 -90846183 + L1PA11 LINE L1 6076 6173 -1 300 346 96 59 chr10 49470626 49470950 -90845815 - L1M4 LINE L1 -5857 685 350 276 319 64 20 chr10 49471030 49471234 -90845531 - L1M4 LINE L1 -6282 260 48 263 277 71 36 chr10 49471355 49471467 -90845298 + MER58B DNA MER1_type 226 341 0 224 325 25 12 chr10 49472526 49472606 -90844159 + MIR3 SINE MIR 4 84 -124 2137 96 6 51 chr10 49472610 49472924 -90843841 - AluSc SINE Alu -9 300 1 3225 155 54 28 chr10 49473219 49473853 -90842912 - MER39B LTR ERV1 0 653 4 336 362 37 12 chr10 49473856 49474019 -90842746 + L2 LINE L2 3106 3272 0 212 0 36 0 chr10 49474908 49474936 -90841829 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 408 304 82 7 chr10 49476492 49476627 -90840138 - MIR SINE MIR -98 164 20 244 247 21 21 chr10 49476800 49476897 -90839868 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 25 0 0 0 chr10 49477063 49477088 -90839677 + AT_rich Low_complexity Low_complexity 1 25 0 1690 118 118 18 chr10 49477088 49477368 -90839397 - AluSg1 SINE Alu -1 308 1 6505 69 23 0 chr10 49477424 49478430 -90838335 - L1PA7 LINE L1 -4 6150 5133 22 35 0 0 chr10 49479001 49479030 -90837735 + AT_rich Low_complexity Low_complexity 1 29 0 1164 218 69 49 chr10 49479614 49479962 -90836803 + MLT1A1 LTR MaLR 10 364 -1 225 331 79 39 chr10 49479998 49480176 -90836589 + MIR SINE MIR 71 255 -7 22 35 0 0 chr10 49481075 49481104 -90835661 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 49481708 49481736 -90835029 + AT_rich Low_complexity Low_complexity 1 28 0 252 345 18 42 chr10 49482295 49482463 -90834302 + MIR SINE MIR 91 254 -8 360 307 49 62 chr10 49482851 49483076 -90833689 - MIR SINE MIR 0 262 41 1981 104 35 11 chr10 49483656 49483975 -90832790 + AluSp SINE Alu 1 313 0 280 248 50 40 chr10 49484453 49484554 -90832211 + L1MD1 LINE L1 890 991 -5549 * 3874 220 17 18 chr10 49484538 49485546 -90831219 + L1MD1 LINE L1 5630 6636 0 1896 245 66 51 chr10 49485526 49485772 -90830993 + L1MB1 LINE L1 3012 3253 -2893 * 2200 131 10 0 chr10 49485772 49486078 -90830687 + AluSq SINE Alu 2 310 -3 1896 245 66 51 chr10 49486078 49486952 -90829813 + L1MB1 LINE L1 3253 4149 -1997 1257 198 3 58 chr10 49486985 49487298 -90829467 + AluJo SINE Alu 1 296 -16 406 258 170 0 chr10 49487299 49487481 -90829284 + L1MB1 LINE L1 4377 4589 -1557 27 49 0 0 chr10 49487544 49487585 -90829180 + AT_rich Low_complexity Low_complexity 1 41 0 216 0 0 0 chr10 49487957 49487981 -90828784 + (TC)n Simple_repeat Simple_repeat 1 24 0 271 254 16 0 chr10 49489318 49489381 -90827384 + MER5B DNA MER1_type 1 64 -114 852 193 0 0 chr10 49489382 49489527 -90827238 + FRAM SINE Alu 2 146 -30 227 250 232 0 chr10 49489536 49489592 -90827173 + MER5B DNA MER1_type 50 118 -60 295 254 77 53 chr10 49489818 49489987 -90826778 + L1MB1 LINE L1 4966 5138 -1008 730 164 90 5 chr10 49490038 49490227 -90826538 + L1MB1 LINE L1 5266 5470 -698 2475 178 44 4 chr10 49490242 49490742 -90826023 + L1MB1 LINE L1 5649 6168 0 545 278 12 3 chr10 49490742 49491029 -90825736 + L1ME3 LINE L1 5194 5486 -678 754 143 0 17 chr10 49491035 49491154 -90825611 + FRAM SINE Alu 41 157 -19 1092 280 33 9 chr10 49491159 49491588 -90825177 + L1ME3 LINE L1 5481 5919 -243 288 356 34 0 chr10 49491608 49491754 -90825011 + L1ME3 LINE L1 5995 6145 -17 33 0 0 0 chr10 49491793 49491826 -90824939 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr10 49491897 49491930 -90824835 + AT_rich Low_complexity Low_complexity 1 33 0 267 325 125 25 chr10 49491956 49492076 -90824689 - MIR SINE MIR -84 178 47 39 0 0 0 chr10 49492130 49492169 -90824596 + AT_rich Low_complexity Low_complexity 1 39 0 966 330 158 9 chr10 49492388 49493021 -90823744 + L2 LINE L2 293 1019 -2295 385 235 188 42 chr10 49493025 49493238 -90823527 + L2 LINE L2 2522 2765 -549 474 192 10 0 chr10 49493434 49493538 -90823227 + AluY SINE Alu 204 308 -3 1979 120 9 48 chr10 49495448 49495764 -90821001 + AluSg SINE Alu 1 304 -6 258 266 0 25 chr10 49496562 49496641 -90820124 + Charlie1 DNA MER1_type 1 77 -2684 2411 102 0 0 chr10 49496642 49496955 -90819810 - AluSq SINE Alu 0 313 1 1447 218 163 21 chr10 49497023 49497386 -90819379 + Charlie1 DNA MER1_type 88 398 -2363 1243 172 101 30 chr10 49497386 49497654 -90819111 + AluJo SINE Alu 1 287 -25 1447 218 163 21 chr10 49497654 49498131 -90818634 + Charlie1 DNA MER1_type 398 806 -1955 2154 119 3 0 chr10 49498131 49498426 -90818339 - AluSx SINE Alu -12 300 5 1447 218 163 21 chr10 49498426 49498440 -90818325 + Charlie1 DNA MER1_type 806 817 -1944 2072 132 0 0 chr10 49498440 49498743 -90818022 - AluY SINE Alu -8 303 1 1447 218 163 21 chr10 49498743 49498909 -90817856 + Charlie1 DNA MER1_type 817 2580 -181 701 244 6 0 chr10 49498925 49499081 -90817684 + MER20 DNA MER1_type 60 216 -3 232 259 62 9 chr10 49499095 49499207 -90817558 + Charlie1 DNA MER1_type 2621 2738 -23 661 270 0 0 chr10 49499702 49499861 -90816904 - FRAM SINE Alu -6 160 2 1232 92 0 0 chr10 49499887 49500039 -90816726 - AluSp SINE Alu -32 281 130 332 170 99 106 chr10 49500188 49500329 -90816436 - MIR3 SINE MIR -1 207 68 613 251 46 29 chr10 49500354 49500529 -90816236 - MER5B DNA MER1_type 0 178 1 2070 133 0 0 chr10 49502353 49502647 -90814118 + AluY SINE Alu 2 295 -16 383 234 53 115 chr10 49502647 49502873 -90813892 - HAL1 LINE L1 -871 1636 1425 226 304 74 27 chr10 49502874 49503210 -90813555 - L1MEd LINE L1 -4902 1217 866 2485 68 0 0 chr10 49504465 49504773 -90811992 - AluY SINE Alu -3 308 1 3124 187 0 30 chr10 49505873 49506569 -90810196 - L1 LINE L1 -1685 4461 3786 2330 84 0 7 chr10 49506569 49506865 -90809900 - AluSg SINE Alu -16 294 1 3124 187 0 30 chr10 49506865 49506890 -90809875 - L1 LINE L1 -2360 3786 3762 3222 207 23 9 chr10 49506891 49507719 -90809046 + L1PB1 LINE L1 4459 5300 -846 2629 112 37 5 chr10 49507719 49507771 -90808994 + L1PB1 LINE L1 5709 5758 -393 192 77 0 0 chr10 49507771 49507797 -90808968 + (TA)n Simple_repeat Simple_repeat 2 27 0 2629 112 37 5 chr10 49507797 49508152 -90808613 + L1PB1 LINE L1 5758 6150 -1 3222 207 23 9 chr10 49508152 49508163 -90808602 + L1PB1 LINE L1 5300 5309 -837 1235 158 5 23 chr10 49508275 49508490 -90808275 - AluJo SINE Alu -15 297 87 425 326 178 39 chr10 49508738 49509176 -90807589 + HAL1 LINE L1 4 502 -2005 257 300 194 11 chr10 49509215 49509498 -90807267 + HAL1 LINE L1 576 910 -1597 267 269 24 43 chr10 49509562 49509770 -90806995 + HAL1 LINE L1 1088 1291 -1216 388 275 124 37 chr10 49509791 49510009 -90806756 + HAL1 LINE L1 1367 1603 -904 480 340 60 37 chr10 49510033 49510413 -90806352 + HAL1 LINE L1 1696 2084 -423 328 181 56 0 chr10 49510565 49510637 -90806128 + HAL1 LINE L1 2097 2172 -335 2240 118 3 0 chr10 49510805 49511102 -90805663 - AluSx SINE Alu -14 298 1 26 50 0 0 chr10 49511496 49511536 -90805229 + AT_rich Low_complexity Low_complexity 1 40 0 1965 147 0 10 chr10 49511945 49512244 -90804521 - AluY SINE Alu -15 296 1 1752 199 50 22 chr10 49512534 49512715 -90804050 + MSTB LTR MaLR 1 176 -250 2213 131 0 0 chr10 49512715 49513012 -90803753 + AluSx SINE Alu 1 297 -15 1752 199 50 22 chr10 49513012 49513233 -90803532 + MSTB LTR MaLR 176 414 -12 711 177 7 64 chr10 49514242 49514383 -90802382 + FLAM_A SINE Alu 1 133 0 2257 100 0 16 chr10 49515299 49515608 -90801157 - AluSx SINE Alu -8 304 1 200 234 0 21 chr10 49517184 49517231 -90799534 + (CCCCAG)n Simple_repeat Simple_repeat 4 49 0 363 281 179 20 chr10 49518170 49518366 -90798399 - MIR SINE MIR -3 259 33 1220 175 84 99 chr10 49518397 49518645 -90798120 - THE1C LTR MaLR -6 422 167 1986 155 0 0 chr10 49518645 49518949 -90797816 + AluSx SINE Alu 1 304 0 1220 175 84 99 chr10 49518949 49519114 -90797651 - THE1C LTR MaLR -261 167 1 229 100 0 0 chr10 49519175 49519232 -90797533 - AluSp/q SINE Alu 0 312 256 404 194 9 65 chr10 49519232 49519340 -90797425 - L1M4 LINE L1 -1763 4383 4282 1735 106 117 8 chr10 49519345 49519609 -90797156 - AluSc SINE Alu -16 293 1 1891 125 30 20 chr10 49519632 49519927 -90796838 - AluSx SINE Alu -11 301 4 201 216 0 0 chr10 49519978 49520015 -90796750 - L2 LINE L2 -16 3256 3220 243 337 74 0 chr10 49521016 49521111 -90795654 + L2 LINE L2 3155 3256 -16 258 356 90 14 chr10 49521222 49521511 -90795254 - L2 LINE L2 -1471 1843 1533 2282 92 3 0 chr10 49521617 49521912 -90794853 - AluY SINE Alu -15 296 1 234 0 0 0 chr10 49521919 49521945 -90794820 + (A)n Simple_repeat Simple_repeat 1 26 0 2322 93 0 19 chr10 49524047 49524360 -90792405 + AluSx SINE Alu 1 307 -5 240 327 68 34 chr10 49524487 49524692 -90792073 + L2 LINE L2 1057 1268 -2046 1063 172 31 66 chr10 49524974 49525230 -90791535 + AluJb SINE Alu 21 267 -45 1618 198 16 39 chr10 49525251 49525615 -90791150 + MER93b LTR ERV1 1 356 -17 375 318 15 8 chr10 49525615 49525747 -90791018 + L1MC1 LINE L1 6201 6333 0 252 262 19 48 chr10 49526021 49526124 -90790641 + 5S rRNA rRNA 20 119 -2 369 0 0 0 chr10 49526162 49526203 -90790562 + (CA)n Simple_repeat Simple_repeat 2 42 0 332 102 0 17 chr10 49526831 49526890 -90789875 + (CA)n Simple_repeat Simple_repeat 2 59 0 693 181 0 114 chr10 49528012 49528222 -90788543 - L1M3 LINE L1 -727 5441 5256 2379 111 0 0 chr10 49528263 49528570 -90788195 - AluSp SINE Alu -6 307 1 1981 107 26 0 chr10 49528616 49528888 -90787877 - AluSx SINE Alu -33 279 1 1339 226 83 65 chr10 49529332 49529451 -90787314 + MLT1D LTR MaLR 1 116 -389 1521 222 73 6 chr10 49529451 49529793 -90786972 + MLT1A1 LTR MaLR 1 365 0 1339 226 83 65 chr10 49529793 49530169 -90786596 + MLT1D LTR MaLR 116 505 0 472 52 13 13 chr10 49530182 49530259 -90786506 + (CA)n Simple_repeat Simple_repeat 2 78 0 712 204 8 8 chr10 49530321 49530453 -90786312 + FLAM_A SINE Alu 1 132 -1 2275 93 10 3 chr10 49531729 49532030 -90784735 + AluSc SINE Alu 1 303 -6 1451 206 0 14 chr10 49532145 49532436 -90784329 - AluJo SINE Alu -24 288 2 658 143 38 0 chr10 49534382 49534487 -90782278 - MER65A LTR ERV1 -165 280 172 6369 69 13 17 chr10 49534488 49536098 -90780667 - SVA Other Other -723 1386 16 2169 117 3 3 chr10 49536828 49537137 -90779628 - AluSp SINE Alu -4 309 1 503 197 58 15 chr10 49537458 49537595 -90779170 + L1MC4a LINE L1 6033 6175 -1633 485 176 92 17 chr10 49537598 49537717 -90779048 + L1MC4a LINE L1 6271 6398 -1410 923 216 73 5 chr10 49537719 49537923 -90778842 - MLT1F1 LTR MaLR -2 565 348 1330 163 5 5 chr10 49537931 49538146 -90778619 - AluJb SINE Alu -97 215 1 249 253 22 44 chr10 49538148 49538239 -90778526 + L1MC4a LINE L1 7236 7324 -484 827 164 0 27 chr10 49538714 49538860 -90777905 - FLAM_C SINE Alu 0 143 2 26 30 0 0 chr10 49539677 49539710 -90777055 + AT_rich Low_complexity Low_complexity 1 33 0 812 89 0 0 chr10 49539856 49539957 -90776808 + AluY SINE Alu 178 278 -33 1383 93 6 0 chr10 49539957 49540140 -90776625 + AluY SINE Alu 117 300 -11 670 242 0 8 chr10 49540673 49540805 -90775960 + FLAM_A SINE Alu 1 131 -2 1526 186 3 30 chr10 49540808 49541103 -90775662 + AluJo SINE Alu 1 287 -25 383 330 200 18 chr10 49541263 49541648 -90775117 - L2 LINE L2 -5 3308 2854 519 161 54 0 chr10 49541656 49541749 -90775016 + LTR47A LTR ERVL 5 102 -350 2298 103 0 0 chr10 49541760 49542062 -90774703 - AluSx SINE Alu -10 302 1 1337 162 28 28 chr10 49542063 49542310 -90774455 + LTR47A LTR ERVL 206 452 0 3193 155 21 50 chr10 49542310 49542915 -90773850 + L1MB2 LINE L1 5582 6169 -2 893 221 14 29 chr10 49542926 49543134 -90773631 - AluSg/x SINE Alu -12 298 94 188 297 88 33 chr10 49546203 49546239 -90770526 + MIR SINE MIR 33 66 -142 1937 143 54 3 chr10 49546239 49546533 -90770232 - AluSx SINE Alu -3 309 1 188 297 88 33 chr10 49546533 49546587 -90770178 + MIR SINE MIR 66 128 -80 186 191 128 0 chr10 49546848 49546895 -90769870 - L2 LINE L2 -214 3058 3006 25 0 0 0 chr10 49547205 49547230 -90769535 + AT_rich Low_complexity Low_complexity 1 25 0 3854 243 80 27 chr10 49547331 49547673 -90769092 + L1M4 LINE L1 3523 3845 -2301 2165 135 7 0 chr10 49547673 49547977 -90768788 + AluSx SINE Alu 1 306 -6 3854 243 80 27 chr10 49547977 49548555 -90768210 + L1M4 LINE L1 3845 4391 -1755 2197 104 3 7 chr10 49548555 49548852 -90767913 + AluSq SINE Alu 1 296 -17 3854 243 80 27 chr10 49548852 49549057 -90767708 + L1M4 LINE L1 4391 4584 -1562 1999 195 65 18 chr10 49549057 49549503 -90767262 + MLT1C LTR MaLR 1 467 0 3854 243 80 27 chr10 49549503 49549812 -90766953 + L1M4 LINE L1 4584 5095 -1051 1232 143 0 63 chr10 49549921 49550144 -90766621 + AluJo SINE Alu 2 210 -102 758 186 32 0 chr10 49550145 49550269 -90766496 + AluJo SINE Alu 9 136 -176 928 133 6 25 chr10 49550269 49550427 -90766338 + AluYb8 SINE Alu 1 155 -163 200 322 35 23 chr10 49552566 49552653 -90764112 - MIR3 SINE MIR -31 177 90 724 222 134 0 chr10 49552839 49553010 -90763755 - MLT1A2 LTR MaLR 0 374 181 1537 167 24 3 chr10 49553021 49553309 -90763456 - AluSp SINE Alu -9 304 11 2182 70 21 7 chr10 49553916 49554200 -90762565 + AluY SINE Alu 1 288 -23 189 0 0 0 chr10 49554204 49554225 -90762540 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 243 0 0 0 chr10 49554328 49554355 -90762410 + (TG)n Simple_repeat Simple_repeat 2 28 0 1090 151 15 34 chr10 49554687 49554892 -90761873 - AluJo SINE Alu -8 304 104 349 272 106 64 chr10 49554985 49555191 -90761574 - L1M4 LINE L1 -1287 4859 4636 1904 129 0 78 chr10 49555191 49555523 -90761242 - AluSq SINE Alu -6 307 2 349 272 106 64 chr10 49555523 49555599 -90761166 - L1M4 LINE L1 -1510 4636 4565 271 224 13 26 chr10 49555645 49555721 -90761044 - L1ME LINE L1 -444 5677 5603 190 0 67 0 chr10 49555917 49555947 -90760818 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 584 225 159 28 chr10 49556128 49556417 -90760348 + L1MC4 LINE L1 7641 7967 -75 2213 93 7 23 chr10 49556451 49556753 -90760012 + AluSc SINE Alu 1 297 -12 4990 141 28 39 chr10 49556844 49557789 -90758976 + L1MB2 LINE L1 4118 5051 -1095 1184 127 27 35 chr10 49557775 49558111 -90758654 + L1MB2 LINE L1 5650 6171 0 * 313 235 73 50 chr10 49558194 49558373 -90758392 + L1M4 LINE L1 3686 3868 -2278 1770 173 86 43 chr10 49558393 49558568 -90758197 - L1M4 LINE L1 -3215 2931 2765 2078 145 0 3 chr10 49558568 49558864 -90757901 + AluSx SINE Alu 6 300 -12 1770 173 86 43 chr10 49558864 49559156 -90757609 - L1M4 LINE L1 -3381 2765 2444 2175 116 3 0 chr10 49559268 49559569 -90757196 + AluSx SINE Alu 1 302 -10 1178 89 0 0 chr10 49559679 49559825 -90756940 + AluSg SINE Alu 1 146 -164 537 217 117 8 chr10 49560043 49560163 -90756602 - FLAM_A SINE Alu 0 133 1 453 292 65 48 chr10 49560369 49560766 -90755999 - L1M4 LINE L1 -3558 2588 2185 2215 110 3 16 chr10 49561205 49561515 -90755250 - AluSg SINE Alu -4 306 1 331 315 70 29 chr10 49561713 49561737 -90755028 - HAL1b LINE L1 -778 570 548 693 186 29 0 chr10 49561737 49561877 -90754888 - L1MA4 LINE L1 -6 6294 6151 331 315 70 29 chr10 49561877 49562236 -90754529 - HAL1b LINE L1 -800 548 171 2357 77 3 13 chr10 49562238 49562551 -90754214 - AluY SINE Alu -1 310 1 815 136 40 0 chr10 49562599 49562724 -90754041 - FRAM SINE Alu -2 174 45 2163 77 24 7 chr10 49562851 49563138 -90753627 - AluY SINE Alu -19 292 1 1770 183 0 7 chr10 49563709 49564009 -90752756 - AluJb SINE Alu -14 298 1 1537 185 24 20 chr10 49564313 49564605 -90752160 + THE1B LTR MaLR 72 364 0 583 366 44 7 chr10 49564685 49564980 -90751785 - L2 LINE L2 -2067 1247 942 2144 78 45 39 chr10 49564989 49565298 -90751467 + AluY SINE Alu 1 311 0 2045 230 50 26 chr10 49565316 49565881 -90750884 + L1ME3 LINE L1 5566 6143 -19 1031 228 57 24 chr10 49565944 49566277 -90750488 + L1ME LINE L1 5254 5597 -573 26 50 0 0 chr10 49566295 49566335 -90750430 + AT_rich Low_complexity Low_complexity 1 40 0 2234 92 7 7 chr10 49567297 49567589 -90749176 - AluSc SINE Alu -17 292 1 254 250 171 14 chr10 49567835 49567975 -90748790 + L2 LINE L2 3147 3308 -5 565 266 119 23 chr10 49568521 49568739 -90748026 - MIR SINE MIR -12 250 12 237 178 0 0 chr10 49569069 49569114 -90747651 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 2563 53 0 3 chr10 49569125 49569427 -90747338 + AluY SINE Alu 1 301 -10 22 0 0 0 chr10 49569634 49569656 -90747109 + AT_rich Low_complexity Low_complexity 1 22 0 595 96 7 104 chr10 49569710 49569845 -90746920 - AluSp/q SINE Alu -6 307 186 2211 103 0 7 chr10 49570593 49570893 -90745872 + AluSx SINE Alu 1 298 -14 5894 199 67 17 chr10 49570893 49572790 -90743975 - L1MB8 LINE L1 -10 6168 4119 2067 140 0 13 chr10 49572790 49573104 -90743661 - AluSx SINE Alu -2 310 1 5894 199 67 17 chr10 49573104 49573631 -90743134 - L1MB8 LINE L1 -2059 4119 3620 2297 89 0 15 chr10 49573608 49573933 -90742832 + L1PA6 LINE L1 1878 2197 -3949 * 12637 64 12 1 chr10 49573930 49575550 -90741215 + L1PA6 LINE L1 2685 4322 -1824 7328 58 12 2 chr10 49575550 49575562 -90741203 + L1PA6 LINE L1 4844 4854 -1300 2367 76 0 41 chr10 49575562 49575876 -90740889 - AluSp SINE Alu -12 301 1 7328 58 12 2 chr10 49575876 49577174 -90739591 + L1PA6 LINE L1 4854 6154 0 306 297 111 80 chr10 49577803 49578153 -90738612 + L1M2 LINE L1 834 1194 -5655 218 250 33 0 chr10 49578568 49578628 -90738137 + MIR SINE MIR 103 164 -98 232 329 100 12 chr10 49579451 49579621 -90737144 - MIR SINE MIR -33 229 45 386 207 23 23 chr10 49580287 49580374 -90736391 - MER3 DNA MER1_type -122 87 1 1506 197 69 10 chr10 49580606 49580911 -90735854 + MLT1A1 LTR MaLR 43 365 0 422 347 55 5 chr10 49580914 49581113 -90735652 - L2 LINE L2 -541 2773 2565 1226 165 83 109 chr10 49581136 49581494 -90735271 + MLT1B LTR MaLR 3 350 -40 932 292 124 32 chr10 49581494 49581809 -90734956 + MER2 DNA MER2_type 1 344 -1 4217 209 38 108 chr10 49581842 49583305 -90733460 + MLT1A2-int LTR MaLR 1 1361 -10 1313 188 68 119 chr10 49583314 49583708 -90733057 + MLT1A2 LTR MaLR 1 374 0 346 219 0 0 chr10 49584161 49584225 -90732540 + MER113 DNA MER1_type? 455 518 -3 2307 109 7 0 chr10 49584282 49584584 -90732181 + AluSc SINE Alu 1 304 -5 2172 122 3 0 chr10 49584881 49585177 -90731588 + AluSx SINE Alu 1 297 -15 185 306 141 24 chr10 49585203 49585288 -90731477 - L2 LINE L2 -4 3268 3174 40 83 0 0 chr10 49586137 49586233 -90730532 + AT_rich Low_complexity Low_complexity 1 96 0 186 209 0 0 chr10 49586606 49586649 -90730116 + A-rich Low_complexity Low_complexity 1 43 0 2090 103 51 0 chr10 49587429 49587721 -90729044 + AluSc SINE Alu 1 307 -2 1397 189 4 4 chr10 49587970 49588208 -90728557 + AluJo SINE Alu 9 246 -66 198 0 0 0 chr10 49588208 49588230 -90728535 + (A)n Simple_repeat Simple_repeat 1 22 0 37 52 0 0 chr10 49588376 49588434 -90728331 + AT_rich Low_complexity Low_complexity 1 58 0 1991 117 10 24 chr10 49589662 49589960 -90726805 - AluSg SINE Alu -16 294 1 2051 122 10 14 chr10 49590818 49591112 -90725653 + AluSx SINE Alu 1 293 -19 2318 71 0 0 chr10 49592077 49592386 -90724379 + AluY SINE Alu 1 309 0 204 308 192 8 chr10 49592458 49592578 -90724187 - L2 LINE L2 -1304 2010 1869 1714 222 39 3 chr10 49592741 49593128 -90723637 + L1MB3 LINE L1 4748 5148 -998 3887 144 48 85 chr10 49593546 49594432 -90722333 + L1MB3 LINE L1 5328 6181 -2 642 226 0 0 chr10 49595474 49595589 -90721176 + AluJb SINE Alu 132 246 -66 1662 128 0 0 chr10 49595593 49595819 -90720946 + AluJb SINE Alu 71 296 -16 2544 56 0 7 chr10 49595819 49596123 -90720642 + AluY SINE Alu 1 302 -9 558 163 0 0 chr10 49596241 49596321 -90720444 + FRAM/FAM SINE Alu 4 83 -93 2635 200 37 20 chr10 49598127 49598673 -90718092 + MER68 LTR ERV1 6 560 -2 1888 117 64 0 chr10 49598971 49599237 -90717528 - AluSq SINE Alu -30 283 1 267 133 0 0 chr10 49599525 49599570 -90717195 + (A)n Simple_repeat Simple_repeat 1 45 0 1744 143 57 0 chr10 49599717 49599982 -90716783 - AluJb SINE Alu -24 288 9 219 308 148 30 chr10 49600579 49600816 -90715949 - L2 LINE L2 -276 3037 2769 826 126 94 0 chr10 49600954 49601081 -90715684 - MER85 DNA T2_type 0 139 1 2458 76 0 7 chr10 49601610 49601911 -90714854 + AluY SINE Alu 2 300 -11 1690 114 6 129 chr10 49602143 49602484 -90714281 + AluSx SINE Alu 1 299 -3 2458 64 0 0 chr10 49602788 49603083 -90713682 + AluY SINE Alu 2 296 -15 2497 60 0 7 chr10 49603344 49603643 -90713122 - AluSp SINE Alu -16 297 1 2261 76 24 3 chr10 49604961 49605249 -90711516 - AluSg SINE Alu -16 294 1 1406 157 36 36 chr10 49605379 49605659 -90711106 + AluJo SINE Alu 3 282 -30 312 278 185 25 chr10 49607160 49607322 -90709443 + MIR SINE MIR 57 244 -18 2342 52 28 7 chr10 49608097 49608410 -90708355 - AluY SINE Alu 0 311 1 568 249 133 6 chr10 49609032 49609213 -90707552 - MIR SINE MIR 0 262 59 1437 174 95 8 chr10 49609270 49609534 -90707231 + AluJb SINE Alu 1 287 -15 228 182 0 0 chr10 49609612 49609656 -90707109 + (CA)n Simple_repeat Simple_repeat 2 45 0 1970 163 0 0 chr10 49609846 49610152 -90706613 - AluSx SINE Alu -6 306 1 220 82 197 49 chr10 49610234 49610295 -90706470 + MIR SINE MIR 161 230 -32 1962 139 26 0 chr10 49610683 49610986 -90705779 + AluSq SINE Alu 1 311 -2 2134 114 3 3 chr10 49612853 49613151 -90703614 + AluSg SINE Alu 1 298 -12 188 255 20 39 chr10 49614746 49614797 -90701968 - MER5A DNA MER1_type 0 189 140 797 136 7 79 chr10 49614807 49614947 -90701818 - AluSq/x SINE Alu -179 133 4 207 100 0 0 chr10 49616175 49616205 -90700560 + (ATG)n Simple_repeat Simple_repeat 3 32 0 291 334 75 44 chr10 49616309 49616737 -90700028 - L3 LINE CR1 -39 1538 1098 348 186 0 0 chr10 49616825 49616884 -90699881 - MER5A DNA MER1_type -80 109 51 226 270 149 0 chr10 49617394 49617468 -90699297 + L1MC/D LINE L1 5741 5825 -1983 25 0 0 0 chr10 49617920 49617945 -90698820 + AT_rich Low_complexity Low_complexity 1 25 0 2363 63 0 3 chr10 49617945 49618230 -90698535 - AluY SINE Alu -27 284 1 3412 188 0 30 chr10 49619330 49620026 -90696739 - L1 LINE L1 -1685 4461 3786 2319 91 0 7 chr10 49620026 49620323 -90696442 - AluSg SINE Alu -15 295 1 3412 188 0 30 chr10 49620323 49620348 -90696417 - L1 LINE L1 -2360 3786 3762 3557 201 25 13 chr10 49620349 49621178 -90695587 + L1PB1 LINE L1 4459 5300 -846 2814 104 9 29 chr10 49621178 49621609 -90695156 + L1PB1 LINE L1 5709 6150 -1 3557 201 25 13 chr10 49621609 49621620 -90695145 + L1PB1 LINE L1 5300 5309 -837 1272 149 9 28 chr10 49621732 49621947 -90694818 - AluJo SINE Alu -15 297 87 277 323 70 13 chr10 49622673 49622831 -90693934 + HAL1 LINE L1 576 742 -1765 569 277 82 42 chr10 49622877 49623245 -90693520 + HAL1 LINE L1 821 1293 -1214 260 280 109 23 chr10 49623247 49623422 -90693343 + HAL1 LINE L1 1367 1556 -951 260 377 14 0 chr10 49623489 49623701 -90693064 + HAL1 LINE L1 1696 1910 -597 357 181 56 0 chr10 49624021 49624093 -90692672 + HAL1 LINE L1 2097 2172 -335 2257 114 3 0 chr10 49624261 49624558 -90692207 - AluSx SINE Alu -14 298 1 24 53 0 0 chr10 49624952 49624990 -90691775 + AT_rich Low_complexity Low_complexity 1 38 0 1952 151 0 10 chr10 49625399 49625698 -90691067 - AluY SINE Alu -15 296 1 1896 201 50 22 chr10 49625989 49626170 -90690595 + MSTB LTR MaLR 1 176 -250 2239 127 0 0 chr10 49626170 49626469 -90690296 + AluSx SINE Alu 1 299 -13 1896 201 50 22 chr10 49626469 49626690 -90690075 + MSTB LTR MaLR 176 414 -12 642 179 14 64 chr10 49627705 49627845 -90688920 + FLAM_A SINE Alu 1 133 0 2287 100 0 16 chr10 49628761 49629071 -90687694 - AluSx SINE Alu -7 305 1 234 204 0 0 chr10 49630651 49630695 -90686070 + (CCCTAG)n Simple_repeat Simple_repeat 1 44 0 367 234 28 58 chr10 49631692 49631815 -90684950 - MIR SINE MIR -64 144 27 1778 153 23 72 chr10 49631837 49632056 -90684709 - THE1C LTR MaLR -3 372 144 2024 139 0 0 chr10 49632056 49632336 -90684429 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr10 49632339 49632359 -90684406 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1778 153 23 72 chr10 49632359 49632526 -90684239 - THE1C LTR MaLR -233 142 1 300 111 37 0 chr10 49632579 49632633 -90684132 - AluSp/q SINE Alu 0 303 248 364 230 9 70 chr10 49632633 49632739 -90684026 - L1 LINE L1 -1769 4377 4280 2343 78 27 0 chr10 49632739 49633033 -90683732 - AluSp SINE Alu -11 302 1 364 230 9 70 chr10 49633033 49633062 -90683703 - L1 LINE L1 -1866 4280 4251 307 296 26 65 chr10 49633139 49633333 -90683432 - L1 LINE L1 -945 5201 5016 2263 113 0 0 chr10 49633333 49633635 -90683130 - AluSg SINE Alu -8 302 1 307 296 26 65 chr10 49633635 49633670 -90683095 - L1 LINE L1 -1130 5016 4981 767 210 6 25 chr10 49633699 49633861 -90682904 + MER58A DNA MER1_type 39 197 -27 2327 84 7 0 chr10 49633861 49634157 -90682608 - AluSx SINE Alu -14 298 1 401 260 58 110 chr10 49634788 49635153 -90681612 - L1MC4 LINE L1 -2 8040 7695 246 94 0 0 chr10 49635250 49635282 -90681483 - MER1B DNA MER1_type 0 333 302 1276 111 53 0 chr10 49635300 49635489 -90681276 - MER1B DNA MER1_type -98 199 1 984 284 95 24 chr10 49635538 49636161 -90680604 - L1MC4 LINE L1 -368 7674 7008 1448 146 0 5 chr10 49636165 49636378 -90680387 - AluJb SINE Alu -13 299 88 2187 128 3 0 chr10 49637088 49637392 -90679373 + AluSx SINE Alu 1 305 -7 348 187 101 101 chr10 49638372 49638511 -90678254 + L2 LINE L2 3165 3303 -10 675 243 121 27 chr10 49638563 49639009 -90677756 - MLT1H1 LTR MaLR -7 542 35 2223 125 3 0 chr10 49639750 49640062 -90676703 - AluSq SINE Alu 0 313 1 24 32 0 0 chr10 49640150 49640181 -90676584 + AT_rich Low_complexity Low_complexity 1 31 0 2511 68 0 3 chr10 49640191 49640501 -90676264 + AluY SINE Alu 1 309 -2 2106 127 33 0 chr10 49641290 49641589 -90675176 - AluSx SINE Alu -3 309 1 995 206 19 22 chr10 49641656 49642019 -90674746 - Tigger2 DNA MER2_type -10 2708 1 325 267 193 15 chr10 49642216 49642418 -90674347 + MIR SINE MIR 14 251 -11 1204 242 71 37 chr10 49643665 49644165 -90672600 - MER39 LTR ERV1 -2 682 3 2256 109 7 0 chr10 49644540 49644843 -90671922 + AluSp SINE Alu 1 305 -8 2341 95 3 13 chr10 49644843 49645158 -90671607 + AluSp SINE Alu 1 312 -1 2170 106 10 17 chr10 49645178 49645479 -90671286 + AluSx SINE Alu 1 299 -13 3048 153 21 58 chr10 49645493 49646099 -90670666 - L1MB2 LINE L1 -2 6169 5586 1344 158 28 28 chr10 49646103 49646350 -90670415 - LTR47A LTR ERVL 0 452 206 2296 106 0 0 chr10 49646351 49646653 -90670112 + AluSx SINE Alu 1 302 -10 461 183 54 0 chr10 49646664 49646757 -90670008 - LTR47A LTR ERVL -350 102 5 273 327 205 23 chr10 49646765 49647150 -90669615 + L2 LINE L2 2854 3308 -5 1545 168 4 32 chr10 49647310 49647590 -90669175 - AluJo SINE Alu -25 287 16 613 229 8 8 chr10 49647612 49647743 -90669022 - FLAM_A SINE Alu -2 131 1 1326 95 0 0 chr10 49648273 49648441 -90668324 - AluY SINE Alu -11 300 133 1488 152 0 34 chr10 49648441 49648704 -90668061 - AluY SINE Alu -17 294 41 201 394 0 0 chr10 49648834 49648961 -90667804 + C-rich Low_complexity Low_complexity 1 127 0 27 0 0 0 chr10 49649171 49649198 -90667567 + AT_rich Low_complexity Low_complexity 1 27 0 1992 119 0 69 chr10 49649205 49649344 -90667421 + AluSx SINE Alu 1 148 -164 2533 71 10 7 chr10 49649344 49649654 -90667111 + AluY SINE Alu 1 311 0 1992 119 0 69 chr10 49649654 49649834 -90666931 + AluSx SINE Alu 148 298 -14 599 180 16 16 chr10 49650026 49650148 -90666617 - L1MB7 LINE L1 -19 6165 6044 1902 168 0 0 chr10 49650205 49650497 -90666268 - AluJb SINE Alu -20 292 1 180 0 0 0 chr10 49650987 49651007 -90665758 + (T)n Simple_repeat Simple_repeat 1 20 0 369 200 14 0 chr10 49651483 49651553 -90665212 - MER58 DNA MER1_type -1 2419 2349 2250 104 0 25 chr10 49651908 49652224 -90664541 - AluSx SINE Alu -3 309 2 201 291 18 0 chr10 49653088 49653143 -90663622 - MIR SINE MIR -182 80 25 195 346 77 39 chr10 49653622 49653752 -90663013 - L2 LINE L2 -16 3256 3122 332 152 13 89 chr10 49653912 49653991 -90662774 - L1MC/D LINE L1 -605 5754 5682 2349 85 3 0 chr10 49654173 49654466 -90662299 - AluSx SINE Alu -18 294 1 2164 111 17 7 chr10 49655017 49655314 -90661451 - AluSq SINE Alu -13 300 1 2051 130 0 3 chr10 49655526 49655834 -90660931 - AluSq SINE Alu 0 307 1 25 31 0 0 chr10 49655839 49655871 -90660894 + AT_rich Low_complexity Low_complexity 1 32 0 2248 114 3 7 chr10 49656089 49656395 -90660370 - AluSq SINE Alu -8 305 1 1600 206 58 83 chr10 49656743 49656955 -90659810 - L1MC4 LINE L1 0 8042 7826 2448 97 0 0 chr10 49656955 49657265 -90659500 - AluSg SINE Alu 0 310 1 1912 110 0 0 chr10 49657266 49657520 -90659245 - AluSq SINE Alu -2 311 58 1600 206 58 83 chr10 49657520 49657824 -90658941 - L1MC4 LINE L1 -215 7827 7537 267 270 0 0 chr10 49657820 49657894 -90658871 - L1MC4 LINE L1 -723 7319 7246 * 4035 11 0 0 chr10 49658989 49659437 -90657328 - L1PA2 LINE L1 -1 6154 5707 2305 96 0 10 chr10 49660369 49660662 -90656103 - AluSq SINE Alu -23 290 1 1803 153 27 7 chr10 49660809 49661103 -90655662 - AluSx SINE Alu -12 300 1 2317 116 0 0 chr10 49661497 49661808 -90654957 - AluSx SINE Alu -1 311 1 199 75 132 57 chr10 49661899 49661952 -90654813 + MIR SINE MIR 174 230 -32 22 0 0 0 chr10 49661972 49661994 -90654771 + AT_rich Low_complexity Low_complexity 1 22 0 2211 89 0 68 chr10 49662349 49662673 -90654092 + AluSq SINE Alu 1 302 -11 2133 116 0 3 chr10 49662761 49663055 -90653710 + AluSx SINE Alu 1 293 -19 362 79 16 0 chr10 49663055 49663118 -90653647 + (TA)n Simple_repeat Simple_repeat 2 65 0 2083 124 0 3 chr10 49664914 49665204 -90651561 + AluSg SINE Alu 1 289 -21 185 280 20 20 chr10 49666799 49666849 -90649916 - MER5A DNA MER1_type 0 189 140 778 131 7 58 chr10 49666866 49667003 -90649762 - AluSq/x SINE Alu -180 133 4 195 42 0 0 chr10 49667044 49667068 -90649697 + (T)n Simple_repeat Simple_repeat 1 24 0 228 67 0 0 chr10 49668266 49668296 -90648469 + (ATG)n Simple_repeat Simple_repeat 3 32 0 468 361 50 36 chr10 49668387 49668803 -90647962 - L3 LINE CR1 -24 1553 1132 372 207 219 0 chr10 49668904 49668986 -90647779 - MER5A DNA MER1_type -80 109 10 273 322 91 0 chr10 49669468 49669589 -90647176 + L1MC/D LINE L1 5694 5825 -1983 331 282 74 31 chr10 49670452 49670615 -90646150 - L1MC4 LINE L1 -2 8040 7871 312 284 74 6 chr10 49670647 49670823 -90645942 - L1MC4 LINE L1 -170 7872 7685 225 129 0 0 chr10 49670914 49670945 -90645820 - MER1B DNA MER1_type 0 329 299 * 1198 105 64 41 chr10 49670934 49671153 -90645612 - MER1B DNA MER1_type -73 224 1 292 259 120 44 chr10 49671182 49671816 -90644949 - L1MD3 LINE L1 -221 7774 7010 1425 127 38 0 chr10 49671816 49672028 -90644737 - AluJb SINE Alu -2 310 91 2114 138 3 0 chr10 49672756 49673060 -90643705 + AluSx SINE Alu 1 305 -7 338 261 169 75 chr10 49673818 49674178 -90642587 + L2 LINE L2 2910 3303 -10 499 252 116 19 chr10 49674223 49674672 -90642093 - MLT1H1 LTR MaLR 0 542 35 21 0 0 0 chr10 49675221 49675242 -90641523 + AT_rich Low_complexity Low_complexity 1 21 0 1644 163 59 17 chr10 49675425 49675714 -90641051 - AluSq SINE Alu -12 301 1 22 56 0 0 chr10 49675796 49675832 -90640933 + AT_rich Low_complexity Low_complexity 1 36 0 2375 74 0 3 chr10 49675842 49676141 -90640624 + AluY SINE Alu 1 298 -13 2089 116 34 0 chr10 49676928 49677220 -90639545 - AluSx SINE Alu -10 302 1 953 193 19 25 chr10 49677287 49677651 -90639114 - Tigger2 DNA MER2_type -10 2708 1 365 290 173 5 chr10 49677836 49678050 -90638715 + MIR SINE MIR 2 251 -11 1063 243 53 32 chr10 49679298 49679764 -90637001 - MER39 LTR ERV1 -25 682 21 2243 100 7 7 chr10 49680203 49680494 -90636271 + AluSp SINE Alu 1 291 -22 1496 152 0 0 chr10 49680860 49681090 -90635675 + MER30 DNA MER1_type 1 230 0 431 223 9 171 chr10 49681098 49681159 -90635606 - MER5B DNA MER1_type 0 178 109 2361 95 0 13 chr10 49681159 49681474 -90635291 + AluSx SINE Alu 1 311 -1 431 223 9 171 chr10 49681474 49681623 -90635142 - MER5B DNA MER1_type -69 109 2 207 204 23 0 chr10 49681671 49681715 -90635050 - MER5A DNA MER1_type -80 109 65 2379 77 0 3 chr10 49682337 49682636 -90634129 - AluY SINE Alu -13 298 1 2387 83 0 7 chr10 49683177 49683477 -90633288 + AluSg SINE Alu 1 298 -12 794 294 41 5 chr10 49683941 49684162 -90632603 + MIR SINE MIR 15 243 -19 2390 83 0 0 chr10 49684303 49684604 -90632161 + AluSg SINE Alu 1 301 -9 3323 170 17 3 chr10 49684956 49685604 -90631161 + L1MB7 LINE L1 5482 6138 -46 1718 172 14 10 chr10 49685653 49685949 -90630816 + AluJo SINE Alu 1 297 -15 268 143 0 0 chr10 49685972 49686021 -90630744 + L1MB8 LINE L1 6130 6178 0 388 158 0 13 chr10 49686919 49686995 -90629770 + L1MB3 LINE L1 5799 5873 -310 207 0 0 0 chr10 49687111 49687134 -90629631 + (A)n Simple_repeat Simple_repeat 1 23 0 1710 155 22 51 chr10 49688423 49688558 -90628207 + AluJb SINE Alu 1 138 -174 2261 84 0 16 chr10 49688558 49688866 -90627899 + AluY SINE Alu 1 303 -8 1710 155 22 51 chr10 49688866 49689046 -90627719 + AluJb SINE Alu 138 307 -5 2091 207 47 4 chr10 49689053 49689618 -90627147 + L1ME LINE L1 5211 5799 -365 995 126 0 0 chr10 49689618 49689753 -90627012 - AluSq/x SINE Alu -176 136 2 25 0 0 0 chr10 49690114 49690139 -90626626 + AT_rich Low_complexity Low_complexity 1 25 0 470 79 0 0 chr10 49690481 49690544 -90626221 - Alu SINE Alu -255 63 1 225 247 74 0 chr10 49690550 49690631 -90626134 - L1MC5 LINE L1 -32 7929 7843 2203 116 10 0 chr10 49690639 49690931 -90625834 + AluSx SINE Alu 14 308 -4 422 21 0 0 chr10 49690931 49690979 -90625786 + (TA)n Simple_repeat Simple_repeat 2 49 0 2101 124 0 0 chr10 49691217 49691538 -90625227 - AluY SINE Alu 0 321 1 279 288 24 88 chr10 49692025 49692150 -90624615 + L2 LINE L2 3155 3271 -1 434 221 79 0 chr10 49692917 49693044 -90623721 + L1MDa LINE L1 40 176 -6364 4980 194 91 31 chr10 49693056 49694547 -90622218 + L1MDa LINE L1 805 2384 -4156 1389 218 56 119 chr10 49694804 49695377 -90621388 + L1MD2 LINE L1 5706 6242 0 951 117 0 52 chr10 49695385 49695539 -90621226 + FRAM SINE Alu 20 165 -11 22 0 0 0 chr10 49695577 49695599 -90621166 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr10 49695660 49695700 -90621065 + AT_rich Low_complexity Low_complexity 1 40 0 483 238 128 38 chr10 49695766 49696056 -90620709 - HAL1 LINE L1 -234 2273 1958 304 323 81 37 chr10 49696327 49696488 -90620277 + MIR3 SINE MIR 16 183 -25 397 62 31 0 chr10 49697444 49697509 -90619256 + (GA)n Simple_repeat Simple_repeat 2 68 0 1178 138 0 0 chr10 49697829 49697989 -90618776 - AluSg/x SINE Alu -23 289 130 1693 123 25 4 chr10 49697996 49698239 -90618526 - AluSx SINE Alu -59 253 6 2123 184 128 35 chr10 49698291 49698742 -90618023 - MLT1F1 LTR MaLR -3 564 58 2169 125 0 7 chr10 49698742 49699047 -90617718 - AluSq SINE Alu -6 307 5 2123 184 128 35 chr10 49699047 49699111 -90617654 - MLT1F1 LTR MaLR -509 58 1 3161 121 103 10 chr10 49701192 49701979 -90614786 - MER4D LTR ERV1 0 779 1 21 0 0 0 chr10 49702345 49702366 -90614399 + AT_rich Low_complexity Low_complexity 1 21 0 497 306 70 21 chr10 49702980 49703166 -90613599 - MIR SINE MIR -48 214 20 2351 106 0 6 chr10 49703928 49704240 -90612525 - AluSx SINE Alu -2 310 1 3339 217 83 7 chr10 49704242 49705156 -90611609 - L1MC4a LINE L1 -179 7629 6646 21 0 0 0 chr10 49705624 49705645 -90611120 + AT_rich Low_complexity Low_complexity 1 21 0 773 185 0 0 chr10 49706120 49706239 -90610526 - FLAM_A SINE Alu -14 119 1 705 287 88 37 chr10 49706239 49706788 -90609977 - L2 LINE L2 -242 3030 2447 247 264 0 0 chr10 49706909 49706962 -90609803 + L2 LINE L2 3219 3271 -1 295 333 88 18 chr10 49706967 49707081 -90609684 - MIR SINE MIR -66 142 21 2357 87 0 3 chr10 49707694 49708003 -90608762 - AluY SINE Alu -3 308 1 28 0 0 0 chr10 49708003 49708031 -90608734 + AT_rich Low_complexity Low_complexity 1 28 0 480 271 35 79 chr10 49708326 49708529 -90608236 - MIR SINE MIR -68 194 1 244 305 19 0 chr10 49710297 49710402 -90606363 + CT-rich Low_complexity Low_complexity 2 108 0 424 309 8 0 chr10 49712387 49712510 -90604255 + MIR SINE MIR 79 202 -60 2167 102 0 7 chr10 49712982 49713277 -90603488 + AluSg1 SINE Alu 1 293 -16 310 143 24 71 chr10 49713782 49713866 -90602899 - HsTC2 DNA Tc2 0 1898 1819 344 287 72 49 chr10 49713915 49714180 -90602585 + L1MEd LINE L1 367 637 -5482 374 218 20 20 chr10 49714181 49714282 -90602483 - HsTC2 DNA Tc2 -1794 104 4 393 22 0 0 chr10 49715788 49715834 -90600931 + (TG)n Simple_repeat Simple_repeat 2 47 0 327 344 126 16 chr10 49716017 49716200 -90600565 - L3 LINE CR1 -70 1507 1305 452 321 84 57 chr10 49717131 49717536 -90599229 - L3 LINE CR1 -119 1458 1043 598 236 169 10 chr10 49718497 49718692 -90598073 + MIR SINE MIR 3 228 -34 396 0 0 0 chr10 49719163 49719207 -90597558 + (CA)n Simple_repeat Simple_repeat 2 45 0 200 382 42 37 chr10 49721808 49721999 -90594766 + L2 LINE L2 2553 2744 -570 304 318 164 0 chr10 49722319 49722429 -90594336 + L2 LINE L2 3137 3264 -8 252 0 0 0 chr10 49722921 49722949 -90593816 + (TG)n Simple_repeat Simple_repeat 1 28 0 2471 68 3 0 chr10 49724244 49724539 -90592226 - AluSp SINE Alu -16 297 2 2267 102 0 0 chr10 49724788 49725082 -90591683 + AluSx SINE Alu 1 294 -18 6339 202 60 22 chr10 49725710 49727352 -90589413 - L1M4 LINE L1 -4833 1709 5 2410 61 7 10 chr10 49727930 49728226 -90588539 + AluY SINE Alu 1 295 -16 2159 126 0 3 chr10 49728397 49728707 -90588058 + AluY SINE Alu 1 309 -2 261 274 91 62 chr10 49730844 49731030 -90585735 - MIR SINE MIR -56 206 17 1578 195 13 17 chr10 49731228 49731530 -90585235 - AluJo SINE Alu -11 301 1 259 196 0 0 chr10 49731538 49731584 -90585181 - L2 LINE L2 -90 3182 3137 377 140 80 20 chr10 49731589 49731689 -90585076 - L1MA10 LINE L1 -1 6333 6228 360 173 232 0 chr10 49731701 49731869 -90584896 - L1M4 LINE L1 -826 5320 5114 829 225 125 41 chr10 49731870 49732051 -90584714 - L1M4 LINE L1 -1378 4768 4604 2012 61 4 0 chr10 49732051 49732296 -90584469 - AluSp SINE Alu -21 292 47 829 225 125 41 chr10 49732296 49732531 -90584234 - L1M4 LINE L1 -1542 4604 4317 2273 103 0 7 chr10 49732875 49733185 -90583580 - AluSc SINE Alu -1 308 1 361 150 0 0 chr10 49733218 49733278 -90583487 - L1MC4 LINE L1 -15 8027 7968 3470 200 112 52 chr10 49733278 49734460 -90582305 - L1MC4 LINE L1 -19 8023 6771 309 51 0 0 chr10 49734475 49734514 -90582251 + (CA)n Simple_repeat Simple_repeat 2 40 0 862 246 49 4 chr10 49734514 49734758 -90582007 - L1MC4 LINE L1 -1434 6608 6354 1010 281 45 24 chr10 49734762 49735182 -90581583 - L1ME2 LINE L1 -10 6154 5726 495 214 10 0 chr10 49735206 49735309 -90581456 + MLT2C1 LTR ERVL 13 116 -281 2052 142 10 0 chr10 49735341 49735636 -90581129 - AluSx SINE Alu -14 298 1 1035 78 8 0 chr10 49735971 49736100 -90580665 - AluSq/x SINE Alu -182 130 1 1862 145 14 24 chr10 49736108 49736398 -90580367 - AluJo SINE Alu -20 292 6 272 225 0 0 chr10 49736421 49736501 -90580264 - HAL1 LINE L1 -157 2350 2271 341 301 110 23 chr10 49736571 49736744 -90580021 - MIR SINE MIR -55 207 20 2407 93 3 3 chr10 49737153 49737466 -90579299 + AluSp SINE Alu 1 313 0 1585 167 50 37 chr10 49737657 49737956 -90578809 - AluJo SINE Alu -9 303 1 2374 100 0 0 chr10 49738259 49738568 -90578197 - AluSc SINE Alu 0 309 1 354 326 40 30 chr10 49738568 49738793 -90577972 + L2 LINE L2 2773 3052 -261 1880 89 0 4 chr10 49738962 49739199 -90577566 - AluSp SINE Alu -15 298 63 440 82 33 0 chr10 49739199 49739260 -90577505 + AluSg/x SINE Alu 218 280 -29 186 103 0 0 chr10 49739262 49739291 -90577474 + (ACATG)n Simple_repeat Simple_repeat 5 33 0 257 150 0 0 chr10 49739325 49739365 -90577400 + Alu SINE Alu 245 284 -16 243 75 38 75 chr10 49739365 49739445 -90577320 + (AAATG)n Simple_repeat Simple_repeat 1 77 0 266 125 0 0 chr10 49739459 49739499 -90577266 + Alu SINE Alu 244 283 -17 297 51 0 0 chr10 49739499 49739538 -90577227 + (ACATG)n Simple_repeat Simple_repeat 5 43 0 239 231 0 0 chr10 49739583 49739635 -90577130 + AluJ/monomer SINE Alu 244 295 -6 227 167 0 24 chr10 49739676 49739718 -90577047 + Alu SINE Alu 244 284 -16 262 143 0 0 chr10 49739759 49739801 -90576964 + Alu SINE Alu 244 285 -16 356 57 76 57 chr10 49739801 49739906 -90576859 + (AAATG)n Simple_repeat Simple_repeat 1 107 0 2248 111 7 0 chr10 49739983 49740290 -90576475 + AluSq SINE Alu 2 310 -3 1705 140 54 11 chr10 49740387 49740666 -90576099 - AluJb SINE Alu -21 291 1 288 185 0 15 chr10 49741396 49741461 -90575304 - Charlie8 DNA MER1_type -2266 151 88 2223 113 0 28 chr10 49742002 49742322 -90574443 + AluY SINE Alu 1 311 0 911 190 0 22 chr10 49742336 49742515 -90574250 + FRAM SINE Alu 1 175 -1 693 243 24 36 chr10 49742558 49742809 -90573956 - L1ME3A LINE L1 -9 6161 5914 398 228 40 40 chr10 49742814 49742963 -90573802 - LTR16C LTR ERVL -1 490 342 1912 159 0 7 chr10 49742963 49743265 -90573500 + AluSq SINE Alu 1 300 -13 893 141 15 0 chr10 49743268 49743403 -90573362 - FLAM_C SINE Alu -4 139 3 2145 123 3 0 chr10 49743419 49743719 -90573046 - AluSp SINE Alu -12 301 1 30 45 0 0 chr10 49744968 49745012 -90571753 + AT_rich Low_complexity Low_complexity 1 44 0 2337 116 0 0 chr10 49745154 49745465 -90571300 + AluY SINE Alu 1 311 0 1092 123 14 55 chr10 49745972 49746024 -90570741 + L1MA4A LINE L1 6090 6143 -160 2092 120 0 46 chr10 49746024 49746349 -90570416 + AluSx SINE Alu 1 310 -2 1092 123 14 55 chr10 49746349 49746515 -90570250 + L1MA4A LINE L1 6143 6299 -4 237 250 33 22 chr10 49746962 49747054 -90569711 - L1P LINE L1 -759 5397 5305 304 261 45 101 chr10 49747074 49747272 -90569493 - L1M4 LINE L1 -913 5233 5052 1437 142 139 36 chr10 49747272 49747570 -90569195 + MLT1A1 LTR MaLR 1 338 -27 2259 116 0 0 chr10 49747570 49747873 -90568892 - AluSx SINE Alu -9 303 1 1437 142 139 36 chr10 49747873 49747905 -90568860 + MLT1A1 LTR MaLR 338 365 0 304 261 45 101 chr10 49747905 49747974 -90568791 - L1M4 LINE L1 -1094 5052 4981 2639 68 12 0 chr10 49749158 49749498 -90567267 - LTR14A LTR ERVK 0 344 1 961 268 137 0 chr10 49749744 49750132 -90566633 - LTR33 LTR ERVL -1 520 80 2033 136 0 0 chr10 49750249 49750536 -90566229 - AluSq SINE Alu -26 287 1 219 69 0 0 chr10 49750603 49750632 -90566133 + (GGA)n Simple_repeat Simple_repeat 2 30 0 282 284 42 0 chr10 49751263 49751358 -90565407 - L1MD3 LINE L1 -57 7938 7840 22 56 0 0 chr10 49751430 49751466 -90565299 + AT_rich Low_complexity Low_complexity 1 36 0 1419 240 45 30 chr10 49751471 49751962 -90564803 - L1MC4a LINE L1 -151 7657 7160 2110 123 10 0 chr10 49751976 49752255 -90564510 + AluSp SINE Alu 1 285 -28 315 0 0 0 chr10 49752255 49752290 -90564475 + (CA)n Simple_repeat Simple_repeat 2 36 0 2110 123 10 0 chr10 49752290 49752311 -90564454 + AluSp SINE Alu 285 304 -9 828 224 9 22 chr10 49752311 49752534 -90564231 + AluSp SINE Alu 1 220 -93 754 98 0 0 chr10 49752675 49752777 -90563988 + AluY SINE Alu 191 292 -19 220 276 134 31 chr10 49752803 49752930 -90563835 + MIR SINE MIR 74 213 -49 1474 174 111 0 chr10 49753105 49753375 -90563390 + AluJb SINE Alu 1 300 -12 1071 154 173 10 chr10 49753406 49753614 -90563151 + AluJb SINE Alu 54 295 -17 2463 79 0 0 chr10 49754024 49754328 -90562437 + AluY SINE Alu 1 304 -7 8492 193 104 27 chr10 49754445 49755610 -90561155 + Cheshire DNA MER1_type 2 1076 -1344 1773 152 48 0 chr10 49755610 49755899 -90560866 - AluJb SINE Alu -5 307 5 8492 193 104 27 chr10 49755899 49756980 -90559785 + Cheshire DNA MER1_type 1076 2420 0 260 323 8 69 chr10 49757173 49757303 -90559462 - L2 LINE L2 -241 3031 2910 263 265 15 15 chr10 49757565 49757633 -90559132 - L3 LINE CR1 -241 1336 1269 914 244 104 9 chr10 49757644 49758042 -90558723 + MLT1E LTR MaLR 8 518 -75 21 0 0 0 chr10 49758060 49758081 -90558684 + AT_rich Low_complexity Low_complexity 1 21 0 181 343 136 59 chr10 49758114 49758400 -90558365 + L2 LINE L2 2959 3266 -6 195 296 34 3 chr10 49758527 49758601 -90558164 - MIR SINE MIR -35 173 94 1393 60 0 18 chr10 49759622 49759790 -90556975 + AluSc SINE Alu 1 165 -144 505 178 0 0 chr10 49760734 49760824 -90555941 - AluSg/x SINE Alu -4 306 217 1302 122 80 0 chr10 49760824 49761012 -90555753 - AluSg/x SINE Alu -44 268 66 1143 93 0 0 chr10 49761020 49761171 -90555594 + AluSg/x SINE Alu 154 304 -6 317 222 244 34 chr10 49761942 49762118 -90554647 + L2 LINE L2 3099 3311 -2 382 271 26 94 chr10 49762893 49763085 -90553680 - MIR3 SINE MIR -27 181 3 182 225 70 42 chr10 49763830 49763901 -90552864 - L3 LINE CR1 -2 1575 1503 5025 136 29 8 chr10 49763979 49764965 -90551800 + L1PA16 LINE L1 5162 6166 0 2375 86 0 0 chr10 49764974 49765266 -90551499 + AluSc SINE Alu 1 292 -17 5206 189 18 27 chr10 49765309 49766585 -90550180 + L1 LINE L1 2304 3590 -2556 2289 71 11 0 chr10 49766585 49766867 -90549898 + AluY SINE Alu 1 285 -26 285 29 0 0 chr10 49766867 49766901 -90549864 + (GAGAA)n Simple_repeat Simple_repeat 4 37 0 5206 189 18 27 chr10 49766901 49766953 -90549812 + L1 LINE L1 3588 3621 -2525 770 110 55 0 chr10 49766953 49767062 -90549703 + AluSg SINE Alu 1 115 -195 630 160 0 0 chr10 49767060 49767166 -90549599 + AluJb SINE Alu 206 311 -1 * 240 146 0 0 chr10 49767253 49767294 -90549471 + L1ME1 LINE L1 5329 5369 -975 1573 206 34 34 chr10 49767296 49767650 -90549115 + MLT1A1 LTR MaLR 1 354 -11 1711 148 4 8 chr10 49767650 49767913 -90548852 - AluJo SINE Alu -12 300 39 3181 225 26 32 chr10 49767928 49768693 -90548072 + L1ME1 LINE L1 5361 6122 -44 1764 212 80 16 chr10 49768693 49769132 -90547633 + MLT1C LTR MaLR 1 467 0 3181 225 26 32 chr10 49769132 49769175 -90547590 + L1ME1 LINE L1 6122 6164 -2 26 30 0 0 chr10 49769314 49769347 -90547418 + AT_rich Low_complexity Low_complexity 1 33 0 1044 279 17 0 chr10 49769483 49769770 -90546995 + L1MCb LINE L1 1 292 -5753 3423 185 58 64 chr10 49769775 49770531 -90546234 + L1MCb LINE L1 521 1280 -5284 2224 59 55 3 chr10 49770531 49770821 -90545944 + AluY SINE Alu 1 305 -6 3423 185 58 64 chr10 49770821 49770845 -90545920 + L1MCb LINE L1 1280 1303 -5261 696 221 0 0 chr10 49770845 49770972 -90545793 + FLAM_A SINE Alu 5 131 -2 3423 185 58 64 chr10 49770972 49771712 -90545053 + L1MCb LINE L1 1303 2031 -4533 415 141 0 0 chr10 49771713 49771777 -90544988 + AluJ/FLAM SINE Alu 2 65 -247 575 183 196 7 chr10 49771780 49771933 -90544832 - MIR SINE MIR -48 214 33 2194 116 3 0 chr10 49772295 49772598 -90544167 + AluY SINE Alu 1 304 -7 1982 120 9 47 chr10 49774507 49774824 -90541941 + AluSg SINE Alu 1 305 -5 340 256 0 13 chr10 49775617 49775695 -90541070 + Charlie1a DNA MER1_type 1 77 -1378 2349 105 0 0 chr10 49775696 49776000 -90540765 - AluSq SINE Alu -9 304 1 2430 229 186 22 chr10 49776066 49776428 -90540337 + Charlie1a DNA MER1_type 86 388 -2373 1215 179 101 30 chr10 49776428 49776696 -90540069 + AluJo SINE Alu 1 287 -15 2430 229 186 22 chr10 49776696 49777173 -90539592 + Charlie1a DNA MER1_type 388 786 -1975 2208 115 3 0 chr10 49777173 49777468 -90539297 - AluSx SINE Alu -12 300 5 2430 229 186 22 chr10 49777468 49777482 -90539283 + Charlie1a DNA MER1_type 786 796 -1965 2061 137 0 0 chr10 49777482 49777781 -90538984 - AluY SINE Alu -12 299 1 2430 229 186 22 chr10 49777781 49777947 -90538818 + Charlie1a DNA MER1_type 796 1274 -181 755 244 6 0 chr10 49777963 49778119 -90538646 + MER20 DNA MER1_type 60 216 -3 236 244 59 30 chr10 49778119 49778254 -90538511 + Charlie1a DNA MER1_type 1302 1440 -15 640 277 0 0 chr10 49778730 49778889 -90537876 - FRAM SINE Alu -6 160 2 1246 81 0 0 chr10 49778919 49779068 -90537697 - AluSp SINE Alu -35 278 130 285 156 86 117 chr10 49779217 49779345 -90537420 - MIR3 SINE MIR -1 207 84 552 246 46 29 chr10 49779383 49779558 -90537207 - MER5B DNA MER1_type 0 178 1 2376 80 0 3 chr10 49781396 49781697 -90535068 + AluY SINE Alu 2 301 -10 2331 120 0 0 chr10 49781865 49782173 -90534592 - AluSx SINE Alu -4 308 1 230 266 77 70 chr10 49782468 49782611 -90534154 + LTR59 LTR ERV1 334 477 -120 207 0 0 0 chr10 49783462 49783485 -90533280 + (T)n Simple_repeat Simple_repeat 1 23 0 231 342 0 0 chr10 49783526 49783602 -90533163 - L1ME LINE L1 -339 5823 5748 * 424 158 0 13 chr10 49783601 49783677 -90533088 - L1MB3 LINE L1 -310 5873 5799 290 143 0 0 chr10 49784575 49784624 -90532141 - L1MB8 LINE L1 0 6178 6130 1706 172 14 10 chr10 49784647 49784943 -90531822 - AluJo SINE Alu -15 297 1 3610 171 17 3 chr10 49784990 49785640 -90531125 - L1MB7 LINE L1 -44 6140 5482 2416 83 0 0 chr10 49785992 49786293 -90530472 - AluSg SINE Alu -9 301 1 718 294 41 5 chr10 49786434 49786655 -90530110 - MIR SINE MIR -19 243 15 228 239 60 30 chr10 49788887 49788954 -90527811 + MIR SINE MIR 82 150 -58 2528 90 0 0 chr10 49789037 49789347 -90527418 - AluSx SINE Alu 0 312 3 371 252 103 80 chr10 49789351 49789546 -90527219 - MER113 DNA MER1_type? -205 316 110 653 203 0 36 chr10 49789546 49789684 -90527081 + FLAM_A SINE Alu 1 133 0 371 252 103 80 chr10 49789684 49789790 -90526975 - MER113 DNA MER1_type? -411 110 8 313 261 23 34 chr10 49789801 49789889 -90526876 + MIR SINE MIR 64 150 -58 2326 114 0 0 chr10 49789962 49790269 -90526496 - AluSx SINE Alu -5 307 1 199 75 132 57 chr10 49790360 49790413 -90526352 + MIR SINE MIR 174 230 -32 22 0 0 0 chr10 49790433 49790455 -90526310 + AT_rich Low_complexity Low_complexity 1 22 0 2232 92 0 67 chr10 49790810 49791138 -90525627 + AluSq SINE Alu 1 306 -7 2140 113 0 3 chr10 49791224 49791517 -90525248 + AluSx SINE Alu 1 292 -20 512 81 11 0 chr10 49791517 49791604 -90525161 + (TA)n Simple_repeat Simple_repeat 2 89 0 2142 117 0 3 chr10 49793397 49793687 -90523078 + AluSg SINE Alu 1 289 -21 778 131 7 58 chr10 49795348 49795485 -90521280 - AluSq/x SINE Alu -179 133 4 228 67 0 0 chr10 49796731 49796761 -90520004 + (ATG)n Simple_repeat Simple_repeat 3 32 0 338 361 50 36 chr10 49796852 49797268 -90519497 - L3 LINE CR1 -24 1553 1132 348 186 0 0 chr10 49797369 49797428 -90519337 - MER5A DNA MER1_type -80 109 51 359 319 135 11 chr10 49797923 49798108 -90518657 + L1MC4a LINE L1 5679 5886 -1922 1539 152 0 0 chr10 49798591 49798821 -90517944 + MER30 DNA MER1_type 1 230 0 388 232 11 138 chr10 49798833 49798890 -90517875 - MER5B DNA MER1_type -4 174 111 2363 98 0 13 chr10 49798890 49799206 -90517559 + AluSx SINE Alu 1 312 0 388 232 11 138 chr10 49799206 49799329 -90517436 - MER5B DNA MER1_type -67 111 17 2403 77 0 3 chr10 49800067 49800365 -90516400 - AluY SINE Alu -14 297 1 2461 85 0 7 chr10 49800906 49801213 -90515552 + AluSg SINE Alu 1 305 -5 717 303 41 5 chr10 49801677 49801898 -90514867 + MIR SINE MIR 15 243 -19 2298 90 0 0 chr10 49802044 49802333 -90514432 + AluSg SINE Alu 1 289 -21 3587 172 17 3 chr10 49802685 49803335 -90513430 + L1MB7 LINE L1 5482 6140 -44 1517 180 60 11 chr10 49803380 49803663 -90513102 + AluJo SINE Alu 1 297 -15 290 143 0 0 chr10 49803686 49803735 -90513030 + L1MB8 LINE L1 6130 6178 0 424 158 0 13 chr10 49804632 49804708 -90512057 + L1MB3 LINE L1 5799 5873 -310 243 259 77 70 chr10 49805689 49805832 -90510933 - LTR59 LTR ERV1 -120 477 334 2326 123 0 0 chr10 49806127 49806436 -90510329 + AluSx SINE Alu 1 309 -3 2382 87 3 3 chr10 49806607 49806907 -90509858 - AluSg SINE Alu -10 300 1 372 242 134 14 chr10 49807440 49807663 -90509102 - L1MDa LINE L1 -3958 2582 2333 1370 141 14 14 chr10 49808396 49808616 -90508149 - AluY SINE Alu -91 220 1 283 313 35 9 chr10 49810843 49810958 -90505807 + L2 LINE L2 3169 3286 -27 296 225 75 0 chr10 49810972 49811052 -90505713 + HsTC2 DNA Tc2 3 88 -1810 824 265 5 5 chr10 49812155 49812340 -90504425 - MER58A DNA MER1_type 0 224 40 2303 113 0 0 chr10 49812342 49812642 -90504123 + AluSc SINE Alu 1 300 -9 6403 195 57 49 chr10 49812652 49813394 -90503371 + L1MB8 LINE L1 3631 4366 -1812 2222 133 0 0 chr10 49813394 49813696 -90503069 - AluSq SINE Alu -11 302 1 6403 195 57 49 chr10 49813696 49814648 -90502117 + L1MB8 LINE L1 4366 5363 -815 1825 169 3 3 chr10 49814648 49814938 -90501827 + AluJo SINE Alu 1 290 -22 6403 195 57 49 chr10 49814938 49815746 -90501019 + L1MB8 LINE L1 5363 6163 -15 21 36 0 0 chr10 49816015 49816043 -90500722 + AT_rich Low_complexity Low_complexity 1 28 0 2087 118 4 0 chr10 49816087 49816406 -90500359 - AluSx SINE Alu 0 320 1 23 68 0 0 chr10 49816872 49816916 -90499849 + AT_rich Low_complexity Low_complexity 1 44 0 315 258 157 13 chr10 49816922 49817081 -90499684 - L1MC/D LINE L1 -1991 5817 5636 349 258 178 38 chr10 49822482 49822796 -90493969 - L2 LINE L2 -10 3303 2946 320 260 163 66 chr10 49823935 49824297 -90492468 - L1MC4a LINE L1 -104 6017 5618 923 208 0 40 chr10 49825459 49825661 -90491104 + MER58A DNA MER1_type 27 220 -4 364 218 23 23 chr10 49825766 49825853 -90490912 + MER3 DNA MER1_type 1 87 -122 2435 77 0 0 chr10 49826474 49826772 -90489993 - AluY SINE Alu -13 298 1 1647 184 20 20 chr10 49827103 49827408 -90489357 - AluJo SINE Alu -7 305 1 261 139 0 0 chr10 49827443 49827486 -90489279 + (T)n Simple_repeat Simple_repeat 1 43 0 2292 139 53 31 chr10 49828717 49828907 -90487858 + MSTB LTR MaLR 1 185 -241 2105 110 0 4 chr10 49828907 49829222 -90487543 + AluSc SINE Alu 1 314 0 2292 139 53 31 chr10 49829222 49829447 -90487318 + MSTB LTR MaLR 185 426 0 254 254 15 0 chr10 49829543 49829610 -90487155 - L2 LINE L2 -1 3271 3204 2519 90 0 0 chr10 49829653 49829964 -90486801 + AluY SINE Alu 1 311 0 323 319 6 49 chr10 49830206 49830369 -90486396 - L2 LINE L2 -469 2845 2690 4768 164 75 11 chr10 49830370 49831256 -90485509 + L1MC1 LINE L1 5392 6333 0 2197 106 0 0 chr10 49831625 49831932 -90484833 + AluSg SINE Alu 1 307 0 6067 189 71 27 chr10 49832395 49832913 -90483852 + L1MB8 LINE L1 3616 4110 -2068 2111 112 11 0 chr10 49832913 49833200 -90483565 + AluSx SINE Alu 5 294 -18 6067 189 71 27 chr10 49833200 49835125 -90481640 + L1MB8 LINE L1 4110 6168 -10 1986 159 0 3 chr10 49835125 49835426 -90481339 - AluSx SINE Alu -12 300 1 283 205 82 107 chr10 49835794 49835916 -90480849 + L2 LINE L2 3165 3283 -30 721 246 5 21 chr10 49835959 49836146 -90480619 + MER20 DNA MER1_type 36 219 0 1317 214 16 0 chr10 49836184 49836441 -90480324 + AluJo SINE Alu 1 261 -51 911 288 73 9 chr10 49836441 49836781 -90479984 + LTR16B LTR ERVL 103 464 0 232 340 31 0 chr10 49836823 49836920 -90479845 + MIR3 SINE MIR 88 187 -21 262 267 47 68 chr10 49837280 49837471 -90479294 - MIR SINE MIR -3 259 73 2540 232 47 14 chr10 49837516 49838149 -90478616 - L1ME1 LINE L1 -5 6161 5508 343 288 8 17 chr10 49838837 49838955 -90477810 - MIR3 SINE MIR -42 166 50 440 282 19 32 chr10 49838960 49839116 -90477649 + L2 LINE L2 3152 3305 -8 2304 84 0 39 chr10 49839117 49839428 -90477337 + AluY SINE Alu 1 299 -12 289 267 58 0 chr10 49839483 49839569 -90477196 - L2 LINE L2 -24 3248 3158 574 165 21 0 chr10 49839804 49839901 -90476864 + AluJo SINE Alu 38 136 -176 1467 141 0 0 chr10 49839943 49840149 -90476616 + AluJb SINE Alu 81 286 -26 426 229 0 29 chr10 49840379 49840484 -90476281 + L1MC5 LINE L1 7697 7798 -163 2239 95 3 0 chr10 49840550 49840844 -90475921 + AluY SINE Alu 1 295 -16 207 377 6 29 chr10 49844542 49844717 -90472048 + G-rich Low_complexity Low_complexity 4 174 0 1643 149 0 22 chr10 49844856 49845186 -90471579 + AluSx SINE Alu 24 347 0 620 301 171 11 chr10 49845202 49845671 -90471094 - L1MC/D LINE L1 -1991 5817 5274 2207 109 0 0 chr10 49845702 49846009 -90470756 - AluSx SINE Alu 0 307 1 9350 36 11 1 chr10 49846517 49848399 -90468366 + L1PA4 LINE L1 4255 6154 -1 635 310 25 8 chr10 49849523 49849762 -90467003 - MIR SINE MIR -5 257 15 3241 152 30 14 chr10 49849851 49850518 -90466247 + MER50 LTR ERV1 1 711 -23 912 364 6 3 chr10 49850523 49850869 -90465896 + LTR16B LTR ERVL 105 451 -13 981 302 66 42 chr10 49851323 49851898 -90464867 + MERVL LTR ERVL 468 1062 -3934 2133 204 48 40 chr10 49851898 49852397 -90464368 - MLT1D LTR MaLR -2 503 1 981 302 66 42 chr10 49852397 49852478 -90464287 + MERVL LTR ERVL 1062 1140 -3856 609 272 17 28 chr10 49852475 49852655 -90464110 + MERVL LTR ERVL 1915 2092 -2904 * 317 304 41 18 chr10 49852802 49852973 -90463792 + MERVL LTR ERVL 3141 3315 -2449 431 315 84 15 chr10 49854708 49854911 -90461854 + MIR SINE MIR 13 229 -33 569 259 25 0 chr10 49854950 49855108 -90461657 + MER103 DNA DNA 5 166 0 861 170 6 48 chr10 49855352 49855517 -90461248 + FRAM SINE Alu 1 157 -19 307 301 36 24 chr10 49856093 49856259 -90460506 - MER117 DNA MER1_type -29 168 1 220 361 12 0 chr10 49856302 49856385 -90460380 - MIR SINE MIR -90 118 35 315 258 157 13 chr10 49856705 49856864 -90459901 - L1MC/D LINE L1 -1991 5817 5636 374 265 174 37 chr10 49862256 49862577 -90454188 - L2 LINE L2 -3 3310 2946 304 286 169 36 chr10 49863830 49864078 -90452687 - L1MC4a LINE L1 -1910 5898 5618 870 210 10 40 chr10 49865240 49865440 -90451325 + MER58A DNA MER1_type 27 220 -4 340 241 23 23 chr10 49865545 49865632 -90451133 + MER3 DNA MER1_type 1 87 -122 2471 71 0 0 chr10 49866253 49866550 -90450215 - AluY SINE Alu -14 297 1 1636 183 20 20 chr10 49866881 49867181 -90449584 - AluJo SINE Alu -12 300 1 216 228 35 0 chr10 49867181 49867238 -90449527 + CT-rich Low_complexity Low_complexity 4 62 0 2328 139 53 31 chr10 49868471 49868662 -90448103 + MSTB LTR MaLR 1 186 -240 2082 106 0 7 chr10 49868662 49868944 -90447821 + AluSc SINE Alu 1 305 0 186 0 40 0 chr10 49868944 49868969 -90447796 + (CAAA)n Simple_repeat Simple_repeat 2 176 0 2328 139 53 31 chr10 49868969 49869193 -90447572 + MSTB LTR MaLR 186 426 0 282 254 15 0 chr10 49869289 49869356 -90447409 - L2 LINE L2 -1 3312 3245 2341 87 7 0 chr10 49869399 49869708 -90447057 + AluY SINE Alu 1 311 0 285 327 7 53 chr10 49869950 49870100 -90446665 - L2 LINE L2 -469 2845 2703 4732 159 57 23 chr10 49870100 49871002 -90445763 + L1MC1 LINE L1 5384 7764 -21 2128 117 0 0 chr10 49871371 49871670 -90445095 + AluSg SINE Alu 1 299 -11 196 357 127 0 chr10 49871715 49871872 -90444893 - L2 LINE L2 -823 2491 2315 6218 189 66 23 chr10 49872132 49872651 -90444114 + L1MB8 LINE L1 3616 4111 -2067 2056 95 11 0 chr10 49872651 49872935 -90443830 + AluSx SINE Alu 5 291 -21 6218 189 66 23 chr10 49872935 49874863 -90441902 + L1MB8 LINE L1 4111 6168 -10 1933 149 0 7 chr10 49874863 49875165 -90441600 - AluSx SINE Alu -12 300 1 352 284 150 55 chr10 49875328 49875655 -90441110 + L2 LINE L2 2926 3283 -30 749 246 5 21 chr10 49875698 49875885 -90440880 + MER20 DNA MER1_type 36 219 0 1258 210 16 0 chr10 49875923 49876180 -90440585 + AluJo SINE Alu 1 261 -51 963 291 71 6 chr10 49876180 49876520 -90440245 + LTR16B LTR ERVL 103 464 0 298 289 129 0 chr10 49876529 49876660 -90440105 + MIR3 SINE MIR 38 187 -21 306 255 40 105 chr10 49877020 49877220 -90439545 - MIR SINE MIR -3 259 73 2499 236 46 14 chr10 49877265 49877901 -90438864 - L1ME1 LINE L1 -5 6161 5506 388 288 8 17 chr10 49878586 49878704 -90438061 - MIR3 SINE MIR -42 166 50 508 284 31 25 chr10 49878704 49878866 -90437899 + L2 LINE L2 3144 3306 -7 2006 145 0 0 chr10 49878866 49879217 -90437548 + AluSx SINE Alu 1 351 0 654 302 168 4 chr10 49879227 49879686 -90437079 - L1MC/D LINE L1 -720 5857 5574 335 270 142 35 chr10 49879686 49879735 -90437030 - L1MC/D LINE L1 -3987 2439 2397 2147 125 0 0 chr10 49879735 49880040 -90436725 - AluSx SINE Alu -7 305 1 335 270 142 35 chr10 49880040 49880216 -90436549 - L1MC/D LINE L1 -4029 2397 2190 312 280 43 109 chr10 49880440 49880558 -90436207 - HAL1 LINE L1 -761 1746 1622 1911 134 3 10 chr10 49880558 49880856 -90435909 + AluJb SINE Alu 1 296 -16 312 280 43 109 chr10 49880856 49881087 -90435678 - HAL1 LINE L1 -885 1622 1420 * 342 304 74 27 chr10 49881083 49881419 -90435346 - L1MC/D LINE L1 -4902 1514 1163 2286 98 0 0 chr10 49882674 49882980 -90433785 - AluSc SINE Alu -3 306 1 2032 119 0 28 chr10 49883201 49883521 -90433244 + AluY SINE Alu 1 311 0 854 190 0 22 chr10 49883535 49883714 -90433051 + FRAM SINE Alu 1 175 -1 769 243 24 36 chr10 49883757 49884008 -90432757 - L1ME3A LINE L1 -9 6161 5914 476 228 40 40 chr10 49884013 49884162 -90432603 - LTR16C LTR ERVL -1 490 342 1804 159 0 7 chr10 49884162 49884464 -90432301 + AluSq SINE Alu 1 300 -13 846 130 15 15 chr10 49884471 49884602 -90432163 - FLAM_C SINE Alu 0 133 3 2028 123 3 0 chr10 49884618 49884918 -90431847 - AluSp SINE Alu -12 301 1 235 260 85 50 chr10 49885722 49885898 -90430867 - L1ME3A LINE L1 -564 5598 5532 30 45 0 0 chr10 49886167 49886211 -90430554 + AT_rich Low_complexity Low_complexity 1 44 0 2217 116 0 0 chr10 49886353 49886664 -90430101 + AluY SINE Alu 1 311 0 1144 123 14 55 chr10 49887171 49887223 -90429542 + L1MA4A LINE L1 6090 6143 -160 1982 120 0 46 chr10 49887223 49887548 -90429217 + AluSx SINE Alu 1 310 -2 1144 123 14 55 chr10 49887548 49887714 -90429051 + L1MA4A LINE L1 6143 6299 -4 279 280 59 17 chr10 49888135 49888253 -90428512 - L1P LINE L1 -729 5427 5305 363 240 56 102 chr10 49888273 49888469 -90428296 - L1ME3A LINE L1 -913 5233 5047 1485 148 136 33 chr10 49888471 49888769 -90427996 + MLT1A1 LTR MaLR 1 338 -27 2161 116 0 0 chr10 49888769 49889072 -90427693 - AluSx SINE Alu -9 303 1 1485 148 136 33 chr10 49889072 49889104 -90427661 + MLT1A1 LTR MaLR 338 365 0 291 266 5 109 chr10 49890368 49890405 -90426360 + L1MC5 LINE L1 7719 7758 -203 3251 88 34 21 chr10 49890405 49890883 -90425882 + L1PA13 LINE L1 5680 6163 0 291 266 5 109 chr10 49890883 49891037 -90425728 + L1MC5 LINE L1 7758 7890 -71 558 249 109 31 chr10 49891516 49891709 -90425056 - MIR SINE MIR -8 254 47 315 0 0 0 chr10 49891710 49891745 -90425020 + (TG)n Simple_repeat Simple_repeat 2 36 0 590 68 11 0 chr10 49891745 49891833 -90424932 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 377 338 49 39 chr10 49891981 49892185 -90424580 - L2 LINE L2 -228 3044 2839 1995 125 3 0 chr10 49892367 49892663 -90424102 - AluSp SINE Alu -16 297 1 1543 200 36 27 chr10 49892663 49892776 -90423989 - L1M4 LINE L1 -3605 2777 2667 2348 82 0 0 chr10 49892776 49893081 -90423684 - AluY SINE Alu -6 305 1 1543 200 36 27 chr10 49893081 49893531 -90423234 - L1M4 LINE L1 -3715 2667 2214 220 252 155 48 chr10 49893742 49893845 -90422920 + L2 LINE L2 3200 3313 0 932 211 48 5 chr10 49893884 49894092 -90422673 - MLT1H1 LTR MaLR -8 547 331 2077 108 7 0 chr10 49894997 49895294 -90421471 + AluSq SINE Alu 1 299 -14 401 305 98 5 chr10 49895298 49895501 -90421264 - Charlie2a DNA MER1_type -1907 955 734 2023 87 56 0 chr10 49896276 49896562 -90420203 + AluY SINE Alu 2 303 -8 2032 108 0 0 chr10 49896768 49897046 -90419719 + AluSg SINE Alu 1 278 -32 186 43 0 0 chr10 49897046 49897069 -90419696 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 722 203 47 7 chr10 49897438 49897586 -90419179 + AluJb SINE Alu 140 293 -19 283 309 170 21 chr10 49897622 49897910 -90418855 + MER102b DNA MER1_type 11 341 0 1999 87 0 0 chr10 49898340 49898606 -90418159 + pTR5 LTR ERV1 127 392 -2046 2218 68 0 0 chr10 49898621 49898933 -90417832 + AluY SINE Alu 1 312 0 573 218 106 0 chr10 49898933 49899121 -90417644 + L1M4 LINE L1 2478 2685 -3461 305 266 234 8 chr10 49899144 49899268 -90417497 - L2 LINE L2 0 3272 3121 540 251 37 49 chr10 49899489 49899652 -90417113 + L2 LINE L2 3153 3313 0 415 316 23 41 chr10 49899806 49900024 -90416741 + MLT1K LTR MaLR 3 216 -372 361 294 20 20 chr10 49900071 49900224 -90416541 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 1036 193 60 5 chr10 49900232 49900513 -90416252 + L1M4 LINE L1 2703 3097 -3049 2074 113 0 25 chr10 49900513 49900798 -90415967 + AluY SINE Alu 1 279 -32 354 45 0 0 chr10 49900798 49900842 -90415923 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 2074 113 0 25 chr10 49900842 49900875 -90415890 + AluY SINE Alu 279 311 0 1036 193 60 5 chr10 49900875 49900941 -90415824 + L1M4 LINE L1 3097 3158 -2988 1651 134 58 4 chr10 49900947 49901222 -90415543 + AluSg1 SINE Alu 16 305 -4 328 122 0 0 chr10 49901284 49901333 -90415432 - MER58 DNA MER1_type 0 2420 2372 755 248 36 47 chr10 49901489 49901767 -90414998 + L1M4 LINE L1 3339 3613 -2533 185 254 45 45 chr10 49902241 49902308 -90414457 + MIR SINE MIR 89 155 -107 359 97 44 257 chr10 49902430 49902636 -90414129 - L1MB4 LINE L1 0 6180 6019 547 224 119 35 chr10 49902723 49902924 -90413841 - MER20 DNA MER1_type -1 218 1 967 155 0 0 chr10 49903019 49903174 -90413591 + FRAM SINE Alu 9 163 -13 181 279 59 0 chr10 49903914 49903982 -90412783 + MIR SINE MIR 77 148 -114 288 53 0 0 chr10 49905339 49905377 -90411388 + (T)n Simple_repeat Simple_repeat 1 38 0 2461 74 0 0 chr10 49906079 49906389 -90410376 + AluY SINE Alu 1 310 -1 286 206 196 0 chr10 49906834 49906931 -90409834 - L2 LINE L2 -218 3054 2939 552 259 122 15 chr10 49907279 49907484 -90409281 - MIR SINE MIR -34 228 2 348 309 128 33 chr10 49907915 49908158 -90408607 - L1ME3A LINE L1 -209 5961 5696 686 204 34 40 chr10 49908524 49908700 -90408065 + MER5B DNA MER1_type 1 175 -3 342 203 0 0 chr10 49909385 49909444 -90407321 + MER70B LTR ERVL 101 159 -419 * 1912 239 3 18 chr10 49909443 49909693 -90407072 + MER70A LTR ERVL 90 333 -139 2215 68 0 0 chr10 49909693 49909971 -90406794 - AluY SINE Alu -31 280 3 1912 239 3 18 chr10 49909971 49910109 -90406656 + MER70A LTR ERVL 333 472 0 556 303 118 5 chr10 49910128 49910349 -90406416 - MIR SINE MIR -16 246 1 1702 145 189 19 chr10 49911088 49911454 -90405311 + MSTA LTR MaLR 1 428 0 3285 137 56 13 chr10 49911493 49912100 -90404665 + L1PBa LINE L1 2007 2639 -4224 1028 161 16 16 chr10 49912108 49912359 -90404406 + L1PBa LINE L1 2800 3051 -3811 1134 83 0 6 chr10 49912359 49912515 -90404250 - AluSc SINE Alu -4 305 151 570 133 56 0 chr10 49912516 49912606 -90404159 - AluSg SINE Alu -211 99 5 780 167 10 64 chr10 49912611 49912815 -90403950 + L1 LINE L1 3043 3235 -3627 400 182 0 0 chr10 49912924 49913001 -90403764 + L1 LINE L1 3993 4069 -2793 1567 143 28 39 chr10 49913002 49913288 -90403477 - LTR8 LTR ERV1 0 691 409 1120 275 54 37 chr10 49913308 49913923 -90402842 + L1MC5 LINE L1 7289 7913 -48 2294 63 0 3 chr10 49914371 49914671 -90402094 - AluY SINE Alu -12 299 1 2562 173 28 9 chr10 49915229 49915687 -90401078 - MLT1C LTR MaLR 0 467 1 785 279 124 62 chr10 49915890 49916096 -90400669 - MLT1J LTR MaLR -50 461 269 2741 106 18 32 chr10 49916096 49916136 -90400629 - MSTA LTR MaLR 0 428 389 1881 155 0 10 chr10 49916136 49916439 -90400326 + AluSq SINE Alu 1 300 -13 2741 106 18 32 chr10 49916439 49916832 -90399933 - MSTA LTR MaLR -39 389 1 785 279 124 62 chr10 49916832 49917059 -90399706 - MLT1J LTR MaLR -242 269 1 2407 111 19 30 chr10 49917212 49917580 -90399185 + THE1B LTR MaLR 1 364 0 473 278 83 65 chr10 49918350 49918580 -90398185 - MIR SINE MIR -17 245 12 18394 46 3 1 chr10 49918701 49921854 -90394911 - L1PA5 LINE L1 0 6154 3000 1277 37 0 0 chr10 49921852 49922013 -90394752 + L1PA5 LINE L1 2838 2998 -3148 * 185 0 40 0 chr10 49922754 49922779 -90393986 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 180 182 0 0 chr10 49923171 49923215 -90393550 + (CA)n Simple_repeat Simple_repeat 2 45 0 444 409 7 33 chr10 49923220 49923523 -90393242 + L2 LINE L2 2978 3272 0 350 241 106 21 chr10 49923801 49923942 -90392823 + MLT1I LTR MaLR 194 346 -63 279 318 68 23 chr10 49923995 49924127 -90392638 + MLT1J LTR MaLR 41 178 -333 237 301 37 59 chr10 49924282 49924418 -90392347 + MLT1L LTR MaLR 476 608 -7 488 328 109 18 chr10 49926547 49926876 -90389889 - MARNA DNA Mariner -157 429 71 262 296 12 0 chr10 49926977 49927058 -90389707 + MIR3 SINE MIR 122 203 -5 244 64 43 0 chr10 49927235 49927282 -90389483 + (TC)n Simple_repeat Simple_repeat 1 49 0 511 165 23 30 chr10 49927396 49927529 -90389236 - AluSq/x SINE Alu -178 134 3 1219 238 90 43 chr10 49927530 49927997 -90388768 + MLT1H LTR MaLR 45 533 -16 180 222 22 0 chr10 49928492 49928537 -90388228 - L2 LINE L2 0 3313 3268 881 150 0 0 chr10 49928690 49928817 -90387948 + AluSg/x SINE Alu 167 293 -19 255 269 0 15 chr10 49928955 49929022 -90387743 + L2 LINE L2 3206 3271 -1 503 267 45 27 chr10 49930123 49930350 -90386415 - L1MCa LINE L1 -4778 1829 1608 2408 155 38 5 chr10 49930350 49930796 -90385969 - LOR1b LTR ERV1 0 461 1 503 267 45 27 chr10 49930796 49930893 -90385872 - L1MCa LINE L1 -4999 1608 1298 501 254 107 24 chr10 49930986 49931191 -90385574 + MLT1A1 LTR MaLR 144 365 0 429 304 61 6 chr10 49931237 49931418 -90385347 + L2 LINE L2 3122 3312 -1 1747 167 20 14 chr10 49932434 49932728 -90384037 - AluSx SINE Alu -16 296 1 1800 164 23 3 chr10 49932999 49933303 -90383462 + AluJo SINE Alu 1 310 -2 26 0 0 0 chr10 49933467 49933493 -90383272 + GC_rich Low_complexity Low_complexity 1 26 0 675 271 106 44 chr10 49933668 49934119 -90382646 + MLT1L LTR MaLR 137 615 0 1101 194 93 32 chr10 49934922 49935201 -90381564 - L1MD2 LINE L1 -54 6305 6010 905 196 5 10 chr10 49935207 49935401 -90381364 - L1MD2 LINE L1 -398 5961 5769 1745 231 31 1 chr10 49935414 49936052 -90380713 - L1MD2 LINE L1 -722 5637 4986 226 289 35 35 chr10 49936094 49936208 -90380557 - MLT1H1 LTR MaLR -397 158 45 252 285 75 51 chr10 49936451 49936665 -90380100 - LTR33 LTR ERVL -162 359 141 233 222 32 0 chr10 49936665 49936728 -90380037 + MLT1B LTR MaLR 8 72 -318 194 304 0 38 chr10 49936864 49936943 -90379822 + MIR SINE MIR 118 193 -69 500 260 34 64 chr10 49937686 49937890 -90378875 - MIR SINE MIR -57 205 8 312 248 128 8 chr10 49938299 49938533 -90378232 + L2 LINE L2 2615 2876 -438 346 200 137 40 chr10 49939499 49939674 -90377091 - L2 LINE L2 -249 3064 2873 3483 239 51 40 chr10 49941279 49941993 -90374772 + L1M4 LINE L1 3009 3745 -2401 2436 66 0 41 chr10 49941993 49942310 -90374455 - AluSg SINE Alu -6 304 1 3483 239 51 40 chr10 49942310 49942855 -90373910 + L1M4 LINE L1 3745 4282 -1864 1179 177 57 52 chr10 49944890 49944948 -90371817 + AluJb SINE Alu 63 119 -193 198 0 0 0 chr10 49944948 49944970 -90371795 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1179 177 57 52 chr10 49944970 49945137 -90371628 + AluJb SINE Alu 119 292 -20 1780 108 129 39 chr10 49945137 49945423 -90371342 + AluSx SINE Alu 1 312 0 1179 177 57 52 chr10 49945423 49945444 -90371321 + AluJb SINE Alu 292 311 -1 579 323 25 39 chr10 49945473 49945752 -90371013 - MER4B-int LTR ERV1 -6135 623 349 2183 200 111 6 chr10 49946132 49946637 -90370128 - LTR64 LTR ERVK 0 558 1 255 369 33 0 chr10 49946893 49947015 -90369750 - MIR SINE MIR -65 143 18 395 342 30 39 chr10 49947188 49947422 -90369343 + L2 LINE L2 2906 3137 -135 500 166 110 0 chr10 49947425 49947588 -90369177 - AluSp SINE Alu -16 297 117 185 237 119 42 chr10 49947691 49947809 -90368956 + L2 LINE L2 2933 3059 -254 * 705 232 30 26 chr10 49947789 49947972 -90368793 + MIR SINE MIR 51 235 -27 4835 99 27 12 chr10 49947984 49948731 -90368034 - HSMAR2 DNA Mariner -1 1301 544 904 157 118 17 chr10 49949286 49949913 -90366852 + L1MC2 LINE L1 5544 6333 -11 1271 164 0 20 chr10 49949963 49950164 -90366601 + AluJo SINE Alu 1 197 -115 717 108 0 47 chr10 49950371 49950500 -90366265 - FLAM_C SINE Alu 0 143 21 839 230 54 94 chr10 49950839 49950937 -90365828 + MLT1C LTR MaLR 2 102 -365 2698 48 0 10 chr10 49950937 49951251 -90365514 + AluY SINE Alu 1 311 0 839 230 54 94 chr10 49951251 49951600 -90365165 + MLT1C LTR MaLR 102 431 -36 2397 93 0 0 chr10 49952325 49952625 -90364140 + AluY SINE Alu 1 300 -11 2088 86 19 0 chr10 49952625 49952880 -90363885 + AluY SINE Alu 36 296 -15 216 213 49 33 chr10 49954087 49954148 -90362617 - MIR3 SINE MIR -45 163 102 970 153 12 0 chr10 49954360 49954530 -90362235 - FAM SINE Alu 0 175 4 492 327 38 15 chr10 49954727 49954990 -90361775 - L1ME3A LINE L1 -222 5948 5680 418 203 0 0 chr10 49955299 49955378 -90361387 - MIR SINE MIR -105 157 79 241 125 0 0 chr10 49955378 49955418 -90361347 - MIR SINE MIR -144 118 79 274 125 0 0 chr10 49955418 49955458 -90361307 - MIR SINE MIR -144 118 79 439 175 52 0 chr10 49955458 49955555 -90361210 - MIR SINE MIR -144 118 17 2542 75 0 3 chr10 49955719 49956027 -90360738 - AluY SINE Alu -4 307 1 439 194 93 37 chr10 49956159 49956267 -90360498 + MIR SINE MIR 36 149 -59 235 232 49 12 chr10 49956445 49956527 -90360238 + MIR SINE MIR 63 147 -61 533 203 6 0 chr10 49957466 49957643 -90359122 + GA-rich Low_complexity Low_complexity 1 178 0 25 0 0 0 chr10 49958425 49958450 -90358315 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 49958545 49958568 -90358197 + GC_rich Low_complexity Low_complexity 1 23 0 197 274 41 0 chr10 49959001 49959074 -90357691 - MIR SINE MIR -110 152 77 2058 90 19 4 chr10 49959203 49959470 -90357295 + AluSg SINE Alu 21 291 -19 380 174 22 0 chr10 49959552 49959644 -90357121 - L1MB3 LINE L1 -1 6182 6089 530 206 9 9 chr10 49959647 49959782 -90356983 - AluJb SINE Alu 0 310 176 1051 222 156 3 chr10 49960031 49960333 -90356432 - MLT1F1 LTR MaLR -117 450 103 * 1289 224 30 62 chr10 49960332 49960702 -90356063 + MLT1A1 LTR MaLR 8 365 0 358 307 30 0 chr10 49960702 49960803 -90355962 - MLT1F1 LTR MaLR -458 109 6 1054 225 61 13 chr10 49962444 49962755 -90354010 + LTR16A LTR ERVL 110 435 -15 201 74 0 0 chr10 49962773 49962800 -90353965 + (TTCCC)n Simple_repeat Simple_repeat 1 27 0 743 263 113 27 chr10 49963152 49963487 -90353278 - HAL1 LINE L1 -586 1921 1558 908 89 8 0 chr10 49963618 49963741 -90353024 + FLAM_C SINE Alu 1 124 -19 246 280 92 19 chr10 49964015 49964222 -90352543 - L1M4 LINE L1 -2980 3166 2945 309 206 98 0 chr10 49966327 49966419 -90350346 + MER5A DNA MER1_type 9 109 -80 256 242 61 0 chr10 49966628 49966694 -90350071 - L2 LINE L2 -2 3311 3242 23 0 0 0 chr10 49966903 49966926 -90349839 + GC_rich Low_complexity Low_complexity 1 23 0 595 269 124 59 chr10 49967616 49968003 -90348762 - MLT1K LTR MaLR -31 557 146 1703 173 48 30 chr10 49968501 49968872 -90347893 + L1MB7 LINE L1 5632 6009 -175 494 215 40 40 chr10 49968879 49969028 -90347737 - MIR SINE MIR -83 179 31 1030 318 28 30 chr10 49970434 49970868 -90345897 + MLT1J LTR MaLR 1 433 -78 22 0 0 0 chr10 49971984 49972006 -90344759 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 49972097 49972121 -90344644 + AT_rich Low_complexity Low_complexity 1 24 0 244 177 81 16 chr10 49972489 49972551 -90344214 + L2 LINE L2 3205 3270 -2 264 286 150 37 chr10 49973096 49973369 -90343396 + L2 LINE L2 2456 2759 -555 34 0 0 0 chr10 49974436 49974470 -90342295 + GC_rich Low_complexity Low_complexity 1 34 0 269 227 9 36 chr10 49975010 49975120 -90341645 + (TG)n Simple_repeat Simple_repeat 1 107 0 2337 214 41 76 chr10 49976455 49977270 -90339495 - L1M3 LINE L1 -735 5448 4629 773 266 80 12 chr10 49978013 49978351 -90338414 + L1MB7 LINE L1 5760 6120 -64 223 244 11 11 chr10 49978878 49978968 -90337797 + (CA)n Simple_repeat Simple_repeat 1 90 0 406 281 30 49 chr10 49979358 49979522 -90337243 - MIR SINE MIR -79 183 23 243 336 67 17 chr10 49979558 49979677 -90337088 - L2 LINE L2 -25 3247 3123 649 233 37 0 chr10 49979832 49979995 -90336770 - LTR42 LTR ERVL 0 495 327 1651 143 59 29 chr10 49981306 49981578 -90335187 + AluJo SINE Alu 1 280 -32 409 233 11 0 chr10 49982575 49982665 -90334100 - L2 LINE L2 -2 3311 3221 321 135 0 0 chr10 49982872 49982924 -90333841 + (TA)n Simple_repeat Simple_repeat 1 52 0 481 338 96 33 chr10 49982933 49983376 -90333389 - L2 LINE L2 -36 3236 2757 495 199 17 122 chr10 49985724 49985905 -90330860 + MIR SINE MIR 97 258 -4 1955 153 0 9 chr10 49987034 49987360 -90329405 - MER7A DNA MER2_type -24 322 2 1261 273 85 31 chr10 49988117 49988703 -90328062 + L1MEc LINE L1 54 671 -5725 1877 248 66 50 chr10 49988758 49989602 -90327163 + L1M4 LINE L1 3270 4127 -2019 * 5250 155 26 17 chr10 49989601 49991183 -90325582 + L1MA8 LINE L1 4687 6287 -4 21 0 0 0 chr10 49991183 49991204 -90325561 + AT_rich Low_complexity Low_complexity 1 21 0 433 208 25 161 chr10 49991208 49991444 -90325321 + L1M4 LINE L1 4114 4317 -1829 25 0 0 0 chr10 49992267 49992292 -90324473 + AT_rich Low_complexity Low_complexity 1 25 0 36 23 0 0 chr10 49992352 49992395 -90324370 + AT_rich Low_complexity Low_complexity 1 43 0 290 65 22 0 chr10 49992504 49992550 -90324215 + MADE1 DNA Mariner 1 47 -33 414 264 21 50 chr10 49992583 49992723 -90324042 - MIR SINE MIR -73 189 54 22 35 0 0 chr10 49992913 49992942 -90323823 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr10 49992981 49993025 -90323740 + AT_rich Low_complexity Low_complexity 1 44 0 495 213 19 25 chr10 49993443 49993603 -90323162 - MER104 DNA Tc2 -8 172 14 315 179 0 0 chr10 49993965 49994032 -90322733 + (CA)n Simple_repeat Simple_repeat 2 68 0 511 320 75 86 chr10 49994600 49994916 -90321849 + L2 LINE L2 2304 2622 -650 1135 134 0 0 chr10 49994916 49995087 -90321678 - L1PA15 LINE L1 -7 6158 5988 511 320 75 86 chr10 49995087 49995759 -90321006 + L2 LINE L2 2622 3271 -1 3757 155 89 48 chr10 49995795 49996588 -90320177 + LTR1B LTR ERV1 1 826 0 1823 185 43 5 chr10 49996611 49997055 -90319710 - Charlie4a DNA MER1_type -1 507 47 244 295 71 0 chr10 49997341 49997453 -90319312 + MIR SINE MIR 103 222 -40 24 67 0 0 chr10 49998407 49998452 -90318313 + AT_rich Low_complexity Low_complexity 1 45 0 1347 272 104 17 chr10 49999022 49999485 -90317280 - L2 LINE L2 -418 2896 2394 441 0 0 0 chr10 50001530 50001579 -90315186 + (CA)n Simple_repeat Simple_repeat 2 50 0 8583 223 52 17 chr10 50001665 50004362 -90312403 + L1MB7 LINE L1 2417 5020 -1164 1975 108 4 0 chr10 50004362 50004620 -90312145 - AluSc SINE Alu -22 287 29 8583 223 52 17 chr10 50004620 50005220 -90311545 + L1MB7 LINE L1 5020 5846 -338 2170 119 3 0 chr10 50005220 50005513 -90311252 + AluSq SINE Alu 1 294 -19 8583 223 52 17 chr10 50005513 50005673 -90311092 + L1MB7 LINE L1 5846 5999 -185 276 30 0 0 chr10 50007184 50007217 -90309548 + (CA)n Simple_repeat Simple_repeat 2 34 0 384 311 77 49 chr10 50008209 50008392 -90308373 - MIR3 SINE MIR -5 203 16 324 265 94 77 chr10 50009140 50009310 -90307455 + HAL1 LINE L1 2300 2472 -35 2253 78 0 3 chr10 50010005 50010327 -90306438 - L1P LINE L1 -931 5215 4895 2754 82 0 2 chr10 50010327 50010727 -90306038 - L1P LINE L1 -1021 5125 4727 4869 48 8 0 chr10 50010727 50011318 -90305447 + L1PA7 LINE L1 5551 6153 -1 967 180 89 145 chr10 50011920 50012198 -90304567 + MSTB2 LTR MaLR 1 242 -215 2336 104 0 3 chr10 50012198 50012505 -90304260 - AluSg SINE Alu -4 306 1 967 180 89 145 chr10 50012505 50012710 -90304055 + MSTB2 LTR MaLR 242 457 0 2088 151 3 0 chr10 50012821 50013126 -90303639 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 50013702 50013723 -90303042 + AT_rich Low_complexity Low_complexity 1 21 0 185 254 0 55 chr10 50013950 50014005 -90302760 - L2 LINE L2 0 3272 3221 188 208 19 0 chr10 50014143 50014196 -90302569 - L2 LINE L2 -304 2968 2915 191 290 58 0 chr10 50014276 50014345 -90302420 - MIR SINE MIR -56 206 134 606 283 9 22 chr10 50014744 50014967 -90301798 - MER102a DNA MER1_type 0 330 111 359 223 59 131 chr10 50014985 50015288 -90301477 + L1MC5 LINE L1 7453 7711 -250 3220 94 30 4 chr10 50015288 50015755 -90301010 + L1PA13 LINE L1 5676 6154 -9 359 223 59 131 chr10 50015755 50015923 -90300842 + L1MC5 LINE L1 7711 7890 -71 548 249 109 31 chr10 50016402 50016595 -90300170 - MIR SINE MIR -8 254 47 315 0 0 0 chr10 50016596 50016631 -90300134 + (TG)n Simple_repeat Simple_repeat 2 36 0 590 68 11 0 chr10 50016631 50016719 -90300046 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 369 338 49 39 chr10 50016867 50017071 -90299694 - L2 LINE L2 -228 3044 2839 1851 172 0 3 chr10 50017253 50017550 -90299215 - AluJo SINE Alu -16 296 1 438 294 96 6 chr10 50018294 50018471 -90298294 + MER91A DNA MER1_type 3 195 -1 1592 196 61 42 chr10 50018586 50019044 -90297721 + MLT1C LTR MaLR 1 467 0 487 289 84 12 chr10 50019075 50019241 -90297524 + MIR SINE MIR 75 252 -10 186 118 0 0 chr10 50019339 50019373 -90297392 + (TA)n Simple_repeat Simple_repeat 2 35 0 235 212 76 0 chr10 50019538 50019604 -90297161 + MLT1J2 LTR MaLR 71 141 -309 275 238 16 0 chr10 50019612 50019675 -90297090 + MLT1J2 LTR MaLR 343 406 -44 1728 106 69 22 chr10 50020140 50020414 -90296351 + AluSg SINE Alu 18 304 -6 631 290 60 23 chr10 50020655 50020779 -90295986 + L1ME4a LINE L1 5576 5694 -427 2370 91 0 7 chr10 50020779 50021075 -90295690 + AluSx SINE Alu 1 294 -18 631 290 60 23 chr10 50021075 50021385 -90295380 + L1ME4a LINE L1 5694 6026 -95 1340 140 33 0 chr10 50021477 50021691 -90295074 + L1MC1 LINE L1 6107 6327 -6 540 233 50 56 chr10 50021741 50021921 -90294844 - MLT1G1 LTR MaLR -414 181 3 23 0 0 0 chr10 50021921 50021944 -90294821 + AT_rich Low_complexity Low_complexity 1 23 0 326 250 123 23 chr10 50022063 50022283 -90294482 + L1M4 LINE L1 2151 2392 -3754 399 293 55 0 chr10 50022440 50022604 -90294161 + L1ME4a LINE L1 5949 6121 0 731 186 0 0 chr10 50023014 50023132 -90293633 + FLAM_C SINE Alu 1 118 -15 21 57 0 0 chr10 50023132 50023167 -90293598 + AT_rich Low_complexity Low_complexity 1 35 0 350 205 8 25 chr10 50023718 50023840 -90292925 + GA-rich Low_complexity Low_complexity 2 121 0 278 306 132 91 chr10 50024530 50024979 -90291786 + L2 LINE L2 2732 3208 -64 235 295 124 0 chr10 50025260 50025365 -90291400 + MIR3 SINE MIR 85 202 -6 1997 146 7 3 chr10 50025734 50026035 -90290730 + AluJo SINE Alu 1 302 -10 328 269 27 186 chr10 50026332 50026633 -90290132 + L2 LINE L2 3004 3256 -16 756 302 47 13 chr10 50026849 50027084 -90289681 - MIR SINE MIR -17 245 3 303 298 29 10 chr10 50027302 50027406 -90289359 - MIR SINE MIR -124 138 33 219 294 255 39 chr10 50027848 50028052 -90288713 - MIR SINE MIR -1 261 14 349 338 7 35 chr10 50029002 50029147 -90287618 - MIR SINE MIR -94 168 28 572 288 41 8 chr10 50029943 50030186 -90286579 + MER112 DNA MER1_type 9 259 -1 2715 93 11 11 chr10 50031141 50031516 -90285249 - THE1C LTR MaLR 0 375 1 529 343 50 16 chr10 50031587 50031829 -90284936 - MIR SINE MIR 0 262 13 591 294 115 35 chr10 50031853 50032139 -90284626 - L2 LINE L2 -78 3235 2927 991 245 39 78 chr10 50032208 50032567 -90284198 + MLT1F LTR MaLR 198 542 0 948 88 29 0 chr10 50032784 50032921 -90283844 + L1MA2 LINE L1 6162 6302 -2 463 242 26 68 chr10 50033010 50033200 -90283565 + MER63A DNA MER1_type 29 210 0 908 281 9 4 chr10 50034513 50034741 -90282024 + MIR SINE MIR 2 230 -32 2171 126 7 0 chr10 50034802 50035103 -90281662 - AluSx SINE Alu -9 303 1 353 192 42 42 chr10 50035246 50035366 -90281399 + LTR33A LTR ERVL 402 521 -2 1599 207 173 12 chr10 50035808 50036224 -90280541 + MLT1F1 LTR MaLR 3 485 -82 386 281 118 0 chr10 50036330 50036465 -90280300 - MIR SINE MIR -108 154 4 734 220 52 0 chr10 50036961 50037152 -90279613 + MER3 DNA MER1_type 9 209 0 205 250 0 0 chr10 50038056 50038100 -90278665 + CT-rich Low_complexity Low_complexity 4 47 0 355 257 0 20 chr10 50038116 50038217 -90278548 - L1MC5 LINE L1 -52 7909 7811 202 194 145 16 chr10 50038323 50038385 -90278380 + MIR SINE MIR 179 248 -14 1995 133 57 46 chr10 50039359 50039728 -90277037 - MER83C LTR ERV1 0 373 1 304 236 0 14 chr10 50040185 50040257 -90276508 + MER102a DNA MER1_type 132 202 -128 329 247 21 0 chr10 50041488 50041585 -90275180 + (TA)n Simple_repeat Simple_repeat 2 100 0 633 270 78 25 chr10 50041617 50041821 -90274944 + MIR SINE MIR 19 233 -29 487 310 52 17 chr10 50041986 50042160 -90274605 - MIR3 SINE MIR -9 199 20 377 271 18 78 chr10 50042328 50042494 -90274271 + MIR SINE MIR 93 248 -14 2102 120 0 29 chr10 50042595 50042903 -90273862 - AluSx SINE Alu -13 299 1 316 254 123 48 chr10 50043251 50043503 -90273262 + MER102a DNA MER1_type 59 329 -1 392 283 24 68 chr10 50044178 50044383 -90272382 - MER117 DNA MER1_type 0 197 2 337 320 70 35 chr10 50044895 50045067 -90271698 + MIR SINE MIR 3 180 -82 529 321 21 10 chr10 50045516 50045709 -90271056 + MER102a DNA MER1_type 136 330 0 185 0 40 0 chr10 50047203 50047228 -90269537 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 249 195 147 92 chr10 50047428 50047679 -90269086 + L1ME4a LINE L1 5803 6067 -54 2372 93 0 13 chr10 50049484 50049796 -90266969 + AluY SINE Alu 1 308 -3 1552 223 35 60 chr10 50049823 50050374 -90266391 + L1MC5 LINE L1 6688 7224 -737 434 262 41 36 chr10 50050459 50050680 -90266085 + L1MC5 LINE L1 7273 7494 -467 230 288 18 27 chr10 50050681 50050792 -90265973 + GA-rich Low_complexity Low_complexity 6 115 0 496 207 84 60 chr10 50050792 50051043 -90265722 + L1MC5 LINE L1 7475 7731 -230 213 247 0 0 chr10 50051093 50051174 -90265591 + (TGGA)n Simple_repeat Simple_repeat 4 84 0 398 259 44 25 chr10 50051536 50051694 -90265071 + LTR67 LTR ERVL 384 544 -13 190 154 77 0 chr10 50054232 50054271 -90262494 - MIR SINE MIR -3 259 218 23 0 0 0 chr10 50054301 50054324 -90262441 + AT_rich Low_complexity Low_complexity 1 23 0 689 269 26 71 chr10 50054326 50054594 -90262171 - MIR SINE MIR -6 256 1 1502 146 57 7 chr10 50054637 50054917 -90261848 - AluSx SINE Alu -7 305 12 184 263 53 0 chr10 50055125 50055182 -90261583 - MIR3 SINE MIR -16 192 133 354 273 78 75 chr10 50055235 50055609 -90261156 + MLT1I LTR MaLR 34 408 -1 1551 208 0 21 chr10 50057237 50057526 -90259239 + AluJo SINE Alu 1 283 -29 233 29 0 29 chr10 50057532 50057567 -90259198 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 18544 65 2 0 chr10 50057945 50060425 -90256340 + L1PA4 LINE L1 14 2496 -3650 260 109 0 22 chr10 50060578 50060624 -90256141 + (GAAAA)n Simple_repeat Simple_repeat 5 49 0 23703 36 7 0 chr10 50062881 50066544 -90250221 + L1PA4 LINE L1 2484 6151 -4 525 258 66 28 chr10 50066625 50066807 -90249958 - Charlie8 DNA MER1_type -2158 259 71 310 359 63 34 chr10 50066901 50067138 -90249627 - L2 LINE L2 0 3272 3029 1725 226 77 26 chr10 50067171 50067666 -90249099 - MLT1H LTR MaLR -17 532 13 231 380 110 25 chr10 50068005 50068205 -90248560 - L2 LINE L2 -181 3091 2875 578 270 103 0 chr10 50069640 50069814 -90246951 + MIR SINE MIR 16 207 -55 952 174 72 31 chr10 50070286 50070305 -90246460 + AluJb SINE Alu 101 118 -194 224 29 0 29 chr10 50070305 50070339 -90246426 + (TAA)n Simple_repeat Simple_repeat 2 34 0 952 174 72 31 chr10 50070339 50070514 -90246251 + AluJb SINE Alu 118 303 -9 628 274 40 5 chr10 50070788 50070989 -90245776 + MER63A DNA MER1_type 3 210 0 207 337 178 0 chr10 50072502 50072603 -90244162 - MIR3 SINE MIR -54 154 36 295 194 58 101 chr10 50073053 50073192 -90243573 - Charlie2a DNA MER1_type -31 2831 2699 * 344 310 32 11 chr10 50073180 50073367 -90243398 - Charlie2a DNA MER1_type -1200 1662 1472 231 234 180 45 chr10 50073421 50073532 -90243233 - Charlie2b DNA MER1_type -2095 687 562 225 370 9 0 chr10 50073540 50073648 -90243117 - Charlie2b DNA MER1_type -2554 308 200 261 0 0 0 chr10 50073667 50073696 -90243069 + (A)n Simple_repeat Simple_repeat 1 29 0 311 265 20 10 chr10 50073697 50073795 -90242970 - Charlie2b DNA MER1_type -2731 131 33 198 0 0 0 chr10 50073916 50073938 -90242827 + (T)n Simple_repeat Simple_repeat 1 22 0 298 286 141 19 chr10 50076438 50076618 -90240147 + MLT1J2 LTR MaLR 1 200 -250 276 180 230 0 chr10 50076730 50076830 -90239935 + Charlie2 DNA MER1_type 2739 2861 -1 2181 156 54 15 chr10 50076860 50077270 -90239495 - MSTB LTR MaLR 0 426 1 509 198 74 8 chr10 50077377 50077498 -90239267 - FRAM SINE Alu -10 166 38 1792 268 50 8 chr10 50077623 50078145 -90238620 + MLT1H1 LTR MaLR 12 555 0 183 231 51 0 chr10 50078316 50078355 -90238410 + L2 LINE L2 3263 3303 -10 1101 302 108 37 chr10 50078511 50079406 -90237359 - L2 LINE L2 0 3313 2360 337 226 9 9 chr10 50079641 50079747 -90237018 - MER113 DNA MER1_type? -415 106 1 353 252 54 45 chr10 50080352 50080463 -90236302 - MIR SINE MIR -87 175 64 266 284 10 20 chr10 50080747 50080849 -90235916 - L1M4 LINE L1 -2536 3610 3510 382 250 152 0 chr10 50080907 50081019 -90235746 + L1ME3A LINE L1 6033 6161 -9 514 198 33 0 chr10 50081073 50081194 -90235571 - MLT1L LTR MaLR -48 567 443 874 208 101 132 chr10 50081307 50081679 -90235086 + L1ME2 LINE L1 5567 5914 -250 195 100 0 0 chr10 50081679 50081709 -90235056 + (CA)n Simple_repeat Simple_repeat 1 30 0 874 208 101 132 chr10 50081709 50081943 -90234822 + L1ME2 LINE L1 5914 6154 -10 203 356 30 10 chr10 50084142 50084243 -90232522 - MIR3 SINE MIR -103 105 3 2150 156 19 3 chr10 50084703 50085063 -90231702 - MER47A DNA MER2_type 0 366 1 211 219 292 21 chr10 50086853 50086949 -90229816 + L2 LINE L2 3191 3312 -1 339 174 29 0 chr10 50088685 50088754 -90228011 - MER103 DNA DNA -44 122 52 675 249 53 29 chr10 50089043 50089288 -90227477 + L1MCb LINE L1 3 253 -5792 11984 175 47 11 chr10 50089496 50091880 -90224885 + L1MA4A LINE L1 7 2476 -4373 3301 22 0 49 chr10 50091874 50092324 -90224441 - L1PA3 LINE L1 -1027 5119 4692 * 7671 25 5 0 chr10 50092324 50093367 -90223398 + L1PA3 LINE L1 5109 6155 0 11834 181 59 27 chr10 50093392 50093819 -90222946 + L1MA4A LINE L1 2449 2861 -3987 2581 60 0 0 chr10 50093819 50094120 -90222645 + AluY SINE Alu 1 301 -10 11834 181 59 27 chr10 50094120 50097113 -90219652 + L1MA4A LINE L1 2861 5978 -870 694 95 36 22 chr10 50097213 50097350 -90219415 + L1MA4A LINE L1 5976 6114 -891 3542 130 89 6 chr10 50097378 50098031 -90218734 + L1MA4A LINE L1 6295 7001 -4 519 224 34 34 chr10 50098037 50098216 -90218549 + L1MCb LINE L1 614 792 -5253 1978 193 147 8 chr10 50098234 50099313 -90217452 + L1MCb LINE L1 1164 2579 -3985 484 271 70 20 chr10 50099791 50099962 -90216803 + MIR SINE MIR 35 213 -49 1713 188 17 0 chr10 50100460 50100758 -90216007 - AluJb SINE Alu -9 303 1 626 254 48 92 chr10 50104620 50104935 -90211830 - L2 LINE L2 -2 3311 3011 299 246 83 68 chr10 50105011 50105157 -90211608 - MIR SINE MIR -63 145 32 343 309 132 32 chr10 50105503 50105881 -90210884 + L2 LINE L2 2467 2882 -432 236 284 147 17 chr10 50106472 50106588 -90210177 + L2 LINE L2 3137 3267 -5 23 0 0 0 chr10 50108025 50108048 -90208717 + AT_rich Low_complexity Low_complexity 1 23 0 1637 263 107 57 chr10 50108075 50109081 -90207684 + HAL1 LINE L1 1317 2373 -134 315 303 84 42 chr10 50109097 50109239 -90207526 + HAL1 LINE L1 2343 2490 -17 364 278 63 8 chr10 50110018 50110160 -90206605 + MIR SINE MIR 5 151 -69 352 286 7 14 chr10 50110228 50110349 -90206416 + L1ME LINE L1 5609 5730 -391 1673 178 52 3 chr10 50110349 50110636 -90206129 + AluJo SINE Alu 1 301 -11 352 286 7 14 chr10 50110636 50110654 -90206111 + L1ME LINE L1 5730 5747 -374 198 330 70 10 chr10 50110673 50110773 -90205992 + MER5A DNA MER1_type 10 115 -74 428 326 41 84 chr10 50111032 50111376 -90205389 - L1MDa LINE L1 -6191 349 21 192 263 0 0 chr10 50112088 50112126 -90204639 - MIR SINE MIR -133 75 38 2009 109 13 26 chr10 50113491 50113802 -90202963 - AluSx SINE Alu -5 307 1 271 263 18 0 chr10 50114002 50114059 -90202706 + MIR SINE MIR 86 143 -65 180 0 0 0 chr10 50114859 50114879 -90201886 + (A)n Simple_repeat Simple_repeat 1 20 0 1299 252 105 32 chr10 50115069 50115715 -90201050 - L1MC4 LINE L1 -222 7820 7128 282 303 131 64 chr10 50116159 50116753 -90200012 + L2 LINE L2 2641 3256 -16 208 320 0 23 chr10 50117156 50117284 -90199481 + A-rich Low_complexity Low_complexity 1 125 0 2911 3 0 0 chr10 50118254 50118567 -90198198 + AluYb8 SINE Alu 1 313 -5 413 282 40 13 chr10 50119217 50119366 -90197399 + L2 LINE L2 2186 2338 -976 223 344 133 0 chr10 50119640 50119730 -90197035 + L2 LINE L2 3163 3264 -8 264 222 137 9 chr10 50119870 50119975 -90196790 - MIR SINE MIR -35 173 58 559 284 91 35 chr10 50120408 50120947 -90195818 + L1MC5 LINE L1 7310 7878 -83 216 188 0 0 chr10 50121850 50121898 -90194867 + A-rich Low_complexity Low_complexity 1 48 0 204 250 0 0 chr10 50123801 50123849 -90192916 + (TA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr10 50124239 50124261 -90192504 + AT_rich Low_complexity Low_complexity 1 22 0 1814 160 19 19 chr10 50125875 50125997 -90190768 + AluJo SINE Alu 1 122 -190 253 0 54 0 chr10 50125997 50126034 -90190731 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1814 160 19 19 chr10 50126034 50126223 -90190542 + AluJo SINE Alu 121 312 0 182 430 0 0 chr10 50126588 50126688 -90190077 + MIR SINE MIR 47 146 -62 283 294 47 0 chr10 50126942 50127027 -90189738 - MIR SINE MIR -71 191 103 518 304 75 73 chr10 50127329 50127393 -90189372 + L2 LINE L2 2601 2663 -650 1299 141 212 29 chr10 50127393 50127699 -90189066 + MLT1A1 LTR MaLR 1 362 -3 518 304 75 73 chr10 50127699 50128121 -90188644 + L2 LINE L2 2663 3106 -207 1758 147 0 11 chr10 50128316 50128589 -90188176 - AluJb SINE Alu -1 311 42 367 317 73 12 chr10 50129617 50129781 -90186984 - MIR SINE MIR -69 193 20 194 295 9 0 chr10 50130006 50130111 -90186654 + (TATG)n Simple_repeat Simple_repeat 2 107 0 491 276 79 53 chr10 50130399 50130627 -90186138 - L2 LINE L2 -43 3270 3037 201 329 12 24 chr10 50130701 50130786 -90185979 - L2 LINE L2 -478 2836 2753 186 239 268 0 chr10 50130816 50130887 -90185878 - L2 LINE L2 -666 2648 2559 547 200 16 56 chr10 50130887 50131012 -90185753 + FRAM SINE Alu 42 161 -15 501 303 71 24 chr10 50131080 50131291 -90185474 - MIR SINE MIR -34 228 8 21 0 0 0 chr10 50132278 50132299 -90184466 + AT_rich Low_complexity Low_complexity 1 21 0 336 282 81 8 chr10 50132456 50132580 -90184185 + MIR SINE MIR 81 213 -49 805 249 155 74 chr10 50134402 50134449 -90182316 + L2 LINE L2 2580 2622 -691 2192 99 24 0 chr10 50134449 50134742 -90182023 - AluSp SINE Alu -13 300 1 805 249 155 74 chr10 50134742 50135386 -90181379 + L2 LINE L2 2622 3313 0 303 303 92 28 chr10 50135396 50135505 -90181260 - L2 LINE L2 -25 3247 3132 191 318 47 28 chr10 50137285 50137392 -90179373 - MIR3 SINE MIR -41 167 59 2385 51 3 10 chr10 50140292 50140587 -90176178 + AluY SINE Alu 1 293 -18 27 29 0 0 chr10 50140810 50140844 -90175921 + AT_rich Low_complexity Low_complexity 1 34 0 353 289 70 23 chr10 50141017 50141145 -90175620 - MIR3 SINE MIR -48 160 27 1271 137 48 13 chr10 50141318 50141545 -90175220 + MER46A DNA MER2_type 1 235 -1 308 263 173 23 chr10 50141559 50141692 -90175073 + L1ME4a LINE L1 5967 6119 -2 323 281 0 58 chr10 50141831 50141952 -90174813 + MIR SINE MIR 114 227 -35 313 272 147 0 chr10 50142214 50142350 -90174415 - MER103 DNA DNA -6 160 5 1065 192 5 39 chr10 50142422 50142630 -90174135 - AluJo SINE Alu -29 283 83 2146 89 58 0 chr10 50143569 50143882 -90172883 - L1PA8 LINE L1 -3 6169 5839 5405 95 1 5 chr10 50143882 50144681 -90172084 + L1P LINE L1 4005 4800 -1346 2213 117 19 33 chr10 50145237 50145597 -90171168 + THE1A LTR MaLR 1 355 0 11473 94 10 5 chr10 50145597 50147168 -90169597 + THE1A-int LTR MaLR 1 1580 0 2334 123 14 3 chr10 50147168 50147519 -90169246 + THE1A LTR MaLR 1 355 0 16504 30 0 1 chr10 50148479 50150978 -90165787 + L1P2 LINE L1 3326 5822 -333 9505 72 49 14 chr10 50150978 50152290 -90164475 + SVA Other Other 29 1385 -1 226 70 70 0 chr10 50152290 50152333 -90164432 + L1MB7 LINE L1 6139 6184 0 31 0 0 0 chr10 50152411 50152442 -90164323 + AT_rich Low_complexity Low_complexity 1 31 0 2755 37 3 20 chr10 50152442 50152791 -90163974 + L1PA4 LINE L1 5812 6154 -1 23 54 0 0 chr10 50153044 50153081 -90163684 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr10 50153477 50153509 -90163256 + AT_rich Low_complexity Low_complexity 1 32 0 689 198 0 0 chr10 50153704 50153820 -90162945 + FLAM_C SINE Alu 3 118 -15 24 67 0 0 chr10 50153820 50153865 -90162900 + AT_rich Low_complexity Low_complexity 1 45 0 1517 162 81 26 chr10 50154136 50154407 -90162358 + AluSx SINE Alu 4 289 -23 326 230 97 92 chr10 50155519 50155715 -90161050 + L1ME4a LINE L1 5919 6115 -6 182 189 54 0 chr10 50157675 50157712 -90159053 + L2 LINE L2 2936 2974 -340 186 319 66 33 chr10 50157726 50157817 -90158948 + L2 LINE L2 3220 3313 0 352 390 42 25 chr10 50157877 50158113 -90158652 + L1MEd LINE L1 55 294 -5825 22 35 0 0 chr10 50158236 50158265 -90158500 + AT_rich Low_complexity Low_complexity 1 29 0 345 296 0 32 chr10 50158296 50158421 -90158344 + L1MEd LINE L1 651 771 -5348 1542 247 157 65 chr10 50158816 50160051 -90156714 + HAL1 LINE L1 25 1373 -1134 2113 111 37 3 chr10 50160687 50160985 -90155780 + AluSx SINE Alu 1 308 -4 3846 92 13 7 chr10 50161119 50161676 -90155089 - L1PA8 LINE L1 -1 6171 5612 5327 43 47 97 chr10 50161750 50161971 -90154794 + L1PA7 LINE L1 5106 5336 -818 5327 73 0 6 chr10 50161971 50162671 -90154094 + L1PA7 LINE L1 5456 6151 -3 5327 43 47 97 chr10 50162671 50162816 -90153949 + L1PA7 LINE L1 5336 6151 -3 183 122 49 98 chr10 50162868 50162909 -90153856 + L2 LINE L2 2744 2782 -532 2271 110 3 0 chr10 50164053 50164362 -90152403 - AluSx SINE Alu -2 310 1 1918 187 0 0 chr10 50164922 50165227 -90151538 + AluJb SINE Alu 1 305 -7 299 190 50 50 chr10 50165300 50165400 -90151365 + L1ME LINE L1 5383 5482 -639 440 350 123 9 chr10 50165435 50165481 -90151284 + L2 LINE L2 2507 2546 -767 6836 139 31 13 chr10 50165481 50166167 -90150598 - Tigger3b DNA MER2_type -1797 1231 513 2311 108 0 0 chr10 50166167 50166464 -90150301 + AluSc SINE Alu 1 297 -12 6836 139 31 13 chr10 50166464 50166986 -90149779 - Tigger3b DNA MER2_type -2515 513 2 440 350 123 9 chr10 50166986 50167448 -90149317 + L2 LINE L2 2546 3080 -233 784 198 67 18 chr10 50167466 50167736 -90149029 - MSTD LTR MaLR -86 310 1 518 277 26 7 chr10 50167743 50167898 -90148867 + L2 LINE L2 3151 3308 -5 21 0 0 0 chr10 50168069 50168090 -90148675 + AT_rich Low_complexity Low_complexity 1 21 0 2267 84 3 7 chr10 50168117 50168415 -90148350 + AluY SINE Alu 1 297 -14 269 245 38 0 chr10 50169881 50169946 -90146819 - L2 LINE L2 -14 3258 3210 753 204 224 117 chr10 50169976 50170623 -90146142 + L2 LINE L2 2338 3058 -255 754 202 0 0 chr10 50171578 50171702 -90145063 - FLAM_A SINE Alu -9 124 1 3646 45 0 5 chr10 50172142 50172588 -90144177 - L1PA5 LINE L1 -5 6149 5706 1716 205 35 37 chr10 50172761 50173190 -90143575 - MSTC LTR MaLR 0 428 1 1035 212 156 25 chr10 50173351 50173710 -90143055 - MLT1D LTR MaLR -3 502 97 249 263 0 0 chr10 50174360 50174417 -90142348 + L2 LINE L2 3257 3313 0 254 327 97 29 chr10 50174796 50175074 -90141691 + L1MC/D LINE L1 5550 5846 -1962 198 71 0 0 chr10 50175136 50175164 -90141601 + (TA)n Simple_repeat Simple_repeat 2 29 0 2103 141 7 0 chr10 50175805 50176102 -90140663 + AluSx SINE Alu 1 299 -13 269 148 0 99 chr10 50176413 50176494 -90140271 + MER113 DNA MER1_type? 46 118 -403 1629 206 7 3 chr10 50176543 50176835 -90139930 - AluJb SINE Alu -19 293 1 207 0 0 0 chr10 50176852 50176875 -90139890 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 219 139 0 0 chr10 50176971 50177007 -90139758 + (A)n Simple_repeat Simple_repeat 1 36 0 369 43 0 0 chr10 50178253 50178300 -90138465 + (CA)n Simple_repeat Simple_repeat 2 48 0 247 208 38 0 chr10 50178845 50178898 -90137867 - MIR SINE MIR -111 151 97 1256 196 75 4 chr10 50179630 50179896 -90136869 + MLT1A1 LTR MaLR 81 365 0 194 267 50 17 chr10 50179962 50180022 -90136743 + MIR SINE MIR 83 144 -64 393 217 17 8 chr10 50180067 50180187 -90136578 + CT-rich Low_complexity Low_complexity 1 121 0 1026 195 0 10 chr10 50180261 50180456 -90136309 - AluJo SINE Alu -119 193 1 1639 231 80 12 chr10 50180459 50180962 -90135803 - L1MC4a LINE L1 0 7808 7272 341 331 48 65 chr10 50181030 50181278 -90135487 + MIR SINE MIR 5 248 -14 233 303 165 21 chr10 50182542 50182730 -90134035 - MIR SINE MIR -1 261 47 214 234 0 0 chr10 50183219 50183266 -90133499 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 260 162 50 71 chr10 50183344 50183391 -90133374 + L1MC4a LINE L1 5866 5912 -1896 2562 131 15 0 chr10 50183391 50183788 -90132977 - MER57A LTR ERV1 0 403 1 260 162 50 71 chr10 50183788 50183839 -90132926 + L1MC4a LINE L1 5912 5962 -1846 1445 157 119 39 chr10 50184058 50184344 -90132421 + AluSx SINE Alu 1 309 -3 197 328 17 0 chr10 50184349 50184407 -90132358 + L2 LINE L2 3254 3312 -1 442 272 80 24 chr10 50184610 50184823 -90131942 + L1MA9 LINE L1 6050 6274 -38 180 354 83 0 chr10 50185160 50185256 -90131509 - MIR3 SINE MIR -49 159 56 21 0 0 0 chr10 50185519 50185540 -90131225 + AT_rich Low_complexity Low_complexity 1 21 0 880 179 0 54 chr10 50186190 50186358 -90130407 + FRAM SINE Alu 1 158 -18 5355 110 6 18 chr10 50187081 50187910 -90128855 + L1PA15 LINE L1 5347 6165 0 289 218 55 85 chr10 50188439 50188604 -90128161 + L1MC5 LINE L1 7744 7903 -58 189 261 58 72 chr10 50189358 50189427 -90127338 + L3 LINE CR1 1413 1480 -97 299 274 148 15 chr10 50192287 50192422 -90124343 + MIR SINE MIR 91 243 -19 32 0 0 0 chr10 50194123 50194155 -90122610 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr10 50194498 50194526 -90122239 + AT_rich Low_complexity Low_complexity 1 28 0 608 228 19 48 chr10 50194645 50194851 -90121914 + L1MB8 LINE L1 5921 6120 -58 367 270 50 85 chr10 50195090 50195408 -90121357 + L1ME4a LINE L1 5719 6025 -96 2421 71 0 3 chr10 50195452 50195749 -90121016 + AluY SINE Alu 1 296 -15 749 284 52 5 chr10 50195891 50196102 -90120663 + MIR SINE MIR 7 227 -35 513 0 0 0 chr10 50196102 50196159 -90120606 + (TA)n Simple_repeat Simple_repeat 1 57 0 1018 158 28 60 chr10 50196163 50196378 -90120387 - AluJo SINE Alu -22 290 83 366 273 211 19 chr10 50197015 50197224 -90119541 - MIR SINE MIR 0 262 14 219 222 0 0 chr10 50197658 50197703 -90119062 + CT-rich Low_complexity Low_complexity 1 45 0 1262 140 27 35 chr10 50197977 50198234 -90118531 - Tigger3(Golem) DNA MER2_type 0 3038 2784 200 202 11 43 chr10 50199353 50199447 -90117318 + C-rich Low_complexity Low_complexity 2 92 0 446 280 160 53 chr10 50199454 50199958 -90116807 - L1M2 LINE L1 -5621 1228 676 2045 122 44 0 chr10 50201332 50201651 -90115114 - L1PB3 LINE L1 0 6154 5822 240 278 139 0 chr10 50202114 50202186 -90114579 - L2 LINE L2 0 3313 3232 189 94 0 0 chr10 50202883 50202915 -90113850 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1421 196 25 7 chr10 50202928 50203203 -90113562 + AluJo SINE Alu 14 293 -19 393 332 34 45 chr10 50203212 50203567 -90113198 + L1MC4a LINE L1 5559 5909 -1899 186 189 0 0 chr10 50204621 50204658 -90112107 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 841 185 17 28 chr10 50204722 50204900 -90111865 + LTR41 LTR ERVL 1 176 -597 1265 226 30 89 chr10 50204935 50205306 -90111459 + LTR41 LTR ERVL 349 692 -81 1622 189 0 44 chr10 50205306 50205623 -90111142 - AluJo SINE Alu -9 303 1 1265 226 30 89 chr10 50205623 50205690 -90111075 + LTR41 LTR ERVL 692 761 -12 709 180 192 12 chr10 50206593 50206765 -90110000 + MER3 DNA MER1_type 1 203 -6 1060 135 23 222 chr10 50206928 50207092 -90109673 + AluJo SINE Alu 4 61 -240 1596 103 0 5 chr10 50207092 50207296 -90109469 + AluSg/x SINE Alu 87 289 -21 1060 135 23 222 chr10 50207296 50207498 -90109267 + AluJo SINE Alu 61 301 0 1518 126 40 18 chr10 50207711 50207989 -90108776 - L1MA4A LINE L1 -1 6302 6019 25 31 0 0 chr10 50211591 50211623 -90105142 + AT_rich Low_complexity Low_complexity 1 32 0 375 248 215 25 chr10 50211731 50211903 -90104862 - MIR SINE MIR -32 230 27 1061 185 9 22 chr10 50212112 50212334 -90104431 - MER20 DNA MER1_type 0 219 1 23 0 0 0 chr10 50212583 50212606 -90104159 + AT_rich Low_complexity Low_complexity 1 23 0 1478 187 58 22 chr10 50212722 50213000 -90103765 + AluJo SINE Alu 1 288 -24 593 204 25 70 chr10 50213139 50213296 -90103469 - MIR SINE MIR -26 236 87 250 373 87 13 chr10 50213440 50213590 -90103175 - L3 LINE CR1 -974 603 443 1172 61 0 0 chr10 50213592 50213739 -90103026 + AluY SINE Alu 149 295 -16 610 346 101 22 chr10 50213741 50214108 -90102657 - L3 LINE CR1 -1125 452 57 488 290 55 0 chr10 50214887 50215032 -90101733 + MIR SINE MIR 76 228 -34 189 0 0 0 chr10 50215442 50215463 -90101302 + (A)n Simple_repeat Simple_repeat 1 21 0 342 0 0 0 chr10 50216018 50216056 -90100709 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 300 274 247 16 chr10 50217349 50217469 -90099296 + MIR SINE MIR 20 111 -151 1175 149 88 58 chr10 50217469 50217798 -90098967 + MER44D DNA MER2_type 1 609 0 300 274 247 16 chr10 50217798 50217867 -90098898 + MIR SINE MIR 111 253 -9 207 365 0 0 chr10 50217960 50218034 -90098731 - MIR3 SINE MIR -15 193 120 251 283 85 28 chr10 50218534 50218640 -90098125 + MIR3 SINE MIR 4 115 -93 1161 200 73 27 chr10 50219927 50220323 -90096442 - MER54B LTR ERVL -2 791 477 225 339 90 17 chr10 50222510 50222687 -90094078 - MIR SINE MIR -12 250 61 5554 107 20 36 chr10 50223071 50223363 -90093402 + L1PA16 LINE L1 5047 5342 -824 1451 75 0 0 chr10 50223363 50223536 -90093229 + AluSp SINE Alu 130 302 -11 5554 107 20 36 chr10 50223536 50224357 -90092408 + L1PA16 LINE L1 5342 6157 -9 351 282 45 13 chr10 50224517 50224673 -90092092 + L1MC/D LINE L1 5646 5806 -2002 259 185 37 37 chr10 50224789 50224870 -90091895 + HAL1b LINE L1 1268 1348 0 2217 90 0 3 chr10 50225721 50226021 -90090744 + AluY SINE Alu 1 299 -12 270 81 0 0 chr10 50226592 50226629 -90090136 + (TG)n Simple_repeat Simple_repeat 2 38 0 649 276 47 54 chr10 50226680 50226977 -90089788 - MLT1I LTR MaLR -8 401 107 1849 163 70 3 chr10 50227421 50227764 -90089001 - MER47A DNA MER2_type 0 366 1 1794 157 62 9 chr10 50227794 50228118 -90088647 + MER7A DNA MER2_type 2 340 -6 462 36 0 0 chr10 50228293 50228349 -90088416 + (CA)n Simple_repeat Simple_repeat 2 57 0 305 269 111 14 chr10 50228788 50228996 -90087769 + L1ME4a LINE L1 5671 5898 -223 1667 197 74 22 chr10 50230752 50231158 -90085607 - MER63B DNA MER1_type -1 435 9 318 267 199 19 chr10 50231291 50231497 -90085268 - MIR SINE MIR -13 249 7 2290 75 3 30 chr10 50233199 50233504 -90083261 + AluY SINE Alu 1 297 -14 471 315 99 0 chr10 50233754 50233935 -90082830 + MIR SINE MIR 51 249 -13 210 37 0 0 chr10 50234356 50234383 -90082382 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 353 246 260 35 chr10 50234409 50234694 -90082071 + MARNA DNA Mariner 39 387 -199 2191 53 0 11 chr10 50234717 50234979 -90081786 - AluY SINE Alu -20 291 33 568 278 32 16 chr10 50235541 50235728 -90081037 + MIR SINE MIR 64 253 -9 584 219 17 34 chr10 50236004 50236123 -90080642 - MIR SINE MIR -145 117 1 1080 244 115 26 chr10 50236752 50237270 -90079495 + MLT1E LTR MaLR 8 593 0 371 262 24 16 chr10 50237961 50238087 -90078678 - MIR3 SINE MIR -1 207 81 191 305 17 0 chr10 50238502 50238561 -90078204 - L2 LINE L2 -4 3309 3250 32 26 0 0 chr10 50238870 50238909 -90077856 + AT_rich Low_complexity Low_complexity 1 39 0 1621 156 17 42 chr10 50239225 50239514 -90077251 - AluJo SINE Alu -30 282 1 376 274 18 9 chr10 50239515 50239628 -90077137 - MIR SINE MIR -38 224 111 344 111 37 0 chr10 50240661 50240715 -90076050 - L1PA7 LINE L1 -3 6151 6096 216 0 0 0 chr10 50240726 50240750 -90076015 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3831 89 9 2 chr10 50240789 50241327 -90075438 - L1PA13 LINE L1 -1 6162 5621 1235 164 0 0 chr10 50241333 50241552 -90075213 - L1PA13 LINE L1 -857 5289 5071 345 370 39 20 chr10 50241776 50241957 -90074808 - MIR SINE MIR -62 146 8 1590 262 79 34 chr10 50241963 50242886 -90073879 + L1ME2 LINE L1 1428 2353 -3862 314 170 56 11 chr10 50242889 50242990 -90073775 + L1ME2 LINE L1 3713 3817 -2398 * 2110 223 78 45 chr10 50242978 50243214 -90073551 + L1ME2 LINE L1 4829 5056 -1177 651 236 0 0 chr10 50243214 50243341 -90073424 + FLAM_A SINE Alu 1 127 -6 2110 223 78 45 chr10 50243341 50244008 -90072757 + L1ME2 LINE L1 5056 5792 -441 6744 116 25 16 chr10 50244008 50245069 -90071696 + MER11C LTR ERVK 1 1071 0 2110 223 78 45 chr10 50245069 50245404 -90071361 + L1ME2 LINE L1 5792 6115 -118 246 368 96 0 chr10 50245836 50245961 -90070804 - L2 LINE L2 -2 3270 3134 24 32 0 0 chr10 50246130 50246161 -90070604 + AT_rich Low_complexity Low_complexity 1 31 0 1201 145 36 0 chr10 50246231 50246452 -90070313 - L1MA8 LINE L1 -5 6286 6058 807 139 0 31 chr10 50246736 50246865 -90069900 + AluJb SINE Alu 167 291 -21 612 213 127 0 chr10 50246868 50247055 -90069710 - Charlie1b DNA MER1_type -205 318 101 2369 91 10 0 chr10 50247067 50247375 -90069390 + AluSp SINE Alu 1 311 -2 1168 155 16 1 chr10 50247382 50247635 -90069130 + L1MC/D LINE L1 5209 5465 -745 341 272 33 147 chr10 50248093 50248235 -90068530 + L2 LINE L2 2928 3085 -228 243 88 0 0 chr10 50248235 50248269 -90068496 + (TG)n Simple_repeat Simple_repeat 2 35 0 341 272 33 147 chr10 50248269 50248556 -90068209 + L2 LINE L2 3085 3308 -5 22 70 0 0 chr10 50249437 50249480 -90067285 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 50249689 50249718 -90067047 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 50250740 50250782 -90065983 + AT_rich Low_complexity Low_complexity 1 42 0 1274 251 69 123 chr10 50251282 50252017 -90064748 + L1MEd LINE L1 269 933 -5186 225 0 0 0 chr10 50252017 50252042 -90064723 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1274 251 69 123 chr10 50252042 50252348 -90064417 + L1MEd LINE L1 933 1254 -4865 835 112 6 25 chr10 50252352 50252513 -90064252 + (GGGA)n Simple_repeat Simple_repeat 3 160 0 231 114 0 0 chr10 50252655 50252690 -90064075 + (A)n Simple_repeat Simple_repeat 1 35 0 205 302 33 71 chr10 50252724 50252906 -90063859 - L2 LINE L2 -414 2900 2726 357 287 7 81 chr10 50253624 50253760 -90063005 + L2 LINE L2 3185 3310 -3 221 189 122 27 chr10 50253778 50253852 -90062913 - MER91C DNA MER1_type -31 109 29 286 196 184 54 chr10 50255809 50255977 -90060788 + L1ME4a LINE L1 5894 6083 -38 2074 145 34 0 chr10 50256019 50256377 -90060388 - L1PA16 LINE L1 0 6166 5797 2540 57 0 13 chr10 50256948 50257263 -90059502 - AluY SINE Alu 0 311 1 21 71 0 0 chr10 50257864 50257906 -90058859 + AT_rich Low_complexity Low_complexity 1 42 0 2502 58 0 0 chr10 50258016 50258308 -90058457 - AluSq SINE Alu -21 292 1 361 268 25 8 chr10 50258384 50258504 -90058261 + MIR SINE MIR 41 166 -42 1249 174 8 2 chr10 50260632 50260874 -90055891 + AluJo SINE Alu 1 292 -20 374 316 51 0 chr10 50261262 50261379 -90055386 + HAL1 LINE L1 8 130 -2377 4931 161 32 24 chr10 50261593 50262799 -90053966 + L1MB2 LINE L1 4957 6171 0 1286 177 60 47 chr10 50262803 50263048 -90053717 + MLT1D LTR MaLR 127 378 -127 2001 124 7 3 chr10 50263048 50263338 -90053427 - AluSx SINE Alu -21 291 1 1286 177 60 47 chr10 50263338 50263409 -90053356 + MLT1D LTR MaLR 378 447 -58 216 244 0 0 chr10 50263409 50263450 -90053315 + polypurine Low_complexity Low_complexity 2 42 0 1369 283 104 43 chr10 50263450 50264375 -90052390 + HAL1 LINE L1 364 1344 -1163 296 237 17 51 chr10 50264395 50264513 -90052252 + HAL1 LINE L1 1399 1512 -995 390 320 66 49 chr10 50264542 50264908 -90051857 + HAL1 LINE L1 2136 2507 0 261 139 0 0 chr10 50264919 50264962 -90051803 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 241 254 0 0 chr10 50266246 50266305 -90050460 - L1ME3A LINE L1 -175 5995 5937 209 289 86 31 chr10 50266719 50266847 -90049918 - MIR SINE MIR -57 205 71 230 155 14 113 chr10 50267610 50267681 -90049084 - MIR SINE MIR -115 147 84 266 242 0 0 chr10 50268665 50268727 -90048038 + MER117 DNA MER1_type 136 197 0 205 217 100 17 chr10 50270066 50270126 -90046639 - MIR SINE MIR -35 227 163 3496 165 84 24 chr10 50270687 50271426 -90045339 - L1MA7 LINE L1 0 6291 5509 22 0 0 0 chr10 50271901 50271923 -90044842 + AT_rich Low_complexity Low_complexity 1 22 0 330 26 0 0 chr10 50273333 50273372 -90043393 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 589 247 111 42 chr10 50273735 50274052 -90042713 + LTR37B LTR ERV1 124 468 0 2008 137 119 10 chr10 50274178 50274564 -90042201 + MSTA LTR MaLR 1 428 0 1873 131 0 74 chr10 50274577 50274889 -90041876 + AluSx SINE Alu 5 293 -19 373 78 0 31 chr10 50274889 50274953 -90041812 + (GGGGA)n Simple_repeat Simple_repeat 2 63 0 744 148 0 30 chr10 50274953 50275088 -90041677 + MSTA-int LTR MaLR 4 134 -1446 * 6790 156 8 14 chr10 50275078 50276185 -90040580 + MSTA-int LTR MaLR 480 1580 0 2236 139 108 8 chr10 50276185 50276574 -90040191 + MSTA LTR MaLR 1 428 0 229 297 47 20 chr10 50278188 50278336 -90038429 - L1ME4a LINE L1 -4 6117 5966 21 0 0 0 chr10 50278373 50278394 -90038371 + AT_rich Low_complexity Low_complexity 1 21 0 24937 163 33 30 chr10 50278966 50281680 -90035085 + L1PA10 LINE L1 23 2728 -3755 2246 122 0 0 chr10 50281680 50281984 -90034781 - AluSx SINE Alu -8 304 1 24937 163 33 30 chr10 50281984 50284224 -90032541 + L1PA10 LINE L1 2728 5081 -1402 2109 146 0 0 chr10 50284224 50284532 -90032233 + AluSx SINE Alu 3 310 -2 24937 163 33 30 chr10 50284532 50285788 -90030977 + L1PA10 LINE L1 5081 6332 -151 2482 83 9 0 chr10 50285788 50286110 -90030655 + L1PA10 LINE L1 5841 6167 -1 27 0 0 0 chr10 50286127 50286154 -90030611 + AT_rich Low_complexity Low_complexity 1 27 0 1969 149 0 3 chr10 50286572 50286919 -90029846 - AluSx SINE Alu 0 312 1 2354 110 0 0 chr10 50288298 50288608 -90028157 + AluSg SINE Alu 1 310 0 203 261 60 90 chr10 50288672 50288806 -90027959 + MIR3 SINE MIR 38 167 -41 394 252 53 30 chr10 50288972 50289103 -90027662 + MER20B DNA MER1_type 31 164 -619 259 276 52 82 chr10 50289142 50289276 -90027489 + MIR SINE MIR 73 202 -60 269 159 250 57 chr10 50289279 50289367 -90027398 + MIR SINE MIR 49 153 -109 1388 201 6 46 chr10 50289669 50289993 -90026772 + AluJo SINE Alu 1 311 -1 10634 123 15 67 chr10 50290153 50291509 -90025256 + L1PA12 LINE L1 3371 4795 -1373 522 224 32 32 chr10 50291509 50291665 -90025100 + LTR9 LTR ERV1 457 612 0 10634 123 15 67 chr10 50291665 50292408 -90024357 + L1PA12 LINE L1 4795 5431 -737 2064 119 3 10 chr10 50292408 50292702 -90024063 - AluSg SINE Alu -18 292 1 10634 123 15 67 chr10 50292702 50293347 -90023418 + L1PA12 LINE L1 5431 6108 -60 2756 26 0 0 chr10 50293359 50293666 -90023099 + AluYa5 SINE Alu 1 307 -4 1379 93 0 34 chr10 50293675 50293879 -90022886 + AluY SINE Alu 115 311 0 311 318 115 16 chr10 50294162 50294414 -90022351 + L1MC4a LINE L1 5636 5912 -1896 26 50 0 0 chr10 50294582 50294622 -90022143 + AT_rich Low_complexity Low_complexity 1 40 0 389 295 19 64 chr10 50295327 50295483 -90021282 + MIR SINE MIR 39 187 -75 2304 92 3 3 chr10 50296115 50296410 -90020355 + AluSq SINE Alu 1 295 -18 4605 134 28 3 chr10 50296911 50297618 -90019147 - L1MB3 LINE L1 -3 6180 5456 338 354 54 0 chr10 50297835 50297982 -90018783 + MIR SINE MIR 90 244 -18 2197 99 0 3 chr10 50298491 50298808 -90017957 + AluSg SINE Alu 1 316 0 182 244 85 24 chr10 50299132 50299214 -90017551 - MIR SINE MIR -30 232 146 2105 95 5 8 chr10 50301946 50302306 -90014459 + LTR7 LTR ERV1 1 448 -2 398 252 16 49 chr10 50302821 50302944 -90013821 - MER5A DNA MER1_type -54 135 17 236 197 91 15 chr10 50303117 50303183 -90013582 - MIR SINE MIR -148 114 44 1744 150 38 24 chr10 50303542 50303829 -90012936 + AluJb SINE Alu 1 291 -21 581 279 228 17 chr10 50304194 50304492 -90012273 - L2 LINE L2 -4 3309 2949 331 317 103 38 chr10 50304638 50304979 -90011786 + L2 LINE L2 2950 3312 -1 206 342 0 0 chr10 50305389 50305468 -90011297 - MIR SINE MIR 0 262 184 253 213 0 16 chr10 50305669 50305730 -90011035 - MIR SINE MIR -87 121 62 212 352 36 82 chr10 50307425 50307644 -90009121 + L2 LINE L2 3060 3268 -4 451 251 31 18 chr10 50308489 50308506 -90008259 - L1MA10 LINE L1 0 6334 6318 3366 192 47 17 chr10 50308506 50309231 -90007534 - L1ME1 LINE L1 -6 6160 5414 753 204 64 54 chr10 50309216 50309533 -90007232 - L1MD3 LINE L1 0 7984 6058 * 187 329 27 14 chr10 50309737 50309810 -90006955 - L2 LINE L2 -30 3242 3169 321 26 0 0 chr10 50309850 50309888 -90006877 + (CA)n Simple_repeat Simple_repeat 1 38 0 183 204 222 0 chr10 50310569 50310623 -90006142 + L2 LINE L2 3241 3306 -7 21 36 0 0 chr10 50312357 50312385 -90004380 + AT_rich Low_complexity Low_complexity 1 28 0 603 234 69 14 chr10 50312901 50313046 -90003719 + MLT1J LTR MaLR 8 160 -351 947 141 32 43 chr10 50313061 50313246 -90003519 - MLT1D LTR MaLR -322 183 1 538 137 84 0 chr10 50313246 50313340 -90003425 + Charlie1 DNA MER1_type 2660 2761 0 260 288 47 33 chr10 50313372 50313498 -90003267 - MIR SINE MIR -73 135 15 809 303 42 15 chr10 50315832 50316307 -90000458 + L1MEd LINE L1 769 1256 -4863 403 344 172 17 chr10 50316327 50316682 -90000083 + L1MEd LINE L1 1318 1727 -4583 2062 106 28 7 chr10 50317020 50317323 -89999442 - AluSq SINE Alu 0 313 1 353 252 29 17 chr10 50317463 50317595 -89999170 + L1ME LINE L1 5372 5485 -677 1667 183 28 0 chr10 50318712 50318996 -89997769 + AluJb SINE Alu 1 292 -20 261 328 78 11 chr10 50319055 50319237 -89997528 - MIR SINE MIR -50 212 20 1487 170 106 3 chr10 50319491 50319774 -89996991 - AluJo SINE Alu 0 312 1 3279 238 65 65 chr10 50319782 50321052 -89995713 - L1MC4 LINE L1 0 8042 6773 592 325 29 10 chr10 50321506 50321817 -89994948 - L1MEc LINE L1 -6022 374 58 546 254 51 41 chr10 50323142 50323339 -89993426 - MIR SINE MIR -1 261 63 188 372 13 0 chr10 50324366 50324444 -89992321 + L3b LINE CR1 1296 1374 -209 1923 155 150 13 chr10 50324694 50325068 -89991697 - MSTA LTR MaLR 0 428 4 255 271 144 17 chr10 50325141 50325259 -89991506 + MIR SINE MIR 130 262 0 2497 84 0 0 chr10 50325389 50325698 -89991067 + AluSc SINE Alu 1 309 0 210 295 66 0 chr10 50325885 50325946 -89990819 - MIR SINE MIR -2 260 196 823 237 25 5 chr10 50325974 50326172 -89990593 - MIR SINE MIR -59 203 2 354 284 33 49 chr10 50326439 50326580 -89990185 + MIR SINE MIR 16 151 -57 32 26 0 0 chr10 50326618 50326657 -89990108 + AT_rich Low_complexity Low_complexity 1 39 0 296 274 60 0 chr10 50326985 50327069 -89989696 - MIR SINE MIR -63 145 57 341 186 106 6 chr10 50327223 50327459 -89989306 + AluJ SINE Alu 1 299 -3 192 321 90 67 chr10 50327901 50328035 -89988730 + L2 LINE L2 3133 3269 -3 1811 165 0 7 chr10 50329094 50329385 -89987380 - AluJo SINE Alu -19 293 5 21 0 0 0 chr10 50329977 50329998 -89986767 + AT_rich Low_complexity Low_complexity 1 21 0 329 276 105 13 chr10 50330425 50330577 -89986188 - MIR SINE MIR -74 188 23 3235 174 39 5 chr10 50330608 50330830 -89985935 + MER6A DNA MER2_type 1 214 -651 441 0 0 0 chr10 50330830 50330879 -89985886 + (TG)n Simple_repeat Simple_repeat 2 50 0 3235 174 39 5 chr10 50330879 50331241 -89985524 + MER6A DNA MER2_type 214 605 0 208 364 116 25 chr10 50331504 50331625 -89985140 - L2 LINE L2 -19 3253 3122 27 0 0 0 chr10 50332284 50332311 -89984454 + AT_rich Low_complexity Low_complexity 1 27 0 663 244 0 0 chr10 50332508 50332635 -89984130 + FLAM_A SINE Alu 1 127 -6 532 247 209 4 chr10 50333090 50333353 -89983412 + L1ME4a LINE L1 5581 5897 -224 182 329 47 35 chr10 50333445 50333530 -89983235 + L2 LINE L2 3185 3270 -2 2025 117 11 0 chr10 50333556 50333839 -89982926 + AluSx SINE Alu 1 286 -26 2368 84 0 14 chr10 50333975 50334272 -89982493 - AluSc SINE Alu -16 293 1 1640 180 48 0 chr10 50334657 50334952 -89981813 + AluJo SINE Alu 1 309 -3 300 289 60 34 chr10 50335131 50335280 -89981485 - L1ME4a LINE L1 -9 6112 5960 248 250 150 39 chr10 50335441 50335621 -89981144 - L1ME4a LINE L1 -318 5803 5604 210 37 0 0 chr10 50336044 50336071 -89980694 + (TA)n Simple_repeat Simple_repeat 1 27 0 1517 38 0 56 chr10 50336071 50336273 -89980492 - L1PA5 LINE L1 -9 6145 5954 718 164 0 0 chr10 50336594 50336704 -89980061 + FRAM SINE Alu 33 142 -34 2341 73 0 3 chr10 50336793 50337082 -89979683 + AluY SINE Alu 14 301 -10 377 312 81 6 chr10 50338134 50338307 -89978458 - MER5A DNA MER1_type -3 186 1 219 200 20 0 chr10 50339038 50339088 -89977677 - L2 LINE L2 0 3313 3263 213 121 0 0 chr10 50341237 50341270 -89975495 + (CA)n Simple_repeat Simple_repeat 2 34 0 42 36 0 0 chr10 50341312 50341368 -89975397 + AT_rich Low_complexity Low_complexity 1 56 0 192 77 0 0 chr10 50341462 50341488 -89975277 + (A)n Simple_repeat Simple_repeat 1 26 0 700 191 83 0 chr10 50342741 50342909 -89973856 - MIR SINE MIR 0 262 81 2882 127 41 51 chr10 50343919 50344036 -89972729 - MER84 LTR ERV1 0 507 390 2198 108 7 7 chr10 50344036 50344341 -89972424 - AluSx SINE Alu -7 305 1 2882 127 41 51 chr10 50344341 50344735 -89972030 - MER84 LTR ERV1 -117 390 1 4692 39 2 0 chr10 50344924 50345488 -89971277 + L1PA4 LINE L1 5590 6154 -1 4784 139 20 4 chr10 50345890 50346734 -89970031 + L1PA11 LINE L1 3230 4087 -2059 290 116 0 0 chr10 50346734 50346777 -89969988 - MSTA LTR MaLR 0 428 386 6234 88 23 2 chr10 50346777 50348322 -89968443 + L1PA11 LINE L1 4603 6169 -5 4848 157 55 9 chr10 50349322 50350304 -89966461 + L1MC3 LINE L1 6759 7785 0 315 266 5 116 chr10 50350398 50350537 -89966228 + L2 LINE L2 2638 2750 -564 860 228 122 0 chr10 50350537 50350734 -89966031 - MER58A DNA MER1_type -3 221 1 315 266 5 116 chr10 50350734 50350793 -89965972 + L2 LINE L2 2750 2814 -500 520 242 70 19 chr10 50351003 50351160 -89965605 + MER103 DNA DNA 2 166 0 1184 184 97 60 chr10 50351263 50351633 -89965132 + MLT1D LTR MaLR 1 384 -121 247 178 0 0 chr10 50351631 50351676 -89965089 + MLT1D LTR MaLR 573 617 -9 * 679 274 54 50 chr10 50351824 50352083 -89964682 + MIR SINE MIR 3 262 0 385 200 0 0 chr10 50353431 50353516 -89963249 - L1MC4a LINE L1 -1911 5897 5813 227 274 41 14 chr10 50353528 50353601 -89963164 - MIR3 SINE MIR -6 202 128 778 283 186 12 chr10 50354814 50355228 -89961537 - L2 LINE L2 0 3313 2828 1366 212 96 24 chr10 50355289 50355902 -89960863 - MER99 DNA DNA 0 828 100 417 174 46 64 chr10 50356342 50356451 -89960314 - LTR40b LTR ERVL -260 202 96 494 230 79 51 chr10 50356596 50356774 -89959991 - MIR SINE MIR -65 197 15 2439 150 14 2 chr10 50357209 50357628 -89959137 + Tigger2a DNA MER2_type 1 424 -10 205 337 76 0 chr10 50358101 50358193 -89958572 - MIR SINE MIR -83 179 81 268 146 31 52 chr10 50358648 50358744 -89958021 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 202 146 92 12 chr10 50358748 50358912 -89957853 + (TA)n Simple_repeat Simple_repeat 1 177 0 193 85 0 43 chr10 50358916 50358963 -89957802 + (TTA)n Simple_repeat Simple_repeat 3 47 0 * 299 142 99 0 chr10 50358952 50359114 -89957651 + (TA)n Simple_repeat Simple_repeat 2 179 0 224 145 75 25 chr10 50359156 50359315 -89957450 + (TA)n Simple_repeat Simple_repeat 1 167 0 186 337 163 10 chr10 50359714 50359812 -89956953 + MIR SINE MIR 31 143 -65 569 277 131 19 chr10 50359817 50360023 -89956742 - MIR SINE MIR -19 243 15 284 273 34 23 chr10 50360000 50360088 -89956677 + MIR3 SINE MIR 113 201 -7 * 334 334 0 4 chr10 50360845 50360945 -89955820 - MER5A DNA MER1_type -48 141 34 232 295 0 0 chr10 50360961 50361022 -89955743 + (CACG)n Simple_repeat Simple_repeat 3 63 0 2415 42 0 3 chr10 50361159 50361448 -89955317 - AluY SINE Alu -23 288 1 2864 3 0 0 chr10 50362066 50362375 -89954390 + AluYa5 SINE Alu 1 309 -2 317 221 61 38 chr10 50362829 50362960 -89953805 + L1ME3A LINE L1 5962 6095 -75 206 0 0 65 chr10 50363362 50363393 -89953372 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 571 27 0 0 chr10 50363401 50363476 -89953289 - L1PA2 LINE L1 0 6155 6081 269 339 74 16 chr10 50363760 50363881 -89952884 + L2 LINE L2 3138 3265 -7 29 0 0 0 chr10 50363884 50363913 -89952852 + AT_rich Low_complexity Low_complexity 1 29 0 219 356 0 0 chr10 50364117 50364176 -89952589 + MIR SINE MIR 13 71 -191 199 250 16 31 chr10 50365120 50365184 -89951581 - L2 LINE L2 0 3313 3251 1179 209 103 31 chr10 50365318 50365518 -89951247 + MER2 DNA MER2_type 1 235 -109 2228 93 0 0 chr10 50365518 50365849 -89950916 - AluSg SINE Alu 0 331 1 1179 209 103 31 chr10 50365849 50365968 -89950797 + MER2 DNA MER2_type 235 344 0 376 254 125 97 chr10 50365999 50366318 -89950447 + MER102b DNA MER1_type 14 341 0 207 219 16 16 chr10 50366914 50366978 -89949787 + (TGAA)n Simple_repeat Simple_repeat 1 64 0 698 169 8 0 chr10 50367167 50367285 -89949480 + FLAM_A SINE Alu 5 123 -10 3601 48 4 9 chr10 50367463 50367917 -89948848 + L1PA7 LINE L1 5703 6154 0 24 0 0 0 chr10 50368290 50368314 -89948451 + AT_rich Low_complexity Low_complexity 1 24 0 1515 188 7 36 chr10 50369256 50369559 -89947206 + AluJo SINE Alu 1 294 -18 34 0 0 0 chr10 50369565 50369599 -89947166 + AT_rich Low_complexity Low_complexity 1 34 0 216 208 21 21 chr10 50370214 50370262 -89946503 - L2 LINE L2 -22 3291 3244 269 286 17 8 chr10 50370266 50370385 -89946380 + (TA)n Simple_repeat Simple_repeat 2 121 0 356 261 158 30 chr10 50370392 50370557 -89946208 - MIR SINE MIR -58 204 19 220 239 0 45 chr10 50371093 50371160 -89945605 + GA-rich Low_complexity Low_complexity 1 64 0 4531 186 83 42 chr10 50371585 50373385 -89943380 + L1MA10 LINE L1 3885 5611 -723 932 154 0 0 chr10 50373385 50373541 -89943224 + L1MA5A LINE L1 6139 6294 -3 4531 186 83 42 chr10 50373541 50373568 -89943197 + L1MA10 LINE L1 5611 5635 -699 198 0 0 0 chr10 50373568 50373590 -89943175 + (TA)n Simple_repeat Simple_repeat 1 22 0 4531 186 83 42 chr10 50373590 50373876 -89942889 + L1MA10 LINE L1 5635 5908 -426 1735 161 35 0 chr10 50373876 50374161 -89942604 + AluJo SINE Alu 1 295 -17 4531 186 83 42 chr10 50374161 50374385 -89942380 + L1MA10 LINE L1 5908 6323 -11 189 0 0 0 chr10 50376415 50376436 -89940329 + (TTTCC)n Simple_repeat Simple_repeat 1 21 0 567 291 64 0 chr10 50377326 50377529 -89939236 + HAL1 LINE L1 1 216 -2291 * 3076 242 119 32 chr10 50377521 50378779 -89937986 + HAL1 LINE L1 790 2157 -350 200 280 54 43 chr10 50379049 50379142 -89937623 - MIR SINE MIR -61 147 54 244 167 0 0 chr10 50379242 50379284 -89937481 - MER5A DNA MER1_type 0 189 148 1232 185 8 28 chr10 50379284 50379538 -89937227 + L1MB2 LINE L1 5915 6163 -8 746 187 73 0 chr10 50379552 50379702 -89937063 - MER5A DNA MER1_type -28 161 1 289 214 0 89 chr10 50379753 50379865 -89936900 + MER5B DNA MER1_type 73 174 -4 228 256 214 17 chr10 50379958 50380075 -89936690 + MIR SINE MIR 114 253 -9 600 295 110 8 chr10 50381602 50381839 -89934926 - MIR SINE MIR 0 262 2 232 249 96 86 chr10 50381938 50382147 -89934618 + MLT1K LTR MaLR 20 230 -358 453 217 48 48 chr10 50382206 50382372 -89934393 + MLT1K LTR MaLR 404 569 -19 2384 89 0 3 chr10 50382822 50383125 -89933640 + AluSg SINE Alu 1 302 -8 312 79 0 0 chr10 50384316 50384354 -89932411 - U2 snRNA snRNA -150 38 1 199 319 223 0 chr10 50384368 50384462 -89932303 + L2 LINE L2 3158 3272 0 860 173 16 54 chr10 50384555 50384740 -89932025 - MER58A DNA MER1_type 0 224 47 249 267 13 13 chr10 50384913 50384988 -89931777 + Charlie8 DNA MER1_type 2343 2417 0 704 223 50 71 chr10 50385471 50385754 -89931011 + L1ME3A LINE L1 5722 5998 -172 1141 146 0 25 chr10 50385754 50385953 -89930812 + Tigger2 DNA MER2_type 1 194 -2524 2189 84 33 0 chr10 50385957 50386232 -89930533 + AluSg SINE Alu 1 284 -26 423 0 0 0 chr10 50386238 50386285 -89930480 + (TG)n Simple_repeat Simple_repeat 2 48 0 642 142 110 31 chr10 50386287 50386414 -89930351 + Tigger2 DNA MER2_type 2572 2708 -10 756 185 76 0 chr10 50386414 50386571 -89930194 + L1ME3A LINE L1 5997 6165 -5 2291 123 0 3 chr10 50387326 50387635 -89929130 - AluSx SINE Alu -4 308 1 1095 162 22 0 chr10 50387887 50388066 -89928699 - AluJo SINE Alu -31 281 99 1852 150 7 10 chr10 50388082 50388376 -89928389 - AluJb SINE Alu -19 293 1 407 258 89 40 chr10 50388509 50388734 -89928031 + L1MC4 LINE L1 7807 8042 0 895 129 27 0 chr10 50389109 50389256 -89927509 - L1MA9 LINE L1 -4 6308 6158 311 154 19 0 chr10 50389256 50389308 -89927457 - U7 snRNA snRNA 0 63 11 599 113 181 23 chr10 50389308 50389441 -89927324 - L1MA9 LINE L1 -132 6180 6027 204 304 104 9 chr10 50389764 50389879 -89926886 - MIR SINE MIR -72 190 65 203 227 0 30 chr10 50390072 50390138 -89926627 + (TTA)n Simple_repeat Simple_repeat 3 66 0 323 292 110 13 chr10 50390325 50390479 -89926286 - Tigger8 DNA MER2_type -386 280 112 820 156 58 0 chr10 50391226 50391380 -89925385 + AluSg/x SINE Alu 140 302 -7 1333 98 4 90 chr10 50391410 50391644 -89925121 - AluJb SINE Alu -13 299 86 711 182 6 50 chr10 50391654 50391835 -89924930 - AluSg/x SINE Alu 0 312 140 227 226 21 32 chr10 50391939 50392032 -89924733 + CT-rich Low_complexity Low_complexity 5 96 0 992 186 0 0 chr10 50392460 50392621 -89924144 + FRAM SINE Alu 8 168 -8 678 81 0 0 chr10 50393684 50393771 -89922994 - AluS SINE Alu -224 88 2 1027 41 0 0 chr10 50395013 50395136 -89921629 - L1PA4 LINE L1 -143 6012 5890 * 1187 246 80 12 chr10 50395131 50395542 -89921223 - L1M4 LINE L1 -2116 4030 3592 283 226 33 90 chr10 50395569 50395781 -89920984 + MLT1A2 LTR MaLR 1 200 -174 469 269 78 34 chr10 50396220 50396488 -89920277 - L1M4 LINE L1 -979 5167 4888 939 119 0 8 chr10 50396580 50396714 -89920051 + FLAM_C SINE Alu 1 133 0 1457 176 39 14 chr10 50396726 50397010 -89919755 + AluJb SINE Alu 1 291 -21 1307 196 34 50 chr10 50397610 50397967 -89918798 - MLT1A2 LTR MaLR 0 374 24 1268 184 5 0 chr10 50400383 50400601 -89916164 - MER20 DNA MER1_type 0 219 1 213 331 14 14 chr10 50401389 50401531 -89915234 + GA-rich Low_complexity Low_complexity 2 143 0 271 196 8 165 chr10 50401724 50401984 -89914781 + MLT1A2 LTR MaLR 375 593 0 574 102 0 41 chr10 50402103 50402256 -89914509 - AluY SINE Alu 0 311 197 1626 88 5 9 chr10 50403353 50403568 -89913197 + AluSx SINE Alu 1 214 -98 2409 110 36 33 chr10 50404267 50404630 -89912135 + THE1B LTR MaLR 1 364 0 310 330 37 24 chr10 50407033 50407327 -89909438 + L2 LINE L2 2439 2736 -578 236 244 50 107 chr10 50407409 50407708 -89909057 + L2 LINE L2 2911 3192 -121 355 293 48 6 chr10 50408253 50408420 -89908345 + MER63 DNA MER1_type 469 642 -419 2164 139 8 8 chr10 50409840 50410199 -89906566 + MER46B DNA MER2_type 3 236 0 286 355 27 0 chr10 50410260 50410370 -89906395 + MIR SINE MIR 20 132 -130 527 221 35 75 chr10 50410892 50411091 -89905674 + L1ME3A LINE L1 5808 5998 -172 1036 137 0 54 chr10 50411091 50411296 -89905469 + Tigger2 DNA MER2_type 1 194 -2524 2135 87 32 4 chr10 50411300 50411577 -89905188 + AluSg SINE Alu 1 285 -25 226 85 21 21 chr10 50411597 50411644 -89905121 + (CTG)n Simple_repeat Simple_repeat 1 47 0 199 342 75 12 chr10 50412776 50412937 -89903828 + MIR SINE MIR 63 233 -29 210 269 30 0 chr10 50413091 50413158 -89903607 - MIR SINE MIR -135 127 59 1095 178 9 28 chr10 50414442 50414655 -89902110 - AluJo SINE Alu -103 209 1 409 228 102 24 chr10 50415367 50415494 -89901271 + MIR SINE MIR 21 157 -105 230 0 33 0 chr10 50415510 50415540 -89901225 + (TTAAA)n Simple_repeat Simple_repeat 4 34 0 386 200 126 0 chr10 50415847 50415982 -89900783 - AluSg/x SINE Alu -76 224 73 284 198 0 86 chr10 50416274 50416355 -89900410 + MER20 DNA MER1_type 94 167 -52 357 146 0 0 chr10 50416381 50416436 -89900329 + MER20 DNA MER1_type 164 218 -1 1947 272 78 24 chr10 50416436 50417833 -89898932 - L1MDa LINE L1 -3544 2996 1557 241 236 0 113 chr10 50418981 50419087 -89897678 + MIR SINE MIR 47 140 -122 552 274 40 48 chr10 50419964 50420216 -89896549 + MIR SINE MIR 13 262 0 442 255 206 57 chr10 50423503 50423785 -89892980 + MLT1H LTR MaLR 219 542 -7 518 331 50 73 chr10 50425199 50425719 -89891046 + L1MEd LINE L1 617 1124 -4995 195 129 0 0 chr10 50425828 50425859 -89890906 + (CA)n Simple_repeat Simple_repeat 2 32 0 306 333 26 0 chr10 50425908 50426061 -89890704 + HAL1 LINE L1 1474 1630 -877 2170 133 0 0 chr10 50426071 50426373 -89890392 + AluSx SINE Alu 2 303 -9 337 287 31 54 chr10 50426877 50427009 -89889756 + L1MEd LINE L1 2607 2735 -3394 4870 70 31 0 chr10 50428359 50429006 -89887759 - PABL_B LTR ERV1 0 667 1 23 86 0 0 chr10 50429227 50429285 -89887480 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr10 50429492 50429513 -89887252 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 50429576 50429629 -89887136 + AT_rich Low_complexity Low_complexity 1 53 0 692 232 92 0 chr10 50430760 50430945 -89885820 + L1MC2 LINE L1 6066 6267 -77 1059 209 58 15 chr10 50433004 50433333 -89883432 - MER33 DNA MER1_type -28 296 1 194 261 62 15 chr10 50433386 50433451 -89883314 - L2 LINE L2 -182 3090 3023 842 148 0 0 chr10 50433740 50433862 -89882903 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr10 50433862 50433883 -89882882 + AT_rich Low_complexity Low_complexity 1 21 0 1441 188 32 49 chr10 50433963 50434308 -89882457 + MER44D DNA MER2_type 1 609 0 255 79 0 0 chr10 50434482 50434520 -89882245 + (TG)n Simple_repeat Simple_repeat 2 39 0 225 206 29 29 chr10 50435025 50435093 -89881672 + GA-rich Low_complexity Low_complexity 4 71 0 4892 191 32 15 chr10 50435840 50436506 -89880259 + L1MA7 LINE L1 4285 4939 -1352 2761 96 0 0 chr10 50436506 50436870 -89879895 + THE1B LTR MaLR 1 364 0 4892 191 32 15 chr10 50436870 50438181 -89878584 + L1MA7 LINE L1 4939 6291 0 483 293 116 31 chr10 50438461 50438885 -89877880 + L1M4 LINE L1 4892 5351 -795 2703 17 0 0 chr10 50439188 50439490 -89877275 + AluYa5 SINE Alu 1 302 -9 32 0 0 0 chr10 50439825 50439857 -89876908 + AT_rich Low_complexity Low_complexity 1 32 0 195 139 0 0 chr10 50439991 50440027 -89876738 + (CA)n Simple_repeat Simple_repeat 1 36 0 1780 218 16 19 chr10 50440030 50440406 -89876359 - MER82 DNA MER2_type -1 652 278 276 289 114 0 chr10 50441361 50441475 -89875290 - LTR16C LTR ERVL -5 486 360 233 286 0 0 chr10 50441532 50441588 -89875177 - LTR16C LTR ERVL -269 222 167 417 328 75 70 chr10 50442058 50442684 -89874081 - HAL1 LINE L1 -1063 1444 816 893 251 45 52 chr10 50443396 50443858 -89872907 + L1 LINE L1 2716 3174 -2972 768 153 8 0 chr10 50443874 50444005 -89872760 + FLAM_C SINE Alu 11 142 -1 6884 218 24 13 chr10 50444020 50445519 -89871246 + L1MA1 LINE L1 15 1529 -6036 10998 124 32 20 chr10 50445521 50447510 -89869255 + L1MA1 LINE L1 1735 3740 -3825 7922 191 52 6 chr10 50447483 50449226 -89867539 + L1MA1 LINE L1 4245 6067 -1498 * 636 136 0 9 chr10 50449220 50449330 -89867435 + L1MA1 LINE L1 7134 7242 -479 * 291 121 0 7 chr10 50449333 50449389 -89867376 - L1P4 LINE L1 -339 5827 5774 31 44 0 0 chr10 50449403 50449448 -89867317 + AT_rich Low_complexity Low_complexity 1 45 0 343 53 4 0 chr10 50449462 50449522 -89867243 - L1M3 LINE L1 -708 5446 5394 2875 94 19 17 chr10 50449571 50450038 -89866727 + L1MA1 LINE L1 7247 7714 -7 854 216 0 0 chr10 50450055 50450217 -89866548 + FRAM SINE Alu 1 154 -22 5091 180 32 11 chr10 50450233 50451285 -89865480 + L1 LINE L1 3177 4251 -1895 353 290 43 7 chr10 50451438 50451576 -89865189 - L1M4 LINE L1 -1977 4169 4027 * 8064 64 121 8 chr10 50451573 50452746 -89864019 + L1P LINE L1 46 1351 -4795 2201 106 0 3 chr10 50453567 50453859 -89862906 + AluSg SINE Alu 1 291 -19 290 277 0 12 chr10 50453989 50454072 -89862693 + (TA)n Simple_repeat Simple_repeat 2 83 0 270 191 11 34 chr10 50454083 50454172 -89862593 + (TATG)n Simple_repeat Simple_repeat 2 88 0 501 297 95 11 chr10 50454936 50455481 -89861284 + L1ME LINE L1 4961 5544 -620 21 57 0 0 chr10 50455871 50455906 -89860859 + AT_rich Low_complexity Low_complexity 1 35 0 201 283 0 19 chr10 50455921 50455974 -89860791 + L2 LINE L2 3216 3267 -5 2179 98 3 31 chr10 50456400 50456717 -89860048 - AluY SINE Alu -3 308 1 462 194 83 0 chr10 50456803 50456911 -89859854 - MER5C DNA MER1_type -201 123 7 267 286 17 25 chr10 50456945 50457064 -89859701 - LTR33 LTR ERVL -8 513 396 22 0 0 0 chr10 50457613 50457635 -89859130 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr10 50458360 50458398 -89858367 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr10 50460342 50460363 -89856402 + AT_rich Low_complexity Low_complexity 1 21 0 364 293 167 35 chr10 50460410 50460584 -89856181 - LTR16A1 LTR ERVL 0 457 261 227 276 181 0 chr10 50460641 50460746 -89856019 - LTR16A1 LTR ERVL -333 124 1 372 158 183 0 chr10 50461070 50461152 -89855613 - L1MA9 LINE L1 -1 6311 6215 234 363 63 26 chr10 50461198 50461388 -89855377 + L2 LINE L2 2584 2780 -534 412 308 203 6 chr10 50461403 50461585 -89855180 + L2 LINE L2 2108 2325 -989 448 333 161 15 chr10 50461600 50462278 -89854487 + L2 LINE L2 2460 3298 -15 21 0 0 0 chr10 50463479 50463500 -89853265 + AT_rich Low_complexity Low_complexity 1 21 0 4712 196 11 7 chr10 50464485 50465353 -89851412 - ERVL-B3 LTR ERVL -1183 4581 3710 3861 196 55 20 chr10 50465353 50466139 -89850626 - ERVL-B3 LTR ERVL -3275 2489 1677 248 132 0 0 chr10 50466141 50466179 -89850586 + L1MA8 LINE L1 6209 6246 -45 21 57 0 19 chr10 50466180 50466194 -89850571 + AT_rich Low_complexity Low_complexity 1 14 -38 6846 87 9 15 chr10 50466194 50467934 -89848831 - L1PA7 LINE L1 -4 6150 4397 21 57 0 19 chr10 50467934 50467972 -89848793 + AT_rich Low_complexity Low_complexity 14 52 0 369 145 0 14 chr10 50467987 50468056 -89848709 - L1PA7 LINE L1 -3218 2928 2861 * 23154 133 13 80 chr10 50468051 50472749 -89844016 - L1P LINE L1 -1753 4393 12 234 139 0 0 chr10 50472759 50472802 -89843963 + L1MA8 LINE L1 6245 6287 -4 4961 209 17 11 chr10 50472827 50473819 -89842946 - ERVL-B3 LTR ERVL -4087 1677 680 2692 226 46 92 chr10 50473862 50474302 -89842463 - ERVL-B3 LTR ERVL -5000 764 333 240 167 0 0 chr10 50474302 50474344 -89842421 - 5S rRNA rRNA -79 42 1 2692 226 46 92 chr10 50474344 50474662 -89842103 - ERVL-B3 LTR ERVL -5431 333 2 1506 221 132 52 chr10 50474690 50475129 -89841636 - MLT2B3 LTR ERVL -80 474 1 717 334 135 6 chr10 50475264 50475684 -89841081 + L2 LINE L2 2624 3098 -215 577 37 12 12 chr10 50475751 50475832 -89840933 + (TCTA)n Simple_repeat Simple_repeat 3 83 0 21 0 0 0 chr10 50478562 50478583 -89838182 + AT_rich Low_complexity Low_complexity 1 21 0 1760 192 74 95 chr10 50478883 50479367 -89837398 + MER61E LTR ERV1 92 565 -4 390 235 84 42 chr10 50479375 50479494 -89837271 - MER58A DNA MER1_type 0 136 13 315 325 43 0 chr10 50479516 50479704 -89837061 + L1M4 LINE L1 2777 2972 -3174 486 265 64 74 chr10 50479707 50480220 -89836545 + L1MC5 LINE L1 6721 7228 -733 870 252 58 33 chr10 50480343 50480827 -89835938 + L1MC5 LINE L1 7262 7757 -204 505 149 53 11 chr10 50480883 50480977 -89835788 + MER4A LTR ERV1 1 98 -566 1750 128 9 25 chr10 50480977 50481328 -89835437 + MER4A LTR ERV1 261 664 0 270 232 0 62 chr10 50481330 50481442 -89835323 + L1MC5 LINE L1 7810 7914 -47 590 306 108 43 chr10 50481455 50481976 -89834789 + L1M4 LINE L1 2952 3508 -2638 604 75 0 0 chr10 50482111 50482191 -89834574 - MADE1 DNA Mariner 0 80 1 267 284 193 24 chr10 50482248 50482502 -89834263 + L1M4 LINE L1 3752 4048 -2098 817 227 68 33 chr10 50482557 50482934 -89833831 + LTR16C LTR ERVL 67 487 -4 25 95 0 0 chr10 50482937 50483011 -89833754 + AT_rich Low_complexity Low_complexity 1 74 0 2152 143 27 14 chr10 50483602 50483972 -89832793 - THE1C LTR MaLR 0 375 1 355 267 26 43 chr10 50484106 50484222 -89832543 + MER5A DNA MER1_type 72 185 -4 21 57 0 0 chr10 50484273 50484308 -89832457 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 50484342 50484363 -89832402 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr10 50484400 50484431 -89832334 + AT_rich Low_complexity Low_complexity 1 31 0 667 227 43 37 chr10 50485173 50485293 -89831472 - MER58A DNA MER1_type -2218 202 79 1860 153 40 35 chr10 50485293 50485666 -89831099 + THE1C LTR MaLR 1 375 0 667 227 43 37 chr10 50485666 50485708 -89831057 - MER58A DNA MER1_type -2341 79 39 1915 145 0 0 chr10 50487316 50487605 -89829160 - AluSx SINE Alu -1 311 23 183 353 0 15 chr10 50487656 50487724 -89829041 - MER5A DNA MER1_type -28 161 95 291 291 13 25 chr10 50488243 50488401 -89828364 + L1MC5 LINE L1 7366 7521 -440 696 233 81 36 chr10 50488446 50488755 -89828010 + L1MC5 LINE L1 7606 7928 -33 221 356 10 29 chr10 50488769 50488873 -89827892 - MER5B DNA MER1_type -69 109 8 27 0 0 0 chr10 50488889 50488916 -89827849 + AT_rich Low_complexity Low_complexity 1 27 0 385 325 54 18 chr10 50489394 50489560 -89827205 - MER5B DNA MER1_type 0 178 7 903 317 49 55 chr10 50489905 50490616 -89826149 - L2 LINE L2 -2 3311 2595 1430 193 55 11 chr10 50490702 50490977 -89825788 + AluJo SINE Alu 1 287 -25 213 136 91 0 chr10 50490986 50491052 -89825713 + (TA)n Simple_repeat Simple_repeat 2 73 0 202 338 15 0 chr10 50491350 50491418 -89825347 - L2 LINE L2 -575 2739 2671 206 265 0 20 chr10 50491458 50491507 -89825258 + L2 LINE L2 2696 2743 -571 381 356 158 4 chr10 50491509 50491762 -89825003 - L2 LINE L2 -701 2613 2322 834 193 27 5 chr10 50491779 50491966 -89824799 - L1MA8 LINE L1 -3 6288 6098 349 379 155 0 chr10 50491967 50492276 -89824489 - L2 LINE L2 -999 2315 1959 326 360 107 4 chr10 50492470 50492723 -89824042 - MLT1J2 LTR MaLR -171 279 1 25 75 0 0 chr10 50492725 50492778 -89823987 + AT_rich Low_complexity Low_complexity 1 53 0 245 206 0 15 chr10 50493091 50493159 -89823606 + (TA)n Simple_repeat Simple_repeat 2 68 0 2307 81 3 7 chr10 50493391 50493699 -89823066 + AluSq SINE Alu 1 307 -6 1314 263 106 22 chr10 50494137 50494771 -89821994 - L1ME3A LINE L1 -222 5948 5262 2111 100 7 3 chr10 50494874 50495197 -89821568 + AluSq SINE Alu 1 324 0 284 263 83 52 chr10 50496996 50497415 -89819350 - L1ME3A LINE L1 -1606 4540 4109 455 290 106 70 chr10 50498340 50498681 -89818084 - MLT1H1 LTR MaLR 0 555 203 187 68 0 68 chr10 50498746 50498790 -89817975 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 273 128 0 0 chr10 50498873 50498920 -89817845 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1028 248 0 0 chr10 50498949 50499171 -89817594 - MIR SINE MIR -38 224 3 46 0 0 0 chr10 50499629 50499675 -89817090 + AT_rich Low_complexity Low_complexity 1 46 0 32 0 0 0 chr10 50501047 50501079 -89815686 + AT_rich Low_complexity Low_complexity 1 32 0 255 389 28 0 chr10 50501810 50501918 -89814847 - L2 LINE L2 -1 3271 3161 219 297 186 0 chr10 50502466 50502584 -89814181 - L2 LINE L2 0 3272 3133 306 240 41 82 chr10 50503291 50503487 -89813278 + L1M4 LINE L1 4963 5150 -996 715 318 60 14 chr10 50503641 50503993 -89812772 - L1ME3A LINE L1 -35 6135 5768 250 77 0 39 chr10 50505073 50505125 -89811640 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 7433 25 0 0 chr10 50505125 50506724 -89810041 - L1PA3 LINE L1 -24 6131 4533 17315 29 1 0 chr10 50506724 50508807 -89807958 + L1P LINE L1 2404 4487 -1659 1927 115 49 0 chr10 50508886 50509173 -89807592 + AluSx SINE Alu 1 301 -11 4922 166 100 11 chr10 50509488 50510424 -89806341 + LTR28 LTR ERV1 1 1020 0 6173 165 12 4 chr10 50511575 50513640 -89803125 + L1PB1 LINE L1 4069 6151 0 1072 146 0 0 chr10 50513646 50513804 -89802961 + AluSg/x SINE Alu 137 294 -18 195 69 0 0 chr10 50513814 50513843 -89802922 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1926 121 28 3 chr10 50513854 50514143 -89802622 + AluSq SINE Alu 1 296 -17 186 403 23 8 chr10 50514553 50514682 -89802083 + L2 LINE L2 3183 3313 0 1257 98 37 5 chr10 50515708 50515922 -89800843 - L1MA4 LINE L1 -9 6291 6071 4984 169 43 19 chr10 50515951 50517362 -89799403 - L1PA16 LINE L1 -1 6165 4747 1416 171 7 0 chr10 50517908 50518177 -89798588 - L1MA4 LINE L1 -8 6292 6022 292 226 0 0 chr10 50518178 50518240 -89798525 + L1MA4A LINE L1 5639 5700 -605 * 668 162 0 1 chr10 50518217 50518334 -89798431 - L1P5 LINE L1 -356 5795 5680 351 318 86 40 chr10 50518824 50519022 -89797743 + L1MEd LINE L1 562 768 -5351 29 70 0 0 chr10 50519083 50519140 -89797625 + AT_rich Low_complexity Low_complexity 1 57 0 432 252 102 15 chr10 50519364 50519571 -89797194 + L1ME LINE L1 5587 5808 -358 22 35 0 0 chr10 50519582 50519611 -89797154 + AT_rich Low_complexity Low_complexity 1 29 0 513 253 199 34 chr10 50520108 50520516 -89796249 - L1M4 LINE L1 -2167 3979 3505 525 320 45 22 chr10 50520535 50520894 -89795871 + L1ME LINE L1 5450 5816 -346 25 0 0 0 chr10 50520940 50520965 -89795800 + AT_rich Low_complexity Low_complexity 1 25 0 267 31 0 0 chr10 50521441 50521473 -89795292 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 51 0 0 chr10 50521597 50521636 -89795129 + AT_rich Low_complexity Low_complexity 1 39 0 2421 151 16 38 chr10 50522584 50523027 -89793738 - Tigger2a DNA MER2_type -1 433 1 27 0 0 0 chr10 50523658 50523685 -89793080 + AT_rich Low_complexity Low_complexity 1 27 0 2186 154 22 2 chr10 50523893 50524301 -89792464 - L1MA4A LINE L1 -7 6296 5881 1173 176 10 0 chr10 50524301 50524506 -89792259 + L1MA4A LINE L1 5674 5880 -423 209 307 53 79 chr10 50524518 50524632 -89792133 - MIR SINE MIR -99 163 53 186 256 139 12 chr10 50526413 50526499 -89790266 + L3 LINE CR1 989 1085 -492 322 323 71 0 chr10 50526505 50526604 -89790161 + L2 LINE L2 3163 3268 -4 341 353 124 24 chr10 50526637 50527008 -89789757 + L3 LINE CR1 1113 1520 -57 206 311 210 17 chr10 50527085 50527204 -89789561 - MER5A DNA MER1_type -1 188 47 1333 166 4 20 chr10 50527544 50527797 -89788968 + L1MC1 LINE L1 5980 6228 -105 299 191 73 0 chr10 50527901 50527969 -89788796 + L1MC1 LINE L1 6256 6328 -5 438 275 96 5 chr10 50528163 50528381 -89788384 + L1M4 LINE L1 4471 4708 -1438 1819 104 64 54 chr10 50528659 50528957 -89787808 - AluSq SINE Alu -12 301 1 2141 114 0 10 chr10 50529475 50529774 -89786991 + AluSg SINE Alu 6 301 -9 354 316 7 22 chr10 50530618 50530754 -89786011 + HAL1 LINE L1 1483 1616 -891 683 294 31 22 chr10 50530906 50531229 -89785536 + L1M4 LINE L1 3699 4024 -2122 33462 27 0 0 chr10 50531283 50536048 -89780717 - L1PA3 LINE L1 0 6155 1390 33 43 0 0 chr10 50536178 50536225 -89780540 + GC_rich Low_complexity Low_complexity 1 47 0 1562 166 18 69 chr10 50536353 50536744 -89780021 + L1MA7 LINE L1 5912 6282 -9 906 116 55 20 chr10 50537063 50537209 -89779556 - AluSg1 SINE Alu -158 151 1 225 186 157 59 chr10 50537311 50537413 -89779352 - L2 LINE L2 -1 3312 3201 2319 71 30 0 chr10 50537655 50537950 -89778815 + AluY SINE Alu 1 304 -7 410 284 77 18 chr10 50538046 50538215 -89778550 - MER110 LTR ERV1 -7 484 306 537 294 35 60 chr10 50538549 50538831 -89777934 - MER110-int LTR ERV1 -20 4627 4353 359 248 7 88 chr10 50539184 50539321 -89777444 - HAL1 LINE L1 -121 2386 2261 295 322 71 50 chr10 50539376 50540056 -89776709 - HAL1 LINE L1 -836 1671 978 220 390 39 32 chr10 50540961 50541115 -89775650 + MIR3 SINE MIR 23 177 -31 5446 168 19 14 chr10 50541234 50542927 -89773838 + L1MA3 LINE L1 4127 5830 -475 15875 182 44 4 chr10 50542936 50547180 -89769585 + L1PB2 LINE L1 1 4415 -2447 2071 191 48 62 chr10 50547180 50547741 -89769024 - MLT2B3 LTR ERVL 0 554 2 207 214 0 0 chr10 50547768 50547810 -89768955 + (TA)n Simple_repeat Simple_repeat 2 43 0 647 135 0 0 chr10 50547812 50547916 -89768849 - HERVL-B3 LTR ERVL -226 5428 5325 191 295 0 64 chr10 50547916 50547994 -89768771 - MIR3 SINE MIR -124 84 12 28839 112 22 5 chr10 50547994 50549984 -89766781 - HERVL LTR ERVL -408 5246 3293 2174 122 3 0 chr10 50549984 50550280 -89766485 + AluSx SINE Alu 1 297 -15 28839 112 22 5 chr10 50550280 50552377 -89764388 - HERVL LTR ERVL -2361 3293 1086 5708 160 9 26 chr10 50552377 50553906 -89762859 + L1PB2 LINE L1 4999 6487 -380 423 0 0 0 chr10 50553906 50553953 -89762812 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 5708 160 9 26 chr10 50553953 50554322 -89762443 + L1PB2 LINE L1 6487 6860 -7 3033 117 0 35 chr10 50554718 50555230 -89761535 + L1MA3 LINE L1 5812 6305 0 291 318 57 57 chr10 50555954 50556130 -89760635 - MIR SINE MIR -86 176 1 262 230 9 106 chr10 50556554 50556667 -89760098 - L1ME LINE L1 -5939 131 30 2217 86 0 0 chr10 50556990 50557308 -89759457 - AluSc SINE Alu 0 318 1 4737 142 15 10 chr10 50557758 50558555 -89758210 - L1PA16 LINE L1 0 6166 5366 24 32 0 0 chr10 50558646 50558677 -89758088 + AT_rich Low_complexity Low_complexity 1 31 0 543 329 98 40 chr10 50560302 50560779 -89755986 + MLT1K LTR MaLR 79 583 -5 183 129 0 0 chr10 50560966 50560997 -89755768 + (TG)n Simple_repeat Simple_repeat 2 32 0 234 193 0 0 chr10 50561103 50561160 -89755605 + (TA)n Simple_repeat Simple_repeat 1 57 0 1892 164 0 20 chr10 50562258 50562563 -89754202 - AluSx SINE Alu -13 299 1 1488 231 5 9 chr10 50563378 50563808 -89752957 - MER89 LTR ERV1 -68 491 1 216 185 123 12 chr10 50563933 50564014 -89752751 - MIR SINE MIR -41 221 132 21 36 0 0 chr10 50564171 50564199 -89752566 + AT_rich Low_complexity Low_complexity 1 28 0 185 191 0 21 chr10 50564918 50564965 -89751800 + CT-rich Low_complexity Low_complexity 3 48 0 275 351 0 11 chr10 50564966 50565060 -89751705 - L2 LINE L2 -31 3282 3190 233 361 0 19 chr10 50565102 50565210 -89751555 + MIR SINE MIR 59 164 -98 23 0 0 0 chr10 50565218 50565241 -89751524 + AT_rich Low_complexity Low_complexity 1 23 0 273 294 49 10 chr10 50565455 50565557 -89751208 + MER5C DNA MER1_type 206 311 -13 846 218 32 50 chr10 50565810 50566030 -89750735 + MER20 DNA MER1_type 4 219 0 657 181 118 0 chr10 50566320 50566464 -89750301 + LTR47A LTR ERVL 261 421 -31 297 174 41 102 chr10 50566605 50566703 -89750062 - L2 LINE L2 -1 3312 3221 4902 183 16 29 chr10 50567395 50568227 -89748538 - L1PB4 LINE L1 -2 6154 5313 2135 119 0 0 chr10 50568227 50568520 -89748245 - AluSx SINE Alu -19 293 1 4902 183 16 29 chr10 50568520 50569457 -89747308 - L1PB4 LINE L1 -843 5313 4397 971 246 17 10 chr10 50569437 50569725 -89747040 - L1PB4 LINE L1 -3086 3060 2771 * 25 0 0 0 chr10 50569796 50569821 -89746944 + AT_rich Low_complexity Low_complexity 1 25 0 252 196 20 49 chr10 50569996 50570098 -89746667 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 693 104 264 7 chr10 50670329 50670366 -89646399 - L1MC3 LINE L1 -702 7083 7057 201 39 0 0 chr10 50670366 50670392 -89646373 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 693 104 264 7 chr10 50670392 50670498 -89646267 - L1MC3 LINE L1 -728 7057 6903 250 314 0 47 chr10 50670638 50670724 -89646041 + L2 LINE L2 3191 3272 0 451 314 74 17 chr10 50670738 50670913 -89645852 - MIR SINE MIR -31 231 47 461 268 83 48 chr10 50671373 50671585 -89645180 + MIR SINE MIR 16 233 -29 282 194 119 0 chr10 50672364 50672431 -89644334 + HsTC2 DNA Tc2 1 75 -1823 821 222 171 21 chr10 50672542 50672876 -89643889 + HsTC2 DNA Tc2 1515 1898 0 4031 201 50 14 chr10 50673390 50674846 -89641919 + L1M3 LINE L1 4198 5736 -432 403 82 0 0 chr10 50674859 50674920 -89641845 - MSTB1 LTR MaLR -14 418 358 2700 174 19 11 chr10 50674920 50675732 -89641033 + L1P4 LINE L1 4761 5578 -588 4731 124 37 9 chr10 50675732 50676535 -89640230 + L1MA3 LINE L1 5476 6304 -1 436 296 141 7 chr10 50677296 50677438 -89639327 + MIR SINE MIR 7 167 -95 192 40 0 0 chr10 50677447 50677472 -89639293 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2015 63 0 114 chr10 50677475 50677791 -89638974 - AluSg SINE Alu -30 280 1 290 280 0 85 chr10 50677832 50677950 -89638815 + L2 LINE L2 3159 3266 -47 449 248 166 13 chr10 50678063 50678220 -89638545 - MER5A DNA MER1_type 0 189 9 289 296 10 41 chr10 50678239 50678337 -89638428 + MER5A DNA MER1_type 94 188 -1 225 304 122 14 chr10 50678884 50679032 -89637733 + L3 LINE CR1 613 776 -801 220 298 74 25 chr10 50679120 50679241 -89637524 - L2 LINE L2 -8 3305 3179 322 243 0 29 chr10 50679521 50679591 -89637174 - MER69 DNA AcHobo -2458 68 1 345 250 71 29 chr10 50679623 50679763 -89637002 + L1MC4 LINE L1 5704 5849 -1959 273 231 13 0 chr10 50679741 50679819 -89636946 + L1MC4 LINE L1 6625 6703 -1339 * 230 290 10 0 chr10 50679743 50679843 -89636922 - L1MC4 LINE L1 -1350 6692 6592 * 226 194 75 0 chr10 50679847 50679914 -89636851 + L1MCa LINE L1 2008 2079 -4347 195 42 0 0 chr10 50680749 50680773 -89635992 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 233 270 170 0 chr10 50680923 50681023 -89635742 + L2 LINE L2 3119 3235 -78 17890 36 1 0 chr10 50682023 50684956 -89631809 - L1PA4 LINE L1 -1 6154 3218 295 289 75 15 chr10 50686084 50686200 -89630565 + MIR SINE MIR 36 155 -63 595 212 84 34 chr10 50686231 50686410 -89630355 - MER5A DNA MER1_type 0 189 2 234 346 100 8 chr10 50686426 50686556 -89630209 - MER5A DNA MER1_type -1 188 47 571 242 20 0 chr10 50686596 50686749 -89630016 - L1MD3 LINE L1 -19 7976 7821 1666 236 71 19 chr10 50686784 50687262 -89629503 + MLT1D LTR MaLR 3 505 0 26 50 0 0 chr10 50688004 50688044 -89628721 + AT_rich Low_complexity Low_complexity 1 40 0 275 312 13 45 chr10 50688560 50688717 -89628048 - LTR67 LTR ERVL -4 553 402 205 222 0 0 chr10 50689260 50689305 -89627460 - MIR3 SINE MIR -5 203 159 233 232 226 37 chr10 50689469 50689633 -89627132 - MLT1L LTR MaLR -226 389 195 210 310 56 12 chr10 50689756 50689852 -89626913 - MIR SINE MIR -54 154 55 324 0 0 0 chr10 50690713 50690749 -89626016 + (TAA)n Simple_repeat Simple_repeat 2 37 0 827 87 0 8 chr10 50691831 50691958 -89624807 + L1PA13 LINE L1 6034 6159 -4 184 289 19 0 chr10 50692000 50692052 -89624713 + L2 LINE L2 3244 3296 -17 23 33 0 0 chr10 50692956 50692986 -89623779 + AT_rich Low_complexity Low_complexity 1 30 0 2576 106 11 0 chr10 50694149 50694509 -89622256 - THE1B LTR MaLR 0 364 1 10679 97 13 60 chr10 50694509 50696167 -89620598 - THE1B-int LTR MaLR 0 1580 1 2388 146 6 0 chr10 50696167 50696529 -89620236 - THE1B LTR MaLR 0 364 1 358 364 21 5 chr10 50696529 50696716 -89620049 - MIR SINE MIR -25 237 48 316 252 138 32 chr10 50696738 50696861 -89619904 - L2 LINE L2 -1 3312 3177 831 283 35 24 chr10 50696890 50697180 -89619585 - L2 LINE L2 -498 2816 2524 235 238 48 0 chr10 50698211 50698274 -89618491 - MER81 DNA DNA -5 109 44 220 271 21 83 chr10 50698745 50698841 -89617924 + MIR3 SINE MIR 87 176 -32 262 373 31 19 chr10 50699439 50699600 -89617165 + L2 LINE L2 2887 3049 -223 492 281 192 24 chr10 50699808 50700146 -89616619 - LTR16C LTR ERVL 0 491 97 1667 152 4 19 chr10 50700230 50700499 -89616266 + AluSx SINE Alu 34 298 -14 21 71 0 0 chr10 50700606 50700648 -89616117 + AT_rich Low_complexity Low_complexity 1 42 0 26 30 0 0 chr10 50700711 50700744 -89616021 + AT_rich Low_complexity Low_complexity 1 33 0 808 268 75 70 chr10 50700934 50701292 -89615473 + L2 LINE L2 2954 3313 0 365 319 95 23 chr10 50702068 50702510 -89614255 - L1MC/D LINE L1 -2004 5804 5297 231 114 0 0 chr10 50702595 50702630 -89614135 + (CAG)n Simple_repeat Simple_repeat 2 36 0 513 273 101 38 chr10 50703855 50704064 -89612701 - MIR SINE MIR -31 231 10 236 318 0 0 chr10 50705407 50705470 -89611295 - MIR3 SINE MIR -21 187 125 300 334 153 39 chr10 50705600 50706013 -89610752 + L2 LINE L2 2813 3272 0 5034 116 0 2 chr10 50706343 50706700 -89610065 - L1PA15 LINE L1 -3 6162 5806 377 20 0 20 chr10 50706700 50706751 -89610014 + (TG)n Simple_repeat Simple_repeat 2 51 0 5034 116 0 2 chr10 50706751 50707612 -89609153 - L1PA15 LINE L1 -359 5806 4918 1683 156 75 28 chr10 50707656 50708014 -89608751 - THE1C LTR MaLR 0 375 1 362 277 150 4 chr10 50708476 50708729 -89608036 - L1ME4a LINE L1 -287 5834 5545 201 208 64 144 chr10 50708744 50708869 -89607896 + L2 LINE L2 3197 3311 -2 200 111 28 0 chr10 50709142 50709178 -89607587 + (TG)n Simple_repeat Simple_repeat 1 37 0 293 261 85 8 chr10 50709656 50709786 -89606979 - L1ME4a LINE L1 -4 6117 5978 905 143 0 45 chr10 50710094 50710248 -89606517 + AluJb SINE Alu 161 307 -5 331 247 39 39 chr10 50710251 50710405 -89606360 - L1ME4a LINE L1 -335 5786 5633 347 219 0 14 chr10 50710435 50710508 -89606257 + MLT1A2 LTR MaLR 150 221 -153 300 324 42 34 chr10 50710514 50710838 -89605927 - L1ME4a LINE L1 -536 5585 5260 1795 184 51 17 chr10 50711626 50711979 -89604786 + MLT1A1 LTR MaLR 1 365 0 1233 342 112 32 chr10 50712063 50713218 -89603547 - L2 LINE L2 0 3272 2024 870 235 15 0 chr10 50714004 50714208 -89602557 + L1PB4 LINE L1 5949 6155 -1 298 317 0 20 chr10 50714438 50714539 -89602226 - MER94 DNA DNA -34 100 2 715 306 57 0 chr10 50714929 50715174 -89601591 + MIR SINE MIR 2 260 -2 1793 163 17 0 chr10 50715679 50715967 -89600798 - AluJb SINE Alu -19 293 1 21 0 0 0 chr10 50716660 50716681 -89600084 + AT_rich Low_complexity Low_complexity 1 21 0 23 82 0 31 chr10 50716838 50716936 -89599829 + AT_rich Low_complexity Low_complexity 1 95 0 560 311 71 13 chr10 50717035 50717260 -89599505 + MIR SINE MIR 11 248 -14 1687 195 3 3 chr10 50718150 50718457 -89598308 - AluJb SINE Alu -5 307 1 306 119 63 8 chr10 50718677 50718803 -89597962 + (TA)n Simple_repeat Simple_repeat 1 133 0 432 366 66 29 chr10 50719293 50719883 -89596882 + L2 LINE L2 1795 2406 -908 511 292 33 45 chr10 50720138 50720381 -89596384 + MLT1L LTR MaLR 201 440 -175 22 80 0 0 chr10 50720628 50720678 -89596087 + AT_rich Low_complexity Low_complexity 1 50 0 274 253 38 0 chr10 50721555 50721634 -89595131 - MER117 DNA MER1_type -86 111 30 209 343 56 56 chr10 50721695 50721873 -89594892 + L2 LINE L2 2829 3006 -266 266 303 261 4 chr10 50723468 50723706 -89593059 + L2 LINE L2 2329 2627 -687 2485 224 43 20 chr10 50723824 50724468 -89592297 - L1ME1 LINE L1 -28 6138 5480 1846 142 23 0 chr10 50724469 50724771 -89591994 - AluSp SINE Alu -4 309 1 6516 176 62 46 chr10 50724788 50725736 -89591029 - ERVL LTR ERVL -171 5593 4616 2404 73 0 13 chr10 50725736 50726036 -89590729 - AluY SINE Alu -15 296 1 6516 176 62 46 chr10 50726036 50726449 -89590316 - ERVL LTR ERVL -1148 4616 4211 571 314 179 20 chr10 50727246 50727638 -89589127 + L2 LINE L2 2243 2696 -618 23 0 0 0 chr10 50728189 50728212 -89588553 + AT_rich Low_complexity Low_complexity 1 23 0 1773 231 130 5 chr10 50728219 50728787 -89587978 + L1MC4 LINE L1 7280 7918 -124 444 275 0 0 chr10 50728787 50728925 -89587840 + (CATATA)n Simple_repeat Simple_repeat 3 140 0 631 181 16 0 chr10 50728934 50729061 -89587704 + L1MC4 LINE L1 7914 8042 0 439 322 41 12 chr10 50729727 50729898 -89586867 + MIR SINE MIR 8 183 -79 2257 85 0 0 chr10 50730099 50730380 -89586385 - AluY SINE Alu -30 281 1 846 167 0 0 chr10 50730402 50730534 -89586231 - FLAM_C SINE Alu -11 132 1 25 0 0 0 chr10 50730641 50730666 -89586099 + AT_rich Low_complexity Low_complexity 1 25 0 186 224 0 52 chr10 50730884 50730942 -89585823 + MER5C DNA MER1_type 126 180 -144 22 0 0 0 chr10 50731276 50731298 -89585467 + AT_rich Low_complexity Low_complexity 1 22 0 426 244 17 42 chr10 50731679 50731798 -89584967 - L1MC1 LINE L1 0 6333 6218 956 219 50 100 chr10 50731912 50732333 -89584432 + MLT1C LTR MaLR 65 464 -3 465 256 146 30 chr10 50732500 50732699 -89584066 + MLT1J2 LTR MaLR 65 286 -164 557 290 170 49 chr10 50733157 50733597 -89583168 + MLT1K LTR MaLR 2 552 -36 222 264 299 0 chr10 50735340 50735427 -89581338 + L2 LINE L2 3192 3304 -9 4083 95 4 153 chr10 50735553 50736365 -89580400 + LTR12 LTR ERV1 1 691 -23 257 281 83 16 chr10 50736735 50736856 -89579909 + MER112 DNA MER1_type 1 129 -131 311 299 90 7 chr10 50736971 50737115 -89579650 - L1ME LINE L1 -519 5643 5488 586 246 89 57 chr10 50737146 50737496 -89579269 - L1ME4a LINE L1 -214 5907 5547 2757 22 0 0 chr10 50737795 50738106 -89578659 - AluY SINE Alu 0 311 1 26 30 0 0 chr10 50738399 50738432 -89578333 + AT_rich Low_complexity Low_complexity 1 33 0 425 282 9 9 chr10 50738487 50738597 -89578168 - MER5B DNA MER1_type -49 129 20 755 224 28 51 chr10 50738619 50738833 -89577932 - MER3 DNA MER1_type 0 209 1 199 255 20 0 chr10 50738904 50738955 -89577810 - L2 LINE L2 -6 3266 3215 25 75 0 0 chr10 50739033 50739086 -89577679 + AT_rich Low_complexity Low_complexity 1 53 0 1286 220 45 24 chr10 50739611 50740012 -89576753 + MLT2B1 LTR ERVL 21 478 -42 294 29 0 0 chr10 50740012 50740047 -89576718 + (CA)n Simple_repeat Simple_repeat 2 36 0 1286 220 45 24 chr10 50740047 50740091 -89576674 + MLT2B1 LTR ERVL 478 520 0 257 279 202 0 chr10 50740790 50740894 -89575871 + Charlie8 DNA MER1_type 370 494 -1923 226 314 0 0 chr10 50740905 50740975 -89575790 + Charlie8 DNA MER1_type 2348 2417 0 273 263 6 26 chr10 50741196 50741352 -89575413 + CT-rich Low_complexity Low_complexity 3 155 0 713 271 97 40 chr10 50741915 50742295 -89574470 - MLT1I LTR MaLR -4 405 4 204 233 0 0 chr10 50742653 50742696 -89574069 + (CTA)n Simple_repeat Simple_repeat 1 43 0 4648 171 18 18 chr10 50743163 50744476 -89572289 - L1MB1 LINE L1 -1 6167 4848 1977 152 0 9 chr10 50745959 50746274 -89570491 + AluSx SINE Alu 1 312 0 470 232 65 122 chr10 50747749 50747995 -89568770 + MIR SINE MIR 31 262 0 1674 74 4 26 chr10 50748530 50748759 -89568006 + AluY SINE Alu 68 291 -20 210 321 75 58 chr10 50749535 50749828 -89566937 + L2 LINE L2 2596 2893 -421 2173 245 104 27 chr10 50750436 50751336 -89565429 - L1ME3A LINE L1 -20 6219 5244 1125 174 107 21 chr10 50751386 50751628 -89565137 - L1MC1 LINE L1 -6 6327 6065 579 308 51 34 chr10 50751621 50752034 -89564731 - L1ME3A LINE L1 -950 5265 4846 * 355 299 23 6 chr10 50752166 50752343 -89564422 - L1ME3A LINE L1 -1962 4253 4074 809 197 7 7 chr10 50752386 50752577 -89564188 - FRAM SINE Alu 0 185 1 28 86 0 0 chr10 50752578 50752648 -89564117 + AT_rich Low_complexity Low_complexity 1 70 0 1106 270 77 28 chr10 50752658 50753515 -89563250 - L1MEc LINE L1 -3321 2894 2044 318 305 33 38 chr10 50753670 50753883 -89562882 - L1MEc LINE L1 -4581 1815 1604 334 281 26 0 chr10 50754455 50754608 -89562157 + MLT1A1 LTR MaLR 153 309 -56 1772 94 7 40 chr10 50755380 50755678 -89561087 - AluSc SINE Alu -21 288 1 665 298 55 55 chr10 50756286 50756632 -89560133 + L2 LINE L2 2425 2770 -544 374 359 23 8 chr10 50756806 50756934 -89559831 + MER5B DNA MER1_type 49 178 0 21 57 0 0 chr10 50758802 50758837 -89557928 + AT_rich Low_complexity Low_complexity 1 35 0 1780 99 0 16 chr10 50759105 50759376 -89557389 + AluSx SINE Alu 48 314 0 226 165 26 17 chr10 50759844 50759959 -89556806 + (TA)n Simple_repeat Simple_repeat 1 116 0 23 54 0 0 chr10 50759969 50760006 -89556759 + AT_rich Low_complexity Low_complexity 1 37 0 310 218 51 0 chr10 50760006 50760162 -89556603 + (TA)n Simple_repeat Simple_repeat 1 164 0 69 21 0 11 chr10 50760162 50760179 -89556586 + AT_rich Low_complexity Low_complexity 1 17 -76 1987 128 24 0 chr10 50760179 50760467 -89556298 - AluSq SINE Alu -18 295 1 69 21 0 11 chr10 50760467 50760543 -89556222 + AT_rich Low_complexity Low_complexity 17 93 0 1300 210 14 24 chr10 50760543 50760834 -89555931 - AluJo SINE Alu -24 288 1 259 266 0 0 chr10 50760881 50760945 -89555820 + MIR SINE MIR 168 231 -31 1389 179 4 4 chr10 50761768 50762014 -89554751 + MSTA LTR MaLR 1 246 -182 77 48 0 21 chr10 50762131 50762276 -89554489 + AT_rich Low_complexity Low_complexity 1 142 0 280 182 36 18 chr10 50762287 50762397 -89554368 + (TTATA)n Simple_repeat Simple_repeat 5 116 0 452 86 11 86 chr10 50762403 50762578 -89554187 + (TTTA)n Simple_repeat Simple_repeat 2 163 0 28 0 0 0 chr10 50762583 50762611 -89554154 + AT_rich Low_complexity Low_complexity 1 28 0 317 182 28 0 chr10 50762612 50762755 -89554010 + (TA)n Simple_repeat Simple_repeat 1 147 0 23 0 0 0 chr10 50762760 50762783 -89553982 + AT_rich Low_complexity Low_complexity 1 23 0 5046 105 25 2 chr10 50762783 50763493 -89553272 + L1PA8A LINE L1 4571 5263 -868 186 71 0 0 chr10 50763493 50763521 -89553244 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5046 105 25 2 chr10 50763521 50764194 -89552571 + L1PA8A LINE L1 5263 5989 -142 24 91 0 0 chr10 50764485 50764551 -89552214 + AT_rich Low_complexity Low_complexity 1 66 0 431 257 0 18 chr10 50764653 50764766 -89551999 + MIR SINE MIR 79 189 -73 1984 123 23 7 chr10 50764989 50765290 -89551475 - AluSx SINE Alu -4 308 3 522 207 50 39 chr10 50765553 50765758 -89551007 + MLT1H LTR MaLR 335 548 -1 256 271 65 37 chr10 50765994 50766101 -89550664 + MER117 DNA MER1_type 1 110 -87 496 349 39 13 chr10 50766803 50767035 -89549730 - MIR SINE MIR -16 246 9 284 271 31 21 chr10 50767099 50767195 -89549570 + MIR SINE MIR 46 142 -120 293 326 38 22 chr10 50767204 50767388 -89549377 - LTR33 LTR ERVL -9 512 326 510 319 72 12 chr10 50767414 50767665 -89549100 - LTR33 LTR ERVL -247 274 9 233 248 114 19 chr10 50767680 50767785 -89548980 + MIR SINE MIR 148 262 0 284 208 0 0 chr10 50767792 50767845 -89548920 - L2 LINE L2 0 3313 3261 941 116 0 0 chr10 50768014 50768143 -89548622 - FLAM_C SINE Alu -14 129 1 201 319 43 14 chr10 50769113 50769182 -89547583 - MIR SINE MIR -85 177 107 687 202 24 18 chr10 50770046 50770214 -89546551 - FRAM SINE Alu -13 163 1 23 0 0 0 chr10 50770224 50770247 -89546518 + AT_rich Low_complexity Low_complexity 1 23 0 801 271 76 43 chr10 50770361 50771180 -89545585 - L1MCc LINE L1 -3379 3562 2770 944 279 98 41 chr10 50771275 50771736 -89545029 - L1MCc LINE L1 -4083 2859 2426 219 36 0 0 chr10 50771736 50771764 -89545001 + (TG)n Simple_repeat Simple_repeat 2 29 0 2735 89 6 0 chr10 50771764 50772123 -89544642 - THE1B LTR MaLR -3 361 1 944 279 98 41 chr10 50772123 50772726 -89544039 - L1MCc LINE L1 -4515 2427 1281 249 288 121 30 chr10 50773113 50773245 -89543520 - L1MCc LINE L1 -5924 1007 864 2346 89 3 0 chr10 50773295 50773597 -89543168 - AluSp SINE Alu -10 303 1 1930 137 11 108 chr10 50773921 50774300 -89542465 - Tigger3(Golem) DNA MER2_type -7 3022 1 533 233 36 90 chr10 50776806 50777186 -89539579 + L1MC4a LINE L1 7043 7293 -515 402 293 45 54 chr10 50777488 50777710 -89539055 + L1MC4 LINE L1 7823 8042 0 21 0 0 0 chr10 50777875 50777896 -89538869 + AT_rich Low_complexity Low_complexity 1 21 0 489 320 20 9 chr10 50778135 50778335 -89538430 - MIR SINE MIR -29 233 33 1277 221 45 24 chr10 50779070 50779114 -89537651 - MLT2B1 LTR ERVL 0 520 478 276 30 0 0 chr10 50779114 50779147 -89537618 + (TG)n Simple_repeat Simple_repeat 2 34 0 1277 221 45 24 chr10 50779147 50779547 -89537218 - MLT2B1 LTR ERVL -42 478 22 25 75 0 0 chr10 50780082 50780135 -89536630 + AT_rich Low_complexity Low_complexity 1 53 0 199 255 20 0 chr10 50780213 50780264 -89536501 + L2 LINE L2 3215 3266 -6 755 224 28 51 chr10 50780335 50780549 -89536216 + MER3 DNA MER1_type 1 209 0 425 282 9 9 chr10 50780571 50780681 -89536084 + MER5B DNA MER1_type 20 129 -49 26 30 0 0 chr10 50780736 50780769 -89535996 + AT_rich Low_complexity Low_complexity 1 33 0 2757 22 0 0 chr10 50781062 50781373 -89535392 + AluY SINE Alu 1 311 0 462 238 106 65 chr10 50781668 50782009 -89534756 + L1ME4a LINE L1 5553 5907 -214 311 299 90 7 chr10 50782041 50782185 -89534580 + L1ME LINE L1 5488 5643 -519 257 281 83 16 chr10 50782300 50782421 -89534344 - MER112 DNA MER1_type -131 129 1 4083 95 4 153 chr10 50782793 50783605 -89533160 - LTR12 LTR ERV1 -23 691 1 222 264 299 0 chr10 50783731 50783818 -89532947 - L2 LINE L2 -9 3304 3192 255 51 102 0 chr10 50785377 50785436 -89531329 + (TA)n Simple_repeat Simple_repeat 1 65 0 458 111 47 23 chr10 50785436 50785607 -89531158 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 24 0 0 0 chr10 50785610 50785634 -89531131 + AT_rich Low_complexity Low_complexity 1 24 0 475 56 106 0 chr10 50785634 50785794 -89530971 + (TA)n Simple_repeat Simple_repeat 1 177 0 27 29 0 0 chr10 50785805 50785839 -89530926 + AT_rich Low_complexity Low_complexity 1 34 0 2173 125 3 3 chr10 50785909 50786221 -89530544 - AluSx SINE Alu 0 312 1 944 191 67 24 chr10 50786764 50786973 -89529792 + MER20 DNA MER1_type 2 219 0 198 0 0 0 chr10 50787067 50787089 -89529676 + (TG)n Simple_repeat Simple_repeat 1 22 0 261 248 77 0 chr10 50787468 50787585 -89529180 + L1MA10 LINE L1 6207 6332 -2 427 303 172 16 chr10 50787790 50788173 -89528592 - L1MC4a LINE L1 -1920 5888 5446 1935 166 0 0 chr10 50788331 50788662 -89528103 + L1MB3 LINE L1 5598 5928 -255 1746 76 42 30 chr10 50788662 50788924 -89527841 + MLT2A2 LTR ERVL 1 265 -188 1282 94 33 6 chr10 50788921 50789101 -89527664 + MLT2A1 LTR ERVL 215 399 -45 * 225 157 20 0 chr10 50789139 50789190 -89527575 + L1MC4 LINE L1 6652 6703 -1339 263 120 60 0 chr10 50789195 50789245 -89527520 + MLT2A1 LTR ERVL 390 442 -2 1383 145 28 8 chr10 50789246 50789501 -89527264 + L1MB3 LINE L1 5923 6182 -1 234 154 0 0 chr10 50789572 50789611 -89527154 - L1 LINE L1 -1372 4774 4736 24 85 0 0 chr10 50789834 50789893 -89526872 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr10 50790103 50790124 -89526641 + AT_rich Low_complexity Low_complexity 1 21 0 294 29 0 0 chr10 50790833 50790868 -89525897 + (TC)n Simple_repeat Simple_repeat 1 35 0 319 280 64 48 chr10 50791013 50791138 -89525627 + L2 LINE L2 3144 3270 -2 198 0 0 0 chr10 50791579 50791601 -89525164 + (CA)n Simple_repeat Simple_repeat 2 23 0 25 0 0 0 chr10 50792088 50792113 -89524652 + AT_rich Low_complexity Low_complexity 1 25 0 242 264 14 14 chr10 50793191 50793263 -89523502 + L1MC4a LINE L1 6063 6134 -1674 25 0 0 0 chr10 50793283 50793308 -89523457 + AT_rich Low_complexity Low_complexity 1 25 0 1756 156 0 33 chr10 50793313 50793614 -89523151 + AluSx SINE Alu 1 291 -21 268 301 14 0 chr10 50793904 50793977 -89522788 - MIR SINE MIR -113 149 76 2697 205 35 25 chr10 50794315 50794906 -89521859 - MLT1E3 LTR MaLR -2 622 26 26 64 0 0 chr10 50795029 50795076 -89521689 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr10 50795250 50795278 -89521487 + AT_rich Low_complexity Low_complexity 1 28 0 2096 143 0 0 chr10 50795511 50795804 -89520961 + AluSx SINE Alu 1 293 -19 475 296 32 17 chr10 50796226 50796409 -89520356 - MIR SINE MIR -4 204 10 729 200 24 24 chr10 50796713 50796878 -89519887 - MER97b DNA MER1_type? -820 233 69 593 289 77 9 chr10 50797256 50797482 -89519283 + MIR SINE MIR 14 261 -1 411 278 139 0 chr10 50797873 50798017 -89518748 + MIR3 SINE MIR 34 197 -11 267 31 0 0 chr10 50799381 50799413 -89517352 + (CA)n Simple_repeat Simple_repeat 2 33 0 308 93 0 19 chr10 50800061 50800115 -89516650 + (CCG)n Simple_repeat Simple_repeat 2 54 0 262 234 234 72 chr10 50800478 50800589 -89516176 - L2 LINE L2 -1 3271 3143 281 279 57 16 chr10 50801476 50801598 -89515167 - MER103 DNA DNA -38 128 2 555 181 0 0 chr10 50801830 50801924 -89514841 - MSTD LTR MaLR -301 95 2 246 176 0 0 chr10 50802014 50802065 -89514700 + (TATG)n Simple_repeat Simple_repeat 4 54 0 347 305 84 0 chr10 50804558 50804653 -89512112 + MER81 DNA DNA 1 103 -11 195 274 245 19 chr10 50804934 50805040 -89511725 + MIR SINE MIR 46 175 -87 21 36 0 0 chr10 50806081 50806109 -89510656 + AT_rich Low_complexity Low_complexity 1 28 0 1974 93 14 7 chr10 50806687 50807000 -89509765 + AluSc SINE Alu 1 315 0 189 107 0 0 chr10 50807589 50807617 -89509148 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 206 179 51 0 chr10 50807994 50808033 -89508732 + G-rich Low_complexity Low_complexity 4 44 0 1879 147 0 35 chr10 50812979 50813298 -89503467 - AluSx SINE Alu -4 308 1 2286 64 4 4 chr10 50813349 50813684 -89503081 - AluY SINE Alu 0 335 1 225 0 0 0 chr10 50814448 50814473 -89502292 + (TG)n Simple_repeat Simple_repeat 2 26 0 459 141 14 0 chr10 50815913 50815984 -89500781 - MLT1D LTR MaLR -142 363 292 668 181 101 113 chr10 50816477 50816543 -89500222 - MIR SINE MIR -10 252 187 228 35 0 0 chr10 50816543 50816572 -89500193 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1483 163 21 43 chr10 50816572 50816854 -89499911 - AluJo SINE Alu -32 280 5 668 181 101 113 chr10 50816854 50817034 -89499731 - MIR SINE MIR -73 189 8 614 254 17 17 chr10 50817183 50817360 -89499405 + MER5B DNA MER1_type 1 177 -1 712 184 34 39 chr10 50817624 50817803 -89498962 - MER5B DNA MER1_type 0 178 1 347 289 34 60 chr10 50820901 50821050 -89495715 - MIR SINE MIR -7 255 111 369 289 81 29 chr10 50821319 50821492 -89495273 + L3 LINE CR1 1394 1575 -2 23 33 0 0 chr10 50821624 50821654 -89495111 + AT_rich Low_complexity Low_complexity 1 30 0 393 338 7 7 chr10 50821910 50822055 -89494710 - MIR SINE MIR -32 230 86 23 0 0 0 chr10 50823184 50823207 -89493558 + AT_rich Low_complexity Low_complexity 1 23 0 1691 217 35 72 chr10 50824157 50824669 -89492096 - MLT1D LTR MaLR 0 505 13 487 294 126 14 chr10 50824870 50825084 -89491681 - MIR SINE MIR 0 262 25 268 279 0 0 chr10 50826019 50826080 -89490685 + MER90 LTR ERV1 1 61 -553 345 47 0 0 chr10 50827493 50827536 -89489229 + (ATG)n Simple_repeat Simple_repeat 2 44 0 563 269 11 49 chr10 50827565 50827768 -89488997 - MIR SINE MIR -59 203 8 1742 196 0 0 chr10 50827974 50828270 -89488495 - AluJb SINE Alu -16 296 1 289 337 59 30 chr10 50828842 50829011 -89487754 + L2 LINE L2 3118 3291 -22 235 333 65 39 chr10 50829919 50830072 -89486693 - MIR SINE MIR -58 204 48 204 271 247 41 chr10 50830233 50830403 -89486362 + MIR SINE MIR 49 253 -9 942 231 24 8 chr10 50831413 50831668 -89485097 - L1MB8 LINE L1 -1 6177 5919 428 305 37 24 chr10 50831944 50832108 -89484657 - MIR SINE MIR -12 250 85 914 216 11 0 chr10 50833331 50833516 -89483249 + MER5A DNA MER1_type 3 189 0 435 137 41 20 chr10 50833864 50834010 -89482755 + (TA)n Simple_repeat Simple_repeat 2 150 0 306 0 0 0 chr10 50834010 50834044 -89482721 + (CA)n Simple_repeat Simple_repeat 2 35 0 200 289 244 0 chr10 50834118 50834274 -89482491 + L2 LINE L2 3102 3295 -18 25 31 0 0 chr10 50834409 50834441 -89482324 + AT_rich Low_complexity Low_complexity 1 32 0 325 306 15 30 chr10 50835099 50835233 -89481532 - MIR SINE MIR -111 151 20 222 353 101 8 chr10 50835305 50835424 -89481341 - MIR SINE MIR -59 149 20 339 291 149 7 chr10 50836632 50836759 -89480006 + MIR SINE MIR 3 149 -113 804 261 37 14 chr10 50836759 50836977 -89479788 + MIR SINE MIR 2 224 -38 741 178 161 6 chr10 50837013 50837187 -89479578 + MER20 DNA MER1_type 1 201 -18 1654 185 7 16 chr10 50837426 50837734 -89479031 - AluSq SINE Alu -8 305 1 586 270 89 36 chr10 50838198 50838539 -89478226 + MIR SINE MIR 1 233 -29 356 247 12 0 chr10 50839294 50839375 -89477390 + LTR16A1 LTR ERVL 372 453 -4 261 75 0 0 chr10 50839595 50839635 -89477130 + (CA)n Simple_repeat Simple_repeat 2 41 0 317 299 34 7 chr10 50839950 50840097 -89476668 - HAL1 LINE L1 -1046 1461 1311 1840 185 7 0 chr10 50840101 50840404 -89476361 - AluJo SINE Alu -7 305 1 1246 197 52 63 chr10 50841316 50841682 -89475083 + MLT1A2 LTR MaLR 29 374 0 687 302 92 23 chr10 50841779 50842170 -89474595 + HAL1 LINE L1 1 418 -2089 1567 182 102 5 chr10 50842171 50842545 -89474220 + MER63B DNA MER1_type 1 410 -26 2557 286 83 81 chr10 50842578 50843042 -89473723 + HAL1 LINE L1 417 878 -1629 186 43 0 0 chr10 50843042 50843065 -89473700 + (CA)n Simple_repeat Simple_repeat 2 24 0 2557 286 83 81 chr10 50843065 50844686 -89472079 + HAL1 LINE L1 878 2507 0 1885 141 3 30 chr10 50844842 50845004 -89471761 - AluSx SINE Alu -16 296 144 2004 131 7 7 chr10 50845004 50845348 -89471417 - AluSq SINE Alu 0 313 1 1885 141 3 30 chr10 50845348 50845489 -89471276 - AluSx SINE Alu -168 144 1 31 44 0 0 chr10 50846000 50846045 -89470720 + AT_rich Low_complexity Low_complexity 1 45 0 512 281 23 41 chr10 50846457 50846628 -89470137 + MIR SINE MIR 88 255 -7 742 288 144 35 chr10 50847133 50847698 -89469067 - L2 LINE L2 0 3313 2690 5682 223 61 43 chr10 50847698 50847879 -89468886 + L1ME1 LINE L1 3063 3239 -3095 1541 153 113 4 chr10 50847879 50848154 -89468611 + AluJb SINE Alu 3 307 -5 5682 223 61 43 chr10 50848154 50851021 -89465744 + L1ME1 LINE L1 3239 6311 -23 27 29 0 0 chr10 50851563 50851597 -89465168 + AT_rich Low_complexity Low_complexity 1 34 0 1047 93 12 19 chr10 50851597 50851758 -89465007 - L1MA1 LINE L1 0 6302 6143 24 0 0 0 chr10 50852766 50852790 -89463975 + AT_rich Low_complexity Low_complexity 1 24 0 330 319 0 11 chr10 50853531 50853625 -89463140 - MIR SINE MIR -85 123 31 192 158 0 0 chr10 50854053 50854091 -89462674 + A-rich Low_complexity Low_complexity 1 38 0 378 0 0 0 chr10 50854269 50854311 -89462454 + (TG)n Simple_repeat Simple_repeat 2 43 0 195 212 341 0 chr10 50854520 50854605 -89462160 + L3b LINE CR1 1354 1467 -116 225 0 0 0 chr10 50854649 50854674 -89462091 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2143 108 4 0 chr10 50855359 50855638 -89461127 + AluSg SINE Alu 1 280 -30 264 100 0 0 chr10 50855720 50855760 -89461005 + (GA)n Simple_repeat Simple_repeat 1 40 0 2127 109 7 3 chr10 50855882 50856175 -89460590 + AluSc SINE Alu 1 294 -15 201 94 0 0 chr10 50857647 50857679 -89459086 + (TG)n Simple_repeat Simple_repeat 2 33 0 2324 117 0 0 chr10 50858294 50858603 -89458162 - AluSq SINE Alu -4 309 1 1271 132 0 0 chr10 50859465 50859647 -89457118 + AluSq SINE Alu 129 310 -3 352 340 30 44 chr10 50859684 50859887 -89456878 + MIR3 SINE MIR 3 202 -6 198 266 165 37 chr10 50861052 50861161 -89455604 - MIR SINE MIR -40 222 100 2209 112 135 23 chr10 50861192 50861577 -89455188 - MSTA LTR MaLR 0 428 1 2979 131 11 13 chr10 50862448 50862915 -89453850 + MLT1C LTR MaLR 2 467 0 298 303 84 14 chr10 50863411 50863553 -89453212 - MIR SINE MIR -6 256 105 631 213 142 0 chr10 50863647 50863802 -89452963 - MER45A DNA AcHobo 0 178 2 26 30 0 0 chr10 50865545 50865578 -89451187 + AT_rich Low_complexity Low_complexity 1 33 0 245 313 104 37 chr10 50866248 50866382 -89450383 + MIR SINE MIR 49 191 -71 519 274 40 70 chr10 50866422 50866623 -89450142 + MIR SINE MIR 19 213 -49 21 57 0 0 chr10 50866909 50866944 -89449821 + AT_rich Low_complexity Low_complexity 1 35 0 2325 149 70 2 chr10 50867173 50867570 -89449195 + MSTB LTR MaLR 1 424 -2 486 306 52 12 chr10 50868178 50868351 -89448414 - MIR SINE MIR -13 249 70 386 272 124 72 chr10 50868811 50869076 -89447689 - HAL1 LINE L1 -2206 301 23 1784 139 0 0 chr10 50869100 50869352 -89447413 + AluSx SINE Alu 2 253 -59 180 0 0 0 chr10 50869376 50869396 -89447369 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 29 28 0 0 chr10 50869455 50869491 -89447274 + AT_rich Low_complexity Low_complexity 1 36 0 720 112 0 0 chr10 50869491 50869598 -89447167 - L1MA1 LINE L1 -9 6293 6187 278 276 65 57 chr10 50869983 50870106 -89446659 - MIR SINE MIR -131 131 8 379 35 35 0 chr10 50871273 50871330 -89445435 + (TA)n Simple_repeat Simple_repeat 2 60 0 273 206 29 29 chr10 50871502 50871570 -89445195 - L2 LINE L2 -2 3311 3244 526 293 73 16 chr10 50871710 50871901 -89444864 + MIR SINE MIR 1 202 -60 259 362 69 0 chr10 50872162 50872278 -89444487 + L2 LINE L2 3132 3255 -17 250 244 38 56 chr10 50872339 50872499 -89444266 - L1ME4a LINE L1 -11 6110 5954 243 0 0 0 chr10 50872500 50872527 -89444238 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 251 367 47 13 chr10 50872807 50872957 -89443808 + L2 LINE L2 3159 3313 0 197 261 0 0 chr10 50873438 50873484 -89443281 - MIR SINE MIR -6 256 211 1437 159 20 71 chr10 50873791 50874122 -89442643 + AluJo SINE Alu 1 316 0 2177 119 3 10 chr10 50874127 50874430 -89442335 + AluSx SINE Alu 1 301 -11 3803 122 8 3 chr10 50874816 50875413 -89441352 - L1MA3 LINE L1 -10 6295 5696 728 137 0 0 chr10 50875418 50875535 -89441230 + L1MA3 LINE L1 6179 6295 -10 5560 130 18 43 chr10 50875664 50876859 -89439906 - L1M1 LINE L1 -605 7119 5896 360 0 0 0 chr10 50876859 50876899 -89439866 + (TG)n Simple_repeat Simple_repeat 1 40 0 5560 130 18 43 chr10 50876899 50876933 -89439832 - L1M1 LINE L1 -1828 5896 5863 2123 138 0 3 chr10 50876933 50877244 -89439521 - AluSg SINE Alu 0 310 1 5560 130 18 43 chr10 50877244 50877643 -89439122 - L1M1 LINE L1 -1861 5863 5535 4226 143 17 6 chr10 50877633 50878347 -89438418 - L1M1 LINE L1 -6125 1440 719 * 1836 166 59 6 chr10 50879375 50879713 -89437052 + MLT1A1 LTR MaLR 10 365 0 531 260 20 34 chr10 50879714 50879918 -89436847 - LTR16A LTR ERVL -223 227 27 189 323 16 0 chr10 50880018 50880080 -89436685 + L2 LINE L2 2998 3060 -212 298 259 52 69 chr10 50880298 50880414 -89436351 + L2 LINE L2 3200 3313 0 610 290 68 0 chr10 50880555 50880731 -89436034 - MIR SINE MIR -10 252 65 307 241 101 89 chr10 50881037 50881195 -89435570 - L1M2 LINE L1 -5927 922 763 1124 29 0 7 chr10 50883797 50883936 -89432829 - AluY SINE Alu -4 307 170 1994 135 45 18 chr10 50884139 50884473 -89432292 - MER2 DNA MER2_type 0 344 2 517 269 104 35 chr10 50885556 50885757 -89431008 - MIR SINE MIR -43 219 5 21 0 0 0 chr10 50887784 50887805 -89428960 + AT_rich Low_complexity Low_complexity 1 21 0 2187 121 0 13 chr10 50887861 50888175 -89428590 + AluSx SINE Alu 1 310 -2 25 65 0 0 chr10 50891859 50891905 -89424860 + AT_rich Low_complexity Low_complexity 1 46 0 414 0 0 0 chr10 50892628 50892674 -89424091 + (CAA)n Simple_repeat Simple_repeat 2 47 0 462 230 159 39 chr10 50893287 50893544 -89423221 - L1MC4a LINE L1 -1907 5901 5614 2000 116 18 0 chr10 50893644 50893965 -89422800 + AluSp SINE Alu 1 326 0 26 0 0 0 chr10 50894725 50894751 -89422014 + AT_rich Low_complexity Low_complexity 1 26 0 365 294 0 0 chr10 50895803 50895905 -89420860 + MIR SINE MIR 161 262 0 384 204 148 93 chr10 50896306 50896399 -89420366 - MER5A DNA MER1_type -1 188 81 2215 101 0 26 chr10 50896399 50896707 -89420058 - AluSg SINE Alu -10 300 1 384 204 148 93 chr10 50896707 50896775 -89419990 - MER5A DNA MER1_type -108 81 18 323 294 183 0 chr10 50897004 50897130 -89419635 + MIR SINE MIR 4 152 -110 262 244 83 117 chr10 50897290 50897470 -89419295 - MIR SINE MIR 0 262 89 303 303 8 76 chr10 50897596 50897728 -89419037 - MER5A DNA MER1_type 0 189 67 1576 236 36 8 chr10 50897783 50898172 -89418593 - MLT1C LTR MaLR 0 467 68 21 0 0 0 chr10 50899078 50899099 -89417666 + AT_rich Low_complexity Low_complexity 1 21 0 422 299 7 7 chr10 50899702 50899839 -89416926 + L3 LINE CR1 639 775 -802 1504 260 100 59 chr10 50899841 50900592 -89416173 - MER20B DNA MER1_type -1 782 1 540 176 16 150 chr10 50900688 50900881 -89415884 - MER20 DNA MER1_type -50 169 3 2101 130 74 9 chr10 50901272 50901610 -89415155 - THE1B LTR MaLR -2 362 3 322 296 102 34 chr10 50901618 50901794 -89414971 + L3 LINE CR1 1296 1483 -94 233 355 48 30 chr10 50901803 50901969 -89414796 - L3 LINE CR1 -2 1575 1407 192 77 0 0 chr10 50902060 50902086 -89414679 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 700 366 77 19 chr10 50902087 50902552 -89414213 - L2 LINE L2 -14 3299 2808 395 228 73 16 chr10 50902612 50902735 -89414030 + MIR SINE MIR 96 225 -37 2108 115 0 7 chr10 50902864 50903152 -89413613 - AluSc SINE Alu -23 286 1 389 186 13 4 chr10 50904090 50904198 -89412567 + L1MA5 LINE L1 6182 6276 -15 2193 127 0 0 chr10 50905067 50905367 -89411398 + AluSq SINE Alu 1 300 -13 219 98 24 24 chr10 50905475 50905516 -89411249 - L2 LINE L2 -213 3059 3019 193 224 26 79 chr10 50905720 50905796 -89410969 - L3 LINE CR1 -843 734 663 427 258 17 90 chr10 50906028 50906132 -89410633 - MIR SINE MIR -18 244 157 2110 118 17 0 chr10 50906132 50906429 -89410336 - AluSc SINE Alu -7 302 1 427 258 17 90 chr10 50906429 50906502 -89410263 - MIR SINE MIR -105 157 80 215 366 97 8 chr10 50906761 50906895 -89409870 + L2 LINE L2 3121 3266 -6 1501 157 10 82 chr10 50907252 50907579 -89409186 - AluJb SINE Alu 0 310 6 192 283 0 17 chr10 50907581 50907641 -89409124 - MIR SINE MIR -44 218 160 513 222 48 43 chr10 50907661 50907868 -89408897 - L1MEc LINE L1 -4746 1650 1443 246 310 0 0 chr10 50907920 50907978 -89408787 - MIR SINE MIR -190 72 15 2760 184 14 18 chr10 50908722 50909608 -89407157 + L1M3 LINE L1 4753 5639 -544 524 235 0 60 chr10 50909625 50909774 -89406991 - FLAM_C SINE Alu -1 142 3 266 172 31 31 chr10 50909775 50909839 -89406926 + L1M3 LINE L1 5627 5681 -490 1727 128 110 7 chr10 50910571 50910852 -89405913 + AluSg SINE Alu 1 310 0 190 308 0 0 chr10 50911356 50911408 -89405357 - L2 LINE L2 -220 3052 3001 181 350 88 19 chr10 50911529 50911689 -89405076 + L2 LINE L2 2429 2599 -715 1967 99 0 31 chr10 50912023 50912315 -89404450 + AluSg1 SINE Alu 26 308 -1 880 103 0 0 chr10 50912842 50912958 -89403807 + AluSq/x SINE Alu 1 116 -197 333 68 0 0 chr10 50912958 50913002 -89403763 + (CATA)n Simple_repeat Simple_repeat 3 46 0 258 33 100 0 chr10 50914067 50914127 -89402638 + (TA)n Simple_repeat Simple_repeat 1 66 0 829 146 36 0 chr10 50914160 50914325 -89402440 + L1MA7 LINE L1 6116 6286 -5 258 364 73 0 chr10 50914325 50914435 -89402330 + MER5A DNA MER1_type 65 182 -7 402 301 129 16 chr10 50914743 50914936 -89401829 - MIR SINE MIR -1 261 47 223 260 0 115 chr10 50915731 50915827 -89400938 + MIR3 SINE MIR 121 205 -3 258 426 30 10 chr10 50916546 50916743 -89400022 - L2 LINE L2 -201 3071 2871 558 274 22 71 chr10 50916891 50917116 -89399649 - L1MD2 LINE L1 0 7995 6199 573 299 106 43 chr10 50917263 50917301 -89399464 - L2 LINE L2 -757 2557 2523 1702 29 0 10 chr10 50917301 50917506 -89399259 + L1PA3 LINE L1 5950 6152 -3 573 299 106 43 chr10 50917506 50917929 -89398836 - L2 LINE L2 -791 2523 2067 195 125 0 0 chr10 50968047 50968087 -89348678 + (GA)n Simple_repeat Simple_repeat 1 40 0 336 278 58 34 chr10 50968148 50968326 -89348439 + MIR SINE MIR 29 216 -46 1963 198 30 48 chr10 50968386 50968988 -89347777 - L1MA8 LINE L1 -4 6287 5697 27 0 0 0 chr10 50971563 50971590 -89345175 + AT_rich Low_complexity Low_complexity 1 27 0 1991 125 3 7 chr10 50971591 50971880 -89344885 - AluSx SINE Alu -24 288 1 411 89 0 0 chr10 50972115 50972171 -89344594 - MADE1 DNA Mariner 0 80 25 2940 156 21 8 chr10 50972331 50973157 -89343608 - L1M2 LINE L1 -522 5778 4939 266 286 22 55 chr10 50973270 50973361 -89343404 + MIR SINE MIR 28 115 -147 233 159 14 43 chr10 50973449 50973518 -89343247 + (TAA)n Simple_repeat Simple_repeat 1 67 0 21 36 0 0 chr10 50973936 50973964 -89342801 + AT_rich Low_complexity Low_complexity 1 28 0 1764 143 68 16 chr10 50974814 50974894 -89341871 - L1M1 LINE L1 -687 5613 5539 1697 85 18 75 chr10 50974894 50975176 -89341589 + AluY SINE Alu 36 301 -10 1764 143 68 16 chr10 50975176 50975392 -89341373 - L1M1 LINE L1 -761 5539 5335 216 0 0 0 chr10 50975392 50975416 -89341349 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1764 143 68 16 chr10 50975416 50975746 -89341019 - L1M1 LINE L1 -965 5335 4950 629 141 31 4 chr10 50975744 50975863 -89340902 + L1MA5 LINE L1 5622 5741 -430 * 2642 151 32 4 chr10 50975997 50976462 -89340303 + L1MA5 LINE L1 5823 6300 0 520 294 67 69 chr10 50977960 50978263 -89338502 + L2 LINE L2 2778 3080 -233 640 195 76 81 chr10 50978728 50978938 -89337827 - MER63A DNA MER1_type 0 210 2 21 0 0 0 chr10 50979069 50979090 -89337675 + AT_rich Low_complexity Low_complexity 1 21 0 183 80 0 0 chr10 50980155 50980180 -89336585 + (A)n Simple_repeat Simple_repeat 1 25 0 192 40 0 0 chr10 50980581 50980606 -89336159 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 350 207 54 9 chr10 50980644 50980755 -89336010 - L1ME4a LINE L1 -221 5900 5785 22 0 0 0 chr10 50980990 50981012 -89335753 + AT_rich Low_complexity Low_complexity 1 22 0 253 333 17 17 chr10 50981606 50981723 -89335042 - L2 LINE L2 -36 3277 3161 211 264 64 0 chr10 50983195 50983262 -89333503 + MIR SINE MIR 79 150 -58 977 152 86 43 chr10 50983277 50983487 -89333278 + MER20 DNA MER1_type 1 219 0 785 268 19 67 chr10 50984329 50984598 -89332167 - MIR SINE MIR 0 262 7 1533 179 84 57 chr10 50984598 50985001 -89331764 - MLT2D LTR ERVL 0 414 1 881 143 71 28 chr10 50984972 50984994 -89331771 - Ricksha DNA DNA -1672 374 345 1993 136 60 22 chr10 50984994 50985324 -89331441 - ERVL-D LTR ERVL 0 5764 5417 210 37 0 0 chr10 50985324 50985351 -89331414 + (CA)n Simple_repeat Simple_repeat 1 27 0 1993 136 60 22 chr10 50985351 50985388 -89331377 - ERVL-D LTR ERVL -347 5417 5383 25 75 0 0 chr10 50985739 50985792 -89330973 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr10 50986868 50986891 -89329874 + AT_rich Low_complexity Low_complexity 1 23 0 1311 140 4 4 chr10 50986909 50987137 -89329628 - L1MA5A LINE L1 -7 6290 6063 516 290 49 6 chr10 50987163 50987346 -89329419 - MIR SINE MIR 0 262 72 21 0 0 0 chr10 50987835 50987856 -89328909 + AT_rich Low_complexity Low_complexity 1 21 0 466 333 141 36 chr10 50988668 50989079 -89327686 + L3 LINE CR1 1054 1507 -70 673 274 56 35 chr10 50989283 50989714 -89327051 - L1ME LINE L1 -284 5837 5396 321 68 0 0 chr10 50989902 50989946 -89326819 + (TG)n Simple_repeat Simple_repeat 2 45 0 645 267 49 30 chr10 50990011 50990277 -89326488 - MARNA DNA Mariner -71 515 245 23 33 0 0 chr10 50991730 50991760 -89325005 + AT_rich Low_complexity Low_complexity 1 30 0 1343 215 11 4 chr10 50991761 50992035 -89324730 - AluJo SINE Alu -26 286 11 953 138 0 0 chr10 50992068 50992213 -89324552 + AluSp/q SINE Alu 160 304 -9 18936 46 1 6 chr10 50992425 50994774 -89321991 + L1P LINE L1 1 2338 -3808 21 0 0 0 chr10 50995656 50995677 -89321088 + AT_rich Low_complexity Low_complexity 1 21 0 767 289 149 42 chr10 50996004 50996864 -89319901 - L2 LINE L2 -1 3312 2348 1939 201 88 2 chr10 50997149 50997627 -89319138 + Charlie1b DNA MER1_type 1 519 -4 326 328 26 26 chr10 50998714 50998830 -89317935 + MIR SINE MIR 21 136 -126 195 326 22 22 chr10 50999227 50999316 -89317449 - L2 LINE L2 -79 3234 3146 297 0 0 0 chr10 50999460 50999493 -89317272 + (CA)n Simple_repeat Simple_repeat 2 34 0 720 217 58 54 chr10 50999500 50999776 -89316989 - L2 LINE L2 -174 3139 2863 236 283 0 0 chr10 50999818 50999871 -89316894 + FAM SINE Alu 48 100 -75 1165 299 27 51 chr10 51000332 51000844 -89315921 - L2 LINE L2 -422 2892 2393 394 304 116 49 chr10 51000902 51001248 -89315517 - MLT1J LTR MaLR 0 511 143 21 0 0 0 chr10 51001465 51001486 -89315279 + AT_rich Low_complexity Low_complexity 1 21 0 303 323 0 21 chr10 51002226 51002319 -89314446 - L1MC4 LINE L1 -1339 6703 6613 275 49 24 0 chr10 51003024 51003065 -89313700 + (TG)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr10 51003530 51003567 -89313198 + AT_rich Low_complexity Low_complexity 1 37 0 671 181 58 0 chr10 51003678 51003833 -89312932 + L1MA8 LINE L1 6128 6291 0 220 288 59 17 chr10 51003842 51003960 -89312805 + MIR SINE MIR 99 221 -41 453 276 0 0 chr10 51004150 51004248 -89312517 + MER63 DNA MER1_type 676 773 -287 213 154 0 0 chr10 51004927 51004966 -89311799 + (CA)n Simple_repeat Simple_repeat 2 40 0 665 201 118 0 chr10 51005316 51005460 -89311305 + MER5A DNA MER1_type 4 164 -25 192 216 0 0 chr10 51005548 51005585 -89311180 + L2 LINE L2 3272 3308 -5 290 261 167 29 chr10 51005784 51005922 -89310843 - MIR SINE MIR -56 206 50 247 256 128 35 chr10 51005997 51006083 -89310682 - L2 LINE L2 -4 3268 3175 * 327 178 0 41 chr10 51006076 51006149 -89310616 + MIR SINE MIR 121 190 -72 205 419 43 9 chr10 51006224 51006434 -89310331 - L2 LINE L2 -180 3092 2876 21 0 0 0 chr10 51007437 51007458 -89309307 + AT_rich Low_complexity Low_complexity 1 21 0 1748 161 10 7 chr10 51008195 51008487 -89308278 + AluJb SINE Alu 1 293 -19 489 352 34 13 chr10 51009583 51009819 -89306946 + MIR SINE MIR 11 251 -11 21 71 0 0 chr10 51010825 51010867 -89305898 + AT_rich Low_complexity Low_complexity 1 42 0 2917 6 0 0 chr10 51011063 51011379 -89305386 - AluYb8 SINE Alu -2 316 1 613 197 29 15 chr10 51011470 51011607 -89305158 - MIR SINE MIR -11 251 113 332 290 50 0 chr10 51013352 51013452 -89303313 - MIR SINE MIR -72 190 86 375 280 30 45 chr10 51013686 51013886 -89302879 - MER117 DNA MER1_type 0 197 1 342 288 98 0 chr10 51014999 51015152 -89301613 + MIR SINE MIR 92 259 -3 423 236 42 115 chr10 51015507 51015795 -89300970 - L1ME4a LINE L1 -253 5868 5602 234 250 13 26 chr10 51016010 51016086 -89300679 - HAL1b LINE L1 -1184 164 90 31 0 0 0 chr10 51016094 51016125 -89300640 + AT_rich Low_complexity Low_complexity 1 31 0 348 24 0 0 chr10 51016793 51016834 -89299931 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr10 51016886 51016915 -89299850 + AT_rich Low_complexity Low_complexity 1 29 0 239 108 0 0 chr10 51019448 51019485 -89297280 - L2 LINE L2 -1 3312 3276 21 71 0 0 chr10 51019555 51019597 -89297168 + AT_rich Low_complexity Low_complexity 1 42 0 399 349 64 23 chr10 51019618 51019836 -89296929 - MIR SINE MIR 0 262 36 275 351 54 38 chr10 51020522 51020707 -89296058 + MIR SINE MIR 5 192 -70 716 263 76 10 chr10 51021116 51021314 -89295451 + MIR SINE MIR 34 244 -18 194 211 53 0 chr10 51021281 51021319 -89295446 + L2 LINE L2 3257 3296 -17 * 677 226 108 9 chr10 51021416 51021628 -89295137 - MIR SINE MIR -13 249 17 298 257 114 19 chr10 51022141 51022246 -89294519 + MIR3 SINE MIR 87 201 -7 195 129 0 0 chr10 51022695 51022726 -89294039 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 259 366 20 94 chr10 51022761 51022963 -89293802 - L2 LINE L2 -97 3175 2989 370 274 35 99 chr10 51023082 51023283 -89293482 + MER5A DNA MER1_type 2 189 0 1552 83 0 9 chr10 51024075 51024291 -89292474 - L1PA7 LINE L1 0 6154 5941 1998 195 29 3 chr10 51024501 51024885 -89291880 - MSTD LTR MaLR 0 396 3 537 157 0 2 chr10 51025824 51026009 -89290756 + AluJo SINE Alu 77 293 -9 * 1788 183 43 18 chr10 51026005 51026403 -89290362 + Cheshire DNA MER1_type 2012 2419 -1 703 257 104 38 chr10 51026408 51026696 -89290069 - MLT1I LTR MaLR -65 344 38 4743 21 0 6 chr10 51026979 51027503 -89289262 - SVA Other Other -156 1230 710 288 255 29 0 chr10 51027687 51027789 -89288976 + CT-rich Low_complexity Low_complexity 3 107 0 263 272 25 25 chr10 51027796 51027877 -89288888 + C-rich Low_complexity Low_complexity 4 84 0 1696 219 99 45 chr10 51028005 51028520 -89288245 + MER21B LTR ERV1 321 863 0 285 162 15 15 chr10 51028637 51028705 -89288060 - MER116 DNA Mariner -12 68 1 405 312 113 21 chr10 51029268 51029758 -89287007 - L2 LINE L2 -255 3058 2520 1479 236 76 16 chr10 51029761 51030194 -89286571 + MLT1C LTR MaLR 1 459 -8 520 277 32 27 chr10 51030641 51030829 -89285936 - MLT1B LTR MaLR -201 189 1 286 333 108 0 chr10 51030982 51031084 -89285681 - FLAM_C SINE Alu -17 116 4 255 318 88 47 chr10 51031805 51031996 -89284769 - MLT1L LTR MaLR -211 404 197 545 123 297 77 chr10 51031996 51032072 -89284693 + MER5A DNA MER1_type 1 59 -130 1758 85 0 0 chr10 51032072 51032296 -89284469 + AluSg/x SINE Alu 83 306 -4 545 123 297 77 chr10 51032296 51032374 -89284391 + MER5A DNA MER1_type 59 189 0 255 318 88 47 chr10 51032374 51032456 -89284309 - MLT1L LTR MaLR -418 197 120 1726 214 88 10 chr10 51032774 51033280 -89283485 + MLT1F LTR MaLR 6 539 -3 24 0 0 0 chr10 51033922 51033946 -89282819 + AT_rich Low_complexity Low_complexity 1 24 0 218 205 0 0 chr10 51034056 51034095 -89282670 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2026 128 3 0 chr10 51034095 51034377 -89282388 - AluSx SINE Alu -27 285 3 22 0 0 0 chr10 51034723 51034745 -89282020 + AT_rich Low_complexity Low_complexity 1 22 0 3217 32 0 0 chr10 51034745 51035122 -89281643 - L1PA3 LINE L1 -3 6152 5776 235 253 49 38 chr10 51035122 51035260 -89281505 - MIR SINE MIR -66 142 10 319 376 73 11 chr10 51036283 51036461 -89280304 - MIR SINE MIR -72 190 2 28 0 0 0 chr10 51037393 51037421 -89279344 + AT_rich Low_complexity Low_complexity 1 28 0 546 270 199 14 chr10 51037506 51037717 -89279048 - MIR SINE MIR -11 251 2 409 349 41 10 chr10 51038566 51038761 -89278004 + MIR SINE MIR 61 261 -1 1022 238 303 17 chr10 51038905 51039490 -89277275 - LTR50 LTR ERVL -43 752 1 4891 151 6 25 chr10 51039535 51040515 -89276250 + L1PB4 LINE L1 5180 6142 -14 239 358 155 34 chr10 51040599 51040806 -89275959 - L2 LINE L2 -8 3264 3033 24 0 0 0 chr10 51040870 51040894 -89275871 + AT_rich Low_complexity Low_complexity 1 24 0 304 273 64 18 chr10 51040985 51041095 -89275670 - L2 LINE L2 -21 3292 3178 212 329 29 138 chr10 51041380 51041620 -89275145 + L2 LINE L2 3002 3215 -57 2149 117 3 3 chr10 51042136 51042445 -89274320 - AluSp SINE Alu -4 309 1 257 50 0 25 chr10 51043344 51043384 -89273381 + (TG)n Simple_repeat Simple_repeat 1 39 0 1009 211 82 45 chr10 51043923 51044254 -89272511 + MER2 DNA MER2_type 1 343 -1 189 309 0 0 chr10 51045907 51045949 -89270816 - MIR SINE MIR -156 106 65 2186 103 0 3 chr10 51046680 51046997 -89269768 + AluSg SINE Alu 5 310 0 293 377 33 0 chr10 51048362 51048484 -89268281 + L2 LINE L2 3187 3312 -1 390 278 0 0 chr10 51048592 51048682 -89268083 + MIR SINE MIR 134 223 -39 25 31 0 0 chr10 51051340 51051372 -89265393 + AT_rich Low_complexity Low_complexity 1 32 0 531 305 89 9 chr10 51051444 51051657 -89265108 + MIR SINE MIR 23 252 -10 2799 97 35 2 chr10 51051763 51052186 -89264579 + L1MA2 LINE L1 5868 6304 0 494 219 78 0 chr10 51052246 51052374 -89264391 - MER33 DNA MER1_type -186 138 1 403 261 12 109 chr10 51053196 51053361 -89263404 - MIR SINE MIR -10 252 104 424 319 34 26 chr10 51053651 51053862 -89262903 + MIR SINE MIR 11 261 -1 1402 174 85 25 chr10 51053962 51054243 -89262522 + AluJo SINE Alu 1 298 -14 5185 157 30 26 chr10 51054245 51054741 -89262024 - L1MA4 LINE L1 -11 6289 5796 2042 46 70 49 chr10 51054741 51055025 -89261740 + AluY SINE Alu 1 290 -21 5185 157 30 26 chr10 51055025 51055536 -89261229 - L1MA4 LINE L1 -504 5796 5278 729 117 0 0 chr10 51055536 51055639 -89261126 - AluSx SINE Alu -12 297 195 1027 104 0 0 chr10 51055639 51055774 -89260991 - AluSx SINE Alu -177 135 1 1021 212 18 0 chr10 51055794 51056020 -89260745 - L1MA4 LINE L1 -894 5252 5023 2026 143 0 7 chr10 51057408 51057708 -89259057 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr10 51057749 51057778 -89258987 + AT_rich Low_complexity Low_complexity 1 29 0 5276 133 15 51 chr10 51057779 51057803 -89258962 - L1MA8 LINE L1 -10 6281 6258 1815 203 12 3 chr10 51057803 51058148 -89258617 - MER7A DNA MER2_type 0 346 1 5276 133 15 51 chr10 51058148 51059122 -89257643 - L1MA8 LINE L1 -33 6258 5319 21 36 0 0 chr10 51059139 51059167 -89257598 + AT_rich Low_complexity Low_complexity 1 28 0 3514 218 29 6 chr10 51059191 51059981 -89256784 - L1P LINE L1 -817 5329 4522 4057 163 18 6 chr10 51059981 51060704 -89256061 - Tigger1 DNA MER2_type -699 1719 988 220 383 92 0 chr10 51061206 51061326 -89255439 - L2 LINE L2 -3 3269 3139 669 301 106 28 chr10 51061334 51061769 -89254996 + LTR33 LTR ERVL 1 469 -52 180 367 71 29 chr10 51061920 51062130 -89254635 - L2 LINE L2 -233 3039 2821 216 384 27 20 chr10 51062357 51062503 -89254262 + L2 LINE L2 3159 3305 -8 1944 135 31 0 chr10 51063029 51063318 -89253447 + AluSq SINE Alu 4 301 -12 1558 211 28 14 chr10 51063397 51063757 -89253008 + MLT1A1 LTR MaLR 1 365 0 1023 279 27 81 chr10 51063897 51064380 -89252385 + LTR16A1 LTR ERVL 1 457 0 302 345 154 16 chr10 51064555 51064874 -89251891 - L2 LINE L2 -376 2938 2576 186 43 0 0 chr10 51064937 51064960 -89251805 + (GA)n Simple_repeat Simple_repeat 2 24 0 372 354 79 0 chr10 51065454 51065618 -89251147 + MIR SINE MIR 29 205 -57 306 0 0 0 chr10 51066215 51066249 -89250516 + (TG)n Simple_repeat Simple_repeat 2 35 0 199 402 61 12 chr10 51066789 51066953 -89249812 + L2 LINE L2 2891 3062 -210 2006 131 10 0 chr10 51066975 51067280 -89249485 - AluSx SINE Alu 0 312 5 1929 104 14 14 chr10 51067380 51067660 -89249105 - AluSq SINE Alu -12 301 22 2315 80 0 10 chr10 51068057 51068357 -89248408 + AluSg1 SINE Alu 1 297 -12 22 0 0 0 chr10 51069344 51069366 -89247399 + AT_rich Low_complexity Low_complexity 1 22 0 22008 30 2 1 chr10 51071902 51075325 -89241440 + L1PA4 LINE L1 2728 6153 -2 192 97 0 0 chr10 51075605 51075636 -89241129 + (TG)n Simple_repeat Simple_repeat 1 31 0 601 268 88 69 chr10 51076293 51076338 -89240427 - MLT1I LTR MaLR -3 406 363 1314 186 28 24 chr10 51076338 51076628 -89240137 - AluJo SINE Alu -19 293 3 601 268 88 69 chr10 51076628 51076944 -89239821 - MLT1I LTR MaLR -46 363 38 563 297 74 18 chr10 51077670 51077899 -89238866 - L2 LINE L2 -160 3153 2912 249 281 0 0 chr10 51077937 51078001 -89238764 + L2 LINE L2 3209 3272 0 227 319 118 7 chr10 51078090 51078225 -89238540 - MIR SINE MIR -3 259 110 856 258 36 40 chr10 51078232 51078484 -89238281 + MIR SINE MIR 11 261 -1 209 286 65 26 chr10 51078516 51078593 -89238172 - L2 LINE L2 -201 3071 2992 378 140 11 21 chr10 51080338 51080431 -89236334 + (TA)n Simple_repeat Simple_repeat 2 93 0 207 246 0 0 chr10 51080676 51080733 -89236032 + GA-rich Low_complexity Low_complexity 3 59 0 402 290 14 16 chr10 51080733 51080878 -89235887 + MIR SINE MIR 19 162 -46 22 56 0 0 chr10 51080927 51080963 -89235802 + AT_rich Low_complexity Low_complexity 1 36 0 193 253 13 67 chr10 51081106 51081181 -89235584 - L2 LINE L2 -9 3304 3234 2214 102 0 16 chr10 51081275 51081589 -89235176 + AluSg SINE Alu 1 309 -1 1256 224 126 50 chr10 51081706 51082262 -89234503 + MLT1E2 LTR MaLR 1 654 0 21 36 0 0 chr10 51082999 51083027 -89233738 + AT_rich Low_complexity Low_complexity 1 28 0 2024 118 6 34 chr10 51083711 51084033 -89232732 - AluSq SINE Alu 0 313 1 1283 164 5 129 chr10 51084675 51085071 -89231694 - L1MA9 LINE L1 0 6312 5966 22 70 0 0 chr10 51085113 51085156 -89231609 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr10 51085535 51085560 -89231205 + AT_rich Low_complexity Low_complexity 1 25 0 1605 211 16 25 chr10 51086895 51087259 -89229506 - MLT1A1 LTR MaLR 0 365 5 22 0 0 0 chr10 51087494 51087516 -89229249 + AT_rich Low_complexity Low_complexity 1 22 0 1840 166 3 7 chr10 51087770 51088077 -89228688 + AluSx SINE Alu 2 307 -5 475 338 132 31 chr10 51088126 51088543 -89228222 + L3 LINE CR1 299 757 -820 368 353 50 29 chr10 51088563 51088804 -89227961 + L3 LINE CR1 1233 1478 -99 246 132 29 15 chr10 51088979 51089047 -89227718 + (TA)n Simple_repeat Simple_repeat 1 69 0 187 259 86 0 chr10 51089099 51089157 -89227608 + L2 LINE L2 3210 3272 0 378 352 76 68 chr10 51090741 51091136 -89225629 + L2 LINE L2 2875 3272 0 232 292 66 66 chr10 51091330 51091467 -89225298 + MIR SINE MIR 13 149 -113 1737 175 16 10 chr10 51091494 51091802 -89224963 + AluJb SINE Alu 1 310 -2 269 279 106 0 chr10 51091898 51092002 -89224763 + L1MC/D LINE L1 5681 5795 -2013 2017 154 23 26 chr10 51092404 51092749 -89224016 + MER2 DNA MER2_type 1 344 0 184 318 0 0 chr10 51095940 51095984 -89220781 + MIR SINE MIR 81 124 -138 825 152 146 0 chr10 51097776 51097941 -89218824 - MER5A DNA MER1_type 0 189 1 305 224 24 24 chr10 51097976 51098061 -89218704 + MIR SINE MIR 83 167 -95 2240 104 7 10 chr10 51098353 51098651 -89218114 - AluSg SINE Alu -13 297 1 2172 114 3 7 chr10 51100146 51100454 -89216311 + AluSq SINE Alu 1 307 -6 1156 120 12 0 chr10 51100457 51100624 -89216141 + AluSg/x SINE Alu 130 298 -14 32 26 0 0 chr10 51100743 51100782 -89215983 + AT_rich Low_complexity Low_complexity 1 39 0 673 303 66 12 chr10 51101579 51101820 -89214945 + MIR SINE MIR 7 260 -2 576 251 87 43 chr10 51102831 51103038 -89213727 - MIR SINE MIR -10 252 37 287 250 26 172 chr10 51103201 51103393 -89213372 - MIR3 SINE MIR -3 205 42 354 257 90 69 chr10 51104328 51104472 -89212293 - L2 LINE L2 -4 3268 3122 449 371 105 35 chr10 51104494 51105035 -89211730 + L3 LINE CR1 89 667 -910 417 299 29 7 chr10 51105035 51105172 -89211593 - LTR33 LTR ERVL 0 521 382 239 275 116 0 chr10 51105534 51105603 -89211162 + L3 LINE CR1 447 523 -1054 21 0 0 0 chr10 51105989 51106010 -89210755 + AT_rich Low_complexity Low_complexity 1 21 0 214 325 52 26 chr10 51107386 51107463 -89209302 - L2 LINE L2 -32 3240 3162 860 178 82 34 chr10 51108226 51108434 -89208331 + MER58A DNA MER1_type 7 224 0 337 282 39 0 chr10 51109432 51109535 -89207230 + L2 LINE L2 3205 3311 -2 23 33 0 0 chr10 51110231 51110261 -89206504 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr10 51110896 51110943 -89205822 + AT_rich Low_complexity Low_complexity 1 47 0 381 270 70 17 chr10 51111568 51111683 -89205082 - L2 LINE L2 -5 3308 3188 248 293 13 13 chr10 51112722 51112797 -89203968 - MIR SINE MIR -90 172 98 198 0 0 0 chr10 51114009 51114031 -89202734 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 324 348 116 17 chr10 51114494 51114727 -89202038 + MIR SINE MIR 7 262 0 21 82 0 0 chr10 51116975 51117024 -89199741 + AT_rich Low_complexity Low_complexity 1 49 0 184 220 180 0 chr10 51117178 51117228 -89199537 - L3 LINE CR1 -2 1575 1517 367 224 24 80 chr10 51117235 51117360 -89199405 - MLT1L LTR MaLR -4 611 494 236 177 16 48 chr10 51117742 51117804 -89198961 - MIR3 SINE MIR -40 168 109 29 28 0 0 chr10 51118820 51118856 -89197909 + AT_rich Low_complexity Low_complexity 1 36 0 256 211 35 0 chr10 51119214 51119271 -89197494 + L2 LINE L2 3250 3308 -5 698 301 149 39 chr10 51119281 51119792 -89196973 - MLT1K LTR MaLR -4 584 18 272 200 0 50 chr10 51120543 51120603 -89196162 + MIR SINE MIR 204 260 -2 186 240 0 0 chr10 51121001 51121051 -89195714 + (TA)n Simple_repeat Simple_repeat 1 50 0 384 285 29 47 chr10 51121205 51121311 -89195454 - MIR SINE MIR -12 250 147 2312 103 0 6 chr10 51121311 51121622 -89195143 - AluSq SINE Alu -4 309 1 384 285 29 47 chr10 51121622 51121687 -89195078 - MIR SINE MIR -115 147 82 210 191 0 0 chr10 51121852 51121894 -89194871 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr10 51122276 51122299 -89194466 + AT_rich Low_complexity Low_complexity 1 23 0 670 281 77 71 chr10 51123565 51123728 -89193037 - MER102b DNA MER1_type -1087 341 181 2529 49 0 7 chr10 51123728 51124032 -89192733 - AluY SINE Alu -9 302 1 670 281 77 71 chr10 51124032 51124192 -89192573 - MER102b DNA MER1_type -1247 181 16 1772 164 131 13 chr10 51124421 51124804 -89191961 - MSTA LTR MaLR 0 428 1 207 0 0 0 chr10 51125190 51125213 -89191552 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 563 299 72 62 chr10 51126556 51127057 -89189708 - MARNA DNA Mariner -18 568 63 793 150 48 37 chr10 51127151 51127338 -89189427 - MER53 DNA DNA 0 189 1 242 0 61 0 chr10 51127362 51127395 -89189370 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 297 345 51 59 chr10 51127613 51127781 -89188984 - L2 LINE L2 -238 3034 2866 832 228 16 5 chr10 51127781 51127965 -89188800 - MER5A DNA MER1_type 0 189 4 297 345 51 59 chr10 51127965 51128221 -89188544 - L2 LINE L2 -406 2866 2613 1376 225 62 0 chr10 51129389 51129762 -89187003 + L1PB2 LINE L1 4872 5267 -879 7196 87 35 17 chr10 51129801 51130840 -89185925 - MER11C LTR ERVK -14 1057 1 5920 102 17 5 chr10 51130840 51131718 -89185047 + L1PB2 LINE L1 5262 6150 -1 4733 51 2 5 chr10 51133530 51134114 -89182651 - L1PA7 LINE L1 -265 5889 5304 1847 52 39 0 chr10 51134114 51134347 -89182418 + L1PA7 LINE L1 5895 6136 -18 4733 51 2 5 chr10 51134347 51134376 -89182389 - L1PA7 LINE L1 -850 5304 5276 1619 188 0 41 chr10 51135075 51135395 -89181370 + AluJb SINE Alu 1 307 -5 672 320 65 17 chr10 51135396 51135690 -89181075 + MER102b DNA MER1_type 1 308 -33 227 394 69 11 chr10 51135774 51135962 -89180803 + MIR SINE MIR 54 252 -10 209 230 77 0 chr10 51136329 51136381 -89180384 + MIR SINE MIR 99 153 -62 361 297 150 18 chr10 51136391 51136664 -89180101 - MLT1J1 LTR MaLR -1 445 137 191 284 172 52 chr10 51137654 51137788 -89178977 - L2 LINE L2 -211 3061 2912 21286 55 6 0 chr10 51137811 51143240 -89173525 - L1PA5 LINE L1 0 6154 618 2045 116 39 0 chr10 51143222 51143533 -89173232 + L1PA5 LINE L1 298 620 -5526 * 520 278 71 24 chr10 51143705 51143874 -89172891 + MER5B DNA MER1_type 1 177 -1 253 306 111 89 chr10 51143990 51144395 -89172370 - L2 LINE L2 -833 2481 2068 487 62 0 49 chr10 51144703 51144784 -89171981 - L1PA16 LINE L1 -11 6155 6079 475 297 7 0 chr10 51146145 51146283 -89170482 - MIR SINE MIR -77 185 47 198 0 0 0 chr10 51146712 51146734 -89170031 + (T)n Simple_repeat Simple_repeat 1 22 0 2522 14 3 0 chr10 51146743 51147035 -89169730 - L1PA2 LINE L1 -2 6153 5861 1965 148 0 0 chr10 51147803 51148116 -89168649 - AluSx SINE Alu 0 313 1 27 29 0 0 chr10 51148400 51148434 -89168331 + AT_rich Low_complexity Low_complexity 1 34 0 1150 93 23 0 chr10 51148476 51148648 -89168117 - L1MA5A LINE L1 -76 6221 6046 1712 192 3 3 chr10 51148710 51149022 -89167743 - AluJb SINE Alu 0 312 1 305 242 153 113 chr10 51149312 51149560 -89167205 - L2 LINE L2 -61 3252 2995 33 0 0 0 chr10 51149957 51149990 -89166775 + AT_rich Low_complexity Low_complexity 1 33 0 693 35 0 0 chr10 51149990 51150076 -89166689 - L1PA3 LINE L1 -3 6152 6067 24 0 0 0 chr10 51150784 51150808 -89165957 + AT_rich Low_complexity Low_complexity 1 24 0 205 275 62 0 chr10 51151425 51151505 -89165260 - MER5A DNA MER1_type -23 166 82 189 0 0 0 chr10 51151515 51151536 -89165229 + (GA)n Simple_repeat Simple_repeat 1 21 0 233 122 61 0 chr10 51151542 51151591 -89165174 + (TGGG)n Simple_repeat Simple_repeat 4 55 0 735 191 0 0 chr10 51151974 51152105 -89164660 + FRAM SINE Alu 36 166 -10 242 94 0 0 chr10 51152235 51152267 -89164498 + Alu SINE Alu 49 80 -222 361 331 0 16 chr10 51152732 51152859 -89163906 - L1MEc LINE L1 -4421 1975 1851 539 324 130 32 chr10 51153047 51153553 -89163212 - MLT1K LTR MaLR -6 582 27 265 258 16 0 chr10 51154790 51154852 -89161913 - L2 LINE L2 -46 3226 3164 10303 173 21 34 chr10 51154895 51156383 -89160382 - L1MA9 LINE L1 -5 6307 4800 342 58 10 233 chr10 51156383 51156486 -89160279 + MADE1 DNA Mariner 1 80 0 10303 173 21 34 chr10 51156486 51156637 -89160128 - L1MA9 LINE L1 -1512 4800 4648 1848 153 3 32 chr10 51156637 51156945 -89159820 + AluJo SINE Alu 1 299 -13 10303 173 21 34 chr10 51156945 51158650 -89158115 - L1MA9 LINE L1 -1664 4648 3013 533 320 58 0 chr10 51159896 51160102 -89156663 - MIR SINE MIR -15 247 30 216 184 0 0 chr10 51160682 51160720 -89156045 + L2 LINE L2 3256 3293 -20 2126 122 0 0 chr10 51161063 51161351 -89155414 - AluSx SINE Alu -24 288 1 183 283 0 38 chr10 51164233 51164286 -89152479 - L2 LINE L2 -1 3312 3262 466 209 22 178 chr10 51164569 51164799 -89151966 - MIR SINE MIR -5 257 64 24 0 0 0 chr10 51165508 51165532 -89151233 + AT_rich Low_complexity Low_complexity 1 24 0 218 205 0 0 chr10 51165642 51165681 -89151084 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2026 128 3 0 chr10 51165681 51165963 -89150802 - AluSx SINE Alu -27 285 3 22 0 0 0 chr10 51166309 51166331 -89150434 + AT_rich Low_complexity Low_complexity 1 22 0 3217 32 0 0 chr10 51166331 51166708 -89150057 - L1PA3 LINE L1 -3 6152 5776 235 253 49 38 chr10 51166708 51166846 -89149919 - MIR SINE MIR -66 142 10 319 376 73 11 chr10 51167869 51168047 -89148718 - MIR SINE MIR -72 190 2 28 0 0 0 chr10 51168979 51169007 -89147758 + AT_rich Low_complexity Low_complexity 1 28 0 546 270 199 14 chr10 51169092 51169303 -89147462 - MIR SINE MIR -11 251 2 409 349 41 10 chr10 51170152 51170347 -89146418 + MIR SINE MIR 61 261 -1 1022 238 303 17 chr10 51170491 51171076 -89145689 - LTR50 LTR ERVL -43 752 1 5237 153 8 12 chr10 51171121 51172087 -89144678 + L1PB4 LINE L1 5180 6142 -14 239 358 155 34 chr10 51172171 51172378 -89144387 - L2 LINE L2 -8 3264 3033 24 0 0 0 chr10 51172442 51172466 -89144299 + AT_rich Low_complexity Low_complexity 1 24 0 304 273 64 18 chr10 51172557 51172667 -89144098 - L2 LINE L2 -21 3292 3178 212 329 29 138 chr10 51172952 51173192 -89143573 + L2 LINE L2 3002 3215 -57 2149 117 3 3 chr10 51173708 51174017 -89142748 - AluSp SINE Alu -4 309 1 257 50 0 25 chr10 51174916 51174956 -89141809 + (TG)n Simple_repeat Simple_repeat 1 39 0 1009 211 82 45 chr10 51175495 51175826 -89140939 + MER2 DNA MER2_type 1 343 -1 208 354 0 0 chr10 51177456 51177521 -89139244 - MIR SINE MIR -133 129 65 2186 103 0 3 chr10 51178251 51178568 -89138197 + AluSg SINE Alu 5 310 0 293 377 33 0 chr10 51179933 51180055 -89136710 + L2 LINE L2 3187 3312 -1 390 278 0 0 chr10 51180163 51180253 -89136512 + MIR SINE MIR 134 223 -39 25 31 0 0 chr10 51182910 51182942 -89133823 + AT_rich Low_complexity Low_complexity 1 32 0 531 305 89 9 chr10 51183014 51183227 -89133538 + MIR SINE MIR 23 252 -10 2799 97 35 2 chr10 51183333 51183756 -89133009 + L1MA2 LINE L1 5868 6304 0 494 219 78 0 chr10 51183816 51183944 -89132821 - MER33 DNA MER1_type -186 138 1 403 261 12 109 chr10 51184766 51184931 -89131834 - MIR SINE MIR -10 252 104 424 319 34 26 chr10 51185221 51185432 -89131333 + MIR SINE MIR 11 261 -1 1402 174 85 25 chr10 51185532 51185813 -89130952 + AluJo SINE Alu 1 298 -14 5185 157 30 26 chr10 51185815 51186311 -89130454 - L1MA4 LINE L1 -11 6289 5796 2042 46 70 49 chr10 51186311 51186595 -89130170 + AluY SINE Alu 1 290 -21 5185 157 30 26 chr10 51186595 51187106 -89129659 - L1MA4 LINE L1 -504 5796 5278 729 117 0 0 chr10 51187106 51187209 -89129556 - AluSx SINE Alu -12 297 195 1027 104 0 0 chr10 51187209 51187344 -89129421 - AluSx SINE Alu -177 135 1 1021 212 18 0 chr10 51187364 51187590 -89129175 - L1MA4 LINE L1 -894 5252 5023 2026 143 0 7 chr10 51188978 51189278 -89127487 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr10 51189319 51189348 -89127417 + AT_rich Low_complexity Low_complexity 1 29 0 5276 132 14 68 chr10 51189349 51189373 -89127392 - L1MA8 LINE L1 -10 6281 6257 1815 203 12 3 chr10 51189373 51189718 -89127047 - MER7A DNA MER2_type 0 346 1 5276 132 14 68 chr10 51189718 51191280 -89125485 - L1MA8 LINE L1 -34 6257 4784 2165 241 89 61 chr10 51191259 51191561 -89125204 - L1M1 LINE L1 -4402 3163 2871 * 227 54 27 0 chr10 51191561 51191598 -89125167 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2165 241 89 61 chr10 51191598 51191951 -89124814 - L1M1 LINE L1 -4694 2871 2530 2255 99 0 0 chr10 51191951 51192296 -89124469 - AluSx SINE Alu 0 345 1 2165 241 89 61 chr10 51192296 51192760 -89124005 - L1M1 LINE L1 -5035 2530 2010 2073 259 14 75 chr10 51192867 51193627 -89123138 - L1M1 LINE L1 -6310 1179 466 549 232 149 0 chr10 51194746 51194914 -89121851 - MIR SINE MIR 0 262 70 200 385 96 0 chr10 51195024 51195159 -89121606 + MIR SINE MIR 20 167 -95 726 256 78 7 chr10 51195162 51195355 -89121410 - MIR SINE MIR -21 241 38 349 318 45 15 chr10 51195716 51195848 -89120917 + L2 LINE L2 2596 2731 -583 471 63 0 0 chr10 51195979 51196042 -89120723 + (TC)n Simple_repeat Simple_repeat 1 63 0 226 214 0 17 chr10 51196210 51196298 -89120467 + L2 LINE L2 3175 3302 -11 207 69 0 0 chr10 51196300 51196329 -89120436 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 232 339 58 0 chr10 51196719 51196840 -89119925 + L3b LINE CR1 1262 1389 -194 1640 59 0 32 chr10 51196841 51197060 -89119705 - AluY SINE Alu -2 309 98 1163 131 0 11 chr10 51197385 51197561 -89119204 - AluSg/x SINE Alu -20 292 119 2007 140 0 0 chr10 51197916 51198228 -89118537 + AluSx SINE Alu 1 312 0 291 345 42 0 chr10 51198327 51198446 -89118319 - MER117 DNA MER1_type -27 170 47 5939 69 57 47 chr10 51198665 51200271 -89116494 + L1PA10 LINE L1 4551 6164 -4 31 44 0 0 chr10 51201315 51201360 -89115405 + AT_rich Low_complexity Low_complexity 1 45 0 649 271 106 16 chr10 51201422 51201858 -89114907 - L1ME4a LINE L1 -122 5999 5525 2172 128 55 0 chr10 51203556 51203901 -89112864 - THE1B LTR MaLR 0 364 1 34 110 0 0 chr10 51205352 51205498 -89111267 + AT_rich Low_complexity Low_complexity 1 146 0 2747 135 5 9 chr10 51205879 51206309 -89110456 - MSTA LTR MaLR 0 428 1 2487 56 0 3 chr10 51209625 51209931 -89106834 + AluY SINE Alu 1 305 -6 197 331 113 7 chr10 51210862 51211013 -89105752 - MIR SINE MIR -17 245 79 432 82 0 0 chr10 51211295 51211356 -89105409 + (TG)n Simple_repeat Simple_repeat 2 62 0 2163 122 0 0 chr10 51211358 51211644 -89105121 - AluSx SINE Alu -15 297 12 6869 139 10 33 chr10 51212266 51212614 -89104151 + L1MA2 LINE L1 3972 4326 -1978 6833 53 15 8 chr10 51212614 51214285 -89102480 - L1PA7 LINE L1 0 6154 4466 6869 139 10 33 chr10 51214285 51216321 -89100444 + L1MA2 LINE L1 4326 6301 -3 448 343 70 23 chr10 51216802 51217059 -89099706 + MIR SINE MIR 2 262 0 21 36 0 0 chr10 51217601 51217629 -89099136 + AT_rich Low_complexity Low_complexity 1 28 0 206 344 97 58 chr10 51218720 51218874 -89097891 + L2 LINE L2 3108 3267 -5 * 208 284 91 0 chr10 51218866 51218954 -89097811 + L2 LINE L2 3208 3303 -10 1303 212 213 37 chr10 51219853 51220386 -89096379 - MLT1F LTR MaLR -4 587 1 22 35 0 0 chr10 51221098 51221127 -89095638 + AT_rich Low_complexity Low_complexity 1 29 0 240 35 0 0 chr10 51221307 51221336 -89095429 + (TG)n Simple_repeat Simple_repeat 2 30 0 257 333 25 49 chr10 51222295 51222457 -89094308 + MIR SINE MIR 34 191 -71 25 0 0 0 chr10 51222934 51222959 -89093806 + AT_rich Low_complexity Low_complexity 1 25 0 217 342 72 9 chr10 51223093 51223204 -89093561 - MIR SINE MIR -7 255 138 821 162 0 0 chr10 51223988 51224124 -89092641 - FRAM SINE Alu -5 171 36 2174 67 0 3 chr10 51224488 51224772 -89091993 - L1PA7 LINE L1 0 6154 5872 288 335 35 40 chr10 51224848 51225021 -89091744 + MER5B DNA MER1_type 7 178 0 255 270 0 0 chr10 51226994 51227057 -89089708 + MIR SINE MIR 186 248 -14 436 246 185 8 chr10 51227476 51227606 -89089159 + MER5A DNA MER1_type 34 186 -3 201 244 0 0 chr10 51229539 51229580 -89087185 + L3 LINE CR1 1523 1563 -14 186 403 40 10 chr10 51229744 51229945 -89086820 + L2 LINE L2 2829 3035 -237 1457 142 3 6 chr10 51231048 51231340 -89085425 - MLT1A1 LTR MaLR 0 365 1 322 284 57 35 chr10 51231406 51231547 -89085218 - MIR3 SINE MIR -62 146 3 27 0 0 0 chr10 51232284 51232311 -89084454 + AT_rich Low_complexity Low_complexity 1 27 0 255 103 0 0 chr10 51232318 51232357 -89084408 + (GA)n Simple_repeat Simple_repeat 2 40 0 321 26 0 0 chr10 51232357 51232395 -89084370 + (TG)n Simple_repeat Simple_repeat 2 39 0 1054 169 35 23 chr10 51232467 51232728 -89084037 - MER33 DNA MER1_type -6 318 55 317 377 0 0 chr10 51233011 51233117 -89083648 + MIR SINE MIR 45 150 -112 726 157 15 22 chr10 51233117 51233251 -89083514 + FLAM_A SINE Alu 1 133 0 1649 266 48 43 chr10 51234079 51234910 -89081855 - L1M4 LINE L1 -1679 4467 3633 211 250 115 0 chr10 51234985 51235037 -89081728 + MIR SINE MIR 2 59 -203 782 258 21 11 chr10 51235060 51235250 -89081515 - MLT1E LTR MaLR -7 586 395 1171 130 16 11 chr10 51235311 51235495 -89081270 - L1PA10 LINE L1 -21 6147 5963 1124 63 19 25 chr10 51235495 51235653 -89081112 + L1PA10 LINE L1 5734 5890 -278 1621 108 9 0 chr10 51235721 51235943 -89080822 + AluSq SINE Alu 1 224 -89 186 43 0 0 chr10 51235953 51235976 -89080789 + (TA)n Simple_repeat Simple_repeat 1 23 0 2370 58 43 21 chr10 51235976 51236304 -89080461 - L1PA7 LINE L1 -19 6135 5801 1098 185 8 134 chr10 51236318 51236669 -89080096 + MLT1A1 LTR MaLR 56 362 -3 * 1477 242 66 36 chr10 51236669 51237054 -89079711 - MLT1E LTR MaLR -195 398 2 449 339 18 0 chr10 51237060 51237228 -89079537 + MIR SINE MIR 91 261 -1 1218 181 8 17 chr10 51237230 51237468 -89079297 - MER46A DNA MER2_type 0 236 1 377 301 92 14 chr10 51237479 51237709 -89079056 - L2 LINE L2 -39 3274 2971 232 319 66 28 chr10 51238251 51238464 -89078301 - L1ME LINE L1 -299 5822 5602 2028 121 10 10 chr10 51238523 51238836 -89077929 - AluSq SINE Alu 0 313 1 468 269 56 31 chr10 51239047 51239207 -89077558 + MIR SINE MIR 10 173 -89 537 298 70 31 chr10 51239409 51239637 -89077128 + Charlie8 DNA MER1_type 11 247 -2170 430 297 115 22 chr10 51240492 51240724 -89076041 + MIR SINE MIR 1 249 -13 369 313 48 7 chr10 51240871 51241018 -89075747 + MIR SINE MIR 23 175 -87 266 276 82 0 chr10 51241200 51241298 -89075467 - MIR SINE MIR -56 206 101 258 299 27 34 chr10 51241926 51242073 -89074692 + L2 LINE L2 3041 3186 -127 239 320 13 0 chr10 51242076 51242154 -89074611 - MER63 DNA MER1_type 0 1062 984 432 97 0 0 chr10 51242154 51242216 -89074549 - MER63 DNA MER1_type -104 732 671 294 258 73 57 chr10 51242241 51242365 -89074400 + L2 LINE L2 3179 3304 -9 608 118 0 0 chr10 51242378 51242463 -89074302 + AluSx SINE Alu 1 85 -227 1728 109 0 0 chr10 51242916 51243146 -89073619 + AluSx SINE Alu 82 311 -1 260 172 0 16 chr10 51243159 51243223 -89073542 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 241 254 14 0 chr10 51244459 51244530 -89072235 - MLT1L LTR MaLR 0 615 544 322 262 24 83 chr10 51244859 51245027 -89071738 - MLT1L LTR MaLR -415 200 43 243 250 100 0 chr10 51245070 51245150 -89071615 - MIR SINE MIR -110 152 65 752 235 28 72 chr10 51245218 51245469 -89071296 - MIR SINE MIR -10 252 13 198 288 270 0 chr10 51246243 51246354 -89070411 + MIR3 SINE MIR 3 143 -65 1950 205 9 43 chr10 51248153 51248617 -89068148 - MLT2B1 LTR ERVL -72 448 1 315 318 19 32 chr10 51248868 51249022 -89067743 - MIR SINE MIR -59 203 52 380 229 34 34 chr10 51249028 51249146 -89067619 + MER45A DNA AcHobo 1 118 -60 230 193 18 0 chr10 51249146 51249203 -89067562 + (TA)n Simple_repeat Simple_repeat 2 59 0 424 122 0 40 chr10 51249217 51249291 -89067474 + MER45A DNA AcHobo 105 175 -3 25 31 0 0 chr10 51249712 51249744 -89067021 + AT_rich Low_complexity Low_complexity 1 32 0 252 348 161 13 chr10 51250079 51250234 -89066531 - MIR3 SINE MIR -10 198 21 270 299 7 71 chr10 51251376 51251530 -89065235 + MIR SINE MIR 33 176 -86 753 171 116 28 chr10 51252622 51252803 -89063962 + MER20 DNA MER1_type 23 219 0 291 301 66 48 chr10 51252823 51252989 -89063776 - MIR SINE MIR -73 189 21 6601 66 53 68 chr10 51253976 51255359 -89061406 - SVA Other Other -553 1380 433 363 214 11 0 chr10 51255977 51256066 -89060699 - MLT1H1 LTR MaLR -2 553 464 361 271 91 34 chr10 51256179 51256484 -89060281 - MLT1H1 LTR MaLR -264 326 1 417 262 178 22 chr10 51256583 51256768 -89059997 - MIR SINE MIR -54 208 2 1307 227 51 17 chr10 51257990 51258113 -89058652 + AluJo SINE Alu 1 118 -194 180 0 0 0 chr10 51258113 51258133 -89058632 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 1307 227 51 17 chr10 51258133 51258304 -89058461 + AluJo SINE Alu 118 305 -7 838 216 148 50 chr10 51258716 51259095 -89057670 + MER96B DNA MER1_type? 2 417 0 180 375 42 0 chr10 51259138 51259234 -89057531 - L3 LINE CR1 -2 1575 1476 2194 133 0 29 chr10 51260025 51260372 -89056393 - MER1B DNA MER1_type 0 337 1 1473 224 36 74 chr10 51260493 51260992 -89055773 + MLT2B1 LTR ERVL 1 480 -40 273 214 51 8 chr10 51260993 51261110 -89055655 + (TA)n Simple_repeat Simple_repeat 1 122 0 235 125 50 0 chr10 51261201 51261241 -89055524 + MLT2D LTR ERVL 373 414 0 822 321 100 11 chr10 51261983 51262113 -89054652 - L2 LINE L2 0 3313 3196 192 77 0 0 chr10 51262113 51262139 -89054626 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 822 321 100 11 chr10 51262139 51262369 -89054396 - L2 LINE L2 -117 3196 2921 916 183 93 55 chr10 51262919 51263230 -89053535 - MER33 DNA MER1_type 0 324 2 447 223 206 40 chr10 51265349 51265524 -89051241 - MIR SINE MIR -12 250 47 350 137 0 0 chr10 51267084 51267135 -89049630 - Tigger5 DNA MER2_type 0 2323 2273 3165 88 16 9 chr10 51268676 51269117 -89047648 - MLT2A1 LTR ERVL 0 444 1 18571 76 17 7 chr10 51269117 51271457 -89045308 - HERVL-A1 LTR ERVL 0 5654 3285 1992 125 17 7 chr10 51271457 51271753 -89045012 + AluSc SINE Alu 1 299 -10 18571 76 17 7 chr10 51271753 51271979 -89044786 - HERVL-A1 LTR ERVL -2369 3285 3063 2640 75 33 112 chr10 51272007 51272109 -89044656 - MLT2A1 LTR ERVL -1 443 335 438 108 0 0 chr10 51272109 51272174 -89044591 + (TG)n Simple_repeat Simple_repeat 2 66 0 2640 75 33 112 chr10 51272174 51272552 -89044213 - MLT2A1 LTR ERVL -109 335 1 225 268 24 8 chr10 51272647 51272774 -89043991 + (TA)n Simple_repeat Simple_repeat 1 129 0 2019 124 0 21 chr10 51272884 51273175 -89043590 - AluSx SINE Alu -19 293 9 444 67 0 0 chr10 51274053 51274113 -89042652 + (GA)n Simple_repeat Simple_repeat 1 60 0 2087 138 0 3 chr10 51274249 51274553 -89042212 + AluSg SINE Alu 5 307 -3 2030 112 30 7 chr10 51275238 51275541 -89041224 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 51275743 51275766 -89040999 + (TTG)n Simple_repeat Simple_repeat 2 24 0 477 337 71 5 chr10 51275840 51276036 -89040729 + MIR SINE MIR 19 227 -35 766 273 128 4 chr10 51276826 51277053 -89039712 - MIR SINE MIR 0 262 8 311 273 48 79 chr10 51277072 51277237 -89039528 - MIR SINE MIR -12 250 91 393 58 0 0 chr10 51277792 51277844 -89038921 + (TG)n Simple_repeat Simple_repeat 2 53 0 425 232 179 12 chr10 51278378 51278546 -89038219 + MIR SINE MIR 48 243 -19 255 306 12 12 chr10 51279254 51279339 -89037426 - MIR3 SINE MIR -54 154 70 24 0 0 0 chr10 51281082 51281106 -89035659 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 51281679 51281700 -89035065 + AT_rich Low_complexity Low_complexity 1 21 0 535 197 17 0 chr10 51282009 51282126 -89034639 - MSTA LTR MaLR -132 296 178 245 322 61 26 chr10 51282185 51282300 -89034465 - MER5A DNA MER1_type -30 159 41 351 296 9 9 chr10 51282329 51282437 -89034328 + MER5B DNA MER1_type 9 116 -62 2248 145 75 8 chr10 51282566 51282965 -89033800 - MSTB LTR MaLR 0 426 1 234 0 0 0 chr10 51283042 51283068 -89033697 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1612 194 0 24 chr10 51283070 51283359 -89033406 - AluJo SINE Alu -30 282 1 440 204 91 76 chr10 51283718 51283850 -89032915 + MIR3 SINE MIR 34 167 -41 205 158 0 123 chr10 51283881 51283938 -89032827 - L2 LINE L2 0 3313 3264 21 0 0 0 chr10 51285685 51285706 -89031059 + AT_rich Low_complexity Low_complexity 1 21 0 248 274 96 52 chr10 51285981 51286116 -89030649 - MIR3 SINE MIR -26 182 42 206 152 0 22 chr10 51286876 51286922 -89029843 + CT-rich Low_complexity Low_complexity 2 46 0 2104 104 0 17 chr10 51287874 51288197 -89028568 + AluSx SINE Alu 1 318 0 184 303 0 66 chr10 51288211 51288287 -89028478 - L2 LINE L2 -14 3258 3188 201 260 0 0 chr10 51289068 51289145 -89027620 + GA-rich Low_complexity Low_complexity 2 78 0 235 219 250 0 chr10 51289563 51289627 -89027138 + MER5A DNA MER1_type 12 91 -98 427 291 35 20 chr10 51290312 51290511 -89026254 + L1M4b LINE L1 11 212 -6647 1935 243 65 102 chr10 51290701 51291970 -89024795 + L1M4b LINE L1 802 2022 -4833 2349 224 69 29 chr10 51291980 51292014 -89024751 + L1ME1 LINE L1 5453 5484 -682 1863 159 3 19 chr10 51292014 51292328 -89024437 + AluJo SINE Alu 1 309 -3 2349 224 69 29 chr10 51292328 51292977 -89023788 + L1ME1 LINE L1 5484 6163 -3 1938 249 101 12 chr10 51293077 51293639 -89023126 - MER74B LTR ERVL -10 612 1 186 43 0 0 chr10 51293748 51293771 -89022994 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr10 51294174 51294196 -89022569 + AT_rich Low_complexity Low_complexity 1 22 0 303 294 48 32 chr10 51295825 51295951 -89020814 - MIR SINE MIR -61 147 20 204 40 0 0 chr10 51297120 51297145 -89019620 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 238 48 0 48 chr10 51297305 51297347 -89019418 + (TA)n Simple_repeat Simple_repeat 2 41 0 206 293 122 0 chr10 51297528 51297610 -89019155 - L2 LINE L2 -1 3271 3180 274 296 91 81 chr10 51297925 51298111 -89018654 + MIR SINE MIR 66 253 -9 265 310 51 56 chr10 51298688 51298885 -89017880 - MIR SINE MIR -62 200 5 884 239 18 31 chr10 51299621 51299843 -89016922 + MER20 DNA MER1_type 1 219 0 403 351 152 6 chr10 51299857 51300022 -89016743 + MER5A DNA MER1_type 1 189 0 2485 182 36 17 chr10 51300055 51300583 -89016182 - L1MC3 LINE L1 -21 7764 7227 21 0 0 0 chr10 51300879 51300900 -89015865 + AT_rich Low_complexity Low_complexity 1 21 0 180 337 87 0 chr10 51301225 51301317 -89015448 - L3 LINE CR1 -189 1388 1289 203 360 88 8 chr10 51301925 51302050 -89014715 - MIR3 SINE MIR -70 138 4 486 190 0 0 chr10 51302141 51302220 -89014545 + Tigger5 DNA MER2_type 1 79 -2244 320 330 55 55 chr10 51303466 51303666 -89013099 + MIR3 SINE MIR 3 202 -6 252 269 161 15 chr10 51304703 51304833 -89011932 - MLT1G1 LTR MaLR -41 501 353 297 273 110 34 chr10 51304843 51305004 -89011761 - MLT1G1 LTR MaLR -360 189 11 1286 202 0 5 chr10 51305053 51305276 -89011489 + MER58A DNA MER1_type 3 224 0 300 304 7 58 chr10 51305568 51305706 -89011059 - MER5B DNA MER1_type -1 177 47 762 201 82 10 chr10 51306882 51307076 -89009689 + MER3 DNA MER1_type 1 208 -1 184 306 162 18 chr10 51307804 51307915 -89008850 - L2 LINE L2 -3 3269 3143 869 278 36 0 chr10 51308853 51309101 -89007664 - MER46C DNA MER2_type 0 338 82 1216 181 32 0 chr10 51309911 51309941 -89006824 + AluJb SINE Alu 87 115 -197 180 77 0 0 chr10 51309941 51309967 -89006798 + (CA)n Simple_repeat Simple_repeat 1 26 0 1216 181 32 0 chr10 51309967 51310152 -89006613 + AluJb SINE Alu 115 309 -3 194 0 39 0 chr10 51311112 51311138 -89005627 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1423 234 82 13 chr10 51312852 51313326 -89003439 - Charlie4a DNA MER1_type -1 507 1 1075 221 38 19 chr10 51313914 51314177 -89002588 - L1MB8 LINE L1 -1 6177 5910 * 6111 223 6 14 chr10 51314176 51315632 -89001133 - L1PB2 LINE L1 -2001 4145 2703 3083 226 7 4 chr10 51315631 51316380 -89000385 + L1PB2 LINE L1 4147 4897 -1249 * 2298 122 11 24 chr10 51316382 51316751 -89000014 - THE1B LTR MaLR 0 364 1 982 137 0 0 chr10 51316755 51316908 -88999857 - THE1B-int LTR MaLR -4 1576 1424 6097 92 14 57 chr10 51316911 51317851 -88998914 - THE1B-int LTR MaLR -681 899 1 2361 124 8 27 chr10 51317851 51318222 -88998543 - THE1B LTR MaLR 0 364 1 5770 141 22 5 chr10 51318227 51319458 -88997307 + L1PB2 LINE L1 4900 6148 -3 726 158 134 1 chr10 51319460 51319625 -88997140 - L1MB5 LINE L1 -233 5935 5751 237 204 19 19 chr10 51319724 51319778 -88996987 - L3b LINE CR1 -255 1328 1275 207 295 33 0 chr10 51320431 51320492 -88996273 - MIR SINE MIR -89 173 111 551 211 6 3 chr10 51320648 51320839 -88995926 - MER8 DNA MER2_type 0 239 2 506 276 43 25 chr10 51321444 51321607 -88995158 - MIR SINE MIR -58 204 39 975 185 92 5 chr10 51321896 51322091 -88994674 - MER20 DNA MER1_type 0 219 8 22 35 0 0 chr10 51324782 51324811 -88991954 + AT_rich Low_complexity Low_complexity 1 29 0 1771 110 17 67 chr10 51325868 51326168 -88990597 + AluSc SINE Alu 5 289 -20 2698 17 0 0 chr10 51326484 51326785 -88989980 + AluY SINE Alu 1 301 -10 816 289 46 42 chr10 51327738 51327998 -88988767 - MIR SINE MIR -1 261 1 27 29 0 0 chr10 51328436 51328470 -88988295 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 51331186 51331208 -88985557 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 51332964 51332995 -88983770 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 51333191 51333220 -88983545 + AT_rich Low_complexity Low_complexity 1 29 0 277 373 10 0 chr10 51336003 51336105 -88980660 - MIR SINE MIR -97 165 63 719 188 82 6 chr10 51337135 51337305 -88979460 + MER5A DNA MER1_type 2 184 -5 189 0 0 0 chr10 51338475 51338496 -88978269 + (TTG)n Simple_repeat Simple_repeat 1 21 0 308 339 31 8 chr10 51338787 51338917 -88977848 - MIR SINE MIR -53 209 77 558 308 80 5 chr10 51339303 51339527 -88977238 + MIR SINE MIR 8 248 -14 264 88 0 0 chr10 51343047 51343081 -88973684 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 324 164 0 0 chr10 51343081 51343148 -88973617 + CT-rich Low_complexity Low_complexity 3 69 0 1788 156 0 7 chr10 51343148 51343423 -88973342 - AluSx SINE Alu -39 273 1 389 267 107 20 chr10 51344627 51344777 -88971988 + MIR SINE MIR 87 249 -13 2252 106 3 28 chr10 51344875 51345195 -88971570 - AluSq SINE Alu -1 312 1 905 163 0 0 chr10 51346310 51346451 -88970314 - AluJb SINE Alu -171 141 1 180 128 26 26 chr10 51346493 51346532 -88970233 - L2 LINE L2 -9 3304 3266 23 0 0 0 chr10 51347052 51347075 -88969690 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 51347957 51347987 -88968778 + AT_rich Low_complexity Low_complexity 1 30 0 943 208 5 5 chr10 51348008 51348210 -88968555 - L1MB1 LINE L1 -80 6109 5908 584 253 6 12 chr10 51348209 51348375 -88968390 + L1MA10 LINE L1 6167 6331 -3 * 529 233 0 17 chr10 51349387 51349507 -88967258 + MLT1E LTR MaLR 21 138 -455 216 331 211 7 chr10 51350940 51351082 -88965683 - L2 LINE L2 -3 3269 3099 226 341 0 11 chr10 51351126 51351214 -88965551 - L2 LINE L2 -272 3000 2914 732 194 146 0 chr10 51351286 51351451 -88965314 + MER5A DNA MER1_type 1 189 0 181 237 23 181 chr10 51351493 51351708 -88965057 - L2 LINE L2 -561 2753 2573 310 283 185 11 chr10 51352337 51352521 -88964244 - MIR SINE MIR -9 253 38 428 295 10 70 chr10 51352585 51352785 -88963980 + L1ME3A LINE L1 5494 5681 -440 251 359 88 13 chr10 51353322 51353481 -88963284 - MIR3 SINE MIR -6 202 32 721 236 19 0 chr10 51355934 51356095 -88960670 - FRAM SINE Alu -2 164 1 2180 102 3 3 chr10 51356975 51357268 -88959497 - AluSx SINE Alu -19 293 1 346 327 0 18 chr10 51358949 51359059 -88957706 + MIR SINE MIR 44 151 -57 441 317 43 6 chr10 51359198 51359359 -88957406 - L2 LINE L2 0 3313 3147 220 234 43 0 chr10 51359972 51360019 -88956746 - L2 LINE L2 -9 3304 3256 481 146 117 11 chr10 51360362 51360479 -88956286 + L1MA8 LINE L1 6162 6281 -10 1626 161 9 68 chr10 51361528 51361850 -88954915 + AluJo SINE Alu 1 303 -9 344 75 19 0 chr10 51362784 51362837 -88953928 + MADE1 DNA Mariner 1 54 -26 333 307 6 25 chr10 51363694 51363857 -88952908 + T-rich Low_complexity Low_complexity 3 162 0 401 348 130 20 chr10 51364579 51365036 -88951729 + L2 LINE L2 1366 1886 -1428 1007 251 45 70 chr10 51365036 51365435 -88951330 + MLT1B LTR MaLR 2 390 0 401 348 130 20 chr10 51365435 51365486 -88951279 + L2 LINE L2 1886 1930 -1384 346 252 75 0 chr10 51365606 51365713 -88951052 + L1ME3A LINE L1 5759 5873 -297 664 181 99 39 chr10 51365767 51365949 -88950816 - L2 LINE L2 -3 3310 3118 211 274 160 9 chr10 51366148 51366254 -88950511 + L2 LINE L2 2217 2338 -976 5762 99 9 39 chr10 51367237 51369058 -88947707 - L1PA14 LINE L1 -3 6158 4376 690 327 36 20 chr10 51369538 51369786 -88946979 - MIR SINE MIR -10 252 1 877 285 56 90 chr10 51369874 51370267 -88946498 - L2 LINE L2 -349 2965 2591 1954 113 0 7 chr10 51370267 51370541 -88946224 + AluY SINE Alu 40 311 0 877 285 56 90 chr10 51370541 51370646 -88946119 - L2 LINE L2 -723 2591 2484 1435 198 10 40 chr10 51370794 51371092 -88945673 + AluJo SINE Alu 1 289 -23 531 273 18 6 chr10 51371570 51371735 -88945030 + L1MC4a LINE L1 5769 5935 -1873 656 239 72 0 chr10 51372000 51372180 -88944585 - L1MC/D LINE L1 -2042 5766 5574 531 234 278 15 chr10 51372222 51372427 -88944338 + MIR SINE MIR 4 262 0 251 272 43 43 chr10 51372708 51372800 -88943965 - MER5B DNA MER1_type 0 178 87 477 294 27 7 chr10 51372864 51373010 -88943755 + L2 LINE L2 3116 3264 -8 1028 146 18 0 chr10 51374806 51374971 -88941794 - FRAM SINE Alu -9 167 1 199 355 33 50 chr10 51376188 51376309 -88940456 + MIR3 SINE MIR 85 203 -5 3046 174 110 36 chr10 51377531 51377593 -88939172 + L1MDa LINE L1 1009 1065 -5475 1960 164 0 16 chr10 51377593 51377910 -88938855 + AluJb SINE Alu 1 312 0 3046 174 110 36 chr10 51377910 51378655 -88938110 + L1MDa LINE L1 1065 1876 -4664 2166 156 69 10 chr10 51379056 51379460 -88937305 - MSTA LTR MaLR 0 428 1 2473 62 0 10 chr10 51380452 51380758 -88936007 - AluSg SINE Alu -7 303 1 349 167 0 0 chr10 51380759 51380813 -88935952 - Alu SINE Alu -254 54 1 2107 122 3 0 chr10 51380826 51381122 -88935643 - AluSx SINE Alu -15 297 1 225 252 168 8 chr10 51381189 51381308 -88935457 - MIR3 SINE MIR -58 150 13 300 130 241 0 chr10 51381466 51381520 -88935245 + MER4E LTR ERV1 640 706 -73 905 102 8 0 chr10 51381720 51381848 -88934917 + AluJb SINE Alu 1 129 -183 287 336 80 0 chr10 51382198 51382323 -88934442 - MIR SINE MIR -98 164 30 270 0 0 0 chr10 51382387 51382417 -88934348 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1287 166 73 89 chr10 51382581 51382883 -88933882 - AluJb SINE Alu -15 297 1 883 279 40 66 chr10 51383338 51383765 -88933000 + MLT1L LTR MaLR 200 615 0 385 272 150 17 chr10 51383955 51384135 -88932630 - MIR SINE MIR -30 232 29 186 43 0 0 chr10 51384614 51384637 -88932128 + (T)n Simple_repeat Simple_repeat 1 23 0 422 370 5 26 chr10 51385348 51385540 -88931225 + MIR SINE MIR 16 203 -59 14636 34 1 1 chr10 51387080 51388851 -88927914 - L1PA4 LINE L1 -1275 4871 3100 7124 48 6 0 chr10 51388851 51390141 -88926624 + L1PA4 LINE L1 4860 6154 -1 662 259 174 5 chr10 51390838 51391050 -88925715 + MIR SINE MIR 12 259 -3 652 174 8 30 chr10 51392357 51392489 -88924276 - FLAM_C SINE Alu -1 142 14 181 238 79 32 chr10 51392562 51392625 -88924140 - MIR SINE MIR -90 172 107 690 205 22 11 chr10 51393030 51393215 -88923550 - L1MA8 LINE L1 -6 6285 6099 399 174 196 11 chr10 51393217 51393309 -88923456 - Tigger1 DNA MER2_type -14 2404 2296 2133 94 3 36 chr10 51393572 51393880 -88922885 - AluSg SINE Alu -12 298 1 1206 308 94 14 chr10 51394138 51394990 -88921775 + L1ME1 LINE L1 5103 6031 -135 24 0 0 0 chr10 51394997 51395021 -88921744 + AT_rich Low_complexity Low_complexity 1 24 0 7857 17 0 0 chr10 51395022 51395924 -88920841 - L1PA2 LINE L1 0 6155 5254 9707 25 0 0 chr10 51395926 51397109 -88919656 + L1P LINE L1 2240 3422 -2724 357 239 60 0 chr10 51397112 51397229 -88919536 + L1ME3A LINE L1 6041 6164 -6 1216 185 10 0 chr10 51397706 51397906 -88918859 - MER20 DNA MER1_type -2 217 16 21 95 0 0 chr10 51397938 51398001 -88918764 + AT_rich Low_complexity Low_complexity 1 63 0 1385 194 80 118 chr10 51398548 51399417 -88917348 - LTR28 LTR ERV1 -7 819 1 521 294 6 38 chr10 51399573 51399733 -88917032 - L2 LINE L2 -4 3309 3155 801 310 106 9 chr10 51399866 51400195 -88916570 - MER34 LTR ERV1 -23 519 159 363 267 112 21 chr10 51400201 51400388 -88916377 - L2 LINE L2 -731 2583 2380 2126 117 3 0 chr10 51400832 51401123 -88915642 - AluSx SINE Alu -19 293 2 204 314 45 90 chr10 51401329 51401485 -88915280 - L2 LINE L2 -593 2721 2573 385 343 70 19 chr10 51402044 51402257 -88914508 - MIR SINE MIR -18 244 21 392 301 84 7 chr10 51402738 51402881 -88913884 - MIR SINE MIR -17 245 92 251 175 31 10 chr10 51403025 51403122 -88913643 + (TA)n Simple_repeat Simple_repeat 1 99 0 30 27 0 0 chr10 51403157 51403194 -88913571 + AT_rich Low_complexity Low_complexity 1 37 0 327 279 74 25 chr10 51403283 51403405 -88913360 + L2 LINE L2 3186 3313 0 305 283 125 71 chr10 51403464 51403761 -88913004 + L3b LINE CR1 1187 1499 -84 241 294 0 78 chr10 51403802 51403837 -88912928 + L2 LINE L2 3219 3255 -58 1999 106 14 10 chr10 51403837 51404130 -88912635 + AluSx SINE Alu 3 296 -16 241 294 0 78 chr10 51404130 51404196 -88912569 + L2 LINE L2 3255 3312 -1 184 350 115 51 chr10 51406396 51406553 -88910212 - MIR3 SINE MIR -23 185 19 1865 203 54 5 chr10 51406702 51407110 -88909655 + MSTA LTR MaLR 1 428 0 1186 240 93 3 chr10 51407160 51407473 -88909292 - MER58B DNA MER1_type 0 341 1 381 160 16 16 chr10 51407972 51408097 -88908668 + GA-rich Low_complexity Low_complexity 1 125 0 198 0 0 0 chr10 51408098 51408120 -88908645 + (GGAA)n Simple_repeat Simple_repeat 3 24 0 2443 87 0 0 chr10 51408243 51408554 -88908211 + AluY SINE Alu 1 311 0 784 202 98 49 chr10 51408619 51408656 -88908109 + MER33 DNA MER1_type 2 36 -2549 1997 132 24 3 chr10 51408656 51408944 -88907821 - AluSx SINE Alu -16 296 3 784 202 98 49 chr10 51408944 51409175 -88907590 + MER33 DNA MER1_type 36 287 -2298 451 188 0 0 chr10 51409175 51409255 -88907510 - MADE1 DNA Mariner 0 80 1 784 202 98 49 chr10 51409255 51409272 -88907493 + MER33 DNA MER1_type 287 302 -22 336 260 55 55 chr10 51409553 51409699 -88907066 - L1MEd LINE L1 -5958 161 16 999 207 77 5 chr10 51409754 51409976 -88906789 - MER58B DNA MER1_type 0 341 104 23 54 0 0 chr10 51410083 51410120 -88906645 + AT_rich Low_complexity Low_complexity 1 37 0 595 229 83 10 chr10 51411030 51411222 -88905543 - MER113 DNA MER1_type? -298 223 18 693 302 135 21 chr10 51411949 51412584 -88904181 + L2 LINE L2 2461 3171 -142 2186 107 7 3 chr10 51414461 51414769 -88901996 - AluSg SINE Alu -1 309 1 187 203 34 0 chr10 51415658 51415717 -88901048 + CT-rich Low_complexity Low_complexity 2 62 0 250 320 107 10 chr10 51416163 51416266 -88900499 - MIR SINE MIR -62 146 34 451 258 0 0 chr10 51416355 51416444 -88900321 - MER63 DNA MER1_type -297 765 677 23 33 0 0 chr10 51416499 51416529 -88900236 + AT_rich Low_complexity Low_complexity 1 30 0 367 319 9 9 chr10 51416719 51416835 -88899930 - MIR3 SINE MIR -46 162 47 2466 65 3 0 chr10 51417213 51417521 -88899244 + AluY SINE Alu 1 309 -2 23 33 0 0 chr10 51418500 51418530 -88898235 + AT_rich Low_complexity Low_complexity 1 30 0 1988 135 7 0 chr10 51418552 51418849 -88897916 - AluSx SINE Alu -13 299 1 237 231 19 0 chr10 51419004 51419056 -88897709 - MIR SINE MIR -96 112 60 1705 175 38 35 chr10 51419094 51419476 -88897289 - L1P4 LINE L1 -735 5431 5060 2492 43 0 0 chr10 51419476 51419777 -88896988 - L1PA3 LINE L1 0 6155 5855 1705 175 38 35 chr10 51419777 51419902 -88896863 - L1P4 LINE L1 -1106 5060 4937 28 0 0 0 chr10 51419978 51420006 -88896759 + AT_rich Low_complexity Low_complexity 1 28 0 317 316 0 34 chr10 51420015 51420132 -88896633 + L2 LINE L2 3199 3311 -2 2183 104 10 0 chr10 51420277 51420575 -88896190 + AluSg SINE Alu 1 301 -9 266 360 14 20 chr10 51420575 51420722 -88896043 - MER5B DNA MER1_type -32 146 1 325 338 55 14 chr10 51420810 51420955 -88895810 - MIR SINE MIR -110 152 2 293 56 79 48 chr10 51421166 51421292 -88895473 + (TA)n Simple_repeat Simple_repeat 1 130 0 2187 111 3 0 chr10 51423536 51423843 -88892922 - AluSg SINE Alu -2 308 1 2172 137 0 20 chr10 51423882 51424226 -88892539 - MER1B DNA MER1_type 0 337 1 408 337 102 5 chr10 51425104 51425291 -88891474 - MIR SINE MIR 0 262 58 293 336 62 0 chr10 51425633 51425746 -88891019 + MIR3 SINE MIR 82 201 -7 474 297 180 32 chr10 51425902 51426303 -88890462 + L3 LINE CR1 570 1029 -548 5667 45 0 6 chr10 51426883 51427589 -88889176 - L1PA5 LINE L1 -5 6149 5448 1406 35 0 10 chr10 51427589 51427813 -88888952 + L1PA5 LINE L1 5222 5443 -711 21 0 0 0 chr10 51427813 51427834 -88888931 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr10 51430139 51430175 -88886590 + AT_rich Low_complexity Low_complexity 1 36 0 308 247 0 25 chr10 51430185 51430266 -88886499 - MER116 DNA Mariner -1 79 1 1858 92 0 8 chr10 51431938 51432187 -88884578 - AluSg SINE Alu 0 310 64 507 308 13 13 chr10 51436312 51436468 -88880297 + L2 LINE L2 2588 2743 -571 412 171 59 6 chr10 51436534 51436704 -88880061 + (TA)n Simple_repeat Simple_repeat 2 180 0 474 249 34 28 chr10 51436720 51436897 -88879868 + (TATG)n Simple_repeat Simple_repeat 2 179 0 355 191 36 30 chr10 51436920 51437088 -88879677 + (TA)n Simple_repeat Simple_repeat 2 170 0 654 134 38 0 chr10 51437104 51437250 -88879515 + (TA)n Simple_repeat Simple_repeat 1 155 -8 198 0 0 0 chr10 51437250 51437272 -88879493 + (TG)n Simple_repeat Simple_repeat 2 23 0 654 134 38 0 chr10 51437272 51437282 -88879483 + (TA)n Simple_repeat Simple_repeat 155 163 0 249 359 84 59 chr10 51437310 51437630 -88879135 + L2 LINE L2 2945 3272 0 22 0 0 0 chr10 51437686 51437708 -88879057 + AT_rich Low_complexity Low_complexity 1 22 0 277 284 29 20 chr10 51438622 51438724 -88878041 + MIR3 SINE MIR 100 202 -6 379 313 8 8 chr10 51438793 51438921 -88877844 + GA-rich Low_complexity Low_complexity 4 131 0 31 82 0 0 chr10 51439162 51439235 -88877530 + AT_rich Low_complexity Low_complexity 1 73 0 2627 146 32 2 chr10 51439276 51439714 -88877051 + L1PA16 LINE L1 5707 6157 -9 377 315 55 35 chr10 51440318 51440518 -88876247 + MIR SINE MIR 17 220 -42 24 0 0 0 chr10 51441238 51441262 -88875503 + AT_rich Low_complexity Low_complexity 1 24 0 1335 129 132 66 chr10 51441711 51442029 -88874736 + MER44D DNA MER2_type 1 609 0 936 185 76 19 chr10 51442397 51442608 -88874157 - AluJb SINE Alu -2 310 88 764 138 0 0 chr10 51443683 51443799 -88872966 - FLAM_C SINE Alu -17 116 1 298 85 34 0 chr10 51444128 51444187 -88872578 + (TA)n Simple_repeat Simple_repeat 2 62 0 540 153 126 0 chr10 51445370 51445481 -88871284 + L1ME LINE L1 5542 5666 -500 1496 106 27 34 chr10 51445516 51445808 -88870957 + AluY SINE Alu 1 290 -21 790 22 0 0 chr10 51446324 51446415 -88870350 + MER11D LTR ERVK 1 91 -806 6069 47 45 3 chr10 51446433 51447208 -88869557 + MER11D LTR ERVK 1 808 -89 1159 136 11 57 chr10 51447702 51447966 -88868799 + MER11D LTR ERVK 646 897 0 22 80 0 0 chr10 51448125 51448175 -88868590 + AT_rich Low_complexity Low_complexity 1 50 0 21 82 0 0 chr10 51448323 51448372 -88868393 + AT_rich Low_complexity Low_complexity 1 49 0 257 334 26 32 chr10 51448372 51448713 -88868052 + L1ME LINE L1 5408 5904 -266 2226 110 27 0 chr10 51449577 51449878 -88866887 + AluSx SINE Alu 1 309 -3 511 194 194 7 chr10 51451505 51451660 -88865105 - L1MC3 LINE L1 0 7785 7602 30 59 0 0 chr10 51451668 51451719 -88865046 + AT_rich Low_complexity Low_complexity 1 51 0 814 165 0 241 chr10 51451972 51452366 -88864399 + AluY SINE Alu 1 299 -2 348 323 115 21 chr10 51452441 51452633 -88864132 - MIR SINE MIR 0 262 53 263 246 14 14 chr10 51452633 51452702 -88864063 + GA-rich Low_complexity Low_complexity 1 69 0 2185 122 0 3 chr10 51452950 51453246 -88863519 + AluSx SINE Alu 1 295 -17 1645 177 0 38 chr10 51453776 51454084 -88862681 - AluJo SINE Alu 0 302 6 1504 141 38 0 chr10 51454171 51454434 -88862331 + L1MA5A LINE L1 6004 6276 -21 642 297 64 72 chr10 51455139 51455221 -88861544 - L2 LINE L2 -10 3303 3222 225 0 0 0 chr10 51455221 51455246 -88861519 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 642 297 64 72 chr10 51455246 51455553 -88861212 - L2 LINE L2 -91 3222 2917 181 360 0 0 chr10 51457233 51457283 -88859482 - L3 LINE CR1 -14 1563 1514 458 313 213 11 chr10 51457409 51457761 -88859004 - L2 LINE L2 -4 3309 2887 667 152 76 0 chr10 51457966 51458111 -88858654 + L1MA9 LINE L1 6157 6312 0 1912 159 0 0 chr10 51458606 51458895 -88857870 - AluSx SINE Alu -23 289 1 755 189 8 0 chr10 51459416 51459548 -88857217 - FLAM_C SINE Alu 0 133 1 467 308 76 27 chr10 51460496 51460720 -88856045 - MIR SINE MIR 0 262 28 244 338 80 20 chr10 51460732 51460883 -88855882 + MIR SINE MIR 79 238 -24 266 146 0 18 chr10 51461058 51461113 -88855652 + (TA)n Simple_repeat Simple_repeat 1 54 0 2198 164 28 28 chr10 51461161 51461594 -88855171 - Tigger2a DNA MER2_type 0 434 2 21 0 0 0 chr10 51461976 51461997 -88854768 + AT_rich Low_complexity Low_complexity 1 21 0 498 311 143 5 chr10 51462022 51462231 -88854534 + MIR SINE MIR 25 262 0 264 213 0 80 chr10 51462360 51462435 -88854330 + MIR SINE MIR 124 192 -70 219 180 20 20 chr10 51462960 51463010 -88853755 + GA-rich Low_complexity Low_complexity 1 50 0 306 252 16 16 chr10 51463458 51463563 -88853202 - MIR3 SINE MIR 0 208 104 521 138 73 206 chr10 51463565 51463783 -88852982 + MER5A DNA MER1_type 1 189 0 667 200 131 0 chr10 51464564 51464709 -88852056 + MER69A DNA AcHobo 1 164 -13 320 271 187 13 chr10 51465613 51465768 -88850997 + MIR SINE MIR 68 249 -13 599 266 184 5 chr10 51467279 51467497 -88849268 - MIR SINE MIR -1 261 5 268 335 40 6 chr10 51467793 51467966 -88848799 - L1ME LINE L1 -421 5700 5522 2821 16 0 0 chr10 51469530 51469844 -88846921 + AluYb8 SINE Alu 1 314 -4 466 228 129 45 chr10 51469850 51470074 -88846691 - MER112 DNA MER1_type -17 243 1 18887 101 16 9 chr10 51470082 51472769 -88843996 - Charlie3 DNA MER1_type -4 2706 1 1514 110 26 18 chr10 51472847 51473074 -88843691 - MER30 DNA MER1_type -1 229 1 25 0 0 0 chr10 51474058 51474083 -88842682 + AT_rich Low_complexity Low_complexity 1 25 0 644 281 85 27 chr10 51474473 51474733 -88842032 - Charlie8 DNA MER1_type -2141 276 2 2044 142 19 27 chr10 51475587 51475961 -88840804 + L1PA15 LINE L1 5793 6163 -2 2879 90 21 18 chr10 51477933 51478368 -88838397 + L1P4 LINE L1 5304 5739 -435 476 318 55 31 chr10 51478569 51478824 -88837941 + MIR SINE MIR 2 262 0 21 0 0 0 chr10 51478857 51478878 -88837887 + AT_rich Low_complexity Low_complexity 1 21 0 577 165 28 0 chr10 51480074 51480183 -88836582 - MER58 DNA MER1_type -3 2417 2306 573 204 0 44 chr10 51480909 51480959 -88835806 + Tigger3(Golem) DNA MER2_type 1 52 -2977 3282 129 0 73 chr10 51480959 51481532 -88835233 - LTR26B LTR ERV1 0 531 1 573 204 0 44 chr10 51481532 51481594 -88835171 + Tigger3(Golem) DNA MER2_type 52 108 -2921 * 2210 127 46 55 chr10 51481586 51481864 -88834901 + Tigger3(Golem) DNA MER2_type 2279 2553 -476 615 13 0 0 chr10 51481864 51481941 -88834824 - L1PA3 LINE L1 0 6155 6079 2210 127 46 55 chr10 51481941 51482136 -88834629 + Tigger3(Golem) DNA MER2_type 2553 2748 -281 4673 75 19 0 chr10 51482150 51482778 -88833987 + L1PA10 LINE L1 5529 6168 0 2516 143 18 9 chr10 51482779 51483227 -88833538 - L1MA4A LINE L1 -7 6296 5845 1440 160 128 18 chr10 51484291 51484572 -88832193 - AluJb SINE Alu 0 312 1 441 0 0 0 chr10 51484590 51484639 -88832126 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr10 51484681 51484710 -88832055 + AT_rich Low_complexity Low_complexity 1 29 0 2128 126 0 0 chr10 51484821 51485115 -88831650 - AluSx SINE Alu -18 294 1 406 253 183 58 chr10 51485453 51485710 -88831055 - L2 LINE L2 0 3313 3025 26 0 0 0 chr10 51485865 51485891 -88830874 + AT_rich Low_complexity Low_complexity 1 26 0 194 361 84 12 chr10 51486289 51486372 -88830393 + L2 LINE L2 3118 3206 -66 2747 172 69 60 chr10 51486495 51487273 -88829492 - LTR1 LTR ERV1 0 785 1 2098 73 1 4 chr10 51488207 51488495 -88828270 - L1PA10 LINE L1 -202 5966 5687 189 300 25 117 chr10 51488907 51489027 -88827738 + MIR3 SINE MIR 13 121 -87 408 326 41 14 chr10 51489117 51489338 -88827427 + L2 LINE L2 2393 2619 -695 350 327 75 0 chr10 51490364 51490523 -88826242 - MIR SINE MIR -19 243 73 22 35 0 0 chr10 51491004 51491033 -88825732 + AT_rich Low_complexity Low_complexity 1 29 0 3513 145 2 12 chr10 51491272 51491853 -88824912 + L1PA16 LINE L1 5582 6156 -10 200 227 0 0 chr10 51492946 51492990 -88823775 + (TAA)n Simple_repeat Simple_repeat 2 45 0 449 253 92 29 chr10 51493407 51493581 -88823184 + MIR SINE MIR 8 192 -70 212 286 13 65 chr10 51493849 51493926 -88822839 - L2 LINE L2 -2 3270 3198 221 287 23 69 chr10 51494086 51494173 -88822592 - MER5A DNA MER1_type -40 149 67 2170 123 3 0 chr10 51495060 51495361 -88821404 + AluSx SINE Alu 3 304 -8 202 262 0 0 chr10 51495986 51496028 -88820737 - MIR SINE MIR -116 146 105 190 306 71 24 chr10 51496599 51496684 -88820081 - L2 LINE L2 -1 3312 3224 222 91 0 0 chr10 51496859 51496892 -88819873 + (TG)n Simple_repeat Simple_repeat 1 33 0 331 316 17 34 chr10 51499215 51499332 -88817433 - MER5A DNA MER1_type -73 116 2 2129 127 0 3 chr10 51499448 51499739 -88817026 - AluSx SINE Alu -19 293 4 1477 182 14 30 chr10 51499748 51500044 -88816721 - AluJo SINE Alu -21 291 1 1384 191 0 4 chr10 51500782 51501013 -88815752 + AluJo SINE Alu 2 231 -81 1812 154 4 7 chr10 51501071 51501344 -88815421 + AluSx SINE Alu 9 280 -32 239 0 0 31 chr10 51501344 51501376 -88815389 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 339 337 36 98 chr10 51501424 51501545 -88815220 + L2 LINE L2 3011 3138 -134 2050 108 14 0 chr10 51501545 51501847 -88814918 - AluSg SINE Alu 0 306 1 339 337 36 98 chr10 51501847 51502000 -88814765 + L2 LINE L2 3138 3269 -3 13454 188 57 49 chr10 51504118 51504358 -88812407 - L1MA4A LINE L1 -347 6658 6421 3117 100 10 29 chr10 51504358 51504837 -88811928 + L1PA8 LINE L1 5703 6172 0 13454 188 57 49 chr10 51504837 51511166 -88805599 - L1MA4A LINE L1 -584 6421 37 252 253 80 0 chr10 51511150 51511225 -88805540 - L1M2 LINE L1 -5791 1058 978 * 433 257 101 0 chr10 51511198 51511307 -88805458 + L1M2 LINE L1 1013 1132 -5717 1451 139 61 4 chr10 51511308 51511553 -88805212 + Tigger3(Golem) DNA MER2_type 2779 3037 0 207 162 0 0 chr10 51512221 51512258 -88804507 + (CAT)n Simple_repeat Simple_repeat 3 39 0 562 263 8 8 chr10 51512273 51512406 -88804359 - MIR SINE MIR -23 239 107 216 322 122 0 chr10 51512426 51512516 -88804249 - L2 LINE L2 -529 2785 2685 1873 147 0 27 chr10 51512516 51512849 -88803916 - AluSx SINE Alu 0 325 1 25 0 0 0 chr10 51514088 51514113 -88802652 + AT_rich Low_complexity Low_complexity 1 25 0 653 247 32 26 chr10 51514425 51514615 -88802150 - MIR SINE MIR -13 249 59 291 190 0 0 chr10 51514747 51514805 -88801960 + (TATATG)n Simple_repeat Simple_repeat 4 61 0 314 238 75 0 chr10 51515061 51515141 -88801624 - Charlie1 DNA MER1_type 0 2761 2676 1847 159 0 17 chr10 51516970 51517271 -88799494 - AluJo SINE Alu -10 302 7 326 325 90 10 chr10 51518185 51518385 -88798380 - L3 LINE CR1 -203 1374 1159 1890 168 46 14 chr10 51518586 51518955 -88797810 + L1MA6 LINE L1 5898 6278 -22 2012 138 3 0 chr10 51518967 51519275 -88797490 + AluSx SINE Alu 1 309 0 545 237 80 27 chr10 51519276 51519500 -88797265 + L1MB7 LINE L1 5949 6184 0 268 332 196 36 chr10 51520706 51521043 -88795722 - L2 LINE L2 0 3272 2882 305 208 188 20 chr10 51521473 51521574 -88795191 + MIR SINE MIR 125 242 -20 398 126 32 21 chr10 51521607 51521702 -88795063 + CT-rich Low_complexity Low_complexity 1 96 0 1704 176 58 0 chr10 51521962 51522240 -88794525 - AluSx SINE Alu -18 294 1 968 203 16 26 chr10 51522881 51523073 -88793692 + MER20 DNA MER1_type 30 219 0 1499 161 29 7 chr10 51524156 51524466 -88792299 - MER33 DNA MER1_type -1 323 7 220 228 44 9 chr10 51524604 51524718 -88792047 + GA-rich Low_complexity Low_complexity 5 122 0 212 196 0 18 chr10 51524760 51524816 -88791949 + T-rich Low_complexity Low_complexity 3 57 0 283 257 10 69 chr10 51524841 51524942 -88791823 + L2 LINE L2 3219 3313 0 432 0 0 0 chr10 51525404 51525452 -88791313 + (T)n Simple_repeat Simple_repeat 1 48 0 1106 107 0 0 chr10 51526979 51527128 -88789637 + AluY SINE Alu 1 149 -162 21 0 0 0 chr10 51528306 51528327 -88788438 + AT_rich Low_complexity Low_complexity 1 21 0 888 234 34 10 chr10 51528632 51528841 -88787924 + MIR SINE MIR 18 231 -31 602 221 68 6 chr10 51529951 51530114 -88786651 + FAM SINE Alu 1 173 -2 4237 146 53 26 chr10 51530115 51530958 -88785807 - Ricksha DNA DNA -169 3082 2217 861 161 28 28 chr10 51530959 51531139 -88785626 + AluSx SINE Alu 1 180 -132 868 218 86 23 chr10 51533419 51533676 -88783089 - MLT1B LTR MaLR -3 387 115 6886 52 9 0 chr10 51533989 51534848 -88781917 + L1PA6 LINE L1 5273 6139 -15 240 286 16 0 chr10 51535293 51535356 -88781409 - L2 LINE L2 -4 3268 3205 274 305 68 62 chr10 51536419 51536596 -88780169 + HsTC2 DNA Tc2 671 848 -1050 460 245 256 42 chr10 51536967 51537433 -88779332 + L2 LINE L2 2708 3276 -37 495 333 61 43 chr10 51537438 51537832 -88778933 + L1MEd LINE L1 152 552 -5567 441 0 0 0 chr10 51538349 51538398 -88778367 + (T)n Simple_repeat Simple_repeat 1 49 0 1440 160 128 18 chr10 51539065 51539346 -88777419 - AluJb SINE Alu 0 312 1 441 0 0 0 chr10 51539364 51539413 -88777352 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr10 51539455 51539484 -88777281 + AT_rich Low_complexity Low_complexity 1 29 0 801 195 25 42 chr10 51539623 51539859 -88776906 - L1MC1 LINE L1 -15 6318 6087 253 286 83 0 chr10 51540358 51540442 -88776323 + MER112 DNA MER1_type 2 92 -168 2157 99 44 0 chr10 51540651 51540945 -88775820 + AluSq SINE Alu 1 307 -6 27 92 0 0 chr10 51541466 51541542 -88775223 + AT_rich Low_complexity Low_complexity 1 76 0 282 321 19 19 chr10 51541841 51541947 -88774818 - MIR SINE MIR -151 111 6 329 0 24 0 chr10 51544262 51544303 -88772462 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2169 123 25 27 chr10 51544328 51544693 -88772072 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr10 51544948 51544968 -88771797 + (A)n Simple_repeat Simple_repeat 1 20 0 1315 170 17 4 chr10 51545157 51545387 -88771378 - AluJb SINE Alu -79 233 1 22 0 0 0 chr10 51545387 51545409 -88771356 + AT_rich Low_complexity Low_complexity 1 22 0 2561 201 112 10 chr10 51545468 51546079 -88770686 - L1MB8 LINE L1 0 6178 5490 2556 130 71 48 chr10 51546079 51546555 -88770210 + LTR45B LTR ERV1 3 489 0 2561 201 112 10 chr10 51546555 51546621 -88770144 - L1MB8 LINE L1 -688 5490 5432 425 175 272 0 chr10 51546621 51546767 -88769998 - AluSg/x SINE Alu 0 311 135 485 165 19 0 chr10 51546767 51546870 -88769895 - L1MB8 LINE L1 -743 5441 5337 281 150 33 0 chr10 51547207 51547267 -88769498 + AluSc SINE Alu 236 297 -2 225 341 100 45 chr10 51547376 51547596 -88769169 - L2 LINE L2 -214 3058 2827 939 188 15 25 chr10 51547714 51547911 -88768854 - MER20 DNA MER1_type -22 197 3 276 30 0 0 chr10 51549207 51549240 -88767525 + (TG)n Simple_repeat Simple_repeat 2 34 0 275 315 41 27 chr10 51549903 51550049 -88766716 - MIR SINE MIR -79 183 36 1487 199 6 16 chr10 51550554 51550865 -88765900 - Ricksha DNA DNA -1749 1497 1190 2354 134 113 0 chr10 51550872 51551306 -88765459 - Ricksha DNA DNA -2750 496 14 4500 95 8 3 chr10 51551328 51551951 -88764814 - L1PA7 LINE L1 0 6154 5529 937 123 72 41 chr10 51551965 51552160 -88764605 - Tigger3(Golem) DNA MER2_type -281 2748 2548 612 0 0 0 chr10 51552160 51552233 -88764532 + L1PA3 LINE L1 6079 6151 -4 4478 118 54 8 chr10 51552343 51553120 -88763645 + L1MA7 LINE L1 5479 6291 0 467 97 0 0 chr10 51553846 51553908 -88762857 + Alu SINE Alu 1 62 -256 245 294 0 33 chr10 51554285 51554377 -88762388 + MARNA DNA Mariner 105 193 -393 404 340 51 16 chr10 51554448 51554662 -88762103 - MARNA DNA Mariner -227 359 129 1725 173 10 10 chr10 51554662 51554957 -88761808 + AluSx SINE Alu 1 295 -17 404 340 51 16 chr10 51554957 51555057 -88761708 - MARNA DNA Mariner -457 129 34 480 166 331 28 chr10 51555673 51555818 -88760947 + MER5A DNA MER1_type 1 189 0 520 153 36 9 chr10 51559019 51559130 -88757635 + L1MD3 LINE L1 7874 7987 -8 358 258 32 85 chr10 51559143 51559391 -88757374 - L2 LINE L2 -612 2702 2468 327 416 22 0 chr10 51559419 51559604 -88757161 + L2 LINE L2 2689 2877 -437 1707 161 9 43 chr10 51560230 51560553 -88756212 + AluJb SINE Alu 1 312 0 231 285 53 0 chr10 51561526 51561677 -88755088 + (CCTG)n Simple_repeat Simple_repeat 1 159 0 291 252 12 27 chr10 51564257 51564365 -88752400 - MIR SINE MIR -82 126 25 493 263 215 14 chr10 51615559 51615768 -88700997 + MIR SINE MIR 2 252 -10 4308 112 25 57 chr10 51615874 51616591 -88700174 + HSMAR1 DNA Mariner 1 694 -593 4140 246 18 23 chr10 51617093 51618490 -88698275 + L1PA15-16 LINE L1 1736 3125 -3724 3037 88 10 2 chr10 51618633 51619051 -88697714 - L1PA13 LINE L1 -23 6140 5720 1789 168 98 2 chr10 51619035 51619434 -88697331 - L1 LINE L1 -1638 4508 4072 * 4256 48 4 0 chr10 51619434 51619959 -88696806 - L1PA5 LINE L1 -2 6152 5626 432 316 14 0 chr10 51621514 51621653 -88695112 - MIR SINE MIR -66 196 56 612 311 80 0 chr10 51623008 51623220 -88693545 - MIR SINE MIR -14 248 20 414 318 84 0 chr10 51623717 51623896 -88692869 + MIR SINE MIR 20 213 -49 4879 168 30 23 chr10 51623909 51624093 -88692672 + L1MA8 LINE L1 5023 5204 -1087 2251 103 0 13 chr10 51624093 51624405 -88692360 + AluSg SINE Alu 1 308 -2 4879 168 30 23 chr10 51624405 51625252 -88691513 + L1MA8 LINE L1 5204 6062 -229 2414 82 0 0 chr10 51625252 51625556 -88691209 + AluSc SINE Alu 1 304 -5 4879 168 30 23 chr10 51625556 51625761 -88691004 + L1MA8 LINE L1 6062 6264 -27 353 215 0 11 chr10 51625774 51625867 -88690898 - L1M4 LINE L1 -1875 4271 4180 205 314 0 0 chr10 51625867 51625918 -88690847 + polypyrimidine Low_complexity Low_complexity 5 55 0 675 295 39 28 chr10 51625918 51626274 -88690491 - L1M4 LINE L1 -1955 4191 3832 331 309 34 13 chr10 51626559 51626708 -88690057 - L1MEd LINE L1 -5965 154 3 21 0 0 0 chr10 51626708 51626729 -88690036 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 51626817 51626854 -88689911 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr10 51627843 51627873 -88688892 + AT_rich Low_complexity Low_complexity 1 30 0 1255 157 30 17 chr10 51629085 51629315 -88687450 - L1MA7 LINE L1 -254 6037 5805 1239 131 49 22 chr10 51629690 51629957 -88686808 + L1MA9 LINE L1 6032 6305 -7 183 235 0 0 chr10 51630877 51630928 -88685837 + CT-rich Low_complexity Low_complexity 4 54 0 185 369 24 0 chr10 51632521 51632605 -88684160 - L2 LINE L2 0 3272 3187 725 280 80 9 chr10 51632809 51633034 -88683731 + MIR SINE MIR 9 249 -13 912 169 6 6 chr10 51633747 51633907 -88682858 + FRAM SINE Alu 5 164 -2 751 152 21 35 chr10 51634214 51634359 -88682406 - FLAM_C SINE Alu 0 143 1 413 70 0 0 chr10 51634976 51635033 -88681732 + L1PA13 LINE L1 1541 1597 -5190 42591 39 0 2 chr10 51635134 51641103 -88675662 + L1PA3 LINE L1 197 6152 -3 289 219 41 0 chr10 51641417 51641490 -88675275 + HsTC2 DNA Tc2 5 80 -1818 25 31 0 0 chr10 51642948 51642980 -88673785 + AT_rich Low_complexity Low_complexity 1 32 0 21 82 0 0 chr10 51643620 51643669 -88673096 + AT_rich Low_complexity Low_complexity 1 49 0 500 306 6 45 chr10 51643680 51643837 -88672928 - MIR SINE MIR -81 181 31 3644 155 95 12 chr10 51644129 51644780 -88671985 - MER44D DNA MER2_type 0 705 1 24 0 0 0 chr10 51645125 51645149 -88671616 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr10 51645725 51645754 -88671011 + AT_rich Low_complexity Low_complexity 1 29 0 234 350 189 20 chr10 51646365 51646925 -88669840 - L2 LINE L2 -834 2480 1826 498 290 90 35 chr10 51647813 51648013 -88668752 + MLT1I LTR MaLR 199 409 0 267 218 115 13 chr10 51648721 51648799 -88667966 - MIR SINE MIR -65 197 112 230 173 182 73 chr10 51649175 51649285 -88667480 + Charlie8 DNA MER1_type 117 238 -2179 276 331 83 0 chr10 51649992 51650113 -88666652 + MIR SINE MIR 132 262 0 297 243 0 27 chr10 51650917 51650991 -88665774 + MIR3 SINE MIR 124 195 -13 637 235 0 8 chr10 51651002 51651134 -88665631 - FLAM_C SINE Alu -2 131 1 2008 130 26 13 chr10 51651675 51651983 -88664782 + AluSx SINE Alu 1 312 0 1604 160 35 9 chr10 51652052 51652370 -88664395 - L1MB3 LINE L1 -10 6173 5848 264 104 55 43 chr10 51652370 51652440 -88664325 + L1MB3 LINE L1 5808 5874 -309 2168 128 0 0 chr10 51652815 51653119 -88663646 + AluSx SINE Alu 1 304 -8 205 250 0 0 chr10 51655053 51655101 -88661664 + (TG)n Simple_repeat Simple_repeat 1 48 0 234 277 10 69 chr10 51655155 51655181 -88661584 + MER5A DNA MER1_type 66 92 -97 2051 136 38 49 chr10 51655181 51655549 -88661216 - THE1B LTR MaLR 0 364 1 234 277 10 69 chr10 51655549 51655623 -88661142 + MER5A DNA MER1_type 92 160 -29 226 214 0 0 chr10 51656653 51656695 -88660070 - MIR SINE MIR -22 240 199 24 0 0 0 chr10 51656698 51656722 -88660043 + AT_rich Low_complexity Low_complexity 1 24 0 755 211 6 19 chr10 51656723 51656884 -88659881 + L1MCa LINE L1 164 322 -6242 2015 243 73 75 chr10 51656887 51657877 -88658888 + L1MCa LINE L1 287 1298 -4868 2594 166 9 49 chr10 51658155 51658726 -88658039 + L1 LINE L1 4615 5162 -984 281 350 46 61 chr10 51659037 51659448 -88657317 + L2 LINE L2 2568 2972 -342 377 256 67 89 chr10 51659533 51660049 -88656716 + L1ME LINE L1 5033 5543 -627 223 152 88 102 chr10 51660908 51661021 -88655744 - MIR SINE MIR -67 141 30 23 0 0 0 chr10 51661427 51661450 -88655315 + AT_rich Low_complexity Low_complexity 1 23 0 2128 198 24 5 chr10 51662298 51662708 -88654057 + MER47B DNA MER2_type 1 418 0 243 65 0 0 chr10 51662710 51662741 -88654024 + MLT1A2 LTR MaLR 344 374 0 18449 184 32 22 chr10 51664603 51665712 -88651053 + L1PA13 LINE L1 123 1220 -5594 216 0 0 0 chr10 51665712 51665736 -88651029 + (CTG)n Simple_repeat Simple_repeat 1 24 0 18449 184 32 22 chr10 51665736 51666905 -88649860 + L1PA13 LINE L1 1220 2376 -4438 1937 148 3 13 chr10 51666905 51667227 -88649538 - AluSx SINE Alu 0 312 1 18449 184 32 22 chr10 51667227 51671566 -88645199 + L1PA13 LINE L1 2376 6813 -1 4359 185 47 8 chr10 51671752 51672848 -88643917 - L1MB7 LINE L1 -15 6169 5021 323 293 122 44 chr10 51673259 51673464 -88643301 + MIR SINE MIR 29 249 -13 499 301 37 64 chr10 51674230 51674379 -88642386 + MLT1L LTR MaLR 4 143 -472 1345 256 37 0 chr10 51674379 51674707 -88642058 - MER58B DNA MER1_type 0 341 2 499 301 37 64 chr10 51674707 51674853 -88641912 + MLT1L LTR MaLR 143 291 -324 22 70 0 0 chr10 51677312 51677355 -88639410 + AT_rich Low_complexity Low_complexity 1 43 0 1046 291 123 14 chr10 51677357 51677803 -88638962 - L1ME3A LINE L1 -30 6140 5646 390 74 12 80 chr10 51677807 51677970 -88638795 + (TA)n Simple_repeat Simple_repeat 2 153 0 26 0 0 0 chr10 51678063 51678089 -88638676 + AT_rich Low_complexity Low_complexity 1 26 0 296 277 0 0 chr10 51678089 51678172 -88638593 + L1MC5 LINE L1 7830 7912 -49 1128 208 38 109 chr10 51678208 51678605 -88638160 + L1MC4 LINE L1 7530 7830 -165 312 27 0 0 chr10 51678605 51678642 -88638123 + (TG)n Simple_repeat Simple_repeat 1 37 0 1128 208 38 109 chr10 51678642 51678798 -88637967 + L1MC4 LINE L1 7830 7995 0 712 271 29 35 chr10 51678799 51679113 -88637652 - L1ME3A LINE L1 -593 5569 5258 343 260 99 42 chr10 51679541 51679733 -88637032 + MER112 DNA MER1_type 11 213 -47 2191 113 7 10 chr10 51679858 51680178 -88636587 - AluSg SINE Alu 0 321 3 273 179 134 0 chr10 51680528 51680595 -88636170 - MER5A DNA MER1_type -77 112 37 6217 43 1 1 chr10 51681150 51681913 -88634852 - L1PA5 LINE L1 -2 6152 5390 1781 236 87 23 chr10 51682845 51683292 -88633473 + MER114 LTR ERV 1 499 -149 2215 107 14 6 chr10 51683292 51683638 -88633127 + L1PA13 LINE L1 5810 6158 -5 1781 236 87 23 chr10 51683638 51683799 -88632966 + MER114 LTR ERV 499 648 0 1978 202 104 7 chr10 51684381 51684841 -88631924 + MLT1D LTR MaLR 1 505 0 1500 122 57 4 chr10 51684978 51685207 -88631558 + AluSq SINE Alu 6 246 -67 234 135 27 0 chr10 51685340 51685377 -88631388 + AluSq SINE Alu 251 288 -14 29 60 0 0 chr10 51685377 51685427 -88631338 + AT_rich Low_complexity Low_complexity 1 50 0 219 69 0 0 chr10 51686349 51686378 -88630387 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 230 349 12 0 chr10 51686493 51686579 -88630186 - MIR SINE MIR -168 94 8 208 284 0 45 chr10 51686588 51686655 -88630110 - MIR SINE MIR -184 78 15 21 36 0 0 chr10 51686889 51686917 -88629848 + AT_rich Low_complexity Low_complexity 1 28 0 384 165 25 51 chr10 51687399 51687478 -88629287 + Tigger2 DNA MER2_type 1 77 -2641 870 191 39 22 chr10 51687503 51687681 -88629084 - MER8 DNA MER2_type -58 181 1 21 71 0 0 chr10 51688398 51688440 -88628325 + AT_rich Low_complexity Low_complexity 1 42 0 229 333 0 25 chr10 51689493 51689574 -88627191 + L2 LINE L2 2977 3055 -217 428 313 123 6 chr10 51689728 51689907 -88626858 + MIR SINE MIR 37 236 -26 295 274 47 28 chr10 51689909 51690015 -88626750 + MIR3 SINE MIR 97 204 -4 24 32 0 0 chr10 51690149 51690180 -88626585 + AT_rich Low_complexity Low_complexity 1 31 0 1584 197 26 3 chr10 51691257 51691561 -88625204 + AluJo SINE Alu 1 311 -1 192 194 14 28 chr10 51691683 51691755 -88625010 + CT-rich Low_complexity Low_complexity 5 75 0 417 189 18 9 chr10 51691979 51692090 -88624675 + GA-rich Low_complexity Low_complexity 1 112 0 25 65 0 0 chr10 51692644 51692690 -88624075 + AT_rich Low_complexity Low_complexity 1 46 0 340 249 24 101 chr10 51694031 51694200 -88622565 + L1MC5 LINE L1 7756 7911 -50 344 183 19 67 chr10 51695358 51695462 -88621303 - L2 LINE L2 -3 3310 3212 216 291 93 23 chr10 51696079 51696165 -88620600 - L2 LINE L2 0 3272 3181 444 319 44 25 chr10 51696189 51696349 -88620416 - MIR3 SINE MIR -28 180 18 595 258 58 104 chr10 51696418 51696678 -88620087 - MIR SINE MIR 0 262 15 337 273 53 45 chr10 51696683 51696815 -88619950 - MER5A DNA MER1_type -1 188 56 1423 211 42 0 chr10 51696900 51697208 -88619557 - MER58B DNA MER1_type -1 340 20 21 0 0 0 chr10 51697479 51697500 -88619265 + AT_rich Low_complexity Low_complexity 1 21 0 1070 221 139 37 chr10 51697778 51698318 -88618447 + LTR27 LTR ERV1 3 661 -142 908 222 13 39 chr10 51698296 51698597 -88618168 + LTR28 LTR ERV1 686 1020 0 * 191 242 343 10 chr10 51698993 51699092 -88617673 - L3 LINE CR1 -115 1462 1331 743 171 0 0 chr10 51699551 51699701 -88617064 - FLAM_C SINE Alu 0 150 1 372 59 0 0 chr10 51700468 51700519 -88616246 + (CA)n Simple_repeat Simple_repeat 2 52 0 307 261 26 43 chr10 51700959 51701074 -88615691 + L1 LINE L1 4365 4477 -1669 184 312 112 8 chr10 51701135 51701260 -88615505 + L2 LINE L2 566 703 -2611 7103 232 53 16 chr10 51701486 51701664 -88615101 + L1MCa LINE L1 1726 1896 -4530 1806 166 17 3 chr10 51701664 51701953 -88614812 + AluJb SINE Alu 1 293 -19 7103 232 53 16 chr10 51701953 51704617 -88612148 + L1MCa LINE L1 1896 4675 -1751 1674 129 29 53 chr10 51704637 51704978 -88611787 + L1MC2 LINE L1 5997 6329 -15 534 281 0 8 chr10 51705018 51705139 -88611626 - MIR SINE MIR -86 176 57 244 246 0 0 chr10 51705186 51705243 -88611522 + (TA)n Simple_repeat Simple_repeat 1 57 0 218 247 100 140 chr10 51705853 51706003 -88610762 - L2 LINE L2 -8 3264 3121 22 0 0 0 chr10 51706306 51706328 -88610437 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr10 51707431 51707456 -88609309 + AT_rich Low_complexity Low_complexity 1 25 0 267 339 195 9 chr10 51707555 51707776 -88608989 + MIR SINE MIR 1 262 0 4064 192 45 19 chr10 51708303 51708450 -88608315 - L1MB7 LINE L1 0 6184 6042 2168 126 0 3 chr10 51708450 51708751 -88608014 - AluSx SINE Alu -12 300 1 4064 192 45 19 chr10 51708751 51709145 -88607620 - L1MB7 LINE L1 -142 6042 5660 3970 89 2 16 chr10 51709145 51709706 -88607059 - MER41A LTR ERV1 -1 553 1 4064 192 45 19 chr10 51709706 51710112 -88606653 - L1MB7 LINE L1 -524 5660 5212 258 32 0 0 chr10 51710220 51710251 -88606514 + (CA)n Simple_repeat Simple_repeat 2 32 0 1362 146 54 8 chr10 51712320 51712559 -88604206 + L1PA16 LINE L1 5905 6154 -12 2072 139 0 0 chr10 51712562 51712863 -88603902 + AluSx SINE Alu 5 305 -7 23 0 0 0 chr10 51713050 51713073 -88603692 + AT_rich Low_complexity Low_complexity 1 23 0 605 332 244 4 chr10 51713306 51713883 -88602882 + L2 LINE L2 2592 3312 -1 1010 298 29 3 chr10 51714847 51715156 -88601609 + L2 LINE L2 882 1198 -2116 1802 164 17 101 chr10 51715166 51715642 -88601123 + MER67D LTR ERV1 1 436 -78 251 264 0 0 chr10 51715648 51715701 -88601064 + L2 LINE L2 1218 1270 -2044 436 244 42 0 chr10 51715701 51715820 -88600945 + L2 LINE L2 1386 1509 -1805 207 0 0 0 chr10 51716151 51716174 -88600591 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 856 281 91 104 chr10 51716562 51716757 -88600008 + L2 LINE L2 2353 2549 -765 2266 95 0 7 chr10 51716757 51717052 -88599713 + AluSg SINE Alu 1 293 -17 856 281 91 104 chr10 51717052 51717403 -88599362 + L2 LINE L2 2549 2892 -422 283 146 0 18 chr10 51717418 51717473 -88599292 + LTR48 LTR ERV1 694 747 -40 187 258 182 0 chr10 51718520 51718586 -88598179 + MIR SINE MIR 20 97 -165 5299 120 29 55 chr10 51718586 51719508 -88597257 + MER4D LTR ERV1 1 898 -5 294 284 9 46 chr10 51719796 51719905 -88596860 + L2 LINE L2 3150 3254 -59 23 33 0 0 chr10 51720154 51720184 -88596581 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 51721415 51721445 -88595320 + AT_rich Low_complexity Low_complexity 1 30 0 468 300 67 7 chr10 51721772 51721922 -88594843 - MIR SINE MIR -18 244 86 262 260 73 0 chr10 51722284 51722380 -88594385 - L1MC4 LINE L1 -131 7911 7809 367 249 88 95 chr10 51722547 51722852 -88593913 - L1MC4 LINE L1 -215 7827 7525 9089 197 58 63 chr10 51723008 51723554 -88593211 + Charlie1 DNA MER1_type 1 548 -2213 2262 115 3 6 chr10 51723554 51723868 -88592897 + AluSp SINE Alu 1 313 0 9089 197 58 63 chr10 51723868 51723990 -88592775 + Charlie1 DNA MER1_type 548 669 -2092 301 146 0 0 chr10 51723990 51724045 -88592720 + L1MA4A LINE L1 6238 6292 -11 9089 197 58 63 chr10 51724045 51725811 -88590954 + Charlie1 DNA MER1_type 669 2442 -319 2158 182 41 7 chr10 51725811 51726223 -88590542 - MSTB LTR MaLR 0 426 1 9089 197 58 63 chr10 51726223 51726276 -88590489 + Charlie1 DNA MER1_type 2442 2494 -267 222 37 0 0 chr10 51726276 51726303 -88590462 + (TA)n Simple_repeat Simple_repeat 2 28 0 1654 135 42 8 chr10 51726303 51726562 -88590203 - AluSx SINE Alu -17 295 28 9089 197 58 63 chr10 51726562 51726767 -88589998 + Charlie1 DNA MER1_type 2492 2684 -77 22 25 0 25 chr10 51727117 51727137 -88589628 + AT_rich Low_complexity Low_complexity 1 20 -19 1467 188 64 25 chr10 51727137 51727419 -88589346 - AluJb SINE Alu -19 293 1 22 25 0 25 chr10 51727419 51727438 -88589327 + AT_rich Low_complexity Low_complexity 20 39 0 1391 271 63 69 chr10 51727465 51728332 -88588433 - L2 LINE L2 0 3313 2454 21 36 0 0 chr10 51728350 51728378 -88588387 + AT_rich Low_complexity Low_complexity 1 28 0 191 284 45 90 chr10 51728883 51729038 -88587727 + L2 LINE L2 2611 2758 -556 302 350 33 25 chr10 51729172 51729292 -88587473 + MIR SINE MIR 3 123 -139 305 60 0 40 chr10 51729306 51729356 -88587409 - AluJo SINE Alu 0 302 255 1054 185 5 21 chr10 51729356 51729545 -88587220 - AluJo SINE Alu -126 186 1 291 350 49 0 chr10 51729545 51729668 -88587097 + MIR SINE MIR 120 248 -14 356 323 99 31 chr10 51730423 51730615 -88586150 - MER115 DNA AcHobo -341 352 148 1574 176 72 0 chr10 51731391 51731710 -88585055 - L1MB3 LINE L1 0 6183 5842 456 304 99 0 chr10 51732116 51732297 -88584468 + MIR SINE MIR 50 248 -14 456 301 40 35 chr10 51732430 51732603 -88584162 + MER91A DNA MER1_type 1 174 -22 459 276 56 0 chr10 51733164 51733316 -88583449 - MER20B DNA MER1_type 0 219 58 847 224 78 24 chr10 51734124 51734329 -88582436 + MER58A DNA MER1_type 5 220 -4 189 263 70 35 chr10 51734370 51734427 -88582338 + L2 LINE L2 3208 3266 -6 1634 187 3 11 chr10 51734708 51734992 -88581773 - AluJo SINE Alu -30 282 1 1991 142 0 0 chr10 51735017 51735298 -88581467 - AluSx SINE Alu -31 281 1 7353 41 5 0 chr10 51735730 51736910 -88579855 + L1PA5 LINE L1 4971 6154 0 338 330 20 0 chr10 51737006 51737106 -88579659 + MIR SINE MIR 53 154 -108 238 328 57 68 chr10 51737112 51737304 -88579461 - MIR SINE MIR -58 204 15 1547 167 33 38 chr10 51737749 51738115 -88578650 - L1MA10 LINE L1 0 6334 5971 2327 182 11 54 chr10 51738129 51738662 -88578103 + L1MB1 LINE L1 5254 5763 -405 1783 164 7 0 chr10 51738686 51738972 -88577793 + AluSx SINE Alu 1 288 -24 693 279 42 5 chr10 51738995 51739211 -88577554 - MER8 DNA MER2_type 0 345 1 759 206 29 6 chr10 51739215 51739385 -88577380 + L1MB1 LINE L1 5788 5961 -228 23 68 0 0 chr10 51739674 51739718 -88577047 + AT_rich Low_complexity Low_complexity 1 44 0 930 192 7 0 chr10 51739782 51739933 -88576832 + FRAM SINE Alu 1 152 -14 204 291 126 19 chr10 51740624 51740727 -88576038 + MIR SINE MIR 66 179 -83 * 361 232 30 154 chr10 51740699 51740932 -88575833 - MIR SINE MIR 0 262 59 412 304 14 7 chr10 51741039 51741177 -88575588 + MLT1H1 LTR MaLR 3 141 -414 254 253 163 9 chr10 51741330 51741439 -88575326 + MLT1H LTR MaLR 436 522 -27 2703 29 3 0 chr10 51741496 51741806 -88574959 - AluY SINE Alu 0 311 1 186 43 0 0 chr10 51741922 51741945 -88574820 + (T)n Simple_repeat Simple_repeat 1 23 0 2388 172 31 79 chr10 51742526 51743072 -88573693 - MLT2B1 LTR ERVL 0 520 1 956 242 104 48 chr10 51744292 51744734 -88572031 + MLT1H LTR MaLR 83 549 0 318 312 94 45 chr10 51744741 51744921 -88571844 + L2 LINE L2 2800 2986 -286 212 300 17 0 chr10 51745086 51745146 -88571619 + L2 LINE L2 3252 3312 -1 223 355 64 0 chr10 51745942 51746052 -88570713 + MER91C DNA MER1_type 20 136 -4 273 210 0 0 chr10 51747703 51747765 -88569000 + (CATA)n Simple_repeat Simple_repeat 2 63 0 24 67 0 0 chr10 51747768 51747813 -88568952 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr10 51747875 51747897 -88568868 + AT_rich Low_complexity Low_complexity 1 22 0 350 185 172 56 chr10 51748742 51748836 -88567929 + FLAM_A SINE Alu 8 101 -32 1427 284 104 2 chr10 51748917 51749360 -88567405 - LTR16C LTR ERVL 0 491 4 189 0 0 0 chr10 51749726 51749747 -88567018 + (TG)n Simple_repeat Simple_repeat 2 22 0 235 161 16 16 chr10 51750007 51750069 -88566696 + GA-rich Low_complexity Low_complexity 2 63 0 21 36 0 0 chr10 51750285 51750313 -88566452 + AT_rich Low_complexity Low_complexity 1 28 0 686 185 8 0 chr10 51750400 51750519 -88566246 + FLAM_A SINE Alu 1 120 -13 186 189 0 0 chr10 51750519 51750556 -88566209 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 257 229 133 24 chr10 51750986 51751069 -88565696 + L2 LINE L2 3207 3298 -15 410 235 73 52 chr10 51751076 51751212 -88565553 - MIR SINE MIR -67 195 57 2231 107 0 3 chr10 51752142 51752442 -88564323 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 51752443 51752473 -88564292 + AT_rich Low_complexity Low_complexity 1 30 0 35 24 0 0 chr10 51753013 51753055 -88563710 + AT_rich Low_complexity Low_complexity 1 42 0 249 152 182 0 chr10 51753103 51753169 -88563596 + MER116 DNA Mariner 2 79 -1 599 289 51 20 chr10 51753578 51753775 -88562990 - MIR SINE MIR -18 244 42 1802 283 84 34 chr10 51753911 51754551 -88562214 - MER45C DNA AcHobo -8 945 274 281 281 56 0 chr10 51754630 51754719 -88562046 - MER45C DNA AcHobo -787 166 73 23 78 0 0 chr10 51757474 51757525 -88559240 + AT_rich Low_complexity Low_complexity 1 51 0 295 383 97 23 chr10 51758277 51758847 -88557918 + L2 LINE L2 2366 2977 -337 24 91 0 0 chr10 51759751 51759817 -88556948 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr10 51760087 51760122 -88556643 + AT_rich Low_complexity Low_complexity 1 35 0 407 283 18 9 chr10 51761812 51761925 -88554840 - MER81 DNA DNA 0 114 1 877 204 74 22 chr10 51762148 51762466 -88554299 - MSTD LTR MaLR -2 394 1 212 232 71 0 chr10 51763071 51763127 -88553638 - MIR SINE MIR -18 244 185 915 259 68 124 chr10 51763186 51764181 -88552584 + MER52A LTR ERV1 660 1755 0 369 278 172 38 chr10 51764765 51764974 -88551791 + MIR SINE MIR 15 251 -11 1110 294 30 30 chr10 51765379 51765780 -88550985 + MLT1I LTR MaLR 5 405 -4 272 290 37 89 chr10 51765793 51766007 -88550758 + MIR SINE MIR 15 217 -45 210 171 0 0 chr10 51766419 51766460 -88550305 + T-rich Low_complexity Low_complexity 1 41 0 222 244 0 0 chr10 51767257 51767302 -88549463 + L2 LINE L2 3216 3260 -12 444 30 91 0 chr10 51767537 51767636 -88549129 + (TA)n Simple_repeat Simple_repeat 1 108 0 526 56 74 0 chr10 51767743 51767851 -88548914 + (TA)n Simple_repeat Simple_repeat 2 117 0 2386 77 3 6 chr10 51768909 51769221 -88547544 - AluY SINE Alu 0 311 1 598 297 0 47 chr10 51769226 51769438 -88547327 - MIR SINE MIR -19 243 42 1878 182 82 53 chr10 51769582 51770072 -88546693 + MLT1D LTR MaLR 2 505 0 233 235 206 0 chr10 51770169 51770237 -88546528 - MER81 DNA DNA -32 82 1 21 36 0 0 chr10 51771065 51771093 -88545672 + AT_rich Low_complexity Low_complexity 1 28 0 294 224 133 99 chr10 51771158 51771452 -88545313 - L1MC4a LINE L1 -98 6023 5718 213 309 0 0 chr10 51772635 51772690 -88544075 + L2 LINE L2 3255 3309 -4 229 302 58 12 chr10 51773295 51773381 -88543384 + MIR SINE MIR 23 112 -150 180 0 0 0 chr10 51773509 51773529 -88543236 + (TC)n Simple_repeat Simple_repeat 2 21 0 246 156 0 0 chr10 51773530 51773575 -88543190 + (TG)n Simple_repeat Simple_repeat 2 46 0 196 194 0 32 chr10 51773737 51773799 -88542966 + (TA)n Simple_repeat Simple_repeat 1 60 0 266 179 39 13 chr10 51773820 51773898 -88542867 + (TA)n Simple_repeat Simple_repeat 1 80 0 443 286 13 13 chr10 51773997 51774151 -88542614 - MER117 DNA MER1_type 0 197 44 783 181 5 85 chr10 51774515 51774714 -88542051 - MER20 DNA MER1_type -1 218 36 228 243 108 36 chr10 51774740 51774851 -88541914 - L1MC4a LINE L1 -1785 6023 5905 1435 255 99 23 chr10 51774863 51775470 -88541295 - L1MC4a LINE L1 -801 5345 5175 255 61 0 0 chr10 51775482 51775515 -88541250 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 2102 134 0 0 chr10 51775528 51775818 -88540947 + AluSq SINE Alu 1 290 -23 325 341 45 27 chr10 51775857 51776080 -88540685 - L1MC4a LINE L1 -1038 5108 4882 283 228 13 51 chr10 51776105 51776184 -88540581 + MER69 DNA AcHobo 2451 2526 0 25 75 0 0 chr10 51776222 51776275 -88540490 + AT_rich Low_complexity Low_complexity 1 53 0 215 343 29 43 chr10 51776648 51776788 -88539977 - MIR SINE MIR -115 147 10 646 221 8 0 chr10 51777209 51777331 -88539434 + AluJb SINE Alu 12 134 -178 354 61 0 0 chr10 51777336 51777385 -88539380 + (CA)n Simple_repeat Simple_repeat 2 50 0 575 188 70 31 chr10 51778128 51778276 -88538489 - FLAM_A SINE Alu 0 153 1 32 43 0 0 chr10 51778428 51778474 -88538291 + AT_rich Low_complexity Low_complexity 1 46 0 374 317 59 27 chr10 51778810 51778996 -88537769 - MIR3 SINE MIR -6 202 11 293 302 108 36 chr10 51780432 51780571 -88536194 - MIR SINE MIR -71 191 43 249 263 0 13 chr10 51781673 51781749 -88535016 + HsTC2 DNA Tc2 1 75 -1823 740 108 9 0 chr10 51782804 51782915 -88533850 + AluSc SINE Alu 194 305 -4 24 0 0 0 chr10 51782924 51782948 -88533817 + AT_rich Low_complexity Low_complexity 1 24 0 218 173 0 19 chr10 51783291 51783343 -88533422 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 198 303 0 0 chr10 51783795 51783861 -88532904 + MIR SINE MIR 153 218 -44 2032 141 0 0 chr10 51784023 51784320 -88532445 + AluSx SINE Alu 1 297 -15 457 337 28 87 chr10 51784485 51784773 -88531992 + L2 LINE L2 3001 3271 -1 342 331 136 0 chr10 51784873 51785027 -88531738 + L3 LINE CR1 1399 1573 -4 1856 140 4 4 chr10 51785163 51785488 -88531277 + AluSx SINE Alu 4 328 0 245 356 128 61 chr10 51788479 51788886 -88527879 - L2 LINE L2 -15 3257 2824 394 188 9 36 chr10 51789526 51789638 -88527127 - L1M LINE L1 -937 5366 5258 1437 198 19 3 chr10 51789670 51789983 -88526782 + L1M2 LINE L1 4931 5248 -898 * 1551 161 0 22 chr10 51789977 51790250 -88526515 - L1 LINE L1 -1210 4936 4670 2490 143 30 11 chr10 51790250 51790698 -88526067 + L1M2 LINE L1 5328 5785 -506 319 264 0 47 chr10 51790769 51790875 -88525890 - L2 LINE L2 0 3313 3213 420 122 92 0 chr10 51791520 51791618 -88525147 + T-rich Low_complexity Low_complexity 3 109 0 1792 162 6 29 chr10 51791631 51791946 -88524819 - AluJb SINE Alu -1 311 4 23 0 0 0 chr10 51792025 51792048 -88524717 + AT_rich Low_complexity Low_complexity 1 23 0 247 153 34 17 chr10 51792188 51792247 -88524518 + L1M2 LINE L1 5772 5831 -469 275 96 17 58 chr10 51792410 51792446 -88524319 + L1MA6 LINE L1 5777 5814 -342 2752 165 4 17 chr10 51792446 51792968 -88523797 + L1MA6 LINE L1 5786 6300 0 275 96 17 58 chr10 51792968 51792997 -88523768 + L1MA6 LINE L1 5814 5843 -313 421 258 97 43 chr10 51792997 51793183 -88523582 + MIR SINE MIR 66 261 -1 781 245 108 16 chr10 51793519 51793913 -88522852 + LTR48 LTR ERV1 226 740 -47 504 262 0 0 chr10 51794019 51794141 -88522624 + MER58 DNA MER1_type 2299 2420 0 321 286 15 45 chr10 51794518 51794651 -88522114 - L1ME4a LINE L1 -31 6090 5962 496 298 69 16 chr10 51794680 51794868 -88521897 + MLT1J LTR MaLR 110 307 -204 401 229 14 49 chr10 51795111 51795255 -88521510 + L1ME4a LINE L1 5982 6120 -1 23 0 0 0 chr10 51795336 51795359 -88521406 + AT_rich Low_complexity Low_complexity 1 23 0 2169 122 0 0 chr10 51795661 51795973 -88520792 + AluSx SINE Alu 1 312 0 198 0 0 0 chr10 51796557 51796579 -88520186 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 288 286 76 82 chr10 51796721 51797094 -88519671 - L1MC4 LINE L1 -15 8027 7554 1390 221 81 85 chr10 51797094 51797638 -88519127 + MLT1F LTR MaLR 1 542 0 288 286 76 82 chr10 51797638 51797884 -88518881 - L1MC4 LINE L1 -488 7554 7308 553 314 11 5 chr10 51797884 51798069 -88518696 - L1MC4 LINE L1 -566 7476 7291 184 365 52 10 chr10 51799052 51799148 -88517617 - L3b LINE CR1 -123 1460 1361 203 401 98 0 chr10 51800300 51800432 -88516333 - L3 LINE CR1 -1066 511 367 2622 150 17 0 chr10 51801577 51801996 -88514769 + MSTB LTR MaLR 1 426 0 1967 166 0 0 chr10 51802349 51802656 -88514109 + AluJo SINE Alu 1 307 -5 417 183 226 0 chr10 51803313 51803428 -88513337 - Charlie1 DNA MER1_type -2 2759 2619 * 674 256 155 5 chr10 51803410 51803617 -88513148 - Charlie1 DNA MER1_type -2521 240 3 596 137 20 196 chr10 51804041 51804694 -88512071 - L1MA2 LINE L1 -241 6063 5519 249 216 39 0 chr10 51804695 51804746 -88512019 - L1M4 LINE L1 -1287 4859 4807 2443 258 34 7 chr10 51804996 51805670 -88511095 + L1ME3 LINE L1 5471 6162 0 29 84 0 0 chr10 51806317 51806388 -88510377 + AT_rich Low_complexity Low_complexity 1 71 0 2553 136 18 43 chr10 51806925 51807341 -88509424 + MSTB1 LTR MaLR 1 355 -41 2782 16 0 0 chr10 51807341 51807652 -88509113 - AluYa5 SINE Alu 0 311 1 2553 136 18 43 chr10 51807652 51807693 -88509072 + MSTB1 LTR MaLR 355 396 0 198 167 0 0 chr10 51808508 51808544 -88508221 + A-rich Low_complexity Low_complexity 5 40 0 3552 56 2 6 chr10 51808712 51809178 -88507587 + L1PA7 LINE L1 5689 6152 -2 21 36 0 0 chr10 51809319 51809347 -88507418 + AT_rich Low_complexity Low_complexity 1 28 0 315 0 0 0 chr10 51809798 51809833 -88506932 + (CA)n Simple_repeat Simple_repeat 2 36 0 3066 103 5 2 chr10 51811595 51812013 -88504752 + HSMAR1 DNA Mariner 868 1286 -1 229 255 21 0 chr10 51812013 51812060 -88504705 - MIR SINE MIR -174 88 41 473 217 22 0 chr10 51812133 51812225 -88504540 + MER5A DNA MER1_type 2 95 -94 230 300 14 0 chr10 51812464 51812534 -88504231 + MIR SINE MIR 76 146 -62 345 361 66 24 chr10 51812935 51813101 -88503664 + MIR3 SINE MIR 29 201 -7 1610 186 3 23 chr10 51815440 51815746 -88501019 - AluJb SINE Alu -12 300 1 2741 173 107 14 chr10 51816109 51816700 -88500065 + MER39 LTR ERV1 62 707 0 667 269 24 0 chr10 51816701 51816868 -88499897 + MER45A DNA AcHobo 8 178 0 190 191 16 32 chr10 51817986 51818049 -88498716 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 22 35 0 0 chr10 51818649 51818678 -88498087 + AT_rich Low_complexity Low_complexity 1 29 0 297 257 88 61 chr10 51822488 51822599 -88494166 - L2 LINE L2 -4 3309 3192 1402 170 99 46 chr10 51822599 51822923 -88493842 + MER58B DNA MER1_type 1 341 0 297 257 88 61 chr10 51822923 51822959 -88493806 - L2 LINE L2 -121 3192 3158 1197 223 64 21 chr10 51823097 51823424 -88493341 + MLT1A2 LTR MaLR 2 342 -32 1860 145 108 6 chr10 51823424 51823756 -88493009 + MER47A DNA MER2_type 1 366 0 1508 197 129 23 chr10 51823815 51824256 -88492509 + Charlie4a DNA MER1_type 21 508 0 306 153 0 0 chr10 51824916 51824975 -88491790 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 4132 176 12 17 chr10 51825605 51826418 -88490347 + L1MB4 LINE L1 5354 6162 -18 27 68 0 14 chr10 51826418 51826477 -88490288 + AT_rich Low_complexity Low_complexity 1 60 -12 186 118 0 0 chr10 51826477 51826511 -88490254 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 27 68 0 14 chr10 51826511 51826524 -88490241 + AT_rich Low_complexity Low_complexity 60 72 0 235 139 49 25 chr10 51826559 51826681 -88490084 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 25 31 0 0 chr10 51826732 51826764 -88490001 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr10 51826862 51826883 -88489882 + AT_rich Low_complexity Low_complexity 1 21 0 469 208 30 0 chr10 51827121 51827222 -88489543 - MLT2B2 LTR ERVL -4 511 408 * 1375 179 17 0 chr10 51827211 51827446 -88489319 - MLT2B2 LTR ERVL -276 239 1 1189 206 48 3 chr10 51827526 51827836 -88488929 + MER33 DNA MER1_type 1 324 0 311 302 208 25 chr10 51829052 51829254 -88487511 - MIR SINE MIR -14 248 10 1005 170 32 0 chr10 51829289 51829507 -88487258 - L1MA8 LINE L1 -3 6288 6064 1964 207 30 19 chr10 51829527 51829996 -88486769 - L1 LINE L1 -3325 4240 3767 2065 135 0 7 chr10 51829997 51830293 -88486472 + AluSx SINE Alu 1 294 -18 1536 268 83 53 chr10 51830311 51831138 -88485627 - L1 LINE L1 -4706 2859 2008 185 281 91 41 chr10 51832512 51832633 -88484132 + L3b LINE CR1 1147 1273 -310 363 327 47 0 chr10 51832715 51832822 -88483943 - L2 LINE L2 -7 3265 3154 271 362 136 13 chr10 51832963 51833198 -88483567 + L3 LINE CR1 1281 1544 -33 227 411 80 6 chr10 51833521 51833684 -88483081 + MIR SINE MIR 58 232 -30 1961 141 3 3 chr10 51833938 51834237 -88482528 + AluSq SINE Alu 1 299 -14 313 250 171 0 chr10 51834304 51834392 -88482373 + L2 LINE L2 3168 3270 -2 232 284 0 45 chr10 51834507 51834574 -88482191 + L3 LINE CR1 246 309 -1268 214 322 114 20 chr10 51837307 51837456 -88479309 - L2 LINE L2 -4 3309 3147 23 0 0 0 chr10 51838913 51838936 -88477829 + AT_rich Low_complexity Low_complexity 1 23 0 640 204 97 23 chr10 51840299 51840475 -88476290 - MER5A DNA MER1_type 0 189 1 1718 176 0 14 chr10 51840479 51840775 -88475990 + AluSx SINE Alu 1 292 -20 26 0 0 0 chr10 51840920 51840946 -88475819 + AT_rich Low_complexity Low_complexity 1 26 0 188 300 0 0 chr10 51841168 51841218 -88475547 - MER5A DNA MER1_type -1 188 139 754 243 41 49 chr10 51841233 51841292 -88475473 + MIR SINE MIR 2 60 -202 1990 128 19 48 chr10 51841292 51841667 -88475098 - THE1B LTR MaLR 0 364 1 754 243 41 49 chr10 51841667 51841850 -88474915 + MIR SINE MIR 60 242 -20 435 139 63 0 chr10 51841885 51841964 -88474801 - Tigger5 DNA MER2_type 0 2323 2240 236 200 0 0 chr10 51841963 51842008 -88474757 - Tigger5 DNA MER2_type -28 2295 2251 * 375 164 0 0 chr10 51841977 51842032 -88474733 - Tigger5 DNA MER2_type -2268 55 1 231 36 0 0 chr10 51842980 51843008 -88473757 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr10 51843814 51843836 -88472929 + AT_rich Low_complexity Low_complexity 1 22 0 188 266 125 0 chr10 51845983 51846047 -88470718 + L2 LINE L2 3191 3262 -10 3202 145 39 19 chr10 51846182 51846770 -88469995 + L1MC1 LINE L1 5733 6332 -1 325 306 118 0 chr10 51846890 51847060 -88469705 + MIR SINE MIR 72 261 -1 1762 159 3 3 chr10 51847363 51847674 -88469091 - AluSx SINE Alu 0 311 1 365 277 67 25 chr10 51848115 51848234 -88468531 - MIR SINE MIR -87 175 52 1929 129 11 3 chr10 51848338 51848626 -88468139 + AluSq SINE Alu 6 319 0 217 0 0 0 chr10 51848626 51848650 -88468115 + (TAA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 51849976 51850000 -88466765 + AT_rich Low_complexity Low_complexity 1 24 0 201 237 0 0 chr10 51850015 51850074 -88466691 + T-rich Low_complexity Low_complexity 1 59 0 236 231 147 58 chr10 51850190 51850335 -88466430 + MIR SINE MIR 30 192 -60 630 300 69 24 chr10 51851673 51851963 -88464802 - L1ME LINE L1 -336 5785 5483 1955 161 17 23 chr10 51852771 51852891 -88463874 + MER7A DNA MER2_type 1 120 -2918 409 145 0 36 chr10 51852891 51852974 -88463791 + MADE1 DNA Mariner 1 80 0 1955 161 17 23 chr10 51852974 51853202 -88463563 + MER7A DNA MER2_type 120 345 -1 2216 121 12 21 chr10 51853252 51853592 -88463173 - MER1B DNA MER1_type 0 337 1 1334 119 17 42 chr10 51854093 51854329 -88462436 - MER30 DNA MER1_type 0 230 1 363 319 26 9 chr10 51854803 51854919 -88461846 - MER5A DNA MER1_type 0 189 72 32 0 0 0 chr10 51856042 51856074 -88460691 + AT_rich Low_complexity Low_complexity 1 32 0 364 374 16 33 chr10 51856379 51856561 -88460204 - MIR3 SINE MIR -18 190 12 766 225 6 44 chr10 51857278 51857460 -88459305 + MLT1A2 LTR MaLR 24 198 -176 3307 129 15 65 chr10 51857461 51858049 -88458716 + MER61E LTR ERV1 7 565 -4 686 236 17 11 chr10 51858055 51858233 -88458532 + MLT1A2 LTR MaLR 210 388 -2 225 0 0 0 chr10 51858237 51858262 -88458503 + (A)n Simple_repeat Simple_repeat 1 25 0 269 330 80 0 chr10 51858465 51858553 -88458212 - L2 LINE L2 0 3313 3219 1790 206 11 8 chr10 51858994 51859358 -88457407 - MLT1A1 LTR MaLR 0 365 1 2551 135 28 30 chr10 51859964 51860393 -88456372 + MSTC LTR MaLR 1 428 0 1384 178 15 89 chr10 51860525 51860851 -88455914 + AluJo SINE Alu 1 302 -10 298 280 43 54 chr10 51861062 51861155 -88455610 - MIR3 SINE MIR -102 106 15 1788 168 7 3 chr10 51862947 51863245 -88453520 - AluSx SINE Alu -13 299 1 2187 125 0 0 chr10 51863306 51863611 -88453154 + AluSx SINE Alu 1 305 -7 318 87 0 0 chr10 51864274 51864320 -88452445 + (CA)n Simple_repeat Simple_repeat 2 47 0 352 118 21 86 chr10 51864456 51864504 -88452261 + LTR43 LTR ERV1 171 221 -381 2278 97 0 23 chr10 51864504 51864812 -88451953 + AluSx SINE Alu 1 301 -11 4536 66 0 5 chr10 51864814 51865402 -88451363 + L1PA8 LINE L1 5588 6172 0 352 118 21 86 chr10 51865402 51865443 -88451322 + LTR43 LTR ERV1 222 257 -345 1304 183 70 0 chr10 51866197 51866498 -88450267 - MER33 DNA MER1_type -1 323 2 2064 138 3 6 chr10 51866674 51866986 -88449779 + AluSx SINE Alu 1 311 -1 27 0 0 0 chr10 51867003 51867030 -88449735 + AT_rich Low_complexity Low_complexity 1 27 0 2258 71 3 3 chr10 51867211 51867544 -88449221 - AluY SINE Alu 0 333 1 1652 190 7 13 chr10 51867577 51867877 -88448888 - AluJb SINE Alu -14 298 1 300 130 0 0 chr10 51967912 51967958 -88348807 - L1 LINE L1 -1983 4163 4118 2213 93 7 23 chr10 51968049 51968351 -88348414 - AluSc SINE Alu -12 297 1 1522 232 104 25 chr10 51968385 51968915 -88347850 - L1MC4 LINE L1 -75 7967 7396 537 217 117 8 chr10 51969048 51969168 -88347597 - FLAM_A SINE Alu 0 133 1 352 109 0 0 chr10 51969321 51969376 -88347389 - Alu SINE Alu -247 55 1 547 254 133 6 chr10 51969433 51969614 -88347151 + MIR SINE MIR 59 262 0 2073 49 32 0 chr10 51970236 51970483 -88346282 + AluY SINE Alu 1 255 -56 244 209 0 0 chr10 51970583 51970626 -88346139 - AluJ/monomer SINE Alu -259 44 2 1050 146 41 36 chr10 51970627 51970846 -88345919 + THE1C LTR MaLR 153 372 -3 426 288 152 16 chr10 51970879 51971063 -88345702 + MIR SINE MIR 35 243 -19 2243 114 3 0 chr10 51972200 51972497 -88344268 - AluSx SINE Alu -14 298 1 24 53 0 0 chr10 51972891 51972929 -88343836 + AT_rich Low_complexity Low_complexity 1 38 0 2283 96 0 10 chr10 51973589 51973882 -88342883 - AluSq SINE Alu -23 290 1 1784 153 27 7 chr10 51974029 51974323 -88342442 - AluSx SINE Alu -12 300 1 2271 119 0 0 chr10 51974717 51975028 -88341737 - AluSx SINE Alu -1 311 1 220 82 197 49 chr10 51975111 51975172 -88341593 + MIR SINE MIR 161 230 -32 22 0 0 0 chr10 51975192 51975214 -88341551 + AT_rich Low_complexity Low_complexity 1 22 0 369 186 0 0 chr10 51975740 51975799 -88340966 - MER5A DNA MER1_type -80 109 51 226 270 149 0 chr10 51976309 51976383 -88340382 + L1MC/D LINE L1 5741 5825 -1983 2374 85 7 0 chr10 51976637 51976942 -88339823 - AluSx SINE Alu -5 307 1 423 260 58 110 chr10 51977573 51977938 -88338827 - L1MC4 LINE L1 -2 8040 7695 2355 70 7 0 chr10 51978138 51978425 -88338340 + AluSc SINE Alu 6 294 -15 181 311 67 59 chr10 51978572 51978691 -88338074 - L2 LINE L2 -11 3302 3183 200 322 35 23 chr10 51980287 51980374 -88336391 - MIR3 SINE MIR -31 177 90 731 216 134 0 chr10 51980560 51980731 -88336034 - MLT1A2 LTR MaLR 0 374 181 2180 93 17 3 chr10 51980742 51981042 -88335723 - AluSq SINE Alu -9 304 1 430 302 55 43 chr10 51981249 51981597 -88335168 - L1M4 LINE L1 -3610 2536 2185 2259 109 0 16 chr10 51982035 51982346 -88334419 - AluSg SINE Alu -4 306 1 331 315 70 29 chr10 51982544 51982568 -88334197 - HAL1b LINE L1 -778 570 548 693 186 29 0 chr10 51982568 51982708 -88334057 - L1MA4 LINE L1 -6 6294 6151 331 315 70 29 chr10 51982708 51983067 -88333698 - HAL1b LINE L1 -800 548 171 2357 77 3 13 chr10 51983069 51983382 -88333383 - AluY SINE Alu -1 310 1 815 136 40 0 chr10 51983430 51983555 -88333210 - FRAM SINE Alu -2 174 45 2163 77 24 7 chr10 51983682 51983969 -88332796 - AluY SINE Alu -19 292 1 23 33 0 0 chr10 51984513 51984543 -88332222 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 51984672 51984705 -88332060 + AT_rich Low_complexity Low_complexity 1 33 0 2240 109 7 0 chr10 51984837 51985140 -88331625 + AluSp SINE Alu 1 305 -8 2355 92 3 13 chr10 51985140 51985455 -88331310 + AluSp SINE Alu 1 312 -1 2155 106 10 17 chr10 51985475 51985776 -88330989 + AluSx SINE Alu 1 299 -13 3204 156 21 57 chr10 51985790 51986400 -88330365 - L1MB2 LINE L1 -2 6169 5582 1339 158 28 28 chr10 51986400 51986647 -88330118 - LTR47A LTR ERVL 0 452 206 2300 103 0 0 chr10 51986648 51986950 -88329815 + AluSx SINE Alu 1 302 -10 468 183 54 0 chr10 51986961 51987054 -88329711 - LTR47A LTR ERVL -350 102 5 376 327 205 23 chr10 51987062 51987447 -88329318 + L2 LINE L2 2854 3308 -5 1530 168 4 32 chr10 51987607 51987887 -88328878 - AluJo SINE Alu -25 287 16 663 229 8 8 chr10 51987909 51988040 -88328725 - FLAM_A SINE Alu -2 131 1 239 239 152 14 chr10 51988626 51988764 -88328001 - L1MC4 LINE L1 -878 7164 7008 1440 146 0 5 chr10 51988768 51988981 -88327784 - AluJb SINE Alu -13 299 88 2164 132 3 0 chr10 51989691 51989995 -88326770 + AluSx SINE Alu 1 305 -7 389 223 178 88 chr10 51990760 51991114 -88325651 + L2 LINE L2 2918 3303 -10 646 243 121 27 chr10 51991166 51991612 -88325153 - MLT1H1 LTR MaLR -7 542 35 1841 150 3 14 chr10 51992068 51992362 -88324403 - AluY SINE Alu -20 291 1 1899 201 50 22 chr10 51992653 51992834 -88323931 + MSTB LTR MaLR 1 176 -250 2226 127 0 0 chr10 51992834 51993133 -88323632 + AluSx SINE Alu 1 299 -13 1899 201 50 22 chr10 51993133 51993354 -88323411 + MSTB LTR MaLR 176 414 -12 669 206 0 64 chr10 51994369 51994510 -88322255 + FLAM_A SINE Alu 1 132 -1 2267 100 0 16 chr10 51995425 51995735 -88321030 - AluSx SINE Alu -7 305 1 234 204 0 0 chr10 51997410 51997454 -88319311 + (CCCTAG)n Simple_repeat Simple_repeat 1 44 0 311 222 244 34 chr10 51997814 51997990 -88318775 + L2 LINE L2 3099 3311 -2 370 271 26 94 chr10 51998765 51998957 -88317808 - MIR3 SINE MIR -27 181 3 5451 135 29 8 chr10 51999851 52000837 -88315928 + L1PA16 LINE L1 5162 6166 0 2375 86 0 0 chr10 52000846 52001138 -88315627 + AluSc SINE Alu 1 292 -17 4969 192 19 22 chr10 52001181 52002449 -88314316 + L1MB3 LINE L1 2304 3567 -2579 2341 84 10 0 chr10 52002457 52002756 -88314009 + AluY SINE Alu 1 302 -9 1421 189 4 4 chr10 52003001 52003239 -88313526 + AluJo SINE Alu 9 246 -66 198 0 0 0 chr10 52003239 52003261 -88313504 + (A)n Simple_repeat Simple_repeat 1 22 0 37 52 0 0 chr10 52003407 52003465 -88313300 + AT_rich Low_complexity Low_complexity 1 58 0 191 379 40 16 chr10 52004303 52004427 -88312338 + MIR SINE MIR 18 144 -64 1996 117 10 24 chr10 52004693 52004991 -88311774 - AluSg SINE Alu -16 294 1 2058 122 10 14 chr10 52005849 52006143 -88310622 + AluSx SINE Alu 1 293 -19 2296 71 0 0 chr10 52007108 52007417 -88309348 + AluY SINE Alu 1 309 0 272 315 164 7 chr10 52007489 52007635 -88309130 - L2 LINE L2 -1304 2010 1842 1449 229 41 0 chr10 52007760 52008122 -88308643 + L1MB3 LINE L1 4748 5124 -1022 3397 155 52 45 chr10 52008229 52009003 -88307762 + L1MB3 LINE L1 5395 6173 -10 605 226 0 0 chr10 52010053 52010168 -88306597 + AluJb SINE Alu 132 246 -66 1670 128 0 0 chr10 52010172 52010398 -88306367 + AluJb SINE Alu 71 296 -16 622 72 0 0 chr10 52010398 52010481 -88306284 + AluY SINE Alu 1 83 -228 295 122 0 0 chr10 52010581 52010622 -88306143 - Alu SINE Alu -259 41 1 2387 83 0 7 chr10 52011163 52011463 -88305302 + AluSg SINE Alu 1 298 -12 794 294 41 5 chr10 52011927 52012148 -88304617 + MIR SINE MIR 15 243 -19 2390 83 0 0 chr10 52012289 52012590 -88304175 + AluSg SINE Alu 1 301 -9 3323 170 17 3 chr10 52012942 52013590 -88303175 + L1MB7 LINE L1 5482 6138 -46 1718 172 14 10 chr10 52013639 52013935 -88302830 + AluJo SINE Alu 1 297 -15 238 140 0 20 chr10 52013958 52014008 -88302757 + L1MB8 LINE L1 6130 6178 0 508 149 11 0 chr10 52014925 52015012 -88301753 + MLT1A2 LTR MaLR 276 363 -11 1711 148 4 8 chr10 52015012 52015275 -88301490 - AluJo SINE Alu -12 300 39 2891 225 26 32 chr10 52015290 52016055 -88300710 + L1ME1 LINE L1 5361 6122 -44 1707 212 80 16 chr10 52016055 52016494 -88300271 + MLT1C LTR MaLR 1 467 0 2891 225 26 32 chr10 52016494 52016537 -88300228 + L1ME1 LINE L1 6122 6164 -2 26 30 0 0 chr10 52016676 52016709 -88300056 + AT_rich Low_complexity Low_complexity 1 33 0 949 282 17 0 chr10 52016845 52017132 -88299633 + L1MCb LINE L1 1 292 -5753 3043 191 53 57 chr10 52017137 52017893 -88298872 + L1MCb LINE L1 521 1278 -5286 2219 59 55 0 chr10 52017893 52018182 -88298583 + AluY SINE Alu 1 305 -6 3043 191 53 57 chr10 52018182 52018202 -88298563 + L1MCb LINE L1 1278 1297 -5267 698 229 0 0 chr10 52018202 52018333 -88298432 + FLAM_A SINE Alu 1 131 -2 3043 191 53 57 chr10 52018333 52019073 -88297692 + L1MCb LINE L1 1297 2031 -4533 369 169 0 0 chr10 52019073 52019138 -88297627 + AluJ/FLAM SINE Alu 1 65 -237 956 119 0 8 chr10 52019284 52019418 -88297347 - AluSq/x SINE Alu -180 133 1 190 0 67 0 chr10 52019426 52019456 -88297309 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 242 224 13 26 chr10 52019652 52019728 -88297037 + L1ME LINE L1 5603 5677 -444 361 272 106 64 chr10 52019774 52019850 -88296915 + L1M4 LINE L1 4565 4636 -1510 1928 133 0 78 chr10 52019850 52020182 -88296583 + AluSq SINE Alu 2 307 -6 361 272 106 64 chr10 52020182 52020388 -88296377 + L1M4 LINE L1 4636 4859 -1287 1104 151 15 34 chr10 52020481 52020686 -88296079 + AluJo SINE Alu 104 304 -8 243 0 0 0 chr10 52021018 52021045 -88295720 + (CA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr10 52021148 52021169 -88295596 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2159 70 21 7 chr10 52021173 52021457 -88295308 - AluY SINE Alu -23 288 1 219 308 148 30 chr10 52022279 52022516 -88294249 - L2 LINE L2 -276 3037 2769 758 126 94 0 chr10 52022654 52022781 -88293984 - MER85 DNA T2_type 0 139 1 2451 76 0 7 chr10 52023310 52023611 -88293154 + AluY SINE Alu 2 300 -11 456 181 0 0 chr10 52023843 52023915 -88292850 + AluJ/FLAM SINE Alu 1 72 -240 1580 142 0 34 chr10 52023915 52024183 -88292582 + AluSx SINE Alu 41 299 -13 2436 64 0 0 chr10 52024487 52024782 -88291983 + AluY SINE Alu 2 296 -15 189 247 146 11 chr10 52024989 52025078 -88291687 + L2 LINE L2 2794 2894 -420 2249 76 24 3 chr10 52025968 52026256 -88290509 - AluSg SINE Alu -16 294 1 1415 157 36 36 chr10 52026386 52026666 -88290099 + AluJo SINE Alu 3 282 -30 316 278 185 25 chr10 52028167 52028329 -88288436 + MIR SINE MIR 57 244 -18 2461 78 0 0 chr10 52030323 52030632 -88286133 + AluY SINE Alu 2 310 -1 2420 67 0 0 chr10 52030707 52031005 -88285760 - AluY SINE Alu -13 298 1 3106 188 0 30 chr10 52032105 52032801 -88283964 - L1 LINE L1 -1685 4461 3786 2295 91 0 7 chr10 52032801 52033098 -88283667 - AluSg SINE Alu -15 295 1 3106 188 0 30 chr10 52033098 52033123 -88283642 - L1 LINE L1 -2360 3786 3762 3234 205 25 12 chr10 52033124 52033952 -88282813 + L1PB1 LINE L1 4459 5300 -846 2731 104 9 29 chr10 52033952 52034383 -88282382 + L1PB1 LINE L1 5709 6150 -1 3234 205 25 12 chr10 52034383 52034394 -88282371 + L1PB1 LINE L1 5300 5309 -837 1284 149 9 28 chr10 52034506 52034721 -88282044 - AluJo SINE Alu -15 297 87 286 293 194 11 chr10 52035447 52035730 -88281035 + HAL1 LINE L1 576 910 -1597 258 267 34 44 chr10 52035794 52036000 -88280765 + HAL1 LINE L1 1088 1291 -1216 7356 191 112 28 chr10 52036213 52037106 -88279659 + Cheshire DNA MER1_type 279 1095 -1325 1773 152 48 0 chr10 52037106 52037395 -88279370 - AluJb SINE Alu -5 307 5 7356 191 112 28 chr10 52037395 52038476 -88278289 + Cheshire DNA MER1_type 1095 2420 0 260 323 8 69 chr10 52038669 52038799 -88277966 - L2 LINE L2 -241 3031 2910 263 265 15 15 chr10 52039061 52039129 -88277636 - L3 LINE CR1 -241 1336 1269 914 244 104 9 chr10 52039140 52039538 -88277227 + MLT1E LTR MaLR 8 518 -75 21 0 0 0 chr10 52039556 52039577 -88277188 + AT_rich Low_complexity Low_complexity 1 21 0 181 343 136 59 chr10 52039610 52039896 -88276869 + L2 LINE L2 2959 3266 -6 195 296 34 3 chr10 52040023 52040097 -88276668 - MIR SINE MIR -35 173 94 1393 60 0 18 chr10 52041118 52041286 -88275479 + AluSc SINE Alu 1 165 -144 470 204 0 0 chr10 52042230 52042323 -88274442 - AluJ/FRAM SINE Alu -4 308 216 * 720 159 119 0 chr10 52042320 52042446 -88274319 - AluSg/x SINE Alu -44 268 128 254 267 9 29 chr10 52042546 52042651 -88274114 + AluJb SINE Alu 185 287 -15 228 182 0 0 chr10 52042729 52042773 -88273992 + (CA)n Simple_repeat Simple_repeat 2 45 0 1985 163 0 0 chr10 52042963 52043269 -88273496 - AluSx SINE Alu -6 306 1 223 82 197 49 chr10 52043351 52043412 -88273353 + MIR SINE MIR 161 230 -32 1981 139 26 0 chr10 52043800 52044103 -88272662 + AluSq SINE Alu 1 311 -2 2133 114 3 3 chr10 52045970 52046268 -88270497 + AluSg SINE Alu 1 298 -12 2903 152 30 50 chr10 52047356 52047995 -88268770 + L1MB2 LINE L1 4426 5051 -1095 1100 129 0 31 chr10 52047981 52048174 -88268591 + L1MB2 LINE L1 5650 5836 -335 * 648 117 39 39 chr10 52048181 52048309 -88268456 + L1MB2 LINE L1 6035 6162 -9 24 0 0 0 chr10 52048309 52048333 -88268432 + AT_rich Low_complexity Low_complexity 1 24 0 257 227 55 68 chr10 52048399 52048562 -88268203 + L1ME3 LINE L1 3686 3846 -2300 1554 173 86 43 chr10 52048598 52048773 -88267992 - L1M4 LINE L1 -3215 2931 2765 2102 145 0 3 chr10 52048773 52049069 -88267696 + AluSx SINE Alu 6 300 -12 1554 173 86 43 chr10 52049069 52049361 -88267404 - L1M4 LINE L1 -3381 2765 2444 2179 116 3 0 chr10 52049474 52049775 -88266990 + AluSx SINE Alu 1 302 -10 2148 110 0 0 chr10 52049885 52050201 -88266564 + AluSg SINE Alu 1 316 0 2700 217 58 42 chr10 52050201 52050617 -88266148 + L1ME3 LINE L1 5133 5541 -621 2170 78 45 36 chr10 52050617 52050925 -88265840 + AluY SINE Alu 1 311 0 2700 217 58 42 chr10 52050925 52051508 -88265257 + L1ME3 LINE L1 5541 6143 -19 1005 225 45 23 chr10 52051556 52051904 -88264861 + L1ME LINE L1 5239 5597 -573 26 50 0 0 chr10 52051922 52051962 -88264803 + AT_rich Low_complexity Low_complexity 1 40 0 2259 92 7 7 chr10 52052913 52053205 -88263560 - AluSc SINE Alu -17 292 1 226 137 137 20 chr10 52053540 52053591 -88263174 + L2 LINE L2 3211 3267 -5 502 271 119 23 chr10 52054151 52054369 -88262396 - MIR SINE MIR -12 250 12 237 178 0 0 chr10 52054699 52054744 -88262021 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 2219 95 0 10 chr10 52054755 52055060 -88261705 + AluY SINE Alu 1 302 -9 520 163 0 0 chr10 52055178 52055258 -88261507 + FRAM/FAM SINE Alu 4 83 -93 2636 200 37 20 chr10 52057064 52057610 -88259155 + MER68 LTR ERV1 6 560 -2 1912 117 64 0 chr10 52057908 52058174 -88258591 - AluSq SINE Alu -30 283 1 267 133 0 0 chr10 52058462 52058507 -88258258 + (A)n Simple_repeat Simple_repeat 1 45 0 1624 145 60 0 chr10 52058654 52058902 -88257863 - AluJb SINE Alu -24 288 26 1982 120 9 47 chr10 52060853 52061170 -88255595 + AluSg SINE Alu 1 305 -5 340 256 0 13 chr10 52061963 52062041 -88254724 + Charlie1a DNA MER1_type 1 77 -1378 2349 105 0 0 chr10 52062042 52062346 -88254419 - AluSq SINE Alu -9 304 1 2430 229 186 22 chr10 52062412 52062774 -88253991 + Charlie1a DNA MER1_type 86 388 -2373 1215 179 101 30 chr10 52062774 52063042 -88253723 + AluJo SINE Alu 1 287 -15 2430 229 186 22 chr10 52063042 52063519 -88253246 + Charlie1a DNA MER1_type 388 786 -1975 2208 115 3 0 chr10 52063519 52063814 -88252951 - AluSx SINE Alu -12 300 5 2430 229 186 22 chr10 52063814 52063828 -88252937 + Charlie1a DNA MER1_type 786 796 -1965 2061 137 0 0 chr10 52063828 52064127 -88252638 - AluY SINE Alu -12 299 1 2430 229 186 22 chr10 52064127 52064293 -88252472 + Charlie1a DNA MER1_type 796 1274 -181 755 244 6 0 chr10 52064309 52064465 -88252300 + MER20 DNA MER1_type 60 216 -3 236 244 59 30 chr10 52064465 52064600 -88252165 + Charlie1a DNA MER1_type 1302 1440 -15 640 277 0 0 chr10 52065076 52065235 -88251530 - FRAM SINE Alu -6 160 2 1246 81 0 0 chr10 52065265 52065414 -88251351 - AluSp SINE Alu -35 278 130 285 156 86 117 chr10 52065563 52065691 -88251074 - MIR3 SINE MIR -1 207 84 552 246 46 29 chr10 52065729 52065904 -88250861 - MER5B DNA MER1_type 0 178 1 207 100 0 0 chr10 52066790 52066820 -88249945 + (CAT)n Simple_repeat Simple_repeat 3 32 0 741 136 7 79 chr10 52068048 52068188 -88248577 + AluSq/x SINE Alu 4 133 -179 2083 124 0 3 chr10 52069847 52070137 -88246628 - AluSg SINE Alu -21 289 1 362 79 16 0 chr10 52071934 52071997 -88244768 + (TA)n Simple_repeat Simple_repeat 2 65 0 2133 116 0 3 chr10 52071997 52072291 -88244474 - AluSx SINE Alu -19 293 1 1899 113 4 4 chr10 52072379 52072645 -88244120 - AluSq SINE Alu -11 302 37 778 131 7 58 chr10 52073682 52073819 -88242946 - AluSq/x SINE Alu -180 133 4 195 42 0 0 chr10 52073860 52073884 -88242881 + (T)n Simple_repeat Simple_repeat 1 24 0 228 67 0 0 chr10 52075082 52075112 -88241653 + (ATG)n Simple_repeat Simple_repeat 3 32 0 338 361 50 36 chr10 52075203 52075619 -88241146 - L3 LINE CR1 -24 1553 1132 348 186 0 0 chr10 52075720 52075779 -88240986 - MER5A DNA MER1_type -80 109 51 333 313 122 0 chr10 52076274 52076405 -88240360 + L1MC/D LINE L1 5679 5825 -1983 396 259 67 108 chr10 52077268 52077639 -88239126 - L1MC4 LINE L1 -2 8040 7685 240 129 0 0 chr10 52077730 52077761 -88239004 - MER1B DNA MER1_type 0 339 309 * 1302 105 64 41 chr10 52077750 52077969 -88238796 - MER1B DNA MER1_type -73 224 1 399 278 101 23 chr10 52077995 52078632 -88238133 - L1MD3 LINE L1 -218 7777 7010 1429 127 38 0 chr10 52078632 52078844 -88237921 - AluJb SINE Alu -2 310 91 2108 138 3 0 chr10 52079572 52079876 -88236889 + AluSx SINE Alu 1 305 -7 307 194 101 101 chr10 52080855 52080994 -88235771 + L2 LINE L2 3165 3303 -10 628 261 117 29 chr10 52081046 52081524 -88235241 - MLT1H1 LTR MaLR -7 542 3 21 0 0 0 chr10 52082037 52082058 -88234707 + AT_rich Low_complexity Low_complexity 1 21 0 1615 158 60 18 chr10 52082241 52082525 -88234240 - AluSq SINE Alu -12 301 6 22 56 0 0 chr10 52082612 52082648 -88234117 + AT_rich Low_complexity Low_complexity 1 36 0 2418 74 0 3 chr10 52082658 52082957 -88233808 + AluY SINE Alu 1 298 -13 24 32 0 0 chr10 52083827 52083858 -88232907 + AT_rich Low_complexity Low_complexity 1 31 0 2511 68 0 3 chr10 52083868 52084178 -88232587 + AluY SINE Alu 1 309 -2 2069 130 33 0 chr10 52084967 52085266 -88231499 - AluSx SINE Alu -3 309 1 1972 101 39 0 chr10 52085477 52085735 -88231030 - AluSx SINE Alu -44 268 1 1041 194 19 25 chr10 52085802 52086166 -88230599 - Tigger2 DNA MER2_type -10 2708 1 323 272 193 15 chr10 52086363 52086565 -88230200 + MIR SINE MIR 14 251 -11 1238 251 78 33 chr10 52087799 52088289 -88228476 - MER39 LTR ERV1 -2 682 11 2255 100 7 7 chr10 52088718 52089009 -88227756 + AluSp SINE Alu 1 291 -22 1539 152 0 0 chr10 52089375 52089605 -88227160 + MER30 DNA MER1_type 1 230 0 371 222 11 157 chr10 52089617 52089674 -88227091 - MER5B DNA MER1_type -4 174 110 2385 95 0 13 chr10 52089674 52089989 -88226776 + AluSx SINE Alu 1 311 -1 371 222 11 157 chr10 52089989 52090116 -88226649 - MER5B DNA MER1_type -68 110 17 192 204 23 0 chr10 52090186 52090230 -88226535 - MER5A DNA MER1_type -80 109 65 2106 127 33 0 chr10 52091062 52091361 -88225404 - AluSx SINE Alu -3 309 1 995 206 19 22 chr10 52091428 52091791 -88224974 - Tigger2 DNA MER2_type -10 2708 1 325 267 193 15 chr10 52091988 52092190 -88224575 + MIR SINE MIR 14 251 -11 1316 102 0 5 chr10 52093459 52093645 -88223120 + AluY SINE Alu 127 311 0 1190 137 0 0 chr10 52093657 52093825 -88222940 + AluSg/x SINE Alu 129 296 -14 599 180 16 16 chr10 52094017 52094139 -88222626 - L1MB7 LINE L1 -19 6165 6044 1902 168 0 0 chr10 52094196 52094488 -88222277 - AluJb SINE Alu -20 292 1 180 0 0 0 chr10 52094978 52094998 -88221767 + (T)n Simple_repeat Simple_repeat 1 20 0 369 200 14 0 chr10 52095474 52095544 -88221221 - MER58 DNA MER1_type -1 2419 2349 2250 104 0 25 chr10 52095899 52096215 -88220550 - AluSx SINE Alu -3 309 2 201 291 18 0 chr10 52097079 52097134 -88219631 - MIR SINE MIR -182 80 25 195 346 77 39 chr10 52097613 52097743 -88219022 - L2 LINE L2 -16 3256 3122 332 152 13 89 chr10 52097903 52097982 -88218783 - L1MC/D LINE L1 -605 5754 5682 2349 85 3 0 chr10 52098164 52098457 -88218308 - AluSx SINE Alu -18 294 1 2164 111 17 7 chr10 52099008 52099305 -88217460 - AluSq SINE Alu -13 300 1 2051 130 0 3 chr10 52099517 52099825 -88216940 - AluSq SINE Alu 0 307 1 25 31 0 0 chr10 52099830 52099862 -88216903 + AT_rich Low_complexity Low_complexity 1 32 0 2248 114 3 7 chr10 52100080 52100386 -88216379 - AluSq SINE Alu -8 305 1 1577 208 58 83 chr10 52100734 52100946 -88215819 - L1MC4 LINE L1 0 8042 7826 2448 97 0 0 chr10 52100946 52101256 -88215509 - AluSg SINE Alu 0 310 1 1912 110 0 0 chr10 52101257 52101511 -88215254 - AluSq SINE Alu -2 311 58 1577 208 58 83 chr10 52101511 52101815 -88214950 - L1MC4 LINE L1 -215 7827 7537 267 270 0 0 chr10 52101811 52101885 -88214880 - L1MC4 LINE L1 -723 7319 7246 * 4035 11 0 0 chr10 52102980 52103428 -88213337 - L1PA2 LINE L1 -1 6154 5707 392 155 0 28 chr10 52104264 52104335 -88212430 - THE1C LTR MaLR -306 69 1 300 111 37 0 chr10 52104388 52104442 -88212323 - AluSp/q SINE Alu 0 303 248 364 230 9 70 chr10 52104442 52104548 -88212217 - L1 LINE L1 -1769 4377 4280 2343 78 27 0 chr10 52104548 52104842 -88211923 - AluSp SINE Alu -11 302 1 364 230 9 70 chr10 52104842 52104871 -88211894 - L1 LINE L1 -1866 4280 4251 307 296 26 65 chr10 52104948 52105142 -88211623 - L1 LINE L1 -945 5201 5016 2263 113 0 0 chr10 52105142 52105444 -88211321 - AluSg SINE Alu -8 302 1 307 296 26 65 chr10 52105444 52105479 -88211286 - L1 LINE L1 -1130 5016 4981 832 192 5 62 chr10 52105508 52105670 -88211095 + MER58A DNA MER1_type 39 190 -2230 2273 105 0 0 chr10 52105670 52105966 -88210799 - AluSg SINE Alu -14 296 1 832 192 5 62 chr10 52105966 52105996 -88210769 + MER58A DNA MER1_type 190 220 -4 389 207 23 23 chr10 52106101 52106188 -88210577 + MER3 DNA MER1_type 1 87 -122 183 329 100 12 chr10 52106854 52107024 -88209741 + MIR SINE MIR 45 229 -33 214 179 23 0 chr10 52107860 52107911 -88208854 - MIR SINE MIR -57 151 100 6988 59 7 16 chr10 52109301 52110599 -88206166 - L1PA6 LINE L1 0 6154 4855 2384 76 0 41 chr10 52110599 52110913 -88205852 + AluSp SINE Alu 1 301 -12 6988 59 7 16 chr10 52110913 52110925 -88205840 - L1PA6 LINE L1 -1299 4855 4844 12620 64 12 0 chr10 52110925 52112544 -88204221 - L1PA6 LINE L1 -1824 4322 2685 2293 89 0 15 chr10 52112541 52112866 -88203899 - L1PA6 LINE L1 -3949 2197 1878 * 5761 199 67 17 chr10 52112843 52113370 -88203395 + L1MB8 LINE L1 3620 4119 -2059 2081 140 0 13 chr10 52113370 52113684 -88203081 + AluSx SINE Alu 1 310 -2 5761 199 67 17 chr10 52113684 52115581 -88201184 + L1MB8 LINE L1 4119 6168 -10 2238 103 0 7 chr10 52115581 52115881 -88200884 - AluSx SINE Alu -14 298 1 212 378 54 39 chr10 52217135 52217339 -88099426 - L2 LINE L2 -1049 2265 2059 192 135 0 0 chr10 52217449 52217486 -88099279 + (ATG)n Simple_repeat Simple_repeat 2 38 0 208 348 81 45 chr10 52219281 52219726 -88097039 + L2 LINE L2 2511 2971 -343 474 224 0 56 chr10 52219828 52219971 -88096794 + FLAM_A SINE Alu 8 142 0 231 253 10 40 chr10 52219992 52220091 -88096674 - L1ME4a LINE L1 -62 6059 5964 3378 143 40 12 chr10 52220307 52220995 -88095770 + Tigger7 DNA MER2_type 7 2486 -1 5823 124 60 12 chr10 52221166 52222287 -88094478 + Tigger3b DNA MER2_type 2 1207 -24 4955 128 41 30 chr10 52222690 52223053 -88093712 + Tigger2 DNA MER2_type 1857 2215 -503 2076 130 23 52 chr10 52223053 52223398 -88093367 + MER1B DNA MER1_type 3 337 0 4955 128 41 30 chr10 52223398 52223887 -88092878 + Tigger2 DNA MER2_type 2215 2718 0 22 0 0 0 chr10 52223908 52223930 -88092835 + AT_rich Low_complexity Low_complexity 1 22 0 216 24 48 24 chr10 52224157 52224199 -88092566 + (TA)n Simple_repeat Simple_repeat 2 44 0 23 33 0 0 chr10 52224221 52224251 -88092514 + AT_rich Low_complexity Low_complexity 1 30 0 1120 97 30 0 chr10 52225783 52225948 -88090817 - L1PA13 LINE L1 -2 6161 5992 1569 74 5 5 chr10 52225981 52226198 -88090567 - L1PB2 LINE L1 0 6151 5935 334 300 67 0 chr10 52226685 52226805 -88089960 - MIR3 SINE MIR -67 141 14 2845 10 3 0 chr10 52227524 52227838 -88088927 + AluYb8 SINE Alu 1 315 -3 189 94 0 0 chr10 52228467 52228499 -88088266 + (A)n Simple_repeat Simple_repeat 1 32 0 221 254 201 37 chr10 52229917 52230051 -88086714 + L2 LINE L2 1849 2004 -1310 1947 146 36 12 chr10 52230074 52230409 -88086356 + MLT1A1 LTR MaLR 23 365 0 697 347 146 37 chr10 52230437 52231279 -88085486 + L2 LINE L2 2040 2973 -341 366 264 173 0 chr10 52231443 52231553 -88085212 + L2 LINE L2 3184 3312 -1 2120 171 78 8 chr10 52232174 52232572 -88084193 + MSTB LTR MaLR 1 426 0 270 0 0 0 chr10 52232709 52232739 -88084026 + (TG)n Simple_repeat Simple_repeat 1 30 0 355 303 0 0 chr10 52232739 52232828 -88083937 + L1MC4 LINE L1 6615 6703 -1339 305 180 50 50 chr10 52232767 52232867 -88083898 - L1MCa LINE L1 -4362 2064 1965 * 21 57 0 0 chr10 52232929 52232964 -88083801 + AT_rich Low_complexity Low_complexity 1 35 0 1583 17 0 0 chr10 52233024 52233197 -88083568 + AluYa5 SINE Alu 130 302 -9 199 346 79 47 chr10 52233285 52233412 -88083353 + L2 LINE L2 3142 3272 0 234 91 0 0 chr10 52234471 52234504 -88082261 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1032 124 40 35 chr10 52234677 52234878 -88081887 + L1MA9 LINE L1 6106 6307 -5 21 0 0 0 chr10 52235032 52235053 -88081712 + AT_rich Low_complexity Low_complexity 1 21 0 703 127 9 0 chr10 52235235 52235384 -88081381 - AluSp/q SINE Alu 0 324 175 194 152 0 43 chr10 52235536 52235582 -88081183 + CT-rich Low_complexity Low_complexity 4 47 0 482 279 29 23 chr10 52235819 52235991 -88080774 - MER5B DNA MER1_type -4 174 2 1086 136 0 38 chr10 52236138 52236322 -88080443 + AluSg/x SINE Alu 132 308 -2 241 186 0 17 chr10 52237653 52237712 -88079053 + A-rich Low_complexity Low_complexity 2 59 0 218 189 0 0 chr10 52238669 52238706 -88078059 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 221 81 0 27 chr10 52240076 52240113 -88076652 + (TA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr10 52240938 52240969 -88075796 + AT_rich Low_complexity Low_complexity 1 31 0 222 364 121 14 chr10 52242039 52242179 -88074586 - L2 LINE L2 -36 3236 3082 27 29 0 0 chr10 52242310 52242344 -88074421 + AT_rich Low_complexity Low_complexity 1 34 0 194 354 75 20 chr10 52242372 52242519 -88074246 - MIR SINE MIR -46 216 62 698 266 120 33 chr10 52242841 52243082 -88073683 + MIR SINE MIR 1 262 0 181 360 75 20 chr10 52244890 52245037 -88071728 - MIR SINE MIR -46 216 62 641 73 0 42 chr10 52245901 52246040 -88070725 + AluY SINE Alu 205 311 0 33 25 0 0 chr10 52246657 52246697 -88070068 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr10 52247329 52247351 -88069414 + AT_rich Low_complexity Low_complexity 1 22 0 185 331 65 32 chr10 52247351 52247475 -88069290 - MIR SINE MIR -62 146 19 2311 97 0 3 chr10 52248100 52248400 -88068365 - AluSg SINE Alu -11 299 1 2112 101 17 3 chr10 52248759 52249046 -88067719 + AluSx SINE Alu 1 291 -21 2243 55 55 10 chr10 52249338 52249629 -88067136 + AluY SINE Alu 1 304 -7 232 313 56 49 chr10 52250238 52250382 -88066383 - MIR SINE MIR -21 241 97 293 260 13 0 chr10 52250535 52250612 -88066153 + MIR SINE MIR 184 261 -1 207 220 0 20 chr10 52251584 52251634 -88065131 + MIR SINE MIR 100 148 -114 718 294 13 17 chr10 52252228 52252459 -88064306 + MIR SINE MIR 33 262 0 351 65 0 0 chr10 52252635 52252681 -88064084 + (TGGA)n Simple_repeat Simple_repeat 4 49 0 372 308 50 8 chr10 52253511 52253631 -88063134 + MIR SINE MIR 12 136 -126 624 259 60 30 chr10 52253632 52253833 -88062932 - MER58C DNA MER1_type -2 213 7 266 305 74 137 chr10 52254658 52255104 -88061661 + L2 LINE L2 2843 3260 -12 318 140 0 0 chr10 52255107 52255155 -88061610 - MER53 DNA DNA 0 189 142 1136 185 93 103 chr10 52255155 52255522 -88061243 - MER57A LTR ERV1 0 403 41 567 162 95 34 chr10 52255513 52255661 -88061104 - MER53 DNA DNA -32 157 1 * 433 291 30 60 chr10 52255986 52256254 -88060511 - MIR SINE MIR 0 262 3 339 25 0 0 chr10 52256441 52256481 -88060284 + (TG)n Simple_repeat Simple_repeat 1 40 0 33 90 0 0 chr10 52256882 52256971 -88059794 + AT_rich Low_complexity Low_complexity 1 89 0 260 291 98 22 chr10 52257095 52257370 -88059395 - L1MC4a LINE L1 -1880 5928 5633 325 244 9 17 chr10 52257451 52257566 -88059199 - L1MC4a LINE L1 -2386 5422 5309 23 33 0 0 chr10 52257728 52257758 -88059007 + AT_rich Low_complexity Low_complexity 1 30 0 185 250 116 62 chr10 52258537 52258649 -88058116 - MIR SINE MIR -77 185 68 860 182 28 79 chr10 52258986 52259200 -88057565 - MSTD LTR MaLR 0 396 194 510 148 0 0 chr10 52259202 52259317 -88057448 + (GA)n Simple_repeat Simple_repeat 2 116 0 1280 153 4 60 chr10 52259317 52259566 -88057199 - MSTD LTR MaLR -157 239 5 6849 221 60 39 chr10 52259580 52261269 -88055496 - MSTD-int LTR MaLR -11 1724 1 1822 209 7 44 chr10 52261270 52261681 -88055084 - MSTD LTR MaLR 0 396 1 357 208 39 0 chr10 52262288 52262365 -88054400 + MER116 DNA Mariner 1 80 0 659 227 0 0 chr10 52263289 52263421 -88053344 - Tigger7 DNA MER2_type -272 278 147 26 0 0 0 chr10 52264606 52264632 -88052133 + AT_rich Low_complexity Low_complexity 1 26 0 13682 210 30 32 chr10 52265367 52270180 -88046585 - L1MA5A LINE L1 -1 6938 2098 1978 132 4 4 chr10 52270180 52270490 -88046275 - AluSg SINE Alu 0 310 1 13682 210 30 32 chr10 52270490 52271777 -88044988 - L1MA5A LINE L1 -4841 2098 810 568 121 0 0 chr10 52271838 52271921 -88044844 - MSTB LTR MaLR -4 428 346 7935 16 0 0 chr10 52271937 52273376 -88043389 - L1HS LINE L1 0 6155 4717 1888 222 8 6 chr10 52273376 52273727 -88043038 - MSTB LTR MaLR -73 353 2 4576 208 21 12 chr10 52273729 52274628 -88042137 - L1M2c LINE L1 -5816 973 67 411 176 0 0 chr10 52274736 52274810 -88041955 + MER116 DNA Mariner 6 79 -1 21 0 0 0 chr10 52274940 52274961 -88041804 + AT_rich Low_complexity Low_complexity 1 21 0 2364 186 17 0 chr10 52275100 52275519 -88041246 - MSTB LTR MaLR 0 426 1 5393 196 18 9 chr10 52275519 52276529 -88040236 - MSTB-int LTR MaLR 0 1651 633 275 258 0 0 chr10 52276509 52276575 -88040190 - MSTB-int LTR MaLR -1585 66 1 * 1906 147 24 163 chr10 52276575 52277072 -88039693 - MSTB LTR MaLR 0 426 1 738 245 10 56 chr10 52277072 52277268 -88039497 - MER20 DNA MER1_type -32 187 1 21 0 0 0 chr10 52277510 52277531 -88039234 + AT_rich Low_complexity Low_complexity 1 21 0 341 282 0 0 chr10 52278529 52278607 -88038158 - MER112 DNA MER1_type -6 254 177 978 145 0 0 chr10 52278684 52278850 -88037915 + (TA)n Simple_repeat Simple_repeat 2 167 0 808 183 6 44 chr10 52278850 52279030 -88037735 - FRAM SINE Alu -9 167 1 1958 164 30 9 chr10 52279880 52280210 -88036555 + MER1B DNA MER1_type 1 337 0 548 252 145 37 chr10 52280973 52281187 -88035578 - MIR SINE MIR 0 262 26 390 203 134 58 chr10 52281375 52281636 -88035129 - L1MC5 LINE L1 -184 7777 7497 1386 163 20 59 chr10 52281669 52281975 -88034790 - AluJo SINE Alu -18 294 1 607 268 103 13 chr10 52282776 52283000 -88033765 - L1MC5 LINE L1 -1085 6876 6633 33 0 0 0 chr10 52283008 52283041 -88033724 + AT_rich Low_complexity Low_complexity 1 33 0 26 50 0 0 chr10 52283324 52283364 -88033401 + AT_rich Low_complexity Low_complexity 1 40 0 2301 105 0 10 chr10 52283864 52284178 -88032587 + AluSq SINE Alu 1 311 -2 336 154 77 55 chr10 52284695 52284786 -88031979 - HAL1b LINE L1 -22 1326 1234 37 39 0 0 chr10 52286351 52286402 -88030363 + AT_rich Low_complexity Low_complexity 1 51 0 286 138 14 0 chr10 52286616 52286685 -88030080 - Alu SINE Alu -1 307 261 1046 111 12 17 chr10 52286851 52287023 -88029742 - AluYa5 SINE Alu -8 303 133 22 0 10 0 chr10 52287449 52287514 -88029251 + AT_rich Low_complexity Low_complexity 1 22 0 231 222 0 0 chr10 52288398 52288443 -88028322 - MIR3 SINE MIR -41 167 123 779 274 25 8 chr10 52289247 52289488 -88027277 - MLT1D LTR MaLR 0 505 261 267 79 0 0 chr10 52289514 52289552 -88027213 + (TG)n Simple_repeat Simple_repeat 2 39 0 357 153 85 0 chr10 52289604 52289663 -88027102 - MLT1D LTR MaLR -441 64 1 326 183 115 67 chr10 52290644 52290748 -88026017 - MIR SINE MIR -17 245 137 16066 211 25 17 chr10 52290764 52294782 -88021983 - L1PA15 LINE L1 0 6816 2834 1900 123 54 0 chr10 52294782 52295094 -88021671 - AluSx SINE Alu 0 327 1 16066 211 25 17 chr10 52295094 52295142 -88021623 - L1PA15 LINE L1 -3982 2834 2788 4443 163 67 62 chr10 52295142 52296207 -88020558 + MER11C LTR ERVK 2 1071 0 16066 211 25 17 chr10 52296207 52298676 -88018089 - L1PA15 LINE L1 -4028 2788 1 458 233 50 101 chr10 52298698 52298857 -88017908 - MIR SINE MIR -111 151 1 23 0 0 0 chr10 52299508 52299531 -88017234 + AT_rich Low_complexity Low_complexity 1 23 0 1177 236 66 27 chr10 52299852 52300153 -88016612 - MER58B DNA MER1_type -2 339 27 216 285 256 22 chr10 52300351 52300667 -88016098 + L2 LINE L2 2331 2720 -594 304 322 77 0 chr10 52300671 52300814 -88015951 + MIR SINE MIR 71 224 -38 331 297 103 32 chr10 52301098 52301283 -88015482 + L2 LINE L2 3014 3211 -102 198 291 127 0 chr10 52301712 52301767 -88014998 - L2 LINE L2 -2 3270 3209 186 43 0 0 chr10 52302409 52302432 -88014333 + (A)n Simple_repeat Simple_repeat 1 23 0 181 288 136 0 chr10 52302514 52302580 -88014185 + MIR SINE MIR 67 141 -67 2184 165 23 2 chr10 52302726 52303121 -88013644 - MER57A LTR ERV1 0 403 1 204 67 0 0 chr10 52303875 52303905 -88012860 + (TAAAAA)n Simple_repeat Simple_repeat 6 35 0 298 296 67 7 chr10 52305159 52305294 -88011471 + MIR SINE MIR 120 262 0 23 78 0 0 chr10 52305711 52305762 -88011003 + AT_rich Low_complexity Low_complexity 1 51 0 2276 107 3 0 chr10 52305821 52306120 -88010645 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr10 52306414 52306443 -88010322 + AT_rich Low_complexity Low_complexity 1 29 0 273 258 0 0 chr10 52308016 52308109 -88008656 + (TA)n Simple_repeat Simple_repeat 1 93 0 2292 103 3 0 chr10 52308640 52308941 -88007824 + AluSg SINE Alu 1 302 -8 876 283 48 15 chr10 52310851 52311123 -88005642 + MLT1F LTR MaLR 108 388 -154 5342 91 30 4 chr10 52311142 52311901 -88004864 - L1PA13 LINE L1 -22 6141 5363 590 224 8 22 chr10 52311922 52312056 -88004709 + MLT1F LTR MaLR 436 567 0 558 282 143 0 chr10 52313281 52313490 -88003275 + MIR SINE MIR 11 249 -13 3267 309 97 13 chr10 52313709 52315148 -88001617 + L2 LINE L2 1548 3123 -190 5714 148 13 11 chr10 52315161 52315519 -88001246 - L1PB1 LINE L1 -2 6149 5793 348 83 0 0 chr10 52315519 52315567 -88001198 + (TA)n Simple_repeat Simple_repeat 2 49 0 5714 148 13 11 chr10 52315567 52316627 -88000138 - L1PB1 LINE L1 -358 5793 4726 592 150 100 89 chr10 52316634 52316814 -87999951 + L2 LINE L2 3095 3276 -37 1955 144 38 26 chr10 52318028 52318367 -87998398 - MER2 DNA MER2_type -1 343 1 504 293 83 35 chr10 52321080 52321309 -87995456 - MIR SINE MIR 0 262 23 1888 174 0 10 chr10 52321828 52322133 -87994632 + AluJb SINE Alu 1 302 -10 267 31 0 0 chr10 52322133 52322165 -87994600 + (GA)n Simple_repeat Simple_repeat 1 32 0 1978 113 0 0 chr10 52322766 52323041 -87993724 + AluSx SINE Alu 35 309 -3 42865 31 21 1 chr10 52324040 52329947 -87986818 + L1PA2 LINE L1 29 6056 -99 306 310 17 24 chr10 52332079 52332366 -87984399 + AluSx SINE Alu 2 286 -16 295 177 32 0 chr10 52333289 52333351 -87983414 - L3b LINE CR1 -404 1179 1116 474 125 0 0 chr10 52334419 52334503 -87982262 - FLAM_C SINE Alu 0 140 57 262 280 318 0 chr10 52334831 52334963 -87981802 + MER5A DNA MER1_type 10 183 -6 557 299 40 99 chr10 52334970 52335344 -87981421 - L3 LINE CR1 -80 1497 1146 346 271 194 39 chr10 52336504 52336659 -87980106 + MIR SINE MIR 29 207 -55 3720 216 132 25 chr10 52336883 52338090 -87978675 + L1MC4 LINE L1 6492 7994 -1 391 267 89 79 chr10 52338646 52338961 -87977804 - MLT1L LTR MaLR -297 318 1 21 36 0 0 chr10 52339018 52339046 -87977719 + AT_rich Low_complexity Low_complexity 1 28 0 294 177 78 78 chr10 52339071 52339212 -87977553 + MER104 DNA Tc2 5 145 -35 453 282 51 74 chr10 52339287 52339351 -87977414 - MIR SINE MIR -56 206 142 1771 155 28 3 chr10 52339351 52339635 -87977130 - AluSg SINE Alu -19 291 1 453 282 51 74 chr10 52339635 52339786 -87976979 - MIR SINE MIR -120 142 2 208 319 0 64 chr10 52339798 52339892 -87976873 - L2 LINE L2 0 3272 3185 27 49 0 0 chr10 52339917 52339958 -87976807 + AT_rich Low_complexity Low_complexity 1 41 0 901 292 58 6 chr10 52340009 52340334 -87976431 + MLT1I LTR MaLR 60 401 -8 470 265 111 32 chr10 52340394 52340583 -87976182 + MIR SINE MIR 6 209 -53 8082 157 20 13 chr10 52340624 52342436 -87974329 - L1M2 LINE L1 -650 5641 3816 251 238 191 0 chr10 52342568 52342631 -87974134 - MER5A DNA MER1_type -63 126 52 22 0 0 0 chr10 52342866 52342888 -87973877 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr10 52344473 52344508 -87972257 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr10 52345016 52345047 -87971718 + AT_rich Low_complexity Low_complexity 1 31 0 1436 195 39 39 chr10 52346770 52347077 -87969688 - AluJo SINE Alu -5 307 1 272 387 10 23 chr10 52347701 52347843 -87968922 - MIR SINE MIR -63 145 22 785 266 93 13 chr10 52347930 52348167 -87968598 - MIR SINE MIR 0 262 7 3499 116 48 27 chr10 52348807 52348854 -87967911 - L1MB3 LINE L1 -3 6180 6135 1966 130 28 0 chr10 52348854 52349139 -87967626 - AluSx SINE Alu -16 296 4 3499 116 48 27 chr10 52349139 52349711 -87967054 - L1MB3 LINE L1 -48 6135 5548 256 296 0 28 chr10 52350817 52350888 -87965877 - 7SK RNA RNA -124 69 1 1057 250 60 0 chr10 52352129 52352397 -87964368 + MER58 DNA MER1_type 1 284 -2136 446 251 219 5 chr10 52357818 52358005 -87958760 + MIR SINE MIR 36 262 0 2070 120 3 0 chr10 52358490 52358803 -87957962 + AluSx SINE Alu 1 314 0 292 344 71 0 chr10 52359434 52359575 -87957190 - MIR SINE MIR -73 135 33 2506 188 8 16 chr10 52360163 52360673 -87956092 + L1MB2 LINE L1 5666 6171 0 1678 183 18 0 chr10 52361338 52361623 -87955142 + AluJb SINE Alu 1 290 -22 430 203 78 88 chr10 52361635 52361852 -87954913 - MER58 DNA MER1_type -3 2417 2203 666 296 35 132 chr10 52361882 52362624 -87954141 + L2 LINE L2 2065 2734 -580 2239 255 151 15 chr10 52362652 52363852 -87952913 - L2 LINE L2 -5 3308 1939 180 323 40 10 chr10 52363864 52363963 -87952802 + L2 LINE L2 2766 2867 -447 1793 86 43 11 chr10 52364868 52365146 -87951619 + L1PA11 LINE L1 5888 6174 0 308 321 42 63 chr10 52367234 52367424 -87949341 + MIR SINE MIR 4 189 -73 2090 124 0 3 chr10 52367929 52368235 -87948530 - AluSg SINE Alu -5 305 1 33 43 0 0 chr10 52368970 52369017 -87947748 + AT_rich Low_complexity Low_complexity 1 47 0 309 339 79 6 chr10 52370814 52370979 -87945786 - MER69A DNA AcHobo 0 177 1 539 195 89 6 chr10 52371071 52371240 -87945525 + MER53 DNA DNA 3 185 -4 26 0 0 0 chr10 52371395 52371421 -87945344 + AT_rich Low_complexity Low_complexity 1 26 0 1935 142 0 3 chr10 52372743 52373048 -87943717 + AluSx SINE Alu 3 306 0 30 59 0 0 chr10 52373340 52373391 -87943374 + AT_rich Low_complexity Low_complexity 1 51 0 200 208 0 14 chr10 52373407 52373479 -87943286 + (TA)n Simple_repeat Simple_repeat 1 71 0 216 220 18 133 chr10 52373558 52373781 -87942984 - MER5C DNA MER1_type 0 324 6 422 301 9 9 chr10 52374543 52374656 -87942109 - L2 LINE L2 0 3272 3160 596 302 78 25 chr10 52375314 52375559 -87941206 - MIR SINE MIR 0 262 5 196 281 65 85 chr10 52376718 52376871 -87939894 - L2 LINE L2 0 3272 3123 3170 113 147 4 chr10 52377101 52377624 -87939141 - LTR18B LTR ERVL -15 599 2 432 295 54 32 chr10 52377717 52377976 -87938789 - MLT1K LTR MaLR -354 261 8 427 326 73 53 chr10 52378435 52378680 -87938085 - MIR SINE MIR -1 261 12 472 287 105 14 chr10 52379168 52379377 -87937388 + MIR SINE MIR 35 262 0 864 213 0 71 chr10 52379837 52380004 -87936761 + MER20 DNA MER1_type 23 174 -45 1931 136 3 29 chr10 52380004 52380314 -87936451 + AluSp SINE Alu 1 302 -11 864 213 0 71 chr10 52380314 52380357 -87936408 + MER20 DNA MER1_type 174 218 -1 210 105 0 0 chr10 52380410 52380448 -87936317 + (A)n Simple_repeat Simple_repeat 1 38 0 1794 133 91 7 chr10 52381554 52381840 -87934925 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 52382497 52382518 -87934247 + AT_rich Low_complexity Low_complexity 1 21 0 2224 130 0 0 chr10 52382679 52382987 -87933778 - AluSg SINE Alu -2 308 1 254 135 0 0 chr10 52383245 52383282 -87933483 + AluJb SINE Alu 1 37 -264 1689 184 3 0 chr10 52383284 52383578 -87933187 + AluJb SINE Alu 15 309 -3 346 288 71 9 chr10 52383628 52383840 -87932925 + L1MC4a LINE L1 5673 5897 -1911 529 236 40 29 chr10 52383972 52384146 -87932619 + MER3 DNA MER1_type 34 209 0 606 147 22 7 chr10 52384335 52384471 -87932294 + MER3 DNA MER1_type 2446 2583 0 240 289 52 62 chr10 52384481 52384578 -87932187 + MIR SINE MIR 38 133 -75 267 318 57 38 chr10 52385060 52385271 -87931494 + L2 LINE L2 1787 2001 -1313 * 654 250 26 0 chr10 52385270 52385422 -87931343 + MER5A DNA MER1_type 34 189 0 3727 113 5 22 chr10 52385873 52386458 -87930307 + L1PA16 LINE L1 5590 6164 -2 2110 117 0 16 chr10 52386932 52387241 -87929524 + AluSx SINE Alu 1 304 -8 206 180 33 98 chr10 52387657 52387718 -87929047 - MIR SINE MIR -90 172 116 205 257 29 86 chr10 52387728 52387798 -87928967 - MIR SINE MIR -81 181 116 190 232 43 87 chr10 52387808 52387877 -87928888 - MIR SINE MIR -81 181 116 782 242 21 5 chr10 52387966 52388152 -87928613 - MER5A DNA MER1_type 0 189 1 444 237 216 7 chr10 52388278 52388417 -87928348 - MER5A DNA MER1_type 0 189 22 935 212 16 0 chr10 52388425 52388609 -87928156 + MER5A DNA MER1_type 1 187 -2 697 220 54 0 chr10 52388620 52388788 -87927977 - MER5B DNA MER1_type 0 178 2 200 240 8 198 chr10 52388817 52388876 -87927889 + MER5A DNA MER1_type 9 78 -111 2215 125 46 46 chr10 52388876 52388927 -87927838 + L1MA4 LINE L1 5859 5909 -391 2090 130 3 0 chr10 52388927 52389234 -87927531 + AluSx SINE Alu 1 308 -4 2215 125 46 46 chr10 52389234 52389551 -87927214 + L1MA4 LINE L1 5909 6230 -70 1986 153 34 0 chr10 52389551 52389877 -87926888 + MER1B DNA MER1_type 1 337 0 2215 125 46 46 chr10 52389877 52389938 -87926827 + L1MA4 LINE L1 6229 6289 -11 200 240 8 198 chr10 52389938 52389999 -87926766 + MER5A DNA MER1_type 78 106 -83 1105 153 74 0 chr10 52390070 52390259 -87926506 + MER3 DNA MER1_type 1 203 -6 1982 175 39 32 chr10 52390881 52391428 -87925337 - MLT2A2 LTR ERVL 0 554 1 2369 91 0 3 chr10 52392123 52392431 -87924334 - AluSx SINE Alu -5 307 1 379 295 140 30 chr10 52392455 52392655 -87924110 + MIR SINE MIR 41 262 0 5106 75 16 10 chr10 52392801 52393485 -87923280 + LTR8 LTR ERV1 1 688 -3 311 268 101 95 chr10 52393970 52394068 -87922697 - MLT1K LTR MaLR -6 582 486 2207 109 3 3 chr10 52394068 52394372 -87922393 + AluSc SINE Alu 1 304 -5 311 268 101 95 chr10 52394372 52394579 -87922186 - MLT1K LTR MaLR -102 486 275 332 149 15 30 chr10 52394620 52394687 -87922078 + L2 LINE L2 3187 3252 -61 226 220 20 0 chr10 52394746 52394796 -87921969 - MLT1K LTR MaLR -357 231 181 204 217 43 0 chr10 52395524 52395593 -87921172 + (TA)n Simple_repeat Simple_repeat 1 72 0 554 303 29 6 chr10 52396234 52396409 -87920356 - L2 LINE L2 -3 3310 3132 2351 106 6 0 chr10 52396740 52397051 -87919714 - AluSp SINE Alu 0 313 1 2861 162 115 57 chr10 52397095 52397782 -87918983 - LTR8A LTR ERV1 0 727 1 30 45 0 0 chr10 52399212 52399256 -87917509 + AT_rich Low_complexity Low_complexity 1 44 0 2161 116 3 0 chr10 52400605 52400897 -87915868 + AluSx SINE Alu 1 293 -19 448 285 131 19 chr10 52401142 52401356 -87915409 - Charlie8 DNA MER1_type -2179 238 1 200 321 62 12 chr10 52401493 52401574 -87915191 + L2 LINE L2 3214 3298 -15 204 337 11 11 chr10 52401641 52401736 -87915029 + L3b LINE CR1 1146 1240 -343 231 36 0 0 chr10 52401788 52401816 -87914949 + (TG)n Simple_repeat Simple_repeat 1 28 0 3719 260 102 10 chr10 52402224 52403529 -87913236 + L1MC4 LINE L1 6459 7883 -159 1673 96 105 0 chr10 52404581 52404820 -87911945 + AluY SINE Alu 38 301 -10 411 268 81 89 chr10 52409264 52409384 -87907381 - MIR SINE MIR -14 248 129 906 218 136 33 chr10 52409384 52409714 -87907051 - MLT1A1 LTR MaLR -1 364 1 411 268 81 89 chr10 52409714 52409839 -87906926 - MIR SINE MIR -133 129 5 2327 90 0 3 chr10 52409850 52410151 -87906614 - AluSc SINE Alu -9 300 1 401 326 30 30 chr10 52410224 52410359 -87906406 + L2 LINE L2 3137 3271 -1 1740 148 7 11 chr10 52410652 52410930 -87905835 + AluJb SINE Alu 1 277 -35 8805 211 12 10 chr10 52410967 52413061 -87903704 + L1PA15 LINE L1 3298 5397 -749 7725 21 0 1 chr10 52413062 52414244 -87902521 + L1PA3 LINE L1 4966 6155 0 4661 126 11 20 chr10 52414249 52415009 -87901756 + L1PA15 LINE L1 5413 6165 0 1316 252 125 21 chr10 52415091 52415583 -87901182 - MLT1F1 LTR MaLR -6 561 30 378 0 0 0 chr10 52417223 52417265 -87899500 + (TG)n Simple_repeat Simple_repeat 2 43 0 391 343 87 73 chr10 52417275 52417466 -87899299 - L3 LINE CR1 -20 1557 1370 2212 168 12 66 chr10 52417466 52417774 -87898991 + MER65C LTR ERV1 1 276 -185 2140 100 7 0 chr10 52417774 52418074 -87898691 - AluSx SINE Alu 0 302 1 2212 168 12 66 chr10 52418074 52418251 -87898514 + MER65C LTR ERV1 276 461 0 391 343 87 73 chr10 52418251 52418572 -87898193 - L3 LINE CR1 -207 1370 1034 2162 112 41 46 chr10 52418572 52418938 -87897827 - THE1B LTR MaLR 0 364 1 391 343 87 73 chr10 52418938 52418999 -87897766 - L3 LINE CR1 -543 1034 975 2094 109 0 0 chr10 52419608 52419933 -87896832 - AluSx SINE Alu 0 325 1 313 253 111 38 chr10 52420412 52420535 -87896230 - MIR SINE MIR -75 133 3 2083 95 22 0 chr10 52422632 52422906 -87893859 + AluSq SINE Alu 1 280 -33 180 0 0 0 chr10 52422906 52422926 -87893839 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 237 33 0 0 chr10 52422926 52422956 -87893809 + (CAA)n Simple_repeat Simple_repeat 2 31 0 26 64 0 0 chr10 52423757 52423804 -87892961 + AT_rich Low_complexity Low_complexity 1 47 0 2344 68 31 0 chr10 52425136 52425430 -87891335 - AluSc SINE Alu -6 303 1 347 316 14 50 chr10 52427286 52427425 -87889340 - MIR3 SINE MIR 0 208 75 22 0 0 0 chr10 52428617 52428639 -87888126 + AT_rich Low_complexity Low_complexity 1 22 0 212 269 0 45 chr10 52430085 52430152 -87886613 + T-rich Low_complexity Low_complexity 1 64 0 318 258 46 54 chr10 52430603 52430846 -87885919 + L1MC4 LINE L1 7546 7890 -152 21 0 0 0 chr10 52430926 52430947 -87885818 + AT_rich Low_complexity Low_complexity 1 21 0 264 179 51 0 chr10 52431043 52431160 -87885605 + (TA)n Simple_repeat Simple_repeat 2 124 0 30 45 0 0 chr10 52431178 52431222 -87885543 + AT_rich Low_complexity Low_complexity 1 44 0 25 51 0 0 chr10 52432007 52432046 -87884719 + AT_rich Low_complexity Low_complexity 1 39 0 547 349 16 0 chr10 52432500 52432692 -87884073 - MIR SINE MIR -23 239 45 254 320 93 0 chr10 52433683 52433780 -87882985 + L3 LINE CR1 388 493 -1084 337 304 36 18 chr10 52433933 52434045 -87882720 - MER91B DNA MER1_type -67 123 10 2101 113 48 0 chr10 52434151 52434443 -87882322 + AluSx SINE Alu 1 306 -6 225 0 0 0 chr10 52434585 52434610 -87882155 + (CA)n Simple_repeat Simple_repeat 2 26 0 204 40 0 0 chr10 52435104 52435129 -87881636 + (T)n Simple_repeat Simple_repeat 1 25 0 564 281 42 65 chr10 52435207 52435467 -87881298 + MIR SINE MIR 6 259 -3 458 231 15 39 chr10 52435489 52435619 -87881146 - MER46C DNA MER2_type -6 332 206 231 337 30 72 chr10 52435841 52435946 -87880819 - MER5A DNA MER1_type -25 164 67 2119 127 16 3 chr10 52435946 52436253 -87880512 + AluSq SINE Alu 1 311 -2 231 337 30 72 chr10 52436253 52436313 -87880452 - MER5A DNA MER1_type -122 67 6 1675 115 13 0 chr10 52436771 52437380 -87879385 + L1PA13 LINE L1 5499 6162 -1 227 256 0 83 chr10 52437380 52437501 -87879264 - L1MC4 LINE L1 -934 7108 6998 2576 39 0 10 chr10 52438140 52438446 -87878319 + AluY SINE Alu 2 304 -7 201 143 0 0 chr10 52439408 52439443 -87877322 + (TG)n Simple_repeat Simple_repeat 2 36 0 1257 216 89 27 chr10 52442142 52442623 -87874142 + L1M4 LINE L1 4882 5392 -754 26556 123 13 71 chr10 52442638 52447905 -87868860 + L1P LINE L1 12 4974 -1172 1884 164 3 0 chr10 52448073 52448360 -87868405 + AluSx SINE Alu 1 288 -24 226 250 0 0 chr10 52449473 52449525 -87867240 - L2 LINE L2 -1 3271 3220 1047 193 0 5 chr10 52449691 52449878 -87866887 + AluJo SINE Alu 122 307 -5 2123 119 0 19 chr10 52449901 52450211 -87866554 + AluSq SINE Alu 1 304 -9 231 61 0 0 chr10 52450476 52450509 -87866256 + (CA)n Simple_repeat Simple_repeat 2 34 0 2259 128 0 0 chr10 52451155 52451467 -87865298 - AluSq SINE Alu -1 312 1 592 243 61 99 chr10 52451512 52451775 -87864990 + MIR SINE MIR 10 262 0 41878 41 3 1 chr10 52451965 52458109 -87858656 + L1PA3 LINE L1 1 6155 0 320 316 7 39 chr10 52458807 52458962 -87857803 + MIR SINE MIR 2 151 -111 316 239 157 8 chr10 52459590 52459724 -87857041 + MIR SINE MIR 95 248 -14 291 54 0 0 chr10 52462043 52462080 -87854685 + (GA)n Simple_repeat Simple_repeat 2 38 0 333 0 0 0 chr10 52462080 52462117 -87854648 + (TG)n Simple_repeat Simple_repeat 1 37 0 275 326 93 8 chr10 52463379 52463508 -87853257 - MIR SINE MIR -10 252 113 22 56 0 0 chr10 52464589 52464625 -87852140 + AT_rich Low_complexity Low_complexity 1 36 0 266 239 77 51 chr10 52464763 52464880 -87851885 - MIR SINE MIR -72 190 71 30 0 0 0 chr10 52465392 52465422 -87851343 + AT_rich Low_complexity Low_complexity 1 30 0 541 309 30 39 chr10 52465994 52466227 -87850538 - MIR SINE MIR -3 259 29 23 0 0 0 chr10 52466997 52467020 -87849745 + AT_rich Low_complexity Low_complexity 1 23 0 1122 220 89 30 chr10 52467089 52467426 -87849339 - MLT1A2 LTR MaLR -17 357 1 234 320 186 10 chr10 52468560 52468657 -87848108 - L2 LINE L2 -42 3230 3117 602 258 133 55 chr10 52468705 52469050 -87847715 + MLT1H1 LTR MaLR 2 373 -182 581 258 41 68 chr10 52469056 52469473 -87847292 + MER57A LTR ERV1 19 403 0 702 169 8 0 chr10 52469518 52469642 -87847123 + MLT1H1 LTR MaLR 430 554 -1 6163 179 110 3 chr10 52469657 52470901 -87845864 - MER52A LTR ERV1 0 1755 379 1711 162 4 0 chr10 52471996 52472274 -87844491 - AluSx SINE Alu -32 280 2 23 0 0 0 chr10 52472826 52472849 -87843916 + AT_rich Low_complexity Low_complexity 1 23 0 446 210 8 0 chr10 52473026 52473145 -87843620 + (CATATA)n Simple_repeat Simple_repeat 3 122 0 243 286 13 0 chr10 52473152 52473229 -87843536 + (TA)n Simple_repeat Simple_repeat 2 79 0 25 0 0 0 chr10 52473607 52473632 -87843133 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr10 52474095 52474131 -87842634 + AT_rich Low_complexity Low_complexity 1 36 0 210 143 0 0 chr10 52474833 52474868 -87841897 + (CAT)n Simple_repeat Simple_repeat 3 37 0 336 318 86 34 chr10 52474872 52475105 -87841660 - MIR SINE MIR -5 257 13 394 245 31 92 chr10 52475266 52475311 -87841454 + MIR SINE MIR 79 125 -137 2164 114 16 3 chr10 52475311 52475618 -87841147 - AluSq SINE Alu -2 311 1 394 245 31 92 chr10 52475618 52475768 -87840997 + MIR SINE MIR 125 262 0 231 360 7 44 chr10 52476621 52476757 -87840008 - MER5A DNA MER1_type -10 179 49 980 154 48 43 chr10 52476764 52476972 -87839793 - L1PA16 LINE L1 0 6166 5958 1149 214 22 50 chr10 52476972 52477336 -87839429 + L1P LINE L1 5050 5403 -743 209 152 0 0 chr10 52477340 52477373 -87839392 + MER5A DNA MER1_type 157 189 0 24 0 0 0 chr10 52478064 52478088 -87838677 + AT_rich Low_complexity Low_complexity 1 24 0 2516 151 15 11 chr10 52478099 52478557 -87838208 - L1MB2 LINE L1 -27 6144 5685 1347 189 52 61 chr10 52478665 52479008 -87837757 + MER58B DNA MER1_type 2 341 0 442 250 123 41 chr10 52479521 52479741 -87837024 - MIR SINE MIR -10 252 15 604 323 5 5 chr10 52480679 52480868 -87835897 + MIR SINE MIR 2 190 -72 2417 82 0 3 chr10 52481867 52482170 -87834595 - AluSq SINE Alu -11 302 1 213 39 0 0 chr10 52482856 52482882 -87833883 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 238 368 80 8 chr10 52483454 52483579 -87833186 - MER5A DNA MER1_type -18 171 38 260 194 30 0 chr10 52483886 52483953 -87832812 + L1ME LINE L1 5524 5592 -529 351 177 0 0 chr10 52484390 52484452 -87832313 + FLAM SINE Alu 69 130 -3 2278 94 0 23 chr10 52485346 52485654 -87831111 - AluSg SINE Alu -9 301 1 755 234 6 6 chr10 52485872 52486047 -87830718 + MER5B DNA MER1_type 1 175 -3 200 159 0 12 chr10 52486523 52486611 -87830154 + GA-rich Low_complexity Low_complexity 1 86 0 265 75 0 0 chr10 52486729 52486769 -87829996 - L1PA3 LINE L1 -7 6148 6109 659 263 23 17 chr10 52487348 52487523 -87829242 + MER5B DNA MER1_type 3 178 0 1846 103 3 55 chr10 52488094 52488385 -87828380 + AluY SINE Alu 1 276 -35 189 0 0 0 chr10 52488385 52488406 -87828359 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 443 259 81 32 chr10 52488513 52488698 -87828067 - L2 LINE L2 -4 3309 3116 240 343 63 46 chr10 52489025 52489200 -87827565 + MIR SINE MIR 66 243 -19 354 282 72 33 chr10 52489281 52489462 -87827303 - MER5A DNA MER1_type 0 189 2 242 114 0 23 chr10 52490391 52490435 -87826330 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 1752 151 0 0 chr10 52490437 52490695 -87826070 - AluSx SINE Alu 0 312 55 796 309 17 0 chr10 52490870 52491103 -87825662 + MIR SINE MIR 12 248 -14 211 213 0 43 chr10 52491192 52491239 -87825526 - L2 LINE L2 -15 3298 3254 27 29 0 0 chr10 52491429 52491463 -87825302 + AT_rich Low_complexity Low_complexity 1 34 0 301 242 113 0 chr10 52491475 52491599 -87825166 - MLT1J1 LTR MaLR -55 391 254 543 116 214 0 chr10 52491670 52491782 -87824983 - MLT1J2 LTR MaLR -314 136 1 22 0 0 0 chr10 52491842 52491864 -87824901 + AT_rich Low_complexity Low_complexity 1 22 0 2142 128 0 0 chr10 52492762 52493066 -87823699 - AluSx SINE Alu -8 304 1 2273 132 0 0 chr10 52493279 52493590 -87823175 + AluSx SINE Alu 1 311 -1 278 250 157 33 chr10 52493812 52494020 -87822745 - L1MC/D LINE L1 -488 5633 5507 13269 149 45 10 chr10 52494038 52496220 -87820545 - Tigger1 DNA MER2_type 0 2418 147 2624 30 0 0 chr10 52496220 52496518 -87820247 - AluY SINE Alu -13 298 1 13269 149 45 10 chr10 52496518 52496670 -87820095 - Tigger1 DNA MER2_type -2271 147 2 21 36 0 0 chr10 52497342 52497370 -87819395 + AT_rich Low_complexity Low_complexity 1 28 0 204 325 24 24 chr10 52498127 52498210 -87818555 - MIR SINE MIR -173 89 7 518 224 90 50 chr10 52499117 52499318 -87817447 + L1MC4a LINE L1 5706 5914 -1894 26 0 0 0 chr10 52500419 52500445 -87816320 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr10 52505292 52505316 -87811449 + AT_rich Low_complexity Low_complexity 1 24 0 1932 151 6 28 chr10 52507410 52507728 -87809037 - AluJb SINE Alu -1 311 1 198 263 0 0 chr10 52507745 52507802 -87808963 + CT-rich Low_complexity Low_complexity 4 60 0 203 146 24 0 chr10 52508722 52508763 -87808002 + CT-rich Low_complexity Low_complexity 1 42 0 294 29 0 0 chr10 52508962 52508997 -87807768 + (TG)n Simple_repeat Simple_repeat 1 35 0 1584 169 13 42 chr10 52511606 52511913 -87804852 + AluJo SINE Alu 1 298 -14 2299 93 0 10 chr10 52511917 52512219 -87804546 + AluSq SINE Alu 1 299 -14 1485 186 29 7 chr10 52512240 52512514 -87804251 - MLT2B2 LTR ERVL -233 282 3 591 194 68 81 chr10 52512514 52512607 -87804158 + MER63 DNA MER1_type 730 823 -239 1445 183 6 71 chr10 52512607 52512930 -87803835 - AluJo SINE Alu 0 302 1 591 194 68 81 chr10 52512930 52513079 -87803686 + MER63 DNA MER1_type 823 969 -93 411 83 0 0 chr10 52513336 52513396 -87803369 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 362 320 86 29 chr10 52513478 52513702 -87803063 - L1ME1 LINE L1 -233 5933 5723 378 0 0 0 chr10 52513702 52513744 -87803021 + (TA)n Simple_repeat Simple_repeat 2 43 0 362 320 86 29 chr10 52513744 52514038 -87802727 - L1ME1 LINE L1 -443 5723 5374 1305 188 20 16 chr10 52514179 52514424 -87802341 + AluJo SINE Alu 42 287 -25 340 333 32 32 chr10 52514439 52514625 -87802140 + L1M4 LINE L1 3739 3924 -2222 376 256 93 54 chr10 52514718 52514961 -87801804 + L1M4 LINE L1 4067 4322 -1824 2032 122 10 3 chr10 52514961 52515257 -87801508 + AluSx SINE Alu 1 298 -14 376 256 93 54 chr10 52515257 52515271 -87801494 + L1M4 LINE L1 4322 4334 -1812 403 293 58 5 chr10 52515393 52515581 -87801184 + L1M4 LINE L1 4518 4715 -1431 387 317 0 0 chr10 52515723 52515903 -87800862 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 275 131 0 66 chr10 52515903 52515964 -87800801 + LTR57-int LTR ERVL 881 937 -4406 230 222 56 0 chr10 52515968 52516040 -87800725 - L1MC3 LINE L1 -1139 6646 6571 227 269 0 43 chr10 52515984 52516077 -87800688 + L1MC4 LINE L1 6614 6702 -1340 * 231 282 47 0 chr10 52516084 52516169 -87800596 - L1MC4 LINE L1 -1339 6703 6615 829 226 111 0 chr10 52516453 52516652 -87800113 - MER58A DNA MER1_type 0 224 4 751 283 81 33 chr10 52517315 52517622 -87799143 - MLT1I LTR MaLR 0 409 88 256 298 135 35 chr10 52518070 52518211 -87798554 + MER5A DNA MER1_type 35 189 0 903 206 0 0 chr10 52518555 52518710 -87798055 + AluJb SINE Alu 131 285 -27 30 0 0 0 chr10 52522946 52522976 -87793789 + AT_rich Low_complexity Low_complexity 1 30 0 263 260 0 0 chr10 52523149 52523222 -87793543 + T-rich Low_complexity Low_complexity 1 73 0 291 320 124 21 chr10 52524603 52524700 -87792065 - L2 LINE L2 -20 3252 3146 6977 23 1 0 chr10 52524803 52525625 -87791140 - L1PA3 LINE L1 -1416 4730 3908 7432 25 3 11 chr10 52525625 52527050 -87789715 + L1PA3 LINE L1 4738 6155 0 21 0 0 0 chr10 52527050 52527071 -87789694 + AT_rich Low_complexity Low_complexity 1 21 0 2149 116 7 7 chr10 52527084 52527394 -87789371 + AluSx SINE Alu 1 310 -2 1316 170 4 78 chr10 52527429 52527699 -87789066 - AluJo SINE Alu -13 299 50 553 262 93 126 chr10 52529961 52530445 -87786320 + L2 LINE L2 2835 3302 -11 207 0 0 0 chr10 52530583 52530606 -87786159 + (T)n Simple_repeat Simple_repeat 1 23 0 1456 256 116 42 chr10 52531414 52532224 -87784541 - HAL1b LINE L1 -210 1138 269 345 269 104 53 chr10 52533899 52534207 -87782558 - L1 LINE L1 -3050 3096 2764 186 167 0 0 chr10 52534499 52534535 -87782230 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 356 200 71 12 chr10 52534813 52534898 -87781867 - MIR SINE MIR -8 254 165 184 402 12 0 chr10 52534990 52535072 -87781693 + L2 LINE L2 2565 2647 -667 968 89 0 27 chr10 52537843 52537989 -87778776 - AluSq SINE Alu -158 155 14 330 244 23 76 chr10 52538064 52538195 -87778570 - MIR SINE MIR -119 143 20 190 183 56 8 chr10 52538672 52538798 -87777967 + (TA)n Simple_repeat Simple_repeat 1 132 0 237 33 0 0 chr10 52538824 52538854 -87777911 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr10 52539530 52539551 -87777214 + AT_rich Low_complexity Low_complexity 1 21 0 203 327 20 113 chr10 52540324 52540474 -87776291 + L2 LINE L2 3132 3267 -5 309 274 65 52 chr10 52540548 52540701 -87776064 - MIR SINE MIR -7 255 101 253 156 0 22 chr10 52541103 52541148 -87775617 - MIR SINE MIR -27 235 192 23 33 0 0 chr10 52542836 52542866 -87773899 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 52543217 52543245 -87773520 + AT_rich Low_complexity Low_complexity 1 28 0 215 98 66 33 chr10 52544238 52544299 -87772466 + GA-rich Low_complexity Low_complexity 1 63 0 357 24 0 0 chr10 52544720 52544762 -87772003 + (TA)n Simple_repeat Simple_repeat 2 43 0 243 232 37 12 chr10 52544778 52544860 -87771905 - L1MC4 LINE L1 -1338 6704 6621 27 0 0 0 chr10 52545207 52545234 -87771531 + AT_rich Low_complexity Low_complexity 1 27 0 342 123 0 0 chr10 52545518 52545575 -87771190 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 216 0 0 0 chr10 52546312 52546336 -87770429 + (TG)n Simple_repeat Simple_repeat 2 25 0 4280 94 14 24 chr10 52546759 52547417 -87769348 + L1PB2 LINE L1 5499 6149 -2 336 174 337 0 chr10 52547603 52547695 -87769070 + MER5C DNA MER1_type 2 124 -200 2176 95 3 0 chr10 52548023 52548344 -87768421 + AluSp SINE Alu 1 322 0 636 211 84 0 chr10 52548776 52548966 -87767799 + MER5C DNA MER1_type 119 324 0 420 271 179 29 chr10 52549158 52549431 -87767334 + L2 LINE L2 2443 2756 -558 673 309 133 33 chr10 52549468 52549830 -87766935 + L2 LINE L2 2916 3313 0 911 180 5 16 chr10 52550788 52550982 -87765783 + L1PA14 LINE L1 5961 6152 -9 531 308 8 0 chr10 52551625 52551755 -87765010 - MIR SINE MIR -116 146 16 2002 126 0 3 chr10 52551883 52552204 -87764561 - AluSx SINE Alu 0 320 1 1523 165 54 57 chr10 52552294 52552682 -87764083 - MLT1B LTR MaLR -3 387 1 234 0 0 0 chr10 52553084 52553110 -87763655 + (A)n Simple_repeat Simple_repeat 1 26 0 255 250 42 0 chr10 52553612 52553684 -87763081 - MIR SINE MIR -56 206 132 1015 156 44 6 chr10 52553694 52553874 -87762891 - MER20 DNA MER1_type 0 219 33 264 247 62 25 chr10 52553894 52553975 -87762790 - MIR SINE MIR -142 120 37 306 370 148 7 chr10 52554032 52554465 -87762300 + L2 LINE L2 2190 2683 -631 240 304 200 9 chr10 52555158 52555273 -87761492 + L1ME4a LINE L1 5495 5631 -2177 203 335 103 19 chr10 52555459 52555614 -87761151 + MIR SINE MIR 26 193 -69 253 257 219 9 chr10 52555756 52555861 -87760904 + L1ME4a LINE L1 5986 6112 -9 25 0 0 0 chr10 52556884 52556909 -87759856 + AT_rich Low_complexity Low_complexity 1 25 0 2109 118 3 19 chr10 52557227 52557542 -87759223 - AluSx SINE Alu -2 310 1 446 262 196 34 chr10 52558221 52558612 -87758153 + LTR41 LTR ERVL 11 581 -192 * 915 170 22 67 chr10 52558577 52558800 -87757965 + MER20 DNA MER1_type 7 219 0 511 199 53 121 chr10 52558864 52559070 -87757695 + LTR41 LTR ERVL 576 767 -6 183 80 0 0 chr10 52559080 52559105 -87757660 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 337 309 43 11 chr10 52559113 52559207 -87757558 - L2 LINE L2 -22 3250 3154 284 338 97 14 chr10 52559814 52559959 -87756806 + MIR3 SINE MIR 20 176 -32 356 284 32 0 chr10 52560145 52560240 -87756525 + MER58B DNA MER1_type 244 341 0 1554 223 12 3 chr10 52561882 52562219 -87754546 + MER58B DNA MER1_type 1 340 -1 184 189 27 0 chr10 52562871 52562908 -87753857 + L2 LINE L2 3186 3223 -49 1787 181 20 15 chr10 52564239 52564581 -87752184 - MER2 DNA MER2_type 0 344 1 22 35 0 0 chr10 52564647 52564676 -87752089 + AT_rich Low_complexity Low_complexity 1 29 0 431 317 81 16 chr10 52565318 52565504 -87751261 - MIR SINE MIR -11 251 54 218 302 58 12 chr10 52567023 52567109 -87749656 + L2 LINE L2 3181 3270 -2 557 266 68 16 chr10 52567810 52568002 -87748763 - MIR SINE MIR 0 262 61 1568 108 39 4 chr10 52568993 52569252 -87747513 + L1MA1 LINE L1 6030 6297 -5 27 29 0 0 chr10 52569276 52569310 -87747455 + AT_rich Low_complexity Low_complexity 1 34 0 22 80 0 0 chr10 52569342 52569392 -87747373 + AT_rich Low_complexity Low_complexity 1 50 0 232 203 76 13 chr10 52569543 52569622 -87747143 - L1 LINE L1 -1316 4830 4747 413 338 79 40 chr10 52569698 52570154 -87746611 - L1 LINE L1 -1426 4720 4247 245 303 104 76 chr10 52570154 52570220 -87746545 + L2 LINE L2 2820 2883 -430 1949 89 110 0 chr10 52570220 52570501 -87746264 - AluSq SINE Alu -1 312 1 245 303 104 76 chr10 52570501 52570866 -87745899 + L2 LINE L2 2883 3263 -50 372 171 163 31 chr10 52571011 52571140 -87745625 + MIR SINE MIR 117 262 0 339 299 229 25 chr10 52571932 52572133 -87744632 - MIR SINE MIR -1 261 20 1864 116 83 0 chr10 52574088 52574364 -87742401 - AluSg SINE Alu -11 299 1 4423 48 11 2 chr10 52574365 52574996 -87741769 - L1PA7 LINE L1 -326 5828 5192 843 234 59 18 chr10 52575324 52575546 -87741219 + MIR SINE MIR 21 251 -11 5713 220 8 8 chr10 52576692 52578026 -87738739 + L1PB1 LINE L1 4020 5353 -793 2778 99 63 2 chr10 52578126 52578551 -87738214 + L1PB1 LINE L1 5340 5790 -361 203 157 0 57 chr10 52578557 52578627 -87738138 + (TA)n Simple_repeat Simple_repeat 2 67 0 2269 136 5 5 chr10 52578628 52578996 -87737769 + L1PB1 LINE L1 5784 6151 0 371 281 34 0 chr10 52579213 52579302 -87737463 + L2 LINE L2 3188 3279 -34 21 36 0 0 chr10 52580288 52580316 -87736449 + AT_rich Low_complexity Low_complexity 1 28 0 5656 29 0 0 chr10 52582243 52582908 -87733857 - L1PA4 LINE L1 -3 6152 5488 218 253 133 96 chr10 52584084 52584250 -87732515 + MIR SINE MIR 20 191 -71 298 298 21 99 chr10 52584333 52584474 -87732291 - MIR SINE MIR -67 141 12 546 263 61 92 chr10 52585198 52585655 -87731110 + L1ME4a LINE L1 5676 6118 -3 22 0 0 0 chr10 52585927 52585949 -87730816 + AT_rich Low_complexity Low_complexity 1 22 0 297 0 0 0 chr10 52586049 52586082 -87730683 + (ATG)n Simple_repeat Simple_repeat 2 34 0 292 360 7 39 chr10 52586262 52586415 -87730350 + MIR SINE MIR 1 148 -114 2494 80 14 16 chr10 52586544 52586908 -87729857 + L1PA10 LINE L1 5798 6160 -8 234 0 0 0 chr10 52586911 52586937 -87729828 + (TAA)n Simple_repeat Simple_repeat 2 27 0 745 154 40 7 chr10 52586938 52587087 -87729678 + L1MC3 LINE L1 7623 7776 -9 289 304 130 56 chr10 52587896 52588057 -87728708 + MIR3 SINE MIR 35 207 -1 699 224 121 39 chr10 52589215 52589255 -87727510 + L1MB7 LINE L1 5934 5969 -215 1777 151 24 3 chr10 52589255 52589547 -87727218 + AluJb SINE Alu 1 298 -14 699 224 121 39 chr10 52589547 52589738 -87727027 + L1MB7 LINE L1 5969 6184 0 1828 153 23 65 chr10 52590101 52590453 -87726312 - MER2 DNA MER2_type 0 345 9 2175 133 3 0 chr10 52590557 52590865 -87725900 + AluSx SINE Alu 3 311 -1 210 37 0 0 chr10 52591634 52591661 -87725104 + (CA)n Simple_repeat Simple_repeat 2 28 0 23 33 0 0 chr10 52592119 52592149 -87724616 + AT_rich Low_complexity Low_complexity 1 30 0 352 103 0 17 chr10 52592896 52592954 -87723811 + L1PB3 LINE L1 6091 6147 -7 246 98 24 0 chr10 52593082 52593123 -87723642 + L1MEc LINE L1 1621 1662 -4734 184 360 75 20 chr10 52594556 52594703 -87722062 + MIR SINE MIR 62 216 -46 27 29 0 0 chr10 52594731 52594765 -87722000 + AT_rich Low_complexity Low_complexity 1 34 0 224 364 121 14 chr10 52594896 52595036 -87721729 + L2 LINE L2 3082 3236 -36 24 32 0 0 chr10 52596106 52596137 -87720628 + AT_rich Low_complexity Low_complexity 1 31 0 242 54 0 27 chr10 52596963 52597000 -87719765 + (TA)n Simple_repeat Simple_repeat 1 36 0 218 189 0 0 chr10 52598375 52598412 -87718353 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 241 186 0 17 chr10 52599369 52599428 -87717337 + T-rich Low_complexity Low_complexity 2 59 0 1044 141 0 38 chr10 52600758 52600943 -87715822 - AluSg/x SINE Alu -1 309 132 478 279 29 23 chr10 52601090 52601262 -87715503 + MER5B DNA MER1_type 2 174 -4 265 151 19 19 chr10 52601674 52601727 -87715038 + L1M4 LINE L1 4702 4754 -1392 449 112 20 31 chr10 52602010 52602108 -87714657 + GA-rich Low_complexity Low_complexity 1 97 0 3489 117 4 4 chr10 52602679 52603190 -87713575 + MER9 LTR ERVK 1 511 0 30 27 0 0 chr10 52603781 52603818 -87712947 + AT_rich Low_complexity Low_complexity 1 37 0 2370 88 3 0 chr10 52604080 52604387 -87712378 - AluSp SINE Alu -5 308 1 465 19 0 0 chr10 52605174 52605228 -87711537 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 201 189 44 11 chr10 52605974 52606064 -87710701 + (TA)n Simple_repeat Simple_repeat 1 93 0 47 33 0 0 chr10 52606064 52606125 -87710640 + AT_rich Low_complexity Low_complexity 1 61 0 243 216 0 0 chr10 52606125 52606241 -87710524 + (TA)n Simple_repeat Simple_repeat 2 117 0 62 14 0 0 chr10 52606246 52606315 -87710450 + AT_rich Low_complexity Low_complexity 1 69 0 259 292 39 77 chr10 52607455 52607585 -87709180 - MIR3 SINE MIR -2 206 82 254 140 0 20 chr10 52608014 52608064 -87708701 + (TTC)n Simple_repeat Simple_repeat 3 51 0 1999 137 3 0 chr10 52608066 52608359 -87708406 - AluSx SINE Alu -18 294 1 237 208 26 52 chr10 52609545 52609622 -87707143 + MIR3 SINE MIR 128 202 -6 1204 192 174 21 chr10 52610481 52610809 -87705956 - L1MC3 LINE L1 -172 7613 7236 231 36 0 0 chr10 52611425 52611453 -87705312 + (T)n Simple_repeat Simple_repeat 1 28 0 207 0 0 0 chr10 52611465 52611488 -87705277 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr10 52611617 52611641 -87705124 + AT_rich Low_complexity Low_complexity 1 24 0 43725 39 3 1 chr10 52611641 52617786 -87698979 - L1PA2 LINE L1 0 6155 1 598 243 61 99 chr10 52617976 52618239 -87698526 - MIR SINE MIR 0 262 10 2216 129 0 0 chr10 52618284 52618595 -87698170 + AluSq SINE Alu 1 311 -2 249 57 0 0 chr10 52619245 52619280 -87697485 + (TG)n Simple_repeat Simple_repeat 2 36 0 2081 123 0 19 chr10 52619549 52619859 -87696906 - AluSq SINE Alu -9 304 1 1022 193 0 5 chr10 52619882 52620069 -87696696 - AluJo SINE Alu -5 307 122 222 250 0 0 chr10 52620235 52620287 -87696478 + L2 LINE L2 3220 3271 -1 1771 164 7 3 chr10 52621400 52621687 -87695078 - AluSx SINE Alu -24 288 1 18691 96 6 6 chr10 52621829 52624546 -87692219 - L1P LINE L1 -1146 5000 2282 2187 97 3 7 chr10 52626370 52626670 -87690095 - AluSx SINE Alu -13 299 1 191 247 143 97 chr10 52627135 52627289 -87689476 + L3 LINE CR1 1091 1251 -326 703 170 48 136 chr10 52627689 52627895 -87688870 - MER5A DNA MER1_type -1 188 1 334 278 146 13 chr10 52627917 52628068 -87688697 - MIR SINE MIR -75 187 17 180 0 0 0 chr10 52628344 52628364 -87688401 + (TTG)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr10 52628917 52628940 -87687825 + AT_rich Low_complexity Low_complexity 1 23 0 638 287 43 6 chr10 52629084 52629248 -87687517 - MER5B DNA MER1_type -1 177 8 2410 94 0 0 chr10 52629864 52630171 -87686594 + AluSq SINE Alu 1 307 -6 279 315 1 0 chr10 52630398 52630477 -87686288 + MIR SINE MIR 73 151 -60 831 305 23 27 chr10 52630627 52630886 -87685879 + MIR SINE MIR 4 261 -1 1615 177 22 42 chr10 52631942 52632253 -87684512 - AluJo SINE Alu -7 305 1 28 48 0 0 chr10 52632890 52632932 -87683833 + AT_rich Low_complexity Low_complexity 1 42 0 2053 112 4 0 chr10 52633054 52633371 -87683394 - AluSc SINE Alu 0 320 3 1700 159 6 40 chr10 52633487 52633808 -87682957 + AluJb SINE Alu 1 310 -2 35 41 0 0 chr10 52634162 52634211 -87682554 + AT_rich Low_complexity Low_complexity 1 49 0 480 248 24 8 chr10 52634286 52634411 -87682354 - MER94 DNA DNA -2 132 6 1166 216 83 70 chr10 52634421 52634879 -87681886 - MLT1C LTR MaLR -2 465 2 710 278 0 6 chr10 52634954 52635123 -87681642 + MER8 DNA MER2_type 10 177 -62 321 115 13 141 chr10 52635161 52635239 -87681526 - Tigger2 DNA MER2_type -2650 68 1 21 0 0 0 chr10 52635327 52635348 -87681417 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 52635400 52635423 -87681342 + AT_rich Low_complexity Low_complexity 1 23 0 217 337 56 0 chr10 52635559 52635648 -87681117 - MIR SINE MIR -113 149 56 199 219 52 0 chr10 52635980 52636076 -87680689 + (TA)n Simple_repeat Simple_repeat 2 102 0 6726 178 15 4 chr10 52636233 52636586 -87680179 - L1PB1 LINE L1 -4 6863 6515 420 71 0 0 chr10 52636586 52636642 -87680123 + (CA)n Simple_repeat Simple_repeat 2 57 0 6726 178 15 4 chr10 52636642 52638010 -87678755 - L1PB1 LINE L1 -352 6515 5106 393 22 0 0 chr10 52638010 52638056 -87678709 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 6726 178 15 4 chr10 52638056 52638615 -87678150 - L1PB1 LINE L1 -1761 5106 4555 3146 120 71 4 chr10 52638634 52639186 -87677579 - L1PB1 LINE L1 -3924 2939 2351 2120 216 91 13 chr10 52639177 52640578 -87676187 - L1PB1 LINE L1 -5073 1790 136 * 294 319 28 7 chr10 52640609 52640750 -87676015 - L1MC/D LINE L1 -2087 5721 5578 430 317 96 34 chr10 52640764 52641086 -87675679 - L3 LINE CR1 -147 1430 1089 609 228 38 11 chr10 52641919 52642103 -87674662 + L1MB8 LINE L1 5664 5852 -326 1564 240 44 32 chr10 52643126 52643622 -87673143 - L1ME1 LINE L1 -5 6161 5660 270 345 23 14 chr10 52643843 52643953 -87672812 + MIR SINE MIR 57 167 -41 2950 134 46 4 chr10 52644086 52644547 -87672218 - LOR1a LTR ERV1 0 497 18 602 103 46 0 chr10 52644562 52644649 -87672116 - LOR1a-int LTR ERV1 0 8120 8030 * 1757 122 8 4 chr10 52644648 52644911 -87671854 - LOR1a-int LTR ERV1 -2056 6064 5801 * 30174 114 49 32 chr10 52644901 52644957 -87671808 - LOR1a-int LTR ERV1 -2596 5524 5470 198 0 0 0 chr10 52644957 52644979 -87671786 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 30174 114 49 32 chr10 52644979 52645459 -87671306 - LOR1a-int LTR ERV1 -2650 5470 4999 4926 155 49 46 chr10 52645459 52646527 -87670238 - MER11C LTR ERVK 0 1071 1 30174 114 49 32 chr10 52646527 52649605 -87667160 - LOR1a-int LTR ERV1 -3121 4999 1973 2115 114 7 0 chr10 52649605 52649895 -87666870 - AluY SINE Alu -3 308 17 30174 114 49 32 chr10 52649895 52650338 -87666427 - LOR1a-int LTR ERV1 -6147 1973 1539 2429 89 0 0 chr10 52650338 52650641 -87666124 + AluY SINE Alu 1 303 -8 30174 114 49 32 chr10 52650641 52651816 -87664949 - LOR1a-int LTR ERV1 -6581 1539 203 1777 192 26 56 chr10 52651784 52652212 -87664553 - LOR1a-int LTR ERV1 -7704 416 2 * 3272 139 2 0 chr10 52652213 52652709 -87664056 - LOR1a LTR ERV1 0 497 1 546 274 29 0 chr10 52652709 52652884 -87663881 + MER46C DNA MER2_type 127 306 -32 2309 127 5 3 chr10 52652951 52653320 -87663445 - L1PB1 LINE L1 0 6151 5782 3637 155 8 1 chr10 52653366 52654382 -87662383 - L1PB1 LINE L1 -359 5792 4767 912 281 48 32 chr10 52654382 52654695 -87662070 - MLT1J LTR MaLR -17 494 177 2982 100 2 33 chr10 52654842 52655293 -87661472 - L1PA8 LINE L1 -33 6139 5703 2045 158 7 38 chr10 52655286 52655704 -87661061 + L1MA4A LINE L1 5700 6104 -199 * 739 215 81 16 chr10 52657660 52657846 -87658919 + MER3 DNA MER1_type 1 198 -11 2395 203 8 19 chr10 52658042 52658378 -87658387 - L1PB1 LINE L1 -1403 4743 4413 2093 109 25 0 chr10 52658378 52658684 -87658081 - AluSx SINE Alu 0 313 1 2395 203 8 19 chr10 52658684 52658932 -87657833 - L1PB1 LINE L1 -1733 4413 4164 270 330 80 0 chr10 52661171 52661283 -87655482 - MIR SINE MIR -114 148 28 31 58 0 0 chr10 52662704 52662756 -87654009 + AT_rich Low_complexity Low_complexity 1 52 0 407 261 137 31 chr10 52663365 52663526 -87653239 - MER5A DNA MER1_type -5 184 7 204 294 101 46 chr10 52663534 52663643 -87653122 + L3b LINE CR1 1336 1450 -133 2298 98 3 0 chr10 52663696 52663992 -87652773 + AluSq SINE Alu 3 299 -14 236 370 49 25 chr10 52664680 52664842 -87651923 + L2 LINE L2 1111 1276 -2038 1716 146 47 58 chr10 52664842 52665184 -87651581 - MER44D DNA MER2_type -1 608 1 3178 100 7 0 chr10 52665184 52665623 -87651142 + MER41A LTR ERV1 3 444 -110 1456 142 12 24 chr10 52665643 52665890 -87650875 - AluSx SINE Alu -63 249 6 578 113 52 41 chr10 52666051 52666148 -87650617 + MER41B LTR ERV1 530 627 -8 237 329 146 36 chr10 52666166 52666467 -87650298 + L2 LINE L2 1294 1627 -1687 * 271 356 67 0 chr10 52666464 52666568 -87650197 - L2 LINE L2 -16 3297 3187 1286 326 95 68 chr10 52666595 52666677 -87650088 + L2 LINE L2 1612 1690 -1623 1773 168 7 7 chr10 52666677 52666980 -87649785 + AluJb SINE Alu 3 305 -7 1286 326 95 68 chr10 52666980 52667068 -87649697 + L2 LINE L2 1690 1774 -1539 2066 134 0 0 chr10 52667068 52667359 -87649406 + AluSx SINE Alu 1 291 -21 1286 326 95 68 chr10 52667359 52668825 -87647940 + L2 LINE L2 1774 3281 -32 320 214 25 31 chr10 52669338 52669497 -87647268 + (TA)n Simple_repeat Simple_repeat 1 158 0 347 258 106 0 chr10 52670048 52670180 -87646585 - L1ME4a LINE L1 -268 5853 5708 713 325 35 12 chr10 52670410 52670665 -87646100 + MIR SINE MIR 2 262 0 226 49 24 24 chr10 52671180 52671221 -87645544 + (CA)n Simple_repeat Simple_repeat 2 42 0 191 300 85 31 chr10 52671415 52671545 -87645220 + MIR SINE MIR 88 224 -38 2193 108 51 8 chr10 52672295 52672639 -87644126 - L1PB1 LINE L1 -3 6148 5787 276 30 0 0 chr10 52672639 52672672 -87644093 + (TG)n Simple_repeat Simple_repeat 2 34 0 678 148 0 0 chr10 52672681 52672843 -87643922 + (TA)n Simple_repeat Simple_repeat 1 162 0 3723 155 10 13 chr10 52672847 52673900 -87642865 - L1PB1 LINE L1 -360 5791 4741 1255 124 0 6 chr10 52673936 52674113 -87642652 + AluSc SINE Alu 1 176 -133 5059 214 10 19 chr10 52674130 52675336 -87641429 + L1 LINE L1 2849 4043 -2103 455 291 117 10 chr10 52676071 52676277 -87640488 + MIR SINE MIR 32 259 -3 722 275 37 5 chr10 52676780 52676969 -87639796 + MIR SINE MIR 68 262 0 329 311 113 18 chr10 52677342 52677373 -87639392 - MLT1K LTR MaLR 0 588 561 207 0 0 0 chr10 52677373 52677396 -87639369 + (CA)n Simple_repeat Simple_repeat 1 23 0 329 311 113 18 chr10 52677396 52677586 -87639179 - MLT1K LTR MaLR -27 561 346 659 255 30 6 chr10 52677693 52677952 -87638813 + L1M4 LINE L1 3134 3400 -2746 7589 109 63 14 chr10 52679085 52680989 -87635776 - L1PA10 LINE L1 0 6168 4171 403 296 194 21 chr10 52681070 52681492 -87635273 - L1MC4a LINE L1 -1883 5925 5431 358 357 70 8 chr10 52681501 52681759 -87635006 - L1MC4a LINE L1 -861 5285 5012 255 345 61 20 chr10 52684559 52684756 -87632009 - MLT1K LTR MaLR -220 368 164 249 388 35 0 chr10 52686637 52686753 -87630012 + MIR SINE MIR 48 167 -95 650 169 59 0 chr10 52686775 52686911 -87629854 + L1MA4A LINE L1 6148 6291 -12 209 346 83 49 chr10 52687114 52687380 -87629385 - L2 LINE L2 -190 3082 2808 1976 294 130 38 chr10 52688548 52688994 -87627771 - L2 LINE L2 -1653 1661 1258 2402 60 0 0 chr10 52688994 52689294 -87627471 - AluY SINE Alu -2 309 10 1976 294 130 38 chr10 52689294 52689716 -87627049 - L2 LINE L2 -2056 1258 876 1509 214 76 0 chr10 52689716 52690033 -87626732 - MER2 DNA MER2_type -2 342 2 1976 294 130 38 chr10 52690033 52690048 -87626717 - L2 LINE L2 -2438 876 864 2119 196 46 0 chr10 52690048 52690461 -87626304 - MSTB1 LTR MaLR 0 432 1 1976 294 130 38 chr10 52690461 52690557 -87626208 - L2 LINE L2 -2450 864 589 2506 166 43 10 chr10 52690952 52691435 -87625330 - L1MC1 LINE L1 -27 6306 5808 607 326 45 5 chr10 52692089 52692313 -87624452 + MIR SINE MIR 4 236 -26 1217 187 45 119 chr10 52692545 52692947 -87623818 + MLT1A2 LTR MaLR 3 374 0 281 292 193 12 chr10 52693393 52693564 -87623201 + MIR3 SINE MIR 3 204 -4 25 31 0 0 chr10 52694083 52694115 -87622650 + AT_rich Low_complexity Low_complexity 1 32 0 5007 140 16 31 chr10 52694269 52695303 -87621462 - L1PB4 LINE L1 0 6156 5138 1194 268 46 26 chr10 52695277 52695781 -87620984 - HAL1b LINE L1 -672 676 163 * 810 347 30 40 chr10 52695980 52696378 -87620387 + L2 LINE L2 48 441 -2873 409 288 84 16 chr10 52696904 52697095 -87619670 - Charlie8 DNA MER1_type -2173 244 41 274 319 43 0 chr10 52697251 52697345 -87619420 + L2 LINE L2 2281 2378 -936 343 311 98 77 chr10 52697554 52697892 -87618873 + L1MEd LINE L1 400 744 -5375 324 297 36 24 chr10 52698035 52698200 -87618565 + L1MEd LINE L1 977 1143 -4976 248 334 80 24 chr10 52698240 52698617 -87618148 + L1MEd LINE L1 2299 2696 -3433 344 236 96 55 chr10 52698649 52698848 -87617917 + L1MC4 LINE L1 5192 5398 -748 203 133 0 0 chr10 52698853 52698883 -87617882 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 912 189 13 0 chr10 52698883 52699042 -87617723 - FRAM SINE Alu -18 158 1 829 337 67 9 chr10 52699042 52699508 -87617257 + L1MC4 LINE L1 5390 5821 -349 183 184 0 0 chr10 52699760 52699798 -87616967 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 52699830 52699851 -87616914 + AT_rich Low_complexity Low_complexity 1 21 0 5644 105 3 10 chr10 52701003 52701694 -87615071 - L1PA13 LINE L1 0 6163 5448 2248 112 0 0 chr10 52701694 52701997 -87614768 - AluSx SINE Alu -9 303 1 5644 105 3 10 chr10 52701997 52702339 -87614426 - L1PA13 LINE L1 -715 5448 5105 255 297 36 54 chr10 52702376 52702487 -87614278 - MER5A DNA MER1_type 0 189 81 342 389 23 8 chr10 52702651 52702782 -87613983 + MIR SINE MIR 14 146 -116 198 308 128 34 chr10 52702800 52702917 -87613848 - L2 LINE L2 0 3313 3186 550 251 36 136 chr10 52702972 52703251 -87613514 - MIR SINE MIR 0 262 12 21 0 0 0 chr10 52703327 52703348 -87613417 + AT_rich Low_complexity Low_complexity 1 21 0 310 250 129 30 chr10 52703526 52703658 -87613107 - MIR SINE MIR 0 262 118 195 322 268 0 chr10 52703841 52704046 -87612719 + L2 LINE L2 3011 3270 -43 180 206 143 0 chr10 52704936 52704999 -87611766 + L2 LINE L2 1687 1758 -1556 764 254 20 10 chr10 52705721 52705922 -87610843 - L1ME1 LINE L1 0 6166 5964 225 94 0 0 chr10 52706292 52706324 -87610441 + (T)n Simple_repeat Simple_repeat 1 32 0 21 82 0 0 chr10 52707873 52707922 -87608843 + AT_rich Low_complexity Low_complexity 1 49 0 2330 192 20 20 chr10 52708263 52708764 -87608001 - MER63 DNA MER1_type -130 931 431 1402 168 16 56 chr10 52708766 52709070 -87607695 - AluJo SINE Alu -13 299 8 478 229 44 4 chr10 52709114 52709283 -87607482 - MER63 DNA MER1_type -767 294 34 335 23 23 0 chr10 52709283 52709327 -87607438 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 478 229 44 4 chr10 52709327 52709363 -87607402 - MER63 DNA MER1_type -1027 34 1 268 306 0 0 chr10 52712891 52712953 -87603812 + polypyrimidine Low_complexity Low_complexity 1 62 0 247 184 0 20 chr10 52713813 52713862 -87602903 + MLT1K LTR MaLR 540 587 -1 559 242 137 0 chr10 52714433 52714586 -87602179 + MIR SINE MIR 79 252 -10 22 0 0 0 chr10 52714757 52714779 -87601986 + AT_rich Low_complexity Low_complexity 1 22 0 228 287 30 20 chr10 52715134 52715235 -87601530 + MLT1K LTR MaLR 405 506 -82 1823 127 8 4 chr10 52715540 52715807 -87600958 + AluSq SINE Alu 1 268 -45 21 0 0 0 chr10 52718505 52718526 -87598239 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 52719646 52719673 -87597092 + AT_rich Low_complexity Low_complexity 1 27 0 413 233 150 23 chr10 52720607 52720740 -87596025 - MIR SINE MIR 0 262 113 273 276 47 55 chr10 52721050 52721177 -87595588 - MIR SINE MIR -98 164 39 2151 100 3 0 chr10 52722454 52722744 -87594021 + AluSc SINE Alu 1 291 -18 13644 142 14 19 chr10 52722761 52723289 -87593476 + Tigger1 DNA MER2_type 1 530 -1888 2477 132 0 3 chr10 52723289 52723654 -87593111 - THE1B LTR MaLR 0 364 1 11312 102 7 2 chr10 52723654 52725226 -87591539 - THE1B-int LTR MaLR 0 1580 2 2221 158 28 3 chr10 52725227 52725582 -87591183 - THE1B LTR MaLR 0 364 1 13644 142 14 19 chr10 52725582 52727325 -87589440 + Tigger1 DNA MER2_type 528 2265 -153 21933 156 24 26 chr10 52727403 52733899 -87582866 - L1MA3 LINE L1 -215 7509 1044 3162 167 31 28 chr10 52733899 52734509 -87582256 + LTR9 LTR ERV1 1 612 0 21933 156 24 26 chr10 52734509 52735541 -87581224 - L1MA3 LINE L1 -6680 1044 11 688 183 0 0 chr10 52735542 52735657 -87581108 + Tigger1 DNA MER2_type 2304 2418 0 436 304 25 25 chr10 52735990 52736151 -87580614 + MLT1K LTR MaLR 16 176 -412 330 26 0 0 chr10 52737966 52738005 -87578760 + (TG)n Simple_repeat Simple_repeat 1 39 0 381 58 0 0 chr10 52738007 52738059 -87578706 + (GA)n Simple_repeat Simple_repeat 1 52 0 206 349 19 28 chr10 52738812 52738918 -87577847 + MIR SINE MIR 3 107 -155 285 303 48 44 chr10 52739209 52739319 -87577446 + L1ME LINE L1 5616 5724 -397 2280 100 0 3 chr10 52739319 52739630 -87577135 + AluY SINE Alu 1 310 -1 285 303 48 44 chr10 52739630 52739747 -87577018 + L1ME LINE L1 5724 5844 -277 295 252 32 49 chr10 52740170 52740293 -87576472 + MLT1K LTR MaLR 468 588 0 23 0 0 0 chr10 52740423 52740446 -87576319 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 52740491 52740513 -87576252 + AT_rich Low_complexity Low_complexity 1 22 0 462 273 45 34 chr10 52743380 52743556 -87573209 - L1ME LINE L1 -361 5760 5583 2527 62 0 3 chr10 52743590 52743899 -87572866 - AluY SINE Alu -2 309 2 28 61 0 0 chr10 52743983 52744032 -87572733 + AT_rich Low_complexity Low_complexity 1 49 0 335 294 73 48 chr10 52744236 52744525 -87572240 - L1ME LINE L1 -860 5286 4991 29 47 0 0 chr10 52744543 52744586 -87572179 + AT_rich Low_complexity Low_complexity 1 43 0 2546 36 7 0 chr10 52744668 52744971 -87571794 + AluY SINE Alu 1 305 -6 367 343 135 15 chr10 52745057 52745515 -87571250 + HAL1 LINE L1 1410 1922 -585 320 300 100 27 chr10 52745923 52746073 -87570692 + HAL1b LINE L1 751 911 -437 289 260 27 14 chr10 52746600 52746673 -87570092 + MLT1J LTR MaLR 72 145 -366 595 281 16 21 chr10 52746682 52746874 -87569891 + MLT1J LTR MaLR 72 262 -249 877 246 32 0 chr10 52747290 52747510 -87569255 + L1MB7 LINE L1 4679 4905 -1241 * 9355 31 0 6 chr10 52747505 52748638 -87568127 - L1PA5 LINE L1 -1098 5048 3923 7186 45 5 2 chr10 52748638 52749732 -87567033 + L1PA5 LINE L1 5052 6147 -7 272 191 0 0 chr10 52749747 52749794 -87566971 + L1MB7 LINE L1 4889 4935 -1211 320 0 0 0 chr10 52749800 52749844 -87566921 - AluY SINE Alu 0 300 257 3910 206 58 8 chr10 52749845 52750327 -87566438 + L1MB7 LINE L1 4922 5378 -806 1862 80 16 0 chr10 52750327 52750571 -87566194 + L1PA7 LINE L1 5896 6150 -4 3910 206 58 8 chr10 52750571 52751255 -87565510 + L1MB7 LINE L1 5378 6156 -28 252 216 0 0 chr10 52752028 52752079 -87564686 + MER4B-int LTR ERV1 1146 1196 -5562 29 70 0 0 chr10 52753086 52753143 -87563622 + AT_rich Low_complexity Low_complexity 1 57 0 50 59 0 0 chr10 52753370 52753455 -87563310 + AT_rich Low_complexity Low_complexity 1 85 0 664 260 176 12 chr10 52753559 52753975 -87562790 + L1MC/D LINE L1 5288 5771 -2037 23 54 0 0 chr10 52754447 52754484 -87562281 + AT_rich Low_complexity Low_complexity 1 37 0 397 278 81 21 chr10 52755268 52755483 -87561282 + L1P4 LINE L1 5610 5833 -302 268 292 0 0 chr10 52755655 52755727 -87561038 - MLT1L LTR MaLR 0 615 544 427 292 9 0 chr10 52755895 52756008 -87560757 + MER94 DNA DNA 1 114 -20 259 259 0 0 chr10 52756257 52756311 -87560454 + Charlie1 DNA MER1_type 1 54 -2707 871 215 14 42 chr10 52756351 52756565 -87560200 + AluJo SINE Alu 2 209 -103 601 194 23 0 chr10 52756633 52756762 -87560003 + Charlie1 DNA MER1_type 2620 2751 -10 21 71 0 0 chr10 52757006 52757048 -87559717 + AT_rich Low_complexity Low_complexity 1 42 0 230 316 35 9 chr10 52757248 52757362 -87559403 - L1M4 LINE L1 -2314 3832 3716 887 250 42 19 chr10 52757521 52757733 -87559032 - MIR SINE MIR -25 237 21 1543 309 111 22 chr10 52757951 52758856 -87557909 - L2 LINE L2 0 3313 2327 1544 230 60 50 chr10 52758856 52759356 -87557409 - MLT1D LTR MaLR 0 505 1 1543 309 111 22 chr10 52759356 52759380 -87557385 - L2 LINE L2 -986 2327 2307 26 30 0 0 chr10 52759524 52759557 -87557208 + AT_rich Low_complexity Low_complexity 1 33 0 509 259 163 21 chr10 52759893 52760225 -87556540 - L1ME4a LINE L1 -157 5964 5586 522 315 68 9 chr10 52760567 52760786 -87555979 - MIR SINE MIR -13 249 18 189 0 0 0 chr10 52760849 52760870 -87555895 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 363 306 36 0 chr10 52760881 52760992 -87555773 - L2 LINE L2 -21 3292 3178 368 256 60 51 chr10 52761153 52761270 -87555495 + L2 LINE L2 3184 3301 -12 333 228 62 107 chr10 52762782 52763006 -87553759 - LTR41 LTR ERVL -125 648 435 343 258 159 40 chr10 52763138 52763289 -87553476 - LTR41 LTR ERVL -595 178 10 702 278 66 29 chr10 52763715 52763956 -87552809 + MIR SINE MIR 13 262 0 224 312 242 11 chr10 52765455 52765641 -87551124 - MIR SINE MIR -6 256 28 341 296 59 24 chr10 52765675 52765844 -87550921 + MIR SINE MIR 58 232 -30 1541 86 10 0 chr10 52766010 52766251 -87550514 - AluSg/x SINE Alu 0 324 82 21 0 0 0 chr10 52768528 52768549 -87548216 + AT_rich Low_complexity Low_complexity 1 21 0 192 273 61 30 chr10 52769313 52769379 -87547386 + MIR3 SINE MIR 138 205 -3 364 348 82 30 chr10 52769474 52769744 -87547021 + L2 LINE L2 2227 2510 -804 829 188 40 17 chr10 52769997 52770173 -87546592 - MLT1A2 LTR MaLR 0 374 195 1005 155 141 69 chr10 52770205 52770496 -87546269 + MER33 DNA MER1_type 4 315 -9 1968 154 52 3 chr10 52771434 52771778 -87544987 + MLT1A1 LTR MaLR 1 361 -4 938 277 67 39 chr10 52772225 52772859 -87543906 - L1MC4 LINE L1 0 8042 7270 2066 142 15 45 chr10 52773360 52773761 -87543004 - MLT1B LTR MaLR -1 389 1 687 276 140 47 chr10 52773889 52774433 -87542332 + L2 LINE L2 2713 3313 0 271 324 106 17 chr10 52774499 52774678 -87542087 + MIR SINE MIR 2 196 -66 263 270 102 29 chr10 52775081 52775218 -87541547 - MIR3 SINE MIR -15 193 47 424 281 94 62 chr10 52776719 52776796 -87539969 + MIR SINE MIR 56 129 -133 1936 141 3 24 chr10 52776796 52777094 -87539671 + AluJb SINE Alu 1 292 -20 424 281 94 62 chr10 52777094 52777176 -87539589 + MIR SINE MIR 129 220 -42 27 0 0 0 chr10 52777224 52777251 -87539514 + AT_rich Low_complexity Low_complexity 1 27 0 2429 70 3 0 chr10 52777655 52777971 -87538794 - L1PA6 LINE L1 -9 6145 5829 22 56 0 0 chr10 52779018 52779054 -87537711 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 52779481 52779502 -87537263 + AT_rich Low_complexity Low_complexity 1 21 0 2445 132 81 5 chr10 52779518 52779950 -87536815 - L1PA14 LINE L1 -3 6158 5694 2239 127 0 3 chr10 52780942 52781256 -87535509 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 52782762 52782786 -87533979 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr10 52783711 52783736 -87533029 + AT_rich Low_complexity Low_complexity 1 25 0 30 59 0 0 chr10 52784261 52784312 -87532453 + AT_rich Low_complexity Low_complexity 1 51 0 6181 130 50 9 chr10 52784395 52785402 -87531363 + HSMAR2 DNA Mariner 2 1049 -253 704 136 15 8 chr10 52785402 52785534 -87531231 + HSMAR2 DNA Mariner 1164 1296 -6 2194 94 0 27 chr10 52785854 52786152 -87530613 - AluSg SINE Alu -20 290 1 428 203 8 59 chr10 52786152 52786211 -87530554 + MIR SINE MIR 122 174 -88 5122 95 6 0 chr10 52786211 52786898 -87529867 - LTR8 LTR ERV1 0 691 1 428 203 8 59 chr10 52786898 52786956 -87529809 + MIR SINE MIR 174 233 -29 1547 182 71 0 chr10 52787264 52787533 -87529232 - AluJo SINE Alu -22 290 3 687 170 0 67 chr10 52788076 52788211 -87528554 - LTR8 LTR ERV1 -565 126 1 410 158 110 24 chr10 52788211 52788289 -87528476 - THE1C LTR MaLR -290 85 1 450 280 109 21 chr10 52788332 52788525 -87528240 - MIR SINE MIR -4 258 49 962 192 0 6 chr10 52788526 52788698 -87528067 - AluSg SINE Alu -8 302 132 6832 61 25 4 chr10 52788698 52789683 -87527082 - L1PA7 LINE L1 -1 6153 5156 2606 99 5 0 chr10 52789683 52790057 -87526708 + L1P LINE L1 4741 5116 -1030 1117 75 0 0 chr10 52790057 52790191 -87526574 - AluSg SINE Alu -176 134 1 3007 167 35 71 chr10 52790665 52791382 -87525383 + LTR8 LTR ERV1 1 691 0 1254 211 119 62 chr10 52791746 52792182 -87524583 + LTR37B LTR ERV1 8 468 0 456 298 71 75 chr10 52793053 52793335 -87523430 + MLT1K LTR MaLR 134 414 -174 330 320 23 8 chr10 52793506 52793634 -87523131 - MIR SINE MIR -132 130 1 2863 7 0 0 chr10 52793710 52794019 -87522746 + AluY SINE Alu 1 309 -2 30 59 0 0 chr10 52794243 52794294 -87522471 + AT_rich Low_complexity Low_complexity 1 51 0 6181 130 50 9 chr10 52794377 52795384 -87521381 + HSMAR2 DNA Mariner 2 1049 -253 704 136 15 8 chr10 52795384 52795516 -87521249 + HSMAR2 DNA Mariner 1164 1296 -6 2215 107 3 0 chr10 52795836 52796127 -87520638 - AluSg SINE Alu -18 292 1 1197 184 12 119 chr10 52796671 52796991 -87519774 + AluJo SINE Alu 1 286 -16 24 0 0 0 chr10 52796994 52797018 -87519747 + AT_rich Low_complexity Low_complexity 1 24 0 640 272 83 31 chr10 52797214 52797442 -87519323 - MIR SINE MIR -17 245 6 2279 92 3 0 chr10 52798531 52798834 -87517931 + AluSq SINE Alu 1 304 -9 7043 180 107 90 chr10 52798957 52799758 -87517007 + Charlie5 DNA MER1_type 20 805 -1819 846 192 0 24 chr10 52799758 52799925 -87516840 + FRAM SINE Alu 1 163 -13 7043 180 107 90 chr10 52799925 52800528 -87516237 + Charlie5 DNA MER1_type 805 1396 -1228 1879 160 3 14 chr10 52800528 52800821 -87515944 + AluJo SINE Alu 3 292 -20 7043 180 107 90 chr10 52800821 52801805 -87514960 + Charlie5 DNA MER1_type 1396 2620 -4 2214 89 0 36 chr10 52804449 52804751 -87512014 + AluSg SINE Alu 3 293 -17 2168 117 0 7 chr10 52806561 52806891 -87509874 + AluSq SINE Alu 6 333 0 421 373 73 5 chr10 52807654 52807874 -87508891 - MIR SINE MIR -8 254 20 274 202 70 105 chr10 52808805 52808919 -87507846 + L2 LINE L2 3147 3256 -16 635 194 206 0 chr10 52809042 52809212 -87507553 - MER3 DNA MER1_type -3 206 2 28 102 0 0 chr10 52809562 52809660 -87507105 + AT_rich Low_complexity Low_complexity 1 98 0 245 303 78 49 chr10 52809723 52810030 -87506735 - L1ME LINE L1 -240 5881 5566 509 282 32 0 chr10 52810961 52811085 -87505680 + MIR SINE MIR 13 140 -122 682 161 0 0 chr10 52811092 52811204 -87505561 - L1MA8 LINE L1 -397 5894 5783 204 313 45 0 chr10 52811211 52811278 -87505487 + MIR SINE MIR 156 225 -37 3739 191 20 59 chr10 52811362 52811901 -87504864 - L1MA9 LINE L1 -38 6274 5715 291 28 0 0 chr10 52811901 52811937 -87504828 + (CA)n Simple_repeat Simple_repeat 2 37 0 3739 191 20 59 chr10 52811937 52812119 -87504646 - L1MA9 LINE L1 -597 5715 5527 2099 135 0 13 chr10 52812119 52812422 -87504343 - AluSx SINE Alu -12 300 2 3739 191 20 59 chr10 52812422 52812458 -87504307 - L1MA9 LINE L1 -785 5527 5491 1974 134 52 0 chr10 52812458 52812749 -87504016 - AluSx SINE Alu -6 306 1 3739 191 20 59 chr10 52812749 52813777 -87502988 - L1MA9 LINE L1 -821 5491 4550 1996 110 0 10 chr10 52814085 52814384 -87502381 + AluY SINE Alu 16 311 0 400 233 122 14 chr10 52814401 52814540 -87502225 - MIR SINE MIR -70 192 40 207 319 106 35 chr10 52814760 52814873 -87501892 - MIR SINE MIR -108 154 34 186 170 19 57 chr10 52816702 52816755 -87500010 - L2 LINE L2 -1524 1790 1740 827 275 30 21 chr10 52817044 52817277 -87499488 + MIR SINE MIR 3 237 -25 21 0 0 0 chr10 52817795 52817816 -87498949 + AT_rich Low_complexity Low_complexity 1 21 0 2139 104 0 3 chr10 52818055 52818342 -87498423 - AluSq SINE Alu -13 300 15 1421 261 52 37 chr10 52818713 52819172 -87497593 - MLT1C LTR MaLR -1 466 1 256 322 74 7 chr10 52819214 52819363 -87497402 - L2 LINE L2 -469 2845 2687 1865 255 44 4 chr10 52819724 52820175 -87496590 - MLT1H1 LTR MaLR -1 554 86 293 187 8 0 chr10 52820189 52820256 -87496509 + MLT1F1 LTR MaLR 28 138 -457 234 238 63 0 chr10 52821556 52821619 -87495146 + L1MA2 LINE L1 6187 6253 -51 2053 109 3 14 chr10 52821690 52822014 -87494751 + AluSg SINE Alu 1 321 0 408 71 0 0 chr10 52822139 52822195 -87494570 + (TA)n Simple_repeat Simple_repeat 2 57 0 1700 176 40 27 chr10 52822982 52823352 -87493413 + THE1C LTR MaLR 1 375 0 1620 183 127 71 chr10 52824400 52824809 -87491956 + MSTB LTR MaLR 1 432 0 2188 110 7 0 chr10 52825213 52825512 -87491253 + AluSx SINE Alu 1 301 -11 1670 148 118 53 chr10 52826988 52827386 -87489379 + MSTA LTR MaLR 1 424 -4 872 291 29 12 chr10 52827392 52827636 -87489129 - MIR SINE MIR -11 251 4 21 0 0 0 chr10 52827798 52827819 -87488946 + AT_rich Low_complexity Low_complexity 1 21 0 1935 144 166 0 chr10 52828184 52828551 -87488214 + MSTA LTR MaLR 1 428 0 716 328 64 41 chr10 52828554 52829184 -87487581 - L2 LINE L2 0 3313 2667 332 208 30 127 chr10 52829193 52829333 -87487432 - MLT1J LTR MaLR -1 614 383 280 339 23 52 chr10 52829590 52829764 -87487001 + MIR SINE MIR 92 260 -2 227 264 11 0 chr10 52829757 52829834 -87486931 + L2 LINE L2 3187 3265 -7 * 491 286 110 96 chr10 52830697 52831406 -87485359 - L2 LINE L2 -556 2758 2040 385 310 154 44 chr10 52831441 52831825 -87484940 - L2 LINE L2 -520 2794 2369 304 312 86 80 chr10 52831828 52832152 -87484613 - L2 LINE L2 -1250 2064 1739 203 247 26 13 chr10 52832188 52832265 -87484500 + (TA)n Simple_repeat Simple_repeat 2 79 0 22 0 0 0 chr10 52832370 52832392 -87484373 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 52832435 52832457 -87484308 + AT_rich Low_complexity Low_complexity 1 22 0 376 203 42 51 chr10 52832905 52833023 -87483742 - L2 LINE L2 0 3313 3197 413 266 31 31 chr10 52834411 52834539 -87482226 + MIR SINE MIR 13 140 -122 682 161 0 0 chr10 52834546 52834658 -87482107 - L1MA8 LINE L1 -397 5894 5783 204 313 45 0 chr10 52834665 52834732 -87482033 + MIR SINE MIR 156 225 -37 1851 203 22 98 chr10 52834816 52835359 -87481406 - L1MA9 LINE L1 -38 6274 5692 291 28 0 0 chr10 52835359 52835395 -87481370 + (CA)n Simple_repeat Simple_repeat 2 37 0 1851 203 22 98 chr10 52835395 52835578 -87481187 - L1MA9 LINE L1 -620 5692 5497 2029 134 0 20 chr10 52835578 52835883 -87480882 - AluSx SINE Alu -12 300 2 1851 203 22 98 chr10 52835883 52835919 -87480846 - L1MA9 LINE L1 -815 5497 5460 1974 134 52 0 chr10 52835919 52836210 -87480555 - AluSx SINE Alu -6 306 1 1851 203 22 98 chr10 52836210 52837188 -87479577 - L1MA9 LINE L1 -852 5460 4681 2163 132 0 0 chr10 52837562 52837866 -87478899 - AluSx SINE Alu -8 304 1 548 267 118 88 chr10 52837993 52838158 -87478607 + L1ME4a LINE L1 5644 5802 -319 1934 127 0 4 chr10 52838158 52838434 -87478331 + AluSx SINE Alu 1 275 -37 306 0 0 0 chr10 52838441 52838475 -87478290 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 548 267 118 88 chr10 52838475 52838724 -87478041 + L1ME4a LINE L1 5807 6079 -42 368 281 160 38 chr10 52838829 52839092 -87477673 - L2 LINE L2 -3 3310 3016 2356 280 95 22 chr10 52839572 52840540 -87476225 + L2 LINE L2 1249 2287 -1027 904 292 120 40 chr10 52840559 52841109 -87475656 + L2 LINE L2 2695 3290 -23 741 176 59 64 chr10 52841109 52841296 -87475469 + MER5A DNA MER1_type 4 189 0 904 292 120 40 chr10 52841296 52841322 -87475443 + L2 LINE L2 3290 3312 -1 5128 187 71 14 chr10 52841493 52842183 -87474582 - Charlie5 DNA MER1_type -308 2316 1666 1844 160 3 17 chr10 52842183 52842477 -87474288 - AluJo SINE Alu -20 292 3 5128 187 71 14 chr10 52842477 52843075 -87473690 - Charlie5 DNA MER1_type -958 1666 955 2138 120 0 13 chr10 52843080 52843381 -87473384 - AluSx SINE Alu -13 299 3 4059 151 57 37 chr10 52843459 52844328 -87472437 - MER4D LTR ERV1 0 866 1 324 339 50 63 chr10 52844484 52844723 -87472042 - L2 LINE L2 -12 3260 3025 2954 112 73 56 chr10 52844723 52845285 -87471480 - LTR10A LTR ERV1 -16 617 1 330 328 91 42 chr10 52845670 52845781 -87470984 + L1ME LINE L1 5315 5419 -702 2058 89 4 0 chr10 52845781 52846038 -87470727 - AluSp SINE Alu -55 258 1 330 328 91 42 chr10 52846038 52846234 -87470531 + L1ME LINE L1 5419 5637 -484 337 62 0 0 chr10 52846382 52846430 -87470335 + Alu SINE Alu 251 298 -2 348 24 0 0 chr10 52846535 52846576 -87470189 + (TC)n Simple_repeat Simple_repeat 1 41 0 1463 207 82 68 chr10 52847535 52848033 -87468732 - MLT1D LTR MaLR 0 505 1 249 353 12 0 chr10 52848171 52848240 -87468525 + MER115 DNA AcHobo 1 73 -620 2195 99 0 3 chr10 52848240 52848533 -87468232 + AluSc SINE Alu 1 292 -17 249 353 12 0 chr10 52848533 52848548 -87468217 + MER115 DNA AcHobo 73 86 -607 1031 203 19 10 chr10 52849314 52849521 -87467244 + MER2 DNA MER2_type 2 210 -135 228 162 81 0 chr10 52849829 52849903 -87466862 + (TA)n Simple_repeat Simple_repeat 1 80 0 698 165 16 71 chr10 52849951 52850133 -87466632 + L1MA9 LINE L1 6103 6274 -38 45 50 0 30 chr10 52852097 52852196 -87464569 + AT_rich Low_complexity Low_complexity 1 96 0 22 35 0 0 chr10 52854113 52854142 -87462623 + AT_rich Low_complexity Low_complexity 1 29 0 2501 56 0 10 chr10 52854497 52854803 -87461962 + AluY SINE Alu 1 303 -8 471 219 0 10 chr10 52854891 52854987 -87461778 - L2 LINE L2 0 3313 3219 219 319 32 11 chr10 52855306 52855400 -87461365 + MIR SINE MIR 97 192 -70 2119 131 0 0 chr10 52855444 52855741 -87461024 - AluSx SINE Alu -9 303 7 183 80 0 0 chr10 52856107 52856132 -87460633 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 1847 158 42 9 chr10 52856879 52857215 -87459550 - MER7A DNA MER2_type 0 346 2 420 294 86 30 chr10 52857236 52857479 -87459286 - MIR SINE MIR -7 255 4 297 352 102 11 chr10 52857786 52857962 -87458803 + L2 LINE L2 3116 3307 -6 775 272 132 12 chr10 52858749 52859060 -87457705 + L2 LINE L2 2526 2879 -435 1891 164 0 0 chr10 52859060 52859347 -87457418 - AluSq SINE Alu -6 307 21 775 272 132 12 chr10 52859347 52859362 -87457403 + L2 LINE L2 2879 2891 -423 601 317 63 78 chr10 52859359 52859706 -87457059 + L2 LINE L2 2830 3169 -144 * 210 71 0 0 chr10 52859706 52859734 -87457031 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 601 317 63 78 chr10 52859734 52859875 -87456890 + L2 LINE L2 3169 3311 -2 26 30 0 0 chr10 52859876 52859909 -87456856 + AT_rich Low_complexity Low_complexity 1 33 0 2043 132 3 3 chr10 52859909 52860197 -87456568 - AluSx SINE Alu -22 290 3 263 28 28 0 chr10 52860200 52860236 -87456529 + (TA)n Simple_repeat Simple_repeat 1 37 0 7213 213 72 30 chr10 52860440 52861091 -87455674 - L1MDa LINE L1 -3276 3264 2642 2164 120 0 7 chr10 52861091 52861391 -87455374 - AluSg SINE Alu -10 300 3 7213 213 72 30 chr10 52861391 52862411 -87454354 - L1MDa LINE L1 -3898 2642 1666 2224 111 0 0 chr10 52862411 52862708 -87454057 - AluY SINE Alu -14 297 1 7213 213 72 30 chr10 52862708 52864147 -87452618 - L1MDa LINE L1 -4874 1666 3 22 70 0 0 chr10 52864601 52864644 -87452121 + AT_rich Low_complexity Low_complexity 1 43 0 1346 86 0 0 chr10 52864972 52865147 -87451618 + AluY SINE Alu 133 307 -4 403 242 48 16 chr10 52865331 52865455 -87451310 + MIR SINE MIR 27 154 -108 2404 125 12 0 chr10 52866442 52866786 -87449979 + L1PA15 LINE L1 5813 6160 -5 6861 73 31 16 chr10 52867901 52869351 -87447414 + L1PA10 LINE L1 4684 6148 -20 2228 111 3 0 chr10 52869351 52869649 -87447116 - AluSp SINE Alu -14 299 1 6861 73 31 16 chr10 52869649 52869669 -87447096 + L1PA10 LINE L1 6148 6166 -2 687 272 105 64 chr10 52870130 52870690 -87446075 - MLT1H1 LTR MaLR 0 555 1 229 277 62 0 chr10 52870703 52870768 -87445997 - MIR3 SINE MIR -15 193 125 891 258 15 15 chr10 52870863 52871127 -87445638 - L1 LINE L1 -802 5344 5081 * 4762 148 26 37 chr10 52871124 52872021 -87444744 + L1MB1 LINE L1 5282 6168 0 2353 170 33 21 chr10 52872063 52872486 -87444279 - MSTA LTR MaLR 0 428 1 30 19 0 39 chr10 52872518 52872543 -87444222 + AT_rich Low_complexity Low_complexity 1 25 -25 1554 186 25 14 chr10 52872543 52872664 -87444101 + AluJb SINE Alu 1 119 -186 186 43 0 0 chr10 52872664 52872687 -87444078 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1554 186 25 14 chr10 52872687 52872867 -87443898 + AluJb SINE Alu 119 305 0 30 19 0 39 chr10 52872867 52872892 -87443873 + AT_rich Low_complexity Low_complexity 25 50 0 1018 177 15 5 chr10 52873263 52873461 -87443304 + L1PB1 LINE L1 1 200 -6663 7732 129 156 7 chr10 52873463 52874840 -87441925 + L1PB1 LINE L1 636 2217 -4646 4697 171 15 3 chr10 52874846 52876263 -87440502 + L1PB1 LINE L1 5072 6507 -360 288 198 30 20 chr10 52876268 52876369 -87440396 + (TA)n Simple_repeat Simple_repeat 1 102 0 2871 86 0 0 chr10 52876370 52876731 -87440034 + L1PB1 LINE L1 6507 6867 0 747 69 0 3 chr10 52876967 52877199 -87439566 - AluY SINE Alu -8 303 1 1749 227 44 94 chr10 52877385 52878358 -87438407 + L1MC5 LINE L1 6503 7439 -522 415 287 153 19 chr10 52878359 52878516 -87438249 - MER5A DNA MER1_type -3 186 9 234 250 35 35 chr10 52878523 52878639 -87438126 + L1MC5 LINE L1 7455 7570 -391 237 261 197 21 chr10 52878686 52878874 -87437891 + L1MC5 LINE L1 7696 7916 -45 1109 190 35 0 chr10 52879506 52879706 -87437059 + AluJb SINE Alu 86 292 -20 185 0 0 39 chr10 52879743 52879769 -87436996 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 44959 36 4 7 chr10 52879862 52886034 -87430731 - L1PA3 LINE L1 -1 6154 3 23 0 0 0 chr10 52886127 52886150 -87430615 + AT_rich Low_complexity Low_complexity 1 23 0 713 322 49 0 chr10 52886403 52886689 -87430076 + L1MEc LINE L1 94 393 -6003 385 241 69 9 chr10 52886870 52886986 -87429779 + L1MEc LINE L1 610 732 -5664 1674 237 70 48 chr10 52886998 52887808 -87428957 + L1M4 LINE L1 2863 3690 -2456 779 305 33 22 chr10 52887884 52888245 -87428520 + MER90 LTR ERV1 248 612 -2 223 309 32 32 chr10 52889284 52889378 -87427387 - MIR SINE MIR -108 154 61 267 257 0 0 chr10 52890374 52890444 -87426321 + L2 LINE L2 2883 2952 -320 2058 125 16 13 chr10 52891784 52892095 -87424670 - AluSx SINE Alu 0 312 1 1650 204 72 8 chr10 52892274 52892647 -87424118 - MLT2C1 LTR ERVL 0 397 1 1083 211 74 13 chr10 52892690 52892989 -87423776 + MER33 DNA MER1_type 4 320 -4 382 311 81 20 chr10 52894341 52894637 -87422128 + L1M4 LINE L1 3806 4119 -2027 342 282 18 9 chr10 52894672 52894782 -87421983 + MER90 LTR ERV1 209 319 -256 3028 118 12 0 chr10 52894786 52895210 -87421555 + MER57B LTR ERV1 1 429 -5 253 214 0 0 chr10 52895221 52895277 -87421488 + MER90 LTR ERV1 375 430 -184 2683 94 17 0 chr10 52895336 52895687 -87421078 - L1PA10 LINE L1 -5 6163 5807 181 183 0 133 chr10 52895701 52895761 -87421004 + MIR SINE MIR 103 154 -108 901 277 31 28 chr10 52896808 52897129 -87419636 - MER90 LTR ERV1 -9 605 284 2436 86 0 3 chr10 52899652 52899955 -87416810 - AluSx SINE Alu -10 302 1 265 298 39 45 chr10 52902356 52902534 -87414231 + L1ME LINE L1 3 179 -5891 1015 312 79 25 chr10 52902621 52903479 -87413286 + L1ME LINE L1 3377 4281 -1799 607 267 87 85 chr10 52903480 52904531 -87412234 + L1ME LINE L1 4454 5509 -595 991 256 22 4 chr10 52905505 52905735 -87411030 + MER70A LTR ERVL 1 234 -238 361 227 69 62 chr10 52905983 52906191 -87410574 - MLT1J2 LTR MaLR -240 206 1 1902 317 43 22 chr10 52906214 52907090 -87409675 - L2 LINE L2 -1535 1779 885 1096 217 105 101 chr10 52909343 52909676 -87407089 - MLT1D LTR MaLR 0 505 166 1533 225 16 32 chr10 52909676 52910045 -87406720 + MLT1A1 LTR MaLR 1 363 -2 1096 217 105 101 chr10 52910045 52910212 -87406553 - MLT1D LTR MaLR -339 166 1 207 0 0 0 chr10 52911782 52911805 -87404960 + (TC)n Simple_repeat Simple_repeat 2 24 0 1088 156 11 6 chr10 52911908 52912087 -87404678 - MLT1C LTR MaLR 0 467 288 1035 216 30 22 chr10 52912232 52912501 -87404264 - MLT1C LTR MaLR -170 297 27 476 214 84 51 chr10 52912636 52912814 -87403951 - L1M4 LINE L1 -840 5306 5123 683 167 95 14 chr10 52912992 52913202 -87403563 - L1M4 LINE L1 -2800 3346 3120 3370 271 73 37 chr10 52913276 52913879 -87402886 + L1ME3 LINE L1 2669 3249 -2913 2031 133 0 34 chr10 52913879 52914202 -87402563 + AluSx SINE Alu 1 312 0 3370 271 73 37 chr10 52914202 52916948 -87399817 + L1ME3 LINE L1 3249 6161 -1 26 0 0 0 chr10 52917217 52917243 -87399522 + AT_rich Low_complexity Low_complexity 1 26 0 212 139 0 23 chr10 52917248 52917291 -87399474 + (CTA)n Simple_repeat Simple_repeat 2 43 0 839 151 87 0 chr10 52917900 52918072 -87398693 - MER53 DNA DNA -2 187 1 285 307 0 10 chr10 52918305 52918406 -87398359 + MIR SINE MIR 28 127 -135 209 164 0 36 chr10 52919037 52919092 -87397673 + T-rich Low_complexity Low_complexity 4 56 0 1269 224 134 24 chr10 52919161 52919606 -87397159 + MLT1H LTR MaLR 1 534 -15 248 73 146 0 chr10 52920222 52920263 -87396502 + LTR32 LTR ERVL 3 49 -422 1138 171 66 13 chr10 52920263 52920491 -87396274 + LTR32 LTR ERVL 232 471 0 227 300 0 12 chr10 52922392 52922472 -87394293 + (CA)n Simple_repeat Simple_repeat 2 80 0 249 332 135 15 chr10 52922479 52922738 -87394027 + L2 LINE L2 2876 3165 -148 791 229 47 21 chr10 52922749 52922985 -87393780 - L1MB4 LINE L1 0 6180 5939 2194 71 7 52 chr10 52924059 52924367 -87392398 + AluY SINE Alu 1 294 -17 331 268 10 0 chr10 52924503 52924600 -87392165 + MIR SINE MIR 48 145 -117 1280 273 55 49 chr10 52924941 52925473 -87391292 - MER90 LTR ERV1 0 614 80 355 190 14 42 chr10 52927315 52927416 -87389349 - LTR41 LTR ERVL -2 793 689 317 206 15 0 chr10 52927914 52927982 -87388783 - LTR41 LTR ERVL -611 162 94 21 0 0 0 chr10 52979491 52979512 -87337253 + AT_rich Low_complexity Low_complexity 1 21 0 623 294 38 48 chr10 52979570 52979883 -87336882 + Charlie8 DNA MER1_type 118 427 -1990 243 0 0 0 chr10 52980278 52980305 -87336460 + (TG)n Simple_repeat Simple_repeat 2 28 0 1645 255 13 4 chr10 52981134 52981589 -87335176 + MER63C DNA MER1_type 49 507 -423 229 307 23 11 chr10 52981589 52981677 -87335088 + MIR SINE MIR 167 255 -7 843 214 53 42 chr10 52981769 52982233 -87334532 - MSTD LTR MaLR 0 396 2 457 322 82 6 chr10 52982246 52982429 -87334336 - MIR SINE MIR 0 262 66 23 105 0 0 chr10 52982488 52982574 -87334191 + AT_rich Low_complexity Low_complexity 1 86 0 289 269 13 0 chr10 52983047 52983196 -87333569 + (TA)n Simple_repeat Simple_repeat 1 151 0 1112 171 59 0 chr10 52983198 52983420 -87333345 - MER2 DNA MER2_type -1 344 110 192 152 0 0 chr10 52983450 52983483 -87333282 + (TG)n Simple_repeat Simple_repeat 2 34 0 11518 164 10 26 chr10 52983583 52984710 -87332055 - L1P3 LINE L1 -2884 3577 2434 378 57 0 0 chr10 52984710 52984763 -87332002 + (TG)n Simple_repeat Simple_repeat 2 54 0 2260 85 0 0 chr10 52984763 52985046 -87331719 - AluY SINE Alu -28 283 1 11518 164 10 26 chr10 52985046 52987488 -87329277 - L1P3 LINE L1 -4025 2436 3 183 320 27 0 chr10 52987871 52987946 -87328819 + MIR3 SINE MIR 127 203 -5 576 132 0 11 chr10 52988038 52988129 -87328636 + HY4 scRNA scRNA 1 90 -3 22 0 0 0 chr10 52988703 52988725 -87328040 + AT_rich Low_complexity Low_complexity 1 22 0 11085 132 47 39 chr10 52988898 52990259 -87326506 + Tigger1 DNA MER2_type 28 1377 -1041 2024 133 0 17 chr10 52990259 52990559 -87326206 - AluSx SINE Alu -17 295 1 11085 132 47 39 chr10 52990559 52991133 -87325632 + Tigger1 DNA MER2_type 1377 1983 -435 1940 137 40 7 chr10 52991133 52991433 -87325332 + AluJb SINE Alu 3 312 0 11085 132 47 39 chr10 52991433 52991601 -87325164 + Tigger1 DNA MER2_type 1983 2148 -270 1260 176 69 8 chr10 52991750 52992011 -87324754 + Tigger1 DNA MER2_type 2142 2418 0 460 286 24 0 chr10 52992135 52992261 -87324504 - L2 LINE L2 -10 3303 3175 23 54 0 0 chr10 52993178 52993215 -87323550 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr10 52993286 52993316 -87323449 + AT_rich Low_complexity Low_complexity 1 30 0 306 327 150 0 chr10 52996001 52996154 -87320611 - MIR SINE MIR -16 246 71 6861 55 6 3 chr10 52997173 52998089 -87318676 - L1PA8 LINE L1 -1 6171 5254 293 259 62 0 chr10 53000932 53001013 -87315752 - MIR SINE MIR -162 100 15 1892 77 45 0 chr10 53001933 53002180 -87314585 + AluY SINE Alu 44 301 -10 239 275 18 46 chr10 53002315 53002424 -87314341 + CT-rich Low_complexity Low_complexity 5 110 0 321 211 53 0 chr10 53002551 53002623 -87314142 + MER112 DNA MER1_type 6 81 -179 1751 202 34 52 chr10 53002623 53003047 -87313718 - MLT1C LTR MaLR 0 467 37 1883 150 30 24 chr10 53003047 53003420 -87313345 + THE1C LTR MaLR 1 375 0 9681 121 57 7 chr10 53003422 53004924 -87311841 + THE1C-int LTR MaLR 4 1580 0 2007 137 27 27 chr10 53004924 53005297 -87311468 + THE1C LTR MaLR 1 373 -2 1751 202 34 52 chr10 53005297 53005344 -87311421 - MLT1C LTR MaLR -429 38 1 361 254 139 17 chr10 53005344 53005517 -87311248 + MER112 DNA MER1_type 67 260 0 230 136 53 68 chr10 53005995 53006127 -87310638 + (CATAT)n Simple_repeat Simple_repeat 2 131 0 * 434 170 21 59 chr10 53006094 53006444 -87310321 + (TA)n Simple_repeat Simple_repeat 1 336 0 2391 176 16 6 chr10 53006448 53006949 -87309816 + L1MA4 LINE L1 5777 6282 -18 21 0 0 0 chr10 53007782 53007803 -87308962 + AT_rich Low_complexity Low_complexity 1 21 0 918 217 105 48 chr10 53008517 53008890 -87307875 + LTR37A LTR ERV1 5 398 -28 6478 75 67 5 chr10 53009811 53011275 -87305490 - L1PA8A LINE L1 -1 6130 4624 188 311 67 33 chr10 53011516 53011606 -87305159 - L2 LINE L2 -44 3228 3136 5848 64 5 2 chr10 53011997 53012791 -87303974 - L1PA6 LINE L1 -2 6467 5672 21116 75 3 6 chr10 53012937 53017556 -87299209 - L1PA6 LINE L1 -869 5592 993 1763 185 0 3 chr10 53017595 53017920 -87298845 - L1PA6 LINE L1 -6128 333 10 7798 121 7 2 chr10 53017932 53019200 -87297565 - L1P LINE L1 -1502 4644 3370 302 282 26 34 chr10 53021292 53021409 -87295356 - L1ME4a LINE L1 -2 6119 6004 1757 237 109 15 chr10 53021511 53022098 -87294667 - LTR48B LTR ERV1 -2 642 1 1791 274 107 37 chr10 53022916 53023947 -87292818 - L2 LINE L2 0 3313 2223 1401 275 54 9 chr10 53023957 53024009 -87292756 - MLT1J LTR MaLR 0 511 463 1765 144 0 0 chr10 53024009 53024265 -87292500 - AluSx SINE Alu -17 295 40 1401 275 54 9 chr10 53024265 53024659 -87292106 - MLT1J LTR MaLR -48 463 45 480 243 111 107 chr10 53024829 53025367 -87291398 - MLT1H1 LTR MaLR -7 548 3 380 284 130 32 chr10 53025571 53025801 -87290964 - MIR SINE MIR -6 256 4 339 282 0 0 chr10 53026678 53026763 -87290002 - HERV16 LTR ERVL -4831 165 81 24 0 0 0 chr10 53026785 53026809 -87289956 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 53027061 53027084 -87289681 + AT_rich Low_complexity Low_complexity 1 23 0 396 0 0 0 chr10 53029196 53029240 -87287525 + (TG)n Simple_repeat Simple_repeat 2 45 0 545 241 97 51 chr10 53029249 53029465 -87287300 + MIR SINE MIR 36 261 -1 476 364 0 0 chr10 53029875 53030062 -87286703 - MIR SINE MIR -26 236 50 254 343 65 0 chr10 53030351 53030459 -87286306 + L2 LINE L2 3158 3272 0 3583 152 36 6 chr10 53031182 53031866 -87284899 + MER67C LTR ERV1 1 705 -5 379 219 128 113 chr10 53032008 53032405 -87284360 - MER57A LTR ERV1 0 403 1 1512 120 174 0 chr10 53032415 53032657 -87284108 + AluSg SINE Alu 1 284 -26 183 146 0 0 chr10 53032657 53032698 -87284067 + (TA)n Simple_repeat Simple_repeat 1 41 0 848 176 64 11 chr10 53032778 53032966 -87283799 + Tigger3(Golem) DNA MER2_type 2831 3028 -1 315 317 56 21 chr10 53032966 53033108 -87283657 + L2 LINE L2 2621 2767 -547 13376 182 32 17 chr10 53033322 53034335 -87282430 + L1M1 LINE L1 60 1056 -6663 393 22 0 0 chr10 53034335 53034381 -87282384 + (CA)n Simple_repeat Simple_repeat 1 46 0 13376 182 32 17 chr10 53034381 53037777 -87278988 + L1M1 LINE L1 1056 5353 -2366 2048 139 3 19 chr10 53037777 53038094 -87278671 + AluSx SINE Alu 1 312 0 13376 182 32 17 chr10 53038094 53039979 -87276786 + L1M1 LINE L1 5353 7208 -511 591 158 4 36 chr10 53039981 53040448 -87276317 + (TA)n Simple_repeat Simple_repeat 1 452 0 633 99 0 62 chr10 53040468 53040660 -87276105 + (TA)n Simple_repeat Simple_repeat 1 180 0 738 41 74 33 chr10 53040665 53040935 -87275830 + (CATAT)n Simple_repeat Simple_repeat 1 281 0 362 107 82 19 chr10 53040990 53041149 -87275616 + (CATAT)n Simple_repeat Simple_repeat 2 170 0 2484 45 3 3 chr10 53041659 53041969 -87274796 - AluSx SINE Alu -2 310 1 232 150 0 0 chr10 53042224 53042264 -87274501 - MER45 DNA AcHobo -7 1574 1535 293 232 80 24 chr10 53042291 53042416 -87274349 - MER45 DNA AcHobo -814 139 8 294 317 55 40 chr10 53043051 53043250 -87273515 - MIR SINE MIR -55 207 6 487 289 147 18 chr10 53043662 53043935 -87272830 - L2 LINE L2 -1 3312 3005 2084 68 32 7 chr10 53045329 53045607 -87271158 - AluY SINE Alu -26 285 1 1332 44 0 0 chr10 53045766 53045924 -87270841 - AluY SINE Alu 0 311 154 306 0 0 0 chr10 53045974 53046008 -87270757 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 697 212 7 65 chr10 53046388 53046656 -87270109 + MER52A LTR ERV1 1 344 -1411 3862 155 0 45 chr10 53046666 53047419 -87269346 + MER52A LTR ERV1 1037 1755 0 26 0 0 0 chr10 53048488 53048514 -87268251 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 53049496 53049524 -87267241 + AT_rich Low_complexity Low_complexity 1 28 0 1118 272 43 66 chr10 53050318 53051046 -87265719 - L2 LINE L2 0 3313 2603 208 257 29 29 chr10 53052687 53052757 -87264008 + MIR SINE MIR 11 80 -182 899 325 151 36 chr10 53053850 53054230 -87262535 + L2 LINE L2 1909 2244 -1069 1696 157 21 11 chr10 53054230 53054516 -87262249 - AluJb SINE Alu -23 289 1 899 325 151 36 chr10 53054516 53055179 -87261586 + L2 LINE L2 2244 3066 -247 21 0 0 0 chr10 53056048 53056069 -87260696 + AT_rich Low_complexity Low_complexity 1 21 0 1200 155 0 5 chr10 53056986 53057199 -87259566 - MER6 DNA MER2_type 0 865 654 1536 173 123 13 chr10 53057216 53057597 -87259168 - LOR1b LTR ERV1 -38 423 1 1035 138 0 37 chr10 53057611 53057800 -87258965 - MER6 DNA MER2_type -214 651 470 415 290 65 28 chr10 53057835 53058083 -87258682 - MER34 LTR ERV1 -29 513 257 308 295 0 0 chr10 53058287 53058382 -87258383 - MER34 LTR ERV1 -447 95 1 2489 177 31 9 chr10 53058382 53058839 -87257926 - MER6 DNA MER2_type -398 467 1 1961 155 26 0 chr10 53059347 53059651 -87257114 + AluSx SINE Alu 1 312 0 185 224 0 61 chr10 53061715 53061764 -87255001 + MIR SINE MIR 217 262 0 499 211 130 0 chr10 53061878 53062001 -87254764 + MLT1C LTR MaLR 66 204 -263 23 0 0 0 chr10 53062089 53062112 -87254653 + AT_rich Low_complexity Low_complexity 1 23 0 207 345 23 40 chr10 53062120 53062294 -87254471 - MIR SINE MIR -15 247 77 180 309 22 96 chr10 53062943 53063079 -87253686 - L2 LINE L2 -204 3068 2943 1570 165 35 3 chr10 53063238 53063523 -87253242 - MER41E LTR ERV1 0 512 219 405 164 0 0 chr10 53063529 53063602 -87253163 - LTR23 LTR ERV1 -349 88 16 2131 107 0 13 chr10 53063638 53063973 -87252792 - AluSx SINE Alu 0 347 17 412 111 14 0 chr10 53063976 53064048 -87252717 - LTR23 LTR ERV1 -364 73 1 2221 114 3 0 chr10 53064254 53064551 -87252214 - AluSx SINE Alu -14 298 1 335 221 35 0 chr10 53065372 53065458 -87251307 + MER103 DNA DNA 10 98 -68 373 307 59 35 chr10 53065470 53065635 -87251130 - MIR SINE MIR 0 262 90 1941 162 120 3 chr10 53065635 53066017 -87250748 - MSTA LTR MaLR 0 428 2 373 307 59 35 chr10 53066017 53066053 -87250712 - MIR SINE MIR -172 90 56 310 277 112 21 chr10 53066602 53066864 -87249901 + L1ME LINE L1 5335 5626 -495 426 329 88 15 chr10 53067061 53067335 -87249430 + MLT1I LTR MaLR 98 391 -18 3076 204 62 46 chr10 53067542 53068382 -87248383 - L1MB5 LINE L1 0 6174 5322 771 147 7 22 chr10 53068392 53068528 -87248237 - FLAM_C SINE Alu -9 134 1 292 339 27 22 chr10 53068551 53068734 -87248031 - L1M4 LINE L1 -6009 533 350 1991 114 4 0 chr10 53069187 53069458 -87247307 + AluSg SINE Alu 25 296 -14 341 145 0 43 chr10 53069700 53069769 -87246996 + L1MA9 LINE L1 5941 6006 -306 1385 184 8 32 chr10 53069788 53069871 -87246894 + AluJo SINE Alu 41 124 -187 267 31 0 0 chr10 53069871 53069903 -87246862 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1385 184 8 32 chr10 53069903 53070096 -87246669 + AluJo SINE Alu 124 311 0 23 33 0 0 chr10 53070383 53070413 -87246352 + AT_rich Low_complexity Low_complexity 1 30 0 234 280 54 0 chr10 53071014 53071107 -87245658 - MIR3 SINE MIR -7 201 104 256 340 152 49 chr10 53071396 53071902 -87244863 + L3 LINE CR1 547 1104 -473 200 294 108 20 chr10 53072065 53072167 -87244598 + L3 LINE CR1 1139 1249 -328 298 276 253 24 chr10 53073176 53073346 -87243419 + L3 LINE CR1 1368 1576 -1 398 259 36 36 chr10 53074440 53074579 -87242186 + MIR SINE MIR 103 241 -21 224 333 48 29 chr10 53074670 53074775 -87241990 + MIR3 SINE MIR 12 118 -90 277 286 54 27 chr10 53075376 53075488 -87241277 - MIR SINE MIR -21 241 127 241 339 72 50 chr10 53076284 53076464 -87240301 + MIR3 SINE MIR 16 199 -9 439 280 19 34 chr10 53076789 53076818 -87239947 - MIR SINE MIR -80 128 100 1819 168 50 34 chr10 53076818 53077198 -87239567 + MLT1B LTR MaLR 5 390 0 439 280 19 34 chr10 53077198 53077327 -87239438 - MIR SINE MIR -108 100 20 655 293 65 16 chr10 53077475 53077721 -87239044 + MIR SINE MIR 3 260 -2 3431 162 28 9 chr10 53078424 53079104 -87237661 - L1MA8 LINE L1 -36 6255 5563 22 0 0 0 chr10 53079211 53079233 -87237532 + AT_rich Low_complexity Low_complexity 1 22 0 1533 286 36 25 chr10 53079333 53079860 -87236905 - L1M4b LINE L1 -6292 567 35 266 318 192 12 chr10 53079867 53080122 -87236643 + L3 LINE CR1 1067 1367 -210 207 333 22 0 chr10 53080291 53080381 -87236384 - L2 LINE L2 -671 2643 2552 2141 123 26 47 chr10 53082065 53082448 -87234317 + THE1C LTR MaLR 1 375 0 2700 161 72 24 chr10 53083059 53083638 -87233127 - L1PA14 LINE L1 -5 6156 5550 330 306 114 54 chr10 53083918 53084074 -87232691 - MLT1I LTR MaLR 0 409 264 2327 101 0 0 chr10 53084074 53084371 -87232394 + AluSg SINE Alu 1 297 -13 330 306 114 54 chr10 53084371 53084547 -87232218 - MLT1I LTR MaLR -145 264 57 1254 181 13 13 chr10 53084550 53084788 -87231977 - LTR32 LTR ERVL 0 471 234 287 151 38 0 chr10 53084809 53084862 -87231903 - LTR32 LTR ERVL -406 65 11 210 250 185 0 chr10 53086783 53086875 -87229890 + MIR SINE MIR 128 236 -26 210 303 45 0 chr10 53086889 53086955 -87229810 + L2 LINE L2 3204 3272 0 250 370 37 31 chr10 53087102 53087264 -87229501 + MIR3 SINE MIR 15 177 -31 233 214 18 18 chr10 53087962 53088018 -87228747 - MLT1J2 LTR MaLR -388 62 7 701 174 25 0 chr10 53088018 53088139 -87228626 + AluJb SINE Alu 2 125 -187 622 188 22 83 chr10 53088846 53089027 -87227738 - MLT1B LTR MaLR -16 374 205 479 216 162 14 chr10 53089090 53089238 -87227527 - MLT1B LTR MaLR -204 170 1 1566 195 26 0 chr10 53091996 53092145 -87224620 - AluJb SINE Alu -33 279 118 234 0 0 0 chr10 53092145 53092171 -87224594 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1566 195 26 0 chr10 53092171 53092293 -87224472 - AluJb SINE Alu -194 118 1 23 0 0 0 chr10 53093189 53093212 -87223553 + AT_rich Low_complexity Low_complexity 1 23 0 1368 269 52 58 chr10 53093679 53093889 -87222876 - L2 LINE L2 -51 3262 3052 698 188 8 15 chr10 53093889 53094022 -87222743 + FLAM_C SINE Alu 1 132 -1 1368 269 52 58 chr10 53094022 53094038 -87222727 - L2 LINE L2 -261 3052 3037 1162 140 50 146 chr10 53094038 53094359 -87222406 + AluJb SINE Alu 1 290 -12 1368 269 52 58 chr10 53094359 53094957 -87221808 - L2 LINE L2 -276 3037 2445 356 250 0 0 chr10 53094960 53095060 -87221705 + L1ME LINE L1 5672 5771 -393 701 98 23 30 chr10 53095176 53095308 -87221457 - L1MA2 LINE L1 0 6304 6174 1895 256 44 41 chr10 53095397 53096075 -87220690 - L1ME2 LINE L1 0 6164 5476 2344 97 0 0 chr10 53096075 53096373 -87220392 - AluSx SINE Alu -14 298 1 1895 256 44 41 chr10 53096373 53096676 -87220089 - L1ME2 LINE L1 -688 5476 5175 3745 123 67 71 chr10 53096719 53097507 -87219258 + LTR1 LTR ERV1 1 785 0 2229 90 10 0 chr10 53097650 53097951 -87218814 + AluSc SINE Alu 1 304 -5 1098 215 102 0 chr10 53097983 53098239 -87218526 + HUERS-P2 LTR ERV1 244 525 -2563 430 98 0 37 chr10 53098239 53098321 -87218444 + LTR1 LTR ERV1 707 785 0 980 241 77 69 chr10 53098461 53099175 -87217590 - L1ME2 LINE L1 -1140 5006 4287 31 26 0 0 chr10 53099213 53099251 -87217514 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 54 chr10 53099591 53099612 -87217153 + AT_rich Low_complexity Low_complexity 1 21 -14 2061 107 3 45 chr10 53099612 53099921 -87216844 + AluSx SINE Alu 1 296 -16 22 0 0 54 chr10 53099921 53099936 -87216829 + AT_rich Low_complexity Low_complexity 21 35 0 517 285 100 20 chr10 53101431 53101631 -87215134 - MIR SINE MIR 0 262 47 659 294 187 12 chr10 53101905 53102307 -87214458 - L1ME2 LINE L1 -2982 3164 2693 858 208 12 154 chr10 53102385 53102469 -87214296 - MLT1D LTR MaLR -1 504 410 4730 46 14 0 chr10 53102469 53103052 -87213713 + LTR10C LTR ERV1 1 591 0 858 208 12 154 chr10 53103052 53103370 -87213395 - MLT1D LTR MaLR -95 410 159 2538 141 118 31 chr10 53103373 53103892 -87212873 - LTR6A LTR ERV1 0 564 1 43299 207 26 3 chr10 53103892 53112570 -87204195 - HERVS71 LTR ERV1 -69 8909 4 2553 151 109 29 chr10 53112573 53113095 -87203670 - LTR6A LTR ERV1 0 564 1 439 256 6 80 chr10 53113096 53113272 -87203493 - MLT1D LTR MaLR -463 163 1 1885 226 54 50 chr10 53113377 53113974 -87202791 + MER77 LTR ERV1 1 599 -6 411 254 51 0 chr10 53114947 53115065 -87201700 - MLT1J2 LTR MaLR -307 143 20 2052 112 3 7 chr10 53115172 53115457 -87201308 - AluSc SINE Alu -25 284 1 349 201 173 20 chr10 53115463 53115610 -87201155 - MIR SINE MIR -78 184 20 189 115 0 0 chr10 53116464 53116490 -87200275 - L2 LINE L2 -26 3287 3262 1205 297 28 8 chr10 53117391 53117788 -87198977 - MLT1I LTR MaLR -4 405 1 2087 186 12 20 chr10 53118327 53118726 -87198039 + MER57A LTR ERV1 8 403 0 1982 132 3 20 chr10 53119536 53119840 -87196925 - AluSx SINE Alu -13 299 1 886 225 46 4 chr10 53119867 53120107 -87196658 - L1MA9 LINE L1 -38 6274 6025 1295 179 114 113 chr10 53120109 53120703 -87196062 - LTR49 LTR ERV1 0 595 1 1746 179 4 0 chr10 53120899 53121178 -87195587 + AluJb SINE Alu 1 280 -32 261 241 0 0 chr10 53121224 53121278 -87195487 - MIR SINE MIR -63 145 92 1985 209 104 21 chr10 53121391 53121404 -87195361 + LTR48B LTR ERV1 21 31 -613 7109 180 106 44 chr10 53121404 53123057 -87193708 - MER52A LTR ERV1 0 1755 1 1985 209 104 21 chr10 53123057 53123618 -87193147 + LTR48B LTR ERV1 31 643 -1 4335 166 42 38 chr10 53124167 53125065 -87191700 - MER4D LTR ERV1 0 903 2 1894 135 74 11 chr10 53125121 53125670 -87191095 + LTR24C LTR ERV1 7 633 -2 1957 169 6 6 chr10 53126016 53126370 -87190395 - L1PA16 LINE L1 -7 6159 5806 21 36 0 0 chr10 53126370 53126398 -87190367 + AT_rich Low_complexity Low_complexity 1 28 0 1953 158 57 49 chr10 53126472 53126757 -87190008 + LTR23 LTR ERV1 3 293 -144 692 195 31 0 chr10 53126757 53126885 -87189880 - FLAM_C SINE Alu 0 133 2 1953 158 57 49 chr10 53126885 53127024 -87189741 + LTR23 LTR ERV1 293 430 -7 207 240 0 40 chr10 53127038 53127088 -87189677 + MIR SINE MIR 215 262 0 419 177 69 54 chr10 53127690 53127718 -87189047 - MER34C LTR ERV1 -2 583 557 1473 205 11 4 chr10 53127718 53128023 -87188742 + AluJb SINE Alu 4 310 0 419 177 69 54 chr10 53128023 53128123 -87188642 - MER34C LTR ERV1 -28 557 452 3613 161 62 23 chr10 53128127 53128786 -87187979 + MER72 LTR ERV1 5 689 -33 339 111 194 14 chr10 53128829 53128901 -87187864 - MER34C LTR ERV1 -129 456 372 256 176 88 15 chr10 53128907 53128975 -87187790 + MER101B LTR ERV1 1 73 -497 937 257 101 3 chr10 53129229 53129517 -87187248 + LTR51 LTR ERV1 230 545 -126 1984 165 99 10 chr10 53129518 53129930 -87186835 - LTR47A LTR ERVL -1 451 3 983 215 4 77 chr10 53129931 53130178 -87186587 - MER4B-int LTR ERV1 -681 6077 5849 643 136 163 76 chr10 53130201 53130409 -87186356 - MER4B-int LTR ERV1 -436 6146 4568 844 220 23 127 chr10 53130616 53131086 -87185679 - LTR28 LTR ERV1 -41 894 1 5099 118 38 5 chr10 53131086 53131841 -87184924 - LTR28-int LTR ERV1 0 7091 6312 1776 188 0 3 chr10 53132051 53132355 -87184410 - AluJb SINE Alu -9 303 1 1665 201 3 6 chr10 53133339 53133652 -87183113 - AluJo SINE Alu 0 312 1 1637 157 131 52 chr10 53133771 53134198 -87182567 + LOR1b LTR ERV1 1 461 0 244 262 21 113 chr10 53134473 53134614 -87182151 + LTR35 LTR ERV1 1 128 -490 564 254 35 49 chr10 53134762 53135102 -87181663 + LTR35 LTR ERV1 348 617 -1 769 279 83 29 chr10 53135739 53136222 -87180543 - HAL1 LINE L1 -6 2501 1993 194 225 0 14 chr10 53136285 53136356 -87180409 + CT-rich Low_complexity Low_complexity 3 72 0 24 32 0 0 chr10 53136575 53136606 -87180159 + AT_rich Low_complexity Low_complexity 1 31 0 450 220 8 42 chr10 53136613 53136731 -87180034 - HAL1 LINE L1 -935 1572 1459 * 5177 230 59 38 chr10 53136723 53137477 -87179288 - L1MB7 LINE L1 -301 5883 5146 1223 185 150 0 chr10 53137477 53137737 -87179028 + AluJo SINE Alu 2 300 -2 5177 230 59 38 chr10 53137737 53139091 -87177674 - L1MB7 LINE L1 -1038 5146 3745 2091 139 3 0 chr10 53139091 53139394 -87177371 + AluSx SINE Alu 1 304 -8 5177 230 59 38 chr10 53139394 53139545 -87177220 - L1MB7 LINE L1 -2439 3745 3599 325 284 0 0 chr10 53139548 53139622 -87177143 - HAL1 LINE L1 -1261 1246 1173 3946 169 52 35 chr10 53139631 53140309 -87176456 - L1MB3 LINE L1 0 6183 5479 1644 174 3 24 chr10 53140309 53140607 -87176158 - AluJb SINE Alu -13 299 8 3946 169 52 35 chr10 53140607 53140813 -87175952 - L1MB3 LINE L1 -704 5479 5278 329 316 99 76 chr10 53141031 53141294 -87175471 - HAL1 LINE L1 -1606 901 633 274 357 145 20 chr10 53141306 53141555 -87175210 - HAL1 LINE L1 -1866 641 362 219 357 53 71 chr10 53141840 53142274 -87174491 + L2 LINE L2 2827 3252 -61 27 81 0 0 chr10 53142522 53142584 -87174181 + AT_rich Low_complexity Low_complexity 1 62 0 21 36 0 0 chr10 53142723 53142751 -87174014 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 53142940 53142964 -87173801 + AT_rich Low_complexity Low_complexity 1 24 0 2138 108 0 3 chr10 53143721 53144018 -87172747 + AluSg SINE Alu 1 296 -14 640 173 43 36 chr10 53144172 53144311 -87172454 - FLAM_C SINE Alu -1 142 3 435 273 113 103 chr10 53144438 53144944 -87171821 - L1ME4a LINE L1 -90 6031 5521 1633 178 14 17 chr10 53145142 53145435 -87171330 - AluJb SINE Alu -20 292 1 28 29 0 0 chr10 53145523 53145558 -87171207 + AT_rich Low_complexity Low_complexity 1 35 0 193 321 82 22 chr10 53145659 53145793 -87170972 + L2 LINE L2 2915 3056 -216 234 0 0 0 chr10 53146671 53146697 -87170068 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 630 272 89 0 chr10 53147216 53147418 -87169347 - MER58A DNA MER1_type 0 224 5 2135 172 52 7 chr10 53147585 53147993 -87168772 - MSTB LTR MaLR 0 426 1 226 186 0 68 chr10 53148008 53148067 -87168698 - Charlie8 DNA MER1_type -2026 391 337 27 29 0 0 chr10 53148197 53148231 -87168534 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr10 53148703 53148726 -87168039 + AT_rich Low_complexity Low_complexity 1 23 0 2176 111 0 0 chr10 53148769 53149058 -87167707 + AluSx SINE Alu 1 289 -23 716 186 203 6 chr10 53150690 53150867 -87165898 + MER31A LTR ERV1 1 212 -273 265 116 93 0 chr10 53151023 53151066 -87165699 + MER53 DNA DNA 1 47 -142 603 259 20 0 chr10 53152459 53152606 -87164159 + L1M4c LINE L1 12 161 -5794 840 156 0 16 chr10 53152606 53152734 -87164031 + FLAM_C SINE Alu 1 126 -17 213 39 0 0 chr10 53152735 53152761 -87164004 + (CA)n Simple_repeat Simple_repeat 2 27 0 1029 333 81 23 chr10 53152776 53153748 -87163017 + L1M4c LINE L1 166 882 -5073 2179 250 122 25 chr10 53153767 53155325 -87161440 + L1M4c LINE L1 828 2534 -3500 2388 210 148 21 chr10 53155357 53156161 -87160604 + L1M4c LINE L1 2667 3572 -2462 1715 174 50 42 chr10 53156902 53157304 -87159461 + L1MA9 LINE L1 5336 5740 -572 364 182 39 0 chr10 53157301 53157378 -87159387 + L1MA9 LINE L1 5946 6025 -287 * 246 211 105 35 chr10 53157609 53157666 -87159099 - tRNA-Arg-AGA tRNA tRNA -13 63 3 296 305 16 62 chr10 53158893 53159021 -87157744 - MIR SINE MIR -71 137 16 506 275 61 18 chr10 53159052 53159250 -87157515 + MIR SINE MIR 57 262 0 1703 185 0 4 chr10 53159448 53159729 -87157036 - AluJb SINE Alu -32 280 1 253 237 0 93 chr10 53159752 53159849 -87156916 - L1MA6 LINE L1 -6 6294 6207 1439 103 27 9 chr10 53159874 53160097 -87156668 + MER30 DNA MER1_type 1 227 -3 416 323 181 9 chr10 53160097 53160323 -87156442 - MLT1J2 LTR MaLR -173 277 13 2502 153 33 31 chr10 53161442 53161675 -87155090 - MER31A LTR ERV1 0 485 254 2083 209 22 17 chr10 53161675 53162134 -87154631 - MER65C LTR ERV1 0 461 1 2502 153 33 31 chr10 53162134 53162384 -87154381 - MER31A LTR ERV1 -231 254 1 203 161 0 0 chr10 53162547 53162578 -87154187 + T-rich Low_complexity Low_complexity 5 35 0 497 208 208 0 chr10 53162880 53163034 -87153731 - MER53 DNA DNA -3 186 1 3006 128 108 7 chr10 53163711 53164288 -87152477 - LTR24C LTR ERV1 0 635 1 1458 90 0 0 chr10 53165148 53165337 -87151428 - AluY SINE Alu -19 292 104 1644 190 98 62 chr10 53165397 53165794 -87150971 - LTR29 LTR ERV1 0 622 204 1875 131 183 14 chr10 53165794 53166160 -87150605 - MSTA LTR MaLR 0 428 1 1644 190 98 62 chr10 53166160 53166231 -87150534 - LTR29 LTR ERV1 -418 204 137 334 292 0 0 chr10 53166236 53166332 -87150433 - MER34 LTR ERV1 -446 96 1 183 42 0 0 chr10 53166699 53166723 -87150042 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr10 53166870 53166892 -87149873 + AT_rich Low_complexity Low_complexity 1 22 0 280 359 15 15 chr10 53167946 53168077 -87148688 + MIR SINE MIR 11 141 -121 349 261 34 0 chr10 53168333 53168421 -87148344 - L1M4 LINE L1 -2019 4127 4037 608 255 77 110 chr10 53168778 53169003 -87147762 - L1MEc LINE L1 -4806 1504 1273 2101 129 0 10 chr10 53169003 53169314 -87147451 - AluSx SINE Alu -1 311 4 608 255 77 110 chr10 53169314 53169708 -87147057 - L1MEc LINE L1 -5037 1273 905 894 236 101 4 chr10 53169716 53169953 -87146812 + MLT1E1 LTR MaLR 395 654 0 252 172 0 0 chr10 53171517 53171575 -87145190 + (TG)n Simple_repeat Simple_repeat 2 59 0 23 33 0 0 chr10 53171650 53171680 -87145085 + AT_rich Low_complexity Low_complexity 1 30 0 270 136 0 0 chr10 53171803 53171847 -87144918 + (T)n Simple_repeat Simple_repeat 1 44 0 241 175 109 3 chr10 53171910 53172129 -87144636 + AluJb SINE Alu 7 300 -2 1889 159 3 0 chr10 53172156 53172457 -87144308 - AluSx SINE Alu -10 302 1 357 321 66 71 chr10 53172576 53173363 -87143402 - L1MEc LINE L1 -5335 784 2 21 0 0 0 chr10 53173407 53173428 -87143337 + AT_rich Low_complexity Low_complexity 1 21 0 564 380 22 0 chr10 53174659 53174888 -87141877 - MIR SINE MIR -27 235 2 216 337 20 20 chr10 53175276 53175374 -87141391 - MIR SINE MIR -122 140 43 537 286 141 69 chr10 53175384 53175688 -87141077 - L2 LINE L2 -5 3308 2983 1572 195 75 47 chr10 53175699 53175966 -87140799 + MLT2C2 LTR ERVL 1 259 -205 2636 35 3 0 chr10 53175966 53176276 -87140489 + AluY SINE Alu 1 311 0 1572 195 75 47 chr10 53176276 53176419 -87140346 + MLT2C2 LTR ERVL 259 428 -36 295 60 40 0 chr10 53176419 53176469 -87140296 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1572 195 75 47 chr10 53176469 53176508 -87140257 + MLT2C2 LTR ERVL 428 464 0 712 215 99 18 chr10 53176512 53176813 -87139952 + MLT1A1 LTR MaLR 1 365 0 286 353 31 43 chr10 53176822 53177148 -87139617 - L2 LINE L2 0 3313 2992 215 372 44 7 chr10 53177279 53177416 -87139349 - L2 LINE L2 -372 2942 2801 1370 252 46 0 chr10 53177452 53177801 -87138964 + MLT1A1 LTR MaLR 1 365 0 207 307 121 21 chr10 53177828 53177968 -87138797 - MIR SINE MIR -56 206 53 22 0 0 0 chr10 53178234 53178256 -87138509 + AT_rich Low_complexity Low_complexity 1 22 0 2649 196 92 51 chr10 53179641 53180172 -87136593 + MER50 LTR ERV1 1 568 -166 2896 174 23 82 chr10 53180172 53180906 -87135859 + LTR8 LTR ERV1 1 691 0 2649 196 92 51 chr10 53180906 53181057 -87135708 + MER50 LTR ERV1 568 711 -23 611 196 76 46 chr10 53181086 53181227 -87135538 + L1MC3 LINE L1 5149 5284 -948 2298 82 0 3 chr10 53181227 53181520 -87135245 + AluY SINE Alu 13 304 -7 611 196 76 46 chr10 53181520 53181674 -87135091 + L1MC3 LINE L1 5284 5453 -779 516 177 0 201 chr10 53181679 53181733 -87135032 + L1MC3 LINE L1 5621 5684 -660 2015 115 0 0 chr10 53181733 53182012 -87134753 + AluY SINE Alu 1 279 -32 516 177 0 201 chr10 53182012 53182166 -87134599 + L1MC3 LINE L1 5684 5787 -557 4971 95 11 1 chr10 53182166 53182881 -87133884 - LTR30 LTR ERV1 0 722 1 3230 103 4 9 chr10 53182881 53183345 -87133420 - HERV30 LTR ERV1 0 8257 7796 27099 94 8 2 chr10 53183347 53186936 -87129829 - HERV30 LTR ERV1 -4644 3613 1 4903 99 10 4 chr10 53186936 53187654 -87129111 - LTR30 LTR ERV1 0 722 1 5310 227 85 40 chr10 53187654 53188022 -87128743 + L1MC3 LINE L1 5784 6134 -1861 2057 139 0 0 chr10 53188022 53188317 -87128448 + AluSx SINE Alu 6 300 -12 5310 227 85 40 chr10 53188317 53188571 -87128194 + L1MC3 LINE L1 6134 6375 -1620 180 0 0 0 chr10 53188571 53188591 -87128174 + (TA)n Simple_repeat Simple_repeat 2 21 0 5310 227 85 40 chr10 53188591 53189422 -87127343 + L1MC3 LINE L1 6375 7168 -827 180 77 0 0 chr10 53189422 53189448 -87127317 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 5310 227 85 40 chr10 53189448 53190145 -87126620 + L1MC3 LINE L1 7168 7992 -3 193 378 77 21 chr10 53190153 53190296 -87126469 - L2 LINE L2 -290 3023 2873 265 346 10 0 chr10 53191558 53191662 -87125103 - MIR SINE MIR -87 175 71 500 290 195 5 chr10 53191810 53192010 -87124755 - MIR SINE MIR -23 239 2 1603 187 14 10 chr10 53192141 53192435 -87124330 + AluJb SINE Alu 1 295 -17 1962 134 0 3 chr10 53192994 53193323 -87123442 - AluSq SINE Alu 0 328 1 262 339 18 0 chr10 53193450 53193559 -87123206 + MLT1J1 LTR MaLR 4 114 -332 393 332 55 50 chr10 53193610 53193809 -87122956 + MLT1J2 LTR MaLR 237 437 -10 421 302 116 5 chr10 53193998 53194213 -87122552 + MIR SINE MIR 15 253 -9 34 65 0 0 chr10 53194622 53194684 -87122081 + AT_rich Low_complexity Low_complexity 1 62 0 204 267 0 17 chr10 53196142 53196202 -87120563 + (TA)n Simple_repeat Simple_repeat 2 60 0 428 283 40 45 chr10 53196335 53196414 -87120351 - L1MC/D LINE L1 -2042 5766 5688 1595 157 59 3 chr10 53196414 53196701 -87120064 + AluSx SINE Alu 1 303 -9 428 283 40 45 chr10 53196701 53196844 -87119921 - L1MC/D LINE L1 -2120 5688 5545 1320 189 34 7 chr10 53197008 53197383 -87119382 - L1M1 LINE L1 -611 5567 5219 366 252 18 9 chr10 53197376 53197487 -87119278 - L1M1 LINE L1 -2541 3605 3494 * 2304 222 45 6 chr10 53197493 53197980 -87118785 - LTR53 LTR ERVL -13 506 1 1141 277 42 27 chr10 53197980 53198619 -87118146 - L1M4 LINE L1 -2641 3741 3093 328 229 0 0 chr10 53198620 53198690 -87118075 - L1M4 LINE L1 -4774 1610 1541 199 152 0 0 chr10 53199844 53199877 -87116888 + MIR SINE MIR 69 101 -161 466 310 91 16 chr10 53199878 53200065 -87116700 - L3 LINE CR1 -2 1575 1375 23 33 0 0 chr10 53200140 53200170 -87116595 + AT_rich Low_complexity Low_complexity 1 30 0 874 315 52 3 chr10 53200220 53200525 -87116240 + MLT1I LTR MaLR 1 320 -89 674 305 120 35 chr10 53202022 53202355 -87114410 + HAL1 LINE L1 992 1296 -1211 1595 180 10 14 chr10 53202355 53202650 -87114115 - AluJb SINE Alu -18 294 1 674 305 120 35 chr10 53202650 53203076 -87113689 + HAL1 LINE L1 1296 1815 -692 525 174 9 28 chr10 53204037 53204146 -87112619 + FLAM_A SINE Alu 23 129 -13 25 31 0 0 chr10 53204158 53204190 -87112575 + AT_rich Low_complexity Low_complexity 1 32 0 225 94 0 0 chr10 53204854 53204886 -87111879 + (TA)n Simple_repeat Simple_repeat 2 33 0 3342 162 40 7 chr10 53205969 53206574 -87110191 - MER67C LTR ERV1 0 710 86 305 149 15 30 chr10 53206944 53207011 -87109754 + MER53 DNA DNA 1 66 -123 443 297 39 0 chr10 53207251 53207379 -87109386 - MIR SINE MIR -6 256 124 219 349 23 39 chr10 53207481 53207610 -87109155 + MIR3 SINE MIR 41 167 -41 369 0 0 0 chr10 53208179 53208220 -87108545 + (TC)n Simple_repeat Simple_repeat 1 41 0 1550 204 115 85 chr10 53209434 53209983 -87106782 - MLT1F1 LTR MaLR 0 567 8 441 41 27 14 chr10 53210690 53210763 -87106002 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 313 355 153 22 chr10 53211031 53211352 -87105413 - L3 LINE CR1 -3 1574 1212 7155 208 47 29 chr10 53211900 53214777 -87101988 - L1MCa LINE L1 -3401 3025 5 586 348 75 19 chr10 53215772 53216039 -87100726 + L2 LINE L2 1106 1387 -1927 421 284 8 31 chr10 53216040 53216167 -87100598 + L2 LINE L2 1504 1627 -1687 1931 115 10 0 chr10 53216215 53216503 -87100262 - L1PB1 LINE L1 -3 6148 5858 5650 178 29 45 chr10 53216539 53218286 -87098479 - L1PB1 LINE L1 -278 5873 4020 3360 119 61 46 chr10 53218284 53218958 -87097807 + L1PBa LINE L1 1778 2461 -4402 * 2043 301 93 28 chr10 53218960 53219429 -87097336 + L2 LINE L2 1714 2151 -1163 2356 81 10 0 chr10 53219429 53219726 -87097039 - AluY SINE Alu -11 300 1 2043 301 93 28 chr10 53219726 53220227 -87096538 + L2 LINE L2 2151 2747 -567 535 159 35 55 chr10 53221066 53221211 -87095554 - L1MA6 LINE L1 -11 6289 6148 1603 173 18 7 chr10 53223085 53223388 -87093377 - AluJb SINE Alu 0 306 1 226 345 21 49 chr10 53223615 53223757 -87093008 - MIR3 SINE MIR -21 187 50 3169 94 2 9 chr10 53223837 53224294 -87092471 + L1PB1 LINE L1 5698 6151 0 21 0 0 0 chr10 53224465 53224486 -87092279 + AT_rich Low_complexity Low_complexity 1 21 0 1649 193 45 69 chr10 53224498 53224697 -87092068 + MSTD LTR MaLR 3 188 -208 1602 186 7 10 chr10 53224697 53224993 -87091772 + AluJo SINE Alu 11 305 -7 1649 193 45 69 chr10 53224993 53225197 -87091568 + MSTD LTR MaLR 188 396 0 334 328 32 21 chr10 53226175 53226364 -87090401 + MIR SINE MIR 13 203 -59 2099 124 3 0 chr10 53226424 53226714 -87090051 + AluSx SINE Alu 1 291 -21 275 300 100 0 chr10 53227122 53227222 -87089543 + MIR3 SINE MIR 45 154 -54 397 258 45 19 chr10 53227263 53227418 -87089347 - MER103 DNA DNA -2 164 6 1514 235 74 92 chr10 53228116 53228754 -87088011 - LTR41 LTR ERVL -147 626 1 1608 232 114 68 chr10 53228842 53229462 -87087303 + MLT1E1 LTR MaLR 6 654 0 365 275 0 90 chr10 53231283 53231444 -87085321 - MIR3 SINE MIR -31 177 35 370 195 242 8 chr10 53232032 53232160 -87084605 - MER104 DNA Tc2 0 180 23 244 363 20 20 chr10 53232263 53232365 -87084400 + L2 LINE L2 2952 3053 -219 1399 189 56 3 chr10 53232716 53233002 -87083763 - AluJo SINE Alu -10 302 2 862 206 78 138 chr10 53233781 53233892 -87082873 + MLT1B LTR MaLR 3 119 -271 3296 151 39 7 chr10 53233892 53234476 -87082289 + LTR26 LTR ERV1 1 603 0 862 206 78 138 chr10 53234476 53234516 -87082249 + MLT1B LTR MaLR 119 160 -230 1009 177 0 0 chr10 53234516 53234674 -87082091 + FAM SINE Alu 1 158 -17 862 206 78 138 chr10 53234674 53234934 -87081831 + MLT1B LTR MaLR 160 390 0 317 382 38 27 chr10 53235368 53235554 -87081211 - MIR SINE MIR -71 191 4 496 370 61 20 chr10 53236339 53236734 -87080031 + L1ME LINE L1 101 511 -5559 346 333 13 26 chr10 53236789 53236945 -87079820 + L1ME1 LINE L1 260 413 -5657 2031 249 108 36 chr10 53236954 53237566 -87079199 + L1ME1 LINE L1 4566 5133 -1135 1447 194 27 14 chr10 53237566 53237860 -87078905 + AluJo SINE Alu 1 298 -14 2031 249 108 36 chr10 53237860 53238676 -87078089 + L1ME1 LINE L1 5133 6266 -2 25 0 0 0 chr10 53238711 53238736 -87078029 + AT_rich Low_complexity Low_complexity 1 25 0 12308 200 34 32 chr10 53238894 53241049 -87075716 - L1PA16 LINE L1 -5 6864 4717 2159 112 0 20 chr10 53241049 53241352 -87075413 - AluSg SINE Alu -11 299 3 12308 200 34 32 chr10 53241352 53242345 -87074420 - L1PA16 LINE L1 -2152 4717 3728 2137 114 0 7 chr10 53242345 53242642 -87074123 - AluSg SINE Alu -13 297 3 12308 200 34 32 chr10 53242642 53244833 -87071932 - L1PA16 LINE L1 -3141 3728 1546 5650 91 1 4 chr10 53244845 53245618 -87071147 - L1PA8A LINE L1 0 6131 5361 * 6197 115 19 1 chr10 53245615 53246586 -87070179 + L1PA8A LINE L1 4369 5356 -790 * 6318 190 207 2 chr10 53246575 53247877 -87068888 - L1PA16 LINE L1 -5279 1570 2 603 247 52 32 chr10 53248872 53249207 -87067558 - LTR35 LTR ERV1 0 677 191 442 157 11 22 chr10 53249662 53249751 -87067014 - MLT1D LTR MaLR 0 505 418 382 238 105 29 chr10 53249785 53249890 -87066875 - L2 LINE L2 -10 3303 3191 216 367 61 10 chr10 53250509 53250607 -87066158 + MIR SINE MIR 47 149 -113 451 270 94 6 chr10 53250810 53250969 -87065796 + MIR SINE MIR 12 184 -78 943 226 79 33 chr10 53251030 53251335 -87065430 - MER63 DNA MER1_type -1 1061 743 4659 181 45 1 chr10 53251406 53252231 -87064534 + MSTA-int LTR MaLR 790 1650 -1 2266 163 31 19 chr10 53252238 53252661 -87064104 + MSTA LTR MaLR 1 428 0 2968 221 66 17 chr10 53252661 53252877 -87063888 - L1MC2 LINE L1 -294 6050 5846 180 0 0 0 chr10 53252877 53252897 -87063868 + (ATTTG)n Simple_repeat Simple_repeat 2 21 0 2968 221 66 17 chr10 53252897 53254004 -87062761 - L1MC2 LINE L1 -498 5846 4668 2106 146 30 19 chr10 53254766 53255137 -87061628 + THE1C LTR MaLR 1 375 0 10048 122 19 32 chr10 53255137 53256738 -87060027 + THE1C-int LTR MaLR 1 1580 0 1948 148 38 27 chr10 53256738 53257109 -87059656 + THE1C LTR MaLR 1 375 0 2114 156 60 23 chr10 53257969 53258393 -87058372 - MSTB LTR MaLR 0 426 1 369 298 0 9 chr10 53258559 53258673 -87058092 + L2 LINE L2 3193 3305 -8 1620 78 9 5 chr10 53259059 53259277 -87057488 - AluY SINE Alu -8 303 85 2836 6 0 6 chr10 53259561 53259874 -87056891 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr10 53261557 53261578 -87055187 + AT_rich Low_complexity Low_complexity 1 21 0 1921 265 29 13 chr10 53262473 53262994 -87053771 + L1ME1 LINE L1 5620 6148 -18 23 86 0 0 chr10 53263418 53263476 -87053289 + AT_rich Low_complexity Low_complexity 1 58 0 497 260 20 47 chr10 53264477 53264627 -87052138 + MIR SINE MIR 86 231 -31 303 146 0 0 chr10 53264831 53264886 -87051879 + (CA)n Simple_repeat Simple_repeat 2 56 0 2124 121 3 0 chr10 53265145 53265435 -87051330 - AluSx SINE Alu -13 299 9 1626 179 40 10 chr10 53265485 53265781 -87050984 + AluJo SINE Alu 1 305 -7 948 127 0 0 chr10 53266661 53266795 -87049970 + AluSg/x SINE Alu 166 299 -13 724 169 0 0 chr10 53267226 53267377 -87049388 + FLAM_C SINE Alu 1 151 0 23 33 0 0 chr10 53268486 53268516 -87048249 + AT_rich Low_complexity Low_complexity 1 30 0 406 114 26 0 chr10 53269103 53269183 -87047582 - MLT1D LTR MaLR 0 505 439 1341 148 10 5 chr10 53269249 53269458 -87047307 - THE1B LTR MaLR 0 364 155 2203 119 0 0 chr10 53269489 53269784 -87046981 + AluSq SINE Alu 1 295 -18 28915 82 10 13 chr10 53269784 53273811 -87042954 + L1P LINE L1 2 4017 -2129 1172 175 27 55 chr10 53273910 53274167 -87042598 + MLT1D LTR MaLR 254 503 -2 26 50 0 0 chr10 53274519 53274559 -87042206 + AT_rich Low_complexity Low_complexity 1 40 0 841 281 56 8 chr10 53274576 53274900 -87041865 + L2 LINE L2 2719 3055 -258 301 109 0 0 chr10 53274965 53275011 -87041754 + MADE1 DNA Mariner 1 46 -34 2996 58 10 0 chr10 53275204 53275600 -87041165 + L1P LINE L1 4653 5052 -1094 1537 195 29 44 chr10 53275645 53276030 -87040735 + MLT1B LTR MaLR 1 379 -11 442 327 6 6 chr10 53276038 53276194 -87040571 - MIR SINE MIR -7 255 100 459 302 31 31 chr10 53276299 53276428 -87040337 - L2 LINE L2 -1 3271 3143 2789 176 64 70 chr10 53276835 53277566 -87039199 + LTR8A LTR ERV1 1 727 0 207 0 0 0 chr10 53278077 53278100 -87038665 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 1768 136 10 52 chr10 53278201 53278511 -87038254 - AluSx SINE Alu -15 297 1 242 294 33 0 chr10 53279259 53279351 -87037414 + CT-rich Low_complexity Low_complexity 1 95 0 2020 203 57 10 chr10 53279406 53279811 -87036954 - MER21B LTR ERV1 -361 502 79 642 221 0 22 chr10 53279812 53279948 -87036817 + FLAM_C SINE Alu 1 133 -10 406 227 0 0 chr10 53279957 53280032 -87036733 - MER21B LTR ERV1 -779 84 10 7878 185 83 41 chr10 53280122 53281097 -87035668 - MER21B-int LTR ERV1 -59 4132 3200 1541 156 51 0 chr10 53281097 53281353 -87035412 - AluSq SINE Alu -19 294 26 7878 185 83 41 chr10 53281353 53282293 -87034472 - MER21B-int LTR ERV1 -991 3200 2072 581 179 18 18 chr10 53282294 53282406 -87034359 - MER21B LTR ERV1 -423 440 329 243 88 0 0 chr10 53283430 53283464 -87033301 + (TAA)n Simple_repeat Simple_repeat 1 34 0 184 149 43 0 chr10 53284023 53284070 -87032695 + CT-rich Low_complexity Low_complexity 3 51 0 264 276 82 8 chr10 53284076 53284210 -87032555 - L1ME4a LINE L1 -13 6108 5965 293 279 123 39 chr10 53284259 53284438 -87032327 + MLT1L LTR MaLR 398 591 -24 1926 130 0 21 chr10 53284506 53284791 -87031974 - AluSx SINE Alu -28 284 6 685 232 61 22 chr10 53284834 53285015 -87031750 - MER5A DNA MER1_type 0 189 2 1514 168 132 43 chr10 53285157 53285550 -87031215 + MSTA LTR MaLR 1 428 0 28 29 0 0 chr10 53286944 53286979 -87029786 + AT_rich Low_complexity Low_complexity 1 35 0 351 0 0 0 chr10 53290182 53290221 -87026544 + (TG)n Simple_repeat Simple_repeat 1 39 0 193 169 34 0 chr10 53290363 53290422 -87026343 + (TA)n Simple_repeat Simple_repeat 2 62 0 310 309 12 0 chr10 53290962 53291043 -87025722 - MIR SINE MIR -117 145 64 789 258 77 32 chr10 53292329 53292639 -87024126 + MER110 LTR ERV1 166 489 -2 228 336 53 18 chr10 53292646 53292759 -87024006 - MIR SINE MIR -58 150 34 471 328 121 5 chr10 53292982 53293180 -87023585 - MIR SINE MIR -40 222 2 220 123 18 70 chr10 53294073 53294130 -87022635 + T-rich Low_complexity Low_complexity 2 55 0 242 325 53 18 chr10 53294286 53294400 -87022365 + L2 LINE L2 2835 2952 -361 204 278 0 78 chr10 53295478 53295568 -87021197 + L2 LINE L2 2988 3070 -243 331 109 0 0 chr10 53295793 53295848 -87020917 + L1MA9 LINE L1 6256 6310 -2 186 300 0 0 chr10 53296270 53296320 -87020445 - MER5A DNA MER1_type -83 106 57 24 32 0 0 chr10 53296389 53296420 -87020345 + AT_rich Low_complexity Low_complexity 1 31 0 201 306 0 42 chr10 53297342 53297414 -87019351 + MIR3 SINE MIR 139 207 -1 5098 51 49 4 chr10 53297514 53298205 -87018560 - LTR30 LTR ERV1 0 722 1 240 35 0 0 chr10 53298323 53298352 -87018413 + (T)n Simple_repeat Simple_repeat 1 29 0 2601 174 22 110 chr10 53298818 53299573 -87017192 + LTR8 LTR ERV1 1 689 -2 1623 170 118 16 chr10 53299991 53300297 -87016468 + MER1B DNA MER1_type 1 337 0 657 340 5 0 chr10 53300964 53301170 -87015595 + MER110-int LTR ERV1 2441 2647 -2000 296 280 0 40 chr10 53301214 53301289 -87015476 + MER110-int LTR ERV1 2744 2815 -1832 200 132 0 26 chr10 53302598 53302636 -87014129 + (TAAAAA)n Simple_repeat Simple_repeat 1 37 0 595 250 0 7 chr10 53302981 53303133 -87013632 + L1MB7 LINE L1 6024 6174 -10 438 215 18 34 chr10 53303150 53303326 -87013439 + MER110 LTR ERV1 18 169 -322 3099 138 6 10 chr10 53303383 53303891 -87012874 - L1PA16 LINE L1 -9 6157 5652 * 10693 103 9 2 chr10 53303887 53306226 -87010539 - L1PA8 LINE L1 -14 6158 3808 564 300 34 48 chr10 53306247 53306540 -87010225 + MER110 LTR ERV1 187 475 -16 22 0 0 0 chr10 53306671 53306693 -87010072 + AT_rich Low_complexity Low_complexity 1 22 0 426 239 26 43 chr10 53307671 53307788 -87008977 + MER5A DNA MER1_type 4 118 -71 246 325 146 7 chr10 53308682 53308833 -87007932 - MIR SINE MIR -38 224 53 285 98 0 0 chr10 53309322 53309363 -87007402 + (TCC)n Simple_repeat Simple_repeat 2 42 0 2032 135 20 0 chr10 53309363 53309659 -87007106 - AluSx SINE Alu -10 302 1 21 36 0 0 chr10 53309910 53309938 -87006827 + AT_rich Low_complexity Low_complexity 1 28 0 458 196 54 0 chr10 53310096 53310188 -87006577 + FRAM SINE Alu 1 94 -82 22 35 0 0 chr10 53310586 53310615 -87006150 + AT_rich Low_complexity Low_complexity 1 29 0 298 350 50 0 chr10 53311200 53311440 -87005325 + L1MC4a LINE L1 3664 3915 -2231 236 267 11 33 chr10 53311539 53311629 -87005136 + (CATATA)n Simple_repeat Simple_repeat 4 91 0 371 294 127 48 chr10 53311670 53312400 -87004365 + L1MC4a LINE L1 4058 4870 -1276 5841 150 61 35 chr10 53312400 53313600 -87003165 + Tigger3b DNA MER2_type 1 1231 0 371 294 127 48 chr10 53313600 53313740 -87003025 + L1MC4a LINE L1 4870 4997 -1149 4331 133 181 7 chr10 53313886 53314846 -87001919 - MER11B LTR ERVK 0 1236 1 2499 260 78 47 chr10 53315101 53315519 -87001246 + L1MC4a LINE L1 5398 5802 -2006 2122 101 3 7 chr10 53315519 53315806 -87000959 + AluSx SINE Alu 4 289 -23 2499 260 78 47 chr10 53315806 53316572 -87000193 + L1MC4a LINE L1 5802 6618 -1190 2016 254 76 34 chr10 53316577 53317140 -86999625 - MLT1E LTR MaLR 0 593 7 504 277 69 47 chr10 53318313 53318355 -86998410 - MLT2E LTR ERVL -2 626 586 1939 163 37 8 chr10 53318355 53318710 -86998055 + MLT1A1 LTR MaLR 1 365 0 504 277 69 47 chr10 53318710 53319194 -86997571 - MLT2E LTR ERVL -42 586 3 201 74 0 0 chr10 53320239 53320266 -86996499 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 415 290 62 0 chr10 53320428 53320590 -86996175 + HAL1 LINE L1 48 219 -2288 235 207 17 35 chr10 53320602 53320660 -86996105 + HAL1 LINE L1 266 322 -2185 519 266 36 0 chr10 53320744 53320883 -86995882 + MSTB LTR MaLR 1 144 -282 210 301 32 81 chr10 53320902 53321025 -86995740 - L2 LINE L2 -229 3043 2927 21 36 0 0 chr10 53323564 53323592 -86993173 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr10 53323669 53323709 -86993056 + AT_rich Low_complexity Low_complexity 1 40 0 29 28 0 0 chr10 53323757 53323793 -86992972 + AT_rich Low_complexity Low_complexity 1 36 0 311 333 117 6 chr10 53324783 53324954 -86991811 - MIR SINE MIR -54 208 19 373 315 0 0 chr10 53325625 53325736 -86991029 - MER94 DNA DNA -5 129 19 1367 261 82 5 chr10 53327002 53327370 -86989395 + MSTD LTR MaLR 1 396 0 745 213 30 12 chr10 53327371 53327540 -86989225 + MSTD-int LTR MaLR 2 173 -1562 * 1004 257 11 22 chr10 53327537 53327809 -86988956 + MSTD-int LTR MaLR 408 676 -1059 1875 128 0 0 chr10 53327810 53328067 -86988698 + AluSx SINE Alu 3 259 -53 1346 199 86 3 chr10 53328075 53328366 -86988399 + MSTD-int LTR MaLR 1421 1735 0 1430 236 88 8 chr10 53328368 53328733 -86988032 + MSTD LTR MaLR 3 396 0 270 0 0 0 chr10 53328824 53328854 -86987911 + (T)n Simple_repeat Simple_repeat 1 30 0 194 300 25 50 chr10 53328962 53329042 -86987723 - MER5A DNA MER1_type -72 117 40 653 158 14 48 chr10 53330761 53330907 -86985858 + L1MA6 LINE L1 6148 6288 -12 622 262 78 45 chr10 53330932 53331144 -86985621 + MIR SINE MIR 4 216 -46 808 238 6 6 chr10 53333491 53333672 -86983093 + L1MC1 LINE L1 3964 4144 -2002 745 245 6 0 chr10 53333673 53333832 -86982933 + MSTD LTR MaLR 2 161 -204 4688 215 73 9 chr10 53333832 53335848 -86980917 + L1MC1 LINE L1 4186 6332 -1 294 138 17 17 chr10 53335873 53335931 -86980834 - MLT1H LTR MaLR 0 549 492 2293 200 30 84 chr10 53336071 53336595 -86980170 + LTR31 LTR ERV1 1 485 -134 751 167 14 0 chr10 53336595 53336733 -86980032 - L1PB4 LINE L1 -17 6139 6000 2293 200 30 84 chr10 53336733 53336847 -86979918 + LTR31 LTR ERV1 485 604 -15 405 335 70 22 chr10 53337060 53337287 -86979478 + MIR SINE MIR 11 248 -14 3133 241 53 89 chr10 53337737 53338845 -86977920 - L1MC3 LINE L1 -3 7782 6715 21 71 0 0 chr10 53338860 53338902 -86977863 + AT_rich Low_complexity Low_complexity 1 42 0 958 194 0 49 chr10 53338931 53339178 -86977587 - L1MC3 LINE L1 0 7785 7551 * 2653 174 49 6 chr10 53339160 53339695 -86977070 - L1MB1 LINE L1 -12 6177 5620 765 200 96 26 chr10 53339702 53339972 -86976793 + L1MB1 LINE L1 3065 3353 -2793 180 0 0 0 chr10 53339981 53340001 -86976764 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 302 263 50 0 chr10 53340001 53340081 -86976684 - MIR SINE MIR -81 181 98 2076 160 11 0 chr10 53340220 53340583 -86976182 + L1PB2 LINE L1 5782 6148 -3 281 290 76 0 chr10 53340595 53340740 -86976025 + L1MB1 LINE L1 3875 4030 -2116 315 319 26 17 chr10 53340743 53340859 -86975906 + MER5B DNA MER1_type 62 178 0 4309 202 30 21 chr10 53340889 53342663 -86974102 + L1MB1 LINE L1 4353 6151 -17 30 27 0 0 chr10 53342691 53342728 -86974037 + AT_rich Low_complexity Low_complexity 1 37 0 48 77 0 0 chr10 53342791 53342895 -86973870 + AT_rich Low_complexity Low_complexity 1 104 0 1922 371 64 32 chr10 53343707 53345077 -86971688 - HERV16 LTR ERVL -1348 4416 3091 1583 191 132 20 chr10 53345077 53345433 -86971332 + MSTD LTR MaLR 1 396 0 1922 371 64 32 chr10 53345433 53345622 -86971143 - HERV16 LTR ERVL -2673 3091 2909 2731 102 0 0 chr10 53345622 53345986 -86970779 + THE1B LTR MaLR 1 364 0 10271 111 19 33 chr10 53345986 53347589 -86969176 + THE1B-int LTR MaLR 1 1580 0 2523 111 14 0 chr10 53347589 53347948 -86968817 + THE1B LTR MaLR 1 364 0 1922 371 64 32 chr10 53347948 53348522 -86968243 - HERV16 LTR ERVL -2854 2910 2212 636 340 77 22 chr10 53348525 53349129 -86967636 - HERV16 LTR ERVL -3263 1733 1031 468 275 60 74 chr10 53349129 53349398 -86967367 - L1MEd LINE L1 -5015 1104 840 199 177 32 0 chr10 53350393 53350455 -86966310 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 1599 145 47 179 chr10 53351630 53352121 -86964644 + MSTB LTR MaLR 1 426 0 193 221 73 44 chr10 53353317 53353385 -86963380 - MIR SINE MIR -77 185 116 231 200 0 0 chr10 53353526 53353571 -86963194 - MLT2C1 LTR ERVL -352 45 1 3696 179 28 26 chr10 53353997 53354796 -86961969 - L1MA4 LINE L1 -4 6296 5497 392 171 0 0 chr10 53354796 53354872 -86961893 + L1 LINE L1 4256 4331 -1815 27 29 0 0 chr10 53354876 53354910 -86961855 + AT_rich Low_complexity Low_complexity 1 34 0 3745 200 18 34 chr10 53355028 53356544 -86960221 - L1MB1 LINE L1 -6 6398 4910 920 218 73 28 chr10 53356641 53356995 -86959770 - L1MB1 LINE L1 -2682 3700 3331 7415 27 8 0 chr10 53356995 53358248 -86958517 - L1PA3 LINE L1 -14 6141 4885 4561 28 0 0 chr10 53358248 53358792 -86957973 + L1P LINE L1 1697 2240 -3906 2197 267 64 40 chr10 53358799 53359637 -86957128 - L1MB1 LINE L1 -3056 3326 2509 2052 139 128 8 chr10 53359637 53360019 -86956746 + MSTA LTR MaLR 1 428 0 2197 267 64 40 chr10 53360019 53361138 -86955627 - L1MB1 LINE L1 -3873 2509 1240 2393 230 117 34 chr10 53361652 53362619 -86954146 + L1MC1 LINE L1 3960 5006 -1140 3789 180 132 42 chr10 53362655 53363647 -86953118 + L1MC1 LINE L1 5186 6267 -66 2065 87 30 45 chr10 53363718 53364050 -86952715 + MLT2A1 LTR ERVL 1 327 -117 4057 212 56 18 chr10 53364052 53364324 -86952441 + MSTA-int LTR MaLR 678 938 -713 1784 161 140 11 chr10 53364324 53364703 -86952062 + MSTA LTR MaLR 1 428 0 4057 212 56 18 chr10 53364703 53365345 -86951420 + MSTA-int LTR MaLR 938 1627 -24 1781 217 60 31 chr10 53365345 53365368 -86951397 + MLT2B1 LTR ERVL 24 45 -475 1761 189 130 0 chr10 53365368 53365744 -86951021 + MSTA LTR MaLR 1 425 -3 1781 217 60 31 chr10 53365744 53366203 -86950562 + MLT2B1 LTR ERVL 45 520 0 232 336 28 19 chr10 53366923 53367030 -86949735 + MIR SINE MIR 36 143 -65 306 329 138 0 chr10 53367810 53367962 -86948803 + MIR3 SINE MIR 5 177 -31 27 0 0 0 chr10 53368436 53368463 -86948302 + AT_rich Low_complexity Low_complexity 1 27 0 3472 196 21 77 chr10 53369681 53370509 -86946256 - L1MB1 LINE L1 -1 5991 5230 1562 172 37 0 chr10 53370509 53370782 -86945983 - AluJo SINE Alu -29 283 1 3472 196 21 77 chr10 53370782 53371196 -86945569 - L1MB1 LINE L1 -762 5230 4794 2233 264 104 25 chr10 53371202 53372444 -86944321 - L1MB1 LINE L1 -3815 2155 977 2524 32 3 25 chr10 53372444 53372759 -86944006 - AluYa5 SINE Alu -3 308 1 2233 264 104 25 chr10 53372759 53373213 -86943552 - L1MB1 LINE L1 -4993 977 560 324 345 31 71 chr10 53373214 53373469 -86943296 - L1MB1 LINE L1 -5379 512 268 4672 188 19 12 chr10 53373561 53374675 -86942090 - L1PBa LINE L1 -2972 3890 2771 495 319 61 96 chr10 53375007 53375806 -86940959 - L1M4 LINE L1 -854 5292 4522 405 301 68 45 chr10 53375794 53376103 -86940662 - L1M4 LINE L1 -2018 4128 3813 * 648 325 103 47 chr10 53376194 53377169 -86939596 - L1M4 LINE L1 -2505 3641 2613 244 192 55 27 chr10 53378486 53378559 -86938206 + MLT1I LTR MaLR 5 79 -330 206 352 14 42 chr10 53379187 53379329 -86937436 - L2 LINE L2 -488 2826 2689 458 306 136 34 chr10 53379497 53379732 -86937033 - MIR SINE MIR 0 262 4 398 271 64 27 chr10 53380405 53380440 -86936325 + L1MC4 LINE L1 7370 7402 -640 4006 225 74 81 chr10 53380440 53382207 -86934558 - MER52A LTR ERV1 0 1755 1 398 271 64 27 chr10 53382207 53382359 -86934406 + L1MC4 LINE L1 7402 7564 -478 1917 270 58 35 chr10 53382371 53383027 -86933738 + L1MA4 LINE L1 32 702 -4626 5584 245 73 44 chr10 53383069 53383457 -86933308 + L1MA4 LINE L1 782 1157 -5171 1611 185 26 20 chr10 53383457 53383759 -86933006 + AluJb SINE Alu 1 304 -8 5584 245 73 44 chr10 53383759 53385140 -86931625 + L1MA4 LINE L1 1157 2497 -3831 1722 191 0 7 chr10 53385140 53385449 -86931316 + AluJb SINE Alu 6 312 0 5584 245 73 44 chr10 53385449 53387148 -86929617 + L1MA4 LINE L1 2497 4371 -1957 1889 145 58 14 chr10 53387170 53387529 -86929236 - THE1C LTR MaLR 0 375 1 2949 193 77 14 chr10 53387529 53388453 -86928312 + L1MA4 LINE L1 4743 5724 -743 1711 180 41 0 chr10 53388453 53388792 -86927973 + L1MA4 LINE L1 6124 6482 0 494 258 34 68 chr10 53388798 53389093 -86927672 + L1MC4 LINE L1 7570 7854 -188 * 1063 256 131 14 chr10 53389088 53389821 -86926944 + L1M4 LINE L1 2752 3570 -2576 1484 187 42 17 chr10 53389834 53390187 -86926578 + L1MB8 LINE L1 5813 6174 -4 1524 189 18 4 chr10 53390266 53390547 -86926218 + AluJb SINE Alu 12 296 -16 341 220 88 50 chr10 53390564 53390723 -86926042 + L1M4 LINE L1 3846 4010 -2136 544 329 64 0 chr10 53391270 53391489 -86925276 - MIR SINE MIR 0 262 30 1744 139 3 82 chr10 53393557 53393873 -86922892 - MER4A LTR ERV1 -2 662 372 474 112 122 10 chr10 53393896 53393994 -86922771 - MER4A LTR ERV1 -555 109 1 544 301 40 12 chr10 53394053 53394226 -86922539 + MIR SINE MIR 5 182 -80 1688 168 10 3 chr10 53394455 53394747 -86922018 + AluJb SINE Alu 15 308 -4 486 299 99 24 chr10 53394813 53395024 -86921741 + MIR SINE MIR 31 257 -5 21 0 0 0 chr10 53395103 53395124 -86921641 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 53395235 53395256 -86921509 + AT_rich Low_complexity Low_complexity 1 21 0 195 236 73 0 chr10 53396211 53396266 -86920499 - MIR SINE MIR -21 241 183 425 119 0 0 chr10 53396304 53396363 -86920402 + MST-int LTR MaLR 900 958 -693 2377 120 92 3 chr10 53396365 53396756 -86920009 + MSTA LTR MaLR 3 428 0 194 191 21 0 chr10 53396816 53396863 -86919902 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 348 300 0 0 chr10 53396864 53396954 -86919811 - L1MC4 LINE L1 -1339 6703 6614 * 357 300 0 0 chr10 53396876 53396966 -86919799 + L1MC4 LINE L1 6614 6703 -1339 303 175 0 0 chr10 53396969 53397026 -86919739 + (TA)n Simple_repeat Simple_repeat 1 57 0 2182 115 0 0 chr10 53397396 53397684 -86919081 + AluSc SINE Alu 1 288 -21 312 143 0 0 chr10 53398336 53398392 -86918373 + (CA)n Simple_repeat Simple_repeat 1 56 0 245 336 58 29 chr10 53398688 53398825 -86917940 + L2 LINE L2 3169 3309 -4 1292 228 29 0 chr10 53399628 53399904 -86916861 + AluJo SINE Alu 1 284 -28 321 26 0 0 chr10 53399904 53399942 -86916823 + (CA)n Simple_repeat Simple_repeat 2 39 0 9059 51 0 0 chr10 53400151 53402058 -86914707 - L1PA5 LINE L1 0 6154 4249 2301 255 85 5 chr10 53402062 53402665 -86914100 - MER82 DNA MER2_type -1 652 2 193 257 92 55 chr10 53402810 53402919 -86913846 - MIR SINE MIR -32 230 118 200 317 0 0 chr10 53403040 53403100 -86913665 + (CA)n Simple_repeat Simple_repeat 1 60 0 2175 134 14 25 chr10 53404381 53404747 -86912018 - THE1B LTR MaLR -2 362 1 2797 13 0 0 chr10 53406698 53407009 -86909756 - AluYa5 SINE Alu 0 311 1 324 228 13 16 chr10 53407053 53407144 -86909621 + MLT1J2 LTR MaLR 43 137 -310 535 267 113 71 chr10 53407423 53407848 -86908917 + MLT1J1 LTR MaLR 2 416 0 2203 113 0 16 chr10 53407920 53408229 -86908536 + AluSx SINE Alu 1 304 -8 2118 96 7 30 chr10 53408255 53408556 -86908209 + AluSp SINE Alu 1 294 -19 1480 183 3 71 chr10 53409315 53409637 -86907128 - AluJo SINE Alu -10 302 3 1242 227 84 23 chr10 53410012 53410355 -86906410 + MLT1A2 LTR MaLR 5 368 -6 21 57 0 0 chr10 53410638 53410673 -86906092 + AT_rich Low_complexity Low_complexity 1 35 0 2000 167 6 41 chr10 53410858 53411174 -86905591 + MLT1A1 LTR MaLR 11 337 -28 1879 164 113 18 chr10 53411174 53411565 -86905200 + MSTA LTR MaLR 1 428 0 8629 151 25 42 chr10 53411567 53413172 -86903593 + MSTA-int LTR MaLR 3 1580 0 1545 191 140 13 chr10 53413173 53413551 -86903214 + MSTA LTR MaLR 2 427 -1 2000 167 6 41 chr10 53413551 53413595 -86903170 + MLT1A1 LTR MaLR 337 363 -2 1303 160 38 11 chr10 53414086 53414348 -86902417 + L1MA6 LINE L1 6032 6300 0 421 212 24 0 chr10 53414461 53414546 -86902219 - MIR SINE MIR -65 197 111 425 203 27 16 chr10 53415635 53415781 -86900984 - MER20 DNA MER1_type -4 215 26 501 302 52 27 chr10 53415968 53416204 -86900561 + L1ME LINE L1 541 780 -5303 323 263 119 33 chr10 53416274 53416517 -86900248 + L1ME LINE L1 797 1060 -5023 237 108 0 0 chr10 53416655 53416692 -86900073 + (CA)n Simple_repeat Simple_repeat 2 38 0 1195 252 84 52 chr10 53417446 53417761 -86899004 + L1MC4 LINE L1 6449 6785 -1257 2121 13 0 0 chr10 53417761 53417998 -86898767 - AluYa5 SINE Alu -1 310 74 1195 252 84 52 chr10 53417998 53418146 -86898619 + L1MC4 LINE L1 6785 6927 -1115 227 230 40 14 chr10 53418705 53418779 -86897986 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 33 56 0 0 chr10 53418890 53418944 -86897821 + AT_rich Low_complexity Low_complexity 1 54 0 306 363 55 17 chr10 53419541 53419778 -86896987 - L3 LINE CR1 -2 1575 1330 22 94 0 0 chr10 53420595 53420659 -86896106 + AT_rich Low_complexity Low_complexity 1 64 0 202 351 0 14 chr10 53420712 53420786 -86895979 + MIR SINE MIR 45 116 -97 42 36 0 0 chr10 53420906 53420962 -86895803 + AT_rich Low_complexity Low_complexity 1 56 0 322 325 32 8 chr10 53421051 53421174 -86895591 - L3 LINE CR1 -852 725 600 188 342 105 0 chr10 53421338 53421414 -86895351 + L2 LINE L2 3189 3272 0 2269 112 3 0 chr10 53422168 53422473 -86894292 + AluSx SINE Alu 1 306 -6 1267 269 111 14 chr10 53422740 53423182 -86893583 + MLT1E2 LTR MaLR 142 626 0 226 200 0 0 chr10 53424197 53424237 -86892528 - LTR16A LTR ERVL -9 441 402 21 0 0 0 chr10 53424473 53424494 -86892271 + AT_rich Low_complexity Low_complexity 1 21 0 378 300 110 73 chr10 53425647 53425974 -86890791 - L2 LINE L2 -76 3237 2899 1389 195 55 14 chr10 53426519 53426917 -86889848 + L1 LINE L1 4406 4811 -1335 5415 152 24 12 chr10 53427289 53428514 -86888251 + L1PA16 LINE L1 4937 6163 -3 21 89 0 0 chr10 53428881 53428937 -86887828 + AT_rich Low_complexity Low_complexity 1 56 0 2788 168 54 87 chr10 53429289 53430017 -86886748 - MER44D DNA MER2_type -1 704 1 2922 116 14 5 chr10 53430241 53430662 -86886103 + LTR9B LTR ERV1 1 425 -219 5452 170 29 5 chr10 53430662 53432270 -86884495 + L1PB2 LINE L1 660 1966 -4897 352 106 0 0 chr10 53432271 53432318 -86884447 + L1PB2 LINE L1 2232 2278 -4585 1562 88 69 5 chr10 53432328 53432545 -86884220 - AluSx SINE Alu -49 263 33 281 154 0 19 chr10 53432545 53432586 -86884179 - L1PBa LINE L1 -4590 2273 2232 13558 203 29 5 chr10 53432618 53437004 -86879761 + L1PB2 LINE L1 2280 6861 -6 388 211 0 0 chr10 53437004 53437080 -86879685 + Tigger2 DNA MER2_type 2393 2468 -250 815 198 39 56 chr10 53437091 53437323 -86879442 - L1MB7 LINE L1 -57 6127 5900 2432 71 0 0 chr10 53437819 53438129 -86878636 - AluY SINE Alu -1 310 1 22 35 0 0 chr10 53438771 53438800 -86877965 + AT_rich Low_complexity Low_complexity 1 29 0 247 294 87 22 chr10 53438921 53439013 -86877752 - L2 LINE L2 -20 3252 3155 23 0 0 0 chr10 53439121 53439144 -86877621 + AT_rich Low_complexity Low_complexity 1 23 0 441 189 32 0 chr10 53439145 53439240 -86877525 - MLT1D LTR MaLR -26 479 382 692 204 89 6 chr10 53439472 53439668 -86877097 - MLT1D LTR MaLR -350 155 1 233 337 59 10 chr10 53439737 53439838 -86876927 + L2 LINE L2 3158 3263 -9 261 278 113 61 chr10 53440447 53440562 -86876203 - MER94 DNA DNA 0 134 14 22 35 0 0 chr10 53440941 53440970 -86875795 + AT_rich Low_complexity Low_complexity 1 29 0 273 298 78 35 chr10 53441040 53441181 -86875584 + MIR SINE MIR 57 203 -59 273 333 17 26 chr10 53443552 53443669 -86873096 - MER5B DNA MER1_type -53 125 10 235 293 20 30 chr10 53443677 53443776 -86872989 + GA-rich Low_complexity Low_complexity 2 99 0 356 301 65 13 chr10 53444025 53444178 -86872587 - MER5A DNA MER1_type 0 189 29 223 330 64 35 chr10 53444251 53444424 -86872341 - L2 LINE L2 -10 3303 3126 218 291 22 75 chr10 53444411 53444545 -86872220 - MIR SINE MIR -2 260 134 * 38 0 0 0 chr10 53445200 53445238 -86871527 + AT_rich Low_complexity Low_complexity 1 38 0 416 353 174 5 chr10 53446097 53446321 -86870444 - MIR SINE MIR 0 262 1 460 229 71 24 chr10 53446821 53446991 -86869774 - MER96B DNA MER1_type? -237 180 3 24 77 0 0 chr10 53448975 53449027 -86867738 + AT_rich Low_complexity Low_complexity 1 52 0 30 45 0 0 chr10 53450265 53450309 -86866456 + AT_rich Low_complexity Low_complexity 1 44 0 183 323 90 68 chr10 53451245 53451378 -86865387 - L2 LINE L2 0 3272 3137 2112 147 96 10 chr10 53451567 53451961 -86864804 + MSTA LTR MaLR 1 428 0 6006 179 41 2 chr10 53451961 53453039 -86863726 + MSTA-int LTR MaLR 1 1120 -531 204 227 147 0 chr10 53453908 53453983 -86862782 - MIR SINE MIR 0 262 177 898 164 24 6 chr10 53454234 53454399 -86862366 + L1PA14 LINE L1 5991 6158 -3 1142 191 30 67 chr10 53455289 53455481 -86861284 - L1MA9 LINE L1 -31 6281 6104 18302 113 17 7 chr10 53455481 53458159 -86858606 - Charlie3 DNA MER1_type -4 2706 1 1142 191 30 67 chr10 53458159 53458295 -86858470 - L1MA9 LINE L1 -208 6104 5965 621 219 20 20 chr10 53458296 53458442 -86858323 - AluJo SINE Alu -166 146 1 3459 204 19 6 chr10 53458443 53459575 -86857190 - L1MA9 LINE L1 -528 5784 4642 1229 171 19 0 chr10 53459582 53459748 -86857017 - AluJb SINE Alu -12 300 128 369 0 0 0 chr10 53459748 53459789 -86856976 + (TG)n Simple_repeat Simple_repeat 2 42 0 1229 171 19 0 chr10 53459789 53459833 -86856932 - AluJb SINE Alu -184 128 86 284 140 18 0 chr10 53459846 53459903 -86856862 - L1MA9 LINE L1 -1511 4635 4578 2285 92 24 0 chr10 53460622 53460914 -86855851 + AluSq SINE Alu 3 301 -12 540 196 62 45 chr10 53461368 53461547 -86855218 - MER53 DNA DNA -6 183 2 283 326 186 0 chr10 53461549 53461678 -86855087 + MER5A DNA MER1_type 36 188 -1 246 302 86 54 chr10 53461988 53462209 -86854556 - MIR SINE MIR 0 262 34 3450 99 52 17 chr10 53463146 53463261 -86853504 - MER41A LTR ERV1 0 554 445 2181 42 39 52 chr10 53463261 53463569 -86853196 + AluY SINE Alu 1 304 -7 3450 99 52 17 chr10 53463569 53463988 -86852777 - MER41A LTR ERV1 -109 445 1 462 189 57 0 chr10 53464328 53464434 -86852331 - MER94 DNA DNA -10 124 13 315 245 20 20 chr10 53464772 53464870 -86851895 + T-rich Low_complexity Low_complexity 2 99 0 2705 147 63 56 chr10 53464877 53465481 -86851284 + MER4B LTR ERV1 3 610 0 377 331 35 0 chr10 53466020 53466162 -86850603 + L2 LINE L2 3167 3313 0 482 304 111 32 chr10 53466726 53467042 -86849723 - MLT1J LTR MaLR -143 368 28 237 312 106 48 chr10 53470296 53470485 -86846280 - MIR SINE MIR -19 243 44 244 330 78 39 chr10 53470537 53470640 -86846125 + MER91A DNA MER1_type 65 171 -25 304 282 30 46 chr10 53470994 53471125 -86845640 + HAL1 LINE L1 109 237 -2270 261 321 73 50 chr10 53471437 53471655 -86845110 + HAL1 LINE L1 640 862 -1645 716 231 52 55 chr10 53472306 53472596 -86844169 - L1ME2 LINE L1 -10 6154 5866 1806 164 13 3 chr10 53472606 53472904 -86843861 + AluJb SINE Alu 1 301 -11 332 216 10 0 chr10 53472904 53473001 -86843764 + (TA)n Simple_repeat Simple_repeat 1 98 0 2089 279 50 13 chr10 53473001 53474105 -86842660 - L1ME2 LINE L1 -736 5428 4292 500 226 24 40 chr10 53474108 53474232 -86842533 + LTR40c LTR ERVL 3 124 -341 * 763 154 15 7 chr10 53474231 53474367 -86842398 + LTR40a LTR ERVL 380 516 -3 306 238 0 12 chr10 53474376 53474456 -86842309 - L1ME2 LINE L1 -1857 4289 4211 268 105 0 0 chr10 53474533 53474571 -86842194 + L1M2 LINE L1 5491 5528 -772 916 278 52 5 chr10 53474571 53474977 -86841788 - L1ME2 LINE L1 -1938 4208 3784 49 32 0 0 chr10 53477167 53477230 -86839535 + AT_rich Low_complexity Low_complexity 1 63 0 272 320 93 27 chr10 53477435 53477585 -86839180 - MIR SINE MIR -19 243 84 244 274 0 0 chr10 53478250 53478312 -86838453 + GA-rich Low_complexity Low_complexity 1 62 0 400 263 49 88 chr10 53478466 53478671 -86838094 + MIR SINE MIR 47 243 -19 220 118 73 15 chr10 53480099 53480167 -86836598 + (TA)n Simple_repeat Simple_repeat 2 73 0 189 0 0 0 chr10 53481397 53481418 -86835347 + (A)n Simple_repeat Simple_repeat 1 21 0 186 240 0 0 chr10 53482267 53482317 -86834448 + (CATATA)n Simple_repeat Simple_repeat 1 50 0 216 0 0 0 chr10 53483217 53483241 -86833524 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 462 244 68 6 chr10 53483986 53484162 -86832603 + HsTC2 DNA Tc2 1633 1819 -79 1859 83 0 4 chr10 53484207 53484460 -86832305 - L1PA8 LINE L1 -5 6167 5916 243 0 0 0 chr10 53485004 53485031 -86831734 + (T)n Simple_repeat Simple_repeat 1 27 0 408 88 0 0 chr10 53485727 53485784 -86830981 + (CA)n Simple_repeat Simple_repeat 2 58 0 186 133 0 0 chr10 53486969 53486999 -86829766 + (TCTCCC)n Simple_repeat Simple_repeat 6 35 0 288 0 0 0 chr10 53487006 53487038 -86829727 + (TCC)n Simple_repeat Simple_repeat 3 34 0 234 91 0 0 chr10 53487281 53487314 -86829451 + (T)n Simple_repeat Simple_repeat 1 33 0 762 167 226 0 chr10 53487957 53488125 -86828640 + MER6B DNA MER2_type 4 209 -1 2028 99 7 7 chr10 53489144 53489428 -86827337 - AluSc SINE Alu -10 299 16 29 0 0 0 chr10 53490089 53490118 -86826647 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 53490366 53490395 -86826370 + AT_rich Low_complexity Low_complexity 1 29 0 623 152 9 0 chr10 53491076 53491181 -86825584 + Charlie5 DNA MER1_type 4 109 -2503 652 209 78 30 chr10 53491199 53491467 -86825298 + Charlie5 DNA MER1_type 2253 2533 -79 22 0 0 0 chr10 53491918 53491940 -86824825 + AT_rich Low_complexity Low_complexity 1 22 0 3591 198 24 22 chr10 53492031 53492855 -86823910 + LTR1B LTR ERV1 1 826 0 202 368 59 37 chr10 53492980 53493116 -86823649 - L2 LINE L2 -9 3263 3125 36 23 0 0 chr10 53494527 53494570 -86822195 + AT_rich Low_complexity Low_complexity 1 43 0 3349 114 12 21 chr10 53494775 53495291 -86821474 - MER9 LTR ERVK 0 511 1 2343 57 0 0 chr10 53495291 53495573 -86821192 - HERVK9 LTR ERVK 0 5916 5635 14883 80 3 1 chr10 53495669 53497589 -86819176 - HERVK9 LTR ERVK -282 5634 3711 12324 58 5 0 chr10 53497589 53499101 -86817664 - HERVK9 LTR ERVK -3130 2786 1268 3904 51 6 0 chr10 53499101 53499573 -86817192 - HERVK9 LTR ERVK -5324 592 118 7638 19 2 2 chr10 53499591 53500981 -86815784 - L1PA4 LINE L1 -3 6152 4764 3899 32 0 0 chr10 53500981 53501447 -86815318 + L1P LINE L1 4125 4590 -1556 805 113 8 16 chr10 53501447 53501571 -86815194 - HERVK9 LTR ERVK -5793 123 1 3516 115 0 8 chr10 53501571 53502086 -86814679 - MER9 LTR ERVK 0 511 1 1006 221 279 43 chr10 53502222 53502660 -86814105 + MLT1E1 LTR MaLR 1 541 -113 201 264 47 94 chr10 53502763 53502869 -86813896 + MIR SINE MIR 71 171 -91 301 344 114 35 chr10 53503078 53503596 -86813169 + L1MCc LINE L1 24 582 -5841 252 324 88 59 chr10 53503750 53503920 -86812845 + L1MCc LINE L1 824 998 -5425 1537 63 0 0 chr10 53504050 53504239 -86812526 - AluY SINE Alu 0 311 123 591 225 0 0 chr10 53504239 53504377 -86812388 + (TA)n Simple_repeat Simple_repeat 2 139 0 801 75 112 0 chr10 53504378 53504485 -86812280 - AluY SINE Alu -192 119 1 1315 210 163 22 chr10 53504517 53504921 -86811844 + MER65C LTR ERV1 1 461 0 2123 119 0 0 chr10 53506049 53506372 -86810393 - AluSg SINE Alu 0 310 1 612 245 94 0 chr10 53507468 53507660 -86809105 + L1MD1 LINE L1 4399 4608 -1538 694 249 20 15 chr10 53507664 53507861 -86808904 - L1MD1 LINE L1 -1212 4934 4737 3808 205 60 37 chr10 53507864 53509125 -86807640 + L1MD1 LINE L1 4941 6236 -6 2187 112 3 7 chr10 53509492 53509838 -86806927 - AluSg SINE Alu 0 310 1 351 45 0 0 chr10 53510884 53510928 -86805837 - AluYb8 SINE Alu -137 171 128 1267 221 0 8 chr10 53510944 53511198 -86805567 - AluJb SINE Alu -46 266 15 723 233 159 51 chr10 53511199 53511495 -86805270 - MER57A LTR ERV1 -17 386 59 2022 110 3 21 chr10 53512160 53512451 -86804314 + AluSg SINE Alu 1 286 -24 231 325 111 8 chr10 53512652 53512778 -86803987 - MIR SINE MIR -71 191 53 21 36 0 0 chr10 53513192 53513220 -86803545 + AT_rich Low_complexity Low_complexity 1 28 0 1745 98 8 0 chr10 53513220 53513475 -86803290 + L1PA10 LINE L1 5910 6166 -2 2114 121 7 3 chr10 53513735 53514033 -86802732 + AluSq SINE Alu 1 299 -14 207 0 0 0 chr10 53514310 53514333 -86802432 + (A)n Simple_repeat Simple_repeat 1 23 0 4331 184 29 27 chr10 53514575 53514914 -86801851 + L1PB4 LINE L1 4705 5042 -1114 2109 130 0 0 chr10 53514914 53515214 -86801551 + AluSx SINE Alu 3 302 -10 4331 184 29 27 chr10 53515214 53515980 -86800785 + L1PB4 LINE L1 5042 5822 -334 2471 62 3 3 chr10 53515980 53516289 -86800476 + AluY SINE Alu 1 309 -2 4331 184 29 27 chr10 53516289 53516625 -86800140 + L1PB4 LINE L1 5822 6156 0 231 260 0 0 chr10 53516809 53516859 -86799906 + (TG)n Simple_repeat Simple_repeat 1 50 0 1294 159 5 9 chr10 53516898 53517118 -86799647 - MLT2D LTR ERVL -195 219 1 315 0 0 0 chr10 53517125 53517160 -86799605 + (TG)n Simple_repeat Simple_repeat 2 36 0 444 330 75 5 chr10 53517751 53517939 -86798826 - LTR16C LTR ERVL -32 459 259 638 327 56 46 chr10 53518328 53518830 -86797935 - HERVL LTR ERVL -779 4875 4369 3501 55 0 13 chr10 53519064 53519518 -86797247 - LTR7 LTR ERV1 -2 448 1 275 144 11 178 chr10 53519547 53519637 -86797128 + MLT1H LTR MaLR 472 624 0 39 22 0 0 chr10 53520014 53520060 -86796705 + AT_rich Low_complexity Low_complexity 1 46 0 4311 85 13 0 chr10 53520062 53520664 -86796101 - L1MA1 LINE L1 -8 6294 5685 3612 57 11 0 chr10 53520666 53521125 -86795640 + L1PA5 LINE L1 5690 6153 -1 2878 148 9 10 chr10 53521117 53521911 -86794854 - L1MA1 LINE L1 -602 5700 4909 * 184 330 97 82 chr10 53522022 53522177 -86794588 - MIR SINE MIR -1 261 101 1720 173 3 29 chr10 53522177 53522484 -86794281 + AluJo SINE Alu 1 299 -13 184 330 97 82 chr10 53522484 53522534 -86794231 - MIR SINE MIR -161 101 53 515 111 12 0 chr10 53522995 53523076 -86793689 + AluS SINE Alu 1 82 -230 281 285 34 2 chr10 53524576 53524679 -86792086 + MIR SINE MIR 50 154 -64 1291 239 142 22 chr10 53525608 53526052 -86790713 + MLT1D LTR MaLR 1 497 -8 372 277 17 0 chr10 53526053 53526172 -86790593 + MLT1D-int LTR MaLR 5 125 -1246 201 218 0 36 chr10 53526176 53526231 -86790534 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 278 208 19 0 chr10 53526386 53526439 -86790326 + Tigger5 DNA MER2_type 2 55 -2268 * 395 192 0 0 chr10 53526408 53526481 -86790284 + Tigger5 DNA MER2_type 2251 2323 0 283 203 78 0 chr10 53526481 53526545 -86790220 + Tigger5 DNA MER2_type 2254 2322 -1 246 340 82 36 chr10 53526572 53526766 -86789999 - MIR SINE MIR -58 204 2 1921 164 113 15 chr10 53527425 53527893 -86788872 - MER34 LTR ERV1 -2 540 27 300 70 0 0 chr10 53528745 53528788 -86787977 + (TG)n Simple_repeat Simple_repeat 2 44 0 181 299 92 76 chr10 53528878 53529062 -86787703 + MIR3 SINE MIR 17 203 -5 34419 96 16 9 chr10 53530379 53536482 -86780283 + L1PA6 LINE L1 16 6154 0 229 400 16 0 chr10 53537409 53537534 -86779231 - L2 LINE L2 -256 3016 2890 246 330 113 30 chr10 53537838 53538068 -86778697 - L2 LINE L2 -804 2510 2262 311 308 0 0 chr10 53538080 53538171 -86778594 + MER91A DNA MER1_type 59 149 -47 223 337 40 46 chr10 53538389 53538564 -86778201 + MIR SINE MIR 89 262 0 1488 209 188 5 chr10 53538736 53539134 -86777631 + MLT1D LTR MaLR 1 471 -34 2431 66 0 34 chr10 53539620 53539940 -86776825 + AluY SINE Alu 1 309 -2 186 43 0 0 chr10 53539955 53539978 -86776787 + (GA)n Simple_repeat Simple_repeat 2 24 0 2577 218 56 39 chr10 53540110 53540784 -86775981 - MER76 LTR ERV -2 686 1 333 0 0 0 chr10 53541132 53541169 -86775596 + (TA)n Simple_repeat Simple_repeat 2 38 0 414 0 0 0 chr10 53541405 53541451 -86775314 + (TA)n Simple_repeat Simple_repeat 1 46 0 1258 68 19 0 chr10 53541730 53541892 -86774873 - AluY SINE Alu -12 299 135 493 125 0 0 chr10 53542044 53542116 -86774649 - AluS SINE Alu -239 72 1 422 32 11 95 chr10 53542145 53542240 -86774525 + AluY SINE Alu 2 88 -230 215 215 28 19 chr10 53542466 53542573 -86774192 + CT-rich Low_complexity Low_complexity 1 108 0 489 302 14 34 chr10 53542587 53543256 -86773509 + CT-rich Low_complexity Low_complexity 1 656 0 195 42 0 0 chr10 53546189 53546213 -86770552 + (A)n Simple_repeat Simple_repeat 1 24 0 282 56 0 0 chr10 53548770 53548806 -86767959 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 11907 80 7 20 chr10 53549301 53551129 -86765636 - HERVH LTR ERV1 -4866 2847 1044 248 256 36 15 chr10 53551187 53551324 -86765441 + (CCGCT)n Simple_repeat Simple_repeat 4 143 0 233 306 34 34 chr10 53551279 53551426 -86765339 + SUBTEL_sa Satellite Satellite 24 170 -4 * 1041 282 48 27 chr10 53552410 53552822 -86763943 + MER77 LTR ERV1 179 599 -6 359 315 0 14 chr10 53554018 53554161 -86762604 + GA-rich Low_complexity Low_complexity 3 143 0 1437 219 45 33 chr10 53554779 53555176 -86761589 + MER67D LTR ERV1 1 402 -112 25 51 0 0 chr10 53555546 53555585 -86761180 + AT_rich Low_complexity Low_complexity 1 39 0 2293 97 23 0 chr10 53555592 53555892 -86760873 + AluSc SINE Alu 1 307 -2 385 298 62 28 chr10 53556484 53556662 -86760103 + MIR SINE MIR 61 244 -18 * 454 336 121 27 chr10 53556661 53557101 -86759664 - L3 LINE CR1 -195 1382 902 72 47 0 0 chr10 53557442 53557549 -86759216 + AT_rich Low_complexity Low_complexity 1 107 0 22 35 0 0 chr10 53557602 53557631 -86759134 + AT_rich Low_complexity Low_complexity 1 29 0 32 26 0 0 chr10 53557715 53557754 -86759011 + AT_rich Low_complexity Low_complexity 1 39 0 340 357 25 19 chr10 53558035 53558192 -86758573 + MIR SINE MIR 30 187 -75 229 326 58 58 chr10 53558684 53558856 -86757909 - MIR SINE MIR -25 237 66 2013 105 0 18 chr10 53559328 53559613 -86757152 - AluSq SINE Alu -1 312 33 252 59 88 0 chr10 53560318 53560386 -86756379 + (TA)n Simple_repeat Simple_repeat 1 74 0 874 193 100 135 chr10 53561234 53561716 -86755049 + MER4C LTR ERV1 1 465 0 27 29 0 0 chr10 53562004 53562038 -86754727 + AT_rich Low_complexity Low_complexity 1 34 0 637 283 5 42 chr10 53563435 53563626 -86753139 - MER5A DNA MER1_type -1 188 5 215 264 33 77 chr10 53563626 53563717 -86753048 - MIR SINE MIR -74 188 102 299 285 89 23 chr10 53565440 53565654 -86751111 + L1M4 LINE L1 33 260 -6282 239 284 27 0 chr10 53566015 53566089 -86750676 + L1M4 LINE L1 613 688 -5854 417 196 9 0 chr10 53566104 53566216 -86750549 - L1M4 LINE L1 -1079 5067 4955 1720 149 158 104 chr10 53567477 53568035 -86748730 - LTR4 LTR ERV1 0 588 1 2322 108 3 0 chr10 53569142 53569447 -86747318 + AluSx SINE Alu 1 306 -6 23 33 0 0 chr10 53570332 53570362 -86746403 + AT_rich Low_complexity Low_complexity 1 30 0 2053 107 0 0 chr10 53571446 53571717 -86745048 + AluSc SINE Alu 31 301 -8 830 184 19 29 chr10 53572263 53572469 -86744296 - MER3 DNA MER1_type 0 209 6 240 254 52 30 chr10 53572668 53572802 -86743963 + L1MA10 LINE L1 6195 6331 -3 2239 92 7 3 chr10 53572993 53573287 -86743478 + AluSp SINE Alu 2 296 -17 780 255 188 9 chr10 53573367 53573914 -86742851 + L1ME3A LINE L1 5477 6122 -48 241 275 29 14 chr10 53574202 53574271 -86742494 - MIR SINE MIR -119 89 20 4677 254 42 26 chr10 53574814 53577073 -86739692 + L1PBa LINE L1 186 1643 -5220 3888 178 22 6 chr10 53577342 53578033 -86738732 - MER44D DNA MER2_type -1 704 3 207 0 0 0 chr10 53578906 53578929 -86737836 + (TC)n Simple_repeat Simple_repeat 1 23 0 275 241 90 83 chr10 53579336 53579481 -86737284 - MIR SINE MIR -43 219 74 742 333 22 25 chr10 53579632 53579908 -86736857 + MLT2E LTR ERVL 28 302 -326 742 203 33 0 chr10 53579981 53580134 -86736631 + MLT2E LTR ERVL 471 628 0 58 54 0 0 chr10 53580305 53580398 -86736367 + AT_rich Low_complexity Low_complexity 1 93 0 222 232 24 24 chr10 53580871 53580953 -86735812 + (TA)n Simple_repeat Simple_repeat 1 82 0 238 139 56 83 chr10 53581245 53581317 -86735448 + MER103 DNA DNA 93 162 -4 393 22 0 0 chr10 53581988 53582034 -86734731 + (TG)n Simple_repeat Simple_repeat 1 46 0 23 0 0 0 chr10 53582275 53582298 -86734467 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr10 53583921 53583955 -86732810 + AT_rich Low_complexity Low_complexity 1 34 0 587 289 93 10 chr10 53584158 53584362 -86732403 - MIR SINE MIR -21 241 21 548 271 0 20 chr10 53584596 53584747 -86732018 - MIR SINE MIR -39 223 76 276 224 0 0 chr10 53584921 53584988 -86731777 + (TA)n Simple_repeat Simple_repeat 2 68 0 1170 207 0 11 chr10 53585216 53585477 -86731288 - L1 LINE L1 -2248 3898 3641 375 23 0 0 chr10 53585477 53585521 -86731244 + (CA)n Simple_repeat Simple_repeat 1 44 0 241 220 0 0 chr10 53585521 53585571 -86731194 + L1MC4 LINE L1 6653 6702 -1340 10691 230 30 39 chr10 53585573 53586595 -86730170 - L1P5 LINE L1 -371 6496 5466 2454 108 11 24 chr10 53586595 53586964 -86729801 + THE1B LTR MaLR 1 364 0 10691 230 30 39 chr10 53586964 53589272 -86727493 - L1P5 LINE L1 -1401 5466 3354 2138 147 0 27 chr10 53589272 53589647 -86727118 + L1PB1 LINE L1 5785 6149 -2 10691 230 30 39 chr10 53589647 53590768 -86725997 - L1P5 LINE L1 -3513 3354 2224 10654 133 129 18 chr10 53591049 53591060 -86725705 - L1P5 LINE L1 -4689 2174 2166 1704 112 23 0 chr10 53591060 53591318 -86725447 - L1PA8 LINE L1 -2 6170 5907 10654 133 129 18 chr10 53591318 53593262 -86723503 - L1P5 LINE L1 -4697 2166 3 28 29 0 0 chr10 53594625 53594660 -86722105 + AT_rich Low_complexity Low_complexity 1 35 0 211 125 25 0 chr10 53594766 53594806 -86721959 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1311 199 34 24 chr10 53594817 53594996 -86721769 - AluJb SINE Alu -10 302 117 247 24 0 48 chr10 53594996 53595038 -86721727 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1311 199 34 24 chr10 53595038 53595150 -86721615 - AluJb SINE Alu -195 117 8 22 35 0 0 chr10 53595592 53595621 -86721144 + AT_rich Low_complexity Low_complexity 1 29 0 2101 148 33 19 chr10 53595961 53596320 -86720445 - THE1B LTR MaLR 0 364 1 1677 186 42 0 chr10 53596606 53596891 -86719874 - AluJo SINE Alu -15 297 1 21 0 0 0 chr10 53597417 53597438 -86719327 + AT_rich Low_complexity Low_complexity 1 21 0 190 239 0 22 chr10 53597944 53597990 -86718775 + L2 LINE L2 2681 2725 -589 190 293 27 0 chr10 53599807 53599882 -86716883 - MIR SINE MIR 0 262 186 253 256 100 11 chr10 53599966 53600056 -86716709 + MER5A DNA MER1_type 86 183 -6 220 359 39 0 chr10 53600034 53600137 -86716628 - MIR SINE MIR -32 230 124 * 203 237 0 0 chr10 53602235 53602273 -86714492 + polypurine Low_complexity Low_complexity 2 39 0 3076 140 18 10 chr10 53602629 53603136 -86713629 + MER75 DNA T2_type 2 512 -2 615 182 35 6 chr10 53603543 53603713 -86713052 + GA-rich Low_complexity Low_complexity 2 176 0 225 93 93 0 chr10 53603999 53604042 -86712723 + L1MC4 LINE L1 6656 6702 -1340 974 160 27 37 chr10 53604680 53604868 -86711897 - AluSc SINE Alu -5 304 119 1308 136 45 0 chr10 53605277 53605497 -86711268 - MER30 DNA MER1_type 0 230 1 344 303 87 29 chr10 53605691 53605932 -86710833 + L1M4 LINE L1 4512 4766 -1380 21 36 0 0 chr10 53605968 53605996 -86710769 + AT_rich Low_complexity Low_complexity 1 28 0 2358 78 3 3 chr10 53607982 53608289 -86708476 + AluSx SINE Alu 1 307 -5 2179 156 89 26 chr10 53609134 53609595 -86707170 - LTR2B LTR ERV1 0 490 1 183 414 15 8 chr10 53609762 53609895 -86706870 + MIR SINE MIR 5 138 -124 453 286 160 0 chr10 53610583 53610758 -86706007 + MIR SINE MIR 47 249 -13 193 204 159 0 chr10 53610748 53610792 -86705973 - L2 LINE L2 -9 3304 3254 * 249 197 0 0 chr10 53611066 53611127 -86705638 + (TG)n Simple_repeat Simple_repeat 1 61 0 398 297 31 16 chr10 53611444 53611572 -86705193 - L2 LINE L2 -10 3303 3174 541 288 65 11 chr10 53613081 53613265 -86703500 - MIR SINE MIR -3 259 66 1078 228 35 8 chr10 53613380 53613635 -86703130 - MLT1B LTR MaLR -126 264 3 853 264 119 4 chr10 53613951 53614228 -86702537 + MLT1F LTR MaLR 179 487 -55 24 47 0 47 chr10 53614798 53614862 -86701903 + AT_rich Low_complexity Low_complexity 1 61 0 203 286 26 0 chr10 53614909 53614986 -86701779 + GA-rich Low_complexity Low_complexity 2 80 0 2558 45 7 0 chr10 53615078 53615387 -86701378 - AluY SINE Alu 0 311 1 217 296 34 45 chr10 53615804 53615892 -86700873 + L2 LINE L2 3186 3272 0 432 37 0 0 chr10 53615900 53615954 -86700811 + (TG)n Simple_repeat Simple_repeat 1 54 0 1830 202 6 6 chr10 53616436 53616783 -86699982 - MLT1A1 LTR MaLR -18 347 1 1687 142 225 0 chr10 53617006 53617352 -86699413 - MSTA LTR MaLR 0 428 5 8899 180 15 7 chr10 53617362 53618600 -86698165 - MSTA-int LTR MaLR 0 1651 397 2122 185 31 124 chr10 53618600 53619275 -86697490 - LTR9 LTR ERV1 0 612 1 8899 180 15 7 chr10 53619275 53619652 -86697113 - MSTA-int LTR MaLR -1254 397 24 1561 181 35 48 chr10 53619684 53620054 -86696711 - MSTA LTR MaLR -13 415 1 21 0 0 0 chr10 53620341 53620362 -86696403 + AT_rich Low_complexity Low_complexity 1 21 0 228 163 0 0 chr10 53621521 53621564 -86695201 + CT-rich Low_complexity Low_complexity 3 45 0 250 383 9 17 chr10 53621816 53621931 -86694834 - MIR SINE MIR -134 128 15 220 346 96 42 chr10 53622367 53622627 -86694138 + L3 LINE CR1 647 920 -657 237 65 0 0 chr10 53623350 53623381 -86693384 + (TC)n Simple_repeat Simple_repeat 2 32 0 28 0 0 0 chr10 53624086 53624114 -86692651 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr10 53624748 53624787 -86691978 + AT_rich Low_complexity Low_complexity 1 39 0 1870 113 91 4 chr10 53626755 53627029 -86689736 - AluSx SINE Alu -14 298 1 1168 219 55 65 chr10 53627820 53628253 -86688512 - L1ME1 LINE L1 -9 6157 5729 267 270 110 0 chr10 53628257 53628357 -86688408 - L1ME1 LINE L1 -481 5685 5575 470 216 11 0 chr10 53628358 53628446 -86688319 + 5S rRNA rRNA 1 89 -32 584 215 62 105 chr10 53628447 53628746 -86688019 - L1ME1 LINE L1 -574 5588 5298 2359 59 23 7 chr10 53628823 53629128 -86687637 + AluY SINE Alu 1 310 -1 435 216 113 42 chr10 53629140 53629353 -86687412 - L1ME1 LINE L1 -927 5219 4992 3169 219 79 57 chr10 53629454 53629930 -86686835 - L1MD2 LINE L1 -14 6345 5881 1925 134 7 7 chr10 53629930 53630221 -86686544 - AluSx SINE Alu -20 292 2 3169 219 79 57 chr10 53630221 53631974 -86684791 - L1MD2 LINE L1 -478 5881 3951 1976 158 0 0 chr10 53632630 53632921 -86683844 - AluSx SINE Alu -19 293 3 1287 278 34 37 chr10 53632938 53633528 -86683237 + L1M4 LINE L1 3362 3949 -2197 1669 229 89 47 chr10 53633642 53634259 -86682506 + LTR48B LTR ERV1 1 643 -1 33 56 0 0 chr10 53634810 53634864 -86681901 + AT_rich Low_complexity Low_complexity 1 54 0 29 0 0 0 chr10 53635580 53635609 -86681156 + AT_rich Low_complexity Low_complexity 1 29 0 3518 101 18 34 chr10 53635613 53636167 -86680598 + L1PA13 LINE L1 5608 6152 -11 225 256 0 24 chr10 53636374 53636456 -86680309 + L1M4 LINE L1 46 125 -6417 261 0 0 0 chr10 53636924 53636953 -86679812 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr10 53637058 53637087 -86679678 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 53637107 53637139 -86679626 + AT_rich Low_complexity Low_complexity 1 32 0 212 331 80 13 chr10 53638276 53638427 -86678338 - MIR SINE MIR -8 254 94 1541 206 3 16 chr10 53638429 53638735 -86678030 + AluJb SINE Alu 1 302 -10 198 0 0 0 chr10 53638828 53638850 -86677915 + (A)n Simple_repeat Simple_repeat 1 22 0 2822 19 0 0 chr10 53638924 53639234 -86677531 - AluYb8 SINE Alu -8 310 1 23 0 0 0 chr10 53639866 53639889 -86676876 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr10 53639942 53639974 -86676791 + (CA)n Simple_repeat Simple_repeat 1 32 0 180 77 0 0 chr10 53639974 53640000 -86676765 + (GA)n Simple_repeat Simple_repeat 1 26 0 732 259 39 21 chr10 53640246 53640528 -86676237 - L1M4 LINE L1 -1594 5347 5061 877 250 83 31 chr10 53640631 53641283 -86675482 - L1MEc LINE L1 -3712 3229 2575 756 261 72 5 chr10 53641287 53641494 -86675271 + MER58A DNA MER1_type 2 222 -2 828 283 94 60 chr10 53641498 53641925 -86674840 - L1MEc LINE L1 -4541 2581 2123 2536 54 0 10 chr10 53641925 53642239 -86674526 - AluY SINE Alu 0 311 1 828 283 94 60 chr10 53642239 53642473 -86674292 - L1MEc LINE L1 -4999 2123 1898 215 224 0 40 chr10 53642531 53642607 -86674158 + T-rich Low_complexity Low_complexity 2 74 0 631 229 110 95 chr10 53642690 53643027 -86673738 - L1MEc LINE L1 -5049 1374 1033 1088 264 126 44 chr10 53643040 53644068 -86672697 + L1ME2 LINE L1 4926 6029 -135 1652 236 64 27 chr10 53644260 53644747 -86672018 + MLT1D LTR MaLR 1 505 0 344 322 50 0 chr10 53644908 53645029 -86671736 - MIR3 SINE MIR 0 208 82 224 229 29 14 chr10 53646041 53646111 -86670654 + (TA)n Simple_repeat Simple_repeat 1 71 0 228 143 0 0 chr10 53646132 53646174 -86670591 + (TG)n Simple_repeat Simple_repeat 1 42 0 2983 118 56 70 chr10 53646600 53647217 -86669548 - MER4B LTR ERV1 -2 777 1 1897 146 14 0 chr10 53647467 53647754 -86669011 + LTR58 LTR ERV1 1 291 -388 458 238 41 25 chr10 53647741 53647863 -86668902 + LTR58 LTR ERV1 441 564 -115 * 2510 82 0 3 chr10 53647932 53648272 -86668493 - L1PB1 LINE L1 -8 6143 5805 379 78 0 0 chr10 53648272 53648323 -86668442 - AluS SINE Alu -239 64 14 673 96 43 9 chr10 53648334 53648449 -86668316 - L1PB1 LINE L1 -350 5801 5683 631 155 0 43 chr10 53648454 53648570 -86668195 + LTR58 LTR ERV1 569 679 0 2372 98 3 0 chr10 53648793 53649099 -86667666 - AluSp SINE Alu -6 307 1 23 54 0 0 chr10 53649266 53649303 -86667462 + AT_rich Low_complexity Low_complexity 1 37 0 25 65 0 0 chr10 53650365 53650411 -86666354 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr10 53651207 53651235 -86665530 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr10 53651460 53651481 -86665284 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 371 352 106 10 chr10 53651481 53651680 -86665085 + MLT2E LTR ERVL 70 287 -341 1357 245 25 54 chr10 53652290 53652771 -86663994 + MLT1C LTR MaLR 1 467 0 454 210 22 72 chr10 53653437 53653575 -86663190 - MER57A LTR ERV1 0 403 273 791 102 0 0 chr10 53653594 53653702 -86663063 - MER57A LTR ERV1 -295 108 1 444 180 0 22 chr10 53653702 53653791 -86662974 - MER57A-int LTR ERV1 0 7537 7451 687 174 105 110 chr10 53653805 53654137 -86662628 - LTR54 LTR ERV1 -111 387 1 3687 103 0 6 chr10 53655324 53655838 -86660927 - MER9 LTR ERVK 0 511 1 2260 63 0 17 chr10 53655838 53656125 -86660640 - HERVK9 LTR ERVK 0 5916 5635 3501 117 0 0 chr10 53656292 53656803 -86659962 - THE1B-int LTR MaLR -1065 515 5 2193 139 19 25 chr10 53656807 53657173 -86659592 - THE1B LTR MaLR 0 364 1 2030 192 146 105 chr10 53657242 53658082 -86658683 - LTR28 LTR ERV1 0 1020 2 2206 169 14 35 chr10 53659510 53659937 -86656828 - MSTB1 LTR MaLR 0 432 15 508 171 0 76 chr10 53659954 53660025 -86656740 - Tigger7 DNA MER2_type -6 2485 2423 2696 164 87 18 chr10 53660025 53660580 -86656185 + LTR49 LTR ERV1 1 593 -2 508 171 0 76 chr10 53660580 53660613 -86656152 - Tigger7 DNA MER2_type -68 2423 2389 * 1350 235 11 0 chr10 53660608 53660872 -86655893 - Tigger7 DNA MER2_type -2220 267 1 30 69 0 0 chr10 53661246 53661304 -86655461 + AT_rich Low_complexity Low_complexity 1 58 0 2038 148 0 3 chr10 53661306 53661616 -86655149 + AluSq SINE Alu 3 311 -2 30 45 0 0 chr10 53661628 53661672 -86655093 + AT_rich Low_complexity Low_complexity 1 44 0 1988 184 16 100 chr10 53661798 53662359 -86654406 + MER67D LTR ERV1 1 514 0 331 329 24 70 chr10 53662380 53662593 -86654172 + MIR SINE MIR 2 204 -58 3433 51 2 7 chr10 53662916 53663366 -86653399 - LTR7 LTR ERV1 -2 448 1 2509 84 45 13 chr10 53663366 53663746 -86653019 - HERVH LTR ERV1 0 7713 7322 1335 122 23 14 chr10 53663744 53663965 -86652800 - HERVH LTR ERV1 -1894 5819 5597 * 989 197 0 0 chr10 53663962 53664140 -86652625 - HERVH LTR ERV1 -2564 5149 4972 * 41908 43 22 1 chr10 53664200 53670218 -86646547 - L1PA3 LINE L1 -4 6151 8 3109 133 33 2 chr10 53670223 53670706 -86646059 - HERVH LTR ERV1 -2728 4985 4488 6051 94 1 2 chr10 53670708 53671563 -86645202 - HERVH LTR ERV1 -3720 3993 3140 * 19717 94 25 13 chr10 53671542 53674459 -86642306 - HERVH LTR ERV1 -4718 2995 44 3460 53 2 7 chr10 53674472 53674922 -86641843 - LTR7 LTR ERV1 -2 448 1 429 296 128 6 chr10 53675015 53675187 -86641578 - MIR SINE MIR -13 249 57 567 270 185 11 chr10 53675395 53675665 -86641100 + L2 LINE L2 2190 2506 -808 461 314 80 69 chr10 53675684 53676116 -86640649 + L2 LINE L2 2780 3215 -98 258 299 24 0 chr10 53676146 53676311 -86640454 - L1MEc LINE L1 -3120 3095 2745 487 275 131 14 chr10 53676549 53676948 -86639817 - L1MEc LINE L1 -3757 2471 2035 22 70 0 0 chr10 53677155 53677198 -86639567 + AT_rich Low_complexity Low_complexity 1 43 0 849 114 14 7 chr10 53678567 53678707 -86638058 - LTR49 LTR ERV1 -454 141 1 5196 154 13 24 chr10 53678713 53679683 -86637082 - LTR49-int LTR ERV1 -1 6330 5371 2617 178 9 2 chr10 53679694 53680160 -86636605 - L1PB4 LINE L1 -3 6153 5685 2677 245 29 52 chr10 53680162 53681153 -86635612 + L1M4 LINE L1 2113 3081 -3065 536 88 0 16 chr10 53681155 53681394 -86635371 + AluSg SINE Alu 1 307 -2 1470 249 10 72 chr10 53681458 53681945 -86634820 + MLT2B1 LTR ERVL 5 461 -59 228 122 0 0 chr10 53681945 53681986 -86634779 + (CA)n Simple_repeat Simple_repeat 1 41 0 549 217 0 0 chr10 53682018 53682133 -86634632 + MLT1B-int LTR MaLR 1 115 -1256 1894 267 46 92 chr10 53682149 53683218 -86633547 + MLT1B-int LTR MaLR 338 1357 -14 851 232 64 103 chr10 53683237 53683388 -86633377 + MLT1B LTR MaLR 6 161 -229 1795 169 3 10 chr10 53683388 53683702 -86633063 - AluSx SINE Alu 0 312 1 851 232 64 103 chr10 53683702 53683938 -86632827 + MLT1B LTR MaLR 161 378 -12 1349 97 0 27 chr10 53684867 53685053 -86631712 + AluSg/x SINE Alu 101 281 -31 186 244 156 0 chr10 53685194 53685239 -86631526 + MIR SINE MIR 194 245 -17 2311 83 0 6 chr10 53685848 53686161 -86630604 + AluY SINE Alu 1 311 0 264 56 0 0 chr10 53686494 53686530 -86630235 - MADE1 DNA Mariner -44 36 1 1867 166 102 33 chr10 53686530 53686891 -86629874 + MER47B DNA MER2_type 32 417 -1 227 216 20 0 chr10 53687442 53687493 -86629272 - L2 LINE L2 -214 3058 3007 220 314 43 91 chr10 53687534 53687744 -86629021 - L2 LINE L2 -906 2408 2209 776 273 23 36 chr10 53687764 53687778 -86628987 - MER58A DNA MER1_type -2196 224 211 6947 48 31 3 chr10 53687778 53688648 -86628117 + MER11D LTR ERVK 1 894 -3 776 273 23 36 chr10 53688648 53688853 -86627912 - MER58A DNA MER1_type -2209 211 8 2285 82 0 3 chr10 53689107 53689399 -86627366 + AluY SINE Alu 4 294 -17 230 368 95 0 chr10 53690590 53690685 -86626080 - MER91A DNA MER1_type -36 160 57 27 0 0 0 chr10 53691715 53691742 -86625023 + AT_rich Low_complexity Low_complexity 1 27 0 42 36 0 0 chr10 53692515 53692571 -86624194 + AT_rich Low_complexity Low_complexity 1 56 0 2268 104 48 31 chr10 53692651 53693007 -86623758 + THE1B LTR MaLR 3 364 0 836 298 81 76 chr10 53693255 53693994 -86622771 + L1ME1 LINE L1 54 796 -5600 1081 222 6 112 chr10 53694018 53694365 -86622400 + MLT1A1 LTR MaLR 56 365 0 303 258 47 102 chr10 53694365 53694729 -86622036 + L1ME1 LINE L1 823 1166 -5230 3610 263 93 44 chr10 53695108 53696373 -86620392 + L1ME1 LINE L1 2910 4112 -2123 2530 49 0 0 chr10 53696373 53696678 -86620087 - AluY SINE Alu -6 305 1 3610 263 93 44 chr10 53696678 53697211 -86619554 + L1ME1 LINE L1 4112 4617 -1618 5373 69 24 12 chr10 53697211 53697968 -86618797 - MER4E LTR ERV1 0 766 1 3610 263 93 44 chr10 53697968 53698429 -86618336 + L1ME1 LINE L1 4617 5054 -1181 2243 114 0 7 chr10 53698429 53698737 -86618028 + AluSq SINE Alu 1 306 -7 3610 263 93 44 chr10 53698737 53699641 -86617124 + L1ME1 LINE L1 5054 6230 -5 26 0 0 0 chr10 53699811 53699837 -86616928 + AT_rich Low_complexity Low_complexity 1 26 0 634 281 67 6 chr10 53700534 53700712 -86616053 - MER58A DNA MER1_type -34 190 2 847 276 75 26 chr10 53700716 53701372 -86615393 + L1MEc LINE L1 1849 2505 -3710 8533 187 15 8 chr10 53701933 53702290 -86614475 - L1PB1 LINE L1 -2 6149 5796 554 71 12 0 chr10 53702290 53702374 -86614391 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 8533 187 15 8 chr10 53702374 53704823 -86611942 - L1PB1 LINE L1 -355 5796 3321 2206 155 5 30 chr10 53704827 53705195 -86611570 - THE1B LTR MaLR -5 359 1 9395 119 7 1 chr10 53705195 53706523 -86610242 - THE1B-int LTR MaLR 0 1580 245 22 106 0 0 chr10 53708597 53708682 -86608083 + AT_rich Low_complexity Low_complexity 1 85 0 2041 67 0 45 chr10 53709352 53709642 -86607123 + AluY SINE Alu 25 302 0 1859 169 7 10 chr10 53710038 53710346 -86606419 - AluJb SINE Alu 0 312 6 249 265 69 29 chr10 53710358 53710460 -86606305 - LTR16C LTR ERVL -23 468 363 309 318 146 46 chr10 53710869 53711020 -86605745 - L2 LINE L2 -1 3271 3106 2127 90 0 0 chr10 53711665 53711932 -86604833 + AluSx SINE Alu 1 267 -45 389 361 27 0 chr10 53712035 53712218 -86604547 + MIR SINE MIR 75 262 0 1821 154 7 16 chr10 53712385 53712691 -86604074 - AluJo SINE Alu 0 312 10 23 54 0 0 chr10 53714843 53714880 -86601885 + AT_rich Low_complexity Low_complexity 1 37 0 1856 154 27 12 chr10 53714896 53715234 -86601531 - MER47A DNA MER2_type -4 362 20 186 103 0 0 chr10 53715356 53715385 -86601380 + (GA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr10 53716260 53716282 -86600483 + AT_rich Low_complexity Low_complexity 1 22 0 213 209 0 0 chr10 53717071 53717138 -86599627 + (CA)n Simple_repeat Simple_repeat 2 68 0 298 305 103 29 chr10 53717140 53717314 -86599451 + MLT1L LTR MaLR 414 600 -15 21 57 0 0 chr10 53717519 53717554 -86599211 + AT_rich Low_complexity Low_complexity 1 35 0 581 353 38 75 chr10 53717899 53718562 -86598203 - L2 LINE L2 -585 2729 2092 4874 166 29 52 chr10 53719041 53720929 -86595836 - L1MA8 LINE L1 -6 6285 4448 3176 184 62 34 chr10 53721111 53721810 -86594955 - MER50 LTR ERV1 -16 718 1 4787 117 39 78 chr10 53722043 53722529 -86594236 + MER4D LTR ERV1 1 435 -468 2023 119 14 0 chr10 53722529 53722823 -86593942 + AluSx SINE Alu 1 298 -14 4787 117 39 78 chr10 53722823 53723275 -86593490 + MER4D LTR ERV1 435 903 0 352 333 37 0 chr10 53723387 53723522 -86593243 - MIR3 SINE MIR -9 199 60 191 185 0 19 chr10 53723646 53723700 -86593065 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 327 113 0 0 chr10 53724926 53724979 -86591786 + (GA)n Simple_repeat Simple_repeat 2 54 0 588 280 100 15 chr10 53725090 53725591 -86591174 + L1MEc LINE L1 1129 1841 -4887 1031 175 65 13 chr10 53725609 53725838 -86590927 - L1 LINE L1 -865 5281 5041 4826 191 16 8 chr10 53725840 53726808 -86589957 + L1MA6 LINE L1 5325 6300 0 357 325 18 0 chr10 53726875 53727038 -86589727 + L1MEc LINE L1 1789 1954 -4885 1429 309 66 82 chr10 53727043 53728331 -86588434 + L1MCc LINE L1 -257 1009 -4899 458 294 28 9 chr10 53728456 53728709 -86588056 + L1MCc LINE L1 1068 1433 -4983 547 290 144 8 chr10 53728720 53729082 -86587683 + L1MCc LINE L1 2393 2803 -3623 316 191 73 9 chr10 53729091 53729201 -86587564 + Charlie5 DNA MER1_type 2426 2542 -70 22 0 0 0 chr10 53730077 53730099 -86586666 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr10 53730609 53730635 -86586130 + (CA)n Simple_repeat Simple_repeat 2 27 0 878 251 72 11 chr10 53730657 53730936 -86585829 - L1ME3A LINE L1 -41 6129 5834 35 78 0 0 chr10 53730937 53731014 -86585751 + AT_rich Low_complexity Low_complexity 1 77 0 1329 246 27 16 chr10 53731014 53731380 -86585385 + MLT1A2 LTR MaLR 5 374 0 1107 244 97 73 chr10 53731425 53732192 -86584573 - L1ME3A LINE L1 -919 5227 4443 1323 234 31 59 chr10 53732943 53733622 -86583143 + L1M3 LINE L1 4812 5492 -706 1524 200 96 11 chr10 53733777 53734143 -86582622 + MLT1B LTR MaLR 1 390 0 21 36 0 0 chr10 53734597 53734625 -86582140 + AT_rich Low_complexity Low_complexity 1 28 0 2076 122 0 10 chr10 53734632 53734920 -86581845 + AluSx SINE Alu 1 285 -27 246 281 0 0 chr10 53736293 53736350 -86580415 + LTR40b LTR ERVL 1 57 -405 489 277 101 61 chr10 53736454 53736862 -86579903 + L1MEc LINE L1 2601 3024 -4098 485 316 45 14 chr10 53736875 53737166 -86579599 + L1MEc LINE L1 2980 3279 -3662 23 97 0 0 chr10 53737578 53737650 -86579115 + AT_rich Low_complexity Low_complexity 1 72 0 8759 223 20 88 chr10 53737654 53739539 -86577226 + L1PB1 LINE L1 1429 3442 -2709 2265 144 3 29 chr10 53739539 53739913 -86576852 + THE1B LTR MaLR 1 364 0 11223 106 7 1 chr10 53739914 53741483 -86575282 + THE1B-int LTR MaLR 2 1580 0 2268 147 5 30 chr10 53741483 53741851 -86574914 + THE1B LTR MaLR 1 359 -5 8759 223 20 88 chr10 53741851 53744318 -86572447 + L1PB1 LINE L1 3441 5770 -381 641 73 10 0 chr10 53744318 53744414 -86572351 + (TAGA)n Simple_repeat Simple_repeat 1 97 0 8759 223 20 88 chr10 53744414 53744770 -86571995 + L1PB1 LINE L1 5770 6149 -2 312 273 73 53 chr10 53745034 53745430 -86571335 + L1M4c LINE L1 974 1377 -5007 237 264 0 0 chr10 53746287 53746359 -86570406 + GA-rich Low_complexity Low_complexity 3 74 0 2305 92 3 3 chr10 53747303 53747607 -86569158 + AluSx SINE Alu 1 304 -8 1804 271 127 12 chr10 53748031 53748781 -86567984 + L1ME3A LINE L1 5325 6160 -10 467 296 58 65 chr10 53749305 53749761 -86567004 + Charlie8 DNA MER1_type 21 465 -1952 1259 161 55 139 chr10 53750858 53751343 -86565422 + MER4A LTR ERV1 1 258 -207 2077 146 47 16 chr10 53751343 53751707 -86565058 + THE1C LTR MaLR 1 375 0 1259 161 55 139 chr10 53751707 53751899 -86564866 + MER4A LTR ERV1 258 465 0 1358 204 60 51 chr10 53752302 53752362 -86564403 - MER67C LTR ERV1 -8 506 448 2149 127 0 0 chr10 53752362 53752670 -86564095 - AluSg SINE Alu -2 308 1 1358 204 60 51 chr10 53752670 53753154 -86563611 - MER67C LTR ERV1 -66 448 1 672 202 43 25 chr10 53753545 53753688 -86563077 + MLT1E LTR MaLR 25 157 -385 198 260 221 24 chr10 53753747 53753874 -86562891 + MIR3 SINE MIR 41 192 -16 5738 104 44 2 chr10 53753979 53755215 -86561550 + L1PA10 LINE L1 4879 6157 -11 230 217 115 70 chr10 53755601 53755758 -86561007 - Charlie2 DNA MER1_type -32 2830 2667 218 200 0 0 chr10 53755759 53755799 -86560966 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 4133 203 28 20 chr10 53755941 53756678 -86560087 - L1MC3 LINE L1 -8 7777 6872 2463 139 49 2 chr10 53756678 53757087 -86559678 + MSTA LTR MaLR 1 428 0 4133 203 28 20 chr10 53757087 53757594 -86559171 - L1MC3 LINE L1 -913 6872 6371 648 280 86 0 chr10 53757667 53757853 -86558912 + MER63A DNA MER1_type 2 203 -7 386 353 30 18 chr10 53757905 53758072 -86558693 + MIR3 SINE MIR 33 201 -7 1880 208 41 32 chr10 53758363 53758825 -86557940 + MLT1C LTR MaLR 1 466 -1 2313 211 62 42 chr10 53758920 53760529 -86556236 + L1MC1 LINE L1 4528 6332 -1 219 200 9 162 chr10 53760885 53760990 -86555775 - L2 LINE L2 0 3272 3184 220 320 0 62 chr10 53761387 53761484 -86555281 - MIR SINE MIR -87 175 85 23 0 0 0 chr10 53761906 53761929 -86554836 + AT_rich Low_complexity Low_complexity 1 23 0 308 309 49 43 chr10 53763048 53763210 -86553555 - MIR SINE MIR -56 206 44 21209 190 30 19 chr10 53763654 53764403 -86552362 - L1PA12 LINE L1 0 7606 6867 2185 104 6 28 chr10 53764403 53764720 -86552045 - AluSg SINE Alu 0 310 1 21209 190 30 19 chr10 53764720 53766278 -86550487 - L1PA12 LINE L1 -739 6867 5327 2391 80 0 0 chr10 53766278 53766579 -86550186 - AluY SINE Alu -10 301 1 21209 190 30 19 chr10 53766579 53767551 -86549214 - L1PA12 LINE L1 -2279 5327 4367 2013 142 3 3 chr10 53767551 53767860 -86548905 - AluSx SINE Alu -3 309 1 21209 190 30 19 chr10 53767860 53771023 -86545742 - L1PA12 LINE L1 -3239 4367 7 1580 182 20 14 chr10 53771176 53771472 -86545293 + AluJb SINE Alu 2 299 -13 26 88 0 0 chr10 53771594 53771662 -86545103 + AT_rich Low_complexity Low_complexity 1 68 0 300 153 51 17 chr10 53771680 53771739 -86545026 + MLT1E1 LTR MaLR 10 70 -584 286 280 190 45 chr10 53772721 53773032 -86543733 - MLT1I LTR MaLR -33 376 21 931 204 53 45 chr10 53774187 53774502 -86542263 - MER4C LTR ERV1 -3 695 276 1673 129 27 89 chr10 53774505 53774876 -86541889 - MER4A LTR ERV1 -316 348 1 3123 156 50 71 chr10 53775413 53776127 -86540638 + LTR34 LTR ERV1 1 699 0 1752 164 48 0 chr10 53776290 53776583 -86540182 + AluSx SINE Alu 3 309 -3 2446 58 0 0 chr10 53776623 53776914 -86539851 + AluY SINE Alu 1 291 -20 1143 148 21 0 chr10 53777027 53777216 -86539549 - LTR8A LTR ERV1 -534 193 1 294 329 92 40 chr10 53777564 53777716 -86539049 + MIR3 SINE MIR 47 206 -2 1552 250 18 74 chr10 53778314 53779059 -86537706 - L1M4 LINE L1 -3417 2965 2261 1164 217 50 4 chr10 53779070 53779351 -86537414 - L1MA3 LINE L1 -1 6304 6011 381 233 151 7 chr10 53830519 53830665 -86486100 + L1 LINE L1 4791 4957 -1189 6614 111 2 2 chr10 53830675 53831613 -86485152 + L1P LINE L1 1 938 -5208 22 56 0 0 chr10 53831809 53831845 -86484920 + AT_rich Low_complexity Low_complexity 1 36 0 4228 18 0 0 chr10 53832824 53833394 -86483371 - L1P1 LINE L1 -415 5740 5171 2241 104 3 3 chr10 53833504 53833812 -86482953 + AluSp SINE Alu 1 308 -5 380 250 54 68 chr10 53834720 53834868 -86481897 + MER5A DNA MER1_type 38 183 -6 921 261 55 8 chr10 53835774 53836012 -86480753 + MIR SINE MIR 2 250 -12 294 205 0 0 chr10 53836014 53836097 -86480668 + (TA)n Simple_repeat Simple_repeat 2 84 0 358 259 52 91 chr10 53836317 53836549 -86480216 - MIR SINE MIR -31 231 9 610 195 59 0 chr10 53837504 53837622 -86479143 + FLAM_A SINE Alu 1 125 -8 672 48 0 0 chr10 53837631 53837715 -86479050 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 810 242 83 52 chr10 53838275 53838771 -86477994 + L1M4 LINE L1 2957 3467 -2679 1440 205 27 43 chr10 53839402 53839772 -86476993 + L1MC4a LINE L1 7420 7783 -25 6735 127 19 8 chr10 53839776 53840840 -86475925 - Tigger1 DNA MER2_type -1 2417 1343 386 284 226 0 chr10 53842041 53842196 -86474569 + MIR SINE MIR 2 191 -71 410 167 8 11 chr10 53842302 53842428 -86474337 - AluJ/FRAM SINE Alu -16 296 135 216 388 25 0 chr10 53842428 53842508 -86474257 + MIR SINE MIR 50 131 -77 707 257 45 124 chr10 53842872 53843381 -86473384 + MER67C LTR ERV1 42 510 -4 297 0 0 0 chr10 53843468 53843501 -86473264 + (A)n Simple_repeat Simple_repeat 1 33 0 2166 116 0 13 chr10 53844223 53844533 -86472232 + AluSg SINE Alu 1 306 -4 21 0 0 0 chr10 53844533 53844554 -86472211 + AT_rich Low_complexity Low_complexity 1 21 0 2410 85 3 0 chr10 53844775 53845081 -86471684 + AluSp SINE Alu 4 310 -3 2230 125 10 0 chr10 53845452 53845756 -86471009 + AluSq SINE Alu 2 308 -5 283 237 43 140 chr10 53845851 53846129 -86470636 + MLT1H LTR MaLR 96 346 -203 289 317 0 12 chr10 53846365 53846447 -86470318 - MIR3 SINE MIR -14 194 114 217 333 125 10 chr10 53847124 53847220 -86469545 + MIR SINE MIR 39 145 -63 309 89 0 0 chr10 53847841 53847886 -86468879 + (CA)n Simple_repeat Simple_repeat 1 45 0 222 149 21 0 chr10 53848720 53848767 -86467998 + T-rich Low_complexity Low_complexity 2 49 0 2496 189 42 37 chr10 53850019 53850637 -86466128 + L1MC3 LINE L1 7144 7764 -21 2410 245 32 3 chr10 53850787 53851477 -86465288 + L1M4 LINE L1 4562 5271 -875 4307 144 79 8 chr10 53851477 53852226 -86464539 - Tigger2 DNA MER2_type -1 2717 1916 1736 164 32 77 chr10 53852524 53852993 -86463772 - MER83 LTR ERV1 0 448 1 2474 73 0 0 chr10 53853302 53853604 -86463161 - AluY SINE Alu -9 302 1 347 239 46 0 chr10 53853637 53853746 -86463019 + L1MA9 LINE L1 6161 6274 -38 45 55 0 0 chr10 53853812 53853885 -86462880 + AT_rich Low_complexity Low_complexity 1 73 0 21 57 0 0 chr10 53854571 53854606 -86462159 + AT_rich Low_complexity Low_complexity 1 35 0 197 300 91 36 chr10 53854606 53854716 -86462049 - L2 LINE L2 -8 3264 3149 2062 169 91 32 chr10 53854768 53855231 -86461534 - LTR2B LTR ERV1 0 490 1 232 313 104 75 chr10 53855269 53855470 -86461295 - L2 LINE L2 -190 3082 2876 1165 213 114 22 chr10 53856172 53856585 -86460180 - Charlie1 DNA MER1_type -44 2717 2267 996 158 0 38 chr10 53856585 53856771 -86459994 - AluJb SINE Alu 0 312 133 198 353 16 8 chr10 53858992 53859114 -86457651 + L2 LINE L2 2942 3064 -208 372 285 72 0 chr10 53859471 53859592 -86457173 - MIR3 SINE MIR -21 187 58 282 252 70 35 chr10 53860755 53860870 -86455895 + MIR3 SINE MIR 73 191 -17 977 282 55 14 chr10 53862825 53863232 -86453533 - L1M3de LINE L1 -4957 1696 1288 254 284 54 0 chr10 53863206 53863280 -86453485 - L1M3de LINE L1 -5241 1422 1345 * 745 330 49 25 chr10 53863382 53863828 -86452937 - L1M3de LINE L1 -5684 979 523 22 35 0 0 chr10 53863838 53863867 -86452898 + AT_rich Low_complexity Low_complexity 1 29 0 276 271 16 74 chr10 53864513 53864635 -86452130 - L3b LINE CR1 -223 1360 1246 622 318 30 10 chr10 53865345 53865543 -86451222 - LTR16A LTR ERVL -8 442 241 820 298 52 21 chr10 53866424 53866864 -86449901 - MLT1F1 LTR MaLR -33 534 1 5313 177 35 9 chr10 53867287 53868847 -86447918 - L1MA4A LINE L1 -5 7360 5759 2596 223 22 0 chr10 53868851 53869387 -86447378 - L1MA4A LINE L1 -6642 567 1 22 35 0 0 chr10 53869622 53869651 -86447114 + AT_rich Low_complexity Low_complexity 1 29 0 1925 172 0 0 chr10 53869719 53870021 -86446744 + AluSx SINE Alu 1 302 -10 273 329 202 30 chr10 53870326 53870657 -86446108 + L2 LINE L2 2926 3313 0 315 0 0 0 chr10 53870718 53870753 -86446012 + (TG)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr10 53871365 53871394 -86445371 + AT_rich Low_complexity Low_complexity 1 29 0 1178 174 5 15 chr10 53871456 53871652 -86445113 - AluJb SINE Alu -35 277 84 21 57 0 0 chr10 53872924 53872959 -86443806 + AT_rich Low_complexity Low_complexity 1 35 0 28 91 0 0 chr10 53873112 53873189 -86443576 + AT_rich Low_complexity Low_complexity 1 77 0 1415 187 53 14 chr10 53874664 53874947 -86441818 + AluJb SINE Alu 1 294 -18 259 27 0 27 chr10 53875996 53876033 -86440732 - AluY SINE Alu -9 299 264 21 0 0 0 chr10 53876041 53876062 -86440703 + AT_rich Low_complexity Low_complexity 1 21 0 2167 168 49 9 chr10 53876554 53876987 -86439778 - MER61C LTR ERV1 0 434 1 3043 253 62 21 chr10 53877063 53878522 -86438243 + L1MDa LINE L1 2362 3888 -2652 2397 85 0 0 chr10 53879668 53879973 -86436792 + AluY SINE Alu 7 311 0 198 0 0 0 chr10 53879992 53880014 -86436751 + (GA)n Simple_repeat Simple_repeat 1 22 0 1829 187 65 17 chr10 53880861 53881279 -86435486 - LTR56 LTR ERV1 0 445 8 1379 192 3 72 chr10 53883648 53883966 -86432799 - AluJo SINE Alu -16 296 1 1129 264 134 72 chr10 53883999 53884511 -86432254 + MLT1G1 LTR MaLR 1 590 -4 752 359 138 31 chr10 53884679 53884809 -86431956 + L2 LINE L2 451 566 -2748 2294 172 45 5 chr10 53884809 53885252 -86431513 + LOR1b LTR ERV1 1 461 0 752 359 138 31 chr10 53885252 53886457 -86430308 + L2 LINE L2 566 2070 -1244 1583 219 144 29 chr10 53886457 53886909 -86429856 + MLT1D LTR MaLR 1 504 -1 752 359 138 31 chr10 53886909 53887560 -86429205 + L2 LINE L2 2070 2650 -664 360 274 70 100 chr10 53887842 53888083 -86428682 + L2 LINE L2 3080 3313 0 207 0 0 0 chr10 53888255 53888278 -86428487 + (T)n Simple_repeat Simple_repeat 1 23 0 3308 181 12 41 chr10 53888479 53889235 -86427530 - L1MC2 LINE L1 -8 6336 5603 387 141 0 0 chr10 53889235 53889299 -86427466 + (TA)n Simple_repeat Simple_repeat 2 65 0 1223 204 128 7 chr10 53889338 53889642 -86427123 - L1MC2 LINE L1 -735 5609 5269 181 407 82 15 chr10 53889991 53890126 -86426639 - L2 LINE L2 -5 3267 3124 265 303 101 91 chr10 53890230 53890616 -86426149 - L2 LINE L2 -62 3251 2862 28 0 0 0 chr10 53891214 53891242 -86425523 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 53891247 53891271 -86425494 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6515 166 11 33 chr10 53891777 53892722 -86424043 - Tigger2 DNA MER2_type -655 2063 1151 2158 120 0 0 chr10 53892722 53893022 -86423743 - AluSg1 SINE Alu -9 300 1 6515 166 11 33 chr10 53893022 53893319 -86423446 - Tigger2 DNA MER2_type -1567 1151 849 685 134 65 168 chr10 53893319 53893551 -86423214 + AluJo SINE Alu 85 292 -20 4962 153 14 11 chr10 53893551 53894405 -86422360 - Tigger2 DNA MER2_type -1861 857 1 332 107 60 0 chr10 53895545 53895629 -86421136 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 25 31 0 0 chr10 53896262 53896294 -86420471 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 53896362 53896385 -86420380 + AT_rich Low_complexity Low_complexity 1 23 0 276 360 11 0 chr10 53896786 53896875 -86419890 - MIR SINE MIR -170 92 3 2010 155 0 10 chr10 53897180 53897490 -86419275 + AluSx SINE Alu 1 307 -5 1005 241 14 0 chr10 53897769 53897985 -86418780 - MER20 DNA MER1_type 0 219 1 27 87 0 0 chr10 53898108 53898177 -86418588 + AT_rich Low_complexity Low_complexity 1 69 0 2237 89 17 0 chr10 53899389 53899682 -86417083 + AluY SINE Alu 1 298 -13 180 0 0 0 chr10 53899694 53899714 -86417051 + (CA)n Simple_repeat Simple_repeat 2 21 0 2010 116 10 22 chr10 53900622 53900933 -86415832 - AluSx SINE Alu 0 312 6 216 354 83 7 chr10 53901523 53901667 -86415098 + MIR SINE MIR 59 213 -49 9614 25 3 1 chr10 53903805 53905718 -86411047 - L1PA3 LINE L1 -3 6152 4237 203 189 0 0 chr10 53906286 53906323 -86410442 + (TTA)n Simple_repeat Simple_repeat 1 37 0 1348 189 52 58 chr10 53906338 53906449 -86410316 + MLT1B LTR MaLR 3 113 -277 2183 119 7 7 chr10 53906449 53906759 -86410006 + AluSx SINE Alu 3 312 0 1348 189 52 58 chr10 53906759 53906938 -86409827 + MLT1B LTR MaLR 113 291 -99 1479 190 42 3 chr10 53906986 53907275 -86409490 - AluJo SINE Alu -12 300 1 2167 117 0 0 chr10 53907400 53907699 -86409066 - AluSg SINE Alu -9 301 3 250 276 188 35 chr10 53908691 53908861 -86407904 - MIR SINE MIR -12 250 55 5325 72 16 10 chr10 53909382 53910089 -86406676 + LTR17 LTR ERV1 1 711 -69 1820 73 0 0 chr10 53910074 53910320 -86406445 - pTR5 LTR ERV1 -2046 392 147 * 1104 104 120 11 chr10 53910308 53910491 -86406274 + LTR17 LTR ERV1 577 779 -1 * 207 0 0 0 chr10 53911585 53911608 -86405157 + (CA)n Simple_repeat Simple_repeat 2 24 0 770 178 0 0 chr10 53911654 53911783 -86404982 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr10 53911979 53912000 -86404765 + AT_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr10 53912185 53912242 -86404523 + AT_rich Low_complexity Low_complexity 1 57 0 608 258 24 12 chr10 53912667 53912834 -86403931 + MER87 LTR ERV1 373 541 0 300 203 78 0 chr10 53913392 53913456 -86403309 - L2 LINE L2 -55 3258 3190 3790 166 55 3 chr10 53914558 53915233 -86401532 - MER50 LTR ERV1 -24 710 1 36 77 0 0 chr10 53915266 53915344 -86401421 + AT_rich Low_complexity Low_complexity 1 78 0 24 32 0 0 chr10 53915467 53915498 -86401267 + AT_rich Low_complexity Low_complexity 1 31 0 2026 98 0 4 chr10 53915911 53916185 -86400580 - AluSq SINE Alu -3 310 38 7414 186 22 26 chr10 53916243 53918644 -86398121 + L1PA16 LINE L1 1 2047 -4802 5264 188 36 13 chr10 53918640 53918900 -86397865 + L1PA16 LINE L1 4748 5000 -1869 * 2448 148 19 12 chr10 53918900 53919325 -86397440 - MSTA LTR MaLR 0 428 1 5264 188 36 13 chr10 53919325 53921139 -86395626 + L1PA16 LINE L1 5000 6869 0 318 242 144 23 chr10 53921170 53921302 -86395463 - L1MC5 LINE L1 -298 7663 7516 215 275 0 0 chr10 53921791 53921871 -86394894 + A-rich Low_complexity Low_complexity 3 82 0 227 236 28 69 chr10 53922029 53922101 -86394664 + L1ME LINE L1 5604 5672 -449 21 0 0 0 chr10 53922191 53922212 -86394553 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr10 53923184 53923239 -86393526 + AT_rich Low_complexity Low_complexity 1 55 0 1521 203 3 10 chr10 53923239 53923529 -86393236 - AluJo SINE Alu -21 291 4 22 0 0 0 chr10 53927281 53927303 -86389462 + AT_rich Low_complexity Low_complexity 1 22 0 411 358 19 0 chr10 53928114 53928276 -86388489 - MIR SINE MIR -93 169 5 228 268 0 14 chr10 53929270 53929341 -86387424 - L1MC4 LINE L1 -30 8012 7943 746 68 29 51 chr10 53929395 53929632 -86387133 + (TCTA)n Simple_repeat Simple_repeat 1 231 0 3735 247 122 38 chr10 53929681 53929841 -86386924 - L1MC4 LINE L1 -141 7901 7756 866 246 28 0 chr10 53929841 53930056 -86386709 - MER58A DNA MER1_type -1 223 3 3735 247 122 38 chr10 53930056 53931820 -86384945 - L1MC4 LINE L1 -286 7756 5784 1524 193 30 33 chr10 53931820 53932120 -86384645 - AluJo SINE Alu -6 306 8 3735 247 122 38 chr10 53932120 53932288 -86384477 - L1MC4 LINE L1 -2258 5784 5631 751 155 16 82 chr10 53933476 53933670 -86383095 - L1MA10 LINE L1 -3 6331 6151 2959 205 46 28 chr10 53933675 53933995 -86382770 - L1MB1 LINE L1 0 6291 5978 1973 144 6 6 chr10 53933995 53934307 -86382458 + AluSx SINE Alu 1 312 0 2959 205 46 28 chr10 53934307 53934767 -86381998 - L1MB1 LINE L1 -313 5978 5453 237 250 0 0 chr10 53934767 53934823 -86381942 - MLT2A1 LTR ERVL 0 444 389 1554 237 21 0 chr10 53934827 53935152 -86381613 - MLT1A1 LTR MaLR -1 364 33 1649 201 44 20 chr10 53935152 53935599 -86381166 + L1M3 LINE L1 4986 5438 -730 82 21 0 0 chr10 53935664 53935760 -86381005 + AT_rich Low_complexity Low_complexity 1 96 0 504 320 81 14 chr10 53935849 53936071 -86380694 - MIR SINE MIR -10 252 16 686 357 106 31 chr10 53936374 53937006 -86379759 + L2 LINE L2 2247 2982 -331 2324 34 0 20 chr10 53937006 53937300 -86379465 - AluY SINE Alu -9 302 15 686 357 106 31 chr10 53937300 53937566 -86379199 + L2 LINE L2 2982 3227 -86 261 362 31 15 chr10 53937602 53937798 -86378967 - MIR SINE MIR -51 211 13 769 177 63 0 chr10 53938901 53939059 -86377706 + MER2 DNA MER2_type 43 210 -135 2050 128 0 3 chr10 53939699 53939987 -86376778 + AluSx SINE Alu 7 293 -19 288 249 230 24 chr10 53940881 53941046 -86375719 - MIR SINE MIR -57 205 7 392 282 0 0 chr10 53942688 53942791 -86373974 + MIR SINE MIR 102 204 -58 21 0 0 0 chr10 53942864 53942885 -86373880 + AT_rich Low_complexity Low_complexity 1 21 0 199 368 15 0 chr10 53943253 53943321 -86373444 + MIR SINE MIR 38 106 -102 412 333 6 33 chr10 53943586 53943769 -86372996 - Charlie8 DNA MER1_type -2160 257 80 226 265 15 44 chr10 53943852 53943920 -86372845 - L3 LINE CR1 -41 1536 1471 189 349 155 38 chr10 53943994 53944258 -86372507 - L3 LINE CR1 -141 1436 1142 1850 135 6 83 chr10 53944328 53944690 -86372075 - MER1B DNA MER1_type 0 337 4 24 0 0 0 chr10 53944985 53945009 -86371756 + AT_rich Low_complexity Low_complexity 1 24 0 7679 19 3 0 chr10 53945079 53946202 -86370563 - L1PA3 LINE L1 0 6155 5034 3910 22 0 0 chr10 53946202 53946658 -86370107 + L1P LINE L1 3745 4200 -1946 226 256 0 160 chr10 53948520 53948609 -86368156 + MIR SINE MIR 84 149 -113 1589 247 111 50 chr10 53948609 53948850 -86367915 - MLT1E1 LTR MaLR -2 652 427 2346 70 0 13 chr10 53948850 53949163 -86367602 - AluY SINE Alu -2 309 1 1589 247 111 50 chr10 53949163 53949536 -86367229 - MLT1E1 LTR MaLR -227 427 1 226 256 0 160 chr10 53949536 53949571 -86367194 + MIR SINE MIR 149 188 -74 601 117 12 37 chr10 53952001 53952163 -86364602 + (TA)n Simple_repeat Simple_repeat 1 158 0 1280 136 5 0 chr10 53952163 53952354 -86364411 + AluSq SINE Alu 117 308 -5 198 0 0 0 chr10 53952431 53952453 -86364312 + (TA)n Simple_repeat Simple_repeat 1 22 0 440 243 148 71 chr10 53952849 53953059 -86363706 - MIR SINE MIR 0 262 37 19070 44 10 0 chr10 53953859 53956996 -86359769 - L1PA5 LINE L1 -6 6148 2972 1694 65 4 0 chr10 53957125 53957354 -86359411 - L1PA7 LINE L1 -1 6153 5924 657 231 0 14 chr10 53957607 53957750 -86359015 + MER45A DNA AcHobo 37 177 -1 208 331 21 35 chr10 53957881 53958026 -86358739 - L2 LINE L2 -213 3059 2917 2026 149 0 0 chr10 53959442 53959738 -86357027 + AluSx SINE Alu 1 296 -16 1196 273 84 37 chr10 53959858 53959989 -86356776 + L1ME3A LINE L1 4896 5019 -1151 1851 154 13 3 chr10 53959989 53960288 -86356477 + AluSp SINE Alu 1 302 -11 1196 273 84 37 chr10 53960288 53961043 -86355722 + L1ME3A LINE L1 5019 5830 -340 2073 137 3 13 chr10 53961111 53961444 -86355321 - AluSq SINE Alu 0 313 1 892 224 68 0 chr10 53961589 53961781 -86354984 + MER58A DNA MER1_type 20 224 0 317 341 81 36 chr10 53962187 53962410 -86354355 - L3 LINE CR1 -2 1575 1343 751 335 83 50 chr10 53962840 53963324 -86353441 - L2 LINE L2 0 3313 2814 1121 188 80 122 chr10 53963515 53964000 -86352765 + MER4C LTR ERV1 1 465 0 255 344 11 22 chr10 53964008 53964098 -86352667 - L2 LINE L2 -662 2652 2564 1569 195 162 5 chr10 53965076 53965446 -86351319 + MLT2B2 LTR ERVL 53 480 -35 263 146 18 18 chr10 53965463 53965518 -86351247 + MLT2B2 LTR ERVL 459 513 -2 278 333 0 0 chr10 53965572 53965653 -86351112 + MIR SINE MIR 100 180 -82 698 319 178 15 chr10 53966041 53966601 -86350164 - L2 LINE L2 0 3313 2667 419 313 30 0 chr10 53966659 53966793 -86349972 - MIR SINE MIR -1 261 124 1538 227 42 62 chr10 53968440 53968911 -86347854 - MLT1C LTR MaLR 0 467 6 311 0 26 0 chr10 53969149 53969188 -86347577 + (TA)n Simple_repeat Simple_repeat 1 40 0 427 327 111 22 chr10 53969662 53969977 -86346788 + LTR16C LTR ERVL 149 491 0 281 294 224 0 chr10 53970394 53970479 -86346286 - L2 LINE L2 -8 3264 3161 2150 107 7 0 chr10 53970676 53970974 -86345791 + AluSx SINE Alu 1 300 -12 28 29 0 0 chr10 53971437 53971472 -86345293 + AT_rich Low_complexity Low_complexity 1 35 0 743 249 24 0 chr10 53973182 53973351 -86343414 + MER5B DNA MER1_type 5 177 -1 1321 173 68 149 chr10 53973768 53974310 -86342455 + MER67D LTR ERV1 13 510 -4 322 292 58 36 chr10 53974325 53974462 -86342303 + MIR SINE MIR 58 197 -65 2337 97 0 0 chr10 53974992 53975300 -86341465 - AluY SINE Alu -1 310 3 180 179 0 0 chr10 53976187 53976226 -86340539 + (CA)n Simple_repeat Simple_repeat 1 39 0 2927 181 48 63 chr10 53976549 53977346 -86339419 - LTR1 LTR ERV1 0 785 1 1241 322 105 18 chr10 53978172 53978836 -86337929 + L2 LINE L2 1376 2097 -1217 511 269 50 15 chr10 53978893 53979094 -86337671 + L1MEc LINE L1 1087 1294 -5451 565 131 12 0 chr10 53979103 53979187 -86337578 + AluJ/FLAM SINE Alu 1 85 -227 14501 57 1 0 chr10 53979180 53981845 -86334920 + L1PA5 LINE L1 3482 6153 -1 1522 164 27 10 chr10 53981845 53982137 -86334628 - MER4D LTR ERV1 -606 297 1 1114 242 50 50 chr10 53982137 53982554 -86334211 - LTR38 LTR ERV1 -3 553 137 827 294 4 0 chr10 53982628 53982900 -86333865 + L1MEc LINE L1 2863 3135 -3429 1430 189 4 4 chr10 53982945 53983210 -86333555 - AluJb SINE Alu -20 292 28 1087 295 106 10 chr10 53983234 53983953 -86332812 + L1MEc LINE L1 3191 3978 -2586 586 258 18 9 chr10 53983953 53984126 -86332639 + MER4E LTR ERV1 1 283 -589 1765 204 11 6 chr10 53984128 53984480 -86332285 + MER4D LTR ERV1 550 903 0 621 275 163 70 chr10 53984532 53985030 -86331735 + L1MEc LINE L1 4 547 -5498 400 102 0 0 chr10 53985030 53985089 -86331676 + MER39B LTR ERV1 1 59 -594 499 202 71 0 chr10 53985090 53985189 -86331576 + L1MEc LINE L1 4524 4629 -1935 841 223 22 11 chr10 53985274 53985458 -86331307 - MLT1A2 LTR MaLR -5 369 184 310 126 45 17 chr10 53985494 53985566 -86331199 - MSTC LTR MaLR -324 72 1 1369 193 28 55 chr10 53985566 53985929 -86330836 + L1MC3 LINE L1 7295 7647 -138 24 67 0 0 chr10 53985993 53986038 -86330727 + AT_rich Low_complexity Low_complexity 1 45 0 784 227 28 127 chr10 53986038 53986168 -86330597 + L1ME1 LINE L1 3883 4024 -2122 2143 129 0 3 chr10 53986168 53986478 -86330287 + AluSq SINE Alu 1 309 -4 784 227 28 127 chr10 53986478 53986924 -86329841 + L1ME1 LINE L1 4024 4379 -1767 2343 240 92 14 chr10 53986933 53987595 -86329170 + L1ME1 LINE L1 5336 6049 -117 23 0 0 0 chr10 53987670 53987693 -86329072 + AT_rich Low_complexity Low_complexity 1 23 0 6993 151 62 2 chr10 53988352 53989586 -86327179 - Tigger1 DNA MER2_type -1 2417 1111 2668 159 25 6 chr10 53989590 53990063 -86326702 - Tigger1 DNA MER2_type -1935 483 2 2218 107 0 0 chr10 53990557 53990855 -86325910 + AluSx SINE Alu 1 298 -14 1507 187 78 26 chr10 53992028 53992375 -86324390 - MER47A DNA MER2_type 0 366 2 591 249 24 24 chr10 53993192 53993361 -86323404 + MIR SINE MIR 69 237 -25 2370 175 19 14 chr10 53993533 53993956 -86322809 - MSTA LTR MaLR -1 427 3 6680 189 40 5 chr10 53993958 53995191 -86321574 - MSTA-int LTR MaLR 0 1651 376 36957 37 27 2 chr10 53995663 54001095 -86315670 - L1PA3 LINE L1 -3 6467 893 550 87 0 0 chr10 54001062 54001160 -86315605 - L1PA3 LINE L1 -6081 380 10 * 596 269 224 0 chr10 54001191 54001392 -86315373 - MIR SINE MIR -11 251 6 24 32 0 0 chr10 54001452 54001483 -86315282 + AT_rich Low_complexity Low_complexity 1 31 0 1399 220 48 3 chr10 54002315 54002610 -86314155 - AluJo SINE Alu -4 308 1 399 236 69 56 chr10 54002700 54002895 -86313870 - MER63 DNA MER1_type -14 1674 5 222 281 11 56 chr10 54005501 54005590 -86311175 - L2 LINE L2 0 3272 3188 24 32 0 0 chr10 54006876 54006907 -86309858 + AT_rich Low_complexity Low_complexity 1 31 0 184 30 61 0 chr10 54008535 54008568 -86308197 + T-rich Low_complexity Low_complexity 2 36 0 22 0 0 0 chr10 54009653 54009675 -86307090 + AT_rich Low_complexity Low_complexity 1 22 0 28 61 0 0 chr10 54010143 54010192 -86306573 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr10 54011162 54011185 -86305580 + AT_rich Low_complexity Low_complexity 1 23 0 218 157 0 20 chr10 54011919 54011970 -86304795 + (TA)n Simple_repeat Simple_repeat 2 51 0 218 191 0 44 chr10 54012566 54012634 -86304131 + CT-rich Low_complexity Low_complexity 2 66 0 27 62 0 0 chr10 54015087 54015135 -86301630 + AT_rich Low_complexity Low_complexity 1 48 0 2189 89 0 19 chr10 54015816 54016130 -86300635 - AluY SINE Alu -3 308 1 24 0 0 0 chr10 54016460 54016484 -86300281 + AT_rich Low_complexity Low_complexity 1 24 0 456 275 103 26 chr10 54016596 54016829 -86299936 + Charlie8 DNA MER1_type 37 287 -2130 493 282 78 20 chr10 54017036 54017442 -86299323 + L1ME3A LINE L1 5457 5947 -223 285 198 47 47 chr10 54017502 54017588 -86299177 + L1ME3A LINE L1 6077 6162 -8 2352 88 0 0 chr10 54018303 54018599 -86298166 + AluSc SINE Alu 3 298 -11 22 35 0 0 chr10 54018841 54018870 -86297895 + AT_rich Low_complexity Low_complexity 1 29 0 239 303 77 17 chr10 54018963 54019102 -86297663 - MIR SINE MIR -65 143 20 37 69 0 0 chr10 54019304 54019376 -86297389 + AT_rich Low_complexity Low_complexity 1 72 0 1072 110 13 0 chr10 54021129 54021284 -86295481 - AluSg/x SINE Alu 0 312 156 274 270 0 0 chr10 54025848 54025922 -86290843 + GA-rich Low_complexity Low_complexity 1 74 0 504 228 0 0 chr10 54025964 54026109 -86290656 + GA-rich Low_complexity Low_complexity 3 147 0 31 44 0 0 chr10 54028452 54028497 -86288268 + AT_rich Low_complexity Low_complexity 1 45 0 215 133 22 0 chr10 54030644 54030689 -86286076 + (TA)n Simple_repeat Simple_repeat 1 46 0 362 82 109 18 chr10 54030899 54031009 -86285756 + (CATAA)n Simple_repeat Simple_repeat 2 121 0 24 32 0 0 chr10 54031045 54031076 -86285689 + AT_rich Low_complexity Low_complexity 1 31 0 236 302 62 42 chr10 54031463 54031559 -86285206 + L2 LINE L2 3204 3301 -12 21 36 0 0 chr10 54031646 54031674 -86285091 + AT_rich Low_complexity Low_complexity 1 28 0 326 369 25 12 chr10 54034847 54035007 -86281758 + MIR SINE MIR 36 197 -65 2196 75 3 7 chr10 54035047 54035342 -86281423 - AluY SINE Alu -17 294 1 191 369 22 45 chr10 54037504 54037683 -86279082 - MIR3 SINE MIR -29 179 5 207 0 0 0 chr10 54037987 54038010 -86278755 + (TG)n Simple_repeat Simple_repeat 2 24 0 1602 119 0 4 chr10 54038028 54038255 -86278510 - AluSg SINE Alu -41 269 44 1839 185 11 3 chr10 54038489 54038907 -86277858 - MSTA-int LTR MaLR -1161 419 1 2409 158 26 19 chr10 54038907 54039332 -86277433 - MSTA LTR MaLR 0 428 1 250 296 120 9 chr10 54039576 54039684 -86277081 - MLT1I LTR MaLR -196 213 94 1258 154 111 55 chr10 54039691 54040058 -86276707 + MSTA LTR MaLR 1 428 0 209 236 153 14 chr10 54040278 54040350 -86276415 + L2 LINE L2 3192 3273 -40 23 0 0 0 chr10 54040922 54040945 -86275820 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 54041192 54041223 -86275542 + AT_rich Low_complexity Low_complexity 1 31 0 2168 318 79 12 chr10 54041343 54041903 -86274862 - L1ME1 LINE L1 -2 6662 6141 1799 161 3 26 chr10 54041903 54042214 -86274551 + AluSx SINE Alu 1 304 -8 2168 318 79 12 chr10 54042214 54042635 -86274130 - L1ME1 LINE L1 -523 6141 5613 * 2395 269 142 6 chr10 54042624 54043356 -86273409 - L1ME1 LINE L1 -5703 839 8 29 60 0 0 chr10 54043481 54043531 -86273234 + AT_rich Low_complexity Low_complexity 1 50 0 340 380 27 11 chr10 54044176 54044363 -86272402 + MIR SINE MIR 2 191 -71 194 152 0 0 chr10 54044528 54044561 -86272204 - L2 LINE L2 -245 3068 3036 492 143 0 45 chr10 54044590 54044723 -86272042 + (TA)n Simple_repeat Simple_repeat 2 128 0 226 200 38 38 chr10 54045655 54045760 -86271005 + (TTAAA)n Simple_repeat Simple_repeat 3 107 0 29 47 0 0 chr10 54045847 54045890 -86270875 + AT_rich Low_complexity Low_complexity 1 43 0 2213 97 97 3 chr10 54046444 54046774 -86269991 - THE1B LTR MaLR -1 363 3 21 71 0 0 chr10 54046880 54046922 -86269843 + AT_rich Low_complexity Low_complexity 1 42 0 209 238 0 0 chr10 54047409 54047451 -86269314 + A-rich Low_complexity Low_complexity 1 42 0 1039 79 0 0 chr10 54048225 54048364 -86268401 + AluY SINE Alu 167 305 -6 216 228 35 35 chr10 54048431 54048488 -86268277 + L2 LINE L2 3249 3305 -8 784 227 0 107 chr10 54050107 54050332 -86266433 + Tigger7 DNA MER2_type 1 201 -2286 641 208 56 0 chr10 54050332 54050476 -86266289 + L1MA10 LINE L1 4744 4895 -1251 2127 207 32 44 chr10 54050638 54051582 -86265183 + L1MA10 LINE L1 4847 5795 -373 602 291 105 29 chr10 54051582 54051942 -86264823 + MER57A LTR ERV1 9 400 -2 2159 236 15 9 chr10 54051945 54052492 -86264273 + L1MA10 LINE L1 5785 6334 0 463 301 81 23 chr10 54052700 54053096 -86263669 + L1ME LINE L1 4015 4433 -1713 562 129 0 0 chr10 54053430 54053515 -86263250 - MSTD LTR MaLR 0 396 312 242 250 36 86 chr10 54053615 54053636 -86263129 + L1ME LINE L1 5410 5431 -735 2203 75 3 26 chr10 54053636 54053944 -86262821 + AluY SINE Alu 1 301 -10 242 250 36 86 chr10 54053944 54054062 -86262703 + L1ME LINE L1 5430 5542 -624 675 283 18 110 chr10 54055173 54055565 -86261200 - LTR41 LTR ERVL -84 689 334 297 234 26 0 chr10 54055542 54055619 -86261146 + LTR40c LTR ERVL 60 138 -327 * 1522 251 45 37 chr10 54055703 54056212 -86260553 - HERVL40 LTR ERVL -51 5479 4967 691 297 0 0 chr10 54056399 54056554 -86260211 - HERVL40 LTR ERVL -938 4592 4438 900 300 19 16 chr10 54056658 54056915 -86259850 - HERVL40 LTR ERVL -1355 4175 3918 255 318 103 0 chr10 54056899 54057006 -86259759 - HERVL40 LTR ERVL -1882 3648 3531 * 1215 281 40 28 chr10 54057016 54057567 -86259198 - HERVL40 LTR ERVL -2138 3392 2802 760 156 0 38 chr10 54057623 54057809 -86258956 + GA-rich Low_complexity Low_complexity 2 180 0 188 33 0 33 chr10 54060931 54060961 -86255804 + (CACCC)n Simple_repeat Simple_repeat 5 33 0 839 215 0 0 chr10 54061187 54061350 -86255415 - FRAM SINE Alu 0 166 4 1309 78 0 62 chr10 54061376 54061618 -86255147 - L1PA2 LINE L1 -4 6151 5925 322 148 0 19 chr10 54061756 54061810 -86254955 - MSTB1 LTR MaLR -377 55 3 2388 166 19 7 chr10 54063141 54063562 -86253203 + MSTB LTR MaLR 1 426 0 7480 22 0 24 chr10 54064112 54065287 -86251478 - L1PA4 LINE L1 0 6155 4994 1258 211 9 77 chr10 54065321 54065436 -86251329 + MLT1B LTR MaLR 65 186 -204 1845 171 7 3 chr10 54065436 54065735 -86251030 + AluJb SINE Alu 1 300 -12 1258 211 9 77 chr10 54065735 54065969 -86250796 + MLT1B LTR MaLR 186 390 0 23 33 0 0 chr10 54066748 54066778 -86249987 + AT_rich Low_complexity Low_complexity 1 30 0 2356 81 0 0 chr10 54067355 54067664 -86249101 + AluY SINE Alu 1 309 -2 218 283 59 86 chr10 54067774 54067926 -86248839 - L2 LINE L2 -8 3305 3158 207 0 0 0 chr10 54067947 54067970 -86248795 + (TA)n Simple_repeat Simple_repeat 1 23 0 326 283 115 9 chr10 54067986 54068099 -86248666 + L2 LINE L2 3187 3311 -2 2067 138 123 5 chr10 54068368 54068751 -86248014 - MSTA LTR MaLR 0 428 1 1779 181 51 0 chr10 54068753 54069084 -86247681 - MER7A DNA MER2_type 0 346 1 344 331 35 30 chr10 54070519 54070688 -86246077 - MIR SINE MIR -73 189 20 239 226 94 47 chr10 54071616 54071722 -86245043 + L1ME3A LINE L1 5962 6072 -98 259 285 99 42 chr10 54071779 54072091 -86244674 + L1MEc LINE L1 1266 1595 -4801 1325 262 48 61 chr10 54072091 54072648 -86244117 + MER68 LTR ERV1 2 551 -11 671 283 94 34 chr10 54072854 54073119 -86243646 + MER57A LTR ERV1 123 403 0 665 284 75 62 chr10 54073364 54074030 -86242735 + L1MEc LINE L1 2418 3073 -3142 1939 159 0 0 chr10 54074030 54074331 -86242434 - AluSx SINE Alu -9 303 3 665 284 75 62 chr10 54074331 54074549 -86242216 + L1MEc LINE L1 3073 3321 -2894 2599 124 36 12 chr10 54074549 54074967 -86241798 - MSTA LTR MaLR 0 428 1 665 284 75 62 chr10 54074967 54075116 -86241649 + L1MEc LINE L1 3321 3466 -2749 272 306 24 32 chr10 54075167 54075291 -86241474 + MLT1B-int LTR MaLR 1 123 -1248 2240 94 3 0 chr10 54075949 54076246 -86240519 - AluY SINE Alu -13 298 1 504 271 61 102 chr10 54076513 54076874 -86239891 + MLT1B-int LTR MaLR 1025 1370 -1 1044 274 88 35 chr10 54076928 54077267 -86239498 + MLT1G LTR MaLR 51 407 -183 1349 171 19 11 chr10 54077424 54077688 -86239077 + L1PA15 LINE L1 5887 6152 -13 2376 71 0 3 chr10 54128011 54128320 -86188445 + AluY SINE Alu 1 308 -3 591 112 0 0 chr10 54128687 54128776 -86187989 + (TA)n Simple_repeat Simple_repeat 1 89 0 1464 260 163 26 chr10 54129110 54130010 -86186755 + L1ME3A LINE L1 5120 6147 -23 2149 107 3 3 chr10 54130062 54130362 -86186403 + AluY SINE Alu 1 300 -11 1813 137 10 57 chr10 54131589 54131903 -86184862 + AluSx SINE Alu 1 299 -13 393 203 13 13 chr10 54132009 54132087 -86184678 + Tigger5 DNA MER2_type 1 78 -2245 312 114 0 0 chr10 54132087 54132131 -86184634 - Tigger5 DNA MER2_type -3 2320 2277 * 412 176 33 11 chr10 54132129 54132220 -86184545 - MER94 DNA DNA -35 99 7 252 329 53 29 chr10 54132657 54132827 -86183938 + L2 LINE L2 2681 2854 -460 874 167 98 54 chr10 54133506 54133710 -86183055 + AluJo SINE Alu 87 299 -13 24 0 0 0 chr10 54134143 54134167 -86182598 + AT_rich Low_complexity Low_complexity 1 24 0 384 346 24 0 chr10 54134871 54134998 -86181767 + LTR16B LTR ERVL 1 130 -334 6380 194 102 29 chr10 54135628 54137158 -86179607 - MER52A LTR ERV1 0 1755 1 25 31 0 0 chr10 54137562 54137594 -86179171 + AT_rich Low_complexity Low_complexity 1 32 0 2220 89 0 4 chr10 54137743 54138059 -86178706 - AluY SINE Alu 0 315 1 1393 84 0 11 chr10 54138480 54138670 -86178095 - AluSg SINE Alu -122 188 1 427 189 50 10 chr10 54139063 54139190 -86177575 + L1MA8 LINE L1 5994 6120 -48 23 0 0 0 chr10 54139785 54139808 -86176957 + AT_rich Low_complexity Low_complexity 1 23 0 3395 97 4 6 chr10 54139808 54140283 -86176482 + L1PB1 LINE L1 5659 6132 -19 468 143 10 41 chr10 54140286 54140384 -86176381 - L1PA13 LINE L1 -1 6162 6068 29 47 0 0 chr10 54140385 54140428 -86176337 + AT_rich Low_complexity Low_complexity 1 43 0 181 275 121 11 chr10 54140483 54140574 -86176191 - L2 LINE L2 -86 3227 3127 340 89 0 0 chr10 54140703 54140748 -86176017 - 5S rRNA rRNA -75 46 2 219 348 84 26 chr10 54141107 54141262 -86175503 - MIR3 SINE MIR -25 183 20 229 341 63 8 chr10 54141271 54141397 -86175368 + MIR SINE MIR 14 146 -116 272 391 19 19 chr10 54142252 54142408 -86174357 + MIR SINE MIR 13 168 -94 191 35 0 35 chr10 54142451 54142480 -86174285 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 227 130 43 0 chr10 54142735 54142781 -86173984 - L1M4 LINE L1 -867 5279 5232 3350 160 0 8 chr10 54142907 54143438 -86173327 + MER1A DNA MER1_type 1 527 0 50 42 0 0 chr10 54143741 54143812 -86172953 + AT_rich Low_complexity Low_complexity 1 71 0 2463 178 30 59 chr10 54143855 54144305 -86172460 - L1MB3 LINE L1 0 6183 5751 2684 42 0 0 chr10 54144305 54144613 -86172152 - AluY SINE Alu -3 308 1 2463 178 30 59 chr10 54144613 54144719 -86172046 - L1MB3 LINE L1 -432 5751 5643 518 309 87 36 chr10 54145025 54145277 -86171488 - MLT1L LTR MaLR -350 265 1 251 335 23 64 chr10 54146257 54146430 -86170335 + L2 LINE L2 2882 3047 -225 424 105 12 35 chr10 54146535 54146621 -86170144 + (TC)n Simple_repeat Simple_repeat 1 84 0 584 327 111 62 chr10 54146781 54147395 -86169370 + L2 LINE L2 137 780 -2534 324 340 105 0 chr10 54147395 54147548 -86169217 + L2 LINE L2 2024 2192 -1122 634 309 192 20 chr10 54147685 54148419 -86168346 + L2 LINE L2 2435 3307 -6 2072 123 0 10 chr10 54151677 54151985 -86164780 - AluSx SINE Alu -7 305 1 32 26 0 0 chr10 54152200 54152239 -86164526 + AT_rich Low_complexity Low_complexity 1 39 0 592 201 60 76 chr10 54154505 54154645 -86162120 + MER20 DNA MER1_type 37 175 -44 195 42 0 0 chr10 54154645 54154669 -86162096 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 592 201 60 76 chr10 54154669 54154712 -86162053 + MER20 DNA MER1_type 175 217 -2 1913 148 62 17 chr10 54155420 54155778 -86160987 + THE1C LTR MaLR 1 374 -1 9143 155 24 23 chr10 54155939 54157582 -86159183 + L1PA6 LINE L1 11 1654 -4492 4074 52 20 7 chr10 54157562 54158117 -86158648 + L1PA6 LINE L1 2694 3255 -2891 * 14504 66 1 0 chr10 54158122 54159852 -86156913 + L1PA6 LINE L1 3417 5155 -999 2405 72 0 25 chr10 54159852 54160171 -86156594 + AluY SINE Alu 1 311 0 14504 66 1 0 chr10 54160171 54161173 -86155592 + L1PA6 LINE L1 5155 6154 0 2225 97 10 0 chr10 54161964 54162254 -86154511 - AluSg SINE Alu -17 293 1 1972 150 30 3 chr10 54162327 54162660 -86154105 + MER2 DNA MER2_type 3 344 0 439 296 125 11 chr10 54163069 54163245 -86153520 + MIR SINE MIR 23 218 -44 21 71 0 0 chr10 54163822 54163864 -86152901 + AT_rich Low_complexity Low_complexity 1 42 0 2551 141 29 12 chr10 54164111 54164530 -86152235 + MSTB LTR MaLR 1 426 0 391 320 128 12 chr10 54164607 54164779 -86151986 - MIR SINE MIR -49 213 22 327 25 0 0 chr10 54165108 54165148 -86151617 + (CA)n Simple_repeat Simple_repeat 2 41 0 1867 218 58 27 chr10 54165159 54165640 -86151125 - MLT1D LTR MaLR -5 500 5 446 327 38 13 chr10 54165856 54166015 -86150750 - MIR SINE MIR -48 214 52 21 57 0 0 chr10 54166812 54166847 -86149918 + AT_rich Low_complexity Low_complexity 1 35 0 239 233 27 27 chr10 54168134 54168207 -86148558 + LTR67 LTR ERVL 466 538 -19 2221 91 0 3 chr10 54169186 54169497 -86147268 + AluY SINE Alu 1 310 0 23 33 0 0 chr10 54169927 54169957 -86146808 + AT_rich Low_complexity Low_complexity 1 30 0 191 306 41 41 chr10 54170091 54170189 -86146576 + L2 LINE L2 1935 2032 -1282 4563 111 19 122 chr10 54170381 54171919 -86144846 + pTR5 LTR ERV1 743 2606 0 224 309 0 49 chr10 54172767 54172848 -86143917 - MER5A DNA MER1_type -70 119 43 235 132 0 0 chr10 54172977 54173015 -86143750 + MER4B LTR ERV1 329 366 -244 * 924 131 28 0 chr10 54173008 54173153 -86143612 + MER4E LTR ERV1 618 766 0 279 0 0 0 chr10 54173531 54173562 -86143203 + (TG)n Simple_repeat Simple_repeat 1 31 0 206 378 72 9 chr10 54174291 54174402 -86142363 - L2 LINE L2 -219 3053 2936 22 56 0 0 chr10 54175250 54175286 -86141479 + AT_rich Low_complexity Low_complexity 1 36 0 2486 81 0 0 chr10 54176566 54176874 -86139891 + AluY SINE Alu 1 308 -3 1749 192 115 10 chr10 54176904 54177321 -86139444 + LOR1b LTR ERV1 1 461 0 401 291 34 8 chr10 54177800 54177917 -86138848 - L2 LINE L2 0 3313 3194 25 0 0 0 chr10 54178084 54178109 -86138656 + AT_rich Low_complexity Low_complexity 1 25 0 867 134 0 35 chr10 54179121 54179263 -86137502 - LOR1a LTR ERV1 0 497 361 * 1626 146 27 27 chr10 54179229 54179555 -86137210 + MSTA LTR MaLR 56 401 -27 7477 33 5 0 chr10 54179565 54180497 -86136268 - L1PA4 LINE L1 -3 6152 5219 437 204 0 21 chr10 54180587 54180680 -86136085 + LTR35 LTR ERV1 1 91 -527 1301 70 0 0 chr10 54180847 54181004 -86135761 + AluY SINE Alu 143 299 -12 651 278 34 28 chr10 54181010 54181304 -86135461 + LTR35 LTR ERV1 231 618 0 825 218 16 21 chr10 54181885 54182073 -86134692 + MER58A DNA MER1_type 6 192 -32 * 1871 243 90 40 chr10 54182069 54182972 -86133793 + L1MC5 LINE L1 6966 7913 -48 21 71 0 0 chr10 54183028 54183070 -86133695 + AT_rich Low_complexity Low_complexity 1 42 0 482 252 39 7 chr10 54185603 54185758 -86131007 - MER103 DNA DNA 0 166 7 654 236 42 55 chr10 54185920 54186157 -86130608 + L2 LINE L2 3080 3313 0 4667 163 32 6 chr10 54187396 54188279 -86128486 - L1MC1 LINE L1 0 6333 5428 1499 241 67 38 chr10 54188884 54189304 -86127461 + MLT1E LTR MaLR 160 591 -2 1950 130 43 0 chr10 54189598 54189897 -86126868 + AluSx SINE Alu 1 312 0 32 0 0 0 chr10 54190291 54190323 -86126442 + AT_rich Low_complexity Low_complexity 1 32 0 182 233 151 14 chr10 54190666 54190739 -86126026 + MIR3 SINE MIR 111 193 -15 21 36 0 0 chr10 54191440 54191468 -86125297 + AT_rich Low_complexity Low_complexity 1 28 0 28 79 0 0 chr10 54191535 54191598 -86125167 + AT_rich Low_complexity Low_complexity 1 63 0 2036 176 67 114 chr10 54191689 54192229 -86124536 - L1MA9 LINE L1 -22 6290 5785 225 0 0 0 chr10 54192229 54192254 -86124511 + (TA)n Simple_repeat Simple_repeat 2 26 0 2036 176 67 114 chr10 54192254 54192373 -86124392 - L1MA9 LINE L1 -527 5785 5662 821 188 6 6 chr10 54192357 54192527 -86124238 + L1M2 LINE L1 5302 5471 -820 * 847 249 35 0 chr10 54192527 54192724 -86124041 + MER70B LTR ERVL 375 578 0 1256 199 19 4 chr10 54192724 54192986 -86123779 - L1MC2 LINE L1 -302 6042 5777 2108 106 3 3 chr10 54193154 54193446 -86123319 - AluSg1 SINE Alu -17 292 1 230 344 91 46 chr10 54194666 54194907 -86121858 + MLT1J LTR MaLR 13 264 -247 335 260 20 123 chr10 54195853 54195999 -86120766 - MLT1J1 LTR MaLR -278 168 38 512 237 0 0 chr10 54197095 54197192 -86119573 - Tigger7 DNA MER2_type -1 2486 2390 1388 181 60 4 chr10 54197199 54197447 -86119318 - Tigger7 DNA MER2_type -2225 262 1 542 226 34 126 chr10 54198212 54198380 -86118385 + MLT1A2 LTR MaLR 158 299 -75 2326 97 3 0 chr10 54198380 54198688 -86118077 + AluY SINE Alu 1 309 -2 542 226 34 126 chr10 54198688 54198758 -86118007 + MLT1A2 LTR MaLR 299 374 0 302 283 19 19 chr10 54198774 54198880 -86117885 + L1MC4 LINE L1 6597 6702 -1340 261 182 0 34 chr10 54198881 54198969 -86117796 + (TA)n Simple_repeat Simple_repeat 2 86 0 207 139 0 0 chr10 54198982 54199018 -86117747 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr10 54199258 54199293 -86117472 + AT_rich Low_complexity Low_complexity 1 35 0 298 319 109 0 chr10 54199646 54199784 -86116981 - MIR SINE MIR -12 250 98 25 31 0 0 chr10 54201317 54201349 -86115416 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr10 54201593 54201620 -86115145 + AT_rich Low_complexity Low_complexity 1 27 0 785 213 0 19 chr10 54201927 54202082 -86114683 - FRAM SINE Alu -30 146 1 789 312 128 22 chr10 54202994 54203485 -86113280 + L2 LINE L2 1973 2515 -799 217 315 49 60 chr10 54203580 54203764 -86113001 + L2 LINE L2 2709 2890 -424 428 262 167 52 chr10 54203850 54204060 -86112705 + L2 LINE L2 3078 3311 -2 260 225 22 39 chr10 54204060 54204242 -86112523 + (TTTA)n Simple_repeat Simple_repeat 1 179 0 53 0 0 0 chr10 54204242 54204295 -86112470 + AT_rich Low_complexity Low_complexity 1 53 0 1941 128 0 10 chr10 54204821 54205118 -86111647 - AluSg SINE Alu -16 294 1 22 0 0 0 chr10 54205126 54205148 -86111617 + AT_rich Low_complexity Low_complexity 1 22 0 208 206 0 29 chr10 54206068 54206136 -86110629 + CT-rich Low_complexity Low_complexity 1 66 0 34 99 0 0 chr10 54206479 54206590 -86110175 + AT_rich Low_complexity Low_complexity 1 111 0 1307 206 53 32 chr10 54206590 54206695 -86110070 - AluJo SINE Alu -25 287 186 2482 128 3 3 chr10 54206695 54207070 -86109695 + THE1C LTR MaLR 1 375 0 1307 206 53 32 chr10 54207070 54207245 -86109520 - AluJo SINE Alu -126 186 1 23 97 0 0 chr10 54207360 54207432 -86109333 + AT_rich Low_complexity Low_complexity 1 72 0 17916 97 13 6 chr10 54207565 54210099 -86106666 + L1PA5 LINE L1 1 2553 -3593 17007 63 0 1 chr10 54210108 54213127 -86103638 + L1PA5 LINE L1 3137 6152 -2 1775 167 11 0 chr10 54213703 54213990 -86102775 - AluSx SINE Alu -22 290 1 29 94 0 0 chr10 54214087 54214172 -86102593 + AT_rich Low_complexity Low_complexity 1 85 0 316 324 72 43 chr10 54214232 54214439 -86102326 + L2 LINE L2 1932 2144 -1170 5575 166 21 7 chr10 54214447 54215910 -86100855 - L1PA16 LINE L1 0 6166 4692 198 0 0 0 chr10 54215957 54215979 -86100786 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 191 291 151 0 chr10 54216094 54216180 -86100585 + L2 LINE L2 2874 2972 -342 2822 158 9 2 chr10 54216441 54216899 -86099866 + LOR1a LTR ERV1 13 473 -24 1391 145 41 0 chr10 54216899 54217120 -86099645 + MER30 DNA MER1_type 1 230 0 464 118 0 0 chr10 54217191 54217259 -86099506 - THE1C LTR MaLR -307 68 1 9604 128 39 6 chr10 54217259 54218789 -86097976 - THE1C-int LTR MaLR 0 1580 1 2344 137 13 5 chr10 54218789 54219161 -86097604 - THE1C LTR MaLR 0 375 1 2147 118 0 7 chr10 54219615 54219920 -86096845 + AluSx SINE Alu 1 303 -9 7578 30 0 0 chr10 54221069 54222513 -86094252 + L1PA4 LINE L1 4712 6155 0 255 31 0 0 chr10 54222899 54222931 -86093834 + (TG)n Simple_repeat Simple_repeat 2 33 0 2365 90 0 3 chr10 54223820 54224132 -86092633 - AluY SINE Alu 0 311 1 261 271 111 60 chr10 54224564 54224763 -86092002 + MLT1H LTR MaLR 123 331 -218 245 300 100 0 chr10 54225582 54225672 -86091093 - MIR SINE MIR -4 258 160 490 193 46 0 chr10 54225672 54225781 -86090984 - L1MB1 LINE L1 0 6168 6055 3660 166 28 36 chr10 54225795 54226548 -86090217 + L1MB1 LINE L1 5297 6043 -125 524 262 7 28 chr10 54226548 54226693 -86090072 - MIR SINE MIR -108 154 13 532 338 131 28 chr10 54226695 54227168 -86089597 + HAL1b LINE L1 221 742 -606 22 0 0 0 chr10 54227201 54227223 -86089542 + AT_rich Low_complexity Low_complexity 1 22 0 1350 209 64 32 chr10 54228539 54228883 -86087882 - MER57B LTR ERV1 0 434 80 248 139 74 8 chr10 54230183 54230305 -86086460 + (TA)n Simple_repeat Simple_repeat 1 130 0 7041 132 86 116 chr10 54230331 54232080 -86084685 + pTR5 LTR ERV1 741 2437 -1 362 285 35 35 chr10 54233009 54233153 -86083612 - L2 LINE L2 0 3313 3170 193 394 15 0 chr10 54234082 54234148 -86082617 + L2 LINE L2 3115 3181 -91 22 0 0 0 chr10 54234716 54234738 -86082027 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 54234806 54234828 -86081937 + AT_rich Low_complexity Low_complexity 1 22 0 236 278 9 113 chr10 54236134 54236249 -86080516 - L2 LINE L2 -5 3267 3165 28 0 0 0 chr10 54236449 54236477 -86080288 + AT_rich Low_complexity Low_complexity 1 28 0 2200 106 0 3 chr10 54238468 54238771 -86077994 + AluSx SINE Alu 1 302 -10 13645 138 49 6 chr10 54239219 54241744 -86075021 + L1MA3 LINE L1 1241 3876 -3689 186 189 0 0 chr10 54241744 54241781 -86074984 + (TA)n Simple_repeat Simple_repeat 1 37 0 261 204 0 0 chr10 54241783 54241832 -86074933 - L1MC4 LINE L1 -1338 6704 6656 * 1950 253 15 4 chr10 54241820 54242341 -86074424 + L1MA3 LINE L1 3866 4392 -3173 226 289 31 0 chr10 54242551 54242648 -86074117 + LTR30 LTR ERV1 544 643 -79 527 174 11 11 chr10 54242654 54242746 -86074019 + LTR12 LTR ERV1 486 577 -137 10940 176 14 19 chr10 54242747 54244067 -86072698 + L1MA3 LINE L1 4386 5712 -2012 405 0 0 0 chr10 54244067 54244112 -86072653 + (CA)n Simple_repeat Simple_repeat 2 46 0 10940 176 14 19 chr10 54244112 54245690 -86071075 + L1MA3 LINE L1 5712 7267 -457 16832 232 45 20 chr10 54249183 54255618 -86061147 + L1PA16 LINE L1 1 6682 -922 195 42 0 0 chr10 54255618 54255642 -86061123 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 16832 232 45 20 chr10 54255642 54256589 -86060176 + L1PA16 LINE L1 6682 7604 0 2134 128 0 3 chr10 54256706 54257010 -86059755 - AluSq SINE Alu -10 303 1 2313 174 16 20 chr10 54257044 54257491 -86059274 + L1PA16 LINE L1 5714 6158 -8 180 0 0 0 chr10 54257968 54257988 -86058777 + (TAAAAA)n Simple_repeat Simple_repeat 3 22 0 229 329 35 0 chr10 54259336 54259421 -86057344 - MIR SINE MIR -126 136 49 237 230 0 0 chr10 54260293 54260367 -86056398 + GA-rich Low_complexity Low_complexity 1 74 0 24 0 0 0 chr10 54260514 54260538 -86056227 + AT_rich Low_complexity Low_complexity 1 24 0 356 358 47 46 chr10 54261008 54261525 -86055240 + L2 LINE L2 2616 3216 -56 242 343 30 20 chr10 54261817 54261916 -86054849 + MER5A DNA MER1_type 7 106 -83 23 54 0 0 chr10 54262313 54262350 -86054415 + AT_rich Low_complexity Low_complexity 1 37 0 392 179 63 0 chr10 54262421 54262516 -86054249 - MER53 DNA DNA -84 105 5 25 0 0 0 chr10 54263334 54263359 -86053406 + AT_rich Low_complexity Low_complexity 1 25 0 319 263 40 10 chr10 54263426 54263525 -86053240 - MIR SINE MIR -56 206 105 243 328 16 0 chr10 54263549 54263613 -86053152 + L2 LINE L2 3207 3271 -1 1243 267 111 50 chr10 54264892 54265188 -86051577 - MLT1E2 LTR MaLR -3 623 284 2350 84 0 0 chr10 54265188 54265485 -86051280 - AluSg SINE Alu -13 297 1 1243 267 111 50 chr10 54265485 54265683 -86051082 - MLT1E2 LTR MaLR -342 284 99 1626 185 3 3 chr10 54265761 54266058 -86050707 - AluJb SINE Alu -15 297 1 508 88 0 0 chr10 54266301 54266369 -86050396 - L1PA3 LINE L1 -2263 3883 3816 12434 32 5 0 chr10 54266369 54268640 -86048125 + L1PA3 LINE L1 3875 6155 0 255 31 0 0 chr10 54269026 54269058 -86047707 + (TG)n Simple_repeat Simple_repeat 2 33 0 2365 90 0 3 chr10 54269944 54270256 -86046509 - AluY SINE Alu 0 311 1 261 271 111 60 chr10 54270688 54270887 -86045878 + MLT1H LTR MaLR 123 331 -218 245 300 100 0 chr10 54271706 54271796 -86044969 - MIR SINE MIR -4 258 160 490 193 46 0 chr10 54271796 54271905 -86044860 - L1MB1 LINE L1 0 6168 6055 1202 188 23 62 chr10 54271919 54272227 -86044538 + L1M3 LINE L1 5297 5592 -576 7211 18 1 0 chr10 54272345 54273181 -86043584 + L1PA3 LINE L1 5319 6155 0 405 359 26 35 chr10 54275060 54275372 -86041393 - MLT1I LTR MaLR -37 372 64 30 0 0 0 chr10 54276259 54276289 -86040476 + AT_rich Low_complexity Low_complexity 1 30 0 1543 147 65 84 chr10 54276968 54277350 -86039415 - THE1C LTR MaLR 0 375 1 317 271 131 33 chr10 54277466 54277680 -86039085 - MER106A DNA MER1_type -1 235 1 12681 154 16 45 chr10 54279460 54281950 -86034815 + Tigger1 DNA MER2_type 1 2418 0 897 330 29 6 chr10 54282553 54282899 -86033866 - LTR16A LTR ERVL -2 448 95 216 348 96 30 chr10 54283302 54283437 -86033328 - MIR SINE MIR -71 191 48 2141 117 35 44 chr10 54284416 54284783 -86031982 + THE1B LTR MaLR 1 364 0 181 341 16 49 chr10 54285820 54285943 -86030822 - L2 LINE L2 -96 3217 3099 214 318 87 80 chr10 54286082 54286346 -86030419 + L3 LINE CR1 339 604 -973 459 312 43 32 chr10 54286388 54286574 -86030191 - MIR SINE MIR -34 228 41 * 955 256 77 65 chr10 54286564 54287135 -86029630 - L2 LINE L2 -139 3174 2579 1706 172 27 7 chr10 54287622 54287919 -86028846 - AluJb SINE Alu -7 305 3 727 271 131 67 chr10 54289667 54291012 -86025753 + L1ME3A LINE L1 4672 6116 -48 270 111 14 83 chr10 54291630 54291702 -86025063 - L1PA16 LINE L1 0 6166 6100 5464 199 32 14 chr10 54291957 54294187 -86022578 - L1PA16 LINE L1 0 6166 3896 2047 126 3 3 chr10 54294187 54294481 -86022284 - AluSg SINE Alu -16 294 1 2605 251 31 7 chr10 54294497 54295173 -86021592 - L1 LINE L1 -2366 3780 3080 207 0 0 0 chr10 54295173 54295196 -86021569 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2605 251 31 7 chr10 54295196 54295328 -86021437 - L1 LINE L1 -3066 3080 2953 2468 128 5 8 chr10 54295354 54295730 -86021035 + THE1C LTR MaLR 1 375 0 8824 137 42 43 chr10 54295730 54297311 -86019454 + THE1C-int LTR MaLR 1 1580 0 2388 131 25 3 chr10 54297311 54297678 -86019087 + THE1C LTR MaLR 1 375 0 507 362 107 16 chr10 54298390 54298763 -86018002 - L2 LINE L2 -647 2667 2261 22 56 0 0 chr10 54299202 54299238 -86017527 + AT_rich Low_complexity Low_complexity 1 36 0 2116 118 42 121 chr10 54300673 54300867 -86015898 - L1MA4A LINE L1 -5 6298 6090 2295 126 31 8 chr10 54300867 54301223 -86015542 - THE1B LTR MaLR 0 364 1 9856 116 33 40 chr10 54301225 54302815 -86013950 - THE1B-int LTR MaLR -2 1578 1 2323 137 17 0 chr10 54302815 54303172 -86013593 - THE1B LTR MaLR 0 364 2 2116 118 42 121 chr10 54303172 54303245 -86013520 - L1MA4A LINE L1 -213 6090 6013 2204 125 3 3 chr10 54303245 54303556 -86013209 - AluSp SINE Alu -2 311 1 2116 118 42 121 chr10 54303556 54303802 -86012963 - L1MA4A LINE L1 -290 6013 5821 624 260 6 61 chr10 54304108 54304289 -86012476 - MER5A DNA MER1_type -16 173 3 270 238 0 0 chr10 54304416 54304479 -86012286 + MIR SINE MIR 200 262 0 25 51 0 0 chr10 54305013 54305052 -86011713 + AT_rich Low_complexity Low_complexity 1 39 0 510 332 31 22 chr10 54305052 54305275 -86011490 - MIR SINE MIR -17 245 21 2114 124 6 13 chr10 54306505 54306820 -86009945 + AluSq SINE Alu 1 313 0 351 310 181 0 chr10 54307621 54307776 -86008989 + L2 LINE L2 2574 2756 -558 5174 207 124 20 chr10 54308109 54309621 -86007144 - MER52A LTR ERV1 0 1755 1 554 315 47 13 chr10 54309812 54310047 -86006718 + LTR16C LTR ERVL 249 491 0 823 115 0 0 chr10 54311725 54311838 -86004927 + AluSc SINE Alu 184 296 -13 1693 183 153 17 chr10 54311838 54312242 -86004523 + MER50 LTR ERV1 253 711 -23 273 207 0 39 chr10 54312243 54312348 -86004417 - L1ME LINE L1 -722 5432 5333 1088 101 0 57 chr10 54312924 54313082 -86003683 - AluSq/x SINE Alu -162 150 2 1557 147 15 4 chr10 54313082 54313347 -86003418 - L1MC1 LINE L1 -505 5828 5561 577 152 34 0 chr10 54313452 54313565 -86003200 + L1MC/D LINE L1 5485 5605 -578 22 0 0 0 chr10 54313662 54313684 -86003081 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 54313853 54313876 -86002889 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 54314274 54314304 -86002461 + AT_rich Low_complexity Low_complexity 1 30 0 679 93 0 0 chr10 54317120 54317217 -85999548 + AluY SINE Alu 201 297 -14 22 56 0 0 chr10 54317217 54317253 -85999512 + AT_rich Low_complexity Low_complexity 1 36 0 2276 110 0 0 chr10 54317788 54318097 -85998668 + AluSg1 SINE Alu 1 309 0 1349 226 37 92 chr10 54318919 54319406 -85997359 - L1 LINE L1 -1628 4518 4059 188 273 0 0 chr10 54320069 54320113 -85996652 - MIR SINE MIR -75 133 90 1798 222 2 16 chr10 54320532 54320956 -85995809 - L1 LINE L1 -3113 3033 2616 1973 136 4 0 chr10 54320976 54321255 -85995510 - AluY SINE Alu -31 280 1 3695 182 9 39 chr10 54321276 54322074 -85994691 + L1MB3 LINE L1 5298 6071 -112 281 250 26 20 chr10 54322775 54322927 -85993838 + (TA)n Simple_repeat Simple_repeat 2 154 0 201 74 0 0 chr10 54322955 54322982 -85993783 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1239 239 9 54 chr10 54323523 54324075 -85992690 - L1 LINE L1 -3173 4392 3866 249 250 0 33 chr10 54324080 54324172 -85992593 - L1MC4 LINE L1 -1340 6702 6614 230 269 0 32 chr10 54324091 54324184 -85992581 + L1MC4 LINE L1 6614 6703 -1339 * 6937 129 32 13 chr10 54324183 54325642 -85991123 - L1 LINE L1 -3689 3876 2389 490 311 95 54 chr10 54327345 54327841 -85988924 + L1M4 LINE L1 2 517 -6025 3573 215 27 48 chr10 54327917 54329320 -85987445 + L1MB5 LINE L1 4793 6167 -7 198 91 0 0 chr10 54330385 54330418 -85986347 + (T)n Simple_repeat Simple_repeat 1 33 0 21 36 0 0 chr10 54330798 54330826 -85985939 + AT_rich Low_complexity Low_complexity 1 28 0 1527 232 51 24 chr10 54330826 54331278 -85985487 + L1ME3A LINE L1 5679 6142 -28 24 32 0 0 chr10 54332320 54332351 -85984414 + AT_rich Low_complexity Low_complexity 1 31 0 1120 162 0 0 chr10 54332622 54332795 -85983970 - AluSg/x SINE Alu -2 310 138 581 143 0 22 chr10 54332933 54333024 -85983741 - AluS SINE Alu -223 89 1 1545 169 33 33 chr10 54333100 54333401 -85983364 - AluJo SINE Alu 0 312 12 243 250 4 0 chr10 54333735 54333814 -85982951 - L1MC/D LINE L1 -677 5667 5587 21 71 0 0 chr10 54334480 54334522 -85982243 + AT_rich Low_complexity Low_complexity 1 42 0 254 374 55 29 chr10 54335129 54335367 -85981398 + MIR SINE MIR 12 255 -7 2091 145 75 20 chr10 54335728 54336073 -85980692 + THE1B LTR MaLR 1 364 0 641 246 59 142 chr10 54336312 54336405 -85980360 + L1M4b LINE L1 11 110 -6749 1534 191 3 31 chr10 54336405 54336699 -85980066 + AluJb SINE Alu 1 286 -26 641 246 59 142 chr10 54336699 54337027 -85979738 + L1M4b LINE L1 110 397 -6462 17575 86 19 18 chr10 54337036 54339276 -85977489 - HERVL LTR ERVL -3073 2581 336 2410 87 0 3 chr10 54339276 54339588 -85977177 + AluY SINE Alu 1 311 0 17575 86 19 18 chr10 54339588 54339718 -85977047 - HERVL LTR ERVL -5318 336 208 504 178 11 0 chr10 54339875 54339965 -85976800 + L1MB5 LINE L1 6077 6167 -7 809 109 0 34 chr10 54340110 54340229 -85976536 + AluY SINE Alu 1 115 -196 1137 96 0 0 chr10 54340250 54340396 -85976369 - AluSg/x SINE Alu -10 302 157 233 207 17 17 chr10 54340398 54340456 -85976309 + MIR SINE MIR 89 146 -116 1445 128 0 0 chr10 54340457 54340668 -85976097 + AluY SINE Alu 100 310 -1 661 173 10 0 chr10 54340672 54340776 -85975989 + FLAM_A SINE Alu 19 123 -19 342 225 63 27 chr10 54341182 54341293 -85975472 - L2 LINE L2 -681 2633 2519 28 71 0 0 chr10 54341306 54341362 -85975403 + AT_rich Low_complexity Low_complexity 1 56 0 2723 143 33 2 chr10 54342210 54342629 -85974136 - MSTB1 LTR MaLR 0 432 1 3536 230 48 15 chr10 54343306 54343901 -85972864 - L1MB8 LINE L1 0 6178 5604 2462 157 34 7 chr10 54343901 54344314 -85972451 + MSTA LTR MaLR 5 428 0 3536 230 48 15 chr10 54344314 54345093 -85971672 - L1MB8 LINE L1 -574 5604 4757 996 129 7 0 chr10 54346529 54346669 -85970096 + AluSq/x SINE Alu 1 141 -171 926 273 114 86 chr10 54346796 54347434 -85969331 + L2 LINE L2 2046 2701 -613 22 0 0 0 chr10 54348128 54348150 -85968615 + AT_rich Low_complexity Low_complexity 1 22 0 221 321 25 0 chr10 54348704 54348785 -85967980 - MIR SINE MIR -24 238 156 194 238 48 0 chr10 54349099 54349141 -85967624 + MIR SINE MIR 29 72 -190 1079 279 89 30 chr10 54349200 54349637 -85967128 - L2 LINE L2 0 3313 2851 36 0 0 0 chr10 54349785 54349821 -85966944 + AT_rich Low_complexity Low_complexity 1 36 0 32 26 0 0 chr10 54350330 54350369 -85966396 + AT_rich Low_complexity Low_complexity 1 39 0 315 279 44 7 chr10 54350836 54350972 -85965793 - MIR SINE MIR -44 218 78 553 311 234 18 chr10 54350991 54351329 -85965436 + L2 LINE L2 263 673 -2641 1163 191 82 54 chr10 54351395 54351689 -85965076 - MLT1A1 LTR MaLR -63 302 1 638 354 152 11 chr10 54351689 54352515 -85964250 + L2 LINE L2 2315 3257 -56 387 0 0 0 chr10 54353046 54353089 -85963676 + (TG)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr10 54353193 54353218 -85963547 + AT_rich Low_complexity Low_complexity 1 25 0 2235 100 0 0 chr10 54354074 54354363 -85962402 + AluSq SINE Alu 1 289 -24 361 111 0 80 chr10 54354764 54354844 -85961921 - MLT2A2 LTR ERVL 0 453 397 237 106 0 0 chr10 54354836 54354883 -85961882 - LTR66 LTR ERVL -169 441 395 * 200 167 0 0 chr10 54354884 54354914 -85961851 + (CA)n Simple_repeat Simple_repeat 2 31 0 2967 78 78 0 chr10 54354914 54355310 -85961455 - MLT2A2 LTR ERVL -26 427 1 2227 225 42 6 chr10 54355311 54355857 -85960908 + L1MB8 LINE L1 5612 6177 -1 314 284 65 32 chr10 54356298 54356453 -85960312 + L1 LINE L1 4886 5045 -1101 1058 217 12 65 chr10 54357685 54358086 -85958679 + L1M1 LINE L1 90 469 -7096 299 374 0 0 chr10 54358086 54358265 -85958500 + C-rich Low_complexity Low_complexity 1 179 0 840 101 47 47 chr10 54358761 54358909 -85957856 - AluSq/x SINE Alu -165 148 1 317 121 103 0 chr10 54358942 54359000 -85957765 + AluJ/FLAM SINE Alu 1 64 -238 3853 58 0 14 chr10 54360013 54360513 -85956252 - L1P LINE L1 -5653 493 1 234 286 0 13 chr10 54360891 54360968 -85955797 + CT-rich Low_complexity Low_complexity 2 77 0 198 231 26 90 chr10 54361905 54361983 -85954782 - L2 LINE L2 -11 3302 3230 6329 128 28 10 chr10 54362287 54363454 -85953311 + LOR1-int LTR ERV1 3306 4530 -3590 416 208 20 20 chr10 54364006 54364107 -85952658 + LTR16B LTR ERVL 364 464 0 190 267 187 47 chr10 54365287 54365437 -85951328 - MIR3 SINE MIR -6 202 32 25 0 0 0 chr10 54366291 54366316 -85950449 + AT_rich Low_complexity Low_complexity 1 25 0 387 0 0 0 chr10 54366420 54366463 -85950302 + (CA)n Simple_repeat Simple_repeat 2 44 0 557 359 106 8 chr10 54366990 54367377 -85949388 - L2 LINE L2 -56 3257 2833 1347 222 29 32 chr10 54367905 54368499 -85948266 + MER52A LTR ERV1 1082 1755 0 334 180 144 54 chr10 54369859 54369970 -85946795 - MIR SINE MIR -109 153 33 260 362 164 14 chr10 54370478 54370765 -85946000 + L3 LINE CR1 428 757 -820 345 351 39 34 chr10 54370821 54371026 -85945739 + L3 LINE CR1 1273 1478 -99 246 132 29 15 chr10 54371201 54371269 -85945496 + (TA)n Simple_repeat Simple_repeat 2 70 0 1859 106 7 66 chr10 54373146 54373470 -85943295 + AluSx SINE Alu 1 306 0 548 210 16 16 chr10 54373522 54373646 -85943119 - MER20 DNA MER1_type 0 219 96 1173 186 42 0 chr10 54373781 54373996 -85942769 - LOR1b-int LTR ERV1 -7896 224 1 2416 171 57 7 chr10 54373996 54374435 -85942330 - LOR1b LTR ERV1 0 461 1 648 100 11 0 chr10 54374435 54374525 -85942240 - LOR1b-int LTR ERV1 0 8120 8030 * 1423 176 44 7 chr10 54374524 54374797 -85941968 - LOR1-int LTR ERV1 -2056 6064 5782 * 2044 143 72 38 chr10 54374777 54375247 -85941518 - LOR1-int LTR ERV1 -2597 5523 5038 521 174 216 16 chr10 54375729 54375919 -85940846 + MER5C DNA MER1_type 2 229 -95 2988 232 22 21 chr10 54376030 54376706 -85940059 - MER52A LTR ERV1 0 1755 1079 550 319 86 37 chr10 54377476 54377859 -85938906 - MLT1K LTR MaLR -4 584 183 461 313 28 28 chr10 54378037 54378216 -85938549 - MLT1I LTR MaLR -1 408 230 306 0 0 0 chr10 54379745 54379779 -85936986 + (TG)n Simple_repeat Simple_repeat 2 35 0 430 213 82 127 chr10 54380675 54380919 -85935846 + L1ME3A LINE L1 5934 6166 -4 261 0 0 0 chr10 54382258 54382287 -85934478 + (TG)n Simple_repeat Simple_repeat 2 30 0 788 113 7 71 chr10 54382611 54382752 -85934013 - FLAM_C SINE Alu -1 132 1 1337 107 0 21 chr10 54384682 54384904 -85931861 + AluSg/x SINE Alu 98 315 0 333 220 110 30 chr10 54385305 54385405 -85931360 + MIR SINE MIR 58 165 -97 400 298 0 15 chr10 54385627 54385758 -85931007 + L2 LINE L2 2934 3062 -210 262 220 0 51 chr10 54385863 54385922 -85930843 + L2 LINE L2 3217 3272 0 1958 153 0 17 chr10 54386014 54386309 -85930456 + AluSx SINE Alu 1 290 -22 22 225 0 0 chr10 54386353 54386393 -85930372 + AT_rich Low_complexity Low_complexity 1 40 0 382 158 33 55 chr10 54386393 54386624 -85930141 + (TTATA)n Simple_repeat Simple_repeat 1 225 0 48 20 0 0 chr10 54386624 54386674 -85930091 + AT_rich Low_complexity Low_complexity 1 50 0 1036 179 12 0 chr10 54386859 54387032 -85929733 - FAM SINE Alu 0 175 1 181 280 161 0 chr10 54387044 54387137 -85929628 + L2 LINE L2 2678 2785 -529 308 311 76 62 chr10 54387332 54387557 -85929208 + L2 LINE L2 3025 3252 -20 1478 208 53 28 chr10 54388185 54388541 -85928224 + MLT1A1 LTR MaLR 1 365 0 1066 282 27 81 chr10 54388681 54389164 -85927601 + LTR16A1 LTR ERVL 1 457 0 1535 165 67 0 chr10 54390137 54390434 -85926331 - L1MB3 LINE L1 -3 6180 5864 4288 160 33 5 chr10 54390462 54391211 -85925554 - L1PA16 LINE L1 0 6166 5397 28 86 0 0 chr10 54392002 54392072 -85924693 + GC_rich Low_complexity Low_complexity 1 70 0 631 226 7 78 chr10 54392415 54392711 -85924054 + AluY SINE Alu 2 276 -35 268 81 0 0 chr10 54392944 54392981 -85923784 - L1PA8 LINE L1 -212 5960 5924 * 4716 261 16 35 chr10 54392978 54394737 -85922028 + L1P LINE L1 1720 3446 -2700 2021 177 45 26 chr10 54396111 54396534 -85920231 - MER52A LTR ERV1 -581 1174 744 1590 215 44 20 chr10 54396538 54396919 -85919846 + L1P LINE L1 4595 4991 -1155 2250 99 0 0 chr10 54396919 54397238 -85919527 + AluY SINE Alu 1 319 0 1590 215 44 20 chr10 54397238 54397307 -85919458 + L1P LINE L1 4991 5057 -1089 1127 194 31 0 chr10 54397320 54397516 -85919249 + L1PA15-16 LINE L1 1 202 -6647 644 170 37 15 chr10 54397511 54397646 -85919119 + L1PA15-16 LINE L1 1661 1798 -5051 * 5343 127 9 3 chr10 54397788 54398560 -85918205 + THE1B-int LTR MaLR 804 1580 0 2336 126 31 8 chr10 54398560 54398916 -85917849 + THE1B LTR MaLR 1 364 0 1038 153 63 0 chr10 54398919 54399109 -85917656 + L1MA4A LINE L1 6097 6298 -5 1801 101 8 12 chr10 54399372 54399620 -85917145 - AluSg SINE Alu -62 248 2 360 315 85 15 chr10 54399620 54399750 -85917015 - MLT1H1 LTR MaLR -317 238 100 235 257 50 79 chr10 54399877 54399978 -85916787 - MLT1H1 LTR MaLR -444 98 1 677 165 8 0 chr10 54400354 54400481 -85916284 - L1MB8 LINE L1 -2 6176 6049 1342 139 0 5 chr10 54400481 54400682 -85916083 - AluJb SINE Alu -17 295 96 1007 117 0 0 chr10 54401163 54401300 -85915465 + AluJb SINE Alu 163 299 -13 197 268 61 0 chr10 54401305 54401387 -85915378 - L2 LINE L2 -360 2912 2826 451 312 121 54 chr10 54401885 54402199 -85914566 + L2 LINE L2 2924 3258 -14 192 264 0 19 chr10 54403045 54403098 -85913667 + MIR SINE MIR 156 207 -55 202 135 0 27 chr10 54404142 54404179 -85912586 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 594 322 4 15 chr10 54404179 54404614 -85912151 + CT-rich Low_complexity Low_complexity 1 430 0 449 333 6 22 chr10 54404626 54404806 -85911959 + C-rich Low_complexity Low_complexity 4 180 0 302 305 29 23 chr10 54404815 54404989 -85911776 + CT-rich Low_complexity Low_complexity 3 177 0 195 390 0 0 chr10 54404995 54405072 -85911693 + C-rich Low_complexity Low_complexity 1 77 0 202 244 0 0 chr10 54405195 54405240 -85911525 + MIR SINE MIR 109 153 -109 356 297 150 18 chr10 54405250 54405523 -85911242 - MLT1J1 LTR MaLR -1 445 137 1971 60 36 0 chr10 54406670 54406921 -85909844 - L1PA7 LINE L1 0 6154 5895 4774 50 2 2 chr10 54406921 54407506 -85909259 + L1PA7 LINE L1 5305 5889 -265 600 200 0 0 chr10 54407690 54407790 -85908975 - AluJo SINE Alu -79 233 134 2340 84 7 0 chr10 54407790 54408089 -85908676 - AluSp SINE Alu -11 302 2 949 10 0 0 chr10 54408117 54408219 -85908546 + AluY SINE Alu 195 296 -15 740 202 0 0 chr10 54408219 54408343 -85908422 - AluJo SINE Alu -187 125 2 1618 184 41 10 chr10 54408348 54408642 -85908123 - AluJb SINE Alu -8 304 2 654 137 6 80 chr10 54408849 54409024 -85907741 - AluSc SINE Alu -16 293 132 2422 129 17 0 chr10 54411191 54411548 -85905217 + THE1B LTR MaLR 2 364 0 1724 146 4 0 chr10 54412668 54412928 -85903837 - AluSx SINE Alu -14 298 38 24 32 0 0 chr10 54413082 54413113 -85903652 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr10 54413190 54413212 -85903553 + AT_rich Low_complexity Low_complexity 1 22 0 803 213 0 6 chr10 54414359 54414519 -85902246 + AluJb SINE Alu 37 195 -117 930 302 56 40 chr10 54414619 54415049 -85901716 + MLT1K LTR MaLR 152 588 0 810 180 0 0 chr10 54415098 54415226 -85901539 + FLAM_A SINE Alu 2 129 -4 34 0 0 0 chr10 54415259 54415293 -85901472 + AT_rich Low_complexity Low_complexity 1 34 0 298 245 137 7 chr10 54415674 54415813 -85900952 - MIR SINE MIR -58 204 48 23 68 0 0 chr10 54415878 54415922 -85900843 + AT_rich Low_complexity Low_complexity 1 44 0 401 253 108 62 chr10 54416975 54417169 -85899596 - L1MEc LINE L1 -4483 2028 1741 287 205 39 154 chr10 54417197 54417280 -85899485 - L1MEc LINE L1 -4765 1661 1603 2159 154 6 14 chr10 54417280 54417631 -85899134 + MER7A DNA MER2_type 1 346 0 287 205 39 154 chr10 54417631 54417703 -85899062 - L1MEc LINE L1 -4823 1603 1524 363 182 0 182 chr10 54417704 54417791 -85898974 + MLT2B2 LTR ERVL 408 465 -50 446 0 19 0 chr10 54417791 54417845 -85898920 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 363 182 0 182 chr10 54417845 54417889 -85898876 + MLT2B2 LTR ERVL 465 515 0 872 290 26 31 chr10 54417889 54418241 -85898524 - L1MEc LINE L1 -5801 806 457 2331 167 64 7 chr10 54418452 54418752 -85898013 + L1M1 LINE L1 606 940 -6625 249 33 0 0 chr10 54418752 54418782 -85897983 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 2331 167 64 7 chr10 54418782 54418917 -85897848 + L1M1 LINE L1 940 1066 -6499 1141 198 20 10 chr10 54418911 54419226 -85897539 + L1MA3 LINE L1 4904 5801 -367 * 2504 138 43 47 chr10 54419254 54419789 -85896976 + L1MA3 LINE L1 5773 6305 0 284 256 67 72 chr10 54420056 54420236 -85896529 + L1MC4 LINE L1 6475 6653 -1389 267 93 0 0 chr10 54420973 54421016 -85895749 + (TG)n Simple_repeat Simple_repeat 2 44 0 985 114 13 7 chr10 54421737 54421886 -85894879 + AluSg/x SINE Alu 160 309 -3 370 200 37 172 chr10 54422069 54422093 -85894672 + MIR SINE MIR 76 102 -160 2012 140 3 13 chr10 54422093 54422400 -85894365 - AluJb SINE Alu -8 304 1 370 200 37 172 chr10 54422400 54422496 -85894269 + MIR SINE MIR 102 209 -53 1235 105 34 94 chr10 54422496 54422709 -85894056 - L1MA8 LINE L1 -2 6289 6094 1468 158 146 0 chr10 54422709 54422840 -85893925 - AluSx SINE Alu -21 291 180 414 0 0 0 chr10 54422840 54422886 -85893879 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1468 158 146 0 chr10 54422886 54423008 -85893757 - AluSx SINE Alu -132 180 1 1235 105 34 94 chr10 54423008 54423061 -85893704 - L1MA8 LINE L1 -197 6094 6039 370 200 37 172 chr10 54423061 54423154 -85893611 + MIR SINE MIR 209 261 -1 306 0 0 0 chr10 54423680 54423714 -85893051 + (CA)n Simple_repeat Simple_repeat 2 35 0 2111 82 3 21 chr10 54423820 54424102 -85892663 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 54424106 54424153 -85892612 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 895 269 179 8 chr10 54424373 54424759 -85892006 - Tigger8 DNA MER2_type -53 613 162 1241 216 0 4 chr10 54425341 54425577 -85891188 - AluJo SINE Alu -77 235 1 21 0 0 0 chr10 54425643 54425664 -85891101 + AT_rich Low_complexity Low_complexity 1 21 0 2243 103 10 0 chr10 54425674 54425975 -85890790 - AluSp SINE Alu -9 304 1 2266 102 0 10 chr10 54425975 54426280 -85890485 - AluSx SINE Alu -10 302 1 2551 57 17 0 chr10 54427396 54427696 -85889069 - AluY SINE Alu -6 305 1 1948 138 3 3 chr10 54428302 54428585 -85888180 + AluSx SINE Alu 14 296 -16 1735 169 30 24 chr10 54428606 54428901 -85887864 + AluJb SINE Alu 1 297 -15 375 154 0 0 chr10 54429856 54429921 -85886844 + (CA)n Simple_repeat Simple_repeat 2 66 0 2114 115 0 17 chr10 54430036 54430350 -85886415 - AluSx SINE Alu 0 309 1 1780 158 116 35 chr10 54430350 54430780 -85885985 - L1MC4 LINE L1 -441 7601 7137 418 277 89 30 chr10 54430946 54431148 -85885617 + MIR SINE MIR 48 261 -1 207 280 0 0 chr10 54431314 54431364 -85885401 + CT-rich Low_complexity Low_complexity 3 52 0 341 99 0 62 chr10 54431366 54431447 -85885318 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 2233 107 7 3 chr10 54431479 54431778 -85884987 + AluSp SINE Alu 1 300 -13 246 167 13 154 chr10 54431787 54431824 -85884941 - L2 LINE L2 -45 3268 3246 2173 118 14 0 chr10 54431824 54432113 -85884652 + AluSx SINE Alu 1 293 -19 246 167 13 154 chr10 54432113 54432153 -85884612 - L2 LINE L2 -67 3246 3202 632 115 29 29 chr10 54432153 54432257 -85884508 + AluSq/x SINE Alu 35 138 -175 1694 146 4 11 chr10 54432257 54432517 -85884248 + AluSc SINE Alu 1 258 -51 25 31 0 0 chr10 54432637 54432669 -85884096 + GC_rich Low_complexity Low_complexity 1 32 0 1792 152 10 17 chr10 54433581 54433878 -85882887 + AluJo SINE Alu 1 295 -17 275 214 36 48 chr10 54434016 54434100 -85882665 - L3 LINE CR1 -5 1572 1490 325 229 42 42 chr10 54434436 54434554 -85882211 - FLAM_A SINE Alu -15 118 1 290 305 175 0 chr10 54434670 54434824 -85881941 - MIR SINE MIR -50 212 32 353 320 63 31 chr10 54434963 54435185 -85881580 - MIR SINE MIR 0 262 34 276 215 111 37 chr10 54435580 54435715 -85881050 + L1MC4 LINE L1 7760 7904 -138 2542 81 0 0 chr10 54435837 54436146 -85880619 - AluY SINE Alu -2 309 1 31 58 0 0 chr10 54436358 54436410 -85880355 + AT_rich Low_complexity Low_complexity 1 52 0 260 241 25 25 chr10 54436430 54436509 -85880256 + GA-rich Low_complexity Low_complexity 1 79 0 1617 192 18 3 chr10 54436624 54436910 -85879855 - AluSx SINE Alu -22 290 1 1019 118 0 26 chr10 54437265 54437417 -85879348 - AluSg/x SINE Alu -8 304 157 186 330 23 23 chr10 54437533 54437621 -85879144 + MER5A DNA MER1_type 38 125 -64 2282 92 30 0 chr10 54437624 54437919 -85878846 - AluSx SINE Alu -6 306 3 1921 137 3 7 chr10 54437929 54438222 -85878543 - AluSx SINE Alu -20 292 1 389 276 154 0 chr10 54438277 54438433 -85878332 - MLT1K LTR MaLR 0 588 409 229 257 14 71 chr10 54438577 54438647 -85878118 - MLT1K LTR MaLR -415 173 108 1929 125 14 3 chr10 54438852 54439141 -85877624 - AluSp SINE Alu 0 313 22 464 198 74 8 chr10 54440070 54440191 -85876574 - L2 LINE L2 -1 3312 3184 1825 162 0 20 chr10 54440542 54440844 -85875921 + AluJb SINE Alu 1 296 -16 1984 153 0 0 chr10 54440847 54441129 -85875636 + AluJo SINE Alu 1 282 -30 279 263 25 0 chr10 54441137 54441217 -85875548 - L1ME4a LINE L1 -69 6052 5971 259 264 76 18 chr10 54441222 54441332 -85875433 - MIR SINE MIR -66 142 15 1093 170 13 74 chr10 54442701 54442930 -85873835 - MER20 DNA MER1_type -4 215 1 2050 146 7 3 chr10 54443023 54443325 -85873440 + AluJb SINE Alu 1 303 -9 300 237 43 75 chr10 54443760 54443853 -85872912 + MIR3 SINE MIR 86 175 -33 2706 42 0 6 chr10 54445587 54445898 -85870867 + AluY SINE Alu 1 309 -2 2216 114 0 10 chr10 54445909 54446208 -85870557 + AluSx SINE Alu 1 296 -16 264 242 101 31 chr10 54446222 54446358 -85870407 + L1M2 LINE L1 5327 5467 -672 333 286 11 66 chr10 54446393 54446546 -85870219 + L1ME4a LINE L1 5584 5727 -394 1927 168 13 7 chr10 54446546 54446855 -85869910 + AluJo SINE Alu 1 311 -1 333 286 11 66 chr10 54446855 54446883 -85869882 + L1ME4a LINE L1 5727 5755 -366 540 163 32 41 chr10 54446887 54447010 -85869755 + FLAM_A SINE Alu 1 122 -11 645 271 75 104 chr10 54447017 54447200 -85869565 + L1ME4a LINE L1 5726 5913 -208 2320 95 7 0 chr10 54447200 54447494 -85869271 + AluSc SINE Alu 1 296 -13 645 271 75 104 chr10 54447494 54447712 -85869053 + L1ME4a LINE L1 5913 6115 -6 22 35 0 0 chr10 54447712 54447741 -85869024 + AT_rich Low_complexity Low_complexity 1 29 0 736 152 38 38 chr10 54447754 54447886 -85868879 + FLAM_A SINE Alu 2 133 0 2007 128 35 0 chr10 54447928 54448216 -85868549 - AluSx SINE Alu -14 298 1 2239 114 10 3 chr10 54448240 54448548 -85868217 - AluSx SINE Alu -2 310 1 1834 118 0 32 chr10 54448549 54448829 -85867936 - AluSx SINE Alu -8 304 34 322 295 20 29 chr10 54448842 54449101 -85867664 + CT-rich Low_complexity Low_complexity 1 256 0 188 214 18 0 chr10 54449104 54449160 -85867605 + C-rich Low_complexity Low_complexity 2 58 0 3973 124 12 41 chr10 54449357 54449682 -85867083 - L1MB4 LINE L1 -30 6150 5817 2393 114 0 0 chr10 54449682 54449989 -85866776 - AluSx SINE Alu -5 307 1 3973 124 12 41 chr10 54449989 54450327 -85866438 - L1MB4 LINE L1 -363 5817 5507 994 151 6 78 chr10 54450327 54450469 -85866296 - AluJo/FRAM SINE Alu 0 302 174 2180 132 0 0 chr10 54450469 54450765 -85866000 + AluSx SINE Alu 1 296 -16 994 151 6 78 chr10 54450765 54450801 -85865964 - AluJo/FRAM SINE Alu -128 174 137 3973 124 12 41 chr10 54450801 54450861 -85865904 - L1MB4 LINE L1 -673 5507 5447 250 363 30 15 chr10 54451770 54451905 -85864860 - MIR3 SINE MIR -65 143 7 225 0 0 0 chr10 54452088 54452113 -85864652 + (T)n Simple_repeat Simple_repeat 1 25 0 1627 134 63 16 chr10 54452287 54452540 -85864225 - AluSq SINE Alu -48 265 1 1611 197 30 7 chr10 54452770 54453074 -85863691 + AluJo SINE Alu 1 311 -1 363 145 14 14 chr10 54453106 54453175 -85863590 - LTR16C LTR ERVL -3 488 420 1002 194 16 121 chr10 54453176 54453264 -85863501 - LTR16C LTR ERVL -41 450 354 1873 143 63 3 chr10 54453264 54453551 -85863214 + AluJo SINE Alu 1 304 -8 2076 142 0 0 chr10 54453551 54453846 -85862919 + AluSx SINE Alu 1 295 -17 1002 194 16 121 chr10 54453846 54454137 -85862628 - LTR16C LTR ERVL -135 356 110 366 325 138 0 chr10 54454163 54454323 -85862442 + MER102a DNA MER1_type 149 330 0 1517 179 42 45 chr10 54454454 54454766 -85861999 + AluJb SINE Alu 2 312 0 217 379 107 0 chr10 54454941 54455081 -85861684 + L2 LINE L2 2882 3036 -236 563 276 15 0 chr10 54455537 54455671 -85861094 + L2 LINE L2 3137 3272 0 1471 126 5 0 chr10 54455968 54456167 -85860598 + AluJo SINE Alu 97 296 -16 1490 153 0 0 chr10 54456170 54456392 -85860373 + AluJb SINE Alu 83 304 -8 180 152 0 0 chr10 54456498 54456531 -85860234 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 468 244 30 92 chr10 54456647 54456679 -85860086 - L1ME4a LINE L1 -150 5971 5939 2317 94 0 14 chr10 54456679 54456976 -85859789 - AluSg SINE Alu -17 293 1 468 244 30 92 chr10 54456976 54457060 -85859705 - L1ME4a LINE L1 -182 5939 5865 1932 167 0 23 chr10 54457060 54457366 -85859399 - AluJo SINE Alu -13 299 1 468 244 30 92 chr10 54457366 54457412 -85859353 - L1ME4a LINE L1 -256 5865 5818 818 209 128 107 chr10 54458514 54458896 -85857869 - MLT1B LTR MaLR 0 390 1 1284 288 107 66 chr10 54458950 54460757 -85856008 - L1MC5 LINE L1 -722 7239 5336 2265 98 3 7 chr10 54460771 54461068 -85855697 - AluSx SINE Alu -16 296 1 2143 75 4 11 chr10 54461173 54461451 -85855314 - AluY SINE Alu -3 308 33 402 351 68 28 chr10 54461582 54461830 -85854935 + MIR SINE MIR 5 262 0 235 230 110 29 chr10 54462001 54462310 -85854455 - L1MC5 LINE L1 -58 7903 7570 2522 92 0 3 chr10 54462410 54462716 -85854049 - AluY SINE Alu -6 305 1 1618 99 0 23 chr10 54462716 54462896 -85853869 - AluSg/x SINE Alu 0 312 129 208 51 26 26 chr10 54462896 54462935 -85853830 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2269 91 3 0 chr10 54462935 54463220 -85853545 - AluSp SINE Alu -27 286 1 1618 99 0 23 chr10 54463220 54463259 -85853506 - AluSg/x SINE Alu -181 131 97 493 237 125 79 chr10 54464361 54464640 -85852125 - MER102a DNA MER1_type -1 329 38 801 174 101 0 chr10 54466218 54466367 -85850398 - AluJo SINE Alu -12 300 137 22 0 0 0 chr10 54467409 54467431 -85849334 + GC_rich Low_complexity Low_complexity 1 22 0 399 243 98 12 chr10 54467939 54468212 -85848553 - MER110A LTR ERV1 -1 467 132 629 170 179 0 chr10 54469518 54469630 -85847135 - AluJo SINE Alu -170 132 1 2684 40 0 0 chr10 54469633 54469933 -85846832 - AluY SINE Alu -11 300 1 405 260 167 42 chr10 54469970 54470162 -85846603 - MIR SINE MIR -46 216 1 217 261 91 45 chr10 54470707 54470795 -85845970 + MIR SINE MIR 23 114 -148 297 113 0 0 chr10 54470795 54470848 -85845917 - AluSp/q SINE Alu 0 303 251 2214 92 0 7 chr10 54471593 54471902 -85844863 + AluSg SINE Alu 1 307 0 708 197 115 0 chr10 54471902 54472085 -85844680 + MIR SINE MIR 59 262 0 940 181 13 0 chr10 54472086 54472241 -85844524 + FRAM SINE Alu 1 157 -19 21 0 0 0 chr10 54472302 54472323 -85844442 + AT_rich Low_complexity Low_complexity 1 21 0 1798 177 33 6 chr10 54473238 54473600 -85843165 - L1MB8 LINE L1 -5 6173 5802 2067 103 23 0 chr10 54473601 54473863 -85842902 + AluSg SINE Alu 1 268 -42 374 321 18 0 chr10 54475614 54475726 -85841039 + L2 LINE L2 3136 3249 -23 296 147 59 15 chr10 54476397 54476465 -85840300 + MIR SINE MIR 128 198 -64 2467 69 0 3 chr10 54476537 54476840 -85839925 + AluY SINE Alu 1 302 -9 1209 184 120 34 chr10 54477535 54477802 -85838963 + AluSg1 SINE Alu 1 290 -19 283 289 237 0 chr10 54479000 54479097 -85837668 - L2 LINE L2 -7 3265 3146 1195 66 0 0 chr10 54479099 54479235 -85837530 - AluSg SINE Alu -174 136 1 353 225 135 0 chr10 54479245 54479334 -85837431 - MIR SINE MIR -21 241 141 1554 81 0 10 chr10 54479422 54479620 -85837145 + AluSg/x SINE Alu 93 288 -22 287 274 69 39 chr10 54479620 54479722 -85837043 - MIR SINE MIR -153 109 5 506 314 0 28 chr10 54480442 54480640 -85836125 + MIR SINE MIR 18 206 -56 1859 173 17 10 chr10 54480719 54481020 -85835745 - AluJb SINE Alu -8 304 2 2274 92 10 0 chr10 54481904 54482197 -85834568 - AluSx SINE Alu -15 297 2 2720 180 36 42 chr10 54483121 54483889 -85832876 + LTR13 LTR ERVK 192 1007 0 1428 159 26 17 chr10 54483918 54484220 -85832545 - L1MA6 LINE L1 -1 6299 5995 2007 169 174 18 chr10 54484282 54484392 -85832373 + MLT1D LTR MaLR 1 93 -412 2071 113 38 10 chr10 54484392 54484683 -85832082 - AluSx SINE Alu -13 299 1 2007 169 174 18 chr10 54484683 54485009 -85831756 + MLT1D LTR MaLR 93 505 0 1661 189 3 31 chr10 54485232 54485550 -85831215 - AluJo SINE Alu -3 309 1 691 220 0 8 chr10 54485553 54485685 -85831080 - FLAM_A SINE Alu -2 131 1 2224 66 0 11 chr10 54486150 54486423 -85830342 - AluSg SINE Alu -25 285 16 559 324 62 5 chr10 54488687 54488912 -85827853 - MIR SINE MIR -24 238 1 2398 97 0 0 chr10 54489759 54490069 -85826696 - AluSx SINE Alu 0 312 3 414 278 59 59 chr10 54490076 54490263 -85826502 - L1ME4a LINE L1 0 6121 5935 2029 111 56 3 chr10 54490347 54490635 -85826130 - AluSc SINE Alu -6 303 1 1117 156 9 5 chr10 54490643 54490855 -85825910 - L1MD3 LINE L1 -13 7982 7770 2208 121 0 31 chr10 54490880 54491202 -85825563 - AluSx SINE Alu 0 312 1 2240 96 10 7 chr10 54491252 54491554 -85825211 - AluSx SINE Alu -9 303 1 6797 140 88 48 chr10 54492651 54494023 -85822742 - pTR5 LTR ERV1 -143 2295 142 243 0 0 0 chr10 54494212 54494239 -85822526 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 698 147 26 0 chr10 54494239 54494355 -85822410 - FLAM_C SINE Alu -23 120 2 252 361 22 6 chr10 54494359 54494539 -85822226 - L1M4 LINE L1 -747 5399 5217 2194 121 0 3 chr10 54494723 54495020 -85821745 + AluSx SINE Alu 7 302 -10 337 268 105 42 chr10 54495085 54495168 -85821597 + L1ME3A LINE L1 5968 6044 -126 2108 144 0 7 chr10 54495168 54495474 -85821291 - AluJb SINE Alu -8 304 1 337 268 105 42 chr10 54495474 54495580 -85821185 + L1ME3A LINE L1 6044 6169 -1 2379 89 0 0 chr10 54495641 54495932 -85820833 - AluSg SINE Alu -19 291 1 1967 145 0 13 chr10 54496358 54496661 -85820104 + AluJb SINE Alu 1 299 -13 1103 83 0 0 chr10 54497757 54497889 -85818876 - FLAM_C SINE Alu -11 132 1 318 246 14 17 chr10 54498160 54498309 -85818456 + MER5B DNA MER1_type 1 186 -3 899 206 11 6 chr10 54498320 54498495 -85818270 - MER5A DNA MER1_type -1 188 13 2237 105 3 7 chr10 54498514 54498808 -85817957 + AluSx SINE Alu 1 293 -19 2479 86 0 0 chr10 54499203 54499505 -85817260 + AluSg SINE Alu 1 302 -8 195 42 0 0 chr10 54499522 54499546 -85817219 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 675 188 0 0 chr10 54499546 54499663 -85817102 - FLAM_A SINE Alu -16 117 1 260 298 171 31 chr10 54500788 54501144 -85815621 + L2 LINE L2 2866 3271 -1 397 286 129 50 chr10 54501396 54501637 -85815128 - L1M4 LINE L1 -1861 4285 4026 1131 105 7 20 chr10 54501732 54501885 -85814880 + AluSx SINE Alu 1 151 -161 2286 138 0 0 chr10 54501891 54502203 -85814562 + AluSx SINE Alu 1 312 0 2363 110 0 0 chr10 54502228 54502537 -85814228 + AluSg1 SINE Alu 1 309 0 1244 130 6 0 chr10 54502537 54502706 -85814059 + AluSx SINE Alu 130 299 -11 1826 157 4 11 chr10 54502719 54503000 -85813765 + AluSx SINE Alu 1 279 -33 484 164 57 8 chr10 54503121 54503243 -85813522 - L1MB2 LINE L1 -7 6164 6037 375 125 0 11 chr10 54503252 54503320 -85813445 - Alu SINE Alu -252 51 1 2807 148 58 28 chr10 54503320 54503886 -85812879 - L1MB2 LINE L1 -128 6043 5461 1979 137 10 26 chr10 54504557 54504863 -85811902 - AluSx SINE Alu -11 301 1 944 125 29 0 chr10 54505325 54505461 -85811304 - AluSg/x SINE Alu -50 262 123 1273 236 114 20 chr10 54505487 54505889 -85810876 + LTR48B LTR ERV1 1 440 -204 652 177 102 0 chr10 54505897 54506044 -85810721 + LTR49 LTR ERV1 434 595 0 2426 67 0 10 chr10 54506090 54506388 -85810377 + AluY SINE Alu 1 295 -16 2044 146 3 0 chr10 54506547 54506842 -85809923 + AluJb SINE Alu 1 296 -16 1010 106 0 0 chr10 54506856 54506988 -85809777 - FLAM_C SINE Alu -11 132 1 46 0 0 0 chr10 54506991 54507037 -85809728 + AT_rich Low_complexity Low_complexity 1 46 0 303 28 0 0 chr10 54507055 54507091 -85809674 + (CA)n Simple_repeat Simple_repeat 1 36 0 3277 111 13 47 chr10 54507105 54507383 -85809382 - MER4B LTR ERV1 -1 778 492 2147 113 24 3 chr10 54507383 54507676 -85809089 + AluSq SINE Alu 1 299 -14 3277 111 13 47 chr10 54507676 54508028 -85808737 - MER4B LTR ERV1 -287 492 1 204 254 32 0 chr10 54508028 54508091 -85808674 + (CATA)n Simple_repeat Simple_repeat 4 68 0 865 234 67 35 chr10 54509248 54509309 -85807456 + MER46C DNA MER2_type 11 69 -269 2180 138 0 0 chr10 54509309 54509605 -85807160 + AluSx SINE Alu 1 296 -16 865 234 67 35 chr10 54509605 54509855 -85806910 + MER46C DNA MER2_type 69 332 -6 286 280 8 15 chr10 54511243 54511375 -85805390 + G-rich Low_complexity Low_complexity 3 133 0 277 181 0 56 chr10 54511396 54511468 -85805297 - LTR13 LTR ERVK -924 83 16 2051 122 3 11 chr10 54511476 54511762 -85805003 + AluSx SINE Alu 15 298 -14 1578 96 5 14 chr10 54512483 54512692 -85804073 + AluSg/x SINE Alu 86 292 -18 2165 139 3 0 chr10 54513067 54513376 -85803389 + AluSx SINE Alu 1 310 -2 540 267 102 65 chr10 54513645 54514152 -85802613 - L2 LINE L2 -40 3232 2704 201 302 69 9 chr10 54514134 54514250 -85802515 - MIR SINE MIR -2 260 138 * 2262 107 0 3 chr10 54514264 54514572 -85802193 - AluSx SINE Alu 0 312 6 183 152 0 0 chr10 54514617 54514650 -85802115 - MIR SINE MIR -128 134 102 572 150 173 16 chr10 54514784 54514911 -85801854 + MER20 DNA MER1_type 3 149 -70 1958 143 16 32 chr10 54515019 54515333 -85801432 - AluJo SINE Alu -1 311 3 2028 109 71 3 chr10 54516581 54516864 -85799901 + AluSx SINE Alu 1 302 -10 1855 125 37 40 chr10 54517272 54517569 -85799196 + AluSx SINE Alu 1 296 -16 402 230 80 0 chr10 54517581 54517694 -85799071 - MIR3 SINE MIR -29 179 58 362 269 88 25 chr10 54518567 54518727 -85798038 + MIR SINE MIR 49 218 -44 2509 92 0 3 chr10 54518866 54519180 -85797585 + AluSq SINE Alu 1 313 0 1538 180 3 84 chr10 54519306 54519689 -85797076 + MLT1A2 LTR MaLR 5 356 -18 1310 142 9 13 chr10 54520079 54520311 -85796454 + L1MC1 LINE L1 5547 5777 -407 1081 112 8 104 chr10 54520501 54520742 -85796023 + L1MC1 LINE L1 6116 6333 0 326 233 288 34 chr10 54520997 54521143 -85795622 - MER5A DNA MER1_type 0 189 7 332 231 46 37 chr10 54521160 54521268 -85795497 + MIR SINE MIR 27 135 -127 658 248 66 35 chr10 54522287 54522513 -85794252 + MIR SINE MIR 28 260 -2 676 180 8 0 chr10 54522543 54522671 -85794094 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 54523046 54523101 -85793664 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 459 287 60 12 chr10 54524495 54524662 -85792103 + MIR SINE MIR 13 187 -75 387 259 71 18 chr10 54524656 54524768 -85791997 + L2 LINE L2 3194 3311 -2 * 244 200 53 40 chr10 54524759 54524834 -85791931 + MIR SINE MIR 187 262 0 * 2271 110 3 10 chr10 54526566 54526874 -85789891 + AluSx SINE Alu 3 308 -4 2250 92 0 3 chr10 54527788 54528091 -85788674 + AluSx SINE Alu 7 312 0 1430 175 4 19 chr10 54532290 54532547 -85784218 - AluJo SINE Alu -18 294 42 1934 158 7 0 chr10 54532728 54533038 -85783727 + AluSx SINE Alu 1 312 0 329 241 59 91 chr10 54533230 54533450 -85783315 - MIR SINE MIR -34 228 16 289 258 133 33 chr10 54536270 54536390 -85780375 + MIR SINE MIR 21 152 -110 552 251 36 24 chr10 54536424 54536591 -85780174 + MER5B DNA MER1_type 5 173 -5 914 240 25 0 chr10 54536826 54537026 -85779739 - MIR SINE MIR -11 251 47 2137 120 3 0 chr10 54539226 54539535 -85777230 + AluSx SINE Alu 1 310 -2 1551 160 34 20 chr10 54539755 54540049 -85776716 + AluJo SINE Alu 1 298 -14 264 320 30 54 chr10 54540212 54540415 -85776350 - L2 LINE L2 -216 3056 2859 2072 107 47 7 chr10 54540593 54540893 -85775872 + AluJo SINE Alu 1 312 0 183 182 0 0 chr10 54543163 54543196 -85773569 - MIR SINE MIR -113 149 117 1889 99 62 0 chr10 54544160 54544433 -85772332 + AluSx SINE Alu 1 290 -22 267 248 9 16 chr10 54548700 54548797 -85767968 - MER5B DNA MER1_type 0 189 1 2133 99 14 3 chr10 54548871 54549163 -85767602 + AluSx SINE Alu 1 295 -17 288 43 0 0 chr10 54549415 54549462 -85767303 - AluSp/q SINE Alu -4 299 253 232 239 0 0 chr10 54551881 54551927 -85764838 + GA-rich Low_complexity Low_complexity 1 46 0 647 284 6 16 chr10 54553457 54553640 -85763125 + MER5A DNA MER1_type 8 188 -1 242 337 40 0 chr10 54553930 54554031 -85762734 - L2 LINE L2 -1 3312 3208 237 339 9 43 chr10 54556740 54556855 -85759910 - L3 LINE CR1 -1170 407 297 576 134 0 0 chr10 54557577 54557659 -85759106 + AluJ/FRAM SINE Alu 217 298 -14 434 92 0 0 chr10 54557688 54557753 -85759012 - AluSp/q SINE Alu -11 302 238 901 333 47 33 chr10 54557794 54558365 -85758400 - L2 LINE L2 -737 2577 1999 250 316 107 60 chr10 54558716 54558950 -85757815 + L2 LINE L2 2838 3082 -190 2219 107 0 7 chr10 54559083 54559391 -85757374 + AluSg1 SINE Alu 1 306 -3 818 164 0 8 chr10 54559459 54559593 -85757172 - FLAM_C SINE Alu 0 133 1 1872 143 14 59 chr10 54559638 54559948 -85756817 + L1MB8 LINE L1 5829 6122 -56 778 214 0 0 chr10 54559948 54560079 -85756686 + FLAM_A SINE Alu 1 131 -2 1872 143 14 59 chr10 54560079 54560125 -85756640 + L1MB8 LINE L1 6122 6169 -9 1040 157 6 6 chr10 54560127 54560286 -85756479 - FRAM SINE Alu -7 159 1 2220 81 3 3 chr10 54560697 54560993 -85755772 + AluSg SINE Alu 1 296 -14 2284 82 3 0 chr10 54560998 54561291 -85755474 + AluSc SINE Alu 1 294 -15 779 236 21 5 chr10 54561413 54561604 -85755161 + MIR SINE MIR 28 221 -41 2062 120 0 10 chr10 54561606 54561907 -85754858 + AluSx SINE Alu 1 298 -14 2344 71 0 10 chr10 54561907 54562216 -85754549 + AluSg SINE Alu 1 306 -4 694 274 67 39 chr10 54562666 54562743 -85754022 - MIR SINE MIR 0 262 189 1844 121 3 31 chr10 54562743 54563053 -85753712 - AluSq SINE Alu 0 302 1 694 274 67 39 chr10 54563053 54563229 -85753536 - MIR SINE MIR -73 189 1 1934 118 0 4 chr10 54563271 54563543 -85753222 + AluSx SINE Alu 26 296 -16 381 317 35 7 chr10 54563724 54563869 -85752896 + MER5B DNA MER1_type 1 149 -29 2088 81 3 11 chr10 54564188 54564503 -85752262 - AluSx SINE Alu 0 313 1 2024 143 13 0 chr10 54564525 54564833 -85751932 - AluJo SINE Alu 0 312 1 466 311 0 8 chr10 54564914 54565036 -85751729 + MER91A DNA MER1_type 2 122 -74 30 59 0 0 chr10 54565250 54565301 -85751464 + AT_rich Low_complexity Low_complexity 1 51 0 1884 134 3 33 chr10 54566452 54566759 -85750006 - AluSx SINE Alu -13 299 2 463 303 55 36 chr10 54568142 54568307 -85748458 + MER91A DNA MER1_type 1 168 -28 2028 138 3 0 chr10 54569847 54570145 -85746620 - AluSx SINE Alu -13 299 1 2308 56 24 0 chr10 54571708 54571996 -85744769 + AluY SINE Alu 1 295 -16 2293 94 0 7 chr10 54572723 54573032 -85743733 - AluSx SINE Alu -1 311 5 268 171 61 61 chr10 54575381 54575463 -85741302 + MIR SINE MIR 111 192 -70 939 287 106 53 chr10 54575560 54575691 -85741074 - L2 LINE L2 -21 3292 3169 1839 154 3 3 chr10 54575691 54575997 -85740768 + AluSx SINE Alu 1 306 -6 939 287 106 53 chr10 54575997 54576045 -85740720 - L2 LINE L2 -144 3169 3125 2213 113 0 0 chr10 54576045 54576347 -85740418 + AluSx SINE Alu 1 302 -10 939 287 106 53 chr10 54576347 54576741 -85740024 - L2 LINE L2 -188 3125 2753 2201 99 0 0 chr10 54576741 54577034 -85739731 + AluSq SINE Alu 3 295 -18 939 287 106 53 chr10 54577034 54577337 -85739428 - L2 LINE L2 -560 2753 2361 801 153 7 15 chr10 54577947 54578084 -85738681 + AluJo SINE Alu 2 137 -175 2290 88 0 10 chr10 54578097 54578232 -85738533 + AluSx SINE Alu 1 136 -176 2334 87 0 7 chr10 54578232 54578542 -85738223 + AluSq SINE Alu 1 308 -5 2290 88 0 10 chr10 54578542 54578712 -85738053 + AluSx SINE Alu 136 303 -9 318 26 0 0 chr10 54578712 54578751 -85738014 + (TA)n Simple_repeat Simple_repeat 1 39 0 237 222 0 0 chr10 54578751 54578796 -85737969 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 54579522 54579555 -85737210 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 419 276 116 25 chr10 54580079 54580278 -85736487 + MIR SINE MIR 8 224 -38 2363 64 3 0 chr10 54582452 54582747 -85734018 + AluY SINE Alu 2 297 -14 185 182 152 0 chr10 54583601 54583667 -85733098 + MIR SINE MIR 79 154 -108 3579 62 0 7 chr10 54584722 54585173 -85731592 + LTR7 LTR ERV1 1 448 -2 20526 88 60 23 chr10 54585175 54588348 -85728417 + HERVH LTR ERV1 1 3290 -4423 3266 125 0 6 chr10 54588338 54588843 -85727922 + HERVH LTR ERV1 3492 3993 -3720 * 4310 136 6 3 chr10 54588845 54589502 -85727263 + HERVH LTR ERV1 4488 5146 -2567 1356 114 23 18 chr10 54589506 54589725 -85727040 + HERVH LTR ERV1 5600 5819 -1894 * 2511 79 45 13 chr10 54589723 54590103 -85726662 + HERVH LTR ERV1 7322 7713 0 3245 54 16 9 chr10 54590103 54590548 -85726217 + LTR7 LTR ERV1 1 448 -2 21 57 0 0 chr10 54591557 54591592 -85725173 + AT_rich Low_complexity Low_complexity 1 35 0 412 311 20 131 chr10 54591681 54591986 -85724779 - L2 LINE L2 0 3272 3002 2173 61 48 14 chr10 54592297 54592590 -85724175 + AluY SINE Alu 1 303 -8 776 110 102 0 chr10 54592740 54592867 -85723898 - AluSg/x SINE Alu 0 312 173 254 167 0 0 chr10 54593278 54593320 -85723445 + 5S rRNA rRNA 1 42 -79 499 248 105 0 chr10 54593605 54593758 -85723007 - MIR SINE MIR -74 188 20 322 360 96 8 chr10 54594209 54594334 -85722431 - L2 LINE L2 -8 3264 3129 4069 172 16 14 chr10 54594866 54595640 -85721125 + L1MC1 LINE L1 5542 6316 -17 335 332 48 27 chr10 54595900 54596087 -85720678 - L2 LINE L2 -962 2352 2162 7486 27 5 1 chr10 54596737 54597626 -85719139 + L1PA3 LINE L1 5261 6152 -3 290 333 38 87 chr10 54597691 54597874 -85718891 + MER5B DNA MER1_type 3 176 -2 21 0 0 0 chr10 54599417 54599438 -85717327 + AT_rich Low_complexity Low_complexity 1 21 0 1156 140 21 5 chr10 54599438 54599631 -85717134 - L1PA16 LINE L1 -9 6157 5962 197 325 62 38 chr10 54599642 54599722 -85717043 - L2 LINE L2 -22 3291 3210 2036 116 3 28 chr10 54599995 54600313 -85716452 - AluSx SINE Alu -2 310 1 326 323 77 8 chr10 54600364 54600494 -85716271 - L2 LINE L2 0 3313 3175 288 0 0 0 chr10 54600553 54600585 -85716180 + (TG)n Simple_repeat Simple_repeat 2 33 0 2213 94 37 0 chr10 54601017 54601316 -85715449 - AluSp SINE Alu -2 311 2 228 143 0 0 chr10 54602478 54602520 -85714245 + (TG)n Simple_repeat Simple_repeat 2 43 0 974 242 23 5 chr10 54602599 54602814 -85713951 - MER20 DNA MER1_type 0 219 1 258 56 0 0 chr10 54603118 54603154 -85713611 + (CATA)n Simple_repeat Simple_repeat 1 36 0 22 35 0 0 chr10 54604873 54604902 -85711863 + AT_rich Low_complexity Low_complexity 1 29 0 289 323 11 0 chr10 54606848 54606941 -85709824 + (CATATA)n Simple_repeat Simple_repeat 1 94 0 26 30 0 0 chr10 54607213 54607246 -85709519 + AT_rich Low_complexity Low_complexity 1 33 0 378 91 0 0 chr10 54607966 54608021 -85708744 + (TG)n Simple_repeat Simple_repeat 2 56 0 1469 194 10 10 chr10 54608451 54608750 -85708015 - AluJo SINE Alu -13 299 1 573 341 72 12 chr10 54608892 54609141 -85707624 + L3 LINE CR1 1213 1476 -101 295 409 71 46 chr10 54609193 54609543 -85707222 - L2 LINE L2 -31 3241 2883 1567 144 44 69 chr10 54609682 54610002 -85706763 + AluSx SINE Alu 1 312 0 845 151 18 18 chr10 54610002 54610274 -85706491 + GA-rich Low_complexity Low_complexity 1 272 0 200 167 0 0 chr10 54610274 54610304 -85706461 + polypurine Low_complexity Low_complexity 1 30 0 26 74 0 0 chr10 54610670 54610724 -85706041 + AT_rich Low_complexity Low_complexity 1 54 0 238 299 0 15 chr10 54611028 54611095 -85705670 - MIR SINE MIR -169 93 28 262 271 31 21 chr10 54611097 54611193 -85705572 + MER103 DNA DNA 62 158 -8 406 329 90 17 chr10 54611823 54612057 -85704708 + MIR SINE MIR 3 253 -9 250 258 0 0 chr10 54612109 54612175 -85704590 + A-rich Low_complexity Low_complexity 1 66 0 568 270 49 0 chr10 54612353 54612516 -85704249 - MER3 DNA MER1_type -26 183 13 186 43 0 0 chr10 54612657 54612680 -85704085 + (TG)n Simple_repeat Simple_repeat 2 24 0 471 144 0 0 chr10 54612697 54612794 -85703971 + (TCTA)n Simple_repeat Simple_repeat 4 100 0 272 381 24 0 chr10 54613081 54613207 -85703558 - MLT1K LTR MaLR -326 262 134 2384 75 0 0 chr10 54614183 54614488 -85702277 - AluY SINE Alu -6 305 1 1480 203 45 28 chr10 54614689 54615048 -85701717 + MLT1A1 LTR MaLR 1 365 0 22 35 0 0 chr10 54615070 54615099 -85701666 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 54615360 54615389 -85701376 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr10 54615563 54615608 -85701157 + AT_rich Low_complexity Low_complexity 1 45 0 871 264 103 13 chr10 54615717 54616107 -85700658 + Charlie4a DNA MER1_type 80 504 -4 2695 14 0 0 chr10 54616539 54616835 -85699930 - AluYa5 SINE Alu -3 308 13 212 294 24 59 chr10 54617367 54617452 -85699313 - MIR SINE MIR -93 115 34 282 116 0 0 chr10 54617602 54617645 -85699120 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1617 79 9 0 chr10 54618321 54618549 -85698216 - L1PA7 LINE L1 0 6154 5925 1600 289 98 10 chr10 54618585 54619184 -85697581 + L2 LINE L2 1819 2470 -844 35 63 0 0 chr10 54619425 54619488 -85697277 + AT_rich Low_complexity Low_complexity 1 63 0 220 314 68 68 chr10 54619566 54619684 -85697081 + L2 LINE L2 3184 3301 -12 24 0 0 0 chr10 54619716 54619740 -85697025 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 54620255 54620279 -85696486 + AT_rich Low_complexity Low_complexity 1 24 0 228 342 13 0 chr10 54620362 54620438 -85696327 + GA-rich Low_complexity Low_complexity 4 80 0 294 333 12 77 chr10 54620510 54620577 -85696188 - MER5A DNA MER1_type 0 189 119 2167 113 3 0 chr10 54620577 54620878 -85695887 + AluSp SINE Alu 1 302 -11 294 333 12 77 chr10 54620878 54620978 -85695787 - MER5A DNA MER1_type -70 119 33 414 213 82 127 chr10 54622405 54622649 -85694116 + L1ME3A LINE L1 5934 6166 -4 315 0 0 0 chr10 54623528 54623563 -85693202 + (TG)n Simple_repeat Simple_repeat 2 36 0 386 134 15 0 chr10 54623635 54623702 -85693063 - MADE1 DNA Mariner -12 68 1 384 22 0 0 chr10 54625411 54625456 -85691309 + (TG)n Simple_repeat Simple_repeat 2 46 0 1131 204 77 85 chr10 54626394 54626757 -85690008 + MLT1A1 LTR MaLR 1 360 -5 282 125 0 0 chr10 54626761 54626809 -85689956 + (TG)n Simple_repeat Simple_repeat 2 49 0 399 349 75 33 chr10 54628398 54628822 -85687943 - L2 LINE L2 -11 3261 2820 376 271 37 0 chr10 54629255 54629362 -85687403 + MER94 DNA DNA 5 115 -19 243 323 51 116 chr10 54630495 54630771 -85685994 + L2 LINE L2 2924 3181 -91 386 324 99 31 chr10 54630844 54631050 -85685715 + MIR SINE MIR 4 221 -41 268 336 0 33 chr10 54631204 54631326 -85685439 + L2 LINE L2 2928 3045 -227 24 32 0 0 chr10 54632392 54632423 -85684342 + AT_rich Low_complexity Low_complexity 1 31 0 1780 169 3 0 chr10 54632647 54632937 -85683828 - AluSx SINE Alu -21 291 1 197 386 8 31 chr10 54633169 54633296 -85683469 - MIR3 SINE MIR -45 163 40 352 325 81 34 chr10 54633502 54633806 -85682959 + L1MC5 LINE L1 4928 5249 -897 2372 65 3 10 chr10 54633806 54634115 -85682650 + AluY SINE Alu 1 307 -4 352 325 81 34 chr10 54634115 54634133 -85682632 + L1MC5 LINE L1 5249 5265 -881 2176 98 3 7 chr10 54634220 54634517 -85682248 + AluSx SINE Alu 1 296 -16 835 300 143 28 chr10 54634531 54635064 -85681701 + L1MC5 LINE L1 5336 5929 -1879 22 35 0 0 chr10 54635235 54635264 -85681501 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 54635276 54635297 -85681468 + AT_rich Low_complexity Low_complexity 1 21 0 1874 231 63 118 chr10 54635586 54636392 -85680373 + L1MC5 LINE L1 6500 7349 -612 712 209 128 107 chr10 54636392 54636774 -85679991 + MLT1B LTR MaLR 1 390 0 1874 231 63 118 chr10 54636774 54637018 -85679747 + L1MC5 LINE L1 7349 7605 -356 2307 62 0 68 chr10 54637018 54637341 -85679424 + AluY SINE Alu 1 301 -10 1874 231 63 118 chr10 54637341 54637355 -85679410 + L1MC5 LINE L1 7605 7618 -343 2355 84 0 10 chr10 54637355 54637663 -85679102 + AluY SINE Alu 1 305 -6 1874 231 63 118 chr10 54637663 54638072 -85678693 + L1MC5 LINE L1 7618 7903 -58 443 339 57 45 chr10 54638246 54638491 -85678274 - MIR SINE MIR -10 252 5 2195 24 0 0 chr10 54638622 54638872 -85677893 + AluY SINE Alu 33 282 -29 1022 41 0 0 chr10 54638749 54638872 -85677893 + AluY SINE Alu 160 340 0 453 17 0 17 chr10 54638872 54638930 -85677835 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 385 121 0 0 chr10 54639082 54639140 -85677625 + AluY SINE Alu 125 182 -119 22 0 0 0 chr10 54639273 54639295 -85677470 + AT_rich Low_complexity Low_complexity 1 22 0 1386 244 68 53 chr10 54639485 54639644 -85677121 - L1ME1 LINE L1 -96 6070 5915 2029 125 3 7 chr10 54639644 54639949 -85676816 - AluSq SINE Alu -9 304 1 1386 244 68 53 chr10 54639949 54640257 -85676508 - L1ME1 LINE L1 -251 5915 5596 1267 248 78 19 chr10 54640308 54641076 -85675689 - L1MD2 LINE L1 -248 6111 5073 2093 110 27 0 chr10 54641076 54641377 -85675388 + AluSp SINE Alu 1 309 -4 1267 248 78 19 chr10 54641377 54641591 -85675174 - L1MD2 LINE L1 -1286 5073 4873 303 325 83 17 chr10 54643198 54643318 -85673447 + MER5A DNA MER1_type 60 187 -2 292 228 141 0 chr10 54643747 54643839 -85672926 - L1ME2 LINE L1 0 6164 6060 273 281 196 13 chr10 54643848 54643999 -85672766 + Charlie7 DNA MER1_type 88 266 -2346 268 167 0 0 chr10 54643999 54644053 -85672712 - MLT2B2 LTR ERVL 0 520 400 1756 134 21 49 chr10 54644135 54644463 -85672302 - THE1B LTR MaLR 0 364 46 725 154 8 0 chr10 54644464 54644581 -85672184 + AluSq/x SINE Alu 1 118 -195 265 29 29 0 chr10 54644583 54644617 -85672148 - THE1B LTR MaLR -320 35 1 10699 125 6 1 chr10 54644617 54646189 -85670576 - THE1B-int LTR MaLR 0 1580 1 2021 127 47 41 chr10 54646189 54646551 -85670214 - THE1B LTR MaLR 0 364 1 2250 220 27 0 chr10 54646555 54646968 -85669797 - MLT2B2 LTR ERVL -91 424 1 834 304 19 27 chr10 54646968 54647343 -85669422 + Charlie7 DNA MER1_type 262 633 -1979 2072 148 33 19 chr10 54647507 54647866 -85668899 + THE1B LTR MaLR 1 364 0 280 342 43 32 chr10 54647961 54648148 -85668617 + MLT1H1 LTR MaLR 6 194 -361 231 222 0 0 chr10 54648396 54648450 -85668315 + A-rich Low_complexity Low_complexity 1 54 0 5481 183 24 2 chr10 54649149 54650118 -85666647 + MSTA-int LTR MaLR 657 1646 -5 1936 126 155 31 chr10 54650123 54650504 -85666261 + MSTA LTR MaLR 1 428 0 1875 264 105 11 chr10 54650510 54650963 -85665802 - L1M4 LINE L1 -2569 4075 3666 1604 191 3 50 chr10 54650963 54651282 -85665483 - AluJb SINE Alu 0 312 9 1875 264 105 11 chr10 54651282 54651710 -85665055 - L1M4 LINE L1 -2978 3666 3111 834 251 50 5 chr10 54651708 54651907 -85664858 - L1M4 LINE L1 -5802 740 533 * 401 0 0 20 chr10 54652179 54652229 -85664536 + (TG)n Simple_repeat Simple_repeat 2 50 0 233 296 44 37 chr10 54652320 54652455 -85664310 - MIR SINE MIR -6 256 121 865 178 6 6 chr10 54652460 54652617 -85664148 + FRAM SINE Alu 8 164 -12 250 376 18 18 chr10 54652628 54652737 -85664028 - MIR SINE MIR -142 120 12 523 307 105 36 chr10 54652888 54653373 -85663392 + L2 LINE L2 2720 3219 -94 180 324 137 0 chr10 54653508 54653610 -85663155 + L2 LINE L2 2920 3035 -237 33 43 0 0 chr10 54655401 54655448 -85661317 + AT_rich Low_complexity Low_complexity 1 47 0 720 163 144 25 chr10 54655613 54655773 -85660992 - MER58A DNA MER1_type -3 221 43 263 257 18 46 chr10 54655868 54655977 -85660788 + MER103 DNA DNA 12 117 -49 333 0 0 0 chr10 54656724 54656761 -85660004 + (CA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr10 54657456 54657480 -85659285 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 54657676 54657697 -85659068 + AT_rich Low_complexity Low_complexity 1 21 0 2547 52 0 0 chr10 54658667 54658977 -85657788 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 54659924 54659948 -85656817 + AT_rich Low_complexity Low_complexity 1 24 0 564 116 0 0 chr10 54660177 54660263 -85656502 + (TA)n Simple_repeat Simple_repeat 1 86 0 2040 81 7 0 chr10 54661290 54661563 -85655202 + AluY SINE Alu 17 291 -20 230 204 0 37 chr10 54663342 54663396 -85653369 - L1ME LINE L1 -585 5579 5528 638 264 109 60 chr10 54664206 54665209 -85651556 - L1ME3A LINE L1 -5 6165 5123 440 113 0 0 chr10 54665867 54665929 -85650836 + Alu SINE Alu 235 296 -15 237 65 0 0 chr10 54665982 54666013 -85650752 + (TA)n Simple_repeat Simple_repeat 2 32 0 412 270 60 43 chr10 54667103 54667336 -85649429 - L1ME4a LINE L1 -77 6044 5808 1232 204 53 11 chr10 54667969 54668254 -85648511 - AluJb SINE Alu -15 297 1 2345 70 0 29 chr10 54668314 54668629 -85648136 - AluY SINE Alu -5 306 1 194 288 136 15 chr10 54669194 54669326 -85647439 - L3 LINE CR1 -1228 349 202 204 40 0 0 chr10 54669395 54669420 -85647345 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 212 307 85 46 chr10 54669642 54669795 -85646970 + MIR SINE MIR 104 262 0 22 80 0 0 chr10 54670880 54670930 -85645835 + AT_rich Low_complexity Low_complexity 1 50 0 222 309 111 0 chr10 54670965 54671046 -85645719 + L2 LINE L2 3223 3312 -1 2681 185 60 13 chr10 54673757 54674291 -85642474 + LTR69 LTR ERVL 22 580 -8 248 281 295 29 chr10 54674827 54675037 -85641728 + L2 LINE L2 3009 3274 -39 392 0 0 20 chr10 54675089 54675138 -85641627 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 22 88 0 0 chr10 54676710 54676767 -85639998 + AT_rich Low_complexity Low_complexity 1 57 0 26 30 0 0 chr10 54677056 54677089 -85639676 + AT_rich Low_complexity Low_complexity 1 33 0 239 86 0 0 chr10 54678342 54678377 -85638388 - Alu SINE Alu -10 292 258 1585 115 3 149 chr10 54678630 54678979 -85637786 - AluSp SINE Alu -5 298 1 202 143 0 24 chr10 54679401 54679443 -85637322 + (TAA)n Simple_repeat Simple_repeat 1 41 0 844 388 5 14 chr10 54679850 54680296 -85636469 + L1PA16 LINE L1 3 444 -6343 337 380 71 40 chr10 54680387 54680613 -85636152 + L1M2 LINE L1 682 914 -5935 465 260 46 6 chr10 54681615 54681788 -85634977 + L1PA16 LINE L1 1362 1541 -5257 1653 186 64 22 chr10 54681790 54682312 -85634453 + MLT2A2 LTR ERVL 1 554 0 11653 248 23 18 chr10 54682312 54684187 -85632578 + L1PA16 LINE L1 1633 3498 -3299 279 54 0 0 chr10 54684187 54684224 -85632541 + (CA)n Simple_repeat Simple_repeat 2 38 0 11653 248 23 18 chr10 54684224 54686507 -85630258 + L1PA16 LINE L1 3498 5826 -971 1051 167 43 5 chr10 54686500 54686710 -85630055 + L1PA16 LINE L1 6333 6550 -267 * 215 283 0 91 chr10 54688330 54688429 -85628336 + L2 LINE L2 3182 3271 -1 416 292 67 48 chr10 54688796 54689005 -85627760 - L2 LINE L2 0 3313 3101 26 30 0 0 chr10 54689197 54689230 -85627535 + AT_rich Low_complexity Low_complexity 1 33 0 1901 138 3 10 chr10 54689254 54689559 -85627206 - AluSx SINE Alu -9 303 1 332 122 7 27 chr10 54689504 54689574 -85627191 - Alu SINE Alu -250 53 1 325 16 47 31 chr10 54690034 54690098 -85626667 + (TA)n Simple_repeat Simple_repeat 1 65 0 386 270 62 67 chr10 54691109 54691656 -85625109 + L1ME LINE L1 2765 3402 -2744 206 282 77 0 chr10 54691817 54691895 -85624870 + L2 LINE L2 2889 2972 -342 2777 120 14 5 chr10 54691910 54692343 -85624422 + L1PA13 LINE L1 5721 6157 -6 521 323 28 28 chr10 54692348 54692599 -85624166 + L2 LINE L2 3041 3291 -22 369 0 0 0 chr10 54692663 54692704 -85624061 + (TG)n Simple_repeat Simple_repeat 2 42 0 439 309 94 12 chr10 54692779 54693193 -85623572 + L1ME LINE L1 3857 4304 -1842 666 292 43 34 chr10 54693297 54693530 -85623235 - MIR SINE MIR -21 241 7 413 310 39 21 chr10 54693977 54694558 -85622207 + L1ME LINE L1 4922 5512 -652 401 297 114 36 chr10 54694578 54694797 -85621968 + L1ME LINE L1 5564 5799 -322 337 272 61 85 chr10 54695063 54695309 -85621456 + MLT1I LTR MaLR 168 407 -2 614 187 30 76 chr10 54695504 54695702 -85621063 + MER53 DNA DNA 1 189 0 628 281 179 15 chr10 54695844 54696118 -85620647 - L2 LINE L2 -782 2532 2214 239 336 68 7 chr10 54696150 54696296 -85620469 - MIR SINE MIR 0 262 108 39 0 0 0 chr10 54698963 54699002 -85617763 + AT_rich Low_complexity Low_complexity 1 39 0 183 246 0 0 chr10 54699036 54699093 -85617672 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 564 242 174 0 chr10 54700198 54700359 -85616406 + MER5A DNA MER1_type 1 189 0 216 122 49 0 chr10 54700361 54700402 -85616363 + GA-rich Low_complexity Low_complexity 2 44 0 183 42 0 0 chr10 54701568 54701592 -85615173 + (CTAG)n Simple_repeat Simple_repeat 1 24 0 1343 206 62 11 chr10 54701886 54702181 -85614584 - AluJo SINE Alu 0 309 1 204 324 14 0 chr10 54703126 54703200 -85613565 - L2 LINE L2 -5 3267 3193 5757 148 45 4 chr10 54703215 54704394 -85612371 + L1MA6 LINE L1 5062 6300 0 1922 116 27 10 chr10 54704675 54704968 -85611797 - AluSx SINE Alu -14 298 1 1964 143 7 0 chr10 54706088 54706374 -85610391 + AluSg SINE Alu 1 288 -22 16179 128 17 23 chr10 54706451 54709075 -85607690 + L1PA6 LINE L1 13 2619 -3527 19204 80 5 0 chr10 54709087 54712518 -85604247 + L1PA6 LINE L1 2704 6149 -5 485 277 32 27 chr10 54712907 54713095 -85603670 + L1MC5 LINE L1 7719 7907 -54 1569 113 80 0 chr10 54713183 54713422 -85603343 + LTR12 LTR ERV1 1 258 -456 278 274 34 17 chr10 54713422 54713539 -85603226 + LTR30 LTR ERV1 524 642 -80 1615 136 6 3 chr10 54713540 54713796 -85602969 + LTR12 LTR ERV1 159 714 0 13822 116 10 12 chr10 54713797 54713909 -85602856 + HERV9 LTR ERV1 58 169 -8230 2718 10 0 3 chr10 54713909 54714216 -85602549 + AluYa5 SINE Alu 1 306 -5 13822 116 10 12 chr10 54714216 54716947 -85599818 + HERV9 LTR ERV1 169 2972 -5427 1425 91 10 0 chr10 54716946 54717143 -85599622 + HERV9 LTR ERV1 4756 4954 -3445 * 2305 146 99 111 chr10 54717136 54718028 -85598737 + Harlequin LTR ERV1 840 1720 -5176 * 4660 101 2 0 chr10 54718023 54718665 -85598100 + Harlequin LTR ERV1 7757 8399 0 1753 70 379 193 chr10 54718665 54719267 -85597498 + LTR12 LTR ERV1 1 714 0 201 222 37 74 chr10 54719273 54719327 -85597438 + MER5B DNA MER1_type 63 114 -64 290 302 55 74 chr10 54719623 54719825 -85596940 - LTR16A LTR ERVL -194 256 59 1248 202 108 12 chr10 54720415 54720747 -85596018 + MLT1A1 LTR MaLR 2 365 0 419 189 42 0 chr10 54720916 54721011 -85595754 + L1MA3 LINE L1 6207 6305 0 258 179 0 0 chr10 54721434 54721490 -85595275 + (TA)n Simple_repeat Simple_repeat 2 57 0 613 305 71 38 chr10 54722408 54722794 -85593971 - L2 LINE L2 -246 3067 2638 229 256 51 0 chr10 54723449 54723527 -85593238 + L1MC/D LINE L1 5768 5849 -1959 451 355 97 39 chr10 54723534 54724136 -85592629 - L2 LINE L2 0 3313 2685 1577 189 61 93 chr10 54724322 54724750 -85592015 - MLT2D LTR ERVL 0 414 1 1065 93 0 0 chr10 54725046 54725197 -85591568 + (TA)n Simple_repeat Simple_repeat 1 151 0 325 309 56 39 chr10 54725969 54726147 -85590618 - MIR SINE MIR 0 262 82 1215 74 0 0 chr10 54726697 54726859 -85589906 - L1PA7 LINE L1 -17 6137 5976 21 0 0 0 chr10 54727290 54727311 -85589454 + AT_rich Low_complexity Low_complexity 1 21 0 378 129 0 0 chr10 54727341 54727403 -85589362 + (CA)n Simple_repeat Simple_repeat 2 63 0 2017 137 10 7 chr10 54727558 54727857 -85588908 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr10 54728324 54728344 -85588421 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 33 43 0 0 chr10 54728836 54728883 -85587882 + AT_rich Low_complexity Low_complexity 1 47 0 1562 280 126 6 chr10 54730406 54730924 -85585841 + MLT1G1 LTR MaLR 8 587 -8 182 228 133 89 chr10 54731374 54731554 -85585211 - L3 LINE CR1 -872 705 518 23 78 0 0 chr10 54732109 54732160 -85584605 + AT_rich Low_complexity Low_complexity 1 51 0 312 27 0 0 chr10 54732177 54732214 -85584551 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 71 0 0 chr10 54732544 54732586 -85584179 + AT_rich Low_complexity Low_complexity 1 42 0 5494 124 36 11 chr10 54732592 54733897 -85582868 - L1PA14 LINE L1 -15 6146 4828 268 103 15 29 chr10 54733969 54734037 -85582728 + (TTTTTG)n Simple_repeat Simple_repeat 1 67 0 432 37 0 0 chr10 54734576 54734630 -85582135 + (CA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr10 54735065 54735086 -85581679 + AT_rich Low_complexity Low_complexity 1 21 0 2074 126 10 0 chr10 54735539 54735841 -85580924 + AluSx SINE Alu 1 305 -7 199 286 52 26 chr10 54735885 54735962 -85580803 - MIR SINE MIR -153 109 31 1363 215 61 47 chr10 54736051 54736539 -85580226 + MER67C LTR ERV1 60 508 -6 2208 190 55 2 chr10 54736545 54737019 -85579746 - L1MC3 LINE L1 -159 7626 7128 2087 193 58 14 chr10 54737247 54737711 -85579054 + L1MB5 LINE L1 5668 6147 -27 21 57 0 0 chr10 54737713 54737748 -85579017 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 6 0 chr10 54738589 54738645 -85578120 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 54739032 54739060 -85577705 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 54739200 54739231 -85577534 + AT_rich Low_complexity Low_complexity 1 31 0 536 255 0 9 chr10 54739231 54739362 -85577403 - FLAM_A SINE Alu 0 142 13 256 240 32 24 chr10 54739432 54739557 -85577208 + (TA)n Simple_repeat Simple_repeat 2 127 0 211 204 0 0 chr10 54740119 54740163 -85576602 + A-rich Low_complexity Low_complexity 4 47 0 28 61 0 0 chr10 54740396 54740445 -85576320 + AT_rich Low_complexity Low_complexity 1 49 0 710 272 0 0 chr10 54740560 54740751 -85576014 + L1P LINE L1 3373 3563 -2583 4931 147 53 2 chr10 54740745 54741888 -85574877 + L1PA16 LINE L1 4976 6164 -2 21 36 0 0 chr10 54742253 54742281 -85574484 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 54742472 54742501 -85574264 + AT_rich Low_complexity Low_complexity 1 29 0 1702 170 7 13 chr10 54742527 54742827 -85573938 + AluSx SINE Alu 1 298 -14 1799 165 0 20 chr10 54743514 54743811 -85572954 + AluSx SINE Alu 2 292 -20 956 153 25 0 chr10 54743812 54743969 -85572796 + AluSg/x SINE Alu 138 298 -14 548 241 130 0 chr10 54744093 54744255 -85572510 + MER63A DNA MER1_type 14 196 -14 216 216 0 0 chr10 54744405 54744456 -85572309 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 554 280 92 17 chr10 54744546 54744755 -85572010 - MIR SINE MIR -25 237 19 41 21 0 0 chr10 54745480 54745528 -85571237 + AT_rich Low_complexity Low_complexity 1 48 0 273 186 57 0 chr10 54745575 54745645 -85571120 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 2250 176 37 22 chr10 54745882 54746372 -85570393 - L1MC1 LINE L1 -20 6313 5817 258 317 44 5 chr10 54746824 54746937 -85569828 + MLT1L LTR MaLR 314 528 -87 567 350 0 16 chr10 54747196 54747382 -85569383 - MER5A DNA MER1_type 0 189 7 1835 184 9 9 chr10 54748229 54748577 -85568188 - MER7A DNA MER2_type 0 346 1 276 194 43 43 chr10 54749007 54749100 -85567665 + GA-rich Low_complexity Low_complexity 3 95 0 237 108 0 0 chr10 54749110 54749147 -85567618 + (GA)n Simple_repeat Simple_repeat 1 37 0 182 103 0 51 chr10 54749305 54749344 -85567421 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr10 54749382 54749403 -85567362 + AT_rich Low_complexity Low_complexity 1 21 0 382 335 60 18 chr10 54749812 54749979 -85566786 + MLT1L LTR MaLR 58 231 -384 565 345 38 4 chr10 54750040 54750275 -85566490 + MLT1L LTR MaLR 339 581 -34 416 83 90 13 chr10 54750281 54750437 -85566328 + (TATAA)n Simple_repeat Simple_repeat 5 172 0 186 71 0 0 chr10 54750976 54751004 -85565761 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1743 145 11 18 chr10 54751010 54751292 -85565473 - AluSx SINE Alu -32 280 1 24 0 0 0 chr10 54751394 54751418 -85565347 + AT_rich Low_complexity Low_complexity 1 24 0 409 296 107 24 chr10 54751710 54751879 -85564886 - MER5A DNA MER1_type -6 183 1 288 0 0 0 chr10 54752729 54752761 -85564004 + (CA)n Simple_repeat Simple_repeat 2 33 0 965 147 29 53 chr10 54753296 54753466 -85563299 + MER101B LTR ERV1 1 166 -404 1931 144 54 25 chr10 54753466 54753820 -85562945 + THE1B LTR MaLR 1 364 0 10604 121 9 7 chr10 54753820 54755395 -85561370 + THE1B-int LTR MaLR 1 1579 -1 792 144 0 0 chr10 54755396 54755514 -85561251 + THE1B LTR MaLR 1 118 -257 777 93 0 9 chr10 54755505 54755612 -85561153 + THE1B LTR MaLR 259 364 0 * 1704 179 18 89 chr10 54755612 54756052 -85560713 + MER101B LTR ERV1 162 570 0 1368 161 17 17 chr10 54757123 54757353 -85559412 - MER30 DNA MER1_type 0 230 1 784 197 43 53 chr10 54757462 54757650 -85559115 + MER31A-int LTR ERV1 4724 4909 -27 2611 165 10 8 chr10 54757657 54758141 -85558624 + MER31A LTR ERV1 1 485 0 3754 178 21 21 chr10 54758526 54759229 -85557536 - MER50 LTR ERV1 -23 711 9 1641 169 52 27 chr10 54759231 54759597 -85557168 + THE1C LTR MaLR 1 375 0 9005 149 19 35 chr10 54759599 54761204 -85555561 + THE1C-int LTR MaLR 3 1580 0 1430 203 60 14 chr10 54761206 54761556 -85555209 + THE1C LTR MaLR 3 368 -7 1235 62 0 0 chr10 54761693 54761895 -85554870 + L1PA5 LINE L1 5993 6194 0 198 0 0 0 chr10 54762951 54762973 -85553792 + (A)n Simple_repeat Simple_repeat 1 22 0 191 36 36 0 chr10 54763010 54763038 -85553727 + (TA)n Simple_repeat Simple_repeat 1 29 0 194 316 84 21 chr10 54763180 54763275 -85553490 + MIR SINE MIR 122 222 -40 724 47 0 4 chr10 54763683 54763878 -85552887 + AluY SINE Alu 38 311 0 546 228 19 114 chr10 54765637 54765848 -85550917 - MER102b DNA MER1_type 0 341 151 2442 75 0 0 chr10 54765887 54766194 -85550571 - AluY SINE Alu -4 307 1 1929 157 83 0 chr10 54766619 54767026 -85549739 - L1MA8 LINE L1 -4 6287 5847 452 193 0 45 chr10 54768747 54768835 -85547930 + AluJ/FLAM SINE Alu 1 84 -228 212 81 27 0 chr10 54768847 54768870 -85547895 + (TAGA)n Simple_repeat Simple_repeat 2 28 -11 1992 128 7 14 chr10 54768870 54769167 -85547598 + AluSx SINE Alu 3 297 -15 212 81 27 0 chr10 54769167 54769180 -85547585 + (TAGA)n Simple_repeat Simple_repeat 28 39 0 22 35 0 0 chr10 54769473 54769502 -85547263 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr10 54769543 54769576 -85547189 + AT_rich Low_complexity Low_complexity 1 33 0 888 265 85 6 chr10 54771425 54771747 -85545018 - L1ME2 LINE L1 -6 6160 5804 189 292 90 45 chr10 54771911 54772000 -85544765 + L3b LINE CR1 1251 1343 -240 2196 84 3 7 chr10 54772015 54772331 -85544434 - AluSp SINE Alu 0 315 1 234 0 0 0 chr10 54773167 54773193 -85543572 + (A)n Simple_repeat Simple_repeat 1 26 0 215 325 8 34 chr10 54773203 54773320 -85543445 - MIR SINE MIR -43 219 106 958 271 70 32 chr10 54774035 54774437 -85542328 + L1MC4a LINE L1 7145 7561 -247 281 238 0 0 chr10 54774437 54774500 -85542265 + L1MC4 LINE L1 7815 7877 -165 298 174 28 46 chr10 54774522 54774631 -85542134 + (TA)n Simple_repeat Simple_repeat 2 108 0 597 167 16 234 chr10 54774695 54774821 -85541944 + L1MC3 LINE L1 7425 7419 -366 13229 35 7 0 chr10 54774821 54777219 -85539546 + L1PA3 LINE L1 3758 6154 -1 597 167 16 234 chr10 54777219 54777464 -85539301 + L1MC3 LINE L1 7418 7715 -70 23 33 0 0 chr10 54777506 54777536 -85539229 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 54777652 54777674 -85539091 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 54777969 54777996 -85538769 + AT_rich Low_complexity Low_complexity 1 27 0 2888 172 16 2 chr10 54778043 54778531 -85538234 + LOR1a LTR ERV1 1 495 -2 769 232 164 10 chr10 54779128 54779335 -85537430 + MER8 DNA MER2_type 1 239 0 200 414 10 0 chr10 54779595 54779699 -85537066 - MIR SINE MIR -67 141 37 563 324 24 51 chr10 54779927 54780180 -85536585 + MIR SINE MIR 5 250 -12 21 36 0 0 chr10 54780385 54780413 -85536352 + AT_rich Low_complexity Low_complexity 1 28 0 340 247 169 13 chr10 54781156 54781310 -85535455 - L2 LINE L2 -18 3295 3118 216 291 13 76 chr10 54781425 54781504 -85535261 - MIR SINE MIR -89 173 100 628 309 41 12 chr10 54781566 54781834 -85534931 - L1ME LINE L1 -424 5746 5472 25 0 0 0 chr10 54781850 54781875 -85534890 + AT_rich Low_complexity Low_complexity 1 25 0 226 239 72 90 chr10 54781921 54781980 -85534785 - L1ME LINE L1 -1778 4368 4309 2229 82 17 3 chr10 54781980 54782272 -85534493 + AluSp SINE Alu 4 299 -14 226 239 72 90 chr10 54782272 54782379 -85534386 - L1ME LINE L1 -1837 4309 4205 359 328 43 23 chr10 54782395 54782694 -85534071 - L1ME LINE L1 -3284 2862 2558 1387 241 130 63 chr10 54782701 54783224 -85533541 - MLT1E2 LTR MaLR 0 626 69 388 306 54 14 chr10 54783254 54783401 -85533364 + MIR SINE MIR 96 248 -14 21 0 0 0 chr10 54783407 54783428 -85533337 + AT_rich Low_complexity Low_complexity 1 21 0 212 367 101 0 chr10 54784104 54784213 -85532552 + MIR3 SINE MIR 14 133 -75 2277 52 7 3 chr10 54785553 54785842 -85530923 + L1PA7 LINE L1 5841 6130 -24 333 118 0 0 chr10 54785845 54785896 -85530869 + (TA)n Simple_repeat Simple_repeat 2 52 0 24 53 0 0 chr10 54786933 54786971 -85529794 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 54787421 54787443 -85529322 + AT_rich Low_complexity Low_complexity 1 22 0 389 314 148 12 chr10 54787735 54788146 -85528619 - L1ME4a LINE L1 -19 6102 5636 249 308 19 39 chr10 54788149 54788253 -85528512 - MIR SINE MIR -149 113 12 330 272 71 83 chr10 54788312 54788566 -85528199 + L2 LINE L2 3025 3275 -38 398 303 57 8 chr10 54788571 54788693 -85528072 + MIR SINE MIR 32 159 -103 26 0 0 0 chr10 54788771 54788797 -85527968 + AT_rich Low_complexity Low_complexity 1 26 0 710 353 93 23 chr10 54788840 54789401 -85527364 + L3 LINE CR1 399 998 -579 256 293 91 45 chr10 54789483 54789681 -85527084 + L3 LINE CR1 1198 1404 -173 336 154 92 0 chr10 54789683 54789748 -85527017 + L1MA3 LINE L1 6230 6300 -5 21 57 0 0 chr10 54790125 54790160 -85526605 + AT_rich Low_complexity Low_complexity 1 35 0 182 36 0 36 chr10 54792749 54792777 -85523988 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 189 147 39 20 chr10 54793813 54793915 -85522850 + (TA)n Simple_repeat Simple_repeat 2 105 0 1905 145 3 3 chr10 54793945 54794241 -85522524 - AluSx SINE Alu -16 296 1 27 73 0 0 chr10 54794364 54794419 -85522346 + AT_rich Low_complexity Low_complexity 1 55 0 24 53 0 0 chr10 54794733 54794771 -85521994 + AT_rich Low_complexity Low_complexity 1 38 0 282 274 75 48 chr10 54794888 54795339 -85521426 + L1ME4a LINE L1 5639 6114 -7 22 0 0 0 chr10 54795913 54795935 -85520830 + AT_rich Low_complexity Low_complexity 1 22 0 1404 200 3 33 chr10 54795974 54796274 -85520491 - AluJo SINE Alu -11 291 1 27 0 0 0 chr10 54797162 54797189 -85519576 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr10 54798120 54798155 -85518610 + AT_rich Low_complexity Low_complexity 1 35 0 274 138 0 31 chr10 54798682 54798747 -85518018 + (TA)n Simple_repeat Simple_repeat 2 64 0 268 206 0 15 chr10 54798752 54798820 -85517945 - LTR66 LTR ERVL -171 439 373 262 218 148 10 chr10 54799637 54799738 -85517027 + L1M4 LINE L1 2305 2419 -3727 221 353 10 20 chr10 54799880 54799982 -85516783 + MIR SINE MIR 11 111 -151 981 253 22 9 chr10 54800724 54800949 -85515816 + MLT1E LTR MaLR 366 593 0 363 60 0 0 chr10 54801661 54801711 -85515054 + (TG)n Simple_repeat Simple_repeat 2 51 0 1779 132 7 51 chr10 54801862 54802180 -85514585 - AluSx SINE Alu 0 305 1 22 35 0 0 chr10 54803166 54803195 -85513570 + AT_rich Low_complexity Low_complexity 1 29 0 829 226 37 0 chr10 54803936 54804146 -85512619 - L1 LINE L1 -1666 4480 4279 387 0 0 0 chr10 54804146 54804189 -85512576 + (TG)n Simple_repeat Simple_repeat 2 44 0 829 226 37 0 chr10 54804189 54804202 -85512563 - L1 LINE L1 -1867 4279 4268 1343 136 17 38 chr10 54804202 54804437 -85512328 + MER30 DNA MER1_type 1 230 0 829 226 37 0 chr10 54804437 54804455 -85512310 - L1 LINE L1 -1878 4268 4229 23 54 0 0 chr10 54804521 54804558 -85512207 + AT_rich Low_complexity Low_complexity 1 37 0 1283 158 45 6 chr10 54804627 54804929 -85511836 + L1MA8 LINE L1 5258 5547 -744 1283 150 53 0 chr10 54804929 54805175 -85511590 + L1MA8 LINE L1 6027 6285 -6 1283 158 45 6 chr10 54805175 54805550 -85511215 + L1MA8 LINE L1 5547 6285 -6 1862 157 42 0 chr10 54805638 54805950 -85510815 + LOR1b LTR ERV1 137 461 0 1095 161 47 5 chr10 54805950 54806161 -85510604 + L1MB3 LINE L1 5918 6137 -46 433 347 30 57 chr10 54806210 54806703 -85510062 - ERVL LTR ERVL -708 5056 4577 259 219 16 16 chr10 54807065 54807129 -85509636 + L1ME2 LINE L1 4693 4756 -1390 303 28 0 0 chr10 54807129 54807165 -85509600 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 467 242 5 135 chr10 54807179 54807394 -85509371 - MER58C DNA MER1_type -1 214 28 947 279 97 10 chr10 54807455 54807938 -85508827 + L1ME2 LINE L1 4878 5402 -744 694 244 59 42 chr10 54807936 54808180 -85508585 + L1ME2 LINE L1 5913 6157 -9 * 1989 139 10 0 chr10 54808582 54808885 -85507880 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 54808968 54808989 -85507776 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 54809229 54809250 -85507515 + AT_rich Low_complexity Low_complexity 1 21 0 1951 170 33 19 chr10 54809715 54810074 -85506691 + THE1B LTR MaLR 1 364 0 232 355 54 0 chr10 54810082 54810248 -85506517 + LTR67 LTR ERVL 381 555 -2 872 234 68 79 chr10 54810483 54810838 -85505927 + MLT1A2 LTR MaLR 24 374 0 218 179 0 0 chr10 54811828 54811867 -85504898 + (TG)n Simple_repeat Simple_repeat 1 39 0 571 298 107 10 chr10 54812247 54812452 -85504313 + MIR SINE MIR 32 256 -6 203 253 13 0 chr10 54813071 54813150 -85503615 + (TA)n Simple_repeat Simple_repeat 2 81 0 1045 128 0 0 chr10 54813595 54813751 -85503014 - AluSc SINE Alu -19 290 135 305 346 39 8 chr10 54813891 54814018 -85502747 + L2 LINE L2 3142 3272 0 185 313 12 25 chr10 54814171 54814251 -85502514 + MER5A DNA MER1_type 1 79 -110 771 139 0 0 chr10 54814587 54814709 -85502056 - L1PB4 LINE L1 -183 5973 5852 580 186 18 0 chr10 54814693 54814806 -85501959 + L1PB4 LINE L1 5951 6065 -91 * 21 98 0 0 chr10 54814819 54814870 -85501895 + GC_rich Low_complexity Low_complexity 1 51 0 49 0 0 0 chr10 54814911 54814960 -85501805 + GC_rich Low_complexity Low_complexity 1 49 0 270 0 0 0 chr10 54815296 54815326 -85501439 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2039 83 0 11 chr10 54815330 54815607 -85501158 - AluY SINE Alu -37 274 1 319 301 171 10 chr10 54816667 54816860 -85499905 - LTR33 LTR ERVL -297 224 1 1817 149 9 22 chr10 54817195 54817510 -85499255 + AluSx SINE Alu 1 311 -1 2181 126 0 0 chr10 54817629 54817931 -85498834 + AluSx SINE Alu 1 302 -10 248 157 11 67 chr10 54818997 54819086 -85497679 + GA-rich Low_complexity Low_complexity 1 84 0 8414 63 2 4 chr10 54819297 54820369 -85496396 - MER11C LTR ERVK 0 1071 2 192 40 0 0 chr10 54820442 54820467 -85496298 + (CA)n Simple_repeat Simple_repeat 2 26 0 794 222 83 0 chr10 54820468 54820648 -85496117 + MER6B DNA MER2_type 4 198 -12 297 118 0 0 chr10 54820652 54820703 -85496062 + (CA)n Simple_repeat Simple_repeat 2 52 0 3171 127 25 32 chr10 54820960 54821520 -85495245 + MER34B LTR ERV1 4 559 -6 1588 212 113 48 chr10 54822066 54822543 -85494222 + MER67D LTR ERV1 2 509 -5 21 0 0 0 chr10 54822598 54822619 -85494146 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 54823173 54823211 -85493554 + AT_rich Low_complexity Low_complexity 1 38 0 34 24 0 0 chr10 54824282 54824323 -85492442 + AT_rich Low_complexity Low_complexity 1 41 0 218 214 36 0 chr10 54825820 54825876 -85490889 + GA-rich Low_complexity Low_complexity 1 58 0 233 261 186 19 chr10 54826616 54826777 -85489988 + L1M4 LINE L1 4466 4653 -1493 1087 260 123 23 chr10 54826810 54827461 -85489304 + L1M4 LINE L1 3530 4245 -1901 4709 172 19 19 chr10 54827463 54828353 -85488412 + Tigger1 DNA MER2_type 1 890 -1528 302 133 0 0 chr10 54828353 54828398 -85488367 + L1P LINE L1 3888 3932 -2214 219 283 0 22 chr10 54828513 54828605 -85488160 + GA-rich Low_complexity Low_complexity 3 92 0 1582 149 3 90 chr10 54829094 54829285 -85487480 - AluJb SINE Alu -18 294 141 5929 103 38 0 chr10 54829285 54830183 -85486582 - L1PA8A LINE L1 -13 6118 5213 1582 149 3 90 chr10 54830183 54830312 -85486453 - AluJb SINE Alu -171 141 2 581 275 42 6 chr10 54831030 54831197 -85485568 - FAM SINE Alu -2 173 1 33 25 0 0 chr10 54831471 54831511 -85485254 + AT_rich Low_complexity Low_complexity 1 40 0 27 62 0 0 chr10 54831802 54831850 -85484915 + AT_rich Low_complexity Low_complexity 1 48 0 21 71 0 0 chr10 54832144 54832186 -85484579 + AT_rich Low_complexity Low_complexity 1 42 0 231 167 0 0 chr10 54832343 54832385 -85484380 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 537 346 86 32 chr10 54833433 54833888 -85482877 - L2 LINE L2 -274 3039 2553 24 0 0 0 chr10 54833973 54833997 -85482768 + AT_rich Low_complexity Low_complexity 1 24 0 42 77 0 0 chr10 54834572 54834663 -85482102 + AT_rich Low_complexity Low_complexity 1 91 0 312 237 11 54 chr10 54834789 54834882 -85481883 - L1MC4 LINE L1 -1339 6703 6615 236 111 0 56 chr10 54834928 54834982 -85481783 + LTR66 LTR ERVL 389 439 -171 302 230 11 35 chr10 54834982 54835069 -85481696 - L1MC4 LINE L1 -1343 6699 6615 * 304 263 0 32 chr10 54834995 54835090 -85481675 + L1MC4 LINE L1 6614 6705 -1337 744 273 65 17 chr10 54835332 54835563 -85481202 + MIR SINE MIR 21 262 0 660 243 132 5 chr10 54835630 54835819 -85480946 - MER20 DNA MER1_type -4 215 3 7078 50 7 0 chr10 54836906 54838144 -85478621 + L1PA5 LINE L1 4915 6154 0 1559 188 51 30 chr10 54838256 54838591 -85478174 + MSTC LTR MaLR 1 342 -86 703 171 34 7 chr10 54838711 54838857 -85477908 + MSTC LTR MaLR 279 428 0 2003 160 6 6 chr10 54839536 54839873 -85476892 - MER1B DNA MER1_type 0 337 1 219 259 19 0 chr10 54840230 54840284 -85476481 - MIR SINE MIR -6 256 202 2266 102 3 0 chr10 54840573 54840877 -85475888 - AluSp SINE Alu -8 305 1 305 342 60 69 chr10 54841357 54841646 -85475119 + LTR16A1 LTR ERVL 1 288 -162 545 203 141 6 chr10 54841646 54841809 -85474956 - MER53 DNA DNA -2 187 3 305 342 60 69 chr10 54841809 54841886 -85474879 + LTR16A1 LTR ERVL 288 364 -86 13062 171 44 20 chr10 54841929 54843349 -85473416 + L1MA2 LINE L1 2679 4062 -3661 2123 128 3 0 chr10 54843349 54843654 -85473111 - AluSx SINE Alu -6 306 1 13062 171 44 20 chr10 54843654 54847149 -85469616 + L1MA2 LINE L1 4062 7723 0 4498 149 73 11 chr10 54847150 54848000 -85468765 + Tigger3b DNA MER2_type 329 1231 0 187 411 64 36 chr10 54848444 54848724 -85468041 + L2 LINE L2 2805 3092 -180 2394 84 0 0 chr10 54848993 54849301 -85467464 + AluY SINE Alu 4 311 0 286 85 0 34 chr10 54849301 54849355 -85467410 + (GGAGA)n Simple_repeat Simple_repeat 5 56 0 724 132 16 0 chr10 54849358 54849487 -85467278 + GA-rich Low_complexity Low_complexity 3 133 0 603 150 67 8 chr10 54850668 54850788 -85465977 + Tigger3(Golem) DNA MER2_type 2518 2644 -385 207 0 0 0 chr10 54851602 54851625 -85465140 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr10 54855716 54855737 -85461028 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr10 54855749 54855795 -85460970 + (TA)n Simple_repeat Simple_repeat 1 46 0 25 51 0 0 chr10 54855800 54855839 -85460926 + AT_rich Low_complexity Low_complexity 1 39 0 203 263 66 13 chr10 54856738 54856814 -85459951 - MIR SINE MIR -8 254 175 22 0 0 0 chr10 54856842 54856864 -85459901 + AT_rich Low_complexity Low_complexity 1 22 0 218 274 55 41 chr10 54857609 54857682 -85459083 - MER91C DNA MER1_type -24 116 43 605 146 18 0 chr10 54859903 54860013 -85456752 - L1MA8 LINE L1 0 6291 6180 1971 179 3 19 chr10 54860541 54860916 -85455849 - L1MA8 LINE L1 -114 6177 5809 472 224 40 85 chr10 54862280 54862503 -85454262 + LTR52 LTR ERVL 1 213 -208 261 271 0 43 chr10 54862789 54862859 -85453906 - MER2 DNA MER2_type -24 321 255 1238 165 8 77 chr10 54862964 54863225 -85453540 - MER2 DNA MER2_type -99 246 4 246 32 0 0 chr10 54863460 54863491 -85453274 + (TA)n Simple_repeat Simple_repeat 1 31 0 922 19 0 0 chr10 54863491 54863596 -85453169 - L1PA5 LINE L1 -15 6139 6035 22 35 0 0 chr10 54863744 54863773 -85452992 + AT_rich Low_complexity Low_complexity 1 29 0 392 289 9 9 chr10 54865185 54865299 -85451466 - L3 LINE CR1 -276 1301 1188 419 136 15 0 chr10 54865779 54865845 -85450920 - U6 snRNA snRNA -37 70 4 1465 199 71 64 chr10 54866218 54866365 -85450400 + MLT1C LTR MaLR 12 157 -310 5283 35 2 0 chr10 54866365 54866998 -85449767 + L1PA4 LINE L1 5520 6153 -2 1465 199 71 64 chr10 54866998 54867303 -85449462 + MLT1C LTR MaLR 157 467 0 341 258 22 11 chr10 54867342 54867520 -85449245 + (TA)n Simple_repeat Simple_repeat 1 180 0 81 21 0 0 chr10 54867742 54867837 -85448928 + AT_rich Low_complexity Low_complexity 1 95 0 2500 123 5 0 chr10 54868198 54868571 -85448194 + THE1C LTR MaLR 1 375 0 8168 151 99 8 chr10 54868573 54870020 -85446745 + THE1C-int LTR MaLR 3 1580 0 2218 148 25 0 chr10 54870020 54870386 -85446379 + THE1C LTR MaLR 1 375 0 22 35 0 0 chr10 54871018 54871047 -85445718 + AT_rich Low_complexity Low_complexity 1 29 0 464 281 45 45 chr10 54872076 54872230 -85444535 + MIR SINE MIR 2 158 -104 2713 196 28 42 chr10 54872230 54872842 -85443923 + MER6A DNA MER2_type 1 603 -2 464 281 45 45 chr10 54872842 54872886 -85443879 + MIR SINE MIR 157 200 -62 285 320 170 0 chr10 54873543 54873643 -85443122 - L2 LINE L2 0 3272 3156 262 344 29 86 chr10 54873710 54874201 -85442564 - L2 LINE L2 -562 2752 2290 267 250 26 69 chr10 54874990 54875106 -85441659 + MIR SINE MIR 87 197 -65 209 59 59 0 chr10 54875796 54875830 -85440935 + T-rich Low_complexity Low_complexity 2 37 0 1837 126 9 62 chr10 54875832 54876157 -85440608 - AluSg SINE Alu 0 310 3 242 353 20 0 chr10 54876717 54876819 -85439946 - MIR SINE MIR -72 136 33 274 371 43 0 chr10 54876979 54877095 -85439670 + L2 LINE L2 3141 3261 -11 220 327 26 65 chr10 54877131 54877284 -85439481 - L2 LINE L2 -208 3064 2918 1075 265 29 40 chr10 54877650 54878095 -85438670 - LTR37B LTR ERV1 -11 457 18 11957 198 54 21 chr10 54878457 54882430 -85434335 - L1MA4A LINE L1 -9 6996 2921 1770 163 14 0 chr10 54882430 54882719 -85434046 - AluSx SINE Alu -13 299 7 11957 198 54 21 chr10 54882719 54882818 -85433947 - L1MA4A LINE L1 -4084 2921 2827 5646 270 39 16 chr10 54882849 54884245 -85432520 - L1MA4A LINE L1 -5421 1428 1 1968 214 28 21 chr10 54884275 54884701 -85432064 - Tigger2a DNA MER2_type -5 429 1 32 26 0 0 chr10 54884953 54884992 -85431773 + AT_rich Low_complexity Low_complexity 1 39 0 244 283 17 0 chr10 54885857 54885917 -85430848 - L2 LINE L2 -4 3309 3249 23 0 0 0 chr10 54885970 54885993 -85430772 + AT_rich Low_complexity Low_complexity 1 23 0 243 263 32 74 chr10 54887626 54887721 -85429044 - MIR SINE MIR -115 147 57 459 238 42 28 chr10 54889553 54889696 -85427069 - MER112 DNA MER1_type -110 150 6 299 329 51 112 chr10 54890311 54890667 -85426098 + L2 LINE L2 2938 3271 -1 1529 160 71 34 chr10 54890675 54890969 -85425796 - AluSx SINE Alu -7 305 1 27 29 0 0 chr10 54891080 54891114 -85425651 + AT_rich Low_complexity Low_complexity 1 34 0 194 91 30 0 chr10 54892088 54892121 -85424644 + GA-rich Low_complexity Low_complexity 2 35 0 224 196 22 0 chr10 54894095 54894141 -85422624 + MIR3 SINE MIR 161 207 -1 22 56 0 0 chr10 54894406 54894442 -85422323 + AT_rich Low_complexity Low_complexity 1 36 0 256 241 143 9 chr10 54894721 54894833 -85421932 + L1ME4a LINE L1 5974 6100 -21 23 54 0 0 chr10 54894880 54894917 -85421848 + AT_rich Low_complexity Low_complexity 1 37 0 309 288 18 88 chr10 54895638 54895808 -85420957 + HAL1 LINE L1 241 398 -2109 21 0 0 0 chr10 54896243 54896264 -85420501 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 54896452 54896475 -85420290 + AT_rich Low_complexity Low_complexity 1 23 0 214 326 206 0 chr10 54896882 54897057 -85419708 - MIR SINE MIR -46 216 6 289 98 0 49 chr10 54899632 54899693 -85417072 + (TTTC)n Simple_repeat Simple_repeat 2 59 0 449 358 60 29 chr10 54899725 54900105 -85416660 + MLT1J LTR MaLR 36 427 -84 1798 197 5 3 chr10 54900219 54900590 -85416175 + L1PB4 LINE L1 5783 6154 -2 30 0 0 0 chr10 54901144 54901174 -85415591 + AT_rich Low_complexity Low_complexity 1 30 0 182 91 30 0 chr10 54902676 54902709 -85414056 + (CATA)n Simple_repeat Simple_repeat 2 35 0 243 0 0 0 chr10 54902932 54902959 -85413806 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 2295 81 0 0 chr10 54903255 54903582 -85413183 + AluY SINE Alu 1 327 0 39 0 0 0 chr10 54903588 54903627 -85413138 + AT_rich Low_complexity Low_complexity 1 39 0 243 335 136 13 chr10 54903675 54903830 -85412935 + MER5B DNA MER1_type 5 178 0 201 154 0 0 chr10 54904395 54904434 -85412331 + A-rich Low_complexity Low_complexity 1 39 0 861 232 18 0 chr10 54905573 54905741 -85411024 + Tigger7 DNA MER2_type 1 171 -2316 1620 143 18 21 chr10 54905745 54905907 -85410858 + Tigger7 DNA MER2_type 2309 2471 -116 2182 119 54 25 chr10 54905907 54906261 -85410504 - THE1B LTR MaLR 0 364 1 1620 143 18 21 chr10 54906261 54906378 -85410387 + Tigger7 DNA MER2_type 2471 2587 0 2357 212 71 44 chr10 54906654 54906726 -85410039 + MER92B LTR ERV1 1 70 -566 5022 38 2 3 chr10 54906726 54907338 -85409427 + L1PA3 LINE L1 5545 6155 0 2357 212 71 44 chr10 54907338 54907883 -85408882 + MER92B LTR ERV1 70 635 -1 277 291 82 45 chr10 54908454 54908588 -85408177 + MIR SINE MIR 122 260 -2 306 309 119 25 chr10 54909432 54909683 -85407082 + MLT1L LTR MaLR 227 522 -35 261 246 63 48 chr10 54909846 54909972 -85406793 - L1MC5 LINE L1 -37 7924 7797 5322 257 18 17 chr10 54910080 54911832 -85404933 + L1PA13 LINE L1 1322 3090 -3707 2294 101 146 8 chr10 54911832 54912208 -85404557 - MSTA LTR MaLR 0 428 1 5322 257 18 17 chr10 54912208 54912942 -85403823 + L1PA13 LINE L1 3090 3822 -2975 3227 166 15 5 chr10 54912958 54913554 -85403211 + L1PA16 LINE L1 5565 6166 0 1781 155 25 4 chr10 54913634 54913911 -85402854 + AluSx SINE Alu 1 283 -29 3331 55 9 0 chr10 54913911 54914333 -85402432 + L1PA7 LINE L1 5729 6154 0 24 85 0 0 chr10 54914840 54914899 -85401866 + AT_rich Low_complexity Low_complexity 1 59 0 207 204 0 0 chr10 54915105 54915149 -85401616 + CT-rich Low_complexity Low_complexity 2 45 0 324 292 36 36 chr10 54915264 54915401 -85401364 + MIR SINE MIR 124 260 -2 276 395 8 8 chr10 54915405 54915539 -85401226 + L2 LINE L2 2820 2953 -361 260 365 17 26 chr10 54915611 54915726 -85401039 + L2 LINE L2 3156 3269 -3 360 0 0 0 chr10 54916298 54916311 -85400454 + (TG)n Simple_repeat Simple_repeat 1 53 0 360 0 0 0 chr10 54916311 54916351 -85400414 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 383 9 17 chr10 54917156 54917271 -85399494 - MER5B DNA MER1_type -1 177 64 180 111 0 0 chr10 54917790 54917817 -85398948 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2166 67 0 0 chr10 54918608 54918892 -85397873 + L1PA7 LINE L1 5869 6152 -2 226 179 45 15 chr10 54920389 54920456 -85396309 + (TA)n Simple_repeat Simple_repeat 2 70 0 427 307 57 36 chr10 54920671 54920863 -85395902 - MIR SINE MIR -56 206 11 182 250 23 0 chr10 54920905 54920949 -85395816 + MIR SINE MIR 98 142 -66 266 315 173 25 chr10 54921043 54921205 -85395560 - MIR SINE MIR 0 262 77 2222 183 38 18 chr10 54921478 54921887 -85394878 - Tigger5 DNA MER2_type 0 2323 1903 1629 158 121 0 chr10 54921887 54922209 -85394556 - MER46B DNA MER2_type 0 236 1 2222 183 38 18 chr10 54922209 54922247 -85394518 - Tigger5 DNA MER2_type -420 1903 1867 1295 120 21 0 chr10 54922251 54922442 -85394323 + THE1C LTR MaLR 1 195 -180 290 184 0 66 chr10 54922699 54922775 -85393990 - Tigger5 DNA MER2_type -1019 1304 1234 541 306 71 21 chr10 54922855 54923136 -85393629 + ERVL LTR ERVL 3764 4058 -1706 863 306 48 3 chr10 54923157 54923448 -85393317 + ERVL LTR ERVL 5120 5423 -341 269 341 36 30 chr10 54923621 54923788 -85392977 + ERVL LTR ERVL 5595 5762 -2 273 301 11 11 chr10 54924002 54924095 -85392670 + MLT2E LTR ERVL 208 300 -328 387 0 0 0 chr10 54925012 54925055 -85391710 + (TG)n Simple_repeat Simple_repeat 2 44 0 28 0 0 0 chr10 54925675 54925703 -85391062 + AT_rich Low_complexity Low_complexity 1 28 0 1021 148 0 0 chr10 54925894 54926079 -85390686 - AluSg/x SINE Alu 0 318 134 296 291 82 18 chr10 54926422 54926532 -85390233 - L2 LINE L2 -1 3312 3196 43272 40 1 14 chr10 54927638 54933878 -85382887 + L1PA4 LINE L1 1 6155 0 1681 181 0 23 chr10 54937066 54937365 -85379400 - AluSx SINE Alu -10 302 11 25 31 0 0 chr10 54939624 54939656 -85377109 + AT_rich Low_complexity Low_complexity 1 32 0 195 280 119 84 chr10 54940957 54941100 -85375665 + L2 LINE L2 2596 2743 -571 183 369 73 62 chr10 54941880 54942140 -85374625 + L2 LINE L2 2967 3229 -43 274 358 63 78 chr10 54943339 54943993 -85372772 + L2 LINE L2 2218 2861 -453 259 339 42 0 chr10 54944093 54944211 -85372554 + L2 LINE L2 3184 3306 -7 3085 170 39 14 chr10 54944323 54944887 -85371878 + MER6A DNA MER2_type 1 578 -27 326 296 93 41 chr10 54945047 54945219 -85371546 + MIR SINE MIR 47 227 -35 23 54 0 0 chr10 54946430 54946467 -85370298 + AT_rich Low_complexity Low_complexity 1 37 0 2509 68 0 0 chr10 54946553 54946861 -85369904 + AluY SINE Alu 1 308 -3 441 268 21 42 chr10 54947237 54947379 -85369386 + MIR SINE MIR 5 143 -119 1448 225 9 9 chr10 54947609 54947621 -85369144 + L1 LINE L1 3559 3570 -2576 2618 182 20 25 chr10 54947621 54948113 -85368652 - L1PA16 LINE L1 -9 6157 5667 2397 59 7 3 chr10 54948113 54948420 -85368345 - AluY SINE Alu -3 308 1 2618 182 20 25 chr10 54948420 54948477 -85368288 - L1PA16 LINE L1 -499 5667 5611 1448 225 9 9 chr10 54948477 54948798 -85367967 + L1 LINE L1 3569 3892 -2254 * 2618 183 36 4 chr10 54948796 54949683 -85367082 - L1PA16 LINE L1 -564 5602 4685 966 210 129 13 chr10 54949688 54950010 -85366755 + MSTA LTR MaLR 6 364 0 1078 212 27 4 chr10 54950010 54950269 -85366496 - L1 LINE L1 -1457 4689 4425 7205 245 22 28 chr10 54950277 54952464 -85364301 + L1 LINE L1 2161 4334 -1812 3471 120 83 84 chr10 54953861 54954646 -85362119 + LTR1 LTR ERV1 1 784 -1 2255 193 24 4 chr10 54954740 54955192 -85361573 + MER65C LTR ERV1 1 461 0 23 0 10 0 chr10 54956563 54956629 -85360136 + AT_rich Low_complexity Low_complexity 1 23 0 277 105 0 35 chr10 54956656 54956713 -85360052 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 608 298 82 31 chr10 54958619 54959166 -85357599 - L1ME3A LINE L1 -223 5947 5373 493 40 0 26 chr10 54959173 54959249 -85357516 + AluY SINE Alu 238 311 -1 290 143 44 0 chr10 54959252 54959343 -85357422 + (TA)n Simple_repeat Simple_repeat 1 95 0 381 123 65 13 chr10 54959650 54959804 -85356961 + (TA)n Simple_repeat Simple_repeat 1 162 0 23 0 0 0 chr10 54960227 54960250 -85356515 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 54960290 54960311 -85356454 + AT_rich Low_complexity Low_complexity 1 21 0 536 277 67 67 chr10 54960359 54961074 -85355691 - L1 LINE L1 -3072 3074 2360 207 0 0 0 chr10 54961305 54961328 -85355437 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr10 54961515 54961543 -85355222 + AT_rich Low_complexity Low_complexity 1 28 0 216 67 0 0 chr10 54961595 54961625 -85355140 + (TG)n Simple_repeat Simple_repeat 2 31 0 1786 174 3 0 chr10 54961989 54962294 -85354471 + AluSx SINE Alu 1 306 -6 603 318 56 28 chr10 54963592 54963844 -85352921 + MIR SINE MIR 2 260 -2 729 315 59 11 chr10 54964032 54964318 -85352447 + MER110 LTR ERV1 167 466 -25 332 313 0 0 chr10 54965925 54966021 -85350744 + MER110-int LTR ERV1 1726 1821 -4980 2278 89 0 22 chr10 54966565 54966880 -85349885 + AluSg SINE Alu 1 308 -2 633 357 56 26 chr10 54967114 54967613 -85349152 + MER110-int LTR ERV1 151 664 -3983 335 91 18 0 chr10 54967785 54967840 -85348925 - MER41B LTR ERV1 -89 546 491 386 282 8 35 chr10 54968058 54968230 -85348535 + MER110-int LTR ERV1 969 3268 -3533 264 336 25 34 chr10 54968308 54968427 -85348338 + MER110-int LTR ERV1 3680 3797 -850 199 390 12 0 chr10 54968427 54968509 -85348256 - L3 LINE CR1 -517 1060 978 258 271 127 72 chr10 54969027 54969144 -85347621 + MER110-int LTR ERV1 4443 4575 -72 189 0 0 0 chr10 54969144 54969165 -85347600 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 258 271 127 72 chr10 54969165 54969228 -85347537 + MER110-int LTR ERV1 4575 4633 -14 496 291 53 93 chr10 54969408 54969736 -85347029 + MER110 LTR ERV1 132 435 -33 216 286 29 0 chr10 54970295 54970365 -85346400 + MIR SINE MIR 176 247 -15 264 59 0 0 chr10 54970966 54971000 -85345765 + (A)n Simple_repeat Simple_repeat 1 34 0 336 354 106 16 chr10 54971507 54971761 -85345004 - L1MC/D LINE L1 -2014 5794 5518 192 97 0 0 chr10 54972949 54972980 -85343785 + (TTA)n Simple_repeat Simple_repeat 1 31 0 869 112 0 0 chr10 54972980 54973096 -85343669 - AluY SINE Alu -194 117 2 2135 142 0 0 chr10 54973096 54973406 -85343359 - AluSx SINE Alu -2 310 1 276 176 24 47 chr10 54973716 54973801 -85342964 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 500 275 18 6 chr10 54976697 54976864 -85339901 + L1ME2 LINE L1 5987 6155 -9 2131 120 3 0 chr10 54976918 54977210 -85339555 + AluSp SINE Alu 1 293 -20 5455 191 19 5 chr10 54977307 54978533 -85338232 - L1MC1 LINE L1 -23 6310 5066 528 286 120 53 chr10 54979243 54979544 -85337221 + L2 LINE L2 2852 3172 -141 584 251 84 21 chr10 54979621 54979860 -85336905 - L1ME2 LINE L1 -9 6155 5902 26 0 0 0 chr10 54980132 54980158 -85336607 + AT_rich Low_complexity Low_complexity 1 26 0 285 51 0 0 chr10 54981155 54981194 -85335571 + (TG)n Simple_repeat Simple_repeat 1 39 0 273 143 0 0 chr10 54981285 54981327 -85335438 - MER96B DNA MER1_type? -183 234 193 504 212 26 83 chr10 54981602 54981765 -85335000 + MER96B DNA MER1_type? 236 388 -29 1881 115 6 51 chr10 54981765 54982079 -85334686 - AluSg SINE Alu -10 300 1 504 212 26 83 chr10 54982079 54982108 -85334657 + MER96B DNA MER1_type? 388 417 0 274 361 96 13 chr10 54982108 54982338 -85334427 - L2 LINE L2 -2497 817 569 216 0 0 0 chr10 54982447 54982471 -85334294 + (A)n Simple_repeat Simple_repeat 1 24 0 293 345 90 6 chr10 54983045 54983222 -85333543 + MIR SINE MIR 8 199 -63 23 0 0 0 chr10 54983281 54983304 -85333461 + AT_rich Low_complexity Low_complexity 1 23 0 197 206 0 0 chr10 54983329 54983363 -85333402 - L2 LINE L2 -13 3300 3267 184 330 60 10 chr10 54984026 54984126 -85332639 + MIR SINE MIR 64 168 -94 5004 28 0 0 chr10 54985001 54985604 -85331161 - L1P LINE L1 -856 5290 4688 7081 22 0 0 chr10 54985604 54986424 -85330341 + L1PA2 LINE L1 5330 6153 -2 234 0 0 0 chr10 54987155 54987181 -85329584 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 321 145 0 0 chr10 54987221 54987283 -85329482 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 2149 82 7 36 chr10 54988200 54988504 -85328261 - AluSc SINE Alu -14 295 1 465 19 0 0 chr10 54988955 54989009 -85327756 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 31 26 0 0 chr10 54989483 54989521 -85327244 + AT_rich Low_complexity Low_complexity 1 38 0 11212 258 36 14 chr10 54989882 54993446 -85323319 + L1P LINE L1 1754 5396 -750 1226 186 112 11 chr10 54993743 54994012 -85322753 + AluJo SINE Alu 1 296 -16 1271 190 14 68 chr10 54995231 54995510 -85321255 + AluJo SINE Alu 15 278 -34 21 0 0 0 chr10 54996727 54996748 -85320017 + AT_rich Low_complexity Low_complexity 1 21 0 355 256 157 25 chr10 54997394 54997515 -85319250 - L2 LINE L2 -1 3312 3176 192 390 61 0 chr10 54997644 54997726 -85319039 - MIR SINE MIR -69 139 53 364 182 39 0 chr10 54997759 54997836 -85318929 + Tigger6a DNA MER2_type 1 80 -1003 465 147 0 0 chr10 54997836 54997904 -85318861 - AluJ/FLAM SINE Alu -242 70 3 3056 165 62 158 chr10 54998137 54999232 -85317533 + Tigger6a DNA MER2_type 90 1079 -4 1557 205 14 0 chr10 54999687 54999984 -85316781 - AluJb SINE Alu -9 303 3 803 304 68 86 chr10 55000283 55000770 -85315995 + L2 LINE L2 2810 3287 -26 1528 97 19 0 chr10 55000801 55001008 -85315757 - AluY SINE Alu -100 211 1 248 361 19 9 chr10 55001305 55001413 -85315352 - MIR SINE MIR -88 174 66 210 276 0 17 chr10 55001837 55001895 -85314870 + MIR SINE MIR 156 212 -50 202 150 25 0 chr10 55001941 55001981 -85314784 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 1487 257 34 36 chr10 55002242 55002748 -85314017 + MLT1D LTR MaLR 1 505 0 278 113 0 38 chr10 55003416 55003469 -85313296 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 820 109 29 0 chr10 55003483 55003621 -85313144 - L1MA9 LINE L1 0 6312 6171 1761 196 45 10 chr10 55003677 55004081 -85312684 - L1M2 LINE L1 -525 6373 5956 3497 199 38 13 chr10 55004194 55005029 -85311736 - L1M2 LINE L1 -839 5893 5038 14290 215 28 14 chr10 55005039 55006909 -85309856 + L1PA16 LINE L1 1 1844 -4953 212 0 36 0 chr10 55006909 55006937 -85309828 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 14290 215 28 14 chr10 55006937 55008716 -85308049 + L1PA16 LINE L1 1844 3597 -3200 212 59 29 0 chr10 55008716 55008750 -85308015 + (CAA)n Simple_repeat Simple_repeat 2 36 0 14290 215 28 14 chr10 55008750 55010470 -85306295 + L1PA16 LINE L1 3597 5443 -1354 3408 183 85 35 chr10 55011918 55012885 -85303880 + L1PA16 LINE L1 5798 6817 0 3532 237 121 20 chr10 55012908 55014233 -85302532 - L1M2 LINE L1 -1660 5072 3614 718 172 137 5 chr10 55014242 55014510 -85302255 - LTR47A LTR ERVL -96 356 1 2488 261 75 42 chr10 55014648 55016303 -85300462 - L1M2 LINE L1 -3133 3599 1811 1062 335 80 60 chr10 55016286 55016915 -85299850 - L1M2 LINE L1 -5221 1432 792 * 33 43 0 0 chr10 55018421 55018468 -85298297 + AT_rich Low_complexity Low_complexity 1 47 0 417 175 0 0 chr10 55018609 55018689 -85298076 - MADE1 DNA Mariner 0 80 1 741 178 0 15 chr10 55018918 55019053 -85297712 + FLAM_C SINE Alu 1 133 0 1349 227 13 13 chr10 55019060 55019368 -85297397 + AluJo SINE Alu 4 311 -1 585 276 45 20 chr10 55021066 55021265 -85295500 - MIR SINE MIR -33 229 26 25 0 0 0 chr10 55021433 55021458 -85295307 + AT_rich Low_complexity Low_complexity 1 25 0 207 180 0 40 chr10 55021646 55021696 -85295069 + T-rich Low_complexity Low_complexity 3 50 0 21 0 0 0 chr10 55022008 55022029 -85294736 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 55023025 55023046 -85293719 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr10 55023600 55023640 -85293125 + AT_rich Low_complexity Low_complexity 1 40 0 348 111 0 0 chr10 55024226 55024280 -85292485 + (CA)n Simple_repeat Simple_repeat 1 54 0 207 280 27 107 chr10 55026259 55026409 -85290356 - L2 LINE L2 -10 3303 3166 21 36 0 0 chr10 55026857 55026885 -85289880 + AT_rich Low_complexity Low_complexity 1 28 0 264 255 242 19 chr10 55027020 55027177 -85289588 + L3b LINE CR1 1307 1498 -85 378 262 64 86 chr10 55027203 55027390 -85289375 + MER5A DNA MER1_type 7 189 0 200 302 16 32 chr10 55027451 55027514 -85289251 - MER5A DNA MER1_type -92 97 36 188 0 0 69 chr10 55027767 55027796 -85288969 + (TTTTTA)n Simple_repeat Simple_repeat 4 30 0 867 98 16 0 chr10 55027804 55027927 -85288838 - AluSq/x SINE Alu -187 125 1 1621 122 75 54 chr10 55028382 55028676 -85288089 + AluSg1 SINE Alu 1 300 -9 997 227 123 23 chr10 55030613 55030921 -85285844 + MER58B DNA MER1_type 1 339 -2 21 36 0 0 chr10 55031795 55031823 -85284942 + AT_rich Low_complexity Low_complexity 1 28 0 623 11 81 46 chr10 55033302 55033476 -85283289 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 0 0 0 chr10 55033476 55033507 -85283258 + AT_rich Low_complexity Low_complexity 1 31 0 22 88 0 0 chr10 55034087 55034144 -85282621 + AT_rich Low_complexity Low_complexity 1 57 0 211 300 57 0 chr10 55034159 55034229 -85282536 + MIR SINE MIR 149 222 -40 22 0 0 0 chr10 55034925 55034947 -85281818 + AT_rich Low_complexity Low_complexity 1 22 0 1451 248 79 22 chr10 55035154 55035304 -85281461 - MER67D LTR ERV1 -3 495 355 3239 146 23 11 chr10 55035304 55035824 -85280941 + MER1A DNA MER1_type 2 527 0 1451 248 79 22 chr10 55035824 55036107 -85280658 - MER67D LTR ERV1 -143 355 60 2198 120 22 33 chr10 55036108 55036476 -85280289 + THE1B LTR MaLR 1 364 0 11001 107 18 1 chr10 55036476 55038015 -85278750 + THE1B-int LTR MaLR 1 1566 -14 2261 125 19 27 chr10 55038020 55038387 -85278378 + THE1B LTR MaLR 1 364 0 704 236 37 21 chr10 55038389 55038580 -85278185 - MER67B LTR ERV1 -467 194 1 469 173 25 0 chr10 55038580 55038660 -85278105 - MER31B LTR ERV1 -384 82 1 190 300 67 25 chr10 55038670 55038790 -85277975 - MIR SINE MIR 0 262 138 3185 240 17 0 chr10 55040077 55040859 -85275906 + L1 LINE L1 3739 4533 -1613 5034 175 32 20 chr10 55040860 55041747 -85275018 + L1PA16 LINE L1 4603 5478 -688 1834 171 103 25 chr10 55041747 55042144 -85274621 + MSTA LTR MaLR 1 428 0 5034 175 32 20 chr10 55042144 55042372 -85274393 + L1PA16 LINE L1 5478 5702 -464 2022 133 29 35 chr10 55042372 55042749 -85274016 - THE1C LTR MaLR 0 375 1 5034 175 32 20 chr10 55042749 55043174 -85273591 + L1PA16 LINE L1 5702 6165 -1 461 216 9 9 chr10 55043208 55043327 -85273438 + L1MD3 LINE L1 7665 7994 -1 22 56 0 0 chr10 55043337 55043373 -85273392 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr10 55045895 55045927 -85270838 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 250 291 39 19 chr10 55046344 55046447 -85270318 - MLT1I LTR MaLR 0 409 305 396 288 110 47 chr10 55046512 55046703 -85270062 - MLT1I LTR MaLR -201 208 6 396 179 154 0 chr10 55047103 55047181 -85269584 - MER68 LTR ERV1 -472 90 1 21 82 0 0 chr10 55047497 55047546 -85269219 + AT_rich Low_complexity Low_complexity 1 49 0 1266 264 54 46 chr10 55048010 55048510 -85268255 - MLT1D LTR MaLR -1 504 1 229 347 0 0 chr10 55048725 55048800 -85267965 - MIR3 SINE MIR -46 162 88 22 0 0 0 chr10 55049339 55049361 -85267404 + AT_rich Low_complexity Low_complexity 1 22 0 2540 134 2 10 chr10 55049361 55049757 -85267008 + L1PB3 LINE L1 5586 5978 -176 951 174 17 0 chr10 55050672 55050844 -85265921 + FAM SINE Alu 1 175 0 2033 128 3 0 chr10 55051554 55051842 -85264923 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr10 55051844 55051874 -85264891 + AT_rich Low_complexity Low_complexity 1 30 0 236 154 19 0 chr10 55052288 55052340 -85264425 + (CA)n Simple_repeat Simple_repeat 1 53 0 198 296 106 85 chr10 55052387 55052586 -85264179 + L2 LINE L2 2543 2745 -569 1625 191 32 26 chr10 55052738 55053084 -85263681 + MLT1A1 LTR MaLR 1 348 -17 229 250 0 0 chr10 55053093 55053137 -85263628 + MLT1A1 LTR MaLR 322 365 0 186 303 30 15 chr10 55053215 55053281 -85263484 + L2 LINE L2 3247 3313 0 21 0 0 0 chr10 55053536 55053557 -85263208 + AT_rich Low_complexity Low_complexity 1 21 0 2126 103 7 10 chr10 55053657 55053957 -85262808 - AluSq SINE Alu -14 299 1 23 0 0 0 chr10 55054532 55054555 -85262210 + AT_rich Low_complexity Low_complexity 1 23 0 1171 196 56 95 chr10 55055078 55055436 -85261329 + MLT1A1 LTR MaLR 4 347 -18 183 42 0 0 chr10 55055668 55055692 -85261073 + (GA)n Simple_repeat Simple_repeat 1 24 0 416 335 94 9 chr10 55056163 55056396 -85260369 - MIR SINE MIR -1 261 9 467 242 11 11 chr10 55056670 55056765 -85260000 - MER8 DNA MER2_type -144 95 1 189 318 48 0 chr10 55056771 55056834 -85259931 + L2 LINE L2 3244 3309 -4 470 209 172 0 chr10 55056975 55057109 -85259656 - L1M4 LINE L1 -1546 4600 4444 * 3204 196 10 55 chr10 55057101 55057904 -85258861 + L1MB1 LINE L1 5402 6168 0 347 331 31 25 chr10 55057920 55058080 -85258685 + MIR SINE MIR 36 196 -66 473 284 83 18 chr10 55058114 55058283 -85258482 + L2 LINE L2 342 521 -2793 341 314 16 16 chr10 55058758 55058882 -85257883 + L2 LINE L2 3172 3295 -18 23 54 0 0 chr10 55059143 55059180 -85257585 + AT_rich Low_complexity Low_complexity 1 37 0 297 304 0 29 chr10 55060638 55060740 -85256025 + MIR SINE MIR 59 157 -105 185 264 184 11 chr10 55060772 55060859 -85255906 + MIR SINE MIR 161 262 0 2012 125 47 39 chr10 55060930 55061291 -85255474 - THE1B LTR MaLR 0 364 1 247 387 25 0 chr10 55062064 55062183 -85254582 - MLT1I LTR MaLR -197 212 91 1457 217 60 22 chr10 55062851 55063219 -85253546 + MLT1B LTR MaLR 1 382 -8 27 29 0 0 chr10 55063340 55063374 -85253391 + AT_rich Low_complexity Low_complexity 1 34 0 383 309 56 19 chr10 55063379 55063541 -85253224 - MIR SINE MIR -31 231 64 638 354 24 0 chr10 55063619 55063828 -85252937 - MIR SINE MIR -47 215 2 1409 146 47 65 chr10 55064215 55064537 -85252228 - L1MA7 LINE L1 -6 6285 5970 2265 52 11 0 chr10 55065289 55065575 -85251190 + AluY SINE Alu 1 289 -22 674 154 8 0 chr10 55065578 55065708 -85251057 + GA-rich Low_complexity Low_complexity 2 132 0 427 17 33 0 chr10 55065771 55065831 -85250934 + (TG)n Simple_repeat Simple_repeat 2 63 0 10366 242 46 28 chr10 55067823 55069829 -85246936 + L1P4 LINE L1 689 2658 -3565 2027 148 0 3 chr10 55069829 55070127 -85246638 + AluSx SINE Alu 1 297 -15 10366 242 46 28 chr10 55070127 55072727 -85244038 + L1P4 LINE L1 2658 5517 -706 217 51 51 0 chr10 55073782 55073821 -85242944 + (TA)n Simple_repeat Simple_repeat 2 42 0 183 80 0 0 chr10 55075268 55075293 -85241472 + (A)n Simple_repeat Simple_repeat 1 25 0 819 241 15 69 chr10 55075461 55075723 -85241042 - MER102b DNA MER1_type 0 341 94 512 323 26 20 chr10 55076650 55076845 -85239920 + MIR SINE MIR 53 248 -14 356 272 64 8 chr10 55076920 55077045 -85239720 - MIR SINE MIR -65 197 66 24 0 0 0 chr10 55077313 55077337 -85239428 + AT_rich Low_complexity Low_complexity 1 24 0 642 253 15 40 chr10 55078811 55079009 -85237756 - L2 LINE L2 0 3313 3121 327 265 18 12 chr10 55080025 55080191 -85236574 + (TA)n Simple_repeat Simple_repeat 2 168 0 1895 156 0 17 chr10 55080461 55080762 -85236003 + AluSx SINE Alu 1 296 -16 25 75 0 0 chr10 55080824 55080877 -85235888 + AT_rich Low_complexity Low_complexity 1 53 0 185 333 0 51 chr10 55082326 55082404 -85234361 - L2 LINE L2 0 3313 3240 3336 133 6 20 chr10 55082544 55083055 -85233710 + MER1A DNA MER1_type 26 529 0 763 271 99 53 chr10 55083064 55083348 -85233417 + MLT1E LTR MaLR 87 383 -210 29 101 0 0 chr10 55083373 55083472 -85233293 + AT_rich Low_complexity Low_complexity 1 99 0 22 0 0 0 chr10 55083761 55083783 -85232982 + AT_rich Low_complexity Low_complexity 1 22 0 2150 59 3 11 chr10 55083783 55084069 -85232696 - L1PA7 LINE L1 -23 6131 5848 2265 98 3 0 chr10 55084119 55084425 -85232340 - AluSp SINE Alu -6 307 1 349 261 0 0 chr10 55085455 55085524 -85231241 - Tigger2 DNA MER2_type -2649 69 1 25 31 0 0 chr10 55085814 55085846 -85230919 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr10 55086816 55086852 -85229913 + AT_rich Low_complexity Low_complexity 1 36 0 1154 201 58 31 chr10 55087787 55088080 -85228685 + AluJo SINE Alu 11 311 -1 204 182 0 0 chr10 55088831 55088875 -85227890 + (TA)n Simple_repeat Simple_repeat 2 45 0 2630 33 0 0 chr10 55089596 55089899 -85226866 + AluY SINE Alu 1 303 -8 536 266 188 27 chr10 55091126 55091225 -85225540 - L2 LINE L2 -88 3225 3143 2339 108 37 0 chr10 55091225 55091576 -85225189 + THE1B LTR MaLR 1 364 0 536 266 188 27 chr10 55091576 55091811 -85224954 - L2 LINE L2 -170 3143 2837 * 1073 277 188 24 chr10 55091781 55092441 -85224324 - L2 LINE L2 -830 2484 1717 233 312 19 64 chr10 55092647 55092804 -85223961 - L2 LINE L2 -1935 1379 1230 242 351 61 9 chr10 55093463 55093577 -85223188 - MIR3 SINE MIR 0 208 89 327 191 0 36 chr10 55093656 55093740 -85223025 + L1PA16 LINE L1 6079 6159 -7 33 25 0 0 chr10 55093816 55093856 -85222909 + AT_rich Low_complexity Low_complexity 1 40 0 1373 181 14 0 chr10 55093863 55094139 -85222626 - L1MB3 LINE L1 -9 6174 5895 250 288 86 61 chr10 55094201 55094399 -85222366 - MIR SINE MIR -11 251 49 370 317 21 7 chr10 55094443 55094585 -85222180 + MIR SINE MIR 13 156 -106 275 354 22 11 chr10 55094773 55094954 -85221811 + L1MC/D LINE L1 5578 5760 -2048 3627 155 75 18 chr10 55095525 55096286 -85220479 - Tigger3b DNA MER2_type -425 806 3 1515 178 126 3 chr10 55096298 55096624 -85220141 - MER47A DNA MER2_type 0 366 1 882 83 83 0 chr10 55096741 55096862 -85219903 - AluSg SINE Alu -179 131 1 1075 244 51 3 chr10 55097120 55097452 -85219313 - L1MB1 LINE L1 -1013 5133 4786 2184 189 20 69 chr10 55097454 55098146 -85218619 + L1MB1 LINE L1 5135 5791 -377 1053 237 122 56 chr10 55098154 55098564 -85218201 + MER31B LTR ERV1 1 437 -29 662 188 51 0 chr10 55098597 55098735 -85218030 + L1MB1 LINE L1 6023 6167 -1 23 0 0 0 chr10 55098735 55098758 -85218007 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr10 55098770 55098799 -85217966 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 55098812 55098834 -85217931 + AT_rich Low_complexity Low_complexity 1 22 0 216 368 58 11 chr10 55098910 55098997 -85217768 + MIR SINE MIR 36 126 -82 24 53 0 0 chr10 55099834 55099872 -85216893 + AT_rich Low_complexity Low_complexity 1 38 0 1810 158 21 36 chr10 55100715 55100997 -85215768 + Tigger3(Golem) DNA MER2_type 2 280 -2749 2177 106 0 17 chr10 55100997 55101299 -85215466 - AluSc SINE Alu -12 297 1 1810 158 21 36 chr10 55101299 55101352 -85215413 + Tigger3(Golem) DNA MER2_type 280 332 -2697 21 0 0 0 chr10 55102824 55102845 -85213920 + AT_rich Low_complexity Low_complexity 1 21 0 1582 115 8 12 chr10 55103560 55103583 -85213182 - L1PA8A LINE L1 0 6131 6109 261 57 0 0 chr10 55103583 55103618 -85213147 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1582 115 8 12 chr10 55103618 55103846 -85212919 - L1PA8A LINE L1 -22 6109 5881 238 240 190 33 chr10 55104633 55104754 -85212011 + MIR SINE MIR 18 157 -105 10663 158 56 16 chr10 55105110 55105692 -85211073 + Tigger1 DNA MER2_type 1 558 -1860 1367 77 10 43 chr10 55105692 55105920 -85210845 + L1PA4 LINE L1 5939 6159 0 10663 158 56 16 chr10 55105920 55107298 -85209467 + Tigger1 DNA MER2_type 558 2041 -377 516 237 59 8 chr10 55107643 55107761 -85209004 - FLAM_A SINE Alu -9 124 1 180 0 0 0 chr10 55108203 55108223 -85208542 + (TA)n Simple_repeat Simple_repeat 1 20 0 787 118 35 6 chr10 55108313 55108483 -85208282 + GA-rich Low_complexity Low_complexity 3 177 0 320 254 98 107 chr10 55109226 55109450 -85207315 + MIR SINE MIR 14 235 -27 7064 221 50 38 chr10 55110679 55116007 -85200758 + L1PA15 LINE L1 1398 6811 -5 420 316 45 0 chr10 55116092 55116225 -85200540 + MIR SINE MIR 37 175 -87 1926 127 7 0 chr10 55117313 55117604 -85199161 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 55118216 55118249 -85198516 + AT_rich Low_complexity Low_complexity 1 33 0 180 324 28 0 chr10 55118651 55118722 -85198043 - L2 LINE L2 -1342 1972 1900 246 128 0 0 chr10 55119462 55119501 -85197264 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 188 83 160 chr10 55120095 55120239 -85196526 + MIR SINE MIR 106 238 -24 294 29 0 0 chr10 55120276 55120311 -85196454 + (TA)n Simple_repeat Simple_repeat 2 36 0 227 263 20 20 chr10 55120362 55120461 -85196304 + (TA)n Simple_repeat Simple_repeat 2 100 0 195 153 59 12 chr10 55120620 55120705 -85196060 + (TA)n Simple_repeat Simple_repeat 1 89 0 446 228 63 39 chr10 55121549 55121676 -85195089 + MER94 DNA DNA 2 131 -3 223 275 44 33 chr10 55122228 55122319 -85194446 - L3 LINE CR1 -4 1573 1482 22 35 0 0 chr10 55123513 55123542 -85193223 + AT_rich Low_complexity Low_complexity 1 29 0 309 51 0 0 chr10 55123891 55123930 -85192835 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 200 0 0 chr10 55124706 55124741 -85192024 + MIR SINE MIR 100 134 -74 22 70 0 0 chr10 55125221 55125264 -85191501 + AT_rich Low_complexity Low_complexity 1 43 0 643 229 0 0 chr10 55125415 55125533 -85191232 + FLAM_C SINE Alu 4 121 -22 195 125 0 0 chr10 55125544 55125584 -85191181 + (TA)n Simple_repeat Simple_repeat 1 40 0 396 0 0 0 chr10 55126437 55126481 -85190284 + (TG)n Simple_repeat Simple_repeat 2 45 0 9962 222 23 10 chr10 55126578 55130581 -85186184 + L1PA15 LINE L1 1780 6815 -1 4763 171 36 33 chr10 55130602 55131581 -85185184 + L1MA4 LINE L1 4817 5806 -494 279 0 0 0 chr10 55131581 55131612 -85185153 + (CA)n Simple_repeat Simple_repeat 2 32 0 4763 171 36 33 chr10 55131612 55132105 -85184660 + L1MA4 LINE L1 5806 6296 -4 30 0 0 0 chr10 55132109 55132139 -85184626 + AT_rich Low_complexity Low_complexity 1 30 0 3325 259 83 55 chr10 55132314 55135158 -85181607 + L1ME1 LINE L1 3240 5953 -213 843 44 0 7 chr10 55135409 55135534 -85181231 - L1M1 LINE L1 -680 5475 5376 5543 11 0 0 chr10 55135534 55136157 -85180608 + L1PA2 LINE L1 5528 6154 -1 265 317 0 24 chr10 55137744 55137826 -85178939 + MIR3 SINE MIR 108 187 -21 347 350 37 6 chr10 55137874 55138037 -85178728 - L2 LINE L2 -4 3309 3142 776 266 66 35 chr10 55138160 55138446 -85178319 - L2 LINE L2 -382 2932 2638 7284 185 44 22 chr10 55138601 55141295 -85175470 + L1MA4 LINE L1 3553 6300 0 25 51 0 0 chr10 55141381 55141420 -85175345 + AT_rich Low_complexity Low_complexity 1 39 0 1761 230 35 51 chr10 55141626 55142134 -85174631 - MLT1D LTR MaLR -5 500 1 879 266 94 75 chr10 55144024 55144548 -85172217 + MLT1F1 LTR MaLR 5 567 0 960 224 29 0 chr10 55146224 55146429 -85170336 - MER20 DNA MER1_type -1 218 8 1826 134 10 10 chr10 55146435 55146749 -85170016 + L1MA3 LINE L1 5992 6305 0 829 211 10 1 chr10 55146832 55147009 -85169756 - MER68 LTR ERV1 0 562 355 454 198 12 0 chr10 55147068 55147154 -85169611 + Tigger5 DNA MER2_type 2237 2323 0 1160 201 14 8 chr10 55147162 55147453 -85169312 - MER68 LTR ERV1 -226 336 9 23 0 0 0 chr10 55147895 55147918 -85168847 + AT_rich Low_complexity Low_complexity 1 23 0 2429 50 0 3 chr10 55147933 55148232 -85168533 - AluY SINE Alu -13 298 1 208 345 61 40 chr10 55148450 55148598 -85168167 + L2 LINE L2 3154 3304 -9 339 279 41 25 chr10 55149986 55150108 -85166657 + MIR SINE MIR 17 140 -122 197 108 27 0 chr10 55150216 55150253 -85166512 + CT-rich Low_complexity Low_complexity 2 39 0 192 354 87 31 chr10 55151318 55151479 -85165286 - MIR SINE MIR -68 194 25 22 0 0 0 chr10 55152101 55152123 -85164642 + AT_rich Low_complexity Low_complexity 1 22 0 2591 45 0 3 chr10 55152321 55152632 -85164133 + AluY SINE Alu 1 310 -1 214 50 50 0 chr10 55152636 55152676 -85164089 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1837 133 20 3 chr10 55153315 55153608 -85163157 - AluSx SINE Alu -13 299 2 186 71 0 0 chr10 55153623 55153651 -85163114 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 424 53 0 0 chr10 55153975 55154078 -85162687 - AluY SINE Alu 0 345 243 1115 45 6 114 chr10 55154078 55154254 -85162511 - AluY SINE Alu -154 157 1 25 31 0 0 chr10 55154541 55154573 -85162192 + AT_rich Low_complexity Low_complexity 1 32 0 22 70 0 0 chr10 55154743 55154786 -85161979 + AT_rich Low_complexity Low_complexity 1 43 0 1798 126 65 10 chr10 55155065 55155358 -85161407 - AluSx SINE Alu -3 309 1 203 304 17 70 chr10 55155921 55156036 -85160729 + MIR SINE MIR 148 256 -6 1991 109 41 3 chr10 55156070 55156183 -85160582 + AluSx SINE Alu 6 113 -199 369 0 0 0 chr10 55156183 55156224 -85160541 + (CA)n Simple_repeat Simple_repeat 2 42 0 1991 109 41 3 chr10 55156224 55156404 -85160361 + AluSx SINE Alu 113 310 -2 180 97 0 0 chr10 55156813 55156844 -85159921 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 213 39 0 0 chr10 55156844 55156870 -85159895 + (GA)n Simple_repeat Simple_repeat 1 26 0 2643 23 3 0 chr10 55157403 55157707 -85159058 - AluY SINE Alu -6 305 1 183 42 0 0 chr10 55157856 55157880 -85158885 + (GA)n Simple_repeat Simple_repeat 1 24 0 273 286 8 34 chr10 55157950 55158069 -85158696 + MLT1K LTR MaLR 360 475 -113 1226 233 80 0 chr10 55158312 55158587 -85158178 + Tigger5 DNA MER2_type 1 297 -2026 373 232 0 12 chr10 55158582 55158664 -85158101 + Tigger5 DNA MER2_type 2242 2322 -1 * 212 162 0 0 chr10 55161066 55161103 -85155662 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 304 341 91 53 chr10 55161166 55161486 -85155279 - MLT1K LTR MaLR -124 464 133 1964 134 0 3 chr10 55161526 55161861 -85154904 + AluSx SINE Alu 1 334 0 1187 159 21 17 chr10 55163615 55163873 -85152892 + L1MA4 LINE L1 6022 6273 -27 232 80 0 40 chr10 55163873 55163923 -85152842 + (TA)n Simple_repeat Simple_repeat 1 48 0 1187 159 21 17 chr10 55163923 55163951 -85152814 + L1MA4 LINE L1 6273 6299 -1 22 0 0 0 chr10 55164223 55164245 -85152520 + AT_rich Low_complexity Low_complexity 1 22 0 273 293 0 49 chr10 55166016 55166098 -85150667 + L2 LINE L2 3137 3214 -58 1156 162 5 0 chr10 55166331 55166522 -85150243 + L1PA15-16 LINE L1 11 202 -6647 2851 316 18 0 chr10 55166529 55167313 -85149452 + L1PA15-16 LINE L1 741 1538 -5311 2446 33 0 0 chr10 55167312 55167611 -85149154 - L1PA3 LINE L1 -1599 4547 4249 * 7548 31 0 0 chr10 55167611 55169216 -85147549 + L1PA3 LINE L1 4546 6150 -5 1654 254 41 26 chr10 55169253 55169628 -85147137 + L1PB4 LINE L1 690 1058 -5145 2287 106 0 16 chr10 55169628 55169939 -85146826 - AluSg SINE Alu -2 308 3 1654 254 41 26 chr10 55169939 55170411 -85146354 + L1PB4 LINE L1 1058 1644 -4559 3097 102 4 4 chr10 55170458 55170920 -85145845 - L1PA8 LINE L1 -3 6169 5708 2222 76 0 0 chr10 55170921 55171210 -85145555 + L1PA8 LINE L1 5423 5711 -420 1305 260 41 0 chr10 55171217 55171586 -85145179 + L1PB4 LINE L1 1649 2032 -4171 9184 226 21 50 chr10 55171617 55175481 -85141284 + L1PB4 LINE L1 2473 6210 -3 683 281 142 32 chr10 55175789 55176220 -85140545 - L2 LINE L2 -1 3312 2835 938 279 21 11 chr10 55176893 55177173 -85139592 + AluJb SINE Alu 1 283 -19 1162 93 23 0 chr10 55177263 55177435 -85139330 + L1MA5A LINE L1 6046 6221 -76 27 29 0 0 chr10 55177477 55177511 -85139254 + AT_rich Low_complexity Low_complexity 1 34 0 1027 143 0 0 chr10 55177795 55177942 -85138823 + AluSq/x SINE Alu 1 147 -166 323 130 0 0 chr10 55178123 55178177 -85138588 + Alu SINE Alu 249 302 0 345 47 0 0 chr10 55178372 55178415 -85138350 + (CA)n Simple_repeat Simple_repeat 2 44 0 217 331 174 0 chr10 55178513 55178634 -85138131 - L3 LINE CR1 -12 1565 1424 32 0 0 0 chr10 55179531 55179563 -85137202 + AT_rich Low_complexity Low_complexity 1 32 0 348 24 0 0 chr10 55180237 55180278 -85136487 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr10 55180330 55180359 -85136406 + AT_rich Low_complexity Low_complexity 1 29 0 391 307 88 0 chr10 55180586 55180723 -85136042 - Charlie8 DNA MER1_type -2268 149 1 1583 188 0 41 chr10 55180724 55181043 -85135722 - AluJb SINE Alu -6 306 1 1089 39 0 0 chr10 55181771 55181899 -85134866 - L1PA7 LINE L1 -18 6136 6009 203 0 37 0 chr10 55183629 55183656 -85133109 + (CA)n Simple_repeat Simple_repeat 2 29 0 309 175 0 16 chr10 55183657 55183720 -85133045 - L1MC4 LINE L1 -1340 6702 6641 463 195 18 0 chr10 55183828 55183941 -85132824 + (TA)n Simple_repeat Simple_repeat 1 115 0 24 32 0 0 chr10 55185227 55185258 -85131507 + AT_rich Low_complexity Low_complexity 1 31 0 28 71 0 0 chr10 55185739 55185795 -85130970 + AT_rich Low_complexity Low_complexity 1 56 0 285 135 0 0 chr10 55185796 55185848 -85130917 + (T)n Simple_repeat Simple_repeat 1 52 0 225 265 0 0 chr10 55185920 55185988 -85130777 + T-rich Low_complexity Low_complexity 1 68 0 21 67 0 0 chr10 55185996 55186026 -85130739 + AT_rich Low_complexity Low_complexity 1 30 0 4216 4 2 0 chr10 55186143 55186623 -85130142 - L1P1 LINE L1 -375 5780 5300 246 174 0 0 chr10 55187417 55187463 -85129302 + (TATG)n Simple_repeat Simple_repeat 3 48 0 362 332 58 26 chr10 55187702 55187892 -85128873 - MER117 DNA MER1_type 0 197 2 213 175 0 0 chr10 55189372 55189412 -85127353 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 780 304 126 34 chr10 55189541 55190182 -85126583 - L2 LINE L2 -1 3312 2607 458 319 18 4 chr10 55190312 55190496 -85126269 - MIR SINE MIR -34 228 47 293 265 0 0 chr10 55190636 55190704 -85126061 - MER94 DNA DNA -29 105 38 5206 32 0 0 chr10 55191020 55191642 -85125123 + L1PA4 LINE L1 5533 6154 -1 26 0 0 0 chr10 55192220 55192246 -85124519 + AT_rich Low_complexity Low_complexity 1 26 0 337 316 148 25 chr10 55192868 55193064 -85123701 + MIR SINE MIR 2 221 -41 297 128 0 0 chr10 55193262 55193309 -85123456 + (TG)n Simple_repeat Simple_repeat 2 48 0 2005 132 0 0 chr10 55193347 55193634 -85123131 + AluSx SINE Alu 14 300 -12 3975 176 47 2 chr10 55193669 55194483 -85122282 + L1MA4 LINE L1 5437 6286 -14 1114 266 87 43 chr10 55194591 55195143 -85121622 + MER69 DNA AcHobo 1933 2508 -18 22 35 0 0 chr10 55195404 55195433 -85121332 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 55195973 55195994 -85120771 + AT_rich Low_complexity Low_complexity 1 21 0 732 276 0 0 chr10 55197427 55197597 -85119168 + FRAM SINE Alu 1 170 -6 345 213 46 52 chr10 55197641 55197779 -85118986 - MLT1G LTR MaLR -8 547 413 712 244 75 119 chr10 55197902 55198197 -85118568 - MLT1G LTR MaLR -313 282 1 316 353 41 0 chr10 55199067 55199189 -85117576 + MIR SINE MIR 15 141 -121 2455 220 31 11 chr10 55200039 55200647 -85116118 + L1MC3 LINE L1 7166 7785 0 246 378 46 36 chr10 55200702 55200898 -85115867 + MIR3 SINE MIR 2 199 -9 192 368 26 0 chr10 55201229 55201346 -85115419 + L2 LINE L2 2734 2853 -461 351 327 93 37 chr10 55202060 55202274 -85114491 + LTR67 LTR ERVL 127 352 -205 698 250 20 15 chr10 55202460 55202664 -85114101 - MER3 DNA MER1_type -4 205 1 5461 78 33 4 chr10 55204992 55205774 -85110991 + L1PA11 LINE L1 5349 6153 -21 2566 58 0 0 chr10 55206538 55206849 -85109916 - AluY SINE Alu 0 311 1 244 204 0 0 chr10 55207030 55207079 -85109686 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 55207098 55207121 -85109644 + AT_rich Low_complexity Low_complexity 1 23 0 3669 148 30 11 chr10 55207866 55208137 -85108628 - L1MA5A LINE L1 0 6297 6033 2270 50 40 3 chr10 55208137 55208437 -85108328 + AluY SINE Alu 1 311 0 3669 148 30 11 chr10 55208437 55208827 -85107938 - L1MA5A LINE L1 -264 6033 5623 23 0 0 0 chr10 55211878 55211901 -85104864 + AT_rich Low_complexity Low_complexity 1 23 0 276 289 0 0 chr10 55211917 55212007 -85104758 - L1MC4 LINE L1 -1339 6703 6614 259 276 23 0 chr10 55211977 55212064 -85104701 + L1MC4 LINE L1 6614 6702 -1340 * 308 281 41 16 chr10 55212366 55212487 -85104278 + LTR67 LTR ERVL 432 555 -2 186 43 0 0 chr10 55213255 55213278 -85103487 + (A)n Simple_repeat Simple_repeat 1 23 0 1327 65 0 0 chr10 55213690 55213860 -85102905 - L1PA7 LINE L1 -3 6151 5982 388 264 145 25 chr10 55214748 55214907 -85101858 + MIR SINE MIR 3 180 -82 4449 214 45 60 chr10 55215156 55216246 -85100519 + L1M2b LINE L1 1552 2650 -4559 1004 144 0 62 chr10 55216246 55216370 -85100395 + L1PB3 LINE L1 5972 6081 -73 1768 181 18 39 chr10 55216370 55216752 -85100013 - THE1C LTR MaLR 0 375 2 1004 144 0 62 chr10 55216752 55216821 -85099944 + L1PB3 LINE L1 6081 6153 -1 4449 214 45 60 chr10 55216821 55217209 -85099556 + L1M2b LINE L1 2650 3042 -4167 27 0 0 0 chr10 55217392 55217419 -85099346 + AT_rich Low_complexity Low_complexity 1 27 0 231 243 176 0 chr10 55219080 55219154 -85097611 - L2 LINE L2 0 3272 3186 234 226 87 70 chr10 55220279 55220394 -85096371 + MLT1K LTR MaLR 402 518 -70 21 57 0 0 chr10 55221148 55221183 -85095582 + AT_rich Low_complexity Low_complexity 1 35 0 213 39 0 0 chr10 55221942 55221968 -85094797 + (TG)n Simple_repeat Simple_repeat 1 26 0 227 161 18 0 chr10 55222842 55222898 -85093867 + (TA)n Simple_repeat Simple_repeat 1 57 0 359 315 60 38 chr10 55222898 55223133 -85093632 + MLT1J1 LTR MaLR 31 270 -176 350 309 54 47 chr10 55223262 55223540 -85093225 + HAL1 LINE L1 824 1103 -1404 388 319 37 0 chr10 55223552 55223687 -85093078 + L2 LINE L2 1844 1983 -1331 185 245 191 53 chr10 55223777 55223871 -85092894 - L2 LINE L2 -1387 1927 1821 1057 299 145 5 chr10 55224018 55224439 -85092326 + L2 LINE L2 2236 2715 -599 806 284 66 35 chr10 55224474 55224840 -85091925 + L1MDa LINE L1 75 451 -6089 991 225 50 100 chr10 55224907 55225362 -85091403 + MLT2B1 LTR ERVL 1 414 0 313 270 40 40 chr10 55226168 55226268 -85090497 - L1MC4 LINE L1 -1340 6702 6603 291 269 86 51 chr10 55226330 55226564 -85090201 + HAL1 LINE L1 2264 2505 -2 200 231 26 0 chr10 55226591 55226669 -85090096 + (TA)n Simple_repeat Simple_repeat 2 81 0 241 338 0 0 chr10 55228074 55228145 -85088620 - L2 LINE L2 0 3313 3243 251 295 129 22 chr10 55228480 55228619 -85088146 - MIR SINE MIR -94 168 15 834 20 0 0 chr10 55228744 55228844 -85087921 + (TCTA)n Simple_repeat Simple_repeat 3 102 0 245 284 0 0 chr10 55228886 55228969 -85087796 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 223 361 0 11 chr10 55229078 55229258 -85087507 + CT-rich Low_complexity Low_complexity 2 179 0 * 275 264 11 50 chr10 55229133 55229315 -85087450 + (TCTCTG)n Simple_repeat Simple_repeat 2 176 0 396 0 0 0 chr10 55230029 55230073 -85086692 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 77 0 0 chr10 55234143 55234169 -85082596 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr10 55234216 55234240 -85082525 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 55236375 55236398 -85080367 + AT_rich Low_complexity Low_complexity 1 23 0 2394 58 0 0 chr10 55236562 55236857 -85079908 - AluY SINE Alu -13 298 4 198 0 0 0 chr10 55237449 55237471 -85079294 + (TA)n Simple_repeat Simple_repeat 1 22 0 23 54 0 0 chr10 55237557 55237594 -85079171 + AT_rich Low_complexity Low_complexity 1 37 0 1371 249 109 74 chr10 55238775 55239007 -85077758 - MLT1E LTR MaLR 0 593 371 2063 121 0 7 chr10 55239007 55239305 -85077460 - AluSg SINE Alu -14 296 1 1371 249 109 74 chr10 55239305 55239643 -85077122 - MLT1E LTR MaLR -222 371 3 181 140 35 0 chr10 55240194 55240251 -85076514 + (TA)n Simple_repeat Simple_repeat 1 59 0 32 0 0 0 chr10 55240490 55240522 -85076243 + AT_rich Low_complexity Low_complexity 1 32 0 196 308 19 0 chr10 55240541 55240593 -85076172 - L2 LINE L2 -9 3263 3211 21 0 0 0 chr10 55240746 55240767 -85075998 + AT_rich Low_complexity Low_complexity 1 21 0 255 269 154 0 chr10 55242158 55242236 -85074529 - L2 LINE L2 -1 3312 3223 201 121 0 0 chr10 55243651 55243684 -85073081 + (TA)n Simple_repeat Simple_repeat 2 34 0 1991 125 3 3 chr10 55243985 55244290 -85072475 - AluSc SINE Alu -4 305 1 1865 101 7 47 chr10 55244795 55244961 -85071804 - AluSx SINE Alu -13 299 128 197 56 0 56 chr10 55244961 55244997 -85071768 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2182 92 0 0 chr10 55244997 55245278 -85071487 - AluSc SINE Alu -28 281 1 1865 101 7 47 chr10 55245278 55245388 -85071377 - AluSx SINE Alu -182 130 33 568 358 73 56 chr10 55245595 55246540 -85070225 + L2 LINE L2 2005 2965 -349 256 380 60 0 chr10 55246718 55246818 -85069947 + L2 LINE L2 3134 3239 -33 337 279 74 16 chr10 55246960 55247082 -85069683 - MIR SINE MIR -62 200 72 187 399 32 16 chr10 55247079 55247221 -85069544 + L2 LINE L2 2768 2915 -399 * 954 47 79 0 chr10 55247221 55247348 -85069417 + MER85 DNA T2_type 3 139 0 187 399 32 16 chr10 55247348 55247393 -85069372 + L2 LINE L2 2915 2958 -356 4304 142 37 4 chr10 55247589 55248321 -85068444 + Tigger2 DNA MER2_type 2 757 -1961 1454 153 12 8 chr10 55248357 55248611 -85068154 + Tigger2 DNA MER2_type 2462 2716 -2 361 309 37 52 chr10 55248632 55248768 -85067997 + L2 LINE L2 3139 3272 0 316 353 41 0 chr10 55249848 55249970 -85066795 - MIR SINE MIR -121 141 15 712 244 75 119 chr10 55250840 55251135 -85065630 + MLT1G LTR MaLR 1 282 -313 345 213 46 52 chr10 55251258 55251396 -85065369 + MLT1H1 LTR MaLR 413 547 -8 732 276 0 0 chr10 55251440 55251610 -85065155 - FRAM SINE Alu -6 170 1 21 0 0 0 chr10 55253043 55253064 -85063701 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 55253604 55253633 -85063132 + AT_rich Low_complexity Low_complexity 1 29 0 1114 266 87 43 chr10 55253894 55254446 -85062319 - MER69 DNA AcHobo -18 2508 1933 3975 176 47 2 chr10 55254554 55255368 -85061397 - L1MA4 LINE L1 -14 6286 5437 2005 132 0 0 chr10 55255403 55255690 -85061075 - AluSx SINE Alu -12 300 14 297 128 0 0 chr10 55255728 55255775 -85060990 + (CA)n Simple_repeat Simple_repeat 2 48 0 337 316 148 25 chr10 55255973 55256169 -85060596 - MIR SINE MIR -41 221 2 26 0 0 0 chr10 55256791 55256817 -85059948 + AT_rich Low_complexity Low_complexity 1 26 0 7303 21 1 0 chr10 55257395 55258249 -85058516 - L1PA3 LINE L1 -1 6154 5300 246 174 0 0 chr10 55259043 55259089 -85057676 + (TATG)n Simple_repeat Simple_repeat 3 48 0 362 332 58 26 chr10 55259328 55259518 -85057247 - MER117 DNA MER1_type 0 197 2 213 175 0 0 chr10 55260998 55261038 -85055727 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 780 304 126 34 chr10 55261167 55261808 -85054957 - L2 LINE L2 -1 3312 2607 458 319 18 4 chr10 55261938 55262122 -85054643 - MIR SINE MIR -34 228 47 293 265 0 0 chr10 55262262 55262330 -85054435 - MER94 DNA DNA -29 105 38 5246 27 0 5 chr10 55262647 55263272 -85053493 + L1PA4 LINE L1 5534 6155 0 22 35 0 0 chr10 55263614 55263643 -85053122 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr10 55264232 55264273 -85052492 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr10 55264437 55264462 -85052303 + AT_rich Low_complexity Low_complexity 1 25 0 231 296 83 53 chr10 55265379 55265511 -85051254 - MIR3 SINE MIR -5 203 68 1919 195 51 33 chr10 55265777 55266271 -85050494 + MLT2C2 LTR ERVL 1 554 0 24 32 0 0 chr10 55266459 55266490 -85050275 + AT_rich Low_complexity Low_complexity 1 31 0 298 243 29 14 chr10 55266558 55266628 -85050137 + MIR SINE MIR 91 161 -101 2072 106 42 0 chr10 55266717 55267000 -85049765 - AluSx SINE Alu -17 295 1 259 206 0 41 chr10 55267073 55267146 -85049619 + A-rich Low_complexity Low_complexity 1 70 0 22 0 0 0 chr10 55267777 55267799 -85048966 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 55268266 55268296 -85048469 + AT_rich Low_complexity Low_complexity 1 30 0 211 195 0 0 chr10 55268887 55268928 -85047837 + (CA)n Simple_repeat Simple_repeat 2 42 0 275 299 105 45 chr10 55269541 55270179 -85046586 + HAL1b LINE L1 260 935 -413 927 266 49 16 chr10 55270179 55270423 -85046342 + L1M3a LINE L1 2 253 -5702 3055 284 50 41 chr10 55270627 55270713 -85046052 + L1M3a LINE L1 477 561 -5473 2040 146 13 56 chr10 55270713 55271091 -85045674 + THE1B LTR MaLR 1 362 -2 3055 284 50 41 chr10 55271091 55274120 -85042645 + L1M3a LINE L1 561 3073 -2961 272 253 86 69 chr10 55274222 55274467 -85042298 + HAL1b LINE L1 1013 1261 -87 291 54 0 0 chr10 55274690 55274727 -85042038 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 31 0 0 chr10 55277546 55277578 -85039187 + AT_rich Low_complexity Low_complexity 1 32 0 207 100 0 0 chr10 55277638 55277668 -85039097 + (T)n Simple_repeat Simple_repeat 1 30 0 266 423 8 0 chr10 55277842 55277965 -85038800 + MER91A DNA MER1_type 30 153 -43 230 206 0 27 chr10 55279887 55279960 -85036805 + T-rich Low_complexity Low_complexity 2 72 0 182 265 61 20 chr10 55280258 55280307 -85036458 - L2 LINE L2 -9 3304 3254 253 333 22 29 chr10 55280319 55280457 -85036308 - MIR SINE MIR -106 156 20 1831 187 27 73 chr10 55280472 55280625 -85036140 + MSTC LTR MaLR 11 169 -259 2275 90 3 13 chr10 55280625 55280926 -85035839 + AluSq SINE Alu 7 304 -9 1831 187 27 73 chr10 55280926 55281210 -85035555 + MSTC LTR MaLR 169 428 0 202 367 29 50 chr10 55281340 55281479 -85035286 - L2 LINE L2 -201 3071 2936 21 0 0 0 chr10 55281552 55281573 -85035192 + AT_rich Low_complexity Low_complexity 1 21 0 480 103 26 0 chr10 55282199 55282277 -85034488 + MADE1 DNA Mariner 1 80 0 1639 129 0 8 chr10 55282815 55283078 -85033687 - L1PB1 LINE L1 -1 6150 5890 765 88 0 9 chr10 55283678 55283791 -85032974 + L1MA2 LINE L1 6193 6304 0 22 88 0 0 chr10 55283869 55283926 -85032839 + AT_rich Low_complexity Low_complexity 1 57 0 1639 146 96 0 chr10 55284129 55284390 -85032375 - AluSx SINE Alu -26 286 1 26 74 0 0 chr10 55284392 55284446 -85032319 + AT_rich Low_complexity Low_complexity 1 54 0 2093 112 0 7 chr10 55285091 55285420 -85031345 + AluSg SINE Alu 1 327 0 2082 108 3 3 chr10 55285499 55285785 -85030980 + AluSp SINE Alu 1 286 -27 225 133 0 0 chr10 55285807 55285852 -85030913 - LTR66 LTR ERVL -172 438 394 310 315 16 0 chr10 55285862 55285988 -85030777 + L1MC4 LINE L1 6614 6703 -1339 270 281 16 49 chr10 55286115 55286380 -85030385 + MER46C DNA MER2_type 10 316 -22 7042 215 62 15 chr10 55286381 55287955 -85028810 - MER52A LTR ERV1 0 1755 108 1415 195 7 34 chr10 55289975 55290273 -85026492 - AluJo SINE Alu -22 290 1 2375 199 94 4 chr10 55290351 55290922 -85025843 - L1MA7 LINE L1 -4 6287 5661 27 29 0 0 chr10 55291247 55291281 -85025484 + AT_rich Low_complexity Low_complexity 1 34 0 183 284 0 111 chr10 55292198 55292279 -85024486 - MIR SINE MIR -119 143 72 211 404 36 22 chr10 55292372 55292595 -85024170 - L3 LINE CR1 -354 1223 998 3741 136 10 7 chr10 55292674 55293290 -85023475 - L1PA16 LINE L1 -12 6154 5537 1224 229 26 3 chr10 55293732 55294042 -85022723 + L1 LINE L1 3226 3542 -2604 1489 198 7 0 chr10 55294042 55294340 -85022425 + L1 LINE L1 3963 4262 -1884 1402 204 40 80 chr10 55295008 55295458 -85021307 + MSTB1 LTR MaLR 1 432 0 2325 60 0 0 chr10 55295782 55296067 -85020698 + AluY SINE Alu 1 285 -26 1224 239 127 61 chr10 55297029 55297519 -85019246 - MLT1F LTR MaLR -11 531 10 1778 253 35 41 chr10 55297555 55298065 -85018700 + MLT2B3 LTR ERVL 1 507 -47 687 166 65 7 chr10 55298056 55298195 -85018570 - THE1C LTR MaLR -228 147 1 * 230 361 42 0 chr10 55298792 55298911 -85017854 + MLT1L LTR MaLR 145 268 -347 26 64 0 0 chr10 55299136 55299183 -85017582 + AT_rich Low_complexity Low_complexity 1 47 0 1219 146 65 25 chr10 55300367 55300642 -85016123 + L1MA9 LINE L1 6021 6306 -6 1018 232 71 20 chr10 55301663 55301960 -85014805 + MLT1C LTR MaLR 154 465 -2 526 288 90 26 chr10 55302017 55302250 -85014515 + MIR SINE MIR 4 251 -11 405 293 85 30 chr10 55302731 55302895 -85013870 - MER5A DNA MER1_type -16 173 1 2521 48 0 3 chr10 55303027 55303337 -85013428 + AluY SINE Alu 3 311 0 331 250 182 7 chr10 55303559 55303707 -85013058 - MER5B DNA MER1_type -3 175 2 24 32 0 0 chr10 55304679 55304710 -85012055 + AT_rich Low_complexity Low_complexity 1 31 0 463 195 18 0 chr10 55305996 55306109 -85010656 + (TA)n Simple_repeat Simple_repeat 1 115 0 418 194 10 10 chr10 55306217 55306320 -85010445 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 4338 12 0 6 chr10 55306469 55306990 -85009775 - L1PA3 LINE L1 0 6155 5659 1240 39 0 0 chr10 55306990 55307143 -85009622 + L1P LINE L1 5049 5201 -945 13158 165 36 3 chr10 55307533 55309853 -85006912 + Tigger1 DNA MER2_type 22 2417 -1 24 0 0 0 chr10 55310170 55310194 -85006571 + AT_rich Low_complexity Low_complexity 1 24 0 214 231 0 0 chr10 55310432 55310471 -85006294 + polypyrimidine Low_complexity Low_complexity 2 40 0 2203 119 0 0 chr10 55310472 55310784 -85005981 - AluSx SINE Alu 0 312 1 240 340 10 0 chr10 55311078 55311181 -85005584 + MIR SINE MIR 101 204 -58 1669 122 42 0 chr10 55311187 55311450 -85005315 - L1PA11 LINE L1 -3 6171 5898 366 115 0 0 chr10 55311700 55311761 -85005004 + (TG)n Simple_repeat Simple_repeat 2 62 0 272 343 80 14 chr10 55311805 55312018 -85004747 - MIR SINE MIR 0 262 36 31 26 0 0 chr10 55312184 55312222 -85004543 + AT_rich Low_complexity Low_complexity 1 38 0 220 310 58 11 chr10 55312821 55312908 -85003857 + MER5B DNA MER1_type 4 94 -84 328 318 119 1 chr10 55312927 55313105 -85003660 + L1 LINE L1 3995 4191 -1955 331 269 87 10 chr10 55314485 55314589 -85002176 + L2 LINE L2 3195 3306 -7 23 0 0 0 chr10 55316403 55316426 -85000339 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr10 55317002 55317033 -84999732 + (TG)n Simple_repeat Simple_repeat 1 31 0 246 314 10 39 chr10 55317531 55317633 -84999132 + L2 LINE L2 3167 3265 -48 209 189 0 0 chr10 55318524 55318561 -84998204 + CT-rich Low_complexity Low_complexity 2 38 0 1807 134 35 0 chr10 55319004 55319287 -84997478 + AluSx SINE Alu 4 296 -16 1553 269 67 44 chr10 55320548 55321437 -84995328 - L1ME1 LINE L1 -5 6161 5199 188 33 0 33 chr10 55322023 55322053 -84994712 + (TA)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr10 55322269 55322299 -84994466 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 55322934 55322967 -84993798 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 55324906 55324927 -84991838 + AT_rich Low_complexity Low_complexity 1 21 0 1038 155 25 0 chr10 55325248 55325409 -84991356 - AluSq SINE Alu -8 305 141 182 233 0 23 chr10 55325866 55325909 -84990856 - L2 LINE L2 -3 3269 3228 * 214 299 31 79 chr10 55325883 55326010 -84990755 - MIR SINE MIR -13 249 129 27 49 0 0 chr10 55326109 55326150 -84990615 + AT_rich Low_complexity Low_complexity 1 41 0 21 71 0 0 chr10 55326524 55326566 -84990199 + AT_rich Low_complexity Low_complexity 1 42 0 2083 122 0 0 chr10 55328417 55328705 -84988060 - AluSg SINE Alu -20 290 3 945 133 104 3 chr10 55330480 55330784 -84985981 + MSTA LTR MaLR 1 428 0 186 322 273 0 chr10 55331461 55331582 -84985183 - MIR3 SINE MIR -5 203 50 25 51 0 0 chr10 55331798 55331837 -84984928 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr10 55331908 55331937 -84984828 + AT_rich Low_complexity Low_complexity 1 29 0 264 59 0 0 chr10 55331984 55332018 -84984747 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2096 121 3 0 chr10 55332022 55332320 -84984445 - AluY SINE Alu -12 299 1 200 311 71 91 chr10 55332646 55332942 -84983823 - L2 LINE L2 -19 3294 3005 1160 165 161 31 chr10 55333558 55333818 -84982947 + AluJb SINE Alu 2 295 -7 1844 161 137 11 chr10 55334804 55335184 -84981581 + MSTA LTR MaLR 1 428 0 27 0 0 0 chr10 55337443 55337470 -84979295 + AT_rich Low_complexity Low_complexity 1 27 0 390 290 129 42 chr10 55337481 55337674 -84979091 - MIR SINE MIR -18 244 35 226 308 0 0 chr10 55339448 55339513 -84977252 + L2 LINE L2 3200 3264 -8 5767 181 51 119 chr10 55340559 55342286 -84974479 - MER52A LTR ERV1 0 1755 146 1666 161 52 30 chr10 55344119 55344486 -84972279 + THE1C LTR MaLR 1 375 0 25 51 0 0 chr10 55344678 55344717 -84972048 + AT_rich Low_complexity Low_complexity 1 39 0 1511 173 163 24 chr10 55344794 55345169 -84971596 + MSTA LTR MaLR 2 428 0 7043 186 71 11 chr10 55345170 55346656 -84970109 + MSTA-int LTR MaLR 3 1578 -2 1259 189 97 8 chr10 55346658 55346917 -84969848 + MSTA LTR MaLR 1 282 -146 239 331 160 6 chr10 55347292 55347461 -84969304 - MLT1I LTR MaLR -18 391 197 1828 117 38 0 chr10 55348356 55348622 -84968143 - AluSg SINE Alu -14 296 21 1030 136 74 0 chr10 55348623 55348785 -84967980 - AluSq SINE Alu -139 174 1 430 323 50 12 chr10 55350950 55351111 -84965654 - MIR3 SINE MIR -4 204 38 875 270 123 0 chr10 55351315 55351641 -84965124 - MER47A DNA MER2_type 0 366 1 2497 49 3 0 chr10 55352714 55353019 -84963746 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 55353823 55353847 -84962918 + AT_rich Low_complexity Low_complexity 1 24 0 2372 149 2 7 chr10 55353847 55354255 -84962510 - L1PA13 LINE L1 -2 6812 6407 1666 184 112 20 chr10 55354256 55354648 -84962117 - MSTA LTR MaLR 0 428 1 1774 147 25 10 chr10 55354648 55354962 -84961803 - MSTA-int LTR MaLR 0 1580 1262 1076 128 6 6 chr10 55354973 55355145 -84961620 + MSTA-int LTR MaLR 1480 1651 0 359 115 18 4 chr10 55355145 55355208 -84961557 + MSTA LTR MaLR 1 62 -313 6094 179 25 42 chr10 55355228 55356482 -84960283 - MSTA-int LTR MaLR -344 1236 3 1470 165 162 24 chr10 55356484 55356860 -84959905 - MSTA LTR MaLR 0 428 1 17385 209 29 10 chr10 55356863 55361936 -84954829 - L1PA13 LINE L1 -407 6407 1239 506 280 33 37 chr10 55362102 55362316 -84954449 + Charlie8 DNA MER1_type 8 220 -2197 2658 191 25 66 chr10 55362405 55363043 -84953722 + LTR9 LTR ERV1 1 612 0 588 206 0 0 chr10 55364502 55364604 -84952161 + Tigger3(Golem) DNA MER2_type 1 102 -2927 * 3892 128 100 18 chr10 55364602 55365089 -84951676 + Tigger3(Golem) DNA MER2_type 274 720 -2309 1778 127 67 0 chr10 55365089 55365356 -84951409 - AluSx SINE Alu -27 285 1 3892 128 100 18 chr10 55365356 55365404 -84951361 + Tigger3(Golem) DNA MER2_type 720 763 -2266 230 81 27 0 chr10 55365404 55365441 -84951324 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 3892 128 100 18 chr10 55365441 55365769 -84950996 + Tigger3(Golem) DNA MER2_type 763 3029 0 6391 29 0 1 chr10 55366997 55367753 -84949012 + L1PA3 LINE L1 5396 6150 -5 4761 244 63 28 chr10 55368397 55371005 -84945760 - L1MB8 LINE L1 -12 6977 4274 1375 275 24 26 chr10 55371005 55371511 -84945254 + MLT1D LTR MaLR 1 505 0 4761 244 63 28 chr10 55371511 55371590 -84945175 - L1MB8 LINE L1 -2715 4274 4199 2520 64 0 3 chr10 55371602 55371914 -84944851 + AluY SINE Alu 1 311 0 377 242 16 40 chr10 55371926 55372050 -84944715 - L1MB8 LINE L1 -2769 4188 4068 1369 238 16 16 chr10 55372075 55372382 -84944383 - MLT1A1 LTR MaLR -58 307 1 2627 255 75 36 chr10 55372382 55373723 -84943042 - L1MB8 LINE L1 -2943 4014 2663 2290 263 31 26 chr10 55373756 55374635 -84942130 - L1MB8 LINE L1 -4200 1757 677 636 246 116 5 chr10 55374674 55374873 -84941892 - L1MB8 LINE L1 -6628 231 11 952 241 84 34 chr10 55375431 55375788 -84940977 - MLT1D LTR MaLR 0 505 131 293 253 13 0 chr10 55375808 55375883 -84940882 - MIR SINE MIR -94 168 93 623 57 11 0 chr10 55377696 55377784 -84938981 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 233 298 12 36 chr10 55379557 55379641 -84937124 - MIR SINE MIR 0 262 181 320 277 32 0 chr10 55379761 55379855 -84936910 - MER94 DNA DNA -37 97 1 383 218 0 0 chr10 55379856 55379935 -84936830 - MIR SINE MIR -102 106 29 228 219 0 0 chr10 55379980 55380021 -84936744 + (TG)n Simple_repeat Simple_repeat 2 42 0 258 268 128 61 chr10 55380021 55380185 -84936580 + L2 LINE L2 2312 2486 -828 630 231 59 82 chr10 55380554 55380799 -84935966 - MLT2B1 LTR ERVL -156 364 126 1086 234 50 46 chr10 55380799 55381187 -84935578 + MLT2B2 LTR ERVL 1 414 0 506 259 9 0 chr10 55381187 55381302 -84935463 - MLT2B2 LTR ERVL -385 130 15 1384 181 37 30 chr10 55381533 55381832 -84934933 - THE1C LTR MaLR 0 375 75 3892 121 28 53 chr10 55381832 55382486 -84934279 - THE1C-int LTR MaLR -943 637 1 1917 178 19 26 chr10 55382486 55382667 -84934098 - THE1C LTR MaLR 0 375 194 2325 115 19 25 chr10 55382667 55383033 -84933732 + THE1B LTR MaLR 1 364 0 1917 178 19 26 chr10 55383033 55383228 -84933537 - THE1C LTR MaLR -181 194 2 4627 238 44 20 chr10 55383272 55385822 -84930943 - L1MC2 LINE L1 0 6344 3736 26 30 0 0 chr10 55386234 55386267 -84930498 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 55386284 55386313 -84930452 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 55388603 55388626 -84928139 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 55389052 55389074 -84927691 + AT_rich Low_complexity Low_complexity 1 22 0 263 303 141 7 chr10 55389229 55389371 -84927394 - MIR SINE MIR -101 161 1 217 338 58 43 chr10 55389386 55389557 -84927208 + MIR SINE MIR 4 169 -40 2464 168 64 35 chr10 55390173 55390721 -84926044 + MER34B LTR ERV1 1 564 -1 281 233 27 14 chr10 55391508 55391581 -84925184 + GA-rich Low_complexity Low_complexity 2 75 0 481 259 77 12 chr10 55391699 55392001 -84924764 + L1MC4 LINE L1 7005 7330 -478 261 347 46 40 chr10 55392572 55392745 -84924020 + MIR SINE MIR 48 221 -41 326 260 0 0 chr10 55393465 55393542 -84923223 + MER52A LTR ERV1 1 77 -1678 2670 175 55 185 chr10 55393543 55394726 -84922039 + MER52A LTR ERV1 424 1452 -303 2582 216 3 49 chr10 55394715 55395326 -84921439 + MER52A LTR ERV1 1173 1755 0 * 2536 172 40 15 chr10 55396202 55396674 -84920091 - LOR1a LTR ERV1 -13 484 1 242 281 81 54 chr10 55397487 55397609 -84919156 - MER112 DNA MER1_type -19 241 124 2180 163 17 0 chr10 55397609 55397965 -84918800 + THE1B LTR MaLR 1 362 -2 242 281 81 54 chr10 55397965 55397996 -84918769 - MER112 DNA MER1_type -136 124 95 270 0 0 0 chr10 55397996 55398026 -84918739 + (TA)n Simple_repeat Simple_repeat 2 31 0 242 281 81 54 chr10 55398026 55398056 -84918709 - MER112 DNA MER1_type -165 95 52 324 203 68 14 chr10 55398271 55398419 -84918346 + (TA)n Simple_repeat Simple_repeat 2 157 0 21 0 0 0 chr10 55398573 55398594 -84918171 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 55398670 55398696 -84918069 + AT_rich Low_complexity Low_complexity 1 26 0 3201 150 46 24 chr10 55398722 55398941 -84917824 - MER7C DNA MER2_type -2427 601 388 2006 148 34 25 chr10 55398941 55399298 -84917467 + THE1B LTR MaLR 5 364 0 3201 150 46 24 chr10 55399298 55399666 -84917099 - MER7C DNA MER2_type -2640 388 1 971 262 132 47 chr10 55399672 55400074 -84916691 - L1ME1 LINE L1 -33 6133 5670 1385 230 60 42 chr10 55400074 55400457 -84916308 - MLT1B LTR MaLR 0 390 1 971 262 132 47 chr10 55400457 55400608 -84916157 - L1ME1 LINE L1 -496 5670 5533 311 229 28 18 chr10 55400613 55400722 -84916043 - L1MEc LINE L1 -3560 2655 2546 3004 277 90 34 chr10 55400766 55402282 -84914483 - L1MEc LINE L1 -4746 1650 50 1182 202 136 42 chr10 55402352 55402684 -84914081 + MLT1A1 LTR MaLR 3 365 0 584 219 135 23 chr10 55402685 55402912 -84913853 + MLT1A1-int LTR MaLR 3 298 -1414 964 239 33 29 chr10 55402917 55403160 -84913605 + Tigger7 DNA MER2_type 1 244 -489 1920 206 35 0 chr10 55403177 55403546 -84913219 + MLT1A1-int LTR MaLR 1354 1735 0 910 229 54 111 chr10 55403546 55403934 -84912831 + MLT1A2 LTR MaLR 1 366 -8 261 271 29 0 chr10 55404089 55404159 -84912606 + L2 LINE L2 3239 3310 -3 2169 118 0 7 chr10 55404645 55404950 -84911815 + AluSq SINE Alu 1 303 -10 2281 88 0 10 chr10 55404954 55405261 -84911504 + AluSc SINE Alu 1 304 -5 32 0 0 0 chr10 55405379 55405411 -84911354 + AT_rich Low_complexity Low_complexity 1 32 0 240 111 0 0 chr10 55406409 55406445 -84910320 + (TC)n Simple_repeat Simple_repeat 2 37 0 468 62 0 0 chr10 55406445 55406509 -84910256 + (CA)n Simple_repeat Simple_repeat 1 64 0 24 0 0 0 chr10 55406694 55406718 -84910047 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 55406813 55406836 -84909929 + AT_rich Low_complexity Low_complexity 1 23 0 190 125 42 0 chr10 55406872 55406920 -84909845 + (TA)n Simple_repeat Simple_repeat 1 50 0 327 294 192 0 chr10 55407654 55407800 -84908965 + MIR SINE MIR 73 246 -16 180 320 167 6 chr10 55407898 55408054 -84908711 - L2 LINE L2 -126 3146 2966 1911 212 74 93 chr10 55408662 55409401 -84907364 - LTR8A LTR ERV1 -2 725 1 3163 179 15 35 chr10 55409535 55410183 -84906582 + MER41B LTR ERV1 1 635 0 202 390 88 51 chr10 55410221 55410746 -84906019 + L3 LINE CR1 427 970 -607 2427 191 45 17 chr10 55410835 55411369 -84905396 + MER34C LTR ERV1 37 585 0 531 253 158 0 chr10 55411383 55411541 -84905224 - MIR SINE MIR -65 197 15 380 304 50 12 chr10 55411594 55411755 -84905010 + L3 LINE CR1 1162 1328 -249 2080 144 0 0 chr10 55411775 55412074 -84904691 + AluSx SINE Alu 2 300 -12 474 136 0 0 chr10 55412090 55412171 -84904594 + L1MA5 LINE L1 5751 5831 -469 903 72 80 0 chr10 55412472 55412597 -84904168 + MER85 DNA T2_type 1 135 -4 1284 243 21 0 chr10 55414177 55414457 -84902308 - AluJo SINE Alu -26 286 1 291 333 142 23 chr10 55415212 55415431 -84901334 - MIR SINE MIR -1 261 17 26 0 0 0 chr10 55415532 55415558 -84901207 + AT_rich Low_complexity Low_complexity 1 26 0 1813 172 105 98 chr10 55416483 55416944 -84899821 + MER39 LTR ERV1 1 511 -196 1604 184 14 7 chr10 55416944 55417232 -84899533 + AluJo SINE Alu 1 290 -22 1813 172 105 98 chr10 55417232 55417426 -84899339 + MER39 LTR ERV1 511 702 -5 282 217 0 36 chr10 55417462 55417545 -84899220 + MER116 DNA Mariner 1 80 0 249 298 12 0 chr10 55417691 55417775 -84898990 + (TA)n Simple_repeat Simple_repeat 1 85 0 2108 211 7 5 chr10 55417779 55418192 -84898573 - MER47B DNA MER2_type -1 417 4 382 338 69 7 chr10 55418967 55419112 -84897653 - MIR SINE MIR -104 158 5 5956 91 7 17 chr10 55419275 55420705 -84896060 - L1PA8 LINE L1 -1 6171 4709 10117 107 53 3 chr10 55420705 55422195 -84894570 + THE1B-int LTR MaLR 16 1580 0 2127 112 48 31 chr10 55422195 55422553 -84894212 + THE1B LTR MaLR 1 364 0 360 281 0 0 chr10 55422567 55422663 -84894102 - MER103 DNA DNA -49 117 22 25 0 0 0 chr10 55424273 55424298 -84892467 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr10 55424452 55424501 -84892264 + AT_rich Low_complexity Low_complexity 1 49 0 2282 80 0 10 chr10 55424861 55425160 -84891605 + AluY SINE Alu 4 299 -12 22 0 0 0 chr10 55425240 55425262 -84891503 + AT_rich Low_complexity Low_complexity 1 22 0 216 381 61 22 chr10 55425430 55425611 -84891154 - L2 LINE L2 -693 2621 2434 24 0 0 0 chr10 55426958 55426982 -84889783 + AT_rich Low_complexity Low_complexity 1 24 0 2324 74 0 49 chr10 55427482 55427806 -84888959 + AluY SINE Alu 1 308 -3 2723 157 4 62 chr10 55427946 55428474 -84888291 + LOR1a LTR ERV1 1 497 0 9588 134 45 41 chr10 55428474 55429216 -84887549 + LOR1a-int LTR ERV1 1 738 -7382 2211 91 7 7 chr10 55429216 55429513 -84887252 + AluSq SINE Alu 1 297 -16 9588 134 45 41 chr10 55429513 55430569 -84886196 + LOR1a-int LTR ERV1 738 1807 -6313 697 144 36 14 chr10 55430557 55430696 -84886069 + LOR1a-int LTR ERV1 1940 2081 -6039 * 697 23 0 11 chr10 55430702 55430790 -84885975 + L1PA3 LINE L1 6069 6155 0 5879 136 14 15 chr10 55430889 55431918 -84884847 + LOR1a-int LTR ERV1 2098 3125 -4995 569 233 14 20 chr10 55431918 55432064 -84884701 + MER52A LTR ERV1 1 145 -1610 468 322 99 15 chr10 55432422 55432624 -84884141 - MIR SINE MIR -1 261 43 22 0 0 0 chr10 55433497 55433519 -84883246 + AT_rich Low_complexity Low_complexity 1 22 0 916 122 12 41 chr10 55433519 55433691 -84883074 - AluJb SINE Alu -26 286 120 264 297 95 9 chr10 55434748 55434864 -84881901 - MIR SINE MIR -101 161 37 24 0 0 0 chr10 55437111 55437135 -84879630 + AT_rich Low_complexity Low_complexity 1 24 0 1594 188 13 17 chr10 55437887 55438236 -84878529 + AluJb SINE Alu 1 312 0 347 336 35 9 chr10 55439225 55439341 -84877424 - L2 LINE L2 -6 3266 3148 23 0 0 0 chr10 55443206 55443229 -84873536 + AT_rich Low_complexity Low_complexity 1 23 0 188 299 72 52 chr10 55443447 55443544 -84873221 - L2 LINE L2 -6 3266 3168 259 280 114 23 chr10 55444810 55444942 -84871823 - MIR3 SINE MIR -5 203 60 2077 103 0 13 chr10 55445267 55445567 -84871198 - AluY SINE Alu -15 296 1 6819 62 10 3 chr10 55446231 55447105 -84869660 - MER11B LTR ERVK -356 880 1 225 316 13 13 chr10 55447105 55447162 -84869603 + MER52A LTR ERV1 243 299 -1456 4955 189 34 23 chr10 55447184 55448146 -84868619 + MER52A LTR ERV1 225 1755 0 3947 181 47 55 chr10 55448146 55449260 -84867505 + LOR1a-int LTR ERV1 3122 4226 -3894 7710 128 51 6 chr10 55449260 55450540 -84866225 + LOR1a-int LTR ERV1 4727 6064 -2056 421 202 22 0 chr10 55450539 55450628 -84866137 + LOR1a-int LTR ERV1 8030 8120 0 * 2741 146 44 10 chr10 55450629 55451110 -84865655 + LOR1a LTR ERV1 1 497 0 585 256 0 0 chr10 55451382 55451499 -84865266 + FLAM_A SINE Alu 1 138 0 190 0 0 0 chr10 55451499 55451520 -84865245 + (TAA)n Simple_repeat Simple_repeat 2 180 0 198 0 0 0 chr10 55452136 55452158 -84864607 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1281 182 11 83 chr10 55452244 55452617 -84864148 - L1MA7 LINE L1 0 6291 5946 328 204 247 0 chr10 55452829 55452922 -84863843 + MSTA LTR MaLR 87 202 -226 1385 198 4 12 chr10 55452924 55453176 -84863589 + MSTA-int LTR MaLR 1194 1443 -208 1440 176 114 73 chr10 55453185 55453543 -84863222 + MSTA LTR MaLR 55 427 -1 460 308 76 0 chr10 55453809 55454007 -84862758 - MER58C DNA MER1_type -2 213 1 239 270 42 74 chr10 55454044 55454259 -84862506 + L1MC4 LINE L1 7505 7712 -330 261 0 0 0 chr10 55455177 55455206 -84861559 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 240 100 0 0 chr10 55455542 55455582 -84861183 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr10 55456504 55456524 -84860241 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 437 265 191 45 chr10 55456568 55456945 -84859820 - L2 LINE L2 0 3313 2882 737 372 121 24 chr10 55458827 55459793 -84856972 + L2 LINE L2 1870 2929 -385 196 343 87 25 chr10 55459881 55460123 -84856642 + L2 LINE L2 3057 3313 0 1558 151 0 32 chr10 55461230 55461482 -84855283 + AluSx SINE Alu 1 244 -68 47 19 0 0 chr10 55461491 55461545 -84855220 + AT_rich Low_complexity Low_complexity 1 54 0 397 270 40 20 chr10 55461882 55462030 -84854735 - LTR33 LTR ERVL -1 520 370 189 0 0 0 chr10 55462390 55462411 -84854354 + (A)n Simple_repeat Simple_repeat 1 21 0 4222 122 23 0 chr10 55462414 55463079 -84853686 - L1MA3 LINE L1 -11 6294 5615 273 360 48 16 chr10 55463366 55463491 -84853274 - LTR33 LTR ERVL -319 202 74 1063 240 67 21 chr10 55464544 55464873 -84851892 + MER2 DNA MER2_type 1 344 0 207 0 0 0 chr10 55465635 55465658 -84851107 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 863 227 71 38 chr10 55465679 55466051 -84850714 + LTR40b LTR ERVL 3 462 0 224 77 26 0 chr10 55466395 55466434 -84850331 + (TA)n Simple_repeat Simple_repeat 1 40 0 1658 189 91 43 chr10 55466883 55467441 -84849324 + MER4A LTR ERV1 1 445 -20 307 254 73 18 chr10 55467956 55468066 -84848699 + L1ME3A LINE L1 6042 6157 -13 1810 173 41 25 chr10 55468179 55468468 -84848297 + L1MA8 LINE L1 5842 6142 -149 2112 128 3 0 chr10 55468468 55468772 -84847993 + AluSx SINE Alu 1 305 -7 1810 173 41 25 chr10 55468772 55468921 -84847844 + L1MA8 LINE L1 6142 6287 -4 1401 68 0 0 chr10 55468998 55469175 -84847590 - AluY SINE Alu -2 309 133 21 57 0 0 chr10 55469211 55469246 -84847519 + AT_rich Low_complexity Low_complexity 1 35 0 2107 87 0 3 chr10 55469250 55469537 -84847228 - AluY SINE Alu -23 288 3 183 42 0 0 chr10 55469858 55469882 -84846883 + (CA)n Simple_repeat Simple_repeat 1 24 0 300 326 0 0 chr10 55470109 55470195 -84846570 - L1MC4 LINE L1 -1343 6699 6614 226 136 17 34 chr10 55470267 55470326 -84846439 + (TA)n Simple_repeat Simple_repeat 1 58 0 216 200 0 0 chr10 55470371 55470436 -84846329 + (TA)n Simple_repeat Simple_repeat 1 65 0 187 181 12 36 chr10 55470580 55470663 -84846102 + (TA)n Simple_repeat Simple_repeat 1 81 0 232 171 0 73 chr10 55470714 55470796 -84845969 - L1MC4 LINE L1 -1323 6719 6644 644 310 69 100 chr10 55470806 55471357 -84845408 + L2 LINE L2 2267 2800 -514 234 191 0 44 chr10 55471491 55471559 -84845206 + GA-rich Low_complexity Low_complexity 4 68 0 21 57 0 0 chr10 55474117 55474152 -84842613 + AT_rich Low_complexity Low_complexity 1 35 0 191 246 62 77 chr10 55474162 55474227 -84842538 - L2 LINE L2 -4 3309 3246 556 319 43 0 chr10 55474366 55474573 -84842192 - MIR SINE MIR -12 250 35 210 281 31 0 chr10 55475315 55475379 -84841386 - MIR SINE MIR -102 160 95 242 180 16 0 chr10 55475589 55475650 -84841115 + (TA)n Simple_repeat Simple_repeat 1 62 0 984 181 119 68 chr10 55477947 55478287 -84838478 + MLT1A1 LTR MaLR 2 396 0 3872 266 46 109 chr10 55478287 55478912 -84837853 + MLT1A1-int LTR MaLR 1 664 -1071 483 102 95 80 chr10 55478912 55479049 -84837716 - MER85 DNA T2_type 0 139 1 3872 266 46 109 chr10 55479049 55480275 -84836490 + MLT1A1-int LTR MaLR 664 1735 0 1007 206 80 82 chr10 55480275 55480639 -84836126 + MLT1A1 LTR MaLR 1 363 -2 201 261 0 0 chr10 55480973 55481019 -84835746 - L2 LINE L2 -3 3310 3265 23 0 0 0 chr10 55481705 55481728 -84835037 + AT_rich Low_complexity Low_complexity 1 23 0 1436 225 88 0 chr10 55482458 55482822 -84833943 + MSTD LTR MaLR 1 396 0 2320 81 0 0 chr10 55483717 55484014 -84832751 - AluSg SINE Alu -13 297 1 35 0 0 0 chr10 55486533 55486568 -84830197 + AT_rich Low_complexity Low_complexity 1 35 0 321 47 0 0 chr10 55486970 55487013 -84829752 + (CAA)n Simple_repeat Simple_repeat 2 44 0 5053 127 16 51 chr10 55488543 55489817 -84826948 - L1PA13 LINE L1 -24 6139 4908 1775 172 0 25 chr10 55490080 55490400 -84826365 + AluJb SINE Alu 1 312 0 295 342 140 10 chr10 55490567 55490760 -84826005 + L2 LINE L2 2551 2768 -546 1860 144 3 7 chr10 55491154 55491493 -84825272 - AluSx SINE Alu 0 338 1 223 171 0 0 chr10 55491868 55491909 -84824856 + A-rich Low_complexity Low_complexity 2 42 0 1604 210 7 0 chr10 55492760 55493070 -84823695 - AluJb SINE Alu 0 312 1 22 0 0 0 chr10 55493847 55493869 -84822896 + AT_rich Low_complexity Low_complexity 1 22 0 188 315 0 19 chr10 55494338 55494392 -84822373 + MIR SINE MIR 205 257 -5 22 0 0 0 chr10 55494541 55494563 -84822202 + AT_rich Low_complexity Low_complexity 1 22 0 204 289 167 26 chr10 55494946 55495060 -84821705 + MIR SINE MIR 68 197 -65 2833 212 47 22 chr10 55495339 55496300 -84820465 + L1MC1 LINE L1 4850 5835 -498 2065 120 0 3 chr10 55496300 55496601 -84820164 + AluSc SINE Alu 1 300 -9 2833 212 47 22 chr10 55496601 55496626 -84820139 + L1MC1 LINE L1 5835 5858 -475 1840 185 21 0 chr10 55496669 55496999 -84819766 + MLT1A1 LTR MaLR 29 365 0 2669 152 39 0 chr10 55497001 55497468 -84819297 + L1MC1 LINE L1 5833 6317 -16 359 281 70 92 chr10 55497497 55497725 -84819040 - MIR SINE MIR -39 223 1 218 200 0 0 chr10 55498792 55498832 -84817933 + (CTA)n Simple_repeat Simple_repeat 2 41 0 483 309 127 43 chr10 55499662 55500245 -84816520 + L2 LINE L2 2677 3312 -1 22 0 0 0 chr10 55500577 55500599 -84816166 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 55500798 55500822 -84815943 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr10 55500851 55500887 -84815878 + AT_rich Low_complexity Low_complexity 1 36 0 33 0 0 0 chr10 55501089 55501122 -84815643 + AT_rich Low_complexity Low_complexity 1 33 0 36 0 0 0 chr10 55501336 55501372 -84815393 + AT_rich Low_complexity Low_complexity 1 36 0 1039 169 52 4 chr10 55501390 55501621 -84815144 + L1MA4A LINE L1 6062 6303 0 238 300 12 12 chr10 55501620 55501700 -84815065 + MLT1A2 LTR MaLR 155 234 -140 4978 177 23 25 chr10 55501704 55503460 -84813305 - L1MA4A LINE L1 -197 7168 5420 1604 163 21 31 chr10 55503472 55503760 -84813005 - AluSx SINE Alu -25 287 3 21 71 0 0 chr10 55503810 55503852 -84812913 + AT_rich Low_complexity Low_complexity 1 42 0 7892 24 2 0 chr10 55503852 55505545 -84811220 - L1PA3 LINE L1 -14 6141 4447 21124 31 1 0 chr10 55505545 55508112 -84808653 + L1PA3 LINE L1 1873 4440 -1706 1484 191 7 0 chr10 55508110 55508388 -84808377 - L1MA4A LINE L1 -2396 4812 4533 * 5605 106 4 6 chr10 55508398 55509677 -84807088 - L1PA10 LINE L1 -136 6032 4753 * 8388 229 84 30 chr10 55509664 55509928 -84806837 - L1MA4A LINE L1 -2647 4561 4313 2106 125 3 0 chr10 55509928 55510224 -84806541 - AluSc SINE Alu -12 297 1 8388 229 84 30 chr10 55510224 55510993 -84805772 - L1MA4A LINE L1 -2895 4313 3587 1382 181 28 71 chr10 55510993 55511319 -84805446 - AluSx SINE Alu 0 312 1 2245 104 3 0 chr10 55511326 55511623 -84805142 - AluSg SINE Alu -7 303 6 8388 229 84 30 chr10 55511623 55511960 -84804805 - L1MA4A LINE L1 -3626 3582 3265 1047 47 0 35 chr10 55511960 55512129 -84804636 + (TTCC)n Simple_repeat Simple_repeat 3 165 0 1975 122 11 0 chr10 55512129 55512408 -84804357 - AluSx SINE Alu -30 282 1 8388 229 84 30 chr10 55512408 55513191 -84803574 - L1MA4A LINE L1 -3943 3265 2526 1918 127 13 7 chr10 55513191 55513490 -84803275 - L1PB2 LINE L1 0 6151 5851 8388 229 84 30 chr10 55513490 55514740 -84802025 - L1MA4A LINE L1 -4682 2526 1345 1613 160 137 13 chr10 55514740 55515040 -84801725 + MER1B DNA MER1_type 1 337 0 8388 229 84 30 chr10 55515040 55515890 -84800875 - L1MA4A LINE L1 -5863 1345 1 664 209 0 16 chr10 55515905 55516034 -84800731 - MLT1A1 LTR MaLR -213 152 26 1586 226 26 6 chr10 55516042 55516392 -84800373 + MLT1A1 LTR MaLR 9 365 0 12328 194 20 17 chr10 55516392 55519778 -84796987 + L1MA3 LINE L1 2387 5783 -522 2595 116 64 0 chr10 55519780 55520204 -84796561 + L1MA3 LINE L1 5853 6303 -2 24 32 0 0 chr10 55520616 55520647 -84796118 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr10 55521327 55521362 -84795403 + AT_rich Low_complexity Low_complexity 1 35 0 552 242 24 30 chr10 55521377 55521542 -84795223 + L1MC4 LINE L1 7742 7905 -137 1933 138 0 17 chr10 55522836 55523133 -84793632 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 55524609 55524631 -84792134 + AT_rich Low_complexity Low_complexity 1 22 0 264 242 116 11 chr10 55525360 55525455 -84791310 - MER103 DNA DNA -18 148 44 23 33 0 0 chr10 55527078 55527108 -84789657 + AT_rich Low_complexity Low_complexity 1 30 0 1079 37 7 0 chr10 55527877 55528013 -84788752 - L1P LINE L1 -1063 5083 4947 6955 47 1 1 chr10 55528013 55528880 -84787885 + L1PA5 LINE L1 5282 6151 -3 271 269 108 8 chr10 55529087 55529217 -84787548 - MIR SINE MIR -36 226 84 1568 162 29 67 chr10 55529255 55529570 -84787195 - AluJb SINE Alu -9 303 1 39 68 0 0 chr10 55529616 55529690 -84787075 + AT_rich Low_complexity Low_complexity 1 74 0 181 390 30 24 chr10 55530240 55530409 -84786356 + MIR3 SINE MIR 38 207 -1 183 42 0 0 chr10 55530411 55530435 -84786330 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 316 338 57 13 chr10 55530505 55530662 -84786103 - L3 LINE CR1 -106 1471 1308 2252 167 13 0 chr10 55530715 55531110 -84785655 - L1MA9 LINE L1 -55 6257 5858 336 311 114 14 chr10 55531554 55531738 -84785027 - MIR SINE MIR -26 236 36 402 57 0 0 chr10 55532009 55532062 -84784703 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 533 244 50 94 chr10 55532470 55532650 -84784115 - MIR SINE MIR -51 211 24 2613 166 10 113 chr10 55532650 55533132 -84783633 + LTR9 LTR ERV1 1 531 -81 204 40 0 0 chr10 55533132 55533157 -84783608 + (TC)n Simple_repeat Simple_repeat 2 26 0 2613 166 10 113 chr10 55533157 55533219 -84783546 + LTR9 LTR ERV1 531 465 -147 351 0 0 0 chr10 55533219 55533258 -84783507 + (GA)n Simple_repeat Simple_repeat 1 39 0 2613 166 10 113 chr10 55533258 55533394 -84783371 + LTR9 LTR ERV1 464 612 0 533 244 50 94 chr10 55533394 55533414 -84783351 - MIR SINE MIR -238 24 20 23 0 0 0 chr10 55534587 55534610 -84782155 + AT_rich Low_complexity Low_complexity 1 23 0 2383 170 23 16 chr10 55534737 55535166 -84781599 - MSTB1 LTR MaLR 0 432 1 1902 142 0 32 chr10 55535420 55535729 -84781036 + AluSx SINE Alu 1 299 -13 22 56 0 0 chr10 55536045 55536081 -84780684 + AT_rich Low_complexity Low_complexity 1 36 0 21 107 0 0 chr10 55536197 55536281 -84780484 + AT_rich Low_complexity Low_complexity 1 84 0 1514 183 22 22 chr10 55536663 55536974 -84779791 - MER44D DNA MER2_type -5 604 24 14577 156 23 33 chr10 55536979 55539723 -84777042 - Tigger2 DNA MER2_type 0 2718 2 343 188 43 0 chr10 55540516 55540585 -84776180 - MER63 DNA MER1_type -86 750 679 2150 75 0 14 chr10 55540749 55541027 -84775738 - AluSq SINE Alu -25 288 15 2170 114 0 22 chr10 55541803 55542120 -84774645 - AluSg SINE Alu 0 310 1 1214 258 41 22 chr10 55542215 55542580 -84774185 + MLT1A2 LTR MaLR 1 372 -2 243 295 194 0 chr10 55543125 55543254 -84773511 - MLT1J LTR MaLR -355 156 3 210 303 56 0 chr10 55544591 55544680 -84772085 + MIR SINE MIR 166 259 -3 26 0 0 0 chr10 55545851 55545877 -84770888 + AT_rich Low_complexity Low_complexity 1 26 0 2212 92 3 32 chr10 55545888 55546202 -84770563 + AluSp SINE Alu 4 308 -5 339 254 41 8 chr10 55546337 55546459 -84770306 - L1MC3 LINE L1 0 7785 7660 875 186 16 79 chr10 55546464 55546716 -84770049 + MLT1A1 LTR MaLR 5 240 -125 3398 141 60 21 chr10 55546753 55547385 -84769380 + MER51D LTR ERV1 1 657 0 634 206 15 8 chr10 55547385 55547516 -84769249 + MLT1A1 LTR MaLR 231 362 -3 765 192 58 6 chr10 55547517 55547689 -84769076 - L1MC3 LINE L1 -120 7665 7485 306 140 0 0 chr10 55547831 55547881 -84768884 + LTR38 LTR ERV1 1 50 -506 1037 276 20 61 chr10 55548044 55548298 -84768467 + LTR38 LTR ERV1 178 412 -144 2359 76 0 22 chr10 55548298 55548614 -84768151 - AluY SINE Alu -2 309 1 1037 276 20 61 chr10 55548614 55548754 -84768011 + LTR38 LTR ERV1 412 556 0 514 297 55 59 chr10 55548793 55549264 -84767501 + MLT1J LTR MaLR 1 486 -2 247 167 0 0 chr10 55551051 55551087 -84765678 + MER34C LTR ERV1 1 36 -549 * 1307 240 51 73 chr10 55551055 55551588 -84765177 + MER39 LTR ERV1 5 707 0 539 281 113 12 chr10 55552818 55552978 -84763787 + MER5B DNA MER1_type 1 176 -2 323 281 30 2 chr10 55553044 55553134 -84763631 - MER5A DNA MER1_type -77 112 8 687 257 88 0 chr10 55553471 55553642 -84763123 - MER45 DNA AcHobo -853 187 2 272 349 94 65 chr10 55554203 55554555 -84762210 - L2 LINE L2 -463 2851 2490 269 238 0 79 chr10 55555160 55555261 -84761504 - HAL1 LINE L1 0 2507 2415 1372 281 131 87 chr10 55555770 55556966 -84759799 - HAL1 LINE L1 -237 2270 963 1941 90 40 75 chr10 55556966 55557288 -84759477 + AluSq SINE Alu 1 311 -2 1372 281 131 87 chr10 55557288 55557957 -84758808 - HAL1 LINE L1 -1544 963 324 342 45 0 0 chr10 55557996 55558040 -84758725 + (CA)n Simple_repeat Simple_repeat 1 44 0 1680 183 35 23 chr10 55558572 55558916 -84757849 + MER7A DNA MER2_type 1 346 0 274 339 106 23 chr10 55559085 55559303 -84757462 - L2 LINE L2 -358 2956 2721 413 201 130 26 chr10 55559530 55559684 -84757081 + MER53 DNA DNA 1 170 -19 1064 299 54 3 chr10 55560017 55560408 -84756357 - L1ME1 LINE L1 -4 6162 5752 1218 133 0 0 chr10 55560545 55560718 -84756047 + AluSg/x SINE Alu 126 298 -14 1123 204 41 44 chr10 55560740 55561059 -84755706 - LTR52 LTR ERVL -101 320 3 2508 334 52 14 chr10 55561953 55563081 -84753684 - L2 LINE L2 -268 3045 1878 211 378 9 9 chr10 55563139 55563250 -84753515 - MIR SINE MIR -124 138 28 514 236 103 55 chr10 55564108 55564273 -84752492 + MER52A LTR ERV1 1 173 -1582 * 4028 158 108 33 chr10 55564260 55565018 -84751747 + MER52A LTR ERV1 620 1434 -321 1036 189 5 5 chr10 55565049 55565255 -84751510 + L1MC1 LINE L1 5945 6150 -183 414 0 0 0 chr10 55565575 55565621 -84751144 + (CA)n Simple_repeat Simple_repeat 2 47 0 507 346 0 13 chr10 55565684 55565843 -84750922 - MIR SINE MIR -105 157 1 434 287 88 56 chr10 55565848 55566099 -84750666 + L2 LINE L2 2832 3090 -223 291 348 30 37 chr10 55566218 55566382 -84750383 - MER5B DNA MER1_type -5 173 11 240 343 6 88 chr10 55566399 55566580 -84750185 + L2 LINE L2 3148 3313 0 300 280 47 19 chr10 55567015 55567122 -84749643 + LTR40b LTR ERVL 1 110 -352 3268 264 143 25 chr10 55567297 55569084 -84747681 - L1M4 LINE L1 -937 5209 3212 498 232 53 33 chr10 55569092 55569243 -84747522 - L1MDa LINE L1 -4867 1673 1520 559 305 92 0 chr10 55572181 55572355 -84744410 + LTR33 LTR ERVL 5 194 -327 279 0 0 0 chr10 55572569 55572600 -84744165 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr10 55572804 55572840 -84743925 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr10 55573551 55573581 -84743184 + AT_rich Low_complexity Low_complexity 1 30 0 1441 172 53 58 chr10 55573843 55574220 -84742545 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr10 55574521 55574541 -84742224 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 21 57 0 0 chr10 55575747 55575782 -84740983 + AT_rich Low_complexity Low_complexity 1 35 0 33 73 0 0 chr10 55577907 55577975 -84738790 + AT_rich Low_complexity Low_complexity 1 68 0 25 102 0 0 chr10 55578024 55578112 -84738653 + AT_rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr10 55578393 55578415 -84738350 + AT_rich Low_complexity Low_complexity 1 22 0 285 236 8 65 chr10 55578514 55578608 -84738157 + CT-rich Low_complexity Low_complexity 4 91 -28 1026 119 0 36 chr10 55578608 55578776 -84737989 - L1PA3 LINE L1 -3 6152 5991 285 236 8 65 chr10 55578776 55578804 -84737961 + CT-rich Low_complexity Low_complexity 91 119 0 39 0 0 0 chr10 55579774 55579813 -84736952 + AT_rich Low_complexity Low_complexity 1 39 0 30 45 0 0 chr10 55580180 55580224 -84736541 + AT_rich Low_complexity Low_complexity 1 44 0 348 64 0 0 chr10 55580676 55580723 -84736042 + (TG)n Simple_repeat Simple_repeat 2 48 0 690 243 17 17 chr10 55581592 55581765 -84735000 + LTR28 LTR ERV1 1 173 -847 14536 153 21 24 chr10 55581781 55582797 -84733968 + LTR28-int LTR ERV1 1680 2698 -4393 1787 118 8 11 chr10 55582797 55583060 -84733705 + AluSg SINE Alu 49 310 0 14536 153 21 24 chr10 55583060 55584470 -84732295 + LTR28-int LTR ERV1 2698 4098 -2993 5466 135 5 1 chr10 55584616 55585415 -84731350 + LTR28-int LTR ERV1 4750 5551 -1540 5378 107 18 5 chr10 55585407 55586181 -84730584 + LTR28-int LTR ERV1 6308 7091 0 * 560 212 18 174 chr10 55586181 55586463 -84730302 + LTR28 LTR ERV1 1 895 -841 561 242 6 75 chr10 55586474 55586635 -84730130 + MER52A LTR ERV1 1079 1228 -527 242 310 0 0 chr10 55587382 55587440 -84729325 - L2 LINE L2 -1 3271 3214 263 348 77 19 chr10 55587893 55588048 -84728717 - L2 LINE L2 -221 3092 2929 699 286 63 17 chr10 55589288 55589526 -84727239 + MIR SINE MIR 1 249 -13 200 333 50 44 chr10 55589901 55590060 -84726705 - MIR SINE MIR -54 208 49 513 200 124 0 chr10 55590351 55590456 -84726309 + FLAM_A SINE Alu 12 129 -13 28 29 0 0 chr10 55590745 55590780 -84725985 + AT_rich Low_complexity Low_complexity 1 35 0 1142 261 61 17 chr10 55592300 55592775 -84723990 - MER114 LTR ERV -4 644 149 310 283 118 0 chr10 55592799 55592951 -84723814 - MER114 LTR ERV -478 170 1 21 0 0 0 chr10 55592999 55593020 -84723745 + AT_rich Low_complexity Low_complexity 1 21 0 33 56 0 0 chr10 55593280 55593334 -84723431 + AT_rich Low_complexity Low_complexity 1 54 0 318 315 28 39 chr10 55593500 55593681 -84723084 - L1MC4 LINE L1 0 8042 7864 224 333 130 0 chr10 55593916 55594039 -84722726 - L2 LINE L2 -8 3305 3167 231 263 13 0 chr10 55594105 55594181 -84722584 + MER114 LTR ERV 94 170 -478 297 358 18 36 chr10 55594226 55594391 -84722374 - L2 LINE L2 -238 3075 2914 615 263 16 32 chr10 55594511 55594697 -84722068 + MER58C DNA MER1_type 7 189 -26 801 314 16 12 chr10 55594724 55594982 -84721783 - L2 LINE L2 -554 2760 2502 1502 262 62 56 chr10 55596636 55597300 -84719465 + L1ME3 LINE L1 5480 6147 -15 21 0 0 0 chr10 55597473 55597494 -84719271 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 55599601 55599622 -84717143 + (TC)n Simple_repeat Simple_repeat 2 22 0 189 196 0 0 chr10 55599624 55599670 -84717095 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 239 225 34 34 chr10 55599678 55599767 -84716998 - L1MC4 LINE L1 -1339 6703 6615 22 56 0 0 chr10 55600477 55600513 -84716252 + AT_rich Low_complexity Low_complexity 1 36 0 191 316 13 72 chr10 55600844 55600996 -84715769 - MIR SINE MIR 0 262 120 533 332 44 26 chr10 55601221 55601447 -84715318 - MIR SINE MIR -25 237 8 702 88 0 0 chr10 55601903 55602005 -84714760 - AluSg/x SINE Alu -12 297 196 493 138 32 8 chr10 55602779 55602902 -84713863 + GA-rich Low_complexity Low_complexity 5 130 0 634 238 122 43 chr10 55604864 55605167 -84711598 - MER46C DNA MER2_type -10 328 2 357 301 22 22 chr10 55606008 55606144 -84710621 + MER91A DNA MER1_type 17 152 -44 181 356 0 41 chr10 55606524 55606597 -84710168 + MIR SINE MIR 29 98 -164 21 0 0 0 chr10 55608055 55608076 -84708689 + AT_rich Low_complexity Low_complexity 1 21 0 33 56 0 0 chr10 55608247 55608301 -84708464 + AT_rich Low_complexity Low_complexity 1 54 0 269 247 26 0 chr10 55609174 55609251 -84707514 + MER116 DNA Mariner 2 80 0 188 0 74 0 chr10 55609875 55609902 -84706863 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 6679 38 0 0 chr10 55609924 55610723 -84706042 + L1PA5 LINE L1 5354 6152 -2 219 244 0 0 chr10 55610813 55610854 -84705911 + (TATG)n Simple_repeat Simple_repeat 4 44 0 186 43 0 0 chr10 55610906 55610929 -84705836 + (CA)n Simple_repeat Simple_repeat 2 24 0 258 136 0 0 chr10 55611441 55611485 -84705280 + (A)n Simple_repeat Simple_repeat 1 44 0 215 125 25 0 chr10 55611604 55611644 -84705121 + GA-rich Low_complexity Low_complexity 2 42 0 425 311 0 66 chr10 55611715 55611898 -84704867 - MIR SINE MIR -64 198 28 211 179 30 0 chr10 55612090 55612157 -84704608 + (TA)n Simple_repeat Simple_repeat 1 69 0 288 77 0 0 chr10 55612190 55612229 -84704536 + (CA)n Simple_repeat Simple_repeat 2 40 0 221 247 12 0 chr10 55612309 55612390 -84704375 + (TA)n Simple_repeat Simple_repeat 1 82 0 935 228 28 9 chr10 55613903 55614118 -84702647 + MER58A DNA MER1_type 1 219 -5 1862 87 4 0 chr10 55614966 55615219 -84701546 + LTR8A LTR ERV1 2 255 -472 266 188 0 0 chr10 55615214 55615262 -84701503 + MER41A LTR ERV1 507 554 0 * 1529 211 100 39 chr10 55615386 55615826 -84700939 + LTR8A LTR ERV1 259 725 -2 1962 172 3 8 chr10 55615964 55616319 -84700446 + MER41B LTR ERV1 1 353 -282 245 268 48 73 chr10 55616441 55616713 -84700052 - L1M4 LINE L1 -2083 4063 3799 21 0 0 0 chr10 55616859 55616880 -84699885 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 55616919 55616941 -84699824 + AT_rich Low_complexity Low_complexity 1 22 0 771 155 0 31 chr10 55618539 55618668 -84698097 - AluSq/x SINE Alu -188 125 1 739 163 202 11 chr10 55619023 55619201 -84697564 + MER41B LTR ERV1 424 635 0 21 36 0 0 chr10 55619445 55619473 -84697292 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr10 55619573 55619624 -84697141 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr10 55620186 55620209 -84696556 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr10 55620577 55620605 -84696160 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 55620700 55620729 -84696036 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 55620984 55621005 -84695760 + AT_rich Low_complexity Low_complexity 1 21 0 1808 163 0 7 chr10 55622164 55622458 -84694307 - AluJb SINE Alu -10 302 11 23 0 0 0 chr10 55622977 55623000 -84693765 + AT_rich Low_complexity Low_complexity 1 23 0 238 200 75 12 chr10 55624348 55624428 -84692337 + L1MA8 LINE L1 6204 6288 -3 242 56 28 0 chr10 55625079 55625115 -84691650 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 1271 200 39 49 chr10 55625229 55625534 -84691231 - AluJo SINE Alu -5 307 6 2369 97 0 0 chr10 55625692 55626000 -84690765 + AluSg SINE Alu 1 308 -2 725 313 169 3 chr10 55626020 55626410 -84690355 + L2 LINE L2 1994 2448 -866 183 372 41 25 chr10 55626684 55626805 -84689960 + MIR3 SINE MIR 70 192 -16 2192 102 10 0 chr10 55627155 55627459 -84689306 + AluSc SINE Alu 3 309 0 856 333 62 65 chr10 55627990 55628811 -84687954 + L2 LINE L2 1989 2807 -507 4512 134 1 0 chr10 55628811 55629459 -84687306 + MER52-int LTR ERV1 4657 5305 -1786 277 230 15 37 chr10 55630893 55631028 -84685737 + A-rich Low_complexity Low_complexity 3 134 0 262 167 0 42 chr10 55631075 55631147 -84685618 + GA-rich Low_complexity Low_complexity 1 69 0 4005 148 23 73 chr10 55631147 55631972 -84684793 + LTR1 LTR ERV1 1 784 -1 11495 199 50 55 chr10 55631976 55632614 -84684151 + HUERS-P2 LTR ERV1 5 644 -2444 2238 70 0 0 chr10 55632614 55632930 -84683835 - AluY SINE Alu 0 316 1 11495 199 50 55 chr10 55632930 55635324 -84681441 + HUERS-P2 LTR ERV1 644 3088 0 1317 142 50 137 chr10 55635325 55635726 -84681039 + LTR1 LTR ERV1 8 373 -412 * 1619 143 54 14 chr10 55635706 55635986 -84680779 + LTR1 LTR ERV1 495 785 0 276 244 49 0 chr10 55635987 55636069 -84680696 + GA-rich Low_complexity Low_complexity 3 88 0 235 279 0 0 chr10 55636071 55636132 -84680633 + (CATA)n Simple_repeat Simple_repeat 3 63 0 209 119 24 0 chr10 55636141 55636183 -84680582 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 347 307 109 8 chr10 55637055 55637218 -84679547 - MIR SINE MIR -71 191 11 6900 185 27 13 chr10 55637798 55640168 -84676597 + L1PA16 LINE L1 3759 6164 -2 27 0 0 0 chr10 55640182 55640209 -84676556 + AT_rich Low_complexity Low_complexity 1 27 0 1731 136 78 17 chr10 55641234 55641580 -84675185 - AluSx SINE Alu 0 364 1 196 273 50 101 chr10 55641861 55641960 -84674805 + L2 LINE L2 3137 3230 -42 213 354 44 44 chr10 55642055 55642213 -84674552 - MIR SINE MIR -96 166 9 210 143 0 0 chr10 55642872 55642907 -84673858 + (TATG)n Simple_repeat Simple_repeat 4 38 0 191 36 36 0 chr10 55643214 55643242 -84673523 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1683 116 7 76 chr10 55643551 55643853 -84672912 - MER1B DNA MER1_type 0 339 59 252 335 38 10 chr10 55644083 55644292 -84672473 - L1M4 LINE L1 -852 5294 5080 367 339 24 29 chr10 55644471 55644852 -84671913 - L1M4 LINE L1 -1310 4836 4458 734 271 29 0 chr10 55645376 55645546 -84671219 + MER45A DNA AcHobo 4 178 0 2060 112 3 34 chr10 55646154 55646476 -84670289 - AluSq SINE Alu -1 312 1 432 337 140 42 chr10 55647132 55648256 -84668509 + L2 LINE L2 1782 3035 -237 30 89 0 0 chr10 55648520 55648599 -84668166 + AT_rich Low_complexity Low_complexity 1 79 0 3825 146 5 64 chr10 55648691 55649425 -84667340 + LTR8 LTR ERV1 1 691 0 265 306 0 0 chr10 55649432 55649517 -84667248 + CT-rich Low_complexity Low_complexity 1 85 0 200 323 16 0 chr10 55649528 55649590 -84667175 + L2 LINE L2 3251 3313 0 22 35 0 0 chr10 55651114 55651143 -84665622 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 55651219 55651241 -84665524 + AT_rich Low_complexity Low_complexity 1 22 0 316 244 70 0 chr10 55652415 55652501 -84664264 - L2 LINE L2 -1 3312 3221 238 284 114 0 chr10 55653168 55653256 -84663509 + L2 LINE L2 3216 3313 0 31 0 0 0 chr10 55653947 55653978 -84662787 + AT_rich Low_complexity Low_complexity 1 31 0 2379 200 44 33 chr10 55654301 55654851 -84661914 - L1MB1 LINE L1 -67 6122 5567 227 175 63 0 chr10 55654862 55654925 -84661840 + MER69 DNA AcHobo 2359 2425 -101 328 226 12 30 chr10 55655236 55655400 -84661365 + GA-rich Low_complexity Low_complexity 4 164 0 1408 206 21 94 chr10 55655588 55656015 -84660750 + MSTD LTR MaLR 1 396 0 658 43 32 0 chr10 55656996 55657089 -84659676 - THE1-int LTR MaLR -5 1575 1480 2025 165 48 14 chr10 55657583 55657935 -84658830 - THE1B LTR MaLR 0 364 1 11009 99 5 19 chr10 55657935 55658255 -84658510 - THE1B-int LTR MaLR 0 1580 1257 2061 145 0 0 chr10 55658255 55658565 -84658200 - AluSq SINE Alu 0 313 4 11009 99 5 19 chr10 55658565 55659846 -84656919 - THE1B-int LTR MaLR -323 1257 2 1966 150 51 23 chr10 55659847 55660201 -84656564 - THE1B LTR MaLR 0 364 1 2321 232 47 91 chr10 55661603 55662432 -84654333 - MER21B LTR ERV1 -52 811 19 373 256 0 24 chr10 55662454 55662536 -84654229 - MER21B LTR ERV1 -773 90 11 378 258 71 39 chr10 55662608 55662763 -84654002 - L1ME1 LINE L1 0 6166 6007 358 276 84 88 chr10 55662891 55663152 -84653613 - L2 LINE L2 -2 3311 3052 486 327 15 73 chr10 55663736 55664066 -84652699 + HAL1 LINE L1 589 899 -1608 1842 127 31 0 chr10 55664472 55664763 -84652002 - AluSx SINE Alu -11 301 2 928 215 10 5 chr10 55666652 55666857 -84649908 - L1MD1 LINE L1 -23 6613 6408 2377 239 59 27 chr10 55666860 55668281 -84648484 - L1MD1 LINE L1 -458 6178 4715 1558 238 18 0 chr10 55668293 55668625 -84648140 - MLT2D LTR ERVL -48 366 29 22 0 0 0 chr10 55668640 55668662 -84648103 + AT_rich Low_complexity Low_complexity 1 22 0 3921 179 38 18 chr10 55668662 55669456 -84647309 - ERVL-D LTR ERVL 0 5764 4955 1240 250 55 18 chr10 55669457 55669969 -84646796 - L1MD1 LINE L1 -2661 3879 3349 1326 234 18 79 chr10 55669998 55670439 -84646326 - L1MD1 LINE L1 -6095 445 32 235 336 86 23 chr10 55671569 55671697 -84645068 + MIR SINE MIR 77 212 -50 21 57 0 0 chr10 55671851 55671886 -84644879 + AT_rich Low_complexity Low_complexity 1 35 0 2307 54 3 24 chr10 55673112 55673408 -84643357 + AluY SINE Alu 6 295 -16 280 305 0 0 chr10 55673461 55673543 -84643222 + CT-rich Low_complexity Low_complexity 3 84 0 31 0 0 0 chr10 55673619 55673650 -84643115 + AT_rich Low_complexity Low_complexity 1 31 0 25 51 0 0 chr10 55673708 55673747 -84643018 + AT_rich Low_complexity Low_complexity 1 39 0 1540 201 0 26 chr10 55675119 55675423 -84641342 + AluJo SINE Alu 1 296 -16 316 219 123 52 chr10 55676043 55676198 -84640567 + L2 LINE L2 3133 3298 -15 2717 86 23 15 chr10 55676519 55676914 -84639851 + L1PA7 LINE L1 5754 6151 -3 193 393 47 0 chr10 55677290 55677397 -84639368 + L2 LINE L2 3152 3263 -9 26 30 0 0 chr10 55678198 55678231 -84638534 + AT_rich Low_complexity Low_complexity 1 33 0 2302 88 3 0 chr10 55678508 55678803 -84637962 - AluSp SINE Alu -17 296 1 25 51 0 0 chr10 55679123 55679162 -84637603 + AT_rich Low_complexity Low_complexity 1 39 0 235 347 27 34 chr10 55679876 55680023 -84636742 - MIR SINE MIR -112 150 5 26 0 0 0 chr10 55680033 55680059 -84636706 + AT_rich Low_complexity Low_complexity 1 26 0 260 137 20 0 chr10 55680059 55680110 -84636655 + (TA)n Simple_repeat Simple_repeat 1 52 0 1961 140 0 0 chr10 55681622 55681935 -84634830 + AluSg SINE Alu 1 313 0 25 0 0 0 chr10 55682372 55682397 -84634368 + AT_rich Low_complexity Low_complexity 1 25 0 325 237 79 40 chr10 55682598 55682750 -84634015 + MIR SINE MIR 105 262 0 301 350 49 0 chr10 55683032 55683175 -84633590 + MIR SINE MIR 113 262 0 23 33 0 0 chr10 55683177 55683207 -84633558 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 55684108 55684131 -84632634 + (GA)n Simple_repeat Simple_repeat 1 23 0 269 318 68 36 chr10 55684358 55684610 -84632155 + L1MEd LINE L1 934 1193 -4926 286 348 21 69 chr10 55684708 55684937 -84631828 + L1MEd LINE L1 401 602 -5517 255 31 0 0 chr10 55684937 55684969 -84631796 + (CA)n Simple_repeat Simple_repeat 2 33 0 286 348 21 69 chr10 55684969 55685162 -84631603 + L1MEd LINE L1 602 803 -5316 4511 231 48 43 chr10 55685335 55687900 -84628865 + L1PA15 LINE L1 1 2552 -4245 2107 163 22 0 chr10 55687900 55688256 -84628509 + THE1B LTR MaLR 1 364 0 8854 136 62 13 chr10 55688256 55689762 -84627003 + THE1B-int LTR MaLR 1 1580 0 1714 174 38 49 chr10 55689762 55690130 -84626635 + THE1B LTR MaLR 1 364 0 4511 231 48 43 chr10 55690130 55690648 -84626117 + L1PA15 LINE L1 2551 3311 -3486 5247 189 18 18 chr10 55690649 55692448 -84624317 + L1PA15 LINE L1 4833 6816 0 308 335 104 33 chr10 55692553 55692765 -84624000 + L1MEd LINE L1 1026 1252 -4867 225 187 49 106 chr10 55692775 55692898 -84623867 + L1M4 LINE L1 4891 5006 -1140 1607 237 17 8 chr10 55692901 55693259 -84623506 + MLT1A1 LTR MaLR 1 361 -4 230 226 0 32 chr10 55693273 55693335 -84623430 + A-rich Low_complexity Low_complexity 1 60 0 201 176 0 88 chr10 55694056 55694137 -84622628 + (CATATA)n Simple_repeat Simple_repeat 3 77 -8 1735 173 55 0 chr10 55694137 55694467 -84622298 - MER7A DNA MER2_type 0 346 1 201 176 0 88 chr10 55694467 55694476 -84622289 + (CATATA)n Simple_repeat Simple_repeat 77 85 0 1198 218 54 4 chr10 55694476 55694756 -84622009 - MER2 DNA MER2_type -3 342 49 341 22 22 0 chr10 55694800 55694846 -84621919 + (TA)n Simple_repeat Simple_repeat 1 47 0 315 49 0 0 chr10 55694889 55694930 -84621835 + (TG)n Simple_repeat Simple_repeat 1 41 0 714 230 78 0 chr10 55695039 55695243 -84621522 + Charlie1 DNA MER1_type 7 226 -2535 697 133 37 15 chr10 55695240 55695375 -84621390 + Charlie1 DNA MER1_type 2623 2760 -1 * 22 111 0 0 chr10 55695970 55696069 -84620696 + AT_rich Low_complexity Low_complexity 1 99 0 351 65 0 0 chr10 55696725 55696771 -84619994 + (TG)n Simple_repeat Simple_repeat 1 46 0 338 274 41 59 chr10 55698219 55698463 -84618302 + L1MC5 LINE L1 6814 7054 -907 2064 141 39 36 chr10 55698463 55698826 -84617939 + THE1B LTR MaLR 1 364 0 338 274 41 59 chr10 55698826 55698851 -84617914 + L1MC5 LINE L1 7054 7078 -883 354 250 189 79 chr10 55699081 55699509 -84617256 + L1MC5 LINE L1 7246 7720 -241 25 75 0 0 chr10 55699899 55699952 -84616813 + AT_rich Low_complexity Low_complexity 1 53 0 420 20 0 0 chr10 55700108 55700129 -84616636 + (TG)n Simple_repeat Simple_repeat 1 70 0 420 20 0 0 chr10 55700129 55700178 -84616587 + (TG)n Simple_repeat Simple_repeat 2 50 0 2213 99 3 0 chr10 55700201 55700493 -84616272 - AluSp SINE Alu -20 293 1 227 319 0 66 chr10 55701739 55701830 -84614935 - MER5A DNA MER1_type -28 161 77 507 158 0 0 chr10 55701881 55701963 -84614802 - MER20 DNA MER1_type -3 216 135 225 191 24 0 chr10 55701970 55702012 -84614753 + MER34 LTR ERV1 9 51 -491 261 0 0 0 chr10 55702012 55702041 -84614724 + (A)n Simple_repeat Simple_repeat 1 29 0 998 196 77 132 chr10 55702061 55702104 -84614661 + MER39 LTR ERV1 271 315 -392 2031 111 0 0 chr10 55702104 55702411 -84614354 + AluSc SINE Alu 1 307 0 998 196 77 132 chr10 55702411 55702820 -84613945 + MER39 LTR ERV1 315 699 -8 550 231 32 51 chr10 55702812 55702968 -84613797 - MER20 DNA MER1_type -62 157 5 * 413 305 86 27 chr10 55703521 55703708 -84613057 + L3 LINE CR1 554 751 -826 4782 182 27 21 chr10 55703730 55704373 -84612392 + L1MA3 LINE L1 5175 5813 -492 1721 155 3 31 chr10 55704373 55704664 -84612101 + AluSx SINE Alu 1 283 -29 1404 150 0 40 chr10 55704437 55704664 -84612101 + AluSg/x SINE Alu 66 318 0 181 0 114 0 chr10 55704664 55704699 -84612066 + A-rich Low_complexity Low_complexity 2 180 0 1986 188 15 34 chr10 55704699 55705172 -84611593 + L1MA4 LINE L1 5828 6291 -9 234 0 0 0 chr10 55705177 55705203 -84611562 + (CAA)n Simple_repeat Simple_repeat 2 27 0 377 382 60 16 chr10 55705268 55705585 -84611180 + L3 LINE CR1 861 1191 -386 21 0 0 0 chr10 55705652 55705673 -84611092 + AT_rich Low_complexity Low_complexity 1 21 0 360 233 35 23 chr10 55706008 55706180 -84610585 + (TA)n Simple_repeat Simple_repeat 2 175 0 23 0 0 0 chr10 55706595 55706618 -84610147 + AT_rich Low_complexity Low_complexity 1 23 0 302 302 7 36 chr10 55707317 55707456 -84609309 - MIR SINE MIR 0 262 128 1696 126 10 71 chr10 55707461 55707632 -84609133 - AluSc SINE Alu -16 293 148 465 66 0 0 chr10 55707632 55707693 -84609072 + (TA)n Simple_repeat Simple_repeat 2 62 0 1696 126 10 71 chr10 55707693 55707831 -84608934 - AluSc SINE Alu -161 148 3 722 193 0 35 chr10 55708348 55708493 -84608272 - FLAM_A SINE Alu 0 142 3 1901 323 91 13 chr10 55709670 55710757 -84606008 - L2 LINE L2 -12 3301 2128 1810 158 16 3 chr10 55712820 55713123 -84603642 + AluJb SINE Alu 1 307 -5 22 35 0 0 chr10 55713630 55713659 -84603106 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 55713804 55713827 -84602938 + AT_rich Low_complexity Low_complexity 1 23 0 542 226 65 0 chr10 55714056 55714224 -84602541 - MER3 DNA MER1_type -30 179 1 607 332 158 29 chr10 55714376 55714969 -84601796 - L2 LINE L2 -75 3238 2554 413 211 0 9 chr10 55716095 55716204 -84600561 + (TA)n Simple_repeat Simple_repeat 2 109 0 263 172 0 17 chr10 55716841 55716899 -84599866 + CT-rich Low_complexity Low_complexity 1 57 0 6313 52 15 1 chr10 55718009 55718883 -84597882 + L1P LINE L1 2113 2998 -3148 378 268 116 56 chr10 55719280 55719564 -84597201 - L2 LINE L2 -140 3173 2873 1406 185 32 4 chr10 55719714 55719995 -84596770 - AluJo SINE Alu -10 302 14 26 30 0 0 chr10 55721254 55721287 -84595478 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr10 55721316 55721338 -84595427 + AT_rich Low_complexity Low_complexity 1 22 0 249 346 11 34 chr10 55721967 55722146 -84594619 - L2 LINE L2 -17 3296 3122 568 68 0 0 chr10 55723150 55723224 -84593541 - THE1C LTR MaLR -301 74 1 232 338 46 60 chr10 55723341 55723492 -84593273 + L3 LINE CR1 1308 1456 -121 1143 113 0 13 chr10 55725094 55725253 -84591512 + AluSg/x SINE Alu 135 291 -21 477 266 101 0 chr10 55726327 55726485 -84590280 - MIR SINE MIR 0 262 89 288 269 58 0 chr10 55726557 55726661 -84590104 - MER104 DNA Tc2 -67 113 4 263 344 104 41 chr10 55726719 55726940 -84589825 + L2 LINE L2 1184 1418 -1896 1417 60 0 0 chr10 55727134 55727301 -84589464 + AluY SINE Alu 130 296 -15 202 292 73 25 chr10 55728135 55728261 -84588504 + MIR SINE MIR 76 205 -3 2211 84 9 50 chr10 55730286 55730609 -84586156 + AluSq SINE Alu 1 310 -3 418 312 89 49 chr10 55731299 55731546 -84585219 + L1ME4a LINE L1 5626 5882 -239 235 304 62 62 chr10 55731553 55731665 -84585100 + L2 LINE L2 2766 2877 -437 514 270 230 15 chr10 55731691 55731961 -84584804 + L2 LINE L2 2980 3307 -6 354 23 0 0 chr10 55732753 55732781 -84583984 + (CA)n Simple_repeat Simple_repeat 1 71 0 354 23 0 0 chr10 55732781 55732824 -84583941 + (CA)n Simple_repeat Simple_repeat 2 44 0 545 249 18 18 chr10 55733274 55733439 -84583326 + L1ME LINE L1 5621 5785 -336 1293 236 34 6 chr10 55734431 55734757 -84582008 + MER58B DNA MER1_type 7 341 0 280 244 89 11 chr10 55735518 55735608 -84581157 - HAL1 LINE L1 -2375 132 36 1011 179 73 6 chr10 55735625 55735804 -84580961 + MER8 DNA MER2_type 24 214 -25 477 0 0 0 chr10 55735811 55735864 -84580901 + (TG)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr10 55735878 55735898 -84580867 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1049 146 0 19 chr10 55735906 55736064 -84580701 - AluSg/x SINE Alu -37 273 119 2713 136 60 10 chr10 55737001 55737486 -84579279 - Tigger3b DNA MER2_type -722 509 1 545 167 10 0 chr10 55737489 55737591 -84579174 - L1MB5 LINE L1 -54 6120 6018 2200 110 3 0 chr10 55737621 55737913 -84578852 + AluSx SINE Alu 1 293 -19 1066 247 43 39 chr10 55739003 55739596 -84577169 + L1ME3A LINE L1 5316 5905 -265 318 308 90 0 chr10 55739686 55739819 -84576946 + L1ME3A LINE L1 6026 6170 0 808 161 0 0 chr10 55739824 55739942 -84576823 - FLAM_C SINE Alu -15 118 1 326 240 39 78 chr10 55740947 55741101 -84575664 - MIR SINE MIR -20 242 95 1160 176 29 50 chr10 55741335 55741614 -84575151 + MLT1B LTR MaLR 1 273 -117 324 289 26 19 chr10 55743013 55743169 -84573596 + CT-rich Low_complexity Low_complexity 1 157 0 371 298 29 29 chr10 55744167 55744372 -84572393 + MLT1J2 LTR MaLR 1 205 -245 369 264 146 113 chr10 55747443 55747814 -84568951 - L2 LINE L2 -5 3267 2885 24 0 0 0 chr10 55747984 55748008 -84568757 + AT_rich Low_complexity Low_complexity 1 24 0 627 250 43 32 chr10 55748022 55748210 -84568555 + L2 LINE L2 3100 3289 -24 1119 261 100 12 chr10 55748630 55749132 -84567633 + L1PBa LINE L1 6 551 -6312 1073 140 70 0 chr10 55749200 55749400 -84567365 - L1PBa LINE L1 -5890 973 760 1376 221 40 20 chr10 55749417 55749984 -84566781 + L1PBa LINE L1 992 1754 -5109 3340 112 19 8 chr10 55750096 55750688 -84566077 - L1P LINE L1 -2377 3769 3172 1849 259 19 8 chr10 55750701 55751188 -84565577 + L2 LINE L2 1947 2438 -876 399 235 187 6 chr10 55751486 55751652 -84565113 + L2 LINE L2 2639 2834 -480 2256 108 39 33 chr10 55752817 55753179 -84563586 - THE1B LTR MaLR 0 364 1 474 171 9 72 chr10 55753347 55753458 -84563307 - MER94 DNA DNA 0 134 31 34 65 0 0 chr10 55754699 55754761 -84562004 + AT_rich Low_complexity Low_complexity 1 62 0 628 261 48 34 chr10 55756895 55757102 -84559663 - MER63A DNA MER1_type 0 210 1 220 211 70 42 chr10 55759004 55759075 -84557690 + L2 LINE L2 3195 3267 -5 210 169 17 34 chr10 55759473 55759532 -84557233 + T-rich Low_complexity Low_complexity 3 60 0 795 269 92 38 chr10 55759784 55760130 -84556635 + MLT1A2 LTR MaLR 8 372 -2 358 319 129 12 chr10 55760559 55760722 -84556043 - MIR3 SINE MIR -11 197 16 1694 177 0 3 chr10 55760755 55761080 -84555685 + AluJo SINE Alu 1 324 0 257 282 0 26 chr10 55761098 55761176 -84555589 + MIR SINE MIR 5 80 -182 264 313 27 67 chr10 55761225 55761375 -84555390 - L2 LINE L2 -212 3060 2917 207 0 0 0 chr10 55761448 55761471 -84555294 + (CA)n Simple_repeat Simple_repeat 1 23 0 313 242 98 23 chr10 55761571 55761703 -84555062 + L1ME4a LINE L1 5979 6120 -1 21 0 0 0 chr10 55763623 55763644 -84553121 + AT_rich Low_complexity Low_complexity 1 21 0 8339 99 50 19 chr10 55763888 55765168 -84551597 - Tigger1 DNA MER2_type 0 2418 1100 7915 70 16 2 chr10 55765308 55766372 -84550393 + L1P LINE L1 3603 4681 -1465 342 192 176 16 chr10 55766372 55766497 -84550268 - L2 LINE L2 -1641 1673 1529 238 289 47 52 chr10 55766549 55766760 -84550005 + L1MC4a LINE L1 5721 5930 -1878 2479 127 3 3 chr10 55766815 55767177 -84549588 + THE1B LTR MaLR 3 364 0 603 195 51 0 chr10 55767184 55767302 -84549463 + MLT1B LTR MaLR 267 390 0 734 180 0 0 chr10 55769201 55769340 -84547425 + L1P LINE L1 1552 1690 -4456 435 208 89 0 chr10 55769628 55769729 -84547036 - L2 LINE L2 -18 3295 3186 36 0 0 0 chr10 55769742 55769778 -84546987 + AT_rich Low_complexity Low_complexity 1 36 0 1749 144 10 46 chr10 55770015 55770320 -84546445 + AluSx SINE Alu 1 294 -18 603 316 139 23 chr10 55770332 55770920 -84545845 - L2 LINE L2 -192 3121 2337 191 273 61 50 chr10 55771560 55771659 -84545106 + L3 LINE CR1 178 277 -1300 2277 103 0 0 chr10 55771960 55772270 -84544495 - AluY SINE Alu -1 310 1 180 382 15 0 chr10 55772322 55772390 -84544375 + MIR SINE MIR 2 70 -192 270 0 0 0 chr10 55772501 55772531 -84544234 + (TA)n Simple_repeat Simple_repeat 1 30 0 241 295 163 52 chr10 55775385 55775673 -84541092 - HAL1 LINE L1 -6 2501 2182 23 0 0 0 chr10 55775714 55775737 -84541028 + AT_rich Low_complexity Low_complexity 1 23 0 436 309 32 62 chr10 55776017 55776518 -84540247 - HAL1 LINE L1 -776 1731 1246 300 336 29 29 chr10 55776674 55776814 -84539951 - MLT1H LTR MaLR -242 307 168 434 311 48 99 chr10 55776959 55777646 -84539119 - HAL1 LINE L1 -1321 1186 414 328 264 108 16 chr10 55777992 55778121 -84538644 - MIR SINE MIR -105 157 17 22 56 0 0 chr10 55779138 55779174 -84537591 + AT_rich Low_complexity Low_complexity 1 36 0 6693 73 19 6 chr10 55779193 55780456 -84536309 - L1PA7 LINE L1 0 6154 4883 331 21 42 0 chr10 55780984 55781032 -84535733 + (TA)n Simple_repeat Simple_repeat 1 50 0 859 244 150 25 chr10 55781337 55781784 -84534981 - MLT1D LTR MaLR -2 503 1 1995 163 79 21 chr10 55782078 55782407 -84534358 - MER65C LTR ERV1 -19 442 83 1884 168 30 28 chr10 55782407 55782770 -84533995 + THE1B LTR MaLR 1 364 0 1995 163 79 21 chr10 55782770 55782858 -84533907 - MER65C LTR ERV1 -378 83 1 453 122 0 49 chr10 55783843 55783925 -84532840 - MADE1 DNA Mariner 0 80 3 1923 102 0 19 chr10 55784323 55784588 -84532177 + AluY SINE Alu 38 297 -14 33 25 0 0 chr10 55784588 55784628 -84532137 + AT_rich Low_complexity Low_complexity 1 40 0 207 0 0 0 chr10 55785263 55785286 -84531479 + (TG)n Simple_repeat Simple_repeat 2 24 0 180 77 0 0 chr10 55785292 55785318 -84531447 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2225 88 10 0 chr10 55785354 55785661 -84531104 + AluSp SINE Alu 1 310 -3 211 155 0 69 chr10 55786950 55787008 -84529757 + A-rich Low_complexity Low_complexity 3 56 0 21 0 0 0 chr10 55787855 55787876 -84528889 + AT_rich Low_complexity Low_complexity 1 21 0 2229 100 3 0 chr10 55788586 55788877 -84527888 + AluSg SINE Alu 1 292 -18 722 322 86 41 chr10 55788929 55789133 -84527632 + L1M4 LINE L1 4502 4695 -1451 2042 49 94 11 chr10 55789133 55789420 -84527345 + AluY SINE Alu 1 311 0 722 322 86 41 chr10 55789420 55789880 -84526885 + L1M4 LINE L1 4695 5196 -950 3137 139 56 4 chr10 55789897 55790428 -84526337 - L1PA15 LINE L1 -1 6164 5603 306 0 0 0 chr10 55790428 55790462 -84526303 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 738 96 0 0 chr10 55790468 55790572 -84526193 - AluY SINE Alu -33 278 175 1151 72 33 0 chr10 55790580 55790692 -84526073 + AluY SINE Alu 16 136 -175 180 0 0 0 chr10 55790692 55790712 -84526053 + (TA)n Simple_repeat Simple_repeat 2 21 0 1151 72 33 0 chr10 55790712 55790752 -84526013 + AluY SINE Alu 136 173 -138 514 167 0 0 chr10 55790752 55790836 -84525929 - L1PA15 LINE L1 -556 5609 5526 801 323 87 26 chr10 55790847 55791374 -84525391 + L2 LINE L2 2480 3080 -233 288 0 0 0 chr10 55791374 55791406 -84525359 + (TG)n Simple_repeat Simple_repeat 2 33 0 801 323 87 26 chr10 55791406 55791488 -84525277 + L2 LINE L2 3080 3156 -157 1197 186 0 5 chr10 55793185 55793395 -84523370 - AluJb SINE Alu -17 295 87 28 48 0 0 chr10 55793642 55793684 -84523081 + AT_rich Low_complexity Low_complexity 1 42 0 1350 281 57 69 chr10 55793955 55794897 -84521868 + L1MEc LINE L1 1429 2289 -3926 225 0 0 0 chr10 55794897 55794922 -84521843 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 1350 281 57 69 chr10 55794922 55795499 -84521266 + L1MEc LINE L1 2289 2871 -3344 29 47 0 0 chr10 55795666 55795709 -84521056 + AT_rich Low_complexity Low_complexity 1 43 0 1307 228 99 109 chr10 55796337 55797289 -84519476 + LTR1B LTR ERV1 1 1019 -1 762 261 131 4 chr10 55798037 55798489 -84518276 - Zaphod DNA AcHobo -361 3670 3162 919 322 129 30 chr10 55798545 55799104 -84517661 - Zaphod DNA AcHobo -3416 615 2 925 228 42 8 chr10 55801292 55801533 -84515232 + L1MB7 LINE L1 5928 6176 -8 233 163 20 0 chr10 55802037 55802086 -84514679 + (TA)n Simple_repeat Simple_repeat 2 51 0 32 106 0 0 chr10 55802098 55802221 -84514544 + AT_rich Low_complexity Low_complexity 1 123 0 21 0 0 0 chr10 55802818 55802839 -84513926 + AT_rich Low_complexity Low_complexity 1 21 0 790 224 52 56 chr10 55803107 55803339 -84513426 - MER58B DNA MER1_type -1 340 110 373 241 17 35 chr10 55803660 55803776 -84512989 - MER58B DNA MER1_type -34 307 194 574 265 72 24 chr10 55805688 55805937 -84510828 - HAL1 LINE L1 -741 1766 1506 585 197 101 40 chr10 55806219 55806449 -84510316 - MER58 DNA MER1_type -35 2385 49 378 42 0 0 chr10 55807409 55807457 -84509308 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 3243 199 53 30 chr10 55808230 55808665 -84508100 + L1MA4 LINE L1 3801 4265 -1881 404 19 19 0 chr10 55808665 55808718 -84508047 + (CA)n Simple_repeat Simple_repeat 2 55 0 3243 199 53 30 chr10 55808718 55809095 -84507670 + L1MA4 LINE L1 4265 4632 -1514 226 319 80 9 chr10 55809083 55809196 -84507569 - L1MC/D LINE L1 -2170 5638 5518 * 23 33 0 0 chr10 55809344 55809374 -84507391 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr10 55810110 55810151 -84506614 + AT_rich Low_complexity Low_complexity 1 41 0 248 321 107 9 chr10 55810151 55810263 -84506502 + L2 LINE L2 3191 3313 0 21 36 0 0 chr10 55810315 55810343 -84506422 + AT_rich Low_complexity Low_complexity 1 28 0 369 0 0 0 chr10 55810568 55810609 -84506156 + (TG)n Simple_repeat Simple_repeat 1 41 0 248 174 14 43 chr10 55811532 55811601 -84505164 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 181 308 0 0 chr10 55812252 55812304 -84504461 - MIR SINE MIR -122 140 89 183 80 0 0 chr10 55813374 55813399 -84503366 + (TAA)n Simple_repeat Simple_repeat 3 27 0 329 288 27 0 chr10 55813403 55813514 -84503251 - MIR SINE MIR -1 261 148 1523 337 113 6 chr10 55813928 55814733 -84502032 - L2 LINE L2 -612 2702 1812 248 261 117 39 chr10 55814826 55815006 -84501759 - L1 LINE L1 -2305 3841 3648 2027 128 3 0 chr10 55815009 55815307 -84501458 + AluSg SINE Alu 5 303 -7 216 261 0 0 chr10 55815766 55815812 -84500953 + (TG)n Simple_repeat Simple_repeat 1 46 0 2675 311 89 35 chr10 55816116 55817804 -84498961 + L2 LINE L2 1549 3312 -1 189 0 0 0 chr10 55818184 55818205 -84498560 + (TA)n Simple_repeat Simple_repeat 2 22 0 27 29 0 0 chr10 55818687 55818721 -84498044 + AT_rich Low_complexity Low_complexity 1 34 0 4879 168 63 49 chr10 55819682 55821257 -84495508 + L1MA4 LINE L1 4668 6296 -4 387 0 0 0 chr10 55821851 55821894 -84494871 + (CA)n Simple_repeat Simple_repeat 2 44 0 956 245 115 19 chr10 55822742 55823003 -84493762 + MER82 DNA MER2_type 367 652 -1 256 272 48 29 chr10 55823048 55823151 -84493614 - MLT1I LTR MaLR -4 405 301 25 0 0 0 chr10 55824172 55824197 -84492568 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 55824401 55824430 -84492335 + AT_rich Low_complexity Low_complexity 1 29 0 546 293 22 36 chr10 55824629 55824851 -84491914 - L2 LINE L2 -1 3312 3094 2164 74 7 27 chr10 55825600 55825898 -84490867 + AluSg SINE Alu 1 292 -18 357 24 0 0 chr10 55828250 55828292 -84488473 + (TC)n Simple_repeat Simple_repeat 1 42 0 267 31 0 0 chr10 55828291 55828323 -84488442 + (CA)n Simple_repeat Simple_repeat 1 32 0 * 213 39 0 0 chr10 55829020 55829046 -84487719 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 249 300 0 0 chr10 55829138 55829265 -84487500 + A-rich Low_complexity Low_complexity 1 127 0 3651 155 12 28 chr10 55829317 55829999 -84486766 - LTR51 LTR ERV1 0 671 1 667 299 57 6 chr10 55830137 55830314 -84486451 + MER5A DNA MER1_type 1 186 -3 357 24 0 0 chr10 55830472 55830514 -84486251 + (CA)n Simple_repeat Simple_repeat 2 43 0 260 256 37 0 chr10 55830580 55830662 -84486103 + MIR SINE MIR 172 256 -6 21 95 0 0 chr10 55830727 55830790 -84485975 + AT_rich Low_complexity Low_complexity 1 63 0 644 152 129 67 chr10 55830949 55831127 -84485638 + L1MC3 LINE L1 7493 7681 -104 7773 161 59 34 chr10 55831135 55831703 -84485062 + Tigger1 DNA MER2_type 24 577 -1841 1933 135 0 4 chr10 55831703 55831984 -84484781 + AluSg SINE Alu 1 280 -30 7773 161 59 34 chr10 55831984 55832984 -84483781 + Tigger1 DNA MER2_type 577 1630 -788 2606 165 21 27 chr10 55832973 55833453 -84483312 + Tigger1 DNA MER2_type 1942 2418 0 * 314 187 53 0 chr10 55833468 55833543 -84483222 + L1MC3 LINE L1 7699 7777 -8 22 0 0 0 chr10 55833548 55833570 -84483195 + AT_rich Low_complexity Low_complexity 1 22 0 225 220 55 22 chr10 55836990 55837081 -84479684 - L1M LINE L1 -2380 5428 5335 23 0 0 0 chr10 55837093 55837116 -84479649 + AT_rich Low_complexity Low_complexity 1 23 0 220 290 0 0 chr10 55837559 55837628 -84479137 + (TA)n Simple_repeat Simple_repeat 2 70 0 229 215 77 0 chr10 55837628 55837693 -84479072 + L1MCa LINE L1 1995 2064 -4362 * 254 289 0 0 chr10 55837674 55837764 -84479001 + L1MC4 LINE L1 6614 6703 -1339 246 312 0 0 chr10 55837697 55837790 -84478975 - L1MC4 LINE L1 -1336 6706 6614 * 352 310 118 19 chr10 55837927 55838239 -84478526 - MLT1F LTR MaLR -5 537 214 1977 231 101 58 chr10 55839946 55840738 -84476027 + LTR1B LTR ERV1 1 826 0 1074 289 86 12 chr10 55840845 55841264 -84475501 - MLT1D LTR MaLR -53 452 3 331 307 31 53 chr10 55841343 55841571 -84475194 - MLT1K LTR MaLR -1 587 365 934 319 87 21 chr10 55841881 55842308 -84474457 - HERVL40 LTR ERVL -4149 1381 927 1629 256 66 32 chr10 55842617 55843116 -84473649 - LTR40a LTR ERVL 0 519 4 440 308 0 49 chr10 55843800 55843943 -84472822 + MIR SINE MIR 8 143 -119 378 182 27 0 chr10 55844579 55844689 -84472076 + GA-rich Low_complexity Low_complexity 1 113 0 3323 72 21 6 chr10 55845271 55845746 -84471019 - L1PA7 LINE L1 -3 6151 5670 25 51 0 0 chr10 55845966 55846005 -84470760 + AT_rich Low_complexity Low_complexity 1 39 0 210 71 0 0 chr10 55846310 55846338 -84470427 + (T)n Simple_repeat Simple_repeat 1 28 0 25 65 0 0 chr10 55848815 55848861 -84467904 + AT_rich Low_complexity Low_complexity 1 46 0 250 196 20 0 chr10 55848984 55849035 -84467730 - MER70B LTR ERVL -73 505 454 360 0 0 0 chr10 55849360 55849400 -84467365 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1889 66 42 0 chr10 55849400 55849659 -84467106 - L1PA7 LINE L1 -18 6136 5867 657 47 0 0 chr10 55849662 55849747 -84467018 + L1P LINE L1 4998 5082 -1064 1841 136 176 16 chr10 55851675 55851855 -84464910 - MSTA LTR MaLR 0 428 278 186 43 0 0 chr10 55851855 55851878 -84464887 + (GA)n Simple_repeat Simple_repeat 1 23 0 1841 136 176 16 chr10 55851878 55852066 -84464699 - MSTA LTR MaLR -150 278 1 619 215 57 23 chr10 55852072 55852249 -84464516 - MER5A DNA MER1_type 0 189 7 207 0 0 0 chr10 55854451 55854474 -84462291 + (T)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr10 55855190 55855220 -84461545 + AT_rich Low_complexity Low_complexity 1 30 0 967 250 69 16 chr10 55855585 55855874 -84460891 + MER93b LTR ERV1 1 316 -87 1491 224 0 0 chr10 55855874 55856186 -84460579 - AluJo SINE Alu 0 312 1 967 250 69 16 chr10 55856186 55856279 -84460486 + MER93b LTR ERV1 316 403 0 230 146 0 18 chr10 55856540 55856595 -84460170 + (CA)n Simple_repeat Simple_repeat 2 55 0 28 48 0 0 chr10 55857105 55857147 -84459618 + AT_rich Low_complexity Low_complexity 1 42 0 272 273 124 41 chr10 55857597 55857632 -84459133 - MLT1F LTR MaLR -133 434 403 2145 143 34 14 chr10 55857632 55857989 -84458776 - THE1B LTR MaLR 0 364 1 272 273 124 41 chr10 55857989 55858074 -84458691 - MLT1F LTR MaLR -164 403 304 * 377 303 119 69 chr10 55858043 55858320 -84458445 - MLT1F LTR MaLR -251 291 1 1142 260 63 63 chr10 55858323 55859146 -84457619 + L1MDa LINE L1 1080 1902 -4638 422 188 34 60 chr10 55859161 55859178 -84457587 + L1MA8 LINE L1 6038 6054 -237 2100 126 13 51 chr10 55859178 55859553 -84457212 - THE1C LTR MaLR 0 375 14 1893 133 3 38 chr10 55859553 55859870 -84456895 + AluSq SINE Alu 1 306 -7 2100 126 13 51 chr10 55859870 55859884 -84456881 - THE1C LTR MaLR -361 14 1 422 188 34 60 chr10 55859884 55859983 -84456782 + L1MA8 LINE L1 6054 6151 -140 2080 206 48 122 chr10 55859993 55860407 -84456358 + L1MD2 LINE L1 5581 5915 -444 1280 96 86 41 chr10 55860407 55860627 -84456138 - MER30 DNA MER1_type 0 230 1 2080 206 48 122 chr10 55860627 55860969 -84455796 + L1MD2 LINE L1 5915 6281 -78 208 262 127 56 chr10 55861065 55861191 -84455574 + L2 LINE L2 3134 3268 -4 1666 288 96 28 chr10 55862171 55863176 -84453589 - L1ME3A LINE L1 -51 6119 5042 2569 180 69 99 chr10 55863238 55863726 -84453039 - L1MA8 LINE L1 -5 6286 5755 225 243 0 40 chr10 55863726 55863800 -84452965 + LTR66 LTR ERVL 394 464 -146 2569 180 69 99 chr10 55863800 55864049 -84452716 - L1MA8 LINE L1 -536 5755 5500 1463 213 3 20 chr10 55864276 55864577 -84452188 - AluJo SINE Alu -10 302 7 24 0 0 0 chr10 55864584 55864608 -84452157 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 55864835 55864861 -84451904 + AT_rich Low_complexity Low_complexity 1 26 0 309 343 63 24 chr10 55865842 55866049 -84450716 - MIR SINE MIR -13 249 35 459 347 36 14 chr10 55866613 55866832 -84449933 + MIR SINE MIR 15 238 -24 203 240 0 40 chr10 55867147 55867272 -84449493 + CT-rich Low_complexity Low_complexity 1 120 0 235 277 24 48 chr10 55867610 55867693 -84449072 - MER5A DNA MER1_type -28 161 81 2559 251 56 39 chr10 55867777 55868704 -84448061 + L1MD2 LINE L1 5179 6132 -227 35 24 0 0 chr10 55868715 55868757 -84448008 + AT_rich Low_complexity Low_complexity 1 42 0 360 335 58 19 chr10 55870086 55870115 -84446650 + MIR SINE MIR 49 75 -187 8856 116 9 1 chr10 55870115 55871387 -84445378 - HSMAR1 DNA Mariner -1 1286 5 360 335 58 19 chr10 55871387 55871563 -84445202 + MIR SINE MIR 75 262 0 279 133 0 0 chr10 55872380 55872425 -84444340 + (GGAGAA)n Simple_repeat Simple_repeat 6 50 0 558 150 25 8 chr10 55872452 55872572 -84444193 + T-rich Low_complexity Low_complexity 3 124 0 238 323 6 30 chr10 55872913 55873077 -84443688 + CT-rich Low_complexity Low_complexity 3 162 0 258 238 0 16 chr10 55873501 55873564 -84443201 - L1ME3 LINE L1 -79 6083 6022 807 237 31 72 chr10 55873571 55873665 -84443100 - MER63 DNA MER1_type -19 1043 947 2368 56 0 30 chr10 55873665 55873967 -84442798 + AluY SINE Alu 1 293 -18 807 237 31 72 chr10 55873967 55874193 -84442572 - MER63 DNA MER1_type -115 947 736 572 204 194 0 chr10 55874350 55874556 -84442209 - MER63 DNA MER1_type -684 246 1 892 225 78 62 chr10 55874556 55874876 -84441889 - L1ME2 LINE L1 -145 6019 5695 1749 199 29 9 chr10 55875076 55875417 -84441348 + MER7A DNA MER2_type 1 346 0 324 0 0 0 chr10 55875927 55875963 -84440802 + (TG)n Simple_repeat Simple_repeat 1 36 0 31 26 0 0 chr10 55876238 55876276 -84440489 + AT_rich Low_complexity Low_complexity 1 38 0 335 262 33 49 chr10 55876486 55876608 -84440157 + MER94 DNA DNA 11 130 -4 323 287 52 37 chr10 55877626 55877762 -84439003 + MIR SINE MIR 70 207 -55 1505 151 25 4 chr10 55879112 55879391 -84437374 - L1MA6 LINE L1 -11 6289 6005 555 304 145 0 chr10 55879660 55879874 -84436891 - MIR SINE MIR 0 262 18 721 211 0 0 chr10 55881068 55881201 -84435564 + FLAM_A SINE Alu 1 133 0 698 325 82 27 chr10 55881292 55882528 -84434237 + L1M4 LINE L1 2340 3643 -2503 1533 195 41 139 chr10 55883448 55884126 -84432639 - LTR9 LTR ERV1 0 612 1 2361 76 10 0 chr10 55885048 55885352 -84431413 + AluSc SINE Alu 3 309 0 351 143 0 60 chr10 55885608 55885692 -84431073 - AluS SINE Alu -223 79 1 210 222 0 0 chr10 55886362 55886407 -84430358 + GA-rich Low_complexity Low_complexity 2 46 0 205 246 82 16 chr10 55887006 55887067 -84429698 + L3 LINE CR1 1420 1484 -93 2143 124 28 25 chr10 55887258 55887620 -84429145 + THE1B LTR MaLR 1 363 -1 21 36 0 0 chr10 55888206 55888234 -84428531 + AT_rich Low_complexity Low_complexity 1 28 0 298 302 85 16 chr10 55888511 55888640 -84428125 + MIR SINE MIR 122 259 -3 318 237 0 65 chr10 55888990 55889083 -84427682 + L1MC4 LINE L1 6617 6703 -1339 68 82 0 0 chr10 55889173 55889332 -84427433 + AT_rich Low_complexity Low_complexity 1 159 0 728 161 0 0 chr10 55889332 55889450 -84427315 - FLAM_C SINE Alu -25 118 1 365 279 84 26 chr10 55889849 55890003 -84426762 + MIR SINE MIR 43 205 -57 213 39 0 0 chr10 55890053 55890079 -84426686 + (TAA)n Simple_repeat Simple_repeat 3 28 0 521 286 139 17 chr10 55890080 55890318 -84426447 - LTR50 LTR ERVL -169 626 360 1559 141 95 46 chr10 55890387 55890734 -84426031 - THE1C LTR MaLR -11 364 1 425 208 139 14 chr10 55890797 55890941 -84425824 - LTR50 LTR ERVL -629 166 5 1433 177 174 10 chr10 55891853 55892164 -84424601 - MSTA LTR MaLR -66 362 1 9046 148 9 29 chr10 55892164 55893774 -84422991 - MSTA-int LTR MaLR 0 1580 3 1401 168 52 142 chr10 55893782 55894012 -84422753 - MSTA LTR MaLR -10 418 248 2003 83 40 30 chr10 55894012 55894312 -84422453 + AluY SINE Alu 1 303 -8 1401 168 52 142 chr10 55894312 55894540 -84422225 - MSTA LTR MaLR -180 248 1 2093 103 0 48 chr10 55897122 55897433 -84419332 - AluSg1 SINE Alu -13 296 1 2340 83 13 0 chr10 55897580 55897881 -84418884 - AluSp SINE Alu -8 305 1 485 292 100 53 chr10 55897882 55898163 -84418602 + L2 LINE L2 1769 2062 -1252 25 0 0 0 chr10 55898172 55898197 -84418568 + AT_rich Low_complexity Low_complexity 1 25 0 2047 194 37 5 chr10 55898325 55898733 -84418032 - LOR1b LTR ERV1 0 461 41 1162 188 111 19 chr10 55898908 55899169 -84417596 - MER50 LTR ERV1 -38 696 412 14061 62 2 1 chr10 55899460 55901256 -84415509 - L1P LINE L1 -4337 1809 12 7412 31 8 0 chr10 55901258 55902551 -84414214 + L1PA4 LINE L1 4856 6155 0 357 82 0 0 chr10 55904233 55904282 -84412483 + (CA)n Simple_repeat Simple_repeat 1 49 0 30 27 0 0 chr10 55905042 55905079 -84411686 + AT_rich Low_complexity Low_complexity 1 37 0 185 0 40 0 chr10 55905553 55905578 -84411187 + (TTG)n Simple_repeat Simple_repeat 2 27 0 269 224 17 0 chr10 55905688 55905746 -84411019 + MLT1I LTR MaLR 344 402 -7 2634 203 53 58 chr10 55905788 55906508 -84410257 + L1MD2 LINE L1 5618 6333 -26 2399 82 0 0 chr10 55906669 55906972 -84409793 + AluSg SINE Alu 1 303 -7 23 42 0 21 chr10 55907036 55907061 -84409704 + AT_rich Low_complexity Low_complexity 1 26 -21 1479 195 0 33 chr10 55907061 55907363 -84409402 + AluJo SINE Alu 5 296 -16 23 42 0 21 chr10 55907363 55907385 -84409380 + AT_rich Low_complexity Low_complexity 26 47 0 439 273 120 55 chr10 55908002 55908647 -84408118 - L1M4 LINE L1 -895 5251 4555 1571 163 51 0 chr10 55908647 55908923 -84407842 + AluSx SINE Alu 1 290 -22 439 273 120 55 chr10 55908923 55908978 -84407787 - L1M4 LINE L1 -1591 4555 4505 225 178 0 0 chr10 55909271 55909316 -84407449 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1316 184 98 0 chr10 55909590 55909867 -84406898 - AluJb SINE Alu -8 304 1 300 297 75 49 chr10 55910059 55910406 -84406359 + L1MC4a LINE L1 5542 5897 -224 219 36 0 0 chr10 55912864 55912892 -84403873 + (TG)n Simple_repeat Simple_repeat 2 29 0 188 422 9 9 chr10 55912912 55913021 -84403744 - MER5A DNA MER1_type -27 162 54 25 31 0 0 chr10 55913440 55913472 -84403293 + AT_rich Low_complexity Low_complexity 1 32 0 1470 174 42 45 chr10 55914597 55914908 -84401857 - AluJb SINE Alu -2 310 1 1759 159 0 11 chr10 55915742 55916018 -84400747 + AluJb SINE Alu 1 273 -39 1919 78 0 4 chr10 55916365 55916608 -84400157 - AluSc SINE Alu -65 244 3 248 284 94 8 chr10 55916664 55916791 -84399974 + L1MD1 LINE L1 6091 6228 -14 2798 179 30 7 chr10 55917324 55918223 -84398542 - L1MA3 LINE L1 -620 5685 4767 2739 159 65 51 chr10 55918216 55918821 -84397944 + L1MA3 LINE L1 5693 6305 0 * 21 57 0 0 chr10 55918857 55918892 -84397873 + AT_rich Low_complexity Low_complexity 1 35 0 2553 39 0 10 chr10 55919095 55919404 -84397361 + AluY SINE Alu 1 306 -5 234 341 44 0 chr10 55920017 55920108 -84396657 + MIR3 SINE MIR 66 160 -48 30 69 0 0 chr10 55920640 55920698 -84396067 + AT_rich Low_complexity Low_complexity 1 58 0 2255 97 0 0 chr10 55921609 55921907 -84394858 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 55922365 55922386 -84394379 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 55922648 55922670 -84394095 + AT_rich Low_complexity Low_complexity 1 22 0 1302 156 130 33 chr10 55922852 55923122 -84393643 + AluJb SINE Alu 1 296 -16 32 67 0 0 chr10 55923146 55923206 -84393559 + AT_rich Low_complexity Low_complexity 1 60 0 1225 309 50 36 chr10 55924488 55925073 -84391692 - MLT1E LTR MaLR 0 593 1 21 71 0 0 chr10 55925697 55925739 -84391026 + AT_rich Low_complexity Low_complexity 1 42 0 201 371 19 9 chr10 55925828 55925933 -84390832 + L2 LINE L2 2654 2759 -555 370 306 0 9 chr10 55926253 55926364 -84390401 + LTR67 LTR ERVL 438 547 -10 181 283 9 66 chr10 55927437 55927543 -84389222 - MIR SINE MIR -4 258 159 862 181 13 0 chr10 55928210 55928433 -84388332 + ALR/Alpha Satellite centromeric 1 225 -13 1016 174 12 0 chr10 55928446 55929108 -84387657 + ALR/Alpha Satellite centromeric 1 669 -13 1126 166 8 0 chr10 55929121 55931143 -84385622 + ALR/Alpha Satellite centromeric 1 2037 -13 1114 151 5 0 chr10 55931156 55931705 -84385060 + ALR/Alpha Satellite centromeric 1 551 -48 3043 174 14 10 chr10 55932010 55932590 -84384175 - L1MC1 LINE L1 -96 6237 5656 352 143 0 0 chr10 55933028 55933084 -84383681 - AluS SINE Alu -201 102 47 550 312 69 16 chr10 55933414 55933661 -84383104 + LTR16C LTR ERVL 232 491 0 21 0 0 0 chr10 55933688 55933709 -84383056 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr10 55933895 55933917 -84382848 + (T)n Simple_repeat Simple_repeat 1 22 0 2292 59 0 0 chr10 55933996 55934286 -84382479 - AluY SINE Alu -10 301 12 300 353 58 43 chr10 55935245 55935503 -84381262 - MIR SINE MIR 0 262 1 206 231 0 0 chr10 55936261 55936300 -84380465 + L2 LINE L2 2502 2540 -774 187 250 0 0 chr10 55936304 55936340 -84380425 + L2 LINE L2 2500 2535 -779 * 275 336 45 30 chr10 55936317 55936451 -84380314 + L2 LINE L2 2946 3081 -232 244 62 0 0 chr10 55936460 55936492 -84380273 - MSTB1 LTR MaLR -1 431 400 * 1410 158 62 8 chr10 55936488 55936748 -84380017 - MSTB1 LTR MaLR -158 274 1 1640 169 90 3 chr10 55936906 55937238 -84379527 + MER46B DNA MER2_type 1 236 0 419 241 177 7 chr10 55937435 55937576 -84379189 + L2 LINE L2 3140 3304 -9 317 361 16 0 chr10 55939111 55939233 -84377532 + L2 LINE L2 3190 3313 0 6346 231 48 28 chr10 55939286 55941372 -84375393 + L1M2 LINE L1 2156 4430 -1716 * 14167 218 32 6 chr10 55941371 55944484 -84372281 - L1P LINE L1 -1435 4711 1516 616 182 0 0 chr10 55944479 55944589 -84372176 + L1M2 LINE L1 4913 5022 -1124 * 2400 150 44 28 chr10 55944587 55945207 -84371558 + L1PA13 LINE L1 5060 5688 -475 1070 147 0 0 chr10 55945208 55945364 -84371401 + AluSg/x SINE Alu 142 297 -13 2948 108 32 2 chr10 55945372 55945837 -84370928 + L1PA13 LINE L1 5680 6158 -5 4247 197 31 15 chr10 55945871 55946807 -84369958 + L1M2 LINE L1 4439 5409 -891 928 70 78 0 chr10 55946807 55946935 -84369830 - MER85 DNA T2_type -1 138 1 4247 197 31 15 chr10 55946935 55947240 -84369525 + L1M2 LINE L1 5409 5708 -592 847 137 7 7 chr10 55947230 55947369 -84369396 + L1M2 LINE L1 5554 5692 -608 * 1342 260 33 38 chr10 55947369 55947761 -84369004 + MER68 LTR ERV1 166 555 -7 22 80 0 0 chr10 55947970 55948020 -84368745 + AT_rich Low_complexity Low_complexity 1 50 0 603 211 8 15 chr10 55948203 55948336 -84368429 - FLAM_C SINE Alu 0 133 2 25 31 0 0 chr10 55950738 55950770 -84365995 + AT_rich Low_complexity Low_complexity 1 32 0 511 348 35 48 chr10 55951761 55952359 -84364406 + L1MEc LINE L1 278 867 -5696 334 321 56 5 chr10 55952419 55952634 -84364131 + L1MEc LINE L1 1297 1670 -4893 1494 330 70 27 chr10 55952690 55953365 -84363400 + L1M4b LINE L1 70 773 -6086 295 259 80 9 chr10 55953498 55953610 -84363155 + L1M4b LINE L1 811 930 -5929 192 77 0 0 chr10 55953978 55954004 -84362761 + (A)n Simple_repeat Simple_repeat 1 26 0 1650 287 79 19 chr10 55954227 55955037 -84361728 + L1M4b LINE L1 1193 2124 -4835 1463 208 49 0 chr10 55955037 55955325 -84361440 + AluJb SINE Alu 5 306 -6 1650 287 79 19 chr10 55955325 55955629 -84361136 + L1M4b LINE L1 2124 2408 -4551 712 274 34 26 chr10 55955764 55955998 -84360767 - L1M4 LINE L1 -3387 2995 2760 437 284 140 15 chr10 55956003 55956501 -84360264 - L1M4 LINE L1 -3772 2610 2059 2328 224 52 19 chr10 55956575 55957952 -84358813 + L1MB8 LINE L1 4684 6169 -9 28 48 0 0 chr10 55958208 55958250 -84358515 + AT_rich Low_complexity Low_complexity 1 42 0 453 294 64 17 chr10 55958259 55958494 -84358271 + L1MC4 LINE L1 6458 6703 -1339 21 0 0 0 chr10 55958823 55958844 -84357921 + AT_rich Low_complexity Low_complexity 1 21 0 1555 195 17 17 chr10 55958897 55959189 -84357576 - AluJo SINE Alu -20 292 1 28 48 0 0 chr10 55959342 55959384 -84357381 + AT_rich Low_complexity Low_complexity 1 42 0 231 315 0 0 chr10 55960487 55960541 -84356224 + MLT1E1 LTR MaLR 1 54 -570 544 294 42 53 chr10 55960618 55960950 -84355815 + MLT1E1 LTR MaLR 209 499 -94 27 49 0 0 chr10 55961485 55961526 -84355239 + AT_rich Low_complexity Low_complexity 1 41 0 2291 78 13 26 chr10 55962968 55963274 -84353491 + AluY SINE Alu 1 302 -9 233 238 12 0 chr10 55963390 55963470 -84353295 + (TA)n Simple_repeat Simple_repeat 1 81 0 219 241 165 45 chr10 55963553 55963686 -84353079 + MIR SINE MIR 4 152 -110 295 221 125 125 chr10 55964349 55964557 -84352208 + MER57A LTR ERV1 1 208 -195 200 242 63 95 chr10 55967242 55967337 -84349428 - L2 LINE L2 -1 3271 3180 23 68 0 0 chr10 55968344 55968388 -84348377 + AT_rich Low_complexity Low_complexity 1 44 0 270 144 52 31 chr10 55968660 55968757 -84348008 + (TTA)n Simple_repeat Simple_repeat 3 101 0 2066 275 78 23 chr10 55968898 55969843 -84346922 - L1MEc LINE L1 -5236 1160 45 240 282 78 10 chr10 55969863 55969966 -84346799 - L1MC5 LINE L1 -575 7386 7277 1069 216 4 50 chr10 55971837 55972096 -84344669 + AluJb SINE Alu 1 247 -65 29 0 0 0 chr10 55972277 55972306 -84344459 + AT_rich Low_complexity Low_complexity 1 29 0 1405 27 0 22 chr10 55972306 55972353 -84344412 + (GAAA)n Simple_repeat Simple_repeat 1 225 0 1405 27 0 22 chr10 55972353 55972537 -84344228 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 332 212 0 0 chr10 55973096 55973162 -84343603 + L1MC4 LINE L1 6638 6703 -1339 243 170 0 0 chr10 55973162 55973209 -84343556 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 186 156 0 0 chr10 55973375 55973420 -84343345 + A-rich Low_complexity Low_complexity 1 45 0 763 187 18 41 chr10 55973579 55973750 -84343015 - MLT2D LTR ERVL -29 385 219 329 262 262 7 chr10 55973904 55974045 -84342720 + MER5B DNA MER1_type 1 177 -1 228 323 76 32 chr10 55974458 55974616 -84342149 - L2 LINE L2 -5 3308 3144 401 300 112 12 chr10 55974889 55975059 -84341706 - MIR SINE MIR 0 262 76 180 0 0 0 chr10 55975846 55975866 -84340899 + (T)n Simple_repeat Simple_repeat 1 20 0 2253 90 0 6 chr10 55976156 55976467 -84340298 + AluY SINE Alu 1 309 -2 183 129 0 0 chr10 55977848 55977879 -84338886 + (TATG)n Simple_repeat Simple_repeat 2 32 0 303 189 0 0 chr10 55977994 55978047 -84338718 + MLT1C LTR MaLR 413 465 -2 26 30 0 0 chr10 55978247 55978280 -84338485 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr10 55978608 55978641 -84338124 + AT_rich Low_complexity Low_complexity 1 33 0 275 364 0 38 chr10 55979282 55979414 -84337351 + MIR3 SINE MIR 13 139 -69 264 189 46 65 chr10 55979947 55980100 -84336665 + (TTAAA)n Simple_repeat Simple_repeat 2 151 0 25 51 0 0 chr10 55980123 55980162 -84336603 + AT_rich Low_complexity Low_complexity 1 39 0 1247 176 109 3 chr10 55980299 55980583 -84336182 + L1MC1 LINE L1 5345 5658 -675 * 1984 176 68 39 chr10 55980576 55981018 -84335747 + L1MC1 LINE L1 5879 6333 0 327 316 35 30 chr10 55981120 55981269 -84335496 + MIR3 SINE MIR 7 156 -52 261 0 0 0 chr10 55981733 55981762 -84335003 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 255 364 160 35 chr10 55982318 55982549 -84334216 - L2 LINE L2 -1 3271 3012 215 378 68 30 chr10 55982596 55982892 -84333873 - L2 LINE L2 -449 2865 2559 22 99 0 0 chr10 55983646 55983717 -84333048 + AT_rich Low_complexity Low_complexity 1 71 0 223 344 42 10 chr10 55983812 55983908 -84332857 + MIR SINE MIR 163 261 -1 414 151 0 0 chr10 55983996 55984069 -84332696 + (CA)n Simple_repeat Simple_repeat 2 74 0 434 78 0 89 chr10 55984200 55984290 -84332475 - AluSp/q SINE Alu 0 313 232 27 49 0 0 chr10 55984737 55984778 -84331987 + AT_rich Low_complexity Low_complexity 1 41 0 264 100 0 0 chr10 55985603 55985643 -84331122 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 404 320 95 7 chr10 55986515 55986704 -84330061 - MIR3 SINE MIR -1 207 1 259 83 21 21 chr10 55987483 55987531 -84329234 + (TA)n Simple_repeat Simple_repeat 1 48 0 1221 189 85 12 chr10 55987542 55987696 -84329069 - AluJo SINE Alu -28 284 102 180 97 0 0 chr10 55987696 55987727 -84329038 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1221 189 85 12 chr10 55987727 55987831 -84328934 - AluJo SINE Alu -210 102 7 21 36 0 0 chr10 55990121 55990149 -84326616 + AT_rich Low_complexity Low_complexity 1 28 0 24 85 0 0 chr10 55990285 55990344 -84326421 + AT_rich Low_complexity Low_complexity 1 59 0 374 327 42 12 chr10 55990631 55990799 -84325966 + Charlie1 DNA MER1_type 9 181 -2580 * 2030 219 95 15 chr10 55990791 55991028 -84325737 + Charlie1 DNA MER1_type 2056 2273 -488 3393 171 46 3 chr10 55991028 55991627 -84325138 - MER39B LTR ERV1 0 653 81 201 39 0 0 chr10 55991627 55991653 -84325112 + (TAGA)n Simple_repeat Simple_repeat 4 29 0 2102 103 38 0 chr10 55991653 55991943 -84324822 - AluSx SINE Alu -11 301 1 3393 171 46 3 chr10 55991943 55991968 -84324797 - MER39B LTR ERV1 -571 82 1 2030 219 95 15 chr10 55991968 55992382 -84324383 + Charlie1 DNA MER1_type 2273 2759 -2 1902 171 33 28 chr10 55992749 55993111 -84323654 + THE1B LTR MaLR 1 364 0 2742 197 23 41 chr10 55994256 55994495 -84322270 + L1MD1 LINE L1 5587 5829 -413 1993 190 83 33 chr10 55994495 55995012 -84321753 + MER67A LTR ERV1 1 543 0 2742 197 23 41 chr10 55995012 55995037 -84321728 + L1MD1 LINE L1 5829 5853 -389 3791 87 30 23 chr10 55995037 55995476 -84321289 + LTR19B LTR ERV1 3 448 -132 2100 120 3 7 chr10 55995476 55995785 -84320980 + AluSg SINE Alu 1 308 -2 3791 87 30 23 chr10 55995785 55995919 -84320846 + LTR19B LTR ERV1 448 580 0 2742 197 23 41 chr10 55995919 55996307 -84320458 + L1MD1 LINE L1 5853 6228 -14 201 232 98 24 chr10 55996557 55996639 -84320126 + MIR SINE MIR 74 161 -101 303 234 11 64 chr10 55996699 55996793 -84319972 - L1MC4 LINE L1 -1339 6703 6615 543 211 35 0 chr10 55996848 55997019 -84319746 + (TA)n Simple_repeat Simple_repeat 2 178 0 269 169 0 31 chr10 55997155 55997220 -84319545 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 2110 149 120 44 chr10 55997467 55997942 -84318823 - L1MA9 LINE L1 -3 6545 6035 477 204 0 11 chr10 55997954 55998042 -84318723 - MER47A DNA MER2_type 0 366 280 360 219 49 24 chr10 55998053 55998135 -84318630 + MER47A DNA MER2_type 1 84 -282 249 250 0 0 chr10 55998168 55998224 -84318541 - MER47A DNA MER2_type -13 353 298 1901 209 32 10 chr10 55998228 55998374 -84318391 - L1MA9 LINE L1 -515 6033 5892 990 220 99 41 chr10 55998374 55998719 -84318046 - MER47A DNA MER2_type -1 365 1 1901 209 32 10 chr10 55998719 55998978 -84317787 - L1MA9 LINE L1 -656 5892 5619 1662 259 34 16 chr10 55998986 55999724 -84317041 - L1MA9 LINE L1 -3506 2876 2121 524 212 85 6 chr10 56000371 56000622 -84316143 + MER33 DNA MER1_type 9 354 -9 209 316 96 45 chr10 56000640 56000817 -84315948 + L2 LINE L2 3119 3304 -9 1823 194 97 21 chr10 56003185 56003619 -84313146 - MLT1C LTR MaLR 0 467 1 27 49 0 0 chr10 56003821 56003862 -84312903 + AT_rich Low_complexity Low_complexity 1 41 0 1341 206 64 18 chr10 56004051 56004220 -84312545 - AluJo SINE Alu -15 297 137 213 65 0 0 chr10 56004220 56004251 -84312514 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7341 37 0 0 chr10 56004251 56005416 -84311349 - L1PA4 LINE L1 -11 6144 4979 1341 206 64 18 chr10 56005416 56005527 -84311238 - AluJo SINE Alu -174 138 3 204 135 0 0 chr10 56005703 56005740 -84311025 + (TA)n Simple_repeat Simple_repeat 2 38 0 238 65 22 0 chr10 56005746 56005792 -84310973 + LTR66 LTR ERVL 389 435 -175 364 196 58 58 chr10 56006308 56006446 -84310319 + LTR52 LTR ERVL 239 376 -45 22 70 0 0 chr10 56006762 56006805 -84309960 + AT_rich Low_complexity Low_complexity 1 43 0 410 307 0 0 chr10 56006906 56007020 -84309745 - MER63A DNA MER1_type -44 166 53 207 0 0 0 chr10 56007023 56007046 -84309719 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 366 119 10 chr10 56007414 56007515 -84309250 + MER5B DNA MER1_type 2 113 -65 23 68 0 0 chr10 56008102 56008146 -84308619 + AT_rich Low_complexity Low_complexity 1 44 0 211 292 34 11 chr10 56008230 56008319 -84308446 - MIR SINE MIR -121 141 51 406 281 79 0 chr10 56008435 56008549 -84308216 - L2 LINE L2 -1 3271 3149 5800 184 24 9 chr10 56009083 56011185 -84305580 + L1PA16 LINE L1 3981 6147 -19 609 267 32 24 chr10 56011186 56011437 -84305328 - LTR37B LTR ERV1 -5 463 211 783 251 14 0 chr10 56011585 56011808 -84304957 - LTR37B LTR ERV1 -242 226 1 23 33 0 0 chr10 56011979 56012009 -84304756 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 56012971 56013004 -84303761 + AT_rich Low_complexity Low_complexity 1 33 0 276 53 0 0 chr10 56013413 56013451 -84303314 + (TATG)n Simple_repeat Simple_repeat 3 40 0 2150 105 3 0 chr10 56013451 56013746 -84303019 - AluSg SINE Alu -14 296 1 935 127 0 6 chr10 56014489 56014654 -84302111 + (TTCC)n Simple_repeat Simple_repeat 2 165 0 228 111 0 0 chr10 56014880 56014916 -84301849 + (CAT)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr10 56014974 56015008 -84301757 + AT_rich Low_complexity Low_complexity 1 34 0 604 343 33 4 chr10 56015378 56015620 -84301145 - MIR SINE MIR -10 252 4 23 0 0 0 chr10 56017091 56017114 -84299651 + AT_rich Low_complexity Low_complexity 1 23 0 317 187 39 32 chr10 56017675 56017830 -84298935 + (TATATG)n Simple_repeat Simple_repeat 1 156 0 203 212 10 30 chr10 56017897 56017996 -84298769 + (TA)n Simple_repeat Simple_repeat 2 98 0 353 282 0 6 chr10 56018051 56018232 -84298533 + (TA)n Simple_repeat Simple_repeat 1 180 0 198 322 0 0 chr10 56018266 56018440 -84298325 + (CATA)n Simple_repeat Simple_repeat 3 176 0 328 333 0 0 chr10 56018440 56018545 -84298220 + (TATG)n Simple_repeat Simple_repeat 2 106 0 297 298 0 0 chr10 56018546 56018724 -84298041 + (TA)n Simple_repeat Simple_repeat 1 178 0 379 128 13 13 chr10 56019533 56019611 -84297154 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 209 0 0 chr10 56020173 56020216 -84296549 + (CA)n Simple_repeat Simple_repeat 1 43 0 2000 125 0 26 chr10 56020674 56020978 -84295787 - AluSx SINE Alu -16 296 1 1096 82 0 0 chr10 56020978 56021113 -84295652 - AluSq/x SINE Alu -178 135 1 22 0 0 0 chr10 56021535 56021557 -84295208 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr10 56021844 56021877 -84294888 + AT_rich Low_complexity Low_complexity 1 33 0 850 291 39 34 chr10 56022205 56022590 -84294175 - LTR16B LTR ERVL -11 453 67 184 360 89 61 chr10 56022660 56022907 -84293858 - L2 LINE L2 -87 3185 2932 667 303 31 42 chr10 56023005 56023266 -84293499 + MLT1H1 LTR MaLR 9 266 -289 192 40 0 0 chr10 56023289 56023314 -84293451 + (TG)n Simple_repeat Simple_repeat 1 25 0 372 59 0 0 chr10 56023314 56023365 -84293400 + (GA)n Simple_repeat Simple_repeat 2 52 0 468 296 80 12 chr10 56023506 56023597 -84293168 + MLT1H1 LTR MaLR 411 494 -96 399 21 0 0 chr10 56023597 56023645 -84293120 + (CA)n Simple_repeat Simple_repeat 1 48 0 468 296 80 12 chr10 56023645 56023715 -84293050 + MLT1H1 LTR MaLR 494 583 -7 395 322 89 44 chr10 56026791 56027151 -84289614 + L1ME4a LINE L1 5688 6063 -58 21 0 0 0 chr10 56027876 56027897 -84288868 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 56028440 56028468 -84288297 + AT_rich Low_complexity Low_complexity 1 28 0 447 371 20 16 chr10 56028946 56029199 -84287566 + MIR SINE MIR 3 256 -6 1640 187 80 15 chr10 56029746 56029885 -84286880 - L1MC3 LINE L1 -28 7757 7628 843 280 4 13 chr10 56029885 56030124 -84286641 - MER8 DNA MER2_type 0 239 3 1640 187 80 15 chr10 56030124 56030386 -84286379 - L1MC3 LINE L1 -157 7628 7330 193 262 79 98 chr10 56030554 56030718 -84286047 - MIR SINE MIR -42 220 60 269 326 26 72 chr10 56031669 56032034 -84284731 - L1ME LINE L1 -388 5774 5440 1610 155 33 33 chr10 56032034 56032338 -84284427 + AluSx SINE Alu 1 304 -8 269 326 26 72 chr10 56032338 56032511 -84284254 - L1ME LINE L1 -722 5440 5261 993 343 61 46 chr10 56032857 56033984 -84282781 + HERVL LTR ERVL 3364 4507 -1147 23 0 0 0 chr10 56034037 56034060 -84282705 + AT_rich Low_complexity Low_complexity 1 23 0 371 259 129 26 chr10 56034357 56034550 -84282215 - L1ME3A LINE L1 -8 6162 5950 21 0 0 0 chr10 56034728 56034749 -84282016 + AT_rich Low_complexity Low_complexity 1 21 0 271 286 46 22 chr10 56035907 56036021 -84280744 - MER5B DNA MER1_type -1 177 72 452 231 22 37 chr10 56089737 56089871 -84226894 - MER3 DNA MER1_type -1 208 77 664 242 0 13 chr10 56090643 56090796 -84225969 + MLT2B3 LTR ERVL 384 534 -20 246 222 0 0 chr10 56090833 56090896 -84225869 + L1MC4 LINE L1 6641 6703 -1339 1660 120 8 107 chr10 56091156 56091530 -84225235 + MER1B DNA MER1_type 1 337 0 263 88 45 0 chr10 56091744 56091835 -84224930 + (TA)n Simple_repeat Simple_repeat 1 95 0 308 227 41 31 chr10 56091835 56091932 -84224833 - L1MC4 LINE L1 -1333 6709 6612 754 148 33 0 chr10 56091943 56092065 -84224700 - FLAM_C SINE Alu -17 126 1 2123 113 3 3 chr10 56094736 56095029 -84221736 - AluSp SINE Alu -20 293 1 1459 181 49 7 chr10 56095149 56095437 -84221328 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr10 56095984 56096011 -84220754 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 56096064 56096086 -84220679 + AT_rich Low_complexity Low_complexity 1 22 0 1995 136 16 30 chr10 56096534 56096901 -84219864 - THE1C LTR MaLR -12 363 2 24 67 0 0 chr10 56097089 56097134 -84219631 + AT_rich Low_complexity Low_complexity 1 45 0 185 361 42 0 chr10 56098746 56098818 -84217947 + MER5A DNA MER1_type 8 82 -107 222 37 0 0 chr10 56099451 56099478 -84217287 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 234 0 0 0 chr10 56099477 56099503 -84217262 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 268 159 0 29 chr10 56100259 56100328 -84216437 + GA-rich Low_complexity Low_complexity 1 67 0 202 219 16 16 chr10 56100341 56100405 -84216360 + GA-rich Low_complexity Low_complexity 1 64 0 324 0 0 0 chr10 56102762 56102798 -84213967 + (TG)n Simple_repeat Simple_repeat 2 37 0 463 143 0 10 chr10 56103044 56103142 -84213623 + L1MA7 LINE L1 6192 6288 -3 25 0 0 0 chr10 56105333 56105358 -84211407 + AT_rich Low_complexity Low_complexity 1 25 0 180 152 0 0 chr10 56105514 56105547 -84211218 + (TA)n Simple_repeat Simple_repeat 1 33 0 343 340 46 7 chr10 56106271 56106424 -84210341 - MIR SINE MIR -4 258 100 1340 220 86 49 chr10 56106492 56106979 -84209786 + MLT1D LTR MaLR 1 505 0 1951 129 0 36 chr10 56107356 56107659 -84209106 + AluSx SINE Alu 1 292 -20 1363 224 13 19 chr10 56107996 56108304 -84208461 - AluJb SINE Alu -6 306 1 982 301 60 27 chr10 56109041 56109618 -84207147 + L1ME3A LINE L1 5414 6007 -163 24 53 0 0 chr10 56110101 56110139 -84206626 + AT_rich Low_complexity Low_complexity 1 38 0 330 219 62 0 chr10 56110366 56110462 -84206303 - L1MD1 LINE L1 -6 6236 6135 264 242 0 0 chr10 56110468 56110534 -84206231 - L1MD1 LINE L1 -143 6099 6034 * 1796 278 103 24 chr10 56110532 56111613 -84205152 - L1M4 LINE L1 -2050 4096 2856 3389 125 2 6 chr10 56111613 56112126 -84204639 + MER9 LTR ERVK 1 511 0 1796 278 103 24 chr10 56112126 56112312 -84204453 - L1M4 LINE L1 -3290 2856 2686 224 211 0 102 chr10 56112460 56112588 -84204177 + CT-rich Low_complexity Low_complexity 2 116 0 23 54 0 0 chr10 56113046 56113083 -84203682 + AT_rich Low_complexity Low_complexity 1 37 0 286 247 0 49 chr10 56113323 56113404 -84203361 - L2 LINE L2 -1 3312 3236 324 360 99 50 chr10 56113799 56114385 -84202380 - L2 LINE L2 -453 2861 2247 24 32 0 0 chr10 56114677 56114708 -84202057 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 56115104 56115141 -84201624 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 56115230 56115253 -84201512 + AT_rich Low_complexity Low_complexity 1 23 0 232 299 81 59 chr10 56116047 56116368 -84200397 + HAL1b LINE L1 279 606 -742 211 143 71 0 chr10 56116802 56116844 -84199921 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 458 312 89 32 chr10 56117020 56117494 -84199271 + L1M4 LINE L1 2314 2814 -3332 1474 236 32 47 chr10 56118502 56118969 -84197796 - MLT1C LTR MaLR -7 460 1 198 0 0 0 chr10 56119305 56119327 -84197438 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1925 128 0 7 chr10 56119327 56119609 -84197156 - AluSx SINE Alu -32 280 1 5193 159 14 29 chr10 56120172 56121190 -84195575 + L1MA7 LINE L1 5284 6286 -5 717 63 0 0 chr10 56121888 56121983 -84194782 - AluY SINE Alu -6 305 211 2035 82 0 21 chr10 56122720 56123001 -84193764 + AluY SINE Alu 25 299 -12 926 211 10 102 chr10 56124477 56124780 -84191985 + AluJo SINE Alu 23 297 -15 249 369 8 8 chr10 56124919 56125041 -84191724 - Charlie8 DNA MER1_type -2181 236 115 334 219 0 0 chr10 56125677 56125741 -84191024 + MLT2B1 LTR ERVL 1 64 -456 254 269 7 40 chr10 56125742 56125891 -84190874 + (TATAA)n Simple_repeat Simple_repeat 3 146 0 305 331 166 0 chr10 56127468 56127619 -84189146 - MIR SINE MIR -28 234 59 394 348 100 9 chr10 56128310 56128540 -84188225 + MIR SINE MIR 12 262 0 24 0 0 0 chr10 56128753 56128777 -84187988 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 56129629 56129662 -84187103 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 56129683 56129713 -84187052 + AT_rich Low_complexity Low_complexity 1 30 0 29 0 0 0 chr10 56129766 56129795 -84186970 + AT_rich Low_complexity Low_complexity 1 29 0 231 218 18 0 chr10 56130680 56130735 -84186030 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 296 261 0 0 chr10 56130735 56130800 -84185965 + MLT1K LTR MaLR 522 586 -2 292 313 43 48 chr10 56130965 56131316 -84185449 + L1MCc LINE L1 1186 1534 -4889 288 225 22 22 chr10 56131523 56131612 -84185153 + L1MCc LINE L1 1934 2022 -4909 916 269 94 61 chr10 56131786 56132496 -84184269 + L1MCc LINE L1 2287 2973 -3968 2050 127 3 0 chr10 56132496 56132788 -84183977 + AluSg SINE Alu 1 293 -17 916 269 94 61 chr10 56132788 56133485 -84183280 + L1MCc LINE L1 2973 3713 -3228 294 206 0 0 chr10 56133493 56133561 -84183204 + (TA)n Simple_repeat Simple_repeat 1 68 0 328 278 66 72 chr10 56133749 56134062 -84182703 + LTR33A LTR ERVL 1 347 -176 22 80 0 0 chr10 56135851 56135901 -84180864 + AT_rich Low_complexity Low_complexity 1 50 0 2166 127 3 0 chr10 56135988 56136296 -84180469 - AluSg SINE Alu -1 309 1 1340 221 10 13 chr10 56136456 56136763 -84180002 - AluJo SINE Alu -6 306 1 26 30 0 0 chr10 56137171 56137204 -84179561 + AT_rich Low_complexity Low_complexity 1 33 0 465 196 10 29 chr10 56137240 56137342 -84179423 - MLT1E LTR MaLR -51 603 504 551 279 43 54 chr10 56137343 56137640 -84179125 - MLT1E LTR MaLR -222 345 30 925 257 99 44 chr10 56138615 56139000 -84177765 - MLT2B1 LTR ERVL -2 518 113 322 104 0 0 chr10 56139313 56139363 -84177402 - MLT2C2 LTR ERVL -4 460 400 521 289 86 34 chr10 56139634 56140226 -84176539 - L1M4 LINE L1 -907 5239 4617 1308 276 74 48 chr10 56140515 56141263 -84175502 - L1M4 LINE L1 -2638 3508 2716 575 71 12 0 chr10 56141263 56141348 -84175417 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1308 276 74 48 chr10 56141348 56141774 -84174991 - L1M4 LINE L1 -3430 2716 2303 441 198 0 0 chr10 56141867 56141993 -84174772 + (TA)n Simple_repeat Simple_repeat 2 127 0 236 205 96 24 chr10 56142002 56142085 -84174680 - L1MC4 LINE L1 -1339 6703 6615 234 300 0 0 chr10 56142094 56142184 -84174581 + L1MC4 LINE L1 6614 6703 -1339 2480 121 0 10 chr10 56142389 56142776 -84173989 + L1PA13 LINE L1 5777 6159 -4 720 147 8 16 chr10 56142867 56143025 -84173740 + AluSg/x SINE Alu 168 312 0 272 203 0 0 chr10 56143869 56143933 -84172832 - L1MA2 LINE L1 0 6304 6241 25 51 0 0 chr10 56144131 56144170 -84172595 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 56144351 56144372 -84172393 + AT_rich Low_complexity Low_complexity 1 21 0 1698 75 4 0 chr10 56144918 56145145 -84171620 + L1PA6 LINE L1 5920 6147 -7 23 33 0 0 chr10 56145589 56145619 -84171146 + AT_rich Low_complexity Low_complexity 1 30 0 1385 257 77 45 chr10 56145633 56146405 -84170360 + L1ME1 LINE L1 4967 5761 -405 4337 203 60 15 chr10 56146462 56147743 -84169022 + L1MC2 LINE L1 4901 6336 -8 670 287 43 34 chr10 56147742 56148094 -84168671 + L1ME1 LINE L1 5810 6164 -2 * 25 51 0 0 chr10 56148095 56148134 -84168631 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr10 56148604 56148632 -84168133 + AT_rich Low_complexity Low_complexity 1 28 0 2129 123 0 0 chr10 56150170 56150479 -84166286 - AluSq SINE Alu 0 313 5 33 25 0 0 chr10 56152087 56152127 -84164638 + AT_rich Low_complexity Low_complexity 1 40 0 468 109 13 37 chr10 56152167 56152263 -84164502 - L1MA8 LINE L1 -198 6102 6010 407 270 17 17 chr10 56152458 56152573 -84164192 - MER5B DNA MER1_type -6 172 58 829 285 33 9 chr10 56152632 56152969 -84163796 - L1MCa LINE L1 -3516 2910 2566 1094 210 41 58 chr10 56152973 56153268 -84163497 - L1MCa LINE L1 -6101 325 36 287 233 0 0 chr10 56153789 56153849 -84162916 + L2 LINE L2 3254 3313 0 21 36 0 0 chr10 56154776 56154804 -84161961 + AT_rich Low_complexity Low_complexity 1 28 0 29 47 0 0 chr10 56154951 56154994 -84161771 + AT_rich Low_complexity Low_complexity 1 43 0 617 294 17 0 chr10 56154997 56155174 -84161591 - MIR SINE MIR -25 237 58 21 36 0 0 chr10 56155241 56155269 -84161496 + AT_rich Low_complexity Low_complexity 1 28 0 27 73 0 0 chr10 56155465 56155520 -84161245 + AT_rich Low_complexity Low_complexity 1 55 0 34 42 0 0 chr10 56157322 56157370 -84159395 + AT_rich Low_complexity Low_complexity 1 48 0 613 246 152 49 chr10 56157676 56158005 -84158760 + MLT1C LTR MaLR 1 363 -104 360 0 0 0 chr10 56158025 56158065 -84158700 + (TTA)n Simple_repeat Simple_repeat 2 41 0 262 196 0 0 chr10 56158065 56158116 -84158649 + MLT1C LTR MaLR 452 502 -3 1446 204 48 85 chr10 56158361 56158738 -84158027 + MLT1A2 LTR MaLR 8 370 -4 364 190 0 100 chr10 56159324 56159424 -84157341 + MLT1D LTR MaLR 48 142 -325 429 138 32 0 chr10 56159475 56159569 -84157196 + (TA)n Simple_repeat Simple_repeat 1 97 0 54 72 0 0 chr10 56159571 56159640 -84157125 + AT_rich Low_complexity Low_complexity 1 69 0 22 56 0 0 chr10 56160008 56160044 -84156721 + AT_rich Low_complexity Low_complexity 1 36 0 350 181 28 0 chr10 56160341 56160413 -84156352 - AluS SINE Alu -225 74 1 549 67 0 0 chr10 56162318 56162393 -84154372 - L1PA11 LINE L1 0 6174 6100 211 232 24 24 chr10 56162934 56163016 -84153749 + (TAAA)n Simple_repeat Simple_repeat 2 83 0 612 179 26 0 chr10 56163083 56163200 -84153565 - L1MB1 LINE L1 -278 5890 5771 1273 175 8 12 chr10 56163200 56163445 -84153320 + L1MB1 LINE L1 5924 6168 0 262 285 117 39 chr10 56163691 56163870 -84152895 - MLT1J1 LTR MaLR -253 193 1 1630 188 68 86 chr10 56164035 56164111 -84152654 + MER44D DNA MER2_type 32 108 -2379 1981 116 25 0 chr10 56164111 56164415 -84152350 - AluSx SINE Alu 0 311 1 1630 188 68 86 chr10 56164415 56164863 -84151902 + MER44D DNA MER2_type 108 603 -2 373 316 131 19 chr10 56164937 56165143 -84151622 - L2 LINE L2 -820 2494 2266 236 311 22 0 chr10 56165943 56166033 -84150732 + MLT1L LTR MaLR 167 258 -357 2631 237 28 11 chr10 56168010 56168652 -84148113 - MER82 DNA MER2_type 0 653 1 220 193 57 11 chr10 56168653 56168741 -84148024 + (TA)n Simple_repeat Simple_repeat 2 93 0 347 317 100 28 chr10 56169056 56169305 -84147460 - L1ME3A LINE L1 -70 6100 5834 21 36 0 0 chr10 56170836 56170864 -84145901 + AT_rich Low_complexity Low_complexity 1 28 0 6189 227 20 26 chr10 56171996 56172070 -84144695 - L1 LINE L1 -923 5223 5150 2268 205 9 7 chr10 56172070 56172495 -84144270 - MSTB LTR MaLR 0 426 1 6189 227 20 26 chr10 56172495 56174082 -84142683 - L1 LINE L1 -996 5150 3573 5465 204 15 24 chr10 56174082 56175373 -84141392 - L1P5 LINE L1 -508 5705 4432 4914 65 3 0 chr10 56175373 56176002 -84140763 - L1PA7 LINE L1 -6 6148 5518 5465 204 15 24 chr10 56176002 56176356 -84140409 - L1P5 LINE L1 -1781 4432 4076 1951 241 18 40 chr10 56176356 56176507 -84140258 - L1 LINE L1 -3157 3046 2893 1277 190 48 61 chr10 56176507 56176802 -84139963 - AluJo SINE Alu -21 291 1 1951 241 18 40 chr10 56176802 56177272 -84139493 - L1 LINE L1 -3310 2893 2439 802 312 15 6 chr10 56177279 56177588 -84139177 - L1P5 LINE L1 -5335 868 465 2277 98 0 0 chr10 56177907 56178204 -84138561 - AluY SINE Alu -14 297 1 4809 183 41 24 chr10 56179964 56180857 -84135908 - L1MA6 LINE L1 0 7719 6843 1886 149 49 32 chr10 56180857 56181226 -84135539 + THE1C LTR MaLR 1 375 0 4809 183 41 24 chr10 56181226 56182265 -84134500 - L1MA6 LINE L1 -876 6843 5760 * 42270 34 23 1 chr10 56182252 56188269 -84128496 - L1PA2 LINE L1 -4 6151 2 5261 214 45 15 chr10 56188269 56189621 -84127144 - L1MA6 LINE L1 -1769 5796 4404 3334 252 73 42 chr10 56189617 56191770 -84124995 - L1MA6 LINE L1 -3490 4075 2055 * 291 308 45 42 chr10 56192033 56192345 -84124420 + ERVL LTR ERVL 3764 4076 -1688 459 328 6 17 chr10 56192496 56192676 -84124089 + ERVL LTR ERVL 4303 4480 -1284 453 314 95 4 chr10 56193003 56193255 -84123510 + HAL1 LINE L1 1546 1820 -687 23 33 0 0 chr10 56193633 56193663 -84123102 + AT_rich Low_complexity Low_complexity 1 30 0 267 282 51 0 chr10 56194102 56194180 -84122585 + MIR SINE MIR 12 93 -169 2001 116 7 14 chr10 56194414 56194707 -84122058 - AluSx SINE Alu -19 293 3 2903 6 0 0 chr10 56194739 56195057 -84121708 - AluYb8 SINE Alu 0 318 1 23 0 0 0 chr10 56196003 56196026 -84120739 + AT_rich Low_complexity Low_complexity 1 23 0 225 318 104 71 chr10 56197688 56197842 -84118923 + MIR3 SINE MIR 26 184 -24 1953 203 34 5 chr10 56198474 56198854 -84117911 + MSTB LTR MaLR 36 426 0 2170 107 0 19 chr10 56199090 56199400 -84117365 - AluSx SINE Alu -8 304 1 370 341 47 49 chr10 56200041 56200428 -84116337 + L1MC4a LINE L1 6542 6927 -881 293 337 51 10 chr10 56200682 56200878 -84115887 + L1MC4 LINE L1 7191 7394 -648 22 0 0 0 chr10 56200998 56201020 -84115745 + AT_rich Low_complexity Low_complexity 1 22 0 1103 65 0 0 chr10 56201169 56201308 -84115457 + L1PA7 LINE L1 5993 6131 -23 71 77 0 0 chr10 56202038 56202193 -84114572 + AT_rich Low_complexity Low_complexity 1 155 0 453 281 65 5 chr10 56202381 56202566 -84114199 + MER114 LTR ERV 1 196 -452 2212 278 60 41 chr10 56202743 56203492 -84113273 + L1M4b LINE L1 9 771 -6088 1529 278 34 45 chr10 56203506 56204108 -84112657 + L1M3e LINE L1 466 1041 -6518 3012 253 54 66 chr10 56204119 56205702 -84111063 + L1M3e LINE L1 2010 3469 -4096 1743 195 181 34 chr10 56205723 56206247 -84110518 + L1M4b LINE L1 978 1578 -5281 1976 228 49 4 chr10 56206428 56206901 -84109864 - LTR65 LTR ERV1 -155 514 21 28 0 0 0 chr10 56208776 56208804 -84107961 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 56208848 56208878 -84107887 + AT_rich Low_complexity Low_complexity 1 30 0 260 216 40 27 chr10 56208999 56209073 -84107692 - MER5A DNA MER1_type -28 161 87 459 324 73 27 chr10 56209314 56209533 -84107232 + L2 LINE L2 2508 2736 -578 243 0 0 0 chr10 56209555 56209582 -84107183 + (CA)n Simple_repeat Simple_repeat 1 27 0 784 271 73 76 chr10 56209772 56210327 -84106438 + MLT1E2 LTR MaLR 1 623 -3 554 372 44 25 chr10 56211801 56212335 -84104430 - ERVL LTR ERVL -3045 2609 2068 796 336 27 8 chr10 56212926 56213295 -84103470 - ERVL LTR ERVL -3657 1339 964 427 365 80 36 chr10 56213966 56214328 -84102437 - LTR16C LTR ERVL -53 438 61 1088 229 22 0 chr10 56216245 56216472 -84100293 - MLT1E LTR MaLR -1 592 361 707 266 34 11 chr10 56216466 56216643 -84100122 - MLT1E LTR MaLR -402 191 11 * 22 70 0 0 chr10 56216950 56216993 -84099772 + AT_rich Low_complexity Low_complexity 1 43 0 1209 304 64 49 chr10 56217044 56217793 -84098972 + L1ME3 LINE L1 5360 6119 -43 1853 80 0 16 chr10 56218090 56218340 -84098425 - AluY SINE Alu -13 298 53 1993 118 3 21 chr10 56219375 56219664 -84097101 + AluSg SINE Alu 1 284 -26 340 270 34 0 chr10 56219970 56220059 -84096706 + MIR SINE MIR 64 155 -107 3956 277 78 39 chr10 56220363 56222807 -84093958 + L1ME1 LINE L1 2401 4940 -1206 968 253 37 21 chr10 56222807 56223330 -84093435 + MLT1F1 LTR MaLR 1 563 -4 1211 238 61 22 chr10 56223356 56223717 -84093048 + L1ME1 LINE L1 5570 5944 -222 207 272 0 0 chr10 56224365 56224490 -84092275 + (CTATA)n Simple_repeat Simple_repeat 2 126 0 * 465 206 12 4 chr10 56224460 56224713 -84092052 + (TTATA)n Simple_repeat Simple_repeat 1 255 0 1810 184 13 20 chr10 56225644 56226035 -84090730 + MLT1B LTR MaLR 3 390 0 294 303 98 15 chr10 56226480 56226612 -84090153 - L2 LINE L2 0 3313 3171 234 94 0 0 chr10 56226976 56227008 -84089757 - L1MD1 LINE L1 -25 6217 6186 * 1094 235 3 29 chr10 56227007 56227318 -84089447 + L1MA4 LINE L1 5991 6293 -7 697 265 54 35 chr10 56227326 56227586 -84089179 - L1MD2 LINE L1 -55 6304 6040 511 309 7 7 chr10 56228450 56228602 -84088163 + MLT1L LTR MaLR 351 502 -113 30 0 0 0 chr10 56228712 56228742 -84088023 + AT_rich Low_complexity Low_complexity 1 30 0 495 279 77 53 chr10 56229976 56230577 -84086188 - Charlie2 DNA MER1_type -5 2857 2243 23 0 0 0 chr10 56230689 56230712 -84086053 + AT_rich Low_complexity Low_complexity 1 23 0 276 310 105 53 chr10 56230843 56231014 -84085751 - MIR SINE MIR 0 262 83 221 330 0 53 chr10 56231553 56231741 -84085024 + G-rich Low_complexity Low_complexity 1 178 0 212 174 29 43 chr10 56231839 56231908 -84084857 + (ATGTG)n Simple_repeat Simple_repeat 1 68 0 211 159 48 32 chr10 56231878 56231941 -84084824 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 * 1745 213 59 29 chr10 56231941 56232496 -84084269 - L1MB4 LINE L1 -9 6171 5710 217 303 0 0 chr10 56233445 56233521 -84083244 + A-rich Low_complexity Low_complexity 1 76 0 564 256 82 31 chr10 56233838 56234033 -84082732 - L2 LINE L2 0 3313 3109 10161 39 0 3 chr10 56234034 56236048 -84080717 + L1PA5 LINE L1 4137 6150 -4 250 236 0 0 chr10 56236051 56236123 -84080642 + A-rich Low_complexity Low_complexity 1 72 0 2201 127 16 24 chr10 56236208 56236586 -84080179 + THE1C LTR MaLR 1 375 0 546 299 124 46 chr10 56236629 56236671 -84080094 - L2 LINE L2 -349 2965 2928 1536 230 14 24 chr10 56236671 56237040 -84079725 + MLT1A1 LTR MaLR 1 365 0 546 299 124 46 chr10 56237040 56237409 -84079356 - L2 LINE L2 -386 2928 2522 1588 284 42 20 chr10 56237450 56238087 -84078678 - L1ME3 LINE L1 -17 6145 5495 688 161 0 17 chr10 56238108 56238226 -84078539 - FRAM SINE Alu -20 156 41 622 262 29 0 chr10 56238227 56238519 -84078246 - L1ME3 LINE L1 -671 5493 5191 * 4375 164 60 12 chr10 56238516 56239377 -84077388 - L1MB1 LINE L1 0 6168 5266 28 86 0 0 chr10 56239386 56239456 -84077309 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr10 56239475 56239496 -84077269 + AT_rich Low_complexity Low_complexity 1 21 0 285 306 72 0 chr10 56239498 56239609 -84077156 - L1MB1 LINE L1 -1062 5084 4966 244 215 126 185 chr10 56239756 56239891 -84076874 - MER5B DNA MER1_type -2 176 50 814 207 0 0 chr10 56239901 56240046 -84076719 - FRAM SINE Alu -30 146 2 240 270 32 16 chr10 56240047 56240110 -84076655 - MER5B DNA MER1_type -114 64 1 222 37 0 0 chr10 56240193 56240220 -84076545 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 22 35 0 0 chr10 56241340 56241369 -84075396 + AT_rich Low_complexity Low_complexity 1 29 0 385 50 33 0 chr10 56241449 56241509 -84075256 + (GA)n Simple_repeat Simple_repeat 1 62 0 504 257 166 0 chr10 56242016 56242203 -84074562 - L1MB1 LINE L1 -1557 4589 4372 1400 184 0 56 chr10 56242212 56242517 -84074248 - AluJo SINE Alu -24 288 1 2232 251 63 56 chr10 56242550 56242698 -84074067 - L1MB1 LINE L1 -1997 4149 4004 201 39 0 0 chr10 56242698 56242724 -84074041 + (TTG)n Simple_repeat Simple_repeat 3 28 0 2232 251 63 56 chr10 56242724 56243465 -84073300 - L1MB1 LINE L1 -2142 4004 3248 2328 105 0 0 chr10 56243465 56243778 -84072987 - AluSq SINE Alu 0 313 1 2232 251 63 56 chr10 56243778 56244017 -84072748 - L1MB1 LINE L1 -2898 3248 3012 * 4216 211 17 20 chr10 56243997 56245007 -84071758 - L1MD1 LINE L1 0 6242 5236 292 276 48 38 chr10 56244991 56245096 -84071669 - L1MDa LINE L1 -5549 991 886 * 248 234 16 0 chr10 56245765 56245829 -84070936 + CT-rich Low_complexity Low_complexity 2 66 0 384 347 78 12 chr10 56245952 56246197 -84070568 + MIR SINE MIR 1 261 -1 1346 229 134 31 chr10 56247679 56248103 -84068662 - LTR40a LTR ERVL -51 468 1 1201 35 0 0 chr10 56248857 56249002 -84067763 + L1PA7 LINE L1 5764 5908 -246 378 121 52 0 chr10 56249954 56250070 -84066695 + (TA)n Simple_repeat Simple_repeat 2 123 0 199 355 99 20 chr10 56250372 56250524 -84066241 - MIR SINE MIR -8 254 91 21 71 0 0 chr10 56251468 56251510 -84065255 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 56251759 56251788 -84064977 + AT_rich Low_complexity Low_complexity 1 29 0 284 279 130 13 chr10 56251805 56251959 -84064806 + Charlie8 DNA MER1_type 94 265 -2152 259 281 120 30 chr10 56252699 56252866 -84063899 - MIR SINE MIR -7 255 74 1231 216 72 49 chr10 56252905 56253253 -84063512 - MLT1A1 LTR MaLR 0 365 10 6591 74 8 7 chr10 56254434 56255455 -84061310 + L1PA7 LINE L1 5133 6154 0 718 117 5 1 chr10 56255512 56255778 -84060987 + AluSx SINE Alu 5 304 0 252 0 0 0 chr10 56255872 56255900 -84060865 + (CA)n Simple_repeat Simple_repeat 2 29 0 203 290 16 0 chr10 56256006 56256068 -84060697 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 412 304 82 7 chr10 56256245 56256380 -84060385 + MIR SINE MIR 20 164 -98 283 358 47 20 chr10 56258834 56258982 -84057783 - L2 LINE L2 0 3272 3121 3121 149 66 16 chr10 56259000 56259619 -84057146 + MER39B LTR ERV1 4 653 0 181 285 54 100 chr10 56259829 56259881 -84056884 - MIR3 SINE MIR -81 127 74 1881 136 0 38 chr10 56259881 56260197 -84056568 + AluSc SINE Alu 1 304 -5 181 285 54 100 chr10 56260197 56260274 -84056491 - MIR3 SINE MIR -134 74 4 354 311 49 33 chr10 56261326 56261509 -84055256 - MER58A DNA MER1_type 0 224 39 330 330 61 24 chr10 56261556 56261768 -84054997 + L1MB4 LINE L1 48 267 -6275 271 281 31 27 chr10 56262052 56262162 -84054603 + L1MB4 LINE L1 615 910 -5736 2737 108 5 26 chr10 56262206 56262630 -84054135 - L1PA11 LINE L1 -1 6173 5759 3052 247 50 35 chr10 56262740 56267535 -84049230 + L1MB4 LINE L1 817 5536 -1142 5746 102 0 4 chr10 56267535 56268539 -84048226 - L1PB1 LINE L1 0 6151 5159 3052 247 50 35 chr10 56268539 56269070 -84047695 + L1MB4 LINE L1 5536 6057 -621 1748 155 3 47 chr10 56269070 56269387 -84047378 - AluSx SINE Alu -9 303 1 3052 247 50 35 chr10 56269387 56270101 -84046664 + L1MB4 LINE L1 6057 6657 -21 388 275 248 7 chr10 56270179 56270328 -84046437 - MER5A DNA MER1_type 0 189 5 477 302 42 37 chr10 56270543 56270758 -84046007 + MIR SINE MIR 33 248 -14 21 57 0 0 chr10 56270970 56271005 -84045760 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 56271181 56271203 -84045562 + AT_rich Low_complexity Low_complexity 1 22 0 1776 178 89 0 chr10 56271345 56271715 -84045050 - MER57A LTR ERV1 0 403 1 1131 132 218 5 chr10 56271715 56271935 -84044830 - MER57A-int LTR ERV1 0 7537 7271 734 123 26 0 chr10 56271955 56272069 -84044696 - LTR54B LTR ERV1 -379 119 3 9272 107 17 5 chr10 56272073 56273397 -84043368 - MER57A-int LTR ERV1 -388 7149 5810 4946 266 176 26 chr10 56273397 56274923 -84041842 + MER52A LTR ERV1 1 1755 0 17384 123 17 14 chr10 56274923 56277716 -84039049 - MER57-int LTR ERV1 -1724 5813 3012 763 142 16 0 chr10 56277716 56277843 -84038922 - MER57-int LTR ERV1 -4628 2909 2781 * 1100 139 6 0 chr10 56277839 56278011 -84038754 - MER57-int LTR ERV1 -4908 2629 2457 288 119 0 0 chr10 56278007 56278049 -84038716 + MER57-int LTR ERV1 2400 2441 -5096 * 575 192 14 48 chr10 56278060 56278206 -84038559 - MLT1A1 LTR MaLR -224 141 1 470 261 71 66 chr10 56278206 56278632 -84038133 - L1M4 LINE L1 -3785 2597 2160 1279 218 41 8 chr10 56278857 56279193 -84037572 + MER74C LTR ERVL 3 413 -47 325 322 8 25 chr10 56279249 56279370 -84037395 + HERVL74 LTR ERVL 1 119 -5566 516 323 76 40 chr10 56279950 56280055 -84036710 + HERVL74 LTR ERVL 710 810 -4875 3643 120 19 73 chr10 56280055 56280736 -84036029 - LTR9B LTR ERV1 0 644 1 516 323 76 40 chr10 56280736 56280906 -84035859 + HERVL74 LTR ERVL 810 995 -4690 339 154 0 0 chr10 56280940 56281005 -84035760 + GA-rich Low_complexity Low_complexity 3 67 0 12809 213 42 32 chr10 56281131 56282290 -84034475 + HERVL74 LTR ERVL 1131 2276 -3409 1459 199 131 65 chr10 56282290 56282700 -84034065 + LTR36 LTR ERV1 1 462 -149 1669 134 20 0 chr10 56282700 56282977 -84033788 - AluSx SINE Alu 0 314 33 1459 199 131 65 chr10 56282977 56283138 -84033627 + LTR36 LTR ERV1 462 611 0 12809 213 42 32 chr10 56283138 56283500 -84033265 + HERVL74 LTR ERVL 2276 2633 -3052 2036 125 92 31 chr10 56283500 56283924 -84032841 + LTR7 LTR ERV1 1 450 0 12809 213 42 32 chr10 56283924 56285388 -84031377 + HERVL74 LTR ERVL 2633 4149 -1536 25 0 0 0 chr10 56285515 56285540 -84031225 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr10 56285598 56285641 -84031124 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr10 56285754 56285775 -84030990 + (CA)n Simple_repeat Simple_repeat 2 22 0 604 169 51 0 chr10 56288104 56288222 -84028543 - FLAM_C SINE Alu -9 124 1 2176 95 0 3 chr10 56288241 56288561 -84028204 + AluSq SINE Alu 1 319 0 341 239 9 0 chr10 56288949 56288993 -84027772 + GA-rich Low_complexity Low_complexity 2 44 -67 2134 110 0 3 chr10 56288993 56289283 -84027482 + AluSc SINE Alu 15 303 -6 341 239 9 0 chr10 56289283 56289347 -84027418 + GA-rich Low_complexity Low_complexity 44 111 0 216 0 0 0 chr10 56289643 56289667 -84027098 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1348 254 98 14 chr10 56289875 56290304 -84026461 - MLT1C LTR MaLR -2 465 1 3710 152 21 26 chr10 56290945 56291624 -84025141 - L1PA15-16 LINE L1 -3993 2856 2182 4385 163 14 0 chr10 56291625 56292382 -84024383 + L1PA16 LINE L1 5390 6157 -9 519 162 78 63 chr10 56292644 56292844 -84023921 + Charlie5 DNA MER1_type 1 200 -2412 452 197 84 14 chr10 56292838 56292980 -84023785 + Charlie5 DNA MER1_type 2348 2499 -113 * 27 0 0 0 chr10 56293266 56293293 -84023472 + AT_rich Low_complexity Low_complexity 1 27 0 340 335 91 26 chr10 56293736 56294076 -84022689 - L1ME4a LINE L1 -266 5855 5494 476 272 65 6 chr10 56295616 56295785 -84020980 + MER97c DNA MER1_type? 1 179 -911 468 263 8 4 chr10 56296089 56296272 -84020493 - MER41B LTR ERV1 -205 430 113 180 200 0 25 chr10 56296484 56296524 -84020241 + L2 LINE L2 3226 3264 -8 367 198 12 12 chr10 56297258 56297339 -84019426 - AluJo SINE Alu -2 300 220 260 237 21 65 chr10 56297389 56297482 -84019283 - L1MC4 LINE L1 -1339 6703 6615 225 356 0 0 chr10 56297409 56297499 -84019266 + L1MC4 LINE L1 6614 6703 -1339 * 309 183 0 0 chr10 56297511 56297571 -84019194 + (TA)n Simple_repeat Simple_repeat 2 61 0 1028 227 0 14 chr10 56297614 56297711 -84019054 - AluJo SINE Alu -95 217 120 234 0 0 0 chr10 56297711 56297737 -84019028 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1028 227 0 14 chr10 56297737 56297859 -84018906 - AluJo SINE Alu -192 120 1 277 200 64 9 chr10 56298176 56298286 -84018479 + (TA)n Simple_repeat Simple_repeat 2 117 0 1261 188 45 98 chr10 56298292 56298472 -84018293 + MLT1B LTR MaLR 1 152 -238 2268 96 0 26 chr10 56298472 56298784 -84017981 + AluSx SINE Alu 1 304 -8 1261 188 45 98 chr10 56298784 56298981 -84017784 + MLT1B LTR MaLR 152 358 -32 219 296 28 14 chr10 56299106 56299177 -84017588 + L2 LINE L2 3187 3258 -55 309 51 0 0 chr10 56299884 56299923 -84016842 + (CA)n Simple_repeat Simple_repeat 2 40 0 675 135 0 130 chr10 56301259 56301451 -84015314 + L1MA8 LINE L1 5968 6134 -157 2673 217 19 35 chr10 56301594 56302106 -84014659 - L1MC3 LINE L1 -6 7779 7279 1440 203 0 33 chr10 56302106 56302412 -84014353 - AluJo SINE Alu -16 296 1 2673 217 19 35 chr10 56302412 56302586 -84014179 - L1MC3 LINE L1 -506 7279 7104 425 270 122 24 chr10 56302745 56303163 -84013602 - MER113 DNA MER1_type? -61 460 2 2217 120 0 13 chr10 56303189 56303506 -84013259 + AluSq SINE Alu 1 313 0 2061 108 7 0 chr10 56305942 56306230 -84010535 + AluSg SINE Alu 1 290 -20 230 286 14 0 chr10 56306242 56306312 -84010453 + (TA)n Simple_repeat Simple_repeat 1 71 0 971 142 27 8 chr10 56306680 56306928 -84009837 + L1MC/D LINE L1 5203 5454 -743 1683 194 45 26 chr10 56307197 56307634 -84009131 + MER61D LTR ERV1 1 501 0 261 256 0 0 chr10 56307704 56307786 -84008979 + (TA)n Simple_repeat Simple_repeat 2 83 0 391 291 61 24 chr10 56307804 56307969 -84008796 - MIR SINE MIR -73 189 19 420 281 117 23 chr10 56308015 56308186 -84008579 + MER82 DNA MER2_type 444 630 -23 368 335 94 16 chr10 56310030 56310221 -84006544 - MIR SINE MIR 0 262 57 25 75 0 0 chr10 56312676 56312729 -84004036 + AT_rich Low_complexity Low_complexity 1 53 0 2010 0 0 5 chr10 56313575 56313796 -84002969 + AluYa5 SINE Alu 86 305 -6 221 348 68 25 chr10 56313874 56313992 -84002773 + MIR SINE MIR 18 140 -122 28 29 0 0 chr10 56314533 56314568 -84002197 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 56314789 56314821 -84001944 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr10 56315419 56315454 -84001311 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 56315674 56315695 -84001070 + AT_rich Low_complexity Low_complexity 1 21 0 265 364 75 0 chr10 56316228 56316456 -84000309 + MLT1J LTR MaLR 9 253 -258 447 289 223 11 chr10 56316634 56316907 -83999858 + Charlie2 DNA MER1_type 36 366 -2416 381 314 142 6 chr10 56317231 56317400 -83999365 - MIR SINE MIR -20 242 51 1183 215 59 0 chr10 56317759 56318066 -83998699 - Tigger3b DNA MER2_type -1 1230 906 3068 183 54 16 chr10 56318206 56318532 -83998233 - Tigger3b DNA MER2_type -2356 672 360 360 0 0 0 chr10 56318532 56318572 -83998193 + (CA)n Simple_repeat Simple_repeat 1 40 0 3068 183 54 16 chr10 56318572 56318890 -83997875 - Tigger3b DNA MER2_type -2668 360 3 839 263 84 24 chr10 56318895 56319412 -83997353 - L1ME LINE L1 -478 5686 5153 227 309 46 42 chr10 56319464 56319681 -83997084 - L1ME LINE L1 -1072 5074 4857 2043 133 21 44 chr10 56319693 56320077 -83996688 + THE1C LTR MaLR 1 375 0 10158 122 11 35 chr10 56320077 56321697 -83995068 + THE1C-int LTR MaLR 1 1580 0 1769 173 9 24 chr10 56321716 56322051 -83994714 + THE1C LTR MaLR 46 375 0 451 252 112 29 chr10 56322102 56322344 -83994421 - L1ME LINE L1 -1349 4797 4536 388 343 56 79 chr10 56322589 56322983 -83993782 - L1MC4a LINE L1 -1960 5848 5464 318 326 127 61 chr10 56323361 56323818 -83992947 - L2 LINE L2 -2 3311 2825 22 0 0 0 chr10 56324824 56324846 -83991919 + AT_rich Low_complexity Low_complexity 1 22 0 218 103 0 26 chr10 56325182 56325221 -83991544 + (TG)n Simple_repeat Simple_repeat 2 39 0 270 136 0 0 chr10 56327475 56327519 -83989246 + (T)n Simple_repeat Simple_repeat 1 44 0 421 163 0 0 chr10 56327551 56327631 -83989134 - L1MA4A LINE L1 -2 6301 6222 1584 161 42 11 chr10 56327664 56327949 -83988816 - AluSx SINE Alu -18 294 1 2565 32 0 7 chr10 56328069 56328377 -83988388 - AluY SINE Alu -5 306 1 211 339 15 0 chr10 56329350 56329415 -83987350 - L2 LINE L2 0 3313 3248 306 313 41 41 chr10 56330243 56330438 -83986327 - L2 LINE L2 -1623 1691 1497 195 42 0 0 chr10 56330591 56330615 -83986150 + (T)n Simple_repeat Simple_repeat 1 24 0 261 109 0 0 chr10 56332146 56332192 -83984573 + (CA)n Simple_repeat Simple_repeat 2 47 0 1280 120 9 5 chr10 56333160 56333376 -83983389 - L1MA5A LINE L1 0 6297 6081 306 193 24 24 chr10 56334183 56334266 -83982499 - L1M4 LINE L1 -3717 2927 2845 * 2922 216 40 31 chr10 56334257 56335286 -83981479 - L1MB4 LINE L1 0 6180 5035 1050 209 46 1 chr10 56335303 56335591 -83981174 - L1M4 LINE L1 -3933 2711 2415 497 29 0 15 chr10 56335646 56335714 -83981051 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 1839 131 7 11 chr10 56335716 56335999 -83980766 - AluSx SINE Alu -30 282 1 2536 246 50 47 chr10 56335999 56337062 -83979703 - L1M4 LINE L1 -4754 1892 829 279 229 8 34 chr10 56337068 56337096 -83979669 + A-rich Low_complexity Low_complexity 3 30 -87 1961 130 0 40 chr10 56337096 56337418 -83979347 + AluSx SINE Alu 1 309 -3 279 229 8 34 chr10 56337418 56337507 -83979258 + A-rich Low_complexity Low_complexity 30 117 0 279 331 33 0 chr10 56337585 56337706 -83979059 - L1M4 LINE L1 -5720 926 802 267 294 95 43 chr10 56338003 56338234 -83978531 - L1M4 LINE L1 -6291 251 9 236 271 0 12 chr10 56338240 56338325 -83978440 - L1M4 LINE L1 -3782 2364 2281 2288 112 0 0 chr10 56339347 56339660 -83977105 + AluSq SINE Alu 1 313 0 1398 315 14 9 chr10 56339700 56340135 -83976630 + L1PA13 LINE L1 227 663 -6124 3912 251 28 34 chr10 56340191 56341661 -83975104 + L1PA13 LINE L1 1347 2824 -3973 2068 125 10 3 chr10 56341661 56341965 -83974800 + AluSx SINE Alu 1 306 -6 3912 251 28 34 chr10 56341965 56342224 -83974541 + L1PA13 LINE L1 2824 3083 -3714 225 0 0 0 chr10 56342224 56342249 -83974516 + (CA)n Simple_repeat Simple_repeat 2 26 0 3912 251 28 34 chr10 56342249 56342623 -83974142 + L1PA13 LINE L1 3083 3481 -3316 437 83 71 0 chr10 56342746 56342830 -83973935 - Tigger7 DNA MER2_type -169 2418 2329 22 56 0 0 chr10 56343151 56343187 -83973578 + AT_rich Low_complexity Low_complexity 1 36 0 459 0 0 0 chr10 56343595 56343646 -83973119 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 27 49 0 0 chr10 56344517 56344558 -83972207 + AT_rich Low_complexity Low_complexity 1 41 0 2844 3 0 0 chr10 56344611 56344922 -83971843 + AluYa5 SINE Alu 1 311 0 264 141 84 99 chr10 56345441 56345512 -83971253 + MLT1A1 LTR MaLR 10 79 -286 25 65 0 0 chr10 56345913 56345959 -83970806 + AT_rich Low_complexity Low_complexity 1 46 0 2117 158 44 0 chr10 56345994 56346379 -83970386 + MER57A LTR ERV1 2 403 0 477 0 0 0 chr10 56346487 56346540 -83970225 + (TC)n Simple_repeat Simple_repeat 2 54 0 360 0 0 0 chr10 56346539 56346579 -83970186 + (TA)n Simple_repeat Simple_repeat 1 40 0 * 23 33 0 0 chr10 56347529 56347559 -83969206 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 56347721 56347745 -83969020 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 56348026 56348063 -83968702 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 56348388 56348411 -83968354 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr10 56348867 56348917 -83967848 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr10 56349037 56349064 -83967701 + AT_rich Low_complexity Low_complexity 1 27 0 1959 109 3 14 chr10 56349269 56349596 -83967169 - AluSg SINE Alu 0 324 1 252 250 0 0 chr10 56350053 56350165 -83966600 + C-rich Low_complexity Low_complexity 1 112 0 1959 109 3 14 chr10 56350292 56350609 -83966156 - AluSg SINE Alu 0 314 1 21 36 0 0 chr10 56351260 56351288 -83965477 + AT_rich Low_complexity Low_complexity 1 28 0 2126 168 58 7 chr10 56351389 56351799 -83964966 - MSTB1 LTR MaLR 0 432 2 254 330 38 0 chr10 56351843 56351949 -83964816 - L3b LINE CR1 -223 1360 1251 25 51 0 0 chr10 56352449 56352488 -83964277 + AT_rich Low_complexity Low_complexity 1 39 0 274 130 93 0 chr10 56354329 56354383 -83962382 + U2 snRNA snRNA 1 59 -129 326 355 44 33 chr10 56355078 56355261 -83961504 - MLT1G LTR MaLR -215 375 191 1228 277 42 21 chr10 56355280 56356639 -83960126 - L1ME LINE L1 -626 5540 4091 305 291 20 20 chr10 56356716 56356864 -83959901 - L1ME LINE L1 -2328 3818 3671 609 301 49 22 chr10 56356991 56357400 -83959365 - L1ME LINE L1 -2474 3672 3253 1401 167 36 22 chr10 56358346 56358622 -83958143 + AluJb SINE Alu 10 289 -23 21 36 0 0 chr10 56358622 56358650 -83958115 + AT_rich Low_complexity Low_complexity 1 28 0 232 350 58 21 chr10 56358756 56358999 -83957766 + L1ME3A LINE L1 5401 5652 -510 228 245 0 0 chr10 56358990 56359043 -83957722 + L1MC4 LINE L1 6652 6704 -1338 * 349 282 61 15 chr10 56359067 56359198 -83957567 + L1ME3A LINE L1 5657 5793 -377 242 315 81 25 chr10 56359241 56359438 -83957327 + L1ME3A LINE L1 5963 6170 0 470 259 52 18 chr10 56359495 56359665 -83957100 + MIR SINE MIR 48 222 -40 354 23 0 0 chr10 56360392 56360435 -83956330 + (CA)n Simple_repeat Simple_repeat 2 44 0 1380 263 50 24 chr10 56361473 56361975 -83954790 + L1ME3A LINE L1 5656 6170 0 1550 195 7 0 chr10 56362030 56362317 -83954448 + AluJb SINE Alu 5 293 -19 534 354 52 31 chr10 56362602 56363046 -83953719 - ERVL LTR ERVL -3974 1790 1338 183 268 0 0 chr10 56363087 56363128 -83953637 - L3 LINE CR1 -160 1417 1377 266 325 0 0 chr10 56363761 56363841 -83952924 + L2 LINE L2 3234 3313 0 182 279 49 0 chr10 56363945 56364006 -83952759 - L2 LINE L2 -1497 1817 1754 414 82 16 0 chr10 56364072 56364133 -83952632 - L1MA9 LINE L1 -167 6145 6084 381 271 94 77 chr10 56366421 56366771 -83949994 + L1MC/D LINE L1 3634 3989 -2157 1680 181 64 37 chr10 56367334 56367738 -83949027 + MSTC LTR MaLR 14 428 0 1886 272 77 123 chr10 56368227 56368612 -83948153 + L2 LINE L2 1345 1746 -1567 598 56 33 0 chr10 56368612 56368702 -83948063 - L1PA13 LINE L1 0 6163 6071 1886 272 77 123 chr10 56368702 56370051 -83946714 + L2 LINE L2 1746 2999 -314 358 328 100 42 chr10 56370448 56370689 -83946076 + L1MC/D LINE L1 5567 5821 -1987 27 29 0 0 chr10 56370774 56370808 -83945957 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 56370840 56370861 -83945904 + AT_rich Low_complexity Low_complexity 1 21 0 1959 98 0 62 chr10 56371558 56371864 -83944901 - AluY SINE Alu -1 310 24 275 344 183 5 chr10 56372154 56372340 -83944425 - MIR SINE MIR -26 236 18 2374 164 29 2 chr10 56372798 56373219 -83943546 + MSTB1 LTR MaLR 1 432 0 274 162 27 27 chr10 56375284 56375358 -83941407 + CT-rich Low_complexity Low_complexity 3 76 0 1034 243 125 3 chr10 56375532 56375820 -83940945 + MER21B LTR ERV1 20 342 -521 536 173 107 40 chr10 56375858 56376008 -83940757 + MER21B LTR ERV1 685 844 -19 288 223 29 48 chr10 56376149 56376252 -83940513 - MLT1K LTR MaLR 0 588 488 2298 92 0 0 chr10 56376916 56377211 -83939554 - AluSg SINE Alu -15 295 1 1972 129 4 4 chr10 56378702 56379003 -83937762 + AluSx SINE Alu 5 305 0 347 314 107 8 chr10 56379115 56379339 -83937426 + MLT1E LTR MaLR 8 254 -400 1255 210 113 0 chr10 56379352 56379609 -83937156 + AluJo SINE Alu 1 286 -26 300 83 0 0 chr10 56379619 56379667 -83937098 + (TG)n Simple_repeat Simple_repeat 2 49 0 192 40 0 0 chr10 56379670 56379695 -83937070 + (TA)n Simple_repeat Simple_repeat 1 25 0 864 289 55 19 chr10 56379789 56380100 -83936665 + MLT1E LTR MaLR 268 589 -4 311 330 6 28 chr10 56380310 56380489 -83936276 + GA-rich Low_complexity Low_complexity 2 176 0 4014 114 60 29 chr10 56380912 56381706 -83935059 - pTR5 LTR ERV1 0 2438 1632 1171 139 14 23 chr10 56383600 56383816 -83932949 - LTR45B LTR ERV1 -98 391 178 822 87 0 35 chr10 56384808 56384923 -83931842 - AluSq SINE Alu -130 183 73 363 103 0 0 chr10 56385020 56385078 -83931687 + AluJ/FLAM SINE Alu 49 99 -203 306 0 0 0 chr10 56385096 56385130 -83931635 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1450 209 21 29 chr10 56385210 56385584 -83931181 - MLT1A2 LTR MaLR 0 374 4 356 141 0 0 chr10 56387880 56387944 -83928821 - Alu SINE Alu -1 301 238 1143 196 62 111 chr10 56388089 56388620 -83928145 + MLT1D LTR MaLR 1 505 0 704 156 0 15 chr10 56388662 56388797 -83927968 - L1PA11 LINE L1 -2 6172 6040 473 96 14 0 chr10 56390755 56390828 -83925937 - Alu SINE Alu -3 306 233 1168 146 12 21 chr10 56390829 56391069 -83925696 + HERVH LTR ERV1 7475 7712 -1 240 281 46 7 chr10 56391124 56391277 -83925488 - L1MEc LINE L1 -4594 1802 1644 304 354 27 30 chr10 56391294 56391557 -83925208 + LTR16A LTR ERVL 183 444 -6 652 250 32 43 chr10 56392651 56392931 -83923834 - HERVH LTR ERV1 -282 7431 7155 * 3941 174 29 2 chr10 56392922 56393719 -83923046 - HERVH LTR ERV1 -1697 6016 5199 181 333 64 26 chr10 56394699 56394777 -83921988 - L3b LINE CR1 -57 1526 1446 207 0 0 0 chr10 56394881 56394904 -83921861 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 238 316 23 60 chr10 56394969 56395102 -83921663 - L2 LINE L2 -424 2890 2763 343 135 34 56 chr10 56395319 56395408 -83921357 - MER103 DNA DNA -79 87 1 182 271 21 21 chr10 56395543 56395591 -83921174 + MIR SINE MIR 21 68 -140 778 271 85 44 chr10 56395800 56396188 -83920577 - MLT1J2 LTR MaLR -4 446 43 1065 281 156 34 chr10 56396866 56396902 -83919863 + L2 LINE L2 1398 1428 -1886 2182 153 0 15 chr10 56396902 56397241 -83919524 - MER1B DNA MER1_type -3 334 1 1065 281 156 34 chr10 56397241 56397992 -83918773 + L2 LINE L2 1428 2281 -1033 416 266 113 0 chr10 56398268 56398392 -83918373 - MIR SINE MIR -7 255 118 304 336 9 0 chr10 56398412 56398519 -83918246 + MIR SINE MIR 154 261 -1 770 158 0 16 chr10 56399439 56399566 -83917199 - AluJb SINE Alu -103 209 85 626 131 19 0 chr10 56399847 56399954 -83916811 + THE1C LTR MaLR 267 375 0 1722 196 68 29 chr10 56400089 56400532 -83916233 - LTR2B LTR ERV1 0 490 31 429 20 0 0 chr10 56400754 56400804 -83915961 + (CA)n Simple_repeat Simple_repeat 2 51 0 215 230 35 124 chr10 56400938 56401051 -83915714 + L2 LINE L2 3168 3270 -2 199 135 0 68 chr10 56401939 56402013 -83914752 + (CCCCCT)n Simple_repeat Simple_repeat 3 71 0 2778 258 27 2 chr10 56402193 56402833 -83913932 + L1M4 LINE L1 824 1479 -5174 2461 70 0 13 chr10 56402845 56403157 -83913608 + AluY SINE Alu 1 308 -3 205 250 0 0 chr10 56404159 56404203 -83912562 + CT-rich Low_complexity Low_complexity 3 46 0 26 30 0 0 chr10 56404449 56404482 -83912283 + AT_rich Low_complexity Low_complexity 1 33 0 1174 249 142 59 chr10 56405305 56406391 -83910374 + L1M4 LINE L1 4014 5189 -1543 214 245 0 20 chr10 56406684 56406733 -83910032 + SUBTEL_sa Satellite Satellite 44 91 -83 1610 189 105 0 chr10 56406914 56407257 -83909508 + LTR51 LTR ERV1 293 671 0 28 29 0 0 chr10 56407773 56407808 -83908957 + AT_rich Low_complexity Low_complexity 1 35 0 2029 150 0 6 chr10 56408551 56408865 -83907900 - AluSx SINE Alu 0 312 1 333 290 14 28 chr10 56411821 56411966 -83904799 + L1MC4 LINE L1 7690 7832 -210 184 296 31 51 chr10 56412299 56412397 -83904368 - L2 LINE L2 -1894 1420 1325 30 45 0 0 chr10 56412428 56412472 -83904293 + AT_rich Low_complexity Low_complexity 1 44 0 192 343 61 30 chr10 56412497 56412596 -83904169 - L2 LINE L2 -2145 1169 1068 38 39 0 0 chr10 56413486 56413538 -83903227 + AT_rich Low_complexity Low_complexity 1 52 0 2221 124 24 11 chr10 56414188 56414566 -83902199 - L1PA13 LINE L1 -3 6160 5778 6200 166 8 10 chr10 56414566 56415775 -83900990 + L1P LINE L1 3361 4567 -1579 32 57 0 0 chr10 56417844 56417897 -83898868 + AT_rich Low_complexity Low_complexity 1 53 0 22 35 0 0 chr10 56417983 56418012 -83898753 + AT_rich Low_complexity Low_complexity 1 29 0 192 241 0 0 chr10 56418045 56418103 -83898662 + (CACCAT)n Simple_repeat Simple_repeat 5 62 0 225 286 53 38 chr10 56418105 56418238 -83898527 - MIR SINE MIR 0 262 128 1368 265 96 34 chr10 56418242 56419363 -83897402 - L1ME LINE L1 -379 5787 4600 3912 145 5 5 chr10 56419522 56420188 -83896577 - HERVH LTR ERV1 -3083 4630 3994 3302 164 7 15 chr10 56420180 56420782 -83895983 - HERVH LTR ERV1 -3977 3736 3140 * 13938 133 9 20 chr10 56420761 56423476 -83893289 - HERVH LTR ERV1 -4718 2995 1 2068 97 33 6 chr10 56423476 56423865 -83892900 - LTR7 LTR ERV1 0 450 1 2100 272 104 34 chr10 56423931 56424486 -83892279 + L1M4 LINE L1 2246 2761 -3385 2216 75 3 7 chr10 56424486 56424780 -83891985 + AluY SINE Alu 1 293 -18 2100 272 104 34 chr10 56424780 56425619 -83891146 + L1M4 LINE L1 2761 3738 -2408 232 267 12 0 chr10 56425660 56425746 -83891019 - L1MEc LINE L1 -4898 1498 1412 21 0 0 0 chr10 56425753 56425774 -83890991 + AT_rich Low_complexity Low_complexity 1 21 0 771 296 44 30 chr10 56425841 56425982 -83890783 + L1MEc LINE L1 49 186 -6210 2144 90 27 3 chr10 56425982 56426283 -83890482 + AluSc SINE Alu 1 308 -1 771 296 44 30 chr10 56426283 56426547 -83890218 + L1MEc LINE L1 186 460 -5936 203 272 174 11 chr10 56426670 56426762 -83890003 - L2 LINE L2 -10 3303 3197 395 176 0 0 chr10 56427264 56427332 -83889433 - MLT-int LTR MaLR -13 1722 1655 213 319 42 0 chr10 56427571 56427643 -83889122 - L2 LINE L2 -8 3264 3190 229 104 188 0 chr10 56427986 56428034 -83888731 - MLT1A2 LTR MaLR -1 373 317 2194 99 6 26 chr10 56428061 56428374 -83888391 + AluSx SINE Alu 6 312 0 1793 192 64 32 chr10 56428446 56428853 -83887912 - MLT1A2-int LTR MaLR -22 1713 1294 228 239 15 45 chr10 56429065 56429132 -83887633 - MLT1A2-int LTR MaLR -484 887 823 2765 228 44 11 chr10 56429190 56429317 -83887448 - MLT1A2-int LTR MaLR -1073 662 541 272 27 27 0 chr10 56429317 56429354 -83887411 + (TA)n Simple_repeat Simple_repeat 2 39 0 2765 228 44 11 chr10 56429354 56429866 -83886899 - MLT1A2-int LTR MaLR -1194 541 2 350 169 70 0 chr10 56429868 56429939 -83886826 - MLT1A2 LTR MaLR -1 373 298 617 150 71 0 chr10 56429941 56430068 -83886697 + MLT1A1-int LTR MaLR 1600 1735 0 987 202 62 55 chr10 56430077 56430349 -83886416 + MLT1A1 LTR MaLR 10 283 -82 2640 247 33 16 chr10 56430495 56431899 -83884866 + L1PB2 LINE L1 2380 6009 -142 * 5762 91 3 0 chr10 56431272 56432053 -83884712 + L1PA10 LINE L1 5386 6168 0 * 8291 230 18 11 chr10 56432028 56434645 -83882120 + L1MA9 LINE L1 3134 5771 -541 648 261 52 0 chr10 56434666 56434819 -83881946 - MLT1G1 LTR MaLR -434 161 1 414 279 95 32 chr10 56434824 56434860 -83881905 + L1M4 LINE L1 3297 3329 -2817 314 100 88 88 chr10 56434860 56434940 -83881825 + MADE1 DNA Mariner 1 80 0 414 279 95 32 chr10 56434940 56435093 -83881672 + L1M4 LINE L1 3329 3498 -2648 25 51 0 0 chr10 56435729 56435768 -83880997 + AT_rich Low_complexity Low_complexity 1 39 0 1339 201 185 25 chr10 56435862 56436300 -83880465 + L1MA9 LINE L1 5767 6274 -38 336 24 0 0 chr10 56436656 56436697 -83880068 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 128 13 51 chr10 56437620 56437698 -83879067 - L1PA10 LINE L1 -1 6167 6093 268 267 52 9 chr10 56440026 56440142 -83876623 - L1ME4a LINE L1 -21 6100 5980 26 30 0 0 chr10 56441786 56441819 -83874946 + AT_rich Low_complexity Low_complexity 1 33 0 208 139 28 0 chr10 56443022 56443058 -83873707 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 347 36 54 chr10 56443403 56443625 -83873140 + MIR SINE MIR 2 219 -43 1531 189 51 111 chr10 56443630 56444209 -83872556 - MER67C LTR ERV1 -4 510 1 724 273 34 52 chr10 56444460 56444841 -83871924 + MLT1A2 LTR MaLR 1 374 0 494 276 12 65 chr10 56444942 56445112 -83871653 - MIR SINE MIR -2 260 100 21 57 0 0 chr10 56445637 56445672 -83871093 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr10 56445729 56445771 -83870994 + AT_rich Low_complexity Low_complexity 1 42 0 371 268 42 47 chr10 56445839 56446006 -83870759 + L1ME LINE L1 5434 5602 -560 250 340 45 13 chr10 56446010 56446166 -83870599 + L1ME LINE L1 5640 5800 -370 681 255 15 10 chr10 56446177 56446381 -83870384 - MER3 DNA MER1_type -4 205 1 751 206 0 0 chr10 56446541 56446672 -83870093 + FLAM_C SINE Alu 3 133 0 2803 213 25 10 chr10 56446794 56447467 -83869298 - L1MB2 LINE L1 0 6171 5489 2307 111 23 14 chr10 56448643 56448995 -83867770 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr10 56449907 56449929 -83866836 + AT_rich Low_complexity Low_complexity 1 22 0 3505 221 52 12 chr10 56450062 56450550 -83866215 - L1MC1 LINE L1 -6 6327 5860 2902 150 35 6 chr10 56450550 56451037 -83865728 - MER61D LTR ERV1 0 501 1 3505 221 52 12 chr10 56451037 56451468 -83865297 - L1MC1 LINE L1 -473 5860 5388 3071 123 13 48 chr10 56452066 56452719 -83864046 - MER4B LTR ERV1 0 779 2 1242 201 109 6 chr10 56452996 56453432 -83863333 - LTR36 LTR ERV1 0 611 54 29 0 0 0 chr10 56456635 56456664 -83860101 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr10 56456904 56456951 -83859814 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 56457134 56457163 -83859602 + AT_rich Low_complexity Low_complexity 1 29 0 965 219 135 42 chr10 56457198 56457531 -83859234 - MLT1A1 LTR MaLR -1 364 1 183 42 0 0 chr10 56457538 56457562 -83859203 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1661 143 55 0 chr10 56457564 56457836 -83858929 - AluSx SINE Alu -25 287 1 249 33 0 0 chr10 56458051 56458081 -83858684 + (TG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr10 56458312 56458334 -83858431 + AT_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr10 56458341 56458375 -83858390 + (TG)n Simple_repeat Simple_repeat 2 35 0 2486 40 3 0 chr10 56459391 56459688 -83857077 - AluY SINE Alu -13 298 1 223 240 107 27 chr10 56460060 56460135 -83856630 - L2 LINE L2 -3 3310 3230 1100 150 21 60 chr10 56460156 56460389 -83856376 + Tigger2a DNA MER2_type 1 224 -210 2710 155 24 2 chr10 56460408 56460859 -83855906 - L1PA16 LINE L1 -4 6162 5702 2251 220 11 0 chr10 56460859 56461382 -83855383 + L1 LINE L1 4305 4833 -1313 1853 123 18 0 chr10 56461387 56461694 -83855071 - AluSg SINE Alu 0 312 1 1099 204 23 0 chr10 56461694 56461910 -83854855 + Tigger2a DNA MER2_type 223 443 -1 312 383 16 5 chr10 56464051 56464244 -83852521 + L1MEc LINE L1 107 301 -6095 1474 210 30 57 chr10 56464270 56464708 -83852057 - L1MA8 LINE L1 -1135 5011 4586 2179 186 45 18 chr10 56464710 56464785 -83851980 + L1MA8 LINE L1 5018 5089 -1202 2338 183 119 33 chr10 56464785 56465358 -83851407 - LTR29 LTR ERV1 0 622 1 2179 186 45 18 chr10 56465358 56465943 -83850822 + L1MA8 LINE L1 5089 5693 -598 785 258 57 22 chr10 56465943 56466281 -83850484 - LTR35 LTR ERV1 0 677 336 2975 168 24 5 chr10 56466521 56466937 -83849828 + L1MA8 LINE L1 5688 6120 -171 4437 132 51 9 chr10 56466937 56467685 -83849080 + MER4E LTR ERV1 1 779 0 2975 168 24 5 chr10 56467685 56467857 -83848908 + L1MA8 LINE L1 6120 6287 -4 3487 95 4 0 chr10 56467901 56468385 -83848380 - LTR19A LTR ERV1 0 486 1 220 271 35 0 chr10 56468425 56468510 -83848255 + (TA)n Simple_repeat Simple_repeat 2 89 0 1000 252 95 35 chr10 56468712 56469502 -83847263 - L1ME LINE L1 -478 5686 4847 1153 214 121 21 chr10 56469985 56470316 -83846449 - MLT1A1 LTR MaLR -1 364 1 279 256 62 85 chr10 56470808 56470937 -83845828 + MIR SINE MIR 51 151 -57 3995 55 2 2 chr10 56471042 56471552 -83845213 - L1PA7 LINE L1 -6 6148 5639 1359 270 59 15 chr10 56471554 56472031 -83844734 - Charlie1a DNA MER1_type -955 500 3 469 295 137 29 chr10 56472151 56472493 -83844272 - ERVL LTR ERVL -3188 2576 2198 189 0 0 0 chr10 56474035 56474056 -83842709 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 25 31 0 0 chr10 56474366 56474398 -83842367 + AT_rich Low_complexity Low_complexity 1 32 0 1852 138 44 73 chr10 56474616 56475000 -83841765 + THE1C LTR MaLR 1 373 -2 4065 41 0 0 chr10 56475556 56476041 -83840724 - L1PA5 LINE L1 -2 6152 5668 10443 224 79 10 chr10 56477214 56478952 -83837813 - L1PA16 LINE L1 -2 6221 4605 401 54 43 174 chr10 56478952 56479044 -83837721 + MADE1 DNA Mariner 1 80 0 10443 224 79 10 chr10 56479044 56480153 -83836612 - L1PA16 LINE L1 -1618 4605 3574 1957 147 72 26 chr10 56480153 56480501 -83836264 + THE1B LTR MaLR 1 364 0 10443 224 79 10 chr10 56480501 56482769 -83833996 - L1PA16 LINE L1 -2649 3574 727 259 308 151 14 chr10 56482831 56482977 -83833788 - L1PA16 LINE L1 -5645 559 394 279 313 96 66 chr10 56483188 56483460 -83833305 - L1M2 LINE L1 -5772 1077 798 397 281 18 0 chr10 56484425 56484539 -83832226 - L1M2 LINE L1 -6724 125 10 828 10 0 0 chr10 56484994 56485091 -83831674 - L1PA2 LINE L1 0 6155 6059 232 314 48 29 chr10 56485314 56485419 -83831346 - MIR SINE MIR -106 156 50 21 0 0 0 chr10 56485469 56485490 -83831275 + AT_rich Low_complexity Low_complexity 1 21 0 232 312 64 28 chr10 56485812 56485921 -83830844 + L2 LINE L2 2948 3060 -212 289 190 20 0 chr10 56487109 56487209 -83829556 + (TA)n Simple_repeat Simple_repeat 2 103 0 239 318 99 11 chr10 56487528 56487893 -83828872 - L1M4 LINE L1 -2205 3941 3545 1406 168 81 32 chr10 56488080 56488390 -83828375 + THE1C LTR MaLR 51 375 0 30 0 0 0 chr10 56488593 56488623 -83828142 + AT_rich Low_complexity Low_complexity 1 30 0 503 306 59 0 chr10 56489084 56489303 -83827462 + L1ME LINE L1 3679 3910 -2236 1140 242 45 7 chr10 56489307 56489744 -83827021 + MLT1D LTR MaLR 3 505 0 455 330 10 27 chr10 56489744 56490038 -83826727 + L1ME LINE L1 3908 4196 -1950 1189 264 49 29 chr10 56490046 56490121 -83826644 + L1ME LINE L1 4768 4840 -1326 1828 176 55 3 chr10 56490121 56490467 -83826298 - THE1B LTR MaLR 0 364 1 1189 264 49 29 chr10 56490467 56491278 -83825487 + L1ME LINE L1 4840 5664 -502 236 289 36 140 chr10 56491669 56492033 -83824732 + L2 LINE L2 2850 3175 -138 268 371 0 9 chr10 56492105 56492221 -83824544 + L2 LINE L2 3188 3302 -11 2067 154 9 43 chr10 56492227 56492383 -83824382 + MER1B DNA MER1_type 2 162 -2550 1568 159 76 92 chr10 56492383 56492817 -83823948 - MSTA LTR MaLR 0 428 2 8919 147 21 31 chr10 56492822 56494413 -83822352 - THE1C-int LTR MaLR -4 1576 1 1744 157 69 36 chr10 56494413 56494776 -83821989 - THE1C LTR MaLR 0 375 1 2067 154 9 43 chr10 56494776 56494962 -83821803 + MER1B DNA MER1_type 164 339 0 24 32 0 0 chr10 56496307 56496338 -83820427 + AT_rich Low_complexity Low_complexity 1 31 0 492 117 0 0 chr10 56496813 56496890 -83819875 + (TA)n Simple_repeat Simple_repeat 1 77 0 28 0 0 0 chr10 56497158 56497186 -83819579 + AT_rich Low_complexity Low_complexity 1 28 0 257 318 37 28 chr10 56497463 56497570 -83819195 + MIR SINE MIR 23 130 -132 342 233 0 12 chr10 56498625 56498711 -83818054 + L3b LINE CR1 1114 1198 -385 2487 44 0 3 chr10 56499575 56499871 -83816894 - AluY SINE Alu -16 295 1 242 318 0 0 chr10 56499876 56499939 -83816826 + MIR SINE MIR 53 115 -147 251 27 0 27 chr10 56500278 56500315 -83816450 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 5054 109 89 129 chr10 56501941 56503378 -83813387 - pTR5 LTR ERV1 -143 2295 743 183 288 0 0 chr10 56503407 56503473 -83813292 + GA-rich Low_complexity Low_complexity 3 68 0 202 139 23 0 chr10 56503496 56503539 -83813226 + (TA)n Simple_repeat Simple_repeat 2 45 0 211 338 0 0 chr10 56503541 56503618 -83813147 + GA-rich Low_complexity Low_complexity 4 80 0 719 279 187 30 chr10 56504662 56504935 -83811830 - L1MC4 LINE L1 -142 7900 7671 303 28 0 0 chr10 56504935 56504971 -83811794 + (TA)n Simple_repeat Simple_repeat 2 37 0 719 279 187 30 chr10 56504971 56505270 -83811495 - L1MC4 LINE L1 -371 7671 7238 839 127 11 0 chr10 56505340 56505475 -83811290 - THE1C LTR MaLR 0 375 244 3172 144 14 2 chr10 56505477 56506055 -83810710 - L1 LINE L1 -1265 6300 5716 * 3772 204 10 1 chr10 56506052 56506733 -83810032 - L1 LINE L1 -6234 1331 645 3530 197 31 12 chr10 56506752 56507590 -83809175 - L1 LINE L1 -1491 5357 4504 2720 138 25 0 chr10 56507588 56507988 -83808777 + THE1B-int LTR MaLR 676 1085 -495 * 2537 83 3 0 chr10 56507986 56508324 -83808441 + THE1B-int LTR MaLR 1242 1580 0 * 2211 135 49 0 chr10 56508324 56508671 -83808094 + THE1B LTR MaLR 1 364 0 1785 225 34 70 chr10 56508672 56509484 -83807281 - L1 LINE L1 -3427 3421 2636 2065 131 7 7 chr10 56510462 56510768 -83805997 + AluSx SINE Alu 1 306 -6 506 273 104 21 chr10 56510922 56511211 -83805554 + L1MCc LINE L1 110 422 -6001 285 316 106 17 chr10 56511742 56511979 -83804786 + L1MCc LINE L1 2434 2691 -4431 1163 247 67 22 chr10 56512034 56512390 -83804375 + MLT2B1 LTR ERVL 1 372 -148 1551 200 0 0 chr10 56512390 56512685 -83804080 - L1MD2 LINE L1 -383 5976 5682 1935 250 29 20 chr10 56512712 56513269 -83803496 + L1MCb LINE L1 418 979 -5066 4854 51 3 2 chr10 56513297 56513902 -83802863 - L1PA5 LINE L1 -4 6150 5545 706 23 0 0 chr10 56513902 56513989 -83802776 + L1P LINE L1 5107 5193 -953 * 1234 224 48 21 chr10 56513988 56514276 -83802489 + L1MCb LINE L1 979 1284 -5280 1744 78 4 17 chr10 56514276 56514507 -83802258 + AluY SINE Alu 66 293 -18 1234 224 48 21 chr10 56514507 56514651 -83802114 + L1MCb LINE L1 1284 1423 -5141 1582 265 47 35 chr10 56514701 56515570 -83801195 + L1MCb LINE L1 3173 4052 -2512 609 249 5 27 chr10 56515564 56515749 -83801016 + L1M4 LINE L1 4932 5112 -1034 * 562 310 13 0 chr10 56515749 56515904 -83800861 - MLT1F LTR MaLR -384 158 2 528 284 36 52 chr10 56515969 56516163 -83800602 + MIR SINE MIR 57 247 -15 38 22 0 0 chr10 56516361 56516406 -83800359 + AT_rich Low_complexity Low_complexity 1 45 0 2266 110 7 0 chr10 56516797 56517106 -83799659 + AluSp SINE Alu 2 312 -1 554 269 112 0 chr10 56517674 56517916 -83798849 - LTR37B LTR ERV1 -2 466 198 239 184 145 26 chr10 56519249 56519325 -83797440 - Charlie8 DNA MER1_type -2301 116 32 2076 114 3 3 chr10 56520070 56520369 -83796396 + AluSg SINE Alu 11 309 -1 184 234 21 0 chr10 56520376 56520423 -83796342 + MIR SINE MIR 89 136 -126 1637 201 87 17 chr10 56520708 56521111 -83795654 - MSTB1 LTR MaLR -1 431 1 1382 201 166 42 chr10 56521504 56521932 -83794833 - MLT1D LTR MaLR -24 481 1 21 0 0 0 chr10 56522506 56522527 -83794238 + AT_rich Low_complexity Low_complexity 1 21 0 420 278 42 0 chr10 56522817 56522961 -83793804 - L1MD2 LINE L1 -16 6343 6194 1825 144 0 0 chr10 56524020 56524291 -83792474 + AluY SINE Alu 6 276 -35 231 103 0 0 chr10 56524541 56524580 -83792185 + (CA)n Simple_repeat Simple_repeat 2 40 0 411 38 0 0 chr10 56524920 56524973 -83791792 + (CA)n Simple_repeat Simple_repeat 1 53 0 8657 229 44 36 chr10 56525243 56525682 -83791083 + L1MA9 LINE L1 2550 2984 -3328 1779 197 24 15 chr10 56525682 56526022 -83790743 - MER61A LTR ERV1 0 343 1 8657 229 44 36 chr10 56526022 56526191 -83790574 + L1MA9 LINE L1 2984 3150 -3162 12866 112 14 8 chr10 56526191 56528159 -83788606 - L1PA8 LINE L1 0 6172 4219 2467 71 0 7 chr10 56528159 56528468 -83788297 + AluY SINE Alu 1 307 -4 12866 112 14 8 chr10 56528468 56529150 -83787615 - L1PA8 LINE L1 -1953 4219 3504 210 37 0 0 chr10 56529150 56529177 -83787588 + (TTG)n Simple_repeat Simple_repeat 1 27 0 12866 112 14 8 chr10 56529177 56529302 -83787463 - L1PA8 LINE L1 -2668 3504 3381 8657 229 44 36 chr10 56529302 56529893 -83786872 + L1MA9 LINE L1 3150 3735 -2577 248 0 31 0 chr10 56529893 56529925 -83786840 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2093 80 0 7 chr10 56529927 56530202 -83786563 - AluY SINE Alu -28 283 11 8657 229 44 36 chr10 56530202 56531838 -83784927 + L1MA9 LINE L1 3735 5356 -956 1468 92 31 123 chr10 56531838 56532184 -83784581 - AluYb8 SINE Alu 0 317 1 8657 229 44 36 chr10 56532184 56532826 -83783939 + L1MA9 LINE L1 5356 6073 -239 1990 99 0 80 chr10 56532826 56533140 -83783625 + AluSc SINE Alu 1 289 -20 8657 229 44 36 chr10 56533140 56533344 -83783421 + L1MA9 LINE L1 6073 6274 -38 26 30 0 0 chr10 56533344 56533377 -83783388 + AT_rich Low_complexity Low_complexity 1 33 0 663 242 4 57 chr10 56533605 56533853 -83782912 + L1ME2 LINE L1 5738 5972 -192 1094 259 70 42 chr10 56534685 56535044 -83781721 + MLT1E LTR MaLR 225 593 0 224 214 0 0 chr10 56535299 56535341 -83781424 + (TG)n Simple_repeat Simple_repeat 1 42 0 1701 264 72 38 chr10 56535753 56536612 -83780153 + MER97a DNA MER1_type? 7 894 0 2211 105 3 3 chr10 56538190 56538495 -83778270 + AluSq SINE Alu 1 305 -8 220 284 78 29 chr10 56539325 56539427 -83777338 + MIR SINE MIR 23 129 -79 394 258 26 19 chr10 56539501 56539656 -83777109 + MER104 DNA Tc2 1 156 -24 1585 261 91 0 chr10 56539749 56540209 -83776556 - L1MDa LINE L1 -6015 525 24 381 325 85 20 chr10 56540260 56540460 -83776305 + MIR SINE MIR 49 261 -1 31 26 0 0 chr10 56540479 56540517 -83776248 + AT_rich Low_complexity Low_complexity 1 38 0 258 81 0 0 chr10 56540956 56540993 -83775772 + (CA)n Simple_repeat Simple_repeat 2 38 0 1177 202 91 0 chr10 56542509 56542761 -83774004 + L1PA16 LINE L1 5890 6164 -2 401 280 92 40 chr10 56542762 56543087 -83773678 + L1ME2 LINE L1 1587 1928 -4612 549 304 43 37 chr10 56543346 56543672 -83773093 + L1ME2 LINE L1 2285 2612 -4109 398 294 67 10 chr10 56543675 56543869 -83772896 + L1ME2 LINE L1 6109 6313 -245 990 302 41 47 chr10 56543879 56544538 -83772227 - L1ME3A LINE L1 -135 6035 5381 230 328 62 8 chr10 56544534 56544662 -83772103 - L1ME3A LINE L1 -1207 4939 4805 * 2239 84 0 7 chr10 56544785 56545084 -83771681 + THE1C LTR MaLR 1 297 -78 22 56 0 0 chr10 56545125 56545161 -83771604 + AT_rich Low_complexity Low_complexity 1 36 0 331 264 77 71 chr10 56545202 56545384 -83771381 - L1ME3A LINE L1 -2299 3847 3665 353 188 49 76 chr10 56545444 56545588 -83771177 + L1ME LINE L1 5321 5460 -704 1257 204 110 40 chr10 56546669 56547096 -83769669 + MSTB2 LTR MaLR 1 457 0 641 115 197 8 chr10 56547207 56547329 -83769436 - MSTA LTR MaLR -239 189 45 183 80 0 0 chr10 56547332 56547357 -83769408 + (A)n Simple_repeat Simple_repeat 1 25 0 532 192 57 78 chr10 56547358 56547551 -83769214 - L1M3 LINE L1 -707 5473 5285 * 1192 223 66 39 chr10 56547546 56547955 -83768810 + L1M4c LINE L1 917 1336 -5048 687 225 0 18 chr10 56547952 56548121 -83768644 - L1M3 LINE L1 -1194 4952 4787 * 3180 137 53 34 chr10 56548126 56548709 -83768056 - LTR1 LTR ERV1 0 785 192 916 133 0 46 chr10 56548929 56549080 -83767685 + AluSg/x SINE Alu 137 280 -32 180 0 0 0 chr10 56549080 56549100 -83767665 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 607 267 17 6 chr10 56549105 56549281 -83767484 - L1M3 LINE L1 -1411 4735 4558 392 0 21 0 chr10 56549300 56549348 -83767417 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 2295 265 39 13 chr10 56549359 56549974 -83766791 + MER82 DNA MER2_type 23 653 0 230 245 0 0 chr10 56549989 56550042 -83766723 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 2128 152 66 29 chr10 56550779 56551233 -83765532 - L1MA5 LINE L1 -10 6290 5820 3625 198 21 18 chr10 56551236 56552364 -83764401 - L1MA5 LINE L1 -617 5683 4559 23 68 0 0 chr10 56552425 56552469 -83764296 + AT_rich Low_complexity Low_complexity 1 44 0 315 346 15 8 chr10 56552991 56553121 -83763644 + L2 LINE L2 3175 3305 -8 4824 135 61 13 chr10 56553267 56553984 -83762781 + L1PA15 LINE L1 5191 5962 -203 1848 144 146 8 chr10 56553984 56554360 -83762405 - MSTA LTR MaLR 0 428 1 4824 135 61 13 chr10 56554360 56554570 -83762195 + L1PA15 LINE L1 5962 6160 -5 31 0 0 0 chr10 56554704 56554735 -83762030 + AT_rich Low_complexity Low_complexity 1 31 0 2535 71 0 0 chr10 56555207 56555516 -83761249 - AluSc SINE Alu 0 309 1 1377 177 22 35 chr10 56555758 56556074 -83760691 + AluJb SINE Alu 1 312 0 1947 141 3 0 chr10 56557338 56557662 -83759103 + AluSx SINE Alu 1 312 0 23 33 0 0 chr10 56558869 56558899 -83757866 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 56559518 56559540 -83757225 + AT_rich Low_complexity Low_complexity 1 22 0 376 123 62 0 chr10 56560374 56560439 -83756326 - L1P LINE L1 -3934 2212 2144 2056 192 26 5 chr10 56561300 56561717 -83755048 + MSTB LTR MaLR 1 426 0 243 203 34 0 chr10 56561717 56561776 -83754989 + MSTB-int LTR MaLR 1 61 -1590 * 12701 168 92 96 chr10 56561766 56565321 -83751444 + L1P LINE L1 2 3541 -2605 768 174 0 8 chr10 56565329 56565461 -83751304 - FLAM_C SINE Alu 0 133 3 1921 202 78 2 chr10 56565950 56566346 -83750419 - MSTB LTR MaLR 0 426 1 8085 199 38 8 chr10 56566347 56567919 -83748846 - MSTB-int LTR MaLR -1 1650 34 10367 115 1 18 chr10 56567943 56570387 -83746378 - L1PA8 LINE L1 0 6172 3776 216 271 68 17 chr10 56571641 56571700 -83745065 - MER91A DNA MER1_type -8 188 127 322 302 31 31 chr10 56571728 56571824 -83744941 - MER91A DNA MER1_type -51 145 50 2439 251 27 12 chr10 56573324 56573921 -83742844 + MER90 LTR ERV1 9 614 0 219 36 0 0 chr10 56573975 56574003 -83742762 + (TG)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr10 56574002 56574028 -83742737 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 1995 186 49 17 chr10 56574060 56574469 -83742296 + MSTB LTR MaLR 2 423 -3 231 250 0 0 chr10 56574553 56574605 -83742160 + LTR30 LTR ERV1 1 52 -670 2269 104 159 143 chr10 56574609 56575275 -83741490 + LTR12 LTR ERV1 57 590 -124 487 257 0 0 chr10 56575728 56575837 -83740928 - L1P LINE L1 -1519 4627 4519 257 214 107 24 chr10 56576185 56576269 -83740496 - MIR SINE MIR -58 204 114 2218 153 0 8 chr10 56576674 56577040 -83739725 - L1PB4 LINE L1 -2 6154 5792 8149 241 45 16 chr10 56577049 56578016 -83738749 - L1 LINE L1 -1467 5381 4443 354 23 0 0 chr10 56578016 56578059 -83738706 + (TG)n Simple_repeat Simple_repeat 1 43 0 8149 241 45 16 chr10 56578059 56579531 -83737234 - L1 LINE L1 -2405 4443 2872 2536 222 25 120 chr10 56579546 56580722 -83736043 - L1PA15-16 LINE L1 -4523 2326 1263 628 305 38 28 chr10 56580998 56581316 -83735449 - L1PA15-16 LINE L1 -5831 1019 699 426 370 92 27 chr10 56581729 56582024 -83734741 - L1 LINE L1 -6526 323 10 183 80 0 0 chr10 56582653 56582678 -83734087 + (ATG)n Simple_repeat Simple_repeat 3 27 0 225 94 0 0 chr10 56584848 56584880 -83731885 + (CA)n Simple_repeat Simple_repeat 2 33 0 305 251 147 52 chr10 56585501 56585752 -83731013 + L1M4 LINE L1 3495 3769 -2377 204 97 0 0 chr10 56586754 56586785 -83729980 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 274 62 97 chr10 56586938 56587051 -83729714 + L2 LINE L2 3164 3272 0 22 0 0 0 chr10 56587081 56587103 -83729662 + AT_rich Low_complexity Low_complexity 1 22 0 216 365 70 9 chr10 56587266 56587381 -83729384 - MER5A DNA MER1_type -3 186 65 12863 118 6 31 chr10 56589158 56592215 -83724550 + L1PA16 LINE L1 3 3050 -3411 5777 62 11 3 chr10 56592215 56592967 -83723798 + L1PA7 LINE L1 5396 6153 -1 4354 137 7 1 chr10 56593440 56594118 -83722647 + L1PA16 LINE L1 5787 6468 -13 2166 209 34 8 chr10 56594337 56594815 -83721950 - L1 LINE L1 -3433 2713 2224 * 2983 172 33 51 chr10 56594785 56595509 -83721256 + L1M2 LINE L1 4743 5451 -743 627 289 109 46 chr10 56595929 56596213 -83720552 - MLT1E LTR MaLR -13 580 279 188 132 0 26 chr10 56596314 56596352 -83720413 + (TC)n Simple_repeat Simple_repeat 2 38 0 625 218 32 32 chr10 56596418 56596574 -83720191 - MLT1E LTR MaLR -427 166 11 491 176 0 0 chr10 56596943 56597034 -83719731 - L1PA16 LINE L1 -15 6151 6061 25 51 0 0 chr10 56598309 56598348 -83718417 + AT_rich Low_complexity Low_complexity 1 39 0 2032 83 0 73 chr10 56599382 56599708 -83717057 - AluY SINE Alu 0 304 1 22 0 0 0 chr10 56599800 56599822 -83716943 + AT_rich Low_complexity Low_complexity 1 22 0 198 348 33 11 chr10 56600291 56600383 -83716382 - MIR SINE MIR -62 146 53 205 336 96 16 chr10 56601519 56601644 -83715121 + MIR SINE MIR 22 156 -106 22 0 0 0 chr10 56601846 56601868 -83714897 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 56601879 56601908 -83714857 + AT_rich Low_complexity Low_complexity 1 29 0 252 311 67 34 chr10 56603713 56603832 -83712933 - MIR SINE MIR -1 207 84 460 281 120 36 chr10 56604228 56604587 -83712178 + MER20B DNA MER1_type 64 452 -331 1444 159 171 31 chr10 56604587 56604747 -83712018 + THE1C LTR MaLR 1 137 -238 306 0 0 0 chr10 56604747 56604781 -83711984 + (TC)n Simple_repeat Simple_repeat 1 34 0 1444 159 171 31 chr10 56604781 56604947 -83711818 + THE1C LTR MaLR 137 373 -2 8647 158 32 38 chr10 56604950 56606537 -83710228 + THE1C-int LTR MaLR 3 1580 0 1559 167 78 36 chr10 56606537 56606897 -83709868 + THE1C LTR MaLR 1 375 0 309 278 6 75 chr10 56607008 56607181 -83709584 + MER20B DNA MER1_type 611 771 -12 42188 37 22 4 chr10 56607447 56613489 -83703276 - L1PA3 LINE L1 -4 6151 3 2152 217 38 26 chr10 56613610 56614293 -83702472 - MER45R DNA AcHobo -1 1580 890 499 267 9 0 chr10 56614358 56614474 -83702291 - MER45R DNA AcHobo -1373 208 92 2388 119 6 3 chr10 56614477 56614831 -83701934 + THE1A LTR MaLR 1 355 0 10233 111 7 70 chr10 56614831 56616517 -83700248 + THE1A-int LTR MaLR 1 1580 0 2067 113 89 0 chr10 56616517 56616843 -83699922 + THE1A LTR MaLR 1 355 0 237 313 24 48 chr10 56616844 56616927 -83699838 - MER45 DNA AcHobo -959 81 1 1156 129 5 15 chr10 56616941 56617143 -83699622 - L1MA9 LINE L1 -32 6280 6081 206 174 0 22 chr10 56617279 56617325 -83699440 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1617 74 0 0 chr10 56618556 56618759 -83698006 - THE1A LTR MaLR -152 203 1 294 261 77 107 chr10 56618798 56619135 -83697630 + MLT1J LTR MaLR 113 439 -72 24 32 0 0 chr10 56619707 56619738 -83697027 + AT_rich Low_complexity Low_complexity 1 31 0 189 171 0 0 chr10 56619792 56619827 -83696938 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 24 53 0 0 chr10 56620136 56620174 -83696591 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr10 56620614 56620649 -83696116 + AT_rich Low_complexity Low_complexity 1 35 0 2292 70 0 10 chr10 56622074 56622373 -83694392 - AluY SINE Alu -14 297 2 2159 118 0 13 chr10 56622563 56622867 -83693898 - AluSg SINE Alu -10 300 1 21 0 0 0 chr10 56623084 56623105 -83693660 + AT_rich Low_complexity Low_complexity 1 21 0 2131 103 3 0 chr10 56623107 56623389 -83693376 + AluSg SINE Alu 1 283 -27 524 194 28 0 chr10 56623405 56623513 -83693252 - FLAM_C SINE Alu -19 124 14 212 211 35 0 chr10 56623661 56623718 -83693047 + GA-rich Low_complexity Low_complexity 2 60 0 2667 254 67 12 chr10 56623932 56624759 -83692006 - MER63C DNA MER1_type -4 926 55 22 0 0 0 chr10 56624910 56624932 -83691833 + AT_rich Low_complexity Low_complexity 1 22 0 402 57 0 0 chr10 56625884 56625937 -83690828 + (CA)n Simple_repeat Simple_repeat 1 53 0 242 284 12 25 chr10 56625984 56626065 -83690700 + MER103 DNA DNA 4 83 -83 224 302 0 0 chr10 56626477 56626530 -83690235 + (CATA)n Simple_repeat Simple_repeat 3 55 0 295 200 40 13 chr10 56626775 56626850 -83689915 - Charlie8 DNA MER1_type -1926 491 415 198 0 0 0 chr10 56626857 56626879 -83689886 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 525 151 67 34 chr10 56626883 56627002 -83689763 + MLT-int LTR MaLR 1572 1694 -41 1315 118 0 0 chr10 56627009 56627187 -83689578 - AluSq SINE Alu -72 241 64 3401 91 4 0 chr10 56627429 56627880 -83688885 + MLT2A2 LTR ERVL 1 453 0 197 282 118 12 chr10 56628323 56628408 -83688357 - MIR SINE MIR -1 261 168 364 267 164 68 chr10 56629149 56629460 -83687305 + MLT1H LTR MaLR 209 549 0 321 26 0 0 chr10 56631749 56631787 -83684978 + (TG)n Simple_repeat Simple_repeat 1 38 0 1511 250 93 62 chr10 56631808 56632088 -83684677 + L1ME3A LINE L1 5338 5608 -562 912 28 49 7 chr10 56632088 56632231 -83684534 + (TAGA)n Simple_repeat Simple_repeat 3 151 0 1511 250 93 62 chr10 56632231 56632758 -83684007 + L1ME3A LINE L1 5608 6170 0 226 342 26 18 chr10 56633471 56633585 -83683180 + Charlie8 DNA MER1_type 129 243 -2174 652 149 58 0 chr10 56633585 56633706 -83683059 + L1MA7 LINE L1 6125 6252 -39 22 80 0 0 chr10 56633865 56633915 -83682850 + AT_rich Low_complexity Low_complexity 1 50 0 2636 16 3 3 chr10 56635010 56635314 -83681451 - AluYb8 SINE Alu -14 304 1 2127 132 0 0 chr10 56636179 56636482 -83680283 - AluSx SINE Alu -9 303 1 670 226 72 67 chr10 56637581 56637789 -83678976 - MER20B DNA MER1_type -9 210 2 1521 171 51 41 chr10 56637926 56638218 -83678547 + AluJo SINE Alu 1 295 -17 629 259 118 21 chr10 56638586 56638918 -83677847 - L1MEc LINE L1 -4042 2354 1991 309 309 105 26 chr10 56639024 56639215 -83677550 + L1MDa LINE L1 1764 1969 -4571 525 257 142 23 chr10 56639224 56639527 -83677238 + L1MDa LINE L1 1963 2301 -4420 969 276 56 36 chr10 56639543 56640088 -83676677 + MLT2F LTR ERVL 2 595 -68 189 213 0 0 chr10 56640131 56640178 -83676587 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 280 298 54 7 chr10 56640708 56640855 -83675910 - MIR3 SINE MIR -71 137 2 2340 107 0 0 chr10 56641465 56641775 -83674990 - AluSx SINE Alu -2 310 1 249 356 59 0 chr10 56642411 56642546 -83674219 - MIR SINE MIR -73 189 47 1452 197 3 36 chr10 56642554 56642858 -83673907 + AluJo SINE Alu 6 299 -13 22 35 0 0 chr10 56643641 56643670 -83673095 + AT_rich Low_complexity Low_complexity 1 29 0 1430 193 9 37 chr10 56644256 56644577 -83672188 + AluJo SINE Alu 1 312 0 1004 182 93 108 chr10 56644749 56645204 -83671561 + LTR28 LTR ERV1 10 577 -443 4027 138 6 8 chr10 56645331 56646000 -83670765 - L1PA10 LINE L1 -115 6053 5386 2926 251 36 10 chr10 56645997 56646948 -83669817 - L1 LINE L1 -2962 4205 3229 * 249 196 0 0 chr10 56646948 56646999 -83669766 + (TA)n Simple_repeat Simple_repeat 1 51 0 348 106 0 0 chr10 56646999 56647046 -83669719 - L1P4 LINE L1 -575 5593 5547 * 6218 272 66 24 chr10 56647030 56650419 -83666346 - L1 LINE L1 -3950 3217 2 23 33 0 0 chr10 56650877 56650907 -83665858 + AT_rich Low_complexity Low_complexity 1 30 0 503 244 24 8 chr10 56651029 56651152 -83665613 - MER3 DNA MER1_type -84 125 1 493 325 125 60 chr10 56651163 56651914 -83664851 - L3 LINE CR1 -285 1292 493 227 240 0 0 chr10 56652329 56652379 -83664386 + (TG)n Simple_repeat Simple_repeat 1 50 0 313 291 97 15 chr10 56652462 56652495 -83664270 - L1MD2 LINE L1 -176 6183 6154 243 0 0 0 chr10 56652495 56652522 -83664243 + (TG)n Simple_repeat Simple_repeat 1 27 0 313 291 97 15 chr10 56652522 56652622 -83664143 - L1MD2 LINE L1 -205 6154 6039 21 36 0 0 chr10 56654661 56654689 -83662076 + AT_rich Low_complexity Low_complexity 1 28 0 1335 124 0 5 chr10 56654989 56655198 -83661567 + L1PB1 LINE L1 5942 6149 -2 1533 146 20 156 chr10 56656228 56656727 -83660038 - L1MC3 LINE L1 -8 7777 7347 514 276 131 4 chr10 56656727 56657002 -83659763 - L1M4 LINE L1 -873 5273 4964 376 143 37 12 chr10 56657010 56657171 -83659594 + (TA)n Simple_repeat Simple_repeat 2 166 0 1016 157 21 0 chr10 56657195 56657386 -83659379 - L1MA5 LINE L1 -2 6298 6104 1102 201 47 10 chr10 56657386 56657480 -83659285 - L1M4 LINE L1 -1206 4940 4851 6028 171 24 24 chr10 56657480 56658711 -83658054 + Tigger3b DNA MER2_type 1 1231 0 1102 201 47 10 chr10 56658711 56658915 -83657850 - L1M4 LINE L1 -1295 4851 4631 724 284 32 11 chr10 56658924 56659209 -83657556 - L1MCa LINE L1 -3245 3181 2891 785 285 66 11 chr10 56659230 56659504 -83657261 - L1MCa LINE L1 -5832 594 306 539 260 80 10 chr10 56659545 56659745 -83657020 - L1MCa LINE L1 -6202 224 11 207 0 0 0 chr10 56659901 56659924 -83656841 + (CA)n Simple_repeat Simple_repeat 2 24 0 34 55 0 0 chr10 56660180 56660235 -83656530 + AT_rich Low_complexity Low_complexity 1 55 0 243 349 36 48 chr10 56660304 56660470 -83656295 + MIR SINE MIR 99 262 0 195 377 28 9 chr10 56660476 56660582 -83656183 + L3b LINE CR1 1340 1447 -136 2125 110 14 0 chr10 56660746 56661038 -83655727 + AluSq SINE Alu 1 296 -17 181 191 32 0 chr10 56662016 56662070 -83654695 + (TA)n Simple_repeat Simple_repeat 1 59 -6 548 101 0 0 chr10 56662070 56662149 -83654616 - MADE1 DNA Mariner 0 80 2 181 191 32 0 chr10 56662149 56662157 -83654608 + (TA)n Simple_repeat Simple_repeat 59 65 0 26 30 0 0 chr10 56662518 56662551 -83654214 + AT_rich Low_complexity Low_complexity 1 33 0 261 192 55 0 chr10 56662692 56662765 -83654000 + AluJ/FRAM SINE Alu 226 302 0 24 0 0 0 chr10 56662798 56662822 -83653943 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr10 56663044 56663075 -83653690 + AT_rich Low_complexity Low_complexity 1 31 0 895 115 64 6 chr10 56663097 56663254 -83653511 - L1MA3 LINE L1 -108 6197 6032 2831 157 48 11 chr10 56663649 56664173 -83652592 + Tigger3(Golem) DNA MER2_type 2486 3028 -1 361 228 50 0 chr10 56664177 56664278 -83652487 - L1M4 LINE L1 -1312 4834 4729 * 4093 193 23 16 chr10 56664271 56665152 -83651613 + L1MB3 LINE L1 5255 6141 -42 44 46 0 0 chr10 56665164 56665229 -83651536 + AT_rich Low_complexity Low_complexity 1 65 0 649 232 48 99 chr10 56665290 56665790 -83650975 + L1MCa LINE L1 836 1360 -5066 2263 60 7 27 chr10 56665790 56666091 -83650674 + AluY SINE Alu 1 295 -16 333 68 0 0 chr10 56666091 56666135 -83650630 + (TA)n Simple_repeat Simple_repeat 2 45 0 649 232 48 99 chr10 56666135 56666240 -83650525 + L1MCa LINE L1 1358 1411 -5015 233 167 19 0 chr10 56666255 56666309 -83650456 + CT-rich Low_complexity Low_complexity 1 55 0 462 309 89 37 chr10 56666321 56666785 -83649980 + L1MCa LINE L1 1608 2127 -4480 2228 117 0 0 chr10 56666785 56667083 -83649682 + AluSg SINE Alu 1 298 -12 462 309 89 37 chr10 56667083 56667372 -83649393 + L1MCa LINE L1 2127 2400 -4207 276 231 0 0 chr10 56667423 56667465 -83649300 - MLT2C2 LTR ERVL 0 464 420 204 40 0 0 chr10 56667465 56667490 -83649275 + (CA)n Simple_repeat Simple_repeat 2 26 0 276 231 0 0 chr10 56667490 56667512 -83649253 - MLT2C2 LTR ERVL -43 421 400 * 331 303 34 0 chr10 56667491 56667580 -83649185 - MLT2B1 LTR ERVL -289 231 140 1220 259 70 50 chr10 56667650 56667787 -83648978 + L1MCa LINE L1 2435 2568 -3858 611 232 0 0 chr10 56667787 56667912 -83648853 + FLAM_A SINE Alu 5 129 -4 1220 259 70 50 chr10 56667912 56667995 -83648770 + L1MCa LINE L1 2568 2648 -3778 2222 84 0 3 chr10 56667995 56668282 -83648483 + AluY SINE Alu 1 286 -25 1220 259 70 50 chr10 56668282 56669184 -83647581 + L1MCa LINE L1 2648 3639 -2787 7970 231 30 12 chr10 56669399 56671631 -83645134 - L1P LINE L1 -1015 5131 2859 2328 95 3 3 chr10 56671722 56672018 -83644747 + AluY SINE Alu 1 296 -15 437 253 316 0 chr10 56672729 56672887 -83643878 + MIR SINE MIR 40 247 -15 1086 156 0 22 chr10 56673017 56673197 -83643568 + AluSx SINE Alu 1 176 -136 269 288 35 18 chr10 56673556 56673726 -83643039 + CT-rich Low_complexity Low_complexity 2 174 0 22 35 0 0 chr10 56673895 56673924 -83642841 + GC_rich Low_complexity Low_complexity 1 29 0 251 286 79 0 chr10 56674218 56674281 -83642484 - L2 LINE L2 -2 3270 3203 4643 101 0 16 chr10 56674992 56675685 -83641080 + HERV9 LTR ERV1 765 1446 -6953 1577 132 7 15 chr10 56675684 56676126 -83640639 - pTR5 LTR ERV1 -1992 446 1 * 1107 89 13 0 chr10 56677122 56677279 -83639486 - AluY SINE Alu -13 298 140 425 245 143 46 chr10 56678735 56678972 -83637793 - MIR SINE MIR 0 262 3 1396 107 107 20 chr10 56679287 56679531 -83637234 + MER2 DNA MER2_type 1 265 -80 735 153 14 35 chr10 56679531 56679675 -83637090 - FLAM_A SINE Alu -1 141 1 526 121 11 44 chr10 56679679 56679770 -83636995 + MER2 DNA MER2_type 258 345 0 388 169 55 16 chr10 56680052 56680135 -83636630 - MER5A DNA MER1_type -1 188 93 258 306 222 6 chr10 56680405 56680585 -83636180 + MIR SINE MIR 10 228 -34 420 271 8 42 chr10 56680936 56681054 -83635711 - MIR3 SINE MIR -14 194 81 255 103 0 0 chr10 56681503 56681542 -83635223 + (TCTCCC)n Simple_repeat Simple_repeat 5 43 0 289 316 23 17 chr10 56681544 56681718 -83635047 + CT-rich Low_complexity Low_complexity 3 177 0 * 304 325 6 18 chr10 56681635 56681804 -83634961 + T-rich Low_complexity Low_complexity 3 169 0 924 167 47 84 chr10 56681905 56682459 -83634306 - L1MCb LINE L1 -4848 1716 1076 219 36 0 0 chr10 56682461 56682489 -83634276 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 848 108 0 8 chr10 56682489 56682609 -83634156 - FLAM_C SINE Alu -24 119 1 427 250 45 32 chr10 56682760 56682916 -83633849 + MIR3 SINE MIR 2 159 -49 3553 111 26 7 chr10 56683117 56683660 -83633105 - LTR9B LTR ERV1 -91 553 1 2849 112 13 9 chr10 56683660 56684107 -83632658 - HUERS-P3 LTR ERV1 0 8919 8471 26 30 0 0 chr10 56684745 56684778 -83631987 + AT_rich Low_complexity Low_complexity 1 33 0 1137 179 19 41 chr10 56685370 56685638 -83631127 + MLT1B LTR MaLR 129 390 0 2018 96 28 3 chr10 56685791 56686073 -83630692 - AluY SINE Alu -22 289 1 432 289 70 118 chr10 56686115 56686685 -83630080 + L2 LINE L2 1699 2241 -1073 424 206 26 58 chr10 56686689 56686844 -83629921 - L1MC5 LINE L1 -212 7749 7600 283 341 7 51 chr10 56686871 56687009 -83629756 + L2 LINE L2 2699 2830 -484 405 268 163 19 chr10 56687149 56687358 -83629407 - L2 LINE L2 -357 2957 2719 261 330 9 28 chr10 56688080 56688189 -83628576 + MIR SINE MIR 28 134 -74 741 260 117 15 chr10 56689013 56689425 -83627340 - L1 LINE L1 -2055 4091 3638 577 224 62 6 chr10 56689466 56689645 -83627120 + MER96B DNA MER1_type? 13 201 -216 295 248 127 43 chr10 56689821 56690120 -83626645 - HAL1b LINE L1 -237 1111 788 648 285 105 14 chr10 56690141 56690580 -83626185 + L1ME4a LINE L1 5484 5962 -159 10456 39 1 13 chr10 56691209 56692639 -83624126 - L1P LINE L1 -1995 4151 2739 2471 26 0 0 chr10 56692638 56692941 -83623824 + L1P LINE L1 4481 4783 -1363 * 671 212 7 13 chr10 56693486 56693637 -83623128 - MLT1I LTR MaLR -2 407 258 1442 112 70 0 chr10 56693659 56693874 -83622891 + MER30 DNA MER1_type 1 230 0 1303 191 65 22 chr10 56693923 56694332 -83622433 + LTR48 LTR ERV1 261 787 0 273 287 0 19 chr10 56694531 56694639 -83622126 + CT-rich Low_complexity Low_complexity 2 107 0 2376 155 10 2 chr10 56694739 56695140 -83621625 - HERV9 LTR ERV1 -7995 404 1 3973 91 255 1 chr10 56695140 56695799 -83620966 - LTR12 LTR ERV1 0 826 1 2332 128 34 12 chr10 56696152 56696567 -83620198 + L1MA8 LINE L1 5858 6281 -10 2188 77 28 3 chr10 56696575 56696861 -83619904 - AluSq SINE Alu -20 293 1 771 106 0 32 chr10 56697338 56697461 -83619304 - FLAM_A SINE Alu -3 139 21 210 93 56 56 chr10 56699530 56699584 -83617181 + A-rich Low_complexity Low_complexity 2 55 0 2064 119 3 3 chr10 56699606 56699899 -83616866 + AluSq SINE Alu 4 296 -17 203 253 177 0 chr10 56700829 56700908 -83615857 - L2 LINE L2 0 3272 3180 305 129 0 17 chr10 56701150 56701214 -83615551 + AluJ/FRAM SINE Alu 231 274 -28 368 268 88 58 chr10 56701278 56701483 -83615282 - L2 LINE L2 -1 3312 3102 224 98 0 24 chr10 56702119 56702160 -83614605 + (GA)n Simple_repeat Simple_repeat 2 41 0 231 311 184 35 chr10 56702195 56702423 -83614342 + MIR SINE MIR 1 262 0 4065 209 28 2 chr10 56702677 56703880 -83612885 + L1PB4 LINE L1 4925 6156 0 1932 124 51 0 chr10 56705492 56705766 -83610999 + AluSq SINE Alu 1 288 -25 327 296 30 0 chr10 56706388 56706520 -83610245 - L1ME2 LINE L1 -2 6162 6027 341 212 133 9 chr10 56706529 56706642 -83610123 - L1M4 LINE L1 -851 5295 5169 1490 190 7 0 chr10 56706856 56707125 -83609640 - L1MC1 LINE L1 -15 6318 6048 324 0 0 0 chr10 56707125 56707161 -83609604 + (TA)n Simple_repeat Simple_repeat 1 36 0 216 0 0 0 chr10 56707160 56707184 -83609581 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 240 260 0 0 chr10 56707184 56707257 -83609508 + L1MC4 LINE L1 6628 6700 -1342 808 201 6 0 chr10 56707257 56707431 -83609334 - L1MC1 LINE L1 -290 6043 5869 250 235 0 0 chr10 56707430 56707481 -83609284 - L1MCa LINE L1 -5801 625 575 * 246 195 0 0 chr10 56707487 56707528 -83609237 - L1MCa LINE L1 -5812 614 574 2033 223 60 26 chr10 56707550 56708116 -83608649 - L1MCa LINE L1 -5841 585 1 23 33 0 0 chr10 56708131 56708161 -83608604 + AT_rich Low_complexity Low_complexity 1 30 0 538 303 75 27 chr10 56708212 56708506 -83608259 - L1M4 LINE L1 -1157 4989 4682 606 277 40 36 chr10 56708592 56709064 -83607701 - L1M4 LINE L1 -1594 4552 4096 243 282 24 35 chr10 56709171 56709256 -83607509 - MIR SINE MIR -66 142 59 480 268 16 11 chr10 56709653 56709843 -83606922 - L1MDa LINE L1 -5325 1215 1025 553 167 53 8 chr10 56710059 56710191 -83606574 + AluSp/q SINE Alu 176 313 0 801 89 5 63 chr10 56710200 56710390 -83606375 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 207 0 0 0 chr10 56710625 56710648 -83606117 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 357 321 115 38 chr10 56711084 56711502 -83605263 + L1MD2 LINE L1 1579 2028 -4368 * 5351 35 7 0 chr10 56711487 56712169 -83604596 - L1P LINE L1 -1498 4648 3962 442 251 36 86 chr10 56712169 56712524 -83604241 + L1MD2 LINE L1 2035 2317 -3900 389 257 14 0 chr10 56712605 56712753 -83604012 + L1MD2 LINE L1 2333 2482 -3733 236 254 27 45 chr10 56712925 56713035 -83603730 + L1MD2 LINE L1 5323 5430 -805 798 254 50 15 chr10 56713082 56713420 -83603345 + L1ME LINE L1 5295 5644 -520 39471 38 22 1 chr10 56713787 56719707 -83597058 + L1PA2 LINE L1 96 6176 0 307 0 0 0 chr10 56719707 56719741 -83597024 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 29 47 0 0 chr10 56720076 56720119 -83596646 + AT_rich Low_complexity Low_complexity 1 43 0 655 130 48 31 chr10 56720435 56720725 -83596040 + (TA)n Simple_repeat Simple_repeat 1 295 0 896 235 98 18 chr10 56722584 56722782 -83593983 + L1MD2 LINE L1 5398 5627 -801 1832 185 6 104 chr10 56722782 56723253 -83593512 + MER61B LTR ERV1 1 425 0 896 235 98 18 chr10 56723253 56723339 -83593426 + L1MD2 LINE L1 5627 5705 -723 4828 149 20 34 chr10 56723351 56724350 -83592415 - L1PA16 LINE L1 -13 6153 5152 2356 129 3 21 chr10 56724350 56724730 -83592035 + THE1C LTR MaLR 3 375 0 4828 149 20 34 chr10 56724730 56725124 -83591641 - L1PA16 LINE L1 -1014 5152 4754 1742 238 7 2 chr10 56725227 56725659 -83591106 - L1 LINE L1 -1591 4555 4122 2149 240 51 33 chr10 56725666 56726354 -83590411 + L1MD2 LINE L1 5707 6406 -22 707 308 88 71 chr10 56726364 56727575 -83589190 + HAL1 LINE L1 1276 2507 0 266 322 14 7 chr10 56727606 56727749 -83589016 + (TA)n Simple_repeat Simple_repeat 2 145 0 252 271 59 51 chr10 56728701 56728819 -83587946 + L1MEc LINE L1 271 389 -6007 347 375 28 36 chr10 56728918 56729169 -83587596 + L1MEc LINE L1 503 751 -5645 1787 253 110 58 chr10 56729411 56731085 -83585680 + L1MEc LINE L1 1700 3426 -2789 247 256 101 31 chr10 56731213 56731342 -83585423 + L1MEc LINE L1 3579 3716 -2499 37 23 0 0 chr10 56731350 56731394 -83585371 + AT_rich Low_complexity Low_complexity 1 44 0 688 107 18 36 chr10 56732714 56732826 -83583939 + MER72 LTR ERV1 585 694 -28 321 319 9 9 chr10 56733343 56733456 -83583309 + MIR SINE MIR 33 145 -63 10590 228 19 15 chr10 56733760 56737361 -83579404 - L1PA16 LINE L1 -139 6678 3093 2397 91 33 28 chr10 56737361 56737723 -83579042 + THE1B LTR MaLR 1 364 0 10590 228 19 15 chr10 56737723 56737786 -83578979 - L1PA16 LINE L1 -3724 3093 3032 6599 46 4 2 chr10 56737786 56738608 -83578157 + L1PA5 LINE L1 5330 6152 -2 10590 228 19 15 chr10 56738608 56738669 -83578096 - L1PA16 LINE L1 -3785 3032 2936 3883 285 50 32 chr10 56738747 56740737 -83576028 - L1PA16 LINE L1 -4372 2425 215 420 303 0 0 chr10 56740738 56740847 -83575918 - L1PA16 LINE L1 -6678 109 1 230 247 27 27 chr10 56741480 56741553 -83575212 - MLT1J2 LTR MaLR -45 405 333 486 133 0 76 chr10 56741916 56742021 -83574744 + L1MA3 LINE L1 6208 6304 -1 1806 159 13 3 chr10 56742040 56742349 -83574416 + AluSx SINE Alu 1 312 0 256 253 48 24 chr10 56743014 56743097 -83573668 - LTR16C LTR ERVL -92 399 315 248 149 0 119 chr10 56743085 56743152 -83573613 + MLT1J LTR MaLR 451 509 -2 * 247 216 0 0 chr10 56743192 56743243 -83573522 - MIR SINE MIR -11 251 201 2583 176 40 8 chr10 56743678 56744149 -83572616 + MER66B LTR ERV1 1 486 0 724 210 28 0 chr10 56744210 56744353 -83572412 - MER58B DNA MER1_type -1 340 194 358 314 21 14 chr10 56744381 56744521 -83572244 - MIR SINE MIR -111 151 11 194 376 160 6 chr10 56744854 56745197 -83571568 - L3 LINE CR1 -547 1030 635 228 280 21 54 chr10 56746229 56746322 -83570443 - L1ME LINE L1 -302 5819 5730 21 0 0 0 chr10 56746379 56746400 -83570365 + AT_rich Low_complexity Low_complexity 1 21 0 189 286 14 121 chr10 56747468 56747608 -83569157 - L2 LINE L2 -7 3306 3182 189 171 0 0 chr10 56747964 56747999 -83568766 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 655 172 159 0 chr10 56748137 56748294 -83568471 + Tigger7 DNA MER2_type 487 668 -1819 848 167 0 0 chr10 56748310 56748442 -83568323 + Tigger7 DNA MER2_type 2355 2486 -1 212 166 73 13 chr10 56748513 56748664 -83568101 + (TA)n Simple_repeat Simple_repeat 2 161 0 278 313 87 26 chr10 56749062 56749177 -83567588 - L2 LINE L2 -15 3298 3177 624 307 75 19 chr10 56750479 56750746 -83566019 - MLT1C LTR MaLR 0 467 186 25 0 0 0 chr10 56754080 56754105 -83562660 + AT_rich Low_complexity Low_complexity 1 25 0 380 283 16 48 chr10 56754290 56754477 -83562288 - MLT1H1 LTR MaLR -42 513 333 21 36 0 0 chr10 56755291 56755319 -83561446 + AT_rich Low_complexity Low_complexity 1 28 0 1276 256 95 48 chr10 56755501 56756080 -83560685 + L1MC4 LINE L1 3395 3945 -2221 204 40 0 0 chr10 56756080 56756105 -83560660 + (CA)n Simple_repeat Simple_repeat 2 26 0 1276 256 95 48 chr10 56756105 56757390 -83559375 + L1MC4 LINE L1 3945 6147 -19 853 30 0 0 chr10 56757482 56757582 -83559183 - L1PA5 LINE L1 -11 6143 6044 191 36 36 0 chr10 56757860 56757888 -83558877 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 969 263 110 38 chr10 56757892 56758576 -83558189 + L1MC4a LINE L1 6241 6967 -1075 2151 152 57 16 chr10 56758596 56758984 -83557781 - MSTA LTR MaLR -24 404 1 266 279 65 39 chr10 56759146 56759300 -83557465 - L2 LINE L2 -4 3309 3152 21 36 0 0 chr10 56760110 56760138 -83556627 + AT_rich Low_complexity Low_complexity 1 28 0 1207 177 5 0 chr10 56761598 56761807 -83554958 - MSTC LTR MaLR 0 428 219 22 0 0 0 chr10 56764556 56764578 -83552187 + AT_rich Low_complexity Low_complexity 1 22 0 384 22 0 0 chr10 56766794 56766839 -83549926 + (TG)n Simple_repeat Simple_repeat 2 46 0 195 42 0 0 chr10 56767725 56767749 -83549016 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2094 107 7 0 chr10 56767764 56768054 -83548711 - AluSg SINE Alu -18 292 1 24 0 0 0 chr10 56768065 56768089 -83548676 + AT_rich Low_complexity Low_complexity 1 24 0 427 232 55 0 chr10 56768113 56768277 -83548488 + (TA)n Simple_repeat Simple_repeat 1 173 0 315 258 0 31 chr10 56768277 56768374 -83548391 - L1MC4 LINE L1 -1337 6705 6612 225 130 43 43 chr10 56768374 56768443 -83548322 + (TATG)n Simple_repeat Simple_repeat 2 70 0 26 45 0 45 chr10 56768583 56768649 -83548116 + AT_rich Low_complexity Low_complexity 1 63 0 484 153 45 6 chr10 56768657 56768814 -83547951 + (TA)n Simple_repeat Simple_repeat 1 163 0 251 28 28 0 chr10 56768814 56768850 -83547915 + (CA)n Simple_repeat Simple_repeat 2 38 0 413 348 73 21 chr10 56768923 56769156 -83547609 + MIR SINE MIR 18 262 0 21 0 0 0 chr10 56769289 56769310 -83547455 + AT_rich Low_complexity Low_complexity 1 21 0 251 77 5 0 chr10 56769313 56769359 -83547406 - L1PA6 LINE L1 0 6154 6107 329 288 50 0 chr10 56769476 56769615 -83547150 + MER117 DNA MER1_type 44 189 -8 1334 203 0 11 chr10 56769682 56769953 -83546812 - L1P LINE L1 -2213 3933 3666 193 388 79 7 chr10 56769982 56770134 -83546631 + L3 LINE CR1 744 906 -671 190 255 0 0 chr10 56770497 56770544 -83546221 + L3 LINE CR1 1338 1384 -193 365 332 50 30 chr10 56770611 56770810 -83545955 + MIR SINE MIR 49 251 -11 2338 96 0 6 chr10 56771132 56771446 -83545319 - AluSp SINE Alu -1 312 1 1704 178 3 3 chr10 56771471 56771764 -83545001 - AluSx SINE Alu -17 295 3 511 99 0 12 chr10 56772143 56772224 -83544541 - L1MA3 LINE L1 -6 6299 6220 23 33 0 0 chr10 56772961 56772991 -83543774 + AT_rich Low_complexity Low_complexity 1 30 0 299 154 31 15 chr10 56773179 56773244 -83543521 + L1PA15 LINE L1 5956 6021 -144 1532 160 160 73 chr10 56773247 56773615 -83543150 - MER4A LTR ERV1 0 664 265 506 192 0 10 chr10 56773619 56773718 -83543047 - MER4A LTR ERV1 -566 98 1 563 208 0 39 chr10 56773719 56773849 -83542916 + L1PA15 LINE L1 6039 6163 -2 405 299 7 48 chr10 56773865 56774012 -83542753 + L2 LINE L2 3173 3313 0 2107 134 71 6 chr10 56774037 56774388 -83542377 - THE1C LTR MaLR -1 374 1 553 228 20 7 chr10 56774581 56774730 -83542035 - L1MA10 LINE L1 -4 6330 6180 385 316 8 15 chr10 56775015 56775148 -83541617 - MLT1H LTR MaLR -387 162 31 356 164 0 0 chr10 56775224 56775285 -83541480 + Charlie5 DNA MER1_type 2525 2585 -27 5907 87 55 3 chr10 56775539 56776401 -83540364 - L1PA10 LINE L1 -9 6159 5254 18207 194 27 29 chr10 56776402 56781182 -83535583 - L1P3 LINE L1 -1689 4772 10 2511 204 4 0 chr10 56782147 56782633 -83534132 - L1PA16 LINE L1 -24 6142 5655 * 6858 237 11 11 chr10 56782627 56784418 -83532347 - L1 LINE L1 -756 5390 3599 1511 227 22 6 chr10 56784418 56784735 -83532030 - MSTB LTR MaLR -104 322 1 467 296 19 0 chr10 56785954 56786062 -83530703 + MER81 DNA DNA 4 113 -1 896 229 14 19 chr10 56786848 56787058 -83529707 - MER20 DNA MER1_type -5 214 6 1053 194 46 9 chr10 56787124 56787340 -83529425 + AluJb SINE Alu 1 224 -88 1161 213 102 45 chr10 56788378 56788782 -83527983 - MER31B LTR ERV1 -31 435 9 25 31 0 0 chr10 56789436 56789468 -83527297 + AT_rich Low_complexity Low_complexity 1 32 0 363 23 0 0 chr10 56789508 56789552 -83527213 + (CA)n Simple_repeat Simple_repeat 2 45 0 2227 109 0 0 chr10 56789793 56790086 -83526679 + AluSp SINE Alu 1 293 -20 40 37 0 0 chr10 56790154 56790208 -83526557 + AT_rich Low_complexity Low_complexity 1 54 0 246 349 69 0 chr10 56790304 56790479 -83526286 - L1ME LINE L1 -479 5642 5456 1882 142 40 37 chr10 56790495 56790869 -83525896 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 56790952 56790974 -83525791 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 56791109 56791139 -83525626 + AT_rich Low_complexity Low_complexity 1 30 0 282 330 28 9 chr10 56791275 56791381 -83525384 + MIR3 SINE MIR 75 182 -26 22 0 0 0 chr10 56791810 56791832 -83524933 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 56792440 56792472 -83524293 + AT_rich Low_complexity Low_complexity 1 32 0 1495 219 77 15 chr10 56792538 56792887 -83523878 + MSTD LTR MaLR 1 396 0 180 200 0 0 chr10 56792888 56792933 -83523832 + (CA)n Simple_repeat Simple_repeat 2 46 0 1578 289 95 18 chr10 56793178 56794107 -83522658 + L1MC3 LINE L1 1128 2127 -4413 443 265 75 42 chr10 56794168 56794400 -83522365 + L1MC3 LINE L1 2260 2512 -4028 583 275 106 13 chr10 56794812 56795048 -83521717 + MIR SINE MIR 1 258 -4 256 331 44 44 chr10 56795229 56795365 -83521400 + MIR SINE MIR 15 150 -112 291 122 0 0 chr10 56795391 56795440 -83521325 + (TG)n Simple_repeat Simple_repeat 1 49 0 32 0 0 0 chr10 56795492 56795524 -83521241 + AT_rich Low_complexity Low_complexity 1 32 0 207 204 0 0 chr10 56796075 56796119 -83520646 + (CA)n Simple_repeat Simple_repeat 1 44 0 2617 222 120 17 chr10 56798372 56799019 -83517746 + L1MC3 LINE L1 5025 5604 -936 2460 52 0 10 chr10 56799019 56799329 -83517436 + AluY SINE Alu 1 307 -4 2617 222 120 17 chr10 56799329 56799574 -83517191 + L1MC3 LINE L1 5604 5482 -1058 2628 83 13 5 chr10 56799574 56799947 -83516818 - L1PA8 LINE L1 -6 6166 5791 2617 222 120 17 chr10 56799947 56800285 -83516480 + L1MC3 LINE L1 5481 5783 -757 255 175 0 0 chr10 56800282 56800339 -83516426 + L1MC3 LINE L1 7728 7784 -1 * 1697 56 0 0 chr10 56801459 56801672 -83515093 + L1PA5 LINE L1 5935 6147 -7 24 0 0 0 chr10 56802577 56802601 -83514164 + AT_rich Low_complexity Low_complexity 1 24 0 244 267 104 38 chr10 56803365 56803605 -83513160 - L1ME LINE L1 -209 5912 5657 574 227 23 0 chr10 56803652 56803780 -83512985 + MLT1B LTR MaLR 260 390 0 38 0 0 0 chr10 56804087 56804125 -83512640 + AT_rich Low_complexity Low_complexity 1 38 0 29 60 0 0 chr10 56804542 56804592 -83512173 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr10 56804815 56804844 -83511921 + AT_rich Low_complexity Low_complexity 1 29 0 288 256 45 23 chr10 56805298 56805431 -83511334 + MER103 DNA DNA 12 147 -19 590 89 0 0 chr10 56805457 56805536 -83511229 - MADE1 DNA Mariner -1 79 1 185 377 0 0 chr10 56806415 56806484 -83510281 - MIR SINE MIR -13 249 181 1579 225 23 63 chr10 56806774 56807249 -83509516 + MLT1C LTR MaLR 10 465 -2 5541 93 20 15 chr10 56807418 56807969 -83508796 - L1PA13 LINE L1 0 6163 5605 2138 114 0 10 chr10 56807969 56808277 -83508488 - AluSq SINE Alu -8 305 1 5541 93 20 15 chr10 56808277 56808532 -83508233 - L1PA13 LINE L1 -558 5605 5353 779 241 110 0 chr10 56810296 56810532 -83506233 - L1ME1 LINE L1 -110 6056 5795 25 51 0 0 chr10 56810553 56810592 -83506173 + AT_rich Low_complexity Low_complexity 1 39 0 198 128 0 0 chr10 56812086 56812125 -83504640 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr10 56812658 56812679 -83504086 + AT_rich Low_complexity Low_complexity 1 21 0 6369 194 27 16 chr10 56813552 56814116 -83502649 - L1M1 LINE L1 -743 5403 4847 1475 134 106 4 chr10 56814116 56814362 -83502403 - AluSx SINE Alu -15 297 27 6369 194 27 16 chr10 56814362 56815384 -83501381 - L1M1 LINE L1 -1299 4847 3873 749 175 145 50 chr10 56815520 56815884 -83500881 - MER63 DNA MER1_type -231 829 265 333 143 18 98 chr10 56816046 56816117 -83500648 - MER63 DNA MER1_type -757 173 113 1189 163 179 19 chr10 56816117 56816374 -83500391 - AluSc SINE Alu -1 298 1 333 143 18 98 chr10 56816374 56816414 -83500351 - MER63 DNA MER1_type -817 113 71 988 169 17 6 chr10 56816934 56817111 -83499654 - AluJb SINE Alu -14 298 120 406 52 0 0 chr10 56817113 56817171 -83499594 - AluSc SINE Alu -5 304 247 1017 162 0 12 chr10 56817470 56817637 -83499128 + FRAM SINE Alu 1 165 -1 663 128 9 0 chr10 56818524 56818633 -83498132 + L1PA7 LINE L1 6044 6153 -1 656 291 103 5 chr10 56819041 56819244 -83497521 + MIR SINE MIR 37 259 -3 182 143 20 0 chr10 56819273 56819322 -83497443 + (TA)n Simple_repeat Simple_repeat 1 50 0 21 57 0 0 chr10 56819485 56819520 -83497245 + AT_rich Low_complexity Low_complexity 1 35 0 1158 84 18 0 chr10 56819713 56819879 -83496886 - L1P LINE L1 -850 5296 5128 28 0 0 0 chr10 56820718 56820746 -83496019 + AT_rich Low_complexity Low_complexity 1 28 0 210 248 85 92 chr10 56821256 56821409 -83495356 - L2 LINE L2 -181 3091 2940 754 233 5 53 chr10 56821653 56821842 -83494923 - MLT1C LTR MaLR 0 467 288 331 176 40 14 chr10 56821851 56821925 -83494840 - MLT1C LTR MaLR -384 83 8 1197 237 88 31 chr10 56821929 56822426 -83494339 + MLT1E LTR MaLR 24 591 -2 524 209 98 49 chr10 56822644 56822807 -83493958 - L1ME3A LINE L1 -72 6098 5928 304 318 40 40 chr10 56822818 56823016 -83493749 - AluSg/x SINE Alu -5 297 157 332 311 50 0 chr10 56823159 56823278 -83493487 + MIR SINE MIR 123 247 -15 1639 202 21 0 chr10 56823351 56823638 -83493127 - AluJb SINE Alu -19 293 1 237 159 0 0 chr10 56824133 56824177 -83492588 + T-rich Low_complexity Low_complexity 1 44 0 2786 161 34 17 chr10 56824178 56824712 -83492053 - L1MB4 LINE L1 -37 6143 5601 221 364 109 0 chr10 56825291 56825401 -83491364 - L2 LINE L2 -15 3257 3136 765 201 39 64 chr10 56826045 56826403 -83490362 + L1M3 LINE L1 5331 5679 -655 757 199 29 0 chr10 56826538 56826674 -83490091 + MER20 DNA MER1_type 70 209 -10 308 243 30 118 chr10 56826927 56827096 -83489669 - MIR SINE MIR -30 232 79 303 296 113 25 chr10 56828093 56828252 -83488513 - MIR SINE MIR -62 200 28 549 195 156 0 chr10 56828615 56828769 -83487996 + MER45A DNA AcHobo 1 178 0 248 286 14 14 chr10 56828770 56828840 -83487925 + MIR SINE MIR 77 146 -62 195 278 97 14 chr10 56829369 56829441 -83487324 - L2 LINE L2 -10 3262 3185 257 188 109 47 chr10 56831887 56831951 -83484814 + MIR SINE MIR 117 184 -78 195 219 211 65 chr10 56832365 56832488 -83484277 + MIR3 SINE MIR 9 149 -59 362 208 128 101 chr10 56832725 56832874 -83483891 + MER5A DNA MER1_type 23 186 -3 382 282 175 15 chr10 56833688 56833894 -83482871 - MIR SINE MIR 0 262 24 714 146 16 109 chr10 56833956 56834148 -83482617 + AluSx SINE Alu 1 174 -138 31 0 0 0 chr10 56834300 56834331 -83482434 + AT_rich Low_complexity Low_complexity 1 31 0 767 171 47 0 chr10 56834784 56834913 -83481852 + FRAM SINE Alu 22 156 -20 1994 129 13 10 chr10 56835079 56835389 -83481376 + AluSp SINE Alu 1 311 -2 185 250 50 100 chr10 56835790 56835870 -83480895 + MIR SINE MIR 47 122 -86 1498 158 15 15 chr10 56838557 56838822 -83477943 - AluJo SINE Alu -6 306 42 261 195 24 61 chr10 56839228 56839310 -83477455 + MIR SINE MIR 17 95 -167 400 162 0 0 chr10 56839774 56839842 -83476923 - THE1A-int LTR MaLR -1512 68 1 2564 86 17 3 chr10 56839842 56840192 -83476573 - THE1A LTR MaLR 0 355 1 306 286 98 18 chr10 56841361 56841473 -83475292 - MIR3 SINE MIR -6 202 82 1035 115 0 0 chr10 56842976 56843133 -83473632 + (TG)n Simple_repeat Simple_repeat 2 158 0 798 143 8 8 chr10 56844696 56844829 -83471936 + FLAM_C SINE Alu 1 133 0 603 132 91 0 chr10 56844904 56845025 -83471740 + L1MA9 LINE L1 6179 6310 -2 5561 215 66 4 chr10 56845606 56848215 -83468550 - L1 LINE L1 -2305 4543 1766 24 0 0 0 chr10 56848789 56848813 -83467952 + AT_rich Low_complexity Low_complexity 1 24 0 1971 141 10 7 chr10 56848953 56849259 -83467506 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr10 56850050 56850073 -83466692 + AT_rich Low_complexity Low_complexity 1 23 0 417 220 0 0 chr10 56850163 56850254 -83466511 + L1MB2 LINE L1 6007 6097 -74 1083 149 23 0 chr10 56850546 56850721 -83466044 - MLT1C LTR MaLR -5 462 284 595 242 68 32 chr10 56850926 56851116 -83465649 - HERVL40 LTR ERVL -1969 3561 3365 21 57 0 0 chr10 56851680 56851715 -83465050 + AT_rich Low_complexity Low_complexity 1 35 0 185 344 67 11 chr10 56851804 56851894 -83464871 + MIR SINE MIR 58 152 -110 425 332 115 17 chr10 56852450 56852685 -83464080 - MIR SINE MIR -4 258 1 22 0 0 0 chr10 56852959 56852981 -83463784 + AT_rich Low_complexity Low_complexity 1 22 0 274 329 144 35 chr10 56853520 56853867 -83462898 + L3 LINE CR1 885 1269 -308 25 31 0 0 chr10 56854025 56854057 -83462708 + AT_rich Low_complexity Low_complexity 1 32 0 259 257 0 40 chr10 56854064 56854138 -83462627 - MIR SINE MIR -67 141 71 1874 124 29 63 chr10 56854420 56854768 -83461997 + MER1B DNA MER1_type 2 337 0 23 33 0 0 chr10 56856087 56856117 -83460648 + AT_rich Low_complexity Low_complexity 1 30 0 392 246 136 16 chr10 56856370 56856560 -83460205 + MLT1E3 LTR MaLR 1 266 -388 254 219 12 24 chr10 56859966 56860048 -83456717 + (TATG)n Simple_repeat Simple_repeat 4 84 0 23 0 0 0 chr10 56860960 56860983 -83455782 + AT_rich Low_complexity Low_complexity 1 23 0 310 372 21 14 chr10 56861006 56861151 -83455614 + MIR SINE MIR 15 160 -102 1599 178 70 0 chr10 56861750 56862037 -83454728 + AluSx SINE Alu 5 311 -1 27 0 0 0 chr10 56862037 56862064 -83454701 + AT_rich Low_complexity Low_complexity 1 27 0 2030 130 0 7 chr10 56862836 56863128 -83453637 - AluSx SINE Alu -18 294 5 5703 228 15 23 chr10 56863383 56864889 -83451876 - L1P LINE L1 -2983 3163 1670 3107 197 14 64 chr10 56864889 56865728 -83451037 + L1PA15 LINE L1 4105 4901 -1245 692 127 9 0 chr10 56865758 56865868 -83450897 - L1PA11 LINE L1 -3 6171 6061 5605 123 25 0 chr10 56865873 56867114 -83449651 + L1PA15 LINE L1 4900 6165 0 47 19 0 0 chr10 56867114 56867168 -83449597 + AT_rich Low_complexity Low_complexity 1 54 0 275 314 77 6 chr10 56867816 56867972 -83448793 + MIR SINE MIR 96 262 0 29 47 0 0 chr10 56869430 56869473 -83447292 + AT_rich Low_complexity Low_complexity 1 43 0 1341 240 54 63 chr10 56869526 56869951 -83446814 + MLT1C LTR MaLR 42 462 -5 626 267 14 0 chr10 56870060 56870206 -83446559 - MIR SINE MIR -25 237 90 1551 300 22 14 chr10 56870851 56871355 -83445410 - LTR40a LTR ERVL -8 511 4 837 259 26 90 chr10 56871506 56871896 -83444869 - MLT1A1 LTR MaLR 0 365 1 730 324 25 7 chr10 56871993 56872274 -83444491 + L1MEc LINE L1 38 323 -6073 410 252 0 30 chr10 56872282 56872413 -83444352 + L1MA10 LINE L1 6174 6300 -34 930 180 65 109 chr10 56872487 56872933 -83443832 + MER52A LTR ERV1 666 1232 -523 473 298 38 42 chr10 56872971 56873374 -83443391 + MER52A LTR ERV1 1240 1755 0 23 33 0 0 chr10 56873410 56873440 -83443325 + AT_rich Low_complexity Low_complexity 1 30 0 209 83 28 0 chr10 56873504 56873540 -83443225 + (CA)n Simple_repeat Simple_repeat 2 38 0 1238 195 85 45 chr10 56873540 56873894 -83442871 + MLT1A2 LTR MaLR 5 372 -2 22 0 0 0 chr10 56873919 56873941 -83442824 + AT_rich Low_complexity Low_complexity 1 22 0 385 301 123 31 chr10 56874830 56874993 -83441772 - MER5A DNA MER1_type -1 188 11 306 314 92 32 chr10 56875005 56875190 -83441575 + MIR SINE MIR 13 208 -54 1029 88 41 0 chr10 56876279 56876426 -83440339 - L1P3 LINE L1 -425 5747 5595 371 162 0 27 chr10 56876546 56876620 -83440145 - L1MC1 LINE L1 0 6333 6262 533 293 136 0 chr10 56876666 56876864 -83439901 + L2 LINE L2 579 803 -2511 906 132 25 0 chr10 56876896 56877055 -83439710 - L1MA8 LINE L1 -6 6285 6123 428 276 84 74 chr10 56877055 56877366 -83439399 - MLT1I LTR MaLR -15 394 81 640 306 89 7 chr10 56877383 56877654 -83439111 + L2 LINE L2 1103 1395 -1919 210 330 45 0 chr10 56877717 56877805 -83438960 + L2 LINE L2 1376 1467 -1847 576 291 99 35 chr10 56877810 56878092 -83438673 + L2 LINE L2 2066 2365 -949 1435 296 88 45 chr10 56878259 56879080 -83437685 + L2 LINE L2 2335 3201 -112 382 306 75 15 chr10 56880511 56880645 -83436120 + MIR SINE MIR 4 145 -117 207 0 0 0 chr10 56881225 56881248 -83435517 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1441 202 14 7 chr10 56881660 56881957 -83434808 + AluSx SINE Alu 1 299 -13 204 331 140 37 chr10 56882172 56882308 -83434457 + MIR3 SINE MIR 56 205 -3 2296 221 31 2 chr10 56882831 56883280 -83433485 + MER70A LTR ERVL 1 462 -10 802 330 159 7 chr10 56883350 56883937 -83432828 + L2 LINE L2 2505 3195 -118 183 80 0 0 chr10 56884293 56884318 -83432447 + (ATG)n Simple_repeat Simple_repeat 1 25 0 471 319 99 21 chr10 56885078 56885441 -83431324 + LTR16C LTR ERVL 72 491 0 309 149 0 15 chr10 56885619 56885684 -83431081 - MLT1A1 LTR MaLR 0 383 305 54 56 0 0 chr10 56885685 56885774 -83430991 + AT_rich Low_complexity Low_complexity 1 89 0 438 138 25 50 chr10 56885800 56885880 -83430885 - MLT1A1 LTR MaLR -46 319 252 4245 198 14 29 chr10 56885915 56886779 -83429986 - MLT1A1-int LTR MaLR -884 851 1 1472 239 22 22 chr10 56886779 56887143 -83429622 - MLT1A1 LTR MaLR 0 365 2 398 133 22 78 chr10 56887583 56887673 -83429092 + L1MD2 LINE L1 6258 6342 -17 252 0 0 0 chr10 56887915 56887943 -83428822 + (TA)n Simple_repeat Simple_repeat 2 29 0 216 206 235 0 chr10 56888485 56888553 -83428212 - MIR3 SINE MIR -3 205 122 27 0 0 0 chr10 56888834 56888861 -83427904 + AT_rich Low_complexity Low_complexity 1 27 0 482 320 20 0 chr10 56889102 56889252 -83427513 - MER5A DNA MER1_type -3 186 34 2129 137 22 22 chr10 56889358 56889722 -83427043 - THE1B LTR MaLR 0 364 1 2945 246 43 46 chr10 56889978 56891677 -83425088 - L1M1 LINE L1 -4421 2685 50 * 8460 246 31 31 chr10 56891672 56893597 -83423168 - L1 LINE L1 -985 5397 3473 1404 205 42 10 chr10 56893597 56893885 -83422880 + AluJb SINE Alu 1 297 -15 8460 246 31 31 chr10 56893885 56893909 -83422856 - L1 LINE L1 -2909 3473 3450 3085 130 8 8 chr10 56893909 56894400 -83422365 - L1PB3 LINE L1 -3 6151 5661 8460 246 31 31 chr10 56894400 56895730 -83421035 - L1 LINE L1 -2932 3450 2105 1971 122 3 17 chr10 56895730 56896044 -83420721 + AluSp SINE Alu 1 310 0 8460 246 31 31 chr10 56896044 56896198 -83420567 - L1 LINE L1 -4277 2105 1952 353 264 33 0 chr10 56897233 56897324 -83419441 - MIR3 SINE MIR -2 206 113 258 81 0 0 chr10 56897723 56897760 -83419005 + (TG)n Simple_repeat Simple_repeat 2 38 0 4792 221 26 31 chr10 56898425 56899784 -83416981 + L1MB3 LINE L1 3410 4762 -1384 1370 183 6 60 chr10 56899797 56900114 -83416651 + AluJo SINE Alu 13 312 0 1638 231 47 26 chr10 56900125 56900727 -83416038 + L1MB3 LINE L1 4748 5358 -798 3281 182 99 1 chr10 56900730 56901418 -83415347 + L1MB3 LINE L1 5397 6151 -32 21 57 0 0 chr10 56902212 56902247 -83414518 + AT_rich Low_complexity Low_complexity 1 35 0 534 265 135 23 chr10 56903469 56903714 -83413051 - MLT1J1 LTR MaLR -127 323 54 335 351 70 18 chr10 56904181 56904352 -83412413 + MER5A DNA MER1_type 7 186 -3 25 75 0 0 chr10 56906530 56906583 -83410182 + AT_rich Low_complexity Low_complexity 1 53 0 2221 71 41 0 chr10 56906636 56906930 -83409835 - AluY SINE Alu -1 310 5 192 275 0 0 chr10 56906968 56907008 -83409757 + L2 LINE L2 3224 3263 -9 5021 112 25 10 chr10 56907314 56908083 -83408682 + LTR17 LTR ERV1 1 780 0 198 333 44 35 chr10 56910151 56910265 -83406500 - L2 LINE L2 -3 3310 3196 344 223 161 99 chr10 56910667 56910878 -83405887 + L1 LINE L1 3125 3348 -2798 23 0 0 0 chr10 56911164 56911187 -83405578 + AT_rich Low_complexity Low_complexity 1 23 0 386 306 62 10 chr10 56911354 56911547 -83405218 + L1MEd LINE L1 1054 1256 -4863 249 225 75 94 chr10 56911663 56911823 -83404942 + L1MEd LINE L1 1373 1529 -4600 28 0 0 0 chr10 56911976 56912004 -83404761 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 56912331 56912353 -83404412 + AT_rich Low_complexity Low_complexity 1 22 0 414 265 150 47 chr10 56912378 56913019 -83403746 + L1MEd LINE L1 2230 2936 -3193 716 261 85 0 chr10 56914762 56914950 -83401815 - MIR SINE MIR -10 252 49 2035 229 123 59 chr10 56917258 56917584 -83399181 + L1MB8 LINE L1 129 433 -5814 2110 101 0 13 chr10 56917584 56917882 -83398883 + AluSg SINE Alu 1 294 -16 252 59 0 0 chr10 56917882 56917916 -83398849 + (TA)n Simple_repeat Simple_repeat 2 35 0 2035 229 123 59 chr10 56917916 56919000 -83397765 + L1MB8 LINE L1 432 6194 -53 986 278 86 40 chr10 56919053 56919650 -83397115 + L1MEc LINE L1 1013 1652 -4744 2212 95 10 7 chr10 56919650 56919956 -83396809 + AluY SINE Alu 1 307 -4 986 278 86 40 chr10 56919956 56920092 -83396673 + L1MEc LINE L1 1652 1780 -4616 689 226 38 0 chr10 56920093 56920226 -83396539 + FRAM SINE Alu 23 160 -16 360 226 129 13 chr10 56920227 56920382 -83396383 + L1MEc LINE L1 1888 2060 -4336 1033 251 100 127 chr10 56920426 56920984 -83395781 + MLT1E LTR MaLR 51 593 0 722 234 159 6 chr10 56920991 56921311 -83395454 + L1MEc LINE L1 2081 2449 -3947 251 228 25 0 chr10 56921337 56921416 -83395349 - L1MC4 LINE L1 -1347 6695 6615 697 214 66 11 chr10 56921446 56921732 -83395033 + L1MEc LINE L1 2442 2825 -3390 180 346 44 79 chr10 56922387 56922794 -83393971 - L2 LINE L2 -772 2542 2150 22 35 0 0 chr10 56923942 56923971 -83392794 + AT_rich Low_complexity Low_complexity 1 29 0 334 138 46 0 chr10 56924300 56924365 -83392400 + L1MA9 LINE L1 6207 6274 -38 21 0 0 0 chr10 56924609 56924630 -83392135 + AT_rich Low_complexity Low_complexity 1 21 0 2245 90 0 3 chr10 56924638 56924939 -83391826 + AluY SINE Alu 1 300 -11 1203 288 73 2 chr10 56925171 56925647 -83391118 - L1MB7 LINE L1 -1 6183 5674 1321 189 0 0 chr10 56925647 56925875 -83390890 + AluJo SINE Alu 1 228 -84 599 244 16 57 chr10 56925908 56926101 -83390664 + LTR4 LTR ERV1 16 200 -396 772 212 49 76 chr10 56926300 56926588 -83390177 + LTR4 LTR ERV1 317 596 0 373 117 0 0 chr10 56926591 56926651 -83390114 + Alu SINE Alu 242 301 -1 1615 272 47 36 chr10 56926651 56927458 -83389307 - L1MB7 LINE L1 -508 5676 4855 672 114 129 0 chr10 56927458 56927590 -83389175 + L1MA5 LINE L1 6152 6300 0 1615 272 47 36 chr10 56927590 56927869 -83388896 - L1MB7 LINE L1 -1329 4855 4581 270 288 85 46 chr10 56928476 56928629 -83388136 - MIR SINE MIR -38 224 66 180 0 0 0 chr10 56928857 56928877 -83387888 + (T)n Simple_repeat Simple_repeat 1 20 0 187 284 176 0 chr10 56928953 56929027 -83387738 + MIR SINE MIR 20 106 -156 2226 121 0 0 chr10 56929071 56929368 -83387397 - AluSq SINE Alu -16 297 1 2027 266 38 24 chr10 56931205 56932091 -83384674 - L1M4 LINE L1 -787 5753 4855 256 252 91 43 chr10 56932100 56932227 -83384538 - L1MDa LINE L1 -2678 3862 3720 2072 116 10 0 chr10 56932227 56932529 -83384236 - AluSp SINE Alu -8 305 1 256 252 91 43 chr10 56932529 56932611 -83384154 - L1MDa LINE L1 -2820 3720 3643 348 194 49 56 chr10 56932627 56932771 -83383994 - L1MDa LINE L1 -2878 3662 3520 902 255 56 26 chr10 56932785 56933298 -83383467 - L1MDa LINE L1 -3488 3052 2523 1078 260 52 24 chr10 56933943 56934312 -83382453 - L1MDa LINE L1 -5318 1225 847 782 292 57 20 chr10 56934631 56934932 -83381833 - L1MDa LINE L1 -6196 344 33 198 260 0 0 chr10 56935071 56935144 -83381621 + GA-rich Low_complexity Low_complexity 2 74 0 284 283 11 65 chr10 56936185 56936277 -83380488 - L2 LINE L2 -6 3307 3221 11248 237 49 15 chr10 56936753 56941352 -83375413 - L1MB1 LINE L1 -5 5987 1274 1224 293 11 4 chr10 56941359 56941810 -83374955 - L1 LINE L1 -3112 3034 2581 7057 48 0 0 chr10 56941853 56942856 -83373909 - L1PA5 LINE L1 -1 6153 5139 5148 41 2 3 chr10 56942856 56943494 -83373271 + L1PA5 LINE L1 4505 5141 -1005 604 268 13 26 chr10 56943492 56943794 -83372971 - L1 LINE L1 -3569 2577 2280 * 1279 264 108 17 chr10 56943800 56943864 -83372901 - L1MB1 LINE L1 -4620 1271 1214 261 98 0 0 chr10 56943864 56943905 -83372860 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1279 264 108 17 chr10 56943905 56944370 -83372395 - L1MB1 LINE L1 -4677 1214 694 320 361 39 26 chr10 56944517 56944672 -83372093 - L1MB1 LINE L1 -5213 678 522 293 337 125 55 chr10 56944767 56945168 -83371597 - L1MB1 LINE L1 -5461 430 2 796 226 34 34 chr10 56945421 56945625 -83371140 + MER3 DNA MER1_type 5 208 -1 189 140 53 0 chr10 56945784 56945841 -83370924 + T-rich Low_complexity Low_complexity 1 60 0 289 278 164 48 chr10 56945932 56946196 -83370569 - HAL1 LINE L1 -9 2498 2181 294 50 0 0 chr10 56946196 56946236 -83370529 + (CA)n Simple_repeat Simple_repeat 1 40 0 289 278 164 48 chr10 56946236 56946324 -83370441 - HAL1 LINE L1 -326 2181 2105 1630 177 146 13 chr10 56946634 56947012 -83369753 + MSTA LTR MaLR 1 428 0 6135 66 22 1 chr10 56947177 56947991 -83368774 + L1PA7 LINE L1 5324 6154 0 21 0 0 0 chr10 56948256 56948277 -83368488 + AT_rich Low_complexity Low_complexity 1 21 0 1754 174 71 11 chr10 56948285 56948653 -83368112 + MLT1B LTR MaLR 1 390 0 31 68 0 0 chr10 56949091 56949150 -83367615 + AT_rich Low_complexity Low_complexity 1 59 0 1429 231 53 9 chr10 56949404 56949746 -83367019 - MLT1A1 LTR MaLR -3 362 6 189 278 125 0 chr10 56949857 56949929 -83366836 - MIR SINE MIR -110 152 72 22 0 0 0 chr10 56950506 56950528 -83366237 + AT_rich Low_complexity Low_complexity 1 22 0 298 302 111 29 chr10 56950750 56950835 -83365930 + HAL1 LINE L1 1560 1637 -870 7592 22 8 0 chr10 56950835 56952069 -83364696 - L1PA3 LINE L1 0 6155 4918 298 302 111 29 chr10 56952069 56952155 -83364610 + HAL1 LINE L1 1637 1745 -762 1013 191 45 104 chr10 56952515 56952850 -83363915 - MLT2D LTR ERVL 0 414 100 3698 160 61 1 chr10 56952850 56953525 -83363240 + L1PA16 LINE L1 5443 6157 -9 222 62 0 0 chr10 56953531 56953563 -83363202 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1261 151 0 0 chr10 56953712 56953898 -83362867 - AluJb SINE Alu -63 249 64 1263 200 57 113 chr10 56955188 56955593 -83361172 + MLT2B1 LTR ERVL 4 528 -26 511 249 0 11 chr10 56955593 56955770 -83360995 + (TATATG)n Simple_repeat Simple_repeat 1 175 0 492 245 29 82 chr10 56955796 56956004 -83360761 + L2 LINE L2 3117 3313 0 212 324 74 28 chr10 56956392 56956500 -83360265 - MIR SINE MIR -132 130 18 2099 108 3 16 chr10 56956629 56956935 -83359830 + AluSx SINE Alu 1 302 -10 611 161 31 8 chr10 56956961 56957091 -83359674 - L1PA16 LINE L1 -3 6163 6031 261 176 44 0 chr10 56957650 56957718 -83359047 + (TA)n Simple_repeat Simple_repeat 1 71 0 2336 200 21 21 chr10 56957965 56958439 -83358326 + MLT1D LTR MaLR 13 486 -19 1918 179 28 8 chr10 56958447 56958805 -83357960 - MLT1A1 LTR MaLR 0 365 1 26 50 0 0 chr10 56959724 56959764 -83357001 + AT_rich Low_complexity Low_complexity 1 40 0 287 226 103 65 chr10 56959806 56959961 -83356804 - L1MC5 LINE L1 -106 7855 7695 574 258 59 38 chr10 56960126 56960467 -83356298 - L1MC5 LINE L1 -657 7304 6957 890 261 3 79 chr10 56960509 56960862 -83355903 - L1MC5 LINE L1 -1000 6961 6636 653 256 136 6 chr10 56960865 56961041 -83355724 - MLT1D LTR MaLR 0 505 307 1301 232 69 0 chr10 56961228 56961517 -83355248 + AluJo SINE Alu 4 312 0 42 0 0 0 chr10 56961626 56961668 -83355097 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 57062700 57062723 -83254042 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 57062903 57062932 -83253833 + AT_rich Low_complexity Low_complexity 1 29 0 1899 157 3 0 chr10 57063085 57063371 -83253394 + AluSx SINE Alu 1 287 -25 214 312 18 28 chr10 57063524 57063633 -83253132 + CT-rich Low_complexity Low_complexity 6 113 0 1159 199 4 71 chr10 57064018 57064245 -83252520 - MER82 DNA MER2_type -390 263 22 212 0 36 0 chr10 57064245 57064273 -83252492 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1836 160 4 4 chr10 57064277 57064558 -83252207 - AluJo SINE Alu -31 281 1 1159 199 4 71 chr10 57064558 57064606 -83252159 - MER82 DNA MER2_type -634 19 2 220 234 0 0 chr10 57064640 57064687 -83252078 - MIR SINE MIR -111 151 105 685 306 123 18 chr10 57065346 57065686 -83251079 - L2 LINE L2 -36 3236 2861 1721 201 0 6 chr10 57066203 57066517 -83250248 + AluJo SINE Alu 1 312 0 328 323 69 15 chr10 57066608 57066738 -83250027 + MIR SINE MIR 62 198 -64 616 321 65 0 chr10 57067550 57067765 -83249000 + LTR33 LTR ERVL 1 229 -292 28 61 0 0 chr10 57068097 57068146 -83248619 + AT_rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr10 57068563 57068591 -83248174 + AT_rich Low_complexity Low_complexity 1 28 0 35 41 0 0 chr10 57068897 57068946 -83247819 + AT_rich Low_complexity Low_complexity 1 49 0 618 332 91 8 chr10 57069205 57069446 -83247319 - MIR SINE MIR 0 262 2 2671 229 15 30 chr10 57070090 57070308 -83246457 + MER82 DNA MER2_type 8 228 -425 5517 108 9 0 chr10 57070308 57070653 -83246112 - L1PB1 LINE L1 0 6151 5811 249 33 0 0 chr10 57070653 57070683 -83246082 + (TA)n Simple_repeat Simple_repeat 2 31 0 5517 108 9 0 chr10 57070683 57071272 -83245493 - L1PB1 LINE L1 -340 5811 5190 2671 229 15 30 chr10 57071272 57071708 -83245057 + MER82 DNA MER2_type 228 652 -1 2457 222 42 44 chr10 57072306 57072901 -83243864 - MER77 LTR ERV1 -11 594 1 2922 83 4 135 chr10 57073437 57073957 -83242808 - MLT2A2 LTR ERVL -1 452 1 271 236 57 85 chr10 57073987 57074093 -83242672 - MIR SINE MIR -2 260 158 284 373 16 16 chr10 57074288 57074414 -83242351 - MIR SINE MIR -135 127 2 21 71 0 0 chr10 57075377 57075419 -83241346 + AT_rich Low_complexity Low_complexity 1 42 0 778 183 72 61 chr10 57075559 57075739 -83241026 - L1PB4 LINE L1 -13 6143 5962 243 103 26 0 chr10 57075946 57075985 -83240780 + MADE1 DNA Mariner 2 41 -39 2274 85 0 0 chr10 57076461 57076754 -83240011 - AluY SINE Alu -18 293 1 184 340 0 0 chr10 57076880 57076927 -83239838 + MER5A DNA MER1_type 55 101 -88 22 35 0 0 chr10 57077224 57077253 -83239512 + AT_rich Low_complexity Low_complexity 1 29 0 1966 133 51 24 chr10 57077817 57078148 -83238617 + THE1B LTR MaLR 1 340 -24 1535 266 24 31 chr10 57078815 57079267 -83237498 - MER110 LTR ERV1 -40 451 3 2269 309 86 35 chr10 57080223 57081581 -83235184 + L1PBa LINE L1 6 1433 -5430 268 184 51 0 chr10 57081645 57081743 -83235022 + (TA)n Simple_repeat Simple_repeat 1 103 0 2139 124 18 54 chr10 57081744 57082130 -83234635 + L1PB3 LINE L1 5783 6154 0 24 32 0 0 chr10 57082152 57082183 -83234582 + AT_rich Low_complexity Low_complexity 1 31 0 282 314 97 8 chr10 57082961 57083085 -83233680 - MLT1K LTR MaLR -326 262 128 344 252 7 0 chr10 57083840 57083979 -83232786 + (TA)n Simple_repeat Simple_repeat 2 141 0 203 0 0 36 chr10 57084289 57084317 -83232448 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 21 0 0 0 chr10 57086274 57086295 -83230470 + AT_rich Low_complexity Low_complexity 1 21 0 362 295 88 36 chr10 57086641 57086834 -83229931 + MLT1H1 LTR MaLR 61 263 -292 3806 204 36 57 chr10 57088654 57089738 -83227027 + L1MA10 LINE L1 5274 6334 0 1935 160 6 12 chr10 57090512 57090843 -83225922 + MER7C DNA MER2_type 18 346 -256 2669 24 0 0 chr10 57091099 57091393 -83225372 + AluYb8 SINE Alu 1 294 -24 239 254 0 0 chr10 57091777 57091840 -83224925 + (TA)n Simple_repeat Simple_repeat 1 63 0 4754 68 16 5 chr10 57091840 57092462 -83224303 - L1PA7 LINE L1 -15 6139 5511 2193 39 21 0 chr10 57092462 57092746 -83224019 + L1P3 LINE L1 5264 5553 -601 26 30 0 0 chr10 57092872 57092905 -83223860 + AT_rich Low_complexity Low_complexity 1 33 0 359 238 10 69 chr10 57093237 57093338 -83223427 + MER5A DNA MER1_type 18 112 -77 10391 108 1 5 chr10 57093479 57094940 -83221825 + HERV9 LTR ERV1 1742 3197 -5202 5954 93 13 13 chr10 57094931 57096184 -83220581 + HERV9 LTR ERV1 7072 8399 0 * 232 269 0 0 chr10 57096184 57096236 -83220529 + LTR30 LTR ERV1 1 52 -670 1947 107 126 224 chr10 57096236 57096824 -83219941 + LTR12 LTR ERV1 53 582 -132 447 19 0 0 chr10 57097661 57097713 -83219052 + (CA)n Simple_repeat Simple_repeat 1 52 0 381 313 6 18 chr10 57098587 57098753 -83218012 - L2 LINE L2 -1536 1778 1615 5600 124 5 53 chr10 57098802 57099616 -83217149 + THE1C-int LTR MaLR 705 1472 -108 5783 123 9 2 chr10 57099616 57100991 -83215774 + L1PA8 LINE L1 4785 6167 -5 5600 124 5 53 chr10 57100991 57101096 -83215669 + THE1C-int LTR MaLR 1472 1580 0 1731 174 86 14 chr10 57101096 57101446 -83215319 + THE1C LTR MaLR 1 375 0 1152 186 35 0 chr10 57101704 57101935 -83214830 - Tigger3(Golem) DNA MER2_type -1 3028 2790 1311 172 8 21 chr10 57102851 57103089 -83213676 + MER2 DNA MER2_type 1 235 -110 1782 163 0 10 chr10 57103574 57103862 -83212903 - AluJo SINE Alu -27 285 1 500 236 30 65 chr10 57103862 57104125 -83212640 - LTR37B LTR ERV1 -4 464 211 267 190 25 124 chr10 57104298 57104419 -83212346 - LTR37B LTR ERV1 -359 109 1 219 233 0 0 chr10 57105792 57105835 -83210930 + (CA)n Simple_repeat Simple_repeat 2 44 0 39 0 0 0 chr10 57106897 57106936 -83209829 + AT_rich Low_complexity Low_complexity 1 39 0 446 103 0 0 chr10 57106936 57107004 -83209761 - L1MA2 LINE L1 -7 6297 6230 318 67 0 44 chr10 57107004 57107049 -83209716 + L1MA1 LINE L1 6178 6220 -82 655 241 13 95 chr10 57107402 57107634 -83209131 + MIR SINE MIR 24 236 -26 3768 151 56 31 chr10 57107899 57108665 -83208100 + LTR1 LTR ERV1 1 785 0 431 336 97 18 chr10 57109673 57109890 -83206875 + MIR SINE MIR 28 261 -1 234 226 60 0 chr10 57113812 57113896 -83202869 + L1ME LINE L1 825 913 -5292 25 75 0 0 chr10 57114105 57114158 -83202607 + AT_rich Low_complexity Low_complexity 1 53 0 233 209 15 0 chr10 57114322 57114389 -83202376 + (CA)n Simple_repeat Simple_repeat 2 69 0 1001 284 120 19 chr10 57114399 57115039 -83201726 + L1ME LINE L1 1411 2162 -4234 7103 63 0 0 chr10 57115039 57116142 -83200623 + L1PA7 LINE L1 5077 6154 0 1001 284 120 19 chr10 57116142 57116361 -83200404 + L1ME LINE L1 2162 2357 -4039 26 0 0 0 chr10 57117134 57117160 -83199605 + AT_rich Low_complexity Low_complexity 1 26 0 317 308 47 9 chr10 57118106 57118213 -83198552 + MIR SINE MIR 31 141 -121 3299 218 42 43 chr10 57118488 57119568 -83197197 - L1MD1 LINE L1 0 6242 5156 602 135 27 27 chr10 57119568 57119679 -83197086 - FLAM_C SINE Alu -9 134 24 1276 258 45 67 chr10 57119692 57120164 -83196601 - L1MD1 LINE L1 -982 5164 4714 2135 111 10 0 chr10 57120164 57120462 -83196303 - AluSx SINE Alu -7 305 5 1276 258 45 67 chr10 57120462 57120764 -83196001 - L1MD1 LINE L1 -1432 4714 4407 1879 269 61 6 chr10 57120847 57121521 -83195244 - L1MD1 LINE L1 -1888 4258 3548 2081 225 53 19 chr10 57121528 57122098 -83194667 + L1MC3 LINE L1 6503 7091 -694 244 253 51 0 chr10 57122103 57122182 -83194583 + MLT1F1 LTR MaLR 35 117 -450 770 240 10 20 chr10 57122216 57122416 -83194349 + L1MC3 LINE L1 7232 7429 -356 4077 67 6 0 chr10 57122926 57123452 -83193313 - L1PA7 LINE L1 0 6154 5626 23 33 0 0 chr10 57123652 57123682 -83193083 + AT_rich Low_complexity Low_complexity 1 30 0 542 326 23 32 chr10 57123756 57123977 -83192788 + MIR SINE MIR 34 252 -10 374 57 19 0 chr10 57124351 57124404 -83192361 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 417 345 39 26 chr10 57124446 57124675 -83192090 - MIR SINE MIR -19 243 12 27 0 0 0 chr10 57125092 57125119 -83191646 + AT_rich Low_complexity Low_complexity 1 27 0 614 264 0 0 chr10 57127011 57127170 -83189595 - MER45B DNA AcHobo -724 316 699 228 133 0 0 chr10 57127199 57127244 -83189521 + LTR66 LTR ERVL 394 438 -172 1877 133 112 44 chr10 57127274 57127659 -83189106 - LTR57 LTR ERVL 0 411 1 8431 168 47 16 chr10 57127659 57129139 -83187626 - LTR57-int LTR ERVL 0 5343 3818 * 18066 164 22 14 chr10 57129135 57131609 -83185156 - LTR57-int LTR ERVL -2191 3152 646 201 94 0 0 chr10 57131609 57131641 -83185124 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 18066 164 22 14 chr10 57131641 57132293 -83184472 - LTR57-int LTR ERVL -4697 646 1 824 192 24 6 chr10 57132293 57132460 -83184305 - LTR57 LTR ERVL 0 411 242 348 97 0 125 chr10 57132475 57132547 -83184218 - LTR57 LTR ERVL -348 63 1 * 2456 243 45 56 chr10 57132547 57132916 -83183849 - MER45B DNA AcHobo -352 688 329 997 209 83 88 chr10 57132916 57133289 -83183476 + MLT1A2 LTR MaLR 1 371 -3 2456 243 45 56 chr10 57133289 57133615 -83183150 - MER45B DNA AcHobo -711 329 1 441 335 168 15 chr10 57135782 57136369 -83180396 + L2 LINE L2 2637 3313 0 334 341 23 23 chr10 57136689 57136821 -83179944 + MIR3 SINE MIR 15 146 -62 31 26 0 0 chr10 57136917 57136955 -83179810 + AT_rich Low_complexity Low_complexity 1 38 0 2658 161 37 12 chr10 57137338 57137823 -83178942 - LOR1a LTR ERV1 0 497 1 344 69 0 69 chr10 57138452 57138510 -83178255 + MADE1 DNA Mariner 1 54 -26 243 0 0 0 chr10 57138510 57138537 -83178228 + (CAAAAA)n Simple_repeat Simple_repeat 5 31 0 2327 54 3 44 chr10 57138551 57138866 -83177899 - AluSp SINE Alu -11 302 1 1503 199 12 25 chr10 57139416 57139737 -83177028 + MLT1A2 LTR MaLR 33 349 -25 10894 132 9 5 chr10 57139766 57142299 -83174466 - L1PA10 LINE L1 -16 6467 3921 1090 51 0 0 chr10 57142309 57142447 -83174318 - L1PA4 LINE L1 -3 6152 6015 3855 173 22 4 chr10 57142447 57143204 -83173561 - L1PA10 LINE L1 -2543 3918 3148 198 0 0 0 chr10 57143206 57143228 -83173537 + (TTA)n Simple_repeat Simple_repeat 3 24 0 10587 93 7 1 chr10 57143228 57145502 -83171263 - L1PA7 LINE L1 -18 6136 3855 5822 112 4 13 chr10 57145503 57147205 -83169560 + L1PA7 LINE L1 2221 3826 -2320 * 9225 188 20 51 chr10 57147204 57148958 -83167807 - L1PA10 LINE L1 -3305 3156 1537 2005 97 57 0 chr10 57148958 57149237 -83167528 - AluSx SINE Alu -17 295 1 9225 188 20 51 chr10 57149237 57150720 -83166045 - L1PA10 LINE L1 -4924 1537 10 240 111 0 0 chr10 57151279 57151315 -83165450 + (TA)n Simple_repeat Simple_repeat 2 37 0 248 278 0 0 chr10 57151315 57151405 -83165360 + L1MC4 LINE L1 6614 6703 -1339 2291 71 0 53 chr10 57153285 57153607 -83163158 + AluY SINE Alu 3 307 -4 1184 281 70 59 chr10 57154216 57154831 -83161934 - MER21B LTR ERV1 -127 804 86 183 114 0 0 chr10 57154831 57154866 -83161899 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 1184 281 70 59 chr10 57154866 57154932 -83161833 - MER21B LTR ERV1 -845 86 22 407 325 55 0 chr10 57155062 57155227 -83161538 - MIR SINE MIR -35 227 55 465 322 69 6 chr10 57155301 57155475 -83161290 - MIR SINE MIR -49 213 29 632 228 126 0 chr10 57156382 57156549 -83160216 + MER5A DNA MER1_type 1 188 -1 1112 295 49 26 chr10 57156978 57157422 -83159343 + L1MB5 LINE L1 576 1006 -6559 3381 267 50 37 chr10 57157470 57159053 -83157712 + L1MB5 LINE L1 1867 3471 -4094 739 54 27 0 chr10 57159057 57159169 -83157596 + (GAAA)n Simple_repeat Simple_repeat 1 115 0 207 0 0 0 chr10 57159776 57159799 -83156966 + (T)n Simple_repeat Simple_repeat 1 23 0 288 327 39 10 chr10 57159903 57160007 -83156758 + MER91C DNA MER1_type 33 139 -1 21 0 0 0 chr10 57160068 57160089 -83156676 + AT_rich Low_complexity Low_complexity 1 21 0 6652 80 17 7 chr10 57160090 57161112 -83155653 - L1PA8 LINE L1 -22 6150 5129 2064 245 14 37 chr10 57161894 57162610 -83154155 + L1MEc LINE L1 2170 2833 -3382 10719 214 56 14 chr10 57162611 57163096 -83153669 - L1M1 LINE L1 -5249 2316 1852 207 0 0 0 chr10 57163096 57163119 -83153646 + (TC)n Simple_repeat Simple_repeat 2 24 0 10719 214 56 14 chr10 57163119 57164839 -83151926 - L1M1 LINE L1 -5713 1852 20 772 203 0 7 chr10 57164843 57164991 -83151774 + Tigger7 DNA MER2_type 2341 2487 0 2000 138 6 6 chr10 57165737 57166049 -83150716 - AluSq SINE Alu -1 312 1 650 206 23 11 chr10 57167258 57167433 -83149332 + MER96B DNA MER1_type? 2 178 -239 232 302 123 19 chr10 57168392 57168498 -83148267 - MLT1K LTR MaLR -309 279 163 304 245 13 60 chr10 57168863 57168967 -83147798 - Charlie4 DNA MER1_type -3 1958 1862 432 55 0 0 chr10 57168967 57169022 -83147743 + (CA)n Simple_repeat Simple_repeat 2 56 0 304 245 13 60 chr10 57169022 57169068 -83147697 - Charlie4 DNA MER1_type -99 1862 1815 246 250 19 115 chr10 57169188 57169292 -83147473 + MER5B DNA MER1_type 84 177 -1 418 267 200 20 chr10 57169301 57169451 -83147314 - MER5A DNA MER1_type 0 189 13 22 0 0 0 chr10 57169669 57169691 -83147074 + AT_rich Low_complexity Low_complexity 1 22 0 611 259 104 0 chr10 57169751 57170002 -83146763 + L1MB5 LINE L1 4019 4295 -3270 2459 224 44 18 chr10 57170021 57171113 -83145652 + L1MB5 LINE L1 6275 7384 -209 276 149 0 0 chr10 57171123 57171170 -83145595 + (CCCCCT)n Simple_repeat Simple_repeat 5 51 0 186 260 213 5 chr10 57171192 57171288 -83145477 - MIR SINE MIR -59 149 32 592 210 136 34 chr10 57171419 57171595 -83145170 + L1MB5 LINE L1 7400 7593 0 685 181 14 67 chr10 57171989 57172199 -83144566 + MER33 DNA MER1_type 27 225 -99 955 256 19 31 chr10 57172306 57172564 -83144201 + MLT1A1 LTR MaLR 4 258 -107 1331 189 144 19 chr10 57172565 57172877 -83143888 - MLT1A1 LTR MaLR -14 351 1 293 319 174 5 chr10 57174952 57175159 -83141606 - MIR SINE MIR 0 262 21 189 0 0 0 chr10 57175845 57175866 -83140899 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2764 97 23 5 chr10 57176069 57176460 -83140305 + MLT2A1 LTR ERVL 2 399 -45 313 230 27 0 chr10 57176461 57176535 -83140230 + L1MC4 LINE L1 6618 6693 -1349 288 125 0 36 chr10 57176537 57176593 -83140172 + MLT2A2 LTR ERVL 400 453 0 321 343 11 56 chr10 57177143 57177321 -83139444 + MIR SINE MIR 20 189 -73 342 239 83 46 chr10 57177602 57177711 -83139054 - L2 LINE L2 0 3272 3160 28 71 0 0 chr10 57178157 57178213 -83138552 + AT_rich Low_complexity Low_complexity 1 56 0 5799 68 4 1 chr10 57178234 57178989 -83137776 - L1PA7 LINE L1 -1 6153 5397 473 60 60 10 chr10 57178989 57179089 -83137676 + (TA)n Simple_repeat Simple_repeat 2 106 0 591 218 60 64 chr10 57180314 57180548 -83136217 + L1M4 LINE L1 4163 4395 -1751 1596 113 0 0 chr10 57180628 57180841 -83135924 + AluSx SINE Alu 1 213 -99 745 138 24 0 chr10 57180843 57180966 -83135799 + MER34 LTR ERV1 417 542 0 1636 276 70 151 chr10 57180998 57181869 -83134896 + L2 LINE L2 807 1747 -1567 1197 75 23 0 chr10 57181869 57182043 -83134722 - L1P3 LINE L1 -735 5437 5260 5108 65 0 5 chr10 57182043 57182698 -83134067 + L1PA8 LINE L1 5511 6166 -6 1636 276 70 151 chr10 57182698 57183458 -83133307 + L2 LINE L2 1745 2466 -848 1304 189 43 81 chr10 57183460 57183831 -83132934 - MLT1A1 LTR MaLR -2 363 7 1007 332 28 19 chr10 57183882 57184304 -83132461 + L2 LINE L2 2519 2944 -370 2016 129 3 7 chr10 57185245 57185539 -83131226 + AluSx SINE Alu 1 293 -19 273 160 30 40 chr10 57185674 57185774 -83130991 + (TA)n Simple_repeat Simple_repeat 2 100 0 22 0 0 0 chr10 57185957 57185979 -83130786 + AT_rich Low_complexity Low_complexity 1 22 0 272 359 109 13 chr10 57186029 57186185 -83130580 - L3 LINE CR1 -160 1417 1247 2332 78 0 23 chr10 57186198 57186506 -83130259 - AluY SINE Alu -5 306 6 1548 232 39 32 chr10 57186512 57186974 -83129791 + L1MA9 LINE L1 4848 5312 -834 2457 135 21 5 chr10 57187009 57187445 -83129320 - L1MA2 LINE L1 -2 6302 5860 41254 63 4 2 chr10 57187446 57193583 -83123182 + L1PA5 LINE L1 1 6150 -4 3157 123 10 8 chr10 57193590 57194079 -83122686 - L1MA2 LINE L1 -432 5873 5384 2528 186 21 39 chr10 57194078 57194644 -83122121 + L1MA9 LINE L1 5299 5854 -458 * 344 339 16 32 chr10 57194785 57194974 -83121791 + MIR SINE MIR 54 239 -23 28 29 0 0 chr10 57195163 57195198 -83121567 + AT_rich Low_complexity Low_complexity 1 35 0 2542 148 24 10 chr10 57195673 57196084 -83120681 + MSTA LTR MaLR 1 417 -11 312 342 26 9 chr10 57196512 57196626 -83120139 - MIR SINE MIR -116 146 31 3756 136 12 18 chr10 57196838 57197542 -83119223 + L1PA15 LINE L1 5166 5864 -301 1219 175 0 5 chr10 57197559 57197770 -83118995 + L1PA15 LINE L1 5956 6165 0 260 274 53 0 chr10 57198436 57198531 -83118234 + L1ME LINE L1 5743 5842 -279 533 220 120 0 chr10 57198534 57198684 -83118081 + MER3 DNA MER1_type 2 122 -87 44 35 0 0 chr10 57198975 57199033 -83117732 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 0 chr10 57199949 57199973 -83116792 + AT_rich Low_complexity Low_complexity 1 24 0 2025 113 27 3 chr10 57200420 57200712 -83116053 + AluSq SINE Alu 1 299 -14 2186 102 3 0 chr10 57200969 57201262 -83115503 + AluSg SINE Alu 1 294 -16 275 303 110 39 chr10 57201803 57201958 -83114807 - MIR3 SINE MIR -27 181 16 26 0 0 0 chr10 57203006 57203032 -83113733 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr10 57203280 57203324 -83113441 + AT_rich Low_complexity Low_complexity 1 44 0 1074 297 86 44 chr10 57203345 57204236 -83112529 + L1M4 LINE L1 3506 4434 -1712 316 259 60 52 chr10 57204257 57204373 -83112392 + L2 LINE L2 2589 2705 -609 744 227 173 18 chr10 57204375 57204595 -83112170 - MLT1D LTR MaLR 0 505 252 397 299 126 17 chr10 57204622 57204853 -83111912 + L2 LINE L2 2891 3146 -167 317 338 59 0 chr10 57204918 57205054 -83111711 - MER46C DNA MER2_type -115 223 80 408 296 40 33 chr10 57205132 57205284 -83111481 + L2 LINE L2 3161 3313 0 21 36 0 0 chr10 57205345 57205373 -83111392 + AT_rich Low_complexity Low_complexity 1 28 0 976 121 6 52 chr10 57205486 57205659 -83111106 + THE1C LTR MaLR 4 168 -207 1146 122 24 38 chr10 57205752 57205965 -83110800 + THE1C LTR MaLR 162 371 -4 377 208 0 12 chr10 57206466 57206558 -83110207 - L1ME1 LINE L1 0 6164 6077 657 233 23 0 chr10 57206572 57206705 -83110060 + AluJo SINE Alu 3 138 -174 1373 237 111 49 chr10 57206710 57207280 -83109485 - L1ME1 LINE L1 -104 6062 5458 312 217 50 94 chr10 57207281 57207461 -83109304 + L1ME1 LINE L1 5794 5965 -201 1351 272 109 10 chr10 57207555 57208530 -83108235 - L1ME1 LINE L1 -697 5473 4374 1615 271 40 59 chr10 57208535 57209045 -83107720 - L1ME1 LINE L1 -5 6161 5670 1252 191 76 29 chr10 57209045 57209322 -83107443 + AluJo SINE Alu 2 291 -21 1615 271 40 59 chr10 57209322 57209602 -83107163 - L1ME1 LINE L1 -496 5670 5386 552 278 53 25 chr10 57209709 57210029 -83106736 - L1ME1 LINE L1 -912 5234 4906 754 272 45 47 chr10 57210119 57210501 -83106264 - L1MCc LINE L1 -6018 405 25 192 167 0 0 chr10 57211368 57211416 -83105349 + (TA)n Simple_repeat Simple_repeat 2 49 0 11000 32 7 0 chr10 57212365 57213715 -83103050 - L1PA3 LINE L1 -2105 4041 2683 11407 25 0 0 chr10 57213715 57215838 -83100927 + L1PA3 LINE L1 4028 6152 -3 31 0 0 0 chr10 57215838 57215869 -83100896 + AT_rich Low_complexity Low_complexity 1 31 0 44 35 0 0 chr10 57217097 57217155 -83099610 + AT_rich Low_complexity Low_complexity 1 58 0 273 304 49 0 chr10 57218085 57218187 -83098578 - MER103 DNA DNA -49 117 11 722 280 4 18 chr10 57218371 57218596 -83098169 + MER58A DNA MER1_type 3 224 0 24 32 0 0 chr10 57218874 57218905 -83097860 + AT_rich Low_complexity Low_complexity 1 31 0 3208 21 3 0 chr10 57219395 57219772 -83096993 - L1PA2 LINE L1 -4 6151 5774 400 230 26 9 chr10 57220254 57220367 -83096398 - MER53 DNA DNA -2 187 73 1236 272 68 20 chr10 57220420 57220858 -83095907 - MLT1D LTR MaLR -46 459 1 402 245 90 45 chr10 57220921 57221076 -83095689 + MER5B DNA MER1_type 7 168 -10 1311 218 51 9 chr10 57221166 57221501 -83095264 - L1MB7 LINE L1 -31 6153 5805 361 143 0 0 chr10 57221501 57221557 -83095208 - MER53 DNA DNA -133 56 1 1093 293 66 32 chr10 57221742 57222213 -83094552 + MLT1J LTR MaLR 20 506 -5 399 41 0 0 chr10 57222230 57222279 -83094486 + (CA)n Simple_repeat Simple_repeat 1 49 0 704 236 84 56 chr10 57222543 57222865 -83093900 - L1MC4 LINE L1 -181 7861 7531 502 174 46 0 chr10 57222898 57223007 -83093758 + L1MC4 LINE L1 6974 7087 -955 2092 186 87 30 chr10 57223684 57224157 -83092608 - MLT1D LTR MaLR 0 505 6 1070 225 1 80 chr10 57225546 57225906 -83090859 - L1MA10 LINE L1 -2 6332 6002 25 0 0 0 chr10 57226255 57226280 -83090485 + AT_rich Low_complexity Low_complexity 1 25 0 1374 220 34 40 chr10 57226567 57226680 -83090085 - MER7A DNA MER2_type -2692 346 234 1865 155 24 21 chr10 57226680 57227016 -83089749 + MER1B DNA MER1_type 1 337 0 1374 220 34 40 chr10 57227016 57227252 -83089513 - MER7A DNA MER2_type -2804 234 1 1668 61 0 5 chr10 57227506 57227720 -83089045 - AluY SINE Alu 0 311 99 388 20 0 0 chr10 57227720 57227770 -83088995 - AluY SINE Alu -252 50 1 2360 45 21 0 chr10 57228232 57228523 -83088242 + AluY SINE Alu 1 297 -14 312 289 118 0 chr10 57228855 57229007 -83087758 - MIR SINE MIR -14 248 79 335 307 65 26 chr10 57229608 57229761 -83087004 + MIR SINE MIR 103 261 -1 192 200 0 0 chr10 57230353 57230398 -83086367 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 6063 111 8 9 chr10 57230487 57231396 -83085369 - L1PA10 LINE L1 -7 6161 5254 1571 182 21 29 chr10 57231403 57231783 -83084982 - L1P LINE L1 -2646 3500 3124 324 0 0 0 chr10 57231954 57231990 -83084775 + (CA)n Simple_repeat Simple_repeat 1 36 0 3540 17 7 0 chr10 57232458 57232867 -83083898 - L1PA4 LINE L1 -208 5947 5536 1626 44 0 0 chr10 57232868 57233072 -83083693 + L1PA4 LINE L1 5949 6152 -3 514 321 130 14 chr10 57233934 57234149 -83082616 - MIR SINE MIR -6 256 17 1183 95 0 0 chr10 57235280 57235438 -83081327 + AluY SINE Alu 144 301 -10 199 211 0 0 chr10 57235539 57235577 -83081188 + L2 LINE L2 3276 3313 0 1720 164 7 24 chr10 57236672 57236964 -83079801 - THE1B LTR MaLR -77 287 1 11011 108 12 0 chr10 57236969 57238518 -83078247 - THE1B-int LTR MaLR -6 1574 8 1853 169 31 28 chr10 57238518 57238878 -83077887 - THE1B LTR MaLR -3 361 1 284 246 27 36 chr10 57238926 57239036 -83077729 + CT-rich Low_complexity Low_complexity 3 111 0 379 297 143 0 chr10 57239103 57239278 -83077487 + MIR SINE MIR 63 262 0 209 310 53 26 chr10 57239351 57239464 -83077301 - L2 LINE L2 -40 3273 3158 589 304 90 37 chr10 57239868 57240167 -83076598 + LTR16C LTR ERVL 168 482 -9 842 265 26 8 chr10 57240277 57240511 -83076254 - MIR SINE MIR -13 249 12 218 179 0 0 chr10 57240535 57240574 -83076191 + (CAT)n Simple_repeat Simple_repeat 2 40 0 223 352 76 19 chr10 57240974 57241079 -83075686 + L2 LINE L2 2986 3096 -176 22 0 0 0 chr10 57242317 57242339 -83074426 + AT_rich Low_complexity Low_complexity 1 22 0 2232 154 70 24 chr10 57244055 57244470 -83072295 + Tigger2a DNA MER2_type 1 434 0 319 277 109 47 chr10 57244668 57244977 -83071788 - MLT1J1 LTR MaLR 0 446 73 360 0 0 0 chr10 57245230 57245270 -83071495 + (TG)n Simple_repeat Simple_repeat 1 40 0 195 42 0 0 chr10 57245330 57245354 -83071411 + (CTAAG)n Simple_repeat Simple_repeat 2 25 0 1493 212 44 25 chr10 57245497 57245862 -83070903 - MLT1A2 LTR MaLR -2 465 1 21 57 0 0 chr10 57246179 57246214 -83070551 + AT_rich Low_complexity Low_complexity 1 35 0 577 273 52 22 chr10 57247589 57247820 -83068945 + L1MEc LINE L1 35 272 -6124 3768 110 214 22 chr10 57248107 57248800 -83067965 - LTR12 LTR ERV1 0 826 1 1890 148 70 12 chr10 57249229 57249559 -83067206 + MER61C LTR ERV1 86 434 0 709 330 24 114 chr10 57250021 57250737 -83066028 - L2 LINE L2 -661 2653 2003 232 328 86 31 chr10 57251329 57251457 -83065308 + MIR SINE MIR 16 150 -58 424 167 0 0 chr10 57252889 57252973 -83063792 + L1MA4 LINE L1 6211 6294 -6 1277 155 184 16 chr10 57253553 57253862 -83062903 - MER46B DNA MER2_type 0 236 1 682 217 37 0 chr10 57254624 57254785 -83061980 - L1MC4 LINE L1 -507 7535 7369 1276 248 159 31 chr10 57254874 57255221 -83061544 - L1MC4 LINE L1 -957 7085 6784 504 0 0 0 chr10 57255221 57255277 -83061488 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 1276 248 159 31 chr10 57255277 57255482 -83061283 - L1MC4 LINE L1 -1258 6784 6462 513 180 60 10 chr10 57256441 57256541 -83060224 + Tigger3b DNA MER2_type 1 105 -1126 * 5056 149 55 10 chr10 57256533 57257471 -83059294 + Tigger3b DNA MER2_type 250 1230 -1 363 318 114 5 chr10 57257817 57258018 -83058747 + MIR SINE MIR 40 262 0 1832 91 0 0 chr10 57258234 57258497 -83058268 - pTR5 LTR ERV1 -2046 392 130 233 287 11 11 chr10 57258724 57258811 -83057954 - L1MCa LINE L1 -4922 1504 1418 219 146 48 39 chr10 57258911 57259014 -83057751 + (TA)n Simple_repeat Simple_repeat 2 105 0 1724 270 63 19 chr10 57259154 57260028 -83056737 - L1MC4 LINE L1 -146 7896 6838 199 327 47 19 chr10 57260168 57260275 -83056490 - MIR SINE MIR -105 157 48 24 32 0 0 chr10 57260821 57260852 -83055913 + AT_rich Low_complexity Low_complexity 1 31 0 219 344 44 81 chr10 57261902 57262062 -83054703 - L2 LINE L2 0 3272 3119 1473 256 4 18 chr10 57262890 57263266 -83053499 - MLT1A2 LTR MaLR 0 467 4 207 268 18 0 chr10 57263725 57263781 -83052984 + (TG)n Simple_repeat Simple_repeat 2 58 0 816 174 0 0 chr10 57265295 57265427 -83051338 + LTR1 LTR ERV1 652 783 -2 3081 148 18 27 chr10 57265428 57265990 -83050775 + L1PA16 LINE L1 5610 6166 0 814 303 55 31 chr10 57266030 57266320 -83050445 + L1M4 LINE L1 282 578 -5964 2202 213 36 51 chr10 57266321 57266881 -83049884 + LTR27 LTR ERV1 1 1273 -141 432 210 76 51 chr10 57266875 57267032 -83049733 + LTR27 LTR ERV1 476 636 0 * 2324 243 54 13 chr10 57267096 57267768 -83048997 + L1M4 LINE L1 621 1319 -5223 319 274 19 0 chr10 57267774 57267880 -83048885 + L1M4 LINE L1 1606 1713 -4933 2320 150 54 5 chr10 57267881 57268344 -83048421 - MER4B LTR ERV1 0 779 132 2170 199 36 9 chr10 57268344 57268791 -83047974 - LOR1b LTR ERV1 0 461 3 570 165 0 0 chr10 57268793 57268884 -83047881 - LOR1b-int LTR ERV1 0 8120 8030 * 1625 144 0 4 chr10 57268883 57269140 -83047625 - LOR1b-int LTR ERV1 -2056 6064 5809 * 27513 127 53 33 chr10 57269134 57271967 -83044798 - LOR1b-int LTR ERV1 -2592 5528 2756 246 62 0 0 chr10 57271967 57271999 -83044766 + (TA)n Simple_repeat Simple_repeat 1 32 0 27513 127 53 33 chr10 57271999 57273240 -83043525 - LOR1b-int LTR ERV1 -5364 2756 1542 1914 141 3 3 chr10 57273240 57273531 -83043234 - AluSx SINE Alu -21 291 1 27513 127 53 33 chr10 57273531 57274063 -83042702 - LOR1b-int LTR ERV1 -6578 1542 1023 243 0 0 0 chr10 57274063 57274090 -83042675 + (CA)n Simple_repeat Simple_repeat 2 28 0 27513 127 53 33 chr10 57274090 57274695 -83042070 - LOR1b-int LTR ERV1 -7097 1023 206 1827 187 42 6 chr10 57274707 57275065 -83041700 - LOR1b-int LTR ERV1 -7749 371 1 2076 197 29 18 chr10 57275065 57275521 -83041244 - LOR1b LTR ERV1 0 461 1 538 150 18 35 chr10 57275522 57275635 -83041130 - MER4B LTR ERV1 -476 134 24 1278 280 70 52 chr10 57275647 57276705 -83040060 + L1M4 LINE L1 1865 2941 -3884 988 323 36 22 chr10 57276765 57277319 -83039446 - L1PBa LINE L1 -6299 564 3 1040 235 56 0 chr10 57277328 57277630 -83039135 + L1M4 LINE L1 2884 3202 -3442 * 3042 229 45 11 chr10 57277626 57278729 -83038036 + L1M4 LINE L1 4832 5974 -702 21 36 0 0 chr10 57278756 57278784 -83037981 + AT_rich Low_complexity Low_complexity 1 28 0 508 173 43 7 chr10 57279433 57279572 -83037193 + L1MA7 LINE L1 6129 6272 -19 331 305 96 60 chr10 57279912 57280161 -83036604 - MIR SINE MIR -1 261 4 311 232 0 11 chr10 57280841 57280936 -83035829 - L1MC4 LINE L1 -1339 6703 6610 189 318 85 0 chr10 57281030 57281159 -83035606 - MIR SINE MIR -30 232 93 563 308 19 28 chr10 57281308 57281519 -83035246 - MIR SINE MIR 0 262 54 287 295 23 129 chr10 57281919 57282136 -83034629 - L2 LINE L2 -1756 1558 1365 299 386 33 43 chr10 57282465 57282649 -83034116 + L2 LINE L2 3081 3262 -10 336 276 224 9 chr10 57282810 57282926 -83033839 - MER5A DNA MER1_type -21 168 28 7046 48 20 0 chr10 57283163 57284119 -83032646 - L1PA5 LINE L1 0 6154 5205 422 342 82 39 chr10 57284779 57285036 -83031729 - L2 LINE L2 -1 3271 3004 287 377 93 28 chr10 57285470 57285759 -83031006 + L3 LINE CR1 1149 1456 -121 1786 204 61 40 chr10 57286191 57286686 -83030079 - MLT1D LTR MaLR 0 505 1 349 229 0 0 chr10 57286707 57286768 -83029997 - Tigger5 DNA MER2_type -2261 62 2 22 0 0 0 chr10 57286904 57286926 -83029839 + AT_rich Low_complexity Low_complexity 1 22 0 363 181 0 0 chr10 57288006 57288078 -83028687 + CT-rich Low_complexity Low_complexity 1 72 0 2078 105 31 0 chr10 57288083 57288377 -83028388 - AluSc SINE Alu -2 307 5 1723 156 135 18 chr10 57288521 57288848 -83027917 - MER47A DNA MER2_type 0 366 2 245 300 90 0 chr10 57291848 57291948 -83024817 - HAL1 LINE L1 -794 1713 1605 308 146 0 0 chr10 57291982 57292037 -83024728 + L1MA2 LINE L1 6246 6300 -4 21 71 0 0 chr10 57292039 57292081 -83024684 + AT_rich Low_complexity Low_complexity 1 42 0 2122 115 10 0 chr10 57292323 57292628 -83024137 - AluY SINE Alu -3 308 1 346 271 58 102 chr10 57292686 57292981 -83023784 - HAL1 LINE L1 -1345 1162 881 330 287 0 11 chr10 57293908 57294002 -83022763 - L2 LINE L2 0 3313 3221 275 343 91 25 chr10 57294487 57294729 -83022036 + MIR SINE MIR 3 260 -2 807 332 65 12 chr10 57295251 57295576 -83021189 - MLT1I LTR MaLR 0 409 68 210 297 0 40 chr10 57295658 57295732 -83021033 - MIR SINE MIR -54 208 138 8759 194 68 49 chr10 57295753 57297801 -83018964 + L1M3 LINE L1 7 2014 -4370 2263 97 3 0 chr10 57297801 57298100 -83018665 + AluY SINE Alu 1 300 -11 8759 194 68 49 chr10 57298100 57298341 -83018424 + L1M3 LINE L1 2014 2249 -4135 1764 188 51 10 chr10 57298341 57298734 -83018031 - L1MA5 LINE L1 0 6300 5892 8759 194 68 49 chr10 57298734 57298792 -83017973 + L1M3 LINE L1 2249 2304 -4080 1988 211 44 0 chr10 57298792 57299200 -83017565 + MSTB LTR MaLR 1 426 0 8759 194 68 49 chr10 57299200 57299292 -83017473 + L1M3 LINE L1 2304 2495 -3889 1329 183 25 19 chr10 57299285 57299735 -83017030 + L1M3 LINE L1 5318 5773 -646 * 516 243 27 0 chr10 57299806 57299917 -83016848 + Ricksha DNA DNA 2 115 -1066 1063 171 20 5 chr10 57299933 57300132 -83016633 + Ricksha DNA DNA 241 442 -2804 * 4359 157 17 17 chr10 57300115 57300948 -83015817 + Ricksha DNA DNA 2357 3189 -57 22 35 0 0 chr10 57301615 57301644 -83015121 + AT_rich Low_complexity Low_complexity 1 29 0 1661 190 3 0 chr10 57302495 57302821 -83013944 - L1MA4 LINE L1 -7 6293 5967 87 52 0 0 chr10 57303126 57303262 -83013503 + AT_rich Low_complexity Low_complexity 1 136 0 500 300 88 6 chr10 57303805 57303975 -83012790 - MIR SINE MIR -26 236 53 354 297 20 29 chr10 57303955 57304094 -83012671 + MIR SINE MIR 10 147 -61 * 2241 47 61 0 chr10 57304568 57304846 -83011919 - AluY SINE Alu -16 295 1 649 188 49 0 chr10 57305284 57305428 -83011337 - HSMAR2 DNA Mariner -2 1300 1150 254 111 0 0 chr10 57305442 57305478 -83011287 + AluSc SINE Alu 37 72 -227 1463 23 0 0 chr10 57305478 57305651 -83011114 + L1PA2 LINE L1 5982 6154 -1 1738 88 4 0 chr10 57305651 57305877 -83010888 + AluSc SINE Alu 71 297 -12 6629 155 10 22 chr10 57305877 57307046 -83009719 - HSMAR2 DNA Mariner -145 1157 3 183 286 0 0 chr10 57307142 57307177 -83009588 + MER5A DNA MER1_type 152 186 -3 26 0 0 0 chr10 57307313 57307339 -83009426 + AT_rich Low_complexity Low_complexity 1 26 0 3208 186 89 40 chr10 57307352 57308108 -83008657 - MER54B LTR ERVL 0 793 1 387 270 90 0 chr10 57308126 57308237 -83008528 - MIR SINE MIR -70 192 72 189 426 17 0 chr10 57308340 57308455 -83008310 + MIR SINE MIR 19 135 -73 292 309 110 0 chr10 57308482 57308644 -83008121 - MLT1J2 LTR MaLR 0 446 268 424 229 9 19 chr10 57308736 57308841 -83007924 - MLT1J2 LTR MaLR -317 133 30 22 35 0 0 chr10 57309287 57309316 -83007449 + AT_rich Low_complexity Low_complexity 1 29 0 8632 199 66 7 chr10 57310534 57312361 -83004404 - L1M2c LINE L1 -4855 2711 6 204 159 23 0 chr10 57312776 57312820 -83003945 + A-rich Low_complexity Low_complexity 3 47 0 5014 176 59 6 chr10 57312849 57313875 -83002890 - L1MA3 LINE L1 0 6305 5227 21 0 0 0 chr10 57314645 57314666 -83002099 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr10 57314955 57314991 -83001774 + (TG)n Simple_repeat Simple_repeat 1 36 0 2271 110 0 0 chr10 57315137 57315438 -83001327 - AluSq SINE Alu -12 301 1 372 363 44 12 chr10 57315589 57315749 -83001016 + L2 LINE L2 2864 3028 -285 25 31 0 0 chr10 57316819 57316851 -82999914 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 57317039 57317063 -82999702 + AT_rich Low_complexity Low_complexity 1 24 0 396 351 69 37 chr10 57317861 57318211 -82998554 - L3 LINE CR1 -189 1388 1028 324 359 45 14 chr10 57318585 57318808 -82997957 + L2 LINE L2 2306 2535 -779 6540 168 37 16 chr10 57319077 57320352 -82996413 + HSMAR2 DNA Mariner 2 1302 0 638 270 5 24 chr10 57320717 57320913 -82995852 + MLT1G1 LTR MaLR 245 367 -175 278 338 0 0 chr10 57321133 57321207 -82995558 + L2 LINE L2 3230 3303 -10 2510 95 25 5 chr10 57321716 57322084 -82994681 - THE1C LTR MaLR 0 375 1 375 23 0 0 chr10 57322275 57322319 -82994446 + (TG)n Simple_repeat Simple_repeat 2 45 0 785 305 81 48 chr10 57323031 57323513 -82993252 + L1PB4 LINE L1 2 499 -6350 1627 230 45 108 chr10 57323534 57323666 -82993099 + LTR9 LTR ERV1 1 140 -472 2491 74 0 3 chr10 57323666 57323976 -82992789 + AluSg SINE Alu 1 309 -1 1627 230 45 108 chr10 57323976 57324388 -82992377 + LTR9 LTR ERV1 140 502 -110 1902 119 30 10 chr10 57324388 57324690 -82992075 - AluSq SINE Alu -5 308 1 1627 230 45 108 chr10 57324690 57324783 -82991982 + LTR9 LTR ERV1 502 599 -13 267 344 94 33 chr10 57324850 57325094 -82991671 + L1PB4 LINE L1 698 956 -5893 4742 67 21 5 chr10 57325369 57326383 -82990382 + MER11A LTR ERVK 1 1266 0 836 286 15 8 chr10 57326935 57327194 -82989571 + L1PA15-16 LINE L1 2659 2919 -3930 12093 232 30 27 chr10 57327202 57327600 -82989165 + L1PB4 LINE L1 1477 1873 -5132 261 0 0 0 chr10 57327600 57327629 -82989136 + (TA)n Simple_repeat Simple_repeat 1 29 0 12093 232 30 27 chr10 57327629 57331849 -82984916 + L1PB4 LINE L1 1873 6082 -923 201 39 0 0 chr10 57331849 57331875 -82984890 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 12093 232 30 27 chr10 57331875 57331960 -82984805 + L1PB4 LINE L1 6082 6165 -840 1955 119 0 0 chr10 57331960 57332220 -82984545 + AluSx SINE Alu 32 291 -21 207 0 0 0 chr10 57332226 57332249 -82984516 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 12093 232 30 27 chr10 57332249 57332460 -82984305 + L1PB4 LINE L1 6169 6488 -517 1254 131 0 0 chr10 57332460 57332636 -82984129 + AluSg/x SINE Alu 125 300 -12 945 183 24 0 chr10 57332636 57332805 -82983960 + L1PB4 LINE L1 6672 6844 -14 4545 174 16 0 chr10 57332829 57333620 -82983145 - Tigger1 DNA MER2_type -186 2232 1429 571 270 39 6 chr10 57333598 57333776 -82982989 - Tigger1 DNA MER2_type -2234 184 1 * 190 388 0 0 chr10 57334932 57335012 -82981753 + L2 LINE L2 3230 3309 -4 310 282 128 19 chr10 57335040 57335196 -82981569 + L2 LINE L2 3000 3172 -141 584 270 8 124 chr10 57335421 57335680 -82981085 + MIR SINE MIR 28 256 -6 2166 128 10 0 chr10 57336350 57336654 -82980111 - AluSx SINE Alu -5 307 1 27 62 0 0 chr10 57336940 57336988 -82979777 + AT_rich Low_complexity Low_complexity 1 48 0 459 304 30 61 chr10 57337983 57338279 -82978486 + L1MEd LINE L1 255 541 -5831 36 82 0 0 chr10 57339775 57339860 -82976905 + AT_rich Low_complexity Low_complexity 1 85 0 29 60 0 0 chr10 57340072 57340122 -82976643 + AT_rich Low_complexity Low_complexity 1 50 0 1062 154 72 0 chr10 57340406 57340499 -82976266 + L1MA7 LINE L1 6054 6139 -152 303 28 0 0 chr10 57340499 57340535 -82976230 + (CA)n Simple_repeat Simple_repeat 1 36 0 1062 154 72 0 chr10 57340535 57340662 -82976103 + L1MA7 LINE L1 6139 6290 -1 330 26 0 0 chr10 57340669 57340708 -82976057 + (CA)n Simple_repeat Simple_repeat 2 40 0 2162 132 27 21 chr10 57342067 57342439 -82974326 - THE1C LTR MaLR -1 374 1 280 251 1 37 chr10 57343462 57343549 -82973216 + MER58 DNA MER1_type 128 2418 -2 376 329 112 40 chr10 57343564 57343911 -82972854 + L1MEd LINE L1 1265 1636 -4748 280 252 115 12 chr10 57344272 57344456 -82972309 + L1MEd LINE L1 2374 2548 -3834 520 305 94 52 chr10 57344587 57346171 -82970594 + L1MEd LINE L1 2594 4270 -2112 1773 166 0 7 chr10 57346171 57346489 -82970276 + AluSx SINE Alu 1 316 0 520 305 94 52 chr10 57346489 57346768 -82969997 + L1MEd LINE L1 4270 4536 -1846 195 42 0 0 chr10 57346897 57346921 -82969844 + (CA)n Simple_repeat Simple_repeat 1 24 0 557 244 95 12 chr10 57346984 57347152 -82969613 + MER101 LTR ERV1 236 417 -57 203 239 22 0 chr10 57347452 57347498 -82969267 + L2 LINE L2 3226 3272 0 1541 210 95 16 chr10 57347825 57348192 -82968573 + MSTD LTR MaLR 1 396 0 385 289 0 0 chr10 57348668 57348744 -82968021 - HERV16 LTR ERVL -4864 132 57 1330 209 111 67 chr10 57348807 57349286 -82967479 + MLT1D LTR MaLR 1 500 -5 618 287 82 56 chr10 57349362 57349703 -82967062 - LTR16A1 LTR ERVL -65 392 43 222 295 194 23 chr10 57349717 57349846 -82966919 + MIR SINE MIR 38 188 -74 443 281 58 115 chr10 57349933 57350349 -82966416 + MLT1J2 LTR MaLR 20 411 -39 443 307 108 30 chr10 57350563 57350794 -82965971 - MIR SINE MIR 0 262 14 232 343 19 37 chr10 57350815 57350923 -82965842 + MIR SINE MIR 19 124 -84 229 25 0 50 chr10 57351584 57351624 -82965141 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2021 119 0 0 chr10 57351626 57351904 -82964861 - AluSx SINE Alu -30 282 5 22 0 0 0 chr10 57351997 57352019 -82964746 + AT_rich Low_complexity Low_complexity 1 22 0 183 80 0 0 chr10 57352095 57352120 -82964645 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 22 80 0 0 chr10 57352542 57352592 -82964173 + AT_rich Low_complexity Low_complexity 1 50 0 1237 171 16 82 chr10 57353415 57353719 -82963046 - L1MA10 LINE L1 -11 6323 6040 253 115 16 16 chr10 57353721 57353782 -82962983 + (TA)n Simple_repeat Simple_repeat 2 62 0 245 228 0 18 chr10 57353827 57353884 -82962881 + L1MC4 LINE L1 6658 6713 -1329 * 2803 172 23 91 chr10 57353876 57354601 -82962164 - L1MA10 LINE L1 -301 5990 5315 1772 189 20 56 chr10 57354602 57355046 -82961719 - L1MA6 LINE L1 0 6300 5873 1168 244 26 11 chr10 57355050 57355431 -82961334 - L1MA10 LINE L1 -824 5322 4936 * 2054 215 22 11 chr10 57355428 57355888 -82960877 + L1MA10 LINE L1 4448 4912 -1234 6096 208 28 50 chr10 57357033 57358599 -82958166 + Tigger5 DNA MER2_type 613 2143 -180 865 284 53 46 chr10 57358887 57360128 -82956637 - L1M4 LINE L1 -879 5267 3947 998 232 54 48 chr10 57360189 57360693 -82956072 + L1M4 LINE L1 2375 2881 -3265 507 253 64 30 chr10 57360693 57360958 -82955807 - L1M4 LINE L1 -3733 2413 2140 251 279 12 23 chr10 57361055 57361141 -82955624 - MLT1-int LTR MaLR -1279 92 8 408 291 26 7 chr10 57361146 57361297 -82955468 - MLT2E LTR ERVL -3 625 472 1628 56 0 0 chr10 57361493 57361690 -82955075 + AluY SINE Alu 106 302 -9 2909 96 38 22 chr10 57362289 57362735 -82954030 - MLT2A2 LTR ERVL 0 453 1 391 287 10 0 chr10 57363224 57363325 -82953440 - MIR SINE MIR -11 251 150 32 43 0 0 chr10 57364680 57364726 -82952039 + AT_rich Low_complexity Low_complexity 1 46 0 188 269 0 45 chr10 57365450 57365517 -82951248 + MIR SINE MIR 148 211 -51 197 296 56 0 chr10 57366018 57366072 -82950693 - L2 LINE L2 -4 3268 3212 813 281 95 56 chr10 57366164 57366595 -82950170 - LTR16A1 LTR ERVL -7 450 3 407 299 91 13 chr10 57366758 57366912 -82949853 - MIR SINE MIR -27 235 70 1388 231 3 7 chr10 57367906 57368205 -82948560 + AluJb SINE Alu 1 298 -14 822 307 37 40 chr10 57368617 57368943 -82947822 + MLT1I LTR MaLR 85 409 0 307 152 65 120 chr10 57369711 57369801 -82946964 - MLT2C2 LTR ERVL 0 464 380 779 203 87 98 chr10 57369801 57370077 -82946688 + MLT1A1 LTR MaLR 1 273 -92 277 272 37 37 chr10 57370831 57370968 -82945797 - L1MCa LINE L1 -6002 922 299 605 311 72 35 chr10 57371227 57372362 -82944403 + L1ME3 LINE L1 2680 3856 -2290 * 4214 26 0 0 chr10 57372358 57372887 -82943878 - L1P LINE L1 -2641 3505 2977 3377 27 2 0 chr10 57372887 57373285 -82943480 + L1PA3 LINE L1 5744 6147 -8 216 0 0 0 chr10 57373289 57373313 -82943452 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 239 261 96 75 chr10 57373363 57373643 -82943122 + L1ME3 LINE L1 3903 4188 -1958 502 79 59 10 chr10 57373643 57373744 -82943021 + GA-rich Low_complexity Low_complexity 5 110 0 929 276 93 46 chr10 57373756 57374296 -82942469 + L1ME3 LINE L1 5596 6160 -2 877 92 0 8 chr10 57374306 57374437 -82942328 + L1PA7 LINE L1 6025 6154 0 1718 189 82 39 chr10 57375038 57375476 -82941289 + MER31B LTR ERV1 1 457 -9 26 30 0 0 chr10 57375506 57375539 -82941226 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 57376020 57376064 -82940701 + AT_rich Low_complexity Low_complexity 1 44 0 399 253 6 121 chr10 57376230 57376412 -82940353 - MIR SINE MIR -49 213 53 369 342 14 14 chr10 57377926 57378119 -82938646 - MIR3 SINE MIR -11 197 3 22 0 0 0 chr10 57379541 57379563 -82937202 + AT_rich Low_complexity Low_complexity 1 22 0 1721 64 17 30 chr10 57380268 57380504 -82936261 + AluY SINE Alu 67 299 -12 245 197 84 0 chr10 57381226 57381294 -82935471 + MIR SINE MIR 40 118 -90 322 128 23 93 chr10 57382511 57382597 -82934168 + MER50 LTR ERV1 7 86 -648 3807 155 8 9 chr10 57382638 57383272 -82933493 + MER50 LTR ERV1 79 711 -23 361 316 154 14 chr10 57383817 57384102 -82932663 + L1MC4 LINE L1 7445 7769 -273 277 215 15 0 chr10 57384123 57384188 -82932577 + MLT1H LTR MaLR 481 546 -3 339 307 20 0 chr10 57384338 57384439 -82932326 - L2 LINE L2 -6 3307 3205 363 298 16 0 chr10 57384813 57384934 -82931831 - L1MC5 LINE L1 -524 7437 7315 3840 77 8 0 chr10 57385245 57385766 -82930999 + L1P3 LINE L1 1097 1621 -4840 3320 65 5 13 chr10 57385766 57386240 -82930525 + L1PA7 LINE L1 5708 6154 0 302 341 62 28 chr10 57386493 57386672 -82930093 + MIR SINE MIR 5 189 -73 21 0 0 0 chr10 57388079 57388100 -82928665 + AT_rich Low_complexity Low_complexity 1 21 0 3151 42 0 0 chr10 57388544 57388926 -82927839 + L1PA5 LINE L1 5758 6139 -15 189 0 0 0 chr10 57388926 57388947 -82927818 + (TA)n Simple_repeat Simple_repeat 2 22 0 1518 204 53 35 chr10 57389255 57389686 -82927079 + LTR47B LTR ERVL 3 441 -2 200 350 62 12 chr10 57389688 57389848 -82926917 - MIR SINE MIR -2 260 93 272 288 110 42 chr10 57389886 57390077 -82926688 + MLT1H LTR MaLR 96 299 -250 1852 82 12 0 chr10 57390095 57390352 -82926413 - L1PA8 LINE L1 -1 6171 5912 234 213 118 79 chr10 57491903 57492030 -82824735 + MLT1J2 LTR MaLR 1 132 -318 2943 64 3 0 chr10 57493179 57493541 -82823224 - L1P3 LINE L1 -435 5719 5354 2721 70 6 0 chr10 57493541 57493896 -82822869 + L1PA7 LINE L1 5795 6151 -3 2943 64 3 0 chr10 57493896 57493907 -82822858 - L1P3 LINE L1 -800 5354 5345 8218 83 15 6 chr10 57494277 57495373 -82821392 + HERVL-A1 LTR ERVL 4549 5654 0 2785 92 41 13 chr10 57495373 57495766 -82820999 + MLT2A1 LTR ERVL 1 404 -40 468 70 84 0 chr10 57495778 57495920 -82820845 + (TA)n Simple_repeat Simple_repeat 1 154 0 311 143 9 0 chr10 57495920 57495982 -82820783 + MLT2A1 LTR ERVL 392 444 0 * 580 235 142 0 chr10 57495982 57496141 -82820624 + LTR8A LTR ERV1 546 727 0 21 57 0 0 chr10 57496180 57496215 -82820550 + AT_rich Low_complexity Low_complexity 1 35 0 192 152 0 0 chr10 57496393 57496426 -82820339 + (TAA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 57496934 57496964 -82819801 + AT_rich Low_complexity Low_complexity 1 30 0 330 67 0 0 chr10 57497131 57497176 -82819589 + (CA)n Simple_repeat Simple_repeat 2 46 0 186 150 0 0 chr10 57497472 57497512 -82819253 + (TG)n Simple_repeat Simple_repeat 2 41 0 1367 205 129 18 chr10 57497526 57498036 -82818729 + MER67C LTR ERV1 1 514 0 1253 215 98 23 chr10 57498317 57498624 -82818141 - MER2 DNA MER2_type -5 340 11 324 295 91 62 chr10 57498718 57498959 -82817806 + MIR SINE MIR 2 249 -13 187 216 34 57 chr10 57498931 57499019 -82817746 - MER5C DNA MER1_type -59 265 180 * 730 276 190 5 chr10 57499997 57500428 -82816337 + L1M4c LINE L1 1061 1571 -4813 7240 180 23 23 chr10 57500433 57501736 -82815029 + L1MA3 LINE L1 137 1439 -6126 13921 174 26 16 chr10 57501741 57505250 -82811515 + L1MA3 LINE L1 2319 5907 -1817 1529 211 13 13 chr10 57505250 57505562 -82811203 + AluSx SINE Alu 1 312 0 13921 174 26 16 chr10 57505562 57507400 -82809365 + L1MA3 LINE L1 5907 7724 0 4002 240 49 30 chr10 57507415 57508662 -82808103 - L1M4 LINE L1 -5258 1284 15 1672 185 27 3 chr10 57508690 57509019 -82807746 - L1MA4 LINE L1 -191 6109 5773 269 348 27 27 chr10 57509074 57509258 -82807507 + L1ME LINE L1 5626 5809 -361 40 67 0 0 chr10 57509318 57509393 -82807372 + AT_rich Low_complexity Low_complexity 1 75 0 1138 241 54 48 chr10 57509905 57510365 -82806400 - L1ME1 LINE L1 -5 6161 5699 667 235 70 20 chr10 57510372 57510572 -82806193 - L1ME1 LINE L1 -617 5549 5340 336 64 0 0 chr10 57511783 57511830 -82804935 + (CA)n Simple_repeat Simple_repeat 1 47 0 184 397 89 28 chr10 57511833 57512012 -82804753 + L3 LINE CR1 1384 1573 -4 23 0 0 0 chr10 57512086 57512109 -82804656 + AT_rich Low_complexity Low_complexity 1 23 0 1163 234 29 26 chr10 57512581 57512797 -82803968 + L1ME2 LINE L1 5453 5672 -492 985 172 11 0 chr10 57512797 57512983 -82803782 + L1MB4 LINE L1 5993 6180 0 1163 234 29 26 chr10 57512983 57513078 -82803687 + L1ME2 LINE L1 5672 5765 -399 949 192 12 12 chr10 57513073 57513398 -82803367 + L1MA4A LINE L1 5895 6280 -23 * 384 253 21 0 chr10 57513464 57513559 -82803206 + MER58 DNA MER1_type 2 98 -117 344 123 0 15 chr10 57513594 57513659 -82803106 + (CA)n Simple_repeat Simple_repeat 1 64 0 507 167 76 15 chr10 57513759 57513891 -82802874 + L1ME2 LINE L1 5808 5947 -217 * 812 215 90 50 chr10 57513889 57514168 -82802597 + L1MC4 LINE L1 7360 7649 -393 2364 98 0 0 chr10 57514324 57514619 -82802146 + AluSc SINE Alu 1 295 -14 323 192 26 26 chr10 57515505 57515583 -82801182 - L1MC4 LINE L1 -1351 6691 6614 2147 104 0 14 chr10 57516440 57516737 -82800028 + AluSg SINE Alu 1 293 -17 180 309 82 36 chr10 57517225 57517335 -82799430 + L3 LINE CR1 1212 1326 -251 2387 74 0 3 chr10 57518262 57518560 -82798205 + AluY SINE Alu 1 297 -14 751 219 25 74 chr10 57518699 57518778 -82797987 + L1PA15 LINE L1 8 89 -7492 2193 124 0 0 chr10 57518778 57519077 -82797688 - AluSq SINE Alu -12 301 3 751 219 25 74 chr10 57519077 57519239 -82797526 + L1PA15 LINE L1 89 237 -7344 517 138 0 0 chr10 57519242 57519322 -82797443 - MSTA LTR MaLR -348 80 1 9132 156 10 31 chr10 57519322 57520934 -82795831 - MSTA-int LTR MaLR 0 1580 3 1846 147 155 16 chr10 57520938 57521313 -82795452 - MSTA LTR MaLR -1 427 1 13441 213 37 14 chr10 57521318 57524697 -82792068 + L1PA15 LINE L1 3267 6766 -837 2167 109 3 0 chr10 57524697 57525013 -82791752 + AluSp SINE Alu 1 317 0 13441 213 37 14 chr10 57525013 57525489 -82791276 + L1PA15 LINE L1 6766 7229 -374 259 250 0 22 chr10 57525484 57525576 -82791189 - L1MC4 LINE L1 -1339 6703 6614 * 221 136 0 23 chr10 57525576 57525620 -82791145 + (TA)n Simple_repeat Simple_repeat 2 44 0 1423 103 5 15 chr10 57525660 57525855 -82790910 + AluSc SINE Alu 1 193 -116 180 111 0 0 chr10 57525855 57525882 -82790883 + (A)n Simple_repeat Simple_repeat 1 27 0 1836 167 8 37 chr10 57525883 57525924 -82790841 + L1PA15 LINE L1 7253 7294 -309 2185 113 0 0 chr10 57525924 57526215 -82790550 + AluSx SINE Alu 1 291 -21 1836 167 8 37 chr10 57526215 57526526 -82790239 + L1PA15 LINE L1 7294 7595 -8 22 0 0 0 chr10 57526758 57526780 -82789985 + AT_rich Low_complexity Low_complexity 1 22 0 198 338 25 12 chr10 57527553 57527633 -82789132 + L2 LINE L2 3187 3267 -5 270 317 45 40 chr10 57527682 57527906 -82788859 - MLT1J LTR MaLR 0 511 287 1338 200 7 32 chr10 57528497 57528777 -82787988 - AluJo SINE Alu -19 293 21 1416 249 52 6 chr10 57529394 57529743 -82787022 + MLT1A1 LTR MaLR 1 365 0 195 42 0 0 chr10 57529907 57529931 -82786834 + (TA)n Simple_repeat Simple_repeat 1 24 0 226 196 76 43 chr10 57529938 57530030 -82786735 - L1MC3 LINE L1 -1139 6646 6552 811 195 59 18 chr10 57530356 57530638 -82786127 - MLT1B LTR MaLR 0 374 1 21 0 0 0 chr10 57530658 57530679 -82786086 + AT_rich Low_complexity Low_complexity 1 21 0 566 277 73 96 chr10 57530775 57531308 -82785457 + MLT1G1 LTR MaLR 4 510 -32 3239 206 58 26 chr10 57531920 57532802 -82783963 + L1MA10 LINE L1 3434 4343 -1803 2303 61 7 3 chr10 57532811 57533108 -82783657 - AluY SINE Alu -13 298 1 589 164 0 23 chr10 57533269 57533397 -82783368 + GA-rich Low_complexity Low_complexity 3 127 0 324 238 91 56 chr10 57533420 57533651 -82783114 - L1ME4a LINE L1 -3 6118 5880 3078 239 82 4 chr10 57533655 57533986 -82782779 - L1MB7 LINE L1 -10 6174 5870 1651 187 37 0 chr10 57533986 57534286 -82782479 - AluJo SINE Alu -1 311 1 3078 239 82 4 chr10 57534286 57535399 -82781366 - L1MB7 LINE L1 -314 5870 4619 1117 240 53 9 chr10 57535740 57536077 -82780688 + L1MA10 LINE L1 4337 4688 -1458 3387 241 38 5 chr10 57536096 57536974 -82779791 - L1ME1 LINE L1 -6 6160 5254 3675 203 41 32 chr10 57536979 57538115 -82778650 + L1MA10 LINE L1 4691 5844 -490 2448 173 29 9 chr10 57538115 57538567 -82778198 - LOR1b LTR ERV1 0 461 1 3675 203 41 32 chr10 57538567 57538962 -82777803 + L1MA10 LINE L1 5844 6234 -100 275 168 0 196 chr10 57538964 57539037 -82777728 - L1MB1 LINE L1 -199 5969 5922 312 27 0 0 chr10 57539037 57539074 -82777691 + (TG)n Simple_repeat Simple_repeat 2 38 0 275 168 0 196 chr10 57539074 57539107 -82777658 - L1MB1 LINE L1 -246 5922 5884 22 0 0 0 chr10 57539111 57539133 -82777632 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr10 57539190 57539226 -82777539 + AT_rich Low_complexity Low_complexity 1 36 0 463 259 116 5 chr10 57540943 57541138 -82775627 + MIR SINE MIR 39 254 -8 183 284 104 45 chr10 57541583 57541717 -82775048 - L2 LINE L2 -20 3293 3152 228 170 0 19 chr10 57542639 57542692 -82774073 - L1M1 LINE L1 -396 5906 5855 1087 192 124 133 chr10 57542700 57542957 -82773808 - L1MC4 LINE L1 -1 8041 7783 1777 164 25 27 chr10 57542957 57543322 -82773443 - MER47A DNA MER2_type -1 365 2 1087 192 124 133 chr10 57543322 57543622 -82773143 - L1MC4 LINE L1 -259 7783 7489 * 4631 119 28 1 chr10 57543608 57544316 -82772449 - L1MA2 LINE L1 -240 7483 6757 * 11446 200 35 11 chr10 57544302 57546443 -82770322 - L1MA2 LINE L1 -1347 6218 3985 2076 131 20 0 chr10 57546443 57546749 -82770016 - AluSx SINE Alu 0 312 1 11446 200 35 11 chr10 57546749 57547516 -82769249 - L1MA2 LINE L1 -3580 3985 3238 282 162 176 0 chr10 57547530 57547598 -82769167 + MLT2F LTR ERVL 581 660 -3 21 0 0 0 chr10 57547632 57547653 -82769112 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 57547692 57547716 -82769049 + AT_rich Low_complexity Low_complexity 1 24 0 243 277 0 0 chr10 57548437 57548502 -82768263 + (TA)n Simple_repeat Simple_repeat 2 66 0 1159 241 8 0 chr10 57548502 57548738 -82768027 - MER8 DNA MER2_type 0 239 2 1270 261 24 60 chr10 57548745 57549213 -82767552 + MLT1D LTR MaLR 36 486 -19 409 268 32 8 chr10 57549937 57550060 -82766705 - L2 LINE L2 0 3313 3188 5171 25 0 2 chr10 57550386 57550991 -82765774 - L1PA3 LINE L1 -5 6150 5547 4862 21 0 0 chr10 57550991 57551555 -82765210 + L1P LINE L1 3766 4329 -1817 2241 64 3 14 chr10 57551555 57551852 -82764913 - AluY SINE Alu -17 294 1 189 0 0 0 chr10 57552123 57552144 -82764621 + (GA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr10 57552729 57552752 -82764013 + AT_rich Low_complexity Low_complexity 1 23 0 195 139 0 0 chr10 57554035 57554071 -82762694 + (CA)n Simple_repeat Simple_repeat 1 36 0 210 254 28 14 chr10 57554986 57555057 -82761708 + T-rich Low_complexity Low_complexity 4 75 0 3107 205 31 2 chr10 57555257 57555902 -82760863 - L1MB7 LINE L1 -41 6143 5480 1052 117 6 17 chr10 57555938 57556117 -82760648 - AluYa8 SINE Alu -8 302 126 250 153 34 0 chr10 57556161 57556220 -82760545 + CT-rich Low_complexity Low_complexity 2 62 0 1437 181 0 0 chr10 57556331 57556602 -82760163 - L1MA4 LINE L1 -9 6291 6021 244 289 46 99 chr10 57556625 57556777 -82759988 - MIR SINE MIR -108 154 11 463 352 87 5 chr10 57557218 57557437 -82759328 - MIR SINE MIR -14 248 12 945 214 0 10 chr10 57557598 57557799 -82758966 + AluJo SINE Alu 114 312 0 2159 122 19 32 chr10 57558111 57558480 -82758285 + THE1B LTR MaLR 1 364 0 24 53 0 0 chr10 57560503 57560541 -82756224 + AT_rich Low_complexity Low_complexity 1 38 0 548 293 29 38 chr10 57561068 57561307 -82755458 - LTR16B LTR ERVL -4 460 224 1955 119 0 7 chr10 57561539 57561817 -82754948 + AluSg SINE Alu 1 276 -34 233 233 41 0 chr10 57562652 57562725 -82754040 + T-rich Low_complexity Low_complexity 5 80 0 2401 150 3 0 chr10 57562850 57563224 -82753541 - THE1C LTR MaLR 0 375 1 378 42 0 0 chr10 57565042 57565090 -82751675 + (CA)n Simple_repeat Simple_repeat 2 49 0 1937 158 30 30 chr10 57565291 57565652 -82751113 - THE1C LTR MaLR 0 375 15 264 148 0 19 chr10 57565652 57565706 -82751059 + THE1-int LTR MaLR 1528 1580 0 8486 144 58 40 chr10 57565722 57567245 -82749520 - THE1C-int LTR MaLR -30 1550 1 2031 142 24 39 chr10 57567245 57567626 -82749139 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr10 57567631 57567661 -82749104 + AT_rich Low_complexity Low_complexity 1 30 0 225 0 0 0 chr10 57568190 57568215 -82748550 + (CA)n Simple_repeat Simple_repeat 1 25 0 258 32 0 0 chr10 57568277 57568308 -82748457 + (TTG)n Simple_repeat Simple_repeat 2 32 0 247 257 33 99 chr10 57568660 57568812 -82747953 + MIR SINE MIR 96 237 -25 496 223 157 48 chr10 57569185 57569351 -82747414 - MIR SINE MIR -1 261 78 270 253 109 67 chr10 57569816 57570490 -82746275 + L1MEc LINE L1 861 1433 -4782 * 660 282 28 12 chr10 57570478 57570801 -82745964 + L1M4 LINE L1 3608 3935 -2211 * 2829 219 58 38 chr10 57570783 57571574 -82745191 + L1MC3 LINE L1 6541 7347 -438 579 244 0 0 chr10 57571588 57571715 -82745050 + L1ME3A LINE L1 6027 6153 -17 1688 258 116 22 chr10 57572098 57572640 -82744125 - MLT1E LTR MaLR 0 593 1 320 157 11 34 chr10 57572645 57572734 -82744031 + GA-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr10 57573488 57573509 -82743256 + AT_rich Low_complexity Low_complexity 1 21 0 2186 126 0 0 chr10 57574484 57574793 -82741972 + AluSc SINE Alu 1 309 0 225 159 0 0 chr10 57574808 57574852 -82741913 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 349 233 8 8 chr10 57574910 57575043 -82741722 + (TA)n Simple_repeat Simple_repeat 1 133 0 192 77 0 0 chr10 57576019 57576045 -82740720 + (TA)n Simple_repeat Simple_repeat 1 26 0 4234 161 5 53 chr10 57576582 57577415 -82739350 + MER54B LTR ERVL 1 793 0 21 36 0 0 chr10 57577462 57577490 -82739275 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 57577515 57577536 -82739229 + AT_rich Low_complexity Low_complexity 1 21 0 262 336 107 29 chr10 57579300 57579440 -82737325 - MER5A DNA MER1_type -6 183 33 22 0 0 0 chr10 57580218 57580240 -82736525 + AT_rich Low_complexity Low_complexity 1 22 0 8931 209 112 18 chr10 57581300 57584754 -82732011 - L1MA4 LINE L1 -5 6937 3149 5526 270 108 16 chr10 57584764 57586585 -82730180 - L1MA4 LINE L1 -4795 1994 7 189 349 78 23 chr10 57586868 57586997 -82729768 + MIR SINE MIR 25 160 -102 449 113 0 0 chr10 57587286 57587348 -82729417 - MSTA LTR MaLR -2 426 365 2229 70 7 10 chr10 57588063 57588364 -82728401 + AluY SINE Alu 1 300 -11 336 64 0 0 chr10 57588741 57588788 -82727977 - L1PA15 LINE L1 -9 6156 6110 1410 204 103 37 chr10 57588869 57589305 -82727460 - MLT1C LTR MaLR 0 467 3 1402 233 22 17 chr10 57589364 57589725 -82727040 + MLT1A1 LTR MaLR 3 365 0 2028 148 3 0 chr10 57590187 57590498 -82726267 - AluSx SINE Alu 0 312 1 183 235 0 0 chr10 57590541 57590592 -82726173 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 23 33 0 0 chr10 57590834 57590864 -82725901 + AT_rich Low_complexity Low_complexity 1 30 0 1595 197 16 30 chr10 57591375 57591740 -82725025 - MLT1A1 LTR MaLR -1 364 5 1840 148 38 30 chr10 57591763 57592135 -82724630 + THE1C LTR MaLR 1 375 0 8856 137 37 48 chr10 57592135 57593732 -82723033 + THE1C-int LTR MaLR 1 1580 0 1877 144 43 35 chr10 57593732 57594101 -82722664 + THE1C LTR MaLR 1 372 -3 387 333 82 6 chr10 57594103 57594262 -82722503 + MIR SINE MIR 76 246 -16 2293 211 18 8 chr10 57595119 57595607 -82721158 - L1 LINE L1 -1069 5077 4585 1626 136 99 6 chr10 57595598 57595640 -82721125 + L1 LINE L1 4213 4250 -1896 * 318 26 0 0 chr10 57595640 57595679 -82721086 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1626 136 99 6 chr10 57595679 57595988 -82720777 + L1 LINE L1 4250 4597 -1549 521 281 72 90 chr10 57595992 57596220 -82720545 - L1 LINE L1 -1983 4163 3932 1810 137 11 18 chr10 57596220 57596534 -82720231 + AluSq SINE Alu 1 312 0 521 281 72 90 chr10 57596534 57597373 -82719392 - L1 LINE L1 -2214 3932 3079 1573 197 20 7 chr10 57597373 57597673 -82719092 - AluJo SINE Alu -8 304 1 521 281 72 90 chr10 57597673 57597820 -82718945 - L1 LINE L1 -3067 3079 2931 1506 196 7 4 chr10 57597820 57598101 -82718664 - AluJb SINE Alu -30 282 1 521 281 72 90 chr10 57598101 57598323 -82718442 - L1 LINE L1 -3215 2931 2750 440 359 12 6 chr10 57598331 57598501 -82718264 + MER45A DNA AcHobo 8 178 0 247 276 0 0 chr10 57600329 57600387 -82716378 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 27 100 0 0 chr10 57600817 57600907 -82715858 + AT_rich Low_complexity Low_complexity 1 90 0 1637 214 121 84 chr10 57601256 57602040 -82714725 + LTR1B LTR ERV1 1 813 -13 25 31 0 0 chr10 57602617 57602649 -82714116 + AT_rich Low_complexity Low_complexity 1 32 0 2288 87 0 0 chr10 57602714 57603002 -82713763 - AluSc SINE Alu -21 288 1 26 64 0 0 chr10 57603292 57603339 -82713426 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr10 57603417 57603438 -82713327 + AT_rich Low_complexity Low_complexity 1 21 0 3903 139 76 58 chr10 57604078 57605330 -82711435 + pTR5 LTR ERV1 743 2295 -143 477 295 108 50 chr10 57605342 57605723 -82711042 - LTR16A LTR ERVL -55 399 1 1918 231 18 2 chr10 57605908 57606306 -82710459 + LTR57 LTR ERVL 1 404 -7 487 363 12 17 chr10 57606979 57607219 -82709546 - MIR SINE MIR -22 240 2 1772 259 73 27 chr10 57608232 57608792 -82707973 + MER90 LTR ERV1 1 586 -28 192 77 0 0 chr10 57608873 57608899 -82707866 + (TA)n Simple_repeat Simple_repeat 1 26 0 23 97 0 0 chr10 57608914 57608986 -82707779 + AT_rich Low_complexity Low_complexity 1 72 0 1284 204 82 6 chr10 57609144 57609462 -82707303 + MER2 DNA MER2_type 1 342 -2 204 40 0 0 chr10 57609588 57609613 -82707152 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5401 144 51 16 chr10 57609701 57610528 -82706237 - L1PB1 LINE L1 0 6151 5271 198 0 0 0 chr10 57610528 57610550 -82706215 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5401 144 51 16 chr10 57610550 57611082 -82705683 - L1PB1 LINE L1 -880 5271 4759 22 70 0 0 chr10 57611087 57611130 -82705635 + AT_rich Low_complexity Low_complexity 1 43 0 35 0 0 0 chr10 57611236 57611271 -82705494 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 57612425 57612446 -82704319 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 57613447 57613485 -82703280 + AT_rich Low_complexity Low_complexity 1 38 0 182 210 90 100 chr10 57613780 57613880 -82702885 + MIR SINE MIR 110 208 -54 303 28 0 0 chr10 57614155 57614191 -82702574 + (TA)n Simple_repeat Simple_repeat 1 36 0 279 0 0 0 chr10 57614190 57614221 -82702544 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 1452 118 96 44 chr10 57615482 57615752 -82701013 + LTR12 LTR ERV1 1 284 -430 271 222 14 0 chr10 57615753 57615825 -82700940 + LTR30 LTR ERV1 552 624 -98 617 220 23 8 chr10 57615825 57615957 -82700808 + LTR12 LTR ERV1 359 492 -222 207 210 70 20 chr10 57616513 57616613 -82700152 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 450 310 15 45 chr10 57617879 57618079 -82698686 - L2 LINE L2 -2 3311 3118 228 229 0 0 chr10 57618092 57618140 -82698625 - LTR33 LTR ERVL 0 521 474 248 308 13 0 chr10 57618490 57618568 -82698197 - LTR33 LTR ERVL -442 79 1 184 368 32 11 chr10 57618842 57618937 -82697828 - L2 LINE L2 -618 2696 2600 624 307 96 55 chr10 57618981 57619440 -82697325 - L2 LINE L2 -710 2604 2127 21 57 0 0 chr10 57619891 57619926 -82696839 + AT_rich Low_complexity Low_complexity 1 35 0 1917 127 34 0 chr10 57620115 57620406 -82696359 - AluSx SINE Alu -11 301 1 938 186 157 0 chr10 57620550 57620760 -82696005 + LTR54B LTR ERV1 1 243 -255 399 71 0 18 chr10 57620761 57620817 -82695948 + L1MA4 LINE L1 5909 5963 -340 1509 194 25 0 chr10 57620896 57621221 -82695544 + L1MA4 LINE L1 5962 6294 -6 487 230 143 5 chr10 57621252 57621448 -82695317 + LTR54 LTR ERV1 287 509 -1 2503 43 3 0 chr10 57624286 57624589 -82692176 + AluY SINE Alu 2 305 -6 4240 147 29 1 chr10 57626033 57626770 -82689995 - L1MA5 LINE L1 -3 6297 5541 872 285 27 55 chr10 57626770 57627173 -82689592 - L1M4 LINE L1 -6135 407 16 8697 192 61 8 chr10 57627975 57630146 -82686619 + L1MA9 LINE L1 3245 5531 -769 3693 264 42 78 chr10 57630172 57632300 -82684465 + L1MB7 LINE L1 16 2126 -4520 1225 236 30 36 chr10 57632353 57632794 -82683971 + L1MB7 LINE L1 4826 5263 -1381 1208 228 39 18 chr10 57632781 57633114 -82683651 + L1MA9 LINE L1 5936 6275 -37 * 225 220 20 0 chr10 57633136 57633186 -82683579 + L1MB7 LINE L1 5233 5283 -1361 2608 198 28 64 chr10 57633407 57633639 -82683126 + L1MB7 LINE L1 5331 5570 -1112 4171 54 13 79 chr10 57633639 57634272 -82682493 - L1PA8 LINE L1 -3 6169 5579 2608 198 28 64 chr10 57634272 57635089 -82681676 + L1MB7 LINE L1 5570 6349 -333 1144 259 6 14 chr10 57635137 57635481 -82681284 + L1MB7 LINE L1 6342 6682 0 3105 11 6 0 chr10 57635960 57636317 -82680448 + L1PA2 LINE L1 5797 6155 0 28 29 0 0 chr10 57637559 57637594 -82679171 + AT_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr10 57637724 57637760 -82679005 + AT_rich Low_complexity Low_complexity 1 36 0 190 348 0 14 chr10 57637903 57637972 -82678793 + MER5A DNA MER1_type 83 150 -39 1444 88 65 5 chr10 57640092 57640307 -82676458 + MER30 DNA MER1_type 3 230 0 474 248 0 0 chr10 57640430 57640535 -82676230 + FLAM_A SINE Alu 1 105 -37 791 246 49 0 chr10 57640535 57640718 -82676047 + MER20 DNA MER1_type 4 195 -24 206 271 24 129 chr10 57640954 57641039 -82675726 + L2 LINE L2 3158 3233 -39 193 135 56 34 chr10 57641622 57641711 -82675054 + (TTATA)n Simple_repeat Simple_repeat 4 94 0 579 89 0 0 chr10 57641909 57641988 -82674777 + AluS SINE Alu 1 79 -234 291 299 8 17 chr10 57643010 57643127 -82673638 + L1MEc LINE L1 1535 1650 -4746 22 0 0 0 chr10 57643191 57643213 -82673552 + AT_rich Low_complexity Low_complexity 1 22 0 238 214 119 24 chr10 57643670 57643754 -82673011 + L1M4b LINE L1 29 120 -6739 360 342 68 8 chr10 57644959 57645196 -82671569 - MIR SINE MIR 0 262 12 21 0 0 0 chr10 57645331 57645352 -82671413 + AT_rich Low_complexity Low_complexity 1 21 0 918 266 83 75 chr10 57645353 57645884 -82670881 + L1ME2 LINE L1 5384 5918 -246 643 191 22 12 chr10 57645880 57646032 -82670733 - L1M2 LINE L1 -397 5771 5622 * 704 211 78 0 chr10 57646348 57646490 -82670275 + AluJb SINE Alu 142 294 -18 242 280 78 47 chr10 57646520 57646713 -82670052 - MLT1H1-int LTR MaLR -899 472 274 745 298 119 40 chr10 57646853 57647350 -82669415 - MLT1H1 LTR MaLR 0 555 20 2903 6 0 0 chr10 57647822 57648140 -82668625 - AluYb8 SINE Alu 0 318 1 358 286 91 10 chr10 57650566 57650765 -82666000 - L1ME4a LINE L1 -5 6116 5902 211 227 0 15 chr10 57650835 57650901 -82665864 + (TA)n Simple_repeat Simple_repeat 1 65 0 802 143 0 0 chr10 57651117 57651236 -82665529 - FLAM_C SINE Alu -24 119 1 362 331 71 38 chr10 57651237 57651503 -82665262 - L1M4 LINE L1 -1952 4194 3920 21 0 0 0 chr10 57651560 57651581 -82665184 + AT_rich Low_complexity Low_complexity 1 21 0 287 228 18 105 chr10 57651816 57651930 -82664835 - MER103 DNA DNA -58 108 5 229 213 118 79 chr10 57652580 57652707 -82664058 + MLT1J2 LTR MaLR 1 132 -318 435 314 39 13 chr10 57652832 57652988 -82663777 + MLT1J2 LTR MaLR 281 440 -10 24 32 0 0 chr10 57653483 57653514 -82663251 + AT_rich Low_complexity Low_complexity 1 31 0 2056 64 4 4 chr10 57653620 57653886 -82662879 - AluY SINE Alu -45 266 1 320 260 0 13 chr10 57654164 57654241 -82662524 + L1MD1 LINE L1 4006 4081 -2065 3819 230 68 28 chr10 57654265 57655460 -82661305 + L1MD1 LINE L1 4706 5970 -272 2137 121 0 0 chr10 57655460 57655758 -82661007 - AluSc SINE Alu -11 298 1 3819 230 68 28 chr10 57655758 57656042 -82660723 + L1MD1 LINE L1 5970 6241 -1 1790 170 56 19 chr10 57656231 57656607 -82660158 - MLT1B LTR MaLR 0 390 1 405 0 0 0 chr10 57656772 57656817 -82659948 + (CA)n Simple_repeat Simple_repeat 1 45 0 34 72 0 0 chr10 57657662 57657731 -82659034 + AT_rich Low_complexity Low_complexity 1 69 0 201 159 0 0 chr10 57657960 57658004 -82658761 + (CA)n Simple_repeat Simple_repeat 1 44 0 232 326 0 15 chr10 57658612 57658744 -82658021 + (TA)n Simple_repeat Simple_repeat 2 131 0 283 268 21 10 chr10 57658748 57658845 -82657920 + MER103 DNA DNA 20 117 -49 2223 124 6 6 chr10 57658924 57659263 -82657502 - L1PA11 LINE L1 0 6174 5836 1782 144 0 3 chr10 57659264 57659562 -82657203 + L1P LINE L1 3620 3916 -2230 232 320 77 19 chr10 57660273 57660429 -82656336 + MIR SINE MIR 23 187 -75 3664 194 104 25 chr10 57660627 57661414 -82655351 - MER21B LTR ERV1 -14 849 1 21 0 0 0 chr10 57662989 57663010 -82653755 + AT_rich Low_complexity Low_complexity 1 21 0 37 39 0 0 chr10 57663218 57663269 -82653496 + AT_rich Low_complexity Low_complexity 1 51 0 198 0 0 0 chr10 57663380 57663402 -82653363 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 635 305 27 22 chr10 57663607 57663787 -82652978 + LTR16A LTR ERVL 221 404 -46 2038 141 0 0 chr10 57663787 57664093 -82652672 - AluSx SINE Alu -6 306 1 635 305 27 22 chr10 57664093 57664135 -82652630 + LTR16A LTR ERVL 404 444 -6 1023 283 62 32 chr10 57664141 57664579 -82652186 + HERV16 LTR ERVL 1 451 -4545 743 11 11 0 chr10 57664580 57664673 -82652092 + L1PA4 LINE L1 6061 6154 -1 728 301 82 7 chr10 57664674 57664966 -82651799 + HERV16 LTR ERVL 463 776 -4220 676 350 45 10 chr10 57665014 57665589 -82651176 + HERV16 LTR ERVL 908 1547 -3449 233 368 113 0 chr10 57665682 57665815 -82650950 + LTR16A LTR ERVL 128 275 -175 493 333 32 16 chr10 57667827 57668016 -82648749 + MIR SINE MIR 27 218 -44 23 33 0 0 chr10 57669024 57669054 -82647711 + AT_rich Low_complexity Low_complexity 1 30 0 251 178 6 6 chr10 57669961 57670024 -82646741 - Alu SINE Alu -261 39 1 697 220 0 0 chr10 57670237 57670369 -82646396 - FLAM_A SINE Alu -1 132 1 1312 280 85 14 chr10 57671753 57672313 -82644452 + L1MC4a LINE L1 5311 5830 -1978 189 0 0 0 chr10 57672313 57672334 -82644431 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 357 24 0 0 chr10 57672333 57672375 -82644390 + (GA)n Simple_repeat Simple_repeat 2 43 0 1312 280 85 14 chr10 57672334 57672404 -82644361 + L1MC4a LINE L1 5830 5942 -1866 1131 200 97 54 chr10 57672619 57672989 -82643776 + MSTB1 LTR MaLR 8 396 0 28 71 0 0 chr10 57673774 57673830 -82642935 + AT_rich Low_complexity Low_complexity 1 56 0 315 285 0 47 chr10 57674766 57674938 -82641827 + G-rich Low_complexity Low_complexity 3 166 0 24 77 0 0 chr10 57676391 57676443 -82640322 + AT_rich Low_complexity Low_complexity 1 52 0 489 363 85 27 chr10 57677059 57677318 -82639447 + L2 LINE L2 2685 2958 -356 454 268 28 39 chr10 57677727 57677906 -82638859 - MLT1H LTR MaLR -357 192 16 304 328 112 8 chr10 57677989 57678123 -82638642 + L2 LINE L2 3161 3308 -5 2291 68 10 0 chr10 57678774 57679069 -82637696 - AluY SINE Alu -13 298 1 4124 116 122 139 chr10 57679202 57680532 -82636233 + pTR5 LTR ERV1 6 712 -2 1112 263 91 0 chr10 57680992 57681334 -82635431 + MLT1B LTR MaLR 15 387 -3 610 199 58 6 chr10 57682473 57682669 -82634096 + L1PA6 LINE L1 5865 6074 -81 23 33 0 0 chr10 57683395 57683425 -82633340 + AT_rich Low_complexity Low_complexity 1 30 0 220 234 14 20 chr10 57684043 57684195 -82632570 + CT-rich Low_complexity Low_complexity 1 150 0 402 235 6 19 chr10 57684243 57684405 -82632360 + CT-rich Low_complexity Low_complexity 2 161 0 2131 165 69 20 chr10 57685747 57686153 -82630612 - Tigger2a DNA MER2_type -1 433 8 247 254 68 0 chr10 57686100 57686159 -82630606 + MER8 DNA MER2_type 176 238 -1 * 589 315 145 45 chr10 57686449 57686954 -82629811 - MLT1H1 LTR MaLR 0 555 1 259 333 62 34 chr10 57687498 57687675 -82629090 - MIR SINE MIR -55 207 26 229 238 0 0 chr10 57687681 57687723 -82629042 - MLT1I LTR MaLR -6 403 362 641 316 39 42 chr10 57687756 57688063 -82628702 - MLT1I LTR MaLR -49 360 55 2514 129 26 19 chr10 57690568 57690993 -82625772 + MSTA LTR MaLR 1 428 0 191 316 11 53 chr10 57691006 57691101 -82625664 - MIR SINE MIR -94 168 78 337 303 45 109 chr10 57691122 57691675 -82625090 - L2 LINE L2 -4 3309 2795 21 57 0 0 chr10 57691675 57691710 -82625055 + AT_rich Low_complexity Low_complexity 1 35 0 3958 130 58 5 chr10 57693373 57694026 -82622739 - LTR12 LTR ERV1 0 688 1 748 243 38 45 chr10 57694102 57694394 -82622371 - pTR5 LTR ERV1 -1408 1030 741 868 188 62 24 chr10 57694763 57694899 -82621866 - MER20 DNA MER1_type 0 219 71 459 0 0 0 chr10 57694899 57694950 -82621815 + (CA)n Simple_repeat Simple_repeat 1 51 0 868 188 62 24 chr10 57694950 57695021 -82621744 - MER20 DNA MER1_type -148 71 4 31 26 0 0 chr10 57695542 57695580 -82621185 + AT_rich Low_complexity Low_complexity 1 38 0 189 147 0 0 chr10 57695647 57695681 -82621084 + (TG)n Simple_repeat Simple_repeat 2 35 0 939 158 6 6 chr10 57695787 57695945 -82620820 - MLT1D LTR MaLR -4 501 344 237 183 33 33 chr10 57695977 57696037 -82620728 - LTR9 LTR ERV1 -552 60 1 1258 205 11 8 chr10 57696037 57696320 -82620445 - HUERS-P3 LTR ERV1 0 8919 6828 749 182 28 11 chr10 57696607 57696783 -82619982 - HUERS-P3 LTR ERV1 -2453 2562 2384 440 254 0 9 chr10 57696778 57696888 -82619877 - HUERS-P3 LTR ERV1 -1937 6982 6874 * 1443 235 0 3 chr10 57696899 57697197 -82619568 - HUERS-P3 LTR ERV1 -2007 6912 6616 45 34 0 0 chr10 57697200 57697259 -82619506 + AT_rich Low_complexity Low_complexity 1 59 0 192 125 0 0 chr10 57697305 57697337 -82619428 + (TG)n Simple_repeat Simple_repeat 2 33 0 2622 176 5 5 chr10 57697352 57697789 -82618976 - HUERS-P3 LTR ERV1 -2321 6598 6162 * 4167 157 19 1 chr10 57697775 57698456 -82618309 - HUERS-P3 LTR ERV1 -3343 5576 4884 520 196 0 0 chr10 57698741 57698833 -82617932 - HUERS-P3 LTR ERV1 -4289 4630 4539 * 7765 184 19 18 chr10 57698826 57700827 -82615938 - HUERS-P3 LTR ERV1 -5314 2104 804 5001 97 13 1 chr10 57700827 57701507 -82615258 + LTR12 LTR ERV1 1 688 0 7765 184 19 18 chr10 57701507 57702069 -82614696 - HUERS-P3 LTR ERV1 -6614 804 244 357 164 60 0 chr10 57702063 57702130 -82614635 - HUERS-P3 LTR ERV1 -7323 95 25 * 262 246 29 14 chr10 57702165 57702234 -82614531 - LTR9 LTR ERV1 0 612 543 18655 210 49 4 chr10 57702593 57709028 -82607737 - L1PA8 LINE L1 -6 6817 1 219 139 0 0 chr10 57709979 57710015 -82606750 + (TA)n Simple_repeat Simple_repeat 2 37 0 514 184 64 24 chr10 57710217 57710342 -82606423 + LTR40a LTR ERVL 3 132 -387 21 36 0 0 chr10 57710407 57710435 -82606330 + AT_rich Low_complexity Low_complexity 1 28 0 420 264 196 23 chr10 57710778 57710998 -82605767 + MER102b DNA MER1_type 33 290 -51 231 320 41 0 chr10 57711060 57711157 -82605608 + L2 LINE L2 2668 2768 -546 43 20 0 0 chr10 57711157 57711207 -82605558 + AT_rich Low_complexity Low_complexity 1 50 0 298 353 58 53 chr10 57711207 57711397 -82605368 + L2 LINE L2 2778 2968 -346 265 360 34 7 chr10 57711447 57711594 -82605171 + L2 LINE L2 2654 2804 -510 352 108 215 0 chr10 57711716 57711781 -82604984 + MADE1 DNA Mariner 2 80 0 32 0 0 0 chr10 57711913 57711945 -82604820 + AT_rich Low_complexity Low_complexity 1 32 0 1435 87 5 0 chr10 57712246 57712441 -82604324 - MER107 DNA MER1_type -1 196 1 610 340 0 20 chr10 57712653 57712850 -82603915 - LTR40a LTR ERVL -142 377 185 9496 37 2 1 chr10 57712850 57714012 -82602753 - L1PA4 LINE L1 -1341 4805 3643 7583 31 0 0 chr10 57714012 57715346 -82601419 + L1PA4 LINE L1 4819 6152 -3 811 260 35 35 chr10 57716797 57717028 -82599737 + MIR SINE MIR 5 235 -27 1783 169 95 17 chr10 57717260 57717608 -82599157 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 57717612 57717633 -82599132 + AT_rich Low_complexity Low_complexity 1 21 0 180 158 0 0 chr10 57718273 57718311 -82598454 + (TTA)n Simple_repeat Simple_repeat 2 39 0 22 70 0 0 chr10 57720131 57720174 -82596591 + AT_rich Low_complexity Low_complexity 1 43 0 340 271 85 34 chr10 57720875 57720993 -82595772 - L2 LINE L2 0 3272 3149 261 167 0 0 chr10 57721597 57721645 -82595120 - L1MC4 LINE L1 0 8042 7995 346 284 30 12 chr10 57721646 57721815 -82594950 - L1MC4 LINE L1 -137 7905 7734 22 0 0 0 chr10 57721834 57721856 -82594909 + AT_rich Low_complexity Low_complexity 1 22 0 256 263 94 41 chr10 57721884 57722055 -82594710 + HAL1 LINE L1 1054 1233 -1274 23 33 0 0 chr10 57722457 57722487 -82594278 + AT_rich Low_complexity Low_complexity 1 30 0 1446 257 53 28 chr10 57722847 57723455 -82593310 + HAL1 LINE L1 1885 2507 0 1543 156 35 57 chr10 57724991 57725273 -82591492 - AluJo SINE Alu -31 281 6 431 277 34 8 chr10 57725733 57725852 -82590913 + MLT1H LTR MaLR 41 162 -387 371 289 24 60 chr10 57725993 57726159 -82590606 + MLT1H LTR MaLR 378 531 -18 24 85 0 0 chr10 57726806 57726865 -82589900 + AT_rich Low_complexity Low_complexity 1 59 0 186 381 25 17 chr10 57727972 57728090 -82588675 + MIR SINE MIR 33 151 -57 1027 230 64 58 chr10 57728161 57728504 -82588261 - MER2 DNA MER2_type 0 345 1 389 269 39 0 chr10 57728516 57728620 -82588145 - MIR SINE MIR -73 189 82 445 342 105 0 chr10 57729703 57729893 -82586872 - MIR SINE MIR -41 221 12 218 247 11 22 chr10 57729997 57730059 -82586706 + (TA)n Simple_repeat Simple_repeat 2 64 -25 7485 143 24 7 chr10 57730059 57731335 -82585430 + HSMAR2 DNA Mariner 4 1301 -1 218 247 11 22 chr10 57731335 57731361 -82585404 + (TA)n Simple_repeat Simple_repeat 64 89 0 211 298 18 0 chr10 57731961 57732018 -82584747 + MIR SINE MIR 89 146 -62 934 226 140 39 chr10 57732656 57733014 -82583751 - MSTD LTR MaLR 0 396 3 206 219 0 0 chr10 57733043 57733084 -82583681 + (CA)n Simple_repeat Simple_repeat 2 42 0 352 97 32 0 chr10 57733085 57733147 -82583618 + GA-rich Low_complexity Low_complexity 2 65 0 717 301 46 59 chr10 57733214 57733706 -82583059 + MER115 DNA AcHobo 136 670 -23 184 114 0 0 chr10 57734467 57734502 -82582263 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 2279 67 0 3 chr10 57734502 57734787 -82581978 - AluY SINE Alu -27 284 1 191 363 29 20 chr10 57735245 57735347 -82581418 + L3 LINE CR1 1467 1569 -8 228 86 0 0 chr10 57735380 57735415 -82581350 + (CA)n Simple_repeat Simple_repeat 1 35 0 307 261 0 14 chr10 57736313 57736382 -82580383 + L1MC3 LINE L1 7088 7155 -630 4540 161 59 3 chr10 57736417 57737244 -82579521 + L1PB4 LINE L1 4935 5840 -316 261 83 0 0 chr10 57737244 57737280 -82579485 + (CA)n Simple_repeat Simple_repeat 2 37 0 4540 161 59 3 chr10 57737280 57737616 -82579149 + L1PB4 LINE L1 5840 6156 0 1871 193 28 28 chr10 57737612 57737626 -82579139 + L1MC3 LINE L1 7198 7211 -574 * 215 79 26 0 chr10 57737626 57737664 -82579101 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 1871 193 28 28 chr10 57737664 57738080 -82578685 + L1MC3 LINE L1 7210 7628 -157 207 0 0 0 chr10 57738242 57738265 -82578500 + (A)n Simple_repeat Simple_repeat 1 23 0 1026 140 117 17 chr10 57738507 57738686 -82578079 + MSTA LTR MaLR 232 428 0 198 118 0 0 chr10 57739117 57739151 -82577614 + (A)n Simple_repeat Simple_repeat 1 34 0 2259 104 0 0 chr10 57739220 57739528 -82577237 - AluY SINE Alu -3 308 1 2170 112 3 3 chr10 57739728 57740023 -82576742 - AluSg SINE Alu -15 295 1 1405 246 121 59 chr10 57741414 57741945 -82574820 - MLT1E2 LTR MaLR 0 624 39 502 246 16 93 chr10 57744131 57744314 -82572451 + MIR SINE MIR 84 252 -10 196 192 164 27 chr10 57744351 57744424 -82572341 + L2 LINE L2 2708 2790 -524 2291 178 64 43 chr10 57744457 57744941 -82571824 - MLT2B2 LTR ERVL -19 496 3 263 240 120 24 chr10 57745028 57745153 -82571612 - MER90 LTR ERV1 -18 596 460 634 182 9 0 chr10 57746409 57746519 -82570246 + FLAM_C SINE Alu 1 111 -32 26 64 0 0 chr10 57746702 57746749 -82570016 + AT_rich Low_complexity Low_complexity 1 47 0 26 50 0 0 chr10 57748341 57748381 -82568384 + AT_rich Low_complexity Low_complexity 1 40 0 3908 248 28 30 chr10 57748603 57749643 -82567122 + MER45B DNA AcHobo 3 1040 0 292 385 12 12 chr10 57752510 57752679 -82564086 - MER5A DNA MER1_type 0 189 21 6395 144 35 32 chr10 57753056 57754270 -82562495 - Tigger3b DNA MER2_type -14 1217 1 937 178 137 0 chr10 57755603 57755800 -82560965 + MER58A DNA MER1_type 1 224 0 1530 192 7 24 chr10 57756755 57757042 -82559723 + AluJo SINE Alu 1 282 -30 273 98 0 0 chr10 57757048 57757089 -82559676 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr10 57757110 57757145 -82559620 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr10 57757974 57758003 -82558762 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 57758153 57758181 -82558584 + AT_rich Low_complexity Low_complexity 1 28 0 1375 83 16 5 chr10 57758197 57758390 -82558375 - AluSc SINE Alu -17 292 98 34974 83 5 3 chr10 57758512 57763090 -82553675 - HERVL-A1 LTR ERVL -1067 4587 1 3039 70 8 93 chr10 57763090 57763574 -82553191 - MLT2A1 LTR ERVL 0 444 2 2111 138 158 60 chr10 57763574 57764075 -82552690 - LTR8A LTR ERV1 -177 550 1 22 0 0 0 chr10 57764284 57764306 -82552459 + AT_rich Low_complexity Low_complexity 1 22 0 756 260 101 38 chr10 57764691 57765116 -82551649 - MLT1E1 LTR MaLR -228 396 1 206 158 26 0 chr10 57765984 57766022 -82550743 + (TG)n Simple_repeat Simple_repeat 2 40 0 207 0 0 0 chr10 57766368 57766391 -82550374 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 466 133 78 141 chr10 57766489 57766617 -82550148 - AluJb SINE Alu -15 297 178 204 97 0 0 chr10 57767292 57767323 -82549442 + (TG)n Simple_repeat Simple_repeat 2 32 0 2402 84 0 3 chr10 57767691 57767999 -82548766 + AluSp SINE Alu 3 309 -4 194 232 0 87 chr10 57769369 57769438 -82547327 - MIR SINE MIR 0 262 200 612 302 45 33 chr10 57769938 57770180 -82546585 - MIR SINE MIR -12 250 6 774 186 0 45 chr10 57770402 57770558 -82546207 + AluJ SINE Alu 11 159 -153 1040 120 0 16 chr10 57770629 57770812 -82545953 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 203 371 34 34 chr10 57770870 57770959 -82545806 - L2 LINE L2 -188 3084 2996 223 302 94 28 chr10 57771890 57771996 -82544769 - L2 LINE L2 -213 3059 2947 1538 211 98 33 chr10 57772945 57773372 -82543393 - MSTB2 LTR MaLR -1 456 2 458 227 29 50 chr10 57774357 57774505 -82542260 - MLT1D LTR MaLR -398 107 6 783 211 0 49 chr10 57776488 57776673 -82540092 + AluJ SINE Alu 136 311 -1 1120 251 77 22 chr10 57777147 57777778 -82538987 - L1MC4 LINE L1 -622 7420 6337 2429 77 0 13 chr10 57777957 57778270 -82538495 + AluY SINE Alu 1 309 -2 3629 108 4 4 chr10 57779353 57779864 -82536901 - MER9 LTR ERVK 0 511 1 22 0 0 0 chr10 57779989 57780011 -82536754 + AT_rich Low_complexity Low_complexity 1 22 0 400 271 141 30 chr10 57780939 57781138 -82535627 + MIR SINE MIR 15 235 -27 181 288 55 41 chr10 57781889 57781962 -82534803 + L2 LINE L2 3238 3311 -2 24 0 0 0 chr10 57782702 57782726 -82534039 + AT_rich Low_complexity Low_complexity 1 24 0 1719 180 9 29 chr10 57782956 57783300 -82533465 + MER1B DNA MER1_type 1 337 0 738 253 124 13 chr10 57783734 57783967 -82532798 - MIR SINE MIR -2 260 2 1384 256 60 32 chr10 57784861 57785263 -82531502 - MLT1E2 LTR MaLR -2 624 212 317 289 46 33 chr10 57785311 57785463 -82531302 + L1ME1 LINE L1 2571 2724 -3422 244 278 189 9 chr10 57785478 57785603 -82531162 + L1ME1 LINE L1 2961 3062 -3084 27 49 0 0 chr10 57785603 57785644 -82531121 + AT_rich Low_complexity Low_complexity 1 41 0 244 278 189 9 chr10 57785644 57785690 -82531075 + L1ME1 LINE L1 3062 3210 -2936 1569 289 44 22 chr10 57785825 57786738 -82530027 + L1ME1 LINE L1 3434 4366 -1780 23 78 0 0 chr10 57787555 57787606 -82529159 + AT_rich Low_complexity Low_complexity 1 51 0 395 190 0 0 chr10 57787956 57788035 -82528730 - MLT1E1 LTR MaLR -1 653 575 5907 157 42 19 chr10 57788051 57789607 -82527158 - L1MA2 LINE L1 0 6304 4711 1674 141 4 0 chr10 57789632 57789874 -82526891 - THE1B LTR MaLR -121 243 1 1923 234 42 25 chr10 57789874 57790345 -82526420 - L1M1 LINE L1 -7075 490 12 1579 245 132 28 chr10 57790358 57790865 -82525900 - MLT1E1 LTR MaLR -85 569 10 738 125 31 0 chr10 57791188 57791316 -82525449 + L1M2 LINE L1 5667 5798 -502 1549 184 10 34 chr10 57791334 57791530 -82525235 - AluJb SINE Alu -7 305 117 2258 160 54 5 chr10 57791530 57791936 -82524829 + MSTA LTR MaLR 1 426 -2 1549 184 10 34 chr10 57791936 57792033 -82524732 - AluJb SINE Alu -195 117 19 328 282 12 0 chr10 57792275 57792360 -82524405 + MLT1L LTR MaLR 195 280 -335 362 313 97 21 chr10 57794149 57794293 -82522472 + MIR SINE MIR 74 228 -34 184 196 0 43 chr10 57794318 57794364 -82522401 - MIR SINE MIR -55 207 164 464 214 191 35 chr10 57794552 57794725 -82522040 + MER4C LTR ERV1 1 200 -265 2832 6 0 0 chr10 57794725 57795043 -82521722 + L1HS LINE L1 5837 6154 -1 640 247 102 90 chr10 57795043 57795367 -82521398 + MER4C LTR ERV1 276 465 0 3215 145 5 100 chr10 57795885 57796556 -82520209 + MER4D LTR ERV1 128 734 -169 491 225 125 0 chr10 57796852 57797012 -82519753 + L1ME1 LINE L1 4724 4903 -1243 1412 266 59 43 chr10 57797193 57797837 -82518928 + L1ME1 LINE L1 5508 6161 -5 945 93 0 14 chr10 57798432 57798571 -82518194 + AluY SINE Alu 173 309 -2 276 322 66 11 chr10 57799480 57799663 -82517102 + MIR SINE MIR 70 262 0 326 247 65 0 chr10 57799854 57799947 -82516818 - MLT1I LTR MaLR 0 409 311 344 224 204 31 chr10 57800039 57800205 -82516560 - MER63 DNA MER1_type -10 1678 11 702 292 198 6 chr10 57800293 57800684 -82516081 - L2 LINE L2 -188 3125 2669 297 303 84 45 chr10 57802002 57802180 -82514585 - MIR SINE MIR -75 187 3 405 156 0 0 chr10 57802240 57802304 -82514461 - L1M2 LINE L1 -550 5741 5678 6420 190 138 60 chr10 57802321 57803946 -82512819 - MER52A LTR ERV1 0 1755 4 402 186 0 93 chr10 57803947 57804044 -82512721 - L1M2 LINE L1 -652 5648 5561 597 229 10 45 chr10 57804048 57804249 -82512516 + L1MA9 LINE L1 6074 6267 -45 1056 243 12 18 chr10 57804893 57805227 -82511538 - THE1C-int LTR MaLR -1248 332 1 2041 144 24 39 chr10 57805227 57805608 -82511157 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr10 57805613 57805643 -82511122 + AT_rich Low_complexity Low_complexity 1 30 0 1767 245 45 57 chr10 57805786 57806406 -82510359 + MER90 LTR ERV1 1 613 -1 221 284 202 67 chr10 57806994 57807129 -82509636 + MIR SINE MIR 1 116 -146 2215 67 0 14 chr10 57807129 57807447 -82509318 + AluY SINE Alu 4 317 0 221 284 202 67 chr10 57807447 57807518 -82509247 + MIR SINE MIR 116 236 -26 770 273 65 14 chr10 57807523 57807798 -82508967 + MER46C DNA MER2_type 20 308 -30 21 0 0 0 chr10 57808447 57808468 -82508297 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 57808737 57808764 -82508001 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 57809146 57809168 -82507597 + AT_rich Low_complexity Low_complexity 1 22 0 35 0 0 0 chr10 57809219 57809254 -82507511 + AT_rich Low_complexity Low_complexity 1 35 0 996 288 93 55 chr10 57809324 57809848 -82506917 - MER21B LTR ERV1 -162 701 158 672 259 45 9 chr10 57810501 57810725 -82506040 - L1MB3 LINE L1 -26 6157 5926 2680 144 12 14 chr10 57810726 57811155 -82505610 + MSTA LTR MaLR 1 428 0 2502 141 5 21 chr10 57811155 57811582 -82505183 + MSTA-int LTR MaLR 1 420 -1231 2076 164 45 3 chr10 57813554 57813933 -82502832 - L1MA9 LINE L1 -303 6009 5615 2006 133 14 0 chr10 57814008 57814302 -82502463 - AluSq SINE Alu -15 298 1 32 17 0 52 chr10 57814536 57814594 -82502171 + AT_rich Low_complexity Low_complexity 1 55 0 254 156 16 0 chr10 57815371 57815435 -82501330 + L1M4 LINE L1 2916 2980 -3166 607 285 27 43 chr10 57815500 57815761 -82501004 + MLT1G LTR MaLR 42 296 -294 1935 148 16 0 chr10 57815775 57816078 -82500687 + AluSx SINE Alu 1 308 -4 347 259 57 67 chr10 57816162 57816355 -82500410 + MLT1G LTR MaLR 371 561 -6 255 312 0 0 chr10 57816547 57816640 -82500125 + (TAGA)n Simple_repeat Simple_repeat 4 96 0 578 301 34 8 chr10 57816849 57817088 -82499677 - L1ME2 LINE L1 -5 6159 5915 782 282 103 25 chr10 57817135 57817610 -82499155 - L1ME2 LINE L1 -329 5835 5324 2198 104 7 0 chr10 57818051 57818339 -82498426 - AluY SINE Alu -21 290 1 21 0 0 0 chr10 57818975 57818996 -82497769 + AT_rich Low_complexity Low_complexity 1 21 0 1014 171 45 12 chr10 57819094 57819437 -82497328 + L1M2 LINE L1 5156 5512 -755 16596 98 1 3 chr10 57819437 57822657 -82494108 + L1PA7 LINE L1 2926 6148 -6 1014 171 45 12 chr10 57822657 57822671 -82494094 + L1M2 LINE L1 5512 5524 -743 282 339 24 31 chr10 57823606 57823733 -82493032 - MIR3 SINE MIR -37 171 46 2314 256 18 9 chr10 57823769 57824448 -82492317 + L1 LINE L1 3191 3875 -2271 783 268 64 25 chr10 57824456 57824770 -82491995 + L1P LINE L1 4899 5224 -922 247 167 0 19 chr10 57824972 57825026 -82491739 - Alu SINE Alu -250 53 1 233 318 170 50 chr10 57825143 57825426 -82491339 - L2 LINE L2 -116 3156 2840 962 209 58 35 chr10 57825511 57825770 -82490995 - AluJb SINE Alu -11 301 37 1852 161 7 3 chr10 57826302 57826607 -82490158 + AluSx SINE Alu 1 306 -6 1110 150 12 0 chr10 57827571 57827731 -82489034 - AluJb SINE Alu -16 296 135 2014 148 0 6 chr10 57827731 57828042 -82488723 - AluSx SINE Alu -1 311 3 187 284 47 88 chr10 57828114 57828262 -82488503 + L2 LINE L2 2344 2485 -829 361 341 39 16 chr10 57828399 57828581 -82488184 + MIR SINE MIR 48 233 -29 400 214 0 0 chr10 57828820 57828918 -82487847 - FLAM_C SINE Alu -6 137 40 2437 155 9 24 chr10 57830155 57830580 -82486185 + MSTA LTR MaLR 1 419 -9 299 77 0 0 chr10 57832472 57832511 -82484254 + MADE1 DNA Mariner 1 39 -41 301 87 0 0 chr10 57833656 57833702 -82483063 - MADE1 DNA Mariner 0 80 35 3032 129 2 4 chr10 57833822 57834286 -82482479 + L1PB2 LINE L1 5687 6149 -2 231 266 64 11 chr10 57834315 57834409 -82482356 + HAL1 LINE L1 1224 1322 -1185 492 335 3 47 chr10 57834552 57834848 -82481917 + L1MC4a LINE L1 7247 7529 -279 280 221 82 44 chr10 57834984 57835142 -82481623 + L1MC5 LINE L1 7610 7773 -188 1695 235 56 13 chr10 57835555 57836002 -82480763 - MLT1C LTR MaLR 0 467 2 586 244 53 57 chr10 57836392 57836675 -82480090 + AluSx SINE Alu 16 297 -15 502 247 157 31 chr10 57836686 57836909 -82479856 + L1M4 LINE L1 4495 4745 -1401 24 53 0 0 chr10 57836909 57836947 -82479818 + AT_rich Low_complexity Low_complexity 1 38 0 280 279 60 35 chr10 57837576 57837995 -82478770 + L1MEc LINE L1 1263 1598 -4617 1349 122 0 27 chr10 57838296 57838518 -82478247 - L1PA12 LINE L1 -7 6161 5946 8429 237 71 35 chr10 57838663 57842857 -82473908 - L1MCa LINE L1 -2075 4351 10 24 0 0 0 chr10 57843829 57843853 -82472912 + AT_rich Low_complexity Low_complexity 1 24 0 21266 82 16 4 chr10 57844095 57846977 -82469788 - HERVL LTR ERVL -16 5638 2724 336 217 0 0 chr10 57847097 57847157 -82469608 - Tigger3(Golem) DNA MER2_type -2955 74 15 232 182 36 18 chr10 57847250 57847305 -82469460 - L1ME3A LINE L1 -26 6144 6089 * 13347 168 18 7 chr10 57847301 57849816 -82466949 + L1P LINE L1 2667 5209 -937 343 338 48 26 chr10 57849819 57850088 -82466677 - HAL1 LINE L1 -487 2020 1746 21 36 0 0 chr10 57850966 57850994 -82465771 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 57851160 57851188 -82465577 + AT_rich Low_complexity Low_complexity 1 28 0 217 210 0 32 chr10 57851279 57851341 -82465424 + (TAA)n Simple_repeat Simple_repeat 1 60 0 274 324 43 18 chr10 57851861 57852049 -82464716 - LTR16A LTR ERVL -8 442 198 1918 138 0 16 chr10 57852813 57853117 -82463648 - AluSx SINE Alu -13 299 1 1922 172 8 40 chr10 57853696 57854097 -82462668 + L1MA4 LINE L1 5633 6020 -280 252 175 62 62 chr10 57854104 57854201 -82462564 + L1MB3 LINE L1 6087 6183 0 1052 188 8 4 chr10 57854246 57854480 -82462285 + L1MA3 LINE L1 6071 6305 0 502 265 82 29 chr10 57854528 57854698 -82462067 + LTR49-int LTR ERV1 420 598 -5733 794 122 14 54 chr10 57854739 57854886 -82461879 + LTR49-int LTR ERV1 1484 1624 -3256 1077 204 32 14 chr10 57854918 57855139 -82461626 + LTR49-int LTR ERV1 1619 1843 -3037 1427 155 31 78 chr10 57855259 57855581 -82461184 - LTR56 LTR ERV1 -138 307 1 1688 284 90 46 chr10 57855582 57856604 -82460161 + L2 LINE L2 2205 3270 -43 2488 45 3 3 chr10 57856604 57856915 -82459850 + AluY SINE Alu 1 311 0 1688 284 90 46 chr10 57856915 57856961 -82459804 + L2 LINE L2 3270 3313 0 23 33 0 0 chr10 57858172 57858202 -82458563 + AT_rich Low_complexity Low_complexity 1 30 0 632 204 0 31 chr10 57858257 57858419 -82458346 - L1MA10 LINE L1 -7 6327 6171 356 289 53 20 chr10 57858848 57859000 -82457765 - HAL1 LINE L1 -125 2382 2226 1681 275 58 21 chr10 57859498 57860153 -82456612 - L1M4 LINE L1 -1443 4703 4025 264 151 57 0 chr10 57860318 57860371 -82456394 - LTR37B LTR ERV1 -235 233 178 769 231 44 91 chr10 57860404 57860702 -82456063 - MER67D LTR ERV1 -230 284 1 285 230 90 20 chr10 57860703 57860803 -82455962 - LTR37B LTR ERV1 -356 112 6 351 287 33 83 chr10 57860854 57861035 -82455730 - L2 LINE L2 -732 2582 2411 266 319 73 31 chr10 57861300 57861491 -82455274 - MIR SINE MIR -33 229 31 21 36 0 0 chr10 57862077 57862105 -82454660 + AT_rich Low_complexity Low_complexity 1 28 0 316 205 33 90 chr10 57862162 57862284 -82454481 - MER5C DNA MER1_type -2 322 208 274 287 102 0 chr10 57862310 57862418 -82454347 - MER5C DNA MER1_type -205 119 1 2054 164 5 8 chr10 57862673 57863040 -82453725 - MER47A DNA MER2_type 0 366 1 258 136 0 0 chr10 57863206 57863250 -82453515 + (TC)n Simple_repeat Simple_repeat 1 44 0 352 190 0 149 chr10 57863250 57863371 -82453394 + MER8 DNA MER2_type 1 103 -136 502 221 32 0 chr10 57863471 57863566 -82453199 + MER82 DNA MER2_type 46 143 -510 2047 242 9 2 chr10 57864054 57864496 -82452269 + MER82 DNA MER2_type 200 644 -9 5715 194 26 13 chr10 57864596 57866404 -82450361 + L1MA10 LINE L1 4501 6333 -1 4085 157 51 8 chr10 57866582 57867609 -82449156 - L1M1 LINE L1 -726 5579 4505 753 214 16 6 chr10 57867598 57867780 -82448985 + L1M4 LINE L1 2782 2965 -3181 * 3026 193 18 21 chr10 57867858 57868517 -82448248 + L1M4 LINE L1 3510 4166 -1980 874 287 73 50 chr10 57868563 57869027 -82447738 - ERVL LTR ERVL -3440 2324 1850 4649 86 6 0 chr10 57869033 57869664 -82447101 - L1PA7 LINE L1 0 6154 5520 974 263 10 2 chr10 57869783 57870074 -82446691 - MER76 LTR ERV -345 343 1 403 180 47 18 chr10 57870106 57870207 -82446558 + L1M4 LINE L1 5405 5489 -685 244 325 100 8 chr10 57870732 57870852 -82445913 + L2 LINE L2 3168 3298 -15 288 111 0 0 chr10 57872438 57872483 -82444282 + (CA)n Simple_repeat Simple_repeat 2 46 0 570 27 0 27 chr10 57872883 57872958 -82443807 - L1P1 LINE L1 -453 5702 5630 2021 37 0 0 chr10 57873995 57874239 -82442526 - L1PA5 LINE L1 0 6154 5911 328 277 12 0 chr10 57874637 57874720 -82442045 + MER82 DNA MER2_type 2 85 -568 360 303 41 16 chr10 57874837 57874959 -82441806 - MIR SINE MIR -99 163 39 920 260 10 0 chr10 57875016 57875220 -82441545 + MER82 DNA MER2_type 448 653 0 307 233 33 11 chr10 57875229 57875319 -82441446 + L1ME LINE L1 236 327 -5878 454 307 82 43 chr10 57875576 57875879 -82440886 + L1ME LINE L1 1656 1970 -4426 811 265 84 58 chr10 57875884 57876654 -82440111 + L1ME LINE L1 2159 2952 -3263 25 75 0 0 chr10 57877427 57877480 -82439285 + AT_rich Low_complexity Low_complexity 1 53 0 303 302 69 16 chr10 57877480 57877669 -82439096 - L1ME4a LINE L1 -213 5908 5710 351 316 131 48 chr10 57877720 57878132 -82438633 - L1ME4a LINE L1 -1340 4806 4361 660 256 75 16 chr10 57878315 57878569 -82438196 - L1ME1 LINE L1 -9 6157 5889 1146 272 87 23 chr10 57878589 57879016 -82437749 - LTR40b LTR ERVL -8 454 1 929 229 75 19 chr10 57879016 57879326 -82437439 - L1ME1 LINE L1 -282 5884 5557 789 294 76 35 chr10 57879530 57880070 -82436695 - HAL1 LINE L1 -406 2101 1540 27 0 0 0 chr10 57880593 57880620 -82436145 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr10 57880741 57880764 -82436001 + AT_rich Low_complexity Low_complexity 1 23 0 32 26 0 0 chr10 57880924 57880963 -82435802 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 57881320 57881341 -82435424 + AT_rich Low_complexity Low_complexity 1 21 0 440 339 77 4 chr10 57881669 57881902 -82434863 + MIR SINE MIR 8 257 -5 2110 86 3 77 chr10 57882405 57882742 -82434023 + AluSx SINE Alu 1 312 0 384 238 34 41 chr10 57883824 57883971 -82432794 - L1MA7 LINE L1 -3 6288 6143 238 291 38 38 chr10 57884187 57884266 -82432499 + MIR SINE MIR 11 89 -173 934 268 111 15 chr10 57884491 57884886 -82431879 - MER57B LTR ERV1 -1 433 1 1443 183 16 85 chr10 57885207 57885383 -82431382 + LTR35-int LTR ERV1 1805 1992 -3954 180 0 0 0 chr10 57885383 57885403 -82431362 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1443 183 16 85 chr10 57885403 57885881 -82430884 + LTR35-int LTR ERV1 1992 2391 -3555 1306 138 18 22 chr10 57885890 57886115 -82430650 - THE1C LTR MaLR -151 224 1 1026 193 33 14 chr10 57886115 57886328 -82430437 + LTR35-int LTR ERV1 2504 2720 -2160 475 229 29 7 chr10 57886353 57886493 -82430272 + LTR35-int LTR ERV1 2851 2993 -1887 2782 95 0 0 chr10 57886509 57886899 -82429866 - L1PA7 LINE L1 -883 5263 4874 6785 60 9 0 chr10 57886900 57887772 -82428993 + L1PA7 LINE L1 5259 6138 -16 186 43 0 0 chr10 57887773 57887796 -82428969 + (CATA)n Simple_repeat Simple_repeat 2 24 0 246 32 0 0 chr10 57887807 57887838 -82428927 + (TC)n Simple_repeat Simple_repeat 2 32 0 302 272 12 0 chr10 57887840 57887921 -82428844 - L1MC4 LINE L1 -1347 6695 6614 211 106 21 43 chr10 57887930 57887977 -82428788 + (TA)n Simple_repeat Simple_repeat 1 46 0 2232 208 106 91 chr10 57888674 57889466 -82427299 + LTR35-int LTR ERV1 3644 4627 -1636 1135 145 0 21 chr10 57889466 57889652 -82427113 + L1PA10 LINE L1 5973 6154 -14 2232 208 106 91 chr10 57889652 57890135 -82426630 + LTR35-int LTR ERV1 4627 5101 -1162 3664 164 67 55 chr10 57890291 57891189 -82425576 + LTR35-int LTR ERV1 5260 6168 -430 358 167 76 97 chr10 57891264 57891408 -82425357 + LTR35-int LTR ERV1 5914 6054 -277 2314 164 85 4 chr10 57891775 57892163 -82424602 + LTR35 LTR ERV1 1 514 -104 315 0 0 0 chr10 57892163 57892198 -82424567 + (TC)n Simple_repeat Simple_repeat 1 35 0 2314 164 85 4 chr10 57892198 57892313 -82424452 + LTR35 LTR ERV1 514 618 0 811 296 140 63 chr10 57892327 57892854 -82423911 - MER21B LTR ERV1 -251 612 45 848 204 22 49 chr10 57893688 57893913 -82422852 - MER20 DNA MER1_type 0 219 1 1978 201 31 0 chr10 57894278 57894692 -82422073 + MER95 LTR ERV 5 431 0 333 356 43 18 chr10 57894998 57895161 -82421604 + MIR3 SINE MIR 40 206 -2 1047 147 78 6 chr10 57895683 57895905 -82420860 - L1MB1 LINE L1 -27 6141 5907 23 54 0 0 chr10 57897129 57897166 -82419599 + AT_rich Low_complexity Low_complexity 1 37 0 301 324 37 29 chr10 57898329 57898465 -82418300 - MIR3 SINE MIR -57 151 15 1644 187 75 19 chr10 57898763 57899138 -82417627 + MSTD LTR MaLR 1 396 0 329 339 46 0 chr10 57900362 57900471 -82416294 + L2 LINE L2 3173 3286 -27 237 33 0 0 chr10 57900477 57900507 -82416258 + (TC)n Simple_repeat Simple_repeat 1 30 0 234 0 0 0 chr10 57900506 57900532 -82416233 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 595 170 0 0 chr10 57901170 57901270 -82415495 + L1PB3 LINE L1 6023 6122 -32 1499 181 7 0 chr10 57901278 57901560 -82415205 - L1 LINE L1 -1214 4932 4649 11760 85 5 5 chr10 57901750 57903598 -82413167 - L1P3 LINE L1 -610 5544 3694 306 0 0 0 chr10 57903598 57903632 -82413133 + (TTG)n Simple_repeat Simple_repeat 3 36 0 9317 104 7 2 chr10 57903641 57905028 -82411737 + L1P3 LINE L1 2279 3671 -2475 594 41 0 0 chr10 57905168 57905241 -82411524 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 322 351 22 0 chr10 57905308 57905442 -82411323 - HERVL LTR ERVL -4062 1592 1456 747 362 21 15 chr10 57905559 57905709 -82411056 - LTR16C LTR ERVL -155 336 188 1799 221 26 12 chr10 57905709 57906139 -82410626 + MER63B DNA MER1_type 1 436 0 747 362 21 15 chr10 57906139 57906322 -82410443 - LTR16C LTR ERVL -303 188 1 350 138 69 0 chr10 57907301 57907359 -82409406 - MER58 DNA MER1_type -11 2409 2348 282 275 0 0 chr10 57907364 57907433 -82409332 - MER58 DNA MER1_type -2178 242 174 701 292 96 3 chr10 57907661 57907962 -82408803 - L2 LINE L2 -9 3304 2976 386 382 33 29 chr10 57908124 57908396 -82408369 - L2 LINE L2 -341 2973 2701 1205 116 0 32 chr10 57908405 57908594 -82408171 - AluSg/x SINE Alu -5 307 125 1579 140 24 107 chr10 57908609 57908945 -82407820 - AluYb8 SINE Alu -10 308 1 526 285 68 34 chr10 57908945 57909152 -82407613 - L2 LINE L2 -596 2718 2505 261 358 109 15 chr10 57909736 57909873 -82406892 - MIR3 SINE MIR -1 207 58 234 0 0 0 chr10 57910462 57910488 -82406277 + (T)n Simple_repeat Simple_repeat 1 26 0 912 221 86 22 chr10 57910748 57910970 -82405795 - MLT1A1 LTR MaLR 0 365 130 216 0 0 0 chr10 57911199 57911223 -82405542 + (TTA)n Simple_repeat Simple_repeat 2 25 0 254 293 38 47 chr10 57911223 57911329 -82405436 - MLT1J LTR MaLR -171 340 236 263 322 92 63 chr10 57911641 57911880 -82404885 - HAL1 LINE L1 -1728 779 534 368 289 49 89 chr10 57912027 57912273 -82404492 - HAL1 LINE L1 -2207 300 65 2014 133 0 37 chr10 57912349 57912672 -82404093 - AluSq SINE Alu -2 311 1 6759 67 7 0 chr10 57912859 57914239 -82402526 + L1PA7 LINE L1 4760 6141 -13 237 349 64 9 chr10 57914473 57914582 -82402183 - L2 LINE L2 -37 3235 3121 259 318 110 29 chr10 57914980 57915153 -82401612 + MIR SINE MIR 64 250 -12 1242 217 188 30 chr10 57916148 57916553 -82400212 + MLT2B2 LTR ERVL 1 469 -46 2117 58 0 11 chr10 57916724 57916985 -82399780 - AluY SINE Alu -7 304 47 21 36 0 0 chr10 57917172 57917200 -82399565 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr10 57917423 57917465 -82399300 + AT_rich Low_complexity Low_complexity 1 42 0 237 368 0 105 chr10 57917791 57917924 -82398841 + MIR3 SINE MIR 56 169 -39 2804 7 0 0 chr10 57917924 57918232 -82398533 + AluYa5 SINE Alu 1 308 -3 237 368 0 105 chr10 57918232 57918269 -82398496 + MIR3 SINE MIR 169 208 0 498 281 21 141 chr10 57918431 57918544 -82398221 - MLT1H1 LTR MaLR -310 245 212 1356 190 52 30 chr10 57918544 57918849 -82397916 - AluJo SINE Alu 0 312 1 498 281 21 141 chr10 57918849 57919036 -82397729 - MLT1H1 LTR MaLR -343 212 4 261 310 209 0 chr10 57919134 57919292 -82397473 + MIR SINE MIR 72 262 0 34 42 0 0 chr10 57920546 57920594 -82396171 + AT_rich Low_complexity Low_complexity 1 48 0 380 216 34 11 chr10 57920997 57921085 -82395680 - MIR SINE MIR -83 179 90 1407 213 96 105 chr10 57921111 57921655 -82395110 - MLT1E2 LTR MaLR 0 626 88 237 139 0 0 chr10 57921656 57921699 -82395066 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 242 316 25 0 chr10 57921699 57921778 -82394987 - MLT1E2 LTR MaLR -545 81 1 213 179 21 11 chr10 57922677 57922772 -82393993 + (TTATA)n Simple_repeat Simple_repeat 1 96 0 29 0 0 0 chr10 57922772 57922801 -82393964 + AT_rich Low_complexity Low_complexity 1 29 0 331 175 32 78 chr10 57922801 57923598 -82393167 + (TA)n Simple_repeat Simple_repeat 1 760 0 246 208 35 35 chr10 57923639 57923812 -82392953 + (TTATA)n Simple_repeat Simple_repeat 4 176 0 201 195 63 29 chr10 57923831 57924005 -82392760 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 361 235 16 33 chr10 57924972 57925155 -82391610 + (TA)n Simple_repeat Simple_repeat 1 180 0 27 0 0 0 chr10 57925155 57925182 -82391583 + AT_rich Low_complexity Low_complexity 1 27 0 2142 114 7 0 chr10 57925994 57926292 -82390473 + AluSx SINE Alu 1 300 -12 192 220 68 34 chr10 57926594 57926653 -82390112 - MER5A DNA MER1_type -1 188 128 318 272 158 19 chr10 57926730 57926888 -82389877 + MIR SINE MIR 12 191 -71 515 195 25 0 chr10 57927329 57927447 -82389318 - L1 LINE L1 -3096 3050 2930 1304 86 5 16 chr10 57927447 57927634 -82389131 + THE1A LTR MaLR 171 355 0 939 278 27 18 chr10 57928234 57928572 -82388193 + L2 LINE L2 465 805 -2509 371 239 11 11 chr10 57928584 57928676 -82388089 - MLT1I LTR MaLR -12 397 306 2013 137 0 7 chr10 57928747 57929046 -82387719 + AluSq SINE Alu 1 297 -16 421 271 60 27 chr10 57929203 57929398 -82387367 - MLT1I LTR MaLR -244 206 1 1259 306 140 73 chr10 57929400 57930679 -82386086 + L2 LINE L2 804 2167 -1147 810 294 44 21 chr10 57931325 57931824 -82384941 - MER90 LTR ERV1 -23 591 5 4388 252 100 33 chr10 57931846 57932804 -82383961 + L1MC4 LINE L1 5787 6679 -1363 186 43 0 0 chr10 57932804 57932827 -82383938 + (TAA)n Simple_repeat Simple_repeat 2 24 0 4388 252 100 33 chr10 57932827 57933760 -82383005 + L1MC4 LINE L1 6679 7805 -237 409 268 106 106 chr10 57933938 57934003 -82382762 - MIR SINE MIR 0 262 198 2005 142 0 0 chr10 57934003 57934299 -82382466 - AluSx SINE Alu -16 296 1 409 268 106 106 chr10 57934299 57934479 -82382286 - MIR SINE MIR -63 199 17 5073 145 35 10 chr10 57936266 57937147 -82379618 + MER4D LTR ERV1 1 903 0 44 0 0 0 chr10 57937236 57937280 -82379485 + AT_rich Low_complexity Low_complexity 1 44 0 490 138 75 0 chr10 57937374 57937468 -82379297 + L1MB3 LINE L1 6080 6180 -3 571 306 59 9 chr10 57937890 57938109 -82378656 + MIR SINE MIR 29 258 -4 306 316 35 0 chr10 57938099 57938213 -82378552 + MIR SINE MIR 144 261 -1 * 202 182 18 73 chr10 57938529 57938584 -82378181 - L2 LINE L2 0 3272 3221 * 264 263 10 136 chr10 57938581 57938732 -82378033 + MIR SINE MIR 33 155 -107 1962 175 51 3 chr10 57938732 57939103 -82377662 + MLT1B LTR MaLR 2 390 0 264 263 10 136 chr10 57939103 57939149 -82377616 + MIR SINE MIR 155 205 -57 378 0 0 0 chr10 57939954 57939996 -82376769 + (CA)n Simple_repeat Simple_repeat 1 42 0 1540 213 0 0 chr10 57940363 57940636 -82376129 - AluJo SINE Alu -39 273 1 2853 9 0 0 chr10 57942259 57942574 -82374191 - AluYb8 SINE Alu -3 315 1 270 0 0 0 chr10 57943986 57944016 -82372749 + (TA)n Simple_repeat Simple_repeat 2 31 0 662 238 129 0 chr10 57945187 57945389 -82371376 + L1ME3A LINE L1 5915 6142 -28 22 35 0 0 chr10 57945586 57945615 -82371150 + AT_rich Low_complexity Low_complexity 1 29 0 189 306 31 71 chr10 57945692 57945790 -82370975 + MIR SINE MIR 113 206 -56 228 232 18 0 chr10 57946675 57946731 -82370034 + CT-rich Low_complexity Low_complexity 2 58 0 182 154 231 0 chr10 57947495 57947534 -82369231 + L2 LINE L2 3266 3313 0 1003 201 70 0 chr10 57948537 57948781 -82367984 - LTR37B LTR ERV1 0 468 208 263 238 12 38 chr10 57948835 57948915 -82367850 - LTR37B LTR ERV1 -375 93 16 423 307 59 25 chr10 57948929 57949131 -82367634 - L1ME4a LINE L1 -72 6049 5841 184 282 0 56 chr10 57949154 57949225 -82367540 - MIR SINE MIR -86 176 110 5260 170 36 11 chr10 57949674 57950940 -82365825 - L1MA5 LINE L1 -5 6295 4999 24 53 0 0 chr10 57950995 57951033 -82365732 + AT_rich Low_complexity Low_complexity 1 38 0 665 78 26 9 chr10 57952711 57952826 -82363939 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 543 228 86 12 chr10 57952834 57952996 -82363769 + MLT1E3 LTR MaLR 4 177 -447 241 254 90 45 chr10 57953118 57953252 -82363513 + MLT1E2 LTR MaLR 215 354 -272 979 198 6 0 chr10 57953365 57953542 -82363223 - Tigger1 DNA MER2_type -2240 178 1 553 286 117 15 chr10 57954227 57954433 -82362332 - MIR SINE MIR 0 262 36 301 265 44 0 chr10 57954475 57954543 -82362222 - Tigger3(Golem) DNA MER2_type -1 3028 2958 1113 271 39 13 chr10 57954758 57955068 -82361697 + MLT1E2 LTR MaLR 307 624 -2 1602 278 61 77 chr10 57955108 57956077 -82360688 - L1MC4 LINE L1 -148 7894 6942 7757 128 28 37 chr10 57956388 57957730 -82359035 - Tigger1 DNA MER2_type -12 2406 1078 936 166 0 6 chr10 57957855 57958018 -82358747 - Tigger3(Golem) DNA MER2_type -97 2932 2771 725 253 0 19 chr10 57958002 57958156 -82358609 - Tigger3(Golem) DNA MER2_type -2877 152 2 * 2241 107 0 0 chr10 57958611 57958909 -82357856 - AluSc SINE Alu -11 298 1 223 289 144 21 chr10 57959709 57959806 -82356959 - MIR SINE MIR -153 109 1 268 228 33 0 chr10 57960015 57960107 -82356658 + GA-rich Low_complexity Low_complexity 2 96 0 2224 253 103 45 chr10 57960152 57962090 -82354675 + L1MC4 LINE L1 4063 6159 -7 373 340 17 8 chr10 57962379 57962602 -82354163 + GA-rich Low_complexity Low_complexity 1 224 0 222 37 0 0 chr10 57962780 57962807 -82353958 + (CA)n Simple_repeat Simple_repeat 2 28 0 39271 75 7 4 chr10 57963096 57969183 -82347582 - L1PA5 LINE L1 -5 6149 46 881 274 71 24 chr10 57971351 57971855 -82344910 - L1MC5 LINE L1 -106 7855 7328 444 283 117 14 chr10 57971928 57972073 -82344692 + MER21B LTR ERV1 12 171 -692 516 271 51 8 chr10 57972095 57972331 -82344434 - L1MC5 LINE L1 -789 7172 6927 1371 205 57 47 chr10 57972444 57972830 -82343935 + MLT1B LTR MaLR 1 390 0 190 321 0 0 chr10 57973058 57973111 -82343654 - L2 LINE L2 -4 3268 3216 23 33 0 0 chr10 57974256 57974286 -82342479 + AT_rich Low_complexity Low_complexity 1 30 0 181 366 12 0 chr10 57974735 57974817 -82341948 + MIR SINE MIR 58 140 -122 333 149 18 53 chr10 57974845 57974959 -82341806 + GA-rich Low_complexity Low_complexity 2 111 0 6745 132 12 12 chr10 57975424 57976763 -82340002 - L1MA2 LINE L1 -2 7721 6382 3486 160 13 8 chr10 57976739 57977371 -82339394 - L1MA2 LINE L1 -1823 5742 5108 * 274 229 0 0 chr10 57977383 57977431 -82339334 - AluJ/monomer SINE Alu -255 48 1 3773 228 23 8 chr10 57977432 57978362 -82338403 - L1MA2 LINE L1 -2574 4991 4048 10949 185 19 77 chr10 57978365 57980846 -82335919 - L1MA2 LINE L1 -5210 2355 17 600 330 46 43 chr10 57981062 57981324 -82335441 - L2 LINE L2 0 3313 3048 1864 162 19 30 chr10 57981324 57981689 -82335076 + THE1B LTR MaLR 4 364 0 600 330 46 43 chr10 57981689 57981796 -82334969 - L2 LINE L2 -265 3048 2943 261 0 0 0 chr10 57981893 57981922 -82334843 + (TG)n Simple_repeat Simple_repeat 2 30 0 3474 146 40 0 chr10 57982094 57982689 -82334076 - L1MA5 LINE L1 -302 5998 5380 345 101 61 0 chr10 57982692 57982791 -82333974 + (TA)n Simple_repeat Simple_repeat 1 105 0 3649 183 24 5 chr10 57982794 57983555 -82333210 - L1MA5 LINE L1 -762 5384 4610 849 159 35 0 chr10 57983555 57983722 -82333043 + L1MA5 LINE L1 6124 6299 -1 492 43 29 0 chr10 57984845 57984915 -82331850 + L1P4 LINE L1 5417 5488 -675 2831 129 9 0 chr10 57985015 57985448 -82331317 + L1PA16 LINE L1 5727 6163 -3 341 91 39 13 chr10 57985449 57985526 -82331239 + (TA)n Simple_repeat Simple_repeat 2 80 0 1255 258 58 19 chr10 57985531 57985891 -82330874 + L1M4c LINE L1 18 391 -5993 819 190 33 58 chr10 57985961 57986203 -82330562 + L1M4 LINE L1 5096 5331 -815 365 219 34 0 chr10 57986184 57986303 -82330462 + L1 LINE L1 3292 3414 -2732 * 437 229 0 0 chr10 57986323 57986406 -82330359 - MLT1D LTR MaLR -410 95 13 2478 69 3 0 chr10 57986435 57986741 -82330024 - AluY SINE Alu -4 307 1 1718 173 0 7 chr10 57987166 57987455 -82329310 - AluSx SINE Alu -23 289 3 27 0 0 0 chr10 57987636 57987663 -82329102 + AT_rich Low_complexity Low_complexity 1 27 0 371 304 182 23 chr10 57988266 57988480 -82328285 - MIR SINE MIR 0 262 15 24 53 0 0 chr10 57988562 57988600 -82328165 + AT_rich Low_complexity Low_complexity 1 38 0 455 233 54 16 chr10 57989062 57989191 -82327574 + MER94 DNA DNA 1 134 0 688 258 107 84 chr10 57989327 57989982 -82326783 + L1M4c LINE L1 308 968 -5404 451 274 100 42 chr10 57989992 57990182 -82326583 - MER58C DNA MER1_type -3 212 12 * 640 225 126 16 chr10 57990137 57990319 -82326446 + MER58C DNA MER1_type 11 212 -3 382 279 12 0 chr10 57990326 57990412 -82326353 + MER58 DNA MER1_type 1 87 -254 180 0 0 0 chr10 57990862 57990882 -82325883 + (T)n Simple_repeat Simple_repeat 1 20 0 233 236 14 28 chr10 57991087 57991159 -82325606 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 931 109 31 10 chr10 57991237 57991531 -82325234 + (TAGA)n Simple_repeat Simple_repeat 1 300 0 3309 154 73 14 chr10 57991600 57992178 -82324587 - LTR9 LTR ERV1 0 612 1 1208 132 0 61 chr10 57992178 57992390 -82324375 - HUERS-P3 LTR ERV1 -1 8918 8720 857 139 14 6 chr10 57992546 57992723 -82324042 - LTR9-int LTR ERV1 -2467 2548 2056 2307 204 13 20 chr10 57992731 57993191 -82323574 - LTR9-int LTR ERV1 -473 6945 6489 16621 153 115 126 chr10 57993193 57997738 -82319027 - LTR9-int LTR ERV1 -2899 4519 27 2012 131 83 22 chr10 57997764 57998275 -82318490 - LTR9 LTR ERV1 0 612 2 275 328 31 39 chr10 57998354 57998482 -82318283 - MER5A DNA MER1_type 0 189 63 352 278 0 33 chr10 57998576 57998666 -82318099 + MER5B DNA MER1_type 41 127 -51 22 0 0 0 chr10 57999369 57999391 -82317374 + AT_rich Low_complexity Low_complexity 1 22 0 934 249 32 52 chr10 58000270 58000384 -82316381 - L1MB7 LINE L1 0 6184 6069 4822 81 25 29 chr10 58000384 58001075 -82315690 + LTR12 LTR ERV1 1 688 0 934 249 32 52 chr10 58001075 58001305 -82315460 - L1MB7 LINE L1 -115 6069 5847 10874 208 36 26 chr10 58001507 58006622 -82310143 + L1PBa LINE L1 57 5509 -1353 2456 63 3 0 chr10 58007662 58007965 -82308800 + AluY SINE Alu 1 304 -7 2383 73 0 0 chr10 58007975 58008277 -82308488 + AluY SINE Alu 1 302 -9 29 28 0 0 chr10 58008361 58008397 -82308368 + AT_rich Low_complexity Low_complexity 1 36 0 381 274 174 36 chr10 58008860 58009141 -82307624 + HAL1 LINE L1 976 1295 -1212 245 285 29 7 chr10 58009352 58009489 -82307276 + (TA)n Simple_repeat Simple_repeat 1 140 0 24 0 0 0 chr10 58009496 58009520 -82307245 + AT_rich Low_complexity Low_complexity 1 24 0 511 296 104 43 chr10 58010001 58010424 -82306341 - HAL1b LINE L1 -182 1166 718 28 48 0 0 chr10 58010546 58010588 -82306177 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr10 58010753 58010775 -82305990 + AT_rich Low_complexity Low_complexity 1 22 0 7057 183 11 64 chr10 58011063 58012554 -82304211 + MER52A LTR ERV1 365 1755 0 6801 197 15 25 chr10 58012888 58013686 -82303079 - L1PA16 LINE L1 -6 6160 5355 2414 100 0 0 chr10 58013686 58013995 -82302770 - AluSc SINE Alu 0 309 1 6801 197 15 25 chr10 58013995 58015619 -82301146 - L1PA16 LINE L1 -811 5355 3759 22 56 0 0 chr10 58015706 58015742 -82301023 + AT_rich Low_complexity Low_complexity 1 36 0 798 265 63 70 chr10 58017864 58018385 -82298380 - MER51C LTR ERV1 -19 621 1 396 0 0 0 chr10 58018397 58018441 -82298324 + (TG)n Simple_repeat Simple_repeat 2 45 0 339 344 84 49 chr10 58018441 58018787 -82297978 - L1MC/D LINE L1 -2159 5649 5292 2209 91 10 0 chr10 58019305 58019603 -82297162 - AluSq SINE Alu -12 301 1 1038 250 24 14 chr10 58019853 58020141 -82296624 - L1ME1 LINE L1 -281 5885 5595 1138 145 0 0 chr10 58020169 58020348 -82296417 + L1MC1 LINE L1 6014 6192 -141 2740 191 78 24 chr10 58020348 58021117 -82295648 + MER21A LTR ERV1 1 925 -6 742 186 0 0 chr10 58021122 58021251 -82295514 + L1MC1 LINE L1 6187 6315 -18 2912 57 13 8 chr10 58021628 58022015 -82294750 - L1PA7 LINE L1 -1 6153 5765 274 366 76 12 chr10 58023413 58023585 -82293180 - MIR SINE MIR -19 243 61 230 301 0 0 chr10 58024671 58024744 -82292021 + L1ME1 LINE L1 5998 6070 -96 267 291 128 14 chr10 58074911 58075052 -82241713 + MIR SINE MIR 54 210 -52 591 125 52 0 chr10 58075183 58075279 -82241486 + L1MB8 LINE L1 6072 6172 -6 223 179 0 54 chr10 58075281 58075337 -82241428 + (CATA)n Simple_repeat Simple_repeat 2 54 0 2373 184 69 4 chr10 58076564 58077016 -82239749 + L1PB4 LINE L1 5669 6149 -7 341 197 51 8 chr10 58077016 58077133 -82239632 + (TA)n Simple_repeat Simple_repeat 1 122 0 1743 185 26 31 chr10 58077145 58077497 -82239268 - MLT2C1 LTR ERVL -47 350 1 890 269 31 66 chr10 58079106 58079559 -82237206 + LTR68 LTR ERV1 1 437 -303 7225 46 15 1 chr10 58080848 58081778 -82234987 + L1P LINE L1 4257 5199 -947 1634 104 32 8 chr10 58081778 58082029 -82234736 - MLT2A1 LTR ERVL -187 257 1 535 309 23 59 chr10 58082076 58082464 -82234301 - Tigger4(Zombi) DNA MER2_type -1826 905 532 623 284 6 12 chr10 58082823 58082992 -82233773 - MIR SINE MIR -94 168 1 1751 203 11 24 chr10 58084113 58084492 -82232273 - MLT1A2 LTR MaLR 0 374 1 22 70 0 0 chr10 58084725 58084768 -82231997 + AT_rich Low_complexity Low_complexity 1 43 0 270 229 4 0 chr10 58085699 58085764 -82231001 + L1MC/D LINE L1 5721 5787 -552 2516 97 24 16 chr10 58085764 58086136 -82230629 - THE1C LTR MaLR 0 375 1 2523 108 3 18 chr10 58086136 58086523 -82230242 - THE1C-int LTR MaLR 0 1580 1200 1147 92 92 31 chr10 58086523 58086718 -82230047 - THE1C-int LTR MaLR -1303 277 71 * 2690 97 8 11 chr10 58086690 58087071 -82229694 - THE1C-int LTR MaLR -1200 380 1 2297 133 22 0 chr10 58087071 58087438 -82229327 - THE1C LTR MaLR 0 375 1 318 126 11 126 chr10 58087466 58087553 -82229212 + L1MA9 LINE L1 6052 6128 -184 21 71 0 0 chr10 58089224 58089266 -82227499 + AT_rich Low_complexity Low_complexity 1 42 0 283 338 45 0 chr10 58090103 58090270 -82226495 + MIR SINE MIR 19 195 -65 2003 137 17 0 chr10 58090349 58090642 -82226123 - AluSx SINE Alu -14 298 1 243 268 98 12 chr10 58092076 58092158 -82224607 + L2 LINE L2 3225 3313 0 586 275 140 53 chr10 58092257 58092613 -82224152 + L2 LINE L2 1459 1845 -1469 22 35 0 0 chr10 58093604 58093633 -82223132 + AT_rich Low_complexity Low_complexity 1 29 0 348 325 165 5 chr10 58094871 58095083 -82221682 + MIR SINE MIR 5 250 -12 195 262 9 93 chr10 58095100 58095207 -82221558 + MIR3 SINE MIR 109 206 -2 3261 220 29 17 chr10 58096028 58097540 -82219225 + L1M2 LINE L1 2053 3583 -3265 852 143 7 0 chr10 58097542 58097689 -82219076 + L1MA5 LINE L1 6135 6282 -18 907 266 42 31 chr10 58097735 58098021 -82218744 + MLT1C LTR MaLR 171 459 -8 213 231 0 0 chr10 58098254 58098293 -82218472 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 258 229 0 62 chr10 58098297 58098393 -82218372 - L1MC4 LINE L1 -1339 6703 6614 273 221 0 0 chr10 58098397 58098465 -82218300 + (TA)n Simple_repeat Simple_repeat 2 69 0 248 294 24 0 chr10 58098469 58098554 -82218211 - L1MC4 LINE L1 -1339 6703 6617 302 263 28 28 chr10 58098589 58098768 -82217997 + (TA)n Simple_repeat Simple_repeat 1 179 0 288 339 18 18 chr10 58099604 58099713 -82217052 - MIR SINE MIR -139 123 15 191 35 0 35 chr10 58100317 58100346 -82216419 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 2234 95 0 46 chr10 58100717 58101044 -82215721 + AluSx SINE Alu 1 312 0 1409 140 23 145 chr10 58102256 58102607 -82214158 + AluYb8 SINE Alu 1 308 0 313 192 81 153 chr10 58102855 58103079 -82213686 - LTR37B LTR ERV1 -226 242 38 1885 157 168 8 chr10 58103079 58103448 -82213317 - MSTA LTR MaLR 0 428 1 313 192 81 153 chr10 58103448 58103484 -82213281 - LTR37B LTR ERV1 -430 38 1 369 235 136 25 chr10 58103675 58103837 -82212928 + MIR SINE MIR 83 262 0 900 229 23 53 chr10 58104011 58104277 -82212488 + MER92A LTR ERV1 141 398 -14 195 215 323 0 chr10 58104720 58104785 -82211980 - L2 LINE L2 -4 3268 3183 556 264 193 52 chr10 58105134 58105502 -82211263 - MLT1K LTR MaLR -128 460 41 253 424 61 28 chr10 58106193 58106554 -82210211 - L2 LINE L2 -373 2941 2569 379 369 135 22 chr10 58107013 58107590 -82209175 + L2 LINE L2 2205 2846 -468 24 0 0 0 chr10 58107722 58107746 -82209019 + AT_rich Low_complexity Low_complexity 1 24 0 232 297 0 0 chr10 58108326 58108400 -82208365 - L2 LINE L2 -81 3232 3159 2073 224 31 9 chr10 58108406 58108843 -82207922 - MER82 DNA MER2_type 0 653 204 464 89 13 0 chr10 58108843 58108922 -82207843 + (TA)n Simple_repeat Simple_repeat 1 80 0 2073 224 31 9 chr10 58108922 58108939 -82207826 - MER82 DNA MER2_type -449 204 189 266 304 0 0 chr10 58108938 58109007 -82207758 - MER82 DNA MER2_type -583 70 2 * 329 256 11 11 chr10 58109298 58109388 -82207377 + L1MC4 LINE L1 6614 6703 -1339 24 0 0 0 chr10 58109579 58109603 -82207162 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 58109682 58109706 -82207059 + AT_rich Low_complexity Low_complexity 1 24 0 209 286 18 0 chr10 58109791 58109847 -82206918 + MIR SINE MIR 36 92 -170 3181 181 42 17 chr10 58109951 58110047 -82206718 - MER67C LTR ERV1 -2 708 616 2120 102 3 88 chr10 58110047 58110389 -82206376 + AluSq SINE Alu 1 313 0 3181 181 42 17 chr10 58110389 58110983 -82205782 - MER67C LTR ERV1 -94 616 1 1997 187 38 75 chr10 58111443 58111980 -82204785 + LTR49 LTR ERV1 109 572 -23 22 0 0 0 chr10 58112171 58112193 -82204572 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr10 58112311 58112363 -82204402 + AT_rich Low_complexity Low_complexity 1 52 0 1098 230 49 59 chr10 58113286 58113694 -82203071 - LTR37A LTR ERV1 -4 422 19 1139 206 38 59 chr10 58114299 58114667 -82202098 + MLT1A1 LTR MaLR 1 396 0 2056 130 14 0 chr10 58114775 58115068 -82201697 + AluSx SINE Alu 1 297 -15 500 180 0 4 chr10 58115427 58115531 -82201234 + L1MA7 LINE L1 5832 5933 -249 1294 153 0 0 chr10 58115659 58115849 -82200916 + AluSx SINE Alu 1 190 -122 1097 101 7 0 chr10 58116033 58116182 -82200583 - AluY SINE Alu -5 306 157 26 64 0 0 chr10 58116360 58116407 -82200358 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr10 58116934 58116954 -82199811 + (TA)n Simple_repeat Simple_repeat 1 20 0 675 256 0 0 chr10 58117689 58117822 -82198943 + MLT1E1 LTR MaLR 1 133 -521 1744 199 18 23 chr10 58117822 58118214 -82198551 - MLT1B LTR MaLR 0 390 1 234 180 82 123 chr10 58118214 58118266 -82198499 + MLT1E1 LTR MaLR 176 229 -425 821 149 0 22 chr10 58118266 58118400 -82198365 + FLAM_C SINE Alu 3 133 0 234 180 82 123 chr10 58118400 58118469 -82198296 + MLT1E1 LTR MaLR 229 292 -362 584 244 87 67 chr10 58118520 58118819 -82197946 - L1MC4 LINE L1 -527 7515 7211 841 134 0 16 chr10 58118819 58118946 -82197819 - AluSp/q SINE Alu -19 294 170 1717 257 75 37 chr10 58118947 58119625 -82197140 - L1MC4 LINE L1 -822 7220 6517 417 296 74 22 chr10 58119626 58119761 -82197004 - MIR SINE MIR -118 144 3 22 0 0 0 chr10 58121092 58121114 -82195651 + AT_rich Low_complexity Low_complexity 1 22 0 6785 98 8 4 chr10 58121855 58126449 -82190316 + L1PA7 LINE L1 1492 6149 -5 700 192 0 23 chr10 58128046 58128176 -82188589 + L1PB4 LINE L1 5974 6100 -56 229 290 16 0 chr10 58129033 58129095 -82187670 + L2 LINE L2 3251 3313 0 282 297 36 51 chr10 58129467 58129605 -82187160 + MIR SINE MIR 64 199 -63 21 0 0 0 chr10 58130152 58130173 -82186592 + AT_rich Low_complexity Low_complexity 1 21 0 2283 161 46 10 chr10 58132468 58132884 -82183881 + MSTB1 LTR MaLR 2 432 0 5041 137 14 12 chr10 58133963 58134790 -82181975 - L1PA16 LINE L1 -4 6162 5334 371 351 32 7 chr10 58136522 58136676 -82180089 - MIR SINE MIR -84 178 21 7076 52 7 0 chr10 58137461 58138770 -82177995 - L1PA5 LINE L1 -3 6151 4840 291 310 74 47 chr10 58139316 58139574 -82177191 - L2 LINE L2 -432 2882 2618 340 299 51 19 chr10 58139624 58139781 -82176984 - MIR SINE MIR -10 252 91 2599 231 110 36 chr10 58139921 58140695 -82176070 + MER109 Unknown Unknown 838 1698 -734 2040 70 59 0 chr10 58140695 58140967 -82175798 - AluY SINE Alu -8 303 16 2599 231 110 36 chr10 58140967 58141152 -82175613 + MER109 Unknown Unknown 1698 1868 -564 2335 89 0 13 chr10 58141496 58141810 -82174955 - AluSx SINE Alu 0 312 3 1868 160 63 0 chr10 58142078 58142428 -82174337 - MER93b LTR ERV1 -1 372 1 23 0 0 0 chr10 58143392 58143415 -82173350 + AT_rich Low_complexity Low_complexity 1 23 0 218 333 0 0 chr10 58144137 58144206 -82172559 + L2 LINE L2 2990 3058 -214 730 163 0 0 chr10 58144274 58144403 -82172362 - L1M4 LINE L1 -410 5774 5646 263 227 0 0 chr10 58144445 58144533 -82172232 + L1MC4 LINE L1 6616 6703 -1339 869 304 43 17 chr10 58144542 58144894 -82171871 - L1MEc LINE L1 -5638 758 398 1805 143 0 0 chr10 58145201 58145460 -82171305 + AluSq SINE Alu 3 261 -52 369 0 0 0 chr10 58145468 58145509 -82171256 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 683 0 24 0 chr10 58145510 58145592 -82171173 + (TAAAA)n Simple_repeat Simple_repeat 3 86 0 720 365 102 35 chr10 58145972 58146797 -82169968 + L2 LINE L2 2015 2894 -420 1007 269 164 13 chr10 58147264 58147739 -82169026 + MLT1H LTR MaLR 3 549 0 315 216 165 0 chr10 58147740 58147837 -82168928 - MIR SINE MIR -27 235 123 21 0 0 0 chr10 58148457 58148478 -82168287 + AT_rich Low_complexity Low_complexity 1 21 0 216 333 0 54 chr10 58149401 58149437 -82167328 - MIR SINE MIR -74 188 152 5098 121 22 5 chr10 58149437 58149808 -82166957 - L1PA15 LINE L1 -6 6159 5796 2340 81 0 3 chr10 58149808 58150104 -82166661 - AluY SINE Alu -16 295 1 5098 121 22 5 chr10 58150104 58151280 -82165485 - L1PA15 LINE L1 -369 5796 4561 216 333 0 54 chr10 58151280 58151354 -82165411 - MIR SINE MIR -110 152 84 248 268 14 0 chr10 58151518 58151589 -82165176 - L1ME2 LINE L1 -10 6652 6581 335 303 120 11 chr10 58151675 58151850 -82164915 - L1ME2 LINE L1 -77 6585 6392 6011 100 24 0 chr10 58151852 58152704 -82164061 - L1PA10 LINE L1 0 6483 5612 3748 27 0 0 chr10 58152704 58153151 -82163614 + L1P LINE L1 4810 5256 -890 11318 153 4 4 chr10 58153253 58155212 -82161553 - L1PA10 LINE L1 -1102 5359 3401 726 251 6 6 chr10 58155203 58155382 -82161383 - L1PA10 LINE L1 -5694 181 3 * 1369 256 28 26 chr10 58155386 58155887 -82160878 - L1ME2 LINE L1 -263 6399 5898 324 248 0 38 chr10 58155890 58156023 -82160742 - L1ME2 LINE L1 -830 5814 5687 250 114 113 4 chr10 58156017 58156101 -82160664 - L1MB4 LINE L1 0 6180 6072 * 2407 210 68 6 chr10 58156088 58156883 -82159882 - L1ME2 LINE L1 -4343 2303 1182 3573 216 31 31 chr10 58156885 58157773 -82158992 + L1MB4 LINE L1 5292 6179 -1 1293 201 27 53 chr10 58157792 58158166 -82158599 - L1ME2 LINE L1 -5359 1183 820 305 226 26 128 chr10 58158267 58158510 -82158255 - L1ME2 LINE L1 -5709 937 491 1316 216 7 15 chr10 58158526 58158795 -82157970 + AluJo SINE Alu 29 295 -17 426 298 53 60 chr10 58158990 58159255 -82157510 - L1ME2 LINE L1 -6278 264 2 23 0 0 0 chr10 58159392 58159415 -82157350 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 58159437 58159466 -82157299 + AT_rich Low_complexity Low_complexity 1 29 0 6810 191 18 23 chr10 58160665 58162269 -82154496 + L1PA15 LINE L1 3322 4986 -1160 1074 97 0 0 chr10 58162261 58162406 -82154359 + L1PB1 LINE L1 5521 5665 -486 * 803 103 8 0 chr10 58162401 58162516 -82154249 - L1PB1 LINE L1 -243 5908 5790 * 189 0 0 0 chr10 58162516 58162537 -82154228 + (CA)n Simple_repeat Simple_repeat 2 22 0 288 224 0 0 chr10 58162547 58162614 -82154151 + (TA)n Simple_repeat Simple_repeat 1 67 0 1689 112 12 0 chr10 58162614 58162864 -82153901 + L1PB1 LINE L1 5898 6150 -1 22 0 0 0 chr10 58162865 58162887 -82153878 + AT_rich Low_complexity Low_complexity 1 22 0 5133 138 22 7 chr10 58162899 58164064 -82152701 + L1PA15 LINE L1 4980 6158 -7 353 332 53 43 chr10 58164100 58164287 -82152478 - MIR3 SINE MIR -4 204 16 209 230 81 58 chr10 58165266 58165353 -82151412 - MIR SINE MIR -99 163 75 23 68 0 0 chr10 58165400 58165444 -82151321 + AT_rich Low_complexity Low_complexity 1 44 0 280 311 111 0 chr10 58165982 58166117 -82150648 - MER46C DNA MER2_type -187 151 2 448 224 102 20 chr10 58166117 58166264 -82150501 + L2 LINE L2 3153 3311 -2 2172 82 20 0 chr10 58166282 58166585 -82150180 + L1PA13 LINE L1 5852 6160 -3 2203 115 0 25 chr10 58168737 58169058 -82147707 + AluSq SINE Alu 1 313 0 225 0 0 0 chr10 58169059 58169084 -82147681 + (CCA)n Simple_repeat Simple_repeat 1 25 0 200 111 22 0 chr10 58169511 58169556 -82147209 + (CAA)n Simple_repeat Simple_repeat 3 48 0 208 327 27 18 chr10 58170410 58170520 -82146245 - MIR SINE MIR -71 191 81 9049 219 36 6 chr10 58171235 58174263 -82142502 + L1MC1 LINE L1 2704 5827 -506 5882 280 57 31 chr10 58174348 58176516 -82140249 + L1PA16 LINE L1 2110 4333 -1813 356 179 26 0 chr10 58176518 58176596 -82140169 + L1MC1 LINE L1 4934 5013 -1133 * 5539 151 11 0 chr10 58176564 58177522 -82139243 + L1PA16 LINE L1 5180 6148 -18 2491 191 8 17 chr10 58177528 58178051 -82138714 + L1MC1 LINE L1 5816 6333 0 272 247 69 4 chr10 58178337 58178439 -82138326 + MIR SINE MIR 39 149 -63 2529 114 25 3 chr10 58179891 58180258 -82136507 - THE1C LTR MaLR 0 375 1 8770 124 43 85 chr10 58180258 58181907 -82134858 - THE1C-int LTR MaLR 0 1580 1 2537 110 19 11 chr10 58181907 58182279 -82134486 - THE1C LTR MaLR 0 375 1 512 317 72 5 chr10 58182319 58182527 -82134238 + MLT1J LTR MaLR 90 311 -200 35447 100 13 12 chr10 58183153 58189283 -82127482 + L1PA6 LINE L1 11 6141 -13 328 301 49 0 chr10 58189784 58189907 -82126858 - MIR SINE MIR -61 201 73 274 122 0 0 chr10 58189932 58189973 -82126792 + LTR29 LTR ERV1 1 41 -581 3260 122 26 20 chr10 58190014 58190553 -82126212 + MER41B LTR ERV1 1 542 -93 1122 234 44 10 chr10 58190666 58190961 -82125804 - LTR60 LTR ERV1 -53 533 229 802 199 16 142 chr10 58190955 58191266 -82125499 - LTR60 LTR ERV1 -301 285 14 * 2549 162 102 2 chr10 58191313 58191812 -82124953 + LTR29 LTR ERV1 63 611 -11 3401 171 48 10 chr10 58192239 58192829 -82123936 + LTR9 LTR ERV1 1 612 0 748 94 19 0 chr10 58192832 58192938 -82123827 + HUERS-P3 LTR ERV1 4 111 -8808 23645 151 111 104 chr10 58192942 58199590 -82117175 + HUERS-P3 LTR ERV1 266 6991 -473 708 148 102 8 chr10 58199706 58199834 -82116931 + LTR9 LTR ERV1 473 612 0 209 268 161 0 chr10 58199878 58199934 -82116831 + MIR SINE MIR 2 66 -196 4222 154 14 10 chr10 58199938 58200646 -82116119 + MER50 LTR ERV1 1 711 -23 668 299 32 0 chr10 58200650 58200837 -82115928 + MIR SINE MIR 70 262 0 323 145 35 55 chr10 58200845 58200990 -82115775 + (TATAA)n Simple_repeat Simple_repeat 5 146 0 721 181 24 0 chr10 58201195 58201322 -82115443 + FRAM SINE Alu 1 127 -49 204 97 0 0 chr10 58202628 58202659 -82114106 + (CA)n Simple_repeat Simple_repeat 2 32 0 318 177 0 104 chr10 58203545 58203641 -82113124 - L1MA10 LINE L1 0 6334 6249 1920 226 65 42 chr10 58203681 58204248 -82112517 - L1ME1 LINE L1 -191 6255 5676 * 5381 251 93 25 chr10 58204246 58207294 -82109471 - L1ME1 LINE L1 -1538 4888 1695 1561 280 213 12 chr10 58207311 58208224 -82108541 - L2 LINE L2 -4 3309 2191 395 284 53 18 chr10 58208433 58208658 -82108107 - L1ME1 LINE L1 -4997 1607 1197 775 235 45 36 chr10 58208672 58208893 -82107872 + MLT1D LTR MaLR 10 232 -273 222 118 0 0 chr10 58208954 58208988 -82107777 + (TA)n Simple_repeat Simple_repeat 2 35 0 263 137 0 20 chr10 58209072 58209123 -82107642 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 336 146 0 0 chr10 58209151 58209206 -82107559 + MLT2B1 LTR ERVL 464 518 -2 701 127 18 0 chr10 58209242 58209352 -82107413 - MSTB1 LTR MaLR 0 432 321 800 106 0 0 chr10 58209550 58209654 -82107111 + FLAM_C SINE Alu 19 122 -21 1536 169 0 86 chr10 58209685 58210023 -82106742 - MSTB1 LTR MaLR -123 309 1 679 149 0 33 chr10 58211697 58211818 -82104947 + FLAM_C SINE Alu 21 137 -6 25 51 0 0 chr10 58212066 58212105 -82104660 + AT_rich Low_complexity Low_complexity 1 39 0 3450 179 116 17 chr10 58212177 58212927 -82103838 - LTR1B LTR ERV1 0 826 3 748 249 80 48 chr10 58213126 58213375 -82103390 - MIR SINE MIR 0 262 6 22 35 0 0 chr10 58213913 58213942 -82102823 + AT_rich Low_complexity Low_complexity 1 29 0 200 176 0 39 chr10 58214523 58214574 -82102191 + T-rich Low_complexity Low_complexity 2 50 0 211 358 21 21 chr10 58214704 58214799 -82101966 + MIR SINE MIR 28 122 -140 * 216 213 0 82 chr10 58214778 58214839 -82101926 - L2 LINE L2 0 3313 3258 405 0 0 0 chr10 58217645 58217690 -82099075 + (TG)n Simple_repeat Simple_repeat 1 45 0 343 235 25 0 chr10 58217698 58217779 -82098986 - L2 LINE L2 -10 3303 3221 2828 123 15 31 chr10 58217963 58218442 -82098323 - L1PA16 LINE L1 0 6166 5696 1530 226 84 7 chr10 58218640 58219079 -82097686 - LTR65 LTR ERV1 -20 649 177 186 300 30 60 chr10 58219245 58219345 -82097420 - L2 LINE L2 -15 3298 3202 2037 148 0 0 chr10 58219429 58219719 -82097046 - AluSx SINE Alu -17 295 6 559 90 13 0 chr10 58219903 58219981 -82096784 - MADE1 DNA Mariner 0 80 2 195 372 22 29 chr10 58220036 58220173 -82096592 + L2 LINE L2 2949 3084 -188 407 210 82 29 chr10 58220339 58220545 -82096220 - LTR18A LTR ERVL 0 601 285 1484 158 0 0 chr10 58220646 58220880 -82095885 - HERVL18 LTR ERVL -5813 234 1 669 107 19 10 chr10 58220884 58220987 -82095778 + HERVL18 LTR ERVL 1707 1810 -4237 * 6577 140 21 13 chr10 58220986 58222380 -82094385 + HERVL18 LTR ERVL 2119 3580 -2467 418 102 0 0 chr10 58222381 58222440 -82094325 + HERVL18 LTR ERVL 4394 4452 -1595 * 561 198 0 0 chr10 58222431 58222522 -82094243 + HERVL18 LTR ERVL 5124 5214 -833 924 209 193 35 chr10 58222706 58223192 -82093573 + LTR18B LTR ERVL 1 601 -13 491 91 0 0 chr10 58223407 58223473 -82093292 + AluS SINE Alu 1 66 -247 1346 137 0 0 chr10 58223573 58223787 -82092978 + AluSq SINE Alu 101 314 0 651 289 59 51 chr10 58225710 58225746 -82091019 + MIR SINE MIR 1 35 -227 1272 120 101 0 chr10 58225746 58225955 -82090810 + MER30 DNA MER1_type 1 230 0 651 289 59 51 chr10 58225955 58226174 -82090591 + MIR SINE MIR 35 258 -4 236 309 99 0 chr10 58226326 58226407 -82090358 + L2 LINE L2 3147 3235 -37 2146 98 0 0 chr10 58227970 58228247 -82088518 + AluY SINE Alu 18 294 -17 530 248 54 20 chr10 58228553 58228702 -82088063 - MIR SINE MIR -20 242 89 1873 255 71 25 chr10 58229116 58230205 -82086560 + L1M4 LINE L1 1446 2744 -4081 1124 154 150 42 chr10 58230202 58230488 -82086277 + L1PA16 LINE L1 5849 6165 0 * 1411 249 75 12 chr10 58230513 58231019 -82085746 + L1M4 LINE L1 2700 3237 -3407 295 323 62 0 chr10 58231085 58231181 -82085584 + MIR SINE MIR 14 115 -147 244 259 0 0 chr10 58231610 58231668 -82085097 + (CA)n Simple_repeat Simple_repeat 2 59 0 1988 131 0 33 chr10 58232688 58232993 -82083772 - AluSc SINE Alu -14 295 1 334 326 98 30 chr10 58233146 58233278 -82083487 - MIR3 SINE MIR -27 181 41 1431 211 48 12 chr10 58233743 58234074 -82082691 + MLT1A1 LTR MaLR 10 352 -13 580 333 56 5 chr10 58234086 58234299 -82082466 - MIR SINE MIR -26 236 13 381 356 126 48 chr10 58284727 58285148 -82031617 - L2 LINE L2 -8 3264 2811 455 317 101 8 chr10 58285217 58285485 -82031280 + L3 LINE CR1 1177 1469 -108 256 281 109 62 chr10 58286622 58286750 -82030015 - MER5A DNA MER1_type -6 183 50 281 275 81 27 chr10 58287165 58287185 -82029580 - L1MA10 LINE L1 -3 6331 6312 909 235 110 4 chr10 58287185 58287449 -82029316 - L1ME1 LINE L1 -12 6154 5863 352 92 0 98 chr10 58287449 58287534 -82029231 - MLT2B1 LTR ERVL 0 520 440 255 232 0 0 chr10 58287534 58287616 -82029149 + (TA)n Simple_repeat Simple_repeat 1 82 0 698 264 31 0 chr10 58287616 58287775 -82028990 - MLT2D LTR ERVL -41 373 210 455 252 26 52 chr10 58287779 58287934 -82028831 + L1ME1 LINE L1 5954 6104 -62 655 237 16 42 chr10 58287935 58288057 -82028708 - MLT2D LTR ERVL -227 187 70 1981 149 3 0 chr10 58288057 58288352 -82028413 + AluSx SINE Alu 1 296 -16 655 237 16 42 chr10 58288352 58288419 -82028346 - MLT2D LTR ERVL -344 70 3 1215 230 86 73 chr10 58288434 58289335 -82027430 - L1MC3 LINE L1 -745 5401 4911 2191 153 53 60 chr10 58289344 58289729 -82027036 - L1PA15 LINE L1 0 6165 5782 1704 86 61 113 chr10 58289729 58290056 -82026709 - AluSx SINE Alu -2 310 1 2191 153 53 60 chr10 58290056 58290121 -82026644 - L1PA15 LINE L1 -383 5782 5718 1005 227 13 0 chr10 58290127 58290365 -82026400 - L1MC3 LINE L1 -1231 4915 4675 273 57 0 0 chr10 58291953 58291988 -82024777 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 228 278 33 53 chr10 58293191 58293342 -82023423 - HAL1 LINE L1 -54 2453 2306 21 57 0 0 chr10 58293375 58293410 -82023355 + AT_rich Low_complexity Low_complexity 1 35 0 231 271 0 47 chr10 58293575 58293682 -82023083 - HAL1b LINE L1 -501 847 746 731 199 99 0 chr10 58294028 58294199 -82022566 + MER5A DNA MER1_type 1 188 -1 386 183 25 7 chr10 58294470 58294575 -82022190 + MER63 DNA MER1_type 722 1685 -3 263 180 98 0 chr10 58294844 58294905 -82021860 + MER106A DNA MER1_type 113 179 -57 722 217 26 1 chr10 58295026 58295302 -82021463 - MLT1I LTR MaLR -5 404 91 523 371 14 0 chr10 58295523 58295736 -82021029 + L3 LINE CR1 1360 1575 -2 2075 171 56 30 chr10 58296562 58297079 -82019686 + MLT2A2 LTR ERVL 1 554 0 685 259 20 15 chr10 58298357 58298554 -82018211 + MIR SINE MIR 44 241 -21 581 297 42 10 chr10 58298694 58298886 -82017879 + MIR SINE MIR 65 262 0 546 313 71 0 chr10 58299137 58299335 -82017430 - MER58A DNA MER1_type -1 223 12 22 103 0 0 chr10 58299733 58299811 -82016954 + AT_rich Low_complexity Low_complexity 1 78 0 375 336 92 51 chr10 58300389 58300800 -82015965 + L2 LINE L2 2864 3291 -22 214 140 20 20 chr10 58300814 58300864 -82015901 + GA-rich Low_complexity Low_complexity 4 53 0 1727 179 10 0 chr10 58301399 58301701 -82015064 + AluSx SINE Alu 3 307 -5 200 322 35 35 chr10 58302808 58302895 -82013870 + MIR SINE MIR 106 192 -70 241 237 0 17 chr10 58304532 58304591 -82012174 - LTR33A LTR ERVL -2 521 464 11777 89 6 1 chr10 58304614 58307087 -82009678 + L1PA7 LINE L1 3655 6151 -3 2407 77 0 0 chr10 58308243 58308541 -82008224 + AluY SINE Alu 1 298 -13 2491 134 28 23 chr10 58309635 58309830 -82006935 - Tigger2a DNA MER2_type -2274 434 241 2025 135 18 9 chr10 58309830 58310164 -82006601 + MER1B DNA MER1_type 1 337 0 2491 134 28 23 chr10 58310164 58310400 -82006365 - Tigger2a DNA MER2_type -2467 241 1 217 320 90 88 chr10 58310603 58311093 -82005672 + L2 LINE L2 2804 3294 -19 284 277 0 15 chr10 58311108 58311173 -82005592 + L2 LINE L2 2976 3039 -274 1692 131 50 18 chr10 58311582 58311864 -82004901 + MER4D LTR ERV1 582 872 0 2956 129 5 101 chr10 58312089 58312724 -82004041 - MER4B LTR ERV1 -36 574 1 2031 128 0 3 chr10 58312889 58313203 -82003562 - AluSc SINE Alu 0 314 2 3142 119 138 67 chr10 58313250 58313922 -82002843 + LTR8A LTR ERV1 8 727 0 10735 30 0 0 chr10 58313945 58315215 -82001550 - L1PA4 LINE L1 -1046 5100 3831 7416 35 5 0 chr10 58315215 58316272 -82000493 + L1PA4 LINE L1 5092 6152 -3 1775 192 41 32 chr10 58316501 58316958 -81999807 - LTR2B LTR ERV1 0 490 1 1454 207 51 73 chr10 58317075 58317786 -81998979 + LTR9 LTR ERV1 1 779 0 3997 139 8 2 chr10 58317935 58318566 -81998199 - MER41B LTR ERV1 0 635 1 275 244 106 62 chr10 58318933 58319193 -81997572 + L1ME LINE L1 5528 5804 -438 282 350 55 24 chr10 58319252 58319543 -81997222 + L1MD2 LINE L1 120 419 -5700 993 283 91 9 chr10 58319626 58319944 -81996821 + LTR16C LTR ERVL 148 491 0 342 330 46 49 chr10 58319968 58320316 -81996449 + L1MD2 LINE L1 445 791 -5328 4863 221 38 17 chr10 58320574 58322776 -81993989 + L1MD2 LINE L1 4091 6340 -2 527 275 47 12 chr10 58322997 58323168 -81993597 + MIR SINE MIR 72 248 -14 281 26 26 0 chr10 58323282 58323320 -81993445 + (TC)n Simple_repeat Simple_repeat 2 40 0 423 0 0 0 chr10 58323320 58323367 -81993398 + (CA)n Simple_repeat Simple_repeat 1 47 0 869 101 57 25 chr10 58323425 58323584 -81993181 - L1MA1 LINE L1 -164 6138 5975 682 130 28 0 chr10 58323813 58323921 -81992844 - MIR SINE MIR -74 188 78 364 336 0 14 chr10 58324426 58324572 -81992193 - MIR SINE MIR -44 218 75 390 267 42 0 chr10 58324658 58324778 -81991987 + MIR SINE MIR 86 210 -52 2537 55 0 6 chr10 58327029 58327340 -81989425 - AluY SINE Alu -2 309 1 2060 91 7 0 chr10 58327340 58327616 -81989149 - AluSp SINE Alu -35 278 1 1687 179 20 37 chr10 58328721 58329074 -81987691 - Tigger7 DNA MER2_type 0 2487 2141 775 169 0 0 chr10 58329074 58329192 -81987573 - Tigger7 DNA MER2_type -2369 118 1 236 338 0 0 chr10 58330825 58330896 -81985869 + L2 LINE L2 1935 2005 -1309 355 197 0 0 chr10 58332208 58332274 -81984491 + MLT1J2 LTR MaLR 20 85 -365 362 234 0 0 chr10 58332557 58332634 -81984131 + MLT1J2 LTR MaLR 122 198 -252 453 298 147 0 chr10 58332700 58332891 -81983874 + MLT1J2 LTR MaLR 214 432 -18 216 333 0 0 chr10 58333177 58333240 -81983525 - MIR3 SINE MIR -43 165 103 2478 148 45 24 chr10 58333271 58333544 -81983221 - Tigger2a DNA MER2_type -2274 434 147 2266 203 55 45 chr10 58333544 58334150 -81982615 - LTR9 LTR ERV1 0 612 1 2478 148 45 24 chr10 58334150 58334301 -81982464 - Tigger2a DNA MER2_type -2561 147 1 23 0 0 0 chr10 58335611 58335634 -81981131 + AT_rich Low_complexity Low_complexity 1 23 0 209 213 0 0 chr10 58335841 58335888 -81980877 + A-rich Low_complexity Low_complexity 1 47 0 1559 194 25 0 chr10 58336575 58336859 -81979906 - AluJb SINE Alu -21 291 1 328 246 55 0 chr10 58336937 58337047 -81979718 + L1ME2 LINE L1 4430 4545 -1601 2004 230 83 71 chr10 58337055 58338045 -81978720 + L1ME2 LINE L1 5146 6149 -15 4450 157 7 20 chr10 58338350 58339117 -81977648 + Tigger2 DNA MER2_type 1 757 -1961 669 43 26 60 chr10 58339168 58339248 -81977517 + Tigger2 DNA MER2_type 2462 2538 -180 7297 128 59 13 chr10 58339248 58340487 -81976278 - HSMAR2 DNA Mariner -4 1298 3 669 43 26 60 chr10 58340487 58340523 -81976242 + Tigger2 DNA MER2_type 2538 2574 -144 627 190 33 0 chr10 58340578 58340699 -81976066 + Tigger2 DNA MER2_type 2539 2663 -55 2281 78 0 26 chr10 58340760 58341067 -81975698 + AluY SINE Alu 1 299 -12 349 233 184 25 chr10 58341162 58341325 -81975440 + Charlie8 DNA MER1_type 326 514 -1903 1973 133 0 7 chr10 58341482 58341782 -81974983 + AluSg SINE Alu 1 298 -12 326 187 27 0 chr10 58342634 58342709 -81974056 + (TATATG)n Simple_repeat Simple_repeat 1 77 0 21 0 0 0 chr10 58343147 58343168 -81973597 + AT_rich Low_complexity Low_complexity 1 21 0 2406 74 0 0 chr10 58343343 58343654 -81973111 - AluY SINE Alu 0 311 1 1368 218 14 45 chr10 58344822 58345197 -81971568 + MLT1A1 LTR MaLR 1 365 0 2344 76 3 0 chr10 58345377 58345679 -81971086 + AluY SINE Alu 1 303 -8 26 0 0 0 chr10 58345909 58345935 -81970830 + AT_rich Low_complexity Low_complexity 1 26 0 247 203 336 0 chr10 58345997 58346140 -81970625 + L1ME4a LINE L1 5833 6023 -98 2578 120 55 12 chr10 58346166 58346567 -81970198 - MSTA LTR MaLR -10 418 1 238 185 25 74 chr10 58346614 58346695 -81970070 + L2 LINE L2 2239 2315 -999 201 162 0 0 chr10 58346702 58346739 -81970026 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 328 203 7 142 chr10 58346740 58346888 -81969877 - L2 LINE L2 0 3313 3186 430 337 207 34 chr10 58347215 58347883 -81968882 + L2 LINE L2 28 810 -2504 1626 272 115 25 chr10 58348087 58348723 -81968042 + L2 LINE L2 805 1497 -1817 327 285 109 47 chr10 58348723 58348916 -81967849 + L2 LINE L2 1409 1613 -1701 472 252 38 76 chr10 58348966 58349256 -81967509 - L1MEd LINE L1 -4910 1209 931 21 0 0 0 chr10 58349428 58349449 -81967316 + AT_rich Low_complexity Low_complexity 1 21 0 1115 195 28 9 chr10 58350048 58350263 -81966502 + L1M3e LINE L1 7 225 -6805 4076 166 47 12 chr10 58350263 58351113 -81965652 + L1MA8 LINE L1 5412 6291 0 25 31 0 0 chr10 58351113 58351145 -81965620 + AT_rich Low_complexity Low_complexity 1 32 0 448 353 22 63 chr10 58351761 58352124 -81964641 - L2 LINE L2 0 3313 2966 11316 66 9 1 chr10 58352206 58353697 -81963068 - L1P LINE L1 -1444 4702 3200 5295 79 5 7 chr10 58353694 58354430 -81962335 + L1P LINE L1 2486 3220 -2926 * 505 317 44 44 chr10 58354881 58355269 -81961496 - HAL1b LINE L1 -621 727 340 285 98 0 0 chr10 58355524 58355565 -81961200 + (TG)n Simple_repeat Simple_repeat 1 41 0 2303 97 0 0 chr10 58355611 58355919 -81960846 - AluY SINE Alu -3 308 1 1746 174 20 0 chr10 58355919 58356217 -81960548 - AluJb SINE Alu -8 304 1 24 0 0 0 chr10 58356223 58356247 -81960518 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 58356516 58356549 -81960216 + AT_rich Low_complexity Low_complexity 1 33 0 1591 164 61 0 chr10 58356828 58357091 -81959674 + AluSx SINE Alu 3 281 -31 183 42 0 0 chr10 58357094 58357118 -81959647 + (TA)n Simple_repeat Simple_repeat 2 25 0 293 308 29 29 chr10 58357570 58357674 -81959091 - MER5A DNA MER1_type -7 182 79 233 234 222 48 chr10 58357728 58357895 -81958870 + MIR SINE MIR 7 202 -60 353 248 59 40 chr10 58358013 58358114 -81958651 + L2 LINE L2 3210 3312 -1 2091 97 0 17 chr10 58358166 58358488 -81958277 + AluY SINE Alu 1 317 0 271 242 50 20 chr10 58358511 58358610 -81958155 + MIR SINE MIR 105 206 -56 22 35 0 0 chr10 58358957 58358986 -81957779 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 58359272 58359293 -81957472 + AT_rich Low_complexity Low_complexity 1 21 0 238 280 30 50 chr10 58359701 58359801 -81956964 - MIR SINE MIR -94 114 17 1490 123 43 0 chr10 58359889 58360124 -81956641 + MER57B LTR ERV1 190 434 0 387 325 8 8 chr10 58360342 58360459 -81956306 - MLT1J LTR MaLR -289 222 106 248 324 43 58 chr10 58360650 58360857 -81955908 - MLT1K LTR MaLR -283 305 102 639 269 128 32 chr10 58361328 58361759 -81955006 + HAL1 LINE L1 1260 1731 -776 278 203 25 13 chr10 58361981 58362060 -81954705 - MER116 DNA Mariner 0 80 1 397 276 54 27 chr10 58362092 58362313 -81954452 + HAL1 LINE L1 2278 2504 -3 21 57 0 0 chr10 58362341 58362376 -81954389 + AT_rich Low_complexity Low_complexity 1 35 0 453 232 71 0 chr10 58363354 58363466 -81953299 + MIR SINE MIR 134 253 -9 1580 188 10 29 chr10 58363641 58363955 -81952810 + AluJo SINE Alu 1 308 -4 2233 119 37 8 chr10 58365467 58365821 -81950944 + THE1B LTR MaLR 1 364 0 1297 291 102 14 chr10 58366350 58366848 -81949917 + L1ME2 LINE L1 3 544 -5526 * 2152 257 81 44 chr10 58366831 58367946 -81948819 + L1ME2 LINE L1 4397 5593 -505 270 0 0 0 chr10 58367946 58367976 -81948789 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2152 257 81 44 chr10 58367976 58368465 -81948300 + L1ME2 LINE L1 5593 6062 -36 1072 317 34 16 chr10 58369012 58369400 -81947365 + MLT1I LTR MaLR 6 400 -9 619 331 25 16 chr10 58371035 58371280 -81945485 + MIR SINE MIR 10 256 -6 449 278 44 56 chr10 58371512 58371692 -81945073 + MLT1I LTR MaLR 232 409 0 794 231 71 0 chr10 58371933 58372115 -81944650 + L1ME1 LINE L1 5967 6161 -5 362 265 72 81 chr10 58372145 58372368 -81944397 + L1MC/D LINE L1 5398 5618 -2190 2175 156 43 50 chr10 58373329 58373766 -81942999 + Tigger2a DNA MER2_type 1 434 0 1346 170 17 129 chr10 58377042 58377453 -81939312 + MLT1A1 LTR MaLR 1 365 0 707 171 0 8 chr10 58377684 58377807 -81938958 - FRAM SINE Alu -25 151 30 242 132 0 0 chr10 58377814 58377852 -81938913 + Alu SINE Alu 25 62 -113 781 170 0 15 chr10 58377887 58378022 -81938743 - FLAM_C SINE Alu 0 133 1 22 70 0 0 chr10 58378024 58378067 -81938698 + AT_rich Low_complexity Low_complexity 1 43 0 593 296 101 20 chr10 58378372 58378571 -81938194 - MIR SINE MIR -25 237 23 227 388 35 0 chr10 58378798 58378914 -81937851 + MIR3 SINE MIR 81 200 -8 641 294 105 4 chr10 58381492 58381730 -81935035 + MIR SINE MIR 1 262 0 1370 226 62 48 chr10 58381747 58382243 -81934522 + MLT1D LTR MaLR 1 503 -2 21 0 0 0 chr10 58382343 58382364 -81934401 + AT_rich Low_complexity Low_complexity 1 21 0 1384 198 12 50 chr10 58382364 58382458 -81934307 + AluJo SINE Alu 1 97 -215 1894 143 77 34 chr10 58382458 58382807 -81933958 - THE1B LTR MaLR 0 364 1 1384 198 12 50 chr10 58382807 58383035 -81933730 + AluJo SINE Alu 97 311 -1 220 333 161 0 chr10 58383400 58383493 -81933272 - MER91C DNA MER1_type -32 108 1 273 57 0 0 chr10 58384931 58384966 -81931799 + (TAA)n Simple_repeat Simple_repeat 2 36 0 23 86 0 0 chr10 58385116 58385174 -81931591 + AT_rich Low_complexity Low_complexity 1 58 0 6821 72 0 0 chr10 58385380 58386695 -81930070 + L1PA7 LINE L1 4840 6154 0 21 82 0 0 chr10 58386704 58386753 -81930012 + AT_rich Low_complexity Low_complexity 1 49 0 1158 288 65 30 chr10 58387878 58388941 -81927824 + L1MCc LINE L1 1129 2447 -4675 564 285 84 18 chr10 58389038 58389502 -81927263 + L1MCc LINE L1 2749 3207 -3734 798 230 66 91 chr10 58389616 58389976 -81926789 - L1MC5 LINE L1 -303 7658 7313 1407 108 17 22 chr10 58389976 58390207 -81926558 + L1PA11 LINE L1 5942 6171 -3 798 230 66 91 chr10 58390207 58390360 -81926405 - L1MC5 LINE L1 -648 7313 7158 269 360 29 34 chr10 58390484 58390659 -81926106 - L2 LINE L2 -24 3289 3116 2106 114 10 7 chr10 58391176 58391475 -81925290 - AluSq SINE Alu -13 300 1 456 261 131 45 chr10 58391774 58391973 -81924792 + MIR SINE MIR 16 231 -31 10801 154 45 28 chr10 58393415 58393796 -81922969 + L1MA6 LINE L1 2860 3233 -3058 2304 86 0 29 chr10 58393796 58394111 -81922654 + AluY SINE Alu 1 306 -5 10801 154 45 28 chr10 58394111 58396553 -81920212 + L1MA6 LINE L1 3233 5728 -563 6278 83 19 12 chr10 58396553 58397544 -81919221 + L1PA10 LINE L1 5172 6168 0 10801 154 45 28 chr10 58397544 58397758 -81919007 + L1MA6 LINE L1 5728 5937 -354 1198 133 17 6 chr10 58397762 58397942 -81918823 + AluJb SINE Alu 118 299 -13 1618 169 51 25 chr10 58397942 58398297 -81918468 + L1MA6 LINE L1 5936 6299 -1 204 67 0 0 chr10 58399208 58399238 -81917527 + (A)n Simple_repeat Simple_repeat 1 30 0 704 319 52 0 chr10 58399766 58400014 -81916751 - MIR SINE MIR 0 262 2 423 265 110 60 chr10 58400101 58400301 -81916464 + L2 LINE L2 2243 2452 -862 1452 216 119 67 chr10 58400331 58400863 -81915902 + MLT1F1 LTR MaLR 13 567 0 981 266 48 4 chr10 58400865 58401117 -81915648 + L2 LINE L2 2453 2715 -599 21 36 0 0 chr10 58401849 58401877 -81914888 + AT_rich Low_complexity Low_complexity 1 28 0 1041 269 64 71 chr10 58402115 58402819 -81913946 + MER77 LTR ERV1 24 599 -6 457 245 112 101 chr10 58402907 58403215 -81913550 + L2 LINE L2 2700 3005 -308 1802 164 3 23 chr10 58403245 58403574 -81913191 + AluJo SINE Alu 1 323 0 801 225 9 164 chr10 58404436 58404477 -81912288 + MLT2B1 LTR ERVL 1 47 -473 1615 190 0 23 chr10 58404477 58404782 -81911983 + AluJb SINE Alu 1 298 -14 801 225 9 164 chr10 58404782 58405167 -81911598 + MLT2B1 LTR ERVL 47 361 -159 1681 167 6 48 chr10 58405384 58405695 -81911070 + AluJo SINE Alu 1 298 -14 468 301 92 32 chr10 58407498 58407814 -81908951 - L1ME4a LINE L1 -25 6096 5762 330 279 78 31 chr10 58407919 58408101 -81908664 + MLT1J1 LTR MaLR 5 213 -237 387 287 79 55 chr10 58408703 58408867 -81907898 - MIR3 SINE MIR -26 182 15 248 279 25 25 chr10 58409207 58409286 -81907479 - L2 LINE L2 -200 3072 2994 1829 121 4 15 chr10 58410591 58410863 -81905902 + AluSx SINE Alu 44 312 0 535 63 13 0 chr10 58410869 58410948 -81905817 + L1PA7 LINE L1 6075 6154 0 936 233 143 36 chr10 58412296 58412653 -81904112 + MLT1I LTR MaLR 15 409 0 5899 59 5 3 chr10 58413679 58414429 -81902336 + L1PA8 LINE L1 5421 6172 0 2159 105 3 0 chr10 58414441 58414793 -81901972 + AluSq SINE Alu 1 353 0 1690 137 18 62 chr10 58415148 58415484 -81901281 + L1MC1 LINE L1 6008 6328 -5 416 348 59 29 chr10 58415656 58415860 -81900905 - MIR SINE MIR -38 224 15 378 330 219 26 chr10 58416137 58416584 -81900181 - L2 LINE L2 -217 3055 2506 731 227 78 28 chr10 58418075 58418357 -81898408 + LTR37A LTR ERV1 123 418 -8 345 273 30 0 chr10 58418377 58418476 -81898289 - L3 LINE CR1 -74 1503 1402 1131 199 54 43 chr10 58418582 58418915 -81897850 + MER33 DNA MER1_type 1 324 0 320 285 23 31 chr10 58418928 58419058 -81897707 - L3 LINE CR1 -334 1243 1115 517 311 204 22 chr10 58419845 58420247 -81896518 - L3 LINE CR1 -918 659 185 326 257 140 37 chr10 58420300 58420436 -81896329 + MIR SINE MIR 13 162 -100 186 322 112 46 chr10 58420747 58420899 -81895866 + MIR SINE MIR 25 186 -76 201 192 19 0 chr10 58421013 58421065 -81895700 + (TTAAA)n Simple_repeat Simple_repeat 5 57 0 339 355 90 23 chr10 58421161 58421460 -81895305 + L2 LINE L2 2456 2774 -540 23 68 0 0 chr10 58421620 58421664 -81895101 + AT_rich Low_complexity Low_complexity 1 44 0 1448 148 0 0 chr10 58421854 58422063 -81894702 - AluJb SINE Alu -18 294 86 203 356 20 20 chr10 58422110 58422211 -81894554 - MIR SINE MIR -113 149 49 239 375 32 24 chr10 58423428 58423676 -81893089 + L2 LINE L2 2576 2825 -489 528 316 47 87 chr10 58424011 58424457 -81892308 + L2 LINE L2 2841 3268 -4 193 310 17 0 chr10 58424886 58424944 -81891821 + MIR SINE MIR 64 122 -86 354 236 169 0 chr10 58424946 58425035 -81891730 - LTR16C LTR ERVL 0 491 388 795 296 45 16 chr10 58425115 58425358 -81891407 - LTR16C LTR ERVL -241 250 1 210 200 109 0 chr10 58425359 58425414 -81891351 + MIR SINE MIR 120 180 -82 1566 185 3 7 chr10 58425665 58425963 -81890802 + AluJo SINE Alu 11 307 -5 293 349 66 13 chr10 58426112 58426264 -81890501 - MIR3 SINE MIR -38 170 11 629 271 92 19 chr10 58426931 58427138 -81889627 + MIR SINE MIR 20 241 -21 1452 252 68 20 chr10 58427297 58427737 -81889028 + MLT1C LTR MaLR 6 466 -1 740 234 59 16 chr10 58427748 58428004 -81888761 + LTR37B LTR ERV1 199 465 -3 1843 152 14 0 chr10 58428010 58428306 -81888459 + AluJb SINE Alu 7 306 -6 228 139 0 0 chr10 58428638 58428681 -81888084 - L1MA6 LINE L1 0 6300 6258 189 350 26 60 chr10 58429731 58429848 -81886917 + MIR SINE MIR 24 136 -72 260 219 131 7 chr10 58429951 58430088 -81886677 + L1ME4a LINE L1 5767 5920 -201 378 271 90 0 chr10 58430689 58430822 -81885943 + MER103 DNA DNA 20 164 -2 2427 79 6 3 chr10 58431078 58431408 -81885357 - L1PA7 LINE L1 -1 6153 5823 528 248 23 8 chr10 58431628 58431757 -81885008 - Charlie8 DNA MER1_type -2161 256 126 392 133 95 38 chr10 58431770 58431875 -81884890 - L1MB8 LINE L1 -21 6157 6047 1453 114 80 0 chr10 58433561 58433824 -81882941 + L1MA6 LINE L1 6017 6300 0 260 222 37 9 chr10 58433834 58433942 -81882823 + (TA)n Simple_repeat Simple_repeat 2 112 0 2564 181 83 22 chr10 58435046 58435162 -81881603 - L1MA9 LINE L1 -37 6275 6168 396 0 0 0 chr10 58435162 58435206 -81881559 + (TG)n Simple_repeat Simple_repeat 1 44 0 2564 181 83 22 chr10 58435206 58435692 -81881073 - L1MA9 LINE L1 -144 6168 5636 319 209 108 72 chr10 58435780 58435919 -81880846 + MER5A DNA MER1_type 46 189 0 281 336 29 19 chr10 58436130 58436234 -81880531 - MIR SINE MIR -87 121 17 180 0 0 0 chr10 58436278 58436298 -81880467 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 461 341 45 0 chr10 58436301 58436477 -81880288 - MIR SINE MIR -8 254 71 1985 194 84 26 chr10 58437075 58437538 -81879227 + LTR2B LTR ERV1 1 490 0 340 276 59 9 chr10 58438671 58438801 -81877964 - MLT1I LTR MaLR -249 160 24 387 304 8 24 chr10 58438824 58438949 -81877816 - L3 LINE CR1 -340 1237 1115 555 313 101 60 chr10 58439091 58439431 -81877334 - L3 LINE CR1 -451 1126 754 4560 90 11 2 chr10 58439431 58440075 -81876690 + L1PB2 LINE L1 5497 6146 -5 555 313 101 60 chr10 58440075 58440281 -81876484 - L3 LINE CR1 -823 754 558 8553 62 2 3 chr10 58440435 58441507 -81875258 + MER11C LTR ERVK 1 1071 0 378 317 70 0 chr10 58441600 58441742 -81875023 + MIR3 SINE MIR 54 205 -3 22 0 0 0 chr10 58442094 58442116 -81874649 + AT_rich Low_complexity Low_complexity 1 22 0 598 259 83 31 chr10 58443384 58443688 -81873077 - MLT1I LTR MaLR -49 360 61 6554 84 27 82 chr10 58444550 58450426 -81866339 - L1PA7 LINE L1 -3 6151 663 290 256 198 0 chr10 58450431 58450552 -81866213 - MIR SINE MIR -71 191 47 22 0 0 0 chr10 58450768 58450790 -81865975 + AT_rich Low_complexity Low_complexity 1 22 0 1029 199 13 30 chr10 58451606 58451837 -81864928 - MLT1A1 LTR MaLR -2 363 137 1017 177 139 25 chr10 58451849 58452086 -81864679 - AluJb SINE Alu -39 273 10 671 169 8 15 chr10 58452396 58452526 -81864239 + MSTD LTR MaLR 268 396 0 651 187 8 8 chr10 58452530 58452664 -81864101 - MLT1A1 LTR MaLR -231 134 1 548 222 261 15 chr10 58453083 58453286 -81863479 + MIR SINE MIR 10 262 0 1562 216 0 20 chr10 58453519 58453824 -81862941 + AluJb SINE Alu 1 299 -13 261 261 0 0 chr10 58454134 58454199 -81862566 - Charlie8 DNA MER1_type 0 2417 2353 248 290 75 51 chr10 58454259 58454303 -81862462 - Charlie8 DNA MER1_type -69 272 231 1829 150 67 22 chr10 58454303 58454662 -81862103 - THE1C LTR MaLR 0 375 1 248 290 75 51 chr10 58454662 58454831 -81861934 - Charlie8 DNA MER1_type -110 231 54 356 322 77 21 chr10 58454981 58455124 -81861641 + L2 LINE L2 3121 3271 -1 3533 149 18 17 chr10 58455284 58455886 -81860879 - LTR26 LTR ERV1 0 603 1 197 143 29 0 chr10 58456703 58456738 -81860027 - MIR SINE MIR -71 191 156 1641 268 96 10 chr10 58457085 58457597 -81859168 - MLT1E3 LTR MaLR 0 624 69 25 31 0 0 chr10 58458799 58458831 -81857934 + AT_rich Low_complexity Low_complexity 1 32 0 661 306 109 38 chr10 58459400 58459930 -81856835 + MER90 LTR ERV1 1 607 -7 1942 140 28 0 chr10 58459932 58460217 -81856548 - AluSx SINE Alu -19 293 1 1046 281 67 83 chr10 58460365 58460935 -81855830 + MLT1G LTR MaLR 1 548 -42 273 330 122 0 chr10 58461010 58461231 -81855534 + MLT1G-int LTR MaLR 294 541 -830 1093 248 72 116 chr10 58462279 58462831 -81853934 + MLT1G LTR MaLR 1 524 -66 234 91 0 0 chr10 58462909 58462942 -81853823 + (TC)n Simple_repeat Simple_repeat 2 34 0 744 151 78 12 chr10 58462943 58463109 -81853656 - MER3 DNA MER1_type -78 131 2 273 256 0 132 chr10 58463141 58463262 -81853503 - MER102b DNA MER1_type 0 341 237 5017 114 15 57 chr10 58463557 58463724 -81853041 - L1PB3 LINE L1 -2 6152 5979 303 28 0 0 chr10 58463724 58463760 -81853005 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2163 115 3 0 chr10 58463760 58464047 -81852718 - AluSx SINE Alu -24 288 1 5017 114 15 57 chr10 58464047 58464612 -81852153 - L1PB3 LINE L1 -174 5980 5475 2097 99 7 3 chr10 58464612 58464896 -81851869 + AluSx SINE Alu 16 300 -12 5017 114 15 57 chr10 58464896 58465206 -81851559 - L1PB3 LINE L1 -679 5475 5153 1964 107 0 4 chr10 58465273 58465536 -81851229 - AluSx SINE Alu -16 296 35 11335 84 0 13 chr10 58466060 58467730 -81849035 + L1PA7 LINE L1 3340 4987 -1159 756 128 0 0 chr10 58467730 58467839 -81848926 + AluSg/x SINE Alu 172 280 -32 1655 72 0 0 chr10 58467843 58468066 -81848699 + L1PA7 LINE L1 5898 6120 -34 1636 225 85 13 chr10 58468263 58468721 -81848044 + MER76 LTR ERV 1 491 -197 387 313 25 6 chr10 58468770 58468930 -81847835 - L1M4 LINE L1 -2019 4127 3965 7543 31 0 0 chr10 58468940 58470128 -81846637 - L1PA4 LINE L1 -3 6152 4964 * 7795 20 0 0 chr10 58470122 58471122 -81845643 + L1PA3 LINE L1 5156 6155 0 21 0 0 0 chr10 58471128 58471149 -81845616 + AT_rich Low_complexity Low_complexity 1 21 0 936 203 72 27 chr10 58471443 58471665 -81845100 + MER21B LTR ERV1 561 792 -71 221 305 0 61 chr10 58472392 58472474 -81844291 + MER5A DNA MER1_type 27 103 -86 2363 89 0 0 chr10 58472799 58473090 -81843675 - AluSc SINE Alu -18 291 1 515 124 31 0 chr10 58474934 58475031 -81841734 + L1M4 LINE L1 5706 5805 -369 710 211 72 11 chr10 58475699 58475879 -81840886 + MIR SINE MIR 72 262 0 246 221 0 44 chr10 58475926 58475994 -81840771 - MER103 DNA DNA -80 86 22 2533 55 0 3 chr10 58476836 58477143 -81839622 + AluY SINE Alu 1 306 -5 1981 201 103 34 chr10 58477378 58477965 -81838800 - MLT1E2 LTR MaLR 0 626 1 420 296 45 0 chr10 58478339 58478471 -81838294 + L2 LINE L2 3125 3262 -10 255 61 0 0 chr10 58478479 58478512 -81838253 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 2360 162 67 2 chr10 58478855 58479306 -81837459 - MER68 LTR ERV1 -69 493 14 33 0 0 0 chr10 58479987 58480020 -81836745 + AT_rich Low_complexity Low_complexity 1 33 0 276 376 56 0 chr10 58480077 58480202 -81836563 - L2 LINE L2 -16 3256 3125 2339 53 0 3 chr10 58480468 58480797 -81835968 - AluY SINE Alu 0 328 1 540 279 55 75 chr10 58480803 58481150 -81835615 + L2 LINE L2 1495 1834 -1480 14701 83 6 25 chr10 58481255 58482361 -81834404 - L1PA7 LINE L1 -5 6149 5023 207 0 0 0 chr10 58482361 58482384 -81834381 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 14701 83 6 25 chr10 58482384 58484210 -81832555 - L1PA7 LINE L1 -1131 5023 3253 6906 53 8 11 chr10 58485148 58486098 -81830667 + L1PA7 LINE L1 5208 6154 0 677 259 69 16 chr10 58486664 58486911 -81829854 - L1MEc LINE L1 -6092 304 45 297 0 0 0 chr10 58486929 58486962 -81829803 + (CA)n Simple_repeat Simple_repeat 2 34 0 228 292 0 0 chr10 58486985 58487074 -81829691 - L1MC4 LINE L1 -1339 6703 6615 374 204 11 0 chr10 58487081 58487169 -81829596 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 629 294 105 4 chr10 58488241 58488479 -81828286 + MIR SINE MIR 1 262 0 1367 226 62 48 chr10 58488496 58488992 -81827773 + MLT1D LTR MaLR 1 503 -2 21 0 0 0 chr10 58489092 58489113 -81827652 + AT_rich Low_complexity Low_complexity 1 21 0 1436 198 12 50 chr10 58489113 58489207 -81827558 + AluJo SINE Alu 1 97 -215 1899 141 81 35 chr10 58489207 58489555 -81827210 - THE1B LTR MaLR 0 364 1 1436 198 12 50 chr10 58489555 58489783 -81826982 + AluJo SINE Alu 97 311 -1 232 333 161 0 chr10 58490148 58490241 -81826524 - MER91C DNA MER1_type -32 108 1 29 0 0 0 chr10 58491675 58491704 -81825061 + AT_rich Low_complexity Low_complexity 1 29 0 23 86 0 0 chr10 58491862 58491920 -81824845 + AT_rich Low_complexity Low_complexity 1 58 0 6832 72 0 0 chr10 58492126 58493441 -81823324 + L1PA7 LINE L1 4840 6154 0 21 82 0 0 chr10 58493450 58493499 -81823266 + AT_rich Low_complexity Low_complexity 1 49 0 636 262 71 43 chr10 58494624 58494948 -81821817 + L1MCc LINE L1 1129 1461 -4962 939 277 59 29 chr10 58495005 58495687 -81821078 + L1MCc LINE L1 1548 2371 -4570 465 287 84 17 chr10 58495784 58496248 -81820517 + L1MCc LINE L1 2749 3207 -3734 623 216 72 97 chr10 58496362 58496722 -81820043 - L1MC5 LINE L1 -303 7658 7313 1435 108 17 22 chr10 58496722 58496953 -81819812 + L1PA11 LINE L1 5942 6171 -3 623 216 72 97 chr10 58496953 58497106 -81819659 - L1MC5 LINE L1 -648 7313 7158 254 360 29 34 chr10 58497230 58497405 -81819360 - L2 LINE L2 -24 3289 3116 2151 114 10 7 chr10 58497922 58498221 -81818544 - AluSq SINE Alu -13 300 1 465 261 131 45 chr10 58498520 58498719 -81818046 + MIR SINE MIR 16 231 -31 1511 148 93 5 chr10 58500161 58500538 -81816227 + L1 LINE L1 2860 3269 -2877 2050 121 3 29 chr10 58500542 58500849 -81815916 + AluY SINE Alu 1 299 -12 1053 209 159 7 chr10 58500849 58501151 -81815614 + L1MB5 LINE L1 5819 6166 -8 2090 136 3 3 chr10 58501236 58501530 -81815235 - AluSq SINE Alu -14 299 6 25 0 0 0 chr10 58501970 58501995 -81814770 + AT_rich Low_complexity Low_complexity 1 25 0 3066 142 24 4 chr10 58502007 58502544 -81814221 - MER50 LTR ERV1 -186 548 1 6930 201 10 7 chr10 58503021 58504583 -81812182 + L1P LINE L1 1073 2639 -3507 354 130 0 0 chr10 58504587 58504641 -81812124 + THE1-int LTR MaLR 616 669 -911 284 271 31 21 chr10 58506130 58506226 -81810539 - MIR SINE MIR -60 202 106 524 114 0 0 chr10 58506262 58506341 -81810424 - THE1A LTR MaLR -77 278 200 622 293 117 21 chr10 58506443 58506733 -81810032 + L2 LINE L2 2996 3313 0 2638 85 8 0 chr10 58506775 58507127 -81809638 - THE1A LTR MaLR 0 355 1 11010 100 3 0 chr10 58507127 58508202 -81808563 - THE1A-int LTR MaLR 0 1580 498 195 69 0 0 chr10 58508202 58508231 -81808534 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 11010 100 3 0 chr10 58508231 58508707 -81808058 - THE1A-int LTR MaLR -1082 498 25 2526 100 11 0 chr10 58508707 58509058 -81807707 - THE1A LTR MaLR 0 355 1 207 181 42 0 chr10 58509757 58509829 -81806936 + CT-rich Low_complexity Low_complexity 2 76 0 243 114 0 0 chr10 58509829 58509873 -81806892 + (CA)n Simple_repeat Simple_repeat 1 44 0 25 31 0 0 chr10 58510273 58510305 -81806460 + AT_rich Low_complexity Low_complexity 1 32 0 231 114 0 0 chr10 58510600 58510635 -81806130 + (TG)n Simple_repeat Simple_repeat 2 36 0 826 319 86 6 chr10 58510635 58510961 -81805804 - L2 LINE L2 -576 2738 2387 266 290 170 0 chr10 58511730 58511830 -81804935 - L2 LINE L2 -18 3254 3138 200 345 119 72 chr10 58512254 58512406 -81804359 + L2 LINE L2 2826 2970 -302 1592 166 9 66 chr10 58512406 58512726 -81804039 - AluJo SINE Alu -10 302 1 200 345 119 72 chr10 58512726 58512918 -81803847 + L2 LINE L2 2970 3186 -86 611 254 197 0 chr10 58512932 58513125 -81803640 + MIR SINE MIR 3 233 -29 245 245 78 69 chr10 58514374 58514476 -81802289 - L2 LINE L2 -2 3270 3168 735 270 76 8 chr10 58515175 58515412 -81801353 - LTR16A LTR ERVL -12 438 186 373 228 0 43 chr10 58516050 58516142 -81800623 - L2 LINE L2 0 3272 3185 208 336 26 26 chr10 58516923 58517039 -81799726 - L2 LINE L2 -466 2848 2733 867 252 5 14 chr10 58517254 58517464 -81799301 + MIR SINE MIR 41 248 -14 5427 122 15 40 chr10 58517965 58518132 -81798633 - L1PB3 LINE L1 -2 6152 5982 384 22 0 0 chr10 58518132 58518177 -81798588 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2137 118 3 0 chr10 58518177 58518464 -81798301 - AluSx SINE Alu -24 288 1 5427 122 15 40 chr10 58518464 58519029 -81797736 - L1PB3 LINE L1 -171 5983 5405 2097 99 7 3 chr10 58519029 58519313 -81797452 + AluSx SINE Alu 16 300 -12 5427 122 15 40 chr10 58519313 58520077 -81796688 - L1PB3 LINE L1 -749 5405 4692 1311 203 20 0 chr10 58520070 58520365 -81796400 - L1PB3 LINE L1 -1722 4424 4124 * 353 213 57 166 chr10 58520368 58520579 -81796186 - MIR SINE MIR -39 223 36 1058 221 18 0 chr10 58520638 58520918 -81795847 + L1MD3 LINE L1 7711 7995 0 764 299 25 47 chr10 58522072 58522442 -81794323 - LTR16A1 LTR ERVL -1 476 106 2404 72 0 10 chr10 58522500 58522804 -81793961 + AluY SINE Alu 1 301 -10 430 136 0 37 chr10 58523697 58523778 -81792987 + MADE1 DNA Mariner 1 78 -2 334 240 70 10 chr10 58523787 58523887 -81792878 - MIR3 SINE MIR -9 199 94 2353 132 74 19 chr10 58524714 58525147 -81791618 + LTR32 LTR ERVL 15 471 0 256 297 72 14 chr10 58525151 58525289 -81791476 + MIR SINE MIR 105 250 -12 295 236 127 18 chr10 58525909 58526019 -81790746 + MIR SINE MIR 99 220 -42 1961 137 0 3 chr10 58526082 58526396 -81790369 + AluSx SINE Alu 1 313 0 1960 158 17 0 chr10 58526957 58527249 -81789516 + AluJb SINE Alu 7 303 -9 670 202 107 12 chr10 58527292 58527460 -81789305 - MIR SINE MIR -2 260 77 254 248 287 8 chr10 58528348 58528477 -81788288 - L2 LINE L2 -3 3310 3146 791 297 106 27 chr10 58528612 58529093 -81787672 + LTR33 LTR ERVL 3 521 0 264 358 60 15 chr10 58529172 58529306 -81787459 - L2 LINE L2 -7 3265 3126 183 203 14 108 chr10 58529489 58529563 -81787202 - L2 LINE L2 -175 3097 3031 205 365 70 17 chr10 58530571 58530686 -81786079 - L2 LINE L2 -50 3222 3102 2200 111 159 5 chr10 58530758 58531129 -81785636 + MSTA LTR MaLR 1 428 0 2054 148 0 7 chr10 58532073 58532370 -81784395 - AluSx SINE Alu -17 295 1 2159 149 48 2 chr10 58532616 58533012 -81783753 + Tigger2 DNA MER2_type 2281 2694 -24 24 0 0 0 chr10 58533272 58533296 -81783469 + AT_rich Low_complexity Low_complexity 1 24 0 287 241 36 24 chr10 58533912 58533995 -81782770 + GA-rich Low_complexity Low_complexity 5 88 0 362 307 104 22 chr10 58534001 58534627 -81782138 + L1M4 LINE L1 4152 4828 -1318 373 198 50 10 chr10 58535046 58535147 -81781618 + MLT1I LTR MaLR 305 409 0 528 278 46 23 chr10 58535158 58535504 -81781261 + L1M4 LINE L1 4943 5296 -850 1554 180 0 4 chr10 58536055 58536316 -81780449 + AluJb SINE Alu 1 260 -52 2912 210 49 39 chr10 58536333 58537187 -81779578 + L1MD2 LINE L1 4846 5690 -669 2133 179 19 27 chr10 58537187 58537600 -81779165 - MLT2D LTR ERVL 0 414 5 2912 210 49 39 chr10 58537600 58537907 -81778858 + L1MD2 LINE L1 5690 6021 -338 3849 115 52 38 chr10 58537907 58538542 -81778223 - LTR9B LTR ERV1 0 644 1 2912 210 49 39 chr10 58538542 58538622 -81778143 + L1MD2 LINE L1 6021 6099 -260 1817 170 68 34 chr10 58538632 58539074 -81777691 - LTR2B LTR ERV1 0 490 34 1690 100 13 23 chr10 58539091 58539479 -81777286 - LTR7 LTR ERV1 -14 436 1 2449 91 35 13 chr10 58539479 58539876 -81776889 - HERVH LTR ERV1 0 7713 7308 373 91 30 0 chr10 58539877 58539943 -81776822 - LTR49 LTR ERV1 -525 70 3 2345 208 53 55 chr10 58540869 58541546 -81775219 + LTR8 LTR ERV1 16 691 0 22 35 0 0 chr10 58541596 58541625 -81775140 + AT_rich Low_complexity Low_complexity 1 29 0 198 296 0 19 chr10 58541699 58541753 -81775012 + L2 LINE L2 3173 3225 -88 444 271 74 44 chr10 58541815 58542018 -81774747 - MIR SINE MIR -26 236 28 384 182 61 18 chr10 58542297 58542462 -81774303 + (TATAA)n Simple_repeat Simple_repeat 3 174 0 2763 155 34 37 chr10 58543004 58543121 -81773644 - MER34B LTR ERV1 -30 535 419 249 33 0 0 chr10 58543121 58543151 -81773614 + (TA)n Simple_repeat Simple_repeat 2 31 0 2763 155 34 37 chr10 58543151 58543570 -81773195 - MER34B LTR ERV1 -146 419 1 367 127 0 16 chr10 58543615 58543678 -81773087 + MER92C LTR ERV1 1 62 -492 1352 158 63 12 chr10 58543696 58544024 -81772741 + LTR49 LTR ERV1 2 425 -170 702 179 0 0 chr10 58544025 58544159 -81772606 + (TG)n Simple_repeat Simple_repeat 2 135 0 837 114 60 24 chr10 58544162 58544328 -81772437 + LTR49 LTR ERV1 424 595 0 354 205 51 0 chr10 58544329 58544407 -81772358 + MER92B LTR ERV1 62 143 -493 1335 154 59 4 chr10 58544408 58544661 -81772104 + LTR24C LTR ERV1 1 267 -368 753 61 0 0 chr10 58545199 58545297 -81771468 - L1PA8 LINE L1 -3 6169 6072 1885 132 106 6 chr10 58545297 58545646 -81771119 + LTR24C LTR ERV1 252 635 0 1766 181 28 82 chr10 58545646 58546148 -81770617 + MER92B LTR ERV1 141 615 -21 214 28 28 28 chr10 58546151 58546187 -81770578 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1608 147 0 72 chr10 58546189 58546482 -81770283 - AluSg SINE Alu -25 285 14 2029 123 40 40 chr10 58547193 58547568 -81769197 - THE1C LTR MaLR 0 375 1 1107 173 27 108 chr10 58547649 58547854 -81768911 + MER63B DNA MER1_type 1 170 -892 1663 177 127 24 chr10 58547854 58548312 -81768453 - LTR22 LTR ERVK -4 505 1 1107 173 27 108 chr10 58548312 58548441 -81768324 + MER63B DNA MER1_type 170 308 -128 1493 228 92 7 chr10 58548446 58548858 -81767907 + L1ME1 LINE L1 5695 6141 -25 751 250 0 5 chr10 58548874 58549066 -81767699 + L1PB4 LINE L1 5966 6156 0 32 26 0 0 chr10 58549073 58549112 -81767653 + AT_rich Low_complexity Low_complexity 1 39 0 265 187 66 0 chr10 58549119 58549210 -81767555 + (TA)n Simple_repeat Simple_repeat 1 97 0 183 255 43 0 chr10 58549293 58549340 -81767425 + MIR3 SINE MIR 111 159 -49 201 333 158 12 chr10 58549977 58550148 -81766617 - MIR SINE MIR -18 244 49 2452 145 39 2 chr10 58550344 58550757 -81766008 + MSTA LTR MaLR 1 428 0 245 355 120 5 chr10 58552288 58552488 -81764277 + L3b LINE CR1 1292 1514 -69 536 266 0 7 chr10 58552730 58552869 -81763896 + MLT1C LTR MaLR 330 467 0 185 244 35 122 chr10 58553055 58553170 -81763595 - MIR SINE MIR -78 184 80 2236 109 0 13 chr10 58553893 58554204 -81762561 - AluSq SINE Alu -6 307 1 216 191 19 9 chr10 58555565 58555670 -81761095 + (TA)n Simple_repeat Simple_repeat 2 107 0 317 283 104 0 chr10 58556781 58556887 -81759878 + MIR SINE MIR 75 191 -71 2378 87 3 6 chr10 58556890 58557201 -81759564 + AluSx SINE Alu 1 310 -2 1665 200 0 0 chr10 58558489 58558769 -81757996 + AluJo SINE Alu 1 280 -32 229 170 0 0 chr10 58558791 58558844 -81757921 + L1MC4 LINE L1 6651 6703 -1339 240 163 0 0 chr10 58558845 58558888 -81757877 + (TA)n Simple_repeat Simple_repeat 1 43 0 734 179 0 0 chr10 58559777 58559889 -81756876 + FRAM SINE Alu 29 140 -36 224 71 48 0 chr10 58559895 58559937 -81756828 + (TTAAA)n Simple_repeat Simple_repeat 2 45 0 183 225 100 0 chr10 58559940 58559980 -81756785 + MIR3 SINE MIR 120 163 -45 28 86 0 0 chr10 58559987 58560057 -81756708 + AT_rich Low_complexity Low_complexity 1 70 0 335 275 29 22 chr10 58560730 58560868 -81755897 - MLT1H LTR MaLR -292 257 119 1744 174 22 30 chr10 58560910 58561278 -81755487 - MLT1A1 LTR MaLR 0 365 1 231 314 12 0 chr10 58561527 58561613 -81755152 - MLT1A1-int LTR MaLR -262 1109 1023 1331 189 91 0 chr10 58561717 58561982 -81754783 - AluJo SINE Alu -13 289 1 254 255 41 10 chr10 58562633 58562731 -81754034 - MLT1A1-int LTR MaLR -1634 101 1 281 264 169 14 chr10 58562731 58562879 -81753886 - MLT1A1 LTR MaLR 0 549 379 352 273 50 0 chr10 58562989 58563088 -81753677 + MLT1H LTR MaLR 131 234 -315 1119 195 142 56 chr10 58563228 58563658 -81753107 + MLT1D LTR MaLR 24 490 -15 231 220 0 0 chr10 58564025 58564075 -81752690 + L1MEc LINE L1 1958 2007 -4389 26 64 0 0 chr10 58564170 58564217 -81752548 + AT_rich Low_complexity Low_complexity 1 47 0 808 290 17 64 chr10 58564310 58564845 -81751920 + L1MEc LINE L1 1283 1792 -4604 507 33 0 0 chr10 58564845 58564906 -81751859 + (TG)n Simple_repeat Simple_repeat 1 61 0 1482 110 50 0 chr10 58564935 58565154 -81751611 - MER30 DNA MER1_type 0 230 1 5946 87 10 28 chr10 58565161 58566163 -81750602 + L1PA13 LINE L1 5178 6161 -2 608 290 50 81 chr10 58566173 58566632 -81750133 - L1M4 LINE L1 -1260 4886 4442 834 170 95 71 chr10 58566933 58567227 -81749538 + LTR8A LTR ERV1 427 727 0 396 246 0 16 chr10 58567237 58567359 -81749406 + L1M4 LINE L1 3728 3847 -2299 3582 222 46 17 chr10 58567391 58569281 -81747484 + L1ME2 LINE L1 298 2425 -4320 2715 161 18 55 chr10 58569283 58569556 -81747209 + L1MB7 LINE L1 5532 5814 -370 1898 168 0 22 chr10 58569556 58569872 -81746893 + AluSx SINE Alu 1 309 -3 2715 161 18 55 chr10 58569872 58570220 -81746545 + L1MB7 LINE L1 5814 6130 -54 1068 229 57 3 chr10 58570213 58570528 -81746237 + L1ME2 LINE L1 4254 4585 -1979 * 2214 209 54 46 chr10 58570616 58570756 -81746009 + L1ME2 LINE L1 5474 5611 -971 2381 97 0 3 chr10 58570756 58571066 -81745699 + AluSc SINE Alu 1 309 0 2214 209 54 46 chr10 58571066 58571840 -81744925 + L1ME2 LINE L1 5611 6464 -118 297 288 62 38 chr10 58572137 58572304 -81744461 - MIR SINE MIR -63 145 19 1661 174 56 112 chr10 58572598 58573133 -81743632 - MLT1D LTR MaLR 0 505 1 536 215 44 60 chr10 58573650 58573966 -81742799 - L1MC5 LINE L1 -48 7913 7603 10653 77 0 9 chr10 58573985 58576211 -81740554 + L1PA7 LINE L1 3917 6142 -12 302 167 103 13 chr10 58576211 58576281 -81740484 + L1MC4 LINE L1 6613 6692 -1350 360 250 24 48 chr10 58576335 58576459 -81740306 - L1M4 LINE L1 -2816 3330 3210 658 95 103 0 chr10 58576485 58576601 -81740164 - L1MB4 LINE L1 -1 6179 6052 469 302 16 16 chr10 58577981 58578107 -81738658 - L2 LINE L2 -26 3287 3162 22 0 0 0 chr10 58578227 58578249 -81738516 + AT_rich Low_complexity Low_complexity 1 22 0 1683 175 7 3 chr10 58578364 58578661 -81738104 + AluJb SINE Alu 15 312 0 865 158 55 6 chr10 58578669 58578833 -81737932 + AluJb SINE Alu 141 312 0 528 243 22 60 chr10 58579334 58579519 -81737246 - MER5B DNA MER1_type 0 178 1 1327 69 0 0 chr10 58579678 58579852 -81736913 - PABL_A LTR ERV1 0 660 487 336 310 51 0 chr10 58579900 58580058 -81736707 - MER102b DNA MER1_type -1 340 175 2218 84 0 3 chr10 58580118 58580426 -81736339 + AluSq SINE Alu 1 307 0 2505 202 18 21 chr10 58581113 58581678 -81735087 + MER99 DNA DNA 216 778 -50 23 0 0 0 chr10 58581678 58581701 -81735064 + AT_rich Low_complexity Low_complexity 1 23 0 346 273 23 0 chr10 58581701 58581789 -81734976 + L1MC4 LINE L1 6614 6703 -1339 294 179 0 0 chr10 58581789 58581845 -81734920 + (CA)n Simple_repeat Simple_repeat 2 57 0 2857 113 9 25 chr10 58582215 58582656 -81734109 + MER57B LTR ERV1 1 434 0 193 218 91 36 chr10 58582699 58582754 -81734011 + L2 LINE L2 3210 3267 -5 3232 137 15 68 chr10 58583189 58583840 -81732925 - LTR8 LTR ERV1 -72 619 3 223 143 0 54 chr10 58583858 58583914 -81732851 + (TTCTC)n Simple_repeat Simple_repeat 5 57 0 1765 159 19 41 chr10 58583945 58584434 -81732331 + L1PA16 LINE L1 5811 6287 -10 210 71 0 0 chr10 58584523 58584551 -81732214 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 234 0 0 0 chr10 58584550 58584576 -81732189 + (GA)n Simple_repeat Simple_repeat 2 27 0 306 0 0 0 chr10 58584607 58584641 -81732124 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2172 113 0 0 chr10 58584644 58584935 -81731830 - AluSx SINE Alu -21 291 1 761 116 8 0 chr10 58586250 58586371 -81730394 + L1MA5A LINE L1 6166 6287 -10 351 315 60 11 chr10 58586481 58586665 -81730100 + MIR SINE MIR 70 262 0 393 286 92 61 chr10 58586829 58586880 -81729885 - MIR SINE MIR -13 249 201 2247 130 14 25 chr10 58586880 58587248 -81729517 - THE1B LTR MaLR 0 364 1 393 286 92 61 chr10 58587248 58587392 -81729373 - MIR SINE MIR -61 201 48 939 103 7 44 chr10 58587427 58587563 -81729202 + FRAM SINE Alu 16 146 -30 2596 181 42 9 chr10 58587663 58588217 -81728548 + LTR49 LTR ERV1 1 572 -23 1956 192 30 127 chr10 58588568 58588962 -81727803 + LTR8 LTR ERV1 1 289 -402 863 137 0 0 chr10 58588962 58589079 -81727686 - FLAM_C SINE Alu -15 118 2 1956 192 30 127 chr10 58589079 58589439 -81727326 + LTR8 LTR ERV1 289 682 -9 581 195 126 38 chr10 58589854 58590013 -81726752 + MLT1B LTR MaLR 1 173 -217 411 119 0 0 chr10 58590032 58590099 -81726666 + (TC)n Simple_repeat Simple_repeat 2 68 0 754 258 25 10 chr10 58590120 58590318 -81726447 + MLT1B LTR MaLR 190 390 0 508 275 110 30 chr10 58591278 58591478 -81725287 + MIR SINE MIR 47 262 0 374 321 54 54 chr10 58591658 58591842 -81724923 - MIR SINE MIR -61 201 18 423 263 17 91 chr10 58592477 58592652 -81724113 + MER5B DNA MER1_type 1 162 -16 2858 3 0 0 chr10 58593072 58593381 -81723384 - AluYa5 SINE Alu -2 309 1 2320 48 37 7 chr10 58593601 58593896 -81722869 + AluY SINE Alu 1 304 -7 331 188 188 113 chr10 58593952 58594112 -81722653 + MER5B DNA MER1_type 1 172 -6 356 233 108 63 chr10 58594347 58594570 -81722195 - Charlie8 DNA MER1_type -1870 547 315 324 107 36 0 chr10 58596216 58596272 -81720493 - L1MB5 LINE L1 0 6174 6117 202 186 71 86 chr10 58597265 58597335 -81719430 - MER5B DNA MER1_type -11 167 99 411 21 0 0 chr10 58599716 58599764 -81717001 + (TG)n Simple_repeat Simple_repeat 2 49 0 2121 141 0 0 chr10 58599811 58600116 -81716649 - AluSx SINE Alu -7 305 1 275 221 52 0 chr10 58600134 58600211 -81716554 - MIR SINE MIR -11 251 171 419 360 40 13 chr10 58600268 58600496 -81716269 - MIR SINE MIR -3 259 26 6780 74 1 1 chr10 58600547 58601779 -81714986 + L1PA6 LINE L1 4923 6154 0 256 339 8 0 chr10 58602053 58602174 -81714591 + L1MC5 LINE L1 7324 7445 -516 249 248 19 105 chr10 58602178 58602283 -81714482 - MIR SINE MIR -161 101 6 216 97 0 0 chr10 58602346 58602377 -81714388 + (TA)n Simple_repeat Simple_repeat 1 31 0 309 290 59 65 chr10 58602902 58603071 -81713694 + MER5B DNA MER1_type 4 171 -7 1673 194 57 20 chr10 58603590 58603940 -81712825 + MLT1A1 LTR MaLR 1 363 -2 21 57 0 0 chr10 58606700 58606735 -81710030 + AT_rich Low_complexity Low_complexity 1 35 0 536 284 45 26 chr10 58606763 58606918 -81709847 - MIR3 SINE MIR -49 159 2 220 94 0 0 chr10 58606948 58606980 -81709785 - MIR SINE MIR -5 257 226 560 236 56 28 chr10 58606997 58607175 -81709590 + LTR41 LTR ERVL 1 183 -590 423 259 148 86 chr10 58607468 58607711 -81709054 + LTR41 LTR ERVL 510 767 -6 2024 62 4 16 chr10 58608573 58608830 -81707935 + AluY SINE Alu 2 255 -56 2179 109 0 0 chr10 58609187 58609510 -81707255 - AluSx SINE Alu 0 323 1 595 304 94 19 chr10 58609729 58609995 -81706770 - L2 LINE L2 -2 3270 2985 189 336 45 60 chr10 58610193 58610327 -81706438 + MIR SINE MIR 37 168 -94 372 273 133 0 chr10 58610550 58610595 -81706170 - MIR SINE MIR -59 203 165 195 100 0 0 chr10 58610595 58610625 -81706140 + (TTA)n Simple_repeat Simple_repeat 3 32 0 372 273 133 0 chr10 58610625 58610707 -81706058 - MIR SINE MIR -97 165 59 1905 145 26 20 chr10 58611372 58611723 -81705042 + MER39B LTR ERV1 301 653 0 419 310 43 50 chr10 58611880 58611991 -81704774 + MARNA DNA Mariner 287 397 -189 1556 189 7 11 chr10 58611991 58612307 -81704458 - AluJo SINE Alu 0 315 1 419 310 43 50 chr10 58612307 58612475 -81704290 + MARNA DNA Mariner 397 565 -21 2049 69 0 11 chr10 58612555 58612831 -81703934 + L1PA8 LINE L1 5894 6166 -6 497 239 90 19 chr10 58612952 58613107 -81703658 - MLT1K LTR MaLR -1 587 422 237 230 0 0 chr10 58613107 58613181 -81703584 + (TG)n Simple_repeat Simple_repeat 2 75 0 983 276 91 33 chr10 58613193 58613523 -81703242 - MLT1K LTR MaLR -184 404 56 1066 275 110 16 chr10 58613572 58614008 -81702757 - MLT1J LTR MaLR -34 477 1 1636 191 24 3 chr10 58614925 58615219 -81701546 - AluJo SINE Alu -12 300 1 981 50 0 0 chr10 58615377 58615498 -81701267 + L1PA6 LINE L1 6024 6144 -10 327 35 0 351 chr10 58615510 58615624 -81701141 + MADE1 DNA Mariner 1 74 -6 375 313 32 40 chr10 58615652 58616026 -81700739 + L1M4 LINE L1 2680 3050 -3096 261 215 38 25 chr10 58616112 58616191 -81700574 + L1ME LINE L1 5366 5445 -717 812 275 78 48 chr10 58616216 58616511 -81700254 - MLT1J LTR MaLR -205 306 3 1575 218 11 84 chr10 58618069 58618320 -81698445 + MLT1C LTR MaLR 25 226 -241 2388 94 41 8 chr10 58618320 58618683 -81698082 - THE1C LTR MaLR 0 375 1 1575 218 11 84 chr10 58618683 58618909 -81697856 + MLT1C LTR MaLR 226 467 0 867 248 62 12 chr10 58619731 58619973 -81696792 + MIR SINE MIR 6 259 -3 1260 180 83 80 chr10 58620376 58620737 -81696028 + MLT1A2 LTR MaLR 13 374 0 237 65 0 0 chr10 58621042 58621073 -81695692 + (TCC)n Simple_repeat Simple_repeat 1 31 0 697 253 119 16 chr10 58621336 58621530 -81695235 - MIR SINE MIR 0 262 49 520 194 0 28 chr10 58621810 58621918 -81694847 + MLT1B LTR MaLR 281 385 -5 24 91 0 0 chr10 58622055 58622121 -81694644 + AT_rich Low_complexity Low_complexity 1 66 0 332 164 90 139 chr10 58623316 58623438 -81693327 + MIR SINE MIR 79 194 -68 1423 196 31 8 chr10 58623927 58624187 -81692578 - AluJo SINE Alu -46 266 1 2142 187 19 94 chr10 58624280 58624809 -81691956 - MER82 DNA MER2_type -1 652 164 880 221 46 86 chr10 58624816 58625141 -81691624 - MER21A LTR ERV1 -140 791 480 611 151 36 7 chr10 58625339 58625478 -81691287 + CT-rich Low_complexity Low_complexity 1 143 0 1485 272 92 56 chr10 58625478 58626380 -81690385 - L2 LINE L2 -1 3312 2399 305 278 68 43 chr10 58627042 58627204 -81689561 - L1ME1 LINE L1 -7 6159 5994 1084 212 115 44 chr10 58627394 58627715 -81689050 + MER2 DNA MER2_type 1 344 0 261 0 0 0 chr10 58627749 58627778 -81688987 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 323 242 193 0 chr10 58627881 58627975 -81688790 + MIR SINE MIR 45 155 -65 2240 245 56 53 chr10 58628961 58630087 -81686678 + L1ME1 LINE L1 5057 6332 -2 1187 231 33 40 chr10 58630082 58630236 -81686529 - L1M4 LINE L1 -1286 4860 4706 * 2155 125 0 0 chr10 58630236 58630532 -81686233 - AluSx SINE Alu -16 296 1 1187 231 33 40 chr10 58630532 58630775 -81685990 - L1M4 LINE L1 -1440 4706 4466 369 260 39 16 chr10 58630779 58630906 -81685859 + MER20B DNA MER1_type 650 779 -4 2295 278 136 70 chr10 58630927 58631476 -81685289 - L2 LINE L2 -1159 2155 1643 1627 181 3 20 chr10 58631476 58631768 -81684997 - AluJb SINE Alu -25 287 1 2295 278 136 70 chr10 58631768 58632192 -81684573 - L2 LINE L2 -1671 1643 1248 1228 133 58 25 chr10 58632192 58632433 -81684332 - L1PA16 LINE L1 -9 6157 5909 2295 278 136 70 chr10 58632433 58633103 -81683662 - L2 LINE L2 -2066 1248 404 335 280 51 51 chr10 58634460 58634635 -81682130 + MLT1H LTR MaLR 210 384 -165 193 167 0 28 chr10 58635566 58635602 -81681163 + MER5C DNA MER1_type 4 38 -286 22 35 0 0 chr10 58635656 58635685 -81681080 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr10 58636141 58636168 -81680597 + (A)n Simple_repeat Simple_repeat 1 27 0 200 316 105 0 chr10 58636395 58636471 -81680294 + L2 LINE L2 3189 3272 0 249 340 43 0 chr10 58637616 58637710 -81679055 + L2 LINE L2 3211 3308 -5 33 66 0 0 chr10 58638521 58638582 -81678183 + AT_rich Low_complexity Low_complexity 1 61 0 2329 57 3 0 chr10 58642015 58642357 -81674408 + AluY SINE Alu 1 343 0 2533 68 0 0 chr10 58642365 58642676 -81674089 + AluY SINE Alu 1 311 0 2161 108 20 3 chr10 58642747 58643053 -81673712 + AluSx SINE Alu 1 311 -1 647 264 50 66 chr10 58644329 58644769 -81671996 + L1MB8 LINE L1 3764 4196 -1950 1985 135 0 0 chr10 58645133 58645415 -81671350 - AluSx SINE Alu -30 282 1 26 0 0 0 chr10 58645456 58645482 -81671283 + AT_rich Low_complexity Low_complexity 1 26 0 849 111 0 0 chr10 58645827 58645962 -81670803 - L1MA4A LINE L1 -6 6297 6163 11169 104 32 61 chr10 58646207 58647389 -81669376 + Tigger1 DNA MER2_type 1 1216 -1202 1624 133 25 63 chr10 58647389 58647674 -81669091 + AluJo SINE Alu 29 302 -10 11169 104 32 61 chr10 58647674 58648330 -81668435 + Tigger1 DNA MER2_type 1216 1792 -626 2030 121 7 3 chr10 58648330 58648612 -81668153 - AluJb SINE Alu -29 283 1 11169 104 32 61 chr10 58648612 58649076 -81667689 + Tigger1 DNA MER2_type 1792 2268 -150 802 223 7 0 chr10 58649078 58649226 -81667539 + AluJo SINE Alu 3 151 -161 2256 165 127 25 chr10 58649411 58649508 -81667257 + L1MB8 LINE L1 4615 4701 -1479 1799 173 0 17 chr10 58649508 58649828 -81666937 + AluJo SINE Alu 1 312 0 2256 165 127 25 chr10 58649828 58650585 -81666180 + L1MB8 LINE L1 4701 5566 -614 1303 153 16 32 chr10 58650585 58650831 -81665934 + L1PB3 LINE L1 5906 6149 -5 2568 183 27 25 chr10 58650856 58651484 -81665281 + L1MB8 LINE L1 5550 6178 0 3796 114 53 24 chr10 58651633 58651999 -81664766 - L1PB2 LINE L1 -3 6148 5753 2123 93 0 7 chr10 58651999 58652279 -81664486 - AluY SINE Alu -13 298 21 3796 114 53 24 chr10 58652279 58652551 -81664214 - L1PB2 LINE L1 -398 5753 5491 967 173 25 5 chr10 58652551 58652753 -81664012 - L1 LINE L1 -3516 2630 2425 * 1233 96 83 9 chr10 58652738 58652941 -81663824 - L1PBa LINE L1 -4545 2318 2097 2419 68 0 0 chr10 58652941 58653236 -81663529 - AluY SINE Alu -16 295 1 1233 96 83 9 chr10 58653236 58653250 -81663515 - L1PBa LINE L1 -4766 2097 2085 * 7929 176 30 7 chr10 58653248 58655979 -81660786 - L1PBa LINE L1 -5009 1854 1 2244 119 0 3 chr10 58656187 58656489 -81660276 - AluSx SINE Alu -11 301 1 1256 103 68 188 chr10 58656571 58656922 -81659843 + AluJb SINE Alu 1 309 -3 1207 341 96 35 chr10 58658151 58658399 -81658366 - L2 LINE L2 -958 2356 2124 2354 80 3 10 chr10 58658399 58658712 -81658053 + AluY SINE Alu 1 311 0 1207 341 96 35 chr10 58658712 58659454 -81657311 - L2 LINE L2 -1190 2124 1306 693 277 41 84 chr10 58659856 58660343 -81656422 + MLT1H LTR MaLR 19 484 -65 1960 150 3 7 chr10 58660412 58660706 -81656059 - AluJb SINE Alu -19 293 1 181 261 36 81 chr10 58660888 58660999 -81655766 - L2 LINE L2 0 3313 3208 25 51 0 0 chr10 58661677 58661716 -81655049 + AT_rich Low_complexity Low_complexity 1 39 0 1846 168 10 0 chr10 58661853 58662145 -81654620 - AluSx SINE Alu -17 295 1 198 0 0 0 chr10 58662153 58662175 -81654590 + (T)n Simple_repeat Simple_repeat 1 22 0 2440 78 3 0 chr10 58662403 58662709 -81654056 + AluSp SINE Alu 1 307 -6 390 301 128 5 chr10 58664634 58664853 -81651912 - MER112 DNA MER1_type -3 257 12 209 216 20 0 chr10 58665184 58665235 -81651530 + GA-rich Low_complexity Low_complexity 1 52 0 517 277 130 5 chr10 58665472 58665656 -81651109 + MIR SINE MIR 51 257 -5 204 174 65 0 chr10 58665716 58665762 -81651003 - L2 LINE L2 -64 3249 3201 378 279 43 14 chr10 58666224 58666364 -81650401 + L2 LINE L2 1225 1368 -1946 1735 171 3 51 chr10 58666552 58666733 -81650032 - AluJo SINE Alu -9 303 142 2347 115 0 0 chr10 58666733 58667045 -81649720 - AluSx SINE Alu 0 312 1 1735 171 3 51 chr10 58667045 58667179 -81649586 - AluJo SINE Alu -170 142 3 187 400 17 0 chr10 58667193 58667253 -81649512 + L3b LINE CR1 1479 1539 -44 2154 66 0 14 chr10 58667867 58668156 -81648609 + L1PB1 LINE L1 5866 6150 -1 1877 138 63 30 chr10 58668664 58669027 -81647738 + THE1C LTR MaLR 1 375 0 715 160 0 0 chr10 58669455 58669580 -81647185 + L1MB7 LINE L1 6052 6176 -8 207 171 0 0 chr10 58670992 58671027 -81645738 + GA-rich Low_complexity Low_complexity 3 37 0 427 343 11 11 chr10 58671258 58671433 -81645332 + MER5A DNA MER1_type 6 180 -9 1428 220 22 12 chr10 58672284 58672693 -81644072 + LTR37A LTR ERV1 14 426 0 303 252 150 54 chr10 58673210 58673357 -81643408 + L1MC4a LINE L1 5816 5976 -1832 430 192 13 80 chr10 58673472 58673518 -81643247 + L1MEd LINE L1 2 49 -6070 2083 93 0 0 chr10 58673518 58673786 -81642979 - AluY SINE Alu 0 311 44 430 192 13 80 chr10 58673786 58673890 -81642875 + L1MEd LINE L1 49 142 -5977 362 287 30 49 chr10 58673970 58674134 -81642631 + HAL1 LINE L1 469 629 -1878 2213 104 0 23 chr10 58674270 58674577 -81642188 + AluSx SINE Alu 1 300 -12 201 178 0 22 chr10 58674673 58674718 -81642047 + GA-rich Low_complexity Low_complexity 3 46 0 35698 83 15 7 chr10 58674718 58680823 -81635942 + L1PA6 LINE L1 1 6154 0 1873 164 0 10 chr10 58680929 58681222 -81635543 - AluSx SINE Alu -17 295 6 466 270 78 32 chr10 58681247 58681592 -81635173 + L1M4 LINE L1 3588 3948 -2198 1060 138 5 51 chr10 58681619 58681814 -81634951 + AluJb SINE Alu 1 186 -126 1483 167 4 34 chr10 58681822 58682085 -81634680 + AluJb SINE Alu 41 295 -17 274 179 194 0 chr10 58682124 58682191 -81634574 + LTR33 LTR ERVL 40 119 -402 277 281 287 0 chr10 58682300 58682467 -81634298 + LTR33 LTR ERVL 307 521 0 434 279 57 13 chr10 58682533 58682691 -81634074 - MER112 DNA MER1_type -94 166 2 230 329 100 0 chr10 58683302 58683372 -81633393 + MER91A DNA MER1_type 7 83 -113 489 231 0 0 chr10 58683653 58683757 -81633008 - U13 snRNA snRNA 0 104 1 1528 170 61 22 chr10 58683874 58684151 -81632614 + AluJo SINE Alu 1 288 -24 243 308 47 35 chr10 58685032 58685457 -81631308 + L1MEd LINE L1 709 1138 -4981 698 281 138 21 chr10 58685498 58686011 -81630754 + L1MCc LINE L1 25 597 -5826 1733 258 52 35 chr10 58686114 58686522 -81630243 + L1MCc LINE L1 743 1143 -5519 1439 216 38 30 chr10 58686522 58686893 -81629872 - MLT1A2 LTR MaLR 0 374 1 1733 258 52 35 chr10 58686893 58687231 -81629534 + L1MCc LINE L1 1143 1507 -5155 1923 86 0 12 chr10 58687231 58687486 -81629279 + AluY SINE Alu 60 311 0 1733 258 52 35 chr10 58687486 58687729 -81629036 + L1MCc LINE L1 1507 1744 -4918 1890 138 165 5 chr10 58687754 58688123 -81628642 + MSTA LTR MaLR 1 428 0 574 229 17 0 chr10 58688123 58688272 -81628493 + L1MB2 LINE L1 5646 5808 -313 204 167 37 37 chr10 58688278 58688332 -81628433 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 7353 78 6 205 chr10 58688366 58690055 -81626710 + SVA Other Other 34 1386 0 33 25 0 0 chr10 58690055 58690095 -81626670 + AT_rich Low_complexity Low_complexity 1 40 0 948 178 70 13 chr10 58690096 58690326 -81626439 + L1MB2 LINE L1 5814 6056 -115 1955 151 0 0 chr10 58690340 58690631 -81626134 + AluSg SINE Alu 13 303 -7 11727 32 0 1 chr10 58690639 58692816 -81623949 + L1PA3 LINE L1 3979 6155 0 278 265 154 0 chr10 58693034 58693170 -81623595 - L1ME4a LINE L1 -4 6117 5961 24 85 0 0 chr10 58693170 58693229 -81623536 + AT_rich Low_complexity Low_complexity 1 59 0 422 170 132 0 chr10 58693229 58693335 -81623430 + L1MB2 LINE L1 6050 6169 -2 4312 141 40 5 chr10 58693414 58694197 -81622568 - L1MA4 LINE L1 -7 7712 6903 807 207 13 0 chr10 58694230 58694380 -81622385 - FRAM SINE Alu -25 151 1 6742 170 55 13 chr10 58694385 58695409 -81621356 - L1MA4 LINE L1 -743 6822 5787 183 42 0 0 chr10 58695409 58695433 -81621332 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6742 170 55 13 chr10 58695433 58696006 -81620759 - L1MA4 LINE L1 -1778 5787 5240 3702 223 47 39 chr10 58696027 58697437 -81619328 - L1MA4 LINE L1 -3027 4538 3141 731 186 0 13 chr10 58697437 58697593 -81619172 - L1PA15 LINE L1 0 6165 6012 2152 136 3 0 chr10 58697598 58697908 -81618857 - AluSx SINE Alu -1 311 1 3702 223 47 39 chr10 58697908 58697995 -81618770 - L1MA4 LINE L1 -4427 3138 3053 2230 135 49 0 chr10 58697995 58698342 -81618423 + THE1B LTR MaLR 1 364 0 3702 223 47 39 chr10 58698342 58698443 -81618322 - L1MA4 LINE L1 -4512 3053 2954 1966 126 16 31 chr10 58698443 58698760 -81618005 + AluSx SINE Alu 1 312 0 3702 223 47 39 chr10 58698760 58699709 -81617056 - L1MA4 LINE L1 -4611 2954 2262 609 341 46 26 chr10 58700166 58700623 -81616142 - L1MA4 LINE L1 -5813 1683 1218 1530 204 12 35 chr10 58700700 58700755 -81616010 + AluJb SINE Alu 1 56 -256 5269 158 30 31 chr10 58700755 58701825 -81614940 + MER11C LTR ERVK 1 1069 -2 1530 204 12 35 chr10 58701825 58702088 -81614677 + AluJb SINE Alu 56 312 0 2214 129 0 0 chr10 58702209 58702520 -81614245 + AluSx SINE Alu 1 311 -1 232 313 9 0 chr10 58702549 58702661 -81614104 + L1MC4a LINE L1 1289 1401 -4983 1786 223 93 55 chr10 58702688 58703025 -81613740 + L1MC4a LINE L1 2491 2814 -3568 2270 97 3 3 chr10 58703025 58703324 -81613441 + AluSg SINE Alu 1 299 -11 1786 223 93 55 chr10 58703324 58703907 -81612858 + L1MC4a LINE L1 2814 3446 -2936 2690 235 162 18 chr10 58703946 58704457 -81612308 + L1MC4 LINE L1 6468 6904 -1138 297 0 0 0 chr10 58704457 58704490 -81612275 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2690 235 162 18 chr10 58704490 58704547 -81612218 + L1MC4 LINE L1 6904 6951 -1091 1796 174 0 22 chr10 58704547 58704858 -81611907 + AluJb SINE Alu 1 304 -8 2690 235 162 18 chr10 58704858 58705385 -81611380 + L1MC4 LINE L1 6951 7722 -320 692 247 36 18 chr10 58705389 58705664 -81611101 + L1MC4 LINE L1 7762 8041 -1 * 836 230 82 6 chr10 58705656 58705973 -81610792 + L1MC4a LINE L1 4594 4934 -1448 2745 265 98 51 chr10 58706108 58706578 -81610187 + L1MC4a LINE L1 6048 6495 -1549 1913 103 71 0 chr10 58706578 58706859 -81609906 - AluSg SINE Alu -9 301 1 2745 265 98 51 chr10 58706859 58706918 -81609847 + L1MC4a LINE L1 6495 6550 -1494 2566 66 0 3 chr10 58706918 58707252 -81609513 + L1PA6 LINE L1 5822 6154 0 2745 265 98 51 chr10 58707252 58708099 -81608666 + L1MC4a LINE L1 6550 7533 -511 1881 158 3 10 chr10 58708099 58708234 -81608531 + AluJo SINE Alu 1 135 -177 2147 111 7 10 chr10 58708234 58708531 -81608234 + AluSx SINE Alu 1 296 -16 1881 158 3 10 chr10 58708531 58708698 -81608067 + AluJo SINE Alu 135 301 -11 2745 265 98 51 chr10 58708698 58709136 -81607629 + L1MC4a LINE L1 7533 7949 -95 572 207 59 0 chr10 58709136 58709271 -81607494 + L1MC4 LINE L1 8044 8186 -92 232 156 0 0 chr10 58709273 58709318 -81607447 + L1MC4 LINE L1 8225 8269 -9 226 294 8 25 chr10 58709634 58709753 -81607012 + L1ME LINE L1 5683 5799 -322 220 339 158 0 chr10 58711144 58711271 -81605494 - L2 LINE L2 -1 3271 3125 310 287 78 96 chr10 58712828 58713173 -81603592 + L1M2 LINE L1 524 862 -5987 738 200 0 52 chr10 58715871 58716026 -81600739 - FRAM SINE Alu -24 152 6 2664 10 0 3 chr10 58716039 58716335 -81600430 - AluYa5 SINE Alu -16 295 1 2260 95 0 7 chr10 58717632 58717928 -81598837 + AluSg SINE Alu 1 294 -16 304 216 216 0 chr10 58717929 58718031 -81598734 + L1MC5 LINE L1 7785 7908 -53 207 0 0 0 chr10 58718084 58718107 -81598658 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2439 91 3 0 chr10 58718847 58719154 -81597611 + AluSx SINE Alu 1 308 -4 234 0 0 0 chr10 58719436 58719462 -81597303 + (T)n Simple_repeat Simple_repeat 1 26 0 42 36 0 0 chr10 58721315 58721371 -81595394 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr10 58721627 58721648 -81595117 + AT_rich Low_complexity Low_complexity 1 21 0 1055 118 13 0 chr10 58722418 58722571 -81594194 - AluSg/x SINE Alu -15 295 141 1473 151 46 49 chr10 58723251 58723567 -81593198 + AluJb SINE Alu 1 315 0 1030 157 0 40 chr10 58723708 58723906 -81592859 + Tigger4(Zombi) DNA MER2_type 1 190 -2541 2631 146 5 2 chr10 58723907 58724352 -81592413 + Tigger4(Zombi) DNA MER2_type 2257 2702 -29 773 154 0 0 chr10 58724845 58724962 -81591803 + AluJb SINE Alu 1 117 -195 213 368 157 19 chr10 58725264 58725805 -81590960 - L2 LINE L2 -703 2611 1996 2165 133 7 0 chr10 58726955 58727257 -81589508 - AluSx SINE Alu -8 304 1 1849 129 44 32 chr10 58727281 58727621 -81589144 + MER2 DNA MER2_type 1 344 0 897 219 0 7 chr10 58729089 58729295 -81587470 + AluJb SINE Alu 2 246 -66 2700 45 0 0 chr10 58730919 58731230 -81585535 + AluY SINE Alu 1 311 0 1899 114 111 0 chr10 58731936 58732216 -81584549 - AluSq SINE Alu -2 311 1 183 258 227 10 chr10 58735158 58735255 -81581510 + MIR3 SINE MIR 77 194 -14 336 318 0 0 chr10 58737009 58737094 -81579671 + L2 LINE L2 3188 3272 0 199 347 67 0 chr10 58737544 58737619 -81579146 + MIR SINE MIR 25 104 -158 1316 180 99 42 chr10 58737624 58738029 -81578736 + MLT2C2 LTR ERVL 3 430 -34 1014 159 20 108 chr10 58738346 58738642 -81578123 - LTR23 LTR ERV1 -7 430 161 703 148 27 47 chr10 58738715 58738765 -81578000 - LTR23 LTR ERV1 -286 151 102 2032 129 32 30 chr10 58738765 58739137 -81577628 - THE1C LTR MaLR -2 373 1 703 148 27 47 chr10 58739137 58739235 -81577530 - LTR23 LTR ERV1 -335 102 6 260 215 291 13 chr10 58739239 58739318 -81577447 - L2 LINE L2 -21 3251 3151 3746 160 94 54 chr10 58739782 58740014 -81576751 + MER4D LTR ERV1 1 222 -650 1822 115 82 4 chr10 58740014 58740283 -81576482 + AluSx SINE Alu 1 290 -22 3746 160 94 54 chr10 58740283 58740888 -81575877 + MER4D LTR ERV1 222 872 0 2116 118 0 29 chr10 58741034 58741347 -81575418 + AluSx SINE Alu 1 304 -8 961 43 0 17 chr10 58741529 58741645 -81575120 + AluY SINE Alu 21 134 -177 9611 30 0 0 chr10 58741645 58742843 -81573922 - L1PA3 LINE L1 -1105 5041 3844 7602 29 5 0 chr10 58742844 58743962 -81572803 + L1PA3 LINE L1 5031 6152 -3 29 0 0 0 chr10 58743962 58743991 -81572774 + AT_rich Low_complexity Low_complexity 1 29 0 1469 36 0 0 chr10 58743991 58744159 -81572606 + AluY SINE Alu 128 295 -16 2091 104 38 0 chr10 58745377 58745665 -81571100 - AluSx SINE Alu -13 299 1 330 297 102 16 chr10 58746092 58746220 -81570545 - MIR SINE MIR -50 212 74 549 293 33 33 chr10 58747388 58747603 -81569162 + MIR SINE MIR 48 262 0 21 0 0 0 chr10 58748404 58748425 -81568340 + AT_rich Low_complexity Low_complexity 1 21 0 1294 182 9 9 chr10 58748887 58749172 -81567593 - AluJb SINE Alu 0 366 82 311 290 65 11 chr10 58749393 58749486 -81567279 - L2 LINE L2 -25 3247 3150 297 239 114 0 chr10 58749695 58749783 -81566982 + Charlie8 DNA MER1_type 85 182 -2235 279 196 47 28 chr10 58749832 58749939 -81566826 - MER113 DNA MER1_type? -378 143 35 341 274 104 33 chr10 58750095 58750336 -81566429 - L1M4 LINE L1 -3742 2404 2147 243 0 0 0 chr10 58750525 58750552 -81566213 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1839 127 8 8 chr10 58750563 58750831 -81565934 - AluSx SINE Alu -44 268 1 991 229 280 47 chr10 58750942 58751388 -81565377 - L2 LINE L2 -337 2977 2428 411 286 105 68 chr10 58751520 58751929 -81564836 + L1M4 LINE L1 4799 5222 -924 420 348 78 41 chr10 58752040 58752359 -81564406 + HAL1 LINE L1 261 591 -1916 258 268 0 21 chr10 58752479 58752576 -81564189 + HAL1 LINE L1 818 912 -1595 26 0 0 0 chr10 58752676 58752702 -81564063 + AT_rich Low_complexity Low_complexity 1 26 0 762 172 0 16 chr10 58752789 58752917 -81563848 + FLAM_A SINE Alu 1 126 -7 473 329 47 5 chr10 58753245 58753667 -81563098 + L1ME LINE L1 4407 4846 -1300 493 263 17 104 chr10 58753679 58753808 -81562957 + L1ME LINE L1 4922 5012 -1134 2005 161 0 3 chr10 58753808 58754112 -81562653 + AluSx SINE Alu 1 303 -9 493 263 17 104 chr10 58754112 58754279 -81562486 + L1ME LINE L1 5012 5192 -954 616 251 154 59 chr10 58754283 58754461 -81562304 + L1ME LINE L1 5264 5424 -740 2339 131 81 0 chr10 58754461 58754857 -81561908 + MSTA LTR MaLR 1 428 0 616 251 154 59 chr10 58754857 58755185 -81561580 + L1ME LINE L1 5424 5818 -346 2857 97 16 11 chr10 58755202 58755647 -81561118 + L1MA2 LINE L1 5858 6304 0 394 312 0 18 chr10 58756626 58756735 -81560030 - MIR SINE MIR -137 125 19 2049 135 0 3 chr10 58756735 58757066 -81559699 + AluSx SINE Alu 1 330 0 1568 195 114 108 chr10 58757144 58757232 -81559533 - MLT1E LTR MaLR 0 593 507 2626 135 11 28 chr10 58757232 58757690 -81559075 - L1PA16 LINE L1 -1 6165 5716 1568 195 114 108 chr10 58757690 58757992 -81558773 - MLT1E LTR MaLR -86 507 196 1827 104 13 30 chr10 58757992 58758291 -81558474 + L1MA2 LINE L1 6005 6298 -6 1568 195 114 108 chr10 58758291 58758489 -81558276 - MLT1E LTR MaLR -397 196 1 212 347 133 27 chr10 58758746 58758896 -81557869 + L2 LINE L2 3102 3267 -5 335 330 34 8 chr10 58758982 58759100 -81557665 + L3 LINE CR1 1281 1401 -176 182 297 54 27 chr10 58759161 58759235 -81557530 + L3 LINE CR1 1501 1576 -1 553 278 54 42 chr10 58760384 58760719 -81556046 + L1MC4a LINE L1 5568 5906 -1902 333 226 131 65 chr10 58761365 58761533 -81555232 + MIR SINE MIR 21 199 -63 366 269 54 58 chr10 58761724 58762018 -81554747 - MER97c DNA MER1_type? -28 1062 770 846 239 78 15 chr10 58762815 58763083 -81553682 - MER97a DNA MER1_type? -384 510 226 606 132 0 18 chr10 58763083 58763197 -81553568 + L1MB8 LINE L1 6043 6154 -24 410 259 218 15 chr10 58763204 58763401 -81553364 - MER97a DNA MER1_type? -657 237 1 237 230 16 16 chr10 58763612 58763688 -81553077 + CT-rich Low_complexity Low_complexity 1 76 0 2272 90 3 23 chr10 58764232 58764542 -81552223 - AluSg SINE Alu -6 304 1 677 135 0 0 chr10 58764600 58764704 -81552061 - L1PA10 LINE L1 0 6168 6065 372 43 0 0 chr10 58764989 58765035 -81551730 + (TG)n Simple_repeat Simple_repeat 2 47 0 303 300 30 10 chr10 58765117 58765217 -81551548 + MIR SINE MIR 69 170 -92 2452 147 52 2 chr10 58765255 58765663 -81551102 - MSTC LTR MaLR 0 428 1 1835 232 45 54 chr10 58765717 58766268 -81550497 + MLT2B3 LTR ERVL 1 546 -8 216 266 0 0 chr10 58766268 58766332 -81550433 + MIR SINE MIR 147 210 -52 268 290 0 6 chr10 58766461 58766593 -81550172 - MLT1F LTR MaLR -67 528 309 2508 190 26 66 chr10 58766630 58767221 -81549544 - L1ME1 LINE L1 0 6166 5608 748 192 0 8 chr10 58767221 58767351 -81549414 - FLAM_A SINE Alu -4 129 1 2508 190 26 66 chr10 58767351 58767485 -81549280 - L1ME1 LINE L1 -558 5608 5470 1997 148 14 11 chr10 58767492 58767858 -81548907 - L1MB2 LINE L1 0 6171 5805 2181 104 7 0 chr10 58768462 58768761 -81548004 + AluY SINE Alu 2 302 -9 1839 138 18 64 chr10 58768962 58769005 -81547760 - AluSx SINE Alu 0 312 269 198 0 0 0 chr10 58769005 58769027 -81547738 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1839 138 18 64 chr10 58769027 58769310 -81547455 - AluSx SINE Alu -43 269 1 32 0 0 0 chr10 58769563 58769595 -81547170 + AT_rich Low_complexity Low_complexity 1 32 0 1825 143 7 36 chr10 58769598 58769963 -81546802 - AluSx SINE Alu 0 376 21 1502 173 20 70 chr10 58772582 58772903 -81543862 - L1MB7 LINE L1 -7 6177 5874 343 196 262 28 chr10 58772903 58773010 -81543755 - FLAM_A SINE Alu -1 132 1 1502 173 20 70 chr10 58773010 58773046 -81543719 - L1MB7 LINE L1 -310 5874 5838 3398 112 10 0 chr10 58773046 58773537 -81543228 - MER1A DNA MER1_type 0 529 34 3077 167 25 0 chr10 58773542 58774183 -81542582 - L1MB7 LINE L1 -326 5852 5197 241 107 18 36 chr10 58774188 58774244 -81542521 + (TTCCC)n Simple_repeat Simple_repeat 3 57 0 1653 170 3 28 chr10 58774250 58774532 -81542233 - AluJo SINE Alu -37 275 1 195 290 16 0 chr10 58775123 58775185 -81541580 + L3b LINE CR1 1140 1202 -381 409 326 103 13 chr10 58775204 58775428 -81541337 - MIR SINE MIR -6 256 13 503 266 208 0 chr10 58775647 58775801 -81540964 - MER5A DNA MER1_type 0 189 4 1689 222 145 25 chr10 58775850 58776327 -81540438 + MLT1F LTR MaLR 1 534 -8 190 256 0 0 chr10 58777838 58777877 -81538888 - MER5A DNA MER1_type -97 92 54 306 259 139 28 chr10 58777895 58778003 -81538762 + L2 LINE L2 3145 3264 -8 2115 133 0 0 chr10 58778153 58778447 -81538318 - AluSx SINE Alu -18 294 1 205 193 35 70 chr10 58778710 58778767 -81537998 - MIR SINE MIR -65 143 89 250 307 26 44 chr10 58778770 58778884 -81537881 + MER5A DNA MER1_type 5 116 -73 341 243 223 0 chr10 58778925 58779028 -81537737 - MER5A DNA MER1_type -1 188 63 1132 152 43 5 chr10 58779037 58779248 -81537517 - L1PA16 LINE L1 -1 6165 5947 336 0 0 0 chr10 58779248 58779287 -81537478 + THE1B LTR MaLR 2 40 -324 22 0 0 0 chr10 58779915 58779937 -81536828 + GC_rich Low_complexity Low_complexity 1 22 0 438 175 211 26 chr10 58781825 58781939 -81534826 - AluJo SINE Alu -177 135 1 2105 119 3 3 chr10 58782849 58783142 -81533623 - AluSx SINE Alu -19 293 1 243 0 0 0 chr10 58783755 58783782 -81532983 + (ATGTG)n Simple_repeat Simple_repeat 4 30 0 2009 153 0 0 chr10 58784106 58784401 -81532364 - AluSx SINE Alu -17 295 1 687 290 24 8 chr10 58784562 58784772 -81531993 - MIR SINE MIR -46 216 11 834 175 18 48 chr10 58785009 58785238 -81531527 + Charlie5 DNA MER1_type 2275 2496 -116 193 243 0 0 chr10 58785253 58785290 -81531475 + MIR SINE MIR 114 150 -58 458 213 31 16 chr10 58785685 58785812 -81530953 - Charlie5 DNA MER1_type 0 2624 2496 739 201 35 55 chr10 58787582 58787811 -81528954 - L1M4 LINE L1 -3167 2979 2754 2136 87 4 11 chr10 58787811 58788088 -81528677 - AluSq SINE Alu 0 313 39 739 201 35 55 chr10 58788088 58788112 -81528653 - L1M4 LINE L1 -3392 2754 2731 494 224 102 0 chr10 58788318 58788465 -81528300 - MER112 DNA MER1_type -98 162 1 308 261 18 18 chr10 58788505 58788616 -81528149 + (CATA)n Simple_repeat Simple_repeat 2 112 0 232 303 145 14 chr10 58789315 58789460 -81527305 + MIR3 SINE MIR 15 178 -30 2099 141 0 3 chr10 58789855 58790160 -81526605 - AluSx SINE Alu -8 304 1 1767 164 11 14 chr10 58790186 58790472 -81526293 + AluJo SINE Alu 2 286 -26 2360 96 0 3 chr10 58791006 58791307 -81525458 - AluSx SINE Alu -12 300 1 259 310 206 25 chr10 58791618 58791899 -81524866 - L2 LINE L2 -433 2881 2550 196 254 90 15 chr10 58792254 58792321 -81524444 - L2 LINE L2 -818 2496 2425 2312 110 0 3 chr10 58792635 58792944 -81523821 - AluSq SINE Alu -5 308 1 197 175 0 138 chr10 58793861 58793941 -81522824 + L2 LINE L2 3159 3227 -86 25 31 0 0 chr10 58794199 58794231 -81522534 + AT_rich Low_complexity Low_complexity 1 32 0 2028 232 103 34 chr10 58794689 58795747 -81521018 - L1ME3A LINE L1 -50 6120 4974 7133 127 27 18 chr10 58795747 58796966 -81519799 - Tigger3b DNA MER2_type -1 1230 1 2028 232 103 34 chr10 58796966 58797048 -81519717 - L1ME3A LINE L1 -1196 4974 4899 629 189 0 38 chr10 58797466 58797598 -81519167 + FLAM_A SINE Alu 4 130 -3 185 355 91 55 chr10 58798928 58799038 -81517727 - L2 LINE L2 -22 3250 3137 563 242 15 91 chr10 58799050 58799248 -81517517 - MIR SINE MIR -10 252 70 1656 171 38 94 chr10 58799390 58799565 -81517200 - Charlie1b DNA MER1_type -2240 521 338 1850 135 57 17 chr10 58799565 58799862 -81516903 + AluSg SINE Alu 1 309 -1 1656 171 38 94 chr10 58799862 58800217 -81516548 - Charlie1b DNA MER1_type -2423 338 21 1146 196 67 23 chr10 58800684 58801001 -81515764 - L1MD3 LINE L1 -18 7977 7555 22 35 0 0 chr10 58801058 58801087 -81515678 + AT_rich Low_complexity Low_complexity 1 29 0 1022 254 132 36 chr10 58801154 58801713 -81515052 - L1ME4a LINE L1 -3 6118 5506 27 0 0 0 chr10 58803030 58803057 -81513708 + AT_rich Low_complexity Low_complexity 1 27 0 400 316 107 25 chr10 58803506 58803702 -81513063 - MIR SINE MIR -14 248 37 977 194 0 0 chr10 58803755 58803920 -81512845 - FRAM SINE Alu 0 166 2 192 97 0 0 chr10 58804010 58804041 -81512724 + (A)n Simple_repeat Simple_repeat 1 31 0 719 221 12 0 chr10 58804210 58804382 -81512383 + MER104 DNA Tc2 1 174 -6 270 340 239 0 chr10 58804424 58804621 -81512144 + L2 LINE L2 2193 2436 -878 360 300 93 27 chr10 58804646 58804796 -81511969 + MIR SINE MIR 44 203 -59 317 304 143 40 chr10 58804823 58805282 -81511483 + L2 LINE L2 2460 3073 -199 223 294 29 0 chr10 58805346 58805414 -81511351 - MIR SINE MIR -81 127 58 207 200 0 60 chr10 58805423 58805473 -81511292 + A-rich Low_complexity Low_complexity 2 48 0 1778 124 34 37 chr10 58805635 58805933 -81510832 + AluJo SINE Alu 1 297 -15 211 234 195 13 chr10 58809041 58809118 -81507647 - L2 LINE L2 -8 3264 3174 181 295 57 76 chr10 58809536 58809641 -81507124 + L2 LINE L2 3201 3303 -10 744 128 34 0 chr10 58810185 58810302 -81506463 + FLAM_C SINE Alu 3 123 -20 287 231 10 14 chr10 58811294 58811398 -81505367 + MIR SINE MIR 117 260 -2 30 69 0 0 chr10 58811565 58811623 -81505142 + AT_rich Low_complexity Low_complexity 1 58 0 965 198 139 32 chr10 58811623 58811875 -81504890 - AluJo SINE Alu -31 281 3 180 0 0 0 chr10 58812297 58812317 -81504448 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 58812694 58812715 -81504050 + AT_rich Low_complexity Low_complexity 1 21 0 1436 237 96 41 chr10 58817623 58818112 -81498653 - MER68 LTR ERV1 -23 539 24 1235 210 93 3 chr10 58818116 58818450 -81498315 - L1MEc LINE L1 -1234 4981 4618 1295 251 190 12 chr10 58818451 58818936 -81497829 - MLT1G LTR MaLR 0 590 20 3733 258 123 39 chr10 58819043 58821527 -81495238 - L1MEc LINE L1 -1676 4539 1885 732 260 69 10 chr10 58821548 58821836 -81494929 - L1MEc LINE L1 -4580 1816 1512 1399 111 0 5 chr10 58821846 58822036 -81494729 - AluSg/x SINE Alu -14 298 110 1717 149 168 8 chr10 58822288 58822657 -81494108 + MSTA LTR MaLR 1 428 0 568 197 30 15 chr10 58822675 58822807 -81493958 + L1MB2 LINE L1 5675 5808 -360 204 167 37 37 chr10 58822813 58822867 -81493898 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 7006 82 6 221 chr10 58822903 58824669 -81492096 + SVA Other Other 36 1430 0 375 155 42 0 chr10 58824670 58824741 -81492024 + L1MB2 LINE L1 5814 5887 -284 558 129 0 0 chr10 58824742 58824827 -81491938 + AluS SINE Alu 220 304 -5 3712 71 6 0 chr10 58824835 58825341 -81491424 + L1P LINE L1 3979 4487 -1659 859 136 0 41 chr10 58826594 58826741 -81490024 + AluJb SINE Alu 157 297 -15 26 30 0 0 chr10 58829660 58829693 -81487072 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr10 58829861 58829897 -81486868 + AT_rich Low_complexity Low_complexity 1 36 0 254 188 0 43 chr10 58830322 58830391 -81486374 - HAL1 LINE L1 -163 2344 2279 630 84 0 0 chr10 58830557 58830640 -81486125 - AluSg SINE Alu -227 83 1 1249 238 59 3 chr10 58830640 58830960 -81485805 - HAL1 LINE L1 -2133 374 37 1790 174 3 26 chr10 58830967 58831272 -81485493 + AluJb SINE Alu 1 298 -14 285 333 13 0 chr10 58831273 58831348 -81485417 - MIR3 SINE MIR -54 154 79 1132 213 137 3 chr10 58833326 58833626 -81483139 + MER58B DNA MER1_type 2 341 0 454 180 0 30 chr10 58834433 58834533 -81482232 + MER105 DNA DNA 85 181 -23 27 29 0 0 chr10 58834878 58834912 -81481853 + AT_rich Low_complexity Low_complexity 1 34 0 270 81 0 0 chr10 58835111 58835148 -81481617 + (TG)n Simple_repeat Simple_repeat 2 38 0 1430 170 52 30 chr10 58835149 58835420 -81481345 - AluJo SINE Alu -35 277 1 916 185 19 12 chr10 58835434 58835596 -81481169 - AluJb SINE Alu -21 291 129 827 158 8 0 chr10 58837626 58837759 -81479006 + FLAM_A SINE Alu 6 139 -3 3342 204 49 2 chr10 58838157 58839054 -81477711 - L1M4 LINE L1 -679 5499 4565 2843 150 69 26 chr10 58840160 58840444 -81476321 - MER41D LTR ERV1 0 557 287 2168 124 0 3 chr10 58840444 58840742 -81476023 + AluSx SINE Alu 1 297 -15 2843 150 69 26 chr10 58840742 58840991 -81475774 - MER41D LTR ERV1 -270 287 1 625 210 180 12 chr10 58841085 58841252 -81475513 + MER20 DNA MER1_type 25 219 0 2900 239 46 11 chr10 58841376 58842023 -81474742 - L1M4 LINE L1 -2443 3703 3015 1916 177 26 0 chr10 58842023 58842362 -81474403 + MER7A DNA MER2_type 1 346 0 2900 239 46 11 chr10 58842362 58842604 -81474161 - L1M4 LINE L1 -3131 3015 2783 209 240 240 0 chr10 58843659 58843755 -81473010 + MIR SINE MIR 112 230 -32 * 215 255 51 51 chr10 58843734 58843832 -81472933 + MIR SINE MIR 74 171 -91 24 0 0 0 chr10 58844046 58844070 -81472695 + AT_rich Low_complexity Low_complexity 1 24 0 1960 122 0 4 chr10 58844901 58845172 -81471593 + AluSx SINE Alu 1 270 -42 1276 225 138 44 chr10 58847313 58847413 -81469352 - MLT1D LTR MaLR -2 503 414 1671 163 29 0 chr10 58847413 58847689 -81469076 + AluJb SINE Alu 13 296 -16 1276 225 138 44 chr10 58847689 58848046 -81468719 - MLT1D LTR MaLR -91 414 3 197 125 25 25 chr10 58848689 58848729 -81468036 + MER5B DNA MER1_type 8 47 -131 1888 140 0 17 chr10 58848742 58849034 -81467731 - AluJo SINE Alu -22 290 4 182 288 96 0 chr10 58849037 58849110 -81467655 + MER5B DNA MER1_type 33 112 -66 978 206 221 7 chr10 58849162 58849565 -81467200 - Charlie2 DNA MER1_type -68 2794 2306 1382 237 43 24 chr10 58849580 58849998 -81466767 + L1ME1 LINE L1 5735 6160 -6 1079 297 61 35 chr10 58850129 58850620 -81466145 + L2 LINE L2 2810 3313 0 406 265 20 0 chr10 58851889 58851987 -81464778 + MIR SINE MIR 147 246 -16 1540 160 0 19 chr10 58852305 58852567 -81464198 + AluJo SINE Alu 12 268 -44 32 26 0 0 chr10 58852578 58852617 -81464148 + AT_rich Low_complexity Low_complexity 1 39 0 533 264 6 63 chr10 58853220 58853394 -81463371 + MER5A DNA MER1_type 26 189 0 200 59 29 0 chr10 58853595 58853629 -81463136 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 407 223 75 141 chr10 58853653 58853725 -81463040 - L1MC4a LINE L1 -1961 5847 5772 2679 32 0 3 chr10 58853725 58854033 -81462732 - AluYa5 SINE Alu -4 307 1 407 223 75 141 chr10 58854033 58854126 -81462639 - L1MC4a LINE L1 -2036 5772 5674 6909 64 3 0 chr10 58854126 58855261 -81461504 - L1PA8 LINE L1 -1 6171 5036 407 223 75 141 chr10 58855261 58855399 -81461366 - L1MC4a LINE L1 -2134 5674 5563 228 263 12 12 chr10 58855411 58855491 -81461274 - L1ME LINE L1 -296 5825 5746 2338 74 3 3 chr10 58856354 58856651 -81460114 + AluSp SINE Alu 1 297 -16 355 240 80 56 chr10 58856961 58857086 -81459679 - L2 LINE L2 -286 3027 2900 348 357 64 26 chr10 58858097 58858363 -81458402 - LTR16B LTR ERVL -188 276 1 760 333 53 64 chr10 58858485 58859364 -81457401 - ERVL LTR ERVL -423 5341 4472 922 252 30 64 chr10 58859501 58859598 -81457167 + L1M4 LINE L1 4824 4923 -1223 1194 174 152 30 chr10 58859598 58859853 -81456912 + AluJo SINE Alu 1 290 -12 225 65 0 0 chr10 58859853 58859884 -81456881 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2316 92 13 7 chr10 58859900 58860203 -81456562 + AluSx SINE Alu 1 305 -7 922 252 30 64 chr10 58860203 58860655 -81456110 + L1M4 LINE L1 4930 5363 -783 833 97 0 8 chr10 58860703 58860827 -81455938 - L1PA5 LINE L1 -1 6153 6031 37646 72 15 2 chr10 58860828 58866898 -81449867 - L1PA5 LINE L1 -2 6152 3 584 250 25 20 chr10 58867014 58867210 -81449555 - L1MC4a LINE L1 -1826 5982 5786 * 2205 265 31 17 chr10 58867208 58867913 -81448852 - L1MC4a LINE L1 -1834 5974 5260 484 227 0 0 chr10 58868031 58868128 -81448637 + FLAM_C SINE Alu 38 134 -9 659 171 0 14 chr10 58868140 58868280 -81448485 + GA-rich Low_complexity Low_complexity 4 141 0 949 216 6 0 chr10 58868282 58868444 -81448321 + FRAM SINE Alu 1 155 -21 2669 88 6 0 chr10 58868473 58868826 -81447939 - THE1A LTR MaLR 0 355 1 11377 91 25 0 chr10 58868826 58870367 -81446398 - THE1A-int LTR MaLR 0 1580 1 2779 77 3 0 chr10 58870367 58870720 -81446045 - THE1A LTR MaLR 0 355 2 341 277 31 15 chr10 58870767 58870962 -81445803 - L1MC4a LINE L1 -1062 5084 4887 1693 143 14 3 chr10 58871049 58871342 -81445423 - L1M2 LINE L1 -610 5681 5386 6960 54 26 0 chr10 58871345 58872321 -81444444 - L1PA5 LINE L1 -2 6152 5164 353 287 40 63 chr10 58872322 58872496 -81444269 - L1MC4a LINE L1 -1332 4814 4645 4545 165 31 7 chr10 58872497 58873645 -81443120 - L1PB4 LINE L1 0 6156 4974 323 298 16 28 chr10 58873654 58873906 -81442859 - L1MC4a LINE L1 -1500 4646 4398 1677 190 14 0 chr10 58873916 58874205 -81442560 - AluJo SINE Alu -19 293 1 443 272 22 84 chr10 58874342 58874665 -81442100 - L1ME4a LINE L1 -296 5825 5523 361 179 26 0 chr10 58874781 58874859 -81441906 - MER116 DNA Mariner 0 80 1 406 300 32 64 chr10 58875251 58875393 -81441372 + MIR SINE MIR 49 183 -79 2309 93 0 3 chr10 58875393 58875693 -81441072 + AluSg SINE Alu 1 299 -11 406 300 32 64 chr10 58875693 58875770 -81440995 + MIR SINE MIR 183 261 -1 22 0 0 0 chr10 58876165 58876187 -81440578 + AT_rich Low_complexity Low_complexity 1 22 0 345 257 18 9 chr10 58876231 58876340 -81440425 - MER117 DNA MER1_type -84 113 4 191 262 33 66 chr10 58876573 58876634 -81440131 - L2 LINE L2 -9 3263 3205 1775 163 9 6 chr10 58876653 58876996 -81439769 - L1MB3 LINE L1 -2 6181 5838 1493 231 88 36 chr10 58877012 58877443 -81439322 - L1ME3A LINE L1 0 6170 5706 1763 160 0 41 chr10 58877443 58877587 -81439178 + AluJo SINE Alu 1 149 -161 2354 92 0 0 chr10 58877587 58877882 -81438883 + AluSc SINE Alu 1 295 -14 1763 160 0 41 chr10 58877882 58878059 -81438706 + AluJo SINE Alu 149 310 0 1493 231 88 36 chr10 58878059 58878126 -81438639 - L1ME3A LINE L1 -464 5706 5644 247 279 89 0 chr10 58878154 58878233 -81438532 - L1ME3A LINE L1 -495 5675 5590 429 336 7 35 chr10 58881154 58881297 -81435468 - L2 LINE L2 0 3272 3134 1737 178 58 83 chr10 58882883 58883401 -81433364 - MLT1D LTR MaLR 0 505 1 2915 183 40 57 chr10 58883637 58884623 -81432142 - L1ME1 LINE L1 -141 6025 5067 231 316 13 0 chr10 58884735 58884814 -81431951 - L1MC4a LINE L1 -460 7348 7269 1012 258 40 52 chr10 58884837 58885459 -81431306 - L1MC4 LINE L1 -752 7209 6652 1498 279 72 44 chr10 58885575 58886814 -81429951 - L1ME3A LINE L1 -1074 5072 3800 2130 105 10 3 chr10 58886833 58887128 -81429637 + AluSx SINE Alu 1 297 -15 291 261 0 0 chr10 58887164 58887229 -81429536 - HAL1 LINE L1 -2432 75 11 377 316 54 26 chr10 58887707 58887907 -81428858 - MIR SINE MIR -50 212 10 1117 254 28 68 chr10 58888086 58888587 -81428178 - L1MC4a LINE L1 -958 6850 6370 22 0 0 0 chr10 58888617 58888639 -81428126 + AT_rich Low_complexity Low_complexity 1 22 0 230 213 0 27 chr10 58888652 58888727 -81428038 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 408 309 85 0 chr10 58888770 58888935 -81427830 - L1MC4a LINE L1 -1768 6040 5862 460 283 48 36 chr10 58888938 58889274 -81427491 - L1MC4a LINE L1 -1005 5141 4802 4024 115 61 42 chr10 58889326 58890080 -81426685 - L1PA15 LINE L1 0 6165 5398 1117 150 116 21 chr10 58890080 58890313 -81426452 + THE1B LTR MaLR 1 255 -109 4315 102 35 153 chr10 58890313 58891245 -81425520 - LTR12 LTR ERV1 0 826 5 2202 171 55 26 chr10 58891275 58891855 -81424910 - pTR5 LTR ERV1 -1099 1339 743 684 136 0 0 chr10 58891855 58891958 -81424807 + THE1B LTR MaLR 252 354 -10 401 98 0 0 chr10 58891960 58892021 -81424744 - L1PA15 LINE L1 -754 5402 5342 1912 228 86 62 chr10 58892025 58892873 -81423892 - L1ME LINE L1 -5193 877 10 2072 152 0 9 chr10 58893401 58893716 -81423049 + AluJb SINE Alu 1 312 0 365 319 122 26 chr10 58893845 58894190 -81422575 - L1ME4a LINE L1 -67 6054 5677 458 260 86 62 chr10 58895033 58895263 -81421502 - MIR SINE MIR -2 260 24 1671 132 0 81 chr10 58895279 58895602 -81421163 - AluSx SINE Alu 0 310 12 220 353 57 49 chr10 58895697 58895819 -81420946 - MIR3 SINE MIR -71 137 15 406 351 40 7 chr10 58895831 58895982 -81420783 - MIR3 SINE MIR -37 171 16 446 250 94 19 chr10 58896788 58896948 -81419817 + Charlie8 DNA MER1_type 85 256 -2161 444 310 95 25 chr10 58897128 58897328 -81419437 - MIR SINE MIR -14 248 35 42 0 0 0 chr10 58898501 58898543 -81418222 + AT_rich Low_complexity Low_complexity 1 42 0 427 143 24 12 chr10 58898587 58898671 -81418094 + LTR40a LTR ERVL 5 89 -430 257 0 30 0 chr10 58898690 58898723 -81418042 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5146 48 2 2 chr10 58898723 58899349 -81417416 - L1PA5 LINE L1 -16 6138 5513 387 330 28 34 chr10 58899349 58899528 -81417237 - MER5A DNA MER1_type -11 178 1 450 315 41 110 chr10 58899650 58900015 -81416750 + L2 LINE L2 2932 3271 -1 516 285 30 18 chr10 58900185 58900350 -81416415 - MIR3 SINE MIR -32 176 10 1819 176 21 69 chr10 58902140 58902573 -81414192 + MLT2D LTR ERVL 3 414 0 397 238 291 13 chr10 58902651 58902802 -81413963 - MIR SINE MIR -13 249 57 843 269 6 11 chr10 58903251 58903433 -81413332 - MER63A DNA MER1_type -3 207 27 299 276 105 0 chr10 58903748 58903853 -81412912 + L2 LINE L2 3193 3308 -5 268 250 8 68 chr10 58903881 58904013 -81412752 + L1ME4a LINE L1 5984 6107 -14 257 313 0 0 chr10 58904325 58904421 -81412344 - L1MEd LINE L1 -3533 2596 2501 391 296 162 45 chr10 58904437 58904974 -81411791 - L1MEd LINE L1 -5074 1045 446 2903 88 6 90 chr10 58905072 58905243 -81411522 - L1MA1 LINE L1 -6 6296 6112 2261 111 3 0 chr10 58905243 58905541 -81411224 - AluSg SINE Alu -9 301 3 2903 88 6 90 chr10 58905541 58905621 -81411144 - L1MA1 LINE L1 -190 6112 6027 2265 108 0 0 chr10 58905621 58905917 -81410848 - AluY SINE Alu -15 296 1 2903 88 6 90 chr10 58905917 58906184 -81410581 - L1MA1 LINE L1 -275 6027 5821 3600 75 14 14 chr10 58906185 58906681 -81410084 - L1MA1 LINE L1 -376 5926 5431 29 28 0 0 chr10 58906983 58907019 -81409746 + AT_rich Low_complexity Low_complexity 1 36 0 3743 123 2 2 chr10 58907020 58907595 -81409170 - L1PB2 LINE L1 -4 6147 5573 7005 180 6 3 chr10 58907595 58908818 -81407947 - L1PBa LINE L1 -5305 1558 333 1127 132 0 0 chr10 58908821 58908980 -81407785 + THE1B LTR MaLR 1 159 -205 401 285 26 7 chr10 58909002 58909153 -81407612 + MER103 DNA DNA 13 166 0 368 307 94 20 chr10 58909347 58909591 -81407174 + MARNA DNA Mariner 264 525 -61 345 270 36 7 chr10 58909622 58909759 -81407006 + L1ME4a LINE L1 5978 6118 -3 289 279 116 39 chr10 58909769 58909898 -81406867 - MIR3 SINE MIR -31 177 39 438 277 39 15 chr10 58910742 58910872 -81405893 - L2 LINE L2 -15 3298 3166 253 301 14 0 chr10 58910959 58911032 -81405733 + MIR3 SINE MIR 82 155 -53 187 265 0 0 chr10 58911040 58911089 -81405676 - L2 LINE L2 0 3272 3224 452 208 0 9 chr10 58911307 58911413 -81405352 + CT-rich Low_complexity Low_complexity 2 106 0 1069 76 0 0 chr10 58912039 58912170 -81404595 - AluSc SINE Alu -178 131 1 267 31 0 0 chr10 58912438 58912470 -81404295 + (TG)n Simple_repeat Simple_repeat 1 32 0 250 268 24 0 chr10 58913184 58913266 -81403499 + L1MEd LINE L1 3 86 -6033 3495 236 92 13 chr10 58913271 58914516 -81402249 - L1MEc LINE L1 -2641 3574 2232 321 92 0 108 chr10 58914535 58914600 -81402165 - MER20 DNA MER1_type -125 94 37 228 164 27 27 chr10 58914600 58914673 -81402092 + CT-rich Low_complexity Low_complexity 2 74 0 245 213 64 0 chr10 58914702 58914749 -81402016 - MER20 DNA MER1_type -169 50 1 1001 271 109 62 chr10 58914749 58914956 -81401809 - L1MEc LINE L1 -4332 2064 1868 1462 167 47 25 chr10 58914956 58915231 -81401534 - AluJb SINE Alu -26 286 6 1001 271 109 62 chr10 58915231 58915519 -81401246 - L1MEc LINE L1 -4528 1868 1595 1160 277 43 45 chr10 58915519 58915984 -81400781 - LTR16B LTR ERVL 0 464 1 230 27 81 0 chr10 58915987 58916024 -81400741 + T-rich Low_complexity Low_complexity 3 42 0 1001 271 109 62 chr10 58916024 58916511 -81400254 - L1MEc LINE L1 -4802 1594 1030 21 36 0 0 chr10 58916654 58916682 -81400083 + AT_rich Low_complexity Low_complexity 1 28 0 1597 164 86 0 chr10 58916978 58917258 -81399507 - AluSx SINE Alu -7 305 2 293 331 126 0 chr10 58917411 58917538 -81399227 - L1MC/D LINE L1 -2079 5729 5587 2690 101 34 10 chr10 58917539 58917947 -81398818 + MLT2A1 LTR ERVL 1 418 -26 494 73 73 118 chr10 58917954 58917997 -81398768 + MLT2A1 LTR ERVL 340 383 -61 300 111 0 0 chr10 58917997 58918042 -81398723 + (TA)n Simple_repeat Simple_repeat 1 45 0 494 73 73 118 chr10 58918042 58918108 -81398657 + MLT2A1 LTR ERVL 383 444 0 402 303 33 8 chr10 58918109 58918231 -81398534 - L1MC/D LINE L1 -2219 5589 5465 389 307 19 56 chr10 58919292 58919507 -81397258 + MIR SINE MIR 7 213 -49 1074 188 72 0 chr10 58919620 58919828 -81396937 + MER58A DNA MER1_type 1 223 -1 382 219 79 33 chr10 58920596 58920763 -81396002 + MIR SINE MIR 20 186 -62 29 28 0 0 chr10 58920785 58920821 -81395944 + AT_rich Low_complexity Low_complexity 1 36 0 361 208 200 8 chr10 58921174 58921294 -81395471 + LTR67 LTR ERVL 415 557 0 583 340 38 8 chr10 58921313 58921551 -81395214 - MIR SINE MIR -12 250 6 699 310 91 3 chr10 58921589 58921928 -81394837 - L1ME4a LINE L1 -224 5897 5529 1212 239 13 23 chr10 58922089 58922394 -81394371 + AluJo SINE Alu 1 302 0 3275 98 4 10 chr10 58922408 58922898 -81393867 + L1MA4A LINE L1 5811 6297 -6 2149 110 3 3 chr10 58922993 58923285 -81393480 + AluSp SINE Alu 1 292 -21 354 156 0 0 chr10 58923343 58923407 -81393358 + (ATG)n Simple_repeat Simple_repeat 1 64 0 270 0 0 0 chr10 58924145 58924175 -81392590 + (CA)n Simple_repeat Simple_repeat 1 30 0 755 198 24 18 chr10 58924177 58924344 -81392421 + MER104 DNA Tc2 3 170 -10 221 272 62 25 chr10 58924475 58924556 -81392209 - MIR3 SINE MIR -31 177 94 767 211 11 5 chr10 58924853 58925225 -81391540 + CT-rich Low_complexity Low_complexity 1 374 0 2151 167 65 0 chr10 58925380 58925752 -81391013 + MSTD LTR MaLR 1 396 0 380 261 23 8 chr10 58926849 58926979 -81389786 - L1ME4a LINE L1 -1 6120 5989 2257 119 0 0 chr10 58928092 58928403 -81388362 + AluY SINE Alu 1 311 0 279 261 17 35 chr10 58928548 58928663 -81388102 + MER104 DNA Tc2 5 117 -63 531 295 24 0 chr10 58929618 58929784 -81386981 + MIR SINE MIR 83 252 -10 22 0 0 0 chr10 58930493 58930515 -81386250 + AT_rich Low_complexity Low_complexity 1 22 0 1322 186 71 8 chr10 58930759 58931011 -81385754 - AluJb SINE Alu -23 289 22 22 56 0 0 chr10 58931092 58931128 -81385637 + AT_rich Low_complexity Low_complexity 1 36 0 324 265 104 72 chr10 58931875 58932124 -81384641 - L1ME4a LINE L1 -24 6097 5841 1339 271 111 31 chr10 58932429 58933240 -81383525 - L1M1 LINE L1 -3900 3665 2790 4598 187 20 20 chr10 58933252 58934722 -81382043 + L1MB1 LINE L1 4675 6146 -22 667 231 186 24 chr10 58934880 58935437 -81381328 - LTR50 LTR ERVL -9 786 2 681 134 98 0 chr10 58935593 58935705 -81381060 + Tigger1 DNA MER2_type 1192 1314 -1104 15266 135 19 4 chr10 58936156 58937413 -81379352 + Tigger1 DNA MER2_type 1 1312 -1106 2069 130 144 5 chr10 58937413 58937789 -81378976 - MSTA LTR MaLR 0 428 1 15266 135 19 4 chr10 58937789 58938912 -81377853 + Tigger1 DNA MER2_type 1312 2417 -1 298 302 144 43 chr10 58938987 58939265 -81377500 - L2 LINE L2 0 3313 3008 2237 116 33 28 chr10 58939342 58939704 -81377061 + THE1B LTR MaLR 1 364 0 191 318 32 0 chr10 58940592 58940655 -81376110 - MER5B DNA MER1_type -68 110 46 1590 180 52 0 chr10 58940674 58940941 -81375824 - AluJo SINE Alu -31 281 1 582 155 0 0 chr10 58940941 58941038 -81375727 + MLT1D LTR MaLR 408 504 -1 740 246 58 5 chr10 58941414 58941605 -81375160 - MER20 DNA MER1_type 0 219 19 3142 153 23 23 chr10 58941692 58942249 -81374516 + MER41D LTR ERV1 1 557 0 214 340 62 21 chr10 58943009 58943153 -81373612 + L2 LINE L2 2420 2569 -745 2326 208 49 3 chr10 58943357 58943928 -81372837 + L1M4 LINE L1 4565 5161 -985 186 43 0 0 chr10 58943931 58943954 -81372811 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 1150 140 0 0 chr10 58943957 58944114 -81372651 - AluSg/x SINE Alu -30 280 124 500 269 36 36 chr10 58944152 58944371 -81372394 - HAL1b LINE L1 -860 488 270 835 165 0 0 chr10 58944399 58944532 -81372233 - FRAM SINE Alu -10 166 34 546 86 0 12 chr10 58945561 58945642 -81371123 - MADE1 DNA Mariner 0 80 1 505 243 89 97 chr10 58945817 58945991 -81370774 - MIR SINE MIR 0 262 89 1896 251 41 42 chr10 58945991 58946581 -81370184 + MLT1E LTR MaLR 5 593 0 505 243 89 97 chr10 58946581 58946665 -81370100 - MIR SINE MIR -173 89 6 486 291 35 52 chr10 58946836 58947008 -81369757 - MIR3 SINE MIR -8 200 32 460 237 98 29 chr10 58947255 58947428 -81369337 + MER117 DNA MER1_type 6 190 -7 198 0 0 0 chr10 58947750 58947772 -81368993 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 381 22 0 0 chr10 58948479 58948525 -81368240 + (TG)n Simple_repeat Simple_repeat 1 46 0 279 114 0 0 chr10 58948527 58948571 -81368194 + (GA)n Simple_repeat Simple_repeat 2 45 0 911 75 0 15 chr10 58948821 58948865 -81367900 - L1PA4 LINE L1 -172 5983 5940 231 270 30 20 chr10 58948865 58948954 -81367811 - L1MA6 LINE L1 -359 5941 5849 1271 20 7 0 chr10 58948954 58949106 -81367659 + L1PA4 LINE L1 6002 6154 -1 481 287 121 11 chr10 58949147 58949321 -81367444 + MIR SINE MIR 70 262 0 207 250 0 21 chr10 58949716 58949764 -81367001 + MIR3 SINE MIR 111 157 -51 216 323 31 0 chr10 58949809 58949874 -81366891 + MIR SINE MIR 82 148 -60 223 246 116 14 chr10 58950043 58950112 -81366653 - L2 LINE L2 -37 3276 3201 204 135 0 0 chr10 58950129 58950166 -81366599 + (ATG)n Simple_repeat Simple_repeat 3 39 0 22 80 0 0 chr10 58951086 58951136 -81365629 + AT_rich Low_complexity Low_complexity 1 50 0 1576 253 125 51 chr10 58951193 58952079 -81364686 - HAL1 LINE L1 -42 2465 1514 1437 328 128 39 chr10 58952097 58953787 -81362978 + L2 LINE L2 1137 2952 -362 736 235 25 56 chr10 58953798 58953994 -81362771 + MIR SINE MIR 2 191 -71 496 319 85 21 chr10 58953997 58954326 -81362439 + L2 LINE L2 2954 3303 -10 306 298 21 21 chr10 58954564 58954658 -81362107 + MIR SINE MIR 45 138 -70 421 269 110 100 chr10 58955769 58956312 -81360453 - L1M2 LINE L1 -5532 1317 531 1339 121 18 176 chr10 58958310 58958697 -81358068 - MER7A DNA MER2_type 0 346 23 507 275 113 31 chr10 58958700 58958922 -81357843 + MIR SINE MIR 23 262 0 242 328 0 0 chr10 58958956 58959020 -81357745 + L2 LINE L2 3245 3308 -5 23 0 0 0 chr10 58960136 58960159 -81356606 + AT_rich Low_complexity Low_complexity 1 23 0 394 267 127 41 chr10 58960691 58960912 -81355853 + MIR SINE MIR 8 247 -15 459 274 44 0 chr10 58961389 58961524 -81355241 + MIR SINE MIR 116 256 -6 433 247 45 34 chr10 58962052 58962230 -81354535 - MLT1J LTR MaLR -19 492 313 24 0 0 0 chr10 58962665 58962689 -81354076 + AT_rich Low_complexity Low_complexity 1 24 0 260 122 24 0 chr10 58962690 58962731 -81354034 - MER57A LTR ERV1 -67 336 295 362 259 43 7 chr10 58963780 58963919 -81352846 - L1ME4a LINE L1 -10 6111 5968 288 316 20 20 chr10 58963956 58964054 -81352711 - L2 LINE L2 -24 3289 3192 329 283 55 14 chr10 58964070 58964215 -81352550 - L1ME4a LINE L1 -232 5889 5739 472 230 218 6 chr10 58964249 58964423 -81352342 + MIR SINE MIR 40 250 -12 243 0 0 0 chr10 58964826 58964853 -81351912 + (T)n Simple_repeat Simple_repeat 1 27 0 320 336 16 16 chr10 58964867 58964992 -81351773 - MER5A DNA MER1_type -64 125 1 21458 35 8 1 chr10 58965349 58968764 -81348001 + L1PA4 LINE L1 2736 6153 -2 200 343 15 44 chr10 58969120 58969257 -81347508 - MIR SINE MIR -6 256 124 6846 46 12 2 chr10 58969435 58970785 -81345980 - L1PA5 LINE L1 0 6154 4838 362 80 0 0 chr10 58970785 58970835 -81345930 + L1PA5 LINE L1 4797 4846 -1300 234 283 358 8 chr10 58971708 58971828 -81344937 + MIR3 SINE MIR 31 192 -16 581 285 70 80 chr10 58973885 58974285 -81342480 + L1MB2 LINE L1 421 816 -5487 2576 240 56 34 chr10 58974436 58975309 -81341456 + L1MB2 LINE L1 799 1651 -4731 6849 135 65 39 chr10 58975309 58976577 -81340188 + HSMAR2 DNA Mariner 2 1301 -1 2576 240 56 34 chr10 58976577 58977200 -81339565 + L1MB2 LINE L1 1651 2598 -3784 519 280 28 3 chr10 58977238 58977404 -81339361 + L1PB3 LINE L1 3 189 -6673 12680 197 64 13 chr10 58977428 58982590 -81334175 + L1PB3 LINE L1 1403 6870 0 10978 205 51 23 chr10 58982603 58984914 -81331851 + L1MB2 LINE L1 2631 4876 -1531 1978 164 0 3 chr10 58984914 58985225 -81331540 + AluJb SINE Alu 1 310 -2 10978 205 51 23 chr10 58985225 58986568 -81330197 + L1MB2 LINE L1 4876 6377 -30 1727 171 7 7 chr10 58986568 58986855 -81329910 - AluJo SINE Alu -25 287 1 10978 205 51 23 chr10 58986855 58986887 -81329878 + L1MB2 LINE L1 6377 6407 0 1592 179 36 94 chr10 58987796 58988210 -81328555 + MLT1B LTR MaLR 1 390 0 649 295 26 26 chr10 58989319 58989553 -81327212 - Charlie8 DNA MER1_type -2141 276 43 27 49 0 0 chr10 58989751 58989792 -81326973 + AT_rich Low_complexity Low_complexity 1 41 0 9921 174 76 52 chr10 58990054 58991928 -81324837 - L1MC3 LINE L1 -7 7778 5951 1637 167 53 0 chr10 58991928 58992192 -81324573 - AluJb SINE Alu -34 278 1 9921 174 76 52 chr10 58992192 58992722 -81324043 - L1MC3 LINE L1 -1834 5951 5435 2203 121 0 10 chr10 58992722 58993035 -81323730 - AluSx SINE Alu -2 310 1 9921 174 76 52 chr10 58993035 58993076 -81323689 - L1MC3 LINE L1 -2350 5435 5396 1601 178 7 27 chr10 58993076 58993368 -81323397 - AluJo SINE Alu -26 286 1 9921 174 76 52 chr10 58993368 58993869 -81322896 - L1MC3 LINE L1 -2389 5396 4769 409 239 39 58 chr10 58994109 58994264 -81322501 + L2 LINE L2 3142 3293 -20 2027 136 20 44 chr10 58994402 58994808 -81321957 - L1MA8 LINE L1 -5 6286 5891 652 122 0 0 chr10 58994824 58994922 -81321843 + MLT1D LTR MaLR 408 505 0 2136 76 0 0 chr10 58995360 58995660 -81321105 - AluY SINE Alu 0 321 22 319 323 32 0 chr10 58995725 58995818 -81320947 + MIR SINE MIR 31 126 -82 27 49 0 0 chr10 58995977 58996018 -81320747 + AT_rich Low_complexity Low_complexity 1 41 0 1889 206 61 35 chr10 58996176 58996667 -81320098 + MLT1D LTR MaLR 2 505 0 21 71 0 0 chr10 58997071 58997113 -81319652 + AT_rich Low_complexity Low_complexity 1 42 0 201 339 31 54 chr10 58997264 58997394 -81319371 - MIR SINE MIR -63 145 19 27 29 0 0 chr10 58997924 58997958 -81318807 + AT_rich Low_complexity Low_complexity 1 34 0 252 0 0 0 chr10 58998353 58998381 -81318384 + (T)n Simple_repeat Simple_repeat 1 28 0 637 203 60 0 chr10 58999962 59000095 -81316670 + MLT1D LTR MaLR 1 141 -364 3822 263 105 16 chr10 59000096 59001658 -81315107 - L1MEc LINE L1 -4652 1744 44 1725 188 22 25 chr10 59001705 59002066 -81314699 - MLT1A1 LTR MaLR -2 363 4 6441 198 58 23 chr10 59002360 59006018 -81310747 - L1 LINE L1 -1716 5492 1728 1480 264 92 59 chr10 59005994 59006702 -81310063 - L1 LINE L1 -6476 733 3 * 29 60 0 0 chr10 59007117 59007167 -81309598 + AT_rich Low_complexity Low_complexity 1 50 0 213 338 0 12 chr10 59007482 59007562 -81309203 - MIR SINE MIR -118 144 66 226 284 137 21 chr10 59008290 59008385 -81308380 - L2 LINE L2 -17 3255 3150 2131 86 98 3 chr10 59008870 59009196 -81307569 - L1PB1 LINE L1 -4 6147 5791 295 296 0 12 chr10 59009233 59009405 -81307360 + (TA)n Simple_repeat Simple_repeat 1 170 0 2698 106 5 5 chr10 59009413 59009830 -81306935 - L1PB1 LINE L1 -360 5791 5375 216 237 15 74 chr10 59010453 59010588 -81306177 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 27 0 0 0 chr10 59010614 59010641 -81306124 + AT_rich Low_complexity Low_complexity 1 27 0 187 330 96 0 chr10 59010927 59011042 -81305723 - L2 LINE L2 -319 2953 2828 231 287 188 50 chr10 59011077 59011279 -81305486 + MIR SINE MIR 30 259 -3 5127 77 0 0 chr10 59012453 59013112 -81303653 - L1PA7 LINE L1 -15 6139 5481 22 0 0 0 chr10 59014348 59014370 -81302395 + AT_rich Low_complexity Low_complexity 1 22 0 6227 100 60 0 chr10 59014370 59015466 -81301299 - L1PA11 LINE L1 -2 6172 5052 217 169 92 0 chr10 59015943 59016008 -81300757 + (TTATG)n Simple_repeat Simple_repeat 5 75 0 1597 234 39 25 chr10 59017613 59018060 -81298705 - Charlie1b DNA MER1_type -2239 522 66 2076 61 0 4 chr10 59018060 59018324 -81298441 - L1PA8 LINE L1 0 6172 5910 1597 234 39 25 chr10 59018324 59018390 -81298375 - Charlie1b DNA MER1_type -2695 66 2 196 309 62 31 chr10 59018393 59018490 -81298275 - MIR SINE MIR -44 218 119 21 0 0 0 chr10 59018548 59018569 -81298196 + AT_rich Low_complexity Low_complexity 1 21 0 551 261 0 8 chr10 59018639 59018769 -81297996 - FLAM_A SINE Alu -4 129 1 557 238 98 60 chr10 59019318 59019553 -81297212 - MER5C DNA MER1_type -80 244 1 396 279 176 44 chr10 59020204 59020408 -81296357 - MIR SINE MIR -12 250 20 21 36 0 0 chr10 59022382 59022410 -81294355 + AT_rich Low_complexity Low_complexity 1 28 0 542 164 33 93 chr10 59023025 59023074 -81293691 - L1MB1 LINE L1 0 6168 6118 2123 122 7 0 chr10 59023074 59023370 -81293395 - AluSx SINE Alu -14 298 1 542 164 33 93 chr10 59023370 59023391 -81293374 - L1MB1 LINE L1 -50 6118 6097 1560 130 0 13 chr10 59023391 59023630 -81293135 + MER46A DNA MER2_type 1 236 0 542 164 33 93 chr10 59023630 59023741 -81293024 - L1MB1 LINE L1 -71 6097 5997 21 0 0 0 chr10 59024353 59024374 -81292391 + AT_rich Low_complexity Low_complexity 1 21 0 300 312 161 35 chr10 59024831 59025228 -81291537 - L1MC4a LINE L1 -1635 6173 5727 400 316 86 0 chr10 59025235 59025444 -81291321 - L1MC4a LINE L1 -2194 5614 5388 1814 192 106 35 chr10 59025594 59026058 -81290707 - MLT1D LTR MaLR -8 497 1 333 338 48 43 chr10 59026061 59026268 -81290497 + L2 LINE L2 2331 2538 -776 3953 91 31 32 chr10 59026279 59026631 -81290134 - L1PB1 LINE L1 0 6151 5799 387 0 0 0 chr10 59026631 59026674 -81290091 + (TG)n Simple_repeat Simple_repeat 2 44 0 3953 91 31 32 chr10 59026674 59026939 -81289826 - L1PB1 LINE L1 -352 5799 5535 442 178 0 0 chr10 59026941 59027014 -81289751 - AluJ/FLAM SINE Alu -239 73 1 405 0 0 0 chr10 59027102 59027147 -81289618 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 250 0 10 chr10 59027709 59027813 -81288952 + MER81 DNA DNA 2 104 -10 216 97 0 0 chr10 59029241 59029272 -81287493 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 263 274 36 36 chr10 59029437 59029521 -81287244 - L2 LINE L2 -15 3257 3174 894 89 0 107 chr10 59029521 59029689 -81287076 + AluSg/x SINE Alu 157 306 -6 272 270 34 0 chr10 59029711 59029842 -81286923 + (CATA)n Simple_repeat Simple_repeat 1 135 0 227 223 223 11 chr10 59031954 59032048 -81284717 + MER81 DNA DNA 1 114 0 592 256 37 37 chr10 59032158 59032373 -81284392 + LTR16C LTR ERVL 277 491 0 346 271 52 10 chr10 59032377 59032473 -81284292 - MIR SINE MIR -99 163 64 1771 169 10 26 chr10 59032508 59032821 -81283944 - AluJo SINE Alu -4 308 1 24 0 0 0 chr10 59032826 59032850 -81283915 + AT_rich Low_complexity Low_complexity 1 24 0 932 205 0 0 chr10 59032850 59033016 -81283749 - FAM SINE Alu -9 166 1 1523 151 136 15 chr10 59034375 59034699 -81282066 - MLT1A1 LTR MaLR 0 365 3 2213 84 3 13 chr10 59035477 59035775 -81280990 + AluY SINE Alu 1 295 -16 1402 80 0 0 chr10 59035775 59035950 -81280815 + AluSc SINE Alu 133 307 -2 21270 114 71 11 chr10 59035961 59040100 -81276665 + L1PA7 LINE L1 490 4955 -1506 5627 53 155 86 chr10 59040107 59041205 -81275560 - MER11A LTR ERVK 0 1266 1 6720 76 8 0 chr10 59041207 59042707 -81274058 + L1PA7 LINE L1 4959 6467 -2 234 0 0 0 chr10 59042976 59043002 -81273763 + (TG)n Simple_repeat Simple_repeat 2 27 0 2152 150 57 26 chr10 59043645 59044064 -81272701 + Tigger2a DNA MER2_type 2 433 -1 279 0 0 0 chr10 59044187 59044218 -81272547 + (TA)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 59044235 59044259 -81272506 + AT_rich Low_complexity Low_complexity 1 24 0 269 260 55 39 chr10 59044613 59044740 -81272025 - L1ME LINE L1 -457 5664 5536 311 235 37 88 chr10 59046394 59046530 -81270235 - MER5A DNA MER1_type 0 189 61 229 311 53 45 chr10 59046435 59046567 -81270198 + MER5A DNA MER1_type 44 176 -13 * 2022 72 34 4 chr10 59047434 59047697 -81269068 + AluY SINE Alu 1 271 -40 1912 165 28 8 chr10 59047802 59048160 -81268605 - MLT1A1 LTR MaLR 0 365 1 1285 264 110 57 chr10 59048254 59048558 -81268207 - HAL1 LINE L1 -16 2491 2204 1726 165 62 3 chr10 59048558 59048879 -81267886 + MER2 DNA MER2_type 4 343 -1 1285 264 110 57 chr10 59048879 59049459 -81267306 - HAL1 LINE L1 -303 2204 1523 1301 30 6 6 chr10 59049459 59049623 -81267142 + L1PA3 LINE L1 5992 6155 0 1285 264 110 57 chr10 59049623 59049948 -81266817 - HAL1 LINE L1 -984 1523 1217 2192 85 3 0 chr10 59050081 59050391 -81266374 + AluSp SINE Alu 1 311 0 209 227 11 48 chr10 59050523 59050715 -81266050 + CT-rich Low_complexity Low_complexity 1 184 0 314 323 11 11 chr10 59051752 59051845 -81264920 - MIR SINE MIR -136 126 34 1260 181 73 3 chr10 59052497 59052800 -81263965 - MER33 DNA MER1_type 0 324 1 304 240 31 23 chr10 59054302 59054431 -81262334 - L1ME4a LINE L1 -58 6063 5934 2101 128 20 0 chr10 59054512 59054685 -81262080 - AluSx SINE Alu -2 310 127 189 0 0 0 chr10 59054685 59054706 -81262059 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2101 128 20 0 chr10 59054706 59054836 -81261929 - AluSx SINE Alu -185 127 1 25 31 0 0 chr10 59056999 59057031 -81259734 + AT_rich Low_complexity Low_complexity 1 32 0 2144 165 11 11 chr10 59058368 59058725 -81258040 + LTR18A LTR ERVL 1 357 0 2356 212 10 24 chr10 59058743 59059248 -81257517 + HERVL18 LTR ERVL 1 498 -5549 1966 223 56 16 chr10 59059242 59059690 -81257075 + HERVL18 LTR ERVL 1149 1614 -4433 * 1052 113 125 2 chr10 59059723 59059969 -81256796 + HERVL18 LTR ERVL 2119 2452 -3595 * 4355 174 11 41 chr10 59059968 59060854 -81255911 + HERVL18 LTR ERVL 2720 3579 -2468 610 149 11 0 chr10 59060856 59060950 -81255815 + HERVL18 LTR ERVL 4394 4488 -1559 314 228 0 0 chr10 59060952 59061009 -81255756 + HERVL18 LTR ERVL 5211 5267 -780 579 176 0 0 chr10 59061009 59061111 -81255654 + HERVL18 LTR ERVL 5946 6047 0 1899 155 2 108 chr10 59061293 59061692 -81255073 + LTR18A LTR ERVL 1 357 0 1734 198 82 59 chr10 59061785 59062275 -81254490 - MLT1D LTR MaLR -4 501 1 2099 82 8 0 chr10 59062525 59062781 -81253984 - AluSc SINE Alu -13 296 39 21 36 0 0 chr10 59064330 59064358 -81252407 + AT_rich Low_complexity Low_complexity 1 28 0 1714 170 0 74 chr10 59064577 59064670 -81252095 + AluJb SINE Alu 1 99 -213 1816 165 29 0 chr10 59064670 59064949 -81251816 + AluSx SINE Alu 1 287 -25 603 0 0 0 chr10 59064950 59065017 -81251748 + (AATAG)n Simple_repeat Simple_repeat 2 68 0 1714 170 0 74 chr10 59065017 59065257 -81251508 + AluJb SINE Alu 98 311 -1 26 0 0 0 chr10 59066275 59066301 -81250464 + AT_rich Low_complexity Low_complexity 1 26 0 286 314 6 0 chr10 59066796 59066919 -81249846 - MLT1J2 LTR MaLR -237 209 85 1522 168 71 7 chr10 59067108 59067418 -81249347 - MLT1C LTR MaLR -137 330 1 2211 127 0 0 chr10 59067630 59067937 -81248828 - AluSx SINE Alu -2 310 4 22 56 0 0 chr10 59067995 59068031 -81248734 + AT_rich Low_complexity Low_complexity 1 36 0 2242 99 10 0 chr10 59069869 59070161 -81246604 + AluSp SINE Alu 1 295 -18 699 240 158 24 chr10 59070835 59071247 -81245518 + L1ME4a LINE L1 5654 6120 -1 461 321 102 5 chr10 59071558 59071745 -81245020 - L3 LINE CR1 -344 1233 1029 970 173 6 17 chr10 59073461 59073640 -81243125 - FRAM SINE Alu 0 176 1 366 23 0 0 chr10 59075889 59075932 -81240833 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2053 135 71 0 chr10 59076043 59076383 -81240382 + THE1B LTR MaLR 1 364 0 2278 107 13 3 chr10 59077028 59077338 -81239427 - AluSq SINE Alu 0 313 1 603 244 79 30 chr10 59077450 59077614 -81239151 - MER5B DNA MER1_type -6 172 1 2102 159 42 42 chr10 59077691 59078125 -81238640 - Tigger2a DNA MER2_type 0 434 1 256 356 74 20 chr10 59079176 59079325 -81237440 - MIR3 SINE MIR -6 202 46 204 40 0 0 chr10 59079628 59079653 -81237112 + (TCC)n Simple_repeat Simple_repeat 1 25 0 481 299 142 10 chr10 59079735 59079939 -81236826 + MIR SINE MIR 20 250 -12 202 198 136 74 chr10 59081804 59081885 -81234880 + MIR3 SINE MIR 108 193 -15 378 93 67 0 chr10 59081886 59081961 -81234804 + T-rich Low_complexity Low_complexity 1 80 0 1365 82 82 8 chr10 59081996 59082240 -81234525 - L1MA8 LINE L1 -2 6289 6028 2157 85 6 69 chr10 59082444 59082763 -81234002 - AluSx SINE Alu -13 299 1 1479 105 57 0 chr10 59082766 59082975 -81233790 - AluJb SINE Alu -7 305 85 368 291 7 57 chr10 59083654 59083795 -81232970 - L2 LINE L2 -3 3269 3136 427 89 67 78 chr10 59084813 59084903 -81231862 - L1MB2 LINE L1 -7 6164 6076 1729 164 14 11 chr10 59085713 59086050 -81230715 - AluJb SINE Alu 0 338 1 2651 49 7 0 chr10 59088174 59088482 -81228283 + AluY SINE Alu 1 310 -1 377 260 123 48 chr10 59089972 59090199 -81226566 - L1ME4a LINE L1 0 6121 5878 264 59 0 0 chr10 59091631 59091665 -81225100 + (TC)n Simple_repeat Simple_repeat 2 35 0 394 294 228 27 chr10 59092770 59092954 -81223811 - MIR SINE MIR -39 223 3 257 250 128 33 chr10 59092989 59093169 -81223596 + MER112 DNA MER1_type 7 203 -57 197 250 0 0 chr10 59095882 59095922 -81220843 + L2 LINE L2 3217 3256 -16 12393 24 0 0 chr10 59096727 59098951 -81217814 - L1PA2 LINE L1 0 6155 3932 5784 44 0 1 chr10 59098951 59099705 -81217060 + L1PA2 LINE L1 3196 3948 -2198 333 278 7 76 chr10 59100793 59100937 -81215828 - L1MC4a LINE L1 -1926 5882 5749 2021 257 68 40 chr10 59101006 59101244 -81215521 - L1MC4 LINE L1 -593 7449 7219 1982 135 7 3 chr10 59101244 59101533 -81215232 - AluSx SINE Alu -22 290 1 2021 257 68 40 chr10 59101533 59102087 -81214678 - L1MC4 LINE L1 -823 7219 6635 4254 104 68 3 chr10 59102120 59102767 -81213998 + L1PA15 LINE L1 5472 6160 -5 234 146 21 21 chr10 59103849 59103897 -81212868 + MER5B DNA MER1_type 131 178 0 355 215 0 0 chr10 59105980 59106045 -81210720 + L2 LINE L2 3249 3313 0 2232 125 0 0 chr10 59106101 59106413 -81210352 - AluSx SINE Alu 0 312 1 2145 138 21 3 chr10 59106516 59106849 -81209916 + MER1B DNA MER1_type 1 339 0 2044 224 74 12 chr10 59106852 59107536 -81209229 - L1ME1 LINE L1 -246 5920 5192 1717 255 46 43 chr10 59107561 59108278 -81208487 - L1MCc LINE L1 -4887 1536 818 2789 122 9 7 chr10 59109073 59109506 -81207259 - MER57B LTR ERV1 0 434 1 318 247 86 0 chr10 59109684 59109777 -81206988 + MIR SINE MIR 71 171 -91 195 370 89 15 chr10 59110737 59110872 -81205893 - MIR3 SINE MIR -31 177 33 27 29 0 0 chr10 59111043 59111077 -81205688 + AT_rich Low_complexity Low_complexity 1 34 0 618 159 152 0 chr10 59112207 59112339 -81204426 - MER46A DNA MER2_type -84 152 1 23 0 0 0 chr10 59113155 59113178 -81203587 + AT_rich Low_complexity Low_complexity 1 23 0 411 344 66 18 chr10 59113547 59113774 -81202991 - L2 LINE L2 -785 2529 2292 1070 167 41 12 chr10 59113781 59114027 -81202738 + L1ME2 LINE L1 5696 5948 -216 544 275 137 63 chr10 59114205 59114630 -81202135 - MLT1J LTR MaLR 0 511 56 566 313 83 71 chr10 59114676 59115098 -81201667 + L2 LINE L2 1713 2139 -1175 1445 114 4 0 chr10 59115098 59115325 -81201440 - L1MB3 LINE L1 -3 6180 5953 271 354 0 0 chr10 59115377 59115459 -81201306 + L2 LINE L2 3191 3272 0 287 356 0 0 chr10 59115640 59115727 -81201038 + L2 LINE L2 3127 3213 -59 193 214 24 0 chr10 59116370 59116412 -81200353 - L2 LINE L2 -4 3309 3267 2092 122 0 28 chr10 59116641 59116962 -81199803 - AluSx SINE Alu 0 312 1 393 256 69 12 chr10 59117051 59117211 -81199554 + Charlie8 DNA MER1_type 38 206 -2211 1270 190 43 7 chr10 59118396 59118838 -81197927 + L1MA9 LINE L1 5738 6293 -19 28726 120 23 51 chr10 59118874 59124668 -81192097 + L1P3 LINE L1 12 5626 -528 1707 62 0 0 chr10 59124668 59124892 -81191873 - LTR12 LTR ERV1 0 714 491 37456 73 10 8 chr10 59124896 59131023 -81185742 - L1PA5 LINE L1 0 6154 1 888 108 0 0 chr10 59131023 59131152 -81185613 - LTR12 LTR ERV1 -209 505 377 320 233 11 0 chr10 59131153 59131243 -81185522 - LTR30 LTR ERV1 -80 642 552 1408 63 90 137 chr10 59131243 59131542 -81185223 - LTR12 LTR ERV1 -429 285 1 4101 69 2 0 chr10 59131542 59132065 -81184700 + L1PA7 LINE L1 5623 6146 -8 260 257 37 37 chr10 59132319 59132428 -81184337 - MLT1L LTR MaLR -340 275 167 293 275 57 105 chr10 59133262 59133596 -81183169 + MLT1I LTR MaLR 69 386 -23 1024 196 68 32 chr10 59134005 59134286 -81182479 - L1MA10 LINE L1 -1 6333 6043 475 212 59 36 chr10 59134550 59134713 -81182052 + Charlie8 DNA MER1_type 1 189 -2228 231 36 0 0 chr10 59135197 59135225 -81181540 + (GA)n Simple_repeat Simple_repeat 1 28 0 4272 197 44 41 chr10 59135397 59135895 -81180870 - Tigger6a DNA MER2_type -515 1082 587 7459 36 0 0 chr10 59135895 59137029 -81179736 - L1PA4 LINE L1 -3 6152 5018 4272 197 44 41 chr10 59137029 59137609 -81179156 - Tigger6a DNA MER2_type -1010 587 1 231 332 180 3 chr10 59137966 59138133 -81178632 + MIR SINE MIR 17 206 -56 23 0 0 0 chr10 59139239 59139262 -81177503 + AT_rich Low_complexity Low_complexity 1 23 0 660 300 38 68 chr10 59141342 59141712 -81175053 + L2 LINE L2 2871 3229 -43 544 284 168 0 chr10 59141755 59141963 -81174802 - MIR SINE MIR -16 246 4 1967 172 10 0 chr10 59142715 59143023 -81173742 - AluJo SINE Alu -1 311 1 651 241 69 18 chr10 59143735 59144002 -81172763 - Charlie8 DNA MER1_type -2172 245 29 1960 148 17 7 chr10 59146196 59146493 -81170272 - AluJb SINE Alu -12 300 1 186 333 9 54 chr10 59148155 59148266 -81168499 - MER5A DNA MER1_type -68 121 16 599 192 7 33 chr10 59148727 59148878 -81167887 - L1PA16 LINE L1 -9 6157 6011 2122 151 24 16 chr10 59149551 59149923 -81166842 + THE1C LTR MaLR 1 375 0 1179 133 0 0 chr10 59150560 59150725 -81166040 - AluSg/x SINE Alu -11 301 137 180 0 0 0 chr10 59150725 59150745 -81166020 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2152 85 7 3 chr10 59150745 59151028 -81165737 - AluSp SINE Alu -29 284 1 1298 163 107 45 chr10 59151034 59151323 -81165442 - AluSx SINE Alu -5 307 1 2293 125 12 26 chr10 59151327 59151408 -81165357 - L1MA5 LINE L1 -7 6293 6212 2946 157 35 58 chr10 59151408 59152034 -81164731 - LTR9 LTR ERV1 0 612 1 2293 125 12 26 chr10 59152034 59152375 -81164390 - L1MA5 LINE L1 -88 6212 5877 264 342 63 9 chr10 59152496 59152607 -81164158 + L2 LINE L2 3150 3266 -6 549 302 52 57 chr10 59153070 59153318 -81163447 - MIR SINE MIR -8 254 8 1752 186 3 0 chr10 59153873 59154174 -81162591 - AluJo SINE Alu -5 307 6 857 178 6 23 chr10 59155201 59155375 -81161390 + FRAM SINE Alu 1 40 0 2025 137 0 7 chr10 59156645 59156951 -81159814 + AluSx SINE Alu 1 304 -8 331 151 0 2 chr10 59157858 59157915 -81158850 - L1MA1 LINE L1 -413 5878 5823 4077 182 30 24 chr10 59159247 59160111 -81156654 - MER4D LTR ERV1 0 872 4 2372 104 8 25 chr10 59162942 59163307 -81153458 + MER1A DNA MER1_type 171 529 0 1146 155 44 0 chr10 59164110 59164316 -81152449 + MER46A DNA MER2_type 22 236 0 405 0 0 0 chr10 59164546 59164591 -81152174 + (TG)n Simple_repeat Simple_repeat 2 46 0 2009 154 0 3 chr10 59164801 59165100 -81151665 - AluJb SINE Alu -14 298 1 326 325 108 41 chr10 59165115 59165309 -81151456 + L1ME LINE L1 5491 5697 -465 21 36 0 0 chr10 59165577 59165605 -81151160 + AT_rich Low_complexity Low_complexity 1 28 0 259 299 195 23 chr10 59166343 59166517 -81150248 + MIR SINE MIR 47 250 -12 285 286 0 0 chr10 59169212 59169275 -81147490 + MIR3 SINE MIR 131 193 -15 439 113 0 0 chr10 59169803 59169874 -81146891 - L1PA16 LINE L1 -1 6165 6095 2849 193 6 11 chr10 59169875 59170519 -81146246 - L1 LINE L1 -1142 5004 4364 21 36 0 0 chr10 59171546 59171574 -81145191 + AT_rich Low_complexity Low_complexity 1 28 0 213 350 85 34 chr10 59172360 59172695 -81144070 + L2 LINE L2 2592 3099 -173 623 268 121 21 chr10 59173196 59173386 -81143379 + MIR SINE MIR 31 239 -23 1865 151 3 16 chr10 59174614 59174926 -81141839 + AluJb SINE Alu 1 308 -4 2081 127 0 0 chr10 59175391 59175703 -81141062 + AluSx SINE Alu 1 312 0 269 258 11 56 chr10 59175729 59175818 -81140947 + L2 LINE L2 3229 3313 0 389 323 0 0 chr10 59175964 59176094 -81140671 - MER94 DNA DNA -4 130 1 1994 145 3 3 chr10 59179098 59179395 -81137370 - AluSx SINE Alu -15 297 1 27 77 0 22 chr10 59179400 59179427 -81137338 + AT_rich Low_complexity Low_complexity 1 27 -62 1743 111 11 48 chr10 59179427 59179698 -81137067 - AluSx SINE Alu -36 276 16 27 77 0 22 chr10 59179698 59179761 -81137004 + AT_rich Low_complexity Low_complexity 27 89 0 961 135 0 0 chr10 59179778 59179919 -81136846 - AluJb SINE Alu -171 141 1 247 333 0 0 chr10 59180169 59180244 -81136521 - MIR3 SINE MIR -48 160 86 257 314 97 40 chr10 59180338 59180462 -81136303 - MER5A DNA MER1_type -24 165 35 448 321 184 32 chr10 59181949 59182502 -81134263 - L2 LINE L2 0 3313 2652 4601 158 22 12 chr10 59182906 59183807 -81132958 + L1MC1 LINE L1 5197 6104 -229 561 150 31 63 chr10 59183826 59183953 -81132812 + L1MC1 LINE L1 6210 6332 -1 345 320 108 30 chr10 59184382 59184585 -81132180 - MIR SINE MIR -16 246 28 1093 193 24 0 chr10 59184925 59185137 -81131628 + MER20 DNA MER1_type 3 219 0 1167 96 42 12 chr10 59185920 59186086 -81130679 + AluSg/x SINE Alu 132 302 -10 250 278 11 11 chr10 59187166 59187256 -81129509 + GA-rich Low_complexity Low_complexity 2 91 0 397 243 130 65 chr10 59188543 59188840 -81127925 - L1MB7 LINE L1 -325 5859 5535 1866 185 43 3 chr10 59189111 59189462 -81127303 - MLT1A1 LTR MaLR 0 365 1 248 235 0 24 chr10 59189740 59189825 -81126940 + (CGTG)n Simple_repeat Simple_repeat 1 83 0 280 327 96 40 chr10 59190261 59190460 -81126305 + L2 LINE L2 2872 3081 -191 779 63 16 56 chr10 59190504 59190630 -81126135 - Alu SINE Alu -13 298 178 974 301 49 10 chr10 59190925 59191331 -81125434 + MER90 LTR ERV1 150 571 -4 449 315 62 38 chr10 59192079 59192371 -81124394 + LTR16C LTR ERVL 191 489 -2 199 257 14 95 chr10 59194092 59194166 -81122599 + L2 LINE L2 3237 3304 -9 180 377 123 34 chr10 59194263 59194826 -81121939 - L2 LINE L2 -1894 1420 808 309 89 0 0 chr10 59195370 59195415 -81121350 + (TG)n Simple_repeat Simple_repeat 2 46 0 244 296 143 48 chr10 59197279 59197468 -81119297 - MIR SINE MIR -13 249 43 26 64 0 0 chr10 59198181 59198228 -81118537 + AT_rich Low_complexity Low_complexity 1 47 0 1891 179 0 0 chr10 59198300 59198596 -81118169 + AluJb SINE Alu 1 296 -16 9938 134 27 19 chr10 59198772 59200525 -81116240 - Tigger1 DNA MER2_type 0 2418 653 2187 170 27 5 chr10 59200528 59200939 -81115826 - MSTA LTR MaLR -7 421 2 6958 169 66 51 chr10 59200939 59202494 -81114271 - MSTA-int LTR MaLR 0 1580 3 2151 158 22 69 chr10 59202496 59202945 -81113820 - MSTA LTR MaLR 0 428 1 2991 117 9 193 chr10 59202945 59203371 -81113394 - Tigger1 DNA MER2_type -1761 657 154 573 15 0 0 chr10 59203371 59203437 -81113328 + (TA)n Simple_repeat Simple_repeat 1 66 0 2991 117 9 193 chr10 59203437 59203494 -81113271 - Tigger1 DNA MER2_type -2264 154 88 1970 148 0 3 chr10 59203494 59203778 -81112987 + AluJb SINE Alu 1 283 -29 2991 117 9 193 chr10 59203778 59204098 -81112667 - Tigger1 DNA MER2_type -2330 88 1 267 254 14 42 chr10 59204220 59204291 -81112474 + L2 LINE L2 3245 3313 0 507 233 23 62 chr10 59204817 59204993 -81111772 + MIR SINE MIR 3 171 -91 182 323 32 0 chr10 59206835 59206928 -81109837 + L2 LINE L2 2313 2408 -906 225 0 0 0 chr10 59207919 59207944 -81108821 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 13671 34 5 0 chr10 59208095 59210510 -81106255 - L1PA4 LINE L1 -4 6151 3720 24 0 0 0 chr10 59210780 59210804 -81105961 + AT_rich Low_complexity Low_complexity 1 24 0 535 281 129 14 chr10 59210985 59211195 -81105570 + MIR SINE MIR 29 262 0 342 248 150 9 chr10 59211708 59211821 -81104944 - L2 LINE L2 -181 3091 2963 343 273 8 23 chr10 59212423 59212551 -81104214 + MER103 DNA DNA 8 133 -33 231 279 105 12 chr10 59212629 59212715 -81104050 - MIR SINE MIR -96 166 73 202 270 66 124 chr10 59212778 59213004 -81103761 - L2 LINE L2 -816 2498 2286 2217 128 0 0 chr10 59213427 59213733 -81103032 - AluSx SINE Alu -6 306 1 183 80 0 0 chr10 59214763 59214788 -81101977 + (T)n Simple_repeat Simple_repeat 1 25 0 36 40 0 0 chr10 59215516 59215566 -81101199 + AT_rich Low_complexity Low_complexity 1 50 0 607 250 61 6 chr10 59216213 59216377 -81100388 + MIR SINE MIR 15 187 -75 1368 175 110 98 chr10 59216394 59216886 -81099879 - MLT1D LTR MaLR -1 504 7 882 124 51 17 chr10 59218472 59218650 -81098115 - L1MA7 LINE L1 -2 6289 6106 1105 207 9 9 chr10 59218801 59219014 -81097751 + MER58A DNA MER1_type 1 213 -11 436 284 45 0 chr10 59219194 59219328 -81097437 - L2 LINE L2 -24 3289 3150 239 340 30 10 chr10 59219583 59219683 -81097082 + MIR SINE MIR 16 117 -91 618 236 127 18 chr10 59219707 59219872 -81096893 - MER5A DNA MER1_type 0 189 7 505 169 130 19 chr10 59221342 59221496 -81095269 - HsTC2 DNA Tc2 0 1898 1728 320 271 131 0 chr10 59221541 59221648 -81095117 - HsTC2 DNA Tc2 -1776 122 2 22 56 0 0 chr10 59222390 59222426 -81094339 + AT_rich Low_complexity Low_complexity 1 36 0 267 227 92 71 chr10 59223777 59223918 -81092847 - MLT1L LTR MaLR -20 595 452 1519 193 3 25 chr10 59224146 59224462 -81092303 - AluJo SINE Alu 0 312 3 347 221 89 9 chr10 59224466 59224596 -81092169 - L1P LINE L1 -1121 5025 4887 228 35 0 0 chr10 59224673 59224702 -81092063 + (CA)n Simple_repeat Simple_repeat 2 30 0 267 31 0 0 chr10 59225749 59225781 -81090984 + (TG)n Simple_repeat Simple_repeat 2 33 0 198 143 0 0 chr10 59226663 59226698 -81090067 + (T)n Simple_repeat Simple_repeat 1 35 0 288 0 0 0 chr10 59227622 59227654 -81089111 + (T)n Simple_repeat Simple_repeat 1 32 0 2116 127 0 0 chr10 59229927 59230255 -81086510 - AluSx SINE Alu 0 328 1 2499 65 3 0 chr10 59230673 59230983 -81085782 + AluY SINE Alu 1 311 0 1590 184 61 15 chr10 59231584 59231976 -81084789 - LTR37A LTR ERV1 -2 424 15 1046 103 0 45 chr10 59231997 59232153 -81084612 - AluSq/x SINE Alu -163 149 1 21 0 0 0 chr10 59232674 59232695 -81084070 + AT_rich Low_complexity Low_complexity 1 21 0 221 0 35 0 chr10 59233486 59233515 -81083250 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 26 30 0 0 chr10 59234245 59234278 -81082487 + AT_rich Low_complexity Low_complexity 1 33 0 206 265 0 0 chr10 59235082 59235131 -81081634 - MIR SINE MIR -95 167 119 189 107 0 0 chr10 59235617 59235645 -81081120 + (T)n Simple_repeat Simple_repeat 1 28 0 1485 114 129 20 chr10 59236061 59236352 -81080413 - AluSx SINE Alu 0 319 1 25 0 0 0 chr10 59236502 59236527 -81080238 + AT_rich Low_complexity Low_complexity 1 25 0 6067 237 74 36 chr10 59237532 59239932 -81076833 + L1M3c LINE L1 1 2190 -4020 2267 157 125 0 chr10 59239931 59240279 -81076486 + L1MA9 LINE L1 5790 6093 -219 * 270 81 0 0 chr10 59240279 59240316 -81076449 + (CA)n Simple_repeat Simple_repeat 2 38 0 2267 157 125 0 chr10 59240316 59240368 -81076397 + L1MA9 LINE L1 6093 6137 -175 276 30 0 0 chr10 59240368 59240401 -81076364 + (TG)n Simple_repeat Simple_repeat 2 34 0 198 0 0 0 chr10 59240400 59240422 -81076343 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 2267 157 125 0 chr10 59240401 59240484 -81076281 + L1MA9 LINE L1 6137 6311 -1 24 53 0 0 chr10 59241017 59241055 -81075710 + AT_rich Low_complexity Low_complexity 1 38 0 337 252 117 53 chr10 59241674 59241880 -81074885 + L3 LINE CR1 848 1066 -511 347 192 27 103 chr10 59241947 59242093 -81074672 - MIR SINE MIR -2 260 126 194 411 31 31 chr10 59242636 59242860 -81073905 - L2 LINE L2 -368 2946 2723 213 286 36 0 chr10 59243042 59243098 -81073667 + L2 LINE L2 3194 3251 -21 182 189 75 19 chr10 59243119 59243172 -81073593 + MIR3 SINE MIR 153 208 0 21 0 0 0 chr10 59243461 59243482 -81073283 + AT_rich Low_complexity Low_complexity 1 21 0 528 248 115 61 chr10 59244350 59244628 -81072137 - LTR33 LTR ERVL 0 521 229 279 228 134 34 chr10 59245483 59245632 -81071133 - L1ME4a LINE L1 -2 6119 5956 357 250 76 30 chr10 59245791 59245923 -81070842 - L1ME4a LINE L1 -716 5405 5268 240 167 0 0 chr10 59246086 59246122 -81070643 + Alu SINE Alu 1 36 -265 1211 122 0 47 chr10 59246232 59246446 -81070319 + AluSg/x SINE Alu 85 288 -24 28 0 0 0 chr10 59246447 59246475 -81070290 + AT_rich Low_complexity Low_complexity 1 28 0 2159 139 62 22 chr10 59246517 59246934 -81069831 - Tigger2a DNA MER2_type 0 434 1 240 353 20 0 chr10 59247832 59247934 -81068831 - MIR3 SINE MIR -48 160 57 235 98 0 0 chr10 59249020 59249061 -81067704 - Tigger2 DNA MER2_type -182 2536 2496 246 337 129 0 chr10 59249571 59249672 -81067093 - L2 LINE L2 0 3313 3200 552 331 105 27 chr10 59252176 59252548 -81064217 + L2 LINE L2 2913 3313 0 317 279 145 27 chr10 59252705 59252904 -81063861 + MIR SINE MIR 23 249 -13 29 28 0 0 chr10 59252910 59252946 -81063819 + AT_rich Low_complexity Low_complexity 1 36 0 245 227 0 13 chr10 59253530 59253605 -81063160 + (TA)n Simple_repeat Simple_repeat 1 74 0 369 271 271 44 chr10 59253883 59254064 -81062701 - MIR SINE MIR -5 257 36 200 211 0 19 chr10 59254119 59254171 -81062594 + CT-rich Low_complexity Low_complexity 3 53 0 190 337 54 48 chr10 59255719 59255885 -81060880 - L3 LINE CR1 -203 1374 1208 372 299 189 0 chr10 59256389 59256516 -81060249 - MER5A DNA MER1_type -30 159 9 22 35 0 0 chr10 59256712 59256741 -81060024 + AT_rich Low_complexity Low_complexity 1 29 0 1731 176 3 19 chr10 59257031 59257343 -81059422 + AluJo SINE Alu 1 307 -5 1750 140 12 0 chr10 59258775 59259025 -81057740 + AluSq SINE Alu 1 253 -60 197 65 32 0 chr10 59259031 59259062 -81057703 + (AAATG)n Simple_repeat Simple_repeat 4 35 0 2124 116 0 14 chr10 59259685 59259979 -81056786 + AluSg SINE Alu 1 290 -20 1906 168 3 3 chr10 59260013 59260322 -81056443 - AluSx SINE Alu -3 309 1 289 218 11 58 chr10 59260626 59260713 -81056052 + Charlie3 DNA MER1_type 1 83 -2627 1744 169 54 3 chr10 59261235 59261414 -81055351 - AluJb SINE Alu -2 310 109 300 27 0 0 chr10 59261414 59261451 -81055314 + (TG)n Simple_repeat Simple_repeat 2 38 0 1744 169 54 3 chr10 59261451 59261566 -81055199 - AluJb SINE Alu -203 109 1 441 234 17 120 chr10 59261820 59261995 -81054770 - MIR SINE MIR -55 207 51 1048 206 57 9 chr10 59262740 59262968 -81053797 + MER66B LTR ERV1 28 266 -220 1842 128 37 4 chr10 59262970 59263243 -81053522 + AluSx SINE Alu 3 284 -28 279 282 136 18 chr10 59264286 59264396 -81052369 - MIR SINE MIR -79 183 61 518 165 286 15 chr10 59264963 59265096 -81051669 + MER5A DNA MER1_type 21 189 0 1537 163 36 59 chr10 59265897 59266203 -81050562 - AluJb SINE Alu -13 299 1 2258 79 7 3 chr10 59266484 59266775 -81049990 + AluSq SINE Alu 2 293 -20 3588 47 0 7 chr10 59267269 59267720 -81049045 - LTR7 LTR ERV1 -2 448 1 2416 78 48 0 chr10 59267720 59268092 -81048673 - HERVH LTR ERV1 0 7713 7324 1296 128 18 14 chr10 59268092 59268311 -81048454 - HERVH LTR ERV1 -1894 5819 5600 4183 138 1 1 chr10 59268312 59268974 -81047791 - HERVH LTR ERV1 -2564 5149 4488 3203 113 0 6 chr10 59268976 59269481 -81047284 - HERVH LTR ERV1 -3720 3993 3492 919 127 7 0 chr10 59269471 59269621 -81047144 - HERVH LTR ERV1 -4423 3290 3140 * 18911 92 9 35 chr10 59269600 59272272 -81044493 - HERVH LTR ERV1 -4718 2995 408 4040 34 0 0 chr10 59272272 59272749 -81044016 - L1PA3 LINE L1 0 6155 5679 18911 92 9 35 chr10 59272749 59273148 -81043617 - HERVH LTR ERV1 -7305 408 1 3524 55 0 7 chr10 59273150 59273601 -81043164 - LTR7 LTR ERV1 -2 448 1 254 283 43 22 chr10 59275454 59275546 -81041219 + 7SK RNA RNA 5 98 -95 293 218 99 55 chr10 59275736 59275938 -81040827 + L1M4 LINE L1 5034 5244 -902 * 948 225 178 17 chr10 59275929 59276391 -81040374 - L1MEc LINE L1 -5324 1072 537 206 290 86 21 chr10 59276458 59276551 -81040214 - MER5B DNA MER1_type -79 99 1 404 281 78 24 chr10 59276556 59277172 -81039593 - L1ME LINE L1 -513 5720 5078 2002 156 0 16 chr10 59277736 59278050 -81038715 + AluJb SINE Alu 1 309 -3 298 276 168 88 chr10 59278688 59279028 -81037737 - L2 LINE L2 -2 3311 2945 377 327 83 6 chr10 59279650 59279806 -81036959 + HAL1 LINE L1 782 949 -1558 254 268 65 22 chr10 59279806 59279944 -81036821 + HAL1b LINE L1 748 891 -457 282 113 32 16 chr10 59280012 59280074 -81036691 + GA-rich Low_complexity Low_complexity 2 64 0 257 326 114 30 chr10 59281015 59281147 -81035618 + L2 LINE L2 3078 3220 -52 1190 268 74 44 chr10 59281261 59282211 -81034554 - L1MEc LINE L1 -2681 3534 2561 1929 142 22 19 chr10 59282211 59282522 -81034243 - AluSx SINE Alu 0 312 1 1190 268 74 44 chr10 59282522 59282953 -81033812 - L1MEc LINE L1 -3654 2561 2145 2296 75 7 3 chr10 59282957 59283250 -81033515 - AluY SINE Alu -17 294 1 300 325 75 33 chr10 59283283 59283523 -81033242 - L1MEc LINE L1 -4164 2051 1802 794 305 64 32 chr10 59283545 59284295 -81032470 - L1MEc LINE L1 -4608 1788 1015 596 246 131 63 chr10 59285275 59285392 -81031373 + MLT1G LTR MaLR 15 123 -432 3089 168 72 6 chr10 59285392 59286028 -81030737 - LTR58 LTR ERV1 -1 678 1 596 246 131 63 chr10 59286028 59286423 -81030342 + MLT1G LTR MaLR 123 555 0 990 251 110 72 chr10 59287468 59287997 -81028768 - MLT1H LTR MaLR 0 549 1 318 348 15 22 chr10 59288057 59288192 -81028573 - L2 LINE L2 -221 3051 2918 378 239 231 8 chr10 59288369 59288499 -81028266 + MIR SINE MIR 29 187 -75 306 0 0 0 chr10 59288923 59288957 -81027808 + (T)n Simple_repeat Simple_repeat 1 34 0 233 348 76 11 chr10 59289359 59289451 -81027314 - L2 LINE L2 -15 3298 3201 238 288 0 30 chr10 59289580 59289646 -81027119 + L2 LINE L2 3229 3292 -21 216 111 0 0 chr10 59289651 59289687 -81027078 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 1608 248 108 35 chr10 59289705 59290309 -81026456 + MER21B LTR ERV1 15 662 -201 180 0 0 0 chr10 59290309 59290329 -81026436 + (AATTG)n Simple_repeat Simple_repeat 1 20 0 261 260 132 28 chr10 59291023 59291273 -81025492 + L1ME4a LINE L1 5729 6004 -117 213 288 51 68 chr10 59292772 59292890 -81023875 - MER5A DNA MER1_type -22 167 52 231 232 0 54 chr10 59293488 59293544 -81023221 + MER5B DNA MER1_type 2 54 -124 240 193 0 35 chr10 59293913 59293970 -81022795 + (TA)n Simple_repeat Simple_repeat 1 55 0 291 259 0 0 chr10 59293971 59294056 -81022709 - L1MC4 LINE L1 -1341 6701 6617 2028 87 0 29 chr10 59294104 59294381 -81022384 + AluY SINE Alu 38 306 -5 304 217 11 43 chr10 59294381 59294463 -81022302 - L1MC4 LINE L1 -1347 6695 6615 * 315 244 22 22 chr10 59294422 59294512 -81022253 + L1MC4 LINE L1 6614 6703 -1339 270 0 0 0 chr10 59294513 59294561 -81022204 + (TG)n Simple_repeat Simple_repeat 1 78 0 270 0 0 0 chr10 59294561 59294591 -81022174 + (TG)n Simple_repeat Simple_repeat 2 31 0 1906 94 0 29 chr10 59294604 59294879 -81021886 - AluY SINE Alu -7 304 38 301 250 73 0 chr10 59294892 59294988 -81021777 - L1M4 LINE L1 -3670 2476 2374 5745 241 128 21 chr10 59295098 59295427 -81021338 - L1MD3 LINE L1 -8 7987 7694 2125 128 35 41 chr10 59295427 59295793 -81020972 + THE1B LTR MaLR 1 364 0 5745 241 128 21 chr10 59295793 59297580 -81019185 - L1MD3 LINE L1 -301 7694 5645 445 145 170 107 chr10 59297580 59297739 -81019026 - MLT2D LTR ERVL 0 414 246 844 170 0 0 chr10 59297739 59297880 -81018885 - ERVL LTR ERVL -1137 4627 4487 643 184 6 86 chr10 59297905 59297959 -81018806 - MLT2D LTR ERVL -2 412 355 2208 74 3 0 chr10 59297959 59298266 -81018499 - AluY SINE Alu 0 308 1 643 184 6 86 chr10 59298266 59298384 -81018381 - MLT2D LTR ERVL -59 355 253 214 254 36 18 chr10 59298484 59298539 -81018226 - MER5B DNA MER1_type -71 107 52 3528 204 109 83 chr10 59298539 59299255 -81017510 + L1MC3 LINE L1 6353 7049 -736 271 250 11 65 chr10 59299255 59299347 -81017418 + MLT1F1 LTR MaLR 36 122 -445 3528 204 109 83 chr10 59299347 59299930 -81016835 + L1MC3 LINE L1 7049 7778 -7 265 191 21 0 chr10 59300038 59300085 -81016680 - MER5B DNA MER1_type -129 49 2 189 0 0 0 chr10 59300504 59300525 -81016240 + (T)n Simple_repeat Simple_repeat 1 21 0 12953 186 33 15 chr10 59300573 59305377 -81011388 - L1MA5 LINE L1 0 7362 2445 3584 109 4 4 chr10 59305377 59305891 -81010874 - MER75 DNA T2_type 0 514 1 12953 186 33 15 chr10 59305891 59306633 -81010132 - L1MA5 LINE L1 -4917 2445 1717 359 330 155 17 chr10 59306707 59306946 -81009819 - L1MA5 LINE L1 -6445 764 493 344 284 11 11 chr10 59308302 59308390 -81008375 - L2 LINE L2 -1 3271 3184 359 238 80 60 chr10 59308758 59308909 -81007856 + MIR SINE MIR 67 220 -42 266 337 37 43 chr10 59308951 59309114 -81007651 + L3 LINE CR1 1405 1566 -11 221 333 158 17 chr10 59309218 59309395 -81007370 - MIR SINE MIR -14 248 47 207 0 0 0 chr10 59311112 59311135 -81005630 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1256 114 0 10 chr10 59311259 59311452 -81005313 - MLT2A1 LTR ERVL -253 191 1 590 271 54 73 chr10 59311471 59311881 -81004884 + L2 LINE L2 2805 3206 -107 1042 176 16 5 chr10 59311884 59312071 -81004694 - MLT1A1 LTR MaLR -176 189 1 300 268 22 120 chr10 59312109 59312292 -81004473 + MER102b DNA MER1_type 177 341 0 317 314 138 11 chr10 59313657 59313845 -81002920 + MIR SINE MIR 3 214 -48 246 333 111 0 chr10 59313925 59314033 -81002732 - L3 LINE CR1 -3 1574 1455 639 171 21 71 chr10 59314069 59314209 -81002556 - FLAM_C SINE Alu 0 133 1 345 259 115 35 chr10 59314273 59314431 -81002334 - MIR SINE MIR -74 188 19 401 81 16 0 chr10 59316175 59316237 -81000528 + (TC)n Simple_repeat Simple_repeat 2 64 0 237 132 0 0 chr10 59316553 59316591 -81000174 + (TTC)n Simple_repeat Simple_repeat 3 40 0 25 51 0 0 chr10 59318714 59318753 -80998012 + AT_rich Low_complexity Low_complexity 1 39 0 236 28 56 0 chr10 59319359 59319395 -80997370 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1659 260 51 101 chr10 59321925 59322710 -80994055 - L2 LINE L2 -421 2893 2148 2389 121 47 10 chr10 59323441 59323846 -80992919 + MSTA LTR MaLR 1 420 -8 1811 171 10 23 chr10 59324437 59324746 -80992019 - AluJo SINE Alu -7 305 1 2327 160 18 61 chr10 59325429 59325874 -80990891 + MSTB LTR MaLR 1 426 0 805 167 88 15 chr10 59326481 59326685 -80990080 + Charlie4 DNA MER1_type 1740 1958 -3 355 261 231 15 chr10 59326700 59326895 -80989870 - L1MEc LINE L1 -4725 1585 1349 561 274 98 10 chr10 59326940 59327246 -80989519 - L1MEc LINE L1 -4884 1235 903 262 222 61 15 chr10 59327402 59327482 -80989283 + MIR3 SINE MIR 76 162 -46 7435 254 25 16 chr10 59327661 59329724 -80987041 + L1PA12 LINE L1 1 2069 -5512 2300 112 0 0 chr10 59329774 59330079 -80986686 + AluSx SINE Alu 1 305 -7 225 360 0 0 chr10 59330093 59330168 -80986597 - MIR SINE MIR -167 95 21 466 289 0 53 chr10 59331157 59331344 -80985421 + AluJb SINE Alu 3 179 -133 1011 180 6 0 chr10 59331344 59331505 -80985260 + AluJo/FRAM SINE Alu 146 307 -5 508 219 139 0 chr10 59331741 59331892 -80984873 + MER96 DNA MER1_type? 4 175 0 780 317 56 42 chr10 59332619 59333048 -80983717 + LTR16A LTR ERVL 16 450 0 580 314 30 4 chr10 59333049 59333285 -80983480 + HERV16 LTR ERVL 2 243 -4753 627 240 34 11 chr10 59333286 59333461 -80983304 + MLT1G LTR MaLR 1 179 -411 458 196 226 8 chr10 59333597 59333730 -80983035 + MLT1G LTR MaLR 222 383 -207 1112 180 15 0 chr10 59333730 59333930 -80982835 - MER20 DNA MER1_type 0 219 17 341 257 9 111 chr10 59333950 59334097 -80982668 + MLT1G LTR MaLR 381 499 -91 2056 138 10 0 chr10 59334097 59334386 -80982379 + AluSx SINE Alu 4 295 -17 341 257 9 111 chr10 59334386 59334464 -80982301 + MLT1G LTR MaLR 499 583 -7 1657 303 91 43 chr10 59334528 59335561 -80981204 + HERV16 LTR ERVL 313 1395 -3601 253 226 0 0 chr10 59335773 59335826 -80980939 + L2 LINE L2 3218 3270 -2 465 147 9 26 chr10 59336988 59337104 -80979661 + GA-rich Low_complexity Low_complexity 3 116 0 698 263 67 42 chr10 59339296 59339653 -80977112 - L1ME LINE L1 -378 5743 5378 559 317 139 4 chr10 59339822 59340052 -80976713 - MIR SINE MIR 0 262 2 1973 143 3 17 chr10 59340245 59340545 -80976220 + AluSx SINE Alu 1 296 -16 2081 117 3 19 chr10 59340554 59340863 -80975902 + AluSx SINE Alu 1 304 -8 2270 65 0 14 chr10 59342006 59342299 -80974466 + AluY SINE Alu 7 295 -16 452 261 82 23 chr10 59343598 59343750 -80973015 - MIR SINE MIR -65 143 7 182 324 29 0 chr10 59344824 59344892 -80971873 + L2 LINE L2 2592 2661 -653 1241 300 91 5 chr10 59344952 59345392 -80971373 + L2 LINE L2 2829 3306 -7 663 275 110 4 chr10 59345508 59345875 -80970890 + LTR16C LTR ERVL 37 482 -9 21 0 0 0 chr10 59345999 59346020 -80970745 + AT_rich Low_complexity Low_complexity 1 21 0 183 318 32 16 chr10 59346191 59346254 -80970511 + MER5B DNA MER1_type 95 158 -20 1805 214 60 11 chr10 59346576 59347124 -80969641 + L1M4 LINE L1 4759 5333 -813 291 97 2 0 chr10 59347221 59347271 -80969494 - MSTA LTR MaLR -114 318 259 1321 249 48 19 chr10 59347305 59347986 -80968779 + L1ME LINE L1 4941 5646 -520 595 141 0 0 chr10 59347986 59348078 -80968687 + MLT2D LTR ERVL 1 92 -322 520 314 94 72 chr10 59348197 59348375 -80968390 - L2 LINE L2 -876 2438 2266 2416 107 3 0 chr10 59348375 59348685 -80968080 - AluSx SINE Alu -1 311 1 520 314 94 72 chr10 59348685 59348993 -80967772 - L2 LINE L2 -1048 2266 1941 200 311 49 0 chr10 59350189 59350250 -80966515 - L2 LINE L2 0 3272 3209 * 334 269 0 43 chr10 59350246 59350339 -80966426 + L2 LINE L2 3184 3272 0 1719 156 0 49 chr10 59350406 59350714 -80966051 + AluJo SINE Alu 1 293 -19 802 193 6 9 chr10 59351729 59351923 -80964842 - MER33 DNA MER1_type -251 73 1 279 231 52 67 chr10 59351939 59352073 -80964692 - MER94 DNA DNA -1 133 2 301 308 0 53 chr10 59352173 59352306 -80964459 + L2 LINE L2 2052 2177 -1137 450 0 0 0 chr10 59352653 59352703 -80964062 + (TG)n Simple_repeat Simple_repeat 1 50 0 1006 179 77 0 chr10 59354947 59355142 -80961623 + MER58A DNA MER1_type 1 210 -14 327 180 30 22 chr10 59355599 59355680 -80961085 - MIR SINE MIR -122 86 8 309 299 121 35 chr10 59357662 59357836 -80958929 + MIR3 SINE MIR 16 204 -4 24 0 0 0 chr10 59358360 59358384 -80958381 + AT_rich Low_complexity Low_complexity 1 24 0 431 251 154 23 chr10 59360129 59360304 -80956461 + MIR SINE MIR 65 262 0 15301 135 43 18 chr10 59361159 59362377 -80954388 + Tigger2 DNA MER2_type 1 1187 -1531 2299 92 6 25 chr10 59362377 59362693 -80954072 + AluY SINE Alu 1 310 -1 15301 135 43 18 chr10 59362693 59364126 -80952639 + Tigger2 DNA MER2_type 1187 2718 0 279 0 0 0 chr10 59365099 59365130 -80951635 + (T)n Simple_repeat Simple_repeat 1 31 0 198 0 0 0 chr10 59367415 59367437 -80949328 + (T)n Simple_repeat Simple_repeat 1 22 0 23 33 0 0 chr10 59368008 59368038 -80948727 + AT_rich Low_complexity Low_complexity 1 30 0 278 223 146 10 chr10 59368040 59368143 -80948622 - L2 LINE L2 -5 3308 3192 2010 147 7 3 chr10 59368287 59368587 -80948178 + AluSx SINE Alu 1 301 -11 363 293 131 14 chr10 59368792 59369014 -80947751 + MARNA DNA Mariner 294 541 -45 399 306 100 0 chr10 59369296 59369456 -80947309 + MIR SINE MIR 87 262 0 1534 188 3 37 chr10 59370700 59370998 -80945767 + AluJo SINE Alu 1 288 -24 27 0 0 0 chr10 59371555 59371582 -80945183 + AT_rich Low_complexity Low_complexity 1 27 0 392 220 88 0 chr10 59371713 59371804 -80944961 - MER5C DNA MER1_type -1 323 225 362 194 45 119 chr10 59371813 59371947 -80944818 - MER5C DNA MER1_type -200 124 1 2196 75 24 20 chr10 59372584 59372879 -80943886 + AluY SINE Alu 4 299 -12 746 216 16 54 chr10 59374342 59374527 -80942238 + MER45A DNA AcHobo 1 178 0 1803 134 22 75 chr10 59375244 59375564 -80941201 + AluJo SINE Alu 2 304 -8 410 247 0 0 chr10 59375890 59375983 -80940782 - MIR SINE MIR -10 252 160 1285 273 153 6 chr10 59375984 59376486 -80940279 - MLT1K LTR MaLR 0 588 13 409 350 12 12 chr10 59376506 59376669 -80940096 - MIR SINE MIR -98 164 2 496 337 11 11 chr10 59377359 59377546 -80939219 + MIR SINE MIR 70 256 -6 693 197 98 5 chr10 59377715 59377908 -80938857 - MER90 LTR ERV1 -5 609 399 187 284 174 18 chr10 59378356 59378465 -80938300 - L3b LINE CR1 -135 1448 1323 1475 182 30 61 chr10 59379947 59380244 -80936521 + AluJo SINE Alu 1 288 -24 257 365 68 20 chr10 59382198 59382523 -80934242 + L2 LINE L2 2752 3090 -182 203 256 39 90 chr10 59383226 59383304 -80933461 + MIR3 SINE MIR 10 83 -125 239 330 11 11 chr10 59383483 59383574 -80933191 - L2 LINE L2 -1 3312 3222 1982 192 78 2 chr10 59383578 59383974 -80932791 + MSTB LTR MaLR 1 426 0 630 249 16 36 chr10 59384002 59384195 -80932570 + MIR SINE MIR 63 251 -11 271 327 48 10 chr10 59384620 59384724 -80932041 - MIR SINE MIR -81 127 20 2103 102 42 0 chr10 59385097 59385380 -80931385 + AluSx SINE Alu 1 295 -17 1313 193 9 120 chr10 59385462 59385865 -80930900 + L1MC1 LINE L1 4741 5063 -1083 813 94 17 0 chr10 59385865 59385982 -80930783 - L1PA11 LINE L1 -11 6163 6045 1313 193 9 120 chr10 59385982 59386153 -80930612 + L1MC1 LINE L1 5063 5251 -895 1556 151 88 22 chr10 59386153 59386470 -80930295 + MER1B DNA MER1_type 1 338 -1 5976 120 15 54 chr10 59386471 59386741 -80930024 + L1MC1 LINE L1 5244 5523 -810 1073 192 22 134 chr10 59386741 59387152 -80929613 + MLT1A1 LTR MaLR 1 365 0 5976 120 15 54 chr10 59387152 59387690 -80929075 + L1MC1 LINE L1 5523 5998 -335 1719 129 0 0 chr10 59387690 59387931 -80928834 + AluSx SINE Alu 61 301 -11 5976 120 15 54 chr10 59387931 59388255 -80928510 + L1MC1 LINE L1 5998 6333 0 28 48 0 0 chr10 59388470 59388512 -80928253 + AT_rich Low_complexity Low_complexity 1 42 0 211 298 137 16 chr10 59388549 59388673 -80928092 - L2 LINE L2 -225 3047 2909 1758 156 15 12 chr10 59389317 59389656 -80927109 - L1MA4 LINE L1 -7 6293 5954 841 169 11 45 chr10 59389779 59389956 -80926809 - MER20 DNA MER1_type 0 219 49 385 238 99 0 chr10 59390019 59390191 -80926574 - L1ME LINE L1 -374 5747 5559 194 176 0 59 chr10 59390252 59390303 -80926462 + L2 LINE L2 3266 3313 0 448 265 34 0 chr10 59391014 59391131 -80925634 + MIR SINE MIR 17 137 -125 573 191 0 0 chr10 59391136 59391251 -80925514 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 6090 120 13 8 chr10 59391253 59392458 -80924307 - L1MA1 LINE L1 -85 6217 5006 551 264 115 0 chr10 59392533 59392681 -80924084 + MIR SINE MIR 65 229 -33 510 316 151 5 chr10 59394508 59394720 -80922045 + MIR SINE MIR 20 262 0 698 263 67 42 chr10 59394889 59395246 -80921519 + L1ME LINE L1 5378 5743 -378 378 239 231 8 chr10 59397653 59397783 -80918982 - MIR SINE MIR -75 187 29 318 348 15 22 chr10 59397959 59398094 -80918671 + L2 LINE L2 2918 3051 -221 990 251 110 72 chr10 59398154 59398683 -80918082 + MLT1H LTR MaLR 1 549 0 596 246 131 65 chr10 59399728 59400123 -80916642 - MLT1G LTR MaLR 0 555 123 3089 168 72 6 chr10 59400123 59400759 -80916006 + LTR58 LTR ERV1 1 678 -1 596 246 131 65 chr10 59400759 59400876 -80915889 - MLT1G LTR MaLR -432 123 15 794 305 64 32 chr10 59401856 59402606 -80914159 + L1MEc LINE L1 1015 1788 -4608 300 325 75 33 chr10 59402628 59402868 -80913897 + L1MEc LINE L1 1802 2051 -4164 2296 75 7 3 chr10 59402901 59403194 -80913571 + AluY SINE Alu 1 294 -17 1190 268 74 44 chr10 59403198 59403629 -80913136 + L1MEc LINE L1 2145 2561 -3654 1929 142 22 19 chr10 59403629 59403940 -80912825 + AluSx SINE Alu 1 312 0 1190 268 74 44 chr10 59403940 59404890 -80911875 + L1MEc LINE L1 2561 3534 -2681 404 327 67 79 chr10 59405004 59405395 -80911370 - L2 LINE L2 -52 3220 2835 1600 154 0 0 chr10 59405501 59405735 -80911030 + AluSx SINE Alu 1 234 -78 227 290 48 0 chr10 59407078 59407140 -80909625 - L2 LINE L2 -2 3311 3247 288 164 27 127 chr10 59407255 59407365 -80909400 - MER103 DNA DNA -66 100 2 543 212 0 53 chr10 59408299 59408431 -80908334 + Tigger7 DNA MER2_type 4 128 -2359 1440 160 44 35 chr10 59408432 59408750 -80908015 + Tigger7 DNA MER2_type 2267 2587 0 284 289 59 128 chr10 59409103 59409290 -80907475 - L2 LINE L2 -190 3082 2909 2118 198 55 34 chr10 59409340 59409835 -80906930 - MLT1D LTR MaLR 0 505 1 25 31 0 0 chr10 59410289 59410321 -80906444 + AT_rich Low_complexity Low_complexity 1 32 0 2260 101 0 3 chr10 59410357 59410654 -80906111 - AluSc SINE Alu -13 296 1 390 296 37 15 chr10 59410815 59410950 -80905815 - MIR3 SINE MIR -48 160 23 788 354 90 25 chr10 59412056 59412841 -80903924 - L2 LINE L2 -1604 1710 875 233 180 60 0 chr10 59412853 59412903 -80903862 - LTR45 LTR ERV1 -347 178 126 268 263 62 0 chr10 59412930 59413010 -80903755 - L2 LINE L2 -2548 766 682 197 326 147 16 chr10 59413069 59413198 -80903567 - L2 LINE L2 -2801 513 368 230 185 111 0 chr10 59413206 59413260 -80903505 + MIR SINE MIR 133 192 -70 21 0 0 0 chr10 59413280 59413301 -80903464 + AT_rich Low_complexity Low_complexity 1 21 0 703 272 87 0 chr10 59413334 59413540 -80903225 - MIR SINE MIR -28 234 11 22 0 0 0 chr10 59415118 59415140 -80901625 + AT_rich Low_complexity Low_complexity 1 22 0 348 324 23 6 chr10 59415675 59415835 -80900930 + MIR3 SINE MIR 20 186 -22 521 326 69 60 chr10 59416190 59416623 -80900142 - L2 LINE L2 0 3272 2836 1482 104 59 0 chr10 59416765 59416967 -80899798 + AluSc SINE Alu 85 298 -11 2642 91 19 3 chr10 59417016 59417378 -80899387 - MER39 LTR ERV1 0 707 340 4356 148 7 24 chr10 59417383 59418092 -80898673 + MER50 LTR ERV1 1 697 -37 1242 160 63 48 chr10 59418115 59418383 -80898382 - MER39 LTR ERV1 -433 274 3 180 0 0 0 chr10 59422458 59422478 -80894287 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 228 261 153 0 chr10 59422505 59422616 -80894149 - L1MC4 LINE L1 -1 8041 7914 1799 210 100 15 chr10 59422699 59423209 -80893556 - L1ME2 LINE L1 -20 6144 5667 641 305 37 34 chr10 59423205 59423500 -80893265 - L1MC4a LINE L1 -136 7672 7377 * 1789 221 107 28 chr10 59423519 59423588 -80893177 + MLT1F LTR MaLR 10 72 -470 3678 153 8 52 chr10 59423588 59424228 -80892537 + LTR9 LTR ERV1 1 612 0 1789 221 107 28 chr10 59424228 59424652 -80892113 + MLT1F LTR MaLR 72 542 0 1234 263 92 20 chr10 59424652 59425161 -80891604 - L1MC4 LINE L1 -591 7451 6906 470 178 22 111 chr10 59425270 59425405 -80891360 - L2 LINE L2 -4 3309 3187 1020 232 38 0 chr10 59426151 59426362 -80890403 + MER20 DNA MER1_type 1 219 0 208 228 70 35 chr10 59427305 59427362 -80889403 + L2 LINE L2 3250 3308 -5 1391 225 110 48 chr10 59427414 59427504 -80889261 - MER34B LTR ERV1 -3 562 479 195 42 0 0 chr10 59427504 59427528 -80889237 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1391 225 110 48 chr10 59427528 59427957 -80888808 - MER34B LTR ERV1 -86 479 11 200 228 120 84 chr10 59428206 59428373 -80888392 + L2 LINE L2 2830 3002 -270 682 226 126 6 chr10 59428393 59428552 -80888213 + MER5B DNA MER1_type 1 178 0 424 200 17 113 chr10 59428589 59428704 -80888061 - MER5A DNA MER1_type -77 112 9 1013 191 11 21 chr10 59428736 59428925 -80887840 + MER5A DNA MER1_type 1 187 -2 394 286 83 83 chr10 59428925 59429165 -80887600 + L2 LINE L2 3032 3271 -1 539 266 34 51 chr10 59429852 59430029 -80886736 + MER5B DNA MER1_type 5 178 0 22 56 0 0 chr10 59430498 59430534 -80886231 + AT_rich Low_complexity Low_complexity 1 36 0 467 306 50 6 chr10 59432017 59432197 -80884568 + MER117 DNA MER1_type 1 188 -9 1894 189 175 25 chr10 59432881 59433147 -80883618 + MLT1D LTR MaLR 1 226 -279 2387 137 6 6 chr10 59433147 59433484 -80883281 - MER1B DNA MER1_type 0 337 1 1894 189 175 25 chr10 59433484 59433656 -80883109 + MLT1D LTR MaLR 226 505 0 1482 215 34 0 chr10 59434038 59434336 -80882429 - AluJo SINE Alu -4 308 1 323 302 32 63 chr10 59434517 59434643 -80882122 + L2 LINE L2 3151 3272 0 301 222 50 10 chr10 59434806 59434905 -80881860 + L1ME4a LINE L1 6018 6120 -1 620 241 108 22 chr10 59435072 59435304 -80881461 + MIR SINE MIR 11 262 0 379 282 0 0 chr10 59435473 59435576 -80881189 + MIR3 SINE MIR 105 207 -1 191 103 26 0 chr10 59436509 59436548 -80880217 + (CAA)n Simple_repeat Simple_repeat 1 40 0 306 247 25 0 chr10 59437049 59437130 -80879635 + MIR SINE MIR 89 171 -91 1737 169 72 77 chr10 59437133 59437337 -80879428 - MER31B LTR ERV1 0 543 340 5793 137 13 18 chr10 59437337 59437653 -80879112 + MER4D LTR ERV1 1 317 -586 2205 124 3 3 chr10 59437653 59437960 -80878805 - AluSx SINE Alu -5 307 1 5793 137 13 18 chr10 59437960 59438550 -80878215 + MER4D LTR ERV1 317 903 0 1737 169 72 77 chr10 59438550 59438813 -80877952 - MER31B LTR ERV1 -203 340 1 1695 144 13 7 chr10 59438946 59439245 -80877520 - L1 LINE L1 -787 5359 5059 1335 163 19 27 chr10 59439251 59439509 -80877256 + AluJb SINE Alu 1 256 -56 492 224 20 0 chr10 59439510 59439608 -80877157 + AluJb SINE Alu 208 307 -5 3810 127 129 78 chr10 59439663 59440531 -80876234 + L1MA9 LINE L1 5369 6280 -32 741 265 32 116 chr10 59440551 59440627 -80876138 - L2 LINE L2 0 3313 3232 1323 207 37 70 chr10 59440627 59440926 -80875839 - AluJb SINE Alu -13 289 1 741 265 32 116 chr10 59440926 59441227 -80875538 - L2 LINE L2 -81 3232 2968 227 208 102 188 chr10 59441373 59441451 -80875314 - MIR SINE MIR -6 256 173 2105 128 3 82 chr10 59441451 59441817 -80874948 - MER1B DNA MER1_type 0 337 1 227 208 102 188 chr10 59441817 59441935 -80874830 - MIR SINE MIR -89 173 77 567 240 0 0 chr10 59442412 59442512 -80874253 + FLAM_A SINE Alu 2 101 -41 246 288 115 36 chr10 59442669 59442808 -80873957 - MIR SINE MIR -93 169 20 207 279 62 93 chr10 59444494 59444655 -80872110 + MIR SINE MIR 101 256 -6 352 331 44 6 chr10 59444928 59445109 -80871656 - MER117 DNA MER1_type -9 188 1 298 329 6 47 chr10 59445326 59445496 -80871269 - MIR SINE MIR -73 189 27 673 335 61 45 chr10 59446106 59446415 -80870350 + L1MC/D LINE L1 4297 4599 -1547 2028 141 0 7 chr10 59446415 59446713 -80870052 - AluSx SINE Alu -11 301 6 673 335 61 45 chr10 59446713 59447008 -80869757 + L1MC/D LINE L1 4599 4911 -1235 352 0 42 0 chr10 59447067 59447115 -80869650 + (TG)n Simple_repeat Simple_repeat 2 51 0 189 0 0 0 chr10 59447120 59447141 -80869624 + (GA)n Simple_repeat Simple_repeat 1 21 0 949 201 67 14 chr10 59447163 59447372 -80869393 - AluJo SINE Alu -92 220 1 1231 280 57 18 chr10 59447575 59448082 -80868683 + L1MC/D LINE L1 5290 5816 -1992 556 263 6 29 chr10 59448767 59448942 -80867823 - MER5B DNA MER1_type -4 174 4 260 336 88 18 chr10 59449170 59449283 -80867482 + MER5A DNA MER1_type 62 182 -7 540 206 55 48 chr10 59449530 59449658 -80867107 - MLT1C LTR MaLR -294 173 42 3565 143 132 11 chr10 59449658 59450289 -80866476 - MER39 LTR ERV1 0 707 1 540 206 55 48 chr10 59450289 59450325 -80866440 - MLT1C LTR MaLR -425 42 8 222 37 0 0 chr10 59451985 59452012 -80864753 + (TG)n Simple_repeat Simple_repeat 2 28 0 1729 160 176 30 chr10 59452073 59452442 -80864323 + MSTA LTR MaLR 1 423 -5 9457 140 26 35 chr10 59452466 59454052 -80862713 + MSTA-int LTR MaLR 9 1580 0 1770 143 188 53 chr10 59454052 59454383 -80862382 + MSTA LTR MaLR 1 390 -38 2420 61 7 0 chr10 59454383 59454678 -80862087 - AluY SINE Alu -14 297 1 1770 143 188 53 chr10 59454678 59454723 -80862042 + MSTA LTR MaLR 390 428 0 481 290 95 36 chr10 59455383 59455604 -80861161 + MIR SINE MIR 19 252 -10 232 242 16 16 chr10 59455685 59455747 -80861018 - MIR SINE MIR -115 93 32 249 286 20 31 chr10 59457647 59457745 -80859020 + L2 LINE L2 3180 3276 -37 367 323 44 19 chr10 59457809 59457967 -80858798 - MIR SINE MIR -73 189 28 557 265 25 14 chr10 59457967 59458126 -80858639 - MER58A DNA MER1_type 0 158 12 223 298 135 10 chr10 59458242 59458346 -80858419 - MIR3 SINE MIR -54 154 38 1162 95 16 42 chr10 59459351 59459540 -80857225 + L1MB2 LINE L1 5987 6170 -1 291 261 171 11 chr10 59459554 59459730 -80857035 + MIR SINE MIR 52 255 -7 491 183 200 17 chr10 59460082 59460202 -80856563 - MER5A DNA MER1_type 0 189 48 22 35 0 0 chr10 59461002 59461031 -80855734 + AT_rich Low_complexity Low_complexity 1 29 0 2532 77 0 13 chr10 59461681 59461994 -80854771 + AluSc SINE Alu 1 309 0 324 262 84 9 chr10 59462973 59463080 -80853685 - MIR3 SINE MIR -15 193 79 1141 238 47 59 chr10 59463132 59463472 -80853293 + MLT1H LTR MaLR 1 336 -213 254 116 58 43 chr10 59463552 59463621 -80853144 + MLT1H LTR MaLR 505 574 -16 807 264 54 0 chr10 59463940 59464107 -80852658 - MER45A DNA AcHobo 0 178 3 2142 106 0 3 chr10 59465610 59465893 -80850872 + AluSc SINE Alu 1 282 -27 1071 162 0 6 chr10 59467806 59467973 -80848792 - FRAM SINE Alu -11 165 1 212 122 82 0 chr10 59468137 59468186 -80848579 + T-rich Low_complexity Low_complexity 3 55 0 460 311 91 18 chr10 59468377 59468596 -80848169 - MIR SINE MIR 0 262 28 1943 136 7 0 chr10 59468598 59468906 -80847859 - AluSx SINE Alu 0 310 1 204 40 0 0 chr10 59470307 59470332 -80846433 + (CA)n Simple_repeat Simple_repeat 2 26 0 280 239 15 15 chr10 59470707 59470774 -80845991 + MLT1K LTR MaLR 26 92 -496 * 847 278 93 24 chr10 59470770 59471104 -80845661 + MLT1K LTR MaLR 226 582 -6 2084 130 10 0 chr10 59471104 59471405 -80845360 + AluSx SINE Alu 1 304 -8 185 171 57 0 chr10 59472598 59472633 -80844132 - L2 LINE L2 -14 3299 3263 * 255 260 146 0 chr10 59472604 59472700 -80844065 - MIR SINE MIR -16 246 137 225 214 0 0 chr10 59472703 59472745 -80844020 + T-rich Low_complexity Low_complexity 1 42 0 1024 194 12 0 chr10 59472746 59472916 -80843849 - FAM SINE Alu -3 172 1 219 328 15 0 chr10 59472920 59472987 -80843778 - MIR SINE MIR -63 145 78 182 361 41 57 chr10 59473325 59473519 -80843246 + L2 LINE L2 2854 3044 -228 392 338 63 0 chr10 59473658 59473800 -80842965 + L2 LINE L2 3116 3266 -6 407 215 37 126 chr10 59474043 59474257 -80842508 + MER112 DNA MER1_type 35 229 -31 550 271 164 0 chr10 59474279 59474486 -80842279 + MIR SINE MIR 20 260 -2 496 310 32 19 chr10 59474531 59474689 -80842076 - MIR SINE MIR -78 184 25 2237 121 3 0 chr10 59474690 59474997 -80841768 - AluSx SINE Alu -4 308 1 397 291 60 33 chr10 59475127 59475309 -80841456 + MIR SINE MIR 14 200 -62 213 288 51 0 chr10 59476477 59476536 -80840229 + MIR3 SINE MIR 8 69 -139 281 344 46 8 chr10 59476905 59477036 -80839729 - MIR SINE MIR -66 196 61 597 94 0 12 chr10 59477058 59477143 -80839622 - LTR23 LTR ERV1 -34 403 320 2157 93 0 0 chr10 59477567 59477875 -80838890 + AluSx SINE Alu 15 322 0 379 254 90 30 chr10 59477884 59478018 -80838747 + L1ME3 LINE L1 6021 6162 0 1275 318 35 28 chr10 59478842 59479383 -80837382 - MLT1K LTR MaLR -31 557 13 183 80 0 0 chr10 59479785 59479810 -80836955 + (T)n Simple_repeat Simple_repeat 1 25 0 207 176 0 0 chr10 59479816 59479850 -80836915 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1504 143 0 5 chr10 59480180 59480403 -80836362 - MLT1D LTR MaLR 0 505 284 6746 75 10 7 chr10 59480428 59481323 -80835442 - L1MA1 LINE L1 -5 6297 5400 311 208 167 14 chr10 59481393 59481465 -80835300 + MIR SINE MIR 26 108 -154 581 309 106 9 chr10 59481528 59481745 -80835020 - MIR SINE MIR -21 241 4 22 0 0 0 chr10 59482504 59482526 -80834239 + AT_rich Low_complexity Low_complexity 1 22 0 339 267 158 17 chr10 59483648 59483768 -80832997 - MIR SINE MIR -122 140 4 258 242 15 0 chr10 59484755 59484821 -80831944 + (TA)n Simple_repeat Simple_repeat 1 67 0 206 214 0 0 chr10 59484855 59484897 -80831868 + (CA)n Simple_repeat Simple_repeat 1 42 0 333 246 112 35 chr10 59486043 59486238 -80830527 - MIR SINE MIR -41 221 4 2643 202 24 2 chr10 59488272 59488807 -80827958 + L1MB4 LINE L1 5628 6174 -6 338 262 48 63 chr10 59488988 59489087 -80827678 - MIR SINE MIR -12 250 152 4368 129 34 79 chr10 59489087 59489909 -80826856 + LTR1 LTR ERV1 1 785 0 338 262 48 63 chr10 59489909 59489935 -80826830 - MIR SINE MIR -110 152 127 1557 188 51 0 chr10 59490019 59490191 -80826574 - AluJb SINE Alu -4 308 113 369 0 0 0 chr10 59490191 59490232 -80826533 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1557 188 51 0 chr10 59490232 59490352 -80826413 - AluJb SINE Alu -199 113 1 283 268 30 35 chr10 59490400 59490500 -80826265 + MER5B DNA MER1_type 64 152 -26 4382 192 34 9 chr10 59490503 59491920 -80824845 + L1MB7 LINE L1 4730 6184 0 286 242 10 40 chr10 59492033 59492132 -80824633 - MIR SINE MIR -30 232 137 6459 53 1 0 chr10 59492330 59493079 -80823686 - L1PA5 LINE L1 -1 6153 5404 284 306 124 16 chr10 59493305 59493426 -80823339 + L2 LINE L2 3138 3271 -1 219 363 222 20 chr10 59493474 59494204 -80822561 - L2 LINE L2 -404 2910 2034 229 255 21 0 chr10 59494273 59494320 -80822445 - MLT1K LTR MaLR -16 572 525 285 172 0 62 chr10 59494574 59494638 -80822127 - MLT1K LTR MaLR -346 242 183 255 371 32 0 chr10 59495604 59495728 -80821037 + MIR SINE MIR 7 134 -128 3983 146 45 64 chr10 59495794 59496124 -80820641 + MER6 DNA MER2_type 66 401 -464 207 100 0 0 chr10 59496124 59496154 -80820611 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3983 146 45 64 chr10 59496154 59496599 -80820166 + MER6 DNA MER2_type 401 826 -39 232 222 0 0 chr10 59497467 59497512 -80819253 + L2 LINE L2 3266 3310 -3 210 254 32 32 chr10 59497657 59497720 -80819045 + MIR SINE MIR 91 153 -55 355 331 153 6 chr10 59498072 59498235 -80818530 + MIR3 SINE MIR 16 202 -6 467 298 30 0 chr10 59498383 59498514 -80818251 - MIR SINE MIR -18 244 110 775 136 0 8 chr10 59499035 59499153 -80817612 - FLAM_C SINE Alu -16 117 1 486 280 136 81 chr10 59499310 59500249 -80816516 + L1M2 LINE L1 383 1442 -5407 1421 180 53 35 chr10 59500530 59500814 -80815951 + AluJo SINE Alu 10 298 -14 1811 168 0 10 chr10 59500863 59501166 -80815599 - AluJb SINE Alu -12 300 1 432 74 0 0 chr10 59501674 59501773 -80814992 + L1PA10 LINE L1 6093 6191 0 1338 189 12 4 chr10 59502822 59503066 -80813699 + AluSx SINE Alu 59 304 -8 366 362 7 13 chr10 59503197 59503349 -80813416 + MIR SINE MIR 5 155 -107 940 269 52 26 chr10 59503349 59503732 -80813033 + LTR40c LTR ERVL 1 393 -72 271 297 67 0 chr10 59504242 59504356 -80812409 + MIR SINE MIR 76 206 -56 374 339 26 0 chr10 59505654 59505769 -80810996 - L2 LINE L2 -17 3255 3138 912 137 0 29 chr10 59505802 59505941 -80810824 + FLAM_C SINE Alu 1 135 -8 4172 132 25 25 chr10 59506402 59507037 -80809728 + MER41B LTR ERV1 1 635 0 979 255 28 25 chr10 59507329 59507682 -80809083 - MER57A LTR ERV1 -48 355 2 4044 74 4 0 chr10 59507811 59508309 -80808456 + SVA Other Other 870 1369 -17 206 81 27 0 chr10 59508314 59508351 -80808414 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 810 107 9 0 chr10 59508951 59509063 -80807702 - L1PA10 LINE L1 -26 6142 6030 1607 221 30 0 chr10 59509254 59509584 -80807181 - MER58B DNA MER1_type -1 340 1 8962 99 16 5 chr10 59510048 59511305 -80805460 + Harlequin LTR ERV1 3538 4808 -2088 916 197 46 105 chr10 59511608 59511979 -80804786 - MLT1A2 LTR MaLR -35 355 1 306 271 36 68 chr10 59512723 59512944 -80803821 + MER58A DNA MER1_type 11 224 0 30 27 0 0 chr10 59513021 59513058 -80803707 + AT_rich Low_complexity Low_complexity 1 37 0 2927 246 116 12 chr10 59513269 59514160 -80802605 + L2 LINE L2 1773 2755 -559 879 175 12 29 chr10 59514160 59514331 -80802434 + AluJo SINE Alu 30 197 -115 327 271 113 45 chr10 59514933 59515066 -80801699 - MIR3 SINE MIR -28 180 39 341 278 98 30 chr10 59515296 59515455 -80801310 + MIR SINE MIR 4 171 -58 5882 109 14 1 chr10 59515597 59516469 -80800296 - L1P LINE L1 -2905 3241 2359 21 0 0 0 chr10 59517476 59517497 -80799268 + AT_rich Low_complexity Low_complexity 1 21 0 776 235 148 39 chr10 59517603 59517914 -80798851 - LTR16A LTR ERVL -9 441 97 1917 106 18 28 chr10 59518789 59519112 -80797653 + AluSx SINE Alu 1 320 0 730 153 46 108 chr10 59519128 59519300 -80797465 - L1MC3 LINE L1 -21 7764 7618 1990 142 37 0 chr10 59519300 59519595 -80797170 + AluJo SINE Alu 6 311 -1 730 153 46 108 chr10 59519595 59519729 -80797036 - L1MC3 LINE L1 -167 7618 7477 221 259 19 0 chr10 59520550 59520604 -80796161 - MIR3 SINE MIR -46 162 108 288 239 204 11 chr10 59521538 59521626 -80795139 + MIR SINE MIR 6 110 -152 22 35 0 0 chr10 59521687 59521716 -80795049 + AT_rich Low_complexity Low_complexity 1 29 0 339 318 98 24 chr10 59521939 59522194 -80794571 + LTR33 LTR ERVL 1 274 -247 932 265 110 26 chr10 59522241 59522660 -80794105 - LTR16A LTR ERVL 0 457 4 271 234 43 21 chr10 59522707 59522801 -80793964 + LTR33 LTR ERVL 423 518 -3 372 43 0 0 chr10 59522801 59522847 -80793918 + (CA)n Simple_repeat Simple_repeat 2 47 0 405 286 92 10 chr10 59522849 59523045 -80793720 - L1MC4a LINE L1 -1929 5879 5668 1464 195 0 0 chr10 59523081 59523342 -80793423 - AluJb SINE Alu -3 309 49 458 174 64 9 chr10 59523452 59523561 -80793204 - LTR2B LTR ERV1 -26 464 350 * 772 236 27 73 chr10 59523557 59523816 -80792949 - LTR2 LTR ERV1 -202 247 1 7933 66 3 0 chr10 59523816 59524795 -80791970 - Harlequin LTR ERV1 0 6896 5915 2055 111 0 37 chr10 59525416 59525713 -80791052 + AluSx SINE Alu 1 286 -26 245 295 62 45 chr10 59527156 59527268 -80789497 + L2 LINE L2 3199 3312 -1 231 213 187 13 chr10 59527435 59527510 -80789255 + L2 LINE L2 3180 3267 -5 278 271 0 0 chr10 59527654 59527713 -80789052 - MIR3 SINE MIR -6 202 144 38803 86 5 5 chr10 59528764 59534905 -80781860 - L1PA6 LINE L1 0 6154 11 393 318 80 58 chr10 59535737 59536064 -80780701 - L3b LINE CR1 -148 1435 1102 419 222 259 24 chr10 59536145 59536357 -80780408 - MIR SINE MIR 0 262 1 397 218 208 0 chr10 59537346 59537447 -80779318 + MER94 DNA DNA 12 133 -1 331 363 12 23 chr10 59538020 59538191 -80778574 - MLT1J2 LTR MaLR -9 441 273 664 261 30 0 chr10 59538192 59538357 -80778408 - MLT1J2 LTR MaLR -280 170 1 296 220 0 0 chr10 59538521 59538580 -80778185 + MIR SINE MIR 84 142 -66 10911 193 41 40 chr10 59538736 59539559 -80777206 - L1PA16 LINE L1 -1 6165 5344 2218 128 0 0 chr10 59539559 59539856 -80776909 - AluSc SINE Alu -12 297 1 10911 193 41 40 chr10 59539856 59541983 -80774782 - L1PA16 LINE L1 -822 5344 3196 6383 43 0 0 chr10 59541983 59542703 -80774062 - L1PA5 LINE L1 -6 6148 5429 10911 193 41 40 chr10 59542703 59543558 -80773207 - L1PA16 LINE L1 -2970 3196 2343 486 220 68 0 chr10 59543587 59543705 -80773060 + MER109 Unknown Unknown 456 581 -1851 2855 97 14 8 chr10 59544526 59544888 -80771877 - THE1B LTR MaLR 0 364 1 2480 236 65 32 chr10 59544899 59545657 -80771108 - L1ME3A LINE L1 -6 6164 5382 308 333 99 56 chr10 59545657 59546141 -80770624 + L2 LINE L2 2399 2903 -411 370 336 98 12 chr10 59546396 59546640 -80770125 + L1M4 LINE L1 4891 5155 -991 3676 122 17 28 chr10 59547108 59547641 -80769124 + MER1A DNA MER1_type 1 527 0 468 35 0 0 chr10 59549637 59549695 -80767070 + (TC)n Simple_repeat Simple_repeat 1 58 0 195 287 129 20 chr10 59550135 59550236 -80766529 + L2 LINE L2 3161 3272 0 368 335 32 27 chr10 59551214 59551399 -80765366 + MER5A DNA MER1_type 2 187 -2 22 0 0 0 chr10 59551413 59551435 -80765330 + AT_rich Low_complexity Low_complexity 1 22 0 225 296 37 12 chr10 59552314 59552395 -80764370 + MIR SINE MIR 19 101 -107 239 331 83 28 chr10 59552550 59552695 -80764070 - MER5B DNA MER1_type -17 161 9 396 0 0 0 chr10 59553120 59553164 -80763601 + (CA)n Simple_repeat Simple_repeat 2 45 0 495 291 103 0 chr10 59553208 59553383 -80763382 + LTR33A LTR ERVL 1 193 -330 2446 196 30 19 chr10 59553613 59554153 -80762612 + L1MB8 LINE L1 5631 6176 -2 4236 135 23 9 chr10 59554343 59554987 -80761778 + MER39B LTR ERV1 1 653 0 2126 132 3 13 chr10 59556796 59557106 -80759659 + AluSx SINE Alu 1 307 -5 1801 117 6 29 chr10 59557120 59557439 -80759326 + THE1B LTR MaLR 1 364 0 238 273 172 10 chr10 59558925 59559024 -80757741 + MER5A DNA MER1_type 47 161 -28 457 291 55 0 chr10 59559658 59559785 -80756980 - MIR3 SINE MIR -9 199 66 493 306 120 60 chr10 59560647 59561120 -80755645 + L2 LINE L2 2347 2881 -391 2483 202 15 93 chr10 59561120 59561651 -80755114 - MLT2B3 LTR ERVL 0 554 74 468 0 0 0 chr10 59561651 59561703 -80755062 + (TG)n Simple_repeat Simple_repeat 2 53 0 2483 202 15 93 chr10 59561703 59561771 -80754994 - MLT2B3 LTR ERVL -480 74 2 493 306 120 60 chr10 59561771 59561957 -80754808 + L2 LINE L2 2881 3055 -217 2119 189 46 22 chr10 59562005 59562459 -80754306 + MLT1C LTR MaLR 3 467 0 189 239 0 0 chr10 59562578 59562624 -80754141 + L2 LINE L2 3262 3307 -6 195 333 25 25 chr10 59562726 59562807 -80753958 + L2 LINE L2 3145 3225 -47 368 290 84 8 chr10 59563019 59563150 -80753615 + MLT1I LTR MaLR 269 409 0 1420 280 58 2 chr10 59564004 59564415 -80752350 + L2 LINE L2 1239 1672 -1642 2051 207 15 24 chr10 59564416 59564875 -80751890 - LTR40b LTR ERVL 0 462 8 3095 266 67 69 chr10 59564933 59566266 -80750499 + L2 LINE L2 1806 3134 -179 2659 214 76 19 chr10 59566266 59566884 -80749881 + MER82 DNA MER2_type 1 653 0 3095 266 67 69 chr10 59566884 59567064 -80749701 + L2 LINE L2 3134 3313 0 300 321 75 0 chr10 59567446 59567552 -80749213 + L2 LINE L2 3147 3260 -12 394 313 72 12 chr10 59568105 59568271 -80748494 - MER5A DNA MER1_type -1 188 13 2073 125 0 0 chr10 59568432 59568768 -80747997 + AluSg SINE Alu 1 336 0 213 317 42 42 chr10 59568770 59568890 -80747875 + MER5B DNA MER1_type 59 178 0 223 308 0 55 chr10 59569574 59569665 -80747100 + MIR SINE MIR 164 249 -13 184 278 37 83 chr10 59570197 59570305 -80746460 + MER5A DNA MER1_type 42 144 -45 408 330 62 5 chr10 59571251 59571445 -80745320 - MIR SINE MIR -45 217 13 226 316 97 19 chr10 59572250 59572405 -80744360 + L2 LINE L2 2869 3035 -237 820 222 16 16 chr10 59573051 59573240 -80743525 + MER5A DNA MER1_type 1 189 0 211 315 141 11 chr10 59573243 59573335 -80743430 + MIR SINE MIR 19 122 -140 484 310 94 41 chr10 59573473 59573815 -80742950 + LTR16C LTR ERVL 132 491 0 22 0 0 0 chr10 59573829 59573851 -80742914 + AT_rich Low_complexity Low_complexity 1 22 0 219 277 24 0 chr10 59575031 59575114 -80741651 + (TAA)n Simple_repeat Simple_repeat 2 86 0 400 292 76 0 chr10 59575130 59575274 -80741491 - MIR SINE MIR -21 241 87 278 365 0 0 chr10 59575398 59575483 -80741282 + L2 LINE L2 3228 3312 -1 222 105 0 0 chr10 59575633 59575671 -80741094 + (TA)n Simple_repeat Simple_repeat 1 38 0 26 0 0 0 chr10 59576693 59576719 -80740046 + AT_rich Low_complexity Low_complexity 1 26 0 272 255 108 70 chr10 59577338 59577495 -80739270 - MER5A DNA MER1_type -7 182 20 186 156 0 0 chr10 59577741 59577773 -80738992 - MIR3 SINE MIR -7 201 170 197 365 67 10 chr10 59577927 59578031 -80738734 + L2 LINE L2 3162 3271 -1 657 316 130 17 chr10 59578154 59578499 -80738266 + MLT1J2 LTR MaLR 43 426 -24 453 217 123 0 chr10 59578798 59578904 -80737861 + MER45A DNA AcHobo 60 178 0 180 0 0 0 chr10 59579544 59579564 -80737201 + (TTG)n Simple_repeat Simple_repeat 2 21 0 247 154 0 77 chr10 59580217 59580269 -80736496 + MER63 DNA MER1_type 17 690 -146 302 354 101 41 chr10 59580295 59580695 -80736070 + L2 LINE L2 2628 3062 -210 1136 270 99 48 chr10 59580758 59581254 -80735511 - LTR33 LTR ERVL 0 521 1 346 287 155 8 chr10 59581338 59581467 -80735298 - MIR SINE MIR -113 149 2 296 316 43 36 chr10 59581482 59581621 -80735144 + L2 LINE L2 3173 3312 -1 258 213 80 0 chr10 59582752 59582827 -80733938 + MER102a DNA MER1_type 248 328 -2 386 342 49 1 chr10 59584163 59584312 -80732453 + MIR SINE MIR 38 191 -62 510 294 44 0 chr10 59584747 59584883 -80731882 - MIR SINE MIR -15 247 106 249 200 20 0 chr10 59584918 59584968 -80731797 - L2 LINE L2 -665 2649 2599 961 159 70 61 chr10 59585677 59585891 -80730874 - MER20 DNA MER1_type 0 219 4 268 244 160 38 chr10 59586307 59586438 -80730327 - L2 LINE L2 -3 3310 3164 1684 119 122 32 chr10 59586685 59587029 -80729736 + THE1C LTR MaLR 1 375 0 680 369 40 3 chr10 59587396 59587867 -80728898 - HERVL LTR ERVL -804 4850 4397 529 200 105 42 chr10 59587882 59588072 -80728693 + L1M4 LINE L1 4099 4300 -1846 26 50 0 0 chr10 59588508 59588548 -80728217 + AT_rich Low_complexity Low_complexity 1 40 0 2119 117 33 43 chr10 59588793 59589161 -80727604 + THE1B LTR MaLR 1 364 0 549 269 10 62 chr10 59589361 59589569 -80727196 - MIR SINE MIR -63 199 3 201 325 24 36 chr10 59590049 59590132 -80726633 + MIR3 SINE MIR 1 82 -126 225 0 0 0 chr10 59591057 59591082 -80725683 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2210 120 3 0 chr10 59591391 59591691 -80725074 + AluSx SINE Alu 1 301 -11 658 249 127 5 chr10 59591771 59591968 -80724797 - MIR SINE MIR -25 237 17 293 337 0 11 chr10 59591968 59592060 -80724705 + MER58A DNA MER1_type 1 91 -16 522 225 17 17 chr10 59592361 59592481 -80724284 - MER39 LTR ERV1 0 707 588 616 95 0 0 chr10 59592483 59592567 -80724198 + AluY SINE Alu 212 295 -16 1065 224 85 22 chr10 59592567 59592925 -80723840 - MER39 LTR ERV1 -115 592 4 1259 177 58 63 chr10 59593280 59593676 -80723089 + LTR37A LTR ERV1 32 425 -1 329 310 272 5 chr10 59593678 59593862 -80722903 + MIR SINE MIR 22 254 -8 2358 47 0 0 chr10 59593908 59594185 -80722580 + AluY SINE Alu 2 278 -33 185 0 40 0 chr10 59594189 59594214 -80722551 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 249 278 60 45 chr10 59595058 59595191 -80721574 - MER103 DNA DNA -12 154 20 211 192 39 19 chr10 59595367 59595419 -80721346 - MER5B DNA MER1_type -120 58 6 217 336 127 9 chr10 59595425 59595535 -80721230 + L2 LINE L2 3150 3272 0 687 0 48 10 chr10 59595610 59595714 -80721051 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 769 327 23 29 chr10 59596124 59596382 -80720383 + MIR SINE MIR 8 262 0 201 167 0 48 chr10 59596889 59596931 -80719834 + L2 LINE L2 1749 1788 -1526 403 333 6 39 chr10 59596949 59597105 -80719660 + MER5B DNA MER1_type 26 176 -2 224 247 169 13 chr10 59597588 59597665 -80719100 - MIR SINE MIR -74 188 100 401 249 85 62 chr10 59598853 59599317 -80717448 + HAL1 LINE L1 1871 2507 0 309 51 0 0 chr10 59599962 59600001 -80716764 + (TG)n Simple_repeat Simple_repeat 2 40 0 398 263 230 0 chr10 59600263 59600415 -80716350 - MIR SINE MIR -6 256 70 358 284 135 14 chr10 59600486 59600627 -80716138 + MER5A DNA MER1_type 29 186 -3 194 381 135 0 chr10 59601630 59601756 -80715009 + MIR3 SINE MIR 36 178 -30 1863 248 5 35 chr10 59602148 59602834 -80713931 - L1ME1 LINE L1 -4 6227 5595 2170 228 51 13 chr10 59602836 59603508 -80713257 - L1ME1 LINE L1 -3873 2523 1827 4831 258 45 31 chr10 59603513 59604773 -80711992 - L1ME1 LINE L1 -4617 1779 486 2060 220 20 7 chr10 59604773 59605228 -80711537 - MER65C LTR ERV1 0 461 1 4831 258 45 31 chr10 59605228 59605688 -80711077 - L1ME1 LINE L1 -5910 486 34 203 269 19 0 chr10 59606679 59606731 -80710034 - MIR3 SINE MIR -1 207 155 370 318 78 6 chr10 59606733 59606912 -80709853 - MER117 DNA MER1_type 0 197 6 194 277 43 0 chr10 59606913 59606960 -80709805 - MIR3 SINE MIR -42 166 118 208 298 149 35 chr10 59607588 59607702 -80709063 - MIR3 SINE MIR -78 130 4 288 328 42 19 chr10 59607789 59607995 -80708770 - MIR SINE MIR -22 240 33 34 24 0 0 chr10 59608269 59608310 -80708455 + AT_rich Low_complexity Low_complexity 1 41 0 182 61 0 30 chr10 59608690 59608723 -80708042 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4172 131 65 24 chr10 59608725 59608825 -80707940 - L1MA8 LINE L1 -3 6288 6194 2160 118 3 7 chr10 59608825 59609122 -80707643 - AluSx SINE Alu -16 296 1 4172 131 65 24 chr10 59609122 59609824 -80706941 - L1MA8 LINE L1 -97 6194 5453 539 170 20 11 chr10 59609839 59609952 -80706813 + L1MA7 LINE L1 4843 4955 -1191 726 133 3 4 chr10 59610095 59610224 -80706541 + L1MA7 LINE L1 5776 5903 -263 3643 158 46 1 chr10 59610227 59610957 -80705808 - L1M2 LINE L1 -743 5403 4688 1537 112 0 0 chr10 59611314 59611519 -80705246 + AluSg SINE Alu 1 205 -105 418 270 98 7 chr10 59611876 59612391 -80704374 - L1ME3A LINE L1 -289 5864 5238 379 330 111 11 chr10 59612449 59612710 -80704055 - L1ME3A LINE L1 -996 5133 4847 275 315 0 0 chr10 59612722 59612814 -80703951 - L1ME3A LINE L1 -1314 4815 4724 1059 226 0 5 chr10 59612826 59613043 -80703722 - LTR16A LTR ERVL -5 445 230 2124 0 0 0 chr10 59613216 59613443 -80703322 - AluYa5 SINE Alu 0 311 85 283 278 0 14 chr10 59613446 59613518 -80703247 - LTR16A LTR ERVL -328 122 52 590 282 58 39 chr10 59613580 59614062 -80702703 - L1ME3A LINE L1 -1433 4696 4206 292 286 86 9 chr10 59614071 59614176 -80702589 - L1ME3A LINE L1 -1974 4155 4043 532 226 91 65 chr10 59614248 59614434 -80702331 - MIR SINE MIR -41 221 31 357 239 88 98 chr10 59614634 59614919 -80701846 - L1ME3A LINE L1 -5779 340 59 308 226 21 21 chr10 59615828 59615921 -80700844 + L1MC4 LINE L1 6610 6702 -1340 2453 218 19 58 chr10 59615933 59616675 -80700090 - L1ME1 LINE L1 -15 6151 5439 384 169 28 0 chr10 59616672 59616743 -80700022 + L1ME LINE L1 5360 5432 -734 * 739 344 128 23 chr10 59619734 59620392 -80696373 - L2 LINE L2 -459 2855 2129 192 111 0 0 chr10 59620436 59620472 -80696293 + (T)n Simple_repeat Simple_repeat 1 36 0 462 232 143 24 chr10 59622188 59622356 -80694409 + MIR SINE MIR 61 248 -14 1298 173 15 15 chr10 59624046 59624312 -80692453 + L1MD3 LINE L1 7730 7995 0 24 0 0 0 chr10 59625547 59625571 -80691194 + AT_rich Low_complexity Low_complexity 1 24 0 256 169 197 28 chr10 59625744 59625815 -80690950 - MLT1A2 LTR MaLR 0 374 292 396 0 0 0 chr10 59626182 59626226 -80690539 + (TG)n Simple_repeat Simple_repeat 2 45 0 2324 144 10 10 chr10 59626318 59626707 -80690058 + LTR45B LTR ERV1 3 391 -98 250 333 22 58 chr10 59626901 59627039 -80689726 + MIR3 SINE MIR 64 196 -12 290 343 57 5 chr10 59629411 59629556 -80687209 - MIR SINE MIR -54 154 19 390 306 65 29 chr10 59632255 59632425 -80684340 + MLT1J LTR MaLR 329 504 -7 467 266 23 16 chr10 59632510 59632638 -80684127 + L1ME LINE L1 332 460 -5745 1811 247 132 20 chr10 59632677 59634019 -80682746 + L1ME LINE L1 1431 2895 -3320 23 33 0 0 chr10 59634136 59634166 -80682599 + AT_rich Low_complexity Low_complexity 1 30 0 365 325 17 8 chr10 59635186 59635303 -80681462 + L2 LINE L2 3179 3296 -17 847 246 125 86 chr10 59636236 59636794 -80679971 - MLT1H1 LTR MaLR -19 536 1 343 351 73 0 chr10 59636859 59637010 -80679755 - L3 LINE CR1 -28 1549 1388 549 270 44 82 chr10 59637018 59637333 -80679432 - L1MC5 LINE L1 -386 7575 7273 273 338 19 7 chr10 59637305 59637459 -80679306 - L1MC4 LINE L1 -568 7474 7319 * 1436 240 62 60 chr10 59637485 59638148 -80678617 - L1MC5 LINE L1 -755 7206 6536 2462 178 65 23 chr10 59638568 59639090 -80677675 - L1MB8 LINE L1 -6 6172 5629 468 325 110 13 chr10 59639467 59639704 -80677061 + MIR SINE MIR 3 262 0 613 206 7 20 chr10 59640564 59640710 -80676055 - L1MA10 LINE L1 -11 6323 6180 2350 222 48 12 chr10 59640747 59641794 -80674971 - L1ME1 LINE L1 -165 6001 4880 822 218 17 17 chr10 59642499 59642673 -80674092 - MIR SINE MIR -87 175 2 1984 183 42 23 chr10 59643190 59643617 -80673148 + MER63B DNA MER1_type 1 435 -1 867 286 36 4 chr10 59643953 59644205 -80672560 + MIR SINE MIR 3 262 0 219 36 0 0 chr10 59644344 59644372 -80672393 + (TG)n Simple_repeat Simple_repeat 1 28 0 364 248 64 18 chr10 59644430 59644539 -80672226 - MIR SINE MIR -59 149 36 981 171 52 38 chr10 59644735 59644946 -80671819 - MLT1C LTR MaLR -252 215 2 21 82 0 0 chr10 59645212 59645261 -80671504 + AT_rich Low_complexity Low_complexity 1 49 0 268 140 18 18 chr10 59645358 59645415 -80671350 - L1ME4a LINE L1 -5 6116 6060 1478 229 39 45 chr10 59646007 59646265 -80670500 - LTR40c LTR ERVL -4 461 205 2183 92 0 0 chr10 59646265 59646582 -80670183 - AluSg SINE Alu 0 317 1 1478 229 39 45 chr10 59646582 59646785 -80669980 - LTR40c LTR ERVL -260 205 2 191 345 35 0 chr10 59646934 59646992 -80669773 - L2 LINE L2 -3 3269 3210 324 220 17 0 chr10 59648400 59648459 -80668306 - MIR SINE MIR -187 75 16 198 0 0 0 chr10 59648463 59648485 -80668280 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 201 39 0 0 chr10 59648484 59648510 -80668255 + (GA)n Simple_repeat Simple_repeat 2 27 0 211 155 60 0 chr10 59648514 59648598 -80668167 + (TA)n Simple_repeat Simple_repeat 1 89 0 467 295 104 6 chr10 59648646 59648819 -80667946 - MIR SINE MIR -56 206 17 446 296 141 79 chr10 59648892 59649409 -80667356 - MLT1H LTR MaLR 0 549 1 225 224 0 20 chr10 59649467 59649516 -80667249 - MER63 DNA MER1_type -36 1024 977 472 163 0 12 chr10 59649516 59649596 -80667169 - MER63 DNA MER1_type -84 752 674 716 217 177 5 chr10 59650549 59650747 -80666018 + MIR SINE MIR 31 262 0 24 53 0 0 chr10 59651308 59651346 -80665419 + AT_rich Low_complexity Low_complexity 1 38 0 1081 175 34 0 chr10 59651494 59651671 -80665094 + FAM SINE Alu 1 47 -2 28 29 0 0 chr10 59652049 59652084 -80664681 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr10 59652141 59652177 -80664588 + AT_rich Low_complexity Low_complexity 1 36 0 4271 183 44 13 chr10 59653535 59654818 -80661947 - L1PB4 LINE L1 -4 6152 4834 265 304 0 0 chr10 59656353 59656422 -80660343 + L3 LINE CR1 1043 1111 -466 255 114 0 0 chr10 59656424 59656468 -80660297 + (TA)n Simple_repeat Simple_repeat 2 45 0 272 349 151 4 chr10 59656468 59656700 -80660065 + L3 LINE CR1 1256 1521 -56 1003 160 38 37 chr10 59656845 59657135 -80659630 + MER2 DNA MER2_type 4 345 0 186 167 0 0 chr10 59657379 59657415 -80659350 + (CATA)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr10 59660073 59660097 -80656668 + AT_rich Low_complexity Low_complexity 1 24 0 7532 168 40 15 chr10 59660129 59661083 -80655682 - L1M2 LINE L1 -635 5656 4727 180 0 0 0 chr10 59661083 59661103 -80655662 + (TG)n Simple_repeat Simple_repeat 1 20 0 7532 168 40 15 chr10 59661103 59661705 -80655060 - L1M2 LINE L1 -1564 4727 4054 2295 76 0 7 chr10 59661705 59661993 -80654772 - AluY SINE Alu -15 296 11 7532 168 40 15 chr10 59661993 59662234 -80654531 - L1M2 LINE L1 -2237 4054 3820 468 359 93 33 chr10 59662934 59663235 -80653530 + L3 LINE CR1 892 1210 -367 21 0 0 0 chr10 59663378 59663399 -80653366 + AT_rich Low_complexity Low_complexity 1 21 0 3674 137 9 44 chr10 59664287 59664922 -80651843 - MER39B LTR ERV1 0 653 41 279 0 0 0 chr10 59664922 59664953 -80651812 + (T)n Simple_repeat Simple_repeat 1 31 0 231 192 77 19 chr10 59665878 59665930 -80650835 + L2 LINE L2 3245 3299 -14 207 293 152 40 chr10 59666771 59666870 -80649895 + L2 LINE L2 3204 3313 0 217 274 0 0 chr10 59667735 59667786 -80648979 + C-rich Low_complexity Low_complexity 3 53 0 44 20 0 0 chr10 59669151 59669202 -80647563 + AT_rich Low_complexity Low_complexity 1 51 0 396 0 0 0 chr10 59670835 59670879 -80645886 + (CA)n Simple_repeat Simple_repeat 2 45 0 309 235 0 82 chr10 59671242 59671340 -80645425 - L1MC4 LINE L1 -1339 6703 6614 * 343 296 20 0 chr10 59671270 59671368 -80645397 + L1MC4 LINE L1 6614 6713 -1329 428 256 195 6 chr10 59671972 59672136 -80644629 + MIR SINE MIR 2 196 -66 1977 98 0 0 chr10 59673351 59673605 -80643160 - AluSg SINE Alu -28 282 29 1087 228 9 13 chr10 59675138 59675362 -80641403 + MER58A DNA MER1_type 1 223 -1 25800 38 1 0 chr10 59675634 59675977 -80640788 - L1PA4 LINE L1 0 6155 5814 2794 16 0 0 chr10 59675977 59676282 -80640483 - AluYa5 SINE Alu -6 305 1 25800 38 1 0 chr10 59676282 59679898 -80636867 - L1PA4 LINE L1 -341 5814 2212 854 189 200 11 chr10 59680164 59680429 -80636336 - MER5C DNA MER1_type -7 317 3 21 0 0 0 chr10 59680534 59680555 -80636210 + AT_rich Low_complexity Low_complexity 1 21 0 192 355 28 9 chr10 59680757 59680864 -80635901 - L2 LINE L2 -237 3035 2927 231 259 79 43 chr10 59681175 59681314 -80635451 - Charlie1 DNA MER1_type -315 2446 2303 22 35 0 0 chr10 59683209 59683238 -80633527 + AT_rich Low_complexity Low_complexity 1 29 0 836 191 92 0 chr10 59683308 59683481 -80633284 - MER5A DNA MER1_type 0 189 1 298 292 55 89 chr10 59683710 59684001 -80632764 - L2 LINE L2 -804 2510 2230 1286 114 11 11 chr10 59685073 59685257 -80631508 - AluSg/x SINE Alu -9 303 120 1280 212 57 55 chr10 59686223 59686679 -80630086 - MER39 LTR ERV1 0 707 53 332 254 155 47 chr10 59686826 59687019 -80629746 + Charlie7 DNA MER1_type 5 218 -2394 797 225 151 38 chr10 59687047 59687408 -80629357 + Charlie7 DNA MER1_type 2143 2559 -53 2321 73 3 13 chr10 59687408 59687709 -80629056 - AluY SINE Alu -13 298 1 797 225 151 38 chr10 59687709 59687764 -80629001 + Charlie7 DNA MER1_type 2559 2606 -6 22185 46 0 0 chr10 59689046 59692591 -80624174 - L1PA5 LINE L1 0 6154 2611 552 187 58 22 chr10 59693195 59693334 -80623431 + L1PB4 LINE L1 6011 6154 -2 27 0 0 0 chr10 59693336 59693363 -80623402 + AT_rich Low_complexity Low_complexity 1 27 0 412 355 16 5 chr10 59693627 59693821 -80622944 - MIR SINE MIR 0 208 11 7165 48 1 1 chr10 59693996 59694909 -80621856 + L1PA5 LINE L1 5228 6141 -13 2090 107 38 0 chr10 59695856 59696147 -80620618 - AluSq SINE Alu -11 302 1 332 137 0 0 chr10 59696680 59696731 -80620034 - L1P3 LINE L1 -6182 279 229 10602 158 36 45 chr10 59698128 59698602 -80618163 + L1P LINE L1 12 489 -5657 2399 71 3 3 chr10 59698602 59698899 -80617866 + AluY SINE Alu 1 297 -14 10602 158 36 45 chr10 59698899 59700626 -80616139 + L1P LINE L1 489 2192 -3954 6732 59 25 1 chr10 59700626 59702062 -80614703 + L1PA7 LINE L1 4706 6152 -2 1591 182 3 35 chr10 59702079 59702363 -80614402 + AluJo SINE Alu 1 275 -37 1944 133 3 0 chr10 59702363 59702649 -80614116 - AluSp SINE Alu -7 306 20 1591 182 3 35 chr10 59702649 59702683 -80614082 + AluJo SINE Alu 275 309 -3 2635 141 21 2 chr10 59702886 59703304 -80613461 + MSTC LTR MaLR 1 426 -2 1912 154 9 95 chr10 59703322 59703763 -80613002 + MER57A LTR ERV1 1 403 0 21 0 0 0 chr10 59704025 59704046 -80612719 + AT_rich Low_complexity Low_complexity 1 21 0 193 318 15 0 chr10 59704185 59704251 -80612514 + L2 LINE L2 2661 2727 -587 28 0 0 0 chr10 59704423 59704451 -80612314 + AT_rich Low_complexity Low_complexity 1 28 0 250 224 0 149 chr10 59705021 59705128 -80611637 + L1M4 LINE L1 4886 4976 -1170 236 242 0 0 chr10 59705229 59705295 -80611470 + L1M4 LINE L1 5091 5156 -990 711 290 24 23 chr10 59705603 59705921 -80610844 + L1MC4a LINE L1 6476 6883 -1036 256 333 71 58 chr10 59706503 59706812 -80609953 - L2 LINE L2 -47 3266 2954 350 323 19 37 chr10 59706893 59707054 -80609711 - L2 LINE L2 -858 2456 2299 495 186 119 0 chr10 59707139 59707257 -80609508 - MER3 DNA MER1_type -10 199 68 502 226 51 57 chr10 59707360 59707536 -80609229 - MER39 LTR ERV1 -285 422 203 426 296 127 19 chr10 59707601 59707814 -80608951 - L2 LINE L2 -1358 1956 1721 34 42 0 0 chr10 59708640 59708688 -80608077 + AT_rich Low_complexity Low_complexity 1 48 0 683 233 61 6 chr10 59709147 59709310 -80607455 - MER69A DNA AcHobo 0 177 6 195 271 50 114 chr10 59709328 59709468 -80607297 - MIR SINE MIR -108 154 24 285 257 0 0 chr10 59709664 59709734 -80607031 - MER69A DNA AcHobo -16 161 92 387 205 268 0 chr10 59709749 59709861 -80606904 - MER69A DNA AcHobo -33 144 3 622 133 0 0 chr10 59709898 59710026 -80606739 - AluSg/x SINE Alu 0 324 197 21 0 0 0 chr10 59711461 59711482 -80605283 + AT_rich Low_complexity Low_complexity 1 21 0 232 272 54 65 chr10 59711587 59711679 -80605086 - MIR3 SINE MIR -24 184 94 690 278 53 37 chr10 59711721 59711966 -80604799 + MIR SINE MIR 4 252 -10 207 114 0 0 chr10 59712058 59712093 -80604672 + (ACTAG)n Simple_repeat Simple_repeat 3 37 0 209 189 0 0 chr10 59713233 59713270 -80603495 + (ACTAG)n Simple_repeat Simple_repeat 3 39 0 389 246 67 22 chr10 59715444 59715578 -80601187 - MIR SINE MIR -113 149 10 24 0 0 0 chr10 59716124 59716148 -80600617 + AT_rich Low_complexity Low_complexity 1 24 0 1901 142 17 7 chr10 59716188 59716477 -80600288 - AluJb SINE Alu -20 292 1 191 300 20 0 chr10 59716483 59716533 -80600232 - MIR SINE MIR -61 147 97 743 137 26 0 chr10 59717019 59717225 -80599540 + AluJb SINE Alu 165 373 0 2875 3 0 0 chr10 59717857 59718168 -80598597 + AluYa5 SINE Alu 1 311 0 221 293 243 21 chr10 59719664 59719804 -80596961 + MIR3 SINE MIR 33 203 -5 1023 118 15 158 chr10 59721759 59722031 -80594734 + Tigger3(Golem) DNA MER2_type 65 297 -2732 1824 123 0 4 chr10 59722071 59722323 -80594442 - AluSx SINE Alu -28 284 34 640 203 0 17 chr10 59722421 59722539 -80594226 + FLAM_A SINE Alu 1 116 -17 276 30 0 0 chr10 59722543 59722576 -80594189 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 189 274 123 19 chr10 59723072 59723178 -80593587 + L2 LINE L2 2004 2120 -1194 206 200 0 0 chr10 59723301 59723336 -80593429 + (CA)n Simple_repeat Simple_repeat 2 36 0 254 246 154 27 chr10 59723679 59723789 -80592976 - MER76 LTR ERV -85 603 480 210 37 0 0 chr10 59723799 59723826 -80592939 + (TGG)n Simple_repeat Simple_repeat 1 27 0 228 238 48 71 chr10 59723842 59723926 -80592839 - MER76 LTR ERV -337 351 270 25 0 0 0 chr10 59723952 59723977 -80592788 + AT_rich Low_complexity Low_complexity 1 25 0 1416 203 105 42 chr10 59724431 59724839 -80591926 - MSTB2 LTR MaLR -1 456 23 311 342 46 7 chr10 59724876 59725028 -80591737 + L1 LINE L1 2392 2549 -3597 436 253 81 0 chr10 59725064 59725238 -80591527 - L1M4 LINE L1 -1016 5130 4943 253 302 48 8 chr10 59725382 59725508 -80591257 + L1ME LINE L1 5617 5747 -417 22 0 0 0 chr10 59725576 59725598 -80591167 + AT_rich Low_complexity Low_complexity 1 22 0 2932 101 14 25 chr10 59726839 59727276 -80589489 - MER57B LTR ERV1 -2 432 1 1942 163 0 3 chr10 59727512 59727812 -80588953 - AluJb SINE Alu -7 305 7 723 96 48 0 chr10 59727908 59728012 -80588753 - MER4B LTR ERV1 0 610 502 2269 142 26 5 chr10 59728204 59728584 -80588181 - MER4B LTR ERV1 -32 578 191 596 317 103 59 chr10 59728804 59729640 -80587125 + L1M4 LINE L1 2131 3003 -3143 357 0 0 0 chr10 59729678 59729717 -80587048 + L1PA6 LINE L1 5902 5940 -214 * 384 204 41 10 chr10 59729714 59729812 -80586953 - L1MC4 LINE L1 -175 7867 7767 1222 215 119 8 chr10 59732263 59732640 -80584125 - LTR37A LTR ERV1 0 426 8 288 362 28 23 chr10 59733640 59733817 -80582948 + MIR3 SINE MIR 18 195 -13 481 227 20 0 chr10 59733896 59734046 -80582719 + CT-rich Low_complexity Low_complexity 4 156 0 233 243 149 0 chr10 59735259 59735333 -80581432 - L2 LINE L2 -4 3309 3225 2367 108 11 32 chr10 59736791 59737163 -80579602 - THE1B LTR MaLR 0 364 1 15669 121 12 16 chr10 59737424 59739935 -80576830 - L1P LINE L1 -3003 3143 642 1362 104 14 24 chr10 59740691 59740903 -80575862 - Tigger5 DNA MER2_type 0 2323 2114 672 148 65 0 chr10 59740900 59741008 -80575757 - Tigger5 DNA MER2_type -2208 115 1 * 4800 225 86 35 chr10 59742249 59743858 -80572907 + L1MDa LINE L1 261 2091 -4449 359 227 68 0 chr10 59743855 59743943 -80572822 - L1MC3 LINE L1 -234 7551 7458 * 194 241 37 19 chr10 59743944 59743998 -80572767 - MER5B DNA MER1_type -123 55 1 377 264 176 68 chr10 59744149 59744603 -80572162 - LTR33 LTR ERVL -17 504 2 2171 88 7 23 chr10 59744668 59744976 -80571789 + AluSc SINE Alu 1 303 -6 25 75 0 0 chr10 59746514 59746567 -80570198 + AT_rich Low_complexity Low_complexity 1 53 0 33 25 0 0 chr10 59747268 59747308 -80569457 + AT_rich Low_complexity Low_complexity 1 40 0 2493 67 0 22 chr10 59749514 59749830 -80566935 + AluY SINE Alu 1 309 -2 196 264 38 0 chr10 59751139 59751192 -80565573 + MIR SINE MIR 49 103 -159 189 0 0 0 chr10 59752827 59752848 -80563917 + (TTAAA)n Simple_repeat Simple_repeat 1 21 0 228 111 0 0 chr10 59752915 59752951 -80563814 + (TAA)n Simple_repeat Simple_repeat 2 37 0 180 303 0 30 chr10 59753017 59753083 -80563682 - L2 LINE L2 -323 2990 2927 1946 103 44 7 chr10 59754976 59755293 -80561472 - AluSx SINE Alu 0 327 1 199 333 14 14 chr10 59755595 59755667 -80561098 + MIR SINE MIR 75 146 -116 225 178 0 0 chr10 59755810 59755855 -80560910 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 260 278 35 43 chr10 59758202 59758317 -80558448 + MIR SINE MIR 34 147 -115 384 225 142 74 chr10 59758475 59758605 -80558160 + L1MC4a LINE L1 5811 5931 -1877 1721 176 7 13 chr10 59758605 59758906 -80557859 + AluJo SINE Alu 1 299 -13 384 225 142 74 chr10 59758906 59759086 -80557679 + L1MC4a LINE L1 5931 6142 -1666 617 320 167 42 chr10 59760184 59760241 -80556524 + L2 LINE L2 2260 2309 -1004 772 142 9 0 chr10 59760241 59760354 -80556411 + MER81 DNA DNA 1 114 0 617 320 167 42 chr10 59760354 59761219 -80555546 + L2 LINE L2 2309 3308 -5 331 317 53 48 chr10 59761251 59761416 -80555349 - MIR SINE MIR -61 147 16 226 191 0 0 chr10 59761928 59761970 -80554795 - L2 LINE L2 -1 3312 3271 406 302 87 0 chr10 59762251 59762377 -80554388 + L2 LINE L2 2255 2391 -923 302 333 92 13 chr10 59764048 59764201 -80552564 + MIR3 SINE MIR 41 205 -3 288 304 0 0 chr10 59764575 59764644 -80552121 + polypurine Low_complexity Low_complexity 4 72 0 21 0 0 0 chr10 59765722 59765743 -80551022 + GC_rich Low_complexity Low_complexity 1 21 0 422 265 99 43 chr10 59766462 59766624 -80550141 + MIR3 SINE MIR 32 202 -6 244 268 0 0 chr10 59767060 59767116 -80549649 + (TG)n Simple_repeat Simple_repeat 1 56 0 561 282 62 5 chr10 59767341 59767536 -80549229 - MIR SINE MIR -25 237 32 308 228 76 11 chr10 59767779 59767871 -80548894 + MIR3 SINE MIR 89 186 -22 266 146 0 18 chr10 59768606 59768661 -80548104 + (GAA)n Simple_repeat Simple_repeat 3 56 0 184 320 0 77 chr10 59769705 59769783 -80546982 - MER5B DNA MER1_type -1 177 106 279 0 0 0 chr10 59769827 59769858 -80546907 + (CA)n Simple_repeat Simple_repeat 2 32 0 252 310 12 12 chr10 59770898 59770994 -80545771 + GA-rich Low_complexity Low_complexity 1 96 0 1745 142 100 7 chr10 59773205 59773515 -80543250 - MER44D DNA MER2_type 0 609 1 25 31 0 0 chr10 59773732 59773764 -80543001 + AT_rich Low_complexity Low_complexity 1 32 0 299 300 67 17 chr10 59773904 59774024 -80542741 - MIR SINE MIR -1 261 136 277 339 71 19 chr10 59775017 59775132 -80541633 + MIR SINE MIR 2 123 -85 541 165 73 9 chr10 59775940 59776049 -80540716 + L1MC2 LINE L1 6224 6339 -5 286 295 70 31 chr10 59776059 59776188 -80540577 + MIR SINE MIR 5 138 -124 21 0 0 0 chr10 59776247 59776268 -80540497 + AT_rich Low_complexity Low_complexity 1 21 0 505 302 26 16 chr10 59776799 59776988 -80539777 - MIR SINE MIR 0 262 72 22 35 0 0 chr10 59777715 59777744 -80539021 + AT_rich Low_complexity Low_complexity 1 29 0 700 158 33 0 chr10 59777769 59777889 -80538876 - L1MD1 LINE L1 -6 6236 6113 291 253 30 129 chr10 59778219 59778335 -80538430 + MIR SINE MIR 6 95 -167 2333 117 76 15 chr10 59778335 59778678 -80538087 - THE1B LTR MaLR 0 364 1 291 253 30 129 chr10 59778678 59778763 -80538002 + MIR SINE MIR 95 187 -75 985 189 22 70 chr10 59778868 59779096 -80537669 - MER20 DNA MER1_type -1 218 2 291 54 0 0 chr10 59779231 59779268 -80537497 + (CA)n Simple_repeat Simple_repeat 1 37 0 215 324 27 34 chr10 59779524 59779672 -80537093 + MER5B DNA MER1_type 2 148 -30 208 329 33 59 chr10 59779542 59779694 -80537071 - MER5A DNA MER1_type -22 167 20 * 1332 185 139 12 chr10 59780204 59780528 -80536237 - MLT1A1 LTR MaLR 0 365 1 535 243 18 0 chr10 59780565 59780676 -80536089 + MER81 DNA DNA 1 113 -1 223 293 142 19 chr10 59780976 59781082 -80535683 - MER5A DNA MER1_type -38 151 33 253 277 45 18 chr10 59782596 59782708 -80534057 + MIR SINE MIR 148 262 0 244 54 83 6 chr10 59782835 59782883 -80533882 - L1MA1 LINE L1 0 6302 6258 213 39 0 0 chr10 59784437 59784463 -80532302 + (TG)n Simple_repeat Simple_repeat 2 27 0 243 297 11 43 chr10 59784941 59785126 -80531639 + C-rich Low_complexity Low_complexity 2 180 0 210 282 29 10 chr10 59785223 59785326 -80531439 + (CA)n Simple_repeat Simple_repeat 1 105 0 1091 186 0 0 chr10 59785901 59786089 -80530676 + L1M3 LINE L1 5542 5729 -454 958 202 84 2 chr10 59786092 59786402 -80530363 + MLT1B LTR MaLR 1 386 -4 2650 113 4 87 chr10 59786402 59786640 -80530125 + L1MB3 LINE L1 5724 5980 -203 1868 158 0 3 chr10 59786640 59786925 -80529840 + AluSx SINE Alu 1 284 -28 270 0 0 0 chr10 59786925 59786955 -80529810 + (TA)n Simple_repeat Simple_repeat 2 31 0 2650 113 4 87 chr10 59786955 59787164 -80529601 + L1MB3 LINE L1 5979 6204 21 2276 109 3 3 chr10 59787164 59787467 -80529298 + AluSx SINE Alu 1 303 -9 2316 110 0 0 chr10 59787467 59787776 -80528989 + AluSx SINE Alu 1 309 -3 2650 113 4 87 chr10 59787776 59787810 -80528955 + L1MB3 LINE L1 6133 6168 -15 365 296 45 62 chr10 59787994 59788170 -80528595 + MIR SINE MIR 56 228 -34 247 339 17 9 chr10 59788279 59788394 -80528371 + MIR3 SINE MIR 72 187 -21 1938 131 0 4 chr10 59788619 59788893 -80527872 + AluSx SINE Alu 1 273 -39 2209 125 18 9 chr10 59789417 59789752 -80527013 - MER1B DNA MER1_type -1 338 1 278 214 43 68 chr10 59789979 59790096 -80526669 - L2 LINE L2 -92 3221 3108 213 276 17 0 chr10 59791133 59791191 -80525574 + L2 LINE L2 3197 3255 -58 346 283 9 44 chr10 59791324 59791437 -80525328 - MER5A DNA MER1_type -3 186 78 2464 80 0 0 chr10 59792197 59792497 -80524268 - AluY SINE Alu -11 300 1 3324 143 21 34 chr10 59793121 59793473 -80523292 - L1MA5 LINE L1 -4 6296 5952 2592 61 0 10 chr10 59793473 59793786 -80522979 - AluY SINE Alu -1 310 1 3324 143 21 34 chr10 59793786 59794000 -80522765 - L1MA5 LINE L1 -348 5952 5737 481 301 27 38 chr10 59795388 59795558 -80521207 + MLT1K LTR MaLR 129 298 -290 2006 252 93 19 chr10 59795558 59796141 -80520624 + MLT1E2 LTR MaLR 1 626 0 481 301 27 38 chr10 59796141 59796156 -80520609 + MLT1K LTR MaLR 298 312 -276 466 273 62 31 chr10 59796188 59796382 -80520383 + MLT1K LTR MaLR 377 576 -12 1063 47 78 0 chr10 59797460 59797588 -80519177 - MER85 DNA T2_type 0 139 2 1884 163 52 34 chr10 59799284 59799671 -80517094 + L1MA6 LINE L1 5903 6296 -4 1081 194 201 10 chr10 59801056 59801370 -80515395 + L1ME3A LINE L1 5789 6162 -8 848 295 75 12 chr10 59803360 59803855 -80512910 + L2 LINE L2 2727 3251 -62 821 37 37 0 chr10 59804009 59804118 -80512647 + MSTB2 LTR MaLR 1 113 -344 1849 132 4 40 chr10 59804172 59804275 -80512490 - L1P4 LINE L1 -732 5442 5337 2186 116 0 0 chr10 59804275 59804569 -80512196 + AluSg SINE Alu 1 294 -16 1849 132 4 40 chr10 59804569 59804899 -80511866 - L1P4 LINE L1 -837 5337 5019 1996 56 15 37 chr10 59804899 59805168 -80511597 + L1PA13 LINE L1 5895 6157 -6 645 107 33 8 chr10 59805169 59805290 -80511475 + GA-rich Low_complexity Low_complexity 5 128 0 1152 220 26 15 chr10 59805291 59805559 -80511206 + MSTB1 LTR MaLR 162 432 0 216 352 143 0 chr10 59806808 59806913 -80509852 - L2 LINE L2 -5 3267 3148 1965 142 10 0 chr10 59807013 59807315 -80509450 + AluSx SINE Alu 1 305 -7 186 329 38 0 chr10 59807859 59807938 -80508827 - MIR SINE MIR -46 216 135 761 248 49 22 chr10 59807968 59808194 -80508571 - L2 LINE L2 0 3313 3082 388 308 172 56 chr10 59808654 59809067 -80507698 + L1M2 LINE L1 907 1367 -5482 674 323 144 45 chr10 59809483 59810280 -80506485 + L2 LINE L2 2393 3266 -6 292 317 50 17 chr10 59811224 59811344 -80505421 + MER5A DNA MER1_type 37 160 -29 221 280 40 27 chr10 59811911 59811986 -80504779 - L2 LINE L2 -1 3271 3196 322 268 176 56 chr10 59812093 59812395 -80504370 + LTR16C LTR ERVL 152 489 -2 219 345 50 25 chr10 59812396 59812515 -80504250 - L2 LINE L2 -71 3201 3080 491 291 92 22 chr10 59812819 59813135 -80503630 + L2 LINE L2 2561 2898 -416 490 290 105 46 chr10 59814695 59814933 -80501832 - MIR SINE MIR -9 253 2 288 259 166 16 chr10 59815641 59815834 -80500931 - L1ME4a LINE L1 -84 6037 5816 630 284 31 10 chr10 59815882 59816076 -80500689 + MER20B DNA MER1_type 6 203 -580 1874 132 14 18 chr10 59816357 59816638 -80500127 - AluSx SINE Alu -18 294 15 430 290 93 48 chr10 59816697 59816890 -80499875 + L1ME4a LINE L1 5608 5820 -301 2087 131 55 0 chr10 59816890 59817219 -80499546 - MER7A DNA MER2_type -1 345 1 430 290 93 48 chr10 59817219 59817315 -80499450 + L1ME4a LINE L1 5820 5910 -211 250 239 0 28 chr10 59817319 59817390 -80499375 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 279 0 0 0 chr10 59817544 59817575 -80499190 + (TG)n Simple_repeat Simple_repeat 2 32 0 1764 42 0 0 chr10 59818163 59818375 -80498390 - L1PA3 LINE L1 0 6155 5944 329 313 149 0 chr10 59818904 59819038 -80497727 - MIR3 SINE MIR -17 191 38 423 0 0 0 chr10 59819488 59819535 -80497230 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr10 59819857 59819887 -80496878 + AT_rich Low_complexity Low_complexity 1 30 0 296 350 91 0 chr10 59820077 59820220 -80496545 + MIR3 SINE MIR 52 207 -1 628 292 175 7 chr10 59820459 59820750 -80496015 - MER102b DNA MER1_type 0 341 2 2593 126 15 0 chr10 59820931 59821328 -80495437 - MER57A LTR ERV1 0 403 1 1730 203 48 58 chr10 59821479 59821976 -80494789 + MLT1D LTR MaLR 1 492 -13 217 152 0 22 chr10 59823074 59823120 -80493645 + T-rich Low_complexity Low_complexity 1 45 0 257 270 50 70 chr10 59823342 59823442 -80493323 + L3 LINE CR1 1478 1575 -2 241 306 82 12 chr10 59823878 59823963 -80492802 + MIR SINE MIR 33 123 -139 256 221 15 0 chr10 59824763 59824831 -80491934 + L1ME4a LINE L1 5777 5845 -276 233 75 25 0 chr10 59824916 59824956 -80491809 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 259 160 15 chr10 59824957 59825088 -80491677 + L1ME4a LINE L1 5971 6120 -1 432 204 32 0 chr10 59826017 59826110 -80490655 + MIR SINE MIR 56 151 -111 25 0 0 0 chr10 59826321 59826346 -80490419 + AT_rich Low_complexity Low_complexity 1 25 0 617 216 58 18 chr10 59827173 59827344 -80489421 + MLT1G LTR MaLR 413 590 0 232 327 69 30 chr10 59828172 59828273 -80488492 - L2 LINE L2 -32 3240 3136 243 0 0 0 chr10 59828906 59828933 -80487832 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2118 131 6 13 chr10 59829743 59830055 -80486710 - AluSx SINE Alu 0 312 3 355 295 128 26 chr10 59830182 59830338 -80486427 - MIR SINE MIR -10 252 81 214 125 0 0 chr10 59831489 59831521 -80485244 - L2 LINE L2 -92 3180 3149 575 327 117 45 chr10 59831670 59832533 -80484232 - L2 LINE L2 -230 3042 2110 206 200 0 0 chr10 59832624 59832659 -80484106 + (TG)n Simple_repeat Simple_repeat 2 36 0 192 274 123 19 chr10 59832782 59832888 -80483877 - L2 LINE L2 -1194 2120 2004 363 44 0 0 chr10 59833384 59833429 -80483336 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 636 212 0 17 chr10 59833433 59833551 -80483214 - FLAM_A SINE Alu -17 116 1 1927 114 0 11 chr10 59833649 59833921 -80482844 + AluSx SINE Alu 34 302 -10 4195 31 14 8 chr10 59834813 59835329 -80481436 + L1PA4 LINE L1 5635 6153 -2 406 285 97 11 chr10 59836425 59836611 -80480154 - LTR67 LTR ERVL 0 557 356 347 257 9 9 chr10 59836680 59836793 -80479972 - MER104 DNA Tc2 -62 118 6 340 301 20 102 chr10 59836948 59837144 -80479621 - LTR67 LTR ERVL -374 183 4 2334 122 0 0 chr10 59838068 59838379 -80478386 - AluSq SINE Alu 0 313 3 399 281 25 0 chr10 59838454 59838575 -80478190 - MIR SINE MIR -8 254 131 1379 223 74 36 chr10 59839269 59839714 -80477051 - MLT1C LTR MaLR 0 467 6 25 0 0 0 chr10 59840615 59840640 -80476125 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr10 59841121 59841145 -80475620 + AT_rich Low_complexity Low_complexity 1 24 0 502 79 66 13 chr10 59841184 59841260 -80475505 + MADE1 DNA Mariner 1 80 0 2378 86 0 13 chr10 59841808 59842121 -80474644 + AluSp SINE Alu 1 309 -4 861 124 16 78 chr10 59842881 59843074 -80473691 + MER53 DNA DNA 7 187 -2 744 310 27 40 chr10 59843867 59844270 -80472495 + MLT1I LTR MaLR 1 398 -11 2520 64 0 3 chr10 59844352 59844664 -80472101 - AluY SINE Alu 0 311 1 2454 65 0 13 chr10 59844676 59844984 -80471781 - AluY SINE Alu -7 304 1 549 263 77 21 chr10 59845024 59845218 -80471547 - MIR SINE MIR -56 206 2 3847 62 6 2 chr10 59847934 59848432 -80468333 - L1PA7 LINE L1 -4 6150 5651 2167 120 10 0 chr10 59849045 59849336 -80467429 - AluSg SINE Alu -16 294 1 470 267 41 61 chr10 59849753 59849891 -80466874 + MER31-int LTR ERV1 3345 3445 -1491 1779 150 42 21 chr10 59849891 59850177 -80466588 + AluSg SINE Alu 1 292 -18 470 267 41 61 chr10 59850177 59850351 -80466414 + MER31-int LTR ERV1 3445 3621 -1315 279 279 34 41 chr10 59850375 59850522 -80466243 + MER31-int LTR ERV1 3842 3987 -1599 1778 148 31 10 chr10 59851458 59851749 -80465016 + AluSx SINE Alu 1 297 -15 2167 105 7 7 chr10 59852119 59852425 -80464340 + AluSx SINE Alu 3 308 -4 203 288 99 54 chr10 59853167 59853278 -80463487 - MIR SINE MIR -56 206 91 297 274 145 17 chr10 59854854 59854971 -80461794 + MIR SINE MIR 20 151 -111 188 323 10 92 chr10 59855196 59855391 -80461374 + L2 LINE L2 2811 2989 -283 216 0 0 0 chr10 59855399 59855423 -80461342 + (TAA)n Simple_repeat Simple_repeat 2 25 0 186 333 79 9 chr10 59855582 59855696 -80461069 + L2 LINE L2 3180 3301 -12 308 310 126 29 chr10 59855707 59855881 -80460884 + MIR SINE MIR 28 218 -44 224 370 43 76 chr10 59856045 59856256 -80460509 - L2 LINE L2 -4 3268 3065 1855 179 53 35 chr10 59857105 59857648 -80459117 + MLT2A2 LTR ERVL 1 554 0 236 321 18 0 chr10 59857915 59857971 -80458794 - L2 LINE L2 -8 3264 3208 226 244 73 37 chr10 59857975 59858057 -80458708 - MER5C DNA MER1_type -2 322 238 296 229 156 18 chr10 59858069 59858178 -80458587 - MER5C DNA MER1_type -200 124 1 1917 148 28 0 chr10 59858509 59858792 -80457973 + AluSx SINE Alu 3 293 -19 281 248 195 18 chr10 59859937 59860050 -80456715 + MER5A DNA MER1_type 7 139 -50 214 272 0 130 chr10 59860174 59860266 -80456499 - MER5B DNA MER1_type -98 80 1 182 111 0 0 chr10 59860870 59860897 -80455868 - L2 LINE L2 -14 3258 3232 234 0 0 0 chr10 59861257 59861283 -80455482 + (A)n Simple_repeat Simple_repeat 1 26 0 204 171 24 0 chr10 59861999 59862040 -80454725 + (TA)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr10 59863084 59863106 -80453659 + GC_rich Low_complexity Low_complexity 1 22 0 1134 237 60 38 chr10 59864072 59864520 -80452245 + LTR37B LTR ERV1 9 466 -2 219 167 0 0 chr10 59865996 59866032 -80450733 - L2 LINE L2 -69 3203 3168 24 85 0 0 chr10 59866037 59866096 -80450669 + AT_rich Low_complexity Low_complexity 1 59 0 473 254 216 14 chr10 59866327 59866540 -80450225 + MIR SINE MIR 6 261 -1 22 35 0 0 chr10 59866555 59866584 -80450181 + AT_rich Low_complexity Low_complexity 1 29 0 223 236 56 28 chr10 59867829 59867901 -80448864 + L2 LINE L2 2873 2946 -368 285 227 45 45 chr10 59867968 59868078 -80448687 + L2 LINE L2 3094 3203 -110 1194 87 77 0 chr10 59868093 59868276 -80448489 - MER30 DNA MER1_type -33 197 1 304 336 28 0 chr10 59868278 59868385 -80448380 + L2 LINE L2 3199 3308 -5 347 276 64 39 chr10 59868566 59868722 -80448043 + MER117 DNA MER1_type 1 160 -37 2188 118 0 0 chr10 59868895 59869192 -80447573 - AluSc SINE Alu -12 297 1 609 343 121 13 chr10 59869370 59869767 -80446998 - L3 LINE CR1 -355 1222 783 2458 70 0 0 chr10 59869911 59870213 -80446552 - AluY SINE Alu -9 302 1 837 289 106 49 chr10 59870972 59871443 -80445322 - MLT1H1 LTR MaLR -57 498 1 6495 147 49 7 chr10 59871595 59872772 -80443993 - Tigger3b DNA MER2_type -4 1227 1 21 0 0 0 chr10 59874040 59874061 -80442704 + AT_rich Low_complexity Low_complexity 1 21 0 320 300 65 55 chr10 59874130 59874315 -80442450 + MIR3 SINE MIR 8 199 -9 330 182 0 0 chr10 59874385 59874451 -80442314 + GA-rich Low_complexity Low_complexity 3 68 0 25 31 0 0 chr10 59875056 59875088 -80441677 + AT_rich Low_complexity Low_complexity 1 32 0 332 209 0 23 chr10 59875587 59875673 -80441092 - L1MC5 LINE L1 -45 7916 7833 1587 201 26 67 chr10 59875690 59876176 -80440589 - MER110A LTR ERV1 0 468 44 227 206 73 0 chr10 59876176 59876244 -80440521 - MER110A LTR ERV1 -395 73 1 1785 235 206 0 chr10 59877236 59877742 -80439023 + Zaphod DNA AcHobo 1 610 -3421 230 171 0 0 chr10 59877830 59877871 -80438894 + Zaphod DNA AcHobo 623 663 -3368 2544 198 95 38 chr10 59877872 59878580 -80438185 + Zaphod DNA AcHobo 3284 4031 0 584 304 63 81 chr10 59878706 59879041 -80437724 - MER102b DNA MER1_type -11 330 2 309 227 0 34 chr10 59879141 59879229 -80437536 + CT-rich Low_complexity Low_complexity 1 85 0 1125 197 79 55 chr10 59879694 59879984 -80436781 - AluJo SINE Alu -3 299 3 233 308 140 28 chr10 59880537 59880680 -80436085 - L3b LINE CR1 -146 1437 1279 481 287 57 6 chr10 59880709 59880866 -80435899 - MIR3 SINE MIR 0 208 44 945 197 23 163 chr10 59880927 59881405 -80435360 + MLT2D LTR ERVL 1 411 -3 1630 227 20 6 chr10 59882714 59883071 -80433694 + MLT1A2 LTR MaLR 8 369 -5 23 54 0 0 chr10 59884924 59884961 -80431804 + AT_rich Low_complexity Low_complexity 1 37 0 326 324 119 56 chr10 59885102 59885268 -80431497 + L2 LINE L2 2836 2990 -282 342 0 0 0 chr10 59885268 59885306 -80431459 + (TG)n Simple_repeat Simple_repeat 1 38 0 326 324 119 56 chr10 59885306 59885550 -80431215 + L2 LINE L2 2990 3272 0 536 313 22 11 chr10 59885830 59886009 -80430756 - MIR SINE MIR -54 208 28 330 64 0 0 chr10 59886726 59886773 -80429992 - MADE1 DNA Mariner -33 47 1 236 223 179 61 chr10 59886773 59887002 -80429763 + L1ME4a LINE L1 5720 5975 -146 192 264 38 0 chr10 59887696 59887749 -80429016 - MIR SINE MIR -174 88 34 427 298 118 65 chr10 59888077 59888449 -80428316 - MLT1K LTR MaLR -11 577 186 1041 201 124 50 chr10 59888504 59888683 -80428082 - MLT1B LTR MaLR 0 390 226 351 44 0 0 chr10 59888683 59888728 -80428037 + (GA)n Simple_repeat Simple_repeat 1 45 0 1041 201 124 50 chr10 59888728 59888911 -80427854 - MLT1B LTR MaLR -164 226 1 1661 173 7 0 chr10 59889537 59889815 -80426950 - AluJo SINE Alu -32 280 1 242 276 0 0 chr10 59890638 59890696 -80426069 + (TG)n Simple_repeat Simple_repeat 1 58 0 29 0 0 0 chr10 59891037 59891066 -80425699 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 59891521 59891544 -80425221 + AT_rich Low_complexity Low_complexity 1 23 0 528 278 40 26 chr10 59893353 59893504 -80423261 + MIR3 SINE MIR 17 169 -39 521 309 72 27 chr10 59893674 59893936 -80422829 - Charlie8 DNA MER1_type -2141 276 3 2920 238 66 10 chr10 59894062 59894991 -80421774 - L1M4 LINE L1 -2817 3329 2349 1326 236 67 25 chr10 59895665 59896305 -80420460 - L1ME LINE L1 -515 5720 5011 1083 265 33 23 chr10 59896337 59896644 -80420121 + LTR40a LTR ERVL 5 264 -201 1407 228 100 25 chr10 59896714 59897202 -80419563 - L1ME LINE L1 -5300 1096 572 4585 168 11 7 chr10 59897202 59898050 -80418715 - L1PB4 LINE L1 -1 6155 5301 4126 154 24 1 chr10 59898050 59898725 -80418040 - L1PA15 LINE L1 0 6165 5476 2976 65 5 0 chr10 59898738 59899122 -80417643 - L1PA7 LINE L1 0 6154 5769 3037 130 6 11 chr10 59899129 59899161 -80417604 - L1PA15 LINE L1 -654 5497 5466 7358 40 3 3 chr10 59899161 59900200 -80416565 - L1PA5 LINE L1 -7 6147 5108 3037 130 6 11 chr10 59900200 59900946 -80415819 - L1PA15 LINE L1 -685 5466 4728 * 3781 193 31 6 chr10 59900937 59901768 -80414997 - L1 LINE L1 -807 5339 4488 1839 183 35 39 chr10 59901841 59902273 -80414492 - L1MB7 LINE L1 -98 6086 5657 1740 233 83 14 chr10 59902286 59902873 -80413892 - L1MB7 LINE L1 -743 5403 4776 1795 236 29 4 chr10 59903169 59903657 -80413108 - L1MB7 LINE L1 -1381 4765 4266 21 36 0 0 chr10 59903748 59903776 -80412989 + AT_rich Low_complexity Low_complexity 1 28 0 1874 162 3 0 chr10 59903823 59904107 -80412658 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr10 59904107 59904133 -80412632 + AT_rich Low_complexity Low_complexity 1 26 0 476 297 75 23 chr10 59904257 59904497 -80412268 + L1MC5 LINE L1 6618 6870 -938 22 0 0 0 chr10 59904502 59904524 -80412241 + AT_rich Low_complexity Low_complexity 1 22 0 1080 291 97 44 chr10 59904573 59906280 -80410485 + L1ME LINE L1 68 1842 -4238 382 165 116 54 chr10 59906383 59906607 -80410158 + L1ME LINE L1 1850 2087 -3993 238 310 0 0 chr10 59906614 59906701 -80410064 + L1ME LINE L1 2173 2259 -4002 2190 116 7 10 chr10 59906701 59907011 -80409754 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr10 59907095 59907126 -80409639 + AT_rich Low_complexity Low_complexity 1 31 0 666 257 17 17 chr10 59907187 59907428 -80409337 + L1ME LINE L1 3673 3913 -2167 23 0 0 0 chr10 59907490 59907513 -80409252 + AT_rich Low_complexity Low_complexity 1 23 0 400 281 45 75 chr10 59907524 59907816 -80408949 - L1ME1 LINE L1 -6 6160 5878 2674 136 54 16 chr10 59907824 59908324 -80408441 - L1MA6 LINE L1 0 6300 5782 234 150 0 0 chr10 59908324 59908364 -80408401 + (TA)n Simple_repeat Simple_repeat 1 40 0 232 261 11 0 chr10 59908366 59908454 -80408311 + L1MC4 LINE L1 6615 6703 -1339 1231 139 0 0 chr10 59908495 59908696 -80408069 - L1MA6 LINE L1 -507 5793 5593 39698 75 8 5 chr10 59908727 59914864 -80401901 - L1PA5 LINE L1 -2 6152 1 1744 157 0 3 chr10 59914865 59915158 -80401607 - L1MA6 LINE L1 -686 5614 5323 * 11356 174 26 9 chr10 59915157 59920665 -80396100 + L1MA2 LINE L1 1789 7477 -246 2785 206 97 21 chr10 59920655 59921448 -80395317 + L1MB2 LINE L1 3195 4047 -2099 * 3175 171 30 16 chr10 59921448 59922090 -80394675 + L1MB2 LINE L1 5514 6164 -7 204 40 0 0 chr10 59922134 59922159 -80394606 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 26 0 0 0 chr10 59922398 59922424 -80394341 + AT_rich Low_complexity Low_complexity 1 26 0 38851 35 1 5 chr10 59922424 59927981 -80388784 - L1PA3 LINE L1 -3 6152 617 347 337 16 27 chr10 59928243 59928430 -80388335 - L1MEc LINE L1 -6173 223 39 402 296 28 39 chr10 59928460 59928639 -80388126 + L2 LINE L2 3136 3312 -1 324 298 0 55 chr10 59928773 59928954 -80387811 + A-rich Low_complexity Low_complexity 2 172 0 189 0 0 0 chr10 59930597 59930618 -80386147 + (TAGA)n Simple_repeat Simple_repeat 2 22 0 196 93 70 0 chr10 59930694 59930737 -80386028 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1256 186 55 0 chr10 59931449 59931702 -80385063 + MER58B DNA MER1_type 72 338 -3 467 219 58 80 chr10 59931757 59931894 -80384871 - MLT1K LTR MaLR -1 587 454 186 43 0 0 chr10 59932693 59932716 -80384049 + (TG)n Simple_repeat Simple_repeat 1 23 0 195 139 0 0 chr10 59932716 59932752 -80384013 + (GA)n Simple_repeat Simple_repeat 2 37 0 480 35 0 0 chr10 59932752 59932810 -80383955 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 442 309 61 97 chr10 59934236 59934744 -80382021 + MLT1K LTR MaLR 67 556 -32 23 0 0 0 chr10 59935591 59935614 -80381151 + AT_rich Low_complexity Low_complexity 1 23 0 393 329 42 42 chr10 59936418 59936634 -80380131 + MIR SINE MIR 11 226 -36 208 289 124 10 chr10 59937057 59937154 -80379611 + MER5B DNA MER1_type 4 111 -67 566 285 26 0 chr10 59937294 59937445 -80379320 - MIR SINE MIR -103 159 5 1285 279 72 8 chr10 59938877 59939268 -80377497 + LTR16C LTR ERVL 74 489 -2 323 316 0 0 chr10 59939445 59939543 -80377222 + L1M3b LINE L1 617 714 -5567 189 74 0 0 chr10 59939551 59939578 -80377187 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 12932 200 23 32 chr10 59939607 59943084 -80373681 + L1ME LINE L1 2126 5578 -804 4939 190 33 21 chr10 59943089 59944530 -80372235 + L1MA7 LINE L1 4171 5647 -644 1461 191 45 31 chr10 59944530 59944818 -80371947 - AluJo SINE Alu -20 292 1 4939 190 33 21 chr10 59944818 59945458 -80371307 + L1MA7 LINE L1 5647 6278 -13 186 360 94 51 chr10 59945821 59946096 -80370669 - L2 LINE L2 -407 2907 2621 341 319 50 0 chr10 59946156 59946275 -80370490 + L2 LINE L2 3189 3313 0 1416 141 45 64 chr10 59946394 59946706 -80370059 + MER44D DNA MER2_type 1 576 -33 2391 32 7 4 chr10 59947031 59947339 -80369426 + AluY SINE Alu 1 309 0 409 291 86 32 chr10 59947370 59947562 -80369203 - MIR SINE MIR 0 262 60 583 272 59 12 chr10 59947806 59948062 -80368703 + L1ME LINE L1 5728 5992 -365 357 344 0 38 chr10 59948095 59948255 -80368510 - L2 LINE L2 -1 3271 3118 696 244 89 23 chr10 59948922 59949180 -80367585 - L1ME2 LINE L1 -335 5829 5555 2509 70 0 0 chr10 59950891 59951191 -80365574 - AluY SINE Alu -7 304 5 1030 161 35 100 chr10 59951647 59951818 -80364947 + MLT1D LTR MaLR 5 155 -350 2217 86 0 7 chr10 59951818 59952109 -80364656 - AluSc SINE Alu -20 289 1 1030 161 35 100 chr10 59952109 59952197 -80364568 + MLT1D LTR MaLR 155 247 -258 1351 31 0 0 chr10 59952644 59952806 -80363959 + L1PA4 LINE L1 5990 6151 -4 2161 110 10 0 chr10 59953319 59953658 -80363107 + AluSx SINE Alu 1 312 0 630 296 62 25 chr10 59954557 59954800 -80361965 - MIR SINE MIR 0 262 11 2492 51 0 0 chr10 59955452 59955746 -80361019 - AluY SINE Alu -17 294 1 1562 153 15 11 chr10 59956115 59956383 -80360382 - AluJb SINE Alu -28 284 16 294 29 0 0 chr10 59957273 59957308 -80359457 + (TG)n Simple_repeat Simple_repeat 2 36 0 1640 110 13 84 chr10 59957315 59957623 -80359142 - AluSx SINE Alu -26 286 1 765 313 183 1 chr10 59957840 59958483 -80358282 - L2 LINE L2 -19 3294 2538 3895 184 41 46 chr10 59958844 59960202 -80356563 - L1MB8 LINE L1 0 6178 4827 26 50 0 0 chr10 59960205 59960245 -80356520 + AT_rich Low_complexity Low_complexity 1 40 0 416 300 29 14 chr10 59960456 59960596 -80356169 - MIR SINE MIR -4 258 117 246 316 195 8 chr10 59960704 59960879 -80355886 - MIR SINE MIR -21 187 18 183 328 141 0 chr10 59960977 59961041 -80355724 + MIR SINE MIR 74 146 -62 387 215 173 37 chr10 59962070 59962284 -80354481 + L1ME4a LINE L1 5879 6121 0 722 59 0 10 chr10 59963382 59963483 -80353282 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 4711 206 126 108 chr10 59966351 59968543 -80348222 + L1MCa LINE L1 4 2235 -4191 3901 197 81 77 chr10 59968549 59968835 -80347930 + L1MC3 LINE L1 5544 5827 -1958 2090 185 38 17 chr10 59968835 59969311 -80347454 + L1MB4 LINE L1 5690 6175 -5 3901 197 81 77 chr10 59969311 59970511 -80346254 + L1MC3 LINE L1 5827 7036 -749 29423 116 17 24 chr10 59970528 59976177 -80340588 + L1PA7 LINE L1 10 5718 -743 3454 65 2 13 chr10 59976182 59976644 -80340121 + L1PA7 LINE L1 6010 6466 -3 255 277 12 12 chr10 59976717 59976800 -80339965 + MLT1F1 LTR MaLR 35 117 -450 2501 183 41 29 chr10 59976801 59977047 -80339718 + L1MC3 LINE L1 7182 7424 -361 1929 107 10 31 chr10 59977047 59977365 -80339400 + AluSq SINE Alu 1 312 0 2501 183 41 29 chr10 59977365 59977708 -80339057 + L1MC3 LINE L1 7424 7779 -6 246 309 11 112 chr10 59978214 59978402 -80338363 - L2 LINE L2 -208 3064 2896 219 143 20 61 chr10 59978934 59978983 -80337782 - L2 LINE L2 0 3313 3267 727 265 148 15 chr10 59978999 59979324 -80337441 - MLT1J2 LTR MaLR 0 450 83 2049 155 40 0 chr10 59980935 59981284 -80335481 - THE1B LTR MaLR 0 364 2 1171 143 14 38 chr10 59981728 59981937 -80334828 + Tigger3(Golem) DNA MER2_type 2825 3028 -1 180 0 0 0 chr10 59982043 59982063 -80334702 + (CA)n Simple_repeat Simple_repeat 2 21 0 335 337 80 12 chr10 59982237 59982400 -80334365 - MIR3 SINE MIR -11 197 24 237 56 42 69 chr10 59982441 59982513 -80334252 + (CATTA)n Simple_repeat Simple_repeat 4 73 0 2055 129 0 0 chr10 59982550 59982828 -80333937 + AluSx SINE Alu 6 283 -29 198 360 0 22 chr10 59982887 59982976 -80333789 - MER5A DNA MER1_type -83 106 20 250 267 40 50 chr10 59984012 59984113 -80332652 - MIR3 SINE MIR -19 189 90 205 363 53 9 chr10 59984953 59985066 -80331699 - L3b LINE CR1 -197 1386 1269 319 253 69 87 chr10 59985780 59986129 -80330636 + L1ME4a LINE L1 5674 6016 -105 1235 192 93 126 chr10 59986216 59986859 -80329906 + MLT1E3 LTR MaLR 8 624 0 423 311 142 14 chr10 59987104 59987316 -80329449 - L3 LINE CR1 -32 1545 1307 406 336 205 21 chr10 59987750 59987909 -80328856 - L3 LINE CR1 -2 1575 1446 2820 113 70 28 chr10 59987909 59988449 -80328316 - L1MA8 LINE L1 0 6291 5729 406 336 205 21 chr10 59988449 59988616 -80328149 - L3 LINE CR1 -131 1446 1189 333 47 0 0 chr10 59988648 59988691 -80328074 + (TG)n Simple_repeat Simple_repeat 1 43 0 2534 155 6 21 chr10 59988843 59989320 -80327445 + L1MA7 LINE L1 5817 6286 -5 1946 160 21 19 chr10 59989573 59989947 -80326818 - THE1C LTR MaLR 0 375 1 2366 100 3 0 chr10 59990435 59990746 -80326019 - AluSp SINE Alu -1 312 1 6780 58 15 4 chr10 59990746 59991764 -80325001 - L1PA8 LINE L1 -3 6169 5127 361 239 86 150 chr10 59991935 59992261 -80324504 + MLT1H1 LTR MaLR 62 366 -189 1244 142 33 84 chr10 59992348 59992386 -80324379 - MER93b LTR ERV1 0 373 335 1586 103 4 50 chr10 59992386 59992647 -80324118 + L1PA10 LINE L1 5915 6163 -5 1244 142 33 84 chr10 59992647 59992883 -80323882 - MER93b LTR ERV1 -38 335 113 455 139 23 0 chr10 59993073 59993159 -80323606 + L1MD2 LINE L1 6259 6346 -13 2049 200 21 74 chr10 59993774 59994353 -80322412 - MLT2B3 LTR ERVL -6 548 1 274 279 8 101 chr10 59994397 59994526 -80322239 - MIR SINE MIR -83 179 63 261 245 160 19 chr10 59994837 59994943 -80321822 + MIR SINE MIR 23 143 -119 207 358 0 0 chr10 59995006 59995073 -80321692 - MER5A DNA MER1_type -48 141 75 24 53 0 0 chr10 59995573 59995611 -80321154 + AT_rich Low_complexity Low_complexity 1 38 0 207 0 0 0 chr10 59995909 59995932 -80320833 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2580 195 22 48 chr10 59996698 59997391 -80319374 + L1MA5 LINE L1 1361 2035 -4814 2808 103 92 9 chr10 59997406 59997851 -80318914 + LTR19C LTR ERV1 211 692 -87 243 61 0 0 chr10 59997880 59997913 -80318852 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 3982 193 77 18 chr10 59997915 59998041 -80318724 + L1MA5 LINE L1 2067 2184 -4664 2045 150 0 0 chr10 59998041 59998341 -80318424 + AluSx SINE Alu 1 300 -12 3982 193 77 18 chr10 59998341 60000093 -80316672 + L1MA5 LINE L1 2184 4059 -2789 4669 242 88 41 chr10 60000096 60001938 -80314827 - L1M2b LINE L1 -5281 1928 1 357 225 9 0 chr10 60001991 60002102 -80314663 + L1MA5 LINE L1 4057 4168 -2680 8298 167 49 11 chr10 60002216 60004982 -80311783 + L1MA5 LINE L1 4128 7002 0 710 364 98 24 chr10 60005411 60006005 -80310760 + L3 LINE CR1 228 865 -712 712 239 48 68 chr10 60006012 60006263 -80310502 + MIR SINE MIR 13 258 -4 222 343 59 10 chr10 60006295 60006397 -80310368 + L3 LINE CR1 900 1006 -571 23 54 0 0 chr10 60006817 60006854 -80309911 + AT_rich Low_complexity Low_complexity 1 37 0 7820 120 17 31 chr10 60006986 60008035 -80308730 + HSMAR2 DNA Mariner 2 1065 -237 4241 70 2 0 chr10 60008035 60008580 -80308185 + L1PA7 LINE L1 5598 6143 -11 7820 120 17 31 chr10 60008580 60008601 -80308164 + HSMAR2 DNA Mariner 1065 1085 -217 2184 116 0 10 chr10 60008601 60008904 -80307861 - AluSq SINE Alu -13 300 1 7820 120 17 31 chr10 60008904 60009151 -80307614 + HSMAR2 DNA Mariner 1085 1301 -1 456 256 102 23 chr10 60009161 60009337 -80307428 - L3 LINE CR1 -11 1566 1377 319 265 86 89 chr10 60009543 60009868 -80306897 - MER5C DNA MER1_type 0 324 1 21 36 0 0 chr10 60010550 60010578 -80306187 + AT_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr10 60011180 60011207 -80305558 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 60012302 60012330 -80304435 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 60012363 60012390 -80304375 + (T)n Simple_repeat Simple_repeat 1 27 0 11423 25 1 0 chr10 60013287 60015308 -80301457 - L1PA3 LINE L1 -148 6007 3985 296 279 15 0 chr10 60015310 60015378 -80301387 + L2 LINE L2 3203 3271 -1 207 114 0 0 chr10 60015533 60015568 -80301197 + (GA)n Simple_repeat Simple_repeat 1 35 0 202 235 118 0 chr10 60015702 60015770 -80300995 - L2 LINE L2 -37 3235 3160 189 0 0 0 chr10 60016661 60016682 -80300083 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 312 250 147 26 chr10 60017781 60017897 -80298868 - MIR3 SINE MIR -21 187 58 3513 181 26 15 chr10 60019201 60019921 -80296844 - L1MB8 LINE L1 -6 6172 5445 234 207 171 45 chr10 60020025 60020136 -80296629 + L2 LINE L2 3185 3309 -4 217 233 189 0 chr10 60020150 60020240 -80296525 - L2 LINE L2 -23 3290 3184 414 94 0 0 chr10 60020487 60020551 -80296214 + (TG)n Simple_repeat Simple_repeat 1 64 0 20349 71 2 2 chr10 60020807 60024333 -80292432 - L1PA6 LINE L1 -3 6151 2627 2263 154 42 7 chr10 60024441 60024917 -80291848 - L1P3 LINE L1 -5673 788 2 394 232 124 108 chr10 60025066 60025381 -80291384 - MLT1J2 LTR MaLR -125 325 6 1387 284 46 65 chr10 60026482 60026954 -80289811 - L2 LINE L2 -61 3252 2805 1997 165 6 15 chr10 60026954 60027294 -80289471 + MER1B DNA MER1_type 1 337 0 1387 284 46 65 chr10 60027294 60027583 -80289182 - L2 LINE L2 -508 2805 2512 952 213 0 0 chr10 60027584 60027758 -80289007 + AluJb SINE Alu 137 310 -2 304 200 0 0 chr10 60027758 60027818 -80288947 - L2 LINE L2 -795 2519 2460 716 305 81 24 chr10 60027820 60028190 -80288575 + MLT1I LTR MaLR 1 391 -18 1133 272 15 30 chr10 60028207 60028545 -80288220 - L2 LINE L2 -850 2464 2132 572 286 65 0 chr10 60028545 60028730 -80288035 - L2 LINE L2 -1413 1901 1705 407 294 94 56 chr10 60028831 60029064 -80287701 - MIR SINE MIR -6 256 2 1172 183 65 9 chr10 60029698 60029983 -80286782 - MLT1A1 LTR MaLR 0 365 1 946 251 0 5 chr10 60030744 60030947 -80285818 - MLT1A2 LTR MaLR 0 374 173 296 100 0 20 chr10 60030947 60030997 -80285768 + (GA)n Simple_repeat Simple_repeat 2 50 0 827 155 64 48 chr10 60030997 60031184 -80285581 - MLT1A2 LTR MaLR -184 190 1 375 248 0 40 chr10 60031306 60031407 -80285358 + MLT1K LTR MaLR 492 588 0 200 234 0 43 chr10 60032464 60032511 -80284254 + polypyrimidine Low_complexity Low_complexity 1 45 0 220 277 71 80 chr10 60032609 60032689 -80284076 + MIR SINE MIR 44 124 -138 1168 166 5 0 chr10 60032689 60032888 -80283877 + L1PB4 LINE L1 5947 6146 -10 220 277 71 80 chr10 60032888 60032919 -80283846 + MIR SINE MIR 124 154 -108 3092 188 55 6 chr10 60033388 60034010 -80282755 + L1MB7 LINE L1 5500 6151 -33 326 215 36 70 chr10 60034189 60034294 -80282471 - MIR SINE MIR -67 141 58 2663 147 45 2 chr10 60035478 60035926 -80280839 - LTR24 LTR ERV1 0 467 1 397 264 55 9 chr10 60035928 60036038 -80280727 - L2 LINE L2 -5 3267 3153 22 35 0 0 chr10 60036362 60036391 -80280374 + AT_rich Low_complexity Low_complexity 1 29 0 761 92 35 6 chr10 60036634 60036808 -80279957 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 60036808 60036832 -80279933 + AT_rich Low_complexity Low_complexity 1 24 0 832 76 5 38 chr10 60036832 60037017 -80279748 + (TA)n Simple_repeat Simple_repeat 2 180 0 456 150 0 0 chr10 60037275 60037355 -80279410 - MADE1 DNA Mariner 0 80 1 1705 203 62 23 chr10 60038065 60038084 -80278681 + L1MB8 LINE L1 5723 5740 -438 1191 147 82 147 chr10 60038084 60038581 -80278184 - MER4C LTR ERV1 0 465 1 1705 203 62 23 chr10 60038581 60038995 -80277770 + L1MB8 LINE L1 5740 6173 -5 250 309 62 10 chr10 60039612 60039709 -80277056 - MIR SINE MIR -67 141 40 466 364 138 4 chr10 60039802 60040027 -80276738 + MIR SINE MIR 8 262 0 292 325 9 9 chr10 60040129 60040243 -80276522 - L3 LINE CR1 -664 913 800 1860 167 38 24 chr10 60040849 60041190 -80275575 + MER7A DNA MER2_type 3 346 0 180 0 0 0 chr10 60041296 60041316 -80275449 + (CA)n Simple_repeat Simple_repeat 2 21 0 335 337 80 12 chr10 60041490 60041653 -80275112 - MIR3 SINE MIR -11 197 24 237 56 42 69 chr10 60041694 60041766 -80274999 + (CATTA)n Simple_repeat Simple_repeat 4 73 0 2047 129 0 0 chr10 60041803 60042081 -80274684 + AluSx SINE Alu 6 283 -29 199 360 0 22 chr10 60042140 60042229 -80274536 - MER5A DNA MER1_type -83 106 20 252 267 40 50 chr10 60043266 60043367 -80273398 - MIR3 SINE MIR -19 189 90 945 65 0 0 chr10 60043957 60044081 -80272684 + L1PA2 LINE L1 6031 6154 -1 1087 225 22 34 chr10 60044184 60044536 -80272229 - L1ME2 LINE L1 -103 6067 5723 222 296 114 45 chr10 60044601 60044733 -80272032 + MIR SINE MIR 20 160 -102 1688 223 56 29 chr10 60044812 60045261 -80271504 - MLT1C LTR MaLR 0 467 7 234 0 0 0 chr10 60046142 60046168 -80270597 + (A)n Simple_repeat Simple_repeat 1 26 0 195 42 0 0 chr10 60046631 60046655 -80270110 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1225 174 17 0 chr10 60046844 60047074 -80269691 - L1MB5 LINE L1 0 6174 5941 944 195 66 133 chr10 60047082 60047580 -80269185 - MER63D DNA MER1_type -462 599 4 204 262 115 0 chr10 60047704 60047765 -80269000 - MIR SINE MIR -107 155 88 183 339 0 15 chr10 60047919 60047984 -80268781 + MIR SINE MIR 16 79 -129 200 199 45 51 chr10 60048363 60048539 -80268226 + (TATAA)n Simple_repeat Simple_repeat 1 175 0 1071 133 0 0 chr10 60098908 60099073 -80217692 - MSTA LTR MaLR -263 165 1 668 333 43 55 chr10 60099082 60099676 -80217089 - L2 LINE L2 -252 3020 2433 2189 155 39 11 chr10 60099676 60100031 -80216734 + MLT1A1 LTR MaLR 1 365 0 668 333 43 55 chr10 60100031 60100100 -80216665 - L2 LINE L2 -839 2433 2365 354 369 44 5 chr10 60100214 60100420 -80216345 + L3 LINE CR1 1208 1421 -156 536 337 55 1 chr10 60100420 60100624 -80216141 - MIR SINE MIR -38 224 5 2287 67 3 34 chr10 60100797 60100908 -80215857 - L1PA8 LINE L1 -6 6166 6053 2919 3 0 0 chr10 60100908 60101218 -80215547 - AluY SINE Alu -1 310 1 2287 67 3 34 chr10 60101218 60101404 -80215361 - L1PA8 LINE L1 -119 6053 5878 237 65 0 0 chr10 60101425 60101456 -80215309 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 247 65 65 chr10 60102143 60102236 -80214529 + MIR SINE MIR 84 176 -86 476 335 31 0 chr10 60102851 60103012 -80213753 - MIR SINE MIR -1 261 96 2359 184 28 49 chr10 60103442 60104065 -80212700 + L1MD2 LINE L1 5102 5717 -642 1255 231 89 32 chr10 60104059 60104213 -80212552 + L1MD2 LINE L1 5967 6111 -248 * 234 0 0 0 chr10 60104213 60104239 -80212526 + (CA)n Simple_repeat Simple_repeat 2 27 0 1255 231 89 32 chr10 60104239 60104337 -80212428 + L1MD2 LINE L1 6111 6202 -157 2464 92 0 0 chr10 60104337 60104641 -80212124 + AluSx SINE Alu 1 304 -8 1255 231 89 32 chr10 60104641 60104759 -80212006 + L1MD2 LINE L1 6202 6359 0 192 303 0 101 chr10 60104996 60105085 -80211680 + MIR SINE MIR 20 99 -109 1318 191 40 117 chr10 60106064 60106467 -80210298 + MLT1A2 LTR MaLR 1 372 -2 1238 156 224 28 chr10 60107167 60107300 -80209465 - AluJo SINE Alu -2 300 194 218 0 94 0 chr10 60107300 60107332 -80209433 + T-rich Low_complexity Low_complexity 1 35 0 1238 156 224 28 chr10 60107332 60107448 -80209317 - AluJo SINE Alu -108 194 2 1087 235 32 0 chr10 60107955 60108172 -80208593 + MER58A DNA MER1_type 1 224 0 1779 148 15 107 chr10 60108187 60108347 -80208418 - MLT1A1 LTR MaLR -8 357 184 2283 92 6 13 chr10 60108347 60108662 -80208103 - AluSp SINE Alu 0 313 1 1779 148 15 107 chr10 60108662 60108894 -80207871 - MLT1A1 LTR MaLR -181 184 1 402 21 0 0 chr10 60108916 60108963 -80207802 + (CA)n Simple_repeat Simple_repeat 2 48 0 1992 181 14 32 chr10 60109445 60109815 -80206950 - MLT1A1 LTR MaLR -2 363 1 2251 101 3 19 chr10 60110039 60110347 -80206418 + AluSg SINE Alu 1 303 -7 2540 98 21 0 chr10 60110361 60110696 -80206069 + L1MA1 LINE L1 5957 6298 -4 2354 86 0 0 chr10 60110705 60110996 -80205769 + AluY SINE Alu 1 291 -20 3214 152 16 6 chr10 60111038 60111532 -80205233 + MER1A DNA MER1_type 31 529 0 2233 107 0 0 chr10 60111674 60111994 -80204771 + AluSx SINE Alu 1 320 0 2638 152 96 121 chr10 60112010 60112182 -80204583 - L1MC3 LINE L1 -21 7764 7589 1982 143 37 0 chr10 60112182 60112476 -80204289 + AluJo SINE Alu 6 310 -2 2638 152 96 121 chr10 60112476 60112888 -80203877 - L1MC3 LINE L1 -196 7589 7132 265 278 14 0 chr10 60112888 60112960 -80203805 - MLT1F1 LTR MaLR -444 123 51 2638 152 96 121 chr10 60112960 60113119 -80203646 - L1MC3 LINE L1 -653 7132 6970 315 242 118 13 chr10 60114397 60114550 -80202215 - L1ME4a LINE L1 -76 6045 5877 327 321 87 73 chr10 60114552 60115058 -80201707 - L1MC4a LINE L1 -137 7671 7154 1971 107 38 7 chr10 60115058 60115349 -80201416 - AluSx SINE Alu -12 300 1 327 321 87 73 chr10 60115349 60115455 -80201310 - L1MC4a LINE L1 -654 7154 7051 212 229 14 43 chr10 60116085 60116155 -80200610 - MIR SINE MIR -119 143 76 792 279 32 29 chr10 60116237 60116517 -80200248 + MLT1L LTR MaLR 197 477 -138 2052 91 73 0 chr10 60117271 60117545 -80199220 - AluSc SINE Alu -15 294 1 2145 152 20 3 chr10 60118261 60118610 -80198155 + MER57A LTR ERV1 1 355 -48 4172 132 25 25 chr10 60118902 60119537 -80197228 - MER41B LTR ERV1 0 635 1 195 129 0 0 chr10 60119572 60119603 -80197162 + (CAT)n Simple_repeat Simple_repeat 2 32 0 187 273 33 66 chr10 60119731 60119852 -80196913 - MIR SINE MIR -94 168 52 4444 89 40 3 chr10 60120044 60120650 -80196115 + L1PA14 LINE L1 5534 6161 0 538 205 102 19 chr10 60121920 60122135 -80194630 + Charlie5 DNA MER1_type 2391 2623 0 1712 110 64 36 chr10 60122464 60122745 -80194020 - AluJb SINE Alu -23 289 1 2128 121 7 0 chr10 60123196 60123485 -80193280 + AluSc SINE Alu 5 295 -14 573 292 71 22 chr10 60124113 60124339 -80192426 - MIR SINE MIR -14 248 12 196 282 45 64 chr10 60124684 60124794 -80191971 - MIR SINE MIR -125 137 30 4076 166 48 34 chr10 60124813 60125416 -80191349 + LTR39 LTR ERV1 1 619 -164 2008 159 0 7 chr10 60125416 60125718 -80191047 + AluSx SINE Alu 1 300 -12 4076 166 48 34 chr10 60125718 60125886 -80190879 + LTR39 LTR ERV1 619 783 0 367 282 149 37 chr10 60126287 60126528 -80190237 + L2 LINE L2 2472 2739 -575 501 130 0 0 chr10 60126725 60126817 -80189948 + MER53 DNA DNA 95 186 -3 949 243 38 4 chr10 60126821 60127084 -80189681 + L1ME2 LINE L1 5844 6115 -49 240 226 11 86 chr10 60127405 60127498 -80189267 + L2 LINE L2 3176 3261 -52 327 323 99 17 chr10 60127825 60128057 -80188708 + LTR33 LTR ERVL 1 251 -270 819 274 103 19 chr10 60128124 60128543 -80188222 - LTR16A LTR ERVL 0 457 4 238 234 43 21 chr10 60128590 60128684 -80188081 + LTR33 LTR ERVL 423 518 -3 372 43 0 0 chr10 60128684 60128730 -80188035 + (CA)n Simple_repeat Simple_repeat 2 47 0 465 275 77 69 chr10 60128732 60128964 -80187801 - L1MC4a LINE L1 -1929 5879 5641 1669 185 0 0 chr10 60128964 60129245 -80187520 - AluJb SINE Alu -3 309 29 465 275 77 69 chr10 60129245 60129401 -80187364 - L1MC4a LINE L1 -2167 5641 5488 316 294 104 45 chr10 60130454 60130660 -80186105 + MIR SINE MIR 1 212 -50 2962 230 126 79 chr10 60131064 60131913 -80184852 + L2 LINE L2 1773 2581 -732 1648 180 7 17 chr10 60131913 60132208 -80184557 + AluJo SINE Alu 1 292 -20 2962 230 126 79 chr10 60132208 60132502 -80184263 + L2 LINE L2 2581 2860 -453 7815 75 7 19 chr10 60132502 60133585 -80183180 - MER11C LTR ERVK 0 1071 1 2962 230 126 79 chr10 60133585 60133837 -80182928 + L2 LINE L2 2860 3215 -98 650 309 94 55 chr10 60134352 60134449 -80182316 + MLT1L LTR MaLR 44 136 -479 1754 180 7 7 chr10 60134449 60134738 -80182027 - AluJo SINE Alu -23 289 1 650 309 94 55 chr10 60134738 60135181 -80181584 + MLT1L LTR MaLR 136 605 -10 352 179 143 77 chr10 60135573 60135741 -80181024 + L1MC4a LINE L1 5256 5434 -2374 378 333 79 12 chr10 60135840 60136080 -80180685 + L1MC4a LINE L1 6336 6591 -1217 617 238 99 36 chr10 60136117 60136369 -80180396 + L1MC5 LINE L1 6652 6919 -1042 2585 96 16 0 chr10 60136480 60136865 -80179900 - L1M2 LINE L1 -550 5747 5357 561 147 17 52 chr10 60136866 60136982 -80179783 - FRAM SINE Alu -7 169 58 1499 250 25 0 chr10 60136983 60137303 -80179462 + L1M2c LINE L1 1234 1561 -5228 180 0 0 0 chr10 60137310 60137330 -80179435 + (TTATA)n Simple_repeat Simple_repeat 3 22 0 9720 200 28 13 chr10 60137330 60138214 -80178551 - L1 LINE L1 -1752 5036 4167 1975 147 30 0 chr10 60138214 60138513 -80178252 - AluSx SINE Alu -2 310 3 9720 200 28 13 chr10 60138513 60142903 -80173862 - L1 LINE L1 -2621 4167 14 373 250 36 0 chr10 60142961 60143045 -80173720 + LTR16A LTR ERVL 233 319 -131 410 309 27 0 chr10 60143070 60143180 -80173585 + L2 LINE L2 3158 3270 -2 244 189 19 0 chr10 60143456 60143509 -80173256 - LTR16A LTR ERVL -20 430 377 26 50 0 0 chr10 60143788 60143828 -80172937 + AT_rich Low_complexity Low_complexity 1 40 0 551 249 254 28 chr10 60144436 60144649 -80172116 - MIR SINE MIR 0 262 2 1908 183 0 0 chr10 60144784 60145079 -80171686 - AluSx SINE Alu -17 295 1 221 146 188 0 chr10 60146357 60146405 -80170360 + MIR SINE MIR 156 212 -50 25 31 0 0 chr10 60146556 60146588 -80170177 + AT_rich Low_complexity Low_complexity 1 32 0 479 341 6 18 chr10 60146615 60146785 -80169980 + MER5B DNA MER1_type 7 174 -4 228 35 0 0 chr10 60146934 60146963 -80169802 + (CA)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 60147375 60147399 -80169366 + AT_rich Low_complexity Low_complexity 1 24 0 2361 68 0 23 chr10 60148308 60148616 -80168149 + AluY SINE Alu 1 301 -10 617 327 14 9 chr10 60149962 60150176 -80166589 - MIR SINE MIR -37 225 11 2275 87 0 7 chr10 60150180 60150494 -80166271 + AluSc SINE Alu 1 309 0 889 98 8 0 chr10 60151840 60151963 -80164802 - L1PA10 LINE L1 -15 6153 6030 1445 222 33 0 chr10 60152154 60152483 -80164282 - MER58B DNA MER1_type -1 340 1 2278 146 68 54 chr10 60152976 60153586 -80163179 + MER4B LTR ERV1 1 778 -1 627 255 27 0 chr10 60153587 60153736 -80163029 - MIR SINE MIR -108 154 2 31 0 0 0 chr10 60154310 60154341 -80162424 + AT_rich Low_complexity Low_complexity 1 31 0 20206 95 31 32 chr10 60154553 60157525 -80159240 + L1PA7 LINE L1 2359 5333 -821 2141 129 13 0 chr10 60157525 60157834 -80158931 + AluSq SINE Alu 1 313 0 20206 95 31 32 chr10 60157834 60158248 -80158517 + L1PA7 LINE L1 5333 5776 -378 2368 115 0 3 chr10 60158248 60158562 -80158203 + AluSp SINE Alu 1 313 0 20206 95 31 32 chr10 60158562 60158937 -80157828 + L1PA7 LINE L1 5776 6150 -4 27 49 0 0 chr10 60159178 60159219 -80157546 + AT_rich Low_complexity Low_complexity 1 41 0 254 248 197 30 chr10 60160031 60160229 -80156536 + L1MC5 LINE L1 7701 7931 -30 2192 126 0 10 chr10 60161184 60161494 -80155271 + AluSx SINE Alu 1 307 -5 4023 206 139 36 chr10 60161545 60162864 -80153901 + Charlie1a DNA MER1_type 1 1455 0 281 297 67 0 chr10 60163737 60163851 -80152914 + MIR SINE MIR 76 206 -56 748 198 59 5 chr10 60164535 60164722 -80152043 + Charlie1 DNA MER1_type 1993 2189 -572 1613 118 4 4 chr10 60164725 60164954 -80151811 + AluSx SINE Alu 1 229 -83 309 224 24 0 chr10 60164978 60165063 -80151702 + Charlie1 DNA MER1_type 2174 2260 -501 254 344 66 13 chr10 60165365 60165516 -80151249 - MIR SINE MIR -30 232 74 460 288 88 94 chr10 60165558 60165744 -80151021 - MIR SINE MIR -63 145 3 328 220 68 76 chr10 60166186 60166304 -80150461 - MIR SINE MIR -66 196 80 282 262 38 71 chr10 60166409 60166592 -80150173 + MERVL LTR ERVL 1750 1926 -3559 424 228 218 78 chr10 60166919 60167125 -80149640 + MIR SINE MIR 26 260 -2 667 253 34 0 chr10 60168343 60168489 -80148276 + MIR SINE MIR 29 179 -83 276 304 0 0 chr10 60168639 60168708 -80148057 - MIR3 SINE MIR -31 177 109 295 165 165 13 chr10 60168813 60168892 -80147873 + L1ME3A LINE L1 5448 5538 -628 922 239 37 74 chr10 60168999 60169350 -80147415 + L1ME3A LINE L1 5809 6146 -24 374 342 34 20 chr10 60170305 60170454 -80146311 - MIR3 SINE MIR -6 202 52 3389 173 32 34 chr10 60170545 60171256 -80145509 + MER50 LTR ERV1 1 710 -24 2134 126 3 3 chr10 60171811 60172112 -80144653 + AluSx SINE Alu 1 301 -11 813 139 168 81 chr10 60172388 60172422 -80144343 - AluJo SINE Alu -123 189 159 21 0 0 0 chr10 60172422 60172443 -80144322 + AT_rich Low_complexity Low_complexity 1 21 0 761 169 0 8 chr10 60172443 60172561 -80144204 - FLAM_C SINE Alu -15 118 2 448 171 105 23 chr10 60172562 60172687 -80144078 - MER33 DNA MER1_type -262 62 1 1857 10 0 0 chr10 60173060 60173258 -80143507 - L1PA3 LINE L1 -4 6151 5954 2898 16 0 0 chr10 60173695 60174013 -80142752 - AluYb8 SINE Alu 0 318 1 1305 214 21 104 chr10 60174481 60174912 -80141853 - MLT2C1 LTR ERVL -2 395 1 353 310 6 57 chr10 60175836 60175869 -80140896 + MER5B DNA MER1_type 29 62 -116 1902 151 0 7 chr10 60175869 60176181 -80140584 + AluJb SINE Alu 1 310 0 353 310 6 57 chr10 60176181 60176304 -80140461 + MER5B DNA MER1_type 62 178 0 1312 27 13 37 chr10 60176569 60177057 -80139708 + (TATATG)n Simple_repeat Simple_repeat 1 476 0 419 293 32 0 chr10 60177170 60177293 -80139472 - MIR3 SINE MIR -46 162 36 690 187 114 42 chr10 60177368 60177534 -80139231 + MER45A DNA AcHobo 1 178 0 268 326 148 7 chr10 60178258 60178393 -80138372 - MIR3 SINE MIR -18 190 37 398 339 53 32 chr10 60178874 60179063 -80137702 + L2 LINE L2 3080 3272 0 21 0 0 0 chr10 60179702 60179723 -80137042 + AT_rich Low_complexity Low_complexity 1 21 0 761 232 152 39 chr10 60179829 60180139 -80136626 - LTR16A LTR ERVL -9 441 97 234 306 32 0 chr10 60180228 60180352 -80136413 - L1MC4a LINE L1 -1813 5995 5868 1159 248 145 60 chr10 60180443 60181140 -80135625 - L1MC4a LINE L1 -1636 6172 5417 676 112 10 0 chr10 60181140 60181238 -80135527 - AluSg/x SINE Alu -4 305 207 381 271 136 64 chr10 60181309 60181869 -80134896 - L1MC4a LINE L1 -1322 4824 4225 2085 95 15 4 chr10 60182102 60182375 -80134390 - AluSq SINE Alu -37 276 1 413 297 153 16 chr10 60182379 60182823 -80133942 - L1MC4a LINE L1 -1983 4163 3659 1797 167 26 3 chr10 60182855 60183160 -80133605 + AluJo SINE Alu 1 312 0 1012 165 6 11 chr10 60185203 60185379 -80131386 + AluJb SINE Alu 129 303 -9 2244 96 0 3 chr10 60185972 60186263 -80130502 + AluSx SINE Alu 1 290 -22 311 165 76 13 chr10 60187488 60187567 -80129198 + L1MB8 LINE L1 5498 5581 -603 985 187 0 21 chr10 60187567 60187754 -80129011 + L1MB7 LINE L1 5993 6175 -9 2230 64 11 4 chr10 60188781 60189087 -80127678 - AluY SINE Alu 0 308 1 2302 56 3 11 chr10 60189094 60189409 -80127356 - AluY SINE Alu 0 313 1 2087 124 7 0 chr10 60189690 60189973 -80126792 + AluSx SINE Alu 1 285 -27 210 191 0 0 chr10 60189973 60190015 -80126750 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 22 0 0 0 chr10 60190016 60190038 -80126727 + AT_rich Low_complexity Low_complexity 1 22 0 2386 147 29 36 chr10 60190072 60190515 -80126250 + L1MB8 LINE L1 5739 6178 0 342 206 0 0 chr10 60190537 60190610 -80126155 + L1ME1 LINE L1 6089 6161 -5 10229 28 0 178 chr10 60191237 60192964 -80123801 + SVA Other Other 1 1430 0 299 321 47 0 chr10 60192992 60193098 -80123667 + MIR SINE MIR 45 155 -107 183 114 0 0 chr10 60193133 60193168 -80123597 + (A)n Simple_repeat Simple_repeat 1 35 0 2122 97 3 21 chr10 60193903 60194191 -80122574 - AluSq SINE Alu -7 306 24 866 270 17 13 chr10 60194611 60194848 -80121917 + MIR SINE MIR 9 246 -16 366 23 0 0 chr10 60195072 60195115 -80121650 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 300 0 0 chr10 60197181 60197251 -80119514 + L2 LINE L2 3244 3313 0 1395 181 12 12 chr10 60198302 60198550 -80118215 - AluJb SINE Alu -24 288 41 673 245 20 103 chr10 60198799 60198884 -80117881 + Charlie8 DNA MER1_type 27 117 -224 2332 68 3 13 chr10 60198884 60199191 -80117574 - AluY SINE Alu -7 304 1 673 245 20 103 chr10 60199191 60199358 -80117407 + Charlie8 DNA MER1_type 117 258 -83 221 259 19 0 chr10 60199541 60199595 -80117170 - MIR3 SINE MIR -46 162 108 288 239 204 11 chr10 60200529 60200617 -80116148 + MIR SINE MIR 6 110 -152 22 35 0 0 chr10 60200678 60200707 -80116058 + AT_rich Low_complexity Low_complexity 1 29 0 1414 109 97 12 chr10 60201591 60201801 -80114964 + L1MA8 LINE L1 5561 5797 -494 207 0 0 0 chr10 60201801 60201824 -80114941 + (CA)n Simple_repeat Simple_repeat 2 24 0 1414 109 97 12 chr10 60201824 60201861 -80114904 + L1MA8 LINE L1 5797 5829 -462 2296 86 0 43 chr10 60201861 60202187 -80114578 + AluSx SINE Alu 1 312 0 924 138 7 7 chr10 60202224 60202369 -80114396 + AluJb SINE Alu 85 229 -83 878 90 15 0 chr10 60202403 60202536 -80114229 + (GGGAA)n Simple_repeat Simple_repeat 5 139 0 1526 131 54 74 chr10 60202541 60202892 -80113873 + L1MA8 LINE L1 5930 6273 -18 189 154 0 0 chr10 60205049 60205088 -80111677 + GA-rich Low_complexity Low_complexity 1 39 0 450 0 0 0 chr10 60205555 60205605 -80111160 + (CA)n Simple_repeat Simple_repeat 1 50 0 437 246 157 0 chr10 60206358 60206492 -80110273 + L1ME3A LINE L1 6007 6161 -9 2039 113 21 3 chr10 60206495 60206779 -80109986 - AluSx SINE Alu -23 289 1 266 249 62 20 chr10 60207124 60207275 -80109490 - Charlie8 DNA MER1_type 0 2417 173 1691 160 20 23 chr10 60208465 60208765 -80108000 - AluJo SINE Alu -13 299 1 416 278 30 15 chr10 60208773 60208906 -80107859 - MIR SINE MIR -108 154 20 520 288 23 28 chr10 60208971 60209148 -80107617 - MIR SINE MIR -69 193 18 265 203 54 27 chr10 60209349 60209423 -80107342 + L2 LINE L2 3191 3266 -6 1575 166 27 23 chr10 60210353 60210654 -80106111 - AluJo SINE Alu -10 302 1 45 75 0 0 chr10 60210755 60210849 -80105916 + AT_rich Low_complexity Low_complexity 1 94 0 291 325 101 12 chr10 60210889 60211058 -80105707 - LTR33 LTR ERVL -8 513 330 405 281 67 24 chr10 60211163 60211327 -80105438 - LTR33 LTR ERVL -328 193 23 442 228 364 0 chr10 60211359 60211521 -80105244 - MIR SINE MIR -36 226 6 714 202 0 0 chr10 60211554 60211663 -80105102 + FLAM_A SINE Alu 2 110 -32 180 0 0 0 chr10 60211673 60211693 -80105072 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1078 134 0 17 chr10 60211998 60212170 -80104595 + AluSg/x SINE Alu 135 303 -9 209 261 43 54 chr10 60212329 60212421 -80104344 - L2 LINE L2 -294 2978 2888 369 336 103 14 chr10 60212853 60212999 -80103766 - L2 LINE L2 -558 2756 2598 220 300 57 29 chr10 60213968 60214038 -80102727 - L3 LINE CR1 -12 1565 1494 196 315 0 0 chr10 60214026 60214080 -80102685 - MIR3 SINE MIR -54 154 101 * 598 247 170 0 chr10 60214088 60214282 -80102483 + MIR SINE MIR 9 235 -27 197 283 83 17 chr10 60215097 60215157 -80101608 + L2 LINE L2 3250 3313 0 2872 134 76 71 chr10 60215518 60216152 -80100613 + L1MB7 LINE L1 5548 6184 0 207 69 0 0 chr10 60216215 60216244 -80100521 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6114 126 33 7 chr10 60216244 60216545 -80100220 - L1PB1 LINE L1 -44 6107 5815 342 0 0 0 chr10 60216545 60216583 -80100182 + (TG)n Simple_repeat Simple_repeat 2 39 0 6114 126 33 7 chr10 60216583 60217819 -80098946 - L1PB1 LINE L1 -336 5815 4525 280 82 0 41 chr10 60217830 60217879 -80098886 + L1MB8 LINE L1 6132 6178 0 2204 117 0 13 chr10 60218113 60218420 -80098345 + AluSx SINE Alu 1 303 -9 2170 134 63 0 chr10 60218609 60218944 -80097821 - THE1B LTR MaLR -8 356 1 761 318 75 24 chr10 60218970 60219341 -80097424 + L2 LINE L2 2922 3311 -2 26 30 0 0 chr10 60220081 60220114 -80096651 + AT_rich Low_complexity Low_complexity 1 33 0 3856 97 6 14 chr10 60220227 60220742 -80096023 - MER9 LTR ERVK 0 511 1 284 274 84 130 chr10 60221017 60221232 -80095533 + MIR SINE MIR 18 222 -40 832 161 0 14 chr10 60221697 60221840 -80094925 - LTR2B LTR ERV1 0 490 350 772 236 27 73 chr10 60221836 60222095 -80094670 - LTR2 LTR ERV1 -202 247 1 * 37983 64 6 7 chr10 60222095 60227191 -80089574 - Harlequin LTR ERV1 0 6896 1807 7281 118 15 59 chr10 60227179 60228784 -80087981 - Harlequin LTR ERV1 -5474 1422 1 * 1948 190 68 32 chr10 60228784 60229227 -80087538 - LTR2B LTR ERV1 0 490 32 308 202 60 60 chr10 60229351 60229435 -80087330 - MIR SINE MIR -60 148 65 261 279 200 14 chr10 60229478 60229618 -80087147 - MER5A DNA MER1_type -6 183 18 309 308 103 0 chr10 60229707 60229824 -80086941 + L2 LINE L2 3143 3271 -1 491 264 239 0 chr10 60230186 60230383 -80086382 - MIR SINE MIR -17 245 2 394 248 58 44 chr10 60231151 60231288 -80085477 + MIR SINE MIR 53 191 -71 198 0 0 0 chr10 60231675 60231697 -80085068 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1579 166 0 50 chr10 60231700 60232001 -80084764 - AluJb SINE Alu -26 286 1 2333 100 0 10 chr10 60234033 60234343 -80082422 + AluSg SINE Alu 1 307 -3 2032 150 23 48 chr10 60234470 60234823 -80081942 + MER2 DNA MER2_type 1 344 0 5483 114 49 74 chr10 60234934 60235005 -80081760 + Tigger3b DNA MER2_type 1 72 -2956 2321 95 0 0 chr10 60235005 60235299 -80081466 + AluSg1 SINE Alu 1 294 -15 5483 114 49 74 chr10 60235299 60235976 -80080789 + Tigger3b DNA MER2_type 72 720 -2308 2051 137 3 6 chr10 60235976 60236289 -80080476 - AluSx SINE Alu 0 312 1 5483 114 49 74 chr10 60236289 60236544 -80080221 + Tigger3b DNA MER2_type 720 980 -251 1432 165 8 27 chr10 60236544 60236566 -80080199 - AluJo SINE Alu 0 312 291 1850 178 0 10 chr10 60236566 60236875 -80079890 - AluJb SINE Alu -6 306 1 1432 165 8 27 chr10 60236875 60237113 -80079652 - AluJo SINE Alu -21 291 57 400 235 108 10 chr10 60237114 60237216 -80079549 - FRAM SINE Alu -60 116 5 636 259 134 9 chr10 60237256 60237488 -80079277 + L1ME4a LINE L1 5615 5875 -295 435 23 46 46 chr10 60237839 60237926 -80078839 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 1631 181 17 7 chr10 60237934 60238221 -80078544 - AluJo SINE Alu -22 290 1 266 207 11 103 chr10 60238277 60238364 -80078401 + L1ME4a LINE L1 5968 6046 -75 9754 64 10 79 chr10 60238856 60240300 -80076465 + SVA Other Other 26 1369 -17 206 81 27 0 chr10 60240305 60240342 -80076423 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 203 167 0 0 chr10 60241088 60241130 -80075635 + A-rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr10 60241343 60241373 -80075392 + AT_rich Low_complexity Low_complexity 1 30 0 303 167 19 0 chr10 60241514 60241568 -80075197 - MIR SINE MIR -1 261 207 2124 89 0 25 chr10 60242010 60242291 -80074474 - AluSp SINE Alu -39 274 1 23 0 0 0 chr10 60242301 60242324 -80074441 + AT_rich Low_complexity Low_complexity 1 23 0 683 240 124 9 chr10 60242456 60242681 -80074084 + MIR SINE MIR 10 260 -2 236 303 156 55 chr10 60242774 60243012 -80073753 + L2 LINE L2 2992 3253 -19 21 0 0 0 chr10 60243124 60243145 -80073620 + AT_rich Low_complexity Low_complexity 1 21 0 327 271 113 45 chr10 60243817 60243950 -80072815 - MIR3 SINE MIR -28 180 39 357 280 96 28 chr10 60244180 60244352 -80072413 + MIR SINE MIR 4 185 -58 426 297 57 24 chr10 60244367 60244576 -80072189 - MIR SINE MIR -45 217 2 1940 124 60 17 chr10 60244603 60244902 -80071863 + AluSx SINE Alu 1 312 0 2449 85 7 0 chr10 60245254 60245561 -80071204 - AluSq SINE Alu -4 309 1 380 309 17 29 chr10 60246224 60246399 -80070366 - MARNA DNA Mariner -169 417 245 188 347 0 0 chr10 60246433 60246482 -80070283 + L2 LINE L2 3203 3251 -21 2014 112 10 35 chr10 60246570 60246882 -80069883 + AluJb SINE Alu 1 304 -8 193 200 0 44 chr10 60246951 60246996 -80069769 + L2 LINE L2 3257 3299 -14 472 229 8 33 chr10 60247603 60247725 -80069040 - MIR SINE MIR -109 153 35 180 97 0 0 chr10 60248510 60248541 -80068224 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1485 81 0 20 chr10 60248882 60249080 -80067685 + L1PA6 LINE L1 5961 6154 0 1811 168 0 10 chr10 60249611 60249914 -80066851 + AluJb SINE Alu 1 300 -12 1477 181 51 34 chr10 60249963 60250256 -80066509 - AluJo SINE Alu -14 298 1 409 168 70 60 chr10 60250523 60250734 -80066031 - Charlie7 DNA MER1_type -40 2572 8 1849 201 45 14 chr10 60250778 60251200 -80065565 + MLT1C LTR MaLR 1 435 -32 405 200 29 71 chr10 60251233 60251403 -80065362 + MER31-int LTR ERV1 1287 1449 -3487 444 236 52 35 chr10 60251567 60251741 -80065024 + MER31-int LTR ERV1 1679 1855 -3081 656 239 32 78 chr10 60251956 60252466 -80064299 + MER31-int LTR ERV1 2211 2686 -2250 2648 189 76 144 chr10 60252480 60253667 -80063098 + MER31-int LTR ERV1 3120 4386 -550 1528 151 159 8 chr10 60253667 60253856 -80062909 - AluJo SINE Alu 0 321 162 2174 94 0 58 chr10 60253856 60253923 -80062842 - AluY SINE Alu 0 311 242 230 0 33 0 chr10 60253923 60253953 -80062812 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2174 94 0 58 chr10 60253953 60254215 -80062550 - AluY SINE Alu -69 242 1 1528 151 159 8 chr10 60254215 60254308 -80062457 - AluJo SINE Alu -159 162 1 2648 189 76 144 chr10 60254308 60254338 -80062427 + MER31-int LTR ERV1 4385 4247 -689 457 194 79 65 chr10 60254341 60254480 -80062285 + LTR37A LTR ERV1 1 141 -285 3725 122 4 4 chr10 60255137 60255647 -80061118 + MER9 LTR ERVK 1 510 -1 2320 123 32 56 chr10 60255859 60255907 -80060858 - L1MB2 LINE L1 -2 6169 6121 2105 118 6 41 chr10 60255907 60256221 -80060544 - AluSx SINE Alu -9 303 1 2320 123 32 56 chr10 60256221 60256604 -80060161 - L1MB2 LINE L1 -50 6121 5748 1821 194 45 3 chr10 60256604 60256959 -80059806 + MER92B LTR ERV1 1 370 -266 496 208 50 0 chr10 60256984 60257104 -80059661 + MER92B LTR ERV1 510 635 -1 2370 91 0 13 chr10 60257187 60257485 -80059280 - AluSx SINE Alu -18 294 1 256 352 33 0 chr10 60257499 60257590 -80059175 - MIR SINE MIR -113 149 56 2000 188 154 26 chr10 60257766 60258260 -80058505 - MER89 LTR ERV1 0 559 3 1785 136 7 4 chr10 60258502 60258774 -80057991 - AluJb SINE Alu -6 306 34 314 335 20 70 chr10 60259034 60259234 -80057531 + L2 LINE L2 2926 3115 -157 726 256 19 0 chr10 60259647 60259803 -80056962 + MIR SINE MIR 58 216 -46 2244 69 14 0 chr10 60259867 60260168 -80056597 - AluY SINE Alu 0 309 5 2006 116 0 0 chr10 60260228 60260505 -80056260 - MER9 LTR ERVK -234 277 1 22434 63 2 0 chr10 60260505 60263229 -80053536 - Harlequin LTR ERV1 -905 5991 3263 716 90 20 0 chr10 60263225 60263325 -80053440 + Harlequin LTR ERV1 4429 4530 -2366 * 10740 76 25 10 chr10 60263287 60264504 -80052261 - Harlequin LTR ERV1 -3608 3288 2044 225 65 0 0 chr10 60264504 60264535 -80052230 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 10740 76 25 10 chr10 60264535 60264777 -80051988 - Harlequin LTR ERV1 -4852 2044 1807 4929 132 62 43 chr10 60264761 60266226 -80050539 - Harlequin LTR ERV1 -3668 4117 1 * 2046 180 105 31 chr10 60266226 60266682 -80050083 - LTR2B LTR ERV1 0 490 1 200 274 0 0 chr10 60266706 60266757 -80050008 - L2 LINE L2 -12 3260 3210 198 312 65 21 chr10 60266762 60266855 -80049910 - MIR SINE MIR -93 115 19 217 304 194 55 chr10 60268086 60268287 -80048478 - MIR SINE MIR 0 262 34 23 0 0 0 chr10 60268336 60268359 -80048406 + AT_rich Low_complexity Low_complexity 1 23 0 2350 120 3 43 chr10 60268557 60268907 -80047858 + MER1B DNA MER1_type 1 336 -1 2080 109 16 20 chr10 60269929 60270232 -80046533 + AluSx SINE Alu 1 302 -10 252 0 0 0 chr10 60270248 60270276 -80046489 + (TC)n Simple_repeat Simple_repeat 1 28 0 * 396 0 0 0 chr10 60270275 60270319 -80046446 + (CA)n Simple_repeat Simple_repeat 1 44 0 3128 105 12 0 chr10 60270935 60271354 -80045411 + L1PA13 LINE L1 5737 6160 -3 520 270 33 33 chr10 60271392 60271603 -80045162 - L1MC5 LINE L1 -44 7917 7707 2379 88 73 32 chr10 60271787 60272128 -80044637 - THE1A LTR MaLR 0 355 1 12758 87 1 5 chr10 60272128 60273711 -80043054 - THE1A-int LTR MaLR 0 1580 4 2877 90 3 0 chr10 60273714 60274068 -80042697 - THE1A LTR MaLR 0 355 1 1689 196 3 0 chr10 60274320 60274616 -80042149 + AluJb SINE Alu 1 297 -15 283 188 35 47 chr10 60274637 60274722 -80042043 - L1MC5 LINE L1 -269 7692 7609 405 248 129 0 chr10 60275029 60275130 -80041635 + MIR SINE MIR 13 126 -136 548 235 22 0 chr10 60275680 60275816 -80040949 - MER63B DNA MER1_type 0 435 297 1201 223 33 60 chr10 60275816 60276127 -80040638 - MER63B DNA MER1_type -699 363 45 2095 102 3 7 chr10 60276127 60276412 -80040353 + AluSg SINE Alu 2 285 -25 414 0 0 0 chr10 60276418 60276464 -80040301 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1201 223 33 60 chr10 60276464 60276512 -80040253 - MER63B DNA MER1_type -1022 40 7 321 279 81 22 chr10 60276885 60277021 -80039744 - Charlie8 DNA MER1_type -2199 218 75 2420 86 3 0 chr10 60277021 60277323 -80039442 + AluSp SINE Alu 1 303 -10 506 299 126 26 chr10 60277569 60277840 -80038925 + LTR16C LTR ERVL 164 461 -30 193 354 24 24 chr10 60278031 60278113 -80038652 + L2 LINE L2 3164 3245 -27 12492 30 0 1 chr10 60278122 60279580 -80037185 - L1P LINE L1 -896 5250 3794 4850 18 0 0 chr10 60279578 60280123 -80036642 + L1PA2 LINE L1 5611 6155 0 * 1438 217 43 15 chr10 60280363 60280690 -80036075 + MLT1E3 LTR MaLR 289 624 0 658 199 29 0 chr10 60281526 60281662 -80035103 - Ricksha DNA DNA -1905 141 2 6436 131 55 8 chr10 60281664 60282714 -80034051 + Tigger1 DNA MER2_type 379 1478 -940 1419 156 23 23 chr10 60282731 60283032 -80033733 - AluSx SINE Alu -2 310 10 276 234 106 21 chr10 60283180 60283274 -80033491 - L1M4 LINE L1 -1931 4215 4114 665 137 0 0 chr10 60283608 60283703 -80033062 - MLT2B3 LTR ERVL -94 460 366 21 57 0 0 chr10 60285689 60285724 -80031041 + AT_rich Low_complexity Low_complexity 1 35 0 454 281 108 5 chr10 60285896 60286081 -80030684 - MIR SINE MIR -2 260 57 985 150 135 26 chr10 60286094 60286415 -80030350 + THE1C LTR MaLR 1 355 -9 194 314 0 0 chr10 60286640 60286691 -80030074 - MIR SINE MIR -102 160 110 3591 30 0 0 chr10 60286925 60287322 -80029443 - L1PA4 LINE L1 -6 6149 5753 1774 154 14 14 chr10 60287328 60287614 -80029151 - AluJo SINE Alu -21 291 6 344 272 70 6 chr10 60287708 60287866 -80028899 - L1MEc LINE L1 -5328 1068 901 22 35 0 0 chr10 60288384 60288413 -80028352 + AT_rich Low_complexity Low_complexity 1 29 0 1868 103 50 21 chr10 60288800 60289082 -80027683 + AluSx SINE Alu 17 306 -6 279 303 202 0 chr10 60289357 60289466 -80027299 - MIR SINE MIR -115 147 17 511 233 0 8 chr10 60289618 60289738 -80027027 - L1ME3A LINE L1 -7 6163 6045 2061 132 7 16 chr10 60289739 60290042 -80026723 + AluSx SINE Alu 1 300 -12 1028 167 0 6 chr10 60290075 60290231 -80026534 - FRAM SINE Alu -10 156 2 240 211 0 0 chr10 60291035 60291092 -80025673 + A-rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr10 60292806 60292827 -80023938 + AT_rich Low_complexity Low_complexity 1 21 0 1894 139 31 0 chr10 60295104 60295392 -80021373 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr10 60295475 60295496 -80021269 + AT_rich Low_complexity Low_complexity 1 21 0 2887 181 11 28 chr10 60296375 60297047 -80019718 + L1MB1 LINE L1 4804 5468 -700 224 89 0 22 chr10 60297048 60297093 -80019672 + (TTA)n Simple_repeat Simple_repeat 3 46 0 7901 29 20 0 chr10 60297093 60298027 -80018738 - L1PA3 LINE L1 -18 6137 5203 3699 144 73 18 chr10 60298027 60298288 -80018477 + L1MB1 LINE L1 5472 5717 -451 2416 73 0 13 chr10 60298288 60298591 -80018174 + AluY SINE Alu 1 299 -12 3699 144 73 18 chr10 60298591 60298987 -80017778 + L1MB1 LINE L1 5717 6165 -3 270 0 0 0 chr10 60299191 60299221 -80017544 + (A)n Simple_repeat Simple_repeat 1 30 0 214 250 0 0 chr10 60299227 60299283 -80017482 + GA-rich Low_complexity Low_complexity 2 57 0 243 0 0 0 chr10 60299286 60299313 -80017452 + (TG)n Simple_repeat Simple_repeat 2 28 0 187 304 18 0 chr10 60299685 60299741 -80017024 + L2 LINE L2 3185 3241 -31 2271 109 7 3 chr10 60300315 60300619 -80016146 + AluSg SINE Alu 1 305 -5 1966 122 31 14 chr10 60300751 60301039 -80015726 + AluSx SINE Alu 1 293 -19 215 220 20 40 chr10 60301141 60301191 -80015574 + MER5B DNA MER1_type 68 116 -62 681 269 85 5 chr10 60301349 60301572 -80015193 + MIR SINE MIR 20 260 -2 1342 243 46 64 chr10 60301664 60302166 -80014599 - L1MD1 LINE L1 -5 6237 5745 539 340 84 8 chr10 60302913 60303175 -80013590 + L2 LINE L2 1830 2111 -1203 1655 198 89 40 chr10 60303182 60303631 -80013134 - L1MC3 LINE L1 -629 7156 6686 333 250 141 16 chr10 60305514 60305642 -80011123 + MIR SINE MIR 60 203 -59 2121 133 3 0 chr10 60308805 60309107 -80007658 + AluSx SINE Alu 1 303 -9 864 144 28 38 chr10 60311288 60311488 -80005277 + MER6 DNA MER2_type -64 865 0 436 311 30 19 chr10 60311544 60311731 -80005034 + MER5B DNA MER1_type 3 178 0 23 0 0 0 chr10 60312282 60312305 -80004460 + AT_rich Low_complexity Low_complexity 1 23 0 2520 165 78 11 chr10 60312343 60312816 -80003949 + MLT1D LTR MaLR 1 505 0 626 280 104 21 chr10 60312935 60313214 -80003551 + L1MC4a LINE L1 5600 5901 -1907 757 228 0 0 chr10 60313255 60313391 -80003374 + MER8 DNA MER2_type 42 177 -62 487 105 0 40 chr10 60313424 60313500 -80003265 - Tigger2 DNA MER2_type -2645 73 1 180 0 0 0 chr10 60313665 60313685 -80003080 + (A)n Simple_repeat Simple_repeat 1 20 0 252 205 51 26 chr10 60315009 60315087 -80001678 + MER116 DNA Mariner 1 80 0 216 0 0 0 chr10 60316202 60316226 -80000539 + (CA)n Simple_repeat Simple_repeat 2 25 0 363 267 73 63 chr10 60317002 60317208 -79999557 - L2 LINE L2 -8 3305 3098 24 0 0 0 chr10 60317275 60317299 -79999466 + AT_rich Low_complexity Low_complexity 1 24 0 571 313 70 9 chr10 60318074 60318304 -79998461 + MIR SINE MIR 18 261 -1 363 280 40 69 chr10 60318278 60318453 -79998312 + L2 LINE L2 3128 3297 -16 * 1964 149 7 0 chr10 60318785 60319081 -79997684 - AluJo SINE Alu -14 298 1 386 297 29 14 chr10 60319322 60319460 -79997305 + MIR3 SINE MIR 61 200 -8 4743 169 62 7 chr10 60320053 60320873 -79995892 + MER6 DNA MER2_type 1 865 0 1270 177 0 5 chr10 60322153 60322406 -79994359 + AluJo SINE Alu 87 338 0 24 0 0 0 chr10 60322457 60322481 -79994284 + AT_rich Low_complexity Low_complexity 1 24 0 247 228 110 41 chr10 60323393 60323538 -79993227 + L1ME4a LINE L1 5966 6120 -1 651 202 0 0 chr10 60324216 60324320 -79992445 + FLAM_A SINE Alu 1 104 -38 2001 195 172 69 chr10 60324323 60325137 -79991628 + LTR28 LTR ERV1 7 1020 0 238 283 0 0 chr10 60326260 60326313 -79990452 + polypurine Low_complexity Low_complexity 2 54 0 2052 142 24 48 chr10 60326738 60327111 -79989654 + THE1B LTR MaLR 1 364 0 184 269 183 0 chr10 60328679 60328783 -79987982 - L2 LINE L2 -233 3039 2917 489 227 106 53 chr10 60328804 60329011 -79987754 - MER112 DNA MER1_type -11 249 32 213 308 0 65 chr10 60329094 60329201 -79987564 - MIR SINE MIR -116 146 47 201 297 81 0 chr10 60330210 60330284 -79986481 + MIR SINE MIR 66 145 -117 2851 157 57 13 chr10 60330985 60331532 -79985233 + L1MB8 LINE L1 5607 6177 -1 314 333 24 16 chr10 60333537 60333660 -79983105 - MIR3 SINE MIR -49 159 36 2125 140 0 0 chr10 60334769 60335062 -79981703 + AluSq SINE Alu 1 293 -20 1960 97 58 55 chr10 60335853 60335979 -79980786 + AluSx SINE Alu 1 125 -187 225 94 0 0 chr10 60335979 60336011 -79980754 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 1960 97 58 55 chr10 60336011 60336194 -79980571 + AluSx SINE Alu 125 311 -1 1810 157 20 7 chr10 60337378 60337677 -79979088 + AluJo SINE Alu 1 303 -9 2372 93 3 6 chr10 60339065 60339377 -79977388 + AluSq SINE Alu 1 311 -2 193 339 177 19 chr10 60339870 60340130 -79976635 + L2 LINE L2 2567 2867 -447 231 378 42 17 chr10 60340728 60340847 -79975918 - MIR SINE MIR -65 143 22 697 297 83 14 chr10 60341340 60341425 -79975340 - L1ME3A LINE L1 -339 5814 5736 2207 110 3 0 chr10 60341425 60341726 -79975039 - AluSg SINE Alu -8 302 1 697 297 83 14 chr10 60341726 60341930 -79974835 - L1ME3A LINE L1 -417 5736 5505 247 211 248 8 chr10 60341937 60342070 -79974695 - L1ME3A LINE L1 -802 5327 5163 2074 282 76 18 chr10 60342072 60342991 -79973774 + L2 LINE L2 2149 3135 -178 1247 233 131 68 chr10 60343012 60343265 -79973500 - L1ME3A LINE L1 -1769 4360 4125 2353 79 10 0 chr10 60343265 60343568 -79973197 - AluY SINE Alu -5 306 1 1247 233 131 68 chr10 60343568 60343650 -79973115 - L1ME3A LINE L1 -2004 4125 4050 2009 134 3 17 chr10 60343650 60343949 -79972816 - AluSx SINE Alu -17 295 1 1247 233 131 68 chr10 60343949 60344350 -79972415 - L1ME3A LINE L1 -2079 4050 3576 2476 80 0 0 chr10 60344353 60344655 -79972110 - AluY SINE Alu -9 302 1 1157 45 0 0 chr10 60344656 60344788 -79971977 - AluY SINE Alu -179 132 1 474 318 58 12 chr10 60344798 60345056 -79971709 - L1ME3A LINE L1 -2572 3557 3288 275 354 55 24 chr10 60345090 60345344 -79971421 - L1ME3A LINE L1 -5266 853 592 1486 109 95 78 chr10 60346072 60346366 -79970399 + AluSx SINE Alu 2 300 -12 207 0 0 0 chr10 60346949 60346972 -79969793 + (T)n Simple_repeat Simple_repeat 1 23 0 2354 71 0 3 chr10 60348660 60348955 -79967810 - AluY SINE Alu -17 294 1 216 0 0 0 chr10 60349420 60349444 -79967321 + (T)n Simple_repeat Simple_repeat 1 24 0 2745 184 34 26 chr10 60349465 60349999 -79966766 + MER6A DNA MER2_type 1 538 -67 1330 128 6 0 chr10 60349999 60350179 -79966586 + AluSq SINE Alu 1 181 -132 314 159 191 0 chr10 60350179 60350242 -79966523 + AluS SINE Alu 225 299 -2 * 494 185 0 0 chr10 60350234 60350315 -79966450 + MER6A DNA MER2_type 525 605 0 2100 122 0 7 chr10 60350324 60350618 -79966147 - AluSx SINE Alu -20 292 1 1064 155 55 0 chr10 60351791 60351972 -79964793 + L1MB3 LINE L1 5990 6180 -3 216 0 0 0 chr10 60352736 60352760 -79964005 + (A)n Simple_repeat Simple_repeat 1 24 0 1857 170 3 6 chr10 60354855 60355166 -79961599 + AluJb SINE Alu 1 310 -2 205 213 0 21 chr10 60356819 60356866 -79959899 + L3 LINE CR1 1338 1383 -194 2103 118 0 16 chr10 60356890 60357194 -79959571 + AluSg1 SINE Alu 1 299 -10 840 150 140 35 chr10 60357194 60357394 -79959371 + L1MB7 LINE L1 5964 6184 0 24 0 0 0 chr10 60357949 60357973 -79958792 + AT_rich Low_complexity Low_complexity 1 24 0 347 264 55 9 chr10 60360381 60360491 -79956274 - MER5C DNA MER1_type -204 120 6 430 330 57 5 chr10 60360506 60360718 -79956047 + MIR SINE MIR 27 249 -13 408 40 0 0 chr10 60360795 60360845 -79955920 + (TG)n Simple_repeat Simple_repeat 1 50 0 312 267 107 65 chr10 60360986 60361417 -79955348 + L1MEd LINE L1 785 1233 -4886 1536 156 3 62 chr10 60361417 60361705 -79955060 + AluSx SINE Alu 31 301 -11 2099 247 69 44 chr10 60361905 60362372 -79954393 + L1MCc LINE L1 788 1242 -5657 1529 181 3 62 chr10 60362372 60362517 -79954248 + AluJb SINE Alu 3 122 -190 1692 157 65 14 chr10 60362517 60362811 -79953954 + AluSx SINE Alu 1 309 -3 1529 181 3 62 chr10 60362811 60362974 -79953791 + AluJb SINE Alu 122 293 -19 2099 247 69 44 chr10 60362974 60363689 -79953076 + L1MCc LINE L1 1242 2011 -4888 1847 162 0 3 chr10 60363809 60364105 -79952660 + AluSx SINE Alu 1 295 -17 516 72 0 0 chr10 60364121 60364190 -79952575 + (CA)n Simple_repeat Simple_repeat 2 70 0 526 289 167 35 chr10 60364205 60364721 -79952044 + L1ME3A LINE L1 5322 5905 -259 855 203 136 11 chr10 60364997 60365313 -79951452 + L1MB5 LINE L1 5826 6184 0 411 182 197 27 chr10 60366191 60366332 -79950433 - MLT1H LTR MaLR -3 546 400 2307 101 3 0 chr10 60367176 60367482 -79949283 + AluSc SINE Alu 1 307 -2 277 271 79 57 chr10 60368221 60368361 -79948404 - MIR SINE MIR -117 145 3 750 191 51 25 chr10 60368688 60368815 -79947950 + LTR32 LTR ERVL 15 145 -326 4113 95 19 14 chr10 60368815 60369163 -79947602 + MER4B LTR ERV1 1 355 -255 1751 161 0 48 chr10 60369163 60369473 -79947292 - AluJb SINE Alu -17 295 1 4113 95 19 14 chr10 60369473 60369713 -79947052 + MER4B LTR ERV1 355 592 -18 662 100 0 11 chr10 60369699 60369789 -79946976 + MER4B LTR ERV1 522 610 0 * 1141 167 15 20 chr10 60369789 60369987 -79946778 + LTR32 LTR ERVL 164 360 -111 862 205 0 6 chr10 60370060 60370216 -79946549 + LTR32 LTR ERVL 317 471 0 2453 145 73 0 chr10 60370263 60370662 -79946103 + MER68 LTR ERV1 135 562 0 187 236 57 57 chr10 60370837 60370960 -79945805 + L2 LINE L2 2253 2375 -939 450 114 0 0 chr10 60370994 60371073 -79945692 + (A)n Simple_repeat Simple_repeat 1 79 0 550 298 124 39 chr10 60371080 60371547 -79945218 + L2 LINE L2 2454 2960 -354 213 333 157 9 chr10 60371693 60371801 -79944964 + L2 LINE L2 3123 3246 -26 454 311 82 41 chr10 60372131 60372498 -79944267 + MLT1J LTR MaLR 20 401 -110 28 79 0 0 chr10 60372771 60372834 -79943931 + AT_rich Low_complexity Low_complexity 1 63 0 189 0 0 0 chr10 60373080 60373101 -79943664 + (A)n Simple_repeat Simple_repeat 1 21 0 412 324 36 22 chr10 60373203 60373342 -79943423 + MIR3 SINE MIR 7 147 -61 620 237 115 55 chr10 60374502 60374755 -79942010 + MER46C DNA MER2_type 1 268 -70 1774 206 63 27 chr10 60374770 60375217 -79941548 + MLT1C LTR MaLR 3 465 -2 299 186 102 0 chr10 60375233 60375292 -79941473 + MER46C DNA MER2_type 273 337 -1 339 25 0 0 chr10 60375725 60375765 -79941000 + (CA)n Simple_repeat Simple_repeat 2 41 0 1858 202 81 57 chr10 60376159 60376630 -79940135 + MLT1D LTR MaLR 24 505 0 1986 109 88 0 chr10 60377681 60377965 -79938800 - AluSx SINE Alu -3 309 1 180 0 0 0 chr10 60378206 60378226 -79938539 + (A)n Simple_repeat Simple_repeat 1 20 0 375 323 163 12 chr10 60378264 60378448 -79938317 + L1M4 LINE L1 3689 3844 -2302 1799 173 65 0 chr10 60378448 60378772 -79937993 - MER7A DNA MER2_type 0 346 4 375 323 163 12 chr10 60378772 60379005 -79937760 + L1M4 LINE L1 3844 4169 -1977 183 216 68 40 chr10 60380685 60380759 -79936006 - MIR SINE MIR -105 157 82 1159 257 101 24 chr10 60381009 60381520 -79935245 + MER90 LTR ERV1 27 570 -5 977 217 181 4 chr10 60382000 60382277 -79934488 + L1ME3A LINE L1 5840 6165 -5 279 255 75 0 chr10 60382361 60382467 -79934298 + MIR SINE MIR 91 204 -58 190 174 20 51 chr10 60383588 60383686 -79933079 + GA-rich Low_complexity Low_complexity 2 96 0 255 128 0 113 chr10 60383696 60383891 -79932874 + (GGAAA)n Simple_repeat Simple_repeat 4 176 0 247 353 0 33 chr10 60383893 60384015 -79932750 + G-rich Low_complexity Low_complexity 3 120 0 2254 92 0 0 chr10 60384052 60384344 -79932421 + AluY SINE Alu 1 292 -19 323 306 83 71 chr10 60385744 60386068 -79930697 + L1MC4a LINE L1 5589 5916 -1892 2210 129 0 0 chr10 60386156 60386467 -79930298 + AluSx SINE Alu 1 311 -1 215 136 45 0 chr10 60386469 60386513 -79930252 + GA-rich Low_complexity Low_complexity 3 48 0 617 297 108 12 chr10 60388153 60388486 -79928279 + L1MC4a LINE L1 5283 5647 -2161 498 272 42 42 chr10 60388517 60388708 -79928057 + MIR SINE MIR 31 221 -41 406 241 218 35 chr10 60388709 60388966 -79927799 + L1MC4a LINE L1 5635 5938 -1870 24 32 0 0 chr10 60388995 60389026 -79927739 + AT_rich Low_complexity Low_complexity 1 31 0 212 300 71 41 chr10 60389237 60389407 -79927358 + MIR SINE MIR 23 197 -65 240 176 141 35 chr10 60390042 60390127 -79926638 + L1MC5 LINE L1 7647 7740 -221 206 286 41 31 chr10 60390714 60390812 -79925953 + L2 LINE L2 2872 2970 -302 459 235 91 48 chr10 60390945 60391348 -79925417 + LTR33A LTR ERVL 2 469 -54 203 244 67 11 chr10 60391977 60392067 -79924698 - MIR SINE MIR -102 160 66 23 33 0 0 chr10 60392077 60392107 -79924658 + AT_rich Low_complexity Low_complexity 1 30 0 2266 43 0 7 chr10 60392107 60392383 -79924382 - L1PA5 LINE L1 0 6154 5881 962 198 11 0 chr10 60392421 60392608 -79924157 - MER53 DNA DNA 0 189 1 825 217 33 52 chr10 60394358 60394687 -79922078 + L1ME3A LINE L1 5783 6108 -58 1636 162 3 27 chr10 60394687 60394983 -79921782 + AluJb SINE Alu 1 289 -23 261 0 0 0 chr10 60394986 60395015 -79921750 + (CATA)n Simple_repeat Simple_repeat 2 30 0 319 323 132 0 chr10 60395223 60395390 -79921375 + MIR SINE MIR 38 226 -36 231 122 122 0 chr10 60395881 60395922 -79920843 + L2 LINE L2 3218 3263 -9 1680 172 14 14 chr10 60396365 60396655 -79920110 + AluJo SINE Alu 1 290 -22 646 265 45 47 chr10 60396705 60396945 -79919820 + MIR SINE MIR 27 261 -1 1710 230 60 39 chr10 60397051 60397516 -79919249 + MER77 LTR ERV1 57 531 -74 21 0 0 0 chr10 60397588 60397609 -79919156 + AT_rich Low_complexity Low_complexity 1 21 0 241 43 43 43 chr10 60397935 60397982 -79918783 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1239 105 38 10 chr10 60397997 60398206 -79918559 + L1MB4 LINE L1 5966 6180 0 2480 70 0 7 chr10 60398602 60398901 -79917864 - AluSp SINE Alu -16 297 1 1764 146 8 4 chr10 60402122 60402390 -79914375 + AluSx SINE Alu 1 269 -43 4591 146 67 22 chr10 60403649 60403735 -79913030 + L1MC1 LINE L1 5431 5512 -821 2234 97 0 19 chr10 60403735 60404043 -79912722 - AluSx SINE Alu -10 302 1 4591 146 67 22 chr10 60404043 60404820 -79911945 + L1MC1 LINE L1 5512 6333 0 234 105 0 0 chr10 60407638 60407676 -79909089 + (CCG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 60410662 60410683 -79906082 + AT_rich Low_complexity Low_complexity 1 21 0 656 157 0 95 chr10 60410887 60411034 -79905731 - FLAM_C SINE Alu 0 133 1 1081 156 94 6 chr10 60411132 60411312 -79905453 - MER20 DNA MER1_type -23 196 1 2230 118 0 9 chr10 60411489 60411804 -79904961 - AluSx SINE Alu 0 312 1 499 86 43 0 chr10 60412084 60412154 -79904611 - AluS SINE Alu -239 74 2 365 239 119 15 chr10 60412383 60412517 -79904248 + L1MC4a LINE L1 5697 5844 -1964 185 216 0 59 chr10 60412525 60412576 -79904189 + L2 LINE L2 2949 2996 -317 257 256 75 68 chr10 60412725 60412858 -79903907 + L2 LINE L2 3180 3313 0 1486 177 45 0 chr10 60413304 60413570 -79903195 + AluJo SINE Alu 20 297 -15 804 264 39 0 chr10 60413665 60413873 -79902892 - MER58A DNA MER1_type 0 224 9 525 265 103 27 chr10 60414597 60414782 -79901983 - L2 LINE L2 -1 3312 3114 538 212 201 0 chr10 60415030 60415219 -79901546 - MIR SINE MIR -28 234 8 1705 110 0 46 chr10 60415394 60415657 -79901108 + AluSx SINE Alu 27 277 -35 1940 112 0 25 chr10 60415836 60416112 -79900653 + AluSg SINE Alu 33 301 -9 232 162 0 0 chr10 60416112 60416149 -79900616 - Alu SINE Alu -262 37 1 496 292 30 6 chr10 60416226 60416394 -79900371 + MIR SINE MIR 78 249 -13 1276 108 11 0 chr10 60417076 60417252 -79899513 - AluSq SINE Alu -48 265 88 1162 195 9 4 chr10 60417263 60417489 -79899276 - AluJb SINE Alu -52 260 34 374 274 97 22 chr10 60417652 60417905 -79898860 - L1ME2 LINE L1 -10 6154 5881 467 269 64 13 chr10 60418384 60418540 -79898225 + Charlie8 DNA MER1_type 43 206 -2211 852 213 75 13 chr10 60420030 60420269 -79896496 + L1MC4a LINE L1 5693 5946 -1862 3938 214 45 6 chr10 60421187 60422178 -79894587 + L1 LINE L1 2849 3878 -2268 321 159 63 0 chr10 60422181 60422244 -79894521 - Zaphod DNA AcHobo -141 3890 3824 279 85 178 0 chr10 60422376 60422438 -79894327 + Alu SINE Alu 246 302 0 792 91 33 8 chr10 60422585 60422706 -79894059 - L1MA8 LINE L1 -3 6288 6165 188 403 16 8 chr10 60422711 60422840 -79893925 - MIR SINE MIR -61 147 18 294 121 224 0 chr10 60423180 60423238 -79893527 + THE1C LTR MaLR 1 71 -304 2815 60 14 6 chr10 60423266 60423618 -79893147 + THE1C LTR MaLR 21 375 0 500 247 217 18 chr10 60424105 60424235 -79892530 - Zaphod DNA AcHobo -3789 242 71 432 0 0 0 chr10 60424235 60424283 -79892482 + (TG)n Simple_repeat Simple_repeat 2 49 0 500 247 217 18 chr10 60424283 60424318 -79892447 - Zaphod DNA AcHobo -3960 71 44 552 281 126 9 chr10 60425925 60426156 -79890609 + L1M4 LINE L1 3712 3969 -2177 2143 141 0 0 chr10 60426331 60426636 -79890129 - AluSq SINE Alu -8 305 1 310 306 35 41 chr10 60426639 60426809 -79889956 - L1MC4a LINE L1 -1871 5937 5769 287 299 55 8 chr10 60427333 60427460 -79889305 + MIR SINE MIR 56 188 -74 924 122 8 0 chr10 60428151 60428282 -79888483 - AluSq/x SINE Alu -180 132 1 579 246 125 26 chr10 60428425 60428657 -79888108 - MIR SINE MIR 0 262 8 272 348 58 7 chr10 60428874 60429012 -79887753 + MIR SINE MIR 73 217 -45 2036 101 3 21 chr10 60429286 60429574 -79887191 - AluSc SINE Alu -26 283 1 765 266 78 12 chr10 60429614 60429858 -79886907 - LTR16B LTR ERVL 0 464 205 4066 165 23 6 chr10 60430018 60430701 -79886064 + L1MC1 LINE L1 5634 6328 -5 1999 117 41 3 chr10 60430840 60431130 -79885635 + AluSc SINE Alu 1 301 -8 488 300 40 56 chr10 60431270 60431520 -79885245 + L1M4 LINE L1 2857 3102 -3044 399 213 53 11 chr10 60431648 60431742 -79885023 - MIR SINE MIR -111 151 54 347 257 121 19 chr10 60431728 60431902 -79884863 - MIR SINE MIR -67 195 4 * 2290 90 3 10 chr10 60432975 60433275 -79883490 - AluY SINE Alu -13 298 1 2232 119 0 3 chr10 60433325 60433636 -79883129 - AluSg SINE Alu 0 310 1 326 94 0 158 chr10 60434118 60434289 -79882476 - AluSp/q SINE Alu -2 301 158 402 88 0 124 chr10 60434374 60434487 -79882278 - AluS SINE Alu -213 99 1 559 221 210 75 chr10 60434821 60434894 -79881871 + MSTD LTR MaLR 1 63 -333 2223 92 7 3 chr10 60434894 60435189 -79881576 + AluSg1 SINE Alu 1 296 -13 559 221 210 75 chr10 60435189 60435396 -79881369 + MSTD LTR MaLR 63 319 -77 537 88 0 0 chr10 60435859 60435927 -79880838 - Alu SINE Alu -241 69 2 186 217 17 33 chr10 60436454 60436514 -79880251 + L3 LINE CR1 634 692 -885 216 0 0 0 chr10 60436875 60436899 -79879866 + (T)n Simple_repeat Simple_repeat 1 24 0 1004 169 6 17 chr10 60437375 60437547 -79879218 - AluJo SINE Alu -142 170 1 1366 214 28 70 chr10 60437553 60438012 -79878753 - L1MC5 LINE L1 -818 7143 6704 500 223 27 0 chr10 60438216 60438328 -79878437 + MIR SINE MIR 54 168 -94 213 191 24 0 chr10 60438487 60438529 -79878236 - MIR SINE MIR -112 150 108 246 208 0 0 chr10 60438628 60438681 -79878084 - MLT1J LTR MaLR -33 478 426 2116 104 0 0 chr10 60438870 60439171 -79877594 - AluSc SINE Alu 0 301 1 201 133 0 0 chr10 60439797 60439827 -79876938 - MIR SINE MIR -118 90 61 225 319 44 0 chr10 60440299 60440390 -79876375 + MIR SINE MIR 168 262 0 230 304 19 42 chr10 60440416 60440527 -79876238 + MER5B DNA MER1_type 20 138 -51 2331 164 76 9 chr10 60440783 60441215 -79875550 - LOR1b LTR ERV1 0 461 1 955 160 9 71 chr10 60441531 60441612 -79875153 - MER2 DNA MER2_type -5 340 256 2365 92 0 0 chr10 60441612 60441905 -79874860 + AluSx SINE Alu 1 293 -19 955 160 9 71 chr10 60441905 60442035 -79874730 - MER2 DNA MER2_type -89 256 142 632 218 18 42 chr10 60442035 60442200 -79874565 - AluSg/x SINE Alu -22 288 128 280 355 0 0 chr10 60442233 60442374 -79874391 + T-rich Low_complexity Low_complexity 1 141 0 234 342 0 54 chr10 60442365 60442549 -79874216 + C-rich Low_complexity Low_complexity 3 176 0 * 307 344 0 31 chr10 60442476 60442639 -79874126 + CT-rich Low_complexity Low_complexity 5 162 0 2359 104 3 0 chr10 60443578 60443886 -79872879 - AluSp SINE Alu -4 309 1 21 0 0 0 chr10 60445045 60445066 -79871699 + AT_rich Low_complexity Low_complexity 1 21 0 2049 139 48 0 chr10 60445079 60445416 -79871349 - L1MA2 LINE L1 -2 6302 5950 4739 195 63 15 chr10 60445527 60446686 -79870079 - L1 LINE L1 -2181 3965 2751 409 281 79 73 chr10 60446740 60447043 -79869722 - MLT1K LTR MaLR -253 335 31 304 352 45 15 chr10 60447417 60447616 -79869149 + L1MC/D LINE L1 5562 5766 -2042 632 187 6 148 chr10 60447748 60447930 -79868835 + MSTD LTR MaLR 238 393 -3 563 311 102 4 chr10 60447974 60448238 -79868527 - L2 LINE L2 -774 2540 2251 877 142 71 6 chr10 60448581 60448750 -79868015 + L1MA4 LINE L1 6116 6295 -5 211 176 0 0 chr10 60449756 60449790 -79866975 + G-rich Low_complexity Low_complexity 3 36 0 2159 100 0 0 chr10 60449863 60450173 -79866592 - AluSx SINE Alu 0 311 2 269 313 92 20 chr10 60450546 60450850 -79865915 + L1 LINE L1 4405 4730 -1416 343 312 135 14 chr10 60450864 60451079 -79865686 + L1 LINE L1 4781 5021 -1125 2001 148 3 3 chr10 60451080 60451384 -79865381 + AluJb SINE Alu 9 312 0 244 236 179 32 chr10 60451708 60451831 -79864934 - L1P LINE L1 -2322 3824 3684 1501 285 54 16 chr10 60451962 60452407 -79864358 + LTR16B LTR ERVL 3 464 0 2025 102 3 71 chr10 60452447 60452770 -79863995 + AluSx SINE Alu 1 301 -11 543 291 96 14 chr10 60452771 60452991 -79863774 - MIR SINE MIR -4 258 21 790 230 66 47 chr10 60453036 60453310 -79863455 - L1MC5 LINE L1 -469 7492 7214 461 333 14 34 chr10 60454473 60454680 -79862085 + L2 LINE L2 2588 2790 -524 322 287 64 11 chr10 60454683 60454777 -79861988 + L2 LINE L2 2987 3085 -187 695 290 43 5 chr10 60454786 60454993 -79861772 + MIR SINE MIR 28 242 -20 203 283 10 61 chr10 60455132 60455231 -79861534 + MIR3 SINE MIR 108 201 -7 2333 87 7 0 chr10 60456773 60457073 -79859692 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 60457205 60457233 -79859532 + (T)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr10 60458129 60458192 -79858573 + AT_rich Low_complexity Low_complexity 1 63 0 2445 83 0 3 chr10 60458689 60459001 -79857764 - AluY SINE Alu 0 311 1 934 296 166 32 chr10 60459012 60459580 -79857185 + L2 LINE L2 2111 2754 -560 4754 120 22 33 chr10 60459639 60460388 -79856377 - L1PA14 LINE L1 -74 6087 5346 2142 129 10 0 chr10 60460388 60460690 -79856075 + AluSx SINE Alu 1 305 -7 4754 120 22 33 chr10 60460690 60460749 -79856016 - L1PA14 LINE L1 -815 5346 5288 822 171 32 0 chr10 60460747 60460905 -79855860 + L1PA14 LINE L1 5121 5283 -863 * 193 300 0 0 chr10 60460911 60460961 -79855804 + L2 LINE L2 2764 2813 -501 442 323 45 19 chr10 60461101 60461256 -79855509 + L2 LINE L2 2898 3056 -257 970 140 0 13 chr10 60461454 60461604 -79855161 - AluSx SINE Alu -144 168 21 824 154 13 70 chr10 60461605 60461628 -79855137 - MER2 DNA MER2_type -197 148 125 3373 89 43 7 chr10 60461628 60462024 -79854741 + MLT2A2 LTR ERVL 1 416 -37 369 0 0 0 chr10 60462024 60462065 -79854700 + (TA)n Simple_repeat Simple_repeat 2 42 0 3373 89 43 7 chr10 60462065 60462105 -79854660 + MLT2A2 LTR ERVL 416 453 0 16000 120 31 16 chr10 60462106 60463275 -79853490 + Tigger1 DNA MER2_type 1 1151 -1267 2123 142 0 0 chr10 60463275 60463578 -79853187 + AluSx SINE Alu 3 305 -7 16000 120 31 16 chr10 60463578 60464417 -79852348 + Tigger1 DNA MER2_type 1151 2053 -365 2388 86 7 0 chr10 60464417 60464719 -79852046 - AluSp SINE Alu -9 304 1 16000 120 31 16 chr10 60464719 60465090 -79851675 + Tigger1 DNA MER2_type 2053 2417 -1 824 154 13 70 chr10 60465090 60465220 -79851545 - MER2 DNA MER2_type -219 126 2 441 0 0 0 chr10 60465264 60465313 -79851452 + (TG)n Simple_repeat Simple_repeat 2 50 0 830 208 92 24 chr10 60466013 60466224 -79850541 + LTR45B LTR ERV1 250 579 -24 323 233 35 35 chr10 60466316 60466402 -79850363 + MIR3 SINE MIR 91 176 -32 2322 104 0 19 chr10 60467591 60467907 -79848858 - AluSx SINE Alu -2 310 1 2203 96 0 46 chr10 60468617 60468940 -79847825 + AluSq SINE Alu 1 308 -5 590 243 15 7 chr10 60469222 60469358 -79847407 + MER5B DNA MER1_type 1 137 -41 2080 121 6 13 chr10 60469494 60469807 -79846958 - AluSx SINE Alu -1 311 1 300 271 29 0 chr10 60469808 60469878 -79846887 - MER5A DNA MER1_type -113 76 5 218 322 0 0 chr10 60470161 60470220 -79846545 + CT-rich Low_complexity Low_complexity 2 60 0 265 216 102 23 chr10 60470529 60470617 -79846148 - MIR SINE MIR -44 218 124 802 138 25 38 chr10 60470632 60470791 -79845974 - AluSg/x SINE Alu 0 310 154 2288 172 47 58 chr10 60471132 60471598 -79845167 + LOR1b LTR ERV1 1 461 0 1326 170 0 90 chr10 60471978 60472301 -79844464 - AluJo SINE Alu -16 296 3 1805 207 15 6 chr10 60472660 60473003 -79843762 + MSTD LTR MaLR 1 346 -50 2157 169 76 32 chr10 60473229 60473662 -79843103 + LTR47A LTR ERVL 1 452 0 2235 112 3 10 chr10 60473677 60473991 -79842774 + AluSx SINE Alu 1 312 0 2116 111 51 26 chr10 60474543 60474895 -79841870 + L1PA16 LINE L1 5806 6166 0 2299 98 3 16 chr10 60474919 60475248 -79841517 - AluSq SINE Alu 0 325 1 373 274 171 0 chr10 60476046 60476163 -79840602 - MER91C DNA MER1_type 0 140 4 883 215 111 97 chr10 60476614 60476912 -79839853 - MLT1K LTR MaLR -6 582 281 758 278 47 5 chr10 60477006 60477218 -79839547 - MLT1K LTR MaLR -333 255 35 193 364 70 40 chr10 60477880 60478108 -79838657 + L2 LINE L2 2815 3049 -223 210 247 278 10 chr10 60478384 60478481 -79838284 + L2 LINE L2 3188 3310 -3 1346 126 30 56 chr10 60479402 60479633 -79837132 - AluJb SINE Alu -81 231 7 7572 150 20 11 chr10 60479869 60482215 -79834550 + L1MA6 LINE L1 3926 6294 -6 279 0 0 0 chr10 60482732 60482763 -79834002 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 241 253 24 60 chr10 60483475 60483558 -79833207 - L2 LINE L2 0 3272 3193 226 167 0 0 chr10 60483632 60483674 -79833091 + MLT1K LTR MaLR 160 201 -387 308 282 0 24 chr10 60483833 60483918 -79832847 + GA-rich Low_complexity Low_complexity 5 87 0 342 230 30 20 chr10 60484481 60484581 -79832184 + MLT1F1 LTR MaLR 1 101 -466 272 176 162 0 chr10 60484581 60484655 -79832110 + Charlie1 DNA MER1_type 1611 1696 -1065 1226 157 16 12 chr10 60484682 60484930 -79831835 + L1MB7 LINE L1 5927 6175 -9 534 283 34 19 chr10 60484935 60485200 -79831565 + L1M4 LINE L1 3386 3654 -2492 336 178 42 76 chr10 60485202 60485274 -79831491 - L1M4 LINE L1 -2159 3987 3919 2360 75 7 10 chr10 60485274 60485581 -79831184 + AluY SINE Alu 1 306 -5 336 178 42 76 chr10 60485581 60485626 -79831139 - L1M4 LINE L1 -2227 3919 3874 274 145 101 14 chr10 60485623 60485692 -79831073 + L1M4 LINE L1 3769 3843 -2303 * 483 209 0 0 chr10 60485703 60485808 -79830957 + L1M4 LINE L1 5127 5231 -915 876 223 29 10 chr10 60485815 60486021 -79830744 + MER97c DNA MER1_type? 1 210 -880 1077 221 35 38 chr10 60486023 60486313 -79830452 + Charlie1a DNA MER1_type 12 300 -1155 2189 105 3 23 chr10 60486336 60486642 -79830123 + AluSp SINE Alu 1 300 -13 23 54 0 0 chr10 60486657 60486694 -79830071 + AT_rich Low_complexity Low_complexity 1 37 0 471 187 207 0 chr10 60486713 60486863 -79829902 + L1MA9 LINE L1 6132 6312 0 1587 192 112 19 chr10 60486891 60487319 -79829446 + Charlie1a DNA MER1_type 305 772 -683 358 196 197 27 chr10 60488628 60488769 -79827996 - MLT1H LTR MaLR -3 546 400 2294 105 3 0 chr10 60489613 60489919 -79826846 + AluSc SINE Alu 1 307 -2 270 312 48 40 chr10 60490658 60490783 -79825982 - MIR SINE MIR -117 145 20 682 191 51 25 chr10 60491125 60491252 -79825513 + LTR32 LTR ERVL 15 145 -326 3820 95 19 14 chr10 60491252 60491600 -79825165 + MER4B LTR ERV1 1 355 -255 1744 164 0 48 chr10 60491600 60491910 -79824855 - AluJb SINE Alu -17 295 1 3820 95 19 14 chr10 60491910 60492150 -79824615 + MER4B LTR ERV1 355 592 -18 616 100 0 11 chr10 60492136 60492226 -79824539 + MER4B LTR ERV1 522 610 0 * 1060 167 16 0 chr10 60492226 60492412 -79824353 + LTR32 LTR ERVL 164 352 -119 800 205 0 6 chr10 60492497 60492653 -79824112 + LTR32 LTR ERVL 317 471 0 2268 145 73 0 chr10 60492700 60493099 -79823666 + MER68 LTR ERV1 135 562 0 459 113 0 0 chr10 60493431 60493511 -79823254 + (A)n Simple_repeat Simple_repeat 1 80 0 538 298 124 39 chr10 60493518 60493985 -79822780 + L2 LINE L2 2454 2960 -354 216 333 157 9 chr10 60494131 60494239 -79822526 + L2 LINE L2 3123 3246 -26 368 298 65 23 chr10 60494632 60494928 -79821837 + MLT1J2 LTR MaLR 55 401 -110 28 79 0 0 chr10 60495201 60495264 -79821501 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr10 60495510 60495535 -79821230 + (A)n Simple_repeat Simple_repeat 1 25 0 379 329 36 29 chr10 60495638 60495778 -79820987 + MIR3 SINE MIR 7 147 -61 501 239 116 56 chr10 60496939 60497190 -79819575 + MER46C DNA MER2_type 1 266 -72 1563 204 66 29 chr10 60497207 60497649 -79819116 + MLT1C LTR MaLR 3 460 -7 272 186 102 0 chr10 60497670 60497729 -79819036 + MER46C DNA MER2_type 273 337 -1 285 29 0 0 chr10 60498164 60498198 -79818567 + (CA)n Simple_repeat Simple_repeat 2 35 0 1690 213 59 42 chr10 60498594 60499068 -79817697 + MLT1D LTR MaLR 24 505 0 1520 168 95 0 chr10 60500121 60500395 -79816370 - AluJb SINE Alu -12 300 1 2089 112 11 0 chr10 60500424 60500709 -79816056 - AluSx SINE Alu -24 288 1 595 208 113 25 chr10 60500721 60500880 -79815885 - L2 LINE L2 -604 2710 2538 1122 104 18 6 chr10 60501347 60501510 -79815255 + AluY SINE Alu 139 303 -8 637 317 163 21 chr10 60501527 60502091 -79814674 - L2 LINE L2 -667 2647 2004 1263 119 72 20 chr10 60502114 60502365 -79814400 + L1MA5A LINE L1 6028 6291 -6 413 262 0 0 chr10 60502554 60502638 -79814127 + MIR SINE MIR 50 133 -75 310 200 0 0 chr10 60503313 60503373 -79813392 - L2 LINE L2 0 3272 3213 385 282 284 37 chr10 60503585 60503940 -79812825 + L2 LINE L2 2871 3313 0 539 239 29 7 chr10 60504528 60504666 -79812099 - Charlie8 DNA MER1_type -2153 264 124 184 284 24 79 chr10 60504721 60504848 -79811917 - L2 LINE L2 -4 3309 3190 245 308 0 0 chr10 60505000 60505065 -79811700 - MER5C DNA MER1_type -248 76 12 279 222 144 44 chr10 60505430 60505520 -79811245 + Charlie8 DNA MER1_type 1 99 -2318 636 274 85 0 chr10 60505647 60505859 -79810906 - MLT1I LTR MaLR -21 388 159 2210 98 0 10 chr10 60506832 60507127 -79809638 + AluSq SINE Alu 5 296 -17 205 279 44 0 chr10 60507334 60507402 -79809363 + L2 LINE L2 3237 3307 -6 517 252 31 8 chr10 60508126 60508253 -79808512 - L2 LINE L2 0 3313 3184 200 238 0 0 chr10 60509610 60509652 -79807113 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 60509928 60509949 -79806816 + (T)n Simple_repeat Simple_repeat 1 21 0 324 264 46 0 chr10 60510236 60510323 -79806442 + MIR SINE MIR 152 242 -20 443 281 49 27 chr10 60510489 60510674 -79806091 - Charlie8 DNA MER1_type -2145 272 84 351 65 0 0 chr10 60512611 60512657 -79804108 + (T)n Simple_repeat Simple_repeat 1 46 0 548 115 6 176 chr10 60512869 60512898 -79803867 + LTR45B LTR ERV1 3 35 -454 2441 71 0 0 chr10 60512898 60513193 -79803572 - AluY SINE Alu -16 295 1 548 115 6 176 chr10 60513193 60513345 -79803420 + LTR45B LTR ERV1 35 153 -336 2289 103 3 0 chr10 60513638 60513939 -79802826 + AluSq SINE Alu 1 302 -11 226 299 8 17 chr10 60513999 60514116 -79802649 + L1ME3 LINE L1 309 424 -5948 * 1439 248 66 5 chr10 60514112 60514519 -79802246 + L1ME3A LINE L1 5733 6164 -6 404 276 31 108 chr10 60514535 60514591 -79802174 + L1ME3 LINE L1 409 468 -5904 2181 106 11 0 chr10 60514591 60514875 -79801890 + AluSx SINE Alu 1 287 -25 404 276 31 108 chr10 60514875 60515242 -79801523 + L1ME3 LINE L1 468 799 -5573 2459 80 0 0 chr10 60515306 60515606 -79801159 - AluSc SINE Alu -9 300 1 431 202 79 0 chr10 60515608 60515722 -79801043 + L1ME1 LINE L1 6043 6165 -1 411 245 43 121 chr10 60515822 60516104 -79800661 + L1ME3 LINE L1 938 1197 -5175 2238 110 10 0 chr10 60516242 60516541 -79800224 + AluSq SINE Alu 1 302 -11 447 274 89 0 chr10 60516551 60516708 -79800057 - MER90 LTR ERV1 -200 375 205 812 262 24 28 chr10 60516881 60517205 -79799560 + L1ME3 LINE L1 1124 1495 -4877 517 109 0 11 chr10 60517229 60517321 -79799444 + L1PA15 LINE L1 6070 6160 -5 2049 147 0 0 chr10 60517326 60517625 -79799140 + AluSx SINE Alu 1 299 -13 397 293 70 45 chr10 60517673 60518203 -79798562 + L1ME3 LINE L1 2396 2938 -3444 524 224 59 122 chr10 60518251 60518488 -79798277 - MIR SINE MIR 0 262 41 432 267 88 52 chr10 60519116 60519759 -79797006 - L1MC5 LINE L1 -273 7688 7196 2427 106 3 0 chr10 60519764 60520112 -79796653 - AluSp SINE Alu 0 349 1 289 272 10 0 chr10 60520114 60520217 -79796548 - L1MC4 LINE L1 -842 7200 7097 608 293 84 45 chr10 60520341 60520905 -79795860 + L1ME3 LINE L1 3018 3941 -2441 772 292 50 10 chr10 60520907 60521205 -79795560 + MLT1J1 LTR MaLR 9 318 -128 477 274 120 41 chr10 60521206 60521280 -79795485 + L1ME3 LINE L1 5457 5524 -874 198 0 0 0 chr10 60521280 60521302 -79795463 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 477 274 120 41 chr10 60521302 60521348 -79795417 + L1ME3 LINE L1 5524 5565 -833 207 0 0 0 chr10 60521348 60521371 -79795394 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 477 274 120 41 chr10 60521371 60521525 -79795240 + L1ME3 LINE L1 5565 5706 -692 2297 110 0 0 chr10 60521525 60521824 -79794941 - AluSg1 SINE Alu -10 299 1 477 274 120 41 chr10 60521824 60522235 -79794530 + L1ME3 LINE L1 5706 6197 -201 327 241 25 0 chr10 60522327 60522406 -79794359 + 5S rRNA rRNA 4 84 -37 2362 103 0 3 chr10 60522458 60522769 -79793996 - AluSg SINE Alu 0 310 1 808 311 33 0 chr10 60522895 60523138 -79793627 - MER82 DNA MER2_type 0 653 403 1600 178 117 35 chr10 60523138 60523161 -79793604 + MSTB LTR MaLR 1 21 -405 2669 164 28 11 chr10 60523161 60523631 -79793134 - MER66A LTR ERV1 0 478 1 1600 178 117 35 chr10 60523631 60524001 -79792764 + MSTB LTR MaLR 21 426 0 2033 184 13 2 chr10 60524007 60524404 -79792361 - MER82 DNA MER2_type -252 401 1 10608 150 36 35 chr10 60524510 60526685 -79790080 + L1M4c LINE L1 24 2200 -4184 1875 188 107 28 chr10 60526683 60527141 -79789624 + L1MB2 LINE L1 5676 6169 -2 * 2262 87 0 7 chr10 60527239 60527559 -79789206 - AluSg SINE Alu 0 310 1 24 32 0 0 chr10 60528146 60528177 -79788588 + AT_rich Low_complexity Low_complexity 1 31 0 319 162 0 40 chr10 60528217 60528291 -79788474 + L1MC3 LINE L1 7705 7775 -10 2154 89 7 24 chr10 60528357 60528649 -79788116 - AluY SINE Alu -22 289 3 2849 224 14 10 chr10 60528678 60529300 -79787465 + MLT1E2 LTR MaLR 1 625 -1 298 299 24 16 chr10 60529445 60529572 -79787193 - LTR33 LTR ERVL 0 521 394 182 160 60 80 chr10 60529626 60529676 -79787089 + L2 LINE L2 3224 3272 0 3244 220 13 23 chr10 60530174 60530538 -79786227 + L1MB7 LINE L1 4114 4480 -1666 2136 92 41 14 chr10 60530538 60530833 -79785932 + AluSx SINE Alu 1 303 -9 3244 220 13 23 chr10 60530833 60531392 -79785373 + L1MB7 LINE L1 4480 5028 -1118 270 103 0 112 chr10 60531399 60531506 -79785259 - AluSp/q SINE Alu -2 301 207 2259 112 0 3 chr10 60532547 60532842 -79783923 + AluSq SINE Alu 1 294 -19 3007 192 40 27 chr10 60532856 60533774 -79782991 + L1MB7 LINE L1 5086 6025 -159 324 0 0 0 chr10 60533785 60533821 -79782944 + (CA)n Simple_repeat Simple_repeat 1 36 0 215 200 0 17 chr10 60533932 60533992 -79782773 + CT-rich Low_complexity Low_complexity 2 60 0 2249 45 7 18 chr10 60534066 60534399 -79782366 - AluY SINE Alu 0 330 1 21 0 0 0 chr10 60534399 60534420 -79782345 + AT_rich Low_complexity Low_complexity 1 21 0 2330 122 0 0 chr10 60534424 60534736 -79782029 - AluSx SINE Alu 0 312 1 4901 113 27 33 chr10 60534744 60535531 -79781234 - L1PA15 LINE L1 -8 6157 5374 2563 48 0 16 chr10 60535531 60535846 -79780919 - AluY SINE Alu -1 310 1 4901 113 27 33 chr10 60535846 60535905 -79780860 - L1PA15 LINE L1 -791 5374 5316 2033 102 3 14 chr10 60535992 60536277 -79780488 - AluY SINE Alu -29 282 1 1364 283 54 16 chr10 60536317 60536762 -79780003 - LTR16B LTR ERVL 0 464 3 387 268 226 24 chr10 60536893 60537061 -79779704 + L1M4 LINE L1 3684 3885 -2261 318 302 57 94 chr10 60537150 60537346 -79779419 + L1M4 LINE L1 4745 4926 -1220 1985 166 0 3 chr10 60537346 60537659 -79779106 - AluJo SINE Alu 0 312 1 318 302 57 94 chr10 60537659 60537780 -79778985 + L1M4 LINE L1 4926 5050 -1096 1440 222 62 53 chr10 60539051 60539565 -79777200 - MER39 LTR ERV1 -9 698 1 32 26 0 0 chr10 60539658 60539697 -79777068 + AT_rich Low_complexity Low_complexity 1 39 0 1726 176 3 14 chr10 60540159 60540454 -79776311 - AluJo SINE Alu -20 292 1 727 254 65 106 chr10 60540466 60541530 -79775235 + L1MC4 LINE L1 7025 8042 0 303 224 0 0 chr10 60541996 60542072 -79774693 + MER116 DNA Mariner 1 76 -4 716 324 109 27 chr10 60542084 60542268 -79774497 - L3 LINE CR1 -75 1502 1334 2326 58 0 64 chr10 60542268 60542595 -79774170 - AluSq SINE Alu -7 306 1 716 324 109 27 chr10 60542595 60542610 -79774155 - L3 LINE CR1 -243 1334 1322 2136 96 3 0 chr10 60542610 60542901 -79773864 - AluY SINE Alu -19 292 1 716 324 109 27 chr10 60542901 60543067 -79773698 - L3 LINE CR1 -255 1322 1106 679 188 88 28 chr10 60543106 60543287 -79773478 - MER20 DNA MER1_type -21 198 7 1948 135 0 11 chr10 60543828 60544110 -79772655 - AluSg SINE Alu -31 279 1 683 293 92 4 chr10 60544298 60544537 -79772228 + MIR SINE MIR 3 262 0 2385 136 23 42 chr10 60544612 60544846 -79771919 - MSTB LTR MaLR 0 426 202 2066 122 14 14 chr10 60544846 60545006 -79771759 - AluSq SINE Alu -17 296 134 2157 118 6 29 chr10 60545006 60545321 -79771444 - AluSx SINE Alu -4 308 1 2066 122 14 14 chr10 60545321 60545456 -79771309 - AluSq SINE Alu -178 135 1 2385 136 23 42 chr10 60545456 60545655 -79771110 - MSTB LTR MaLR -224 202 1 212 211 58 0 chr10 60545697 60545749 -79771016 - L3 LINE CR1 -732 845 791 1154 188 39 0 chr10 60545857 60546065 -79770700 + MER20 DNA MER1_type 1 216 -3 504 326 39 6 chr10 60546081 60546259 -79770506 - L3 LINE CR1 -767 810 627 687 293 29 37 chr10 60546282 60546528 -79770237 + MIR SINE MIR 2 245 -17 1779 150 0 38 chr10 60546575 60546868 -79769897 - AluJo SINE Alu -30 282 1 2119 116 13 17 chr10 60547037 60547338 -79769427 - AluSg SINE Alu -10 300 1 2535 56 0 0 chr10 60547562 60547865 -79768900 - AluY SINE Alu -8 303 1 198 0 0 0 chr10 60548736 60548758 -79768007 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 180 302 75 0 chr10 60548824 60548877 -79767888 + L2 LINE L2 2767 2823 -491 1108 130 36 20 chr10 60548905 60549246 -79767519 - L1M4 LINE L1 -724 5430 5102 1488 186 136 0 chr10 60549537 60549876 -79766889 - MER57A LTR ERV1 -11 392 8 425 302 224 12 chr10 60549884 60550126 -79766639 - L2 LINE L2 -297 3016 2736 355 185 111 44 chr10 60550153 60550288 -79766477 + L1MC5 LINE L1 7787 7930 -31 585 238 99 22 chr10 60550293 60550474 -79766291 - L2 LINE L2 -615 2699 2505 853 205 0 43 chr10 60550474 60550659 -79766106 + AluJb SINE Alu 132 308 -4 708 263 27 0 chr10 60550929 60551115 -79765650 - L2 LINE L2 -945 2369 2179 2089 123 13 0 chr10 60551198 60551499 -79765266 - AluSx SINE Alu -6 306 2 252 100 0 0 chr10 60551499 60551539 -79765226 + (CA)n Simple_repeat Simple_repeat 1 40 0 197 319 55 11 chr10 60552011 60552102 -79764663 + MER5A DNA MER1_type 56 150 -39 * 268 364 20 0 chr10 60552022 60552121 -79764644 - MER5A DNA MER1_type -58 131 31 480 291 88 63 chr10 60552663 60552791 -79763974 + L2 LINE L2 2649 2772 -541 2445 105 0 0 chr10 60552791 60553104 -79763661 - AluSq SINE Alu 0 313 1 480 291 88 63 chr10 60553104 60553316 -79763449 + L2 LINE L2 2772 2996 -317 463 293 44 44 chr10 60553350 60553555 -79763210 + L2 LINE L2 3109 3313 0 1933 135 3 7 chr10 60554477 60554788 -79761977 - AluSx SINE Alu 0 310 1 983 240 4 26 chr10 60554788 60555055 -79761710 + MLT2B1 LTR ERVL 2 262 -258 240 143 0 0 chr10 60555067 60555109 -79761656 + (TG)n Simple_repeat Simple_repeat 2 43 0 360 181 0 2 chr10 60555371 60555448 -79761317 + L1ME3A LINE L1 5825 5900 -264 1709 157 4 0 chr10 60555494 60555749 -79761016 + AluJb SINE Alu 29 284 -28 2091 210 84 8 chr10 60555832 60556474 -79760291 - MER97a DNA MER1_type? 0 894 204 2355 189 86 21 chr10 60556474 60557125 -79759640 - Charlie1a DNA MER1_type 0 1455 763 2839 53 8 0 chr10 60557329 60557688 -79759077 - L1PA7 LINE L1 0 6154 5793 197 128 21 0 chr10 60557690 60557737 -79759028 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2104 115 7 3 chr10 60558376 60558671 -79758094 - AluSq SINE Alu -17 296 1 1562 194 112 19 chr10 60559268 60559696 -79757069 - Charlie1a DNA MER1_type -683 772 305 471 187 207 0 chr10 60559724 60559874 -79756891 - L1MA9 LINE L1 0 6312 6132 23 54 0 0 chr10 60559893 60559930 -79756835 + AT_rich Low_complexity Low_complexity 1 37 0 2245 98 3 23 chr10 60559945 60560251 -79756514 - AluSp SINE Alu -13 300 1 1072 225 36 36 chr10 60560257 60560564 -79756201 - Charlie1a DNA MER1_type -1137 318 12 876 223 29 10 chr10 60560566 60560772 -79755993 - MER97c DNA MER1_type? -880 210 1 483 209 0 0 chr10 60560779 60560884 -79755881 - L1M4 LINE L1 -915 5231 5127 274 145 101 14 chr10 60560895 60560964 -79755801 - L1M4 LINE L1 -2303 3843 3769 * 336 178 42 76 chr10 60560961 60561006 -79755759 + L1M4 LINE L1 3874 3919 -2227 2346 78 7 10 chr10 60561006 60561313 -79755452 - AluY SINE Alu -5 306 1 336 178 42 76 chr10 60561313 60561385 -79755380 + L1M4 LINE L1 3919 3987 -2159 534 283 34 19 chr10 60561387 60561652 -79755113 - L1M4 LINE L1 -2492 3654 3386 1322 150 16 4 chr10 60561657 60561903 -79754862 - L1MB7 LINE L1 -9 6175 5927 272 176 162 0 chr10 60561930 60562004 -79754761 - Charlie1 DNA MER1_type -1065 1696 1611 342 230 30 20 chr10 60562004 60562104 -79754661 - MLT1F1 LTR MaLR -466 101 1 308 282 0 24 chr10 60562667 60562752 -79754013 + CT-rich Low_complexity Low_complexity 5 87 0 226 167 0 0 chr10 60562911 60562953 -79753812 - MLT1K LTR MaLR -387 201 160 241 253 24 60 chr10 60563027 60563110 -79753655 + L2 LINE L2 3193 3272 0 279 0 0 0 chr10 60563823 60563854 -79752911 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5291 132 70 3 chr10 60564371 60565342 -79751423 - L1MA6 LINE L1 -6 6294 5259 409 259 30 23 chr10 60565402 60565533 -79751232 - L2 LINE L2 -719 2595 2464 1708 202 0 3 chr10 60565937 60566224 -79750541 + AluJo SINE Alu 1 286 -26 306 284 41 77 chr10 60566498 60566667 -79750098 + MIR SINE MIR 81 243 -19 262 186 0 0 chr10 60566649 60566692 -79750073 - MIR SINE MIR -11 251 209 * 1338 227 42 85 chr10 60566705 60567234 -79749531 - MLT1H LTR MaLR -38 511 6 556 248 186 0 chr10 60567255 60567400 -79749365 - MIR SINE MIR -70 192 21 327 256 58 16 chr10 60567431 60567552 -79749213 + MLT1I LTR MaLR 1 126 -283 2234 94 0 11 chr10 60567845 60568132 -79748633 + AluSc SINE Alu 1 284 -25 332 333 8 16 chr10 60568136 60568262 -79748503 - HAL1b LINE L1 -27 1321 1197 519 295 101 53 chr10 60568430 60568657 -79748108 + MIR SINE MIR 19 256 -6 2137 142 7 0 chr10 60568713 60569023 -79747742 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 60569974 60570002 -79746763 + AT_rich Low_complexity Low_complexity 1 28 0 1841 5 0 0 chr10 60571311 60571511 -79745254 + AluYb8 SINE Alu 114 313 -5 223 333 56 103 chr10 60572624 60572693 -79744072 - L2 LINE L2 -9 3263 3192 1899 151 0 24 chr10 60572693 60572991 -79743774 + AluJb SINE Alu 1 291 -21 223 333 56 103 chr10 60572991 60573260 -79743505 - L2 LINE L2 -80 3192 2941 2114 126 0 3 chr10 60573366 60573668 -79743097 + AluSq SINE Alu 1 301 -12 355 184 19 87 chr10 60573717 60573820 -79742945 - L2 LINE L2 -54 3259 3164 2390 104 0 0 chr10 60573822 60574131 -79742634 + AluSq SINE Alu 1 309 -4 1829 268 60 38 chr10 60574577 60575482 -79741283 + L2 LINE L2 2378 3313 0 292 212 82 0 chr10 60575708 60575793 -79740972 - L2 LINE L2 -179 3134 3043 730 192 0 8 chr10 60625845 60625975 -79690790 + AluJb SINE Alu 172 300 -12 1916 154 0 35 chr10 60627198 60627516 -79689249 - AluJo SINE Alu -5 307 1 1725 159 48 7 chr10 60628377 60628648 -79688117 + AluJo SINE Alu 1 282 -30 429 203 114 16 chr10 60629721 60629844 -79686921 + MIR SINE MIR 114 248 -14 218 184 0 0 chr10 60630059 60630097 -79686668 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 189 266 76 51 chr10 60630115 60630194 -79686571 - L2 LINE L2 -46 3226 3146 275 276 119 30 chr10 60630256 60630390 -79686375 - MLT1J2 LTR MaLR -33 417 272 279 223 180 69 chr10 60632813 60633046 -79683719 + L1ME3A LINE L1 5911 6169 -1 268 282 141 20 chr10 60633056 60633205 -79683560 + MIR3 SINE MIR 3 169 -39 474 305 71 43 chr10 60633891 60634136 -79682629 + MLT1K LTR MaLR 140 398 -190 2152 122 18 73 chr10 60634136 60634521 -79682244 + THE1B LTR MaLR 1 364 0 474 305 71 43 chr10 60634521 60634600 -79682165 + MLT1K LTR MaLR 398 473 -115 391 332 80 11 chr10 60636925 60637112 -79679653 + MIR SINE MIR 28 227 -35 202 303 225 11 chr10 60637444 60637622 -79679143 - L3b LINE CR1 -206 1377 1162 1745 174 51 68 chr10 60637770 60638224 -79678541 + MER113 DNA MER1_type? 3 448 -73 395 257 44 7 chr10 60638376 60638512 -79678253 + MIR SINE MIR 31 171 -91 599 191 21 14 chr10 60638666 60638807 -79677958 + MIR SINE MIR 88 229 -33 762 244 67 10 chr10 60639098 60639291 -79677474 + MER63A DNA MER1_type 2 205 -5 375 300 53 12 chr10 60639338 60639499 -79677266 + MIR SINE MIR 20 182 -55 359 301 27 41 chr10 60639582 60639728 -79677037 + MIR3 SINE MIR 46 189 -19 1698 185 7 3 chr10 60640674 60640972 -79675793 - AluJo SINE Alu -12 300 2 26 82 0 0 chr10 60641145 60641206 -79675559 + AT_rich Low_complexity Low_complexity 1 61 0 467 258 13 69 chr10 60641614 60641773 -79674992 - MIR SINE MIR -2 260 111 26 64 0 0 chr10 60641954 60642001 -79674764 + AT_rich Low_complexity Low_complexity 1 47 0 545 196 22 65 chr10 60642645 60642701 -79674064 + MER2 DNA MER2_type 209 266 -79 2365 92 0 0 chr10 60642701 60642994 -79673771 - AluSx SINE Alu -19 293 1 545 196 22 65 chr10 60642994 60643075 -79673690 + MER2 DNA MER2_type 266 340 -5 2331 164 76 9 chr10 60643391 60643823 -79672942 + LOR1b LTR ERV1 1 461 0 230 304 19 42 chr10 60644079 60644190 -79672575 - MER5B DNA MER1_type -51 138 20 225 319 44 0 chr10 60644216 60644307 -79672458 - MIR SINE MIR 0 262 168 201 159 43 0 chr10 60644762 60644801 -79671964 + MIR SINE MIR 48 90 -118 2210 136 20 23 chr10 60644934 60645279 -79671486 - MER2 DNA MER2_type 0 344 1 546 292 30 6 chr10 60645766 60645934 -79670831 - MIR SINE MIR -13 249 78 226 162 0 0 chr10 60646011 60646048 -79670717 + AluSp SINE Alu 1 37 -265 2236 107 0 23 chr10 60646048 60646356 -79670409 - AluSg SINE Alu -9 301 1 2161 89 4 0 chr10 60646356 60646627 -79670138 + AluSp SINE Alu 27 298 -15 924 247 71 42 chr10 60646655 60647166 -79669599 - L1ME LINE L1 -285 5885 5237 1334 83 0 18 chr10 60648315 60648483 -79668282 - AluSx SINE Alu -127 185 21 854 155 13 65 chr10 60648484 60648507 -79668258 - MER2 DNA MER2_type -197 148 125 3373 89 43 7 chr10 60648507 60648903 -79667862 + MLT2A2 LTR ERVL 1 416 -37 369 0 0 0 chr10 60648903 60648944 -79667821 + (TA)n Simple_repeat Simple_repeat 2 42 0 3373 89 43 7 chr10 60648944 60648984 -79667781 + MLT2A2 LTR ERVL 416 453 0 16068 120 31 15 chr10 60648985 60650152 -79666613 + Tigger1 DNA MER2_type 1 1148 -1270 2123 142 0 0 chr10 60650152 60650455 -79666310 + AluSx SINE Alu 3 305 -7 16068 120 31 15 chr10 60650455 60651294 -79665471 + Tigger1 DNA MER2_type 1148 2053 -365 2432 86 3 0 chr10 60651294 60651597 -79665168 - AluSp SINE Alu -9 304 1 16068 120 31 15 chr10 60651597 60651968 -79664797 + Tigger1 DNA MER2_type 2053 2417 -1 854 155 13 65 chr10 60651968 60652097 -79664668 - MER2 DNA MER2_type -219 126 2 441 0 0 0 chr10 60652141 60652190 -79664575 + (TG)n Simple_repeat Simple_repeat 2 50 0 549 219 125 12 chr10 60652786 60652946 -79663819 + MIR SINE MIR 75 252 -10 2333 87 7 0 chr10 60654189 60654489 -79662276 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 60654621 60654649 -79662116 + (T)n Simple_repeat Simple_repeat 1 28 0 1338 126 30 56 chr10 60655763 60655994 -79660771 + AluJb SINE Alu 7 231 -81 201 247 278 10 chr10 60656915 60657012 -79659753 - L2 LINE L2 -3 3310 3188 758 278 47 5 chr10 60658178 60658390 -79658375 + MLT1K LTR MaLR 35 255 -333 883 215 111 97 chr10 60658484 60658782 -79657983 + MLT1K LTR MaLR 281 582 -6 373 274 171 0 chr10 60659233 60659350 -79657415 - MER91C DNA MER1_type -3 137 1 228 167 0 21 chr10 60660123 60660148 -79656617 + GA-rich Low_complexity Low_complexity 4 29 -21 2359 95 3 13 chr10 60660148 60660454 -79656311 + AluSq SINE Alu 1 303 -10 228 167 0 21 chr10 60660454 60660476 -79656289 + GA-rich Low_complexity Low_complexity 29 50 0 2116 111 51 26 chr10 60660500 60660852 -79655913 - L1PA16 LINE L1 0 6166 5806 2265 108 3 10 chr10 60661404 60661718 -79655047 - AluSx SINE Alu 0 312 1 2127 168 76 35 chr10 60661733 60662167 -79654598 - LTR47A LTR ERVL 0 452 1 1805 207 15 6 chr10 60662393 60662736 -79654029 - MSTD LTR MaLR -50 346 1 1714 181 0 33 chr10 60663095 60663399 -79653366 + AluJo SINE Alu 3 296 -16 2288 172 47 58 chr10 60663779 60664245 -79652520 - LOR1b LTR ERV1 0 461 1 2464 84 3 0 chr10 60665225 60665533 -79651232 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr10 60665862 60665901 -79650864 + AT_rich Low_complexity Low_complexity 1 39 0 468 242 75 0 chr10 60666300 60666420 -79650345 - MIR SINE MIR -80 182 54 340 262 123 14 chr10 60666424 60666580 -79650185 - MIR3 SINE MIR -85 123 4 2117 104 0 0 chr10 60667610 60667911 -79648854 + AluSc SINE Alu 1 301 0 246 208 0 0 chr10 60668100 60668153 -79648612 + MLT1J LTR MaLR 426 478 -33 213 191 24 0 chr10 60668252 60668294 -79648471 + MIR SINE MIR 108 150 -112 500 223 27 0 chr10 60668453 60668565 -79648200 - MIR SINE MIR -94 168 54 1392 214 28 68 chr10 60668769 60669227 -79647538 + L1MC5 LINE L1 6704 7143 -818 1808 164 3 10 chr10 60669233 60669532 -79647233 + AluJb SINE Alu 1 297 -15 826 232 70 55 chr10 60669583 60669911 -79646854 + L1MC5 LINE L1 7160 7492 -469 543 291 96 14 chr10 60669956 60670176 -79646589 + MIR SINE MIR 21 258 -4 2070 97 3 66 chr10 60670177 60670496 -79646269 - AluSg SINE Alu -11 299 1 186 217 17 33 chr10 60671022 60671082 -79645683 + L3 LINE CR1 634 692 -885 216 0 0 0 chr10 60671443 60671467 -79645298 + (T)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr10 60671967 60671994 -79644771 + (T)n Simple_repeat Simple_repeat 1 27 0 353 343 102 13 chr10 60672454 60672690 -79644075 - L1MC/D LINE L1 -1990 5818 5562 409 281 79 73 chr10 60673064 60673367 -79643398 + MLT1K LTR MaLR 31 335 -253 13312 148 28 11 chr10 60673421 60676912 -79639853 + L1MA3 LINE L1 2751 6302 -3 21 0 0 0 chr10 60676925 60676946 -79639819 + AT_rich Low_complexity Low_complexity 1 21 0 2359 104 3 0 chr10 60677865 60678173 -79638592 + AluSp SINE Alu 1 309 -4 223 200 387 0 chr10 60679616 60679691 -79637074 - L2 LINE L2 -1 3271 3168 1742 174 3 7 chr10 60679725 60680024 -79636741 + AluJo SINE Alu 1 298 -14 2159 100 0 0 chr10 60680388 60680669 -79636096 + AluSx SINE Alu 2 282 -30 241 35 0 0 chr10 60680669 60680698 -79636067 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 211 176 0 0 chr10 60680771 60680805 -79635960 + C-rich Low_complexity Low_complexity 3 36 0 810 98 0 0 chr10 60681825 60681947 -79634818 - L1MA4 LINE L1 -19 6281 6160 583 311 102 4 chr10 60682323 60682587 -79634178 + L2 LINE L2 2251 2540 -774 941 186 161 113 chr10 60682631 60682932 -79633833 - MSTD LTR MaLR -3 393 69 2216 92 7 3 chr10 60682932 60683227 -79633538 - AluSg1 SINE Alu -13 296 1 941 186 161 113 chr10 60683227 60683297 -79633468 - MSTD LTR MaLR -327 69 4 2090 125 0 7 chr10 60683633 60683936 -79632829 + AluSq SINE Alu 1 301 -12 2018 128 10 0 chr10 60684418 60684706 -79632059 + AluSg SINE Alu 1 291 -19 637 317 163 21 chr10 60685839 60686403 -79630362 - L2 LINE L2 -667 2647 2004 1263 119 72 20 chr10 60686426 60686677 -79630088 + L1MA5A LINE L1 6028 6291 -6 413 262 0 0 chr10 60686866 60686950 -79629815 + MIR SINE MIR 50 133 -75 310 200 0 0 chr10 60687625 60687685 -79629080 - L2 LINE L2 0 3272 3213 408 239 45 0 chr10 60688236 60688324 -79628441 + L2 LINE L2 3222 3313 0 539 239 29 7 chr10 60688912 60689050 -79627715 - Charlie8 DNA MER1_type -2142 275 135 184 284 24 79 chr10 60689105 60689232 -79627533 - L2 LINE L2 -4 3309 3190 245 308 0 0 chr10 60689384 60689449 -79627316 - MER5C DNA MER1_type -248 76 12 279 222 144 44 chr10 60689814 60689904 -79626861 + Charlie8 DNA MER1_type 1 99 -2318 636 274 85 0 chr10 60690031 60690243 -79626522 - MLT1I LTR MaLR -21 388 159 2210 98 0 10 chr10 60691216 60691511 -79625254 + AluSq SINE Alu 5 296 -17 205 279 44 0 chr10 60691718 60691786 -79624979 + L2 LINE L2 3237 3307 -6 517 252 31 8 chr10 60692510 60692637 -79624128 - L2 LINE L2 0 3313 3184 200 238 0 0 chr10 60693994 60694036 -79622729 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 60694312 60694333 -79622432 + (T)n Simple_repeat Simple_repeat 1 21 0 324 264 46 0 chr10 60694620 60694707 -79622058 + MIR SINE MIR 152 242 -20 443 281 49 27 chr10 60694873 60695058 -79621707 - Charlie8 DNA MER1_type -2145 272 84 351 65 0 0 chr10 60696885 60696931 -79619834 + (T)n Simple_repeat Simple_repeat 1 46 0 1338 147 56 31 chr10 60697143 60697172 -79619593 + LTR45B LTR ERV1 3 30 -459 2441 71 0 0 chr10 60697172 60697467 -79619298 - AluY SINE Alu -16 295 1 1338 147 56 31 chr10 60697467 60697828 -79618937 + LTR45B LTR ERV1 30 444 -45 322 233 35 35 chr10 60697944 60698030 -79618735 + MIR3 SINE MIR 91 176 -32 2333 104 0 19 chr10 60699219 60699535 -79617230 - AluSx SINE Alu -2 310 1 2200 96 0 47 chr10 60700245 60700567 -79616198 + AluSx SINE Alu 1 307 -5 596 243 15 7 chr10 60700849 60700985 -79615780 + MER5B DNA MER1_type 1 137 -41 2119 122 6 10 chr10 60701121 60701433 -79615332 - AluSx SINE Alu -1 311 1 301 271 29 0 chr10 60701434 60701504 -79615261 - MER5A DNA MER1_type -113 76 5 218 322 0 0 chr10 60701787 60701846 -79614919 + CT-rich Low_complexity Low_complexity 2 60 0 485 245 45 115 chr10 60702155 60702258 -79614507 - MIR SINE MIR -44 218 134 2138 121 0 31 chr10 60702258 60702580 -79614185 - AluSx SINE Alu 0 312 1 485 245 45 115 chr10 60702580 60702676 -79614089 - MIR SINE MIR -128 134 33 1102 92 7 0 chr10 60702735 60702877 -79613888 + AluSp SINE Alu 1 143 -170 49 52 0 0 chr10 60702877 60702954 -79613811 + AT_rich Low_complexity Low_complexity 1 77 0 2443 83 0 3 chr10 60703451 60703763 -79613002 - AluY SINE Alu 0 311 1 971 313 157 23 chr10 60703774 60704342 -79612423 + L2 LINE L2 2111 2754 -560 277 26 51 0 chr10 60704373 60704412 -79612353 - L1PA13 LINE L1 -14 6149 6109 * 4671 120 20 21 chr10 60704401 60705142 -79611623 - L1PA14 LINE L1 -74 6087 5346 2156 129 10 0 chr10 60705142 60705444 -79611321 + AluSx SINE Alu 1 305 -7 4671 120 20 21 chr10 60705444 60705503 -79611262 - L1PA14 LINE L1 -815 5346 5288 752 171 32 0 chr10 60705501 60705659 -79611106 + L1PA14 LINE L1 5121 5283 -863 * 197 300 0 0 chr10 60705665 60705715 -79611050 + L2 LINE L2 2764 2813 -501 620 360 72 30 chr10 60705855 60706216 -79610549 + L2 LINE L2 2897 3272 0 536 315 68 32 chr10 60706616 60706867 -79609898 + MIR SINE MIR 3 262 0 404 308 28 47 chr10 60706892 60707103 -79609662 + MIR SINE MIR 6 212 -50 458 333 14 34 chr10 60708128 60708335 -79608430 + L2 LINE L2 2588 2790 -524 323 287 64 11 chr10 60708338 60708432 -79608333 + L2 LINE L2 2987 3085 -187 692 290 43 5 chr10 60708441 60708648 -79608117 + MIR SINE MIR 28 242 -20 209 283 10 61 chr10 60708787 60708886 -79607879 + MIR3 SINE MIR 108 201 -7 193 308 62 0 chr10 60712324 60712389 -79604376 + L3b LINE CR1 1423 1491 -92 2480 50 0 3 chr10 60713836 60714134 -79602631 - AluY SINE Alu -14 297 1 1276 144 10 0 chr10 60715483 60715691 -79601074 + MER2 DNA MER2_type 1 210 -135 344 303 46 9 chr10 60715783 60715892 -79600873 + MIR3 SINE MIR 14 126 -82 2298 91 0 0 chr10 60716336 60716622 -79600143 + AluSc SINE Alu 3 288 -21 201 74 0 0 chr10 60718684 60718711 -79598054 + (T)n Simple_repeat Simple_repeat 1 27 0 201 74 0 0 chr10 60718807 60718834 -79597931 + (TG)n Simple_repeat Simple_repeat 2 28 0 1657 89 133 12 chr10 60719106 60719375 -79597390 + AluSg1 SINE Alu 1 299 0 26 50 0 0 chr10 60722103 60722143 -79594622 + AT_rich Low_complexity Low_complexity 1 40 0 260 238 209 19 chr10 60722317 60722422 -79594343 + MIR SINE MIR 19 143 -65 2253 111 3 0 chr10 60723215 60723513 -79593252 + AluSx SINE Alu 1 299 -13 1464 187 55 14 chr10 60723769 60724058 -79592707 + AluJb SINE Alu 1 301 -11 1864 116 0 4 chr10 60725783 60726034 -79590731 - AluSx SINE Alu -14 298 49 21 0 0 0 chr10 60726183 60726204 -79590561 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 60727316 60727353 -79589412 + AT_rich Low_complexity Low_complexity 1 37 0 2209 110 0 7 chr10 60729011 60729311 -79587454 + AluSx SINE Alu 1 298 -14 1652 171 28 3 chr10 60731535 60731658 -79585107 + AluJb SINE Alu 1 120 -192 357 24 0 0 chr10 60731658 60731700 -79585065 + (CAA)n Simple_repeat Simple_repeat 3 44 0 1652 171 28 3 chr10 60731700 60731862 -79584903 + AluJb SINE Alu 120 293 -19 309 300 31 8 chr10 60732452 60732582 -79584183 + L1ME LINE L1 5572 5704 -417 1868 146 29 4 chr10 60733906 60734187 -79582578 - AluSx SINE Alu -8 304 17 32 81 0 0 chr10 60734211 60734285 -79582480 + AT_rich Low_complexity Low_complexity 1 74 0 325 263 47 29 chr10 60734320 60734491 -79582274 - MER113 DNA MER1_type? -337 184 11 21 0 0 0 chr10 60734835 60734856 -79581909 + AT_rich Low_complexity Low_complexity 1 21 0 426 85 0 0 chr10 60735936 60735995 -79580770 + (TGG)n Simple_repeat Simple_repeat 1 59 0 468 0 0 0 chr10 60746186 60746238 -79570527 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 36 0 0 chr10 60746634 60746662 -79570103 + AT_rich Low_complexity Low_complexity 1 28 0 230 250 0 0 chr10 60746812 60746860 -79569905 + GA-rich Low_complexity Low_complexity 1 48 0 1938 103 10 41 chr10 60748116 60748407 -79568358 - AluSx SINE Alu -30 282 1 604 126 9 18 chr10 60748752 60748863 -79567902 + HY1 scRNA scRNA 1 110 -2 2213 100 13 3 chr10 60751140 60751427 -79565338 + AluSg SINE Alu 1 293 -17 207 0 0 0 chr10 60751427 60751450 -79565315 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2213 100 13 3 chr10 60751450 60751463 -79565302 + AluSg SINE Alu 293 304 -6 21 0 0 0 chr10 60752470 60752491 -79564274 + AT_rich Low_complexity Low_complexity 1 21 0 2555 56 3 0 chr10 60752622 60752926 -79563839 - AluSq SINE Alu -8 305 1 225 196 0 0 chr10 60753975 60754021 -79562744 + A-rich Low_complexity Low_complexity 1 46 0 2147 114 3 0 chr10 60755445 60755734 -79561031 - AluSp SINE Alu -21 292 3 21 82 0 0 chr10 60755836 60755885 -79560880 + AT_rich Low_complexity Low_complexity 1 49 0 507 33 0 0 chr10 60756471 60756532 -79560233 + (TG)n Simple_repeat Simple_repeat 2 62 0 365 334 59 44 chr10 60756901 60757052 -79559713 + L1MC/D LINE L1 4877 5024 -1122 2131 104 17 3 chr10 60757052 60757339 -79559426 + AluSg SINE Alu 1 291 -19 365 334 59 44 chr10 60757339 60757528 -79559237 + L1MC/D LINE L1 5024 5222 -924 359 251 88 77 chr10 60757576 60757919 -79558846 + L1MC/D LINE L1 5288 5636 -528 2043 111 17 3 chr10 60757928 60758216 -79558549 - AluSx SINE Alu -19 293 2 303 319 17 8 chr10 60758216 60758335 -79558430 + L1MC/D LINE L1 5704 5823 -1985 339 280 149 47 chr10 60758340 60758636 -79558129 - L2 LINE L2 0 3313 2988 2367 84 0 0 chr10 60758742 60759040 -79557725 - AluSc SINE Alu -11 298 1 2182 110 0 0 chr10 60759741 60760047 -79556718 - AluSx SINE Alu 0 306 1 1999 141 3 32 chr10 60761193 60761505 -79555260 - AluSx SINE Alu -9 303 1 1715 193 3 7 chr10 60762400 60762695 -79554070 - AluJo SINE Alu -18 294 1 22 0 0 0 chr10 60762698 60762720 -79554045 + AT_rich Low_complexity Low_complexity 1 22 0 2155 122 3 0 chr10 60762905 60763223 -79553542 + AluSx SINE Alu 1 319 0 263 291 134 24 chr10 60763503 60763630 -79553135 - MER5A DNA MER1_type -5 184 44 346 292 62 9 chr10 60764128 60764241 -79552524 - MIR3 SINE MIR -45 163 45 297 318 95 16 chr10 60765022 60765211 -79551554 + MIR SINE MIR 33 236 -26 29 28 0 0 chr10 60765675 60765711 -79551054 + AT_rich Low_complexity Low_complexity 1 36 0 310 326 123 44 chr10 60766300 60766527 -79550238 - L2 LINE L2 -1 3271 3027 198 0 0 0 chr10 60767248 60767270 -79549495 + (T)n Simple_repeat Simple_repeat 1 22 0 476 140 32 0 chr10 60767871 60767964 -79548801 - MER33 DNA MER1_type -2 322 227 644 158 35 18 chr10 60767964 60768078 -79548687 - FLAM_A SINE Alu -9 133 18 702 205 54 31 chr10 60768078 60768301 -79548464 - MER33 DNA MER1_type -252 72 1 402 339 76 0 chr10 60769187 60769305 -79547460 - MER91A DNA MER1_type -16 180 54 597 302 82 13 chr10 60769337 60769569 -79547196 - MIR SINE MIR -10 252 5 2320 77 7 10 chr10 60769967 60770264 -79546501 - AluSc SINE Alu -13 296 1 2077 123 27 0 chr10 60770894 60771227 -79545538 + L1PA13 LINE L1 5788 6129 -34 1032 82 0 0 chr10 60771266 60771443 -79545322 + AluSg/x SINE Alu 179 355 0 316 347 31 0 chr10 60771443 60771541 -79545224 + MIR SINE MIR 42 142 -66 499 231 69 52 chr10 60771794 60771967 -79544798 - MIR SINE MIR -1 261 86 300 153 97 14 chr10 60772044 60772116 -79544649 + L1MB7 LINE L1 6101 6178 -6 216 229 21 0 chr10 60773257 60773305 -79543460 - L2 LINE L2 0 3313 3265 24 32 0 0 chr10 60774176 60774207 -79542558 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 60774634 60774663 -79542102 + AT_rich Low_complexity Low_complexity 1 29 0 246 128 0 0 chr10 60774759 60774798 -79541967 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 60775218 60775248 -79541517 + AT_rich Low_complexity Low_complexity 1 30 0 192 77 0 0 chr10 60778017 60778043 -79538722 + (CA)n Simple_repeat Simple_repeat 2 27 0 359 274 21 11 chr10 60778116 60778211 -79538554 + L2 LINE L2 3177 3272 0 300 333 39 61 chr10 60780008 60780320 -79536445 + L1ME LINE L1 902 1206 -5210 392 289 60 42 chr10 60780353 60780594 -79536171 + L1ME LINE L1 1150 1563 -5044 314 333 17 25 chr10 60780697 60780817 -79535948 + HAL1 LINE L1 330 448 -2059 674 260 210 25 chr10 60780834 60781311 -79535454 + HAL1 LINE L1 517 1081 -1426 2251 254 106 21 chr10 60781352 60782203 -79534562 + HAL1 LINE L1 1167 2135 -372 2309 78 20 3 chr10 60782203 60782498 -79534267 + AluSx SINE Alu 1 300 -12 2251 254 106 21 chr10 60782498 60782906 -79533859 + HAL1 LINE L1 2135 2507 0 2023 145 0 25 chr10 60784148 60784466 -79532299 + AluSx SINE Alu 1 310 -2 5988 134 14 36 chr10 60784479 60786077 -79530688 + L1MA3 LINE L1 4509 6063 -242 1771 176 7 0 chr10 60786077 60786373 -79530392 + AluJb SINE Alu 1 298 -14 5988 134 14 36 chr10 60786373 60786606 -79530159 + L1MA3 LINE L1 6063 6300 -5 281 329 35 0 chr10 60787206 60787291 -79529474 + MIR SINE MIR 60 147 -115 207 207 12 98 chr10 60787732 60787814 -79528951 - MIR SINE MIR -119 143 69 280 339 58 17 chr10 60788591 60788765 -79528000 + MIR SINE MIR 36 216 -46 2035 110 3 57 chr10 60788823 60789141 -79527624 - AluSx SINE Alu -11 301 1 374 268 77 73 chr10 60789396 60789619 -79527146 + MIR SINE MIR 8 234 -28 21 0 0 0 chr10 60789775 60789796 -79526969 + AT_rich Low_complexity Low_complexity 1 21 0 2220 129 0 6 chr10 60791072 60791383 -79525382 + AluSx SINE Alu 3 311 -1 481 290 70 58 chr10 60791758 60792017 -79524748 - MLT1K LTR MaLR -243 345 84 236 342 35 9 chr10 60792250 60792364 -79524401 - L3 LINE CR1 -308 1269 1153 2251 95 3 0 chr10 60792367 60792663 -79524102 - AluY SINE Alu -14 297 1 747 238 79 9 chr10 60792937 60793034 -79523731 + MIR SINE MIR 16 105 -157 2362 109 0 3 chr10 60793034 60793345 -79523420 - AluSx SINE Alu 0 312 3 747 238 79 9 chr10 60793345 60793461 -79523304 + MIR SINE MIR 105 244 -18 353 302 119 0 chr10 60793864 60794023 -79522742 + MER5B DNA MER1_type 1 178 0 221 231 385 0 chr10 60794032 60794136 -79522629 + MER5B DNA MER1_type 1 144 -34 2038 129 0 7 chr10 60794136 60794416 -79522349 + AluSx SINE Alu 1 280 -32 228 35 0 0 chr10 60794416 60794445 -79522320 + (CA)n Simple_repeat Simple_repeat 1 29 0 352 300 90 5 chr10 60795565 60795765 -79521000 - L1MC4 LINE L1 -4 8038 7822 290 192 0 26 chr10 60796427 60796505 -79520260 + (TGG)n Simple_repeat Simple_repeat 1 76 0 2633 82 31 8 chr10 60796918 60797274 -79519491 + THE1B LTR MaLR 1 364 0 2196 113 10 0 chr10 60797289 60797582 -79519183 - AluSx SINE Alu -16 296 1 2084 110 28 0 chr10 60798307 60798597 -79518168 + AluSx SINE Alu 1 298 -14 2951 200 28 0 chr10 60799805 60800346 -79516419 + REP3 LTR ERV 5 560 -2 612 193 222 0 chr10 60800867 60801038 -79515727 + MER3 DNA MER1_type 1 209 0 198 118 0 0 chr10 60801897 60801931 -79514834 + (CACAT)n Simple_repeat Simple_repeat 1 34 0 210 219 0 0 chr10 60802041 60802105 -79514660 + A-rich Low_complexity Low_complexity 1 64 0 225 0 0 0 chr10 60806228 60806253 -79510512 + (T)n Simple_repeat Simple_repeat 1 25 0 435 280 11 46 chr10 60807528 60807703 -79509062 + MIR SINE MIR 45 213 -49 338 278 54 32 chr10 60808339 60808595 -79508170 + MLT1H1 LTR MaLR 25 287 -292 252 170 0 0 chr10 60808606 60808659 -79508106 + GA-rich Low_complexity Low_complexity 2 54 0 284 278 162 34 chr10 60808663 60808897 -79507868 + MLT1H1 LTR MaLR 292 555 0 555 297 108 9 chr10 60810175 60810397 -79506368 - MIR SINE MIR -7 255 12 576 100 118 27 chr10 60810460 60810570 -79506195 + L2 LINE L2 3193 3312 -1 1184 130 0 0 chr10 60810982 60811159 -79505606 - L1PA15 LINE L1 -24 6141 5965 2045 122 31 0 chr10 60811159 60811445 -79505320 - AluSx SINE Alu -16 296 2 2748 100 29 9 chr10 60812161 60812581 -79504184 + MSTA LTR MaLR 1 428 0 2326 93 0 0 chr10 60814373 60814674 -79502091 - AluSx SINE Alu -11 301 1 2567 135 19 9 chr10 60815154 60815576 -79501189 + MSTB LTR MaLR 1 426 0 216 293 152 10 chr10 60815609 60815708 -79501057 + MIR SINE MIR 48 160 -102 225 328 0 0 chr10 60815810 60815874 -79500891 - MIR SINE MIR -3 259 196 1146 135 68 144 chr10 60815883 60816223 -79500542 + MSTB1 LTR MaLR 4 317 -115 693 103 0 9 chr10 60816289 60816396 -79500369 + MSTB1 LTR MaLR 322 427 -5 635 303 41 1 chr10 60816469 60816669 -79500096 + MIR SINE MIR 40 245 -17 963 239 9 18 chr10 60816886 60817112 -79499653 + MER58A DNA MER1_type 1 224 0 358 239 9 64 chr10 60817412 60817521 -79499244 - L1ME3 LINE L1 -90 6072 5970 800 274 57 0 chr10 60817610 60817858 -79498907 + L1ME3A LINE L1 5608 5869 -301 835 270 118 32 chr10 60817862 60818295 -79498470 - L2 LINE L2 -561 2753 2284 255 305 61 0 chr10 60818640 60818722 -79498043 - L2 LINE L2 -14 3299 3213 2167 109 7 3 chr10 60819180 60819473 -79497292 + AluSx SINE Alu 3 296 -16 2117 247 26 7 chr10 60819671 60820217 -79496548 + L1MA4 LINE L1 13 568 -6997 2052 151 43 34 chr10 60820219 60820764 -79496001 + MLT2A2 LTR ERVL 1 554 0 3113 255 35 18 chr10 60820782 60821688 -79495077 + L1MA4 LINE L1 598 2201 -5364 303 314 44 20 chr10 60821704 60821956 -79494809 - AluSq SINE Alu -3 300 43 407 77 0 0 chr10 60822170 60822222 -79494543 + Alu SINE Alu 239 290 -21 243 0 0 0 chr10 60822227 60822254 -79494511 + (CA)n Simple_repeat Simple_repeat 2 28 0 536 155 23 8 chr10 60822297 60822426 -79494339 + (CA)n Simple_repeat Simple_repeat 2 132 0 2379 88 0 7 chr10 60822429 60822735 -79494030 - AluSx SINE Alu -8 304 1 1069 231 0 9 chr10 60822735 60822951 -79493814 - AluJo SINE Alu -14 298 85 8623 190 31 38 chr10 60822951 60823260 -79493505 + L1MA4 LINE L1 2211 2521 -5044 492 48 0 0 chr10 60823260 60823323 -79493442 + (GA)n Simple_repeat Simple_repeat 1 63 0 8623 190 31 38 chr10 60823323 60824076 -79492689 + L1MA4 LINE L1 2521 3277 -4288 2123 148 0 0 chr10 60824076 60824374 -79492391 - AluSx SINE Alu -14 298 1 8623 190 31 38 chr10 60824374 60826714 -79490051 + L1MA4 LINE L1 3277 5769 -1796 4287 131 16 44 chr10 60826715 60827512 -79489253 + L1MA4 LINE L1 6931 7705 -14 567 112 0 0 chr10 60827679 60827768 -79488997 + HY3 scRNA scRNA 13 101 0 205 206 16 16 chr10 60828542 60828605 -79488160 + CT-rich Low_complexity Low_complexity 3 65 0 266 282 14 0 chr10 60829043 60829114 -79487651 + GA-rich Low_complexity Low_complexity 3 74 0 34 65 0 0 chr10 60829134 60829196 -79487569 + AT_rich Low_complexity Low_complexity 1 62 0 888 322 130 54 chr10 60829639 60830309 -79486456 + L3 LINE CR1 851 1571 -6 21 0 0 0 chr10 60832829 60832850 -79483915 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 60833122 60833146 -79483619 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3442 137 92 157 chr10 60833370 60833505 -79483260 - L1MC3 LINE L1 -1 7784 7642 2152 109 0 0 chr10 60833505 60833790 -79482975 - AluSx SINE Alu -27 285 1 3442 137 92 157 chr10 60833790 60834016 -79482749 - L1MC3 LINE L1 -143 7642 7403 5314 83 16 7 chr10 60834016 60834748 -79482017 - L1PA10 LINE L1 -13 6155 5417 3442 137 92 157 chr10 60834748 60835038 -79481727 - L1MC3 LINE L1 -382 7403 7095 275 270 0 0 chr10 60835038 60835112 -79481653 - MLT1F1 LTR MaLR -442 125 52 3442 137 92 157 chr10 60835112 60835555 -79481210 - L1MC3 LINE L1 -690 7095 6692 22 0 0 0 chr10 60838654 60838676 -79478089 + AT_rich Low_complexity Low_complexity 1 22 0 195 129 0 0 chr10 60839326 60839357 -79477408 + (TG)n Simple_repeat Simple_repeat 2 32 0 26 30 0 0 chr10 60840071 60840104 -79476661 + AT_rich Low_complexity Low_complexity 1 33 0 1822 133 65 0 chr10 60840205 60840484 -79476281 - AluJb SINE Alu -15 297 1 332 244 41 77 chr10 60840505 60840714 -79476051 + L2 LINE L2 2729 2921 -351 721 261 72 5 chr10 60841200 60841407 -79475358 + MIR SINE MIR 13 233 -29 275 196 0 0 chr10 60841426 60841472 -79475293 + MIR SINE MIR 207 252 -10 1545 144 20 106 chr10 60841515 60841863 -79474902 + AluYb8 SINE Alu 1 318 0 2118 127 13 3 chr10 60841944 60842251 -79474514 + AluSq SINE Alu 1 310 -3 789 313 151 45 chr10 60842293 60843058 -79473707 + L2 LINE L2 1633 2544 -770 2102 67 0 11 chr10 60843058 60843327 -79473438 - AluY SINE Alu -8 303 38 789 313 151 45 chr10 60843327 60843631 -79473134 + L2 LINE L2 2544 2815 -499 855 234 36 9 chr10 60843771 60843993 -79472772 + MIR SINE MIR 32 259 -3 199 362 0 0 chr10 60844030 60844077 -79472688 + L2 LINE L2 3140 3186 -86 27 0 0 0 chr10 60844493 60844520 -79472245 + AT_rich Low_complexity Low_complexity 1 27 0 1903 149 49 0 chr10 60844877 60845165 -79471600 + AluSx SINE Alu 1 302 -10 2430 87 0 7 chr10 60845867 60846177 -79470588 + AluSc SINE Alu 1 308 -1 1494 160 40 20 chr10 60847122 60847372 -79469393 + AluSx SINE Alu 39 293 -19 316 308 71 38 chr10 60847426 60847637 -79469128 - L1MC5 LINE L1 -48 7913 7696 197 360 79 0 chr10 60848804 60848893 -79467872 + L2 LINE L2 3125 3220 -52 28 29 0 0 chr10 60848966 60849001 -79467764 + AT_rich Low_complexity Low_complexity 1 35 0 2353 94 3 0 chr10 60849128 60849425 -79467340 + AluSp SINE Alu 1 298 -15 22 0 0 0 chr10 60850694 60850716 -79466049 + AT_rich Low_complexity Low_complexity 1 22 0 372 301 72 0 chr10 60850909 60851062 -79465703 - MIR SINE MIR -49 213 50 758 234 0 18 chr10 60851899 60852066 -79464699 - FRAM SINE Alu -2 164 1 2351 53 3 0 chr10 60852680 60853006 -79463759 - AluY SINE Alu 0 327 1 743 183 0 0 chr10 60854763 60854883 -79461882 + FLAM_A SINE Alu 1 120 -13 287 115 33 0 chr10 60854890 60854951 -79461814 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 180 0 0 0 chr10 60855971 60855991 -79460774 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3398 170 19 20 chr10 60856224 60857434 -79459331 + L1PB4 LINE L1 4579 5780 -376 2063 100 52 0 chr10 60857453 60857743 -79459022 - AluSg SINE Alu -5 305 1 236 125 0 0 chr10 60857743 60857783 -79458982 - L1P5 LINE L1 -322 5829 5790 194 170 0 21 chr10 60857854 60857901 -79458864 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 221 296 25 0 chr10 60857966 60858047 -79458718 + (CATA)n Simple_repeat Simple_repeat 3 85 0 2088 135 29 0 chr10 60858047 60858388 -79458377 + L1PB4 LINE L1 5789 6139 -17 1891 136 8 0 chr10 60858927 60859191 -79457574 + AluSx SINE Alu 2 267 -45 354 54 48 77 chr10 60859484 60859652 -79457113 + (TA)n Simple_repeat Simple_repeat 2 164 0 380 175 19 39 chr10 60859657 60859760 -79457005 + (TATAA)n Simple_repeat Simple_repeat 5 105 0 544 46 0 92 chr10 60859761 60859914 -79456851 + (TA)n Simple_repeat Simple_repeat 2 140 0 328 144 36 36 chr10 60859933 60860072 -79456693 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 1164 270 97 63 chr10 60860091 60861271 -79455494 - L1MEc LINE L1 -4388 2008 789 2262 101 10 0 chr10 60861564 60861860 -79454905 + AluSg SINE Alu 1 299 -11 247 109 0 43 chr10 60862226 60862272 -79454493 + MADE1 DNA Mariner 1 44 -36 21 104 0 0 chr10 60862463 60862540 -79454225 + AT_rich Low_complexity Low_complexity 1 77 0 238 294 0 0 chr10 60863100 60863151 -79453614 - L2 LINE L2 -8 3264 3214 2471 62 3 13 chr10 60863918 60864223 -79452542 + AluY SINE Alu 1 302 -9 217 260 115 39 chr10 60866162 60866266 -79450499 + L2 LINE L2 3202 3313 0 386 284 154 15 chr10 60866565 60866766 -79449999 - MIR SINE MIR -25 237 9 26 0 0 0 chr10 60866820 60866846 -79449919 + AT_rich Low_complexity Low_complexity 1 26 0 1427 205 49 17 chr10 60866850 60867138 -79449627 - AluJo SINE Alu -15 297 1 3375 141 55 7 chr10 60867146 60867762 -79449003 - L1MB2 LINE L1 -2 6169 5524 1919 171 29 24 chr10 60868273 60868694 -79448071 - L1MB3 LINE L1 -58 6125 5703 2291 66 10 17 chr10 60869094 60869395 -79447370 + AluY SINE Alu 1 299 -12 207 214 11 45 chr10 60870617 60870706 -79446059 + A-rich Low_complexity Low_complexity 5 90 0 2113 95 0 11 chr10 60871715 60871998 -79444767 - AluSg SINE Alu -30 280 1 24 32 0 0 chr10 60872163 60872194 -79444571 + AT_rich Low_complexity Low_complexity 1 31 0 1765 183 3 10 chr10 60872200 60872506 -79444259 + AluJo SINE Alu 1 304 -8 210 287 126 79 chr10 60874349 60874777 -79441988 - L2 LINE L2 -7 3265 2818 1050 236 28 0 chr10 60874991 60875203 -79441562 - MER20 DNA MER1_type 0 219 2 2349 95 0 0 chr10 60875896 60876190 -79440575 + AluSq SINE Alu 1 294 -19 695 182 8 23 chr10 60878221 60878353 -79438412 - FLAM_C SINE Alu -4 139 10 185 337 109 22 chr10 60879172 60879264 -79437501 + L2 LINE L2 3158 3257 -15 552 295 153 33 chr10 60879812 60880242 -79436523 - L2 LINE L2 -6 3307 2826 302 302 94 0 chr10 60880283 60880389 -79436376 + HAL1 LINE L1 1 116 -2391 399 289 67 36 chr10 60880494 60880553 -79436212 + HAL1 LINE L1 178 234 -2273 821 239 29 5 chr10 60880553 60880758 -79436007 + MER63A DNA MER1_type 1 210 0 399 289 67 36 chr10 60880758 60881027 -79435738 + HAL1 LINE L1 234 516 -1991 915 252 64 13 chr10 60881084 60881318 -79435447 + MIR SINE MIR 17 262 0 291 242 134 64 chr10 60881561 60881875 -79434890 + HAL1 LINE L1 853 1188 -1319 461 288 56 20 chr10 60881946 60882144 -79434621 - L2 LINE L2 -556 2758 2554 1647 195 158 33 chr10 60883367 60884070 -79432695 - Charlie2 DNA MER1_type -73 2789 1999 6410 97 8 1 chr10 60884119 60886612 -79430153 - L1PA7 LINE L1 -28 6103 3514 28 29 0 0 chr10 60887882 60887917 -79428848 + AT_rich Low_complexity Low_complexity 1 35 0 986 107 13 0 chr10 60888666 60888825 -79427940 + L1P4 LINE L1 5351 5511 -655 851 170 0 15 chr10 60889919 60890054 -79426711 - FLAM_A SINE Alu 0 133 1 352 261 43 36 chr10 60890175 60890313 -79426452 - MIR SINE MIR -1 261 123 984 249 53 60 chr10 60890385 60890967 -79425798 - L1MC5 LINE L1 -48 7913 7336 1169 172 18 31 chr10 60891158 60891385 -79425380 - MER58A DNA MER1_type 0 224 1 21 0 0 0 chr10 60891954 60891975 -79424790 + AT_rich Low_complexity Low_complexity 1 21 0 740 22 0 0 chr10 60891975 60892064 -79424701 - L1PA3 LINE L1 -3 6152 6064 448 264 82 31 chr10 60892175 60892334 -79424431 - MIR SINE MIR -71 191 25 336 241 11 0 chr10 60892671 60892758 -79424007 + L1ME LINE L1 5517 5604 -517 1225 251 120 17 chr10 60892764 60893247 -79423518 + L1MCc LINE L1 784 1316 -5107 329 270 95 61 chr10 60893364 60893660 -79423105 + L1MCc LINE L1 1597 1902 -5039 182 114 0 29 chr10 60894159 60894194 -79422571 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 1694 213 50 26 chr10 60894299 60894754 -79422011 - MER31B LTR ERV1 0 466 1 221 386 0 23 chr10 60896038 60896126 -79420639 + MIR SINE MIR 57 142 -66 431 206 31 77 chr10 60896158 60896352 -79420413 + L1MC5 LINE L1 7740 7924 -37 2269 109 3 6 chr10 60896376 60896689 -79420076 + AluSq SINE Alu 1 312 -1 2882 134 50 19 chr10 60896875 60897469 -79419296 - MER4B LTR ERV1 -2 777 1 256 213 160 60 chr10 60898176 60898326 -79418439 + Charlie2 DNA MER1_type 159 323 -2459 278 244 35 0 chr10 60898364 60898450 -79418315 + Charlie2 DNA MER1_type 1922 2010 -852 8157 173 16 33 chr10 60898465 60900243 -79416522 + L1P LINE L1 1147 2895 -3251 182 339 27 27 chr10 60901381 60901493 -79415272 + MIR SINE MIR 86 197 -65 314 237 10 62 chr10 60901517 60901614 -79415151 - MIR SINE MIR -50 212 121 614 237 105 7 chr10 60901844 60901996 -79414769 + MIR SINE MIR 2 168 -94 1122 150 146 42 chr10 60902003 60902361 -79414404 + MSTC LTR MaLR 1 428 0 295 232 32 53 chr10 60902364 60902459 -79414306 + MIR SINE MIR 170 262 0 2664 33 0 0 chr10 60903646 60903950 -79412815 + AluY SINE Alu 1 304 -7 1506 193 39 14 chr10 60904092 60904449 -79412316 - L1MB7 LINE L1 -8 6176 5811 2106 147 0 0 chr10 60904731 60905043 -79411722 + AluSx SINE Alu 1 312 0 2214 109 0 7 chr10 60905772 60906074 -79410691 - AluY SINE Alu -11 300 1 3193 167 42 30 chr10 60906117 60906411 -79410354 - L1MB2 LINE L1 -3 6168 5879 2007 137 3 26 chr10 60906411 60906724 -79410041 - AluSx SINE Alu -6 306 1 3193 167 42 30 chr10 60906724 60907137 -79409628 - L1MB2 LINE L1 -292 5879 5452 543 299 123 0 chr10 60907364 60907575 -79409190 - MIR SINE MIR -6 256 20 321 262 0 37 chr10 60908942 60909068 -79407697 + MER5A DNA MER1_type 1 133 -56 2425 78 0 3 chr10 60909117 60909423 -79407342 - AluY SINE Alu -6 305 1 259 272 224 7 chr10 60909766 60909913 -79406852 + MIR SINE MIR 58 236 -26 390 211 122 16 chr10 60910201 60910324 -79406441 - MER20B DNA MER1_type -605 178 43 446 287 101 42 chr10 60911668 60911905 -79404860 - MIR SINE MIR -7 255 5 238 323 128 15 chr10 60912005 60912138 -79404627 - MIR3 SINE MIR -59 149 2 1015 214 95 22 chr10 60912753 60913070 -79403695 + MER2 DNA MER2_type 1 340 -4 353 306 25 33 chr10 60913652 60913773 -79402992 - L2 LINE L2 0 3272 3153 21 71 0 0 chr10 60913888 60913930 -79402835 + AT_rich Low_complexity Low_complexity 1 42 0 185 206 16 48 chr10 60914125 60914188 -79402577 + MIR SINE MIR 180 240 -22 374 202 79 0 chr10 60914454 60914543 -79402222 + MER3 DNA MER1_type 9 104 -105 23 0 0 0 chr10 60914551 60914574 -79402191 + AT_rich Low_complexity Low_complexity 1 23 0 3666 136 53 5 chr10 60915253 60915855 -79400910 - L1PA16 LINE L1 -11 6155 5525 391 264 141 18 chr10 60918921 60919084 -79397681 + MIR SINE MIR 8 190 -72 2709 150 5 2 chr10 60919281 60919708 -79397057 + MSTA LTR MaLR 1 428 0 270 246 220 21 chr10 60919733 60919958 -79396807 - MIR SINE MIR -27 235 2 1905 146 37 0 chr10 60923122 60923417 -79393348 + AluSx SINE Alu 1 306 -6 1063 169 101 62 chr10 60923741 60924079 -79392686 - L1MA7 LINE L1 0 6291 5941 231 368 0 0 chr10 60925623 60925691 -79391074 + L2 LINE L2 3204 3271 -1 790 234 23 0 chr10 60926759 60926930 -79389835 - FAM SINE Alu 0 175 1 22 35 0 0 chr10 60927042 60927071 -79389694 + AT_rich Low_complexity Low_complexity 1 29 0 259 305 99 34 chr10 60927376 60927719 -79389046 - L1ME LINE L1 -422 5699 5328 2074 110 0 4 chr10 60928122 60928403 -79388362 + AluSg SINE Alu 1 280 -30 200 323 16 0 chr10 60929288 60929350 -79387415 - L2 LINE L2 0 3313 3251 1472 176 3 85 chr10 60929842 60930172 -79386593 - AluJo SINE Alu -9 303 1 324 0 0 0 chr10 60930756 60930792 -79385973 + (TG)n Simple_repeat Simple_repeat 1 36 0 228 35 0 0 chr10 60931120 60931149 -79385616 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2077 125 0 3 chr10 60931151 60931440 -79385325 - AluSc SINE Alu -17 292 5 1271 178 58 7 chr10 60931989 60932264 -79384501 - L1MB7 LINE L1 0 6184 5896 2445 121 22 0 chr10 60932305 60932660 -79384105 + THE1B LTR MaLR 1 363 -1 1440 201 22 11 chr10 60932660 60932938 -79383827 - AluJo SINE Alu -31 281 1 1701 129 20 4 chr10 60937048 60937303 -79379462 - AluSx SINE Alu -19 293 35 1831 133 18 0 chr10 60938733 60939012 -79377753 - AluJo SINE Alu -15 297 14 194 281 73 12 chr10 60939455 60939537 -79377228 + L2 LINE L2 3005 3091 -181 985 183 67 24 chr10 60939907 60940115 -79376650 - MER20 DNA MER1_type -2 217 1 275 265 12 24 chr10 60940235 60940318 -79376447 + L2 LINE L2 3191 3272 0 291 303 0 13 chr10 60941661 60941737 -79375028 - L2 LINE L2 -14 3299 3225 775 244 98 27 chr10 60942537 60942617 -79374148 - MIR SINE MIR -15 247 174 1547 221 103 7 chr10 60942617 60943043 -79373722 + MLT1C LTR MaLR 1 467 0 775 244 98 27 chr10 60943043 60943187 -79373578 - MIR SINE MIR -88 174 7 233 250 18 0 chr10 60943236 60943292 -79373473 + (TTCA)n Simple_repeat Simple_repeat 3 59 0 458 265 148 30 chr10 60943727 60943957 -79372808 + MIR SINE MIR 2 258 -4 200 279 132 58 chr10 60944056 60944246 -79372519 + L2 LINE L2 1858 2061 -1253 726 294 65 31 chr10 60944982 60945366 -79371399 - L1ME3A LINE L1 -231 5939 5543 790 308 35 62 chr10 60945371 60945825 -79370940 - L1MEd LINE L1 -5410 709 268 393 259 50 124 chr10 60946165 60946424 -79370341 - MIR SINE MIR -3 259 20 342 0 0 0 chr10 60947557 60947595 -79369170 + (CA)n Simple_repeat Simple_repeat 2 39 0 476 113 0 25 chr10 60947932 60948012 -79368753 - FLAM_C SINE Alu -8 135 58 241 240 20 0 chr10 60948032 60948082 -79368683 + polypyrimidine Low_complexity Low_complexity 5 55 0 1630 150 84 4 chr10 60948083 60948357 -79368408 - AluJb SINE Alu -16 296 1 1300 199 76 21 chr10 60950389 60950680 -79366085 - AluJb SINE Alu -5 307 1 2205 106 10 3 chr10 60951373 60951676 -79365089 - AluSx SINE Alu -7 305 1 280 310 181 0 chr10 60952150 60952270 -79364495 - MIR SINE MIR -71 137 14 21 0 0 0 chr10 60953341 60953362 -79363403 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 60953386 60953409 -79363356 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 852 298 16 4 chr10 60953855 60954103 -79362662 + MIR SINE MIR 2 252 -10 1165 148 41 41 chr10 60954295 60954585 -79362180 - Charlie1 DNA MER1_type 0 2761 2472 31 0 0 0 chr10 60955163 60955194 -79361571 + AT_rich Low_complexity Low_complexity 1 31 0 188 311 216 0 chr10 60955278 60955352 -79361413 - L2 LINE L2 -10 3262 3173 1748 165 36 20 chr10 60955370 60955673 -79361092 + AluJo SINE Alu 1 308 -4 368 200 0 32 chr10 60959793 60959918 -79356847 + (TATATG)n Simple_repeat Simple_repeat 5 125 0 * 717 218 0 0 chr10 60959911 60960076 -79356689 + (CA)n Simple_repeat Simple_repeat 2 166 0 2127 122 3 13 chr10 60960083 60960386 -79356379 - AluSx SINE Alu -12 300 1 510 216 13 138 chr10 60960664 60960896 -79355869 - L2 LINE L2 -4 3309 3107 378 197 0 0 chr10 60960997 60961073 -79355692 - MER116 DNA Mariner 0 80 5 400 264 174 6 chr10 60961114 60961281 -79355484 - MIR SINE MIR -1 261 67 3773 174 28 43 chr10 60961391 60962537 -79354228 + L1MA9 LINE L1 4680 5800 -512 315 71 0 0 chr10 60962537 60962579 -79354186 + (TG)n Simple_repeat Simple_repeat 2 43 0 3773 174 28 43 chr10 60962579 60962836 -79353929 + L1MA9 LINE L1 5800 6059 -253 411 309 79 34 chr10 60963459 60963876 -79352889 - L1M4 LINE L1 -858 5288 4853 244 280 7 53 chr10 60964338 60964488 -79352277 + L1ME LINE L1 5636 5778 -343 793 234 35 0 chr10 60965895 60966066 -79350699 + MER5A DNA MER1_type 1 177 -12 245 228 38 13 chr10 60966315 60966394 -79350371 - HAL1b LINE L1 -464 884 804 502 240 96 0 chr10 60966867 60967013 -79349752 + MER103 DNA DNA 6 165 -1 186 268 73 89 chr10 60967664 60967787 -79348978 + L2 LINE L2 3183 3303 -10 211 394 35 28 chr10 60968096 60968238 -79348527 - L2 LINE L2 -3 3269 3127 736 319 28 12 chr10 60968804 60969055 -79347710 + MIR SINE MIR 2 256 -6 2000 155 0 3 chr10 60969135 60969445 -79347320 + AluSx SINE Alu 1 309 -3 563 224 0 0 chr10 60969469 60969567 -79347198 + FRAM SINE Alu 21 118 -58 536 157 0 11 chr10 60969605 60969694 -79347071 - MER5A DNA MER1_type 0 189 102 279 191 0 0 chr10 60969707 60969754 -79347011 + Alu SINE Alu 245 291 -10 187 179 45 90 chr10 60969759 60969826 -79346939 + MIR SINE MIR 151 214 -48 279 323 165 13 chr10 60969827 60969985 -79346780 + MER91B DNA MER1_type 1 182 -8 1016 134 0 13 chr10 60971383 60971540 -79345225 + MER5A DNA MER1_type 13 167 -22 240 260 90 40 chr10 60972073 60972173 -79344592 + L2 LINE L2 3205 3309 -4 312 27 0 0 chr10 60973245 60973282 -79343483 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 579 251 36 24 chr10 60973903 60974070 -79342695 + MIR SINE MIR 28 196 -66 5456 55 6 0 chr10 60976006 60976694 -79340071 + L1PA7 LINE L1 5461 6152 -2 21 0 0 0 chr10 60976969 60976990 -79339775 + AT_rich Low_complexity Low_complexity 1 21 0 2238 70 18 0 chr10 60977439 60977723 -79339042 + AluY SINE Alu 3 291 -20 207 340 96 19 chr10 60978445 60978601 -79338164 - MER5B DNA MER1_type -10 168 1 461 254 113 59 chr10 60979035 60979206 -79337559 + L1ME4a LINE L1 5651 5811 -310 14205 87 20 1 chr10 60979206 60981972 -79334793 + L1PA7 LINE L1 3359 6150 -4 461 254 113 59 chr10 60981972 60982155 -79334610 + L1ME4a LINE L1 5811 6024 -97 21 0 0 0 chr10 60982264 60982285 -79334480 + AT_rich Low_complexity Low_complexity 1 21 0 496 310 49 0 chr10 60982687 60982829 -79333936 - L3b LINE CR1 -157 1426 1278 1773 103 95 0 chr10 60983919 60984171 -79332594 - AluSx SINE Alu -36 276 1 2026 161 3 0 chr10 60985511 60985815 -79330950 - AluJo SINE Alu -2 310 6 189 0 0 0 chr10 60987070 60987091 -79329674 + (A)n Simple_repeat Simple_repeat 1 21 0 884 291 110 31 chr10 60987196 60987643 -79329122 + L2 LINE L2 2829 3310 -3 249 254 0 0 chr10 60987935 60987990 -79328775 + L2 LINE L2 3211 3265 -7 271 282 136 0 chr10 60988153 60988263 -79328502 - MIR3 SINE MIR -9 199 75 437 300 37 16 chr10 60988315 60988505 -79328260 + Charlie8 DNA MER1_type 88 281 -2136 219 297 37 106 chr10 60989413 60989659 -79327106 + L2 LINE L2 3020 3248 -65 254 294 83 18 chr10 60989836 60989945 -79326820 - MIR SINE MIR -13 249 134 278 191 34 56 chr10 60990359 60990448 -79326317 - Charlie8 DNA MER1_type -2260 157 71 483 272 38 96 chr10 60991945 60992206 -79324559 + MIR SINE MIR 17 262 0 2616 55 3 0 chr10 60992331 60992641 -79324124 - AluY SINE Alu 0 311 1 1454 192 65 0 chr10 60992758 60993019 -79323746 - AluSx SINE Alu -34 278 1 227 340 0 0 chr10 60993041 60993141 -79323624 + L2 LINE L2 3081 3180 -133 239 275 38 25 chr10 60993154 60993234 -79323531 - MIR SINE MIR -58 204 124 2119 61 0 11 chr10 60993306 60993570 -79323195 - AluY SINE Alu -9 302 42 806 52 0 0 chr10 60993703 60993799 -79322966 - L1PA10 LINE L1 -15 6153 6058 1959 83 0 15 chr10 60994067 60994333 -79322432 - AluY SINE Alu -8 303 42 1072 80 0 0 chr10 60994466 60994604 -79322161 - L1PA10 LINE L1 -15 6153 6016 324 254 69 84 chr10 60995571 60995762 -79321003 - MIR SINE MIR -45 217 24 268 321 0 12 chr10 60995944 60996025 -79320740 - L2 LINE L2 0 3313 3234 2023 141 0 16 chr10 60996710 60997014 -79319751 + AluSx SINE Alu 1 299 -13 1230 164 26 13 chr10 60997507 60997738 -79319027 + AluJb SINE Alu 1 234 -78 521 86 0 12 chr10 60997755 60997836 -79318929 + (GAAAA)n Simple_repeat Simple_repeat 2 81 0 780 289 21 13 chr10 60997929 60998168 -79318597 - MIR SINE MIR -12 250 10 21 0 0 0 chr10 60998480 60998501 -79318264 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr10 60998857 60998891 -79317874 + AT_rich Low_complexity Low_complexity 1 34 0 276 277 117 80 chr10 60999029 60999217 -79317548 - L2 LINE L2 -10 3303 3109 * 604 234 214 10 chr10 60999212 60999413 -79317352 - L2 LINE L2 -760 2554 2313 1193 285 37 35 chr10 60999415 60999847 -79316918 - LTR16C LTR ERVL -8 483 51 1883 294 111 26 chr10 60999894 61000703 -79316062 - L2 LINE L2 -994 2320 1443 250 282 35 103 chr10 61000910 61001084 -79315681 - L3 LINE CR1 -24 1553 1392 402 252 76 17 chr10 61001175 61001294 -79315471 + L2 LINE L2 3187 3312 -1 4513 81 16 0 chr10 61002058 61002686 -79314079 + L1PA13 LINE L1 5522 6159 -4 205 260 164 0 chr10 61002837 61002910 -79313855 + MIR SINE MIR 166 250 -12 525 224 286 0 chr10 61003015 61003162 -79313603 - MER5A DNA MER1_type 0 189 1 270 73 0 0 chr10 61003623 61003664 -79313101 + (A)n Simple_repeat Simple_repeat 1 41 0 396 333 14 14 chr10 61003715 61003856 -79312909 + MIR SINE MIR 1 141 -121 852 159 0 0 chr10 61004513 61004639 -79312126 + AluSg/x SINE Alu 172 297 -15 266 257 0 0 chr10 61004699 61004769 -79311996 + Charlie8 DNA MER1_type 66 135 -2282 442 292 123 47 chr10 61005389 61005625 -79311140 - L3b LINE CR1 -148 1435 1182 4138 98 21 7 chr10 61006039 61006410 -79310355 - L1PB2 LINE L1 0 6151 5766 237 33 0 0 chr10 61006410 61006440 -79310325 + (TA)n Simple_repeat Simple_repeat 2 31 0 4138 98 21 7 chr10 61006440 61006688 -79310077 - L1PB2 LINE L1 -385 5766 5523 246 289 133 0 chr10 61006689 61006779 -79309986 - MIR SINE MIR -57 151 50 927 185 76 5 chr10 61006826 61007010 -79309755 - AluJo SINE Alu -115 197 1 1214 155 56 4 chr10 61007012 61007263 -79309502 + MER58B DNA MER1_type 78 341 0 1724 195 0 23 chr10 61007313 61007621 -79309144 - AluJo SINE Alu -11 301 1 219 103 0 0 chr10 61008489 61008528 -79308237 + (A)n Simple_repeat Simple_repeat 1 39 0 459 319 41 12 chr10 61008579 61008748 -79308017 + MIR SINE MIR 1 174 -88 254 271 131 47 chr10 61010188 61010295 -79306470 - L2 LINE L2 -19 3294 3179 1618 169 9 31 chr10 61012151 61012470 -79304295 + AluSx SINE Alu 1 312 0 1699 154 10 39 chr10 61013117 61013428 -79303337 - AluJb SINE Alu -8 304 3 363 229 37 9 chr10 61015211 61015320 -79301445 + L1ME4a LINE L1 5959 6070 -51 2040 147 0 0 chr10 61016847 61017147 -79299618 - AluSx SINE Alu -12 300 1 1908 316 117 38 chr10 61017190 61018239 -79298526 + L2 LINE L2 596 1819 -1495 336 24 0 0 chr10 61018239 61018280 -79298485 + (CA)n Simple_repeat Simple_repeat 1 41 0 1908 316 117 38 chr10 61018280 61018849 -79297916 + L2 LINE L2 1819 2342 -972 975 326 43 30 chr10 61018843 61019309 -79297456 + L2 LINE L2 2831 3302 -11 * 843 162 34 14 chr10 61019792 61019940 -79296825 + FRAM SINE Alu 1 151 -25 1682 171 43 0 chr10 61020563 61020843 -79295922 + AluJo SINE Alu 1 292 -20 226 273 0 0 chr10 61022380 61022446 -79294319 - L1ME LINE L1 -422 5699 5634 181 290 81 0 chr10 61022875 61022937 -79293828 - L2 LINE L2 0 3272 3206 199 305 124 29 chr10 61022978 61023083 -79293682 - L2 LINE L2 -171 3101 2987 28 29 0 0 chr10 61023207 61023242 -79293523 + GC_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 61024107 61024131 -79292634 + (T)n Simple_repeat Simple_repeat 1 24 0 2272 109 0 0 chr10 61024148 61024450 -79292315 + AluSx SINE Alu 1 302 -10 2252 59 11 0 chr10 61024548 61024835 -79291930 + L1PA7 LINE L1 5861 6150 -4 186 299 159 0 chr10 61025153 61025260 -79291505 + L2 LINE L2 3189 3312 -1 557 279 40 58 chr10 61025789 61026015 -79290750 - MIR SINE MIR -40 222 1 2000 125 20 14 chr10 61026189 61026485 -79290280 + AluSx SINE Alu 1 298 -14 183 184 0 0 chr10 61026771 61026809 -79289956 + GA-rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 61028367 61028389 -79288376 + (CA)n Simple_repeat Simple_repeat 2 23 0 667 237 14 24 chr10 61029030 61029241 -79287524 + L1ME2 LINE L1 5956 6164 0 28 29 0 0 chr10 61030573 61030608 -79286157 + AT_rich Low_complexity Low_complexity 1 35 0 986 107 13 0 chr10 61031359 61031518 -79285247 + L1P4 LINE L1 5351 5511 -655 607 319 51 11 chr10 61032540 61032876 -79283889 + L3 LINE CR1 1171 1575 -2 341 211 26 0 chr10 61033929 61034005 -79282760 - MER81 DNA DNA -36 78 1 216 0 0 0 chr10 61034779 61034803 -79281962 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 407 292 43 64 chr10 61034868 61035137 -79281628 + L1ME4a LINE L1 5692 5927 -194 415 308 142 28 chr10 61036078 61036289 -79280476 - MIR SINE MIR -6 256 22 301 314 103 26 chr10 61037848 61038004 -79278761 + MIR SINE MIR 6 173 -89 6019 129 34 21 chr10 61038545 61040132 -79276633 + L1MA5A LINE L1 4695 6295 -2 22 35 0 0 chr10 61040204 61040233 -79276532 + AT_rich Low_complexity Low_complexity 1 29 0 531 335 71 13 chr10 61040540 61040764 -79276001 + MIR SINE MIR 13 249 -13 361 330 103 5 chr10 61041861 61042046 -79274719 - MIR SINE MIR -50 212 10 261 0 0 0 chr10 61042934 61042963 -79273802 + (TA)n Simple_repeat Simple_repeat 2 30 0 25 65 0 0 chr10 61043065 61043111 -79273654 + AT_rich Low_complexity Low_complexity 1 46 0 921 253 71 9 chr10 61043422 61043647 -79273118 - MIR SINE MIR -22 240 2 279 354 12 0 chr10 61043704 61043786 -79272979 - L2 LINE L2 -88 3184 3102 467 348 64 16 chr10 61044111 61044361 -79272404 + MIR SINE MIR 1 262 0 819 286 8 39 chr10 61044632 61044887 -79271878 + MIR SINE MIR 4 250 -12 547 335 76 24 chr10 61044921 61045342 -79271423 + L2 LINE L2 2424 2866 -448 288 338 0 0 chr10 61045629 61045703 -79271062 + L2 LINE L2 3240 3313 0 2293 101 0 0 chr10 61047008 61047304 -79269461 + AluSq SINE Alu 1 296 -17 336 24 0 0 chr10 61050861 61050902 -79265863 + (CA)n Simple_repeat Simple_repeat 2 42 0 2102 82 0 0 chr10 61052779 61053035 -79263730 + AluSx SINE Alu 2 257 -55 23 0 0 0 chr10 61053261 61053284 -79263481 + AT_rich Low_complexity Low_complexity 1 23 0 217 268 155 10 chr10 61054660 61054757 -79262008 + MIR3 SINE MIR 97 207 -1 505 172 43 17 chr10 61054837 61054953 -79261812 + MER3 DNA MER1_type 46 164 -45 * 1289 185 86 6 chr10 61054951 61055313 -79261452 + MER3 DNA MER1_type 2233 2623 0 779 78 17 0 chr10 61055436 61055551 -79261214 + (TTTC)n Simple_repeat Simple_repeat 2 118 0 251 302 129 0 chr10 61055635 61055751 -79261014 - L2 LINE L2 -40 3232 3102 381 247 54 65 chr10 61055950 61056136 -79260629 - L2 LINE L2 -48 3265 3082 253 321 48 12 chr10 61056667 61056751 -79260014 + MIR SINE MIR 62 148 -60 1251 203 70 6 chr10 61057891 61058207 -79258558 - MER58B DNA MER1_type 0 341 6 181 272 0 29 chr10 61058302 61058405 -79258360 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 211 162 0 0 chr10 61058530 61058567 -79258198 - L2 LINE L2 0 3313 3277 405 0 0 0 chr10 61059895 61059940 -79256825 + (TG)n Simple_repeat Simple_repeat 1 45 0 1447 76 5 10 chr10 61060607 61060804 -79255961 - L1PA10 LINE L1 0 6168 5973 1567 162 7 23 chr10 61061006 61061315 -79255450 + L1MB1 LINE L1 5864 6167 -1 396 250 71 44 chr10 61061400 61061710 -79255055 - L1ME4a LINE L1 -98 6023 5704 21 71 0 0 chr10 61062168 61062210 -79254555 + AT_rich Low_complexity Low_complexity 1 42 0 1048 256 90 42 chr10 61062439 61062872 -79253893 + MLT1H LTR MaLR 95 548 -1 890 249 50 56 chr10 61062887 61063388 -79253377 + L1M4 LINE L1 3271 3768 -2378 805 93 0 47 chr10 61063479 61063608 -79253157 - AluY SINE Alu -2 309 187 2265 238 48 17 chr10 61063617 61064391 -79252374 + L1M4 LINE L1 4095 4892 -1254 987 211 43 0 chr10 61064718 61064927 -79251838 - MER58A DNA MER1_type -5 219 2 1877 156 32 41 chr10 61064931 61065271 -79251494 - MER1B DNA MER1_type 0 337 1 248 381 0 0 chr10 61065347 61065452 -79251313 + MIR SINE MIR 158 262 0 324 230 120 84 chr10 61066132 61066182 -79250583 - MIR SINE MIR 0 262 215 216 67 0 0 chr10 61066182 61066212 -79250553 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 324 230 120 84 chr10 61066212 61066352 -79250413 - MIR SINE MIR -47 215 65 1935 151 88 44 chr10 61066814 61067224 -79249541 + MSTA LTR MaLR 1 428 0 395 308 179 13 chr10 61068182 61068494 -79248271 + L2 LINE L2 2065 2428 -886 935 119 0 53 chr10 61068751 61068902 -79247863 + FLAM_C SINE Alu 1 143 0 316 258 39 45 chr10 61068923 61069078 -79247687 + L2 LINE L2 3159 3312 -1 829 221 94 65 chr10 61069185 61069276 -79247489 + MLT1J2 LTR MaLR 95 182 -268 1770 166 3 26 chr10 61069276 61069578 -79247187 - AluJo SINE Alu -17 295 1 829 221 94 65 chr10 61069578 61069826 -79246939 + MLT1J2 LTR MaLR 182 444 -6 593 316 28 18 chr10 61070253 61070466 -79246299 + MIR SINE MIR 5 220 -42 1898 187 111 23 chr10 61070752 61071222 -79245543 + MLT2B1 LTR ERVL 8 518 -2 238 333 54 0 chr10 61071290 61071383 -79245382 + L2 LINE L2 3201 3298 -15 276 346 102 0 chr10 61071439 61071566 -79245199 + L2 LINE L2 3160 3299 -14 1891 164 0 10 chr10 61072323 61072622 -79244143 + AluJb SINE Alu 5 300 -12 282 181 57 0 chr10 61073560 61073665 -79243100 + (TA)n Simple_repeat Simple_repeat 1 111 0 1346 188 0 5 chr10 61074370 61074628 -79242137 + AluJb SINE Alu 64 320 0 195 316 44 66 chr10 61074967 61075103 -79241662 + L3 LINE CR1 588 720 -857 234 284 128 10 chr10 61077014 61077116 -79239649 + MIR3 SINE MIR 90 203 -5 675 157 214 5 chr10 61078381 61078591 -79238174 - MER33 DNA MER1_type -12 312 59 1780 155 14 14 chr10 61079082 61079372 -79237393 + AluJo SINE Alu 1 290 -22 602 233 80 0 chr10 61079387 61079537 -79237228 + MER63A DNA MER1_type 49 210 0 1394 194 67 53 chr10 61079942 61080397 -79236368 + MLT1C LTR MaLR 1 467 0 295 299 26 68 chr10 61080409 61080526 -79236239 - MIR SINE MIR -73 135 24 3378 196 28 10 chr10 61081752 61082515 -79234250 + L1P LINE L1 1609 2388 -3758 2473 87 0 0 chr10 61082515 61082825 -79233940 + AluY SINE Alu 1 310 -1 3378 196 28 10 chr10 61082825 61082840 -79233925 + L1P LINE L1 2388 2401 -3745 1956 192 135 55 chr10 61082841 61083789 -79232976 + MER4-int LTR ERV1 29 1097 -5501 4483 176 46 2 chr10 61083797 61084842 -79231923 - L1PA7 LINE L1 -3 6151 5051 3157 113 8 4 chr10 61084868 61085381 -79231384 + L1P LINE L1 4555 5069 -1077 649 226 55 7 chr10 61086588 61086734 -79230031 - L1MC4a LINE L1 -1052 6756 6604 223 276 64 74 chr10 61087284 61087491 -79229274 - L2 LINE L2 -1857 1457 1255 647 256 12 12 chr10 61087556 61087716 -79229049 - MER5B DNA MER1_type -18 160 1 518 115 0 13 chr10 61088017 61088095 -79228670 - MADE1 DNA Mariner -3 77 1 392 295 10 90 chr10 61088592 61088792 -79227973 - MIR3 SINE MIR -5 203 20 228 302 88 33 chr10 61090138 61090320 -79226445 + L3 LINE CR1 1216 1407 -170 408 92 231 0 chr10 61090803 61090868 -79225897 + MADE1 DNA Mariner 1 80 0 563 266 59 25 chr10 61092275 61092478 -79224287 - MIR SINE MIR 0 262 53 859 230 23 9 chr10 61092603 61092820 -79223945 + L1MC3 LINE L1 7566 7785 0 2192 112 3 0 chr10 61092830 61093125 -79223640 + AluY SINE Alu 1 296 -15 1849 88 0 8 chr10 61093661 61093921 -79222844 + AluY SINE Alu 54 311 0 198 143 0 0 chr10 61094146 61094181 -79222584 + (A)n Simple_repeat Simple_repeat 1 35 0 611 271 47 12 chr10 61094227 61094397 -79222368 - MER58A DNA MER1_type -42 182 7 193 244 110 63 chr10 61095372 61095499 -79221266 + MIR SINE MIR 120 252 -10 1251 258 12 31 chr10 61096006 61096428 -79220337 + L1M4 LINE L1 2252 2665 -3481 1900 115 34 37 chr10 61096431 61096558 -79220207 + AluSx SINE Alu 1 127 -185 2399 92 13 0 chr10 61096558 61096864 -79219901 + AluSp SINE Alu 1 310 -3 1900 115 34 37 chr10 61096864 61097032 -79219733 + AluSx SINE Alu 127 295 -17 13183 114 21 17 chr10 61097132 61099171 -79217594 - L1P LINE L1 -3467 2679 633 237 345 64 0 chr10 61099670 61099821 -79216944 + MIR SINE MIR 57 215 -47 622 189 9 9 chr10 61100512 61100618 -79216147 - U6 snRNA snRNA -1 106 1 323 313 103 15 chr10 61102509 61102704 -79214061 - MIR SINE MIR -31 231 20 2799 20 0 0 chr10 61102762 61103067 -79213698 - L1PA2 LINE L1 -1 6154 5850 24 32 0 0 chr10 61103649 61103680 -79213085 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr10 61104742 61104769 -79211996 + AT_rich Low_complexity Low_complexity 1 27 0 315 0 0 0 chr10 61104769 61104808 -79211957 - HY3 scRNA scRNA -1 100 62 1270 238 75 64 chr10 61105988 61106585 -79210180 + L1ME1 LINE L1 5560 6163 -3 2048 142 3 0 chr10 61106892 61107188 -79209577 - AluSq SINE Alu -16 297 1 2202 190 80 18 chr10 61107338 61107848 -79208917 + L1 LINE L1 4687 5228 -918 445 320 69 6 chr10 61113425 61113600 -79203165 + MIR SINE MIR 4 189 -73 201 350 109 0 chr10 61113671 61113808 -79202957 - L3b LINE CR1 -130 1453 1302 267 93 0 0 chr10 61114065 61114108 -79202657 + (CA)n Simple_repeat Simple_repeat 2 44 0 29 47 0 0 chr10 61116072 61116115 -79200650 + AT_rich Low_complexity Low_complexity 1 43 0 474 230 0 9 chr10 61116140 61116253 -79200512 - L1 LINE L1 -1904 4944 4833 313 302 114 100 chr10 61116802 61117550 -79199215 - L1 LINE L1 -5422 1427 660 186 43 0 0 chr10 61117550 61117573 -79199192 + (TGGGGG)n Simple_repeat Simple_repeat 3 25 0 313 302 114 100 chr10 61117573 61117843 -79198922 - L1 LINE L1 -6189 660 395 579 275 106 50 chr10 61119222 61119470 -79197295 + MIR SINE MIR 4 261 -1 594 266 0 27 chr10 61119572 61119756 -79197009 + MER104 DNA MER2_type 1 179 -1 2729 114 13 8 chr10 61120078 61120471 -79196294 - L1PA12 LINE L1 0 6168 5774 248 274 103 8 chr10 61121356 61121473 -79195292 - L1ME LINE L1 -305 5816 5689 2205 96 3 3 chr10 61121665 61121982 -79194783 - AluSx SINE Alu 0 317 1 996 283 105 12 chr10 61121982 61122491 -79194274 - L1ME LINE L1 -743 5403 5018 3549 140 19 64 chr10 61122491 61123132 -79193633 - LTR9 LTR ERV1 0 612 1 996 283 105 12 chr10 61123132 61123258 -79193507 - L1ME LINE L1 -1128 5018 4905 1813 189 0 0 chr10 61123267 61123417 -79193348 - AluJb SINE Alu -26 286 134 2406 106 0 0 chr10 61123417 61123729 -79193036 - AluSx SINE Alu 0 312 1 1813 189 0 0 chr10 61123729 61123864 -79192901 - AluJb SINE Alu -177 135 1 245 302 147 26 chr10 61124653 61124885 -79191880 + MIR SINE MIR 3 262 0 234 344 55 16 chr10 61127723 61127851 -79188914 - MIR3 SINE MIR -64 144 12 379 136 0 57 chr10 61128647 61128735 -79188030 - L1PA15 LINE L1 -262 5903 5821 384 200 0 0 chr10 61129347 61129412 -79187353 - MER58A DNA MER1_type 0 224 160 868 201 25 0 chr10 61129416 61129575 -79187190 - AluJ SINE Alu -18 294 132 521 198 11 0 chr10 61129595 61129686 -79187079 - MER58A DNA MER1_type -15 92 1 2531 276 130 22 chr10 61130287 61130659 -79186106 + L2 LINE L2 1777 2107 -1206 2131 136 0 0 chr10 61130659 61130960 -79185805 - AluSx SINE Alu -11 301 1 2531 276 130 22 chr10 61130960 61131713 -79185052 + L2 LINE L2 2107 3036 -277 351 251 35 111 chr10 61132387 61132517 -79184248 - MER5A DNA MER1_type -5 184 73 1990 149 39 58 chr10 61132517 61132899 -79183866 + THE1C LTR MaLR 1 375 0 351 251 35 111 chr10 61132899 61132967 -79183798 - MER5A DNA MER1_type -116 73 1 464 309 26 7 chr10 61133308 61133460 -79183305 - MIR3 SINE MIR -1 207 53 804 159 0 36 chr10 61133642 61133780 -79182985 - AluJ SINE Alu -169 133 1 348 164 0 0 chr10 61134877 61134944 -79181821 + (TA)n Simple_repeat Simple_repeat 2 68 0 207 273 204 0 chr10 61135270 61135358 -79181407 + MIR SINE MIR 30 135 -127 200 271 209 23 chr10 61135468 61135597 -79181168 - L3 LINE CR1 -64 1513 1361 * 240 232 18 0 chr10 61135582 61135638 -79181127 - L2 LINE L2 0 3313 3257 364 328 178 9 chr10 61135669 61136007 -79180758 - L3 LINE CR1 -228 1349 955 4269 167 30 44 chr10 61136316 61137036 -79179729 + L1MB7 LINE L1 5116 5823 -351 2338 47 40 7 chr10 61137036 61137337 -79179428 - AluY SINE Alu 0 311 1 4269 167 30 44 chr10 61137337 61137644 -79179121 + L1MB7 LINE L1 5823 6133 -41 334 127 79 0 chr10 61139532 61139595 -79177170 - AluS SINE Alu -1 300 233 1626 91 4 4 chr10 61140217 61140448 -79176317 - L1PA7 LINE L1 -4 6150 5920 3152 102 9 78 chr10 61140516 61141054 -79175711 + MER1A DNA MER1_type 29 529 0 543 266 58 13 chr10 61141054 61141208 -79175557 - MIR SINE MIR -55 207 47 498 227 47 16 chr10 61141395 61141523 -79175242 - MER94 DNA DNA 0 134 3 245 306 8 75 chr10 61142220 61142354 -79174411 - MIR SINE MIR -44 218 94 318 222 11 111 chr10 61144153 61144243 -79172522 + MIR SINE MIR 39 119 -89 216 167 0 0 chr10 61144703 61144739 -79172026 + CT-rich Low_complexity Low_complexity 1 36 0 271 250 36 24 chr10 61144983 61145067 -79171698 - MIR3 SINE MIR -12 196 112 357 226 48 12 chr10 61146049 61146133 -79170632 - MIR SINE MIR -111 151 65 196 379 28 36 chr10 61146666 61146914 -79169851 + L2 LINE L2 2616 2861 -453 191 316 42 0 chr10 61147242 61147337 -79169428 - MIR SINE MIR -92 170 72 182 326 196 0 chr10 61147417 61147509 -79169256 + L2 LINE L2 3152 3261 -11 352 281 107 8 chr10 61147736 61147857 -79168908 + MER94 DNA DNA 2 134 0 395 285 35 35 chr10 61148893 61149065 -79167700 + MER20 DNA MER1_type 31 202 -17 1896 117 8 8 chr10 61150727 61150992 -79165773 + AluSq SINE Alu 46 310 -3 30 0 0 0 chr10 61151281 61151311 -79165454 + AT_rich Low_complexity Low_complexity 1 30 0 391 257 9 0 chr10 61151583 61151696 -79165069 + LTR43 LTR ERV1 183 296 -306 1741 224 120 35 chr10 61151952 61152781 -79163984 - LTR1B LTR ERV1 0 922 1 807 227 99 6 chr10 61153950 61154122 -79162643 + MER5A DNA MER1_type 1 188 -1 471 205 0 0 chr10 61154915 61154998 -79161767 + MER5B DNA MER1_type 92 174 -4 442 267 93 28 chr10 61155528 61155775 -79160990 + LTR37B LTR ERV1 198 460 -8 314 271 150 23 chr10 61156290 61156423 -79160342 + L1M2 LINE L1 815 964 -5885 309 298 24 0 chr10 61157086 61157254 -79159511 + (CA)n Simple_repeat Simple_repeat 2 173 0 262 326 11 0 chr10 61157327 61157502 -79159263 + (CA)n Simple_repeat Simple_repeat 1 177 0 1895 158 62 42 chr10 61157886 61157956 -79158809 + L1MB2 LINE L1 5706 5773 -398 1760 152 4 0 chr10 61157956 61158232 -79158533 + AluJo SINE Alu 6 282 -30 1895 158 62 42 chr10 61158232 61158616 -79158149 + L1MB2 LINE L1 5773 6169 -2 2537 81 0 0 chr10 61158626 61158933 -79157832 + AluSx SINE Alu 2 308 -4 519 263 83 85 chr10 61158945 61159413 -79157352 + L2 LINE L2 2710 3177 -136 2408 93 0 0 chr10 61159413 61159713 -79157052 + AluSx SINE Alu 1 300 -12 519 263 83 85 chr10 61159713 61159737 -79157028 + L2 LINE L2 3177 3200 -113 294 29 0 0 chr10 61159737 61159772 -79156993 + (TG)n Simple_repeat Simple_repeat 2 36 0 519 263 83 85 chr10 61159772 61159835 -79156930 + L2 LINE L2 3200 3263 -50 1852 160 3 3 chr10 61160039 61160332 -79156433 + AluSg1 SINE Alu 2 294 -15 227 190 50 30 chr10 61162280 61162380 -79154385 + (CGTG)n Simple_repeat Simple_repeat 2 103 0 1260 223 54 51 chr10 61164461 61164990 -79151775 + MER67C LTR ERV1 22 514 0 33 43 0 0 chr10 61165266 61165313 -79151452 + AT_rich Low_complexity Low_complexity 1 47 0 279 318 47 0 chr10 61165437 61165544 -79151221 - MIR SINE MIR -71 191 80 368 257 0 19 chr10 61165692 61165797 -79150968 + L1M3e LINE L1 466 568 -6921 452 342 39 19 chr10 61165862 61166119 -79150646 + L1M3e LINE L1 1414 1675 -4890 1261 291 30 12 chr10 61166356 61166951 -79149814 + L1M3e LINE L1 2007 2612 -4953 1672 193 19 52 chr10 61167245 61167613 -79149152 + MLT1A1 LTR MaLR 4 359 -6 676 190 69 137 chr10 61167638 61167716 -79149049 + L1ME2 LINE L1 5817 5899 -265 332 192 41 0 chr10 61167716 61167789 -79148976 + L1MB8 LINE L1 6087 6162 -16 676 190 69 137 chr10 61167789 61167965 -79148800 + L1ME2 LINE L1 5899 6041 -123 724 186 93 31 chr10 61167965 61168158 -79148607 - MER3 DNA MER1_type -4 205 1 676 190 69 137 chr10 61168158 61168266 -79148499 + L1ME2 LINE L1 6041 6155 -9 240 420 89 0 chr10 61169350 61169586 -79147179 + L2 LINE L2 2489 2745 -569 235 234 65 105 chr10 61169632 61169756 -79147009 + L2 LINE L2 2941 3059 -254 24 32 0 0 chr10 61169907 61169938 -79146827 + AT_rich Low_complexity Low_complexity 1 31 0 794 151 54 38 chr10 61169945 61170131 -79146634 + MER53 DNA DNA 1 189 0 285 98 0 0 chr10 61170784 61170825 -79145940 + (T)n Simple_repeat Simple_repeat 1 41 0 210 247 209 70 chr10 61170934 61171092 -79145673 - MIR3 SINE MIR -23 185 6 236 304 51 0 chr10 61171207 61171286 -79145479 + L3 LINE CR1 1229 1311 -266 328 243 84 0 chr10 61171358 61171465 -79145300 - MIR SINE MIR -11 251 136 2891 180 34 22 chr10 61171474 61172120 -79144645 + L1MB7 LINE L1 5522 6175 -9 21 36 0 0 chr10 61172678 61172706 -79144059 + AT_rich Low_complexity Low_complexity 1 28 0 354 212 95 91 chr10 61173170 61173434 -79143331 + L1ME4a LINE L1 5830 6094 -27 1869 158 7 10 chr10 61173957 61174254 -79142511 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr10 61174254 61174276 -79142489 + AT_rich Low_complexity Low_complexity 1 22 0 257 299 31 8 chr10 61174907 61175034 -79141731 + HAL1b LINE L1 1191 1320 -28 23 0 0 0 chr10 61175179 61175202 -79141563 + AT_rich Low_complexity Low_complexity 1 23 0 243 378 0 11 chr10 61176833 61176923 -79139842 + MIR SINE MIR 57 145 -117 420 67 0 0 chr10 61177608 61177668 -79139097 + (CA)n Simple_repeat Simple_repeat 2 61 0 227 285 29 79 chr10 61178867 61179045 -79137720 + MIR SINE MIR 12 230 -32 1877 146 58 3 chr10 61179297 61179625 -79137140 + MER7A DNA MER2_type 3 346 0 206 283 0 0 chr10 61179862 61179908 -79136857 + L2 LINE L2 3001 3046 -226 284 317 116 6 chr10 61180198 61180362 -79136403 - L2 LINE L2 -814 2500 2319 209 268 254 0 chr10 61180664 61180735 -79136030 - L2 LINE L2 0 3272 3184 2334 77 3 3 chr10 61181585 61181871 -79134894 - AluSq SINE Alu -27 286 1 331 323 103 7 chr10 61182325 61182480 -79134285 - MIR3 SINE MIR -9 199 30 1935 165 3 0 chr10 61182603 61182894 -79133871 - AluJb SINE Alu -20 292 1 341 320 82 32 chr10 61183118 61183337 -79133428 - MIR SINE MIR -22 240 11 298 139 120 28 chr10 61184462 61184570 -79132195 + L1MC5 LINE L1 7604 7721 -240 275 208 56 0 chr10 61184586 61184658 -79132107 + L1MC5 LINE L1 7812 7887 -74 310 323 98 0 chr10 61185169 61185333 -79131432 + MIR3 SINE MIR 15 194 -14 1993 133 3 7 chr10 61186404 61186689 -79130076 + AluSx SINE Alu 1 284 -28 22 56 0 0 chr10 61187035 61187071 -79129694 + AT_rich Low_complexity Low_complexity 1 36 0 238 205 5 261 chr10 61187611 61187826 -79128939 - MER5A DNA MER1_type 0 189 30 1979 104 11 0 chr10 61187828 61188096 -79128669 - AluSp SINE Alu -19 294 24 1691 167 21 34 chr10 61188501 61188884 -79127881 - L1MB8 LINE L1 0 6178 5801 265 262 76 7 chr10 61189534 61189679 -79127086 - L1ME4a LINE L1 -12 6109 5955 24 0 0 0 chr10 61189781 61189805 -79126960 + AT_rich Low_complexity Low_complexity 1 24 0 592 210 132 0 chr10 61190328 61190495 -79126270 + MER5A DNA MER1_type 1 189 0 990 238 128 24 chr10 61190495 61190878 -79125887 + L2 LINE L2 1328 1750 -1564 1844 233 25 16 chr10 61190878 61191367 -79125398 - L1ME2 LINE L1 0 6164 5672 883 269 45 5 chr10 61191827 61192050 -79124715 + MIR SINE MIR 1 232 -30 1425 201 90 12 chr10 61192052 61192375 -79124390 + MER7A DNA MER2_type 1 346 0 2430 93 0 0 chr10 61192533 61192844 -79123921 + AluY SINE Alu 1 311 0 2460 83 0 13 chr10 61192902 61193216 -79123549 + AluY SINE Alu 1 310 -1 275 250 197 8 chr10 61194067 61194199 -79122566 + MLT1L LTR MaLR 157 313 -302 * 347 341 12 24 chr10 61194177 61194344 -79122421 + MLT1L LTR MaLR 441 605 -10 197 261 87 29 chr10 61194640 61194709 -79122056 + L2 LINE L2 3238 3310 -3 467 219 21 0 chr10 61195401 61195497 -79121268 + MER5A DNA MER1_type 9 106 -83 22 0 0 0 chr10 61195859 61195881 -79120884 + AT_rich Low_complexity Low_complexity 1 22 0 1647 158 63 14 chr10 61197127 61197411 -79119354 + AluJb SINE Alu 1 298 -14 220 269 58 0 chr10 61197855 61197907 -79118858 + MER5A DNA MER1_type 135 189 0 1569 183 11 7 chr10 61198495 61198774 -79117991 - AluJb SINE Alu -8 304 25 391 303 32 27 chr10 61200961 61201149 -79115616 + MER5A DNA MER1_type 1 189 0 2100 141 0 3 chr10 61201775 61202087 -79114678 + AluSx SINE Alu 1 311 -1 1199 137 5 68 chr10 61202119 61202338 -79114427 + AluJo SINE Alu 76 280 -32 858 208 0 0 chr10 61202886 61203040 -79113725 + FAM SINE Alu 1 154 -31 655 173 14 16 chr10 61203045 61203319 -79113446 + GA-rich Low_complexity Low_complexity 1 273 0 22 56 0 0 chr10 61203384 61203420 -79113345 + AT_rich Low_complexity Low_complexity 1 36 0 740 230 109 22 chr10 61203698 61203928 -79112837 - MIR SINE MIR -11 251 2 470 296 84 35 chr10 61204953 61205443 -79111322 + L1MC5 LINE L1 7270 7783 -178 24 67 0 0 chr10 61205644 61205689 -79111076 + AT_rich Low_complexity Low_complexity 1 45 0 35 0 0 0 chr10 61206440 61206475 -79110290 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 61207262 61207283 -79109482 + AT_rich Low_complexity Low_complexity 1 21 0 759 131 0 15 chr10 61207394 61207524 -79109241 + L1MA6 LINE L1 6163 6290 -10 422 340 57 21 chr10 61209640 61209834 -79106931 - MIR SINE MIR -4 258 58 274 364 38 15 chr10 61210741 61210873 -79105892 - MIR SINE MIR -9 253 119 1776 151 10 20 chr10 61210892 61211206 -79105559 + AluSx SINE Alu 6 316 0 230 388 157 0 chr10 61213466 61213587 -79103178 + L2 LINE L2 3133 3272 0 2256 122 49 120 chr10 61214190 61214657 -79102108 + Tigger2 DNA MER2_type 1 2718 0 385 274 103 54 chr10 61216202 61216406 -79100359 - L2 LINE L2 -4 3309 3096 669 197 110 0 chr10 61216997 61217124 -79099641 + FAM SINE Alu 11 151 -34 258 269 8 108 chr10 61217320 61217419 -79099346 + MIR SINE MIR 28 113 -149 1985 132 20 0 chr10 61217419 61217715 -79099050 - AluSx SINE Alu -10 302 1 258 269 8 108 chr10 61217715 61217745 -79099020 + MIR SINE MIR 113 144 -118 264 171 0 0 chr10 61217776 61217817 -79098948 + 5S rRNA rRNA 2 42 -79 268 277 116 18 chr10 61217943 61218055 -79098710 + MIR SINE MIR 90 212 -50 225 65 0 0 chr10 61218101 61218132 -79098633 + (GA)n Simple_repeat Simple_repeat 2 32 0 357 267 93 35 chr10 61218257 61218429 -79098336 + MIR SINE MIR 70 251 -11 324 288 42 25 chr10 61218786 61218904 -79097861 - MER5A DNA MER1_type -4 185 66 215 316 82 38 chr10 61219634 61219792 -79096973 - L2 LINE L2 -4 3309 3145 464 238 57 0 chr10 61220011 61220116 -79096649 - L2 LINE L2 -10 3303 3193 2401 98 48 21 chr10 61220420 61220796 -79095969 + L1PA16 LINE L1 5778 6163 -3 736 238 101 16 chr10 61223091 61223339 -79093426 - LTR37A LTR ERV1 -1 425 157 221 95 0 24 chr10 61223574 61223616 -79093149 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 4385 31 0 4 chr10 61223616 61224136 -79092629 - L1PA4 LINE L1 -24 6131 5614 227 224 0 17 chr10 61224572 61224630 -79092135 - MER5B DNA MER1_type -120 58 2 2324 115 19 25 chr10 61224693 61225059 -79091706 + THE1B LTR MaLR 1 364 0 246 174 0 0 chr10 61227322 61227368 -79089397 + (CATA)n Simple_repeat Simple_repeat 2 47 0 295 297 242 8 chr10 61227499 61227627 -79089138 - MER5B DNA MER1_type 0 178 21 241 231 0 19 chr10 61227978 61228030 -79088735 - L2 LINE L2 -4 3268 3218 2208 129 3 0 chr10 61228477 61228788 -79087977 - AluSp SINE Alu 0 313 2 326 197 127 0 chr10 61228857 61228928 -79087837 - MER116 DNA Mariner 0 80 1 942 201 9 57 chr10 61228978 61229207 -79087558 - MER20 DNA MER1_type -1 218 1 301 182 88 157 chr10 61230707 61230866 -79085899 - MIR SINE MIR 0 262 115 310 282 0 0 chr10 61230911 61230989 -79085776 + MER96 DNA MER1_type? 98 175 0 22 0 0 0 chr10 61231329 61231351 -79085414 + AT_rich Low_complexity Low_complexity 1 22 0 369 286 48 18 chr10 61231514 61231682 -79085083 + L1MC4a LINE L1 5726 5898 -1910 24 77 0 0 chr10 61231906 61231958 -79084807 + AT_rich Low_complexity Low_complexity 1 52 0 607 231 45 6 chr10 61232143 61232299 -79084466 + MER5A DNA MER1_type 26 187 -2 273 300 143 35 chr10 61232308 61232479 -79084286 + MER5B DNA MER1_type 1 177 -1 245 260 13 13 chr10 61232917 61232994 -79083771 - MER5A DNA MER1_type -28 161 85 205 281 49 12 chr10 61233611 61233693 -79083072 - MIR3 SINE MIR -15 193 109 29 0 0 0 chr10 61234251 61234280 -79082485 + AT_rich Low_complexity Low_complexity 1 29 0 570 244 16 83 chr10 61236002 61236244 -79080521 + MER106A DNA MER1_type 1 226 -10 581 278 131 15 chr10 61240201 61240460 -79076305 - L2 LINE L2 -5 3308 3020 286 311 118 30 chr10 61241301 61241571 -79075194 + L1MC4a LINE L1 5625 5918 -1890 26 0 0 0 chr10 61242616 61242642 -79074123 + AT_rich Low_complexity Low_complexity 1 26 0 846 273 70 32 chr10 61243501 61243846 -79072919 + L1MC/D LINE L1 5412 5769 -2039 21 82 0 0 chr10 61244098 61244147 -79072618 + AT_rich Low_complexity Low_complexity 1 49 0 202 345 0 0 chr10 61244369 61244427 -79072338 + L2 LINE L2 3163 3220 -93 187 302 0 0 chr10 61245797 61245850 -79070915 + MIR3 SINE MIR 150 202 -6 1979 155 0 0 chr10 61246457 61246747 -79070018 - AluJo SINE Alu -17 295 6 625 261 41 5 chr10 61247289 61247481 -79069284 - MIR SINE MIR -62 146 1 2136 120 0 7 chr10 61247506 61247805 -79068960 - AluSg SINE Alu -11 299 3 1480 85 127 21 chr10 61247808 61248044 -79068721 - AluSg SINE Alu -2 308 48 291 121 0 0 chr10 61248072 61248130 -79068635 + (GA)n Simple_repeat Simple_repeat 1 58 0 1909 128 16 53 chr10 61248623 61248821 -79067944 - AluSx SINE Alu -2 310 127 198 0 0 0 chr10 61248821 61248843 -79067922 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1909 128 16 53 chr10 61248843 61248963 -79067802 - AluSx SINE Alu -185 127 4 257 279 0 51 chr10 61249210 61249289 -79067476 - MIR SINE MIR -70 192 118 327 49 0 0 chr10 61249554 61249595 -79067170 + (CA)n Simple_repeat Simple_repeat 1 41 0 23 86 0 0 chr10 61250605 61250663 -79066102 + AT_rich Low_complexity Low_complexity 1 58 0 1042 252 69 32 chr10 61251996 61252628 -79064137 - HsTC2 DNA Tc2 0 1900 2 2278 126 19 19 chr10 61253152 61253516 -79063249 + THE1B LTR MaLR 1 364 0 308 342 111 26 chr10 61253642 61253832 -79062933 + MIR SINE MIR 51 256 -6 26 0 0 0 chr10 61253863 61253889 -79062876 + AT_rich Low_complexity Low_complexity 1 26 0 398 285 64 23 chr10 61254301 61254473 -79062292 + Charlie8 DNA MER1_type 6 184 -2233 240 91 23 0 chr10 61255110 61255154 -79061611 - MADE1 DNA Mariner -35 45 1 1800 179 0 10 chr10 61255606 61255918 -79060847 + AluJo SINE Alu 1 309 -3 21 36 0 0 chr10 61255922 61255950 -79060815 + AT_rich Low_complexity Low_complexity 1 28 0 237 204 0 0 chr10 61257156 61257205 -79059560 + L1MB5 LINE L1 5570 5618 -566 2098 129 12 19 chr10 61257205 61257530 -79059235 + MER1B DNA MER1_type 17 339 0 1544 344 80 67 chr10 61257530 61258094 -79058671 + L1MB5 LINE L1 5612 6182 -1 2321 92 25 0 chr10 61259524 61259849 -79056916 - L1PB1 LINE L1 -8 6143 5811 356 341 98 5 chr10 61259851 61260056 -79056709 - MIR SINE MIR -19 243 20 1410 104 0 0 chr10 61260238 61260420 -79056345 + AluSg/x SINE Alu 87 268 -44 249 98 0 0 chr10 61260432 61260473 -79056292 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 231 288 0 55 chr10 61262367 61262440 -79054325 + L2 LINE L2 3222 3290 -23 1364 102 0 5 chr10 61262823 61263009 -79053756 - AluSg/x SINE Alu -30 282 98 1224 178 60 69 chr10 61263786 61264118 -79052647 - MER46C DNA MER2_type 0 338 10 22 0 0 0 chr10 61264168 61264190 -79052575 + AT_rich Low_complexity Low_complexity 1 22 0 1825 158 80 0 chr10 61265549 61265860 -79050905 - MER1B DNA MER1_type -1 336 1 13944 129 43 21 chr10 61266297 61266980 -79049785 + Tigger1 DNA MER2_type 22 689 -1729 1559 193 3 29 chr10 61266980 61267291 -79049474 + AluJo SINE Alu 1 303 -9 13944 129 43 21 chr10 61267291 61268953 -79047812 + Tigger1 DNA MER2_type 689 2418 0 1253 197 101 61 chr10 61269098 61269473 -79047292 + MLT1B LTR MaLR 1 390 0 213 39 0 0 chr10 61273280 61273306 -79043459 + (GA)n Simple_repeat Simple_repeat 1 26 0 213 39 0 0 chr10 61273754 61273780 -79042985 + (CCAA)n Simple_repeat Simple_repeat 3 28 0 2216 121 33 36 chr10 61277749 61278114 -79038651 + THE1B LTR MaLR 1 364 0 2474 82 0 0 chr10 61279437 61279743 -79037022 + AluSc SINE Alu 1 306 -3 207 0 0 0 chr10 61279759 61279782 -79036983 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 298 271 116 26 chr10 61280360 61280515 -79036250 - L1MC/D LINE L1 -2262 5546 5378 718 163 41 64 chr10 61281706 61281812 -79034953 - L1M LINE L1 -884 5428 5326 2209 94 0 47 chr10 61281812 61282130 -79034635 - AluSg SINE Alu -7 303 1 718 163 41 64 chr10 61282130 61282195 -79034570 - L1M LINE L1 -986 5326 5261 3654 45 0 5 chr10 61282222 61282668 -79034097 + L1PA7 LINE L1 5703 6146 -8 47 0 0 0 chr10 61283033 61283080 -79033685 + AT_rich Low_complexity Low_complexity 1 47 0 675 179 14 0 chr10 61283080 61283220 -79033545 - L1 LINE L1 -864 5282 5141 * 3952 155 31 4 chr10 61283214 61283897 -79032868 + L1MA6 LINE L1 5443 6143 -157 441 107 0 0 chr10 61283897 61283972 -79032793 - Alu SINE Alu 0 310 236 238 94 0 0 chr10 61283976 61284008 -79032757 - Alu SINE Alu -33 269 238 1928 98 23 11 chr10 61284012 61284276 -79032489 - AluSg SINE Alu -43 267 1 673 160 56 7 chr10 61284278 61284422 -79032343 + L1MA6 LINE L1 6137 6287 -13 1671 191 7 0 chr10 61284731 61285009 -79031756 + AluJo SINE Alu 3 282 -30 190 233 0 23 chr10 61285213 61285256 -79031509 - L2 LINE L2 -4 3309 3268 305 303 28 56 chr10 61285316 61285458 -79031307 + MIR3 SINE MIR 68 205 -3 2043 157 0 0 chr10 61286134 61286447 -79030318 + AluSq SINE Alu 1 313 0 1934 157 38 24 chr10 61287344 61287714 -79029051 - THE1C LTR MaLR 0 375 1 1383 191 85 78 chr10 61287813 61288375 -79028390 + L1MC5 LINE L1 6693 7255 -733 466 208 30 143 chr10 61288416 61288553 -79028212 + L1MC5 LINE L1 7208 7311 -650 2119 117 0 0 chr10 61288553 61288875 -79027890 - AluSg SINE Alu 0 322 1 466 208 30 143 chr10 61288875 61288967 -79027798 + L1MC5 LINE L1 7311 7412 -549 1674 156 46 17 chr10 61289110 61289412 -79027353 + AluJo SINE Alu 1 311 -1 226 239 150 42 chr10 61289435 61289602 -79027163 + L1MC5 LINE L1 7487 7671 -290 275 238 56 32 chr10 61289677 61289803 -79026962 + L1MC5 LINE L1 7797 7925 -36 1240 189 39 4 chr10 61290644 61290904 -79025861 + MER33 DNA MER1_type 1 269 -55 1127 213 65 18 chr10 61291156 61291433 -79025332 + MER2 DNA MER2_type 56 345 0 450 149 32 85 chr10 61291752 61291916 -79024849 - AluJb SINE Alu 0 354 196 5370 78 7 0 chr10 61291961 61292691 -79024074 + L1MA1 LINE L1 5559 6293 -9 26 64 0 0 chr10 61292693 61292740 -79024025 + AT_rich Low_complexity Low_complexity 1 47 0 2212 92 7 16 chr10 61292949 61293253 -79023512 + AluSx SINE Alu 1 301 -11 2734 224 27 55 chr10 61295630 61296325 -79020440 - LTR8 LTR ERV1 0 691 16 1719 175 0 7 chr10 61299416 61299702 -79017063 - AluJb SINE Alu -28 284 1 715 319 102 27 chr10 61299979 61300390 -79016375 + L2 LINE L2 2464 2905 -409 257 327 113 13 chr10 61300424 61300583 -79016182 - MIR SINE MIR -14 248 74 508 296 133 74 chr10 61300750 61301156 -79015609 + L2 LINE L2 2883 3312 -1 282 95 0 0 chr10 61301642 61301684 -79015081 + (CA)n Simple_repeat Simple_repeat 2 43 0 2395 223 51 30 chr10 61301692 61302360 -79014405 + L1MC3 LINE L1 7104 7785 0 476 241 9 17 chr10 61302538 61302654 -79014111 - MIR SINE MIR 0 262 148 730 216 207 37 chr10 61303060 61303388 -79013377 + Charlie4a DNA MER1_type 1 384 -124 201 455 0 0 chr10 61304168 61304267 -79012498 - L3 LINE CR1 -1288 289 191 206 345 27 27 chr10 61304779 61304889 -79011876 - L3b LINE CR1 -45 1538 1429 775 152 0 8 chr10 61305780 61305905 -79010860 + AluJb SINE Alu 1 124 -188 180 97 0 0 chr10 61305907 61305938 -79010827 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 257 289 62 62 chr10 61306208 61306336 -79010429 + MIR SINE MIR 82 209 -53 25 51 0 0 chr10 61306774 61306813 -79009952 + AT_rich Low_complexity Low_complexity 1 39 0 425 341 47 18 chr10 61307702 61307872 -79008893 - MIR SINE MIR -86 176 2 230 323 197 8 chr10 61308578 61308705 -79008060 + MIR SINE MIR 106 256 -6 609 296 73 9 chr10 61309578 61309811 -79006954 - MIR SINE MIR -13 249 2 353 267 20 6 chr10 61310514 61310690 -79006075 + L1 LINE L1 5244 5421 -700 1954 101 34 4 chr10 61310722 61310989 -79005776 + AluSq SINE Alu 21 295 -18 1975 86 0 0 chr10 61312961 61313218 -79003547 - AluY SINE Alu -9 302 46 2089 125 7 0 chr10 61314266 61314553 -79002212 + AluSx SINE Alu 3 291 -21 353 213 0 0 chr10 61314657 61314732 -79002033 + MER116 DNA Mariner 5 79 -1 413 224 144 8 chr10 61314799 61314924 -79001841 - MIR SINE MIR -11 251 110 465 285 133 40 chr10 61316800 61317326 -78999439 - L1ME4a LINE L1 -53 6068 5494 228 271 44 49 chr10 61317456 61317659 -78999106 - L1ME4a LINE L1 -814 5332 5131 327 297 44 0 chr10 61317988 61318079 -78998686 + MIR SINE MIR 154 248 -14 426 320 31 44 chr10 61318292 61318520 -78998245 - L1M4 LINE L1 -1958 4188 3964 441 279 19 57 chr10 61318534 61318692 -78998073 - MIR SINE MIR -110 152 1 333 344 20 2 chr10 61320133 61320276 -78996489 - MIR SINE MIR -64 144 11 1090 208 0 10 chr10 61320833 61321040 -78995725 - MIR SINE MIR -30 232 28 693 242 137 9 chr10 61321331 61321542 -78995223 - MIR SINE MIR -15 247 10 234 0 0 0 chr10 61321635 61321661 -78995104 + (CAATG)n Simple_repeat Simple_repeat 5 30 0 256 248 119 18 chr10 61322488 61322597 -78994168 + MIR SINE MIR 116 235 -27 2029 135 7 0 chr10 61322725 61323014 -78993751 - AluSg SINE Alu -19 291 1 377 245 38 47 chr10 61323050 61323156 -78993609 + L2 LINE L2 3168 3272 0 593 251 27 44 chr10 61324196 61324379 -78992386 + MER77 LTR ERV1 41 220 -385 1652 123 20 0 chr10 61324442 61324694 -78992071 + L1PA15 LINE L1 5907 6163 -2 1324 228 37 21 chr10 61324794 61325110 -78991655 + MER77 LTR ERV1 302 597 -8 21 0 0 0 chr10 61325193 61325214 -78991551 + AT_rich Low_complexity Low_complexity 1 21 0 248 264 60 42 chr10 61325502 61325669 -78991096 + MLT1H1 LTR MaLR 141 310 -239 357 199 36 11 chr10 61325756 61325843 -78990922 + MLT1H1 LTR MaLR 464 592 -3 489 212 35 0 chr10 61326530 61326643 -78990122 - Charlie4a DNA MER1_type -29 479 363 1022 205 87 19 chr10 61326730 61327042 -78989723 - Charlie4a DNA MER1_type -125 383 51 28 29 0 0 chr10 61327870 61327905 -78988860 + AT_rich Low_complexity Low_complexity 1 35 0 930 308 0 0 chr10 61328242 61328469 -78988296 - MIR SINE MIR -21 241 15 180 0 0 0 chr10 61329151 61329171 -78987594 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr10 61329482 61329502 -78987263 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 61330284 61330305 -78986460 + AT_rich Low_complexity Low_complexity 1 21 0 204 111 0 0 chr10 61330415 61330451 -78986314 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 272 287 81 0 chr10 61330562 61330649 -78986116 + MIR SINE MIR 58 151 -111 352 297 100 62 chr10 61330833 61331301 -78985464 - L2 LINE L2 -13 3300 2815 660 308 26 23 chr10 61331311 61331613 -78985152 - L2 LINE L2 -646 2668 2366 1880 133 0 18 chr10 61331720 61332034 -78984731 + AluSc SINE Alu 1 309 0 328 182 80 11 chr10 61332234 61332322 -78984443 - L1ME4a LINE L1 -40 6081 5988 649 213 0 8 chr10 61332940 61333062 -78983703 + FLAM_C SINE Alu 2 122 -21 1420 208 26 13 chr10 61333078 61333386 -78983379 + AluJo SINE Alu 1 312 0 21 71 0 0 chr10 61333536 61333578 -78983187 + AT_rich Low_complexity Low_complexity 1 42 0 4929 77 27 3 chr10 61334855 61335527 -78981238 + LTR12 LTR ERV1 1 688 0 23 0 0 0 chr10 61336138 61336161 -78980604 + AT_rich Low_complexity Low_complexity 1 23 0 226 344 70 39 chr10 61336770 61336898 -78979867 - MIR3 SINE MIR -65 143 12 670 322 107 5 chr10 61337849 61338222 -78978543 + L1ME4a LINE L1 5477 5887 -234 4517 266 91 39 chr10 61338318 61340605 -78976160 + L1MEc LINE L1 111 2515 -3881 * 15419 27 5 1 chr10 61340588 61343262 -78973503 + L1PA3 LINE L1 3468 6152 -3 294 203 55 70 chr10 61343264 61343392 -78973373 + L1MEc LINE L1 2451 2576 -3639 2861 82 70 5 chr10 61343594 61343974 -78972791 + MLT2A1 LTR ERVL 2 413 -31 462 36 0 0 chr10 61343974 61344030 -78972735 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2861 82 70 5 chr10 61344030 61344065 -78972700 + MLT2A1 LTR ERVL 413 444 0 438 305 4 52 chr10 61344343 61344576 -78972189 + MLT1K LTR MaLR 365 586 -2 2111 133 3 16 chr10 61345921 61346237 -78970528 + AluSx SINE Alu 1 312 0 325 329 115 39 chr10 61346283 61346910 -78969855 - L2 LINE L2 -17 3296 2614 587 250 0 0 chr10 61346910 61347038 -78969727 + FLAM_A SINE Alu 2 129 -4 350 309 165 24 chr10 61347135 61347384 -78969381 - L2 LINE L2 -1156 2158 1875 22 0 0 0 chr10 61348045 61348067 -78968698 + AT_rich Low_complexity Low_complexity 1 22 0 2380 68 3 3 chr10 61348333 61348626 -78968139 - AluSc SINE Alu -16 293 1 360 295 151 19 chr10 61348765 61349406 -78967359 + L1MEc LINE L1 3276 4001 -2214 1244 120 0 0 chr10 61349412 61349579 -78967186 + AluSc SINE Alu 1 167 -142 244 89 22 0 chr10 61351054 61351099 -78965666 + L1M4 LINE L1 2877 2922 -3224 529 248 9 0 chr10 61351099 61351212 -78965553 + FLAM_A SINE Alu 2 115 -18 2541 105 5 24 chr10 61351213 61351584 -78965181 + THE1B LTR MaLR 1 364 0 959 170 5 32 chr10 61351600 61351788 -78964977 + AluJo SINE Alu 118 300 -12 5136 236 106 30 chr10 61351792 61352446 -78964319 + L1M4 LINE L1 2925 3528 -2636 6678 142 26 25 chr10 61352446 61353675 -78963090 - Tigger3b DNA MER2_type -1 1230 1 5136 236 106 30 chr10 61353675 61354664 -78962101 + L1M4 LINE L1 3528 4440 -1724 1770 180 7 0 chr10 61354664 61354958 -78961807 - AluJb SINE Alu -16 296 1 5136 236 106 30 chr10 61354958 61355632 -78961133 + L1M4 LINE L1 4440 5426 -738 1385 172 48 22 chr10 61356127 61356395 -78960370 - AluJo SINE Alu -13 299 25 325 143 0 0 chr10 61356420 61356469 -78960296 - Alu SINE Alu -257 51 3 27 29 0 0 chr10 61356566 61356600 -78960165 + AT_rich Low_complexity Low_complexity 1 34 0 811 291 45 8 chr10 61356724 61356971 -78959794 - MIR SINE MIR -5 257 2 241 213 33 0 chr10 61357390 61357451 -78959314 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 1494 198 0 42 chr10 61357461 61357744 -78959021 - AluJo SINE Alu -41 271 1 828 215 70 0 chr10 61358165 61358337 -78958428 - MER58A DNA MER1_type -15 209 26 711 262 105 45 chr10 61358389 61358771 -78957994 - MLT1I LTR MaLR -2 407 3 183 42 0 0 chr10 61359172 61359196 -78957569 + (CA)n Simple_repeat Simple_repeat 2 25 0 211 254 68 0 chr10 61360185 61360244 -78956521 - MIR SINE MIR -193 69 7 22 80 0 0 chr10 61360325 61360375 -78956390 + AT_rich Low_complexity Low_complexity 1 50 0 478 272 44 0 chr10 61360971 61361085 -78955680 + L2 LINE L2 3195 3313 0 205 264 19 94 chr10 61361856 61361962 -78954803 + MIR SINE MIR 119 216 -46 22 70 0 0 chr10 61363466 61363509 -78953256 + AT_rich Low_complexity Low_complexity 1 43 0 232 388 0 0 chr10 61363668 61363748 -78953017 + L2 LINE L2 3189 3268 -4 3700 139 30 48 chr10 61364126 61364858 -78951907 + L1MB2 LINE L1 5446 6164 -7 641 148 102 51 chr10 61365206 61365382 -78951383 - MER53 DNA DNA 0 189 5 533 15 15 0 chr10 61365424 61365490 -78951275 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 557 218 14 139 chr10 61366125 61366341 -78950424 - MER5A DNA MER1_type 0 189 1 2257 95 0 3 chr10 61366973 61367267 -78949498 + AluSg SINE Alu 1 293 -17 1614 298 88 29 chr10 61367724 61368079 -78948686 + L2 LINE L2 1822 2155 -1159 1820 173 3 7 chr10 61368079 61368385 -78948380 - AluJo SINE Alu -7 305 1 1614 298 88 29 chr10 61368385 61368914 -78947851 + L2 LINE L2 2155 2758 -556 493 283 91 87 chr10 61368915 61369410 -78947355 + MLT1J LTR MaLR 1 497 -14 502 303 80 59 chr10 61369421 61369919 -78946846 + L2 LINE L2 2755 3264 -49 1367 224 52 89 chr10 61369922 61370369 -78946396 + MLT1F LTR MaLR 108 537 -5 359 183 0 0 chr10 61370392 61370452 -78946313 + MER21B LTR ERV1 21 80 -783 2434 240 97 32 chr10 61370481 61371253 -78945512 + MER21B LTR ERV1 19 840 -23 2426 86 0 3 chr10 61371612 61371913 -78944852 - AluSq SINE Alu -13 300 1 521 224 71 51 chr10 61372433 61372495 -78944270 - L1ME2 LINE L1 -11 6153 6094 2650 134 36 2 chr10 61372495 61372906 -78943859 - MSTB LTR MaLR -1 425 1 521 224 71 51 chr10 61372906 61373039 -78943726 - L1ME2 LINE L1 -70 6094 5954 1570 135 33 0 chr10 61375019 61375293 -78941472 + L1MA4 LINE L1 6007 6289 -11 312 91 0 0 chr10 61376048 61376092 -78940673 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr10 61376795 61376816 -78939949 + AT_rich Low_complexity Low_complexity 1 21 0 3817 138 17 71 chr10 61377508 61378116 -78938649 + MER50 LTR ERV1 1 563 -171 2044 148 3 0 chr10 61378116 61378426 -78938339 + AluSx SINE Alu 1 311 -1 3817 138 17 71 chr10 61378426 61378563 -78938202 + MER50 LTR ERV1 563 706 -28 346 289 275 15 chr10 61378722 61378995 -78937770 + L2 LINE L2 2029 2372 -942 928 266 39 4 chr10 61379004 61379237 -78937528 + MIR SINE MIR 1 241 -21 519 342 145 30 chr10 61379299 61380005 -78936760 + L2 LINE L2 2432 3228 -44 335 233 103 62 chr10 61380114 61380132 -78936633 - MIR SINE MIR -91 171 155 1671 186 21 3 chr10 61380132 61380423 -78936342 + AluJo SINE Alu 1 296 -16 335 233 103 62 chr10 61380423 61380550 -78936215 - MIR SINE MIR -107 155 20 308 300 33 0 chr10 61380577 61380667 -78936098 + MIR SINE MIR 37 129 -133 1184 148 82 0 chr10 61380680 61380924 -78935841 + MER21A LTR ERV1 1 264 -667 2682 178 45 17 chr10 61380930 61381464 -78935301 + MER21A LTR ERV1 377 925 -6 185 246 72 43 chr10 61382005 61382074 -78934691 - MIR3 SINE MIR -124 84 14 302 273 0 0 chr10 61382109 61382197 -78934568 + GA-rich Low_complexity Low_complexity 3 90 0 234 211 160 26 chr10 61384257 61384451 -78932314 + L1MC/D LINE L1 4556 4775 -1371 * 364 274 19 40 chr10 61384448 61384700 -78932065 + L1MC/D LINE L1 5294 5544 -2241 401 254 70 0 chr10 61384799 61384913 -78931852 - MIR SINE MIR -4 258 137 1662 165 60 3 chr10 61385152 61385467 -78931298 + MER7A DNA MER2_type 16 346 0 4387 155 36 34 chr10 61385516 61385797 -78930968 + L1MB1 LINE L1 5203 5482 -686 183 80 0 0 chr10 61385797 61385822 -78930943 + (CA)n Simple_repeat Simple_repeat 2 26 0 4387 155 36 34 chr10 61385822 61386345 -78930420 + L1MB1 LINE L1 5482 6019 -149 1876 128 50 3 chr10 61386345 61386627 -78930138 - AluSq SINE Alu -18 295 1 4387 155 36 34 chr10 61386627 61386778 -78929987 + L1MB1 LINE L1 6019 6168 0 431 275 35 35 chr10 61386847 61386928 -78929837 - MIR SINE MIR -119 143 60 2421 84 0 6 chr10 61386928 61387239 -78929526 + AluSc SINE Alu 1 309 0 431 275 35 35 chr10 61387239 61387299 -78929466 - MIR SINE MIR -201 61 2 1714 190 3 0 chr10 61387379 61387669 -78929096 + AluJb SINE Alu 1 291 -21 2111 132 0 10 chr10 61387731 61388034 -78928731 + AluSx SINE Alu 1 300 -12 1569 129 46 16 chr10 61388378 61388681 -78928084 + L1P LINE L1 11 322 -5824 711 122 65 0 chr10 61389452 61389575 -78927190 + L1PA16 LINE L1 6034 6164 -2 302 306 0 0 chr10 61389692 61389777 -78926988 + MIR SINE MIR 168 252 -10 646 256 41 14 chr10 61390704 61390923 -78925842 + Charlie2 DNA MER1_type 88 312 -2550 672 226 42 35 chr10 61390949 61391210 -78925555 + Charlie2 DNA MER1_type 1853 2115 -747 40605 32 27 2 chr10 61391222 61397203 -78919562 + L1PA3 LINE L1 73 6155 0 1997 139 3 0 chr10 61397216 61397540 -78919225 + L1PB1 LINE L1 5819 6143 -8 1736 225 78 24 chr10 61397563 61398234 -78918531 + Charlie2 DNA MER1_type 2127 2833 -29 313 273 139 19 chr10 61398827 61399110 -78917655 + L1MC5 LINE L1 4735 5051 -1095 1031 258 102 67 chr10 61399381 61399919 -78916846 + L1MC5 LINE L1 5363 5919 -1889 627 79 0 0 chr10 61399940 61400029 -78916736 + MER83C LTR ERV1 221 309 -64 1818 171 0 23 chr10 61400238 61400543 -78916222 + AluJo SINE Alu 1 298 -14 1814 197 69 113 chr10 61400875 61401763 -78915002 + L1MC5 LINE L1 7061 7909 -52 645 232 25 87 chr10 61402090 61402361 -78914404 + MLT1H1 LTR MaLR 1 253 -289 319 314 155 35 chr10 61403592 61403818 -78912947 - MIR SINE MIR 0 262 10 1715 153 48 10 chr10 61404075 61404370 -78912395 - AluJb SINE Alu 0 312 7 3204 81 29 19 chr10 61404425 61404906 -78911859 + LTR19A LTR ERV1 1 486 0 40 37 0 0 chr10 61405865 61405919 -78910846 + AT_rich Low_complexity Low_complexity 1 54 0 1933 155 20 15 chr10 61406053 61406394 -78910371 - MER61A LTR ERV1 0 343 1 2609 204 92 45 chr10 61406734 61407329 -78909436 + L1ME LINE L1 325 963 -5082 215 31 31 0 chr10 61407329 61407361 -78909404 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2609 204 92 45 chr10 61407361 61407500 -78909265 + L1ME LINE L1 963 1094 -4951 320 75 75 0 chr10 61407500 61407553 -78909212 - MLT2B1 LTR ERVL 0 520 464 1192 153 30 75 chr10 61407606 61407847 -78908918 - Tigger2 DNA MER2_type -1 2717 2488 1727 154 0 11 chr10 61407847 61408119 -78908646 + AluJb SINE Alu 44 312 0 1192 153 30 75 chr10 61408119 61408145 -78908620 - Tigger2 DNA MER2_type -230 2488 2462 4553 147 20 1 chr10 61408200 61408942 -78907823 - Tigger2 DNA MER2_type -1961 757 2 2162 199 72 16 chr10 61408949 61409382 -78907383 - MLT2B1 LTR ERVL -63 457 1 2839 188 41 50 chr10 61409383 61409489 -78907276 + L1ME LINE L1 1092 1197 -5367 1016 67 0 0 chr10 61409489 61409624 -78907141 + L1MA2 LINE L1 6170 6304 0 2839 188 41 50 chr10 61409624 61409639 -78907126 + L1ME LINE L1 1197 1211 -5353 243 0 0 0 chr10 61409639 61409666 -78907099 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2839 188 41 50 chr10 61409666 61410325 -78906440 + L1ME LINE L1 1211 1955 -4609 745 160 0 34 chr10 61410331 61410450 -78906315 + FLAM_A SINE Alu 6 120 -22 6424 241 33 12 chr10 61410576 61411870 -78904895 + L1ME LINE L1 2262 3599 -2965 1975 113 88 0 chr10 61411870 61412153 -78904612 + AluSx SINE Alu 1 308 -4 6424 241 33 12 chr10 61412153 61413004 -78903761 + L1ME LINE L1 3599 4430 -2134 336 172 62 16 chr10 61413004 61413068 -78903697 + FLAM_A SINE Alu 32 98 -35 1956 159 14 14 chr10 61413068 61413438 -78903327 + L1MC2 LINE L1 5972 6341 -3 279 0 0 0 chr10 61413477 61413508 -78903257 + (TG)n Simple_repeat Simple_repeat 2 32 0 250 349 60 0 chr10 61413520 61413603 -78903162 + L2 LINE L2 3156 3243 -29 1748 160 0 7 chr10 61414815 61415084 -78901681 - AluJb SINE Alu -45 267 1 325 224 82 87 chr10 61415385 61415604 -78901161 + L1ME LINE L1 5850 6067 -472 322 223 170 27 chr10 61415826 61415938 -78900827 - MIR SINE MIR -21 241 114 980 215 20 119 chr10 61416092 61416488 -78900277 - MER57A LTR ERV1 -5 398 42 627 290 68 42 chr10 61417470 61417997 -78898768 - L1MC/D LINE L1 -2011 5797 5257 563 212 89 0 chr10 61418512 61418658 -78898107 - MIR SINE MIR -29 233 75 291 109 0 0 chr10 61418739 61418785 -78897980 - MADE1 DNA Mariner 0 80 35 1801 169 0 23 chr10 61418877 61419179 -78897586 - AluJb SINE Alu -15 297 3 231 293 37 12 chr10 61419748 61419830 -78896935 - L2 LINE L2 -529 2785 2702 901 168 11 38 chr10 61420558 61420743 -78896022 + FRAM SINE Alu 1 173 -3 2654 144 27 7 chr10 61420869 61421279 -78895486 + MSTB LTR MaLR 2 419 -7 191 210 97 32 chr10 61421408 61421470 -78895295 - MIR SINE MIR -73 189 124 628 200 148 38 chr10 61422104 61422197 -78894568 + MLT1D LTR MaLR 216 297 -208 2764 26 0 0 chr10 61422197 61422505 -78894260 + AluY SINE Alu 1 308 -3 628 200 148 38 chr10 61422505 61422608 -78894157 + MLT1D LTR MaLR 297 458 -47 282 333 48 24 chr10 61423615 61423825 -78892940 - L1ME LINE L1 -461 5701 5487 339 356 144 10 chr10 61424701 61424909 -78891856 - MIR SINE MIR -7 255 20 787 157 42 6 chr10 61424931 61425097 -78891668 + L1MB7 LINE L1 6013 6184 0 707 227 90 37 chr10 61425330 61425753 -78891012 + L1ME2 LINE L1 5587 6050 -114 333 108 27 27 chr10 61425772 61425846 -78890919 + L1MA10 LINE L1 6251 6324 -10 254 280 136 34 chr10 61425984 61426102 -78890663 - L3b LINE CR1 -203 1380 1251 324 184 46 81 chr10 61426266 61426353 -78890412 - MER63 DNA MER1_type -260 800 717 486 342 27 5 chr10 61426762 61426949 -78889816 - MIR3 SINE MIR -9 199 9 193 286 12 83 chr10 61426997 61427081 -78889684 + MIR SINE MIR 105 182 -80 932 173 14 72 chr10 61428327 61428535 -78888230 - AluJb SINE Alu -19 293 98 426 179 0 0 chr10 61428683 61428750 -78888015 - AluJ/FLAM SINE Alu -242 70 4 184 29 29 29 chr10 61430980 61431014 -78885751 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 376 262 74 90 chr10 61431268 61431524 -78885241 + L1M2 LINE L1 695 946 -5903 29 28 0 0 chr10 61431811 61431847 -78884918 + GC_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 61432054 61432078 -78884687 + AT_rich Low_complexity Low_complexity 1 24 0 1027 209 142 53 chr10 61432509 61432982 -78883783 - MER113 DNA MER1_type? -3 518 4 443 265 157 18 chr10 61433106 61433272 -78883493 - MIR SINE MIR -6 256 68 361 356 30 42 chr10 61433994 61434325 -78882440 + L2 LINE L2 1683 2009 -1305 196 308 143 15 chr10 61434325 61434458 -78882307 + L2 LINE L2 2131 2280 -1034 182 275 0 0 chr10 61434680 61434720 -78882045 - MIR SINE MIR -2 260 221 250 262 87 120 chr10 61434740 61435195 -78881570 + L2 LINE L2 2594 3046 -226 491 234 70 6 chr10 61435332 61435537 -78881228 + MER46C DNA MER2_type 96 337 -1 219 342 47 77 chr10 61435726 61435960 -78880805 + L2 LINE L2 3040 3266 -6 327 137 0 0 chr10 61436116 61436165 -78880600 - AluJo SINE Alu -35 267 226 940 212 0 11 chr10 61436165 61436349 -78880416 - AluJo SINE Alu -126 186 5 221 282 21 54 chr10 61436427 61436528 -78880237 - MIR SINE MIR -51 157 63 936 168 84 0 chr10 61436829 61436984 -78879781 - MER21B LTR ERV1 -368 495 328 549 283 75 0 chr10 61437111 61437298 -78879467 + MER113 DNA MER1_type? 293 493 -28 181 280 65 56 chr10 61437768 61437875 -78878890 + L2 LINE L2 2643 2750 -564 1596 155 34 44 chr10 61438867 61439163 -78877602 + AluJb SINE Alu 1 293 -19 256 239 30 0 chr10 61439945 61440012 -78876753 + MER91B DNA MER1_type 55 123 -67 287 266 0 64 chr10 61440042 61440136 -78876629 + MER91B DNA MER1_type 102 189 -1 480 309 0 8 chr10 61440150 61440276 -78876489 + L2 LINE L2 3148 3272 0 811 231 131 5 chr10 61440659 61440858 -78875907 - MER58A DNA MER1_type 0 224 1 255 316 77 0 chr10 61440926 61441043 -78875722 - MIR SINE MIR -65 197 72 914 279 89 46 chr10 61441090 61441774 -78874991 + L2 LINE L2 2593 3300 -13 455 299 15 30 chr10 61442511 61442645 -78874120 + MIR3 SINE MIR 76 207 -1 23 0 0 0 chr10 61442730 61442753 -78874012 + AT_rich Low_complexity Low_complexity 1 23 0 313 317 161 6 chr10 61443001 61443162 -78873603 + MIR3 SINE MIR 4 189 -19 1105 178 115 14 chr10 61443372 61443658 -78873107 + MER69 DNA AcHobo 1919 2233 -293 245 260 0 20 chr10 61444577 61444627 -78872138 - L2 LINE L2 -23 3249 3201 329 361 110 18 chr10 61444644 61444871 -78871894 + MIR SINE MIR 1 248 -14 1668 205 64 60 chr10 61445519 61446022 -78870743 - MLT1D LTR MaLR 0 505 1 316 305 128 49 chr10 61446149 61446313 -78870452 - MIR3 SINE MIR -14 194 18 735 207 81 0 chr10 61446714 61446888 -78869877 + MER5A DNA MER1_type 1 188 -1 26 0 0 0 chr10 61447244 61447270 -78869495 + AT_rich Low_complexity Low_complexity 1 26 0 788 157 54 20 chr10 61447586 61447733 -78869032 + MER20 DNA MER1_type 1 152 -67 6045 146 27 6 chr10 61447774 61448727 -78868038 + L1MA6 LINE L1 5148 6133 -167 2227 93 3 19 chr10 61448727 61449037 -78867728 + AluSx SINE Alu 7 311 -1 6045 146 27 6 chr10 61449037 61449209 -78867556 + L1MA6 LINE L1 6133 6300 0 691 153 9 0 chr10 61449226 61449337 -78867428 + FRAM SINE Alu 20 131 -45 302 204 0 0 chr10 61449359 61449413 -78867352 + MER20 DNA MER1_type 166 219 0 1509 219 58 0 chr10 61449499 61449842 -78866923 - MER47A DNA MER2_type 0 366 4 2287 60 14 0 chr10 61450895 61451179 -78865586 - AluY SINE Alu -23 288 1 206 329 37 106 chr10 61451842 61452164 -78864601 + L2 LINE L2 2956 3255 -17 229 323 62 0 chr10 61452397 61452493 -78864272 - L2 LINE L2 0 3272 3171 606 294 72 13 chr10 61452548 61452783 -78863982 + MIR SINE MIR 3 251 -11 497 261 61 39 chr10 61453368 61453598 -78863167 - L1MC4a LINE L1 -1756 6052 5818 442 304 165 49 chr10 61454621 61455026 -78861739 - L2 LINE L2 -785 2529 2050 1777 176 0 6 chr10 61455026 61455339 -78861426 + AluSx SINE Alu 1 311 -1 442 304 165 49 chr10 61455339 61455447 -78861318 - L2 LINE L2 -1264 2050 1956 318 106 0 0 chr10 61455462 61455509 -78861256 + (TA)n Simple_repeat Simple_repeat 2 48 0 487 198 0 0 chr10 61455784 61455875 -78860890 - L1MA4A LINE L1 -24 6279 6189 420 149 188 26 chr10 61455880 61456034 -78860731 - L1MA4A LINE L1 -182 6121 5943 256 267 109 59 chr10 61456045 61456146 -78860619 - L2 LINE L2 -15 3298 3193 486 318 54 65 chr10 61456647 61457063 -78859702 + HAL1 LINE L1 1074 1486 -1021 1776 118 34 37 chr10 61457063 61457360 -78859405 + AluSx SINE Alu 7 302 -10 486 318 54 65 chr10 61457360 61457390 -78859375 + HAL1 LINE L1 1486 1515 -992 2047 216 28 43 chr10 61457583 61457746 -78859019 - MLT1D LTR MaLR -3 502 338 1823 144 48 36 chr10 61457746 61458079 -78858686 - MER1B DNA MER1_type 0 337 1 2047 216 28 43 chr10 61458079 61458425 -78858340 - MLT1D LTR MaLR -167 338 1 23 0 0 0 chr10 61458474 61458497 -78858268 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 56 0 chr10 61458611 61458682 -78858083 + L1MEc LINE L1 2240 2314 -4082 644 182 70 33 chr10 61458702 61458916 -78857849 - HsTC2b DNA Tc2 0 920 699 753 143 0 8 chr10 61458919 61459038 -78857727 + FLAM_C SINE Alu 1 118 -25 1352 248 84 11 chr10 61459064 61459443 -78857322 - HsTC2b DNA Tc2 -207 711 305 675 253 6 28 chr10 61459443 61459625 -78857140 - HsTC2b DNA Tc2 -734 181 4 410 303 37 10 chr10 61459671 61459740 -78857025 + L1MEc LINE L1 2342 2408 -3807 1130 172 74 77 chr10 61459740 61459944 -78856821 + MER33 DNA MER1_type 1 205 -2380 2026 118 7 11 chr10 61459944 61460231 -78856534 + AluSx SINE Alu 1 286 -26 1130 172 74 77 chr10 61460231 61460351 -78856414 + MER33 DNA MER1_type 205 324 0 410 303 37 10 chr10 61460351 61460575 -78856190 + L1MEc LINE L1 2408 2643 -3572 252 154 77 44 chr10 61460745 61460836 -78855929 + L1MEc LINE L1 2920 3013 -3202 2809 216 64 65 chr10 61460845 61461260 -78855505 + L1MEc LINE L1 38 452 -5944 1472 199 188 38 chr10 61461260 61461670 -78855095 + MLT2B1 LTR ERVL 1 487 -33 315 49 0 0 chr10 61461670 61461711 -78855054 + (CA)n Simple_repeat Simple_repeat 2 42 0 1472 199 188 38 chr10 61461711 61461752 -78855013 + MLT2B1 LTR ERVL 487 520 0 2809 216 64 65 chr10 61461752 61462271 -78854494 + L1MEc LINE L1 452 971 -5425 242 289 0 10 chr10 61462377 61462481 -78854284 + L1MEc LINE L1 3182 3284 -2931 1106 133 0 0 chr10 61462490 61462640 -78854125 + AluSg/x SINE Alu 139 288 -24 253 305 66 5 chr10 61462663 61462860 -78853905 + L1MEc LINE L1 3280 3488 -2727 357 217 200 0 chr10 61462885 61463005 -78853760 - MLT1F1 LTR MaLR -205 362 219 286 228 0 0 chr10 61463008 61463065 -78853700 - MLT1F1 LTR MaLR -492 75 19 23 42 0 21 chr10 61463079 61463098 -78853667 + AT_rich Low_complexity Low_complexity 1 19 -28 1996 152 0 7 chr10 61463098 61463395 -78853370 - AluJb SINE Alu -17 295 1 23 42 0 21 chr10 61463395 61463423 -78853342 + AT_rich Low_complexity Low_complexity 19 47 0 416 247 155 37 chr10 61463448 61463945 -78852820 + L1MC4 LINE L1 7261 7896 -146 313 130 9 61 chr10 61463951 61464066 -78852699 + (GAA)n Simple_repeat Simple_repeat 2 110 0 255 198 89 20 chr10 61464068 61464169 -78852596 + L1MC4 LINE L1 7918 8025 -17 2084 93 0 0 chr10 61464177 61464446 -78852319 + AluY SINE Alu 32 300 -11 27 49 0 0 chr10 61464670 61464711 -78852054 + AT_rich Low_complexity Low_complexity 1 41 0 24 67 0 0 chr10 61465108 61465153 -78851612 + AT_rich Low_complexity Low_complexity 1 45 0 544 289 87 25 chr10 61465213 61465455 -78851310 + MIR SINE MIR 6 262 0 287 233 29 68 chr10 61465629 61465732 -78851033 + MIR3 SINE MIR 110 208 0 1899 145 14 0 chr10 61465822 61466104 -78850661 - AluSx SINE Alu -26 286 1 688 113 0 16 chr10 61466400 61466524 -78850241 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 261 279 43 29 chr10 61466848 61466988 -78849777 - L1ME LINE L1 -337 5784 5643 387 0 0 0 chr10 61467626 61467669 -78849096 + (CA)n Simple_repeat Simple_repeat 2 44 0 189 338 41 82 chr10 61467738 61468031 -78848734 + L2 LINE L2 2620 2900 -414 232 318 15 61 chr10 61468140 61468272 -78848493 + L2 LINE L2 2837 2962 -310 515 245 90 56 chr10 61468488 61468721 -78848044 - MIR SINE MIR -12 250 10 247 310 117 35 chr10 61468878 61469023 -78847742 + L2 LINE L2 3109 3265 -7 187 316 144 29 chr10 61469147 61469190 -78847575 + L2 LINE L2 3154 3191 -122 491 78 0 33 chr10 61469190 61469280 -78847485 + L1PB1 LINE L1 6064 6150 -1 187 316 144 29 chr10 61469280 61469375 -78847390 + L2 LINE L2 3191 3308 -5 1077 250 104 4 chr10 61469984 61470243 -78846522 + MER69B DNA AcHobo 1 285 -941 1685 161 113 3 chr10 61470243 61470572 -78846193 + MLT1A1 LTR MaLR 1 365 0 1415 205 117 145 chr10 61470572 61470809 -78845956 + MER69B DNA AcHobo 281 523 -2003 1621 159 10 42 chr10 61470809 61471098 -78845667 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr10 61471101 61471121 -78845644 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1415 205 117 145 chr10 61471121 61471800 -78844965 + MER69B DNA AcHobo 525 1175 -1351 1327 178 40 130 chr10 61471800 61472199 -78844566 - MLT1A1 LTR MaLR -2 363 1 1415 205 117 145 chr10 61472199 61472250 -78844515 + MER69B DNA AcHobo 1175 1226 0 223 279 36 63 chr10 61472787 61472898 -78843867 + L2 LINE L2 2946 3053 -219 828 130 14 34 chr10 61473441 61473587 -78843178 - FLAM_C SINE Alu 0 143 1 216 97 0 0 chr10 61473635 61473666 -78843099 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2162 93 0 0 chr10 61473806 61474109 -78842656 - AluSc SINE Alu 0 303 1 1522 175 49 30 chr10 61474165 61474530 -78842235 - MLT1A2 LTR MaLR 0 374 3 786 166 7 0 chr10 61475910 61476100 -78840665 + FLAM_C SINE Alu 1 191 0 620 157 35 0 chr10 61476250 61476365 -78840400 + FLAM_A SINE Alu 1 119 -14 45 69 0 0 chr10 61476402 61476489 -78840276 + AT_rich Low_complexity Low_complexity 1 87 0 271 316 42 0 chr10 61478581 61478676 -78838089 - MIR SINE MIR -5 257 159 21 0 0 0 chr10 61478844 61478865 -78837900 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 61479617 61479644 -78837121 + AT_rich Low_complexity Low_complexity 1 27 0 269 263 13 0 chr10 61479967 61480043 -78836722 + MIR SINE MIR 74 150 -112 295 293 30 20 chr10 61480374 61480473 -78836292 + L2 LINE L2 3154 3253 -19 255 294 15 0 chr10 61481084 61481152 -78835613 + L2 LINE L2 3240 3308 -5 1815 178 0 0 chr10 61482923 61483226 -78833539 + AluJb SINE Alu 3 305 -7 534 269 74 43 chr10 61485024 61485308 -78831457 - L1ME LINE L1 -349 5772 5482 1343 162 155 4 chr10 61485685 61485963 -78830802 + MER47A DNA MER2_type 18 337 -29 904 123 97 0 chr10 61486909 61487063 -78829702 + LTR41 LTR ERVL 1 169 -604 303 197 33 7 chr10 61487118 61487208 -78829557 + LTR50 LTR ERVL 685 792 -3 21 0 0 0 chr10 61487658 61487679 -78829086 + AT_rich Low_complexity Low_complexity 1 21 0 4713 150 52 80 chr10 61487680 61488834 -78827931 - L1MA5 LINE L1 -4 6296 5226 1621 175 7 18 chr10 61488834 61489120 -78827645 - AluJb SINE Alu -29 283 1 4713 150 52 80 chr10 61489120 61489821 -78826944 - L1MA5 LINE L1 -1074 5226 4507 996 177 11 27 chr10 61490014 61490200 -78826565 - AluJb SINE Alu -129 183 1 4628 151 52 14 chr10 61490201 61491156 -78825609 - L1 LINE L1 -1005 5141 4150 833 237 14 32 chr10 61492498 61492717 -78824048 - MER20 DNA MER1_type -3 216 2 455 305 108 0 chr10 61492730 61492897 -78823868 + MIR SINE MIR 47 231 -31 22 80 0 0 chr10 61493759 61493809 -78822956 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr10 61495130 61495158 -78821607 + AT_rich Low_complexity Low_complexity 1 28 0 643 155 112 17 chr10 61496504 61496620 -78820145 + FLAM_C SINE Alu 1 127 -6 690 209 99 6 chr10 61496721 61496893 -78819872 - MER5A DNA MER1_type 0 189 2 200 336 135 0 chr10 61497067 61497171 -78819594 + MIR SINE MIR 4 121 -141 243 304 14 0 chr10 61497460 61497529 -78819236 + L2 LINE L2 3175 3244 -69 394 242 114 26 chr10 61497647 61497822 -78818943 - MIR SINE MIR -54 208 17 2191 114 7 0 chr10 61497915 61498213 -78818552 + AluSx SINE Alu 1 300 -12 902 121 0 8 chr10 61498625 61498749 -78818016 + FLAM_C SINE Alu 1 123 -20 2359 84 13 10 chr10 61499221 61499532 -78817233 - AluSq SINE Alu -1 312 1 27 62 0 0 chr10 61501808 61501856 -78814909 + AT_rich Low_complexity Low_complexity 1 48 0 293 269 60 0 chr10 61502876 61502943 -78813822 - L2 LINE L2 -1 3312 3242 952 155 50 0 chr10 61503153 61503314 -78813451 - MER45A DNA AcHobo 0 178 10 24 53 0 0 chr10 61503802 61503840 -78812925 + AT_rich Low_complexity Low_complexity 1 38 0 506 249 73 19 chr10 61504027 61504254 -78812511 - L1ME3A LINE L1 -306 5864 5681 273 191 149 113 chr10 61504275 61504443 -78812322 + LTR33A LTR ERVL 1 174 -349 333 269 60 7 chr10 61504570 61504719 -78812046 + LTR33A LTR ERVL 351 507 -16 389 275 100 15 chr10 61504746 61505121 -78811644 - L1ME3A LINE L1 -541 5580 5148 1516 153 60 8 chr10 61506563 61506863 -78809902 - AluJo SINE Alu 0 314 1 298 255 31 20 chr10 61507031 61507129 -78809636 - MIR SINE MIR -68 194 96 344 221 25 78 chr10 61508002 61508206 -78808559 + Charlie7 DNA MER1_type 2420 2612 0 1176 120 115 14 chr10 61508883 61509092 -78807673 - MER30 DNA MER1_type 0 230 1 782 244 124 49 chr10 61509711 61509782 -78806983 - MLT1J1 LTR MaLR -3 443 379 2324 104 0 0 chr10 61509782 61510091 -78806674 - AluSg SINE Alu -1 309 1 782 244 124 49 chr10 61510091 61510429 -78806336 - MLT1J1 LTR MaLR -67 379 3 195 42 0 0 chr10 61511230 61511254 -78805511 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 404 252 84 15 chr10 61511324 61511455 -78805310 + MER5B DNA MER1_type 38 177 -1 397 315 24 16 chr10 61511636 61511763 -78805002 + MIR SINE MIR 57 184 -78 2377 101 0 0 chr10 61512228 61512536 -78804229 - AluSg SINE Alu -2 308 1 1319 265 74 20 chr10 61512639 61513306 -78803459 - L1MC4a LINE L1 -743 5403 5186 47 19 0 0 chr10 61513383 61513437 -78803328 + AT_rich Low_complexity Low_complexity 1 54 0 26 0 0 0 chr10 61513577 61513603 -78803162 + AT_rich Low_complexity Low_complexity 1 26 0 890 156 14 0 chr10 61513603 61513744 -78803021 - AluSg/x SINE Alu -22 290 148 2304 112 3 6 chr10 61513933 61514246 -78802519 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 61514246 61514269 -78802496 + AT_rich Low_complexity Low_complexity 1 23 0 2090 112 14 0 chr10 61514269 61514567 -78802198 + AluSx SINE Alu 1 302 0 441 313 71 80 chr10 61514570 61514934 -78801831 - L1MC4a LINE L1 -1215 4931 4571 308 278 206 8 chr10 61515332 61515519 -78801246 + MIR SINE MIR 16 246 -16 259 248 92 0 chr10 61516114 61516223 -78800542 - L1ME4a LINE L1 -205 5916 5798 24 0 0 0 chr10 61516908 61516932 -78799833 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr10 61517765 61517785 -78798980 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 527 213 50 44 chr10 61518299 61518459 -78798306 - MER103 DNA DNA -2 164 4 288 196 56 112 chr10 61518782 61518925 -78797840 - L1ME3A LINE L1 -66 6104 5970 607 314 86 0 chr10 61519107 61519317 -78797448 + MIR SINE MIR 29 256 -6 298 286 123 29 chr10 61519918 61520089 -78796676 - L2 LINE L2 -19 3294 3108 293 341 76 16 chr10 61520275 61520406 -78796359 + MIR3 SINE MIR 40 178 -30 920 217 96 25 chr10 61521244 61521564 -78795201 - L1MD3 LINE L1 -3 8039 7709 22 0 0 0 chr10 61521643 61521665 -78795100 + AT_rich Low_complexity Low_complexity 1 22 0 1351 171 68 0 chr10 61521679 61521971 -78794794 - L1MC4 LINE L1 -381 7661 7350 5926 186 42 17 chr10 61522017 61523424 -78793341 - Charlie1a DNA MER1_type -4 1451 10 969 201 30 4 chr10 61523649 61523917 -78792848 + MER33 DNA MER1_type 47 321 -3 1990 147 7 0 chr10 61524241 61524540 -78792225 - AluSx SINE Alu -11 301 1 399 309 0 40 chr10 61525426 61525552 -78791213 + L2 LINE L2 3169 3289 -24 2046 176 48 128 chr10 61525760 61526515 -78790250 + LTR8A LTR ERV1 34 727 0 434 274 65 89 chr10 61526582 61526830 -78789935 - MIR SINE MIR -1 261 20 1030 256 31 0 chr10 61527129 61527356 -78789409 - MIR SINE MIR -27 235 2 446 227 10 70 chr10 61527495 61527668 -78789097 - L1MC4a LINE L1 -493 5809 5685 34 42 0 0 chr10 61527679 61527727 -78789038 + AT_rich Low_complexity Low_complexity 1 48 0 589 318 18 0 chr10 61527740 61527960 -78788805 - L1MC4a LINE L1 -2104 5704 5481 2034 112 13 1 chr10 61528502 61529244 -78787521 + L1MA5 LINE L1 5362 6295 -5 2421 53 0 17 chr10 61529739 61530040 -78786725 + AluY SINE Alu 1 296 -15 1873 102 68 0 chr10 61530048 61530367 -78786398 + AluSx SINE Alu 2 338 0 432 235 37 42 chr10 61531407 61531624 -78785141 - L1ME4a LINE L1 -208 5913 5698 198 0 0 0 chr10 61531853 61531875 -78784890 + (TCCCC)n Simple_repeat Simple_repeat 2 23 0 465 66 0 0 chr10 61531876 61531937 -78784828 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 898 156 39 7 chr10 61532043 61532197 -78784568 + FRAM SINE Alu 2 160 -6 309 230 90 10 chr10 61532263 61532363 -78784402 + L1ME4a LINE L1 5956 6063 -58 2847 121 0 36 chr10 61532984 61533424 -78783341 - MSTC LTR MaLR -4 424 1 26 30 0 0 chr10 61533561 61533594 -78783171 + AT_rich Low_complexity Low_complexity 1 33 0 282 329 59 0 chr10 61533656 61533741 -78783024 - L2 LINE L2 -17 3255 3166 3099 168 24 6 chr10 61534025 61534657 -78782108 + L1P LINE L1 4689 5331 -815 573 232 188 51 chr10 61534813 61535089 -78781676 + L2 LINE L2 2999 3312 -1 242 305 72 36 chr10 61535100 61535267 -78781498 - MER117 DNA MER1_type -24 173 1 484 205 8 8 chr10 61536473 61536600 -78780165 + CT-rich Low_complexity Low_complexity 3 129 0 2045 157 3 0 chr10 61536607 61536919 -78779846 - AluSq SINE Alu 0 313 1 200 214 18 0 chr10 61536938 61536994 -78779771 + CT-rich Low_complexity Low_complexity 2 58 0 356 169 23 54 chr10 61537042 61537222 -78779543 + (GGGTG)n Simple_repeat Simple_repeat 1 174 0 185 59 20 59 chr10 61537285 61537336 -78779429 + (CGGGG)n Simple_repeat Simple_repeat 4 52 0 1992 230 56 30 chr10 61537483 61538218 -78778547 + Zaphod DNA AcHobo 191 944 -3087 932 226 118 23 chr10 61538254 61538644 -78778121 + Zaphod DNA AcHobo 3605 4031 0 296 312 50 14 chr10 61538678 61538819 -78777946 - MLT1K LTR MaLR -333 255 110 1800 199 91 53 chr10 61538849 61539433 -78777332 - MER69 DNA AcHobo 0 2526 1921 978 240 27 20 chr10 61539450 61539742 -78777023 - MER69 DNA AcHobo -814 412 119 228 173 39 19 chr10 61540204 61540256 -78776509 - MER103 DNA DNA -58 108 56 1682 162 20 20 chr10 61540259 61540437 -78776328 - AluJb SINE Alu -15 297 117 198 0 0 0 chr10 61540437 61540459 -78776306 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1682 162 20 20 chr10 61540459 61540577 -78776188 - AluJb SINE Alu -194 118 1 217 274 83 0 chr10 61540587 61540671 -78776094 - MIR SINE MIR -15 247 157 301 391 0 0 chr10 61540911 61541090 -78775675 + C-rich Low_complexity Low_complexity 1 179 0 275 200 21 42 chr10 61541119 61541214 -78775551 + (CCCCG)n Simple_repeat Simple_repeat 1 93 0 232 222 19 0 chr10 61541253 61541361 -78775404 + C-rich Low_complexity Low_complexity 3 112 0 1788 104 0 6 chr10 61541625 61541979 -78774786 + L1PA15 LINE L1 5609 6157 -8 192 330 55 117 chr10 61542230 61542278 -78774487 - L2 LINE L2 -213 3059 3010 2661 171 52 8 chr10 61542278 61542811 -78773954 - L1MB8 LINE L1 0 6178 5622 192 330 55 117 chr10 61542811 61543035 -78773730 - L2 LINE L2 -262 3010 2804 207 298 106 0 chr10 61544120 61544224 -78772541 - L2 LINE L2 -39 3274 3160 4684 119 22 14 chr10 61544314 61544763 -78772002 - Tigger3(Golem) DNA MER2_type -4 3024 2565 2159 85 43 0 chr10 61544763 61545044 -78771721 + AluSq SINE Alu 1 293 -20 4684 119 22 14 chr10 61545044 61545336 -78771429 - Tigger3(Golem) DNA MER2_type -463 2565 2277 590 152 38 9 chr10 61545327 61545432 -78771333 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 1057 151 74 25 chr10 61545508 61545793 -78770972 - AluSx SINE Alu 0 302 4 749 259 61 0 chr10 61546466 61546663 -78770102 - MER63A DNA MER1_type 0 210 2 204 338 88 47 chr10 61547032 61547180 -78769585 + L2 LINE L2 3112 3265 -7 197 221 23 93 chr10 61547574 61547660 -78769105 - MIR SINE MIR -70 192 113 957 188 54 0 chr10 61548553 61548739 -78768026 - MER3 DNA MER1_type -5 204 9 362 268 16 16 chr10 61549669 61549796 -78766969 + MARNA DNA Mariner 211 337 -249 241 214 71 43 chr10 61549886 61549956 -78766809 - MARNA DNA Mariner -471 115 44 197 113 38 75 chr10 61550170 61550223 -78766542 - L2 LINE L2 0 3313 3263 2075 198 58 2 chr10 61551122 61551557 -78765208 - MLT1C LTR MaLR -8 459 1 773 156 0 8 chr10 61552065 61552187 -78764578 + AluJo SINE Alu 14 134 -178 231 290 54 11 chr10 61552266 61552359 -78764406 - MER5A DNA MER1_type -21 168 72 501 260 104 0 chr10 61552582 61552755 -78764010 + MIR SINE MIR 63 253 -9 271 266 0 0 chr10 61553726 61553790 -78762975 + L2 LINE L2 3207 3270 -2 416 266 138 28 chr10 61553835 61554189 -78762576 + L1ME4a LINE L1 5712 6104 -17 559 141 10 0 chr10 61555084 61555183 -78761582 - MER5A DNA MER1_type -83 106 7 347 305 201 0 chr10 61555744 61555898 -78760867 + MER5A DNA MER1_type 4 188 -1 254 214 0 0 chr10 61555975 61556031 -78760734 - MIR SINE MIR -25 237 182 2122 124 0 0 chr10 61557644 61557927 -78758838 - AluSx SINE Alu -20 292 10 407 274 140 11 chr10 61558160 61558339 -78758426 + LTR16A1 LTR ERVL 246 447 -10 253 280 28 28 chr10 61558340 61558447 -78758318 + MIR SINE MIR 156 262 0 2022 143 7 0 chr10 61558786 61559094 -78757671 - AluSx SINE Alu -2 310 1 504 136 48 10 chr10 61559444 61559547 -78757218 - L1MA9 LINE L1 -8 6304 6198 196 255 21 0 chr10 61559892 61559939 -78756826 - MER5A DNA MER1_type -71 118 71 2241 122 0 0 chr10 61559942 61560238 -78756527 - AluSx SINE Alu -16 296 1 27 0 0 0 chr10 61560886 61560913 -78755852 + AT_rich Low_complexity Low_complexity 1 27 0 248 303 113 28 chr10 61561137 61561279 -78755486 - MIR SINE MIR -12 250 97 192 77 0 0 chr10 61562160 61562186 -78754579 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 479 26 52 0 chr10 61562360 61562437 -78754328 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 294 319 108 24 chr10 61565794 61566007 -78750758 - MIR SINE MIR -14 248 18 804 250 57 22 chr10 61567153 61567381 -78749384 - MIR SINE MIR -12 250 15 251 263 74 21 chr10 61567506 61567601 -78749164 + L2 LINE L2 3210 3309 -4 401 262 14 28 chr10 61569244 61569385 -78747380 - MIR SINE MIR -122 140 2 1758 129 45 39 chr10 61569498 61569808 -78746957 - AluJo SINE Alu 0 312 1 192 200 0 0 chr10 61569944 61569994 -78746771 + (CA)n Simple_repeat Simple_repeat 1 50 0 1829 173 24 24 chr10 61570001 61570342 -78746423 - MER2 DNA MER2_type -1 343 3 234 0 0 0 chr10 61570342 61570368 -78746397 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 597 49 0 0 chr10 61570367 61570448 -78746317 + (GA)n Simple_repeat Simple_repeat 1 81 0 2160 113 57 25 chr10 61571121 61571474 -78745291 + THE1B LTR MaLR 1 364 0 336 295 22 29 chr10 61571690 61571829 -78744936 + MIR3 SINE MIR 41 178 -30 424 287 79 0 chr10 61573054 61573218 -78743547 - MIR SINE MIR 0 262 86 401 218 135 13 chr10 61573917 61574073 -78742692 - MIR SINE MIR -46 216 42 2150 164 18 20 chr10 61574683 61575074 -78741691 + L1MA7 LINE L1 5674 6063 -228 889 182 0 0 chr10 61575078 61575226 -78741539 - FRAM SINE Alu -7 169 22 1401 116 30 13 chr10 61575257 61575489 -78741276 + L1MA6 LINE L1 6065 6300 0 315 280 76 8 chr10 61575743 61575861 -78740904 - MIR3 SINE MIR -36 172 47 509 217 0 94 chr10 61576865 61577003 -78739762 - FLAM_A SINE Alu -8 125 1 439 319 28 16 chr10 61577054 61577305 -78739460 - L1MC4 LINE L1 -169 7873 7620 815 246 52 20 chr10 61578045 61578293 -78738472 + MIR SINE MIR 7 262 0 861 217 32 14 chr10 61579546 61579827 -78736938 - L1M4 LINE L1 -1674 4472 4187 473 280 21 47 chr10 61579877 61580070 -78736695 + MIR SINE MIR 74 261 -1 361 252 117 9 chr10 61580155 61580266 -78736499 - MIR SINE MIR -56 206 84 185 382 45 9 chr10 61580408 61580628 -78736137 + L2 LINE L2 2578 2805 -509 1923 157 0 22 chr10 61581510 61581823 -78734942 - AluJb SINE Alu -6 306 1 2503 111 22 16 chr10 61581966 61582337 -78734428 + THE1C LTR MaLR 3 375 0 821 85 0 0 chr10 61584702 61584808 -78731957 - AluSp SINE Alu -207 106 1 316 221 49 33 chr10 61586706 61586898 -78729867 + (CCCCG)n Simple_repeat Simple_repeat 1 195 0 866 221 15 5 chr10 61587183 61587382 -78729383 + MIR SINE MIR 15 215 -47 2598 178 10 59 chr10 61587556 61588079 -78728686 - MLT1D LTR MaLR -8 497 1 218 324 162 9 chr10 61588232 61588343 -78728422 - MIR SINE MIR -118 144 17 596 261 43 49 chr10 61589198 61589382 -78727383 + MER63A DNA MER1_type 28 210 0 238 288 110 48 chr10 61589686 61589832 -78726933 - MER5A DNA MER1_type -24 165 11 238 232 85 12 chr10 61591757 61591839 -78724926 + MIR SINE MIR 46 133 -75 196 295 90 0 chr10 61591886 61591985 -78724780 + MIR SINE MIR 52 160 -48 1489 93 40 22 chr10 61592675 61592900 -78723865 + MER30 DNA MER1_type 1 229 -1 1283 213 78 31 chr10 61592961 61593318 -78723447 + MLT1A2 LTR MaLR 1 374 0 348 224 56 28 chr10 61594321 61594428 -78722337 - MIR SINE MIR -119 143 34 702 192 20 40 chr10 61594512 61594534 -78722231 - MLT1G1 LTR MaLR 0 590 569 2676 128 9 53 chr10 61594534 61594986 -78721779 - MSTB1 LTR MaLR 0 432 1 702 192 20 40 chr10 61594986 61595114 -78721651 - MLT1G1 LTR MaLR -21 569 443 * 1494 268 11 27 chr10 61595110 61595495 -78721270 - MLT1G1 LTR MaLR -194 401 23 2353 93 0 0 chr10 61595528 61595829 -78720936 - AluY SINE Alu -10 301 1 2291 105 0 0 chr10 61596352 61596648 -78720117 + AluSx SINE Alu 1 296 -16 259 226 59 59 chr10 61596847 61596949 -78719816 + L2 LINE L2 2845 2946 -326 305 257 29 0 chr10 61596997 61597067 -78719698 + MLT1G3 LTR MaLR 203 274 -256 290 130 65 0 chr10 61597063 61597109 -78719656 + MLT1G3 LTR MaLR 415 463 -127 * 2256 87 7 3 chr10 61597390 61597679 -78719086 - AluSg SINE Alu -20 290 1 362 43 0 0 chr10 61598608 61598654 -78718111 - MADE1 DNA Mariner -34 46 1 1039 259 162 44 chr10 61599326 61600114 -78716651 - L2 LINE L2 -2 3311 2436 244 333 74 53 chr10 61600129 61600318 -78716447 + L2 LINE L2 3075 3267 -5 202 310 149 0 chr10 61602545 61602632 -78714133 - L2 LINE L2 -4 3309 3210 1482 165 71 11 chr10 61603632 61603922 -78712843 - AluJb SINE Alu 0 306 1 1034 257 20 14 chr10 61603941 61604233 -78712532 - L1ME1 LINE L1 -3 6163 5870 206 324 49 10 chr10 61604309 61604411 -78712354 + MER5A DNA MER1_type 1 106 -83 820 172 82 79 chr10 61604732 61604844 -78711921 - MER96B DNA MER1_type? -1 416 306 2251 114 0 3 chr10 61604844 61605151 -78711614 + AluSg SINE Alu 1 306 -4 820 172 82 79 chr10 61605151 61605305 -78711460 - MER96B DNA MER1_type? -111 306 149 266 250 0 0 chr10 61605303 61605359 -78711406 + MER96B DNA MER1_type? 362 417 0 * 293 348 142 43 chr10 61606164 61606397 -78710368 + MIR SINE MIR 6 261 -1 2670 105 13 35 chr10 61606537 61606909 -78709856 + THE1B LTR MaLR 1 364 0 228 305 17 51 chr10 61607124 61607242 -78709523 + L3b LINE CR1 1117 1230 -353 263 348 122 23 chr10 61607482 61607703 -78709062 + MIR SINE MIR 7 249 -13 23 92 0 0 chr10 61611805 61611870 -78704895 + AT_rich Low_complexity Low_complexity 1 65 0 2890 19 0 0 chr10 61612942 61613364 -78703401 + L1P LINE L1 3517 4124 -2022 238 288 25 12 chr10 61613364 61613444 -78703321 + L2 LINE L2 3162 3242 -71 672 194 61 6 chr10 61613490 61613670 -78703095 - Charlie5 DNA MER1_type -92 2520 2331 867 101 7 50 chr10 61614201 61614340 -78702425 - FLAM_C SINE Alu 0 143 11 272 237 0 0 chr10 61614366 61614425 -78702340 + MER63 DNA MER1_type 969 1027 -35 821 169 0 16 chr10 61615546 61615670 -78701095 - FLAM_A SINE Alu -10 123 2 850 184 26 131 chr10 61616762 61617029 -78699736 + MLT2D LTR ERVL 98 336 -78 1990 142 6 22 chr10 61617036 61617347 -78699418 - AluSx SINE Alu -6 306 1 28 48 0 0 chr10 61617431 61617473 -78699292 + AT_rich Low_complexity Low_complexity 1 42 0 1430 157 56 56 chr10 61618817 61619122 -78697643 + AluJb SINE Alu 1 305 -7 216 304 57 37 chr10 61619590 61619712 -78697053 + MIR3 SINE MIR 14 135 -102 2386 136 25 3 chr10 61620028 61620388 -78696377 + L1PA16 LINE L1 5790 6157 -9 23 0 0 0 chr10 61620388 61620411 -78696354 + AT_rich Low_complexity Low_complexity 1 23 0 2447 64 6 10 chr10 61620465 61620777 -78695988 + AluY SINE Alu 1 311 0 21 36 0 0 chr10 61621238 61621266 -78695499 + GC_rich Low_complexity Low_complexity 1 28 0 197 365 28 65 chr10 61624907 61625121 -78691644 - MIR SINE MIR 0 262 57 237 173 39 19 chr10 61625175 61625227 -78691538 - MIR SINE MIR -122 140 88 21 0 0 0 chr10 61626772 61626793 -78689972 + AT_rich Low_complexity Low_complexity 1 21 0 223 269 183 0 chr10 61627044 61627137 -78689628 + L2 LINE L2 3163 3272 0 2602 43 0 3 chr10 61627637 61627940 -78688825 - AluY SINE Alu -9 302 1 340 307 204 38 chr10 61628240 61628891 -78687874 + L2 LINE L2 1968 2726 -588 2307 97 0 10 chr10 61629089 61629389 -78687376 - AluSg SINE Alu -13 297 1 2293 93 10 10 chr10 61630582 61630895 -78685870 - AluSp SINE Alu 0 313 1 183 80 0 0 chr10 61631238 61631263 -78685502 + (A)n Simple_repeat Simple_repeat 1 25 0 708 144 0 0 chr10 61632073 61632177 -78684588 - L1PB4 LINE L1 0 6156 6053 1048 231 4 21 chr10 61632480 61632722 -78684043 - L1PB4 LINE L1 -2 6154 5917 436 268 115 27 chr10 61632768 61632951 -78683814 + MIR SINE MIR 63 261 -1 1902 179 0 10 chr10 61632986 61633298 -78683467 - AluJo SINE Alu -3 309 1 342 196 147 10 chr10 61635024 61635126 -78681639 - L1MD3 LINE L1 -10 7985 7870 209 231 77 51 chr10 61635189 61635267 -78681498 - MIR SINE MIR -70 192 113 189 0 0 0 chr10 61635369 61635390 -78681375 + (CA)n Simple_repeat Simple_repeat 2 22 0 1877 143 3 21 chr10 61635661 61635947 -78680818 - AluSx SINE Alu -31 281 1 439 102 0 0 chr10 61636283 61636342 -78680423 - U2 snRNA snRNA -129 59 1 322 246 50 121 chr10 61636546 61636745 -78680020 + L3 LINE CR1 1365 1549 -28 709 167 83 39 chr10 61636994 61637174 -78679591 + MER20 DNA MER1_type 32 219 0 718 285 10 1 chr10 61637176 61637367 -78679398 + MIR SINE MIR 40 230 -32 428 311 84 60 chr10 61637826 61638125 -78678640 - MARNA DNA Mariner -198 388 83 288 296 91 51 chr10 61639200 61639453 -78677312 + L2 LINE L2 632 894 -2420 1089 263 79 42 chr10 61639478 61639935 -78676830 + MLT1H LTR MaLR 76 549 0 2101 186 78 43 chr10 61640099 61640583 -78676182 + MLT1D LTR MaLR 1 501 -4 198 103 0 0 chr10 61641161 61641190 -78675575 + (T)n Simple_repeat Simple_repeat 1 29 0 2372 81 0 3 chr10 61641204 61641502 -78675263 - AluSg1 SINE Alu -12 297 1 734 283 170 34 chr10 61643896 61644249 -78672516 - L2 LINE L2 -1 3312 2912 223 245 85 57 chr10 61644433 61644539 -78672226 - L2 LINE L2 -4 3309 3201 216 0 0 0 chr10 61644691 61644715 -78672050 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 386 270 224 11 chr10 61644995 61645169 -78671596 - MIR SINE MIR -21 241 31 549 315 69 0 chr10 61645707 61645923 -78670842 - MIR SINE MIR -9 253 23 410 167 0 22 chr10 61646529 61646619 -78670146 + MER53 DNA DNA 95 182 -7 369 0 0 0 chr10 61646836 61646877 -78669888 + (CA)n Simple_repeat Simple_repeat 2 42 0 604 273 11 22 chr10 61647041 61647224 -78669541 + MER5A DNA MER1_type 4 184 -5 266 309 243 20 chr10 61647675 61647827 -78668938 + MIR3 SINE MIR 13 198 -10 253 218 18 0 chr10 61647823 61647878 -78668887 + MIR3 SINE MIR 106 161 -47 * 341 260 121 121 chr10 61648062 61648466 -78668299 - L2 LINE L2 -2 3311 2908 205 267 99 40 chr10 61648495 61648596 -78668169 - MIR3 SINE MIR -38 170 64 471 323 122 0 chr10 61648658 61648847 -78667918 + MIR SINE MIR 39 250 -12 341 267 104 123 chr10 61651446 61651914 -78664851 + L1M2 LINE L1 662 1389 -5460 21 36 0 0 chr10 61652228 61652256 -78664509 + AT_rich Low_complexity Low_complexity 1 28 0 33275 105 20 13 chr10 61652976 61659071 -78657694 - L1PA6 LINE L1 -11 6143 11 751 242 6 0 chr10 61659115 61659276 -78657489 - FRAM SINE Alu -13 163 2 2179 117 7 3 chr10 61659288 61659597 -78657168 - AluSx SINE Alu -2 310 1 262 322 112 14 chr10 61659603 61659746 -78657019 - L2 LINE L2 0 3272 3116 1631 151 97 4 chr10 61659861 61660140 -78656625 - AluSx SINE Alu -6 306 2 803 302 154 37 chr10 61660149 61660905 -78655860 + L2 LINE L2 2438 3304 -9 1217 186 93 79 chr10 61660925 61661291 -78655474 + MLT1A2 LTR MaLR 4 374 0 23 33 0 0 chr10 61662057 61662087 -78654678 + AT_rich Low_complexity Low_complexity 1 30 0 208 229 208 31 chr10 61663392 61663488 -78653277 - MIR SINE MIR -109 153 41 332 333 62 17 chr10 61663734 61663911 -78652854 - MIR3 SINE MIR 0 208 24 309 271 223 36 chr10 61664220 61664386 -78652379 + MIR SINE MIR 60 256 -6 604 203 176 26 chr10 61665473 61665626 -78651139 - MER5A DNA MER1_type -5 184 9 3836 204 50 2 chr10 61665770 61666652 -78650113 + MER63C DNA MER1_type 1 924 -6 1909 189 71 13 chr10 61666775 61667226 -78649539 - L1ME3A LINE L1 -8 6162 5686 358 314 53 24 chr10 61668169 61668338 -78648427 - L1ME4a LINE L1 -1 6120 5947 419 271 131 49 chr10 61668376 61668544 -78648221 - L1ME4a LINE L1 -236 5885 5732 1962 95 84 0 chr10 61668544 61668818 -78647947 - AluSg SINE Alu -13 297 1 419 271 131 49 chr10 61668818 61668978 -78647787 - L1ME4a LINE L1 -389 5732 5530 21 36 0 0 chr10 61669540 61669568 -78647197 + AT_rich Low_complexity Low_complexity 1 28 0 212 179 0 0 chr10 61669710 61669749 -78647016 + T-rich Low_complexity Low_complexity 1 39 0 612 221 16 0 chr10 61669756 61669883 -78646882 - L1ME3A LINE L1 -12 6158 6030 1916 175 6 0 chr10 61670715 61671080 -78645685 + L1MB7 LINE L1 5797 6163 -21 309 246 104 30 chr10 61671087 61671221 -78645544 - L1ME4a LINE L1 -12 6109 5966 459 309 56 11 chr10 61671858 61672036 -78644729 - MIR SINE MIR -2 260 75 360 256 96 78 chr10 61672145 61672438 -78644327 - L1M4 LINE L1 -3256 2890 2593 11972 167 76 43 chr10 61672955 61673049 -78643716 - L1MA4 LINE L1 -9 6291 6202 1961 131 158 11 chr10 61673049 61673422 -78643343 + MSTA LTR MaLR 1 428 0 11972 167 76 43 chr10 61673422 61674851 -78641914 - L1MA4 LINE L1 -98 6202 4822 826 55 0 0 chr10 61674851 61674960 -78641805 + MLT2A2 LTR ERVL 1 109 -344 11972 167 76 43 chr10 61674960 61676000 -78640765 - L1MA4 LINE L1 -1478 4822 3818 189 0 0 0 chr10 61676000 61676021 -78640744 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1809 147 0 21 chr10 61676023 61676309 -78640456 - AluSx SINE Alu -32 280 1 11972 167 76 43 chr10 61676309 61676940 -78639825 - L1MA4 LINE L1 -2482 3818 3209 2398 166 9 32 chr10 61676940 61677373 -78639392 - MSTB LTR MaLR -2 424 2 11972 167 76 43 chr10 61677373 61677980 -78638785 - L1MA4 LINE L1 -3091 3209 2253 215 254 18 0 chr10 61678170 61678225 -78638540 + CT-rich Low_complexity Low_complexity 2 57 0 1717 159 74 40 chr10 61678289 61678640 -78638125 - THE1B LTR MaLR 0 364 2 24 32 0 0 chr10 61680154 61680185 -78636580 + AT_rich Low_complexity Low_complexity 1 31 0 365 324 74 27 chr10 61680594 61680742 -78636023 - L2 LINE L2 -4 3268 3114 460 280 40 123 chr10 61680809 61681013 -78635752 + L2 LINE L2 2521 2741 -573 2010 132 20 0 chr10 61681013 61681317 -78635448 + AluSq SINE Alu 4 313 0 1711 155 3 24 chr10 61681322 61681618 -78635147 + AluJb SINE Alu 22 311 -1 460 280 40 123 chr10 61681618 61681836 -78634929 + L2 LINE L2 2745 2913 -401 199 289 93 41 chr10 61682137 61682234 -78634531 - L2 LINE L2 -299 2973 2872 2255 113 7 3 chr10 61683212 61683522 -78633243 + AluSp SINE Alu 1 311 -2 208 288 58 58 chr10 61684359 61684498 -78632267 - L2 LINE L2 -212 3060 2922 1123 218 26 33 chr10 61684498 61684805 -78631960 + MLT1A2 LTR MaLR 1 305 -69 2535 171 47 50 chr10 61685081 61685726 -78631039 - L1MD2 LINE L1 -441 5918 5276 225 0 0 0 chr10 61687195 61687220 -78629545 + (T)n Simple_repeat Simple_repeat 1 25 0 272 340 58 27 chr10 61688036 61688224 -78628541 + MIR SINE MIR 19 212 -50 1904 98 0 4 chr10 61689343 61689587 -78627178 + AluSx SINE Alu 38 280 -32 696 289 16 11 chr10 61689914 61690104 -78626661 - MIR SINE MIR 0 262 72 180 77 0 0 chr10 61691587 61691613 -78625152 + (TG)n Simple_repeat Simple_repeat 2 27 0 363 259 67 44 chr10 61691659 61691794 -78624971 + MIR3 SINE MIR 10 147 -61 477 189 270 0 chr10 61692041 61692189 -78624576 - MER53 DNA DNA 0 189 2 2251 123 7 0 chr10 61692563 61692871 -78623894 - AluSg SINE Alu 0 310 1 4671 108 29 23 chr10 61693526 61694311 -78622454 - Tigger3b DNA MER2_type 0 1231 442 2073 170 46 21 chr10 61694583 61695018 -78621747 - Tigger3b DNA MER2_type -785 446 1 313 368 42 0 chr10 61695352 61695496 -78621269 - MIR SINE MIR -110 152 3 1606 207 10 0 chr10 61696137 61696432 -78620333 - AluJb SINE Alu -14 298 1 403 250 137 6 chr10 61696538 61696706 -78620059 + L1M4 LINE L1 3766 3955 -2191 497 270 32 8 chr10 61697168 61697294 -78619471 + MIR3 SINE MIR 28 156 -52 408 258 208 11 chr10 61697309 61697487 -78619278 + MIR SINE MIR 48 260 -2 369 357 16 8 chr10 61698813 61698939 -78617826 + MIR SINE MIR 33 159 -103 238 301 119 51 chr10 61699072 61699248 -78617517 + MIR SINE MIR 25 212 -50 2174 138 3 0 chr10 61699335 61699639 -78617126 - AluSx SINE Alu -7 305 1 221 322 167 11 chr10 61702079 61702259 -78614506 - L3b LINE CR1 -199 1384 1177 208 267 40 27 chr10 61702863 61702938 -78613827 - MIR SINE MIR -66 196 121 312 213 16 0 chr10 61703022 61703083 -78613682 + L2 LINE L2 3252 3313 0 228 86 0 0 chr10 61703170 61703205 -78613560 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 22 0 0 0 chr10 61703518 61703540 -78613225 + AT_rich Low_complexity Low_complexity 1 22 0 908 119 0 15 chr10 61703919 61704053 -78612712 + FLAM_C SINE Alu 1 132 -1 1789 29 0 0 chr10 61704220 61704430 -78612335 - L1PA5 LINE L1 -1 6153 5944 432 265 197 42 chr10 61704430 61704739 -78612026 - L2 LINE L2 -23 3290 2934 1086 144 0 0 chr10 61704817 61704977 -78611788 - AluSg/x SINE Alu -5 307 148 199 303 118 13 chr10 61705991 61706067 -78610698 - L2 LINE L2 -32 3281 3198 906 302 209 50 chr10 61706242 61707172 -78609593 + L3 LINE CR1 334 1411 -166 189 304 0 0 chr10 61707244 61707290 -78609475 + L3b LINE CR1 1538 1583 0 7024 50 11 0 chr10 61708747 61710229 -78606536 + L1PA7 LINE L1 4662 6154 0 182 368 103 26 chr10 61710828 61710945 -78605820 - L3 LINE CR1 -6 1571 1446 304 330 36 77 chr10 61711321 61711515 -78605250 + L3b LINE CR1 1354 1539 -44 22 56 0 0 chr10 61713408 61713444 -78603321 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr10 61713829 61713864 -78602901 + AT_rich Low_complexity Low_complexity 1 35 0 247 191 32 63 chr10 61715073 61715136 -78601629 + MIR SINE MIR 123 183 -79 186 103 0 0 chr10 61715825 61715854 -78600911 + (TTC)n Simple_repeat Simple_repeat 2 30 0 945 302 177 7 chr10 61716684 61717241 -78599524 - L2 LINE L2 -40 3273 2629 590 279 75 0 chr10 61718453 61718614 -78598151 - MIR SINE MIR -75 187 15 2121 122 0 3 chr10 61718871 61719166 -78597599 - AluSq SINE Alu -19 294 1 391 286 61 51 chr10 61719488 61719557 -78597208 - MIR SINE MIR -7 255 188 884 206 47 23 chr10 61719557 61719771 -78596994 - MER20 DNA MER1_type 0 219 1 391 286 61 51 chr10 61719771 61719897 -78596868 - MIR SINE MIR -74 188 58 2630 98 0 10 chr10 61724893 61725282 -78591483 - LTR17 LTR ERV1 -395 385 1 2238 61 0 3 chr10 61725282 61725575 -78591190 - HERV17 LTR ERV1 0 8626 8335 295 51 0 0 chr10 61725565 61725604 -78591161 - HERV17 LTR ERV1 -1078 7548 7510 * 1246 56 0 6 chr10 61725601 61725763 -78591002 - HERV17 LTR ERV1 -1480 7146 6986 * 26928 55 8 0 chr10 61725755 61729202 -78587563 - HERV17 LTR ERV1 -2724 5902 2430 5054 58 6 40 chr10 61729187 61729909 -78586856 - HERV17 LTR ERV1 -6612 2014 1318 * 574 80 0 0 chr10 61729910 61729985 -78586780 - HERV17 LTR ERV1 -8551 75 1 5335 92 35 9 chr10 61729985 61730745 -78586020 - LTR17 LTR ERV1 0 780 1 623 173 0 64 chr10 61730910 61731066 -78585699 + MLT1B LTR MaLR 13 158 -232 1920 102 27 0 chr10 61731066 61731322 -78585443 - AluSg SINE Alu -17 293 31 3921 113 93 89 chr10 61731322 61732690 -78584075 + pTR5 LTR ERV1 743 2437 -1 1099 163 4 75 chr10 61732723 61732975 -78583790 + MLT1B LTR MaLR 155 388 -2 183 218 0 91 chr10 61733707 61733762 -78583003 - L2 LINE L2 -4 3268 3219 2125 178 71 52 chr10 61733911 61734444 -78582321 - MER67A LTR ERV1 0 543 1 738 157 15 22 chr10 61734720 61734854 -78581911 + AluJb SINE Alu 1 133 -179 22 0 0 0 chr10 61734855 61734877 -78581888 + AT_rich Low_complexity Low_complexity 1 22 0 743 178 0 0 chr10 61735072 61735190 -78581575 - AluJb SINE Alu -194 118 1 21 0 0 0 chr10 61735928 61735949 -78580816 + AT_rich Low_complexity Low_complexity 1 21 0 654 138 0 6 chr10 61736443 61736690 -78580075 - AluJb SINE Alu -18 294 1 234 290 0 43 chr10 61736826 61736895 -78579870 - MIR SINE MIR -113 95 30 192 298 0 0 chr10 61738649 61738706 -78578059 - MIR3 SINE MIR -3 205 149 227 309 12 0 chr10 61738823 61738904 -78577861 + MER103 DNA DNA 55 136 -30 262 326 113 7 chr10 61738981 61739122 -78577643 - MIR3 SINE MIR -48 160 5 333 323 10 0 chr10 61739310 61739406 -78577359 + MER81 DNA DNA 16 112 -2 1048 272 110 45 chr10 61739442 61739931 -78576834 + LTR33 LTR ERVL 1 521 0 569 321 91 35 chr10 61740692 61740801 -78575964 - L2 LINE L2 -1 3312 3211 1962 137 0 33 chr10 61740801 61741108 -78575657 + AluJb SINE Alu 9 305 -7 569 321 91 35 chr10 61741108 61741425 -78575340 - L2 LINE L2 -102 3211 2862 541 274 71 20 chr10 61741421 61741618 -78575147 + MIR SINE MIR 36 242 -20 * 543 160 120 0 chr10 61743251 61743351 -78573414 + MER81 DNA DNA 1 112 -2 483 279 82 16 chr10 61743842 61744025 -78572740 + MIR3 SINE MIR 1 195 -13 483 266 60 40 chr10 61744879 61745078 -78571687 - MIR SINE MIR -13 249 47 226 320 65 49 chr10 61745482 61745605 -78571160 + MIR SINE MIR 20 143 -65 486 335 115 31 chr10 61745763 61746023 -78570742 + L2 LINE L2 2903 3184 -129 7649 20 0 0 chr10 61746034 61747277 -78569488 - L1PA2 LINE L1 0 6155 4909 4826 31 0 0 chr10 61747271 61747846 -78568919 + L1P LINE L1 2241 2815 -3331 * 225 318 0 15 chr10 61848002 61848068 -78468697 + L2 LINE L2 2998 3062 -210 938 188 38 0 chr10 61848225 61848385 -78468380 + FRAM SINE Alu 1 166 0 407 243 0 28 chr10 61848404 61848511 -78468254 - Charlie8 DNA MER1_type -2204 213 110 379 188 12 115 chr10 61848551 61848716 -78468049 - AluJb SINE Alu -19 283 165 1991 122 7 10 chr10 61851931 61852219 -78464546 - AluSq SINE Alu -26 287 1 232 331 28 49 chr10 61852220 61852362 -78464403 + MER5A DNA MER1_type 50 188 -1 4465 61 4 0 chr10 61852884 61853518 -78463247 - L1P3 LINE L1 -345 5809 5174 882 225 0 32 chr10 61853612 61853799 -78462966 + AluJo SINE Alu 7 187 -125 465 81 0 0 chr10 61854820 61854882 -78461883 + Alu SINE Alu 236 297 -13 1572 184 118 26 chr10 61854888 61854973 -78461792 + L1ME3 LINE L1 1706 1782 -4644 1641 184 3 17 chr10 61854973 61855272 -78461493 + AluJo SINE Alu 1 295 -17 1572 184 118 26 chr10 61855272 61855598 -78461167 + L1ME3 LINE L1 1782 2102 -4324 1113 116 0 0 chr10 61855598 61855744 -78461021 + AluSg SINE Alu 1 146 -164 1383 200 43 59 chr10 61855746 61855876 -78460889 + L1ME3 LINE L1 2108 2239 -4187 1915 137 50 0 chr10 61855876 61856153 -78460612 - AluSx SINE Alu -21 291 1 1383 200 43 59 chr10 61856153 61856246 -78460519 + L1ME3 LINE L1 2239 2332 -4094 1442 204 16 10 chr10 61856246 61856573 -78460192 + AluJo SINE Alu 1 312 0 1383 200 43 59 chr10 61856573 61856982 -78459783 + L1ME3 LINE L1 2332 2740 -3686 996 262 89 55 chr10 61857007 61857170 -78459595 - MER21B LTR ERV1 -194 669 513 1992 134 0 10 chr10 61857170 61857475 -78459290 + AluSg SINE Alu 1 302 -8 996 262 89 55 chr10 61857475 61857750 -78459015 - MER21B LTR ERV1 -350 513 216 1465 253 118 13 chr10 61857753 61858621 -78458144 + L1ME3 LINE L1 5020 5979 -463 2081 89 0 38 chr10 61858623 61858938 -78457827 + AluY SINE Alu 1 304 0 1303 92 12 0 chr10 61858941 61859114 -78457651 + AluSc SINE Alu 132 306 -3 1432 200 13 30 chr10 61859120 61859420 -78457345 + AluJo SINE Alu 1 295 -17 1305 241 38 24 chr10 61859420 61859843 -78456922 + L1ME3 LINE L1 5976 6404 -38 2441 65 0 0 chr10 61859850 61860143 -78456622 + AluY SINE Alu 1 293 -18 561 153 12 0 chr10 61860175 61860260 -78456505 - FRAM SINE Alu -18 158 73 543 201 16 54 chr10 61860446 61860585 -78456180 + L1MCa LINE L1 1026 1158 -5268 2025 148 6 10 chr10 61860585 61860896 -78455869 + AluSx SINE Alu 1 310 -2 543 201 16 54 chr10 61860896 61860940 -78455825 + L1MCa LINE L1 1158 1202 -5224 1457 207 26 42 chr10 61860961 61861230 -78455535 + L1MCa LINE L1 1151 1423 -5003 2091 113 3 7 chr10 61861230 61861553 -78455212 + AluSg SINE Alu 1 310 0 1457 207 26 42 chr10 61861553 61861705 -78455060 + L1MCa LINE L1 1423 1567 -4859 2280 102 0 3 chr10 61861705 61861999 -78454766 + AluSx SINE Alu 1 293 -19 666 75 0 0 chr10 61862116 61862196 -78454569 - MADE1 DNA Mariner 0 80 1 1004 224 98 75 chr10 61862539 61862937 -78453828 - MLT1I LTR MaLR -2 407 1 389 232 0 0 chr10 61862958 61863027 -78453738 - MER47A DNA MER2_type 0 366 298 2133 133 3 0 chr10 61863032 61863334 -78453431 + AluSx SINE Alu 3 305 -7 2222 113 13 3 chr10 61863355 61863665 -78453100 + AluSq SINE Alu 1 313 0 1198 160 45 139 chr10 61863723 61864031 -78452734 + MSTB1 LTR MaLR 88 355 -77 2100 118 6 13 chr10 61864031 61864346 -78452419 - AluSq SINE Alu 0 313 1 1198 160 45 139 chr10 61864346 61864418 -78452347 + MSTB1 LTR MaLR 355 432 0 * 1808 152 3 3 chr10 61864418 61864700 -78452065 - MER47A DNA MER2_type -84 282 1 446 100 75 75 chr10 61864825 61864905 -78451860 + MADE1 DNA Mariner 1 80 0 717 251 64 21 chr10 61864953 61865238 -78451527 - L1MC/D LINE L1 -318 5803 5521 509 272 42 56 chr10 61865303 61865342 -78451423 - MIR SINE MIR -16 246 208 1266 165 76 22 chr10 61865342 61865566 -78451199 - MER46A DNA MER2_type 0 236 1 509 272 42 56 chr10 61865566 61865711 -78451054 - MIR SINE MIR -54 208 62 2237 158 49 55 chr10 61865711 61866160 -78450605 + MER31B LTR ERV1 1 451 -15 198 0 0 0 chr10 61866160 61866182 -78450583 + (TA)n Simple_repeat Simple_repeat 2 23 0 2463 52 0 0 chr10 61866182 61866469 -78450296 - AluY SINE Alu -24 287 1 2237 158 49 55 chr10 61866469 61866487 -78450278 + MER31B LTR ERV1 449 466 0 509 272 42 56 chr10 61866487 61866514 -78450251 - MIR SINE MIR -200 62 37 931 238 57 9 chr10 61866632 61866859 -78449906 + MIR SINE MIR 4 241 -21 454 302 115 35 chr10 61867238 61867526 -78449239 + L2 LINE L2 3001 3311 -2 194 292 247 0 chr10 61867642 61867731 -78449034 - MIR SINE MIR -61 147 37 194 150 25 0 chr10 61867915 61867955 -78448810 + GA-rich Low_complexity Low_complexity 4 44 0 275 297 86 47 chr10 61868395 61868523 -78448242 - MIR SINE MIR -110 152 20 619 274 30 103 chr10 61868575 61868944 -78447821 - MLT1J LTR MaLR -16 495 154 849 166 133 0 chr10 61869774 61869925 -78446840 - FAM SINE Alu -4 171 1 193 106 21 21 chr10 61869933 61869980 -78446785 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 1969 120 16 26 chr10 61870012 61870321 -78446444 + AluJb SINE Alu 3 308 -4 1901 108 49 28 chr10 61870325 61870662 -78446103 + AluSx SINE Alu 1 312 0 720 297 99 53 chr10 61870963 61871775 -78444990 - L1MC4a LINE L1 -743 5403 4944 2272 81 3 7 chr10 61871775 61872071 -78444694 - AluY SINE Alu -16 295 1 720 297 99 53 chr10 61872071 61872553 -78444212 - L1MC4a LINE L1 -1202 4944 4485 1975 86 71 0 chr10 61873095 61873363 -78443402 + AluSg1 SINE Alu 1 287 -22 193 353 67 8 chr10 61873494 61873613 -78443152 + L2 LINE L2 3180 3305 -8 1267 223 29 18 chr10 61873864 61874138 -78442627 + MLT1A1 LTR MaLR 1 277 -88 400 345 0 7 chr10 61874582 61874721 -78442044 + MIR SINE MIR 2 139 -123 180 77 0 0 chr10 61875348 61875374 -78441391 + (TG)n Simple_repeat Simple_repeat 1 26 0 330 132 0 0 chr10 61875425 61875478 -78441287 + (CA)n Simple_repeat Simple_repeat 2 54 0 406 354 57 37 chr10 61876045 61876398 -78440367 - L1MC4a LINE L1 -1709 4437 4078 729 219 61 36 chr10 61876451 61876647 -78440118 + L1ME2 LINE L1 5935 6135 -29 240 302 49 65 chr10 61876651 61877019 -78439746 - L1M4 LINE L1 -847 5299 4938 21 0 0 0 chr10 61877120 61877141 -78439624 + AT_rich Low_complexity Low_complexity 1 21 0 354 264 175 44 chr10 61877225 61877653 -78439112 - L1M4 LINE L1 -2388 3758 3275 388 299 7 20 chr10 61877828 61877975 -78438790 + MIR SINE MIR 118 262 0 948 197 19 14 chr10 61878555 61878763 -78438002 - MER3 DNA MER1_type 0 209 1 1202 66 13 0 chr10 61879071 61879223 -78437542 - AluSp/q SINE Alu -1 312 159 677 289 130 22 chr10 61880355 61880789 -78435976 + L2 LINE L2 2791 3271 -1 2154 93 11 0 chr10 61880801 61881123 -78435642 + AluSx SINE Alu 1 325 0 499 232 104 0 chr10 61881185 61881310 -78435455 + MIR SINE MIR 47 184 -78 26 0 0 0 chr10 61883288 61883314 -78433451 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 61884734 61884761 -78432004 + (A)n Simple_repeat Simple_repeat 1 27 0 2061 118 7 0 chr10 61888605 61888893 -78427872 + AluSq SINE Alu 21 310 -3 468 86 0 0 chr10 61888893 61888963 -78427802 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 2252 107 0 7 chr10 61890246 61890544 -78426221 + AluSx SINE Alu 1 296 -16 2578 58 3 0 chr10 61891086 61891394 -78425371 - AluY SINE Alu -2 309 1 1535 173 32 7 chr10 61891544 61891700 -78425065 - AluJb SINE Alu -22 290 122 2244 72 36 0 chr10 61891700 61891979 -78424786 - AluY SINE Alu -8 303 15 1535 173 32 7 chr10 61891979 61892105 -78424660 - AluJb SINE Alu -190 122 1 564 182 55 0 chr10 61893064 61893174 -78423591 - L2 LINE L2 -10 3303 3188 481 265 148 12 chr10 61893182 61893344 -78423421 - MIR SINE MIR -31 231 48 258 116 0 0 chr10 61895085 61895128 -78421637 + (T)n Simple_repeat Simple_repeat 1 43 0 192 111 0 0 chr10 61895329 61895365 -78421400 + (TG)n Simple_repeat Simple_repeat 2 37 0 181 324 20 39 chr10 61896709 61896811 -78419954 + L2 LINE L2 2694 2793 -521 1914 129 71 0 chr10 61897311 61897591 -78419174 + AluSx SINE Alu 1 300 -12 376 248 27 67 chr10 61898978 61899177 -78417588 - MIR SINE MIR -48 214 21 1415 183 111 0 chr10 61899944 61900206 -78416559 - AluJb SINE Alu -21 291 1 1836 126 0 69 chr10 61901835 61902152 -78414613 - AluSx SINE Alu -13 299 5 335 278 24 16 chr10 61902233 61902359 -78414406 + MER117 DNA MER1_type 20 146 -51 220 265 261 21 chr10 61902589 61902914 -78413851 + L3 LINE CR1 975 1377 -200 397 300 133 31 chr10 61903036 61903329 -78413436 + MER102b DNA MER1_type 15 337 -4 1053 216 103 10 chr10 61903346 61903638 -78413127 - MER5C DNA MER1_type -5 319 1 873 261 302 8 chr10 61905901 61906503 -78410262 + LTR50 LTR ERVL 17 795 0 2503 82 0 0 chr10 61907080 61907383 -78409382 + AluSc SINE Alu 1 303 -6 23 0 0 0 chr10 61909217 61909240 -78407525 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 61909868 61909889 -78406876 + AT_rich Low_complexity Low_complexity 1 21 0 305 248 98 39 chr10 61910569 61910722 -78406043 - MIR SINE MIR -71 191 30 2465 51 10 0 chr10 61911031 61911326 -78405439 + AluSp SINE Alu 1 298 -15 315 267 87 82 chr10 61911394 61911600 -78405165 - L2 LINE L2 0 3313 3107 372 115 4 13 chr10 61912548 61912630 -78404135 - Alu SINE Alu 0 302 250 2100 128 0 3 chr10 61913925 61914256 -78402509 + AluSq SINE Alu 1 313 0 293 254 0 15 chr10 61916100 61916167 -78400598 + MIR SINE MIR 81 146 -62 225 0 0 0 chr10 61916194 61916219 -78400546 + (T)n Simple_repeat Simple_repeat 1 25 0 194 108 54 0 chr10 61917006 61917043 -78399722 + GA-rich Low_complexity Low_complexity 2 40 0 644 239 18 50 chr10 61917139 61917357 -78399408 + MER34 LTR ERV1 1 211 -331 254 326 45 45 chr10 61917803 61917935 -78398830 + L2 LINE L2 3168 3299 -14 927 172 135 0 chr10 61922057 61922249 -78394516 - MER58A DNA MER1_type 0 224 7 600 279 82 49 chr10 61923528 61923772 -78392993 - MIR SINE MIR -8 254 3 351 294 73 7 chr10 61923986 61924122 -78392643 - MIR SINE MIR -17 245 101 454 246 157 34 chr10 61925077 61925313 -78391452 - LTR33 LTR ERVL -229 292 28 231 365 57 38 chr10 61925355 61925514 -78391251 - L2 LINE L2 -12 3260 3099 193 317 69 32 chr10 61926428 61926573 -78390192 + MIR3 SINE MIR 15 192 -70 199 227 23 0 chr10 61933034 61933078 -78383687 + L2 LINE L2 3225 3269 -3 789 284 20 20 chr10 61933123 61933373 -78383392 - MIR SINE MIR 0 262 13 378 57 0 0 chr10 61933381 61933434 -78383331 + (CA)n Simple_repeat Simple_repeat 2 54 0 2060 90 0 15 chr10 61934709 61934977 -78381788 + AluSg SINE Alu 34 297 -13 1554 160 64 14 chr10 61935769 61936050 -78380715 + AluJo SINE Alu 9 303 -9 2291 91 0 13 chr10 61937489 61937796 -78378969 - AluY SINE Alu -8 303 1 1773 153 25 19 chr10 61939544 61939865 -78376900 + MER33 DNA MER1_type 2 324 0 194 156 22 0 chr10 61940041 61940086 -78376679 + (TA)n Simple_repeat Simple_repeat 1 46 0 191 122 0 24 chr10 61940260 61940301 -78376464 + (GA)n Simple_repeat Simple_repeat 2 41 0 192 77 0 0 chr10 61942029 61942055 -78374710 + (T)n Simple_repeat Simple_repeat 1 26 0 23 0 0 0 chr10 61942144 61942167 -78374598 + AT_rich Low_complexity Low_complexity 1 23 0 289 262 138 21 chr10 61943504 61943649 -78373116 - MIR3 SINE MIR -3 205 44 2009 124 0 0 chr10 61944301 61944584 -78372181 + AluSq SINE Alu 1 283 -30 225 0 0 0 chr10 61944594 61944619 -78372146 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 241 77 0 51 chr10 61944714 61944753 -78372012 + Alu SINE Alu 81 117 -186 283 323 85 55 chr10 61944990 61945225 -78371540 + MIR SINE MIR 21 262 0 200 196 0 0 chr10 61945615 61945661 -78371104 + GA-rich Low_complexity Low_complexity 1 46 0 2291 96 7 0 chr10 61946188 61946491 -78370274 - AluSg SINE Alu -5 305 1 180 253 84 84 chr10 61946502 61946585 -78370180 - L2 LINE L2 -32 3240 3158 1253 181 58 36 chr10 61946607 61946883 -78369882 - AluJo SINE Alu -30 282 1 332 238 40 59 chr10 61946893 61946970 -78369795 + MIR3 SINE MIR 87 163 -45 795 282 99 53 chr10 61946970 61947293 -78369472 + MER102b DNA MER1_type 3 340 -1 332 238 40 59 chr10 61947293 61947316 -78369449 + MIR3 SINE MIR 163 185 -23 249 396 30 30 chr10 61947424 61947593 -78369172 + L3b LINE CR1 1387 1555 -28 1863 146 0 7 chr10 61947687 61947975 -78368790 - AluSc SINE Alu -23 286 1 2480 80 0 6 chr10 61948498 61948811 -78367954 + AluSq SINE Alu 1 311 -2 221 239 0 6 chr10 61949318 61949408 -78367357 + MIR SINE MIR 121 260 -2 2331 98 14 0 chr10 61949954 61950250 -78366515 - AluSx SINE Alu -12 300 1 587 246 74 45 chr10 61950252 61950460 -78366305 - MIR SINE MIR -46 216 17 353 273 26 70 chr10 61951031 61951184 -78365581 - L2 LINE L2 -164 3108 2960 2347 84 0 16 chr10 61951324 61951632 -78365133 + AluY SINE Alu 9 311 0 25 0 0 0 chr10 61952341 61952366 -78364399 + AT_rich Low_complexity Low_complexity 1 25 0 305 237 58 101 chr10 61952454 61952593 -78364172 + L2 LINE L2 3140 3272 0 269 333 31 25 chr10 61954654 61954813 -78361952 + L2 LINE L2 3153 3312 -1 185 243 0 0 chr10 61954875 61954912 -78361853 - MIR SINE MIR -109 153 117 1340 177 24 11 chr10 61956278 61956584 -78360181 - MER61B LTR ERV1 -28 396 1 360 0 0 0 chr10 61957859 61957899 -78358866 + (TA)n Simple_repeat Simple_repeat 2 41 0 1862 128 4 0 chr10 61961466 61961723 -78355042 - AluSx SINE Alu -19 293 36 405 219 35 65 chr10 61962421 61962590 -78354175 + MER104 DNA Tc2 11 174 -6 674 237 137 0 chr10 61962606 61962796 -78353969 - MER58A DNA MER1_type 0 224 9 2267 114 3 0 chr10 61963006 61963314 -78353451 + AluSx SINE Alu 1 309 -3 432 299 64 21 chr10 61963508 61963695 -78353070 + MIR SINE MIR 19 213 -49 217 147 0 0 chr10 61963801 61963835 -78352930 + MIR SINE MIR 215 248 -14 200 226 19 19 chr10 61963960 61964013 -78352752 - MIR3 SINE MIR -5 203 151 258 354 79 0 chr10 61964224 61964351 -78352414 - MIR3 SINE MIR -53 155 19 1598 75 4 21 chr10 61964712 61964953 -78351812 + L1MA8 LINE L1 5543 5779 -521 542 115 29 86 chr10 61964955 61965094 -78351671 + L1MA4 LINE L1 6164 6294 -6 2679 132 57 8 chr10 61965101 61965112 -78351653 + L1MA8 LINE L1 5771 5780 -511 198 0 0 0 chr10 61965112 61965134 -78351631 + (TA)n Simple_repeat Simple_repeat 1 22 0 2679 132 57 8 chr10 61965134 61965616 -78351149 + L1MA8 LINE L1 5780 6288 -3 188 315 98 22 chr10 61965633 61965725 -78351040 + MER5A DNA MER1_type 91 189 0 368 268 52 10 chr10 61966278 61966375 -78350390 + MIR SINE MIR 8 108 -154 1344 143 83 56 chr10 61966375 61966555 -78350210 - AluJb SINE Alu -15 297 106 234 0 0 0 chr10 61966555 61966581 -78350184 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1344 143 83 56 chr10 61966581 61966666 -78350099 - AluJb SINE Alu -206 106 25 187 359 0 65 chr10 61969002 61969094 -78347671 + L2 LINE L2 2969 3054 -218 195 284 74 12 chr10 61969349 61969430 -78347335 + MIR SINE MIR 57 142 -120 346 240 292 0 chr10 61970190 61970344 -78346421 - L2 LINE L2 -539 2775 2577 259 254 309 9 chr10 61970576 61970686 -78346079 + MIR SINE MIR 20 162 -100 696 226 67 113 chr10 61970705 61970829 -78345936 - L2 LINE L2 0 3313 3185 342 0 0 0 chr10 61970829 61970867 -78345898 + (TG)n Simple_repeat Simple_repeat 2 39 0 696 226 67 113 chr10 61970867 61971131 -78345634 - L2 LINE L2 -128 3185 2943 317 271 104 0 chr10 61971312 61971408 -78345357 - MIR SINE MIR -2 260 155 277 337 11 11 chr10 61971462 61971551 -78345214 + L2 LINE L2 3205 3293 -20 261 0 0 0 chr10 61971560 61971589 -78345176 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 210 206 122 103 chr10 61971591 61971698 -78345067 - L2 LINE L2 -30 3283 3175 2168 125 3 3 chr10 61972457 61972769 -78343996 - AluSq SINE Alu -1 312 1 376 288 75 14 chr10 61973590 61973736 -78343029 - MIR SINE MIR -107 155 1 213 211 0 0 chr10 61977982 61978020 -78338745 + (TG)n Simple_repeat Simple_repeat 1 38 0 462 63 38 0 chr10 61978039 61978118 -78338647 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 2158 156 74 3 chr10 61979256 61979646 -78337119 + MER47B DNA MER2_type 1 418 0 1276 245 68 21 chr10 61979736 61980120 -78336645 + MLT1I LTR MaLR 8 409 0 328 277 206 7 chr10 61981799 61981954 -78334811 + MER5A DNA MER1_type 1 186 -3 30 0 0 0 chr10 61982013 61982043 -78334722 + AT_rich Low_complexity Low_complexity 1 30 0 531 173 10 10 chr10 61982391 61982495 -78334270 - FLAM_A SINE Alu -13 129 26 186 43 0 0 chr10 61982554 61982577 -78334188 + (TAA)n Simple_repeat Simple_repeat 2 24 0 22 35 0 0 chr10 61984657 61984686 -78332079 + AT_rich Low_complexity Low_complexity 1 29 0 330 26 0 0 chr10 61985769 61985808 -78330957 + (TG)n Simple_repeat Simple_repeat 2 40 0 29 0 0 0 chr10 61985863 61985892 -78330873 + AT_rich Low_complexity Low_complexity 1 29 0 2360 87 0 7 chr10 61986883 61987181 -78329584 - AluSp SINE Alu -17 296 1 2165 168 64 14 chr10 61987185 61987855 -78328910 + L1MB4 LINE L1 5082 5779 -401 288 0 0 0 chr10 61987855 61987887 -78328878 + (TG)n Simple_repeat Simple_repeat 2 33 0 1419 126 10 80 chr10 61987889 61988191 -78328574 + L1MB4 LINE L1 5896 6176 -4 269 259 160 15 chr10 61988815 61988946 -78327819 + Charlie2a DNA MER1_type 1 150 -2632 647 234 41 0 chr10 61989014 61989185 -78327580 + Charlie2a DNA MER1_type 297 474 -2308 * 782 243 33 15 chr10 61989183 61989455 -78327310 + Charlie2a DNA MER1_type 733 1009 -1853 278 156 13 78 chr10 61989466 61989543 -78327222 + Charlie2a DNA MER1_type 2759 2830 -32 1160 175 70 38 chr10 61989543 61989700 -78327065 - MER33 DNA MER1_type -2261 324 173 2220 104 19 7 chr10 61989700 61990007 -78326758 + AluY SINE Alu 1 311 0 1160 175 70 38 chr10 61990007 61990163 -78326602 - MER33 DNA MER1_type -2412 173 1 933 151 39 78 chr10 61991165 61991370 -78325395 + MER58A DNA MER1_type 2 198 -26 238 365 57 38 chr10 61991458 61991617 -78325148 + L2 LINE L2 3099 3260 -12 379 246 157 34 chr10 61991659 61991895 -78324870 + LTR33 LTR ERVL 28 292 -229 238 336 80 15 chr10 61991995 61992132 -78324633 + MIR SINE MIR 117 262 0 240 229 108 12 chr10 61992271 61992354 -78324411 + MER103 DNA DNA 74 164 -2 374 215 81 54 chr10 61992597 61992746 -78324019 - MIR SINE MIR -50 212 60 895 131 186 0 chr10 61993272 61993455 -78323310 - L1MB8 LINE L1 -63 6115 5899 1779 94 82 0 chr10 61994597 61994841 -78321924 + AluSg SINE Alu 35 298 -12 866 254 61 64 chr10 61995316 61995465 -78321300 - MLT1J1 LTR MaLR -7 439 291 2172 133 123 5 chr10 61995465 61995848 -78320917 - MSTA LTR MaLR 0 428 1 866 254 61 64 chr10 61995848 61996138 -78320627 - MLT1J1 LTR MaLR -155 291 1 302 255 176 10 chr10 61996460 61996562 -78320203 - MIR SINE MIR -67 141 23 1132 238 44 10 chr10 61996615 61996988 -78319777 + LTR16C LTR ERVL 50 491 0 3919 175 106 29 chr10 61997189 61997285 -78319480 - L1MB7 LINE L1 -20 6164 6077 1607 181 65 41 chr10 61997285 61997672 -78319093 - MSTD LTR MaLR 0 396 1 3919 175 106 29 chr10 61997672 61998781 -78317984 - L1MB7 LINE L1 -107 6077 4838 2133 138 0 10 chr10 61998781 61999079 -78317686 + AluSx SINE Alu 1 295 -17 3919 175 106 29 chr10 61999079 61999279 -78317486 - L1MB7 LINE L1 -1346 4838 4655 404 312 59 21 chr10 61999534 61999720 -78317045 + MIR SINE MIR 28 220 -42 1841 164 7 7 chr10 62000668 62000973 -78315792 + AluJb SINE Alu 1 305 -7 1830 112 0 100 chr10 62001273 62001604 -78315161 - AluSx SINE Alu -14 298 1 2989 172 38 82 chr10 62001613 62001866 -78314899 - L1MB3 LINE L1 0 6183 5920 216 0 0 0 chr10 62001866 62001890 -78314875 + (CA)n Simple_repeat Simple_repeat 1 24 0 2989 172 38 82 chr10 62001890 62002188 -78314577 - L1MB3 LINE L1 -263 5920 5673 2311 72 14 0 chr10 62002188 62002480 -78314285 - AluY SINE Alu -15 296 1 2989 172 38 82 chr10 62002480 62002700 -78314065 - L1MB3 LINE L1 -510 5673 5445 300 142 83 142 chr10 62002710 62002830 -78313935 - L1M3 LINE L1 -645 5538 5426 14646 191 38 45 chr10 62003581 62003819 -78312946 + L1MA5 LINE L1 1375 1613 -5389 1891 124 33 7 chr10 62003819 62004129 -78312636 + AluSx SINE Alu 1 317 0 14646 191 38 45 chr10 62004129 62006862 -78309903 + L1MA5 LINE L1 1613 4363 -2639 1705 96 8 0 chr10 62006862 62007100 -78309665 + L1MA3 LINE L1 6064 6305 0 14646 191 38 45 chr10 62007100 62007118 -78309647 + L1MA5 LINE L1 4363 4380 -2622 1459 198 13 45 chr10 62007118 62007250 -78309515 + AluJo SINE Alu 2 137 -175 2261 107 0 0 chr10 62007250 62007541 -78309224 + AluSc SINE Alu 1 291 -18 1459 198 13 45 chr10 62007541 62007721 -78309044 + AluJo SINE Alu 137 304 -8 14646 191 38 45 chr10 62007721 62009724 -78307041 + L1MA5 LINE L1 4380 6395 -607 255 61 0 0 chr10 62009724 62009757 -78307008 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2075 99 14 11 chr10 62009762 62010044 -78306721 - AluSq SINE Alu -30 283 1 14646 191 38 45 chr10 62010044 62010152 -78306613 + L1MA5 LINE L1 6399 6506 -496 315 0 0 0 chr10 62010152 62010187 -78306578 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr10 62010186 62010209 -78306556 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 14646 191 38 45 chr10 62010187 62010522 -78306243 + L1MA5 LINE L1 6506 6799 -203 2021 105 3 74 chr10 62010522 62010846 -78305919 - AluSx SINE Alu -3 309 9 14646 191 38 45 chr10 62010846 62011047 -78305718 + L1MA5 LINE L1 6799 7000 -2 209 357 62 9 chr10 62011142 62011254 -78305511 - L2 LINE L2 -569 2745 2628 2280 102 0 3 chr10 62011262 62011556 -78305209 + AluSx SINE Alu 1 293 -19 666 75 0 0 chr10 62011673 62011753 -78305012 - MADE1 DNA Mariner 0 80 1 1004 224 98 75 chr10 62012096 62012494 -78304271 - MLT1I LTR MaLR -2 407 1 389 232 0 0 chr10 62012515 62012584 -78304181 - Tigger5 DNA MER2_type 0 2323 2255 2133 133 3 0 chr10 62012589 62012891 -78303874 + AluSx SINE Alu 3 305 -7 2195 116 13 3 chr10 62012912 62013222 -78303543 + AluSq SINE Alu 1 313 0 570 184 19 10 chr10 62013449 62013572 -78303193 + AluSg/x SINE Alu 179 302 0 1620 198 10 10 chr10 62013572 62013880 -78302885 - MER65C LTR ERV1 -153 308 1 277 289 72 82 chr10 62013880 62014074 -78302691 + L3 LINE CR1 1368 1559 -18 306 0 0 0 chr10 62014081 62014115 -78302650 + (CA)n Simple_repeat Simple_repeat 2 35 0 3841 182 50 14 chr10 62015999 62016839 -78299926 + L1 LINE L1 4119 4988 -1158 558 190 26 1 chr10 62017056 62017185 -78299580 + L1MEc LINE L1 2129 2243 -4183 1299 120 73 0 chr10 62017185 62017376 -78299389 - AluSg/x SINE Alu -21 291 87 6076 58 3 4 chr10 62018378 62019211 -78297554 - L1PA7 LINE L1 -149 6005 5174 961 201 0 30 chr10 62019309 62019508 -78297257 + AluJo SINE Alu 11 203 -109 295 248 20 39 chr10 62019599 62019742 -78297023 + CT-rich Low_complexity Low_complexity 1 140 0 848 200 14 48 chr10 62021407 62021617 -78295148 - AluSq SINE Alu -2 311 109 272 50 0 50 chr10 62022253 62022325 -78294440 + Alu SINE Alu 253 300 0 566 211 14 66 chr10 62022335 62022503 -78294262 + L1MCa LINE L1 1001 1157 -5269 2025 148 6 10 chr10 62022503 62022814 -78293951 + AluSx SINE Alu 1 310 -2 566 211 14 66 chr10 62022814 62022858 -78293907 + L1MCa LINE L1 1157 1202 -5224 684 236 43 35 chr10 62022879 62023133 -78293632 + L1MCa LINE L1 1151 1406 -5020 2137 107 0 13 chr10 62023148 62023457 -78293308 + AluSg SINE Alu 1 305 -5 200 196 0 0 chr10 62023984 62024030 -78292735 + CT-rich Low_complexity Low_complexity 1 46 0 283 323 85 55 chr10 62024420 62024655 -78292110 - MIR SINE MIR 0 262 21 377 230 56 39 chr10 62026162 62026305 -78290460 - MIR SINE MIR -62 146 37 389 274 53 0 chr10 62026797 62026910 -78289855 - L2 LINE L2 -2 3270 3152 1568 0 0 0 chr10 62027137 62027305 -78289460 + AluYb8 SINE Alu 151 318 0 2150 141 0 0 chr10 62029592 62029896 -78286869 + AluSx SINE Alu 1 304 -8 583 250 195 15 chr10 62029956 62030156 -78286609 - MIR SINE MIR -14 248 13 1102 205 19 30 chr10 62030922 62031060 -78285705 + ORSL DNA AcHobo 1 136 -139 2268 112 0 3 chr10 62031060 62031364 -78285401 - AluSq SINE Alu -10 303 1 1102 205 19 30 chr10 62031364 62031488 -78285277 + ORSL DNA AcHobo 136 260 -15 1131 140 11 22 chr10 62082129 62082307 -78234458 - AluSx SINE Alu -136 176 1 2031 105 53 3 chr10 62082996 62083281 -78233484 + AluSc SINE Alu 1 299 -10 183 369 0 27 chr10 62083285 62083396 -78233369 + L3 LINE CR1 1119 1226 -351 2269 115 3 6 chr10 62084092 62084404 -78232361 + AluSx SINE Alu 1 311 -1 2159 121 0 0 chr10 62084740 62085029 -78231736 - AluSg SINE Alu -21 289 1 181 178 44 15 chr10 62085578 62085713 -78231052 + (TA)n Simple_repeat Simple_repeat 2 140 0 204 248 28 121 chr10 62085961 62086102 -78230663 - MIR SINE MIR -70 192 65 2138 101 0 11 chr10 62088851 62089162 -78227603 - AluSq SINE Alu 0 308 1 252 331 28 49 chr10 62089163 62089305 -78227460 + MER5A DNA MER1_type 50 188 -1 525 255 146 33 chr10 62090430 62090642 -78226123 - MIR SINE MIR -6 256 21 315 0 0 0 chr10 62090670 62090705 -78226060 + (A)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr10 62090705 62090748 -78226017 + (TA)n Simple_repeat Simple_repeat 2 44 0 360 0 0 0 chr10 62092669 62092709 -78224056 + (CA)n Simple_repeat Simple_repeat 2 41 0 372 291 154 0 chr10 62094576 62094686 -78222079 - MIR3 SINE MIR -48 160 34 442 275 0 18 chr10 62094698 62094807 -78221958 + MIR SINE MIR 28 134 -128 2189 103 3 0 chr10 62095045 62095337 -78221428 - AluSx SINE Alu -19 293 1 243 173 238 65 chr10 62095368 62095553 -78221212 - MER113 DNA MER1_type? -297 224 8 1555 193 19 22 chr10 62095570 62095932 -78220833 + Charlie1b DNA MER1_type 5 365 -158 1263 216 38 63 chr10 62095944 62096420 -78220345 - L1ME1 LINE L1 -18 6148 5685 10993 129 23 12 chr10 62096420 62096644 -78220121 + Tigger1 DNA MER2_type 1 221 -2197 2357 98 0 0 chr10 62096644 62096940 -78219825 - AluSg SINE Alu -14 296 1 10993 129 23 12 chr10 62096940 62098573 -78218192 + Tigger1 DNA MER2_type 221 1878 -540 1126 169 108 8 chr10 62098573 62098833 -78217932 - AluJo SINE Alu 0 312 27 2933 142 25 34 chr10 62098833 62099040 -78217725 + Tigger1 DNA MER2_type 1867 2074 -344 1485 158 17 0 chr10 62099040 62099274 -78217491 + AluJb SINE Alu 75 312 0 2933 142 25 34 chr10 62099274 62099623 -78217142 + Tigger1 DNA MER2_type 2074 2418 0 1635 214 41 34 chr10 62099624 62100375 -78216390 - L1ME1 LINE L1 -481 5685 4929 864 110 39 13 chr10 62100378 62100533 -78216232 + Charlie1b DNA MER1_type 361 519 -4 1651 219 30 55 chr10 62100642 62100920 -78215845 - LTR40b LTR ERVL 0 462 198 2248 64 7 0 chr10 62100920 62101232 -78215533 - AluY SINE Alu 0 314 1 1651 219 30 55 chr10 62101232 62101426 -78215339 - LTR40b LTR ERVL -264 198 1 226 268 42 71 chr10 62102014 62102182 -78214583 + MLT1J LTR MaLR 347 509 -2 456 277 108 67 chr10 62103015 62103079 -78213686 - LTR33 LTR ERVL 0 521 461 1837 146 29 4 chr10 62103079 62103354 -78213411 + AluJb SINE Alu 1 309 0 202 74 0 0 chr10 62103354 62103381 -78213384 + (TAA)n Simple_repeat Simple_repeat 2 180 0 456 277 108 67 chr10 62103381 62103795 -78212970 - LTR33 LTR ERVL -60 461 22 617 62 0 0 chr10 62104657 62104737 -78212028 + MADE1 DNA Mariner 1 80 0 2226 91 0 53 chr10 62104749 62105069 -78211696 + AluSc SINE Alu 1 303 -6 23 0 0 0 chr10 62105075 62105098 -78211667 + AT_rich Low_complexity Low_complexity 1 23 0 343 317 39 0 chr10 62105168 62105272 -78211493 - MIR SINE MIR -37 225 118 21 0 0 0 chr10 62105442 62105463 -78211302 + AT_rich Low_complexity Low_complexity 1 21 0 2030 130 17 3 chr10 62106458 62106750 -78210015 - AluSx SINE Alu -16 296 1 257 311 42 50 chr10 62107767 62107886 -78208879 - L2 LINE L2 0 3272 3155 398 277 179 67 chr10 62108137 62108494 -78208271 - L2 LINE L2 -1 3312 2916 2454 78 0 0 chr10 62109058 62109352 -78207413 - AluSx SINE Alu -18 294 1 317 287 102 64 chr10 62111193 62111350 -78205415 + MIR SINE MIR 49 211 -51 26 0 0 0 chr10 62112258 62112284 -78204481 + AT_rich Low_complexity Low_complexity 1 26 0 243 260 91 13 chr10 62113652 62113729 -78203036 + MIR3 SINE MIR 113 195 -13 278 394 32 0 chr10 62113905 62114060 -78202705 + L2 LINE L2 2360 2519 -795 207 0 0 0 chr10 62114226 62114249 -78202516 + (A)n Simple_repeat Simple_repeat 1 23 0 252 86 0 0 chr10 62114250 62114285 -78202480 + (CAAAG)n Simple_repeat Simple_repeat 4 38 0 2181 90 3 7 chr10 62114881 62115170 -78201595 - AluSx SINE Alu -24 288 1 442 321 33 58 chr10 62115500 62115740 -78201025 - MIR SINE MIR -12 250 17 26 50 0 0 chr10 62116377 62116417 -78200348 + AT_rich Low_complexity Low_complexity 1 40 0 341 295 54 8 chr10 62116893 62117022 -78199743 + MIR SINE MIR 117 251 -11 328 295 76 0 chr10 62117082 62117187 -78199578 + L2 LINE L2 3200 3312 -1 22 56 0 0 chr10 62119273 62119309 -78197456 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 62120593 62120614 -78196151 + AT_rich Low_complexity Low_complexity 1 21 0 270 333 36 27 chr10 62121368 62121479 -78195286 - L2 LINE L2 -17 3255 3144 308 316 18 35 chr10 62121808 62121922 -78194843 + MIR SINE MIR 33 144 -118 697 321 29 4 chr10 62122741 62122981 -78193784 - MIR SINE MIR -8 254 9 193 241 35 35 chr10 62123112 62123170 -78193595 - L2 LINE L2 -81 3232 3175 585 277 111 30 chr10 62123266 62123537 -78193228 + L2 LINE L2 2427 2719 -595 1906 218 41 57 chr10 62123541 62124267 -78192498 - MER69 DNA AcHobo -85 2441 1727 24 0 0 29 chr10 62124267 62124286 -78192479 + AT_rich Low_complexity Low_complexity 1 20 -14 2207 107 13 7 chr10 62124286 62124596 -78192169 - AluSx SINE Alu 0 312 1 24 0 0 29 chr10 62124596 62124611 -78192154 + AT_rich Low_complexity Low_complexity 20 34 0 319 233 147 53 chr10 62124782 62124932 -78191833 - HAL1b LINE L1 -7 1341 1178 27 29 0 0 chr10 62124955 62124989 -78191776 + AT_rich Low_complexity Low_complexity 1 34 0 1864 147 6 29 chr10 62125355 62125668 -78191097 - AluSx SINE Alu -6 306 1 291 231 96 48 chr10 62126682 62126786 -78189979 - MLT1A2 LTR MaLR -248 126 18 260 297 55 0 chr10 62127081 62127209 -78189556 + L1MC4a LINE L1 4475 4609 -1537 1203 35 0 0 chr10 62127761 62127903 -78188862 + L1PA5 LINE L1 6004 6145 -9 5547 57 0 0 chr10 62128019 62128707 -78188058 + L1PA5 LINE L1 5465 6152 -2 21 0 0 0 chr10 62128707 62128728 -78188037 + AT_rich Low_complexity Low_complexity 1 21 0 302 368 172 5 chr10 62128856 62129060 -78187705 + L1MC4a LINE L1 5383 5620 -2188 376 240 0 0 chr10 62129210 62129306 -78187459 + AluSg/x SINE Alu 202 297 -5 224 339 161 17 chr10 62129342 62129460 -78187305 + L2 LINE L2 3138 3272 0 475 217 113 61 chr10 62131198 62131428 -78185337 + L1MC4a LINE L1 6442 6683 -1125 930 110 44 44 chr10 62131543 62131725 -78185040 + L1M3 LINE L1 5341 5522 -646 497 198 190 68 chr10 62132037 62132062 -78184703 - L1MC5 LINE L1 -32 7929 7908 2304 61 4 0 chr10 62132062 62132341 -78184424 + AluY SINE Alu 19 298 -13 497 198 190 68 chr10 62132341 62132710 -78184055 - L1MC5 LINE L1 -53 7908 7487 360 263 20 10 chr10 62132725 62132824 -78183941 + MER81 DNA DNA 7 106 -8 768 241 69 33 chr10 62132854 62133215 -78183550 - L1MC5 LINE L1 -516 7445 7072 722 286 104 23 chr10 62133218 62133564 -78183201 - L2 LINE L2 -568 2746 2373 222 250 39 0 chr10 62134004 62134056 -78182709 - MER91C DNA MER1_type -24 116 63 273 323 72 25 chr10 62134681 62134843 -78181922 - MIR SINE MIR -62 146 29 2374 125 11 0 chr10 62135071 62135440 -78181325 + L1PB2 LINE L1 5772 6144 -7 370 265 71 66 chr10 62135646 62135842 -78180923 - L1ME4a LINE L1 -201 5920 5724 504 329 46 91 chr10 62135911 62136633 -78180132 + L2 LINE L2 2492 3173 -99 2037 125 3 3 chr10 62136633 62136950 -78179815 - AluSg SINE Alu 0 310 1 504 329 46 91 chr10 62136950 62137038 -78179727 + L2 LINE L2 3173 3263 -9 822 281 90 61 chr10 62137230 62137788 -78178977 + MLT1K LTR MaLR 5 578 -10 348 83 0 0 chr10 62137975 62138023 -78178742 + (CA)n Simple_repeat Simple_repeat 2 49 0 306 296 17 26 chr10 62138527 62138642 -78178123 - L2 LINE L2 -3 3310 3197 319 273 0 0 chr10 62138663 62138729 -78178036 - L2 LINE L2 -46 3226 3161 264 239 52 37 chr10 62138745 62138879 -78177886 - Charlie7 DNA MER1_type -6 2606 2471 192 262 115 33 chr10 62140987 62141048 -78175717 - MIR3 SINE MIR -53 155 90 665 221 147 6 chr10 62141159 62141322 -78175443 - MER5A DNA MER1_type 0 189 4 247 312 13 0 chr10 62141324 62141401 -78175364 + MIR SINE MIR 1 78 -184 319 276 40 79 chr10 62141455 62141607 -78175158 - Charlie8 DNA MER1_type -2137 280 135 2241 87 13 29 chr10 62141678 62141988 -78174777 - AluSx SINE Alu -7 305 1 2094 131 3 0 chr10 62142051 62142348 -78174417 + AluSx SINE Alu 1 298 -14 359 352 34 11 chr10 62142397 62142573 -78174192 - MIR SINE MIR -55 207 28 478 265 121 60 chr10 62143005 62143220 -78173545 + MIR SINE MIR 29 256 -6 6071 124 134 113 chr10 62143352 62145013 -78171752 + pTR5 LTR ERV1 743 2438 0 224 255 0 0 chr10 62145097 62145144 -78171621 - MIR SINE MIR -131 131 85 230 180 40 20 chr10 62145194 62145244 -78171521 + MIR SINE MIR 97 147 -61 260 222 0 122 chr10 62146664 62146754 -78170011 - L2 LINE L2 -23 3290 3212 2081 114 0 33 chr10 62146832 62147138 -78169627 - AluSx SINE Alu -16 296 1 382 214 18 0 chr10 62147155 62147267 -78169498 + MER113 DNA MER1_type? 1 114 -407 1728 150 117 9 chr10 62147915 62148241 -78168524 - MLT1A1 LTR MaLR -3 362 2 395 341 7 0 chr10 62148319 62148457 -78168308 + MIR SINE MIR 12 150 -112 22 35 0 0 chr10 62148652 62148681 -78168084 + AT_rich Low_complexity Low_complexity 1 29 0 479 267 23 41 chr10 62148816 62148988 -78167777 + MIR SINE MIR 2 170 -92 208 286 0 18 chr10 62150394 62150450 -78166315 - MIR3 SINE MIR -5 203 149 1152 224 78 51 chr10 62150872 62151306 -78165459 + MLT1J1 LTR MaLR 1 446 0 285 225 138 12 chr10 62151664 62151744 -78165021 + MIR SINE MIR 88 177 -85 204 40 0 0 chr10 62152419 62152444 -78164321 + (CAGGA)n Simple_repeat Simple_repeat 1 25 0 288 250 36 80 chr10 62152563 62152675 -78164090 + MIR SINE MIR 85 191 -71 673 300 11 38 chr10 62153237 62153500 -78163265 - MIR SINE MIR 0 262 7 455 229 15 61 chr10 62154704 62154835 -78161930 + L2 LINE L2 3188 3312 -1 276 282 13 13 chr10 62155270 62155348 -78161417 + MIR3 SINE MIR 82 159 -49 451 247 106 79 chr10 62155478 62155537 -78161228 + MER102b DNA MER1_type 90 146 -1282 2146 119 0 3 chr10 62155537 62155866 -78160899 - AluSx SINE Alu 0 312 1 451 247 106 79 chr10 62155866 62156033 -78160732 + MER102b DNA MER1_type 146 322 -19 271 275 64 18 chr10 62156670 62156779 -78159986 - MIR SINE MIR -34 228 115 265 159 23 68 chr10 62157060 62157148 -78159617 - MER113 DNA MER1_type? -279 242 159 2021 143 0 0 chr10 62157186 62157472 -78159293 + AluSx SINE Alu 1 286 -26 830 192 7 0 chr10 62157501 62157652 -78159113 + FRAM SINE Alu 1 150 -26 24 0 0 0 chr10 62157652 62157676 -78159089 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 62158156 62158182 -78158583 + AT_rich Low_complexity Low_complexity 1 26 0 358 309 0 0 chr10 62158691 62158785 -78157980 - MER117 DNA MER1_type -3 194 101 550 274 98 29 chr10 62159590 62159835 -78156930 + L1ME LINE L1 5515 5776 -345 1456 164 62 15 chr10 62159908 62160182 -78156583 - AluJo SINE Alu -25 287 1 26 0 0 0 chr10 62160336 62160362 -78156403 + AT_rich Low_complexity Low_complexity 1 26 0 338 0 0 23 chr10 62160601 62160644 -78156121 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 640 221 18 0 chr10 62160649 62160762 -78156003 - FLAM_A SINE Alu -18 115 1 192 272 105 61 chr10 62161353 62161467 -78155298 - MIR SINE MIR -46 216 98 546 249 79 12 chr10 62162854 62163019 -78153746 + MIR SINE MIR 85 260 -2 1743 192 0 0 chr10 62163127 62163435 -78153330 - AluJb SINE Alu -4 308 1 1057 275 58 20 chr10 62163552 62163999 -78152766 - L1ME4a LINE L1 -236 5885 5422 603 275 121 0 chr10 62164075 62164257 -78152508 + MIR SINE MIR 18 221 -41 286 207 69 0 chr10 62164824 62164882 -78151883 - MIR3 SINE MIR -24 184 123 250 116 47 0 chr10 62165204 62165247 -78151518 + MIR SINE MIR 103 147 -61 2604 41 0 16 chr10 62165264 62165580 -78151185 - AluY SINE Alu 0 311 1 203 267 13 13 chr10 62165730 62165805 -78150960 - MIR SINE MIR -107 101 27 519 198 43 96 chr10 62166025 62166212 -78150553 - MER5B DNA MER1_type 0 178 2 344 196 34 101 chr10 62166264 62166473 -78150292 + Charlie7 DNA MER1_type 2410 2604 -8 184 271 0 51 chr10 62166597 62166656 -78150109 + L2 LINE L2 3179 3234 -79 354 206 232 19 chr10 62166696 62166851 -78149914 + MIR SINE MIR 63 250 -12 2018 174 57 48 chr10 62167185 62167680 -78149085 + Charlie1b DNA MER1_type 6 504 -19 1966 156 65 3 chr10 62168988 62169309 -78147456 - MER58B DNA MER1_type 0 341 1 1823 185 48 42 chr10 62169463 62169896 -78146869 + MER63C DNA MER1_type 49 484 -446 2013 185 81 71 chr10 62169897 62169927 -78146838 - MLT2B1 LTR ERVL -6 514 486 302 0 26 0 chr10 62169927 62169965 -78146800 + (TG)n Simple_repeat Simple_repeat 1 39 0 2013 185 81 71 chr10 62169965 62170443 -78146322 - MLT2B1 LTR ERVL -34 486 1 1236 135 31 0 chr10 62170443 62170635 -78146130 + MER63C DNA MER1_type 482 679 -251 1228 221 59 25 chr10 62170636 62170707 -78146058 - MER2 DNA MER2_type -1 344 277 1837 163 7 7 chr10 62170707 62171014 -78145751 + AluSx SINE Alu 1 307 -5 1228 221 59 25 chr10 62171014 62171264 -78145501 - MER2 DNA MER2_type -68 277 12 1097 206 53 4 chr10 62171258 62171505 -78145260 + MER63C DNA MER1_type 671 929 -1 * 384 22 0 0 chr10 62178206 62178251 -78138514 + (TG)n Simple_repeat Simple_repeat 2 46 0 186 43 0 0 chr10 62179922 62179945 -78136820 + (CCCCCT)n Simple_repeat Simple_repeat 5 27 0 299 209 252 0 chr10 62181339 62181439 -78135326 - MIR SINE MIR -63 145 42 321 316 66 20 chr10 62181820 62181972 -78134793 + MIR SINE MIR 54 212 -50 262 297 9 54 chr10 62182513 62182624 -78134141 + MER5A DNA MER1_type 36 141 -48 771 206 38 27 chr10 62182643 62182827 -78133938 + MIR SINE MIR 77 262 0 297 272 105 49 chr10 62183245 62183407 -78133358 + MIR SINE MIR 86 256 -6 1026 208 66 9 chr10 62183548 62183760 -78133005 + MER58A DNA MER1_type 1 224 0 22 0 0 0 chr10 62183962 62183984 -78132781 + AT_rich Low_complexity Low_complexity 1 22 0 195 342 60 47 chr10 62184281 62184362 -78132403 - L2 LINE L2 0 3272 3187 2403 76 26 3 chr10 62184362 62184665 -78132100 + AluY SINE Alu 1 310 -1 195 342 60 47 chr10 62184665 62184732 -78132033 - L2 LINE L2 -85 3187 3122 609 186 9 9 chr10 62184867 62184980 -78131785 - L2 LINE L2 -13 3300 3188 2626 42 0 0 chr10 62185155 62185461 -78131304 - AluY SINE Alu -5 306 1 1436 101 40 142 chr10 62188102 62188448 -78128317 + L1MA9 LINE L1 6002 6312 0 246 231 0 0 chr10 62188454 62188506 -78128259 + (TATATG)n Simple_repeat Simple_repeat 4 55 0 228 209 81 35 chr10 62188506 62188592 -78128173 - L1MC4 LINE L1 -1339 6703 6614 373 315 73 18 chr10 62189219 62189384 -78127381 - MIR3 SINE MIR -6 202 29 2070 81 3 18 chr10 62189637 62189920 -78126845 - AluSp SINE Alu -34 279 1 327 204 82 102 chr10 62190228 62190326 -78126439 - L2 LINE L2 -25 3288 3193 500 215 22 117 chr10 62190552 62190775 -78125990 - MIR SINE MIR -12 250 49 231 314 90 90 chr10 62191087 62191364 -78125401 - L2 LINE L2 -41 3231 2955 228 238 0 0 chr10 62191566 62191608 -78125157 + MER58A DNA MER1_type 9 50 -174 2115 125 0 0 chr10 62191609 62191925 -78124840 - AluSx SINE Alu 0 316 1 1283 164 0 14 chr10 62191928 62192142 -78124623 - AluSg/x SINE Alu -17 295 85 969 184 40 0 chr10 62192143 62192317 -78124448 + MER58A DNA MER1_type 43 223 -1 22 0 0 0 chr10 62192318 62192340 -78124425 + AT_rich Low_complexity Low_complexity 1 22 0 479 284 45 68 chr10 62192356 62192578 -78124187 - MIR SINE MIR -45 217 1 224 318 0 15 chr10 62192666 62192732 -78124033 + L2 LINE L2 2998 3062 -210 998 175 38 0 chr10 62192889 62193049 -78123716 + FRAM SINE Alu 1 166 0 649 274 26 40 chr10 62193068 62193190 -78123575 - Charlie8 DNA MER1_type -117 224 104 1485 103 0 10 chr10 62193190 62193418 -78123347 - AluSg/x SINE Alu 0 304 79 649 274 26 40 chr10 62193418 62193520 -78123245 - Charlie8 DNA MER1_type -237 104 2 398 283 106 45 chr10 62194118 62194316 -78122449 + MIR SINE MIR 50 259 -3 1955 119 3 25 chr10 62194620 62194906 -78121859 + AluSx SINE Alu 1 280 -32 1937 84 15 26 chr10 62196194 62196467 -78120298 - AluSq SINE Alu -6 307 38 23 33 0 0 chr10 62196564 62196594 -78120171 + AT_rich Low_complexity Low_complexity 1 30 0 1438 200 75 102 chr10 62197032 62197553 -78119212 - MLT1F1 LTR MaLR 0 567 61 1144 150 0 0 chr10 62197715 62197882 -78118883 - AluJb SINE Alu -17 295 129 633 246 8 0 chr10 62198389 62198523 -78118242 + MLT1B LTR MaLR 256 390 0 478 284 115 47 chr10 62198528 62199003 -78117762 - L1M4 LINE L1 -1982 4147 3639 23 54 0 0 chr10 62199376 62199413 -78117352 + AT_rich Low_complexity Low_complexity 1 37 0 413 265 99 55 chr10 62200063 62200244 -78116521 + LTR16A LTR ERVL 262 450 0 * 541 325 86 18 chr10 62200244 62200510 -78116255 + LTR33 LTR ERVL 76 360 -161 252 242 45 0 chr10 62200510 62200576 -78116189 - MLT1I LTR MaLR 0 409 341 329 259 95 9 chr10 62200650 62200766 -78115999 - MLT1I LTR MaLR -217 192 67 2578 62 0 0 chr10 62200792 62201101 -78115664 + AluY SINE Alu 1 309 -2 632 305 69 80 chr10 62201385 62202012 -78114753 - HAL1b LINE L1 -608 740 121 2190 112 6 13 chr10 62202062 62202376 -78114389 - AluSx SINE Alu 0 312 1 270 281 0 55 chr10 62202516 62202644 -78114121 + CT-rich Low_complexity Low_complexity 6 126 0 22 0 0 0 chr10 62203468 62203490 -78113275 + AT_rich Low_complexity Low_complexity 1 22 0 204 271 17 17 chr10 62205186 62205245 -78111520 + MIR SINE MIR 203 261 -1 680 292 10 14 chr10 62205787 62205996 -78110769 + MLT1H1 LTR MaLR 1 208 -347 24 32 0 0 chr10 62206099 62206130 -78110635 + AT_rich Low_complexity Low_complexity 1 31 0 30 45 0 0 chr10 62206198 62206242 -78110523 + AT_rich Low_complexity Low_complexity 1 44 0 27402 65 8 21 chr10 62206242 62210397 -78106368 + L1P2 LINE L1 1639 5731 -423 1929 247 77 25 chr10 62210388 62211393 -78105372 - L1MEc LINE L1 -3174 2955 1955 * 447 35 0 0 chr10 62212088 62212145 -78104620 + (CA)n Simple_repeat Simple_repeat 2 58 0 1827 216 8 8 chr10 62213614 62213971 -78102794 + MLT1A1 LTR MaLR 1 357 -8 202 336 28 28 chr10 62214400 62214507 -78102258 - MIR SINE MIR -108 154 48 828 268 190 16 chr10 62215344 62215781 -78100984 - LTR33 LTR ERVL -6 515 3 342 214 83 12 chr10 62216547 62216631 -78100134 + MIR SINE MIR 155 244 -18 1732 239 103 8 chr10 62217653 62218121 -78098644 - MLT1F1 LTR MaLR 0 567 56 1988 101 0 40 chr10 62218156 62218454 -78098311 - AluSx SINE Alu -26 286 1 190 324 52 37 chr10 62219346 62219482 -78097283 - L3 LINE CR1 -34 1543 1406 * 232 333 57 0 chr10 62219471 62219576 -78097189 - L2 LINE L2 -4 3268 3158 * 491 299 60 42 chr10 62219562 62219899 -78096866 - L3 LINE CR1 -149 1428 1044 247 156 42 135 chr10 62220536 62220632 -78096133 - L1ME4a LINE L1 -100 6021 5935 180 176 0 0 chr10 62220632 62220666 -78096099 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 491 269 68 64 chr10 62221129 62221393 -78095372 - L1MEc LINE L1 -909 1581 1234 589 313 80 21 chr10 62221487 62221864 -78094901 - L1MEc LINE L1 -4969 1150 752 21 89 0 0 chr10 62222532 62222588 -78094177 + AT_rich Low_complexity Low_complexity 1 56 0 896 190 115 40 chr10 62222638 62222864 -78093901 - MLT1D LTR MaLR -221 284 42 1180 225 65 47 chr10 62222953 62223401 -78093364 - L1MC5 LINE L1 -385 7576 7121 415 285 178 19 chr10 62223644 62223914 -78092851 - L1MC5 LINE L1 -2186 5622 5310 257 250 135 10 chr10 62225864 62225960 -78090805 - MER91C DNA MER1_type 0 140 33 319 282 96 62 chr10 62226660 62227472 -78089293 - L1MC4a LINE L1 -569 5597 5250 1625 187 0 26 chr10 62227472 62227782 -78088983 + AluJo SINE Alu 1 302 -10 319 282 96 62 chr10 62227782 62227822 -78088943 - L1MC4a LINE L1 -916 5250 5213 222 37 0 0 chr10 62228225 62228252 -78088513 + (TCCA)n Simple_repeat Simple_repeat 3 29 0 5756 45 0 0 chr10 62228542 62229266 -78087499 + L1PA7 LINE L1 5449 6172 0 899 141 98 0 chr10 62232572 62232735 -78084030 - L1PA11 LINE L1 0 6174 5996 21 0 0 0 chr10 62234226 62234247 -78082518 + AT_rich Low_complexity Low_complexity 1 21 0 1804 140 0 7 chr10 62234879 62235164 -78081601 + AluJb SINE Alu 1 283 -29 319 242 162 0 chr10 62235472 62235571 -78081194 - Charlie8 DNA MER1_type -2208 209 95 24 32 0 0 chr10 62236720 62236751 -78080014 + AT_rich Low_complexity Low_complexity 1 31 0 1740 181 0 7 chr10 62237161 62237465 -78079300 - AluJb SINE Alu -10 302 1 255 228 13 89 chr10 62237465 62237544 -78079221 + MIR SINE MIR 120 192 -70 2038 128 0 13 chr10 62237552 62237857 -78078908 + AluSx SINE Alu 1 301 -11 7087 16 0 1 chr10 62238419 62239237 -78077528 - L1PA2 LINE L1 -3 6152 5336 3368 28 0 0 chr10 62239235 62239635 -78077130 + L1P LINE L1 4809 5208 -938 * 605 318 38 12 chr10 62239633 62239976 -78076789 - L1M4 LINE L1 -2536 3610 3259 * 285 203 57 104 chr10 62240251 62240443 -78076322 - L1MC5 LINE L1 -390 7571 7389 425 287 109 20 chr10 62240508 62240778 -78075987 - L1MC5 LINE L1 -1033 6775 6477 12750 120 4 1 chr10 62240778 62242716 -78074049 + L1P LINE L1 1930 3874 -2272 769 161 7 7 chr10 62242716 62242852 -78073913 + L1PA8A LINE L1 5995 6131 0 12750 120 4 1 chr10 62242852 62242867 -78073898 + L1P LINE L1 3874 3887 -2259 746 156 0 0 chr10 62243203 62243325 -78073440 + FLAM_C SINE Alu 1 122 -11 570 251 0 0 chr10 62243329 62243508 -78073257 + GA-rich Low_complexity Low_complexity 1 179 0 781 337 31 43 chr10 62243520 62244330 -78072435 + PABL_B-int LTR ERV1 4675 7604 -516 215 31 31 0 chr10 62244903 62244935 -78071830 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 550 260 78 29 chr10 62246594 62246913 -78069852 + MER72 LTR ERV1 255 579 -24 302 161 0 0 chr10 62247033 62247089 -78069676 - L1MA3 LINE L1 -679 5618 5563 * 2060 130 3 7 chr10 62247084 62247415 -78069350 + L1MA3 LINE L1 5604 5935 -370 750 174 0 58 chr10 62247415 62247587 -78069178 + L1MA3 LINE L1 6144 6305 0 827 263 72 34 chr10 62247875 62248332 -78068433 - L1PA8A LINE L1 -339 5792 5317 29 28 0 0 chr10 62248590 62248626 -78068139 + AT_rich Low_complexity Low_complexity 1 36 0 301 210 10 50 chr10 62249236 62249336 -78067429 - L1MC5 LINE L1 -50 7911 7816 1708 251 42 57 chr10 62249818 62250274 -78066491 - L1MC4a LINE L1 -1920 5888 5442 2132 128 0 0 chr10 62250274 62250586 -78066179 - AluSx SINE Alu 0 312 1 1708 251 42 57 chr10 62250586 62250747 -78066018 - L1MC4a LINE L1 -2366 5442 5280 3905 217 26 21 chr10 62251303 62251347 -78065418 + L1MA9 LINE L1 4802 4844 -1468 2275 115 13 36 chr10 62251347 62251731 -78065034 - THE1C LTR MaLR 0 375 1 3905 217 26 21 chr10 62251731 62252667 -78064098 + L1MA9 LINE L1 4844 5774 -538 222 37 0 0 chr10 62252667 62252694 -78064071 + (TG)n Simple_repeat Simple_repeat 2 28 0 3905 217 26 21 chr10 62252694 62253137 -78063628 + L1MA9 LINE L1 5774 6238 -74 225 0 0 0 chr10 62253137 62253162 -78063603 + (TA)n Simple_repeat Simple_repeat 1 25 0 3905 217 26 21 chr10 62253162 62253200 -78063565 + L1MA9 LINE L1 6238 6274 -38 292 281 100 71 chr10 62253348 62253709 -78063056 + L1 LINE L1 3802 4151 -1995 2989 112 5 2 chr10 62253709 62254136 -78062629 + MSTA LTR MaLR 1 428 0 292 281 100 71 chr10 62254136 62254952 -78061813 + L1 LINE L1 4151 5019 -1127 249 320 13 13 chr10 62255291 62255369 -78061396 - MLT1I LTR MaLR -125 284 207 2374 251 96 19 chr10 62255370 62256613 -78060152 - L1M4 LINE L1 -618 5556 4181 240 35 0 0 chr10 62256613 62256642 -78060123 + (TA)n Simple_repeat Simple_repeat 2 30 0 197 32 0 32 chr10 62256669 62256700 -78060065 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 755 98 0 0 chr10 62256742 62256854 -78059911 + L1PA15 LINE L1 6049 6160 -5 626 250 114 19 chr10 62256967 62257231 -78059534 - L1M4 LINE L1 -1979 4167 3879 17629 208 20 17 chr10 62257252 62259019 -78057746 - L1PA15 LINE L1 -13 6803 5042 1510 113 185 8 chr10 62259019 62259284 -78057481 - AluSx SINE Alu 0 312 1 17629 208 20 17 chr10 62259284 62261336 -78055429 - L1PA15 LINE L1 -1774 5042 2997 2173 99 17 10 chr10 62261336 62261638 -78055127 + AluSq SINE Alu 1 304 -9 17629 208 20 17 chr10 62261638 62263658 -78053107 - L1PA15 LINE L1 -3819 2997 859 295 238 29 48 chr10 62263665 62263720 -78053045 - L1M4 LINE L1 -2263 3883 3828 1768 148 41 0 chr10 62263720 62264010 -78052755 + AluSc SINE Alu 1 301 0 295 238 29 48 chr10 62264010 62264058 -78052707 - L1M4 LINE L1 -2318 3828 3781 7152 28 3 0 chr10 62264159 62265025 -78051740 + L1P LINE L1 4340 5208 -938 1549 268 40 25 chr10 62265023 62265618 -78051147 - L1M4 LINE L1 -2536 3610 2999 * 1909 144 11 0 chr10 62265618 62265916 -78050849 + AluSx SINE Alu 4 304 0 1549 268 40 25 chr10 62265916 62266065 -78050700 - L1M4 LINE L1 -3147 2999 2854 700 207 35 0 chr10 62266183 62266328 -78050437 + MLT1D LTR MaLR 1 150 -355 818 260 74 12 chr10 62266349 62266672 -78050093 - L1MC/D LINE L1 -2211 5597 5255 378 356 54 10 chr10 62266894 62267189 -78049576 + L1MC4a LINE L1 6425 6732 -1076 2866 244 41 55 chr10 62267198 62267615 -78049150 - L1P LINE L1 -988 5158 4737 2013 117 11 0 chr10 62267615 62267897 -78048868 + AluSx SINE Alu 1 285 -27 2866 244 41 55 chr10 62267897 62267915 -78048850 - L1P LINE L1 -1409 4737 4720 411 21 0 0 chr10 62267915 62267963 -78048802 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2866 244 41 55 chr10 62267963 62268617 -78048148 - L1P LINE L1 -1426 4720 4083 2706 139 71 2 chr10 62268618 62269099 -78047666 + L1PB4 LINE L1 5639 6152 -4 1316 186 4 4 chr10 62269173 62269404 -78047361 + AluJo SINE Alu 82 312 0 2447 90 12 0 chr10 62269509 62269853 -78046912 - L1PA10 LINE L1 -2 6166 5819 437 320 127 14 chr10 62270272 62270634 -78046131 + L1MC4 LINE L1 7093 7495 -547 1581 148 24 17 chr10 62270776 62271073 -78045692 + L1MD1 LINE L1 5944 6242 0 6652 129 29 0 chr10 62271908 62273897 -78042868 + L1MA3 LINE L1 4258 6305 0 1121 213 4 22 chr10 62274296 62274521 -78042244 - MER58A DNA MER1_type -2 222 2 3171 32 0 3 chr10 62274979 62275357 -78041408 - L1PA4 LINE L1 -7 6148 5772 844 62 7 2 chr10 62275357 62275477 -78041288 + L1PA4 LINE L1 5683 5785 -370 1146 95 0 12 chr10 62275706 62275875 -78040890 - L1PA8A LINE L1 -28 6103 5937 771 253 82 0 chr10 62275875 62276057 -78040708 + MIR SINE MIR 20 216 -46 2195 148 61 33 chr10 62276251 62276767 -78039998 - MLT2A2 LTR ERVL 0 554 1 435 259 190 10 chr10 62277501 62277706 -78039059 - MIR SINE MIR -1 261 20 445 243 42 30 chr10 62278014 62278277 -78038488 + L1ME LINE L1 3095 3360 -2786 * 2804 244 32 19 chr10 62278273 62279549 -78037216 + L1ME LINE L1 4387 5677 -487 22 0 0 0 chr10 62280138 62280160 -78036605 + AT_rich Low_complexity Low_complexity 1 22 0 364 273 85 30 chr10 62280257 62280422 -78036343 + L2 LINE L2 2551 2724 -590 494 375 74 3 chr10 62280423 62280775 -78035990 + L2 LINE L2 2930 3306 -7 238 310 110 39 chr10 62280936 62281091 -78035674 - L2 LINE L2 -210 3062 2897 1000 177 17 6 chr10 62281104 62281285 -78035480 + MER20 DNA MER1_type 37 219 0 201 121 0 0 chr10 62281424 62281457 -78035308 + (TTCCC)n Simple_repeat Simple_repeat 3 35 0 321 326 60 16 chr10 62281557 62281741 -78035024 - L2 LINE L2 -420 2894 2703 1154 146 67 105 chr10 62281752 62281921 -78034844 - MER33 DNA MER1_type -2261 324 171 2178 83 36 0 chr10 62281921 62282197 -78034568 + AluSq SINE Alu 2 287 -26 1154 146 67 105 chr10 62282197 62282342 -78034423 - MER33 DNA MER1_type -2414 171 22 449 307 22 48 chr10 62282345 62282573 -78034192 - L2 LINE L2 -614 2700 2479 528 200 92 0 chr10 62282823 62282943 -78033822 + L2 LINE L2 3183 3313 0 200 219 0 0 chr10 62283134 62283175 -78033590 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 628 330 27 14 chr10 62283624 62283921 -78032844 + PABL_B-int LTR ERV1 1407 1707 -5415 4735 179 18 18 chr10 62284018 62284890 -78031875 - MER21B-int LTR ERV1 -3319 872 1 2440 186 38 37 chr10 62284911 62285711 -78031054 - MER21B LTR ERV1 -19 844 24 687 57 0 0 chr10 62285714 62285802 -78030963 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 739 363 34 20 chr10 62285814 62286549 -78030216 + PABL_B-int LTR ERV1 3227 4659 -3097 595 164 39 0 chr10 62286893 62286997 -78029768 - LTR36 LTR ERV1 0 611 504 1647 214 102 12 chr10 62287108 62287539 -78029226 + L1MA8 LINE L1 5690 6159 -132 * 3273 231 76 44 chr10 62287533 62288658 -78028107 + L1MC4 LINE L1 6730 7890 -152 229 239 30 0 chr10 62288657 62288724 -78028041 + L1MD1 LINE L1 6162 6230 -12 * 419 213 21 40 chr10 62289213 62290028 -78026737 + CT-rich Low_complexity Low_complexity 1 799 0 350 166 18 47 chr10 62290081 62290250 -78026515 + CT-rich Low_complexity Low_complexity 3 166 0 214 306 7 39 chr10 62290267 62290458 -78026307 + CT-rich Low_complexity Low_complexity 1 184 0 253 221 13 40 chr10 62290487 62290636 -78026129 + CT-rich Low_complexity Low_complexity 2 146 0 423 262 11 48 chr10 62290666 62290853 -78025912 + CT-rich Low_complexity Low_complexity 1 180 0 503 299 203 14 chr10 62291114 62291468 -78025297 - L2 LINE L2 -543 2771 2351 345 298 61 65 chr10 62292850 62293095 -78023670 - MER112 DNA MER1_type -12 248 5 231 233 58 29 chr10 62293347 62293450 -78023315 + L1MC2 LINE L1 1294 1399 -5017 467 316 99 28 chr10 62293450 62293843 -78022922 + L1MC2 LINE L1 1263 1683 -4743 595 321 68 25 chr10 62293980 62294111 -78022654 + L1MC2 LINE L1 3512 3636 -2790 2112 161 3 15 chr10 62294111 62294452 -78022313 - MER1B DNA MER1_type 0 337 1 595 321 68 25 chr10 62294452 62295000 -78021765 + L1MC2 LINE L1 3636 4302 -2124 225 65 0 0 chr10 62295000 62295031 -78021734 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 595 321 68 25 chr10 62295031 62295175 -78021590 + L1MC2 LINE L1 4302 4438 -1988 653 233 6 2 chr10 62295262 62295443 -78021322 + L1MC2 LINE L1 5083 5267 -1159 3343 170 22 37 chr10 62295444 62296198 -78020567 + L1MC2 LINE L1 5879 6621 -3 1906 241 58 93 chr10 62296579 62297920 -78018845 + L1MC5 LINE L1 6620 7913 -48 323 307 132 34 chr10 62298084 62298289 -78018476 + L1MC4a LINE L1 6111 6335 -1473 2887 79 42 7 chr10 62298364 62298768 -78017997 - MLT2A1 LTR ERVL 0 444 27 41988 75 14 2 chr10 62298870 62301622 -78015143 - HERVL-A1 LTR ERVL -182 5472 2754 195 42 0 0 chr10 62301622 62301646 -78015119 + (TA)n Simple_repeat Simple_repeat 2 25 0 1649 101 0 34 chr10 62301646 62301884 -78014881 - AluSq SINE Alu -17 296 67 41988 75 14 2 chr10 62301884 62304539 -78012226 - HERVL-A1 LTR ERVL -2899 2755 1 376 62 0 0 chr10 62304539 62304587 -78012178 - MLT2A1 LTR ERVL 0 453 406 1118 196 39 58 chr10 62304603 62305017 -78011748 + MLT2A2 LTR ERVL 151 450 -3 1238 199 29 126 chr10 62305075 62305527 -78011238 - MLT1-int LTR MaLR -5 1366 959 593 259 123 52 chr10 62305564 62306309 -78010456 + L1MC5 LINE L1 6670 7477 -484 707 252 66 35 chr10 62306478 62306855 -78009910 + L1MC5 LINE L1 7507 7895 -66 307 344 92 18 chr10 62307163 62307436 -78009329 + L1M4 LINE L1 2210 2502 -3644 542 298 96 10 chr10 62307610 62308026 -78008739 + L1M4 LINE L1 2695 3146 -3000 28 0 0 0 chr10 62308109 62308137 -78008628 + AT_rich Low_complexity Low_complexity 1 28 0 421 86 0 0 chr10 62308342 62308400 -78008365 + MLT2B3 LTR ERVL 1 58 -496 368 283 0 0 chr10 62308420 62308526 -78008239 + L1ME3 LINE L1 2957 3062 -3084 1930 204 36 8 chr10 62308621 62308978 -78007787 + MLT2B3 LTR ERVL 70 436 -118 210 128 0 51 chr10 62309009 62309048 -78007717 + (GAAAA)n Simple_repeat Simple_repeat 5 41 0 286 300 109 26 chr10 62309048 62309388 -78007377 + L1ME3 LINE L1 3684 4051 -2095 799 237 86 12 chr10 62309682 62309939 -78006826 + L1ME3 LINE L1 5659 5934 -228 487 303 13 0 chr10 62309945 62310100 -78006665 + L1ME3 LINE L1 6004 6160 -2 271 308 80 24 chr10 62310103 62310740 -78006025 + L1M4 LINE L1 4316 5033 -1113 695 320 74 37 chr10 62310758 62311161 -78005604 + L1ME LINE L1 53 470 -5600 1652 180 7 23 chr10 62311163 62311468 -78005297 + AluJb SINE Alu 1 300 -12 1137 246 87 22 chr10 62311473 62311985 -78004780 + L1ME LINE L1 592 1021 -4957 315 233 9 17 chr10 62314251 62314367 -78002398 + GA-rich Low_complexity Low_complexity 1 115 0 426 318 60 34 chr10 62315050 62315283 -78001482 + MIR SINE MIR 8 246 -16 249 309 12 74 chr10 62315377 62315539 -78001226 - MIR3 SINE MIR -38 170 19 243 380 53 0 chr10 62315560 62315673 -78001092 - L2 LINE L2 -4 3268 3150 701 0 24 0 chr10 62316559 62316643 -78000122 + (TATATG)n Simple_repeat Simple_repeat 3 88 0 5592 163 36 17 chr10 62317033 62317302 -77999463 + L1PB4 LINE L1 4126 4388 -1768 315 0 0 0 chr10 62317302 62317337 -77999428 + (CA)n Simple_repeat Simple_repeat 2 36 0 5592 163 36 17 chr10 62317337 62318703 -77998062 + L1PB4 LINE L1 4388 5795 -361 224 22 89 0 chr10 62318703 62318748 -77998017 + (TA)n Simple_repeat Simple_repeat 1 49 0 5592 163 36 17 chr10 62318748 62319113 -77997652 + L1PB4 LINE L1 5795 6152 -4 21 36 0 0 chr10 62320951 62320979 -77995786 + AT_rich Low_complexity Low_complexity 1 28 0 306 194 0 0 chr10 62323112 62323174 -77993591 + (TA)n Simple_repeat Simple_repeat 1 62 0 2447 140 143 150 chr10 62323213 62323577 -77993188 + L1MC3 LINE L1 6738 7103 -682 329 226 20 69 chr10 62323577 62323679 -77993086 + MLT1F1 LTR MaLR 35 131 -436 2447 140 143 150 chr10 62323679 62324098 -77992667 + L1MC3 LINE L1 7103 7616 -169 668 258 134 23 chr10 62324637 62324854 -77991911 + MLT1J LTR MaLR 44 284 -227 239 313 60 30 chr10 62325820 62325954 -77990811 + MIR SINE MIR 12 149 -113 533 193 0 0 chr10 62326071 62326159 -77990606 + MLT1D LTR MaLR 2 89 -416 321 261 126 8 chr10 62327836 62327955 -77988810 + MIR3 SINE MIR 75 207 -1 392 287 138 42 chr10 62328177 62328344 -77988421 + MIR SINE MIR 70 252 -10 26 0 0 0 chr10 62329406 62329432 -77987333 + AT_rich Low_complexity Low_complexity 1 26 0 544 326 50 82 chr10 62330177 62330640 -77986125 - MLT1K LTR MaLR -2 586 139 759 246 71 29 chr10 62330719 62330959 -77985806 - MIR SINE MIR 0 262 13 216 236 124 79 chr10 62331027 62331116 -77985649 + L2 LINE L2 3218 3310 -3 208 305 95 48 chr10 62331189 62331294 -77985471 + L2 LINE L2 3185 3294 -19 391 253 30 10 chr10 62331369 62331468 -77985297 - MIR SINE MIR -63 145 45 278 349 19 19 chr10 62332611 62332717 -77984048 - MIR3 SINE MIR -19 189 84 218 247 27 0 chr10 62333176 62333249 -77983516 + (TA)n Simple_repeat Simple_repeat 2 76 0 216 0 0 0 chr10 62334990 62335014 -77981751 + (TC)n Simple_repeat Simple_repeat 1 24 0 2593 96 15 2 chr10 62335910 62336304 -77980461 - L1MA3 LINE L1 0 6305 5907 668 51 0 0 chr10 62336304 62336383 -77980382 + THE1B LTR MaLR 4 82 -282 7793 136 27 15 chr10 62336383 62338134 -77978631 - L1 LINE L1 -3417 4148 2375 459 229 62 52 chr10 62338160 62338370 -77978395 + L1MC5 LINE L1 7701 7912 -49 1693 205 44 20 chr10 62338404 62338813 -77977952 + L1MB8 LINE L1 5725 6143 -35 271 321 27 27 chr10 62338802 62338989 -77977776 + L1MC5 LINE L1 7588 7774 -187 * 579 292 67 46 chr10 62340242 62340482 -77976283 + MIR SINE MIR 16 260 -2 207 0 0 0 chr10 62340625 62340648 -77976117 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2060 106 7 0 chr10 62340653 62340928 -77975837 - AluSc SINE Alu -32 277 1 2119 98 14 10 chr10 62341644 62341939 -77974826 + AluSq SINE Alu 1 296 -17 329 283 136 28 chr10 62342170 62342347 -77974418 + MIR3 SINE MIR 8 203 -5 293 298 31 99 chr10 62343204 62343365 -77973400 - MIR SINE MIR -111 151 2 247 164 33 0 chr10 62344473 62344534 -77972231 + GA-rich Low_complexity Low_complexity 4 66 0 187 179 0 51 chr10 62345598 62345637 -77971128 - L2 LINE L2 -6 3307 3271 567 213 8 8 chr10 62346529 62346651 -77970114 + MIR SINE MIR 141 262 0 29 0 0 0 chr10 62346948 62346977 -77969788 + AT_rich Low_complexity Low_complexity 1 29 0 350 219 232 32 chr10 62347110 62347265 -77969500 + MIR SINE MIR 12 197 -65 1992 113 18 7 chr10 62347290 62347573 -77969192 - AluSx SINE Alu -26 286 1 941 189 144 0 chr10 62348924 62349104 -77967661 + MER58A DNA MER1_type 19 224 0 771 316 22 4 chr10 62349132 62349357 -77967408 + MIR SINE MIR 2 230 -32 239 211 19 0 chr10 62349728 62349780 -77966985 + T-rich Low_complexity Low_complexity 5 57 0 245 318 74 34 chr10 62349892 62350040 -77966725 - MER5A DNA MER1_type -22 167 14 274 376 23 18 chr10 62351422 62351640 -77965125 - L3 LINE CR1 -42 1535 1317 820 214 41 120 chr10 62351663 62352099 -77964666 + MLT1A1 LTR MaLR 1 396 0 360 339 60 0 chr10 62352106 62352274 -77964491 - L3 LINE CR1 -297 1280 1103 2008 118 34 3 chr10 62352477 62352773 -77963992 + AluSx SINE Alu 3 307 -5 252 0 0 0 chr10 62354193 62354221 -77962544 + (A)n Simple_repeat Simple_repeat 1 28 0 587 59 0 12 chr10 62355982 62356067 -77960698 + (TC)n Simple_repeat Simple_repeat 1 84 0 432 261 45 9 chr10 62356670 62356781 -77959984 + MIR SINE MIR 6 120 -142 194 173 0 19 chr10 62357488 62357540 -77959225 + (CA)n Simple_repeat Simple_repeat 2 52 0 646 301 140 33 chr10 62357766 62358576 -77958189 + L2 LINE L2 2407 3306 -7 385 342 43 5 chr10 62358557 62358744 -77958021 - MIR SINE MIR -6 256 63 * 225 248 81 47 chr10 62358749 62358764 -77958001 - L1MA10 LINE L1 -2 6332 6318 725 262 48 5 chr10 62358764 62358974 -77957791 - L1ME1 LINE L1 -7 6159 5941 24 0 0 29 chr10 62359166 62359186 -77957579 + AT_rich Low_complexity Low_complexity 1 21 -13 2338 92 3 0 chr10 62359186 62359480 -77957285 + AluSp SINE Alu 1 295 -18 24 0 0 29 chr10 62359480 62359494 -77957271 + AT_rich Low_complexity Low_complexity 21 34 0 351 294 78 54 chr10 62359523 62359727 -77957038 + MIR SINE MIR 30 238 -24 252 267 46 69 chr10 62359826 62359957 -77956808 - MIR SINE MIR -88 174 47 297 0 0 0 chr10 62361297 62361330 -77955435 + (TG)n Simple_repeat Simple_repeat 2 34 0 383 365 25 0 chr10 62361708 62361946 -77954819 + Charlie8 DNA MER1_type 31 274 -2143 577 217 8 54 chr10 62362063 62362192 -77954573 + FLAM_A SINE Alu 1 123 -10 2058 124 35 3 chr10 62362473 62362763 -77954002 - AluSq SINE Alu -14 299 1 234 0 0 0 chr10 62363025 62363051 -77953714 + (TA)n Simple_repeat Simple_repeat 1 26 0 264 197 0 33 chr10 62363310 62363371 -77953394 + MIR SINE MIR 37 95 -167 2064 87 3 60 chr10 62364079 62364431 -77952334 + AluSx SINE Alu 1 335 0 569 220 17 0 chr10 62365502 62365620 -77951145 + MER45A DNA AcHobo 59 178 0 261 323 45 26 chr10 62368118 62368273 -77948492 + MLT1K LTR MaLR 368 525 -63 361 297 62 16 chr10 62368563 62368691 -77948074 - MIR SINE MIR -119 143 10 2269 110 3 3 chr10 62368749 62369057 -77947708 - AluSx SINE Alu -2 310 3 192 279 44 0 chr10 62369270 62369338 -77947427 + MIR3 SINE MIR 93 163 -45 5359 124 22 30 chr10 62369354 62370209 -77946556 - L1MA8 LINE L1 0 6291 5442 2606 43 0 0 chr10 62370209 62370513 -77946252 - AluY SINE Alu -7 304 1 5359 124 22 30 chr10 62370513 62370567 -77946198 - L1MA8 LINE L1 -849 5442 5389 184 360 27 36 chr10 62372381 62372492 -77944273 - L2 LINE L2 -1499 1815 1706 256 256 0 26 chr10 62372783 62372861 -77943904 - MIR SINE MIR -4 258 183 186 43 0 0 chr10 62373317 62373340 -77943425 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 302 188 12 59 chr10 62378140 62378225 -77938540 + L1MC5 LINE L1 7834 7914 -47 27 0 0 0 chr10 62378340 62378367 -77938398 + AT_rich Low_complexity Low_complexity 1 27 0 580 275 113 75 chr10 62378411 62378967 -77937798 - L1ME4a LINE L1 -255 5866 5290 1812 179 0 7 chr10 62379062 62379358 -77937407 + AluJo SINE Alu 4 297 -15 15620 153 18 16 chr10 62379533 62380508 -77936257 - L1MA3 LINE L1 0 7724 6753 2132 96 3 54 chr10 62380508 62380822 -77935943 - AluY SINE Alu -13 298 1 15620 153 18 16 chr10 62380822 62384288 -77932477 - L1MA3 LINE L1 -971 6753 3263 2359 87 10 0 chr10 62384519 62384829 -77931936 - AluSp SINE Alu 0 313 1 1222 149 37 67 chr10 62384944 62385212 -77931553 - Tigger7 DNA MER2_type 0 2491 2232 23 0 0 0 chr10 62385367 62385390 -77931375 + AT_rich Low_complexity Low_complexity 1 23 0 305 295 70 16 chr10 62386222 62386351 -77930414 + MIR SINE MIR 1 136 -126 365 248 142 35 chr10 62386717 62386830 -77929935 + L2 LINE L2 3189 3313 0 25 0 0 0 chr10 62388264 62388289 -77928476 + AT_rich Low_complexity Low_complexity 1 25 0 1938 154 3 17 chr10 62388472 62388770 -77927995 + AluSx SINE Alu 3 296 -16 474 282 40 45 chr10 62389341 62389543 -77927222 + MIR SINE MIR 3 203 -59 180 248 38 105 chr10 62389664 62389769 -77926996 - L3 LINE CR1 -9 1568 1471 1442 227 129 40 chr10 62391018 62391489 -77925276 - LTR33 LTR ERVL -3 518 6 230 247 12 37 chr10 62393473 62393554 -77923211 + L3b LINE CR1 1251 1329 -254 417 269 71 21 chr10 62394039 62394180 -77922585 - MIR SINE MIR 0 262 115 583 213 16 74 chr10 62394442 62394686 -77922079 - L1MC5 LINE L1 -132 7829 7600 26 30 0 0 chr10 62395285 62395318 -77921447 + GC_rich Low_complexity Low_complexity 1 33 0 223 368 161 7 chr10 62395649 62395804 -77920961 + MIR3 SINE MIR 20 198 -10 2759 7 0 0 chr10 62397663 62397960 -77918805 + AluY SINE Alu 1 297 -14 347 276 68 55 chr10 62398696 62398859 -77917906 - L1 LINE L1 -1100 5046 4882 456 149 42 23 chr10 62398943 62399330 -77917435 + (TA)n Simple_repeat Simple_repeat 1 394 0 21 36 0 0 chr10 62399630 62399658 -77917107 + AT_rich Low_complexity Low_complexity 1 28 0 496 323 69 34 chr10 62399739 62400421 -77916344 - L1 LINE L1 -1807 4339 3634 1145 181 34 21 chr10 62400815 62401052 -77915713 + MER96B DNA MER1_type? 7 246 -171 25 0 0 0 chr10 62401197 62401222 -77915543 + AT_rich Low_complexity Low_complexity 1 25 0 191 327 99 10 chr10 62402001 62402102 -77914663 - MIR SINE MIR -152 110 1 21 71 0 0 chr10 62402274 62402316 -77914449 + AT_rich Low_complexity Low_complexity 1 42 0 2231 96 3 0 chr10 62403104 62403397 -77913368 + AluY SINE Alu 1 294 -17 492 275 39 135 chr10 62403397 62403604 -77913161 + MER91A DNA MER1_type 3 189 -7 191 243 0 122 chr10 62403941 62404015 -77912750 + L2 LINE L2 3249 3313 0 189 233 112 52 chr10 62404335 62404451 -77912314 + L2 LINE L2 3183 3305 -8 27 29 0 0 chr10 62406141 62406175 -77910590 + AT_rich Low_complexity Low_complexity 1 34 0 370 284 66 64 chr10 62408078 62408455 -77908310 + HAL1b LINE L1 376 753 -595 290 279 125 50 chr10 62408744 62408839 -77907926 + L1MC/D LINE L1 5347 5434 -694 2229 80 0 14 chr10 62408839 62409128 -77907637 + AluY SINE Alu 1 285 -26 513 97 0 0 chr10 62409128 62409154 -77907611 + AluYa8 SINE Alu 1 315 0 290 279 125 50 chr10 62409154 62409354 -77907411 + L1MC/D LINE L1 5434 5656 -472 285 98 0 0 chr10 62410413 62410454 -77906311 + (GGGA)n Simple_repeat Simple_repeat 3 43 0 21 57 0 0 chr10 62410731 62410766 -77905999 + AT_rich Low_complexity Low_complexity 1 35 0 192 271 51 0 chr10 62414489 62414548 -77902217 - MER5B DNA MER1_type -2 176 126 6407 186 15 4 chr10 62414565 62415816 -77900949 - L1P LINE L1 -743 5403 4139 6105 74 2 5 chr10 62415813 62416619 -77900146 + L1PA14 LINE L1 5349 6152 -9 * 22 56 0 0 chr10 62416681 62416717 -77900048 + AT_rich Low_complexity Low_complexity 1 36 0 400 215 74 25 chr10 62416717 62416838 -77899927 - MER5B DNA MER1_type -48 130 4 516 278 11 50 chr10 62416935 62417115 -77899650 + MLT1J LTR MaLR 335 507 -4 690 230 41 5 chr10 62417710 62417906 -77898859 - MER105 DNA DNA -1 203 1 2121 89 32 0 chr10 62418324 62418606 -77898159 + AluY SINE Alu 1 291 -20 495 239 198 30 chr10 62418919 62419116 -77897649 + MER69 DNA AcHobo 356 585 -641 2973 196 41 83 chr10 62419230 62419519 -77897246 + MER69 DNA AcHobo 1451 1751 -775 2268 110 10 3 chr10 62419519 62419829 -77896936 + AluSx SINE Alu 1 312 0 2973 196 41 83 chr10 62419829 62420574 -77896191 + MER69 DNA AcHobo 1751 2441 -85 573 277 111 30 chr10 62420578 62420849 -77895916 - L2 LINE L2 -595 2719 2427 192 241 35 35 chr10 62420945 62421003 -77895762 + L2 LINE L2 3175 3232 -81 694 321 29 4 chr10 62421133 62421373 -77895392 + MIR SINE MIR 9 254 -8 302 316 18 35 chr10 62422192 62422306 -77894459 - MIR SINE MIR -118 144 33 262 333 36 27 chr10 62422635 62422746 -77894019 + L2 LINE L2 3144 3255 -17 21 0 0 0 chr10 62423500 62423521 -77893244 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr10 62424805 62424841 -77891924 + AT_rich Low_complexity Low_complexity 1 36 0 329 295 76 0 chr10 62426927 62427032 -77889733 - L2 LINE L2 -1 3312 3200 336 295 54 8 chr10 62427092 62427221 -77889544 - MIR SINE MIR -11 251 117 26 50 0 0 chr10 62427697 62427737 -77889028 + AT_rich Low_complexity Low_complexity 1 40 0 439 321 33 58 chr10 62428377 62428617 -77888148 + MIR SINE MIR 17 250 -12 2192 92 3 0 chr10 62428953 62429236 -77887529 + AluSx SINE Alu 5 288 -24 252 86 0 0 chr10 62429832 62429867 -77886898 + (CTTTG)n Simple_repeat Simple_repeat 4 38 0 207 0 0 0 chr10 62429868 62429891 -77886874 + (T)n Simple_repeat Simple_repeat 1 23 0 269 394 32 0 chr10 62430057 62430212 -77886553 - L2 LINE L2 -795 2519 2360 241 260 91 13 chr10 62430388 62430465 -77886300 - MIR3 SINE MIR -13 195 113 26 0 0 0 chr10 62431833 62431859 -77884906 + AT_rich Low_complexity Low_complexity 1 26 0 319 287 102 64 chr10 62432767 62432924 -77883841 - MIR SINE MIR -51 211 49 25 51 0 0 chr10 62434308 62434347 -77882418 + AT_rich Low_complexity Low_complexity 1 39 0 354 23 0 0 chr10 62436339 62436382 -77880383 + (CA)n Simple_repeat Simple_repeat 2 44 0 393 316 17 17 chr10 62437304 62437421 -77879344 + MIR SINE MIR 30 146 -62 21 0 0 0 chr10 62437476 62437497 -77879268 + AT_rich Low_complexity Low_complexity 1 21 0 1513 115 0 4 chr10 62439205 62439431 -77877334 + L1PA8 LINE L1 5939 6163 -9 204 276 112 69 chr10 62441279 62441395 -77875370 - MIR SINE MIR -76 186 66 291 289 156 46 chr10 62443086 62443259 -77873506 - MIR3 SINE MIR -6 202 11 318 316 123 18 chr10 62446184 62446355 -77870410 + MIR SINE MIR 1 189 -73 857 290 134 11 chr10 62446687 62447142 -77869623 - L1MC4a LINE L1 -1925 5883 5373 447 276 25 68 chr10 62447223 62447247 -77869518 - MIR SINE MIR -69 193 170 273 29 0 0 chr10 62447247 62447281 -77869484 + (GA)n Simple_repeat Simple_repeat 1 34 0 447 276 25 68 chr10 62447281 62447419 -77869346 - MIR SINE MIR -92 170 38 423 331 7 22 chr10 62447418 62447554 -77869211 - MIR SINE MIR -118 144 11 * 22 0 0 0 chr10 62447614 62447636 -77869129 + AT_rich Low_complexity Low_complexity 1 22 0 471 288 195 40 chr10 62447761 62448063 -77868702 - L2 LINE L2 0 3272 2924 2420 62 7 3 chr10 62448127 62448466 -77868299 - AluY SINE Alu 0 342 3 793 149 59 72 chr10 62449794 62450522 -77866243 + L1MC2 LINE L1 6137 7764 0 1813 146 7 20 chr10 62450888 62451182 -77865583 + AluJo SINE Alu 1 290 -22 243 0 0 0 chr10 62451182 62451209 -77865556 + (GA)n Simple_repeat Simple_repeat 2 28 0 189 310 116 101 chr10 62451931 62452060 -77864705 - MIR3 SINE MIR -28 180 50 555 324 79 67 chr10 62452091 62452730 -77864035 - L2 LINE L2 -8 3264 2626 922 263 74 36 chr10 62452779 62453170 -77863595 + MLT1J1 LTR MaLR 20 425 -21 278 219 0 16 chr10 62453892 62453956 -77862809 - MLT1L LTR MaLR -4 611 549 911 302 96 28 chr10 62453983 62454410 -77862355 - MLT1L LTR MaLR -141 474 19 236 100 25 0 chr10 62454507 62454547 -77862218 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 467 311 34 14 chr10 62455749 62455897 -77860868 + L2 LINE L2 3117 3267 -5 2061 131 0 0 chr10 62456148 62456431 -77860334 + AluSx SINE Alu 10 292 -20 359 289 98 34 chr10 62456626 62456861 -77859904 + L1M4 LINE L1 4590 4839 -1307 407 300 88 54 chr10 62456893 62457133 -77859632 + MIR SINE MIR 14 261 -1 23 68 0 0 chr10 62457202 62457246 -77859519 + AT_rich Low_complexity Low_complexity 1 44 0 356 333 42 68 chr10 62457267 62457667 -77859098 + L1M4 LINE L1 5014 5403 -743 219 327 71 44 chr10 62458175 62458288 -77858477 + MER5A DNA MER1_type 71 186 -3 246 274 65 12 chr10 62460358 62460464 -77856301 + MIR SINE MIR 37 148 -60 518 238 9 0 chr10 62461488 62461593 -77855172 + L2 LINE L2 3208 3313 0 181 169 36 121 chr10 62464676 62464759 -77852006 - L2 LINE L2 -323 2990 2915 * 396 231 11 11 chr10 62464757 62464848 -77851917 - MIR SINE MIR -90 172 82 221 0 35 0 chr10 62466919 62466948 -77849817 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1745 184 0 0 chr10 62467412 62467723 -77849042 + AluJb SINE Alu 1 311 0 918 290 67 35 chr10 62470342 62470745 -77846020 - MLT1K LTR MaLR -4 584 169 267 234 208 0 chr10 62471039 62471116 -77845649 - L2 LINE L2 -2 3270 3178 511 337 10 15 chr10 62471221 62471417 -77845348 - L2 LINE L2 -188 3084 2890 181 227 0 0 chr10 62471529 62471573 -77845192 + MIR SINE MIR 163 206 -56 2308 106 3 3 chr10 62471936 62472238 -77844527 - AluSq SINE Alu -11 302 1 194 200 0 0 chr10 62473510 62473545 -77843220 - MIR SINE MIR -110 152 118 2256 153 8 18 chr10 62473857 62474243 -77842522 + MLT1B LTR MaLR 3 384 -6 435 319 35 12 chr10 62474522 62474691 -77842074 - MIR SINE MIR -23 239 67 596 211 19 45 chr10 62474847 62475003 -77841762 + MIR SINE MIR 109 260 -2 431 313 28 11 chr10 62475194 62475370 -77841395 + L2 LINE L2 2761 2939 -375 644 259 94 20 chr10 62475379 62475580 -77841185 + L2 LINE L2 3098 3313 0 417 314 47 0 chr10 62475571 62475740 -77841025 - MIR SINE MIR -58 204 28 * 23 33 0 0 chr10 62475917 62475947 -77840818 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr10 62476304 62476325 -77840440 + (CA)n Simple_repeat Simple_repeat 1 21 0 211 287 31 101 chr10 62476970 62477297 -77839468 + L2 LINE L2 2686 3023 -249 354 230 0 0 chr10 62477582 62477656 -77839109 + L1ME4a LINE L1 5631 5704 -417 1122 163 16 0 chr10 62477676 62477860 -77838905 - AluJo SINE Alu -125 187 1 286 236 47 39 chr10 62477916 62478043 -77838722 + L1ME4a LINE L1 5785 5912 -209 1957 141 10 7 chr10 62478043 62478349 -77838416 + AluJb SINE Alu 1 307 -5 240 35 0 0 chr10 62478387 62478416 -77838349 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 662 299 80 13 chr10 62478435 62478679 -77838086 + MIR SINE MIR 19 258 -4 351 244 83 45 chr10 62478688 62478844 -77837921 + L1ME4a LINE L1 5957 6118 -3 228 86 0 0 chr10 62478930 62478965 -77837800 + (T)n Simple_repeat Simple_repeat 1 35 0 233 0 62 0 chr10 62478983 62479015 -77837750 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 371 327 119 0 chr10 62479176 62479335 -77837430 + MIR SINE MIR 84 261 -1 392 256 0 93 chr10 62479543 62479687 -77837078 + L2 LINE L2 3158 3285 -28 225 0 0 0 chr10 62479687 62479712 -77837053 + (TG)n Simple_repeat Simple_repeat 2 26 0 392 256 0 93 chr10 62479712 62479739 -77837026 + L2 LINE L2 3285 3313 0 208 189 0 0 chr10 62479793 62479830 -77836935 + L2 LINE L2 3261 3297 -16 21 57 0 0 chr10 62480074 62480109 -77836656 + AT_rich Low_complexity Low_complexity 1 35 0 664 229 43 38 chr10 62481551 62481761 -77835004 - MIR SINE MIR -1 261 51 228 301 204 0 chr10 62481730 62481823 -77834942 + MIR SINE MIR 21 132 -130 * 332 314 163 13 chr10 62481818 62482057 -77834708 - L2 LINE L2 -5 3308 3034 2347 316 62 44 chr10 62482175 62483817 -77832948 - MERVL LTR ERVL -1486 3999 2328 * 8969 181 69 28 chr10 62483791 62486019 -77830746 + ERVL-B1 LTR ERVL 3387 5757 -7 2142 144 22 4 chr10 62486019 62486375 -77830390 + MLT2B1 LTR ERVL 1 414 0 1170 277 55 11 chr10 62486446 62486807 -77829958 - MERVL LTR ERVL -3706 1290 914 960 258 174 6 chr10 62486831 62487153 -77829612 - LTR16A LTR ERVL -23 427 52 363 180 75 21 chr10 62487650 62487747 -77829018 + MIR SINE MIR 42 145 -81 525 294 28 6 chr10 62487748 62487928 -77828837 - MER117 DNA MER1_type 0 197 14 648 248 26 7 chr10 62489004 62489157 -77827608 - MIR3 SINE MIR -2 206 51 1248 151 23 9 chr10 62489295 62489514 -77827251 + THE1C LTR MaLR 2 223 -152 2761 164 14 53 chr10 62489516 62489783 -77826982 + L1MB8 LINE L1 5628 5904 -274 2216 111 0 7 chr10 62489783 62490081 -77826684 - AluSx SINE Alu -16 296 1 2761 164 14 53 chr10 62490081 62490313 -77826452 + L1MB8 LINE L1 5904 6105 -73 2237 98 14 0 chr10 62490313 62490608 -77826157 + AluSp SINE Alu 1 299 -14 2761 164 14 53 chr10 62490608 62490669 -77826096 + L1MB8 LINE L1 6105 6167 -11 3702 281 104 28 chr10 62490691 62490979 -77825786 - L2 LINE L2 -619 2695 2430 1884 175 3 0 chr10 62490979 62491287 -77825478 + AluJo SINE Alu 1 309 -3 3702 281 104 28 chr10 62491287 62492673 -77824092 - L2 LINE L2 -884 2430 893 794 172 0 0 chr10 62492747 62492863 -77823902 - FLAM_A SINE Alu -19 123 8 1767 191 127 26 chr10 62492912 62493336 -77823429 - MLT1C LTR MaLR 0 467 1 21 0 0 0 chr10 62493429 62493450 -77823315 + AT_rich Low_complexity Low_complexity 1 21 0 307 326 163 16 chr10 62494992 62495182 -77821583 + MIR SINE MIR 1 218 -44 2405 51 10 3 chr10 62495517 62495813 -77820952 + AluY SINE Alu 1 298 -13 678 194 208 58 chr10 62495821 62496182 -77820583 - L1MC5 LINE L1 -60 7901 7487 411 222 30 20 chr10 62496197 62496296 -77820469 + MER81 DNA DNA 7 106 -8 922 224 86 50 chr10 62496326 62496687 -77820078 - L1MC5 LINE L1 -516 7445 7072 723 286 104 23 chr10 62496690 62497036 -77819729 - L2 LINE L2 -568 2746 2373 222 250 39 0 chr10 62497476 62497528 -77819237 + MER91C DNA MER1_type 25 78 -62 281 315 72 25 chr10 62498155 62498317 -77818448 - MIR SINE MIR -62 146 29 2557 121 11 11 chr10 62498545 62498924 -77817841 + L1PB2 LINE L1 5772 6150 -1 278 253 75 70 chr10 62499120 62499306 -77817459 - L1ME4a LINE L1 -201 5920 5734 512 328 49 35 chr10 62499385 62499751 -77817014 + L2 LINE L2 2492 2862 -452 2034 125 3 3 chr10 62500107 62500424 -77816341 - AluSg SINE Alu 0 310 1 195 355 40 0 chr10 62500436 62500512 -77816253 + L2 LINE L2 3230 3308 -5 1005 276 90 61 chr10 62500704 62501262 -77815503 + MLT1K LTR MaLR 5 578 -10 420 71 0 0 chr10 62501450 62501506 -77815259 + (CA)n Simple_repeat Simple_repeat 2 57 0 291 296 17 26 chr10 62502010 62502125 -77814640 - L2 LINE L2 -3 3310 3197 321 273 0 0 chr10 62502146 62502212 -77814553 - L2 LINE L2 -46 3226 3161 320 239 52 37 chr10 62502228 62502362 -77814403 - Charlie7 DNA MER1_type -6 2606 2471 195 262 115 33 chr10 62504470 62504531 -77812234 - MIR3 SINE MIR -53 155 90 685 221 147 6 chr10 62504642 62504805 -77811960 - MER5A DNA MER1_type 0 189 4 244 312 13 0 chr10 62504807 62504884 -77811881 + MIR SINE MIR 1 78 -184 364 282 42 74 chr10 62504918 62505090 -77811675 - Charlie8 DNA MER1_type -1020 1397 135 661 86 0 76 chr10 62505161 62505266 -77811499 - AluSg/x SINE Alu -7 305 209 1056 169 17 0 chr10 62506692 62506869 -77809896 - AluJo SINE Alu -132 180 1 286 236 47 39 chr10 62506925 62507052 -77809713 + L1ME4a LINE L1 5785 5912 -209 1957 141 10 7 chr10 62507052 62507358 -77809407 + AluJb SINE Alu 1 307 -5 261 0 0 0 chr10 62507396 62507425 -77809340 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 664 294 80 13 chr10 62507444 62507688 -77809077 + MIR SINE MIR 19 258 -4 351 244 83 45 chr10 62507697 62507853 -77808912 + L1ME4a LINE L1 5957 6118 -3 371 327 119 0 chr10 62508233 62508392 -77808373 + MIR SINE MIR 84 261 -1 419 257 0 88 chr10 62508597 62508740 -77808025 + L2 LINE L2 3158 3285 -28 225 0 0 0 chr10 62508740 62508765 -77808000 + (TG)n Simple_repeat Simple_repeat 2 26 0 419 257 0 88 chr10 62508765 62508792 -77807973 + L2 LINE L2 3285 3313 0 208 189 0 0 chr10 62508846 62508883 -77807882 + L2 LINE L2 3261 3297 -16 21 57 0 0 chr10 62509127 62509162 -77807603 + AT_rich Low_complexity Low_complexity 1 35 0 664 229 43 38 chr10 62510604 62510814 -77805951 - MIR SINE MIR -1 261 51 228 301 204 0 chr10 62510783 62510876 -77805889 + MIR SINE MIR 21 132 -130 * 332 314 163 13 chr10 62510871 62511110 -77805655 - L2 LINE L2 -5 3308 3034 2360 316 62 44 chr10 62511228 62512870 -77803895 - MERVL LTR ERVL -1486 3999 2328 * 9074 174 70 28 chr10 62512844 62515071 -77801694 + ERVL-B1 LTR ERVL 3387 5757 -7 2142 146 22 4 chr10 62515071 62515427 -77801338 + MLT2B1 LTR ERVL 1 414 0 1219 271 55 11 chr10 62515498 62515859 -77800906 - MERVL LTR ERVL -3706 1290 914 951 267 174 6 chr10 62515883 62516205 -77800560 - LTR16A LTR ERVL -23 427 52 378 199 65 10 chr10 62516702 62516799 -77799966 + MIR SINE MIR 42 145 -81 525 294 28 6 chr10 62516800 62516980 -77799785 - MER117 DNA MER1_type 0 197 14 650 261 20 0 chr10 62518056 62518209 -77798556 - MIR3 SINE MIR -2 206 51 1248 151 23 9 chr10 62518347 62518566 -77798199 + THE1C LTR MaLR 2 223 -152 2784 162 14 53 chr10 62518568 62518835 -77797930 + L1MB8 LINE L1 5628 5904 -274 2201 117 3 3 chr10 62518835 62519134 -77797631 - AluSq SINE Alu -14 299 1 2784 162 14 53 chr10 62519134 62519366 -77797399 + L1MB8 LINE L1 5904 6105 -73 2341 101 3 0 chr10 62519366 62519664 -77797101 + AluSp SINE Alu 1 299 -14 2784 162 14 53 chr10 62519664 62519725 -77797040 + L1MB8 LINE L1 6105 6167 -11 3636 287 102 26 chr10 62519747 62520035 -77796730 - L2 LINE L2 -619 2695 2430 1870 179 3 0 chr10 62520035 62520343 -77796422 + AluJo SINE Alu 1 309 -3 3636 287 102 26 chr10 62520343 62521729 -77795036 - L2 LINE L2 -884 2430 893 794 172 0 0 chr10 62521803 62521919 -77794846 - FLAM_A SINE Alu -19 123 8 1767 191 127 26 chr10 62521968 62522392 -77794373 - MLT1C LTR MaLR 0 467 1 180 0 0 0 chr10 62522487 62522507 -77794258 + (A)n Simple_repeat Simple_repeat 1 20 0 318 325 162 16 chr10 62524049 62524240 -77792525 + MIR SINE MIR 1 219 -43 2968 6 0 0 chr10 62524573 62524891 -77791874 + AluYb8 SINE Alu 1 318 0 5914 105 4 1 chr10 62525909 62526738 -77790027 + L1PA13 LINE L1 5314 6144 -19 200 108 0 27 chr10 62526746 62526783 -77789982 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 353 218 27 18 chr10 62526865 62526975 -77789790 + MER113 DNA MER1_type? 6 116 -405 25 31 0 0 chr10 62527057 62527089 -77789676 + AT_rich Low_complexity Low_complexity 1 32 0 635 289 55 9 chr10 62527350 62527568 -77789197 + LTR67 LTR ERVL 34 261 -296 190 317 79 20 chr10 62527881 62527982 -77788783 + MIR SINE MIR 152 258 -4 342 289 37 53 chr10 62528513 62528700 -77788065 - L2 LINE L2 -18 3295 3112 419 288 9 0 chr10 62529785 62529896 -77786869 - MIR3 SINE MIR -1 207 96 * 643 268 127 5 chr10 62529894 62530099 -77786666 + MIR SINE MIR 9 238 -24 601 172 15 143 chr10 62530965 62531117 -77785648 - MER69A DNA AcHobo -2349 177 56 2110 118 7 7 chr10 62531117 62531414 -77785351 - AluSq SINE Alu -16 297 1 601 172 15 143 chr10 62531414 62531464 -77785301 - MER69A DNA AcHobo -2470 56 1 481 308 84 4 chr10 62531505 62531742 -77785023 + MIR SINE MIR 7 262 0 417 304 193 6 chr10 62532360 62532541 -77784224 + MIR SINE MIR 31 245 -17 32 81 0 0 chr10 62532560 62532634 -77784131 + AT_rich Low_complexity Low_complexity 1 74 0 466 288 71 22 chr10 62532830 62533014 -77783751 + MER117 DNA MER1_type 5 197 0 229 337 40 10 chr10 62533367 62533468 -77783297 + L2 LINE L2 3169 3272 0 338 286 7 82 chr10 62533481 62533628 -77783137 + L2 LINE L2 3177 3312 -1 187 356 17 52 chr10 62534650 62534765 -77782000 - MIR3 SINE MIR -91 117 7 24 0 0 0 chr10 62534996 62535020 -77781745 + AT_rich Low_complexity Low_complexity 1 24 0 2044 139 17 0 chr10 62535029 62535324 -77781441 + AluSq SINE Alu 1 300 -13 211 276 138 17 chr10 62536125 62536241 -77780524 + MIR SINE MIR 128 257 -5 2413 95 3 0 chr10 62536317 62536623 -77780142 + AluSg SINE Alu 1 307 -3 1182 242 0 0 chr10 62536704 62536923 -77779842 + MER58A DNA MER1_type 2 220 -4 2318 164 61 39 chr10 62537512 62537969 -77778796 + MLT1C LTR MaLR 1 467 0 541 235 158 0 chr10 62538886 62539038 -77777727 + MER45A DNA AcHobo 3 178 0 360 0 0 0 chr10 62539045 62539085 -77777680 + (TG)n Simple_repeat Simple_repeat 2 41 0 960 211 10 20 chr10 62539169 62539373 -77777392 + MER82 DNA MER2_type 2 203 -450 254 162 64 40 chr10 62539381 62539554 -77777211 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 353 169 21 74 chr10 62539482 62539671 -77777094 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 * 357 190 58 35 chr10 62539636 62539810 -77776955 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 1939 209 86 9 chr10 62539817 62540248 -77776517 + MER82 DNA MER2_type 190 653 0 230 268 127 0 chr10 62540255 62540347 -77776418 + MIR SINE MIR 32 135 -73 204 354 53 44 chr10 62540552 62540665 -77776100 + L2 LINE L2 3137 3250 -22 2671 141 78 5 chr10 62540732 62541180 -77775585 - L1MB5 LINE L1 0 6174 5694 307 239 36 109 chr10 62541259 62541397 -77775368 + L2 LINE L2 3144 3271 -1 361 248 83 41 chr10 62541525 62541670 -77775095 + MIR SINE MIR 63 213 -49 348 271 62 21 chr10 62541684 62541780 -77774985 - MIR SINE MIR -85 123 24 21 0 0 0 chr10 62542176 62542197 -77774568 + AT_rich Low_complexity Low_complexity 1 21 0 306 222 214 8 chr10 62542197 62542314 -77774451 - MER103 DNA DNA -2 164 24 381 196 186 0 chr10 62542445 62542542 -77774223 + L2 LINE L2 3195 3309 -4 180 0 0 0 chr10 62545048 62545068 -77771697 + (A)n Simple_repeat Simple_repeat 1 20 0 1756 158 0 48 chr10 62546314 62546630 -77770135 + AluJb SINE Alu 1 301 -11 2116 122 20 0 chr10 62546824 62547119 -77769646 + AluSx SINE Alu 6 306 -6 215 258 103 10 chr10 62547119 62547216 -77769549 - MIR3 SINE MIR -19 189 84 955 188 180 12 chr10 62548828 62549083 -77767682 - AluJo SINE Alu -14 298 1 1589 266 33 5 chr10 62549090 62549518 -77767247 - LTR16C LTR ERVL -40 451 12 236 271 0 0 chr10 62549559 62549618 -77767147 + L2 LINE L2 3254 3312 -1 430 280 10 10 chr10 62549734 62549834 -77766931 + MIR SINE MIR 25 124 -84 292 308 33 25 chr10 62549984 62550104 -77766661 + MIR SINE MIR 29 149 -113 212 308 13 13 chr10 62550708 62550786 -77765979 - MIR SINE MIR -107 155 78 880 300 8 12 chr10 62551215 62551465 -77765300 - MIR SINE MIR -12 250 2 295 340 58 10 chr10 62552070 62552173 -77764592 - MIR SINE MIR -68 140 33 500 211 88 54 chr10 62553864 62554011 -77762754 + MER5B DNA MER1_type 27 178 0 370 212 85 17 chr10 62554298 62554416 -77762349 - L2 LINE L2 0 3313 3188 3288 187 89 90 chr10 62554519 62555781 -77760984 - L1MC5 LINE L1 -45 7916 6657 636 257 121 53 chr10 62555866 62556369 -77760396 + L1MC/D LINE L1 5244 5788 -770 2458 79 3 0 chr10 62556369 62556672 -77760093 - AluSp SINE Alu -9 304 1 636 257 121 53 chr10 62556672 62556698 -77760067 + L1MC/D LINE L1 5788 5811 -747 2454 56 0 0 chr10 62556986 62557305 -77759460 - AluY SINE Alu 0 319 1 1529 136 5 0 chr10 62558792 62559013 -77757752 - AluSg/x SINE Alu -9 303 82 237 118 0 0 chr10 62559014 62559048 -77757717 - Alu SINE Alu -268 34 1 305 372 141 22 chr10 62559194 62559471 -77757294 + L2 LINE L2 2954 3263 -9 2050 134 16 3 chr10 62559540 62559846 -77756919 - AluSx SINE Alu -2 310 1 22 56 0 0 chr10 62559848 62559884 -77756881 + AT_rich Low_complexity Low_complexity 1 36 0 818 293 44 16 chr10 62560905 62561154 -77755611 - MIR SINE MIR -3 259 4 309 311 106 8 chr10 62561154 62561286 -77755479 + L3 LINE CR1 1416 1560 -17 210 358 41 8 chr10 62561607 62561730 -77755035 - L2 LINE L2 -2 3311 3185 241 307 165 11 chr10 62561789 62561965 -77754800 - L3 LINE CR1 -254 1323 1121 313 272 216 0 chr10 62562119 62562244 -77754521 - MIR SINE MIR 0 262 111 311 278 61 83 chr10 62562436 62562624 -77754141 - L2 LINE L2 0 3313 3129 2148 147 3 15 chr10 62562624 62562965 -77753800 + MER1B DNA MER1_type 1 337 0 311 278 61 83 chr10 62562965 62563006 -77753759 - L2 LINE L2 -184 3129 3089 1877 214 62 31 chr10 62563013 62563561 -77753204 - MER74B LTR ERVL 0 622 58 1987 129 7 3 chr10 62563950 62564237 -77752528 + AluSx SINE Alu 3 290 -22 668 95 60 0 chr10 62564237 62564405 -77752360 + (TA)n Simple_repeat Simple_repeat 1 178 0 329 100 44 56 chr10 62564407 62564497 -77752268 + (TTATA)n Simple_repeat Simple_repeat 5 93 0 362 139 90 6 chr10 62564497 62564663 -77752102 + (TA)n Simple_repeat Simple_repeat 1 180 0 263 224 0 30 chr10 62564790 62564857 -77751908 + GA-rich Low_complexity Low_complexity 1 65 0 2082 53 0 0 chr10 62565980 62566243 -77750522 - L1PA4 LINE L1 0 6155 5893 225 0 0 0 chr10 62566247 62566272 -77750493 + (T)n Simple_repeat Simple_repeat 1 25 0 606 287 60 25 chr10 62566277 62566723 -77750042 - L1M4 LINE L1 -935 5211 4750 229 250 31 0 chr10 62567276 62567340 -77749425 - MLT1L LTR MaLR -431 184 119 215 143 32 0 chr10 62567725 62567788 -77748977 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 21 0 0 0 chr10 62567960 62567981 -77748784 + AT_rich Low_complexity Low_complexity 1 21 0 205 274 88 39 chr10 62568526 62568628 -77748137 + L2 LINE L2 2297 2403 -911 198 397 0 0 chr10 62568758 62568836 -77747929 + L2 LINE L2 2595 2672 -642 256 308 44 33 chr10 62569257 62569348 -77747417 + L2 LINE L2 3132 3223 -49 1160 143 24 24 chr10 62569456 62569665 -77747100 - MER3 DNA MER1_type 0 209 1 471 274 17 56 chr10 62569729 62569908 -77746857 - LTR16C LTR ERVL -9 482 311 238 295 19 0 chr10 62570198 62570303 -77746462 - MLT1L LTR MaLR -39 576 470 431 343 64 0 chr10 62570440 62570659 -77746106 - MLT1L LTR MaLR -335 280 48 237 292 72 126 chr10 62570703 62571131 -77745634 + L3 LINE CR1 1068 1472 -105 289 348 49 49 chr10 62571134 62571378 -77745387 - MIR SINE MIR -17 245 2 836 246 74 0 chr10 62572347 62572550 -77744215 - MIR SINE MIR 0 262 45 30 89 0 0 chr10 62572561 62572640 -77744125 + AT_rich Low_complexity Low_complexity 1 79 0 22 0 0 0 chr10 62572823 62572845 -77743920 + AT_rich Low_complexity Low_complexity 1 22 0 224 297 0 0 chr10 62573353 62573427 -77743338 + A-rich Low_complexity Low_complexity 1 74 0 512 275 90 0 chr10 62575735 62575913 -77740852 + MIR SINE MIR 63 256 -6 2056 196 59 10 chr10 62576457 62576966 -77739799 + L1MC3 LINE L1 7252 7785 0 302 194 129 0 chr10 62577194 62577256 -77739509 - MIR3 SINE MIR -41 167 98 242 222 16 32 chr10 62577361 62577424 -77739341 + MER90 LTR ERV1 527 588 -26 407 289 124 35 chr10 62577527 62577728 -77739037 - MIR SINE MIR 0 262 44 999 210 65 60 chr10 62578072 62578458 -77738307 - MER113 DNA MER1_type? -101 420 33 705 184 142 21 chr10 62580665 62580837 -77735928 - MER90 LTR ERV1 -362 213 15 1911 149 33 0 chr10 62580837 62581138 -77735627 - AluSx SINE Alu 0 312 2 705 184 142 21 chr10 62581138 62581155 -77735610 - MER90 LTR ERV1 -560 15 1 261 0 0 0 chr10 62582381 62582410 -77734355 + (TG)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr10 62582757 62582781 -77733984 + AT_rich Low_complexity Low_complexity 1 24 0 220 389 6 30 chr10 62583062 62583229 -77733536 - L2 LINE L2 -3072 242 80 963 161 12 0 chr10 62583429 62583591 -77733174 - AluJb SINE Alu -18 294 131 297 228 53 61 chr10 62583591 62583705 -77733060 + L2 LINE L2 2223 2335 -979 579 311 90 65 chr10 62583725 62583788 -77732977 - LTR33 LTR ERVL -5 516 456 1716 168 4 0 chr10 62583788 62584050 -77732715 + AluSx SINE Alu 1 263 -49 579 311 90 65 chr10 62584050 62584388 -77732377 - LTR33 LTR ERVL -65 456 105 313 336 141 46 chr10 62584534 62584796 -77731969 + L2 LINE L2 2384 2670 -644 1125 276 97 26 chr10 62584946 62585687 -77731078 - L2 LINE L2 -47 3266 2476 1236 241 33 46 chr10 62586676 62587132 -77729633 + L1MC/D LINE L1 5374 5823 -1985 298 49 0 0 chr10 62587149 62587190 -77729575 - MADE1 DNA Mariner -39 41 1 757 192 27 7 chr10 62588958 62589104 -77727661 - FRAM SINE Alu -30 146 1 420 278 89 41 chr10 62589352 62589521 -77727244 - MIR SINE MIR -21 241 65 308 95 0 0 chr10 62589738 62589780 -77726985 - MLT2B1 LTR ERVL 0 414 373 817 204 73 10 chr10 62589921 62590174 -77726591 - MLT2B1 LTR ERVL -144 270 1 950 182 30 0 chr10 62590174 62590377 -77726388 - ERVL-B1 LTR ERVL -7 5757 5549 1358 186 47 63 chr10 62590392 62590774 -77725991 + MLT1B LTR MaLR 1 376 -14 1353 201 29 23 chr10 62590770 62591113 -77725652 + MSTB1 LTR MaLR 22 366 -66 * 27 29 0 0 chr10 62591406 62591440 -77725325 + AT_rich Low_complexity Low_complexity 1 34 0 1866 118 75 0 chr10 62592198 62592477 -77724288 - AluSq SINE Alu -13 300 1 2274 96 3 16 chr10 62593171 62593485 -77723280 + AluSx SINE Alu 1 310 -2 35 0 0 0 chr10 62593826 62593861 -77722904 + AT_rich Low_complexity Low_complexity 1 35 0 213 39 0 0 chr10 62594471 62594497 -77722268 + (CA)n Simple_repeat Simple_repeat 2 27 0 229 245 19 0 chr10 62594705 62594758 -77722007 + 7SK RNA RNA 139 192 -1 241 365 154 0 chr10 62594835 62594939 -77721826 + L2 LINE L2 3143 3262 -10 576 290 168 23 chr10 62595453 62595667 -77721098 - MIR SINE MIR -10 252 8 334 254 78 115 chr10 62596347 62596591 -77720174 - MER102a DNA MER1_type 0 330 96 341 339 27 41 chr10 62596905 62597126 -77719639 - L3b LINE CR1 -251 1332 1115 457 346 130 19 chr10 62597489 62597976 -77718789 - L2 LINE L2 -263 3009 2469 255 214 0 0 chr10 62598120 62598190 -77718575 + (TAG)n Simple_repeat Simple_repeat 1 70 0 2051 117 50 51 chr10 62598282 62599064 -77717701 - MER4D LTR ERV1 0 872 1 2105 39 0 0 chr10 62599843 62600097 -77716668 + L1PA5 LINE L1 5901 6154 0 294 215 11 54 chr10 62600287 62600380 -77716385 + Charlie5 DNA MER1_type 1395 1483 -1129 699 172 6 32 chr10 62600380 62600537 -77716228 + Charlie5 DNA MER1_type 1449 1601 -1011 296 262 71 16 chr10 62600876 62601059 -77715706 - L1MEc LINE L1 -4663 1733 1541 332 209 112 97 chr10 62601362 62601461 -77715304 - L1MEc LINE L1 -5068 1137 1034 306 0 0 0 chr10 62601461 62601495 -77715270 + (TG)n Simple_repeat Simple_repeat 2 35 0 332 209 112 97 chr10 62601495 62601529 -77715236 - L1MEc LINE L1 -5171 1034 1002 2516 65 0 3 chr10 62601591 62601900 -77714865 - AluY SINE Alu -3 308 1 280 159 275 0 chr10 62603030 62603099 -77713666 - MIR SINE MIR -3 259 172 1386 146 9 26 chr10 62603809 62604042 -77712723 - MER30 DNA MER1_type -1 229 1 913 93 8 0 chr10 62604165 62604294 -77712471 + L1PA10 LINE L1 6034 6163 -5 401 319 59 0 chr10 62604436 62604571 -77712194 + MIR SINE MIR 104 246 -16 266 336 39 0 chr10 62604591 62604695 -77712070 + MIR SINE MIR 133 240 -22 262 272 65 95 chr10 62604826 62604995 -77711770 - MIR SINE MIR -51 211 48 293 215 74 59 chr10 62606897 62607032 -77709733 + MIR SINE MIR 90 226 -36 284 308 167 8 chr10 62607138 62607258 -77709507 - MIR SINE MIR 0 262 124 412 308 71 50 chr10 62607325 62607523 -77709242 + MIR3 SINE MIR 1 202 -6 240 269 0 0 chr10 62607543 62607595 -77709170 + GA-rich Low_complexity Low_complexity 1 52 0 369 273 115 14 chr10 62607650 62607789 -77708976 - MIR SINE MIR -47 215 63 184 314 43 57 chr10 62608168 62608308 -77708457 + MIR SINE MIR 101 238 -24 275 322 79 23 chr10 62610880 62611057 -77705708 - MIR SINE MIR -56 206 20 2062 258 35 12 chr10 62611082 62611729 -77705036 + L1ME3A LINE L1 5467 6128 -42 1593 175 0 0 chr10 62611770 62612038 -77704727 - L1MC1 LINE L1 -17 6316 6049 2508 56 0 0 chr10 62612168 62612473 -77704292 - AluY SINE Alu -6 305 1 1150 274 47 45 chr10 62612631 62613080 -77703685 + MLT1K LTR MaLR 132 581 -7 207 414 90 35 chr10 62613360 62613737 -77703028 + L2 LINE L2 2866 3263 -9 285 244 22 33 chr10 62613784 62613874 -77702891 + MIR SINE MIR 63 151 -111 1925 253 47 24 chr10 62613930 62614463 -77702302 + MLT1E2 LTR MaLR 18 562 -64 418 119 0 0 chr10 62614468 62614527 -77702238 - AluS SINE Alu -18 291 233 389 107 2 18 chr10 62614527 62614594 -77702171 + MLT1E2 LTR MaLR 484 626 0 456 261 91 40 chr10 62616484 62616683 -77700082 + L2 LINE L2 3103 3311 -2 338 179 106 46 chr10 62616683 62616834 -77699931 - L1ME4a LINE L1 -251 5870 5711 216 0 0 0 chr10 62617264 62617288 -77699477 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2055 102 4 0 chr10 62617295 62617570 -77699195 - AluSx SINE Alu -36 276 1 23 0 0 0 chr10 62618205 62618228 -77698537 + AT_rich Low_complexity Low_complexity 1 23 0 2275 127 32 19 chr10 62618813 62619183 -77697582 + THE1C LTR MaLR 1 375 0 244 308 35 21 chr10 62619564 62619707 -77697058 - Charlie8 DNA MER1_type -2212 205 61 2193 218 11 56 chr10 62620627 62621234 -77695531 - L1MB4 LINE L1 -4 6176 5597 3243 130 38 31 chr10 62621400 62621922 -77694843 + MER1A DNA MER1_type 2 527 0 211 194 0 0 chr10 62622200 62622236 -77694529 + (CA)n Simple_repeat Simple_repeat 1 36 0 6128 147 19 26 chr10 62622433 62623611 -77693154 - L1MC1 LINE L1 0 6333 5159 246 322 0 81 chr10 62624376 62624525 -77692240 + L2 LINE L2 3174 3310 -3 324 297 153 0 chr10 62624602 62624713 -77692052 + MIR3 SINE MIR 53 180 -28 213 186 34 0 chr10 62626977 62627036 -77689729 + A-rich Low_complexity Low_complexity 5 65 0 2031 133 0 7 chr10 62627355 62627657 -77689108 - AluSx SINE Alu -10 302 3 1460 275 106 34 chr10 62627710 62629253 -77687512 - L1ME3 LINE L1 -35 6127 4479 207 250 0 0 chr10 62629280 62629320 -77687445 + (CA)n Simple_repeat Simple_repeat 1 40 0 1607 223 142 38 chr10 62629350 62629928 -77686837 - L1MC4 LINE L1 -602 7440 6803 1138 264 65 36 chr10 62629925 62630257 -77686508 - L1ME3 LINE L1 -1854 4292 3971 * 1940 179 146 16 chr10 62630257 62630703 -77686062 - MLT1D LTR MaLR -1 504 1 1138 264 65 36 chr10 62630703 62631293 -77685472 - L1ME3 LINE L1 -2175 3971 2898 182 103 0 51 chr10 62631323 62631362 -77685403 + (CATA)n Simple_repeat Simple_repeat 2 38 0 510 327 46 77 chr10 62631548 62631889 -77684876 - L1ME3A LINE L1 -301 5869 5549 287 64 0 21 chr10 62631889 62631936 -77684829 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 510 327 46 77 chr10 62631936 62632177 -77684588 - L1ME3A LINE L1 -621 5549 5302 25 31 0 0 chr10 62632646 62632678 -77684087 + AT_rich Low_complexity Low_complexity 1 32 0 2741 130 95 0 chr10 62632844 62633328 -77683437 - Tigger3(Golem) DNA MER2_type -2 3027 2498 14657 209 18 15 chr10 62633328 62637752 -77679013 - L1PA15 LINE L1 -25 6791 2357 2895 106 20 2 chr10 62637764 62638162 -77678603 + MLT2A1 LTR ERVL 1 405 -39 315 151 48 0 chr10 62638162 62638288 -77678477 + (TA)n Simple_repeat Simple_repeat 2 133 0 385 75 0 0 chr10 62638289 62638342 -77678423 + MLT2A1 LTR ERVL 401 453 0 1739 271 17 43 chr10 62638342 62638873 -77677892 - L1PA15 LINE L1 -6136 651 135 1793 203 41 28 chr10 62638873 62639404 -77677361 - pTR5 LTR ERV1 -1151 1287 750 13900 104 35 8 chr10 62639404 62641436 -77675329 - L1P LINE L1 -4029 2117 31 11426 55 6 1 chr10 62641431 62643288 -77673477 + L1P2 LINE L1 3906 5769 -385 * 300 234 39 0 chr10 62643920 62643997 -77672768 + MER103 DNA DNA 34 113 -53 212 220 186 0 chr10 62645772 62645831 -77670934 + L2 LINE L2 3229 3298 -15 193 71 0 48 chr10 62646416 62646458 -77670307 + (TTAA)n Simple_repeat Simple_repeat 3 42 0 1472 285 116 32 chr10 62646933 62647350 -77669415 + L2 LINE L2 2241 2622 -691 1797 169 21 3 chr10 62647350 62647634 -77669131 - AluJo SINE Alu -19 293 5 1472 285 116 32 chr10 62647634 62648205 -77668560 + L2 LINE L2 2622 3311 -2 2167 100 0 32 chr10 62648659 62648969 -77667796 - AluSq SINE Alu -13 300 1 987 209 82 65 chr10 62649307 62649599 -77667166 + AluJo SINE Alu 3 299 -3 21 36 0 0 chr10 62649876 62649904 -77666861 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr10 62650560 62650585 -77666180 + AT_rich Low_complexity Low_complexity 1 25 0 376 117 21 32 chr10 62651129 62651223 -77665542 + (TA)n Simple_repeat Simple_repeat 1 93 0 836 108 0 3 chr10 62651234 62651367 -77665398 - L1P LINE L1 -1505 4641 4511 387 0 0 0 chr10 62651492 62651535 -77665230 + (TTA)n Simple_repeat Simple_repeat 3 45 0 11717 77 15 8 chr10 62651535 62653920 -77662845 - L1PA7 LINE L1 -18 6136 3742 488 250 49 21 chr10 62654423 62654567 -77662198 + MIR SINE MIR 93 240 -22 23 33 0 0 chr10 62654567 62654597 -77662168 + AT_rich Low_complexity Low_complexity 1 30 0 906 211 13 69 chr10 62654796 62655028 -77661737 + MER20 DNA MER1_type 1 219 0 24 67 0 0 chr10 62656289 62656334 -77660431 + AT_rich Low_complexity Low_complexity 1 45 0 192 274 105 11 chr10 62658079 62658174 -77658591 + MIR SINE MIR 34 137 -71 196 316 40 26 chr10 62660076 62660152 -77656613 + L2 LINE L2 3227 3303 -10 282 29 0 0 chr10 62660475 62660510 -77656255 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 284 360 39 35 chr10 62660737 62660940 -77655825 - L2 LINE L2 -839 2475 2272 234 386 29 29 chr10 62661140 62661311 -77655454 - L2 LINE L2 -231 3041 2871 223 403 0 0 chr10 62661350 62661422 -77655343 - L2 LINE L2 -99 3173 3102 343 359 47 63 chr10 62662066 62662621 -77654144 - L2 LINE L2 -400 2914 2369 323 248 69 10 chr10 62662648 62662749 -77654016 - L1MC4 LINE L1 -1340 6702 6596 957 310 104 15 chr10 62663954 62664550 -77652215 - L1MC4 LINE L1 -518 5648 5270 22 35 0 0 chr10 62664755 62664784 -77651981 + AT_rich Low_complexity Low_complexity 1 29 0 280 301 94 49 chr10 62664916 62665587 -77651178 - L1MC4 LINE L1 -1312 4834 4134 552 277 47 18 chr10 62665670 62665944 -77650821 - L1M4 LINE L1 -1005 5141 4860 225 283 0 0 chr10 62670428 62670481 -77646284 + AluSc SINE Alu 134 186 -113 206 319 11 21 chr10 62670592 62670686 -77646079 + MIR SINE MIR 67 159 -103 888 209 45 10 chr10 62672049 62672250 -77644515 + MER3 DNA MER1_type 2 209 0 327 314 63 46 chr10 62672463 62672638 -77644127 - MIR SINE MIR -32 230 53 358 283 98 0 chr10 62673485 62673577 -77643188 + L2 LINE L2 3210 3310 -3 898 342 113 38 chr10 62673849 62674556 -77642209 + L3 LINE CR1 1 760 -817 271 350 32 45 chr10 62674590 62674747 -77642018 + L3 LINE CR1 862 1016 -561 577 332 60 9 chr10 62674886 62675103 -77641662 - MIR SINE MIR -34 228 1 877 347 78 32 chr10 62675127 62675651 -77641114 + L3 LINE CR1 1030 1577 0 374 312 4 87 chr10 62675772 62676003 -77640762 + MIR SINE MIR 51 262 0 373 325 62 6 chr10 62676010 62676170 -77640595 + MIR SINE MIR 84 252 -10 436 266 54 54 chr10 62677262 62677484 -77639281 + L1ME1 LINE L1 -285 4294967232 -6610 1952 208 53 65 chr10 62677495 62678004 -77638761 - MER67D LTR ERV1 -11 503 1 1549 240 80 78 chr10 62678619 62679373 -77637392 + L1ME1 LINE L1 1030 1887 -4757 2685 139 9 27 chr10 62679380 62679827 -77636938 - Tigger2 DNA MER2_type 0 2718 2280 356 123 18 0 chr10 62679836 62679893 -77636872 - Tigger2 DNA MER2_type -2659 59 2 719 284 13 58 chr10 62680056 62680454 -77636311 + L1ME1 LINE L1 2010 2389 -4436 543 232 54 60 chr10 62680523 62680811 -77635954 + L1ME1 LINE L1 2377 2706 -3982 2112 179 62 14 chr10 62680822 62681259 -77635506 + MLT1C LTR MaLR 10 467 0 8678 241 49 33 chr10 62681259 62682874 -77633891 + L1ME1 LINE L1 2664 4252 -2412 1103 214 60 21 chr10 62682874 62683159 -77633606 + AluJo SINE Alu 1 296 -6 8678 241 49 33 chr10 62683159 62684394 -77632371 + L1ME1 LINE L1 4252 5596 -1068 2294 136 5 16 chr10 62684394 62684762 -77632003 - THE1B LTR MaLR 0 364 1 8678 241 49 33 chr10 62684762 62685844 -77630921 + L1ME1 LINE L1 5596 6659 -5 23 33 0 0 chr10 62686605 62686635 -77630130 + AT_rich Low_complexity Low_complexity 1 30 0 245 284 11 57 chr10 62686770 62686858 -77629907 + L2 LINE L2 3189 3272 0 216 318 84 38 chr10 62689502 62689660 -77627105 - MIR SINE MIR -55 207 44 923 251 3 41 chr10 62689854 62690145 -77626620 + L1M4 LINE L1 4124 4403 -1743 755 177 41 7 chr10 62690150 62690297 -77626468 + L1MC1 LINE L1 6169 6320 -13 33 90 0 0 chr10 62690406 62690495 -77626270 + AT_rich Low_complexity Low_complexity 1 89 0 2067 164 8 5 chr10 62691132 62691503 -77625262 - L1PA16 LINE L1 0 6166 5795 216 67 0 0 chr10 62691505 62691535 -77625230 + (TG)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr10 62692059 62692082 -77624683 + AT_rich Low_complexity Low_complexity 1 23 0 432 305 28 40 chr10 62693225 62693445 -77623320 + MIR SINE MIR 10 225 -37 1831 153 3 0 chr10 62694604 62694891 -77621874 - AluSc SINE Alu -21 288 1 1135 238 129 6 chr10 62696390 62696730 -77620035 - MLT1B LTR MaLR 0 390 9 191 260 20 0 chr10 62696770 62696820 -77619945 + MIR SINE MIR 212 262 0 1960 146 3 3 chr10 62696916 62697225 -77619540 + AluSx SINE Alu 3 311 -1 597 242 147 5 chr10 62699008 62699200 -77617565 + MIR SINE MIR 35 251 -11 2090 133 0 0 chr10 62699370 62699670 -77617095 + AluSx SINE Alu 1 300 -12 185 346 85 104 chr10 62699843 62700240 -77616525 + L2 LINE L2 2812 3200 -72 1251 207 69 36 chr10 62700240 62700573 -77616192 + MER2 DNA MER2_type 1 344 0 185 346 85 104 chr10 62700573 62700635 -77616130 + L2 LINE L2 3200 3262 -10 233 206 0 32 chr10 62701517 62701580 -77615185 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 2047 88 3 46 chr10 62702695 62703002 -77613763 + AluY SINE Alu 1 294 -17 25 0 0 0 chr10 62704170 62704195 -77612570 + AT_rich Low_complexity Low_complexity 1 25 0 223 305 106 28 chr10 62704368 62704509 -77612256 + MIR SINE MIR 111 262 0 360 303 77 0 chr10 62704531 62704686 -77612079 + MIR SINE MIR 84 250 -12 258 136 0 0 chr10 62704703 62704747 -77612018 + (CAT)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr10 62705194 62705217 -77611548 + AT_rich Low_complexity Low_complexity 1 23 0 922 123 12 18 chr10 62706119 62706243 -77610522 - Tigger1 DNA MER2_type -55 2363 2239 2425 68 3 3 chr10 62706243 62706552 -77610213 + AluSc SINE Alu 1 309 0 922 123 12 18 chr10 62706552 62706590 -77610175 - Tigger1 DNA MER2_type -179 2239 2202 409 248 74 0 chr10 62706596 62706717 -77610048 - Tigger1 DNA MER2_type -2269 149 20 568 237 51 120 chr10 62707454 62707804 -77608961 + L2 LINE L2 2983 3308 -5 379 291 65 18 chr10 62708016 62708247 -77608518 + MIR SINE MIR 20 262 0 186 118 0 0 chr10 62708306 62708340 -77608425 + (T)n Simple_repeat Simple_repeat 1 34 0 1193 89 6 0 chr10 62708612 62708781 -77607984 + L1PA4 LINE L1 5985 6154 -1 863 73 0 0 chr10 62709041 62709150 -77607615 - AluSp/q SINE Alu -8 305 197 206 246 0 35 chr10 62709270 62709327 -77607438 - MIR SINE MIR -46 216 162 347 338 66 7 chr10 62710720 62710871 -77605894 + MIR3 SINE MIR 2 161 -47 764 160 8 0 chr10 62711201 62711332 -77605433 - FLAM_A SINE Alu 0 133 2 184 260 104 97 chr10 62711983 62712137 -77604628 - MIR SINE MIR -26 236 82 485 371 25 59 chr10 62712252 62712538 -77604227 - L2 LINE L2 -3 3269 2994 366 262 43 50 chr10 62712551 62712692 -77604073 - MER5A DNA MER1_type -4 185 46 338 289 49 56 chr10 62712578 62712720 -77604045 + MER5A DNA MER1_type 43 183 -6 * 813 183 120 37 chr10 62713376 62713567 -77603198 - MER63A DNA MER1_type 0 210 4 245 294 47 0 chr10 62713669 62713754 -77603011 - MLT1L LTR MaLR -327 288 200 875 128 5 160 chr10 62714095 62714314 -77602451 + MER5A DNA MER1_type 1 185 -4 219 69 0 0 chr10 62714413 62714442 -77602323 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 395 248 50 10 chr10 62714459 62714560 -77602205 + L2 LINE L2 2649 2753 -561 466 243 216 39 chr10 62714688 62714947 -77601818 + L2 LINE L2 3005 3309 -4 189 0 0 0 chr10 62715043 62715064 -77601701 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 445 303 139 0 chr10 62716104 62716312 -77600453 - MIR SINE MIR -6 256 20 26 0 0 0 chr10 62716347 62716373 -77600392 + AT_rich Low_complexity Low_complexity 1 26 0 252 136 68 0 chr10 62716429 62716473 -77600292 + L2 LINE L2 3263 3309 -4 1584 191 105 78 chr10 62716532 62717079 -77599686 - MLT1F1 LTR MaLR -2 565 2 333 304 35 9 chr10 62717250 62717365 -77599400 + MIR SINE MIR 111 228 -34 180 125 0 0 chr10 62718896 62718928 -77597837 + (TGGG)n Simple_repeat Simple_repeat 3 34 0 490 310 86 28 chr10 62719047 62719373 -77597392 + L3 LINE CR1 1051 1395 -182 207 301 26 62 chr10 62719385 62719498 -77597267 - L3 LINE CR1 -1038 539 431 248 0 0 30 chr10 62719533 62719566 -77597199 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1787 180 48 5 chr10 62719800 62720194 -77596571 + L1MB4 LINE L1 5769 6179 -1 1107 160 67 0 chr10 62720463 62720505 -77596260 + MER3 DNA MER1_type 2 40 -169 180 0 0 0 chr10 62720513 62720533 -77596232 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5596 118 20 2 chr10 62720533 62721709 -77595056 - L1PA14 LINE L1 -9 6152 4953 1107 160 67 0 chr10 62721709 62721860 -77594905 + MER3 DNA MER1_type 40 208 -1 240 343 63 2 chr10 62723088 62723205 -77593560 - MIR SINE MIR -57 151 34 408 215 227 13 chr10 62723667 62723868 -77592897 - MER106B DNA MER1_type 0 1059 1 678 225 117 56 chr10 62723902 62724042 -77592723 + MIR SINE MIR 1 160 -102 2135 130 0 0 chr10 62724042 62724349 -77592416 + AluSc SINE Alu 1 307 -2 678 225 117 56 chr10 62724349 62724421 -77592344 + MIR SINE MIR 160 226 -36 424 279 84 32 chr10 62726663 62726817 -77589948 - MIR SINE MIR -94 168 7 23 33 0 0 chr10 62727645 62727675 -77589090 + AT_rich Low_complexity Low_complexity 1 30 0 2032 134 7 3 chr10 62727764 62728062 -77588703 + AluSq SINE Alu 1 299 -14 322 301 66 35 chr10 62728135 62728394 -77588371 - L1MC5 LINE L1 -54 7907 7641 235 298 53 13 chr10 62728503 62728654 -77588111 + MER103 DNA DNA 2 158 -8 2684 170 33 6 chr10 62729214 62729851 -77586914 - L1P LINE L1 -739 5426 4767 3869 132 80 10 chr10 62729851 62730527 -77586238 + L1PA16 LINE L1 5443 6166 0 38 39 0 0 chr10 62730527 62730579 -77586186 + AT_rich Low_complexity Low_complexity 1 52 0 249 293 20 50 chr10 62730691 62730790 -77585975 + MER5C DNA MER1_type 1 96 -228 427 137 147 0 chr10 62730825 62730920 -77585845 + MER5C DNA MER1_type 212 320 -4 342 0 0 0 chr10 62731644 62731682 -77585083 + (T)n Simple_repeat Simple_repeat 1 38 0 253 234 58 62 chr10 62731816 62731950 -77584815 + MIR SINE MIR 47 181 -67 235 354 47 31 chr10 62732756 62732948 -77583817 + MIR3 SINE MIR 4 198 -10 297 344 90 8 chr10 62733001 62733123 -77583642 + MIR SINE MIR 61 192 -70 615 231 91 28 chr10 62733530 62733725 -77583040 + MIR SINE MIR 40 249 -13 1609 176 29 29 chr10 62733743 62734055 -77582710 - AluJo SINE Alu 0 312 1 632 271 105 26 chr10 62734286 62734515 -77582250 - MIR SINE MIR -14 248 2 22 0 0 0 chr10 62735411 62735433 -77581332 + AT_rich Low_complexity Low_complexity 1 22 0 983 285 76 48 chr10 62735718 62736013 -77580752 - L2 LINE L2 -1 3312 3000 1951 126 10 7 chr10 62736013 62736314 -77580451 + AluSx SINE Alu 1 302 -10 983 285 76 48 chr10 62736314 62736439 -77580326 - L2 LINE L2 -313 3000 2880 500 293 20 0 chr10 62736432 62736579 -77580186 - L2 LINE L2 -603 2711 2562 * 3412 271 123 20 chr10 62736757 62739115 -77577650 - L1MDa LINE L1 -1507 5033 2420 277 252 77 79 chr10 62739326 62739661 -77577104 - L1M2 LINE L1 -4253 2288 1749 13091 178 44 28 chr10 62739707 62743318 -77573447 - L1MA9 LINE L1 -5 7267 3595 1985 144 10 3 chr10 62743318 62743617 -77573148 - AluSx SINE Alu -11 301 1 13091 178 44 28 chr10 62743617 62744001 -77572764 - L1MA9 LINE L1 -3677 3595 3218 346 273 56 21 chr10 62744016 62744159 -77572606 - L1MA9 LINE L1 -6377 653 506 284 296 24 32 chr10 62744259 62744384 -77572381 - L1ME LINE L1 -5941 129 6 374 314 166 0 chr10 62744687 62744862 -77571903 + MIR SINE MIR 49 252 -10 3216 239 78 88 chr10 62745546 62746636 -77570129 + L1MC4 LINE L1 6707 7807 0 582 360 16 8 chr10 62746758 62747008 -77569757 + MIR SINE MIR 1 252 -10 5013 213 23 22 chr10 62747887 62749982 -77566783 - L1MC1 LINE L1 -343 5973 3876 615 187 65 13 chr10 62749984 62750139 -77566626 - L1MC1 LINE L1 -2196 3933 3771 547 238 26 74 chr10 62751204 62751473 -77565292 - MER112 DNA MER1_type 0 256 1 399 328 46 35 chr10 62751561 62751845 -77564920 - L2 LINE L2 -31 3282 2996 568 242 65 7 chr10 62752712 62752865 -77563900 - L1MC1 LINE L1 -5956 163 2 9652 26 1 0 chr10 62753204 62754339 -77562426 - L1P LINE L1 -1193 4953 3818 6260 23 0 0 chr10 62754339 62755064 -77561701 + L1PA2 LINE L1 5427 6153 -2 414 205 12 0 chr10 62755533 62755616 -77561149 - MER58A DNA MER1_type 0 224 141 3025 189 11 4 chr10 62755635 62756170 -77560595 + Tigger7 DNA MER2_type 9 547 -1940 646 152 30 53 chr10 62756163 62756295 -77560470 + Tigger7 DNA MER2_type 2359 2487 0 * 592 242 68 0 chr10 62756296 62756428 -77560337 - MER58A DNA MER1_type 0 142 2 519 270 123 65 chr10 62757043 62757320 -77559445 - L3 LINE CR1 -107 1470 1168 995 228 53 56 chr10 62757320 62757658 -77559107 - MER102b DNA MER1_type -1 340 4 519 270 123 65 chr10 62757658 62757721 -77559044 - L3 LINE CR1 -409 1168 1110 28 29 0 0 chr10 62758171 62758206 -77558559 + AT_rich Low_complexity Low_complexity 1 35 0 246 306 27 27 chr10 62758970 62759081 -77557684 - Charlie8 DNA MER1_type -2150 267 157 195 148 33 16 chr10 62759852 62759913 -77556852 + (TA)n Simple_repeat Simple_repeat 2 63 0 3725 225 72 41 chr10 62759919 62760385 -77556380 + L1MD2 LINE L1 5154 5604 -2438 495 76 0 0 chr10 62760385 62760451 -77556314 + L1PA4 LINE L1 6082 6147 -8 3725 225 72 41 chr10 62760451 62761100 -77555665 + L1MD2 LINE L1 5604 6231 -1811 2385 152 39 5 chr10 62761100 62761514 -77555251 + MSTA LTR MaLR 1 428 0 3725 225 72 41 chr10 62761514 62761541 -77555224 + L1MD2 LINE L1 6231 8037 -5 319 312 19 63 chr10 62761676 62761881 -77554884 + MIR SINE MIR 67 262 0 1604 314 65 48 chr10 62762090 62762509 -77554256 + L2 LINE L2 1918 2328 -986 814 332 91 16 chr10 62762509 62762689 -77554076 - LTR33 LTR ERVL 0 521 356 243 0 0 0 chr10 62762689 62762716 -77554049 + (CA)n Simple_repeat Simple_repeat 2 28 0 814 332 91 16 chr10 62762716 62763020 -77553745 - LTR33 LTR ERVL -165 356 1 1604 314 65 48 chr10 62763020 62763367 -77553398 + L2 LINE L2 2328 2709 -605 1788 231 34 18 chr10 62763367 62763864 -77552901 + MLT1D LTR MaLR 1 505 0 1604 314 65 48 chr10 62763864 62764103 -77552662 + L2 LINE L2 2709 2942 -372 1473 268 53 32 chr10 62764160 62764731 -77552034 - MLT1E LTR MaLR -3 590 26 1781 160 3 11 chr10 62764732 62765019 -77551746 + AluJb SINE Alu 3 287 -25 31 26 0 0 chr10 62765019 62765057 -77551708 + AT_rich Low_complexity Low_complexity 1 38 0 387 267 111 7 chr10 62765694 62765829 -77550936 - MLT1D LTR MaLR 0 467 319 623 207 22 22 chr10 62765849 62765984 -77550781 - MLT1D LTR MaLR -370 135 1 247 367 33 25 chr10 62766085 62766205 -77550560 + L2 LINE L2 3134 3254 -18 255 125 0 0 chr10 62767300 62767340 -77549425 + (CA)n Simple_repeat Simple_repeat 1 40 0 1118 184 85 117 chr10 62767600 62767704 -77549061 + L1ME2 LINE L1 5724 5830 -334 1850 160 14 0 chr10 62767704 62767830 -77548935 + AluJb SINE Alu 1 124 -188 192 40 0 0 chr10 62767830 62767855 -77548910 + (CA)n Simple_repeat Simple_repeat 2 26 0 1850 160 14 0 chr10 62767855 62768016 -77548749 + AluJb SINE Alu 124 292 -20 1118 184 85 117 chr10 62768016 62768072 -77548693 + L1ME2 LINE L1 5830 5886 -278 1962 146 0 0 chr10 62768072 62768360 -77548405 + AluSx SINE Alu 1 288 -24 1118 184 85 117 chr10 62768360 62768643 -77548122 + L1ME2 LINE L1 5886 6154 -10 670 267 28 0 chr10 62768904 62769084 -77547681 + MIR SINE MIR 72 256 -6 194 305 38 57 chr10 62769281 62769386 -77547379 + MIR SINE MIR 47 149 -59 614 194 50 21 chr10 62769386 62769598 -77547167 + L1MB4 LINE L1 5949 6179 -1 349 346 0 8 chr10 62769643 62769770 -77546995 - L2 LINE L2 0 3313 3188 181 364 86 19 chr10 62769929 62770091 -77546674 - MIR SINE MIR -37 225 53 239 293 98 0 chr10 62770833 62770956 -77545809 - L1M4 LINE L1 -1957 4189 4055 1827 93 0 0 chr10 62771003 62771240 -77545525 - AluSg SINE Alu -49 261 25 457 253 18 18 chr10 62771296 62771466 -77545299 - L1M4 LINE L1 -2166 3980 3811 878 140 0 6 chr10 62771928 62772085 -77544680 + (GGAA)n Simple_repeat Simple_repeat 3 158 0 223 190 40 30 chr10 62773896 62773996 -77542769 + (TATAA)n Simple_repeat Simple_repeat 4 104 0 * 224 207 45 18 chr10 62773935 62774046 -77542719 + (TA)n Simple_repeat Simple_repeat 1 114 0 29 28 0 0 chr10 62774112 62774148 -77542617 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr10 62775386 62775408 -77541357 + AT_rich Low_complexity Low_complexity 1 22 0 908 224 41 25 chr10 62776071 62776414 -77540351 + MER34C LTR ERV1 59 450 -135 462 152 86 19 chr10 62776480 62776585 -77540180 + MER31-int LTR ERV1 877 988 -3948 1988 175 15 70 chr10 62776638 62777095 -77539670 + LTR9 LTR ERV1 1 432 -180 282 216 0 0 chr10 62778936 62779010 -77537755 + G-rich Low_complexity Low_complexity 1 74 0 490 89 83 18 chr10 62779096 62779264 -77537501 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 485 51 5 107 chr10 62779283 62779479 -77537286 + (TA)n Simple_repeat Simple_repeat 2 177 0 706 35 0 96 chr10 62779508 62779829 -77536936 + (TA)n Simple_repeat Simple_repeat 1 290 0 305 361 98 8 chr10 62779882 62780004 -77536761 + MIR SINE MIR 1 134 -74 373 246 31 11 chr10 62780022 62780142 -77536623 + MIR SINE MIR 24 151 -57 678 294 169 69 chr10 62780154 62780532 -77536233 - L2 LINE L2 0 3272 2857 189 135 81 0 chr10 62780537 62780574 -77536191 + MIR SINE MIR 158 197 -65 23 33 0 0 chr10 62780687 62780717 -77536048 + AT_rich Low_complexity Low_complexity 1 30 0 2167 109 7 0 chr10 62780818 62781122 -77535643 + AluSx SINE Alu 1 306 -6 590 162 17 17 chr10 62781122 62781239 -77535526 + L1PA15 LINE L1 6033 6149 -16 235 300 95 58 chr10 62781543 62781786 -77534979 - L3 LINE CR1 -17 1560 1309 381 261 65 0 chr10 62781985 62782077 -77534688 + L2 LINE L2 3184 3281 -32 208 195 24 0 chr10 62782764 62782805 -77533960 - MIR3 SINE MIR -17 191 150 3488 283 115 37 chr10 62782928 62784714 -77532051 + L2 LINE L2 1256 3178 -135 2275 106 0 3 chr10 62784927 62785229 -77531536 - AluSx SINE Alu -11 301 1 328 256 44 22 chr10 62785388 62785478 -77531287 + MIR SINE MIR 106 197 -65 183 156 11 56 chr10 62787097 62787187 -77529578 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 1273 204 71 0 chr10 62789838 62790118 -77526647 - AluJo SINE Alu -11 301 2 270 164 18 0 chr10 62790152 62790207 -77526558 - MLT1K LTR MaLR -20 568 513 234 150 100 0 chr10 62790377 62790417 -77526348 - Alu SINE Alu -134 166 123 192 303 41 111 chr10 62790970 62791214 -77525551 + L3 LINE CR1 1132 1358 -219 30 27 0 0 chr10 62791219 62791256 -77525509 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 62792336 62792357 -77524408 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr10 62792599 62792635 -77524130 + AT_rich Low_complexity Low_complexity 1 36 0 1016 106 26 13 chr10 62793134 62793285 -77523480 - AluSg/x SINE Alu -23 289 137 2512 65 0 3 chr10 62794019 62794325 -77522440 + AluY SINE Alu 2 306 -5 2255 213 47 19 chr10 62794558 62795085 -77521680 - MER67A LTR ERV1 0 543 2 393 306 142 58 chr10 62795096 62795626 -77521139 + L2 LINE L2 2704 3310 -3 251 276 60 37 chr10 62795974 62796108 -77520657 + MIR SINE MIR 66 202 -60 1913 144 43 0 chr10 62796341 62796640 -77520125 + AluJb SINE Alu 1 312 0 22 0 0 0 chr10 62797965 62797987 -77518778 + AT_rich Low_complexity Low_complexity 1 22 0 312 239 94 34 chr10 62798189 62798367 -77518398 + MIR SINE MIR 47 233 -29 2243 110 0 16 chr10 62798467 62798785 -77517980 + AluSq SINE Alu 1 313 0 794 283 312 14 chr10 62799516 62799930 -77516835 + L2 LINE L2 708 1244 -2070 4548 197 66 32 chr10 62800034 62800958 -77515807 - Charlie1a DNA MER1_type -1681 1080 116 2064 66 0 4 chr10 62800958 62801217 -77515548 - AluY SINE Alu -15 296 39 4548 197 66 32 chr10 62801217 62801337 -77515428 - Charlie1a DNA MER1_type -2645 116 1 561 274 77 16 chr10 62801893 62802108 -77514657 + MIR SINE MIR 21 252 -10 2550 219 48 20 chr10 62802180 62803127 -77513638 + L1MEc LINE L1 2048 2988 -3227 2308 19 24 0 chr10 62803131 62803448 -77513317 - L1P LINE L1 -726 5429 5108 3394 36 0 5 chr10 62803448 62803865 -77512900 + L1PA4 LINE L1 5738 6152 -3 1164 195 153 26 chr10 62803977 62804325 -77512440 + MLT1F LTR MaLR 118 568 -27 216 307 57 11 chr10 62804406 62804494 -77512271 - L2 LINE L2 -458 2856 2765 425 277 148 15 chr10 62806329 62806531 -77510234 + MIR SINE MIR 33 261 -1 1353 68 6 23 chr10 62806776 62806952 -77509813 - AluSc SINE Alu -20 289 117 660 98 0 0 chr10 62807784 62807886 -77508879 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 237 289 22 11 chr10 62807890 62807980 -77508785 + CT-rich Low_complexity Low_complexity 2 92 0 24 0 0 0 chr10 62809294 62809318 -77507447 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 62809897 62809920 -77506845 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 62810270 62810291 -77506474 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 62810371 62810392 -77506373 + AT_rich Low_complexity Low_complexity 1 21 0 793 236 181 24 chr10 62810670 62810958 -77505807 - MLT1E2 LTR MaLR -230 396 64 23 0 0 0 chr10 62811166 62811189 -77505576 + AT_rich Low_complexity Low_complexity 1 23 0 432 275 106 24 chr10 62811260 62811467 -77505298 + MIR SINE MIR 9 232 -30 1571 161 17 50 chr10 62812002 62812300 -77504465 + AluJo SINE Alu 1 288 -24 5697 220 54 33 chr10 62812676 62813626 -77503139 + L1MC/D LINE L1 3588 4517 -1702 1860 154 7 3 chr10 62813626 62813925 -77502840 + AluJb SINE Alu 1 300 -12 5697 220 54 33 chr10 62813925 62814825 -77501940 + L1MC/D LINE L1 4517 5474 -745 2751 153 70 2 chr10 62814837 62815335 -77501430 + L1MC3 LINE L1 6393 6924 -861 1048 191 132 10 chr10 62815327 62815630 -77501135 - L1MC3 LINE L1 -533 7252 6913 * 1678 225 57 1 chr10 62815630 62816042 -77500723 - L1MC4a LINE L1 -991 6817 6357 677 262 122 0 chr10 62816086 62816275 -77500490 + MIR SINE MIR 2 167 -95 2374 137 26 30 chr10 62816275 62816458 -77500307 + MSTB1 LTR MaLR 1 183 -249 2147 102 0 0 chr10 62816458 62816783 -77499982 - AluSg SINE Alu 0 325 1 2374 137 26 30 chr10 62816783 62816995 -77499770 + MSTB1 LTR MaLR 183 397 -35 2178 128 3 3 chr10 62816995 62817307 -77499458 - AluSx SINE Alu 0 312 1 2374 137 26 30 chr10 62817307 62817339 -77499426 + MSTB1 LTR MaLR 397 428 -4 677 262 122 0 chr10 62817339 62817370 -77499395 + MIR SINE MIR 167 249 -13 471 261 0 84 chr10 62818001 62818143 -77498622 - L2 LINE L2 0 3313 3184 769 238 86 22 chr10 62818154 62818619 -77498146 - MLT1H1 LTR MaLR -10 545 4 2506 261 47 14 chr10 62818657 62818782 -77497983 - L2 LINE L2 -177 3136 3017 2395 81 0 0 chr10 62818782 62819089 -77497676 + AluY SINE Alu 1 307 -4 2506 261 47 14 chr10 62819089 62819791 -77496974 - L2 LINE L2 -296 3017 2277 3113 135 28 60 chr10 62819912 62820566 -77496199 - L1MB3 LINE L1 -187 5996 5364 375 116 14 0 chr10 62820641 62820710 -77496055 - L1MB3 LINE L1 -826 5357 5288 1798 168 0 10 chr10 62821701 62821992 -77494773 + AluJo SINE Alu 1 288 -24 366 304 30 11 chr10 62822081 62822344 -77494421 - L1M4c LINE L1 -2659 3723 3456 238 264 80 20 chr10 62822409 62822763 -77494002 - L1M4c LINE L1 -3579 2803 2323 707 295 132 28 chr10 62822990 62823572 -77493193 - L1M4c LINE L1 -4578 1985 1201 227 108 0 0 chr10 62824264 62824301 -77492464 - L1MC4 LINE L1 -6 8036 8000 685 199 8 15 chr10 62824314 62824445 -77492320 - FLAM_A SINE Alu -3 130 1 658 271 79 10 chr10 62824461 62824753 -77492012 - L1MC4 LINE L1 -140 7902 7591 1998 130 0 0 chr10 62825099 62825375 -77491390 - AluSx SINE Alu -2 310 35 22 70 0 0 chr10 62828188 62828231 -77488534 + AT_rich Low_complexity Low_complexity 1 43 0 637 225 111 29 chr10 62828318 62828598 -77488167 - L1MC4 LINE L1 -6 8036 7734 544 228 81 71 chr10 62828917 62829298 -77487467 - L1MC4 LINE L1 -11 8031 7647 21 57 0 0 chr10 62829345 62829380 -77487385 + AT_rich Low_complexity Low_complexity 1 35 0 377 242 189 39 chr10 62829414 62829699 -77487066 - L1MC4 LINE L1 -621 7421 7094 1948 148 0 3 chr10 62830024 62830341 -77486424 - AluJb SINE Alu 0 312 1 1204 123 0 17 chr10 62830351 62830554 -77486211 - AluSg/x SINE Alu 0 310 119 336 68 8 37 chr10 62830644 62830701 -77486064 - AluJb SINE Alu -177 125 77 2014 128 0 17 chr10 62830797 62831095 -77485670 + AluY SINE Alu 1 293 -18 36 0 0 0 chr10 62831969 62832005 -77484760 + AT_rich Low_complexity Low_complexity 1 36 0 183 291 128 0 chr10 62832183 62832269 -77484496 - MIR SINE MIR -50 212 116 22 0 0 0 chr10 62832302 62832324 -77484441 + AT_rich Low_complexity Low_complexity 1 22 0 1863 205 106 104 chr10 62832411 62832657 -77484108 - L1MC5 LINE L1 -184 7777 7533 4701 75 8 3 chr10 62832657 62833285 -77483480 + L1PA13 LINE L1 5514 6144 -19 1863 205 106 104 chr10 62833285 62833467 -77483298 - L1MC5 LINE L1 -428 7533 7353 2231 111 7 0 chr10 62833467 62833774 -77482991 - AluSp SINE Alu -4 309 1 1863 205 106 104 chr10 62833774 62834062 -77482703 - L1MC5 LINE L1 -608 7353 7067 264 77 0 0 chr10 62834062 62834101 -77482664 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1863 205 106 104 chr10 62834101 62834466 -77482299 - L1MC5 LINE L1 -894 7067 6692 22 35 0 0 chr10 62834571 62834600 -77482165 + AT_rich Low_complexity Low_complexity 1 29 0 246 350 70 51 chr10 62835003 62835160 -77481605 - L2 LINE L2 0 3313 3154 885 205 209 0 chr10 62836553 62836816 -77479949 + MER33 DNA MER1_type 7 324 0 28 48 0 0 chr10 62837114 62837156 -77479609 + AT_rich Low_complexity Low_complexity 1 42 0 1062 181 106 0 chr10 62838613 62838812 -77477953 - AluSg/x SINE Alu -9 303 84 448 169 0 0 chr10 62838862 62838939 -77477826 - L1MB4 LINE L1 -66 6114 6038 228 176 109 0 chr10 62838945 62839030 -77477735 + MSTA LTR MaLR 11 106 -320 654 164 27 9 chr10 62839645 62839755 -77477010 + FLAM_C SINE Alu 6 117 -26 369 0 0 0 chr10 62839755 62839796 -77476969 + (CA)n Simple_repeat Simple_repeat 2 42 0 1589 147 19 51 chr10 62840646 62840767 -77475998 + AluJo SINE Alu 1 124 -188 351 0 0 0 chr10 62840767 62840806 -77475959 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1589 147 19 51 chr10 62840806 62840998 -77475767 + AluJo SINE Alu 124 304 -8 935 127 57 25 chr10 62841820 62841977 -77474788 - AluSg/x SINE Alu -9 303 142 26 50 0 0 chr10 62842472 62842512 -77474253 + AT_rich Low_complexity Low_complexity 1 40 0 1178 172 5 23 chr10 62842968 62843183 -77473582 + AluJo SINE Alu 87 297 -15 25 31 0 0 chr10 62843831 62843863 -77472902 + GC_rich Low_complexity Low_complexity 1 32 0 389 369 45 29 chr10 62844371 62844683 -77472082 - MLT1K LTR MaLR -235 353 37 287 333 11 0 chr10 62845041 62845128 -77471637 + LTR50 LTR ERVL 387 474 -321 1129 108 38 0 chr10 62846158 62846370 -77470395 + AluSp SINE Alu 149 366 0 611 205 0 0 chr10 62846473 62846590 -77470175 - AluSg/x SINE Alu -10 302 186 24 53 0 0 chr10 62847015 62847053 -77469712 + AT_rich Low_complexity Low_complexity 1 38 0 240 275 33 55 chr10 62848320 62848411 -77468354 - MIR SINE MIR -127 135 47 451 355 44 52 chr10 62850400 62850648 -77466117 - L1M2 LINE L1 -5896 953 708 25 31 0 0 chr10 62850965 62850997 -77465768 + AT_rich Low_complexity Low_complexity 1 32 0 511 270 68 0 chr10 62851020 62851183 -77465582 - MER5B DNA MER1_type -4 174 1 1482 211 41 40 chr10 62852787 62853281 -77463484 + L1MD3 LINE L1 7160 7829 -151 41 82 0 0 chr10 62853298 62853395 -77463370 + AT_rich Low_complexity Low_complexity 1 97 0 227 191 0 0 chr10 62853398 62853445 -77463320 + L1MC4 LINE L1 7762 7808 -234 336 274 40 160 chr10 62854078 62854608 -77462157 + L1M2 LINE L1 652 1117 -5732 1383 208 11 36 chr10 62855598 62855963 -77460802 + L1MA8 LINE L1 5822 6177 -114 1048 68 5 47 chr10 62856127 62856317 -77460448 + AluY SINE Alu 1 182 -129 303 307 10 0 chr10 62856699 62856800 -77459965 - MLT1L LTR MaLR -372 243 142 979 267 98 6 chr10 62856967 62857282 -77459483 - MLT1A1 LTR MaLR -2 363 20 2312 97 3 16 chr10 62858834 62859143 -77457622 - AluSp SINE Alu -8 305 1 326 264 39 23 chr10 62859369 62859498 -77457267 + MIR SINE MIR 96 226 -36 1620 144 42 83 chr10 62861034 62861347 -77455418 - AluJb SINE Alu -12 300 1 843 167 0 96 chr10 62862165 62862458 -77454307 + AluJo SINE Alu 1 265 -47 772 156 0 0 chr10 62862776 62862898 -77453867 + AluSg/x SINE Alu 178 299 -13 229 244 293 16 chr10 62863176 62863299 -77453466 + MIR SINE MIR 50 206 -56 660 210 48 89 chr10 62863505 62863819 -77452946 - AluSx SINE Alu 0 312 12 230 289 40 13 chr10 62863990 62864066 -77452699 + L2 LINE L2 3236 3313 0 556 216 144 6 chr10 62864468 62864635 -77452130 - MER3 DNA MER1_type 0 209 20 715 258 0 0 chr10 62865742 62865901 -77450864 - FRAM SINE Alu -6 160 2 1235 92 0 58 chr10 62865905 62866079 -77450686 - AluSp SINE Alu -20 293 130 308 203 78 109 chr10 62866228 62866356 -77450409 - MIR3 SINE MIR -1 207 84 573 240 46 29 chr10 62866394 62866569 -77450196 - MER5B DNA MER1_type 0 178 1 673 318 42 8 chr10 62866981 62867358 -77449407 - L1MEc LINE L1 -2413 3802 3413 317 306 61 54 chr10 62867560 62867707 -77449058 - L1MEc LINE L1 -3885 2511 2364 2166 122 0 3 chr10 62867815 62868119 -77448646 - AluSc SINE Alu -1 308 6 1555 143 0 8 chr10 62868444 62868689 -77448076 + AluJo SINE Alu 68 310 -2 1693 152 0 51 chr10 62870437 62870752 -77446013 - AluSg SINE Alu -1 309 11 1066 258 168 5 chr10 62870958 62871393 -77445372 + LTR33 LTR ERVL 15 520 -1 1991 140 40 12 chr10 62872490 62872818 -77443947 - MER1B DNA MER1_type 0 337 1 192 271 34 0 chr10 62873167 62873226 -77443539 - MIR SINE MIR 0 262 202 2341 79 16 16 chr10 62873963 62874266 -77442499 + AluY SINE Alu 1 303 -8 1991 127 4 0 chr10 62874842 62875117 -77441648 - AluSx SINE Alu -33 279 4 22 0 0 0 chr10 62875412 62875434 -77441331 + AT_rich Low_complexity Low_complexity 1 22 0 267 192 77 0 chr10 62875560 62875612 -77441153 + MLT1D LTR MaLR 1 56 -449 1483 219 73 6 chr10 62875679 62876021 -77440744 + MLT1A1 LTR MaLR 1 365 0 633 191 7 64 chr10 62880004 62880145 -77436620 + FLAM_A SINE Alu 1 133 0 194 216 49 78 chr10 62882193 62882295 -77434470 - L2 LINE L2 -388 2925 2827 548 243 32 65 chr10 62883277 62883462 -77433303 + AluJo SINE Alu 122 300 -12 1675 119 4 0 chr10 62884835 62885062 -77431703 - AluSc SINE Alu -76 233 6 205 313 16 0 chr10 62885073 62885137 -77431628 - MER5A DNA MER1_type -124 65 1 1789 183 53 15 chr10 62885525 62885923 -77430842 - MER31A LTR ERV1 -72 413 1 1849 157 4 0 chr10 62886539 62886807 -77429958 + AluJb SINE Alu 14 282 -30 28 61 0 0 chr10 62889159 62889208 -77427557 + AT_rich Low_complexity Low_complexity 1 49 0 1323 119 55 0 chr10 62889487 62889689 -77427076 - AluSg/x SINE Alu 0 312 100 1112 203 5 0 chr10 62889920 62890127 -77426638 - AluSx SINE Alu -104 208 1 34 24 0 0 chr10 62890523 62890564 -77426201 + AT_rich Low_complexity Low_complexity 1 41 0 447 93 0 111 chr10 62890972 62891080 -77425685 - AluSg/x SINE Alu -17 292 197 417 141 78 0 chr10 62891770 62891834 -77424931 + AluSp SINE Alu 54 122 -191 392 282 110 66 chr10 62892578 62892897 -77423868 - L2 LINE L2 -348 2966 2634 252 329 14 0 chr10 62893116 62893189 -77423576 - MIR SINE MIR -116 146 73 2211 130 0 3 chr10 62894581 62894889 -77421876 - AluSx SINE Alu -5 307 1 2559 72 27 0 chr10 62895100 62895435 -77421330 + LTR14A LTR ERVK 1 344 0 183 80 0 0 chr10 62896198 62896223 -77420542 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1036 50 0 0 chr10 62896444 62896563 -77420202 + AluY SINE Alu 1 119 -192 22 0 0 0 chr10 62897969 62897991 -77418774 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 62898561 62898585 -77418180 + AT_rich Low_complexity Low_complexity 1 24 0 30 59 0 0 chr10 62898781 62898832 -77417933 + GC_rich Low_complexity Low_complexity 1 51 0 494 317 26 30 chr10 62899636 62899872 -77416893 + MIR SINE MIR 3 242 -20 211 355 97 16 chr10 62900588 62900712 -77416053 + L2 LINE L2 3122 3255 -17 218 375 51 0 chr10 62901080 62901214 -77415551 + MIR3 SINE MIR 8 152 -68 411 315 42 28 chr10 62902656 62902869 -77413896 + MIR SINE MIR 33 248 -14 375 273 64 0 chr10 62903053 62903163 -77413602 + MIR SINE MIR 16 132 -76 311 192 64 13 chr10 62903728 62903806 -77412959 - MER53 DNA DNA -4 185 104 301 293 85 30 chr10 62904349 62904483 -77412282 + MIR SINE MIR 10 149 -62 200 220 102 0 chr10 62904898 62904957 -77411808 - MIR SINE MIR -119 143 79 669 76 0 0 chr10 62906478 62906570 -77410195 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 292 284 203 30 chr10 62906888 62907085 -77409680 - MIR SINE MIR -30 232 2 911 143 21 0 chr10 62907407 62907547 -77409218 - AluJo SINE Alu -163 149 7 612 173 134 45 chr10 62907553 62907732 -77409033 - L1M4 LINE L1 -1584 4562 4368 546 238 8 0 chr10 62907724 62907846 -77408919 - L1M4 LINE L1 -2456 3690 3568 * 2162 107 3 10 chr10 62908049 62908347 -77408418 + AluSq SINE Alu 1 296 -17 2170 136 0 13 chr10 62908428 62908738 -77408027 + AluJb SINE Alu 1 306 -6 294 189 63 53 chr10 62908838 62908933 -77407832 - MER103 DNA DNA -1 165 70 275 207 52 67 chr10 62908944 62909129 -77407636 - MIR SINE MIR -2 260 10 369 125 0 47 chr10 62909544 62909608 -77407157 - FLAM SINE Alu -3 130 70 240 300 0 0 chr10 62909589 62909659 -77407106 - AluSp SINE Alu -112 191 122 * 349 309 199 22 chr10 62909767 62909948 -77406817 + MIR SINE MIR 45 257 -5 26 0 0 0 chr10 62910340 62910366 -77406399 + AT_rich Low_complexity Low_complexity 1 26 0 2369 188 19 6 chr10 62910424 62910897 -77405868 - L1PA16 LINE L1 0 6166 5688 10529 229 19 17 chr10 62910897 62914018 -77402747 - L1PA15-16 LINE L1 -976 5873 2747 1882 127 14 0 chr10 62914873 62915157 -77401608 + AluJb SINE Alu 11 298 -14 1974 127 25 32 chr10 62915771 62916085 -77400680 + AluSx SINE Alu 1 312 0 1965 85 122 4 chr10 62916108 62916378 -77400387 + AluSp SINE Alu 1 302 -11 371 231 0 56 chr10 62916383 62916491 -77400274 + L1M3 LINE L1 4282 4383 -1763 235 67 0 0 chr10 62916491 62916521 -77400244 + AluSp/q SINE Alu 256 306 0 190 0 0 0 chr10 62916521 62916542 -77400223 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1296 142 12 149 chr10 62916588 62916754 -77400011 + THE1B LTR MaLR 1 78 -286 2081 162 0 0 chr10 62916754 62917057 -77399708 - AluSx SINE Alu -9 303 1 1296 142 12 149 chr10 62917057 62917305 -77399460 + THE1B LTR MaLR 78 358 -6 386 276 188 16 chr10 62917341 62917533 -77399232 + MIR SINE MIR 35 259 -3 1373 105 6 0 chr10 62917803 62917984 -77398781 + AluSp SINE Alu 121 302 -11 555 195 0 114 chr10 62918021 62918231 -77398534 + L1M3 LINE L1 5256 5441 -727 294 0 0 61 chr10 62919415 62919464 -77397301 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 0 0 0 chr10 62920090 62920137 -77396628 + (TG)n Simple_repeat Simple_repeat 2 48 0 373 303 15 8 chr10 62920551 62920683 -77396082 - L1MC1 LINE L1 0 6333 6201 1393 199 25 39 chr10 62920683 62921044 -77395721 - MER93b LTR ERV1 -17 356 1 1192 176 8 65 chr10 62921065 62921327 -77395438 - AluJb SINE Alu -45 267 21 222 331 108 38 chr10 62921440 62921781 -77394984 - L2 LINE L2 -1863 1451 1087 598 115 0 0 chr10 62921957 62922044 -77394721 + AluSp/q SINE Alu 220 306 -7 3307 220 11 31 chr10 62922055 62922904 -77393861 + L1PA13 LINE L1 231 1062 -5725 1254 153 0 71 chr10 62924264 62924518 -77392247 - MER46A DNA MER2_type 0 236 1 318 182 15 0 chr10 62926105 62926171 -77390594 + L1ME2 LINE L1 6076 6142 -22 213 234 0 0 chr10 62926422 62926486 -77390279 + C-rich Low_complexity Low_complexity 1 64 0 419 221 21 43 chr10 62926617 62926757 -77390008 + LTR23 LTR ERV1 301 437 0 296 232 24 24 chr10 62926759 62926841 -77389924 - MIR SINE MIR -108 154 73 580 279 52 33 chr10 62927172 62927444 -77389321 + MER34 LTR ERV1 1 277 -265 248 243 122 28 chr10 62927529 62927636 -77389129 - LTR54B LTR ERV1 -208 290 174 383 215 74 107 chr10 62928112 62928261 -77388504 - L1MC4a LINE L1 -1751 6057 5914 183 372 80 29 chr10 62928328 62928465 -77388300 + MIR3 SINE MIR 35 178 -30 489 163 11 11 chr10 62928801 62928893 -77387872 - LTR56 LTR ERV1 -262 183 92 307 274 103 34 chr10 62928895 62929041 -77387724 - L1MC4a LINE L1 -944 5202 5047 284 329 27 10 chr10 62929043 62929341 -77387424 - L1MC4a LINE L1 -2092 4054 3752 1097 145 5 39 chr10 62929944 62930151 -77386614 - AluJb SINE Alu -3 309 110 816 334 45 16 chr10 62930368 62931033 -77385732 + ERVL LTR ERVL 1734 2467 -2829 1134 312 45 37 chr10 62931071 62931719 -77385046 + ERVL LTR ERVL 2549 3201 -2563 834 174 12 6 chr10 62931999 62932160 -77384605 + MER105 DNA DNA 1 162 -42 265 324 76 55 chr10 62932219 62932364 -77384401 - MER5B DNA MER1_type -30 148 1 332 349 32 5 chr10 62932776 62932965 -77383800 + L1M4 LINE L1 4975 5168 -978 1089 291 81 21 chr10 62933212 62933593 -77383172 + L2 LINE L2 2910 3313 0 284 310 82 13 chr10 62933869 62934027 -77382738 + L2 LINE L2 2602 2770 -544 1076 233 61 61 chr10 62934170 62934647 -77382118 - MER74B LTR ERVL -56 566 90 910 129 23 4 chr10 62934659 62934878 -77381887 + Tigger3(Golem) DNA MER2_type 18 324 -2705 1991 163 30 0 chr10 62934878 62935215 -77381550 + MER7A DNA MER2_type 1 345 -1 2621 95 8 16 chr10 62935943 62936321 -77380444 + THE1C LTR MaLR 1 375 0 678 244 28 60 chr10 62936507 62936724 -77380041 + MER63A DNA MER1_type 1 210 0 199 356 44 52 chr10 62937418 62937553 -77379212 - MIR SINE MIR -99 163 30 294 291 114 18 chr10 62937714 62937934 -77378831 - L1ME LINE L1 -323 5798 5558 1715 26 0 0 chr10 62937953 62938142 -77378623 - AluY SINE Alu -106 205 17 249 244 81 32 chr10 62939038 62939161 -77377604 - L1MC4a LINE L1 -1881 5927 5799 180 0 0 0 chr10 62939518 62939538 -77377227 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 312 301 98 7 chr10 62939638 62939781 -77376984 + MIR3 SINE MIR 44 199 -9 182 293 26 69 chr10 62941631 62941707 -77375058 + MIR3 SINE MIR 81 152 -56 353 261 39 56 chr10 62941707 62941887 -77374878 - MER5B DNA MER1_type -1 177 1 182 293 26 69 chr10 62941887 62941926 -77374839 + MIR3 SINE MIR 152 191 -17 514 278 57 21 chr10 62942580 62942774 -77373991 - L2 LINE L2 0 3313 3113 323 248 43 81 chr10 62944450 62944611 -77372154 + MIR SINE MIR 78 232 -30 201 301 164 0 chr10 62945754 62945827 -77370938 - L2 LINE L2 0 3272 3188 2150 131 3 0 chr10 62945860 62946166 -77370599 - AluSx SINE Alu -5 307 1 338 258 60 26 chr10 62947377 62947528 -77369237 + MLT1L LTR MaLR 460 615 0 181 333 0 0 chr10 62947580 62947634 -77369131 + L2 LINE L2 3246 3299 -14 279 0 0 0 chr10 62947851 62947882 -77368883 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1320 75 14 61 chr10 62947911 62948125 -77368640 - L1PA14 LINE L1 0 6161 5958 310 290 84 23 chr10 62948352 62948483 -77368282 + MER5A DNA MER1_type 2 140 -49 223 333 77 0 chr10 62948487 62948565 -77368200 + L2 LINE L2 3189 3272 0 795 285 48 9 chr10 62948724 62948952 -77367813 - MIR SINE MIR -17 245 9 392 298 53 0 chr10 62949061 62949175 -77367590 - MIR3 SINE MIR -7 201 82 228 341 110 11 chr10 62950810 62950901 -77365864 - L2 LINE L2 -5 3267 3168 217 300 111 22 chr10 62950891 62950981 -77365784 - L3 LINE CR1 -199 1378 1281 * 213 329 0 27 chr10 62951021 62951094 -77365671 - L3 LINE CR1 -426 1151 1081 617 286 158 57 chr10 62951836 62952331 -77364434 + LTR33 LTR ERVL 3 516 -7 221 56 0 28 chr10 62952439 62952475 -77364290 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 5542 30 0 0 chr10 62952475 62953148 -77363617 - L1PA3 LINE L1 -24 6131 5459 215 277 48 35 chr10 62953183 62953311 -77363454 - MER5B DNA MER1_type -8 170 48 329 183 12 24 chr10 62953327 62953409 -77363356 + L1MC5 LINE L1 7833 7913 -48 795 306 0 0 chr10 62953974 62954183 -77362582 + MIR SINE MIR 48 256 -6 232 251 74 79 chr10 62955622 62955837 -77360928 - L1MC4 LINE L1 -1 8041 7828 318 182 15 0 chr10 62955891 62955957 -77360808 - L1ME2 LINE L1 -22 6142 6076 289 237 86 71 chr10 62956959 62957157 -77359608 + L1ME3A LINE L1 5962 6162 -8 801 138 8 31 chr10 62957667 62957797 -77358968 + FLAM_C SINE Alu 1 127 -16 543 266 68 23 chr10 62957906 62958083 -77358682 - MIR SINE MIR 0 262 78 655 184 0 0 chr10 62958106 62958215 -77358550 + MER45A DNA AcHobo 58 166 -12 210 164 27 55 chr10 62958314 62958387 -77358378 + (CAAA)n Simple_repeat Simple_repeat 3 73 0 22 0 0 0 chr10 62959595 62959617 -77357148 + AT_rich Low_complexity Low_complexity 1 22 0 227 311 40 0 chr10 62959679 62959753 -77357012 - MIR SINE MIR -99 163 87 24 0 0 0 chr10 62960668 62960692 -77356073 + AT_rich Low_complexity Low_complexity 1 24 0 3109 167 14 14 chr10 62960814 62961408 -77355357 - L1PB4 LINE L1 -7 6149 5556 379 258 58 19 chr10 62961425 62961580 -77355185 + L1ME4a LINE L1 5651 5811 -310 397 278 9 17 chr10 62961608 62961723 -77355042 + MIR SINE MIR 16 129 -133 180 271 34 0 chr10 62961770 62961829 -77354936 + MIR SINE MIR 111 171 -91 400 242 83 33 chr10 62961998 62962118 -77354647 + MER119 DNA MER1_type 7 132 -451 436 217 104 0 chr10 62962126 62962241 -77354524 + MER119 DNA MER1_type 456 582 -1 254 220 98 45 chr10 62962253 62962385 -77354380 + L1ME4a LINE L1 5980 6118 -3 338 286 24 36 chr10 62962802 62962970 -77353795 - L2 LINE L2 -555 2759 2594 400 179 57 9 chr10 62963095 62963201 -77353564 - L1ME4a LINE L1 0 6121 6011 223 202 21 32 chr10 62963206 62963300 -77353465 + (TA)n Simple_repeat Simple_repeat 1 93 0 744 268 13 48 chr10 62963369 62963600 -77353165 - MIR SINE MIR -16 246 24 776 202 53 48 chr10 62963693 62963901 -77352864 + MER3 DNA MER1_type 1 209 0 324 317 172 13 chr10 62963929 62964156 -77352609 - HAL1 LINE L1 -81 2426 2164 443 266 129 49 chr10 62964169 62964455 -77352310 - MLT1K LTR MaLR -1 587 279 216 158 0 0 chr10 62964498 62964536 -77352229 + (CA)n Simple_repeat Simple_repeat 2 39 0 302 271 108 125 chr10 62964536 62964960 -77351805 - MLT1H LTR MaLR -38 511 95 245 327 52 47 chr10 62965035 62965246 -77351519 - MLT1K LTR MaLR -367 221 10 279 0 0 0 chr10 62966144 62966175 -77350590 + (CA)n Simple_repeat Simple_repeat 2 32 0 26 0 0 0 chr10 62966364 62966390 -77350375 + AT_rich Low_complexity Low_complexity 1 26 0 1994 132 21 15 chr10 62967961 62968294 -77348471 - MER44D DNA MER2_type -4 605 1 260 247 59 12 chr10 62968513 62968598 -77348167 - MER102a DNA MER1_type 0 330 242 316 248 107 27 chr10 62969341 62969490 -77347275 + L1MEc LINE L1 1307 1467 -4929 206 188 21 62 chr10 62969730 62969778 -77346987 - MER5A DNA MER1_type 0 189 144 591 284 72 0 chr10 62972007 62972201 -77344564 + L2 LINE L2 3106 3313 0 201 74 0 0 chr10 62972505 62972532 -77344233 + (ATGGTG)n Simple_repeat Simple_repeat 1 27 0 4210 197 109 118 chr10 62972532 62974290 -77342475 + MER52A LTR ERV1 15 1755 0 1291 174 0 0 chr10 62974484 62974674 -77342091 - AluJb SINE Alu -18 294 105 26 30 0 0 chr10 62974817 62974850 -77341915 + AT_rich Low_complexity Low_complexity 1 33 0 255 286 20 10 chr10 62975930 62976002 -77340763 + (TATG)n Simple_repeat Simple_repeat 2 77 -23 8550 106 19 6 chr10 62976002 62977282 -77339483 + HSMAR2 DNA Mariner 2 1298 -4 255 286 20 10 chr10 62977282 62977307 -77339458 + (TATG)n Simple_repeat Simple_repeat 77 100 0 25 0 0 0 chr10 62977343 62977368 -77339397 + AT_rich Low_complexity Low_complexity 1 25 0 803 290 40 0 chr10 62977385 62977609 -77339156 - MIR SINE MIR -26 236 4 378 231 169 19 chr10 62977617 62977777 -77338988 - L1ME4a LINE L1 -268 5853 5670 767 282 165 12 chr10 62977779 62978198 -77338567 - LTR16C LTR ERVL -8 483 1 21 57 0 0 chr10 62978417 62978452 -77338313 + AT_rich Low_complexity Low_complexity 1 35 0 2460 80 0 0 chr10 62978761 62979061 -77337704 + AluY SINE Alu 1 300 -11 22 80 0 0 chr10 62979239 62979289 -77337476 + AT_rich Low_complexity Low_complexity 1 50 0 1259 221 147 24 chr10 62979998 62980414 -77336351 + MLT1C LTR MaLR 1 467 0 818 271 53 16 chr10 62981138 62981385 -77335380 + MIR SINE MIR 7 262 0 825 266 48 63 chr10 62981418 62981895 -77334870 - MLT1L LTR MaLR 0 615 146 440 284 71 33 chr10 62982244 62982455 -77334310 + L2 LINE L2 2155 2373 -941 717 188 62 14 chr10 62982960 62983104 -77333661 + FAM SINE Alu 8 158 -27 186 71 0 0 chr10 62983104 62983132 -77333633 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 272 264 82 45 chr10 62984707 62984817 -77331948 - L2 LINE L2 -21 3251 3138 242 286 31 10 chr10 62984935 62985033 -77331732 + HAL1 LINE L1 1363 1462 -1045 1008 274 85 19 chr10 62985264 62985640 -77331125 - MLT1I LTR MaLR -8 401 1 2360 84 0 3 chr10 62986243 62986551 -77330214 - AluY SINE Alu -4 307 1 464 237 61 0 chr10 62987191 62987305 -77329460 + MER94 DNA DNA 4 124 -10 292 286 13 0 chr10 62987648 62987725 -77329040 - L2 LINE L2 -1 3271 3194 2156 130 3 3 chr10 62988898 62989205 -77327560 - AluSx SINE Alu -5 307 1 224 337 58 12 chr10 62989907 62989993 -77326772 + MIR SINE MIR 29 118 -144 252 299 126 55 chr10 62991078 62991205 -77325560 - L2 LINE L2 0 3272 3137 197 338 15 98 chr10 62991415 62991548 -77325217 - MIR SINE MIR -113 149 28 2597 95 19 6 chr10 62991986 62992345 -77324420 - THE1B LTR MaLR 0 364 1 290 279 78 8 chr10 62992486 62992615 -77324150 + L1MC4a LINE L1 2453 2590 -3556 413 266 96 103 chr10 62992714 62992930 -77323835 + L1MC4a LINE L1 2684 2900 -3246 2064 99 37 0 chr10 62992930 62993235 -77323530 + AluSg SINE Alu 1 315 0 413 266 96 103 chr10 62993235 62993475 -77323290 + L1MC4a LINE L1 2900 3138 -3008 356 300 50 48 chr10 62993478 62993698 -77323067 + L1MC4a LINE L1 4674 4892 -1254 2345 136 18 67 chr10 62993698 62994099 -77322666 + MSTA LTR MaLR 1 379 -49 2021 101 11 14 chr10 62994099 62994377 -77322388 - AluSx SINE Alu -35 277 1 2345 136 18 67 chr10 62994377 62994425 -77322340 + MSTA LTR MaLR 379 428 0 356 300 50 48 chr10 62994425 62994641 -77322124 + L1MC4a LINE L1 4892 5111 -1035 713 253 25 8 chr10 62994875 62995116 -77321649 + L1MD2 LINE L1 6113 6357 -2 689 283 100 47 chr10 62995111 62995668 -77321097 + L1MC4a LINE L1 5374 5962 -208 * 2133 118 0 22 chr10 62995857 62996171 -77320594 - AluSx SINE Alu -5 307 1 2941 256 78 47 chr10 62996548 62997897 -77318868 - L2 LINE L2 0 3313 1922 1286 179 69 29 chr10 62998076 62998322 -77318443 - AluJo SINE Alu -51 261 6 516 324 70 17 chr10 62998360 62998718 -77318047 + L1MC4 LINE L1 4288 4664 -1482 808 272 64 14 chr10 62998754 62999224 -77317541 + L1MC4 LINE L1 5174 5664 -813 222 37 0 0 chr10 62999237 62999264 -77317501 + (TA)n Simple_repeat Simple_repeat 2 28 0 200 57 0 29 chr10 62999281 62999316 -77317449 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 357 302 45 18 chr10 62999335 62999557 -77317208 + L1MC4 LINE L1 5701 5928 -1880 1259 202 73 0 chr10 63001597 63001710 -77315055 + AluJo SINE Alu 1 104 -208 219 69 0 0 chr10 63001710 63001739 -77315026 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1259 202 73 0 chr10 63001739 63001873 -77314892 + AluJo SINE Alu 104 266 -46 297 0 0 0 chr10 63001877 63001910 -77314855 + (TC)n Simple_repeat Simple_repeat 2 34 0 315 219 0 0 chr10 63001912 63001976 -77314789 + L1MC4 LINE L1 6640 6703 -1339 275 363 71 8 chr10 63002365 63002405 -77314360 - MIR SINE MIR -60 148 112 2194 64 3 0 chr10 63002405 63002687 -77314078 - L1PA8 LINE L1 -3 6169 5887 275 363 71 8 chr10 63002687 63002810 -77313955 - MIR SINE MIR -96 112 23 609 192 33 26 chr10 63003009 63003160 -77313605 - MER103 DNA DNA -11 155 4 259 149 27 95 chr10 63003425 63003499 -77313266 + MIR3 SINE MIR 112 180 -28 331 305 71 14 chr10 63003565 63003706 -77313059 - L1MC4 LINE L1 -1 8041 7893 785 206 28 9 chr10 63003737 63003951 -77312814 - L1MC4 LINE L1 -136 7906 7689 1963 93 0 4 chr10 63004017 63004276 -77312489 + AluSg SINE Alu 38 295 -15 303 271 159 47 chr10 63004809 63004916 -77311849 + MIR SINE MIR 5 123 -85 1902 161 92 67 chr10 63007308 63007799 -77308966 + MLT1D LTR MaLR 1 503 -2 218 307 117 38 chr10 63008583 63008847 -77307918 + L2 LINE L2 1901 2185 -1129 343 286 68 19 chr10 63008948 63009109 -77307656 + L2 LINE L2 2900 3068 -245 1998 188 37 22 chr10 63009665 63010002 -77306763 - L1MB8 LINE L1 -14 6164 5817 2294 114 0 3 chr10 63010002 63010308 -77306457 - AluSq SINE Alu -8 305 1 1998 188 37 22 chr10 63010308 63010433 -77306332 - L1MB8 LINE L1 -361 5817 5695 241 331 132 29 chr10 63010599 63010735 -77306030 + L2 LINE L2 3117 3266 -6 313 332 162 21 chr10 63010762 63011090 -77305675 + L2 LINE L2 2385 2758 -556 189 0 0 0 chr10 63011997 63012018 -77304747 + (T)n Simple_repeat Simple_repeat 1 21 0 413 313 28 28 chr10 63012510 63012654 -77304111 - MIR SINE MIR -109 153 10 308 95 0 48 chr10 63012665 63012728 -77304037 + (GA)n Simple_repeat Simple_repeat 1 60 0 244 208 67 7 chr10 63015856 63016005 -77300760 + (TA)n Simple_repeat Simple_repeat 2 159 0 206 336 107 0 chr10 63016015 63016137 -77300628 + MIR3 SINE MIR 64 198 -10 1386 164 29 16 chr10 63016451 63016763 -77300002 + MER33 DNA MER1_type 5 320 -4 292 355 30 9 chr10 63018423 63018529 -77298236 - MIR SINE MIR -65 143 43 258 32 0 0 chr10 63019099 63019130 -77297635 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 257 333 67 17 chr10 63020071 63020191 -77296574 + L3b LINE CR1 1390 1515 -68 604 278 6 6 chr10 63021602 63021764 -77295001 + MIR SINE MIR 9 170 -92 220 376 45 22 chr10 63022441 63022619 -77294146 + L2 LINE L2 2872 3053 -219 22 56 0 0 chr10 63022875 63022911 -77293854 + AT_rich Low_complexity Low_complexity 1 36 0 395 312 110 6 chr10 63023140 63023313 -77293452 - MIR SINE MIR -69 193 3 2840 19 0 0 chr10 63023535 63023846 -77292919 - AluYb8 SINE Alu -7 311 1 250 349 108 53 chr10 63024174 63024702 -77292063 + L2 LINE L2 2091 2647 -667 507 289 5 48 chr10 63024872 63025059 -77291706 - MER104 DNA MER2_type -1 179 1 439 278 99 99 chr10 63025068 63025420 -77291345 + L2 LINE L2 2918 3269 -3 226 315 0 0 chr10 63025633 63025687 -77291078 + L2 LINE L2 3250 3303 -10 2058 185 71 17 chr10 63026995 63027417 -77289348 - MLT1D LTR MaLR -60 445 1 374 294 118 7 chr10 63027417 63027570 -77289195 + MIR SINE MIR 77 246 -16 183 265 88 73 chr10 63027852 63027920 -77288845 - L3 LINE CR1 -113 1464 1396 2582 129 0 21 chr10 63027920 63028300 -77288465 + MSTC LTR MaLR 1 372 -56 191 114 29 0 chr10 63028300 63028335 -77288430 + T-rich Low_complexity Low_complexity 2 37 0 16628 152 51 18 chr10 63028347 63030103 -77286662 - L1PB1 LINE L1 -7 6860 5164 189 0 0 0 chr10 63030103 63030124 -77286641 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 16628 152 51 18 chr10 63030124 63031340 -77285425 - L1PB1 LINE L1 -1703 5164 3990 2108 131 3 16 chr10 63031340 63031654 -77285111 - AluSx SINE Alu -2 310 1 16628 152 51 18 chr10 63031654 63032472 -77284293 - L1PB1 LINE L1 -2877 3990 3201 1962 132 7 0 chr10 63032472 63032791 -77283974 - AluSx SINE Alu 0 321 1 16628 152 51 18 chr10 63032791 63033944 -77282821 - L1PB1 LINE L1 -3666 3201 2088 2772 100 14 6 chr10 63033944 63034305 -77282460 - THE1B LTR MaLR 0 364 1 16628 152 51 18 chr10 63034305 63035969 -77280796 - L1PB1 LINE L1 -4779 2088 1 559 93 0 0 chr10 63035977 63036052 -77280713 + MSTC LTR MaLR 354 428 0 378 292 58 62 chr10 63036052 63036278 -77280487 - L3 LINE CR1 -177 1400 1176 251 294 0 65 chr10 63036453 63036545 -77280220 + L2 LINE L2 2574 2659 -655 340 300 22 42 chr10 63036744 63036890 -77279875 + L1MDa LINE L1 1 589 -5941 2320 172 69 5 chr10 63036993 63037399 -77279366 + MSTB1 LTR MaLR 1 432 0 4339 224 80 71 chr10 63037986 63038991 -77277774 + L1MDa LINE L1 918 1912 -4628 2271 73 6 19 chr10 63038991 63039306 -77277459 + AluY SINE Alu 1 311 0 4339 224 80 71 chr10 63039306 63041479 -77275286 + L1MDa LINE L1 1912 4088 -2452 219 69 0 0 chr10 63041488 63041517 -77275248 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 213 119 0 0 chr10 63041612 63041654 -77275111 + (TA)n Simple_repeat Simple_repeat 2 43 0 1087 171 0 0 chr10 63041875 63042039 -77274726 - FRAM SINE Alu -13 163 1 208 237 34 0 chr10 63042864 63042923 -77273842 + CT-rich Low_complexity Low_complexity 2 62 0 507 200 124 0 chr10 63043070 63043133 -77273632 - MLT1A1 LTR MaLR -202 163 109 1597 172 47 24 chr10 63043133 63043429 -77273336 - AluJb SINE Alu -9 303 1 507 200 124 0 chr10 63043429 63043510 -77273255 - MLT1A1 LTR MaLR -256 109 1 304 234 135 27 chr10 63044309 63044420 -77272345 - L2 LINE L2 0 3313 3191 246 196 0 0 chr10 63044471 63044517 -77272248 - Charlie8 DNA MER1_type -2140 277 232 635 257 80 27 chr10 63044609 63044844 -77271921 - MIR SINE MIR -1 261 12 1025 104 0 0 chr10 63045018 63045153 -77271612 + AluSg/x SINE Alu 161 295 -15 259 219 0 16 chr10 63045413 63045477 -77271288 + MER103 DNA DNA 1 63 -103 287 310 18 31 chr10 63045533 63045665 -77271100 - MIR SINE MIR -16 192 62 283 340 9 9 chr10 63045699 63045805 -77270960 - MIR3 SINE MIR -21 187 82 469 213 29 103 chr10 63046019 63046193 -77270572 - MER5B DNA MER1_type -16 162 2 315 0 0 0 chr10 63046320 63046355 -77270410 + (CA)n Simple_repeat Simple_repeat 1 35 0 521 42 14 0 chr10 63047390 63047462 -77269303 + (TC)n Simple_repeat Simple_repeat 1 73 0 23 0 0 0 chr10 63047893 63047916 -77268849 + AT_rich Low_complexity Low_complexity 1 23 0 616 207 104 0 chr10 63048106 63048241 -77268524 + MER69 DNA AcHobo 1 149 -2377 333 229 0 0 chr10 63048236 63048306 -77268459 + MER69 DNA AcHobo 2450 2519 -7 * 204 373 32 22 chr10 63049421 63049606 -77267159 + L3 LINE CR1 1374 1560 -17 423 252 189 0 chr10 63049947 63050074 -77266691 + MIR3 SINE MIR 13 163 -45 * 718 273 11 62 chr10 63050069 63050344 -77266421 - MIR SINE MIR -1 261 1 275 400 0 0 chr10 63051328 63051413 -77265352 + L2 LINE L2 3212 3296 -17 1418 157 45 15 chr10 63051622 63051890 -77264875 + AluJb SINE Alu 36 311 -1 2975 210 82 51 chr10 63051891 63052646 -77264119 + L1ME1 LINE L1 4165 4895 -1271 5676 135 43 2 chr10 63052646 63053261 -77263504 + L1PA15 LINE L1 4271 4859 -1306 1600 186 0 43 chr10 63053261 63053601 -77263164 + AluJb SINE Alu 1 327 0 5676 135 43 2 chr10 63053601 63054861 -77261904 + L1PA15 LINE L1 4859 6165 0 2975 210 82 51 chr10 63054861 63054947 -77261818 + L1ME1 LINE L1 4895 4977 -1189 207 0 0 0 chr10 63054947 63054970 -77261795 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2975 210 82 51 chr10 63054970 63055794 -77260971 + L1ME1 LINE L1 4977 5886 -280 5352 134 28 30 chr10 63055798 63056732 -77260033 + L1MA7 LINE L1 5360 6291 0 2112 116 0 0 chr10 63056739 63057075 -77259690 + AluSx SINE Alu 1 336 0 873 217 86 23 chr10 63057091 63057312 -77259453 + L1MD2 LINE L1 5879 6113 -246 247 178 0 0 chr10 63057312 63057357 -77259408 + LTR66 LTR ERVL 394 438 -172 232 245 0 53 chr10 63057395 63057489 -77259276 + L1MC4 LINE L1 6615 6703 -1339 234 304 13 25 chr10 63057723 63057802 -77258963 - MIR SINE MIR -148 114 37 326 283 258 10 chr10 63057852 63058050 -77258715 + MIR SINE MIR 13 259 -3 333 0 0 0 chr10 63058389 63058426 -77258339 + (TG)n Simple_repeat Simple_repeat 2 38 0 3005 114 2 49 chr10 63058471 63058919 -77257846 + MSTA LTR MaLR 2 428 0 4167 184 29 11 chr10 63059946 63060766 -77255999 + L1MA9 LINE L1 5440 6274 -38 297 280 195 8 chr10 63061616 63061734 -77255031 + MIR SINE MIR 15 154 -108 475 284 59 72 chr10 63063163 63063399 -77253366 - L3 LINE CR1 -77 1500 1268 263 269 194 11 chr10 63064523 63064616 -77252149 - L2 LINE L2 -31 3241 3132 1601 243 133 8 chr10 63064616 63065098 -77251667 - MLT1F LTR MaLR 0 542 1 414 293 75 101 chr10 63065457 63065881 -77250884 + L2 LINE L2 2810 3222 -50 263 161 0 16 chr10 63065905 63065967 -77250798 + GA-rich Low_complexity Low_complexity 4 64 0 1963 181 13 43 chr10 63066066 63066442 -77250323 - MLT1A1 LTR MaLR 0 365 1 1876 118 0 72 chr10 63066949 63067295 -77249470 + AluSx SINE Alu 1 324 0 823 296 117 42 chr10 63067444 63067950 -77248815 + MLT1K LTR MaLR 10 553 -35 201 94 0 0 chr10 63068457 63068489 -77248276 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2271 97 3 0 chr10 63068656 63068946 -77247819 - AluSp SINE Alu -21 292 2 324 162 73 0 chr10 63072669 63072737 -77244028 - MLT1K LTR MaLR 0 588 516 921 295 148 20 chr10 63072981 63073536 -77243229 - L2 LINE L2 0 3313 2698 412 242 11 21 chr10 63073533 63073628 -77243137 - MIR SINE MIR -157 105 12 * 1023 254 62 7 chr10 63074514 63074802 -77241963 - L2 LINE L2 0 3313 3010 209 83 28 0 chr10 63075007 63075043 -77241722 + (TA)n Simple_repeat Simple_repeat 1 37 0 300 320 166 6 chr10 63075143 63075324 -77241441 + MIR SINE MIR 53 262 0 496 288 65 27 chr10 63076563 63076747 -77240018 - MIR SINE MIR -51 211 21 225 222 127 16 chr10 63077369 63077432 -77239333 + MLT1L LTR MaLR 35 104 -511 414 283 108 60 chr10 63077434 63077766 -77238999 + MLT1L LTR MaLR 222 569 -46 558 251 71 16 chr10 63079535 63079718 -77237047 - MER117 DNA MER1_type 0 197 5 211 218 36 127 chr10 63080664 63080774 -77235991 + MIR SINE MIR 49 148 -114 398 263 69 55 chr10 63080933 63081150 -77235615 - MIR SINE MIR -3 259 40 280 103 132 118 chr10 63082001 63082069 -77234696 - MIR SINE MIR -57 151 83 287 354 54 25 chr10 63082078 63082318 -77234447 + L2 LINE L2 2808 3054 -218 452 317 70 70 chr10 63082446 63082928 -77233837 - MLT1J LTR MaLR -5 506 25 328 266 62 0 chr10 63082930 63083043 -77233722 + L2 LINE L2 3193 3312 -1 435 221 12 98 chr10 63083472 63083635 -77233130 - L1ME LINE L1 -382 5739 5591 2466 86 0 0 chr10 63084140 63084444 -77232321 - AluSc SINE Alu -5 304 1 363 343 52 80 chr10 63084748 63085075 -77231690 + L2 LINE L2 2955 3272 0 437 323 43 0 chr10 63085403 63085567 -77231198 - MIR SINE MIR -6 256 86 206 313 111 10 chr10 63086952 63087051 -77229714 + MIR3 SINE MIR 78 186 -22 361 269 65 0 chr10 63087235 63087328 -77229437 - L2 LINE L2 0 3313 3215 400 226 102 81 chr10 63087809 63087995 -77228770 - MIR SINE MIR 0 262 73 43189 33 26 3 chr10 63088008 63094017 -77222748 + L1PA2 LINE L1 2 6155 0 2010 220 139 11 chr10 63094723 63095283 -77221482 + L1M4 LINE L1 4664 5295 -851 1119 160 57 72 chr10 63095283 63095698 -77221067 + MLT1A1 LTR MaLR 1 365 0 1826 178 20 3 chr10 63095698 63096041 -77220724 + L1M4 LINE L1 5291 5639 -545 485 212 10 10 chr10 63096041 63096140 -77220625 + MLT1J2 LTR MaLR 352 450 0 3326 225 49 11 chr10 63096696 63098057 -77218708 - L1MB7 LINE L1 0 6184 4775 753 73 0 0 chr10 63098126 63098222 -77218543 - L1PA8 LINE L1 -3 6169 6074 40 94 0 0 chr10 63098459 63098576 -77218189 + AT_rich Low_complexity Low_complexity 1 117 0 677 192 17 34 chr10 63098686 63098863 -77217902 - MER104 DNA MER2_type -3 177 4 208 259 93 0 chr10 63101037 63101091 -77215674 + MER91C DNA MER1_type 31 89 -51 628 239 201 0 chr10 63101878 63102062 -77214703 + MER58A DNA MER1_type 4 224 0 292 300 0 58 chr10 63102417 63102537 -77214228 + CT-rich Low_complexity Low_complexity 2 114 0 2022 153 0 10 chr10 63102840 63103154 -77213611 + AluJb SINE Alu 1 311 -1 532 133 0 0 chr10 63103192 63103275 -77213490 + L1MB1 LINE L1 6086 6168 0 2913 85 3 34 chr10 63104112 63104499 -77212266 - THE1C LTR MaLR 0 375 1 216 208 0 19 chr10 63105149 63105202 -77211563 + GA-rich Low_complexity Low_complexity 4 55 0 205 269 45 30 chr10 63105661 63105728 -77211037 + L2 LINE L2 3245 3312 -1 333 182 52 13 chr10 63106161 63106238 -77210527 + MER116 DNA Mariner 1 80 0 3171 199 30 81 chr10 63107713 63107985 -77208780 + L1ME1 LINE L1 5057 5341 -825 2581 14 0 0 chr10 63107985 63108263 -77208502 + AluYa5 SINE Alu 18 295 -16 3171 199 30 81 chr10 63108263 63109130 -77207635 + L1ME1 LINE L1 5341 6155 -11 646 293 39 61 chr10 63109318 63109776 -77206989 - L1MB7 LINE L1 -1815 4331 3884 183 254 191 0 chr10 63109856 63109919 -77206846 + L2 LINE L2 3155 3229 -43 570 309 7 7 chr10 63110460 63110612 -77206153 + MIR SINE MIR 4 155 -107 184 275 0 0 chr10 63110621 63110661 -77206104 + L2 LINE L2 3263 3302 -11 263 218 333 0 chr10 63113165 63113252 -77203513 - MER91C DNA MER1_type 0 140 25 702 239 154 57 chr10 63114702 63115162 -77201603 - LTR33A LTR ERVL -17 506 2 443 291 97 23 chr10 63115708 63115883 -77200882 + MIR SINE MIR 63 250 -12 853 259 177 5 chr10 63115898 63116265 -77200500 - MLT1K LTR MaLR -2 586 157 870 166 51 98 chr10 63116499 63116734 -77200031 + AluJo SINE Alu 70 293 -19 455 243 39 10 chr10 63117223 63117326 -77199439 - MER5A DNA MER1_type -77 112 7 479 194 32 32 chr10 63117536 63117660 -77199105 - MER103 DNA DNA 0 166 43 226 258 15 30 chr10 63117745 63117811 -77198954 - MER5B DNA MER1_type 0 178 114 6034 132 20 0 chr10 63118050 63118983 -77197782 - L1P LINE L1 -1534 4612 3661 1029 186 0 0 chr10 63118959 63119158 -77197607 - L1P LINE L1 -3019 3127 2929 * 4640 128 2 4 chr10 63119152 63120135 -77196630 + L1PA10 LINE L1 4641 5622 -546 2972 77 48 0 chr10 63120140 63120555 -77196210 + L1PA10 LINE L1 5718 6152 -16 238 239 94 36 chr10 63120761 63120899 -77195866 - L2 LINE L2 -70 3243 3098 831 270 153 63 chr10 63121473 63121981 -77194784 - LTR67 LTR ERVL -2 555 2 447 286 173 0 chr10 63122333 63122501 -77194264 - MIR SINE MIR -3 259 63 183 196 39 20 chr10 63122766 63122817 -77193948 - MIR SINE MIR -98 164 113 419 213 9 28 chr10 63122925 63123033 -77193732 - MLT1E2 LTR MaLR 0 626 521 347 269 0 21 chr10 63123063 63123156 -77193609 + MER117 DNA MER1_type 67 157 -40 2770 176 75 0 chr10 63123234 63123338 -77193427 - LTR26 LTR ERV1 -5 598 503 288 0 0 0 chr10 63123338 63123370 -77193395 + (GGAGA)n Simple_repeat Simple_repeat 4 35 0 2770 176 75 0 chr10 63123370 63123821 -77192944 - LTR26 LTR ERV1 -100 503 1 558 300 80 73 chr10 63124391 63124844 -77191921 - L2 LINE L2 -8 3264 2809 392 224 13 0 chr10 63126244 63126320 -77190445 + Tigger2 DNA MER2_type 2641 2717 -1 558 299 112 0 chr10 63126474 63126671 -77190094 - L3 LINE CR1 -129 1448 1230 2182 148 46 44 chr10 63127207 63127254 -77189511 + Tigger2a DNA MER2_type 1 46 -2662 2601 45 0 13 chr10 63127254 63127568 -77189197 - AluY SINE Alu 0 311 2 2182 148 46 44 chr10 63127568 63127953 -77188812 + Tigger2a DNA MER2_type 46 434 0 28 48 0 0 chr10 63129746 63129788 -77186977 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr10 63129796 63129821 -77186944 + (TA)n Simple_repeat Simple_repeat 1 25 0 312 263 29 46 chr10 63131751 63131870 -77184895 - MIR SINE MIR -68 140 38 2676 78 0 3 chr10 63132650 63133022 -77183743 - L1PB2 LINE L1 -193 5958 5588 1011 95 7 0 chr10 63133022 63133166 -77183599 + L1PB2 LINE L1 6001 6148 -3 465 291 50 33 chr10 63134614 63134796 -77181969 - MIR SINE MIR -75 187 3 1067 156 41 70 chr10 63135201 63135407 -77181358 - MER46A DNA MER2_type -2495 236 37 2002 87 26 62 chr10 63135407 63135716 -77181049 + AluSq SINE Alu 1 298 -15 1067 156 41 70 chr10 63135716 63135752 -77181013 - MER46A DNA MER2_type -2694 37 1 1330 161 8 8 chr10 63136760 63136996 -77179769 + MER46A DNA MER2_type 1 236 0 230 222 0 25 chr10 63137396 63137477 -77179288 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 2955 146 78 20 chr10 63137501 63138104 -77178661 + Tigger3b DNA MER2_type 1 638 -593 5930 119 16 26 chr10 63138108 63138131 -77178634 + L1PB1 LINE L1 4776 4798 -1353 2284 70 3 3 chr10 63138131 63138459 -77178306 + AluSx SINE Alu 1 328 0 5930 119 16 26 chr10 63138459 63139828 -77176937 + L1PB1 LINE L1 4798 6150 -1 3493 117 40 13 chr10 63139847 63140446 -77176319 + Tigger3b DNA MER2_type 617 1231 0 250 301 103 0 chr10 63140809 63140945 -77175820 - MIR3 SINE MIR -11 197 48 230 198 0 74 chr10 63141353 63141434 -77175331 + CT-rich Low_complexity Low_complexity 2 76 0 185 238 48 32 chr10 63142006 63142069 -77174696 + L3b LINE CR1 1257 1320 -263 22 35 0 0 chr10 63142206 63142235 -77174530 + AT_rich Low_complexity Low_complexity 1 29 0 785 288 92 52 chr10 63142715 63143289 -77173476 - L2 LINE L2 0 3313 2627 324 296 64 24 chr10 63143607 63143732 -77173033 - HAL1b LINE L1 -10 1338 1209 310 248 40 50 chr10 63145268 63145369 -77171396 + L2 LINE L2 3211 3310 -3 356 226 10 29 chr10 63145371 63145473 -77171292 - L1ME4a LINE L1 -62 6059 5960 31 58 0 0 chr10 63145658 63145710 -77171055 + AT_rich Low_complexity Low_complexity 1 52 0 1960 162 61 5 chr10 63146219 63146627 -77170138 + Charlie1 DNA MER1_type 2160 2590 -171 22 0 0 0 chr10 63146932 63146954 -77169811 + AT_rich Low_complexity Low_complexity 1 22 0 384 346 35 58 chr10 63147566 63147913 -77168852 + L2 LINE L2 2933 3271 -1 184 284 0 99 chr10 63148029 63148110 -77168655 + L2 LINE L2 2 74 -3240 354 412 71 12 chr10 63148893 63149148 -77167617 + L2 LINE L2 2990 3259 -13 493 322 27 7 chr10 63149596 63149742 -77167023 + MIR3 SINE MIR 3 151 -57 1793 164 126 15 chr10 63150477 63150867 -77165898 - Tigger2a DNA MER2_type -1 433 1 2157 130 0 3 chr10 63151738 63152037 -77164728 + AluSx SINE Alu 1 298 -14 437 274 37 19 chr10 63152046 63152245 -77164520 + L1P2 LINE L1 5640 5841 -313 471 253 165 0 chr10 63155017 63155199 -77161566 + MER58A DNA MER1_type 12 223 -1 288 294 111 0 chr10 63155213 63155325 -77161440 - MIR SINE MIR -58 150 42 369 299 95 102 chr10 63156378 63156937 -77159828 + L1M2 LINE L1 505 1059 -5790 234 0 0 0 chr10 63157467 63157493 -77159272 + (T)n Simple_repeat Simple_repeat 1 26 0 416 286 154 6 chr10 63157798 63157980 -77158785 + MIR SINE MIR 20 228 -34 2263 84 23 0 chr10 63158382 63158681 -77158084 - AluSx SINE Alu -6 306 1 23 33 0 0 chr10 63158782 63158812 -77157953 + AT_rich Low_complexity Low_complexity 1 30 0 189 135 81 0 chr10 63158925 63158962 -77157803 - MIR SINE MIR -65 197 158 692 294 169 69 chr10 63158967 63159345 -77157420 + L2 LINE L2 2857 3272 0 377 246 31 11 chr10 63159357 63159477 -77157288 - MIR SINE MIR -57 151 24 301 361 98 8 chr10 63159495 63159617 -77157148 - MIR SINE MIR -74 134 1 706 43 0 97 chr10 63159680 63159990 -77156775 + (TA)n Simple_repeat Simple_repeat 1 280 0 511 70 2 104 chr10 63160019 63160566 -77156199 + (TA)n Simple_repeat Simple_repeat 1 491 0 577 46 0 103 chr10 63160606 63160800 -77155965 + (TA)n Simple_repeat Simple_repeat 2 175 0 463 68 0 135 chr10 63160847 63161054 -77155711 + (TA)n Simple_repeat Simple_repeat 2 180 0 482 65 0 135 chr10 63161071 63161271 -77155494 + (TA)n Simple_repeat Simple_repeat 1 173 0 339 254 0 0 chr10 63161309 63161372 -77155393 + L2 LINE L2 3202 3264 -8 348 261 146 18 chr10 63161446 63161611 -77155154 + MER5A DNA MER1_type 1 186 -3 180 290 86 54 chr10 63161696 63161789 -77154976 - MIR SINE MIR -166 96 1 308 327 0 9 chr10 63161789 63161896 -77154869 + GA-rich Low_complexity Low_complexity 1 106 0 186 143 20 82 chr10 63162531 63162580 -77154185 - L2 LINE L2 0 3313 3268 320 315 126 14 chr10 63162921 63163064 -77153701 + MIR3 SINE MIR 23 181 -27 2083 121 7 3 chr10 63163110 63163400 -77153365 + AluSx SINE Alu 1 291 -21 1853 135 156 13 chr10 63163519 63163897 -77152868 - MSTB1 LTR MaLR 0 432 1 652 377 0 0 chr10 63163915 63164172 -77152593 - MIR SINE MIR 0 262 6 274 253 0 38 chr10 63164168 63164247 -77152518 + L2 LINE L2 3238 3313 0 * 1633 212 45 25 chr10 63164815 63165264 -77151501 - L1ME3A LINE L1 0 6170 5713 301 175 0 0 chr10 63165293 63165350 -77151415 + MER89 LTR ERV1 9 65 -494 1962 185 11 3 chr10 63165361 63165740 -77151025 + MER89 LTR ERV1 178 559 0 1131 258 46 6 chr10 63165744 63166180 -77150585 - L1ME3A LINE L1 -481 5689 5236 1830 262 79 25 chr10 63166232 63167168 -77149597 - L1ME3A LINE L1 -1050 5096 4110 2537 71 0 0 chr10 63167171 63167482 -77149283 + AluY SINE Alu 1 311 0 1264 157 127 57 chr10 63167659 63167687 -77149078 - MLT1A1 LTR MaLR -11 354 329 2147 128 0 0 chr10 63167687 63167984 -77148781 + AluSx SINE Alu 1 297 -15 1264 157 127 57 chr10 63167984 63168286 -77148479 - MLT1A1 LTR MaLR -36 329 1 325 242 65 75 chr10 63168288 63168474 -77148291 + L1M4 LINE L1 5047 5230 -916 327 298 16 0 chr10 63168497 63168618 -77148147 + L1P LINE L1 5305 5427 -729 577 57 0 100 chr10 63169144 63169453 -77147312 + (TA)n Simple_repeat Simple_repeat 1 278 0 463 68 0 135 chr10 63169501 63169708 -77147057 + (TA)n Simple_repeat Simple_repeat 2 180 0 482 65 0 135 chr10 63169724 63169924 -77146841 + (TA)n Simple_repeat Simple_repeat 1 173 0 339 254 0 0 chr10 63169962 63170025 -77146740 + L2 LINE L2 3202 3264 -8 348 261 146 18 chr10 63170099 63170264 -77146501 + MER5A DNA MER1_type 1 186 -3 180 290 86 54 chr10 63170349 63170442 -77146323 - MIR SINE MIR -166 96 1 308 327 0 9 chr10 63170442 63170549 -77146216 + GA-rich Low_complexity Low_complexity 1 106 0 186 143 20 82 chr10 63171184 63171233 -77145532 - L2 LINE L2 0 3313 3268 315 315 126 14 chr10 63171574 63171717 -77145048 + MIR3 SINE MIR 23 181 -27 2069 121 7 3 chr10 63171763 63172053 -77144712 + AluSx SINE Alu 1 291 -21 1843 135 156 13 chr10 63172172 63172550 -77144215 - MSTB1 LTR MaLR 0 432 1 660 377 0 0 chr10 63172568 63172825 -77143940 - MIR SINE MIR 0 262 6 272 253 0 38 chr10 63172821 63172900 -77143865 + L2 LINE L2 3238 3313 0 * 1772 212 45 25 chr10 63173468 63173917 -77142848 - L1ME3A LINE L1 0 6668 6211 319 175 0 0 chr10 63173946 63174003 -77142762 + MER89 LTR ERV1 9 65 -494 2084 185 11 3 chr10 63174014 63174393 -77142372 + MER89 LTR ERV1 178 559 0 1239 258 46 6 chr10 63174397 63174833 -77141932 - L1ME3A LINE L1 -481 6187 5734 4918 265 72 30 chr10 63174844 63175824 -77140941 - L1ME3A LINE L1 -1019 5625 4687 2324 75 0 0 chr10 63175824 63176117 -77140648 + AluY SINE Alu 1 293 -18 4918 265 72 30 chr10 63176117 63176383 -77140382 - L1ME3A LINE L1 -1957 4687 4434 2324 85 0 0 chr10 63176383 63176689 -77140076 - AluY SINE Alu -5 306 1 4918 265 72 30 chr10 63176689 63176759 -77140006 - L1ME3A LINE L1 -2210 4434 4368 225 0 0 0 chr10 63176759 63176784 -77139981 + (CA)n Simple_repeat Simple_repeat 2 26 0 4918 265 72 30 chr10 63176784 63177846 -77138919 - L1ME3A LINE L1 -2276 4368 3146 418 242 46 41 chr10 63177907 63177942 -77138823 - L1ME3A LINE L1 -3634 3010 2977 1893 179 40 3 chr10 63177942 63178294 -77138471 - MLT1A1 LTR MaLR 0 365 1 418 242 46 41 chr10 63178294 63178430 -77138335 - L1ME3A LINE L1 -3667 2977 2835 2163 170 26 34 chr10 63178430 63178848 -77137917 - MER47B DNA MER2_type -2 416 2 418 242 46 41 chr10 63178848 63178894 -77137871 - L1ME3A LINE L1 -3809 2835 2791 1326 186 0 0 chr10 63178904 63179124 -77137641 - ERVL LTR ERVL -1111 4653 4434 3000 171 8 19 chr10 63179149 63179663 -77137102 - MLT2B3 LTR ERVL -46 508 1 20552 146 26 11 chr10 63179663 63181196 -77135569 - ERVL-B3 LTR ERVL -7 5757 4248 2565 98 16 22 chr10 63181196 63181562 -77135203 + THE1B LTR MaLR 1 364 0 20552 146 26 11 chr10 63181562 63183380 -77133385 - ERVL-B3 LTR ERVL -1516 4248 2356 1997 140 12 39 chr10 63183370 63183706 -77133059 + ERVL LTR ERVL 4858 5184 -580 * 449 267 41 37 chr10 63183712 63184103 -77132662 - L1MDa LINE L1 -3890 2754 2409 366 317 13 13 chr10 63184207 63184431 -77132334 - L1MDa LINE L1 -4574 2251 2028 1641 245 71 42 chr10 63184893 63185412 -77131353 + MLT1F LTR MaLR 9 542 0 449 319 40 36 chr10 63185583 63185859 -77130906 + MLT1F-int LTR MaLR 300 576 -795 517 269 29 116 chr10 63186562 63186908 -77129857 + MLT1F-int LTR MaLR 1056 1371 0 879 289 62 4 chr10 63186926 63187182 -77129583 + MLT1F LTR MaLR 38 308 -234 683 70 147 32 chr10 63187182 63187305 -77129460 + THE1B LTR MaLR 1 132 -243 9621 93 16 7 chr10 63187305 63188603 -77128162 + THE1B-int LTR MaLR 271 1580 0 2218 116 53 28 chr10 63188603 63188958 -77127807 + THE1B LTR MaLR 1 364 0 750 263 20 61 chr10 63188960 63189207 -77127558 + MLT1F LTR MaLR 331 567 0 1765 158 7 0 chr10 63189392 63189665 -77127100 - 7SLRNA srpRNA srpRNA 0 320 46 1300 290 69 26 chr10 63189669 63190414 -77126351 + L1MEc LINE L1 522 1305 -5091 2364 94 0 3 chr10 63190414 63190722 -77126043 + AluSq SINE Alu 1 307 -6 1300 290 69 26 chr10 63190722 63190777 -77125988 + L1MEc LINE L1 1305 1356 -5040 640 246 43 16 chr10 63190870 63191057 -77125708 + LTR41 LTR ERVL 1 192 -581 310 238 16 0 chr10 63191518 63191581 -77125184 - L1MDa LINE L1 -4875 1771 1708 5585 238 67 26 chr10 63191586 63193207 -77123558 - L1MDa LINE L1 -4840 1702 15 405 241 85 25 chr10 63193237 63193648 -77123117 + L1M4 LINE L1 4382 4767 -1379 2147 133 0 0 chr10 63193648 63193956 -77122809 - AluSx SINE Alu -4 308 1 1355 195 79 79 chr10 63193956 63194387 -77122378 + MSTB1 LTR MaLR 1 431 -1 405 241 85 25 chr10 63194387 63194447 -77122318 + L1M4 LINE L1 4766 4917 -1229 1848 120 30 0 chr10 63194504 63194770 -77121995 - AluSx SINE Alu -38 274 1 860 71 0 0 chr10 63194809 63194922 -77121843 + MER41B LTR ERV1 515 627 -8 4561 144 13 0 chr10 63194927 63195608 -77121157 + MER41B-int LTR ERV1 1 690 -5256 2224 122 69 8 chr10 63195609 63195971 -77120794 + MER41B-int LTR ERV1 1392 1775 -4171 824 157 50 0 chr10 63195958 63196098 -77120667 + MER41B-int LTR ERV1 2476 2622 -4915 * 2905 123 76 23 chr10 63196114 63196689 -77120076 + MER41B-int LTR ERV1 2212 3011 -3252 2136 122 3 0 chr10 63196689 63196983 -77119782 + AluSx SINE Alu 1 295 -17 2905 123 76 23 chr10 63196983 63197107 -77119658 + MER41B-int LTR ERV1 3011 3127 -3136 * 12898 95 22 5 chr10 63197085 63199308 -77117457 + MER41B-int LTR ERV1 2879 5943 -3 3244 125 83 0 chr10 63199309 63199814 -77116951 + MER41B LTR ERV1 1 547 -88 262 155 52 0 chr10 63199814 63199872 -77116893 + L1M4 LINE L1 4942 5002 -1144 785 273 36 21 chr10 63199893 63200117 -77116648 + MLT2B1 LTR ERVL 257 486 -34 446 0 19 0 chr10 63200117 63200171 -77116594 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 785 273 36 21 chr10 63200171 63200207 -77116558 + MLT2B1 LTR ERVL 486 520 0 814 247 60 78 chr10 63200214 63200571 -77116194 + L1ME LINE L1 4765 5127 -1019 520 94 0 0 chr10 63200571 63200656 -77116109 + L1PA16 LINE L1 6077 6161 -5 814 247 60 78 chr10 63200656 63200777 -77115988 + L1ME LINE L1 5127 5236 -910 3382 186 100 12 chr10 63200777 63201536 -77115229 - LTR1B LTR ERV1 0 826 1 814 247 60 78 chr10 63201536 63201570 -77115195 + L1ME LINE L1 5236 5269 -877 296 271 28 9 chr10 63201571 63201678 -77115087 + (TA)n Simple_repeat Simple_repeat 1 109 0 60 83 0 0 chr10 63201738 63201882 -77114883 + AT_rich Low_complexity Low_complexity 1 144 0 742 222 77 0 chr10 63201899 63202093 -77114672 + L1ME LINE L1 5318 5526 -636 1326 201 17 78 chr10 63202096 63202454 -77114311 + MLT1A2 LTR MaLR 39 374 0 642 273 58 0 chr10 63202640 63202812 -77113953 + MLT1J LTR MaLR 18 199 -312 1692 164 39 3 chr10 63202815 63203101 -77113664 - MER61D LTR ERV1 0 501 206 637 348 60 61 chr10 63203106 63203846 -77112919 - L2 LINE L2 -305 2967 2236 4728 230 67 59 chr10 63205347 63209074 -77107691 + L1MB4 LINE L1 4 3796 -2848 1680 194 11 53 chr10 63209086 63209463 -77107302 - MLT1B LTR MaLR 0 390 30 1019 238 24 66 chr10 63209468 63209847 -77106918 + L1MB4 LINE L1 3792 4154 -2490 * 3701 182 50 36 chr10 63209845 63210460 -77106305 + L1MB4 LINE L1 4883 5488 -1184 1731 189 56 54 chr10 63210460 63210926 -77105839 + MLT1C LTR MaLR 1 467 0 3701 182 50 36 chr10 63210926 63211715 -77105050 + L1MB4 LINE L1 5488 6330 -342 516 167 0 0 chr10 63211715 63211822 -77104943 + L1MB4 LINE L1 6571 6678 0 521 272 12 12 chr10 63211990 63212159 -77104606 - L1M4 LINE L1 -3235 2911 2743 31 26 0 0 chr10 63212714 63212752 -77104013 + AT_rich Low_complexity Low_complexity 1 38 0 234 226 32 16 chr10 63213111 63213173 -77103592 - MIR SINE MIR -129 133 71 408 345 68 30 chr10 63213181 63213416 -77103349 - MIR SINE MIR -4 258 15 281 250 62 18 chr10 63213747 63213859 -77102906 - L1MC4a LINE L1 -1897 5911 5795 15440 177 16 4 chr10 63213997 63217770 -77098995 - L1PA13 LINE L1 -5 6158 2346 204 216 0 0 chr10 63218590 63218627 -77098138 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 242 15 0 chr10 63218867 63218933 -77097832 + MER103 DNA DNA 57 123 -43 471 248 140 62 chr10 63219254 63219688 -77097077 + MLT1H1 LTR MaLR 14 489 -66 728 159 0 43 chr10 63219938 63220076 -77096689 + MER3 DNA MER1_type 78 209 0 22 35 0 0 chr10 63220440 63220469 -77096296 + AT_rich Low_complexity Low_complexity 1 29 0 312 198 75 75 chr10 63221297 63221403 -77095362 + MER5B DNA MER1_type 5 110 -68 24 32 0 0 chr10 63222043 63222074 -77094691 + AT_rich Low_complexity Low_complexity 1 31 0 631 198 6 64 chr10 63223023 63223062 -77093703 - MER45A DNA AcHobo -1433 148 108 414 107 12 83 chr10 63223062 63223146 -77093619 + MADE1 DNA Mariner 1 78 -2 631 198 6 64 chr10 63223146 63223263 -77093502 - MER45A DNA AcHobo -1473 108 1 1169 124 10 40 chr10 63223319 63223520 -77093245 + MER2 DNA MER2_type 3 197 -148 25 90 0 0 chr10 63223524 63223591 -77093174 + AT_rich Low_complexity Low_complexity 1 67 0 1751 156 0 41 chr10 63224700 63224995 -77091770 + AluJb SINE Alu 1 283 -29 388 246 87 64 chr10 63225040 63225398 -77091367 + L1MC4a LINE L1 5649 6014 -1794 2118 105 7 14 chr10 63225528 63225824 -77090941 + AluSg SINE Alu 1 294 -16 1429 200 96 0 chr10 63226101 63226381 -77090384 - AluJo SINE Alu -5 307 1 24 0 0 0 chr10 63226888 63226912 -77089853 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr10 63226994 63227028 -77089737 + AT_rich Low_complexity Low_complexity 1 34 0 406 320 52 18 chr10 63227445 63227635 -77089130 + MLT1J LTR MaLR 54 290 -221 4175 90 40 2 chr10 63227635 63228213 -77088552 + MER4A LTR ERV1 1 600 0 406 320 52 18 chr10 63228213 63228236 -77088529 + MLT1J LTR MaLR 290 311 -200 1162 174 61 9 chr10 63228375 63228650 -77088115 - AluJb SINE Alu 0 370 85 2683 161 101 6 chr10 63228749 63229283 -77087482 + LTR36 LTR ERV1 3 587 -24 198 306 69 0 chr10 63229320 63229392 -77087373 - L2 LINE L2 -1 3271 3195 21 36 0 0 chr10 63229403 63229431 -77087334 + AT_rich Low_complexity Low_complexity 1 28 0 676 271 37 28 chr10 63229461 63229651 -77087114 + LTR33 LTR ERVL 12 206 -315 1765 154 64 45 chr10 63229651 63230008 -77086757 - THE1B LTR MaLR 0 364 1 676 271 37 28 chr10 63230008 63230031 -77086734 + LTR33 LTR ERVL 206 227 -294 284 236 0 0 chr10 63230192 63230264 -77086501 + LTR33 LTR ERVL 436 507 -14 939 252 164 0 chr10 63231753 63232039 -77084726 + MLT1G LTR MaLR 10 342 -248 1543 206 125 82 chr10 63232051 63232771 -77083994 + LTR1B LTR ERV1 1 751 -75 301 279 157 0 chr10 63232884 63233024 -77083741 + MLT1G LTR MaLR 318 479 -76 1043 220 104 52 chr10 63233187 63233533 -77083232 - MLT1A1 LTR MaLR 0 365 2 186 329 197 0 chr10 63234082 63234158 -77082607 - L2 LINE L2 -5 3267 3177 2468 71 3 0 chr10 63235155 63235465 -77081300 - AluY SINE Alu 0 311 1 237 250 0 0 chr10 63235780 63235832 -77080933 + Tigger5 DNA MER2_type 4 55 -2268 201 278 75 68 chr10 63236070 63236203 -77080562 - MIR3 SINE MIR -69 139 6 398 343 6 17 chr10 63236338 63236513 -77080252 + L2 LINE L2 3109 3281 -32 1253 199 100 96 chr10 63236535 63237097 -77079668 - LTR49 LTR ERV1 -30 565 2 2214 71 0 3 chr10 63237563 63237874 -77078891 - AluY SINE Alu 0 310 1 221 0 35 0 chr10 63237944 63237973 -77078792 + (TG)n Simple_repeat Simple_repeat 2 31 0 2631 87 27 11 chr10 63238227 63238596 -77078169 - THE1C LTR MaLR 0 375 1 287 328 8 45 chr10 63238753 63238887 -77077878 + MIR SINE MIR 90 218 -44 495 223 91 0 chr10 63239216 63239337 -77077428 + MER94 DNA DNA 1 132 -2 469 263 109 9 chr10 63239701 63239896 -77076869 - MLT1L LTR MaLR -87 528 233 216 0 0 0 chr10 63239914 63239938 -77076827 + (TTTAG)n Simple_repeat Simple_repeat 3 26 0 831 288 125 41 chr10 63240021 63240588 -77076177 + L2 LINE L2 2675 3313 0 380 228 41 48 chr10 63240612 63240757 -77076008 - MLT1L LTR MaLR -471 144 1 312 275 114 8 chr10 63241979 63242110 -77074655 - L2 LINE L2 0 3313 3169 305 202 34 34 chr10 63242273 63242362 -77074403 - L1ME4a LINE L1 -21 6100 6012 876 257 98 10 chr10 63242362 63242754 -77074011 + LTR33 LTR ERVL 1 515 -6 288 273 142 0 chr10 63242811 63243016 -77073749 - L1ME4a LINE L1 -215 5906 5673 726 304 111 3 chr10 63243043 63243405 -77073360 - L1ME4a LINE L1 -1074 5072 4672 22 0 0 0 chr10 63243454 63243476 -77073289 + AT_rich Low_complexity Low_complexity 1 22 0 2839 216 41 56 chr10 63243481 63244545 -77072220 - L1ME1 LINE L1 -31 6135 5093 28 0 0 0 chr10 63244555 63244583 -77072182 + AT_rich Low_complexity Low_complexity 1 28 0 315 261 45 23 chr10 63244631 63244719 -77072046 - L1MC4 LINE L1 -1339 6703 6614 22 35 0 0 chr10 63244747 63244776 -77071989 + AT_rich Low_complexity Low_complexity 1 29 0 415 201 96 100 chr10 63244776 63245005 -77071760 - L1ME1 LINE L1 -1062 5084 4857 292 151 0 27 chr10 63245102 63245175 -77071590 + GA-rich Low_complexity Low_complexity 2 72 0 1299 85 94 14 chr10 63247078 63247290 -77069475 + L1PA10 LINE L1 5939 6167 -1 29 0 0 0 chr10 63247304 63247333 -77069432 + AT_rich Low_complexity Low_complexity 1 29 0 457 16 32 0 chr10 63247333 63247395 -77069370 + (TA)n Simple_repeat Simple_repeat 2 65 0 693 205 8 0 chr10 63247838 63247960 -77068805 - FLAM_C SINE Alu -20 123 1 446 307 111 46 chr10 63248569 63248937 -77067828 + MLT1K LTR MaLR 90 481 -107 225 244 219 16 chr10 63248941 63249064 -77067701 - MLT1L LTR MaLR -8 607 460 361 247 52 33 chr10 63249096 63249276 -77067489 - MLT1L LTR MaLR -257 358 110 30 59 0 0 chr10 63249476 63249527 -77067238 + AT_rich Low_complexity Low_complexity 1 51 0 2282 111 0 3 chr10 63249536 63249833 -77066932 + AluSx SINE Alu 1 296 -16 553 210 65 93 chr10 63250283 63250341 -77066424 + L1MC5 LINE L1 7480 7538 -423 2120 140 0 3 chr10 63250341 63250649 -77066116 - AluSx SINE Alu -5 307 1 553 210 65 93 chr10 63250649 63251051 -77065714 + L1MC5 LINE L1 7538 7927 -34 2061 106 11 3 chr10 63251387 63251699 -77065066 + AluSx SINE Alu 1 314 0 1682 189 16 45 chr10 63252014 63252389 -77064376 + MLT1A1 LTR MaLR 2 365 0 1194 155 18 18 chr10 63252389 63252761 -77064004 + MLT1A1-int LTR MaLR 1 432 -1303 192 77 0 0 chr10 63252761 63252787 -77063978 + (CTATT)n Simple_repeat Simple_repeat 5 30 0 306 245 159 49 chr10 63252804 63252967 -77063798 + MIR SINE MIR 23 203 -59 1002 76 62 0 chr10 63253314 63253458 -77063307 - L1PA11 LINE L1 -4 6170 6018 738 201 0 0 chr10 63253762 63253901 -77062864 - FLAM_C SINE Alu -4 139 1 21 36 0 0 chr10 63254274 63254302 -77062463 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 63255883 63255918 -77060847 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr10 63256555 63256585 -77060180 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr10 63256647 63256694 -77060071 + AT_rich Low_complexity Low_complexity 1 47 0 1693 153 16 33 chr10 63257318 63257625 -77059140 + AluJb SINE Alu 1 302 -10 5852 140 146 90 chr10 63257895 63259514 -77057251 - pTR5 LTR ERV1 -1 2437 606 1951 110 0 24 chr10 63259514 63259804 -77056961 + AluSq SINE Alu 31 313 0 2313 65 13 16 chr10 63260261 63260571 -77056194 - AluY SINE Alu -2 309 1 397 298 73 23 chr10 63261101 63261302 -77055463 - MIR SINE MIR -30 232 23 476 318 66 16 chr10 63261400 63261658 -77055107 - MLT1I LTR MaLR -60 349 79 2111 91 4 4 chr10 63262481 63262757 -77054008 - AluSg SINE Alu -34 276 1 319 252 99 60 chr10 63263408 63263559 -77053206 + L1MDa LINE L1 1318 1474 -5066 863 277 90 32 chr10 63263642 63264242 -77052523 + L1M4 LINE L1 4067 4701 -1445 1304 194 40 53 chr10 63264535 63264576 -77052189 - Charlie2 DNA MER1_type 0 2862 2822 2370 116 21 93 chr10 63264576 63264912 -77051853 - L1MA4A LINE L1 0 6303 5944 198 118 0 0 chr10 63264912 63264946 -77051819 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 2370 116 21 93 chr10 63264946 63264977 -77051788 - L1MA4A LINE L1 -359 5944 5912 1687 186 0 27 chr10 63264977 63265273 -77051492 - AluJb SINE Alu -24 288 1 2370 116 21 93 chr10 63265273 63265430 -77051335 - L1MA4A LINE L1 -391 5912 5816 1304 194 40 53 chr10 63265430 63265857 -77050908 - Charlie2 DNA MER1_type -40 2822 2400 250 243 29 0 chr10 63265852 63265922 -77050843 - Charlie2 DNA MER1_type -618 2244 2173 * 2072 113 7 0 chr10 63265949 63266232 -77050533 - AluSx SINE Alu -27 285 1 543 251 118 41 chr10 63266232 63266503 -77050262 - Charlie2 DNA MER1_type -2538 324 33 30 45 0 0 chr10 63266923 63266967 -77049798 + AT_rich Low_complexity Low_complexity 1 44 0 652 301 116 29 chr10 63267340 63267927 -77048838 - L1ME2 LINE L1 -261 5903 5266 274 274 189 47 chr10 63268110 63268216 -77048549 - MIR SINE MIR -70 192 72 440 92 0 0 chr10 63271951 63272016 -77044749 - MER116 DNA Mariner -1 79 15 339 317 118 27 chr10 63272779 63273000 -77043765 + MIR SINE MIR 21 261 -1 309 249 148 55 chr10 63273091 63273308 -77043457 - L1ME4a LINE L1 -16 6105 5869 902 195 115 10 chr10 63274291 63274491 -77042274 - MER58A DNA MER1_type -3 221 1 520 227 32 81 chr10 63274811 63274996 -77041769 - MER5B DNA MER1_type -2 176 1 1647 219 87 7 chr10 63276194 63276619 -77040146 - MLT1C LTR MaLR 0 467 9 262 320 73 68 chr10 63277474 63277680 -77039085 - MIR3 SINE MIR -1 207 1 361 263 108 65 chr10 63277999 63278033 -77038732 + MIR SINE MIR 69 100 -162 2143 108 0 38 chr10 63278033 63278348 -77038417 - AluSc SINE Alu -6 303 1 361 263 108 65 chr10 63278348 63278499 -77038266 + MIR SINE MIR 100 262 0 189 0 0 0 chr10 63279152 63279173 -77037592 + (CA)n Simple_repeat Simple_repeat 2 22 0 1778 197 0 0 chr10 63279857 63280162 -77036603 + AluJb SINE Alu 1 305 -7 2390 131 17 0 chr10 63280379 63280737 -77036028 - THE1B LTR MaLR 0 364 1 699 212 159 0 chr10 63281407 63281577 -77035188 + MER105 DNA DNA 2 198 -6 209 371 0 0 chr10 63282452 63282522 -77034243 + MIR SINE MIR 116 185 -77 257 238 63 98 chr10 63282861 63283004 -77033761 - L1MC4 LINE L1 0 8042 7905 731 261 123 99 chr10 63283042 63283396 -77033369 - L1MC4 LINE L1 -124 7918 7574 1874 152 0 14 chr10 63283396 63283686 -77033079 + AluJo SINE Alu 11 296 -16 731 261 123 99 chr10 63283686 63284496 -77032269 - L1MC4 LINE L1 -468 7574 6572 303 231 44 0 chr10 63284594 63284685 -77032080 - L1MC4 LINE L1 -5 8037 7943 1733 149 0 90 chr10 63284708 63285051 -77031714 - AluJo SINE Alu 0 312 1 210 265 0 0 chr10 63285105 63285154 -77031611 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 1995 129 139 16 chr10 63285188 63285569 -77031196 - MSTA LTR MaLR 0 428 1 587 166 115 29 chr10 63285721 63285860 -77030905 - L1ME2 LINE L1 -169 5995 5845 519 259 19 12 chr10 63285884 63286046 -77030719 - L1ME LINE L1 -5902 168 6 21 36 0 0 chr10 63286066 63286094 -77030671 + AT_rich Low_complexity Low_complexity 1 28 0 442 307 71 28 chr10 63286429 63286712 -77030053 - L1MEc LINE L1 -3873 2523 2229 22 35 0 0 chr10 63286824 63286853 -77029912 + AT_rich Low_complexity Low_complexity 1 29 0 450 152 63 0 chr10 63286911 63286990 -77029775 + MSTB LTR MaLR 343 426 0 312 315 20 34 chr10 63287077 63287226 -77029539 - HAL1b LINE L1 -517 831 685 624 282 130 21 chr10 63287244 63287768 -77028997 - HAL1b LINE L1 -703 645 65 1984 150 53 3 chr10 63288253 63288592 -77028173 - Tigger7 DNA MER2_type -11 2576 2221 1588 186 40 50 chr10 63288589 63288779 -77027986 - Tigger7 DNA MER2_type -2189 298 111 * 1900 163 0 3 chr10 63288779 63289085 -77027680 + AluJb SINE Alu 1 305 -7 1588 186 40 50 chr10 63289085 63289195 -77027570 - Tigger7 DNA MER2_type -2376 111 1 195 259 173 0 chr10 63289946 63290027 -77026738 - MIR SINE MIR -64 198 104 266 264 36 82 chr10 63290130 63290240 -77026525 - L2 LINE L2 -1 3312 3208 208 200 146 0 chr10 63293994 63294049 -77022716 - MIR3 SINE MIR -133 75 13 357 318 0 9 chr10 63294088 63294195 -77022570 + L2 LINE L2 3160 3265 -7 21 0 0 0 chr10 63295293 63295314 -77021451 + AT_rich Low_complexity Low_complexity 1 21 0 570 307 22 75 chr10 63296371 63296490 -77020275 + L1 LINE L1 4054 4178 -1968 1905 47 0 0 chr10 63296490 63296724 -77020041 + L1PA4 LINE L1 5919 6152 -3 570 307 22 75 chr10 63296724 63296779 -77019986 + L1 LINE L1 4178 4234 -1912 1735 130 16 65 chr10 63296779 63297087 -77019678 + AluSx SINE Alu 1 293 -19 570 307 22 75 chr10 63297087 63297325 -77019440 + L1 LINE L1 4234 4445 -1701 1619 165 20 23 chr10 63297563 63297711 -77019054 + AluJo SINE Alu 2 149 -163 2018 97 0 4 chr10 63297711 63297978 -77018787 + AluY SINE Alu 1 266 -45 1619 165 20 23 chr10 63297978 63298132 -77018633 + AluJo SINE Alu 149 303 -9 194 373 88 0 chr10 63301829 63301931 -77014834 - L2 LINE L2 -4 3268 3158 3285 180 61 69 chr10 63302472 63303359 -77013406 - L1MA9 LINE L1 -38 6274 5395 1817 145 24 71 chr10 63303866 63304245 -77012520 - MER46B DNA MER2_type 0 236 1 1231 225 65 127 chr10 63304377 63305187 -77011578 - L1MC5 LINE L1 -263 7698 6964 1389 159 124 21 chr10 63305187 63305470 -77011295 - AluJb SINE Alu 0 312 1 1231 225 65 127 chr10 63305470 63305697 -77011068 - L1MC5 LINE L1 -997 6964 6725 523 256 66 25 chr10 63305965 63306207 -77010558 + MER112 DNA MER1_type 2 253 -3 305 378 0 0 chr10 63306956 63307136 -77009629 + C-rich Low_complexity Low_complexity 1 180 0 279 164 18 0 chr10 63307497 63307552 -77009213 - MADE1 DNA Mariner 0 80 25 182 329 0 29 chr10 63307884 63307954 -77008811 + L3 LINE CR1 1443 1510 -67 738 308 22 4 chr10 63310552 63310779 -77005986 - MIR SINE MIR -30 232 2 1724 111 4 4 chr10 63311016 63311259 -77005506 - AluSq SINE Alu -70 243 1 1295 159 106 42 chr10 63311261 63311544 -77005221 - AluJo SINE Alu -11 301 1 351 306 98 34 chr10 63311888 63312153 -77004612 + L1MC4a LINE L1 5892 6173 -1635 2378 135 21 14 chr10 63312411 63312841 -77003924 + L1MA8 LINE L1 5854 6286 -5 504 172 71 0 chr10 63312888 63312987 -77003778 + MER103 DNA DNA 60 165 -1 194 222 74 49 chr10 63313190 63313271 -77003494 - L2 LINE L2 0 3313 3231 310 344 5 58 chr10 63313865 63314054 -77002711 - MIR SINE MIR -56 206 28 220 277 79 90 chr10 63314314 63314456 -77002309 + MER5B DNA MER1_type 1 142 -36 2180 129 0 37 chr10 63314456 63314806 -77001959 - MER1B DNA MER1_type 0 337 1 220 277 79 90 chr10 63314806 63314840 -77001925 + MER5B DNA MER1_type 142 175 -3 2127 122 3 0 chr10 63315344 63315648 -77001117 + AluSx SINE Alu 1 305 -7 505 284 70 25 chr10 63315909 63316194 -77000571 + AluSq SINE Alu 1 298 -5 520 169 22 88 chr10 63316753 63316889 -76999876 + L2 LINE L2 2731 2857 -457 1538 93 111 57 chr10 63316892 63317172 -76999593 + LTR9 LTR ERV1 1 295 -317 198 0 0 0 chr10 63317622 63317644 -76999121 + (A)n Simple_repeat Simple_repeat 1 22 0 277 156 0 0 chr10 63318644 63318689 -76998076 + MER2 DNA MER2_type 301 345 0 386 211 100 0 chr10 63318738 63318828 -76997937 + L1MC2 LINE L1 6217 6315 -29 467 320 82 5 chr10 63318905 63319099 -76997666 - MIR SINE MIR -53 209 1 224 387 83 6 chr10 63319276 63319457 -76997308 - L2 LINE L2 -2 3270 3076 301 264 0 56 chr10 63321472 63321544 -76995221 + L2 LINE L2 3246 3313 0 230 313 31 39 chr10 63321813 63321941 -76994824 + MIR SINE MIR 136 262 0 2033 154 3 0 chr10 63321992 63322304 -76994461 + AluSq SINE Alu 1 313 0 1604 77 0 0 chr10 63323256 63323465 -76993300 + L1PA7 LINE L1 5944 6152 -2 207 0 0 0 chr10 63324758 63324781 -76991984 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 462 220 43 14 chr10 63325829 63325970 -76990795 + MER113 DNA MER1_type? 6 150 -371 665 244 52 21 chr10 63326026 63326219 -76990546 + MER113 DNA MER1_type? 269 467 -54 667 237 37 21 chr10 63328567 63328757 -76988008 - L3 LINE CR1 -156 1421 1229 718 100 0 52 chr10 63330455 63330726 -76986039 + AluSx SINE Alu 13 312 0 404 325 41 0 chr10 63330755 63330924 -76985841 - MIR3 SINE MIR 0 208 33 21 57 0 0 chr10 63331396 63331431 -76985334 + GC_rich Low_complexity Low_complexity 1 35 0 427 244 84 66 chr10 63333279 63333492 -76983273 + MIR SINE MIR 10 226 -36 508 273 37 43 chr10 63333635 63333822 -76982943 + MIR SINE MIR 20 205 -57 302 33 7 7 chr10 63333915 63333966 -76982799 + MADE1 DNA Mariner 47 80 0 407 212 23 30 chr10 63334214 63334346 -76982419 + AluSg SINE Alu 10 140 -170 203 307 202 0 chr10 63336166 63336280 -76980485 - MIR SINE MIR -4 258 122 588 261 11 43 chr10 63336417 63336601 -76980164 + MER5B DNA MER1_type 1 178 0 290 321 170 38 chr10 63336708 63336920 -76979845 + MIR SINE MIR 22 261 -1 294 200 218 18 chr10 63339246 63339356 -76977409 - L2 LINE L2 0 3313 3182 288 0 0 0 chr10 63339392 63339424 -76977341 + (TG)n Simple_repeat Simple_repeat 1 32 0 2198 95 0 20 chr10 63339774 63340080 -76976685 + AluSp SINE Alu 1 300 -13 1184 257 118 5 chr10 63340869 63341309 -76975456 + LTR33A LTR ERVL 28 517 -6 291 268 191 19 chr10 63342482 63342639 -76974126 - MIR SINE MIR -9 253 70 256 171 53 13 chr10 63342848 63342924 -76973841 + (TA)n Simple_repeat Simple_repeat 2 80 0 1692 177 6 19 chr10 63343052 63343368 -76973397 + AluJo SINE Alu 1 312 0 22 0 0 0 chr10 63344426 63344448 -76972317 + AT_rich Low_complexity Low_complexity 1 22 0 208 344 44 70 chr10 63344701 63344928 -76971837 + L2 LINE L2 3021 3241 -31 201 147 0 0 chr10 63345750 63345784 -76970981 + (TC)n Simple_repeat Simple_repeat 1 34 0 328 286 29 9 chr10 63346084 63346189 -76970576 + MIR SINE MIR 49 155 -107 196 319 65 65 chr10 63347042 63347180 -76969585 + MIR SINE MIR 24 161 -101 2186 102 10 0 chr10 63347476 63347769 -76968996 + AluSx SINE Alu 1 296 -16 9346 22 4 0 chr10 63347769 63348939 -76967826 - L1P1 LINE L1 -689 5466 4292 3131 50 13 0 chr10 63348939 63349316 -76967449 + L1PA3 LINE L1 5769 6155 0 231 88 0 0 chr10 63349323 63349357 -76967408 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 2748 23 0 3 chr10 63349681 63349987 -76966778 + AluY SINE Alu 1 305 -6 621 286 69 14 chr10 63350020 63350296 -76966469 + L3 LINE CR1 1187 1477 -100 204 40 0 0 chr10 63350505 63350530 -76966235 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 521 234 144 12 chr10 63350801 63350968 -76965797 - MIR SINE MIR -71 191 3 2370 78 0 10 chr10 63352059 63352353 -76964412 - AluY SINE Alu -20 291 1 399 285 83 21 chr10 63353281 63353474 -76963291 + L1ME LINE L1 5386 5590 -531 283 317 20 0 chr10 63353566 63353667 -76963098 + L1ME LINE L1 5752 5854 -267 24 0 0 0 chr10 63353687 63353711 -76963054 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr10 63353830 63353865 -76962900 + AT_rich Low_complexity Low_complexity 1 35 0 1122 131 0 55 chr10 63354182 63354365 -76962400 + MER2 DNA MER2_type 1 173 -172 523 181 57 0 chr10 63354499 63354604 -76962161 - MER103 DNA DNA -36 130 20 2287 93 3 10 chr10 63355296 63355597 -76961168 - AluSg SINE Alu -11 299 1 189 0 0 0 chr10 63355805 63355826 -76960939 + (GA)n Simple_repeat Simple_repeat 1 21 0 578 227 165 0 chr10 63356140 63356316 -76960449 - L3 LINE CR1 -97 1480 1276 316 293 66 0 chr10 63356322 63356428 -76960337 + L2 LINE L2 3201 3313 0 186 365 65 0 chr10 63358157 63358264 -76958501 - L2 LINE L2 -32 3240 3127 633 323 164 27 chr10 63358518 63359477 -76957288 - L2 LINE L2 -425 2889 1800 725 313 9 9 chr10 63360513 63360746 -76956019 - MIR SINE MIR -18 244 12 1745 283 61 23 chr10 63360885 63361504 -76955261 - Tigger8 DNA MER2_type -17 649 7 187 273 0 0 chr10 63361518 63361562 -76955203 - L2 LINE L2 -9 3304 3261 343 253 0 0 chr10 63362173 63362260 -76954505 - MIR SINE MIR -55 153 67 420 20 0 0 chr10 63362506 63362555 -76954210 + (CA)n Simple_repeat Simple_repeat 1 49 0 554 227 50 90 chr10 63362555 63362833 -76953932 + L2 LINE L2 3047 3313 0 1107 273 142 15 chr10 63363068 63363526 -76953239 + LTR33 LTR ERVL 1 516 -5 286 336 115 0 chr10 63363556 63363678 -76953087 + MIR3 SINE MIR 38 173 -35 23 68 0 0 chr10 63363916 63363960 -76952805 + AT_rich Low_complexity Low_complexity 1 44 0 192 125 0 0 chr10 63364045 63364077 -76952688 - L2 LINE L2 0 3313 3282 995 123 6 6 chr10 63364082 63364244 -76952521 + HERVL-B3 LTR ERVL 5493 5654 0 2445 172 36 78 chr10 63364244 63364819 -76951946 + MLT2B3 LTR ERVL 1 551 -3 628 208 31 0 chr10 63365689 63365819 -76950946 + MIR SINE MIR 128 261 -1 188 167 21 0 chr10 63365819 63365867 -76950898 + CT-rich Low_complexity Low_complexity 2 50 0 261 152 0 0 chr10 63366157 63366203 -76950562 - L2 LINE L2 -2 3311 3266 751 254 68 32 chr10 63368617 63368869 -76947896 + MIR SINE MIR 2 262 0 2208 85 28 3 chr10 63369122 63369404 -76947361 - AluSx SINE Alu -17 295 7 1148 256 36 57 chr10 63369409 63369902 -76946863 - L2 LINE L2 -10 3303 2821 527 232 0 107 chr10 63370499 63370608 -76946157 + MIR SINE MIR 33 119 -143 2041 148 0 0 chr10 63370608 63370915 -76945850 + AluSx SINE Alu 1 307 0 527 232 0 107 chr10 63370915 63370981 -76945784 + MIR SINE MIR 119 190 -72 7475 184 128 13 chr10 63371924 63373498 -76943267 + MER52A LTR ERV1 1 1755 0 1364 239 95 39 chr10 63373734 63374248 -76942517 + L1ME3 LINE L1 5620 6162 0 534 292 111 76 chr10 63374435 63374754 -76942011 - L2 LINE L2 -38 3275 2969 219 88 0 0 chr10 63374754 63374788 -76941977 + (TG)n Simple_repeat Simple_repeat 1 34 0 534 292 111 76 chr10 63374788 63375172 -76941593 - L2 LINE L2 -344 2969 2545 411 328 103 39 chr10 63375438 63375670 -76941095 - MIR SINE MIR -8 254 8 390 264 70 48 chr10 63376264 63376491 -76940274 - MLT2F LTR ERVL -10 653 422 2329 108 8 33 chr10 63376491 63377054 -76939711 - MER51A LTR ERV1 0 634 1 998 287 82 23 chr10 63377059 63377449 -76939316 - MLT2F LTR ERVL -244 419 7 207 0 0 0 chr10 63377572 63377595 -76939170 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1025 179 0 0 chr10 63377603 63377765 -76939000 + AluJb SINE Alu 136 297 -15 212 293 47 66 chr10 63377804 63377910 -76938855 - L2 LINE L2 -6 3307 3204 397 321 163 23 chr10 63378009 63378224 -76938541 + MIR SINE MIR 15 259 -3 980 277 101 12 chr10 63379705 63380033 -76936732 - LTR33 LTR ERVL -155 366 10 347 335 61 46 chr10 63380143 63380339 -76936426 - MIR SINE MIR -46 216 20 215 61 30 0 chr10 63380604 63380637 -76936128 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 1786 207 66 37 chr10 63380892 63381346 -76935419 + MLT1C LTR MaLR 1 467 0 497 311 128 18 chr10 63381552 63381935 -76934830 - MLT1K LTR MaLR -3 585 161 618 253 24 57 chr10 63382283 63382622 -76934143 - MLT1F1 LTR MaLR 0 561 237 22 0 0 0 chr10 63382748 63382770 -76933995 + GC_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 63382815 63382838 -76933927 + (GA)n Simple_repeat Simple_repeat 2 24 0 564 263 77 16 chr10 63382863 63383057 -76933708 - MLT1F1 LTR MaLR -389 206 1 1381 263 85 26 chr10 63383156 63383613 -76933152 + LTR16C LTR ERVL 7 490 -1 191 125 375 0 chr10 63383616 63383656 -76933109 - MIR SINE MIR -160 102 48 243 273 0 0 chr10 63383794 63383849 -76932916 - L2 LINE L2 -11 3261 3207 1627 213 80 3 chr10 63384032 63384393 -76932372 - MLT1B LTR MaLR -1 389 1 891 67 17 0 chr10 63385126 63385245 -76931520 - MLT2A1 LTR ERVL -323 121 1 468 241 123 67 chr10 63385514 63385709 -76931056 - MIR SINE MIR -36 226 21 273 226 11 65 chr10 63386296 63386389 -76930376 - MIR SINE MIR -10 252 165 640 259 68 36 chr10 63386613 63386891 -76929874 - L1ME4a LINE L1 -95 6026 5740 45523 35 1 1 chr10 63386926 63393071 -76923694 - L1PA3 LINE L1 0 6155 9 794 88 0 0 chr10 63393140 63393242 -76923523 - L1PA3 LINE L1 -6044 102 1 411 280 79 85 chr10 63393368 63393686 -76923079 + L2 LINE L2 2931 3246 -26 10381 134 6 8 chr10 63393690 63395251 -76921514 - Tigger1 DNA MER2_type -861 1557 1 1858 133 16 29 chr10 63395278 63395594 -76921171 + AluSx SINE Alu 1 312 0 180 256 23 0 chr10 63395660 63395703 -76921062 + L3 LINE CR1 1533 1576 -1 273 357 76 13 chr10 63395719 63395876 -76920889 + MIR SINE MIR 21 187 -75 643 268 117 26 chr10 63396780 63397011 -76919754 - MIR SINE MIR -1 261 10 301 279 48 44 chr10 63397011 63397255 -76919510 + L1ME LINE L1 5346 5682 -439 225 313 68 0 chr10 63397493 63397640 -76919125 + LTR33 LTR ERVL 44 200 -321 298 244 116 0 chr10 63398220 63398306 -76918459 + L2 LINE L2 3176 3271 -1 1216 204 13 18 chr10 63398442 63398667 -76918098 - MER58A DNA MER1_type 0 224 1 379 281 21 0 chr10 63399111 63399207 -76917558 - MER94 DNA DNA -36 98 1 431 246 100 0 chr10 63400843 63400973 -76915792 + MIR SINE MIR 79 221 -41 2118 132 0 0 chr10 63401286 63401582 -76915183 - AluJb SINE Alu -16 296 1 299 388 98 0 chr10 63401681 63401864 -76914901 - L2 LINE L2 -534 2780 2580 184 161 0 0 chr10 63402130 63402161 -76914604 + MIR SINE MIR 118 148 -114 911 219 270 21 chr10 63402493 63402949 -76913816 - LTR50 LTR ERVL -2 793 452 2007 136 3 3 chr10 63402949 63403236 -76913529 + AluSg SINE Alu 1 287 -23 911 219 270 21 chr10 63403236 63403332 -76913433 - LTR50 LTR ERVL -343 452 3 1840 228 84 31 chr10 63403535 63404021 -76912744 + MLT1E LTR MaLR 18 529 -64 205 324 28 28 chr10 63404078 63404149 -76912616 - L2 LINE L2 -21 3292 3222 229 253 46 132 chr10 63404728 63404902 -76911863 - MIR SINE MIR -84 178 20 216 0 0 0 chr10 63407151 63407175 -76909590 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1587 127 75 56 chr10 63407437 63407704 -76909061 + AluSx SINE Alu 1 272 -40 639 26 0 0 chr10 63407704 63407781 -76908984 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 1244 88 0 6 chr10 63407781 63407962 -76908803 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 664 249 32 63 chr10 63408074 63408295 -76908470 - MIR SINE MIR -2 260 47 718 274 64 50 chr10 63408974 63409317 -76907448 + MLT1L LTR MaLR 154 501 -114 180 288 68 0 chr10 63409411 63409470 -76907295 + MIR SINE MIR 176 238 -24 322 339 51 0 chr10 63410169 63410287 -76906478 + MIR3 SINE MIR 37 160 -48 765 182 177 71 chr10 63410287 63410485 -76906280 - MER20 DNA MER1_type 0 219 1 313 302 169 36 chr10 63410493 63410718 -76906047 - MER102b DNA MER1_type 0 341 87 761 308 50 4 chr10 63410722 63410962 -76905803 + MIR SINE MIR 12 262 0 1047 260 111 7 chr10 63411867 63412274 -76904491 + L1ME4a LINE L1 5596 6044 -77 305 258 0 0 chr10 63412310 63412372 -76904393 + MER91A DNA MER1_type 1 62 -134 22 0 0 0 chr10 63412455 63412477 -76904288 + AT_rich Low_complexity Low_complexity 1 22 0 398 281 7 14 chr10 63412506 63412645 -76904120 - MER69 DNA AcHobo 0 2526 2389 356 227 0 0 chr10 63412790 63412856 -76903909 - MER69 DNA AcHobo -2460 66 1 1395 281 24 63 chr10 63413858 63414636 -76902129 + L1M4 LINE L1 1515 2409 -4416 328 281 132 71 chr10 63414633 63414965 -76901800 + HAL1 LINE L1 1245 1618 -889 * 1961 14 0 5 chr10 63414965 63415182 -76901583 - AluYb8 SINE Alu -4 314 99 328 281 132 71 chr10 63415182 63415340 -76901425 + HAL1 LINE L1 1618 1765 -742 25 31 0 0 chr10 63415360 63415392 -76901373 + AT_rich Low_complexity Low_complexity 1 32 0 270 197 13 26 chr10 63415733 63415809 -76900956 + (TG)n Simple_repeat Simple_repeat 2 76 0 1113 231 9 0 chr10 63416195 63416424 -76900341 + MIR SINE MIR 2 232 -30 245 350 0 19 chr10 63416442 63416545 -76900220 + L1MC5 LINE L1 7778 7878 -83 17599 66 2 6 chr10 63416651 63419601 -76897164 + L1PA6 LINE L1 3204 6152 -2 563 229 178 0 chr10 63420087 63420244 -76896521 + MER5A DNA MER1_type 3 187 -2 427 196 49 10 chr10 63420406 63420508 -76896257 - MER5B DNA MER1_type -3 175 70 486 120 0 0 chr10 63420716 63420791 -76895974 + (TA)n Simple_repeat Simple_repeat 1 75 0 24 0 0 0 chr10 63421907 63421931 -76894834 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 63423001 63423023 -76893742 + AT_rich Low_complexity Low_complexity 1 22 0 309 290 0 0 chr10 63424666 63424735 -76892030 - L2 LINE L2 -212 3060 2992 272 353 99 49 chr10 63425733 63426504 -76890261 - L2 LINE L2 -733 2581 1773 820 216 5 25 chr10 63426504 63426708 -76890057 + L1MA10 LINE L1 5115 5314 -832 831 32 0 0 chr10 63426708 63426803 -76889962 - AluY SINE Alu -11 300 206 1581 187 10 48 chr10 63426804 63427318 -76889447 + L1MA10 LINE L1 5306 5785 -457 8261 20 2 0 chr10 63427341 63428899 -76887866 + L1PA3 LINE L1 4596 6155 0 6888 167 21 17 chr10 63428912 63431235 -76885530 + L1PA16 LINE L1 3850 6165 -1 2472 140 29 40 chr10 63431227 63431678 -76885087 + L1MA10 LINE L1 5769 6214 -120 * 880 167 0 25 chr10 63431676 63431838 -76884927 + L1MA10 LINE L1 6177 6334 0 * 519 258 88 51 chr10 63432045 63432262 -76884503 - MLT1L LTR MaLR -26 589 365 2165 152 97 42 chr10 63432700 63433102 -76883663 - MSTB LTR MaLR -2 424 1 6613 270 61 27 chr10 63433169 63434761 -76882004 + L2 LINE L2 522 2213 -1101 1549 201 3 23 chr10 63434761 63435065 -76881700 + AluJo SINE Alu 1 298 -14 6613 270 61 27 chr10 63435065 63435685 -76881080 + L2 LINE L2 2213 2810 -504 667 215 94 11 chr10 63435704 63435895 -76880870 - Charlie4a DNA MER1_type -19 489 283 653 274 196 7 chr10 63435922 63436203 -76880562 + L2 LINE L2 2811 3144 -169 465 288 0 48 chr10 63436325 63436471 -76880294 + L2 LINE L2 3175 3313 0 21 0 0 0 chr10 63437074 63437095 -76879670 + AT_rich Low_complexity Low_complexity 1 21 0 665 224 139 68 chr10 63438203 63438484 -76878281 - LTR33A LTR ERVL -17 506 206 716 153 22 36 chr10 63439471 63439608 -76877157 + FRAM SINE Alu 2 136 -40 788 227 262 15 chr10 63439997 63440545 -76876220 + LTR50 LTR ERVL 13 794 -1 316 297 94 50 chr10 63441719 63441921 -76874844 + MIR SINE MIR 27 237 -25 394 298 216 9 chr10 63442566 63442784 -76873981 + MLT1K LTR MaLR 325 587 -1 2305 165 3 14 chr10 63442911 63443280 -76873485 - MLT1A1 LTR MaLR 0 365 1 623 109 20 0 chr10 63444159 63444260 -76872505 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 376 293 0 23 chr10 63444384 63444517 -76872248 - LTR67 LTR ERVL 0 557 428 216 0 0 0 chr10 63444779 63444803 -76871962 + (A)n Simple_repeat Simple_repeat 1 24 0 309 270 174 92 chr10 63444814 63445118 -76871647 + L2 LINE L2 2938 3266 -6 205 244 24 0 chr10 63445296 63445337 -76871428 - MER91A DNA MER1_type -12 184 143 210 159 43 0 chr10 63445443 63445512 -76871253 + (TA)n Simple_repeat Simple_repeat 2 73 0 333 305 52 58 chr10 63445527 63445681 -76871084 - MER91A DNA MER1_type -43 153 1 254 225 36 18 chr10 63446077 63446188 -76870577 + (TA)n Simple_repeat Simple_repeat 1 113 0 1401 299 92 14 chr10 63446193 63447301 -76869464 - L1ME3A LINE L1 -207 5963 4755 490 191 17 0 chr10 63447744 63447849 -76868916 - MIR SINE MIR -70 138 63 301 274 49 20 chr10 63447929 63448031 -76868734 + L2 LINE L2 3168 3272 0 757 258 153 43 chr10 63449123 63449568 -76867197 - L2 LINE L2 0 3313 2820 1285 252 78 41 chr10 63451164 63451652 -76865113 - LTR33 LTR ERVL -13 508 3 239 161 18 0 chr10 63451777 63451833 -76864932 + T-rich Low_complexity Low_complexity 4 60 0 330 307 46 13 chr10 63451881 63452034 -76864731 + MER117 DNA MER1_type 1 158 -39 828 172 207 6 chr10 63452383 63452473 -76864292 - MER3 DNA MER1_type 0 209 138 300 27 0 0 chr10 63452473 63452510 -76864255 + (CA)n Simple_repeat Simple_repeat 1 37 0 828 172 207 6 chr10 63452510 63452593 -76864172 - MER3 DNA MER1_type -71 138 1 674 279 65 9 chr10 63452668 63452883 -76863882 - MIR SINE MIR -25 237 11 808 287 65 26 chr10 63453150 63453457 -76863308 - LTR33 LTR ERVL -1 520 202 392 287 0 0 chr10 63453484 63453599 -76863166 - LTR33 LTR ERVL -406 115 1 374 338 53 56 chr10 63454084 63454350 -76862415 + L2 LINE L2 2844 3108 -164 291 222 0 0 chr10 63454561 63454615 -76862150 - MER53 DNA DNA 0 189 136 246 188 0 21 chr10 63454573 63454621 -76862144 + MER53 DNA DNA 23 69 -120 * 2955 136 23 23 chr10 63454621 63455497 -76861268 + L1MC1 LINE L1 5389 6315 -18 1852 152 14 3 chr10 63455572 63455862 -76860903 + AluSx SINE Alu 1 293 -19 374 71 89 0 chr10 63456326 63456382 -76860383 - MER53 DNA DNA -127 62 2 334 288 27 47 chr10 63456589 63456711 -76860054 + MIR SINE MIR 8 127 -81 1505 176 18 123 chr10 63456958 63457339 -76859426 - MER58B DNA MER1_type 0 341 1 274 277 17 101 chr10 63457436 63457555 -76859210 + MIR SINE MIR 42 150 -58 2064 138 7 0 chr10 63458614 63458912 -76857853 + AluSx SINE Alu 1 300 -12 275 352 48 9 chr10 63458936 63459041 -76857724 + MIR SINE MIR 42 150 -112 313 299 195 7 chr10 63459334 63459488 -76857277 + MIR SINE MIR 23 205 -57 779 290 112 16 chr10 63460003 63460379 -76856386 - LTR16A LTR ERVL -18 432 21 329 282 41 6 chr10 63461179 63461349 -76855416 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 129 0 0 chr10 63462976 63463007 -76853758 + (A)n Simple_repeat Simple_repeat 1 31 0 231 370 54 0 chr10 63463503 63463595 -76853170 - L3b LINE CR1 -98 1485 1389 459 0 0 0 chr10 63466104 63466155 -76850610 + (CA)n Simple_repeat Simple_repeat 2 52 0 973 146 161 36 chr10 63466155 63466347 -76850418 - MER46A DNA MER2_type -2 234 19 368 159 64 9 chr10 63466352 63466681 -76850084 + (TA)n Simple_repeat Simple_repeat 1 346 0 1910 119 61 0 chr10 63466715 63466993 -76849772 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 63467101 63467127 -76849638 + (GGA)n Simple_repeat Simple_repeat 2 27 0 511 275 16 66 chr10 63467186 63467368 -76849397 - MIR SINE MIR -70 192 20 693 266 203 16 chr10 63467490 63467869 -76848896 + MLT1J2 LTR MaLR 1 450 0 381 58 0 0 chr10 63468032 63468084 -76848681 + (TC)n Simple_repeat Simple_repeat 1 52 0 1281 196 89 12 chr10 63468160 63468604 -76848161 - MER69 DNA AcHobo -4 2522 2001 * 1323 297 39 28 chr10 63468587 63468790 -76847975 - MER69 DNA AcHobo -652 574 375 1654 171 153 6 chr10 63468790 63469117 -76847648 + THE1C LTR MaLR 1 375 0 1323 297 39 28 chr10 63469117 63469344 -76847421 - MER69 DNA AcHobo -851 375 139 382 259 71 0 chr10 63469880 63469965 -76846800 + L2 LINE L2 3199 3289 -24 683 196 12 9 chr10 63469974 63470301 -76846464 + GA-rich Low_complexity Low_complexity 1 328 0 498 246 18 0 chr10 63470318 63470432 -76846333 + MIR SINE MIR 114 229 -33 1202 144 0 0 chr10 63471877 63472057 -76844708 - AluSg/x SINE Alu -1 311 132 329 316 83 25 chr10 63472222 63472433 -76844332 + MIR SINE MIR 36 262 0 4335 100 3 5 chr10 63472680 63473260 -76843505 - L1PA10 LINE L1 -5 6163 5585 624 262 71 9 chr10 63473921 63474146 -76842619 - MIR SINE MIR 0 262 24 1152 210 37 33 chr10 63474415 63474687 -76842078 - ORSL DNA AcHobo 0 275 3 383 267 61 8 chr10 63476336 63476467 -76840298 + MIR3 SINE MIR 22 159 -49 199 310 138 0 chr10 63477067 63477154 -76839611 - MIR SINE MIR -117 145 47 180 97 0 0 chr10 63477248 63477279 -76839486 + (TGAG)n Simple_repeat Simple_repeat 3 33 0 324 306 145 26 chr10 63477836 63478029 -76838736 - MIR SINE MIR -28 234 19 218 313 16 0 chr10 63478369 63478433 -76838332 + MIR SINE MIR 35 99 -109 309 298 66 44 chr10 63478475 63478656 -76838109 - MIR SINE MIR -33 229 45 240 294 0 98 chr10 63478651 63478753 -76838012 + MIR3 SINE MIR 99 190 -18 * 195 42 0 0 chr10 63479195 63479219 -76837546 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 457 127 0 0 chr10 63479220 63479318 -76837447 - AluSg/x SINE Alu 0 316 219 284 285 30 85 chr10 63479318 63479483 -76837282 - MER5A DNA MER1_type -27 162 7 422 228 0 0 chr10 63479895 63479974 -76836791 + MER94 DNA DNA 1 79 -55 833 164 65 84 chr10 63479985 63480167 -76836598 + L1PB4 LINE L1 5947 6127 -29 1898 145 0 3 chr10 63480167 63480476 -76836289 - AluSx SINE Alu 0 308 1 833 164 65 84 chr10 63480476 63480506 -76836259 + L1PB4 LINE L1 6127 6156 0 263 182 0 91 chr10 63480511 63480588 -76836177 + MER94 DNA DNA 62 131 -3 557 225 156 17 chr10 63480942 63481115 -76835650 + MIR SINE MIR 28 224 -38 864 246 194 15 chr10 63481239 63481742 -76835023 - MLT1G LTR MaLR -5 525 1 265 328 161 16 chr10 63482125 63482311 -76834454 + L2 LINE L2 2871 3083 -189 1771 161 13 33 chr10 63482677 63482976 -76833789 - AluJo SINE Alu -19 293 1 242 73 24 0 chr10 63483006 63483047 -76833718 + (CA)n Simple_repeat Simple_repeat 2 43 0 342 67 0 0 chr10 63483411 63483456 -76833309 + (CA)n Simple_repeat Simple_repeat 1 45 0 185 176 0 0 chr10 63484113 63484147 -76832618 - L2 LINE L2 -2 3311 3278 240 227 0 0 chr10 63485493 63485537 -76831228 + MIR SINE MIR 216 259 -3 568 289 119 41 chr10 63488546 63488981 -76827784 - MLT1L LTR MaLR 0 615 48 1770 238 89 48 chr10 63489340 63489674 -76827091 + MLT1L LTR MaLR 5 375 -240 2448 78 0 7 chr10 63489674 63489981 -76826784 + AluY SINE Alu 1 305 -6 1770 238 89 48 chr10 63489981 63490231 -76826534 + MLT1L LTR MaLR 375 613 -2 2279 108 0 0 chr10 63491338 63491634 -76825131 - AluSx SINE Alu -16 296 1 569 318 47 8 chr10 63492091 63492327 -76824438 - MARNA DNA Mariner -13 573 329 503 294 164 27 chr10 63493070 63493363 -76823402 + L3 LINE CR1 388 720 -857 227 256 22 44 chr10 63493408 63493498 -76823267 - L1MC4 LINE L1 -1340 6702 6615 1058 298 88 70 chr10 63493498 63494183 -76822582 + L3 LINE CR1 865 1561 -16 23 0 0 0 chr10 63494631 63494654 -76822111 + AT_rich Low_complexity Low_complexity 1 23 0 1107 150 0 98 chr10 63494858 63495129 -76821636 + AluJo SINE Alu 86 333 0 731 292 33 49 chr10 63496071 63496437 -76820328 + L2 LINE L2 2954 3313 0 33405 103 7 60 chr10 63496925 63500565 -76816200 + L1PA7 LINE L1 12 3147 -3007 2111 97 48 0 chr10 63500565 63500855 -76815910 + AluSp SINE Alu 3 306 -7 33405 103 7 60 chr10 63500855 63503710 -76813055 + L1PA7 LINE L1 3147 6152 -2 829 222 0 0 chr10 63506427 63506580 -76810185 - FRAM SINE Alu -22 154 2 1905 144 3 3 chr10 63507012 63507303 -76809462 + AluJb SINE Alu 4 294 -18 1967 128 26 4 chr10 63508121 63508535 -76808230 - L1MC1 LINE L1 0 6333 5920 293 288 43 18 chr10 63508535 63508698 -76808067 - L1PA8A LINE L1 -273 5858 5692 1624 150 0 83 chr10 63509206 63509532 -76807233 + AluJb SINE Alu 3 301 -11 1219 151 9 53 chr10 63509650 63509875 -76806890 + MER20 DNA MER1_type 4 218 -1 4305 148 12 32 chr10 63510580 63511305 -76805460 - MER50 LTR ERV1 -23 711 1 576 284 58 7 chr10 63512635 63512790 -76803975 - MIR3 SINE MIR -26 182 20 383 121 212 0 chr10 63513225 63513291 -76803474 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 63513570 63513591 -76803174 + AT_rich Low_complexity Low_complexity 1 21 0 317 189 244 31 chr10 63514449 63514576 -76802189 - MIR3 SINE MIR -17 191 38 461 252 298 8 chr10 63515368 63515606 -76801159 + L2 LINE L2 2501 2807 -507 590 305 57 73 chr10 63515804 63516175 -76800590 + L2 LINE L2 2947 3311 -2 1581 171 21 25 chr10 63516562 63516848 -76799917 - AluJo SINE Alu -22 290 6 292 295 11 42 chr10 63516882 63516977 -76799788 - MER5A DNA MER1_type -78 111 20 217 239 201 30 chr10 63517215 63517349 -76799416 - MIR SINE MIR -102 160 4 2288 67 0 17 chr10 63517641 63517938 -76798827 + AluY SINE Alu 1 292 -19 307 228 25 0 chr10 63517973 63518052 -76798713 + LTR30 LTR ERV1 538 618 -104 210 37 0 0 chr10 63518063 63518090 -76798675 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 273 313 30 10 chr10 63518096 63518195 -76798570 - MER5A DNA MER1_type -53 136 36 * 381 255 59 0 chr10 63518108 63518210 -76798555 + MER5B DNA MER1_type 66 173 -5 378 286 32 8 chr10 63518222 63518348 -76798417 - MIR SINE MIR -57 151 23 550 229 69 64 chr10 63518388 63518576 -76798189 + MIR SINE MIR 58 246 -16 2182 106 0 0 chr10 63524030 63524313 -76792452 + AluSq SINE Alu 22 304 -9 322 322 0 0 chr10 63534321 63534411 -76782354 - MIR SINE MIR -87 121 32 290 366 138 33 chr10 63535863 63536196 -76780569 - L2 LINE L2 -32 3240 2873 445 268 45 81 chr10 63537115 63537240 -76779525 + MIR SINE MIR 16 106 -156 2422 96 0 13 chr10 63537240 63537553 -76779212 + AluSc SINE Alu 1 309 0 445 268 45 81 chr10 63537553 63537703 -76779062 + MIR SINE MIR 106 260 -2 495 285 57 0 chr10 63537714 63537872 -76778893 - MIR SINE MIR -15 247 81 374 289 186 5 chr10 63539303 63539497 -76777268 - MIR SINE MIR 0 262 34 283 210 74 12 chr10 63539507 63539588 -76777177 + MIR SINE MIR 60 145 -63 3502 58 25 0 chr10 63540619 63541050 -76775715 + MLT2A1 LTR ERVL 1 442 -2 607 188 71 0 chr10 63541210 63541322 -76775443 - L2 LINE L2 -1 3312 3193 513 329 111 19 chr10 63541380 63541757 -76775008 - L3b LINE CR1 -59 1524 1113 323 264 12 56 chr10 63541815 63541977 -76774788 - MIR SINE MIR -53 155 43 2110 116 43 15 chr10 63542890 63543218 -76773547 + MER1B DNA MER1_type 1 337 0 461 277 184 20 chr10 63543261 63543608 -76773157 + L2 LINE L2 2866 3269 -3 313 323 0 0 chr10 63543667 63543763 -76773002 + MIR3 SINE MIR 109 204 -4 204 293 111 20 chr10 63544728 63544827 -76771938 - L2 LINE L2 -15 3257 3150 560 173 189 27 chr10 63546901 63547086 -76769679 + MER113 DNA MER1_type? 1 215 -306 211 234 21 0 chr10 63547226 63547273 -76769492 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 304 211 137 11 chr10 63547274 63547369 -76769396 + L1MC4 LINE L1 6595 6701 -1341 236 271 47 0 chr10 63547370 63547455 -76769310 - L1MC4 LINE L1 -1340 6702 6614 191 114 29 0 chr10 63547455 63547490 -76769275 + (TATG)n Simple_repeat Simple_repeat 2 37 0 321 89 0 0 chr10 63547524 63547569 -76769196 + (TG)n Simple_repeat Simple_repeat 2 46 0 360 227 77 153 chr10 63547688 63548054 -76768711 + L1ME4a LINE L1 1269 1606 -4924 601 116 21 0 chr10 63548076 63548171 -76768594 + L1MA7 LINE L1 6012 6108 -183 1300 71 0 0 chr10 63548172 63548350 -76768415 + AluSg/x SINE Alu 129 306 0 845 200 11 0 chr10 63548351 63548536 -76768229 + L1MA7 LINE L1 6103 6289 -2 4139 144 138 82 chr10 63548561 63548911 -76767854 + L1MC3 LINE L1 6701 7030 -755 286 260 52 0 chr10 63548911 63548988 -76767777 + MLT1F1 LTR MaLR 45 125 -442 4139 144 138 82 chr10 63548988 63549586 -76767179 + L1MC3 LINE L1 7030 7783 -2 225 260 0 70 chr10 63549756 63549856 -76766909 + L1ME4a LINE L1 1848 1940 -4600 1802 257 64 43 chr10 63549885 63550213 -76766552 + L1ME4a LINE L1 5043 5363 -1195 2328 98 0 3 chr10 63550213 63550510 -76766255 + AluSx SINE Alu 1 296 -16 1802 257 64 43 chr10 63550510 63550783 -76765982 + L1ME4a LINE L1 5363 5629 -929 2279 86 0 46 chr10 63550783 63551107 -76765658 + AluY SINE Alu 2 310 -1 1802 257 64 43 chr10 63551107 63551791 -76764974 + L1ME4a LINE L1 5629 6355 -203 384 198 189 27 chr10 63551791 63551902 -76764863 + MIR SINE MIR 58 186 -76 189 107 0 0 chr10 63551955 63551983 -76764782 + (TTA)n Simple_repeat Simple_repeat 2 29 0 266 288 41 0 chr10 63552064 63552137 -76764628 - MIR SINE MIR -75 187 112 2231 69 38 3 chr10 63552663 63552953 -76763812 + AluY SINE Alu 1 300 -11 730 278 49 20 chr10 63552987 63553232 -76763533 - MIR SINE MIR -1 261 10 557 304 101 8 chr10 63553412 63553649 -76763116 - MIR SINE MIR 0 262 4 368 239 115 0 chr10 63553702 63553815 -76762950 - L2 LINE L2 0 3313 3188 380 159 61 98 chr10 63554183 63554315 -76762450 + L1ME4a LINE L1 6361 6487 -28 5644 134 30 4 chr10 63554462 63554790 -76761975 - L1MB3 LINE L1 -1 6182 5864 2073 192 6 6 chr10 63554790 63555155 -76761610 - MLT1A1 LTR MaLR 0 365 1 5644 134 30 4 chr10 63555155 63555808 -76760957 - L1MB3 LINE L1 -319 5864 5180 400 281 55 0 chr10 63556232 63556378 -76760387 + MER103 DNA DNA 12 165 -1 527 270 65 35 chr10 63557052 63557436 -76759329 - L1ME4a LINE L1 -157 5964 5561 767 308 90 63 chr10 63557618 63558216 -76758549 + L3 LINE CR1 886 1499 -78 352 329 126 0 chr10 63558615 63558782 -76757983 + MER117 DNA MER1_type 1 188 -9 289 296 23 0 chr10 63559639 63559727 -76757038 - MIR SINE MIR -76 132 43 418 261 28 33 chr10 63559827 63560007 -76756758 + CT-rich Low_complexity Low_complexity 1 179 0 333 0 0 0 chr10 63561387 63561424 -76755341 + (TG)n Simple_repeat Simple_repeat 1 37 0 518 213 101 58 chr10 63561463 63561651 -76755114 - MER117 DNA MER1_type -1 196 1 1837 129 68 96 chr10 63562784 63563179 -76753586 + MLT1B LTR MaLR 1 384 -6 795 252 57 51 chr10 63564016 63564516 -76752249 + L2 LINE L2 2666 3187 -126 2281 132 0 3 chr10 63564542 63564861 -76751904 + MER1B DNA MER1_type 22 339 0 587 176 34 8 chr10 63564864 63564983 -76751782 + L2 LINE L2 3192 3313 0 2220 105 0 3 chr10 63565257 63565566 -76751199 + AluSx SINE Alu 1 308 0 236 240 0 20 chr10 63566294 63566344 -76750421 + polypyrimidine Low_complexity Low_complexity 4 52 0 182 293 23 68 chr10 63566479 63566612 -76750153 - L2 LINE L2 -166 3106 2980 315 267 111 15 chr10 63567170 63567305 -76749460 - MIR3 SINE MIR -8 200 53 2321 107 0 7 chr10 63567386 63567694 -76749071 - AluSx SINE Alu -6 306 1 1448 123 51 8 chr10 63568316 63568569 -76748196 - L1MA9 LINE L1 -1 6311 6048 521 292 120 2 chr10 63568658 63568942 -76747823 - LTR33 LTR ERVL 0 521 140 219 344 16 23 chr10 63569033 63569161 -76747604 + MIR3 SINE MIR 81 207 -1 2272 109 7 0 chr10 63569425 63569728 -76747037 - AluSc SINE Alu -4 305 1 480 200 141 18 chr10 63572867 63573037 -76743728 - L1MC3 LINE L1 0 7785 7595 873 227 49 120 chr10 63573678 63574044 -76742721 + MER102b DNA MER1_type 2 341 0 1655 102 0 0 chr10 63574426 63574642 -76742123 - AluSg/x SINE Alu -11 301 86 338 247 25 0 chr10 63575046 63575127 -76741638 + L2 LINE L2 3230 3312 -1 343 224 0 41 chr10 63575425 63575523 -76741242 - MER103 DNA DNA -69 97 4 249 108 0 0 chr10 63576419 63576456 -76740309 + (A)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr10 63576521 63576544 -76740221 + AT_rich Low_complexity Low_complexity 1 23 0 1261 284 28 28 chr10 63576917 63577381 -76739384 + L2 LINE L2 2841 3304 -9 273 356 75 24 chr10 63577955 63578250 -76738515 + L2 LINE L2 2449 2758 -556 561 148 6 49 chr10 63579207 63579369 -76737396 + GA-rich Low_complexity Low_complexity 2 156 0 210 373 64 9 chr10 63579546 63579656 -76737109 + L2 LINE L2 3122 3237 -35 2295 84 3 7 chr10 63580113 63580410 -76736355 + AluSg1 SINE Alu 1 296 -13 556 287 44 39 chr10 63580893 63581231 -76735534 + L1ME3A LINE L1 5542 5881 -240 733 262 65 4 chr10 63581316 63581545 -76735220 + MIR SINE MIR 4 246 -16 338 308 46 8 chr10 63582042 63582172 -76734593 - MER5A DNA MER1_type -48 141 7 776 294 36 8 chr10 63582849 63583101 -76733664 + MIR SINE MIR 3 261 -1 459 0 0 0 chr10 63583782 63583833 -76732932 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2045 106 29 0 chr10 63583835 63584108 -76732657 - AluSx SINE Alu -31 281 1 945 204 121 63 chr10 63584241 63584609 -76732156 + MLT1C LTR MaLR 38 467 0 321 185 49 12 chr10 63584718 63584799 -76731966 + MLT1L LTR MaLR 1 84 -531 25 0 0 0 chr10 63585228 63585253 -76731512 + AT_rich Low_complexity Low_complexity 1 25 0 787 193 184 5 chr10 63585253 63585471 -76731294 + L1ME3A LINE L1 5901 6157 -13 242 294 64 37 chr10 63586505 63586614 -76730151 - L2 LINE L2 -215 3057 2946 1694 128 78 0 chr10 63586789 63587047 -76729718 + AluSq SINE Alu 1 278 -35 2298 45 41 31 chr10 63587047 63587335 -76729430 + AluY SINE Alu 3 295 -16 309 26 0 0 chr10 63587364 63587402 -76729363 + (TG)n Simple_repeat Simple_repeat 2 39 0 4579 176 70 14 chr10 63587402 63587439 -76729326 - L1MB3 LINE L1 -15 6168 6134 2079 122 10 0 chr10 63587439 63587734 -76729031 - AluSg SINE Alu -12 298 1 4579 176 70 14 chr10 63587734 63588358 -76728407 - L1MB3 LINE L1 -49 6134 5433 258 56 0 0 chr10 63588358 63588394 -76728371 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 4579 176 70 14 chr10 63588394 63588728 -76728037 - L1MB3 LINE L1 -750 5433 5119 2910 100 28 2 chr10 63588731 63589229 -76727536 - L1MA4A LINE L1 -6 6297 5734 2877 189 18 70 chr10 63589232 63589683 -76727082 - L1MB3 LINE L1 -977 5169 4766 1997 124 33 0 chr10 63589683 63589993 -76726772 - AluSx SINE Alu 0 319 1 2877 189 18 70 chr10 63589993 63590250 -76726515 - L1MB3 LINE L1 -1380 4766 4497 2966 174 39 2 chr10 63590768 63591333 -76725432 + L1MB4 LINE L1 5578 6163 -17 463 191 278 12 chr10 63591691 63591864 -76724901 + ORSL DNA AcHobo 1 219 -56 491 269 76 31 chr10 63592044 63592267 -76724498 + MIR SINE MIR 1 233 -29 180 231 0 19 chr10 63592866 63592918 -76723847 + L2 LINE L2 3171 3221 -92 693 191 41 116 chr10 63594273 63594490 -76722275 + L1ME3 LINE L1 5916 6148 -14 1677 170 11 11 chr10 63594490 63594772 -76721993 + AluJo SINE Alu 1 282 -30 207 0 0 0 chr10 63594775 63594798 -76721967 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 693 191 41 116 chr10 63594798 63594843 -76721922 + L1ME3 LINE L1 6150 6162 0 305 239 66 0 chr10 63595999 63596124 -76720641 + L1M1 LINE L1 5677 5785 -517 1690 189 0 21 chr10 63596167 63596458 -76720307 - AluJb SINE Alu -26 286 2 370 250 29 79 chr10 63597330 63597470 -76719295 + L2 LINE L2 3140 3272 0 228 67 0 0 chr10 63598137 63598167 -76718598 + (GA)n Simple_repeat Simple_repeat 1 30 0 466 290 130 10 chr10 63598470 63598677 -76718088 - MIR SINE MIR 0 262 31 570 313 118 50 chr10 63598880 63599356 -76717409 + L3 LINE CR1 1058 1565 -12 2151 118 0 0 chr10 63600071 63600417 -76716348 + AluSx SINE Alu 3 348 0 487 328 99 4 chr10 63600564 63600796 -76715969 - MIR SINE MIR -8 254 1 255 213 49 0 chr10 63600839 63600900 -76715865 - L2 LINE L2 -23 3249 3186 259 283 33 0 chr10 63600954 63601046 -76715719 - L2 LINE L2 -210 3062 2968 977 168 56 0 chr10 63601733 63601912 -76714853 - MER5A DNA MER1_type 0 189 1 336 269 256 0 chr10 63602123 63602283 -76714482 - Charlie8 DNA MER1_type -2147 270 70 539 215 62 0 chr10 63602328 63602458 -76714307 - L1MD3 LINE L1 -332 7663 7526 604 242 56 25 chr10 63602531 63602692 -76714073 + MER63A DNA MER1_type 38 203 -7 304 239 29 6 chr10 63602841 63602943 -76713822 + MIR SINE MIR 17 119 -89 268 179 26 0 chr10 63602954 63603032 -76713733 + (TA)n Simple_repeat Simple_repeat 1 80 0 206 218 18 18 chr10 63603057 63603112 -76713653 + (TA)n Simple_repeat Simple_repeat 2 56 0 189 0 0 0 chr10 63603112 63603133 -76713632 + (CA)n Simple_repeat Simple_repeat 2 22 0 2012 135 0 0 chr10 63604185 63604651 -76712114 + AluSx SINE Alu 1 466 0 1310 49 0 22 chr10 63604467 63604754 -76712011 + (GAAA)n Simple_repeat Simple_repeat 1 283 0 778 247 88 31 chr10 63604765 63604992 -76711773 - MIR SINE MIR -3 259 20 429 280 30 36 chr10 63605261 63605429 -76711336 + MIR3 SINE MIR 21 187 -21 768 194 161 0 chr10 63607246 63607426 -76709339 + MER3 DNA MER1_type 1 209 0 1921 142 0 35 chr10 63609630 63609941 -76706824 - AluJo SINE Alu -10 302 3 2095 127 0 3 chr10 63610615 63610921 -76705844 + AluSq SINE Alu 1 305 0 354 301 171 20 chr10 63610927 63611126 -76705639 - MIR SINE MIR -15 247 19 423 250 76 42 chr10 63611374 63611518 -76705247 + L3 LINE CR1 347 495 -1082 538 302 57 92 chr10 63611688 63612112 -76704653 + L2 LINE L2 2862 3270 -2 789 309 112 47 chr10 63612140 63612862 -76703903 + L3 LINE CR1 736 1504 -73 218 242 109 109 chr10 63613073 63613201 -76703564 + MIR3 SINE MIR 28 155 -53 251 315 22 11 chr10 63613246 63613335 -76703430 + MER5A DNA MER1_type 2 91 -98 193 281 188 31 chr10 63613277 63613373 -76703392 - MER5A DNA MER1_type -23 166 56 * 191 86 0 29 chr10 63615755 63615790 -76700975 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 1585 216 33 90 chr10 63616664 63617083 -76699682 + MER34 LTR ERV1 1 380 -162 1699 166 6 46 chr10 63617083 63617408 -76699357 - AluJo SINE Alu 0 312 1 1585 216 33 90 chr10 63617408 63617563 -76699202 + MER34 LTR ERV1 380 542 0 351 0 0 0 chr10 63617802 63617841 -76698924 + (CA)n Simple_repeat Simple_repeat 1 39 0 279 286 150 8 chr10 63617886 63618019 -76698746 - MIR3 SINE MIR -37 171 20 386 316 6 19 chr10 63618476 63618634 -76698131 + L2 LINE L2 3158 3313 0 236 352 19 56 chr10 63618803 63619007 -76697758 + MIR SINE MIR 20 217 -45 196 319 14 0 chr10 63620061 63620130 -76696635 - L2 LINE L2 -665 2649 2580 1839 185 0 10 chr10 63620493 63620807 -76695958 + AluJb SINE Alu 1 311 -1 444 82 0 0 chr10 63620809 63620870 -76695895 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 408 312 157 51 chr10 63621189 63621583 -76695182 - L2 LINE L2 0 3272 2837 186 133 0 0 chr10 63623366 63623396 -76693369 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 277 256 111 43 chr10 63623536 63623653 -76693112 - MIR SINE MIR -122 140 16 389 269 132 16 chr10 63624191 63624373 -76692392 - MIR SINE MIR -12 250 48 182 31 0 62 chr10 63625156 63625188 -76691577 + (CAAAAA)n Simple_repeat Simple_repeat 4 33 0 1289 142 10 0 chr10 63625581 63625786 -76690979 - L1PA16 LINE L1 -9 6157 5951 741 250 93 42 chr10 63627914 63628246 -76688519 - HAL1 LINE L1 -105 2402 2054 225 284 90 15 chr10 63628548 63628682 -76688083 + L2 LINE L2 3160 3303 -10 248 348 92 56 chr10 63629182 63629596 -76687169 + L2 LINE L2 2844 3272 0 437 239 0 11 chr10 63631046 63631134 -76685631 + MIR3 SINE MIR 115 201 -7 1002 195 42 116 chr10 63634124 63634285 -76682480 + L1M4 LINE L1 2278 2449 -3697 2060 108 0 65 chr10 63634285 63634609 -76682156 - AluSx SINE Alu -9 303 1 1002 195 42 116 chr10 63634609 63634827 -76681938 + L1M4 LINE L1 2449 2629 -3517 532 174 41 0 chr10 63634888 63634986 -76681779 + MER58B DNA MER1_type 239 340 -1 453 189 90 0 chr10 63635001 63635112 -76681653 + L1M4 LINE L1 2606 2726 -3420 * 775 206 12 0 chr10 63635110 63635275 -76681490 + L1M4 LINE L1 4721 4887 -1259 734 227 92 0 chr10 63635314 63635477 -76681288 - MIR SINE MIR -72 190 13 2350 95 3 7 chr10 63636609 63636915 -76679850 + AluSx SINE Alu 1 305 -7 3911 174 44 25 chr10 63637018 63637767 -76678998 + MER4E LTR ERV1 1 763 -16 6992 98 37 3 chr10 63637838 63638960 -76677805 + L1MA3 LINE L1 5144 6305 0 938 107 40 0 chr10 63639019 63639169 -76677596 - L1MA9 LINE L1 0 6312 6157 2414 140 15 15 chr10 63639242 63639713 -76677052 - MER52C LTR ERV1 -788 490 20 22 35 0 0 chr10 63639860 63639889 -76676876 + AT_rich Low_complexity Low_complexity 1 29 0 10002 164 115 32 chr10 63641710 63642158 -76674607 - Charlie5 DNA MER1_type -1 2623 2214 2154 57 25 21 chr10 63642158 63642478 -76674287 + AluY SINE Alu 1 321 0 10002 164 115 32 chr10 63642478 63643171 -76673594 - Charlie5 DNA MER1_type -410 2214 1580 8432 99 86 26 chr10 63643171 63644463 -76672302 - SVA Other Other 0 1386 18 10002 164 115 32 chr10 63644463 63644992 -76671773 - Charlie5 DNA MER1_type -1044 1580 1097 195 100 0 0 chr10 63644992 63645022 -76671743 + (TG)n Simple_repeat Simple_repeat 2 31 0 10002 164 115 32 chr10 63645022 63645768 -76670997 - Charlie5 DNA MER1_type -1527 1097 2 623 194 0 0 chr10 63646442 63646535 -76670230 + AluJo SINE Alu 2 94 -218 1853 124 58 0 chr10 63646537 63646828 -76669937 + AluSx SINE Alu 1 308 -4 1482 145 0 13 chr10 63646837 63647065 -76669700 + AluJo SINE Alu 84 308 -4 2193 116 0 3 chr10 63647065 63647358 -76669407 + AluSx SINE Alu 1 292 -20 459 246 20 46 chr10 63647372 63647567 -76669198 + L1ME4a LINE L1 5774 5963 -158 33 43 0 0 chr10 63647693 63647740 -76669025 + AT_rich Low_complexity Low_complexity 1 47 0 1764 61 5 0 chr10 63647821 63648035 -76668730 - L1PA5 LINE L1 -7 6147 5933 782 210 131 51 chr10 63649634 63650068 -76666697 - HAL1 LINE L1 -23 2484 2016 229 283 0 0 chr10 63650069 63650122 -76666643 - U6 snRNA snRNA 0 107 55 631 282 77 44 chr10 63650750 63651124 -76665641 - MLT1J LTR MaLR -3 611 216 1570 165 127 4 chr10 63653059 63653319 -76663446 + AluJb SINE Alu 1 292 -10 235 379 117 19 chr10 63653357 63653407 -76663358 + L2 LINE L2 1755 1799 -1515 2273 98 0 7 chr10 63653407 63653704 -76663061 - AluSx SINE Alu -13 299 5 235 379 117 19 chr10 63653704 63654073 -76662692 + L2 LINE L2 1799 2215 -1099 397 280 195 45 chr10 63654263 63654463 -76662302 + MIR SINE MIR 32 261 -1 1769 171 14 3 chr10 63654827 63655113 -76661652 - AluJo SINE Alu -23 289 1 875 183 13 0 chr10 63655211 63655364 -76661401 + MER3 DNA MER1_type 1 155 -54 214 354 89 41 chr10 63655437 63655728 -76661037 + L2 LINE L2 2871 3175 -97 1725 105 18 13 chr10 63656060 63656289 -76660476 - MER30 DNA MER1_type 0 230 1 303 316 57 19 chr10 63656754 63656912 -76659853 + L2 LINE L2 3147 3310 -3 729 271 60 50 chr10 63657021 63657404 -76659361 + L1ME LINE L1 5378 5764 -357 403 299 66 19 chr10 63657508 63657784 -76658981 + L1ME4a LINE L1 5611 5916 -205 279 169 0 17 chr10 63657822 63657881 -76658884 + L1ME4a LINE L1 6060 6117 -4 258 336 94 7 chr10 63658629 63658778 -76657987 - MIR SINE MIR -90 172 11 225 196 0 0 chr10 63658825 63658876 -76657889 + GA-rich Low_complexity Low_complexity 2 52 0 193 29 29 29 chr10 63659340 63659375 -76657390 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 210 225 0 0 chr10 63660178 63660218 -76656547 + C-rich Low_complexity Low_complexity 2 41 0 210 105 0 0 chr10 63660536 63660574 -76656191 + (T)n Simple_repeat Simple_repeat 1 38 0 2318 94 0 0 chr10 63660588 63660874 -76655891 + AluSx SINE Alu 2 287 -25 2052 139 0 0 chr10 63661568 63661856 -76654909 - AluSx SINE Alu -16 296 9 789 168 95 95 chr10 63662017 63662285 -76654480 + MLT1B LTR MaLR 1 228 -162 5509 48 0 0 chr10 63662421 63663089 -76653676 + SVA Other Other 740 1407 0 2310 107 0 0 chr10 63663276 63663575 -76653190 + AluSc SINE Alu 1 299 -10 44980 37 3 1 chr10 63663585 63669726 -76647039 + L1PA4 LINE L1 2 6154 -1 1968 153 0 3 chr10 63670329 63670623 -76646142 - AluSx SINE Alu -17 295 3 2292 158 3 18 chr10 63670884 63671226 -76645539 - MER1B DNA MER1_type 0 337 1 200 297 16 0 chr10 63672803 63672867 -76643898 + GA-rich Low_complexity Low_complexity 4 68 0 428 283 107 0 chr10 63672867 63673044 -76643721 - MIR SINE MIR -4 258 63 240 291 65 58 chr10 63673692 63673843 -76642922 + MER5A DNA MER1_type 2 142 -36 2245 133 0 3 chr10 63674603 63674912 -76641853 + AluSx SINE Alu 1 308 -4 249 132 0 0 chr10 63675504 63675542 -76641223 - MER103 DNA DNA -115 51 14 1081 232 80 56 chr10 63676803 63677178 -76639587 - MLT1J LTR MaLR -31 480 97 1112 287 94 5 chr10 63677251 63677624 -76639141 - MLT1J LTR MaLR -104 407 2 1925 153 3 0 chr10 63677629 63677916 -76638849 - AluJb SINE Alu -24 288 1 407 322 84 35 chr10 63678716 63678943 -76637822 + MIR SINE MIR 15 252 -10 217 290 104 40 chr10 63680190 63680343 -76636422 - MIR SINE MIR -56 206 52 198 179 26 0 chr10 63680759 63680798 -76635967 + L2 LINE L2 3233 3272 0 306 138 0 0 chr10 63680883 63680941 -76635824 + (TTCA)n Simple_repeat Simple_repeat 2 59 0 988 147 83 78 chr10 63680949 63681167 -76635598 + MER20 DNA MER1_type 1 219 0 1581 213 16 13 chr10 63681191 63681553 -76635212 - AluJo SINE Alu 0 312 1 24 53 0 0 chr10 63681612 63681650 -76635115 + AT_rich Low_complexity Low_complexity 1 38 0 2231 231 24 24 chr10 63682815 63683357 -76633408 + MLT1F LTR MaLR 1 542 0 2127 138 7 0 chr10 63683427 63683724 -76633041 + AluSx SINE Alu 1 299 -13 1666 158 30 15 chr10 63683861 63684012 -76632753 - L1MA9 LINE L1 0 6312 6165 237 83 0 0 chr10 63684012 63684048 -76632717 + (TG)n Simple_repeat Simple_repeat 1 36 0 1666 158 30 15 chr10 63684048 63684232 -76632533 - L1MA9 LINE L1 -147 6165 5972 539 89 0 0 chr10 63684234 63684313 -76632452 - L1MA9 LINE L1 -316 5873 5795 228 373 0 0 chr10 63685187 63685254 -76631511 + MIR SINE MIR 12 78 -184 634 257 29 6 chr10 63685339 63685510 -76631255 + MIR SINE MIR 82 256 -6 180 111 0 0 chr10 63685515 63685542 -76631223 + (TTAG)n Simple_repeat Simple_repeat 4 30 0 273 29 0 0 chr10 63685819 63685853 -76630912 + (CA)n Simple_repeat Simple_repeat 1 34 0 305 241 40 92 chr10 63686714 63687257 -76629508 + L1MCa LINE L1 988 1550 -4866 405 0 0 0 chr10 63687258 63687303 -76629462 + (CA)n Simple_repeat Simple_repeat 2 46 0 2728 97 11 0 chr10 63687412 63687772 -76628993 - THE1B LTR MaLR 0 364 1 7211 115 19 2 chr10 63687772 63688849 -76627916 - THE1B-int LTR MaLR 0 1580 485 1878 99 113 0 chr10 63688849 63689141 -76627624 - THE1B LTR MaLR -39 325 1 246 105 0 0 chr10 63689217 63689255 -76627510 + (CTTG)n Simple_repeat Simple_repeat 2 39 0 648 234 4 151 chr10 63690917 63691070 -76625695 + MIR SINE MIR 37 211 -51 2337 69 0 7 chr10 63691070 63691373 -76625392 + AluY SINE Alu 1 301 -10 1643 163 0 58 chr10 63691376 63691671 -76625094 + AluJb SINE Alu 1 278 -34 648 234 4 151 chr10 63691671 63691693 -76625072 + MIR SINE MIR 213 237 -25 756 52 0 0 chr10 63691693 63691790 -76624975 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 648 234 4 151 chr10 63691790 63691874 -76624891 + MIR SINE MIR 237 262 0 186 305 49 49 chr10 63692095 63692177 -76624588 + L2 LINE L2 3123 3204 -68 206 276 95 26 chr10 63692265 63692381 -76624384 - L2 LINE L2 -13 3300 3177 1010 181 44 6 chr10 63693467 63693649 -76623116 - MER5A DNA MER1_type 0 189 1 3413 51 8 0 chr10 63794695 63795088 -76521677 + SVA Other Other 989 1384 -2 1324 120 5 5 chr10 63795097 63795289 -76521476 + AluSg/x SINE Alu 120 311 -1 2456 152 64 4 chr10 63795290 63795743 -76521022 - Tigger1 DNA MER2_type -1827 591 112 1302 179 9 107 chr10 63795772 63795909 -76520856 + AluJo SINE Alu 1 150 -162 2237 118 3 0 chr10 63795909 63796205 -76520560 - AluSx SINE Alu -15 297 1 1302 179 9 107 chr10 63796205 63796216 -76520549 + AluJo SINE Alu 150 160 -152 2279 99 3 0 chr10 63796216 63796509 -76520256 - AluSp SINE Alu -19 294 1 1302 179 9 107 chr10 63796509 63796705 -76520060 + AluJo SINE Alu 160 312 0 2242 121 0 0 chr10 63796705 63797002 -76519763 + AluSc SINE Alu 1 297 -12 471 36 12 108 chr10 63797003 63797061 -76519704 - Charlie5 DNA MER1_type -314 2310 2261 2411 86 0 10 chr10 63797061 63797363 -76519402 + AluSq SINE Alu 1 299 -14 471 36 12 108 chr10 63797363 63797387 -76519378 - Charlie5 DNA MER1_type -363 2261 2236 1309 186 48 21 chr10 63797403 63797693 -76519072 + L1M3 LINE L1 5501 5798 -385 2017 134 0 0 chr10 63797694 63797977 -76518788 - AluSx SINE Alu -9 303 21 234 231 16 116 chr10 63797997 63798052 -76518713 - Charlie5 DNA MER1_type -2512 112 74 2216 98 0 7 chr10 63798052 63798348 -76518417 - AluSc SINE Alu -15 294 1 234 231 16 116 chr10 63798348 63798413 -76518352 - Charlie5 DNA MER1_type -2550 74 4 2022 166 0 0 chr10 63798611 63798918 -76517847 + AluSx SINE Alu 2 308 -4 1380 400 7 0 chr10 63799482 63799772 -76516993 + AluSg1 SINE Alu 1 292 -17 1799 116 9 113 chr10 63800003 63800340 -76516425 - AluSx SINE Alu 0 302 1 2350 109 6 10 chr10 63800355 63800668 -76516097 - AluSx SINE Alu 0 312 1 2265 115 3 3 chr10 63800670 63800983 -76515782 - AluSp SINE Alu 0 313 1 663 175 29 0 chr10 63801016 63801119 -76515646 - FLAM_C SINE Alu -32 111 6 2539 58 0 0 chr10 63801511 63801805 -76514960 + AluY SINE Alu 1 294 -17 1212 141 33 48 chr10 63802030 63802246 -76514519 - Tigger6 DNA MER2_type -16 1581 1368 2244 134 0 6 chr10 63802246 63802560 -76514205 + AluSx SINE Alu 1 312 0 1212 141 33 48 chr10 63802560 63802613 -76514152 - Tigger6 DNA MER2_type -229 1368 1316 1271 197 107 0 chr10 63802624 63802914 -76513851 - Tigger6 DNA MER2_type -1276 321 1 838 93 9 0 chr10 63803116 63803224 -76513541 + AluSc SINE Alu 1 109 -200 298 291 8 0 chr10 63803534 63803651 -76513114 + AluSp/q SINE Alu 183 300 -3 1205 81 0 7 chr10 63803726 63803874 -76512891 - AluSp SINE Alu -166 147 1 23 0 0 0 chr10 63804174 63804197 -76512568 + AT_rich Low_complexity Low_complexity 1 23 0 1848 14 0 29 chr10 63804197 63804405 -76512360 - SVA Other Other -6 1380 1179 3928 39 7 0 chr10 63804432 63804894 -76511871 - SVA Other Other -851 535 71 608 13 26 0 chr10 63804894 63804970 -76511795 + (GGGAGA)n Simple_repeat Simple_repeat 4 81 0 2123 137 0 9 chr10 63805068 63805383 -76511382 - AluSx SINE Alu 0 312 1 1834 174 7 3 chr10 63805455 63805754 -76511011 - AluJo SINE Alu -12 300 1 243 158 26 26 chr10 63806067 63806143 -76510622 - L1ME4a LINE L1 -113 6008 5933 1554 125 61 14 chr10 63806632 63806911 -76509854 + AluJo SINE Alu 1 292 -20 23 33 0 0 chr10 63806974 63807004 -76509761 + GC_rich Low_complexity Low_complexity 1 30 0 1054 98 17 40 chr10 63807280 63807453 -76509312 + AluJb SINE Alu 136 304 -8 1764 155 3 23 chr10 63807453 63807762 -76509003 + AluJo SINE Alu 1 303 -9 1423 104 142 8 chr10 63807770 63808038 -76508727 + L1MA5A LINE L1 5989 6292 -5 2427 76 0 0 chr10 63808046 63808335 -76508430 + AluY SINE Alu 1 289 -22 2097 150 0 7 chr10 63808468 63808774 -76507991 + AluSx SINE Alu 1 304 -8 1763 132 13 36 chr10 63808840 63809143 -76507622 - AluSx SINE Alu -9 303 8 1132 172 30 7 chr10 63809193 63809524 -76507241 - MER74C LTR ERVL -128 430 13 2326 105 0 3 chr10 63809661 63809974 -76506791 - AluSx SINE Alu 0 312 1 1069 78 0 0 chr10 63809974 63810103 -76506662 - AluSq/x SINE Alu -184 129 1 1662 161 0 97 chr10 63810106 63810273 -76506492 - AluJo SINE Alu -15 297 176 2354 89 0 7 chr10 63810273 63810564 -76506201 - AluSg SINE Alu -21 289 1 1662 161 0 97 chr10 63810564 63810725 -76506040 - AluJo SINE Alu -136 176 1 1373 133 62 8 chr10 63810728 63810984 -76505781 - L1MB3 LINE L1 -355 5828 5559 439 133 27 0 chr10 63811095 63811170 -76505595 - L1MB3 LINE L1 -599 5584 5508 2171 119 0 0 chr10 63811175 63811461 -76505304 + AluSx SINE Alu 1 286 -26 761 111 7 96 chr10 63811679 63811792 -76504973 + AluJb SINE Alu 9 110 -202 207 0 0 0 chr10 63811792 63811815 -76504950 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 761 111 7 96 chr10 63811815 63811836 -76504929 + AluJb SINE Alu 110 131 -181 1855 64 0 8 chr10 63813402 63813636 -76503129 - AluSq SINE Alu -9 304 73 2676 49 0 0 chr10 63813636 63813942 -76502823 - AluY SINE Alu -4 307 1 1282 133 188 28 chr10 63814250 63814389 -76502376 + AluSc SINE Alu 1 116 -183 2007 121 3 36 chr10 63814389 63814728 -76502037 + AluSq SINE Alu 1 313 0 1282 133 188 28 chr10 63814728 63814843 -76501922 + AluSc SINE Alu 116 296 -3 2571 55 7 0 chr10 63815189 63815497 -76501268 - AluY SINE Alu -1 310 1 297 254 249 29 chr10 63815748 63815953 -76500812 + MIR SINE MIR 13 262 0 2410 83 7 0 chr10 63816190 63816492 -76500273 + AluSq SINE Alu 1 304 -9 2411 61 0 3 chr10 63816526 63816820 -76499945 + AluY SINE Alu 1 293 -18 860 113 0 57 chr10 63817387 63817528 -76499237 - FLAM_C SINE Alu 0 133 1 2338 100 0 0 chr10 63817624 63817915 -76498850 - AluSx SINE Alu -8 304 14 2278 99 0 13 chr10 63818020 63818322 -76498443 - AluSq SINE Alu -15 298 1 1041 152 98 0 chr10 63818619 63818803 -76497962 + AluJo SINE Alu 1 202 -110 270 305 23 40 chr10 63818996 63819170 -76497595 + C-rich Low_complexity Low_complexity 2 172 0 2402 101 0 0 chr10 63820212 63820510 -76496255 + AluSx SINE Alu 2 299 -13 233 232 0 0 chr10 63820702 63820758 -76496007 + (TA)n Simple_repeat Simple_repeat 1 56 0 292 298 30 0 chr10 63821045 63821176 -76495589 + L1ME3A LINE L1 4942 5076 -1070 46 62 0 0 chr10 63821181 63821262 -76495503 + AT_rich Low_complexity Low_complexity 1 81 0 594 135 0 0 chr10 63821320 63821409 -76495356 + AluJ/FLAM SINE Alu 2 90 -222 2382 88 3 3 chr10 63821552 63821848 -76494917 - AluSx SINE Alu -16 296 1 612 286 160 6 chr10 63821850 63822206 -76494559 + L1ME3A LINE L1 5386 5796 -374 325 241 310 7 chr10 63822219 63822364 -76494401 + MER5A DNA MER1_type 1 189 0 462 285 98 11 chr10 63822389 63822663 -76494102 + L1ME3A LINE L1 5851 6148 -22 649 277 69 36 chr10 63822726 63823024 -76493741 + L1MC/D LINE L1 2901 3205 -2941 373 307 88 48 chr10 63823576 63823827 -76492938 + L1MC/D LINE L1 3850 4110 -2036 1020 264 91 19 chr10 63823845 63824411 -76492354 + L1MC/D LINE L1 5209 5823 -779 1419 183 9 99 chr10 63824417 63824740 -76492025 + AluSx SINE Alu 6 299 -13 1763 143 35 41 chr10 63825794 63826108 -76490657 + AluJo SINE Alu 1 312 0 355 293 222 13 chr10 63827397 63827636 -76489129 + L2 LINE L2 3025 3313 0 383 352 74 6 chr10 63827760 63827922 -76488843 - MIR SINE MIR -25 237 65 23 33 0 0 chr10 63828074 63828104 -76488661 + AT_rich Low_complexity Low_complexity 1 30 0 181 206 0 0 chr10 63829443 63829477 -76487288 - MER5B DNA MER1_type -21 157 124 507 211 18 0 chr10 63832020 63832129 -76484636 - MER5B DNA MER1_type -58 120 10 505 211 117 8 chr10 63832545 63832673 -76484092 + MER31B LTR ERV1 1 142 -324 1979 136 14 10 chr10 63832675 63832970 -76483795 + AluSx SINE Alu 1 296 -16 478 245 93 0 chr10 63833116 63833255 -76483510 - MIR SINE MIR -51 211 60 3761 99 2 6 chr10 63833772 63834285 -76482480 + MER9 LTR ERVK 1 511 0 194 333 48 0 chr10 63834489 63834594 -76482171 - L2 LINE L2 -517 2797 2688 406 138 0 0 chr10 63834800 63834858 -76481907 - Alu SINE Alu -15 295 238 4294 141 19 63 chr10 63834858 63834977 -76481788 - LTR49-int LTR ERV1 -985 5346 5223 2156 112 0 7 chr10 63834977 63835264 -76481501 - AluSg1 SINE Alu -14 295 11 4294 141 19 63 chr10 63835264 63835624 -76481141 - LTR49-int LTR ERV1 -1108 5223 4849 2316 101 10 0 chr10 63835624 63835922 -76480843 + AluSq SINE Alu 1 301 -12 4294 141 19 63 chr10 63835922 63836108 -76480657 - LTR49-int LTR ERV1 -1482 4849 4787 2189 102 158 13 chr10 63836108 63836482 -76480283 + MSTA LTR MaLR 1 428 0 4294 141 19 63 chr10 63836482 63836694 -76480071 - LTR49-int LTR ERV1 -1544 4787 4567 323 197 14 0 chr10 63836694 63836765 -76480000 - LTR49-int LTR ERV1 -1945 4386 4315 1722 154 21 7 chr10 63837570 63837849 -76478916 + AluJb SINE Alu 6 288 -24 1036 176 37 5 chr10 63838006 63838194 -76478571 - AluJb SINE Alu -32 280 87 1733 170 24 3 chr10 63838246 63838366 -76478399 + AluJb SINE Alu 1 117 -195 209 57 29 0 chr10 63838366 63838401 -76478364 + (TAAAA)n Simple_repeat Simple_repeat 3 38 0 1733 170 24 3 chr10 63838401 63838568 -76478197 + AluJb SINE Alu 117 294 -18 674 244 50 0 chr10 63838571 63838751 -76478014 + L1MA4 LINE L1 2943 3131 -4434 1937 169 128 56 chr10 63838776 63839331 -76477434 + LTR61 LTR ERV1 1 595 0 2222 189 32 22 chr10 63839331 63839947 -76476818 + HERV3 LTR ERV1 2 528 -7898 11747 190 9 1 chr10 63839997 63841943 -76474822 + HERV3 LTR ERV1 608 2567 -5859 11817 186 8 16 chr10 63842044 63844005 -76472760 + HERV3 LTR ERV1 2531 4475 -3951 3266 137 8 6 chr10 63844005 63844515 -76472250 - MER9 LTR ERVK 0 511 1 2184 84 17 0 chr10 63844520 63844807 -76471958 - HERVK9 LTR ERVK -3 7066 5635 32070 90 3 1 chr10 63844892 63849044 -76467721 - HERVK9 LTR ERVK -282 5634 1474 594 132 11 0 chr10 63849046 63849137 -76467628 - MER9 LTR ERVK -380 131 40 16175 194 35 16 chr10 63849152 63851944 -76464821 + HERV3 LTR ERV1 4471 7324 -1102 1904 110 68 0 chr10 63851944 63852228 -76464537 + AluSp SINE Alu 1 302 0 16175 194 35 16 chr10 63852228 63852438 -76464327 + HERV3 LTR ERV1 7324 7529 -897 686 60 60 0 chr10 63852438 63852538 -76464227 + LTR61 LTR ERV1 490 595 0 15083 166 22 42 chr10 63852555 63853562 -76463203 + L1MA4 LINE L1 3162 4188 -3531 2237 117 3 0 chr10 63853562 63853860 -76462905 - AluSx SINE Alu -13 299 1 15083 166 22 42 chr10 63853860 63853887 -76462878 + L1MA4 LINE L1 4188 4214 -3505 1942 168 3 0 chr10 63853887 63854196 -76462569 + AluJb SINE Alu 1 310 -2 15083 166 22 42 chr10 63854196 63854466 -76462299 + L1MA4 LINE L1 4214 4488 -3231 1853 179 3 3 chr10 63854466 63854773 -76461992 + AluJb SINE Alu 1 307 -5 15083 166 22 42 chr10 63854773 63856354 -76460411 + L1MA4 LINE L1 4488 6100 -1619 2166 123 3 3 chr10 63856354 63856654 -76460111 + AluSx SINE Alu 1 300 -12 15083 166 22 42 chr10 63856654 63858156 -76458609 + L1MA4 LINE L1 6100 7453 -266 1933 122 49 75 chr10 63858156 63858541 -76458224 - THE1C LTR MaLR 0 375 1 15083 166 22 42 chr10 63858541 63858792 -76457973 + L1MA4 LINE L1 7453 7708 -11 22 35 0 0 chr10 63858792 63858821 -76457944 + AT_rich Low_complexity Low_complexity 1 29 0 1650 251 105 74 chr10 63858839 63859295 -76457470 - L2 LINE L2 -1480 1834 1339 1599 160 4 15 chr10 63859295 63859557 -76457208 + AluJb SINE Alu 1 259 -53 1650 251 105 74 chr10 63859557 63859947 -76456818 - L2 LINE L2 -1975 1339 962 1897 228 41 22 chr10 63860096 63860588 -76456177 + MLT1D LTR MaLR 5 505 0 287 213 161 92 chr10 63860813 63861062 -76455703 + L2 LINE L2 3047 3312 -1 314 314 0 0 chr10 63863935 63864037 -76452728 + MIR3 SINE MIR 82 183 -25 2126 121 7 0 chr10 63864132 63864422 -76452343 + AluSx SINE Alu 1 292 -20 205 344 21 21 chr10 63865424 63865520 -76451245 - L2 LINE L2 -1691 1623 1528 333 141 0 31 chr10 63866011 63866075 -76450690 + MER5C DNA MER1_type 263 324 0 490 342 51 29 chr10 63866115 63866431 -76450334 - L2 LINE L2 -3 3310 2988 565 266 126 84 chr10 63866499 63866988 -76449777 - L2 LINE L2 -466 2848 2326 1816 103 0 0 chr10 63866988 63867221 -76449544 - AluSx SINE Alu -79 233 1 565 266 126 84 chr10 63867221 63867358 -76449407 - L2 LINE L2 -988 2326 2196 1094 104 0 83 chr10 63868823 63868860 -76447905 - AluSg/x SINE Alu 0 312 274 243 0 0 0 chr10 63868860 63868887 -76447878 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1094 104 0 83 chr10 63868887 63869041 -76447724 - AluSg/x SINE Alu -38 274 137 600 271 68 8 chr10 63869055 63869321 -76447444 + L1ME4a LINE L1 5576 5857 -264 241 77 51 0 chr10 63869334 63869373 -76447392 - MER116 DNA Mariner -1 79 39 1662 176 17 0 chr10 63869403 63869692 -76447073 + AluJb SINE Alu 1 294 -18 1907 85 0 4 chr10 63870144 63870391 -76446374 - AluSg/x SINE Alu 0 312 67 633 175 39 71 chr10 63870519 63870605 -76446160 - MER106B DNA MER1_type -910 149 69 2429 95 0 0 chr10 63870605 63870909 -76445856 + AluSx SINE Alu 1 304 -8 633 175 39 71 chr10 63870909 63870976 -76445789 - MER106B DNA MER1_type -990 69 1 1884 115 48 24 chr10 63871160 63871455 -76445310 + AluJb SINE Alu 1 302 -10 252 291 43 26 chr10 63871797 63871914 -76444851 - L2 LINE L2 -239 3033 2915 1115 146 0 0 chr10 63872023 63872187 -76444578 + AluSg/x SINE Alu 127 290 -20 2157 125 0 3 chr10 63872651 63872956 -76443809 - AluSx SINE Alu -8 304 1 273 305 12 0 chr10 63873698 63873780 -76442985 - L1MC/D LINE L1 -2306 5502 5420 277 223 32 32 chr10 63873792 63873886 -76442879 - HAL1 LINE L1 -186 2321 2228 22 0 0 0 chr10 63874046 63874068 -76442697 + AT_rich Low_complexity Low_complexity 1 22 0 753 181 31 0 chr10 63874159 63874286 -76442479 - FLAM_C SINE Alu -11 132 2 474 260 189 26 chr10 63874402 63874617 -76442148 - HAL1 LINE L1 -848 1659 1480 300 27 0 0 chr10 63874617 63874654 -76442111 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 474 260 189 26 chr10 63874654 63874934 -76441831 - HAL1 LINE L1 -1027 1480 1083 299 56 0 0 chr10 63875972 63876008 -76440757 - LTR24C LTR ERV1 -81 554 519 198 0 0 0 chr10 63876295 63876317 -76440448 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 195 381 63 16 chr10 63876319 63876571 -76440194 + L2 LINE L2 2219 2482 -832 2047 150 0 0 chr10 63877240 63877533 -76439232 + AluSx SINE Alu 1 293 -19 890 155 6 42 chr10 63879987 63880155 -76436610 + AluJb SINE Alu 30 191 -121 253 246 16 0 chr10 63880655 63880716 -76436049 + HAL1 LINE L1 635 696 -1811 1317 217 161 21 chr10 63880768 63880967 -76435798 + L1M4 LINE L1 2454 2624 -3522 1667 190 17 0 chr10 63880967 63881257 -76435508 - AluJo SINE Alu -17 295 1 1317 217 161 21 chr10 63881257 63881540 -76435225 + L1M4 LINE L1 2624 3004 -3142 1996 247 99 12 chr10 63881547 63882436 -76434329 + L1M4 LINE L1 3038 4193 -1953 1817 160 3 17 chr10 63882436 63882730 -76434035 + AluJo SINE Alu 1 290 -22 1996 247 99 12 chr10 63882730 63882863 -76433902 + L1M4 LINE L1 4193 4313 -1833 2222 88 0 30 chr10 63883047 63883344 -76433421 - AluSx SINE Alu -4 308 21 603 244 325 15 chr10 63883347 63883805 -76432960 + L1M4 LINE L1 4731 5330 -816 1065 98 0 0 chr10 63883806 63883939 -76432826 + AluSq/x SINE Alu 1 133 -180 225 0 0 0 chr10 63883939 63883964 -76432801 + (A)n Simple_repeat Simple_repeat 1 25 0 1156 138 26 119 chr10 63884065 63884099 -76432666 + Tigger1 DNA MER2_type 2175 2211 -207 2187 106 13 0 chr10 63884099 63884402 -76432363 - AluSx SINE Alu -5 307 1 690 186 7 64 chr10 63884410 63884550 -76432215 - FLAM_C SINE Alu -1 132 1 1156 138 26 119 chr10 63884550 63884596 -76432169 + Tigger1 DNA MER2_type 2218 2267 -151 1832 133 47 11 chr10 63884596 63884874 -76431891 + AluSx SINE Alu 8 295 -17 1156 138 26 119 chr10 63884874 63885052 -76431713 + Tigger1 DNA MER2_type 2267 2418 0 294 136 68 0 chr10 63885058 63885117 -76431648 + L2 LINE L2 1986 2048 -1266 1623 175 3 30 chr10 63885124 63885290 -76431475 - AluJb SINE Alu -17 295 139 2322 93 3 7 chr10 63885290 63885592 -76431173 - AluSp SINE Alu -10 303 3 1623 175 3 30 chr10 63885592 63885728 -76431037 - AluJb SINE Alu -173 139 1 1273 115 39 43 chr10 63885733 63885941 -76430824 - AluJb SINE Alu -13 299 93 879 311 188 29 chr10 63885959 63886033 -76430732 + L2 LINE L2 2067 2128 -1186 4801 158 98 42 chr10 63886033 63886998 -76429767 - LTR28 LTR ERV1 0 1020 1 879 311 188 29 chr10 63886998 63887707 -76429058 + L2 LINE L2 2128 2974 -340 910 200 0 0 chr10 63887812 63887972 -76428793 + AluJb SINE Alu 140 299 -13 1154 96 169 11 chr10 63888102 63888280 -76428485 - AluSx SINE Alu -105 207 2 1235 77 0 0 chr10 63888414 63888569 -76428196 - AluY SINE Alu -6 305 151 1424 181 45 21 chr10 63888644 63888780 -76427985 + AluJo SINE Alu 1 132 -180 1741 201 0 3 chr10 63888780 63889074 -76427691 + AluJb SINE Alu 2 294 -18 1802 124 31 8 chr10 63889079 63889338 -76427427 + AluSx SINE Alu 1 265 -47 1424 181 45 21 chr10 63889338 63889482 -76427283 + AluJo SINE Alu 135 294 -18 2213 130 0 0 chr10 63889485 63889784 -76426981 - AluSx SINE Alu -13 299 1 24 32 0 0 chr10 63889788 63889819 -76426946 + AT_rich Low_complexity Low_complexity 1 31 0 1937 119 7 0 chr10 63889820 63890097 -76426668 - MER61C LTR ERV1 -155 279 1 1867 158 17 0 chr10 63890139 63890430 -76426335 + AluJb SINE Alu 1 296 -16 446 284 35 12 chr10 63891755 63891924 -76424841 - L2 LINE L2 -775 2539 2367 1816 164 13 10 chr10 63892089 63892399 -76424366 - AluSx SINE Alu -1 311 1 2171 124 7 0 chr10 63892574 63892880 -76423885 + AluSq SINE Alu 1 308 -5 1594 191 17 13 chr10 63893042 63893177 -76423588 + AluJo SINE Alu 1 134 -178 2330 89 7 3 chr10 63893177 63893479 -76423286 + AluSp SINE Alu 1 303 -10 1594 191 17 13 chr10 63893479 63893641 -76423124 + AluJo SINE Alu 134 299 -13 250 143 0 0 chr10 63893757 63893799 -76422966 + Looper DNA T2_type 23 64 -1494 447 99 12 25 chr10 63893799 63893880 -76422885 - Alu SINE Alu -1 309 230 23 0 0 0 chr10 63893931 63893954 -76422811 + AT_rich Low_complexity Low_complexity 1 23 0 234 180 33 16 chr10 63893968 63894029 -76422736 + L1MCa LINE L1 2007 2068 -4358 608 217 8 0 chr10 63894047 63894167 -76422598 - FLAM_C SINE Alu -21 122 2 1303 219 54 3 chr10 63894177 63894528 -76422237 + Looper DNA T2_type 149 517 -1041 1670 102 94 62 chr10 63894568 63894843 -76421922 - AluSg SINE Alu -26 284 1 1336 184 111 58 chr10 63895080 63895439 -76421326 + Cheshire DNA MER1_type 1 378 -2042 1101 175 0 0 chr10 63895448 63895631 -76421134 - AluSg/x SINE Alu 0 310 128 484 170 132 0 chr10 63895634 63895740 -76421025 + Cheshire DNA MER1_type 392 511 -1909 270 0 0 0 chr10 63895769 63895799 -76420966 + (TA)n Simple_repeat Simple_repeat 2 31 0 1877 153 24 0 chr10 63895799 63896094 -76420671 - AluJb SINE Alu -8 304 3 742 210 72 116 chr10 63896113 63896261 -76420504 + L1MA9 LINE L1 5937 6090 -222 2279 100 3 0 chr10 63896261 63896560 -76420205 - AluSp SINE Alu -13 300 1 742 210 72 116 chr10 63896560 63896773 -76419992 + L1MA9 LINE L1 6090 6282 -30 1370 157 39 18 chr10 63896778 63896791 -76419974 + Cheshire DNA MER1_type 2008 2019 -401 2016 73 0 8 chr10 63896791 63897077 -76419688 + AluY SINE Alu 36 319 0 1370 157 39 18 chr10 63897077 63897342 -76419423 + Cheshire DNA MER1_type 2019 2293 -127 895 184 5 65 chr10 63897348 63897549 -76419216 + AluJb SINE Alu 87 275 -37 241 26 53 0 chr10 63897562 63897600 -76419165 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 635 192 16 0 chr10 63897601 63897726 -76419039 + Cheshire DNA MER1_type 2294 2420 0 222 401 32 16 chr10 63897783 63898092 -76418673 - L2 LINE L2 -826 2488 2175 2068 103 0 4 chr10 63898350 63898622 -76418143 - AluSg SINE Alu -39 271 1 231 154 19 0 chr10 63898664 63898716 -76418049 - L1M4 LINE L1 -1682 4464 4412 412 57 57 0 chr10 63898716 63898769 -76417996 + U6 snRNA snRNA 1 56 -51 386 189 92 30 chr10 63898776 63898940 -76417825 - L1M4 LINE L1 -1709 4437 4264 2346 99 0 3 chr10 63898941 63899243 -76417522 - AluSq SINE Alu -12 301 1 2416 98 0 0 chr10 63899246 63899553 -76417212 - AluSx SINE Alu -5 307 1 724 168 0 56 chr10 63899555 63899698 -76417067 - FLAM_C SINE Alu -3 140 6 2288 80 0 13 chr10 63899733 63900032 -76416733 - AluSc SINE Alu -14 295 1 1266 221 47 7 chr10 63900033 63900331 -76416434 - L1MDa LINE L1 -6183 357 48 1600 154 32 14 chr10 63900441 63900749 -76416016 - AluJb SINE Alu 0 313 1 2757 239 149 46 chr10 63900750 63901035 -76415730 - L1MEc LINE L1 -5051 1345 1091 848 188 0 0 chr10 63901035 63901168 -76415597 - FLAM_C SINE Alu 0 133 1 2757 239 149 46 chr10 63901168 63901513 -76415252 - L1MEc LINE L1 -5305 1091 783 9142 62 19 133 chr10 63901513 63903101 -76413664 - SVA Other Other 0 1386 8 2757 239 149 46 chr10 63903101 63903129 -76413636 - L1MEc LINE L1 -5613 783 759 2436 98 3 0 chr10 63903129 63903436 -76413329 - AluSx SINE Alu -4 308 1 2757 239 149 46 chr10 63903436 63903879 -76412886 - L1MEc LINE L1 -5637 759 128 2541 69 0 0 chr10 63903880 63904183 -76412582 - AluY SINE Alu -8 303 1 396 159 0 0 chr10 63904345 63904408 -76412357 + Tigger2 DNA MER2_type 1 63 -2655 2093 147 0 3 chr10 63904428 63904741 -76412024 + AluSx SINE Alu 1 312 0 975 173 12 0 chr10 63904743 63904911 -76411854 + AluJo/FRAM SINE Alu 136 305 -7 2089 116 3 3 chr10 63904911 63905205 -76411560 + AluSx SINE Alu 1 294 -18 2217 100 3 7 chr10 63905573 63905873 -76410892 - AluSx SINE Alu -13 299 1 760 184 19 63 chr10 63905917 63905944 -76410821 + Charlie5 DNA MER1_type 2234 2261 -363 2171 107 0 13 chr10 63905944 63906242 -76410523 - AluSp SINE Alu -19 294 1 2156 107 13 3 chr10 63906244 63906544 -76410221 - AluSx SINE Alu -9 303 1 760 184 19 63 chr10 63906544 63906720 -76410045 + Charlie5 DNA MER1_type 2262 2431 -193 2193 87 7 0 chr10 63906826 63907130 -76409635 - AluSp SINE Alu 0 316 11 2187 103 3 0 chr10 63907157 63907439 -76409326 - AluSq SINE Alu -30 283 1 2391 79 3 0 chr10 63907467 63907759 -76409006 - AluSp SINE Alu -20 293 1 464 135 62 0 chr10 63907930 63908026 -76408739 - Tigger6a DNA MER2_type -638 445 344 1516 213 38 35 chr10 63908055 63908297 -76408468 + LTR52 LTR ERVL 6 251 -170 1122 143 209 39 chr10 63908297 63908555 -76408210 - AluJb SINE Alu 0 302 1 1516 213 38 35 chr10 63908555 63908707 -76408058 + LTR52 LTR ERVL 251 401 -20 560 135 84 3 chr10 63908715 63908822 -76407943 - MER67B LTR ERV1 0 614 405 2710 137 38 87 chr10 63908888 63909465 -76407300 - MER67B LTR ERV1 -112 549 1 1704 179 62 0 chr10 63909482 63909790 -76406975 - Tigger6a DNA MER2_type -756 327 1 30 27 0 0 chr10 63909819 63909856 -76406909 + AT_rich Low_complexity Low_complexity 1 37 0 2027 121 6 29 chr10 63909931 63910245 -76406520 - AluSx SINE Alu -5 307 1 625 73 0 0 chr10 63910770 63910852 -76405913 + AluJ/FRAM SINE Alu 221 302 -10 2259 60 7 10 chr10 63910906 63911205 -76405560 - AluY SINE Alu -13 298 1 2299 97 0 0 chr10 63912477 63912775 -76403990 - AluSx SINE Alu -14 298 1 853 104 0 0 chr10 63913025 63913140 -76403625 + AluSg/x SINE Alu 166 280 -30 188 0 74 0 chr10 63913143 63913170 -76403595 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2282 92 3 13 chr10 63913176 63913482 -76403283 + AluSg SINE Alu 7 309 -1 732 88 9 18 chr10 63913490 63913603 -76403162 + AluSg/x SINE Alu 188 299 -13 2439 56 0 0 chr10 63913636 63913961 -76402804 + AluY SINE Alu 2 326 0 323 91 0 0 chr10 63913963 63914007 -76402758 + U7 snRNA snRNA 5 48 -15 1613 118 22 89 chr10 63914012 63914327 -76402438 - MER4A LTR ERV1 0 664 371 612 135 34 81 chr10 63914327 63914475 -76402290 - MER4A LTR ERV1 -522 142 2 222 37 0 0 chr10 63915116 63915143 -76401622 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1995 134 0 0 chr10 63915149 63915424 -76401341 - AluSx SINE Alu -37 275 1 848 196 128 0 chr10 63915479 63915658 -76401107 - AluJb SINE Alu -25 287 86 2408 66 0 3 chr10 63915663 63915984 -76400781 - AluY SINE Alu 0 320 1 304 256 85 88 chr10 63916121 63916255 -76400510 - L1M4 LINE L1 -2299 3847 3714 2108 123 33 3 chr10 63916255 63916557 -76400208 - AluSq SINE Alu -2 311 1 304 256 85 88 chr10 63916557 63916580 -76400185 - L1M4 LINE L1 -2432 3714 3692 1935 149 3 7 chr10 63916580 63916876 -76399889 - AluSx SINE Alu -17 295 1 304 256 85 88 chr10 63916876 63916892 -76399873 - L1M4 LINE L1 -2454 3692 3677 2322 108 0 0 chr10 63916892 63917189 -76399576 - AluSq SINE Alu -16 297 1 1945 159 0 13 chr10 63917194 63917503 -76399262 - AluJo SINE Alu -7 305 1 304 256 85 88 chr10 63917503 63917696 -76399069 - L1M4 LINE L1 -2473 3673 3474 604 155 0 0 chr10 63918030 63918127 -76398638 - AluSg/x SINE Alu -9 303 207 468 152 0 189 chr10 63918204 63918336 -76398429 + Tigger1 DNA MER2_type 1 107 -2311 708 93 9 19 chr10 63918340 63918448 -76398317 - AluSc SINE Alu -13 296 190 4663 73 19 9 chr10 63918623 63919726 -76397039 - MER11A LTR ERVK -12 1254 1 407 59 35 47 chr10 63919726 63919811 -76396954 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 668 222 15 89 chr10 63919821 63919980 -76396785 + MLT1B LTR MaLR 203 348 -42 1956 146 0 0 chr10 63919980 63920293 -76396472 - AluSx SINE Alu 0 313 1 668 222 15 89 chr10 63920293 63920334 -76396431 + MLT1B LTR MaLR 348 390 0 3143 206 45 0 chr10 63920334 63920976 -76395789 + MLT1B-int LTR MaLR 1 671 -700 19045 53 1 14 chr10 63921253 63923670 -76393095 + L1PA6 LINE L1 2939 5348 -806 2089 83 62 24 chr10 63923670 63923958 -76392807 + AluY SINE Alu 3 301 -10 19045 53 1 14 chr10 63923958 63924754 -76392011 + L1PA6 LINE L1 5348 6153 -1 377 183 103 48 chr10 63924830 63924935 -76391830 - AluJ/FLAM SINE Alu -207 95 3 2533 63 0 7 chr10 63925656 63925959 -76390806 - AluY SINE Alu -10 301 1 318 228 0 0 chr10 63926045 63926102 -76390663 + MER58 DNA MER1_type 1 57 -329 195 42 0 0 chr10 63926166 63926190 -76390575 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2150 128 7 0 chr10 63929161 63929466 -76387299 - AluSq SINE Alu -2 311 5 998 130 0 0 chr10 63929556 63929687 -76387078 - AluSq/x SINE Alu -181 131 1 237 145 48 0 chr10 63930031 63930093 -76386672 + (TA)n Simple_repeat Simple_repeat 1 65 0 2751 233 33 6 chr10 63930200 63930834 -76385931 - MER82 DNA MER2_type 0 653 3 189 259 0 0 chr10 63931920 63931974 -76384791 - MIR SINE MIR -30 232 179 2100 132 3 0 chr10 63932157 63932452 -76384313 + AluSg SINE Alu 1 296 -14 675 190 0 0 chr10 63932716 63932832 -76383933 + FLAM_A SINE Alu 10 125 -17 5146 187 120 10 chr10 63933474 63934502 -76382263 - HERVL74 LTR ERVL -2444 3241 2101 1475 177 20 0 chr10 63934665 63934913 -76381852 - HERVL74 LTR ERVL -3587 2098 1846 3017 68 35 55 chr10 63934913 63935366 -76381399 + MLT2A1 LTR ERVL 1 444 0 44675 67 14 12 chr10 63935366 63935713 -76381052 + HERVL-A1 LTR ERVL 1 346 -5308 2066 93 17 33 chr10 63935713 63936013 -76380752 + AluSc SINE Alu 1 295 -14 44675 67 14 12 chr10 63936013 63937358 -76379407 + HERVL-A1 LTR ERVL 346 1687 -3967 2151 124 0 13 chr10 63937358 63937665 -76379100 + AluSx SINE Alu 7 309 -3 44675 67 14 12 chr10 63937665 63940948 -76375817 + HERVL-A1 LTR ERVL 1687 4992 -662 2492 83 0 0 chr10 63940948 63941249 -76375516 + AluSg SINE Alu 1 301 -9 44675 67 14 12 chr10 63941249 63941914 -76374851 + HERVL-A1 LTR ERVL 4992 5654 0 2985 85 41 23 chr10 63941914 63942311 -76374454 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr10 63942311 63942335 -76374430 + (TA)n Simple_repeat Simple_repeat 2 25 0 2985 85 41 23 chr10 63942335 63942373 -76374392 + MLT2A1 LTR ERVL 408 444 0 2042 172 133 47 chr10 63942373 63942584 -76374181 - HERVL74 LTR ERVL -3835 1850 1659 1723 165 49 0 chr10 63942584 63942869 -76373896 - AluSx SINE Alu -13 299 1 2042 172 133 47 chr10 63942869 63942917 -76373848 - HERVL74 LTR ERVL -4026 1659 1617 1952 90 0 115 chr10 63942917 63943267 -76373498 - AluSq SINE Alu 0 313 1 2042 172 133 47 chr10 63943267 63943493 -76373272 - HERVL74 LTR ERVL -4068 1617 1321 899 194 5 48 chr10 63943497 63943683 -76373082 - HERVL74 LTR ERVL -2603 953 776 307 274 0 0 chr10 63943746 63943819 -76372946 + tRNA-Met-i tRNA tRNA 1 73 -2 1850 199 47 35 chr10 63944926 63945262 -76371503 - LTR53 LTR ERVL -11 508 163 1734 154 37 0 chr10 63945262 63945562 -76371203 - AluJo SINE Alu 0 310 1 1850 199 47 35 chr10 63945562 63945652 -76371113 - LTR53 LTR ERVL -356 163 76 649 192 218 118 chr10 63945666 63945851 -76370914 + L1M4c LINE L1 1714 1879 -4505 2200 134 3 0 chr10 63945851 63946157 -76370608 + AluSq SINE Alu 1 307 -6 649 192 218 118 chr10 63946157 63946211 -76370554 + L1M4c LINE L1 1879 1926 -4458 2321 108 0 0 chr10 63946211 63946506 -76370259 + AluSg SINE Alu 1 295 -15 649 192 218 118 chr10 63946506 63946610 -76370155 + L1M4c LINE L1 1926 2018 -4366 1067 175 0 0 chr10 63946610 63946776 -76369989 + FAM SINE Alu 1 166 -9 649 192 218 118 chr10 63946776 63946788 -76369977 + L1M4c LINE L1 2018 2027 -4357 1887 121 46 3 chr10 63946788 63947070 -76369695 + AluSq SINE Alu 1 294 -19 649 192 218 118 chr10 63947070 63947200 -76369565 + L1M4c LINE L1 2027 2143 -4241 2343 99 0 10 chr10 63947200 63947512 -76369253 + AluSg SINE Alu 2 310 0 649 192 218 118 chr10 63947512 63947638 -76369127 + L1M4c LINE L1 2143 2390 -3994 5549 118 119 21 chr10 63947638 63947892 -76368873 - Tigger3b DNA MER2_type -1797 1231 1003 2032 141 0 7 chr10 63947892 63948198 -76368567 + AluJb SINE Alu 7 310 -2 5549 118 119 21 chr10 63948198 63948745 -76368020 - Tigger3b DNA MER2_type -2025 1003 310 1969 160 10 0 chr10 63948745 63949045 -76367720 - AluJb SINE Alu -9 303 1 5549 118 119 21 chr10 63949045 63949243 -76367522 - Tigger3b DNA MER2_type -2718 310 133 4799 39 18 0 chr10 63949258 63949825 -76366940 - L1PA5 LINE L1 0 6154 5578 405 163 22 0 chr10 63949834 63949926 -76366839 - L1M4 LINE L1 -1658 4488 4395 410 262 0 0 chr10 63949926 63950010 -76366755 + AluJ/FRAM SINE Alu 219 302 0 * 2941 131 54 28 chr10 63950007 63950028 -76366737 + Tigger3(Golem) DNA MER2_type 2480 2499 -529 2253 127 0 7 chr10 63950028 63950336 -76366429 - AluSx SINE Alu -6 306 1 2941 131 54 28 chr10 63950336 63950849 -76365916 + Tigger3(Golem) DNA MER2_type 2499 3028 0 1731 166 3 33 chr10 63950984 63951291 -76365474 + AluJb SINE Alu 1 298 -14 713 142 0 0 chr10 63951346 63951452 -76365313 - FRAM SINE Alu -9 167 62 935 143 8 0 chr10 63951483 63951616 -76365149 + AluJo SINE Alu 1 134 -178 2150 88 40 0 chr10 63951618 63951916 -76364849 + AluSx SINE Alu 1 309 0 1294 211 4 0 chr10 63952017 63952254 -76364511 - AluJb SINE Alu -5 307 70 761 187 0 0 chr10 63952254 63952388 -76364377 + AluJb SINE Alu 179 312 0 2384 58 0 0 chr10 63952835 63953111 -76363654 - AluY SINE Alu -14 297 22 35 0 0 0 chr10 63953211 63953246 -76363519 + GC_rich Low_complexity Low_complexity 1 35 0 2044 86 55 21 chr10 63953532 63953823 -76362942 + AluSg SINE Alu 1 301 -9 2105 141 3 3 chr10 63953880 63954193 -76362572 + AluSp SINE Alu 1 313 0 511 202 48 0 chr10 63954193 63954297 -76362468 + L1M LINE L1 5319 5427 -743 232 191 21 0 chr10 63954293 63954340 -76362425 + L1P LINE L1 3628 3675 -2471 * 4632 220 63 58 chr10 63954433 63954495 -76362270 + L1MD1 LINE L1 3697 3757 -2485 2308 102 3 0 chr10 63954495 63954790 -76361975 + AluSp SINE Alu 1 296 -17 4632 220 63 58 chr10 63954790 63956177 -76360588 + L1MD1 LINE L1 3757 5136 -1106 1648 91 4 83 chr10 63956177 63956441 -76360324 + AluSx SINE Alu 42 284 -28 4632 220 63 58 chr10 63956441 63956739 -76360026 + L1MD1 LINE L1 5136 5431 -811 2405 109 0 0 chr10 63956739 63957050 -76359715 + AluSx SINE Alu 1 311 -1 4632 220 63 58 chr10 63957050 63957662 -76359103 + L1MD1 LINE L1 5431 6075 -167 942 204 117 0 chr10 63957664 63957860 -76358905 + MER58A DNA MER1_type 6 224 0 318 241 9 46 chr10 63957867 63957975 -76358790 + L1ME1 LINE L1 6058 6161 -5 1781 137 53 47 chr10 63958306 63958436 -76358329 + AluSx SINE Alu 1 129 -183 2161 120 10 0 chr10 63958436 63958735 -76358030 - AluSg SINE Alu -8 302 1 1781 137 53 47 chr10 63958735 63958904 -76357861 + AluSx SINE Alu 129 302 -10 1727 167 24 7 chr10 63958913 63959207 -76357558 + AluJb SINE Alu 1 299 -13 2312 78 0 3 chr10 63959450 63959732 -76357033 - AluY SINE Alu -30 281 1 529 217 96 0 chr10 63959932 63960047 -76356718 + FLAM_C SINE Alu 1 126 -7 25 0 0 0 chr10 63960047 63960072 -76356693 + AT_rich Low_complexity Low_complexity 1 25 0 895 176 33 0 chr10 63960632 63960785 -76355980 - FRAM SINE Alu -18 158 1 2091 103 14 0 chr10 63961025 63961350 -76355415 - AluSq SINE Alu 0 329 1 5393 93 60 41 chr10 63961369 63962207 -76354558 - SVA Other Other -2 1384 531 2362 103 0 0 chr10 63962426 63962736 -76354029 + AluY SINE Alu 1 310 -1 1253 118 0 0 chr10 63962737 63962906 -76353859 + AluSg/x SINE Alu 129 297 -12 1630 152 47 37 chr10 63963005 63963301 -76353464 + AluJo SINE Alu 6 304 -8 2080 129 3 0 chr10 63963664 63963959 -76352806 - AluSx SINE Alu -16 296 1 2031 119 0 51 chr10 63964224 63964535 -76352230 + AluSx SINE Alu 1 295 -17 1484 152 0 0 chr10 63964641 63964852 -76351913 + AluSx SINE Alu 1 211 -101 296 161 18 0 chr10 63964856 63964912 -76351853 - FAM SINE Alu -84 91 35 2327 148 28 26 chr10 63964961 63965386 -76351379 - MSTB LTR MaLR 0 426 1 524 200 72 123 chr10 63965760 63965955 -76350810 + MLT1A2 LTR MaLR 1 185 -189 1732 169 11 0 chr10 63965995 63966268 -76350497 + AluSx SINE Alu 1 276 -36 354 77 0 0 chr10 63966268 63966320 -76350445 - Alu SINE Alu 0 301 250 336 143 18 0 chr10 63966461 63966517 -76350248 - AluS SINE Alu -245 57 1 * 3990 103 22 8 chr10 63966517 63966549 -76350216 + Tigger1 DNA MER2_type 1448 1478 -940 2303 123 0 0 chr10 63966549 63966858 -76349907 + AluSx SINE Alu 1 309 -3 3990 103 22 8 chr10 63966858 63967412 -76349353 + Tigger1 DNA MER2_type 1478 2042 -376 2358 99 3 0 chr10 63967412 63967715 -76349050 + AluSp SINE Alu 1 304 -9 2351 68 0 3 chr10 63967717 63968010 -76348755 + AluY SINE Alu 1 292 -19 466 236 90 11 chr10 63968017 63968195 -76348570 + MER90 LTR ERV1 370 561 -53 1433 164 18 82 chr10 63968387 63968566 -76348199 - AluJo SINE Alu -4 308 158 2198 113 0 3 chr10 63968566 63968868 -76347897 - AluSg SINE Alu -9 301 1 1433 164 18 82 chr10 63968868 63969017 -76347748 - AluJo SINE Alu -154 158 1 1972 149 0 0 chr10 63969027 63969323 -76347442 - AluSx SINE Alu -7 305 10 1080 90 0 0 chr10 63969334 63969467 -76347298 - AluSq/x SINE Alu -180 133 1 313 75 0 0 chr10 63969467 63969507 -76347258 + MSTA LTR MaLR 389 428 0 605 244 6 54 chr10 63969507 63969675 -76347090 - L1ME3 LINE L1 -55 6107 5948 970 166 106 4 chr10 63969812 63970047 -76346718 + Charlie5 DNA MER1_type 2316 2574 -38 2195 118 3 0 chr10 63970047 63970343 -76346422 - AluSx SINE Alu -15 297 1 925 150 0 0 chr10 63970848 63970975 -76345790 - FLAM_C SINE Alu -16 127 1 36 0 0 0 chr10 63970985 63971021 -76345744 + AT_rich Low_complexity Low_complexity 1 36 0 1173 172 5 20 chr10 63971021 63971225 -76345540 - AluJb SINE Alu -26 286 86 518 31 0 0 chr10 63971245 63971309 -76345456 - AluSp/q SINE Alu -18 295 232 1515 107 0 0 chr10 63971309 63971506 -76345259 - AluSg1 SINE Alu -112 197 1 711 221 0 0 chr10 63971511 63971638 -76345127 - FLAM_A SINE Alu -6 127 1 1233 176 44 88 chr10 63971649 63971967 -76344798 - AluJo SINE Alu -8 304 1 2430 84 0 7 chr10 63971969 63972268 -76344497 - AluY SINE Alu -14 297 1 361 135 40 0 chr10 63972286 63972360 -76344405 + GA-rich Low_complexity Low_complexity 3 79 0 1878 140 0 0 chr10 63972391 63972656 -76344109 + AluSx SINE Alu 11 275 -37 342 217 19 9 chr10 63972663 63972769 -76343996 + GA-rich Low_complexity Low_complexity 2 108 0 418 116 29 0 chr10 63972771 63972840 -76343925 - MER11A LTR ERVK 0 1266 1196 22199 118 13 14 chr10 63972996 63976395 -76340370 - L1P LINE L1 -2739 3407 12 201 74 0 0 chr10 63976573 63976600 -76340165 + (A)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 63976600 63976621 -76340144 + AT_rich Low_complexity Low_complexity 1 21 0 812 80 0 18 chr10 63976647 63976759 -76340006 + AluSg/x SINE Alu 198 307 -2 35 0 0 0 chr10 63976760 63976795 -76339970 + AT_rich Low_complexity Low_complexity 1 35 0 195 42 0 0 chr10 63976867 63976891 -76339874 + (TA)n Simple_repeat Simple_repeat 2 25 0 2540 57 0 0 chr10 63976892 63977189 -76339576 - AluY SINE Alu -14 297 1 474 280 100 35 chr10 63977216 63977477 -76339288 + L2 LINE L2 2475 2752 -562 636 185 15 95 chr10 63977940 63977963 -76338802 + MLT1A1 LTR MaLR 132 155 -210 472 62 0 62 chr10 63977963 63978044 -76338721 + L1PA13 LINE L1 6086 6161 -2 636 185 15 95 chr10 63978044 63978220 -76338545 + MLT1A1 LTR MaLR 155 315 -50 23 54 0 0 chr10 63978223 63978260 -76338505 + AT_rich Low_complexity Low_complexity 1 37 0 1917 153 0 0 chr10 63979331 63979613 -76337152 + AluSx SINE Alu 1 282 -30 360 202 87 19 chr10 63979724 63979828 -76336937 + Looper DNA T2_type 419 529 -1029 1861 124 3 31 chr10 63979856 63980147 -76336618 - AluSx SINE Alu -26 286 4 998 94 18 12 chr10 63980148 63980319 -76336446 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 2166 103 0 0 chr10 63980319 63980600 -76336165 - AluSg SINE Alu -29 281 1 2341 109 0 0 chr10 63980602 63980906 -76335859 - AluSx SINE Alu -4 308 5 1019 150 97 13 chr10 63980921 63981147 -76335618 + Looper DNA T2_type 504 748 -810 1534 124 3 170 chr10 63981184 63981548 -76335217 + AluJb SINE Alu 1 303 -9 2225 102 30 0 chr10 63983422 63983726 -76333039 - AluSp SINE Alu 0 313 1 2064 153 0 0 chr10 63983727 63984022 -76332743 - AluSx SINE Alu -17 295 1 1912 141 3 52 chr10 63984034 63984360 -76332405 - AluSg SINE Alu 0 310 1 942 136 70 47 chr10 63984360 63984537 -76332228 + Tigger1 DNA MER2_type 1248 1432 -986 1978 128 10 24 chr10 63984537 63984834 -76331931 - AluSq SINE Alu -20 293 1 942 136 70 47 chr10 63984834 63984869 -76331896 + Tigger1 DNA MER2_type 1432 1465 -953 372 171 0 0 chr10 63984862 63984938 -76331827 - AluS SINE Alu 0 301 226 * 1600 112 14 5 chr10 63985041 63985264 -76331501 + AluSg/x SINE Alu 67 291 -19 529 210 161 0 chr10 63986306 63986449 -76330316 - MER3 DNA MER1_type -11 198 33 2396 71 3 7 chr10 63986893 63987188 -76329577 + AluSp SINE Alu 3 296 -17 343 324 108 22 chr10 63987209 63987394 -76329371 + L1 LINE L1 2271 2471 -3675 289 335 103 0 chr10 63987558 63987713 -76329052 - MIR SINE MIR 0 262 92 2229 123 0 0 chr10 63987785 63988087 -76328678 - AluY SINE Alu -9 302 1 2121 121 0 7 chr10 63988095 63988400 -76328365 - AluSq SINE Alu -10 303 1 1908 105 16 70 chr10 63988451 63988764 -76328001 + AluSx SINE Alu 1 296 -16 362 288 107 91 chr10 63988831 63989306 -76327459 + L1 LINE L1 2894 3376 -2770 229 267 248 10 chr10 63989319 63989420 -76327345 + L2 LINE L2 3187 3311 -2 1460 181 80 21 chr10 63989483 63989771 -76326994 + AluJb SINE Alu 1 305 -7 489 167 0 31 chr10 63989862 63989958 -76326807 + FLAM_C SINE Alu 46 138 -5 2265 109 0 7 chr10 63990159 63990324 -76326441 - AluSg SINE Alu -10 300 136 2417 65 0 36 chr10 63990324 63990633 -76326132 - AluY SINE Alu -13 298 1 2265 109 0 7 chr10 63990633 63990769 -76325996 - AluSg SINE Alu -174 136 1 2130 92 19 25 chr10 63990772 63991087 -76325678 - AluSq SINE Alu 0 313 1 2124 121 24 0 chr10 63991095 63991385 -76325380 - AluSq SINE Alu -16 297 1 1714 207 26 5 chr10 63991388 63991765 -76325000 + MLT1A2-int LTR MaLR 1351 1735 0 1141 216 21 90 chr10 63991777 63992166 -76324599 + MLT1A2 LTR MaLR 13 374 0 533 305 102 54 chr10 63992280 63992722 -76324043 - L1MEc LINE L1 -5844 552 90 782 142 0 75 chr10 63992914 63993048 -76323717 - FLAM_C SINE Alu -18 125 2 1835 130 173 14 chr10 63993090 63993459 -76323306 - MSTA LTR MaLR 0 428 1 22 35 0 0 chr10 63993526 63993555 -76323210 + AT_rich Low_complexity Low_complexity 1 29 0 805 151 8 0 chr10 63993792 63993918 -76322847 + AluJb SINE Alu 169 295 -17 2273 65 20 3 chr10 63994265 63994559 -76322206 - AluSc SINE Alu -10 299 1 1048 140 6 0 chr10 63994572 63994736 -76322029 - AluJb SINE Alu -11 301 137 251 175 0 32 chr10 63994871 63994934 -76321831 + C-rich Low_complexity Low_complexity 1 61 0 1358 122 45 32 chr10 63996100 63996347 -76320418 + AluJb SINE Alu 40 289 -23 975 218 114 20 chr10 64097288 64097586 -76219179 - LTR48B LTR ERV1 -318 326 1 1234 125 22 0 chr10 64097612 64097796 -76218969 + AluSp SINE Alu 123 310 -3 500 117 0 0 chr10 64098470 64098547 -76218218 - L1M4 LINE L1 -501 5683 5607 202 297 81 0 chr10 64099248 64099322 -76217443 - MIR SINE MIR -117 145 66 3233 89 19 19 chr10 64099973 64100500 -76216265 + L1P5 LINE L1 5265 5791 -360 273 196 0 0 chr10 64100516 64100572 -76216193 + (TATG)n Simple_repeat Simple_repeat 2 57 0 337 75 0 0 chr10 64100573 64100626 -76216139 + L1PB1 LINE L1 6098 6150 -1 251 267 69 9 chr10 64102857 64102973 -76213792 + Charlie7 DNA MER1_type 44 166 -2446 344 216 108 18 chr10 64104981 64105092 -76211673 + MIR SINE MIR 33 153 -109 1018 123 0 0 chr10 64106326 64106481 -76210284 - L1PA13 LINE L1 -15 6148 5994 252 220 0 0 chr10 64107228 64107287 -76209478 + FAM SINE Alu 115 173 -6 21 71 0 0 chr10 64107486 64107528 -76209237 + AT_rich Low_complexity Low_complexity 1 42 0 1942 155 7 0 chr10 64107528 64107818 -76208947 - AluJb SINE Alu -20 292 1 332 312 48 42 chr10 64110265 64110454 -76206311 - L1MEc LINE L1 -6100 296 107 516 247 55 7 chr10 64110484 64110630 -76206135 + L1M4b LINE L1 2 154 -6705 3862 119 29 5 chr10 64110634 64111258 -76205507 - L1MA2 LINE L1 0 6304 5666 421 138 11 23 chr10 64111449 64111536 -76205229 + MSTA LTR MaLR 343 428 0 * 516 217 0 35 chr10 64111536 64111647 -76205118 - Tigger3(Golem) DNA MER2_type -2922 107 1 214 229 57 57 chr10 64111647 64111717 -76205048 - L2 LINE L2 -36 3277 3208 195 337 86 69 chr10 64111934 64112109 -76204656 + MIR3 SINE MIR 30 207 -1 295 231 56 74 chr10 64112306 64112414 -76204351 + L2 LINE L2 3205 3310 -3 1431 188 38 17 chr10 64112594 64112940 -76203825 - L1MB1 LINE L1 -16 6152 5800 2288 110 3 0 chr10 64113112 64113413 -76203352 + AluSp SINE Alu 5 306 -7 3996 221 8 9 chr10 64113426 64114295 -76202470 + L1PA14 LINE L1 233 1100 -5687 261 211 19 19 chr10 64114611 64114715 -76202050 + GA-rich Low_complexity Low_complexity 3 106 0 4978 166 22 4 chr10 64114941 64116343 -76200422 + L1PA14 LINE L1 5257 6684 -128 3766 219 4 24 chr10 64116457 64117481 -76199284 - L1 LINE L1 -2029 4117 3115 305 257 198 0 chr10 64118127 64118228 -76198537 + L1ME4a LINE L1 5378 5498 -623 357 260 144 24 chr10 64118434 64118726 -76198039 + L1ME4a LINE L1 5607 5933 -188 1156 211 18 11 chr10 64118735 64119019 -76197746 - L1 LINE L1 -1838 4308 4023 1093 136 0 0 chr10 64119056 64119210 -76197555 - FRAM SINE Alu -9 167 14 3026 212 50 31 chr10 64119217 64119408 -76197357 + L1M3 LINE L1 4330 4516 -1664 234 0 0 0 chr10 64119408 64119434 -76197331 + (TG)n Simple_repeat Simple_repeat 2 27 0 1537 179 4 15 chr10 64119436 64119704 -76197061 - AluJo SINE Alu -25 287 23 3026 212 50 31 chr10 64119704 64120670 -76196095 + L1M3 LINE L1 4516 5517 -663 704 296 86 93 chr10 64120792 64121295 -76195470 + L1MEd LINE L1 512 1012 -5107 2137 145 0 0 chr10 64121295 64121599 -76195166 + AluSx SINE Alu 1 304 -8 704 296 86 93 chr10 64121599 64121653 -76195112 + L1MEd LINE L1 1012 1065 -5054 800 214 60 25 chr10 64121669 64121870 -76194895 - MER8 DNA MER2_type 0 239 32 213 258 55 62 chr10 64121910 64122038 -76194727 - L2 LINE L2 -69 3244 3118 196 269 19 0 chr10 64122132 64122184 -76194581 - L2 LINE L2 -341 2972 2920 2070 104 42 0 chr10 64122458 64122745 -76194020 - AluSx SINE Alu -13 299 1 2285 110 0 0 chr10 64122778 64123078 -76193687 - AluSc SINE Alu -9 300 1 30 0 0 0 chr10 64123622 64123652 -76193113 + AT_rich Low_complexity Low_complexity 1 30 0 1582 206 0 25 chr10 64123672 64123988 -76192777 + AluJb SINE Alu 1 308 -4 977 195 37 86 chr10 64124099 64124448 -76192317 - L1MD2 LINE L1 -1 6358 6027 317 258 67 0 chr10 64125819 64125908 -76190857 + MIR SINE MIR 86 180 -82 1449 124 31 0 chr10 64125980 64126206 -76190559 - AluSc SINE Alu -19 290 58 458 167 200 0 chr10 64127031 64127121 -76189644 + FLAM_A SINE Alu 9 116 -26 612 191 0 44 chr10 64128636 64128772 -76187993 + FLAM_A SINE Alu 4 133 0 740 197 15 0 chr10 64128846 64128978 -76187787 + FRAM SINE Alu 26 159 -17 1113 141 0 0 chr10 64129392 64129555 -76187210 - AluSg/x SINE Alu -13 299 137 24 67 0 0 chr10 64129661 64129706 -76187059 + AT_rich Low_complexity Low_complexity 1 45 0 2129 128 0 0 chr10 64129747 64130036 -76186729 + AluSq SINE Alu 1 289 -24 509 109 22 22 chr10 64130264 64130356 -76186409 + Alu SINE Alu 221 312 0 2041 136 0 7 chr10 64130560 64130862 -76185903 + AluSx SINE Alu 1 300 -12 1853 171 0 3 chr10 64131071 64131390 -76185375 - AluJb SINE Alu 0 318 1 308 277 62 9 chr10 64131433 64131545 -76185220 - HAL1 LINE L1 -1643 864 747 2122 136 3 0 chr10 64131859 64132167 -76184598 - AluSx SINE Alu -3 309 1 1432 151 38 75 chr10 64132301 64132463 -76184302 - AluJb SINE Alu -17 295 147 2146 117 0 29 chr10 64132463 64132772 -76183993 - AluSx SINE Alu -10 302 3 1432 151 38 75 chr10 64132772 64132901 -76183864 - AluJb SINE Alu -165 147 15 1707 147 53 4 chr10 64133110 64133376 -76183389 - AluJb SINE Alu -13 299 21 185 281 83 31 chr10 64133554 64133650 -76183115 + L2 LINE L2 2743 2843 -471 590 122 0 0 chr10 64134098 64134180 -76182585 + AluSg1 SINE Alu 1 82 -227 202 386 9 44 chr10 64134259 64134373 -76182392 + MIR3 SINE MIR 54 163 -45 418 243 52 29 chr10 64134451 64134587 -76182178 + MER77 LTR ERV1 59 197 -408 1227 244 73 22 chr10 64134757 64135126 -76181639 + MER77 LTR ERV1 214 601 -4 601 232 46 20 chr10 64135183 64135334 -76181431 + MER21-int LTR ERV1 3073 3227 -3531 * 656 233 34 47 chr10 64135330 64135612 -76181153 + MER21-int LTR ERV1 138 3356 -3402 883 228 90 82 chr10 64135641 64135846 -76180919 + MER21-int LTR ERV1 1219 1430 -2761 2151 127 13 0 chr10 64135846 64136154 -76180611 - AluSp SINE Alu 0 313 2 883 228 90 82 chr10 64136154 64136303 -76180462 + MER21-int LTR ERV1 1430 1576 -2615 843 251 92 55 chr10 64136475 64136830 -76179935 + MER21-int LTR ERV1 1681 4959 -1799 458 238 102 14 chr10 64136837 64136984 -76179781 + MER21-int LTR ERV1 2095 2254 -1937 1590 131 150 0 chr10 64137297 64137557 -76179208 - AluSx SINE Alu -3 299 1 277 176 27 14 chr10 64137700 64137774 -76178991 + CT-rich Low_complexity Low_complexity 4 78 0 1856 126 22 4 chr10 64137783 64138052 -76178713 - AluSx SINE Alu -38 274 1 604 289 101 86 chr10 64138347 64138894 -76177871 + MER77 LTR ERV1 44 598 -7 345 304 190 16 chr10 64138976 64139160 -76177605 - MIR SINE MIR -40 222 7 1764 167 0 14 chr10 64139603 64139891 -76176874 - AluJo SINE Alu -28 284 1 327 183 150 42 chr10 64139983 64140103 -76176662 - L1ME LINE L1 -298 5823 5691 322 318 85 28 chr10 64140214 64140390 -76176375 - L1ME LINE L1 -458 5663 5478 22 0 0 0 chr10 64140776 64140798 -76175967 + AT_rich Low_complexity Low_complexity 1 22 0 430 289 60 54 chr10 64141251 64141417 -76175348 - L2 LINE L2 0 3272 3106 2909 187 54 2 chr10 64142656 64143281 -76173484 + L1MB3 LINE L1 5524 6181 -2 2256 99 0 7 chr10 64143305 64143598 -76173167 + AluSg SINE Alu 1 291 -19 978 171 0 59 chr10 64143599 64143786 -76172979 + AluJo/FRAM SINE Alu 134 309 -3 32 43 0 0 chr10 64143812 64143858 -76172907 + AT_rich Low_complexity Low_complexity 1 46 0 2280 85 0 7 chr10 64144162 64144457 -76172308 + AluSg SINE Alu 1 293 -17 1510 217 3 19 chr10 64145782 64146096 -76170669 - AluJo SINE Alu -3 309 1 1615 101 24 0 chr10 64146388 64146636 -76170129 - L1MA4 LINE L1 -4 6296 6043 2896 140 15 21 chr10 64146642 64147076 -76169689 + L1MA4 LINE L1 5514 5946 -354 1701 147 0 89 chr10 64147076 64147403 -76169362 + AluJo SINE Alu 1 298 -14 2896 140 15 21 chr10 64147403 64147502 -76169263 + L1MA4 LINE L1 5946 6044 -256 2049 118 4 0 chr10 64147782 64148062 -76168703 + AluSq SINE Alu 1 281 -32 450 335 0 13 chr10 64148082 64148237 -76168528 - MER58A DNA MER1_type -32 192 40 976 199 54 4 chr10 64148237 64148498 -76168267 + L1 LINE L1 3818 4091 -2055 1714 177 0 3 chr10 64149289 64149571 -76167194 + AluJb SINE Alu 21 301 -11 5484 153 112 3 chr10 64149571 64150635 -76166130 - Tigger1 DNA MER2_type -167 2251 1072 2913 160 31 31 chr10 64150642 64151247 -76165518 - Tigger1 DNA MER2_type -1743 675 71 1691 167 0 39 chr10 64151274 64151579 -76165186 - AluJo SINE Alu 0 312 20 386 276 90 0 chr10 64151741 64151886 -76164879 + L1ME1 LINE L1 4395 4552 -1594 249 83 0 0 chr10 64151928 64151964 -76164801 + (CA)n Simple_repeat Simple_repeat 2 37 0 9409 199 32 26 chr10 64152008 64153482 -76163283 + L1M1 LINE L1 572 2065 -4784 2514 69 0 0 chr10 64153482 64153787 -76162978 - AluY SINE Alu -6 305 1 9409 199 32 26 chr10 64153787 64154573 -76162192 + L1M1 LINE L1 2065 2845 -4004 9198 191 44 72 chr10 64154588 64154894 -76161871 + L1M1 LINE L1 2886 3199 -3806 2160 117 40 0 chr10 64154894 64155194 -76161571 + AluSx SINE Alu 1 312 0 9198 191 44 72 chr10 64155194 64157080 -76159685 + L1M1 LINE L1 3199 5136 -1869 2339 74 0 0 chr10 64157080 64157397 -76159368 + AluY SINE Alu 1 311 0 9198 191 44 72 chr10 64157397 64157870 -76158895 + L1M1 LINE L1 5136 5621 -1384 226 167 56 0 chr10 64157870 64157924 -76158841 - LTR8A LTR ERV1 -670 57 1 9198 191 44 72 chr10 64157924 64158396 -76158369 + L1M1 LINE L1 5621 6105 -900 2390 99 0 0 chr10 64158396 64158698 -76158067 + AluSc SINE Alu 1 302 -7 9198 191 44 72 chr10 64158698 64158719 -76158046 + L1M1 LINE L1 6105 6125 -880 378 0 0 0 chr10 64158719 64158761 -76158004 + (CA)n Simple_repeat Simple_repeat 2 43 0 9198 191 44 72 chr10 64158761 64158838 -76157927 + L1M1 LINE L1 6125 6203 -802 1834 175 0 3 chr10 64158838 64159141 -76157624 + AluJb SINE Alu 3 304 -8 9198 191 44 72 chr10 64159141 64159546 -76157219 + L1M1 LINE L1 6203 6507 -498 1798 230 85 32 chr10 64159627 64159751 -76157014 + L1ME1 LINE L1 4640 4756 -1410 1873 145 0 20 chr10 64159751 64160055 -76156710 + AluSx SINE Alu 2 299 -13 1798 230 85 32 chr10 64160055 64160414 -76156351 + L1ME1 LINE L1 4756 5095 -1071 2270 105 3 0 chr10 64160414 64160710 -76156055 + AluSp SINE Alu 1 297 -16 1798 230 85 32 chr10 64160710 64161048 -76155717 + L1ME1 LINE L1 5095 5414 -752 2316 96 0 0 chr10 64161048 64161340 -76155425 + AluY SINE Alu 1 292 -19 1798 230 85 32 chr10 64161340 64161932 -76154833 + L1ME1 LINE L1 5414 6146 -20 21 36 0 0 chr10 64162651 64162679 -76154086 + AT_rich Low_complexity Low_complexity 1 28 0 389 164 0 14 chr10 64162781 64162854 -76153911 - AluJ/FRAM SINE Alu -3 299 228 2142 110 3 0 chr10 64163060 64163364 -76153401 - AluSp SINE Alu 0 305 1 1650 191 7 13 chr10 64163383 64163687 -76153078 - AluJo SINE Alu -10 302 1 294 179 0 0 chr10 64163875 64163931 -76152834 - L1MC5 LINE L1 -91 7870 7815 276 201 99 146 chr10 64163949 64164313 -76152452 - L1MC5 LINE L1 -308 7653 7307 256 171 171 11 chr10 64166011 64166099 -76150666 - MLT1I LTR MaLR -4 405 304 2011 126 7 0 chr10 64166139 64166417 -76150348 - AluSp SINE Alu -33 280 1 1475 166 123 3 chr10 64167212 64167562 -76149203 + L1MB7 LINE L1 4867 5258 -888 1364 164 71 25 chr10 64167569 64167893 -76148872 + L1MB7 LINE L1 5835 6173 -11 1054 194 133 15 chr10 64167897 64168160 -76148605 - AluJo SINE Alu -7 295 2 2222 100 0 0 chr10 64168870 64169170 -76147595 + AluSc SINE Alu 1 300 -9 316 238 0 0 chr10 64169291 64169371 -76147394 + LTR58 LTR ERV1 350 429 -250 256 169 141 28 chr10 64169752 64169823 -76146942 + MLT1J LTR MaLR 385 463 -48 21 0 0 0 chr10 64170212 64170233 -76146532 + AT_rich Low_complexity Low_complexity 1 21 0 2298 74 3 17 chr10 64170235 64170534 -76146231 - AluSp SINE Alu -18 295 1 1818 189 16 0 chr10 64170712 64171019 -76145746 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 64171299 64171320 -76145445 + AT_rich Low_complexity Low_complexity 1 21 0 883 278 70 65 chr10 64171329 64171734 -76145031 + L1MEc LINE L1 22 433 -5963 704 141 7 22 chr10 64171734 64171869 -76144896 + FLAM_C SINE Alu 1 133 0 883 278 70 65 chr10 64171869 64172081 -76144684 + L1MEc LINE L1 433 642 -5754 1914 161 3 0 chr10 64172757 64173056 -76143709 + AluSx SINE Alu 2 301 -11 4002 258 143 63 chr10 64173557 64176203 -76140562 + L2 LINE L2 453 3313 0 2011 123 0 0 chr10 64177225 64177493 -76139272 + AluSq SINE Alu 35 302 -11 216 0 0 0 chr10 64177504 64177528 -76139237 + (GA)n Simple_repeat Simple_repeat 2 25 0 301 277 98 9 chr10 64177954 64178066 -76138699 - MIR SINE MIR -39 223 102 189 281 237 7 chr10 64178139 64178274 -76138491 - L2 LINE L2 -215 3057 2892 721 320 28 24 chr10 64178417 64178664 -76138101 + MIR SINE MIR 3 250 -12 198 234 21 0 chr10 64179100 64179147 -76137618 - L2 LINE L2 -8 3305 3258 1627 242 88 62 chr10 64180048 64180436 -76136329 - MER21B LTR ERV1 -124 739 322 1810 162 3 10 chr10 64180436 64180750 -76136015 - AluJo SINE Alu 0 312 1 1627 242 88 62 chr10 64180750 64181077 -76135688 - MER21B LTR ERV1 -541 322 5 2190 100 0 0 chr10 64181404 64181710 -76135055 - AluSx SINE Alu 0 308 3 1330 109 0 0 chr10 64181762 64181936 -76134829 - AluSq SINE Alu -11 302 129 3109 268 81 66 chr10 64181939 64182083 -76134682 - L2 LINE L2 -25 3288 3148 1618 161 51 25 chr10 64182083 64182357 -76134408 + AluJo SINE Alu 1 281 -31 3109 268 81 66 chr10 64182357 64183001 -76133764 - L2 LINE L2 -165 3148 2515 2032 134 6 10 chr10 64183001 64183314 -76133451 - AluJb SINE Alu 0 312 1 3109 268 81 66 chr10 64183314 64184015 -76132750 - L2 LINE L2 -798 2515 1794 1389 151 5 0 chr10 64184895 64185107 -76131658 + AluSg/x SINE Alu 98 310 0 2025 138 0 0 chr10 64185283 64185595 -76131170 - AluSx SINE Alu 0 312 1 2178 99 3 0 chr10 64185974 64186286 -76130479 + AluSx SINE Alu 1 313 0 416 293 62 39 chr10 64186762 64186970 -76129795 + L1M4 LINE L1 4392 4604 -1542 1803 188 10 0 chr10 64186972 64187280 -76129485 + AluJb SINE Alu 1 311 -1 367 256 0 0 chr10 64187378 64187456 -76129309 + FRAM/FAM SINE Alu 1 77 -89 247 139 23 0 chr10 64187465 64187508 -76129257 + L1M3 LINE L1 5680 5723 -460 322 210 0 25 chr10 64187527 64187615 -76129150 + FAM SINE Alu 104 179 0 4635 209 79 20 chr10 64187621 64188570 -76128195 + L1MB4 LINE L1 3788 4680 -1500 843 200 134 66 chr10 64188570 64188890 -76127875 - MER2 DNA MER2_type -2 342 1 4635 209 79 20 chr10 64188890 64189372 -76127393 + L1MB4 LINE L1 4680 5132 -1048 195 42 0 0 chr10 64189372 64189396 -76127369 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 4635 209 79 20 chr10 64189396 64190013 -76126752 + L1MB4 LINE L1 5132 5958 -222 629 149 17 103 chr10 64190014 64190141 -76126624 + L1MB4 LINE L1 6020 6130 -50 2033 121 0 0 chr10 64190141 64190431 -76126334 + AluSx SINE Alu 12 301 -11 629 149 17 103 chr10 64190431 64190478 -76126287 + L1MB4 LINE L1 6130 6179 -1 2133 96 55 0 chr10 64190868 64191160 -76125605 - AluSx SINE Alu -4 308 1 351 303 0 0 chr10 64191280 64191369 -76125396 + MER3 DNA MER1_type 18 106 -103 1135 120 12 0 chr10 64191395 64191562 -76125203 - AluSg/x SINE Alu -10 302 134 2070 134 0 23 chr10 64191562 64191868 -76124897 - AluSx SINE Alu -13 299 1 624 216 47 6 chr10 64191928 64192099 -76124666 - L1MC5 LINE L1 -524 7437 7260 190 354 62 26 chr10 64192378 64192491 -76124274 + MER5A DNA MER1_type 64 180 -9 305 286 29 23 chr10 64193711 64193866 -76122899 - HsTC2 DNA Tc2 -1261 637 483 382 242 42 0 chr10 64194044 64194139 -76122626 + Charlie1 DNA MER1_type 43 141 -2620 307 115 49 0 chr10 64194219 64194280 -76122485 + Charlie1 DNA MER1_type 2622 2685 -76 311 369 18 0 chr10 64194891 64195002 -76121763 + MIR3 SINE MIR 4 116 -92 1646 182 14 10 chr10 64195347 64195643 -76121122 + AluJo SINE Alu 1 297 -15 1728 189 3 10 chr10 64195858 64196170 -76120595 - AluJo SINE Alu -2 310 1 310 179 0 0 chr10 64196358 64196414 -76120351 - L1MC5 LINE L1 -91 7870 7815 2091 202 73 112 chr10 64196432 64196980 -76119785 - L1MC5 LINE L1 -308 7653 7164 2119 120 0 10 chr10 64196980 64197281 -76119484 - AluSx SINE Alu -14 298 1 2091 202 73 112 chr10 64197281 64197790 -76118975 - L1MC5 LINE L1 -797 7164 6637 235 192 40 121 chr10 64198134 64198233 -76118532 - L1MC4a LINE L1 -1644 6164 6074 21 0 0 0 chr10 64198263 64198284 -76118481 + AT_rich Low_complexity Low_complexity 1 21 0 1077 226 111 36 chr10 64198329 64198744 -76118021 - L1MC4a LINE L1 -1881 5927 5482 455 256 72 66 chr10 64198805 64198915 -76117850 - L1MC4a LINE L1 -2950 3196 3088 1866 134 3 41 chr10 64198915 64199206 -76117559 - AluSg SINE Alu -30 280 1 1899 112 77 0 chr10 64199207 64199493 -76117272 - AluSq SINE Alu -5 308 1 455 256 72 66 chr10 64199493 64199727 -76117038 - L1MC4a LINE L1 -3057 3089 2848 453 176 11 11 chr10 64199748 64199839 -76116926 - FLAM SINE Alu -10 133 43 775 189 16 22 chr10 64199845 64200030 -76116735 - L1MC4a LINE L1 -3319 2827 2644 768 200 0 19 chr10 64200032 64200187 -76116578 + MLT1A1 LTR MaLR 3 154 -211 2350 88 7 0 chr10 64200187 64200495 -76116270 + AluSp SINE Alu 1 310 -3 342 128 86 94 chr10 64200496 64200613 -76116152 + L1M2 LINE L1 5323 5438 -862 362 373 83 0 chr10 64201135 64201352 -76115413 + L2 LINE L2 2700 2934 -380 207 286 160 25 chr10 64201813 64201932 -76114833 + MIR SINE MIR 106 240 -22 2173 110 7 7 chr10 64201991 64202300 -76114465 + AluSg SINE Alu 1 309 -1 1169 131 0 0 chr10 64202300 64202460 -76114305 + AluSg/x SINE Alu 132 291 -19 581 237 0 37 chr10 64202744 64202879 -76113886 - FLAM_A SINE Alu -2 131 2 464 245 83 22 chr10 64203495 64203634 -76113131 - MIR SINE MIR -67 141 42 2131 134 0 7 chr10 64203651 64203957 -76112808 - AluSx SINE Alu -8 304 1 223 359 144 25 chr10 64204971 64205291 -76111474 + L3 LINE CR1 437 794 -783 2441 265 101 56 chr10 64205292 64206458 -76110307 + HAL1 LINE L1 148 1466 -1041 2189 100 7 3 chr10 64206458 64206758 -76110007 + AluY SINE Alu 3 303 -8 2441 265 101 56 chr10 64206758 64207331 -76109434 + HAL1 LINE L1 1466 2012 -495 3567 158 41 16 chr10 64207608 64208290 -76108475 - LTR34 LTR ERV1 0 699 1 199 204 61 0 chr10 64208316 64208365 -76108400 + L2 LINE L2 3261 3312 -1 198 280 80 0 chr10 64208877 64208927 -76107838 - MIR SINE MIR -121 87 34 26 0 0 0 chr10 64209031 64209057 -76107708 + AT_rich Low_complexity Low_complexity 1 26 0 425 238 20 10 chr10 64209320 64209421 -76107344 + MLT1C LTR MaLR 366 467 0 423 205 159 3 chr10 64209422 64209620 -76107145 + L1ME3 LINE L1 5852 6091 -71 2390 85 3 0 chr10 64209628 64209933 -76106832 - AluSq SINE Alu -7 306 1 2167 113 0 10 chr10 64209936 64210237 -76106528 - AluSc SINE Alu -11 298 1 706 143 0 95 chr10 64210248 64210395 -76106370 - FLAM_C SINE Alu 0 133 1 1193 162 103 0 chr10 64210431 64210665 -76106100 - Tigger2 DNA MER2_type 0 2718 2461 3105 167 35 7 chr10 64210695 64211287 -76105478 - Tigger2 DNA MER2_type -2109 609 1 2342 87 3 0 chr10 64212320 64212619 -76104146 - AluY SINE Alu -11 300 1 23 0 0 0 chr10 64212914 64212937 -76103828 + AT_rich Low_complexity Low_complexity 1 23 0 1820 144 27 17 chr10 64212942 64213067 -76103698 + AluSx SINE Alu 3 125 -187 186 43 0 0 chr10 64213067 64213090 -76103675 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1820 144 27 17 chr10 64213090 64213256 -76103509 + AluSx SINE Alu 125 297 -15 23 33 0 0 chr10 64214680 64214710 -76102055 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 64214802 64214825 -76101940 + AT_rich Low_complexity Low_complexity 1 23 0 708 249 27 16 chr10 64216444 64216629 -76100136 - MER5A DNA MER1_type 0 189 3 2244 105 3 0 chr10 64217133 64217429 -76099336 + AluSg SINE Alu 1 297 -13 2157 117 0 3 chr10 64217441 64217731 -76099034 + AluSx SINE Alu 3 291 -21 192 40 0 0 chr10 64218166 64218191 -76098574 + (A)n Simple_repeat Simple_repeat 1 25 0 2277 89 3 0 chr10 64218191 64218483 -76098282 + AluSg SINE Alu 1 293 -17 497 249 48 90 chr10 64218555 64218750 -76098015 + L1M4 LINE L1 2849 3033 -3113 1499 149 31 87 chr10 64218750 64219071 -76097694 + AluJo SINE Alu 1 303 -9 497 249 48 90 chr10 64219071 64219236 -76097529 + L1M4 LINE L1 3033 3203 -2943 2260 86 3 0 chr10 64219388 64219678 -76097087 + AluSp SINE Alu 1 291 -22 406 241 38 8 chr10 64219775 64219905 -76096860 + L1ME3A LINE L1 6000 6134 -36 1443 189 28 91 chr10 64219933 64220329 -76096436 + MLT1B LTR MaLR 20 390 0 1926 121 40 0 chr10 64220465 64220737 -76096028 + AluSx SINE Alu 1 283 -29 3813 168 68 28 chr10 64221182 64221293 -76095472 - L1MB4 LINE L1 -6 6174 6069 2177 124 0 3 chr10 64221293 64221600 -76095165 - AluSq SINE Alu -7 306 1 3813 168 68 28 chr10 64221600 64222394 -76094371 - L1MB4 LINE L1 -111 6069 5233 1074 177 24 76 chr10 64222453 64222702 -76094063 - AluJo SINE Alu -76 236 1 1162 159 0 0 chr10 64222830 64223006 -76093759 - AluJb SINE Alu 0 312 137 23 0 0 0 chr10 64223584 64223607 -76093158 + AT_rich Low_complexity Low_complexity 1 23 0 1720 175 3 3 chr10 64223837 64224134 -76092631 + AluJo SINE Alu 3 299 -13 1363 182 84 25 chr10 64224429 64224704 -76092061 + AluJo SINE Alu 2 292 -20 1965 77 41 0 chr10 64224760 64225006 -76091759 + AluSg SINE Alu 35 290 -20 652 80 0 0 chr10 64225836 64225924 -76090841 - AluS SINE Alu -224 88 1 351 303 0 0 chr10 64226044 64226133 -76090632 + MER3 DNA MER1_type 18 106 -103 1135 120 12 0 chr10 64226159 64226326 -76090439 - AluSg/x SINE Alu -10 302 134 2070 134 0 23 chr10 64226326 64226632 -76090133 - AluSx SINE Alu -13 299 1 624 216 47 6 chr10 64226692 64226863 -76089902 - L1MC5 LINE L1 -524 7437 7260 190 354 62 26 chr10 64227142 64227255 -76089510 + MER5A DNA MER1_type 64 180 -9 305 286 29 23 chr10 64228475 64228630 -76088135 - HsTC2 DNA Tc2 -1261 637 483 382 242 42 0 chr10 64228808 64228903 -76087862 + Charlie1 DNA MER1_type 43 141 -2620 307 115 49 0 chr10 64228983 64229044 -76087721 + Charlie1 DNA MER1_type 2622 2685 -76 311 369 18 0 chr10 64229655 64229766 -76086999 + MIR3 SINE MIR 4 116 -92 1646 182 14 10 chr10 64230104 64230400 -76086365 + AluJo SINE Alu 1 297 -15 1969 155 7 3 chr10 64230615 64230924 -76085841 - AluJb SINE Alu -2 310 1 355 307 147 17 chr10 64230993 64231224 -76085541 - MER46C DNA MER2_type -76 262 2 260 325 60 37 chr10 64231660 64231928 -76084837 - MLT1L LTR MaLR 0 615 342 1827 146 4 11 chr10 64232147 64232427 -76084338 + AluJo SINE Alu 11 288 -24 181 301 27 41 chr10 64232496 64232569 -76084196 - L2 LINE L2 -1 3271 3200 21 36 0 0 chr10 64232620 64232648 -76084117 + AT_rich Low_complexity Low_complexity 1 28 0 198 143 0 0 chr10 64233705 64233740 -76083025 + (TGGA)n Simple_repeat Simple_repeat 3 37 0 25 65 0 0 chr10 64234244 64234290 -76082475 + AT_rich Low_complexity Low_complexity 1 46 0 1597 217 77 35 chr10 64234326 64234783 -76081982 + MLT1D LTR MaLR 1 476 -29 1788 167 3 10 chr10 64235069 64235369 -76081396 - AluJb SINE Alu -14 298 1 582 208 97 19 chr10 64235620 64235774 -76080991 - L1ME2 LINE L1 -14 6150 5985 453 140 0 60 chr10 64235885 64235985 -76080780 - FLAM_A SINE Alu -6 136 43 186 43 0 0 chr10 64238042 64238065 -76078700 + (CGG)n Simple_repeat Simple_repeat 2 24 0 1831 110 42 52 chr10 64239129 64239438 -76077327 + AluSq SINE Alu 1 306 -7 21 0 0 0 chr10 64240301 64240322 -76076443 + AT_rich Low_complexity Low_complexity 1 21 0 613 187 8 37 chr10 64240744 64240878 -76075887 + FLAM_A SINE Alu 10 139 -3 435 276 291 10 chr10 64241147 64241343 -76075422 - MIR SINE MIR -5 257 7 249 289 237 21 chr10 64241428 64241525 -76075240 - L2 LINE L2 -19 3253 3136 358 246 140 44 chr10 64241917 64242145 -76074620 + L2 LINE L2 3023 3272 -41 198 0 0 0 chr10 64242171 64242193 -76074572 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 229 238 32 16 chr10 64242621 64242684 -76074081 + GA-rich Low_complexity Low_complexity 1 64 0 22 35 0 0 chr10 64242808 64242837 -76073928 + AT_rich Low_complexity Low_complexity 1 29 0 1712 180 0 3 chr10 64243658 64243967 -76072798 + AluSx SINE Alu 1 308 0 29 28 0 0 chr10 64244096 64244132 -76072633 + AT_rich Low_complexity Low_complexity 1 36 0 2128 123 10 7 chr10 64244226 64244535 -76072230 - AluSx SINE Alu -2 310 1 2254 99 0 3 chr10 64244683 64244986 -76071779 - AluSc SINE Alu -7 302 1 2165 119 0 3 chr10 64245157 64245450 -76071315 - AluSx SINE Alu -20 292 1 2416 106 0 0 chr10 64245664 64245976 -76070789 + AluSq SINE Alu 1 312 -1 225 0 0 0 chr10 64246008 64246033 -76070732 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 273 253 11 32 chr10 64246034 64246129 -76070636 + L1ME3 LINE L1 5563 5655 -466 1807 144 10 23 chr10 64246347 64246653 -76070112 - AluJb SINE Alu -10 302 1 434 182 105 35 chr10 64246829 64246972 -76069793 + L1ME3 LINE L1 5942 6094 -68 270 191 12 48 chr10 64247521 64247605 -76069160 + L1ME1 LINE L1 866 946 -5477 566 276 49 120 chr10 64247606 64247830 -76068935 + L1ME1 LINE L1 913 1091 -5332 2110 132 0 3 chr10 64247830 64248125 -76068640 + AluSx SINE Alu 1 294 -18 566 276 49 120 chr10 64248125 64248350 -76068415 + L1ME1 LINE L1 1091 1330 -5093 1538 204 20 20 chr10 64248350 64248654 -76068111 + AluJo SINE Alu 1 304 -8 25 31 0 0 chr10 64248654 64248686 -76068079 + AT_rich Low_complexity Low_complexity 1 32 0 499 163 0 0 chr10 64248688 64248768 -76067997 + AluJ/FLAM SINE Alu 3 82 -230 322 254 75 20 chr10 64248789 64248990 -76067775 + L1ME1 LINE L1 4044 4255 -2686 * 2669 187 67 87 chr10 64248977 64250370 -76066395 + L1ME1 LINE L1 5284 6644 -317 1402 191 146 3 chr10 64250393 64250728 -76066037 - MER77 LTR ERV1 -8 597 215 814 196 13 7 chr10 64250734 64250887 -76065878 + FRAM SINE Alu 12 165 -11 671 259 52 37 chr10 64251077 64251482 -76065283 - L1MC5 LINE L1 -49 7912 7502 467 201 75 81 chr10 64251491 64251665 -76065100 - L1MC5 LINE L1 -516 7445 7273 709 253 19 0 chr10 64252227 64252385 -76064380 - FRAM SINE Alu -15 161 1 866 175 55 25 chr10 64253946 64254146 -76062619 + MER6B DNA MER2_type 2 207 -3 2124 137 0 0 chr10 64254257 64254556 -76062209 + AluSx SINE Alu 1 299 -13 623 269 87 23 chr10 64254567 64254786 -76061979 + MIR SINE MIR 21 253 -9 605 208 11 71 chr10 64255263 64255446 -76061319 - MER20 DNA MER1_type -7 212 41 473 226 108 72 chr10 64255856 64256051 -76060714 - MIR SINE MIR -49 213 12 294 167 17 17 chr10 64256051 64256111 -76060654 + AluS SINE Alu 2 61 -247 523 100 0 22 chr10 64256112 64256202 -76060563 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 206 125 153 0 chr10 64256978 64257050 -76059715 + (TTAAA)n Simple_repeat Simple_repeat 3 85 0 184 227 68 0 chr10 64257057 64257101 -76059664 + L2 LINE L2 3210 3256 -16 478 322 34 92 chr10 64257689 64258015 -76058750 - L2 LINE L2 0 3272 2966 318 67 0 0 chr10 64258041 64258086 -76058679 + (A)n Simple_repeat Simple_repeat 1 45 0 193 308 72 82 chr10 64258144 64258339 -76058426 - L2 LINE L2 -397 2917 2725 341 296 47 41 chr10 64258428 64258600 -76058165 + L2 LINE L2 1614 1786 -1528 297 278 46 37 chr10 64258626 64258734 -76058031 + L2 LINE L2 2973 3081 -232 267 318 68 11 chr10 64258832 64258920 -76057845 - MIR SINE MIR -125 137 45 557 338 99 21 chr10 64258960 64259228 -76057537 - L2 LINE L2 -1892 1422 1108 1123 146 9 69 chr10 64259228 64259461 -76057304 + MER20B DNA MER1_type 1 219 0 557 338 99 21 chr10 64259461 64259615 -76057150 - L2 LINE L2 -2206 1108 967 521 303 60 26 chr10 64259751 64259985 -76056780 - MIR SINE MIR -6 256 15 477 182 20 0 chr10 64260708 64260807 -76055958 + L1ME3A LINE L1 6019 6119 -51 1132 185 5 0 chr10 64260809 64261009 -76055756 + Tigger3(Golem) DNA MER2_type 1 201 -2828 2242 91 0 0 chr10 64261021 64261332 -76055433 + AluSq SINE Alu 1 311 0 1212 149 6 0 chr10 64261547 64261715 -76055050 - AluSx SINE Alu -143 169 1 2111 142 21 6 chr10 64261735 64262067 -76054698 + MER1B DNA MER1_type 1 337 0 785 251 109 59 chr10 64262093 64262313 -76054452 + L2 LINE L2 2920 3168 -145 2233 125 0 0 chr10 64262313 64262617 -76054148 - AluSc SINE Alu -5 304 1 785 251 109 59 chr10 64262617 64262771 -76053994 + L2 LINE L2 3168 3313 0 574 286 92 18 chr10 64262808 64263025 -76053740 - MIR SINE MIR 0 262 30 1166 157 60 5 chr10 64263938 64264154 -76052611 - AluJb SINE Alu 0 312 85 1836 141 0 31 chr10 64264287 64264613 -76052152 + AluSx SINE Alu 1 317 0 2269 84 0 60 chr10 64265153 64265485 -76051280 - AluSq SINE Alu -1 312 1 25 0 0 0 chr10 64265491 64265516 -76051249 + AT_rich Low_complexity Low_complexity 1 25 0 250 139 23 0 chr10 64265522 64265565 -76051200 - AluSg/x SINE Alu -138 164 121 2352 91 0 0 chr10 64265932 64266229 -76050536 + AluSp SINE Alu 1 297 -16 22 35 0 0 chr10 64266408 64266437 -76050328 + AT_rich Low_complexity Low_complexity 1 29 0 228 219 77 77 chr10 64266490 64266659 -76050106 + L1ME LINE L1 5575 5714 -407 200 221 0 0 chr10 64266684 64266735 -76050030 - MIR SINE MIR -68 140 98 1336 216 87 65 chr10 64267040 64267393 -76049372 + L1MC5 LINE L1 6673 7046 -915 1984 90 69 7 chr10 64267393 64267683 -76049082 + AluSq SINE Alu 1 308 -5 1336 216 87 65 chr10 64267683 64267927 -76048838 + L1MC5 LINE L1 7046 7283 -678 28 0 0 0 chr10 64267938 64267966 -76048799 + AT_rich Low_complexity Low_complexity 1 28 0 664 280 88 37 chr10 64268692 64269038 -76047727 + MLT1I LTR MaLR 58 392 -17 2463 131 100 6 chr10 64269167 64269648 -76047117 + L1MB8 LINE L1 5648 6173 -5 3852 131 27 21 chr10 64270691 64271393 -76045372 - L1MB1 LINE L1 0 6168 5463 1944 172 0 3 chr10 64272123 64272431 -76044334 + AluJb SINE Alu 1 307 -5 1952 107 37 0 chr10 64272435 64272707 -76044058 + AluSx SINE Alu 1 282 -30 948 105 0 0 chr10 64272707 64272859 -76043906 + (TGGA)n Simple_repeat Simple_repeat 3 154 0 276 305 76 23 chr10 64273061 64273192 -76043573 - L2 LINE L2 -203 3110 2973 341 296 47 41 chr10 64273218 64273390 -76043375 - L2 LINE L2 -1528 1786 1614 193 308 72 82 chr10 64273479 64273674 -76043091 + L2 LINE L2 2725 2917 -397 309 68 0 0 chr10 64273732 64273776 -76042989 + (T)n Simple_repeat Simple_repeat 1 44 0 422 330 17 103 chr10 64273781 64274129 -76042636 + L2 LINE L2 2955 3272 0 256 346 40 0 chr10 64274391 64274492 -76042273 - MIR SINE MIR -131 131 27 2366 93 3 0 chr10 64274851 64275161 -76041604 + AluY SINE Alu 1 311 0 2222 96 7 3 chr10 64275712 64276015 -76040750 + AluY SINE Alu 1 304 -7 23 0 0 0 chr10 64276118 64276141 -76040624 + AT_rich Low_complexity Low_complexity 1 23 0 537 254 101 0 chr10 64276270 64276408 -76040357 - MIR SINE MIR 0 262 111 745 317 130 18 chr10 64277564 64278111 -76038654 - L2 LINE L2 -55 3258 2639 1217 164 133 31 chr10 64278111 64278367 -76038398 + AluJo SINE Alu 1 282 -30 2345 72 0 16 chr10 64278386 64278690 -76038075 + AluY SINE Alu 1 299 -12 386 170 81 5 chr10 64278949 64279053 -76037712 - MER5A DNA MER1_type -37 152 31 9567 196 66 31 chr10 64279953 64280717 -76036048 - L1MC1 LINE L1 0 6613 5877 2259 106 0 3 chr10 64280717 64281019 -76035746 + AluSx SINE Alu 1 301 -11 9567 196 66 31 chr10 64281019 64283363 -76033402 - L1MC1 LINE L1 -736 5877 3616 2345 81 0 3 chr10 64283363 64283658 -76033107 - AluY SINE Alu -17 294 1 9567 196 66 31 chr10 64283658 64284692 -76032073 - L1MC1 LINE L1 -2997 3616 2620 1160 208 0 63 chr10 64284692 64284785 -76031980 - MER8 DNA MER2_type 0 239 142 2159 97 0 23 chr10 64284785 64285085 -76031680 + AluSg SINE Alu 1 293 -17 1160 208 0 63 chr10 64285085 64285246 -76031519 - MER8 DNA MER2_type -97 142 1 9567 196 66 31 chr10 64285246 64286489 -76030276 - L1MC1 LINE L1 -3993 2620 1422 5294 119 19 13 chr10 64286489 64286986 -76029779 + L1PA16 LINE L1 4814 5307 -859 2216 70 0 3 chr10 64286986 64287302 -76029463 + AluY SINE Alu 1 315 0 5294 119 19 13 chr10 64287302 64288147 -76028618 + L1PA16 LINE L1 5307 6163 -3 9567 196 66 31 chr10 64288147 64289140 -76027625 - L1MC1 LINE L1 -5191 1422 18 330 292 80 0 chr10 64289210 64289323 -76027442 - L1M4 LINE L1 -890 5256 5135 2282 125 0 0 chr10 64291142 64291447 -76025318 - AluSx SINE Alu -6 306 2 238 262 24 12 chr10 64291617 64291701 -76025064 - MER20B DNA MER1_type 0 783 699 630 259 201 18 chr10 64291861 64292204 -76024561 - MER20B DNA MER1_type -357 426 21 271 346 62 19 chr10 64292272 64292434 -76024331 + MIR SINE MIR 46 214 -48 189 269 11 108 chr10 64293590 64293683 -76023082 - MIR SINE MIR -80 182 99 355 310 58 77 chr10 64294532 64294793 -76021972 + L1M2 LINE L1 765 1020 -5829 * 477 308 92 85 chr10 64294640 64295436 -76021329 - L1M2 LINE L1 -5604 1245 586 215 276 65 94 chr10 64296632 64296714 -76020051 - L2 LINE L2 -191 3081 3005 1774 167 3 14 chr10 64296714 64297008 -76019757 + AluJo SINE Alu 12 302 -10 215 276 65 94 chr10 64297008 64297095 -76019670 - L2 LINE L2 -267 3005 2917 277 346 62 15 chr10 64297777 64297791 -76018974 + MIR SINE MIR 47 59 -203 1978 128 10 30 chr10 64297791 64298096 -76018669 - AluSx SINE Alu -13 299 1 277 346 62 15 chr10 64298096 64298211 -76018554 + MIR SINE MIR 59 182 -80 1217 114 6 0 chr10 64298211 64298377 -76018388 + AluSg/x SINE Alu 130 296 -16 180 250 83 42 chr10 64298377 64298449 -76018316 + MIR SINE MIR 170 244 -18 355 361 19 34 chr10 64298491 64298696 -76018069 + MIR3 SINE MIR 4 205 -3 2155 111 0 0 chr10 64298774 64299054 -76017711 - AluSq SINE Alu -17 296 17 217 318 61 0 chr10 64299208 64299274 -76017491 + MIR SINE MIR 7 76 -186 351 253 0 0 chr10 64299295 64299370 -76017395 + MIR SINE MIR 181 255 -7 267 272 26 82 chr10 64299627 64299895 -76016870 - L1ME LINE L1 -345 5776 5524 24 0 0 0 chr10 64300022 64300046 -76016719 + AT_rich Low_complexity Low_complexity 1 24 0 3277 255 107 54 chr10 64300532 64300741 -76016024 + L2 LINE L2 1584 1781 -1532 1899 160 0 29 chr10 64300741 64301048 -76015717 + AluJb SINE Alu 1 298 -14 3277 255 107 54 chr10 64301048 64302220 -76014545 + L2 LINE L2 1781 3042 -271 216 258 16 16 chr10 64302294 64302356 -76014409 + L2 LINE L2 3180 3241 -72 203 0 0 36 chr10 64302797 64302825 -76013940 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1771 141 3 34 chr10 64302827 64303118 -76013647 - AluJo SINE Alu -30 282 1 2263 94 0 10 chr10 64303128 64303426 -76013339 - AluSq SINE Alu -14 299 5 816 160 216 28 chr10 64304644 64304825 -76011940 - MER20 DNA MER1_type -4 215 1 603 170 165 60 chr10 64304878 64305060 -76011705 - MER3 DNA MER1_type 0 209 9 2150 68 29 0 chr10 64305754 64306035 -76010730 + AluY SINE Alu 23 311 0 1600 120 0 29 chr10 64306038 64306279 -76010486 + AluJb SINE Alu 72 305 -7 289 304 98 43 chr10 64306311 64306495 -76010270 + L3 LINE CR1 1272 1465 -112 2182 101 3 3 chr10 64307062 64307359 -76009406 - AluSx SINE Alu -15 297 1 1890 188 3 0 chr10 64307595 64307899 -76008866 - AluJo SINE Alu -5 307 3 506 299 60 31 chr10 64308676 64309264 -76007501 + L1ME3 LINE L1 4458 5062 -1084 617 289 88 25 chr10 64309344 64309583 -76007182 - MIR SINE MIR -4 258 5 1253 265 53 35 chr10 64309983 64310667 -76006098 + L1ME3 LINE L1 5262 5957 -207 2315 108 0 0 chr10 64311803 64312108 -76004657 + AluSx SINE Alu 1 305 -7 279 237 124 10 chr10 64312175 64312272 -76004493 + 7SK RNA RNA 3 110 -83 772 169 0 16 chr10 64312864 64312988 -76003777 + FLAM_A SINE Alu 2 123 -10 365 243 56 65 chr10 64313108 64313215 -76003550 - MER5B DNA MER1_type -42 136 31 207 359 26 39 chr10 64313440 64313596 -76003169 + L3 LINE CR1 321 474 -1103 383 247 108 38 chr10 64313806 64313964 -76002801 + HAL1b LINE L1 747 915 -433 412 289 190 24 chr10 64313970 64314102 -76002663 + HAL1b LINE L1 954 1063 -285 623 224 0 15 chr10 64314102 64314236 -76002529 - FLAM_C SINE Alu 0 133 2 412 289 190 24 chr10 64314236 64314435 -76002330 + HAL1b LINE L1 1063 1340 -8 21 36 0 0 chr10 64314474 64314502 -76002263 + AT_rich Low_complexity Low_complexity 1 28 0 2218 109 13 0 chr10 64315419 64315723 -76001042 - AluSx SINE Alu 0 312 5 415 195 0 0 chr10 64316479 64316566 -76000199 - MLT1H1 LTR MaLR -2 553 467 1028 204 0 15 chr10 64316651 64316852 -75999913 - AluJo SINE Alu -16 296 99 272 313 175 12 chr10 64317018 64317178 -75999587 - L2 LINE L2 -1 3312 3127 * 539 230 133 12 chr10 64317168 64317333 -75999432 - MIR SINE MIR 0 262 78 23 0 0 0 chr10 64318515 64318538 -75998227 + AT_rich Low_complexity Low_complexity 1 23 0 899 163 33 11 chr10 64318538 64318722 -75998043 - L1MA5A LINE L1 -44 6253 6066 2326 96 7 0 chr10 64318722 64319024 -75997741 - AluSc SINE Alu -5 304 1 876 86 0 0 chr10 64319032 64319148 -75997617 - AluSg/x SINE Alu -5 304 189 1018 222 225 30 chr10 64319258 64319751 -75997014 - L2 LINE L2 -239 3074 2490 216 227 0 45 chr10 64319753 64319819 -75996946 - L2 LINE L2 -1102 2212 2150 943 245 52 87 chr10 64319819 64320278 -75996487 + L1M4 LINE L1 4625 5054 -1092 2388 89 0 0 chr10 64320278 64320571 -75996194 - AluSg SINE Alu -17 293 1 943 245 52 87 chr10 64320571 64320788 -75995977 + L1M4 LINE L1 5054 5277 -869 1593 183 4 0 chr10 64322637 64322900 -75993865 + AluJo SINE Alu 1 264 -48 1144 174 103 4 chr10 64322906 64323159 -75993606 + L1MC3 LINE L1 6246 6523 -1262 4065 165 145 25 chr10 64324372 64325364 -75991401 + L1MC3 LINE L1 6673 7783 -2 272 278 68 68 chr10 64325363 64325474 -75991291 - L1MC4 LINE L1 -161 7881 7771 * 2283 98 0 23 chr10 64325474 64325780 -75990985 + AluY SINE Alu 1 299 -12 272 278 68 68 chr10 64325780 64325934 -75990831 - L1MC4 LINE L1 -270 7772 7616 224 206 27 82 chr10 64326723 64326796 -75989969 + L2 LINE L2 3233 3301 -12 2450 53 0 13 chr10 64327168 64327468 -75989297 + AluY SINE Alu 1 296 -15 343 301 116 27 chr10 64327873 64328019 -75988746 + MIR SINE MIR 7 165 -97 2014 94 60 20 chr10 64329475 64329773 -75986992 - AluSx SINE Alu -2 310 1 2591 0 0 0 chr10 64329921 64330286 -75986479 - AluYa5 SINE Alu 0 365 1 1083 159 68 47 chr10 64330449 64330745 -75986020 + MER63B DNA MER1_type 1 302 -134 204 222 22 0 chr10 64330913 64330958 -75985807 - MER5B DNA MER1_type -129 49 4 325 262 63 16 chr10 64331634 64331760 -75985005 + MER117 DNA MER1_type 65 196 -1 1360 138 178 16 chr10 64331856 64332109 -75984656 + AluSg1 SINE Alu 1 294 -15 22 35 0 0 chr10 64332468 64332497 -75984268 + AT_rich Low_complexity Low_complexity 1 29 0 689 272 63 13 chr10 64332913 64333152 -75983613 + MIR SINE MIR 12 262 0 353 258 20 33 chr10 64333224 64333375 -75983390 + L1ME4a LINE L1 5784 5932 -189 312 255 9 57 chr10 64333480 64333586 -75983179 + L1MC5 LINE L1 7832 7932 -29 2198 116 3 3 chr10 64335607 64335908 -75980857 - AluSx SINE Alu -11 301 1 2114 171 26 0 chr10 64336188 64336568 -75980197 + MLT1B LTR MaLR 1 390 0 931 124 0 0 chr10 64336656 64336793 -75979972 + L1MC3 LINE L1 6668 6804 -981 638 153 0 0 chr10 64336793 64336891 -75979874 - Tigger7 DNA MER2_type 0 2487 2390 428 161 0 69 chr10 64336893 64336980 -75979785 - Tigger7 DNA MER2_type -469 264 184 2522 182 93 5 chr10 64336988 64337566 -75979199 + L1MC3 LINE L1 7118 7746 -39 2057 141 7 0 chr10 64337692 64337989 -75978776 + AluSx SINE Alu 1 299 -13 231 225 138 0 chr10 64338083 64338163 -75978602 + L1ME4a LINE L1 5539 5629 -492 1939 136 3 11 chr10 64338327 64338613 -75978152 + AluSx SINE Alu 1 284 -28 227 265 51 10 chr10 64339036 64339134 -75977631 + L1ME4a LINE L1 5991 6092 -29 2348 74 3 3 chr10 64339238 64339535 -75977230 - AluY SINE Alu -14 297 1 24 32 0 0 chr10 64339535 64339566 -75977199 + AT_rich Low_complexity Low_complexity 1 31 0 2321 165 104 51 chr10 64340548 64341056 -75975709 - L1MB5 LINE L1 0 6174 5640 488 226 87 74 chr10 64341547 64341617 -75975148 - MER5C DNA MER1_type 0 324 256 2402 73 0 3 chr10 64341617 64341918 -75974847 - AluY SINE Alu -11 300 1 488 226 87 74 chr10 64341918 64342002 -75974763 - MER5C DNA MER1_type -68 256 175 1917 153 0 26 chr10 64342002 64342310 -75974455 - AluJo SINE Alu -8 304 5 488 226 87 74 chr10 64342310 64342464 -75974301 - MER5C DNA MER1_type -149 175 11 2005 145 3 0 chr10 64343011 64343300 -75973465 + AluJb SINE Alu 1 290 -22 256 88 0 0 chr10 64343546 64343580 -75973185 + U2 snRNA snRNA 1 34 -154 651 170 59 0 chr10 64343795 64343930 -75972835 - L1PA15 LINE L1 0 6165 6023 1926 133 0 14 chr10 64344184 64344463 -75972302 + AluJb SINE Alu 1 275 -37 1784 192 79 58 chr10 64344618 64345087 -75971678 - MLT1D LTR MaLR -22 483 5 270 377 53 9 chr10 64345155 64345269 -75971496 - MIR3 SINE MIR -87 121 3 1847 80 13 8 chr10 64345657 64345896 -75970869 - L1PA8 LINE L1 -1 6171 5932 593 191 116 5 chr10 64346013 64346202 -75970563 + L2 LINE L2 3104 3313 0 1446 265 98 74 chr10 64347322 64348199 -75968566 - HAL1 LINE L1 0 2507 1590 2365 95 7 0 chr10 64348199 64348503 -75968262 - AluSg SINE Alu -2 308 3 1446 265 98 74 chr10 64348503 64348867 -75967898 - HAL1 LINE L1 -917 1590 1236 295 309 53 0 chr10 64349054 64349148 -75967617 - L2 LINE L2 -1 3271 3173 1604 181 0 21 chr10 64349163 64349444 -75967321 + AluJo SINE Alu 9 283 -29 292 276 69 25 chr10 64349753 64349906 -75966859 + MIR SINE MIR 7 162 -62 9424 118 16 8 chr10 64350267 64351733 -75965032 + L1P LINE L1 3595 5073 -1073 893 123 7 41 chr10 64352002 64352148 -75964617 - AluJb SINE Alu -171 141 1 406 214 0 0 chr10 64353038 64353108 -75963657 + AluS SINE Alu 2 71 -241 36 53 0 0 chr10 64353788 64353845 -75962920 + AT_rich Low_complexity Low_complexity 1 57 0 28 0 0 0 chr10 64353879 64353907 -75962858 + AT_rich Low_complexity Low_complexity 1 28 0 838 178 14 0 chr10 64353926 64354072 -75962693 + AluJb SINE Alu 165 312 0 1757 164 9 28 chr10 64354260 64354578 -75962187 - AluJb SINE Alu 0 312 1 2211 108 0 10 chr10 64355526 64355822 -75960943 - AluSg SINE Alu -17 293 1 608 175 35 0 chr10 64356027 64356141 -75960624 - L1PA8 LINE L1 -8 6164 6047 1609 171 45 39 chr10 64356666 64356976 -75959789 + AluJb SINE Alu 1 312 0 1036 233 0 0 chr10 64357100 64357289 -75959476 + MER5A DNA MER1_type 1 189 0 196 219 0 0 chr10 64357303 64357344 -75959421 - MIR SINE MIR -108 154 114 209 236 42 42 chr10 64357513 64357585 -75959180 + MIR SINE MIR 118 189 -73 1593 171 10 20 chr10 64358011 64358309 -75958456 - AluJb SINE Alu -17 295 1 1112 257 116 47 chr10 64358408 64359047 -75957718 - L1ME4a LINE L1 -57 6064 5382 387 258 35 76 chr10 64359132 64359330 -75957435 - LTR1B LTR ERV1 0 826 637 508 197 0 17 chr10 64359682 64359799 -75956966 + AluSg/x SINE Alu 182 296 -13 359 280 89 44 chr10 64359803 64359899 -75956866 - L2 LINE L2 -809 2505 2415 2323 95 3 3 chr10 64359899 64360204 -75956561 + AluSp SINE Alu 1 305 -8 359 280 89 44 chr10 64360204 64360332 -75956433 - L2 LINE L2 -899 2415 2271 357 200 1 0 chr10 64360415 64360484 -75956281 - AluJ/FLAM SINE Alu -239 63 2 815 164 0 0 chr10 64360581 64360703 -75956062 + FLAM_C SINE Alu 1 122 -21 262 357 36 41 chr10 64360925 64361121 -75955644 + MIR SINE MIR 16 210 -52 2318 98 3 0 chr10 64361568 64361875 -75954890 - AluSc SINE Alu -1 308 1 28 0 0 0 chr10 64361878 64361906 -75954859 + AT_rich Low_complexity Low_complexity 1 28 0 296 79 0 0 chr10 64362427 64362465 -75954300 + AluJo/FLAM SINE Alu 85 122 -180 278 77 0 0 chr10 64362465 64362532 -75954233 - Alu SINE Alu 0 313 247 246 315 87 22 chr10 64362736 64362828 -75953937 + L2 LINE L2 3147 3244 -28 180 0 0 0 chr10 64363562 64363582 -75953183 + (T)n Simple_repeat Simple_repeat 1 20 0 2348 81 0 19 chr10 64364721 64365028 -75951737 + AluY SINE Alu 1 301 -10 23 54 0 0 chr10 64365399 64365436 -75951329 + AT_rich Low_complexity Low_complexity 1 37 0 300 281 144 62 chr10 64365585 64365745 -75951020 - MER5B DNA MER1_type 0 178 6 468 276 164 0 chr10 64365768 64365920 -75950845 + MER5A DNA MER1_type 13 189 0 2133 134 0 7 chr10 64366255 64366554 -75950211 - AluJo SINE Alu -15 297 1 1612 179 24 7 chr10 64366986 64367276 -75949489 - AluJo SINE Alu -17 295 1 544 279 81 10 chr10 64367277 64367474 -75949291 - HAL1 LINE L1 -1550 957 747 227 103 26 0 chr10 64367474 64367513 -75949252 + GA-rich Low_complexity Low_complexity 2 41 0 1085 179 0 10 chr10 64368803 64368998 -75947767 + AluJo SINE Alu 112 304 -8 1871 139 7 0 chr10 64369250 64369530 -75947235 - AluSx SINE Alu -30 282 1 21 89 0 0 chr10 64370243 64370299 -75946466 + AT_rich Low_complexity Low_complexity 1 56 0 216 0 0 0 chr10 64370322 64370346 -75946419 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1681 174 4 4 chr10 64370361 64370636 -75946129 - AluJo SINE Alu -37 275 1 2051 76 0 19 chr10 64370950 64371213 -75945552 - AluSp SINE Alu -55 258 1 746 270 86 59 chr10 64371611 64372019 -75944746 - LTR16A LTR ERVL -7 443 25 181 310 17 0 chr10 64372081 64372139 -75944626 - MIR SINE MIR -120 142 84 285 356 62 18 chr10 64372156 64372345 -75944420 - MIR3 SINE MIR -44 164 8 269 185 111 25 chr10 64372480 64372561 -75944204 + MIR SINE MIR 105 192 -70 2006 87 56 11 chr10 64372563 64372849 -75943916 + AluSg1 SINE Alu 1 299 -10 2010 212 78 16 chr10 64373619 64374118 -75942647 - MLT1F LTR MaLR 0 542 13 1921 157 0 13 chr10 64374515 64374814 -75941951 - AluJo SINE Alu -17 295 1 3806 99 0 6 chr10 64376030 64376545 -75940220 - L1PB1 LINE L1 -2 6149 5638 2299 87 34 0 chr10 64376572 64376870 -75939895 - AluSp SINE Alu -5 308 1 330 276 20 20 chr10 64376891 64376989 -75939776 - L2 LINE L2 -668 2646 2549 252 0 0 0 chr10 64377480 64377508 -75939257 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr10 64377982 64378003 -75938762 + AT_rich Low_complexity Low_complexity 1 21 0 1710 176 3 14 chr10 64378530 64378665 -75938100 + AluJb SINE Alu 1 136 -176 2292 112 3 0 chr10 64378665 64378970 -75937795 + AluSp SINE Alu 2 307 -6 1710 176 3 14 chr10 64378970 64379129 -75937636 + AluJb SINE Alu 136 292 -20 312 231 0 0 chr10 64379129 64379207 -75937558 + (TA)n Simple_repeat Simple_repeat 1 78 0 2445 50 7 10 chr10 64379574 64379872 -75936893 - AluY SINE Alu -14 297 1 29 0 0 0 chr10 64380573 64380602 -75936163 + AT_rich Low_complexity Low_complexity 1 29 0 501 219 90 13 chr10 64380726 64380881 -75935884 + L1ME4a LINE L1 5944 6110 -11 2271 116 0 0 chr10 64380890 64381193 -75935572 + AluSx SINE Alu 1 303 -9 247 329 71 7 chr10 64381305 64381445 -75935320 - L2 LINE L2 -567 2747 2599 2403 97 7 0 chr10 64382053 64382362 -75934403 - AluSx SINE Alu -1 311 1 294 241 0 0 chr10 64382403 64382461 -75934304 + L2 LINE L2 3215 3272 0 196 232 87 29 chr10 64382842 64382911 -75933854 - L3 LINE CR1 -3 1574 1502 2184 61 0 4 chr10 64383260 64383524 -75933241 - AluY SINE Alu -19 292 30 908 170 50 6 chr10 64383622 64383804 -75932961 - MIR SINE MIR -24 238 49 1255 280 52 25 chr10 64384052 64384791 -75931974 - L2 LINE L2 -17 3296 2533 2393 107 0 0 chr10 64386038 64386348 -75930417 + AluSg SINE Alu 1 310 0 2035 122 31 7 chr10 64386352 64386471 -75930294 + AluSc SINE Alu 1 116 -193 255 93 0 0 chr10 64386471 64386514 -75930251 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2035 122 31 7 chr10 64386514 64386688 -75930077 + AluSc SINE Alu 116 301 -8 976 121 8 0 chr10 64386799 64386931 -75929834 - FLAM_C SINE Alu 0 133 1 194 262 0 24 chr10 64387475 64387517 -75929248 + L2 LINE L2 3141 3181 -91 236 277 59 114 chr10 64387659 64387798 -75928967 - MIR SINE MIR -2 260 136 1543 186 3 18 chr10 64387798 64388083 -75928682 + AluJo SINE Alu 2 282 -30 236 277 59 114 chr10 64388083 64388163 -75928602 - MIR SINE MIR -126 136 53 688 101 0 0 chr10 64389828 64389917 -75926848 + AluSg/x SINE Alu 203 291 -21 908 274 123 27 chr10 64389918 64390326 -75926439 + HAL1 LINE L1 1463 1909 -598 2200 113 0 7 chr10 64390391 64390682 -75926083 + AluSq SINE Alu 1 289 -24 181 0 69 0 chr10 64390693 64390722 -75926043 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 314 220 261 4 chr10 64390820 64391065 -75925700 + HAL1 LINE L1 1967 2274 -233 319 294 130 0 chr10 64391581 64391673 -75925092 - L2 LINE L2 -2 3311 3208 2531 66 0 0 chr10 64391786 64392089 -75924676 + AluY SINE Alu 1 303 -8 432 338 23 15 chr10 64393534 64393667 -75923098 + MIR3 SINE MIR 54 187 -21 933 189 63 19 chr10 64393669 64393875 -75922890 + MER20 DNA MER1_type 1 215 -4 541 85 51 25 chr10 64395018 64395136 -75921629 + CT-rich Low_complexity Low_complexity 4 124 0 866 219 0 0 chr10 64395139 64395303 -75921462 - FRAM SINE Alu -1 165 2 22 0 0 0 chr10 64395333 64395355 -75921410 + AT_rich Low_complexity Low_complexity 1 22 0 996 175 0 0 chr10 64397544 64397721 -75919044 + MER3 DNA MER1_type 23 199 -10 2091 121 0 3 chr10 64397925 64398215 -75918550 + AluSc SINE Alu 1 289 -20 566 63 13 0 chr10 64398215 64398294 -75918471 + (GGAA)n Simple_repeat Simple_repeat 1 80 0 423 326 33 55 chr10 64398503 64398776 -75917989 - L1ME2 LINE L1 -220 5944 5678 216 0 0 0 chr10 64398779 64398803 -75917962 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 237 253 32 0 chr10 64399467 64399540 -75917225 + MIR SINE MIR 78 153 -55 243 62 0 0 chr10 64399752 64399784 -75916981 + MER69 DNA AcHobo 1 32 -2494 2291 107 3 3 chr10 64399954 64400263 -75916502 - AluSx SINE Alu -3 309 1 357 182 53 68 chr10 64400265 64400397 -75916368 + MER69 DNA AcHobo 2396 2525 -1 334 228 76 11 chr10 64400504 64400596 -75916169 + MIR3 SINE MIR 90 187 -21 24 0 0 0 chr10 64400637 64400661 -75916104 + AT_rich Low_complexity Low_complexity 1 24 0 2331 95 0 7 chr10 64400775 64401080 -75915685 - AluSg SINE Alu -7 303 1 464 257 62 7 chr10 64401513 64401657 -75915108 - MIR3 SINE MIR -2 206 55 244 212 282 0 chr10 64401846 64401931 -75914834 + MER34 LTR ERV1 6 114 -428 1906 82 0 8 chr10 64402713 64402956 -75913809 - AluY SINE Alu -70 241 1 950 166 57 0 chr10 64403059 64403234 -75913531 + MER5A DNA MER1_type 1 185 -4 34 0 0 0 chr10 64403793 64403827 -75912938 + AT_rich Low_complexity Low_complexity 1 34 0 188 291 64 64 chr10 64403848 64403958 -75912807 - L2 LINE L2 -219 3053 2944 1864 157 22 22 chr10 64404331 64404643 -75912122 - AluJo SINE Alu 0 312 1 21 57 0 0 chr10 64405738 64405773 -75910992 + AT_rich Low_complexity Low_complexity 1 35 0 2399 73 0 0 chr10 64407117 64407417 -75909348 - AluSc SINE Alu -9 300 1 405 0 0 0 chr10 64408169 64408214 -75908551 + (TG)n Simple_repeat Simple_repeat 2 46 0 299 236 34 34 chr10 64410213 64410302 -75906463 + L2 LINE L2 2472 2560 -754 1478 204 93 11 chr10 64410723 64411090 -75905675 - MLT2C1 LTR ERVL 0 397 1 1877 157 10 7 chr10 64411114 64411407 -75905358 + AluJb SINE Alu 1 294 -18 26 0 0 0 chr10 64411458 64411484 -75905281 + AT_rich Low_complexity Low_complexity 1 26 0 2006 139 10 13 chr10 64411672 64411973 -75904792 + AluJb SINE Alu 1 300 -12 832 141 0 0 chr10 64415550 64415671 -75901094 + AluJb SINE Alu 185 305 -7 405 249 178 18 chr10 64415679 64415848 -75900917 + L3 LINE CR1 1297 1492 -85 296 209 104 78 chr10 64416077 64416192 -75900573 + MER5A DNA MER1_type 44 161 -28 450 0 0 0 chr10 64416609 64416659 -75900106 + (CA)n Simple_repeat Simple_repeat 2 51 0 379 185 151 89 chr10 64416873 64417019 -75899746 + L2 LINE L2 3159 3313 0 2497 103 5 36 chr10 64418228 64418565 -75898200 + THE1C LTR MaLR 1 327 -48 2111 113 3 0 chr10 64418565 64418878 -75897887 + AluSx SINE Alu 1 314 0 2497 103 5 36 chr10 64418878 64418926 -75897839 + THE1C LTR MaLR 327 375 0 397 302 93 14 chr10 64418926 64419065 -75897700 - MIR SINE MIR -108 154 5 24 0 0 0 chr10 64419280 64419304 -75897461 + AT_rich Low_complexity Low_complexity 1 24 0 1863 169 61 0 chr10 64419521 64419864 -75896901 + MLT1A1 LTR MaLR 1 364 -1 181 182 30 0 chr10 64419869 64419902 -75896863 + MER5B DNA MER1_type 7 40 -138 2237 123 0 0 chr10 64419952 64420254 -75896511 + AluSx SINE Alu 1 302 -10 317 223 32 75 chr10 64420269 64420363 -75896402 + MER5B DNA MER1_type 78 167 -11 2087 108 4 0 chr10 64420743 64421021 -75895744 + AluSx SINE Alu 25 303 -9 2303 104 0 3 chr10 64422499 64422798 -75893967 - AluSc SINE Alu -11 298 1 544 303 38 96 chr10 64422887 64423201 -75893564 + L2 LINE L2 2972 3267 -5 214 283 33 0 chr10 64423229 64423289 -75893476 - MIR3 SINE MIR -6 202 141 2217 123 0 0 chr10 64423802 64424102 -75892663 + AluSx SINE Alu 1 300 -12 198 103 0 0 chr10 64424116 64424145 -75892620 + (A)n Simple_repeat Simple_repeat 1 29 0 650 276 25 65 chr10 64424332 64424453 -75892312 - MER58A DNA MER1_type -2224 196 85 2334 99 3 0 chr10 64424453 64424756 -75892009 - AluSx SINE Alu -8 304 1 650 276 25 65 chr10 64424756 64424833 -75891932 - MER58A DNA MER1_type -2335 85 6 976 87 0 8 chr10 64425178 64425304 -75891461 + AluSg SINE Alu 1 125 -185 24 32 0 0 chr10 64425304 64425335 -75891430 + AT_rich Low_complexity Low_complexity 1 31 0 2162 110 4 0 chr10 64425344 64425655 -75891110 + AluSx SINE Alu 2 313 0 325 317 68 43 chr10 64425712 64425873 -75890892 + HAL1b LINE L1 39 203 -1145 319 331 86 48 chr10 64425926 64426298 -75890467 + L1MC4a LINE L1 6074 6459 -1349 2258 105 0 10 chr10 64426304 64426608 -75890157 - AluSx SINE Alu -11 301 1 402 192 0 0 chr10 64427442 64427520 -75889245 + AluSg/x SINE Alu 216 293 -16 2223 111 0 0 chr10 64427728 64428025 -75888740 - AluSg SINE Alu -13 297 1 577 325 66 51 chr10 64428301 64428828 -75887937 + L1ME4a LINE L1 4761 5295 -851 543 237 207 61 chr10 64428990 64429471 -75887294 - MLT1G1 LTR MaLR -3 592 1 538 260 113 3 chr10 64429473 64429721 -75887044 + L1ME4a LINE L1 5499 5775 -346 274 253 13 0 chr10 64429849 64429924 -75886841 + L1ME4a LINE L1 5952 6027 -94 261 0 0 0 chr10 64430049 64430078 -75886687 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 339 175 0 0 chr10 64430112 64430169 -75886596 - AluS SINE Alu -243 57 1 2217 101 7 3 chr10 64430264 64430560 -75886205 - AluSx SINE Alu -15 297 1 343 350 18 12 chr10 64430632 64430795 -75885970 + L2 LINE L2 2593 2756 -558 362 279 40 138 chr10 64430911 64431209 -75885556 + L2 LINE L2 3004 3272 0 305 221 95 44 chr10 64431557 64431715 -75885050 - L1ME4a LINE L1 0 6121 5956 290 223 0 61 chr10 64431761 64431880 -75884885 + L2 LINE L2 2857 2966 -306 1719 157 0 0 chr10 64432157 64432405 -75884360 - AluJb SINE Alu -54 258 11 2440 77 0 13 chr10 64432528 64432841 -75883924 - AluSx SINE Alu -3 309 1 24 32 0 0 chr10 64432841 64432872 -75883893 + AT_rich Low_complexity Low_complexity 1 31 0 2086 165 104 51 chr10 64433854 64434362 -75882403 - L1MB5 LINE L1 0 6174 5640 489 209 111 85 chr10 64434853 64434923 -75881842 - MER5C DNA MER1_type 0 324 257 2385 73 0 3 chr10 64434923 64435224 -75881541 - AluY SINE Alu -11 300 1 489 209 111 85 chr10 64435224 64435308 -75881457 - MER5C DNA MER1_type -67 257 177 1949 157 0 26 chr10 64435308 64435620 -75881145 - AluJo SINE Alu -8 304 1 489 209 111 85 chr10 64435620 64435770 -75880995 - MER5C DNA MER1_type -147 177 11 2019 145 3 0 chr10 64436317 64436606 -75880159 + AluJb SINE Alu 1 290 -22 241 88 0 0 chr10 64436852 64436886 -75879879 + U2 snRNA snRNA 1 34 -154 704 86 60 0 chr10 64437105 64437221 -75879544 - L1PA13 LINE L1 -2 6161 6039 1929 133 0 14 chr10 64437490 64437769 -75878996 + AluJb SINE Alu 1 275 -37 1538 195 79 59 chr10 64437924 64438395 -75878370 - MLT1D LTR MaLR -22 483 4 228 350 110 9 chr10 64438400 64438572 -75878193 - MIR SINE MIR -64 198 7 1727 80 13 8 chr10 64438962 64439201 -75877564 - L1PA8 LINE L1 -1 6171 5932 613 191 116 5 chr10 64439318 64439507 -75877258 + L2 LINE L2 3104 3313 0 850 248 64 33 chr10 64440629 64440988 -75875777 - HAL1 LINE L1 0 2507 2138 631 268 110 5 chr10 64441004 64441213 -75875552 + MIR SINE MIR 2 232 -30 413 280 120 23 chr10 64441230 64441405 -75875360 - HAL1 LINE L1 -364 2143 1952 2369 95 7 0 chr10 64441506 64441810 -75874955 - AluSg SINE Alu -2 308 3 1879 226 163 34 chr10 64441834 64442378 -75874387 - HAL1 LINE L1 -920 1587 915 2217 95 3 0 chr10 64442378 64442691 -75874074 - AluSp SINE Alu 0 314 1 1879 226 163 34 chr10 64442691 64442905 -75873860 - HAL1 LINE L1 -1592 915 730 693 219 74 54 chr10 64442909 64443285 -75873480 - MLT1C LTR MaLR -5 462 43 1657 187 55 42 chr10 64443285 64443670 -75873095 - MLT1B LTR MaLR 0 390 1 693 219 74 54 chr10 64443670 64443714 -75873051 - MLT1C LTR MaLR -424 43 1 1796 266 115 20 chr10 64443718 64444088 -75872677 - HAL1 LINE L1 -1779 728 395 1187 210 30 66 chr10 64444088 64444393 -75872372 - AluJo SINE Alu -8 294 1 1796 266 115 20 chr10 64444393 64444683 -75872082 - HAL1 LINE L1 -2112 395 5 261 75 0 0 chr10 64444733 64444773 -75871992 + (TATG)n Simple_repeat Simple_repeat 2 41 0 2229 81 0 0 chr10 64444780 64445052 -75871713 - AluSg SINE Alu -34 276 5 606 129 11 43 chr10 64445149 64445242 -75871523 + AluJ/FLAM SINE Alu 2 91 -221 26 50 0 0 chr10 64446269 64446309 -75870456 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr10 64446475 64446500 -75870265 + AT_rich Low_complexity Low_complexity 1 25 0 837 134 0 0 chr10 64446507 64446626 -75870139 - FLAM_C SINE Alu -24 119 1 305 264 44 0 chr10 64446627 64446718 -75870047 - L2 LINE L2 0 3313 3219 277 241 92 23 chr10 64447439 64447526 -75869239 - MLT1J1 LTR MaLR -166 280 188 202 317 27 77 chr10 64448004 64448225 -75868540 + L2 LINE L2 1488 1697 -1617 1262 253 113 32 chr10 64448362 64449094 -75867671 - L2 LINE L2 0 3313 2509 605 250 75 61 chr10 64449098 64449310 -75867455 + LTR33 LTR ERVL 2 216 -305 535 292 6 6 chr10 64449352 64449513 -75867252 + LTR33 LTR ERVL 307 467 -54 2391 107 0 0 chr10 64449580 64449889 -75866876 - AluSx SINE Alu -3 309 1 637 182 9 27 chr10 64449898 64450008 -75866757 - FLAM_A SINE Alu -19 123 16 197 32 0 32 chr10 64450902 64450933 -75865832 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2415 91 0 7 chr10 64452403 64452711 -75864054 + AluSx SINE Alu 1 306 -6 463 18 0 0 chr10 64452827 64452883 -75863882 + AluY SINE Alu 2 57 -261 340 275 18 9 chr10 64453228 64453337 -75863428 + MIR SINE MIR 104 213 -49 1454 154 56 56 chr10 64453890 64454195 -75862570 + AluJb SINE Alu 1 305 -7 227 313 54 35 chr10 64454663 64454785 -75861980 + MIR3 SINE MIR 14 135 -102 207 311 7 147 chr10 64454784 64455057 -75861708 + L2 LINE L2 365 599 -2715 * 2294 109 0 3 chr10 64455369 64455672 -75861093 - AluSx SINE Alu -10 302 1 390 256 34 94 chr10 64456429 64456570 -75860195 - MLT1I LTR MaLR 0 549 401 892 218 6 0 chr10 64456570 64456735 -75860030 - FRAM SINE Alu 0 166 1 390 256 34 94 chr10 64456735 64456915 -75859850 - MLT1I LTR MaLR -148 401 98 230 302 42 10 chr10 64456980 64457076 -75859689 + MLT1L LTR MaLR 172 270 -345 2145 107 20 3 chr10 64457424 64457722 -75859043 + AluSq SINE Alu 1 303 -10 2188 125 0 13 chr10 64457992 64458297 -75858468 + AluSx SINE Alu 1 301 -11 2439 77 0 0 chr10 64458297 64458597 -75858168 + AluY SINE Alu 1 300 -11 277 172 0 7 chr10 64458604 64458836 -75857929 + AluJo SINE Alu 1 302 0 21 36 0 0 chr10 64459206 64459234 -75857531 + AT_rich Low_complexity Low_complexity 1 28 0 262 155 398 29 chr10 64459736 64459839 -75856926 + MIR SINE MIR 108 248 -14 974 224 114 0 chr10 64460409 64460664 -75856101 + HAL1 LINE L1 1189 1472 -1035 2075 99 14 11 chr10 64460666 64460948 -75855817 + AluSq SINE Alu 1 283 -30 255 61 0 0 chr10 64460953 64460986 -75855779 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 1947 115 4 0 chr10 64460991 64461270 -75855495 - L1M2 LINE L1 -612 5688 5409 2507 67 0 0 chr10 64461785 64462083 -75854682 + AluY SINE Alu 1 298 -13 1978 141 3 3 chr10 64462092 64462416 -75854349 + AluSx SINE Alu 1 312 0 310 189 161 70 chr10 64462575 64462718 -75854047 + L1MC4 LINE L1 7864 8019 -23 1218 76 0 0 chr10 64462982 64463140 -75853625 + L1PA8 LINE L1 5949 6106 -66 928 101 0 0 chr10 64463323 64463442 -75853323 + AluSg/x SINE Alu 177 295 -17 240 200 0 0 chr10 64463491 64463566 -75853199 + (TA)n Simple_repeat Simple_repeat 1 75 0 487 276 80 25 chr10 64464069 64464232 -75852533 - MIR3 SINE MIR -18 190 19 346 324 44 55 chr10 64464750 64464932 -75851833 - MIR3 SINE MIR -25 183 4 1030 217 16 16 chr10 64466318 64466562 -75850203 + MIR SINE MIR 14 257 -5 695 296 68 35 chr10 64466627 64466995 -75849770 + MLT1K LTR MaLR 152 531 -57 400 300 31 31 chr10 64467254 64467384 -75849381 + MIR3 SINE MIR 78 207 -1 2112 117 3 0 chr10 64467565 64467864 -75848901 - AluSx SINE Alu -12 300 1 1869 150 0 18 chr10 64468479 64468789 -75847976 + AluSx SINE Alu 1 305 0 2194 116 3 0 chr10 64469064 64469358 -75847407 + AluSx SINE Alu 1 295 -17 530 273 8 0 chr10 64469365 64469486 -75847279 - MIR SINE MIR -139 123 2 2527 129 5 27 chr10 64469831 64470203 -75846562 - THE1B LTR MaLR 0 364 1 12390 76 3 0 chr10 64470203 64471749 -75845016 - THE1B-int LTR MaLR 0 1580 31 276 30 0 0 chr10 64472131 64472164 -75844601 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 90 0 0 chr10 64472165 64472232 -75844533 + (GA)n Simple_repeat Simple_repeat 2 68 0 2343 109 0 3 chr10 64472585 64472898 -75843867 - AluSx SINE Alu 0 312 1 1973 140 7 7 chr10 64473052 64473345 -75843420 - AluJb SINE Alu -19 293 1 240 200 0 0 chr10 64474422 64474497 -75842268 + (TA)n Simple_repeat Simple_repeat 1 75 0 2245 108 0 3 chr10 64474546 64474842 -75841923 - AluSx SINE Alu -17 295 1 353 262 107 48 chr10 64474938 64475106 -75841659 - MIR3 SINE MIR -15 193 16 785 204 0 0 chr10 64475750 64475882 -75840883 + FLAM_A SINE Alu 2 133 0 242 194 0 32 chr10 64476055 64476117 -75840648 + (TA)n Simple_repeat Simple_repeat 1 60 0 515 270 81 26 chr10 64476939 64477321 -75839444 - LTR33A LTR ERVL 0 523 62 264 253 103 11 chr10 64478212 64478299 -75838466 + L2 LINE L2 3168 3262 -10 2353 93 3 10 chr10 64478381 64478691 -75838074 - AluSx SINE Alu -4 308 1 2144 129 10 0 chr10 64478738 64479048 -75837717 + AluSp SINE Alu 1 313 0 1275 196 25 97 chr10 64479073 64479435 -75837330 + MLT2D LTR ERVL 1 336 -78 2003 138 6 22 chr10 64479442 64479753 -75837012 - AluSx SINE Alu -6 306 1 26 45 0 45 chr10 64479813 64479879 -75836886 + AT_rich Low_complexity Low_complexity 1 63 0 246 62 0 0 chr10 64479992 64480024 -75836741 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 167 0 0 chr10 64480132 64480168 -75836597 + G-rich Low_complexity Low_complexity 1 36 0 5478 69 62 6 chr10 64480172 64480898 -75835867 - LTR17 LTR ERV1 -13 767 1 2426 220 52 88 chr10 64480898 64481502 -75835263 + L1MC5 LINE L1 6890 7515 -446 1118 161 0 12 chr10 64481502 64481670 -75835095 + FRAM SINE Alu 1 166 0 2426 220 52 88 chr10 64481670 64481804 -75834961 + L1MC5 LINE L1 7515 7652 -309 1896 164 3 14 chr10 64481804 64482097 -75834668 + AluJo SINE Alu 2 291 -21 2426 220 52 88 chr10 64482097 64482365 -75834400 + L1MC5 LINE L1 7652 7860 -101 2510 71 3 0 chr10 64483896 64484205 -75832560 - AluY SINE Alu 0 311 2 443 275 16 85 chr10 64485159 64485218 -75831547 - MER5A DNA MER1_type -7 182 121 2323 80 0 3 chr10 64485218 64485507 -75831258 + AluSg1 SINE Alu 1 288 -21 443 275 16 85 chr10 64485507 64485636 -75831129 - MER5A DNA MER1_type -68 121 7 568 271 112 54 chr10 64485992 64486343 -75830422 + MLT1I LTR MaLR 38 407 -2 1416 214 49 41 chr10 64487896 64488241 -75828524 - LTR16C LTR ERVL 0 491 144 3884 186 122 3 chr10 64488288 64489026 -75827739 + LTR1B LTR ERV1 1 826 0 1112 257 116 47 chr10 64489110 64489749 -75827016 + L1ME4a LINE L1 5382 6064 -57 1793 175 10 0 chr10 64489848 64490139 -75826626 + AluJb SINE Alu 1 294 -18 209 236 42 42 chr10 64490565 64490637 -75826128 - MIR SINE MIR -73 189 118 196 219 0 0 chr10 64490806 64490847 -75825918 + MIR SINE MIR 114 154 -108 1036 233 0 0 chr10 64490861 64491050 -75825715 - MER5A DNA MER1_type 0 189 1 1720 164 39 39 chr10 64491174 64491486 -75825279 - AluJb SINE Alu 0 312 1 2013 156 0 3 chr10 64491984 64492291 -75824474 + AluJb SINE Alu 1 306 -6 2557 56 0 7 chr10 64493229 64493531 -75823234 - AluY SINE Alu -11 300 1 792 180 0 0 chr10 64494748 64494876 -75821889 + FLAM_C SINE Alu 1 128 -5 195 100 0 0 chr10 64495035 64495065 -75821700 + (CAATT)n Simple_repeat Simple_repeat 4 33 0 1345 231 83 57 chr10 64495286 64495885 -75820880 + L1ME1 LINE L1 5333 6202 -132 3297 69 20 2 chr10 64495885 64496290 -75820475 - L1PA7 LINE L1 0 6154 5743 1345 231 83 57 chr10 64496290 64496427 -75820338 + L1ME1 LINE L1 6202 6334 0 537 302 111 9 chr10 64496628 64496853 -75819912 + MIR SINE MIR 15 262 0 252 0 0 0 chr10 64497633 64497661 -75819104 + (TG)n Simple_repeat Simple_repeat 2 29 0 2219 122 0 10 chr10 64498326 64498638 -75818127 + AluSx SINE Alu 1 309 -3 249 262 119 71 chr10 64498767 64498893 -75817872 + MIR3 SINE MIR 38 169 -39 269 281 21 31 chr10 64499087 64499183 -75817582 + HAL1 LINE L1 28 122 -2385 1174 272 31 70 chr10 64499299 64499507 -75817258 + HAL1 LINE L1 131 346 -2161 2166 106 3 3 chr10 64499507 64499799 -75816966 + AluSx SINE Alu 3 294 -18 1174 272 31 70 chr10 64499799 64499815 -75816950 + HAL1 LINE L1 346 361 -2146 1578 182 55 7 chr10 64499815 64499929 -75816836 + AluJb SINE Alu 6 113 -199 396 0 0 0 chr10 64499929 64499973 -75816792 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 1578 182 55 7 chr10 64499973 64500149 -75816616 + AluJb SINE Alu 113 310 -2 1174 272 31 70 chr10 64500149 64500434 -75816331 + HAL1 LINE L1 361 621 -1886 552 206 62 14 chr10 64500444 64500590 -75816175 + HAL1 LINE L1 1725 1877 -630 1126 300 52 23 chr10 64501021 64501624 -75815141 - L1ME3A LINE L1 -287 5883 5264 239 280 21 0 chr10 64501738 64501831 -75814934 - L1ME2 LINE L1 0 6164 6070 706 196 18 0 chr10 64501854 64501995 -75814770 - FLAM_A SINE Alu 0 143 1 311 254 118 82 chr10 64501995 64502385 -75814380 - L1ME3A LINE L1 -966 5180 4777 485 213 49 0 chr10 64502524 64502646 -75814119 - MER39 LTR ERV1 -25 682 555 6743 223 8 13 chr10 64502833 64504486 -75812279 - L1PA12 LINE L1 -2991 4593 2948 4350 222 39 17 chr10 64504483 64505406 -75811359 - L1PA12 LINE L1 -6633 948 6 * 4019 193 39 16 chr10 64505412 64506303 -75810462 - L1 LINE L1 -3014 4551 3640 1959 167 0 0 chr10 64506341 64506635 -75810130 - AluSx SINE Alu -18 294 1 253 213 160 53 chr10 64506635 64506718 -75810047 - L1 LINE L1 -7469 96 1 606 270 162 51 chr10 64506768 64507274 -75809491 - HAL1 LINE L1 -822 1685 1072 588 222 0 0 chr10 64507274 64507391 -75809374 - L1PB4 LINE L1 -3 6153 6037 606 270 162 51 chr10 64507391 64507614 -75809151 - HAL1 LINE L1 -1435 1072 875 321 324 92 17 chr10 64507953 64508126 -75808639 - MIR SINE MIR -59 203 18 41 0 0 0 chr10 64510139 64510180 -75806585 + AT_rich Low_complexity Low_complexity 1 41 0 1875 132 44 0 chr10 64510361 64510634 -75806131 + AluSq SINE Alu 7 291 -22 275 273 121 0 chr10 64510697 64510763 -75806002 - Charlie8 DNA MER1_type -1000 1417 1344 1150 217 109 22 chr10 64510779 64511092 -75805673 - MER2 DNA MER2_type -5 340 1 391 234 0 117 chr10 64511094 64511222 -75805543 - Charlie8 DNA MER1_type -2153 264 152 2327 88 0 13 chr10 64511233 64511541 -75805224 - AluSx SINE Alu -8 304 1 233 250 66 13 chr10 64513028 64513104 -75803661 - MLT1K LTR MaLR 0 588 509 411 308 19 0 chr10 64513524 64513631 -75803134 - MER5A DNA MER1_type -77 112 4 268 309 40 60 chr10 64513641 64513790 -75802975 + MLT1K LTR MaLR 8 153 -435 310 258 0 0 chr10 64513833 64513895 -75802870 + L2 LINE L2 3248 3309 -4 1893 155 0 0 chr10 64513931 64514235 -75802530 + AluJb SINE Alu 1 304 0 446 289 74 66 chr10 64514349 64514399 -75802366 + MLT1L LTR MaLR 370 418 -197 2292 99 0 3 chr10 64514399 64514702 -75802063 + AluSg1 SINE Alu 1 302 -7 2373 89 3 9 chr10 64514710 64515025 -75801740 + AluSq SINE Alu 1 313 0 446 289 74 66 chr10 64515025 64515207 -75801558 + MLT1L LTR MaLR 424 613 -2 210 326 29 117 chr10 64515911 64516331 -75800434 + L2 LINE L2 2811 3193 -79 509 313 25 12 chr10 64518470 64518633 -75798132 + MIR3 SINE MIR 30 194 -14 470 253 89 59 chr10 64518852 64518981 -75797784 - Charlie8 DNA MER1_type -65 276 135 2297 110 0 3 chr10 64518981 64519290 -75797475 - AluSx SINE Alu -4 308 1 470 253 89 59 chr10 64519290 64519397 -75797368 - Charlie8 DNA MER1_type -206 135 33 21 0 0 0 chr10 64519672 64519693 -75797072 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 64519748 64519770 -75796995 + AT_rich Low_complexity Low_complexity 1 22 0 2284 79 0 0 chr10 64520113 64520420 -75796345 + AluY SINE Alu 1 307 0 283 183 323 11 chr10 64520841 64520934 -75795831 + MER34 LTR ERV1 1 122 -420 * 1465 230 43 41 chr10 64520910 64521349 -75795416 + MER39 LTR ERV1 259 698 -9 492 263 80 80 chr10 64521634 64521973 -75794792 - MLT1I LTR MaLR 0 409 71 1513 169 0 94 chr10 64522233 64522553 -75794212 - AluJb SINE Alu -22 290 1 782 268 82 60 chr10 64522741 64523238 -75793527 + MLT1J LTR MaLR 3 510 -1 271 318 15 0 chr10 64524442 64524508 -75792257 - MIR SINE MIR -192 70 4 1593 233 110 30 chr10 64525356 64525858 -75790907 - MLT1F LTR MaLR 0 542 1 1064 177 101 5 chr10 64526153 64526248 -75790517 - AluJo SINE Alu -83 229 144 477 0 0 0 chr10 64526248 64526301 -75790464 + (TG)n Simple_repeat Simple_repeat 2 54 0 1064 177 101 5 chr10 64526301 64526414 -75790351 - AluJo SINE Alu -168 144 1 1848 162 14 3 chr10 64526445 64526741 -75790024 + AluJo SINE Alu 1 299 -13 2216 111 3 0 chr10 64527663 64527970 -75788795 + AluSx SINE Alu 1 308 -4 197 0 71 0 chr10 64528028 64528056 -75788709 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 305 68 0 0 chr10 64528072 64528116 -75788649 - L1M3 LINE L1 -813 5521 5478 499 240 29 10 chr10 64528261 64528365 -75788400 + MLT1A1 LTR MaLR 180 285 -80 992 313 35 6 chr10 64528371 64528710 -75788055 + L1M2 LINE L1 102 450 -6399 1429 201 0 43 chr10 64529180 64529483 -75787282 + L1PA15-16 LINE L1 444 733 -6116 5747 231 49 16 chr10 64529938 64532020 -75784745 + L1PA15-16 LINE L1 1429 3624 -3225 260 202 32 128 chr10 64532316 64532344 -75784421 + MIR SINE MIR 124 153 -109 2383 86 0 13 chr10 64532344 64532658 -75784107 + AluSq SINE Alu 1 310 -3 260 202 32 128 chr10 64532658 64532723 -75784042 + MIR SINE MIR 153 208 -54 466 232 120 77 chr10 64533452 64533711 -75783054 + MER51A LTR ERV1 328 597 -37 * 620 137 0 57 chr10 64533710 64533834 -75782931 + MER51C LTR ERV1 522 638 -2 1785 157 11 0 chr10 64533864 64534174 -75782591 - AluJo SINE Alu 0 313 1 206 268 82 62 chr10 64534217 64534314 -75782451 - L2 LINE L2 -46 3267 3169 520 171 44 171 chr10 64534397 64534504 -75782261 + L1MA4 LINE L1 6029 6148 -152 2184 106 3 0 chr10 64534504 64534813 -75781952 + AluSx SINE Alu 1 310 0 520 171 44 171 chr10 64534813 64534833 -75781932 + L1MA4 LINE L1 6148 6169 -131 197 32 0 32 chr10 64534833 64534864 -75781901 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 520 171 44 171 chr10 64534864 64534986 -75781779 + L1MA4 LINE L1 6169 6248 -52 192 245 41 0 chr10 64535024 64535073 -75781692 - L2 LINE L2 -203 3069 3019 245 277 61 68 chr10 64535413 64535561 -75781204 - L1ME LINE L1 -399 5722 5576 272 304 35 92 chr10 64535583 64535843 -75780922 + MIR SINE MIR 18 262 0 283 321 55 18 chr10 64536011 64536120 -75780645 - MIR3 SINE MIR -93 115 3 618 252 56 88 chr10 64536128 64536378 -75780387 + MIR SINE MIR 2 243 -19 2117 111 7 20 chr10 64536749 64537067 -75779698 + AluSx SINE Alu 1 312 0 1940 162 0 3 chr10 64537861 64538157 -75778608 + AluJo SINE Alu 1 295 -17 272 140 0 18 chr10 64538734 64538791 -75777974 + (TTCTC)n Simple_repeat Simple_repeat 1 56 0 1277 184 137 26 chr10 64538791 64539062 -75777703 - AluJo SINE Alu 0 302 2 504 228 121 11 chr10 64539065 64539248 -75777517 + MLT1J LTR MaLR 8 172 -278 1046 192 18 41 chr10 64539448 64539667 -75777098 - AluJo SINE Alu -14 298 85 673 346 107 28 chr10 64539844 64540579 -75776186 - L2 LINE L2 0 3272 2470 314 262 48 39 chr10 64540769 64540872 -75775893 + L2 LINE L2 3142 3245 -27 343 318 32 19 chr10 64541909 64542063 -75774702 - MIR SINE MIR -55 207 52 1039 322 64 8 chr10 64542145 64542533 -75774232 - MLT1K LTR MaLR -110 478 69 645 306 70 0 chr10 64542587 64542786 -75773979 + LTR33 LTR ERVL 1 213 -308 410 258 68 23 chr10 64542906 64543038 -75773727 + LTR33 LTR ERVL 384 521 0 692 281 158 38 chr10 64543070 64543412 -75773353 + L3 LINE CR1 1169 1551 -26 1302 184 28 0 chr10 64544669 64544887 -75771878 - MER58A DNA MER1_type 0 224 1 302 215 130 75 chr10 64545009 64545226 -75771539 + MIR SINE MIR 1 218 -44 2098 180 91 35 chr10 64545634 64546094 -75770671 - MER66B LTR ERV1 0 486 1 324 276 80 9 chr10 64546094 64546281 -75770484 + L3 LINE CR1 1249 1503 -74 726 308 12 36 chr10 64546471 64546724 -75770041 - MIR SINE MIR 0 262 16 5823 72 36 1 chr10 64547060 64547800 -75768965 + MER4E LTR ERV1 1 766 0 559 210 98 24 chr10 64548346 64548512 -75768253 + MIR3 SINE MIR 21 201 -7 4202 160 40 15 chr10 64548812 64549555 -75767210 - L1MB5 LINE L1 0 6174 5413 1867 184 0 0 chr10 64549779 64550073 -75766692 - AluJb SINE Alu -18 294 1 1815 218 25 46 chr10 64550780 64551257 -75765508 + LTR37B LTR ERV1 2 468 0 328 148 0 0 chr10 64552976 64553030 -75763735 - MIR SINE MIR -5 257 204 240 185 94 14 chr10 64553337 64553407 -75763358 - MIR SINE MIR -77 131 56 2932 102 3 0 chr10 64553465 64553838 -75762927 - THE1C LTR MaLR 0 375 2 2225 113 0 3 chr10 64554592 64554894 -75761871 - AluSx SINE Alu -11 301 1 512 242 56 19 chr10 64554972 64555133 -75761632 + HAL1b LINE L1 1193 6121 0 3627 123 24 4 chr10 64555468 64555979 -75760786 - MER1A DNA MER1_type -6 523 3 3052 61 2 23 chr10 64556030 64556425 -75760340 + L1PA5 LINE L1 5768 6154 0 602 160 19 0 chr10 64556430 64556536 -75760229 + AluSg/x SINE Alu 205 312 0 1244 186 0 62 chr10 64556682 64556961 -75759804 - AluJb SINE Alu 0 303 41 284 320 74 65 chr10 64557057 64557382 -75759383 + MLT1K LTR MaLR 147 474 -114 1374 127 33 0 chr10 64557647 64557882 -75758883 - AluSg/x SINE Alu 0 306 65 192 77 0 0 chr10 64558031 64558057 -75758708 + (GGA)n Simple_repeat Simple_repeat 2 27 0 309 275 55 37 chr10 64558160 64558269 -75758496 + Charlie8 DNA MER1_type 7 117 -2300 254 213 0 0 chr10 64558291 64558338 -75758427 - MIR SINE MIR -37 225 179 693 294 108 0 chr10 64558343 64558547 -75758218 - MIR SINE MIR -10 252 27 668 290 0 0 chr10 64558997 64559128 -75757637 + FAM SINE Alu 1 131 -54 559 98 0 0 chr10 64559127 64559209 -75757556 + FAM SINE Alu 101 182 -3 * 4714 166 36 13 chr10 64559212 64559284 -75757481 + L1MB4 LINE L1 5198 5267 -913 2416 80 0 3 chr10 64559284 64559585 -75757180 + AluY SINE Alu 1 300 -11 4714 166 36 13 chr10 64559585 64560468 -75756297 + L1MB4 LINE L1 5267 6174 -6 562 273 60 0 chr10 64561187 64561337 -75755428 + MIR3 SINE MIR 42 200 -8 213 221 59 44 chr10 64562512 64562580 -75754185 - L2 LINE L2 0 3313 3245 1630 163 7 35 chr10 64562620 64562909 -75753856 + AluJo SINE Alu 21 301 -11 180 0 0 0 chr10 64563622 64563642 -75753123 + (A)n Simple_repeat Simple_repeat 1 20 0 7222 168 8 5 chr10 64564057 64565352 -75751413 + L1PA13 LINE L1 3111 4409 -1737 5436 85 27 50 chr10 64565359 64565385 -75751380 + SVA Other Other 1 868 -520 5436 83 23 56 chr10 64565385 64566619 -75750146 + SVA Other Other 1 868 -520 1030 56 92 36 chr10 64566936 64567131 -75749634 + SVA Other Other 661 866 -520 6528 66 9 52 chr10 64567246 64568236 -75748529 + SVA Other Other 433 1379 -7 5534 134 14 26 chr10 64568249 64569668 -75747097 + L1PA13 LINE L1 4398 5812 -351 2490 89 0 0 chr10 64569668 64569972 -75746793 + AluSg SINE Alu 1 304 -6 5534 134 14 26 chr10 64569972 64570320 -75746445 + L1PA13 LINE L1 5812 6163 0 9731 158 25 2 chr10 64570337 64570741 -75746024 + L1MA2 LINE L1 3126 3519 -2785 216 86 0 0 chr10 64570741 64570776 -75745989 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 9731 158 25 2 chr10 64570776 64573372 -75743393 + L1MA2 LINE L1 3519 6304 0 226 241 76 110 chr10 64574494 64574532 -75742233 + HAL1b LINE L1 765 803 -545 1161 155 0 12 chr10 64574532 64574700 -75742065 + FRAM SINE Alu 1 166 0 226 241 76 110 chr10 64574700 64574806 -75741959 + HAL1b LINE L1 803 904 -444 470 283 0 14 chr10 64575164 64575302 -75741463 + MLT1F LTR MaLR 1 136 -406 1915 125 32 4 chr10 64575302 64575604 -75741161 - AluJb SINE Alu 0 312 1 21 0 0 0 chr10 64575989 64576010 -75740755 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 64576065 64576087 -75740678 + AT_rich Low_complexity Low_complexity 1 22 0 2271 82 0 0 chr10 64576429 64576736 -75740029 + AluY SINE Alu 1 307 0 283 183 323 11 chr10 64577157 64577250 -75739515 + MER34 LTR ERV1 1 122 -420 * 1360 239 46 43 chr10 64577226 64577665 -75739100 + MER39 LTR ERV1 259 698 -9 492 263 80 80 chr10 64577950 64578289 -75738476 - MLT1I LTR MaLR 0 409 71 1537 171 0 82 chr10 64578549 64578865 -75737900 - AluJb SINE Alu -22 290 1 782 268 82 60 chr10 64579053 64579550 -75737215 + MLT1J LTR MaLR 3 510 -1 271 318 15 0 chr10 64580754 64580820 -75735945 - MIR SINE MIR -192 70 4 1593 233 110 30 chr10 64581668 64582170 -75734595 - MLT1F LTR MaLR 0 542 1 567 223 137 29 chr10 64583143 64583318 -75733447 - MIR SINE MIR -5 257 64 1902 121 37 0 chr10 64583411 64583716 -75733049 + AluSx SINE Alu 1 315 0 7636 34 25 0 chr10 64583907 64585174 -75731591 - L1PA4 LINE L1 -2 6153 4873 265 247 12 25 chr10 64585174 64585255 -75731510 + MER58B DNA MER1_type 77 156 -185 9664 182 27 10 chr10 64585261 64585816 -75730949 - L1PA16 LINE L1 -2 6164 5620 1760 199 3 3 chr10 64585816 64586127 -75730638 - AluJo SINE Alu -1 311 1 9664 182 27 10 chr10 64586127 64586241 -75730524 - L1PA16 LINE L1 -546 5620 5509 2307 98 0 3 chr10 64586241 64586537 -75730228 - AluSg1 SINE Alu -11 298 4 9664 182 27 10 chr10 64586537 64587402 -75729363 - L1PA16 LINE L1 -657 5509 4660 1856 149 48 7 chr10 64587402 64587697 -75729068 + AluSx SINE Alu 1 307 -5 9664 182 27 10 chr10 64587697 64589132 -75727633 - L1PA16 LINE L1 -1506 4660 3140 979 198 34 0 chr10 64589141 64589318 -75727447 + MER58B DNA MER1_type 159 341 0 2206 83 7 20 chr10 64590132 64590432 -75726333 + AluSx SINE Alu 1 296 -16 523 184 51 0 chr10 64590432 64590530 -75726235 - L1ME3A LINE L1 -8 6162 6060 1347 220 43 46 chr10 64590662 64591049 -75725716 - L1MA7 LINE L1 -401 5769 5452 2663 141 33 21 chr10 64591061 64591488 -75725277 - MSTB1 LTR MaLR 0 432 1 1719 189 58 52 chr10 64591716 64592098 -75724667 + MLT1B LTR MaLR 4 387 -3 235 245 20 0 chr10 64592103 64592152 -75724613 - L2 LINE L2 -33 3239 3190 254 260 20 30 chr10 64592408 64592508 -75724257 + HsTC2 DNA Tc2 3 101 -1797 585 309 59 31 chr10 64592509 64592797 -75723968 - L1MEd LINE L1 -5473 646 351 190 384 107 50 chr10 64592942 64593101 -75723664 + L2 LINE L2 3075 3242 -30 1598 187 16 29 chr10 64593122 64593255 -75723510 + AluJo SINE Alu 7 140 -172 2378 64 3 14 chr10 64593255 64593570 -75723195 + AluSp SINE Alu 6 298 -15 1368 176 12 106 chr10 64593386 64593541 -75723224 + AluJo SINE Alu 3 112 -190 180 0 0 0 chr10 64593541 64593561 -75723204 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1368 176 12 106 chr10 64593561 64593735 -75723030 + AluJo SINE Alu 112 301 -1 1598 187 16 29 chr10 64593570 64593746 -75723019 + AluJo SINE Alu 140 312 0 227 192 0 0 chr10 64594746 64594798 -75721967 + (TA)n Simple_repeat Simple_repeat 1 52 0 1322 282 96 53 chr10 64595175 64595327 -75721438 + L1MC/D LINE L1 4477 4621 -1951 1679 172 0 3 chr10 64595327 64595618 -75721147 - AluSg SINE Alu -18 292 3 1322 282 96 53 chr10 64595618 64596749 -75720016 + L1MC/D LINE L1 4621 5823 -749 2045 106 22 0 chr10 64597043 64597340 -75719425 - AluSg1 SINE Alu 0 303 1 5523 140 3 5 chr10 64597395 64598769 -75717996 - L1PA16 LINE L1 -15 6151 4758 822 154 19 19 chr10 64598773 64598929 -75717836 - AluSg/x SINE Alu -28 281 126 284 172 17 0 chr10 64599062 64599120 -75717645 + MER53 DNA DNA 131 189 0 458 139 0 0 chr10 64599126 64599198 -75717567 + MIR SINE MIR 73 144 -118 1466 200 154 6 chr10 64599894 64600239 -75716526 - MSTD LTR MaLR 0 396 1 2679 36 3 0 chr10 64600868 64601174 -75715591 + AluY SINE Alu 1 307 -4 241 217 155 62 chr10 64601222 64601351 -75715414 + LTR33 LTR ERVL 19 159 -362 394 259 54 0 chr10 64601466 64601578 -75715187 + LTR33 LTR ERVL 347 464 -57 28 0 0 0 chr10 64601998 64602026 -75714739 + AT_rich Low_complexity Low_complexity 1 28 0 6470 47 20 9 chr10 64602026 64602838 -75713927 - L1PA7 LINE L1 -1 6153 5333 6401 80 2 0 chr10 64602959 64603762 -75713003 + THE1B-int LTR MaLR 776 1580 0 2527 129 5 27 chr10 64603762 64604134 -75712631 + THE1B LTR MaLR 1 364 0 530 273 8 0 chr10 64604479 64604600 -75712165 + MIR SINE MIR 2 123 -139 2136 113 3 3 chr10 64604607 64604900 -75711865 - AluSx SINE Alu -17 295 3 2091 121 95 20 chr10 64605605 64605952 -75710813 + THE1C LTR MaLR 1 373 -2 8608 142 20 25 chr10 64606572 64607971 -75708794 + Ricksha_c DNA DNA 10 1401 -645 300 296 138 21 chr10 64608235 64608424 -75708341 - MIR SINE MIR -40 222 12 1416 151 5 0 chr10 64608613 64608825 -75707940 - AluJb SINE Alu -99 213 1 3395 177 37 4 chr10 64609673 64610888 -75705877 - L1 LINE L1 -3255 4310 3056 1759 98 0 0 chr10 64611007 64611232 -75705533 + AluSc SINE Alu 65 289 -20 494 70 14 0 chr10 64611232 64611303 -75705462 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 301 312 48 11 chr10 64611512 64611701 -75705064 - L1ME2 LINE L1 -220 5944 5749 183 42 0 0 chr10 64611787 64611811 -75704954 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 478 231 37 8 chr10 64613479 64613613 -75703152 + MER2 DNA MER2_type 1 138 -207 3366 148 13 19 chr10 64613868 64614688 -75702077 - L1P5 LINE L1 -407 5744 4929 330 304 36 18 chr10 64615081 64615193 -75701572 - MER91B DNA MER1_type -67 123 10 2075 116 48 0 chr10 64615299 64615593 -75701172 + AluSx SINE Alu 1 308 -4 1081 114 12 18 chr10 64616287 64616453 -75700312 + AluSg/x SINE Alu 122 286 -26 420 304 12 12 chr10 64616829 64616997 -75699768 + C-rich Low_complexity Low_complexity 1 168 0 198 219 0 0 chr10 64617013 64617077 -75699688 + C-rich Low_complexity Low_complexity 1 64 0 350 243 29 22 chr10 64617083 64617219 -75699546 + (CCCCG)n Simple_repeat Simple_repeat 1 137 0 28 29 0 0 chr10 64617252 64617287 -75699478 + GC_rich Low_complexity Low_complexity 1 35 0 10008 36 9 0 chr10 64617499 64618729 -75698036 + L1M1 LINE L1 2910 4562 -3003 2312 220 29 77 chr10 64618865 64619873 -75696892 + L1P LINE L1 2278 3236 -2910 1710 128 0 16 chr10 64619875 64620133 -75696632 - THE1C LTR MaLR 0 375 122 235 318 39 0 chr10 64620519 64620648 -75696117 + MLT1K LTR MaLR 126 259 -329 297 311 42 0 chr10 64621638 64621757 -75695008 - L2 LINE L2 -589 2725 2602 3234 138 15 51 chr10 64621794 64622404 -75694361 + L1PA16 LINE L1 5570 6157 -9 1663 176 0 8 chr10 64622553 64622820 -75693945 + AluJb SINE Alu 1 265 -47 1080 282 190 10 chr10 64623418 64623981 -75692784 - L1ME3A LINE L1 -219 5951 5293 518 249 35 56 chr10 64624412 64624609 -75692156 - MER117 DNA MER1_type -1 196 4 4272 209 29 12 chr10 64625368 64626346 -75690419 - L1P LINE L1 -1008 5138 4145 4427 167 24 36 chr10 64626657 64627548 -75689217 + MER11C LTR ERVK 192 1071 0 1290 92 82 38 chr10 64627548 64627788 -75688977 + L1PA10 LINE L1 5161 5406 -750 243 0 0 0 chr10 64627942 64627969 -75688796 + (T)n Simple_repeat Simple_repeat 1 27 0 30 0 0 0 chr10 64627983 64628013 -75688752 + GC_rich Low_complexity Low_complexity 1 30 0 238 156 0 0 chr10 64628023 64628055 -75688710 + A-rich Low_complexity Low_complexity 1 32 0 228 35 0 0 chr10 64628072 64628101 -75688664 + (T)n Simple_repeat Simple_repeat 1 29 0 3352 100 2 5 chr10 64628102 64628666 -75688099 + L1PA10 LINE L1 5456 6155 -13 993 176 0 24 chr10 64629633 64629803 -75686962 - FRAM SINE Alu 0 166 1 12252 155 23 18 chr10 64629946 64633281 -75683484 + L1MA2 LINE L1 2954 6304 0 1463 267 34 18 chr10 64633294 64633800 -75682965 + Charlie7 DNA MER1_type 1839 2352 -260 1162 123 70 11 chr10 64633840 64634025 -75682740 - Tigger3(Golem) DNA MER2_type -682 2347 2152 6029 120 52 91 chr10 64634025 64634384 -75682381 + Tigger3b DNA MER2_type 3 374 -2654 2186 111 0 10 chr10 64634384 64634681 -75682084 - AluSx SINE Alu -18 294 1 6029 120 52 91 chr10 64634681 64635260 -75681505 + Tigger3b DNA MER2_type 374 884 -2144 2333 97 0 0 chr10 64635260 64635550 -75681215 - AluSg SINE Alu -20 290 1 6029 120 52 91 chr10 64635550 64635859 -75680906 + Tigger3b DNA MER2_type 884 1203 -28 207 147 27 0 chr10 64636326 64636368 -75680397 + MIR SINE MIR 100 144 -64 821 80 35 0 chr10 64636380 64636493 -75680272 - AluSg/x SINE Alu -17 293 177 226 293 243 21 chr10 64637176 64637316 -75679449 - MIR3 SINE MIR -5 203 33 1861 89 41 33 chr10 64637897 64638167 -75678598 - L1PA11 LINE L1 0 6174 5903 421 302 58 6 chr10 64638354 64638526 -75678239 + MIR SINE MIR 67 247 -15 255 188 136 3 chr10 64638745 64638966 -75677799 - L1ME3A LINE L1 -224 5946 5674 427 245 250 5 chr10 64639503 64639719 -75677046 - L1ME4a LINE L1 -4 6117 5849 1705 236 71 54 chr10 64641984 64642378 -75674387 - MLT1F LTR MaLR 0 542 135 1873 123 30 4 chr10 64642378 64642669 -75674096 + AluJb SINE Alu 13 312 0 1705 236 71 54 chr10 64642669 64642807 -75673958 - MLT1F LTR MaLR -407 135 1 226 241 76 110 chr10 64643165 64643271 -75673494 - HAL1b LINE L1 -444 904 803 1161 155 0 12 chr10 64643271 64643439 -75673326 - FRAM SINE Alu 0 166 1 226 241 76 110 chr10 64643439 64643477 -75673288 - HAL1b LINE L1 -545 803 765 9780 176 34 3 chr10 64644024 64646620 -75670145 - L1MA2 LINE L1 0 7723 4937 216 86 0 0 chr10 64646620 64646655 -75670110 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 9780 176 34 3 chr10 64646655 64647104 -75669661 - L1MA2 LINE L1 -2786 4937 4503 * 19341 178 9 20 chr10 64647081 64647429 -75669336 - L1PA13 LINE L1 0 7582 7232 2487 89 0 0 chr10 64647429 64647733 -75669032 - AluSg SINE Alu -6 304 1 19341 178 9 20 chr10 64647733 64649160 -75667605 - L1PA13 LINE L1 -350 7232 5790 9930 28 2 204 chr10 64649160 64650894 -75665871 - SVA Other Other 0 1386 4 19341 178 9 20 chr10 64650894 64653826 -75662939 - L1PA13 LINE L1 -1792 5790 2929 4363 222 39 17 chr10 64653823 64654746 -75662019 - L1PA13 LINE L1 -6633 948 6 * 4021 194 39 16 chr10 64654752 64655643 -75661122 - L1MA2 LINE L1 -3014 4551 3640 1984 166 0 0 chr10 64655681 64655976 -75660789 - AluSx SINE Alu -17 295 1 256 170 170 64 chr10 64655976 64656059 -75660706 - L1MA2 LINE L1 -7469 96 1 642 267 162 51 chr10 64656109 64656615 -75660150 - HAL1 LINE L1 -822 1685 1072 588 222 0 0 chr10 64656615 64656732 -75660033 - L1PB4 LINE L1 -3 6153 6037 642 267 162 51 chr10 64656732 64656955 -75659810 - HAL1 LINE L1 -1435 1072 875 321 324 92 17 chr10 64657293 64657466 -75659299 - MIR SINE MIR -59 203 18 41 0 0 0 chr10 64659481 64659522 -75657243 + AT_rich Low_complexity Low_complexity 1 41 0 1929 130 42 7 chr10 64659703 64659987 -75656778 + AluSx SINE Alu 7 300 -12 485 239 44 0 chr10 64661259 64661372 -75655393 - MER103 DNA DNA -47 119 2 5805 152 72 9 chr10 64661601 64662780 -75653985 + L1MA9 LINE L1 4507 5832 -480 387 0 0 0 chr10 64662780 64662823 -75653942 + (CA)n Simple_repeat Simple_repeat 2 44 0 5805 152 72 9 chr10 64662823 64663323 -75653442 + L1MA9 LINE L1 5832 6299 -13 324 143 0 0 chr10 64663573 64663629 -75653136 + (GA)n Simple_repeat Simple_repeat 1 56 0 346 229 81 47 chr10 64663652 64663804 -75652961 + MLT1J2 LTR MaLR 303 409 0 494 300 172 0 chr10 64663857 64664037 -75652728 - MIR SINE MIR -3 259 49 2216 126 0 0 chr10 64664465 64664767 -75651998 + AluSx SINE Alu 1 302 -10 210 118 0 0 chr10 64664965 64664999 -75651766 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1189 233 89 143 chr10 64665093 64665386 -75651379 + L1MC4 LINE L1 6815 7122 -920 2342 115 32 29 chr10 64665386 64665760 -75651005 - THE1C LTR MaLR 0 375 1 1189 233 89 143 chr10 64665760 64666638 -75650127 + L1MC4 LINE L1 7122 7920 -122 474 18 0 0 chr10 64666638 64666693 -75650072 + (TA)n Simple_repeat Simple_repeat 1 55 0 1189 233 89 143 chr10 64666693 64666741 -75650024 + L1MC4 LINE L1 7920 7969 -73 29 21 0 21 chr10 64666751 64666779 -75649986 + AT_rich Low_complexity Low_complexity 1 29 -17 2267 125 0 0 chr10 64666779 64667091 -75649674 - AluSx SINE Alu 0 312 1 29 21 0 21 chr10 64667091 64667109 -75649656 + AT_rich Low_complexity Low_complexity 29 46 0 797 250 64 0 chr10 64667204 64667408 -75649357 + MIR SINE MIR 46 262 0 2482 170 14 23 chr10 64667852 64668288 -75648477 - MSTB1 LTR MaLR 0 432 1 227 240 0 0 chr10 64668893 64668943 -75647822 + MIR SINE MIR 82 131 -131 2084 133 0 0 chr10 64668958 64669284 -75647481 + AluSx SINE Alu 1 312 0 206 278 14 14 chr10 64669685 64669757 -75647008 + (TCTCTG)n Simple_repeat Simple_repeat 6 77 0 547 265 60 113 chr10 64670262 64670662 -75646103 + MLT1J LTR MaLR 14 392 -119 628 179 14 62 chr10 64670662 64670807 -75645958 - MER31B LTR ERV1 0 466 329 822 176 8 0 chr10 64670807 64670938 -75645827 + AluJb SINE Alu 1 132 -180 994 146 24 40 chr10 64670943 64671253 -75645512 - MER31B LTR ERV1 -125 341 1 24 67 0 0 chr10 64671588 64671633 -75645132 + AT_rich Low_complexity Low_complexity 1 45 0 414 329 182 20 chr10 64671826 64672419 -75644346 + L2 LINE L2 1365 2053 -1261 824 263 41 23 chr10 64672746 64673169 -75643596 + MER90 LTR ERV1 37 603 -11 1752 98 0 0 chr10 64673357 64673581 -75643184 - AluSg/x SINE Alu 0 310 87 607 80 0 0 chr10 64673581 64673656 -75643109 + AluS SINE Alu 13 87 -226 2106 128 3 0 chr10 64674131 64674427 -75642338 - AluSg SINE Alu -10 300 4 252 0 0 0 chr10 64674429 64674457 -75642308 + (T)n Simple_repeat Simple_repeat 1 28 0 291 157 0 0 chr10 64675003 64675054 -75641711 + (CA)n Simple_repeat Simple_repeat 1 51 0 301 260 77 19 chr10 64675464 64675568 -75641197 + L2 LINE L2 3202 3311 -2 22 0 0 0 chr10 64676482 64676504 -75640261 + AT_rich Low_complexity Low_complexity 1 22 0 1573 155 18 122 chr10 64676687 64676857 -75639908 - AluJo SINE Alu 0 302 116 219 103 0 0 chr10 64676857 64676896 -75639869 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2275 62 0 4 chr10 64676896 64677168 -75639597 - AluY SINE Alu -28 283 13 1573 155 18 122 chr10 64677168 64677331 -75639434 - AluJo SINE Alu -184 118 3 348 235 62 3 chr10 64677671 64677788 -75638977 + LTR33A LTR ERVL 419 523 0 2469 127 34 8 chr10 64678139 64678494 -75638271 + THE1B LTR MaLR 1 364 0 709 299 118 18 chr10 64679137 64679475 -75637290 - L2 LINE L2 -3 3310 2939 237 33 0 0 chr10 64681072 64681102 -75635663 + (TC)n Simple_repeat Simple_repeat 1 30 0 230 359 24 75 chr10 64681109 64681404 -75635361 - L2 LINE L2 -71 3201 2922 1591 238 32 0 chr10 64681616 64681957 -75634808 + LTR16B LTR ERVL 1 352 -112 345 356 17 17 chr10 64682000 64682180 -75634585 + HERV16 LTR ERVL 4809 4988 -8 1596 259 45 18 chr10 64682191 64682592 -75634173 + LTR16B LTR ERVL 3 419 -45 3012 164 47 29 chr10 64682592 64683103 -75633662 + MLT2B1 LTR ERVL 1 520 0 1596 259 45 18 chr10 64683103 64683149 -75633616 + LTR16B LTR ERVL 419 462 -2 458 326 94 20 chr10 64683202 64683330 -75633435 - L2 LINE L2 -468 2846 2729 2114 126 0 3 chr10 64683330 64683646 -75633119 - AluSq SINE Alu 0 313 1 458 326 94 20 chr10 64683646 64683762 -75633003 - L2 LINE L2 -585 2729 2584 29 28 0 0 chr10 64683911 64683947 -75632818 + AT_rich Low_complexity Low_complexity 1 36 0 824 231 47 6 chr10 64684325 64684494 -75632271 + MER45A DNA AcHobo 1 176 -2 417 268 141 0 chr10 64684497 64684639 -75632126 - MIR SINE MIR -93 169 8 185 205 26 0 chr10 64684932 64684971 -75631794 - MER5B DNA MER1_type 0 178 139 335 329 43 19 chr10 64685070 64685231 -75631534 - L3 LINE CR1 -1350 227 63 2991 174 38 34 chr10 64685234 64685814 -75630951 + L1M1 LINE L1 13 595 -6966 4107 86 4 4 chr10 64685814 64686325 -75630440 + MER9 LTR ERVK 1 511 0 23133 61 0 1 chr10 64686329 64689114 -75627651 + HERVK9 LTR ERVK 5 2786 -3130 7526 68 7 8 chr10 64689114 64690067 -75626698 + HERVK9 LTR ERVK 3711 4662 -1254 41333 60 2 1 chr10 64690076 64696229 -75620536 - L1PA5 LINE L1 0 6154 1 2693 117 19 0 chr10 64697946 64698314 -75618451 - THE1C LTR MaLR 0 375 1 619 316 25 29 chr10 64698380 64698624 -75618141 + MIR SINE MIR 1 243 -19 390 42 0 0 chr10 64699479 64699527 -75617238 + (TG)n Simple_repeat Simple_repeat 2 49 0 201 147 0 0 chr10 64700210 64700244 -75616521 + (TG)n Simple_repeat Simple_repeat 1 34 0 698 179 133 83 chr10 64701007 64701225 -75615540 + MER106A DNA MER1_type 8 236 0 207 234 19 140 chr10 64701254 64701361 -75615404 - MIR SINE MIR -78 130 37 * 214 288 91 0 chr10 64701333 64701399 -75615366 + MIR SINE MIR 50 121 -141 1250 199 142 24 chr10 64701399 64701731 -75615034 - L1ME1 LINE L1 -138 6028 5658 2262 105 7 0 chr10 64701736 64702032 -75614733 - AluSx SINE Alu -14 298 1 388 280 66 80 chr10 64702516 64702805 -75613960 - L2 LINE L2 -797 2517 2233 701 321 60 29 chr10 64703324 64703707 -75613058 + LTR16C LTR ERVL 97 491 0 373 274 122 37 chr10 64704127 64704291 -75612474 + MER5B DNA MER1_type 1 178 0 181 217 217 11 chr10 64705436 64705528 -75611237 - MIR SINE MIR -28 234 124 772 245 46 17 chr10 64706247 64706479 -75610286 - MIR SINE MIR -12 250 1 243 331 80 53 chr10 64707503 64707654 -75609111 - L2 LINE L2 -10 3262 3108 263 356 158 20 chr10 64707778 64707980 -75608785 - L2 LINE L2 0 3272 3043 227 299 79 68 chr10 64707933 64708110 -75608655 + MER91A DNA MER1_type 18 196 0 * 3505 198 37 48 chr10 64708123 64708981 -75607784 - L1ME1 LINE L1 0 6166 5318 783 136 8 0 chr10 64709025 64709143 -75607622 - FRAM SINE Alu -11 165 47 1817 196 72 39 chr10 64709143 64709288 -75607477 - L1ME1 LINE L1 -863 5283 5144 2313 104 0 0 chr10 64709288 64709585 -75607180 - AluSx SINE Alu -1 311 15 1817 196 72 39 chr10 64709585 64709924 -75606841 - L1ME1 LINE L1 -1002 5144 4783 1709 50 0 66 chr10 64710218 64710521 -75606244 + AluY SINE Alu 1 283 -28 218 306 19 19 chr10 64711029 64711186 -75605579 + CT-rich Low_complexity Low_complexity 3 159 0 * 339 276 41 24 chr10 64711109 64711279 -75605486 + C-rich Low_complexity Low_complexity 4 176 0 369 286 50 8 chr10 64712674 64712793 -75603972 + L2 LINE L2 3184 3307 -6 484 276 114 59 chr10 64712825 64712877 -75603888 + MIR SINE MIR 16 64 -198 2928 59 35 0 chr10 64712877 64713218 -75603547 - THE1A LTR MaLR -2 353 1 484 276 114 59 chr10 64713218 64713394 -75603371 + MIR SINE MIR 64 259 -3 193 216 54 40 chr10 64713777 64713851 -75602914 + L3 LINE CR1 1069 1143 -434 2276 181 33 15 chr10 64713957 64714415 -75602350 + L1MB7 LINE L1 5710 6175 -9 315 297 16 23 chr10 64714433 64714561 -75602204 + MER5B DNA MER1_type 1 127 -51 1730 158 48 40 chr10 64714886 64715265 -75601500 - L1MA9 LINE L1 0 6312 5931 5388 84 15 0 chr10 64715265 64715987 -75600778 - L1PA14 LINE L1 -26 6135 5403 * 11338 220 43 48 chr10 64715983 64716312 -75600453 - L1MA9 LINE L1 -334 7397 7068 2250 166 12 0 chr10 64716312 64716656 -75600109 + MER7A DNA MER2_type 1 346 0 11338 220 43 48 chr10 64716656 64717446 -75599319 - L1MA9 LINE L1 -663 7068 6275 2260 107 0 3 chr10 64717446 64717745 -75599020 + AluSq SINE Alu 1 298 -15 11338 220 43 48 chr10 64717745 64721385 -75595380 - L1MA9 LINE L1 -1456 6275 2814 1470 230 62 0 chr10 64721381 64721685 -75595080 - L1MA9 LINE L1 -5632 1854 1532 * 1822 136 11 7 chr10 64722357 64722644 -75594121 + AluSx SINE Alu 25 312 0 394 351 27 18 chr10 64722810 64723032 -75593733 - MIR SINE MIR -11 251 28 282 319 104 7 chr10 64723117 64723252 -75593513 + MIR SINE MIR 81 228 -34 648 297 74 7 chr10 64723779 64724048 -75592717 - L1MC4a LINE L1 -1827 5981 5695 344 207 129 93 chr10 64724109 64724289 -75592476 - MER20B DNA MER1_type -3 216 28 1543 201 49 57 chr10 64724371 64724739 -75592026 + MLT1A1 LTR MaLR 1 365 0 263 256 64 0 chr10 64725128 64725206 -75591559 - MIR3 SINE MIR 0 208 126 340 265 42 96 chr10 64725338 64725464 -75591301 + MER5A DNA MER1_type 1 126 -61 1970 79 0 43 chr10 64725464 64725744 -75591021 - AluY SINE Alu -15 296 29 340 265 42 96 chr10 64725744 64725783 -75590982 + MER5A DNA MER1_type 126 166 -21 231 36 0 0 chr10 64726053 64726081 -75590684 + (A)n Simple_repeat Simple_repeat 1 28 0 259 253 190 68 chr10 64726573 64726957 -75589808 + LTR33 LTR ERVL 19 449 -72 347 211 56 11 chr10 64727570 64727660 -75589105 - L1ME LINE L1 -341 5780 5687 1881 264 71 8 chr10 64727707 64728494 -75588271 - L2 LINE L2 -56 3257 2421 1100 207 14 18 chr10 64728515 64728732 -75588033 + MER20 DNA MER1_type 1 216 -3 2855 138 58 2 chr10 64730000 64730463 -75586302 - L1MB8 LINE L1 -6 6172 5684 195 196 0 22 chr10 64730488 64730534 -75586231 + L2 LINE L2 3015 3059 -213 279 234 13 13 chr10 64731547 64731624 -75585141 + L2 LINE L2 3189 3265 -7 338 207 13 33 chr10 64733540 64733690 -75583075 + CT-rich Low_complexity Low_complexity 2 148 0 195 341 24 0 chr10 64735066 64735148 -75581617 - MIR SINE MIR -27 235 152 251 234 65 103 chr10 64735531 64735638 -75581127 + MER102a DNA MER1_type 217 319 -11 387 158 13 0 chr10 64735638 64735714 -75581051 + MIR SINE MIR 174 250 -12 1514 215 12 12 chr10 64735947 64736273 -75580492 + MER58B DNA MER1_type 7 332 -9 895 274 132 16 chr10 64736568 64736940 -75579825 + LTR33 LTR ERVL 3 417 -104 299 252 235 8 chr10 64736973 64737092 -75579673 + MIR SINE MIR 114 259 -3 272 346 98 29 chr10 64737153 64737500 -75579265 - L2 LINE L2 -724 2590 2220 332 287 17 94 chr10 64737556 64737612 -75579153 + MIR3 SINE MIR 2 61 -147 1715 157 13 31 chr10 64737612 64737930 -75578835 - AluJo SINE Alu 0 312 1 332 287 17 94 chr10 64737930 64738054 -75578711 + MIR3 SINE MIR 61 168 -40 757 252 90 26 chr10 64738248 64738482 -75578283 - MIR SINE MIR 0 262 14 789 215 65 29 chr10 64739819 64740071 -75576694 + MIR SINE MIR 5 261 -1 194 283 10 91 chr10 64740254 64740353 -75576412 + L2 LINE L2 3178 3268 -4 397 285 56 40 chr10 64740482 64740664 -75576101 - MIR SINE MIR -43 219 36 702 256 55 81 chr10 64740772 64741120 -75575645 - MER102b DNA MER1_type -1 340 2 22 35 0 0 chr10 64741850 64741879 -75574886 + AT_rich Low_complexity Low_complexity 1 29 0 1089 228 79 58 chr10 64743093 64743145 -75573620 + L1MC5 LINE L1 7452 7501 -460 216 0 0 0 chr10 64743145 64743169 -75573596 + (GA)n Simple_repeat Simple_repeat 1 24 0 1089 228 79 58 chr10 64743169 64743301 -75573464 + L1MC5 LINE L1 7501 7629 -332 189 0 0 0 chr10 64743301 64743322 -75573443 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1763 164 0 18 chr10 64743324 64743610 -75573155 - AluJo SINE Alu -31 281 1 1089 228 79 58 chr10 64743610 64743746 -75573019 + L1MC5 LINE L1 7629 7761 -200 1553 215 135 5 chr10 64743746 64744132 -75572633 - MER63B DNA MER1_type 0 436 1 1089 228 79 58 chr10 64744132 64744288 -75572477 + L1MC5 LINE L1 7761 7943 -18 231 330 17 26 chr10 64744365 64744480 -75572285 + MIR SINE MIR 20 133 -75 678 261 35 58 chr10 64744755 64744780 -75571985 + MIR SINE MIR 8 32 -230 2635 138 8 70 chr10 64744780 64745165 -75571600 + L1MB8 LINE L1 5722 6072 -106 2300 93 0 7 chr10 64745165 64745465 -75571300 + AluSx SINE Alu 1 298 -14 2635 138 8 70 chr10 64745465 64745566 -75571199 + L1MB8 LINE L1 6072 6178 0 678 261 35 58 chr10 64745566 64745800 -75570965 + MIR SINE MIR 32 261 -1 284 39 0 78 chr10 64745858 64745883 -75570882 + (T)n Simple_repeat Simple_repeat 1 22 -25 1612 111 9 4 chr10 64745883 64746108 -75570657 - AluSp SINE Alu -87 226 1 284 39 0 78 chr10 64746108 64746133 -75570632 + (T)n Simple_repeat Simple_repeat 22 47 0 951 210 162 34 chr10 64746209 64746537 -75570228 + MLT1D LTR MaLR 16 385 -120 25 31 0 0 chr10 64746574 64746606 -75570159 + AT_rich Low_complexity Low_complexity 1 32 0 * 277 194 14 42 chr10 64746603 64746675 -75570090 - L1MA9 LINE L1 -38 6274 6205 204 40 0 0 chr10 64748261 64748286 -75568479 + (CA)n Simple_repeat Simple_repeat 1 25 0 772 180 37 6 chr10 64748491 64748652 -75568113 + MER20 DNA MER1_type 39 204 -15 789 188 48 6 chr10 64748774 64748939 -75567826 - MER20 DNA MER1_type -19 200 29 230 301 14 0 chr10 64749092 64749165 -75567600 - MIR SINE MIR -5 257 184 292 293 12 0 chr10 64749198 64749280 -75567485 + (CATA)n Simple_repeat Simple_repeat 2 84 0 429 92 15 0 chr10 64749657 64749722 -75567043 + MER34B LTR ERV1 308 373 -192 3541 111 35 4 chr10 64749816 64750329 -75566436 - MER34B LTR ERV1 -29 536 8 461 280 113 42 chr10 64751278 64751517 -75565248 - MIR SINE MIR -5 257 2 528 247 176 22 chr10 64751737 64751919 -75564846 + MLT1F1 LTR MaLR 1 210 -332 931 227 199 0 chr10 64751973 64752224 -75564541 + MLT1F1 LTR MaLR 181 481 -86 312 250 70 101 chr10 64752568 64752763 -75564002 + MIR3 SINE MIR 5 222 -40 457 264 16 8 chr10 64752955 64753080 -75563685 - L2 LINE L2 0 3313 3188 1391 178 58 19 chr10 64753371 64753680 -75563085 + L1MA9 LINE L1 5991 6311 -1 202 306 125 36 chr10 64753799 64754047 -75562718 - L2 LINE L2 -421 2893 2624 756 219 44 25 chr10 64754069 64754398 -75562367 + MLT1B LTR MaLR 1 390 0 402 315 6 44 chr10 64754446 64754627 -75562138 + MER5B DNA MER1_type 2 175 -3 322 185 87 22 chr10 64754908 64755000 -75561765 + MIR SINE MIR 46 143 -119 2221 115 48 48 chr10 64755019 64755394 -75561371 + THE1C LTR MaLR 1 375 0 293 259 65 37 chr10 64756291 64756399 -75560366 + L2 LINE L2 3150 3260 -12 231 203 0 0 chr10 64757414 64757473 -75559292 + (CCA)n Simple_repeat Simple_repeat 3 61 0 521 299 23 42 chr10 64757473 64757734 -75559031 - MIR SINE MIR -2 260 5 1017 286 78 29 chr10 64758879 64759264 -75557501 - MLT1I LTR MaLR 0 409 6 789 202 85 81 chr10 64759745 64759993 -75556772 - MIR SINE MIR -2 260 12 1070 189 38 47 chr10 64760479 64760691 -75556074 + MER63A DNA MER1_type 1 210 0 180 0 0 0 chr10 64760734 64760754 -75556011 + (A)n Simple_repeat Simple_repeat 1 20 0 199 301 86 0 chr10 64760925 64761018 -75555747 + MIR3 SINE MIR 6 106 -102 22 35 0 0 chr10 64761312 64761341 -75555424 + AT_rich Low_complexity Low_complexity 1 29 0 463 299 64 29 chr10 64761374 64761578 -75555187 - MIR SINE MIR -50 212 2 222 118 0 0 chr10 64761942 64761976 -75554789 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 457 284 106 24 chr10 64762670 64762878 -75553887 + MIR SINE MIR 22 246 -16 196 236 69 69 chr10 64763125 64763197 -75553568 + MIR SINE MIR 63 134 -74 2256 102 7 0 chr10 64763197 64763492 -75553273 - AluSq SINE Alu -16 297 1 218 179 0 125 chr10 64764346 64764402 -75552363 - L2 LINE L2 -195 3077 3029 336 228 139 0 chr10 64764545 64764624 -75552141 - MLT1E1 LTR MaLR -505 149 60 28 0 0 0 chr10 64765442 64765470 -75551295 + AT_rich Low_complexity Low_complexity 1 28 0 2354 84 0 0 chr10 64765488 64765787 -75550978 - AluY SINE Alu -12 299 1 992 207 162 6 chr10 64766062 64766096 -75550669 - MLT2B1 LTR ERVL -2 552 525 387 41 0 0 chr10 64766096 64766145 -75550620 + (TG)n Simple_repeat Simple_repeat 2 50 0 992 207 162 6 chr10 64766145 64766392 -75550373 - MLT2B1 LTR ERVL -29 525 166 5684 145 16 18 chr10 64766485 64767464 -75549301 - L1MA5 LINE L1 -2 6298 5322 397 105 18 0 chr10 64767465 64767522 -75549243 - MER4E LTR ERV1 -26 740 683 1604 229 13 11 chr10 64767528 64767904 -75548861 - L1M2 LINE L1 -5113 2096 1720 764 269 116 57 chr10 64767930 64768497 -75548268 - L1M2 LINE L1 -6335 874 1 470 238 81 43 chr10 64768506 64768716 -75548049 + L1MC5 LINE L1 7708 7925 -36 299 279 43 37 chr10 64771043 64771230 -75545535 + LTR67 LTR ERVL 346 515 -8 22 0 0 0 chr10 64771492 64771514 -75545251 + AT_rich Low_complexity Low_complexity 1 22 0 812 212 76 0 chr10 64772321 64772505 -75544260 - MIR SINE MIR -60 202 5 688 308 49 0 chr10 64772562 64772747 -75544018 + MER91A DNA MER1_type 1 194 -2 331 365 72 31 chr10 64773311 64773707 -75543058 + L2 LINE L2 2615 3042 -230 246 373 24 24 chr10 64773944 64774070 -75542695 + L2 LINE L2 3136 3261 -11 203 152 0 0 chr10 64774794 64774827 -75541938 + (CAT)n Simple_repeat Simple_repeat 2 34 0 275 309 0 12 chr10 64774920 64775004 -75541761 - MIR SINE MIR -63 145 63 552 218 35 104 chr10 64775275 64775477 -75541288 + MER91B DNA MER1_type 3 190 0 291 268 109 43 chr10 64775481 64775619 -75541146 - MLT1K LTR MaLR -246 342 196 1416 185 44 105 chr10 64775813 64776202 -75540563 + MLT1A1 LTR MaLR 1 365 0 1514 192 0 0 chr10 64776424 64776695 -75540070 - AluJb SINE Alu -8 304 34 22 0 0 0 chr10 64777555 64777577 -75539188 + AT_rich Low_complexity Low_complexity 1 22 0 265 277 142 71 chr10 64777785 64778124 -75538641 - MLT1K LTR MaLR -2 586 224 268 289 157 13 chr10 64779238 64779397 -75537368 - L2 LINE L2 -15 3298 3117 439 280 77 33 chr10 64779465 64779647 -75537118 + MIR SINE MIR 17 206 -56 5349 65 20 17 chr10 64780957 64781615 -75535150 - PABL_A LTR ERV1 0 660 1 1639 159 14 24 chr10 64782149 64782444 -75534321 + AluJb SINE Alu 3 294 -18 632 293 148 15 chr10 64782652 64782983 -75533782 + L3 LINE CR1 1190 1564 -13 631 249 34 82 chr10 64783344 64783577 -75533188 - L1ME3A LINE L1 -27 6143 5922 * 633 241 50 91 chr10 64783567 64783630 -75533135 - L1ME3A LINE L1 -609 5553 5489 893 128 0 8 chr10 64783630 64783755 -75533010 - FLAM_C SINE Alu -9 124 1 633 241 50 91 chr10 64783755 64784133 -75532632 - L1ME3A LINE L1 -673 5489 5107 * 42762 47 2 2 chr10 64784112 64790124 -75526641 - L1PA4 LINE L1 0 6155 144 12263 75 1 1 chr10 64790255 64791844 -75524921 - L1P LINE L1 -4536 1610 22 1446 284 131 22 chr10 64791857 64792795 -75523970 - L1ME3A LINE L1 -993 5153 4114 665 137 0 0 chr10 64793129 64793224 -75523541 - MLT2B3 LTR ERVL -94 460 366 209 281 0 67 chr10 64794268 64794357 -75522408 + MIR SINE MIR 106 188 -74 11827 130 48 33 chr10 64794525 64795467 -75521298 - Tigger1 DNA MER2_type 0 2418 1492 1986 133 3 0 chr10 64795467 64795753 -75521012 + AluSx SINE Alu 5 291 -21 207 0 0 0 chr10 64795756 64795779 -75520986 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 11827 130 48 33 chr10 64795779 64796841 -75519924 - Tigger1 DNA MER2_type -927 1491 379 1478 146 138 0 chr10 64796843 64797096 -75519669 + Ricksha DNA DNA 2 289 -2957 1269 134 90 0 chr10 64797094 64797295 -75519470 + Ricksha DNA DNA 1821 2039 -1207 * 5214 134 43 14 chr10 64797314 64798195 -75518570 + Ricksha DNA DNA 2208 3114 -132 2877 174 107 52 chr10 64798195 64798907 -75517858 - L1MB8 LINE L1 -78 6100 5350 1569 218 123 12 chr10 64799042 64799503 -75517262 - L1ME3A LINE L1 -14 6156 5658 274 250 15 0 chr10 64800075 64800143 -75516622 - L1ME LINE L1 -5998 72 4 640 237 33 95 chr10 64800154 64800365 -75516400 + MER63A DNA MER1_type 9 206 -4 23 0 0 0 chr10 64800649 64800672 -75516093 + AT_rich Low_complexity Low_complexity 1 23 0 2091 107 0 0 chr10 64800926 64801198 -75515567 + AluY SINE Alu 21 292 -19 2557 122 8 3 chr10 64801624 64801977 -75514788 + THE1A LTR MaLR 1 355 0 10774 22 5 0 chr10 64801990 64803969 -75512796 + L1PA4 LINE L1 4175 6147 -8 315 65 0 0 chr10 64803971 64804017 -75512748 + (TA)n Simple_repeat Simple_repeat 2 47 0 498 218 0 0 chr10 64804868 64805024 -75511741 + (TA)n Simple_repeat Simple_repeat 2 157 0 229 270 0 40 chr10 64805033 64805133 -75511632 + L1MC4 LINE L1 6611 6706 -1336 538 304 33 16 chr10 64805429 64805672 -75511093 - L1MEd LINE L1 -5281 838 592 1404 206 56 21 chr10 64805676 64806049 -75510716 - Zaphod DNA AcHobo 0 4031 3646 2768 254 47 11 chr10 64806054 64806836 -75509929 - Zaphod DNA AcHobo -3160 871 62 413 329 130 54 chr10 64806837 64807375 -75509390 - L1MEd LINE L1 -5535 584 6 204 312 121 21 chr10 64807634 64807775 -75508990 + MIR SINE MIR 5 159 -103 673 228 39 22 chr10 64808504 64808684 -75508081 + L1ME LINE L1 5346 5528 -634 9444 189 29 15 chr10 64808696 64810735 -75506030 + L1MEc LINE L1 2224 5472 -743 3957 157 72 10 chr10 64810735 64811256 -75505509 + L1PA16 LINE L1 5446 6030 -136 2297 135 39 33 chr10 64811256 64811618 -75505147 - THE1B LTR MaLR 0 364 1 3957 157 72 10 chr10 64811618 64811755 -75505010 + L1PA16 LINE L1 6030 6157 -9 2512 255 139 34 chr10 64811760 64811913 -75504852 + L1M4 LINE L1 2161 2297 -3849 526 236 36 0 chr10 64811913 64812023 -75504742 + MER81 DNA DNA 1 114 0 2512 255 139 34 chr10 64812023 64813781 -75502984 + L1M4 LINE L1 2297 4329 -1817 216 0 0 0 chr10 64813781 64813805 -75502960 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1390 43 0 6 chr10 64813807 64813971 -75502794 - AluY SINE Alu -30 281 119 188 257 67 76 chr10 64814023 64814128 -75502637 - L2 LINE L2 -178 3094 2991 1535 118 0 13 chr10 64817116 64817344 -75499421 - AluSg/x SINE Alu -2 310 86 213 154 0 0 chr10 64820291 64820330 -75496435 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 372 22 0 0 chr10 64820690 64820735 -75496030 + (TG)n Simple_repeat Simple_repeat 2 46 0 1581 164 57 114 chr10 64820766 64821151 -75495614 - MLT1A1 LTR MaLR -1 364 2 213 322 177 35 chr10 64821608 64821891 -75494874 - L2 LINE L2 -44 3228 2906 2918 88 6 0 chr10 64821913 64822266 -75494499 + THE1A LTR MaLR 1 355 0 11906 88 5 15 chr10 64822266 64822778 -75493987 + THE1A-int LTR MaLR 1 517 -1063 7012 61 5 0 chr10 64822778 64824084 -75492681 - L1PA7 LINE L1 -5 6149 4813 11906 88 5 15 chr10 64824084 64825167 -75491598 + THE1A-int LTR MaLR 517 1580 0 2769 69 6 19 chr10 64825167 64825483 -75491282 + THE1A LTR MaLR 1 313 -42 3922 111 0 4 chr10 64825483 64825996 -75490769 - MER9 LTR ERVK 0 511 1 2769 69 6 19 chr10 64825996 64826039 -75490726 + THE1A LTR MaLR 313 355 0 2473 147 32 34 chr10 64826039 64826447 -75490318 + MSTB LTR MaLR 20 426 0 3543 191 19 36 chr10 64826553 64827276 -75489489 + MER50 LTR ERV1 1 711 -23 9765 141 10 40 chr10 64827277 64828945 -75487820 + MER50-int LTR ERV1 1 1732 -5473 1285 173 25 111 chr10 64828943 64829267 -75487498 + MER50-int LTR ERV1 1555 1850 -5355 * 6077 183 32 87 chr10 64829259 64830667 -75486098 + MER50-int LTR ERV1 2784 4114 -3091 * 6909 126 12 10 chr10 64830656 64831669 -75485096 + MER50-int LTR ERV1 6182 7196 -9 3590 179 55 34 chr10 64831669 64832374 -75484391 + MER50 LTR ERV1 1 720 -14 215 358 50 41 chr10 64832393 64832611 -75484154 - L2 LINE L2 -542 2772 2553 1000 283 102 30 chr10 64832783 64833585 -75483180 - L2 LINE L2 0 3313 2466 343 330 122 3 chr10 64833708 64834002 -75482763 + L1ME2 LINE L1 4887 5215 -931 743 259 65 12 chr10 64834026 64834329 -75482436 + L1ME2 LINE L1 5684 5954 -210 1527 197 227 66 chr10 64834771 64835334 -75481431 + MLT1E1 LTR MaLR 1 654 0 215 349 40 20 chr10 64836041 64836190 -75480575 - L2 LINE L2 0 3272 3121 245 211 0 84 chr10 64837114 64837185 -75479580 + MER69 DNA AcHobo 2462 2526 0 353 238 23 64 chr10 64837570 64837742 -75479023 - L1ME4a LINE L1 -30 6091 5927 27 29 0 0 chr10 64837743 64837777 -75478988 + AT_rich Low_complexity Low_complexity 1 34 0 1166 239 94 66 chr10 64837876 64838377 -75478388 - MLT1H1 LTR MaLR -38 517 3 1043 193 14 24 chr10 64838393 64838600 -75478165 - MER3 DNA MER1_type 0 209 5 467 281 23 76 chr10 64838605 64838907 -75477858 + L1MC4 LINE L1 6653 7025 -1017 15418 195 30 10 chr10 64838935 64843617 -75473148 + L1PA13 LINE L1 1 4857 -1940 4082 96 7 7 chr10 64843660 64844203 -75472562 + L1PA13 LINE L1 6270 6812 -2 524 297 25 21 chr10 64844226 64844476 -75472289 + L1MC4 LINE L1 7017 7231 -730 678 250 70 78 chr10 64844606 64844833 -75471932 + L1MC5 LINE L1 7305 7532 -429 2217 109 0 0 chr10 64844833 64845173 -75471592 + AluSq SINE Alu 1 340 0 678 250 70 78 chr10 64845173 64845556 -75471209 + L1MC5 LINE L1 7532 7911 -50 993 176 0 24 chr10 64845945 64846115 -75470650 + FRAM SINE Alu 1 166 0 920 149 0 0 chr10 64847080 64847214 -75469551 - L1PA10 LINE L1 -13 6155 6022 4670 91 27 9 chr10 64847215 64847926 -75468839 - L1PA10 LINE L1 -286 5882 5163 6155 151 21 31 chr10 64847926 64849008 -75467757 - MER11C LTR ERVK 0 1071 1 4670 91 27 9 chr10 64849008 64849155 -75467610 - L1PA10 LINE L1 -1005 5163 5020 479 234 0 47 chr10 64849650 64849757 -75467008 - L2 LINE L2 -16 3297 3196 622 236 144 42 chr10 64849776 64850089 -75466676 - MER7A DNA MER2_type -1 345 3 2902 277 163 25 chr10 64850283 64851733 -75465032 + L2 LINE L2 1217 2865 -449 529 144 0 62 chr10 64851751 64851848 -75464917 + MLT2B3 LTR ERVL 462 552 -2 246 95 0 0 chr10 64851914 64851956 -75464809 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr10 64852766 64852794 -75463971 + AT_rich Low_complexity Low_complexity 1 28 0 243 353 74 8 chr10 64854039 64854155 -75462610 + L2 LINE L2 2971 3095 -172 998 190 115 20 chr10 64854155 64854355 -75462410 - MER20 DNA MER1_type 0 219 1 1904 186 22 22 chr10 64854366 64854731 -75462034 + MLT1A1 LTR MaLR 1 365 0 1527 204 80 13 chr10 64854887 64855391 -75461374 - MLT1E2 LTR MaLR -8 618 89 1450 165 62 55 chr10 64855398 64855614 -75461151 - LTR52 LTR ERVL -104 317 97 1640 207 25 17 chr10 64855614 64855972 -75460793 - MLT1A1 LTR MaLR 0 365 5 1450 165 62 55 chr10 64855972 64856064 -75460701 - LTR52 LTR ERVL -324 97 7 2079 103 46 0 chr10 64856116 64856398 -75460367 - AluSg SINE Alu -15 295 1 44867 36 2 10 chr10 64856419 64862627 -75454138 - L1PA4 LINE L1 0 6155 1 240 254 32 0 chr10 64863253 64863316 -75453449 + L3 LINE CR1 733 797 -780 234 105 0 0 chr10 64863585 64863623 -75453142 + (TG)n Simple_repeat Simple_repeat 1 38 0 1385 190 29 89 chr10 64863717 64864064 -75452701 + Charlie1a DNA MER1_type 5 330 -1125 687 187 36 14 chr10 64864076 64864215 -75452550 + MLT2F LTR ERVL 522 663 0 211 272 48 72 chr10 64864223 64864348 -75452417 + L3 LINE CR1 1230 1351 -226 554 245 223 0 chr10 64864353 64864537 -75452228 + MIR SINE MIR 28 252 -10 181 288 91 0 chr10 64864550 64864616 -75452149 + L3 LINE CR1 1335 1406 -171 3041 109 25 2 chr10 64864620 64865062 -75451703 - Tigger2 DNA MER2_type 0 2718 2267 452 118 15 0 chr10 64865046 64865114 -75451651 - Tigger2 DNA MER2_type -2649 69 1 * 213 340 13 0 chr10 64865200 64865286 -75451479 + MIR SINE MIR 58 144 -64 422 315 0 63 chr10 64865348 64865491 -75451274 + L3 LINE CR1 1437 1570 -7 38 0 0 0 chr10 64865552 64865590 -75451175 + AT_rich Low_complexity Low_complexity 1 38 0 256 330 11 78 chr10 64866372 64866563 -75450202 - MER5B DNA MER1_type 0 178 1 2151 62 0 11 chr10 64866981 64867241 -75449524 + AluSg SINE Alu 39 295 -15 221 146 0 0 chr10 64867297 64867338 -75449427 + L2 LINE L2 3273 3313 0 449 239 49 49 chr10 64867825 64867988 -75448777 + MLT1J1 LTR MaLR 1 163 -283 256 208 21 0 chr10 64868101 64868149 -75448616 - MLT1J2 LTR MaLR -152 298 250 406 206 0 0 chr10 64868381 64868454 -75448311 + MIR SINE MIR 78 150 -112 5266 120 21 15 chr10 64868457 64869265 -75447500 + L1PA16 LINE L1 5352 6164 -2 478 143 52 0 chr10 64869279 64869356 -75447409 - AluSg/x SINE Alu -15 297 217 238 185 15 62 chr10 64869356 64869421 -75447344 + MIR SINE MIR 137 198 -64 45 34 0 0 chr10 64869723 64869782 -75446983 + AT_rich Low_complexity Low_complexity 1 59 0 185 163 102 61 chr10 64870266 64870315 -75446450 - L2 LINE L2 -12 3260 3210 1974 131 0 20 chr10 64871800 64872120 -75444645 - AluSx SINE Alu 0 312 1 428 271 145 14 chr10 64872554 64872768 -75443997 + MIR SINE MIR 14 255 -7 1237 212 163 34 chr10 64872788 64872895 -75443870 - MSTD LTR MaLR 0 396 304 1964 130 98 9 chr10 64872895 64873210 -75443555 - MER61A LTR ERV1 0 343 1 1237 212 163 34 chr10 64873210 64873451 -75443314 - MSTD LTR MaLR -92 304 3 720 312 118 54 chr10 64873534 64874034 -75442731 + L3 LINE CR1 561 1092 -485 216 0 0 0 chr10 64875262 64875286 -75441479 + (T)n Simple_repeat Simple_repeat 1 24 0 294 302 108 23 chr10 64876148 64876277 -75440488 + MIR3 SINE MIR 19 158 -50 2211 113 7 3 chr10 64876474 64876774 -75439991 + AluSg SINE Alu 1 301 -9 419 304 60 15 chr10 64877173 64877374 -75439391 + MIR SINE MIR 47 256 -6 1845 161 19 7 chr10 64878579 64878889 -75437876 - MLT1C LTR MaLR -4 463 150 611 214 0 0 chr10 64878901 64879018 -75437747 + MLT1B LTR MaLR 1 117 -273 22 0 0 0 chr10 64881039 64881061 -75435704 + AT_rich Low_complexity Low_complexity 1 22 0 5343 119 56 15 chr10 64881062 64881215 -75435550 - L1MA6 LINE L1 -5 6295 6150 2053 100 11 0 chr10 64881215 64881484 -75435281 - AluSx SINE Alu -18 294 23 5343 119 56 15 chr10 64881484 64882210 -75434555 - L1MA6 LINE L1 -150 6150 5380 559 263 112 27 chr10 64882213 64882437 -75434328 - L1M1 LINE L1 -5425 2140 1898 243 188 0 0 chr10 64882464 64882512 -75434253 - L1M1 LINE L1 -4635 1930 1883 509 288 16 8 chr10 64882545 64882753 -75434012 - L1M1 LINE L1 -6676 813 213 1234 275 110 23 chr10 64882992 64883681 -75433084 - L1M1 LINE L1 -6588 901 16 234 317 10 29 chr10 64884804 64884908 -75431857 - MIR SINE MIR -51 211 110 2190 202 40 20 chr10 64884916 64885372 -75431393 - MLT1C LTR MaLR 0 467 3 554 32 0 0 chr10 64885825 64885887 -75430878 - HERV17 LTR ERV1 -2776 5850 5789 * 1553 81 14 27 chr10 64885835 64886056 -75430709 + HERV17 LTR ERV1 5802 6019 -2607 276 103 0 0 chr10 64886049 64886088 -75430677 + HERV17 LTR ERV1 7510 7548 -1078 * 2436 62 0 0 chr10 64886078 64886370 -75430395 + HERV17 LTR ERV1 8335 8626 0 2675 58 0 0 chr10 64886370 64886696 -75430069 + LTR17 LTR ERV1 1 326 -454 325 196 0 0 chr10 64886878 64886934 -75429831 + MER94 DNA DNA 1 56 -78 23 33 0 0 chr10 64887034 64887064 -75429701 + AT_rich Low_complexity Low_complexity 1 30 0 504 255 27 33 chr10 64887319 64887503 -75429262 + MER114 LTR ERV 4 186 -462 1822 186 22 6 chr10 64887517 64887882 -75428883 - L1 LINE L1 -2391 3755 3385 * 9032 164 29 14 chr10 64887880 64890253 -75426512 + L1MA4 LINE L1 3611 6020 -280 22 0 0 0 chr10 64890262 64890284 -75426481 + AT_rich Low_complexity Low_complexity 1 22 0 5747 149 13 4 chr10 64890284 64891576 -75425189 + L1M2 LINE L1 4345 5651 -640 2765 117 5 8 chr10 64892227 64892603 -75424162 - THE1C LTR MaLR 0 375 1 10849 107 32 40 chr10 64892603 64894195 -75422570 - THE1C-int LTR MaLR 0 1580 1 230 97 0 0 chr10 64894396 64894427 -75422338 + MER63A DNA MER1_type 1 31 -179 564 244 23 8 chr10 64894464 64894595 -75422170 + MER63A DNA MER1_type 39 171 -39 2062 138 0 10 chr10 64898386 64898684 -75418081 - AluSx SINE Alu -17 295 1 226 143 54 36 chr10 64898684 64898740 -75418025 - HSMAR1 DNA Mariner -3 1284 1228 599 291 11 6 chr10 64898877 64899059 -75417706 - MIR SINE MIR -5 257 75 2218 89 0 0 chr10 64903266 64903537 -75413228 + AluSx SINE Alu 1 271 -41 672 249 116 46 chr10 64905656 64905897 -75410868 - MIR SINE MIR 0 262 5 2061 117 31 0 chr10 64906002 64906292 -75410473 - AluSx SINE Alu -13 299 1 2897 174 46 61 chr10 64906795 64907749 -75409016 - LTR13 LTR ERVK 0 1007 16 407 299 61 30 chr10 64908512 64908709 -75408056 + MIR3 SINE MIR 4 206 -2 1300 222 75 49 chr10 64909108 64909495 -75407270 + MLT2C1 LTR ERVL 1 397 0 848 205 36 18 chr10 64910045 64910211 -75406554 - MER20 DNA MER1_type -50 169 1 361 257 187 18 chr10 64910611 64910784 -75405981 + MIR SINE MIR 64 262 0 5678 155 15 13 chr10 64911972 64913456 -75403309 - L1PA16 LINE L1 0 6166 4680 423 311 51 62 chr10 64913735 64913992 -75402773 + MLT1K LTR MaLR 166 419 -169 23 0 0 0 chr10 64913993 64914016 -75402749 + AT_rich Low_complexity Low_complexity 1 23 0 700 287 91 57 chr10 64915032 64915384 -75401381 + L2 LINE L2 2950 3313 0 321 286 14 0 chr10 64915448 64915518 -75401247 + MIR SINE MIR 1 71 -191 471 258 19 57 chr10 64915646 64915889 -75400876 + MIR SINE MIR 37 261 -1 207 273 45 15 chr10 64916385 64916451 -75400314 + MIR SINE MIR 88 155 -107 391 264 163 47 chr10 64916705 64916982 -75399783 + L2 LINE L2 3005 3313 0 356 326 38 23 chr10 64917852 64917984 -75398781 - L2 LINE L2 0 3272 3139 1683 203 39 9 chr10 64918086 64918416 -75398349 - MER58B DNA MER1_type -1 340 1 232 245 7 84 chr10 64918506 64918649 -75398116 + G-rich Low_complexity Low_complexity 6 137 0 276 118 0 0 chr10 64918668 64918719 -75398046 + L1MA3 LINE L1 6255 6305 0 234 273 57 23 chr10 64918810 64918898 -75397867 - MER103 DNA DNA -68 98 8 237 299 274 13 chr10 64920179 64920336 -75396429 - MIR3 SINE MIR -6 202 5 473 120 217 0 chr10 64921047 64921139 -75395626 + MER53 DNA DNA 1 112 -77 472 290 53 0 chr10 64921217 64921348 -75395417 - MIR3 SINE MIR -21 187 50 816 161 0 8 chr10 64924960 64925090 -75391675 - AluJb SINE Alu -181 131 3 222 300 0 0 chr10 64925227 64925287 -75391478 + L2 LINE L2 3213 3272 0 485 271 99 57 chr10 64925376 64925568 -75391197 + MIR SINE MIR 25 224 -38 271 268 83 71 chr10 64927249 64927417 -75389348 + MER5A DNA MER1_type 5 174 -15 619 259 35 35 chr10 64927418 64927592 -75389173 + MER5B DNA MER1_type 1 174 -4 403 279 130 19 chr10 64927959 64928120 -75388645 + L2 LINE L2 3130 3308 -5 2230 94 14 0 chr10 64929713 64930010 -75386755 + AluSp SINE Alu 1 301 -12 263 309 29 0 chr10 64930196 64930264 -75386501 - L2 LINE L2 -18 3254 3185 400 296 26 53 chr10 64930392 64930581 -75386184 - MIR SINE MIR -46 216 33 567 0 0 0 chr10 64930643 64930706 -75386059 + (CA)n Simple_repeat Simple_repeat 2 64 0 616 188 39 8 chr10 64931470 64931598 -75385167 - MIR SINE MIR -101 161 30 180 0 0 0 chr10 64932254 64932274 -75384491 + (TC)n Simple_repeat Simple_repeat 2 21 0 951 144 0 0 chr10 64932274 64932413 -75384352 - AluSg/x SINE Alu -19 293 155 22 56 0 0 chr10 64932468 64932504 -75384261 + AT_rich Low_complexity Low_complexity 1 36 0 296 204 68 34 chr10 64932561 64932649 -75384116 + MIR SINE MIR 91 181 -81 240 292 0 31 chr10 64932994 64933102 -75383663 + (CATG)n Simple_repeat Simple_repeat 1 104 0 258 225 100 12 chr10 64933831 64933911 -75382854 + L1MC/D LINE L1 5458 5544 -2264 283 117 67 17 chr10 64934258 64934318 -75382447 + HsTC2 DNA Tc2 39 101 -1797 468 279 20 66 chr10 64934329 64934526 -75382239 - L1MEd LINE L1 -5487 632 445 253 250 0 0 chr10 64934675 64934731 -75382034 + HsTC2 DNA Tc2 1824 1879 -19 258 292 0 0 chr10 64935810 64935875 -75380890 - L2 LINE L2 -14 3299 3235 28 29 0 0 chr10 64936343 64936378 -75380387 + AT_rich Low_complexity Low_complexity 1 35 0 415 247 11 0 chr10 64938908 64938997 -75377768 + MER58B DNA MER1_type 252 341 0 1797 181 127 22 chr10 64939283 64939693 -75377072 + MSTB2 LTR MaLR 5 457 0 300 53 0 0 chr10 64941008 64941046 -75375719 + (TG)n Simple_repeat Simple_repeat 1 38 0 1787 161 7 4 chr10 64941046 64941326 -75375439 - AluSx SINE Alu -31 281 1 2408 91 0 0 chr10 64941480 64941788 -75374977 - AluY SINE Alu -3 308 1 1265 193 19 87 chr10 64941796 64942118 -75374647 - AluJo SINE Alu -12 300 1 400 310 19 19 chr10 64942195 64942350 -75374415 - MIR3 SINE MIR -40 168 14 272 299 37 28 chr10 64943365 64943472 -75373293 + MIR SINE MIR 112 219 -43 235 251 34 31 chr10 64944484 64944560 -75372205 - MER5A DNA MER1_type -82 106 20 622 235 84 47 chr10 64944907 64945252 -75371513 + LTR18B LTR ERVL 1 614 0 319 248 62 26 chr10 64946080 64946193 -75370572 + MIR SINE MIR 37 153 -109 1186 309 32 22 chr10 64946584 64947086 -75369679 - LTR33 LTR ERVL -4 517 11 2264 122 0 0 chr10 64947196 64947500 -75369265 - AluSx SINE Alu -8 304 1 403 279 47 29 chr10 64947565 64947737 -75369028 + MIR SINE MIR 24 198 -64 1790 259 54 28 chr10 64948987 64949723 -75367042 + L2 LINE L2 2514 3263 -50 400 297 10 10 chr10 64949767 64949868 -75366897 - L2 LINE L2 -4 3268 3168 686 226 50 0 chr10 64950054 64950213 -75366552 - MLT1A1 LTR MaLR 0 365 199 406 258 31 31 chr10 64951522 64951650 -75365115 - MIR SINE MIR -116 146 19 311 293 17 92 chr10 64951627 64951801 -75364964 + MIR SINE MIR 29 189 -73 * 264 253 72 36 chr10 64952173 64952256 -75364509 + MIR SINE MIR 84 169 -93 752 250 57 42 chr10 64952265 64952529 -75364236 - L2 LINE L2 0 3313 3046 340 135 0 0 chr10 64952530 64952582 -75364183 + MLT1A1 LTR MaLR 1 52 -313 * 446 198 0 0 chr10 64952579 64952660 -75364105 - MLT1A1 LTR MaLR -223 142 62 237 140 120 0 chr10 64952675 64952725 -75364040 + MLT1A1 LTR MaLR 307 362 -3 592 218 21 0 chr10 64953415 64953557 -75363208 + MER117 DNA MER1_type 3 147 -50 243 306 87 44 chr10 64954785 64954968 -75361797 - L2 LINE L2 -213 3059 2869 324 0 0 0 chr10 64955541 64955577 -75361188 + (TG)n Simple_repeat Simple_repeat 2 37 0 249 291 9 55 chr10 64956372 64956482 -75360283 - MIR3 SINE MIR -3 205 101 289 248 106 35 chr10 64956748 64956861 -75359904 - MIR3 SINE MIR -11 197 77 248 191 32 16 chr10 64956928 64956991 -75359774 - MIR3 SINE MIR -133 75 12 3014 174 11 25 chr10 64957920 64958482 -75358283 + MER41C LTR ERV1 1 554 0 306 244 39 0 chr10 64959141 64959219 -75357546 + MIR SINE MIR 112 192 -70 477 193 37 37 chr10 64959426 64959535 -75357230 + MER5A DNA MER1_type 1 109 -80 592 208 77 0 chr10 64959535 64959665 -75357100 + MER5A DNA MER1_type 48 187 -2 575 317 45 53 chr10 64960850 64961229 -75355536 - L1MEd LINE L1 -5451 668 293 523 183 75 17 chr10 64961242 64961362 -75355403 + MLT1C LTR MaLR 1 127 -378 40644 39 21 1 chr10 64961362 64967391 -75349374 + L1PA3 LINE L1 3 6151 -4 898 234 95 11 chr10 64967528 64967801 -75348964 + MLT1C LTR MaLR 172 467 0 241 224 0 15 chr10 64968023 64968090 -75348675 - L1MEd LINE L1 -6004 115 50 1710 241 74 37 chr10 64968833 64969404 -75347361 - MLT1E LTR MaLR 0 593 3 638 268 70 108 chr10 64969558 64970132 -75346633 + L2 LINE L2 2049 3313 0 22 0 0 0 chr10 64970731 64970753 -75346012 + AT_rich Low_complexity Low_complexity 1 22 0 400 302 84 17 chr10 64971966 64972145 -75344620 - MIR SINE MIR -50 212 22 278 228 0 13 chr10 64973597 64973676 -75343089 + L1ME4a LINE L1 5573 5650 -471 346 285 150 35 chr10 64973735 64974075 -75342690 + L1ME4a LINE L1 5691 6069 -52 181 308 0 0 chr10 64975647 64975686 -75341079 + L2 LINE L2 3012 3050 -222 465 280 55 74 chr10 64975868 64976125 -75340640 - MIR SINE MIR -1 261 10 33 25 0 0 chr10 64976153 64976193 -75340572 + AT_rich Low_complexity Low_complexity 1 40 0 883 291 45 0 chr10 64976420 64976709 -75340056 - MLT1I LTR MaLR -2 407 106 310 218 138 23 chr10 64977084 64977171 -75339594 + MIR SINE MIR 36 132 -76 219 310 166 37 chr10 64977178 64977365 -75339400 - L3b LINE CR1 -164 1419 1209 304 301 28 108 chr10 64978683 64978859 -75337906 + MER5A DNA MER1_type 28 189 0 230 298 77 19 chr10 64979093 64979197 -75337568 - L2 LINE L2 -15 3298 3189 234 240 0 0 chr10 64979439 64979489 -75337276 + MLT1J LTR MaLR 112 161 -350 * 284 295 53 37 chr10 64979459 64979649 -75337116 + MLT1L LTR MaLR 198 390 -225 380 342 35 5 chr10 64979941 64980143 -75336622 + MLT1K LTR MaLR 12 219 -369 401 321 46 0 chr10 64980346 64980477 -75336288 + L3 LINE CR1 1440 1576 -1 281 328 61 8 chr10 64980629 64980760 -75336005 + MIR SINE MIR 16 153 -109 360 311 60 55 chr10 64980809 64980992 -75335773 - MIR SINE MIR -9 253 70 243 157 20 39 chr10 64981754 64981805 -75334960 - MLT1J2 LTR MaLR -341 109 60 432 287 62 73 chr10 64981886 64982227 -75334538 + MLT1I LTR MaLR 71 407 -2 409 412 81 18 chr10 64982480 64982844 -75333921 - L2 LINE L2 -42 3230 2847 215 300 17 0 chr10 64985724 64985784 -75330981 - L2 LINE L2 -1 3312 3252 905 211 55 55 chr10 64985865 64986273 -75330492 - MLT1A1 LTR MaLR 0 365 1 704 193 7 7 chr10 65086320 65086460 -75230305 + AluSg/x SINE Alu 157 296 -16 2260 114 0 0 chr10 65086471 65086768 -75229997 + AluSq SINE Alu 3 299 -14 1065 85 0 0 chr10 65087346 65087475 -75229290 + AluSc SINE Alu 1 129 -180 21 36 0 0 chr10 65088143 65088171 -75228594 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 65088214 65088238 -75228527 + AT_rich Low_complexity Low_complexity 1 24 0 418 169 65 0 chr10 65088769 65088846 -75227919 - MER5A DNA MER1_type -107 82 1 828 181 121 70 chr10 65088860 65089059 -75227706 + AluJo SINE Alu 1 209 -103 2022 136 10 0 chr10 65089097 65089398 -75227367 + AluSc SINE Alu 1 304 -5 228 224 0 0 chr10 65089536 65089585 -75227180 + L2 LINE L2 3229 3277 -36 3133 159 29 63 chr10 65089586 65090253 -75226512 - LTR8 LTR ERV1 0 691 48 200 182 55 18 chr10 65090365 65090420 -75226345 + L2 LINE L2 1754 1810 -1504 2247 96 0 4 chr10 65090422 65090727 -75226038 - AluSg SINE Alu 0 304 1 1740 123 77 43 chr10 65090732 65091032 -75225733 - AluJo SINE Alu -2 310 1 1397 187 49 0 chr10 65091148 65091415 -75225350 - AluJb SINE Alu -8 304 25 1931 74 0 0 chr10 65091523 65091752 -75225013 - AluY SINE Alu -81 230 2 588 240 46 29 chr10 65093576 65093751 -75223014 + MER5B DNA MER1_type 1 178 0 1158 109 8 96 chr10 65094583 65094822 -75221943 + L1MC1 LINE L1 6116 6333 0 350 226 288 34 chr10 65095077 65095223 -75221542 - MER5A DNA MER1_type 0 189 7 332 231 46 37 chr10 65095240 65095348 -75221417 + MIR SINE MIR 27 135 -127 2044 125 36 0 chr10 65096148 65096428 -75220337 + AluSx SINE Alu 1 290 -22 1963 135 17 14 chr10 65096490 65096786 -75219979 - AluJb SINE Alu -13 299 3 2158 119 3 0 chr10 65097465 65097759 -75219006 + AluSp SINE Alu 1 295 -18 577 185 109 8 chr10 65097771 65097890 -75218875 + FLAM_C SINE Alu 3 133 0 879 166 0 7 chr10 65097898 65098043 -75218722 - AluSg/x SINE Alu -11 301 158 1941 102 0 4 chr10 65098143 65098398 -75218367 + AluSx SINE Alu 47 300 -12 223 186 0 23 chr10 65100100 65100143 -75216622 + MIR SINE MIR 221 262 0 21 95 0 0 chr10 65102939 65103002 -75213763 + GC_rich Low_complexity Low_complexity 1 63 0 250 133 22 22 chr10 65103171 65103216 -75213549 - AluSp SINE Alu -121 182 138 22 35 0 0 chr10 65103229 65103258 -75213507 + AT_rich Low_complexity Low_complexity 1 29 0 276 257 74 107 chr10 65103258 65103476 -75213289 - L1ME4a LINE L1 -6 6115 5912 2314 88 10 0 chr10 65103476 65103771 -75212994 - AluSg SINE Alu -12 298 1 276 257 74 107 chr10 65103771 65103918 -75212847 - L1ME4a LINE L1 -209 5912 5762 27 29 0 0 chr10 65103925 65103959 -75212806 + AT_rich Low_complexity Low_complexity 1 34 0 691 161 8 24 chr10 65103961 65104085 -75212680 - FLAM_A SINE Alu -11 122 1 349 265 11 81 chr10 65104088 65104119 -75212646 - L1ME4a LINE L1 -366 5755 5723 1855 174 13 7 chr10 65104119 65104429 -75212336 - AluJo SINE Alu 0 312 1 349 265 11 81 chr10 65104429 65104582 -75212183 - L1ME4a LINE L1 -398 5723 5584 288 236 103 34 chr10 65104617 65104753 -75212012 - L1M2 LINE L1 -694 5462 5327 2187 114 0 10 chr10 65104767 65105065 -75211700 - AluSx SINE Alu -17 295 1 2744 45 0 0 chr10 65105076 65105384 -75211381 - AluY SINE Alu -3 308 1 344 144 0 2 chr10 65106224 65106285 -75210480 - Alu SINE Alu -251 52 1 1888 202 50 22 chr10 65106568 65106747 -75210018 + MSTB LTR MaLR 3 176 -250 2212 130 0 0 chr10 65106747 65107046 -75209719 + AluSx SINE Alu 1 299 -13 1888 202 50 22 chr10 65107046 65107267 -75209498 + MSTB LTR MaLR 176 414 -12 599 193 14 64 chr10 65108282 65108422 -75208343 + FLAM_A SINE Alu 1 133 0 2250 107 0 16 chr10 65109338 65109648 -75207117 - AluSx SINE Alu -7 305 1 1845 112 6 96 chr10 65110968 65111290 -75205475 + AluSg SINE Alu 1 293 -17 364 244 0 13 chr10 65112088 65112166 -75204599 + Charlie1 DNA MER1_type 1 77 -2684 2317 113 3 0 chr10 65112167 65112478 -75204287 - AluSq SINE Alu -1 312 1 2282 230 180 21 chr10 65112544 65112900 -75203865 + Charlie1 DNA MER1_type 86 384 -2377 1216 179 101 30 chr10 65112900 65113168 -75203597 + AluJo SINE Alu 1 287 -25 2282 230 180 21 chr10 65113168 65113647 -75203118 + Charlie1 DNA MER1_type 384 785 -1976 2140 129 3 0 chr10 65113647 65113942 -75202823 - AluSx SINE Alu -12 300 5 2282 230 180 21 chr10 65113942 65113956 -75202809 + Charlie1 DNA MER1_type 785 795 -1966 2191 117 0 0 chr10 65113956 65114255 -75202510 - AluY SINE Alu -12 299 1 2282 230 180 21 chr10 65114255 65114421 -75202344 + Charlie1 DNA MER1_type 795 2580 -181 729 250 6 0 chr10 65114437 65114593 -75202172 + MER20 DNA MER1_type 60 216 -3 676 258 0 0 chr10 65115215 65115374 -75201391 - FRAM SINE Alu -6 160 2 1246 81 0 0 chr10 65115403 65115552 -75201213 - AluSp SINE Alu -35 278 130 275 195 78 109 chr10 65115701 65115829 -75200936 - MIR3 SINE MIR -1 207 84 689 193 0 0 chr10 65115949 65116089 -75200676 + L1M3 LINE L1 5302 5441 -727 341 21 0 21 chr10 65117256 65117303 -75199462 + (TG)n Simple_repeat Simple_repeat 2 47 0 381 22 0 0 chr10 65117930 65117976 -75198789 + (TG)n Simple_repeat Simple_repeat 2 47 0 258 328 17 8 chr10 65118012 65118131 -75198634 - 5S rRNA rRNA 0 121 2 443 288 15 8 chr10 65118393 65118525 -75198240 - L1MC1 LINE L1 0 6333 6201 1635 203 25 34 chr10 65118525 65118880 -75197885 - MER93b LTR ERV1 -17 356 5 1237 179 4 61 chr10 65118906 65119168 -75197597 - AluJb SINE Alu -45 267 21 282 264 39 23 chr10 65119650 65119779 -75196986 + MIR SINE MIR 96 226 -36 1547 128 54 70 chr10 65120635 65120933 -75195832 + AluJb SINE Alu 1 293 -19 182 176 29 0 chr10 65121111 65121145 -75195620 + L2 LINE L2 3185 3219 -94 465 298 147 9 chr10 65121972 65122190 -75194575 + MIR SINE MIR 2 249 -13 653 214 174 0 chr10 65123005 65123183 -75193582 + MER3 DNA MER1_type 1 209 0 26 0 0 0 chr10 65123234 65123260 -75193505 + AT_rich Low_complexity Low_complexity 1 26 0 2737 35 0 13 chr10 65123372 65123687 -75193078 + AluY SINE Alu 1 311 0 183 299 39 13 chr10 65123937 65124014 -75192751 - L2 LINE L2 0 3313 3235 208 337 34 0 chr10 65124181 65124270 -75192495 + MIR SINE MIR 24 115 -93 37 39 0 0 chr10 65125664 65125715 -75191050 + AT_rich Low_complexity Low_complexity 1 51 0 2142 112 30 7 chr10 65126003 65126307 -75190458 - AluSx SINE Alu -1 311 1 183 42 0 0 chr10 65126496 65126520 -75190245 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1114 158 0 0 chr10 65126639 65126803 -75189962 + AluSg/x SINE Alu 132 295 -17 2468 55 0 23 chr10 65127050 65127359 -75189406 + AluY SINE Alu 1 302 -9 229 230 149 11 chr10 65127437 65127524 -75189241 + MIR SINE MIR 107 205 -57 2003 130 49 0 chr10 65127721 65128005 -75188760 - AluSx SINE Alu -14 298 1 253 163 0 0 chr10 65128025 65128068 -75188697 + pTR5 LTR ERV1 1987 2029 -409 276 278 11 0 chr10 65128073 65128163 -75188602 + LTR30 LTR ERV1 553 643 -79 616 144 0 0 chr10 65128165 65128255 -75188510 + pTR5 LTR ERV1 303 392 -2046 * 1298 140 8 62 chr10 65128249 65128447 -75188318 + PABL_A-int LTR ERV1 750 934 -4081 2017 103 43 27 chr10 65128447 65128747 -75188018 - AluSq SINE Alu -8 305 1 1298 140 8 62 chr10 65128747 65128791 -75187974 + PABL_A-int LTR ERV1 934 979 -4036 2105 156 0 0 chr10 65128791 65129099 -75187666 - AluSx SINE Alu -2 310 3 183 159 333 0 chr10 65129229 65129298 -75187467 - MER5C DNA MER1_type -200 124 33 1726 162 50 23 chr10 65129511 65129814 -75186951 - AluSx SINE Alu -1 311 1 1581 150 80 3 chr10 65130002 65130302 -75186463 - L1MA4 LINE L1 -10 6290 5968 488 251 72 18 chr10 65130493 65130660 -75186105 - L1MC4a LINE L1 -1884 5924 5749 1091 196 40 0 chr10 65131678 65131877 -75184888 - MER58A DNA MER1_type -16 208 2 1902 150 14 3 chr10 65132182 65132476 -75184289 + AluSx SINE Alu 1 297 -15 1844 149 0 37 chr10 65134957 65135280 -75181485 - AluJo SINE Alu -1 311 1 1149 244 79 5 chr10 65135395 65135789 -75180976 - L1MC4 LINE L1 -799 7243 6821 5097 68 11 17 chr10 65137654 65138318 -75178447 + SVA Other Other 727 1386 0 656 167 9 0 chr10 65138319 65138427 -75178338 + MER65A LTR ERV1 172 280 -165 1492 203 0 14 chr10 65140379 65140670 -75176095 + AluJo SINE Alu 2 288 -24 2296 94 10 3 chr10 65140785 65141084 -75175681 - AluSc SINE Alu -8 301 1 707 196 8 8 chr10 65142360 65142493 -75174272 - FLAM_A SINE Alu 0 133 1 310 68 17 17 chr10 65142555 65142614 -75174151 + (TG)n Simple_repeat Simple_repeat 2 60 0 1203 225 96 61 chr10 65142625 65143000 -75173765 - MLT1D LTR MaLR 0 593 116 1445 214 73 3 chr10 65143000 65143341 -75173424 - MLT1A1 LTR MaLR 0 365 1 1203 225 96 61 chr10 65143341 65143462 -75173303 - MLT1D LTR MaLR -477 116 1 180 111 0 0 chr10 65143520 65143547 -75173218 + (TA)n Simple_repeat Simple_repeat 2 28 0 2157 103 3 45 chr10 65143908 65144219 -75172546 + AluSx SINE Alu 1 298 -14 2219 118 0 0 chr10 65144236 65144525 -75172240 + AluSp SINE Alu 1 289 -24 1231 168 54 0 chr10 65144626 65144829 -75171936 - AluJo SINE Alu -98 214 1 721 175 8 8 chr10 65144860 65144986 -75171779 + FLAM_C SINE Alu 2 127 -16 23 33 0 0 chr10 65144986 65145016 -75171749 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 65146525 65146545 -75170220 + (TG)n Simple_repeat Simple_repeat 1 20 0 1318 168 20 81 chr10 65146545 65146842 -75169923 - AluJo SINE Alu -33 279 1 21 0 0 0 chr10 65153840 65153861 -75162904 + GC_rich Low_complexity Low_complexity 1 21 0 446 278 183 5 chr10 65154800 65154991 -75161774 - MIR SINE MIR -3 259 35 1686 172 34 57 chr10 65155021 65155238 -75161527 - THE1C LTR MaLR 0 375 168 2010 162 0 0 chr10 65155238 65155542 -75161223 + AluSx SINE Alu 1 304 0 1686 172 34 57 chr10 65155542 65155707 -75161058 - THE1C LTR MaLR -207 168 1 216 0 0 0 chr10 65155753 65155777 -75160988 + (TTA)n Simple_repeat Simple_repeat 2 25 0 351 246 0 55 chr10 65155805 65155915 -75160850 - L1M4 LINE L1 -1761 4385 4282 1926 85 115 7 chr10 65155920 65156190 -75160575 - AluSc SINE Alu -10 299 1 2019 128 26 20 chr10 65156213 65156518 -75160247 - AluSx SINE Alu -2 310 4 207 211 0 0 chr10 65156568 65156606 -75160159 - MIR SINE MIR -9 253 216 182 360 37 59 chr10 65156616 65156752 -75160013 - MIR3 SINE MIR -51 157 25 181 276 214 53 chr10 65156856 65157178 -75159587 - L2 LINE L2 -666 2648 2275 223 296 56 0 chr10 65157600 65157671 -75159094 + L2 LINE L2 3155 3229 -43 257 346 79 14 chr10 65157742 65157956 -75158809 - L2 LINE L2 -1554 1760 1533 2409 90 3 0 chr10 65158062 65158363 -75158402 - AluY SINE Alu -9 302 1 209 343 28 19 chr10 65160356 65160464 -75156301 + L2 LINE L2 868 976 -2338 2324 91 0 19 chr10 65160478 65160786 -75155979 + AluSx SINE Alu 1 302 -10 520 118 0 0 chr10 65161077 65161153 -75155612 - AluS SINE Alu -233 77 2 3181 198 19 9 chr10 65162251 65162300 -75154465 - L1 LINE L1 -1685 4461 4414 201 39 0 0 chr10 65162300 65162326 -75154439 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 3181 198 19 9 chr10 65162326 65162942 -75153823 - L1 LINE L1 -1732 4414 3786 2346 89 0 7 chr10 65162942 65163244 -75153521 - AluSg SINE Alu -10 300 1 3181 198 19 9 chr10 65163244 65163270 -75153495 - L1 LINE L1 -2360 3786 3762 3388 208 23 9 chr10 65163271 65164099 -75152666 + L1 LINE L1 4459 5300 -846 2829 102 9 25 chr10 65164099 65164528 -75152237 + L1PB1 LINE L1 5709 6150 -1 3388 208 23 9 chr10 65164528 65164539 -75152226 + L1 LINE L1 5300 5309 -837 1274 158 5 23 chr10 65164651 65164866 -75151899 - AluJo SINE Alu -15 297 87 588 296 234 20 chr10 65165467 65165869 -75150896 + HAL1 LINE L1 423 910 -1597 278 255 210 32 chr10 65165933 65166305 -75150460 + HAL1 LINE L1 1088 1525 -982 5651 80 20 55 chr10 65166352 65167244 -75149521 + SVA Other Other 6 866 -520 2891 51 27 5 chr10 65167273 65167646 -75149119 + SVA Other Other 635 1015 -371 606 84 12 0 chr10 65167746 65167829 -75148936 + AluY SINE Alu 219 302 -9 201 196 20 0 chr10 65168013 65168064 -75148701 + (TA)n Simple_repeat Simple_repeat 2 53 0 1331 145 5 10 chr10 65168273 65168473 -75148292 + AluJb SINE Alu 1 199 -113 180 0 0 0 chr10 65168491 65168511 -75148254 + (A)n Simple_repeat Simple_repeat 1 20 0 855 186 93 6 chr10 65168530 65168691 -75148074 + FAM SINE Alu 1 175 0 2332 101 3 0 chr10 65168698 65168996 -75147769 + AluSp SINE Alu 1 299 -14 1578 190 23 7 chr10 65169738 65170038 -75146727 + AluJo SINE Alu 1 305 -7 691 247 272 7 chr10 65170039 65170322 -75146443 - L2 LINE L2 0 3313 2956 329 225 146 7 chr10 65170333 65170484 -75146281 - MARNA DNA Mariner -39 547 376 1840 138 32 3 chr10 65170528 65170810 -75145955 + AluJo SINE Alu 1 290 -22 269 309 50 29 chr10 65172007 65172146 -75144619 + MIR SINE MIR 80 221 -41 390 274 22 93 chr10 65173054 65173183 -75143582 + Charlie8 DNA MER1_type 10 118 -2299 2246 114 0 0 chr10 65173183 65173480 -75143285 - AluSx SINE Alu -15 297 1 390 274 22 93 chr10 65173480 65173576 -75143189 + Charlie8 DNA MER1_type 118 219 -2198 2487 61 7 0 chr10 65173781 65174075 -75142690 - AluY SINE Alu -15 296 1 1564 193 118 9 chr10 65174077 65174527 -75142238 + Charlie4a DNA MER1_type 2 500 -8 31 76 0 0 chr10 65175229 65175295 -75141470 + GC_rich Low_complexity Low_complexity 1 66 0 255 31 0 0 chr10 65175731 65175763 -75141002 + (TG)n Simple_repeat Simple_repeat 1 32 0 1523 67 0 0 chr10 65176360 65176540 -75140225 - AluSp SINE Alu -13 300 121 2610 60 27 0 chr10 65176782 65177117 -75139648 - LTR14A LTR ERVK 0 344 1 2292 126 0 0 chr10 65177330 65177639 -75139126 + AluSx SINE Alu 1 309 -3 278 56 0 0 chr10 65179041 65179077 -75137688 + MIR SINE MIR 113 148 -114 286 110 0 20 chr10 65179599 65179655 -75137110 - MER69 DNA AcHobo -28 2498 2444 975 272 196 0 chr10 65181220 65181643 -75135122 - LTR33 LTR ERVL -1 520 15 2168 116 0 0 chr10 65181697 65182021 -75134744 - AluSq SINE Alu 0 324 1 240 35 0 0 chr10 65182088 65182117 -75134648 + (GGA)n Simple_repeat Simple_repeat 2 30 0 282 305 42 0 chr10 65182744 65182839 -75133926 - L1MD3 LINE L1 -57 7938 7840 81 66 0 0 chr10 65182842 65182993 -75133772 + AT_rich Low_complexity Low_complexity 1 151 0 1587 228 45 30 chr10 65182998 65183489 -75133276 - L1MC4a LINE L1 -151 7657 7160 2171 125 7 0 chr10 65183502 65183805 -75132960 + AluSp SINE Alu 1 305 -8 2343 98 3 13 chr10 65183805 65184120 -75132645 + AluSp SINE Alu 1 312 -1 2148 128 10 3 chr10 65184132 65184438 -75132327 + AluSx SINE Alu 1 308 -4 3119 148 20 56 chr10 65184443 65185053 -75131712 - L1MB2 LINE L1 -2 6169 5582 1301 154 28 28 chr10 65185053 65185300 -75131465 - LTR47A LTR ERVL 0 452 206 2323 102 7 0 chr10 65185301 65185604 -75131161 + AluSx SINE Alu 1 305 -7 468 183 54 0 chr10 65185612 65185705 -75131060 - LTR47B LTR ERVL -341 102 5 316 336 218 24 chr10 65185713 65186094 -75130671 + L2 LINE L2 2854 3308 -5 1002 177 0 28 chr10 65186246 65186427 -75130338 - AluJb SINE Alu -17 295 120 442 214 20 0 chr10 65186527 65186625 -75130140 + LTR49-int LTR ERV1 3348 3447 -2884 857 291 4 13 chr10 65186841 65187078 -75129687 - AluJo SINE Alu -77 235 1 1403 218 0 10 chr10 65187645 65187943 -75128822 + AluSg SINE Alu 16 310 0 27 108 0 0 chr10 65188880 65188991 -75127774 + GC_rich Low_complexity Low_complexity 1 111 0 849 189 70 53 chr10 65189138 65189366 -75127399 + MIR SINE MIR 13 244 -18 2256 115 3 3 chr10 65189537 65189849 -75126916 - AluSx SINE Alu 0 312 1 1429 175 4 19 chr10 65190030 65190287 -75126478 + AluJo SINE Alu 42 294 -18 180 0 0 0 chr10 65194490 65194510 -75122255 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1883 145 13 35 chr10 65194730 65194906 -75121859 - AluSx SINE Alu -1 311 133 2075 116 17 10 chr10 65194906 65195208 -75121557 - AluSg1 SINE Alu -5 304 1 2396 106 3 0 chr10 65195212 65195515 -75121250 - AluSp SINE Alu -9 304 1 1883 145 13 35 chr10 65195515 65195651 -75121114 - AluSx SINE Alu -182 130 1 2174 108 10 0 chr10 65195660 65195991 -75120774 - AluSx SINE Alu 0 312 1 2305 106 3 3 chr10 65195991 65196292 -75120473 - AluSq SINE Alu -12 301 1 2331 111 3 3 chr10 65196292 65196599 -75120166 - AluSq SINE Alu -6 307 1 2532 94 0 0 chr10 65197090 65197398 -75119367 - AluSg SINE Alu -2 308 1 1871 122 48 4 chr10 65198835 65199134 -75117631 + AluSx SINE Alu 1 311 0 203 236 11 56 chr10 65199181 65199270 -75117495 + T-rich Low_complexity Low_complexity 1 85 0 1935 165 0 7 chr10 65199677 65199980 -75116785 - AluJo SINE Alu -11 301 1 901 205 6 6 chr10 65200234 65200400 -75116365 + FRAM SINE Alu 1 166 0 394 256 18 98 chr10 65200414 65200578 -75116187 - L1ME3A LINE L1 -51 6119 5969 2164 129 0 7 chr10 65200605 65200908 -75115857 - AluSx SINE Alu -11 301 1 1544 165 24 17 chr10 65200944 65201235 -75115530 + AluJo SINE Alu 1 293 -19 338 206 72 31 chr10 65201304 65201401 -75115364 - L1MC5 LINE L1 -451 7510 7410 561 116 9 45 chr10 65201405 65201422 -75115343 - MER2 DNA MER2_type -150 195 179 1321 106 111 24 chr10 65201422 65201630 -75115135 - MER30 DNA MER1_type -4 226 1 561 116 9 45 chr10 65201630 65201689 -75115076 - MER2 DNA MER2_type -166 179 122 2361 105 0 0 chr10 65201689 65201983 -75114782 + AluSx SINE Alu 1 294 -18 561 116 9 45 chr10 65201983 65202017 -75114748 - MER2 DNA MER2_type -223 122 88 188 273 18 0 chr10 65202019 65202074 -75114691 + L2 LINE L2 2497 2552 -762 512 128 0 75 chr10 65202074 65202168 -75114597 + MER2 DNA MER2_type 1 87 -258 1680 240 65 24 chr10 65202172 65202408 -75114357 - L2 LINE L2 -997 2317 2092 2044 155 3 0 chr10 65202408 65202717 -75114048 + AluSx SINE Alu 1 310 -2 1680 240 65 24 chr10 65202717 65202942 -75113823 - L2 LINE L2 -1222 2092 1837 2459 67 0 7 chr10 65202952 65203249 -75113516 + AluY SINE Alu 1 295 -16 565 262 60 87 chr10 65203261 65203410 -75113355 + L1MEd LINE L1 23 174 -5945 2273 112 0 0 chr10 65203410 65203708 -75113057 - AluSx SINE Alu -16 296 1 565 262 60 87 chr10 65203708 65203972 -75112793 + L1MEd LINE L1 174 427 -5692 559 246 123 78 chr10 65204101 65204385 -75112380 - MER102b DNA MER1_type -1 340 44 829 169 101 0 chr10 65205960 65206108 -75110657 - FRAM SINE Alu -12 164 2 271 193 92 82 chr10 65206111 65206240 -75110525 - MIR SINE MIR -91 117 17 2397 77 0 0 chr10 65206275 65206574 -75110191 - AluSx SINE Alu -13 299 1 280 312 21 0 chr10 65206601 65206694 -75110071 - MIR SINE MIR 0 262 168 208 217 0 0 chr10 65206699 65206745 -75110020 + (ATG)n Simple_repeat Simple_repeat 3 48 0 450 201 149 22 chr10 65206753 65206887 -75109878 - MIR SINE MIR 0 262 112 470 336 150 0 chr10 65207392 65207612 -75109153 - MIR SINE MIR -4 258 6 597 223 7 29 chr10 65207806 65207945 -75108820 - MIR SINE MIR -80 182 47 189 338 14 28 chr10 65208849 65208920 -75107845 + MIR SINE MIR 4 73 -189 911 238 87 64 chr10 65208952 65208980 -75107785 - L2 LINE L2 0 3313 3287 1316 117 226 32 chr10 65208980 65209228 -75107537 + AluSg SINE Alu 1 296 -4 911 238 87 64 chr10 65209228 65209544 -75107221 - L2 LINE L2 -26 3287 2961 2346 77 0 6 chr10 65209548 65209861 -75106904 - AluY SINE Alu 0 311 1 210 297 231 0 chr10 65209864 65209955 -75106810 + MIR SINE MIR 122 233 -29 232 239 0 0 chr10 65212456 65212502 -75104263 + GA-rich Low_complexity Low_complexity 1 46 0 2065 107 24 0 chr10 65214182 65214471 -75102294 - AluSx SINE Alu -16 296 1 2083 139 3 0 chr10 65214877 65215186 -75101579 - AluSx SINE Alu -2 310 1 2460 59 0 0 chr10 65218026 65218329 -75098436 - AluY SINE Alu -8 303 1 288 0 0 0 chr10 65218872 65218904 -75097861 + (A)n Simple_repeat Simple_repeat 1 32 0 1537 191 0 0 chr10 65223362 65223624 -75093141 - AluJb SINE Alu -16 296 35 211 156 89 0 chr10 65223645 65223690 -75093075 + L2 LINE L2 1630 1678 -1636 198 0 0 0 chr10 65223698 65223720 -75093045 + (CA)n Simple_repeat Simple_repeat 1 22 0 950 201 0 18 chr10 65223722 65223941 -75092824 + L1MB8 LINE L1 5721 5935 -243 29 28 0 0 chr10 65224060 65224096 -75092669 + AT_rich Low_complexity Low_complexity 1 36 0 182 245 41 0 chr10 65226602 65226651 -75090114 + L2 LINE L2 3244 3294 -19 2185 99 0 0 chr10 65226774 65227067 -75089698 + AluSx SINE Alu 1 293 -19 519 330 178 21 chr10 65229167 65229732 -75087033 + L2 LINE L2 2615 3270 -2 1638 168 3 54 chr10 65231013 65231329 -75085436 + AluJo SINE Alu 1 300 -12 2069 113 0 16 chr10 65231883 65232192 -75084573 + AluJb SINE Alu 1 304 -8 2072 107 47 7 chr10 65232288 65232588 -75084177 + AluJo SINE Alu 1 312 0 183 182 0 0 chr10 65234859 65234892 -75081873 - MIR SINE MIR -113 149 117 1893 96 66 0 chr10 65235856 65236128 -75080637 + AluSx SINE Alu 1 290 -22 267 248 9 16 chr10 65240396 65240493 -75076272 - MER5B DNA MER1_type 0 189 1 2070 104 16 19 chr10 65240567 65240875 -75075890 + AluSx SINE Alu 1 307 -5 1988 100 0 0 chr10 65241083 65241344 -75075421 - AluSg SINE Alu -49 261 1 21 0 0 0 chr10 65242093 65242114 -75074651 + AT_rich Low_complexity Low_complexity 1 21 0 1031 163 12 0 chr10 65242163 65242329 -75074436 + AluJb SINE Alu 134 301 -11 306 0 0 0 chr10 65242867 65242901 -75073864 + (CA)n Simple_repeat Simple_repeat 2 35 0 2004 82 3 21 chr10 65243002 65243284 -75073481 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 65243288 65243335 -75073430 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 895 272 179 8 chr10 65243556 65243942 -75072823 - Tigger8 DNA MER2_type -53 613 162 205 271 0 0 chr10 65244415 65244463 -75072302 + CT-rich Low_complexity Low_complexity 2 49 0 2308 56 24 0 chr10 65245123 65245411 -75071354 + AluY SINE Alu 1 295 -16 2319 91 0 7 chr10 65246138 65246447 -75070318 - AluSx SINE Alu -1 311 5 268 171 61 61 chr10 65248776 65248858 -75067907 + MIR SINE MIR 111 192 -70 939 287 106 53 chr10 65248955 65249086 -75067679 - L2 LINE L2 -21 3292 3169 1839 154 3 3 chr10 65249086 65249392 -75067373 + AluSx SINE Alu 1 306 -6 939 287 106 53 chr10 65249392 65249440 -75067325 - L2 LINE L2 -144 3169 3125 2213 113 0 0 chr10 65249440 65249742 -75067023 + AluSx SINE Alu 1 302 -10 939 287 106 53 chr10 65249742 65250136 -75066629 - L2 LINE L2 -188 3125 2753 2201 99 0 0 chr10 65250136 65250429 -75066336 + AluSq SINE Alu 3 295 -18 939 287 106 53 chr10 65250429 65250732 -75066033 - L2 LINE L2 -560 2753 2361 801 153 7 15 chr10 65251342 65251479 -75065286 + AluJo SINE Alu 2 137 -175 2275 92 0 10 chr10 65251492 65251627 -75065138 + AluSx SINE Alu 1 136 -176 2342 87 0 6 chr10 65251627 65251938 -75064827 + AluSq SINE Alu 1 309 -4 2275 92 0 10 chr10 65251938 65252108 -75064657 + AluSx SINE Alu 136 303 -9 282 29 0 0 chr10 65252108 65252143 -75064622 + (TA)n Simple_repeat Simple_repeat 1 35 0 237 222 0 0 chr10 65252143 65252188 -75064577 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 65252914 65252947 -75063818 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 419 276 116 25 chr10 65253471 65253670 -75063095 + MIR SINE MIR 8 224 -38 2363 64 3 0 chr10 65255844 65256139 -75060626 + AluY SINE Alu 2 297 -14 185 182 152 0 chr10 65256993 65257059 -75059706 + MIR SINE MIR 79 154 -108 565 338 48 13 chr10 65257722 65257950 -75058815 + MIR SINE MIR 3 238 -24 2334 60 0 10 chr10 65260221 65260519 -75056246 + AluSg SINE Alu 16 310 0 673 248 66 35 chr10 65261067 65261293 -75055472 + MIR SINE MIR 28 260 -2 732 180 8 0 chr10 65261323 65261451 -75055314 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 65261826 65261881 -75054884 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 475 287 60 12 chr10 65263276 65263443 -75053322 + MIR SINE MIR 13 187 -75 393 259 71 18 chr10 65263437 65263549 -75053216 + L2 LINE L2 3194 3311 -2 * 242 200 53 40 chr10 65263540 65263615 -75053150 + MIR SINE MIR 187 262 0 * 1939 118 4 7 chr10 65265347 65265626 -75051139 + AluSx SINE Alu 3 280 -32 1111 175 13 74 chr10 65266776 65267005 -75049760 - MER20 DNA MER1_type -4 215 1 1931 146 7 3 chr10 65267098 65267400 -75049365 + AluJb SINE Alu 1 303 -9 285 310 52 26 chr10 65267835 65267951 -75048814 + MIR3 SINE MIR 86 204 -4 225 317 0 50 chr10 65269741 65269842 -75046923 + MIR3 SINE MIR 107 202 -6 352 335 69 57 chr10 65270766 65271011 -75045754 - L2 LINE L2 0 3272 3025 332 319 110 87 chr10 65271206 65271311 -75045454 - L2 LINE L2 -529 2785 2684 1071 179 12 0 chr10 65271311 65271484 -75045281 + FAM SINE Alu 1 175 0 332 319 110 87 chr10 65271484 65271792 -75044973 - L2 LINE L2 -630 2684 2353 2431 57 17 0 chr10 65271792 65272092 -75044673 - AluY SINE Alu -6 305 1 332 319 110 87 chr10 65272092 65272239 -75044526 - L2 LINE L2 -961 2353 2211 1855 138 3 3 chr10 65272698 65272981 -75043784 + AluSx SINE Alu 14 296 -16 1647 169 30 24 chr10 65273002 65273297 -75043468 + AluJb SINE Alu 1 297 -15 1808 134 35 10 chr10 65274027 65274317 -75042448 + AluSx SINE Alu 1 297 -15 197 281 240 10 chr10 65274435 65274531 -75042234 + L2 LINE L2 3194 3311 -2 302 258 133 33 chr10 65278303 65278423 -75038342 + MIR SINE MIR 21 152 -110 566 251 36 24 chr10 65278457 65278624 -75038141 + MER5B DNA MER1_type 5 173 -5 911 239 33 5 chr10 65278859 65279072 -75037693 - MIR SINE MIR -11 251 33 2137 120 3 0 chr10 65281259 65281568 -75035197 + AluSx SINE Alu 1 310 -2 1551 160 34 20 chr10 65281801 65282095 -75034670 + AluJo SINE Alu 1 298 -14 3107 168 4 0 chr10 65382457 65383011 -74933754 - L1P LINE L1 -1352 4794 4239 4082 232 14 3 chr10 65383700 65384744 -74932021 + L1 LINE L1 4233 5288 -858 1797 205 42 19 chr10 65385060 65385484 -74931281 + MLT1C LTR MaLR 1 434 -33 21 0 0 0 chr10 65385829 65385850 -74930915 + GC_rich Low_complexity Low_complexity 1 21 0 263 274 0 21 chr10 65386138 65386233 -74930532 + L1ME4a LINE L1 5757 5849 -272 232 243 43 0 chr10 65386330 65386400 -74930365 + L1ME4a LINE L1 6005 6077 -44 2368 156 64 12 chr10 65386453 65386858 -74929907 + MSTB LTR MaLR 1 426 0 464 291 89 6 chr10 65387125 65387283 -74929482 - MIR SINE MIR -72 190 20 309 261 0 54 chr10 65388475 65388567 -74928198 + MER103 DNA DNA 35 121 -45 590 271 5 53 chr10 65389257 65389445 -74927320 - MER5A DNA MER1_type 0 189 11 1055 270 0 4 chr10 65389508 65389778 -74926987 + AluSx SINE Alu 35 303 -9 267 339 66 20 chr10 65390347 65390648 -74926117 - LTR16A LTR ERVL -75 375 61 196 276 122 65 chr10 65390952 65391075 -74925690 - MIR3 SINE MIR -70 138 9 424 141 39 167 chr10 65391299 65391334 -74925431 - MER3 DNA MER1_type -40 122 84 2476 81 3 0 chr10 65391334 65391641 -74925124 + AluSp SINE Alu 1 308 -5 424 141 39 167 chr10 65391641 65391659 -74925106 - MER3 DNA MER1_type -78 84 65 1980 151 0 3 chr10 65391659 65391958 -74924807 + AluJb SINE Alu 1 298 -14 424 141 39 167 chr10 65391958 65392059 -74924706 - MER3 DNA MER1_type -97 65 34 195 100 0 0 chr10 65392500 65392530 -74924235 + (CA)n Simple_repeat Simple_repeat 1 30 0 13309 50 3 12 chr10 65392757 65394511 -74922254 + L1P LINE L1 1978 3715 -2431 504 266 51 32 chr10 65394827 65394985 -74921780 + MIR SINE MIR 56 216 -46 370 216 88 64 chr10 65395209 65395334 -74921431 - MIR3 SINE MIR -13 195 68 7960 170 13 31 chr10 65395889 65398549 -74918216 + L1PB1 LINE L1 3544 6151 0 1090 146 0 0 chr10 65398555 65398713 -74918052 + AluSg/x SINE Alu 135 292 -18 195 69 0 0 chr10 65398723 65398752 -74918013 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1961 121 28 3 chr10 65398763 65399052 -74917713 + AluSq SINE Alu 1 296 -17 206 407 25 0 chr10 65399462 65399580 -74917185 + L2 LINE L2 3183 3303 -10 1241 98 37 5 chr10 65400615 65400829 -74915936 - L1MA4 LINE L1 -9 6291 6071 4960 166 45 21 chr10 65400858 65402269 -74914496 - L1PA16 LINE L1 -1 6165 4747 1425 167 7 0 chr10 65402815 65403084 -74913681 - L1MA4 LINE L1 -8 6292 6022 285 226 0 0 chr10 65403085 65403147 -74913618 + L1MA4A LINE L1 5639 5700 -605 * 662 162 0 1 chr10 65403124 65403241 -74913524 - L1P5 LINE L1 -356 5795 5680 281 289 94 39 chr10 65403731 65403911 -74912854 + L1MEd LINE L1 562 751 -5368 29 70 0 0 chr10 65403982 65404039 -74912726 + AT_rich Low_complexity Low_complexity 1 57 0 417 253 102 15 chr10 65404264 65404471 -74912294 + L1ME LINE L1 5587 5808 -360 22 35 0 0 chr10 65404482 65404511 -74912254 + AT_rich Low_complexity Low_complexity 1 29 0 483 253 199 34 chr10 65405008 65405416 -74911349 - L1M4 LINE L1 -2167 3979 3505 498 320 45 22 chr10 65405435 65405794 -74910971 + L1ME LINE L1 5450 5816 -346 25 0 0 0 chr10 65405840 65405865 -74910900 + AT_rich Low_complexity Low_complexity 1 25 0 267 31 0 0 chr10 65406341 65406373 -74910392 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 51 0 0 chr10 65406497 65406536 -74910229 + AT_rich Low_complexity Low_complexity 1 39 0 2421 151 16 38 chr10 65407470 65407913 -74908852 - Tigger2a DNA MER2_type -1 433 1 27 0 0 0 chr10 65408544 65408571 -74908194 + AT_rich Low_complexity Low_complexity 1 27 0 2186 154 22 2 chr10 65408779 65409187 -74907578 - L1MA4A LINE L1 -7 6296 5881 1173 176 10 0 chr10 65409187 65409392 -74907373 + L1MA4A LINE L1 5674 5880 -423 209 307 53 79 chr10 65409404 65409518 -74907247 - MIR SINE MIR -99 163 53 186 256 139 12 chr10 65411298 65411384 -74905381 + L3 LINE CR1 989 1085 -492 322 323 71 0 chr10 65411390 65411489 -74905276 + L2 LINE L2 3163 3268 -4 341 353 124 24 chr10 65411522 65411893 -74904872 + L3 LINE CR1 1113 1520 -57 206 311 210 17 chr10 65411970 65412089 -74904676 - MER5A DNA MER1_type -1 188 47 1352 165 4 20 chr10 65412429 65412684 -74904081 + L1MC1 LINE L1 5980 6230 -103 299 191 73 0 chr10 65412787 65412855 -74903910 + L1MC1 LINE L1 6256 6328 -5 438 275 96 5 chr10 65413049 65413267 -74903498 + L1M4 LINE L1 4471 4708 -1438 1790 104 64 54 chr10 65413545 65413843 -74902922 - AluSq SINE Alu -12 301 1 2076 113 0 13 chr10 65414361 65414661 -74902104 + AluSg SINE Alu 6 301 -9 368 316 7 22 chr10 65415488 65415624 -74901141 + HAL1 LINE L1 1483 1616 -891 719 294 31 22 chr10 65415776 65416099 -74900666 + L1M4 LINE L1 3699 4024 -2122 42099 34 23 1 chr10 65416153 65422129 -74894636 - L1PA3 LINE L1 0 6155 46 353 290 43 7 chr10 65422126 65422264 -74894501 + L1M4 LINE L1 4027 4169 -1977 * 5091 180 32 11 chr10 65422417 65423469 -74893296 - L1 LINE L1 -1895 4251 3177 854 216 0 0 chr10 65423485 65423647 -74893118 - FRAM SINE Alu -22 154 1 2956 97 17 13 chr10 65423664 65424130 -74892635 - L1MA1 LINE L1 -7 7714 7247 343 53 4 0 chr10 65424179 65424239 -74892526 + L1M1 LINE L1 5394 5454 -708 31 44 0 0 chr10 65424253 65424298 -74892467 + AT_rich Low_complexity Low_complexity 1 45 0 291 121 0 7 chr10 65424312 65424368 -74892397 + L1M1 LINE L1 5774 5827 -339 636 136 0 9 chr10 65424371 65424481 -74892284 - L1MA1 LINE L1 -479 7242 7134 * 7922 191 52 6 chr10 65424475 65426218 -74890547 - L1MA1 LINE L1 -1498 6067 4245 * 12773 173 25 53 chr10 65426191 65429655 -74887110 - L1MA1 LINE L1 -3825 3740 15 768 153 8 0 chr10 65429670 65429801 -74886964 - FLAM_C SINE Alu -1 142 11 918 241 46 50 chr10 65429817 65430256 -74886509 - L1 LINE L1 -2972 3174 2738 * 4977 192 32 15 chr10 65430253 65430942 -74885823 + L1MA7 LINE L1 4262 4938 -1353 2761 96 0 0 chr10 65430942 65431306 -74885459 + THE1B LTR MaLR 1 364 0 4977 192 32 15 chr10 65431306 65432615 -74884150 + L1MA7 LINE L1 4938 6291 0 483 293 116 31 chr10 65432895 65433319 -74883446 + L1M4 LINE L1 4892 5351 -795 2703 17 0 0 chr10 65433622 65433924 -74882841 + AluYa5 SINE Alu 1 302 -9 32 0 0 0 chr10 65434259 65434291 -74882474 + AT_rich Low_complexity Low_complexity 1 32 0 195 139 0 0 chr10 65434425 65434461 -74882304 + (CA)n Simple_repeat Simple_repeat 1 36 0 1780 218 16 19 chr10 65434464 65434840 -74881925 - MER82 DNA MER2_type -1 652 278 276 289 114 0 chr10 65435795 65435909 -74880856 - LTR16C LTR ERVL -5 486 360 233 286 0 0 chr10 65435966 65436022 -74880743 - LTR16C LTR ERVL -269 222 167 417 328 75 70 chr10 65436492 65437118 -74879647 - HAL1 LINE L1 -1063 1444 816 1010 213 84 0 chr10 65437806 65438055 -74878710 - L1MC2 LINE L1 -9 6335 6066 39 38 0 0 chr10 65439186 65439239 -74877526 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 65439302 65439323 -74877442 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr10 65439530 65439588 -74877177 + AT_rich Low_complexity Low_complexity 1 58 0 4870 70 31 0 chr10 65439809 65440456 -74876309 + PABL_B LTR ERV1 1 667 0 1680 183 20 59 chr10 65442354 65442763 -74874002 + L1MA7 LINE L1 5890 6282 -9 887 116 55 20 chr10 65443082 65443228 -74873537 - AluSg1 SINE Alu -158 151 1 224 196 147 49 chr10 65443330 65443432 -74873333 - L2 LINE L2 -1 3312 3201 2283 71 30 0 chr10 65443674 65443969 -74872796 + AluY SINE Alu 1 304 -7 418 284 77 18 chr10 65444065 65444234 -74872531 - MER110 LTR ERV1 -7 484 306 553 308 33 56 chr10 65444548 65444850 -74871915 - MER110-int LTR ERV1 0 4647 4353 235 226 15 95 chr10 65445203 65445340 -74871425 - HAL1 LINE L1 -121 2386 2261 358 319 72 53 chr10 65445395 65446076 -74870689 - HAL1 LINE L1 -836 1671 978 228 390 39 32 chr10 65446981 65447135 -74869630 + MIR3 SINE MIR 23 177 -31 5539 168 19 14 chr10 65447254 65448947 -74867818 + L1MA3 LINE L1 4127 5830 -475 15846 182 44 4 chr10 65448956 65453200 -74863565 + L1PB2 LINE L1 1 4415 -2447 2037 191 48 62 chr10 65453200 65453761 -74863004 - MLT2B3 LTR ERVL 0 554 2 260 107 0 160 chr10 65453762 65453837 -74862928 - HERVL-B3 LTR ERVL 0 5654 5592 * 656 135 0 0 chr10 65453832 65453936 -74862829 - HERVL-B3 LTR ERVL -226 5428 5325 189 295 0 64 chr10 65453936 65454014 -74862751 - MIR3 SINE MIR -124 84 12 28780 112 22 3 chr10 65454014 65456004 -74860761 - HERVL LTR ERVL -408 5246 3295 2146 122 3 0 chr10 65456004 65456300 -74860465 + AluSx SINE Alu 1 297 -15 28780 112 22 3 chr10 65456300 65458394 -74858371 - HERVL LTR ERVL -2359 3295 1084 5725 160 9 26 chr10 65458392 65459921 -74856844 + L1PB2 LINE L1 4999 6487 -380 * 423 0 0 0 chr10 65459921 65459968 -74856797 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 5725 160 9 26 chr10 65459968 65460337 -74856428 + L1PB2 LINE L1 6487 6860 -7 3046 117 0 35 chr10 65460733 65461245 -74855520 + L1MA3 LINE L1 5812 6305 0 297 307 57 57 chr10 65461969 65462145 -74854620 - MIR SINE MIR -86 176 1 266 230 9 106 chr10 65462569 65462682 -74854083 - L1ME LINE L1 -5939 131 30 2177 86 0 0 chr10 65463005 65463323 -74853442 - AluSc SINE Alu 0 318 1 4747 142 15 10 chr10 65463773 65464570 -74852195 - L1PA16 LINE L1 0 6166 5366 24 32 0 0 chr10 65464661 65464692 -74852073 + AT_rich Low_complexity Low_complexity 1 31 0 564 329 98 40 chr10 65466317 65466794 -74849971 + MLT1K LTR MaLR 79 583 -5 183 129 0 0 chr10 65466981 65467012 -74849753 + (TG)n Simple_repeat Simple_repeat 2 32 0 234 193 0 0 chr10 65467118 65467175 -74849590 + (TA)n Simple_repeat Simple_repeat 2 58 0 1865 164 0 20 chr10 65468273 65468578 -74848187 - AluSx SINE Alu -13 299 1 1486 231 5 9 chr10 65469393 65469823 -74846942 - MER89 LTR ERV1 -68 491 1 222 185 123 12 chr10 65469948 65470029 -74846736 - MIR SINE MIR -41 221 132 21 36 0 0 chr10 65470186 65470214 -74846551 + AT_rich Low_complexity Low_complexity 1 28 0 185 191 0 21 chr10 65470933 65470980 -74845785 + CT-rich Low_complexity Low_complexity 3 48 0 279 351 0 11 chr10 65470981 65471075 -74845690 - L2 LINE L2 -31 3282 3190 246 361 0 19 chr10 65471117 65471225 -74845540 + MIR SINE MIR 59 164 -98 23 0 0 0 chr10 65471233 65471256 -74845509 + AT_rich Low_complexity Low_complexity 1 23 0 277 294 49 10 chr10 65471470 65471572 -74845193 + MER5C DNA MER1_type 206 311 -13 837 218 32 50 chr10 65471825 65472045 -74844720 + MER20 DNA MER1_type 4 219 0 649 181 118 0 chr10 65472335 65472479 -74844286 + LTR47A LTR ERVL 261 421 -31 297 174 41 102 chr10 65472620 65472718 -74844047 - L2 LINE L2 -1 3312 3221 4939 183 16 29 chr10 65473410 65474242 -74842523 - L1PB4 LINE L1 -2 6154 5313 2102 119 0 0 chr10 65474242 65474535 -74842230 - AluSx SINE Alu -19 293 1 4939 183 16 29 chr10 65474535 65475472 -74841293 - L1PB4 LINE L1 -843 5313 4397 992 246 17 10 chr10 65475452 65475740 -74841025 - L1PB4 LINE L1 -3086 3060 2771 * 25 0 0 0 chr10 65475811 65475836 -74840929 + AT_rich Low_complexity Low_complexity 1 25 0 252 196 20 49 chr10 65476010 65476112 -74840653 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 227 346 38 30 chr10 65476773 65477036 -74839729 + L1MEd LINE L1 860 1124 -4995 195 129 0 0 chr10 65477145 65477176 -74839589 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 333 26 0 chr10 65477225 65477378 -74839387 + HAL1 LINE L1 1474 1630 -877 2110 133 0 0 chr10 65477388 65477690 -74839075 + AluSx SINE Alu 2 303 -9 337 287 31 54 chr10 65478197 65478326 -74838439 + L1MEd LINE L1 2610 2735 -3394 1760 217 83 95 chr10 65478428 65479128 -74837637 + MER61E LTR ERV1 1 565 -4 390 235 84 42 chr10 65479136 65479255 -74837510 - MER58A DNA MER1_type 0 136 13 315 325 43 0 chr10 65479277 65479465 -74837300 + L1MEd LINE L1 2760 2955 -3174 486 265 64 74 chr10 65479468 65479981 -74836784 + L1MC5 LINE L1 6721 7228 -733 870 252 58 33 chr10 65480104 65480588 -74836177 + L1MC5 LINE L1 7262 7757 -204 505 149 53 11 chr10 65480644 65480738 -74836027 + MER4A LTR ERV1 1 98 -566 1750 128 9 25 chr10 65480738 65481089 -74835676 + MER4A LTR ERV1 261 664 0 270 232 0 62 chr10 65481091 65481203 -74835562 + L1MC5 LINE L1 7810 7914 -47 526 309 100 33 chr10 65481219 65481734 -74835031 + L1MEd LINE L1 2938 3491 -2638 604 75 0 0 chr10 65481869 65481949 -74834816 - MADE1 DNA Mariner 0 80 1 267 284 193 24 chr10 65482006 65482260 -74834505 + L1MEd LINE L1 3735 4031 -2098 817 227 68 33 chr10 65482315 65482692 -74834073 + LTR16C LTR ERVL 67 487 -4 25 95 0 0 chr10 65482695 65482769 -74833996 + AT_rich Low_complexity Low_complexity 1 74 0 2152 143 27 14 chr10 65483360 65483730 -74833035 - THE1C LTR MaLR 0 375 1 355 267 26 43 chr10 65483864 65483980 -74832785 + MER5A DNA MER1_type 72 185 -4 21 57 0 0 chr10 65484031 65484066 -74832699 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 65484100 65484121 -74832644 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr10 65484158 65484189 -74832576 + AT_rich Low_complexity Low_complexity 1 31 0 667 227 43 37 chr10 65484931 65485051 -74831714 - MER58A DNA MER1_type -2218 202 79 1860 153 40 35 chr10 65485051 65485424 -74831341 + THE1C LTR MaLR 1 375 0 667 227 43 37 chr10 65485424 65485466 -74831299 - MER58A DNA MER1_type -2341 79 39 1915 145 0 0 chr10 65487073 65487362 -74829403 - AluSx SINE Alu -1 311 23 183 353 0 15 chr10 65487413 65487481 -74829284 - MER5A DNA MER1_type -28 161 95 291 291 13 25 chr10 65488000 65488158 -74828607 + L1MC5 LINE L1 7366 7521 -440 696 233 81 36 chr10 65488203 65488512 -74828253 + L1MC5 LINE L1 7606 7928 -33 221 356 10 29 chr10 65488526 65488630 -74828135 - MER5B DNA MER1_type -69 109 8 27 0 0 0 chr10 65488646 65488673 -74828092 + AT_rich Low_complexity Low_complexity 1 27 0 385 325 54 18 chr10 65489151 65489317 -74827448 - MER5B DNA MER1_type 0 178 7 903 317 49 55 chr10 65489662 65490373 -74826392 - L2 LINE L2 -2 3311 2595 1430 193 55 11 chr10 65490459 65490734 -74826031 + AluJo SINE Alu 1 287 -25 213 136 91 0 chr10 65490743 65490809 -74825956 + (TA)n Simple_repeat Simple_repeat 2 73 0 202 338 15 0 chr10 65491107 65491175 -74825590 - L2 LINE L2 -575 2739 2671 206 265 0 20 chr10 65491215 65491264 -74825501 + L2 LINE L2 2696 2743 -571 381 356 158 4 chr10 65491266 65491519 -74825246 - L2 LINE L2 -701 2613 2322 834 193 27 5 chr10 65491536 65491723 -74825042 - L1MA8 LINE L1 -3 6288 6098 349 379 155 0 chr10 65491724 65492033 -74824732 - L2 LINE L2 -999 2315 1959 326 360 107 4 chr10 65492227 65492480 -74824285 - MLT1J2 LTR MaLR -171 279 1 25 75 0 0 chr10 65492482 65492535 -74824230 + AT_rich Low_complexity Low_complexity 1 53 0 245 206 0 15 chr10 65492848 65492916 -74823849 + (TA)n Simple_repeat Simple_repeat 2 68 0 2390 81 0 3 chr10 65493148 65493456 -74823309 + AluSq SINE Alu 1 307 -6 2201 106 0 3 chr10 65494202 65494494 -74822271 + AluSg SINE Alu 1 291 -19 290 277 0 12 chr10 65494624 65494707 -74822058 + (TA)n Simple_repeat Simple_repeat 2 83 0 270 191 11 34 chr10 65494718 65494807 -74821958 + (TATG)n Simple_repeat Simple_repeat 2 88 0 501 297 95 11 chr10 65495571 65496116 -74820649 + L1ME LINE L1 4961 5544 -618 21 57 0 0 chr10 65496506 65496541 -74820224 + AT_rich Low_complexity Low_complexity 1 35 0 201 283 0 19 chr10 65496556 65496609 -74820156 + L2 LINE L2 3216 3267 -5 2179 98 3 31 chr10 65497035 65497352 -74819413 - AluY SINE Alu -3 308 1 462 194 83 0 chr10 65497438 65497546 -74819219 - MER5C DNA MER1_type -201 123 7 267 286 17 25 chr10 65497580 65497699 -74819066 - LTR33 LTR ERVL -8 513 396 22 0 0 0 chr10 65498246 65498268 -74818497 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr10 65498993 65499031 -74817734 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr10 65500973 65500994 -74815771 + AT_rich Low_complexity Low_complexity 1 21 0 364 293 167 35 chr10 65501041 65501215 -74815550 - LTR16A1 LTR ERVL 0 457 261 227 276 181 0 chr10 65501272 65501377 -74815388 - LTR16A1 LTR ERVL -333 124 1 372 158 183 0 chr10 65501701 65501783 -74814982 - L1MA9 LINE L1 -1 6311 6215 234 363 63 26 chr10 65501829 65502019 -74814746 + L2 LINE L2 2584 2780 -534 412 308 203 6 chr10 65502034 65502216 -74814549 + L2 LINE L2 2108 2325 -989 448 333 161 15 chr10 65502231 65502909 -74813856 + L2 LINE L2 2460 3298 -15 21 0 0 0 chr10 65504110 65504131 -74812634 + AT_rich Low_complexity Low_complexity 1 21 0 4934 165 99 11 chr10 65505714 65506651 -74810114 - LTR28 LTR ERV1 0 1020 1 1927 115 49 0 chr10 65506966 65507253 -74809512 - AluSx SINE Alu -11 301 1 15791 30 0 0 chr10 65507332 65509415 -74807350 - L1P LINE L1 -1659 4487 2404 7434 25 0 1 chr10 65509415 65511067 -74805698 + L1PA3 LINE L1 4533 6183 0 715 318 60 14 chr10 65512147 65512499 -74804266 + L1ME3A LINE L1 5768 6135 -35 306 240 41 82 chr10 65512653 65512849 -74803916 - L1M4 LINE L1 -996 5150 4963 219 297 186 0 chr10 65513558 65513676 -74803089 + L2 LINE L2 3133 3272 0 255 389 28 0 chr10 65514224 65514332 -74802433 + L2 LINE L2 3161 3271 -1 32 0 0 0 chr10 65515063 65515095 -74801670 + AT_rich Low_complexity Low_complexity 1 32 0 46 0 0 0 chr10 65516467 65516513 -74800252 + AT_rich Low_complexity Low_complexity 1 46 0 1009 244 5 0 chr10 65516971 65517192 -74799573 + MIR SINE MIR 3 224 -38 273 128 0 0 chr10 65517221 65517268 -74799497 + (TTA)n Simple_repeat Simple_repeat 2 48 0 187 68 0 68 chr10 65517351 65517395 -74799370 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 455 290 106 70 chr10 65517460 65517801 -74798964 + MLT1H1 LTR MaLR 203 555 0 284 263 83 52 chr10 65518726 65519145 -74797620 + L1ME3 LINE L1 4109 4540 -1606 2110 100 7 3 chr10 65520944 65521267 -74795498 - AluSq SINE Alu 0 324 1 1314 263 106 22 chr10 65521370 65522004 -74794761 + L1ME3 LINE L1 5262 5948 -222 236 313 21 0 chr10 65522149 65522245 -74794520 + L1ME3 LINE L1 6043 6140 -22 225 206 29 29 chr10 65522860 65522928 -74793837 + CT-rich Low_complexity Low_complexity 4 71 0 255 79 0 0 chr10 65523433 65523471 -74793294 + (CA)n Simple_repeat Simple_repeat 2 39 0 1441 188 32 49 chr10 65523645 65523990 -74792775 - MER44D DNA MER2_type 0 609 1 21 0 0 0 chr10 65524070 65524091 -74792674 + AT_rich Low_complexity Low_complexity 1 21 0 842 148 0 0 chr10 65524091 65524213 -74792552 - FLAM_C SINE Alu -21 122 1 194 261 62 15 chr10 65524502 65524567 -74792198 + L2 LINE L2 3023 3090 -182 1059 209 58 15 chr10 65524620 65524949 -74791816 + MER33 DNA MER1_type 1 296 -28 262 226 0 0 chr10 65526604 65526657 -74790108 + L2 LINE L2 3261 3313 0 255 133 0 0 chr10 65526927 65526972 -74789793 + (TTAAA)n Simple_repeat Simple_repeat 5 49 0 218 105 0 88 chr10 65527158 65527215 -74789550 + (TTTTTA)n Simple_repeat Simple_repeat 6 57 0 29 0 0 0 chr10 65527270 65527299 -74789466 + AT_rich Low_complexity Low_complexity 1 29 0 436 255 206 57 chr10 65528811 65529093 -74787672 - MLT1H LTR MaLR -7 542 219 21 0 0 0 chr10 65529673 65529694 -74787071 + AT_rich Low_complexity Low_complexity 1 21 0 577 37 12 12 chr10 65532424 65532505 -74784260 + (TAGA)n Simple_repeat Simple_repeat 3 83 0 717 334 135 6 chr10 65532572 65532992 -74783773 - L2 LINE L2 -215 3098 2624 1506 221 132 52 chr10 65533127 65533566 -74783199 + MLT2B3 LTR ERVL 1 474 -80 2692 226 46 92 chr10 65533594 65533912 -74782853 + ERVL-B3-B1 LTR ERVL 2 333 -5431 240 167 0 0 chr10 65533912 65533954 -74782811 + 5S rRNA rRNA 1 42 -79 2692 226 46 92 chr10 65533954 65534394 -74782371 + ERVL-B3-B1 LTR ERVL 333 764 -5000 4961 209 17 11 chr10 65534437 65535429 -74781336 + ERVL-B3-B1 LTR ERVL 680 1677 -4087 234 139 0 0 chr10 65535454 65535497 -74781268 - L1MA8 LINE L1 -4 6287 6245 23190 133 13 80 chr10 65535507 65540203 -74776562 + L1P LINE L1 12 4393 -1753 369 145 0 14 chr10 65540198 65540267 -74776498 + L1PA7 LINE L1 2861 2928 -3218 * 21 57 0 19 chr10 65540282 65540320 -74776445 + AT_rich Low_complexity Low_complexity 1 39 -13 6878 87 29 0 chr10 65540320 65542058 -74774707 + L1PA7 LINE L1 4397 6150 -4 21 57 0 19 chr10 65542058 65542072 -74774693 + AT_rich Low_complexity Low_complexity 39 52 0 248 132 0 0 chr10 65542073 65542111 -74774654 - L1MA8 LINE L1 -45 6246 6209 3861 196 55 20 chr10 65542113 65542899 -74773866 + ERVL-B3-B1 LTR ERVL 1677 2489 -3275 11296 172 18 35 chr10 65542899 65544979 -74771786 + ERVL-B3-B1 LTR ERVL 3710 5754 -10 1562 221 22 3 chr10 65544982 65545298 -74771467 + MLT2B1 LTR ERVL 1 322 -198 2003 222 41 108 chr10 65545298 65546290 -74770475 + MLT1A1-int LTR MaLR 255 1312 -423 180 0 0 0 chr10 65546290 65546310 -74770455 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 2003 222 41 108 chr10 65546310 65546323 -74770442 + MLT1A1-int LTR MaLR 1312 1324 -411 2272 66 0 3 chr10 65546323 65546611 -74770154 - AluY SINE Alu -24 287 1 2003 222 41 108 chr10 65546611 65546790 -74769975 + MLT1A1-int LTR MaLR 1324 1735 0 1778 188 11 19 chr10 65546790 65547158 -74769607 + MLT1A1 LTR MaLR 1 365 0 782 313 107 10 chr10 65547161 65547471 -74769294 - L2 LINE L2 -970 2344 2005 230 310 35 95 chr10 65548015 65548215 -74768550 - L2 LINE L2 -1378 1936 1749 1506 183 7 21 chr10 65548305 65548589 -74768176 + AluJo SINE Alu 8 287 -25 2140 144 49 0 chr10 65549079 65549426 -74767339 - THE1B LTR MaLR 0 364 1 664 321 149 25 chr10 65550516 65550911 -74765854 - L2 LINE L2 -65 3248 2805 2380 190 79 12 chr10 65551215 65551407 -74765358 - L1MC3 LINE L1 0 7785 7607 2066 113 13 10 chr10 65551407 65551707 -74765058 - AluSx SINE Alu -11 301 1 2380 190 79 12 chr10 65551707 65552073 -74764692 - L1MC3 LINE L1 -178 7607 7190 1843 231 59 7 chr10 65552064 65552519 -74764246 - L1MC3 LINE L1 -1410 6375 5897 * 861 286 134 28 chr10 65552516 65552548 -74764217 - L1MCb LINE L1 -5563 482 455 * 2364 146 35 19 chr10 65552548 65552973 -74763792 - MSTB1 LTR MaLR 0 432 1 861 286 134 28 chr10 65552973 65553374 -74763391 - L1MCb LINE L1 -5590 455 3 23 54 0 0 chr10 65554045 65554082 -74762683 + AT_rich Low_complexity Low_complexity 1 37 0 41 36 0 0 chr10 65554122 65554177 -74762588 + AT_rich Low_complexity Low_complexity 1 55 0 201 74 0 0 chr10 65554764 65554791 -74761974 + (TATAA)n Simple_repeat Simple_repeat 5 31 0 25 31 0 0 chr10 65555809 65555841 -74760924 + AT_rich Low_complexity Low_complexity 1 32 0 293 291 139 13 chr10 65557140 65557291 -74759474 + L1ME LINE L1 5512 5681 -440 306 271 118 32 chr10 65557581 65557861 -74758904 - L1M4 LINE L1 -2869 3277 2974 496 283 103 32 chr10 65557900 65558395 -74758370 - L1M4 LINE L1 -3240 2906 2377 21 0 0 0 chr10 65558735 65558756 -74758009 + AT_rich Low_complexity Low_complexity 1 21 0 1835 155 0 38 chr10 65558941 65559258 -74757507 + AluSx SINE Alu 3 307 -5 269 200 4 9 chr10 65559278 65559341 -74757424 + AluJ/monomer SINE Alu 2 47 -255 424 326 15 15 chr10 65560036 65560168 -74756597 + MER5A DNA MER1_type 7 138 -51 2011 192 81 120 chr10 65560753 65561528 -74755237 - LTR1B LTR ERV1 -81 745 1 5274 64 3 180 chr10 65561540 65562544 -74754221 + LTR12 LTR ERV1 1 826 0 32402 92 7 6 chr10 65562568 65566993 -74749772 + HERV9 LTR ERV1 58 4486 -3913 291 267 56 0 chr10 65567990 65568080 -74748685 - MER103 DNA DNA -69 97 3 23 0 0 0 chr10 65568444 65568467 -74748298 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 65569988 65570017 -74746748 + AT_rich Low_complexity Low_complexity 1 29 0 1858 174 3 7 chr10 65570203 65570513 -74746252 + AluJb SINE Alu 1 309 -3 1150 204 51 131 chr10 65573294 65574093 -74742672 + LTR8A LTR ERV1 1 719 -7 1948 136 9 46 chr10 65574124 65574470 -74742295 - MER1B DNA MER1_type -4 333 1 832 222 91 18 chr10 65574923 65575144 -74741621 + LTR8 LTR ERV1 9 245 -446 592 319 93 61 chr10 65575785 65576256 -74740509 + L1ME2 LINE L1 3998 4452 -1694 2200 90 9 40 chr10 65576256 65576577 -74740188 + AluSq SINE Alu 1 311 -2 592 319 93 61 chr10 65576577 65577296 -74739469 + L1ME2 LINE L1 4452 5234 -912 492 345 30 54 chr10 65577301 65577877 -74738888 + L1ME2 LINE L1 5336 5897 -267 236 171 43 60 chr10 65577891 65578008 -74738757 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 21 36 0 0 chr10 65578757 65578785 -74737980 + AT_rich Low_complexity Low_complexity 1 28 0 22 88 0 0 chr10 65578894 65578951 -74737814 + AT_rich Low_complexity Low_complexity 1 57 0 21 57 0 0 chr10 65579057 65579092 -74737673 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr10 65579168 65579204 -74737561 + AT_rich Low_complexity Low_complexity 1 36 0 1999 136 3 13 chr10 65579915 65580231 -74736534 - AluSq SINE Alu 0 313 1 2889 139 8 110 chr10 65580729 65581364 -74735401 + MER101B LTR ERV1 1 570 0 3520 167 30 5 chr10 65581869 65582528 -74734237 - MER67C LTR ERV1 0 710 35 642 176 24 16 chr10 65582558 65582683 -74734082 - FLAM_C SINE Alu -12 131 6 328 358 70 5 chr10 65583244 65583445 -74733320 + MIR SINE MIR 49 262 0 211 247 140 11 chr10 65583723 65583816 -74732949 + MER5C DNA MER1_type 220 324 0 181 252 165 16 chr10 65583871 65583998 -74732767 - MER5C DNA MER1_type -55 269 124 22 35 0 0 chr10 65584677 65584706 -74732059 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 65585553 65585574 -74731191 + AT_rich Low_complexity Low_complexity 1 21 0 250 303 107 8 chr10 65586850 65586972 -74729793 - MER5C DNA MER1_type -185 139 6 3635 57 2 0 chr10 65587381 65587392 -74729373 + L1P3 LINE L1 5345 5354 -800 2734 68 6 0 chr10 65587392 65587747 -74729018 - L1PA7 LINE L1 -3 6151 5795 3635 57 2 0 chr10 65587747 65588191 -74728574 + L1PA7 LINE L1 5354 5801 -353 1073 133 46 70 chr10 65588567 65588808 -74727957 + L1MB2 LINE L1 5934 6168 -3 756 267 75 53 chr10 65589554 65589914 -74726851 + MLT1J LTR MaLR 1 368 -143 30 77 0 0 chr10 65590124 65590189 -74726576 + AT_rich Low_complexity Low_complexity 1 65 0 279 0 0 0 chr10 65590200 65590231 -74726534 + (TG)n Simple_repeat Simple_repeat 2 32 0 1996 159 16 21 chr10 65590285 65590662 -74726103 + THE1C LTR MaLR 1 375 0 829 292 83 49 chr10 65590892 65591066 -74725699 - HAL1 LINE L1 -228 2279 2112 2127 161 65 24 chr10 65591066 65591482 -74725283 + Tigger2a DNA MER2_type 1 433 -1 829 292 83 49 chr10 65591482 65591899 -74724866 - HAL1 LINE L1 -395 2112 1668 2515 242 26 25 chr10 65591915 65592064 -74724701 - MLT1A1-int LTR MaLR -1079 656 509 2353 88 0 16 chr10 65592064 65592372 -74724393 - AluSg SINE Alu -7 303 1 2515 242 26 25 chr10 65592372 65592874 -74723891 - MLT1A1-int LTR MaLR -1226 509 4 1472 202 101 42 chr10 65592877 65593213 -74723552 - MLT1A1 LTR MaLR 0 365 10 284 232 0 53 chr10 65593227 65593322 -74723443 - HAL1 LINE L1 -1580 927 838 2392 175 16 78 chr10 65594335 65594905 -74721860 + LTR29 LTR ERV1 1 534 -88 3941 167 57 41 chr10 65594905 65595759 -74721006 + MER4D LTR ERV1 1 868 -35 2124 109 26 10 chr10 65595760 65596063 -74720702 + AluSx SINE Alu 1 308 -4 1047 165 0 0 chr10 65596066 65596224 -74720541 + AluSg/x SINE Alu 141 298 -14 593 158 10 0 chr10 65596294 65596395 -74720370 + MER39B LTR ERV1 552 653 0 425 276 98 8 chr10 65597945 65598068 -74718697 - L2 LINE L2 0 3313 3180 3441 136 22 51 chr10 65599106 65600225 -74716540 + L1M1 LINE L1 4714 5787 -518 2400 166 65 109 chr10 65600225 65600432 -74716333 + LTR8A LTR ERV1 1 216 -511 2189 129 10 0 chr10 65600432 65600742 -74716023 + AluSq SINE Alu 1 313 0 2400 166 65 109 chr10 65600742 65601197 -74715568 + LTR8A LTR ERV1 216 634 -93 336 136 15 15 chr10 65601198 65601264 -74715501 + LTR60 LTR ERV1 1 66 -520 1014 259 46 25 chr10 65601385 65601709 -74715056 + LTR43 LTR ERV1 132 462 -140 2959 126 46 2 chr10 65601909 65602408 -74714357 + L1MA3 LINE L1 5783 6303 -2 283 325 18 9 chr10 65602978 65603092 -74713673 - ERVL LTR ERVL -2211 3553 3439 406 312 71 0 chr10 65603238 65603392 -74713373 - ERVL LTR ERVL -2521 3243 3079 852 276 47 24 chr10 65604259 65604680 -74712085 - MSTB2 LTR MaLR -19 438 1 1894 172 48 50 chr10 65604680 65605098 -74711667 - MLT1A1-int LTR MaLR 0 1735 1319 876 200 0 6 chr10 65605103 65605278 -74711487 - MLT1A1-int LTR MaLR -1560 175 2 1273 245 89 22 chr10 65605280 65605651 -74711114 - MSTD LTR MaLR 0 396 1 657 283 133 0 chr10 65605651 65605877 -74710888 - LTR50 LTR ERVL -525 270 15 328 284 0 18 chr10 65606224 65606333 -74710432 - LTR67 LTR ERVL -40 517 411 495 311 44 16 chr10 65607091 65607274 -74709491 - L3 LINE CR1 -39 1538 1351 718 263 115 41 chr10 65607276 65607641 -74709124 - LTR16A LTR ERVL 0 450 59 409 208 0 0 chr10 65607989 65608061 -74708704 - tRNA-Glu-GAG tRNA tRNA -3 72 1 275 327 82 63 chr10 65608077 65608346 -74708419 - L3 LINE CR1 -581 996 723 * 324 194 167 0 chr10 65608319 65608391 -74708374 + L2 LINE L2 3188 3271 -1 579 303 81 0 chr10 65609442 65609640 -74707125 - MIR SINE MIR -32 230 17 2264 122 5 42 chr10 65610070 65610424 -74706341 + L1PA15 LINE L1 5788 6128 -37 2202 150 8 14 chr10 65610424 65610790 -74705975 - THE1B LTR MaLR 0 364 1 2264 122 5 42 chr10 65610790 65610819 -74705946 + L1PA15 LINE L1 6128 6157 -8 387 312 108 6 chr10 65610891 65611048 -74705717 - MIR SINE MIR -27 235 63 271 239 0 0 chr10 65611159 65611226 -74705539 - LTR50 LTR ERVL -2 793 727 657 252 178 26 chr10 65611267 65611839 -74704926 - LTR50 LTR ERVL -45 750 7 245 230 81 14 chr10 65612577 65612651 -74704114 - L2 LINE L2 -10 3303 3225 391 279 85 58 chr10 65612675 65612933 -74703832 + L1M4 LINE L1 3275 3539 -2607 1688 142 6 80 chr10 65613520 65613844 -74702921 - AluJo SINE Alu -6 306 7 1661 252 101 44 chr10 65614417 65615103 -74701662 - MER50 LTR ERV1 0 734 10 1305 213 115 41 chr10 65615275 65615582 -74701183 + LTR2 LTR ERV1 1 349 -100 2227 73 0 13 chr10 65615582 65615883 -74700882 - AluY SINE Alu -14 297 1 1305 213 115 41 chr10 65615883 65615993 -74700772 + LTR2 LTR ERV1 349 449 0 228 150 75 0 chr10 65616243 65616323 -74700442 + (TA)n Simple_repeat Simple_repeat 1 86 0 1000 153 53 9 chr10 65616427 65616655 -74700110 - Charlie5 DNA MER1_type -82 2530 2293 2122 109 7 0 chr10 65616655 65616949 -74699816 + AluSc SINE Alu 1 296 -13 257 137 39 0 chr10 65616949 65617000 -74699765 + GA-rich Low_complexity Low_complexity 1 53 0 400 176 0 0 chr10 65617055 65617129 -74699636 - Charlie5 DNA MER1_type -2503 109 36 706 299 44 32 chr10 65617298 65617549 -74699216 - MIR SINE MIR -1 261 8 694 260 20 36 chr10 65618606 65618802 -74697963 - MIR SINE MIR -7 255 63 7662 89 5 7 chr10 65619494 65620553 -74696212 - MER11C LTR ERVK -14 1057 1 1632 142 0 50 chr10 65620718 65621000 -74695765 + AluSx SINE Alu 1 268 -44 966 245 5 0 chr10 65621084 65621272 -74695493 - Tigger7 DNA MER2_type -522 211 23 635 179 36 0 chr10 65621289 65621401 -74695364 - Tigger7 DNA MER2_type -2140 347 232 28 0 0 0 chr10 65621614 65621642 -74695123 + AT_rich Low_complexity Low_complexity 1 28 0 247 349 14 41 chr10 65621743 65621889 -74694876 - L2 LINE L2 -1 3312 3171 977 324 42 52 chr10 65622354 65622947 -74693818 + L2 LINE L2 1898 2484 -830 1147 240 108 52 chr10 65622952 65623435 -74693330 + L1MC4 LINE L1 6527 7036 -1006 * 2026 233 76 28 chr10 65623432 65624077 -74692688 + L1MC4a LINE L1 7127 7802 -6 954 306 46 35 chr10 65626686 65627208 -74689557 + L1ME2 LINE L1 3673 4200 -1946 1587 232 27 24 chr10 65627210 65627581 -74689184 + MLT2D LTR ERVL 1 375 -39 453 36 0 0 chr10 65627581 65627636 -74689129 + (CA)n Simple_repeat Simple_repeat 2 56 0 1587 232 27 24 chr10 65627636 65627677 -74689088 + MLT2D LTR ERVL 375 414 0 773 243 36 0 chr10 65627677 65627892 -74688873 + L1ME2 LINE L1 5638 5863 -301 577 271 178 16 chr10 65627902 65628223 -74688542 - L2 LINE L2 -256 3057 2687 1293 215 32 32 chr10 65628785 65629125 -74687640 + MLT1D LTR MaLR 1 340 -165 2470 124 0 5 chr10 65629126 65629498 -74687267 - L1P4 LINE L1 -486 5679 5310 909 196 22 6 chr10 65629529 65629708 -74687057 + MLT1D LTR MaLR 324 505 0 377 192 41 0 chr10 65629791 65629864 -74686901 - MER67D LTR ERV1 -438 76 1 22 0 0 0 chr10 65630234 65630256 -74686509 + AT_rich Low_complexity Low_complexity 1 22 0 209 306 157 0 chr10 65630806 65630940 -74685825 - MIR SINE MIR -3 259 105 180 0 0 0 chr10 65631047 65631067 -74685698 + (TTA)n Simple_repeat Simple_repeat 1 20 0 895 253 65 27 chr10 65631538 65631799 -74684966 - MLT1H LTR MaLR -276 273 3 200 128 26 0 chr10 65632130 65632169 -74684596 + A-rich Low_complexity Low_complexity 2 41 0 273 57 0 0 chr10 65635228 65635263 -74681502 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1673 154 3 54 chr10 65635265 65635563 -74681202 - AluSx SINE Alu -29 283 1 717 288 41 36 chr10 65636404 65636623 -74680142 + MIR SINE MIR 11 230 -32 663 261 14 51 chr10 65636661 65636876 -74679889 + MIR SINE MIR 2 208 -54 678 185 25 0 chr10 65637379 65637536 -74679229 + L1MD1 LINE L1 6081 6241 -1 1683 214 24 55 chr10 65637706 65638127 -74678638 - MER74A LTR ERVL -30 528 121 288 304 29 43 chr10 65639279 65639417 -74677348 + MIR SINE MIR 126 261 -1 673 160 0 8 chr10 65639813 65639938 -74676827 + L1MA9 LINE L1 6187 6310 -2 1931 224 99 55 chr10 65639953 65640657 -74676108 + L1MC4 LINE L1 7162 7896 -146 848 129 27 7 chr10 65642603 65642750 -74674015 - L1MA9 LINE L1 0 6312 6163 2516 55 0 3 chr10 65643317 65643629 -74673136 - AluY SINE Alu 0 311 1 209 281 0 35 chr10 65644632 65644689 -74672076 - L2 LINE L2 -15 3298 3244 260 82 0 20 chr10 65644697 65644746 -74672019 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 5785 99 53 3 chr10 65644748 65645616 -74671149 - L1PA11 LINE L1 -10 6164 5254 223 293 24 24 chr10 65645991 65646073 -74670692 + MIR3 SINE MIR 93 174 -34 28 71 0 0 chr10 65646226 65646282 -74670483 + AT_rich Low_complexity Low_complexity 1 56 0 2187 159 74 17 chr10 65647696 65648099 -74668666 + MSTB LTR MaLR 1 426 0 4900 174 39 37 chr10 65648578 65650283 -74666482 - L1PA16 LINE L1 -1 6165 4473 327 216 16 54 chr10 65650556 65650741 -74666024 + (TA)n Simple_repeat Simple_repeat 1 178 0 22 35 0 0 chr10 65650927 65650956 -74665809 + AT_rich Low_complexity Low_complexity 1 29 0 306 272 76 76 chr10 65651108 65651266 -74665499 + L3 LINE CR1 1305 1462 -115 369 315 27 20 chr10 65652216 65652362 -74664403 - MER5A DNA MER1_type 0 189 43 227 391 35 9 chr10 65652382 65652497 -74664268 + MER5A DNA MER1_type 44 161 -28 265 392 81 29 chr10 65654053 65654326 -74662439 - L2 LINE L2 -556 2758 2472 239 281 0 0 chr10 65655150 65655214 -74661551 - MER94 DNA DNA -54 80 17 * 595 248 41 7 chr10 65655212 65655357 -74661408 + MLT1A2 LTR MaLR 225 374 0 280 336 75 22 chr10 65655609 65655743 -74661022 - MIR SINE MIR -119 143 3 341 358 29 7 chr10 65658301 65658438 -74658327 + MER5A DNA MER1_type 48 187 -2 21 89 0 0 chr10 65658774 65658830 -74657935 + AT_rich Low_complexity Low_complexity 1 56 0 2182 117 50 8 chr10 65659968 65660327 -74656438 - THE1C LTR MaLR 0 375 2 277 188 130 0 chr10 65660549 65660618 -74656147 + L1ME1 LINE L1 5389 5466 -700 689 205 0 0 chr10 65660636 65660753 -74656012 + FLAM_C SINE Alu 7 123 -20 1728 252 65 11 chr10 65660770 65661290 -74655475 + L1ME1 LINE L1 5466 6013 -153 23 0 0 0 chr10 65661538 65661561 -74655204 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 65661798 65661820 -74654945 + AT_rich Low_complexity Low_complexity 1 22 0 221 183 21 54 chr10 65661861 65661954 -74654811 + (TA)n Simple_repeat Simple_repeat 2 91 0 29 47 0 0 chr10 65662179 65662222 -74654543 + AT_rich Low_complexity Low_complexity 1 43 0 229 263 18 0 chr10 65662341 65662398 -74654367 + GA-rich Low_complexity Low_complexity 3 60 0 2060 135 6 3 chr10 65662497 65662808 -74653957 + AluSx SINE Alu 1 312 0 22 0 0 0 chr10 65662991 65663013 -74653752 + AT_rich Low_complexity Low_complexity 1 22 0 1824 129 21 0 chr10 65663255 65663535 -74653230 + MER7A DNA MER2_type 15 298 -48 241 167 95 0 chr10 65663603 65663645 -74653120 + MER7A DNA MER2_type 291 336 0 2075 119 20 10 chr10 65663830 65664125 -74652640 + AluSx SINE Alu 3 300 -12 183 42 0 0 chr10 65664171 65664195 -74652570 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1071 172 5 0 chr10 65664767 65664959 -74651806 + L1PB1 LINE L1 3 195 -6668 9456 156 36 29 chr10 65664964 65667787 -74648978 + L1PB1 LINE L1 636 3643 -3219 2024 140 0 0 chr10 65667787 65668079 -74648686 + AluSx SINE Alu 5 296 -16 9456 156 36 29 chr10 65668079 65668165 -74648600 + L1PB1 LINE L1 3643 3727 -3135 536 105 254 9 chr10 65668190 65668304 -74648461 - MER4C LTR ERV1 -24 441 300 1191 152 142 52 chr10 65668365 65668675 -74648090 - MER4A LTR ERV1 -322 342 5 9619 194 18 21 chr10 65668679 65670108 -74646657 + L1PB1 LINE L1 3723 5140 -1727 180 0 0 0 chr10 65670108 65670128 -74646637 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 9619 194 18 21 chr10 65670128 65671493 -74645272 + L1PB1 LINE L1 5140 6508 -359 180 219 0 0 chr10 65671493 65671534 -74645231 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1793 143 42 31 chr10 65671535 65671893 -74644872 + L1PB1 LINE L1 6499 6860 -7 328 222 205 8 chr10 65672321 65672438 -74644327 - MLT1E1 LTR MaLR -514 140 1 2180 94 0 0 chr10 65672689 65672977 -74643788 - AluSq SINE Alu -7 306 19 216 280 172 0 chr10 65673731 65673824 -74642941 + MIR3 SINE MIR 67 175 -33 269 333 128 36 chr10 65674789 65674984 -74641781 - L2 LINE L2 -512 2802 2590 798 166 17 50 chr10 65675060 65675241 -74641524 + FRAM SINE Alu 1 174 -2 1640 171 28 0 chr10 65675396 65675683 -74641082 - AluJb SINE Alu -15 297 3 197 125 0 62 chr10 65676018 65676066 -74640699 + (T)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 65677031 65677053 -74639712 + AT_rich Low_complexity Low_complexity 1 22 0 1605 199 0 11 chr10 65677054 65677336 -74639429 - AluJo SINE Alu -31 281 3 1107 162 4 60 chr10 65677511 65677646 -74639119 + L1MA4A LINE L1 6052 6166 -137 1923 166 27 0 chr10 65677646 65677942 -74638823 + AluJb SINE Alu 1 304 -8 1107 162 4 60 chr10 65677942 65678071 -74638694 + L1MA4A LINE L1 6166 6301 -2 258 363 102 6 chr10 65678174 65678331 -74638434 - MER5A DNA MER1_type -11 178 7 2234 83 4 0 chr10 65678478 65678756 -74638009 - AluY SINE Alu -32 279 1 1234 249 88 41 chr10 65678911 65679418 -74637347 - MLT1E3 LTR MaLR -5 619 95 244 328 61 8 chr10 65679470 65679601 -74637164 + L2 LINE L2 3172 3309 -4 355 310 109 18 chr10 65679798 65680072 -74636693 + L1ME1 LINE L1 1280 1434 -4950 766 304 35 5 chr10 65680143 65680511 -74636254 + L1ME1 LINE L1 3711 4089 -2293 9507 189 45 11 chr10 65680511 65682412 -74634353 + L1MA4 LINE L1 1 1836 -4646 1508 193 56 0 chr10 65682412 65682704 -74634061 + AluJb SINE Alu 1 307 0 9507 189 45 11 chr10 65682704 65684945 -74631820 + L1MA4 LINE L1 1836 6471 -11 27 29 0 0 chr10 65684945 65684979 -74631786 + AT_rich Low_complexity Low_complexity 1 34 0 3424 242 40 64 chr10 65685033 65685193 -74631572 + L1ME1 LINE L1 4099 4261 -2145 2070 138 39 30 chr10 65685193 65685554 -74631211 + THE1B LTR MaLR 1 364 0 3424 242 40 64 chr10 65685554 65686752 -74630013 + L1ME1 LINE L1 4261 5486 -920 3821 9 0 0 chr10 65686752 65687186 -74629579 - L1PA2 LINE L1 -3 6152 5719 3424 242 40 64 chr10 65687186 65687315 -74629450 + L1ME1 LINE L1 5486 5539 -867 2108 54 0 4 chr10 65687315 65687575 -74629190 + AluY SINE Alu 46 304 -7 3424 242 40 64 chr10 65687575 65687760 -74629005 + L1ME1 LINE L1 5539 5727 -679 1088 270 77 66 chr10 65688090 65688726 -74628039 + L1ME1 LINE L1 5737 6379 -23 380 229 6 112 chr10 65688590 65688769 -74627996 + L1MA10 LINE L1 6411 6570 0 * 310 306 134 11 chr10 65689455 65689641 -74627124 + L1ME2 LINE L1 1192 1400 -4996 623 165 26 0 chr10 65689643 65689758 -74627007 + FAM SINE Alu 35 152 -33 680 279 35 35 chr10 65689774 65690106 -74626659 + L1ME2 LINE L1 1385 1719 -4677 195 42 0 0 chr10 65690106 65690130 -74626635 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 680 279 35 35 chr10 65690130 65690166 -74626599 + L1ME2 LINE L1 1718 1753 -4643 2126 280 60 38 chr10 65690284 65691684 -74625081 + L1ME2 LINE L1 2063 3453 -2762 405 254 63 11 chr10 65691703 65691892 -74624873 + L1ME2 LINE L1 5199 5397 -818 368 276 35 9 chr10 65691890 65692124 -74624641 + L1ME2 LINE L1 5784 6067 -166 * 875 164 22 38 chr10 65692187 65692370 -74624395 + L1MC1 LINE L1 5908 6087 -246 1165 198 5 0 chr10 65692424 65692631 -74624134 + L1MC1 LINE L1 6081 6288 -45 1932 39 0 0 chr10 65693348 65693582 -74623183 + L1PA4 LINE L1 5911 6144 -11 510 268 81 20 chr10 65694027 65694225 -74622540 + LTR33 LTR ERVL 5 214 -307 389 284 142 0 chr10 65694254 65694444 -74622321 + LTR33 LTR ERVL 305 521 0 659 296 28 16 chr10 65695993 65696246 -74620519 - MIR SINE MIR 0 262 7 570 351 22 9 chr10 65696957 65697179 -74619586 + MIR SINE MIR 33 257 -5 32 0 0 0 chr10 65697343 65697375 -74619390 + AT_rich Low_complexity Low_complexity 1 32 0 366 325 46 16 chr10 65698261 65698455 -74618310 + MLT1L LTR MaLR 360 559 -56 828 167 0 0 chr10 65698795 65698927 -74617838 + FLAM_C SINE Alu 1 132 -11 21 71 0 0 chr10 65699445 65699487 -74617278 + AT_rich Low_complexity Low_complexity 1 42 0 863 289 90 22 chr10 65700113 65700469 -74616296 + L2 LINE L2 2934 3313 0 350 355 30 58 chr10 65702700 65703238 -74613527 + L1ME LINE L1 10 532 -5538 502 327 73 14 chr10 65703378 65703733 -74613032 + L1ME LINE L1 520 895 -5175 3843 128 10 10 chr10 65703733 65703847 -74612918 - Tigger1 DNA MER2_type -218 2200 2087 2086 120 0 52 chr10 65703847 65704023 -74612742 - AluSx SINE Alu -3 309 156 2306 70 0 3 chr10 65704023 65704357 -74612408 - AluY SINE Alu 0 311 1 2086 120 0 52 chr10 65704357 65704506 -74612259 - AluSx SINE Alu -156 156 1 3843 128 10 10 chr10 65704506 65704995 -74611770 - Tigger1 DNA MER2_type -330 2088 1597 396 66 33 0 chr10 65704979 65705040 -74611725 - Tigger1 DNA MER2_type -1733 685 623 * 1847 165 38 105 chr10 65705148 65705265 -74611500 - Tigger1 DNA MER2_type -1998 420 297 1779 152 40 17 chr10 65705265 65705567 -74611198 + AluSx SINE Alu 1 309 -3 1847 165 38 105 chr10 65705567 65705842 -74610923 - Tigger1 DNA MER2_type -2121 297 59 2302 103 0 0 chr10 65705842 65706144 -74610621 + AluSp SINE Alu 1 302 -11 1847 165 38 105 chr10 65706144 65706199 -74610566 - Tigger1 DNA MER2_type -2359 59 2 2397 49 0 0 chr10 65707201 65707486 -74609279 - AluY SINE Alu -26 285 1 209 146 0 49 chr10 65707487 65707528 -74609237 - L2 LINE L2 -13 3300 3262 21 0 0 0 chr10 65707710 65707731 -74609034 + AT_rich Low_complexity Low_complexity 1 21 0 230 320 80 0 chr10 65709207 65709307 -74607458 - MIR3 SINE MIR -1 207 100 23 0 0 0 chr10 65709334 65709357 -74607408 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 65710164 65710187 -74606578 + AT_rich Low_complexity Low_complexity 1 23 0 698 227 0 26 chr10 65710477 65710631 -74606134 + FRAM SINE Alu 20 169 -7 895 190 6 0 chr10 65711007 65711170 -74605595 + L1M3 LINE L1 5538 5701 -479 225 0 0 0 chr10 65711793 65711818 -74604947 + (CA)n Simple_repeat Simple_repeat 2 26 0 2099 264 26 40 chr10 65712162 65712921 -74603844 + L1M4 LINE L1 3283 4031 -2115 388 275 95 26 chr10 65713206 65713395 -74603370 + L1M4 LINE L1 5261 5462 -716 223 182 0 0 chr10 65713513 65713557 -74603208 + A-rich Low_complexity Low_complexity 2 45 0 1873 143 36 0 chr10 65713822 65714123 -74602642 - AluSx SINE Alu 0 312 1 232 379 56 30 chr10 65716420 65716618 -74600147 - MIR SINE MIR -28 234 32 821 203 0 0 chr10 65716806 65716978 -74599787 - AluJb SINE Alu 0 306 135 189 175 0 0 chr10 65716981 65717021 -74599744 + A-rich Low_complexity Low_complexity 1 40 0 6375 139 47 7 chr10 65717134 65718231 -74598534 - Tigger3b DNA MER2_type 0 1231 91 1726 209 137 87 chr10 65718250 65719065 -74597700 - LTR1B LTR ERV1 0 1020 1 526 215 0 0 chr10 65719066 65719159 -74597606 - Tigger3b DNA MER2_type -1138 93 1 369 0 0 0 chr10 65719202 65719243 -74597522 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr10 65719560 65719585 -74597180 + AT_rich Low_complexity Low_complexity 1 25 0 241 372 91 33 chr10 65719614 65719888 -74596877 - L2 LINE L2 -172 3100 2811 241 366 84 14 chr10 65720845 65720987 -74595778 + MIR SINE MIR 36 187 -75 231 156 44 0 chr10 65720987 65721032 -74595733 - Tigger1 DNA MER2_type -1213 1205 1159 25 0 0 0 chr10 65721273 65721298 -74595467 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr10 65721326 65721358 -74595407 + AT_rich Low_complexity Low_complexity 1 32 0 289 296 50 20 chr10 65721546 65721745 -74595020 - L1MC/D LINE L1 -2346 5462 5258 269 287 44 88 chr10 65722549 65722685 -74594080 + MIR3 SINE MIR 13 142 -66 2362 222 44 41 chr10 65722862 65723523 -74593242 - L1ME2 LINE L1 -38 6195 5533 983 261 128 55 chr10 65723567 65724684 -74592081 - L1ME2 LINE L1 -1604 4611 3414 725 252 58 107 chr10 65724712 65724936 -74591829 - L1ME2 LINE L1 -4333 2063 1830 2335 100 0 0 chr10 65724936 65725245 -74591520 + AluSg SINE Alu 1 309 -1 725 252 58 107 chr10 65725245 65725588 -74591177 - L1ME2 LINE L1 -4566 1830 1524 1034 247 49 98 chr10 65725666 65726197 -74590568 - MLT1D LTR MaLR 0 505 1 2077 164 44 36 chr10 65726199 65726676 -74590089 - L1MDa LINE L1 -4214 2326 1846 3004 201 137 171 chr10 65727336 65728014 -74588751 - L1MDa LINE L1 -4710 1830 1130 777 224 55 55 chr10 65728014 65728088 -74588677 + MLT1D LTR MaLR 1 74 -431 258 32 0 0 chr10 65728088 65728119 -74588646 + (CA)n Simple_repeat Simple_repeat 2 32 0 777 224 55 55 chr10 65728119 65728281 -74588484 + MLT1D LTR MaLR 73 237 -268 3004 201 137 171 chr10 65728281 65729261 -74587504 - L1MDa LINE L1 -5410 1130 1 2098 119 0 10 chr10 65729602 65729928 -74586837 + AluSx SINE Alu 1 312 0 399 312 23 17 chr10 65730003 65730176 -74586589 - MIR SINE MIR 0 262 89 419 216 74 47 chr10 65731799 65731947 -74584818 - MER97b DNA MER1_type? -874 179 28 366 285 73 22 chr10 65732133 65732270 -74584495 - MLT2E LTR ERVL -453 175 32 965 165 176 84 chr10 65732454 65732727 -74584038 + AluJo SINE Alu 1 298 -14 203 296 0 0 chr10 65732829 65732883 -74583882 + CT-rich Low_complexity Low_complexity 6 59 0 453 341 77 47 chr10 65733159 65733692 -74583073 - L1MD2 LINE L1 -530 5829 5281 1882 189 85 16 chr10 65733709 65734143 -74582622 + MLT1C LTR MaLR 4 467 0 21 57 0 0 chr10 65734265 65734300 -74582465 + AT_rich Low_complexity Low_complexity 1 35 0 2206 106 0 3 chr10 65734364 65734665 -74582100 - AluSg1 SINE Alu -9 300 1 232 283 50 44 chr10 65734796 65734955 -74581810 - L1MD2 LINE L1 -1500 4646 4487 288 213 0 25 chr10 65735156 65735236 -74581529 + (TA)n Simple_repeat Simple_repeat 1 78 0 639 335 52 7 chr10 65735417 65735724 -74581041 + LTR16C LTR ERVL 171 491 0 470 324 22 27 chr10 65736408 65736630 -74580135 - HAL1b LINE L1 -756 592 372 249 269 45 0 chr10 65737489 65737556 -74579209 + MIR3 SINE MIR 91 160 -48 653 88 10 0 chr10 65737805 65737907 -74578858 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 1618 200 0 13 chr10 65739848 65740153 -74576612 - AluJo SINE Alu -11 301 1 236 348 0 0 chr10 65741384 65741466 -74575299 + MLT1H1 LTR MaLR 23 136 -419 459 275 135 21 chr10 65741652 65741845 -74574920 + MLT1H1 LTR MaLR 322 536 -19 343 197 0 0 chr10 65742066 65742137 -74574628 - L1MB4 LINE L1 -3 6177 6107 * 792 177 191 20 chr10 65742106 65742350 -74574415 - L1MB5 LINE L1 -36 6138 5839 1638 235 88 5 chr10 65742638 65743059 -74573706 + MLT2B1 LTR ERVL 1 456 -64 248 145 0 87 chr10 65743090 65743159 -74573606 - L1MC4 LINE L1 -1339 6703 6641 285 95 24 0 chr10 65743170 65743212 -74573553 + MLT2B1 LTR ERVL 478 520 0 270 202 0 45 chr10 65745125 65745214 -74571551 + (TATAA)n Simple_repeat Simple_repeat 3 87 0 192 77 0 0 chr10 65745873 65745899 -74570866 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 416 318 49 28 chr10 65746775 65747081 -74569684 + MLT1H LTR MaLR 64 417 -138 1627 305 82 13 chr10 65747096 65748139 -74568626 + L1MEc LINE L1 1046 2160 -4236 1369 178 12 0 chr10 65748153 65748400 -74568365 + L1PB4 LINE L1 5907 6156 0 406 243 108 45 chr10 65748407 65748518 -74568247 - L2 LINE L2 -24 3289 3172 2013 128 3 0 chr10 65749202 65749500 -74567265 + AluSx SINE Alu 1 299 -13 29 47 0 0 chr10 65749510 65749553 -74567212 + AT_rich Low_complexity Low_complexity 1 43 0 502 176 24 0 chr10 65749697 65749782 -74566983 + MER70A LTR ERVL 386 472 0 4598 182 34 24 chr10 65749791 65750938 -74565827 + L1M2 LINE L1 4336 5501 -772 391 260 87 7 chr10 65750987 65751137 -74565628 - LTR50 LTR ERVL -154 641 480 484 268 167 0 chr10 65751255 65751423 -74565342 - LTR50 LTR ERVL -593 202 7 1832 243 47 40 chr10 65751815 65752321 -74564444 - MLT2B1 LTR ERVL 0 520 59 1481 143 0 4 chr10 65752321 65752552 -74564213 + AluSg/x SINE Alu 71 300 -12 1832 243 47 40 chr10 65752552 65752612 -74564153 - MLT2B1 LTR ERVL -461 59 1 1476 254 116 34 chr10 65754218 65755028 -74561737 - L1MCa LINE L1 -3215 3211 2326 558 283 78 31 chr10 65755121 65755506 -74561259 - L1MCa LINE L1 -5151 1265 863 258 389 47 0 chr10 65755955 65756104 -74560661 - L1MCa LINE L1 -6051 556 401 1017 222 0 30 chr10 65757631 65757861 -74558904 - MER58A DNA MER1_type -1 223 1 180 0 0 0 chr10 65758114 65758134 -74558631 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 1413 165 4 50 chr10 65758140 65758401 -74558364 - AluJo SINE Alu -30 282 34 22 35 0 0 chr10 65759242 65759271 -74557494 + AT_rich Low_complexity Low_complexity 1 29 0 665 325 94 40 chr10 65759594 65760018 -74556747 - LTR16B LTR ERVL -15 449 3 25 53 0 18 chr10 65760096 65760127 -74556638 + AT_rich Low_complexity Low_complexity 1 32 -24 1489 225 3 0 chr10 65760127 65760416 -74556349 + AluJb SINE Alu 1 290 -22 25 53 0 18 chr10 65760416 65760441 -74556324 + AT_rich Low_complexity Low_complexity 32 56 0 681 337 29 8 chr10 65760728 65760974 -74555791 + MIR SINE MIR 11 261 -1 243 355 65 0 chr10 65761584 65761708 -74555057 - L2 LINE L2 0 3313 3182 6069 156 14 14 chr10 65762060 65763164 -74553601 - L1P LINE L1 -2784 3362 2259 12201 130 8 1 chr10 65763164 65765873 -74550892 + L1PA10 LINE L1 3434 6155 -13 291 279 36 45 chr10 65766163 65766274 -74550491 - L2 LINE L2 -867 2447 2338 1584 145 119 0 chr10 65767225 65767494 -74549271 + AluSq SINE Alu 1 301 -12 513 307 26 8 chr10 65768225 65768358 -74548407 + L1MD3 LINE L1 7722 7851 -144 7195 50 0 3 chr10 65768358 65769422 -74547343 - L1PA5 LINE L1 -4 6150 5090 513 307 26 8 chr10 65769422 65769555 -74547210 + L1MD3 LINE L1 7851 7993 -2 399 281 47 0 chr10 65769618 65769746 -74547019 + LTR16A LTR ERVL 30 163 -287 7195 179 153 26 chr10 65769748 65771306 -74545459 - MER52A LTR ERV1 0 1755 1 280 296 114 8 chr10 65771416 65771548 -74545217 + LTR16A LTR ERVL 290 435 -15 252 254 14 0 chr10 65772440 65772511 -74544254 - L1ME3A LINE L1 -78 6092 6021 666 121 0 0 chr10 65772516 65772615 -74544150 - FRAM SINE Alu -38 138 40 673 229 0 8 chr10 65772623 65772754 -74544011 - FLAM_A SINE Alu -3 130 1 454 145 0 0 chr10 65772754 65772823 -74543942 + MLT1D LTR MaLR 437 505 0 264 299 97 44 chr10 65772910 65773177 -74543588 - L2 LINE L2 -314 2999 2720 190 380 62 0 chr10 65773419 65773548 -74543217 + L2 LINE L2 2619 2755 -559 349 150 0 192 chr10 65773579 65773699 -74543066 + MER96B DNA MER1_type? 4 100 -317 3226 213 43 11 chr10 65773699 65774403 -74542362 - L1MB7 LINE L1 -12 6172 5447 364 210 74 0 chr10 65774404 65774485 -74542280 - Tigger5 DNA MER2_type 0 2323 2237 397 217 60 0 chr10 65774493 65774576 -74542189 + Tigger5 DNA MER2_type 1 88 -2235 230 254 0 17 chr10 65774594 65774653 -74542112 - Tigger5 DNA MER2_type -1 2322 2265 815 181 12 0 chr10 65774705 65774914 -74541851 - L1MB7 LINE L1 -742 5436 5225 22 0 0 0 chr10 65774979 65775001 -74541764 + AT_rich Low_complexity Low_complexity 1 22 0 1051 178 42 17 chr10 65775002 65775243 -74541522 - L1MA9 LINE L1 -7 6305 6059 2349 98 3 0 chr10 65775270 65775577 -74541188 + AluSp SINE Alu 1 308 -5 402 312 100 13 chr10 65776194 65776534 -74540231 + MLT1J2 LTR MaLR 49 443 -7 371 363 56 13 chr10 65776535 65776769 -74539996 + ERVL LTR ERVL 2237 2480 -3284 2093 142 51 17 chr10 65776799 65777151 -74539614 - THE1B LTR MaLR 0 364 1 206 103 0 26 chr10 65777403 65777442 -74539323 + (TAA)n Simple_repeat Simple_repeat 3 40 0 657 269 118 35 chr10 65778439 65778836 -74537929 + MER57B LTR ERV1 1 430 -4 338 231 188 0 chr10 65778939 65779056 -74537709 + MER103 DNA DNA 20 158 -8 1906 158 7 0 chr10 65779387 65779678 -74537087 + AluSx SINE Alu 1 293 -19 28512 131 12 57 chr10 65779690 65780071 -74536694 + L1PA8 LINE L1 12 409 -5763 397 0 19 19 chr10 65780071 65780125 -74536640 + (TTG)n Simple_repeat Simple_repeat 2 55 0 28512 131 12 57 chr10 65780125 65783665 -74533100 + L1PA8 LINE L1 409 3521 -2651 2257 110 0 3 chr10 65783665 65783964 -74532801 - AluSx SINE Alu -14 298 1 28512 131 12 57 chr10 65783964 65786501 -74530264 + L1PA8 LINE L1 3521 6170 -2 526 325 12 6 chr10 65787207 65787373 -74529392 + MER5B DNA MER1_type 12 178 0 226 289 177 33 chr10 65787433 65787565 -74529200 + MER5B DNA MER1_type 12 189 0 245 369 0 12 chr10 65787741 65787825 -74528940 + MIR SINE MIR 33 115 -93 219 329 35 25 chr10 65788311 65788461 -74528304 + MIR SINE MIR 16 164 -71 335 261 7 123 chr10 65788591 65788729 -74528036 - L2 LINE L2 0 3272 3151 347 337 70 61 chr10 65788881 65789360 -74527405 - L2 LINE L2 -238 3034 2550 216 270 135 0 chr10 65789378 65789452 -74527313 + L2 LINE L2 3171 3254 -18 294 298 91 8 chr10 65789463 65789584 -74527181 - L3 LINE CR1 -154 1423 1293 306 0 0 0 chr10 65789593 65789627 -74527138 + (CA)n Simple_repeat Simple_repeat 2 35 0 326 130 0 0 chr10 65789712 65789766 -74526999 + MLT2B1 LTR ERVL 467 520 0 277 345 21 14 chr10 65789871 65790016 -74526749 - MIR SINE MIR -38 224 79 1983 168 69 24 chr10 65790367 65790901 -74525864 - MLT2A2 LTR ERVL 0 554 1 606 311 129 56 chr10 65790975 65791735 -74525030 - L2 LINE L2 -256 3057 2246 243 88 0 0 chr10 65793019 65793053 -74523712 + (A)n Simple_repeat Simple_repeat 1 34 0 293 137 40 40 chr10 65793710 65793885 -74522880 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 531 98 92 0 chr10 65793848 65794011 -74522754 + (TA)n Simple_repeat Simple_repeat 2 179 0 379 161 33 44 chr10 65794057 65794237 -74522528 + (CATA)n Simple_repeat Simple_repeat 3 180 0 * 623 105 80 0 chr10 65794206 65794538 -74522227 + (TA)n Simple_repeat Simple_repeat 1 358 0 529 288 8 0 chr10 65794936 65795054 -74521711 - MER5B DNA MER1_type -59 119 1 349 326 150 33 chr10 65795115 65795594 -74521171 - L2 LINE L2 -739 2575 2041 292 334 65 76 chr10 65796144 65796500 -74520265 - L2 LINE L2 -1597 1717 1366 1851 124 52 7 chr10 65796735 65797025 -74519740 + AluSx SINE Alu 1 303 -9 22 70 0 0 chr10 65798921 65798964 -74517801 + AT_rich Low_complexity Low_complexity 1 43 0 770 230 12 12 chr10 65799238 65799403 -74517362 - FRAM SINE Alu 0 166 2 303 310 31 54 chr10 65800554 65800683 -74516082 - L2 LINE L2 0 3313 3188 26 30 0 0 chr10 65801899 65801932 -74514833 + AT_rich Low_complexity Low_complexity 1 33 0 681 224 62 0 chr10 65802543 65802735 -74514030 - L1MA10 LINE L1 -19 6315 6112 3557 119 3 42 chr10 65802769 65803366 -74513399 - MER4B LTR ERV1 -36 574 1 2819 197 87 50 chr10 65803368 65803422 -74513343 - L1MA9 LINE L1 -202 6110 6059 2304 114 0 16 chr10 65803422 65803737 -74513028 - AluSx SINE Alu -2 310 1 2819 197 87 50 chr10 65803737 65804501 -74512264 - L1MA9 LINE L1 -253 6059 5262 332 309 83 39 chr10 65804736 65804917 -74511848 + MIR SINE MIR 54 242 -20 27 0 0 0 chr10 65804966 65804993 -74511772 + AT_rich Low_complexity Low_complexity 1 27 0 29 0 0 0 chr10 65805344 65805373 -74511392 + AT_rich Low_complexity Low_complexity 1 29 0 2632 165 50 0 chr10 65805756 65806260 -74510505 - L1MA9 LINE L1 0 6312 5784 5813 123 37 6 chr10 65806264 65807230 -74509535 - Tigger3b DNA MER2_type -6 1225 230 435 197 13 0 chr10 65807223 65807299 -74509466 - Tigger3b DNA MER2_type -1154 77 1 * 1262 160 27 57 chr10 65807346 65807609 -74509156 - L1MA9 LINE L1 -521 5791 5537 1571 215 61 41 chr10 65807824 65808265 -74508500 + MLT1C LTR MaLR 8 457 -10 800 307 44 7 chr10 65808720 65808994 -74507771 - LTR33 LTR ERVL -237 284 1 213 321 0 0 chr10 65811344 65811397 -74505368 + MIR SINE MIR 90 142 -66 1728 207 131 67 chr10 65811527 65812209 -74504556 + MER50 LTR ERV1 10 734 0 229 333 90 0 chr10 65812269 65812380 -74504385 - MIR SINE MIR -68 140 20 763 169 0 29 chr10 65813357 65813493 -74503272 + AluJo SINE Alu 3 134 -178 2379 67 3 3 chr10 65813560 65813857 -74502908 + AluY SINE Alu 1 297 -14 315 325 90 77 chr10 65813866 65814254 -74502511 + L1ME4a LINE L1 5718 6110 -11 379 279 66 46 chr10 65815318 65815515 -74501250 - MIR SINE MIR -12 250 50 207 69 0 0 chr10 65815589 65815618 -74501147 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 508 324 25 42 chr10 65815622 65815863 -74500902 + L2 LINE L2 2296 2532 -782 27 49 0 0 chr10 65816560 65816601 -74500164 + AT_rich Low_complexity Low_complexity 1 41 0 411 21 0 0 chr10 65817400 65817448 -74499317 + (CA)n Simple_repeat Simple_repeat 2 49 0 418 286 46 42 chr10 65817670 65817929 -74498836 - MIR SINE MIR 0 262 3 2053 136 108 8 chr10 65819162 65819551 -74497214 - MSTA LTR MaLR 0 428 1 2445 70 0 3 chr10 65819631 65819943 -74496822 - AluY SINE Alu 0 311 1 198 373 53 0 chr10 65820069 65820144 -74496621 - MIR SINE MIR -71 137 59 277 330 67 74 chr10 65820775 65821583 -74495182 + L2 LINE L2 2390 3222 -50 257 315 43 0 chr10 65821753 65821845 -74494920 - L2 LINE L2 -1360 1954 1859 406 232 9 18 chr10 65821973 65822085 -74494680 + L1MA10 LINE L1 6222 6332 -2 299 326 65 36 chr10 65822113 65822251 -74494514 - MIR SINE MIR -116 146 5 2146 163 36 5 chr10 65824163 65824690 -74492075 - LTR69 LTR ERVL -4 584 1 27 0 0 0 chr10 65825424 65825451 -74491314 + AT_rich Low_complexity Low_complexity 1 27 0 855 337 119 11 chr10 65825631 65826200 -74490565 - L2 LINE L2 -665 2649 2019 202 271 34 17 chr10 65826253 65826312 -74490453 - L2 LINE L2 -1332 1982 1923 633 257 149 12 chr10 65826315 65826556 -74490209 + L1MEd LINE L1 6 279 -5840 180 0 0 0 chr10 65826953 65826973 -74489792 + (CA)n Simple_repeat Simple_repeat 1 20 0 1336 181 4 44 chr10 65827211 65827460 -74489305 + MER8 DNA MER2_type 1 239 0 22 56 0 0 chr10 65827662 65827698 -74489067 + AT_rich Low_complexity Low_complexity 1 36 0 4153 172 12 3 chr10 65828751 65829489 -74487276 + Tigger2 DNA MER2_type 2 746 -1972 1611 109 44 4 chr10 65829557 65829805 -74486960 + Tigger2 DNA MER2_type 2461 2718 0 1380 125 0 5 chr10 65830117 65830309 -74486456 + AluSx SINE Alu 1 191 -121 709 316 26 13 chr10 65830506 65830737 -74486028 - MIR SINE MIR 0 262 29 1366 256 109 42 chr10 65830831 65831115 -74485650 + MER92C LTR ERV1 23 287 -267 1933 207 61 35 chr10 65831115 65831607 -74485158 + MLT1D LTR MaLR 1 505 0 1366 256 109 42 chr10 65831607 65831818 -74484947 + MER92C LTR ERV1 287 551 -3 615 258 74 11 chr10 65832229 65832322 -74484443 + MER31-int LTR ERV1 1028 1114 -3822 1741 138 85 6 chr10 65832322 65832640 -74484125 + MER2 DNA MER2_type 1 343 -1 615 258 74 11 chr10 65832640 65832817 -74483948 + MER31-int LTR ERV1 1114 1315 -3621 416 217 25 64 chr10 65832831 65832939 -74483826 + MER31-int LTR ERV1 1286 1388 -3548 2265 110 0 0 chr10 65832939 65833240 -74483525 + AluSc SINE Alu 2 302 -7 416 217 25 64 chr10 65833240 65833288 -74483477 + MER31-int LTR ERV1 1388 1436 -3500 1995 91 0 8 chr10 65833469 65833734 -74483031 - AluSg SINE Alu -1 309 47 1933 249 60 62 chr10 65833735 65835052 -74481713 + MER31-int LTR ERV1 1709 3066 -1870 205 274 14 82 chr10 65835203 65835276 -74481489 + MER5A DNA MER1_type 35 102 -87 21 36 0 0 chr10 65835451 65835479 -74481286 + AT_rich Low_complexity Low_complexity 1 28 0 1640 213 63 82 chr10 65835597 65836272 -74480493 + MER31-int LTR ERV1 3330 3808 -1128 4428 46 2 0 chr10 65836272 65836813 -74479952 - L1PA7 LINE L1 -6 6148 5607 1640 213 63 82 chr10 65836813 65836901 -74479864 + MER31-int LTR ERV1 3808 3896 -1040 493 58 0 46 chr10 65836952 65837039 -74479726 - L1PA7 LINE L1 -90 6064 5982 * 873 63 0 2 chr10 65837037 65837162 -74479603 + L1PA7 LINE L1 5864 5986 -169 503 222 52 0 chr10 65837162 65837297 -74479468 + MER31-int LTR ERV1 3972 4113 -823 210 266 47 47 chr10 65837311 65837375 -74479390 + L2 LINE L2 3209 3272 0 183 313 88 12 chr10 65837408 65837488 -74479277 - L2 LINE L2 -5 3267 3182 2786 0 0 0 chr10 65838528 65838825 -74477940 + AluYa5 SINE Alu 1 297 -14 2052 97 28 16 chr10 65840649 65841044 -74475721 - LTR7 LTR ERV1 0 450 1 1987 121 0 14 chr10 65842750 65843032 -74473733 + AluSx SINE Alu 4 281 -31 472 147 29 0 chr10 65844398 65844500 -74472265 + T-rich Low_complexity Low_complexity 3 107 0 268 49 16 115 chr10 65844704 65844765 -74472000 - HSMAR1 DNA Mariner -1232 55 1 284 357 69 30 chr10 65845129 65845490 -74471275 + L2 LINE L2 2355 2729 -585 847 291 51 6 chr10 65845518 65845831 -74470934 - L1ME3A LINE L1 -293 5877 5551 417 340 120 10 chr10 65846897 65847106 -74469659 + MIR SINE MIR 24 255 -7 21 36 0 0 chr10 65847165 65847193 -74469572 + AT_rich Low_complexity Low_complexity 1 28 0 1905 126 0 4 chr10 65847298 65847567 -74469198 + AluSg SINE Alu 24 291 -19 290 277 0 12 chr10 65847697 65847780 -74468985 + (TA)n Simple_repeat Simple_repeat 2 83 0 270 191 11 34 chr10 65847791 65847880 -74468885 + (TATG)n Simple_repeat Simple_repeat 2 88 0 321 347 40 6 chr10 65848644 65848967 -74467798 + L1M4 LINE L1 4961 5294 -852 29 70 0 0 chr10 65949050 65949107 -74367658 + AT_rich Low_complexity Low_complexity 1 57 0 206 275 0 8 chr10 65949655 65949786 -74366979 + (TA)n Simple_repeat Simple_repeat 2 131 0 211 292 92 0 chr10 65950404 65950469 -74366296 - L2 LINE L2 -532 2782 2712 180 341 67 34 chr10 65950497 65950676 -74366089 - L2 LINE L2 -1993 1321 1137 394 273 43 14 chr10 65951077 65951216 -74365549 - L1MC5 LINE L1 -54 7907 7765 29 0 0 0 chr10 65951238 65951267 -74365498 + AT_rich Low_complexity Low_complexity 1 29 0 405 54 0 0 chr10 65951317 65951373 -74365392 + (TC)n Simple_repeat Simple_repeat 1 56 0 238 338 0 0 chr10 65952110 65952187 -74364578 - MIR SINE MIR -116 146 70 21 71 0 0 chr10 65953073 65953115 -74363650 + AT_rich Low_complexity Low_complexity 1 42 0 385 303 133 18 chr10 65953121 65953286 -74363479 - MIR SINE MIR -56 206 23 327 49 0 0 chr10 65953698 65953739 -74363026 + (TG)n Simple_repeat Simple_repeat 2 42 0 236 30 30 0 chr10 65954422 65954455 -74362310 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr10 65954552 65954581 -74362184 + AT_rich Low_complexity Low_complexity 1 29 0 439 235 176 75 chr10 65955599 65955678 -74361087 - L1M4 LINE L1 -1317 4829 4759 2054 130 42 33 chr10 65955678 65956039 -74360726 + THE1B LTR MaLR 1 364 0 439 235 176 75 chr10 65956039 65956333 -74360432 - L1M4 LINE L1 -1387 4759 4418 723 248 81 30 chr10 65956402 65956907 -74359858 + LTR28 LTR ERV1 1 1300 -23 1404 109 0 0 chr10 65957196 65957399 -74359366 + AluSg/x SINE Alu 99 301 0 326 340 57 3 chr10 65957859 65958141 -74358624 - L1ME LINE L1 -288 5833 5537 3958 180 19 21 chr10 65958850 65959596 -74357169 + Tigger7 DNA MER2_type 12 755 -1732 732 299 142 29 chr10 65959900 65960519 -74356246 + L2 LINE L2 2603 3309 -4 433 236 27 9 chr10 65960818 65960928 -74355837 - MIR SINE MIR -37 225 114 1178 223 39 34 chr10 65960989 65961344 -74355421 - L1ME1 LINE L1 -5 6161 5805 484 174 11 11 chr10 65961495 65961587 -74355178 + LTR49 LTR ERV1 504 595 0 644 333 40 30 chr10 65961623 65962026 -74354739 - L1MEc LINE L1 -5968 428 22 24 85 0 0 chr10 65962282 65962341 -74354424 + AT_rich Low_complexity Low_complexity 1 59 0 5063 72 21 48 chr10 65962417 65963180 -74353585 + MER4E LTR ERV1 2 743 -23 257 192 46 92 chr10 65963559 65963689 -74353076 - L1MC5 LINE L1 -931 7030 6907 346 276 104 15 chr10 65963689 65963823 -74352942 - LTR16B LTR ERVL 0 464 319 1336 308 55 35 chr10 65964101 65964725 -74352040 - HERV16 LTR ERVL -2658 2338 1703 539 201 104 31 chr10 65964807 65965008 -74351757 + MLT1E1 LTR MaLR 45 272 -376 270 229 33 0 chr10 65966223 65966284 -74350481 - MER94 DNA DNA 0 134 72 21 0 0 0 chr10 65967367 65967388 -74349377 + AT_rich Low_complexity Low_complexity 1 21 0 1388 231 77 14 chr10 65967917 65968479 -74348286 - MER114 LTR ERV 0 648 52 26 101 0 0 chr10 65968742 65968831 -74347934 + AT_rich Low_complexity Low_complexity 1 89 0 217 348 67 15 chr10 65970021 65970156 -74346609 + MIR SINE MIR 12 153 -109 1517 223 198 16 chr10 65972658 65973097 -74343668 - LTR53 LTR ERVL 0 519 1 373 250 10 10 chr10 65973627 65973723 -74343042 - MER77 LTR ERV1 -6 599 504 45 45 0 0 chr10 65973829 65973895 -74342870 + AT_rich Low_complexity Low_complexity 1 66 0 348 83 0 0 chr10 65975368 65975416 -74341349 + (A)n Simple_repeat Simple_repeat 1 48 0 195 100 0 0 chr10 65977186 65977216 -74339549 + (CA)n Simple_repeat Simple_repeat 1 30 0 1758 306 29 16 chr10 65977454 65978081 -74338684 + L1MCc LINE L1 17 651 -5772 382 97 42 0 chr10 65978340 65978412 -74338353 + CT-rich Low_complexity Low_complexity 5 79 0 1101 264 81 38 chr10 65978431 65979165 -74337600 - L1MCc LINE L1 -4851 1571 1104 2296 89 0 0 chr10 65979220 65979562 -74337203 + AluY SINE Alu 1 342 0 814 273 130 45 chr10 65979564 65979942 -74336823 - LTR16A1 LTR ERVL -41 416 7 316 336 71 18 chr10 65980281 65980394 -74336371 + MIR SINE MIR 34 141 -67 22 35 0 0 chr10 65980802 65980831 -74335934 + AT_rich Low_complexity Low_complexity 1 29 0 895 291 67 42 chr10 65981000 65981406 -74335359 + LTR33 LTR ERVL 41 456 -65 188 185 19 0 chr10 65981507 65981561 -74335204 + (CATA)n Simple_repeat Simple_repeat 4 58 0 1065 275 81 63 chr10 65981883 65982206 -74334559 + HAL1 LINE L1 557 873 -1634 183 42 0 0 chr10 65982206 65982230 -74334535 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1065 275 81 63 chr10 65982230 65982995 -74333770 + HAL1 LINE L1 873 1737 -770 310 263 65 68 chr10 65983095 65983388 -74333377 + L1M4 LINE L1 4172 4463 -1683 2819 222 22 24 chr10 65983395 65984066 -74332699 + Tigger6a DNA MER2_type 1 670 -413 2745 106 142 183 chr10 65984174 65985666 -74331099 - pTR5 LTR ERV1 0 2606 1524 339 25 0 0 chr10 65986453 65986493 -74330272 + (CAT)n Simple_repeat Simple_repeat 2 41 0 436 295 36 0 chr10 65986525 65986664 -74330101 - MIR SINE MIR -30 232 89 224 340 93 0 chr10 65986696 65986793 -74329972 - MIR SINE MIR -155 107 2 248 313 20 82 chr10 65986842 65986989 -74329776 + MIR3 SINE MIR 66 203 -5 325 376 62 19 chr10 65987742 65987904 -74328861 - MER91A DNA MER1_type -26 170 2 198 0 0 0 chr10 65990228 65990250 -74326515 + (A)n Simple_repeat Simple_repeat 1 22 0 231 323 21 109 chr10 65991965 65992157 -74324608 + L2 LINE L2 253 427 -2887 439 301 9 0 chr10 65992286 65992399 -74324366 - MER81 DNA DNA 0 114 1 331 343 118 22 chr10 65992521 65992877 -74323888 + L2 LINE L2 1985 2374 -940 2220 157 11 13 chr10 65993196 65993573 -74323192 - MLT2D LTR ERVL -38 376 1 199 325 72 12 chr10 65993833 65993916 -74322849 + L2 LINE L2 3208 3295 -18 21 0 0 0 chr10 65993974 65993995 -74322770 + AT_rich Low_complexity Low_complexity 1 21 0 259 309 60 0 chr10 65996077 65996161 -74320604 + L2 LINE L2 3180 3268 -4 643 268 48 6 chr10 65996924 65997092 -74319673 + MER8 DNA MER2_type 1 175 -64 289 225 14 14 chr10 65997127 65997198 -74319567 - Tigger2 DNA MER2_type -2645 73 3 191 340 0 0 chr10 65997900 65997950 -74318815 - MIR SINE MIR -123 85 36 356 304 35 0 chr10 65997977 65998092 -74318673 + MIR SINE MIR 22 140 -122 245 262 182 56 chr10 65998290 65998504 -74318261 + Tigger8 DNA MER2_type 169 409 -257 2270 109 0 0 chr10 65998883 65999176 -74317589 + AluSx SINE Alu 1 293 -19 407 331 54 35 chr10 66000319 66000579 -74316186 + L3 LINE CR1 1303 1567 -10 365 227 57 0 chr10 66000622 66000710 -74316055 - MLT1H1 LTR MaLR 0 555 463 320 253 12 12 chr10 66001002 66001085 -74315680 - MLT1F LTR MaLR -459 83 1 341 318 128 10 chr10 66001574 66001769 -74314996 - MIR SINE MIR -3 259 42 200 224 15 0 chr10 66002102 66002169 -74314596 + (TAG)n Simple_repeat Simple_repeat 1 68 0 223 315 45 22 chr10 66002458 66002547 -74314218 + L2 LINE L2 3199 3289 -24 2210 174 28 16 chr10 66002771 66003195 -74313570 + MSTB1 LTR MaLR 1 429 -3 1073 227 42 9 chr10 66003473 66003777 -74312988 + MLT2D LTR ERVL 65 479 -41 342 194 0 0 chr10 66003802 66003874 -74312891 + (TA)n Simple_repeat Simple_repeat 2 73 0 254 264 0 22 chr10 66003921 66004012 -74312753 + L1MC4 LINE L1 6614 6702 -1340 362 83 0 0 chr10 66004038 66004086 -74312679 + MLT2D LTR ERVL 367 414 0 767 228 136 9 chr10 66004087 66004315 -74312450 + ERVL-D LTR ERVL 2 258 -5506 620 209 91 4 chr10 66004332 66004618 -74312147 + MER93b LTR ERV1 21 362 -11 723 253 11 26 chr10 66004677 66004867 -74311898 + ERVL-D LTR ERVL 3076 3262 -2502 * 8696 181 14 15 chr10 66004863 66005379 -74311386 + ERVL-D LTR ERVL 3864 4379 -1385 8074 58 3 1 chr10 66005379 66006346 -74310419 - LTR5 LTR ERVK 0 969 1 8696 181 14 15 chr10 66006346 66007389 -74309376 + ERVL-D LTR ERVL 4379 5420 -344 315 0 0 0 chr10 66007391 66007426 -74309339 + (TG)n Simple_repeat Simple_repeat 2 36 0 2206 93 0 0 chr10 66007527 66007805 -74308960 - AluY SINE Alu -33 278 1 2424 159 14 16 chr10 66007808 66008243 -74308522 - Tigger2a DNA MER2_type 0 434 1 1683 186 18 15 chr10 66008243 66008576 -74308189 + ERVL-D LTR ERVL 5431 5764 0 756 201 86 6 chr10 66008422 66008596 -74308169 + Ricksha DNA DNA 185 372 -882 * 916 236 25 25 chr10 66008596 66008833 -74307932 + MLT2D LTR ERVL 82 318 -96 207 0 0 0 chr10 66009680 66009703 -74307062 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5569 127 20 20 chr10 66010329 66011296 -74305469 - MER11C LTR ERVK -14 1057 1 2790 132 54 17 chr10 66011604 66012082 -74304683 - MER7C DNA MER2_type -1 601 106 227 217 0 0 chr10 66012143 66012189 -74304576 + (TA)n Simple_repeat Simple_repeat 1 46 0 428 77 0 0 chr10 66013466 66013534 -74303231 + MER34C LTR ERV1 12 98 -463 969 106 0 0 chr10 66013553 66013685 -74303080 + AluYb8 SINE Alu 1 132 -186 1390 200 79 83 chr10 66013692 66014056 -74302709 + MER34 LTR ERV1 82 445 -97 2445 125 14 8 chr10 66014056 66014425 -74302340 + THE1C LTR MaLR 4 374 -1 1390 200 79 83 chr10 66014425 66014515 -74302250 + MER34 LTR ERV1 445 534 -8 371 231 17 26 chr10 66014550 66014667 -74302098 + LTR33 LTR ERVL 386 501 -20 25 0 0 0 chr10 66014856 66014881 -74301884 + AT_rich Low_complexity Low_complexity 1 25 0 1267 178 70 49 chr10 66014908 66015195 -74301570 + MSTD LTR MaLR 104 396 0 319 371 0 0 chr10 66015206 66015322 -74301443 + L2 LINE L2 3138 3253 -19 4683 89 38 16 chr10 66016208 66016890 -74299875 + MER4E LTR ERV1 3 699 -67 1949 266 22 33 chr10 66017382 66018013 -74298752 + MLT1E2 LTR MaLR 3 626 0 354 430 25 13 chr10 66018019 66018335 -74298430 + L1MEc LINE L1 888 1207 -5931 2164 137 0 0 chr10 66018495 66018802 -74297963 + AluSx SINE Alu 6 312 0 361 275 83 33 chr10 66018849 66019184 -74297581 + L1MEc LINE L1 1331 1711 -5236 435 185 0 0 chr10 66019490 66019582 -74297183 + GA-rich Low_complexity Low_complexity 2 93 0 785 248 42 61 chr10 66019717 66019979 -74296786 + MLT1E LTR MaLR 337 593 0 249 396 10 5 chr10 66019985 66020079 -74296686 - MIR SINE MIR -62 146 57 2186 55 3 71 chr10 66020079 66020390 -74296375 - AluY SINE Alu -1 310 21 249 396 10 5 chr10 66020390 66020434 -74296331 - MIR SINE MIR -151 57 15 2366 93 0 0 chr10 66020466 66020777 -74295988 - AluY SINE Alu 0 311 1 281 284 31 55 chr10 66020786 66020913 -74295852 - MIR SINE MIR -13 249 126 2020 172 5 32 chr10 66021105 66021477 -74295288 - THE1B LTR MaLR 0 364 3 11104 104 17 1 chr10 66021479 66023033 -74293732 - THE1B-int LTR MaLR 0 1580 1 2221 139 8 32 chr10 66023033 66023406 -74293359 - THE1B LTR MaLR 0 364 1 30 59 0 0 chr10 66023578 66023629 -74293136 + AT_rich Low_complexity Low_complexity 1 51 0 2484 43 7 3 chr10 66023820 66024122 -74292643 - AluY SINE Alu -8 303 1 3391 111 2 64 chr10 66024347 66024924 -74291841 - L1PB1 LINE L1 0 6151 5611 14144 102 16 17 chr10 66025163 66027256 -74289509 + L1PA6 LINE L1 465 2555 -3591 822 88 9 0 chr10 66027260 66027373 -74289392 + L1P LINE L1 3988 4101 -2045 21133 68 0 2 chr10 66027373 66030968 -74285797 + L1PA6 LINE L1 2554 6151 -3 36 0 0 0 chr10 66031471 66031507 -74285258 + AT_rich Low_complexity Low_complexity 1 36 0 31 102 0 0 chr10 66031709 66031817 -74284948 + AT_rich Low_complexity Low_complexity 1 108 0 25 0 0 0 chr10 66031940 66031965 -74284800 + AT_rich Low_complexity Low_complexity 1 25 0 3073 76 0 0 chr10 66032398 66032806 -74283959 - L1PA4 LINE L1 -4 6151 5744 796 76 42 0 chr10 66032906 66033024 -74283741 + MER4E LTR ERV1 644 766 0 2196 106 3 3 chr10 66033323 66033616 -74283149 + AluSc SINE Alu 4 296 -13 272 364 7 7 chr10 66034286 66034429 -74282336 + L1ME LINE L1 7 149 -5921 413 319 95 31 chr10 66034664 66035021 -74281744 + LTR34 LTR ERV1 317 696 -3 326 374 61 52 chr10 66035270 66035580 -74281185 + L1ME LINE L1 185 497 -5573 1492 252 108 51 chr10 66035704 66036597 -74280168 + L1ME LINE L1 529 1463 -4617 1546 191 18 11 chr10 66036597 66036879 -74279886 + AluJb SINE Alu 11 294 -18 1492 252 108 51 chr10 66036879 66037030 -74279735 + L1ME LINE L1 1463 1604 -4476 503 288 7 14 chr10 66037152 66037298 -74279467 - MER58B DNA MER1_type 0 341 197 1424 248 69 4 chr10 66037356 66037849 -74278916 + L1ME LINE L1 2096 2620 -3460 2163 230 58 99 chr10 66037872 66038028 -74278737 + L1ME LINE L1 2998 3159 -2921 2241 83 3 59 chr10 66038028 66038352 -74278413 + AluY SINE Alu 1 306 -5 2163 230 58 99 chr10 66038352 66039047 -74277718 + L1ME LINE L1 3159 3769 -2311 1975 136 0 11 chr10 66039047 66039374 -74277391 - AluSq SINE Alu 0 324 1 2163 230 58 99 chr10 66039374 66039979 -74276786 + L1ME LINE L1 3769 4397 -1683 1430 224 21 9 chr10 66039986 66040316 -74276449 + Tigger6 DNA MER2_type 1 334 -749 21 71 0 0 chr10 66040848 66040890 -74275875 + AT_rich Low_complexity Low_complexity 1 42 0 1098 208 89 53 chr10 66041024 66041385 -74275380 - MLT1A2 LTR MaLR 0 374 1 1973 143 7 0 chr10 66041595 66041889 -74274876 + AluSp SINE Alu 3 298 -15 287 340 48 27 chr10 66042304 66042451 -74274314 + MER5A DNA MER1_type 39 188 -1 235 379 58 0 chr10 66043670 66043773 -74272992 - MIR SINE MIR -58 150 42 340 328 79 44 chr10 66044878 66045220 -74271545 + L1M4 LINE L1 4206 4559 -1587 2036 78 9 47 chr10 66046076 66046396 -74270369 - AluY SINE Alu -3 308 1 23 0 0 0 chr10 66046397 66046420 -74270345 + AT_rich Low_complexity Low_complexity 1 23 0 242 340 28 28 chr10 66047084 66047190 -74269575 - MIR SINE MIR -18 244 139 5672 121 13 2 chr10 66047506 66049093 -74267672 + L1PA13 LINE L1 4530 6162 -1 1467 216 40 11 chr10 66049911 66050290 -74266475 + MLT1B LTR MaLR 1 390 0 33 0 0 0 chr10 66051593 66051626 -74265139 + AT_rich Low_complexity Low_complexity 1 33 0 257 140 0 0 chr10 66053521 66053571 -74263194 + L1MC4 LINE L1 6654 6703 -1339 992 136 0 0 chr10 66053573 66053713 -74263052 - AluSg/x SINE Alu -16 296 157 248 333 117 0 chr10 66054780 66054891 -74261874 - MIR SINE MIR -58 150 27 262 264 154 0 chr10 66055275 66055385 -74261380 + L2 LINE L2 3111 3237 -76 233 314 81 0 chr10 66056343 66056429 -74260336 - L2 LINE L2 -46 3226 3134 303 183 0 17 chr10 66056753 66056813 -74259952 - MER94 DNA DNA -1 133 75 24 0 0 0 chr10 66057688 66057712 -74259053 + AT_rich Low_complexity Low_complexity 1 24 0 264 129 94 0 chr10 66057725 66057810 -74258955 + (TA)n Simple_repeat Simple_repeat 1 93 0 759 153 51 57 chr10 66057861 66058018 -74258747 + MLT1A1 LTR MaLR 1 156 -209 2235 195 54 8 chr10 66058026 66058560 -74258205 - L1P LINE L1 -2657 3489 2931 1303 89 26 0 chr10 66058560 66058750 -74258015 + L1PA13 LINE L1 5968 6162 -1 1012 208 37 28 chr10 66058750 66058966 -74257799 + MLT1A1 LTR MaLR 148 365 0 27 49 0 0 chr10 66059478 66059519 -74257246 + AT_rich Low_complexity Low_complexity 1 41 0 9080 48 8 1 chr10 66060502 66062414 -74254351 - L1PA5 LINE L1 -8 6146 4227 2275 216 15 37 chr10 66062513 66063031 -74253734 + MER67D LTR ERV1 8 514 0 21 71 0 0 chr10 66063158 66063200 -74253565 + AT_rich Low_complexity Low_complexity 1 42 0 202 286 0 0 chr10 66063219 66063275 -74253490 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 1233 204 23 106 chr10 66064198 66064596 -74252169 - MLT1A1 LTR MaLR 0 365 1 202 313 187 33 chr10 66065603 66065753 -74251012 + MIR SINE MIR 31 203 -59 12124 35 0 0 chr10 66066018 66068245 -74248520 + L1PA3 LINE L1 3929 6155 0 1326 225 74 6 chr10 66068903 66069241 -74247524 - MLT1A1 LTR MaLR -4 361 1 21951 73 6 7 chr10 66069499 66072344 -74244421 - HERVL LTR ERVL -361 5293 2452 23 68 0 0 chr10 66072738 66072782 -74243983 + AT_rich Low_complexity Low_complexity 1 44 0 22676 51 1 1 chr10 66074131 66077802 -74238963 - L1PA4 LINE L1 0 6155 2483 3208 36 0 0 chr10 66077863 66078253 -74238512 - L1PA4 LINE L1 0 6155 5766 206 325 60 0 chr10 66078333 66078416 -74238349 + L2 LINE L2 3183 3270 -2 337 359 28 0 chr10 66078992 66079134 -74237631 - L2 LINE L2 -2494 820 675 212 246 33 0 chr10 66079218 66079279 -74237486 + (TA)n Simple_repeat Simple_repeat 2 64 0 21 0 0 0 chr10 66079395 66079416 -74237349 + AT_rich Low_complexity Low_complexity 1 21 0 311 242 27 32 chr10 66079808 66079976 -74236789 - L1MC4 LINE L1 -10 8032 7598 251 404 105 22 chr10 66080579 66081114 -74235651 - L2 LINE L2 -1217 2097 1519 1675 187 3 19 chr10 66081328 66081643 -74235122 + AluJo SINE Alu 1 310 -2 902 234 8 43 chr10 66083419 66083654 -74233111 - MLT2B2 LTR ERVL -11 504 278 300 298 53 30 chr10 66084023 66084154 -74232611 - MIR SINE MIR -8 254 121 24 67 0 0 chr10 66084326 66084371 -74232394 + AT_rich Low_complexity Low_complexity 1 45 0 333 143 39 26 chr10 66084525 66084602 -74232163 - MER116 DNA Mariner -2 78 1 274 186 57 43 chr10 66084742 66084812 -74231953 - MLT1G1 LTR MaLR -31 524 454 348 241 60 0 chr10 66085756 66085889 -74230876 - L1ME1 LINE L1 -9 6157 6017 997 212 5 5 chr10 66085891 66086084 -74230681 + AluJo SINE Alu 3 195 -117 2080 113 0 3 chr10 66086110 66086423 -74230342 + AluSx SINE Alu 1 312 0 1371 61 0 22 chr10 66086783 66086964 -74229801 - MER107 DNA MER1_type -18 179 3 217 315 120 60 chr10 66087122 66087306 -74229459 - L2 LINE L2 -926 2388 2194 297 0 0 0 chr10 66089152 66089185 -74227580 + (TG)n Simple_repeat Simple_repeat 1 33 0 1228 115 44 0 chr10 66089863 66090045 -74226720 - MER4E LTR ERV1 0 766 577 1167 130 0 0 chr10 66090051 66090220 -74226545 + AluSq SINE Alu 144 312 -1 8516 114 3 35 chr10 66090229 66091554 -74225211 + HSMAR1 DNA Mariner 1 1283 -4 1781 174 78 37 chr10 66091557 66091965 -74224800 - MER4B LTR ERV1 -185 425 1 2205 126 0 0 chr10 66092313 66092615 -74224150 + AluSx SINE Alu 1 302 -10 409 273 85 43 chr10 66092807 66093108 -74223657 - MLT1G1 LTR MaLR -270 320 8 845 150 8 0 chr10 66093109 66093242 -74223523 + MLT1G LTR MaLR 457 590 0 319 140 0 0 chr10 66093713 66093763 -74223002 - Alu SINE Alu -3 297 248 25 0 0 0 chr10 66093981 66094006 -74222759 + AT_rich Low_complexity Low_complexity 1 25 0 284 289 31 10 chr10 66094260 66094357 -74222408 - HERVL LTR ERVL -3203 2451 2353 633 297 187 0 chr10 66094467 66094713 -74222052 + L2 LINE L2 2924 3215 -98 963 211 11 0 chr10 66094768 66094948 -74221817 + MER5A DNA MER1_type 3 184 -5 337 387 16 29 chr10 66094994 66095237 -74221528 - HERVL LTR ERVL -3460 2194 1955 418 284 8 8 chr10 66096214 66096341 -74220424 - MIR SINE MIR -46 216 90 457 338 76 0 chr10 66097312 66097510 -74219255 + MIR SINE MIR 47 259 -3 647 191 43 0 chr10 66097681 66097822 -74218943 - MER41A LTR ERV1 -16 538 392 44 20 0 0 chr10 66098628 66098679 -74218086 + AT_rich Low_complexity Low_complexity 1 51 0 216 320 53 0 chr10 66099373 66099448 -74217317 - L2 LINE L2 0 3313 3235 29 28 0 0 chr10 66101019 66101055 -74215710 + AT_rich Low_complexity Low_complexity 1 36 0 22 113 0 0 chr10 66101229 66101335 -74215430 + AT_rich Low_complexity Low_complexity 1 106 0 252 203 54 27 chr10 66101427 66101501 -74215264 + L1MEd LINE L1 2 77 -6042 32 81 0 0 chr10 66101505 66101579 -74215186 + AT_rich Low_complexity Low_complexity 1 74 0 227 271 14 0 chr10 66101691 66101761 -74215004 - L1M4 LINE L1 -1807 4339 4269 543 239 9 0 chr10 66101769 66101878 -74214887 + MSTB1 LTR MaLR 1 110 -322 897 78 157 0 chr10 66101979 66102145 -74214620 - L1P5 LINE L1 -659 5495 5304 * 4878 230 50 11 chr10 66102140 66103545 -74213220 - L1M4 LINE L1 -2399 3747 2288 602 229 11 17 chr10 66103556 66103731 -74213034 - L1M4 LINE L1 -3241 2905 2732 276 351 5 43 chr10 66103780 66103965 -74212800 - L1MCc LINE L1 -5957 466 289 273 309 7 14 chr10 66103994 66104133 -74212632 - L1MCc LINE L1 -6270 153 16 615 140 34 28 chr10 66104263 66104442 -74212323 + GA-rich Low_complexity Low_complexity 1 180 0 23 54 0 0 chr10 66105025 66105062 -74211703 + AT_rich Low_complexity Low_complexity 1 37 0 27 92 0 0 chr10 66106128 66106204 -74210561 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr10 66107082 66107111 -74209654 + AT_rich Low_complexity Low_complexity 1 29 0 1419 120 0 5 chr10 66107225 66107425 -74209340 - AluSx SINE Alu -113 199 1 731 248 100 31 chr10 66109617 66109676 -74207089 - MER33 DNA MER1_type -2267 318 265 1667 55 0 0 chr10 66109676 66109877 -74206888 - AluY SINE Alu -7 304 104 731 248 100 31 chr10 66109877 66110107 -74206658 - MER33 DNA MER1_type -2320 265 9 2099 91 0 44 chr10 66110245 66110563 -74206202 + AluSc SINE Alu 1 304 -5 863 58 0 0 chr10 66110836 66110940 -74205825 - AluYa5 SINE Alu -104 207 104 611 262 112 0 chr10 66110956 66111170 -74205595 - MER33 DNA MER1_type -78 246 9 2183 79 0 44 chr10 66111308 66111626 -74205139 + AluSc SINE Alu 1 304 -5 25 31 0 0 chr10 66112636 66112668 -74204097 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr10 66113103 66113144 -74203621 + AT_rich Low_complexity Low_complexity 1 41 0 267 355 23 12 chr10 66113438 66113610 -74203155 + L1ME LINE L1 5525 5698 -423 227 346 135 29 chr10 66113792 66114171 -74202594 - L2 LINE L2 -352 2962 2544 463 260 154 12 chr10 66114294 66114463 -74202302 - L1MD3 LINE L1 -464 7531 7339 316 286 134 82 chr10 66114923 66115154 -74201611 + L2 LINE L2 3029 3271 -1 11801 174 25 12 chr10 66115949 66117948 -74198817 + L1MA3 LINE L1 21 2046 -5519 9729 171 35 14 chr10 66118059 66119517 -74197248 + L1MA3 LINE L1 4421 5846 -1878 315 0 0 0 chr10 66119517 66119552 -74197213 + (CA)n Simple_repeat Simple_repeat 2 36 0 9729 171 35 14 chr10 66119552 66121164 -74195601 + L1MA3 LINE L1 5846 7568 -156 2002 144 13 0 chr10 66121164 66121462 -74195303 + AluSx SINE Alu 1 302 -10 9729 171 35 14 chr10 66121462 66121623 -74195142 + L1MA3 LINE L1 7568 7724 0 21 0 0 0 chr10 66121790 66121811 -74194954 + AT_rich Low_complexity Low_complexity 1 21 0 328 302 95 20 chr10 66123581 66123833 -74192932 + L1ME LINE L1 5533 5803 -318 1373 168 51 19 chr10 66124048 66124304 -74192461 - Tigger3(Golem) DNA MER2_type -1 3028 2765 736 234 7 0 chr10 66124300 66124441 -74192324 - Tigger3(Golem) DNA MER2_type -2887 142 1 * 262 71 143 0 chr10 66124594 66124636 -74192129 + MLT2A2 LTR ERVL 1 48 -405 20500 79 17 1 chr10 66124658 66127353 -74189412 + HERVL LTR ERVL 2 2740 -2914 1769 94 12 0 chr10 66127350 66127604 -74189161 + HERVL LTR ERVL 1006 1262 -4392 * 1031 110 32 0 chr10 66127713 66127868 -74188897 + MLT2A2 LTR ERVL 294 453 0 360 165 33 0 chr10 66128296 66128387 -74188378 + (TA)n Simple_repeat Simple_repeat 1 94 0 779 150 0 8 chr10 66129865 66129992 -74186773 + MER101 LTR ERV1 11 136 -338 29686 88 5 5 chr10 66230064 66234183 -74082582 - L1P LINE L1 -2024 4122 3 1614 174 36 4 chr10 66234193 66234469 -74082296 - AluJb SINE Alu -26 286 2 2129 77 42 3 chr10 66234909 66235194 -74081571 + AluY SINE Alu 1 296 -15 2224 171 11 0 chr10 66235194 66235569 -74081196 - L1PA16 LINE L1 -26 6140 5762 764 296 33 88 chr10 66236230 66236720 -74080045 + MLT1J LTR MaLR 1 463 -48 330 326 63 48 chr10 66236828 66237098 -74079667 + L2 LINE L2 2226 2499 -815 650 75 11 0 chr10 66237213 66237307 -74079458 - L1PA7 LINE L1 -3 6151 6057 306 274 32 24 chr10 66237487 66237611 -74079154 + CT-rich Low_complexity Low_complexity 5 129 0 9657 57 1 1 chr10 66238476 66240475 -74076290 - L1PA5 LINE L1 -2 6152 4154 1088 252 78 51 chr10 66240575 66240948 -74075817 - L1M2c LINE L1 -6395 394 12 1836 160 7 10 chr10 66241366 66241660 -74075105 + AluSx SINE Alu 1 293 -19 2075 148 22 3 chr10 66243038 66243409 -74073356 + L1MA8 LINE L1 5911 6288 -3 1729 187 150 47 chr10 66244260 66244726 -74072039 + MER67D LTR ERV1 1 514 0 33 25 0 0 chr10 66245196 66245236 -74071529 + AT_rich Low_complexity Low_complexity 1 40 0 325 333 8 0 chr10 66247602 66247725 -74069040 - L3b LINE CR1 -314 1269 1146 23 33 0 0 chr10 66247836 66247866 -74068899 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr10 66247891 66247925 -74068840 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 66248961 66248982 -74067783 + AT_rich Low_complexity Low_complexity 1 21 0 55 29 0 0 chr10 66249347 66249416 -74067349 + AT_rich Low_complexity Low_complexity 1 69 0 1881 295 192 11 chr10 66249549 66250488 -74066277 + L2 LINE L2 1894 3009 -304 257 304 0 14 chr10 66250612 66250681 -74066084 + L2 LINE L2 3203 3270 -2 238 162 27 0 chr10 66252136 66252210 -74064555 + (TA)n Simple_repeat Simple_repeat 2 77 0 348 318 133 17 chr10 66252230 66252403 -74064362 - MLT1I LTR MaLR -95 314 122 382 230 50 14 chr10 66253145 66253284 -74063481 - LTR67 LTR ERVL 0 557 414 255 322 169 0 chr10 66253548 66253666 -74063099 + MIR SINE MIR 20 157 -105 207 232 0 73 chr10 66254588 66254670 -74062095 - MIR SINE MIR -42 220 145 182 37 37 0 chr10 66255574 66255601 -74061164 + (CA)n Simple_repeat Simple_repeat 1 28 0 3650 168 41 44 chr10 66255638 66256426 -74060339 + LTR1 LTR ERV1 1 785 0 211 353 122 7 chr10 66256436 66256575 -74060190 + MIR SINE MIR 93 247 -15 1090 179 119 70 chr10 66256618 66257047 -74059718 - LTR7 LTR ERV1 0 450 1 629 285 40 44 chr10 66257418 66257667 -74059098 - MIR SINE MIR -14 248 1 340 272 89 38 chr10 66257696 66257854 -74058911 + MIR SINE MIR 46 211 -51 249 98 0 0 chr10 66258135 66258176 -74058589 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 845 128 0 15 chr10 66258314 66258447 -74058318 - AluSc SINE Alu -178 131 1 2082 110 7 0 chr10 66258447 66258739 -74058026 - AluSx SINE Alu -18 294 1 254 259 120 19 chr10 66258740 66258848 -74057917 - MIR SINE MIR -46 216 98 441 371 63 22 chr10 66259725 66260170 -74056595 + L2 LINE L2 2851 3313 0 223 286 0 0 chr10 66260369 66260425 -74056340 - MIR SINE MIR -58 204 149 180 326 78 57 chr10 66260467 66260608 -74056157 - MIR SINE MIR -117 145 2 2321 206 24 51 chr10 66261160 66261669 -74055096 + LTR42 LTR ERVL 1 495 0 417 342 63 8 chr10 66261746 66261983 -74054782 + MIR SINE MIR 2 251 -11 246 307 10 50 chr10 66263053 66263154 -74053611 - L2 LINE L2 -1 3271 3175 21 36 0 0 chr10 66266071 66266099 -74050666 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 66267305 66267329 -74049436 + AT_rich Low_complexity Low_complexity 1 24 0 416 242 129 0 chr10 66267333 66267465 -74049300 + MIR SINE MIR 83 231 -31 * 460 259 0 9 chr10 66267462 66267570 -74049195 + L2 LINE L2 3206 3312 -1 30 45 0 0 chr10 66268611 66268655 -74048110 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr10 66270443 66270473 -74046292 + AT_rich Low_complexity Low_complexity 1 30 0 208 226 0 48 chr10 66271550 66271612 -74045153 + GA-rich Low_complexity Low_complexity 1 59 0 845 200 12 0 chr10 66273105 66273275 -74043490 + AluSg/x SINE Alu 140 311 -1 719 257 0 0 chr10 66274393 66274541 -74042224 - MIR SINE MIR -81 181 34 1850 108 63 76 chr10 66275184 66275564 -74041201 - THE1C LTR MaLR 0 375 1 2364 95 22 38 chr10 66277127 66277497 -74039268 - THE1B LTR MaLR 0 364 1 1946 159 0 0 chr10 66277861 66278156 -74038609 - AluSx SINE Alu -17 295 1 332 192 52 29 chr10 66278344 66278516 -74038249 + (TA)n Simple_repeat Simple_repeat 1 176 0 858 296 33 61 chr10 66278595 66278904 -74037861 - L1ME LINE L1 -352 5818 5525 2158 93 4 0 chr10 66278904 66279182 -74037583 - AluSp SINE Alu -21 292 14 858 296 33 61 chr10 66279182 66279328 -74037437 - L1ME LINE L1 -645 5525 5376 373 281 97 42 chr10 66279349 66279587 -74037178 - L1ME LINE L1 -1853 4293 4043 416 284 61 26 chr10 66279631 66279856 -74036909 - L1ME LINE L1 -3284 2862 2630 * 1710 252 38 33 chr10 66279848 66280479 -74036286 - L1ME1 LINE L1 -139 6027 5394 623 255 119 4 chr10 66280503 66280781 -74035984 - L1ME1 LINE L1 -1072 5074 4765 3221 51 2 2 chr10 66281294 66281707 -74035058 - L1PA4 LINE L1 0 6155 5743 304 345 53 12 chr10 66281753 66281924 -74034841 + MIR SINE MIR 21 198 -64 2169 117 3 0 chr10 66281978 66282285 -74034480 - AluSg SINE Alu -2 308 1 453 279 139 0 chr10 66282638 66282803 -74033962 - LTR33A LTR ERVL -20 503 316 320 286 293 0 chr10 66284504 66284644 -74032121 + MIR SINE MIR 3 183 -79 554 261 38 62 chr10 66284843 66285054 -74031711 - MIR SINE MIR -54 208 3 21 0 0 0 chr10 66285203 66285224 -74031541 + AT_rich Low_complexity Low_complexity 1 21 0 429 327 118 17 chr10 66286260 66286557 -74030208 + MLT1L LTR MaLR 175 501 -114 304 299 80 29 chr10 66288914 66289051 -74027714 + L2 LINE L2 2193 2336 -978 788 279 0 80 chr10 66289074 66289325 -74027440 + MIR SINE MIR 2 232 -30 208 218 20 163 chr10 66289334 66289481 -74027284 + MIR SINE MIR 137 262 0 195 391 139 7 chr10 66289594 66289745 -74027020 + L2 LINE L2 2581 2751 -563 2474 57 0 10 chr10 66291312 66291626 -74025139 - AluY SINE Alu 0 311 1 306 330 41 0 chr10 66291700 66291797 -74024968 + MIR3 SINE MIR 99 199 -9 21 0 0 0 chr10 66292173 66292194 -74024571 + AT_rich Low_complexity Low_complexity 1 21 0 689 249 158 10 chr10 66293530 66293739 -74023026 - MIR SINE MIR -21 241 2 189 207 17 52 chr10 66293763 66293821 -74022944 - MIR3 SINE MIR -151 57 2 1777 105 0 8 chr10 66294709 66294972 -74021793 + AluSc SINE Alu 42 302 0 565 366 31 12 chr10 66295190 66295447 -74021318 + MIR SINE MIR 1 262 0 2011 86 0 11 chr10 66295477 66295756 -74021009 - AluY SINE Alu -1 310 35 345 324 77 8 chr10 66296149 66296335 -74020430 + MIR SINE MIR 36 232 -30 535 27 27 0 chr10 66297275 66297348 -74019417 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 189 0 0 0 chr10 66297558 66297579 -74019186 + (TG)n Simple_repeat Simple_repeat 2 22 0 461 270 72 7 chr10 66298122 66298274 -74018491 + MIR SINE MIR 101 262 0 699 304 27 18 chr10 66298437 66298661 -74018104 + MIR SINE MIR 18 243 -19 207 69 0 0 chr10 66298822 66298851 -74017914 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr10 66298934 66298971 -74017794 + AT_rich Low_complexity Low_complexity 1 37 0 277 290 0 0 chr10 66299854 66299923 -74016842 - MIR SINE MIR 0 262 194 460 312 26 7 chr10 66300036 66300190 -74016575 + MLT1I LTR MaLR 253 409 0 2512 60 0 13 chr10 66300410 66300725 -74016040 + AluY SINE Alu 1 311 0 335 342 96 15 chr10 66301636 66301835 -74014930 + MIR SINE MIR 28 242 -20 826 256 89 54 chr10 66301896 66302321 -74014444 - LTR16A1 LTR ERVL -2 455 16 612 255 0 7 chr10 66302290 66302435 -74014330 + MER20 DNA MER1_type 76 219 0 * 192 40 0 0 chr10 66302565 66302590 -74014175 + (CA)n Simple_repeat Simple_repeat 2 26 0 184 298 106 0 chr10 66303687 66303781 -74012984 - MIR3 SINE MIR 0 208 105 2293 72 0 3 chr10 66304156 66304448 -74012317 + AluY SINE Alu 1 291 -20 1951 47 16 0 chr10 66304548 66304803 -74011962 - L1PA7 LINE L1 -201 5953 5695 212 270 0 10 chr10 66306640 66306740 -74010025 + (TA)n Simple_repeat Simple_repeat 1 99 0 191 250 62 0 chr10 66307026 66307074 -74009691 + MIR SINE MIR 57 107 -155 2060 130 33 0 chr10 66307305 66307605 -74009160 - AluSx SINE Alu -2 310 1 2141 108 0 0 chr10 66308878 66309166 -74007599 - AluY SINE Alu -23 288 1 24 0 0 0 chr10 66309689 66309713 -74007052 + AT_rich Low_complexity Low_complexity 1 24 0 564 246 88 9 chr10 66309724 66309939 -74006826 + L1ME4a LINE L1 5628 5859 -262 1619 180 54 7 chr10 66310019 66310313 -74006452 + AluJb SINE Alu 2 309 -3 11837 205 51 33 chr10 66310336 66312878 -74003887 + L1PA16 LINE L1 816 3311 -3558 393 144 33 89 chr10 66312878 66312968 -74003797 + MSTA LTR MaLR 342 426 -2 11837 205 51 33 chr10 66312968 66315453 -74001312 + L1PA16 LINE L1 3311 6078 -791 1797 206 79 2 chr10 66315453 66315846 -74000919 - MSTB LTR MaLR -3 423 1 11837 205 51 33 chr10 66315846 66316644 -74000121 + L1PA16 LINE L1 6078 6860 -9 23 97 0 0 chr10 66316759 66316831 -73999934 + AT_rich Low_complexity Low_complexity 1 72 0 347 308 0 0 chr10 66317265 66317356 -73999409 + GA-rich Low_complexity Low_complexity 3 93 0 278 287 85 16 chr10 66317358 66317487 -73999278 - MIR SINE MIR 0 262 125 414 285 62 0 chr10 66317546 66317690 -73999075 - MIR SINE MIR -14 248 96 511 302 72 45 chr10 66317830 66318052 -73998713 - MIR SINE MIR -1 261 34 724 201 7 20 chr10 66318674 66318859 -73997906 - L1M LINE L1 -805 5341 5181 23 33 0 0 chr10 66318891 66318921 -73997844 + AT_rich Low_complexity Low_complexity 1 30 0 2036 109 11 3 chr10 66319413 66319734 -73997031 + AluSx SINE Alu 1 323 0 21 0 0 0 chr10 66320395 66320416 -73996349 + AT_rich Low_complexity Low_complexity 1 21 0 9264 197 9 18 chr10 66322379 66325082 -73991683 + L1P5 LINE L1 3115 5791 -360 273 196 0 0 chr10 66325098 66325154 -73991611 + (TATG)n Simple_repeat Simple_repeat 2 57 0 307 94 0 0 chr10 66325155 66325208 -73991557 + L1PB1 LINE L1 6098 6150 -1 212 167 33 17 chr10 66326441 66326501 -73990264 + (TA)n Simple_repeat Simple_repeat 2 62 0 26 0 0 0 chr10 66327430 66327456 -73989309 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 66328018 66328046 -73988719 + AT_rich Low_complexity Low_complexity 1 28 0 1075 195 0 5 chr10 66328106 66328311 -73988454 + L1MA5 LINE L1 4039 4242 -1904 886 138 8 0 chr10 66328310 66328469 -73988296 - L1MA3 LINE L1 -130 6175 5999 * 667 113 9 0 chr10 66328609 66328715 -73988050 + L1MA3 LINE L1 6199 6305 0 5409 155 47 17 chr10 66328737 66330754 -73986011 + L1MA5 LINE L1 4233 6300 0 2177 91 0 0 chr10 66331382 66331669 -73985096 - AluSc SINE Alu -22 287 1 23 0 0 0 chr10 66331720 66331743 -73985022 + AT_rich Low_complexity Low_complexity 1 23 0 2168 162 57 20 chr10 66332011 66332500 -73984265 - L1MA4A LINE L1 -8 6997 6491 302 304 12 27 chr10 66332653 66332897 -73983868 + CT-rich Low_complexity Low_complexity 1 240 0 642 192 0 0 chr10 66333352 66333498 -73983267 + G-rich Low_complexity Low_complexity 1 146 0 13341 195 34 50 chr10 66333504 66337140 -73979625 - L1MA4A LINE L1 -525 6480 3007 1922 138 0 0 chr10 66337140 66337415 -73979350 - AluSg SINE Alu -25 285 11 13341 195 34 50 chr10 66337415 66340369 -73976396 - L1MA4A LINE L1 -3998 3007 6 2013 125 10 0 chr10 66341137 66341433 -73975332 + AluSp SINE Alu 3 301 -12 422 141 172 0 chr10 66343379 66343478 -73973287 + L1MA8 LINE L1 6173 6288 -3 27 0 0 0 chr10 66343908 66343935 -73972830 + AT_rich Low_complexity Low_complexity 1 27 0 775 274 70 9 chr10 66344098 66344328 -73972437 - MIR SINE MIR -17 245 2 24 0 0 0 chr10 66344520 66344544 -73972221 + AT_rich Low_complexity Low_complexity 1 24 0 224 360 149 6 chr10 66344896 66345071 -73971694 + MIR SINE MIR 52 251 -11 23 0 0 0 chr10 66345097 66345120 -73971645 + AT_rich Low_complexity Low_complexity 1 23 0 882 298 83 22 chr10 66345895 66346304 -73970461 - MLT1J2 LTR MaLR -2 448 15 240 35 0 0 chr10 66346704 66346733 -73970032 + (TGG)n Simple_repeat Simple_repeat 1 29 0 220 198 25 86 chr10 66347155 66347236 -73969529 - MIR SINE MIR -1 261 186 223 329 0 0 chr10 66347244 66347314 -73969451 + MER91 DNA MER1_type 1 70 -70 1463 241 50 13 chr10 66348262 66348685 -73968080 - MLT1D LTR MaLR 0 505 5 2357 74 0 3 chr10 66349413 66349711 -73967054 - AluY SINE Alu -9 302 6 672 75 0 0 chr10 66350724 66350818 -73965947 - L1PA13 LINE L1 -87 6076 5983 317 286 23 23 chr10 66351916 66352105 -73964660 + CT-rich Low_complexity Low_complexity 1 189 0 265 252 94 8 chr10 66353032 66353159 -73963606 - Charlie7 DNA MER1_type -58 2554 2417 * 660 231 86 66 chr10 66353152 66353260 -73963505 - Charlie7 DNA MER1_type -1891 721 617 2237 102 0 0 chr10 66353260 66353554 -73963211 + AluSg SINE Alu 1 294 -16 660 231 86 66 chr10 66353554 66353748 -73963017 - Charlie7 DNA MER1_type -1995 617 413 360 283 58 7 chr10 66353877 66354015 -73962750 - Charlie7 DNA MER1_type -2424 188 44 183 157 22 45 chr10 66355726 66355815 -73960950 + CT-rich Low_complexity Low_complexity 1 87 0 190 360 59 37 chr10 66356026 66356162 -73960603 - MIR3 SINE MIR -69 139 1 194 284 122 66 chr10 66356525 66356722 -73960043 - L2 LINE L2 0 3313 3106 535 335 71 30 chr10 66357077 66357343 -73959422 - L3 LINE CR1 -6 1571 1295 1738 131 11 4 chr10 66357370 66357637 -73959128 - AluSx SINE Alu -43 269 1 24 0 0 0 chr10 66358540 66358564 -73958201 + AT_rich Low_complexity Low_complexity 1 24 0 672 243 50 20 chr10 66359027 66359229 -73957536 + MER3 DNA MER1_type 2 209 0 2296 74 0 3 chr10 66359261 66359580 -73957185 + AluSc SINE Alu 2 319 0 829 249 32 45 chr10 66359812 66360033 -73956732 + MER58A DNA MER1_type 2 219 -5 366 236 56 11 chr10 66360051 66360140 -73956625 + MER58B DNA MER1_type 244 336 -5 288 0 0 0 chr10 66362617 66362649 -73954116 + (CA)n Simple_repeat Simple_repeat 2 33 0 2282 82 0 20 chr10 66365098 66365402 -73951363 - AluY SINE Alu -13 298 1 180 319 67 59 chr10 66365610 66365729 -73951036 + MER5A DNA MER1_type 22 141 -48 1570 190 3 23 chr10 66366282 66366587 -73950178 - AluJo SINE Alu -13 299 1 411 21 0 0 chr10 66367028 66367076 -73949689 + (CA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 66367645 66367669 -73949096 + AT_rich Low_complexity Low_complexity 1 24 0 207 69 0 0 chr10 66367828 66367857 -73948908 + (GA)n Simple_repeat Simple_repeat 2 30 0 209 318 30 0 chr10 66368133 66368199 -73948566 + MIR3 SINE MIR 110 177 -31 2491 63 0 0 chr10 66368515 66368818 -73947947 - AluY SINE Alu -8 303 1 182 259 217 30 chr10 66369077 66369243 -73947522 + L3 LINE CR1 636 832 -745 303 238 16 0 chr10 66369631 66369694 -73947071 + tRNA-Ile-ATT tRNA tRNA 11 74 -3 211 205 0 0 chr10 66370360 66370399 -73946366 + (CA)n Simple_repeat Simple_repeat 2 40 0 267 339 28 9 chr10 66371561 66371670 -73945095 + MIR SINE MIR 48 158 -104 321 281 129 76 chr10 66372435 66372577 -73944188 + HAL1 LINE L1 769 902 -1605 4951 36 7 3 chr10 66372577 66373185 -73943580 + L1PA4 LINE L1 5544 6153 -2 321 281 129 76 chr10 66373185 66373568 -73943197 + HAL1 LINE L1 902 1322 -1185 824 317 101 31 chr10 66373568 66374238 -73942527 + L2 LINE L2 2594 3313 0 4911 142 22 24 chr10 66374442 66376147 -73940618 + L1PA16 LINE L1 4428 6157 -9 307 263 94 71 chr10 66376411 66376635 -73940130 + HAL1 LINE L1 2269 2497 -10 220 273 0 0 chr10 66377012 66377067 -73939698 - L2 LINE L2 0 3272 3218 343 228 50 8 chr10 66377258 66377390 -73939375 - MIR SINE MIR -60 202 65 2399 67 3 16 chr10 66377550 66377864 -73938901 - AluY SINE Alu 0 311 2 251 300 0 0 chr10 66377929 66377989 -73938776 + (TATG)n Simple_repeat Simple_repeat 3 62 0 586 255 113 24 chr10 66378333 66378545 -73938220 + MIR SINE MIR 32 262 0 232 27 54 0 chr10 66378612 66378649 -73938116 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 23 97 0 0 chr10 66379307 66379379 -73937386 + AT_rich Low_complexity Low_complexity 1 72 0 211 271 118 24 chr10 66380143 66380228 -73936537 + L2 LINE L2 3208 3300 -13 2018 143 0 6 chr10 66380791 66381106 -73935659 - AluSq SINE Alu 0 313 1 2560 58 0 0 chr10 66381293 66381602 -73935163 - AluY SINE Alu -2 309 1 255 252 111 37 chr10 66382328 66382463 -73934302 - MER21B LTR ERV1 -373 490 346 6836 175 8 7 chr10 66383170 66385319 -73931446 + L1PA13 LINE L1 3985 6160 -3 2705 201 55 42 chr10 66385322 66385989 -73930776 + L1MC4a LINE L1 7133 7808 0 188 351 141 39 chr10 66386098 66386565 -73930200 + L2 LINE L2 2461 2975 -339 193 258 203 31 chr10 66386700 66386828 -73929937 + L2 LINE L2 3151 3300 -13 2269 119 0 0 chr10 66387048 66387360 -73929405 + AluSx SINE Alu 1 312 0 183 205 0 0 chr10 66387565 66387604 -73929161 + A-rich Low_complexity Low_complexity 1 39 0 429 36 0 0 chr10 66388387 66388442 -73928323 + (TG)n Simple_repeat Simple_repeat 2 56 0 1849 136 18 0 chr10 66388442 66388721 -73928044 - AluSx SINE Alu -28 284 1 406 296 127 21 chr10 66389226 66389415 -73927350 - MIR SINE MIR 0 262 54 2804 163 23 13 chr10 66390389 66390862 -73925903 + L1PA14 LINE L1 1 478 -7103 11952 181 7 6 chr10 66390862 66392915 -73923850 + L1PA14 LINE L1 4389 6424 -1175 2352 74 0 3 chr10 66392915 66393212 -73923553 + AluY SINE Alu 7 302 -9 11952 181 7 6 chr10 66393212 66394379 -73922386 + L1PA14 LINE L1 6424 7588 -11 234 368 53 44 chr10 66394511 66394832 -73921933 + L2 LINE L2 2141 2464 -850 828 163 6 52 chr10 66394855 66395027 -73921738 - FRAM SINE Alu -13 163 1 264 339 85 52 chr10 66395075 66395289 -73921476 + L2 LINE L2 2895 3127 -145 1429 165 6 79 chr10 66395289 66395605 -73921160 - AluJo SINE Alu -19 293 1 264 339 85 52 chr10 66395605 66395756 -73921009 + L2 LINE L2 3127 3272 0 180 200 0 0 chr10 66395756 66395796 -73920969 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 22 56 0 0 chr10 66397663 66397699 -73919066 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr10 66397796 66397826 -73918939 + AT_rich Low_complexity Low_complexity 1 30 0 1734 73 97 0 chr10 66397841 66398100 -73918665 - L1MA1 LINE L1 0 6302 6019 10176 178 30 13 chr10 66398103 66400114 -73916651 - L1MA5 LINE L1 -4 6296 4214 2337 106 0 0 chr10 66400114 66400416 -73916349 + AluSg SINE Alu 1 302 -8 10176 178 30 13 chr10 66400416 66401280 -73915485 - L1MA5 LINE L1 -2086 4214 3367 1323 248 48 19 chr10 66401281 66401726 -73915039 + MER89 LTR ERV1 2 559 0 657 263 30 48 chr10 66404827 66405097 -73911668 + HAL1 LINE L1 1 265 -2242 601 283 101 47 chr10 66405140 66405458 -73911307 + HAL1 LINE L1 362 696 -1811 371 341 175 5 chr10 66406463 66406680 -73910085 + MIR SINE MIR 9 262 0 24 32 0 0 chr10 66406685 66406716 -73910049 + AT_rich Low_complexity Low_complexity 1 31 0 431 191 7 0 chr10 66407660 66407807 -73908958 + (TA)n Simple_repeat Simple_repeat 2 149 0 28 0 0 0 chr10 66408058 66408086 -73908679 + AT_rich Low_complexity Low_complexity 1 28 0 2114 146 16 24 chr10 66408455 66408833 -73907932 - THE1C LTR MaLR 0 375 1 357 317 72 75 chr10 66409364 66409670 -73907095 - L2 LINE L2 -4 3309 3005 237 33 0 0 chr10 66409701 66409731 -73907034 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2229 115 3 0 chr10 66410330 66410634 -73906131 - AluSp SINE Alu -8 305 1 216 167 0 0 chr10 66410890 66410938 -73905827 + (CAGAGA)n Simple_repeat Simple_repeat 3 50 0 3946 144 19 11 chr10 66411455 66412093 -73904672 + MER39B LTR ERV1 1 643 -10 2308 95 0 0 chr10 66412107 66412402 -73904363 + AluSg SINE Alu 1 295 -15 22 56 0 0 chr10 66414207 66414243 -73902522 + AT_rich Low_complexity Low_complexity 1 36 0 229 305 0 0 chr10 66414562 66414621 -73902144 + MIR SINE MIR 201 259 -3 270 309 25 0 chr10 66415235 66415316 -73901449 + MIR SINE MIR 68 150 -112 594 298 45 11 chr10 66415955 66416133 -73900632 - MIR SINE MIR -72 190 7 1251 174 51 96 chr10 66416532 66416888 -73899877 - MER58B DNA MER1_type -1 340 1 1686 149 0 0 chr10 66417002 66417257 -73899508 - AluSg SINE Alu -2 308 54 307 244 12 0 chr10 66417410 66417492 -73899273 - L1MA8 LINE L1 0 6291 6209 * 2283 145 39 14 chr10 66417490 66417925 -73898840 + L1MA8 LINE L1 5787 6232 -59 1339 270 49 49 chr10 66418421 66418969 -73897796 - L1ME3A LINE L1 -9 6161 5614 289 257 257 6 chr10 66419888 66420059 -73896706 + MIR SINE MIR 40 253 -9 313 353 26 0 chr10 66420269 66420385 -73896380 - MIR3 SINE MIR -52 156 38 25 83 0 0 chr10 66420516 66420576 -73896189 + AT_rich Low_complexity Low_complexity 1 60 0 253 321 82 15 chr10 66421301 66421435 -73895330 - MIR SINE MIR -1 261 119 311 271 9 26 chr10 66421625 66421784 -73894981 + L1MC4 LINE L1 7642 7906 -136 23 33 0 0 chr10 66422426 66422456 -73894309 + AT_rich Low_complexity Low_complexity 1 30 0 791 335 80 60 chr10 66422644 66423346 -73893419 - L3 LINE CR1 -125 1452 737 304 296 44 39 chr10 66425074 66425187 -73891578 + L1MCc LINE L1 23 139 -6284 1900 186 96 45 chr10 66425187 66425676 -73891089 - MER67D LTR ERV1 0 514 1 304 296 44 39 chr10 66425676 66425768 -73890997 + L1MCc LINE L1 139 229 -6194 283 241 38 0 chr10 66425817 66425896 -73890869 + L1MC4a LINE L1 6782 6863 -945 642 214 0 0 chr10 66425899 66426016 -73890749 + FLAM_C SINE Alu 3 119 -24 2856 229 70 30 chr10 66426070 66426402 -73890363 + L1MC4a LINE L1 6890 7207 -601 2123 107 16 3 chr10 66426402 66426711 -73890054 + AluSq SINE Alu 1 313 0 2856 229 70 30 chr10 66426711 66427297 -73889468 + L1MC4a LINE L1 7207 7808 0 2365 107 3 0 chr10 66428419 66428729 -73888036 + AluSp SINE Alu 1 311 -2 440 157 22 0 chr10 66428867 66428956 -73887809 + L1MA3 LINE L1 6215 6305 0 212 172 17 0 chr10 66429376 66429434 -73887331 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 824 187 11 44 chr10 66431339 66431402 -73885363 + MER20 DNA MER1_type 42 106 -113 1510 257 91 41 chr10 66431402 66431985 -73884780 + LTR9 LTR ERV1 1 612 0 824 187 11 44 chr10 66431985 66432103 -73884662 + MER20 DNA MER1_type 106 217 -2 423 0 0 0 chr10 66433051 66433098 -73883667 + (TG)n Simple_repeat Simple_repeat 2 48 0 333 323 44 31 chr10 66433161 66433390 -73883375 - L1ME LINE L1 -501 5620 5389 581 126 0 10 chr10 66433896 66433999 -73882766 + (TTCC)n Simple_repeat Simple_repeat 2 103 0 225 389 77 32 chr10 66434198 66434419 -73882346 - MIR SINE MIR -12 250 20 234 269 0 0 chr10 66434935 66434987 -73881778 + (ATG)n Simple_repeat Simple_repeat 3 54 0 690 224 100 0 chr10 66435020 66435190 -73881575 - MIR SINE MIR -55 207 21 648 294 48 41 chr10 66436020 66436312 -73880453 - L2 LINE L2 0 3313 3020 1295 306 110 19 chr10 66436497 66437117 -73879648 + L2 LINE L2 2293 2968 -346 29 70 0 0 chr10 66437462 66437519 -73879246 + AT_rich Low_complexity Low_complexity 1 57 0 270 361 67 67 chr10 66438468 66438737 -73878028 - L2 LINE L2 -32 3240 2972 212 307 74 74 chr10 66438863 66439107 -73877658 - L2 LINE L2 -493 2821 2578 396 128 0 93 chr10 66439151 66439237 -73877528 + MER67C LTR ERV1 312 389 -321 416 226 196 0 chr10 66439260 66439393 -73877372 + MER67D LTR ERV1 356 514 0 459 309 134 55 chr10 66439393 66439885 -73876880 - L2 LINE L2 -736 2578 2048 2038 148 0 3 chr10 66441078 66441388 -73875377 - AluSx SINE Alu -2 310 2 691 278 50 33 chr10 66441935 66442176 -73874589 - MIR SINE MIR -1 261 17 196 325 162 17 chr10 66442858 66442975 -73873790 + MIR3 SINE MIR 8 141 -67 24 77 0 0 chr10 66444541 66444593 -73872172 + AT_rich Low_complexity Low_complexity 1 52 0 208 147 0 0 chr10 66446781 66446815 -73869950 + (TAA)n Simple_repeat Simple_repeat 1 34 0 738 215 41 36 chr10 66446852 66447047 -73869718 - MIR SINE MIR -1 261 66 264 59 0 0 chr10 66447250 66447284 -73869481 + (TGG)n Simple_repeat Simple_repeat 3 36 0 3309 189 13 3 chr10 66447832 66448463 -73868302 + L1MB7 LINE L1 5532 6168 -16 197 348 54 104 chr10 66448703 66448962 -73867803 + L2 LINE L2 2987 3232 -40 1243 153 0 14 chr10 66449012 66449221 -73867544 - L1PB3 LINE L1 0 6154 5949 2210 72 7 0 chr10 66450518 66450795 -73865970 + AluSp SINE Alu 28 306 -7 480 18 0 0 chr10 66450886 66450943 -73865822 + (TG)n Simple_repeat Simple_repeat 2 58 0 237 287 131 16 chr10 66451031 66451153 -73865612 + MIR SINE MIR 47 182 -80 290 239 42 0 chr10 66451885 66451956 -73864809 + MIR SINE MIR 119 192 -70 25 0 0 0 chr10 66452311 66452336 -73864429 + AT_rich Low_complexity Low_complexity 1 25 0 221 245 0 0 chr10 66452366 66452415 -73864350 + A-rich Low_complexity Low_complexity 3 51 0 25 31 0 0 chr10 66452716 66452748 -73864017 + AT_rich Low_complexity Low_complexity 1 32 0 340 273 106 119 chr10 66452890 66453268 -73863497 + L2 LINE L2 2870 3242 -71 673 250 36 62 chr10 66453881 66454105 -73862660 - MER20 DNA MER1_type -1 218 1 776 48 38 0 chr10 66454338 66454443 -73862322 + L1PA4 LINE L1 6047 6155 0 463 171 34 41 chr10 66454485 66454631 -73862134 - L1MA7 LINE L1 -4 6287 6143 745 117 75 160 chr10 66454631 66454645 -73862120 + L1MA7 LINE L1 5646 5660 -631 2272 106 0 3 chr10 66454645 66454947 -73861818 + AluSx SINE Alu 3 303 -9 745 117 75 160 chr10 66454947 66455145 -73861620 + L1MA7 LINE L1 5660 5840 -451 1765 133 8 0 chr10 66455315 66455571 -73861194 - Tigger3(Golem) DNA MER2_type -1 3028 2771 676 212 0 60 chr10 66455568 66455608 -73861157 - Tigger3(Golem) DNA MER2_type -1089 142 101 * 1927 156 138 5 chr10 66455608 66455986 -73860779 + MSTA LTR MaLR 1 428 0 676 212 0 60 chr10 66455986 66456096 -73860669 - Tigger3(Golem) DNA MER2_type -1130 101 1 213 229 57 57 chr10 66456096 66456166 -73860599 - L2 LINE L2 -36 3277 3208 203 337 86 69 chr10 66456383 66456558 -73860207 + MIR3 SINE MIR 30 207 -1 293 231 56 74 chr10 66456755 66456863 -73859902 + L2 LINE L2 3205 3310 -3 3839 181 21 8 chr10 66457034 66457789 -73858976 - L1MB1 LINE L1 -4 6164 5400 291 370 45 3 chr10 66458049 66458233 -73858532 + MIR3 SINE MIR 15 206 -2 223 355 0 0 chr10 66458515 66458591 -73858174 + (TAG)n Simple_repeat Simple_repeat 3 78 0 301 198 112 40 chr10 66458834 66458989 -73857776 + L1MCa LINE L1 1996 6243 -158 450 196 0 0 chr10 66458993 66459085 -73857680 + (TA)n Simple_repeat Simple_repeat 1 92 0 2259 113 0 3 chr10 66459163 66459472 -73857293 + AluSc SINE Alu 1 308 -1 709 81 16 0 chr10 66460071 66460194 -73856571 + (TAGA)n Simple_repeat Simple_repeat 4 128 0 1682 260 38 27 chr10 66460900 66461202 -73855563 + L1ME1 LINE L1 5596 5908 -258 2087 131 131 13 chr10 66461202 66461585 -73855180 - MSTA LTR MaLR 0 428 1 1682 260 38 27 chr10 66461585 66461839 -73854926 + L1ME1 LINE L1 5908 6158 -8 24 0 0 0 chr10 66463456 66463480 -73853285 + AT_rich Low_complexity Low_complexity 1 24 0 813 128 24 8 chr10 66463481 66463606 -73853159 - FLAM_C SINE Alu -16 127 1 27 62 0 0 chr10 66463615 66463663 -73853102 + AT_rich Low_complexity Low_complexity 1 48 0 233 369 48 19 chr10 66463691 66463794 -73852971 - L2 LINE L2 -7 3306 3201 198 287 0 92 chr10 66464294 66464381 -73852384 - L2 LINE L2 -1 3312 3234 21 0 0 0 chr10 66464736 66464757 -73852008 + AT_rich Low_complexity Low_complexity 1 21 0 474 231 29 0 chr10 66464817 66464921 -73851844 + MIR SINE MIR 155 261 -1 1545 168 49 28 chr10 66466131 66466416 -73850349 + AluJb SINE Alu 1 291 -21 355 234 138 14 chr10 66466423 66466568 -73850197 - Charlie7 DNA MER1_type -1012 1600 1438 1701 247 81 3 chr10 66466576 66467155 -73849610 + L1MC4 LINE L1 874 1497 -4929 2227 138 8 22 chr10 66467202 66467557 -73849208 - THE1B LTR MaLR -12 352 3 11810 87 6 1 chr10 66467559 66469132 -73847633 - THE1B-int LTR MaLR 0 1580 1 2314 132 5 24 chr10 66469132 66469503 -73847262 - THE1B LTR MaLR 0 364 1 1755 201 198 15 chr10 66469510 66470199 -73846566 + L1M1 LINE L1 2820 3607 -3958 7252 212 74 17 chr10 66470199 66471550 -73845215 + L1MC3 LINE L1 5781 7270 -515 2504 52 0 13 chr10 66471550 66471857 -73844908 + AluY SINE Alu 1 303 -8 7252 212 74 17 chr10 66471857 66472378 -73844387 + L1MC3 LINE L1 7270 7760 -25 2113 98 11 0 chr10 66472378 66472653 -73844112 + AluSg SINE Alu 21 298 -12 369 304 42 37 chr10 66472689 66472880 -73843885 + L1MC4 LINE L1 4560 4751 -1675 3070 154 69 25 chr10 66472885 66473520 -73843245 + L1MC1 LINE L1 5671 6333 0 2336 102 3 0 chr10 66473546 66473851 -73842914 + AluSp SINE Alu 1 306 -7 4421 208 13 9 chr10 66473864 66474730 -73842035 + L1PA13 LINE L1 233 1101 -5686 4040 185 15 45 chr10 66474729 66475121 -73841644 + L1M1 LINE L1 4364 4766 -2799 * 2112 99 0 43 chr10 66475121 66475444 -73841321 + AluSc SINE Alu 1 309 0 4040 185 15 45 chr10 66475444 66475991 -73840774 + L1M1 LINE L1 4766 5275 -2290 5910 103 16 3 chr10 66476017 66477612 -73839153 + L1PA13 LINE L1 4551 6147 -16 559 314 90 53 chr10 66477651 66477792 -73838973 + L1MC4 LINE L1 4777 4911 -1515 2044 139 7 0 chr10 66477792 66478102 -73838663 + AluSx SINE Alu 1 312 0 559 314 90 53 chr10 66478102 66478739 -73838026 + L1MC4 LINE L1 4911 5584 -842 534 262 13 27 chr10 66478769 66478951 -73837814 + L1MC4 LINE L1 5702 5879 -522 1299 287 140 20 chr10 66479005 66480313 -73836452 + L1MC4 LINE L1 6072 7649 -673 2277 201 135 58 chr10 66480351 66480463 -73836302 + MER63C DNA MER1_type 1 103 -957 2359 74 0 3 chr10 66480463 66480761 -73836004 - AluY SINE Alu -14 297 1 2277 201 135 58 chr10 66480761 66481389 -73835376 + MER63C DNA MER1_type 103 815 -245 1821 114 57 7 chr10 66481389 66481669 -73835096 - AluSx SINE Alu -18 294 1 2277 201 135 58 chr10 66481669 66481765 -73835000 + MER63C DNA MER1_type 815 902 -28 595 287 58 63 chr10 66481774 66482202 -73834563 + L1MC4 LINE L1 7689 8114 -208 1429 208 3 10 chr10 66482227 66482525 -73834240 + AluJb SINE Alu 3 298 -14 1692 123 10 97 chr10 66483106 66483416 -73833349 + AluSx SINE Alu 1 283 -29 186 43 0 0 chr10 66483416 66483439 -73833326 + (AAATG)n Simple_repeat Simple_repeat 3 25 0 1897 146 3 22 chr10 66485538 66485854 -73830911 + AluSx SINE Alu 3 312 0 2279 239 30 15 chr10 66486478 66487146 -73829619 - L1M4 LINE L1 -904 5176 4499 387 237 126 64 chr10 66489026 66489040 -73827725 - L1MC4a LINE L1 -1626 6182 6170 2129 121 3 3 chr10 66489040 66489346 -73827419 - AluSp SINE Alu -7 306 1 387 237 126 64 chr10 66489346 66489673 -73827092 - L1MC4a LINE L1 -1638 6170 5820 2215 108 0 0 chr10 66490413 66490710 -73826055 - AluSc SINE Alu -12 297 1 1613 199 0 3 chr10 66491126 66491413 -73825352 - AluJb SINE Alu -24 288 3 24 0 0 0 chr10 66491631 66491655 -73825110 + AT_rich Low_complexity Low_complexity 1 24 0 397 219 38 9 chr10 66492068 66492173 -73824592 - L1MC4a LINE L1 -1979 5829 5722 250 45 0 91 chr10 66492333 66492399 -73824366 + (TATG)n Simple_repeat Simple_repeat 2 61 0 21 0 0 0 chr10 66492908 66492929 -73823836 + AT_rich Low_complexity Low_complexity 1 21 0 1100 190 39 143 chr10 66492929 66493335 -73823430 + MLT1A1 LTR MaLR 1 364 -1 392 252 20 0 chr10 66493658 66493805 -73822960 + (TA)n Simple_repeat Simple_repeat 1 150 0 21 36 0 0 chr10 66493916 66493944 -73822821 + AT_rich Low_complexity Low_complexity 1 28 0 271 343 41 4 chr10 66494032 66494277 -73822488 - L1M4 LINE L1 -2200 3880 3627 2292 121 11 14 chr10 66494622 66494987 -73821778 + THE1B LTR MaLR 1 364 0 1311 123 43 8 chr10 66495056 66495291 -73821474 - L1MA4 LINE L1 -1 6299 6057 1766 260 129 49 chr10 66497392 66498407 -73818358 - L1ME LINE L1 -4893 1139 105 285 29 0 0 chr10 66498407 66498441 -73818324 + (CA)n Simple_repeat Simple_repeat 2 35 0 1766 260 129 49 chr10 66498441 66498550 -73818215 - L1ME LINE L1 -5927 105 6 198 0 0 0 chr10 66499278 66499300 -73817465 + (TA)n Simple_repeat Simple_repeat 2 23 0 602 219 11 2 chr10 66499472 66499655 -73817110 - MER58B DNA MER1_type -1 340 1 459 296 58 40 chr10 66500072 66500346 -73816419 + L1MD1 LINE L1 4798 5076 -1070 347 230 130 23 chr10 66500348 66500645 -73816120 + L1MD1 LINE L1 5122 5467 -697 739 199 23 0 chr10 66500658 66500789 -73815976 + L1MDa LINE L1 119 252 -6288 730 236 51 32 chr10 66500811 66501027 -73815738 + L1MD1 LINE L1 6022 6241 -1 469 277 127 9 chr10 66501027 66501240 -73815525 - L2 LINE L2 -18 3295 3058 542 277 47 75 chr10 66501245 66501523 -73815242 - L2 LINE L2 -390 2924 2655 14887 202 55 11 chr10 66501601 66501963 -73814802 - L1PB1 LINE L1 -1 6866 6521 973 58 15 0 chr10 66501963 66502100 -73814665 + (TAGA)n Simple_repeat Simple_repeat 4 142 0 14887 202 55 11 chr10 66502100 66508201 -73808564 - L1PB1 LINE L1 -346 6521 101 567 324 24 0 chr10 66508295 66508502 -73808263 + MIR SINE MIR 47 258 -4 27 0 0 0 chr10 66508765 66508792 -73807973 + AT_rich Low_complexity Low_complexity 1 27 0 258 276 17 0 chr10 66508974 66509032 -73807733 + MLT1K LTR MaLR 174 232 -356 1455 175 7 131 chr10 66509601 66510053 -73806712 + L1PA15 LINE L1 5769 6164 -1 35 0 0 22 chr10 66510309 66510340 -73806425 + AT_rich Low_complexity Low_complexity 1 32 -13 2110 113 0 0 chr10 66510340 66510623 -73806142 - AluSg1 SINE Alu -26 283 1 35 0 0 22 chr10 66510623 66510637 -73806128 + AT_rich Low_complexity Low_complexity 32 45 0 219 249 67 129 chr10 66510640 66510731 -73806034 - MIR SINE MIR -50 212 138 1668 128 0 123 chr10 66510731 66511082 -73805683 + AluSx SINE Alu 1 308 -4 219 249 67 129 chr10 66511082 66511183 -73805582 - MIR SINE MIR -124 138 32 21 36 0 0 chr10 66512119 66512147 -73804618 + AT_rich Low_complexity Low_complexity 1 28 0 784 348 25 19 chr10 66512255 66512623 -73804142 - LTR16B LTR ERVL -92 372 3 26 0 0 0 chr10 66512907 66512933 -73803832 + AT_rich Low_complexity Low_complexity 1 26 0 688 339 102 32 chr10 66512934 66513403 -73803362 + L2 LINE L2 2806 3307 -6 5858 123 14 3 chr10 66513622 66514788 -73801977 - L1PB1 LINE L1 -33 6118 4942 225 0 0 0 chr10 66514798 66514823 -73801942 + (T)n Simple_repeat Simple_repeat 1 25 0 355 355 61 48 chr10 66515012 66515390 -73801375 - L2 LINE L2 -3 3310 2928 2001 136 3 0 chr10 66515408 66515702 -73801063 + AluSx SINE Alu 1 295 -17 1767 105 112 4 chr10 66515849 66516116 -73800649 + AluSx SINE Alu 1 296 -16 204 272 0 11 chr10 66517003 66517095 -73799670 + T-rich Low_complexity Low_complexity 4 94 0 1429 195 15 8 chr10 66517993 66518255 -73798510 + AluJb SINE Alu 35 298 -14 27 0 0 0 chr10 66518325 66518352 -73798413 + AT_rich Low_complexity Low_complexity 1 27 0 446 246 97 15 chr10 66518419 66518553 -73798212 - MIR SINE MIR -102 160 16 720 291 48 4 chr10 66518568 66518795 -73797970 - MIR SINE MIR -25 237 1 187 264 139 42 chr10 66518962 66519034 -73797731 + MIR SINE MIR 166 244 -18 1428 162 4 36 chr10 66519088 66519335 -73797430 - MER8 DNA MER2_type 0 239 1 294 268 41 21 chr10 66519435 66519532 -73797233 - MIR SINE MIR -64 144 46 204 97 0 0 chr10 66519724 66519755 -73797010 + (CA)n Simple_repeat Simple_repeat 2 32 0 207 149 15 60 chr10 66519857 66519924 -73796841 + (AATAG)n Simple_repeat Simple_repeat 3 66 0 1876 144 109 3 chr10 66521105 66521425 -73795340 + MLT1A1 LTR MaLR 12 365 0 270 227 52 103 chr10 66522749 66522846 -73793919 + L1MDa LINE L1 2 93 -6447 194 208 19 0 chr10 66522855 66522908 -73793857 + (TA)n Simple_repeat Simple_repeat 1 54 0 405 86 0 0 chr10 66522956 66523014 -73793751 + (TA)n Simple_repeat Simple_repeat 1 58 0 213 94 0 0 chr10 66523027 66523059 -73793706 + (CA)n Simple_repeat Simple_repeat 2 33 0 4064 212 78 6 chr10 66523064 66524152 -73792613 + L1MD1 LINE L1 5084 6242 0 26 0 0 0 chr10 66526398 66526424 -73790341 + AT_rich Low_complexity Low_complexity 1 26 0 2586 40 0 0 chr10 66526809 66527111 -73789654 - AluY SINE Alu -9 302 1 25 0 0 0 chr10 66527384 66527409 -73789356 + AT_rich Low_complexity Low_complexity 1 25 0 331 205 25 131 chr10 66527729 66527851 -73788914 + MER58A DNA MER1_type 1 109 0 388 315 45 38 chr10 66527951 66528243 -73788522 - L1ME3A LINE L1 -238 5932 5639 399 235 91 62 chr10 66528273 66528593 -73788172 - L1ME3A LINE L1 -662 5500 5160 1939 121 28 3 chr10 66528593 66528875 -73787890 + AluSx SINE Alu 14 302 -10 399 235 91 62 chr10 66528875 66528919 -73787846 - L1ME3A LINE L1 -1002 5160 5119 277 211 64 73 chr10 66529244 66529353 -73787412 - L1MDa LINE L1 -3652 2730 2623 237 243 0 0 chr10 66530494 66530564 -73786201 + (TA)n Simple_repeat Simple_repeat 1 70 0 1616 98 61 8 chr10 66530564 66530828 -73785937 + L1MA6 LINE L1 6023 6300 0 219 36 0 0 chr10 66530833 66530861 -73785904 + (TG)n Simple_repeat Simple_repeat 1 28 0 4782 239 53 45 chr10 66531344 66532824 -73783941 + L1M4 LINE L1 31 1521 -5021 3381 177 82 38 chr10 66532832 66533152 -73783613 - L1MA9 LINE L1 -215 6097 5792 324 0 0 0 chr10 66533152 66533188 -73783577 + (TG)n Simple_repeat Simple_repeat 1 36 0 3381 177 82 38 chr10 66533188 66534166 -73782599 - L1MA9 LINE L1 -520 5792 4738 329 282 52 26 chr10 66534154 66534498 -73782267 - L1MDa LINE L1 -4359 2023 1643 * 1358 251 12 27 chr10 66534496 66534898 -73781867 + L1M4 LINE L1 1504 1899 -4747 268 297 28 66 chr10 66535766 66535948 -73780817 + LTR68 LTR ERV1 283 457 -283 2047 151 67 3 chr10 66536336 66536708 -73780057 + MSTD LTR MaLR 1 396 0 21 0 0 0 chr10 66537090 66537111 -73779654 + AT_rich Low_complexity Low_complexity 1 21 0 332 273 53 38 chr10 66537422 66537554 -73779211 + L2 LINE L2 3159 3292 -21 376 298 131 0 chr10 66537850 66538018 -73778747 - L2 LINE L2 -1228 2086 1897 1812 115 3 21 chr10 66538863 66539149 -73777616 + AluSx SINE Alu 8 288 -24 302 304 104 9 chr10 66541564 66541679 -73775086 - Charlie8 DNA MER1_type -2154 263 138 473 0 18 0 chr10 66541899 66541956 -73774809 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 266 318 34 40 chr10 66542923 66543099 -73773666 + L1 LINE L1 3588 3762 -2384 1543 138 7 54 chr10 66544148 66544327 -73772438 - AluSg SINE Alu 0 314 154 309 26 0 0 chr10 66544327 66544365 -73772400 + (TA)n Simple_repeat Simple_repeat 1 38 0 1543 138 7 54 chr10 66544365 66544513 -73772252 - AluSg SINE Alu -160 154 1 282 160 0 0 chr10 66544645 66544695 -73772070 - MER4-int LTR ERV1 -5437 1161 1112 2100 130 10 0 chr10 66546112 66546420 -73770345 - AluSq SINE Alu -2 311 1 1820 194 14 11 chr10 66546573 66546934 -73769831 + MER57A LTR ERV1 42 403 0 23 33 0 0 chr10 66547961 66547991 -73768774 + AT_rich Low_complexity Low_complexity 1 30 0 240 183 67 0 chr10 66548108 66548168 -73768597 - MER53 DNA DNA -117 72 9 267 329 37 0 chr10 66548687 66548769 -73767996 - MIR3 SINE MIR -9 199 115 262 308 72 62 chr10 66549000 66549208 -73767557 + L2 LINE L2 3103 3312 -1 819 196 98 16 chr10 66549534 66549728 -73767037 - MER6B DNA MER2_type 0 210 1 1048 262 139 34 chr10 66553526 66553965 -73762800 - L2 LINE L2 0 3313 2829 219 69 0 0 chr10 66554254 66554283 -73762482 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 2161 124 3 0 chr10 66556318 66556624 -73760141 - AluSq SINE Alu -6 307 1 1748 144 10 46 chr10 66557062 66557367 -73759398 + AluSx SINE Alu 7 300 -12 25 0 0 0 chr10 66558968 66558993 -73757772 + AT_rich Low_complexity Low_complexity 1 25 0 252 59 0 0 chr10 66559318 66559352 -73757413 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 288 268 103 0 chr10 66559650 66559747 -73757018 - MIR SINE MIR -36 226 120 1334 145 62 155 chr10 66560355 66560853 -73755912 + LTR47A LTR ERVL 1 452 0 350 358 28 0 chr10 66560919 66561028 -73755737 - MIR SINE MIR -133 129 18 2161 188 32 140 chr10 66561030 66561408 -73755357 - L1MD2 LINE L1 -13 6229 5966 2377 78 0 0 chr10 66561408 66561704 -73755061 + AluSg1 SINE Alu 1 296 -13 2161 188 32 140 chr10 66561704 66562053 -73754712 - L1MD2 LINE L1 -276 5966 5581 1970 198 30 10 chr10 66562133 66562540 -73754225 + MER61B LTR ERV1 2 396 -29 1217 239 109 72 chr10 66562551 66562981 -73753784 + MLT1F LTR MaLR 5 450 -92 254 299 26 58 chr10 66563034 66563188 -73753577 + MLT1F-int LTR MaLR 2 150 -1221 595 240 30 151 chr10 66563251 66563622 -73753143 + MLT1F-int LTR MaLR 1022 1347 -24 1432 227 123 53 chr10 66563645 66564151 -73752614 + MLT1F LTR MaLR 1 541 -1 2172 117 3 0 chr10 66564177 66564486 -73752279 + AluSx SINE Alu 1 310 -2 1835 196 149 67 chr10 66564727 66565384 -73751381 - LTR1B LTR ERV1 -115 711 1 21 0 0 0 chr10 66566374 66566395 -73750370 + AT_rich Low_complexity Low_complexity 1 21 0 204 304 0 0 chr10 66566513 66566582 -73750183 + T-rich Low_complexity Low_complexity 3 71 0 779 106 26 13 chr10 66566853 66567004 -73749761 + GA-rich Low_complexity Low_complexity 1 153 0 342 230 32 8 chr10 66567017 66567143 -73749622 + GA-rich Low_complexity Low_complexity 4 132 0 269 225 56 11 chr10 66567790 66567879 -73748886 - MER46C DNA MER2_type -166 172 80 1025 201 214 89 chr10 66568051 66568251 -73748514 + MLT2B2 LTR ERVL 1 175 -340 863 154 0 0 chr10 66568251 66568381 -73748384 + FLAM_C SINE Alu 1 130 -3 1025 201 214 89 chr10 66568381 66568638 -73748127 + MLT2B2 LTR ERVL 175 515 0 12971 219 40 24 chr10 66569234 66569727 -73747038 - L1MA5 LINE L1 0 7362 6878 288 0 0 0 chr10 66569727 66569759 -73747006 + (TA)n Simple_repeat Simple_repeat 2 33 0 12971 219 40 24 chr10 66569759 66571376 -73745389 - L1MA5 LINE L1 -484 6878 5288 689 210 0 16 chr10 66571376 66571500 -73745265 - FLAM_A SINE Alu -11 122 1 12971 219 40 24 chr10 66571500 66575024 -73741741 - L1MA5 LINE L1 -2074 5288 1654 1874 283 63 19 chr10 66574996 66575618 -73741147 - L1MA5 LINE L1 -6402 807 159 * 22 56 0 0 chr10 66576008 66576044 -73740721 + AT_rich Low_complexity Low_complexity 1 36 0 742 264 0 0 chr10 66576468 66576631 -73740134 + MLT1E1 LTR MaLR 492 654 0 271 279 27 0 chr10 66576638 66576749 -73740016 + L1ME LINE L1 4538 4651 -1495 27 49 0 0 chr10 66576751 66576792 -73739973 + AT_rich Low_complexity Low_complexity 1 41 0 872 288 128 26 chr10 66576805 66577213 -73739552 + L1ME3A LINE L1 4535 4900 -1270 2561 44 0 13 chr10 66577213 66577528 -73739237 + AluY SINE Alu 1 311 0 872 288 128 26 chr10 66577528 66578592 -73738173 + L1ME3A LINE L1 4900 6165 -5 180 184 0 0 chr10 66578711 66578760 -73738005 + (CA)n Simple_repeat Simple_repeat 2 50 0 1336 305 85 26 chr10 66579041 66579582 -73737183 + MLT1E LTR MaLR 13 585 -8 45 102 0 0 chr10 66579674 66579831 -73736934 + AT_rich Low_complexity Low_complexity 1 157 0 926 203 48 78 chr10 66581172 66581467 -73735298 + AluJo SINE Alu 2 287 -25 329 335 86 24 chr10 66582964 66583173 -73733592 + L1ME4a LINE L1 5881 6102 -19 329 179 82 22 chr10 66583492 66583626 -73733139 + (TTAA)n Simple_repeat Simple_repeat 2 143 0 802 217 72 10 chr10 66585508 66585715 -73731050 + L1MD2 LINE L1 6127 6346 -13 26 0 0 0 chr10 66586297 66586323 -73730442 + AT_rich Low_complexity Low_complexity 1 26 0 629 135 81 0 chr10 66586332 66586443 -73730322 + MSTC LTR MaLR 1 120 -308 * 1316 145 14 14 chr10 66586424 66586631 -73730134 + MSTC LTR MaLR 222 428 0 1249 244 45 47 chr10 66586670 66587284 -73729481 + L1ME LINE L1 5136 5801 -363 4526 157 68 11 chr10 66587285 66588102 -73728663 + MER4D LTR ERV1 1 864 -39 364 44 0 0 chr10 66588073 66588118 -73728647 + MER4C LTR ERV1 395 439 -26 * 6319 172 134 3 chr10 66588119 66589283 -73727482 + L1M1 LINE L1 859 2175 -5390 5214 226 118 33 chr10 66589283 66590900 -73725865 - MER52A LTR ERV1 0 1755 1 1822 140 24 40 chr10 66590904 66591121 -73725644 + L1M1 LINE L1 2180 2390 -5175 2143 105 10 7 chr10 66591121 66591417 -73725348 + AluSc SINE Alu 5 301 -8 1822 140 24 40 chr10 66591417 66591570 -73725195 + L1M1 LINE L1 2390 2544 -5021 1120 239 0 5 chr10 66591554 66591759 -73725006 + L1MA2 LINE L1 1375 1578 -5987 * 5939 157 28 12 chr10 66591759 66593214 -73723551 + L1MA2 LINE L1 2550 4028 -3537 3178 132 26 26 chr10 66593202 66594098 -73722667 + L1MA2 LINE L1 6121 7026 -698 * 560 68 0 0 chr10 66594098 66594198 -73722567 + AluY SINE Alu 210 309 0 3889 142 12 35 chr10 66594198 66594922 -73721843 + L1MA2 LINE L1 7016 7723 0 936 221 100 9 chr10 66596115 66596346 -73720419 - MIR SINE MIR 0 262 11 220 307 102 73 chr10 66596762 66596899 -73719866 - L2 LINE L2 0 3313 3173 250 197 33 0 chr10 66598023 66598084 -73718681 + (TG)n Simple_repeat Simple_repeat 2 64 0 3568 103 6 0 chr10 66598524 66599017 -73717748 + MER84 LTR ERVI 12 507 0 4905 147 7 7 chr10 66599017 66599772 -73716993 + MER84-int LTR ERV1 1 755 -4199 20128 128 10 16 chr10 66599779 66600788 -73715977 + MER84-int LTR ERV1 894 1908 -3046 2278 93 0 3 chr10 66600788 66601079 -73715686 + AluSp SINE Alu 5 294 -19 20128 128 10 16 chr10 66601079 66603168 -73713597 + MER84-int LTR ERV1 1908 3972 -982 4043 98 22 30 chr10 66603166 66603798 -73712967 + MER84-int LTR ERV1 4328 4954 0 * 778 94 0 0 chr10 66603798 66603904 -73712861 + MER84 LTR ERVI 1 106 -401 983 216 16 5 chr10 66603904 66604094 -73712671 + LTR26E LTR ERV1 395 586 -36 3165 176 21 27 chr10 66604318 66604944 -73711821 + LTR29 LTR ERV1 1 622 0 313 278 108 38 chr10 66605260 66605472 -73711293 + MIR SINE MIR 22 248 -14 3138 133 22 32 chr10 66605893 66606428 -73710337 + LTR26B LTR ERV1 1 530 -1 515 320 86 23 chr10 66606446 66606621 -73710144 + MIR3 SINE MIR 21 206 -2 255 313 142 39 chr10 66608124 66608357 -73708408 + L2 LINE L2 1863 2119 -1195 17565 61 2 0 chr10 66608557 66611630 -73705135 + L1PA6 LINE L1 3082 6152 -2 3564 204 37 5 chr10 66612267 66613113 -73703652 + L1P LINE L1 4031 4903 -1243 227 359 30 15 chr10 66613769 66613900 -73702865 - LTR67 LTR ERVL -333 224 92 413 156 31 0 chr10 66614657 66614721 -73702044 + AluJ/FLAM SINE Alu 1 66 -236 33 0 0 0 chr10 66614861 66614894 -73701871 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr10 66615190 66615226 -73701539 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 0 4 chr10 66616067 66616315 -73700450 - AluSx SINE Alu -60 252 6 1741 173 34 27 chr10 66617309 66617719 -73699046 + Charlie1b DNA MER1_type 110 522 -1 289 362 92 22 chr10 66617808 66617993 -73698772 - MIR SINE MIR -53 209 12 258 32 0 0 chr10 66619445 66619476 -73697289 + (TC)n Simple_repeat Simple_repeat 2 32 0 27 0 0 0 chr10 66619921 66619948 -73696817 + AT_rich Low_complexity Low_complexity 1 27 0 450 171 0 0 chr10 66620077 66620147 -73696618 - MER3 DNA MER1_type -138 71 2 346 110 12 0 chr10 66620758 66620814 -73695951 + Alu SINE Alu 1 44 -256 28 0 0 0 chr10 66621447 66621475 -73695290 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr10 66621577 66621610 -73695155 + AT_rich Low_complexity Low_complexity 1 33 0 21 71 0 0 chr10 66621672 66621714 -73695051 + AT_rich Low_complexity Low_complexity 1 42 0 9269 77 2 1 chr10 66622909 66624117 -73692648 + L1P LINE L1 1 1209 -4937 2775 216 71 69 chr10 66624256 66625311 -73691454 + L1M4 LINE L1 3608 4664 -1482 401 234 11 46 chr10 66625414 66625640 -73691125 + GA-rich Low_complexity Low_complexity 1 217 0 246 297 9 18 chr10 66625658 66625769 -73690996 + GA-rich Low_complexity Low_complexity 5 114 0 6437 47 0 15 chr10 66625784 66626632 -73690133 + L1PA4 LINE L1 5321 6155 0 255 31 0 0 chr10 66627018 66627050 -73689715 + (TG)n Simple_repeat Simple_repeat 2 33 0 189 0 0 0 chr10 66627296 66627317 -73689448 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 367 279 82 78 chr10 66630724 66631018 -73685747 + L3b LINE CR1 1174 1468 -115 232 257 29 43 chr10 66631721 66631791 -73684974 + LTR16C LTR ERVL 73 141 -350 180 97 0 0 chr10 66631964 66631995 -73684770 + (C)n Simple_repeat Simple_repeat 1 31 0 530 288 68 50 chr10 66632385 66632666 -73684099 - L1MDa LINE L1 -6221 319 34 323 288 220 8 chr10 66633551 66633683 -73683082 + L2 LINE L2 3108 3267 -5 350 273 167 13 chr10 66634117 66634267 -73682498 + MIR SINE MIR 78 250 -12 948 237 113 23 chr10 66634387 66634784 -73681981 - L1M4 LINE L1 -845 5301 4869 182 329 71 0 chr10 66635710 66635780 -73680985 - L2 LINE L2 -13 3259 3185 530 246 127 8 chr10 66635968 66636102 -73680663 - MER5A DNA MER1_type 0 189 40 3947 185 28 11 chr10 66636259 66637042 -73679723 - L1P LINE L1 -5342 804 9 252 0 0 0 chr10 66637419 66637447 -73679318 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 184 371 38 48 chr10 66637463 66637568 -73679197 - L2 LINE L2 -30 3283 3180 260 159 0 48 chr10 66639039 66639102 -73677663 + CT-rich Low_complexity Low_complexity 1 60 0 2459 186 21 97 chr10 66639892 66640636 -73676129 - L1MB7 LINE L1 -46 6138 5451 8593 78 8 1 chr10 66641241 66642439 -73674326 + L1P LINE L1 2018 3223 -2923 12226 40 12 1 chr10 66642539 66644089 -73672676 - L1P LINE L1 -1771 4375 2808 235 222 0 22 chr10 66644267 66644312 -73672453 - MIR SINE MIR -141 67 24 180 125 0 0 chr10 66644761 66644793 -73671972 + (TTA)n Simple_repeat Simple_repeat 1 32 0 226 284 111 0 chr10 66645081 66645162 -73671603 + MLT1L LTR MaLR 120 209 -406 306 106 0 0 chr10 66646054 66646101 -73670664 + (ATG)n Simple_repeat Simple_repeat 2 48 0 719 263 54 16 chr10 66646129 66646339 -73670426 + MLT1G1 LTR MaLR 10 206 -389 8582 77 3 4 chr10 66646791 66647966 -73668799 + L1P LINE L1 1217 2389 -3757 1052 177 75 175 chr10 66648114 66648345 -73668420 + MLT2B1 LTR ERVL 8 261 -259 2155 116 3 0 chr10 66648345 66648639 -73668126 + AluSq SINE Alu 1 295 -18 1052 177 75 175 chr10 66648639 66648977 -73667788 + MLT2B1 LTR ERVL 260 520 0 476 325 85 5 chr10 66649258 66649458 -73667307 + MIR SINE MIR 47 262 0 1147 197 5 0 chr10 66650027 66650220 -73666545 - AluJo SINE Alu -118 194 1 2196 104 3 10 chr10 66650479 66650786 -73665979 - AluSg SINE Alu -5 305 1 487 196 116 14 chr10 66652073 66652211 -73664554 - MIR SINE MIR 0 262 111 1682 173 22 38 chr10 66653722 66654093 -73662672 + MLT1A1 LTR MaLR 1 365 0 530 318 28 19 chr10 66654322 66654533 -73662232 - MIR SINE MIR -2 260 48 185 0 40 0 chr10 66654647 66654672 -73662093 + (TA)n Simple_repeat Simple_repeat 1 26 0 585 202 9 9 chr10 66654747 66654861 -73661904 + FLAM_C SINE Alu 3 116 -17 180 222 127 63 chr10 66655158 66655221 -73661544 - MIR3 SINE MIR -32 176 110 3209 68 0 5 chr10 66655608 66656032 -73660733 + L1PA7 LINE L1 5729 6150 -4 1495 227 160 23 chr10 66656098 66656246 -73660519 + MLT1F LTR MaLR 1 127 -415 225 0 0 0 chr10 66656246 66656271 -73660494 + (TC)n Simple_repeat Simple_repeat 1 25 0 1495 227 160 23 chr10 66656271 66656597 -73660168 + MLT1F LTR MaLR 127 540 -2 960 278 29 0 chr10 66656951 66657224 -73659541 - L1ME LINE L1 -397 5773 5493 334 175 12 0 chr10 66657892 66657972 -73658793 - L1MA4 LINE L1 -1 6299 6219 917 184 0 20 chr10 66658111 66658263 -73658502 + FRAM SINE Alu 1 146 -30 334 286 13 0 chr10 66658399 66658476 -73658289 - MIR SINE MIR -183 79 2 718 296 86 19 chr10 66658518 66658890 -73657875 + HAL1 LINE L1 1408 1804 -703 380 250 87 67 chr10 66658892 66659100 -73657665 + L1MC4a LINE L1 6441 6613 -1195 336 276 33 79 chr10 66659105 66659257 -73657508 + L1MC4a LINE L1 5917 6061 -1747 263 252 13 13 chr10 66659587 66659738 -73657027 + (TA)n Simple_repeat Simple_repeat 2 152 0 212 169 65 13 chr10 66659770 66659847 -73656918 + (TA)n Simple_repeat Simple_repeat 1 81 0 266 207 16 41 chr10 66659860 66659981 -73656784 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 239 271 43 14 chr10 66660094 66660164 -73656601 + L2 LINE L2 3238 3309 -4 270 0 0 0 chr10 66661618 66661648 -73655117 + (TAA)n Simple_repeat Simple_repeat 3 32 0 432 0 0 0 chr10 66661648 66661696 -73655069 + (TTA)n Simple_repeat Simple_repeat 2 49 0 434 301 92 27 chr10 66661791 66662053 -73654712 - HAL1 LINE L1 -727 1780 1502 449 90 0 0 chr10 66663283 66663350 -73653415 - L1PA2 LINE L1 0 6155 6089 521 335 42 28 chr10 66663935 66664222 -73652543 + L1MEc LINE L1 176 466 -5930 22 0 0 0 chr10 66664739 66664761 -73652004 + AT_rich Low_complexity Low_complexity 1 22 0 3919 145 72 46 chr10 66664942 66664987 -73651778 + LTR1B LTR ERV1 1 43 -783 1951 124 0 27 chr10 66664987 66665286 -73651479 + AluSx SINE Alu 19 309 -3 3919 145 72 46 chr10 66665286 66665672 -73651093 + LTR1B LTR ERV1 43 417 -409 1745 142 0 15 chr10 66665672 66665964 -73650801 + AluSg SINE Alu 20 307 0 3919 145 72 46 chr10 66665964 66666335 -73650430 + LTR1B LTR ERV1 417 826 0 518 296 37 11 chr10 66666537 66666726 -73650039 + L1MEc LINE L1 226 419 -5977 738 174 0 15 chr10 66667029 66667161 -73649604 - FLAM_C SINE Alu -3 130 1 324 340 114 26 chr10 66667173 66667444 -73649321 + L3b LINE CR1 1238 1532 -51 21 0 0 0 chr10 66669055 66669076 -73647689 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 66670058 66670080 -73646685 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr10 66670113 66670141 -73646624 + (GA)n Simple_repeat Simple_repeat 1 28 0 1436 219 11 0 chr10 66670142 66670416 -73646349 - AluJo SINE Alu -35 277 1 21 0 0 0 chr10 66670912 66670933 -73645832 + AT_rich Low_complexity Low_complexity 1 21 0 633 218 117 106 chr10 66671776 66672230 -73644535 + LTR37B LTR ERV1 1 459 -9 706 217 14 29 chr10 66672322 66672529 -73644236 + L1MC2 LINE L1 4999 5202 -944 1783 177 34 22 chr10 66673110 66673466 -73643299 - MER6 DNA MER2_type -504 361 2 2324 103 0 10 chr10 66674083 66674393 -73642372 + AluSg SINE Alu 1 307 -3 4102 186 61 22 chr10 66674393 66675347 -73641418 + L1MC2 LINE L1 5206 6194 -150 280 376 29 24 chr10 66675613 66675823 -73640942 - MIR SINE MIR -5 257 47 207 100 0 0 chr10 66676485 66676515 -73640250 + (A)n Simple_repeat Simple_repeat 1 30 0 249 277 72 0 chr10 66677648 66677731 -73639034 + MLT1J LTR MaLR 92 180 -331 184 355 13 0 chr10 66678367 66678443 -73638322 + MIR SINE MIR 156 232 -30 323 232 59 100 chr10 66679618 66679838 -73636927 + L1ME4a LINE L1 5837 6047 -74 256 362 71 24 chr10 66680215 66680342 -73636423 - L2 LINE L2 -4 3268 3136 22 35 0 0 chr10 66680702 66680731 -73636034 + AT_rich Low_complexity Low_complexity 1 29 0 224 200 0 40 chr10 66682687 66682737 -73634028 + (CATA)n Simple_repeat Simple_repeat 1 48 0 224 205 0 39 chr10 66682800 66682878 -73633887 + A-rich Low_complexity Low_complexity 2 76 0 200 149 21 0 chr10 66683179 66683226 -73633539 + (TA)n Simple_repeat Simple_repeat 2 49 0 416 323 90 20 chr10 66683753 66683912 -73632853 + MIR SINE MIR 42 188 -74 1565 176 40 0 chr10 66683912 66684184 -73632581 + AluSx SINE Alu 3 285 -27 333 0 0 0 chr10 66684184 66684221 -73632544 + (CA)n Simple_repeat Simple_repeat 2 38 0 416 323 90 20 chr10 66684221 66684261 -73632504 + MIR SINE MIR 187 256 -6 2299 110 0 3 chr10 66684310 66684619 -73632146 - AluSx SINE Alu -4 308 1 290 355 57 8 chr10 66684983 66685107 -73631658 + L2 LINE L2 3143 3272 0 3804 160 37 46 chr10 66685218 66685958 -73630807 + LTR39 LTR ERV1 1 735 -48 1708 143 97 26 chr10 66685958 66686308 -73630457 - THE1C LTR MaLR 0 375 1 3804 160 37 46 chr10 66686308 66686350 -73630415 + LTR39 LTR ERV1 735 776 -7 1841 221 82 67 chr10 66686410 66687079 -73629686 + LTR8A LTR ERV1 34 712 -15 188 331 37 37 chr10 66687108 66687244 -73629521 - L2 LINE L2 -17 3296 3161 1220 107 93 28 chr10 66687332 66687548 -73629217 - MER30 DNA MER1_type 0 230 1 407 336 19 43 chr10 66689238 66689449 -73627316 - MIR SINE MIR -55 207 2 24 0 0 0 chr10 66690082 66690106 -73626659 + AT_rich Low_complexity Low_complexity 1 24 0 2160 113 0 0 chr10 66690245 66690537 -73626228 - AluSg SINE Alu -18 292 1 991 251 57 27 chr10 66690602 66690936 -73625829 + MER2 DNA MER2_type 2 345 0 21 36 0 0 chr10 66692148 66692176 -73624589 + AT_rich Low_complexity Low_complexity 1 28 0 319 289 70 9 chr10 66693560 66693674 -73623091 - MIR3 SINE MIR -33 175 55 271 301 75 27 chr10 66693701 66693847 -73622918 + MIR SINE MIR 101 253 -9 21 0 0 0 chr10 66694090 66694111 -73622654 + AT_rich Low_complexity Low_complexity 1 21 0 419 308 45 54 chr10 66694193 66694417 -73622348 - L2 LINE L2 -8 3305 3084 482 346 128 18 chr10 66694704 66695039 -73621726 - L2 LINE L2 -2235 1079 708 2281 100 3 0 chr10 66695115 66695416 -73621349 - AluY SINE Alu -9 302 1 21 0 0 0 chr10 66695418 66695439 -73621326 + AT_rich Low_complexity Low_complexity 1 21 0 378 294 0 0 chr10 66695880 66695972 -73620793 + MER5A DNA MER1_type 18 109 -80 11104 218 45 44 chr10 66696868 66699871 -73616894 + L1M2 LINE L1 3 3049 -3895 2360 125 13 19 chr10 66750005 66750382 -73566383 - THE1C LTR MaLR 0 375 1 198 0 0 0 chr10 66750520 66750542 -73566223 + (A)n Simple_repeat Simple_repeat 1 22 0 247 280 40 0 chr10 66750807 66750882 -73565883 + MLT1L LTR MaLR 4 81 -534 797 254 16 21 chr10 66750937 66751130 -73565635 - MER63A DNA MER1_type -11 199 8 382 289 124 27 chr10 66751132 66751357 -73565408 + MLT1L LTR MaLR 149 395 -220 2067 117 4 4 chr10 66751402 66751706 -73565059 + AluSg SINE Alu 1 304 0 4164 88 0 2 chr10 66751718 66752273 -73564492 + MER41A LTR ERV1 1 554 0 578 255 20 7 chr10 66752314 66752463 -73564302 + MER97b DNA MER1_type? 29 179 -874 1797 118 164 78 chr10 66752869 66753241 -73563524 + MER4A LTR ERV1 261 664 0 2256 127 0 0 chr10 66753587 66753894 -73562871 - AluSx SINE Alu -2 310 4 794 150 0 27 chr10 66754126 66754273 -73562492 + L1PB4 LINE L1 6013 6155 -1 28 29 0 0 chr10 66754273 66754308 -73562457 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr10 66754399 66754430 -73562335 + AT_rich Low_complexity Low_complexity 1 31 0 40 49 0 0 chr10 66754512 66754573 -73562192 + AT_rich Low_complexity Low_complexity 1 61 0 7258 156 14 10 chr10 66754607 66755684 -73561081 - HSMAR2 DNA Mariner -53 1249 165 2549 132 8 0 chr10 66755684 66756056 -73560709 + THE1C LTR MaLR 1 375 0 7258 156 14 10 chr10 66756056 66756221 -73560544 - HSMAR2 DNA Mariner -1137 165 2 2275 115 3 0 chr10 66758156 66758468 -73558297 + AluSp SINE Alu 1 313 0 327 270 44 88 chr10 66758681 66758885 -73557880 - MIR SINE MIR 0 262 68 4371 199 44 25 chr10 66759051 66759586 -73557179 - L1MB4 LINE L1 -14 6166 5642 1790 169 0 3 chr10 66759586 66759870 -73556895 - AluJb SINE Alu -23 289 7 4371 199 44 25 chr10 66759870 66761305 -73555460 - L1MB4 LINE L1 -538 5642 4167 2235 90 0 10 chr10 66761521 66761833 -73554932 - AluY SINE Alu -2 309 1 248 286 97 17 chr10 66762042 66762217 -73554548 - L1MEc LINE L1 -4652 1935 1747 382 307 92 44 chr10 66762265 66762581 -73554184 - L1MEc LINE L1 -4923 1664 1334 233 208 56 0 chr10 66762628 66762700 -73554065 - L1MEc LINE L1 -5169 1240 1165 184 130 43 0 chr10 66762792 66762838 -73553927 + CT-rich Low_complexity Low_complexity 2 49 0 657 196 22 27 chr10 66763354 66763538 -73553227 - MER53 DNA DNA -1 188 6 4661 181 39 24 chr10 66763806 66765002 -73551763 + L1MA9 LINE L1 5060 6277 -35 22 0 0 0 chr10 66765988 66766010 -73550755 + AT_rich Low_complexity Low_complexity 1 22 0 723 212 6 30 chr10 66767389 66767554 -73549211 + MER20 DNA MER1_type 6 166 -53 267 332 102 76 chr10 66767606 66768028 -73548737 + L2 LINE L2 2880 3312 -1 267 276 214 35 chr10 66768278 66768423 -73548342 + MIR SINE MIR 92 262 0 1418 179 50 92 chr10 66768689 66769070 -73547695 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr10 66769079 66769101 -73547664 + AT_rich Low_complexity Low_complexity 1 22 0 363 319 139 6 chr10 66769361 66769527 -73547238 - MIR SINE MIR -15 247 60 396 244 58 39 chr10 66770284 66770440 -73546325 - MIR SINE MIR -70 192 34 34 42 0 0 chr10 66770764 66770812 -73545953 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr10 66771148 66771169 -73545596 + AT_rich Low_complexity Low_complexity 1 21 0 3688 97 39 35 chr10 66771540 66772138 -73544627 + MER4A LTR ERV1 1 600 0 303 351 79 12 chr10 66772792 66772991 -73543774 - MIR SINE MIR -48 214 3 294 395 64 21 chr10 66773711 66773944 -73542821 + L2 LINE L2 3003 3245 -27 274 331 129 20 chr10 66774093 66774341 -73542424 - L2 LINE L2 -584 2730 2456 26 30 0 0 chr10 66774952 66774985 -73541780 + AT_rich Low_complexity Low_complexity 1 33 0 408 291 10 0 chr10 66775505 66775608 -73541157 + MER69 DNA AcHobo 28 131 -2395 567 128 11 0 chr10 66775617 66775711 -73541054 + MER69 DNA AcHobo 245 339 -887 848 194 49 45 chr10 66775821 66776137 -73540628 + MER69 DNA AcHobo 2161 2515 -11 2056 126 0 14 chr10 66776172 66776466 -73540299 - AluSq SINE Alu -23 290 1 201 39 0 0 chr10 66776474 66776500 -73540265 + (T)n Simple_repeat Simple_repeat 1 26 0 440 298 106 0 chr10 66776683 66776844 -73539921 - MIR SINE MIR -1 261 84 242 407 9 9 chr10 66776846 66776954 -73539811 + MIR SINE MIR 21 128 -80 443 284 84 7 chr10 66778256 66778411 -73538354 + MIR SINE MIR 26 192 -70 398 266 0 65 chr10 66778426 66778565 -73538200 - FLAM_A SINE Alu -3 130 1 2437 77 0 0 chr10 66779214 66779514 -73537251 + AluY SINE Alu 1 300 -11 271 338 210 4 chr10 66779992 66780380 -73536385 + L2 LINE L2 2559 3069 -203 721 191 7 15 chr10 66780821 66780957 -73535808 + AluJo SINE Alu 1 135 -177 219 139 0 42 chr10 66781502 66781574 -73535191 + (TA)n Simple_repeat Simple_repeat 1 69 0 35 54 0 0 chr10 66781688 66781744 -73535021 + AT_rich Low_complexity Low_complexity 1 56 0 26 0 0 0 chr10 66781818 66781844 -73534921 + AT_rich Low_complexity Low_complexity 1 26 0 405 54 0 0 chr10 66783149 66783205 -73533560 + (GA)n Simple_repeat Simple_repeat 1 56 0 2104 117 0 0 chr10 66783225 66783515 -73533250 + AluSx SINE Alu 12 301 -11 90 19 0 0 chr10 66784552 66784656 -73532109 + AT_rich Low_complexity Low_complexity 1 104 0 602 184 18 0 chr10 66784694 66784803 -73531962 + FLAM_C SINE Alu 1 111 -32 3451 132 59 19 chr10 66786143 66786786 -73529979 - LTR34 LTR ERV1 -30 669 1 505 111 0 0 chr10 66786789 66786861 -73529904 + MER5A DNA MER1_type 34 105 -84 292 159 0 29 chr10 66787642 66787711 -73529054 + CT-rich Low_complexity Low_complexity 4 70 0 7406 36 1 0 chr10 66788914 66789909 -73526856 + L1PA5 LINE L1 5151 6146 -8 1875 103 4 19 chr10 66790132 66790403 -73526362 - AluSg1 SINE Alu -39 270 4 265 282 167 0 chr10 66790421 66790655 -73526110 + L1ME4a LINE L1 5793 6065 -56 297 0 0 0 chr10 66790922 66790955 -73525810 + (TA)n Simple_repeat Simple_repeat 2 34 0 1097 307 131 10 chr10 66792183 66792857 -73523908 - L1ME3A LINE L1 -95 6573 5819 290 210 50 0 chr10 66792880 66792980 -73523785 + (TA)n Simple_repeat Simple_repeat 1 105 0 737 292 45 16 chr10 66792981 66793358 -73523407 - L1ME3A LINE L1 -876 5768 5381 1840 138 18 64 chr10 66793456 66793846 -73522919 - THE1C LTR MaLR 0 375 4 1006 252 40 54 chr10 66793919 66794268 -73522497 - MLT1I LTR MaLR 0 409 66 195 129 0 0 chr10 66794340 66794371 -73522394 + (T)n Simple_repeat Simple_repeat 1 31 0 2106 76 0 0 chr10 66794471 66794735 -73522030 - AluY SINE Alu -47 264 1 2209 248 211 49 chr10 66794740 66795011 -73521754 - L1ME3A LINE L1 -1487 5157 4931 2245 97 7 10 chr10 66795011 66795310 -73521455 - AluSp SINE Alu -15 298 1 2209 248 211 49 chr10 66795310 66796073 -73520692 - L1ME3A LINE L1 -1713 4931 4293 2224 77 0 26 chr10 66796073 66796386 -73520379 - AluY SINE Alu -6 305 1 2209 248 211 49 chr10 66796386 66797500 -73519265 - L1ME3A LINE L1 -2351 4293 2660 737 209 68 11 chr10 66797528 66797705 -73519060 + MER58A DNA MER1_type 37 223 -1 1101 270 124 50 chr10 66797707 66798666 -73518099 - L1ME3A LINE L1 -3981 2663 1533 455 262 53 136 chr10 66798758 66798983 -73517782 - L1ME3A LINE L1 -5484 1150 908 2212 106 0 3 chr10 66798983 66799295 -73517470 - AluY SINE Alu 0 311 1 455 262 53 136 chr10 66799295 66799687 -73517078 - L1ME3A LINE L1 -5726 908 584 314 191 128 50 chr10 66799797 66799938 -73516827 - L1M4 LINE L1 -3668 2478 2327 294 322 50 15 chr10 66800203 66800402 -73516363 - L1M4 LINE L1 -3831 2315 2110 304 358 6 16 chr10 66801451 66801609 -73515156 - MIR SINE MIR -39 169 17 855 288 73 38 chr10 66801665 66802088 -73514677 - LTR33 LTR ERVL -47 474 37 306 0 0 0 chr10 66803146 66803180 -73513585 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 2123 94 0 4 chr10 66803180 66803457 -73513308 - AluSc SINE Alu -33 276 1 26 0 0 0 chr10 66803559 66803585 -73513180 + AT_rich Low_complexity Low_complexity 1 26 0 399 343 34 34 chr10 66804250 66804425 -73512340 - MIR SINE MIR -56 206 32 237 213 21 21 chr10 66804835 66804882 -73511883 - MIR SINE MIR -213 49 3 2120 119 3 0 chr10 66804971 66805266 -73511499 + AluSx SINE Alu 1 296 -16 339 315 28 35 chr10 66808092 66808235 -73508530 - MIR SINE MIR -93 169 28 492 262 75 42 chr10 66808351 66808565 -73508200 - MIR SINE MIR -40 222 2 505 250 28 21 chr10 66809033 66809177 -73507588 - MER5A DNA MER1_type -2 187 43 9063 202 16 16 chr10 66809200 66809879 -73506886 - L1PA16 LINE L1 -9 6157 5480 2815 19 0 9 chr10 66809879 66810200 -73506565 - AluYb8 SINE Alu 0 318 1 9063 202 16 16 chr10 66810200 66812452 -73504313 - L1PA16 LINE L1 -686 5480 3228 1487 171 59 18 chr10 66812842 66813182 -73503583 - L1MDa LINE L1 -4543 1997 1644 1842 178 47 96 chr10 66813186 66813482 -73503283 - L1MDa LINE L1 -5033 1507 1255 908 131 34 11 chr10 66813482 66813658 -73503107 - L1MA4 LINE L1 -1 6299 6120 1842 178 47 96 chr10 66813658 66813974 -73502791 - L1MDa LINE L1 -5285 1255 925 12255 231 31 28 chr10 66813976 66816497 -73500268 - L1PB3 LINE L1 -17 6853 4343 237 33 0 0 chr10 66816497 66816527 -73500238 + (TTG)n Simple_repeat Simple_repeat 2 31 0 12255 231 31 28 chr10 66816527 66821649 -73495116 - L1PB3 LINE L1 -2527 4343 9 316 140 0 0 chr10 66821760 66821817 -73494948 - L1PBa LINE L1 -4417 2446 2390 283 351 53 60 chr10 66822130 66822395 -73494370 - MLT1K LTR MaLR -3 585 323 502 230 62 67 chr10 66823365 66823543 -73493222 - MIR3 SINE MIR -13 195 19 204 345 0 0 chr10 66824405 66824463 -73492302 - L2 LINE L2 -3 3269 3212 857 329 134 32 chr10 66824701 66825382 -73491383 - L3 LINE CR1 -143 1434 685 262 252 63 36 chr10 66825412 66825523 -73491242 + MIR SINE MIR 149 262 0 274 323 87 8 chr10 66825569 66825696 -73491069 - L3 LINE CR1 -982 595 459 346 327 9 9 chr10 66826293 66826403 -73490362 + MER5A DNA MER1_type 4 113 -76 297 284 105 43 chr10 66826427 66826589 -73490176 + MER63A DNA MER1_type 39 210 0 810 219 47 0 chr10 66826599 66826768 -73489997 - MER5A DNA MER1_type -11 178 2 1080 291 180 31 chr10 66826879 66827868 -73488897 + L2 LINE L2 1917 3048 -265 774 289 40 20 chr10 66827932 66828185 -73488580 + MIR SINE MIR 5 262 0 3896 237 65 102 chr10 66828204 66828527 -73488238 + L1 LINE L1 1 335 -5876 2061 98 25 0 chr10 66828527 66828832 -73487933 - AluSx SINE Alu 0 312 1 1185 210 59 39 chr10 66828838 66828998 -73487767 - AluJo SINE Alu -10 292 122 252 0 0 0 chr10 66828998 66829026 -73487739 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1185 210 59 39 chr10 66829026 66829151 -73487614 - AluJo SINE Alu -180 122 1 3896 237 65 102 chr10 66829151 66830596 -73486169 + L1 LINE L1 340 1697 -4514 605 138 0 0 chr10 66830605 66830692 -73486073 + AluJ/FLAM SINE Alu 16 102 -210 414 39 0 0 chr10 66830703 66830755 -73486010 + (TA)n Simple_repeat Simple_repeat 2 53 0 23 33 0 0 chr10 66830755 66830785 -73485980 + AT_rich Low_complexity Low_complexity 1 30 0 1051 226 37 31 chr10 66830785 66831137 -73485628 + L1 LINE L1 1675 2028 -4183 5581 173 30 3 chr10 66831154 66832296 -73484469 + L1 LINE L1 3739 4910 -1300 7275 194 14 14 chr10 66835805 66837487 -73479278 + L1MA4 LINE L1 3649 5329 -817 17367 183 18 14 chr10 66837491 66842260 -73474505 + L1PA13 LINE L1 1110 5911 -903 2028 142 3 13 chr10 66842260 66842562 -73474203 - AluSx SINE Alu -13 299 1 17367 183 18 14 chr10 66842562 66843381 -73473384 + L1PA13 LINE L1 5911 6726 -88 393 85 0 17 chr10 66843476 66843535 -73473230 + L1PA13 LINE L1 6738 6795 -19 401 196 203 0 chr10 66843536 66843669 -73473096 - MER58B DNA MER1_type -15 326 167 4723 129 63 30 chr10 66843680 66844628 -73472137 + L1MA4 LINE L1 5317 6296 -4 494 345 163 21 chr10 66844801 66845574 -73471191 + L2 LINE L2 1859 2741 -573 184 362 16 39 chr10 66845951 66846078 -73470687 + L2 LINE L2 2940 3063 -209 416 232 141 0 chr10 66847540 66847639 -73469126 - L2 LINE L2 -2 3311 3199 340 313 28 67 chr10 66848127 66848306 -73468459 - L3 LINE CR1 -5 1572 1401 190 358 37 0 chr10 66848311 66848392 -73468373 - L3 LINE CR1 -472 1105 1022 313 294 20 0 chr10 66848436 66848538 -73468227 - U13 snRNA snRNA 0 104 1 38 61 0 0 chr10 66848699 66848765 -73468000 + AT_rich Low_complexity Low_complexity 1 66 0 277 312 281 13 chr10 66849034 66849265 -73467500 - L3 LINE CR1 -706 871 579 930 335 71 32 chr10 66849343 66849839 -73466926 - L3 LINE CR1 -6 1571 1057 465 320 77 27 chr10 66850207 66850507 -73466258 - L2 LINE L2 0 3313 2999 13121 28 1 0 chr10 66850523 66852785 -73463980 + L1PA4 LINE L1 3752 6015 -140 1321 148 42 8 chr10 66853118 66853354 -73463411 - THE1B LTR MaLR -113 251 8 2031 165 0 0 chr10 66854384 66854693 -73462072 - AluSx SINE Alu -3 309 1 395 251 97 68 chr10 66855665 66855976 -73460789 - MLT1H LTR MaLR 0 549 230 2016 146 10 79 chr10 66855988 66856391 -73460374 + THE1C LTR MaLR 1 375 0 347 269 106 19 chr10 66856392 66856600 -73460165 + MER113 DNA MER1_type? 293 518 -3 1886 164 9 18 chr10 66857086 66857428 -73459337 + MER44D DNA MER2_type 1 609 0 313 322 0 62 chr10 66858054 66858200 -73458565 + MER5A DNA MER1_type 23 159 -30 200 342 18 18 chr10 66860146 66860257 -73456508 + L3b LINE CR1 1127 1237 -346 278 303 8 42 chr10 66860382 66860501 -73456264 - MIR SINE MIR -71 137 23 268 341 0 0 chr10 66860500 66860588 -73456177 + MIR SINE MIR 173 260 -2 * 568 139 6 151 chr10 66860842 66861014 -73455751 + Tigger2a DNA MER2_type 1 147 -287 2196 164 69 4 chr10 66862300 66862762 -73454003 - L1MB4 LINE L1 -2 6178 5687 319 168 23 0 chr10 66862778 66862855 -73453910 - MSTA LTR MaLR -12 416 273 392 214 0 10 chr10 66866524 66866627 -73450138 + (TA)n Simple_repeat Simple_repeat 2 103 0 264 176 66 0 chr10 66866866 66866957 -73449808 + (TG)n Simple_repeat Simple_repeat 1 97 0 1866 166 42 21 chr10 66867343 66867723 -73449042 - MER61D LTR ERV1 0 501 114 261 227 0 34 chr10 66867771 66867859 -73448906 - L1MEc LINE L1 -4066 2330 2246 339 113 0 0 chr10 66868395 66868448 -73448317 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 2162 112 0 14 chr10 66869636 66869931 -73446834 + AluSq SINE Alu 1 291 -22 210 306 41 0 chr10 66869987 66870036 -73446729 - L2 LINE L2 -29 3243 3193 267 306 87 72 chr10 66870455 66870801 -73445964 - L2 LINE L2 -2625 689 339 2053 119 0 0 chr10 66870962 66871263 -73445502 + LTR8A LTR ERV1 1 301 -426 1193 104 0 0 chr10 66871263 66871436 -73445329 - MER4E LTR ERV1 0 766 594 1098 152 91 16 chr10 66871596 66871839 -73444926 + Tigger1 DNA MER2_type 2153 2413 -5 7883 30 1 0 chr10 66874642 66876408 -73440357 - L1HS LINE L1 -24 6131 4365 809 192 66 0 chr10 66878020 66878171 -73438594 - FRAM SINE Alu -2 164 4 328 316 89 32 chr10 66878739 66878929 -73437836 - MIR3 SINE MIR -7 201 1 214 288 41 0 chr10 66879124 66879197 -73437568 + MIR3 SINE MIR 127 202 -6 314 87 14 39 chr10 66879937 66880063 -73436702 + MADE1 DNA Mariner 1 80 0 2089 129 0 10 chr10 66880599 66880908 -73435857 + AluSx SINE Alu 1 306 -6 8221 48 5 1 chr10 66881707 66882793 -73433972 + L1P LINE L1 3210 4299 -1847 198 0 0 0 chr10 66888294 66888316 -73428449 + (A)n Simple_repeat Simple_repeat 1 22 0 192 40 0 0 chr10 66889108 66889133 -73427632 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 347 163 12 0 chr10 66889949 66890029 -73426736 + (TA)n Simple_repeat Simple_repeat 1 81 0 1040 163 20 0 chr10 66890756 66890958 -73425807 - MER2 DNA MER2_type -135 210 5 2076 108 0 74 chr10 66891666 66891990 -73424775 + AluSq SINE Alu 1 300 -13 1866 133 7 10 chr10 66893395 66893696 -73423069 + L1PB3 LINE L1 5845 6144 -10 258 250 26 0 chr10 66894273 66894349 -73422416 - MIR SINE MIR -10 252 175 2242 102 3 0 chr10 66894879 66895172 -73421593 + AluSq SINE Alu 1 294 -19 212 366 20 0 chr10 66895346 66895447 -73421318 + MIR SINE MIR 159 261 -1 1625 26 0 0 chr10 66896210 66896402 -73420363 + L1PA3 LINE L1 5959 6150 -5 256 289 12 0 chr10 66896497 66896580 -73420185 + (TA)n Simple_repeat Simple_repeat 2 85 0 21 0 0 0 chr10 66896892 66896913 -73419852 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 66896960 66896982 -73419783 + AT_rich Low_complexity Low_complexity 1 22 0 238 272 64 57 chr10 66897040 66897305 -73419460 + L1ME LINE L1 5306 5572 -598 1886 99 114 7 chr10 66898029 66898302 -73418463 + AluSg1 SINE Alu 1 302 -7 216 0 0 0 chr10 66899947 66899971 -73416794 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 222 327 47 19 chr10 66900847 66900954 -73415811 + MIR SINE MIR 36 145 -63 1835 175 0 0 chr10 66902073 66902370 -73414395 - AluSx SINE Alu -9 303 7 487 293 0 88 chr10 66903147 66903328 -73413437 - L3 LINE CR1 -92 1485 1321 236 274 0 32 chr10 66903529 66903591 -73413174 - MER5B DNA MER1_type -101 77 18 252 0 0 0 chr10 66903618 66903646 -73413119 + (CAA)n Simple_repeat Simple_repeat 3 30 0 234 401 92 33 chr10 66904576 66904880 -73411885 + L2 LINE L2 2918 3239 -33 25 0 0 0 chr10 66904891 66904916 -73411849 + AT_rich Low_complexity Low_complexity 1 25 0 501 330 157 19 chr10 66905503 66905973 -73410792 - L2 LINE L2 -932 2382 1848 487 58 145 0 chr10 66906128 66906197 -73410568 + MADE1 DNA Mariner 1 79 -1 372 313 96 87 chr10 66906442 66906889 -73409876 + L2 LINE L2 2863 3313 0 22 0 0 0 chr10 66907210 66907232 -73409533 + AT_rich Low_complexity Low_complexity 1 22 0 208 208 19 38 chr10 66907581 66907634 -73409131 - L2 LINE L2 -1 3312 3261 415 342 97 49 chr10 66908007 66908907 -73407858 + L1ME LINE L1 3643 4585 -1561 2306 114 0 3 chr10 66908997 66909305 -73407460 + AluSq SINE Alu 1 307 -6 22 35 0 0 chr10 66909523 66909552 -73407213 + AT_rich Low_complexity Low_complexity 1 29 0 236 199 96 0 chr10 66909579 66909673 -73407092 + L1ME LINE L1 5292 5397 -765 382 323 118 8 chr10 66909797 66910051 -73406714 + L1ME LINE L1 5539 5820 -301 2460 72 0 0 chr10 66910124 66910416 -73406349 + AluY SINE Alu 1 292 -19 309 341 12 54 chr10 66910734 66910901 -73405864 + HAL1b LINE L1 1189 1348 0 324 0 0 0 chr10 66911298 66911334 -73405431 + (TG)n Simple_repeat Simple_repeat 2 37 0 414 0 0 0 chr10 66912716 66912762 -73404003 + (TG)n Simple_repeat Simple_repeat 1 46 0 27 0 0 0 chr10 66913136 66913163 -73403602 + AT_rich Low_complexity Low_complexity 1 27 0 724 322 49 33 chr10 66916926 66917355 -73399410 + LTR16A LTR ERVL 20 455 -2 293 216 33 39 chr10 66918048 66918179 -73398586 + MLT1G1 LTR MaLR 1 117 -473 * 465 176 0 22 chr10 66918165 66918256 -73398509 + MLT1F1 LTR MaLR 472 560 -7 426 20 0 0 chr10 66918979 66919030 -73397735 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr10 66919368 66919390 -73397375 + AT_rich Low_complexity Low_complexity 1 22 0 226 145 81 0 chr10 66919714 66919776 -73396989 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 1675 201 0 4 chr10 66920699 66920978 -73395787 + AluJb SINE Alu 1 278 -34 336 77 0 0 chr10 66920978 66921030 -73395735 + (TCTG)n Simple_repeat Simple_repeat 2 53 0 294 124 72 21 chr10 66921030 66921127 -73395638 + (TA)n Simple_repeat Simple_repeat 2 103 0 275 146 18 0 chr10 66921175 66921230 -73395535 + (TA)n Simple_repeat Simple_repeat 2 57 0 1892 184 47 83 chr10 66921276 66921852 -73394913 - L1MD2 LINE L1 -24 6335 5781 1236 235 33 66 chr10 66921854 66922281 -73394484 - L1MD2 LINE L1 -914 5232 4827 1990 162 27 15 chr10 66922281 66922614 -73394151 + MER1B DNA MER1_type 1 337 0 1236 235 33 66 chr10 66922614 66922765 -73394000 - L1MD2 LINE L1 -1319 4827 4673 180 111 0 0 chr10 66923732 66923759 -73393006 + (A)n Simple_repeat Simple_repeat 1 27 0 221 290 16 0 chr10 66923822 66923884 -73392881 + L2 LINE L2 3210 3272 0 2301 81 0 29 chr10 66924234 66924541 -73392224 - AluY SINE Alu -13 298 1 430 279 0 9 chr10 66924868 66924979 -73391786 - MER5B DNA MER1_type 0 178 69 703 320 80 59 chr10 66925384 66925944 -73390821 - L2 LINE L2 -840 2474 1903 2113 223 113 38 chr10 66925983 66926723 -73390042 + L1MA8 LINE L1 10 805 -6225 1235 217 2 130 chr10 66926722 66927228 -73389537 + L1MA8 LINE L1 3492 3932 -3174 * 4239 114 41 123 chr10 66927229 66928126 -73388639 - LTR12 LTR ERV1 0 826 3 1623 198 80 32 chr10 66928154 66928714 -73388051 - pTR5 LTR ERV1 -1106 1332 746 10616 169 35 9 chr10 66928714 66931949 -73384816 + L1MA8 LINE L1 3927 7247 -4 412 305 107 40 chr10 66932071 66932520 -73384245 - L2 LINE L2 -1594 1720 1242 475 289 144 0 chr10 66932702 66932875 -73383890 - MIR SINE MIR 0 262 65 724 318 104 34 chr10 66932895 66933310 -73383455 + L3 LINE CR1 1124 1567 -10 242 28 0 28 chr10 66933540 66933576 -73383189 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 66934394 66934418 -73382347 + AT_rich Low_complexity Low_complexity 1 24 0 303 93 0 0 chr10 66934935 66934978 -73381787 + (TC)n Simple_repeat Simple_repeat 2 44 0 347 272 43 0 chr10 66934978 66935070 -73381695 + MIR3 SINE MIR 110 205 -3 22 0 0 0 chr10 66935098 66935120 -73381645 + AT_rich Low_complexity Low_complexity 1 22 0 1761 170 18 0 chr10 66935427 66935710 -73381055 - AluSx SINE Alu -23 289 2 183 80 0 0 chr10 66935731 66935756 -73381009 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 668 308 95 43 chr10 66935758 66935907 -73380858 - L2 LINE L2 0 3313 3173 312 27 0 0 chr10 66935907 66935944 -73380821 + (CA)n Simple_repeat Simple_repeat 1 37 0 668 308 95 43 chr10 66935944 66936142 -73380623 - L2 LINE L2 -140 3173 2948 2179 169 0 8 chr10 66936260 66936627 -73380138 + MLT1A1 LTR MaLR 1 364 -1 754 203 0 0 chr10 66936711 66936844 -73379921 - FLAM_C SINE Alu 0 133 1 913 300 83 12 chr10 66937328 66937665 -73379100 + L2 LINE L2 2898 3258 -55 273 254 0 0 chr10 66937727 66937790 -73378975 + MIR SINE MIR 200 262 0 2134 98 120 0 chr10 66937901 66938218 -73378547 - THE1A LTR MaLR 0 355 1 209 32 0 32 chr10 66938360 66938391 -73378374 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 337 203 0 0 chr10 66938813 66938887 -73377878 + MER53 DNA DNA 113 186 -3 1519 279 53 78 chr10 66939012 66939816 -73376949 + L2 LINE L2 1179 1962 -1352 590 252 45 19 chr10 66939842 66939997 -73376768 + L2 LINE L2 2647 2805 -509 29 0 0 0 chr10 66940807 66940836 -73375929 + AT_rich Low_complexity Low_complexity 1 29 0 195 69 0 0 chr10 66941604 66941633 -73375132 + (A)n Simple_repeat Simple_repeat 1 29 0 219 225 44 19 chr10 66941640 66941713 -73375052 + MER5B DNA MER1_type 87 167 -22 267 179 54 0 chr10 66941779 66941835 -73374930 - MIR SINE MIR -126 136 78 311 343 71 30 chr10 66942719 66942917 -73373848 - MIR3 SINE MIR 0 208 3 640 312 146 93 chr10 66942994 66943465 -73373300 - L3 LINE CR1 -6 1571 1127 583 218 45 74 chr10 66943465 66943708 -73373057 + MER106A DNA MER1_type 1 236 0 640 312 146 93 chr10 66943708 66944421 -73372344 - L3 LINE CR1 -450 1127 324 324 0 0 0 chr10 66945143 66945179 -73371586 + (TG)n Simple_repeat Simple_repeat 1 36 0 183 184 0 0 chr10 66945179 66945217 -73371548 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr10 66945223 66945251 -73371514 + AT_rich Low_complexity Low_complexity 1 28 0 2154 126 3 0 chr10 66945251 66945553 -73371212 + AluSx SINE Alu 1 303 -9 2256 102 10 0 chr10 66945984 66946288 -73370477 + AluSx SINE Alu 3 309 -3 1530 239 71 105 chr10 66946879 66947524 -73369241 - MLT1E2 LTR MaLR -1 625 1 948 236 23 54 chr10 66948421 66948679 -73368086 + MIR SINE MIR 13 262 0 188 333 24 49 chr10 66948953 66949076 -73367689 - L2 LINE L2 0 3272 3153 34 55 0 0 chr10 66949644 66949699 -73367066 + AT_rich Low_complexity Low_complexity 1 55 0 207 0 0 0 chr10 66950501 66950524 -73366241 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 289 287 75 59 chr10 66950579 66950833 -73365932 - HAL1 LINE L1 -999 1508 1251 319 273 136 23 chr10 66951089 66951221 -73365544 + MIR SINE MIR 4 150 -112 189 0 0 0 chr10 66952829 66952850 -73363915 + (CA)n Simple_repeat Simple_repeat 2 22 0 197 345 36 0 chr10 66953791 66953875 -73362890 + MIR3 SINE MIR 74 160 -48 714 216 208 19 chr10 66953996 66954181 -73362584 - MER5C DNA MER1_type -1 323 174 2616 99 3 29 chr10 66954181 66954555 -73362210 + THE1B LTR MaLR 1 364 0 714 216 208 19 chr10 66954555 66954638 -73362127 - MER5C DNA MER1_type -150 174 4 212 152 43 0 chr10 66955154 66955200 -73361565 + (CATA)n Simple_repeat Simple_repeat 4 51 0 795 330 78 54 chr10 66955506 66956279 -73360486 - L2 LINE L2 -342 2972 2182 1801 121 39 18 chr10 66956728 66956889 -73359876 - AluSc SINE Alu -22 287 116 272 48 24 0 chr10 66956889 66956931 -73359834 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1801 121 39 18 chr10 66956931 66957050 -73359715 - AluSc SINE Alu -193 116 1 220 361 18 57 chr10 66957420 66957644 -73359121 - L2 LINE L2 -251 3021 2814 463 105 0 0 chr10 66959387 66959463 -73357302 - L1PA16 LINE L1 0 6166 6091 299 221 0 29 chr10 66959590 66959658 -73357107 + MIR SINE MIR 99 164 -98 210 333 30 52 chr10 66959743 66959878 -73356887 + MIR SINE MIR 85 216 -46 733 216 14 7 chr10 66960905 66961053 -73355712 + MER20 DNA MER1_type 65 213 -6 264 244 23 0 chr10 66961873 66961959 -73354806 + L1MC4 LINE L1 6614 6701 -1341 365 239 0 22 chr10 66961975 66962067 -73354698 + L1MC4 LINE L1 6614 6703 -1339 2577 58 0 6 chr10 66962079 66962392 -73354373 - AluY SINE Alu 0 311 1 306 367 68 17 chr10 66962511 66962688 -73354077 + MIR3 SINE MIR 20 205 -3 288 294 88 29 chr10 66962772 66962942 -73353823 - MLT1K LTR MaLR -30 558 379 1261 174 10 0 chr10 66962988 66963189 -73353576 + AluJb SINE Alu 86 288 -24 267 395 31 19 chr10 66963245 66963407 -73353358 - MLT1K LTR MaLR -300 288 125 221 319 29 65 chr10 66964156 66964294 -73352471 + L2 LINE L2 3177 3309 -4 282 56 0 0 chr10 66964439 66964475 -73352290 + (CA)n Simple_repeat Simple_repeat 2 37 0 621 294 114 68 chr10 66964949 66965410 -73351355 + L2 LINE L2 2714 3225 -88 2227 58 38 14 chr10 66965410 66965701 -73351064 + AluY SINE Alu 1 298 -13 621 294 114 68 chr10 66965701 66965785 -73350980 + L2 LINE L2 3225 3304 -9 22 35 0 0 chr10 66966263 66966292 -73350473 + AT_rich Low_complexity Low_complexity 1 29 0 279 200 141 0 chr10 66966951 66967036 -73349729 - MER58 DNA MER1_type -2221 199 103 5617 28 5 0 chr10 66967037 66967692 -73349073 - L1PA3 LINE L1 0 6155 5498 29270 47 1 2 chr10 66967692 66971319 -73345446 + L1P LINE L1 12 3633 -2513 342 198 99 40 chr10 66971319 66971420 -73345345 - MER58 DNA MER1_type -2305 115 9 203 306 42 0 chr10 66972103 66972175 -73344590 + MIR SINE MIR 114 188 -74 1528 174 71 21 chr10 66973366 66973647 -73343118 + AluJb SINE Alu 4 298 -14 21 0 0 0 chr10 66973650 66973671 -73343094 + AT_rich Low_complexity Low_complexity 1 21 0 371 153 0 12 chr10 66973911 66973996 -73342769 + (TA)n Simple_repeat Simple_repeat 2 85 0 224 266 25 0 chr10 66974137 66974216 -73342549 + (TA)n Simple_repeat Simple_repeat 1 81 0 209 286 26 0 chr10 66975707 66975784 -73340981 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 2507 137 19 43 chr10 66975815 66976282 -73340483 - L1M2 LINE L1 -540 5772 5317 185 207 0 35 chr10 66976288 66976346 -73340419 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 2222 86 17 0 chr10 66976379 66976669 -73340096 - AluSp SINE Alu -18 295 1 2956 185 41 25 chr10 66976671 66977384 -73339381 - L1M2 LINE L1 -815 5331 4608 267 175 0 50 chr10 66977682 66977762 -73339003 - L1MA10 LINE L1 -3 6331 6256 3701 222 97 33 chr10 66977784 66978453 -73338312 - L1M4 LINE L1 -1197 4949 4324 15806 134 26 30 chr10 66978453 66979188 -73337577 - Tigger4(Zombi) DNA MER2_type -1 2730 1994 1974 86 0 8 chr10 66979188 66979443 -73337322 + AluSq SINE Alu 54 306 -7 288 0 0 0 chr10 66979445 66979477 -73337288 + (TAG)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 66979480 66979503 -73337262 + (TCG)n Simple_repeat Simple_repeat 2 24 0 15806 134 26 30 chr10 66979503 66981501 -73335264 - Tigger4(Zombi) DNA MER2_type -740 1991 1 3701 222 97 33 chr10 66981501 66981584 -73335181 - L1M4 LINE L1 -1822 4324 4248 234 91 0 0 chr10 66981584 66981617 -73335148 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 3701 222 97 33 chr10 66981617 66982226 -73334539 - L1M4 LINE L1 -1898 4248 3500 451 260 7 14 chr10 66982225 66982371 -73334394 - L1M4 LINE L1 -3493 2653 2509 * 235 213 0 0 chr10 66982942 66982989 -73333776 + CT-rich Low_complexity Low_complexity 1 47 0 1595 191 0 92 chr10 66984922 66985347 -73331418 - MLT1B LTR MaLR -4 386 1 339 287 86 46 chr10 66985412 66985586 -73331179 - L3 LINE CR1 -3 1574 1394 437 322 49 6 chr10 66986758 66986941 -73329824 - MIR3 SINE MIR -1 207 17 23 33 0 0 chr10 66987019 66987049 -73329716 + AT_rich Low_complexity Low_complexity 1 30 0 201 167 0 0 chr10 66987964 66988000 -73328765 + A-rich Low_complexity Low_complexity 1 36 0 1990 113 3 68 chr10 66988255 66988581 -73328184 - AluSx SINE Alu -3 309 5 258 125 0 0 chr10 66989277 66989325 -73327440 + (TC)n Simple_repeat Simple_repeat 1 48 0 357 244 32 73 chr10 66990495 66990618 -73326147 + Zaphod DNA AcHobo 3914 4031 0 229 329 139 56 chr10 66991102 66991325 -73325440 + L2 LINE L2 2439 2642 -672 1139 163 11 0 chr10 66991325 66991509 -73325256 + MER5A DNA MER1_type 1 186 -3 229 329 139 56 chr10 66991509 66991696 -73325069 + L2 LINE L2 2642 2883 -431 1315 211 87 19 chr10 66992137 66992550 -73324215 - Zaphod DNA AcHobo -1 4030 3590 * 1925 264 87 17 chr10 66992539 66993425 -73323340 - Zaphod DNA AcHobo -3039 992 2 1721 184 25 78 chr10 66993567 66993964 -73322801 + MLT2C2 LTR ERVL 24 399 -65 228 348 0 0 chr10 66994130 66994199 -73322566 + L2 LINE L2 3116 3184 -88 255 108 48 60 chr10 66995314 66995397 -73321368 + (TATAA)n Simple_repeat Simple_repeat 1 82 0 524 244 17 9 chr10 66995400 66995515 -73321250 + L2 LINE L2 3193 3308 -5 2218 110 3 3 chr10 66997266 66997575 -73319190 + AluSx SINE Alu 1 309 -3 360 257 53 18 chr10 66997707 66997820 -73318945 - MER5B DNA MER1_type -61 117 1 316 259 9 17 chr10 66998114 66998230 -73318535 + Charlie7 DNA MER1_type 2498 2612 0 2405 74 0 0 chr10 66998812 66999108 -73317657 + AluY SINE Alu 1 296 -15 1582 186 14 31 chr10 67001623 67001973 -73314792 + MER2 DNA MER2_type 1 344 0 541 343 105 39 chr10 67003091 67003423 -73313342 + L3 LINE CR1 929 1282 -295 466 308 34 82 chr10 67003763 67003971 -73312794 + L3 LINE CR1 1374 1571 -6 383 308 109 0 chr10 67004818 67004974 -73311791 + MLT1J LTR MaLR 16 188 -323 2649 166 11 35 chr10 67004999 67005301 -73311464 - L1P LINE L1 -842 5304 5019 1873 162 13 0 chr10 67005301 67005603 -73311162 - AluSx SINE Alu -6 306 1 2649 166 11 35 chr10 67005603 67005842 -73310923 - L1P LINE L1 -1127 5019 4776 1240 92 0 17 chr10 67006070 67006243 -73310522 + L1PB1 LINE L1 5507 5676 -498 2214 88 3 9 chr10 67006244 67006561 -73310204 + L1PB1 LINE L1 5836 6150 -1 2409 70 0 7 chr10 67006582 67006880 -73309885 + AluY SINE Alu 1 296 -15 3491 104 18 6 chr10 67006881 67007380 -73309385 + L1PA11 LINE L1 5664 6168 -6 236 249 95 44 chr10 67007458 67007596 -73309169 + MLT1J2 LTR MaLR 300 401 -49 183 80 0 0 chr10 67008174 67008199 -73308566 + (TCCC)n Simple_repeat Simple_repeat 4 28 0 181 217 43 22 chr10 67008965 67009011 -73307754 - L2 LINE L2 0 3272 3226 1640 109 4 0 chr10 67009163 67009392 -73307373 - THE1C LTR MaLR -3 372 143 803 223 97 0 chr10 67009601 67009807 -73306958 - MIR SINE MIR -4 258 33 282 132 0 0 chr10 67010062 67010115 -73306650 + (GA)n Simple_repeat Simple_repeat 2 54 0 266 114 0 0 chr10 67011031 67011066 -73305699 - Alu SINE Alu -269 39 5 22 0 0 0 chr10 67011393 67011415 -73305350 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr10 67011473 67011516 -73305249 + (CA)n Simple_repeat Simple_repeat 2 44 0 548 325 50 39 chr10 67011556 67011836 -73304929 + L2 LINE L2 3031 3313 0 233 276 0 0 chr10 67012645 67012703 -73304062 + (CAT)n Simple_repeat Simple_repeat 2 59 0 207 100 0 0 chr10 67012947 67012977 -73303788 + (GAAAA)n Simple_repeat Simple_repeat 5 34 0 4739 157 40 0 chr10 67014760 67015545 -73301220 - MSTA-int LTR MaLR -835 816 1 2711 131 24 5 chr10 67015545 67015965 -73300800 - MSTA LTR MaLR 0 428 1 312 240 87 146 chr10 67016680 67016934 -73299831 + L3 LINE CR1 1047 1285 -292 399 310 148 7 chr10 67017100 67017255 -73299510 - MER20B DNA MER1_type -606 177 1 363 243 81 9 chr10 67017262 67017373 -73299392 - MIR SINE MIR -27 235 117 1456 320 36 33 chr10 67018988 67019664 -73297101 + L2 LINE L2 2459 3140 -173 297 236 34 34 chr10 67020195 67020284 -73296481 + L2 LINE L2 2472 2560 -754 21 0 0 0 chr10 67022098 67022119 -73294646 + AT_rich Low_complexity Low_complexity 1 21 0 4778 113 4 6 chr10 67022481 67023196 -73293569 - L1P LINE L1 -1911 4235 3522 291 313 172 26 chr10 67026114 67026341 -73290424 - MLT1J2 LTR MaLR 0 450 191 632 119 10 0 chr10 67026463 67026564 -73290201 + L1P LINE L1 2046 2147 -3999 * 7804 46 1 6 chr10 67026560 67027583 -73289182 - L1P LINE L1 -2581 3565 2548 674 294 110 34 chr10 67029090 67029909 -73286856 + L1 LINE L1 3047 3938 -2208 330 328 0 1 chr10 67030690 67030790 -73285975 + MIR SINE MIR 8 106 -102 1945 196 32 0 chr10 67030793 67031140 -73285625 - MLT1A1 LTR MaLR -5 360 3 201 247 101 45 chr10 67031160 67031249 -73285516 + MIR SINE MIR 128 221 -41 25 0 0 0 chr10 67031261 67031286 -73285479 + AT_rich Low_complexity Low_complexity 1 25 0 1720 161 7 4 chr10 67031287 67031567 -73285198 - AluJb SINE Alu -21 291 11 915 253 90 4 chr10 67031592 67031825 -73284940 - MIR SINE MIR -5 257 5 7318 134 22 6 chr10 67032156 67033375 -73283390 + Tigger1 DNA MER2_type 450 1688 -730 1474 207 28 14 chr10 67035907 67036197 -73280568 + MLT2B2 LTR ERVL 22 315 -200 792 97 9 18 chr10 67036331 67036444 -73280321 + AluSg/x SINE Alu 187 298 -11 25 90 0 0 chr10 67036683 67036750 -73280015 + AT_rich Low_complexity Low_complexity 1 67 0 319 317 68 43 chr10 67036877 67037038 -73279727 - HAL1b LINE L1 -1145 203 39 2138 114 4 0 chr10 67037097 67037408 -73279357 - AluSx SINE Alu 0 313 2 24 32 0 0 chr10 67037417 67037448 -73279317 + AT_rich Low_complexity Low_complexity 1 31 0 978 87 0 8 chr10 67037448 67037574 -73279191 - AluSg SINE Alu -185 125 1 228 346 0 0 chr10 67037919 67037971 -73278794 + MER58 DNA MER1_type 6 57 -2363 267 326 0 0 chr10 67038029 67038121 -73278644 + T-rich Low_complexity Low_complexity 1 92 0 1384 180 8 8 chr10 67038248 67038522 -73278243 + AluJb SINE Alu 35 308 0 2367 120 56 8 chr10 67038524 67038898 -73277867 - MSTA LTR MaLR -36 392 1 357 253 12 0 chr10 67038903 67038986 -73277779 + L1ME3A LINE L1 5802 5885 -285 643 160 90 64 chr10 67039003 67039095 -73277670 + MER97c DNA MER1_type? 20 119 -971 1895 140 0 50 chr10 67039095 67039417 -73277348 - AluSx SINE Alu -4 308 3 643 160 90 64 chr10 67039417 67039480 -73277285 + MER97c DNA MER1_type? 119 179 -911 1132 108 0 6 chr10 67039749 67039906 -73276859 + AluSg/x SINE Alu 141 296 -16 5375 143 30 8 chr10 67039920 67041272 -73275493 + L1PA16 LINE L1 4781 6151 -15 2046 106 22 0 chr10 67041327 67041624 -73275141 + AluSg1 SINE Alu 1 303 0 294 298 79 71 chr10 67041919 67042171 -73274594 - L1MC/D LINE L1 -1985 5823 5570 248 273 20 53 chr10 67042259 67042409 -73274356 - L1MC/D LINE L1 -2367 5441 5297 5861 68 22 9 chr10 67042586 67043349 -73273416 - LTR17 LTR ERV1 -7 773 1 1525 222 62 70 chr10 67043349 67043953 -73272812 + L1MC5 LINE L1 6890 7490 -471 1088 160 0 18 chr10 67043953 67044122 -73272643 + FRAM SINE Alu 1 166 0 8322 211 12 49 chr10 67044407 67044877 -73271888 - L1 LINE L1 -1468 6097 5611 2246 91 14 0 chr10 67044877 67045174 -73271591 + AluSq SINE Alu 1 301 -12 8322 211 12 49 chr10 67045174 67046875 -73269890 - L1 LINE L1 -1954 5611 4005 2273 116 98 5 chr10 67047005 67047412 -73269353 - L1 LINE L1 -4114 3451 3007 21 36 0 0 chr10 67047482 67047510 -73269255 + AT_rich Low_complexity Low_complexity 1 28 0 7912 41 1 1 chr10 67047510 67048940 -73267825 - L1PA5 LINE L1 -2 6152 4725 633 194 37 0 chr10 67048982 67049090 -73267675 + L1M1 LINE L1 171 282 -7283 322 206 27 0 chr10 67049093 67049166 -73267599 - L1 LINE L1 -6987 578 504 190 384 107 50 chr10 67049549 67049708 -73267057 + L2 LINE L2 3075 3242 -30 1598 187 16 29 chr10 67049729 67049862 -73266903 + AluJo SINE Alu 7 140 -172 2378 64 3 14 chr10 67049862 67050148 -73266617 + AluSp SINE Alu 6 290 -23 180 0 0 0 chr10 67050148 67050168 -73266597 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1598 187 16 29 chr10 67050177 67050353 -73266412 + AluJo SINE Alu 140 312 0 227 192 0 0 chr10 67051353 67051405 -73265360 + (TA)n Simple_repeat Simple_repeat 1 52 0 317 204 38 29 chr10 67051928 67052021 -73264744 - MER5A DNA MER1_type -30 159 57 204 250 0 0 chr10 67052036 67052076 -73264689 + MER5C DNA MER1_type 1 40 -284 2090 136 0 3 chr10 67052159 67052454 -73264311 - AluSx SINE Alu -18 294 1 353 262 107 48 chr10 67052550 67052718 -73264047 - MIR3 SINE MIR -15 193 16 785 204 0 0 chr10 67053362 67053494 -73263271 + FLAM_A SINE Alu 2 133 0 242 194 0 32 chr10 67053667 67053729 -73263036 + (TA)n Simple_repeat Simple_repeat 1 60 0 5757 218 30 14 chr10 67054657 67056209 -73260556 - L1PA15-16 LINE L1 -3612 3237 1664 1379 138 4 39 chr10 67056590 67056782 -73259983 - AluJb SINE Alu -4 308 123 2273 84 0 0 chr10 67056782 67057095 -73259670 + AluSx SINE Alu 1 313 0 1379 138 4 39 chr10 67057095 67057133 -73259632 - AluJb SINE Alu -189 123 85 216 86 0 0 chr10 67057656 67057691 -73259074 + (A)n Simple_repeat Simple_repeat 1 35 0 2254 104 3 3 chr10 67057695 67058004 -73258761 + AluSc SINE Alu 1 309 0 262 357 36 41 chr10 67058452 67058648 -73258117 - MIR SINE MIR -52 210 16 815 164 0 0 chr10 67058870 67058992 -73257773 - FLAM_C SINE Alu -21 122 1 357 200 1 0 chr10 67059089 67059158 -73257607 + AluJ/FLAM SINE Alu 2 63 -239 248 266 31 78 chr10 67059241 67059369 -73257396 + L2 LINE L2 2271 2392 -922 721 304 12 43 chr10 67059723 67059976 -73256789 + MIR SINE MIR 18 262 0 324 276 80 9 chr10 67060167 67060354 -73256411 - L3 LINE CR1 -74 1503 1249 2098 180 91 35 chr10 67060354 67060814 -73255951 + MER66B LTR ERV1 1 486 0 302 215 130 75 chr10 67061222 67061439 -73255326 - MIR SINE MIR -44 218 1 1302 184 28 0 chr10 67061561 67061779 -73254986 + MER58A DNA MER1_type 1 224 0 2566 56 0 7 chr10 67062537 67062840 -73253925 - AluY SINE Alu -10 301 1 792 180 0 0 chr10 67064057 67064185 -73252580 + FLAM_C SINE Alu 1 128 -5 195 100 0 0 chr10 67064344 67064374 -73252391 + (CAATT)n Simple_repeat Simple_repeat 4 33 0 807 220 30 3 chr10 67064595 67064795 -73251970 + L1ME1 LINE L1 5333 5536 -628 1345 224 49 65 chr10 67064823 67065194 -73251571 + L1ME1 LINE L1 5677 6196 -138 3314 67 20 2 chr10 67065194 67065599 -73251166 - L1PA7 LINE L1 0 6154 5743 1345 224 49 65 chr10 67065599 67065736 -73251029 + L1ME1 LINE L1 6196 6334 0 565 287 109 30 chr10 67065937 67066167 -73250598 + MIR SINE MIR 15 262 0 1886 157 3 14 chr10 67066417 67066703 -73250062 + AluJo SINE Alu 9 291 -21 766 213 47 35 chr10 67066717 67066971 -73249794 + L1MC5 LINE L1 7604 7860 -101 2537 74 0 0 chr10 67068502 67068812 -73247953 - AluY SINE Alu 0 311 2 21 0 0 0 chr10 67069107 67069128 -73247637 + GC_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr10 67069213 67069244 -73247521 + (GGGAGA)n Simple_repeat Simple_repeat 6 36 0 22 0 0 0 chr10 67069386 67069408 -73247357 + GC_rich Low_complexity Low_complexity 1 22 0 192 152 0 0 chr10 67069408 67069441 -73247324 + A-rich Low_complexity Low_complexity 1 33 0 2013 156 0 3 chr10 67069976 67070283 -73246482 - AluJb SINE Alu -6 306 1 1720 164 39 39 chr10 67070781 67071093 -73245672 + AluJb SINE Alu 1 312 0 1036 233 0 0 chr10 67071217 67071406 -73245359 + MER5A DNA MER1_type 1 189 0 196 219 0 0 chr10 67071420 67071461 -73245304 - MIR SINE MIR -108 154 114 209 236 42 42 chr10 67071630 67071702 -73245063 + MIR SINE MIR 118 189 -73 514 153 0 0 chr10 67072128 67072200 -73244565 - AluJ/FRAM SINE Alu -18 294 223 1202 135 37 10 chr10 67072324 67072563 -73244202 - MLT2D LTR ERVL -132 282 1 1859 157 10 7 chr10 67072587 67072880 -73243885 + AluJb SINE Alu 1 294 -18 26 0 0 0 chr10 67072931 67072957 -73243808 + AT_rich Low_complexity Low_complexity 1 26 0 1997 139 10 13 chr10 67073145 67073446 -73243319 + AluJb SINE Alu 1 300 -12 963 129 8 0 chr10 67076945 67077077 -73239688 + FLAM_C SINE Alu 1 133 0 2035 122 31 7 chr10 67077187 67077361 -73239404 - AluSc SINE Alu -8 301 116 255 93 0 0 chr10 67077361 67077404 -73239361 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2035 122 31 7 chr10 67077404 67077523 -73239242 - AluSc SINE Alu -193 116 1 2393 107 0 0 chr10 67077526 67077836 -73238929 - AluSg SINE Alu 0 310 1 1334 286 52 17 chr10 67079082 67079818 -73236947 + L2 LINE L2 2533 3296 -17 908 170 50 6 chr10 67080066 67080248 -73236517 + MIR SINE MIR 49 238 -24 410 86 0 17 chr10 67080346 67080404 -73236361 + AluY SINE Alu 30 86 -224 12253 145 17 31 chr10 67080623 67080812 -73235953 - Ricksha_c DNA DNA -1208 2046 1856 2072 137 0 20 chr10 67080812 67081118 -73235647 + AluSq SINE Alu 1 300 -13 12253 145 17 31 chr10 67081118 67082994 -73233771 - Ricksha_c DNA DNA -1398 1856 10 1501 217 133 41 chr10 67083014 67083525 -73233240 - L1MA7 LINE L1 -282 6009 5452 2663 141 33 21 chr10 67083537 67083964 -73232801 - MSTB1 LTR MaLR 0 432 1 1589 179 63 55 chr10 67084192 67084555 -73232210 + MLT1B LTR MaLR 4 369 -21 1832 211 25 47 chr10 67085190 67085663 -73231102 - LTR37B LTR ERV1 0 468 6 1867 184 0 0 chr10 67086373 67086667 -73230098 + AluJb SINE Alu 1 294 -18 4209 159 40 15 chr10 67086889 67087632 -73229133 + L1MB5 LINE L1 5413 6174 0 559 210 98 24 chr10 67087932 67088098 -73228667 - MIR3 SINE MIR -7 201 21 3573 79 37 0 chr10 67088644 67089125 -73227640 - MER4E LTR ERV1 0 766 268 306 0 0 0 chr10 67089541 67089575 -73227190 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 217 175 50 chr10 67089818 67089938 -73226827 + L2 LINE L2 3138 3272 0 2682 103 5 36 chr10 67091147 67091484 -73225281 + THE1C LTR MaLR 1 327 -48 2114 113 3 0 chr10 67091484 67091805 -73224960 + AluSx SINE Alu 1 322 0 2682 103 5 36 chr10 67091805 67091853 -73224912 + THE1C LTR MaLR 327 375 0 381 302 93 14 chr10 67091853 67091992 -73224773 - MIR SINE MIR -108 154 5 24 0 0 0 chr10 67092207 67092231 -73224534 + AT_rich Low_complexity Low_complexity 1 24 0 2004 175 61 0 chr10 67092448 67092791 -73223974 + MLT1A1 LTR MaLR 1 364 -1 180 182 30 0 chr10 67092796 67092829 -73223936 + MER5B DNA MER1_type 7 40 -138 2231 123 0 0 chr10 67092879 67093181 -73223584 + AluSx SINE Alu 1 302 -10 312 223 32 75 chr10 67093196 67093290 -73223475 + MER5B DNA MER1_type 78 167 -11 1921 122 7 4 chr10 67093673 67093951 -73222814 + AluSx SINE Alu 25 303 -9 2312 100 0 3 chr10 67095437 67095736 -73221029 - AluSc SINE Alu -11 298 1 524 303 38 96 chr10 67095825 67096139 -73220626 + L2 LINE L2 2972 3267 -5 208 283 33 0 chr10 67096167 67096227 -73220538 - MIR3 SINE MIR -6 202 141 243 146 0 0 chr10 67096740 67096781 -73219984 + Alu SINE Alu 1 41 -261 725 174 61 0 chr10 67096936 67097068 -73219697 - AluJo SINE Alu -171 141 2 1112 257 116 47 chr10 67097168 67097807 -73218958 - L1ME4a LINE L1 -57 6064 5382 3884 186 122 3 chr10 67097891 67098629 -73218136 - LTR1B LTR ERV1 0 826 1 1405 217 49 41 chr10 67098676 67099021 -73217744 + LTR16C LTR ERVL 144 491 0 568 271 112 54 chr10 67100573 67100924 -73215841 - MLT1I LTR MaLR -2 407 38 452 275 16 85 chr10 67101280 67101409 -73215356 + MER5A DNA MER1_type 7 121 -68 2293 83 0 3 chr10 67101409 67101698 -73215067 - AluSg1 SINE Alu -21 288 1 452 275 16 85 chr10 67101698 67101757 -73215008 + MER5A DNA MER1_type 121 182 -7 1543 186 3 18 chr10 67102719 67103004 -73213761 + AluJo SINE Alu 2 282 -30 1515 108 5 0 chr10 67104050 67104254 -73212511 + AluSp SINE Alu 104 308 -5 3772 103 0 6 chr10 67104281 67104796 -73211969 + L1PB1 LINE L1 5638 6149 -2 1921 157 0 13 chr10 67106012 67106311 -73210454 + AluJo SINE Alu 1 295 -17 2010 212 78 16 chr10 67106708 67107207 -73209558 + MLT1F LTR MaLR 13 542 0 1978 88 57 11 chr10 67107979 67108262 -73208503 - AluSg1 SINE Alu -13 296 1 269 185 111 25 chr10 67108264 67108345 -73208420 - MIR SINE MIR -70 192 105 285 356 62 18 chr10 67108480 67108669 -73208096 + MIR3 SINE MIR 8 201 -44 181 310 17 0 chr10 67108686 67108744 -73208021 + MIR SINE MIR 84 142 -120 746 270 86 59 chr10 67108806 67109214 -73207551 + LTR16A LTR ERVL 25 443 -7 2448 77 0 13 chr10 67109612 67109925 -73206840 + AluSp SINE Alu 1 309 -4 258 32 0 0 chr10 67109946 67109977 -73206788 + (CA)n Simple_repeat Simple_repeat 2 32 0 799 147 18 94 chr10 67109995 67110052 -73206713 + L1MA9 LINE L1 5780 5840 -472 2177 99 0 3 chr10 67110052 67110335 -73206430 + AluSx SINE Alu 9 290 -22 799 147 18 94 chr10 67110335 67110447 -73206318 + L1MA9 LINE L1 5840 5936 -376 2230 107 3 0 chr10 67110637 67110927 -73205838 + AluSp SINE Alu 1 291 -22 523 234 0 143 chr10 67110990 67111068 -73205697 - MER102a DNA MER1_type -1087 330 242 1159 228 104 19 chr10 67111068 67111384 -73205381 - MER2 DNA MER2_type -1 343 1 523 234 0 143 chr10 67111384 67111514 -73205251 - MER102a DNA MER1_type -1175 242 152 2327 88 0 13 chr10 67111525 67111833 -73204932 - AluSx SINE Alu -8 304 1 233 250 66 13 chr10 67113321 67113397 -73203368 - MLT1K LTR MaLR 0 588 509 411 308 19 0 chr10 67113817 67113924 -73202841 - MER5A DNA MER1_type -77 112 4 268 309 40 60 chr10 67113934 67114083 -73202682 + MLT1K LTR MaLR 8 153 -435 310 258 0 0 chr10 67114126 67114188 -73202577 + L2 LINE L2 3248 3309 -4 1893 155 0 0 chr10 67114224 67114531 -73202234 + AluJb SINE Alu 1 307 0 446 289 74 66 chr10 67114645 67114695 -73202070 + MLT1L LTR MaLR 370 418 -197 2320 92 0 3 chr10 67114695 67114998 -73201767 + AluSg1 SINE Alu 1 302 -7 2373 89 3 9 chr10 67115006 67115321 -73201444 + AluSq SINE Alu 1 313 0 446 289 74 66 chr10 67115321 67115503 -73201262 + MLT1L LTR MaLR 424 613 -2 210 326 29 117 chr10 67116208 67116628 -73200137 + L2 LINE L2 2811 3193 -79 288 0 0 0 chr10 67118385 67118417 -73198348 + (TG)n Simple_repeat Simple_repeat 2 33 0 2210 122 0 10 chr10 67119082 67119393 -73197372 + AluSx SINE Alu 1 308 -4 249 262 119 71 chr10 67119522 67119648 -73197117 + MIR3 SINE MIR 38 169 -39 269 281 21 31 chr10 67119842 67119938 -73196827 + HAL1 LINE L1 28 122 -2385 1160 271 33 71 chr10 67120054 67120262 -73196503 + HAL1 LINE L1 131 345 -2162 2166 106 3 3 chr10 67120262 67120554 -73196211 + AluSx SINE Alu 3 294 -18 1160 271 33 71 chr10 67120554 67120570 -73196195 + HAL1 LINE L1 345 360 -2147 1578 182 55 7 chr10 67120570 67120684 -73196081 + AluJb SINE Alu 6 113 -199 360 0 0 0 chr10 67120684 67120724 -73196041 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1578 182 55 7 chr10 67120724 67120900 -73195865 + AluJb SINE Alu 113 310 -2 1160 271 33 71 chr10 67120900 67121184 -73195581 + HAL1 LINE L1 360 621 -1886 552 206 62 14 chr10 67121194 67121340 -73195425 + HAL1 LINE L1 1725 1877 -630 1159 292 56 26 chr10 67121742 67122375 -73194390 - L1ME3A LINE L1 -261 5917 5264 239 280 21 0 chr10 67122489 67122582 -73194183 - L1ME2 LINE L1 0 6164 6070 706 196 18 0 chr10 67122605 67122746 -73194019 - FLAM_A SINE Alu 0 143 1 295 255 119 82 chr10 67122746 67123134 -73193631 - L1ME3A LINE L1 -966 5180 4779 1414 189 55 101 chr10 67123274 67123756 -73193009 - MER39 LTR ERV1 -25 682 6 463 257 62 7 chr10 67123945 67124089 -73192676 + MIR3 SINE MIR 55 206 -2 2333 95 0 7 chr10 67124522 67124827 -73191938 + AluSg SINE Alu 1 303 -7 24 0 0 0 chr10 67124941 67124965 -73191800 + AT_rich Low_complexity Low_complexity 1 24 0 335 228 76 11 chr10 67125006 67125098 -73191667 - MIR3 SINE MIR -21 187 90 391 180 41 128 chr10 67125205 67125339 -73191426 - MER69 DNA AcHobo -1 2525 2408 2287 107 3 3 chr10 67125339 67125648 -73191117 + AluSx SINE Alu 1 309 -3 391 180 41 128 chr10 67125648 67125685 -73191080 - MER69 DNA AcHobo -118 2408 2369 259 62 0 0 chr10 67125818 67125850 -73190915 - MER69 DNA AcHobo -2494 32 1 234 242 32 0 chr10 67126073 67126135 -73190630 - MIR SINE MIR -121 141 78 216 0 0 0 chr10 67126800 67126824 -73189941 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 300 311 47 16 chr10 67126910 67127100 -73189665 + L1ME2 LINE L1 5749 5944 -220 269 159 16 0 chr10 67127309 67127372 -73189393 + CT-rich Low_complexity Low_complexity 1 64 0 465 90 0 0 chr10 67127831 67127898 -73188867 + (TC)n Simple_repeat Simple_repeat 2 68 0 294 29 0 0 chr10 67127899 67127934 -73188831 + (CA)n Simple_repeat Simple_repeat 2 36 0 12358 78 3 0 chr10 67128316 67129862 -73186903 + THE1B-int LTR MaLR 31 1580 0 2527 129 5 27 chr10 67129862 67130234 -73186531 + THE1B LTR MaLR 1 364 0 530 273 8 0 chr10 67130580 67130701 -73186064 + MIR SINE MIR 2 123 -139 2194 116 3 0 chr10 67130708 67131002 -73185763 - AluSx SINE Alu -17 295 1 1818 157 0 18 chr10 67131277 67131587 -73185178 - AluSx SINE Alu 0 305 1 2134 120 0 0 chr10 67132202 67132502 -73184263 + AluSx SINE Alu 1 300 -12 400 300 31 31 chr10 67132683 67132813 -73183952 - MIR3 SINE MIR -1 207 78 676 299 68 35 chr10 67133073 67133441 -73183324 - MLT1K LTR MaLR -57 531 152 1030 217 16 16 chr10 67133506 67133750 -73183015 - MIR SINE MIR -5 257 14 346 343 39 44 chr10 67135136 67135317 -73181448 + MIR3 SINE MIR 4 183 -25 211 250 0 0 chr10 67135407 67135451 -73181314 - MIR SINE MIR -113 149 106 487 276 80 25 chr10 67135833 67135996 -73180769 + MIR3 SINE MIR 19 190 -18 466 160 0 0 chr10 67136436 67136511 -73180254 + AluJ/FRAM SINE Alu 230 304 -8 1687 235 71 60 chr10 67136975 67137113 -73179652 + MLT1F LTR MaLR 1 136 -406 1733 129 38 4 chr10 67137113 67137398 -73179367 - AluJb SINE Alu 0 312 17 1687 235 71 60 chr10 67137398 67137795 -73178970 + MLT1F LTR MaLR 136 542 0 457 246 251 0 chr10 67140060 67140275 -73176490 + L1ME4a LINE L1 5849 6117 -4 255 224 101 18 chr10 67140776 67140997 -73175768 + L1ME3A LINE L1 5674 5946 -224 421 302 58 6 chr10 67141216 67141388 -73175377 - MIR SINE MIR -15 247 67 1845 93 41 33 chr10 67141575 67141845 -73174920 + L1PA11 LINE L1 5903 6174 0 226 293 243 21 chr10 67142426 67142566 -73174199 + MIR3 SINE MIR 33 203 -5 821 80 35 0 chr10 67143249 67143362 -73173403 + AluSg/x SINE Alu 179 295 -17 207 147 27 0 chr10 67143374 67143416 -73173349 - MIR SINE MIR -64 144 100 6006 121 52 91 chr10 67143883 67144192 -73172573 - Tigger3b DNA MER2_type -1825 1203 884 2333 97 0 0 chr10 67144192 67144482 -73172283 + AluSg SINE Alu 1 290 -20 6006 121 52 91 chr10 67144482 67145061 -73171704 - Tigger3b DNA MER2_type -2144 884 374 2186 111 0 10 chr10 67145061 67145358 -73171407 + AluSx SINE Alu 1 294 -18 6006 121 52 91 chr10 67145358 67145717 -73171048 - Tigger3b DNA MER2_type -2654 374 3 1162 123 70 11 chr10 67145717 67145902 -73170863 + Tigger3(Golem) DNA MER2_type 2152 2347 -682 1463 267 34 18 chr10 67145942 67146448 -73170317 - Charlie7 DNA MER1_type -260 2352 1839 8882 142 19 19 chr10 67146461 67149002 -73167763 - L1MA2 LINE L1 0 6304 3767 1429 201 0 43 chr10 67149540 67149843 -73166922 - L1PA15-16 LINE L1 -6116 733 444 992 313 35 6 chr10 67150313 67150652 -73166113 - L1M2 LINE L1 -6399 450 102 499 240 29 10 chr10 67150658 67150762 -73166003 - MLT1A1 LTR MaLR -80 285 180 305 115 17 23 chr10 67150877 67150951 -73165814 + L1M3 LINE L1 5449 5521 -782 197 0 71 0 chr10 67150967 67150995 -73165770 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2197 111 3 0 chr10 67151053 67151360 -73165405 - AluSx SINE Alu -4 308 1 1848 162 14 3 chr10 67152282 67152578 -73164187 - AluJo SINE Alu -13 299 1 1064 177 101 5 chr10 67152609 67152722 -73164043 + AluJo SINE Alu 1 102 -210 441 0 0 0 chr10 67152722 67152771 -73163994 + (CA)n Simple_repeat Simple_repeat 2 50 0 1064 177 101 5 chr10 67152771 67152866 -73163899 + AluJo SINE Alu 102 229 -83 1593 233 110 30 chr10 67153161 67153663 -73163102 + MLT1F LTR MaLR 1 542 0 271 318 15 0 chr10 67154511 67154577 -73162188 + MIR SINE MIR 4 70 -192 782 268 82 60 chr10 67155781 67156278 -73160487 - MLT1J LTR MaLR -1 510 3 1537 171 0 82 chr10 67156466 67156782 -73159983 + AluJb SINE Alu 1 290 -22 492 263 80 80 chr10 67157042 67157381 -73159384 + MLT1I LTR MaLR 71 409 0 1465 230 43 41 chr10 67157666 67158105 -73158660 - MER39 LTR ERV1 -9 698 259 283 183 323 11 chr10 67158081 67158174 -73158591 - MER34 LTR ERV1 -420 122 1 * 1921 80 0 0 chr10 67158595 67158861 -73157904 - AluY SINE Alu 0 307 42 986 185 13 26 chr10 67159213 67159445 -73157320 - L1MA8 LINE L1 -3 6288 6060 246 167 21 0 chr10 67160697 67160745 -73156020 - L1MA8 LINE L1 -218 6073 6025 2192 92 3 20 chr10 67160745 67161049 -73155716 - AluSq SINE Alu -14 299 1 979 198 34 0 chr10 67161863 67162040 -73154725 - MER58B DNA MER1_type 0 341 159 9808 182 26 8 chr10 67162049 67163480 -73153285 + L1PA16 LINE L1 3140 4543 -1623 1856 149 48 7 chr10 67163480 67163775 -73152990 - AluSx SINE Alu -5 307 1 9808 182 26 8 chr10 67163775 67164640 -73152125 + L1PA16 LINE L1 4543 5391 -775 2307 98 0 3 chr10 67164640 67164936 -73151829 + AluSg1 SINE Alu 4 298 -11 9808 182 26 8 chr10 67164936 67165050 -73151715 + L1PA16 LINE L1 5391 5501 -665 1760 199 3 3 chr10 67165050 67165361 -73151404 + AluJo SINE Alu 1 311 -1 9808 182 26 8 chr10 67165361 67165916 -73150849 + L1PA16 LINE L1 5501 6164 -2 265 247 12 25 chr10 67165922 67166003 -73150762 - MER58B DNA MER1_type -185 156 77 8007 29 6 0 chr10 67166003 67167278 -73149487 + L1PA4 LINE L1 4873 6153 -2 1901 121 37 0 chr10 67167469 67167774 -73148991 - AluSx SINE Alu 0 315 1 567 223 137 29 chr10 67167867 67168042 -73148723 + MIR SINE MIR 64 257 -5 701 161 110 0 chr10 67168208 67168326 -73148439 + FLAM_C SINE Alu 3 133 0 2091 121 95 20 chr10 67168696 67169043 -73147722 - THE1C LTR MaLR -2 373 1 260 202 32 128 chr10 67169717 67169745 -73147020 + MIR SINE MIR 124 153 -109 2383 86 0 13 chr10 67169745 67170059 -73146706 + AluSq SINE Alu 1 310 -3 260 202 32 128 chr10 67170059 67170124 -73146641 + MIR SINE MIR 153 208 -54 466 232 120 77 chr10 67170853 67171112 -73145653 + MER51A LTR ERV1 328 597 -37 * 620 137 0 57 chr10 67171111 67171235 -73145530 + MER51C LTR ERV1 522 638 -2 1785 157 11 0 chr10 67171265 67171575 -73145190 - AluJo SINE Alu 0 313 1 197 32 0 32 chr10 67172169 67172200 -73144565 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 317 217 58 42 chr10 67172202 67172322 -73144443 + L1MA4 LINE L1 6127 6248 -52 192 245 41 0 chr10 67172360 67172409 -73144356 - L2 LINE L2 -203 3069 3019 245 277 61 68 chr10 67172749 67172897 -73143868 - L1ME LINE L1 -399 5722 5576 272 304 35 92 chr10 67172919 67173179 -73143586 + MIR SINE MIR 18 262 0 283 321 55 18 chr10 67173347 67173456 -73143309 - MIR3 SINE MIR -93 115 3 666 244 56 88 chr10 67173464 67173714 -73143051 + MIR SINE MIR 2 243 -19 2117 111 7 20 chr10 67174085 67174403 -73142362 + AluSx SINE Alu 1 312 0 1940 162 0 3 chr10 67175365 67175661 -73141104 + AluJo SINE Alu 1 295 -17 272 140 0 18 chr10 67176238 67176295 -73140470 + (TTCTC)n Simple_repeat Simple_repeat 1 56 0 1277 184 137 26 chr10 67176295 67176566 -73140199 - AluJo SINE Alu 0 302 2 504 228 121 11 chr10 67176569 67176752 -73140013 + MLT1J LTR MaLR 8 172 -278 934 216 18 40 chr10 67176952 67177174 -73139591 - AluJo SINE Alu -14 298 82 673 346 107 28 chr10 67177347 67178082 -73138683 - L2 LINE L2 0 3272 2470 314 262 48 39 chr10 67178272 67178375 -73138390 + L2 LINE L2 3142 3245 -27 343 318 32 19 chr10 67179412 67179566 -73137199 - MIR SINE MIR -55 207 52 1039 322 64 8 chr10 67179648 67180036 -73136729 - MLT1K LTR MaLR -110 478 69 645 306 70 0 chr10 67180090 67180289 -73136476 + LTR33 LTR ERVL 1 213 -308 410 258 68 23 chr10 67180409 67180541 -73136224 + LTR33 LTR ERVL 384 521 0 692 281 158 38 chr10 67180573 67180915 -73135850 + L3 LINE CR1 1169 1551 -26 999 150 58 19 chr10 67181108 67181315 -73135450 - L1M1 LINE L1 -7332 233 19 550 185 126 143 chr10 67181315 67181743 -73135022 - Charlie7 DNA MER1_type -763 1849 1429 7501 40 18 9 chr10 67181795 67182687 -73134078 + L1PA7 LINE L1 5254 6153 -1 28 0 0 0 chr10 67182687 67182715 -73134050 + AT_rich Low_complexity Low_complexity 1 28 0 394 259 54 0 chr10 67183135 67183247 -73133518 - LTR33 LTR ERVL -57 464 347 241 217 155 62 chr10 67183362 67183491 -73133274 - LTR33 LTR ERVL -362 159 19 2679 36 3 0 chr10 67183539 67183845 -73132920 - AluY SINE Alu -4 307 1 1466 200 154 6 chr10 67184474 67184819 -73131946 + MSTD LTR MaLR 1 396 0 461 139 0 0 chr10 67185515 67185587 -73131178 - MIR SINE MIR -118 144 73 1206 116 22 0 chr10 67185593 67185774 -73130991 - MER53 DNA DNA 0 189 5 311 305 95 50 chr10 67185912 67186112 -73130653 - MIR SINE MIR -40 222 14 1381 155 5 5 chr10 67186290 67186503 -73130262 - AluJb SINE Alu -99 213 1 330 148 0 0 chr10 67187862 67187916 -73128849 - MIR SINE MIR -5 257 204 255 292 156 0 chr10 67188223 67188319 -73128446 - MIR SINE MIR -132 130 20 2744 102 3 0 chr10 67188351 67188724 -73128041 - THE1C LTR MaLR 0 375 2 2225 113 0 3 chr10 67189478 67189780 -73126985 - AluSx SINE Alu -11 301 1 450 242 56 19 chr10 67189858 67190019 -73126746 + HAL1b LINE L1 1193 6121 0 3388 127 24 4 chr10 67190354 67190865 -73125900 - MER1A DNA MER1_type -6 523 3 2844 61 2 23 chr10 67190916 67191311 -73125454 + L1PA5 LINE L1 5768 6154 0 555 160 19 0 chr10 67191316 67191422 -73125343 + AluSg/x SINE Alu 203 310 0 1262 186 0 62 chr10 67191568 67191847 -73124918 - AluJb SINE Alu 0 303 41 271 238 41 82 chr10 67192081 67192228 -73124537 + MLT1K LTR MaLR 300 440 -148 1377 127 33 0 chr10 67192533 67192768 -73123997 - AluSg/x SINE Alu 0 306 65 192 77 0 0 chr10 67192917 67192943 -73123822 + (GGA)n Simple_repeat Simple_repeat 2 27 0 283 293 0 24 chr10 67193046 67193128 -73123637 + Charlie8 DNA MER1_type 7 86 -2331 255 213 0 0 chr10 67193177 67193224 -73123541 - MIR SINE MIR -37 225 179 701 294 108 0 chr10 67193229 67193433 -73123332 - MIR SINE MIR -10 252 27 4287 167 35 26 chr10 67193787 67193883 -73122882 + L1MB4 LINE L1 5110 5204 -976 683 215 0 146 chr10 67193883 67194088 -73122677 + FAM SINE Alu 1 175 0 4287 167 35 26 chr10 67194088 67194170 -73122595 + L1MB4 LINE L1 5204 5284 -896 2409 80 0 3 chr10 67194170 67194471 -73122294 + AluY SINE Alu 1 300 -11 4287 167 35 26 chr10 67194471 67195354 -73121411 + L1MB4 LINE L1 5284 6174 -6 530 263 59 13 chr10 67196270 67196422 -73120343 + MIR3 SINE MIR 42 200 -8 217 221 59 44 chr10 67197597 67197665 -73119100 - L2 LINE L2 0 3313 3245 1652 163 7 35 chr10 67197705 67197994 -73118771 + AluJo SINE Alu 21 301 -11 387 0 0 0 chr10 67199888 67199931 -73116834 + (CA)n Simple_repeat Simple_repeat 2 44 0 2399 70 0 0 chr10 67200682 67200981 -73115784 + AluSc SINE Alu 1 299 -10 21 57 0 0 chr10 67202325 67202360 -73114405 + AT_rich Low_complexity Low_complexity 1 35 0 1864 157 22 22 chr10 67203455 67203767 -73112998 + AluJo SINE Alu 1 312 0 318 26 0 0 chr10 67204166 67204205 -73112560 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 67204679 67204700 -73112065 + AT_rich Low_complexity Low_complexity 1 21 0 1708 178 3 14 chr10 67205227 67205362 -73111403 + AluJb SINE Alu 1 136 -176 2297 112 3 0 chr10 67205362 67205667 -73111098 + AluSp SINE Alu 2 307 -6 1708 178 3 14 chr10 67205667 67205824 -73110941 + AluJb SINE Alu 136 290 -22 309 238 0 0 chr10 67205824 67205904 -73110861 + (TA)n Simple_repeat Simple_repeat 1 80 0 2371 57 7 10 chr10 67206269 67206566 -73110199 - AluY SINE Alu -15 296 1 29 0 0 0 chr10 67207269 67207298 -73109467 + AT_rich Low_complexity Low_complexity 1 29 0 413 226 90 13 chr10 67207421 67207576 -73109189 + L1ME4a LINE L1 5944 6110 -11 2244 122 0 0 chr10 67207585 67207888 -73108877 + AluSx SINE Alu 1 303 -9 254 329 71 7 chr10 67208000 67208140 -73108625 - L2 LINE L2 -567 2747 2599 201 333 13 47 chr10 67208593 67208743 -73108022 - L2 LINE L2 -725 2589 2445 2419 94 7 0 chr10 67208748 67209057 -73107708 - AluSx SINE Alu -1 311 1 298 241 0 0 chr10 67209098 67209156 -73107609 + L2 LINE L2 3215 3272 0 197 232 87 29 chr10 67209537 67209606 -73107159 - L3 LINE CR1 -3 1574 1502 424 149 27 0 chr10 67309979 67310053 -73006712 - AluS SINE Alu -235 77 2 487 217 38 0 chr10 67310060 67310166 -73006599 - MIR SINE MIR -77 185 76 2050 118 0 4 chr10 67310286 67310558 -73006207 + AluSx SINE Alu 26 296 -16 344 310 41 14 chr10 67310739 67310884 -73005881 + MER5B DNA MER1_type 1 149 -29 2367 92 3 10 chr10 67311204 67311518 -73005247 - AluSx SINE Alu 0 312 1 2139 144 13 0 chr10 67311548 67311854 -73004911 - AluJo SINE Alu -2 310 1 461 311 0 8 chr10 67311935 67312057 -73004708 + MER91A DNA MER1_type 2 122 -74 30 59 0 0 chr10 67312271 67312322 -73004443 + AT_rich Low_complexity Low_complexity 1 51 0 2005 134 3 33 chr10 67313472 67313779 -73002986 - AluSx SINE Alu -13 299 2 465 303 55 36 chr10 67315166 67315331 -73001434 + MER91A DNA MER1_type 1 168 -28 2114 137 3 3 chr10 67316871 67317170 -72999595 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 67318637 67318659 -72998106 + GC_rich Low_complexity Low_complexity 1 22 0 419 242 94 11 chr10 67319137 67319440 -72997325 - MER110A LTR ERV1 -1 467 132 581 170 179 0 chr10 67320745 67320857 -72995908 - FLAM_C SINE Alu -1 132 1 2690 40 0 0 chr10 67320860 67321159 -72995606 - AluY SINE Alu -12 299 1 375 313 141 16 chr10 67321196 67321388 -72995377 - MIR SINE MIR -46 216 1 210 222 56 0 chr10 67321971 67322016 -72994749 + MIR SINE MIR 66 116 -146 1837 127 8 0 chr10 67322016 67322276 -72994489 - AluSq SINE Alu -8 305 44 276 258 61 0 chr10 67322323 67322389 -72994376 - L2 LINE L2 0 3313 3244 2291 92 10 0 chr10 67323194 67323487 -72993278 + AluSx SINE Alu 2 297 -15 1862 173 17 10 chr10 67324371 67324672 -72992093 + AluJb SINE Alu 2 304 -8 470 314 0 28 chr10 67324751 67324949 -72991816 - MIR SINE MIR -56 206 18 782 270 86 9 chr10 67325310 67325543 -72991222 - MIR SINE MIR 0 262 12 1382 171 4 21 chr10 67325774 67326008 -72990757 - AluJo SINE Alu -22 290 61 1979 137 10 26 chr10 67326490 67326796 -72989969 + AluSx SINE Alu 1 301 -11 2748 136 50 132 chr10 67327467 67328034 -72988731 + L1MB2 LINE L1 5461 6023 -148 375 125 0 11 chr10 67328034 67328102 -72988663 + Alu SINE Alu 1 51 -251 2748 136 50 132 chr10 67328102 67328234 -72988531 + L1MB2 LINE L1 6023 6164 -7 1826 157 4 11 chr10 67328355 67328636 -72988129 - AluSx SINE Alu -33 279 1 2254 115 7 0 chr10 67328649 67328944 -72987821 - AluSx SINE Alu -11 301 5 2237 102 10 3 chr10 67329579 67329882 -72986883 + AluSq SINE Alu 1 305 -8 234 363 30 15 chr10 67330064 67330199 -72986566 + MIR3 SINE MIR 7 143 -65 342 95 0 32 chr10 67331103 67331166 -72985599 + L1M3 LINE L1 5442 5502 -669 387 160 152 7 chr10 67331167 67331204 -72985561 + FRAM SINE Alu 67 97 -205 1897 147 3 17 chr10 67331204 67331504 -72985261 - AluSx SINE Alu -16 296 1 387 160 152 7 chr10 67331504 67331574 -72985191 + FRAM SINE Alu 97 143 -23 40 0 0 0 chr10 67331574 67331614 -72985151 + AT_rich Low_complexity Low_complexity 1 40 0 1889 162 28 0 chr10 67331632 67331916 -72984849 + AluJb SINE Alu 4 295 -17 27 0 0 0 chr10 67331941 67331968 -72984797 + AT_rich Low_complexity Low_complexity 1 27 0 2072 122 3 11 chr10 67331978 67332295 -72984470 + AluSx SINE Alu 1 315 0 2553 81 0 0 chr10 67332532 67332841 -72983924 + AluY SINE Alu 1 309 -2 410 270 73 15 chr10 67332963 67333100 -72983665 - L1MC4 LINE L1 -138 7904 7760 429 338 54 22 chr10 67333495 67333717 -72983048 + MIR SINE MIR 34 262 0 335 299 175 0 chr10 67333856 67334010 -72982755 + MIR SINE MIR 32 212 -50 700 171 17 0 chr10 67334126 67334243 -72982522 + FLAM_A SINE Alu 1 119 -14 524 276 15 0 chr10 67334797 67334931 -72981834 - L2 LINE L2 0 3272 3137 250 289 62 41 chr10 67335374 67335471 -72981294 - L2 LINE L2 -263 3050 2952 1645 157 45 51 chr10 67335703 67336015 -72980750 - AluJb SINE Alu -1 311 2 402 325 138 0 chr10 67336146 67336306 -72980459 - MER102b DNA MER1_type 0 341 160 1054 194 16 121 chr10 67336332 67336623 -72980142 + LTR16C LTR ERVL 110 430 -61 2086 142 0 0 chr10 67336623 67336918 -72979847 - AluSx SINE Alu -17 295 1 1921 136 63 3 chr10 67336918 67337205 -72979560 - AluJo SINE Alu -8 304 1 1054 194 16 121 chr10 67337205 67337293 -72979472 + LTR16C LTR ERVL 428 450 -41 370 145 14 14 chr10 67337294 67337363 -72979402 + LTR16C LTR ERVL 420 488 -3 1622 184 36 16 chr10 67337395 67337700 -72979065 - AluJo SINE Alu -1 311 1 1949 132 54 14 chr10 67337901 67338197 -72978568 + AluSx SINE Alu 1 308 -4 1948 125 0 21 chr10 67338208 67338487 -72978278 + AluSx SINE Alu 1 273 -39 797 147 0 7 chr10 67338497 67338640 -72978125 + (GGGAA)n Simple_repeat Simple_repeat 4 145 0 204 40 0 0 chr10 67338643 67338668 -72978097 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 477 313 18 40 chr10 67339667 67339891 -72976874 - MIR SINE MIR 0 262 44 374 321 18 0 chr10 67341444 67341556 -72975209 + L2 LINE L2 3136 3249 -23 476 133 44 11 chr10 67342224 67342314 -72974451 + MIR SINE MIR 106 198 -64 2405 79 0 7 chr10 67342386 67342690 -72974075 + AluY SINE Alu 1 302 -9 1737 148 25 6 chr10 67342692 67343016 -72973749 + L1MB4 LINE L1 5821 6150 -30 917 161 0 32 chr10 67343016 67343171 -72973594 + AluJo SINE Alu 1 150 -162 221 0 0 33 chr10 67343216 67343246 -72973519 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 329 254 74 8 chr10 67343586 67343708 -72973057 - L1ME4a LINE L1 -56 6065 5936 228 220 34 0 chr10 67343730 67343789 -72972976 - L1ME1 LINE L1 -3 6163 6103 1217 96 0 0 chr10 67343831 67343988 -72972777 + AluSp/q SINE Alu 157 313 0 229 257 14 71 chr10 67344193 67344263 -72972502 + MLT1K LTR MaLR 108 173 -415 389 276 154 0 chr10 67344407 67344563 -72972202 + MLT1K LTR MaLR 409 588 0 1921 137 3 7 chr10 67344618 67344911 -72971854 + AluSx SINE Alu 1 292 -20 2259 103 7 0 chr10 67344921 67345212 -72971553 + AluSx SINE Alu 3 295 -17 1955 122 14 27 chr10 67345426 67345721 -72971044 + AluJo SINE Alu 11 301 -11 389 206 22 22 chr10 67346310 67346402 -72970363 - MLT1J LTR MaLR -419 92 1 1880 201 70 98 chr10 67346527 67346591 -72970174 - MLT1E3 LTR MaLR 0 624 560 2383 67 0 0 chr10 67346591 67346910 -72969855 - AluY SINE Alu 0 319 1 1880 201 70 98 chr10 67346910 67346922 -72969843 - MLT1E3 LTR MaLR -64 560 549 2485 70 0 0 chr10 67346922 67347207 -72969558 - AluSc SINE Alu -24 285 1 1880 201 70 98 chr10 67347207 67347770 -72968995 - MLT1E3 LTR MaLR -75 549 1 367 237 11 0 chr10 67348331 67348424 -72968341 + L1MC5 LINE L1 7321 7414 -547 1845 148 0 7 chr10 67348496 67348773 -72967992 + AluJb SINE Alu 36 310 -2 31 0 0 0 chr10 67348773 67348804 -72967961 + AT_rich Low_complexity Low_complexity 1 31 0 2259 112 0 0 chr10 67348825 67349120 -72967645 - AluSx SINE Alu -17 295 1 2545 56 0 3 chr10 67349319 67349624 -72967141 - AluY SINE Alu -7 304 1 467 271 72 28 chr10 67349661 67349912 -72966853 + L1MC4a LINE L1 5574 5835 -1973 581 312 45 18 chr10 67351023 67351244 -72965521 + MIR SINE MIR 24 250 -12 202 276 13 40 chr10 67352705 67352781 -72963984 - MER5A DNA MER1_type 0 189 116 979 110 0 21 chr10 67352798 67352943 -72963822 - FRAM SINE Alu -4 172 31 2118 114 0 0 chr10 67352949 67353257 -72963508 - AluSc SINE Alu 0 308 1 266 254 0 30 chr10 67353257 67353324 -72963441 + MER5B DNA MER1_type 114 178 0 861 133 7 22 chr10 67353873 67354008 -72962757 - FLAM_C SINE Alu -10 133 1 196 105 53 0 chr10 67354049 67354087 -72962678 + L2 LINE L2 3269 3308 -5 279 310 60 9 chr10 67354255 67354371 -72962394 - MARNA DNA Mariner -9 577 456 1089 136 0 0 chr10 67354677 67354824 -72961941 - AluSp SINE Alu -20 293 147 1815 157 17 13 chr10 67355319 67355618 -72961147 - AluJo SINE Alu -12 300 1 334 193 121 12 chr10 67355754 67355837 -72960928 + L1ME4a LINE L1 6029 6120 -1 472 264 78 43 chr10 67355894 67356077 -72960688 - MIR SINE MIR -62 146 4 2106 126 0 10 chr10 67356293 67356602 -72960163 - AluSx SINE Alu -3 309 4 2436 89 0 3 chr10 67356852 67357156 -72959609 - AluSx SINE Alu -9 303 1 1192 165 104 32 chr10 67357237 67357474 -72959291 + MER2 DNA MER2_type 1 268 -77 2289 122 0 0 chr10 67357474 67357786 -72958979 - AluSx SINE Alu 0 312 1 1192 165 104 32 chr10 67357786 67357864 -72958901 + MER2 DNA MER2_type 268 339 -6 1909 140 74 0 chr10 67358160 67358496 -72958269 + MER46B DNA MER2_type 1 236 0 1788 152 12 53 chr10 67358557 67358879 -72957886 - AluJb SINE Alu -3 309 1 2297 110 0 0 chr10 67359106 67359396 -72957369 - AluSx SINE Alu -22 290 1 2341 105 0 3 chr10 67359400 67359704 -72957061 - AluSq SINE Alu -10 303 1 23 33 0 0 chr10 67359737 67359767 -72956998 + AT_rich Low_complexity Low_complexity 1 30 0 2569 65 0 3 chr10 67360850 67361159 -72955606 - AluY SINE Alu -3 308 1 2025 128 35 0 chr10 67361220 67361508 -72955257 - AluSx SINE Alu -14 298 1 2192 123 3 13 chr10 67361511 67361821 -72954944 - AluSx SINE Alu 0 312 6 2270 105 20 3 chr10 67362488 67362793 -72953972 + AluSq SINE Alu 1 310 -3 460 309 100 54 chr10 67364392 67364741 -72952024 + L2 LINE L2 2949 3313 0 543 284 84 40 chr10 67365188 67365438 -72951327 + MIR SINE MIR 2 262 0 25 0 0 0 chr10 67365687 67365712 -72951053 + AT_rich Low_complexity Low_complexity 1 25 0 2025 162 0 9 chr10 67365821 67366136 -72950629 - AluJb SINE Alu 0 312 1 186 43 0 0 chr10 67366152 67366175 -72950590 + (A)n Simple_repeat Simple_repeat 1 23 0 1861 148 32 4 chr10 67366310 67366587 -72950178 - AluJb SINE Alu -26 286 2 2090 92 46 3 chr10 67366872 67367154 -72949611 + AluSx SINE Alu 1 294 -18 3230 111 9 47 chr10 67367301 67367507 -72949258 - MER4B LTR ERV1 -72 538 326 2135 113 24 3 chr10 67367507 67367800 -72948965 + AluSq SINE Alu 1 299 -14 3230 111 9 47 chr10 67367800 67368152 -72948613 - MER4B LTR ERV1 -284 326 1 204 254 32 0 chr10 67368152 67368215 -72948550 + (CATA)n Simple_repeat Simple_repeat 4 68 0 833 234 67 35 chr10 67369370 67369431 -72947334 + MER46C DNA MER2_type 11 69 -269 2163 138 0 0 chr10 67369431 67369727 -72947038 + AluSx SINE Alu 1 296 -16 833 234 67 35 chr10 67369727 67369977 -72946788 + MER46C DNA MER2_type 69 332 -6 1956 143 16 32 chr10 67371148 67371462 -72945303 + AluJo SINE Alu 3 311 -1 554 133 178 37 chr10 67371567 67371702 -72945063 - MER20 DNA MER1_type -65 154 1 193 152 0 0 chr10 67371831 67371864 -72944901 + MIR SINE MIR 102 134 -128 2177 128 0 3 chr10 67371899 67372212 -72944553 + AluSx SINE Alu 1 312 0 222 288 59 17 chr10 67372226 67372344 -72944421 + MIR SINE MIR 138 260 -2 * 630 259 106 70 chr10 67372326 67372833 -72943932 + L2 LINE L2 2704 3232 -40 2158 139 3 0 chr10 67373102 67373411 -72943354 - AluSx SINE Alu -2 310 1 1570 96 5 14 chr10 67373786 67373995 -72942770 - AluSg/x SINE Alu -18 292 86 2070 119 3 11 chr10 67374716 67375002 -72941763 - AluSx SINE Alu -14 298 15 2690 175 48 57 chr10 67375010 67375958 -72940807 + LTR13 LTR ERVK 16 1007 0 1432 159 26 17 chr10 67375987 67376289 -72940476 - L1MA6 LINE L1 -1 6299 5995 1992 172 174 18 chr10 67376351 67376461 -72940304 + MLT1D LTR MaLR 1 93 -412 2078 110 38 10 chr10 67376461 67376751 -72940014 - AluSx SINE Alu -14 298 1 1992 172 174 18 chr10 67376751 67377077 -72939688 + MLT1D LTR MaLR 93 505 0 1194 150 0 0 chr10 67377300 67377473 -72939292 - AluSg/x SINE Alu -3 307 135 1335 170 106 35 chr10 67377488 67377770 -72938995 - AluJb SINE Alu 0 302 1 634 244 52 35 chr10 67377778 67377950 -72938815 + MER5B DNA MER1_type 4 178 0 514 275 35 7 chr10 67377972 67378114 -72938651 - MER5A DNA MER1_type -9 180 35 338 246 14 17 chr10 67378206 67378355 -72938410 + MER5B DNA MER1_type 1 186 -3 959 195 12 6 chr10 67378366 67378535 -72938230 - MER5A DNA MER1_type -1 188 19 2225 105 3 7 chr10 67378560 67378854 -72937911 + AluSx SINE Alu 1 293 -19 2465 86 0 0 chr10 67379249 67379551 -72937214 + AluSg SINE Alu 1 302 -8 195 42 0 0 chr10 67379568 67379592 -72937173 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 726 188 0 0 chr10 67379592 67379709 -72937056 - FLAM_A SINE Alu -16 117 1 425 297 170 37 chr10 67380486 67381187 -72935578 + L2 LINE L2 2465 3272 0 1961 154 0 33 chr10 67381274 67381580 -72935185 + AluJb SINE Alu 1 296 -16 414 109 0 0 chr10 67381611 67381675 -72935090 - AluSp/q SINE Alu -12 301 238 985 318 57 18 chr10 67381716 67382206 -72934559 - L2 LINE L2 -737 2577 2069 287 316 107 60 chr10 67382639 67382873 -72933892 + L2 LINE L2 2838 3082 -190 2343 107 0 7 chr10 67383006 67383314 -72933451 + AluSg1 SINE Alu 1 306 -3 819 164 0 8 chr10 67383383 67383517 -72933248 - FLAM_C SINE Alu 0 133 1 1821 143 14 59 chr10 67383562 67383872 -72932893 + L1MB8 LINE L1 5829 6122 -56 778 214 0 0 chr10 67383872 67384003 -72932762 + FLAM_A SINE Alu 1 131 -2 1821 143 14 59 chr10 67384003 67384049 -72932716 + L1MB8 LINE L1 6122 6169 -9 1052 157 6 6 chr10 67384051 67384210 -72932555 - FRAM SINE Alu -7 159 1 2379 81 3 0 chr10 67384621 67384916 -72931849 + AluSg SINE Alu 1 296 -14 2421 82 3 0 chr10 67384921 67385215 -72931550 + AluSc SINE Alu 1 295 -14 814 236 21 5 chr10 67385337 67385528 -72931237 + MIR SINE MIR 28 221 -41 2176 120 0 10 chr10 67385530 67385830 -72930935 + AluSx SINE Alu 1 297 -15 2367 77 0 10 chr10 67385830 67386127 -72930638 + AluSg SINE Alu 1 294 -16 28 86 0 0 chr10 67386407 67386477 -72930288 + GC_rich Low_complexity Low_complexity 1 70 0 243 339 9 43 chr10 67387688 67387803 -72928962 + L3 LINE CR1 297 407 -1170 243 305 84 0 chr10 67390528 67390623 -72926142 + L2 LINE L2 3208 3310 -3 686 284 6 16 chr10 67390919 67391102 -72925663 - MER5A DNA MER1_type -1 188 8 232 239 0 0 chr10 67392632 67392678 -72924087 + CT-rich Low_complexity Low_complexity 1 46 0 218 286 231 0 chr10 67395179 67395270 -72921495 - MIR SINE MIR -29 233 122 2471 77 0 6 chr10 67395273 67395586 -72921179 + AluY SINE Alu 1 311 0 974 223 99 75 chr10 67395590 67395906 -72920859 + L2 LINE L2 2961 3287 -26 1325 109 226 32 chr10 67395906 67396154 -72920611 - AluSg SINE Alu -4 296 1 974 223 99 75 chr10 67396154 67396182 -72920583 + L2 LINE L2 3287 3313 0 196 328 15 30 chr10 67396214 67396281 -72920484 - MIR SINE MIR -189 73 8 630 223 7 29 chr10 67397188 67397327 -72919438 + MIR SINE MIR 47 182 -80 490 327 150 0 chr10 67397521 67397741 -72919024 + MIR SINE MIR 6 258 -4 2059 118 4 7 chr10 67398553 67398832 -72917933 - AluSx SINE Alu -32 280 3 261 188 101 0 chr10 67400570 67400639 -72916126 - MIR SINE MIR 0 262 187 * 410 259 71 18 chr10 67400630 67400742 -72916023 - L2 LINE L2 -2 3311 3194 * 494 293 60 12 chr10 67400736 67400903 -72915862 - MIR SINE MIR -75 187 13 214 127 0 73 chr10 67402298 67402353 -72914412 + (CACCC)n Simple_repeat Simple_repeat 2 52 0 724 180 8 0 chr10 67402728 67402856 -72913909 - FLAM_A SINE Alu -1 132 4 700 248 66 35 chr10 67402886 67403112 -72913653 - MIR SINE MIR -2 260 28 363 231 46 37 chr10 67404131 67404239 -72912526 - MIR SINE MIR -127 135 27 392 226 288 34 chr10 67404256 67404402 -72912363 + MER5A DNA MER1_type 7 189 0 1235 109 8 96 chr10 67404657 67404896 -72911869 - L1MC1 LINE L1 0 6333 6116 494 237 125 79 chr10 67405970 67406249 -72910516 - MER102b DNA MER1_type -1 340 49 818 169 101 0 chr10 67407829 67407977 -72908788 - FRAM SINE Alu -12 164 2 301 193 92 82 chr10 67407980 67408109 -72908656 - MIR SINE MIR -91 117 17 2527 71 0 0 chr10 67408148 67408443 -72908322 - AluSx SINE Alu -17 295 1 291 290 32 11 chr10 67408470 67408563 -72908202 - MIR SINE MIR 0 262 168 208 217 0 0 chr10 67408568 67408614 -72908151 + (ATG)n Simple_repeat Simple_repeat 3 48 0 488 201 149 22 chr10 67408622 67408756 -72908009 - MIR SINE MIR 0 262 112 25 0 0 0 chr10 67409453 67409478 -72907287 + GC_rich Low_complexity Low_complexity 1 25 0 256 209 23 70 chr10 67409727 67409856 -72906909 + G-rich Low_complexity Low_complexity 2 124 0 246 99 14 42 chr10 67410129 67410200 -72906565 + (CCCCG)n Simple_repeat Simple_repeat 1 69 0 30 69 0 0 chr10 67410213 67410271 -72906494 + GC_rich Low_complexity Low_complexity 1 58 0 287 274 69 39 chr10 67410923 67411025 -72905740 + MIR SINE MIR 5 109 -153 1554 81 0 10 chr10 67411025 67411223 -72905542 - AluSg/x SINE Alu -22 290 95 353 225 135 0 chr10 67411311 67411400 -72905365 + MIR SINE MIR 141 241 -21 1195 66 0 0 chr10 67411410 67411546 -72905219 + AluSg SINE Alu 1 136 -174 283 289 237 0 chr10 67411548 67411645 -72905120 + L2 LINE L2 3146 3265 -7 1297 184 132 23 chr10 67412841 67413107 -72903658 - AluJb SINE Alu -7 295 1 309 214 36 48 chr10 67413669 67413753 -72903012 + L3 LINE CR1 1490 1572 -5 1733 153 10 17 chr10 67413891 67414179 -72902586 - AluJo SINE Alu -17 295 10 1904 168 10 13 chr10 67414380 67414690 -72902075 - AluJo SINE Alu -3 309 1 464 198 74 8 chr10 67415041 67415162 -72901603 + L2 LINE L2 3184 3312 -1 498 298 78 37 chr10 67415443 67415634 -72901131 - MIR SINE MIR -5 257 59 189 107 0 0 chr10 67415809 67415837 -72900928 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 229 327 69 83 chr10 67415853 67416202 -72900563 - L2 LINE L2 -49 3264 2921 1013 117 0 0 chr10 67416212 67416349 -72900416 + AluJb SINE Alu 163 299 -13 231 268 61 0 chr10 67416354 67416436 -72900329 - L2 LINE L2 -360 2912 2826 497 312 124 57 chr10 67416933 67417247 -72899518 + L2 LINE L2 2924 3258 -14 2344 109 0 6 chr10 67417571 67417883 -72898882 + AluSx SINE Alu 1 310 -2 424 196 42 173 chr10 67418067 67418091 -72898674 + MIR SINE MIR 76 102 -160 2051 137 3 13 chr10 67418091 67418397 -72898368 - AluJb SINE Alu -9 303 1 424 196 42 173 chr10 67418397 67418492 -72898273 + MIR SINE MIR 102 208 -54 1203 107 38 84 chr10 67418492 67418701 -72898064 - L1MA8 LINE L1 -2 6289 6093 1493 159 144 0 chr10 67418701 67418835 -72897930 - AluSx SINE Alu -18 294 181 414 0 0 0 chr10 67418835 67418881 -72897884 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1493 159 144 0 chr10 67418881 67419003 -72897762 - AluSx SINE Alu -131 181 1 1203 107 38 84 chr10 67419003 67419056 -72897709 - L1MA8 LINE L1 -198 6093 6039 424 196 42 173 chr10 67419056 67419149 -72897616 + MIR SINE MIR 208 261 -1 197 183 0 133 chr10 67419216 67419276 -72897489 + L2 LINE L2 2430 2481 -833 498 263 88 39 chr10 67419291 67419496 -72897269 + MIR SINE MIR 48 262 0 239 197 45 45 chr10 67419615 67419681 -72897084 - AluS SINE Alu -237 66 1 2252 117 3 7 chr10 67420136 67420445 -72896320 - AluSx SINE Alu -4 308 1 700 247 22 69 chr10 67420446 67420601 -72896164 + MIR SINE MIR 43 185 -77 1513 205 3 10 chr10 67420601 67420894 -72895871 - AluJo SINE Alu -21 291 1 700 247 22 69 chr10 67420894 67420969 -72895796 + MIR SINE MIR 185 262 0 2261 105 10 0 chr10 67420988 67421292 -72895473 - AluSp SINE Alu -6 307 1 2220 115 0 10 chr10 67421292 67421597 -72895168 - AluSx SINE Alu -10 302 1 2019 109 71 3 chr10 67422546 67422829 -72893936 + AluSx SINE Alu 1 302 -10 1846 125 37 40 chr10 67423237 67423534 -72893231 + AluSx SINE Alu 1 296 -16 432 221 80 0 chr10 67423546 67423659 -72893106 - MIR3 SINE MIR -29 179 58 399 275 89 25 chr10 67424515 67424692 -72892073 + MIR SINE MIR 33 218 -44 2502 92 0 3 chr10 67424831 67425145 -72891620 + AluSq SINE Alu 1 313 0 1496 172 8 89 chr10 67425271 67425654 -72891111 + MLT1A2 LTR MaLR 5 356 -18 4588 187 136 28 chr10 67426207 67426364 -72890401 + L1MC4 LINE L1 6438 6577 -1465 369 0 0 0 chr10 67426364 67426405 -72890360 + (TG)n Simple_repeat Simple_repeat 1 41 0 4588 187 136 28 chr10 67426405 67427253 -72889512 + L1MC4 LINE L1 6577 7332 -710 2347 92 3 0 chr10 67427253 67427545 -72889220 + AluSq SINE Alu 1 293 -20 2415 87 3 0 chr10 67427546 67427856 -72888909 + AluY SINE Alu 1 311 0 4588 187 136 28 chr10 67427856 67428220 -72888545 + L1MC4 LINE L1 7331 8042 0 854 238 98 107 chr10 67428333 67428660 -72888105 - MLT1H1 LTR MaLR -2 553 230 2102 106 3 14 chr10 67428660 67428953 -72887812 - AluSg SINE Alu -19 291 2 854 238 98 107 chr10 67428953 67429083 -72887682 - MLT1H1 LTR MaLR -325 230 100 2705 145 9 74 chr10 67429687 67429810 -72886955 - L1MB8 LINE L1 -2 6176 6046 1949 152 0 3 chr10 67429810 67430100 -72886665 - AluJb SINE Alu -13 299 11 2705 145 9 74 chr10 67430100 67430493 -72886272 - L1MB8 LINE L1 -132 6046 5699 2199 118 3 0 chr10 67430493 67430789 -72885976 - AluSg SINE Alu -13 297 1 2705 145 9 74 chr10 67430789 67430849 -72885916 - L1MB8 LINE L1 -479 5699 5637 2357 97 3 0 chr10 67430861 67431161 -72885604 - AluSp SINE Alu -12 301 1 728 216 89 51 chr10 67431314 67431365 -72885400 + MIR SINE MIR 18 66 -196 1986 86 4 0 chr10 67431365 67431636 -72885129 + AluSg SINE Alu 36 307 0 728 216 89 51 chr10 67431636 67431819 -72884946 + MIR SINE MIR 66 262 0 954 181 13 0 chr10 67431820 67431975 -72884790 + FRAM SINE Alu 1 157 -9 21 0 0 0 chr10 67432036 67432057 -72884708 + AT_rich Low_complexity Low_complexity 1 21 0 3249 165 21 25 chr10 67432972 67433335 -72883430 - L1MB8 LINE L1 -5 6173 5813 2303 100 21 0 chr10 67433335 67433626 -72883139 + AluSg SINE Alu 1 297 -13 3249 165 21 25 chr10 67433626 67433892 -72882873 - L1MB8 LINE L1 -365 5813 5547 397 282 151 63 chr10 67434106 67434132 -72882633 - L1M4 LINE L1 -1704 4442 4420 1901 167 3 16 chr10 67434132 67434438 -72882327 + AluJo SINE Alu 1 302 -10 397 282 151 63 chr10 67434438 67434794 -72881971 - L1M4 LINE L1 -1726 4420 4026 1127 105 7 20 chr10 67434889 67435042 -72881723 + AluSx SINE Alu 1 151 -161 2284 138 0 0 chr10 67435048 67435360 -72881405 + AluSx SINE Alu 1 312 0 2355 110 0 0 chr10 67435385 67435694 -72881071 + AluSg1 SINE Alu 1 309 0 1205 143 6 0 chr10 67435694 67435862 -72880903 + AluSx SINE Alu 130 298 -12 234 228 0 0 chr10 67435862 67435919 -72880846 - MLT1L LTR MaLR -14 601 545 785 307 23 28 chr10 67436096 67436448 -72880317 + L1MEc LINE L1 413 762 -5801 331 182 0 182 chr10 67436448 67436492 -72880273 - MLT2B2 LTR ERVL 0 515 465 482 0 17 0 chr10 67436492 67436550 -72880215 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 331 182 0 182 chr10 67436550 67436637 -72880128 - MLT2B2 LTR ERVL -50 465 408 233 239 0 45 chr10 67436638 67436710 -72880055 + L1MEc LINE L1 1518 1587 -4797 2153 154 6 14 chr10 67436710 67437061 -72879704 - MER7A DNA MER2_type 0 346 1 233 239 0 45 chr10 67437061 67437076 -72879689 + L1MEc LINE L1 1587 1601 -4783 368 298 117 0 chr10 67437172 67437343 -72879422 + L1MEc LINE L1 1794 1984 -4579 840 203 0 6 chr10 67437748 67437906 -72878859 + AluJb SINE Alu 39 195 -117 871 301 51 39 chr10 67438006 67438438 -72878327 + MLT1K LTR MaLR 152 588 0 837 183 0 0 chr10 67438487 67438618 -72878147 + FLAM_A SINE Alu 2 132 -1 34 0 0 0 chr10 67438648 67438682 -72878083 + AT_rich Low_complexity Low_complexity 1 34 0 348 237 137 7 chr10 67439063 67439202 -72877563 - MIR SINE MIR -58 204 48 23 68 0 0 chr10 67439267 67439311 -72877454 + AT_rich Low_complexity Low_complexity 1 44 0 413 208 20 20 chr10 67440204 67440305 -72876460 + LTR16B LTR ERVL 364 464 0 333 295 88 14 chr10 67440852 67441046 -72875719 - MIR SINE MIR -59 203 1 2496 42 7 0 chr10 67441116 67441423 -72875342 - AluY SINE Alu -2 309 1 2281 64 0 16 chr10 67441425 67441737 -72875028 - AluY SINE Alu -4 307 1 392 200 13 0 chr10 67441889 67441964 -72874801 + AluSp/q SINE Alu 228 303 0 1997 122 3 3 chr10 67442113 67442409 -72874356 - AluSx SINE Alu -10 302 7 513 245 88 85 chr10 67442593 67442775 -72873990 + L1M2 LINE L1 5217 5402 -898 1214 167 167 0 chr10 67442775 67442892 -72873873 + AluJo SINE Alu 1 97 -215 243 0 0 0 chr10 67442892 67442919 -72873846 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1214 167 167 0 chr10 67442919 67443052 -72873713 + AluJo SINE Alu 97 293 -19 513 245 88 85 chr10 67443052 67443225 -72873540 + L1M2 LINE L1 5402 5573 -727 7735 137 88 50 chr10 67443241 67444750 -72872015 + pTR5 LTR ERV1 142 2295 -143 2090 93 10 7 chr10 67445842 67446144 -72870621 + AluSx SINE Alu 1 303 -9 2119 123 0 3 chr10 67446194 67446532 -72870233 + AluSx SINE Alu 1 337 0 1187 161 9 0 chr10 67446533 67446744 -72870021 + L1MD3 LINE L1 7770 7982 -13 1879 111 56 3 chr10 67446752 67447040 -72869725 + AluSc SINE Alu 1 303 -6 346 264 64 18 chr10 67447201 67447311 -72869454 + L1ME4a LINE L1 6007 6121 0 2197 97 3 0 chr10 67447318 67447627 -72869138 + AluSx SINE Alu 3 312 0 994 142 34 60 chr10 67448013 67448188 -72868577 - AluSg/x SINE Alu -1 311 133 387 0 0 0 chr10 67448188 67448231 -72868534 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1735 176 0 3 chr10 67448231 67448515 -72868250 - AluJb SINE Alu -29 283 1 994 142 34 60 chr10 67448515 67448571 -72868194 - AluSg/x SINE Alu -177 135 85 529 157 0 0 chr10 67448571 67448654 -72868111 - AluSp/q SINE Alu -63 250 168 1691 144 12 47 chr10 67449169 67449488 -72867277 + AluJb SINE Alu 5 312 0 2218 96 7 0 chr10 67449492 67449794 -72866971 + AluSg SINE Alu 1 304 -6 500 244 80 75 chr10 67450950 67451072 -72865693 - MIR SINE MIR 0 262 137 1564 177 3 19 chr10 67451072 67451382 -72865383 - AluJo SINE Alu -7 305 1 500 244 80 75 chr10 67451382 67451472 -72865293 - MIR SINE MIR -125 137 49 347 122 0 56 chr10 67451481 67451571 -72865194 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 280 177 48 32 chr10 67451676 67451738 -72865027 - L1ME3 LINE L1 -80 6082 6020 2360 56 3 3 chr10 67451809 67452113 -72864652 - AluY SINE Alu -7 304 1 274 221 105 23 chr10 67452426 67452512 -72864253 - AluJ/FLAM SINE Alu -234 68 1 234 150 0 0 chr10 67452597 67452637 -72864128 + (TA)n Simple_repeat Simple_repeat 2 41 0 231 36 0 0 chr10 67452637 67452665 -72864100 + (CA)n Simple_repeat Simple_repeat 2 29 0 1837 153 0 17 chr10 67452665 67452960 -72863805 - AluSx SINE Alu -22 290 1 269 220 0 51 chr10 67453052 67453111 -72863654 - L2 LINE L2 0 3272 3217 491 265 48 74 chr10 67453227 67453457 -72863308 - L2 LINE L2 -220 3052 2829 349 211 89 22 chr10 67453517 67453607 -72863158 - MIR SINE MIR -109 153 58 1931 112 18 0 chr10 67454008 67454320 -72862445 - AluSx SINE Alu 0 317 1 1650 125 45 42 chr10 67454328 67454615 -72862150 - AluSx SINE Alu -24 288 1 988 238 217 19 chr10 67454670 67455044 -72861721 + L1ME3A LINE L1 5450 5897 -273 1806 113 20 20 chr10 67455055 67455355 -72861410 - AluSx SINE Alu -7 305 6 1082 223 33 30 chr10 67455491 67455792 -72860973 + L1ME3A LINE L1 5866 6167 -3 2074 94 0 20 chr10 67455977 67456275 -72860490 - AluSg SINE Alu -10 300 9 2544 36 0 0 chr10 67456928 67457231 -72859534 - AluY SINE Alu -8 303 1 1462 103 0 83 chr10 67457231 67457411 -72859354 - AluSx SINE Alu 0 312 119 208 51 26 26 chr10 67457411 67457450 -72859315 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2133 91 3 0 chr10 67457450 67457735 -72859030 - AluSp SINE Alu -27 286 1 1462 103 0 83 chr10 67457735 67457853 -72858912 - AluSx SINE Alu -191 121 38 2038 116 0 13 chr10 67458272 67458582 -72858183 - L1M3 LINE L1 -375 5805 5500 919 129 7 7 chr10 67458588 67458728 -72858037 - AluJo/FRAM SINE Alu -11 301 162 2110 90 7 0 chr10 67458730 67459019 -72857746 + AluSx SINE Alu 1 291 -21 246 235 25 25 chr10 67459180 67459261 -72857504 - MLT1K LTR MaLR -3 585 505 1093 246 100 53 chr10 67459262 67459695 -72857070 + MLT2B1 LTR ERVL 1 461 -59 273 57 0 0 chr10 67459695 67459730 -72857035 + (CA)n Simple_repeat Simple_repeat 2 36 0 1093 246 100 53 chr10 67459730 67459788 -72856977 + MLT2B1 LTR ERVL 461 515 -5 293 173 0 19 chr10 67459789 67459841 -72856924 - AluSp SINE Alu -101 202 152 237 220 34 0 chr10 67459877 67459936 -72856829 + L1ME1 LINE L1 6103 6163 -3 348 254 74 8 chr10 67459958 67460080 -72856685 + L1ME4a LINE L1 5936 6065 -56 363 285 146 0 chr10 67460497 67460620 -72856145 + MIR SINE MIR 53 193 -69 2160 99 3 3 chr10 67460622 67460926 -72855839 - AluSq SINE Alu -9 304 1 1730 57 0 0 chr10 67461257 67461467 -72855298 + L1PA8 LINE L1 5960 6169 -3 526 315 135 17 chr10 67461517 67461999 -72854766 + L1MC4a LINE L1 5627 6165 -1643 2514 39 0 10 chr10 67462349 67462658 -72854107 + AluYa5 SINE Alu 1 306 -5 1643 108 74 139 chr10 67462658 67463038 -72853727 + L1MB3 LINE L1 5828 6182 -1 2290 87 0 13 chr10 67463661 67463973 -72852792 - AluSg SINE Alu -2 308 1 389 244 38 76 chr10 67463973 67464057 -72852708 - L1ME4a LINE L1 -178 5943 5864 1519 163 20 27 chr10 67464057 67464358 -72852407 - AluJo SINE Alu -13 299 1 389 244 38 76 chr10 67464358 67464404 -72852361 - L1ME4a LINE L1 -257 5864 5818 547 87 43 43 chr10 67465340 67465432 -72851333 - AluSq/x SINE Alu -165 148 57 2110 117 0 3 chr10 67465597 67465906 -72850859 - AluSc SINE Alu -1 308 1 636 115 29 29 chr10 67465906 67466010 -72850755 - AluSq/x SINE Alu -175 138 35 275 167 13 154 chr10 67466010 67466050 -72850715 + L2 LINE L2 3202 3227 -86 2051 115 14 0 chr10 67466050 67466338 -72850427 - AluSx SINE Alu -20 292 1 275 167 13 154 chr10 67466338 67466375 -72850390 + L2 LINE L2 3227 3268 -45 2182 107 3 0 chr10 67466384 67466683 -72850082 - AluSp SINE Alu -13 300 1 341 99 0 62 chr10 67466715 67466796 -72849969 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 215 295 16 39 chr10 67467063 67467177 -72849588 - MIR3 SINE MIR -53 155 85 1268 70 0 0 chr10 67467402 67467559 -72849206 - AluY SINE Alu -154 157 1 958 268 96 0 chr10 67467560 67467873 -72848892 - L1ME4a LINE L1 -471 5699 5357 1607 127 0 4 chr10 67467921 67468178 -72848587 + AluSx SINE Alu 46 301 0 1825 275 72 24 chr10 67468211 67468840 -72847925 + MLT2F LTR ERVL 3 661 -2 1963 135 0 3 chr10 67468863 67469160 -72847605 + AluSx SINE Alu 1 296 -16 1023 178 0 0 chr10 67469163 67469332 -72847433 + AluJo SINE Alu 1 169 -143 307 196 0 0 chr10 67469432 67469483 -72847282 - AluY SINE Alu -56 245 195 2310 77 3 0 chr10 67469511 67469811 -72846954 + AluSp SINE Alu 2 302 -11 1015 185 6 0 chr10 67469811 67469989 -72846776 + AluJo/FRAM SINE Alu 134 312 0 1558 199 16 0 chr10 67470039 67470346 -72846419 - AluSx SINE Alu 0 312 1 931 125 0 26 chr10 67470701 67470853 -72845912 - AluSg/x SINE Alu -8 304 157 184 363 24 24 chr10 67470933 67471057 -72845708 + MER5A DNA MER1_type 2 125 -64 2104 91 30 3 chr10 67471060 67471356 -72845409 - AluSx SINE Alu -6 306 3 719 113 7 66 chr10 67471366 67471517 -72845248 - AluSg/x SINE Alu -22 288 147 677 348 106 9 chr10 67571612 67571746 -72745019 - L2 LINE L2 -2 3311 3191 4552 151 31 37 chr10 67571746 67572460 -72744305 + MER6 DNA MER2_type 1 711 -154 2004 142 3 0 chr10 67572460 67572763 -72744002 + AluSx SINE Alu 1 304 -8 4552 151 31 37 chr10 67572763 67572918 -72743847 + MER6 DNA MER2_type 711 865 0 677 348 106 9 chr10 67572918 67573226 -72743539 - L2 LINE L2 -122 3191 2826 1275 249 18 80 chr10 67573237 67573708 -72743057 + MLT2B1 LTR ERVL 5 439 -81 330 26 0 0 chr10 67573708 67573747 -72743018 + (CA)n Simple_repeat Simple_repeat 2 40 0 1275 249 18 80 chr10 67573747 67573825 -72742940 + MLT2B1 LTR ERVL 439 520 0 1140 293 46 24 chr10 67573827 67574288 -72742477 - L2 LINE L2 -580 2734 2264 1959 174 22 54 chr10 67574662 67575071 -72741694 + MSTD LTR MaLR 1 396 0 271 336 63 21 chr10 67575571 67575714 -72741051 + MIR3 SINE MIR 59 207 -1 357 24 0 0 chr10 67575727 67575769 -72740996 + (TG)n Simple_repeat Simple_repeat 2 43 0 197 314 22 51 chr10 67576540 67576677 -72740088 - MIR3 SINE MIR 0 208 76 212 292 28 0 chr10 67576678 67576750 -72740015 - MIR SINE MIR -103 105 32 273 300 58 50 chr10 67576824 67576944 -72739821 + L2 LINE L2 3171 3291 -22 2004 157 33 30 chr10 67577353 67577716 -72739049 + THE1B LTR MaLR 1 364 0 2142 110 0 31 chr10 67578602 67578919 -72737846 + AluSq SINE Alu 1 307 -6 218 235 101 67 chr10 67578955 67578998 -72737767 - L2 LINE L2 -46 3267 3227 2163 118 7 0 chr10 67578998 67579295 -72737470 + AluSx SINE Alu 1 299 -13 218 235 101 67 chr10 67579295 67579430 -72737335 - L2 LINE L2 -86 3227 3083 350 294 85 13 chr10 67579546 67579699 -72737066 - Charlie8 DNA MER1_type -2217 200 37 1652 140 64 0 chr10 67579837 67580102 -72736663 + AluSg SINE Alu 1 282 -28 29 0 0 0 chr10 67580105 67580134 -72736631 + AT_rich Low_complexity Low_complexity 1 29 0 237 139 0 0 chr10 67581598 67581641 -72735124 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2402 81 0 10 chr10 67581804 67582114 -72734651 + AluSp SINE Alu 1 307 -6 374 328 103 6 chr10 67582722 67582896 -72733869 - MIR SINE MIR -52 210 20 2108 130 0 0 chr10 67582915 67583223 -72733542 + AluSx SINE Alu 2 309 0 5410 123 9 30 chr10 67583223 67584109 -72732656 - L1PA16 LINE L1 -10 6156 5290 1270 226 0 3 chr10 67584110 67584397 -72732368 + L1P LINE L1 4814 5099 -1047 654 296 77 27 chr10 67584506 67584803 -72731962 - LTR16B LTR ERVL -103 361 50 227 209 209 61 chr10 67585363 67585478 -72731287 - L2 LINE L2 -2 3311 3180 23 0 0 0 chr10 67585917 67585940 -72730825 + AT_rich Low_complexity Low_complexity 1 23 0 518 275 99 20 chr10 67589481 67589714 -72727051 - MIR SINE MIR -6 256 8 205 325 76 86 chr10 67590273 67590682 -72726083 - L2 LINE L2 -353 2961 2557 266 293 55 19 chr10 67590864 67591043 -72725722 + MLT1J2 LTR MaLR 273 409 0 685 179 75 52 chr10 67593434 67593607 -72723158 + MER5B DNA MER1_type 2 178 0 441 305 52 0 chr10 67594057 67594211 -72722554 - MIR SINE MIR -43 219 58 2262 126 96 30 chr10 67594389 67594794 -72721971 - MSTB1 LTR MaLR 0 432 1 2195 206 149 0 chr10 67594794 67595285 -72721480 + MLT1F1 LTR MaLR 4 567 0 298 333 16 16 chr10 67598290 67598416 -72718349 - L2 LINE L2 -322 2991 2866 1771 221 85 37 chr10 67598434 67599024 -72717741 + MLT1E2 LTR MaLR 1 538 -4 5653 133 30 11 chr10 67599150 67600081 -72716684 + L1MC1 LINE L1 5385 6333 0 1096 324 76 67 chr10 67600087 67600318 -72716447 - L2 LINE L2 -711 2603 2375 2363 93 0 0 chr10 67600318 67600618 -72716147 - AluSx SINE Alu -12 300 1 1096 324 76 67 chr10 67600618 67601455 -72715310 - L2 LINE L2 -939 2375 1526 262 296 102 11 chr10 67602441 67602529 -72714236 + MIR SINE MIR 20 115 -93 187 296 37 56 chr10 67604677 67604785 -72711980 - MIR SINE MIR -79 183 78 28 0 0 0 chr10 67605510 67605538 -72711227 + AT_rich Low_complexity Low_complexity 1 28 0 186 118 0 0 chr10 67605570 67605604 -72711161 + (A)n Simple_repeat Simple_repeat 1 34 0 199 330 187 0 chr10 67605774 67605865 -72710900 + MIR SINE MIR 34 141 -67 22 35 0 0 chr10 67605984 67606013 -72710752 + AT_rich Low_complexity Low_complexity 1 29 0 618 288 83 15 chr10 67606089 67606294 -72710471 + MIR SINE MIR 4 222 -40 2003 106 0 63 chr10 67606323 67606656 -72710109 + AluSp SINE Alu 1 314 0 235 328 116 43 chr10 67607212 67607609 -72709156 + L2 LINE L2 2847 3272 0 357 297 193 10 chr10 67607666 67607868 -72708897 + L1MC4a LINE L1 5814 6052 -1756 21 100 0 0 chr10 67607947 67608017 -72708748 + AT_rich Low_complexity Low_complexity 1 70 0 633 252 117 88 chr10 67608333 67608863 -72707902 + L1MC5 LINE L1 6642 7141 -820 * 3022 182 39 25 chr10 67608855 67609005 -72707760 + L1MB1 LINE L1 4629 4775 -1559 203 88 29 0 chr10 67609005 67609039 -72707726 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 3022 182 39 25 chr10 67609039 67609915 -72706850 + L1MB1 LINE L1 4775 5671 -663 36580 94 9 8 chr10 67609923 67616047 -72700718 + L1PA6 LINE L1 11 6141 -13 2399 156 81 8 chr10 67616051 67616532 -72700233 + L1MB1 LINE L1 5653 6168 0 664 225 60 18 chr10 67616549 67617015 -72699750 + L1MC5 LINE L1 7119 7415 -393 195 69 0 0 chr10 67617170 67617199 -72699566 + (TG)n Simple_repeat Simple_repeat 1 29 0 523 232 70 79 chr10 67617216 67617531 -72699234 + L1MC5 LINE L1 7623 7934 -27 24 32 0 0 chr10 67619202 67619233 -72697532 + AT_rich Low_complexity Low_complexity 1 31 0 232 359 78 0 chr10 67619366 67619469 -72697296 + L2 LINE L2 3173 3283 -30 1961 126 22 0 chr10 67619760 67620070 -72696695 + AluSp SINE Alu 1 316 0 226 284 114 62 chr10 67620403 67620579 -72696186 - L2 LINE L2 -9 3304 3120 340 331 46 0 chr10 67622118 67622248 -72694517 + MIR3 SINE MIR 40 175 -33 2717 32 0 0 chr10 67623485 67623796 -72692969 + AluY SINE Alu 1 311 0 634 304 108 54 chr10 67624279 67624655 -72692110 + HAL1 LINE L1 375 729 -1778 1961 87 0 0 chr10 67624655 67624907 -72691858 - AluY SINE Alu -9 302 51 634 304 108 54 chr10 67624907 67625214 -72691551 + HAL1 LINE L1 729 1095 -1412 659 200 160 0 chr10 67625227 67625377 -72691388 - MER58A DNA MER1_type -2 222 49 1631 255 82 12 chr10 67625517 67626117 -72690648 + HAL1 LINE L1 1152 1793 -714 299 130 19 0 chr10 67626224 67626278 -72690487 + (TA)n Simple_repeat Simple_repeat 1 55 0 2155 112 0 7 chr10 67626280 67626574 -72690191 - AluSc SINE Alu -15 294 3 327 289 178 21 chr10 67626659 67626901 -72689864 + HAL1 LINE L1 2025 2304 -203 305 182 148 57 chr10 67627277 67627365 -72689400 + MER21B LTR ERV1 710 805 -58 613 227 184 35 chr10 67627475 67627731 -72689034 + L2 LINE L2 3020 3313 0 2350 93 0 0 chr10 67629381 67629683 -72687082 + AluY SINE Alu 1 302 -9 230 191 118 145 chr10 67629688 67629840 -72686925 + L1MC5 LINE L1 7754 7901 -60 278 230 81 0 chr10 67630784 67630858 -72685907 - MIR SINE MIR -77 185 106 22 0 0 0 chr10 67631117 67631139 -72685626 + AT_rich Low_complexity Low_complexity 1 22 0 799 261 88 27 chr10 67631221 67631516 -72685249 + L2 LINE L2 2333 2645 -669 1079 241 34 64 chr10 67631527 67631898 -72684867 - MLT1A1 LTR MaLR -2 363 1 1093 276 117 24 chr10 67631898 67632461 -72684304 + L2 LINE L2 2691 3312 -1 1571 119 23 0 chr10 67633343 67633603 -72683162 - L1MA2 LINE L1 0 6304 6039 387 333 36 0 chr10 67634405 67634516 -72682249 - L2 LINE L2 -9 3304 3190 227 313 104 15 chr10 67634601 67634735 -72682030 + MER5A DNA MER1_type 44 189 0 825 254 71 13 chr10 67635258 67635482 -72681283 - MIR SINE MIR -24 238 2 624 286 77 13 chr10 67635644 67635878 -72680887 + MIR SINE MIR 1 249 -13 23 54 0 0 chr10 67637339 67637376 -72679389 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 67641718 67641739 -72675026 + AT_rich Low_complexity Low_complexity 1 21 0 263 380 72 12 chr10 67643415 67643581 -72673184 + MIR SINE MIR 15 190 -72 22 0 0 0 chr10 67646154 67646176 -72670589 + AT_rich Low_complexity Low_complexity 1 22 0 229 174 130 0 chr10 67646338 67646384 -72670381 - L3 LINE CR1 -204 1373 1322 300 179 19 113 chr10 67646991 67647097 -72669668 - L1MDa LINE L1 -4036 2504 2409 245 303 198 6 chr10 67647697 67647859 -72668906 + MIR SINE MIR 20 212 -50 217 324 0 14 chr10 67647889 67647963 -72668802 + MIR SINE MIR 163 235 -27 184 321 114 22 chr10 67648200 67648384 -72668381 + L2 LINE L2 2839 3039 -233 2183 165 43 17 chr10 67648775 67649194 -72667571 - Tigger2a DNA MER2_type -1 433 4 1276 164 108 34 chr10 67650741 67651009 -72665756 + AluJo SINE Alu 1 288 -24 297 194 46 0 chr10 67652576 67652659 -72664106 + MIR SINE MIR 117 203 -59 261 0 0 0 chr10 67653076 67653105 -72663660 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 306 106 0 0 chr10 67653104 67653151 -72663614 + (TG)n Simple_repeat Simple_repeat 2 48 0 238 263 18 0 chr10 67653151 67653208 -72663557 + CT-rich Low_complexity Low_complexity 2 59 0 235 200 46 15 chr10 67653759 67653824 -72662941 + MIR SINE MIR 131 197 -65 14962 127 9 38 chr10 67654230 67656721 -72660044 - Tigger1 DNA MER2_type 0 2418 1 1210 223 46 21 chr10 67656919 67657247 -72659518 - L1ME3A LINE L1 -8 6162 5827 219 222 0 0 chr10 67658031 67658076 -72658689 + CT-rich Low_complexity Low_complexity 1 45 0 1998 153 20 14 chr10 67658349 67658695 -72658070 - MER7A DNA MER2_type 0 346 1 2343 83 0 7 chr10 67659803 67660105 -72656660 + AluSp SINE Alu 3 302 -11 31 0 0 0 chr10 67661103 67661134 -72655631 + AT_rich Low_complexity Low_complexity 1 31 0 270 0 0 0 chr10 67661616 67661646 -72655119 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 99 17 10 chr10 67661650 67661943 -72654822 - AluSx SINE Alu -17 295 1 703 281 75 13 chr10 67661947 67662175 -72654590 - MIR SINE MIR -7 255 14 610 321 54 0 chr10 67664345 67664569 -72652196 + MIR SINE MIR 27 262 0 23 0 0 0 chr10 67664667 67664690 -72652075 + AT_rich Low_complexity Low_complexity 1 23 0 220 200 0 0 chr10 67664974 67665014 -72651751 - MER91 DNA MER1_type 0 140 101 214 348 22 34 chr10 67665359 67665448 -72651317 + MIR3 SINE MIR 11 98 -110 191 230 95 40 chr10 67665814 67665888 -72650877 + L2 LINE L2 2179 2256 -1058 * 389 336 67 18 chr10 67665842 67666065 -72650700 - MIR SINE MIR 0 262 29 286 281 0 0 chr10 67666082 67666146 -72650619 + L2 LINE L2 3205 3268 -4 325 329 142 52 chr10 67666604 67666759 -72650006 + MER91A DNA MER1_type 28 196 0 212 238 0 79 chr10 67666772 67666835 -72649930 + MER5A DNA MER1_type 132 189 0 362 242 0 42 chr10 67667898 67667993 -72648772 - L1MC4 LINE L1 -1338 6704 6614 548 291 44 0 chr10 67668114 67668296 -72648469 - LTR33 LTR ERVL 0 521 332 524 284 73 35 chr10 67668349 67668581 -72648184 - LTR33 LTR ERVL -280 241 1 191 380 53 26 chr10 67668585 67668698 -72648067 + MIR3 SINE MIR 82 197 -11 234 0 0 0 chr10 67668836 67668862 -72647903 + (A)n Simple_repeat Simple_repeat 1 26 0 412 347 80 6 chr10 67669998 67670174 -72646591 + MIR3 SINE MIR 15 203 -5 869 250 54 13 chr10 67671437 67671753 -72645012 - Charlie4a DNA MER1_type -4 504 176 2605 259 88 64 chr10 67671758 67672927 -72643838 + L2 LINE L2 1794 3046 -267 2288 103 0 10 chr10 67672927 67673238 -72643527 - AluSc SINE Alu -1 308 1 2605 259 88 64 chr10 67673238 67673513 -72643252 + L2 LINE L2 3046 3313 0 373 308 31 23 chr10 67673770 67673913 -72642852 + MIR SINE MIR 20 163 -45 2132 105 0 30 chr10 67674373 67674677 -72642088 - AluSc SINE Alu -14 295 1 2366 101 0 0 chr10 67675782 67676089 -72640676 + AluSc SINE Alu 1 307 -2 351 299 0 0 chr10 67676576 67676673 -72640092 + MIR SINE MIR 90 186 -76 290 261 23 0 chr10 67677861 67677949 -72638816 + L1MC4 LINE L1 6614 6703 -1339 29 28 0 0 chr10 67678855 67678891 -72637874 + AT_rich Low_complexity Low_complexity 1 36 0 284 288 14 0 chr10 67679101 67679174 -72637591 + L2 LINE L2 3240 3313 0 2078 127 0 0 chr10 67679262 67679570 -72637195 + AluSx SINE Alu 1 308 0 716 286 153 21 chr10 67679630 67680161 -72636604 - L1ME4a LINE L1 0 6121 5521 2374 79 0 3 chr10 67681673 67681965 -72634800 + AluSg SINE Alu 1 291 -19 271 298 220 12 chr10 67682007 67682175 -72634590 + MIR SINE MIR 48 250 -12 661 187 8 8 chr10 67682858 67682981 -72633784 - FLAM_A SINE Alu -10 123 1 1639 104 0 5 chr10 67683228 67683450 -72633315 - AluSg/x SINE Alu -2 308 88 264 91 0 0 chr10 67683615 67683648 -72633117 + U2 snRNA snRNA 1 33 -155 22 0 0 0 chr10 67684087 67684109 -72632656 + AT_rich Low_complexity Low_complexity 1 22 0 2015 118 11 3 chr10 67684162 67684449 -72632316 - AluSg SINE Alu -21 289 1 384 235 54 13 chr10 67684456 67684471 -72632294 - L1MA10 LINE L1 -2 6332 6318 1025 218 42 24 chr10 67684471 67684760 -72632005 - L1ME2 LINE L1 -9 6155 5862 2044 213 24 38 chr10 67684850 67685423 -72631342 - L1ME2 LINE L1 -331 5833 5269 395 324 84 90 chr10 67686578 67686921 -72629844 - L2 LINE L2 -2 3270 2930 192 77 0 0 chr10 67687373 67687399 -72629366 + (TTTTTG)n Simple_repeat Simple_repeat 6 31 0 2294 96 3 0 chr10 67687684 67687976 -72628789 + AluSc SINE Alu 1 293 -16 267 152 0 0 chr10 67688574 67688620 -72628145 + (CA)n Simple_repeat Simple_repeat 1 46 0 960 75 11 145 chr10 67688662 67688771 -72627994 + L1MB1 LINE L1 6001 6076 -113 2360 107 0 3 chr10 67688771 67689081 -72627684 + AluSx SINE Alu 1 309 -3 960 75 11 145 chr10 67689081 67689157 -72627608 + L1MB1 LINE L1 6076 6161 -28 24 53 0 0 chr10 67689266 67689304 -72627461 + AT_rich Low_complexity Low_complexity 1 38 0 2167 119 7 10 chr10 67689483 67689793 -72626972 - AluSx SINE Alu -1 311 3 551 318 38 17 chr10 67690034 67690270 -72626495 + MIR SINE MIR 21 261 -1 2254 100 10 0 chr10 67691421 67691731 -72625034 - AluSp SINE Alu 0 313 1 557 309 87 10 chr10 67692830 67693037 -72623728 + MIR SINE MIR 23 245 -17 22 0 0 0 chr10 67693672 67693694 -72623071 + AT_rich Low_complexity Low_complexity 1 22 0 647 266 48 11 chr10 67694385 67694573 -72622192 - MIR SINE MIR 0 262 68 308 224 0 0 chr10 67694608 67694666 -72622099 - L2 LINE L2 -1 3312 3255 22 0 0 0 chr10 67695290 67695312 -72621453 + AT_rich Low_complexity Low_complexity 1 22 0 291 382 80 14 chr10 67695486 67695698 -72621067 + L2 LINE L2 2836 3061 -252 727 313 80 9 chr10 67695847 67696186 -72620579 - LTR33 LTR ERVL -145 376 14 2080 121 0 0 chr10 67696242 67696553 -72620212 - AluSc SINE Alu 0 311 1 1871 147 4 0 chr10 67696744 67697023 -72619742 + AluSx SINE Alu 2 281 -31 507 264 54 8 chr10 67697348 67697477 -72619288 - L2 LINE L2 0 3313 3179 510 276 248 33 chr10 67697486 67698006 -72618759 - L2 LINE L2 -258 3055 2423 340 328 36 52 chr10 67698606 67698798 -72617967 + MIR SINE MIR 1 189 -73 244 283 123 9 chr10 67700359 67700465 -72616300 + L2 LINE L2 3187 3304 -9 363 270 58 44 chr10 67701053 67701190 -72615575 - MIR3 SINE MIR -28 180 42 1114 92 0 0 chr10 67702091 67702232 -72614533 - AluSp SINE Alu -25 288 148 785 287 36 11 chr10 67702602 67702881 -72613884 - L1ME LINE L1 -560 5602 5317 236 185 0 31 chr10 67702898 67702963 -72613802 + CT-rich Low_complexity Low_complexity 3 65 0 497 295 100 42 chr10 67702969 67703488 -72613277 - L1ME LINE L1 -863 5283 4735 1021 292 115 44 chr10 67703597 67704003 -72612762 - MLT1G1 LTR MaLR -161 394 7 302 215 108 115 chr10 67704161 67704291 -72612474 - L2 LINE L2 -3 3310 3182 902 333 55 36 chr10 67705497 67706113 -72610652 + L2 LINE L2 2160 2787 -527 219 409 16 16 chr10 67706268 67706395 -72610370 + L2 LINE L2 2957 3083 -189 2097 120 3 7 chr10 67706891 67707199 -72609566 + AluSx SINE Alu 1 307 -5 454 324 83 67 chr10 67708295 67708656 -72608109 + L2 LINE L2 2372 2738 -576 284 262 125 0 chr10 67708920 67709088 -72607677 + L1MEc LINE L1 2216 2404 -3992 578 330 84 24 chr10 67709134 67709552 -72607213 + L1MEc LINE L1 2446 2888 -3327 23 42 0 21 chr10 67711534 67711548 -72605217 + AT_rich Low_complexity Low_complexity 1 14 -33 2333 97 0 0 chr10 67711548 67711857 -72604908 + AluSc SINE Alu 1 309 0 23 42 0 21 chr10 67711857 67711890 -72604875 + AT_rich Low_complexity Low_complexity 14 47 0 390 306 45 25 chr10 67712503 67712660 -72604105 + MIR3 SINE MIR 17 176 -32 22 35 0 0 chr10 67713365 67713394 -72603371 + AT_rich Low_complexity Low_complexity 1 29 0 519 226 18 18 chr10 67713991 67714155 -72602610 - MER103 DNA DNA -1 165 2 2222 125 0 0 chr10 67716210 67716513 -72600252 - AluSx SINE Alu -9 303 1 306 294 70 41 chr10 67716635 67716805 -72599960 - MIR SINE MIR -79 129 8 21 82 0 0 chr10 67717136 67717185 -72599580 + AT_rich Low_complexity Low_complexity 1 49 0 2032 131 0 7 chr10 67717325 67717623 -72599142 - AluSx SINE Alu -16 296 1 22 35 0 0 chr10 67718270 67718299 -72598466 + AT_rich Low_complexity Low_complexity 1 29 0 345 302 43 86 chr10 67718299 67718600 -72598165 - HAL1b LINE L1 -46 1302 1015 453 291 107 12 chr10 67718735 67718979 -72597786 - HAL1b LINE L1 -464 884 618 500 258 86 79 chr10 67719036 67719303 -72597462 - MLT1H LTR MaLR -49 500 232 480 305 60 9 chr10 67719393 67719626 -72597139 - HAL1b LINE L1 -739 609 365 21 0 0 0 chr10 67719644 67719665 -72597100 + AT_rich Low_complexity Low_complexity 1 21 0 312 307 0 23 chr10 67719742 67719830 -72596935 - HAL1b LINE L1 -1182 166 81 204 40 0 0 chr10 67720051 67720076 -72596689 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 24 53 0 0 chr10 67720865 67720903 -72595862 + AT_rich Low_complexity Low_complexity 1 38 0 211 286 32 16 chr10 67721332 67721395 -72595370 + L2 LINE L2 3242 3305 -8 2158 91 3 42 chr10 67721575 67721884 -72594881 + AluSc SINE Alu 1 297 -12 971 245 25 8 chr10 67722198 67722439 -72594326 - MIR SINE MIR -4 258 14 387 297 104 22 chr10 67722496 67722678 -72594087 - MIR SINE MIR -65 197 1 383 212 118 0 chr10 67722743 67722828 -72593937 - MIR3 SINE MIR -3 205 111 23 33 0 0 chr10 67722932 67722962 -72593803 + AT_rich Low_complexity Low_complexity 1 30 0 369 294 59 63 chr10 67723550 67723771 -72592994 - MIR SINE MIR -36 226 7 786 279 95 38 chr10 67725208 67725785 -72590980 - HAL1b LINE L1 -5 1343 734 617 284 126 35 chr10 67725888 67726342 -72590423 - HAL1b LINE L1 -742 606 112 184 299 31 134 chr10 67727484 67727611 -72589154 - L2 LINE L2 -4 3268 3155 252 0 0 0 chr10 67728253 67728281 -72588484 + (TG)n Simple_repeat Simple_repeat 1 28 0 2165 102 0 7 chr10 67728306 67728599 -72588166 - AluSx SINE Alu -21 291 1 26 50 0 0 chr10 67728604 67728644 -72588121 + AT_rich Low_complexity Low_complexity 1 40 0 1007 233 45 20 chr10 67729117 67729362 -72587403 + MIR SINE MIR 12 262 0 294 316 113 30 chr10 67729490 67729623 -72587142 + L2 LINE L2 3170 3313 0 2095 118 7 0 chr10 67729739 67730043 -72586722 - AluSp SINE Alu -5 308 3 409 304 43 22 chr10 67730062 67730200 -72586565 - MIR SINE MIR -75 187 47 290 361 46 23 chr10 67731073 67731203 -72585562 - L2 LINE L2 -7 3265 3133 21 57 0 0 chr10 67731944 67731979 -72584786 + AT_rich Low_complexity Low_complexity 1 35 0 193 383 29 37 chr10 67732553 67732796 -72583969 - L2 LINE L2 -1017 2297 2057 228 35 0 0 chr10 67732861 67732890 -72583875 + (TG)n Simple_repeat Simple_repeat 2 30 0 262 200 62 25 chr10 67733085 67733165 -72583600 + L1M4 LINE L1 4280 4362 -1784 2110 105 0 3 chr10 67733183 67733491 -72583274 + AluY SINE Alu 1 307 0 877 207 36 0 chr10 67733491 67733713 -72583052 + L1M4 LINE L1 4454 4683 -1463 2241 153 32 121 chr10 67734506 67735060 -72581705 - MLT1D LTR MaLR 0 505 1 336 337 39 10 chr10 67735099 67735304 -72581461 - MARNA DNA Mariner -13 573 363 2168 91 13 10 chr10 67735375 67735683 -72581082 + AluSp SINE Alu 1 309 -4 210 71 0 0 chr10 67735683 67735711 -72581054 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 4145 27 0 0 chr10 67736315 67736799 -72579966 + L1PA3 LINE L1 5672 6155 0 36 91 0 0 chr10 67736890 67736989 -72579776 + AT_rich Low_complexity Low_complexity 1 99 0 243 355 0 11 chr10 67737685 67737778 -72578987 + GA-rich Low_complexity Low_complexity 4 95 0 2145 90 19 29 chr10 67737946 67738256 -72578509 - AluSc SINE Alu -2 307 1 334 250 62 86 chr10 67738479 67738607 -72578158 - MIR SINE MIR -60 202 78 206 341 177 22 chr10 67739865 67740182 -72576583 + L3b LINE CR1 1102 1467 -116 597 239 117 5 chr10 67740293 67740481 -72576284 - MER3 DNA MER1_type 0 209 1 21 36 0 0 chr10 67740558 67740586 -72576179 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 67740892 67740923 -72575842 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 67741020 67741048 -72575717 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 67741082 67741108 -72575657 + AT_rich Low_complexity Low_complexity 1 26 0 2152 96 7 0 chr10 67741251 67741558 -72575207 + AluSq SINE Alu 1 309 0 421 327 77 12 chr10 67742596 67742764 -72574001 - MIR SINE MIR -52 210 32 790 214 181 0 chr10 67744092 67744274 -72572491 - MIR SINE MIR -21 241 27 2074 113 3 3 chr10 67744299 67744599 -72572166 - AluSx SINE Alu -12 300 1 334 287 78 26 chr10 67744825 67744940 -72571825 - L2 LINE L2 0 3272 3152 606 172 0 0 chr10 67746670 67746791 -72569974 - AluJb SINE Alu 0 310 190 952 88 8 0 chr10 67746803 67746928 -72569837 - AluSp/q SINE Alu -19 294 169 1091 76 0 0 chr10 67746929 67747060 -72569705 + AluSg SINE Alu 19 149 -161 551 196 125 0 chr10 67747074 67747186 -72569579 - AluJb SINE Alu -186 126 1 276 322 249 27 chr10 67747286 67747615 -72569150 - L2 LINE L2 -61 3252 2851 228 67 0 0 chr10 67747896 67747926 -72568839 + (A)n Simple_repeat Simple_repeat 1 30 0 485 327 139 30 chr10 67747996 67748326 -72568439 - L2 LINE L2 -533 2781 2416 21 36 0 0 chr10 67748722 67748750 -72568015 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 67750002 67750024 -72566741 + AT_rich Low_complexity Low_complexity 1 22 0 257 358 78 37 chr10 67752680 67752923 -72563842 - L2 LINE L2 -633 2681 2429 183 80 0 0 chr10 67753655 67753680 -72563085 + (T)n Simple_repeat Simple_repeat 1 25 0 1659 123 12 4 chr10 67754471 67754724 -72562041 - L1PA16 LINE L1 -9 6157 5903 593 256 93 61 chr10 67755299 67755545 -72561220 + MIR SINE MIR 2 255 -7 24 32 0 0 chr10 67756100 67756131 -72560634 + AT_rich Low_complexity Low_complexity 1 31 0 257 67 0 22 chr10 67756131 67756176 -72560589 + (TTG)n Simple_repeat Simple_repeat 2 45 0 226 313 82 37 chr10 67756439 67756573 -72560192 - MIR SINE MIR -35 173 34 192 40 0 0 chr10 67758453 67758478 -72558287 + (TTAAA)n Simple_repeat Simple_repeat 5 29 0 22 0 0 0 chr10 67758807 67758829 -72557936 + AT_rich Low_complexity Low_complexity 1 22 0 182 245 113 66 chr10 67761903 67762009 -72554756 + MIR3 SINE MIR 91 201 -7 938 94 0 0 chr10 67762175 67762303 -72554462 - AluSg/x SINE Alu -2 310 183 612 138 0 0 chr10 67762342 67762429 -72554336 - AluSc SINE Alu -222 87 1 2230 105 0 0 chr10 67762484 67762780 -72553985 - AluSx SINE Alu -16 296 1 369 0 0 0 chr10 67763039 67763080 -72553685 + (TC)n Simple_repeat Simple_repeat 1 41 0 210 37 0 0 chr10 67763477 67763504 -72553261 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 214 354 0 31 chr10 67764052 67764148 -72552617 - MER5B DNA MER1_type -84 94 2 23 33 0 0 chr10 67764915 67764945 -72551820 + AT_rich Low_complexity Low_complexity 1 30 0 301 354 35 9 chr10 67766142 67766255 -72550510 + MIR SINE MIR 30 145 -117 549 271 41 0 chr10 67767286 67767456 -72549309 + MER69 DNA AcHobo 227 403 -823 513 239 9 0 chr10 67767448 67767557 -72549208 + MER69 DNA AcHobo 2417 2526 0 * 2525 166 48 0 chr10 67768179 67768662 -72548103 - L1MA9 LINE L1 -1 6311 5806 1863 143 17 7 chr10 67771080 67771367 -72545398 + AluJb SINE Alu 1 290 -22 331 246 16 120 chr10 67771797 67771980 -72544785 + MLT1I LTR MaLR 244 407 -2 289 260 101 41 chr10 67773111 67773280 -72543485 - MIR SINE MIR -10 252 74 292 289 21 21 chr10 67773759 67773856 -72542909 + MLT2E LTR ERVL 35 131 -497 312 247 0 54 chr10 67774058 67774151 -72542614 + LTR33A LTR ERVL 436 523 0 24 67 0 0 chr10 67775469 67775514 -72541251 + AT_rich Low_complexity Low_complexity 1 45 0 323 305 96 7 chr10 67776250 67776389 -72540376 + MIR SINE MIR 40 188 -62 672 271 148 40 chr10 67776524 67776923 -72539842 + MLT1J1 LTR MaLR 1 442 -4 2222 102 7 3 chr10 67777242 67777537 -72539228 - AluSc SINE Alu -13 296 1 189 364 0 0 chr10 67778676 67778731 -72538034 - MER5A DNA MER1_type -92 97 43 231 133 0 0 chr10 67778781 67778826 -72537939 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 435 340 152 28 chr10 67779171 67779783 -72536982 - L2 LINE L2 -710 2604 1917 1881 124 23 0 chr10 67779826 67780092 -72536673 + AluSx SINE Alu 3 274 -38 24 32 0 0 chr10 67780095 67780126 -72536639 + AT_rich Low_complexity Low_complexity 1 31 0 208 135 0 27 chr10 67780128 67780165 -72536600 + (GAA)n Simple_repeat Simple_repeat 2 37 0 554 292 12 30 chr10 67780293 67780461 -72536304 - L3 LINE CR1 -3 1574 1410 2333 232 76 37 chr10 67780465 67780600 -72536165 - L1ME3A LINE L1 -3 6236 6108 267 31 0 0 chr10 67780600 67780632 -72536133 + (CACCC)n Simple_repeat Simple_repeat 4 35 0 2333 232 76 37 chr10 67780632 67781513 -72535252 - L1ME3A LINE L1 -131 6108 5158 2085 124 3 3 chr10 67781513 67781820 -72534945 + AluSc SINE Alu 1 307 -2 2333 232 76 37 chr10 67781820 67781874 -72534891 - L1ME3A LINE L1 -1081 5158 5108 420 290 65 75 chr10 67782223 67782796 -72533969 - L1ME3A LINE L1 -4596 1800 1234 1839 166 3 3 chr10 67783011 67783300 -72533465 - AluSx SINE Alu -23 289 1 318 308 28 21 chr10 67783368 67783511 -72533254 - L1ME3A LINE L1 -5461 935 792 330 313 146 18 chr10 67784288 67784569 -72532196 - L3 LINE CR1 -163 1414 1098 2163 108 14 0 chr10 67785081 67785376 -72531389 - AluSc SINE Alu -10 299 1 2671 49 0 0 chr10 67785389 67785696 -72531069 - AluY SINE Alu -4 307 1 210 37 0 0 chr10 67786217 67786244 -72530521 + (CA)n Simple_repeat Simple_repeat 1 27 0 254 309 45 27 chr10 67787312 67787422 -72529343 - MIR3 SINE MIR -11 197 86 374 328 145 37 chr10 67787906 67788867 -72527898 + L2 LINE L2 2246 3313 0 2246 109 0 0 chr10 67789559 67789862 -72526903 - AluY SINE Alu -8 303 1 2190 107 0 0 chr10 67790614 67790905 -72525860 + AluSg SINE Alu 1 291 -19 459 0 0 0 chr10 67790905 67790956 -72525809 + (CA)n Simple_repeat Simple_repeat 2 52 0 2527 52 0 0 chr10 67791674 67791979 -72524786 + AluY SINE Alu 1 305 -6 477 234 86 74 chr10 67792419 67792663 -72524102 - MIR SINE MIR -12 250 4 398 300 124 55 chr10 67792708 67793055 -72523710 + L2 LINE L2 2866 3236 -36 26 74 0 0 chr10 67793176 67793230 -72523535 + AT_rich Low_complexity Low_complexity 1 54 0 34 24 0 0 chr10 67795489 67795530 -72521235 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr10 67796114 67796135 -72520630 + AT_rich Low_complexity Low_complexity 1 21 0 199 203 29 14 chr10 67797126 67797195 -72519570 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 21 36 0 0 chr10 67798009 67798037 -72518728 + AT_rich Low_complexity Low_complexity 1 28 0 217 175 52 41 chr10 67798701 67798798 -72517967 + A-rich Low_complexity Low_complexity 4 101 0 194 412 24 36 chr10 67799042 67799207 -72517558 - L2 LINE L2 0 3272 3110 231 88 0 0 chr10 67799273 67799307 -72517458 + (TGAG)n Simple_repeat Simple_repeat 2 35 0 201 152 0 0 chr10 67799472 67799505 -72517260 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1187 209 62 56 chr10 67800031 67800371 -72516394 - MER2 DNA MER2_type -2 342 1 324 0 0 0 chr10 67800906 67800942 -72515823 + (TG)n Simple_repeat Simple_repeat 1 36 0 278 291 219 13 chr10 67801738 67801889 -72514876 + MIR SINE MIR 69 250 -12 236 247 27 0 chr10 67802520 67802593 -72514172 + (TA)n Simple_repeat Simple_repeat 1 75 0 26 0 0 0 chr10 67805892 67805918 -72510847 + AT_rich Low_complexity Low_complexity 1 26 0 219 273 45 18 chr10 67805997 67806107 -72510658 + (TATATG)n Simple_repeat Simple_repeat 5 117 0 251 239 11 0 chr10 67806198 67806286 -72510479 + (TA)n Simple_repeat Simple_repeat 2 90 0 297 209 0 15 chr10 67806478 67806545 -72510220 - HsTC2 DNA Tc2 -1813 85 20 21 57 0 0 chr10 67807386 67807421 -72509344 + AT_rich Low_complexity Low_complexity 1 35 0 446 279 62 11 chr10 67808194 67808373 -72508392 + MER5A DNA MER1_type 1 188 -1 21 36 0 0 chr10 67809391 67809419 -72507346 + AT_rich Low_complexity Low_complexity 1 28 0 242 208 0 0 chr10 67811928 67811976 -72504789 - MIR SINE MIR -53 209 162 312 293 40 0 chr10 67814252 67814351 -72502414 + MER5A DNA MER1_type 87 189 0 326 296 96 8 chr10 67814742 67814867 -72501898 - MIR SINE MIR -111 151 16 234 0 0 0 chr10 67816424 67816450 -72500315 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 451 239 137 88 chr10 67817671 67817876 -72498889 - MIR SINE MIR 0 262 48 2029 134 15 15 chr10 67818919 67819262 -72497503 + MER61A LTR ERV1 1 343 0 24 85 0 0 chr10 67819608 67819667 -72497098 + AT_rich Low_complexity Low_complexity 1 59 0 2198 100 3 0 chr10 67820751 67821052 -72495713 + AluY SINE Alu 1 302 -9 25 0 0 0 chr10 67822853 67822878 -72493887 + AT_rich Low_complexity Low_complexity 1 25 0 388 222 0 0 chr10 67824783 67824855 -72491910 - AluJ/FRAM SINE Alu -7 295 224 1253 143 24 24 chr10 67825068 67825277 -72491488 + AluJo SINE Alu 85 293 -19 21 57 0 0 chr10 67825621 67825656 -72491109 + AT_rich Low_complexity Low_complexity 1 35 0 324 0 0 0 chr10 67825898 67825934 -72490831 + (TG)n Simple_repeat Simple_repeat 2 37 0 1394 58 0 0 chr10 67826512 67826711 -72490054 + L1PA3 LINE L1 5978 6176 0 216 67 0 0 chr10 67826847 67826877 -72489888 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 205 156 0 0 chr10 67827194 67827226 -72489539 + CT-rich Low_complexity Low_complexity 4 35 0 230 0 33 0 chr10 67827910 67827940 -72488825 + (TA)n Simple_repeat Simple_repeat 2 32 0 243 192 19 0 chr10 67828097 67828149 -72488616 - L2 LINE L2 0 3313 3261 428 291 24 71 chr10 67828286 67828449 -72488316 + MIR3 SINE MIR 37 191 -17 220 258 45 0 chr10 67828995 67829061 -72487704 + L3 LINE CR1 599 667 -910 209 268 18 0 chr10 67829823 67829879 -72486886 - L2 LINE L2 0 3272 3216 21 36 0 0 chr10 67829883 67829911 -72486854 + AT_rich Low_complexity Low_complexity 1 28 0 187 273 0 0 chr10 67830488 67830532 -72486233 - L3 LINE CR1 -1 1576 1533 22 0 0 0 chr10 67831325 67831347 -72485418 + AT_rich Low_complexity Low_complexity 1 22 0 620 262 58 17 chr10 67832962 67833134 -72483631 - Charlie8 DNA MER1_type -2154 263 85 243 0 0 0 chr10 67833170 67833197 -72483568 + (A)n Simple_repeat Simple_repeat 1 27 0 183 184 0 82 chr10 67834460 67834509 -72482256 - L2 LINE L2 -1 3312 3268 590 220 187 0 chr10 67835175 67835325 -72481440 + MER5A DNA MER1_type 12 189 0 369 0 0 0 chr10 67835522 67835563 -72481202 + (TG)n Simple_repeat Simple_repeat 1 41 0 24 32 0 0 chr10 67836579 67836610 -72480155 + AT_rich Low_complexity Low_complexity 1 31 0 2036 89 0 95 chr10 67837435 67837771 -72478994 + AluSg SINE Alu 1 304 -6 228 111 0 0 chr10 67839055 67839091 -72477674 + (TG)n Simple_repeat Simple_repeat 1 36 0 298 345 70 7 chr10 67839168 67839310 -72477455 + L2 LINE L2 2381 2531 -783 740 152 36 14 chr10 67839313 67839451 -72477314 + MLT2D LTR ERVL 1 141 -273 21 0 0 0 chr10 67839946 67839967 -72476798 + AT_rich Low_complexity Low_complexity 1 21 0 205 299 52 41 chr10 67840283 67840380 -72476385 + L2 LINE L2 3137 3234 -38 183 286 18 0 chr10 67840972 67841028 -72475737 - L2 LINE L2 0 3272 3216 191 208 57 75 chr10 67842374 67842427 -72474338 + L2 LINE L2 3034 3085 -187 561 294 25 6 chr10 67842473 67842636 -72474129 + MIR SINE MIR 96 261 -1 195 324 15 15 chr10 67842675 67842743 -72474022 - L2 LINE L2 -33 3239 3172 180 191 95 155 chr10 67842814 67842898 -72473867 + L2 LINE L2 3220 3298 -15 292 337 114 76 chr10 67842982 67843704 -72473061 - L2 LINE L2 -430 2884 2136 3340 142 14 0 chr10 67843847 67844411 -72472354 + L1MA4A LINE L1 5732 6303 0 330 237 0 0 chr10 67844495 67844592 -72472173 + (CATA)n Simple_repeat Simple_repeat 2 98 0 466 293 171 15 chr10 67844971 67845041 -72471724 - MIR SINE MIR -6 256 198 692 239 0 0 chr10 67845041 67845171 -72471594 - FLAM_C SINE Alu -2 131 2 466 293 171 15 chr10 67845171 67845305 -72471460 - MIR SINE MIR -64 198 20 1585 159 44 44 chr10 67846588 67846884 -72469881 + AluJo SINE Alu 8 303 -9 22 0 0 0 chr10 67847004 67847026 -72469739 + AT_rich Low_complexity Low_complexity 1 22 0 252 149 0 0 chr10 67847727 67847774 -72468991 + (GA)n Simple_repeat Simple_repeat 2 48 0 44 0 0 0 chr10 67849090 67849134 -72467631 + AT_rich Low_complexity Low_complexity 1 44 0 1940 119 0 48 chr10 67850324 67850635 -72466130 - AluY SINE Alu -15 296 1 1675 109 0 9 chr10 67850671 67850901 -72465864 - AluSq SINE Alu -85 228 1 31 0 0 0 chr10 67851682 67851713 -72465052 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 67852961 67852989 -72463776 + AT_rich Low_complexity Low_complexity 1 28 0 14147 132 26 16 chr10 67853637 67853840 -72462925 - Tigger1 DNA MER2_type 0 2418 2218 2087 103 3 3 chr10 67853840 67854122 -72462643 + AluSc SINE Alu 1 282 -27 14147 132 26 16 chr10 67854122 67854343 -72462422 - Tigger1 DNA MER2_type -200 2218 2001 1809 126 65 27 chr10 67854343 67854636 -72462129 + AluSx SINE Alu 1 304 -8 14147 132 26 16 chr10 67854636 67856515 -72460250 - Tigger1 DNA MER2_type -417 2001 92 2238 103 7 10 chr10 67856607 67856917 -72459848 - AluSg SINE Alu -1 309 1 22 35 0 0 chr10 67856942 67856971 -72459794 + AT_rich Low_complexity Low_complexity 1 29 0 1757 167 61 9 chr10 67857959 67858289 -72458476 + MER7A DNA MER2_type 1 345 -1 642 274 104 11 chr10 67858403 67858628 -72458137 + MIR SINE MIR 15 252 -10 2427 61 0 0 chr10 67860492 67860789 -72455976 + AluY SINE Alu 1 297 -14 217 347 0 0 chr10 67860910 67860985 -72455780 + MIR SINE MIR 176 250 -12 25 0 0 0 chr10 67861332 67861357 -72455408 + AT_rich Low_complexity Low_complexity 1 25 0 234 259 62 25 chr10 67864037 67864118 -72452647 - MIR SINE MIR -6 256 173 * 523 257 16 82 chr10 67864099 67864139 -72452626 - MER5B DNA MER1_type -5 173 132 2217 115 0 0 chr10 67864139 67864435 -72452330 - AluSx SINE Alu -16 296 1 523 257 16 82 chr10 67864435 67864577 -72452188 - MER5B DNA MER1_type -46 132 3 418 299 70 9 chr10 67864580 67864772 -72451993 - MIR SINE MIR -56 206 2 25 51 0 0 chr10 67865249 67865288 -72451477 + AT_rich Low_complexity Low_complexity 1 39 0 512 298 33 28 chr10 67866181 67866396 -72450369 + L2 LINE L2 3098 3313 0 189 0 0 0 chr10 67866689 67866710 -72450055 + (TG)n Simple_repeat Simple_repeat 2 22 0 321 53 0 0 chr10 67866904 67866942 -72449823 + tRNA-Gly-GGA tRNA tRNA 1 38 -37 4615 230 26 14 chr10 67866970 67868227 -72448538 - L1 LINE L1 -2513 3633 2362 873 144 21 110 chr10 67868223 67868459 -72448306 + L1MB1 LINE L1 4104 4318 -1828 * 10203 146 4 7 chr10 67868459 67870071 -72446694 + Harlequin LTR ERV1 5289 6896 0 3881 54 17 0 chr10 67870072 67870553 -72446212 + LTR2B LTR ERV1 2 490 0 4391 191 14 21 chr10 67870554 67871593 -72445172 + L1MB1 LINE L1 4713 5697 -471 2003 142 7 0 chr10 67871593 67871895 -72444870 - AluJb SINE Alu -8 304 1 4391 191 14 21 chr10 67871895 67872362 -72444403 + L1MB1 LINE L1 5697 6166 -2 7168 231 71 38 chr10 67872375 67876826 -72439939 + L1MD2 LINE L1 2027 6636 0 965 312 50 72 chr10 67877924 67877984 -72438781 - MLT1G1 LTR MaLR -8 587 527 2341 96 0 0 chr10 67877984 67878286 -72438479 + AluSx SINE Alu 1 302 -10 965 312 50 72 chr10 67878286 67878825 -72437940 - MLT1G1 LTR MaLR -68 527 1 1812 146 10 14 chr10 67879010 67879305 -72437460 + AluSx SINE Alu 1 294 -18 8805 176 11 0 chr10 67879335 67881941 -72434824 + L1PA14 LINE L1 3540 6159 -2 1301 172 99 8 chr10 67881952 67882252 -72434513 + MER33 DNA MER1_type 1 301 -23 2308 101 3 0 chr10 67882450 67882756 -72434009 + AluSp SINE Alu 1 307 -6 891 200 11 17 chr10 67882759 67882939 -72433826 + AluJb SINE Alu 133 311 -1 326 322 64 56 chr10 67883130 67883521 -72433244 + L2 LINE L2 2835 3228 -44 209 108 27 0 chr10 67883673 67883710 -72433055 + (TA)n Simple_repeat Simple_repeat 1 38 0 2101 136 0 3 chr10 67883849 67884150 -72432615 + AluSx SINE Alu 1 300 -12 424 330 121 36 chr10 67884326 67884747 -72432018 + LTR16A LTR ERVL 1 457 0 397 113 0 38 chr10 67886247 67886327 -72430438 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 25 0 0 0 chr10 67886444 67886469 -72430296 + AT_rich Low_complexity Low_complexity 1 25 0 180 238 0 0 chr10 67886659 67886701 -72430064 - L2 LINE L2 -1 3312 3271 321 328 48 8 chr10 67887518 67887643 -72429122 - L2 LINE L2 0 3272 3143 2398 161 23 29 chr10 67887731 67888216 -72428549 + MLT1D LTR MaLR 20 501 -4 544 265 113 9 chr10 67889072 67889299 -72427466 + MER45C DNA AcHobo 1 265 -688 438 270 11 0 chr10 67889367 67889456 -72427309 + MER45C DNA AcHobo 714 803 -150 605 258 163 6 chr10 67889563 67889741 -72427024 + MER45C DNA AcHobo 747 952 -1 180 0 0 0 chr10 67890652 67890672 -72426093 + (A)n Simple_repeat Simple_repeat 1 20 0 1687 156 7 17 chr10 67890724 67891012 -72425753 + AluJo SINE Alu 21 305 -7 274 341 179 6 chr10 67891883 67892062 -72424703 + MIR SINE MIR 32 241 -21 257 258 102 46 chr10 67892088 67892271 -72424494 - MIR SINE MIR -40 222 33 23 0 0 0 chr10 67892353 67892376 -72424389 + AT_rich Low_complexity Low_complexity 1 23 0 283 222 0 33 chr10 67892756 67892846 -72423919 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 24 77 0 0 chr10 67892956 67893008 -72423757 + AT_rich Low_complexity Low_complexity 1 52 0 268 151 0 19 chr10 67893021 67893074 -72423691 - L1P LINE L1 -3277 2869 2818 8472 28 2 0 chr10 67893074 67894858 -72421907 + L1PA4 LINE L1 4367 6155 0 8400 130 8 2 chr10 67894877 67896168 -72420597 - HSMAR2 DNA Mariner -1 1301 3 2265 110 3 0 chr10 67896275 67896583 -72420182 - AluSc SINE Alu 0 309 1 2120 117 3 23 chr10 67896897 67897204 -72419561 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr10 67897999 67898021 -72418744 + AT_rich Low_complexity Low_complexity 1 22 0 258 290 16 0 chr10 67898070 67898132 -72418633 + MIR SINE MIR 3 65 -197 22 35 0 0 chr10 67898199 67898228 -72418537 + AT_rich Low_complexity Low_complexity 1 29 0 435 261 18 0 chr10 67898263 67898374 -72418391 - MIR SINE MIR -148 114 2 293 309 137 24 chr10 67898374 67898518 -72418247 - MIR SINE MIR -51 211 49 296 145 0 16 chr10 67898663 67898725 -72418040 + (TC)n Simple_repeat Simple_repeat 2 62 0 1671 179 3 33 chr10 67898734 67899041 -72417724 - AluJb SINE Alu -12 300 3 343 207 138 35 chr10 67899131 67899218 -72417547 - L2 LINE L2 -27 3245 3150 1331 168 5 0 chr10 67899371 67899579 -72417186 + AluJb SINE Alu 1 209 -103 4432 140 22 23 chr10 67899663 67899986 -72416779 + L1MA8 LINE L1 5505 5827 -464 1728 179 0 40 chr10 67899986 67900310 -72416455 + AluJb SINE Alu 2 312 0 4432 140 22 23 chr10 67900310 67900771 -72415994 + L1MA8 LINE L1 5827 6288 -3 21 71 0 0 chr10 67901041 67901083 -72415682 + AT_rich Low_complexity Low_complexity 1 42 0 24 85 0 0 chr10 67901673 67901732 -72415033 + AT_rich Low_complexity Low_complexity 1 59 0 25 0 0 0 chr10 67901827 67901852 -72414913 + AT_rich Low_complexity Low_complexity 1 25 0 1924 164 34 25 chr10 67901942 67902378 -72414387 + L1MC1 LINE L1 5176 5617 -716 * 5714 176 28 30 chr10 67902364 67904357 -72412408 + L1MA9 LINE L1 4092 6081 -231 538 170 38 0 chr10 67904359 67904465 -72412300 + L1MA9 LINE L1 6180 6289 -23 21 57 0 0 chr10 67904466 67904501 -72412264 + AT_rich Low_complexity Low_complexity 1 35 0 5153 99 56 4 chr10 67904523 67905323 -72411442 - L1PA13 LINE L1 -19 6144 5303 4149 127 42 19 chr10 67905329 67906051 -72410714 + L1MC1 LINE L1 5596 6333 0 381 306 34 29 chr10 67906121 67906330 -72410435 + L1MC4 LINE L1 6790 6999 -1043 213 353 98 23 chr10 67906494 67906627 -72410138 + MIR SINE MIR 28 170 -92 719 210 92 26 chr10 67909130 67909325 -72407440 + MER3 DNA MER1_type 2 209 0 259 233 38 43 chr10 67910134 67910326 -72406439 + GA-rich Low_complexity Low_complexity 1 190 0 2079 114 0 0 chr10 67910504 67910812 -72405953 - AluY SINE Alu 0 311 17 306 0 0 0 chr10 67912626 67912666 -72404099 - L1PA4 LINE L1 -3 6152 6113 441 301 141 0 chr10 67912962 67913118 -72403647 - MER45A DNA AcHobo 0 178 1 22 88 0 0 chr10 67913719 67913776 -72402989 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr10 67913966 67913987 -72402778 + AT_rich Low_complexity Low_complexity 1 21 0 2436 118 22 0 chr10 67914283 67914638 -72402127 + THE1B LTR MaLR 1 363 -1 462 100 14 0 chr10 67915090 67915160 -72401605 - LTR8A LTR ERV1 -386 341 271 2361 123 71 17 chr10 67915332 67915738 -72401027 + MSTA LTR MaLR 1 428 0 2942 114 29 23 chr10 67915823 67916454 -72400311 - LTR8A LTR ERV1 -3 724 1 3358 157 63 32 chr10 67916912 67917598 -72399167 + MER67C LTR ERV1 2 708 -2 223 337 0 10 chr10 67917661 67917762 -72399003 + GA-rich Low_complexity Low_complexity 4 103 0 2126 111 0 0 chr10 67918023 67918311 -72398454 + AluSq SINE Alu 16 303 -10 1004 191 113 44 chr10 67918388 67918681 -72398084 - Charlie4a DNA MER1_type -195 313 1 325 303 97 40 chr10 67918962 67919137 -72397628 - MER5A DNA MER1_type -1 188 4 2267 85 0 30 chr10 67919252 67919557 -72397208 + AluSg1 SINE Alu 1 296 -13 329 330 87 35 chr10 67919580 67919810 -72396955 + L1MEd LINE L1 911 1152 -4967 332 245 56 21 chr10 67920014 67920157 -72396608 + L1MEd LINE L1 2272 2419 -3710 1998 124 4 0 chr10 67920206 67920504 -72396261 - AluSx SINE Alu 0 305 7 401 291 97 81 chr10 67920507 67921187 -72395578 + L1MEd LINE L1 2441 3137 -2992 2103 136 0 0 chr10 67921187 67921489 -72395276 + AluY SINE Alu 1 302 -9 401 291 97 81 chr10 67921489 67921602 -72395163 + L1MEd LINE L1 3137 3247 -2882 647 153 63 0 chr10 67921637 67921748 -72395017 - L1MA7 LINE L1 -26 6265 6148 28 0 0 0 chr10 67921905 67921933 -72394832 + AT_rich Low_complexity Low_complexity 1 28 0 319 329 47 27 chr10 67922705 67922854 -72393911 - L2 LINE L2 0 3313 3162 269 365 0 24 chr10 67922919 67923045 -72393720 + MIR SINE MIR 20 142 -66 352 286 29 21 chr10 67923539 67923679 -72393086 - L1ME3A LINE L1 -219 5934 5794 1865 273 100 41 chr10 67923701 67924133 -72392632 - L1ME3A LINE L1 -2077 4052 3647 180 0 0 0 chr10 67924133 67924153 -72392612 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1865 273 100 41 chr10 67924153 67925032 -72391733 - L1ME3A LINE L1 -2482 3647 2664 904 290 125 44 chr10 67925090 67926833 -72389932 - L1MEd LINE L1 -913 1577 430 183 42 0 0 chr10 67927683 67927707 -72389058 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 327 288 0 0 chr10 67927708 67927774 -72388991 - L2 LINE L2 -17 3296 3231 2282 144 3 0 chr10 67928974 67929334 -72387431 + MER46B DNA MER2_type 1 236 0 403 174 0 93 chr10 67929402 67929488 -72387277 + Tigger5 DNA MER2_type 1 78 -2245 443 241 71 57 chr10 67929508 67929720 -72387045 + LTR16A LTR ERVL 143 357 -93 1197 274 89 50 chr10 67929790 67930272 -72386493 + L2 LINE L2 2462 2962 -352 181 265 299 8 chr10 67930359 67930476 -72386289 + L2 LINE L2 3163 3313 0 562 290 59 65 chr10 67931542 67931832 -72384933 - L2 LINE L2 -4 3309 3022 2269 237 34 7 chr10 67931923 67932480 -72384285 + L1MD3 LINE L1 7424 7995 0 408 356 40 5 chr10 67932514 67932716 -72384049 - MIR SINE MIR -53 209 1 2039 104 0 0 chr10 67932733 67933002 -72383763 - AluY SINE Alu -8 303 35 270 296 80 48 chr10 67933493 67933618 -72383147 + MIR SINE MIR 46 174 -88 187 356 0 17 chr10 67934916 67934975 -72381790 - L2 LINE L2 -22 3250 3193 2713 149 16 16 chr10 67935096 67935585 -72381180 - L1MA9 LINE L1 0 6312 5824 14159 205 54 10 chr10 67935633 67938248 -72378517 + L1PBa LINE L1 129 2627 -4235 2353 95 3 0 chr10 67938248 67938554 -72378211 - AluSp SINE Alu -6 307 1 14159 205 54 10 chr10 67938554 67939496 -72377269 + L1PBa LINE L1 2627 3526 -3336 2265 106 7 0 chr10 67939496 67939797 -72376968 + AluSq SINE Alu 1 303 -10 14159 205 54 10 chr10 67939797 67940890 -72375875 + L1PBa LINE L1 3526 4569 -2293 189 0 0 0 chr10 67940890 67940911 -72375854 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 14159 205 54 10 chr10 67940911 67941849 -72374916 + L1PBa LINE L1 4569 6103 -759 * 41942 37 25 2 chr10 67941829 67947845 -72368920 + L1PA3 LINE L1 5 6155 0 24 0 0 0 chr10 67947836 67947860 -72368905 + AT_rich Low_complexity Low_complexity 1 24 0 * 5174 118 5 9 chr10 67947860 67948293 -72368472 + L1PB1 LINE L1 5352 5782 -369 447 19 0 0 chr10 67948293 67948345 -72368420 + (TA)n Simple_repeat Simple_repeat 1 52 0 5174 118 5 9 chr10 67948345 67948707 -72368058 + L1PB1 LINE L1 5782 6144 -7 28 0 0 0 chr10 67948707 67948735 -72368030 + AT_rich Low_complexity Low_complexity 1 28 0 431 335 124 31 chr10 67948956 67949439 -72367326 - L2 LINE L2 -588 2726 2199 31 26 0 0 chr10 67949610 67949648 -72367117 + AT_rich Low_complexity Low_complexity 1 38 0 261 394 61 0 chr10 67949957 67950089 -72366676 + L2 LINE L2 3123 3262 -10 854 230 0 31 chr10 67950303 67950499 -72366266 + L1ME3A LINE L1 5554 5743 -427 1110 221 28 21 chr10 67950545 67950830 -72365935 + L1ME3A LINE L1 5879 6165 -5 21 0 0 0 chr10 67951655 67951676 -72365089 + AT_rich Low_complexity Low_complexity 1 21 0 2136 119 7 7 chr10 67952309 67952604 -72364161 + AluSx SINE Alu 1 295 -17 244 227 195 47 chr10 67953998 67954126 -72362639 + MIR SINE MIR 51 197 -65 300 334 140 40 chr10 67954634 67955139 -72361626 + L2 LINE L2 2664 3231 -41 972 263 92 24 chr10 67955960 67956608 -72360157 + L2 LINE L2 2309 3215 -98 2268 91 10 7 chr10 67956747 67957045 -72359720 + AluSc SINE Alu 1 299 -10 4243 204 27 78 chr10 67958200 67958910 -72357855 + L1MB7 LINE L1 4016 4761 -1385 463 90 0 70 chr10 67958910 67959010 -72357755 + L1MA4 LINE L1 6201 6293 -7 4243 204 27 78 chr10 67959010 67959210 -72357555 + L1MB7 LINE L1 4761 4970 -1176 1553 174 6 55 chr10 67959210 67959521 -72357244 + AluJb SINE Alu 1 296 -16 4243 204 27 78 chr10 67959521 67959576 -72357189 + L1MB7 LINE L1 4970 5026 -1120 1653 172 3 41 chr10 67959576 67959896 -72356869 - AluJb SINE Alu -1 311 4 4243 204 27 78 chr10 67959896 67960002 -72356763 + L1MB7 LINE L1 5026 5136 -1010 1038 31 78 0 chr10 67960002 67960131 -72356634 - MER85 DNA T2_type 0 139 1 4243 204 27 78 chr10 67960131 67960476 -72356289 + L1MB7 LINE L1 5136 5362 -784 1116 210 126 29 chr10 67960476 67960620 -72356145 + MER2 DNA MER2_type 1 130 -215 2753 168 122 7 chr10 67960620 67961162 -72355603 - MER6A DNA MER2_type -1 604 1 1116 210 126 29 chr10 67961162 67961267 -72355498 + MER2 DNA MER2_type 130 223 -122 1135 193 41 58 chr10 67961267 67961393 -72355372 - MER8 DNA MER2_type 0 239 117 2338 92 0 0 chr10 67961393 67961686 -72355079 - AluY SINE Alu -18 293 1 1135 193 41 58 chr10 67961686 67961802 -72354963 - MER8 DNA MER2_type -122 117 1 1116 210 126 29 chr10 67961802 67961861 -72354904 + MER2 DNA MER2_type 223 340 -5 4090 180 21 15 chr10 67961866 67962676 -72354089 + L1MB7 LINE L1 5361 6175 -9 2013 131 0 26 chr10 67963103 67963408 -72353357 + AluSq SINE Alu 5 301 -12 2237 113 8 38 chr10 67963484 67963857 -72352908 - Tigger7 DNA MER2_type 0 2587 2226 4143 173 29 6 chr10 67963862 67964592 -72352173 - Tigger7 DNA MER2_type -1717 770 24 284 280 108 32 chr10 67965567 67965724 -72351041 - MIR SINE MIR -91 171 3 1804 172 42 3 chr10 67965766 67966098 -72350667 + MER7A DNA MER2_type 4 346 0 2164 102 3 10 chr10 67966185 67966513 -72350252 + AluSp SINE Alu 1 313 0 628 318 82 9 chr10 67966677 67966897 -72349868 - MIR SINE MIR -21 241 6 22 0 0 0 chr10 67968085 67968107 -72348658 + AT_rich Low_complexity Low_complexity 1 22 0 247 286 61 20 chr10 67969143 67969241 -72347524 - L2 LINE L2 -2 3270 3169 2071 128 0 0 chr10 67969310 67969615 -72347150 - AluSx SINE Alu 0 305 1 208 325 0 0 chr10 67970377 67970457 -72346308 + GA-rich Low_complexity Low_complexity 3 82 0 992 152 86 43 chr10 67971624 67971834 -72344931 - MER20 DNA MER1_type 0 219 1 210 264 64 0 chr10 67971849 67971916 -72344849 - MIR SINE MIR -58 150 79 231 307 0 40 chr10 67972343 67972493 -72344272 + C-rich Low_complexity Low_complexity 6 149 0 523 242 159 6 chr10 67973832 67974014 -72342751 + MER2 DNA MER2_type 135 344 -1 2409 96 0 0 chr10 67975547 67975859 -72340906 - AluSp SINE Alu 0 313 2 189 254 149 0 chr10 67976815 67976882 -72339883 - MIR SINE MIR -2 260 184 22 35 0 0 chr10 67978930 67978959 -72337806 + AT_rich Low_complexity Low_complexity 1 29 0 269 321 175 21 chr10 67978975 67979203 -72337562 - MIR SINE MIR 0 262 4 421 227 270 5 chr10 67979234 67979419 -72337346 - MIR SINE MIR 0 262 29 740 291 69 48 chr10 67980545 67981108 -72335657 + HAL1 LINE L1 486 1060 -1447 1425 158 10 10 chr10 67981544 67981835 -72334930 + L1MA7 LINE L1 5999 6289 -2 298 215 13 13 chr10 67981848 67981927 -72334838 + MLT1I LTR MaLR 324 402 -7 988 279 69 24 chr10 67981988 67982242 -72334523 + HAL1 LINE L1 1994 2235 -272 2049 80 0 8 chr10 67982242 67982504 -72334261 - AluY SINE Alu -14 297 38 988 279 69 24 chr10 67982504 67982741 -72334024 + HAL1 LINE L1 2235 2507 0 29 28 0 0 chr10 67982868 67982904 -72333861 + AT_rich Low_complexity Low_complexity 1 36 0 1329 199 30 14 chr10 67983059 67983180 -72333585 + AluJo SINE Alu 1 118 -194 453 19 0 0 chr10 67983180 67983234 -72333531 + (TTAAA)n Simple_repeat Simple_repeat 3 56 0 1329 199 30 14 chr10 67983234 67983408 -72333357 + AluJo SINE Alu 118 301 -11 2209 130 19 26 chr10 67986063 67986441 -72330324 + THE1C LTR MaLR 1 375 0 1957 166 0 3 chr10 67987145 67987453 -72329312 + AluJo SINE Alu 1 307 -5 402 338 64 10 chr10 67987895 67988099 -72328666 + MIR SINE MIR 3 217 -45 1800 252 107 17 chr10 67988122 67988903 -72327862 + L1ME2 LINE L1 5263 6130 -34 371 297 37 68 chr10 67989077 67989421 -72327344 + L1M4 LINE L1 2255 2575 -3571 1648 197 3 3 chr10 67989421 67989716 -72327049 + AluJo SINE Alu 1 295 -17 371 297 37 68 chr10 67989716 67989960 -72326805 + L1M4 LINE L1 2575 2825 -3321 755 290 8 35 chr10 67989974 67990229 -72326536 - MIR SINE MIR 0 262 15 239 377 37 19 chr10 67990634 67990849 -72325916 - L3 LINE CR1 -336 1241 1023 443 293 66 23 chr10 67991258 67991517 -72325248 + L1ME4a LINE L1 5636 5905 -216 637 257 6 12 chr10 67991520 67991691 -72325074 + L1MC5 LINE L1 7727 7896 -65 22 70 0 0 chr10 67991750 67991793 -72324972 + AT_rich Low_complexity Low_complexity 1 43 0 4308 118 3 2 chr10 67992365 67992999 -72323766 + MER41B LTR ERV1 1 635 0 5565 80 17 3 chr10 67993091 67993846 -72322919 - MER4E LTR ERV1 0 766 1 2847 107 49 9 chr10 67994177 67994624 -72322141 - MER4C LTR ERV1 0 465 1 182 256 179 26 chr10 67994635 67994713 -72322052 - MIR3 SINE MIR -112 96 7 919 249 31 81 chr10 67994903 67995260 -72321505 + LTR29 LTR ERV1 1 339 -283 1906 149 44 20 chr10 67995260 67995603 -72321162 - MER61C LTR ERV1 0 434 84 1045 159 31 44 chr10 67995619 67995846 -72320919 + LTR48 LTR ERV1 521 744 -43 21 0 0 0 chr10 67997000 67997021 -72319744 + AT_rich Low_complexity Low_complexity 1 21 0 208 299 45 0 chr10 67997089 67997156 -72319609 - L2 LINE L2 -8 3305 3236 226 202 45 22 chr10 67997364 67997453 -72319312 - L1M4 LINE L1 -1045 5599 5509 256 232 0 18 chr10 67997526 67997582 -72319183 - L1M4 LINE L1 -6208 334 280 2350 113 116 3 chr10 67997633 67998014 -72318751 + MER39B LTR ERV1 3 426 -227 4206 158 20 20 chr10 67998015 67998726 -72318039 + MER50 LTR ERV1 1 711 -23 1021 134 56 69 chr10 67998727 67998958 -72317807 + MER39B LTR ERV1 424 651 -2 1045 155 141 5 chr10 67998960 67999181 -72317584 - L1M4 LINE L1 -6235 411 15 344 316 105 37 chr10 67999242 67999672 -72317093 - MARNA DNA Mariner -22 564 106 1141 91 46 51 chr10 67999718 67999915 -72316850 + LTR23 LTR ERV1 1 196 -241 419 125 80 0 chr10 67999939 68000027 -72316738 + MER34C LTR ERV1 423 517 -68 283 125 18 36 chr10 68000100 68000156 -72316609 + MER34C LTR ERV1 531 585 0 258 214 143 31 chr10 68000162 68000260 -72316505 - MIR3 SINE MIR -22 186 78 201 340 0 0 chr10 68000278 68000331 -72316434 - L2 LINE L2 -10 3262 3210 818 290 17 8 chr10 68001208 68001446 -72315319 + MIR SINE MIR 22 261 -1 2198 123 0 0 chr10 68001934 68002235 -72314530 + AluSg SINE Alu 3 303 -7 801 178 7 0 chr10 68003714 68003849 -72312916 + FRAM SINE Alu 23 158 -18 321 252 116 20 chr10 68003946 68004093 -72312672 - Charlie7 DNA MER1_type -2451 161 1 286 282 92 30 chr10 68004211 68004342 -72312423 - MIR SINE MIR -37 225 87 419 63 16 0 chr10 68004620 68004683 -72312082 + (TGGA)n Simple_repeat Simple_repeat 2 65 0 1386 197 42 24 chr10 68004686 68004975 -72311790 - AluJo SINE Alu -13 299 6 737 287 45 8 chr10 68005356 68005600 -72311165 - MIR SINE MIR 0 262 10 502 289 84 48 chr10 68005887 68006136 -72310629 + MIR SINE MIR 1 258 -4 3573 144 58 14 chr10 68006669 68007295 -72309470 - MER39B LTR ERV1 0 653 1 3827 35 2 0 chr10 68008391 68008854 -72307911 - L1PA4 LINE L1 0 6155 5692 248 218 18 18 chr10 68009047 68009102 -72307663 + L2 LINE L2 3218 3272 0 2682 331 60 23 chr10 68011087 68011526 -72305239 - HERVL LTR ERVL -948 4706 4284 2407 93 0 0 chr10 68011526 68011837 -72304928 + AluSq SINE Alu 1 311 -2 2682 331 60 23 chr10 68011837 68012691 -72304074 - HERVL LTR ERVL -1370 4284 3366 1439 324 42 27 chr10 68013073 68013803 -72302962 - HERVL LTR ERVL -1844 3810 3093 1634 96 101 0 chr10 68013803 68014022 -72302743 - AluSc SINE Alu -19 290 50 1439 324 42 27 chr10 68014022 68014577 -72302188 - HERVL LTR ERVL -2561 3093 1912 276 256 23 12 chr10 68014766 68014852 -72301913 - HERVL LTR ERVL -3842 1643 1557 994 235 0 0 chr10 68014864 68015051 -72301714 + MER5A DNA MER1_type 2 188 -1 649 334 40 21 chr10 68015257 68015637 -72301128 - HERVL LTR ERVL -4322 1442 1056 27 62 0 0 chr10 68015799 68015847 -72300918 + AT_rich Low_complexity Low_complexity 1 48 0 228 125 0 0 chr10 68015847 68015887 -72300878 - L1MA9 LINE L1 -38 6274 6235 5015 109 22 30 chr10 68016162 68016561 -72300204 + L1MA8 LINE L1 5428 5829 -462 2307 43 0 4 chr10 68016561 68016837 -72299928 + AluY SINE Alu 1 275 -36 1091 15 8 0 chr10 68016840 68016973 -72299792 + (GAAA)n Simple_repeat Simple_repeat 3 136 0 5015 109 22 30 chr10 68016973 68017439 -72299326 + L1MA8 LINE L1 5831 6290 -1 885 311 64 25 chr10 68017693 68017809 -72298956 - LTR33 LTR ERVL -1 520 410 1038 205 5 5 chr10 68017809 68017994 -72298771 + MER5A DNA MER1_type 5 189 0 885 311 64 25 chr10 68017994 68018314 -72298451 - LTR33 LTR ERVL -111 410 67 258 343 141 55 chr10 68019541 68019868 -72296897 - L2 LINE L2 -14 3258 2904 2252 61 0 4 chr10 68019869 68020146 -72296619 + AluY SINE Alu 1 276 -35 910 19 0 0 chr10 68020146 68020252 -72296513 + L1HS LINE L1 6049 6154 -1 314 335 105 30 chr10 68020261 68020469 -72296296 - L2 LINE L2 -411 2903 2712 183 42 0 0 chr10 68020469 68020493 -72296272 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 314 335 105 30 chr10 68020493 68020657 -72296108 - L2 LINE L2 -602 2712 2503 340 364 110 26 chr10 68020717 68021099 -72295666 - L2 LINE L2 -1217 2097 1684 412 357 88 0 chr10 68021916 68022098 -72294667 + MIR SINE MIR 9 206 -56 243 79 0 0 chr10 68022341 68022379 -72294386 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2467 119 17 6 chr10 68023088 68023448 -72293317 + THE1B LTR MaLR 1 364 0 262 267 23 114 chr10 68023616 68023747 -72293018 - MIR3 SINE MIR -38 170 52 225 245 0 0 chr10 68024421 68024470 -72292295 + (TG)n Simple_repeat Simple_repeat 1 49 0 2444 103 11 29 chr10 68025399 68025779 -72290986 - THE1C LTR MaLR -2 373 1 879 212 38 21 chr10 68026289 68026517 -72290248 + L1ME1 LINE L1 5928 6161 -5 299 280 0 34 chr10 68026726 68026825 -72289940 + L2 LINE L2 878 974 -2340 243 61 0 0 chr10 68026825 68026858 -72289907 + (CA)n Simple_repeat Simple_repeat 1 33 0 299 280 0 34 chr10 68026858 68026876 -72289889 + L2 LINE L2 974 991 -2323 2228 115 0 0 chr10 68026955 68027251 -72289514 - AluSg SINE Alu -14 296 1 255 353 12 0 chr10 68027556 68027641 -72289124 + L2 LINE L2 3227 3312 -1 2118 61 15 0 chr10 68028059 68028346 -72288419 + AluY SINE Alu 25 315 0 271 393 102 10 chr10 68028422 68028618 -72288147 - L2 LINE L2 -548 2766 2553 22 35 0 0 chr10 68029339 68029368 -72287397 + AT_rich Low_complexity Low_complexity 1 29 0 845 252 259 8 chr10 68029763 68030156 -72286609 + L2 LINE L2 1883 2374 -940 424 310 78 28 chr10 68030431 68030715 -72286050 + HAL1b LINE L1 583 880 -468 995 206 101 16 chr10 68030945 68031261 -72285504 + HAL1b LINE L1 1000 1342 -6 237 167 0 0 chr10 68032037 68032091 -72284674 + T-rich Low_complexity Low_complexity 1 54 0 1729 42 0 0 chr10 68032094 68032308 -72284457 - L1PA4 LINE L1 -3 6152 5939 2202 92 3 3 chr10 68032308 68032602 -72284163 - AluSc SINE Alu -15 294 1 314 277 36 36 chr10 68033180 68033292 -72283473 + MIR3 SINE MIR 49 160 -48 727 300 99 43 chr10 68033377 68033733 -72283032 + L2 LINE L2 2773 3147 -166 2568 216 33 11 chr10 68033733 68034280 -72282485 + MER68 LTR ERV1 1 559 -3 227 265 0 0 chr10 68034312 68034361 -72282404 + L2 LINE L2 3265 3313 0 2171 131 0 0 chr10 68034490 68034795 -72281970 + AluSq SINE Alu 1 305 -8 932 298 51 47 chr10 68036495 68036965 -72279800 + L2 LINE L2 2148 2619 -695 21057 177 32 11 chr10 68037098 68043705 -72273060 - L1PA13 LINE L1 0 6814 1 1814 175 3 0 chr10 68043969 68044260 -72272505 + AluJb SINE Alu 1 292 -20 192 182 0 0 chr10 68044553 68044586 -72272179 - L2 LINE L2 -10 3303 3271 1009 301 63 35 chr10 68044642 68045100 -72271665 - MLT1J LTR MaLR -23 488 18 465 190 35 43 chr10 68045259 68045375 -72271390 + MIR SINE MIR 126 240 -22 355 275 130 14 chr10 68048549 68048687 -72268078 + MIR3 SINE MIR 10 163 -45 571 275 48 12 chr10 68048700 68048867 -72267898 + MER117 DNA MER1_type 18 190 -7 228 67 0 0 chr10 68049900 68049930 -72266835 + (CA)n Simple_repeat Simple_repeat 2 31 0 4580 142 66 5 chr10 68049930 68050698 -72266067 + MER6 DNA MER2_type 51 865 0 2330 168 55 25 chr10 68050718 68051189 -72265576 + Tigger1 DNA MER2_type 8 492 -1926 * 11167 120 13 9 chr10 68051173 68052885 -72263880 + Tigger1 DNA MER2_type 699 2417 -1 2511 142 28 21 chr10 68052962 68053385 -72263380 - MSTB LTR MaLR 0 426 1 6372 106 11 3 chr10 68055929 68056875 -72259890 - L1MA2 LINE L1 0 6304 5352 232 221 15 0 chr10 68056896 68056964 -72259801 - L1M4 LINE L1 -3806 2340 2272 2569 61 0 3 chr10 68056970 68057282 -72259483 - AluY SINE Alu 0 311 1 14785 157 21 16 chr10 68057282 68057763 -72259002 - L1 LINE L1 -955 6610 6133 183 100 0 0 chr10 68057763 68057793 -72258972 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14785 157 21 16 chr10 68057793 68057836 -72258929 - L1 LINE L1 -1432 6133 6092 2172 115 7 0 chr10 68057836 68058131 -72258634 - AluSx SINE Alu -15 297 1 14785 157 21 16 chr10 68058131 68058786 -72257979 - L1 LINE L1 -1473 6092 5442 340 77 31 0 chr10 68058786 68058851 -72257914 + (TTATA)n Simple_repeat Simple_repeat 1 67 0 14785 157 21 16 chr10 68058851 68061425 -72255340 - L1 LINE L1 -2123 5442 2837 1683 135 75 18 chr10 68061945 68062103 -72254662 - AluJb SINE Alu -15 297 149 180 0 0 0 chr10 68062103 68062123 -72254642 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1683 135 75 18 chr10 68062123 68062245 -72254520 - AluJb SINE Alu -163 149 1 368 260 0 62 chr10 68062345 68062441 -72254324 - L2 LINE L2 0 3272 3183 4984 163 33 10 chr10 68062897 68063278 -72253487 + L1MB1 LINE L1 4848 5219 -949 2337 178 17 7 chr10 68063278 68063700 -72253065 - MSTB LTR MaLR 0 426 1 4984 163 33 10 chr10 68063700 68064605 -72252160 + L1MB1 LINE L1 5219 6167 -1 401 255 81 20 chr10 68064983 68065132 -72251633 - MIR SINE MIR -101 161 4 27 29 0 0 chr10 68065447 68065481 -72251284 + AT_rich Low_complexity Low_complexity 1 34 0 2462 216 65 35 chr10 68065533 68065787 -72250978 + L1ME1 LINE L1 5439 5684 -482 201 74 0 0 chr10 68065787 68065814 -72250951 + (TA)n Simple_repeat Simple_repeat 2 28 0 2462 216 65 35 chr10 68065814 68066249 -72250516 + L1ME1 LINE L1 5684 6149 -17 23 0 0 0 chr10 68066399 68066422 -72250343 + AT_rich Low_complexity Low_complexity 1 23 0 406 324 55 14 chr10 68066852 68066997 -72249768 - L2 LINE L2 -5 3267 3117 431 379 6 0 chr10 68067933 68068094 -72248671 + MIR SINE MIR 29 190 -72 191 208 208 0 chr10 68068606 68068659 -72248106 + L2 LINE L2 3250 3313 0 394 248 38 8 chr10 68070015 68070148 -72246617 + Charlie7 DNA MER1_type 53 189 -2423 1851 153 3 17 chr10 68070509 68070809 -72245956 + AluSq SINE Alu 1 296 -17 4117 170 16 17 chr10 68071880 68072721 -72244044 - L1PB2 LINE L1 -2 6149 5310 4139 202 44 17 chr10 68072916 68073992 -72242773 - Tigger1 DNA MER2_type -86 2332 1228 206 105 53 35 chr10 68074432 68074471 -72242294 + T-rich Low_complexity Low_complexity 3 45 -15 1002 221 4 4 chr10 68074471 68074697 -72242068 - L1MB1 LINE L1 -7 6161 5936 206 105 53 35 chr10 68074697 68074714 -72242051 + T-rich Low_complexity Low_complexity 45 60 0 2096 185 28 11 chr10 68074719 68075156 -72241609 - L1PB3 LINE L1 -3 6151 5708 570 314 77 4 chr10 68076758 68076970 -72239795 - MIR SINE MIR -21 241 21 792 188 162 5 chr10 68077605 68077802 -72238963 + MSTA LTR MaLR 1 228 -200 3395 197 14 0 chr10 68078469 68079043 -72237722 + L1PA13 LINE L1 1 582 -6205 680 267 17 13 chr10 68079268 68079504 -72237261 + AluSg SINE Alu 44 280 -30 3772 204 55 21 chr10 68079551 68080446 -72236319 + L1MC3 LINE L1 6612 7542 -243 1946 210 0 3 chr10 68080446 68080812 -72235953 - MLT1A1 LTR MaLR 0 365 1 3772 204 55 21 chr10 68080812 68080870 -72235895 + L1MC3 LINE L1 7542 7597 -188 369 194 0 75 chr10 68081078 68081171 -72235594 - L2 LINE L2 -40 3273 3188 247 319 0 0 chr10 68081355 68081446 -72235319 + A-rich Low_complexity Low_complexity 1 91 0 660 154 8 16 chr10 68082146 68082269 -72234496 - MER50 LTR ERV1 -278 456 335 2464 265 48 24 chr10 68082271 68083308 -72233457 + L1M4 LINE L1 4330 5391 -755 691 135 0 0 chr10 68083551 68083647 -72233118 + LTR40a LTR ERVL 407 502 -17 967 106 7 13 chr10 68083648 68083799 -72232966 + L1PA15 LINE L1 6001 6150 -15 434 233 86 45 chr10 68083839 68084023 -72232742 + MLT1J2 LTR MaLR 260 409 0 3192 46 32 2 chr10 68084082 68084516 -72232249 - L1PA4 LINE L1 -3 6152 5706 1305 207 43 6 chr10 68085691 68086019 -72230746 - L1 LINE L1 -1489 5719 5380 5382 125 78 25 chr10 68086154 68087146 -72229619 + Tigger3b DNA MER2_type 187 1230 -1 240 285 0 41 chr10 68087738 68087861 -72228904 + CT-rich Low_complexity Low_complexity 3 120 0 22 0 0 0 chr10 68088674 68088696 -72228069 + AT_rich Low_complexity Low_complexity 1 22 0 2068 85 25 6 chr10 68088908 68089224 -72227541 - L1P LINE L1 -1454 4692 4371 5115 225 19 14 chr10 68089415 68090724 -72226041 + L1 LINE L1 2973 4288 -1858 4303 261 3 2 chr10 68090862 68091819 -72224946 - L1 LINE L1 -5705 1504 547 5147 236 30 50 chr10 68092690 68094035 -72222730 - ERVL LTR ERVL -1092 4672 3354 262 257 0 0 chr10 68094395 68094465 -72222300 + MIR SINE MIR 183 252 -10 1686 170 36 34 chr10 68095308 68095666 -72221099 + LTR19C LTR ERV1 1 359 -420 4510 275 29 28 chr10 68095773 68098753 -72218012 - L1PBb LINE L1 -2441 4408 1358 233 308 22 11 chr10 68098760 68098851 -72217914 - L1PBb LINE L1 -5285 1564 1473 230 256 61 0 chr10 68099074 68099156 -72217609 - HAL1 LINE L1 -1551 956 870 * 804 317 110 30 chr10 68099152 68099717 -72217048 - L1PBb LINE L1 -1871 1339 730 202 362 112 20 chr10 68099782 68099978 -72216787 + L2 LINE L2 1948 2161 -1153 287 327 64 0 chr10 68099998 68100108 -72216657 + MER5A DNA MER1_type 2 118 -71 2356 198 9 35 chr10 68100328 68100960 -72215805 - L1P LINE L1 -3253 2893 2278 * 4887 86 10 3 chr10 68100956 68101748 -72215017 + L1PA8A LINE L1 4689 5485 -646 1690 181 22 0 chr10 68101855 68102169 -72214596 - MER57A LTR ERV1 0 403 83 1719 135 159 73 chr10 68102169 68102539 -72214226 - MER4A LTR ERV1 0 664 263 619 117 0 48 chr10 68102539 68102642 -72214123 - MER4A LTR ERV1 -566 98 1 586 114 0 0 chr10 68102642 68102728 -72214037 - MER57A LTR ERV1 -317 86 1 2322 159 19 28 chr10 68102841 68103050 -72213715 + MER4B LTR ERV1 1 210 -400 327 65 0 0 chr10 68103050 68103096 -72213669 + (CAA)n Simple_repeat Simple_repeat 2 47 0 2322 159 19 28 chr10 68103096 68103352 -72213413 + MER4B LTR ERV1 210 462 -148 753 144 37 112 chr10 68103357 68103545 -72213220 - LTR39 LTR ERV1 -609 174 1 394 305 15 30 chr10 68103683 68103883 -72212882 - MIR SINE MIR 0 262 66 825 244 114 29 chr10 68104335 68104581 -72212184 - MSTD LTR MaLR -124 272 6 310 232 37 37 chr10 68105109 68105191 -72211574 + L2 LINE L2 3229 3310 -3 951 252 92 3 chr10 68105361 68105643 -72211122 - MER58B DNA MER1_type -34 307 1 5647 210 34 5 chr10 68106740 68106817 -72209948 + MSTA-int LTR MaLR 509 582 -1069 548 75 0 12 chr10 68106817 68106897 -72209868 + MADE1 DNA Mariner 1 79 -1 5647 210 34 5 chr10 68106897 68107929 -72208836 + MSTA-int LTR MaLR 582 1651 0 471 135 14 0 chr10 68107929 68108003 -72208762 + MSTA LTR MaLR 1 75 -353 3763 160 9 6 chr10 68108420 68109062 -72207703 - LTR5 LTR ERVK -325 644 1 247 342 61 18 chr10 68109135 68109249 -72207516 + MIR SINE MIR 23 141 -121 197 338 0 0 chr10 68110604 68110672 -72206093 - MIR SINE MIR -1 261 194 508 281 101 17 chr10 68110806 68110984 -72205781 + MIR SINE MIR 13 205 -57 3043 266 24 5 chr10 68111118 68112088 -72204677 + L1 LINE L1 2562 3549 -2597 4735 232 18 10 chr10 68112095 68113350 -72203415 + L1 LINE L1 3976 5240 -906 346 219 48 10 chr10 68113683 68113783 -72202982 + MER31-int LTR ERV1 1096 1180 -3691 297 247 0 11 chr10 68114085 68114174 -72202591 + MER31-int LTR ERV1 3354 3441 -2890 333 257 53 48 chr10 68114275 68114481 -72202284 + MER31-int LTR ERV1 1707 1913 -3023 26 0 0 0 chr10 68114504 68114530 -72202235 + AT_rich Low_complexity Low_complexity 1 26 0 253 253 38 51 chr10 68114551 68114709 -72202056 + MER31-int LTR ERV1 2780 2935 -2080 3059 133 10 12 chr10 68114803 68115301 -72201464 + MER31-int LTR ERV1 5104 5600 -1937 304 290 0 21 chr10 68115301 68115394 -72201371 + L1MC4 LINE L1 6613 6703 -1339 249 246 0 0 chr10 68115405 68115470 -72201295 + (TA)n Simple_repeat Simple_repeat 1 65 0 2608 111 54 9 chr10 68115512 68115955 -72200810 + MER57-int LTR ERV1 5620 6082 -1455 1879 181 23 25 chr10 68116405 68116802 -72199963 - MSTB1 LTR MaLR -32 400 5 2626 154 0 0 chr10 68116971 68117393 -72199372 + L1PA16 LINE L1 5583 6004 -162 8801 227 53 13 chr10 68117545 68120974 -72195791 - L1 LINE L1 -3396 4169 226 375 325 81 51 chr10 68121442 68121836 -72194929 + L2 LINE L2 2182 2587 -727 225 0 0 0 chr10 68121871 68121896 -72194869 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1329 231 40 0 chr10 68121899 68122213 -72194552 + AluJo SINE Alu 1 325 0 4359 226 26 36 chr10 68122214 68123422 -72193343 - L1MD3 LINE L1 -17 7978 6784 5334 182 47 41 chr10 68123527 68125225 -72191540 - L1PBb LINE L1 -3738 2465 748 376 111 16 16 chr10 68125363 68125426 -72191339 - THE1C LTR MaLR -312 63 1 7294 228 25 66 chr10 68125426 68127963 -72188802 - L1 LINE L1 -782 5364 2931 209 348 91 59 chr10 68128285 68128472 -72188293 - MER91A DNA MER1_type -1 195 3 * 379 332 50 50 chr10 68128472 68128751 -72188014 + L2 LINE L2 3035 3313 0 288 353 25 16 chr10 68129248 68129370 -72187395 + MIR3 SINE MIR 76 198 -10 213 344 17 61 chr10 68129766 68129946 -72186819 - L2 LINE L2 -487 2827 2656 21 71 0 0 chr10 68130039 68130081 -72186684 + AT_rich Low_complexity Low_complexity 1 42 0 8276 227 31 8 chr10 68130720 68132803 -72183962 - L1P LINE L1 -888 5258 3128 402 277 109 55 chr10 68133159 68133361 -72183404 + MLT1I LTR MaLR 197 409 0 21 71 0 0 chr10 68133508 68133550 -72183215 + AT_rich Low_complexity Low_complexity 1 42 0 246 289 6 45 chr10 68135194 68135350 -72181415 + CT-rich Low_complexity Low_complexity 2 151 0 22 0 0 0 chr10 68135490 68135512 -72181253 + AT_rich Low_complexity Low_complexity 1 22 0 642 315 48 66 chr10 68135675 68136174 -72180591 - MLT1J LTR MaLR -18 493 4 24 32 0 0 chr10 68136359 68136390 -72180375 + AT_rich Low_complexity Low_complexity 1 31 0 14277 23 0 2 chr10 68136451 68138165 -72178600 + L1P LINE L1 2709 4419 -1727 1529 221 12 53 chr10 68138430 68138860 -72177905 + L1PA16 LINE L1 5739 6150 -16 3111 214 18 18 chr10 68138882 68140181 -72176584 + L1MB1 LINE L1 4643 5946 -222 1191 322 35 37 chr10 68140249 68140957 -72175808 + L1PBa LINE L1 469 1175 -5688 281 408 35 13 chr10 68141579 68141807 -72174958 + L2 LINE L2 2569 2801 -513 1099 317 54 5 chr10 68141906 68142275 -72174490 - MLT1I LTR MaLR -2 407 21 699 197 0 0 chr10 68142406 68142538 -72174227 - FLAM_C SINE Alu -1 132 1 194 280 262 9 chr10 68142678 68142785 -72173980 + L2 LINE L2 3180 3313 0 280 277 34 95 chr10 68143252 68143400 -72173365 - MLT1I LTR MaLR -39 370 232 469 389 27 19 chr10 68143656 68143956 -72172809 - L2 LINE L2 -237 3076 2776 1061 316 78 17 chr10 68144248 68144723 -72172042 - MLT1H LTR MaLR -2 547 44 236 339 45 51 chr10 68144837 68145014 -72171751 - L2 LINE L2 -1004 2310 2135 279 305 12 0 chr10 68145148 68145230 -72171535 + L1ME LINE L1 3 85 -5985 5193 250 13 6 chr10 68145506 68146000 -72170765 - L1PA12 LINE L1 -3335 4249 3760 186 43 0 0 chr10 68146000 68146023 -72170742 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5193 250 13 6 chr10 68146023 68147016 -72169749 - L1PA12 LINE L1 -3824 3760 2762 420 251 69 10 chr10 68147206 68147530 -72169235 - L1MCa LINE L1 -4555 1940 1186 2958 164 88 35 chr10 68147539 68148221 -72168544 + LTR8A LTR ERV1 10 727 0 785 263 34 80 chr10 68148230 68148285 -72168480 - L1MCa LINE L1 -5076 969 913 959 236 117 89 chr10 68148285 68148824 -72167941 + MER41C LTR ERV1 1 554 0 785 263 34 80 chr10 68148824 68149205 -72167560 - L1MCa LINE L1 -5132 913 553 598 223 41 56 chr10 68149271 68149468 -72167297 - L1MCa LINE L1 -5469 576 383 1760 255 27 87 chr10 68149603 68150538 -72166227 - L1PA12 LINE L1 -5519 2062 25 2259 102 7 0 chr10 68150685 68150979 -72165786 - AluSx SINE Alu -16 296 1 248 323 130 25 chr10 68151051 68151380 -72165385 + L2 LINE L2 1314 1684 -1630 27 49 0 0 chr10 68152143 68152184 -72164581 + AT_rich Low_complexity Low_complexity 1 41 0 225 180 0 0 chr10 68152400 68152450 -72164315 + GA-rich Low_complexity Low_complexity 2 51 0 222 313 50 61 chr10 68153226 68153325 -72163440 + MER5A DNA MER1_type 64 161 -28 187 250 83 56 chr10 68153687 68153759 -72163006 + MER5A DNA MER1_type 43 116 -73 345 24 0 0 chr10 68153762 68153804 -72162961 + (CA)n Simple_repeat Simple_repeat 2 43 0 7448 212 11 25 chr10 68154699 68156886 -72159879 + L1PA13 LINE L1 1842 4014 -2783 3852 166 89 4 chr10 68156883 68158438 -72158327 + L1PA13 LINE L1 4852 6550 -264 * 1440 206 6 3 chr10 68158664 68158975 -72157790 + L1PA7 LINE L1 5828 6139 -15 261 185 0 0 chr10 68158990 68159044 -72157721 + MSTD LTR MaLR 343 396 0 5077 272 39 27 chr10 68159046 68160623 -72156142 + MSTD-int LTR MaLR 2 1596 -139 1646 191 10 10 chr10 68160632 68160920 -72155845 - AluJo SINE Alu -24 288 1 6903 33 1 1 chr10 68160934 68162435 -72154330 + L1PA3 LINE L1 4608 6107 -48 1593 249 68 6 chr10 68162628 68163250 -72153515 - L1 LINE L1 -2964 3006 2347 2087 282 72 40 chr10 68163272 68164250 -72152515 - L1 LINE L1 -4879 1012 4 2382 118 8 8 chr10 68164436 68164791 -72151974 - THE1A LTR MaLR 0 355 1 10483 108 34 17 chr10 68164791 68166344 -72150421 - THE1A-int LTR MaLR 0 1580 2 2104 150 8 11 chr10 68166344 68166696 -72150069 - THE1A LTR MaLR -2 353 1 2332 97 0 7 chr10 68167255 68167563 -72149202 + AluSx SINE Alu 1 306 -6 1339 139 205 30 chr10 68167832 68168169 -72148596 + MER4A LTR ERV1 2 397 -267 280 256 0 51 chr10 68168178 68168256 -72148509 - L2 LINE L2 -10 3303 3230 180 0 0 0 chr10 68168662 68168682 -72148083 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1728 134 0 18 chr10 68168684 68168964 -72147801 + MER4A LTR ERV1 388 463 -2 21 0 0 0 chr10 68168972 68168993 -72147772 + AT_rich Low_complexity Low_complexity 1 21 0 442 234 53 18 chr10 68169836 68170007 -72146758 + Charlie7 DNA MER1_type 548 724 -1888 2326 294 235 9 chr10 68170165 68171542 -72145223 + L2 LINE L2 4 1692 -1622 369 314 166 15 chr10 68171552 68171883 -72144882 + L1M4 LINE L1 4226 4606 -1540 1502 249 45 14 chr10 68172051 68172565 -72144200 + L1M4 LINE L1 4672 5201 -945 553 319 80 29 chr10 68172578 68172854 -72143911 + L1PA13 LINE L1 3 292 -6495 4577 226 44 21 chr10 68173307 68174754 -72142011 + L1PA13 LINE L1 1391 2942 -3855 2672 127 44 0 chr10 68174754 68175164 -72141601 - MSTA LTR MaLR 0 428 1 4577 226 44 21 chr10 68175164 68175301 -72141464 + L1PA13 LINE L1 2942 3074 -3723 10656 27 0 0 chr10 68175471 68177516 -72139249 + L1PA3 LINE L1 4108 6155 0 349 301 18 0 chr10 68177536 68177649 -72139116 + ERVL LTR ERVL 4156 4270 -1494 * 3104 252 51 35 chr10 68177639 68178703 -72138062 + ERVL LTR ERVL 4446 5526 -238 251 225 171 27 chr10 68180235 68180346 -72136419 - MIR SINE MIR -73 189 63 21 82 0 0 chr10 68180403 68180452 -72136313 + AT_rich Low_complexity Low_complexity 1 49 0 2016 150 92 31 chr10 68180910 68181138 -72135627 - Tigger2 DNA MER2_type 0 2718 2505 2520 77 44 11 chr10 68181138 68181501 -72135264 + THE1C LTR MaLR 1 375 0 10401 100 34 37 chr10 68181501 68183086 -72133679 + THE1C-int LTR MaLR 1 1580 0 2726 84 5 16 chr10 68183086 68183465 -72133300 + THE1C LTR MaLR 1 375 0 2016 150 92 31 chr10 68183465 68183648 -72133117 - Tigger2 DNA MER2_type -212 2506 2280 370 155 0 0 chr10 68183656 68183714 -72133051 - Tigger2 DNA MER2_type -2659 59 2 1788 36 0 5 chr10 68184369 68184590 -72132175 - L1PA4 LINE L1 -4 6151 5932 532 216 31 42 chr10 68185519 68185729 -72131036 + MLT1A1 LTR MaLR 131 429 -28 233 414 19 6 chr10 68185838 68186000 -72130765 + L1PA16 LINE L1 867 1030 -6544 1999 279 21 13 chr10 68186160 68186865 -72129900 + L1PA16 LINE L1 2182 2892 -4689 1450 207 7 7 chr10 68186877 68187162 -72129603 + L1PA12 LINE L1 7 291 -7290 16201 203 20 20 chr10 68187295 68190539 -72126226 + L1PA12 LINE L1 239 4299 -3285 2248 150 13 11 chr10 68190539 68190912 -72125853 + THE1C LTR MaLR 1 374 -1 16201 203 20 20 chr10 68190912 68192567 -72124198 + L1PA12 LINE L1 4299 5953 -1631 6322 94 8 9 chr10 68192567 68194385 -72122380 + L1PA11 LINE L1 4341 6164 -10 5037 111 7 1 chr10 68194402 68195152 -72121613 + L1PA11 LINE L1 5413 6166 -8 5118 123 21 49 chr10 68195365 68195765 -72121000 + L1PA12 LINE L1 6518 6928 -678 189 0 0 0 chr10 68195765 68195786 -72120979 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5118 123 21 49 chr10 68195786 68196498 -72120267 + L1PA12 LINE L1 6928 7604 -2 3529 154 45 60 chr10 68196508 68197312 -72119453 + L1MA8 LINE L1 5495 6286 -5 21 36 0 0 chr10 68198144 68198172 -72118593 + AT_rich Low_complexity Low_complexity 1 28 0 12094 210 27 49 chr10 68198268 68202297 -72114468 + L1PA16 LINE L1 2858 6759 -845 2620 40 0 3 chr10 68202297 68202603 -72114162 + AluY SINE Alu 3 305 -6 12094 210 27 49 chr10 68202603 68203422 -72113343 + L1PA16 LINE L1 6759 7595 -9 235 236 0 45 chr10 68203624 68203713 -72113052 + (TTAAA)n Simple_repeat Simple_repeat 3 87 0 22 35 0 0 chr10 68203742 68203771 -72112994 + AT_rich Low_complexity Low_complexity 1 29 0 1223 132 9 14 chr10 68203847 68204059 -72112706 + L1MB7 LINE L1 5662 5872 -312 3264 169 57 46 chr10 68204212 68204968 -72111797 + L1MA8 LINE L1 5526 6289 -2 211 308 0 0 chr10 68205126 68205178 -72111587 + MER5A DNA MER1_type 137 188 -1 23 54 0 0 chr10 68205207 68205244 -72111521 + AT_rich Low_complexity Low_complexity 1 37 0 914 170 46 21 chr10 68205325 68205519 -72111246 - L1PA16 LINE L1 0 6166 5968 1925 98 19 0 chr10 68205832 68206088 -72110677 - AluSg SINE Alu -17 293 33 24 85 0 0 chr10 68206251 68206310 -72110455 + AT_rich Low_complexity Low_complexity 1 59 0 789 233 68 32 chr10 68206352 68206608 -72110157 + MIR SINE MIR 9 262 0 202 185 19 19 chr10 68206642 68206696 -72110069 + (TTA)n Simple_repeat Simple_repeat 3 56 0 226 238 0 0 chr10 68207810 68207873 -72108892 + L1MC4a LINE L1 6555 6617 -1191 1362 174 228 24 chr10 68207897 68208363 -72108402 + L1MC4 LINE L1 7377 7937 -105 783 129 150 0 chr10 68208867 68209007 -72107758 + MSTA LTR MaLR 268 428 0 266 309 12 12 chr10 68209546 68209630 -72107135 + MLT1K LTR MaLR 322 405 -183 315 197 33 0 chr10 68209903 68209964 -72106801 + L2 LINE L2 3250 3312 -1 518 243 85 32 chr10 68210817 68211006 -72105759 + L2 LINE L2 3115 3313 0 208 198 380 8 chr10 68211326 68211447 -72105318 - L2 LINE L2 -1 3312 3147 2815 41 0 0 chr10 68212607 68212945 -72103820 + L1PA6 LINE L1 5817 6154 0 23 0 0 0 chr10 68213154 68213177 -72103588 + AT_rich Low_complexity Low_complexity 1 23 0 2809 89 56 21 chr10 68214714 68215143 -72101622 + MLT2A1 LTR ERVL 1 444 0 411 320 13 39 chr10 68216401 68216554 -72100211 + MIR3 SINE MIR 31 179 -29 199 176 0 0 chr10 68216524 68216558 -72100207 + L3 LINE CR1 1523 1556 -21 * 274 302 121 0 chr10 68216754 68216870 -72099895 - L2 LINE L2 0 3313 3184 321 47 0 0 chr10 68216947 68216990 -72099775 + (CA)n Simple_repeat Simple_repeat 2 44 0 565 253 184 16 chr10 68217497 68217687 -72099078 - MIR SINE MIR -26 236 15 262 311 132 12 chr10 68217966 68218133 -72098632 + L2 LINE L2 2317 2503 -811 867 189 41 8 chr10 68218154 68218397 -72098368 + L1M4 LINE L1 2914 3164 -2982 1360 210 106 82 chr10 68218459 68218950 -72097815 - MLT1D LTR MaLR -2 503 1 521 236 102 0 chr10 68218954 68219111 -72097654 - L1M4 LINE L1 -2428 3718 3546 2808 146 24 0 chr10 68219111 68219563 -72097202 - Tigger1 DNA MER2_type -1803 615 153 774 139 0 0 chr10 68219680 68219795 -72096970 - Tigger1 DNA MER2_type -2303 115 1 185 191 0 21 chr10 68219919 68219966 -72096799 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 612 259 44 48 chr10 68220368 68220596 -72096169 + MIR SINE MIR 20 246 -16 318 314 36 58 chr10 68220911 68221048 -72095717 - MIR3 SINE MIR -10 198 65 6414 166 7 1 chr10 68221532 68223682 -72093083 + L1PB1 LINE L1 3980 6142 -9 35 0 0 0 chr10 68223709 68223744 -72093021 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 68224126 68224158 -72092607 + AT_rich Low_complexity Low_complexity 1 32 0 369 310 43 9 chr10 68224478 68224594 -72092171 + L2 LINE L2 3189 3308 -5 20861 158 34 30 chr10 68224677 68225454 -72091311 + L1M1 LINE L1 9 782 -6783 2557 138 16 19 chr10 68225454 68225883 -72090882 - MSTA LTR MaLR 0 428 1 20861 158 34 30 chr10 68225883 68229004 -72087761 + L1M1 LINE L1 782 3933 -3632 7653 32 0 0 chr10 68229004 68230178 -72086587 - L1PA3 LINE L1 0 6155 4982 20861 158 34 30 chr10 68230178 68231367 -72085398 + L1M1 LINE L1 3933 5116 -2449 1195 145 102 14 chr10 68231364 68231647 -72085118 + L1M1 LINE L1 3355 3662 -3903 * 986 144 6 56 chr10 68231689 68231869 -72084896 - MSTD LTR MaLR -225 171 1 208 248 331 30 chr10 68232041 68232174 -72084591 + L2 LINE L2 3124 3296 -17 195 254 0 85 chr10 68232278 68232337 -72084428 - L2 LINE L2 -86 3186 3133 210 342 26 0 chr10 68232379 68232455 -72084310 + L2 LINE L2 200 277 -3037 886 287 82 33 chr10 68232528 68232711 -72084054 + L2 LINE L2 2644 2817 -496 3507 148 63 6 chr10 68232711 68233033 -72083732 + MER67C LTR ERV1 1 303 -407 2459 69 0 0 chr10 68233033 68233339 -72083426 + AluY SINE Alu 1 306 -5 3507 148 63 6 chr10 68233339 68233686 -72083079 + MER67C LTR ERV1 303 708 -2 886 287 82 33 chr10 68233686 68234120 -72082645 + L2 LINE L2 2817 3313 0 321 222 22 0 chr10 68234504 68234594 -72082171 + L1ME1 LINE L1 4568 4659 -1487 180 0 0 0 chr10 68234756 68234776 -72081989 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 8824 223 23 11 chr10 68235157 68237574 -72079191 + L1 LINE L1 2352 4796 -1350 8094 68 34 0 chr10 68237560 68238671 -72078094 + L1PA6 LINE L1 3089 4148 -2006 * 8094 70 23 2 chr10 68238671 68240526 -72076239 + L1PA6 LINE L1 4280 6154 0 1741 105 4 0 chr10 68240574 68240812 -72075953 + AluSq SINE Alu 61 299 -14 4651 165 48 54 chr10 68240812 68241032 -72075733 + L1PA16 LINE L1 4790 5010 -1156 248 139 47 0 chr10 68241032 68241075 -72075690 + MLT1A2 LTR MaLR 284 328 -46 4651 165 48 54 chr10 68241075 68242201 -72074564 + L1PA16 LINE L1 5010 6154 -12 3175 223 57 26 chr10 68242236 68243161 -72073604 + L1ME1 LINE L1 5193 6125 -41 408 264 0 0 chr10 68243169 68243256 -72073509 + FLAM_A SINE Alu 34 120 -22 1531 264 86 47 chr10 68243338 68244184 -72072581 + L1MC4a LINE L1 4797 5186 -960 276 100 0 0 chr10 68244184 68244224 -72072541 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1531 264 86 47 chr10 68244224 68244392 -72072373 + L1MC4a LINE L1 5186 5346 -800 2714 20 0 0 chr10 68245016 68245321 -72071444 - AluYa5 SINE Alu -6 305 1 5382 44 3 1 chr10 68245388 68246047 -72070718 - L1PA5 LINE L1 -3 6151 5492 408 305 52 52 chr10 68246048 68246435 -72070330 + L1MC4a LINE L1 5511 5897 -1911 4089 130 15 5 chr10 68246675 68247337 -72069428 + L1PA16 LINE L1 5489 6157 -9 7133 34 5 0 chr10 68247378 68248557 -72068208 - L1PA2 LINE L1 0 6155 4986 9796 43 2 1 chr10 68248557 68249781 -72066984 + L1P LINE L1 1407 2632 -3514 390 253 67 11 chr10 68249804 68249982 -72066783 + L1MC4a LINE L1 5852 6039 -1769 298 215 17 134 chr10 68250033 68250205 -72066560 + L2 LINE L2 3152 3303 -10 1312 202 0 0 chr10 68250278 68250501 -72066264 - MER58A DNA MER1_type -1 223 1 189 107 0 0 chr10 68250592 68250620 -72066145 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 424 117 0 0 chr10 68250769 68250846 -72065919 - L1MA3 LINE L1 0 6305 6229 429 304 22 22 chr10 68250846 68250981 -72065784 - L2 LINE L2 -273 3040 2906 310 246 43 14 chr10 68251282 68251351 -72065414 + MIR SINE MIR 20 90 -118 485 188 227 58 chr10 68251408 68251485 -72065280 + MER20 DNA MER1_type 40 103 -116 1957 115 34 24 chr10 68251485 68251780 -72064985 + AluSx SINE Alu 1 298 -14 485 188 227 58 chr10 68251780 68251856 -72064909 + MER20 DNA MER1_type 103 219 0 1734 201 21 5 chr10 68252010 68252339 -72064426 + MLT1A1 LTR MaLR 25 365 0 1687 134 11 11 chr10 68253802 68254086 -72062679 - L1MA5A LINE L1 -6 6291 6008 713 138 18 0 chr10 68254086 68254195 -72062570 - FRAM SINE Alu -55 121 11 530 115 42 0 chr10 68254206 68254302 -72062463 - L1MA5A LINE L1 -244 6053 5954 1278 192 8 96 chr10 68254399 68254784 -72061981 - L1MD3 LINE L1 0 7995 7645 947 87 17 87 chr10 68254790 68254963 -72061802 - L1MA5A LINE L1 -366 5931 5771 318 313 106 40 chr10 68255386 68255584 -72061181 + MIR SINE MIR 6 216 -46 2803 13 0 0 chr10 68255901 68256208 -72060557 + AluYa5 SINE Alu 1 307 -4 203 267 200 0 chr10 68257420 68257480 -72059285 - MIR SINE MIR -70 138 67 1969 192 70 8 chr10 68258803 68259204 -72057561 - MSTB LTR MaLR 0 426 1 461 306 121 10 chr10 68259460 68259666 -72057099 - MIR SINE MIR -22 240 12 31446 53 38 3 chr10 68263118 68267289 -72049476 + L1P LINE L1 1 4318 -1828 3992 217 25 13 chr10 68317390 68318335 -71998430 - L1P LINE L1 -1065 5081 4125 4266 204 48 16 chr10 68318519 68319551 -71997214 + L1P LINE L1 1491 2554 -3592 336 314 45 41 chr10 68320221 68320441 -71996324 - MIR SINE MIR -32 230 10 1271 106 0 21 chr10 68320521 68320709 -71996056 + AluSx SINE Alu 5 188 -124 459 258 0 0 chr10 68321400 68321555 -71995210 + (TCCA)n Simple_repeat Simple_repeat 2 156 0 238 254 98 49 chr10 68321555 68321677 -71995088 - L2 LINE L2 0 3272 3145 395 216 186 0 chr10 68321898 68322000 -71994765 - MIR SINE MIR -121 141 21 195 250 33 0 chr10 68322041 68322101 -71994664 + L2 LINE L2 3227 3288 -25 471 326 21 0 chr10 68322323 68322464 -71994301 - MIR SINE MIR -46 216 73 350 257 224 7 chr10 68323037 68323189 -71993576 + MIR SINE MIR 56 240 -22 437 136 0 12 chr10 68324525 68324606 -71992159 + (TCCC)n Simple_repeat Simple_repeat 1 80 0 353 286 8 0 chr10 68325055 68325174 -71991591 - HAL1 LINE L1 -147 2360 2241 2319 99 0 0 chr10 68325413 68325716 -71991049 - AluSx SINE Alu -9 303 1 12379 55 0 1 chr10 68326936 68328494 -71988271 + L1P LINE L1 1197 2752 -3394 560 184 19 107 chr10 68328627 68328833 -71987932 + L1 LINE L1 5158 5345 -801 2249 96 3 3 chr10 68328833 68329126 -71987639 - AluSq SINE Alu -17 296 4 9240 102 8 8 chr10 68329146 68331225 -71985540 - L1PA6 LINE L1 0 6154 4076 189 74 0 0 chr10 68332044 68332071 -71984694 + (G)n Simple_repeat Simple_repeat 1 27 0 5977 33 37 1 chr10 68332089 68333025 -71983740 - L1PA4 LINE L1 -142 6013 5045 307 179 0 0 chr10 68333043 68333099 -71983666 + L1MC4 LINE L1 6648 6703 -1339 2233 107 18 0 chr10 68333113 68333439 -71983326 - L1P5 LINE L1 -364 5792 5461 570 157 17 0 chr10 68333479 68333594 -71983171 - L1 LINE L1 -1439 4707 4591 232 218 18 0 chr10 68333739 68333794 -71982971 - L1P5 LINE L1 -315 5836 5781 11398 151 14 120 chr10 68333802 68335088 -71981677 - L1P3 LINE L1 -2973 3488 2066 958 93 78 0 chr10 68335088 68335217 -71981548 + MER85 DNA T2_type 1 139 0 11398 151 14 120 chr10 68335217 68337790 -71978975 - L1P3 LINE L1 -4395 2066 8 2521 65 0 0 chr10 68338238 68338532 -71978233 + AluY SINE Alu 1 294 -17 2163 104 0 14 chr10 68338546 68338843 -71977922 + AluY SINE Alu 14 306 -5 1210 163 32 0 chr10 68341383 68341629 -71975136 + L1 LINE L1 3236 3489 -2657 1816 91 0 25 chr10 68341630 68341871 -71974894 + AluSg SINE Alu 1 235 -75 8609 56 1 7 chr10 68342005 68343082 -71973683 - L1P LINE L1 -5067 1079 9 513 282 7 7 chr10 68343810 68343959 -71972806 + LTR67 LTR ERVL 409 557 0 18519 54 3 5 chr10 68344478 68346861 -71969904 + L1P LINE L1 2797 5174 -972 8518 133 12 7 chr10 68347385 68348660 -71968105 - L1P LINE L1 -4854 1292 11 7157 188 43 17 chr10 68348680 68350500 -71966265 - L1 LINE L1 -2364 4484 2547 1474 196 46 4 chr10 68350500 68350661 -71966104 - AluJb SINE Alu -20 292 112 441 0 0 0 chr10 68350661 68350710 -71966055 + (TG)n Simple_repeat Simple_repeat 2 50 0 1474 196 46 4 chr10 68350710 68350828 -71965937 - AluJb SINE Alu -200 112 1 7157 188 43 17 chr10 68350828 68352068 -71964697 - L1 LINE L1 -4301 2547 1341 383 271 50 29 chr10 68352385 68352525 -71964240 + L2 LINE L2 3159 3301 -12 207 327 200 0 chr10 68352750 68352860 -71963905 + L2 LINE L2 3126 3257 -15 950 217 81 86 chr10 68353862 68354551 -71962214 - L1ME LINE L1 -521 5641 4966 392 286 91 31 chr10 68354761 68355366 -71961399 + L1MEc LINE L1 785 1238 -4977 510 213 52 148 chr10 68355366 68355845 -71960920 + LTR27 LTR ERV1 1 626 -12 321 271 30 124 chr10 68355962 68356184 -71960581 + L1MEc LINE L1 1433 1667 -909 3343 140 4 0 chr10 68356283 68356803 -71959962 - L1PA16 LINE L1 -2 6815 6294 5655 206 10 4 chr10 68356803 68357987 -71958778 - L1PA16 LINE L1 -1567 5230 4040 2465 261 56 40 chr10 68358200 68359526 -71957239 - L1PA16 LINE L1 -4999 1795 1 357 330 33 60 chr10 68359535 68359989 -71956776 + L1ME LINE L1 90 531 -5539 413 258 142 22 chr10 68360248 68360566 -71956199 + L1ME LINE L1 579 934 -5136 286 171 43 0 chr10 68360605 68360675 -71956090 + L1M4 LINE L1 4379 4451 -1695 779 207 10 35 chr10 68360680 68360878 -71955887 + L1M4 LINE L1 4498 4690 -1456 31194 56 1 1 chr10 68361022 68365816 -71950949 + L1PA5 LINE L1 1350 6143 -11 441 129 0 0 chr10 68365819 68365889 -71950876 + (TA)n Simple_repeat Simple_repeat 1 70 0 4810 176 12 1 chr10 68365889 68366799 -71949966 + L1PB4 LINE L1 3786 4705 -1441 2109 122 18 0 chr10 68366841 68367170 -71949595 + L1PB4 LINE L1 5461 5795 -361 306 227 0 0 chr10 68367170 68367245 -71949520 + (TA)n Simple_repeat Simple_repeat 1 75 0 7608 29 1 0 chr10 68367246 68368353 -71948412 + L1PA3 LINE L1 5045 6152 -3 1399 241 15 0 chr10 68368433 68368769 -71947996 + L1PB4 LINE L1 5814 6154 -2 204 188 0 0 chr10 68369626 68369658 -71947107 + (TG)n Simple_repeat Simple_repeat 2 33 0 186 270 0 0 chr10 68369686 68369749 -71947016 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 1944 169 0 3 chr10 68372046 68372348 -71944417 - AluJb SINE Alu -7 305 5 450 223 83 0 chr10 68372736 68372857 -71943908 + LTR16A1 LTR ERVL 178 308 -149 333 205 0 13 chr10 68372857 68372935 -71943830 - Charlie5 DNA MER1_type 0 2624 2548 1247 156 95 10 chr10 68372984 68373279 -71943486 - Charlie5 DNA MER1_type -57 2555 2236 517 229 34 0 chr10 68373283 68373401 -71943364 - Charlie5 DNA MER1_type -2489 123 2 528 210 32 0 chr10 68373419 68373543 -71943222 + LTR16A1 LTR ERVL 324 451 -6 302 367 0 0 chr10 68373897 68373976 -71942789 + MIR SINE MIR 58 136 -72 205 200 0 0 chr10 68374014 68374054 -71942711 + (TTA)n Simple_repeat Simple_repeat 1 40 0 7582 58 2 4 chr10 68374332 68375311 -71941454 - L1P LINE L1 -1891 4255 3279 2419 124 14 38 chr10 68375311 68375738 -71941027 + L1M2 LINE L1 5335 5751 -561 22 23 0 45 chr10 68375931 68375947 -71940818 + AT_rich Low_complexity Low_complexity 1 16 -26 2169 115 3 0 chr10 68375947 68376242 -71940523 + AluSc SINE Alu 1 296 -13 22 23 0 45 chr10 68376242 68376269 -71940496 + AT_rich Low_complexity Low_complexity 16 42 0 374 299 0 67 chr10 68377169 68377271 -71939494 + MIR3 SINE MIR 53 145 -63 1885 142 40 3 chr10 68377271 68377567 -71939198 + AluSg SINE Alu 1 307 -3 374 299 0 67 chr10 68377567 68377598 -71939167 + MIR3 SINE MIR 145 177 -31 352 0 0 0 chr10 68377762 68377807 -71938958 - L1PA4 LINE L1 -1 6154 6110 194 62 15 92 chr10 68377913 68377978 -71938787 + (TTTTTG)n Simple_repeat Simple_repeat 1 60 0 1479 129 0 5 chr10 68379209 68379426 -71937339 - AluSq SINE Alu -16 297 82 180 313 36 48 chr10 68379550 68379633 -71937132 - L3b LINE CR1 -289 1294 1213 3394 174 25 6 chr10 68379808 68380517 -71936248 - L1MA9 LINE L1 -14 6298 5479 307 128 0 0 chr10 68380518 68380565 -71936200 + L1MA9 LINE L1 5451 5497 -794 202 353 0 49 chr10 68381081 68381183 -71935582 - L2 LINE L2 -35 3278 3182 21 36 0 0 chr10 68381742 68381770 -71934995 + AT_rich Low_complexity Low_complexity 1 28 0 389 280 9 28 chr10 68382832 68382939 -71933826 - L2 LINE L2 -16 3297 3193 597 300 50 25 chr10 68383209 68383441 -71933324 + MIR SINE MIR 16 249 -13 235 298 269 0 chr10 68386492 68386596 -71930169 - L2 LINE L2 -8 3264 3133 310 281 144 7 chr10 68386617 68386756 -71930009 - MIR SINE MIR -7 255 98 2528 30 23 0 chr10 68387408 68387707 -71929058 + AluY SINE Alu 1 306 -5 285 314 44 27 chr10 68389737 68389906 -71926859 + MIR SINE MIR 22 192 -70 254 276 171 29 chr10 68389919 68390024 -71926741 - L2 LINE L2 -3 3269 3150 220 241 17 17 chr10 68390132 68390190 -71926575 - L2 LINE L2 -6 3307 3250 7085 117 12 20 chr10 68390194 68390262 -71926503 + HSMAR2 DNA Mariner 212 279 -1023 2101 124 3 0 chr10 68390262 68390573 -71926192 + AluSx SINE Alu 1 312 0 7085 117 12 20 chr10 68390573 68391602 -71925163 + HSMAR2 DNA Mariner 279 1301 -1 218 361 35 35 chr10 68391603 68391772 -71924993 + L2 LINE L2 2722 2890 -424 275 271 83 77 chr10 68391910 68392091 -71924674 + L2 LINE L2 3122 3303 -10 1503 128 11 11 chr10 68392181 68392447 -71924318 + L1MA8 LINE L1 6014 6279 -12 1477 160 14 7 chr10 68392451 68392733 -71924032 + L1MA4 LINE L1 6007 6290 -10 1641 58 10 0 chr10 68392733 68392938 -71923827 + L1PA3 LINE L1 5941 6148 -7 261 0 0 0 chr10 68392943 68392972 -71923793 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 2505 106 8 19 chr10 68393093 68393461 -71923304 + THE1B LTR MaLR 1 364 0 11685 92 5 4 chr10 68393461 68395039 -71921726 + THE1B-int LTR MaLR 1 1580 0 1929 111 8 93 chr10 68395039 68395392 -71921373 + THE1B LTR MaLR 1 323 -41 811 141 63 21 chr10 68395544 68395686 -71921079 - THE1C LTR MaLR -227 148 1 25 0 0 0 chr10 68397198 68397223 -71919542 + AT_rich Low_complexity Low_complexity 1 25 0 323 136 25 123 chr10 68399342 68399423 -71917342 - MLT1K LTR MaLR -325 263 191 428 315 19 69 chr10 68399542 68399681 -71917084 + MIR SINE MIR 45 171 -91 2117 129 3 3 chr10 68399681 68399990 -71916775 - AluSx SINE Alu -3 309 1 428 315 19 69 chr10 68399990 68400066 -71916699 + MIR SINE MIR 171 249 -13 693 259 21 47 chr10 68400498 68400691 -71916074 - MER58A DNA MER1_type -35 189 2 192 77 0 0 chr10 68402197 68402223 -71914542 + (GGAAA)n Simple_repeat Simple_repeat 5 30 0 990 187 0 0 chr10 68403776 68403942 -71912823 + FRAM SINE Alu 1 166 0 1888 165 7 0 chr10 68404473 68404795 -71911970 - AluJo SINE Alu 0 312 1 1234 112 34 29 chr10 68404808 68405014 -71911751 - L1PA13 LINE L1 0 6163 5957 704 202 0 16 chr10 68405032 68405161 -71911604 + FLAM_A SINE Alu 1 127 -6 25 31 0 0 chr10 68405177 68405209 -71911556 + AT_rich Low_complexity Low_complexity 1 32 0 489 233 154 96 chr10 68405347 68405691 -71911074 + MLT1J2 LTR MaLR 75 438 -12 2596 62 0 9 chr10 68406217 68406557 -71910208 + L1PA7 LINE L1 5818 6154 0 4864 74 1 1 chr10 68406585 68407231 -71909534 - L1MA2 LINE L1 0 6304 5659 234 0 0 0 chr10 68407428 68407454 -71909311 + (CA)n Simple_repeat Simple_repeat 2 27 0 1758 164 0 38 chr10 68407561 68407744 -71909021 - AluJb SINE Alu -7 305 138 249 57 0 0 chr10 68407744 68407779 -71908986 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1758 164 0 38 chr10 68407779 68407912 -71908853 - AluJb SINE Alu -174 138 1 806 198 22 50 chr10 68407933 68408115 -71908650 - MER20 DNA MER1_type -42 177 1 202 250 0 0 chr10 68408590 68408634 -71908131 - L2 LINE L2 -15 3298 3255 2032 196 17 46 chr10 68409137 68409616 -71907149 + MER41B LTR ERV1 132 596 -39 661 244 67 25 chr10 68410401 68410631 -71906134 - MER2 DNA MER2_type 0 345 106 1858 136 44 25 chr10 68410631 68410948 -71905817 + LTR24 LTR ERV1 1 323 -144 565 100 12 12 chr10 68410955 68411035 -71905730 - MER2 DNA MER2_type -237 108 29 * 1667 176 29 49 chr10 68411024 68411370 -71905395 + MLT1B LTR MaLR 52 390 0 3544 213 33 20 chr10 68411377 68412231 -71904534 + L1ME1 LINE L1 5313 6334 0 24 0 0 0 chr10 68412347 68412371 -71904394 + AT_rich Low_complexity Low_complexity 1 24 0 475 183 8 75 chr10 68412947 68413067 -71903698 + L1PA15-16 LINE L1 905 1016 -5833 646 117 138 0 chr10 68413210 68413355 -71903410 + AluSq SINE Alu 136 300 -13 1031 329 179 22 chr10 68415014 68415755 -71901010 + L3 LINE CR1 296 1153 -424 611 344 60 44 chr10 68416101 68416554 -71900211 + L3 LINE CR1 1116 1575 -2 478 245 0 0 chr10 68416655 68416757 -71900008 + MER103 DNA DNA 1 102 -64 536 271 123 0 chr10 68417312 68417467 -71899298 + MIR SINE MIR 89 262 0 207 0 0 0 chr10 68418162 68418185 -71898580 + (A)n Simple_repeat Simple_repeat 1 23 0 2033 117 9 29 chr10 68418298 68418614 -71898151 + AluSg SINE Alu 1 310 0 227 176 27 40 chr10 68419148 68419222 -71897543 + (TTTA)n Simple_repeat Simple_repeat 4 76 0 25 0 0 0 chr10 68420222 68420247 -71896518 + AT_rich Low_complexity Low_complexity 1 25 0 356 258 24 8 chr10 68420551 68420675 -71896090 + (TA)n Simple_repeat Simple_repeat 2 127 0 385 254 201 18 chr10 68420845 68421014 -71895751 + MIR SINE MIR 2 201 -61 644 223 117 37 chr10 68421019 68421292 -71895473 - L1ME LINE L1 -319 5802 5508 22 0 0 0 chr10 68421364 68421386 -71895379 + AT_rich Low_complexity Low_complexity 1 22 0 456 317 118 5 chr10 68421483 68421704 -71895061 + MIR SINE MIR 17 262 0 330 406 36 48 chr10 68422225 68422474 -71894291 + L2 LINE L2 3008 3253 -19 192 370 74 42 chr10 68422512 68422728 -71894037 - L2 LINE L2 0 3272 3050 2548 224 25 25 chr10 68424215 68424844 -71891921 + L1MEc LINE L1 40 668 -5728 692 35 0 0 chr10 68425077 68425162 -71891603 - L1PA5 LINE L1 -3 6151 6067 22 56 0 0 chr10 68425162 68425198 -71891567 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr10 68425448 68425483 -71891282 + AT_rich Low_complexity Low_complexity 1 35 0 1625 189 7 3 chr10 68426145 68426430 -71890335 - AluJo SINE Alu -20 292 7 2420 201 243 19 chr10 68427766 68427992 -71888773 + L1M2 LINE L1 4369 4543 -1645 2630 140 31 5 chr10 68427992 68428406 -71888359 + MSTB LTR MaLR 1 425 -1 2420 201 243 19 chr10 68428406 68429049 -71887716 + L1M2 LINE L1 4543 5438 -750 22 0 0 0 chr10 68429089 68429111 -71887654 + AT_rich Low_complexity Low_complexity 1 22 0 1477 184 45 27 chr10 68429623 68429954 -71886811 + MER58B DNA MER1_type 4 340 -1 33 94 0 0 chr10 68430562 68430658 -71886107 + AT_rich Low_complexity Low_complexity 1 96 0 871 177 51 30 chr10 68430953 68431190 -71885575 + LTR1 LTR ERV1 11 252 -533 2835 118 66 4 chr10 68431239 68431757 -71885008 + LTR1 LTR ERV1 203 785 0 428 34 85 0 chr10 68432340 68432399 -71884366 - L1PA11 LINE L1 -1 6173 6110 580 144 9 36 chr10 68432434 68432545 -71884220 - LTR1 LTR ERV1 -533 252 145 2571 90 14 0 chr10 68432551 68432905 -71883860 - L1PA11 LINE L1 -67 6107 5749 24 53 0 0 chr10 68433252 68433290 -71883475 + AT_rich Low_complexity Low_complexity 1 38 0 20546 51 1 1 chr10 68433744 68437140 -71879625 - L1PA5 LINE L1 -2 6152 2754 2170 230 107 58 chr10 68437241 68438459 -71878306 + L1ME3A LINE L1 4753 6160 -10 1919 144 0 51 chr10 68438501 68438856 -71877909 - MER1B DNA MER1_type 0 337 1 240 274 0 0 chr10 68440255 68440306 -71876459 - L2 LINE L2 -1 3271 3221 285 367 86 7 chr10 68440430 68440569 -71876196 - L2 LINE L2 -177 3095 2946 787 201 8 0 chr10 68440571 68440705 -71876060 + Tigger3(Golem) DNA MER2_type 3 137 -2892 4799 109 69 25 chr10 68440724 68441538 -71875227 + Tigger3(Golem) DNA MER2_type 2179 3028 -1 240 307 60 85 chr10 68441548 68441831 -71874934 - L2 LINE L2 -374 2940 2665 494 101 112 0 chr10 68441920 68442009 -71874756 + L1PA15 LINE L1 6054 6152 -13 3153 185 55 22 chr10 68442258 68442951 -71873814 + L1MA9 LINE L1 5557 6272 -40 26 52 0 17 chr10 68442952 68442992 -71873773 + AT_rich Low_complexity Low_complexity 1 41 -16 2205 94 28 0 chr10 68442992 68443278 -71873487 - AluSq SINE Alu -19 294 1 26 52 0 17 chr10 68443278 68443295 -71873470 + AT_rich Low_complexity Low_complexity 41 57 0 2457 145 25 31 chr10 68444446 68444895 -71871870 - Tigger2 DNA MER2_type 0 2718 2273 419 143 0 14 chr10 68444885 68444955 -71871810 - Tigger2 DNA MER2_type -2649 69 1 * 526 214 202 36 chr10 68445161 68445409 -71871356 - L2 LINE L2 -15 3298 3010 217 286 152 9 chr10 68445401 68445513 -71871252 - L2 LINE L2 -423 2891 2764 * 629 149 35 21 chr10 68445701 68445842 -71870923 + L1MA9 LINE L1 6170 6312 0 2345 89 3 0 chr10 68445976 68446278 -71870487 + AluSp SINE Alu 1 303 -10 26 0 0 0 chr10 68448295 68448321 -71868444 + AT_rich Low_complexity Low_complexity 1 26 0 2415 60 0 10 chr10 68448485 68448783 -71867982 - AluY SINE Alu -16 295 1 180 206 110 41 chr10 68449169 68449242 -71867523 + L2 LINE L2 450 527 -2787 187 321 57 28 chr10 68450371 68450477 -71866288 + L2 LINE L2 3120 3228 -85 449 98 0 0 chr10 68450899 68450957 -71865808 - MLT1B LTR MaLR 0 390 333 459 145 0 26 chr10 68450957 68451033 -71865732 - MER1A DNA MER1_type -3 536 463 725 109 0 0 chr10 68451046 68451147 -71865618 - LTR12 LTR ERV1 -133 581 481 233 265 31 20 chr10 68451149 68451247 -71865518 - LTR30 LTR ERV1 -80 642 544 1010 98 136 18 chr10 68451247 68451424 -71865341 - LTR12 LTR ERV1 -421 2017 100 265 189 0 19 chr10 68451424 68451477 -71865288 - LTR30 LTR ERV1 -670 52 1 2880 90 48 64 chr10 68451477 68451933 -71864832 - MER1A DNA MER1_type -80 449 1 1900 131 14 58 chr10 68451933 68452291 -71864474 - MLT1B LTR MaLR -48 342 1 1203 292 160 61 chr10 68452690 68452822 -71863943 - L2 LINE L2 0 3313 3196 2298 110 0 3 chr10 68452822 68453131 -71863634 - AluSx SINE Alu -4 308 1 1203 292 160 61 chr10 68453131 68453965 -71862800 - L2 LINE L2 -117 3196 2242 244 337 60 0 chr10 68454069 68454152 -71862613 - L2 LINE L2 -1115 2199 2112 5265 103 16 11 chr10 68454274 68455060 -71861705 - L1PA13 LINE L1 -2 6161 5372 2175 135 3 0 chr10 68456349 68456696 -71860069 + L1 LINE L1 4706 5053 -1093 310 235 0 0 chr10 68458044 68458112 -71858653 + L1MC4 LINE L1 6636 6703 -1339 891 157 39 0 chr10 68458262 68458415 -71858350 - MER5B DNA MER1_type -19 159 1 2281 116 0 3 chr10 68458635 68458945 -71857820 + AluSg SINE Alu 1 309 -1 930 215 10 15 chr10 68459004 68459204 -71857561 + MER58A DNA MER1_type 26 224 0 243 250 0 0 chr10 68460930 68460986 -71855779 + MER34 LTR ERV1 1 56 -486 2254 79 3 20 chr10 68460993 68461285 -71855480 - AluSp SINE Alu -26 287 1 1573 228 74 10 chr10 68461322 68461810 -71854955 + LTR48B LTR ERV1 126 644 0 3909 160 73 58 chr10 68461812 68462713 -71854052 + LTR48B-int LTR ERV1 1 915 -5416 374 246 27 9 chr10 68462805 68462915 -71853850 + LTR48B-int LTR ERV1 1084 1195 -5136 329 265 0 0 chr10 68462931 68462999 -71853766 + tRNA-Glu-GAG tRNA tRNA 8 75 0 1864 145 30 17 chr10 68463065 68463362 -71853403 + AluJo SINE Alu 1 301 -11 969 119 50 100 chr10 68463376 68463636 -71853129 + LTR49-int LTR ERV1 1288 1534 -4797 818 265 9 14 chr10 68463679 68463902 -71852863 + LTR49-int LTR ERV1 1879 2100 -4231 * 2013 200 30 63 chr10 68463890 68464440 -71852325 + LTR49-int LTR ERV1 1344 3451 -177 3526 209 61 51 chr10 68464668 68466326 -71850439 + LTR49-int LTR ERV1 1690 4847 -1484 600 148 0 39 chr10 68466351 68466479 -71850286 + LTR49 LTR ERV1 473 595 0 227 217 117 0 chr10 68467353 68467413 -71849352 + MLT1I LTR MaLR 1 67 -342 624 269 74 31 chr10 68467660 68467916 -71848849 + MLT1I LTR MaLR 143 409 0 2671 164 53 4 chr10 68469045 68469466 -71847299 + L1MA9 LINE L1 5716 6171 -141 360 0 0 0 chr10 68469466 68469506 -71847259 + (CA)n Simple_repeat Simple_repeat 1 40 0 2671 164 53 4 chr10 68469506 68469627 -71847138 + L1MA9 LINE L1 6171 6285 -27 24 0 0 0 chr10 68469640 68469664 -71847101 + AT_rich Low_complexity Low_complexity 1 24 0 1762 203 8 21 chr10 68469734 68470113 -71846652 + L1PA16 LINE L1 -726 4294966943 -7199 11125 207 35 21 chr10 68470261 68474278 -71842487 + L1PA16 LINE L1 733 4423 -2426 2459 139 57 55 chr10 68474278 68474788 -71841977 + MER9 LTR ERVK 1 511 0 11125 207 35 21 chr10 68474788 68475560 -71841205 + L1PA16 LINE L1 4423 5183 -1666 10524 25 1 0 chr10 68475552 68476857 -71839908 - L1PA3 LINE L1 -868 5278 3972 * 7170 25 11 0 chr10 68476857 68477696 -71839069 + L1PA3 LINE L1 5301 6152 -3 22 35 0 0 chr10 68477696 68477725 -71839040 + AT_rich Low_complexity Low_complexity 1 29 0 5442 117 4 49 chr10 68477725 68479448 -71837317 + L1PA16 LINE L1 5166 6869 0 410 267 42 30 chr10 68480456 68480621 -71836144 + MIR SINE MIR 91 256 -6 308 344 77 26 chr10 68480657 68480852 -71835913 - L3b LINE CR1 -255 1328 1124 2273 107 0 3 chr10 68482298 68482598 -71834167 - AluSq SINE Alu -14 299 1 1582 126 5 0 chr10 68482600 68482815 -71833950 - AluSg/x SINE Alu -14 296 81 1067 130 0 0 chr10 68482815 68482961 -71833804 - AluSq/x SINE Alu -165 148 3 33 43 0 0 chr10 68483661 68483708 -71833057 + AT_rich Low_complexity Low_complexity 1 47 0 191 188 21 0 chr10 68483716 68483764 -71833001 + (TA)n Simple_repeat Simple_repeat 2 50 0 205 189 0 0 chr10 68483776 68483813 -71832952 - L2 LINE L2 -957 2357 2321 328 204 0 0 chr10 68483820 68483896 -71832869 - L1MA9 LINE L1 -347 5950 5875 27 0 0 0 chr10 68484324 68484351 -71832414 + AT_rich Low_complexity Low_complexity 1 27 0 278 357 163 40 chr10 68485190 68485761 -71831004 - L2 LINE L2 -5 3267 2623 24 77 0 0 chr10 68485817 68485869 -71830896 + AT_rich Low_complexity Low_complexity 1 52 0 213 309 41 31 chr10 68485879 68485976 -71830789 - L2 LINE L2 -991 2323 2226 191 182 0 0 chr10 68486398 68486431 -71830334 - L2 LINE L2 0 3313 3281 430 304 74 0 chr10 68486538 68486686 -71830079 - L2 LINE L2 -221 3092 2934 2373 64 3 3 chr10 68487208 68487505 -71829260 + AluY SINE Alu 1 297 -14 220 329 0 43 chr10 68488507 68488577 -71828188 + MIR SINE MIR 41 107 -155 804 137 49 27 chr10 68488825 68489008 -71827757 - MER53 DNA DNA -2 187 1 27053 89 4 8 chr10 68490872 68495784 -71820981 - L1PA7 LINE L1 -13 6456 1573 10739 119 17 4 chr10 68595789 68598122 -71718643 + L1PA10 LINE L1 3815 6168 0 5758 146 17 47 chr10 68598126 68598556 -71718209 + L1MA4 LINE L1 4946 5388 -912 1491 179 48 31 chr10 68598556 68598847 -71717918 + AluJo SINE Alu 1 296 -16 5758 146 17 47 chr10 68598847 68599160 -71717605 + L1MA4 LINE L1 5388 5709 -591 2244 125 0 3 chr10 68599160 68599471 -71717294 + AluSx SINE Alu 1 310 -2 5758 146 17 47 chr10 68599471 68600111 -71716654 + L1MA4 LINE L1 5709 6298 -2 1457 216 58 14 chr10 68600134 68600495 -71716270 + L1MB5 LINE L1 5798 6174 0 247 293 17 0 chr10 68600669 68600727 -71716038 - L2 LINE L2 -19 3294 3236 369 185 0 0 chr10 68600817 68600882 -71715883 - MLT1F1 LTR MaLR -4 563 499 327 203 0 0 chr10 68600938 68600983 -71715782 + MLT2B1 LTR ERVL 2 46 -474 2137 159 36 32 chr10 68600983 68601543 -71715222 + MLT2A2 LTR ERVL 1 554 0 1769 205 12 4 chr10 68601543 68601931 -71714834 + MLT2B1 LTR ERVL 42 474 -41 393 136 0 0 chr10 68601931 68601997 -71714768 + (CA)n Simple_repeat Simple_repeat 1 66 0 1575 211 50 50 chr10 68603191 68603711 -71713054 + MLT1E1 LTR MaLR 1 654 0 788 193 43 0 chr10 68604071 68604211 -71712554 - MER7A DNA MER2_type 0 336 191 * 3480 99 59 6 chr10 68604203 68604696 -71712069 + MER1A DNA MER1_type 11 529 0 1157 148 84 20 chr10 68604696 68604896 -71711869 - MER7A DNA MER2_type -135 211 1 451 231 120 0 chr10 68604896 68605013 -71711752 + MIR3 SINE MIR 75 205 -3 21 0 0 0 chr10 68605031 68605052 -71711713 + AT_rich Low_complexity Low_complexity 1 21 0 2410 76 7 0 chr10 68605237 68605539 -71711226 + AluY SINE Alu 1 304 -7 1845 205 104 29 chr10 68606274 68606727 -71710038 + LTR2B LTR ERV1 3 489 -1 24 0 0 0 chr10 68606907 68606931 -71709834 + AT_rich Low_complexity Low_complexity 1 24 0 504 107 0 0 chr10 68608150 68608225 -71708540 + tRNA-Ser-TCA tRNA tRNA 8 82 -3 588 222 37 134 chr10 68608682 68608735 -71708030 + L1ME4a LINE L1 5780 5837 -284 2683 30 0 3 chr10 68608735 68609039 -71707726 + AluY SINE Alu 1 303 -8 588 222 37 134 chr10 68609039 68609359 -71707406 + L1ME4a LINE L1 5837 6117 -4 304 204 31 4 chr10 68609676 68609745 -71707020 - MLT1J LTR MaLR -2 509 448 22 0 0 0 chr10 68609823 68609845 -71706920 + AT_rich Low_complexity Low_complexity 1 22 0 2272 89 7 3 chr10 68609873 68610176 -71706589 + AluSq SINE Alu 1 304 -9 366 259 50 58 chr10 68610414 68610553 -71706212 - MLT1J LTR MaLR -145 366 229 779 256 99 94 chr10 68611037 68611451 -71705314 + LTR67 LTR ERVL 97 512 -45 1982 113 25 0 chr10 68611610 68611909 -71704856 + AluSx SINE Alu 1 306 0 1807 153 16 22 chr10 68611938 68612252 -71704513 - AluJb SINE Alu 0 312 1 194 278 191 71 chr10 68612314 68612440 -71704325 + L2 LINE L2 3132 3272 0 243 241 0 0 chr10 68612672 68612726 -71704039 + CT-rich Low_complexity Low_complexity 4 57 0 624 359 98 15 chr10 68613356 68613896 -71702869 + L2 LINE L2 2364 2948 -366 2054 137 3 0 chr10 68615326 68615619 -71701146 + AluSx SINE Alu 1 294 -18 1237 149 43 19 chr10 68615837 68616045 -71700720 - MER58A DNA MER1_type 0 224 12 552 280 13 19 chr10 68616512 68616669 -71700096 + MIR SINE MIR 20 175 -87 180 0 0 0 chr10 68617092 68617112 -71699653 + (T)n Simple_repeat Simple_repeat 1 20 0 2010 109 60 0 chr10 68617348 68617633 -71699132 - AluSq SINE Alu -11 302 1 259 297 44 22 chr10 68617705 68617796 -71698969 + L2 LINE L2 2765 2857 -457 275 104 21 0 chr10 68617939 68617987 -71698778 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr10 68618008 68618030 -71698735 + AT_rich Low_complexity Low_complexity 1 22 0 2141 120 0 10 chr10 68618076 68618384 -71698381 + AluSx SINE Alu 1 305 -7 311 252 109 89 chr10 68618597 68618899 -71697866 - L1MC4a LINE L1 -1797 6011 5704 185 254 48 0 chr10 68619054 68619117 -71697648 - L3 LINE CR1 -108 1469 1404 402 273 170 64 chr10 68620245 68620604 -71696161 - LTR33 LTR ERVL 0 521 125 744 161 0 91 chr10 68620798 68620941 -71695824 + FLAM_A SINE Alu 4 133 0 1505 191 0 15 chr10 68620941 68621208 -71695557 - AluJo SINE Alu -49 263 1 477 305 67 72 chr10 68621440 68621870 -71694895 - L1ME4a LINE L1 -294 5827 5400 588 194 133 24 chr10 68622426 68622591 -71694174 - MER5A DNA MER1_type 0 189 7 326 85 0 0 chr10 68622796 68622843 -71693922 - AluJb SINE Alu 0 302 256 635 157 0 58 chr10 68622843 68622964 -71693801 + AluJo/FRAM SINE Alu 137 250 -62 1543 176 11 11 chr10 68622964 68623236 -71693529 - AluJb SINE Alu -38 274 3 283 281 16 0 chr10 68623257 68623321 -71693444 - L2 LINE L2 -60 3212 3148 600 110 0 0 chr10 68623975 68624057 -71692708 - AluJb SINE Alu -5 307 226 1231 92 0 12 chr10 68624057 68624220 -71692545 - AluJb SINE Alu -122 190 30 273 333 77 24 chr10 68624901 68625108 -71691657 - L2 LINE L2 -17 3255 3038 * 341 312 45 13 chr10 68625080 68625234 -71691531 - MIR3 SINE MIR -17 191 33 1797 157 3 27 chr10 68625431 68625731 -71691034 + AluJo SINE Alu 1 293 -19 1744 179 106 50 chr10 68625904 68625969 -71690796 - MLT1C LTR MaLR 0 467 407 2127 138 0 0 chr10 68625969 68626274 -71690491 - AluJb SINE Alu -7 305 1 1744 179 106 50 chr10 68626274 68626650 -71690115 - MLT1C LTR MaLR -60 407 1 1098 214 70 20 chr10 68626677 68627018 -71689747 - L1MC5 LINE L1 -57 7904 7547 658 289 40 102 chr10 68627469 68627822 -71688943 + L2 LINE L2 2941 3271 -1 302 226 11 43 chr10 68627826 68627919 -71688846 + GA-rich Low_complexity Low_complexity 3 92 0 3085 128 7 0 chr10 68627951 68628382 -71688383 + MER57B LTR ERV1 1 434 0 1591 166 64 11 chr10 68628482 68628765 -71688000 - AluJo SINE Alu -14 298 1 269 279 96 52 chr10 68628777 68628913 -71687852 + Charlie8 DNA MER1_type 72 213 -2204 259 273 30 0 chr10 68629020 68629086 -71687679 + Charlie8 DNA MER1_type 2341 2408 -9 987 183 47 5 chr10 68629165 68629356 -71687409 + MER3 DNA MER1_type 3 201 -8 530 237 191 0 chr10 68629371 68629523 -71687242 - MER5A DNA MER1_type 0 189 9 677 250 6 24 chr10 68629547 68629601 -71687164 - MER5A DNA MER1_type -8 181 128 2063 102 3 58 chr10 68629601 68629914 -71686851 + AluSg SINE Alu 1 296 -14 677 250 6 24 chr10 68629914 68630023 -71686742 - MER5A DNA MER1_type -61 128 21 1342 182 33 119 chr10 68630088 68630380 -71686385 - MLT1A1 LTR MaLR -4 361 110 2907 159 19 16 chr10 68630380 68630864 -71685901 + LTR45B LTR ERV1 5 489 0 1342 182 33 119 chr10 68630864 68630966 -71685799 - MLT1A1 LTR MaLR -255 110 1 2250 103 3 0 chr10 68630971 68631271 -71685494 + AluSq SINE Alu 1 301 -12 1152 150 0 0 chr10 68631272 68631439 -71685326 + AluSg/x SINE Alu 135 301 -11 450 139 0 0 chr10 68631510 68631582 -71685183 - MIR SINE MIR -123 139 68 271 265 103 0 chr10 68631757 68631825 -71684940 - MIR SINE MIR -58 150 76 221 255 235 39 chr10 68632465 68632567 -71684198 - MER5B DNA MER1_type -3 175 54 1974 192 44 25 chr10 68632569 68632976 -71683789 - MER21B LTR ERV1 0 863 449 292 61 143 0 chr10 68632976 68633025 -71683740 - LTR23 LTR ERV1 0 437 382 2315 83 3 0 chr10 68633028 68633316 -71683449 + AluSx SINE Alu 1 289 -23 2403 167 88 12 chr10 68633337 68633756 -71683009 - MER21B LTR ERV1 -411 452 2 196 311 133 11 chr10 68634413 68634503 -71682262 - MIR3 SINE MIR -42 166 66 516 270 61 25 chr10 68635585 68635781 -71680984 + L1MC4a LINE L1 5571 5773 -2035 1059 127 0 6 chr10 68635799 68635989 -71680776 + AluSq SINE Alu 128 316 0 361 303 43 6 chr10 68635989 68636151 -71680614 + L1MC4a LINE L1 5772 5939 -1869 844 154 0 0 chr10 68636408 68636531 -71680234 + FLAM_C SINE Alu 1 123 -20 261 0 0 0 chr10 68636555 68636584 -71680181 + (TG)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr10 68638169 68638213 -71678552 + AT_rich Low_complexity Low_complexity 1 44 0 1899 101 0 91 chr10 68638218 68638536 -71678229 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr10 68638539 68638561 -71678204 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2155 154 25 19 chr10 68638687 68639050 -71677715 - MLT1A1 LTR MaLR 0 365 1 2105 125 0 7 chr10 68639284 68639580 -71677185 + AluSx SINE Alu 1 294 -18 2129 121 0 0 chr10 68639633 68639914 -71676851 + AluSg SINE Alu 5 285 -25 1719 167 32 0 chr10 68640008 68640289 -71676476 + AluJo SINE Alu 1 290 -22 993 251 103 67 chr10 68641265 68641400 -71675365 + L1ME4a LINE L1 5483 5612 -509 2551 47 0 0 chr10 68641400 68641699 -71675066 + AluY SINE Alu 2 300 -11 993 251 103 67 chr10 68641699 68642038 -71674727 + L1ME4a LINE L1 5612 5937 -184 1738 171 7 7 chr10 68642038 68642342 -71674423 + AluJb SINE Alu 1 304 -8 993 251 103 67 chr10 68642342 68642393 -71674372 + L1ME4a LINE L1 5937 5985 -136 2525 74 3 0 chr10 68642393 68642705 -71674060 - AluSp SINE Alu 0 313 1 993 251 103 67 chr10 68642705 68642778 -71673987 + L1ME4a LINE L1 5985 6105 -16 319 316 68 23 chr10 68643100 68643233 -71673532 + L1ME4a LINE L1 5980 6118 -3 2309 76 14 0 chr10 68643243 68643532 -71673233 + AluSg SINE Alu 1 293 -17 1066 256 108 28 chr10 68643541 68643589 -71673176 - LTR16C LTR ERVL -5 486 443 2029 141 30 0 chr10 68643589 68643888 -71672877 + AluJb SINE Alu 1 308 -4 1066 256 108 28 chr10 68643888 68644199 -71672566 - LTR16C LTR ERVL -48 443 98 2105 101 7 3 chr10 68644308 68644596 -71672169 + AluSg SINE Alu 5 293 -17 2312 108 0 0 chr10 68645152 68645448 -71671317 + AluSq SINE Alu 5 300 -13 2040 130 3 34 chr10 68645482 68645804 -71670961 - AluJo SINE Alu 0 312 1 1533 189 26 43 chr10 68645888 68646309 -71670456 + MER65C LTR ERV1 1 461 0 222 278 0 0 chr10 68646420 68646474 -71670291 - MIR SINE MIR -21 241 188 321 26 0 0 chr10 68646474 68646512 -71670253 + (TG)n Simple_repeat Simple_repeat 1 38 0 1317 184 45 4 chr10 68646512 68646778 -71669987 - AluJb SINE Alu -33 279 3 485 277 7 28 chr10 68646781 68646922 -71669843 - MIR SINE MIR -65 197 60 905 236 4 61 chr10 68647896 68647995 -71668770 - MIR SINE MIR -10 252 149 883 237 0 6 chr10 68647995 68648164 -71668601 - FAM SINE Alu -6 169 2 905 236 4 61 chr10 68648164 68648293 -71668472 - MIR SINE MIR -113 149 37 2214 121 0 0 chr10 68648390 68648687 -71668078 + AluSx SINE Alu 1 297 -15 730 256 14 107 chr10 68648714 68649003 -71667762 + MIR SINE MIR 1 262 0 22 70 0 0 chr10 68649449 68649492 -71667273 + AT_rich Low_complexity Low_complexity 1 43 0 225 132 0 0 chr10 68649689 68649727 -71667038 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2320 107 0 3 chr10 68650182 68650490 -71666275 + AluSx SINE Alu 1 307 -5 289 231 200 15 chr10 68650490 68650609 -71666156 + L1ME4a LINE L1 5971 6117 -4 2120 122 3 3 chr10 68650621 68650917 -71665848 + AluSg SINE Alu 1 296 -14 619 188 0 0 chr10 68652142 68652243 -71664522 + U6 snRNA snRNA 1 101 -6 210 37 0 0 chr10 68652247 68652274 -71664491 + (CA)n Simple_repeat Simple_repeat 2 28 0 2647 109 5 35 chr10 68653247 68653614 -71663151 + L1PB3 LINE L1 5764 6120 -34 1867 128 203 11 chr10 68653614 68653973 -71662792 - MSTA LTR MaLR 0 428 1 2647 109 5 35 chr10 68653973 68654000 -71662765 + L1PB3 LINE L1 6120 6146 -8 404 96 0 0 chr10 68654269 68654321 -71662444 + Alu SINE Alu 1 52 -259 246 136 19 19 chr10 68655394 68655448 -71661317 + MIR SINE MIR 67 125 -83 197 343 30 0 chr10 68655515 68655582 -71661183 - L2 LINE L2 -22 3291 3223 258 376 42 28 chr10 68655832 68656045 -71660720 - L2 LINE L2 -383 2931 2716 2132 90 3 39 chr10 68656202 68656513 -71660252 + AluSg1 SINE Alu 1 300 -9 1051 145 0 0 chr10 68656514 68656680 -71660085 + AluSg/x SINE Alu 133 298 -12 946 192 6 17 chr10 68656680 68656852 -71659913 + MLT1A1 LTR MaLR 34 203 -162 1167 139 0 0 chr10 68656852 68657017 -71659748 + AluSg/x SINE Alu 132 296 -16 4888 179 39 19 chr10 68657017 68657108 -71659657 + L1MB7 LINE L1 4307 4395 -1789 2267 94 0 33 chr10 68657108 68657415 -71659350 + AluSg SINE Alu 1 297 -13 4888 179 39 19 chr10 68657415 68658867 -71657898 + L1MB7 LINE L1 4390 5880 -299 2433 99 3 0 chr10 68658867 68659179 -71657586 + AluSp SINE Alu 1 313 0 244 156 22 0 chr10 68659902 68659947 -71656818 + L1ME4a LINE L1 5967 6012 -109 25 31 0 0 chr10 68659983 68660015 -71656750 + AT_rich Low_complexity Low_complexity 1 32 0 2148 128 3 3 chr10 68660180 68660486 -71656279 - AluSx SINE Alu -6 306 1 363 288 125 27 chr10 68660831 68661015 -71655750 - MIR SINE MIR -49 213 12 2055 149 0 13 chr10 68661235 68661543 -71655222 + AluSx SINE Alu 1 304 -8 1826 157 0 11 chr10 68661561 68661847 -71654918 + AluJb SINE Alu 1 283 -29 2228 100 7 0 chr10 68662301 68662592 -71654173 - AluSq SINE Alu -17 296 4 2339 70 0 7 chr10 68662692 68662991 -71653774 + AluY SINE Alu 1 297 -14 2018 125 7 0 chr10 68662997 68663284 -71653481 + AluSx SINE Alu 1 289 -23 1183 80 17 0 chr10 68663284 68663460 -71653305 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 188 354 62 18 chr10 68663469 68663582 -71653183 - L2 LINE L2 0 3272 3155 1006 205 133 25 chr10 68663934 68664258 -71652507 + L1ME3 LINE L1 5807 6170 0 2405 99 3 0 chr10 68664411 68664723 -71652042 - AluSp SINE Alu 0 313 1 2338 93 3 0 chr10 68664875 68665166 -71651599 + AluSp SINE Alu 1 292 -21 887 346 103 19 chr10 68665341 68666213 -71650552 - L2 LINE L2 -670 2644 1700 1833 92 32 35 chr10 68666361 68666643 -71650122 + AluSx SINE Alu 14 294 -18 1706 177 32 0 chr10 68667069 68667352 -71649413 + AluJo SINE Alu 2 293 -19 2365 101 0 0 chr10 68667598 68667895 -71648870 + AluSg SINE Alu 3 299 -11 23 54 0 0 chr10 68668001 68668038 -71648727 + AT_rich Low_complexity Low_complexity 1 37 0 2328 96 0 3 chr10 68668350 68668673 -71648092 - AluSx SINE Alu 0 312 3 274 262 354 0 chr10 68668675 68668839 -71647926 + MIR SINE MIR 41 262 0 206 263 0 18 chr10 68668846 68668903 -71647862 - MIR SINE MIR -150 112 57 2021 141 36 0 chr10 68668929 68669235 -71647530 - 7SLRNA srpRNA srpRNA 0 320 4 1839 176 3 0 chr10 68669772 68670074 -71646691 - AluJb SINE Alu -9 303 1 367 98 63 35 chr10 68670094 68670268 -71646497 + (TA)n Simple_repeat Simple_repeat 2 180 0 185 44 82 59 chr10 68670292 68670427 -71646338 + (TA)n Simple_repeat Simple_repeat 2 139 0 310 51 67 62 chr10 68670451 68670629 -71646136 + (TA)n Simple_repeat Simple_repeat 2 180 0 2295 108 0 0 chr10 68670745 68671041 -71645724 + AluSx SINE Alu 1 296 -16 2227 108 7 3 chr10 68671045 68671342 -71645423 + AluSq SINE Alu 1 298 -15 302 324 22 0 chr10 68671789 68671907 -71644858 + L1ME4a LINE L1 5473 5590 -531 289 277 0 0 chr10 68671908 68671991 -71644774 + (TA)n Simple_repeat Simple_repeat 1 83 0 198 103 0 0 chr10 68672315 68672344 -71644421 + (TA)n Simple_repeat Simple_repeat 1 29 0 384 264 58 42 chr10 68672345 68672484 -71644281 + L1ME4a LINE L1 5592 5738 -383 3789 124 15 32 chr10 68672484 68672999 -71643766 + LTR19B LTR ERV1 1 506 -74 2539 65 0 3 chr10 68672999 68673308 -71643457 + AluY SINE Alu 1 308 -3 3789 124 15 32 chr10 68673308 68673382 -71643383 + LTR19B LTR ERV1 506 580 0 384 264 58 42 chr10 68673382 68673503 -71643262 + L1ME4a LINE L1 5738 5856 -265 25 65 0 0 chr10 68673625 68673671 -71643094 + AT_rich Low_complexity Low_complexity 1 46 0 2069 103 31 21 chr10 68673674 68673965 -71642800 + AluSx SINE Alu 3 296 -16 2430 63 0 0 chr10 68673967 68674299 -71642466 + AluY SINE Alu 1 332 0 979 226 19 0 chr10 68674299 68674511 -71642254 - MIR SINE MIR -15 247 32 338 202 0 10 chr10 68674511 68674547 -71642218 + (CATATA)n Simple_repeat Simple_repeat 5 40 -62 2129 119 0 3 chr10 68674547 68674833 -71641932 + AluSg SINE Alu 1 285 -25 338 202 0 10 chr10 68674833 68674895 -71641870 + (CATATA)n Simple_repeat Simple_repeat 40 102 0 198 0 0 0 chr10 68675398 68675420 -71641345 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2416 96 6 3 chr10 68675624 68675936 -71640829 + AluSq SINE Alu 1 313 0 2810 187 71 40 chr10 68676105 68676837 -71639928 + L1MC4a LINE L1 6897 7651 -157 889 131 46 20 chr10 68676854 68677007 -71639758 + MER58A DNA MER1_type 34 190 -34 366 61 0 0 chr10 68677061 68677110 -71639655 + (TC)n Simple_repeat Simple_repeat 1 49 0 455 233 0 0 chr10 68677116 68677202 -71639563 - MER96 DNA MER1_type? -89 86 1 718 161 27 7 chr10 68677819 68677968 -71638797 + L1MD3 LINE L1 7844 7995 0 464 233 52 0 chr10 68678071 68678187 -71638578 - MIR SINE MIR -29 233 112 2060 113 27 10 chr10 68678187 68678487 -71638278 + AluSx SINE Alu 1 305 -7 2331 114 0 0 chr10 68679050 68679356 -71637409 + AluSc SINE Alu 1 306 -3 279 0 0 0 chr10 68679358 68679389 -71637376 + (CA)n Simple_repeat Simple_repeat 2 32 0 3070 40 0 5 chr10 68679647 68680021 -71636744 + L1PA8 LINE L1 5801 6172 0 53 69 0 0 chr10 68680523 68680625 -71636140 + AT_rich Low_complexity Low_complexity 1 102 0 497 273 129 16 chr10 68680625 68680936 -71635829 + L1ME4a LINE L1 5695 6040 -81 23 0 0 0 chr10 68681151 68681174 -71635591 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 68681272 68681303 -71635462 + AT_rich Low_complexity Low_complexity 1 31 0 1730 153 0 44 chr10 68682129 68682449 -71634316 - AluJb SINE Alu -6 306 1 205 309 0 15 chr10 68682453 68682521 -71634244 - L2 LINE L2 -88 3225 3159 1094 127 6 6 chr10 68682565 68682730 -71634035 + AluSc SINE Alu 134 298 -11 841 169 0 22 chr10 68682975 68683111 -71633654 - FLAM_C SINE Alu -10 133 1 2187 109 10 0 chr10 68683290 68683584 -71633181 + AluSg SINE Alu 1 297 -13 1308 189 9 3 chr10 68683604 68683861 -71632904 + L1M3 LINE L1 5519 5779 -404 2075 146 0 7 chr10 68683864 68684166 -71632599 + AluSx SINE Alu 1 300 -12 820 169 0 0 chr10 68684176 68684294 -71632471 + FLAM_C SINE Alu 1 118 -25 2238 97 14 0 chr10 68684314 68684603 -71632162 - AluSp SINE Alu -20 293 1 1416 190 12 0 chr10 68684610 68684852 -71631913 + MSTB LTR MaLR 182 426 0 6561 168 1 6 chr10 68684853 68685916 -71630849 + MSTA-int LTR MaLR 2 1059 -592 2467 162 18 43 chr10 68685918 68686306 -71630459 + MSTA LTR MaLR 1 397 -31 2093 101 4 7 chr10 68686306 68686609 -71630156 - AluSg1 SINE Alu 0 304 3 2220 137 0 0 chr10 68686618 68686924 -71629841 - AluSg SINE Alu -4 306 1 2467 162 18 43 chr10 68686924 68686963 -71629802 + MSTA LTR MaLR 405 428 0 3254 149 34 36 chr10 68686963 68687283 -71629482 + MSTA-int LTR MaLR 1057 1377 -274 2280 114 0 3 chr10 68687283 68687591 -71629174 - AluSx SINE Alu -4 308 2 3254 149 34 36 chr10 68687591 68687852 -71628913 + MSTA-int LTR MaLR 1377 1637 -14 2410 154 16 48 chr10 68687864 68688233 -71628532 + MSTA LTR MaLR 1 355 -73 1961 165 0 0 chr10 68688233 68688530 -71628235 + AluJb SINE Alu 1 297 -15 2410 154 16 48 chr10 68688530 68688602 -71628163 + MSTA LTR MaLR 355 428 0 1934 127 51 0 chr10 68688940 68689215 -71627550 + AluSg SINE Alu 1 289 -21 1503 202 36 10 chr10 68689220 68689522 -71627243 - MLT1A1 LTR MaLR -55 310 1 2238 101 10 0 chr10 68689618 68689915 -71626850 - AluY SINE Alu -11 300 1 1679 133 65 18 chr10 68690323 68690602 -71626163 + AluJo SINE Alu 1 292 -20 720 296 94 39 chr10 68690768 68690779 -71625986 + L1MC1 LINE L1 5299 5308 -2500 2464 57 0 28 chr10 68690779 68691096 -71625669 + AluY SINE Alu 2 309 -2 720 296 94 39 chr10 68691096 68691678 -71625087 + L1MC1 LINE L1 5308 5925 -1883 1950 105 3 67 chr10 68691749 68692063 -71624702 + AluSg SINE Alu 1 294 -16 2186 101 0 26 chr10 68692073 68692381 -71624384 + AluSq SINE Alu 1 300 -13 2226 82 7 0 chr10 68692569 68692860 -71623905 + AluSq SINE Alu 1 293 -20 570 151 0 0 chr10 68692860 68692966 -71623799 + G-rich Low_complexity Low_complexity 1 106 0 2484 53 0 7 chr10 68693917 68694218 -71622547 + AluY SINE Alu 1 299 -12 388 130 150 40 chr10 68694284 68694384 -71622381 + L1MC1 LINE L1 6204 6314 -19 180 0 0 0 chr10 68694387 68694407 -71622358 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2275 95 7 3 chr10 68694432 68694727 -71622038 + AluSq SINE Alu 1 296 -17 1215 137 96 4 chr10 68694750 68695155 -71621610 - LTR54 LTR ERV1 -7 503 1 216 255 0 20 chr10 68695181 68695232 -71621533 - MIR SINE MIR -188 74 25 1417 178 21 32 chr10 68695294 68695575 -71621190 + AluJo SINE Alu 19 296 -16 203 154 51 0 chr10 68695582 68695621 -71621144 + GA-rich Low_complexity Low_complexity 1 41 0 184 312 13 26 chr10 68695621 68695698 -71621067 + MIR SINE MIR 19 94 -114 448 242 176 0 chr10 68695728 68695881 -71620884 - MER5A DNA MER1_type 0 189 10 2692 55 0 0 chr10 68696027 68696338 -71620427 + AluY SINE Alu 1 311 0 221 0 35 0 chr10 68696882 68696911 -71619854 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1673 136 43 36 chr10 68696920 68697220 -71619545 + AluJo SINE Alu 1 302 0 1889 46 0 0 chr10 68697545 68697761 -71619004 + AluY SINE Alu 1 216 -95 1213 154 31 0 chr10 68697762 68697957 -71618808 + AluJo SINE Alu 95 295 -17 316 193 36 0 chr10 68697957 68698040 -71618725 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 315 216 0 62 chr10 68698040 68698137 -71618628 - L1MC4 LINE L1 -1337 6705 6615 * 318 315 0 0 chr10 68698066 68698155 -71618610 + L1MC4 LINE L1 6614 6702 -1340 390 42 0 0 chr10 68698155 68698203 -71618562 + (CA)n Simple_repeat Simple_repeat 1 48 0 492 249 97 38 chr10 68698464 68698649 -71618116 + MIR SINE MIR 67 262 0 2260 83 3 26 chr10 68699033 68699335 -71617430 - AluSp SINE Alu -18 295 1 465 281 147 21 chr10 68699702 68699830 -71616935 + L2 LINE L2 2807 2917 -396 1706 143 75 10 chr10 68699830 68700123 -71616642 - AluJb SINE Alu 0 312 1 465 281 147 21 chr10 68700123 68700406 -71616359 + L2 LINE L2 2917 3312 -1 318 229 229 56 chr10 68700526 68700698 -71616067 - L1MC4a LINE L1 -1633 6175 6034 2358 100 0 10 chr10 68700698 68701008 -71615757 - AluSg SINE Alu -3 307 1 318 229 229 56 chr10 68701008 68701019 -71615746 - L1MC4a LINE L1 -1774 6034 6026 2399 99 0 0 chr10 68701019 68701321 -71615444 - AluSg SINE Alu -8 302 1 2202 115 7 3 chr10 68701328 68701633 -71615132 - AluSq SINE Alu -7 306 1 318 229 229 56 chr10 68701633 68701707 -71615058 - L1MC4a LINE L1 -1786 6022 5863 528 258 94 88 chr10 68701724 68701919 -71614846 - L1MC4a LINE L1 -326 5795 5628 2280 110 0 3 chr10 68701919 68702228 -71614537 + AluSg SINE Alu 1 308 -2 528 258 94 88 chr10 68702228 68702443 -71614322 - L1MC4a LINE L1 -493 5628 5416 426 93 0 0 chr10 68702458 68702512 -71614253 - U6 snRNA snRNA -53 54 1 281 115 131 0 chr10 68702514 68702575 -71614190 - L1MC4a LINE L1 -2370 5438 5370 * 2006 140 56 59 chr10 68702574 68702901 -71613864 - L1MB8 LINE L1 -6 6172 5846 1884 129 13 32 chr10 68702901 68703211 -71613554 - AluJo SINE Alu -8 304 1 2006 140 56 59 chr10 68703211 68703222 -71613543 - L1MB8 LINE L1 -332 5846 5836 2236 100 7 10 chr10 68703222 68703531 -71613234 - AluSp SINE Alu 0 313 6 2006 140 56 59 chr10 68703531 68703645 -71613120 - L1MB8 LINE L1 -342 5836 5724 2524 71 0 7 chr10 68703689 68703999 -71612766 + AluY SINE Alu 1 308 -3 1620 201 0 0 chr10 68704328 68704602 -71612163 + AluJo SINE Alu 1 274 -38 2331 106 0 6 chr10 68704693 68705005 -71611760 + AluSx SINE Alu 1 310 -2 954 124 72 0 chr10 68705077 68705230 -71611535 + AluSg/x SINE Alu 139 302 -8 710 235 18 6 chr10 68705413 68705579 -71611186 - MER5B DNA MER1_type -10 168 1 1056 252 121 45 chr10 68707178 68707223 -71609542 + Charlie2a DNA MER1_type 32 72 -2790 2295 84 7 3 chr10 68707223 68707519 -71609246 - AluSg SINE Alu -13 297 1 1056 252 121 45 chr10 68707519 68707913 -71608852 + Charlie2a DNA MER1_type 72 504 -2358 3661 133 121 58 chr10 68707915 68708096 -71608669 + LTR39 LTR ERV1 1 169 -614 2263 115 0 10 chr10 68708096 68708401 -71608364 + AluSp SINE Alu 1 302 -11 3661 133 121 58 chr10 68708401 68708807 -71607958 + LTR39 LTR ERV1 169 646 -137 1857 149 38 3 chr10 68708807 68709095 -71607670 + AluJo SINE Alu 1 298 -14 3661 133 121 58 chr10 68709095 68709243 -71607522 + LTR39 LTR ERV1 646 783 0 602 214 71 0 chr10 68709249 68709375 -71607390 - FAM SINE Alu -47 138 4 814 162 7 7 chr10 68709439 68709616 -71607149 - FRAM SINE Alu 0 187 11 1580 228 131 51 chr10 68709683 68710231 -71606534 - MLT1E LTR MaLR 0 593 2 654 205 11 120 chr10 68710231 68710331 -71606434 + Charlie2a DNA MER1_type 951 1060 -1802 2213 117 0 0 chr10 68710331 68710612 -71606153 + AluSx SINE Alu 1 281 -31 190 0 67 0 chr10 68710614 68710644 -71606121 + (TA)n Simple_repeat Simple_repeat 2 33 0 654 205 11 120 chr10 68710644 68710822 -71605943 + Charlie2a DNA MER1_type 1061 1201 -1661 1701 148 0 0 chr10 68710844 68711094 -71605671 - AluSx SINE Alu -17 295 46 2132 112 24 3 chr10 68711182 68711476 -71605289 + AluSx SINE Alu 1 300 -12 2941 167 152 37 chr10 68711502 68712063 -71604702 + Charlie2a DNA MER1_type 1582 2268 -594 2128 113 3 0 chr10 68712063 68712378 -71604387 - AluSq SINE Alu 0 316 1 2941 167 152 37 chr10 68712378 68712629 -71604136 + Charlie2a DNA MER1_type 2268 2489 -373 2388 96 0 0 chr10 68712664 68712965 -71603800 - AluSx SINE Alu -11 301 1 2436 201 94 64 chr10 68713038 68713290 -71603475 + L1M4 LINE L1 3548 3791 -2355 1815 144 12 50 chr10 68713290 68713419 -71603346 + AluJo SINE Alu 1 133 -179 1486 195 18 18 chr10 68713419 68713602 -71603163 - AluJo SINE Alu 0 309 124 207 0 0 0 chr10 68713602 68713625 -71603140 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1486 195 18 18 chr10 68713625 68713750 -71603015 - AluJo SINE Alu -184 125 1 1815 144 12 50 chr10 68713750 68713938 -71602827 + AluJo SINE Alu 133 307 -5 2116 99 0 87 chr10 68713941 68714274 -71602491 + AluSq SINE Alu 1 304 -9 2436 201 94 64 chr10 68714274 68714495 -71602270 + L1M4 LINE L1 3792 4005 -2141 1743 161 36 7 chr10 68714495 68714775 -71601990 + AluJo SINE Alu 1 288 -24 2436 201 94 64 chr10 68714775 68715064 -71601701 + L1M4 LINE L1 4005 4338 -1808 775 136 17 90 chr10 68715066 68715088 -71601677 + L1MA7 LINE L1 6034 6056 -235 2569 58 0 0 chr10 68715088 68715383 -71601382 - AluY SINE Alu -16 295 1 775 136 17 90 chr10 68715383 68715525 -71601240 + L1MA7 LINE L1 6056 6187 -104 2364 108 0 0 chr10 68715525 68715831 -71600934 - AluSg SINE Alu -4 306 1 775 136 17 90 chr10 68715831 68715842 -71600923 + L1MA7 LINE L1 6187 6197 -94 1639 134 115 7 chr10 68715842 68716111 -71600654 - AluSg1 SINE Alu -11 298 1 641 165 17 102 chr10 68716111 68716209 -71600556 + L1M4 LINE L1 4677 4755 -1391 2329 107 0 0 chr10 68716209 68716517 -71600248 + AluSc SINE Alu 1 308 -1 641 165 17 102 chr10 68716517 68716594 -71600171 + L1M4 LINE L1 4755 4837 -1309 2231 96 14 0 chr10 68716612 68716904 -71599861 - AluSg SINE Alu -14 296 1 1233 137 0 0 chr10 68716904 68717086 -71599679 + AluSg/x SINE Alu 120 301 -11 744 233 27 47 chr10 68717087 68717219 -71599546 + L1M4 LINE L1 5036 5169 -977 2117 129 0 0 chr10 68717219 68717521 -71599244 + AluSx SINE Alu 3 304 -8 744 233 27 47 chr10 68717521 68717638 -71599127 + L1M4 LINE L1 5169 5280 -866 2519 71 0 3 chr10 68717638 68717946 -71598819 + AluY SINE Alu 1 307 -4 744 233 27 47 chr10 68717946 68717971 -71598794 + L1M4 LINE L1 5280 5304 -842 2021 97 34 4 chr10 68718582 68718849 -71597916 - AluSx SINE Alu -37 275 1 356 257 91 27 chr10 68718855 68719042 -71597723 - L1MC/D LINE L1 -2341 5467 5269 932 216 22 36 chr10 68719251 68719473 -71597292 - MER20 DNA MER1_type 0 219 1 1366 187 12 12 chr10 68719644 68719885 -71596880 + AluJo SINE Alu 50 290 -22 2413 94 0 0 chr10 68720240 68720539 -71596226 - AluSg SINE Alu -11 299 1 1811 168 0 46 chr10 68720568 68720748 -71596017 - AluJb SINE Alu 0 312 152 2267 111 0 0 chr10 68720748 68721045 -71595720 - AluSg SINE Alu -13 297 1 1811 168 0 46 chr10 68721045 68721191 -71595574 - AluJb SINE Alu -160 152 1 2167 127 0 9 chr10 68721224 68721539 -71595226 + AluSx SINE Alu 1 312 0 1633 134 68 119 chr10 68721564 68721949 -71594816 - LTR56 LTR ERV1 0 445 87 1656 171 4 4 chr10 68721949 68722218 -71594547 - AluJb SINE Alu -43 269 1 1633 134 68 119 chr10 68722218 68722301 -71594464 - LTR56 LTR ERV1 -358 87 1 39 0 0 20 chr10 68722315 68722335 -71594430 + AT_rich Low_complexity Low_complexity 1 20 -29 2205 115 0 0 chr10 68722335 68722623 -71594142 + AluSg SINE Alu 1 288 -22 39 0 0 20 chr10 68722623 68722652 -71594113 + AT_rich Low_complexity Low_complexity 20 49 0 2458 80 0 3 chr10 68722768 68723080 -71593685 - AluY SINE Alu 0 311 1 807 128 8 0 chr10 68723080 68723197 -71593568 - AluSp SINE Alu -177 136 19 1509 149 112 4 chr10 68723363 68723631 -71593134 - AluSg1 SINE Alu -12 297 1 2129 125 0 7 chr10 68723645 68723942 -71592823 - AluSx SINE Alu -15 297 3 2413 74 3 3 chr10 68723949 68724246 -71592519 - AluY SINE Alu -14 297 1 1616 205 3 0 chr10 68724249 68724542 -71592223 - AluJo SINE Alu -18 294 1 26 64 0 0 chr10 68724588 68724635 -71592130 + AT_rich Low_complexity Low_complexity 1 47 0 313 291 74 34 chr10 68724648 68724744 -71592021 - L1MC/D LINE L1 -1051 5095 4989 2065 111 10 23 chr10 68724744 68725050 -71591715 - AluSp SINE Alu -11 302 1 313 291 74 34 chr10 68725050 68725101 -71591664 - L1MC/D LINE L1 -1157 4989 4942 212 59 29 0 chr10 68725198 68725232 -71591533 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2493 61 0 0 chr10 68725236 68725530 -71591235 - AluY SINE Alu -16 295 2 2355 100 0 3 chr10 68725586 68725895 -71590870 - AluSq SINE Alu -5 308 1 1139 98 0 23 chr10 68726429 68726538 -71590227 - L1PA8 LINE L1 -8 6164 6059 2449 73 3 0 chr10 68726538 68726840 -71589925 - AluSp SINE Alu -10 303 1 1139 98 0 23 chr10 68726840 68726903 -71589862 - L1PA8 LINE L1 -113 6059 5996 200 275 150 58 chr10 68726995 68727115 -71589650 - MIR3 SINE MIR -28 180 50 204 308 145 8 chr10 68727520 68727637 -71589128 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 68728101 68728123 -71588642 + GC_rich Low_complexity Low_complexity 1 22 0 192 89 0 71 chr10 68728569 68728625 -71588140 + (CGG)n Simple_repeat Simple_repeat 3 54 0 232 211 18 0 chr10 68728723 68728780 -71587985 + (CGA)n Simple_repeat Simple_repeat 3 60 0 218 143 0 41 chr10 68729118 68729167 -71587598 + (TTTTC)n Simple_repeat Simple_repeat 5 51 0 2496 59 10 0 chr10 68729578 68729881 -71586884 - AluSc SINE Alu -3 306 1 1545 132 140 0 chr10 68729951 68730216 -71586549 + AluJo SINE Alu 1 302 0 2410 95 0 6 chr10 68730497 68730812 -71585953 - AluSp SINE Alu 0 313 1 2247 91 3 0 chr10 68731215 68731512 -71585253 - AluSp SINE Alu -11 302 5 565 302 55 17 chr10 68731554 68731789 -71584976 + L2 LINE L2 3070 3313 0 180 0 0 0 chr10 68731941 68731961 -71584804 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 554 155 0 0 chr10 68733616 68733713 -71583052 - AluJb SINE Alu -8 304 208 2202 98 0 0 chr10 68733720 68733994 -71582771 - AluSg SINE Alu -36 274 1 1637 174 50 0 chr10 68734108 68734390 -71582375 + AluJb SINE Alu 6 301 -11 2410 93 0 0 chr10 68734390 68734700 -71582065 + AluY SINE Alu 1 311 0 743 158 73 161 chr10 68735681 68735929 -71580836 + MER33 DNA MER1_type 2 270 -2315 1628 179 14 7 chr10 68735929 68736214 -71580551 + AluJo SINE Alu 1 287 -25 743 158 73 161 chr10 68736214 68736239 -71580526 + MER33 DNA MER1_type 270 296 -2289 2235 116 0 0 chr10 68736239 68736542 -71580223 - AluSx SINE Alu -9 303 1 743 158 73 161 chr10 68736542 68736621 -71580144 + MER33 DNA MER1_type 296 324 0 2347 86 0 3 chr10 68736773 68737087 -71579678 - L1PA8 LINE L1 -4 6168 5856 2125 120 0 7 chr10 68737182 68737482 -71579283 - AluSg SINE Alu -11 299 2 637 222 0 8 chr10 68737637 68737754 -71579011 + FLAM_C SINE Alu 5 120 -23 1948 121 45 3 chr10 68738346 68738636 -71578129 - AluSc SINE Alu -7 302 1 1633 117 0 12 chr10 68738780 68739020 -71577745 + AluSq SINE Alu 3 239 -74 2264 95 20 3 chr10 68739374 68739679 -71577086 - AluSq SINE Alu -3 310 1 667 173 129 104 chr10 68739753 68739791 -71576974 - MER20 DNA MER1_type -4 215 179 1149 194 82 61 chr10 68739791 68740084 -71576681 - AluJo SINE Alu -3 299 1 667 173 129 104 chr10 68740084 68740154 -71576611 - MER20 DNA MER1_type -40 179 112 1740 117 139 15 chr10 68740154 68740428 -71576337 + AluSx SINE Alu 1 308 -4 667 173 129 104 chr10 68740428 68740520 -71576245 - MER20 DNA MER1_type -107 112 9 1868 139 21 4 chr10 68740529 68740810 -71575955 + AluSx SINE Alu 11 296 -16 1803 124 75 3 chr10 68740926 68741071 -71575694 - AluSq SINE Alu -11 302 169 1685 121 17 0 chr10 68741071 68741302 -71575463 - AluSg SINE Alu -75 235 1 1803 124 75 3 chr10 68741302 68741438 -71575327 - AluSq SINE Alu -144 169 1 207 0 0 0 chr10 68741589 68741612 -71575153 + (T)n Simple_repeat Simple_repeat 1 23 0 2292 93 33 0 chr10 68741629 68741929 -71574836 + AluSg SINE Alu 1 310 0 868 190 6 0 chr10 68742330 68742488 -71574277 + FRAM SINE Alu 1 159 -7 321 155 0 84 chr10 68742816 68742887 -71573878 + AluS SINE Alu 1 65 -243 38 22 0 0 chr10 68742943 68742988 -71573777 + AT_rich Low_complexity Low_complexity 1 45 0 251 279 84 32 chr10 68743239 68743393 -71573372 - L1MC/D LINE L1 -1925 5883 5722 2097 110 7 3 chr10 68743443 68743733 -71573032 + AluSx SINE Alu 1 291 -21 27 0 0 0 chr10 68743736 68743763 -71573002 + AT_rich Low_complexity Low_complexity 1 27 0 2090 116 7 3 chr10 68743775 68744085 -71572680 - AluSx SINE Alu 0 311 1 1582 185 7 11 chr10 68744098 68744374 -71572391 - AluJo SINE Alu -27 285 11 934 151 141 16 chr10 68744802 68744987 -71571778 - AluJo SINE Alu -15 297 90 382 218 0 59 chr10 68745109 68745210 -71571555 - MER58C DNA MER1_type -3 212 118 362 213 13 0 chr10 68745368 68745443 -71571322 + MER58 DNA MER1_type 1 76 -139 1042 103 146 19 chr10 68745461 68745621 -71571144 - L1MA8 LINE L1 -7 6284 6089 2481 71 3 0 chr10 68745621 68745929 -71570836 - AluSq SINE Alu -4 309 1 1042 103 146 19 chr10 68745929 68745981 -71570784 - L1MA8 LINE L1 -202 6089 6045 480 206 79 16 chr10 68746024 68746150 -71570615 + MER58 DNA MER1_type 88 221 -120 2034 112 28 11 chr10 68746452 68746738 -71570027 + AluSx SINE Alu 1 291 -21 725 228 0 7 chr10 68746750 68746899 -71569866 - FAM SINE Alu -37 148 1 2260 91 3 13 chr10 68747029 68747327 -71569438 - AluY SINE Alu -16 295 1 1799 152 9 32 chr10 68747758 68748074 -71568691 - AluJb SINE Alu 0 312 4 2476 71 7 0 chr10 68748203 68748500 -71568265 + AluSp SINE Alu 1 299 -14 628 189 82 36 chr10 68749348 68749614 -71567151 - L1MC4a LINE L1 -153 5968 5698 2127 128 13 0 chr10 68750852 68751158 -71565607 + AluSx SINE Alu 1 310 -2 2031 147 7 0 chr10 68752261 68752553 -71564212 + AluSx SINE Alu 1 294 -18 2156 113 3 0 chr10 68753214 68753514 -71563251 - AluSq SINE Alu -12 301 1 780 191 0 0 chr10 68753519 68753650 -71563115 - FLAM_A SINE Alu -2 131 1 2101 132 0 0 chr10 68753742 68754031 -71562734 + AluSx SINE Alu 11 299 -13 1507 198 20 13 chr10 68754834 68755132 -71561633 - AluJo SINE Alu -12 300 1 439 223 6 6 chr10 68755258 68755433 -71561332 + CT-rich Low_complexity Low_complexity 4 178 0 1741 106 70 8 chr10 68755447 68755703 -71561062 - AluSx SINE Alu -40 272 1 527 244 48 42 chr10 68755741 68755909 -71560856 - MIR SINE MIR -30 232 64 472 268 177 10 chr10 68756941 68757150 -71559615 - MIR SINE MIR -18 244 1 2447 97 0 0 chr10 68757699 68758009 -71558756 - AluSg SINE Alu 0 310 1 1650 168 0 64 chr10 68758338 68758665 -71558100 - AluSq SINE Alu -7 306 1 299 182 182 11 chr10 68759520 68759608 -71557157 - MIR SINE MIR -113 149 47 676 148 0 9 chr10 68759644 68759752 -71557013 - FLAM_A SINE Alu -20 122 16 23 0 0 0 chr10 68760430 68760453 -71556312 + AT_rich Low_complexity Low_complexity 1 23 0 2204 96 7 0 chr10 68762570 68762863 -71553902 + AluSx SINE Alu 1 295 -17 323 209 105 0 chr10 68763196 68763282 -71553483 + MER104 DNA Tc2 72 166 -14 473 277 50 14 chr10 68763498 68763639 -71553126 - MER5B DNA MER1_type -30 148 3 2012 127 6 16 chr10 68764159 68764474 -71552291 - AluSx SINE Alu 0 312 1 256 220 17 0 chr10 68765212 68765271 -71551494 - MER46C DNA MER2_type 0 338 279 355 202 160 8 chr10 68765316 68765435 -71551330 - MER46C DNA MER2_type -200 138 2 31 0 0 0 chr10 68765589 68765620 -71551145 + AT_rich Low_complexity Low_complexity 1 31 0 201 238 0 0 chr10 68766990 68767032 -71549733 + L2 LINE L2 3227 3268 -4 285 253 24 12 chr10 68767036 68767119 -71549646 + MARNA DNA Mariner 137 220 -366 1059 124 98 16 chr10 68767205 68767398 -71549367 - AluJb SINE Alu -17 295 87 1894 138 26 35 chr10 68767735 68767929 -71548836 - MER2 DNA MER2_type 0 345 154 1963 128 73 9 chr10 68767929 68768256 -71548509 - MER7A DNA MER2_type 0 346 1 1894 138 26 35 chr10 68768256 68768408 -71548357 - MER2 DNA MER2_type -191 154 2 1998 180 144 34 chr10 68769244 68769716 -71547049 + MLT1F LTR MaLR 7 530 -12 2382 95 0 6 chr10 68769752 68770067 -71546698 + AluSq SINE Alu 1 313 0 291 272 127 76 chr10 68770139 68770297 -71546468 + L2 LINE L2 2867 3032 -240 301 239 177 35 chr10 68770306 68770419 -71546346 - L2 LINE L2 0 3313 3185 247 242 8 153 chr10 68770524 68770648 -71546117 + L2 LINE L2 3201 3306 -7 468 0 0 0 chr10 68771019 68771071 -71545694 + (TA)n Simple_repeat Simple_repeat 2 53 0 2318 92 0 3 chr10 68771071 68771364 -71545401 - AluSc SINE Alu -17 292 1 1059 251 117 19 chr10 68771448 68771874 -71544891 - L2 LINE L2 -40 3273 2800 410 278 7 40 chr10 68771903 68772054 -71544711 - HAL1 LINE L1 -1749 758 613 581 269 87 97 chr10 68772122 68772280 -71544485 - HAL1 LINE L1 -2109 398 240 2141 103 7 7 chr10 68772280 68772571 -71544194 + AluSg SINE Alu 1 291 -19 581 269 87 97 chr10 68772571 68772814 -71543951 - HAL1 LINE L1 -2267 240 1 1800 230 60 84 chr10 68772840 68773165 -71543600 - L1ME1 LINE L1 -17 6149 5818 1817 159 28 0 chr10 68773165 68773454 -71543311 - AluJb SINE Alu -15 297 1 2320 56 28 3 chr10 68773459 68773745 -71543020 - AluSp SINE Alu -20 293 1 1800 230 60 84 chr10 68773745 68773889 -71542876 - L1ME1 LINE L1 -352 5814 5668 654 159 14 28 chr10 68773889 68774034 -71542731 - L1MB2 LINE L1 -7 6164 6022 1800 230 60 84 chr10 68774034 68774292 -71542473 - L1ME1 LINE L1 -498 5668 5433 1601 124 0 0 chr10 68774401 68774619 -71542146 - AluSx SINE Alu -94 218 1 1915 106 17 20 chr10 68774630 68774923 -71541842 - AluSc SINE Alu -17 292 1 2070 84 0 0 chr10 68775113 68775364 -71541401 - AluSx SINE Alu -61 251 1 1207 193 6 111 chr10 68775401 68775603 -71541162 - AluJo SINE Alu -15 297 142 2177 113 3 0 chr10 68775603 68775896 -71540869 - AluSx SINE Alu -18 294 1 1207 193 6 111 chr10 68775896 68776025 -71540740 - AluJo SINE Alu -170 142 1 21 0 0 0 chr10 68776707 68776728 -71540037 + AT_rich Low_complexity Low_complexity 1 21 0 231 180 0 0 chr10 68777313 68777363 -71539402 - HAL1 LINE L1 -1 2506 2457 695 291 44 5 chr10 68777371 68777574 -71539191 - MIR SINE MIR -2 260 50 264 246 272 15 chr10 68777680 68777952 -71538813 - HAL1 LINE L1 -115 2392 2051 1176 244 209 21 chr10 68777956 68778570 -71538195 - HAL1 LINE L1 -508 1999 1271 2137 118 0 0 chr10 68778787 68779084 -71537681 - AluY SINE Alu -14 297 1 476 311 57 79 chr10 68779162 68779619 -71537146 - HAL1 LINE L1 -1947 560 114 24 0 0 0 chr10 68779876 68779900 -71536865 + AT_rich Low_complexity Low_complexity 1 24 0 2191 111 0 3 chr10 68781322 68781620 -71535145 - AluSx SINE Alu -13 299 3 22 0 0 0 chr10 68781777 68781799 -71534966 + AT_rich Low_complexity Low_complexity 1 22 0 2311 104 7 0 chr10 68781801 68782108 -71534657 + AluSc SINE Alu 1 309 0 2343 101 0 0 chr10 68782304 68782610 -71534155 + AluSg SINE Alu 1 306 -4 466 191 159 8 chr10 68782992 68783118 -71533647 + MIR SINE MIR 113 257 -5 198 0 0 0 chr10 68783559 68783581 -71533184 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2120 89 11 14 chr10 68783585 68783866 -71532899 - AluSg SINE Alu -30 280 1 30 45 0 0 chr10 68783879 68783923 -71532842 + AT_rich Low_complexity Low_complexity 1 44 0 2015 95 3 82 chr10 68784064 68784380 -71532385 - AluSx SINE Alu -16 296 6 235 240 89 34 chr10 68784797 68784943 -71531822 - L1ME4a LINE L1 -4 6117 5964 433 197 76 8 chr10 68785070 68785202 -71531563 - L1ME4a LINE L1 -1 6120 5980 243 88 73 176 chr10 68785270 68785310 -71531455 - L1ME4a LINE L1 -258 5863 5831 1975 105 84 3 chr10 68785310 68785595 -71531170 - AluSx SINE Alu -4 308 1 243 88 73 176 chr10 68785595 68785622 -71531143 - L1ME4a LINE L1 -290 5831 5803 511 234 0 31 chr10 68785857 68785985 -71530780 + MIR SINE MIR 139 262 0 2181 93 4 0 chr10 68786146 68786445 -71530320 - AluSp SINE Alu 0 305 6 306 307 59 55 chr10 68786878 68787080 -71529685 + HAL1 LINE L1 10 212 -2295 329 306 87 35 chr10 68787247 68787420 -71529345 + HAL1 LINE L1 454 635 -1872 13673 131 45 25 chr10 68787502 68789642 -71527123 + L1M1 LINE L1 1369 3465 -4100 1560 175 23 0 chr10 68789642 68789899 -71526866 + AluJb SINE Alu 33 295 -17 13673 131 45 25 chr10 68789899 68789981 -71526784 + L1M1 LINE L1 3465 3544 -4021 462 18 0 0 chr10 68789981 68790036 -71526729 + (CA)n Simple_repeat Simple_repeat 2 56 0 13673 131 45 25 chr10 68790036 68790265 -71526500 + L1M1 LINE L1 3544 3767 -3798 2099 115 0 4 chr10 68790265 68790564 -71526201 + AluSc SINE Alu 1 298 0 13673 131 45 25 chr10 68790564 68790866 -71525899 + L1M1 LINE L1 3767 4169 -3396 2317 202 44 146 chr10 68790886 68791495 -71525270 + L1P5 LINE L1 2244 2913 -3238 1045 85 0 0 chr10 68791495 68791624 -71525141 - AluSg SINE Alu -179 131 3 2317 202 44 146 chr10 68791624 68792276 -71524489 + L1P5 LINE L1 2913 3630 -2521 1979 145 0 0 chr10 68792276 68792559 -71524206 + AluSx SINE Alu 1 283 -29 2317 202 44 146 chr10 68792559 68792609 -71524156 + L1P5 LINE L1 3630 3683 -2468 2235 103 0 25 chr10 68792609 68792729 -71524036 + AluY SINE Alu 1 122 -189 216 0 0 0 chr10 68792729 68792753 -71524012 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2235 103 0 25 chr10 68792753 68792951 -71523814 + AluY SINE Alu 122 311 0 2317 202 44 146 chr10 68792951 68793382 -71523383 + L1P5 LINE L1 3683 4156 -1995 2005 131 29 10 chr10 68793382 68793688 -71523077 + AluSx SINE Alu 1 312 0 2317 202 44 146 chr10 68793688 68793826 -71522939 + L1P5 LINE L1 4156 5607 -544 2308 99 3 0 chr10 68793919 68794213 -71522552 - AluSx SINE Alu -17 295 1 517 282 36 15 chr10 68794227 68794422 -71522343 + L1MC4 LINE L1 6471 6669 -1373 2163 99 0 3 chr10 68794570 68794873 -71521892 + AluY SINE Alu 1 302 -9 446 197 87 31 chr10 68794880 68795007 -71521758 - L1MD3 LINE L1 -33 7949 7642 1268 159 88 115 chr10 68795381 68795860 -71520905 + L1MC5 LINE L1 6773 7238 -723 700 182 14 47 chr10 68795995 68796143 -71520622 - MER58B DNA MER1_type -3 338 196 32 43 0 0 chr10 68796786 68796832 -71519933 + AT_rich Low_complexity Low_complexity 1 46 0 2259 110 3 0 chr10 68797442 68797750 -71519015 + AluSq SINE Alu 1 309 -4 25 0 0 0 chr10 68798058 68798083 -71518682 + AT_rich Low_complexity Low_complexity 1 25 0 234 283 238 42 chr10 68799587 68799765 -71517000 - L3 LINE CR1 -5 1572 1430 2077 119 0 3 chr10 68799765 68800059 -71516706 - AluSg SINE Alu -17 293 1 234 283 238 42 chr10 68800059 68800237 -71516528 - L3 LINE CR1 -147 1430 1146 1245 244 121 13 chr10 68801909 68802298 -71514467 + MER77 LTR ERV1 57 487 -118 2318 79 10 0 chr10 68802344 68802635 -71514130 - AluSp SINE Alu -19 294 1 638 189 15 35 chr10 68803450 68803605 -71513160 + MER77 LTR ERV1 466 599 -6 562 198 17 9 chr10 68804010 68804126 -71512639 - L1MC1 LINE L1 -11 6322 6206 2159 101 24 0 chr10 68805092 68805379 -71511386 - AluSx SINE Alu -16 296 3 561 291 199 0 chr10 68805930 68806236 -71510529 + L2 LINE L2 1705 2071 -1243 600 325 148 36 chr10 68806237 68806635 -71510130 + L2 LINE L2 2460 2812 -501 2262 107 3 3 chr10 68806635 68806943 -71509822 - AluSg SINE Alu -2 308 1 600 325 148 36 chr10 68806943 68807311 -71509454 + L2 LINE L2 2812 3313 0 182 244 134 94 chr10 68807494 68807621 -71509144 - L2 LINE L2 -7 3306 3175 1534 152 4 4 chr10 68807916 68808147 -71508618 - AluSx SINE Alu -79 233 3 200 35 35 0 chr10 68808299 68808328 -71508437 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2441 81 0 0 chr10 68808729 68809025 -71507740 - AluY SINE Alu -15 296 1 251 296 14 14 chr10 68809087 68809158 -71507607 - L2 LINE L2 -1 3271 3201 453 279 104 5 chr10 68809426 68809627 -71507138 + L1MC4 LINE L1 7275 7495 -547 * 462 242 29 17 chr10 68809600 68809825 -71506940 + L1MC4 LINE L1 7300 7626 -416 442 224 14 88 chr10 68809828 68809975 -71506790 + L1ME LINE L1 873 1008 -5923 327 260 55 31 chr10 68810034 68810161 -71506604 + L1ME LINE L1 1168 1297 -5634 207 0 0 0 chr10 68810179 68810202 -71506563 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2343 84 0 10 chr10 68810249 68810546 -71506219 - AluY SINE Alu -17 294 1 1073 238 128 8 chr10 68810567 68811019 -71505746 + L1ME LINE L1 3150 3676 -3265 1994 277 136 62 chr10 68811028 68812181 -71504584 + L1ME LINE L1 110 1363 -5060 2111 140 0 6 chr10 68812181 68812495 -71504270 + AluSx SINE Alu 1 312 0 1994 277 136 62 chr10 68812495 68812580 -71504185 + L1ME LINE L1 1363 1440 -4983 702 232 109 6 chr10 68812581 68812939 -71503826 + L1ME LINE L1 3716 4110 -2831 2357 214 98 68 chr10 68812952 68813803 -71502962 + L1ME LINE L1 4221 5045 -1896 2164 153 0 0 chr10 68813803 68814111 -71502654 + AluSq SINE Alu 1 308 -5 2450 70 10 13 chr10 68814111 68814425 -71502340 + AluSp SINE Alu 1 313 0 2357 214 98 68 chr10 68814425 68814606 -71502159 + L1ME LINE L1 5044 5285 -1656 559 277 74 27 chr10 68814709 68815045 -71501720 + L1MC4 LINE L1 7691 8042 0 192 200 29 0 chr10 68815086 68815121 -71501644 - L2 LINE L2 -334 2979 2944 673 214 0 0 chr10 68815511 68815637 -71501128 + AluSp/q SINE Alu 172 297 -16 337 256 122 56 chr10 68815683 68815863 -71500902 - MIR SINE MIR -50 212 21 1604 112 5 5 chr10 68815868 68816083 -71500682 - AluSq SINE Alu -98 215 1 838 182 62 84 chr10 68816402 68816627 -71500138 + MER58A DNA MER1_type 2 221 -3 17473 165 54 30 chr10 68816923 68818132 -71498633 + L1M1 LINE L1 17 1195 -6370 1874 160 3 0 chr10 68818132 68818419 -71498346 + AluJb SINE Alu 1 288 -24 2038 109 41 3 chr10 68818426 68818719 -71498046 + AluSx SINE Alu 1 304 -8 17473 165 54 30 chr10 68818719 68820171 -71496594 + L1M1 LINE L1 1200 2616 -4949 1744 78 0 5 chr10 68820171 68820389 -71496376 + AluY SINE Alu 85 301 -10 17473 165 54 30 chr10 68820389 68820553 -71496212 + L1M1 LINE L1 2616 2775 -4790 2107 78 3 71 chr10 68820553 68820861 -71495904 - AluSp SINE Alu -22 291 5 17473 165 54 30 chr10 68820861 68822106 -71494659 + L1M1 LINE L1 2775 4193 -3372 1696 146 59 17 chr10 68822107 68822395 -71494370 + AluSx SINE Alu 1 300 -12 4184 143 47 17 chr10 68822397 68823276 -71493489 + L1ME LINE L1 5269 6173 -768 1633 109 4 4 chr10 68823278 68823508 -71493257 + AluSx SINE Alu 1 230 -82 2545 123 10 2 chr10 68823514 68823930 -71492835 + L1MA2 LINE L1 5352 5770 -535 2351 89 0 25 chr10 68823930 68824246 -71492519 + AluY SINE Alu 1 308 -3 1159 143 0 0 chr10 68824246 68824407 -71492358 + AluSg/x SINE Alu 134 294 -18 1516 98 41 59 chr10 68824408 68824452 -71492313 + L1MA2 LINE L1 5765 5808 -496 2174 120 3 3 chr10 68824452 68824751 -71492014 + AluSx SINE Alu 1 299 -13 1516 98 41 59 chr10 68824751 68825020 -71491745 + L1MA2 LINE L1 5808 6231 -73 2201 113 0 20 chr10 68825020 68825321 -71491444 - AluSx SINE Alu -17 295 1 1516 98 41 59 chr10 68825321 68825392 -71491373 + L1MA2 LINE L1 6231 6302 -2 378 355 73 73 chr10 68825517 68825776 -71490989 + L2 LINE L2 3010 3268 -4 2151 118 3 14 chr10 68826792 68827088 -71489677 - AluSx SINE Alu -19 293 1 197 160 0 40 chr10 68830884 68830934 -71485831 + A-rich Low_complexity Low_complexity 3 50 0 201 167 0 0 chr10 68831449 68831485 -71485280 + A-rich Low_complexity Low_complexity 1 36 0 29 28 0 0 chr10 68831931 68831967 -71484798 + AT_rich Low_complexity Low_complexity 1 36 0 1657 152 65 7 chr10 68832337 68832613 -71484152 - AluJb SINE Alu -20 292 1 2287 102 7 7 chr10 68833494 68833799 -71482966 + AluSx SINE Alu 1 305 -7 942 163 36 6 chr10 68833804 68833970 -71482795 + FAM SINE Alu 2 172 -3 2319 113 3 0 chr10 68834853 68835163 -71481602 - AluSp SINE Alu -2 311 1 1673 104 155 0 chr10 68835166 68835417 -71481348 - AluSx SINE Alu -18 294 5 395 270 74 16 chr10 68835468 68835657 -71481108 - L1MC5 LINE L1 -516 7445 7246 384 283 16 68 chr10 68835856 68836047 -71480718 - L1ME LINE L1 -683 5438 5258 259 168 13 6 chr10 68836456 68836682 -71480083 + AluJo SINE Alu 2 261 -41 240 194 104 0 chr10 68836778 68836845 -71479920 + LTR37A LTR ERV1 46 119 -307 556 216 39 28 chr10 68836925 68837106 -71479659 - Charlie1 DNA MER1_type -19 2742 2560 1775 116 85 0 chr10 68837133 68837241 -71479524 + AluY SINE Alu 1 98 -209 188 0 74 0 chr10 68837241 68837268 -71479497 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1775 116 85 0 chr10 68837268 68837444 -71479321 + AluY SINE Alu 98 307 0 277 290 63 45 chr10 68837673 68837942 -71478823 + MER31-int LTR ERV1 2471 2744 -2192 593 148 16 25 chr10 68837977 68838099 -71478666 + MLT1B LTR MaLR 1 121 -269 313 241 0 0 chr10 68838261 68838319 -71478446 - MER2 DNA MER2_type -1 344 287 2287 94 10 0 chr10 68838328 68838627 -71478138 - AluSc SINE Alu -7 302 1 21 36 0 0 chr10 68838662 68838690 -71478075 + AT_rich Low_complexity Low_complexity 1 28 0 1708 171 10 0 chr10 68838860 68839170 -71477595 + AluSp SINE Alu 1 313 0 381 136 73 158 chr10 68839175 68839352 -71477413 + L1M4 LINE L1 4329 4490 -1656 559 277 74 27 chr10 68839455 68839791 -71476974 + L1MC4 LINE L1 7691 8042 0 192 200 29 0 chr10 68839832 68839867 -71476898 - L2 LINE L2 -334 2979 2944 200 309 18 0 chr10 68840307 68840362 -71476403 - L2 LINE L2 -825 2489 2434 2295 91 17 0 chr10 68840389 68840685 -71476080 + AluSc SINE Alu 1 301 -8 402 21 0 0 chr10 68840694 68840741 -71476024 + (CA)n Simple_repeat Simple_repeat 2 48 0 1090 82 0 0 chr10 68841521 68841655 -71475110 + AluSg1 SINE Alu 1 134 -175 1211 128 6 17 chr10 68841755 68841935 -71474830 + AluSg1 SINE Alu 119 296 -16 1997 124 32 3 chr10 68842119 68842402 -71474363 - AluSq SINE Alu -22 291 1 32 0 0 0 chr10 68842411 68842443 -71474322 + AT_rich Low_complexity Low_complexity 1 32 0 453 249 134 46 chr10 68842982 68843371 -71473394 + MER31-int LTR ERV1 3381 3803 -1133 865 158 0 0 chr10 68843397 68843524 -71473241 - FLAM_C SINE Alu -11 132 6 710 186 68 107 chr10 68843591 68843630 -71473135 + MER77 LTR ERV1 1 40 -565 2014 156 123 28 chr10 68843630 68843668 -71473097 + MLT1C LTR MaLR 4 37 -430 1943 139 10 3 chr10 68843668 68843963 -71472802 + AluJb SINE Alu 1 297 -15 2014 156 123 28 chr10 68843963 68844348 -71472417 + MLT1C LTR MaLR 37 467 0 710 186 68 107 chr10 68844348 68844460 -71472305 + MER77 LTR ERV1 40 141 -464 1919 178 0 3 chr10 68844460 68844758 -71472007 + AluJb SINE Alu 1 297 -15 710 186 68 107 chr10 68844758 68844857 -71471908 + MER77 LTR ERV1 141 242 -363 1725 178 102 5 chr10 68844941 68845362 -71471403 - L1MB4 LINE L1 0 6180 5719 2207 127 0 3 chr10 68845964 68846272 -71470493 - AluSx SINE Alu -5 307 1 5967 122 32 41 chr10 68846275 68846526 -71470239 - L1MA3 LINE L1 -1 7723 7471 2089 83 10 60 chr10 68846526 68846840 -71469925 - AluY SINE Alu -9 302 5 5967 122 32 41 chr10 68846840 68847952 -71468813 - L1MA3 LINE L1 -253 7471 6384 2283 117 21 27 chr10 68847952 68848327 -71468438 - THE1C LTR MaLR 0 375 3 5967 122 32 41 chr10 68848327 68848527 -71468238 - L1MA3 LINE L1 -1340 6384 6184 * 10434 151 48 24 chr10 68848521 68849077 -71467688 - L1MA3 LINE L1 -3608 3957 3416 1551 171 16 0 chr10 68849077 68849323 -71467442 - AluJo SINE Alu -14 298 49 10434 151 48 24 chr10 68849323 68849735 -71467030 - L1MA3 LINE L1 -4149 3416 3016 2295 92 10 19 chr10 68849735 68850049 -71466716 - AluSq SINE Alu -2 311 1 10434 151 48 24 chr10 68850049 68851074 -71465691 - L1MA3 LINE L1 -4549 3016 1892 2311 124 0 3 chr10 68851074 68851389 -71465376 - 7SLRNA srpRNA srpRNA -6 314 1 10434 151 48 24 chr10 68851389 68851769 -71464996 - L1MA3 LINE L1 -5673 1892 1523 788 119 137 24 chr10 68851798 68851966 -71464799 - LTR8A LTR ERV1 -97 630 444 24 0 0 0 chr10 68851967 68851991 -71464774 + AT_rich Low_complexity Low_complexity 1 24 0 892 147 13 0 chr10 68852039 68852189 -71464576 + L1MB2 LINE L1 5633 5784 -387 3318 118 9 93 chr10 68852189 68852312 -71464453 - Tigger1 DNA MER2_type -1 2417 2285 1811 161 0 20 chr10 68852312 68852611 -71464154 + AluSx SINE Alu 3 295 -17 3318 118 9 93 chr10 68852611 68852657 -71464108 - Tigger1 DNA MER2_type -133 2285 2237 693 194 31 8 chr10 68852657 68852786 -71463979 - FLAM_C SINE Alu -1 132 1 3318 118 9 93 chr10 68852786 68853282 -71463483 - Tigger1 DNA MER2_type -181 2237 1807 1080 112 59 5 chr10 68854265 68854452 -71462313 - Tigger1 DNA MER2_type -634 1784 1588 1265 162 72 22 chr10 68854453 68854675 -71462090 - AluJo SINE Alu -31 281 49 8459 126 44 23 chr10 68854675 68856176 -71460589 - Tigger1 DNA MER2_type -830 1588 57 554 68 12 228 chr10 68856210 68856372 -71460393 + Tigger1 DNA MER2_type 155 281 -2137 922 114 47 7 chr10 68856380 68856529 -71460236 + Tigger1 DNA MER2_type 1 155 -2263 * 1042 123 17 98 chr10 68856520 68856756 -71460009 + Tigger1 DNA MER2_type 2202 2418 0 1811 151 38 27 chr10 68856757 68857122 -71459643 + L1MB2 LINE L1 5801 6169 -2 288 189 0 0 chr10 68857256 68857309 -71459456 - L1MC4a LINE L1 -1900 5908 5856 991 270 60 25 chr10 68858338 68858838 -71457927 + MLT1H LTR MaLR 1 549 0 322 246 58 22 chr10 68858838 68858976 -71457789 - L1MEd LINE L1 -5881 238 96 255 167 0 0 chr10 68859125 68859167 -71457598 - MER5B DNA MER1_type 0 178 137 2117 129 0 0 chr10 68859194 68859481 -71457284 + AluSx SINE Alu 1 287 -25 2352 88 0 16 chr10 68859717 68860024 -71456741 - AluSc SINE Alu -7 302 1 1918 102 0 44 chr10 68860855 68861170 -71455595 - AluSx SINE Alu -11 301 1 870 261 97 33 chr10 68861170 68861829 -71454936 + L1ME3 LINE L1 3364 4064 -2082 584 237 134 65 chr10 68861979 68862368 -71454397 + L1ME3 LINE L1 4269 4717 -1429 2602 65 3 0 chr10 68862368 68862677 -71454088 - AluSp SINE Alu -3 310 1 584 237 134 65 chr10 68862677 68862898 -71453867 + L1ME3 LINE L1 4717 4921 -1225 5760 189 98 28 chr10 68862901 68863866 -71452899 + L1MB3 LINE L1 20 1116 -5268 2655 17 0 10 chr10 68863866 68864167 -71452598 + AluYa5 SINE Alu 1 298 -13 5760 189 98 28 chr10 68864167 68864606 -71452159 + L1MB3 LINE L1 1116 1523 -4861 1916 188 55 37 chr10 68864592 68864909 -71451856 + L1MB3 LINE L1 3969 4279 -2103 * 2271 103 3 0 chr10 68864909 68865210 -71451555 + AluSp SINE Alu 2 303 -10 1916 188 55 37 chr10 68865210 68865599 -71451166 + L1MB3 LINE L1 4279 4820 -1562 2148 106 3 0 chr10 68865599 68865925 -71450840 + AluSp SINE Alu 1 327 0 4519 176 28 28 chr10 68865929 68867109 -71449656 + L1MB3 LINE L1 5229 6410 -9 1028 279 112 27 chr10 68867117 68868080 -71448685 + L1ME3 LINE L1 4910 5959 -203 1113 180 22 40 chr10 68868408 68868636 -71448129 + AluJo SINE Alu 87 310 -2 1862 153 3 3 chr10 68869490 68869778 -71446987 - AluJo SINE Alu -24 288 1 1463 167 16 19 chr10 68869853 68869944 -71446821 + AluSq SINE Alu 47 137 -176 2175 93 7 0 chr10 68869944 68870235 -71446530 + AluY SINE Alu 1 293 -18 1463 167 16 19 chr10 68870235 68870401 -71446364 + AluSq SINE Alu 137 303 -10 22 70 0 0 chr10 68870402 68870445 -71446320 + AT_rich Low_complexity Low_complexity 1 43 0 400 246 42 124 chr10 68870622 68870952 -71445813 - L1MC5 LINE L1 -50 7911 7609 2115 123 0 3 chr10 68871027 68871319 -71445446 + AluSx SINE Alu 5 295 -17 258 113 28 14 chr10 68871320 68871391 -71445374 + (TA)n Simple_repeat Simple_repeat 1 72 0 1119 225 77 84 chr10 68871437 68872125 -71444640 - L1MC5 LINE L1 -743 7218 6542 1398 180 21 42 chr10 68872288 68872571 -71444194 + AluJo SINE Alu 18 294 -18 2166 133 0 3 chr10 68872591 68872893 -71443872 + AluSx SINE Alu 1 301 -11 278 147 53 0 chr10 68873046 68873121 -71443644 + (TA)n Simple_repeat Simple_repeat 1 79 0 2072 91 10 13 chr10 68873125 68873423 -71443342 - AluSg SINE Alu -13 297 1 764 216 167 26 chr10 68873518 68873543 -71443222 - L1MC5 LINE L1 -230 5891 5871 1957 140 7 3 chr10 68873543 68873850 -71442915 + AluSx SINE Alu 1 308 -4 764 216 167 26 chr10 68873850 68874155 -71442610 - L1MC5 LINE L1 -250 5871 5611 229 238 60 48 chr10 68874179 68874263 -71442502 - L1MC5 LINE L1 -1564 4582 4498 445 93 80 13 chr10 68874858 68874933 -71441832 + MADE1 DNA Mariner 1 80 0 1923 135 7 7 chr10 68875146 68875435 -71441330 - AluSx SINE Alu -21 291 3 629 295 32 73 chr10 68877885 68878322 -71438443 + L2 LINE L2 2153 2571 -743 2190 104 7 17 chr10 68878543 68878842 -71437923 - AluSg SINE Alu -14 296 1 335 313 216 42 chr10 68878923 68879419 -71437346 + L2 LINE L2 2687 3261 -11 2316 80 0 13 chr10 68879419 68879721 -71437044 + AluY SINE Alu 1 298 -13 335 313 216 42 chr10 68879721 68879736 -71437029 + L2 LINE L2 3261 3272 0 26 30 0 0 chr10 68880141 68880174 -71436591 + AT_rich Low_complexity Low_complexity 1 33 0 2424 87 0 3 chr10 68880471 68880781 -71435984 - AluSx SINE Alu -2 310 2 875 203 183 20 chr10 68881029 68881284 -71435481 + L1MC1 LINE L1 4312 4641 -1505 252 59 0 0 chr10 68881284 68881318 -71435447 + (TG)n Simple_repeat Simple_repeat 2 35 0 875 203 183 20 chr10 68881318 68881412 -71435353 + L1MC1 LINE L1 4641 4718 -1428 1745 131 22 55 chr10 68882420 68882732 -71434033 + AluSx SINE Alu 11 312 0 23 33 0 0 chr10 68882925 68882955 -71433810 + AT_rich Low_complexity Low_complexity 1 30 0 410 290 97 11 chr10 68883321 68883497 -71433268 + L2 LINE L2 3117 3307 -6 21 36 0 0 chr10 68883859 68883887 -71432878 + AT_rich Low_complexity Low_complexity 1 28 0 2302 107 3 0 chr10 68883995 68884304 -71432461 + AluSg SINE Alu 1 310 0 23 33 0 0 chr10 68884321 68884351 -71432414 + AT_rich Low_complexity Low_complexity 1 30 0 2182 87 28 3 chr10 68885405 68885693 -71431072 - AluSg1 SINE Alu -14 295 1 1878 160 7 0 chr10 68885729 68886029 -71430736 + AluJb SINE Alu 1 302 -10 2051 129 0 7 chr10 68886947 68887249 -71429516 + AluSg SINE Alu 1 300 -10 1920 143 0 20 chr10 68888458 68888758 -71428007 + AluSx SINE Alu 6 299 -13 235 313 231 24 chr10 68889189 68889397 -71427368 + L3 LINE CR1 1310 1560 -17 225 289 66 0 chr10 68889930 68890006 -71426759 - L2 LINE L2 -50 3263 3183 1399 192 52 19 chr10 68890101 68890372 -71426393 + AluJb SINE Alu 3 282 -30 210 37 0 0 chr10 68890377 68890404 -71426361 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 230 194 42 56 chr10 68890755 68890827 -71425938 + L1ME3A LINE L1 6094 6164 -6 * 5389 157 46 27 chr10 68890820 68891333 -71425432 + L1MC1 LINE L1 5175 5677 -656 1934 149 20 3 chr10 68891333 68891634 -71425131 - AluJb SINE Alu -6 306 1 5389 157 46 27 chr10 68891634 68892252 -71424513 + L1MC1 LINE L1 5677 6328 -5 1194 248 157 45 chr10 68892279 68892762 -71424003 + L1MC4a LINE L1 5431 5967 -1841 760 167 77 2 chr10 68892796 68893028 -71423737 + AluSg SINE Alu 1 305 -7 1528 200 32 0 chr10 68893051 68893336 -71423429 + AluJb SINE Alu 4 297 -15 1492 174 57 7 chr10 68893339 68893620 -71423145 + AluSx SINE Alu 1 295 -17 25 31 0 0 chr10 68893765 68893797 -71422968 + AT_rich Low_complexity Low_complexity 1 32 0 193 207 69 52 chr10 68894368 68894426 -71422339 - MIR SINE MIR -2 260 202 180 77 0 0 chr10 68894516 68894542 -71422223 + (A)n Simple_repeat Simple_repeat 1 26 0 2477 54 0 47 chr10 68894756 68895073 -71421692 - AluY SINE Alu -9 302 1 1854 118 77 3 chr10 68895096 68895383 -71421382 - AluJb SINE Alu -4 308 1 3604 191 91 25 chr10 68895608 68896510 -71420255 - Looper DNA T2_type -278 1280 319 1121 212 0 0 chr10 68896510 68896713 -71420052 + MER82 DNA MER2_type 2 204 -449 822 246 26 39 chr10 68896708 68896725 -71420040 + MER82 DNA MER2_type 332 348 -305 * 1640 164 54 0 chr10 68896725 68897005 -71419760 - AluJb SINE Alu -17 295 1 822 246 26 39 chr10 68897005 68897219 -71419546 + MER82 DNA MER2_type 348 560 -93 1763 125 39 18 chr10 68897765 68898046 -71418719 - AluSx SINE Alu -13 299 13 36 40 0 0 chr10 68898135 68898185 -71418580 + AT_rich Low_complexity Low_complexity 1 50 0 1486 119 13 0 chr10 68898327 68898553 -71418212 - AluSg/x SINE Alu 0 310 82 356 231 127 30 chr10 68898917 68899051 -71417714 - MIR SINE MIR -4 258 112 2159 99 17 3 chr10 68899170 68899462 -71417303 - AluSx SINE Alu -16 296 1 186 350 67 8 chr10 68899764 68899884 -71416881 - L2 LINE L2 -5 3267 3141 202 312 21 21 chr10 68900183 68900276 -71416489 - MIR SINE MIR -128 134 42 1902 85 0 0 chr10 68900767 68901003 -71415762 + AluSg SINE Alu 10 245 -65 1694 145 28 4 chr10 68901138 68901393 -71415372 - AluSx SINE Alu -51 261 1 208 313 62 0 chr10 68901679 68901743 -71415022 + L2 LINE L2 3202 3269 -3 223 277 0 0 chr10 68901928 68901975 -71414790 - MIR SINE MIR -10 252 206 839 97 0 9 chr10 68901981 68902095 -71414670 - AluSc SINE Alu -12 297 185 450 284 52 0 chr10 68902099 68902233 -71414532 - MIR SINE MIR -90 172 32 270 271 109 35 chr10 68902275 68902504 -71414261 - L1MC4a LINE L1 -1693 6115 5870 386 323 74 4 chr10 68902578 68902835 -71413930 - L1MC4a LINE L1 -1487 4659 4385 504 147 5 38 chr10 68902852 68903036 -71413729 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 671 153 14 14 chr10 68903058 68903348 -71413417 + (TATAA)n Simple_repeat Simple_repeat 1 290 0 184 321 179 33 chr10 68903394 68903578 -71413187 + MIR SINE MIR 52 262 0 1961 131 0 56 chr10 68903611 68903931 -71412834 - AluSg SINE Alu -8 302 1 2162 84 0 0 chr10 68904678 68904953 -71411812 + AluY SINE Alu 35 309 -2 2401 90 0 6 chr10 68904989 68905301 -71411464 + AluSx SINE Alu 1 310 -2 2291 86 3 25 chr10 68905865 68906179 -71410586 + AluSg SINE Alu 1 307 -3 1892 148 7 7 chr10 68906611 68906901 -71409864 - AluSg SINE Alu -20 290 1 2110 118 0 3 chr10 68907049 68907336 -71409429 + AluSq SINE Alu 1 286 -27 1940 152 13 7 chr10 68907354 68907663 -71409102 + AluSx SINE Alu 1 311 -1 2029 131 0 23 chr10 68907665 68908013 -71408752 + AluSx SINE Alu 1 341 0 321 245 83 36 chr10 68908029 68908084 -71408681 + L1ME4a LINE L1 5695 5746 -375 2129 116 3 13 chr10 68908084 68908387 -71408378 + AluSg SINE Alu 1 300 -10 321 245 83 36 chr10 68908387 68908523 -71408242 + L1ME4a LINE L1 5746 5895 -226 21 57 0 0 chr10 68908763 68908798 -71407967 + AT_rich Low_complexity Low_complexity 1 35 0 1448 177 79 4 chr10 68908983 68909260 -71407505 + AluJb SINE Alu 1 298 -14 1582 178 0 20 chr10 68911464 68911595 -71405170 + AluJo SINE Alu 8 140 -172 2305 101 0 7 chr10 68911595 68911902 -71404863 + AluSx SINE Alu 1 305 -7 1582 178 0 20 chr10 68911902 68912074 -71404691 + AluJo SINE Alu 140 305 -7 455 252 55 36 chr10 68912171 68912349 -71404416 + MIR SINE MIR 22 206 -56 2135 100 0 0 chr10 68913154 68913468 -71403297 + AluY SINE Alu 1 314 0 2315 104 3 0 chr10 68913718 68914027 -71402738 + AluSq SINE Alu 1 310 -3 23 33 0 0 chr10 68916219 68916249 -71400516 + AT_rich Low_complexity Low_complexity 1 30 0 315 213 27 158 chr10 68918163 68918346 -71398419 + L1M2 LINE L1 808 966 -5883 226 302 0 40 chr10 68918603 68918729 -71398036 + G-rich Low_complexity Low_complexity 5 125 0 21 0 0 0 chr10 68918809 68918830 -71397935 + GC_rich Low_complexity Low_complexity 1 21 0 1729 133 93 4 chr10 68919487 68919794 -71396971 - AluSx SINE Alu 0 312 1 1839 163 93 34 chr10 68919865 68920234 -71396531 - MLT1C LTR MaLR 0 467 66 2365 63 3 13 chr10 68920234 68920534 -71396231 + AluSp SINE Alu 1 297 -16 1839 163 93 34 chr10 68920534 68920605 -71396160 - MLT1C LTR MaLR -401 66 1 1670 148 84 3 chr10 68920733 68921017 -71395748 - AluJb SINE Alu -5 307 1 199 337 168 0 chr10 68921807 68921902 -71394863 + MIR SINE MIR 152 262 0 23 0 0 0 chr10 68922006 68922029 -71394736 + AT_rich Low_complexity Low_complexity 1 23 0 430 200 116 26 chr10 68922129 68922284 -71394481 + L2 LINE L2 2995 3163 -150 512 261 36 12 chr10 68922333 68922498 -71394267 + L2 LINE L2 3128 3296 -17 1740 167 3 13 chr10 68922506 68922818 -71393947 + AluJb SINE Alu 1 309 -3 234 273 0 0 chr10 68922845 68922911 -71393854 + L1ME LINE L1 5533 5598 -523 267 81 0 0 chr10 68923023 68923060 -71393705 - L2 LINE L2 -4 3309 3273 2284 119 0 0 chr10 68923172 68923484 -71393281 + AluSq SINE Alu 1 312 -1 26 0 0 0 chr10 68923504 68923530 -71393235 + AT_rich Low_complexity Low_complexity 1 26 0 1169 203 75 80 chr10 68924196 68924588 -71392177 - MLT1C LTR MaLR 0 467 76 1988 140 31 34 chr10 68924588 68924937 -71391828 - MER7A DNA MER2_type 0 346 1 1169 203 75 80 chr10 68924937 68925008 -71391757 - MLT1C LTR MaLR -391 76 6 963 78 47 88 chr10 68925339 68925532 -71391233 - MLT1B LTR MaLR -204 186 2 2327 103 0 0 chr10 68925577 68925877 -71390888 + AluSx SINE Alu 1 300 -12 2053 111 3 42 chr10 68928086 68928393 -71388372 + AluSx SINE Alu 1 295 -17 21 71 0 0 chr10 68928403 68928445 -71388320 + AT_rich Low_complexity Low_complexity 1 42 0 2347 94 3 0 chr10 68928525 68928822 -71387943 - AluSg SINE Alu -12 298 1 232 297 182 30 chr10 68929351 68929516 -71387249 + L2 LINE L2 2551 2740 -574 335 295 123 51 chr10 68929554 68929886 -71386879 + L2 LINE L2 2856 3211 -61 1595 123 13 4 chr10 68929983 68930250 -71386515 - AluSx SINE Alu 0 314 46 234 337 59 10 chr10 68930733 68930834 -71385931 + L2 LINE L2 3155 3260 -12 274 341 12 12 chr10 68930860 68930945 -71385820 + L2 LINE L2 3183 3267 -5 1337 166 35 39 chr10 68932135 68932419 -71384346 - L1MB8 LINE L1 -6 6172 5890 1997 153 0 7 chr10 68932424 68932724 -71384041 - AluSx SINE Alu -14 298 1 227 31 31 0 chr10 68932724 68932756 -71384009 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2203 65 0 14 chr10 68932758 68933037 -71383728 - AluY SINE Alu -36 275 1 2305 95 0 7 chr10 68933563 68933857 -71382908 - AluSx SINE Alu -20 292 1 247 208 0 0 chr10 68934712 68934765 -71382000 + (TA)n Simple_repeat Simple_repeat 2 54 0 1934 149 7 3 chr10 68934786 68935088 -71381677 - AluJb SINE Alu -9 303 1 805 228 0 0 chr10 68935339 68935488 -71381277 + FRAM SINE Alu 12 160 -16 2332 95 0 13 chr10 68935601 68935907 -71380858 + AluSq SINE Alu 1 302 -11 361 298 48 80 chr10 68936124 68936312 -71380453 - MIR SINE MIR -30 232 51 763 179 0 35 chr10 68936425 68936570 -71380195 - AluJo SINE Alu -172 140 1 3364 131 20 52 chr10 68936738 68936849 -71379916 - MER41B LTR ERV1 -7 628 515 2269 78 0 60 chr10 68936849 68937180 -71379585 + AluY SINE Alu 1 311 0 3364 131 20 52 chr10 68937180 68937646 -71379119 - MER41B LTR ERV1 -120 515 72 2312 81 13 13 chr10 68937646 68937954 -71378811 - AluSq SINE Alu -5 308 1 3364 131 20 52 chr10 68937954 68938024 -71378741 - MER41B LTR ERV1 -563 72 1 1882 139 4 0 chr10 68938172 68938446 -71378319 + AluSx SINE Alu 1 275 -37 1498 170 7 22 chr10 68938486 68938757 -71378008 + AluJb SINE Alu 33 299 -13 1326 155 8 19 chr10 68939075 68939333 -71377432 + L1MB3 LINE L1 5921 6175 -8 240 353 35 0 chr10 68939619 68939704 -71377061 + MIR3 SINE MIR 73 160 -48 1833 101 0 0 chr10 68939707 68939944 -71376821 + AluSg SINE Alu 36 272 -38 30 0 0 0 chr10 68940857 68940887 -71375878 + AT_rich Low_complexity Low_complexity 1 30 0 793 184 126 11 chr10 68940909 68941083 -71375682 - MIR SINE MIR -11 251 58 2187 117 0 0 chr10 68941354 68941645 -71375120 + AluSx SINE Alu 1 291 -21 2196 97 10 0 chr10 68941954 68942244 -71374521 + AluSq SINE Alu 1 293 -20 185 65 32 0 chr10 68942734 68942765 -71374000 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1518 108 0 23 chr10 68942828 68943042 -71373723 + AluSg/x SINE Alu 86 294 -18 315 281 166 29 chr10 68943315 68943454 -71373311 + MIR SINE MIR 7 164 -98 201 216 165 62 chr10 68943532 68943629 -71373136 + MIR SINE MIR 120 226 -36 228 234 0 0 chr10 68944364 68944411 -71372354 + L2 LINE L2 3267 3313 0 194 312 94 65 chr10 68944448 68944586 -71372179 - L2 LINE L2 -13 3300 3159 295 287 80 16 chr10 68944855 68945106 -71371659 - L1M4 LINE L1 -3733 2413 2147 1921 133 17 23 chr10 68945513 68945815 -71370950 - AluJb SINE Alu -9 303 4 703 284 25 2 chr10 68945881 68946143 -71370622 - HAL1b LINE L1 -807 541 319 2214 115 0 0 chr10 68947058 68947344 -71369421 + AluSq SINE Alu 1 286 -27 465 314 120 16 chr10 68947364 68947555 -71369210 + MIR SINE MIR 46 256 -6 2313 109 3 0 chr10 68948169 68948473 -71368292 - AluSx SINE Alu -7 305 1 813 175 145 48 chr10 68948547 68948775 -71367990 + MIR SINE MIR 13 262 0 23 33 0 0 chr10 68950586 68950616 -71366149 + AT_rich Low_complexity Low_complexity 1 30 0 2074 116 6 31 chr10 68950722 68951041 -71365724 - AluSx SINE Alu -1 311 1 389 229 124 19 chr10 68951770 68951875 -71364890 + L2 LINE L2 3198 3313 0 2074 131 3 6 chr10 68952099 68952411 -71364354 - AluSx SINE Alu -1 311 1 314 123 18 0 chr10 68953628 68953685 -71363080 + CT-rich Low_complexity Low_complexity 2 59 0 1923 165 0 3 chr10 68956804 68957101 -71359664 + AluJo SINE Alu 1 296 -16 1634 150 19 12 chr10 68957129 68957449 -71359316 - L1MA9 LINE L1 0 6312 5991 2224 101 10 23 chr10 68957727 68958035 -71358730 - AluSq SINE Alu -5 308 5 2259 117 0 0 chr10 68958371 68958671 -71358094 + AluSx SINE Alu 5 304 -8 1780 266 148 18 chr10 68958702 68959568 -71357197 + L2 LINE L2 2343 3313 0 33 97 0 0 chr10 68959599 68959702 -71357063 + AT_rich Low_complexity Low_complexity 1 103 0 449 269 36 9 chr10 68959751 68959900 -71356865 - MIR SINE MIR -63 145 21 1646 127 0 0 chr10 68959928 68960156 -71356609 + AluSq SINE Alu 85 312 -1 2310 103 0 13 chr10 68960328 68960630 -71356135 + AluSq SINE Alu 1 298 -15 207 289 164 90 chr10 68960684 68960996 -71355769 - L2 LINE L2 -12 3260 2926 199 219 50 33 chr10 68961089 68961154 -71355611 + MIR SINE MIR 89 147 -61 31 0 0 0 chr10 68961168 68961199 -71355566 + AT_rich Low_complexity Low_complexity 1 31 0 666 249 144 26 chr10 68961201 68961430 -71355335 - MIR SINE MIR 0 262 7 445 341 92 14 chr10 68961646 68961863 -71354902 - MIR SINE MIR -7 255 22 1717 187 7 7 chr10 68961940 68962240 -71354525 + AluJo SINE Alu 1 300 -12 459 0 0 0 chr10 68962268 68962319 -71354446 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 254 237 151 0 chr10 68962662 68962755 -71354010 - L1ME LINE L1 -342 5779 5673 2108 111 0 4 chr10 68962776 68963098 -71353667 - AluSq SINE Alu 0 325 5 251 184 79 13 chr10 68963472 68963548 -71353217 + MER117 DNA MER1_type 1 81 -116 1838 162 3 0 chr10 68964391 68964681 -71352084 + AluJb SINE Alu 5 295 -17 1291 187 3 41 chr10 68965863 68966010 -71350755 - Charlie5 DNA MER1_type 0 2624 2491 2257 84 0 0 chr10 68966010 68966326 -71350439 + AluSp SINE Alu 1 316 0 1291 187 3 41 chr10 68966326 68966471 -71350294 - Charlie5 DNA MER1_type -133 2491 2342 1988 117 0 17 chr10 68966483 68966774 -71349991 + AluSx SINE Alu 1 286 -26 2161 69 0 35 chr10 68966785 68967074 -71349691 + AluY SINE Alu 1 279 -32 375 23 0 0 chr10 68967074 68967118 -71349647 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 613 154 0 0 chr10 68967119 68967210 -71349555 - Charlie5 DNA MER1_type -2521 91 1 559 203 126 0 chr10 68967447 68967590 -71349175 + MER69A DNA AcHobo 7 167 -10 333 260 87 10 chr10 68968010 68968114 -71348651 + L2 LINE L2 3155 3266 -6 236 330 80 27 chr10 68968905 68969017 -71347748 - L2 LINE L2 -18 3295 3178 237 347 97 23 chr10 68969450 68969626 -71347139 - L2 LINE L2 -337 2977 2789 25 0 0 0 chr10 68969657 68969682 -71347083 + AT_rich Low_complexity Low_complexity 1 25 0 1878 112 7 66 chr10 68970391 68970695 -71346070 - AluSx SINE Alu -26 286 1 2475 77 0 26 chr10 68970710 68971023 -71345742 - AluSg SINE Alu -5 305 1 814 300 102 54 chr10 68971894 68972374 -71344391 - L2 LINE L2 0 3313 2811 638 181 24 0 chr10 68972456 68972599 -71344166 + MER5A DNA MER1_type 1 146 -43 240 256 67 11 chr10 68972602 68972692 -71344073 + L1MC5 LINE L1 7833 7927 -34 725 283 148 29 chr10 68972715 68973128 -71343637 - L1ME3A LINE L1 -223 5947 5486 1126 167 14 37 chr10 68973128 68973343 -71343422 - MER46A DNA MER2_type -25 211 2 1263 229 97 137 chr10 68973347 68973568 -71343197 - L1ME3A LINE L1 -679 5485 5257 2415 75 0 26 chr10 68973568 68973874 -71342891 + AluSq SINE Alu 1 298 -15 1263 229 97 137 chr10 68973874 68974497 -71342268 - L1ME3A LINE L1 -907 5257 4610 2320 109 0 0 chr10 68974497 68974809 -71341956 + AluSx SINE Alu 1 312 0 1263 229 97 137 chr10 68974809 68974937 -71341828 - L1ME3A LINE L1 -1554 4610 4478 757 227 0 0 chr10 68974937 68975069 -71341696 - FRAM SINE Alu -45 131 1 1263 229 97 137 chr10 68975069 68975838 -71340927 - L1ME3A LINE L1 -1686 4478 3688 585 341 70 11 chr10 68976022 68976306 -71340459 - L2 LINE L2 -1192 2122 1822 2130 135 3 0 chr10 68976412 68976715 -71340050 - AluSx SINE Alu -8 304 1 809 220 44 0 chr10 68976770 68976929 -71339836 - MER69A DNA AcHobo -7 170 5 394 196 64 146 chr10 68977547 68977766 -71338999 - L2 LINE L2 -1 3312 3112 2269 107 0 0 chr10 68977905 68978195 -71338570 + AluSc SINE Alu 1 290 -19 29 0 0 0 chr10 68978195 68978224 -71338541 + AT_rich Low_complexity Low_complexity 1 29 0 2156 114 3 3 chr10 68978327 68978643 -71338122 - AluSx SINE Alu 0 316 1 460 252 57 96 chr10 68979098 68979380 -71337385 - L2 LINE L2 -3 3310 3040 231 129 48 32 chr10 68980272 68980334 -71336431 - HAL1 LINE L1 -122 2385 2323 5909 165 65 51 chr10 68980334 68981485 -71335280 - Charlie1a DNA MER1_type -1306 1455 280 2120 127 13 0 chr10 68981485 68981792 -71334973 - AluSx SINE Alu -1 311 1 5909 165 65 51 chr10 68981792 68982016 -71334749 - Charlie1a DNA MER1_type -2481 280 61 709 299 80 46 chr10 68982043 68982541 -71334224 - HAL1 LINE L1 -177 2330 1816 795 261 56 62 chr10 68982595 68982951 -71333814 - HAL1 LINE L1 -2149 358 5 1254 281 71 13 chr10 68983186 68983638 -71333127 - L2 LINE L2 -7 3306 2829 315 383 37 21 chr10 68983959 68984147 -71332618 - L2 LINE L2 -228 3044 2854 1635 165 18 4 chr10 68984187 68984459 -71332306 + AluJb SINE Alu 7 282 -30 2312 101 0 0 chr10 68984479 68984776 -71331989 + AluSc SINE Alu 1 297 -12 244 231 13 51 chr10 68985117 68985195 -71331570 - MLT1C LTR MaLR -390 77 3 1159 258 87 4 chr10 68985201 68985656 -71331109 - L1MC4a LINE L1 -1878 5930 5403 1115 249 94 65 chr10 68986549 68987123 -71329642 - L2 LINE L2 0 3313 2707 2189 116 0 0 chr10 68987123 68987443 -71329322 - AluSx SINE Alu 0 312 3 1115 249 94 65 chr10 68987443 68987528 -71329237 - L2 LINE L2 -606 2707 2626 195 344 16 0 chr10 68987809 68987870 -71328895 + L2 LINE L2 3252 3313 0 324 270 54 27 chr10 68988282 68988393 -71328372 + MIR SINE MIR 40 153 -55 2479 67 3 0 chr10 68988414 68988713 -71328052 - AluSp SINE Alu -12 301 2 252 86 0 0 chr10 68989033 68989068 -71327697 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 207 362 109 23 chr10 68989580 68989754 -71327011 + L2 LINE L2 2848 3036 -236 595 303 52 3 chr10 68990111 68990314 -71326451 - MLT1J LTR MaLR -243 215 31 583 143 18 77 chr10 68990468 68990536 -71326229 - MIR SINE MIR -38 224 167 2076 147 0 7 chr10 68990536 68990843 -71325922 - AluSx SINE Alu -3 309 5 583 143 18 77 chr10 68990843 68990917 -71325848 - MIR SINE MIR -95 167 90 21 36 0 0 chr10 68991710 68991738 -71325027 + AT_rich Low_complexity Low_complexity 1 28 0 1634 174 22 7 chr10 68992335 68992610 -71324155 + AluJo SINE Alu 2 280 -32 835 144 8 0 chr10 68992864 68992989 -71323776 - FLAM_C SINE Alu -17 126 1 443 272 22 22 chr10 68994007 68994143 -71322622 - MIR3 SINE MIR -40 168 33 845 186 181 16 chr10 68994339 68994527 -71322238 + MER20 DNA MER1_type 1 219 0 3095 103 61 8 chr10 68995233 68995785 -71320980 - MER4B LTR ERV1 -7 772 27 1988 126 11 7 chr10 68996013 68996325 -71320440 - AluSq SINE Alu 0 313 1 2053 121 4 0 chr10 68996329 68996675 -71320090 - AluSx SINE Alu 0 347 1 2041 127 0 3 chr10 68998288 68998612 -71318153 + AluSx SINE Alu 1 323 0 23 0 0 0 chr10 69000874 69000897 -71315868 + AT_rich Low_complexity Low_complexity 1 23 0 2001 139 0 25 chr10 69000942 69001259 -71315506 + AluJb SINE Alu 1 309 -3 882 148 0 186 chr10 69001470 69001707 -71315058 + 7SK RNA RNA 1 193 0 1010 98 0 0 chr10 69002549 69002681 -71314084 - AluSg/x SINE Alu -17 295 164 589 271 37 68 chr10 69002691 69002802 -71313963 - L1ME LINE L1 -459 5662 5549 561 269 8 8 chr10 69002802 69002936 -71313829 + MER94 DNA DNA 1 134 0 589 271 37 68 chr10 69002936 69003145 -71313620 - L1ME LINE L1 -572 5549 5352 414 209 86 36 chr10 69003340 69003479 -71313286 + L1ME4a LINE L1 5962 6107 -14 809 138 29 0 chr10 69003485 69003623 -71313142 - L1MA8 LINE L1 -3 6288 6147 2011 116 3 70 chr10 69003770 69004099 -71312666 + AluSx SINE Alu 2 308 -4 2184 115 0 3 chr10 69004277 69004572 -71312193 + AluSx SINE Alu 1 294 -18 2157 107 0 60 chr10 69004857 69005175 -71311590 + AluSq SINE Alu 1 299 -14 2217 113 3 16 chr10 69005524 69005833 -71310932 + AluSx SINE Alu 1 305 -7 760 168 0 8 chr10 69006317 69006436 -71310329 + FLAM_C SINE Alu 1 118 -15 2640 113 49 78 chr10 69006458 69006666 -71310099 - LTR26E LTR ERV1 -148 474 262 1642 171 39 4 chr10 69006666 69006946 -71309819 + AluJo SINE Alu 1 290 -22 2640 113 49 78 chr10 69006946 69006988 -71309777 - LTR26E LTR ERV1 -360 262 220 2358 63 0 11 chr10 69006988 69007300 -71309465 + AluY SINE Alu 1 309 0 2640 113 49 78 chr10 69007300 69007535 -71309230 - LTR26E LTR ERV1 -402 220 1 539 298 78 29 chr10 69007535 69007740 -71309025 - MLT1L LTR MaLR -381 234 20 1952 159 77 37 chr10 69007744 69008122 -71308643 - MSTD LTR MaLR -3 393 1 2265 95 3 0 chr10 69008814 69009109 -71307656 + AluSx SINE Alu 1 296 -16 31 26 0 0 chr10 69009737 69009775 -71306990 + AT_rich Low_complexity Low_complexity 1 38 0 1752 142 10 36 chr10 69010390 69010692 -71306073 + AluJo SINE Alu 1 294 -18 1660 227 25 11 chr10 69012050 69012403 -71304362 - MER4D LTR ERV1 0 903 546 291 212 0 0 chr10 69012404 69012472 -71304293 - MER4E LTR ERV1 -592 280 105 1277 122 6 0 chr10 69012484 69012664 -71304101 + AluSg/x SINE Alu 129 309 -1 327 162 18 144 chr10 69012665 69012707 -71304058 - MER4E LTR ERV1 -669 97 51 2330 75 0 47 chr10 69012707 69013025 -71303740 + AluY SINE Alu 1 303 -8 327 162 18 144 chr10 69013025 69013093 -71303672 - MER4E LTR ERV1 -715 51 1 1189 217 83 102 chr10 69013099 69013384 -71303381 - MLT1J LTR MaLR -4 507 235 2092 129 0 0 chr10 69013384 69013671 -71303094 - AluSg SINE Alu -13 297 11 1189 217 83 102 chr10 69013671 69013902 -71302863 - MLT1J LTR MaLR -276 235 1 202 234 0 0 chr10 69014017 69014064 -71302701 + (TA)n Simple_repeat Simple_repeat 2 48 0 362 226 346 8 chr10 69014353 69014486 -71302279 + MER5B DNA MER1_type 1 178 0 2340 113 7 0 chr10 69014510 69014820 -71301945 + AluSx SINE Alu 1 312 0 189 239 43 0 chr10 69014980 69015026 -71301739 + MER5B DNA MER1_type 1 48 -130 * 955 190 0 0 chr10 69015025 69015199 -71301566 + MER5A DNA MER1_type 16 189 0 240 287 89 79 chr10 69015228 69015329 -71301436 + MER5B DNA MER1_type 61 162 -16 499 227 288 0 chr10 69015385 69015548 -71301217 + MER63A DNA MER1_type 1 210 0 2433 126 57 3 chr10 69015761 69016127 -71300638 + MER4D LTR ERV1 190 575 -328 281 167 0 33 chr10 69016142 69016200 -71300565 + MER4E LTR ERV1 531 586 -193 941 90 8 0 chr10 69016200 69016333 -71300432 - MER41B LTR ERV1 0 635 502 1058 233 69 31 chr10 69016340 69016657 -71300108 + LTR2B LTR ERV1 148 476 -14 426 200 27 40 chr10 69016671 69016816 -71299949 + MER4D LTR ERV1 626 870 -8 1007 216 36 44 chr10 69017025 69017275 -71299490 + PABL_B LTR ERV1 419 666 -1 292 109 0 0 chr10 69018274 69018320 -71298445 + AluSp/q SINE Alu 255 300 -3 3587 49 2 0 chr10 69019725 69020156 -71296609 + Harlequin LTR ERV1 6464 6895 -1 1953 191 61 29 chr10 69020179 69020624 -71296141 + LTR2B LTR ERV1 32 490 0 306 241 126 0 chr10 69020651 69020738 -71296027 + LTR10A LTR ERV1 1 98 -511 635 183 10 0 chr10 69022538 69022642 -71294123 - FLAM_A SINE Alu -19 123 19 1429 124 5 0 chr10 69022646 69022855 -71293910 - AluSg/x SINE Alu -1 311 102 202 207 35 35 chr10 69022856 69022914 -71293851 - MIR SINE MIR -116 146 89 649 226 0 8 chr10 69022916 69023049 -71293716 + AluSg/x SINE Alu 155 286 -24 21 0 0 0 chr10 69023454 69023475 -71293290 + AT_rich Low_complexity Low_complexity 1 21 0 352 278 68 68 chr10 69024486 69024677 -71292088 + LTR16A LTR ERVL 105 295 -155 275 245 75 11 chr10 69025997 69026091 -71290674 + MIR SINE MIR 47 146 -62 222 405 30 0 chr10 69026114 69026245 -71290520 + MER5A DNA MER1_type 18 152 -37 2267 96 10 0 chr10 69027370 69027662 -71289103 + AluSp SINE Alu 1 295 -18 210 268 75 23 chr10 69027826 69027929 -71288836 - MIR SINE MIR -67 141 34 1624 104 5 5 chr10 69028817 69029037 -71287728 + AluSx SINE Alu 1 220 -92 583 143 18 77 chr10 69029964 69030038 -71286727 + MIR SINE MIR 90 154 -108 1988 147 3 10 chr10 69030038 69030344 -71286421 + AluSx SINE Alu 5 308 -4 583 143 18 77 chr10 69030344 69030412 -71286353 + MIR SINE MIR 154 224 -38 595 303 52 3 chr10 69030566 69030769 -71285996 + MLT1J LTR MaLR 31 203 -243 207 362 109 23 chr10 69031126 69031300 -71285465 - L2 LINE L2 -236 3036 2848 252 86 0 0 chr10 69031812 69031847 -71284918 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2395 80 3 26 chr10 69032167 69032480 -71284285 + AluSx SINE Alu 2 307 -5 1878 112 7 66 chr10 69032495 69032799 -71283966 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr10 69033508 69033533 -71283232 + AT_rich Low_complexity Low_complexity 1 25 0 237 347 97 23 chr10 69033564 69033740 -71283025 + L2 LINE L2 2789 2977 -337 236 330 80 27 chr10 69034173 69034285 -71282480 + L2 LINE L2 3178 3295 -18 919 248 30 77 chr10 69034833 69035262 -71281503 + L1ME3A LINE L1 4867 5255 -907 2415 75 0 26 chr10 69035262 69035568 -71281197 - AluSq SINE Alu -15 298 1 919 248 30 77 chr10 69035568 69035789 -71280976 + L1ME3A LINE L1 5255 5485 -677 1126 167 14 37 chr10 69035793 69036008 -71280757 + MER46A DNA MER2_type 2 211 -25 725 283 148 29 chr10 69036008 69036421 -71280344 + L1ME3A LINE L1 5486 5947 -223 240 256 67 11 chr10 69036444 69036534 -71280231 - L1MC5 LINE L1 -34 7927 7833 638 181 24 0 chr10 69036537 69036680 -71280085 - MER5A DNA MER1_type -43 146 1 747 300 104 56 chr10 69036762 69037242 -71279523 + L2 LINE L2 2811 3313 0 2183 100 10 0 chr10 69038114 69038404 -71278361 + AluSq SINE Alu 1 293 -20 185 65 32 0 chr10 69038894 69038925 -71277840 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1513 108 0 23 chr10 69038988 69039202 -71277563 + AluSg/x SINE Alu 86 294 -18 312 281 166 29 chr10 69039475 69039614 -71277151 + MIR SINE MIR 7 164 -98 195 216 165 62 chr10 69039692 69039789 -71276976 + MIR SINE MIR 120 226 -36 225 234 0 0 chr10 69040524 69040571 -71276194 + L2 LINE L2 3267 3313 0 390 276 77 19 chr10 69041015 69041276 -71275489 - L1M4 LINE L1 -3733 2413 2138 1906 133 17 23 chr10 69041673 69041975 -71274790 - AluJb SINE Alu -9 303 4 799 270 33 9 chr10 69042041 69042303 -71274462 - HAL1b LINE L1 -807 541 319 2209 115 0 0 chr10 69043218 69043504 -71273261 + AluSq SINE Alu 1 286 -27 455 314 120 16 chr10 69043524 69043715 -71273050 + MIR SINE MIR 46 256 -6 2311 109 3 0 chr10 69044329 69044633 -71272132 - AluSx SINE Alu -7 305 1 806 175 145 48 chr10 69044707 69044935 -71271830 + MIR SINE MIR 13 262 0 23 33 0 0 chr10 69046746 69046776 -71269989 + AT_rich Low_complexity Low_complexity 1 30 0 1975 125 6 34 chr10 69046882 69047202 -71269563 - AluSx SINE Alu -1 311 1 380 229 124 19 chr10 69047931 69048036 -71268729 + L2 LINE L2 3198 3313 0 2066 131 3 6 chr10 69048260 69048572 -71268193 - AluSx SINE Alu -1 311 1 257 225 155 0 chr10 69099322 69099393 -71217372 + L2 LINE L2 3227 3308 -5 1117 164 0 20 chr10 69099586 69099787 -71216978 - AluJb SINE Alu -16 296 100 418 255 41 0 chr10 69099924 69100022 -71216743 + L2 LINE L2 3198 3299 -14 1682 150 0 25 chr10 69100133 69100407 -71216358 - AluJb SINE Alu -45 267 1 2245 103 7 0 chr10 69101220 69101511 -71215254 - AluSx SINE Alu -19 293 1 546 155 57 7 chr10 69102130 69102431 -71214334 + (TA)n Simple_repeat Simple_repeat 1 316 0 2126 119 0 3 chr10 69102435 69102729 -71214036 - AluSx SINE Alu -19 293 1 1848 145 6 35 chr10 69103100 69103411 -71213354 + AluJb SINE Alu 1 302 -10 1778 170 13 10 chr10 69103663 69103963 -71212802 + AluJo SINE Alu 1 301 -11 1309 111 0 0 chr10 69104359 69104530 -71212235 - AluSp SINE Alu -22 291 121 810 101 37 0 chr10 69104949 69105058 -71211707 + AluJb SINE Alu 2 114 -198 485 241 0 14 chr10 69105059 69105204 -71211561 + GA-rich Low_complexity Low_complexity 2 144 0 475 163 0 0 chr10 69105857 69105937 -71210828 + MER116 DNA Mariner 1 80 0 616 278 148 30 chr10 69106579 69106842 -71209923 - L2 LINE L2 0 3313 3020 372 240 52 0 chr10 69106915 69107011 -71209754 + MER5C DNA MER1_type 2 102 -222 317 99 0 25 chr10 69107011 69107243 -71209522 + AluSq SINE Alu 1 298 -5 290 221 366 0 chr10 69107244 69107416 -71209349 + MER5C DNA MER1_type 90 324 0 1057 257 247 20 chr10 69107439 69108021 -71208744 - L2 LINE L2 -887 2427 1706 2048 161 0 0 chr10 69108021 69108331 -71208434 - AluSx SINE Alu -2 310 1 1057 257 247 20 chr10 69108331 69108343 -71208422 - L2 LINE L2 -1608 1706 1698 12573 141 19 34 chr10 69109148 69110125 -71206640 - L1MA4 LINE L1 0 6300 5310 2135 101 3 17 chr10 69110125 69110412 -71206353 - AluSx SINE Alu -29 283 1 12573 141 19 34 chr10 69110412 69111127 -71205638 - L1MA4 LINE L1 -990 5310 4586 2099 151 0 0 chr10 69111127 69111439 -71205326 - AluSx SINE Alu 0 312 1 12573 141 19 34 chr10 69111439 69112379 -71204386 - L1MA4 LINE L1 -1714 4586 3695 213 39 0 0 chr10 69112379 69112405 -71204360 + (TTG)n Simple_repeat Simple_repeat 1 26 0 12573 141 19 34 chr10 69112405 69113101 -71203664 - L1MA4 LINE L1 -2605 3695 2990 378 0 0 0 chr10 69113719 69113761 -71203004 + (CA)n Simple_repeat Simple_repeat 1 42 0 30 27 0 0 chr10 69114062 69114099 -71202666 + AT_rich Low_complexity Low_complexity 1 37 0 541 266 162 0 chr10 69115546 69115700 -71201065 + MER5A DNA MER1_type 10 188 -1 1895 147 3 19 chr10 69115712 69116026 -71200739 - AluJo SINE Alu -3 309 1 2080 148 0 7 chr10 69116396 69116706 -71200059 - AluJb SINE Alu -4 308 1 249 33 0 0 chr10 69116719 69116749 -71200016 + (TCC)n Simple_repeat Simple_repeat 3 32 0 565 188 0 0 chr10 69117680 69117776 -71198989 - Tigger7 DNA MER2_type 0 2491 2396 1223 194 14 9 chr10 69117781 69118003 -71198762 - Tigger7 DNA MER2_type -290 260 38 393 268 106 0 chr10 69118519 69118642 -71198123 - MER5B DNA MER1_type -42 136 1 1802 63 21 13 chr10 69118660 69118898 -71197867 + L1PA8A LINE L1 5865 6104 -27 281 234 19 123 chr10 69119799 69119953 -71196812 + L2 LINE L2 2897 3034 -238 296 256 36 73 chr10 69120078 69120215 -71196550 + L2 LINE L2 3137 3268 -4 2406 94 0 0 chr10 69120401 69120700 -71196065 + AluSx SINE Alu 5 303 -9 2164 112 0 43 chr10 69121408 69121731 -71195034 + AluSx SINE Alu 3 311 -1 301 253 0 0 chr10 69121993 69122072 -71194693 - L1ME1 LINE L1 -273 5893 5815 2460 80 0 3 chr10 69122072 69122373 -71194392 + AluY SINE Alu 1 300 -11 1891 142 20 14 chr10 69123228 69123523 -71193242 + AluJo SINE Alu 1 297 -15 285 98 0 0 chr10 69123602 69123643 -71193122 + (CA)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr10 69123642 69123669 -71193096 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 264 161 36 36 chr10 69123671 69123727 -71193038 - Tigger5 DNA MER2_type 0 2323 2268 * 378 161 0 0 chr10 69123681 69123737 -71193028 + Tigger5 DNA MER2_type 2268 2323 0 2278 97 13 26 chr10 69124361 69124672 -71192093 + AluSx SINE Alu 1 307 -5 242 326 64 21 chr10 69124840 69124981 -71191784 + L2 LINE L2 2904 3050 -222 224 174 22 0 chr10 69125231 69125277 -71191488 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1951 145 0 26 chr10 69125318 69125621 -71191144 + AluSx SINE Alu 1 295 -17 455 218 36 9 chr10 69126051 69126161 -71190604 - MER5B DNA MER1_type -3 175 63 2157 120 0 0 chr10 69126897 69127201 -71189564 + AluSx SINE Alu 1 304 0 2065 134 6 13 chr10 69129600 69129914 -71186851 - AluSx SINE Alu 0 312 1 440 210 0 0 chr10 69131545 69131626 -71185139 + L2 LINE L2 3233 3313 0 351 250 53 61 chr10 69131921 69132053 -71184712 - L2 LINE L2 0 3272 3142 2240 110 10 0 chr10 69132367 69132676 -71184089 - AluSx SINE Alu 0 312 1 1203 188 53 0 chr10 69132918 69133126 -71183639 - MER20 DNA MER1_type 0 219 1 721 139 0 0 chr10 69133186 69133287 -71183478 + FLAM_C SINE Alu 23 123 -20 2256 130 0 0 chr10 69133639 69133947 -71182818 - AluSx SINE Alu -4 308 1 2174 112 3 7 chr10 69134464 69134768 -71181997 - AluSx SINE Alu -9 303 1 928 191 0 6 chr10 69135000 69135173 -71181592 + MER5B DNA MER1_type 1 172 -6 15655 111 38 13 chr10 69136000 69136779 -71179986 + Tigger1 DNA MER2_type 1 759 -1659 2516 64 0 0 chr10 69136779 69137075 -71179690 + AluY SINE Alu 1 296 -15 15655 111 38 13 chr10 69137075 69138478 -71178287 + Tigger1 DNA MER2_type 759 2250 -168 1636 166 0 10 chr10 69138478 69138792 -71177973 - AluJb SINE Alu 0 312 5 15655 111 38 13 chr10 69138792 69138966 -71177799 + Tigger1 DNA MER2_type 2250 2418 0 416 93 0 0 chr10 69140387 69140441 -71176324 - U2 snRNA snRNA -134 54 1 954 128 0 0 chr10 69140460 69140601 -71176164 - AluSg/x SINE Alu 0 312 172 2171 113 0 10 chr10 69140625 69140925 -71175840 - AluSx SINE Alu -15 297 1 29 60 0 0 chr10 69141895 69141945 -71174820 + AT_rich Low_complexity Low_complexity 1 50 0 2338 78 3 3 chr10 69141988 69142282 -71174483 + AluSc SINE Alu 1 294 -15 204 67 0 0 chr10 69142810 69142840 -71173925 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 35 0 0 chr10 69143467 69143496 -71173269 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr10 69143523 69143543 -71173222 + (T)n Simple_repeat Simple_repeat 1 20 0 367 235 107 48 chr10 69143579 69143766 -71172999 + MER88 LTR ERVL 46 243 -221 * 1473 233 121 21 chr10 69143624 69144011 -71172754 - MER74B LTR ERVL -74 548 123 1627 185 44 3 chr10 69144024 69144321 -71172444 - AluJo SINE Alu -3 309 1 6465 128 56 53 chr10 69144423 69144533 -71172232 + Tigger3b DNA MER2_type 1 109 -2919 2091 107 58 30 chr10 69144533 69144898 -71171867 + THE1C LTR MaLR 1 375 0 6465 128 56 53 chr10 69144898 69145336 -71171429 + Tigger3b DNA MER2_type 109 544 -2484 2239 123 0 0 chr10 69145336 69145637 -71171128 - AluSx SINE Alu -11 301 1 6465 128 56 53 chr10 69145637 69146314 -71170451 + Tigger3b DNA MER2_type 544 1231 0 2443 85 0 0 chr10 69146507 69146814 -71169951 + AluY SINE Alu 1 307 -4 2507 46 0 0 chr10 69147130 69147446 -71169319 + AluY SINE Alu 1 316 0 1927 163 0 7 chr10 69147500 69147807 -71168958 - AluJo SINE Alu -5 307 3 22 0 0 0 chr10 69148180 69148202 -71168563 + AT_rich Low_complexity Low_complexity 1 22 0 2405 100 3 0 chr10 69149309 69149610 -71167155 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 69150539 69150577 -71166188 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr10 69152638 69152673 -71164092 + AT_rich Low_complexity Low_complexity 1 35 0 572 224 86 7 chr10 69153986 69154138 -71162627 - MER103 DNA DNA -1 165 2 1675 163 57 18 chr10 69154175 69154458 -71162307 + AluJb SINE Alu 1 294 -18 2240 114 7 0 chr10 69154508 69154816 -71161949 - AluSq SINE Alu -3 310 1 220 324 27 36 chr10 69154821 69154932 -71161833 - MIR SINE MIR -64 144 35 190 184 20 20 chr10 69154953 69155002 -71161763 - MIR3 SINE MIR -39 169 121 1364 159 12 12 chr10 69155340 69155585 -71161180 + AluJo SINE Alu 60 304 -8 264 30 0 0 chr10 69155931 69155964 -71160801 + (CA)n Simple_repeat Simple_repeat 2 34 0 2058 129 4 0 chr10 69156199 69156504 -71160261 - AluSx SINE Alu 0 306 1 342 222 168 54 chr10 69156920 69157087 -71159678 + MIR SINE MIR 7 192 -70 537 227 60 20 chr10 69157281 69157431 -71159334 + MIR SINE MIR 79 234 -28 2234 107 0 7 chr10 69157648 69157946 -71158819 + AluSx SINE Alu 1 296 -16 1879 263 72 25 chr10 69158247 69158685 -71158080 + MLT2E LTR ERVL 30 503 -125 2316 106 0 0 chr10 69158685 69158988 -71157777 - AluSx SINE Alu -9 303 1 1879 263 72 25 chr10 69158988 69159116 -71157649 + MLT2E LTR ERVL 503 623 -5 1787 146 3 21 chr10 69160201 69160512 -71156253 - AluJb SINE Alu 0 308 3 313 231 88 0 chr10 69160512 69160603 -71156162 - L2 LINE L2 -9 3304 3206 191 333 52 0 chr10 69161019 69161115 -71155650 + L2 LINE L2 3155 3255 -17 250 211 105 98 chr10 69162323 69162350 -71154415 + MER103 DNA DNA 24 49 -117 1887 165 23 46 chr10 69162350 69162629 -71154136 + MER2 DNA MER2_type 1 272 -72 2212 105 0 7 chr10 69162629 69162923 -71153842 - AluSx SINE Alu -20 292 1 1887 165 23 46 chr10 69162923 69162994 -71153771 + MER2 DNA MER2_type 272 343 -1 250 211 105 98 chr10 69162994 69163099 -71153666 + MER103 DNA DNA 49 157 -9 1982 135 10 19 chr10 69163171 69163651 -71153114 + AluSx SINE Alu 1 312 0 1097 236 61 58 chr10 69163956 69164023 -71152742 - MER39 LTR ERV1 0 707 642 1730 186 3 19 chr10 69164023 69164340 -71152425 + AluJo SINE Alu 1 312 0 1097 236 61 58 chr10 69164340 69164636 -71152129 - MER39 LTR ERV1 -65 642 146 1798 104 0 8 chr10 69164636 69164877 -71151888 - AluSx SINE Alu -23 289 51 1097 236 61 58 chr10 69164877 69164960 -71151805 - MER39 LTR ERV1 -561 146 65 1146 212 72 44 chr10 69165216 69165615 -71151150 + L1MC5 LINE L1 7246 7656 -300 2137 146 0 0 chr10 69165615 69165916 -71150849 + AluSx SINE Alu 1 301 -11 1622 182 3 11 chr10 69165947 69166233 -71150532 + AluJo SINE Alu 17 300 -12 701 221 48 72 chr10 69166233 69166482 -71150283 + L1MC5 LINE L1 7651 7893 -68 2231 92 4 0 chr10 69166502 69166834 -71149931 - AluSx SINE Alu 0 333 1 1527 94 103 0 chr10 69168178 69168391 -71148374 - AluSp SINE Alu -20 293 59 2219 136 0 0 chr10 69168392 69168700 -71148065 + AluSg SINE Alu 2 309 -1 2349 106 3 0 chr10 69168882 69169193 -71147572 - AluSx SINE Alu 0 312 1 263 172 0 62 chr10 69169194 69169258 -71147507 - LTR67 LTR ERVL -41 516 457 549 277 76 34 chr10 69170354 69170592 -71146173 - MIR SINE MIR -2 260 13 183 100 0 0 chr10 69171737 69171767 -71144998 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 0 0 0 chr10 69172608 69172636 -71144129 + AT_rich Low_complexity Low_complexity 1 28 0 2448 83 0 0 chr10 69174148 69174448 -71142317 - AluSx SINE Alu -12 300 1 1167 253 84 86 chr10 69174539 69175135 -71141630 + MLT1G1 LTR MaLR 1 595 0 417 281 29 7 chr10 69175164 69175303 -71141462 + MIR SINE MIR 20 161 -101 2224 129 0 0 chr10 69175303 69175614 -71141151 + AluSx SINE Alu 1 311 -1 30 45 0 0 chr10 69175899 69175943 -71140822 + AT_rich Low_complexity Low_complexity 1 44 0 2252 131 0 0 chr10 69176004 69176316 -71140449 + AluSx SINE Alu 1 312 0 235 289 69 25 chr10 69176342 69176546 -71140219 + L1MC4 LINE L1 5755 5967 -1841 2791 182 180 147 chr10 69176985 69177684 -71139081 + L1MC4 LINE L1 6460 7135 -907 812 226 6 17 chr10 69177684 69177861 -71138904 + FRAM SINE Alu 1 175 -1 2791 182 180 147 chr10 69177861 69178383 -71138382 + L1MC4 LINE L1 7135 7903 -139 265 120 40 0 chr10 69178542 69178592 -71138173 - L1MB4 LINE L1 -4 6176 6125 1802 169 31 31 chr10 69178636 69178654 -71138111 - L1MB4 LINE L1 -33 6147 6130 1834 121 12 33 chr10 69178654 69178775 -71137990 - L1MA5A LINE L1 -3 6294 6172 2059 134 10 0 chr10 69178775 69179065 -71137700 - AluSx SINE Alu -19 293 1 1834 121 12 33 chr10 69179065 69179273 -71137492 - L1MA5A LINE L1 -125 6172 5972 1802 169 31 31 chr10 69179273 69179648 -71137117 - L1MB4 LINE L1 -50 6130 5742 1611 118 9 0 chr10 69179648 69179877 -71136888 + AluSg/x SINE Alu 77 307 -5 25 0 0 0 chr10 69179942 69179967 -71136798 + AT_rich Low_complexity Low_complexity 1 25 0 1353 210 101 48 chr10 69181885 69182203 -71134562 + L1ME3 LINE L1 2258 2558 -3588 2479 67 0 13 chr10 69182203 69182502 -71134263 + AluY SINE Alu 1 295 -16 1353 210 101 48 chr10 69182502 69182598 -71134167 + L1ME3 LINE L1 2558 2647 -3499 2357 127 114 5 chr10 69182598 69182984 -71133781 + MSTA LTR MaLR 1 428 0 1353 210 101 48 chr10 69182984 69183115 -71133650 + L1ME3 LINE L1 2647 2833 -3313 744 276 46 13 chr10 69183094 69183467 -71133298 + L1ME3 LINE L1 3092 3476 -2670 * 478 292 164 19 chr10 69183571 69183960 -71132805 - LTR16A LTR ERVL -5 445 3 2526 253 84 73 chr10 69183961 69184371 -71132394 + L1ME3 LINE L1 3532 3936 -2226 1586 194 14 10 chr10 69184371 69184664 -71132101 + AluJo SINE Alu 5 298 -14 2526 253 84 73 chr10 69184664 69184849 -71131916 + L1ME3 LINE L1 3936 4117 -2045 330 26 0 0 chr10 69184849 69184888 -71131877 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2121 125 0 0 chr10 69184895 69185175 -71131590 - AluSc SINE Alu -28 281 2 2526 253 84 73 chr10 69185175 69185349 -71131416 + L1ME3 LINE L1 4122 4293 -1869 2116 138 3 0 chr10 69185349 69185639 -71131126 + AluSx SINE Alu 2 292 -20 2526 253 84 73 chr10 69185639 69185751 -71131014 + L1ME3 LINE L1 4293 4402 -1760 1348 155 144 18 chr10 69185751 69186028 -71130737 - AluJo SINE Alu 0 312 1 2526 253 84 73 chr10 69186028 69186571 -71130194 + L1ME3 LINE L1 4402 4937 -1225 2049 113 3 24 chr10 69186571 69186864 -71129901 + AluSx SINE Alu 1 287 -25 2526 253 84 73 chr10 69186864 69187774 -71128991 + L1ME3 LINE L1 4937 5907 -255 2004 151 0 20 chr10 69187774 69188078 -71128687 + AluJb SINE Alu 1 298 -14 2526 253 84 73 chr10 69188078 69188276 -71128489 + L1ME3 LINE L1 5907 6101 -61 1813 133 8 4 chr10 69188298 69188557 -71128208 + AluSq SINE Alu 34 294 -15 500 0 17 0 chr10 69188557 69188617 -71128148 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 602 274 39 44 chr10 69188655 69188859 -71127906 + HAL1 LINE L1 410 612 -1895 416 121 0 0 chr10 69188862 69188920 -71127845 - MLT1L LTR MaLR -369 246 189 26 0 0 0 chr10 69190130 69190156 -71126609 + AT_rich Low_complexity Low_complexity 1 26 0 815 196 0 65 chr10 69190305 69190428 -71126337 - MER5A DNA MER1_type -1 188 79 2333 101 7 3 chr10 69190428 69190734 -71126031 - AluSx SINE Alu -5 307 1 815 196 0 65 chr10 69190734 69190794 -71125971 - MER5A DNA MER1_type -110 79 17 2350 87 3 0 chr10 69191879 69192168 -71124597 + AluSx SINE Alu 4 293 -19 1196 144 0 6 chr10 69192178 69192359 -71124406 + AluSc SINE Alu 130 309 0 1649 181 66 23 chr10 69192448 69192751 -71124014 - MLT1E LTR MaLR -2 591 276 3828 96 58 25 chr10 69192774 69193017 -71123748 + MER4B LTR ERV1 1 235 -375 1237 72 24 0 chr10 69193017 69193184 -71123581 + L1PA8 LINE L1 6002 6172 0 3828 96 58 25 chr10 69193184 69193531 -71123234 + MER4B LTR ERV1 235 610 0 575 171 135 98 chr10 69193536 69193729 -71123036 - MLT1E LTR MaLR -350 243 44 678 203 77 65 chr10 69193758 69194019 -71122746 + L1MC5 LINE L1 7669 7932 -29 2296 116 3 3 chr10 69194052 69194363 -71122402 + AluSp SINE Alu 1 311 -2 1687 221 114 47 chr10 69194372 69194880 -71121885 - MLT1F LTR MaLR 0 542 1 2179 137 0 0 chr10 69194935 69195241 -71121524 + AluSx SINE Alu 1 306 -6 1896 173 0 0 chr10 69195408 69195692 -71121073 + AluJo SINE Alu 1 284 -28 613 289 84 39 chr10 69196265 69196576 -71120189 + MLT1I LTR MaLR 71 395 -14 2295 108 42 31 chr10 69196656 69197016 -71119749 + THE1B LTR MaLR 1 364 0 11865 100 3 2 chr10 69197016 69198595 -71118170 + THE1B-int LTR MaLR 1 1580 0 1922 127 43 43 chr10 69198597 69198921 -71117844 + THE1B LTR MaLR 3 326 -38 228 172 0 35 chr10 69198955 69199013 -71117752 + (CGG)n Simple_repeat Simple_repeat 2 57 0 5826 64 15 54 chr10 69199239 69200221 -71116544 + SVA Other Other 344 1404 0 422 61 0 0 chr10 69200223 69200272 -71116493 + THE1B LTR MaLR 307 355 0 1894 154 0 41 chr10 69200506 69200824 -71115941 + AluJo SINE Alu 1 305 -7 2179 119 10 0 chr10 69201018 69201313 -71115452 - AluSx SINE Alu -14 298 1 2574 48 0 0 chr10 69201639 69201932 -71114833 + AluY SINE Alu 1 293 -18 2024 130 35 0 chr10 69202058 69202343 -71114422 + AluSx SINE Alu 3 297 -15 909 114 0 15 chr10 69202972 69203104 -71113661 - FLAM_C SINE Alu -2 131 2 23 33 0 0 chr10 69203382 69203412 -71113353 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr10 69203665 69203687 -71113078 + (TG)n Simple_repeat Simple_repeat 1 22 0 2151 110 0 4 chr10 69203687 69203968 -71112797 - AluSx SINE Alu -32 280 1 2043 147 0 6 chr10 69205589 69205902 -71110863 - AluJb SINE Alu -1 311 1 2376 108 0 0 chr10 69206004 69206309 -71110456 - AluSx SINE Alu -7 305 1 891 141 0 7 chr10 69206425 69206560 -71110205 - AluJo SINE Alu -178 134 1 1781 116 0 4 chr10 69206795 69207036 -71109729 + AluSq SINE Alu 29 268 -45 545 212 9 26 chr10 69207066 69207179 -71109586 - MER81 DNA DNA 0 114 4 252 0 0 0 chr10 69207222 69207250 -71109515 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1938 148 11 0 chr10 69207699 69207983 -71108782 + AluSx SINE Alu 1 287 -25 640 256 130 4 chr10 69207999 69208229 -71108536 - MIR SINE MIR -1 261 3 1951 128 3 54 chr10 69209167 69209480 -71107285 + AluSx SINE Alu 1 297 -15 270 0 0 0 chr10 69209585 69209615 -71107150 + (CA)n Simple_repeat Simple_repeat 1 30 0 186 315 34 79 chr10 69209700 69209789 -71106976 + MIR SINE MIR 159 243 -19 2277 86 7 0 chr10 69210361 69210651 -71106114 + AluSp SINE Alu 5 296 -17 292 246 54 54 chr10 69212364 69212434 -71104331 + MIR SINE MIR 34 106 -156 2172 138 0 0 chr10 69212434 69212731 -71104034 - AluSx SINE Alu -15 297 1 292 246 54 54 chr10 69212731 69212790 -71103975 + MIR SINE MIR 105 163 -99 1620 171 53 0 chr10 69212800 69213081 -71103684 - AluJo SINE Alu -16 296 1 2095 106 0 0 chr10 69213650 69213923 -71102842 + AluSq SINE Alu 37 309 -4 216 184 41 0 chr10 69214105 69214154 -71102611 + L2 LINE L2 2926 2976 -338 290 217 29 14 chr10 69214255 69214324 -71102441 + MER96 DNA MER1_type? 1 70 -105 735 284 54 43 chr10 69214368 69214646 -71102119 + LTR16A LTR ERVL 59 339 -111 1476 118 0 0 chr10 69214646 69214849 -71101916 - AluSg/x SINE Alu -9 301 99 1933 167 0 0 chr10 69215132 69215432 -71101333 + AluJo SINE Alu 1 300 -12 2117 121 3 32 chr10 69215591 69215906 -71100859 + AluSx SINE Alu 1 306 -6 218 31 0 31 chr10 69215932 69215964 -71100801 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 883 164 40 0 chr10 69216644 69216796 -71099969 + AluSg/x SINE Alu 137 294 -18 391 273 122 86 chr10 69217294 69217598 -71099167 + L2 LINE L2 2958 3272 0 978 113 0 21 chr10 69217751 69217892 -71098873 + FLAM_C SINE Alu 6 143 0 1743 150 60 20 chr10 69217905 69218205 -71098560 + AluJo SINE Alu 1 312 0 737 132 0 0 chr10 69218276 69218390 -71098375 + FLAM_C SINE Alu 11 124 -19 356 239 11 0 chr10 69218405 69218497 -71098268 + L1MC4 LINE L1 7949 8041 -1 24 53 0 0 chr10 69218475 69218513 -71098252 + AT_rich Low_complexity Low_complexity 1 38 0 * 412 218 56 0 chr10 69218552 69218661 -71098104 + MIR SINE MIR 70 184 -63 333 0 0 0 chr10 69218679 69218716 -71098049 + (CA)n Simple_repeat Simple_repeat 2 38 0 2317 99 0 7 chr10 69218746 69219050 -71097715 + AluSg SINE Alu 1 302 -8 25 0 0 0 chr10 69219308 69219333 -71097432 + AT_rich Low_complexity Low_complexity 1 25 0 2134 103 11 0 chr10 69219495 69219796 -71096969 + AluSx SINE Alu 1 304 0 1804 163 3 7 chr10 69219818 69220113 -71096652 - AluSx SINE Alu -18 294 1 186 171 0 0 chr10 69220118 69220159 -71096606 + GA-rich Low_complexity Low_complexity 2 42 0 200 255 0 21 chr10 69220169 69220216 -71096549 + MIR SINE MIR 217 262 0 430 242 118 39 chr10 69220395 69220548 -71096217 + MER5A DNA MER1_type 24 188 -1 2329 98 7 0 chr10 69220812 69221117 -71095648 - AluSx SINE Alu -5 307 1 1907 135 29 29 chr10 69222489 69222801 -71093964 + AluJo SINE Alu 1 312 0 1948 108 0 41 chr10 69222977 69223305 -71093460 - AluSx SINE Alu 0 318 3 22 0 0 0 chr10 69223409 69223431 -71093334 + AT_rich Low_complexity Low_complexity 1 22 0 545 90 0 0 chr10 69223434 69223501 -71093264 + AluJ/FLAM SINE Alu 1 67 -245 30 0 0 0 chr10 69223505 69223535 -71093230 + AT_rich Low_complexity Low_complexity 1 30 0 322 302 83 0 chr10 69223881 69223977 -71092788 + L2 LINE L2 3128 3231 -41 233 56 0 28 chr10 69224486 69224522 -71092243 + (GAAA)n Simple_repeat Simple_repeat 4 38 0 803 172 0 0 chr10 69225001 69225117 -71091648 + FLAM_C SINE Alu 3 118 -15 22 35 0 0 chr10 69225117 69225146 -71091619 + AT_rich Low_complexity Low_complexity 1 29 0 841 181 0 0 chr10 69225201 69225334 -71091431 - FLAM_C SINE Alu 0 133 1 588 211 84 42 chr10 69225336 69225394 -71091371 - MER5B DNA MER1_type -5 173 119 2280 108 3 3 chr10 69225394 69225700 -71091065 + AluSq SINE Alu 1 306 -7 588 211 84 42 chr10 69225700 69225807 -71090958 - MER5B DNA MER1_type -59 119 1 40 73 0 0 chr10 69226010 69226092 -71090673 + AT_rich Low_complexity Low_complexity 1 82 0 2073 127 0 3 chr10 69226951 69227251 -71089514 - AluSx SINE Alu -13 299 1 2371 67 0 0 chr10 69227412 69227720 -71089045 - AluY SINE Alu 0 308 1 501 216 0 10 chr10 69227955 69228052 -71088713 + MER2 DNA MER2_type 2 97 -248 791 273 106 9 chr10 69228086 69228408 -71088357 - L1ME4a LINE L1 -253 5868 5516 1907 139 31 0 chr10 69228467 69228761 -71088004 - AluSx SINE Alu -9 303 1 417 20 0 0 chr10 69228767 69228817 -71087948 + (TG)n Simple_repeat Simple_repeat 2 51 0 2163 121 7 7 chr10 69229046 69229351 -71087414 + AluSx SINE Alu 1 305 -7 2289 107 3 0 chr10 69229449 69229757 -71087008 + AluSc SINE Alu 1 309 0 2204 127 0 0 chr10 69229775 69230074 -71086691 + AluSx SINE Alu 1 299 -13 2655 130 61 26 chr10 69230230 69230287 -71086478 - L1MA8 LINE L1 -2 6289 6235 183 80 0 0 chr10 69230287 69230312 -71086453 + (TA)n Simple_repeat Simple_repeat 2 26 0 2655 130 61 26 chr10 69230312 69230745 -71086020 - L1MA8 LINE L1 -56 6235 5782 2232 130 179 22 chr10 69230745 69231088 -71085677 - Tigger5 DNA MER2_type -2 2321 1901 2051 115 10 35 chr10 69231088 69231226 -71085539 + AluSg SINE Alu 1 141 -169 2360 94 0 0 chr10 69231226 69231524 -71085241 + AluY SINE Alu 1 298 -13 2051 115 10 35 chr10 69231524 69231697 -71085068 + AluSg SINE Alu 141 304 -6 2232 130 179 22 chr10 69231697 69231767 -71084998 - Tigger5 DNA MER2_type -422 1901 1843 1389 191 5 0 chr10 69231772 69231992 -71084773 - Tigger5 DNA MER2_type -2102 221 1 2759 114 36 83 chr10 69231992 69232519 -71084246 - L1MA8 LINE L1 -515 5785 5234 2467 73 0 6 chr10 69232519 69232832 -71083933 - AluY SINE Alu 0 311 1 1815 148 3 36 chr10 69232832 69233136 -71083629 - AluJb SINE Alu -18 294 1 2759 114 36 83 chr10 69233136 69233298 -71083467 - L1MA8 LINE L1 -1064 5236 5113 2151 121 0 0 chr10 69233878 69234198 -71082567 - AluSx SINE Alu 0 320 1 483 292 83 18 chr10 69234335 69234503 -71082262 + L1M4 LINE L1 204 382 -6160 1331 121 0 0 chr10 69234514 69234696 -71082069 - AluSg/x SINE Alu -7 303 122 2254 116 0 0 chr10 69234709 69235011 -71081754 - AluSx SINE Alu -10 302 1 5581 211 29 37 chr10 69235013 69235224 -71081541 + L1M4 LINE L1 391 602 -6044 2103 129 30 0 chr10 69235224 69235526 -71081239 + AluSx SINE Alu 1 311 -1 5581 211 29 37 chr10 69235526 69236656 -71080109 + L1M4 LINE L1 602 1708 -4938 1927 143 3 3 chr10 69236656 69236949 -71079816 + AluSx SINE Alu 5 297 -15 5581 211 29 37 chr10 69236949 69237300 -71079465 + L1M4 LINE L1 1708 2060 -4586 848 125 0 35 chr10 69237294 69237438 -71079327 + L1MB2 LINE L1 5352 5490 -693 * 1911 129 13 23 chr10 69237438 69237747 -71079018 + AluSx SINE Alu 2 307 -5 570 154 18 0 chr10 69237749 69237859 -71078906 + L1MB2 LINE L1 6059 6170 -1 2215 89 0 0 chr10 69237867 69238168 -71078597 + AluY SINE Alu 1 301 0 1307 185 98 45 chr10 69238179 69238465 -71078300 + AluJo SINE Alu 1 301 -1 494 253 48 48 chr10 69238476 69238705 -71078060 + L1M4 LINE L1 2265 2493 -4153 857 243 0 0 chr10 69238705 69238882 -71077883 + FRAM SINE Alu 1 176 0 960 92 18 12 chr10 69238894 69239057 -71077708 + (GAAA)n Simple_repeat Simple_repeat 3 166 0 1414 202 13 65 chr10 69239129 69239323 -71077442 + L1M4 LINE L1 2564 2766 -3878 1921 120 0 114 chr10 69239323 69239657 -71077108 + AluSx SINE Alu 2 297 -5 1414 202 13 65 chr10 69239657 69239715 -71077050 + L1M4 LINE L1 2766 2825 -3819 2311 68 7 0 chr10 69239715 69240040 -71076725 - AluSp SINE Alu 0 330 4 1414 202 13 65 chr10 69240040 69240345 -71076420 + L1M4 LINE L1 2825 3033 -3611 1267 155 14 0 chr10 69240345 69240552 -71076213 + MER2 DNA MER2_type 1 210 -135 838 154 0 42 chr10 69240596 69240739 -71076026 - FLAM_C SINE Alu -5 138 2 2237 107 0 13 chr10 69240743 69241043 -71075722 - AluSx SINE Alu -16 296 1 213 196 0 0 chr10 69241068 69241114 -71075651 + T-rich Low_complexity Low_complexity 1 46 0 1402 224 15 3 chr10 69241176 69241515 -71075250 + L1M4 LINE L1 3028 3370 -3274 * 2658 145 203 131 chr10 69241508 69241867 -71074898 + L1MC3 LINE L1 6732 7064 -721 343 207 46 46 chr10 69241867 69241954 -71074811 + MLT1F1 LTR MaLR 39 125 -442 2658 145 203 131 chr10 69241954 69242300 -71074465 + L1MC3 LINE L1 7064 7384 -401 1947 147 0 10 chr10 69242300 69242600 -71074165 + AluJo SINE Alu 1 297 -15 2658 145 203 131 chr10 69242600 69242666 -71074099 + L1MC3 LINE L1 7384 7444 -341 1526 165 79 38 chr10 69242666 69242957 -71073808 - AluJo SINE Alu -4 308 6 2658 145 203 131 chr10 69242957 69243075 -71073690 + L1MC3 LINE L1 7444 7779 -6 1347 171 43 39 chr10 69243079 69243201 -71073564 + MLT1F1 LTR MaLR 307 427 -140 1989 139 7 0 chr10 69243201 69243496 -71073269 + AluSx SINE Alu 1 297 -15 1347 171 43 39 chr10 69243496 69243631 -71073134 + MLT1F1 LTR MaLR 427 565 -2 2226 82 0 0 chr10 69244127 69244396 -71072369 - AluSc SINE Alu -40 269 1 1983 129 14 4 chr10 69244526 69244837 -71071928 - AluSx SINE Alu 0 314 1 2158 130 0 0 chr10 69244885 69245192 -71071573 + AluSg SINE Alu 1 307 -3 1992 146 0 3 chr10 69245203 69245504 -71071261 + AluSx SINE Alu 1 300 -12 257 386 71 20 chr10 69245565 69245819 -71070946 + L2 LINE L2 2826 3092 -180 1636 144 115 11 chr10 69245978 69246256 -71070509 - AluSx SINE Alu 0 312 6 258 226 43 118 chr10 69246662 69246688 -71070077 - MIR SINE MIR -65 143 117 2146 136 0 0 chr10 69246688 69246997 -71069768 + AluSc SINE Alu 1 309 0 258 226 43 118 chr10 69246997 69247063 -71069702 - MIR SINE MIR -91 117 58 2295 100 13 0 chr10 69247319 69247618 -71069147 + AluSg SINE Alu 1 303 -7 2080 123 0 3 chr10 69248793 69249100 -71067665 - AluSx SINE Alu 0 306 1 207 0 0 0 chr10 69249228 69249251 -71067514 + (CAAG)n Simple_repeat Simple_repeat 4 26 0 495 286 84 7 chr10 69249769 69249923 -71066842 + MIR SINE MIR 10 175 -87 1471 76 47 24 chr10 69250484 69250631 -71066134 - AluY SINE Alu -29 282 127 432 0 0 0 chr10 69250631 69250679 -71066086 + (TG)n Simple_repeat Simple_repeat 2 49 0 1471 76 47 24 chr10 69250679 69250742 -71066023 - AluY SINE Alu -184 127 67 1476 126 53 70 chr10 69250778 69251080 -71065685 - AluJb SINE Alu -15 297 1 914 216 43 35 chr10 69254330 69254613 -71062152 - L1MB7 LINE L1 -9 6175 5854 225 94 0 0 chr10 69255140 69255172 -71061593 + (T)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr10 69255346 69255368 -71061397 + AT_rich Low_complexity Low_complexity 1 22 0 260 220 202 18 chr10 69255662 69255771 -71060994 - MIR SINE MIR -86 176 48 219 88 0 0 chr10 69257667 69257701 -71059064 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1253 81 6 0 chr10 69259609 69259769 -71056996 - AluY SINE Alu -20 291 131 2174 94 27 10 chr10 69259951 69260249 -71056516 - AluSg SINE Alu -7 303 1 859 160 13 13 chr10 69260731 69260887 -71055878 - AluSg/x SINE Alu -19 290 135 21 0 0 0 chr10 69262168 69262189 -71054576 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr10 69263730 69263755 -71053010 + (A)n Simple_repeat Simple_repeat 1 25 0 1002 110 110 0 chr10 69264475 69264620 -71052145 + AluSp SINE Alu 137 297 -16 694 191 32 8 chr10 69266230 69266356 -71050409 + FLAM_A SINE Alu 1 129 -4 872 47 19 0 chr10 69266564 69266671 -71050094 - L1MA1 LINE L1 0 6302 6194 1277 143 81 39 chr10 69266812 69267070 -71049695 + AluJo SINE Alu 37 305 -7 2382 92 3 3 chr10 69267200 69267505 -71049260 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 69268105 69268126 -71048639 + AT_rich Low_complexity Low_complexity 1 21 0 1753 156 3 62 chr10 69268136 69268457 -71048308 + AluJo SINE Alu 1 302 -10 199 208 257 40 chr10 69268459 69268560 -71048205 - MIR3 SINE MIR -22 186 64 501 209 39 39 chr10 69268689 69268818 -71047947 - MIR3 SINE MIR -27 181 53 440 297 19 53 chr10 69268845 69269054 -71047711 + HAL1 LINE L1 582 783 -1724 2037 62 0 0 chr10 69269270 69269511 -71047254 - AluY SINE Alu -70 241 1 24 0 0 0 chr10 69269513 69269537 -71047228 + AT_rich Low_complexity Low_complexity 1 24 0 191 30 0 61 chr10 69269665 69269698 -71047067 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 2125 110 0 3 chr10 69269702 69269984 -71046781 - AluSx SINE Alu -31 281 1 377 264 24 8 chr10 69269984 69270109 -71046656 + L1MC5 LINE L1 7321 7447 -514 2284 101 10 0 chr10 69270378 69270684 -71046081 - AluSp SINE Alu -4 309 1 2342 102 0 19 chr10 69270796 69271109 -71045656 - AluSg SINE Alu -3 307 1 2428 86 0 3 chr10 69271119 69271421 -71045344 - AluSc SINE Alu -8 301 1 356 297 28 14 chr10 69271623 69271768 -71044997 - HAL1 LINE L1 -677 1830 1684 2139 107 7 0 chr10 69271902 69272183 -71044582 + AluSx SINE Alu 22 304 -8 781 215 0 28 chr10 69272221 69272365 -71044400 - FLAM_C SINE Alu -1 142 3 742 262 97 78 chr10 69272365 69272755 -71044010 + HAL1 LINE L1 1637 2039 -468 2155 107 32 0 chr10 69272755 69273036 -71043729 + AluSg SINE Alu 1 290 -20 742 262 97 78 chr10 69273036 69273142 -71043623 + HAL1 LINE L1 2039 2142 -365 2248 104 7 0 chr10 69273157 69273455 -71043310 + AluSx SINE Alu 1 300 -12 1056 134 6 0 chr10 69273457 69273614 -71043151 + AluSg/x SINE Alu 136 293 -19 1784 169 3 0 chr10 69273634 69273924 -71042841 + AluJo SINE Alu 11 301 -11 24 0 0 0 chr10 69273928 69273952 -71042813 + AT_rich Low_complexity Low_complexity 1 24 0 502 234 22 49 chr10 69274018 69274202 -71042563 + HAL1 LINE L1 2245 2423 -84 22 0 0 0 chr10 69274236 69274258 -71042507 + AT_rich Low_complexity Low_complexity 1 22 0 1401 156 62 27 chr10 69274312 69274568 -71042197 - AluJb SINE Alu -45 267 3 191 253 195 0 chr10 69274593 69274680 -71042085 + L3 LINE CR1 1402 1505 -72 474 253 78 42 chr10 69274708 69274874 -71041891 - MIR SINE MIR -44 218 47 2158 133 0 0 chr10 69274952 69275253 -71041512 - AluSx SINE Alu -11 301 1 2687 48 0 0 chr10 69275739 69276048 -71040717 + AluY SINE Alu 1 309 -2 364 235 291 25 chr10 69276081 69276277 -71040488 - MIR SINE MIR -4 258 11 2107 125 7 7 chr10 69276328 69276633 -71040132 + AluSx SINE Alu 1 305 -7 1977 133 7 3 chr10 69276668 69276954 -71039811 - AluSx SINE Alu -24 288 2 2035 115 13 26 chr10 69276984 69277297 -71039468 + AluSx SINE Alu 1 309 -3 2183 119 0 10 chr10 69277336 69277638 -71039127 - AluSx SINE Alu -13 299 1 23 33 0 0 chr10 69277646 69277676 -71039089 + AT_rich Low_complexity Low_complexity 1 30 0 1943 152 0 10 chr10 69278015 69278332 -71038433 + AluSx SINE Alu 4 312 0 2223 99 0 0 chr10 69278735 69279018 -71037747 + AluSx SINE Alu 1 283 -29 1462 119 5 0 chr10 69279203 69279396 -71037369 + AluSx SINE Alu 1 194 -118 222 118 0 0 chr10 69279401 69279435 -71037330 + (TA)n Simple_repeat Simple_repeat 1 34 0 238 208 10 83 chr10 69279456 69279552 -71037213 + L1MC4 LINE L1 6614 6702 -1340 203 80 8 96 chr10 69279575 69279700 -71037065 + (TA)n Simple_repeat Simple_repeat 1 114 0 22 0 0 0 chr10 69279750 69279772 -71036993 + AT_rich Low_complexity Low_complexity 1 22 0 968 112 15 0 chr10 69279775 69279909 -71036856 + AluSg/x SINE Alu 160 295 -17 1479 93 10 0 chr10 69280036 69280230 -71036535 - AluSx SINE Alu -116 196 1 1050 176 112 97 chr10 69280259 69280537 -71036228 + AluJo SINE Alu 1 282 -30 25 0 0 0 chr10 69280537 69280562 -71036203 + AT_rich Low_complexity Low_complexity 1 25 0 2258 75 0 17 chr10 69280568 69280860 -71035905 + AluY SINE Alu 1 287 -24 612 125 0 0 chr10 69280924 69281035 -71035730 + AluSg/x SINE Alu 200 310 0 2094 95 31 17 chr10 69281107 69281401 -71035364 + AluSq SINE Alu 1 298 -15 422 232 12 0 chr10 69281521 69281603 -71035162 + L2 LINE L2 3231 3313 0 231 148 204 0 chr10 69281606 69281660 -71035105 + MIR SINE MIR 186 250 -12 1705 182 0 19 chr10 69282149 69282462 -71034303 + AluJo SINE Alu 1 307 -5 1739 174 37 0 chr10 69282616 69282915 -71033850 + AluJo SINE Alu 1 310 -2 1855 119 56 18 chr10 69283301 69283586 -71033179 - AluSg SINE Alu -14 296 1 233 292 31 21 chr10 69284464 69284560 -71032205 + L1ME4a LINE L1 5932 6028 -93 660 145 30 46 chr10 69284822 69284953 -71031812 - FLAM_A SINE Alu -4 138 10 21 36 0 0 chr10 69285183 69285211 -71031554 + AT_rich Low_complexity Low_complexity 1 28 0 3283 184 26 2 chr10 69285355 69285936 -71030829 + MER6A DNA MER2_type 11 605 0 2024 137 0 13 chr10 69286161 69286467 -71030298 + AluSx SINE Alu 11 312 0 2050 124 4 0 chr10 69286567 69286842 -71029923 + AluSx SINE Alu 1 276 -36 399 83 89 6 chr10 69286846 69287003 -71029762 + (TA)n Simple_repeat Simple_repeat 2 171 0 1995 99 0 0 chr10 69287006 69287259 -71029506 + AluSg SINE Alu 13 265 -45 984 190 0 17 chr10 69287554 69287733 -71029032 - FRAM SINE Alu -8 168 1 499 212 8 8 chr10 69287733 69287865 -71028900 + CT-rich Low_complexity Low_complexity 1 132 0 868 169 0 0 chr10 69287870 69288006 -71028759 - FLAM_C SINE Alu -7 136 1 2336 80 0 13 chr10 69288074 69288374 -71028391 - AluSg SINE Alu -14 296 1 2302 100 3 0 chr10 69288487 69288787 -71027978 + AluSp SINE Alu 4 304 -9 1621 256 25 18 chr10 69288787 69289225 -71027540 + L1MDa LINE L1 120 560 -5980 1566 189 59 104 chr10 69289228 69289314 -71027451 + MSTC LTR MaLR 1 89 -339 2154 137 0 0 chr10 69289314 69289621 -71027144 + AluJb SINE Alu 6 312 0 1566 189 59 104 chr10 69289621 69289746 -71027019 + MSTC LTR MaLR 89 218 -210 878 158 0 0 chr10 69289746 69289873 -71026892 + AluJo SINE Alu 1 127 -175 1566 189 59 104 chr10 69289873 69290104 -71026661 + MSTC LTR MaLR 218 424 -4 2012 121 3 7 chr10 69290108 69290405 -71026360 + AluSq SINE Alu 1 296 -17 228 67 0 0 chr10 69290544 69290574 -71026191 + (T)n Simple_repeat Simple_repeat 1 30 0 890 185 20 46 chr10 69290591 69290786 -71025979 + AluJo SINE Alu 123 312 0 530 187 93 22 chr10 69290786 69290925 -71025840 + L1MDa LINE L1 1297 1445 -5095 1311 82 16 33 chr10 69290938 69290957 -71025808 + AluSc SINE Alu 114 132 -177 2429 83 0 0 chr10 69290957 69291257 -71025508 + AluY SINE Alu 1 300 -11 1935 123 34 7 chr10 69291257 69291549 -71025216 + AluSg SINE Alu 1 301 -9 1311 82 16 33 chr10 69291549 69291710 -71025055 + AluSc SINE Alu 130 292 -17 2728 193 93 63 chr10 69291710 69292115 -71024650 + L1MDa LINE L1 1513 1904 -4636 1376 180 46 49 chr10 69292115 69292233 -71024532 + AluJo SINE Alu 1 118 -194 1772 171 31 10 chr10 69292233 69292526 -71024239 + AluJo SINE Alu 1 299 -13 1376 180 46 49 chr10 69292526 69292712 -71024053 + AluJo SINE Alu 118 304 -8 1740 156 3 60 chr10 69292714 69293029 -71023736 + AluJb SINE Alu 1 297 -15 2728 193 93 63 chr10 69293029 69293591 -71023174 + L1MDa LINE L1 1904 2447 -4093 1637 185 10 27 chr10 69293591 69293889 -71022876 + AluJo SINE Alu 1 293 -19 2728 193 93 63 chr10 69293889 69293938 -71022827 + L1MDa LINE L1 2447 2493 -4047 1726 150 35 38 chr10 69293938 69294251 -71022514 + AluJo SINE Alu 1 312 0 897 142 0 15 chr10 69294261 69294395 -71022370 + FLAM_C SINE Alu 2 133 0 2728 193 93 63 chr10 69294395 69294756 -71022009 + L1MDa LINE L1 2501 3011 -3529 312 305 55 55 chr10 69294896 69295168 -71021597 - L1ME4a LINE L1 -1 6120 5849 772 192 8 23 chr10 69295219 69295349 -71021416 + FLAM_C SINE Alu 2 129 -4 1797 78 4 0 chr10 69295354 69295586 -71021179 + L1PA14 LINE L1 5929 6161 0 2476 70 0 7 chr10 69295599 69295897 -71020868 + AluY SINE Alu 1 296 -15 2070 119 0 41 chr10 69295923 69296243 -71020522 + AluSx SINE Alu 2 308 -4 2261 96 0 10 chr10 69296250 69296543 -71020222 + AluSq SINE Alu 1 290 -23 441 0 0 0 chr10 69296549 69296598 -71020167 + (TA)n Simple_repeat Simple_repeat 2 50 0 21 71 0 0 chr10 69296793 69296835 -71019930 + AT_rich Low_complexity Low_complexity 1 42 0 211 200 0 0 chr10 69297619 69297654 -71019111 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr10 69298604 69298625 -71018140 + AT_rich Low_complexity Low_complexity 1 21 0 201 186 23 0 chr10 69299472 69299515 -71017250 + GA-rich Low_complexity Low_complexity 3 46 0 279 54 0 0 chr10 69299664 69299701 -71017064 + (TG)n Simple_repeat Simple_repeat 2 38 0 483 207 11 0 chr10 69299701 69299788 -71016977 - FLAM_A SINE Alu -21 121 34 2353 75 7 3 chr10 69299919 69300214 -71016551 - AluY SINE Alu -15 296 1 893 131 15 0 chr10 69300215 69300345 -71016420 - AluJo/FLAM SINE Alu -170 132 1 215 190 35 0 chr10 69300361 69300373 -71016392 + A-rich Low_complexity Low_complexity 1 11 -49 696 100 108 85 chr10 69300373 69300503 -71016262 + FLAM_C SINE Alu 1 133 0 215 190 35 0 chr10 69300503 69300548 -71016217 + A-rich Low_complexity Low_complexity 11 60 0 2321 109 0 0 chr10 69300686 69300990 -71015775 + AluSx SINE Alu 1 304 -8 1985 138 0 10 chr10 69301669 69301959 -71014806 + AluSx SINE Alu 1 287 -25 1264 120 0 0 chr10 69302152 69302335 -71014430 - AluY SINE Alu -9 302 120 2560 74 0 0 chr10 69302647 69302958 -71013807 + AluY SINE Alu 1 311 0 311 208 133 33 chr10 69303001 69303121 -71013644 + L1ME3A LINE L1 6039 6170 0 302 214 180 0 chr10 69303165 69303254 -71013511 + MER112 DNA MER1_type 152 256 -4 1974 157 0 0 chr10 69303257 69303543 -71013222 + AluSx SINE Alu 1 286 -26 2141 124 0 3 chr10 69303551 69303849 -71012916 + AluSx SINE Alu 1 297 -15 2460 68 0 7 chr10 69305196 69305492 -71011273 + AluSg SINE Alu 1 294 -16 770 82 0 0 chr10 69305820 69305918 -71010847 - L1PA8 LINE L1 -2 6170 6073 2294 89 3 0 chr10 69306570 69306861 -71009904 - AluSg SINE Alu -18 292 1 2345 95 0 0 chr10 69307289 69307584 -71009181 + AluSq SINE Alu 1 295 -18 271 262 76 75 chr10 69307864 69307937 -71008828 + MIR SINE MIR 38 109 -153 2296 108 0 0 chr10 69307937 69308244 -71008521 + AluSg SINE Alu 1 307 -3 271 262 76 75 chr10 69308244 69308368 -71008397 + MIR SINE MIR 109 235 -27 2078 113 14 3 chr10 69308398 69308681 -71008084 + AluSg SINE Alu 1 286 -24 1748 166 6 10 chr10 69308769 69309082 -71007683 + AluJb SINE Alu 1 312 0 1593 175 10 26 chr10 69309103 69309411 -71007354 - AluJb SINE Alu -7 305 3 2140 115 7 3 chr10 69309525 69309821 -71006944 + AluSg SINE Alu 1 297 -13 807 181 19 25 chr10 69309859 69310019 -71006746 + AluSg/x SINE Alu 134 292 -20 377 282 149 28 chr10 69310019 69310274 -71006491 + L1MC4a LINE L1 5874 6159 -1649 406 172 101 10 chr10 69310514 69310613 -71006152 - L1ME4a LINE L1 -4 6117 6010 861 166 13 25 chr10 69310689 69310846 -71005919 + MER33 DNA MER1_type 1 155 -169 785 183 8 8 chr10 69310848 69310974 -71005791 - FLAM_A SINE Alu -7 126 1 1039 162 0 54 chr10 69310983 69311149 -71005616 - AluJo SINE Alu -14 298 141 2316 101 0 3 chr10 69311149 69311447 -71005318 - AluSx SINE Alu -12 300 4 1039 162 0 54 chr10 69311447 69311465 -71005300 - AluJo SINE Alu -171 141 124 301 172 103 0 chr10 69311465 69311581 -71005184 + MER33 DNA MER1_type 204 331 -32 1899 151 10 26 chr10 69311581 69311892 -71004873 + AluJb SINE Alu 1 306 -6 2043 108 0 21 chr10 69311892 69312216 -71004549 + AluSx SINE Alu 1 318 0 2137 97 10 27 chr10 69312385 69312685 -71004080 - AluSq SINE Alu -18 295 1 2222 85 16 39 chr10 69312996 69313302 -71003463 + AluSc SINE Alu 1 299 -10 23 33 0 0 chr10 69313631 69313661 -71003104 + AT_rich Low_complexity Low_complexity 1 30 0 2190 112 0 3 chr10 69313801 69314097 -71002668 + AluSx SINE Alu 1 295 -17 358 255 0 61 chr10 69314950 69314969 -71001796 - L1ME LINE L1 -507 5614 5595 2102 96 47 17 chr10 69314969 69315270 -71001495 - AluY SINE Alu -1 310 1 358 255 0 61 chr10 69315270 69315348 -71001417 - L1ME LINE L1 -526 5595 5523 669 91 0 0 chr10 69316254 69316342 -71000423 + AluSg/x SINE Alu 214 301 -9 2137 100 31 3 chr10 69316982 69317273 -70999492 - AluSx SINE Alu -13 299 1 1475 149 105 7 chr10 69318100 69318376 -70998389 - MER7A DNA MER2_type 0 346 46 1336 161 3 143 chr10 69318435 69318777 -70997988 + AluSx SINE Alu 5 298 -14 2127 132 0 0 chr10 69318830 69319134 -70997631 + AluSg SINE Alu 1 304 -6 2157 104 0 0 chr10 69319353 69319642 -70997123 + AluSx SINE Alu 1 289 -23 23 0 0 0 chr10 69319642 69319665 -70997100 + AT_rich Low_complexity Low_complexity 1 23 0 2003 127 3 41 chr10 69320013 69320328 -70996437 - AluSx SINE Alu -9 303 1 319 265 191 7 chr10 69320350 69320486 -70996279 + MIR SINE MIR 48 208 -54 267 81 0 0 chr10 69320738 69320775 -70995990 + Alu SINE Alu 1 37 -263 1900 109 11 7 chr10 69320775 69321058 -70995707 - AluSp SINE Alu -23 290 7 236 153 169 0 chr10 69321271 69321389 -70995376 + AluSc SINE Alu 2 139 -160 1077 137 0 12 chr10 69321498 69321666 -70995099 + AluSg/x SINE Alu 145 310 -2 2323 103 0 6 chr10 69321715 69322026 -70994739 + AluY SINE Alu 1 309 -2 2533 51 0 3 chr10 69322051 69322347 -70994418 + AluY SINE Alu 1 295 -16 22 35 0 0 chr10 69323411 69323440 -70993325 + AT_rich Low_complexity Low_complexity 1 29 0 794 129 0 71 chr10 69323443 69323583 -70993182 - FLAM_C SINE Alu -3 130 1 2262 121 0 7 chr10 69324160 69324466 -70992299 - AluSx SINE Alu -8 304 1 2100 101 4 7 chr10 69324576 69324853 -70991912 - AluSx SINE Alu -17 295 20 862 174 0 7 chr10 69325114 69325258 -70991507 - AluJb SINE Alu -14 298 156 236 135 0 27 chr10 69325261 69325298 -70991467 - AluSx SINE Alu -272 36 1 24 0 0 0 chr10 69325437 69325461 -70991304 + AT_rich Low_complexity Low_complexity 1 24 0 2527 81 0 0 chr10 69326353 69326662 -70990103 + AluSc SINE Alu 1 309 0 49 66 0 0 chr10 69328834 69328925 -70987840 + GC_rich Low_complexity Low_complexity 1 91 0 2288 84 7 10 chr10 69329268 69329576 -70987189 - AluSc SINE Alu -2 307 1 1376 152 0 0 chr10 69329695 69329892 -70986873 + AluSg SINE Alu 1 197 -113 830 70 0 0 chr10 69329894 69329994 -70986771 + AluSg/x SINE Alu 69 168 -144 1162 148 0 0 chr10 69330147 69330323 -70986442 - AluJb SINE Alu -16 296 121 204 111 0 0 chr10 69330412 69330448 -70986317 + (TA)n Simple_repeat Simple_repeat 1 36 0 210 37 0 0 chr10 69330555 69330582 -70986183 + (TG)n Simple_repeat Simple_repeat 2 28 0 1376 90 16 0 chr10 69330587 69330776 -70985989 - L1PA14 LINE L1 -11 6150 5959 810 155 31 0 chr10 69330779 69330908 -70985857 - AluSq/x SINE Alu -180 133 1 233 114 68 0 chr10 69330909 69330953 -70985812 - L1PA14 LINE L1 -187 5974 5928 948 137 0 22 chr10 69330954 69331093 -70985672 - AluJ SINE Alu -176 136 1 2214 114 0 13 chr10 69331494 69331802 -70984963 + AluSg SINE Alu 1 304 -6 1399 179 33 55 chr10 69331812 69332119 -70984646 + AluJo SINE Alu 1 300 -12 199 237 0 0 chr10 69332196 69332234 -70984531 - L2 LINE L2 -213 3059 3022 580 276 35 48 chr10 69332395 69332464 -70984301 - MER112 DNA MER1_type -13 247 179 2236 111 0 37 chr10 69332464 69332788 -70983977 - AluSx SINE Alu 0 312 1 580 276 35 48 chr10 69332788 69332946 -70983819 - MER112 DNA MER1_type -81 179 23 2256 114 0 3 chr10 69333033 69333339 -70983426 + AluSg SINE Alu 1 305 -5 2601 61 0 3 chr10 69333432 69333743 -70983022 - AluSq SINE Alu -3 310 1 2856 3 0 0 chr10 69333750 69334051 -70982714 - AluYa5 SINE Alu -10 301 1 2236 94 0 7 chr10 69334520 69334826 -70981939 - AluSq SINE Alu 0 313 6 183 80 0 0 chr10 69334883 69334908 -70981857 + (A)n Simple_repeat Simple_repeat 1 25 0 2457 41 34 17 chr10 69335239 69335534 -70981231 + AluY SINE Alu 1 300 -11 24 67 0 0 chr10 69335607 69335652 -70981113 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr10 69335787 69335808 -70980957 + AT_rich Low_complexity Low_complexity 1 21 0 2493 85 3 0 chr10 69336802 69337108 -70979657 - AluSp SINE Alu -6 307 1 1954 106 60 0 chr10 69337187 69337482 -70979283 - AluSc SINE Alu 0 311 1 779 224 19 13 chr10 69337532 69337688 -70979077 + AluJb SINE Alu 107 263 -49 1780 159 11 4 chr10 69337718 69337995 -70978770 + AluJb SINE Alu 1 279 -33 713 142 0 0 chr10 69338059 69338165 -70978600 + FLAM_C SINE Alu 2 107 -36 1507 168 62 48 chr10 69338494 69338785 -70977980 + AluJo SINE Alu 1 295 -17 204 111 0 0 chr10 69338909 69338945 -70977820 + (A)n Simple_repeat Simple_repeat 1 36 0 1365 178 51 12 chr10 69338950 69339203 -70977562 + AluJb SINE Alu 38 300 -12 2241 131 57 23 chr10 69339268 69339664 -70977101 + L1MB2 LINE L1 5714 6128 -43 2149 108 10 0 chr10 69339664 69339961 -70976804 + AluSq SINE Alu 1 300 -13 2241 131 57 23 chr10 69339961 69340000 -70976765 + L1MB2 LINE L1 6128 6164 -7 1140 123 6 0 chr10 69340026 69340197 -70976568 - L1PA8A LINE L1 -27 6104 5933 2486 76 3 0 chr10 69340202 69340505 -70976260 - AluSx SINE Alu -8 304 1 280 239 77 54 chr10 69341690 69341789 -70974976 - MIR SINE MIR -110 152 48 2260 104 0 0 chr10 69341789 69342086 -70974679 + AluSg SINE Alu 1 297 -13 280 239 77 54 chr10 69342086 69342116 -70974649 - MIR SINE MIR -214 48 20 443 132 0 0 chr10 69342260 69342336 -70974429 + AluS SINE Alu 229 304 -5 619 122 11 0 chr10 69342385 69342475 -70974290 + L1MC1 LINE L1 6231 6321 -12 2258 93 10 0 chr10 69342476 69342766 -70973999 - AluSx SINE Alu -17 295 3 2058 121 44 0 chr10 69343005 69343302 -70973463 + AluSx SINE Alu 1 310 -2 2111 116 0 0 chr10 69343370 69343645 -70973120 - AluSg SINE Alu -35 275 1 210 37 0 0 chr10 69344701 69344728 -70972037 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2777 202 125 29 chr10 69344740 69345754 -70971011 + L1MDa LINE L1 18 1342 -5198 1979 161 0 0 chr10 69345754 69346058 -70970707 + AluJo SINE Alu 1 304 -8 2417 87 0 3 chr10 69346617 69346926 -70969839 - AluSg SINE Alu -2 308 1 2451 64 0 3 chr10 69346935 69347233 -70969532 - AluY SINE Alu -14 297 1 31 0 0 0 chr10 69347292 69347323 -70969442 + AT_rich Low_complexity Low_complexity 1 31 0 1897 167 0 3 chr10 69347385 69347679 -70969086 + AluSx SINE Alu 1 293 -19 3717 153 125 49 chr10 69347680 69347788 -70968977 + L1MD1 LINE L1 5062 5160 -1082 2201 128 0 0 chr10 69347788 69348084 -70968681 + AluSx SINE Alu 1 296 -16 2423 76 0 13 chr10 69348086 69348400 -70968365 + AluY SINE Alu 1 310 -1 3717 153 125 49 chr10 69348400 69348619 -70968146 + L1MD1 LINE L1 5160 5361 -881 1979 98 76 0 chr10 69348619 69348896 -70967869 + AluSx SINE Alu 1 298 -14 3717 153 125 49 chr10 69348896 69348910 -70967855 + L1MD1 LINE L1 5361 5373 -869 1574 158 66 26 chr10 69348910 69349183 -70967582 + AluJb SINE Alu 1 284 -28 279 0 0 0 chr10 69349183 69349214 -70967551 + (CA)n Simple_repeat Simple_repeat 2 32 0 3717 153 125 49 chr10 69349214 69349284 -70967481 + L1MD1 LINE L1 5373 5436 -806 2285 98 0 3 chr10 69349284 69349579 -70967186 + AluSg SINE Alu 1 294 -16 2319 92 3 0 chr10 69349579 69349872 -70966893 + AluY SINE Alu 1 295 -16 3717 153 125 49 chr10 69349872 69350567 -70966198 + L1MD1 LINE L1 5435 6242 0 1477 82 0 5 chr10 69350781 69350795 -70965970 + AluY SINE Alu 119 132 -179 2230 110 3 0 chr10 69350795 69351095 -70965670 + AluSp SINE Alu 1 301 -12 1477 82 0 5 chr10 69351095 69351274 -70965491 + AluY SINE Alu 132 311 0 25 51 0 0 chr10 69351292 69351331 -70965434 + AT_rich Low_complexity Low_complexity 1 39 0 525 103 0 0 chr10 69351415 69351493 -70965272 - Alu SINE Alu -12 300 223 1107 169 0 0 chr10 69351594 69351772 -70964993 + FRAM SINE Alu 1 170 -6 742 260 55 28 chr10 69351773 69352027 -70964738 + L1ME3 LINE L1 5899 6159 -3 1941 108 67 27 chr10 69352027 69352351 -70964414 - AluSg SINE Alu 0 310 1 1360 186 15 34 chr10 69353018 69353282 -70963483 + AluJo SINE Alu 1 259 -53 386 155 0 42 chr10 69353283 69353354 -70963411 - AluJ/FLAM SINE Alu -233 69 2 231 114 0 0 chr10 69353377 69353412 -70963353 + (A)n Simple_repeat Simple_repeat 1 35 0 2346 95 0 7 chr10 69353456 69353751 -70963014 - AluSq SINE Alu -20 293 1 316 324 91 49 chr10 69355021 69355690 -70961075 + L2 LINE L2 2077 2773 -541 1232 185 0 5 chr10 69355702 69355913 -70960852 - AluJo SINE Alu -18 294 85 2056 126 14 0 chr10 69356164 69356449 -70960316 + AluSx SINE Alu 6 294 -18 1794 177 7 13 chr10 69356532 69356832 -70959933 + AluJb SINE Alu 1 298 -14 244 264 47 57 chr10 69357111 69357217 -70959548 - MLT1J1 LTR MaLR -341 105 1 1667 165 20 17 chr10 69357218 69357515 -70959250 - AluJb SINE Alu -14 298 1 185 91 0 30 chr10 69357611 69357636 -70959129 + (TA)n Simple_repeat Simple_repeat 2 27 -6 1992 106 14 11 chr10 69357636 69357920 -70958845 - AluY SINE Alu -26 285 1 185 91 0 30 chr10 69357920 69357927 -70958838 + (TA)n Simple_repeat Simple_repeat 27 33 0 2920 178 31 15 chr10 69358180 69358766 -70957999 + L1MB5 LINE L1 5574 6168 -6 1988 154 8 56 chr10 69358766 69359160 -70957605 + L1MB8 LINE L1 5802 6178 0 1985 126 3 46 chr10 69359520 69359845 -70956920 + AluSq SINE Alu 1 311 -2 1378 155 0 18 chr10 69359952 69360178 -70956587 - AluSx SINE Alu -90 222 1 2379 87 3 0 chr10 69360404 69360704 -70956061 + AluSp SINE Alu 1 301 -12 2279 97 7 0 chr10 69360918 69361216 -70955549 + AluSx SINE Alu 1 300 -12 2191 124 3 0 chr10 69361279 69361578 -70955187 + AluSp SINE Alu 1 300 -13 2126 101 3 20 chr10 69361585 69361722 -70955043 + AluY SINE Alu 1 139 -172 2262 107 3 3 chr10 69361722 69362022 -70954743 + AluSp SINE Alu 1 300 -13 2126 101 3 20 chr10 69362022 69362181 -70954584 + AluY SINE Alu 139 292 -19 1763 148 42 0 chr10 69362188 69362452 -70954313 + AluSx SINE Alu 1 275 -37 1993 138 7 0 chr10 69362571 69362861 -70953904 - AluY SINE Alu -19 292 1 753 203 0 0 chr10 69363163 69363281 -70953484 + FLAM_C SINE Alu 1 118 -15 1786 167 10 20 chr10 69363320 69363626 -70953139 + AluJo SINE Alu 6 308 -4 2038 138 3 0 chr10 69363760 69364051 -70952714 + AluSg SINE Alu 1 292 -18 1657 158 48 0 chr10 69364198 69364471 -70952294 - AluJb SINE Alu -18 294 9 1283 103 0 0 chr10 69364485 69364650 -70952115 - AluSg/x SINE Alu -14 296 132 2097 87 8 0 chr10 69364650 69364915 -70951850 - AluSq SINE Alu -10 303 37 2107 120 7 10 chr10 69365931 69366232 -70950533 + AluSq SINE Alu 1 300 -13 971 118 0 0 chr10 69366245 69366372 -70950393 + AluSq/x SINE Alu 7 133 -179 2293 80 7 3 chr10 69366375 69366705 -70950060 + AluSc SINE Alu 2 309 0 2239 110 3 3 chr10 69366707 69367015 -70949750 + AluSp SINE Alu 1 308 -5 1993 136 7 0 chr10 69367447 69367768 -70948997 + AluSq SINE Alu 1 313 0 22 99 0 0 chr10 69368030 69368101 -70948664 + AT_rich Low_complexity Low_complexity 1 71 0 2018 152 10 0 chr10 69368109 69368406 -70948359 + AluSx SINE Alu 1 300 -12 815 119 0 0 chr10 69368859 69368968 -70947797 + FLAM_C SINE Alu 1 109 -34 2527 136 20 20 chr10 69368976 69369418 -70947347 + L1MA2 LINE L1 5863 6304 0 2251 122 3 0 chr10 69369500 69369804 -70946961 + AluSx SINE Alu 1 305 -7 932 198 12 0 chr10 69369804 69369966 -70946799 + AluJb SINE Alu 134 297 -15 2576 41 7 3 chr10 69369966 69370261 -70946504 + AluY SINE Alu 1 296 -15 1710 118 122 0 chr10 69371038 69371197 -70945568 - AluSx SINE Alu -8 304 166 465 19 0 0 chr10 69371197 69371251 -70945514 + (TG)n Simple_repeat Simple_repeat 2 55 0 1710 118 122 0 chr10 69371251 69371362 -70945403 - AluSx SINE Alu -146 166 1 921 158 0 7 chr10 69371758 69371904 -70944861 + AluJb SINE Alu 1 145 -167 1832 101 40 4 chr10 69371906 69372154 -70944611 + AluSg SINE Alu 1 257 -53 710 127 0 0 chr10 69372154 69372264 -70944501 + AluY SINE Alu 198 307 -4 1081 164 33 0 chr10 69372637 69372820 -70943945 + MER5A DNA MER1_type 1 189 0 1687 135 12 8 chr10 69373126 69373385 -70943380 + AluSx SINE Alu 46 305 -7 823 153 8 0 chr10 69374030 69374154 -70942611 - AluSq/x SINE Alu -188 125 1 26 0 0 0 chr10 69374211 69374237 -70942528 + AT_rich Low_complexity Low_complexity 1 26 0 1303 210 54 20 chr10 69374342 69374637 -70942128 - AluJb SINE Alu -7 305 1 1724 166 0 41 chr10 69374832 69375148 -70941617 - AluJb SINE Alu 0 304 1 2260 108 3 3 chr10 69375169 69375465 -70941300 - AluSx SINE Alu -16 296 1 335 329 53 0 chr10 69375625 69375777 -70940988 - L1M4 LINE L1 -3298 2848 2689 521 195 154 0 chr10 69375787 69375910 -70940855 + Tigger3(Golem) DNA MER2_type 1 142 -2887 * 1653 129 20 8 chr10 69375907 69376162 -70940603 + Tigger3(Golem) DNA MER2_type 2772 3029 0 205 372 0 0 chr10 69376480 69376558 -70940207 + L2 LINE L2 3187 3264 -8 204 40 0 0 chr10 69376663 69376688 -70940077 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2326 104 0 0 chr10 69376788 69377085 -70939680 + AluSx SINE Alu 1 297 -15 203 211 77 0 chr10 69377108 69377160 -70939605 + GA-rich Low_complexity Low_complexity 3 58 0 2180 125 0 0 chr10 69377481 69377777 -70938988 + AluSx SINE Alu 1 296 -16 2176 131 0 6 chr10 69377840 69378154 -70938611 + AluSx SINE Alu 1 312 0 2222 114 3 7 chr10 69378157 69378464 -70938301 + AluSx SINE Alu 1 306 -6 2361 136 40 6 chr10 69378932 69379337 -70937428 + L1MB3 LINE L1 5724 6142 -41 2005 126 0 0 chr10 69379337 69379614 -70937151 + AluSg SINE Alu 1 277 -33 303 71 0 0 chr10 69379614 69379656 -70937109 + (CA)n Simple_repeat Simple_repeat 1 42 0 1989 166 0 6 chr10 69379685 69379999 -70936766 - AluSx SINE Alu 0 312 1 1973 135 35 0 chr10 69380010 69380298 -70936467 - AluSq SINE Alu -15 298 1 953 189 6 0 chr10 69380355 69380514 -70936251 + FRAM SINE Alu 1 160 -16 656 253 62 0 chr10 69380794 69380988 -70935777 + Charlie1b DNA MER1_type 51 256 -267 831 125 8 0 chr10 69380997 69381117 -70935648 + 5S rRNA rRNA 1 121 0 2402 98 3 0 chr10 69381137 69381443 -70935322 + AluSp SINE Alu 1 307 -6 473 221 0 19 chr10 69381453 69381557 -70935208 + FRAM SINE Alu 72 173 -3 692 135 98 138 chr10 69381561 69381679 -70935086 + Charlie1b DNA MER1_type 239 360 -2401 2034 124 11 3 chr10 69381679 69381961 -70934804 + AluSx SINE Alu 1 284 -28 692 135 98 138 chr10 69381961 69382139 -70934626 + Charlie1b DNA MER1_type 360 523 0 571 215 153 11 chr10 69382255 69382432 -70934333 + MIR SINE MIR 47 248 -14 2039 118 20 10 chr10 69382437 69382733 -70934032 + AluSx SINE Alu 1 299 -13 2590 53 0 0 chr10 69382753 69383053 -70933712 + AluY SINE Alu 1 300 -11 1136 85 12 30 chr10 69383111 69383275 -70933490 + AluY SINE Alu 137 297 -14 349 267 0 0 chr10 69383743 69383818 -70932947 + L1ME4a LINE L1 5523 5597 -2211 2009 130 0 7 chr10 69383821 69384130 -70932635 + AluSx SINE Alu 1 307 0 2337 71 17 0 chr10 69384158 69384452 -70932313 + AluSp SINE Alu 14 312 -1 579 196 0 53 chr10 69384464 69384597 -70932168 + FLAM_A SINE Alu 1 126 -7 2539 64 3 0 chr10 69384612 69384910 -70931855 - AluY SINE Alu -12 299 1 251 263 11 32 chr10 69385488 69385583 -70931182 + L1ME4a LINE L1 5961 6053 -68 1566 126 0 31 chr10 69385615 69385838 -70930927 - AluSg/x SINE Alu -13 297 82 27 81 0 0 chr10 69385873 69385935 -70930830 + AT_rich Low_complexity Low_complexity 1 62 0 2447 70 0 3 chr10 69386174 69386472 -70930293 - AluY SINE Alu -14 297 1 560 155 240 0 chr10 69386501 69386630 -70930135 + AluJb SINE Alu 137 296 -16 2075 120 10 0 chr10 69386711 69387002 -70929763 - AluSg SINE Alu -16 294 1 256 172 103 0 chr10 69387073 69387131 -70929634 + L1MC5 LINE L1 7845 7908 -53 1245 128 0 0 chr10 69387144 69387316 -70929449 - AluSg/x SINE Alu -12 300 129 33 66 0 0 chr10 69387408 69387469 -70929296 + AT_rich Low_complexity Low_complexity 1 61 0 681 236 11 17 chr10 69387488 69387666 -70929099 + MIR SINE MIR 35 211 -51 2383 88 3 0 chr10 69388362 69388669 -70928096 + AluSx SINE Alu 1 308 -4 1154 38 0 8 chr10 69388857 69388990 -70927775 + AluY SINE Alu 1 132 -179 2329 102 0 7 chr10 69389055 69389358 -70927407 - AluSp SINE Alu -12 301 1 927 183 0 24 chr10 69390061 69390230 -70926535 + FRAM SINE Alu 1 165 -1 511 32 0 0 chr10 69391775 69391837 -70924928 - AluYa5 SINE Alu -99 212 151 349 290 75 81 chr10 69391976 69392046 -70924719 + L2 LINE L2 1399 1468 -1846 1870 97 57 11 chr10 69392046 69392325 -70924440 + AluSg SINE Alu 1 292 -18 349 290 75 81 chr10 69392325 69392561 -70924204 + L2 LINE L2 1468 1703 -1611 2105 122 7 7 chr10 69392719 69393014 -70923751 + AluSx SINE Alu 2 296 -16 550 197 169 67 chr10 69393115 69393248 -70923517 - MLT1G1 LTR MaLR -390 205 48 2096 124 10 0 chr10 69393248 69393538 -70923227 + AluSx SINE Alu 5 297 -15 550 197 169 67 chr10 69393538 69393582 -70923183 - MLT1G1 LTR MaLR -547 48 10 1328 233 89 33 chr10 69393597 69393880 -70922885 - L1M4 LINE L1 -2137 4009 3687 1726 192 0 13 chr10 69393880 69394188 -70922577 - AluJo SINE Alu -8 304 1 1328 233 89 33 chr10 69394188 69394385 -70922380 - L1M4 LINE L1 -2459 3687 3502 2557 67 0 0 chr10 69394386 69394685 -70922080 - AluY SINE Alu -12 299 1 2242 105 20 0 chr10 69394782 69395076 -70921689 - AluSp SINE Alu -13 300 1 1686 183 25 14 chr10 69395089 69395374 -70921391 - AluJb SINE Alu -24 288 1 285 216 124 0 chr10 69395378 69395475 -70921290 - L1M4 LINE L1 -2665 3481 3373 1630 184 9 22 chr10 69395477 69395793 -70920972 - AluJb SINE Alu 0 312 1 2084 128 0 0 chr10 69395885 69396182 -70920583 - AluSp SINE Alu -3 310 14 311 256 15 66 chr10 69396227 69396295 -70920470 + L2 LINE L2 2690 2749 -565 2234 119 0 0 chr10 69396295 69396597 -70920168 - AluSx SINE Alu -10 302 1 311 256 15 66 chr10 69396597 69396665 -70920100 + L2 LINE L2 2749 2819 -495 1717 102 4 0 chr10 69396673 69396898 -70919867 - AluSg/x SINE Alu -8 304 79 2295 116 0 3 chr10 69396900 69397210 -70919555 - AluSg SINE Alu -1 309 1 606 111 0 0 chr10 69397210 69397291 -70919474 - AluSc SINE Alu -224 85 5 448 351 20 36 chr10 69397296 69397544 -70919221 + L2 LINE L2 2818 3061 -252 716 291 56 20 chr10 69397677 69397928 -70918837 + MIR SINE MIR 3 262 0 53 53 0 30 chr10 69398098 69398156 -70918609 + AT_rich Low_complexity Low_complexity 1 59 -69 673 198 0 0 chr10 69398156 69398272 -70918493 - FLAM_C SINE Alu -17 116 1 53 53 0 30 chr10 69398272 69398345 -70918420 + AT_rich Low_complexity Low_complexity 59 128 0 2362 96 0 3 chr10 69398347 69398649 -70918116 - AluSc SINE Alu -8 301 1 1962 130 6 43 chr10 69399117 69399441 -70917324 + AluSx SINE Alu 1 312 0 1024 161 17 11 chr10 69399443 69399623 -70917142 + AluSg/x SINE Alu 121 301 -11 2412 95 0 0 chr10 69400084 69400389 -70916376 - AluY SINE Alu -6 305 1 2060 96 0 4 chr10 69400617 69400878 -70915887 - AluSq SINE Alu -53 260 1 872 119 0 22 chr10 69401057 69401191 -70915574 - FLAM_C SINE Alu 0 133 3 1963 129 36 0 chr10 69401217 69401497 -70915268 - AluSx SINE Alu -22 290 1 2313 73 3 23 chr10 69401525 69401827 -70914938 + AluY SINE Alu 1 296 -15 442 121 0 15 chr10 69402496 69402562 -70914203 - AluS SINE Alu -247 66 2 1130 251 7 14 chr10 69402569 69402844 -70913921 - AluSg SINE Alu -14 296 24 359 310 15 36 chr10 69403015 69403446 -70913319 + CT-rich Low_complexity Low_complexity 1 422 0 2368 84 3 10 chr10 69403746 69404055 -70912710 - AluSp SINE Alu -6 307 1 275 144 2 99 chr10 69404077 69404175 -70912590 + AluS SINE Alu 1 73 -230 216 267 12 12 chr10 69404518 69404604 -70912161 + CT-rich Low_complexity Low_complexity 3 88 0 5578 109 25 12 chr10 69404925 69405855 -70910910 + L1PA13 LINE L1 5206 6145 -18 515 87 0 0 chr10 69406320 69406389 -70910376 + MSTA LTR MaLR 360 428 0 656 134 31 16 chr10 69406392 69406519 -70910246 + L1MC1 LINE L1 6013 6141 -192 645 232 0 0 chr10 69406539 69406677 -70910088 + L1MC1 LINE L1 6130 6267 -66 4394 97 2 0 chr10 69406685 69407273 -70909492 + L1P LINE L1 2 590 -5556 416 344 49 27 chr10 69407522 69407746 -70909019 - MLT1H LTR MaLR -237 312 84 26 50 0 0 chr10 69407913 69407953 -70908812 + AT_rich Low_complexity Low_complexity 1 40 0 2314 98 0 0 chr10 69409604 69409899 -70906866 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 69410491 69410512 -70906253 + AT_rich Low_complexity Low_complexity 1 21 0 23 87 0 0 chr10 69410580 69410626 -70906139 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr10 69410832 69410856 -70905909 + AT_rich Low_complexity Low_complexity 1 24 0 1020 207 30 42 chr10 69411397 69411608 -70905157 - L1MDa LINE L1 -5156 1384 1177 3629 143 4 2 chr10 69411608 69412161 -70904604 + MER41A LTR ERV1 1 554 0 1020 207 30 42 chr10 69412161 69412282 -70904483 - L1MDa LINE L1 -5363 1177 1056 668 241 44 35 chr10 69412464 69412692 -70904073 - MER67C LTR ERV1 -311 399 170 5024 163 8 5 chr10 69413034 69414251 -70902514 + L1PA7 LINE L1 4932 6152 -2 346 275 87 7 chr10 69414730 69414879 -70901886 - MLT1A2 LTR MaLR -24 350 190 24 0 0 0 chr10 69414916 69414940 -70901825 + AT_rich Low_complexity Low_complexity 1 24 0 843 134 8 0 chr10 69415112 69415239 -70901526 + AluSp/q SINE Alu 175 302 -11 1693 141 28 14 chr10 69415483 69415767 -70900998 - AluJb SINE Alu -12 300 13 760 175 21 14 chr10 69416365 69416508 -70900257 - AluJb SINE Alu -24 288 145 2238 110 3 10 chr10 69416532 69416841 -70899924 - AluSq SINE Alu -6 307 1 649 178 96 0 chr10 69416842 69416988 -70899777 + AluJb SINE Alu 115 274 -38 1629 90 0 5 chr10 69417212 69417434 -70899331 - AluSg/x SINE Alu -10 302 82 2266 109 0 0 chr10 69417434 69417726 -70899039 - AluSx SINE Alu -19 293 1 747 165 31 0 chr10 69417728 69417855 -70898910 - AluJo/FLAM SINE Alu -179 133 3 2232 93 0 0 chr10 69417868 69418147 -70898618 - AluSg SINE Alu -20 290 12 1173 137 6 0 chr10 69418147 69418322 -70898443 + AluSp SINE Alu 136 311 -2 530 286 110 10 chr10 69418324 69418614 -70898151 + L2 LINE L2 2740 3073 -240 1184 126 0 11 chr10 69418639 69418857 -70897908 - AluSc SINE Alu 0 309 123 241 120 11 54 chr10 69418904 69418996 -70897769 + (CCCCCG)n Simple_repeat Simple_repeat 1 88 0 181 138 17 17 chr10 69419033 69419091 -70897674 + (TGG)n Simple_repeat Simple_repeat 2 59 0 304 109 0 0 chr10 69419565 69419611 -70897154 + AluSc SINE Alu 251 296 -3 2203 107 0 0 chr10 69419614 69419903 -70896862 + AluSg SINE Alu 1 289 -21 1113 132 0 12 chr10 69420056 69420223 -70896542 - AluSg/x SINE Alu -11 301 137 1830 144 3 7 chr10 69420223 69420507 -70896258 - AluSq SINE Alu -29 284 2 2028 135 7 3 chr10 69420515 69420804 -70895961 - AluSg SINE Alu -20 290 1 661 210 0 0 chr10 69420890 69421009 -70895756 + FLAM_C SINE Alu 1 119 -24 216 0 0 0 chr10 69421011 69421035 -70895730 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2105 97 7 31 chr10 69421035 69421323 -70895442 - AluSq SINE Alu -32 281 1 180 111 0 0 chr10 69421350 69421377 -70895388 + (CCA)n Simple_repeat Simple_repeat 3 29 0 1603 195 20 7 chr10 69422578 69422881 -70893884 - AluJo SINE Alu -5 307 1 2402 97 0 7 chr10 69422892 69423202 -70893563 - AluSc SINE Alu -1 308 1 754 156 16 8 chr10 69423296 69423424 -70893341 + FLAM_C SINE Alu 2 130 -13 2065 137 3 7 chr10 69423432 69423731 -70893034 + AluSx SINE Alu 1 298 -14 1979 116 13 60 chr10 69423734 69424052 -70892713 + AluSx SINE Alu 1 303 -9 1458 142 0 14 chr10 69424337 69424556 -70892209 + AluJb SINE Alu 73 288 -24 226 200 0 0 chr10 69424556 69424596 -70892169 + G-rich Low_complexity Low_complexity 1 40 0 267 54 0 0 chr10 69424620 69424657 -70892108 + (C)n Simple_repeat Simple_repeat 1 37 0 30 27 0 0 chr10 69425335 69425372 -70891393 + GC_rich Low_complexity Low_complexity 1 37 0 233 214 0 57 chr10 69426403 69426473 -70890292 + CT-rich Low_complexity Low_complexity 2 67 0 232 292 11 11 chr10 69427711 69427800 -70888965 + CT-rich Low_complexity Low_complexity 2 90 0 2266 116 0 0 chr10 69428417 69428711 -70888054 - AluSx SINE Alu -13 299 6 778 330 14 0 chr10 69428886 69429183 -70887582 - AluSx SINE Alu -1 301 1 1205 126 22 0 chr10 69429908 69430091 -70886674 - AluSq SINE Alu -126 187 1 1830 144 0 4 chr10 69430140 69430403 -70886362 + AluSx SINE Alu 50 311 -1 1188 146 44 5 chr10 69430949 69431155 -70885610 - MER20 DNA MER1_type -4 215 2 2205 92 7 3 chr10 69431279 69431563 -70885202 - AluSc SINE Alu -20 289 5 753 203 8 0 chr10 69431567 69431695 -70885070 - FLAM_A SINE Alu -1 132 4 2270 91 3 3 chr10 69432405 69432713 -70884052 + AluSp SINE Alu 1 308 0 2377 105 0 0 chr10 69433039 69433344 -70883421 + AluSc SINE Alu 1 305 -4 1263 215 0 84 chr10 69433405 69433716 -70883049 + AluJo SINE Alu 9 293 -19 2301 101 0 7 chr10 69433763 69434060 -70882705 - AluSg SINE Alu -15 295 1 1695 163 45 28 chr10 69434309 69434597 -70882168 - AluJb SINE Alu -19 293 1 2337 96 10 6 chr10 69434630 69434942 -70881823 - AluSp SINE Alu 0 313 1 1707 187 25 86 chr10 69435000 69435217 -70881548 + LTR54 LTR ERV1 18 247 -263 261 109 0 0 chr10 69435217 69435263 -70881502 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 1950 97 32 18 chr10 69435265 69435543 -70881222 - AluSx SINE Alu -30 282 1 1707 187 25 86 chr10 69435543 69435846 -70880919 + LTR54 LTR ERV1 248 509 -1 326 109 0 0 chr10 69435846 69435901 -70880864 + L1MD2 LINE L1 6305 6359 0 744 95 0 0 chr10 69435911 69436006 -70880759 + AluSq SINE Alu 2 96 -217 933 70 0 0 chr10 69436008 69436122 -70880643 + AluSp/q SINE Alu 186 299 -14 21 0 0 0 chr10 69437267 69437288 -70879477 + AT_rich Low_complexity Low_complexity 1 21 0 886 176 47 10 chr10 69437331 69437524 -70879241 - MER2 DNA MER2_type 0 345 146 2153 111 21 0 chr10 69437606 69437895 -70878870 + AluSc SINE Alu 1 295 -14 286 88 0 53 chr10 69437895 69437952 -70878813 + (GGGGA)n Simple_repeat Simple_repeat 3 56 0 213 39 0 0 chr10 69437970 69437996 -70878769 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 207 329 0 12 chr10 69438180 69438265 -70878500 + G-rich Low_complexity Low_complexity 4 87 0 * 294 215 25 63 chr10 69438208 69438366 -70878399 + (AGGTG)n Simple_repeat Simple_repeat 4 155 0 942 124 84 22 chr10 69438787 69438965 -70877800 + AluSg/x SINE Alu 107 295 -17 591 174 27 87 chr10 69438965 69439114 -70877651 - AluJo SINE Alu -100 212 73 2583 55 0 10 chr10 69439337 69439649 -70877116 - AluY SINE Alu -2 309 1 1067 82 30 0 chr10 69439651 69439786 -70876979 - AluSg1 SINE Alu -169 140 2 288 274 14 0 chr10 69440308 69440381 -70876384 + L2 LINE L2 2200 2273 -1041 232 36 0 0 chr10 69440382 69440410 -70876355 - L1MC4 LINE L1 -1051 6991 6964 248 179 0 4 chr10 69440412 69440470 -70876295 - L1MC/D LINE L1 -407 5755 5709 237 220 209 0 chr10 69440507 69440598 -70876167 + L2 LINE L2 2926 3035 -278 915 185 12 12 chr10 69440620 69440782 -70875983 + AluSg/x SINE Alu 130 291 -21 1923 127 4 0 chr10 69440798 69441065 -70875700 + AluSq SINE Alu 34 301 -12 239 350 120 15 chr10 69441065 69441339 -70875426 - L2 LINE L2 -1110 2204 1902 4557 70 14 7 chr10 69441483 69441552 -70875213 + LTR10C LTR ERV1 1 68 -523 2443 76 0 3 chr10 69441552 69441854 -70874911 - AluY SINE Alu -10 301 1 4557 70 14 7 chr10 69441854 69442371 -70874394 + LTR10C LTR ERV1 68 591 0 414 129 35 0 chr10 69442477 69442562 -70874203 + (TA)n Simple_repeat Simple_repeat 1 88 0 257 239 45 0 chr10 69442562 69442650 -70874115 + L1MC4 LINE L1 6612 6703 -1339 2200 97 3 32 chr10 69442651 69442961 -70873804 - AluSq SINE Alu -12 301 1 243 0 0 0 chr10 69442973 69443000 -70873765 + (T)n Simple_repeat Simple_repeat 1 27 0 2502 47 0 7 chr10 69443168 69443468 -70873297 + AluY SINE Alu 1 298 -13 228 224 0 0 chr10 69443468 69443526 -70873239 - Tigger7 DNA MER2_type -603 102 45 415 246 38 16 chr10 69443538 69443696 -70873069 + MER21B LTR ERV1 1 201 -404 1596 230 108 11 chr10 69443815 69444280 -70872485 + MER21B LTR ERV1 342 851 -12 2391 106 3 3 chr10 69444377 69444688 -70872077 - AluSq SINE Alu -2 311 1 835 160 21 85 chr10 69444690 69444878 -70871887 - FRAM SINE Alu 0 40 1 1747 126 0 0 chr10 69445112 69445358 -70871407 - AluSg SINE Alu -3 307 62 1467 125 129 16 chr10 69445521 69445777 -70870988 - AluSg SINE Alu -25 285 1 2233 107 0 0 chr10 69445897 69446211 -70870554 - AluSg1 SINE Alu 0 314 1 1332 149 153 15 chr10 69446211 69446472 -70870293 - AluSg1 SINE Alu -12 297 1 24 0 0 0 chr10 69446543 69446567 -70870198 + AT_rich Low_complexity Low_complexity 1 24 0 1012 196 22 0 chr10 69446595 69446779 -70869986 - AluJ SINE Alu -5 307 120 529 183 0 39 chr10 69446801 69446905 -70869860 - AluJ SINE Alu -169 143 44 2177 126 3 0 chr10 69446985 69447287 -70869478 + AluSx SINE Alu 1 303 -9 2381 102 0 6 chr10 69447287 69447602 -70869163 + AluSq SINE Alu 1 313 0 715 183 0 24 chr10 69447695 69447821 -70868944 + AluJo/FLAM SINE Alu 5 127 -185 2165 121 3 16 chr10 69447821 69448126 -70868639 + AluSx SINE Alu 1 301 -11 2227 124 7 0 chr10 69448194 69448501 -70868264 + AluSx SINE Alu 1 309 -3 769 275 42 21 chr10 69448501 69448737 -70868028 + MIR SINE MIR 22 262 0 944 189 0 12 chr10 69449502 69449671 -70867094 - AluJo SINE Alu -11 301 135 1903 146 0 10 chr10 69450300 69450588 -70866177 - AluSg SINE Alu -1 309 25 690 196 30 15 chr10 69450588 69450721 -70866044 - AluJo SINE Alu -162 150 16 256 114 0 0 chr10 69451015 69451059 -70865706 - AluSx SINE Alu 0 302 259 1560 205 3 19 chr10 69451104 69451411 -70865354 + AluJo SINE Alu 1 302 -10 2012 119 0 0 chr10 69453024 69453292 -70863473 - AluSx SINE Alu -33 279 12 192 77 0 0 chr10 69453335 69453361 -70863404 + (TCCC)n Simple_repeat Simple_repeat 2 27 0 2052 149 0 0 chr10 69454648 69454937 -70861828 + AluSx SINE Alu 1 289 -23 766 169 0 22 chr10 69454937 69455068 -70861697 - AluJo/FLAM SINE Alu -174 128 1 1918 152 3 0 chr10 69455533 69455816 -70860949 + AluSx SINE Alu 9 292 -20 2387 113 0 0 chr10 69455978 69456288 -70860477 - AluSg SINE Alu 0 310 1 2081 125 31 0 chr10 69456288 69456577 -70860188 - AluSg SINE Alu -12 298 1 813 143 15 8 chr10 69456577 69456710 -70860055 - AluSq/x SINE Alu -177 136 3 283 371 0 0 chr10 69456727 69456824 -70859941 + L2 LINE L2 2981 3077 -195 1785 117 3 139 chr10 69456940 69457292 -70859473 - AluSx SINE Alu -4 308 5 1609 197 16 7 chr10 69457363 69457667 -70859098 - AluJo SINE Alu -5 307 1 2410 97 0 6 chr10 69457678 69457989 -70858776 - AluSc SINE Alu 0 309 1 1185 152 5 16 chr10 69458010 69458201 -70858564 - AluSx SINE Alu -113 199 11 2042 135 0 7 chr10 69458253 69458550 -70858215 + AluSx SINE Alu 1 295 -17 1662 149 7 18 chr10 69458635 69458917 -70857848 + AluSx SINE Alu 1 279 -33 968 234 56 25 chr10 69458953 69459031 -70857734 - L1ME1 LINE L1 -56 6110 6036 1845 146 20 14 chr10 69459031 69459189 -70857576 - AluSx SINE Alu -15 297 135 2390 102 0 0 chr10 69459189 69459493 -70857272 - AluY SINE Alu -7 304 1 1845 146 20 14 chr10 69459493 69459629 -70857136 - AluSx SINE Alu -177 135 1 968 234 56 25 chr10 69459629 69459836 -70856929 - L1ME1 LINE L1 -130 6036 5816 2023 136 3 10 chr10 69459837 69460131 -70856634 - AluSx SINE Alu -3 309 18 1881 111 0 19 chr10 69460131 69460437 -70856328 + AluYa5 SINE Alu 1 301 -10 410 141 14 0 chr10 69460476 69460547 -70856218 - AluS SINE Alu -13 299 228 2320 110 3 0 chr10 69460708 69461009 -70855756 - AluSp SINE Alu -11 302 1 2375 100 3 3 chr10 69461021 69461332 -70855433 - AluSq SINE Alu -2 311 1 2027 145 10 3 chr10 69461391 69461701 -70855064 - AluSx SINE Alu 0 312 1 2050 139 0 3 chr10 69461702 69462003 -70854762 - AluSx SINE Alu -12 300 1 879 346 39 39 chr10 69462003 69462755 -70854010 + HERVL18 LTR ERVL 2085 2836 -2507 708 255 0 0 chr10 69462801 69462988 -70853777 + FRAM SINE Alu 1 187 0 2356 94 3 0 chr10 69463139 69463436 -70853329 - AluSp SINE Alu -15 298 1 1742 125 29 64 chr10 69463748 69463886 -70852879 + AluJo SINE Alu 2 143 -169 2213 110 0 19 chr10 69463886 69464195 -70852570 + AluSg SINE Alu 1 303 -7 1742 125 29 64 chr10 69464195 69464367 -70852398 + AluJo SINE Alu 143 301 -11 452 340 38 32 chr10 69464785 69465100 -70851665 + HERVL18 LTR ERVL 3752 4190 -1275 2125 137 0 3 chr10 69465207 69465507 -70851258 + AluSx SINE Alu 1 299 -13 1539 161 3 75 chr10 69465517 69465839 -70850926 + AluJo SINE Alu 1 299 -13 2189 113 0 3 chr10 69465938 69466231 -70850534 + AluSc SINE Alu 1 292 -17 1937 119 7 11 chr10 69466574 69466859 -70849906 + AluSx SINE Alu 12 295 -17 636 223 91 66 chr10 69466859 69467056 -70849709 - AluJo SINE Alu -100 212 11 420 20 0 0 chr10 69467068 69467117 -70849648 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2630 48 0 10 chr10 69467257 69467571 -70849194 - AluY SINE Alu 0 311 1 1067 82 30 0 chr10 69467573 69467708 -70849057 - AluSg1 SINE Alu -169 140 2 288 274 14 0 chr10 69468230 69468303 -70848462 + L2 LINE L2 2200 2273 -1041 232 36 0 0 chr10 69468304 69468332 -70848433 - L1MC4 LINE L1 -1051 6991 6964 248 179 0 4 chr10 69468334 69468392 -70848373 - L1MC/D LINE L1 -407 5755 5709 237 220 209 0 chr10 69468429 69468520 -70848245 + L2 LINE L2 2926 3035 -278 915 185 12 12 chr10 69468542 69468704 -70848061 + AluSg/x SINE Alu 128 289 -21 1898 121 11 11 chr10 69468720 69468992 -70847773 + AluSx SINE Alu 34 305 -7 189 0 0 0 chr10 69468992 69469013 -70847752 + (CA)n Simple_repeat Simple_repeat 2 22 0 1544 180 29 4 chr10 69469069 69469364 -70847401 - AluJb SINE Alu 0 306 5 2113 100 7 24 chr10 69469390 69469679 -70847086 - AluSc SINE Alu -25 284 1 400 261 31 102 chr10 69469699 69469925 -70846840 + L2 LINE L2 3080 3289 -24 621 197 29 58 chr10 69470086 69470223 -70846542 - FLAM_A SINE Alu -6 136 4 828 211 0 0 chr10 69470238 69470380 -70846385 - FRAM SINE Alu -22 154 13 269 57 0 0 chr10 69470529 69470564 -70846201 - tRNA-Gly-GGA tRNA tRNA -39 36 2 2017 110 35 0 chr10 69470585 69470707 -70846058 + AluSq SINE Alu 1 117 -196 207 0 0 0 chr10 69470707 69470730 -70846035 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2017 110 35 0 chr10 69470730 69470889 -70845876 + AluSq SINE Alu 117 292 -21 241 236 0 42 chr10 69471756 69471828 -70844937 + GA-rich Low_complexity Low_complexity 2 70 0 23 54 0 0 chr10 69472178 69472215 -70844550 + GC_rich Low_complexity Low_complexity 1 37 0 233 214 0 57 chr10 69473599 69473669 -70843096 + CT-rich Low_complexity Low_complexity 2 67 0 232 292 11 11 chr10 69474904 69474993 -70841772 + CT-rich Low_complexity Low_complexity 2 90 0 2250 116 0 0 chr10 69475610 69475904 -70840861 - AluSx SINE Alu -13 299 6 2169 125 14 0 chr10 69476079 69476376 -70840389 - AluSx SINE Alu -11 301 1 1691 159 3 44 chr10 69476670 69476965 -70839800 + AluJo SINE Alu 16 298 -14 1486 184 53 14 chr10 69477124 69477407 -70839358 + AluJb SINE Alu 3 296 -16 198 0 0 0 chr10 69477407 69477429 -70839336 + (TA)n Simple_repeat Simple_repeat 2 23 0 519 286 64 26 chr10 69478807 69479041 -70837724 - MIR SINE MIR -13 249 7 192 250 179 0 chr10 69479137 69479221 -70837544 - MIR SINE MIR -117 145 47 1619 97 5 0 chr10 69479320 69479526 -70837239 - AluSp SINE Alu -106 207 1 24 32 0 0 chr10 69479529 69479560 -70837205 + AT_rich Low_complexity Low_complexity 1 31 0 559 206 0 66 chr10 69479568 69479704 -70837061 + AluSp/q SINE Alu 174 300 -13 1948 103 4 19 chr10 69479854 69480115 -70836650 - AluSp SINE Alu -56 257 1 256 91 0 0 chr10 69480117 69480150 -70836615 - Alu SINE Alu -267 33 1 2292 84 0 56 chr10 69480150 69480470 -70836295 - AluSq SINE Alu -11 302 1 1204 182 5 0 chr10 69480598 69480801 -70835964 + AluJb SINE Alu 100 303 -9 2654 58 0 6 chr10 69481104 69481417 -70835348 - AluY SINE Alu 0 311 1 673 222 76 6 chr10 69481565 69481736 -70835029 + AluJo SINE Alu 120 302 -10 1605 119 75 32 chr10 69481913 69482035 -70834730 - L1PA16 LINE L1 -9 6157 6042 2609 65 0 0 chr10 69482035 69482343 -70834422 - AluSx SINE Alu -4 308 1 1605 119 75 32 chr10 69482343 69482498 -70834267 - L1PA16 LINE L1 -124 6042 5868 2351 76 0 20 chr10 69482569 69482872 -70833893 - AluY SINE Alu -14 297 1 249 42 42 21 chr10 69482897 69482945 -70833820 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2219 99 3 0 chr10 69482947 69483229 -70833536 - AluSx SINE Alu -29 283 1 1615 127 147 0 chr10 69483232 69483504 -70833261 - AluSg SINE Alu 0 309 2 1167 68 0 0 chr10 69483504 69483637 -70833128 - AluSg SINE Alu -177 133 1 659 203 0 8 chr10 69483641 69483764 -70833001 - FLAM_C SINE Alu -11 122 1 1860 155 10 3 chr10 69483777 69484074 -70832691 + AluJb SINE Alu 1 299 -13 192 61 91 0 chr10 69486742 69486775 -70829990 + MIR SINE MIR 156 191 -71 2220 112 0 0 chr10 69487041 69487377 -70829388 + AluSq SINE Alu 1 336 0 1877 128 33 0 chr10 69487384 69487699 -70829066 + AluSq SINE Alu 1 324 0 2370 57 4 0 chr10 69487699 69488023 -70828742 + AluY SINE Alu 1 325 0 1865 151 24 0 chr10 69488033 69488324 -70828441 + AluSx SINE Alu 1 298 -14 1763 183 3 7 chr10 69488339 69488645 -70828120 + AluJo SINE Alu 1 305 -7 1970 138 0 43 chr10 69488680 69488868 -70827897 - AluSx SINE Alu 0 312 142 2410 60 10 7 chr10 69488868 69489167 -70827598 - AluY SINE Alu -11 300 1 1970 138 0 43 chr10 69489167 69489304 -70827461 - AluSx SINE Alu -170 142 1 1242 204 27 15 chr10 69489363 69489447 -70827318 + AluJo SINE Alu 34 116 -196 194 0 39 0 chr10 69489447 69489473 -70827292 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2050 122 3 7 chr10 69489483 69489787 -70826978 + AluSx SINE Alu 1 303 -9 1242 204 27 15 chr10 69489787 69489951 -70826814 + AluJo SINE Alu 124 296 -16 398 99 0 234 chr10 69490071 69490182 -70826583 + FLAM_C SINE Alu 21 105 -28 1082 97 0 7 chr10 69490201 69490378 -70826387 - AluSg/x SINE Alu 0 314 139 720 188 7 14 chr10 69490627 69490765 -70826000 - AluJo SINE Alu -174 138 2 952 107 0 14 chr10 69490982 69491122 -70825643 + AluSg/x SINE Alu 164 301 -11 1378 118 20 5 chr10 69491776 69491980 -70824785 - AluSp SINE Alu -106 207 1 2183 108 14 0 chr10 69493214 69493500 -70823265 + AluSc SINE Alu 1 290 -19 232 171 0 0 chr10 69493554 69493595 -70823170 + L2 LINE L2 3271 3311 -2 2384 76 7 13 chr10 69493621 69493925 -70822840 - AluSx SINE Alu -10 302 1 2172 128 0 0 chr10 69494010 69494315 -70822450 + AluSx SINE Alu 1 305 -7 2009 133 3 3 chr10 69494411 69494573 -70822192 - AluSx SINE Alu -19 293 129 2170 114 3 9 chr10 69494573 69494888 -70821877 - AluSp SINE Alu 0 313 1 2009 133 3 3 chr10 69494888 69495018 -70821747 - AluSx SINE Alu -182 130 1 2264 85 17 3 chr10 69495314 69495607 -70821158 + AluSc SINE Alu 1 297 -12 1472 165 16 90 chr10 69495607 69495764 -70821001 - AluJo SINE Alu -21 291 166 1974 146 0 3 chr10 69495764 69496065 -70820700 - AluSx SINE Alu -12 300 1 1472 165 16 90 chr10 69496065 69496220 -70820545 - AluJo SINE Alu -146 166 1 1910 112 67 0 chr10 69497463 69497748 -70819017 - AluSx SINE Alu -8 304 1 339 250 0 13 chr10 69497794 69497870 -70818895 - AluJ/FLAM SINE Alu -227 75 1 232 301 157 0 chr10 69497967 69498050 -70818715 - MIR SINE MIR -62 146 51 21 36 0 0 chr10 69498367 69498395 -70818370 + AT_rich Low_complexity Low_complexity 1 28 0 1797 153 20 3 chr10 69498427 69498727 -70818038 + AluJo SINE Alu 1 305 -7 344 219 24 6 chr10 69498804 69498921 -70817844 - L1ME LINE L1 -5949 121 2 865 103 0 0 chr10 69499074 69499191 -70817574 - AluJb SINE Alu -195 117 1 1925 165 3 7 chr10 69499250 69499559 -70817206 - AluSx SINE Alu -4 308 1 1809 154 3 62 chr10 69499695 69500019 -70816746 - AluJb SINE Alu -7 305 1 1119 157 174 25 chr10 69500159 69500395 -70816370 + AluJo SINE Alu 28 298 -14 2433 94 3 0 chr10 69500430 69500738 -70816027 - AluSp SINE Alu 0 313 5 2169 95 3 11 chr10 69501208 69501524 -70815241 + AluY SINE Alu 1 314 0 2277 108 19 0 chr10 69501621 69501928 -70814837 + AluSq SINE Alu 1 313 0 221 298 8 84 chr10 69502245 69502376 -70814389 + L2 LINE L2 2932 3052 -220 2235 100 17 10 chr10 69502543 69502842 -70813923 + AluSc SINE Alu 5 305 -4 972 152 30 12 chr10 69503025 69503190 -70813575 - AluSg/x SINE Alu -11 299 132 2211 105 0 7 chr10 69503190 69503496 -70813269 - AluSq SINE Alu -6 307 4 2390 103 0 0 chr10 69503501 69503811 -70812954 - AluSx SINE Alu -2 310 1 2229 116 0 6 chr10 69504287 69504598 -70812167 + AluSx SINE Alu 4 312 0 804 191 89 0 chr10 69504598 69504755 -70812010 + AluJo/FRAM SINE Alu 129 299 -13 23 33 0 0 chr10 69504790 69504820 -70811945 + AT_rich Low_complexity Low_complexity 1 30 0 1403 205 7 7 chr10 69505197 69505500 -70811265 - AluSg SINE Alu -5 305 3 405 0 0 0 chr10 69505565 69505610 -70811155 + (CA)n Simple_repeat Simple_repeat 2 46 0 246 62 0 0 chr10 69505609 69505641 -70811124 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 1092 118 12 6 chr10 69505610 69505795 -70810970 - AluSg/x SINE Alu -18 294 137 720 188 7 14 chr10 69506041 69506179 -70810586 - AluJo SINE Alu -174 138 2 204 40 0 0 chr10 69506576 69506601 -70810164 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2423 109 0 0 chr10 69506628 69506940 -70809825 - AluSx SINE Alu 0 312 1 3037 152 55 55 chr10 69507109 69507713 -70809052 + L1MB4 LINE L1 5524 6130 -50 2012 118 21 7 chr10 69507713 69508000 -70808765 + AluSq SINE Alu 1 291 -22 3037 152 55 55 chr10 69508000 69508052 -70808713 + L1MB4 LINE L1 6129 6180 0 2035 114 44 0 chr10 69508297 69508594 -70808171 - AluSx SINE Alu -2 310 1 204 273 30 15 chr10 69511726 69511792 -70804973 - L2 LINE L2 -1 3312 3246 1626 193 0 18 chr10 69513098 69513383 -70803382 + AluJo SINE Alu 3 282 -30 714 293 89 7 chr10 69513889 69514336 -70802429 - LTR33 LTR ERVL -2 519 17 545 188 20 0 chr10 69514397 69514498 -70802267 + L1MD3 LINE L1 7869 7971 -24 1621 110 9 4 chr10 69514800 69515028 -70801737 + AluSp SINE Alu 1 229 -84 21 53 0 35 chr10 69515098 69515133 -70801632 + AT_rich Low_complexity Low_complexity 1 35 -20 1947 152 3 7 chr10 69515133 69515423 -70801342 - AluSx SINE Alu -23 289 1 21 53 0 35 chr10 69515423 69515444 -70801321 + AT_rich Low_complexity Low_complexity 35 55 0 474 259 0 0 chr10 69515488 69515626 -70801139 - FLAM_A SINE Alu 0 145 8 2119 130 0 0 chr10 69515693 69515993 -70800772 + AluSx SINE Alu 1 300 -12 192 40 0 0 chr10 69516203 69516228 -70800537 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1481 184 68 3 chr10 69517030 69517323 -70799442 - AluSx SINE Alu 0 312 1 301 138 25 0 chr10 69517382 69517462 -70799303 + (TA)n Simple_repeat Simple_repeat 2 83 0 2246 103 3 3 chr10 69517545 69517836 -70798929 - AluSc SINE Alu -18 291 1 2245 98 0 3 chr10 69517848 69518143 -70798622 - AluSg SINE Alu -16 294 1 2085 132 0 3 chr10 69518148 69518444 -70798321 - AluSx SINE Alu -17 295 1 26 0 0 0 chr10 69518444 69518470 -70798295 + AT_rich Low_complexity Low_complexity 1 26 0 675 155 16 47 chr10 69518470 69518599 -70798166 - FLAM_C SINE Alu -8 125 1 1167 209 21 46 chr10 69518604 69518773 -70797992 - AluJo SINE Alu -4 308 147 2409 78 3 0 chr10 69518773 69519069 -70797696 - AluSp SINE Alu -16 297 1 1167 209 21 46 chr10 69519069 69519182 -70797583 - AluJo SINE Alu -165 147 33 36 23 0 0 chr10 69519373 69519416 -70797349 + AT_rich Low_complexity Low_complexity 1 43 0 710 202 0 0 chr10 69519475 69519594 -70797171 + AluJb SINE Alu 2 120 -192 2282 106 0 0 chr10 69519610 69519911 -70796854 + AluY SINE Alu 1 301 -10 2012 123 13 29 chr10 69519911 69520227 -70796538 + AluSx SINE Alu 1 311 -1 1585 179 70 0 chr10 69520263 69520548 -70796217 - AluJb SINE Alu -7 305 1 2192 107 7 0 chr10 69520621 69520911 -70795854 + AluSg SINE Alu 1 292 -18 576 260 16 0 chr10 69520939 69521062 -70795703 + FAM SINE Alu 1 125 -60 892 249 0 0 chr10 69521062 69521239 -70795526 + AluJo SINE Alu 85 261 -51 859 100 0 17 chr10 69521259 69521447 -70795318 - AluSg/x SINE Alu 0 349 164 392 179 0 12 chr10 69521460 69521544 -70795221 + GA-rich Low_complexity Low_complexity 1 83 0 2207 116 7 0 chr10 69521699 69522000 -70794765 - AluSx SINE Alu -9 303 1 474 217 0 43 chr10 69522044 69522159 -70794606 + FLAM_C SINE Alu 23 132 -11 1946 161 3 0 chr10 69522224 69522528 -70794237 - AluJb SINE Alu -7 305 1 2254 90 3 10 chr10 69523265 69523566 -70793199 + AluSx SINE Alu 1 299 -13 829 150 0 43 chr10 69524133 69524273 -70792492 - AluSg/x SINE Alu -24 286 153 1415 187 0 0 chr10 69524274 69524504 -70792261 - AluJb SINE Alu -82 230 1 22 0 0 0 chr10 69524530 69524552 -70792213 + AT_rich Low_complexity Low_complexity 1 22 0 1875 122 28 11 chr10 69524555 69524841 -70791924 - AluSg SINE Alu -19 291 1 326 211 154 89 chr10 69524845 69524953 -70791812 - L1MC4 LINE L1 -44 7998 7898 1979 111 3 19 chr10 69524953 69525260 -70791505 - AluSq SINE Alu -9 304 3 326 211 154 89 chr10 69525260 69525272 -70791493 - L1MC4 LINE L1 -144 7898 7888 2031 82 62 21 chr10 69525272 69525563 -70791202 - AluSp SINE Alu -10 303 1 326 211 154 89 chr10 69525563 69525687 -70791078 - L1MC4 LINE L1 -154 7888 7737 230 67 0 67 chr10 69525697 69525742 -70791023 - L1MC4 LINE L1 -264 7778 7737 1159 183 234 41 chr10 69525743 69526154 -70790611 - L1MC4 LINE L1 -263 7779 7290 1128 203 7 75 chr10 69526158 69526328 -70790437 - AluJo SINE Alu -16 296 116 2334 64 0 0 chr10 69526328 69526623 -70790142 - AluY SINE Alu -16 295 1 2437 52 16 10 chr10 69526631 69526940 -70789825 - AluY SINE Alu 0 311 1 1128 203 7 75 chr10 69526940 69527055 -70789710 - AluJo SINE Alu -203 109 22 235 176 189 40 chr10 69527076 69527150 -70789615 - L1MC4a LINE L1 -599 7209 7125 2101 88 3 3 chr10 69527151 69527462 -70789303 - AluSp SINE Alu 0 311 1 752 196 75 35 chr10 69527526 69527699 -70789066 - AluJb SINE Alu -3 309 130 764 224 6 22 chr10 69528438 69528617 -70788148 + FRAM SINE Alu 1 176 0 1261 176 90 36 chr10 69528853 69529132 -70787633 - AluJb SINE Alu -8 294 1 674 185 130 20 chr10 69529175 69529375 -70787390 - L1MA7 LINE L1 0 6291 6070 243 300 0 0 chr10 69529389 69529459 -70787306 - L1ME2 LINE L1 -10 6154 6085 3204 196 80 47 chr10 69529467 69529527 -70787238 - L1MB8 LINE L1 -9 6169 6112 1858 116 41 7 chr10 69529527 69529821 -70786944 + AluSx SINE Alu 1 304 -8 3204 196 80 47 chr10 69529821 69530719 -70786046 - L1MB8 LINE L1 -66 6112 5180 502 137 14 0 chr10 69530771 69530844 -70785921 + AluJ/FLAM SINE Alu 2 75 -237 810 123 0 0 chr10 69530860 69530982 -70785783 - AluSp/q SINE Alu -13 300 179 1585 127 13 0 chr10 69530982 69531219 -70785546 + AluSx SINE Alu 64 303 -9 1775 161 66 216 chr10 69531542 69531782 -70784983 - L1MC4a LINE L1 0 7808 7534 747 108 0 0 chr10 69531782 69531893 -70784872 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 1767 125 10 24 chr10 69531894 69532183 -70784582 - AluSx SINE Alu -27 285 1 1775 161 66 216 chr10 69532183 69532372 -70784393 - L1MC4a LINE L1 -274 7534 7318 692 210 0 0 chr10 69532372 69532496 -70784269 - FLAM_C SINE Alu -19 124 1 1775 161 66 216 chr10 69532496 69532975 -70783790 - L1MC4a LINE L1 -490 7318 6929 355 333 59 7 chr10 69533049 69533184 -70783581 + L3 LINE CR1 1425 1566 -11 1270 118 0 0 chr10 69533702 69533888 -70782877 - AluSg/x SINE Alu 0 310 125 2319 87 3 0 chr10 69533895 69534206 -70782559 - AluSp SINE Alu -1 312 1 2286 49 0 11 chr10 69534210 69534651 -70782114 - AluY SINE Alu 0 438 1 1588 168 13 22 chr10 69535422 69535737 -70781028 + AluJo SINE Alu 1 312 0 273 195 0 91 chr10 69535848 69535952 -70780813 - AluJ/FRAM SINE Alu 0 302 233 180 111 0 0 chr10 69535970 69535997 -70780768 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 756 151 0 0 chr10 69535998 69536117 -70780648 - FLAM_C SINE Alu -23 120 2 1842 137 23 7 chr10 69536123 69536466 -70780299 - AluSx SINE Alu 0 348 1 1979 107 3 42 chr10 69536612 69536743 -70780022 + AluSx SINE Alu 5 140 -172 2157 109 6 6 chr10 69536743 69537055 -70779710 + AluSx SINE Alu 1 312 0 1979 107 3 42 chr10 69537055 69537233 -70779532 + AluSx SINE Alu 140 302 -10 1935 110 7 32 chr10 69537263 69537573 -70779192 + AluSx SINE Alu 1 302 -10 213 39 0 0 chr10 69537600 69537626 -70779139 + (TTA)n Simple_repeat Simple_repeat 2 27 0 418 136 0 0 chr10 69537633 69537692 -70779073 - AluS SINE Alu -30 281 223 1180 100 6 6 chr10 69537694 69537864 -70778901 - AluSq SINE Alu -143 170 1 528 255 35 0 chr10 69538539 69538684 -70778081 + Charlie5 DNA MER1_type 50 199 -2413 1923 152 0 0 chr10 69538701 69539011 -70777754 + AluSx SINE Alu 2 311 -1 22 43 0 21 chr10 69539130 69539151 -70777614 + AT_rich Low_complexity Low_complexity 1 21 -25 2005 113 3 17 chr10 69539151 69539453 -70777312 - AluSc SINE Alu -11 298 1 22 43 0 21 chr10 69539453 69539478 -70777287 + AT_rich Low_complexity Low_complexity 21 46 0 460 278 251 32 chr10 69539870 69539926 -70776839 - L2 LINE L2 -923 2391 2349 1837 137 3 10 chr10 69539926 69540232 -70776533 - AluSq SINE Alu -9 304 1 460 278 251 32 chr10 69540232 69540511 -70776254 - L2 LINE L2 -965 2349 2133 1594 186 7 7 chr10 69540511 69540818 -70775947 + AluJo SINE Alu 1 307 -5 460 278 251 32 chr10 69540818 69541018 -70775747 - L2 LINE L2 -1181 2133 1737 201 121 0 0 chr10 69541034 69541067 -70775698 + (T)n Simple_repeat Simple_repeat 1 33 0 709 112 78 9 chr10 69541067 69541183 -70775582 - AluY SINE Alu -179 132 9 2213 68 10 3 chr10 69541660 69541953 -70774812 + AluY SINE Alu 1 295 -16 204 97 0 0 chr10 69542453 69542484 -70774281 + (A)n Simple_repeat Simple_repeat 1 31 0 1725 122 0 0 chr10 69542572 69542827 -70773938 + AluSx SINE Alu 54 308 -4 22 35 0 0 chr10 69542941 69542970 -70773795 + AT_rich Low_complexity Low_complexity 1 29 0 953 200 0 5 chr10 69542986 69543176 -70773589 - AluJb SINE Alu 0 312 124 332 70 0 0 chr10 69543176 69543219 -70773546 + MADE1 DNA Mariner 3 45 -35 681 133 62 78 chr10 69543219 69543347 -70773418 - AluSq/x SINE Alu -185 127 2 1342 158 0 18 chr10 69543570 69543798 -70772967 - AluJb SINE Alu -80 232 9 1807 102 15 98 chr10 69544374 69544709 -70772056 - AluSx SINE Alu -4 308 2 29 0 0 0 chr10 69544711 69544740 -70772025 + AT_rich Low_complexity Low_complexity 1 29 0 833 176 0 0 chr10 69544930 69545061 -70771704 + FLAM_C SINE Alu 2 132 -11 685 185 0 15 chr10 69545325 69545460 -70771305 + FLAM_C SINE Alu 1 133 0 853 181 229 15 chr10 69546077 69546282 -70770483 + AluJb SINE Alu 25 273 -39 309 26 0 0 chr10 69546599 69546637 -70770128 + (TG)n Simple_repeat Simple_repeat 1 38 0 1878 111 33 0 chr10 69546637 69546907 -70769858 - AluSx SINE Alu -33 279 1 659 129 0 35 chr10 69547133 69547249 -70769516 - AluSg/x SINE Alu -6 303 192 316 111 0 22 chr10 69547254 69547299 -70769466 + Alu SINE Alu 1 44 -257 550 133 12 0 chr10 69547299 69547382 -70769383 + AluSg/x SINE Alu 92 175 -137 1312 126 5 5 chr10 69547490 69547696 -70769069 + AluSg/x SINE Alu 92 297 -13 2075 108 3 0 chr10 69547724 69548011 -70768754 + AluSx SINE Alu 7 294 -18 241 231 0 106 chr10 69548051 69548155 -70768610 + MIR SINE MIR 119 211 -51 263 195 91 0 chr10 69548164 69548241 -70768524 + AluJ/FRAM SINE Alu 217 300 -2 344 176 0 14 chr10 69548275 69548349 -70768416 + G-rich Low_complexity Low_complexity 5 77 0 667 207 9 0 chr10 69548389 69548505 -70768260 + FLAM_C SINE Alu 5 121 -12 396 287 98 86 chr10 69548516 69548663 -70768102 + L1M4 LINE L1 4888 5032 -1114 1867 113 13 60 chr10 69548663 69548981 -70767784 + AluSx SINE Alu 1 303 -9 396 287 98 86 chr10 69548981 69549262 -70767503 + L1M4 LINE L1 5032 5321 -825 1340 142 0 14 chr10 69549266 69549484 -70767281 + AluJb SINE Alu 73 287 -25 195 42 0 0 chr10 69549484 69549508 -70767257 + (GGAGA)n Simple_repeat Simple_repeat 5 28 0 201 78 20 59 chr10 69549749 69549800 -70766965 + (GGAGA)n Simple_repeat Simple_repeat 2 50 0 558 143 0 48 chr10 69549931 69550036 -70766729 + HY3 scRNA scRNA 1 100 -1 23 33 0 0 chr10 69550348 69550378 -70766387 + AT_rich Low_complexity Low_complexity 1 30 0 2043 96 34 3 chr10 69550796 69551088 -70765677 - AluSx SINE Alu -11 301 1 25 0 0 0 chr10 69551088 69551113 -70765652 + AT_rich Low_complexity Low_complexity 1 25 0 1135 57 0 7 chr10 69551205 69551449 -70765316 - AluY SINE Alu -9 302 2 2040 123 3 0 chr10 69551450 69551752 -70765013 - AluSx SINE Alu -9 303 1 537 173 0 39 chr10 69551832 69551936 -70764829 + AluJ SINE Alu 44 143 -169 923 191 23 0 chr10 69551969 69552142 -70764623 + AluJ SINE Alu 131 307 -5 1244 153 149 11 chr10 69552265 69552526 -70764239 + AluSg1 SINE Alu 1 297 -12 2103 107 0 0 chr10 69552526 69552840 -70763925 + AluSg1 SINE Alu 1 314 0 1613 119 101 14 chr10 69552960 69553238 -70763527 + AluSg SINE Alu 1 302 -8 2306 73 13 0 chr10 69553843 69554146 -70762619 - AluSq SINE Alu -6 307 1 2365 75 7 0 chr10 69555308 69555615 -70761150 + AluSp SINE Alu 2 310 -3 1064 231 56 25 chr10 69555616 69555823 -70760942 + L1ME1 LINE L1 5816 6036 -130 1688 149 20 14 chr10 69555823 69555959 -70760806 + AluSx SINE Alu 1 135 -177 2246 102 0 0 chr10 69555959 69556264 -70760501 + AluY SINE Alu 1 305 -6 1688 149 20 14 chr10 69556264 69556422 -70760343 + AluSx SINE Alu 135 297 -15 1064 231 56 25 chr10 69556422 69556500 -70760265 + L1ME1 LINE L1 6036 6110 -56 1545 145 7 18 chr10 69556536 69556818 -70759947 - AluSx SINE Alu -33 279 1 1900 135 0 7 chr10 69556903 69557200 -70759565 - AluSx SINE Alu -17 295 1 1081 157 5 16 chr10 69557252 69557443 -70759322 + AluSx SINE Alu 11 199 -113 2156 55 0 24 chr10 69557464 69557753 -70759012 + AluY SINE Alu 11 292 -19 2021 111 16 10 chr10 69557754 69558061 -70758704 + AluSc SINE Alu 1 309 0 792 158 74 23 chr10 69558069 69558268 -70758497 - MER33 DNA MER1_type -95 268 1 1408 169 12 89 chr10 69558394 69558720 -70758045 + AluJo SINE Alu 1 301 -1 2172 101 3 0 chr10 69559182 69559479 -70757286 + AluSp SINE Alu 1 298 -15 676 255 0 0 chr10 69559630 69559817 -70756948 - FRAM SINE Alu 0 187 1 1041 331 47 47 chr10 69559863 69560615 -70756150 - LTR57-int LTR ERVL -2507 2836 2085 1902 139 0 3 chr10 69560615 69560916 -70755849 + AluSx SINE Alu 1 300 -12 1875 145 10 3 chr10 69560917 69561227 -70755538 + AluSx SINE Alu 1 312 0 2212 103 3 3 chr10 69561286 69561598 -70755167 + AluSq SINE Alu 1 312 -1 2146 100 3 10 chr10 69561610 69561919 -70754846 + AluSp SINE Alu 1 307 -6 2241 68 3 10 chr10 69562055 69562373 -70754392 + AluSp SINE Alu 1 313 0 4582 66 8 8 chr10 69562617 69563206 -70753559 - LTR10C LTR ERV1 -2 589 1 216 200 0 0 chr10 69563854 69563899 -70752866 - L2 LINE L2 0 3313 3269 1229 229 42 17 chr10 69564085 69564222 -70752543 + AluJo SINE Alu 1 133 -169 1942 127 0 10 chr10 69564222 69564522 -70752243 + AluSx SINE Alu 1 297 -15 1229 229 42 17 chr10 69564522 69564672 -70752093 + AluJo SINE Alu 133 295 -7 2034 125 16 0 chr10 69564674 69564978 -70751787 + AluSq SINE Alu 3 311 -2 21 0 0 0 chr10 69564978 69564999 -70751766 + AT_rich Low_complexity Low_complexity 1 21 0 1930 125 0 0 chr10 69565030 69565367 -70751398 + AluSg SINE Alu 1 337 0 2238 101 3 0 chr10 69565447 69565743 -70751022 + AluSp SINE Alu 1 297 -16 2283 88 0 0 chr10 69565743 69566037 -70750728 + AluSg1 SINE Alu 1 294 -15 2139 117 0 0 chr10 69566169 69566469 -70750296 + AluSq SINE Alu 1 300 -13 936 89 0 0 chr10 69566658 69566782 -70749983 + AluSc SINE Alu 166 289 -20 476 151 0 0 chr10 69566998 69567071 -70749694 - AluS SINE Alu -233 76 4 1861 156 0 0 chr10 69567102 69567403 -70749362 + AluSx SINE Alu 1 301 -11 2028 114 0 0 chr10 69567461 69567742 -70749023 + AluSx SINE Alu 1 281 -31 249 163 0 0 chr10 69567771 69567820 -70748945 + Alu SINE Alu 253 301 -2 209 135 19 0 chr10 69568749 69568801 -70747964 + A-rich Low_complexity Low_complexity 3 55 0 1342 258 75 12 chr10 69568983 69569398 -70747367 + LTR47B LTR ERVL 3 443 0 366 346 22 28 chr10 69569412 69569594 -70747171 + LTR47B-int LTR ERVL 15 195 -5148 2187 96 0 3 chr10 69569753 69570056 -70746709 + AluSq SINE Alu 2 303 -10 2180 104 0 0 chr10 69570732 69571029 -70745736 - AluSx SINE Alu -15 297 1 204 67 0 0 chr10 69571251 69571281 -70745484 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 1868 130 33 0 chr10 69571393 69571693 -70745072 + AluSg SINE Alu 1 310 0 1998 147 0 6 chr10 69571839 69572151 -70744614 + AluSx SINE Alu 1 310 -2 1560 96 5 5 chr10 69572152 69572370 -70744395 + AluSc SINE Alu 83 300 -9 1309 162 6 105 chr10 69572374 69572707 -70744058 + AluSx SINE Alu 3 302 0 1968 128 16 3 chr10 69572769 69573075 -70743690 - AluSx SINE Alu -1 311 2 858 189 0 0 chr10 69573084 69573248 -70743517 - AluJb SINE Alu -2 310 147 7782 57 5 2 chr10 69573312 69574275 -70742490 + LTR5 LTR ERVK 1 966 -3 207 167 0 0 chr10 69574979 69575015 -70741750 + (CCG)n Simple_repeat Simple_repeat 2 37 0 675 56 22 0 chr10 69575376 69575466 -70741299 + AluS SINE Alu 2 93 -220 476 293 10 20 chr10 69576174 69576372 -70740393 + AluSq SINE Alu 110 305 -8 38 66 0 0 chr10 69576374 69576435 -70740330 + AT_rich Low_complexity Low_complexity 1 61 0 488 220 10 0 chr10 69576486 69576586 -70740179 + Tigger7 DNA MER2_type 4 104 -601 1093 89 0 27 chr10 69576589 69576723 -70740042 + AluSq/x SINE Alu 3 134 -178 2287 122 0 0 chr10 69576723 69577034 -70739731 + AluSp SINE Alu 1 311 -2 1093 89 0 27 chr10 69577034 69577045 -70739720 + AluSq/x SINE Alu 134 144 -168 2213 100 3 3 chr10 69577048 69577337 -70739428 + AluSc SINE Alu 1 289 -20 267 181 20 3 chr10 69577390 69577449 -70739316 + L1MC/D LINE L1 5541 5599 -734 1725 160 38 0 chr10 69577450 69577738 -70739027 + AluSx SINE Alu 1 299 -13 2612 40 0 7 chr10 69577776 69578078 -70738687 - AluYa5 SINE Alu -11 300 1 1082 96 0 0 chr10 69578079 69578215 -70738550 - AluSq/x SINE Alu -176 136 1 1242 204 27 15 chr10 69578274 69578358 -70738407 + AluJo SINE Alu 34 116 -196 194 0 39 0 chr10 69578358 69578384 -70738381 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2037 125 3 7 chr10 69578394 69578698 -70738067 + AluSx SINE Alu 1 303 -9 1242 204 27 15 chr10 69578698 69578862 -70737903 + AluJo SINE Alu 124 296 -16 398 99 0 234 chr10 69578982 69579093 -70737672 + AluJ SINE Alu 21 105 -197 2056 87 4 4 chr10 69579112 69579411 -70737354 - AluSx SINE Alu 0 316 18 21 36 0 0 chr10 69579426 69579454 -70737311 + AT_rich Low_complexity Low_complexity 1 28 0 242 189 0 0 chr10 69579676 69579713 -70737052 - AluSx SINE Alu -263 37 1 1082 171 6 0 chr10 69579719 69579894 -70736871 + AluJ SINE Alu 115 290 -22 1572 120 0 0 chr10 69580796 69581012 -70735753 - AluSq SINE Alu -11 302 87 707 159 0 40 chr10 69581082 69581208 -70735557 + FLAM_C SINE Alu 2 122 -21 222 62 0 0 chr10 69581228 69581260 -70735505 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2883 3 0 7 chr10 69581297 69581606 -70735159 + AluYa5 SINE Alu 1 307 -4 2171 122 0 3 chr10 69581697 69582001 -70734764 + AluSq SINE Alu 1 303 -10 538 171 34 26 chr10 69582005 69582122 -70734643 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr10 69582122 69582147 -70734618 + AT_rich Low_complexity Low_complexity 1 25 0 1366 169 9 4 chr10 69582147 69582378 -70734387 + AluSg/x SINE Alu 81 312 0 1909 137 35 0 chr10 69582551 69582836 -70733929 + AluSx SINE Alu 3 297 -15 1786 154 21 14 chr10 69582856 69583142 -70733623 + AluSx SINE Alu 1 288 -24 2166 108 0 3 chr10 69583156 69583443 -70733322 + AluSg SINE Alu 1 286 -24 587 256 33 22 chr10 69583463 69583643 -70733122 - L1ME LINE L1 -425 5696 5515 1254 128 11 0 chr10 69583686 69583865 -70732900 - AluSq SINE Alu -20 293 113 219 125 0 0 chr10 69584070 69584110 -70732655 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 2024 111 68 0 chr10 69584228 69584508 -70732257 + AluSx SINE Alu 1 299 -13 347 215 11 32 chr10 69584508 69584601 -70732164 + L1MEc LINE L1 1854 1944 -4452 21 0 0 0 chr10 69584680 69584701 -70732064 + AT_rich Low_complexity Low_complexity 1 21 0 2235 97 0 13 chr10 69584709 69585009 -70731756 + AluSp SINE Alu 1 296 -17 2031 121 10 7 chr10 69585333 69585631 -70731134 + AluSq SINE Alu 1 299 -14 23 0 0 0 chr10 69585680 69585703 -70731062 + AT_rich Low_complexity Low_complexity 1 23 0 1657 157 50 7 chr10 69585712 69585992 -70730773 + AluJo SINE Alu 3 294 -18 381 158 0 0 chr10 69585994 69586095 -70730670 + (TA)n Simple_repeat Simple_repeat 2 102 0 2081 107 50 0 chr10 69586111 69586391 -70730374 + AluSg SINE Alu 1 294 -16 2172 104 0 39 chr10 69586550 69586857 -70729908 + AluSq SINE Alu 1 295 -18 2100 124 7 0 chr10 69586859 69587157 -70729608 + AluY SINE Alu 1 300 -11 180 71 0 0 chr10 69587245 69587257 -70729508 + (TTAAA)n Simple_repeat Simple_repeat 3 14 -16 2046 111 7 14 chr10 69587257 69587554 -70729211 + AluSq SINE Alu 1 295 -18 180 71 0 0 chr10 69587554 69587569 -70729196 + (TTAAA)n Simple_repeat Simple_repeat 13 30 0 919 159 7 13 chr10 69588000 69588151 -70728614 - FRAM SINE Alu -19 157 8 1560 129 0 0 chr10 69588161 69588371 -70728394 - AluSg/x SINE Alu -16 294 85 707 159 0 40 chr10 69588441 69588567 -70728198 + FLAM_C SINE Alu 2 122 -21 222 62 0 0 chr10 69588587 69588619 -70728146 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2200 115 0 3 chr10 69588734 69589038 -70727727 + AluSq SINE Alu 1 303 -10 538 171 34 26 chr10 69589042 69589159 -70727606 + FLAM_C SINE Alu 1 118 -15 23 0 0 0 chr10 69589159 69589182 -70727583 + AT_rich Low_complexity Low_complexity 1 23 0 1386 164 9 4 chr10 69589182 69589413 -70727352 + AluSg/x SINE Alu 79 310 0 1893 140 35 0 chr10 69589586 69589871 -70726894 + AluSx SINE Alu 3 297 -15 1742 161 21 14 chr10 69589890 69590176 -70726589 + AluSx SINE Alu 1 288 -24 2166 108 0 3 chr10 69590190 69590477 -70726288 + AluSg SINE Alu 1 286 -24 587 256 33 22 chr10 69590497 69590677 -70726088 - L1ME LINE L1 -425 5696 5515 1681 122 4 0 chr10 69590720 69590949 -70725816 - AluSq SINE Alu -20 293 64 1635 106 18 0 chr10 69591050 69591277 -70725488 + AluSg SINE Alu 60 290 -20 1631 167 33 33 chr10 69591288 69591419 -70725346 + AluJo SINE Alu 1 131 -181 2353 105 0 10 chr10 69591419 69591732 -70725033 + AluSq SINE Alu 1 310 -3 1631 167 33 33 chr10 69591732 69591900 -70724865 + AluJo SINE Alu 130 300 -12 2130 133 3 0 chr10 69591914 69592214 -70724551 + AluSq SINE Alu 1 301 -12 258 268 98 12 chr10 69592214 69592296 -70724469 - L2 LINE L2 -1110 2204 2116 4594 70 14 7 chr10 69592631 69592700 -70724065 + LTR10C LTR ERV1 1 68 -523 2522 70 0 0 chr10 69592700 69593001 -70723764 - AluY SINE Alu -10 301 1 4594 70 14 7 chr10 69593001 69593518 -70723247 + LTR10C LTR ERV1 68 591 0 776 146 16 20 chr10 69593625 69593873 -70722892 + (TA)n Simple_repeat Simple_repeat 1 247 0 249 226 0 32 chr10 69593881 69593974 -70722791 - L1MC4 LINE L1 -1339 6703 6614 * 300 272 19 0 chr10 69593894 69593997 -70722768 + L1MC4 LINE L1 6612 6716 -1326 1967 110 3 34 chr10 69594008 69594300 -70722465 - AluSq SINE Alu -30 283 1 2607 52 0 0 chr10 69594498 69594808 -70721957 + AluY SINE Alu 1 310 -1 2092 102 3 13 chr10 69594844 69595147 -70721618 + AluSg SINE Alu 1 300 -10 645 176 16 8 chr10 69595384 69595509 -70721256 + FLAM_C SINE Alu 5 130 -13 2107 133 3 3 chr10 69595517 69595817 -70720948 + AluSx SINE Alu 1 300 -12 2203 107 0 0 chr10 69595820 69596109 -70720656 + AluSg SINE Alu 1 289 -21 1113 132 0 12 chr10 69596262 69596429 -70720336 - AluSg/x SINE Alu -11 301 137 1824 144 3 11 chr10 69596429 69596714 -70720051 - AluSq SINE Alu -29 284 2 2028 135 7 3 chr10 69596722 69597011 -70719754 - AluSg SINE Alu -20 290 1 661 210 0 0 chr10 69597097 69597216 -70719549 + FLAM_C SINE Alu 1 119 -24 216 0 0 0 chr10 69597218 69597242 -70719523 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2198 103 0 3 chr10 69597242 69597524 -70719241 - AluSq SINE Alu -32 281 1 1958 138 3 17 chr10 69597530 69597827 -70718938 - AluSg SINE Alu -14 296 4 1976 156 0 0 chr10 69597858 69598159 -70718606 + AluSx SINE Alu 1 301 -11 2152 114 0 0 chr10 69598217 69598498 -70718267 + AluSx SINE Alu 1 281 -31 252 163 0 0 chr10 69598527 69598576 -70718189 + AluSp/q SINE Alu 253 301 -2 196 100 20 40 chr10 69599497 69599547 -70717218 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 1361 261 75 10 chr10 69599734 69600148 -70716617 + LTR47B LTR ERVL 3 443 0 373 348 11 27 chr10 69600162 69600346 -70716419 + LTR47B-int LTR ERVL 15 195 -5148 2292 99 0 3 chr10 69600505 69600808 -70715957 + AluSq SINE Alu 2 303 -10 2286 108 0 0 chr10 69601485 69601782 -70714983 - AluSx SINE Alu -15 297 1 204 67 0 0 chr10 69602004 69602034 -70714731 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 1965 133 33 0 chr10 69602146 69602446 -70714319 + AluSg SINE Alu 1 310 0 2047 153 0 7 chr10 69602592 69602899 -70713866 + AluSx SINE Alu 1 305 -7 1689 106 0 0 chr10 69602899 69603117 -70713648 + AluSc SINE Alu 83 300 -9 22 35 0 0 chr10 69603178 69603207 -70713558 + AT_rich Low_complexity Low_complexity 1 29 0 587 233 120 0 chr10 69603214 69603364 -70713401 + MER6B DNA MER2_type 2 169 -41 575 250 107 19 chr10 69603605 69603821 -70712944 + L1MC/D LINE L1 5337 5571 -2237 2269 98 37 0 chr10 69603924 69604221 -70712544 - AluY SINE Alu -3 308 1 21 57 0 0 chr10 69604734 69604769 -70711996 + AT_rich Low_complexity Low_complexity 1 35 0 695 183 0 0 chr10 69604772 69604892 -70711873 - FLAM_C SINE Alu -22 121 2 23 54 0 0 chr10 69605448 69605485 -70711280 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr10 69605895 69605929 -70710836 + AT_rich Low_complexity Low_complexity 1 34 0 399 238 104 26 chr10 69606233 69606387 -70710378 + L1ME LINE L1 4454 4627 -1519 246 62 0 0 chr10 69606387 69606419 -70710346 + (TG)n Simple_repeat Simple_repeat 2 33 0 399 238 104 26 chr10 69606419 69606457 -70710308 + L1ME LINE L1 4627 4661 -1485 330 224 154 51 chr10 69606443 69606599 -70710166 + L1ME LINE L1 4937 5108 -1038 * 1409 216 23 13 chr10 69606623 69606928 -70709837 + AluJb SINE Alu 1 308 -4 307 161 269 11 chr10 69606931 69607024 -70709741 + AluJo/FRAM SINE Alu 185 301 -1 1286 149 126 12 chr10 69607041 69607296 -70709469 + AluJb SINE Alu 29 312 0 214 149 30 45 chr10 69607318 69607385 -70709380 + (TA)n Simple_repeat Simple_repeat 2 67 0 319 276 48 8 chr10 69607398 69607562 -70709203 + L1ME LINE L1 5282 5442 -722 227 128 26 0 chr10 69607564 69607603 -70709162 + Alu SINE Alu 1 40 -263 505 151 0 12 chr10 69607603 69607689 -70709076 + AluSg/x SINE Alu 206 290 -20 807 166 0 7 chr10 69608537 69608676 -70708089 - L1PB4 LINE L1 -4 6152 6015 1495 182 0 58 chr10 69608746 69609076 -70707689 - AluJo SINE Alu -1 311 1 38 39 0 0 chr10 69609202 69609254 -70707511 + AT_rich Low_complexity Low_complexity 1 52 0 1072 117 0 0 chr10 69609387 69609524 -70707241 + AluSq/x SINE Alu 1 137 -176 1828 153 33 3 chr10 69609524 69609824 -70706941 + AluSx SINE Alu 1 309 -3 1631 170 35 10 chr10 69609911 69610199 -70706566 + AluJo SINE Alu 1 295 -17 29 78 0 0 chr10 69610282 69610346 -70706419 + AT_rich Low_complexity Low_complexity 1 64 0 2478 55 0 58 chr10 69610348 69610675 -70706090 + AluY SINE Alu 1 308 -3 2121 99 0 52 chr10 69610738 69611062 -70705703 + AluSq SINE Alu 7 313 0 2081 124 0 7 chr10 69611071 69611369 -70705396 + AluSq SINE Alu 18 313 0 29 28 0 0 chr10 69611431 69611467 -70705298 + AT_rich Low_complexity Low_complexity 1 36 0 685 215 81 12 chr10 69611790 69611962 -70704803 + L1ME3A LINE L1 5982 6165 -5 2093 118 31 0 chr10 69612077 69612364 -70704401 + AluSx SINE Alu 1 296 -16 1370 120 11 0 chr10 69612558 69612749 -70704016 - AluSx SINE Alu -119 193 1 732 167 0 0 chr10 69612808 69612922 -70703843 - AluSg/x SINE Alu -10 302 189 750 113 27 3 chr10 69613264 69613482 -70703283 + AluSx SINE Alu 8 302 -8 22 56 0 0 chr10 69613821 69613857 -70702908 + AT_rich Low_complexity Low_complexity 1 36 0 714 220 50 6 chr10 69614050 69614209 -70702556 - AluJb SINE Alu -16 296 131 2488 46 20 7 chr10 69614220 69614526 -70702239 + AluY SINE Alu 1 310 -1 1196 133 4 86 chr10 69614541 69614713 -70702052 - MER31A LTR ERV1 -194 291 141 2315 107 0 0 chr10 69614713 69615011 -70701754 + AluSx SINE Alu 1 298 -14 1196 133 4 86 chr10 69615011 69615071 -70701694 - MER31A LTR ERV1 -344 141 78 884 212 6 6 chr10 69615071 69615236 -70701529 + FAM SINE Alu 1 165 -10 2316 114 0 0 chr10 69615443 69615750 -70701015 - AluSg SINE Alu -3 307 1 1620 198 0 13 chr10 69615755 69616053 -70700712 - AluJb SINE Alu -18 294 1 2076 158 0 0 chr10 69618869 69619173 -70697592 + AluSx SINE Alu 1 304 -8 813 180 0 0 chr10 69620327 69620455 -70696310 - FLAM_C SINE Alu -10 133 6 352 263 179 26 chr10 69620666 69620822 -70695943 - MIR SINE MIR -66 196 17 2514 54 7 3 chr10 69620873 69621171 -70695594 + AluY SINE Alu 1 299 -12 963 209 4 36 chr10 69621618 69621843 -70694922 - MER20 DNA MER1_type -1 218 1 2044 119 41 0 chr10 69621908 69622203 -70694562 + AluSq SINE Alu 1 307 -6 332 269 120 43 chr10 69622544 69622752 -70694013 - L1ME4a LINE L1 -273 5848 5625 2011 36 72 20 chr10 69622758 69623008 -70693757 + AluY SINE Alu 29 291 -20 1094 174 191 0 chr10 69624230 69624496 -70692269 - AluJb SINE Alu 0 312 1 2355 93 7 0 chr10 69625372 69625673 -70691092 + AluSq SINE Alu 1 303 -10 277 201 49 118 chr10 69625677 69625821 -70690944 - L2 LINE L2 -253 3060 2927 2233 95 0 3 chr10 69625881 69626185 -70690580 + AluSx SINE Alu 1 303 -9 1021 166 266 55 chr10 69626302 69626591 -70690174 - MLT1F1 LTR MaLR -54 513 164 619 129 0 143 chr10 69626610 69626750 -70690015 + FAM SINE Alu 1 47 -2 300 173 58 0 chr10 69627039 69627091 -70689674 - MLT1F1 LTR MaLR -324 243 189 198 0 0 0 chr10 69627201 69627223 -70689542 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 3088 143 2 4 chr10 69627375 69627831 -70688934 + MER1A DNA MER1_type 40 494 -35 1925 90 8 0 chr10 69627832 69628077 -70688688 - AluY SINE Alu -32 279 33 242 268 0 0 chr10 69628196 69628252 -70688513 + L2 LINE L2 3258 3313 0 1936 134 10 3 chr10 69628291 69628589 -70688176 + AluSx SINE Alu 1 300 -12 1342 168 44 61 chr10 69628599 69628724 -70688041 + AluJb SINE Alu 5 131 -181 2416 70 3 0 chr10 69628724 69629022 -70687743 - AluY SINE Alu -12 299 1 1342 168 44 61 chr10 69629022 69629193 -70687572 + AluJb SINE Alu 131 296 -16 22 56 0 0 chr10 69629385 69629421 -70687344 + AT_rich Low_complexity Low_complexity 1 36 0 687 143 67 0 chr10 69629760 69629879 -70686886 - AluSg/x SINE Alu -8 304 178 311 242 0 0 chr10 69629988 69630054 -70686711 + AluSc SINE Alu 220 285 -14 1989 112 26 26 chr10 69630123 69630435 -70686330 - AluSx SINE Alu 0 312 1 339 224 53 0 chr10 69630460 69630536 -70686229 - L1ME3A LINE L1 -8 6162 6083 1927 167 0 19 chr10 69630680 69630998 -70685767 - AluJb SINE Alu 0 312 1 658 174 10 117 chr10 69631007 69631069 -70685696 - L1MB7 LINE L1 -17 6167 6100 2144 136 0 0 chr10 69631069 69631370 -70685395 + AluSq SINE Alu 1 301 -12 658 174 10 117 chr10 69631370 69631503 -70685262 - L1MB7 LINE L1 -84 6100 5993 1426 202 3 24 chr10 69631521 69631808 -70684957 - AluJo SINE Alu -11 301 21 400 173 0 0 chr10 69631909 69631990 -70684775 + L1MA8 LINE L1 6209 6289 -2 793 250 0 0 chr10 69632011 69632171 -70684594 + FRAM SINE Alu 1 160 -16 1879 100 4 19 chr10 69632173 69632433 -70684332 + AluSc SINE Alu 1 256 -53 302 91 18 0 chr10 69632447 69632502 -70684263 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 710 180 127 40 chr10 69632502 69632652 -70684113 + 7SLRNA srpRNA srpRNA 135 297 -23 896 112 0 0 chr10 69632652 69632777 -70683988 + AluSp/q SINE Alu 182 306 -7 784 215 107 10 chr10 69632828 69633033 -70683732 - MER58B DNA MER1_type 0 341 117 2413 68 13 3 chr10 69633125 69633432 -70683333 + AluY SINE Alu 1 310 -1 1725 127 0 0 chr10 69633454 69633706 -70683059 + AluSg SINE Alu 44 295 -15 2023 128 3 0 chr10 69633750 69634040 -70682725 + AluSx SINE Alu 5 295 -17 1376 149 76 43 chr10 69634207 69634547 -70682218 + AluJb SINE Alu 1 349 0 1565 127 0 0 chr10 69634548 69634768 -70681997 - AluSg/x SINE Alu -27 285 66 357 138 17 0 chr10 69634768 69634826 -70681939 + AluSp/q SINE Alu 244 302 -1 414 0 0 0 chr10 69635161 69635207 -70681558 + (CA)n Simple_repeat Simple_repeat 1 46 0 484 195 158 68 chr10 69635363 69635553 -70681212 - MER106A DNA MER1_type 0 236 30 1184 174 5 0 chr10 69635894 69636090 -70680675 + AluSx SINE Alu 1 197 -115 1294 129 26 0 chr10 69636096 69636290 -70680475 - AluSg/x SINE Alu -21 291 93 301 114 0 23 chr10 69636290 69636334 -70680431 - Alu SINE Alu -264 44 2 697 131 8 33 chr10 69636334 69636456 -70680309 + AluSx SINE Alu 188 306 -6 1790 143 31 0 chr10 69636684 69636971 -70679794 + AluSx SINE Alu 1 296 -16 27 0 0 0 chr10 69637993 69638020 -70678745 + AT_rich Low_complexity Low_complexity 1 27 0 2351 65 3 23 chr10 69638120 69638430 -70678335 - AluY SINE Alu -7 304 1 831 242 0 0 chr10 69638444 69638609 -70678156 - AluJ SINE Alu -1 301 137 1013 125 17 45 chr10 69638612 69638788 -70677977 - AluSp SINE Alu -10 303 133 2043 92 10 23 chr10 69638794 69639100 -70677665 - AluY SINE Alu -8 303 2 549 234 86 8 chr10 69639142 69639270 -70677495 - AluJb SINE Alu -173 139 2 2237 116 0 0 chr10 69639302 69639605 -70677160 - AluSg SINE Alu -7 303 1 1348 116 170 98 chr10 69639607 69639883 -70676882 - AluSx SINE Alu -8 304 9 2046 123 30 0 chr10 69639912 69640212 -70676553 - AluSx SINE Alu -3 309 1 836 22 0 0 chr10 69640231 69640323 -70676442 - L1PA3 LINE L1 -5 6150 6059 26 64 0 0 chr10 69640445 69640492 -70676273 + AT_rich Low_complexity Low_complexity 1 47 0 1778 126 38 0 chr10 69641215 69641476 -70675289 - AluSx SINE Alu -39 273 3 21 0 0 0 chr10 69641623 69641644 -70675121 + AT_rich Low_complexity Low_complexity 1 21 0 1705 119 146 0 chr10 69641653 69641913 -70674852 + AluSg SINE Alu 1 298 -2 3563 149 2 0 chr10 69642116 69642647 -70674118 + L1PA14 LINE L1 5627 6158 -3 24 53 0 0 chr10 69642813 69642851 -70673914 + AT_rich Low_complexity Low_complexity 1 38 0 1025 227 123 38 chr10 69643274 69643745 -70673020 + L1MC4 LINE L1 7477 7987 -55 1923 79 68 54 chr10 69643750 69644030 -70672735 + AluSg SINE Alu 1 284 -26 1536 124 6 133 chr10 69644048 69644386 -70672379 + AluJb SINE Alu 10 304 -8 656 249 91 12 chr10 69644459 69644624 -70672141 - AluJo SINE Alu -31 281 104 216 0 0 0 chr10 69644692 69644716 -70672049 + (TC)n Simple_repeat Simple_repeat 1 24 0 1011 221 4 38 chr10 69644725 69644965 -70671800 - AluJo SINE Alu -47 265 34 2185 95 0 35 chr10 69645255 69645572 -70671193 - AluSq SINE Alu -6 307 2 1097 101 6 19 chr10 69646425 69646602 -70670163 - AluY SINE Alu 0 311 137 1052 168 55 21 chr10 69646934 69647172 -70669593 - AluY SINE Alu -30 281 36 1341 95 0 0 chr10 69647172 69647341 -70669424 - AluY SINE Alu -142 169 1 707 156 49 16 chr10 69647740 69647862 -70668903 + FLAM_C SINE Alu 5 130 -13 23 0 0 0 chr10 69647862 69647885 -70668880 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 69648376 69648406 -70668359 + AT_rich Low_complexity Low_complexity 1 30 0 1246 182 9 9 chr10 69648604 69648824 -70667941 + AluJo SINE Alu 3 222 -90 25 31 0 0 chr10 69649032 69649064 -70667701 + AT_rich Low_complexity Low_complexity 1 32 0 474 138 0 0 chr10 69649105 69649170 -70667595 + AluS SINE Alu 6 70 -243 24 53 0 0 chr10 69649170 69649208 -70667557 + AT_rich Low_complexity Low_complexity 1 38 0 322 271 8 8 chr10 69649405 69649523 -70667242 + AluSc SINE Alu 182 299 0 27 49 0 0 chr10 69650184 69650225 -70666540 + AT_rich Low_complexity Low_complexity 1 41 0 262 216 169 47 chr10 69650334 69650482 -70666283 + L1MDa LINE L1 1876 2041 -4499 26 0 0 0 chr10 69650554 69650580 -70666185 + AT_rich Low_complexity Low_complexity 1 26 0 327 214 56 48 chr10 69650729 69650855 -70665910 + MER112 DNA MER1_type 7 133 -127 1792 118 4 12 chr10 69650964 69651219 -70665546 - AluSq SINE Alu 0 313 61 339 102 0 0 chr10 69651222 69651271 -70665494 + AluJ/F(R)AM SINE Alu 158 206 -105 2430 133 18 0 chr10 69652198 69652581 -70664184 + HSMAR2 DNA Mariner 3 392 -910 593 219 123 0 chr10 69652581 69652736 -70664029 - FAM SINE Alu 0 175 2 2073 123 7 3 chr10 69652868 69653168 -70663597 - AluSq SINE Alu -12 301 1 261 0 0 0 chr10 69653171 69653200 -70663565 + (TG)n Simple_repeat Simple_repeat 2 30 0 744 86 0 0 chr10 69653209 69653314 -70663451 + (TA)n Simple_repeat Simple_repeat 1 105 0 225 0 0 0 chr10 69653324 69653349 -70663416 + (CA)n Simple_repeat Simple_repeat 1 25 0 2129 101 39 0 chr10 69653634 69653920 -70662845 - AluY SINE Alu -14 297 1 946 111 0 30 chr10 69653926 69654061 -70662704 - AluSq/x SINE Alu -182 131 1 4775 138 20 26 chr10 69654061 69654895 -70661870 + HSMAR2 DNA Mariner 383 1252 -50 748 184 104 40 chr10 69654925 69655002 -70661763 - AluJo SINE Alu -97 215 144 1802 75 119 8 chr10 69655002 69655255 -70661510 - AluSp SINE Alu -21 292 12 748 184 104 40 chr10 69655255 69655272 -70661493 - AluJo SINE Alu -168 144 130 195 69 0 0 chr10 69655272 69655301 -70661464 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 748 184 104 40 chr10 69655301 69655406 -70661359 - AluJo SINE Alu -182 130 2 378 335 11 34 chr10 69655415 69655591 -70661174 - L2 LINE L2 -571 2743 2572 336 311 93 6 chr10 69655623 69655784 -70660981 - L2 LINE L2 -928 2386 2212 1868 127 0 0 chr10 69655814 69656066 -70660699 + AluSq SINE Alu 1 252 -61 2102 133 0 22 chr10 69656240 69656557 -70660208 + AluSx SINE Alu 1 310 -2 2167 124 0 0 chr10 69657021 69657320 -70659445 - AluSx SINE Alu -13 299 1 1462 200 0 24 chr10 69657693 69657988 -70658777 - AluJb SINE Alu -18 294 7 731 219 41 14 chr10 69658853 69658999 -70657766 - FRAM SINE Alu -11 165 16 553 96 14 0 chr10 69659047 69659120 -70657645 + AluS SINE Alu 19 92 -221 409 116 0 187 chr10 69659233 69659308 -70657457 - MER34C LTR ERV1 -484 101 5 464 159 45 0 chr10 69659310 69659398 -70657367 + L1M4 LINE L1 5699 5790 -394 283 235 82 0 chr10 69659422 69659507 -70657258 + U13 snRNA snRNA 1 92 -12 2302 86 7 3 chr10 69659507 69659808 -70656957 + AluSp SINE Alu 2 303 -10 21 36 0 0 chr10 69659813 69659841 -70656924 + AT_rich Low_complexity Low_complexity 1 28 0 2475 80 0 6 chr10 69659843 69660154 -70656611 + AluSg SINE Alu 1 309 -1 2397 109 18 149 chr10 69660155 69660355 -70656410 - MER31A LTR ERV1 -5 480 256 1532 178 3 47 chr10 69660355 69660653 -70656112 + AluJo SINE Alu 14 298 -14 2737 32 0 6 chr10 69660654 69660967 -70655798 + AluY SINE Alu 1 311 0 2397 109 18 149 chr10 69660967 69661156 -70655609 - MER31A LTR ERV1 -229 256 44 2295 105 0 0 chr10 69661156 69661452 -70655313 + AluSx SINE Alu 1 296 -16 2397 109 18 149 chr10 69661452 69661512 -70655253 - MER31A LTR ERV1 -441 44 109 944 212 6 6 chr10 69661512 69661677 -70655088 + FAM SINE Alu 1 165 -10 2397 109 18 149 chr10 69661677 69661775 -70654990 - MER31A LTR ERV1 -375 110 1 2058 97 4 0 chr10 69661789 69662056 -70654709 - AluSx SINE Alu -6 306 39 311 192 14 0 chr10 69662064 69662137 -70654628 + CT-rich Low_complexity Low_complexity 1 74 0 1334 162 0 37 chr10 69662146 69662387 -70654378 - AluJb SINE Alu 0 312 81 2833 197 51 47 chr10 69662392 69662961 -70653804 - MER31A-int LTR ERV1 -53 4883 4309 2400 84 3 0 chr10 69662961 69663259 -70653506 - AluSq SINE Alu -14 299 1 2833 197 51 47 chr10 69663259 69663436 -70653329 - MER31A-int LTR ERV1 -627 4309 4134 1969 141 13 10 chr10 69663450 69663756 -70653009 - AluSx SINE Alu -5 307 1 437 61 0 30 chr10 69663979 69664045 -70652720 + (TCCCC)n Simple_repeat Simple_repeat 1 64 0 1107 119 6 6 chr10 69664046 69664205 -70652560 - AluSg/x SINE Alu -24 288 130 770 170 22 37 chr10 69664287 69664422 -70652343 - AluJo SINE Alu -176 136 4 1625 196 59 55 chr10 69664493 69664521 -70652244 - MER31A-int LTR ERV1 -812 5134 5108 1989 63 3 121 chr10 69664521 69664875 -70651890 + AluY SINE Alu 1 311 0 1625 196 59 55 chr10 69664875 69665389 -70651376 - MER31A-int LTR ERV1 -838 5108 3498 2448 74 0 0 chr10 69665389 69665739 -70651026 + AluY SINE Alu 1 350 0 1330 180 75 58 chr10 69665742 69666042 -70650723 + L1MB7 LINE L1 5798 6106 -78 2157 100 10 0 chr10 69666042 69666331 -70650434 - AluSq SINE Alu -21 292 1 1330 180 75 58 chr10 69666331 69666392 -70650373 + L1MB7 LINE L1 6106 6165 -19 3980 73 45 40 chr10 69666417 69666742 -70650023 + L1PA6 LINE L1 5546 5877 -277 2368 58 10 3 chr10 69666742 69667037 -70649728 - AluY SINE Alu -13 298 2 3980 73 45 40 chr10 69667037 69667316 -70649449 + L1PA6 LINE L1 5877 6153 -1 855 160 15 0 chr10 69668142 69668273 -70648492 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr10 69669819 69669840 -70646925 + AT_rich Low_complexity Low_complexity 1 21 0 2397 100 3 0 chr10 69670096 69670407 -70646358 - AluSx SINE Alu 0 312 1 197 286 44 33 chr10 69671712 69671803 -70644962 - MIR SINE MIR -63 145 54 29 28 0 0 chr10 69672114 69672150 -70644615 + AT_rich Low_complexity Low_complexity 1 36 0 2339 90 0 3 chr10 69672276 69672577 -70644188 + AluSg1 SINE Alu 1 300 -9 21 0 0 0 chr10 69673049 69673070 -70643695 + AT_rich Low_complexity Low_complexity 1 21 0 297 314 172 0 chr10 69674323 69674492 -70642273 - MIR SINE MIR -3 259 62 2038 130 17 0 chr10 69674601 69674900 -70641865 - AluSx SINE Alu -6 306 3 1330 114 0 0 chr10 69674936 69675112 -70641653 - AluSg/x SINE Alu -3 309 134 1674 146 93 0 chr10 69675113 69675381 -70641384 - AluSx SINE Alu -19 293 1 309 204 182 0 chr10 69675384 69675472 -70641293 - MER112 DNA MER1_type -4 256 153 324 200 133 33 chr10 69675517 69675637 -70641128 - L1ME3A LINE L1 0 6170 6039 2372 78 7 3 chr10 69675684 69675863 -70640902 - AluY SINE Alu 0 311 129 2252 50 0 75 chr10 69675863 69676221 -70640544 - AluY SINE Alu 0 311 1 2372 78 7 3 chr10 69676221 69676350 -70640415 - AluY SINE Alu -182 129 2 865 121 0 0 chr10 69676350 69676466 -70640299 - AluSq/x SINE Alu -178 135 20 2159 118 3 3 chr10 69676471 69676776 -70639989 - AluSg SINE Alu -5 305 1 2431 87 0 0 chr10 69677008 69677308 -70639457 + AluY SINE Alu 1 300 -11 2179 119 7 0 chr10 69677318 69677613 -70639152 + AluSp SINE Alu 1 297 -16 1629 159 10 10 chr10 69677621 69677911 -70638854 + AluSx SINE Alu 1 290 -22 676 188 0 8 chr10 69677913 69678030 -70638735 - AluJo/FLAM SINE Alu -186 116 1 881 204 61 6 chr10 69678063 69678244 -70638521 + AluJb SINE Alu 119 309 -3 1958 95 24 27 chr10 69678298 69678593 -70638172 + AluSp SINE Alu 2 295 -18 801 96 9 0 chr10 69678654 69678769 -70637996 + AluSp SINE Alu 32 147 -166 573 143 0 0 chr10 69678769 69678860 -70637905 + AluSg/x SINE Alu 212 302 -8 27 29 0 0 chr10 69679090 69679124 -70637641 + AT_rich Low_complexity Low_complexity 1 34 0 1727 171 10 3 chr10 69679275 69679579 -70637186 + AluJb SINE Alu 1 306 -6 2106 102 0 0 chr10 69679599 69679892 -70636873 - AluY SINE Alu -18 293 1 2223 63 3 3 chr10 69680157 69680443 -70636322 + AluY SINE Alu 1 286 -25 1944 127 6 19 chr10 69680712 69681026 -70635739 + AluSg SINE Alu 1 310 0 2053 113 10 7 chr10 69681109 69681411 -70635354 - AluSx SINE Alu -9 303 1 2181 104 3 0 chr10 69681421 69681730 -70635035 - AluSp SINE Alu -3 310 1 1606 182 3 7 chr10 69681762 69682064 -70634701 + AluJb SINE Alu 1 301 -11 1991 112 0 30 chr10 69682066 69682369 -70634396 + AluSx SINE Alu 1 294 -18 662 214 0 30 chr10 69682379 69682510 -70634255 + FLAM_A SINE Alu 2 128 -5 32 44 0 29 chr10 69682598 69682641 -70634124 + AT_rich Low_complexity Low_complexity 1 43 -23 1367 211 18 0 chr10 69682641 69682769 -70633996 + AluJb SINE Alu 1 125 -187 1880 131 7 10 chr10 69682769 69683074 -70633691 + AluSg SINE Alu 1 304 -6 1367 211 18 0 chr10 69683074 69683230 -70633535 + AluJb SINE Alu 125 290 -22 32 44 0 29 chr10 69683230 69683254 -70633511 + AT_rich Low_complexity Low_complexity 43 66 0 837 117 0 22 chr10 69683254 69683391 -70633374 + AluSq/x SINE Alu 1 134 -178 2114 89 26 3 chr10 69683396 69683700 -70633065 + AluSp SINE Alu 1 311 -2 2043 108 10 3 chr10 69683784 69684089 -70632676 + AluSp SINE Alu 1 307 -6 312 70 0 0 chr10 69684747 69684790 -70631975 + (TA)n Simple_repeat Simple_repeat 1 43 0 351 256 70 16 chr10 69684852 69684981 -70631784 + L1MC/D LINE L1 5309 5444 -2364 1034 83 0 0 chr10 69685206 69685339 -70631426 + AluSq/x SINE Alu 1 133 -180 313 202 269 10 chr10 69685418 69685522 -70631243 + MLT1H LTR MaLR 399 529 -20 1107 123 0 24 chr10 69685531 69685701 -70631064 - AluSg SINE Alu -144 166 1 401 278 22 89 chr10 69685703 69685798 -70630967 + L1MC/D LINE L1 5548 5648 -2160 799 139 0 44 chr10 69685798 69685935 -70630830 - FLAM_C SINE Alu 0 133 3 401 278 22 89 chr10 69685935 69686035 -70630730 + L1MC/D LINE L1 5648 5723 -2085 1764 126 17 23 chr10 69686035 69686336 -70630429 + AluSx SINE Alu 12 310 -2 401 278 22 89 chr10 69686336 69686409 -70630356 + L1MC/D LINE L1 5723 5799 -2009 1191 162 0 30 chr10 69686482 69686658 -70630107 - AluSg/x SINE Alu 0 310 130 213 39 0 0 chr10 69686658 69686684 -70630081 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1898 130 3 0 chr10 69686684 69686968 -70629797 - AluSq SINE Alu -28 285 1 1191 162 0 30 chr10 69686968 69687025 -70629740 - AluSg/x SINE Alu -178 132 83 464 200 31 50 chr10 69687193 69687353 -70629412 + L1M4 LINE L1 3064 3220 -2926 697 162 0 0 chr10 69687355 69687460 -70629305 + FLAM_C SINE Alu 3 107 -36 313 264 52 36 chr10 69687464 69687657 -70629108 - L1 LINE L1 -2739 3407 3212 2373 63 0 19 chr10 69687660 69688011 -70628754 - AluY SINE Alu 0 345 1 1453 194 37 14 chr10 69688026 69688196 -70628569 - AluJb SINE Alu 0 302 121 2049 93 0 59 chr10 69688196 69688381 -70628384 - AluSp SINE Alu -9 304 144 2480 46 3 3 chr10 69688381 69688684 -70628081 - AluY SINE Alu -8 303 1 2049 93 0 59 chr10 69688684 69688820 -70627945 - AluSp SINE Alu -169 144 2 1453 194 37 14 chr10 69688820 69688943 -70627822 - AluJb SINE Alu -181 121 2 1356 57 21 42 chr10 69688967 69689159 -70627606 - AluSp SINE Alu -8 305 118 1934 103 7 27 chr10 69689189 69689481 -70627284 + AluSg SINE Alu 11 296 -14 33 56 0 14 chr10 69689481 69689492 -70627273 + AT_rich Low_complexity Low_complexity 1 11 -60 1724 156 0 7 chr10 69689492 69689781 -70626984 + AluSq SINE Alu 1 287 -26 33 56 0 14 chr10 69689781 69689841 -70626924 + AT_rich Low_complexity Low_complexity 11 71 0 216 0 0 0 chr10 69690182 69690206 -70626559 + (T)n Simple_repeat Simple_repeat 1 24 0 1734 153 0 14 chr10 69690230 69690524 -70626241 - AluJb SINE Alu -1 311 22 207 0 0 0 chr10 69690716 69690739 -70626026 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2247 92 0 3 chr10 69691431 69691734 -70625031 - AluSq SINE Alu -11 302 1 4757 50 3 23 chr10 69691827 69692145 -70624620 + L1PA5 LINE L1 5552 5854 -300 2416 50 0 3 chr10 69692145 69692443 -70624322 - AluY SINE Alu -13 298 2 4757 50 3 23 chr10 69692443 69692738 -70624027 + L1PA5 LINE L1 5854 6153 -1 2176 87 3 0 chr10 69694496 69694795 -70621970 + AluSg SINE Alu 1 300 -10 1346 63 5 37 chr10 69694937 69695170 -70621595 - AluY SINE Alu 0 311 111 2302 90 0 0 chr10 69695382 69695681 -70621084 + AluY SINE Alu 1 299 -12 2157 112 3 0 chr10 69695691 69695986 -70620779 + AluSp SINE Alu 1 296 -17 1629 159 10 10 chr10 69695994 69696284 -70620481 + AluSx SINE Alu 1 290 -22 676 188 0 8 chr10 69696286 69696403 -70620362 - AluJo/FLAM SINE Alu -186 116 1 881 204 61 6 chr10 69696436 69696617 -70620148 + AluJb SINE Alu 119 309 -3 2001 88 24 27 chr10 69696671 69696966 -70619799 + AluSp SINE Alu 2 295 -18 801 96 9 0 chr10 69697027 69697142 -70619623 + AluSp SINE Alu 32 147 -166 579 141 0 0 chr10 69697142 69697234 -70619531 + AluSg/x SINE Alu 211 302 -7 27 29 0 0 chr10 69697464 69697498 -70619267 + AT_rich Low_complexity Low_complexity 1 34 0 1727 171 10 3 chr10 69697648 69697952 -70618813 + AluJb SINE Alu 1 306 -6 2114 102 0 0 chr10 69697972 69698266 -70618499 - AluY SINE Alu -17 294 1 310 253 13 121 chr10 69698517 69698531 -70618234 - MIR3 SINE MIR -1 207 193 2233 98 7 0 chr10 69698531 69698836 -70617929 + AluSg SINE Alu 1 307 -3 310 253 13 121 chr10 69698836 69698879 -70617886 - MIR3 SINE MIR -15 193 147 1604 129 7 32 chr10 69698879 69699157 -70617608 - AluSx SINE Alu -5 307 37 310 253 13 121 chr10 69699157 69699290 -70617475 - MIR3 SINE MIR -61 147 36 284 123 0 35 chr10 69699625 69699682 -70617083 - Alu SINE Alu 0 300 246 1737 138 19 0 chr10 69699684 69699953 -70616812 - AluSx SINE Alu -38 274 1 390 188 71 0 chr10 69700192 69700277 -70616488 - FLAM_A SINE Alu 0 133 43 1928 122 14 3 chr10 69700488 69700783 -70615982 + AluSx SINE Alu 1 298 -14 823 222 24 24 chr10 69700783 69700990 -70615775 + MER3 DNA MER1_type 3 209 0 2468 51 0 10 chr10 69701071 69701384 -70615381 - AluY SINE Alu -1 310 1 336 238 122 82 chr10 69701387 69701534 -70615231 + AluJo/FRAM SINE Alu 146 298 -4 412 224 35 0 chr10 69701589 69701674 -70615091 - FLAM SINE Alu -4 129 42 1991 112 10 7 chr10 69701738 69702034 -70614731 - AluSq SINE Alu -16 297 1 21 36 0 0 chr10 69702128 69702156 -70614609 + AT_rich Low_complexity Low_complexity 1 28 0 2030 108 0 3 chr10 69702165 69702451 -70614314 - AluSc SINE Alu -24 285 1 1401 228 3 7 chr10 69702505 69702808 -70613957 - AluJb SINE Alu -10 302 1 1904 148 23 0 chr10 69703401 69703706 -70613059 - AluSx SINE Alu 0 312 1 1870 132 4 0 chr10 69704152 69704464 -70612301 - AluSx SINE Alu 0 313 1 837 205 19 0 chr10 69704596 69704757 -70612008 + FRAM SINE Alu 2 165 -1 1835 170 0 3 chr10 69704943 69705254 -70611511 + AluJb SINE Alu 1 310 -2 645 141 0 10 chr10 69705356 69705455 -70611310 + FLAM_C SINE Alu 21 118 -25 1946 131 24 0 chr10 69705476 69705773 -70610992 - AluSx SINE Alu -2 310 7 22 35 0 0 chr10 69705778 69705807 -70610958 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 69705875 69705904 -70610861 + AT_rich Low_complexity Low_complexity 1 29 0 655 173 0 10 chr10 69706199 69706303 -70610462 + AluJo/FLAM SINE Alu 14 116 -196 * 808 161 0 21 chr10 69706300 69706443 -70610322 - AluSg/x SINE Alu 0 312 173 1604 174 7 10 chr10 69706881 69707175 -70609590 + AluJb SINE Alu 1 293 -19 1151 172 48 139 chr10 69707189 69707521 -70609244 - AluJo SINE Alu 0 302 1 500 168 89 0 chr10 69707536 69707637 -70609128 - HY1 scRNA scRNA 0 112 3 1977 133 7 0 chr10 69707668 69707968 -70608797 - AluSx SINE Alu -10 302 1 2886 158 62 11 chr10 69708075 69708644 -70608121 - L1MA8 LINE L1 -48 6243 5646 1468 193 27 3 chr10 69709039 69709335 -70607430 + AluJb SINE Alu 1 303 -9 207 200 0 0 chr10 69709483 69709528 -70607237 + T-rich Low_complexity Low_complexity 2 46 0 2163 80 3 45 chr10 69709949 69710261 -70606504 + AluSp SINE Alu 1 299 -14 34 24 0 0 chr10 69710408 69710449 -70606316 + AT_rich Low_complexity Low_complexity 1 41 0 1084 133 0 0 chr10 69710586 69710744 -70606021 + AluSx SINE Alu 6 163 -149 180 152 0 30 chr10 69710912 69710945 -70605820 - L3 LINE CR1 -1128 449 418 255 93 0 111 chr10 69710947 69710974 -70605791 - L1P4 LINE L1 -314 5849 5829 2014 117 7 3 chr10 69710974 69711265 -70605500 - AluSq SINE Alu -21 292 1 255 93 0 111 chr10 69711265 69711291 -70605474 - L1P4 LINE L1 -334 5829 5802 766 197 8 0 chr10 69712206 69712338 -70604427 + AluJo SINE Alu 2 134 -178 1916 125 0 14 chr10 69712700 69713034 -70603731 - AluSx SINE Alu 0 330 1 456 323 95 0 chr10 69713209 69713367 -70603398 - MER58C DNA MER1_type -42 173 1 332 263 90 15 chr10 69713371 69713504 -70603261 + L1MC4a LINE L1 5783 5925 -1883 1620 137 4 26 chr10 69714463 69714734 -70602031 - AluSx SINE Alu -47 265 1 1428 129 5 5 chr10 69714747 69714971 -70601794 - AluSg/x SINE Alu -10 300 77 1705 121 110 7 chr10 69715000 69715281 -70601484 - AluSg SINE Alu 0 310 1 2007 114 6 41 chr10 69715356 69715533 -70601232 - AluSx SINE Alu -8 304 122 387 60 0 0 chr10 69715533 69715583 -70601182 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1892 139 0 4 chr10 69715583 69715864 -70600901 - AluSg1 SINE Alu -29 280 1 2007 114 6 41 chr10 69715864 69716000 -70600765 - AluSx SINE Alu -188 124 1 623 229 0 23 chr10 69716159 69716290 -70600475 + FLAM_C SINE Alu 2 129 -4 937 198 70 112 chr10 69716653 69716805 -70599960 - AluJo SINE Alu 0 302 145 194 0 0 37 chr10 69716805 69716832 -70599933 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2059 100 7 7 chr10 69716832 69717121 -70599644 - AluSq SINE Alu -24 289 1 937 198 70 112 chr10 69717121 69717281 -70599484 - AluJo SINE Alu -155 147 2 2227 90 0 10 chr10 69717281 69717581 -70599184 - AluSq SINE Alu -15 298 2 492 234 86 8 chr10 69717623 69717751 -70599014 - AluJb SINE Alu -173 139 2 2148 112 0 0 chr10 69717783 69718086 -70598679 - AluSg SINE Alu -7 303 1 1278 112 170 98 chr10 69718088 69718364 -70598401 - AluSx SINE Alu -8 304 9 1933 123 30 0 chr10 69718393 69718693 -70598072 - AluSx SINE Alu -3 309 1 796 22 0 0 chr10 69718712 69718804 -70597961 - L1PA3 LINE L1 -5 6150 6059 26 64 0 0 chr10 69718926 69718973 -70597792 + AT_rich Low_complexity Low_complexity 1 47 0 1912 114 0 0 chr10 69719696 69719969 -70596796 - AluSx SINE Alu -39 273 1 1132 127 9 8 chr10 69720011 69720232 -70596533 + AluSq SINE Alu 1 299 -14 1440 118 0 5 chr10 69720298 69720519 -70596246 - AluJb SINE Alu -7 305 86 1211 196 143 8 chr10 69720526 69720792 -70595973 - AluJb SINE Alu 0 302 1 21 0 0 0 chr10 69720803 69720824 -70595941 + AT_rich Low_complexity Low_complexity 1 21 0 583 122 16 65 chr10 69721102 69721225 -70595540 + L1MB3 LINE L1 6065 6181 -2 238 264 14 14 chr10 69721897 69721969 -70594796 + (TA)n Simple_repeat Simple_repeat 2 73 0 1983 125 0 28 chr10 69722011 69722330 -70594435 - AluSx SINE Alu -2 310 1 243 281 149 35 chr10 69722353 69722467 -70594298 + MIR SINE MIR 129 255 -7 2212 107 3 0 chr10 69722822 69723132 -70593633 - AluSq SINE Alu -2 311 1 1252 200 29 25 chr10 69723386 69723666 -70593099 + AluJo SINE Alu 1 281 -31 545 90 0 36 chr10 69723667 69723778 -70592987 + (TAGA)n Simple_repeat Simple_repeat 1 107 0 303 184 0 165 chr10 69724775 69724835 -70591930 + MIR SINE MIR 34 70 -138 738 125 139 0 chr10 69724835 69724979 -70591786 - FRAM SINE Alu -2 164 1 303 184 0 165 chr10 69724979 69725027 -70591738 + MIR SINE MIR 70 124 -84 2379 53 0 0 chr10 69725084 69725384 -70591381 - AluY SINE Alu -11 300 1 2086 108 3 3 chr10 69725734 69726039 -70590726 + AluSg SINE Alu 1 305 -5 256 244 136 57 chr10 69726221 69726279 -70590486 - MIR SINE MIR 0 262 210 1574 141 35 14 chr10 69726279 69726563 -70590202 - AluJb SINE Alu -19 293 4 256 244 136 57 chr10 69726563 69726680 -70590085 - MIR SINE MIR -52 210 73 309 353 11 16 chr10 69727022 69727206 -70589559 - MIR SINE MIR -2 260 78 1904 152 3 7 chr10 69727494 69727804 -70588961 - AluJb SINE Alu -3 309 1 2209 110 0 0 chr10 69728060 69728359 -70588406 - AluSx SINE Alu -13 299 1 1468 119 0 0 chr10 69728562 69728772 -70587993 - AluSg/x SINE Alu -8 302 93 1897 86 175 139 chr10 69728773 69729394 -70587371 + LTR12 LTR ERV1 1 2212 -226 1628 86 0 0 chr10 69729394 69729604 -70587161 + AluSc SINE Alu 1 210 -99 1282 142 14 5 chr10 69729604 69729823 -70586942 + AluSg/x SINE Alu 76 296 -14 301 169 46 0 chr10 69729830 69729895 -70586870 + HY1 scRNA scRNA 45 112 0 733 247 16 11 chr10 69729911 69730093 -70586672 + AluJo SINE Alu 2 184 -128 1345 71 16 0 chr10 69730270 69730452 -70586313 + AluY SINE Alu 110 294 -17 818 182 52 67 chr10 69730461 69730553 -70586212 - L1ME LINE L1 -720 5446 5354 1961 156 0 0 chr10 69730553 69730860 -70585905 - AluSq SINE Alu -6 307 1 818 182 52 67 chr10 69730860 69731013 -70585752 - L1ME LINE L1 -812 5354 5200 1941 151 0 0 chr10 69731013 69731324 -70585441 - AluSx SINE Alu -1 311 1 818 182 52 67 chr10 69731324 69731369 -70585396 - L1ME LINE L1 -966 5200 5156 1770 128 0 67 chr10 69731369 69731533 -70585232 - AluJb SINE Alu -17 295 122 2354 63 0 7 chr10 69731533 69731835 -70584930 - AluY SINE Alu -10 301 2 1770 128 0 67 chr10 69731835 69731848 -70584917 - AluJb SINE Alu -190 122 110 2181 98 3 13 chr10 69731848 69732164 -70584601 - AluSq SINE Alu 0 313 1 1770 128 0 67 chr10 69732164 69732297 -70584468 - AluJb SINE Alu -202 110 5 818 182 52 67 chr10 69732297 69732382 -70584383 - L1ME LINE L1 -1010 5156 5071 1988 115 0 11 chr10 69732382 69732712 -70584053 - AluSx SINE Alu 0 327 1 818 182 52 67 chr10 69732712 69733066 -70583699 - L1ME LINE L1 -1095 5071 4585 719 130 0 0 chr10 69733067 69733167 -70583598 + U6 snRNA snRNA 1 100 -7 430 211 0 42 chr10 69733180 69733275 -70583490 - L1ME LINE L1 -1552 4594 4504 225 0 0 0 chr10 69733668 69733693 -70583072 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1842 132 0 0 chr10 69733701 69733967 -70582798 - AluSx SINE Alu -41 271 6 2138 77 7 11 chr10 69733983 69734293 -70582472 - AluSp SINE Alu 0 309 1 710 236 19 6 chr10 69734761 69734918 -70581847 + MIR SINE MIR 93 251 -11 1597 179 7 16 chr10 69734924 69735232 -70581533 - AluJo SINE Alu -6 306 2 203 238 0 0 chr10 69735491 69735533 -70581232 + MIR SINE MIR 41 82 -126 1929 119 27 0 chr10 69736275 69736569 -70580196 - AluY SINE Alu -7 304 3 2003 121 7 0 chr10 69736955 69737253 -70579512 + AluJb SINE Alu 1 300 -12 1674 152 34 3 chr10 69737290 69737587 -70579178 + AluJb SINE Alu 1 306 -6 565 130 0 78 chr10 69737707 69737822 -70578943 + L1MA4 LINE L1 6174 6279 -21 2075 127 0 3 chr10 69737823 69738114 -70578651 + AluSx SINE Alu 2 291 -21 2157 98 0 0 chr10 69738115 69738410 -70578355 + AluSx SINE Alu 1 295 -17 328 259 0 74 chr10 69738410 69738513 -70578252 - L1MDa LINE L1 -4697 1685 1493 2704 26 0 0 chr10 69738513 69738822 -70577943 - AluYb8 SINE Alu -9 309 1 328 259 0 74 chr10 69738822 69738840 -70577925 - L1MDa LINE L1 -4889 1493 1475 1199 152 38 0 chr10 69738840 69739051 -70577714 - AluJo SINE Alu -4 308 90 2210 96 0 7 chr10 69739188 69739489 -70577276 - AluSq SINE Alu -14 299 1 593 254 61 12 chr10 69739490 69739726 -70577039 - HERVL68 LTR ERVL -69 5461 2821 268 138 46 92 chr10 69739823 69739888 -70576877 - HERVL68 LTR ERVL -261 2776 2715 2123 113 6 0 chr10 69739938 69740249 -70576516 - AluSp SINE Alu 0 313 1 2143 123 3 0 chr10 69740249 69740559 -70576206 - AluSq SINE Alu -2 311 1 1809 146 0 20 chr10 69740561 69740862 -70575903 - AluJb SINE Alu -17 295 1 464 171 48 29 chr10 69741035 69741140 -70575625 - HERVL68 LTR ERVL -345 2692 2586 1108 169 48 60 chr10 69741140 69741389 -70575376 + AluJo SINE Alu 46 291 -21 25 31 0 0 chr10 69741538 69741570 -70575195 + GC_rich Low_complexity Low_complexity 1 32 0 801 100 0 0 chr10 69742513 69742623 -70574142 + AluSq/x SINE Alu 2 111 -201 1654 119 0 4 chr10 69742623 69742867 -70573898 + AluSq SINE Alu 71 313 0 1976 131 7 0 chr10 69743670 69743961 -70572804 - AluSx SINE Alu -18 294 2 1947 103 11 0 chr10 69744497 69744804 -70571961 - AluSq SINE Alu 0 310 1 779 140 0 29 chr10 69745247 69745383 -70571382 - FLAM_C SINE Alu 0 133 2 1913 120 38 0 chr10 69745710 69746001 -70570764 + AluSx SINE Alu 1 302 -10 1404 194 16 36 chr10 69746085 69746389 -70570376 - AluJo SINE Alu -14 298 1 1991 97 0 11 chr10 69746400 69746678 -70570087 - AluSx SINE Alu -7 305 31 2662 143 61 31 chr10 69746678 69747154 -70569611 - LTR2B LTR ERV1 0 490 1 760 217 16 26 chr10 69747851 69748040 -70568725 - L1ME2 LINE L1 -13 6151 5965 2018 119 3 0 chr10 69748041 69748343 -70568422 - AluSx SINE Alu -9 303 1 2201 90 3 0 chr10 69748371 69748661 -70568104 - AluSq SINE Alu -22 291 1 1311 154 68 106 chr10 69748664 69748975 -70567790 - AluJo SINE Alu -3 299 1 2022 102 7 0 chr10 69749196 69749489 -70567276 - AluY SINE Alu -16 295 1 514 278 86 5 chr10 69749489 69749676 -70567089 + MIR SINE MIR 47 248 -14 291 342 25 8 chr10 69749928 69750048 -70566717 + MIR SINE MIR 19 140 -68 384 369 105 23 chr10 69750339 69750645 -70566120 - L2 LINE L2 -3 3269 2939 269 239 88 29 chr10 69751006 69751115 -70565650 + MIR SINE MIR 22 133 -75 1805 160 0 0 chr10 69751227 69751527 -70565238 - AluJb SINE Alu 0 312 13 2022 167 29 27 chr10 69751527 69751801 -70564964 - L1 LINE L1 -1765 4381 4104 2416 70 0 0 chr10 69751801 69752100 -70564665 + AluY SINE Alu 1 299 -12 2022 167 29 27 chr10 69752100 69752238 -70564527 - L1 LINE L1 -2042 4104 3968 1925 192 20 157 chr10 69752226 69752410 -70564355 + L1 LINE L1 4513 4720 -1426 * 1504 160 0 8 chr10 69752410 69752660 -70564105 - AluJo SINE Alu -27 285 38 1925 192 20 157 chr10 69752660 69752780 -70563985 + L1 LINE L1 4720 4855 -1291 1895 101 60 0 chr10 69752780 69753075 -70563690 + AluSq SINE Alu 1 311 0 1925 192 20 157 chr10 69753075 69753502 -70563263 + L1 LINE L1 4855 5146 -1000 186 43 0 0 chr10 69753520 69753543 -70563222 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 446 85 387 47 chr10 69753584 69753690 -70563075 - AluJb SINE Alu -169 143 2 1972 135 3 3 chr10 69753722 69754033 -70562732 - AluSx SINE Alu -1 311 1 2017 123 3 0 chr10 69754117 69754417 -70562348 - AluSg SINE Alu -9 301 1 2191 105 0 3 chr10 69755705 69756011 -70560754 - AluSg1 SINE Alu -4 305 1 1737 152 24 0 chr10 69756210 69756500 -70560265 - AluJo SINE Alu -10 302 6 346 184 82 10 chr10 69756506 69756604 -70560161 - L1ME LINE L1 -438 5728 5624 346 206 196 11 chr10 69756609 69756701 -70560064 - L1ME LINE L1 -586 5578 5470 853 173 39 85 chr10 69756710 69756970 -70559795 - AluSg1 SINE Alu -8 301 54 841 166 43 12 chr10 69757274 69757437 -70559328 + FAM SINE Alu 5 172 -3 769 167 7 36 chr10 69757442 69757580 -70559185 + AluJo SINE Alu 2 135 -177 2040 101 7 3 chr10 69757839 69758126 -70558639 + AluSg1 SINE Alu 1 288 -21 2896 97 17 43 chr10 69758258 69758473 -70558292 + L1PA15 LINE L1 5716 5935 -230 1803 146 23 0 chr10 69758473 69758775 -70557990 + AluSx SINE Alu 1 309 -3 2896 97 17 43 chr10 69758775 69759007 -70557758 + L1PA15 LINE L1 5935 6153 -12 198 0 0 0 chr10 69759007 69759029 -70557736 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2896 97 17 43 chr10 69759029 69759042 -70557723 + L1PA15 LINE L1 6153 6165 0 1571 173 20 10 chr10 69759058 69759358 -70557407 + AluJb SINE Alu 1 303 -9 2036 111 13 16 chr10 69759359 69759665 -70557100 + AluSg SINE Alu 1 305 -5 1815 146 29 0 chr10 69759694 69759975 -70556790 + AluJb SINE Alu 3 291 -21 2244 104 3 0 chr10 69759981 69760290 -70556475 + AluSp SINE Alu 1 310 -3 2378 79 0 3 chr10 69760650 69760954 -70555811 + AluY SINE Alu 1 303 -8 862 145 7 28 chr10 69760964 69761109 -70555656 + AluJb SINE Alu 1 142 -170 198 0 0 0 chr10 69761209 69761231 -70555534 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 242 175 0 0 chr10 69761235 69761275 -70555490 + L1M4 LINE L1 5834 5873 -311 346 210 19 0 chr10 69761295 69761374 -70555391 + L1MB7 LINE L1 5837 5923 -261 1715 166 0 7 chr10 69761374 69761670 -70555095 - AluSx SINE Alu -18 294 1 655 187 0 43 chr10 69761906 69762045 -70554720 + FLAM_A SINE Alu 1 133 0 2012 108 21 3 chr10 69762181 69762468 -70554297 - AluSg SINE Alu -18 292 1 2412 55 0 19 chr10 69762807 69763119 -70553646 + AluY SINE Alu 2 307 -4 823 222 24 24 chr10 69763200 69763407 -70553358 - MER3 DNA MER1_type 0 209 3 1928 122 14 3 chr10 69763407 69763702 -70553063 - AluSx SINE Alu -14 298 1 390 188 71 0 chr10 69763913 69763998 -70552767 + FLAM_A SINE Alu 43 133 0 1737 138 19 0 chr10 69764238 69764507 -70552258 + AluSx SINE Alu 1 274 -38 284 123 0 35 chr10 69764509 69764566 -70552199 + Alu SINE Alu 248 302 0 227 293 30 30 chr10 69764901 69765000 -70551765 + MIR SINE MIR 36 134 -128 1017 118 59 12 chr10 69765105 69765275 -70551490 - AluSg SINE Alu -132 178 1 411 279 73 84 chr10 69765294 69765394 -70551371 + L1ME LINE L1 5349 5449 -672 2141 108 0 3 chr10 69765394 69765691 -70551074 - AluSx SINE Alu -16 296 1 411 279 73 84 chr10 69765691 69766025 -70550740 + L1ME LINE L1 5449 5855 -266 1389 209 28 0 chr10 69766338 69766625 -70550140 - AluJo SINE Alu -17 295 1 229 102 0 41 chr10 69766644 69766693 -70550072 - L1MB7 LINE L1 0 6184 6138 5935 132 88 139 chr10 69766706 69767083 -70549682 + Tigger1 DNA MER2_type 2 397 -2021 2056 126 0 3 chr10 69767083 69767384 -70549381 + AluSx SINE Alu 2 301 -11 5935 132 88 139 chr10 69767384 69767396 -70549369 + Tigger1 DNA MER2_type 397 408 -2010 2087 103 10 0 chr10 69767396 69767687 -70549078 + AluSx SINE Alu 4 297 -15 5935 132 88 139 chr10 69767687 69767706 -70549059 + Tigger1 DNA MER2_type 408 426 -1992 1353 201 19 10 chr10 69767706 69768014 -70548751 + AluJb SINE Alu 1 311 -1 5935 132 88 139 chr10 69768014 69768441 -70548324 + Tigger1 DNA MER2_type 426 873 -1545 714 120 0 96 chr10 69768441 69768566 -70548199 + FRAM SINE Alu 45 157 -19 5935 132 88 139 chr10 69768566 69769129 -70547636 + Tigger1 DNA MER2_type 873 1449 -969 961 153 6 12 chr10 69769133 69769303 -70547462 - AluJb SINE Alu -10 302 134 191 59 0 29 chr10 69769304 69769338 -70547427 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1987 86 60 0 chr10 69769338 69769606 -70547159 - AluY SINE Alu -27 284 1 562 121 66 0 chr10 69769654 69769745 -70547020 + AluSg SINE Alu 28 124 -186 773 157 43 0 chr10 69769746 69769886 -70546879 + Tigger1 DNA MER2_type 1652 1797 -621 2227 85 0 3 chr10 69769897 69770190 -70546575 - AluSg SINE Alu -18 292 1 832 190 6 6 chr10 69770193 69770351 -70546414 - FRAM SINE Alu -8 168 11 2161 125 0 0 chr10 69770369 69770681 -70546084 - AluSx SINE Alu 0 312 1 261 222 28 83 chr10 69770933 69771005 -70545760 + MIR SINE MIR 83 150 -58 2155 85 0 0 chr10 69771785 69772066 -70544699 - AluSc SINE Alu -12 297 17 1911 127 7 29 chr10 69772081 69772389 -70544376 - AluSx SINE Alu -11 301 1 818 174 0 0 chr10 69772403 69772541 -70544224 - FLAM_C SINE Alu -4 139 2 2387 63 0 7 chr10 69772782 69773081 -70543684 - AluSc SINE Alu -12 297 1 945 209 6 0 chr10 69773355 69773518 -70543247 - FAM SINE Alu -7 168 5 2146 117 0 0 chr10 69773609 69773907 -70542858 - AluSg SINE Alu -12 298 1 1754 172 0 0 chr10 69774668 69774958 -70541807 - AluJb SINE Alu -22 290 1 2030 109 10 10 chr10 69775723 69776025 -70540740 - AluSc SINE Alu -7 302 1 1909 129 3 7 chr10 69776027 69776322 -70540443 - AluSx SINE Alu -18 294 1 21 71 0 0 chr10 69776661 69776703 -70540062 + AT_rich Low_complexity Low_complexity 1 42 0 2010 107 17 0 chr10 69776866 69777156 -70539609 - AluSg1 SINE Alu -14 295 1 798 158 0 0 chr10 69777878 69778005 -70538760 + AluJb SINE Alu 2 128 -184 2069 98 14 0 chr10 69778072 69778357 -70538408 + AluSq SINE Alu 21 309 -4 1709 144 20 24 chr10 69778441 69778739 -70538026 - AluJb SINE Alu -15 297 1 528 167 9 46 chr10 69778888 69778996 -70537769 + MER5A DNA MER1_type 5 108 -81 527 202 37 28 chr10 69779364 69779473 -70537292 + AluJb SINE Alu 169 278 -34 390 159 31 0 chr10 69779473 69779559 -70537206 - AluJb SINE Alu -69 233 169 843 231 10 36 chr10 69779592 69779731 -70537034 + AluJb SINE Alu 2 135 -177 1808 154 3 33 chr10 69779731 69780036 -70536729 + AluSx SINE Alu 1 296 -16 2072 120 7 7 chr10 69780242 69780543 -70536222 + AluSq SINE Alu 1 301 -12 2290 103 0 0 chr10 69780676 69780967 -70535798 - AluSg SINE Alu -14 296 6 2006 119 0 14 chr10 69781523 69781800 -70534965 - AluSx SINE Alu -39 273 1 1732 174 16 10 chr10 69782124 69782429 -70534336 + AluSx SINE Alu 1 307 -5 26 30 0 0 chr10 69782470 69782503 -70534262 + AT_rich Low_complexity Low_complexity 1 33 0 261 83 0 0 chr10 69782710 69782746 -70534019 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 2187 123 3 0 chr10 69782751 69783051 -70533714 + AluSx SINE Alu 1 301 -11 1181 178 28 9 chr10 69783167 69783381 -70533384 - MER20 DNA MER1_type 0 219 2 21 36 0 0 chr10 69783456 69783484 -70533281 + AT_rich Low_complexity Low_complexity 1 28 0 2436 92 0 0 chr10 69783742 69784045 -70532720 - AluSq SINE Alu -10 303 1 669 175 9 0 chr10 69784839 69784953 -70531812 + AluJb SINE Alu 4 118 -194 225 32 0 0 chr10 69784953 69784984 -70531781 - AluSx SINE Alu -4 304 274 909 83 100 0 chr10 69784987 69785107 -70531658 - AluYa5 SINE Alu -179 132 1 1057 166 15 10 chr10 69785107 69785312 -70531453 + AluJb SINE Alu 103 308 -4 2042 134 7 10 chr10 69785461 69785760 -70531005 - AluSx SINE Alu -14 298 1 284 197 16 16 chr10 69786294 69786355 -70530410 - AluSx SINE Alu -11 290 230 1294 90 24 0 chr10 69786355 69786521 -70530244 - AluSx SINE Alu -142 170 1 608 379 6 130 chr10 69786623 69786977 -70529788 + AluYa5 SINE Alu 2 311 0 2292 92 7 3 chr10 69788036 69788339 -70528426 + AluSc SINE Alu 1 304 -5 998 170 242 81 chr10 69788358 69788545 -70528220 - MER31A LTR ERV1 0 485 329 2002 135 7 3 chr10 69788545 69788849 -70527916 - AluSx SINE Alu -7 305 1 998 170 242 81 chr10 69788849 69789079 -70527686 - MER31A LTR ERV1 -156 329 1 2260 121 0 6 chr10 69789121 69789435 -70527330 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 69789484 69789507 -70527258 + AT_rich Low_complexity Low_complexity 1 23 0 1019 154 0 6 chr10 69789581 69789737 -70527028 - AluJb SINE Alu -35 277 123 216 86 0 0 chr10 69789740 69789775 -70526990 + (T)n Simple_repeat Simple_repeat 1 35 0 1886 146 0 14 chr10 69789799 69790093 -70526672 - AluJb SINE Alu -1 311 22 207 0 0 0 chr10 69790285 69790308 -70526457 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2354 89 0 7 chr10 69791000 69791303 -70525462 - AluSq SINE Alu -12 301 1 2455 86 0 0 chr10 69791312 69791616 -70525149 - AluY SINE Alu -7 304 1 2861 212 82 71 chr10 69791617 69792388 -70524377 + L1MDa LINE L1 339 1101 -5439 1853 166 19 3 chr10 69792388 69792695 -70524070 + AluSx SINE Alu 1 312 0 2861 212 82 71 chr10 69792695 69792752 -70524013 + L1MDa LINE L1 1101 1156 -5384 3755 118 37 66 chr10 69792752 69793406 -70523359 + MER41B LTR ERV1 1 635 0 2861 212 82 71 chr10 69793406 69793458 -70523307 + L1MDa LINE L1 1156 1229 -5311 675 140 0 0 chr10 69793471 69793571 -70523194 + FLAM_A SINE Alu 20 119 -23 1570 117 164 4 chr10 69793595 69793851 -70522914 + AluSx SINE Alu 1 297 -15 2154 127 32 21 chr10 69793852 69794103 -70522662 + MER41B LTR ERV1 204 462 -173 2597 43 0 3 chr10 69794103 69794402 -70522363 + AluY SINE Alu 1 298 -13 2154 127 32 21 chr10 69794402 69794490 -70522275 + MER41B LTR ERV1 462 547 -88 332 198 43 17 chr10 69794492 69794523 -70522242 + L1MDa LINE L1 1245 1274 -5266 1891 147 16 19 chr10 69794523 69794835 -70521930 + AluSx SINE Alu 1 311 -1 332 198 43 17 chr10 69794835 69794919 -70521846 + L1MDa LINE L1 1274 1363 -5177 * 1229 151 56 36 chr10 69794916 69795115 -70521650 + L1MB7 LINE L1 5618 5812 -372 2355 84 3 13 chr10 69795115 69795423 -70521342 + AluSp SINE Alu 1 305 -8 2172 86 14 0 chr10 69795428 69795739 -70521026 + AluSp SINE Alu 1 315 0 1229 151 56 36 chr10 69795739 69795783 -70520982 + L1MB7 LINE L1 5815 5873 -311 344 210 19 0 chr10 69795803 69795882 -70520883 + L1MB7 LINE L1 5837 5923 -261 1829 166 0 7 chr10 69795882 69796178 -70520587 - AluSx SINE Alu -18 294 1 649 187 0 43 chr10 69796414 69796553 -70520212 + FLAM_A SINE Alu 1 133 0 2134 108 21 3 chr10 69796690 69796977 -70519788 - AluSg SINE Alu -18 292 1 2540 58 0 0 chr10 69797316 69797610 -70519155 + AluY SINE Alu 2 295 -16 1411 177 8 0 chr10 69797809 69798052 -70518713 - AluJb SINE Alu -17 295 51 2117 119 0 26 chr10 69798200 69798511 -70518254 + AluSx SINE Alu 1 303 -9 2398 99 0 0 chr10 69798644 69798947 -70517818 - AluSg SINE Alu -7 303 1 982 205 0 0 chr10 69798952 69799118 -70517647 - FRAM SINE Alu 0 166 1 2364 113 0 0 chr10 69799132 69799442 -70517323 - AluSx SINE Alu -2 310 1 229 194 30 90 chr10 69799694 69799761 -70517004 + MIR SINE MIR 83 145 -63 2370 91 0 0 chr10 69800546 69800842 -70515923 - AluSc SINE Alu -13 296 1 2070 128 3 26 chr10 69800842 69801148 -70515617 - AluSx SINE Alu -13 299 1 840 141 0 0 chr10 69801180 69801301 -70515464 - FLAM_C SINE Alu -22 121 1 2526 60 0 7 chr10 69801541 69801839 -70514926 - AluSc SINE Alu -13 296 1 965 203 6 0 chr10 69802113 69802276 -70514489 - FAM SINE Alu -7 168 5 2217 117 0 0 chr10 69802367 69802657 -70514108 - AluSg SINE Alu -20 290 1 1849 176 0 0 chr10 69803418 69803708 -70513057 - AluJb SINE Alu -22 290 1 2211 103 10 10 chr10 69804473 69804775 -70511990 - AluSc SINE Alu -7 302 1 2064 132 0 7 chr10 69804777 69805073 -70511692 - AluSx SINE Alu -18 294 1 21 71 0 0 chr10 69805412 69805454 -70511311 + AT_rich Low_complexity Low_complexity 1 42 0 2141 107 17 0 chr10 69805617 69805908 -70510857 - AluSg1 SINE Alu -13 296 1 821 134 0 0 chr10 69806630 69806749 -70510016 + AluJb SINE Alu 1 119 -193 249 132 0 0 chr10 69806751 69806789 -70509976 - Alu SINE Alu -262 40 3 2262 90 14 0 chr10 69806825 69807114 -70509651 + AluSq SINE Alu 21 313 0 1834 144 20 23 chr10 69807219 69807518 -70509247 - AluJb SINE Alu -14 298 1 480 167 9 46 chr10 69807667 69807775 -70508990 + MER5A DNA MER1_type 5 108 -81 520 202 37 28 chr10 69808143 69808252 -70508513 + AluJb SINE Alu 169 278 -34 383 159 31 0 chr10 69808252 69808338 -70508427 - AluJb SINE Alu -69 233 169 778 179 15 0 chr10 69808371 69808505 -70508260 + AluJb SINE Alu 2 137 -175 1817 151 3 36 chr10 69808510 69808815 -70507950 + AluSx SINE Alu 1 295 -17 2230 113 3 0 chr10 69809021 69809321 -70507444 + AluSq SINE Alu 1 301 -12 2305 100 0 0 chr10 69809454 69809745 -70507020 - AluSg SINE Alu -14 296 6 2006 119 0 14 chr10 69810302 69810579 -70506186 - AluSx SINE Alu -39 273 1 1798 167 16 10 chr10 69810903 69811208 -70505557 + AluSx SINE Alu 1 307 -5 261 83 0 0 chr10 69811489 69811525 -70505240 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 2189 123 3 0 chr10 69811530 69811830 -70504935 + AluSx SINE Alu 1 301 -11 1181 178 28 9 chr10 69811945 69812159 -70504606 - MER20 DNA MER1_type 0 219 2 21 36 0 0 chr10 69812234 69812262 -70504503 + AT_rich Low_complexity Low_complexity 1 28 0 2436 92 0 0 chr10 69812520 69812823 -70503942 - AluSq SINE Alu -10 303 1 202 229 0 0 chr10 69813650 69813698 -70503067 + T-rich Low_complexity Low_complexity 1 48 0 390 261 5 54 chr10 69813747 69813931 -70502834 + CT-rich Low_complexity Low_complexity 3 177 0 1588 199 52 11 chr10 69814279 69814698 -70502067 - MER31-int LTR ERV1 -1022 4101 3498 2484 74 0 0 chr10 69814698 69815048 -70501717 + AluY SINE Alu 1 350 0 1317 186 86 10 chr10 69815051 69815352 -70501413 + L1MB7 LINE L1 5798 6121 -63 2250 113 0 0 chr10 69815352 69815644 -70501121 - AluSp SINE Alu -21 292 1 1726 163 7 27 chr10 69815674 69815968 -70500797 - AluJb SINE Alu -24 288 1 792 217 151 40 chr10 69816038 69816310 -70500455 - HERVL68 LTR ERVL -467 2570 2269 259 79 0 26 chr10 69816354 69816392 -70500373 - MER61A LTR ERV1 0 343 307 232 143 0 0 chr10 69816396 69816431 -70500334 - Alu SINE Alu -265 37 3 284 153 34 17 chr10 69816469 69816528 -70500237 - HERVL68 LTR ERVL -2356 681 622 269 324 25 0 chr10 69816962 69817085 -70499680 - HERVL68 LTR ERVL -2574 463 247 1275 186 53 120 chr10 69817275 69817743 -70499022 + LTR68 LTR ERV1 1 437 -303 1757 120 85 0 chr10 69820233 69820491 -70496274 + AluSg SINE Alu 1 280 -30 2284 106 10 3 chr10 69820515 69820816 -70495949 + AluSx SINE Alu 3 305 -7 1295 97 6 0 chr10 69821150 69821315 -70495450 + AluSp SINE Alu 1 166 -147 2427 165 62 9 chr10 69821315 69821769 -70494996 - MER9 LTR ERVK 0 511 34 3408 215 34 24 chr10 69821776 69823248 -70493517 - HERVK9 LTR ERVK 0 7321 5183 933 199 16 22 chr10 69823261 69823591 -70493174 - HERVK9 LTR ERVK -730 5186 5044 332 148 0 19 chr10 69823583 69823637 -70493128 - HERVK9 LTR ERVK -990 4926 4874 * 3412 60 16 5 chr10 69823661 69824096 -70492669 - HERVK9 LTR ERVK -1698 4218 3779 * 17524 110 14 13 chr10 69824089 69824144 -70492621 - HERVK9 LTR ERVK -2066 3850 3797 2435 73 3 3 chr10 69824144 69824447 -70492318 - AluY SINE Alu -8 303 1 17524 110 14 13 chr10 69824447 69825591 -70491174 - HERVK9 LTR ERVK -2119 3797 2655 2515 73 0 0 chr10 69825591 69825893 -70490872 + AluY SINE Alu 1 302 -9 17524 110 14 13 chr10 69825893 69827161 -70489604 - HERVK9 LTR ERVK -3261 2655 1377 2414 78 3 3 chr10 69827161 69827468 -70489297 - AluY SINE Alu -4 307 1 17524 110 14 13 chr10 69827468 69827499 -70489266 - HERVK9 LTR ERVK -4539 1377 1348 2484 204 22 33 chr10 69827500 69828348 -70488417 - HERVK9 LTR ERVK -5305 611 1 2465 172 57 4 chr10 69828348 69828808 -70487957 - MER9 LTR ERVK 0 511 28 633 101 239 0 chr10 69828809 69828918 -70487847 + AluSp/q SINE Alu 161 295 -18 180 214 214 43 chr10 69829110 69829227 -70487538 - MIR SINE MIR -79 183 47 257 261 57 34 chr10 69829925 69830013 -70486752 + MER103 DNA DNA 10 99 -67 370 296 120 0 chr10 69830116 69830224 -70486541 - MIR3 SINE MIR -48 160 40 29 0 0 0 chr10 69830353 69830382 -70486383 + AT_rich Low_complexity Low_complexity 1 29 0 2777 177 108 21 chr10 69830680 69831255 -70485510 + MLT1E2 LTR MaLR 1 625 -1 2377 105 0 3 chr10 69832556 69832870 -70483895 - AluSq SINE Alu 0 313 1 885 209 6 6 chr10 69833234 69833397 -70483368 - FRAM SINE Alu -3 163 1 242 57 0 29 chr10 69833430 69833465 -70483300 + LTR39 LTR ERV1 1 34 -749 2570 53 0 3 chr10 69833481 69833784 -70482981 - AluY SINE Alu -9 302 1 21 0 0 0 chr10 69833784 69833805 -70482960 + AT_rich Low_complexity Low_complexity 1 21 0 2453 69 20 0 chr10 69833843 69834171 -70482594 - AluSg SINE Alu 0 335 2 207 0 0 0 chr10 69834237 69834260 -70482505 + (T)n Simple_repeat Simple_repeat 1 23 0 2689 154 76 32 chr10 69834307 69834806 -70481959 + LTR39 LTR ERV1 104 624 -159 933 10 0 0 chr10 69834806 69834909 -70481856 + AluYa5/8 SINE Alu 203 305 -5 772 235 6 19 chr10 69834909 69835071 -70481694 + LTR39 LTR ERV1 616 775 -8 342 0 0 0 chr10 69836343 69836381 -70480384 + (TA)n Simple_repeat Simple_repeat 2 39 0 2254 88 7 0 chr10 69836395 69836679 -70480086 - AluSp SINE Alu -27 286 1 309 216 80 80 chr10 69837648 69837773 -70478992 - L1MD2 LINE L1 -2 6357 6233 1033 133 133 0 chr10 69838138 69838318 -70478447 - MER39B LTR ERV1 -447 206 3 306 246 299 15 chr10 69839487 69839621 -70477144 + MER5A DNA MER1_type 11 182 -7 1145 152 36 58 chr10 69840232 69840407 -70476358 + MER20 DNA MER1_type 1 171 -48 518 215 8 66 chr10 69840407 69840528 -70476237 - MER81 DNA DNA 0 114 1 1145 152 36 58 chr10 69840528 69840576 -70476189 + MER20 DNA MER1_type 171 219 0 227 307 104 36 chr10 69840639 69840692 -70476073 + L2 LINE L2 1806 1854 -1460 1330 169 74 27 chr10 69840692 69840988 -70475777 - AluJo SINE Alu 0 312 3 227 307 104 36 chr10 69840988 69841126 -70475639 + L2 LINE L2 1854 2010 -1304 2119 95 0 68 chr10 69841189 69841515 -70475250 - AluSx SINE Alu -8 304 1 189 360 56 0 chr10 69841634 69841723 -70475042 + L2 LINE L2 2252 2345 -969 2232 105 0 3 chr10 69843022 69843317 -70473448 - AluSg SINE Alu -15 295 2 906 172 0 0 chr10 69843419 69843570 -70473195 - FRAM SINE Alu -15 161 11 1137 82 22 82 chr10 69843617 69843800 -70472965 + AluSc SINE Alu 1 172 -137 1859 177 0 3 chr10 69843925 69844236 -70472529 - AluJb SINE Alu -2 310 1 21 36 0 0 chr10 69844242 69844270 -70472495 + AT_rich Low_complexity Low_complexity 1 28 0 898 118 0 0 chr10 69844281 69844400 -70472365 - AluJo SINE Alu -7 305 187 591 160 0 32 chr10 69844401 69844495 -70472270 - AluJo SINE Alu -170 142 52 875 167 0 0 chr10 69844515 69844641 -70472124 - FLAM_C SINE Alu -7 126 1 2337 84 0 0 chr10 69847956 69848243 -70468522 - AluY SINE Alu -24 287 1 2115 112 3 3 chr10 69848582 69848868 -70467897 - AluSg SINE Alu -8 302 17 595 331 17 47 chr10 69849167 69849267 -70467498 + L3 LINE CR1 1277 1378 -199 1767 156 25 3 chr10 69849267 69849549 -70467216 - AluJo SINE Alu -23 289 2 595 331 17 47 chr10 69849549 69849747 -70467018 + L3 LINE CR1 1378 1566 -11 490 308 65 16 chr10 69850119 69850304 -70466461 + MIR SINE MIR 35 228 -34 22 80 0 0 chr10 69850375 69850425 -70466340 + AT_rich Low_complexity Low_complexity 1 50 0 2139 94 38 3 chr10 69850999 69851286 -70465479 - AluSc SINE Alu -12 297 1 964 73 7 44 chr10 69851288 69851424 -70465341 - AluSq/x SINE Alu -180 132 2 2387 104 0 0 chr10 69851441 69851750 -70465015 - AluSq SINE Alu -4 309 1 2587 46 3 3 chr10 69852375 69852682 -70464083 - AluY SINE Alu -4 307 1 2102 106 33 0 chr10 69853191 69853492 -70463273 - AluSp SINE Alu -2 311 1 363 224 56 70 chr10 69855045 69855174 -70461591 + MIR3 SINE MIR 11 143 -86 280 339 83 8 chr10 69856561 69856682 -70460083 - L2 LINE L2 -1 3312 3183 243 88 0 0 chr10 69856717 69856751 -70460014 + (A)n Simple_repeat Simple_repeat 1 34 0 323 280 93 34 chr10 69856809 69856927 -70459838 + L3 LINE CR1 1196 1320 -257 1414 152 37 0 chr10 69856978 69857221 -70459544 - L1MB3 LINE L1 -4 6179 5928 684 200 64 0 chr10 69857649 69857774 -70458991 + AluJo/FLAM SINE Alu 1 133 -169 2433 89 0 13 chr10 69857777 69857912 -70458853 + AluSq SINE Alu 2 137 -166 2249 97 0 35 chr10 69857912 69858045 -70458720 + AluSg SINE Alu 1 137 -173 2234 110 0 10 chr10 69858045 69858345 -70458420 + AluSx SINE Alu 1 297 -15 2249 97 0 35 chr10 69858345 69858521 -70458244 + AluSg SINE Alu 137 299 -11 2433 89 0 13 chr10 69858521 69858688 -70458077 + AluSq SINE Alu 137 300 -3 914 204 6 0 chr10 69858691 69858848 -70457917 + FRAM SINE Alu 1 158 -8 1150 137 6 6 chr10 69859568 69859743 -70457022 - AluSx SINE Alu -137 175 1 21 82 0 0 chr10 69859846 69859895 -70456870 + AT_rich Low_complexity Low_complexity 1 49 0 461 214 61 150 chr10 69860003 69860156 -70456609 + MIR SINE MIR 8 173 -89 2259 108 0 3 chr10 69860156 69860452 -70456313 + AluSx SINE Alu 1 295 -17 461 214 61 150 chr10 69860452 69860479 -70456286 + MIR SINE MIR 173 201 -61 1421 155 126 60 chr10 69860479 69860796 -70455969 - MER46C DNA MER2_type 0 338 1 461 214 61 150 chr10 69860796 69860894 -70455871 + MIR SINE MIR 201 262 0 2078 135 3 3 chr10 69861832 69862143 -70454622 - AluSp SINE Alu -2 311 1 734 279 121 30 chr10 69862451 69862695 -70454070 + L1ME4a LINE L1 5624 5844 -277 2360 95 3 3 chr10 69862695 69863001 -70453764 + AluSq SINE Alu 1 306 -7 734 279 121 30 chr10 69863001 69863159 -70453606 + L1ME4a LINE L1 5844 6072 -49 2015 147 0 16 chr10 69863159 69863472 -70453293 - AluJb SINE Alu -4 308 1 734 279 121 30 chr10 69863472 69863508 -70453257 + L1ME4a LINE L1 6072 6103 -18 955 158 0 0 chr10 69863519 69863652 -70453113 - FLAM_C SINE Alu 0 133 1 25 31 0 0 chr10 69863659 69863691 -70453074 + AT_rich Low_complexity Low_complexity 1 32 0 358 197 16 0 chr10 69864120 69864181 -70452584 + AluJb SINE Alu 1 62 -240 2320 104 3 0 chr10 69864181 69864488 -70452277 - AluSp SINE Alu -5 308 1 1499 149 21 4 chr10 69864488 69864728 -70452037 + AluJb SINE Alu 53 297 -15 1956 138 0 0 chr10 69864921 69865227 -70451538 - AluSg SINE Alu 0 306 1 712 154 0 0 chr10 69866182 69866286 -70450479 - U6 snRNA snRNA -3 104 1 183 42 0 0 chr10 69866720 69866744 -70450021 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1744 164 3 10 chr10 69866747 69867040 -70449725 - AluJo SINE Alu -21 291 1 558 257 94 6 chr10 69867087 69867258 -70449507 + MIR SINE MIR 58 243 -19 * 664 237 49 49 chr10 69867253 69867477 -70449288 - L2 LINE L2 0 3313 3090 22 0 0 0 chr10 69868164 69868186 -70448579 + AT_rich Low_complexity Low_complexity 1 22 0 2248 107 3 0 chr10 69869266 69869564 -70447201 + AluSx SINE Alu 1 299 -13 2539 76 0 0 chr10 69869658 69869962 -70446803 + AluY SINE Alu 1 304 -7 2276 112 0 0 chr10 69869962 69870265 -70446500 + AluSc SINE Alu 1 303 -6 2277 123 0 0 chr10 69870600 69870909 -70445856 + AluSg SINE Alu 1 309 -1 254 156 184 46 chr10 69871092 69871201 -70445564 - L1MC5 LINE L1 -168 7793 7670 1597 112 0 9 chr10 69871219 69871443 -70445322 - AluSq SINE Alu -22 291 70 23 33 0 0 chr10 69871546 69871576 -70445189 + AT_rich Low_complexity Low_complexity 1 30 0 2549 58 0 7 chr10 69871592 69871902 -70444863 - AluY SINE Alu -3 308 1 1324 196 29 29 chr10 69872273 69872554 -70444211 + AluJo SINE Alu 1 281 -31 581 87 0 35 chr10 69872555 69872670 -70444095 + (TAGA)n Simple_repeat Simple_repeat 1 111 0 418 59 0 0 chr10 69874202 69874253 -70442512 + Alu SINE Alu 2 52 -259 28 0 0 0 chr10 69876909 69876937 -70439828 + AT_rich Low_complexity Low_complexity 1 28 0 22 52 0 35 chr10 69877081 69877109 -70439656 + AT_rich Low_complexity Low_complexity 1 28 -28 2084 117 0 3 chr10 69877109 69877400 -70439365 - AluSx SINE Alu -22 290 1 22 52 0 35 chr10 69877400 69877429 -70439336 + AT_rich Low_complexity Low_complexity 28 56 0 1319 83 0 6 chr10 69877557 69877725 -70439040 - AluY SINE Alu -144 167 1 1755 181 7 0 chr10 69877750 69878037 -70438728 - AluSx SINE Alu -23 289 1 559 177 0 10 chr10 69878092 69878188 -70438577 + AluJ/FLAM SINE Alu 2 96 -216 378 0 0 0 chr10 69878188 69878230 -70438535 + (TG)n Simple_repeat Simple_repeat 2 43 0 303 234 0 0 chr10 69878238 69878315 -70438450 + (TA)n Simple_repeat Simple_repeat 1 77 0 230 143 0 0 chr10 69878317 69878359 -70438406 - LTR66 LTR ERVL -171 439 398 1983 117 39 0 chr10 69878374 69878656 -70438109 - AluSx SINE Alu -19 293 1 1688 203 0 3 chr10 69878816 69879107 -70437658 + AluJo SINE Alu 1 290 -22 1418 185 13 61 chr10 69879130 69879443 -70437322 + AluJb SINE Alu 1 298 -14 24 53 0 0 chr10 69879481 69879519 -70437246 + AT_rich Low_complexity Low_complexity 1 38 0 1334 214 12 0 chr10 69879568 69879816 -70436949 - AluJo SINE Alu -61 251 1 836 171 75 0 chr10 69879856 69880002 -70436763 - FRAM SINE Alu -25 151 1 272 295 48 72 chr10 69880090 69880256 -70436509 - L1ME LINE L1 -460 5661 5500 2209 118 13 0 chr10 69880271 69880577 -70436188 + AluSg SINE Alu 1 310 0 27 0 0 0 chr10 69880970 69880997 -70435768 + AT_rich Low_complexity Low_complexity 1 27 0 2307 76 3 3 chr10 69880997 69881288 -70435477 - AluSg SINE Alu -19 291 1 2217 115 3 0 chr10 69881289 69881585 -70435180 - AluSp SINE Alu -16 297 1 517 189 16 55 chr10 69881596 69881723 -70435042 - L1ME1 LINE L1 -5 6161 6040 2443 74 0 3 chr10 69881731 69882043 -70434722 + AluY SINE Alu 1 311 0 349 331 27 0 chr10 69882277 69882425 -70434340 + L1MC4 LINE L1 7383 7534 -508 34 0 0 0 chr10 69882425 69882459 -70434306 + AT_rich Low_complexity Low_complexity 1 34 0 624 212 45 86 chr10 69882490 69882782 -70433983 + L1MC4 LINE L1 7554 7833 -209 2123 102 0 33 chr10 69882793 69883135 -70433630 - AluSc SINE Alu 0 309 1 2177 97 7 0 chr10 69883138 69883426 -70433339 - AluSq SINE Alu -18 295 6 1501 243 94 13 chr10 69883439 69883834 -70432931 - L1MC4 LINE L1 -1037 7005 6579 1001 173 66 15 chr10 69884037 69884234 -70432531 + AluJo SINE Alu 93 299 -13 279 217 50 0 chr10 69885774 69885834 -70430931 - L1MC5 LINE L1 -389 7572 7510 2205 114 3 3 chr10 69885840 69886181 -70430584 - AluSq SINE Alu 0 313 4 2197 99 10 0 chr10 69886213 69886506 -70430259 - AluSp SINE Alu -17 296 1 682 246 32 28 chr10 69886539 69886791 -70429974 - L1MC5 LINE L1 -471 7490 7238 1620 143 96 7 chr10 69886956 69887228 -70429537 - AluSq SINE Alu -17 296 1 1581 159 96 0 chr10 69887230 69887500 -70429265 - AluSx SINE Alu -16 296 1 2104 125 0 3 chr10 69888009 69888306 -70428459 + AluSx SINE Alu 1 296 -16 538 176 10 20 chr10 69888400 69888502 -70428263 + FLAM_C SINE Alu 32 132 -11 1839 150 11 7 chr10 69888668 69888954 -70427811 - AluSg SINE Alu -23 287 1 2297 95 3 0 chr10 69889019 69889315 -70427450 + AluSp SINE Alu 1 297 -16 2382 89 0 0 chr10 69889340 69889643 -70427122 + AluY SINE Alu 1 303 -8 564 301 63 68 chr10 69889708 69890107 -70426658 + L2 LINE L2 2917 3313 0 2094 131 0 0 chr10 69890147 69890444 -70426321 + AluSx SINE Alu 7 303 -9 2475 58 0 3 chr10 69890476 69890770 -70425995 + AluY SINE Alu 1 293 -18 268 338 4 13 chr10 69890970 69891126 -70425639 + GA-rich Low_complexity Low_complexity 4 235 0 1388 170 0 0 chr10 69891258 69891481 -70425284 + AluY SINE Alu 77 299 -12 622 140 0 40 chr10 69891547 69891647 -70425118 - AluSg/x SINE Alu -12 297 202 1232 200 7 54 chr10 69891764 69891939 -70424826 - AluJb SINE Alu -14 298 141 2341 79 10 0 chr10 69891939 69892242 -70424523 - AluSp SINE Alu -7 306 1 1232 200 7 54 chr10 69892242 69892361 -70424404 - AluJb SINE Alu -171 141 18 1943 122 31 3 chr10 69892405 69892693 -70424072 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr10 69892933 69892954 -70423811 + AT_rich Low_complexity Low_complexity 1 21 0 1854 116 25 44 chr10 69893547 69893865 -70422900 - AluSx SINE Alu 0 312 1 1826 177 0 0 chr10 69893891 69894190 -70422575 + AluJb SINE Alu 5 303 -9 981 170 6 0 chr10 69894297 69894456 -70422309 + AluSg/x SINE Alu 134 293 -17 208 98 24 24 chr10 69894469 69894510 -70422255 + (TAA)n Simple_repeat Simple_repeat 1 41 0 684 185 0 8 chr10 69894516 69894635 -70422130 + FLAM_C SINE Alu 3 120 -13 2017 128 3 13 chr10 69895066 69895364 -70421401 + AluSx SINE Alu 1 295 -17 1381 195 0 53 chr10 69895396 69895573 -70421192 - AluJb SINE Alu -14 298 142 2386 79 7 0 chr10 69895573 69895877 -70420888 - AluSp SINE Alu -7 306 1 1381 195 0 53 chr10 69895877 69896002 -70420763 - AluJb SINE Alu -170 142 12 1988 121 28 3 chr10 69896041 69896330 -70420435 + AluSx SINE Alu 1 296 -16 884 121 40 50 chr10 69896475 69896674 -70420091 - AluSp SINE Alu -116 197 1 724 216 0 0 chr10 69896674 69896799 -70419966 - AluJo SINE Alu -176 136 12 1988 121 28 3 chr10 69896838 69897127 -70419638 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr10 69897367 69897388 -70419377 + AT_rich Low_complexity Low_complexity 1 21 0 2248 103 0 31 chr10 69897980 69898164 -70418601 - AluSc SINE Alu 0 309 138 2295 114 7 0 chr10 69898164 69898472 -70418293 - AluSx SINE Alu -2 310 1 2248 103 0 31 chr10 69898472 69898606 -70418159 - AluSc SINE Alu -171 138 1 1780 235 30 77 chr10 69898628 69898712 -70418053 + L2 LINE L2 2170 2256 -1058 1554 163 20 30 chr10 69898712 69898754 -70418011 - AluJo SINE Alu -2 310 269 2228 104 0 7 chr10 69898754 69899052 -70417713 + AluSq SINE Alu 1 296 -17 1554 163 20 30 chr10 69899052 69899310 -70417455 - AluJo SINE Alu -43 269 13 1780 235 30 77 chr10 69899310 69899864 -70416901 + L2 LINE L2 2256 2778 -536 2160 117 0 10 chr10 69899871 69900169 -70416596 + AluSx SINE Alu 1 295 -17 1428 160 4 4 chr10 69900180 69900411 -70416354 + AluJb SINE Alu 59 289 -23 2203 114 10 0 chr10 69900411 69900708 -70416057 + AluSg SINE Alu 1 300 -10 548 296 37 69 chr10 69900711 69901204 -70415561 + L2 LINE L2 2780 3303 -10 2072 100 31 7 chr10 69901325 69901616 -70415149 - AluSg SINE Alu -12 298 1 311 250 73 118 chr10 69901635 69901735 -70415030 + L1ME LINE L1 5349 5452 -669 2239 108 0 3 chr10 69901735 69902031 -70414734 - AluSx SINE Alu -17 295 1 311 250 73 118 chr10 69902031 69902202 -70414563 + L1ME LINE L1 5452 5608 -513 1482 209 28 0 chr10 69902678 69902965 -70413800 - AluJo SINE Alu -17 295 1 242 102 0 41 chr10 69902984 69903033 -70413732 - L1MB7 LINE L1 0 6184 6138 5987 130 91 142 chr10 69903046 69903423 -70413342 + Tigger1 DNA MER2_type 2 397 -2021 2132 133 0 3 chr10 69903423 69903724 -70413041 + AluSx SINE Alu 2 301 -11 5987 130 91 142 chr10 69903724 69903736 -70413029 + Tigger1 DNA MER2_type 397 408 -2010 2188 103 10 0 chr10 69903736 69904027 -70412738 + AluSx SINE Alu 4 297 -15 5987 130 91 142 chr10 69904027 69904046 -70412719 + Tigger1 DNA MER2_type 408 426 -1992 1428 181 29 29 chr10 69904046 69904355 -70412410 + AluJb SINE Alu 1 309 -3 5987 130 91 142 chr10 69904355 69904782 -70411983 + Tigger1 DNA MER2_type 426 873 -1545 757 120 0 96 chr10 69904782 69904907 -70411858 + FRAM SINE Alu 45 157 -19 5987 130 91 142 chr10 69904907 69905470 -70411295 + Tigger1 DNA MER2_type 873 1449 -969 1055 155 6 6 chr10 69905474 69905642 -70411123 - AluJb SINE Alu -11 301 134 191 59 0 29 chr10 69905643 69905677 -70411088 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2084 86 60 0 chr10 69905677 69905945 -70410820 - AluY SINE Alu -27 284 1 597 121 66 0 chr10 69905993 69906084 -70410681 + AluSg SINE Alu 28 124 -186 1805 122 37 90 chr10 69906085 69906236 -70410529 + Tigger1 DNA MER2_type 1652 1809 -609 2373 51 10 17 chr10 69906236 69906530 -70410235 - AluY SINE Alu -19 292 1 1805 122 37 90 chr10 69906530 69906693 -70410072 + Tigger1 DNA MER2_type 1809 1945 -473 2006 131 10 0 chr10 69906693 69906984 -70409781 - AluSx SINE Alu -17 295 2 1805 122 37 90 chr10 69906984 69907044 -70409721 + Tigger1 DNA MER2_type 1945 2007 -411 908 210 10 15 chr10 69907044 69907239 -70409526 - AluJo SINE Alu -33 279 86 1156 145 62 76 chr10 69907239 69907388 -70409377 + Tigger1 DNA MER2_type 2147 2297 -121 2540 60 0 0 chr10 69907388 69907689 -70409076 - AluY SINE Alu -10 301 1 1819 181 0 3 chr10 69907696 69907994 -70408771 - AluJb SINE Alu -15 297 1 1156 145 62 76 chr10 69907994 69908112 -70408653 + Tigger1 DNA MER2_type 2303 2418 0 1319 180 39 39 chr10 69908112 69908396 -70408369 - L1MB8 LINE L1 -58 6120 5837 653 193 164 14 chr10 69908413 69908553 -70408212 - FRAM SINE Alu -2 164 4 2211 121 0 0 chr10 69909275 69909573 -70407192 + AluSx SINE Alu 1 298 -14 575 256 83 20 chr10 69909689 69909943 -70406822 - L1MC4a LINE L1 -1878 5930 5661 2144 121 3 0 chr10 69910026 69910316 -70406449 + AluSq SINE Alu 1 291 -22 222 277 0 31 chr10 69910848 69910913 -70405852 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 454 239 23 29 chr10 69910934 69910953 -70405812 - L1MC5 LINE L1 -864 6921 6903 1912 137 45 0 chr10 69910953 69911245 -70405520 - AluSx SINE Alu -7 305 1 454 239 23 29 chr10 69911245 69911290 -70405475 - L1MC5 LINE L1 -882 6903 6859 2598 49 0 13 chr10 69911290 69911597 -70405168 - AluY SINE Alu -8 303 1 454 239 23 29 chr10 69911597 69911685 -70405080 - L1MC5 LINE L1 -926 6859 6739 27 49 0 0 chr10 69912159 69912200 -70404565 + AT_rich Low_complexity Low_complexity 1 41 0 1144 89 7 0 chr10 69912280 69912426 -70404339 + AluY SINE Alu 1 147 -164 1686 92 4 13 chr10 69912426 69912653 -70404112 + AluY SINE Alu 72 296 -15 2139 64 89 4 chr10 69913185 69913465 -70403300 + AluY SINE Alu 1 304 -7 1413 155 0 0 chr10 69917450 69917663 -70399102 - AluSx SINE Alu -99 213 1 2353 82 3 0 chr10 69917691 69917984 -70398781 - AluSq SINE Alu -19 294 1 1314 148 39 51 chr10 69918019 69918189 -70398576 - L1MB5 LINE L1 0 6174 6006 2158 104 34 0 chr10 69918189 69918487 -70398278 - AluSq SINE Alu -5 308 1 1314 148 39 51 chr10 69918487 69918572 -70398193 - L1MB5 LINE L1 -168 6006 5922 2056 102 33 143 chr10 69918572 69918963 -70397802 + Tigger3(Golem) DNA MER2_type 1 3028 -1 516 138 0 1 chr10 69918963 69919051 -70397714 - L1MB7 LINE L1 -261 5923 5837 * 1467 194 54 28 chr10 69919050 69919441 -70397324 - L1ME2 LINE L1 -22 6142 5742 23 0 0 0 chr10 69919535 69919558 -70397207 + AT_rich Low_complexity Low_complexity 1 23 0 1719 172 7 20 chr10 69919923 69920226 -70396539 - AluJb SINE Alu -13 299 1 23 0 0 0 chr10 69920353 69920376 -70396389 + AT_rich Low_complexity Low_complexity 1 23 0 2133 117 6 22 chr10 69920424 69920741 -70396024 + AluSx SINE Alu 1 312 0 1252 216 220 33 chr10 69920746 69921252 -70395513 - L1MC5 LINE L1 -45 7916 7279 180 0 0 0 chr10 69921252 69921272 -70395493 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1252 216 220 33 chr10 69921272 69921366 -70395399 - L1MC5 LINE L1 -682 7279 7204 618 290 135 48 chr10 69921352 69921856 -70394909 - HAL1b LINE L1 -643 705 158 * 578 236 0 0 chr10 69921944 69922050 -70394715 - FAM SINE Alu -9 176 71 1109 87 7 27 chr10 69922184 69922334 -70394431 - AluSg SINE Alu -163 147 1 189 0 0 0 chr10 69922353 69922374 -70394391 + (A)n Simple_repeat Simple_repeat 1 21 0 205 67 67 17 chr10 69922421 69922458 -70394307 + (TA)n Simple_repeat Simple_repeat 2 45 -19 1641 176 31 0 chr10 69922458 69922747 -70394018 - AluJb SINE Alu -14 298 1 205 67 67 17 chr10 69922747 69922769 -70393996 + (TA)n Simple_repeat Simple_repeat 45 64 0 2043 141 0 10 chr10 69922773 69923085 -70393680 - AluSx SINE Alu -3 309 1 2072 106 0 67 chr10 69923179 69923510 -70393255 - AluSx SINE Alu 0 312 4 1083 170 6 6 chr10 69923516 69923687 -70393078 - FAM SINE Alu -4 171 1 228 150 0 0 chr10 69923875 69923915 -70392850 + L1MB8 LINE L1 6139 6178 0 2357 99 0 19 chr10 69924337 69924651 -70392114 - AluSp SINE Alu -5 308 1 1662 153 4 39 chr10 69924850 69924973 -70391792 + AluJo SINE Alu 18 144 -168 1952 142 3 3 chr10 69924973 69925268 -70391497 + AluSx SINE Alu 1 295 -17 1662 153 4 39 chr10 69925268 69925425 -70391340 + AluJo SINE Alu 144 288 -24 198 0 0 0 chr10 69925428 69925450 -70391315 + (TAAAA)n Simple_repeat Simple_repeat 3 24 0 478 170 200 10 chr10 69925867 69925967 -70390798 + FLAM_A SINE Alu 1 119 -14 318 67 0 0 chr10 69926005 69926050 -70390715 + (CA)n Simple_repeat Simple_repeat 1 45 0 1897 144 4 0 chr10 69926160 69926438 -70390327 - AluJb SINE Alu -18 294 16 381 211 42 0 chr10 69926716 69926787 -70389978 + MIR SINE MIR 8 81 -181 203 154 51 0 chr10 69926796 69926835 -70389930 + (CATA)n Simple_repeat Simple_repeat 3 43 0 22 0 0 0 chr10 69926889 69926911 -70389854 + AT_rich Low_complexity Low_complexity 1 22 0 623 189 0 0 chr10 69926911 69927006 -70389759 + AluJ/FLAM SINE Alu 2 96 -216 832 232 6 18 chr10 69927117 69927285 -70389480 + FRAM SINE Alu 1 166 0 1319 207 4 4 chr10 69927314 69927575 -70389190 + AluJo SINE Alu 40 300 -12 892 150 0 0 chr10 69927630 69927750 -70389015 + FLAM_C SINE Alu 1 120 -23 21 36 0 0 chr10 69927750 69927778 -70388987 + AT_rich Low_complexity Low_complexity 1 28 0 2126 120 10 0 chr10 69928180 69928488 -70388277 - AluSx SINE Alu -1 311 1 827 109 4 61 chr10 69928495 69928654 -70388111 + (TTCC)n Simple_repeat Simple_repeat 1 167 -638 2137 132 0 6 chr10 69928654 69928965 -70387800 - AluSc SINE Alu 0 309 1 2266 98 0 19 chr10 69928967 69929274 -70387491 - AluSx SINE Alu -11 301 1 827 109 4 61 chr10 69929274 69929348 -70387417 + (TTCC)n Simple_repeat Simple_repeat 168 805 0 2311 114 7 0 chr10 69929351 69929659 -70387106 - AluSq SINE Alu -3 310 1 192 372 0 12 chr10 69929676 69929762 -70387003 + L2 LINE L2 2430 2514 -800 1470 171 20 34 chr10 69929894 69930187 -70386578 - AluJo SINE Alu -17 295 7 383 304 30 130 chr10 69930213 69930483 -70386282 + L2 LINE L2 2978 3220 -52 302 174 29 29 chr10 69930554 69930623 -70386142 - AluJ/FRAM SINE Alu -2 300 232 294 29 0 0 chr10 69930634 69930669 -70386096 + (TA)n Simple_repeat Simple_repeat 1 35 0 2012 94 62 0 chr10 69930690 69930966 -70385799 - AluSq SINE Alu -20 293 1 237 133 22 0 chr10 69931078 69931123 -70385642 - Alu SINE Alu -256 46 1 2161 132 0 0 chr10 69931670 69931958 -70384807 - AluSx SINE Alu -24 288 1 657 263 72 82 chr10 69932089 69932458 -70384307 + L1ME4a LINE L1 5355 5717 -404 2305 113 0 3 chr10 69932458 69932768 -70383997 - AluSq SINE Alu -4 309 1 657 263 72 82 chr10 69932768 69933011 -70383754 + L1ME4a LINE L1 5717 5961 -160 2256 88 0 3 chr10 69933050 69933333 -70383432 + AluSq SINE Alu 1 282 -31 288 98 0 39 chr10 69933433 69933484 -70383281 + AluSp/q SINE Alu 249 297 -6 25 31 0 0 chr10 69934239 69934271 -70382494 + AT_rich Low_complexity Low_complexity 1 32 0 2272 119 0 0 chr10 69935087 69935398 -70381367 + AluSx SINE Alu 1 311 -1 2368 90 0 7 chr10 69935749 69936050 -70380715 + AluY SINE Alu 10 308 -3 315 0 0 0 chr10 69936050 69936085 -70380680 + (TA)n Simple_repeat Simple_repeat 2 36 0 1984 145 0 7 chr10 69936091 69936387 -70380378 + AluJb SINE Alu 1 294 -18 526 279 79 41 chr10 69936813 69936943 -70379822 - L1MC4 LINE L1 -17 8025 7901 899 131 30 56 chr10 69936943 69937119 -70379646 - L1MA5A LINE L1 -13 6284 6112 2343 103 0 0 chr10 69937119 69937420 -70379345 - AluSx SINE Alu -11 301 1 899 131 30 56 chr10 69937420 69937441 -70379324 - L1MA5A LINE L1 -185 6112 6092 526 279 79 41 chr10 69937441 69937626 -70379139 - L1MC4 LINE L1 -141 7901 7698 470 243 55 130 chr10 69938284 69938781 -70377984 - L1MC5 LINE L1 -350 7674 7249 284 254 17 0 chr10 69938852 69938911 -70377854 - L3 LINE CR1 -20 1557 1498 2126 104 24 0 chr10 69939034 69939321 -70377444 + AluSc SINE Alu 12 305 -4 2292 99 3 0 chr10 69939666 69939958 -70376807 - AluSp SINE Alu -20 293 1 2222 117 7 3 chr10 69939963 69940271 -70376494 - AluSx SINE Alu -3 309 1 297 128 0 0 chr10 69940437 69940484 -70376281 + (CA)n Simple_repeat Simple_repeat 2 48 0 2229 104 0 3 chr10 69940490 69940778 -70375987 - AluSq SINE Alu -26 287 1 232 250 10 42 chr10 69940872 69940968 -70375797 - L1ME LINE L1 -202 5919 5827 1684 135 28 83 chr10 69941004 69941329 -70375436 - AluJb SINE Alu -5 307 1 1584 182 43 0 chr10 69941367 69941647 -70375118 - AluJb SINE Alu -20 292 1 314 29 0 0 chr10 69941673 69941708 -70375057 + U2 snRNA snRNA 1 35 -153 587 198 60 0 chr10 69941714 69941830 -70374935 - FLAM_C SINE Alu -18 125 3 2176 116 7 0 chr10 69941936 69942238 -70374527 - AluSx SINE Alu -8 304 1 975 98 0 182 chr10 69942250 69942475 -70374290 - AluSx SINE Alu -117 195 12 574 204 31 58 chr10 69942485 69942541 -70374224 - L1ME LINE L1 -302 5819 5763 1407 201 30 27 chr10 69942541 69942839 -70373926 - AluJo SINE Alu -13 299 1 574 204 31 58 chr10 69942839 69942973 -70373792 - L1ME LINE L1 -358 5763 5634 2413 94 0 3 chr10 69943021 69943328 -70373437 - AluSx SINE Alu -6 306 1 288 345 43 0 chr10 69943600 69943716 -70373049 - L2 LINE L2 -24 3289 3169 1588 110 0 5 chr10 69943898 69944116 -70372649 + AluSg SINE Alu 1 217 -93 1079 135 10 45 chr10 69944270 69944470 -70372295 - AluJb SINE Alu -119 193 1 283 283 228 30 chr10 69944481 69944714 -70372051 - L3 LINE CR1 -361 1216 938 28 0 0 0 chr10 69945222 69945250 -70371515 + AT_rich Low_complexity Low_complexity 1 28 0 1117 160 4 80 chr10 69945290 69945375 -70371390 - AluJo SINE Alu -92 220 130 2251 93 0 7 chr10 69945375 69945688 -70371077 - AluSq SINE Alu 0 313 5 1117 160 4 80 chr10 69945688 69945839 -70370926 - AluJo SINE Alu -182 130 2 1930 144 0 23 chr10 69946367 69946673 -70370092 - AluJo SINE Alu -13 299 1 277 203 58 65 chr10 69947021 69947159 -70369606 - L1MC5 LINE L1 -214 7747 7611 1500 137 25 121 chr10 69947162 69947484 -70369281 - AluSx SINE Alu -21 291 1 771 196 42 28 chr10 69947484 69947627 -70369138 - AluJo SINE Alu -165 147 3 1028 205 137 49 chr10 69947672 69948058 -70368707 - L1MC5 LINE L1 -73 7888 7469 2383 84 0 0 chr10 69948300 69948598 -70368167 - AluSc SINE Alu -11 298 1 729 158 108 8 chr10 69948602 69948722 -70368043 - FLAM_C SINE Alu -10 133 2 452 254 71 42 chr10 69948731 69948971 -70367794 - L1ME LINE L1 -299 5822 5576 2295 94 7 3 chr10 69949063 69949360 -70367405 - AluSx SINE Alu -14 298 1 23 33 0 0 chr10 69949688 69949718 -70367047 + AT_rich Low_complexity Low_complexity 1 30 0 2236 124 0 0 chr10 69950662 69950961 -70365804 + AluSx SINE Alu 1 299 -13 644 321 85 38 chr10 69951175 69951869 -70364896 - L2 LINE L2 0 3272 2551 426 223 36 65 chr10 69951849 69951988 -70364777 - MIR SINE MIR -121 141 7 * 2208 100 0 10 chr10 69952032 69952332 -70364433 - AluY SINE Alu -14 297 1 884 209 0 0 chr10 69952539 69952697 -70364068 - AluJb SINE Alu -18 294 137 381 305 84 46 chr10 69952717 69953084 -70363681 - L2 LINE L2 -905 2409 2029 2046 100 0 72 chr10 69953505 69953825 -70362940 + AluSx SINE Alu 1 297 -15 1532 188 0 21 chr10 69953829 69954111 -70362654 - AluJo SINE Alu -24 288 13 600 171 162 0 chr10 69954133 69954244 -70362521 - FLAM_A SINE Alu -4 129 1 277 346 79 0 chr10 69954367 69954569 -70362196 - L2 LINE L2 -2156 1158 941 293 295 117 39 chr10 69954790 69955071 -70361694 - L2 LINE L2 -2716 598 296 218 333 130 65 chr10 69955209 69955440 -70361325 - L2 LINE L2 -9 3263 3018 378 229 74 69 chr10 69956157 69956184 -70360581 - L1ME4a LINE L1 0 6121 6096 2143 119 3 0 chr10 69956184 69956477 -70360288 + AluSx SINE Alu 1 294 -18 378 229 74 69 chr10 69956477 69956624 -70360141 - L1ME4a LINE L1 -25 6096 5946 1190 153 0 0 chr10 69956749 69956925 -70359840 - AluSg/x SINE Alu -1 309 134 274 296 92 0 chr10 69957458 69957556 -70359209 - L2 LINE L2 -3 3310 3204 2427 83 0 0 chr10 69957621 69957922 -70358843 + AluSx SINE Alu 1 301 -11 2413 65 7 0 chr10 69958003 69958296 -70358469 + AluY SINE Alu 1 295 -16 339 250 109 26 chr10 69958407 69958563 -70358202 - MIR SINE MIR -14 248 80 1938 123 3 46 chr10 69958564 69958866 -70357899 + AluJb SINE Alu 1 289 -23 1932 117 31 14 chr10 69958879 69959169 -70357596 + AluSx SINE Alu 1 295 -17 186 136 34 17 chr10 69959227 69959286 -70357479 + (TA)n Simple_repeat Simple_repeat 1 60 0 823 150 0 23 chr10 69959318 69959451 -70357314 + AluSg/x SINE Alu 154 283 -27 2487 54 0 3 chr10 69960629 69960924 -70355841 + AluSg SINE Alu 1 294 -16 236 292 281 24 chr10 69961424 69961712 -70355053 + L3 LINE CR1 1008 1369 -208 23 0 0 0 chr10 69961888 69961911 -70354854 + AT_rich Low_complexity Low_complexity 1 23 0 252 157 0 0 chr10 69961983 69962034 -70354731 - AluSp/q SINE Alu 0 303 253 824 104 0 0 chr10 69962036 69962142 -70354623 - AluSp SINE Alu -207 106 1 1595 174 13 58 chr10 69962143 69962314 -70354451 - AluJo SINE Alu -16 296 144 2118 103 7 3 chr10 69962314 69962605 -70354160 - AluY SINE Alu -19 292 1 1595 174 13 58 chr10 69962605 69962743 -70354022 - AluJo SINE Alu -168 144 1 507 211 0 0 chr10 69962808 69962898 -70353867 + FRAM SINE Alu 73 162 -14 1895 139 17 0 chr10 69963084 69963372 -70353393 + AluSx SINE Alu 1 293 -19 2199 122 0 3 chr10 69964326 69964630 -70352135 - AluSx SINE Alu -8 304 2 25 0 0 0 chr10 69964640 69964665 -70352100 + AT_rich Low_complexity Low_complexity 1 25 0 799 169 0 0 chr10 69964978 69965102 -70351663 - FLAM_A SINE Alu -9 124 1 1395 180 0 9 chr10 69966259 69966492 -70350273 + AluJo SINE Alu 60 290 -22 983 154 0 19 chr10 69966848 69967004 -70349761 + FRAM SINE Alu 1 152 -24 25 0 0 0 chr10 69967489 69967514 -70349251 + AT_rich Low_complexity Low_complexity 1 25 0 2441 63 3 0 chr10 69967695 69967994 -70348771 + AluY SINE Alu 9 308 -3 1071 101 13 0 chr10 69968252 69968401 -70348364 - AluSg SINE Alu -159 151 1 2229 115 0 6 chr10 69968455 69968767 -70347998 - AluSg SINE Alu 0 310 1 1362 150 24 0 chr10 69969282 69969495 -70347270 - AluSq SINE Alu -95 218 1 1607 143 86 14 chr10 69969921 69970201 -70346564 - AluJb SINE Alu -12 300 1 1510 184 65 4 chr10 69970201 69970479 -70346286 - AluJo SINE Alu -17 295 1 439 285 58 7 chr10 69970483 69970620 -70346145 - L1ME LINE L1 -458 5663 5520 2458 81 0 0 chr10 69971307 69971604 -70345161 - AluSc SINE Alu -12 297 1 985 154 40 84 chr10 69972512 69972674 -70344091 - AluSg/x SINE Alu -10 300 149 2144 134 0 0 chr10 69972674 69972979 -70343786 - AluSx SINE Alu -7 305 1 985 154 40 84 chr10 69972979 69973043 -70343722 - AluSg/x SINE Alu -161 149 84 529 184 39 0 chr10 69973141 69973244 -70343521 - L1MB7 LINE L1 -17 6167 6061 1041 96 90 18 chr10 69973252 69973419 -70343346 - L1PA11 LINE L1 0 6174 5996 21 0 0 0 chr10 69973419 69973440 -70343325 + AT_rich Low_complexity Low_complexity 1 21 0 611 195 119 0 chr10 69973440 69973558 -70343207 - FLAM_C SINE Alu -10 133 2 606 183 80 133 chr10 69974729 69974932 -70341833 + MER33 DNA MER1_type 13 196 -2389 2046 128 0 33 chr10 69974932 69975236 -70341529 + AluSx SINE Alu 4 297 -15 606 183 80 133 chr10 69975236 69975333 -70341432 + MER33 DNA MER1_type 196 297 -27 310 184 92 58 chr10 69976071 69976158 -70340607 + MLT1F1 LTR MaLR 45 134 -433 1100 206 344 7 chr10 69976160 69976587 -70340178 + L1MC3 LINE L1 7209 7779 -6 887 127 8 30 chr10 69976859 69976993 -70339772 - FLAM_C SINE Alu -2 131 1 1481 167 98 29 chr10 69977682 69977793 -70338972 + AluJb SINE Alu 1 103 -209 2216 114 3 3 chr10 69977793 69978100 -70338665 + AluSp SINE Alu 1 307 -6 1481 167 98 29 chr10 69978100 69978263 -70338502 + AluJb SINE Alu 103 294 -18 194 170 0 21 chr10 69978263 69978310 -70338455 + GA-rich Low_complexity Low_complexity 2 47 0 2429 71 0 7 chr10 69978318 69978615 -70338150 - AluY SINE Alu -16 295 1 585 170 259 30 chr10 69978968 69979103 -70337662 - FRAM SINE Alu 0 166 1 227 167 0 0 chr10 69979134 69979176 -70337589 - L1ME4a LINE L1 -2 6119 6078 266 252 181 19 chr10 69979194 69979349 -70337416 - L1ME LINE L1 -297 5824 5645 1675 153 10 49 chr10 69979854 69980162 -70336603 + AluJo SINE Alu 1 296 -16 762 177 26 71 chr10 69980200 69980426 -70336339 + L1MB7 LINE L1 5943 6158 -26 1032 173 39 0 chr10 69980535 69980714 -70336051 - L1MD2 LINE L1 -6 6353 6168 324 294 81 6 chr10 69981100 69981260 -70335505 + L2 LINE L2 2153 2324 -990 770 196 103 11 chr10 69981421 69981725 -70335040 - Charlie1 DNA MER1_type 0 2761 19 2305 92 3 0 chr10 69981987 69982279 -70334486 + AluSp SINE Alu 1 293 -20 1030 207 244 29 chr10 69982753 69982999 -70333766 + AluJo SINE Alu 1 299 -3 440 295 43 7 chr10 69983143 69983282 -70333483 + MIR SINE MIR 8 151 -111 291 54 0 0 chr10 69983880 69983917 -70332848 + (TG)n Simple_repeat Simple_repeat 2 38 0 2023 93 29 7 chr10 69983917 69984196 -70332569 - AluSx SINE Alu -27 285 1 195 42 0 0 chr10 69985727 69985751 -70331014 + (A)n Simple_repeat Simple_repeat 1 24 0 26 0 0 0 chr10 69987135 69987161 -70329604 + AT_rich Low_complexity Low_complexity 1 26 0 392 297 91 6 chr10 69987326 69987501 -70329264 - L1ME LINE L1 -301 5820 5631 1314 196 4 0 chr10 69987501 69987726 -70329039 - AluJo SINE Alu -86 226 1 963 217 0 0 chr10 69987821 69987982 -70328783 - AluJo SINE Alu -5 297 137 1351 80 0 0 chr10 69988011 69988174 -70328591 + AluY SINE Alu 128 290 -21 269 133 0 22 chr10 69988176 69988221 -70328544 - AluJo SINE Alu -175 127 84 295 211 84 0 chr10 69988226 69988297 -70328468 + L2 LINE L2 3221 3297 -16 1847 148 3 41 chr10 69988312 69988630 -70328135 - AluJo SINE Alu -6 306 1 190 286 214 12 chr10 69988644 69988728 -70328037 - L2 LINE L2 -633 2681 2581 1818 108 111 38 chr10 69988810 69989098 -70327667 + AluSx SINE Alu 1 309 -3 587 135 167 0 chr10 69989119 69989215 -70327550 + FLAM_C SINE Alu 25 136 -7 453 256 94 30 chr10 69989295 69989498 -70327267 - L2 LINE L2 -924 2390 2175 305 270 129 43 chr10 69989549 69989712 -70327053 - MIR SINE MIR -66 196 20 1315 51 0 6 chr10 69989997 69990155 -70326610 - L1PA8 LINE L1 0 6172 6016 945 151 101 46 chr10 69990183 69990401 -70326364 - AluJo SINE Alu -82 230 1 1742 174 3 7 chr10 69991717 69992027 -70324738 - AluJo SINE Alu -3 309 1 1363 161 70 35 chr10 69992276 69992394 -70324371 + AluJo SINE Alu 1 113 -199 207 0 0 0 chr10 69992394 69992417 -70324348 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1363 161 70 35 chr10 69992417 69992583 -70324182 + AluJo SINE Alu 113 295 -17 867 129 0 0 chr10 69992737 69992861 -70323904 + AluJb SINE Alu 180 303 -9 29 28 0 0 chr10 69992924 69992960 -70323805 + AT_rich Low_complexity Low_complexity 1 36 0 853 179 7 40 chr10 69993018 69993169 -70323596 + AluJb SINE Alu 2 147 -165 1723 189 3 3 chr10 69994016 69994322 -70322443 - AluJb SINE Alu -6 306 1 823 144 0 65 chr10 69995629 69995782 -70320983 - FLAM_C SINE Alu 0 143 1 1079 164 18 0 chr10 69996057 69996228 -70320537 + AluJb SINE Alu 123 296 -16 275 280 10 20 chr10 69996263 69996363 -70320402 + (TA)n Simple_repeat Simple_repeat 1 99 0 790 182 13 25 chr10 69996707 69996866 -70319899 - L1MA10 LINE L1 -9 6325 6169 728 160 0 0 chr10 69996935 69997041 -70319724 - FLAM_A SINE Alu -12 130 25 1743 143 64 4 chr10 69997049 69997329 -70319436 - AluJb SINE Alu -15 297 1 271 157 14 57 chr10 69997333 69997403 -70319362 - L1ME2 LINE L1 -229 5935 5869 1194 220 131 0 chr10 69997413 69997749 -70319016 - L1M4 LINE L1 -2231 3915 3536 2205 119 0 0 chr10 69997904 69998198 -70318567 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr10 69998282 69998303 -70318462 + AT_rich Low_complexity Low_complexity 1 21 0 2177 107 14 0 chr10 69998307 69998597 -70318168 + AluSq SINE Alu 1 294 -19 2355 105 0 0 chr10 69998599 69998904 -70317861 + AluSx SINE Alu 1 305 -7 791 129 89 32 chr10 69998910 69999034 -70317731 + FLAM_C SINE Alu 1 131 -2 1449 163 110 83 chr10 69999307 69999670 -70317095 + MSTA LTR MaLR 1 426 -2 984 99 141 0 chr10 69999996 70000138 -70316627 + MSTA LTR MaLR 267 428 0 757 122 0 0 chr10 70000180 70000278 -70316487 - AluSg SINE Alu -211 99 2 1258 190 62 68 chr10 70000291 70000644 -70316121 - Charlie4a DNA MER1_type -157 351 1 278 146 0 18 chr10 70000756 70000800 -70315965 + (TA)n Simple_repeat Simple_repeat 1 45 -9 2353 94 0 16 chr10 70000800 70001109 -70315656 - AluSx SINE Alu -8 304 1 278 146 0 18 chr10 70001109 70001119 -70315646 + (TA)n Simple_repeat Simple_repeat 45 54 0 2094 144 0 0 chr10 70001120 70001426 -70315339 - AluSx SINE Alu -6 306 1 1002 232 87 88 chr10 70001532 70001792 -70314973 - MLT1F1 LTR MaLR -107 460 205 2532 70 0 0 chr10 70001792 70002094 -70314671 + AluY SINE Alu 1 302 -9 1002 232 87 88 chr10 70002094 70002299 -70314466 - MLT1F1 LTR MaLR -362 205 1 811 200 53 58 chr10 70002934 70003124 -70313641 - MER5A DNA MER1_type 0 189 1 182 115 192 58 chr10 70003218 70003270 -70313495 - L3 LINE CR1 -933 644 586 2142 113 17 0 chr10 70003501 70003792 -70312973 + AluSx SINE Alu 1 296 -16 1735 147 15 0 chr10 70003934 70004193 -70312572 + AluJo SINE Alu 19 281 -31 2090 112 7 3 chr10 70004193 70004477 -70312288 - AluSx SINE Alu -16 296 11 501 165 12 12 chr10 70004584 70004669 -70312096 - AluS SINE Alu -227 86 2 1540 177 3 51 chr10 70004817 70005133 -70311632 + AluJo SINE Alu 1 301 -11 873 174 0 0 chr10 70005140 70005272 -70311493 + FLAM_C SINE Alu 2 133 0 487 188 152 0 chr10 70005796 70005908 -70310857 - MIR SINE MIR -45 217 89 21 36 0 0 chr10 70005981 70006009 -70310756 + AT_rich Low_complexity Low_complexity 1 28 0 2387 89 0 3 chr10 70006152 70006455 -70310310 + AluSc SINE Alu 1 302 -7 831 163 0 8 chr10 70006463 70006592 -70310173 + FLAM_C SINE Alu 1 128 -5 1844 146 13 38 chr10 70006796 70007112 -70309653 + AluJb SINE Alu 4 311 -1 339 283 119 31 chr10 70007413 70007610 -70309155 + MIR SINE MIR 11 232 -30 2267 97 10 0 chr10 70007610 70007900 -70308865 + AluSg SINE Alu 3 295 -15 339 283 119 31 chr10 70007900 70007928 -70308837 + MIR SINE MIR 232 256 -6 777 156 9 15 chr10 70010352 70010599 -70306166 + AluJo SINE Alu 2 296 -16 306 0 0 0 chr10 70010599 70010633 -70306132 + (TA)n Simple_repeat Simple_repeat 2 35 0 1709 206 88 49 chr10 70011169 70011434 -70305331 - L1MD3 LINE L1 -1 8041 7788 665 136 76 68 chr10 70011434 70011566 -70305199 + FLAM_C SINE Alu 1 133 0 1709 206 88 49 chr10 70011566 70011892 -70304873 - L1MD3 LINE L1 -254 7788 7443 464 284 101 6 chr10 70012401 70012570 -70304195 + L1ME LINE L1 5517 5701 -420 246 243 74 40 chr10 70012756 70012904 -70303861 + L1ME LINE L1 5713 5865 -256 678 101 11 0 chr10 70013391 70013506 -70303259 + AluSg/x SINE Alu 191 306 0 191 321 0 0 chr10 70013506 70013562 -70303203 + L2 LINE L2 2996 3051 -221 1695 159 39 3 chr10 70013606 70013889 -70302876 - AluJb SINE Alu -14 298 6 2220 114 13 0 chr10 70013894 70014200 -70302565 - AluSx SINE Alu -2 310 1 810 262 63 4 chr10 70014326 70014563 -70302202 + MIR SINE MIR 11 261 -1 21 82 0 0 chr10 70014687 70014736 -70302029 + AT_rich Low_complexity Low_complexity 1 49 0 1859 126 161 64 chr10 70014778 70014819 -70301946 - MSTA LTR MaLR 0 428 392 1821 149 0 4 chr10 70014819 70015088 -70301677 + AluSq SINE Alu 1 268 -45 1859 126 161 64 chr10 70015088 70015436 -70301329 - MSTA LTR MaLR -36 392 1 1798 150 14 3 chr10 70015970 70016256 -70300509 - AluJb SINE Alu -19 293 5 237 309 93 21 chr10 70016352 70016449 -70300316 - L2 LINE L2 -4 3309 3206 253 332 80 34 chr10 70016510 70016792 -70299973 - L2 LINE L2 -235 3037 2737 2026 108 0 4 chr10 70017126 70017403 -70299362 - AluSg SINE Alu -6 304 29 2403 72 0 0 chr10 70019362 70019653 -70297112 + AluY SINE Alu 1 291 -20 1848 145 31 7 chr10 70019663 70019952 -70296813 + AluJb SINE Alu 1 296 -16 223 209 0 0 chr10 70019953 70019996 -70296769 - L2 LINE L2 -4 3309 3267 614 271 153 68 chr10 70020364 70020557 -70296208 - L2 LINE L2 0 3313 3138 2311 100 0 3 chr10 70020557 70020856 -70295909 - AluSx SINE Alu -14 298 1 614 271 153 68 chr10 70020856 70021210 -70295555 - L2 LINE L2 -175 3138 2815 2079 82 92 0 chr10 70021210 70021492 -70295273 - AluY SINE Alu -3 308 1 614 271 153 68 chr10 70021492 70021734 -70295031 - L2 LINE L2 -498 2815 2465 2084 115 3 14 chr10 70022182 70022502 -70294263 + AluSx SINE Alu 1 312 0 902 178 0 96 chr10 70022706 70022804 -70293961 + AluJb SINE Alu 134 205 -107 2303 78 20 7 chr10 70022804 70023097 -70293668 + AluSg SINE Alu 1 297 -13 902 178 0 96 chr10 70023097 70023195 -70293570 + AluJb SINE Alu 205 311 -1 1929 113 7 48 chr10 70023200 70023344 -70293421 + AluSg SINE Alu 1 149 -169 2569 51 0 0 chr10 70023344 70023640 -70293125 + AluY SINE Alu 1 296 -15 1929 113 7 48 chr10 70023640 70023825 -70292940 + AluSg SINE Alu 149 318 0 802 178 8 16 chr10 70023836 70023965 -70292800 + FLAM_A SINE Alu 1 128 -5 2197 120 0 0 chr10 70024029 70024320 -70292445 - AluSx SINE Alu -21 291 1 2143 104 10 10 chr10 70024555 70024862 -70291903 + AluSx SINE Alu 1 307 -5 201 108 0 0 chr10 70026130 70026167 -70290598 + (TG)n Simple_repeat Simple_repeat 2 38 0 1393 108 4 73 chr10 70026279 70026536 -70290229 - AluSg/x SINE Alu 0 310 85 317 43 0 43 chr10 70026544 70026591 -70290174 - AluSc SINE Alu -168 131 87 928 112 8 15 chr10 70026594 70026728 -70290037 - AluSq/x SINE Alu -179 133 1 601 170 82 19 chr10 70027343 70027502 -70289263 - Charlie1 DNA MER1_type -23 2738 2570 2017 124 0 3 chr10 70027503 70027785 -70288980 - AluSx SINE Alu -18 294 14 670 237 56 25 chr10 70027815 70028013 -70288752 - MIR SINE MIR -8 254 51 28 22 0 22 chr10 70028259 70028283 -70288482 + AT_rich Low_complexity Low_complexity 1 25 -20 2031 141 7 0 chr10 70028283 70028581 -70288184 + AluSx SINE Alu 1 300 -12 28 22 0 22 chr10 70028581 70028602 -70288163 + AT_rich Low_complexity Low_complexity 25 45 0 184 137 39 0 chr10 70028613 70028664 -70288101 + (TA)n Simple_repeat Simple_repeat 2 54 0 855 128 0 8 chr10 70028664 70028789 -70287976 - FLAM_C SINE Alu -6 137 14 651 162 0 0 chr10 70029029 70029128 -70287637 + AluJb SINE Alu 199 297 -15 928 114 38 8 chr10 70029148 70029280 -70287485 + AluJo SINE Alu 1 136 -176 2260 113 0 3 chr10 70029474 70029785 -70286980 - AluSx SINE Alu -2 310 1 2091 132 14 0 chr10 70030458 70030747 -70286018 - AluSx SINE Alu -19 293 1 284 152 0 7 chr10 70031023 70031076 -70285689 - AluSp SINE Alu -133 170 128 2104 126 0 0 chr10 70031106 70031391 -70285374 + AluY SINE Alu 1 285 -26 34 55 0 0 chr10 70031391 70031446 -70285319 + AT_rich Low_complexity Low_complexity 1 55 0 515 250 33 8 chr10 70031586 70031706 -70285059 + FLAM_A SINE Alu 1 123 -10 1956 162 3 3 chr10 70031762 70032071 -70284694 + AluJb SINE Alu 1 309 -3 213 296 102 36 chr10 70032157 70032265 -70284500 - L2 LINE L2 -1215 2099 2000 2299 115 0 7 chr10 70032265 70032570 -70284195 + AluSq SINE Alu 1 303 -10 213 296 102 36 chr10 70032570 70032657 -70284108 - L2 LINE L2 -1314 2000 1891 1909 160 6 6 chr10 70032833 70033145 -70283620 + AluSx SINE Alu 1 312 0 5247 83 14 5 chr10 70033326 70033980 -70282785 + PABL_A LTR ERV1 1 660 0 599 275 33 16 chr10 70034526 70034708 -70282057 - MER5A DNA MER1_type -4 185 1 2383 93 0 0 chr10 70034986 70035287 -70281478 - AluSx SINE Alu -7 305 5 1885 151 14 7 chr10 70035554 70035845 -70280920 + AluSx SINE Alu 1 293 -19 932 138 0 7 chr10 70036519 70036657 -70280108 + FLAM_C SINE Alu 1 137 -6 225 157 39 0 chr10 70036657 70036708 -70280057 + (TA)n Simple_repeat Simple_repeat 1 53 0 28 22 0 22 chr10 70036719 70036740 -70280025 + AT_rich Low_complexity Low_complexity 1 21 -24 1960 145 10 0 chr10 70036740 70037037 -70279728 - AluSx SINE Alu -12 300 1 28 22 0 22 chr10 70037037 70037061 -70279704 + AT_rich Low_complexity Low_complexity 21 45 0 670 237 56 25 chr10 70037307 70037505 -70279260 + MIR SINE MIR 51 254 -8 2017 124 0 3 chr10 70037535 70037817 -70278948 + AluSx SINE Alu 14 294 -18 601 170 82 19 chr10 70037818 70037977 -70278788 + Charlie1 DNA MER1_type 2570 2738 -23 928 112 8 15 chr10 70038592 70038726 -70278039 + AluSq/x SINE Alu 1 133 -179 317 43 0 43 chr10 70038729 70038776 -70277989 + AluSc SINE Alu 87 131 -168 1381 107 4 81 chr10 70038784 70039043 -70277722 + AluSg/x SINE Alu 85 310 0 201 108 0 0 chr10 70039155 70039192 -70277573 + (CA)n Simple_repeat Simple_repeat 2 38 0 2130 108 10 10 chr10 70040460 70040767 -70275998 - AluSx SINE Alu -5 307 1 1409 169 15 26 chr10 70041002 70041274 -70275491 + AluSx SINE Alu 1 269 -43 1814 101 12 4 chr10 70041686 70041943 -70274822 + AluSx SINE Alu 39 297 -15 307 251 112 77 chr10 70041949 70042272 -70274493 - HAL1 LINE L1 -31 2476 2143 298 278 76 21 chr10 70042336 70042480 -70274285 - HAL1b LINE L1 -451 897 746 1143 123 0 0 chr10 70042493 70042655 -70274110 + AluY SINE Alu 133 294 -17 1800 163 0 10 chr10 70042794 70043082 -70273683 - AluJo SINE Alu -27 285 1 311 259 56 37 chr10 70043215 70043323 -70273442 - HAL1 LINE L1 -575 1932 1823 1957 115 38 3 chr10 70043366 70043654 -70273111 + AluSx SINE Alu 1 298 -14 1181 186 0 18 chr10 70043958 70044178 -70272587 + AluJb SINE Alu 1 216 -96 1721 178 36 128 chr10 70044337 70044739 -70272026 - MLT1D LTR MaLR 0 505 166 2163 89 43 0 chr10 70044739 70045019 -70271746 + AluY SINE Alu 1 292 -19 1721 178 36 128 chr10 70045019 70045172 -70271593 - MLT1D LTR MaLR -339 166 1 204 125 0 0 chr10 70045201 70045233 -70271532 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 880 266 95 43 chr10 70045266 70045635 -70271130 - MLT1K LTR MaLR -157 431 44 652 138 0 73 chr10 70045637 70045708 -70271057 + L1MB3 LINE L1 6068 6128 -55 2142 128 0 0 chr10 70045708 70046004 -70270761 + AluJb SINE Alu 1 296 -16 652 138 0 73 chr10 70046004 70046055 -70270710 + L1MB3 LINE L1 6128 6181 -2 1000 234 115 29 chr10 70046080 70046392 -70270373 + MLT1K LTR MaLR 248 586 -2 350 167 0 0 chr10 70046575 70046629 -70270136 - Charlie1b DNA MER1_type 0 523 470 828 163 0 0 chr10 70046638 70046761 -70270004 + FLAM_C SINE Alu 1 123 -20 1661 167 83 92 chr10 70046769 70046854 -70269911 - Charlie1b DNA MER1_type -2274 487 403 1912 159 0 10 chr10 70046854 70047168 -70269597 - AluJo SINE Alu -1 311 1 1661 167 83 92 chr10 70047168 70047249 -70269516 - Charlie1b DNA MER1_type -2358 403 323 2063 122 34 0 chr10 70047249 70047543 -70269222 - AluSx SINE Alu -8 304 1 1661 167 83 92 chr10 70047543 70047604 -70269161 - Charlie1b DNA MER1_type -2438 323 263 2253 89 0 0 chr10 70047604 70047995 -70268770 - AluSg SINE Alu 0 391 1 1661 167 83 92 chr10 70047995 70048255 -70268510 - Charlie1b DNA MER1_type -2498 263 1 545 260 179 0 chr10 70048270 70048443 -70268322 + MIR SINE MIR 47 250 -12 202 285 163 12 chr10 70048490 70048662 -70268103 - L2 LINE L2 -887 2427 2230 242 193 227 11 chr10 70048700 70048788 -70267977 + L2 LINE L2 3193 3299 -14 1410 107 38 86 chr10 70048794 70048956 -70267809 - AluJo SINE Alu -24 288 145 2283 100 0 0 chr10 70048956 70049255 -70267510 - AluSx SINE Alu -13 299 1 1410 107 38 86 chr10 70049255 70049382 -70267383 - AluJo SINE Alu -167 145 13 2060 139 13 7 chr10 70049575 70049876 -70266889 - AluJo SINE Alu -9 303 1 2062 120 31 0 chr10 70050359 70050650 -70266115 - AluSx SINE Alu -12 300 1 2146 164 67 5 chr10 70051407 70051797 -70264968 + MLT2D LTR ERVL 1 414 0 1962 111 7 24 chr10 70052031 70052319 -70264446 + AluSx SINE Alu 13 295 -17 314 292 50 17 chr10 70052652 70052772 -70263993 - L2 LINE L2 -1 3271 3148 470 240 29 76 chr10 70053057 70053228 -70263537 + MIR SINE MIR 39 201 -61 2176 121 7 10 chr10 70053334 70053640 -70263125 - AluSx SINE Alu -7 305 1 739 175 48 36 chr10 70053898 70054064 -70262701 + LTR49 LTR ERV1 428 595 0 1895 126 20 3 chr10 70054064 70054358 -70262407 - L1M1 LINE L1 -512 5788 5490 2172 111 3 0 chr10 70054365 70054663 -70262102 - AluSx SINE Alu -8 304 6 643 159 65 0 chr10 70054681 70054788 -70261977 + AluJo SINE Alu 126 239 -73 7051 135 15 17 chr10 70054788 70056052 -70260713 - L1M1 LINE L1 -743 5403 4182 22 0 0 0 chr10 70056224 70056246 -70260519 + AT_rich Low_complexity Low_complexity 1 22 0 4574 84 12 2 chr10 70056998 70057595 -70259170 + HERVL LTR ERVL 3 605 -5049 2168 113 3 10 chr10 70058337 70058637 -70258128 - AluSx SINE Alu -14 298 1 234 239 14 14 chr10 70058867 70058938 -70257827 - L1ME4a LINE L1 -109 6012 5942 25 51 0 0 chr10 70059495 70059534 -70257231 + AT_rich Low_complexity Low_complexity 1 39 0 261 98 0 0 chr10 70059575 70059616 -70257149 - HSMAR1 DNA Mariner 0 1287 1247 297 0 0 0 chr10 70059751 70059784 -70256981 + (T)n Simple_repeat Simple_repeat 1 33 0 458 92 15 0 chr10 70059784 70059849 -70256916 - MER41A LTR ERV1 -90 464 399 347 329 78 73 chr10 70060192 70060614 -70256151 - L2 LINE L2 -1 3271 2848 426 35 0 69 chr10 70060918 70061005 -70255760 + (TA)n Simple_repeat Simple_repeat 1 81 0 2272 95 10 3 chr10 70061204 70061500 -70255265 + AluSq SINE Alu 1 298 -15 26 50 0 0 chr10 70061825 70061865 -70254900 + AT_rich Low_complexity Low_complexity 1 40 0 2371 100 3 0 chr10 70062730 70063041 -70253724 - AluSx SINE Alu 0 312 1 216 269 26 13 chr10 70063935 70064013 -70252752 + L3b LINE CR1 1149 1227 -356 418 340 76 28 chr10 70064232 70064482 -70252283 - L2 LINE L2 -32 3240 2979 180 394 32 0 chr10 70064958 70065052 -70251713 + MIR SINE MIR 123 219 -43 2158 117 3 7 chr10 70065099 70065408 -70251357 - AluSg SINE Alu -2 308 1 273 146 0 0 chr10 70065502 70065543 -70251222 - L2 LINE L2 -16 3256 3216 1394 38 0 0 chr10 70066520 70066680 -70250085 - AluY SINE Alu -1 310 151 345 183 12 85 chr10 70066683 70066765 -70250000 + MLT1E LTR MaLR 48 123 -470 1347 207 143 30 chr10 70066789 70067117 -70249648 + MLT1E LTR MaLR 259 592 -1 28 0 0 0 chr10 70068113 70068141 -70248624 + AT_rich Low_complexity Low_complexity 1 28 0 345 24 0 0 chr10 70068549 70068591 -70248174 + (TG)n Simple_repeat Simple_repeat 2 43 0 2600 65 0 0 chr10 70068958 70069268 -70247497 + AluSg SINE Alu 1 310 0 225 0 0 0 chr10 70069323 70069348 -70247417 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 429 312 38 64 chr10 70069497 70069654 -70247111 - L2 LINE L2 -7 3265 3113 184 330 71 9 chr10 70071071 70071183 -70245582 - L2 LINE L2 -1438 1876 1758 234 191 0 0 chr10 70072778 70072825 -70243940 + G-rich Low_complexity Low_complexity 5 51 0 31 0 0 0 chr10 70072888 70072919 -70243846 + AT_rich Low_complexity Low_complexity 1 31 0 515 282 97 29 chr10 70074137 70074343 -70242422 - MIR SINE MIR -36 226 7 216 333 46 20 chr10 70074439 70074592 -70242173 + L2 LINE L2 2552 2708 -606 202 258 13 13 chr10 70074643 70074718 -70242047 - MIR SINE MIR -71 137 62 2035 114 19 19 chr10 70075269 70075576 -70241189 + AluSq SINE Alu 1 307 -6 1144 136 0 0 chr10 70075598 70075790 -70240975 + AluSq SINE Alu 131 322 0 1169 202 32 5 chr10 70075918 70076136 -70240629 + MER58A DNA MER1_type 1 224 0 350 286 102 0 chr10 70076279 70076426 -70240339 - MARNA DNA Mariner -102 484 323 1259 190 35 64 chr10 70076570 70076912 -70239853 + MLT2C1 LTR ERVL 1 332 -65 237 128 0 0 chr10 70076914 70076961 -70239804 + (TC)n Simple_repeat Simple_repeat 1 47 0 21 36 0 0 chr10 70077341 70077369 -70239396 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 70077717 70077745 -70239020 + AT_rich Low_complexity Low_complexity 1 28 0 483 231 132 58 chr10 70078236 70078531 -70238234 + L1ME4a LINE L1 5639 5955 -166 2357 23 0 0 chr10 70078598 70078858 -70237907 + AluYa5 SINE Alu 51 310 -1 1694 180 3 71 chr10 70079446 70079812 -70236953 + MER2 DNA MER2_type 2 342 -2 274 264 126 11 chr10 70080714 70080801 -70235964 + MIR3 SINE MIR 91 187 -21 430 81 0 0 chr10 70080927 70080989 -70235776 + Alu SINE Alu 247 308 -4 1823 186 100 134 chr10 70081426 70082392 -70234373 + LTR1B LTR ERV1 1 1020 0 2347 158 61 18 chr10 70082590 70083032 -70233733 - LOR1b LTR ERV1 0 461 1 2257 117 0 0 chr10 70084416 70084716 -70232049 - AluSx SINE Alu -12 300 1 826 260 65 4 chr10 70085031 70085262 -70231503 - MIR SINE MIR -5 257 13 239 243 48 39 chr10 70087418 70087521 -70229244 + MER103 DNA DNA 18 121 -45 2333 51 0 14 chr10 70087575 70087867 -70228898 - AluY SINE Alu -3 308 21 1034 114 0 84 chr10 70087904 70087982 -70228783 - L1MB2 LINE L1 -16 6155 6072 2365 56 7 10 chr10 70087982 70088286 -70228479 + AluY SINE Alu 1 303 -8 1034 114 0 84 chr10 70088286 70088409 -70228356 - L1MB2 LINE L1 -99 6072 5971 304 288 153 17 chr10 70088430 70088607 -70228158 - MIR3 SINE MIR -1 207 7 1023 208 118 65 chr10 70091032 70091472 -70225293 + MER31B LTR ERV1 1 538 -5 3175 164 21 18 chr10 70091481 70092029 -70224736 + L1MB7 LINE L1 5562 6114 -70 2349 91 0 16 chr10 70092029 70092337 -70224428 - AluSg SINE Alu -7 303 1 3175 164 21 18 chr10 70092337 70092399 -70224366 + L1MB7 LINE L1 6114 6174 -10 303 268 179 0 chr10 70092425 70092537 -70224228 - L2 LINE L2 -1 3312 3181 180 290 145 0 chr10 70092530 70092592 -70224173 + MIR SINE MIR 42 112 -96 * 792 304 171 5 chr10 70092723 70093151 -70223614 - L2 LINE L2 -204 3068 2581 2459 62 0 3 chr10 70093307 70093611 -70223154 + AluY SINE Alu 1 303 -8 327 282 124 25 chr10 70093613 70093815 -70222950 + MIR SINE MIR 33 254 -8 1811 174 0 0 chr10 70095085 70095389 -70221376 - AluJb SINE Alu 0 304 1 204 207 0 35 chr10 70095626 70095684 -70221081 + A-rich Low_complexity Low_complexity 4 59 0 1525 170 18 104 chr10 70096492 70096886 -70219879 + MLT1A2 LTR MaLR 4 363 -11 2281 108 0 0 chr10 70097797 70098092 -70218673 - AluSx SINE Alu -17 295 1 26 64 0 0 chr10 70098144 70098191 -70218574 + AT_rich Low_complexity Low_complexity 1 47 0 1737 177 0 40 chr10 70098827 70099127 -70217638 - AluJb SINE Alu -24 288 1 3914 106 23 5 chr10 70099474 70100088 -70216677 - L1MA2 LINE L1 -1 6303 5679 235 328 92 8 chr10 70101749 70101880 -70214885 - L3 LINE CR1 -864 713 572 2280 86 13 16 chr10 70102150 70102463 -70214302 - AluSp SINE Alu -1 312 1 2893 93 29 27 chr10 70102577 70103020 -70213745 + MLT2A1 LTR ERVL 1 444 0 366 348 14 7 chr10 70103198 70103336 -70213429 + MIR SINE MIR 8 146 -116 2022 119 0 4 chr10 70103337 70103614 -70213151 + AluSx SINE Alu 26 301 -11 180 0 0 0 chr10 70103626 70103646 -70213119 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 247 311 160 0 chr10 70103911 70104017 -70212748 - L3 LINE CR1 -1050 527 405 2171 99 28 0 chr10 70104681 70104965 -70211800 + AluSx SINE Alu 4 295 -17 214 345 60 0 chr10 70105098 70105182 -70211583 + L2 LINE L2 3179 3267 -5 463 241 96 6 chr10 70105704 70105870 -70210895 + L1ME4a LINE L1 5734 5914 -207 2323 70 0 0 chr10 70105888 70106203 -70210562 - AluY SINE Alu 0 315 1 862 282 139 18 chr10 70106947 70107665 -70209100 + L2 LINE L2 2403 3265 -48 15498 126 62 14 chr10 70107726 70107860 -70208905 + Tigger2 DNA MER2_type 1 127 -2591 2364 81 0 3 chr10 70107860 70108167 -70208598 - AluSc SINE Alu -3 306 1 15498 126 62 14 chr10 70108167 70108573 -70208192 + Tigger2 DNA MER2_type 127 512 -2206 2243 94 0 31 chr10 70108573 70108892 -70207873 - AluY SINE Alu -2 309 1 15498 126 62 14 chr10 70108892 70110944 -70205821 + Tigger2 DNA MER2_type 512 2718 0 496 253 133 6 chr10 70111819 70111985 -70204780 - MIR SINE MIR -71 191 5 356 371 115 24 chr10 70112141 70112516 -70204249 - L2 LINE L2 -12 3260 2852 486 310 71 15 chr10 70112671 70112868 -70203897 + MIR SINE MIR 49 256 -6 2145 271 104 17 chr10 70113024 70114060 -70202705 - L2 LINE L2 0 3313 2188 266 323 47 24 chr10 70114067 70114194 -70202571 + MIR SINE MIR 23 152 -110 1415 138 9 18 chr10 70114201 70114419 -70202346 + AluSx SINE Alu 36 251 -61 643 187 0 0 chr10 70165530 70165637 -70151128 + U6 snRNA snRNA 1 107 0 3478 155 25 9 chr10 70165637 70166308 -70150457 + L1P LINE L1 2561 3242 -2904 584 136 8 25 chr10 70166956 70167074 -70149691 - L1PA16 LINE L1 -3 6163 6048 26 50 0 0 chr10 70167099 70167139 -70149626 + AT_rich Low_complexity Low_complexity 1 40 0 2595 51 3 13 chr10 70168138 70168452 -70148313 + AluY SINE Alu 1 311 0 984 238 123 22 chr10 70168592 70168949 -70147816 + MSTD LTR MaLR 1 393 -3 710 172 30 8 chr10 70168989 70169123 -70147642 + MER5A DNA MER1_type 1 137 -52 222 338 142 25 chr10 70169287 70169527 -70147238 - L2 LINE L2 -439 2875 2608 483 184 35 0 chr10 70169857 70169944 -70146821 + FLAM_A SINE Alu 1 90 -52 1622 111 65 15 chr10 70170042 70170304 -70146461 + AluSx SINE Alu 1 275 -37 22 0 0 0 chr10 70170424 70170446 -70146319 + AT_rich Low_complexity Low_complexity 1 22 0 2088 148 3 0 chr10 70170446 70170751 -70146014 + AluJb SINE Alu 1 306 -6 2347 97 3 0 chr10 70170791 70171102 -70145663 - AluSx SINE Alu 0 312 1 253 232 43 0 chr10 70171133 70171202 -70145563 - L1ME LINE L1 -457 5664 5593 249 261 14 0 chr10 70171202 70171271 -70145494 + MIR3 SINE MIR 131 200 -8 2176 106 0 27 chr10 70172884 70173185 -70143580 + AluSx SINE Alu 1 293 -19 354 185 108 127 chr10 70174449 70174548 -70142217 + MIR3 SINE MIR 40 136 -72 1836 185 58 52 chr10 70174548 70175046 -70141719 - MLT1D LTR MaLR 0 505 5 354 185 108 127 chr10 70175046 70175103 -70141662 + MIR3 SINE MIR 136 193 -15 2273 117 7 0 chr10 70175145 70175570 -70141195 + AluSx SINE Alu 1 427 0 450 268 85 0 chr10 70176442 70176606 -70140159 + MER5B DNA MER1_type 1 178 0 275 175 0 0 chr10 70176774 70176814 -70139951 + Alu SINE Alu 1 40 -259 2319 110 7 0 chr10 70176814 70177165 -70139600 - AluSg SINE Alu 0 353 1 595 162 0 36 chr10 70177165 70177276 -70139489 + FLAM_C SINE Alu 27 133 -10 216 260 102 47 chr10 70178015 70178142 -70138623 + MIR SINE MIR 20 153 -55 266 305 67 39 chr10 70178387 70178669 -70138096 - L2 LINE L2 -459 2855 2566 270 327 47 9 chr10 70178974 70179081 -70137684 - L2 LINE L2 -30 3242 3132 381 222 45 97 chr10 70179220 70179396 -70137369 - MER69A DNA AcHobo -3 174 8 181 242 234 55 chr10 70179397 70179525 -70137240 - MIR SINE MIR -1 261 111 255 325 21 10 chr10 70179881 70179991 -70136774 + MIR SINE MIR 45 154 -71 216 111 0 0 chr10 70181012 70181048 -70135717 + (GGA)n Simple_repeat Simple_repeat 2 37 0 1825 161 10 29 chr10 70183019 70183329 -70133436 - AluJb SINE Alu -8 304 1 239 256 37 37 chr10 70183668 70183750 -70133015 + L2 LINE L2 2712 2793 -521 352 298 103 58 chr10 70183866 70184178 -70132587 + L2 LINE L2 2933 3258 -14 818 105 0 0 chr10 70184447 70184552 -70132213 - AluSq/x SINE Alu -207 105 1 282 290 163 32 chr10 70184928 70185149 -70131616 + MIR SINE MIR 1 250 -12 403 246 144 12 chr10 70185769 70185936 -70130829 - MER5A DNA MER1_type 0 189 1 2613 51 0 0 chr10 70186026 70186320 -70130445 + AluY SINE Alu 1 294 -17 834 194 0 0 chr10 70186821 70186960 -70129805 - FLAM_C SINE Alu 0 143 5 270 328 60 35 chr10 70186966 70187082 -70129683 + MIR SINE MIR 123 241 -21 329 161 0 0 chr10 70187390 70187446 -70129319 + Alu SINE Alu 1 56 -244 799 179 6 19 chr10 70187391 70187547 -70129218 + AluJo/FRAM SINE Alu 137 290 -12 2085 100 0 0 chr10 70187549 70187829 -70128936 + AluSx SINE Alu 1 280 -32 285 20 39 39 chr10 70187831 70187882 -70128883 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 594 283 25 6 chr10 70188270 70188429 -70128336 - MIR SINE MIR -32 230 69 23 0 0 0 chr10 70188646 70188669 -70128096 + AT_rich Low_complexity Low_complexity 1 23 0 391 252 55 8 chr10 70188779 70188906 -70127859 + MER102b DNA MER1_type 208 340 -1 241 231 0 0 chr10 70188944 70188996 -70127769 + MER96 DNA MER1_type? 2 53 -122 247 333 0 0 chr10 70189168 70189264 -70127501 + MER34 LTR ERV1 1 96 -446 876 229 105 14 chr10 70189316 70189572 -70127193 + LTR29 LTR ERV1 170 446 -149 1978 119 0 7 chr10 70189572 70189866 -70126899 + AluSx SINE Alu 1 292 -20 876 229 105 14 chr10 70189866 70190026 -70126739 + LTR29 LTR ERV1 446 590 -5 2139 108 3 0 chr10 70190176 70190473 -70126292 + AluSg SINE Alu 1 298 -12 1684 99 22 83 chr10 70190724 70191037 -70125728 + MER4B LTR ERV1 1 294 -316 2264 91 0 0 chr10 70191039 70191335 -70125430 - AluSx SINE Alu -16 296 1 1057 143 53 16 chr10 70191335 70191524 -70125241 + MER4E LTR ERV1 584 779 0 2096 125 0 0 chr10 70191667 70191971 -70124794 - AluSx SINE Alu -8 304 1 433 145 0 0 chr10 70191974 70192043 -70124722 - AluY SINE Alu -12 299 231 2250 86 0 10 chr10 70192043 70192345 -70124420 - AluSq SINE Alu -14 299 1 1643 119 4 4 chr10 70192346 70192590 -70124175 - AluY SINE Alu -67 244 1 2036 144 0 22 chr10 70192655 70192850 -70123915 + MER1B DNA MER1_type 34 221 -2491 2300 164 47 45 chr10 70192850 70193339 -70123426 + LTR2B LTR ERV1 1 490 0 2036 144 0 22 chr10 70193339 70193455 -70123310 + MER1B DNA MER1_type 221 338 -1 1972 133 3 3 chr10 70193478 70193779 -70122986 + AluSx SINE Alu 1 301 -11 994 236 22 9 chr10 70193845 70194070 -70122695 - MIR SINE MIR -2 260 33 292 319 50 6 chr10 70194457 70194617 -70122148 + L2 LINE L2 2246 2412 -902 * 296 258 90 0 chr10 70194612 70194701 -70122064 - L2 LINE L2 0 3313 3217 1211 179 54 150 chr10 70194703 70195198 -70121567 + MER4A LTR ERV1 29 285 -180 2083 97 7 13 chr10 70195198 70195542 -70121223 - AluY SINE Alu 0 311 1 1211 179 54 150 chr10 70195542 70195700 -70121065 + MER4A LTR ERV1 285 457 -8 2225 94 10 3 chr10 70195702 70196044 -70120721 - AluSx SINE Alu 0 344 1 185 321 12 62 chr10 70196085 70196166 -70120599 - L2 LINE L2 -94 3219 3143 923 251 27 53 chr10 70196203 70196502 -70120263 + MLT1J LTR MaLR 20 310 -201 657 240 78 16 chr10 70196538 70196730 -70120035 + MLT1C LTR MaLR 193 396 -71 235 253 69 0 chr10 70196712 70196799 -70119966 + MLT1J LTR MaLR 297 389 -204 * 4303 109 14 68 chr10 70196854 70197009 -70119756 + LTR8 LTR ERV1 1 163 -528 2051 104 0 0 chr10 70197009 70197289 -70119476 + AluSx SINE Alu 1 280 -32 422 18 0 18 chr10 70197295 70197351 -70119414 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 4303 109 14 68 chr10 70197351 70197919 -70118846 + LTR8 LTR ERV1 168 691 0 1304 123 0 52 chr10 70197919 70198130 -70118635 + HUERS-P1 LTR ERV1 1 200 -6063 1076 111 14 0 chr10 70198130 70198274 -70118491 + LTR8 LTR ERV1 546 691 0 1831 142 13 13 chr10 70198840 70199150 -70117615 + AluSg SINE Alu 1 310 0 198 103 0 0 chr10 70199253 70199282 -70117483 - MIR SINE MIR -69 139 111 497 125 102 0 chr10 70199350 70199438 -70117327 - MER33 DNA MER1_type -1 362 266 570 184 70 9 chr10 70199438 70199552 -70117213 - FRAM SINE Alu -20 156 36 855 202 17 84 chr10 70199554 70199625 -70117140 - MER33 DNA MER1_type -2363 222 148 1676 164 7 20 chr10 70199625 70199924 -70116841 - AluJo SINE Alu -17 295 1 855 202 17 84 chr10 70199924 70200090 -70116675 - MER33 DNA MER1_type -2437 148 1 1125 200 66 87 chr10 70200174 70200337 -70116428 - MER39 LTR ERV1 -1 687 522 2152 119 3 0 chr10 70200337 70200648 -70116117 + AluSx SINE Alu 1 312 0 1125 200 66 87 chr10 70200648 70200966 -70115799 - MER39 LTR ERV1 -166 522 1 197 333 53 18 chr10 70201030 70201144 -70115621 + MIR SINE MIR 32 149 -59 327 313 8 39 chr10 70201831 70201959 -70114806 + MIR SINE MIR 17 140 -68 2837 158 9 44 chr10 70202005 70202056 -70114709 + L1MB7 LINE L1 5622 5673 -511 2304 100 0 0 chr10 70202056 70202365 -70114400 + AluSc SINE Alu 1 309 0 2837 158 9 44 chr10 70202365 70202877 -70113888 + L1MB7 LINE L1 5673 6165 -19 267 340 39 10 chr10 70202968 70203071 -70113694 + MIR SINE MIR 151 256 -6 648 299 81 34 chr10 70203754 70204221 -70112544 + L1ME3A LINE L1 5452 5937 -233 1865 116 55 17 chr10 70204223 70204516 -70112249 + AluSx SINE Alu 1 304 -8 260 61 0 0 chr10 70205924 70205957 -70110808 + AluJ/FRAM SINE Alu 229 261 -41 25 0 0 0 chr10 70207284 70207309 -70109456 + AT_rich Low_complexity Low_complexity 1 25 0 2346 59 3 0 chr10 70207319 70207605 -70109160 + AluSp SINE Alu 12 298 -15 2203 104 3 0 chr10 70207665 70207963 -70108802 + AluSg SINE Alu 1 299 -11 778 173 80 75 chr10 70208024 70208250 -70108515 + AluJo SINE Alu 86 312 0 680 129 0 0 chr10 70208735 70208836 -70107929 - FLAM_C SINE Alu -7 136 36 376 275 46 9 chr10 70208888 70208997 -70107768 - L2 LINE L2 -2 3311 3199 1912 108 51 10 chr10 70209008 70209303 -70107462 + AluSx SINE Alu 1 307 -5 2405 65 0 3 chr10 70209744 70210050 -70106715 - AluY SINE Alu -6 305 1 1085 110 7 0 chr10 70210055 70210210 -70106555 - AluSq SINE Alu -10 303 148 1783 133 0 36 chr10 70210226 70210528 -70106237 - AluSx SINE Alu -13 299 9 2056 113 0 3 chr10 70210540 70210833 -70105932 - AluSg SINE Alu -18 292 1 424 119 0 48 chr10 70211465 70211549 -70105216 + AluS SINE Alu 232 311 0 1319 79 0 0 chr10 70211549 70211714 -70105051 - AluSx SINE Alu -90 222 58 2027 126 7 0 chr10 70211758 70212059 -70104706 - AluSq SINE Alu -10 303 1 7761 166 97 39 chr10 70212096 70213826 -70102939 - L1MC3 LINE L1 -23 7762 5934 1691 160 6 26 chr10 70213842 70214154 -70102611 - AluSx SINE Alu -6 306 1 246 259 63 73 chr10 70214215 70214420 -70102345 - HAL1 LINE L1 -2216 291 89 497 234 211 0 chr10 70215372 70215500 -70101265 + MIR SINE MIR 2 156 -106 197 194 28 0 chr10 70215945 70215981 -70100784 + MIR3 SINE MIR 133 169 -39 2073 115 0 23 chr10 70216279 70216583 -70100182 - AluSx SINE Alu -15 297 1 644 156 0 0 chr10 70216613 70216709 -70100056 + FLAM_A SINE Alu 1 96 -46 249 153 0 119 chr10 70216717 70216776 -70099989 + FLAM_A SINE Alu 73 124 -9 1021 117 0 0 chr10 70217161 70217306 -70099459 + AluSg/x SINE Alu 162 306 -6 356 290 122 0 chr10 70217418 70217525 -70099240 + MIR SINE MIR 28 147 -115 1610 197 7 0 chr10 70217526 70217835 -70098930 + AluJb SINE Alu 1 311 -1 2229 78 7 16 chr10 70218035 70218343 -70098422 - AluSq SINE Alu -8 305 1 2281 82 0 0 chr10 70219570 70219864 -70096901 + AluSq SINE Alu 1 294 -19 231 303 56 11 chr10 70220222 70220311 -70096454 - MIR3 SINE MIR -106 102 10 1466 164 74 30 chr10 70220344 70220642 -70096123 + AluJb SINE Alu 1 311 -1 2096 124 0 0 chr10 70220642 70220941 -70095824 + AluSx SINE Alu 1 299 -13 404 287 77 59 chr10 70222058 70222281 -70094484 - L1ME4a LINE L1 -199 5922 5690 2263 72 7 0 chr10 70222281 70222586 -70094179 - AluSx SINE Alu -5 307 1 404 287 77 59 chr10 70222586 70222686 -70094079 - L1ME4a LINE L1 -431 5690 5593 379 53 0 53 chr10 70222810 70222867 -70093898 + AluJb SINE Alu 82 135 -167 1493 181 20 24 chr10 70222867 70223160 -70093605 + AluJo SINE Alu 1 292 -20 2291 98 0 0 chr10 70224049 70224346 -70092419 + AluSx SINE Alu 1 297 -15 1793 157 23 3 chr10 70224352 70224658 -70092107 + AluJb SINE Alu 1 312 0 2155 83 3 22 chr10 70224658 70224972 -70091793 + AluSx SINE Alu 1 308 -4 765 228 98 18 chr10 70225145 70225356 -70091409 - MIR SINE MIR -1 261 30 1097 201 48 0 chr10 70225356 70225565 -70091200 + MER20 DNA MER1_type 1 219 0 765 228 98 18 chr10 70225565 70225577 -70091188 - MIR SINE MIR -232 30 20 913 129 8 0 chr10 70226252 70226384 -70090381 - FLAM_C SINE Alu -10 133 1 243 61 0 0 chr10 70226447 70226480 -70090285 + (TTA)n Simple_repeat Simple_repeat 2 34 0 391 206 0 14 chr10 70226499 70226572 -70090193 - FRAM/FAM SINE Alu -100 66 1 953 111 0 35 chr10 70226656 70226800 -70089965 - AluSq/x SINE Alu -174 139 1 2303 86 0 10 chr10 70226808 70227112 -70089653 - AluSx SINE Alu -11 301 1 233 167 0 0 chr10 70227596 70227638 -70089127 + MARNA DNA Mariner 503 544 -42 184 305 137 30 chr10 70228018 70228149 -70088616 - L2 LINE L2 -685 2629 2485 551 219 25 8 chr10 70230424 70230543 -70086222 + MER5B DNA MER1_type 1 121 -57 809 200 40 11 chr10 70230568 70230743 -70086022 + AluJo SINE Alu 22 201 -111 1532 118 49 59 chr10 70230743 70230920 -70085845 + LTR12 LTR ERV1 1 175 -539 1797 91 28 4 chr10 70230920 70231173 -70085592 + AluSp SINE Alu 1 259 -54 1532 118 49 59 chr10 70231173 70231283 -70085482 + LTR12 LTR ERV1 175 285 -429 298 233 0 0 chr10 70231283 70231356 -70085409 + LTR30 LTR ERV1 552 624 -98 611 154 36 18 chr10 70231360 70231470 -70085295 + LTR12 LTR ERV1 470 581 -133 407 224 47 0 chr10 70231471 70231556 -70085209 + AluJo SINE Alu 199 287 -15 242 191 103 44 chr10 70231646 70231714 -70085051 - MER34 LTR ERV1 -4 538 467 626 137 0 20 chr10 70231734 70231836 -70084929 + FLAM_C SINE Alu 38 137 -6 195 129 0 0 chr10 70232288 70232319 -70084446 + MIR3 SINE MIR 172 202 -6 1666 115 0 0 chr10 70232329 70232572 -70084193 - AluY SINE Alu -4 307 65 1678 96 10 103 chr10 70232574 70232875 -70083890 + LTR12 LTR ERV1 1 273 -441 325 206 11 33 chr10 70232906 70232998 -70083767 + LTR30 LTR ERV1 553 642 -80 655 116 0 0 chr10 70233000 70233086 -70083679 + LTR12 LTR ERV1 481 566 -148 507 113 0 25 chr10 70233086 70233166 -70083599 - AluSg1 SINE Alu -230 79 2 429 63 0 48 chr10 70233320 70233383 -70083382 - AluJ/FLAM SINE Alu -251 61 2 2366 67 3 0 chr10 70233472 70233769 -70082996 + AluSp SINE Alu 1 298 -15 369 0 0 0 chr10 70234251 70234292 -70082473 + (TG)n Simple_repeat Simple_repeat 2 42 0 444 203 32 154 chr10 70234292 70234597 -70082168 - L1ME4a LINE L1 -6 6115 5849 280 318 26 66 chr10 70234747 70234898 -70081867 + MIR3 SINE MIR 17 161 -47 181 146 24 49 chr10 70234963 70235004 -70081761 + MIR3 SINE MIR 160 199 -9 792 167 0 0 chr10 70235083 70235215 -70081550 - FLAM_A SINE Alu 0 133 2 2808 6 0 0 chr10 70235337 70235649 -70081116 - AluYb8 SINE Alu -6 312 1 317 263 25 0 chr10 70235685 70235765 -70081000 - MIR SINE MIR -97 165 84 252 284 49 20 chr10 70235827 70235929 -70080836 + L3b LINE CR1 1130 1234 -349 763 179 93 0 chr10 70236740 70236891 -70079874 - FRAM SINE Alu -1 165 1 959 165 0 24 chr10 70237148 70237312 -70079453 + FAM SINE Alu 11 170 -15 581 308 55 56 chr10 70237867 70238453 -70078312 - L2 LINE L2 0 3313 2717 2055 122 0 3 chr10 70238453 70238757 -70078008 - AluSx SINE Alu -9 303 1 581 308 55 56 chr10 70238757 70238913 -70077852 - L2 LINE L2 -596 2717 2562 195 42 0 0 chr10 70239398 70239422 -70077343 + (A)n Simple_repeat Simple_repeat 1 24 0 557 184 104 61 chr10 70239434 70239597 -70077168 - L1MB8 LINE L1 -6 6172 6003 1888 164 0 0 chr10 70240456 70240768 -70075997 - AluSx SINE Alu 0 312 1 227 336 94 16 chr10 70240771 70240899 -70075866 - MIR SINE MIR -82 180 43 1138 172 10 0 chr10 70241112 70241304 -70075461 - L1MC4 LINE L1 -1036 7006 6813 1609 166 3 37 chr10 70241507 70241803 -70074962 + AluJb SINE Alu 3 288 -24 2207 96 0 7 chr10 70241881 70242173 -70074592 - AluSg SINE Alu -20 290 1 1443 184 56 0 chr10 70242274 70242581 -70074184 + AluJo SINE Alu 1 322 0 966 295 19 8 chr10 70243927 70244185 -70072580 + MIR SINE MIR 2 262 0 224 214 54 0 chr10 70244804 70244860 -70071905 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 192 238 0 0 chr10 70244860 70244902 -70071863 - L2 LINE L2 0 3313 3272 325 276 49 57 chr10 70246299 70246422 -70070343 - MIR SINE MIR -71 191 70 2380 70 0 13 chr10 70246454 70246768 -70069997 - AluY SINE Alu -1 310 1 233 254 225 42 chr10 70246851 70246993 -70069772 - MIR3 SINE MIR -20 188 21 2307 96 0 3 chr10 70248053 70248365 -70068400 - AluSq SINE Alu -2 311 1 1597 155 35 0 chr10 70248372 70248662 -70068103 - L1M4 LINE L1 -1404 4742 4443 189 313 87 35 chr10 70249882 70249997 -70066768 + L2 LINE L2 3075 3195 -77 1487 189 163 12 chr10 70250792 70251136 -70065629 - MSTD LTR MaLR 0 396 1 41 48 0 0 chr10 70251145 70251207 -70065558 + AT_rich Low_complexity Low_complexity 1 62 0 1914 164 0 0 chr10 70251228 70251538 -70065227 - AluJo SINE Alu -2 310 1 570 172 22 67 chr10 70251540 70251674 -70065091 - L1MB2 LINE L1 -43 6128 6001 752 267 176 44 chr10 70252065 70252634 -70064131 + L2 LINE L2 2062 2705 -609 1819 146 0 13 chr10 70252640 70252941 -70063824 + AluJb SINE Alu 1 297 -15 1295 184 10 71 chr10 70252951 70253260 -70063505 - L1MB8 LINE L1 -24 6154 5865 2130 95 3 23 chr10 70253490 70253794 -70062971 + AluSp SINE Alu 1 298 -15 324 0 0 0 chr10 70253860 70253896 -70062869 + (CA)n Simple_repeat Simple_repeat 2 37 0 482 288 248 0 chr10 70254286 70254484 -70062281 - L3 LINE CR1 -54 1523 1277 2294 73 3 0 chr10 70254740 70255043 -70061722 - AluY SINE Alu -7 304 1 240 35 0 0 chr10 70255569 70255598 -70061167 + (A)n Simple_repeat Simple_repeat 1 29 0 746 201 6 30 chr10 70256590 70256759 -70060006 - FRAM SINE Alu 0 166 2 535 306 91 52 chr10 70257267 70257742 -70059023 - L1MEc LINE L1 -5794 602 100 2128 113 0 0 chr10 70257742 70258042 -70058723 - AluSx SINE Alu -12 300 1 535 306 91 52 chr10 70258042 70258124 -70058641 - L1MEc LINE L1 -6296 100 23 763 188 11 54 chr10 70258780 70258887 -70057878 - MER104 DNA MER2_type -1718 180 83 2477 60 0 0 chr10 70258887 70259189 -70057576 - AluY SINE Alu -9 302 1 763 188 11 54 chr10 70259189 70259267 -70057498 - MER104 DNA MER2_type -1815 83 3 1573 235 52 2 chr10 70259675 70260080 -70056685 - L1MC4 LINE L1 -140 7902 7478 540 252 18 0 chr10 70260080 70260191 -70056574 - MER81 DNA DNA 0 114 2 2000 112 14 0 chr10 70260476 70260770 -70055995 - AluSc SINE Alu -11 298 1 2223 99 3 0 chr10 70261046 70261350 -70055415 - AluSp SINE Alu -8 305 1 437 282 72 71 chr10 70261662 70261949 -70054816 - L1ME2 LINE L1 -193 5971 5687 1600 179 0 23 chr10 70261949 70262256 -70054509 - AluJo SINE Alu -12 300 1 437 282 72 71 chr10 70262256 70262283 -70054482 - L1ME2 LINE L1 -477 5687 5662 1145 171 174 16 chr10 70262696 70262954 -70053811 - AluSg SINE Alu -1 299 1 1221 188 14 61 chr10 70263467 70263601 -70053164 + AluJo SINE Alu 1 140 -172 1805 102 0 4 chr10 70263601 70263855 -70052910 - AluSc SINE Alu -18 291 39 1221 188 14 61 chr10 70263855 70264013 -70052752 + AluJo SINE Alu 140 279 -33 367 161 25 37 chr10 70264015 70264096 -70052669 + FLAM_A SINE Alu 54 133 0 881 245 30 34 chr10 70264096 70264333 -70052432 + MIR SINE MIR 20 255 -7 23 33 0 0 chr10 70264647 70264677 -70052088 + AT_rich Low_complexity Low_complexity 1 30 0 395 238 7 56 chr10 70264942 70264992 -70051773 - L1ME LINE L1 -392 5729 5678 1696 171 0 13 chr10 70264992 70265290 -70051475 - AluJo SINE Alu -18 294 1 395 238 7 56 chr10 70265290 70265382 -70051383 - L1ME LINE L1 -443 5678 5594 1899 130 3 32 chr10 70265453 70265761 -70051004 + AluSx SINE Alu 1 299 -13 22 35 0 0 chr10 70266182 70266211 -70050554 + AT_rich Low_complexity Low_complexity 1 29 0 1629 172 4 0 chr10 70266805 70267099 -70049666 - AluJo SINE Alu 0 307 13 1551 186 3 7 chr10 70268634 70268925 -70047840 - AluJo SINE Alu -22 290 1 1535 171 4 11 chr10 70269077 70269384 -70047381 - AluJo SINE Alu 0 310 6 1541 202 0 13 chr10 70270769 70271081 -70045684 - AluJb SINE Alu -4 308 1 2265 82 0 0 chr10 70271089 70271381 -70045384 - AluSc SINE Alu -17 292 1 2349 80 0 0 chr10 70272624 70272925 -70043840 + AluSx SINE Alu 1 301 -11 956 147 13 0 chr10 70272976 70273132 -70043633 - AluJb SINE Alu -20 292 135 681 162 43 8 chr10 70273532 70273649 -70043116 + FLAM_C SINE Alu 7 127 -16 1869 143 10 0 chr10 70273865 70274158 -70042607 - AluSx SINE Alu -16 296 1 949 159 0 0 chr10 70274470 70274615 -70042150 - FRAM SINE Alu -20 156 12 2216 92 0 3 chr10 70274629 70274922 -70041843 - AluSx SINE Alu -20 292 1 279 0 0 0 chr10 70275098 70275129 -70041636 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 323 271 56 9 chr10 70275671 70275778 -70040987 - MIR SINE MIR -118 144 33 2292 82 0 0 chr10 70275814 70276108 -70040657 + AluSg SINE Alu 1 294 -16 370 137 0 0 chr10 70276301 70276352 -70040413 - MER66B LTR ERV1 -141 345 295 1522 154 51 17 chr10 70276410 70276703 -70040062 - AluJb SINE Alu -9 303 1 470 267 192 0 chr10 70277268 70277414 -70039351 + MER5A DNA MER1_type 10 183 -6 28 48 0 0 chr10 70278136 70278178 -70038587 + AT_rich Low_complexity Low_complexity 1 42 0 207 88 0 0 chr10 70278249 70278283 -70038482 + (TG)n Simple_repeat Simple_repeat 2 35 0 441 280 83 24 chr10 70278512 70278680 -70038085 - L2 LINE L2 0 3313 3136 338 240 160 10 chr10 70278665 70278765 -70038000 + L2 LINE L2 3155 3269 -3 * 243 289 133 16 chr10 70278989 70279117 -70037648 + MIR SINE MIR 103 245 -17 1648 172 7 7 chr10 70279754 70280056 -70036709 + AluJo SINE Alu 1 302 -10 1855 152 0 0 chr10 70280924 70281213 -70035552 + AluJb SINE Alu 1 289 -23 383 267 106 39 chr10 70281252 70281507 -70035258 - HAL1 LINE L1 -1542 965 694 408 184 13 0 chr10 70281508 70281607 -70035158 - AluSg/x SINE Alu 0 305 206 1305 89 5 45 chr10 70281609 70281811 -70034954 + AluSg SINE Alu 1 194 -116 1866 124 0 4 chr10 70281916 70282182 -70034583 - AluSx SINE Alu -46 266 2 1577 179 16 16 chr10 70282355 70282487 -70034278 + AluJo SINE Alu 3 134 -178 2327 63 7 3 chr10 70282487 70282787 -70033978 + AluY SINE Alu 1 301 -10 1577 179 16 16 chr10 70282787 70282961 -70033804 + AluJo SINE Alu 133 309 -3 842 165 0 15 chr10 70282977 70283097 -70033668 + FLAM_C SINE Alu 2 121 -181 402 39 0 0 chr10 70283097 70283149 -70033616 + (TG)n Simple_repeat Simple_repeat 2 53 0 842 165 0 15 chr10 70283149 70283161 -70033604 + FLAM_C SINE Alu 121 132 -170 565 318 122 14 chr10 70283571 70283785 -70032980 + MIR SINE MIR 8 244 -18 2061 120 3 0 chr10 70284146 70284445 -70032320 + AluSx SINE Alu 1 300 -12 933 217 43 4 chr10 70284457 70284687 -70032078 - L1MB3 LINE L1 -1 6182 5944 370 253 11 0 chr10 70284687 70284778 -70031987 + MIR SINE MIR 94 185 -77 2113 128 0 0 chr10 70285758 70286063 -70030702 + AluSx SINE Alu 1 305 -7 623 299 54 38 chr10 70286068 70286512 -70030253 - L1ME4a LINE L1 -3 6118 5668 2121 125 3 3 chr10 70286548 70286859 -70029906 + AluSx SINE Alu 1 311 -1 207 0 0 0 chr10 70287425 70287448 -70029317 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 285 284 63 0 chr10 70288268 70288363 -70028402 + MIR3 SINE MIR 60 160 -48 262 132 57 19 chr10 70288501 70288554 -70028211 + MIR3 SINE MIR 153 207 -1 213 39 0 0 chr10 70288588 70288614 -70028151 + (ATG)n Simple_repeat Simple_repeat 3 28 0 477 261 180 11 chr10 70288627 70288841 -70027924 - MIR SINE MIR -12 250 2 253 262 131 82 chr10 70289089 70289211 -70027554 + MER91B DNA MER1_type 2 129 -61 280 233 174 0 chr10 70289229 70289315 -70027450 + MER91B DNA MER1_type 90 190 0 2371 117 117 8 chr10 70289686 70290070 -70026695 - MSTA LTR MaLR -2 426 1 506 171 0 23 chr10 70290113 70290201 -70026564 - MER58B DNA MER1_type -1 340 255 268 312 143 19 chr10 70291056 70291210 -70025555 - MIR SINE MIR -80 182 10 2170 222 74 34 chr10 70291582 70292312 -70024453 - L1MC5 LINE L1 -115 7846 7088 258 273 108 43 chr10 70292288 70292519 -70024246 - L1ME LINE L1 -265 5856 5611 * 1762 140 0 101 chr10 70293186 70293522 -70023243 - AluJb SINE Alu 0 302 1 366 301 23 74 chr10 70293662 70293838 -70022927 + MIR SINE MIR 20 186 -76 363 276 115 62 chr10 70293931 70294022 -70022743 - L1ME4a LINE L1 -1 6120 6035 1692 100 115 0 chr10 70294022 70294282 -70022483 + AluSq SINE Alu 7 296 -17 363 276 115 62 chr10 70294282 70294321 -70022444 - L1ME4a LINE L1 -86 6035 6000 405 0 0 0 chr10 70294321 70294366 -70022399 + (TG)n Simple_repeat Simple_repeat 2 46 0 363 276 115 62 chr10 70294366 70294501 -70022264 - L1ME4a LINE L1 -121 6000 5874 1566 184 25 0 chr10 70294501 70294784 -70021981 - AluJo SINE Alu -16 296 7 363 276 115 62 chr10 70294784 70294889 -70021876 - L1ME4a LINE L1 -247 5874 5728 526 312 41 27 chr10 70296072 70296293 -70020472 + MIR SINE MIR 14 237 -25 1271 134 68 104 chr10 70296295 70296602 -70020163 + AluJo SINE Alu 1 296 -16 486 306 76 58 chr10 70297736 70298027 -70018738 - L3 LINE CR1 0 1577 1282 1507 200 6 19 chr10 70298285 70298600 -70018165 + AluJo SINE Alu 1 311 -1 330 47 62 31 chr10 70298605 70298669 -70018096 + GA-rich Low_complexity Low_complexity 1 66 0 2017 115 0 30 chr10 70298806 70299110 -70017655 + AluSx SINE Alu 1 295 -17 1767 157 3 19 chr10 70299255 70299568 -70017197 - AluJb SINE Alu -4 308 1 807 173 0 0 chr10 70300265 70300398 -70016367 - FLAM_A SINE Alu 0 133 1 2053 110 10 7 chr10 70300422 70300721 -70016044 + AluSx SINE Alu 1 300 -12 284 318 45 0 chr10 70300893 70301003 -70015762 + L2 LINE L2 3167 3281 -32 198 0 0 0 chr10 70301019 70301041 -70015724 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 224 396 65 7 chr10 70301160 70301299 -70015466 - L2 LINE L2 -40 3232 3086 1501 203 41 78 chr10 70301374 70301601 -70015164 - Charlie4a DNA MER1_type -1473 488 254 2254 90 0 3 chr10 70301601 70301900 -70014865 - AluY SINE Alu -13 298 1 1501 203 41 78 chr10 70301900 70301981 -70014784 - Charlie4a DNA MER1_type -1707 254 172 2172 114 3 0 chr10 70301981 70302287 -70014478 - AluSq SINE Alu -6 307 1 1501 203 41 78 chr10 70302287 70302440 -70014325 - Charlie4a DNA MER1_type -1789 172 43 1252 267 50 79 chr10 70302555 70303139 -70013626 - L1MCc LINE L1 -4681 2441 1842 2049 103 3 55 chr10 70303139 70303330 -70013435 - AluSx SINE Alu 0 312 113 222 37 0 0 chr10 70303330 70303357 -70013408 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1992 110 0 3 chr10 70303357 70303639 -70013126 - AluY SINE Alu -30 281 1 2049 103 3 55 chr10 70303639 70303775 -70012990 - AluSx SINE Alu -197 115 1 1252 267 50 79 chr10 70303775 70304260 -70012505 - L1MCc LINE L1 -5280 1842 1180 678 167 0 0 chr10 70304285 70304387 -70012378 + AluJ/FLAM SINE Alu 1 102 -210 30 27 0 0 chr10 70304397 70304434 -70012331 + AT_rich Low_complexity Low_complexity 1 37 0 1953 122 28 0 chr10 70304441 70304727 -70012038 + AluSx SINE Alu 3 296 -16 927 93 0 43 chr10 70305362 70305501 -70011264 + FLAM_C SINE Alu 1 133 -10 21 0 0 0 chr10 70305501 70305522 -70011243 + AT_rich Low_complexity Low_complexity 1 21 0 831 266 90 67 chr10 70305534 70305621 -70011144 - L1M4 LINE L1 -3271 2875 2792 876 236 103 0 chr10 70305621 70305824 -70010941 - MER58A DNA MER1_type 0 224 1 831 266 90 67 chr10 70305824 70305931 -70010834 - L1M4 LINE L1 -3354 2792 2689 2281 97 3 3 chr10 70305931 70306242 -70010523 + AluSq SINE Alu 1 311 -2 243 88 0 0 chr10 70306242 70306276 -70010489 + (TA)n Simple_repeat Simple_repeat 2 35 0 831 266 90 67 chr10 70306276 70306500 -70010265 - L1M4 LINE L1 -3456 2690 2445 2101 117 0 0 chr10 70306500 70306791 -70009974 + AluSx SINE Alu 1 291 -21 251 191 56 22 chr10 70306812 70306901 -70009864 + (TTAA)n Simple_repeat Simple_repeat 2 93 0 538 276 38 5 chr10 70307199 70307409 -70009356 - HAL1 LINE L1 -864 1643 1427 1872 142 3 3 chr10 70307409 70307711 -70009054 + AluJb SINE Alu 1 302 -10 2259 82 3 0 chr10 70307875 70308169 -70008596 + AluSq SINE Alu 1 295 -18 2069 85 34 20 chr10 70310246 70310539 -70006226 - AluY SINE Alu -14 297 1 2010 170 31 11 chr10 70310596 70310954 -70005811 + MLT1A1 LTR MaLR 1 365 0 1047 166 11 0 chr10 70311267 70311448 -70005317 - MER5A DNA MER1_type -4 185 3 216 135 0 0 chr10 70311536 70311573 -70005192 + (TCC)n Simple_repeat Simple_repeat 3 39 0 288 180 70 60 chr10 70311712 70311812 -70004953 + L2 LINE L2 3117 3217 -96 227 347 144 0 chr10 70312175 70312348 -70004417 + MIR SINE MIR 33 230 -32 205 274 0 0 chr10 70312363 70312414 -70004351 + (CAT)n Simple_repeat Simple_repeat 1 51 0 2238 80 6 29 chr10 70312957 70313269 -70003496 + AluSq SINE Alu 1 305 -8 1855 135 0 25 chr10 70313287 70313606 -70003159 + AluJo SINE Alu 1 311 -1 2087 106 0 55 chr10 70313621 70313951 -70002814 + AluSx SINE Alu 1 312 0 298 235 139 52 chr10 70313985 70314100 -70002665 - MIR3 SINE MIR -34 174 50 674 215 154 30 chr10 70314282 70314515 -70002250 + MIR SINE MIR 1 262 0 650 182 0 0 chr10 70314654 70314764 -70002001 + AluJo/FLAM SINE Alu 1 110 -202 889 209 0 0 chr10 70314766 70314924 -70001841 - AluJo/FRAM SINE Alu -7 295 138 1345 97 0 0 chr10 70314927 70315112 -70001653 - AluY SINE Alu 0 311 127 704 95 0 0 chr10 70315216 70315311 -70001454 + AluY SINE Alu 194 288 -23 1658 173 14 0 chr10 70316096 70316391 -70000374 + AluJo SINE Alu 1 299 -13 2057 89 7 26 chr10 70316432 70316735 -70000030 - AluSq SINE Alu -16 297 1 268 86 0 0 chr10 70316894 70316929 -69999836 - THE1C LTR MaLR 0 428 394 2221 108 11 52 chr10 70316994 70317356 -69999409 - THE1C LTR MaLR -28 347 1 1416 174 36 12 chr10 70317390 70317686 -69999079 + L1MB7 LINE L1 5897 6163 -21 1470 158 0 53 chr10 70317745 70318030 -69998735 + AluJo SINE Alu 9 278 -34 775 181 6 104 chr10 70318210 70318392 -69998373 + FRAM SINE Alu 2 165 -1 186 43 0 0 chr10 70318664 70318687 -69998078 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1851 83 8 4 chr10 70318694 70318946 -69997819 - AluSx SINE Alu -39 273 21 2042 129 3 3 chr10 70319342 70319652 -69997113 - AluSx SINE Alu -2 310 1 788 138 7 43 chr10 70319662 70319800 -69996965 - FLAM_C SINE Alu 0 133 1 2034 129 0 3 chr10 70320370 70320680 -69996085 - AluSq SINE Alu -4 309 1 560 251 48 24 chr10 70321356 70321523 -69995242 - MIR SINE MIR -81 181 11 1767 170 0 7 chr10 70322000 70322306 -69994459 - AluJo SINE Alu -8 304 1 752 224 149 113 chr10 70323423 70323785 -69992980 - MLT1H LTR MaLR 0 549 161 2581 39 0 0 chr10 70323785 70324094 -69992671 - AluY SINE Alu -2 309 1 752 224 149 113 chr10 70324094 70324261 -69992504 - MLT1H LTR MaLR -388 161 1 1650 148 31 10 chr10 70324374 70324508 -69992257 + AluJb SINE Alu 2 132 -180 1888 122 3 21 chr10 70324508 70324816 -69991949 + AluSx SINE Alu 1 303 0 1650 148 31 10 chr10 70324816 70324945 -69991820 + AluJb SINE Alu 132 275 -37 276 30 0 0 chr10 70324945 70324978 -69991787 + (GA)n Simple_repeat Simple_repeat 2 34 0 1650 148 31 10 chr10 70324978 70325003 -69991762 + AluJb SINE Alu 275 298 -14 427 335 58 21 chr10 70325174 70325362 -69991403 + L2 LINE L2 3074 3268 -4 279 272 68 48 chr10 70326545 70326692 -69990073 - L2 LINE L2 -225 3047 2898 2561 142 11 32 chr10 70326933 70327376 -69989389 - Tigger2a DNA MER2_type 0 434 1 784 221 24 124 chr10 70327449 70327545 -69989220 + Charlie7 DNA MER1_type 242 346 -2266 2115 125 0 3 chr10 70327545 70327850 -69988915 + AluSx SINE Alu 1 304 -8 784 221 24 124 chr10 70327850 70327861 -69988904 + Charlie7 DNA MER1_type 346 357 -2255 2364 81 0 0 chr10 70327861 70328168 -69988597 + AluSq SINE Alu 1 307 -6 784 221 24 124 chr10 70328168 70328281 -69988484 + Charlie7 DNA MER1_type 357 422 -2190 1522 197 14 7 chr10 70328281 70328576 -69988189 + AluJo SINE Alu 4 300 -12 784 221 24 124 chr10 70328576 70328683 -69988082 + Charlie7 DNA MER1_type 422 538 -2074 1141 153 0 0 chr10 70328802 70328991 -69987774 - AluSg/x SINE Alu -3 307 119 985 206 103 64 chr10 70328991 70329054 -69987711 - L1ME3 LINE L1 -2 6160 6101 1527 160 14 27 chr10 70329054 70329205 -69987560 - AluJo SINE Alu -22 290 138 331 19 19 38 chr10 70329205 70329258 -69987507 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2144 72 7 0 chr10 70329258 70329535 -69987230 - AluSg SINE Alu -31 279 1 2035 125 0 0 chr10 70329535 70329831 -69986934 - AluSg SINE Alu -13 297 1 1527 160 14 27 chr10 70329831 70329971 -69986794 - AluJo SINE Alu -171 141 1 985 206 103 64 chr10 70329971 70330237 -69986528 - L1ME3 LINE L1 -61 6101 5818 2599 165 25 85 chr10 70330724 70330834 -69985931 + L1M4 LINE L1 4218 4333 -1813 2183 94 0 10 chr10 70330834 70331133 -69985632 + AluSg1 SINE Alu 1 296 -13 2599 165 25 85 chr10 70331133 70331213 -69985552 + L1M4 LINE L1 4333 4416 -1730 1880 118 0 0 chr10 70331213 70331475 -69985290 + AluSx SINE Alu 51 312 0 2599 165 25 85 chr10 70331475 70331835 -69984930 + L1M4 LINE L1 4416 4725 -1421 2150 103 0 3 chr10 70331835 70332126 -69984639 + AluSq SINE Alu 1 290 -23 2599 165 25 85 chr10 70332126 70332244 -69984521 + L1M4 LINE L1 4725 4848 -1298 998 64 0 0 chr10 70332251 70332376 -69984389 - AluY SINE Alu -17 294 170 335 125 18 0 chr10 70332379 70332435 -69984330 + L1M4 LINE L1 4853 4909 -1237 1085 162 0 33 chr10 70332436 70332646 -69984119 + AluJb SINE Alu 99 301 -11 240 330 19 19 chr10 70332681 70332784 -69983981 - L2 LINE L2 -770 2544 2442 475 239 58 14 chr10 70332804 70332942 -69983823 + L2 LINE L2 2954 3097 -216 412 216 0 36 chr10 70332947 70333058 -69983707 - MLT1J LTR MaLR 0 511 405 250 280 106 20 chr10 70333258 70333381 -69983384 - MIR SINE MIR -67 141 30 2287 81 0 7 chr10 70333994 70334289 -69982476 + AluSc SINE Alu 1 293 -16 180 269 15 30 chr10 70335683 70335750 -69981015 + MIR3 SINE MIR 11 76 -132 2246 89 3 0 chr10 70336349 70336651 -69980114 - AluSp SINE Alu -10 303 1 2247 78 3 16 chr10 70336798 70337105 -69979660 - AluSq SINE Alu -10 303 1 588 195 149 7 chr10 70337221 70337375 -69979390 - MIR SINE MIR -77 185 10 211 265 31 82 chr10 70337484 70337582 -69979183 + MIR SINE MIR 120 212 -50 516 150 0 0 chr10 70338836 70338949 -69977816 + (TG)n Simple_repeat Simple_repeat 2 114 0 393 245 126 28 chr10 70339992 70340135 -69976630 + MIR SINE MIR 35 191 -71 38 0 0 20 chr10 70340393 70340419 -69976346 + AT_rich Low_complexity Low_complexity 1 27 -21 2092 131 0 10 chr10 70340419 70340710 -69976055 - AluSx SINE Alu -24 288 1 38 0 0 20 chr10 70340710 70340732 -69976033 + AT_rich Low_complexity Low_complexity 27 48 0 811 164 0 0 chr10 70340732 70340848 -69975917 - FLAM_C SINE Alu -22 121 6 1853 178 3 0 chr10 70341317 70341621 -69975144 - AluJb SINE Alu -7 305 1 1913 147 39 0 chr10 70341630 70341916 -69974849 - AluJb SINE Alu -15 297 1 1988 95 16 0 chr10 70342060 70342313 -69974452 + AluSx SINE Alu 35 291 -21 318 67 0 0 chr10 70342323 70342368 -69974397 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 251 260 195 13 chr10 70342567 70342721 -69974044 - L2 LINE L2 -231 3041 2860 244 338 69 14 chr10 70342757 70342902 -69973863 - L2 LINE L2 -557 2757 2605 208 286 0 16 chr10 70342984 70343047 -69973718 + L2 LINE L2 3211 3272 0 462 244 284 5 chr10 70343414 70343615 -69973150 - MIR SINE MIR 0 262 6 234 206 162 0 chr10 70343740 70343808 -69972957 - MIR3 SINE MIR -18 190 112 186 167 0 0 chr10 70344214 70344250 -69972515 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 345 145 0 0 chr10 70344271 70344333 -69972432 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 221 272 233 10 chr10 70344337 70344440 -69972325 - L2 LINE L2 0 3272 3147 881 112 64 0 chr10 70346701 70346826 -69969939 - FLAM_C SINE Alu -10 133 1 970 187 84 52 chr10 70347019 70347185 -69969580 - LTR29 LTR ERV1 0 644 485 2007 105 94 7 chr10 70347185 70347471 -69969294 - AluSx SINE Alu -1 311 1 970 187 84 52 chr10 70347471 70347600 -69969165 - LTR29 LTR ERV1 -159 485 362 2397 86 7 0 chr10 70347600 70347892 -69968873 - AluSg SINE Alu -14 296 3 970 187 84 52 chr10 70347892 70348039 -69968726 - LTR29 LTR ERV1 -282 362 137 384 236 30 9 chr10 70348021 70348137 -69968628 - MER34 LTR ERV1 -416 126 11 * 2388 81 20 0 chr10 70348689 70348986 -69967779 + AluSq SINE Alu 1 303 -10 463 259 19 50 chr10 70349317 70349516 -69967249 + MIR SINE MIR 6 192 -65 1620 122 122 32 chr10 70399784 70400128 -69916637 - THE1C LTR MaLR 0 375 1 195 288 12 62 chr10 70400401 70400481 -69916284 + L2 LINE L2 3200 3275 -38 207 289 0 36 chr10 70401877 70401960 -69914805 + C-rich Low_complexity Low_complexity 2 81 0 * 236 322 11 33 chr10 70401901 70402084 -69914681 + CT-rich Low_complexity Low_complexity 1 179 0 225 202 12 24 chr10 70402114 70402198 -69914567 + CT-rich Low_complexity Low_complexity 1 83 0 245 206 0 16 chr10 70403519 70403582 -69913183 + T-rich Low_complexity Low_complexity 4 65 0 2819 245 48 25 chr10 70403588 70404335 -69912430 - L1PA13 LINE L1 -4861 1926 1163 214 204 37 0 chr10 70405066 70405120 -69911645 + MIR SINE MIR 86 141 -67 511 224 77 14 chr10 70405461 70405604 -69911161 + MER3 DNA MER1_type 57 208 -1 231 235 20 0 chr10 70405568 70405619 -69911146 - MER3 DNA MER1_type -124 85 34 * 1705 143 75 0 chr10 70405691 70405956 -69910809 + AluSc SINE Alu 1 285 -24 1048 105 0 0 chr10 70406757 70406890 -69909875 - FLAM_C SINE Alu -10 133 1 1412 144 7 15 chr10 70406890 70407160 -69909605 + L1MB8 LINE L1 5906 6173 -5 2299 134 15 41 chr10 70407620 70407717 -69909048 + L1MB4 LINE L1 5729 5827 -353 2350 109 0 3 chr10 70407717 70408021 -69908744 + AluSq SINE Alu 1 303 -10 2299 134 15 41 chr10 70408021 70408038 -69908727 + L1MB4 LINE L1 5827 5843 -337 825 205 0 24 chr10 70408038 70408204 -69908561 + FRAM SINE Alu 4 165 -1 2299 134 15 41 chr10 70408204 70408552 -69908213 + L1MB4 LINE L1 5843 6180 0 1827 99 12 4 chr10 70410949 70411192 -69905573 - AluSp SINE Alu -7 306 62 29 0 0 0 chr10 70411360 70411389 -69905376 + AT_rich Low_complexity Low_complexity 1 29 0 790 168 8 0 chr10 70411389 70411514 -69905251 - FLAM_C SINE Alu -7 126 1 21 36 0 0 chr10 70411563 70411591 -69905174 + AT_rich Low_complexity Low_complexity 1 28 0 316 297 29 36 chr10 70412386 70412524 -69904241 + L3 LINE CR1 951 1087 -490 2036 150 0 0 chr10 70412530 70412816 -69903949 - AluJb SINE Alu -26 286 1 226 307 97 18 chr10 70412841 70412955 -69903810 + L3 LINE CR1 1385 1507 -70 1106 233 42 64 chr10 70413023 70413431 -69903334 + L1ME3A LINE L1 5766 6164 -6 184 261 159 14 chr10 70413438 70413507 -69903258 + L3b LINE CR1 1384 1462 -121 200 200 0 0 chr10 70414539 70414574 -69902191 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1231 160 191 0 chr10 70414732 70414963 -69901802 + AluJb SINE Alu 1 275 -37 2113 132 3 0 chr10 70414963 70415267 -69901498 - AluSx SINE Alu -7 305 1 622 203 47 20 chr10 70415267 70415415 -69901350 - MIR SINE MIR -38 224 73 221 320 21 10 chr10 70415616 70415713 -69901052 - MIR SINE MIR -87 121 24 193 174 22 0 chr10 70416037 70416083 -69900682 - L2 LINE L2 -19 3253 3207 259 274 85 52 chr10 70416445 70416598 -69900167 - MIR3 SINE MIR -21 187 30 2276 110 3 0 chr10 70418885 70419176 -69897589 - AluSx SINE Alu -20 292 1 623 304 11 5 chr10 70420497 70420688 -69896077 + MER46C DNA MER2_type 147 338 0 188 57 0 57 chr10 70420945 70420980 -69895785 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 1917 131 98 18 chr10 70421066 70421403 -69895362 - THE1B LTR MaLR 0 364 1 408 304 50 25 chr10 70421826 70421987 -69894778 - MER5B DNA MER1_type -1 177 13 2225 116 10 3 chr10 70421987 70422297 -69894468 - AluSx SINE Alu 0 312 1 2061 137 7 3 chr10 70422718 70423018 -69893747 - AluJo SINE Alu -11 301 1 365 282 39 19 chr10 70423870 70424026 -69892739 + L3 LINE CR1 1270 1428 -149 1042 226 13 4 chr10 70424126 70424356 -69892409 + MIR SINE MIR 9 240 -22 222 302 116 31 chr10 70424361 70424490 -69892275 - MIR SINE MIR -22 240 101 1296 162 65 16 chr10 70425416 70425651 -69891114 + AluJo SINE Alu 54 303 -9 186 43 0 0 chr10 70425651 70425674 -69891091 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1296 162 65 16 chr10 70425674 70425685 -69891080 + AluJo SINE Alu 303 312 0 291 246 77 112 chr10 70427422 70427707 -69889058 + L1M4 LINE L1 3995 4269 -1877 893 105 0 0 chr10 70427734 70427848 -69888917 - AluSq/x SINE Alu -198 114 1 21 0 0 0 chr10 70428273 70428294 -69888471 + AT_rich Low_complexity Low_complexity 1 21 0 245 89 89 18 chr10 70428372 70428428 -69888337 - L1MD3 LINE L1 -1 7994 7935 224 191 32 0 chr10 70428430 70428493 -69888272 + (TATG)n Simple_repeat Simple_repeat 2 66 0 250 303 28 0 chr10 70428505 70428614 -69888151 + L1M4 LINE L1 4381 4492 -1654 672 151 101 0 chr10 70429338 70429457 -69887308 + FLAM_C SINE Alu 2 132 -11 1463 159 67 7 chr10 70430149 70430419 -69886346 + AluJo SINE Alu 1 286 -26 1605 88 0 0 chr10 70430748 70430940 -69885825 - AluSq SINE Alu -115 198 7 250 269 75 0 chr10 70431085 70431178 -69885587 + L1ME4a LINE L1 6020 6119 -2 1960 125 59 7 chr10 70431200 70431488 -69885277 + AluJb SINE Alu 1 303 -9 764 156 8 0 chr10 70432149 70432271 -69884494 + FLAM_A SINE Alu 1 123 -10 1145 282 49 41 chr10 70432578 70433110 -69883655 - MLT1H LTR MaLR 0 549 14 230 271 271 47 chr10 70434202 70434438 -69882327 + L2 LINE L2 3023 3311 -2 193 244 0 0 chr10 70434511 70434552 -69882213 - L2 LINE L2 -90 3182 3142 202 273 91 11 chr10 70435137 70435225 -69881540 + MIR SINE MIR 54 148 -114 2213 96 10 7 chr10 70435594 70435912 -69880853 + AluSg SINE Alu 1 310 0 21 0 0 0 chr10 70436016 70436037 -69880728 + AT_rich Low_complexity Low_complexity 1 21 0 862 115 11 120 chr10 70436066 70436257 -69880508 + MER90 LTR ERV1 1 170 -405 * 952 191 19 74 chr10 70436251 70436388 -69880377 + MER90 LTR ERV1 370 513 -101 1684 163 11 0 chr10 70436388 70436652 -69880113 - AluJb SINE Alu -19 293 27 710 178 0 0 chr10 70436658 70436776 -69879989 - FLAM_C SINE Alu -15 118 1 952 191 19 74 chr10 70436776 70436888 -69879877 + MER90 LTR ERV1 518 612 -2 297 141 27 8 chr10 70436890 70436967 -69879798 - LTR37A LTR ERV1 -45 423 315 213 39 0 0 chr10 70437023 70437049 -69879716 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1544 179 7 52 chr10 70437243 70437551 -69879214 + AluJb SINE Alu 1 294 -18 380 347 56 3 chr10 70437649 70437937 -69878828 - L1MC4a LINE L1 -1881 5927 5625 2381 175 104 25 chr10 70439722 70439882 -69876883 + L1MB8 LINE L1 5148 5294 -884 2484 91 0 0 chr10 70439882 70440190 -69876575 + AluSg SINE Alu 1 308 -2 2381 175 104 25 chr10 70440190 70440730 -69876035 + L1MB8 LINE L1 5294 5914 -264 957 240 0 0 chr10 70440730 70440913 -69875852 - AluSg/x SINE Alu -11 301 119 685 169 8 15 chr10 70441056 70441186 -69875579 + FLAM_C SINE Alu 14 142 -1 2429 88 0 0 chr10 70441217 70441513 -69875252 + AluSx SINE Alu 1 296 -16 498 300 60 77 chr10 70441596 70442001 -69874764 + L1PB1 LINE L1 3106 3503 -2643 * 3694 181 43 30 chr10 70441990 70442190 -69874575 + L1MB7 LINE L1 5259 5455 -729 1814 174 23 0 chr10 70442190 70442489 -69874276 + AluJb SINE Alu 1 306 -6 3694 181 43 30 chr10 70442489 70442874 -69873891 + L1MB7 LINE L1 5455 5861 -323 1252 130 115 10 chr10 70442874 70442992 -69873773 + MER30 DNA MER1_type 1 105 -125 2306 112 3 0 chr10 70442992 70443287 -69873478 + AluSp SINE Alu 1 296 -17 1252 130 115 10 chr10 70443287 70443376 -69873389 + MER30 DNA MER1_type 105 230 0 3694 181 43 30 chr10 70443376 70443633 -69873132 + L1MB7 LINE L1 5861 6113 -71 3869 182 111 85 chr10 70443633 70445060 -69871705 - MER52A LTR ERV1 0 1755 1 385 127 0 0 chr10 70445068 70445131 -69871634 + L1MB8 LINE L1 6116 6178 0 625 291 91 53 chr10 70445182 70445381 -69871384 - MLT1J2 LTR MaLR -2 448 258 2739 84 14 41 chr10 70445381 70445798 -69870967 - L1PB2 LINE L1 -4 6147 5742 625 291 91 53 chr10 70445798 70445993 -69870772 - MLT1J2 LTR MaLR -192 258 39 1624 125 0 22 chr10 70446201 70446433 -69870332 + AluSx SINE Alu 1 227 -85 378 0 0 0 chr10 70446457 70446499 -69870266 + (TC)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 70446498 70446537 -69870228 + (TA)n Simple_repeat Simple_repeat 1 39 0 * 1956 159 7 0 chr10 70446994 70447295 -69869470 + AluJb SINE Alu 1 303 -9 686 236 10 15 chr10 70447375 70447570 -69869195 + L1PB1 LINE L1 3833 4026 -2120 5622 151 20 3 chr10 70447624 70449351 -69867414 + L1PB1 LINE L1 4398 6151 0 1628 176 37 9 chr10 70449362 70449686 -69867079 + MER21B LTR ERV1 529 861 -2 716 296 93 16 chr10 70449691 70450069 -69866696 + HAL1b LINE L1 313 719 -629 1721 181 0 7 chr10 70450378 70450676 -69866089 + AluJo SINE Alu 1 296 -16 1101 234 95 78 chr10 70450686 70451285 -69865480 + L1MC5 LINE L1 6549 7148 -813 371 315 63 16 chr10 70452009 70452136 -69864629 - L2 LINE L2 -3 3269 3137 1716 151 66 71 chr10 70452148 70452380 -69864385 - MLT1B LTR MaLR 0 390 159 2189 127 3 0 chr10 70452380 70452679 -69864086 + AluSq SINE Alu 1 300 -13 1716 151 66 71 chr10 70452679 70452838 -69863927 - MLT1B LTR MaLR -231 159 1 1005 210 65 5 chr10 70452874 70453088 -69863677 - Tigger5 DNA MER2_type -2096 227 1 1401 170 229 14 chr10 70453094 70453447 -69863318 - MLT1C LTR MaLR -38 429 1 1863 158 58 19 chr10 70453536 70453896 -69862869 - MLT1A2 LTR MaLR 0 374 1 533 266 126 28 chr10 70454105 70454319 -69862446 + MIR SINE MIR 13 247 -15 410 245 38 9 chr10 70454414 70454520 -69862245 - MER115 DNA AcHobo -263 430 322 306 269 124 38 chr10 70454603 70454789 -69861976 - L2 LINE L2 -1275 2039 1838 1528 119 0 0 chr10 70454822 70455049 -69861716 + L1PB2 LINE L1 5889 6115 -36 1270 67 0 11 chr10 70455052 70455232 -69861533 + (GAA)n Simple_repeat Simple_repeat 3 180 0 744 262 103 40 chr10 70455295 70455646 -69861119 - MLT1J LTR MaLR -44 467 95 255 98 49 0 chr10 70455636 70455677 -69861088 - Alu SINE Alu -5 296 254 * 599 151 0 0 chr10 70455677 70455763 -69861002 - AluSg/x SINE Alu -122 188 103 383 241 204 22 chr10 70456601 70456738 -69860027 + MER5A DNA MER1_type 18 179 -10 285 222 69 28 chr10 70456840 70456912 -69859853 - MER5C DNA MER1_type -204 120 46 1808 172 10 7 chr10 70457242 70457545 -69859220 + AluJb SINE Alu 1 304 -8 226 264 28 14 chr10 70457587 70457659 -69859106 + (TATG)n Simple_repeat Simple_repeat 2 74 0 470 233 107 85 chr10 70458766 70458858 -69857907 + MER113 DNA MER1_type? 19 107 -414 2404 95 3 0 chr10 70458858 70459162 -69857603 - AluSp SINE Alu -8 305 1 2094 109 22 0 chr10 70459172 70459476 -69857289 - AluSx SINE Alu 0 312 3 470 233 107 85 chr10 70459476 70459641 -69857124 + MER113 DNA MER1_type? 115 294 -227 752 95 0 29 chr10 70459666 70459771 -69856994 + FLAM_C SINE Alu 25 126 -17 186 133 0 0 chr10 70459771 70459801 -69856964 + (TAA)n Simple_repeat Simple_repeat 1 30 0 436 286 28 17 chr10 70459803 70459981 -69856784 + MER113 DNA MER1_type? 293 472 -49 277 273 74 70 chr10 70460327 70460569 -69856196 - L2 LINE L2 -20 3252 3010 510 178 58 111 chr10 70461106 70461177 -69855588 + MER20B DNA MER1_type 545 618 -165 2177 90 0 21 chr10 70461177 70461465 -69855300 + AluSg SINE Alu 1 282 -28 510 178 58 111 chr10 70461465 70461601 -69855164 + MER20B DNA MER1_type 618 741 -42 2025 167 3 0 chr10 70461871 70462182 -69854583 + AluSx SINE Alu 1 312 0 3740 141 34 18 chr10 70462252 70462552 -69854213 - L1MB3 LINE L1 -52 6131 5837 2340 102 3 13 chr10 70462552 70462866 -69853899 - AluSp SINE Alu -2 311 1 3740 141 34 18 chr10 70462866 70463244 -69853521 - L1MB3 LINE L1 -346 5837 5442 469 213 113 0 chr10 70463405 70463570 -69853195 + MIR SINE MIR 23 206 -56 838 247 202 28 chr10 70463713 70464353 -69852412 + L1ME4a LINE L1 5353 6103 -18 1940 156 3 7 chr10 70465110 70465411 -69851354 + AluJb SINE Alu 1 300 -12 461 248 38 30 chr10 70465616 70465749 -69851016 + MER94 DNA DNA 1 134 0 304 243 108 27 chr10 70465900 70466011 -69850754 + MIR SINE MIR 13 132 -130 457 110 123 0 chr10 70466074 70466147 -69850618 - AluJ/FLAM SINE Alu -229 83 2 298 183 42 14 chr10 70466702 70466773 -69849992 - Tigger5 DNA MER2_type 0 2323 2251 297 179 0 18 chr10 70466742 70466798 -69849967 - Tigger5 DNA MER2_type -2268 55 1 * 2155 107 0 0 chr10 70467881 70468152 -69848613 - AluSx SINE Alu -19 293 23 874 161 0 0 chr10 70468381 70468524 -69848241 - FLAM_C SINE Alu 0 143 1 1900 160 6 16 chr10 70469092 70469404 -69847361 + AluJo SINE Alu 1 309 -3 283 229 286 7 chr10 70469411 70469551 -69847214 - MIR SINE MIR -8 254 76 821 253 72 17 chr10 70469701 70469938 -69846827 + Charlie8 DNA MER1_type 27 276 -2141 1985 161 40 74 chr10 70470317 70470763 -69846002 - MSTB1 LTR MaLR 0 432 2 357 281 20 128 chr10 70471119 70471464 -69845301 - MARNA DNA Mariner -236 350 43 299 246 136 20 chr10 70471787 70471886 -69844879 + MIR SINE MIR 43 151 -61 229 385 0 0 chr10 70472566 70472675 -69844090 + CT-rich Low_complexity Low_complexity 4 112 0 902 90 0 8 chr10 70474355 70474488 -69842277 - FLAM_C SINE Alu 0 133 2 395 161 35 63 chr10 70474667 70474810 -69841955 + C-rich Low_complexity Low_complexity 5 143 0 1616 131 32 32 chr10 70475390 70475704 -69841061 + MER44D DNA MER2_type 2 585 -24 804 96 0 0 chr10 70475716 70475831 -69840934 + (TA)n Simple_repeat Simple_repeat 1 115 0 2005 148 7 13 chr10 70476122 70476426 -69840339 + AluJo SINE Alu 1 302 -10 1371 196 68 47 chr10 70476535 70476944 -69839821 + LTR47B LTR ERVL 1 418 -25 3061 183 20 79 chr10 70477129 70477723 -69839042 + LTR8 LTR ERV1 1 545 -146 2145 109 42 0 chr10 70477723 70478007 -69838758 - AluSq SINE Alu -17 296 1 3061 183 20 79 chr10 70478007 70478146 -69838619 + LTR8 LTR ERV1 545 691 0 245 157 14 100 chr10 70478335 70478405 -69838360 - MIR3 SINE MIR -36 172 109 393 176 214 30 chr10 70478473 70478604 -69838161 + MIR3 SINE MIR 25 179 -29 2039 107 4 0 chr10 70478719 70478982 -69837783 - AluSq SINE Alu -13 300 37 420 244 104 15 chr10 70479738 70479873 -69836892 - MIR SINE MIR -16 246 100 228 287 40 30 chr10 70480012 70480113 -69836652 - MIR SINE MIR -80 128 27 732 225 18 114 chr10 70480402 70480682 -69836083 + MIR SINE MIR 7 259 -3 222 203 0 51 chr10 70480706 70480765 -69836000 + (CATG)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr10 70480768 70480800 -69835965 + (CA)n Simple_repeat Simple_repeat 2 33 0 312 316 89 40 chr10 70481038 70481285 -69835480 + L1M2 LINE L1 1127 1385 -5464 221 298 12 36 chr10 70481693 70481777 -69834988 + MIR SINE MIR 45 126 -82 457 269 97 0 chr10 70482484 70482629 -69834136 - MIR3 SINE MIR -9 199 41 400 317 19 25 chr10 70483056 70483217 -69833548 + MIR SINE MIR 77 236 -26 404 234 0 32 chr10 70483267 70483361 -69833404 - MER5A DNA MER1_type -98 91 1 2258 104 7 7 chr10 70484694 70484993 -69831772 - AluSx SINE Alu -11 301 3 581 297 50 25 chr10 70485069 70485352 -69831413 - LTR16A LTR ERVL 0 450 161 1811 126 77 0 chr10 70486283 70486544 -69830221 - AluSg SINE Alu -29 281 1 492 224 77 14 chr10 70486632 70486775 -69829990 - MER3 DNA MER1_type -1 208 57 232 286 200 0 chr10 70487116 70487221 -69829544 - MIR SINE MIR -67 141 16 1820 213 77 11 chr10 70487729 70488184 -69828581 - Charlie4a DNA MER1_type 0 508 24 686 285 0 5 chr10 70489361 70489547 -69827218 - AluSq SINE Alu -127 186 2 236 146 0 0 chr10 70489659 70489707 -69827058 - Alu SINE Alu -7 295 248 406 119 0 0 chr10 70489708 70489767 -69826998 + AluSp/q SINE Alu 241 299 -14 2284 113 10 0 chr10 70490053 70490362 -69826403 - AluSx SINE Alu 0 312 1 939 215 69 0 chr10 70490630 70490863 -69825902 + L1MB4 LINE L1 4628 4876 -1270 2268 144 46 62 chr10 70491338 70491718 -69825047 + L1MB4 LINE L1 4862 5247 -931 2052 154 58 21 chr10 70491718 70492043 -69824722 - MER1B DNA MER1_type 0 337 1 2268 144 46 62 chr10 70492043 70492145 -69824620 + L1MB4 LINE L1 5247 5349 -829 1928 135 9 55 chr10 70492145 70492470 -69824295 - AluJb SINE Alu -2 310 1 2268 144 46 62 chr10 70492470 70492604 -69824161 + L1MB4 LINE L1 5349 5471 -707 1599 192 13 19 chr10 70492608 70492921 -69823844 - MLT2B2 LTR ERVL -8 507 197 24 32 0 0 chr10 70492923 70492954 -69823811 + AT_rich Low_complexity Low_complexity 1 31 0 * 455 200 0 0 chr10 70492944 70493039 -69823726 - AluSg/x SINE Alu 0 309 215 * 1124 84 0 24 chr10 70493031 70493109 -69823656 - AluSq SINE Alu -160 153 5 1484 151 0 0 chr10 70493109 70493321 -69823444 - AluSx SINE Alu -100 212 1 1395 108 10 0 chr10 70493325 70493529 -69823236 - MLT2B2 LTR ERVL -309 206 1 3563 159 4 40 chr10 70493547 70493872 -69822893 + L1MB4 LINE L1 5476 5811 -369 1935 155 24 0 chr10 70493872 70494168 -69822597 - AluJb SINE Alu -9 303 1 3563 159 4 40 chr10 70494168 70494517 -69822248 + L1MB4 LINE L1 5811 6125 -55 2353 76 17 0 chr10 70494517 70494805 -69821960 + AluSp SINE Alu 1 293 -20 3563 159 4 40 chr10 70494805 70494860 -69821905 + L1MB4 LINE L1 6125 6180 0 1752 152 10 24 chr10 70495117 70495414 -69821351 - AluJb SINE Alu -19 293 1 246 274 274 5 chr10 70495432 70495622 -69821143 - L1ME LINE L1 -281 5889 5649 2251 118 3 0 chr10 70495827 70496123 -69820642 + AluSg SINE Alu 1 297 -13 309 216 148 11 chr10 70496542 70496630 -69820135 - L2 LINE L2 -5 3267 3168 240 330 33 0 chr10 70497896 70497987 -69818778 - MIR SINE MIR -48 214 121 524 284 66 25 chr10 70498220 70498417 -69818348 + MIR SINE MIR 51 255 -7 181 184 0 0 chr10 70498524 70498562 -69818203 - L2 LINE L2 0 3313 3276 183 225 0 70 chr10 70498977 70499048 -69817717 + MIR SINE MIR 90 155 -107 1191 280 89 21 chr10 70499255 70499769 -69816996 - L2 LINE L2 -1116 2198 1650 3105 228 91 3 chr10 70499769 70500617 -69816148 + L1ME1 LINE L1 3199 4120 -2026 1692 188 15 51 chr10 70500634 70501044 -69815721 + L1ME1 LINE L1 4819 5213 -933 672 164 17 0 chr10 70501044 70501160 -69815605 + FLAM_C SINE Alu 3 120 -23 3591 212 55 24 chr10 70501170 70502113 -69814652 + L1ME1 LINE L1 5189 6161 -5 22 35 0 0 chr10 70502183 70502212 -69814553 + AT_rich Low_complexity Low_complexity 1 29 0 2284 72 16 6 chr10 70502454 70502772 -69813993 - L1PA7 LINE L1 -3 6151 5831 16674 75 9 7 chr10 70502772 70505187 -69811578 + L1P LINE L1 2948 5369 -777 699 216 125 0 chr10 70505695 70505871 -69810894 + MIR SINE MIR 1 198 -64 2566 78 3 0 chr10 70506077 70506386 -69810379 - AluSg SINE Alu 0 310 1 198 0 0 0 chr10 70506874 70506896 -69809869 + (A)n Simple_repeat Simple_repeat 1 22 0 474 236 9 0 chr10 70507987 70508097 -69808668 + MIR SINE MIR 58 168 -94 214 306 65 28 chr10 70508480 70508588 -69808177 + MIR3 SINE MIR 58 169 -39 256 267 36 109 chr10 70508674 70508839 -69807926 + MER20B DNA MER1_type 136 288 -495 645 194 14 29 chr10 70508841 70508980 -69807785 + FLAM_A SINE Alu 1 137 -5 1525 251 59 11 chr10 70508983 70509454 -69807311 + MER20B DNA MER1_type 290 783 0 427 145 26 0 chr10 70509503 70509579 -69807186 - MER5A DNA MER1_type -111 78 1 407 238 188 12 chr10 70510121 70510281 -69806484 - MIR SINE MIR -61 201 14 383 267 15 122 chr10 70510938 70511200 -69805565 + MIR SINE MIR 23 256 -6 693 266 34 6 chr10 70511525 70511702 -69805063 - L2 LINE L2 0 3313 3132 1962 150 0 45 chr10 70512492 70512845 -69803920 - MER1B DNA MER1_type 0 337 1 1102 283 42 5 chr10 70513212 70513594 -69803171 + L2 LINE L2 2170 2565 -749 180 0 0 0 chr10 70513594 70513614 -69803151 + (CCA)n Simple_repeat Simple_repeat 2 21 0 1221 227 124 38 chr10 70513700 70514127 -69802638 + MLT2B1 LTR ERVL 1 464 -56 580 231 82 77 chr10 70514200 70514408 -69802357 + LTR16A LTR ERVL 177 385 -65 885 243 205 8 chr10 70514428 70514990 -69801775 + L2 LINE L2 2606 3300 -13 225 0 0 0 chr10 70514990 70515015 -69801750 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 819 228 94 5 chr10 70515703 70515927 -69800838 + MIR SINE MIR 9 252 -10 362 218 55 18 chr10 70516399 70516509 -69800256 + L3 LINE CR1 1378 1491 -86 325 317 171 4 chr10 70516842 70517088 -69799677 - L2 LINE L2 -36 3277 2991 443 318 56 9 chr10 70517393 70517607 -69799158 + MIR SINE MIR 34 257 -5 436 256 34 32 chr10 70517993 70518151 -69798614 - MIR SINE MIR -25 237 82 459 0 0 0 chr10 70518176 70518227 -69798538 + (TTA)n Simple_repeat Simple_repeat 2 52 0 186 284 216 0 chr10 70518356 70518444 -69798321 + L3 LINE CR1 1360 1466 -111 226 355 28 28 chr10 70519193 70519334 -69797431 - MIR3 SINE MIR -51 157 17 296 270 108 27 chr10 70519404 70519515 -69797250 - MIR3 SINE MIR -54 154 35 281 222 74 0 chr10 70519894 70519975 -69796790 + MIR3 SINE MIR 101 187 -21 436 287 22 7 chr10 70520061 70520197 -69796568 + MIR SINE MIR 104 241 -21 193 323 32 0 chr10 70520388 70520481 -69796284 - MIR SINE MIR -84 124 29 1182 84 0 0 chr10 70520633 70520776 -69795989 + AluSq/x SINE Alu 1 143 -170 2476 76 0 0 chr10 70520776 70521077 -69795688 + AluY SINE Alu 1 301 -10 1829 166 14 3 chr10 70522885 70523180 -69793585 + AluJo SINE Alu 1 298 -14 1062 164 72 117 chr10 70523620 70523800 -69792965 - MER2 DNA MER2_type 0 344 185 2040 133 0 14 chr10 70523800 70524109 -69792656 - AluSx SINE Alu 0 305 1 1062 164 72 117 chr10 70524109 70524286 -69792479 - MER2 DNA MER2_type -159 185 2 4216 56 24 65 chr10 70524965 70526038 -69790727 + MER11A LTR ERVK 1 1266 0 351 301 148 28 chr10 70526330 70526546 -69790219 - L1ME4a LINE L1 0 6121 5880 186 302 93 0 chr10 70526674 70526760 -69790005 + MER5A DNA MER1_type 21 114 -75 193 318 15 0 chr10 70527220 70527286 -69789479 + MIR SINE MIR 77 143 -119 1091 154 10 41 chr10 70527928 70528123 -69788642 + AluJo SINE Alu 120 308 -4 234 132 0 0 chr10 70528465 70528503 -69788262 - MIR SINE MIR -150 112 75 677 325 78 11 chr10 70528620 70529066 -69787699 + L2 LINE L2 2457 2932 -382 331 252 138 24 chr10 70529179 70529302 -69787463 + L2 LINE L2 3159 3295 -18 285 246 63 19 chr10 70530055 70530193 -69786572 + MLT1K LTR MaLR 71 284 -304 2338 121 15 30 chr10 70530985 70531260 -69785505 + MLT1B LTR MaLR 1 270 -120 2535 66 0 0 chr10 70531260 70531582 -69785183 + AluY SINE Alu 1 311 0 2338 121 15 30 chr10 70531582 70531702 -69785063 + MLT1B LTR MaLR 270 390 0 341 289 39 8 chr10 70531741 70531869 -69784896 + MIR3 SINE MIR 10 141 -67 870 266 57 59 chr10 70532188 70532613 -69784152 + L2 LINE L2 2888 3311 -2 2357 114 0 0 chr10 70533550 70533858 -69782907 + AluSx SINE Alu 1 308 -4 1137 140 10 45 chr10 70534564 70534764 -69782001 - AluJo SINE Alu -3 309 117 633 308 48 25 chr10 70534793 70535150 -69781615 - L1M4 LINE L1 -1251 4895 4531 31 31 0 47 chr10 70535165 70535229 -69781536 + AT_rich Low_complexity Low_complexity 1 61 0 409 175 25 0 chr10 70537447 70537527 -69779238 + MIR SINE MIR 48 129 -79 515 169 22 0 chr10 70537889 70537978 -69778787 + AluJb SINE Alu 195 285 -27 184 176 0 103 chr10 70538362 70538430 -69778335 + L2 LINE L2 3196 3256 -16 535 269 102 69 chr10 70538580 70538885 -69777880 - L2 LINE L2 0 3272 2958 790 257 167 30 chr10 70539035 70539095 -69777670 - L2 LINE L2 0 3313 3263 950 201 91 143 chr10 70539095 70539259 -69777506 - Charlie1b DNA MER1_type -2238 523 352 1499 199 11 4 chr10 70539259 70539525 -69777240 + AluJb SINE Alu 1 268 -44 950 201 91 143 chr10 70539525 70539593 -69777172 - Charlie1b DNA MER1_type -2409 352 282 186 43 0 0 chr10 70539593 70539616 -69777149 + (GAAA)n Simple_repeat Simple_repeat 4 26 0 950 201 91 143 chr10 70539616 70539933 -69776832 - Charlie1b DNA MER1_type -2479 282 2 790 257 167 30 chr10 70539933 70540409 -69776356 - L2 LINE L2 -50 3263 2665 617 121 105 57 chr10 70540409 70540533 -69776232 - FLAM_A SINE Alu -3 130 1 790 257 167 30 chr10 70540533 70540702 -69776063 - L2 LINE L2 -648 2665 2521 356 261 143 54 chr10 70540925 70541128 -69775637 + L1MC4 LINE L1 7454 7674 -368 1461 240 132 74 chr10 70541138 70541308 -69775457 - MER21B LTR ERV1 -47 816 657 1252 137 0 247 chr10 70541308 70541688 -69775077 + AluJb SINE Alu 1 286 -26 1461 240 132 74 chr10 70541688 70542064 -69774701 - MER21B LTR ERV1 -206 657 211 189 74 0 0 chr10 70542064 70542091 -69774674 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1461 240 132 74 chr10 70542091 70542310 -69774455 - MER21B LTR ERV1 -652 211 6 256 331 80 33 chr10 70542326 70542628 -69774137 + L1MC4 LINE L1 7727 8042 0 342 0 0 0 chr10 70543475 70543513 -69773252 + (TG)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr10 70543512 70543533 -69773232 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 * 1125 128 0 0 chr10 70543537 70543686 -69773079 - FRAM SINE Alu -30 146 1 276 294 32 24 chr10 70544479 70544605 -69772160 + MER113 DNA MER1_type? 1 127 -394 398 248 28 28 chr10 70544775 70544916 -69771849 - MIR3 SINE MIR -48 160 20 344 304 44 6 chr10 70545480 70545638 -69771127 + MIR SINE MIR 93 256 -6 203 319 14 0 chr10 70546378 70546447 -69770318 + MIR3 SINE MIR 115 184 -24 189 345 47 47 chr10 70546518 70546666 -69770099 - L3b LINE CR1 -141 1442 1295 1105 255 123 19 chr10 70546887 70547310 -69769455 - MLT1D LTR MaLR -8 497 31 2475 81 3 0 chr10 70547324 70547621 -69769144 - AluSx SINE Alu -14 298 1 260 192 39 0 chr10 70548454 70548506 -69768259 + MER5B DNA MER1_type 3 56 -122 2537 73 0 13 chr10 70548514 70548829 -69767936 + AluY SINE Alu 1 311 0 1615 157 20 68 chr10 70548848 70549142 -69767623 + AluJb SINE Alu 1 280 -32 238 241 17 0 chr10 70549161 70549219 -69767546 + MER5A DNA MER1_type 63 121 -68 269 235 141 0 chr10 70549919 70550004 -69766761 + MIR SINE MIR 96 192 -70 262 320 72 20 chr10 70550048 70550201 -69766564 - MIR SINE MIR -8 254 94 486 0 0 0 chr10 70551079 70551133 -69765632 + (CATCT)n Simple_repeat Simple_repeat 3 56 0 194 196 36 36 chr10 70551334 70551390 -69765375 - MIR SINE MIR -71 137 82 712 257 164 47 chr10 70551495 70551903 -69764862 + L2 LINE L2 2857 3312 -1 197 125 0 21 chr10 70552010 70552058 -69764707 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 317 209 77 0 chr10 70552355 70552446 -69764319 + MIR3 SINE MIR 107 204 -4 377 306 31 19 chr10 70552699 70552859 -69763906 + HAL1b LINE L1 1187 1348 0 489 294 44 6 chr10 70553064 70553224 -69763541 + MIR3 SINE MIR 36 201 -7 595 261 226 0 chr10 70553278 70553477 -69763288 - MIR SINE MIR -14 248 5 287 290 58 29 chr10 70553871 70554009 -69762756 - L2 LINE L2 -6 3266 3125 1179 205 17 27 chr10 70554359 70554652 -69762113 - MER113 DNA MER1_type? -109 412 123 259 128 0 0 chr10 70554654 70554693 -69762072 + LTR56 LTR ERV1 349 387 -58 2105 142 3 0 chr10 70554763 70555058 -69761707 + AluSx SINE Alu 1 296 -16 21 57 0 0 chr10 70555063 70555098 -69761667 + AT_rich Low_complexity Low_complexity 1 35 0 651 232 54 58 chr10 70555157 70555381 -69761384 + L1ME3A LINE L1 5933 6155 -15 295 250 74 9 chr10 70555372 70555480 -69761285 + L1MC4a LINE L1 5598 5712 -2096 * 685 104 35 28 chr10 70555486 70555630 -69761135 + GA-rich Low_complexity Low_complexity 1 145 0 364 284 47 16 chr10 70555636 70555826 -69760939 + L1MC4a LINE L1 5723 5918 -1890 1891 116 48 0 chr10 70555976 70556244 -69760521 - AluSc SINE Alu -5 304 24 1882 171 27 0 chr10 70556317 70556615 -69760150 - AluJb SINE Alu -6 306 1 2128 127 3 0 chr10 70556623 70556914 -69759851 - AluSx SINE Alu -20 292 1 234 432 0 8 chr10 70557552 70557670 -69759095 - MIR SINE MIR -64 144 28 200 237 0 0 chr10 70557780 70557818 -69758947 + MER5B DNA MER1_type 1 38 -140 274 256 122 0 chr10 70558106 70558188 -69758577 - MIR SINE MIR -84 124 33 431 305 116 0 chr10 70558539 70558703 -69758062 - MIR SINE MIR 0 262 80 274 170 57 0 chr10 70558705 70558758 -69758007 + U6 snRNA snRNA 1 56 -51 31 0 0 0 chr10 70558761 70558792 -69757973 + AT_rich Low_complexity Low_complexity 1 31 0 230 298 32 11 chr10 70558973 70559067 -69757698 - MIR SINE MIR -77 131 36 1859 127 23 17 chr10 70560284 70560584 -69756181 + AluJb SINE Alu 1 302 -10 2318 99 0 13 chr10 70560584 70560898 -69755867 + AluSx SINE Alu 1 310 -2 1930 169 0 13 chr10 70561441 70561754 -69755011 + AluJo SINE Alu 1 309 -3 2312 108 0 0 chr10 70561851 70562147 -69754618 + AluSx SINE Alu 1 296 -16 434 283 36 22 chr10 70562835 70562973 -69753792 + MER5B DNA MER1_type 11 150 -28 1984 146 10 0 chr10 70562976 70563278 -69753487 - AluSx SINE Alu -5 307 3 200 209 0 23 chr10 70563282 70563325 -69753440 - MER5B DNA MER1_type -136 42 1 403 221 214 14 chr10 70563408 70563548 -69753217 + MER63A DNA MER1_type 1 168 -42 257 214 179 0 chr10 70564218 70564302 -69752463 + MIR3 SINE MIR 110 208 0 253 333 12 0 chr10 70564320 70564404 -69752361 - L2 LINE L2 -10 3303 3219 1793 151 17 23 chr10 70564504 70564803 -69751962 + AluJo SINE Alu 12 308 -4 1557 280 97 70 chr10 70564845 70566004 -69750761 - L2 LINE L2 -337 2977 1788 2484 59 0 30 chr10 70566115 70566419 -69750346 - AluY SINE Alu -16 295 1 949 256 214 15 chr10 70566423 70566880 -69749885 + MLT1H1 LTR MaLR 3 550 -5 2131 125 10 0 chr10 70566893 70567188 -69749577 - AluSg SINE Alu -11 299 2 21 0 0 0 chr10 70567199 70567220 -69749545 + AT_rich Low_complexity Low_complexity 1 21 0 797 159 0 8 chr10 70567402 70567534 -69749231 + FLAM_C SINE Alu 3 133 0 391 165 0 31 chr10 70567540 70567637 -69749128 + GA-rich Low_complexity Low_complexity 5 98 0 212 256 141 16 chr10 70567722 70567828 -69748937 - MIR SINE MIR -37 225 97 2286 98 27 0 chr10 70567851 70568146 -69748619 + AluY SINE Alu 1 303 -8 307 242 10 40 chr10 70568413 70568512 -69748253 + MER103 DNA DNA 61 156 -10 2201 118 13 7 chr10 70569956 70570261 -69746504 + AluSx SINE Alu 1 307 -5 384 22 0 0 chr10 70570348 70570393 -69746372 + (TG)n Simple_repeat Simple_repeat 1 45 0 239 330 36 9 chr10 70570757 70570869 -69745896 - MIR3 SINE MIR -22 186 72 1986 128 0 60 chr10 70571144 70571463 -69745302 - AluSx SINE Alu -10 302 3 2080 120 0 11 chr10 70574417 70574700 -69742065 + AluSg SINE Alu 1 280 -30 7849 154 144 17 chr10 70574704 70576207 -69740558 + MER52A LTR ERV1 62 1755 0 2118 128 120 5 chr10 70576328 70576711 -69740054 + MSTA LTR MaLR 2 428 0 2263 204 22 81 chr10 70576712 70577426 -69739339 + L1MA9 LINE L1 5611 6282 -30 935 104 0 8 chr10 70577442 70577559 -69739206 + FLAM_C SINE Alu 1 118 -184 369 0 0 0 chr10 70577559 70577600 -69739165 + (CA)n Simple_repeat Simple_repeat 2 42 0 935 104 0 8 chr10 70577600 70577616 -69739149 + FLAM_C SINE Alu 118 133 -169 1992 142 3 40 chr10 70578295 70578619 -69738146 + AluSx SINE Alu 1 312 0 257 304 49 36 chr10 70578950 70579174 -69737591 + L1M4 LINE L1 2131 2357 -3789 2005 144 23 0 chr10 70579185 70579490 -69737275 + AluJb SINE Alu 1 312 0 1051 153 6 0 chr10 70579556 70579713 -69737052 + AluJo SINE Alu 9 166 -146 577 155 0 0 chr10 70579714 70579817 -69736948 + AluSg/x SINE Alu 209 311 -1 682 322 53 45 chr10 70579828 70580059 -69736706 + L1M4 LINE L1 2426 2654 -3492 1844 136 0 60 chr10 70580059 70580360 -69736405 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr10 70580364 70580385 -69736380 + (TAA)n Simple_repeat Simple_repeat 2 22 0 682 322 53 45 chr10 70580385 70580545 -69736220 + L1M4 LINE L1 2656 2825 -3321 1792 160 7 33 chr10 70580545 70580680 -69736085 + AluJo SINE Alu 1 138 -174 2539 70 0 10 chr10 70580680 70580994 -69735771 + AluY SINE Alu 1 311 0 1792 160 7 33 chr10 70580994 70581158 -69735607 + AluJo SINE Alu 138 292 -20 524 246 53 39 chr10 70581175 70581382 -69735383 + HAL1 LINE L1 2298 2507 0 2416 93 10 6 chr10 70581423 70581735 -69735030 - AluSq SINE Alu 0 313 1 2062 149 0 0 chr10 70581735 70582037 -69734728 - AluSx SINE Alu -10 302 1 269 318 79 16 chr10 70582064 70582190 -69734575 + MIR SINE MIR 11 144 -118 773 185 11 69 chr10 70582916 70582981 -69733784 - MER5B DNA MER1_type 0 178 111 2447 80 7 0 chr10 70582981 70583283 -69733482 + AluSp SINE Alu 1 304 -9 773 185 11 69 chr10 70583283 70583406 -69733359 - MER5B DNA MER1_type -67 111 1 318 132 0 0 chr10 70583737 70583790 -69732975 + (CAT)n Simple_repeat Simple_repeat 1 53 0 2572 78 0 0 chr10 70583865 70584174 -69732591 - AluY SINE Alu -2 309 1 241 277 59 50 chr10 70584434 70584553 -69732212 + MIR3 SINE MIR 15 134 -74 205 309 83 12 chr10 70584845 70584929 -69731836 + MIR SINE MIR 28 117 -145 687 188 135 0 chr10 70584950 70585120 -69731645 - MIR SINE MIR -1 261 69 292 291 13 0 chr10 70585415 70585494 -69731271 + LTR67 LTR ERVL 97 176 -381 * 614 253 48 48 chr10 70585428 70585677 -69731088 + MLT1L LTR MaLR 168 416 -199 1963 110 25 73 chr10 70586200 70586527 -69730238 - AluSp SINE Alu -2 311 1 672 246 128 31 chr10 70586572 70586698 -69730067 - MLT1J LTR MaLR -173 338 226 351 0 0 0 chr10 70586698 70586737 -69730028 + (TG)n Simple_repeat Simple_repeat 2 40 0 672 246 128 31 chr10 70586737 70586899 -69729866 - MLT1J LTR MaLR -285 226 22 338 274 69 44 chr10 70586930 70587134 -69729631 - L2 LINE L2 -537 2777 2569 712 134 14 42 chr10 70587506 70587648 -69729117 + FLAM_C SINE Alu 6 143 0 188 207 69 58 chr10 70587671 70587758 -69729007 - L2 LINE L2 -228 3044 2957 268 294 113 31 chr10 70589627 70589787 -69726978 - L2 LINE L2 0 3313 3141 2314 95 3 3 chr10 70590093 70590388 -69726377 - AluSx SINE Alu -17 295 1 2346 185 12 22 chr10 70590388 70590719 -69726046 - L1M4 LINE L1 -981 5165 4839 2208 98 0 60 chr10 70590719 70591035 -69725730 - AluSx SINE Alu -15 297 1 2346 185 12 22 chr10 70591035 70591212 -69725553 - L1M4 LINE L1 -1307 4839 4662 222 346 0 13 chr10 70591312 70591390 -69725375 + L2 LINE L2 3236 3312 -1 360 224 0 0 chr10 70591519 70591617 -69725148 + G-rich Low_complexity Low_complexity 1 98 0 1072 110 0 21 chr10 70591644 70591789 -69724976 + AluY SINE Alu 106 247 -64 275 185 161 25 chr10 70591789 70591870 -69724895 - MLT1J LTR MaLR -400 111 20 608 73 0 92 chr10 70592676 70592785 -69723980 + THE1-int LTR MaLR 1173 1271 -309 * 677 43 96 43 chr10 70592782 70592897 -69723868 - THE1C-int LTR MaLR -172 1408 1288 6106 110 97 10 chr10 70592923 70593896 -69722869 - THE1C-int LTR MaLR -523 1057 1 2485 114 3 36 chr10 70593896 70594283 -69722482 - THE1C LTR MaLR 0 375 2 429 287 42 14 chr10 70594286 70594429 -69722336 + MIR SINE MIR 2 148 -114 450 0 0 0 chr10 70595224 70595272 -69721493 + (TG)n Simple_repeat Simple_repeat 1 98 0 450 0 0 0 chr10 70595272 70595322 -69721443 + (TG)n Simple_repeat Simple_repeat 2 51 0 225 254 28 14 chr10 70595858 70595929 -69720836 + MER113 DNA MER1_type? 365 436 -85 2380 96 0 10 chr10 70597094 70597407 -69719358 + AluSg SINE Alu 1 310 0 953 102 55 0 chr10 70598278 70598405 -69718360 + AluSx SINE Alu 1 134 -178 37 23 0 0 chr10 70598405 70598449 -69718316 + AT_rich Low_complexity Low_complexity 1 44 0 1300 131 0 0 chr10 70598453 70598629 -69718136 + AluSx SINE Alu 118 293 -19 216 270 52 87 chr10 70598740 70598855 -69717910 - L2 LINE L2 0 3272 3162 291 225 22 45 chr10 70598931 70599020 -69717745 - Charlie7 DNA MER1_type -2520 92 6 923 312 80 43 chr10 70599054 70599606 -69717159 - MLT1K LTR MaLR -12 576 5 4595 264 91 35 chr10 70599796 70600574 -69716191 + L1MEc LINE L1 35 768 -5628 1869 128 106 69 chr10 70600574 70601010 -69715755 + LTR47A LTR ERVL 1 452 0 4595 264 91 35 chr10 70601010 70602215 -69714550 + L1MEc LINE L1 768 2130 -4266 330 271 22 122 chr10 70602966 70603147 -69713618 + MIR3 SINE MIR 26 188 -20 541 285 127 35 chr10 70603190 70603450 -69713315 + MER102a DNA MER1_type 32 315 -15 439 260 65 26 chr10 70604068 70604222 -69712543 + MIR SINE MIR 25 184 -78 403 333 8 0 chr10 70604487 70604616 -69712149 - MIR SINE MIR -68 194 65 671 274 105 30 chr10 70605115 70605211 -69711554 + L1ME4a LINE L1 5576 5663 -458 2116 132 0 7 chr10 70605211 70605507 -69711258 + AluSx SINE Alu 1 294 -18 671 274 105 30 chr10 70605507 70605734 -69711031 + L1ME4a LINE L1 5663 5945 -176 315 49 0 0 chr10 70605734 70605775 -69710990 + (TC)n Simple_repeat Simple_repeat 2 42 0 671 274 105 30 chr10 70605775 70605909 -69710856 + L1ME4a LINE L1 5945 6068 -53 900 94 0 0 chr10 70606615 70606743 -69710022 + (TA)n Simple_repeat Simple_repeat 2 129 0 1111 245 155 19 chr10 70607567 70608011 -69708754 - MLT1C LTR MaLR 0 488 1 1548 103 15 5 chr10 70608506 70608710 -69708055 + AluSq SINE Alu 1 206 -107 415 35 0 0 chr10 70608711 70608768 -69707997 + AluSq SINE Alu 243 299 -12 353 277 0 0 chr10 70608977 70609078 -69707687 - L1MEd LINE L1 -6008 111 11 383 303 130 10 chr10 70609081 70609388 -69707377 - L1ME4a LINE L1 -230 5891 5548 351 339 86 50 chr10 70609638 70609831 -69706934 + L2 LINE L2 2438 2650 -664 1980 164 7 13 chr10 70609831 70610136 -69706629 - AluJb SINE Alu -9 303 1 351 339 86 50 chr10 70610136 70610281 -69706484 + L2 LINE L2 2650 2788 -526 343 311 68 0 chr10 70610322 70610454 -69706311 + MIR SINE MIR 48 188 -74 351 267 36 65 chr10 70610510 70610727 -69706038 - MLT1I LTR MaLR -118 332 123 607 113 28 0 chr10 70611009 70611115 -69705650 + GA-rich Low_complexity Low_complexity 3 111 0 189 0 0 0 chr10 70611115 70611136 -69705629 + (CAG)n Simple_repeat Simple_repeat 2 22 0 425 241 38 38 chr10 70611286 70611419 -69705346 + MIR3 SINE MIR 8 140 -68 1544 135 0 46 chr10 70612309 70612568 -69704197 + AluJo SINE Alu 29 275 -37 396 273 47 27 chr10 70612994 70613144 -69703621 + MIR3 SINE MIR 29 181 -27 189 225 0 0 chr10 70617850 70617890 -69698875 + MIR SINE MIR 73 112 -96 199 262 28 84 chr10 70618370 70618477 -69698288 - MIR3 SINE MIR -93 115 15 368 268 71 61 chr10 70619199 70619397 -69697368 + MIR SINE MIR 1 200 -62 1634 200 32 0 chr10 70619468 70619753 -69697012 + AluSx SINE Alu 1 294 -18 464 337 72 0 chr10 70619857 70620023 -69696742 - MIR SINE MIR -82 180 3 451 293 24 6 chr10 70620988 70621155 -69695610 + MIR3 SINE MIR 13 182 -26 418 138 202 0 chr10 70621884 70621978 -69694787 + MER81 DNA DNA 2 114 0 467 304 26 53 chr10 70622148 70622490 -69694275 + L1MC5 LINE L1 7603 7935 -26 482 266 127 9 chr10 70622525 70622754 -69694011 + MIR SINE MIR 7 262 0 640 269 91 33 chr10 70623567 70623809 -69692956 - MIR SINE MIR -2 260 5 611 229 42 52 chr10 70623844 70624036 -69692729 + L1MC5 LINE L1 7728 7917 -44 245 253 120 0 chr10 70624050 70624125 -69692640 + MIR SINE MIR 48 131 -131 378 0 0 0 chr10 70624377 70624419 -69692346 + (TG)n Simple_repeat Simple_repeat 1 42 0 462 65 0 0 chr10 70625031 70625093 -69691672 + (TG)n Simple_repeat Simple_repeat 2 63 0 252 139 0 0 chr10 70625146 70625182 -69691583 - U2 snRNA snRNA -152 36 1 297 226 16 0 chr10 70625210 70625272 -69691493 + MLT1E LTR MaLR 1 63 -479 1558 214 54 27 chr10 70625299 70625672 -69691093 + MLT1E LTR MaLR 211 593 0 370 237 39 96 chr10 70625871 70626027 -69690738 - MIR SINE MIR -70 192 46 912 160 0 21 chr10 70626427 70626571 -69690194 + AluJo SINE Alu 1 141 -171 482 292 227 31 chr10 70726652 70727036 -69589729 - L3 LINE CR1 -215 1362 904 22 70 0 0 chr10 70727286 70727329 -69589436 + AT_rich Low_complexity Low_complexity 1 43 0 2100 116 38 0 chr10 70728169 70728461 -69588304 + AluSg SINE Alu 1 303 -7 286 301 58 102 chr10 70729816 70730022 -69586743 - L2 LINE L2 -91 3181 2985 364 252 243 43 chr10 70730042 70730252 -69586513 + L2 LINE L2 3020 3271 -1 864 192 0 9 chr10 70730466 70730898 -69585867 + (CCA)n Simple_repeat Simple_repeat 1 428 0 217 316 82 20 chr10 70731143 70731241 -69585524 + MER91A DNA MER1_type 66 169 -27 277 239 43 35 chr10 70731790 70731892 -69584873 + MIR SINE MIR 33 132 -76 269 365 61 7 chr10 70732499 70732647 -69584118 - MIR SINE MIR -51 211 56 426 39 0 0 chr10 70732751 70732803 -69583962 + (TG)n Simple_repeat Simple_repeat 1 52 0 524 200 112 0 chr10 70733534 70733659 -69583106 - MLT1H1 LTR MaLR -5 550 412 444 214 120 0 chr10 70733742 70733859 -69582906 - MLT1H1 LTR MaLR -5 550 420 256 132 0 0 chr10 70733956 70733994 -69582771 - MLT1I LTR MaLR -274 135 98 225 140 20 20 chr10 70733968 70734018 -69582747 - MLT1H LTR MaLR -394 155 106 * 438 339 49 11 chr10 70734404 70734587 -69582178 + MIR SINE MIR 49 238 -24 226 209 0 0 chr10 70734952 70734995 -69581770 - L2 LINE L2 -214 3058 3016 260 130 14 58 chr10 70735324 70735393 -69581372 - MER53 DNA DNA -123 66 1 346 287 49 30 chr10 70737478 70737642 -69579123 + L2 LINE L2 2851 3017 -255 441 212 24 0 chr10 70737731 70737816 -69578949 + L2 LINE L2 3186 3272 0 332 257 204 0 chr10 70737986 70738099 -69578666 - L2 LINE L2 0 3272 3137 446 190 161 44 chr10 70738126 70738263 -69578502 - MLT1J LTR MaLR -23 488 336 2072 129 30 7 chr10 70738457 70738760 -69578005 + AluSg SINE Alu 1 310 0 742 310 134 7 chr10 70739337 70739756 -69577009 - MLT1K LTR MaLR -110 478 7 237 250 129 57 chr10 70740169 70740293 -69576472 - MER5B DNA MER1_type -29 149 17 1102 226 4 36 chr10 70740866 70741118 -69575647 + MIR SINE MIR 3 246 -16 374 160 53 0 chr10 70741245 70741320 -69575445 - MIR SINE MIR -71 191 113 475 210 41 142 chr10 70741856 70742075 -69574690 + MER117 DNA MER1_type 1 197 0 491 299 23 17 chr10 70742454 70742628 -69574137 + MER117 DNA MER1_type 11 185 -12 356 291 119 104 chr10 70743467 70743821 -69572944 + L2 LINE L2 2914 3272 0 599 304 42 29 chr10 70743862 70744102 -69572663 + L3 LINE CR1 1333 1575 -2 376 251 118 80 chr10 70744605 70744757 -69572008 - Charlie8 DNA MER1_type -59 282 120 2361 107 0 0 chr10 70744757 70745067 -69571698 - AluSx SINE Alu -2 310 1 376 251 118 80 chr10 70745067 70745101 -69571664 - Charlie8 DNA MER1_type -221 120 89 498 281 135 10 chr10 70745325 70745638 -69571127 + LTR16A LTR ERVL 21 362 -88 2433 192 89 15 chr10 70746267 70746808 -69569957 - MER119 DNA MER1_type -2 581 1 1107 97 0 7 chr10 70747039 70747183 -69569582 + AluSq/x SINE Alu 1 143 -170 930 195 34 27 chr10 70747358 70747620 -69569145 - L1M4 LINE L1 -1298 4848 4585 605 79 10 40 chr10 70747620 70747721 -69569044 + MER4A LTR ERV1 1 98 -566 1861 115 9 22 chr10 70747722 70748071 -69568694 + MER4A LTR ERV1 262 664 0 1313 256 129 2 chr10 70748072 70748521 -69568244 - L1M4 LINE L1 -1559 4587 4082 775 314 76 51 chr10 70748607 70749081 -69567684 - L1MEc LINE L1 -5861 535 50 1722 128 14 78 chr10 70749138 70749506 -69567259 - MER4A LTR ERV1 0 664 262 496 133 89 0 chr10 70749507 70749597 -69567168 - MER4A LTR ERV1 -566 98 1 343 259 237 7 chr10 70749608 70749747 -69567018 - L1MEd LINE L1 -5270 849 679 2486 193 115 75 chr10 70749943 70750732 -69566033 + LTR1B LTR ERV1 1 821 -5 781 241 42 0 chr10 70751457 70751648 -69565117 + MIR SINE MIR 60 258 -4 499 235 8 15 chr10 70752250 70752382 -69564383 + MIR3 SINE MIR 30 160 -48 234 254 103 52 chr10 70752389 70752551 -69564214 - MER5A DNA MER1_type -10 179 1 685 239 144 6 chr10 70753857 70754037 -69562728 - MIR SINE MIR 0 262 58 194 308 0 0 chr10 70754093 70754158 -69562607 - MIR SINE MIR -12 250 186 1444 192 70 3 chr10 70754284 70754596 -69562169 - MER58B DNA MER1_type -8 333 1 2197 105 3 51 chr10 70754868 70755183 -69561582 + AluSx SINE Alu 1 300 -12 1287 277 78 41 chr10 70755186 70755727 -69561038 - MLT1K LTR MaLR -24 564 4 198 265 88 0 chr10 70755735 70755803 -69560962 + MIR SINE MIR 111 184 -78 880 182 52 0 chr10 70755935 70756089 -69560676 + FRAM SINE Alu 1 161 -15 3559 149 1 11 chr10 70756096 70756742 -69560023 + L1MB3 LINE L1 5544 6183 0 1908 162 7 3 chr10 70758242 70758539 -69558226 - AluJb SINE Alu -14 298 1 562 240 7 20 chr10 70758565 70758711 -69558054 - L1MA10 LINE L1 -7 6327 6184 * 1332 231 25 16 chr10 70758710 70759030 -69557735 - L1ME1 LINE L1 -199 5967 5645 1845 178 48 95 chr10 70759033 70759302 -69557463 - L1ME1 LINE L1 -577 5589 5309 2234 125 3 6 chr10 70759302 70759614 -69557151 + AluSx SINE Alu 1 311 -1 1845 178 48 95 chr10 70759614 70760142 -69556623 - L1ME1 LINE L1 -857 5309 4812 1634 157 39 51 chr10 70760311 70760744 -69556021 - L1ME1 LINE L1 -1340 4806 4379 1008 114 0 0 chr10 70760745 70760921 -69555844 - AluSq SINE Alu 0 328 153 920 173 12 0 chr10 70760923 70761091 -69555674 - L1ME1 LINE L1 -1903 4243 4074 604 233 58 58 chr10 70761977 70762166 -69554599 + MIR SINE MIR 74 262 0 227 288 34 85 chr10 70762162 70762280 -69554485 - L2 LINE L2 -18 3254 3143 * 246 284 125 0 chr10 70762429 70762517 -69554248 + MIR SINE MIR 51 149 -59 1762 181 29 5 chr10 70762520 70762887 -69553878 + L1MB3 LINE L1 5785 6163 -20 2453 100 0 0 chr10 70762887 70763196 -69553569 - AluSg SINE Alu -1 309 1 289 219 114 19 chr10 70763339 70763444 -69553321 + MER91C DNA MER1_type 1 115 -25 725 284 94 16 chr10 70763660 70763980 -69552785 - L2 LINE L2 -2 3311 2967 2020 166 40 44 chr10 70764462 70764951 -69551814 + L1PBa LINE L1 2014 2502 -4361 2407 82 3 0 chr10 70764951 70765244 -69551521 + AluSg SINE Alu 1 294 -16 2020 166 40 44 chr10 70765244 70765273 -69551492 + L1PBa LINE L1 2502 2530 -4333 635 209 78 7 chr10 70765759 70765912 -69550853 - Charlie1 DNA MER1_type -255 2506 2343 231 179 214 18 chr10 70765910 70765966 -69550799 - Charlie1 DNA MER1_type -2690 71 5 * 234 366 9 9 chr10 70766012 70766124 -69550641 - MIR SINE MIR -61 147 36 491 288 60 78 chr10 70766178 70766557 -69550208 - L1MEc LINE L1 -899 1591 1207 4605 47 0 0 chr10 70766557 70767136 -69549629 + L1PA6 LINE L1 5576 6154 0 491 288 60 78 chr10 70767136 70767341 -69549424 - L1MEc LINE L1 -1283 1207 1063 2420 115 0 0 chr10 70767341 70767653 -69549112 - AluSx SINE Alu 0 312 1 491 288 60 78 chr10 70767653 70767741 -69549024 - L1MEc LINE L1 -1427 1063 975 1280 218 51 25 chr10 70767989 70768343 -69548422 - MLT1A2 LTR MaLR -11 363 1 2318 105 0 3 chr10 70768485 70768790 -69547975 + AluSg SINE Alu 1 304 -6 3128 184 169 124 chr10 70769138 70769722 -69547043 - L1MD3 LINE L1 -9 7986 7429 473 209 26 0 chr10 70769722 70769837 -69546928 - MLT1F1 LTR MaLR -449 118 1 3128 184 169 124 chr10 70769837 70770022 -69546743 - L1MD3 LINE L1 -566 7429 7254 1920 178 0 0 chr10 70770022 70770331 -69546434 + AluSx SINE Alu 1 309 -3 3128 184 169 124 chr10 70770331 70770737 -69546028 - L1MD3 LINE L1 -741 7254 6629 2167 129 94 10 chr10 70770737 70771132 -69545633 + MSTC LTR MaLR 1 428 0 3128 184 169 124 chr10 70771132 70771217 -69545548 - L1MD3 LINE L1 -1366 6629 6549 977 211 29 20 chr10 70771283 70771529 -69545236 - L1ME2 LINE L1 -44 6120 5873 1330 190 45 103 chr10 70771530 70771950 -69544815 - MLT1C LTR MaLR 0 467 1 2060 225 8 42 chr10 70771952 70772477 -69544288 - L1ME2 LINE L1 -304 5860 5354 264 122 41 0 chr10 70772478 70772527 -69544238 + LTR10B LTR ERV1 1 51 -496 2425 121 163 8 chr10 70772550 70773022 -69543743 + LTR10A LTR ERV1 1 545 -64 472 224 61 0 chr10 70773045 70773192 -69543573 - L1ME2 LINE L1 -797 5349 5194 595 143 19 0 chr10 70773192 70773297 -69543468 - AluJb SINE Alu 0 312 206 299 278 63 8 chr10 70773582 70773708 -69543057 - L1MEd LINE L1 -5985 134 2 555 238 157 0 chr10 70774658 70774805 -69541960 - MER5A DNA MER1_type 0 189 20 392 212 59 123 chr10 70774850 70775020 -69541745 + MER5B DNA MER1_type 19 177 -1 244 309 229 20 chr10 70776069 70776270 -69540495 + MIR SINE MIR 1 243 -19 861 114 6 12 chr10 70776415 70776581 -69540184 + (TCCA)n Simple_repeat Simple_repeat 4 168 0 413 299 39 26 chr10 70776625 70776779 -69539986 - MER5A DNA MER1_type -33 156 1 219 93 139 0 chr10 70776792 70776835 -69539930 - MIR SINE MIR -62 146 98 189 353 0 0 chr10 70777383 70777451 -69539314 + MIR SINE MIR 33 100 -108 2166 97 30 20 chr10 70777545 70777845 -69538920 - AluSg SINE Alu -7 303 1 21 36 0 0 chr10 70777850 70777878 -69538887 + AT_rich Low_complexity Low_complexity 1 28 0 319 236 36 55 chr10 70777887 70777930 -69538835 + MER103 DNA DNA 1 43 -123 1133 227 101 30 chr10 70777930 70778366 -69538399 + MLT1C LTR MaLR 1 467 0 319 236 36 55 chr10 70778366 70778432 -69538333 + MER103 DNA DNA 43 108 -58 2368 68 4 0 chr10 70778464 70778775 -69537990 + AluY SINE Alu 1 312 0 750 243 154 0 chr10 70779267 70779481 -69537284 - MIR SINE MIR -13 249 3 194 350 12 0 chr10 70779520 70779600 -69537165 - L2 LINE L2 0 3313 3233 332 338 44 6 chr10 70780051 70780211 -69536554 - MIR SINE MIR -1 261 96 183 296 19 0 chr10 70780385 70780439 -69536326 + MIR SINE MIR 205 259 -3 180 299 147 6 chr10 70780716 70780873 -69535892 + L2 LINE L2 2885 3063 -209 417 222 209 7 chr10 70781008 70781161 -69535604 - MER5A DNA MER1_type 0 189 6 205 296 91 11 chr10 70781204 70781292 -69535473 - MER5B DNA MER1_type -35 143 49 1962 162 3 7 chr10 70782261 70782569 -69534196 + AluSx SINE Alu 1 307 -5 782 274 34 5 chr10 70782604 70782812 -69533953 - MIR SINE MIR -13 249 36 2582 136 19 7 chr10 70783134 70783554 -69533211 - MSTB LTR MaLR -1 425 1 385 275 0 124 chr10 70783974 70784093 -69532672 + MIR SINE MIR 20 108 -154 2671 36 10 3 chr10 70784093 70784401 -69532364 - AluY SINE Alu 0 311 2 385 275 0 124 chr10 70784401 70784474 -69532291 + MIR SINE MIR 108 188 -74 2083 129 94 32 chr10 70785707 70786110 -69530655 - MSTC LTR MaLR 0 428 1 190 240 147 0 chr10 70786497 70786572 -69530193 + MIR3 SINE MIR 109 194 -14 1719 172 7 21 chr10 70788737 70789047 -69527718 + AluJo SINE Alu 1 306 0 394 335 17 40 chr10 70789463 70789636 -69527129 + MIR SINE MIR 5 173 -89 220 261 80 45 chr10 70789681 70789769 -69526996 - MIR SINE MIR -2 260 170 745 318 35 16 chr10 70790767 70791022 -69525743 + MIR SINE MIR 3 262 0 304 283 94 22 chr10 70793050 70793188 -69523577 + MIR SINE MIR 103 250 -12 207 353 74 0 chr10 70794269 70794391 -69522374 + MIR SINE MIR 128 258 -4 236 258 89 81 chr10 70794976 70795100 -69521665 + MIR3 SINE MIR 64 188 -20 * 859 240 68 9 chr10 70795097 70795318 -69521447 + MIR SINE MIR 29 262 0 417 201 79 29 chr10 70795678 70795817 -69520948 + L2 LINE L2 3168 3313 0 21 57 0 0 chr10 70796436 70796471 -69520294 + AT_rich Low_complexity Low_complexity 1 35 0 1449 148 0 34 chr10 70796510 70796746 -69520019 + AluJo SINE Alu 30 257 -55 186 304 29 0 chr10 70796937 70797006 -69519759 - MIR SINE MIR -59 203 133 753 209 12 23 chr10 70797136 70797308 -69519457 - MIR SINE MIR -91 171 2 252 330 22 11 chr10 70797419 70797510 -69519255 - L3b LINE CR1 -132 1451 1360 227 363 0 0 chr10 70797510 70797590 -69519175 + MER117 DNA MER1_type 1 80 -117 180 0 0 0 chr10 70799139 70799159 -69517606 + (T)n Simple_repeat Simple_repeat 1 20 0 468 245 252 0 chr10 70801251 70801390 -69515375 - MIR SINE MIR -25 237 64 281 349 30 8 chr10 70802059 70802191 -69514574 - MIR SINE MIR -55 153 19 290 289 72 0 chr10 70802633 70802730 -69514035 - L2 LINE L2 -1 3271 3168 227 355 65 0 chr10 70802749 70802842 -69513923 - L2 LINE L2 -20 3252 3154 526 286 42 36 chr10 70802957 70803125 -69513640 - MIR SINE MIR -6 256 88 216 0 0 0 chr10 70803174 70803198 -69513567 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 1752 157 31 3 chr10 70803198 70803484 -69513281 - AluJb SINE Alu -18 294 1 907 212 69 0 chr10 70803966 70804169 -69512596 + MER20 DNA MER1_type 1 217 -2 481 352 56 9 chr10 70804365 70804581 -69512184 - MIR SINE MIR -12 250 25 293 241 40 13 chr10 70804955 70805050 -69511715 - MIR SINE MIR -39 169 71 915 226 26 0 chr10 70805147 70805337 -69511428 - MER63A DNA MER1_type -13 197 3 489 216 134 8 chr10 70805473 70805607 -69511158 - MER117 DNA MER1_type -43 154 4 242 273 50 72 chr10 70807334 70807473 -69509292 - MIR SINE MIR -46 216 81 613 75 0 0 chr10 70807981 70808061 -69508704 - MADE1 DNA Mariner 0 80 1 429 266 36 58 chr10 70808109 70808248 -69508517 - MIR SINE MIR -48 214 79 421 265 80 33 chr10 70808312 70808463 -69508302 - MIR SINE MIR -103 159 2 1085 208 38 4 chr10 70808781 70809017 -69507748 + MIR SINE MIR 15 258 -4 2406 80 0 0 chr10 70809141 70809443 -69507322 - AluSg SINE Alu -8 302 1 261 286 218 15 chr10 70809445 70809578 -69507187 - MIR SINE MIR -36 226 67 1273 163 102 1 chr10 70809591 70809856 -69506909 - MER1B DNA MER1_type 0 339 89 1091 254 6 75 chr10 70810844 70811203 -69505562 - MER102b DNA MER1_type -1 340 7 195 289 40 26 chr10 70811234 70811310 -69505455 + L2 LINE L2 3237 3313 0 370 328 90 19 chr10 70812090 70812315 -69504450 - MIR SINE MIR -21 241 3 184 357 0 0 chr10 70812366 70812422 -69504343 - MIR SINE MIR -110 98 43 269 270 20 9 chr10 70812451 70812606 -69504159 - MER117 DNA MER1_type -2 195 1 1615 155 31 24 chr10 70812704 70812995 -69503770 - AluJb SINE Alu -19 293 1 412 348 139 35 chr10 70813269 70813752 -69503013 - L1ME4a LINE L1 -1 6120 5588 191 350 25 25 chr10 70813848 70813968 -69502797 - MIR SINE MIR -69 139 20 205 291 0 70 chr10 70814694 70814780 -69501985 - L2 LINE L2 -7 3265 3186 * 627 277 49 5 chr10 70814778 70814962 -69501803 + MIR SINE MIR 71 262 0 393 262 89 98 chr10 70814987 70815264 -69501501 - L2 LINE L2 -129 3184 2884 902 197 83 0 chr10 70815264 70815324 -69501441 - MER3 DNA MER1_type 0 209 155 2007 139 0 16 chr10 70815324 70815668 -69501097 + AluSx SINE Alu 1 312 0 902 197 83 0 chr10 70815668 70815800 -69500965 - MER3 DNA MER1_type -54 155 1 393 262 89 98 chr10 70815800 70815945 -69500820 - L2 LINE L2 -429 2884 2739 568 226 37 53 chr10 70816270 70816546 -69500219 + LTR16A LTR ERVL 18 354 -96 255 321 107 14 chr10 70816880 70817020 -69499745 - MIR SINE MIR -109 153 1 23 0 0 0 chr10 70817761 70817784 -69498981 + AT_rich Low_complexity Low_complexity 1 23 0 444 279 144 42 chr10 70818754 70818969 -69497796 + MIR SINE MIR 26 262 0 212 219 14 55 chr10 70819731 70819804 -69496961 + GA-rich Low_complexity Low_complexity 2 71 0 180 271 34 0 chr10 70819814 70819873 -69496892 - MIR SINE MIR -19 243 183 334 299 85 30 chr10 70819943 70820107 -69496658 + MIR SINE MIR 1 173 -89 200 307 0 13 chr10 70820176 70820251 -69496514 + GA-rich Low_complexity Low_complexity 6 79 0 210 302 69 26 chr10 70821256 70821372 -69495393 - L2 LINE L2 -45 3227 3107 333 317 103 0 chr10 70821385 70821530 -69495235 - MER5A DNA MER1_type 0 189 30 2355 94 0 0 chr10 70821791 70822098 -69494667 + AluSx SINE Alu 6 312 0 565 245 28 0 chr10 70822647 70822790 -69493975 - MIR SINE MIR -5 257 111 197 237 0 0 chr10 70822899 70822937 -69493828 - MIR SINE MIR -141 121 84 193 298 0 0 chr10 70822962 70823009 -69493756 - L2 LINE L2 -8 3264 3218 388 291 73 12 chr10 70823030 70823195 -69493570 + L2 LINE L2 2874 3048 -224 181 308 19 0 chr10 70823349 70823401 -69493364 + L2 LINE L2 3220 3272 0 673 279 15 72 chr10 70823534 70823666 -69493099 - MIR SINE MIR -4 258 147 978 194 56 10 chr10 70823666 70823862 -69492903 + MER3 DNA MER1_type 5 209 0 673 279 15 72 chr10 70823862 70823991 -69492774 - MIR SINE MIR -115 147 12 245 263 105 0 chr10 70824130 70824225 -69492540 + MIR3 SINE MIR 103 207 -1 594 274 131 48 chr10 70824856 70824873 -69491892 + L2 LINE L2 2673 2687 -585 1979 153 50 36 chr10 70824873 70825232 -69491533 - THE1B LTR MaLR 0 364 1 594 274 131 48 chr10 70825232 70825769 -69490996 + L2 LINE L2 2687 3272 0 206 276 53 61 chr10 70826013 70826241 -69490524 - L2 LINE L2 -212 3060 2835 940 301 86 25 chr10 70827039 70827550 -69489215 + L2 LINE L2 2436 2977 -337 317 313 76 58 chr10 70827686 70827749 -69489016 + L2 LINE L2 3021 3081 -232 364 136 0 0 chr10 70827749 70827808 -69488957 + L1MA9 LINE L1 6245 6303 -9 317 313 76 58 chr10 70827808 70828019 -69488746 + L2 LINE L2 3081 3300 -13 222 118 0 0 chr10 70828019 70828053 -69488712 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 205 356 62 14 chr10 70828233 70828379 -69488386 - MIR SINE MIR 0 262 110 191 237 53 40 chr10 70828622 70828698 -69488067 + MIR3 SINE MIR 3 79 -129 * 525 289 54 6 chr10 70828690 70828856 -69487909 - MIR SINE MIR -12 250 77 183 370 46 0 chr10 70828914 70829022 -69487743 + MIR3 SINE MIR 77 189 -19 890 235 54 14 chr10 70831168 70831389 -69485376 + MIR SINE MIR 33 262 0 283 333 80 0 chr10 70831526 70831664 -69485101 + MIR SINE MIR 45 191 -58 581 264 88 22 chr10 70832506 70832733 -69484032 + MIR SINE MIR 21 262 0 1098 170 59 17 chr10 70832884 70833160 -69483605 + MER1B DNA MER1_type 1 339 0 305 79 0 0 chr10 70834686 70834724 -69482041 - tRNA-Trp tRNA tRNA -37 38 1 259 354 102 0 chr10 70834764 70834891 -69481874 - MIR SINE MIR -77 185 46 232 307 198 0 chr10 70835283 70835384 -69481381 - MIR SINE MIR -85 177 57 1162 138 22 31 chr10 70836174 70836496 -69480269 + L1MB8 LINE L1 5789 6178 0 393 263 86 86 chr10 70836686 70837058 -69479707 - L1ME3A LINE L1 -230 5940 5569 212 317 0 17 chr10 70837066 70837126 -69479639 - MIR SINE MIR -62 146 88 227 324 0 0 chr10 70837733 70837801 -69478964 + MER5A DNA MER1_type 4 71 -118 303 309 109 6 chr10 70837815 70837980 -69478785 - L2 LINE L2 -491 2823 2642 185 343 19 37 chr10 70839614 70839722 -69477043 + L2 LINE L2 2656 2761 -553 517 249 60 49 chr10 70839728 70839913 -69476852 - MER117 DNA MER1_type -3 194 8 832 269 98 24 chr10 70840118 70840465 -69476300 + MLT1J LTR MaLR 13 332 -114 236 325 12 12 chr10 70841748 70841828 -69474937 - L2 LINE L2 -4 3268 3189 297 232 85 0 chr10 70842024 70842106 -69474659 + MIR SINE MIR 156 244 -18 537 328 84 8 chr10 70842963 70843201 -69473564 - MIR SINE MIR -3 259 4 273 283 222 0 chr10 70844362 70844461 -69472304 - L2 LINE L2 0 3272 3152 354 309 73 0 chr10 70845656 70845766 -69470999 + MIR SINE MIR 143 260 -2 * 376 262 19 19 chr10 70845760 70845867 -69470898 - MIR SINE MIR -107 155 49 535 290 14 55 chr10 70845893 70846110 -69470655 + Charlie8 DNA MER1_type 11 218 -2199 297 327 19 10 chr10 70846305 70846409 -69470356 - MIR SINE MIR -88 120 16 730 259 43 93 chr10 70846975 70847350 -69469415 - L2 LINE L2 -100 3213 2858 1063 290 98 13 chr10 70847478 70847892 -69468873 + LTR16A LTR ERVL 6 442 -8 257 341 78 22 chr10 70847914 70848115 -69468650 - MIR SINE MIR -56 206 3 2794 165 54 26 chr10 70848264 70848768 -69467997 + MLT2B1 LTR ERVL 1 518 -2 274 325 138 8 chr10 70848772 70848895 -69467870 - L2 LINE L2 -510 2804 2666 2595 224 160 126 chr10 70849315 70850041 -69466724 + L2 LINE L2 826 1526 -1788 657 220 75 17 chr10 70850041 70850214 -69466551 - MER58A DNA MER1_type -38 186 4 2595 224 160 126 chr10 70850214 70851124 -69465641 + L2 LINE L2 1526 2696 -618 727 252 238 23 chr10 70851120 70851465 -69465300 + L2 LINE L2 2876 3294 -19 * 508 256 137 22 chr10 70851465 70851692 -69465073 + MER102a DNA MER1_type 78 330 0 208 254 68 0 chr10 70852277 70852336 -69464429 - MIR SINE MIR -17 245 183 434 270 55 55 chr10 70852495 70852658 -69464107 + MIR3 SINE MIR 30 165 -43 273 344 103 15 chr10 70854073 70854268 -69462497 - L2 LINE L2 -1 3312 3101 552 62 25 38 chr10 70854443 70854523 -69462242 + MADE1 DNA Mariner 2 80 0 437 258 45 15 chr10 70854550 70854682 -69462083 - MIR SINE MIR -118 144 9 967 171 32 42 chr10 70854736 70854952 -69461813 - MIR SINE MIR -33 229 16 535 308 63 16 chr10 70854962 70855215 -69461550 - L2 LINE L2 -426 2888 2624 299 259 148 0 chr10 70855459 70855567 -69461198 + L3 LINE CR1 1384 1507 -70 336 24 0 0 chr10 70856830 70856871 -69459894 + (TC)n Simple_repeat Simple_repeat 1 41 0 326 235 105 52 chr10 70856872 70857025 -69459740 + MER5A DNA MER1_type 7 167 -22 1102 226 4 36 chr10 70857598 70857850 -69458915 + MIR SINE MIR 3 246 -16 374 160 53 0 chr10 70857977 70858052 -69458713 - MIR SINE MIR -71 191 113 213 297 30 40 chr10 70863998 70864099 -69452666 - MIR3 SINE MIR -99 109 10 1729 195 0 3 chr10 70864405 70864703 -69452062 - AluJb SINE Alu -15 297 1 393 269 137 14 chr10 70864869 70865081 -69451684 + Charlie8 DNA MER1_type 1 238 -2179 489 236 9 9 chr10 70865852 70865962 -69450803 + MIR SINE MIR 43 152 -110 712 319 75 46 chr10 70866278 70866733 -69450032 + L2 LINE L2 2841 3308 -5 663 296 50 0 chr10 70866928 70867127 -69449638 + MIR SINE MIR 48 256 -6 407 105 0 13 chr10 70867362 70867438 -69449327 + (TC)n Simple_repeat Simple_repeat 2 76 0 423 0 0 0 chr10 70867438 70867485 -69449280 + (CA)n Simple_repeat Simple_repeat 1 47 0 2338 98 3 0 chr10 70868223 70868519 -69448246 - AluSx SINE Alu -15 297 1 318 248 39 54 chr10 70868541 70868670 -69448095 - MIR SINE MIR -64 144 18 636 291 91 4 chr10 70868742 70868972 -69447793 - MIR SINE MIR -12 250 1 894 227 120 0 chr10 70869040 70869256 -69447509 - MIR SINE MIR -19 243 2 294 250 0 36 chr10 70870152 70870236 -69446529 + CT-rich Low_complexity Low_complexity 1 81 0 326 265 182 0 chr10 70870949 70871081 -69445684 - MIR3 SINE MIR -5 203 48 934 244 23 54 chr10 70871452 70871707 -69445058 - MIR SINE MIR -1 261 10 317 318 142 8 chr10 70872271 70872417 -69444348 - MIR SINE MIR -53 155 5 432 307 146 59 chr10 70873183 70873892 -69442873 - L2 LINE L2 -4 3268 2301 734 220 14 57 chr10 70873916 70874125 -69442640 - MER63A DNA MER1_type -2 208 9 621 316 127 63 chr10 70874525 70875110 -69441655 + L1ME LINE L1 4724 5345 -801 566 289 67 10 chr10 70875971 70876165 -69440600 - MIR SINE MIR -34 228 24 364 254 121 62 chr10 70877841 70877989 -69438776 - MIR SINE MIR -56 152 6 367 87 17 44 chr10 70880009 70880084 -69436681 + MER51B LTR ERV1 233 286 -91 204 97 0 0 chr10 70880084 70880115 -69436650 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4803 74 38 7 chr10 70880424 70881117 -69435648 - SVA Other Other -616 770 57 462 18 0 0 chr10 70881117 70881172 -69435593 + (GGGAGA)n Simple_repeat Simple_repeat 5 59 0 408 308 60 14 chr10 70881181 70881377 -69435388 + L1ME LINE L1 5242 5448 -752 827 160 0 8 chr10 70881409 70881534 -69435231 + FLAM_A SINE Alu 1 124 -9 505 145 9 8 chr10 70881707 70881799 -69434966 - MLT1J LTR MaLR -275 174 42 308 304 73 21 chr10 70881833 70882202 -69434563 + L1ME LINE L1 5403 5799 -363 23 0 0 0 chr10 70882431 70882454 -69434311 + AT_rich Low_complexity Low_complexity 1 23 0 1775 172 30 3 chr10 70883227 70883523 -69433242 - AluJb SINE Alu -8 304 1 185 374 44 34 chr10 70883964 70884170 -69432595 - L3 LINE CR1 -970 607 400 273 103 0 0 chr10 70884439 70884478 -69432287 + MER66A LTR ERV1 440 478 0 308 322 35 20 chr10 70885161 70885360 -69431405 + L1ME LINE L1 5497 5698 -423 2223 113 10 0 chr10 70885360 70885660 -69431105 + AluSq SINE Alu 1 303 -10 2135 108 6 44 chr10 70885681 70885814 -69430951 + AluSx SINE Alu 2 139 -173 2639 58 0 0 chr10 70885814 70886123 -69430642 + AluY SINE Alu 1 309 -2 2135 108 6 44 chr10 70886123 70886305 -69430460 + AluSx SINE Alu 139 305 -7 894 228 12 0 chr10 70886419 70886586 -69430179 + AluJb SINE Alu 136 304 -8 23 33 0 0 chr10 70886593 70886623 -69430142 + AT_rich Low_complexity Low_complexity 1 30 0 882 202 24 85 chr10 70887012 70887044 -69429721 - MLT2B1 LTR ERVL 0 520 488 1728 190 10 22 chr10 70887044 70887355 -69429410 + AluJb SINE Alu 1 307 -5 882 202 24 85 chr10 70887355 70887569 -69429196 - MLT2B1 LTR ERVL -32 488 289 605 150 0 0 chr10 70887560 70887660 -69429105 - MLT2B1 LTR ERVL -420 100 1 * 2032 151 0 16 chr10 70887688 70888035 -69428730 - AluSx SINE Alu 0 312 1 6914 217 24 32 chr10 70888304 70889302 -69427463 + L1M4b LINE L1 7 1012 -5843 1967 157 3 3 chr10 70889302 70889602 -69427163 - AluSx SINE Alu -12 300 1 6914 217 24 32 chr10 70889602 70889791 -69426974 + L1M4b LINE L1 1012 1201 -5654 2491 66 3 7 chr10 70889791 70890093 -69426672 + AluY SINE Alu 1 301 -10 6914 217 24 32 chr10 70890093 70890742 -69426023 + L1M4b LINE L1 1201 1820 -5035 6233 62 19 19 chr10 70890892 70891715 -69425050 + SVA Other Other 561 1383 -3 1442 210 31 3 chr10 70891820 70892172 -69424593 - LTR37A LTR ERV1 -52 374 13 229 279 82 29 chr10 70892672 70892880 -69423885 - L1M4 LINE L1 -1139 5007 4789 652 258 21 42 chr10 70892925 70893212 -69423553 - L1MC5 LINE L1 -48 7913 7633 411 285 79 75 chr10 70893418 70893723 -69423042 - L1M4 LINE L1 -1542 4604 4299 3186 252 59 28 chr10 70893936 70893995 -69422770 - L1ME LINE L1 -4537 1543 1487 1864 169 6 16 chr10 70893995 70894309 -69422456 - AluJo SINE Alu -1 311 1 3186 252 59 28 chr10 70894309 70895749 -69421016 - L1ME LINE L1 -4593 1487 3 411 28 0 103 chr10 70895781 70895888 -69420877 + (TTCC)n Simple_repeat Simple_repeat 3 98 0 418 290 133 47 chr10 70895931 70896833 -69419932 - L1M4 LINE L1 -1784 4362 3279 2155 101 17 7 chr10 70896833 70897121 -69419644 + AluSq SINE Alu 1 291 -22 418 290 133 47 chr10 70897121 70897702 -69419063 - L1M4 LINE L1 -2867 3279 2750 1451 175 93 15 chr10 70897855 70898124 -69418641 + AluJb SINE Alu 7 296 -16 2618 144 28 57 chr10 70898124 70898247 -69418518 - L1MB7 LINE L1 -333 6349 6224 2029 128 3 13 chr10 70898247 70898545 -69418220 - AluSx SINE Alu -17 295 1 2618 144 28 57 chr10 70898545 70898682 -69418083 - L1MB7 LINE L1 -458 6224 6085 1789 162 0 11 chr10 70898682 70898953 -69417812 - AluJb SINE Alu -10 302 35 2618 144 28 57 chr10 70898953 70899289 -69417476 - L1MB7 LINE L1 -597 6085 5769 1224 193 26 29 chr10 70899284 70899579 -69417186 - L1MB7 LINE L1 -1438 5206 4912 * 2419 86 7 0 chr10 70899579 70899880 -69416885 - AluSx SINE Alu -9 303 1 287 176 0 0 chr10 70899845 70899896 -69416869 - AluSp SINE Alu -133 170 120 * 1224 193 26 29 chr10 70899880 70899926 -69416839 - L1MB7 LINE L1 -1732 4912 4866 922 261 16 4 chr10 70899911 70900156 -69416609 - L1MB7 LINE L1 -2296 4348 4101 * 346 146 29 29 chr10 70900167 70900270 -69416495 + CT-rich Low_complexity Low_complexity 4 106 0 671 228 0 0 chr10 70900282 70900405 -69416360 - FLAM_C SINE Alu -11 132 10 1478 213 105 29 chr10 70900407 70901079 -69415686 - L1MB7 LINE L1 -3992 2652 1903 1860 141 54 3 chr10 70901079 70901376 -69415389 - AluSx SINE Alu 0 312 1 1478 213 105 29 chr10 70901376 70901510 -69415255 - L1MB7 LINE L1 -4741 1903 1781 848 182 11 28 chr10 70901518 70901694 -69415071 - LTR9 LTR ERV1 -83 529 357 3045 147 17 19 chr10 70901694 70902218 -69414547 - HUERS-P3 LTR ERV1 -8392 527 5 915 156 12 17 chr10 70902223 70902396 -69414369 - LTR9 LTR ERV1 0 612 441 3551 222 38 24 chr10 70902407 70903384 -69413381 - L1M2c LINE L1 -4529 2260 1270 1770 279 65 27 chr10 70903734 70904361 -69412404 - L1M2c LINE L1 -6132 657 7 999 240 128 0 chr10 70904365 70904661 -69412104 - L1M4 LINE L1 -3701 2445 2112 1549 140 22 0 chr10 70904677 70904905 -69411860 - AluSg/x SINE Alu 0 310 78 6009 218 22 40 chr10 70904905 70905157 -69411608 - L1MB7 LINE L1 -4954 1588 1333 2136 134 10 0 chr10 70905157 70905455 -69411310 - AluSx SINE Alu -11 301 1 6009 218 22 40 chr10 70905455 70906818 -69409947 - L1MB7 LINE L1 -5209 1333 1 377 230 153 24 chr10 70907062 70907271 -69409494 - HAL1 LINE L1 -743 1764 1529 758 203 65 135 chr10 70907282 70907839 -69408926 - L1MC4 LINE L1 -6 8036 7519 218 258 101 22 chr10 70908288 70908377 -69408388 - MIR3 SINE MIR -48 160 65 1059 191 173 24 chr10 70909186 70909557 -69407208 + LTR37A LTR ERV1 1 426 0 351 260 125 0 chr10 70910279 70910375 -69406390 + MIR3 SINE MIR 83 190 -18 268 310 103 0 chr10 70910977 70911131 -69405634 - MIR SINE MIR -46 216 37 305 252 236 24 chr10 70911835 70911962 -69404803 - MIR3 SINE MIR -52 156 3 414 0 0 0 chr10 70915991 70916037 -69400728 + (TA)n Simple_repeat Simple_repeat 2 47 0 2313 104 0 7 chr10 70916037 70916344 -69400421 - AluSx SINE Alu -7 305 1 212 308 45 47 chr10 70917002 70917192 -69399573 - MIR SINE MIR -44 218 20 210 204 45 0 chr10 70919964 70920008 -69396757 + L2 LINE L2 3217 3262 -10 546 310 52 17 chr10 70921279 70921453 -69395312 - MIR3 SINE MIR -15 193 14 570 162 186 73 chr10 70922905 70923109 -69393656 + ORSL DNA AcHobo 3 229 -46 1561 130 0 22 chr10 70923262 70923493 -69393272 - AluJo SINE Alu 0 312 87 229 250 97 14 chr10 70923495 70923567 -69393198 - MIR SINE MIR -62 146 69 195 42 0 0 chr10 70924185 70924209 -69392556 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 268 212 26 88 chr10 70926961 70927074 -69389691 + MIR3 SINE MIR 94 199 -9 195 308 0 0 chr10 70931233 70931353 -69385412 + (TG)n Simple_repeat Simple_repeat 1 120 0 507 249 113 17 chr10 70931864 70931970 -69384795 + MIR SINE MIR 63 157 -105 1906 169 0 17 chr10 70931970 70932266 -69384499 + AluJo SINE Alu 1 291 -21 507 249 113 17 chr10 70932266 70932336 -69384429 + MIR SINE MIR 157 256 -6 2256 87 0 0 chr10 70932486 70932762 -69384003 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr10 70932764 70932789 -69383976 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 543 96 0 0 chr10 70933626 70933709 -69383056 + (CA)n Simple_repeat Simple_repeat 2 84 0 2207 105 10 3 chr10 70934154 70934449 -69382316 + AluSx SINE Alu 1 297 -15 242 248 40 50 chr10 70935374 70935475 -69381290 + MIR SINE MIR 38 137 -71 2320 91 0 7 chr10 70936548 70936855 -69379910 + AluSc SINE Alu 1 305 -4 2402 76 3 22 chr10 70937529 70937845 -69378920 - AluSg SINE Alu 0 310 1 236 146 0 21 chr10 70938898 70938946 -69377819 + (TTTTC)n Simple_repeat Simple_repeat 3 49 0 1919 178 0 9 chr10 70938948 70939263 -69377502 - AluJb SINE Alu 0 312 1 2305 92 0 0 chr10 70940489 70940782 -69375983 + AluSx SINE Alu 1 293 -19 314 317 122 23 chr10 70940798 70941019 -69375746 + MIR SINE MIR 13 255 -7 613 206 27 76 chr10 70943827 70944011 -69372754 - MER5B DNA MER1_type -2 176 2 847 274 72 31 chr10 70944177 70944574 -69372191 + Charlie8 DNA MER1_type 1 401 -2016 309 260 192 0 chr10 70945095 70945199 -69371566 + MIR3 SINE MIR 62 185 -23 341 264 14 0 chr10 70947171 70947243 -69369522 + MIR SINE MIR 189 261 -1 440 105 0 23 chr10 70947437 70947523 -69369242 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 354 82 0 0 chr10 70948103 70948152 -69368613 + MADE1 DNA Mariner 27 75 -5 282 281 59 0 chr10 70948329 70948452 -69368313 + MIR SINE MIR 117 247 -15 2330 99 3 3 chr10 70948592 70948896 -69367869 - AluSx SINE Alu -8 304 1 912 241 5 0 chr10 70949962 70950169 -69366596 + MER3 DNA MER1_type 1 208 -1 362 326 67 91 chr10 70950489 70950801 -69365964 + L2 LINE L2 2809 3135 -137 252 0 0 0 chr10 70950801 70950829 -69365936 + (T)n Simple_repeat Simple_repeat 1 28 0 362 326 67 91 chr10 70950829 70950964 -69365801 + L2 LINE L2 3135 3272 0 282 305 252 7 chr10 70950990 70951141 -69365624 + MIR3 SINE MIR 2 189 -19 206 296 92 31 chr10 70951830 70951928 -69364837 - MIR SINE MIR -89 119 16 194 0 0 37 chr10 70953236 70953263 -69363502 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 236 51 0 26 chr10 70953779 70953818 -69362947 + (TCC)n Simple_repeat Simple_repeat 1 38 0 638 234 137 15 chr10 70955736 70955933 -69360832 + MIR SINE MIR 28 248 -14 297 351 13 20 chr10 70957516 70957667 -69359098 - MLT1K LTR MaLR 0 588 439 359 300 155 46 chr10 70957725 70958028 -69358737 - MLT1K LTR MaLR -238 350 15 322 276 49 8 chr10 70958069 70958225 -69358540 - MIR SINE MIR -64 144 29 266 321 12 0 chr10 70958646 70958727 -69358038 + MIR SINE MIR 65 146 -62 402 255 154 0 chr10 70958779 70958928 -69357837 + MER112 DNA MER1_type 27 198 -62 264 246 72 0 chr10 70959177 70959246 -69357519 + MIR3 SINE MIR 81 154 -54 860 302 62 33 chr10 70960048 70960349 -69356416 + MLT1L LTR MaLR 1 292 -323 2472 89 0 0 chr10 70960349 70960653 -69356112 + AluY SINE Alu 1 304 -7 860 302 62 33 chr10 70960653 70960905 -69355860 + MLT1L LTR MaLR 292 609 -6 1833 139 30 27 chr10 70960930 70961268 -69355497 - MER44D DNA MER2_type 0 609 1 573 339 95 15 chr10 70961273 70961819 -69354946 - L1MC4a LINE L1 -1926 5882 5293 2061 150 108 12 chr10 70962064 70962470 -69354295 + LTR36 LTR ERV1 2 446 -165 758 176 7 0 chr10 70962480 70962616 -69354149 + MLT1A1 LTR MaLR 228 364 -1 212 329 20 40 chr10 70963840 70963992 -69352773 + L2 LINE L2 2873 3021 -251 371 293 9 0 chr10 70963998 70964114 -69352651 + MER117 DNA MER1_type 81 197 0 338 346 43 12 chr10 70964329 70964491 -69352274 - MIR SINE MIR -76 186 20 268 284 21 53 chr10 70964606 70964701 -69352064 + MIR SINE MIR 80 171 -91 213 290 14 0 chr10 70965301 70965370 -69351395 - L2 LINE L2 0 3272 3203 533 255 0 32 chr10 70965600 70965757 -69351008 + MER117 DNA MER1_type 46 197 0 333 317 58 0 chr10 70965760 70965864 -69350901 + L2 LINE L2 3162 3271 -1 202 221 263 32 chr10 70965874 70965969 -69350796 - MIR SINE MIR -71 137 21 395 239 51 90 chr10 70966522 70966756 -69350009 + MLT1K LTR MaLR 358 582 -6 638 173 95 34 chr10 70967464 70967643 -69349122 - MIR SINE MIR 0 262 73 430 304 43 33 chr10 70968051 70968235 -69348530 + MIR SINE MIR 77 262 0 208 278 0 14 chr10 70968878 70968950 -69347815 - MIR SINE MIR -83 125 55 273 218 100 27 chr10 70969090 70969200 -69347565 + MIR SINE MIR 64 181 -81 2257 127 0 0 chr10 70969419 70969726 -69347039 + AluSx SINE Alu 1 307 -5 484 225 18 0 chr10 70969939 70970050 -69346715 - LTR16A LTR ERVL -113 337 225 534 236 16 0 chr10 70970815 70970942 -69345823 - FLAM_A SINE Alu -4 138 10 794 246 95 12 chr10 70970974 70971226 -69345539 + MLT1K LTR MaLR 314 586 -2 213 331 71 39 chr10 70971826 70971980 -69344785 - L2 LINE L2 -8 3264 3106 5189 52 9 0 chr10 70972429 70973425 -69343340 - L1P2 LINE L1 -474 5680 4674 2001 217 73 12 chr10 70973821 70974315 -69342450 - MLT1F LTR MaLR 0 542 19 413 192 34 0 chr10 70974350 70974456 -69342309 - MLT1-int LTR MaLR -30 1621 1247 301 312 236 11 chr10 70975697 70976078 -69340687 + L3 LINE CR1 1108 1574 -3 505 320 83 45 chr10 70976314 70976732 -69340033 + L2 LINE L2 1368 1824 -1490 2382 150 19 5 chr10 70976732 70977052 -69339713 - Tigger2a DNA MER2_type -2276 432 103 240 35 0 0 chr10 70977052 70977081 -69339684 + (GGA)n Simple_repeat Simple_repeat 2 30 0 2382 150 19 5 chr10 70977081 70977186 -69339579 - Tigger2a DNA MER2_type -2605 103 1 505 320 83 45 chr10 70977186 70977457 -69339308 + L2 LINE L2 1824 2083 -1231 2164 199 28 61 chr10 70977466 70978004 -69338761 + MLT1F LTR MaLR 1 520 -22 189 74 0 0 chr10 70978129 70978156 -69338609 + (TTG)n Simple_repeat Simple_repeat 3 29 0 2319 57 11 4 chr10 70979588 70979869 -69336896 - AluY SINE Alu 0 311 29 631 204 61 6 chr10 70980077 70980258 -69336507 - L1MDa LINE L1 -4784 1756 1566 2090 110 3 10 chr10 70980265 70980555 -69336210 - AluSx SINE Alu -24 288 1 1141 318 32 53 chr10 70980557 70981296 -69335469 - L1MDa LINE L1 -5637 1084 361 289 283 45 61 chr10 70981579 70981777 -69334988 + MLT1L LTR MaLR 421 615 0 378 313 129 41 chr10 70981810 70982401 -69334364 + L2 LINE L2 2223 2865 -449 254 282 74 100 chr10 70982481 70982832 -69333933 + L2 LINE L2 2931 3272 0 269 278 28 0 chr10 70983861 70983933 -69332832 + MER115 DNA AcHobo 617 690 -3 347 197 73 129 chr10 70984763 70984941 -69331824 + MLT1H LTR MaLR 382 549 0 212 299 15 0 chr10 70985121 70985188 -69331577 - MIR SINE MIR -105 103 36 429 351 5 27 chr10 70985891 70986079 -69330686 + MIR3 SINE MIR 15 198 -10 850 278 24 4 chr10 70986118 70986373 -69330392 - MIR SINE MIR 0 262 3 253 264 0 0 chr10 70986719 70986772 -69329993 + L2 LINE L2 3213 3265 -7 212 245 0 0 chr10 70987651 70987700 -69329065 + MIR SINE MIR 75 123 -85 200 290 72 0 chr10 70987884 70987953 -69328812 + MIR SINE MIR 174 247 -15 186 189 0 0 chr10 70988816 70988853 -69327912 + GA-rich Low_complexity Low_complexity 4 40 0 241 341 47 8 chr10 70989254 70989383 -69327382 + L2 LINE L2 3107 3240 -73 195 276 0 0 chr10 70989575 70989651 -69327114 + (CA)n Simple_repeat Simple_repeat 1 76 0 408 250 0 0 chr10 70990398 70990486 -69326279 - MIR SINE MIR -122 140 53 188 158 26 0 chr10 70991033 70991071 -69325694 + MIR SINE MIR 114 152 -56 220 186 76 0 chr10 70991269 70991335 -69325430 - MIR SINE MIR -90 118 42 552 210 101 7 chr10 70992027 70992165 -69324600 + MIR SINE MIR 46 196 -66 378 241 108 0 chr10 70992217 70992300 -69324465 - REP3 LTR ERV -469 93 2 2236 102 7 0 chr10 70992312 70992607 -69324158 - AluSq SINE Alu -16 297 1 578 254 79 6 chr10 70992766 70992943 -69323822 - MIR SINE MIR -44 218 29 237 329 0 12 chr10 70993014 70993099 -69323666 + L2 LINE L2 3180 3263 -50 882 238 24 19 chr10 70993128 70993334 -69323431 + LTR16C LTR ERVL 67 273 -218 287 162 176 14 chr10 70993349 70993423 -69323342 + MER21B LTR ERV1 5 90 -773 30 69 0 0 chr10 70993461 70993519 -69323246 + AT_rich Low_complexity Low_complexity 1 58 0 1536 219 82 57 chr10 70993528 70993676 -69323089 + MER21B LTR ERV1 40 183 -680 2270 115 3 0 chr10 70993676 70993981 -69322784 - AluY SINE Alu -4 307 2 1536 219 82 57 chr10 70993981 70994306 -69322459 + MER21B LTR ERV1 183 525 -338 801 221 24 29 chr10 70994471 70994679 -69322086 + LTR16C LTR ERVL 285 491 0 2129 116 0 11 chr10 70994766 70995089 -69321676 - AluSx SINE Alu 0 320 1 197 207 69 0 chr10 70995317 70995375 -69321390 - L2 LINE L2 -218 3054 2993 459 299 65 0 chr10 70995476 70995630 -69321135 + MIR SINE MIR 62 225 -37 269 276 5 25 chr10 70995787 70995901 -69320864 + MIR SINE MIR 97 206 -56 312 228 24 100 chr10 70996016 70996186 -69320579 - MIR SINE MIR -11 197 39 236 260 0 0 chr10 70996702 70996775 -69319990 + (TAA)n Simple_repeat Simple_repeat 1 73 0 362 286 70 79 chr10 70996794 70997035 -69319730 - MIR SINE MIR -23 239 1 345 293 74 102 chr10 70997227 70997845 -69318920 + L1MC4a LINE L1 5521 6121 0 498 311 59 22 chr10 70998369 70998483 -69318282 + MIR SINE MIR 31 139 -123 1926 125 54 7 chr10 70998483 70998762 -69318003 + AluSx SINE Alu 1 292 -20 498 311 59 22 chr10 70998762 70998869 -69317896 + MIR SINE MIR 139 260 -2 769 189 91 0 chr10 70999126 70999301 -69317464 - MER46C DNA MER2_type -142 196 6 422 263 110 0 chr10 70999369 70999487 -69317278 - MIR SINE MIR -85 177 47 337 302 112 11 chr10 71000571 71000750 -69316015 + MIR SINE MIR 9 205 -57 687 83 51 13 chr10 71001480 71001637 -69315128 + (TAGA)n Simple_repeat Simple_repeat 1 163 0 4226 188 31 29 chr10 71002668 71003931 -69312834 - L1MB8 LINE L1 -15 6163 4923 479 327 24 21 chr10 71003933 71004263 -69312502 - L1M4 LINE L1 -964 5182 4852 375 240 56 41 chr10 71004264 71004425 -69312340 + MIR SINE MIR 42 198 -64 2076 120 30 0 chr10 71004427 71004726 -69312039 - AluSx SINE Alu -4 308 1 189 121 0 0 chr10 71005311 71005344 -69311421 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 385 112 272 41 chr10 71006059 71006185 -69310580 - MIR3 SINE MIR -8 200 44 24 0 0 0 chr10 71006416 71006440 -69310325 + AT_rich Low_complexity Low_complexity 1 24 0 258 136 0 0 chr10 71007510 71007554 -69309211 + (TGAA)n Simple_repeat Simple_repeat 4 47 0 517 250 110 0 chr10 71007987 71008123 -69308642 - MER117 DNA MER1_type -46 151 1 278 290 140 0 chr10 71008368 71008504 -69308261 - MIR3 SINE MIR -27 181 22 1616 137 3 68 chr10 71009972 71010293 -69306472 - AluJo SINE Alu -12 300 1 857 223 84 17 chr10 71010396 71010634 -69306131 + MIR SINE MIR 9 262 0 234 316 25 0 chr10 71011528 71011607 -69305158 + MIR3 SINE MIR 76 156 -52 237 292 0 0 chr10 71011887 71012024 -69304741 + (TG)n Simple_repeat Simple_repeat 2 138 0 267 235 0 0 chr10 71012037 71012135 -69304630 + (TG)n Simple_repeat Simple_repeat 1 98 0 297 311 74 8 chr10 71012330 71012452 -69304313 - MIR SINE MIR -66 142 23 859 74 7 52 chr10 71012837 71012972 -69303793 - MER1B DNA MER1_type 0 339 211 469 249 69 0 chr10 71013177 71013334 -69303431 + L2 LINE L2 2852 3016 -256 180 255 0 21 chr10 71013896 71013943 -69302822 + L2 LINE L2 3266 3311 -2 180 0 0 0 chr10 71015538 71015558 -69301207 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 1800 165 0 22 chr10 71015562 71015878 -69300887 - AluJb SINE Alu -3 309 1 254 303 11 11 chr10 71016562 71016651 -69300114 + Charlie8 DNA MER1_type 177 265 -2152 242 304 0 33 chr10 71017311 71017403 -69299362 + L1ME1 LINE L1 6048 6136 -30 32 43 0 0 chr10 71017411 71017457 -69299308 + AT_rich Low_complexity Low_complexity 1 46 0 267 261 11 11 chr10 71017507 71017595 -69299170 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 267 289 13 0 chr10 71017707 71017783 -69298982 + MIR SINE MIR 186 262 0 205 387 36 0 chr10 71018268 71018379 -69298386 + L2 LINE L2 2951 3065 -207 2329 93 3 0 chr10 71018435 71018745 -69298020 - AluSx SINE Alu 0 312 2 335 169 34 79 chr10 71019267 71019356 -69297409 + MLT1E1 LTR MaLR 85 169 -424 1321 194 43 97 chr10 71019469 71019841 -69296924 + MLT1E1 LTR MaLR 301 652 -2 253 292 14 0 chr10 71019991 71020063 -69296702 + L3 LINE CR1 1490 1562 -15 325 218 175 25 chr10 71020696 71020861 -69295904 - MIR SINE MIR -38 224 37 458 348 59 8 chr10 71021600 71021836 -69294929 - MIR SINE MIR -1 261 14 1453 188 134 44 chr10 71022982 71023389 -69293376 + L1ME2 LINE L1 5724 6161 -3 1918 130 28 0 chr10 71023438 71023723 -69293042 - AluSx SINE Alu -19 293 1 1088 184 28 28 chr10 71025057 71025275 -69291490 + MER20 DNA MER1_type 2 219 0 2966 86 86 14 chr10 71026118 71026551 -69290214 + MER4C LTR ERV1 1 464 -1 275 315 56 0 chr10 71029201 71029344 -69287421 + MER103 DNA DNA 8 158 -8 28 0 0 0 chr10 71029349 71029377 -69287388 + AT_rich Low_complexity Low_complexity 1 28 0 2453 149 10 8 chr10 71030190 71030585 -69286180 + MLT1C LTR MaLR 72 467 0 303 252 122 41 chr10 71030651 71030798 -69285967 - MIR3 SINE MIR -37 171 13 1369 241 40 50 chr10 71030804 71031182 -69285583 - MLT1A2 LTR MaLR 0 374 1 647 173 33 13 chr10 71032062 71032212 -69284553 - MER103 DNA DNA -1 165 13 180 0 0 0 chr10 71033664 71033684 -69283081 + (GGA)n Simple_repeat Simple_repeat 3 22 0 253 321 48 30 chr10 71036328 71036496 -69280269 - MIR SINE MIR -12 250 80 672 294 94 0 chr10 71040058 71040293 -69276472 + MIR SINE MIR 6 262 0 283 253 0 19 chr10 71041591 71041690 -69275075 + MIR SINE MIR 17 111 -97 568 302 167 19 chr10 71042525 71042783 -69273982 - L3 LINE CR1 -15 1562 1267 215 263 53 0 chr10 71043543 71043600 -69273165 + MIR SINE MIR 35 94 -168 1131 154 11 15 chr10 71043610 71043842 -69272923 + MSTD LTR MaLR 1 236 -221 1401 208 54 23 chr10 71043937 71044296 -69272469 + MSTD LTR MaLR 76 396 0 304 304 59 15 chr10 71044298 71044433 -69272332 + MIR SINE MIR 121 261 -1 2342 94 0 0 chr10 71044570 71044877 -69271888 + AluSc SINE Alu 3 309 0 510 272 122 72 chr10 71044892 71045346 -69271419 + MLT1H LTR MaLR 21 549 0 189 254 36 18 chr10 71046095 71046150 -69270615 + MIR SINE MIR 87 142 -66 219 69 0 0 chr10 71046674 71046703 -69270062 + (A)n Simple_repeat Simple_repeat 1 29 0 217 257 110 64 chr10 71049185 71049294 -69267471 + MIR SINE MIR 38 151 -111 381 372 9 13 chr10 71049404 71049635 -69267130 + MER102a DNA MER1_type 101 330 0 294 380 41 0 chr10 71050700 71050821 -69265944 - MIR SINE MIR -63 145 20 274 315 117 0 chr10 71051224 71051335 -69265430 + MIR SINE MIR 125 248 -14 425 268 8 6 chr10 71052081 71052247 -69264518 + MIR SINE MIR 16 157 -105 * 702 225 126 0 chr10 71052246 71052428 -69264337 - MIR SINE MIR 0 262 58 289 313 109 43 chr10 71052559 71052789 -69263976 + L2 LINE L2 2525 2769 -545 1229 94 0 6 chr10 71052791 71052951 -69263814 - AluSg/x SINE Alu -12 300 142 1826 88 24 24 chr10 71052959 71053255 -69263510 - AluY SINE Alu -15 296 1 317 105 0 5 chr10 71055362 71055420 -69261345 + L1MB2 LINE L1 6101 6168 -15 555 188 188 0 chr10 71055424 71055550 -69261215 - FLAM_A SINE Alu 0 144 1 1772 245 41 14 chr10 71055583 71056139 -69260626 + L1MB7 LINE L1 2269 2839 -3307 1074 169 11 5 chr10 71056153 71056342 -69260423 - AluJb SINE Alu -3 309 120 985 207 54 38 chr10 71057734 71058048 -69258717 + L1MB7 LINE L1 3168 3486 -2660 1318 193 15 35 chr10 71058048 71058307 -69258458 + AluJb SINE Alu 1 254 -58 4240 224 22 18 chr10 71058307 71059412 -69257353 + L1MB7 LINE L1 4141 5249 -897 4694 154 38 19 chr10 71059895 71060769 -69255996 + L1MB7 LINE L1 5276 6165 -19 412 216 11 0 chr10 71060818 71060906 -69255859 + L1ME2 LINE L1 6076 6164 0 5407 178 73 38 chr10 71062213 71062848 -69253917 + L1MCa LINE L1 32 730 -5696 2376 80 0 13 chr10 71062848 71063148 -69253617 + AluY SINE Alu 1 296 -15 5407 178 73 38 chr10 71063148 71063682 -69253083 + L1MCa LINE L1 730 1243 -5183 2260 125 0 0 chr10 71063819 71064123 -69252642 + AluSx SINE Alu 1 304 -8 3684 172 19 18 chr10 71064126 71065181 -69251584 + L1MB3 LINE L1 4608 5662 -521 1793 161 7 0 chr10 71065182 71065468 -69251297 + L1MB3 LINE L1 5889 6176 -7 828 162 0 0 chr10 71065515 71065626 -69251139 + FLAM_C SINE Alu 6 116 -27 657 69 0 0 chr10 71065627 71065714 -69251051 + (GGAAA)n Simple_repeat Simple_repeat 2 88 0 404 117 70 16 chr10 71065762 71065890 -69250875 + CT-rich Low_complexity Low_complexity 5 139 0 207 288 38 30 chr10 71066972 71067104 -69249661 + A-rich Low_complexity Low_complexity 6 138 0 245 282 6 58 chr10 71067146 71067302 -69249463 + GA-rich Low_complexity Low_complexity 1 148 0 263 137 0 20 chr10 71067416 71067467 -69249298 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 5821 147 31 16 chr10 71067468 71068481 -69248284 + L1MC1 LINE L1 5297 6324 -9 10910 126 43 18 chr10 71068481 71071579 -69245186 + L1PB1 LINE L1 2 3316 -3546 787 102 83 0 chr10 71071580 71071688 -69245077 + AluSp SINE Alu 2 118 -195 251 179 13 51 chr10 71071827 71071905 -69244860 + GA-rich Low_complexity Low_complexity 1 75 0 562 221 54 29 chr10 71072066 71072273 -69244492 + L1M4 LINE L1 1214 1433 -4847 2197 186 22 26 chr10 71072278 71072855 -69243910 - L1M4 LINE L1 -452 5726 5152 2223 199 51 11 chr10 71072871 71073435 -69243330 + L1M4 LINE L1 4875 5436 -946 1723 92 13 21 chr10 71073439 71073677 -69243088 + AluSx SINE Alu 1 236 -76 12117 174 21 25 chr10 71073763 71074488 -69242277 + L1PB1 LINE L1 3296 4022 -2845 2392 77 7 0 chr10 71074488 71074788 -69241977 + AluY SINE Alu 1 302 -9 12117 174 21 25 chr10 71074788 71077265 -69239500 + L1PB1 LINE L1 4022 6484 -383 351 0 0 0 chr10 71077265 71077304 -69239461 + (TG)n Simple_repeat Simple_repeat 2 40 0 12117 174 21 25 chr10 71077304 71077687 -69239078 + L1PB1 LINE L1 6484 6867 0 289 301 16 47 chr10 71077742 71077935 -69238830 + HAL1b LINE L1 90 276 -1072 1552 153 8 0 chr10 71077941 71078189 -69238576 + L1MA3 LINE L1 6041 6290 -15 32 0 0 23 chr10 71078192 71078205 -69238560 + AT_rich Low_complexity Low_complexity 1 13 -29 2324 93 3 0 chr10 71078205 71078495 -69238270 - AluSp SINE Alu -22 291 1 32 0 0 23 chr10 71078495 71078524 -69238241 + AT_rich Low_complexity Low_complexity 13 42 0 1921 155 3 0 chr10 71078535 71078831 -69237934 + AluJb SINE Alu 1 297 -15 189 0 0 0 chr10 71078840 71078861 -69237904 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 644 304 48 31 chr10 71078861 71079219 -69237546 + HAL1b LINE L1 270 633 -715 2241 97 13 7 chr10 71079457 71079755 -69237010 - AluSg SINE Alu -10 300 1 1473 181 28 129 chr10 71080001 71080388 -69236377 + MER7A DNA MER2_type 1 346 0 1688 141 0 4 chr10 71080414 71080690 -69236075 - AluSx SINE Alu 0 312 38 2285 228 75 65 chr10 71080746 71081633 -69235132 + L1MC5 LINE L1 6633 7528 -433 2027 248 123 22 chr10 71081716 71082344 -69234421 + L1MEc LINE L1 16 706 -5690 2399 233 90 47 chr10 71082352 71083341 -69233424 + L1MEc LINE L1 882 1913 -4483 402 266 43 63 chr10 71083334 71083541 -69233224 + L1ME3A LINE L1 5918 6120 -50 * 752 219 0 0 chr10 71083959 71084087 -69232678 + FLAM_C SINE Alu 3 130 -3 1440 102 66 37 chr10 71084092 71084336 -69232429 + AluSx SINE Alu 1 251 -61 301 340 78 7 chr10 71085464 71085617 -69231148 - MIR3 SINE MIR -28 180 17 30 27 0 0 chr10 71085740 71085777 -69230988 + AT_rich Low_complexity Low_complexity 1 37 0 691 224 112 0 chr10 71085867 71086046 -69230719 - MIR SINE MIR -1 261 63 4934 155 34 62 chr10 71088678 71088735 -69228030 - L1MA9 LINE L1 -5 6307 6250 4597 55 0 0 chr10 71088735 71089266 -69227499 - L1PA5 LINE L1 0 6154 5624 1721 170 91 9 chr10 71089266 71089584 -69227181 - MER2 DNA MER2_type 0 344 1 4934 155 34 62 chr10 71089584 71089900 -69226865 - L1MA9 LINE L1 -61 6251 5928 2218 114 0 13 chr10 71089900 71090206 -69226559 - AluSx SINE Alu -10 302 1 4934 155 34 62 chr10 71090206 71090354 -69226411 - L1MA9 LINE L1 -384 5928 5777 306 53 0 0 chr10 71090354 71090392 -69226373 - MADE1 DNA Mariner -42 38 1 453 36 0 0 chr10 71090397 71090452 -69226313 + (CA)n Simple_repeat Simple_repeat 2 56 0 4934 155 34 62 chr10 71090452 71090932 -69225833 - L1MA9 LINE L1 -539 5773 5308 207 0 0 0 chr10 71090932 71090955 -69225810 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4934 155 34 62 chr10 71090955 71091409 -69225356 - L1MA9 LINE L1 -1004 5308 4843 2111 162 61 56 chr10 71091837 71091907 -69224858 - MSTA LTR MaLR 0 428 360 3762 52 19 9 chr10 71091907 71092368 -69224397 + L1PA8 LINE L1 5707 6172 0 2111 162 61 56 chr10 71092368 71092723 -69224042 - MSTA LTR MaLR -68 360 1 9720 39 1 4 chr10 71093869 71094943 -69221822 - MER11C LTR ERVK 0 1071 1 600 50 0 0 chr10 71094994 71095074 -69221691 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 2117 111 42 0 chr10 71095284 71095573 -69221192 - AluSx SINE Alu -11 301 1 1303 186 99 19 chr10 71095653 71095791 -69220974 - Cheshire DNA MER1_type 0 2420 2295 234 0 0 0 chr10 71095791 71095817 -69220948 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1303 186 99 19 chr10 71095817 71096001 -69220764 - Cheshire DNA MER1_type -125 2295 2072 547 250 0 41 chr10 71096000 71096052 -69220713 - Cheshire DNA MER1_type -176 165 112 * 1794 173 3 22 chr10 71096052 71096370 -69220395 - AluJb SINE Alu 0 312 1 547 250 0 41 chr10 71096370 71096489 -69220276 - Cheshire DNA MER1_type -229 112 1 762 221 84 121 chr10 71096548 71097037 -69219728 - HAL1 LINE L1 -33 2474 2004 876 203 0 0 chr10 71097522 71097680 -69219085 - AluSg/x SINE Alu -18 292 135 807 189 0 0 chr10 71097853 71097980 -69218785 - FLAM_C SINE Alu -6 127 1 253 299 159 0 chr10 71098290 71098397 -69218368 + MIR SINE MIR 21 144 -64 23 54 0 0 chr10 71098562 71098599 -69218166 + AT_rich Low_complexity Low_complexity 1 37 0 669 183 0 0 chr10 71098604 71098708 -69218057 + FLAM_C SINE Alu 2 105 -38 7412 34 3 16 chr10 71098708 71099562 -69217203 + L1PA3 LINE L1 5308 6150 -5 613 231 122 55 chr10 71099656 71099894 -69216871 - MIR SINE MIR -1 261 8 864 140 0 22 chr10 71099896 71100032 -69216733 - FRAM SINE Alu -14 162 30 323 337 55 12 chr10 71100167 71100330 -69216435 - L3 LINE CR1 -8 1569 1400 2035 169 28 17 chr10 71100807 71101133 -69215632 + MLT1A1 LTR MaLR 1 333 -32 2033 176 27 0 chr10 71101133 71101468 -69215297 - MER2 DNA MER2_type 0 344 1 2035 169 28 17 chr10 71101468 71101502 -69215263 + MLT1A1 LTR MaLR 333 365 0 21 0 0 0 chr10 71102383 71102404 -69214361 + AT_rich Low_complexity Low_complexity 1 21 0 955 135 0 0 chr10 71102407 71102540 -69214225 - FLAM_C SINE Alu 0 133 1 1182 168 0 50 chr10 71103390 71103610 -69213155 - AluJo SINE Alu -12 300 92 24 0 0 0 chr10 71103888 71103912 -69212853 + AT_rich Low_complexity Low_complexity 1 24 0 204 103 73 73 chr10 71104011 71104079 -69212686 + (CCCCAG)n Simple_repeat Simple_repeat 3 70 0 573 165 0 9 chr10 71105465 71105574 -69211191 - FLAM_A SINE Alu 0 142 35 1007 278 78 21 chr10 71105713 71106148 -69210617 + L1MC4a LINE L1 5496 5955 -1853 824 150 23 0 chr10 71106302 71106469 -69210296 - AluSc SINE Alu 0 313 144 328 91 0 0 chr10 71106469 71106524 -69210241 - AluSg/x SINE Alu -132 170 122 200 258 16 65 chr10 71107212 71107274 -69209491 - L2 LINE L2 -16 3297 3239 520 234 29 41 chr10 71107835 71108006 -69208759 - MIR SINE MIR -1 261 93 23 0 0 0 chr10 71108720 71108743 -69208022 + AT_rich Low_complexity Low_complexity 1 23 0 2424 87 7 0 chr10 71109461 71109759 -69207006 - AluSx SINE Alu -12 300 1 1988 126 10 10 chr10 71110180 71110489 -69206276 + AluSx SINE Alu 1 309 -3 816 213 38 0 chr10 71110932 71111092 -69205673 + FRAM SINE Alu 1 166 0 1175 131 120 0 chr10 71112888 71113079 -69203686 + L1PB1 LINE L1 5907 6120 -31 189 0 0 0 chr10 71113100 71113121 -69203644 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2184 120 0 10 chr10 71114181 71114480 -69202285 + AluSx SINE Alu 1 296 -16 2560 112 0 3 chr10 71114598 71114954 -69201811 + THE1A LTR MaLR 1 355 0 1862 101 3 140 chr10 71115114 71115471 -69201294 - AluY SINE Alu -3 308 1 840 233 201 29 chr10 71115473 71115881 -69200884 + HAL1 LINE L1 813 1290 -1217 419 256 164 39 chr10 71115996 71116118 -69200647 + HAL1 LINE L1 1543 1648 -859 1703 123 46 102 chr10 71116118 71116442 -69200323 + AluJb SINE Alu 1 306 -6 419 256 164 39 chr10 71116442 71116631 -69200134 + HAL1 LINE L1 1648 1893 -614 2977 208 56 13 chr10 71116772 71117384 -69199381 - MER82 DNA MER2_type -14 639 2 256 292 36 48 chr10 71117677 71117845 -69198920 + HAL1b LINE L1 714 879 -469 234 214 135 56 chr10 71117982 71118108 -69198657 + HAL1 LINE L1 2227 2362 -145 2468 225 34 9 chr10 71118355 71118923 -69197842 - MER119 DNA MER1_type -1 582 1 438 158 18 79 chr10 71119050 71119164 -69197601 - MER104 DNA Tc2 -73 107 1 2080 120 20 3 chr10 71120581 71120881 -69195884 - AluSq SINE Alu -8 305 1 612 206 0 0 chr10 71121056 71121197 -69195568 + (TG)n Simple_repeat Simple_repeat 1 141 0 6189 102 77 85 chr10 71121638 71122768 -69193997 - Tigger3b DNA MER2_type -1797 1231 109 2109 127 0 0 chr10 71122768 71123071 -69193694 + AluSx SINE Alu 1 303 0 6189 102 77 85 chr10 71123071 71123142 -69193623 - Tigger3b DNA MER2_type -2919 109 39 2406 112 31 25 chr10 71124621 71124979 -69191786 + THE1B LTR MaLR 5 364 0 1136 172 68 11 chr10 71125021 71125417 -69191348 - MLT1D LTR MaLR 0 505 1 23 0 0 0 chr10 71126665 71126688 -69190077 + AT_rich Low_complexity Low_complexity 1 23 0 343 164 68 0 chr10 71127230 71127303 -69189462 - MER5A DNA MER1_type -102 87 10 2141 88 0 52 chr10 71127378 71127685 -69189080 + AluSx SINE Alu 2 292 -20 1062 41 8 0 chr10 71127685 71127807 -69188958 + AluY SINE Alu 1 123 -188 24 32 0 0 chr10 71127807 71127838 -69188927 + AT_rich Low_complexity Low_complexity 1 31 0 257 326 21 0 chr10 71127838 71127931 -69188834 - MER5A DNA MER1_type -49 140 33 232 231 185 0 chr10 71128688 71128753 -69188012 + MIR SINE MIR 183 259 -3 232 339 110 0 chr10 71129046 71129164 -69187601 - L2 LINE L2 -3 3269 3139 460 151 151 9 chr10 71129324 71129430 -69187335 - MER5B DNA MER1_type -51 127 7 369 0 0 0 chr10 71129660 71129701 -69187064 + (CA)n Simple_repeat Simple_repeat 1 41 0 2385 84 3 0 chr10 71130092 71130388 -69186377 + AluSp SINE Alu 1 297 -16 224 263 59 40 chr10 71130422 71130548 -69186217 - L2 LINE L2 -876 2438 2307 1743 156 3 61 chr10 71130548 71130695 -69186070 + AluJo SINE Alu 1 120 -192 2313 112 0 10 chr10 71130695 71131008 -69185757 + AluSq SINE Alu 2 311 -2 1743 156 3 61 chr10 71131008 71131187 -69185578 + AluJo SINE Alu 120 308 -4 295 282 53 24 chr10 71131193 71131391 -69185374 + MIR SINE MIR 2 259 -3 1314 81 25 0 chr10 71131891 71132089 -69184676 + L1MA2 LINE L1 6102 6304 0 3359 123 12 80 chr10 71132107 71132232 -69184533 + L1MB4 LINE L1 5551 5683 -497 2535 55 13 0 chr10 71132232 71132541 -69184224 + AluSp SINE Alu 1 313 0 3359 123 12 80 chr10 71132541 71133076 -69183689 + L1MB4 LINE L1 5683 6166 -14 283 310 10 0 chr10 71133079 71133179 -69183586 + Charlie4 DNA MER1_type 1861 1961 0 471 189 24 71 chr10 71134342 71134469 -69182296 + MER91B DNA MER1_type 10 130 -60 809 149 11 103 chr10 71134500 71134675 -69182090 + AluSg/x SINE Alu 137 295 -17 1763 156 0 21 chr10 71134696 71134979 -69181786 - AluJb SINE Alu -12 300 24 298 232 0 0 chr10 71134986 71135042 -69181723 + MER91B DNA MER1_type 135 190 0 873 188 135 96 chr10 71135435 71135812 -69180953 + LTR37B LTR ERV1 9 400 -68 777 196 14 0 chr10 71135812 71135955 -69180810 + AluJb SINE Alu 145 289 -23 1195 179 144 12 chr10 71136538 71136795 -69179970 - AluJb SINE Alu -11 291 1 301 243 0 0 chr10 71136795 71136869 -69179896 - MER31-int LTR ERV1 -2494 2629 2556 472 228 59 43 chr10 71136910 71137223 -69179542 - MER31-int LTR ERV1 -3521 1415 1192 296 156 156 9 chr10 71137236 71137345 -69179420 - AluSc SINE Alu -2 297 173 1244 77 18 12 chr10 71137626 71137795 -69178970 - THE1C LTR MaLR -205 170 1 604 266 96 7 chr10 71138794 71139065 -69177700 + L1MCa LINE L1 2064 2358 -4068 642 209 0 0 chr10 71139074 71139184 -69177581 + FLAM_A SINE Alu 4 113 -29 592 251 33 47 chr10 71139204 71139419 -69177346 + L1MCa LINE L1 2390 2601 -4006 339 276 99 46 chr10 71140440 71140465 -69176300 + L1ME LINE L1 43 65 -6005 645 227 8 8 chr10 71140465 71140593 -69176172 + FLAM_A SINE Alu 1 128 -5 339 276 99 46 chr10 71140593 71140719 -69176046 + L1ME LINE L1 65 202 -5868 260 197 141 14 chr10 71141426 71141497 -69175268 - L2 LINE L2 -7 3265 3186 465 363 0 20 chr10 71141656 71141857 -69174908 + LTR67 LTR ERVL 65 261 -296 350 300 50 0 chr10 71141964 71142084 -69174681 + LTR67 LTR ERVL 432 557 0 1997 166 9 50 chr10 71142191 71142612 -69174153 - L1MD3 LINE L1 -22 7973 7570 2641 146 39 0 chr10 71142616 71143026 -69173739 - MSTB LTR MaLR 0 426 1 220 189 75 0 chr10 71143034 71143087 -69173678 - MIR SINE MIR -147 115 59 319 282 86 0 chr10 71143545 71143662 -69173103 + L2 LINE L2 3137 3263 -9 240 35 0 0 chr10 71144200 71144229 -69172536 + (TG)n Simple_repeat Simple_repeat 1 29 0 566 197 8 25 chr10 71145772 71145894 -69170871 - MER34 LTR ERV1 -421 121 2 345 223 146 0 chr10 71146170 71146273 -69170492 - L2 LINE L2 -2 3311 3194 341 283 51 43 chr10 71146440 71146578 -69170187 + MIR SINE MIR 51 189 -73 206 234 0 0 chr10 71146628 71146675 -69170090 + (AATTG)n Simple_repeat Simple_repeat 5 51 0 7394 139 25 41 chr10 71146904 71148311 -69168454 - L1P LINE L1 -4075 2071 688 302 216 125 0 chr10 71148438 71148526 -69168239 + MIR SINE MIR 56 154 -108 1235 287 84 23 chr10 71148717 71149146 -69167619 + MLT1J LTR MaLR 56 510 -1 6010 202 10 1 chr10 71149726 71150792 -69165973 + LTR49-int LTR ERV1 715 1790 -6023 322 206 43 22 chr10 71151396 71151488 -69165277 - HAL1 LINE L1 -343 2164 2071 1168 114 148 0 chr10 71152298 71152474 -69164291 - AluSx SINE Alu -110 202 1 6700 26 18 0 chr10 71153738 71155033 -69161732 - L1PA3 LINE L1 -225 5930 4613 1525 108 0 5 chr10 71155167 71155371 -69161394 - AluSq SINE Alu -110 203 1 277 299 104 34 chr10 71155372 71155670 -69161095 + L1M4 LINE L1 3802 4120 -2026 558 279 108 28 chr10 71155694 71155981 -69160784 + L2 LINE L2 2238 2547 -767 222 175 18 35 chr10 71156398 71156455 -69160310 + CT-rich Low_complexity Low_complexity 5 60 0 509 207 122 58 chr10 71157105 71157352 -69159413 - LTR41 LTR ERVL 0 795 513 350 198 222 60 chr10 71157660 71157827 -69158938 - LTR41 LTR ERVL -579 194 1 7683 171 43 40 chr10 71158042 71159733 -69157032 + LTR49-int LTR ERV1 4074 5769 -562 956 166 12 6 chr10 71160879 71161042 -69155723 - FRAM SINE Alu -16 160 1 1707 154 28 11 chr10 71161787 71162073 -69154692 + AluJb SINE Alu 2 292 -20 272 200 50 0 chr10 71162113 71162173 -69154592 - FAM SINE Alu -1 178 116 445 299 13 39 chr10 71162258 71162653 -69154112 + CT-rich Low_complexity Low_complexity 1 384 0 272 229 12 0 chr10 71162675 71162758 -69154007 + C-rich Low_complexity Low_complexity 2 85 0 182 98 37 49 chr10 71163157 71163239 -69153526 + (CCCCG)n Simple_repeat Simple_repeat 4 84 0 2582 162 209 7 chr10 71163449 71164004 -69152761 + Tigger1 DNA MER2_type 2 668 -1750 1750 110 99 14 chr10 71164014 71164296 -69152469 + Tigger1 DNA MER2_type 861 1166 -1252 228 0 0 0 chr10 71164296 71164322 -69152443 + Tigger1 DNA MER2_type 1133 1158 -1260 361 143 0 0 chr10 71164324 71164380 -69152385 + Tigger1 DNA MER2_type 1127 1182 -1236 7321 131 44 29 chr10 71165514 71165787 -69150978 + Tigger1 DNA MER2_type 1166 1434 -984 2538 7 0 0 chr10 71165787 71166057 -69150708 + AluYa5 SINE Alu 37 306 -5 7321 131 44 29 chr10 71166057 71167017 -69149748 + Tigger1 DNA MER2_type 1434 2417 -1 1895 137 3 47 chr10 71167471 71167792 -69148973 + AluJo SINE Alu 1 307 -5 1131 141 0 0 chr10 71168223 71168386 -69148379 + AluSg/x SINE Alu 136 298 -14 2233 96 10 3 chr10 71169092 71169383 -69147382 + AluSq SINE Alu 13 305 -8 659 195 0 0 chr10 71169604 71169727 -69147038 - AluJb SINE Alu -23 289 167 218 344 50 22 chr10 71169806 71169986 -69146779 - MIR SINE MIR -58 204 20 1163 216 92 10 chr10 71172378 71172683 -69144082 - MER58B DNA MER1_type -3 338 9 2460 46 0 0 chr10 71172867 71173177 -69143588 - AluY SINE Alu 0 310 1 1616 188 0 4 chr10 71173511 71173783 -69142982 + AluJo SINE Alu 5 275 -37 252 0 0 0 chr10 71173791 71173819 -69142946 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2104 109 32 0 chr10 71174088 71174372 -69142393 - AluSg SINE Alu -16 294 2 1800 141 13 20 chr10 71174548 71174854 -69141911 - AluSx SINE Alu -8 304 1 225 0 0 0 chr10 71176260 71176285 -69140480 + (A)n Simple_repeat Simple_repeat 1 25 0 273 307 141 3 chr10 71178284 71178418 -69138347 + MIR SINE MIR 21 166 -62 189 107 0 0 chr10 71178981 71179009 -69137756 + (A)n Simple_repeat Simple_repeat 1 28 0 1663 134 0 13 chr10 71179523 71179762 -69137003 - AluSx SINE Alu -76 236 1 22 0 0 0 chr10 71180308 71180330 -69136435 + AT_rich Low_complexity Low_complexity 1 22 0 326 353 158 5 chr10 71180490 71180711 -69136054 - L2 LINE L2 -1 3271 3017 227 269 214 43 chr10 71181119 71181353 -69135412 - L2 LINE L2 -1005 2309 2036 1746 163 7 33 chr10 71181384 71181690 -69135075 + AluJo SINE Alu 1 298 -14 2367 91 7 3 chr10 71182124 71182431 -69134334 + AluSg SINE Alu 1 308 -2 353 259 37 0 chr10 71182452 71182533 -69134232 + MER94 DNA DNA 47 130 -4 466 308 13 62 chr10 71183071 71183298 -69133467 + MER102b DNA MER1_type 126 341 0 21 71 0 0 chr10 71183730 71183772 -69132993 + AT_rich Low_complexity Low_complexity 1 42 0 280 244 17 78 chr10 71184117 71184232 -69132533 - L1ME4a LINE L1 -50 6071 5964 30 27 0 0 chr10 71184283 71184320 -69132445 + AT_rich Low_complexity Low_complexity 1 37 0 902 111 0 8 chr10 71184413 71184539 -69132226 + AluJb SINE Alu 1 125 -187 373 253 102 18 chr10 71185544 71185710 -69131055 + L1MC4 LINE L1 7688 7867 -175 514 221 66 16 chr10 71186560 71186682 -69130083 + FLAM_A SINE Alu 4 131 -2 1383 217 25 3 chr10 71187433 71187719 -69129046 + AluJo SINE Alu 1 292 -10 397 109 0 82 chr10 71187734 71187844 -69128921 + (GGAAA)n Simple_repeat Simple_repeat 2 102 0 185 109 73 0 chr10 71187834 71187889 -69128876 + GA-rich Low_complexity Low_complexity 1 59 0 * 315 191 0 0 chr10 71187901 71187969 -69128796 + T-rich Low_complexity Low_complexity 1 68 0 1661 99 0 0 chr10 71188186 71188398 -69128367 - AluSx SINE Alu -100 212 1 435 222 0 19 chr10 71189002 71189164 -69127601 + (CA)n Simple_repeat Simple_repeat 1 159 0 2421 74 0 13 chr10 71189689 71189988 -69126777 + AluSx SINE Alu 3 297 -15 1127 237 156 32 chr10 71190135 71190545 -69126220 - MLT1J LTR MaLR -50 461 1 1060 55 0 79 chr10 71190604 71190769 -69125996 - FRAM SINE Alu 0 176 25 666 230 218 0 chr10 71191537 71191794 -69124971 - MER5C DNA MER1_type -5 319 7 307 181 62 83 chr10 71191794 71191938 -69124827 + Charlie7 DNA MER1_type 2472 2612 0 2323 96 7 0 chr10 71192260 71192561 -69124204 + AluSx SINE Alu 1 303 -9 1472 185 45 0 chr10 71192860 71193152 -69123613 + MLT1A1 LTR MaLR 1 305 -60 977 165 0 12 chr10 71193153 71193323 -69123442 + FRAM SINE Alu 1 168 -8 391 149 0 30 chr10 71193327 71193394 -69123371 + MLT1A1 LTR MaLR 300 364 -1 266 211 53 35 chr10 71193815 71193872 -69122893 + MER3 DNA MER1_type 29 86 -123 921 96 13 83 chr10 71193872 71194029 -69122736 - FRAM SINE Alu -19 157 12 586 188 194 0 chr10 71194044 71194188 -69122577 - MER3 DNA MER1_type -83 126 2 2576 57 0 0 chr10 71195953 71196251 -69120514 + AluY SINE Alu 1 298 -13 1788 217 62 11 chr10 71196803 71197269 -69119496 - L1ME3A LINE L1 0 6170 5681 524 227 55 31 chr10 71198056 71198219 -69118546 + MIR SINE MIR 14 180 -82 449 199 206 46 chr10 71198388 71198694 -69118071 - L1MC5 LINE L1 -39 7922 7568 823 134 0 16 chr10 71198694 71198821 -69117944 + FLAM_A SINE Alu 1 125 -8 1772 155 9 38 chr10 71198828 71199144 -69117621 + AluJo SINE Alu 3 309 -3 508 240 7 7 chr10 71199144 71199298 -69117467 + GA-rich Low_complexity Low_complexity 1 154 0 1073 253 69 48 chr10 71199305 71199767 -69116998 - L1MC5 LINE L1 -385 7576 7105 2326 159 65 22 chr10 71201432 71201476 -69115289 - L1MB5 LINE L1 -8 6172 6131 2325 121 0 0 chr10 71201476 71201783 -69114982 - AluSx SINE Alu -5 307 1 2326 159 65 22 chr10 71201783 71201895 -69114870 - L1MB5 LINE L1 -49 6131 6025 4773 64 20 2 chr10 71201895 71202492 -69114273 - LTR14B LTR ERVK 0 608 1 2326 159 65 22 chr10 71202492 71202839 -69113926 - L1MB5 LINE L1 -155 6025 5661 2272 114 3 3 chr10 71203305 71203613 -69113152 + AluSg SINE Alu 3 310 0 831 130 0 43 chr10 71204235 71204373 -69112392 - FLAM_C SINE Alu 0 133 2 389 315 65 22 chr10 71204374 71204792 -69111973 + L1MEd LINE L1 1112 1633 -857 269 326 92 33 chr10 71205235 71205261 -69111504 + L1MEd LINE L1 447 470 -5649 2081 127 7 0 chr10 71205261 71205560 -69111205 + AluSp SINE Alu 1 301 -12 269 326 92 33 chr10 71205560 71205717 -69111048 + L1MEd LINE L1 470 641 -5478 246 233 0 81 chr10 71205720 71205806 -69110959 - HsTC2 DNA Tc2 -1816 82 4 202 300 88 0 chr10 71205984 71206064 -69110701 - L2 LINE L2 -1 3312 3226 2170 84 3 21 chr10 71207404 71207689 -69109076 + AluSq SINE Alu 24 303 -10 193 165 10 204 chr10 71208834 71208937 -69107828 + MER5A DNA MER1_type 51 135 -45 1851 159 43 7 chr10 71208947 71209248 -69107517 + AluJb SINE Alu 1 312 0 2141 167 110 2 chr10 71209258 71209714 -69107051 - MLT1D LTR MaLR 0 505 1 205 159 135 40 chr10 71210612 71210710 -69106055 + MER5C DNA MER1_type 4 115 -74 1628 142 19 71 chr10 71211617 71211941 -69104824 + AluJo SINE Alu 6 312 0 2433 82 0 0 chr10 71211997 71212291 -69104474 + AluSx SINE Alu 1 294 -18 2103 113 7 7 chr10 71214254 71214564 -69102201 + AluSx SINE Alu 2 311 0 2480 73 7 0 chr10 71215481 71215783 -69100982 - AluSp SINE Alu -9 304 1 2207 131 3 0 chr10 71216494 71216799 -69099966 + AluSx SINE Alu 1 306 -6 321 233 87 19 chr10 71219016 71219119 -69097646 - MIR SINE MIR -61 147 38 339 303 242 0 chr10 71219388 71219586 -69097179 + MIR SINE MIR 17 262 0 307 273 68 0 chr10 71219687 71219775 -69096990 + MER21B LTR ERV1 13 106 -757 * 350 254 0 0 chr10 71219773 71219844 -69096921 + MER21B LTR ERV1 19 89 -774 2447 216 134 27 chr10 71219847 71220588 -69096177 + MER21B LTR ERV1 43 862 -1 261 0 0 0 chr10 71222233 71222262 -69094503 + (A)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr10 71222266 71222289 -69094476 + (CAGGG)n Simple_repeat Simple_repeat 2 24 0 349 129 69 119 chr10 71222644 71222745 -69094020 + 7SLRNA srpRNA srpRNA 225 320 0 85 0 0 10 chr10 71222745 71222818 -69093947 + AT_rich Low_complexity Low_complexity 1 74 -21 2345 110 0 0 chr10 71222818 71223118 -69093647 + AluSp SINE Alu 1 300 -13 85 0 0 10 chr10 71223118 71223140 -69093625 + AT_rich Low_complexity Low_complexity 74 95 0 612 301 99 0 chr10 71223714 71223927 -69092838 + MIR SINE MIR 18 251 -11 2134 126 23 0 chr10 71224026 71224327 -69092438 - AluSx SINE Alu -4 308 1 240 253 74 32 chr10 71225527 71225622 -69091143 - L2 LINE L2 -5 3267 3169 1493 158 207 6 chr10 71225899 71226227 -69090538 + MSTD LTR MaLR 3 396 0 251 288 0 0 chr10 71226269 71226328 -69090437 - AluJo SINE Alu -135 167 109 688 129 0 0 chr10 71226328 71226429 -69090336 + AluJ/FLAM SINE Alu 2 102 -210 651 163 34 20 chr10 71226617 71226764 -69090001 + LTR29 LTR ERV1 425 573 -49 211 248 159 18 chr10 71227347 71227460 -69089305 + MIR3 SINE MIR 65 193 -15 195 217 0 22 chr10 71227718 71227764 -69089001 - MIR SINE MIR -115 147 103 191 208 0 19 chr10 71228257 71228310 -69088455 - L2 LINE L2 -304 2968 2917 2070 134 0 26 chr10 71229210 71229515 -69087250 - AluSx SINE Alu -15 297 1 545 280 131 36 chr10 71229566 71229841 -69086924 + AluJo SINE Alu 1 301 -1 204 40 0 0 chr10 71229856 71229881 -69086884 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 530 204 0 0 chr10 71229885 71229973 -69086792 - FRAM SINE Alu -22 154 67 813 152 0 23 chr10 71229979 71230111 -69086654 - FLAM_C SINE Alu -7 136 8 245 269 13 13 chr10 71230116 71230194 -69086571 + MIR SINE MIR 169 246 -16 27 0 0 0 chr10 71230207 71230234 -69086531 + AT_rich Low_complexity Low_complexity 1 27 0 371 151 116 2 chr10 71230675 71230754 -69086011 + AluJ/FRAM SINE Alu 223 296 -6 2004 137 4 0 chr10 71230766 71231044 -69085721 + AluJb SINE Alu 13 291 -21 2779 157 51 13 chr10 71231069 71231597 -69085168 - L1MB7 LINE L1 -58 6126 5579 225 65 0 0 chr10 71231768 71231799 -69084966 + (CA)n Simple_repeat Simple_repeat 2 32 0 232 200 40 0 chr10 71233592 71233642 -69083123 + C-rich Low_complexity Low_complexity 6 57 0 531 0 0 0 chr10 71233950 71234009 -69082756 + (GA)n Simple_repeat Simple_repeat 2 60 0 472 275 58 19 chr10 71234151 71234358 -69082407 - L2 LINE L2 -8 3305 3091 1949 128 60 13 chr10 71234358 71234678 -69082087 + AluJo SINE Alu 1 312 0 225 212 18 142 chr10 71234882 71234916 -69081849 + MIR SINE MIR 148 185 -77 2131 113 28 0 chr10 71234916 71235207 -69081558 + AluSq SINE Alu 1 299 -14 225 212 18 142 chr10 71235207 71235285 -69081480 + MIR SINE MIR 185 246 -16 457 278 40 21 chr10 71235389 71235604 -69081161 - MIR SINE MIR 0 262 45 1889 122 49 0 chr10 71235637 71235900 -69080865 - AluSx SINE Alu -36 276 1 317 279 50 37 chr10 71237006 71237167 -69079598 - MLT1J1 LTR MaLR 0 446 284 1818 128 95 0 chr10 71237211 71237379 -69079386 - AluJo SINE Alu -13 299 94 369 0 0 0 chr10 71237379 71237420 -69079345 + (TG)n Simple_repeat Simple_repeat 2 42 0 1818 128 95 0 chr10 71237420 71237524 -69079241 - AluJo SINE Alu -218 94 1 2170 105 33 30 chr10 71237920 71238283 -69078482 - THE1B LTR MaLR 0 364 1 205 235 102 61 chr10 71238348 71238446 -69078319 + MIR SINE MIR 45 146 -62 3141 122 45 36 chr10 71238484 71239033 -69077732 - MER21A LTR ERV1 -2 929 376 745 175 226 9 chr10 71239038 71239255 -69077510 - MER21A LTR ERV1 -667 264 1 1925 162 7 0 chr10 71239668 71239976 -69076789 + AluJo SINE Alu 1 310 -2 637 245 39 15 chr10 71241153 71241357 -69075408 + L2 LINE L2 3092 3300 -13 441 0 0 0 chr10 71241357 71241406 -69075359 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 1295 229 23 23 chr10 71241462 71241812 -69074953 - L1MD3 LINE L1 -19 7976 7627 927 139 0 0 chr10 71241824 71241961 -69074804 - FRAM SINE Alu 0 40 1 726 191 0 8 chr10 71241965 71242091 -69074674 - FLAM_C SINE Alu -17 126 2 928 173 16 65 chr10 71242091 71242276 -69074489 - FRAM SINE Alu -1 175 1 324 226 0 0 chr10 71242276 71242338 -69074427 - L1MC4 LINE L1 -491 7551 7490 269 172 62 0 chr10 71242338 71242402 -69074363 + MADE1 DNA Mariner 1 68 -12 608 206 85 42 chr10 71242408 71242597 -69074168 - L1MC4 LINE L1 -555 7487 7291 664 188 8 0 chr10 71242609 71242726 -69074039 - FLAM_C SINE Alu -15 118 1 528 211 184 0 chr10 71242819 71242966 -69073799 + L1MC4a LINE L1 6422 6595 -1213 345 261 101 70 chr10 71242991 71243248 -69073517 + MER102b DNA MER1_type 72 336 -5 258 188 0 0 chr10 71243296 71243344 -69073421 - MIR SINE MIR -131 77 30 463 290 114 16 chr10 71244141 71244334 -69072431 - MIR SINE MIR -49 213 2 210 308 121 0 chr10 71244889 71244980 -69071785 + MIR3 SINE MIR 15 116 -92 544 268 84 16 chr10 71245038 71245228 -69071537 - MIR SINE MIR 0 262 60 196 159 0 68 chr10 71245404 71245448 -69071317 - MIR SINE MIR -89 119 81 207 227 13 40 chr10 71246485 71246560 -69070205 + (CGCGG)n Simple_repeat Simple_repeat 2 74 0 21 0 0 0 chr10 71246615 71246636 -69070129 + GC_rich Low_complexity Low_complexity 1 21 0 2383 88 7 7 chr10 71247470 71247777 -69068988 - AluSx SINE Alu -5 307 1 479 296 63 11 chr10 71247835 71248024 -69068741 - MIR SINE MIR 0 262 64 363 244 0 0 chr10 71248045 71248123 -69068642 - MIR SINE MIR -56 206 129 477 270 67 113 chr10 71248131 71248475 -69068290 + L1MC/D LINE L1 4502 4829 -1317 25 0 0 0 chr10 71249008 71249033 -69067732 + AT_rich Low_complexity Low_complexity 1 25 0 412 279 63 83 chr10 71249138 71249236 -69067529 + L1MC/D LINE L1 5022 5120 -1147 1936 107 0 38 chr10 71249236 71249553 -69067212 + AluSg SINE Alu 6 310 0 412 279 63 83 chr10 71249553 71249782 -69066983 + L1MC/D LINE L1 5120 5364 -903 2107 101 6 73 chr10 71249782 71250109 -69066656 - AluSx SINE Alu -7 305 1 412 279 63 83 chr10 71250109 71250171 -69066594 + L1MC/D LINE L1 5364 5426 -841 305 227 11 57 chr10 71250165 71250253 -69066512 + L1MC4 LINE L1 6614 6697 -1345 * 335 127 70 0 chr10 71250276 71250347 -69066418 + L1MC/D LINE L1 5406 5481 -2327 867 157 65 7 chr10 71250369 71250522 -69066243 + AluJb SINE Alu 125 286 -26 561 285 140 0 chr10 71250543 71250750 -69066015 - L2 LINE L2 -246 3067 2832 1848 223 55 49 chr10 71250762 71251273 -69065492 - LTR40a LTR ERVL -5 514 1 285 232 98 0 chr10 71251278 71251360 -69065405 - L2 LINE L2 -498 2816 2727 673 212 0 8 chr10 71251767 71251899 -69064866 - FLAM_C SINE Alu -1 132 2 1632 182 37 10 chr10 71251908 71252204 -69064561 - AluJo SINE Alu -8 304 1 1144 114 0 0 chr10 71252612 71252761 -69064004 - AluSc SINE Alu -160 149 1 2076 101 37 14 chr10 71252770 71253066 -69063699 - AluSc SINE Alu -6 303 1 826 184 0 0 chr10 71253785 71253910 -69062855 + FLAM_C SINE Alu 1 125 -18 449 297 0 16 chr10 71253926 71254054 -69062711 - L2 LINE L2 0 3313 3188 27 0 0 0 chr10 71254075 71254102 -69062663 + AT_rich Low_complexity Low_complexity 1 27 0 1417 211 39 4 chr10 71254116 71254396 -69062369 - AluJo SINE Alu -22 290 1 1939 151 0 3 chr10 71254480 71254794 -69061971 + AluJb SINE Alu 1 313 0 396 286 39 104 chr10 71255329 71255560 -69061205 + L1ME4a LINE L1 5874 6089 -32 731 183 8 0 chr10 71255562 71255693 -69061072 - FLAM_C SINE Alu -11 132 1 2177 127 3 0 chr10 71255739 71256039 -69060726 + AluSc SINE Alu 1 301 -8 5908 152 36 62 chr10 71256039 71257010 -69059755 + L1MC3 LINE L1 6068 7062 -723 1733 184 7 7 chr10 71257010 71257320 -69059445 + AluJo SINE Alu 1 310 -2 5908 152 36 62 chr10 71257320 71257743 -69059022 + L1MC3 LINE L1 7062 7494 -291 2178 103 10 10 chr10 71257743 71258045 -69058720 + AluSq SINE Alu 1 302 -11 5908 152 36 62 chr10 71258045 71258112 -69058653 + L1MC3 LINE L1 7494 7561 -224 2119 123 3 3 chr10 71258112 71258405 -69058360 + AluSx SINE Alu 1 293 -19 5908 152 36 62 chr10 71258405 71258462 -69058303 + L1MC3 LINE L1 7561 7618 -167 2376 103 0 3 chr10 71258462 71258774 -69057991 + AluSp SINE Alu 1 311 -2 5908 152 36 62 chr10 71258774 71258829 -69057936 + L1MC3 LINE L1 7618 7673 -112 1675 184 38 0 chr10 71258829 71259117 -69057648 + AluJb SINE Alu 1 299 -13 5908 152 36 62 chr10 71259117 71259305 -69057460 + L1MC3 LINE L1 7673 7778 -7 465 258 145 0 chr10 71259541 71259665 -69057100 + MIR SINE MIR 26 167 -95 254 293 12 49 chr10 71259660 71259729 -69057036 + L2 LINE L2 3234 3301 -12 * 1650 199 10 0 chr10 71259729 71260026 -69056739 + AluJb SINE Alu 1 300 -12 254 293 12 49 chr10 71260026 71260038 -69056727 + L2 LINE L2 3301 3312 -1 437 211 0 9 chr10 71260040 71260149 -69056616 + GA-rich Low_complexity Low_complexity 4 111 0 619 188 5 38 chr10 71260312 71260498 -69056267 + GA-rich Low_complexity Low_complexity 1 180 0 225 318 61 15 chr10 71260648 71260780 -69055985 + L2 LINE L2 2913 3050 -222 3662 144 22 77 chr10 71260857 71260986 -69055779 - L1MB7 LINE L1 -9 6175 6040 1662 150 0 11 chr10 71260986 71261246 -69055519 + AluJo SINE Alu 1 257 -55 3662 144 22 77 chr10 71261246 71261720 -69055045 - L1MB7 LINE L1 -144 6040 5541 192 77 0 0 chr10 71261720 71261746 -69055019 + (TA)n Simple_repeat Simple_repeat 2 27 0 1550 202 0 24 chr10 71261749 71261902 -69054863 - AluJo SINE Alu -18 294 150 2086 111 10 3 chr10 71261902 71262190 -69054575 - AluSx SINE Alu -22 290 1 1550 202 0 24 chr10 71262190 71262333 -69054432 - AluJo SINE Alu -162 150 5 3662 144 22 77 chr10 71262333 71262465 -69054300 - L1MB7 LINE L1 -645 5539 5476 1908 160 3 3 chr10 71262495 71262795 -69053970 - AluJb SINE Alu -8 304 5 660 240 20 0 chr10 71263136 71263282 -69053483 + MER5A DNA MER1_type 39 187 -2 679 295 82 19 chr10 71263399 71263765 -69053000 + L1ME4a LINE L1 5517 5905 -216 2446 50 0 0 chr10 71263779 71264102 -69052663 - AluY SINE Alu 0 323 1 3434 26 0 3 chr10 71264118 71264498 -69052267 - L1PA4 LINE L1 0 6155 5777 1777 102 121 11 chr10 71264498 71264763 -69052002 - AluSg SINE Alu -16 294 1 326 237 0 0 chr10 71264816 71264875 -69051890 + MER82 DNA MER2_type 1 59 -594 1780 165 7 13 chr10 71265002 71265311 -69051454 + AluJb SINE Alu 1 307 -5 2297 102 0 3 chr10 71265312 71265606 -69051159 + AluSx SINE Alu 2 294 -18 331 284 119 9 chr10 71266039 71266148 -69050617 - MIR SINE MIR -55 153 33 2154 114 0 3 chr10 71266300 71266590 -69050175 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr10 71266590 71266620 -69050145 + AT_rich Low_complexity Low_complexity 1 30 0 222 298 125 19 chr10 71266905 71267009 -69049756 - L2 LINE L2 -19 3253 3139 264 313 27 27 chr10 71267230 71267342 -69049423 - MIR3 SINE MIR -16 192 81 244 336 35 0 chr10 71267500 71267613 -69049152 + MIR SINE MIR 146 262 0 2070 121 7 3 chr10 71267762 71268052 -69048713 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr10 71268232 71268254 -69048511 + AT_rich Low_complexity Low_complexity 1 22 0 1040 197 14 23 chr10 71268521 71268739 -69048026 - MER58A DNA MER1_type 0 224 9 527 216 220 26 chr10 71268750 71269023 -69047742 - L1MC4a LINE L1 -1915 5893 5568 274 267 29 112 chr10 71269689 71269820 -69046945 + MIR SINE MIR 12 133 -75 1808 139 0 58 chr10 71269837 71270131 -69046634 + AluJo SINE Alu 1 277 -35 643 274 124 23 chr10 71270209 71270545 -69046220 + MLT1I LTR MaLR 34 404 -5 330 177 0 32 chr10 71270546 71270608 -69046157 + L2 LINE L2 3173 3232 -40 416 94 47 0 chr10 71270756 71270820 -69045945 + MLT1B LTR MaLR 15 81 -309 2224 101 3 7 chr10 71270828 71271126 -69045639 - AluSq SINE Alu -16 297 1 2403 197 20 45 chr10 71271147 71271564 -69045201 - L1PA15-16 LINE L1 -4289 2560 2159 2413 88 0 3 chr10 71271564 71271871 -69044894 - AluSc SINE Alu -3 306 1 2403 197 20 45 chr10 71271871 71272007 -69044758 - L1PA15-16 LINE L1 -4690 2159 2021 1949 87 0 8 chr10 71272014 71272267 -69044498 - L1PB1 LINE L1 -4 6147 5897 376 89 0 18 chr10 71272369 71272425 -69044340 + MLT1B LTR MaLR 64 118 -349 2138 110 0 0 chr10 71272425 71272716 -69044049 + AluSx SINE Alu 15 305 -7 938 178 27 139 chr10 71272726 71273057 -69043708 + MLT1B LTR MaLR 97 390 0 2384 105 0 0 chr10 71273365 71273671 -69043094 + AluSx SINE Alu 1 306 -6 1290 185 106 4 chr10 71273685 71273950 -69042815 + AluJb SINE Alu 5 296 -16 2956 217 194 32 chr10 71273963 71274900 -69041865 + L1MD2 LINE L1 21 804 -5602 2239 110 3 0 chr10 71274900 71275201 -69041564 + AluSp SINE Alu 1 302 -11 2956 217 194 32 chr10 71275201 71275385 -69041380 + L1MD2 LINE L1 804 957 -5449 2058 135 3 3 chr10 71275385 71275682 -69041083 + AluSx SINE Alu 1 297 -15 2956 217 194 32 chr10 71275682 71275774 -69040991 + L1MD2 LINE L1 957 1527 -4879 1904 221 79 27 chr10 71276189 71276819 -69039946 + L1MD2 LINE L1 2452 3114 -3292 4669 175 64 53 chr10 71276828 71277709 -69039056 + L1MD2 LINE L1 4828 5698 -921 1959 127 38 10 chr10 71277709 71278000 -69038765 + AluJb SINE Alu 1 299 -13 4669 175 64 53 chr10 71278000 71278887 -69037878 + L1MD2 LINE L1 5698 6619 0 2102 122 10 0 chr10 71278895 71279191 -69037574 + AluSx SINE Alu 1 299 -13 297 320 21 0 chr10 71279221 71279318 -69037447 - MIR SINE MIR -112 150 52 1922 139 0 23 chr10 71280231 71280534 -69036231 - AluJb SINE Alu -16 296 1 1232 162 0 178 chr10 71280884 71281243 -69035522 + AluJb SINE Alu 1 295 -17 2370 127 53 13 chr10 71281244 71281637 -69035128 + L1MA7 LINE L1 5883 6291 0 21 0 0 0 chr10 71281744 71281765 -69035000 + AT_rich Low_complexity Low_complexity 1 21 0 2129 96 25 0 chr10 71281939 71282220 -69034545 + AluSg1 SINE Alu 9 296 -13 24 32 0 0 chr10 71282544 71282575 -69034190 + AT_rich Low_complexity Low_complexity 1 31 0 2263 92 0 0 chr10 71283392 71283673 -69033092 + AluSc SINE Alu 1 281 -28 828 209 5 21 chr10 71283689 71283876 -69032889 + AluJo SINE Alu 104 287 -25 208 269 0 15 chr10 71284019 71284086 -69032679 + A-rich Low_complexity Low_complexity 4 69 0 219 69 0 0 chr10 71284753 71284782 -69031983 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 627 205 98 141 chr10 71284904 71285261 -69031504 + L1ME4a LINE L1 5492 5828 -293 1451 189 57 11 chr10 71285261 71285541 -69031224 + AluJo SINE Alu 1 293 -19 627 205 98 141 chr10 71285541 71285631 -69031134 + L1ME4a LINE L1 5828 5920 -201 2207 102 10 3 chr10 71285787 71286091 -69030674 + AluSq SINE Alu 1 306 -7 1648 160 46 11 chr10 71286212 71286494 -69030271 - AluJb SINE Alu -8 304 13 2091 141 0 3 chr10 71286672 71286971 -69029794 - AluJb SINE Alu -14 298 1 1840 144 18 0 chr10 71287962 71288239 -69028526 - AluJb SINE Alu -15 297 16 2452 57 10 3 chr10 71288645 71288942 -69027823 - AluY SINE Alu -12 299 1 1235 184 136 29 chr10 71289157 71289473 -69027292 - MER21B LTR ERV1 -105 758 409 2054 161 67 5 chr10 71289839 71290211 -69026554 - L1MC3 LINE L1 -469 7316 6922 2170 125 143 62 chr10 71290212 71290693 -69026072 + L1MB7 LINE L1 5634 6153 -31 1863 161 53 11 chr10 71290714 71291069 -69025696 + L1MB7 LINE L1 5814 6183 -1 328 304 18 27 chr10 71292038 71292150 -69024615 - L3 LINE CR1 -187 1390 1280 2180 116 0 0 chr10 71292792 71293122 -69023643 + AluSx SINE Alu 1 330 0 969 138 8 0 chr10 71293138 71293268 -69023497 - FLAM_C SINE Alu -2 131 1 2151 98 0 20 chr10 71293350 71293647 -69023118 - AluSx SINE Alu -6 306 16 453 167 0 0 chr10 71293747 71293813 -69022952 - AluJ/FLAM SINE Alu -245 67 2 2117 122 0 3 chr10 71294239 71294535 -69022230 + AluSg SINE Alu 1 295 -15 2021 76 43 36 chr10 71294920 71295222 -69021543 + AluY SINE Alu 1 304 -7 259 266 25 25 chr10 71295452 71295531 -69021234 - MIR SINE MIR -180 82 4 876 151 0 0 chr10 71297109 71297235 -69019530 - FLAM_C SINE Alu -17 126 1 258 262 163 43 chr10 71297374 71297515 -69019250 + MARNA DNA Mariner 90 247 -339 2093 100 0 7 chr10 71297993 71298262 -69018503 - AluSx SINE Alu -45 267 1 1033 191 0 0 chr10 71298286 71298454 -69018311 - AluJb SINE Alu -13 299 132 276 149 0 0 chr10 71298454 71298501 -69018264 + (TG)n Simple_repeat Simple_repeat 1 47 0 708 74 66 4 chr10 71298502 71298745 -69018020 + (TA)n Simple_repeat Simple_repeat 1 258 0 375 250 0 0 chr10 71298854 71298926 -69017839 - AluY SINE Alu -107 194 123 263 202 39 0 chr10 71298929 71299033 -69017732 + (TA)n Simple_repeat Simple_repeat 1 108 0 748 50 57 30 chr10 71299046 71299573 -69017192 + (TA)n Simple_repeat Simple_repeat 1 541 0 247 176 0 20 chr10 71299578 71299629 -69017136 - AluY SINE Alu -169 133 84 2423 77 0 6 chr10 71300549 71300860 -69015905 + AluY SINE Alu 1 309 -2 374 202 42 92 chr10 71300907 71301026 -69015739 - L2 LINE L2 0 3313 3201 286 56 0 0 chr10 71301057 71301093 -69015672 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 3036 29 3 20 chr10 71301173 71301523 -69015242 - L1PA4 LINE L1 -1 6154 5811 840 163 0 0 chr10 71301580 71301703 -69015062 + AluJo/FLAM SINE Alu 2 124 -178 207 0 0 0 chr10 71301714 71301737 -69015028 + (GA)n Simple_repeat Simple_repeat 2 24 0 1557 178 3 20 chr10 71301737 71302020 -69014745 - AluJo SINE Alu -32 280 1 943 150 0 0 chr10 71302629 71302762 -69014003 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 71302897 71302918 -69013847 + AT_rich Low_complexity Low_complexity 1 21 0 2496 90 0 0 chr10 71303219 71303531 -69013234 - AluSp SINE Alu 0 313 2 1468 180 36 22 chr10 71303715 71304016 -69012749 - AluSx SINE Alu 0 305 1 1546 158 91 7 chr10 71304794 71305079 -69011686 + AluJo SINE Alu 1 309 -3 2019 159 0 3 chr10 71305869 71306177 -69010588 + AluJb SINE Alu 1 307 -5 336 272 58 19 chr10 71307688 71307791 -69008974 - L1ME4a LINE L1 -21 6100 5994 639 162 45 0 chr10 71307794 71307905 -69008860 - FLAM_A SINE Alu -4 138 23 2146 121 3 0 chr10 71308420 71308710 -69008055 - AluJb SINE Alu -21 291 1 1616 185 0 30 chr10 71308967 71309269 -69007496 - AluJb SINE Alu -18 294 2 2373 111 0 0 chr10 71309786 71310093 -69006672 + AluSx SINE Alu 1 307 -5 262 116 23 0 chr10 71311248 71311291 -69005474 + MIR3 SINE MIR 113 156 -52 387 282 60 7 chr10 71312424 71312573 -69004192 + MIR SINE MIR 105 261 -1 22 0 0 0 chr10 71312599 71312621 -69004144 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 71312931 71312957 -69003808 + AT_rich Low_complexity Low_complexity 1 26 0 2194 113 3 0 chr10 71313284 71313575 -69003190 + AluSx SINE Alu 1 292 -20 297 275 12 12 chr10 71313938 71314018 -69002747 + L2 LINE L2 3189 3268 -4 2260 138 0 0 chr10 71314219 71314530 -69002235 - AluSx SINE Alu -1 311 1 2437 77 0 3 chr10 71314562 71314862 -69001903 - AluSg SINE Alu -11 299 1 233 363 133 19 chr10 71315060 71315316 -69001449 - L2 LINE L2 -12 3260 2976 2352 82 7 10 chr10 71315352 71315658 -69001107 + AluSg SINE Alu 1 305 -5 638 351 61 24 chr10 71315660 71316084 -69000681 - L2 LINE L2 -471 2843 2404 325 219 14 0 chr10 71316114 71316187 -69000578 + MLT1L LTR MaLR 6 79 -536 2277 128 0 3 chr10 71316188 71316501 -69000264 + AluSq SINE Alu 1 312 -1 6262 107 51 35 chr10 71316571 71319363 -68997402 - SVA Other Other -518 1386 22 222 37 0 0 chr10 71319363 71319390 -68997375 + (AGGGGG)n Simple_repeat Simple_repeat 4 30 0 6262 107 51 35 chr10 71319390 71319409 -68997356 - SVA Other Other -1882 22 5 328 311 0 50 chr10 71319709 71319889 -68996876 + G-rich Low_complexity Low_complexity 4 174 0 228 368 7 7 chr10 71320438 71320574 -68996191 + GA-rich Low_complexity Low_complexity 2 137 0 2358 80 3 3 chr10 71320574 71320863 -68995902 - AluSc SINE Alu -20 289 1 226 271 150 15 chr10 71320866 71320999 -68995766 + MLT1L LTR MaLR 132 282 -333 364 197 0 0 chr10 71321021 71321092 -68995673 + MLT1I LTR MaLR 339 409 0 593 284 22 48 chr10 71321130 71321222 -68995543 + MLT1L LTR MaLR 383 476 -139 2504 64 0 32 chr10 71321222 71321533 -68995232 + AluY SINE Alu 1 301 -10 593 284 22 48 chr10 71321533 71321669 -68995096 + MLT1L LTR MaLR 476 605 -10 380 117 0 0 chr10 71321686 71321746 -68995019 + L1MB3 LINE L1 5808 5867 -316 821 122 0 0 chr10 71321750 71321857 -68994908 - AluSq/x SINE Alu -205 107 1 1007 192 0 5 chr10 71322089 71322287 -68994478 + L1MB3 LINE L1 5866 6062 -121 2246 98 7 3 chr10 71322287 71322621 -68994144 + AluSx SINE Alu 1 335 0 537 112 71 0 chr10 71322621 71322719 -68994046 + L1MB3 LINE L1 6043 6147 -36 639 242 109 40 chr10 71322810 71323177 -68993588 - LTR33A LTR ERVL 0 523 84 646 304 61 20 chr10 71323198 71323445 -68993320 - MLT1I LTR MaLR -23 386 130 1135 194 42 0 chr10 71323815 71324006 -68992759 - AluJb SINE Alu -10 302 104 974 261 106 58 chr10 71325149 71325736 -68991029 + MLT1L LTR MaLR 1 615 0 831 293 50 47 chr10 71325878 71326281 -68990484 + MLT1K LTR MaLR 173 576 -12 197 333 13 13 chr10 71326889 71326967 -68989798 + MIR SINE MIR 71 148 -114 437 340 0 14 chr10 71327920 71328067 -68988698 + MIR SINE MIR 20 164 -98 579 252 58 0 chr10 71328077 71328232 -68988533 - L2 LINE L2 -1 3312 3149 2384 115 0 0 chr10 71328250 71328562 -68988203 - AluSx SINE Alu 0 312 1 503 297 47 10 chr10 71328671 71328863 -68987902 + L2 LINE L2 2918 3116 -197 605 83 12 0 chr10 71328897 71328981 -68987784 + AluS SINE Alu 5 89 -223 226 218 0 18 chr10 71329081 71329136 -68987629 + FLAM_A SINE Alu 64 117 -16 2258 86 0 3 chr10 71329145 71329436 -68987329 - AluY SINE Alu -21 290 1 263 93 37 0 chr10 71329456 71329510 -68987255 + L1MB3 LINE L1 6127 6182 -1 357 132 132 0 chr10 71329516 71329592 -68987173 + L1MB8 LINE L1 6093 6178 0 890 141 6 68 chr10 71330280 71330457 -68986308 + L1MB5 LINE L1 6003 6168 -6 333 0 0 0 chr10 71330897 71330934 -68985831 + (TA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr10 71330957 71330978 -68985787 + AT_rich Low_complexity Low_complexity 1 21 0 2334 153 74 43 chr10 71330978 71331330 -68985435 - L1MB2 LINE L1 -2 6169 5795 2265 117 3 0 chr10 71331330 71331638 -68985127 + AluSq SINE Alu 2 310 -3 2334 153 74 43 chr10 71331638 71331796 -68984969 - L1MB2 LINE L1 -376 5795 5643 546 175 157 42 chr10 71331800 71331966 -68984799 - L1ME3 LINE L1 -75 6087 5903 2267 247 136 63 chr10 71332074 71332170 -68984595 - L1MC4 LINE L1 0 8042 7954 2591 50 0 3 chr10 71332170 71332467 -68984298 - AluY SINE Alu -15 296 1 2267 247 136 63 chr10 71332467 71332525 -68984240 - L1MC4 LINE L1 -88 7954 7902 237 33 0 0 chr10 71332525 71332555 -68984210 + (TC)n Simple_repeat Simple_repeat 1 30 0 2267 247 136 63 chr10 71332555 71333567 -68983198 - L1MC4 LINE L1 -140 7902 6790 182 227 109 55 chr10 71333923 71334033 -68982732 - L3 LINE CR1 -193 1384 1269 305 239 188 29 chr10 71334126 71334264 -68982501 + MIR SINE MIR 12 171 -91 246 320 0 30 chr10 71334696 71334796 -68981969 - MIR SINE MIR -73 135 39 230 266 147 42 chr10 71335732 71335875 -68980890 - MIR SINE MIR -91 171 14 281 282 0 0 chr10 71336711 71336782 -68979983 - MIR SINE MIR -112 150 80 200 264 167 0 chr10 71337005 71337077 -68979688 + L2 LINE L2 3230 3313 0 324 245 66 10 chr10 71337540 71337642 -68979123 - L1P1 LINE L1 -299 5822 5730 2466 84 23 0 chr10 71337649 71337948 -68978817 - AluSx SINE Alu -6 306 1 270 324 39 10 chr10 71339082 71339184 -68977581 + MIR SINE MIR 37 141 -67 198 158 53 0 chr10 71339868 71339906 -68976859 - MER5B DNA MER1_type 0 178 139 2303 199 41 99 chr10 71339907 71340315 -68976450 + LTR8 LTR ERV1 1 349 -342 1863 104 119 33 chr10 71340315 71340650 -68976115 - THE1B LTR MaLR 0 364 1 2303 199 41 99 chr10 71340650 71340975 -68975790 + LTR8 LTR ERV1 349 691 0 582 250 22 0 chr10 71340977 71341113 -68975652 - MER5B DNA MER1_type -39 139 1 863 239 81 5 chr10 71341385 71341607 -68975158 + MIR SINE MIR 8 246 -16 270 235 61 87 chr10 71341627 71341742 -68975023 + L2 LINE L2 3201 3312 -1 3022 193 36 12 chr10 71341765 71342370 -68974395 + LTR26E LTR ERV1 3 622 0 2261 120 0 13 chr10 71342543 71342859 -68973906 - AluSx SINE Alu 0 312 1 1947 156 0 31 chr10 71343785 71344105 -68972660 - AluJo SINE Alu -2 310 1 406 304 14 40 chr10 71344443 71344591 -68972174 - MER5A DNA MER1_type -39 150 7 691 191 27 53 chr10 71344604 71344792 -68971973 - MER5A DNA MER1_type 0 189 7 2088 151 0 0 chr10 71344898 71345196 -68971569 + AluJb SINE Alu 1 298 -14 682 161 0 0 chr10 71345361 71345473 -68971292 + AluSp/q SINE Alu 185 296 -17 2221 113 0 0 chr10 71345538 71345843 -68970922 - AluSx SINE Alu 0 305 1 2884 223 103 12 chr10 71345862 71345962 -68970803 + L1ME1 LINE L1 5326 5415 -751 2318 120 7 0 chr10 71345962 71346271 -68970494 - AluSx SINE Alu -1 311 1 2884 223 103 12 chr10 71346271 71346936 -68969829 + L1ME1 LINE L1 5415 6161 -5 263 270 36 0 chr10 71346994 71347105 -68969660 + L1ME4a LINE L1 6007 6121 0 2501 141 29 2 chr10 71348157 71348611 -68968154 + L1MB3 LINE L1 5708 6173 -10 196 228 158 50 chr10 71349488 71349589 -68967176 + MIR SINE MIR 81 192 -70 358 290 76 0 chr10 71350665 71350796 -68965969 + MIR SINE MIR 68 208 -54 26 0 0 0 chr10 71351664 71351690 -68965075 + GC_rich Low_complexity Low_complexity 1 26 0 1754 147 3 29 chr10 71352239 71352546 -68964219 - AluJb SINE Alu -3 309 11 342 288 98 13 chr10 71352852 71352994 -68963771 - MIR SINE MIR -92 170 16 194 319 0 152 chr10 71352994 71353159 -68963606 - MER5B DNA MER1_type 0 178 50 1716 162 20 43 chr10 71353159 71353365 -68963400 + AluJb SINE Alu 1 199 -113 3513 209 20 81 chr10 71353365 71354396 -68962369 + LTR5 LTR ERVK 1 969 0 1716 162 20 43 chr10 71354396 71354492 -68962273 + AluJb SINE Alu 199 296 -16 194 319 0 152 chr10 71354492 71354536 -68962229 - MER5B DNA MER1_type -128 50 1 470 260 75 20 chr10 71354676 71354822 -68961943 + MIR SINE MIR 93 246 -16 302 331 86 23 chr10 71354875 71355050 -68961715 - MIR3 SINE MIR -18 190 5 1948 105 11 25 chr10 71355210 71355495 -68961270 + AluSx SINE Alu 32 312 0 267 263 34 59 chr10 71355652 71355770 -68960995 - MIR SINE MIR -58 150 36 421 277 92 7 chr10 71355939 71356080 -68960685 - MIR SINE MIR -28 234 82 200 392 56 0 chr10 71356966 71357091 -68959674 - L3 LINE CR1 -28 1549 1418 1188 185 56 35 chr10 71357109 71357243 -68959522 + MER8 DNA MER2_type 1 144 -95 2235 110 32 24 chr10 71357243 71357615 -68959150 + THE1C LTR MaLR 1 375 0 1188 185 56 35 chr10 71357615 71357712 -68959053 + MER8 DNA MER2_type 144 237 -2 553 221 8 8 chr10 71357822 71357944 -68958821 + MER5B DNA MER1_type 1 122 -56 879 168 8 0 chr10 71357944 71358105 -68958660 - AluJb SINE Alu 0 312 151 2612 170 28 147 chr10 71358108 71359063 -68957702 + L1MC4a LINE L1 5875 6716 -1092 1677 158 0 40 chr10 71359074 71359372 -68957393 + AluJo SINE Alu 25 310 -2 24 32 0 0 chr10 71359417 71359448 -68957317 + AT_rich Low_complexity Low_complexity 1 31 0 2140 65 4 4 chr10 71359485 71359747 -68957018 - AluY SINE Alu -49 262 1 200 57 0 29 chr10 71359951 71359986 -68956779 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1129 160 0 0 chr10 71360004 71360173 -68956592 + AluJo SINE Alu 1 169 -143 1973 137 24 0 chr10 71360406 71360698 -68956067 + AluSx SINE Alu 12 310 -2 280 254 108 39 chr10 71360730 71360860 -68955905 + L1MC4a LINE L1 5715 5853 -1955 249 276 173 19 chr10 71361008 71361164 -68955601 + L1MC4a LINE L1 5988 6167 -1641 256 333 0 0 chr10 71361243 71361321 -68955444 + (TG)n Simple_repeat Simple_repeat 2 79 0 418 280 23 69 chr10 71361770 71361945 -68954820 - L3 LINE CR1 -98 1479 1313 626 284 40 25 chr10 71362009 71362210 -68954555 + MIR SINE MIR 56 259 -3 1146 250 100 30 chr10 71362965 71363405 -68953360 + LTR33 LTR ERVL 40 510 -11 195 286 0 39 chr10 71363639 71363716 -68953049 - MIR SINE MIR -51 211 138 208 243 220 20 chr10 71363725 71363842 -68952923 - MIR SINE MIR -62 200 62 745 214 67 75 chr10 71364385 71364730 -68952035 - L1MC5 LINE L1 -71 7890 7549 1029 240 125 55 chr10 71364733 71365245 -68951520 - MLT1H LTR MaLR 0 549 2 617 275 13 25 chr10 71365247 71365483 -68951282 - L1MC5 LINE L1 -412 7549 7317 1415 155 0 0 chr10 71365548 71365755 -68951010 - AluJo SINE Alu -100 212 6 1974 105 4 4 chr10 71365818 71366076 -68950689 - AluSx SINE Alu -16 296 39 456 296 21 26 chr10 71366078 71366267 -68950498 + L2 LINE L2 2754 2941 -373 366 250 43 101 chr10 71366298 71366506 -68950259 + L2 LINE L2 3118 3313 0 813 196 16 42 chr10 71367219 71367408 -68949357 + MER5A DNA MER1_type 4 187 -2 2082 161 0 0 chr10 71367534 71367844 -68948921 + AluJb SINE Alu 1 310 -2 358 294 49 14 chr10 71367868 71368011 -68948754 + MIR SINE MIR 71 218 -44 2313 122 0 0 chr10 71368138 71368450 -68948315 + AluSx SINE Alu 1 312 0 676 87 16 24 chr10 71368453 71368579 -68948186 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 299 242 147 11 chr10 71369400 71369495 -68947270 + MER5B DNA MER1_type 1 108 -70 2252 109 0 3 chr10 71370467 71370760 -68946005 + AluSg SINE Alu 1 292 -18 311 281 0 0 chr10 71372015 71372097 -68944668 - L1M4 LINE L1 -3123 3023 2942 203 283 100 58 chr10 71372149 71372269 -68944496 - MIR SINE MIR -112 150 26 2167 117 3 0 chr10 71372876 71373166 -68943599 - AluSx SINE Alu -1 311 21 219 182 73 0 chr10 71373627 71373682 -68943083 + MIR SINE MIR 94 152 -56 186 73 73 0 chr10 71374036 71374077 -68942688 + (CTGGGG)n Simple_repeat Simple_repeat 1 44 0 437 287 49 0 chr10 71374385 71374507 -68942258 - L3 LINE CR1 -176 1401 1274 670 319 213 9 chr10 71374637 71375088 -68941677 - L3 LINE CR1 -693 884 342 22 35 0 0 chr10 71375227 71375256 -68941509 + AT_rich Low_complexity Low_complexity 1 29 0 4799 160 21 54 chr10 71375266 71375456 -68941309 - L1MA7 LINE L1 0 6291 6096 2064 126 18 0 chr10 71375456 71375742 -68941023 - AluSx SINE Alu -17 295 5 2084 137 0 3 chr10 71375752 71376060 -68940705 - AluSx SINE Alu 0 307 1 4799 160 21 54 chr10 71376060 71376911 -68939854 - L1MA7 LINE L1 -204 6087 5273 2202 110 0 0 chr10 71377021 71377325 -68939440 + AluSg SINE Alu 1 304 0 660 264 24 51 chr10 71377596 71377850 -68938915 + LTR16C LTR ERVL 243 489 -2 456 291 43 35 chr10 71377908 71378162 -68938603 - L1ME4a LINE L1 -181 5940 5685 385 300 127 55 chr10 71378212 71378449 -68938316 - L3 LINE CR1 -1277 300 47 358 279 7 29 chr10 71378940 71379076 -68937689 - MIR SINE MIR -67 195 63 189 0 0 0 chr10 71379432 71379453 -68937312 + (TG)n Simple_repeat Simple_repeat 2 22 0 270 56 0 0 chr10 71379503 71379539 -68937226 + (TC)n Simple_repeat Simple_repeat 1 36 0 295 76 0 61 chr10 71379594 71379660 -68937105 + (TCTCTG)n Simple_repeat Simple_repeat 2 63 0 225 152 43 0 chr10 71379703 71379749 -68937016 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 201 74 0 0 chr10 71379749 71379776 -68936989 + (CA)n Simple_repeat Simple_repeat 1 27 0 228 229 288 46 chr10 71380661 71380814 -68935951 + MIR SINE MIR 61 250 -12 190 217 0 43 chr10 71380784 71380830 -68935935 + L2 LINE L2 3266 3309 -4 * 4424 62 28 13 chr10 71380915 71381515 -68935250 + L1MA1 LINE L1 5682 6290 -12 220 304 81 34 chr10 71381692 71381840 -68934925 - L3 LINE CR1 -10 1567 1413 665 224 20 33 chr10 71381923 71382075 -68934690 + MIR SINE MIR 109 258 -4 714 181 137 22 chr10 71382220 71382402 -68934363 + MIR SINE MIR 60 262 0 2258 108 7 7 chr10 71382417 71382723 -68934042 - AluSx SINE Alu -6 306 1 530 217 35 55 chr10 71382984 71383072 -68933693 + MIR SINE MIR 22 110 -129 2646 113 3 3 chr10 71383072 71383436 -68933329 + THE1B LTR MaLR 1 364 0 530 217 35 55 chr10 71383436 71383526 -68933239 + MIR SINE MIR 110 200 -39 1444 190 48 27 chr10 71383630 71383792 -68932973 + MLT1B LTR MaLR 1 158 -232 1901 161 0 43 chr10 71383792 71384116 -68932649 + AluJb SINE Alu 1 310 -2 1444 190 48 27 chr10 71384116 71384290 -68932475 + MLT1B LTR MaLR 158 344 -46 1821 103 57 7 chr10 71384317 71384614 -68932151 + MER1B DNA MER1_type 8 331 -8 321 51 0 0 chr10 71384618 71384657 -68932108 + MLT1B LTR MaLR 348 386 -4 260 267 124 57 chr10 71384818 71384923 -68931842 - MIR SINE MIR -61 147 36 269 234 15 124 chr10 71385432 71385448 -68931317 - Charlie8 DNA MER1_type -194 147 131 2209 117 0 0 chr10 71385448 71385752 -68931013 - AluSx SINE Alu 0 304 1 269 234 15 124 chr10 71385752 71385871 -68930894 - Charlie8 DNA MER1_type -210 131 26 497 162 9 213 chr10 71385913 71386129 -68930636 - MER5B DNA MER1_type -6 172 1 246 62 0 0 chr10 71386203 71386235 -68930530 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 207 210 210 10 chr10 71386414 71386514 -68930251 + L2 LINE L2 2844 2963 -351 441 183 149 10 chr10 71386601 71386731 -68930034 + MER5B DNA MER1_type 1 128 -50 269 128 0 0 chr10 71386739 71386778 -68929987 + Alu SINE Alu 248 286 -16 1786 130 0 8 chr10 71386782 71387028 -68929737 - AluSx SINE Alu -68 244 1 320 215 31 0 chr10 71387028 71387093 -68929672 + MER5B DNA MER1_type 112 178 0 996 204 45 88 chr10 71387156 71387185 -68929580 - MLT1A2 LTR MaLR -34 340 311 2106 98 3 47 chr10 71387185 71387482 -68929283 - AluY SINE Alu -14 297 14 996 204 45 88 chr10 71387482 71387804 -68928961 - MLT1A2 LTR MaLR -63 311 4 255 330 31 21 chr10 71388610 71388707 -68928058 + MIR SINE MIR 18 115 -93 1830 163 21 3 chr10 71389138 71389427 -68927338 + AluJo SINE Alu 1 294 -18 446 292 58 0 chr10 71389481 71389635 -68927130 + MIR SINE MIR 76 238 -24 492 228 44 15 chr10 71389876 71390012 -68926753 + LTR37B LTR ERV1 119 258 -210 458 199 163 92 chr10 71390022 71390096 -68926669 - MER5A DNA MER1_type -30 159 92 2476 90 3 0 chr10 71390096 71390406 -68926359 - AluSq SINE Alu -2 311 1 458 199 163 92 chr10 71390406 71390472 -68926293 - MER5A DNA MER1_type -97 92 9 1015 300 104 17 chr10 71390892 71391486 -68925279 - L2 LINE L2 0 3313 2667 237 311 78 0 chr10 71391486 71391589 -68925176 - MER5B DNA MER1_type -37 141 31 246 181 28 97 chr10 71392191 71392263 -68924502 - MIR SINE MIR -89 173 107 2244 119 3 3 chr10 71392499 71392809 -68923956 + AluSx SINE Alu 1 310 -2 1196 179 102 81 chr10 71393231 71393684 -68923081 + MER110A LTR ERV1 23 477 -14 425 281 26 0 chr10 71393836 71393950 -68922815 - MIR3 SINE MIR -18 190 74 366 227 34 0 chr10 71393947 71394035 -68922730 + MIR SINE MIR 167 257 -5 * 2342 113 3 0 chr10 71394049 71394359 -68922406 + AluSx SINE Alu 1 311 -1 2108 111 14 0 chr10 71394365 71394669 -68922096 + AluSq SINE Alu 1 308 0 859 208 45 0 chr10 71394768 71394946 -68921819 - MER5A DNA MER1_type 0 189 4 652 178 130 11 chr10 71395721 71395882 -68920883 - MER5A DNA MER1_type -3 186 4 405 254 24 48 chr10 71395892 71396018 -68920747 - MER91A DNA MER1_type -17 179 57 417 174 228 0 chr10 71396547 71396639 -68920126 - MER81 DNA DNA 0 114 2 2355 156 42 77 chr10 71398035 71398331 -68918434 + L1MB4 LINE L1 5589 5857 -323 2210 107 0 7 chr10 71398331 71398629 -68918136 + AluSg1 SINE Alu 1 296 -13 2355 156 42 77 chr10 71398629 71398904 -68917861 + L1MB4 LINE L1 5857 6140 -40 2237 135 3 0 chr10 71399058 71399369 -68917396 - AluJb SINE Alu 0 312 1 183 80 0 0 chr10 71399436 71399461 -68917304 + (A)n Simple_repeat Simple_repeat 1 25 0 637 235 73 40 chr10 71400493 71400559 -68916206 + MER112 DNA MER1_type 2 64 -192 468 0 0 0 chr10 71400559 71400611 -68916154 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 637 235 73 40 chr10 71400611 71400791 -68915974 + MER112 DNA MER1_type 64 256 0 223 225 53 133 chr10 71402439 71402590 -68914175 - MIR3 SINE MIR -62 146 8 198 301 12 60 chr10 71403084 71403167 -68913598 - L3 LINE CR1 -30 1547 1469 467 285 116 83 chr10 71403179 71404254 -68912511 - L1 LINE L1 -2648 3498 2350 2547 75 0 0 chr10 71404865 71405170 -68911595 - AluSg1 SINE Alu 0 309 5 695 184 32 0 chr10 71405186 71405311 -68911454 - FLAM_C SINE Alu -2 131 3 237 108 0 0 chr10 71405324 71405361 -68911404 + (TCC)n Simple_repeat Simple_repeat 3 39 0 1438 237 68 6 chr10 71406426 71406904 -68909861 - L1ME1 LINE L1 -16 6168 5649 1658 153 7 18 chr10 71406908 71407189 -68909576 - AluJo SINE Alu 0 312 35 266 163 20 0 chr10 71407236 71407285 -68909480 - L1ME1 LINE L1 -503 5663 5614 1149 180 30 6 chr10 71407285 71407575 -68909190 + MER2 DNA MER2_type 1 344 -1 371 213 19 138 chr10 71407577 71407815 -68908950 - L1ME1 LINE L1 -550 5616 5351 2251 95 3 3 chr10 71407815 71408129 -68908636 - AluSq SINE Alu 0 314 1 371 213 19 138 chr10 71408129 71408171 -68908594 - L1ME1 LINE L1 -815 5351 5377 2367 72 3 25 chr10 71408171 71408489 -68908276 - AluY SINE Alu 0 311 1 371 213 19 138 chr10 71408489 71408563 -68908202 - L1ME1 LINE L1 -788 5378 5297 2494 182 133 36 chr10 71408896 71409798 -68906967 + L1M4 LINE L1 4589 5589 -595 1537 87 0 0 chr10 71409799 71409984 -68906781 + AluSc SINE Alu 1 185 -124 2145 142 30 91 chr10 71411005 71411478 -68905287 + LTR8 LTR ERV1 246 689 -2 405 213 48 27 chr10 71411481 71411609 -68905156 - MLT1E LTR MaLR -462 131 1 715 67 0 19 chr10 71411625 71411730 -68905035 - AluY SINE Alu -2 309 207 1006 104 0 0 chr10 71411772 71411897 -68904868 + AluSq/x SINE Alu 9 133 -180 201 108 0 0 chr10 71411958 71411995 -68904770 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 561 326 112 10 chr10 71412093 71412476 -68904289 - L2 LINE L2 -778 2536 2115 429 154 0 0 chr10 71412522 71412587 -68904178 + AluJ/FLAM SINE Alu 2 66 -246 300 85 85 0 chr10 71412587 71412646 -68904119 - LTR61 LTR ERV1 0 595 532 252 214 0 18 chr10 71412664 71412720 -68904045 + FLAM SINE Alu 63 117 -16 616 246 9 23 chr10 71412745 71412960 -68903805 - AluSg/x SINE Alu -10 302 91 286 233 123 0 chr10 71413866 71413939 -68902826 - MER94 DNA DNA -52 82 1 188 371 56 11 chr10 71414140 71414229 -68902536 + MIR SINE MIR 119 211 -51 1952 146 26 7 chr10 71414290 71414592 -68902173 - AluJb SINE Alu -4 308 1 1942 156 63 81 chr10 71414592 71415150 -68901615 + L1MB8 LINE L1 5628 6175 -3 809 150 21 14 chr10 71415639 71415779 -68900986 + MLT1A2 LTR MaLR 1 141 -233 366 330 115 11 chr10 71418143 71418334 -68898431 + MIR SINE MIR 41 251 -11 1145 113 0 25 chr10 71418493 71418653 -68898112 - AluSx SINE Alu -156 156 1 347 216 294 7 chr10 71418654 71418807 -68897958 - MLT1E LTR MaLR -51 573 377 781 192 172 39 chr10 71418809 71419012 -68897753 - MLT1E LTR MaLR -363 230 1 263 302 19 0 chr10 71419020 71419126 -68897639 - L2 LINE L2 -311 2961 2854 214 261 0 33 chr10 71420301 71420371 -68896394 - MIR SINE MIR -111 97 29 358 281 98 30 chr10 71420437 71420601 -68896164 + MIR SINE MIR 88 262 0 510 244 26 30 chr10 71420695 71420901 -68895864 + MIR SINE MIR 16 212 -50 189 333 94 38 chr10 71420966 71421125 -68895640 + L3b LINE CR1 1260 1427 -156 836 98 0 8 chr10 71421161 71421283 -68895482 - AluSg/x SINE Alu -17 293 173 538 68 0 0 chr10 71421577 71421650 -68895115 + AluSp/q SINE Alu 229 301 -12 2238 120 0 0 chr10 71421726 71422025 -68894740 - AluSq SINE Alu -14 299 1 199 245 43 137 chr10 71422025 71422122 -68894643 - MER5B DNA MER1_type -50 128 46 256 287 35 11 chr10 71422033 71422120 -68894645 + MER5A DNA MER1_type 70 158 -31 1787 130 31 48 chr10 71422122 71422414 -68894351 - AluSx SINE Alu -12 300 14 199 245 43 137 chr10 71422414 71422455 -68894310 - MER5B DNA MER1_type -132 46 3 2482 73 0 3 chr10 71423026 71423042 -68893723 - AluY SINE Alu -9 302 287 198 0 0 0 chr10 71423042 71423064 -68893701 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2482 73 0 3 chr10 71423064 71423350 -68893415 - AluY SINE Alu -24 287 1 283 191 315 62 chr10 71423378 71423556 -68893209 - MIR SINE MIR 0 262 40 394 323 31 57 chr10 71424114 71424317 -68892448 + MIR SINE MIR 15 213 -49 225 65 0 0 chr10 71424317 71424348 -68892417 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 394 323 31 57 chr10 71424348 71424373 -68892392 + MIR SINE MIR 213 237 -25 335 279 117 9 chr10 71424565 71424676 -68892089 + L2 LINE L2 3149 3271 -1 1814 138 4 7 chr10 71424859 71425128 -68891637 - AluSx SINE Alu -4 308 41 221 305 18 22 chr10 71425154 71425309 -68891456 + CT-rich Low_complexity Low_complexity 1 154 0 1578 178 87 3 chr10 71425762 71426049 -68890716 + AluJb SINE Alu 1 311 -1 317 325 74 67 chr10 71426519 71426817 -68889948 + L2 LINE L2 2944 3243 -29 305 279 83 87 chr10 71426817 71426910 -68889855 + MER102b DNA MER1_type 3 95 -1333 1540 189 3 42 chr10 71426910 71427032 -68889733 + AluJo SINE Alu 13 138 -174 1577 118 4 13 chr10 71427032 71427261 -68889504 + AluSg/x SINE Alu 84 310 0 1540 189 3 42 chr10 71427261 71427450 -68889315 + AluJo SINE Alu 138 312 0 305 279 83 87 chr10 71427450 71427668 -68889097 + MER102b DNA MER1_type 95 313 -28 2105 127 6 13 chr10 71427685 71427999 -68888766 - AluSx SINE Alu 0 312 1 510 267 33 13 chr10 71428145 71428295 -68888470 - MIR SINE MIR -42 220 68 383 248 82 99 chr10 71428385 71428492 -68888273 + L2 LINE L2 3037 3144 -169 2465 96 0 0 chr10 71428492 71428804 -68887961 + AluSq SINE Alu 1 312 -1 383 248 82 99 chr10 71428804 71428978 -68887787 + L2 LINE L2 3144 3313 0 1449 108 0 15 chr10 71429832 71430035 -68886730 - AluSq SINE Alu -113 200 1 2440 110 0 0 chr10 71430805 71431114 -68885651 + AluSq SINE Alu 1 309 -4 24 53 0 0 chr10 71431321 71431359 -68885406 + AT_rich Low_complexity Low_complexity 1 38 0 2290 113 3 0 chr10 71431676 71431985 -68884780 + AluSx SINE Alu 1 310 -2 2337 118 0 0 chr10 71432212 71432517 -68884248 + AluSx SINE Alu 1 305 -7 202 267 60 35 chr10 71433259 71433375 -68883390 + L2 LINE L2 2933 3051 -221 779 310 29 4 chr10 71433623 71433865 -68882900 - MIR SINE MIR -1 261 14 1910 141 17 20 chr10 71434416 71434713 -68882052 - AluJb SINE Alu 0 312 17 2188 133 3 0 chr10 71434717 71435018 -68881747 - AluSx SINE Alu -10 302 1 1859 147 62 7 chr10 71435968 71436260 -68880505 - AluJb SINE Alu -4 308 1 322 246 38 72 chr10 71436422 71436638 -68880127 + HAL1b LINE L1 798 2394 -113 383 238 64 64 chr10 71437350 71437522 -68879243 - MLT1L LTR MaLR -262 353 182 317 192 0 14 chr10 71437588 71437661 -68879104 - MLT1L LTR MaLR -543 72 1 230 286 67 34 chr10 71437670 71437848 -68878917 + HAL1 LINE L1 2121 2304 -203 1030 181 141 0 chr10 71437849 71438048 -68878717 + AluJb SINE Alu 1 227 -85 306 271 17 25 chr10 71438054 71438172 -68878593 + HAL1 LINE L1 2364 2480 -27 27 29 0 0 chr10 71438184 71438218 -68878547 + AT_rich Low_complexity Low_complexity 1 34 0 1338 170 7 14 chr10 71438259 71438541 -68878224 + L1MB3 LINE L1 5887 6166 -17 2196 91 3 45 chr10 71439000 71439309 -68877456 - AluSc SINE Alu -13 296 1 1788 162 36 0 chr10 71439340 71439699 -68877066 - L1MB3 LINE L1 0 6183 5812 1548 210 13 26 chr10 71439710 71440015 -68876750 - AluJo SINE Alu -11 301 1 2221 124 0 3 chr10 71440080 71440379 -68876386 + AluSq SINE Alu 1 298 -15 806 243 37 14 chr10 71440441 71440655 -68876110 - MIR SINE MIR -21 241 23 307 340 0 10 chr10 71441216 71441319 -68875446 + MIR SINE MIR 22 123 -139 238 371 88 0 chr10 71441409 71441579 -68875186 - MIR SINE MIR -55 207 23 339 319 59 0 chr10 71441945 71442080 -68874685 + L2 LINE L2 2942 3084 -188 293 125 0 0 chr10 71442132 71442180 -68874585 + MIR SINE MIR 104 151 -111 203 294 15 0 chr10 71442556 71442624 -68874141 - MIR3 SINE MIR -53 155 87 270 274 81 75 chr10 71443094 71443249 -68873516 - L1ME4a LINE L1 0 6121 5963 228 67 0 0 chr10 71443249 71443279 -68873486 + (TG)n Simple_repeat Simple_repeat 1 30 0 270 274 81 75 chr10 71443279 71443309 -68873456 - L1ME4a LINE L1 -158 5963 5935 830 161 0 8 chr10 71443452 71443582 -68873183 + FLAM_C SINE Alu 1 129 -14 529 195 42 0 chr10 71443635 71443753 -68873012 - L1ME3A LINE L1 -198 5972 5850 282 145 144 20 chr10 71444886 71444954 -68871811 - MIR SINE MIR -62 146 94 289 343 89 6 chr10 71445064 71445233 -68871532 + MIR SINE MIR 48 230 -32 363 207 17 39 chr10 71445417 71445596 -68871169 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 270 309 54 42 chr10 71447243 71447411 -68869354 + MIR SINE MIR 19 188 -74 365 213 87 31 chr10 71447786 71447913 -68868852 + MER112 DNA MER1_type 9 142 -118 2042 90 0 23 chr10 71447941 71448207 -68868558 - AluSq SINE Alu -53 260 1 278 286 57 51 chr10 71450367 71450542 -68866223 + MIR SINE MIR 33 208 -54 191 260 0 0 chr10 71450642 71450692 -68866073 - MIR SINE MIR -134 128 79 758 217 36 0 chr10 71450699 71450865 -68865900 + MER45C DNA AcHobo 1 172 -781 806 296 118 31 chr10 71450915 71451297 -68865468 + MER45C DNA AcHobo 281 695 -258 955 199 168 21 chr10 71451432 71451718 -68865047 + MER45B DNA AcHobo 713 1040 0 339 25 0 0 chr10 71451848 71451888 -68864877 + (CA)n Simple_repeat Simple_repeat 2 41 0 2269 51 4 26 chr10 71452235 71452508 -68864257 - AluY SINE Alu -44 267 1 2079 140 3 16 chr10 71452547 71452861 -68863904 + AluSq SINE Alu 1 310 -3 231 185 278 93 chr10 71453394 71453545 -68863220 + MIR SINE MIR 84 262 0 292 109 62 62 chr10 71453550 71453614 -68863151 - AluY SINE Alu -6 294 247 278 286 57 51 chr10 71456613 71456788 -68859977 + MIR SINE MIR 33 208 -54 191 260 0 0 chr10 71456888 71456938 -68859827 - MIR SINE MIR -134 128 79 758 217 36 0 chr10 71456945 71457111 -68859654 + MER45C DNA AcHobo 1 172 -781 806 296 118 31 chr10 71457161 71457543 -68859222 + MER45C DNA AcHobo 281 695 -258 955 199 168 21 chr10 71457678 71457964 -68858801 + MER45B DNA AcHobo 713 1040 0 339 25 0 0 chr10 71458094 71458134 -68858631 + (CA)n Simple_repeat Simple_repeat 2 41 0 2344 40 0 26 chr10 71458481 71458754 -68858011 - AluY SINE Alu -44 267 2 810 117 29 0 chr10 71458950 71459087 -68857678 + MLT2B2 LTR ERVL 1 141 -374 2053 123 3 23 chr10 71459089 71459391 -68857374 + AluSx SINE Alu 1 296 -16 231 185 278 93 chr10 71459396 71459547 -68857218 - MIR SINE MIR 0 262 84 2279 115 3 13 chr10 71460080 71460393 -68856372 - AluSq SINE Alu -3 310 1 1928 135 0 4 chr10 71460883 71461149 -68855616 + AluSx SINE Alu 9 273 -39 289 309 48 8 chr10 71461332 71461458 -68855307 - L2 LINE L2 -1 3271 3141 2495 241 73 26 chr10 71461562 71461792 -68854973 - L1M4 LINE L1 -1985 4161 3943 2285 99 3 13 chr10 71461792 71462105 -68854660 - AluSx SINE Alu -2 310 1 2495 241 73 26 chr10 71462105 71462650 -68854115 - L1M4 LINE L1 -2203 3943 3349 237 329 81 12 chr10 71463180 71463341 -68853424 + MIR3 SINE MIR 21 192 -16 282 315 89 7 chr10 71463443 71463589 -68853176 - MIR SINE MIR -1 261 104 1963 148 7 3 chr10 71464602 71464892 -68851873 + AluJb SINE Alu 1 291 -21 188 103 0 0 chr10 71464912 71464941 -68851824 + MIR SINE MIR 78 106 -102 2216 123 0 0 chr10 71466108 71466409 -68850356 + AluSx SINE Alu 1 301 -11 2735 166 60 4 chr10 71468515 71469044 -68847721 + MER89 LTR ERV1 1 559 0 1014 177 1 127 chr10 71470682 71470876 -68845889 - L1MC4 LINE L1 -369 5809 5701 2278 100 0 0 chr10 71470876 71471200 -68845565 - AluSx SINE Alu 0 325 2 1014 177 1 127 chr10 71471200 71471326 -68845439 - L1MC4 LINE L1 -477 5701 5561 2297 122 3 0 chr10 71472079 71472383 -68844382 + AluSx SINE Alu 1 305 -7 2510 170 58 79 chr10 71473441 71473725 -68843040 + L1MB8 LINE L1 5561 5849 -329 2026 139 0 35 chr10 71473725 71474035 -68842730 + AluSx SINE Alu 1 299 -13 2510 170 58 79 chr10 71474035 71474256 -68842509 + L1MB8 LINE L1 5849 6053 -125 2130 112 7 36 chr10 71474256 71474561 -68842204 + AluSx SINE Alu 1 296 -16 2510 170 58 79 chr10 71474561 71474676 -68842089 + L1MB8 LINE L1 6053 6169 -9 24 53 0 0 chr10 71474677 71474715 -68842050 + AT_rich Low_complexity Low_complexity 1 38 0 369 263 30 53 chr10 71474783 71474916 -68841849 + MIR SINE MIR 99 228 -34 189 244 0 0 chr10 71475139 71475184 -68841581 + L2 LINE L2 2894 2938 -334 314 274 151 0 chr10 71475194 71475300 -68841465 + L1M4 LINE L1 4302 4423 -1723 342 171 29 14 chr10 71475341 71475411 -68841354 + L2 LINE L2 3007 3077 -195 728 341 111 50 chr10 71476053 71476156 -68840609 + L1M4 LINE L1 4027 4122 -2024 1775 163 22 26 chr10 71476156 71476469 -68840296 + AluJo SINE Alu 1 312 0 728 341 111 50 chr10 71476469 71476798 -68839967 + L1M4 LINE L1 4122 4430 -1716 2161 146 0 0 chr10 71476798 71477106 -68839659 - AluJb SINE Alu -4 308 1 728 341 111 50 chr10 71477106 71477628 -68839137 + L1M4 LINE L1 4430 5040 -1106 317 259 71 108 chr10 71478009 71478105 -68838660 - L1MC4 LINE L1 -2341 5467 5369 1420 173 87 7 chr10 71478105 71478219 -68838546 + AluJo SINE Alu 1 105 -207 1737 139 87 21 chr10 71478219 71478506 -68838259 + AluSx SINE Alu 1 306 -6 1420 173 87 7 chr10 71478506 71478668 -68838097 + AluJo SINE Alu 105 299 -13 317 259 71 108 chr10 71478668 71478783 -68837982 - L1MC4 LINE L1 -2439 5369 5264 335 275 188 22 chr10 71478855 71478993 -68837772 + L1ME4a LINE L1 5883 6043 -78 1800 159 0 0 chr10 71479136 71479400 -68837365 - AluSx SINE Alu -23 289 26 2328 95 3 13 chr10 71479777 71480082 -68836683 + AluSx SINE Alu 2 303 -9 211 226 38 0 chr10 71480210 71480263 -68836502 - L2 LINE L2 -1 3312 3258 315 274 123 20 chr10 71480732 71480878 -68835887 - MIR SINE MIR -100 162 2 2384 107 0 0 chr10 71481535 71481844 -68834921 + AluSx SINE Alu 1 309 -3 418 257 169 0 chr10 71481845 71481993 -68834772 - MIR SINE MIR -4 258 86 414 248 17 43 chr10 71482046 71482163 -68834602 - MER81 DNA DNA 0 114 1 300 305 40 33 chr10 71483128 71483143 -68833622 - MER5B DNA MER1_type -26 152 139 2057 146 17 0 chr10 71483143 71483445 -68833320 + AluJb SINE Alu 1 307 -5 300 305 40 33 chr10 71483445 71483580 -68833185 - MER5B DNA MER1_type -39 139 1 240 306 177 16 chr10 71483587 71483773 -68832992 - L3 LINE CR1 -52 1525 1310 1400 191 45 48 chr10 71484680 71485016 -68831749 + L1MC1 LINE L1 5998 6332 -1 894 133 48 24 chr10 71485011 71485176 -68831589 - L1MB2 LINE L1 -31 6140 5972 * 479 313 17 22 chr10 71485336 71485515 -68831250 - MIR SINE MIR -6 256 79 383 206 23 154 chr10 71485539 71485654 -68831111 - MIR SINE MIR 0 262 176 2035 85 0 0 chr10 71485654 71485900 -68830865 - AluSx SINE Alu -9 303 58 383 206 23 154 chr10 71485900 71485959 -68830806 - MIR SINE MIR -86 176 111 230 234 210 24 chr10 71486230 71486354 -68830411 + MIR3 SINE MIR 61 207 -1 * 598 272 0 12 chr10 71486342 71486504 -68830261 - MER5B DNA MER1_type -4 174 15 204 206 315 0 chr10 71486570 71486643 -68830122 - MER5A DNA MER1_type -80 109 14 679 169 20 34 chr10 71486666 71486814 -68829951 + MER5A DNA MER1_type 1 146 -43 537 269 47 0 chr10 71487107 71487278 -68829487 + MIR3 SINE MIR 30 208 0 248 270 45 11 chr10 71487498 71487587 -68829178 - HAL1 LINE L1 -47 2460 2369 322 188 62 62 chr10 71488348 71488444 -68828321 + MIR SINE MIR 54 149 -113 1932 154 0 44 chr10 71488471 71488790 -68827975 + AluJb SINE Alu 3 307 -5 2249 97 0 0 chr10 71488811 71489133 -68827632 + AluSg SINE Alu 2 323 0 2369 180 12 6 chr10 71489133 71489616 -68827149 + L1MB7 LINE L1 5684 6169 -15 293 286 67 0 chr10 71489616 71489721 -68827044 + MIR SINE MIR 138 249 -13 322 270 60 0 chr10 71490204 71490304 -68826461 - MIR SINE MIR -92 170 65 234 256 200 11 chr10 71490344 71490434 -68826331 + MIR SINE MIR 35 141 -67 1072 172 28 6 chr10 71491515 71491695 -68825070 + AluJo SINE Alu 1 184 -128 932 152 13 13 chr10 71492356 71492507 -68824258 + FRAM SINE Alu 12 162 -14 186 43 0 0 chr10 71492507 71492530 -68824235 + (GA)n Simple_repeat Simple_repeat 2 24 0 185 370 8 59 chr10 71492538 71492657 -68824108 + MIR SINE MIR 32 144 -64 698 280 112 31 chr10 71492697 71492983 -68823782 - L2 LINE L2 0 3313 3005 2216 106 10 7 chr10 71493348 71493641 -68823124 + AluSx SINE Alu 1 294 -18 369 299 105 18 chr10 71493642 71493918 -68822847 - L2 LINE L2 -246 3026 2729 445 122 14 0 chr10 71494172 71494246 -68822519 + MER20 DNA MER1_type 16 90 -129 986 136 7 0 chr10 71494268 71494422 -68822343 + MLT1A1 LTR MaLR 1 155 -210 1249 161 100 35 chr10 71494450 71494680 -68822085 + AluJo SINE Alu 19 263 -49 240 35 0 0 chr10 71494694 71494723 -68822042 + (GGGGA)n Simple_repeat Simple_repeat 3 31 0 215 122 0 24 chr10 71494746 71494787 -68821978 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 853 187 12 23 chr10 71494787 71494958 -68821807 + MLT1A1 LTR MaLR 146 314 -51 578 184 18 0 chr10 71494991 71495105 -68821660 + MER20 DNA MER1_type 98 213 -6 313 314 19 69 chr10 71496411 71496497 -68820268 - MER5A DNA MER1_type 0 189 113 2552 69 0 0 chr10 71496497 71496800 -68819965 - AluSg SINE Alu -6 304 2 313 314 19 69 chr10 71496800 71496872 -68819893 - MER5A DNA MER1_type -76 113 39 504 196 9 0 chr10 71496872 71496984 -68819781 + L1ME3 LINE L1 5050 5162 -984 884 166 14 0 chr10 71496989 71497128 -68819637 + FAM SINE Alu 1 141 -44 1563 259 62 19 chr10 71497378 71497907 -68818858 + L1ME3 LINE L1 5611 6162 0 1707 173 0 21 chr10 71498120 71498453 -68818312 - AluJb SINE Alu 0 327 1 180 250 243 27 chr10 71498920 71499068 -68817697 - L2 LINE L2 -213 3100 2921 387 251 61 77 chr10 71499107 71499354 -68817411 - L1ME LINE L1 -413 5708 5466 200 209 23 0 chr10 71499710 71499753 -68817012 + MIR SINE MIR 102 145 -63 1050 317 158 9 chr10 71499779 71500578 -68816187 - L2 LINE L2 -8 3305 2375 851 219 0 0 chr10 71500899 71501045 -68815720 + FRAM SINE Alu 8 153 -23 309 0 23 0 chr10 71501304 71501347 -68815418 - L1MB7 LINE L1 -19 6165 6122 390 174 0 76 chr10 71501348 71501421 -68815344 - Tigger5 DNA MER2_type 0 2323 2257 2383 101 7 0 chr10 71501421 71501727 -68815038 + AluSx SINE Alu 1 308 -4 390 174 0 76 chr10 71501727 71501745 -68815020 - Tigger5 DNA MER2_type -66 2257 2239 348 183 42 14 chr10 71501758 71501829 -68814936 + Tigger5 DNA MER2_type 1 73 -2250 286 197 15 15 chr10 71501846 71501912 -68814853 - Tigger5 DNA MER2_type -7 2316 2251 * 360 146 0 0 chr10 71501881 71501936 -68814829 - Tigger5 DNA MER2_type -2268 55 1 447 155 60 0 chr10 71501936 71502020 -68814745 - L1MB7 LINE L1 -62 6122 6034 * 3033 147 19 25 chr10 71502011 71502574 -68814191 + L1MB5 LINE L1 5590 6149 -25 2333 77 31 0 chr10 71502931 71503217 -68813548 + AluY SINE Alu 1 295 -16 1213 173 51 9 chr10 71503724 71503938 -68812827 + AluJb SINE Alu 66 288 -24 204 37 0 0 chr10 71503938 71503953 -68812812 + (GA)n Simple_repeat Simple_repeat 1 18 -9 2320 102 0 0 chr10 71503953 71504246 -68812519 + AluSx SINE Alu 1 293 -19 204 37 0 0 chr10 71504246 71504257 -68812508 + (GA)n Simple_repeat Simple_repeat 17 27 0 1045 147 139 27 chr10 71504259 71504517 -68812248 + L1MB8 LINE L1 5888 6174 -4 1888 146 20 17 chr10 71505757 71506059 -68810706 + AluJb SINE Alu 1 303 -9 1084 259 39 18 chr10 71506062 71506452 -68810313 + L1ME1 LINE L1 5765 6162 -4 887 170 22 0 chr10 71506499 71506681 -68810084 + L1MB5 LINE L1 5989 6174 0 2618 63 0 0 chr10 71506745 71507047 -68809718 + AluY SINE Alu 1 302 -9 209 324 0 14 chr10 71507452 71507523 -68809242 + MER5A DNA MER1_type 5 74 -115 2101 112 3 41 chr10 71507524 71507838 -68808927 + AluSx SINE Alu 1 302 -10 1927 125 57 7 chr10 71507872 71507990 -68808775 + AluSq SINE Alu 1 112 -201 2536 78 0 0 chr10 71507990 71508296 -68808469 + AluY SINE Alu 1 306 -5 1927 125 57 7 chr10 71508296 71508474 -68808291 + AluSq SINE Alu 112 312 -1 28 0 0 0 chr10 71508474 71508502 -68808263 + AT_rich Low_complexity Low_complexity 1 28 0 2537 58 0 0 chr10 71508502 71508797 -68807968 + AluY SINE Alu 1 295 -16 2171 131 0 0 chr10 71508809 71509100 -68807665 + AluSx SINE Alu 1 291 -21 2143 129 0 0 chr10 71509103 71509397 -68807368 + AluSx SINE Alu 1 294 -18 2568 59 0 3 chr10 71509397 71509700 -68807065 + AluY SINE Alu 1 302 -9 259 195 0 98 chr10 71509733 71509815 -68806950 - MIR SINE MIR 0 262 189 21 0 0 0 chr10 71510018 71510039 -68806726 + AT_rich Low_complexity Low_complexity 1 21 0 1026 128 51 6 chr10 71510161 71510317 -68806448 + FRAM SINE Alu 2 164 -12 974 213 33 53 chr10 71510317 71510618 -68806147 + L1ME1 LINE L1 5756 6050 -116 2513 84 0 3 chr10 71510619 71510929 -68805836 - AluSg SINE Alu -1 309 1 1015 164 10 53 chr10 71510930 71511137 -68805628 - LTR8 LTR ERV1 -493 198 1 2334 116 0 0 chr10 71511185 71511488 -68805277 - AluSx SINE Alu -9 303 1 288 0 0 0 chr10 71511494 71511526 -68805239 + (TA)n Simple_repeat Simple_repeat 2 33 0 2282 123 0 0 chr10 71511527 71511828 -68804937 - AluSx SINE Alu -11 301 1 569 147 70 19 chr10 71511837 71511975 -68804790 - MER113 DNA MER1_type? -310 211 66 639 269 66 15 chr10 71511975 71512172 -68804593 + MER63A DNA MER1_type 4 210 0 282 226 0 0 chr10 71512172 71512234 -68804531 - MER113 DNA MER1_type? -454 67 6 344 129 0 43 chr10 71512601 71512631 -68804134 + (TCCC)n Simple_repeat Simple_repeat 4 34 -36 2326 98 0 0 chr10 71512631 71512938 -68803827 - AluSq SINE Alu -6 307 1 276 30 0 0 chr10 71512938 71512971 -68803794 + (TTTTC)n Simple_repeat Simple_repeat 5 37 0 344 129 0 43 chr10 71512971 71513009 -68803756 + (TCCC)n Simple_repeat Simple_repeat 32 70 0 2305 97 0 3 chr10 71513020 71513330 -68803435 - AluSq SINE Alu -3 310 2 1710 155 16 88 chr10 71513405 71513791 -68802974 - MLT1B LTR MaLR -6 620 34 1490 99 5 0 chr10 71514500 71514711 -68802054 - AluJb SINE Alu -100 212 1 2086 228 67 12 chr10 71514739 71515249 -68801516 + MLT1H LTR MaLR 12 549 0 283 305 84 0 chr10 71515849 71515944 -68800821 + L2 LINE L2 3147 3249 -23 1879 194 87 23 chr10 71516004 71516443 -68800322 - MLT1C LTR MaLR 0 467 1 2117 78 24 7 chr10 71516509 71516803 -68799962 - AluSx SINE Alu -13 299 1 505 228 125 45 chr10 71517343 71517567 -68799198 + AluSq SINE Alu 46 287 -26 986 149 11 50 chr10 71517624 71517805 -68798960 - AluSx SINE Alu -138 174 1 1571 89 62 9 chr10 71517882 71518138 -68798627 + AluSx SINE Alu 47 314 0 1955 102 0 60 chr10 71518150 71518464 -68798301 + AluSg SINE Alu 13 307 -3 2226 93 0 3 chr10 71518466 71518799 -68797966 + AluY SINE Alu 1 311 0 548 230 89 2 chr10 71518861 71519021 -68797744 - MIR SINE MIR -85 123 3 2096 94 3 36 chr10 71519118 71519427 -68797338 - AluSx SINE Alu -13 299 1 1370 164 34 61 chr10 71519563 71519856 -68796909 - AluJo SINE Alu -23 289 5 231 264 0 0 chr10 71520189 71520242 -68796523 + MIR SINE MIR 103 155 -107 245 125 42 42 chr10 71520320 71520368 -68796397 + Charlie1 DNA MER1_type 1 48 -2713 1163 116 155 0 chr10 71520374 71520625 -68796140 + Charlie1 DNA MER1_type 2349 2638 -123 594 175 0 35 chr10 71520625 71520639 -68796126 - 7SLRNA srpRNA srpRNA -3 317 304 207 0 0 0 chr10 71520639 71520662 -68796103 + (TTG)n Simple_repeat Simple_repeat 2 24 0 594 175 0 35 chr10 71520662 71520761 -68796004 - 7SLRNA srpRNA srpRNA -16 304 208 562 154 27 0 chr10 71520761 71520871 -68795894 + Charlie1 DNA MER1_type 2648 2760 -1 212 162 0 0 chr10 71521540 71521577 -68795188 + (CTG)n Simple_repeat Simple_repeat 1 37 0 213 108 0 0 chr10 71521596 71521633 -68795132 + (CGG)n Simple_repeat Simple_repeat 3 39 0 26 30 0 0 chr10 71521717 71521750 -68795015 + GC_rich Low_complexity Low_complexity 1 33 0 1666 115 37 4 chr10 71523379 71523649 -68793116 - AluJb SINE Alu -33 279 1 1654 64 0 0 chr10 71524261 71524491 -68792274 - AluY SINE Alu 0 312 83 6167 61 29 40 chr10 71524491 71525656 -68791109 - SVA Other Other -588 1385 434 733 84 0 0 chr10 71525656 71525751 -68791014 - AluY SINE Alu -216 95 1 246 323 71 32 chr10 71526764 71526919 -68789846 - MIR3 SINE MIR -32 176 16 2231 88 27 0 chr10 71527402 71527699 -68789066 - AluSq SINE Alu -8 305 1 533 175 39 0 chr10 71528336 71528439 -68788326 + MLT1A2 LTR MaLR 268 374 0 1576 175 7 11 chr10 71528890 71529175 -68787590 - AluJo SINE Alu -26 286 3 855 102 0 0 chr10 71529177 71529304 -68787461 - L1M2 LINE L1 -823 5489 5363 246 347 92 20 chr10 71529591 71529842 -68786923 - L2 LINE L2 -86 3186 2918 2159 113 0 3 chr10 71530251 71530561 -68786204 - AluSx SINE Alu -3 309 1 752 117 8 17 chr10 71531352 71531472 -68785293 + AluSg/x SINE Alu 189 307 -2 530 229 0 8 chr10 71531514 71531632 -68785133 + MIR SINE MIR 124 240 -22 1186 142 39 25 chr10 71531662 71531866 -68784899 + AluSq SINE Alu 27 233 -80 29 0 0 0 chr10 71531878 71531907 -68784858 + AT_rich Low_complexity Low_complexity 1 29 0 578 272 75 72 chr10 71531938 71532273 -68784492 + L1MEd LINE L1 425 760 -5359 1763 133 56 25 chr10 71532310 71532595 -68784170 + AluSg SINE Alu 1 294 -16 1521 171 4 4 chr10 71532619 71532882 -68783883 + AluJo SINE Alu 44 306 -6 278 157 0 0 chr10 71532929 71532980 -68783785 - U5 snRNA snRNA -65 51 1 928 145 0 47 chr10 71533012 71533184 -68783581 - AluJb SINE Alu -49 263 100 630 247 169 96 chr10 71534060 71534275 -68782490 - L1ME4a LINE L1 0 6121 5923 2387 72 0 3 chr10 71534275 71534580 -68782185 - AluY SINE Alu -7 304 1 630 247 169 96 chr10 71534580 71534659 -68782106 - L1ME4a LINE L1 -198 5923 5851 1774 127 23 47 chr10 71534659 71534959 -68781806 + AluSx SINE Alu 1 293 -19 630 247 169 96 chr10 71534959 71535047 -68781718 - L1ME4a LINE L1 -270 5851 5710 1815 144 27 7 chr10 71536190 71536482 -68780283 - AluSx SINE Alu -14 298 1 750 234 110 13 chr10 71536674 71536901 -68779864 - MIR SINE MIR 0 262 14 249 278 21 41 chr10 71537089 71537186 -68779579 - L2 LINE L2 -10 3262 3168 183 259 52 0 chr10 71537238 71537296 -68779469 - L2 LINE L2 -213 3059 2999 180 254 0 0 chr10 71537555 71537614 -68779151 + (CA)n Simple_repeat Simple_repeat 2 60 0 200 181 139 69 chr10 71537627 71537699 -68779066 + L2 LINE L2 3237 3313 0 193 328 0 0 chr10 71537926 71537984 -68778781 + MIR SINE MIR 176 233 -29 334 115 39 0 chr10 71538084 71538136 -68778629 + MER112 DNA MER1_type 1 54 -206 310 247 132 32 chr10 71539189 71539356 -68777409 - MIR SINE MIR -5 203 19 550 304 91 13 chr10 71539717 71539947 -68776818 + MIR SINE MIR 5 252 -10 2111 97 0 39 chr10 71540195 71540339 -68776426 + AluSp SINE Alu 1 128 -185 2046 99 51 3 chr10 71540339 71540631 -68776134 + AluSq SINE Alu 1 306 -7 2111 97 0 39 chr10 71540631 71540794 -68775971 + AluSp SINE Alu 128 296 -17 191 330 57 11 chr10 71540810 71540898 -68775867 + L2 LINE L2 3139 3230 -42 1816 136 97 3 chr10 71541630 71541938 -68774827 - MER1B DNA MER1_type 0 337 1 232 241 103 0 chr10 71543000 71543058 -68773707 + MIR SINE MIR 128 191 -71 25 0 0 0 chr10 71544461 71544486 -68772279 + GC_rich Low_complexity Low_complexity 1 25 0 23 78 0 0 chr10 71544591 71544642 -68772123 + GC_rich Low_complexity Low_complexity 1 51 0 241 155 172 0 chr10 71544819 71544877 -68771888 + L1ME1 LINE L1 6055 6122 -44 1501 128 0 0 chr10 71544890 71545109 -68771656 + AluJb SINE Alu 87 305 -7 1814 170 0 0 chr10 71545185 71545474 -68771291 + AluJb SINE Alu 1 289 -23 263 104 21 0 chr10 71545737 71545785 -68770980 + (TC)n Simple_repeat Simple_repeat 2 50 0 558 257 112 0 chr10 71545785 71545937 -68770828 - MIR SINE MIR -66 196 28 336 276 134 16 chr10 71546487 71546614 -68770151 - MIR SINE MIR -100 162 21 219 250 261 0 chr10 71547363 71547451 -68769314 + MIR SINE MIR 34 144 -64 2258 78 3 19 chr10 71547656 71547965 -68768800 - AluSq SINE Alu -5 308 5 424 315 60 26 chr10 71547979 71548211 -68768554 - L1ME4a LINE L1 -5 6116 5877 2043 126 0 0 chr10 71548275 71548568 -68768197 + AluSx SINE Alu 1 293 -19 25 31 0 0 chr10 71548929 71548961 -68767804 + GC_rich Low_complexity Low_complexity 1 32 0 183 80 0 0 chr10 71549681 71549706 -68767059 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 307 292 123 19 chr10 71549739 71549893 -68766872 - MIR SINE MIR -8 254 85 492 189 144 33 chr10 71549899 71550052 -68766713 + MER69A DNA AcHobo 1 170 -7 766 316 145 34 chr10 71550501 71551377 -68765388 + L2 LINE L2 1776 2870 -402 2348 80 3 0 chr10 71551377 71551678 -68765087 + AluSp SINE Alu 1 302 -11 766 316 145 34 chr10 71551678 71552127 -68764638 + L2 LINE L2 2870 3267 -5 1951 150 0 6 chr10 71552382 71552696 -68764069 - AluJb SINE Alu 0 312 1 751 244 79 9 chr10 71552862 71553091 -68763674 + MIR SINE MIR 17 261 -1 2087 69 35 21 chr10 71553727 71554015 -68762750 + AluY SINE Alu 2 293 -18 765 292 121 30 chr10 71554133 71554564 -68762201 - L2 LINE L2 -4 3309 2840 1125 229 49 46 chr10 71554566 71554817 -68761948 - L1ME3 LINE L1 -22 6140 5886 2267 93 0 7 chr10 71554817 71555118 -68761647 - AluSq SINE Alu -14 299 1 1125 229 49 46 chr10 71555118 71555211 -68761554 - L1ME3 LINE L1 -276 5886 5795 2185 102 0 7 chr10 71555229 71555532 -68761233 - AluSx SINE Alu -11 301 1 459 0 0 0 chr10 71555544 71555595 -68761170 + (TATG)n Simple_repeat Simple_repeat 4 54 0 2326 64 0 0 chr10 71555595 71555878 -68760887 - AluY SINE Alu -28 283 1 404 265 31 0 chr10 71555915 71556013 -68760752 - MIR3 SINE MIR -41 167 67 292 299 109 36 chr10 71556075 71556212 -68760553 - MIR SINE MIR -6 256 110 215 238 98 41 chr10 71556485 71556607 -68760158 + MIR3 SINE MIR 59 187 -21 966 140 0 56 chr10 71556808 71556852 -68759913 - L1MB3 LINE L1 -7 6176 6131 2155 108 3 0 chr10 71556852 71557147 -68759618 - AluSg SINE Alu -14 296 1 966 140 0 56 chr10 71557147 71557280 -68759485 - L1MB3 LINE L1 -52 6131 6009 196 255 46 154 chr10 71557888 71558194 -68758571 + L3 LINE CR1 1188 1460 -117 492 218 21 49 chr10 71558243 71558385 -68758380 + MIR SINE MIR 80 217 -45 271 302 87 0 chr10 71558615 71558743 -68758022 - MIR SINE MIR -63 145 31 2164 107 0 0 chr10 71558857 71559148 -68757617 - AluSq SINE Alu -22 291 1 441 0 0 0 chr10 71559307 71559356 -68757409 + (TG)n Simple_repeat Simple_repeat 2 50 0 769 92 0 0 chr10 71559356 71559454 -68757311 - AluSg/x SINE Alu -27 285 188 332 258 218 0 chr10 71559454 71559578 -68757187 - MIR SINE MIR -98 164 14 211 311 42 50 chr10 71559871 71559990 -68756775 + MER5A DNA MER1_type 72 189 0 198 286 0 0 chr10 71560290 71560332 -68756433 + L3 LINE CR1 1426 1467 -110 2259 103 0 0 chr10 71560397 71560698 -68756067 - AluSx SINE Alu -11 301 1 435 318 40 0 chr10 71560760 71560933 -68755832 + L1MC5 LINE L1 7745 7924 -37 240 153 28 28 chr10 71561126 71561198 -68755567 + (TTATA)n Simple_repeat Simple_repeat 1 72 0 1978 134 0 40 chr10 71561205 71561388 -68755377 - AluSx SINE Alu -4 308 142 2002 107 0 74 chr10 71561388 71561726 -68755039 - AluSq SINE Alu 0 313 1 1978 134 0 40 chr10 71561726 71561863 -68754902 - AluSx SINE Alu -170 142 1 682 328 51 8 chr10 71562101 71562416 -68754349 - L1MC4a LINE L1 -466 5704 5535 190 0 0 0 chr10 71562861 71562882 -68753883 + (TTTA)n Simple_repeat Simple_repeat 3 164 0 2347 88 0 0 chr10 71562882 71563165 -68753600 - AluSq SINE Alu -30 283 1 715 208 68 34 chr10 71563467 71563674 -68753091 - MIR SINE MIR -2 260 47 352 264 109 0 chr10 71563880 71563990 -68752775 + L2 LINE L2 3136 3257 -15 508 170 64 50 chr10 71564105 71564246 -68752519 + L2 LINE L2 3159 3301 -12 2256 83 20 23 chr10 71564256 71564557 -68752208 - AluSx SINE Alu -12 300 1 2441 53 0 4 chr10 71564945 71565226 -68751539 - AluY SINE Alu -31 280 1 186 224 0 0 chr10 71567091 71567140 -68749625 + CT-rich Low_complexity Low_complexity 4 52 0 2128 183 118 25 chr10 71569043 71569562 -68747203 - MLT1F1 LTR MaLR 0 567 1 2067 101 0 50 chr10 71570382 71570708 -68746057 - AluSx SINE Alu 0 311 1 180 0 0 0 chr10 71572091 71572111 -68744654 + (T)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr10 71572396 71572426 -68744339 + AT_rich Low_complexity Low_complexity 1 30 0 355 314 165 0 chr10 71573289 71573477 -68743288 + MIR SINE MIR 12 230 -32 2379 92 0 0 chr10 71573757 71574049 -68742716 - AluSg SINE Alu -18 292 1 1600 197 7 17 chr10 71574311 71574610 -68742155 + AluJo SINE Alu 1 296 -16 243 294 147 18 chr10 71575097 71575260 -68741505 + MIR3 SINE MIR 12 195 -13 851 131 0 29 chr10 71575671 71575808 -68740957 - FLAM_C SINE Alu 0 133 1 243 279 113 22 chr10 71576079 71576235 -68740530 - MIR SINE MIR -64 144 33 2193 125 7 0 chr10 71577550 71577847 -68738918 - AluJb SINE Alu -13 299 1 2383 94 0 0 chr10 71578498 71578795 -68737970 - AluSq SINE Alu -16 297 1 436 340 100 5 chr10 71578896 71579096 -68737669 - MIR SINE MIR -24 238 20 265 280 76 68 chr10 71579100 71579218 -68737547 - MIR3 SINE MIR -11 197 79 228 275 0 29 chr10 71579254 71579323 -68737442 + L2 LINE L2 3189 3255 -17 460 327 20 15 chr10 71580213 71580412 -68736353 - MIR SINE MIR -55 207 8 1459 96 80 0 chr10 71580510 71580709 -68736056 + AluSp SINE Alu 87 301 -12 2397 70 10 3 chr10 71581294 71581592 -68735173 + AluSp SINE Alu 2 301 -12 187 286 32 0 chr10 71581615 71581678 -68735087 + MIR SINE MIR 119 183 -79 2202 110 3 23 chr10 71582140 71582441 -68734324 + AluSx SINE Alu 1 295 -17 790 229 104 9 chr10 71582475 71582706 -68734059 + MIR SINE MIR 9 261 -1 2307 90 3 0 chr10 71583145 71583434 -68733331 - AluSc SINE Alu -19 290 1 2197 116 13 3 chr10 71583927 71584230 -68732535 + AluSg SINE Alu 1 306 -4 327 331 44 7 chr10 71585135 71585271 -68731494 - MIR SINE MIR -32 230 90 282 222 0 0 chr10 71586828 71586882 -68729883 - MIR SINE MIR -8 254 201 1852 152 3 14 chr10 71586934 71587254 -68729511 + AluSx SINE Alu 1 317 0 794 131 23 0 chr10 71587539 71587669 -68729096 + FLAM_C SINE Alu 1 133 0 1706 140 25 7 chr10 71587690 71587968 -68728797 + AluSp SINE Alu 1 283 -30 2292 108 6 13 chr10 71588347 71588661 -68728104 + AluSx SINE Alu 1 312 0 357 402 18 25 chr10 71588665 71588941 -68727824 - L1 LINE L1 -913 5233 4960 308 250 73 24 chr10 71588951 71589075 -68727690 + MIR SINE MIR 20 149 -113 4830 205 67 48 chr10 71589118 71589238 -68727527 - Charlie1a DNA MER1_type -1328 1433 1317 2369 97 13 0 chr10 71589238 71589536 -68727229 + AluSx SINE Alu 1 302 -10 4830 205 67 48 chr10 71589536 71590307 -68726458 - Charlie1a DNA MER1_type -1444 1317 562 2166 86 3 31 chr10 71590307 71590649 -68726116 + AluSp SINE Alu 1 334 0 4830 205 67 48 chr10 71590649 71590732 -68726033 - Charlie1a DNA MER1_type -2199 562 482 2012 136 10 10 chr10 71590732 71591026 -68725739 + AluJb SINE Alu 1 294 -18 4830 205 67 48 chr10 71591026 71591452 -68725313 - Charlie1a DNA MER1_type -2279 482 4 31 68 0 0 chr10 71592054 71592113 -68724652 + AT_rich Low_complexity Low_complexity 1 59 0 2302 104 0 31 chr10 71592113 71592431 -68724334 + AluSq SINE Alu 1 308 -5 1809 162 11 0 chr10 71592431 71592709 -68724056 - AluJo SINE Alu -25 287 7 274 111 0 127 chr10 71592710 71592735 -68724030 - AluJb SINE Alu -163 139 112 473 47 16 0 chr10 71592735 71592799 -68723966 + (TG)n Simple_repeat Simple_repeat 2 66 0 274 111 0 127 chr10 71592799 71592836 -68723929 - AluJb SINE Alu -190 112 85 420 272 76 13 chr10 71593584 71593742 -68723023 + MIR3 SINE MIR 31 198 -10 315 0 0 0 chr10 71593781 71593816 -68722949 + (TG)n Simple_repeat Simple_repeat 1 35 0 1153 262 66 33 chr10 71596167 71596499 -68720266 - MLT1J LTR MaLR 0 511 161 1314 180 118 54 chr10 71596499 71596743 -68720022 - MSTD LTR MaLR 0 396 118 2535 61 3 0 chr10 71596743 71597039 -68719726 + AluSg SINE Alu 1 297 -13 1314 180 118 54 chr10 71597039 71597166 -68719599 - MSTD LTR MaLR -278 118 1 1153 262 66 33 chr10 71597166 71597256 -68719509 - MLT1J LTR MaLR -350 161 75 328 261 11 0 chr10 71597867 71597955 -68718810 - Charlie8 DNA MER1_type -2241 176 88 2058 112 6 55 chr10 71598210 71598522 -68718243 + AluSx SINE Alu 2 298 -14 340 248 86 0 chr10 71598579 71598684 -68718081 - L1MC4 LINE L1 -138 7904 7791 295 318 31 0 chr10 71599925 71600054 -68716711 - L1ME4a LINE L1 -20 6101 5969 292 370 77 18 chr10 71600637 71600834 -68715931 - MIR SINE MIR -23 239 33 208 346 12 0 chr10 71600967 71601048 -68715717 - L2 LINE L2 -3 3269 3188 939 234 19 72 chr10 71601085 71601128 -68715637 - MER33 DNA MER1_type -2261 324 280 1932 122 52 14 chr10 71601128 71601416 -68715349 - AluSx SINE Alu -13 299 1 939 234 19 72 chr10 71601416 71601544 -68715221 - MER33 DNA MER1_type -2305 280 173 1630 185 23 23 chr10 71601544 71601852 -68714913 - AluJo SINE Alu -4 308 1 939 234 19 72 chr10 71601852 71601986 -68714779 - MER33 DNA MER1_type -2412 173 34 583 279 29 17 chr10 71602046 71602218 -68714547 - MIR SINE MIR -25 237 64 395 247 47 68 chr10 71602289 71602339 -68714426 - L1ME1 LINE L1 -5 6161 6111 2246 127 0 0 chr10 71602339 71602638 -68714127 - AluSx SINE Alu -13 299 1 395 247 47 68 chr10 71602638 71602777 -68713988 - L1ME1 LINE L1 -55 6111 5976 1483 255 68 5 chr10 71602785 71602893 -68713872 - L1ME1 LINE L1 -249 5917 5817 2494 75 7 0 chr10 71602893 71603198 -68713567 - AluSp SINE Alu -6 307 1 1483 255 68 5 chr10 71603198 71603618 -68713147 - L1ME1 LINE L1 -349 5817 5318 189 246 0 35 chr10 71603676 71603733 -68713032 + MIR SINE MIR 177 231 -31 363 344 13 7 chr10 71603950 71604104 -68712661 + MIR3 SINE MIR 3 157 -51 911 135 0 23 chr10 71604106 71604239 -68712526 - FLAM_C SINE Alu -13 130 1 1565 191 38 57 chr10 71604244 71604559 -68712206 - MLT1A1 LTR MaLR 0 365 57 2440 106 0 0 chr10 71604559 71604871 -68711894 - AluSx SINE Alu 0 312 1 1565 191 38 57 chr10 71604871 71604927 -68711838 - MLT1A1 LTR MaLR -308 57 1 2514 96 0 0 chr10 71605675 71605988 -68710777 - AluSq SINE Alu 0 313 1 204 284 128 18 chr10 71606333 71606442 -68710323 + MIR SINE MIR 121 241 -21 2238 93 3 7 chr10 71606524 71606814 -68709951 - AluSx SINE Alu -7 305 17 449 217 136 32 chr10 71606839 71607069 -68709696 - Charlie4 DNA MER1_type -15 1946 1704 259 264 99 0 chr10 71607458 71607549 -68709216 - Charlie4 DNA MER1_type -1677 284 185 353 153 51 71 chr10 71607826 71607924 -68708841 - MIR3 SINE MIR -25 183 88 410 223 29 0 chr10 71609516 71609619 -68707146 - L1ME4a LINE L1 -38 6083 5978 605 296 15 25 chr10 71609722 71609925 -68706840 - L1ME4a LINE L1 -301 5820 5620 2164 115 3 35 chr10 71609996 71610308 -68706457 - AluSx SINE Alu -10 302 1 207 247 39 52 chr10 71610683 71610760 -68706005 + L2 LINE L2 3180 3255 -17 282 316 0 0 chr10 71611243 71611322 -68705443 - MIR SINE MIR -68 140 62 362 244 14 18 chr10 71612129 71612240 -68704525 + MIR SINE MIR 43 151 -63 490 224 73 73 chr10 71612361 71612405 -68704360 - MIR3 SINE MIR -14 194 151 865 235 47 0 chr10 71612405 71612618 -68704147 + MER58A DNA MER1_type 2 224 0 490 224 73 73 chr10 71612618 71612765 -68704000 - MIR3 SINE MIR -56 152 3 2556 102 0 0 chr10 71612786 71613148 -68703617 - L1PA5 LINE L1 -9 6145 5784 349 272 22 0 chr10 71613373 71613465 -68703300 - MIR SINE MIR -15 247 154 1551 238 66 24 chr10 71613630 71614114 -68702651 - MLT1J LTR MaLR 0 446 1 264 345 73 34 chr10 71614586 71614792 -68701973 + L2 LINE L2 2996 3209 -63 615 278 28 11 chr10 71615405 71615585 -68701180 - MIR SINE MIR -72 190 8 401 321 55 77 chr10 71615861 71616225 -68700540 - L2 LINE L2 0 3272 2917 2003 118 44 3 chr10 71616713 71617009 -68699756 + AluSg SINE Alu 1 308 -2 422 232 8 0 chr10 71618240 71618486 -68698279 + (TG)n Simple_repeat Simple_repeat 1 248 0 284 287 41 0 chr10 71618520 71618624 -68698141 + MIR SINE MIR 46 149 -73 398 279 8 16 chr10 71619226 71619348 -68697417 + MIR SINE MIR 23 143 -65 398 254 6 17 chr10 71620419 71620592 -68696173 + CT-rich Low_complexity Low_complexity 4 174 0 * 744 123 5 43 chr10 71620550 71620737 -68696028 + (TCC)n Simple_repeat Simple_repeat 1 180 0 262 200 0 0 chr10 71620738 71620783 -68695982 + polypyrimidine Low_complexity Low_complexity 4 48 0 1402 165 55 0 chr10 71620784 71621021 -68695744 - AluJo SINE Alu -33 279 30 1648 141 0 103 chr10 71621050 71621398 -68695367 + AluJb SINE Alu 1 312 0 305 349 7 41 chr10 71621448 71621594 -68695171 - L1ME LINE L1 -338 5783 5643 925 236 37 9 chr10 71621595 71621811 -68694954 + MER58A DNA MER1_type 3 224 0 406 343 41 0 chr10 71621988 71622134 -68694631 + MIR SINE MIR 33 184 -78 1752 163 17 3 chr10 71622169 71622463 -68694302 - AluJb SINE Alu -14 298 1 397 229 39 39 chr10 71625216 71625395 -68691370 + (TG)n Simple_repeat Simple_repeat 2 180 0 269 253 37 19 chr10 71625666 71625828 -68690937 + (TG)n Simple_repeat Simple_repeat 2 166 0 742 127 95 16 chr10 71627495 71627515 -68689250 - AluSq/x SINE Alu -175 137 120 3897 154 41 10 chr10 71627515 71628202 -68688563 - L1MB3 LINE L1 0 6183 5476 742 127 95 16 chr10 71628202 71628307 -68688458 - AluSq/x SINE Alu -192 120 2 2350 166 55 7 chr10 71628311 71628958 -68687807 - L1MB3 LINE L1 -688 5492 4826 386 326 66 0 chr10 71629023 71629219 -68687546 - MIR SINE MIR -36 226 18 184 344 125 30 chr10 71630428 71630733 -68686032 - L2 LINE L2 -443 2871 2538 826 110 0 39 chr10 71630836 71630963 -68685802 - FLAM_C SINE Alu 0 143 22 2088 110 0 0 chr10 71631134 71631444 -68685321 + AluSx SINE Alu 1 310 0 1401 186 4 4 chr10 71631876 71632129 -68684636 + AluJb SINE Alu 29 281 -31 213 39 0 0 chr10 71632132 71632158 -68684607 + (CAA)n Simple_repeat Simple_repeat 2 27 0 228 67 0 0 chr10 71632632 71632662 -68684103 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 2035 104 21 0 chr10 71633203 71633491 -68683274 + AluSx SINE Alu 1 294 -18 896 122 0 0 chr10 71634117 71634248 -68682517 + FLAM_C SINE Alu 12 142 -1 540 229 14 36 chr10 71635339 71635479 -68681286 - MER5B DNA MER1_type -39 139 3 590 208 181 0 chr10 71635489 71635638 -68681127 - MER5A DNA MER1_type 0 189 14 3027 155 34 5 chr10 71635663 71636218 -68680547 - L1MB7 LINE L1 -25 6159 5589 196 284 62 25 chr10 71636223 71636304 -68680461 - MIR3 SINE MIR -122 86 3 1002 271 104 31 chr10 71637642 71638217 -68678548 - L1MC5 LINE L1 -34 7927 7311 283 253 0 25 chr10 71638324 71638403 -68678362 - L1MC5 LINE L1 -781 7180 7104 230 200 204 44 chr10 71638780 71638922 -68677843 - MIR3 SINE MIR -67 141 9 2178 90 0 23 chr10 71639338 71639660 -68677105 + AluSx SINE Alu 13 312 0 208 299 0 26 chr10 71640185 71640262 -68676503 + CT-rich Low_complexity Low_complexity 4 78 0 186 240 0 0 chr10 71640528 71640578 -68676187 + CT-rich Low_complexity Low_complexity 30 79 0 1727 152 12 64 chr10 71640596 71641095 -68675670 - AluJo SINE Alu 0 482 1 457 267 163 25 chr10 71641863 71642426 -68674339 - L1MB7 LINE L1 -627 5537 4906 549 260 8 0 chr10 71642430 71642557 -68674208 - FLAM_A SINE Alu -1 132 5 516 283 107 60 chr10 71642721 71643141 -68673624 + MLT1K LTR MaLR 126 565 -23 480 279 70 85 chr10 71643268 71644204 -68672561 - L1MB7 LINE L1 -1438 4708 3795 2139 123 0 0 chr10 71644204 71644504 -68672261 - AluSx SINE Alu -12 300 1 480 279 70 85 chr10 71644504 71644873 -68671892 - L1MB7 LINE L1 -2351 3795 3422 2145 118 0 0 chr10 71644930 71645226 -68671539 + AluSx SINE Alu 1 296 -16 1481 189 32 4 chr10 71645239 71645520 -68671245 + AluJo SINE Alu 7 295 -17 29 0 0 0 chr10 71645629 71645658 -68671107 + AT_rich Low_complexity Low_complexity 1 29 0 187 289 19 0 chr10 71646628 71646691 -68670074 + MIR SINE MIR 90 142 -66 191 322 44 0 chr10 71646870 71646960 -68669805 - MIR SINE MIR -106 156 63 1524 137 44 48 chr10 71647401 71647694 -68669071 - AluJb SINE Alu -20 292 1 782 281 5 10 chr10 71647740 71647939 -68668826 + MER41D LTR ERV1 360 557 0 305 239 28 64 chr10 71648895 71649004 -68667761 + MIR SINE MIR 40 144 -118 241 231 62 0 chr10 71649548 71649613 -68667152 - L2 LINE L2 -62 3210 3142 279 0 0 0 chr10 71649639 71649670 -68667095 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 1783 147 8 22 chr10 71650002 71650355 -68666410 + MER4A LTR ERV1 257 663 -1 2782 142 71 46 chr10 71650410 71650678 -68666087 + L1MB4 LINE L1 5559 5819 -361 2062 144 0 0 chr10 71650678 71650984 -68665781 - AluSx SINE Alu -5 307 2 2782 142 71 46 chr10 71650984 71651322 -68665443 + L1MB4 LINE L1 5819 6180 0 335 44 0 0 chr10 71651568 71651613 -68665152 - MADE1 DNA Mariner 0 80 36 312 17 150 50 chr10 71651656 71651716 -68665049 - MADE1 DNA Mariner -12 68 3 3949 126 50 51 chr10 71652142 71652867 -68663898 - LTR8A LTR ERV1 -3 724 1 4514 113 21 0 chr10 71653266 71653888 -68662877 - MER41B LTR ERV1 0 635 1 459 0 0 0 chr10 71654809 71654860 -68661905 + (TATG)n Simple_repeat Simple_repeat 2 52 0 877 119 8 0 chr10 71654860 71654986 -68661779 - FRAM SINE Alu -25 151 25 379 318 68 0 chr10 71655095 71655227 -68661538 + L3 LINE CR1 1347 1487 -90 362 279 215 17 chr10 71655253 71655490 -68661275 - L2 LINE L2 0 3272 2989 1338 249 49 37 chr10 71655539 71655949 -68660816 - LTR16C LTR ERVL 0 491 77 434 320 92 52 chr10 71656371 71656962 -68659803 + L1M4c LINE L1 698 3736 -2646 1448 245 30 28 chr10 71657064 71657230 -68659535 - L1ME3 LINE L1 -130 6032 5868 1609 106 0 4 chr10 71657230 71657456 -68659309 - AluSg/x SINE Alu -13 299 75 1448 245 30 28 chr10 71657456 71657754 -68659011 - L1ME3 LINE L1 -294 5868 5567 1902 139 3 0 chr10 71657809 71658097 -68658668 - AluJb SINE Alu -23 289 1 804 305 39 12 chr10 71658111 71658521 -68658244 - L1ME3 LINE L1 -1112 5034 4614 442 273 16 8 chr10 71658698 71658819 -68657946 + MIR SINE MIR 16 137 -71 1019 191 0 51 chr10 71659535 71659771 -68656994 - AluJo SINE Alu -3 309 86 399 301 37 10 chr10 71659858 71660022 -68656743 + MIR SINE MIR 41 210 -52 455 256 91 0 chr10 71660033 71660154 -68656611 - L2 LINE L2 0 3313 3182 2564 97 16 0 chr10 71660372 71660744 -68656021 - MER83 LTR ERV1 -70 378 1 1114 254 186 14 chr10 71660786 71661548 -68655217 - L2 LINE L2 -253 3060 2168 203 61 30 0 chr10 71662037 71662070 -68654695 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 191 278 74 0 chr10 71662080 71662134 -68654631 + MIR SINE MIR 127 184 -78 580 220 88 38 chr10 71664639 71664798 -68651967 + MER5B DNA MER1_type 12 178 0 314 204 38 56 chr10 71666739 71666859 -68649906 - MIR SINE MIR -59 149 39 268 266 230 0 chr10 71667949 71668062 -68648703 - MIR SINE MIR -20 242 104 559 161 45 54 chr10 71669822 71670000 -68646765 + MIR SINE MIR 12 185 -58 4233 165 60 28 chr10 71671084 71671677 -68645088 + L1MA8 LINE L1 5168 5848 -443 2385 93 3 22 chr10 71671677 71671989 -68644776 + AluSq SINE Alu 1 306 -7 4233 165 60 28 chr10 71671989 71672424 -68644341 + L1MA8 LINE L1 5848 6268 -23 2208 125 0 0 chr10 71672489 71672784 -68643981 - AluSx SINE Alu -17 295 1 221 301 14 41 chr10 71672862 71672935 -68643830 + MIR SINE MIR 186 256 -6 188 295 107 36 chr10 71673464 71673576 -68643189 - L2 LINE L2 -23 3290 3171 323 279 42 91 chr10 71674356 71674431 -68642334 + MIR SINE MIR 87 164 -98 2409 109 0 0 chr10 71674431 71674743 -68642022 + AluSx SINE Alu 1 312 0 323 279 42 91 chr10 71674743 71674832 -68641933 + MIR SINE MIR 164 243 -19 1798 146 36 0 chr10 71675583 71675858 -68640907 + AluJo SINE Alu 13 297 -15 555 227 114 17 chr10 71676206 71676382 -68640383 - LTR67 LTR ERVL -2 555 363 762 246 154 48 chr10 71676557 71676780 -68639985 + LTR16C LTR ERVL 84 361 -130 2308 93 7 17 chr10 71676780 71677082 -68639683 - AluSx SINE Alu -13 299 1 762 246 154 48 chr10 71677082 71677216 -68639549 + LTR16C LTR ERVL 361 479 -12 313 289 142 11 chr10 71677365 71677555 -68639210 - LTR33 LTR ERVL -2 519 305 1629 158 47 4 chr10 71677567 71677820 -68638945 + AluJb SINE Alu 1 264 -48 228 360 0 0 chr10 71678232 71678307 -68638458 + MIR SINE MIR 67 141 -67 584 297 8 56 chr10 71679241 71679507 -68637258 + Charlie8 DNA MER1_type 139 391 -2026 1510 74 46 5 chr10 71680019 71680235 -68636530 + MER30 DNA MER1_type 6 230 0 287 161 97 16 chr10 71681526 71681588 -68635177 - MIR SINE MIR -165 97 31 961 76 0 0 chr10 71681738 71681856 -68634909 + FLAM_C SINE Alu 1 118 -15 272 205 157 0 chr10 71682212 71682295 -68634470 - MIR SINE MIR -83 125 30 307 202 157 0 chr10 71683317 71683406 -68633359 - MIR3 SINE MIR -16 192 90 203 182 0 55 chr10 71683628 71683683 -68633082 + CT-rich Low_complexity Low_complexity 2 53 0 2281 114 0 0 chr10 71683816 71684115 -68632650 + AluSx SINE Alu 1 299 -13 188 222 264 14 chr10 71684237 71684309 -68632456 - L3 LINE CR1 -129 1448 1359 439 280 95 21 chr10 71684679 71684868 -68631897 - MIR3 SINE MIR -3 205 3 412 287 49 18 chr10 71685356 71685520 -68631245 + MIR SINE MIR 14 182 -80 357 318 69 29 chr10 71686265 71686438 -68630327 + MIR3 SINE MIR 4 183 -25 4314 181 22 20 chr10 71686704 71686889 -68629876 - L1MB7 LINE L1 -7 6177 5994 2349 95 0 43 chr10 71686889 71687214 -68629551 - AluSx SINE Alu -1 311 1 4314 181 22 20 chr10 71687214 71688055 -68628710 - L1MB7 LINE L1 -190 5994 5152 1103 175 0 0 chr10 71688055 71688215 -68628550 + AluJo SINE Alu 1 160 -152 1629 166 0 25 chr10 71688235 71688513 -68628252 + AluJb SINE Alu 26 296 -16 2524 54 0 7 chr10 71688522 71688818 -68627947 + AluY SINE Alu 1 294 -17 1199 153 26 4 chr10 71688820 71689049 -68627716 - L1MB7 LINE L1 -984 5162 4929 1718 198 11 47 chr10 71689124 71689488 -68627277 + MLT1A1 LTR MaLR 12 362 -3 7050 189 17 72 chr10 71689491 71691054 -68625711 + MLT1A1-int LTR MaLR 1 1648 -87 2259 125 0 13 chr10 71691054 71691367 -68625398 - AluSq SINE Alu -4 309 1 7050 189 17 72 chr10 71691367 71691444 -68625321 + MLT1A1-int LTR MaLR 1648 1549 -186 1803 116 71 8 chr10 71691444 71691732 -68625033 - AluSx SINE Alu 0 305 1 7050 189 17 72 chr10 71691732 71691789 -68624976 + MLT1A1-int LTR MaLR 1548 1607 -128 729 176 49 14 chr10 71691796 71691938 -68624827 - FRAM SINE Alu -5 171 25 684 153 7 35 chr10 71691942 71692086 -68624679 + MLT1A1-int LTR MaLR 1596 1735 0 240 35 0 0 chr10 71692094 71692123 -68624642 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2087 104 4 14 chr10 71692129 71692409 -68624356 - AluSq SINE Alu -36 277 1 1372 192 79 57 chr10 71692419 71692773 -68623992 + MLT1A1 LTR MaLR 4 365 0 1405 260 91 70 chr10 71693188 71693391 -68623374 - L1MEd LINE L1 -2680 3449 3252 2529 60 3 0 chr10 71693391 71693690 -68623075 + AluY SINE Alu 1 300 -11 1405 260 91 70 chr10 71693690 71693837 -68622928 - L1MEd LINE L1 -2877 3252 3110 2863 10 0 0 chr10 71693837 71694142 -68622623 + AluYa5 SINE Alu 1 305 -6 1405 260 91 70 chr10 71694142 71694928 -68621837 - L1MEd LINE L1 -3019 3110 2288 279 93 0 160 chr10 71694929 71694979 -68621786 - L1MB3 LINE L1 -2 6181 6145 2409 90 0 7 chr10 71694979 71695280 -68621485 - AluSc SINE Alu -10 299 1 279 93 0 160 chr10 71695280 71695304 -68621461 - L1MB3 LINE L1 -38 6145 6119 * 298 299 94 10 chr10 71695303 71695504 -68621261 - L1MEd LINE L1 -3819 2310 2093 198 103 0 0 chr10 71695545 71695574 -68621191 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 2279 118 0 6 chr10 71695771 71696085 -68620680 + AluSx SINE Alu 1 312 0 427 282 68 58 chr10 71696194 71696722 -68620043 - L1MEd LINE L1 -4579 1731 1145 2102 159 0 0 chr10 71696722 71697030 -68619735 - AluJb SINE Alu -4 308 1 427 282 68 58 chr10 71697030 71697230 -68619535 - L1MEd LINE L1 -5165 1145 948 1279 268 36 29 chr10 71697422 71697947 -68618818 - L1MC4a LINE L1 -351 5811 5436 1066 314 61 48 chr10 71697991 71698810 -68617955 - L1MEd LINE L1 -5271 848 19 249 204 37 0 chr10 71698818 71698872 -68617893 - L2 LINE L2 0 3313 3258 194 61 0 30 chr10 71698948 71698981 -68617784 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 820 196 0 0 chr10 71699004 71699137 -68617628 - FLAM_A SINE Alu 0 133 1 1208 198 84 55 chr10 71699389 71699733 -68617032 + MLT1A1 LTR MaLR 10 363 -2 544 286 48 32 chr10 71700071 71700260 -68616505 - MIR SINE MIR -50 212 21 477 272 50 100 chr10 71700887 71701148 -68615617 + MIR SINE MIR 1 248 -14 303 288 57 96 chr10 71702188 71702365 -68614400 + HAL1b LINE L1 1 170 -1178 348 283 11 23 chr10 71702365 71702542 -68614223 + L1M4 LINE L1 2499 2673 -3473 2391 148 16 69 chr10 71702545 71703228 -68613537 - MER4D LTR ERV1 0 903 1 640 244 77 50 chr10 71703233 71703426 -68613339 + L1M4 LINE L1 2678 2864 -3282 2035 132 22 125 chr10 71703426 71703544 -68613221 + MER57A LTR ERV1 2 131 -272 2177 129 7 0 chr10 71703544 71703846 -68612919 - AluSx SINE Alu -8 304 1 2035 132 22 125 chr10 71703846 71704175 -68612590 + MER57A LTR ERV1 131 403 0 640 244 77 50 chr10 71704175 71704345 -68612420 + L1M4 LINE L1 2864 3051 -3095 523 157 22 0 chr10 71704354 71704443 -68612322 + MER34C LTR ERV1 11 101 -484 2205 114 0 38 chr10 71704443 71704758 -68612007 - AluY SINE Alu -8 303 1 4279 153 111 46 chr10 71704772 71705811 -68610954 + MER52C LTR ERV1 1 1276 -2 2071 155 8 6 chr10 71705812 71706026 -68610739 + MER34C LTR ERV1 104 321 -264 2084 130 40 3 chr10 71706026 71706325 -68610440 - AluSx SINE Alu -2 310 1 2071 155 8 6 chr10 71706325 71706464 -68610301 + MER34C LTR ERV1 321 458 -127 2273 143 29 34 chr10 71706467 71706808 -68609957 - LTR26E LTR ERV1 -2 620 200 2540 62 3 3 chr10 71706808 71707117 -68609648 - AluY SINE Alu -2 309 1 2273 143 29 34 chr10 71707117 71707243 -68609522 - LTR26E LTR ERV1 -422 200 75 186 118 0 0 chr10 71707788 71707822 -68608943 + (A)n Simple_repeat Simple_repeat 1 34 0 623 125 0 75 chr10 71707824 71707944 -68608821 - LTR26E LTR ERV1 -511 111 1 525 157 39 10 chr10 71707944 71708038 -68608727 + MER34C LTR ERV1 456 552 -33 1744 148 54 31 chr10 71708038 71708062 -68608703 + MER4D LTR ERV1 1 23 -880 1825 153 10 52 chr10 71708062 71708369 -68608396 + AluJb SINE Alu 1 294 -18 1744 148 54 31 chr10 71708369 71708696 -68608069 + MER4D LTR ERV1 23 360 -543 * 1751 130 33 13 chr10 71708672 71708976 -68607789 + MER4D LTR ERV1 464 773 -130 1961 107 91 8 chr10 71708976 71709341 -68607424 + LTR7 LTR ERV1 1 448 -2 605 168 30 8 chr10 71709344 71709475 -68607290 + MER4D LTR ERV1 770 903 0 318 264 47 19 chr10 71709512 71709618 -68607147 + L1M4 LINE L1 3049 3157 -2989 2197 134 0 0 chr10 71709631 71709929 -68606836 + AluSx SINE Alu 13 310 -2 611 280 14 5 chr10 71709929 71710140 -68606625 + L1M4 LINE L1 3270 3482 -2664 3762 191 52 8 chr10 71710169 71710799 -68605966 - L1MB7 LINE L1 -37 6147 5448 2055 176 11 19 chr10 71710799 71711163 -68605602 - MLT1A1 LTR MaLR -4 361 1 3762 191 52 8 chr10 71711163 71711606 -68605159 - L1MB7 LINE L1 -736 5448 5026 13809 118 38 92 chr10 71711607 71712153 -68604612 + Tigger2 DNA MER2_type 1 575 -2143 1628 141 16 8 chr10 71712153 71712401 -68604364 + AluJb SINE Alu 1 250 -62 13809 118 38 92 chr10 71712401 71713013 -68603752 + Tigger2 DNA MER2_type 575 1219 -1499 10268 28 4 151 chr10 71713013 71714553 -68602212 + SVA Other Other 71 1384 -2 13809 118 38 92 chr10 71714553 71714658 -68602107 + Tigger2 DNA MER2_type 1219 1328 -1390 778 191 8 0 chr10 71714658 71714789 -68601976 + FLAM_C SINE Alu 2 133 -10 13809 118 38 92 chr10 71714789 71716155 -68600610 + Tigger2 DNA MER2_type 1328 2611 -107 1778 113 0 0 chr10 71716236 71716465 -68600300 - AluSx SINE Alu -83 229 1 358 184 66 0 chr10 71716466 71716542 -68600223 - MSTC LTR MaLR -347 81 1 * 1015 279 17 24 chr10 71716542 71716955 -68599810 - MER74A LTR ERVL -93 465 56 1518 210 103 37 chr10 71717030 71717544 -68599221 - LTR10A LTR ERV1 -61 548 1 2022 127 0 0 chr10 71717607 71717874 -68598891 - AluSx SINE Alu -45 267 1 276 213 13 13 chr10 71717874 71717949 -68598816 - L1MB7 LINE L1 -1322 4824 4750 544 217 6 102 chr10 71717958 71718144 -68598621 - AluSg/x SINE Alu 0 304 135 393 39 0 0 chr10 71718177 71718228 -68598537 + (CA)n Simple_repeat Simple_repeat 2 52 0 2573 278 113 21 chr10 71718228 71719631 -68597134 + L1M4 LINE L1 3503 5034 -1112 1853 138 73 0 chr10 71719645 71719934 -68596831 + AluJb SINE Alu 1 310 -2 313 305 7 53 chr10 71719942 71720093 -68596672 + L3 LINE CR1 1394 1537 -40 36399 86 11 8 chr10 71720189 71726321 -68590444 - L1PA6 LINE L1 0 6154 13 260 227 11 91 chr10 71726543 71726631 -68590134 + MIR SINE MIR 117 197 -65 780 254 46 2 chr10 71726966 71727182 -68589583 - MIR SINE MIR -5 257 34 232 308 50 33 chr10 71727347 71727467 -68589298 + MIR3 SINE MIR 10 131 -77 1629 53 10 0 chr10 71727579 71727785 -68588980 + L1PB1 LINE L1 5944 6151 0 455 348 7 0 chr10 71727789 71727930 -68588835 - MIR SINE MIR -91 171 30 2033 227 98 60 chr10 71727971 71728666 -68588099 - MER50 LTR ERV1 0 734 14 474 172 185 73 chr10 71729123 71729274 -68587491 + LTR40a LTR ERVL 1 168 -351 2359 165 14 0 chr10 71729299 71729651 -68587114 + LTR18A LTR ERVL 1 357 0 12466 184 10 9 chr10 71729664 71732459 -68584306 + HERVL18 LTR ERVL 8 6047 0 2487 126 47 0 chr10 71732460 71732801 -68583964 + LTR18A LTR ERVL 1 357 0 671 250 161 9 chr10 71732851 71733075 -68583690 + LTR40a LTR ERVL 262 519 0 277 125 104 0 chr10 71733076 71733124 -68583641 + HERVL40 LTR ERVL 1 53 -5477 423 0 0 0 chr10 71733245 71733292 -68583473 + (TTA)n Simple_repeat Simple_repeat 2 48 0 338 187 120 0 chr10 71733473 71733548 -68583217 + HERVL40 LTR ERVL 3784 3867 -1663 630 222 42 28 chr10 71734518 71734662 -68582103 + MIR SINE MIR 28 173 -89 2110 144 0 0 chr10 71734799 71735090 -68581675 - AluSx SINE Alu -19 293 3 3690 152 29 50 chr10 71735251 71735390 -68581375 - MER50 LTR ERV1 -30 704 564 2106 82 45 0 chr10 71735390 71735699 -68581066 + AluSx SINE Alu 1 321 0 3690 152 29 50 chr10 71735699 71735853 -68580912 - MER50 LTR ERV1 -170 564 408 2328 106 13 0 chr10 71735853 71736154 -68580611 - AluSp SINE Alu -8 305 1 3690 152 29 50 chr10 71736154 71736577 -68580188 - MER50 LTR ERV1 -326 408 1 361 326 16 0 chr10 71737249 71737378 -68579387 - L2 LINE L2 -218 3054 2924 431 305 49 12 chr10 71737379 71737543 -68579222 - MIR3 SINE MIR -8 200 31 10571 114 17 7 chr10 71738093 71738890 -68577875 + Tigger1 DNA MER2_type 5 793 -1625 1761 167 0 55 chr10 71738890 71739220 -68577545 + AluJb SINE Alu 1 312 0 10571 114 17 7 chr10 71739220 71740033 -68576732 + Tigger1 DNA MER2_type 793 1631 -787 1007 90 77 0 chr10 71740031 71740186 -68576579 - Tigger1 DNA MER2_type -82 2336 2170 * 5445 102 17 3 chr10 71740204 71740987 -68575778 + Tigger1 DNA MER2_type 1625 2418 0 2355 109 0 3 chr10 71741013 71741324 -68575441 - AluSg SINE Alu 0 310 1 3084 179 56 2 chr10 71741324 71741893 -68574872 - Tigger7 DNA MER2_type -1887 600 1 256 198 56 24 chr10 71741907 71742033 -68574732 + (TATAA)n Simple_repeat Simple_repeat 1 130 0 427 282 52 72 chr10 71742391 71742682 -68574083 + L2 LINE L2 2944 3228 -44 255 223 9 98 chr10 71742859 71742971 -68573794 + MLT1L LTR MaLR 16 117 -498 784 239 43 0 chr10 71743188 71743397 -68573368 - MER58A DNA MER1_type -1 223 6 453 235 26 129 chr10 71743403 71743488 -68573277 + L1MC5 LINE L1 7499 7591 -370 2054 139 3 0 chr10 71743488 71743776 -68572989 - AluSx SINE Alu -23 289 1 453 235 26 129 chr10 71743776 71744146 -68572619 + L1MC5 LINE L1 7591 7907 -54 2137 121 6 10 chr10 71744165 71744516 -68572249 + AluSx SINE Alu 1 350 0 2044 118 7 39 chr10 71744563 71744869 -68571896 + AluSx SINE Alu 2 297 -15 619 293 25 5 chr10 71744906 71745104 -68571661 + MLT1L LTR MaLR 343 544 -71 1732 150 50 10 chr10 71745984 71746284 -68570481 - AluJb SINE Alu 0 312 1 1014 166 27 16 chr10 71746314 71746501 -68570264 - MER5A DNA MER1_type 0 189 1 349 295 23 31 chr10 71746643 71746772 -68569993 + MIR SINE MIR 23 150 -58 2299 93 3 13 chr10 71746829 71747176 -68569589 + AluSq SINE Alu 1 313 0 372 302 69 42 chr10 71747234 71747423 -68569342 + MIR SINE MIR 14 207 -55 536 279 45 101 chr10 71747676 71748034 -68568731 - L2 LINE L2 -2 3270 2933 333 280 28 34 chr10 71748156 71748400 -68568365 + MER41B LTR ERV1 54 430 -205 6890 69 9 1 chr10 71748468 71749428 -68567337 + MER11B LTR ERVK 1 1109 -127 391 316 89 28 chr10 71749598 71749889 -68566876 - L2 LINE L2 -528 2786 2478 372 238 112 49 chr10 71750356 71750499 -68566266 + MIR3 SINE MIR 36 187 -21 219 321 0 73 chr10 71751633 71751770 -68564995 - MIR SINE MIR -63 145 19 435 88 12 38 chr10 71751770 71751850 -68564915 + (TC)n Simple_repeat Simple_repeat 2 79 0 351 0 0 0 chr10 71751850 71751889 -68564876 + (CA)n Simple_repeat Simple_repeat 1 39 0 867 195 6 35 chr10 71751957 71752126 -68564639 - AluJb SINE Alu -15 297 134 236 211 0 19 chr10 71752623 71752675 -68564090 - MIR SINE MIR -101 161 111 283 170 75 28 chr10 71753122 71753228 -68563537 + (CCCCG)n Simple_repeat Simple_repeat 4 114 0 215 271 31 10 chr10 71753883 71753979 -68562786 + (TCTCTG)n Simple_repeat Simple_repeat 3 100 0 210 37 0 0 chr10 71754006 71754033 -68562732 + (TG)n Simple_repeat Simple_repeat 1 27 0 243 300 67 0 chr10 71756003 71756093 -68560672 + MIR SINE MIR 41 136 -126 317 265 0 0 chr10 71756106 71756174 -68560591 - L2 LINE L2 -48 3224 3157 481 229 51 81 chr10 71756789 71756872 -68559893 - MER106A DNA MER1_type 0 236 152 964 193 6 0 chr10 71756872 71757043 -68559722 - FAM SINE Alu -3 172 1 481 229 51 81 chr10 71757043 71757195 -68559570 - MER106A DNA MER1_type -84 152 8 289 269 215 7 chr10 71757215 71757364 -68559401 - MER5A DNA MER1_type -3 186 7 346 240 10 58 chr10 71758080 71758184 -68558581 + MIR3 SINE MIR 74 172 -36 271 188 14 43 chr10 71758829 71758898 -68557867 - MIR SINE MIR -83 179 113 414 222 10 0 chr10 71759164 71759263 -68557502 - L2 LINE L2 -236 3036 2937 334 299 37 0 chr10 71759453 71759560 -68557205 + MIR3 SINE MIR 81 191 -17 251 324 122 38 chr10 71759703 71759916 -68556849 - L2 LINE L2 -21 3251 3021 699 158 96 6 chr10 71760679 71760856 -68555909 + L1MB8 LINE L1 5981 6173 -5 2323 83 13 16 chr10 71760858 71761170 -68555595 + AluSq SINE Alu 1 311 -2 500 255 31 37 chr10 71761277 71761438 -68555327 + MIR SINE MIR 65 224 -38 1512 112 31 27 chr10 71761455 71761679 -68555086 - AluSx SINE Alu -87 225 1 289 274 30 148 chr10 71761776 71762079 -68554686 - L2 LINE L2 -36 3236 2970 707 248 114 1 chr10 71763160 71763365 -68553400 + MIR SINE MIR 4 230 -32 762 280 104 48 chr10 71764344 71764676 -68552089 - MLT1H LTR MaLR -2 547 174 2471 151 49 7 chr10 71764676 71765087 -68551678 - MSTA LTR MaLR 0 428 1 762 280 104 48 chr10 71765087 71765272 -68551493 - MLT1H LTR MaLR -375 174 1 393 219 146 0 chr10 71765273 71765396 -68551369 + MIR SINE MIR 86 226 -36 388 256 42 89 chr10 71766243 71766434 -68550331 - MIR3 SINE MIR -26 182 1 4983 56 0 10 chr10 71767017 71767604 -68549161 - SVA Other Other 0 1386 806 389 312 105 58 chr10 71767616 71768244 -68548521 - L1MEd LINE L1 -1187 1303 780 274 228 79 20 chr10 71768463 71768564 -68548201 - MLT1L LTR MaLR 0 615 509 1025 256 30 39 chr10 71768781 71769144 -68547621 - MLT1L LTR MaLR -221 394 35 484 252 0 0 chr10 71769278 71769393 -68547372 - MLT1H LTR MaLR -430 119 5 917 92 4 96 chr10 71770189 71771250 -68545515 - SVA Other Other -548 838 622 261 0 0 0 chr10 71771250 71771279 -68545486 + (AGGGGG)n Simple_repeat Simple_repeat 5 33 0 1544 186 81 3 chr10 71772533 71772818 -68543947 + AluJo SINE Alu 6 312 0 752 192 0 0 chr10 71772878 71773003 -68543762 + FLAM_C SINE Alu 1 125 -8 2466 62 12 6 chr10 71773764 71774089 -68542676 + THE1C LTR MaLR 49 375 0 2417 203 26 20 chr10 71775012 71775550 -68541215 - L1MB7 LINE L1 -197 5987 5447 345 210 74 0 chr10 71775551 71775632 -68541133 - Tigger5 DNA MER2_type 0 2323 2237 364 217 60 0 chr10 71775640 71775723 -68541042 + Tigger5 DNA MER2_type 1 88 -2235 276 264 90 0 chr10 71775854 71776009 -68540756 - L1MB7 LINE L1 -741 5433 5265 5089 124 6 22 chr10 71776260 71777210 -68539555 + L1P LINE L1 4493 5426 -728 704 66 11 0 chr10 71777543 71777634 -68539131 + AluSg/x SINE Alu 202 293 -17 867 111 8 0 chr10 71777727 71777844 -68538921 + FLAM_C SINE Alu 1 118 -15 300 199 153 69 chr10 71778030 71778161 -68538604 - L1MCa LINE L1 -4327 2099 1958 5646 143 18 21 chr10 71778734 71779773 -68536992 - HERV9 LTR ERV1 -6478 1921 806 1977 165 8 0 chr10 71779910 71780261 -68536504 - MLT1A1-int LTR MaLR -1381 354 1 1703 201 11 47 chr10 71780264 71780628 -68536137 - MLT1A1 LTR MaLR -3 362 12 701 200 43 26 chr10 71780703 71780933 -68535832 + L1M4 LINE L1 4929 5162 -984 3314 201 73 7 chr10 71781244 71782551 -68534214 + L1M3f LINE L1 514 3964 -2364 414 178 0 0 chr10 71783076 71783149 -68533616 + MER67D LTR ERV1 87 159 -355 1390 93 5 0 chr10 71783150 71783344 -68533421 + LTR12 LTR ERV1 80 274 -440 291 265 20 0 chr10 71783348 71783446 -68533319 + LTR30 LTR ERV1 544 643 -79 1345 187 78 36 chr10 71783446 71783942 -68532823 + HERV9 LTR ERV1 1 437 -2001 3835 224 25 15 chr10 71784053 71785103 -68531662 - L1MB7 LINE L1 -1048 5098 4039 1674 224 60 50 chr10 71786708 71786768 -68529997 + MLT2B1 LTR ERVL 1 59 -461 1514 142 0 9 chr10 71786768 71787000 -68529765 - AluSg/x SINE Alu -12 300 71 1674 224 60 50 chr10 71787000 71787420 -68529345 + MLT2B1 LTR ERVL 59 486 -34 253 152 0 5 chr10 71787446 71787507 -68529258 + MLT2C2 LTR ERVL 422 464 0 409 268 167 0 chr10 71787899 71788067 -68528698 + LTR50 LTR ERVL 7 202 -593 232 270 157 0 chr10 71790379 71790494 -68526271 + L2 LINE L2 2581 2713 -601 391 323 213 13 chr10 71790557 71790867 -68525898 + L2 LINE L2 2942 3313 0 2183 107 16 7 chr10 71791963 71792272 -68524493 + AluSx SINE Alu 1 312 0 183 296 0 0 chr10 71792303 71792347 -68524418 - L3b LINE CR1 -262 1321 1278 448 274 71 18 chr10 71792775 71792943 -68523822 - MER5B DNA MER1_type -1 177 1 205 219 167 44 chr10 71793095 71793209 -68523556 - MIR3 SINE MIR -46 162 35 306 342 86 8 chr10 71793379 71793496 -68523269 - L1ME4a LINE L1 -32 6089 5964 2507 147 47 2 chr10 71793640 71794048 -68522717 - MSTB LTR MaLR 0 426 1 445 307 137 13 chr10 71794280 71794433 -68522332 - MIR SINE MIR -79 183 12 4102 167 55 30 chr10 71795097 71796024 -68520741 - L1MB7 LINE L1 -1 6183 5235 680 271 79 11 chr10 71796360 71796626 -68520139 - L2 LINE L2 -857 2457 2174 464 310 263 11 chr10 71796648 71797534 -68519231 - L2 LINE L2 -1364 1950 842 201 309 48 12 chr10 71799170 71799254 -68517511 - MIR3 SINE MIR -29 179 93 673 219 22 0 chr10 71799953 71800090 -68516675 + MIR SINE MIR 67 206 -56 356 331 31 25 chr10 71800177 71800337 -68516428 + L3 LINE CR1 1386 1546 -31 198 263 53 0 chr10 71801452 71801509 -68515256 + L2 LINE L2 2998 3057 -215 343 288 113 23 chr10 71801638 71801815 -68514950 + MARNA DNA Mariner 24 216 -370 361 200 24 47 chr10 71802055 71802140 -68514625 + L2 LINE L2 3230 3312 -1 182 200 0 117 chr10 71802143 71802203 -68514562 - L2 LINE L2 -8 3305 3253 210 143 0 0 chr10 71802234 71802269 -68514496 + (TG)n Simple_repeat Simple_repeat 1 35 0 218 149 32 64 chr10 71803291 71803356 -68513409 + MIR3 SINE MIR 103 165 -43 459 290 62 12 chr10 71803689 71803851 -68512914 + MIR SINE MIR 81 250 -12 314 241 5 0 chr10 71805086 71805302 -68511463 + (CA)n Simple_repeat Simple_repeat 1 217 0 265 225 7 7 chr10 71805335 71805477 -68511288 + (CA)n Simple_repeat Simple_repeat 2 143 0 200 279 6 0 chr10 71805520 71805692 -68511073 + (CA)n Simple_repeat Simple_repeat 2 174 0 192 243 0 0 chr10 71805769 71805843 -68510922 + (CA)n Simple_repeat Simple_repeat 1 74 0 1917 204 114 25 chr10 71806207 71806776 -68509989 - L1MB7 LINE L1 -19 6165 5546 205 290 22 25 chr10 71807002 71807094 -68509671 + MIR SINE MIR 27 122 -86 236 286 86 19 chr10 71807314 71807419 -68509346 + MER91A DNA MER1_type 1 112 -84 255 371 42 42 chr10 71807768 71808008 -68508757 + L2 LINE L2 2988 3227 -45 345 241 108 0 chr10 71808416 71808499 -68508266 + MIR SINE MIR 97 188 -74 826 255 42 9 chr10 71808526 71808742 -68508023 + MER58A DNA MER1_type 2 224 0 256 286 84 62 chr10 71808945 71809123 -68507642 - MIR SINE MIR -74 188 7 2637 62 0 0 chr10 71810244 71810548 -68506217 - AluY SINE Alu -7 304 1 339 271 47 23 chr10 71811377 71811506 -68505259 + MIR SINE MIR 61 192 -70 248 266 0 13 chr10 71811771 71811850 -68504915 - MLT1K LTR MaLR 0 588 511 247 261 0 45 chr10 71812043 71812131 -68504634 - MLT1K LTR MaLR -306 282 199 271 236 18 0 chr10 71812311 71812366 -68504399 + L2 LINE L2 3202 3257 -15 195 262 90 90 chr10 71812380 71812525 -68504240 + L2 LINE L2 3149 3293 -20 1007 224 55 10 chr10 71813135 71813425 -68503340 - LTR37A LTR ERV1 0 426 124 315 186 43 0 chr10 71814098 71814168 -68502597 - MLT1K LTR MaLR -7 581 509 192 211 88 0 chr10 71814568 71814625 -68502140 - L2 LINE L2 -63 3209 3148 1904 153 13 10 chr10 71814658 71814958 -68501807 + AluJo SINE Alu 1 301 -11 308 312 100 39 chr10 71814970 71815201 -68501564 - MIR SINE MIR -3 259 15 2348 97 10 3 chr10 71815413 71815723 -68501042 + AluSx SINE Alu 1 312 0 2036 110 16 16 chr10 71819121 71819431 -68497334 - AluSq SINE Alu -3 310 1 1559 163 23 69 chr10 71819431 71819737 -68497028 - AluJo SINE Alu -16 296 5 836 160 13 6 chr10 71819760 71819916 -68496849 + MER20 DNA MER1_type 37 193 -26 423 38 0 0 chr10 71820106 71820159 -68496606 + (CA)n Simple_repeat Simple_repeat 1 53 0 1813 160 0 20 chr10 71820159 71820453 -68496312 - AluJo SINE Alu -24 288 1 207 351 152 18 chr10 71820479 71820644 -68496121 - MIR SINE MIR -12 250 64 266 164 18 0 chr10 71821171 71821226 -68495539 + HsTC2 DNA Tc2 1843 1898 0 302 327 19 0 chr10 71821397 71821501 -68495264 + (CA)n Simple_repeat Simple_repeat 2 107 0 1389 253 72 61 chr10 71821614 71821758 -68495007 - HsTC2a DNA Tc2 -1156 744 603 2297 103 0 0 chr10 71821758 71822068 -68494697 - AluSg SINE Alu 0 310 1 1389 253 72 61 chr10 71822068 71822120 -68494645 - HsTC2a DNA Tc2 -1297 603 553 2416 80 0 6 chr10 71822120 71822432 -68494333 - AluY SINE Alu -1 310 1 1389 253 72 61 chr10 71822432 71822887 -68493878 - HsTC2a DNA Tc2 -1347 553 85 2615 160 147 124 chr10 71823299 71823627 -68493138 + L1MC3 LINE L1 6763 7082 -703 275 300 11 0 chr10 71823627 71823717 -68493048 + MLT1F1 LTR MaLR 35 125 -442 2615 160 147 124 chr10 71823717 71824298 -68492467 + L1MC3 LINE L1 7082 7784 -1 773 282 88 5 chr10 71824618 71824834 -68491931 + MIR SINE MIR 8 241 -21 287 278 153 5 chr10 71825655 71825845 -68490920 - L1M4c LINE L1 -4474 1908 1581 2337 150 11 14 chr10 71826132 71826498 -68490267 - MLT1A1 LTR MaLR 0 365 1 761 137 0 84 chr10 71828500 71828559 -68488206 - FLAM_C SINE Alu -187 125 81 2417 63 0 3 chr10 71828559 71828858 -68487907 + AluY SINE Alu 1 298 -13 761 137 0 84 chr10 71828858 71828929 -68487836 - FLAM_C SINE Alu -231 81 6 246 250 48 0 chr10 71828965 71829049 -68487716 + L1ME4a LINE L1 5866 5953 -168 292 354 20 0 chr10 71829223 71829322 -68487443 + L3 LINE CR1 1408 1508 -69 491 221 159 7 chr10 71829414 71829559 -68487206 - MER5A DNA MER1_type 0 189 23 631 311 85 13 chr10 71829772 71830007 -68486758 + MIR SINE MIR 1 252 -10 264 272 18 97 chr10 71830462 71830576 -68486189 + MIR SINE MIR 121 225 -37 202 326 33 11 chr10 71830713 71830805 -68485960 + MIR3 SINE MIR 81 174 -34 191 366 103 9 chr10 71831369 71831495 -68485270 + MIR SINE MIR 30 164 -62 263 333 20 0 chr10 71831596 71831695 -68485070 - MIR SINE MIR -72 136 36 314 204 11 0 chr10 71831804 71831892 -68484873 + (CA)n Simple_repeat Simple_repeat 2 90 0 411 294 0 8 chr10 71831917 71832043 -68484722 + (CA)n Simple_repeat Simple_repeat 2 126 0 413 235 126 0 chr10 71833641 71833760 -68483005 - L2 LINE L2 -1 3312 3179 180 0 0 0 chr10 71834556 71834576 -68482189 + (CCTG)n Simple_repeat Simple_repeat 2 21 0 371 275 46 15 chr10 71834998 71835129 -68481636 + MER5A DNA MER1_type 55 189 0 264 251 7 110 chr10 71837814 71837962 -68478803 - MIR SINE MIR -65 143 18 181 288 62 12 chr10 71838079 71838159 -68478606 + MIR SINE MIR 32 115 -147 289 173 0 0 chr10 71838524 71838576 -68478189 - MER5B DNA MER1_type 0 178 127 679 259 0 0 chr10 71838587 71838757 -68478008 + L1MB7 LINE L1 6000 6169 -15 506 182 111 0 chr10 71838770 71838869 -68477896 - MER5B DNA MER1_type -68 110 1 331 207 126 0 chr10 71839019 71839106 -68477659 - MIR SINE MIR -118 144 47 259 279 97 39 chr10 71839381 71839524 -68477241 - MIR SINE MIR -61 147 18 206 300 24 118 chr10 71840515 71840685 -68476080 - L3 LINE CR1 -91 1486 1333 274 305 95 0 chr10 71840819 71840914 -68475851 + MIR SINE MIR 150 253 -9 192 330 54 54 chr10 71840919 71841031 -68475734 - MIR SINE MIR -1 261 150 305 283 114 66 chr10 71841126 71841292 -68475473 - MIR SINE MIR -76 186 13 607 285 62 11 chr10 71842051 71842230 -68474535 + MER91B DNA MER1_type 3 190 0 360 275 160 0 chr10 71842808 71842939 -68473826 - L3 LINE CR1 -2 1575 1424 852 186 49 130 chr10 71843728 71844013 -68472752 + MIR SINE MIR 1 262 0 324 293 42 31 chr10 71844013 71844187 -68472578 - MIR SINE MIR -65 197 16 212 288 0 25 chr10 71845650 71845730 -68471035 + GA-rich Low_complexity Low_complexity 5 82 0 357 300 40 60 chr10 71845768 71845918 -68470847 - MIR SINE MIR -56 206 60 1123 231 153 48 chr10 71846388 71846885 -68469880 - MLT1H LTR MaLR 0 549 1 722 164 40 13 chr10 71847104 71847256 -68469509 + L1MB7 LINE L1 5927 6082 -102 1179 146 0 30 chr10 71847273 71847472 -68469293 + AluJb SINE Alu 1 193 -119 355 148 0 0 chr10 71847495 71847549 -68469216 + L1MB8 LINE L1 6107 6160 -18 296 310 33 54 chr10 71847952 71848136 -68468629 - MIR3 SINE MIR -27 181 2 246 283 0 0 chr10 71848603 71848663 -68468102 + (TG)n Simple_repeat Simple_repeat 2 61 0 299 298 179 18 chr10 71848820 71848988 -68467777 - MIR SINE MIR -29 233 39 303 332 166 5 chr10 71849315 71849502 -68467263 + MIR SINE MIR 45 261 -1 392 245 295 22 chr10 71850045 71850184 -68466581 - MIR SINE MIR -85 177 1 329 331 41 49 chr10 71850195 71850356 -68466409 - L2 LINE L2 -192 3080 2920 261 0 0 0 chr10 71850356 71850385 -68466380 + (TG)n Simple_repeat Simple_repeat 1 29 0 329 331 41 49 chr10 71850385 71850489 -68466276 - L2 LINE L2 -352 2920 2817 1938 187 31 9 chr10 71851437 71851859 -68464906 + L1M4 LINE L1 4832 5262 -884 208 222 206 0 chr10 71851864 71851927 -68464838 - L2 LINE L2 -17 3296 3221 234 286 38 38 chr10 71854132 71854237 -68462528 + L2 LINE L2 3205 3309 -4 216 211 39 0 chr10 71854247 71854299 -68462466 - MIR SINE MIR -128 134 81 233 277 99 10 chr10 71854303 71854404 -68462361 - MIR SINE MIR -93 169 60 254 303 41 41 chr10 71854903 71855025 -68461740 - MIR SINE MIR -27 235 114 * 525 327 48 47 chr10 71855024 71855599 -68461166 - L2 LINE L2 0 3272 2641 1824 135 0 91 chr10 71855746 71856087 -68460678 + AluJo SINE Alu 1 310 -2 1077 169 9 58 chr10 71856139 71856310 -68460455 + L1MB3 LINE L1 5970 6129 -54 2283 90 0 13 chr10 71856310 71856611 -68460154 + AluSq SINE Alu 1 297 -16 1077 169 9 58 chr10 71856611 71856664 -68460101 + L1MB3 LINE L1 6129 6183 0 293 302 34 20 chr10 71856685 71856834 -68459931 + L1ME LINE L1 5709 5859 -303 2495 179 26 7 chr10 71857206 71857658 -68459107 - MER65C LTR ERV1 0 461 1 249 318 36 55 chr10 71858109 71858219 -68458546 - MIR3 SINE MIR -1 207 100 239 197 254 0 chr10 71859118 71859189 -68457576 + MIR SINE MIR 61 149 -59 417 274 123 1 chr10 71859199 71859463 -68457302 + MER46C DNA MER2_type 3 334 -4 246 176 0 59 chr10 71859601 71859652 -68457113 - L2 LINE L2 0 3272 3225 342 264 47 31 chr10 71859761 71859890 -68456875 + MIR3 SINE MIR 78 208 0 222 220 0 0 chr10 71860061 71860120 -68456645 + CT-rich Low_complexity Low_complexity 2 60 0 488 301 119 5 chr10 71860227 71860420 -68456345 - MIR SINE MIR -16 246 32 748 217 39 11 chr10 71860714 71860894 -68455871 - MER5A DNA MER1_type -4 185 1 1538 158 90 11 chr10 71863498 71863777 -68452988 + AluJo SINE Alu 5 305 -7 2246 89 10 0 chr10 71865517 71865810 -68450955 - AluSp SINE Alu -17 296 1 258 277 0 0 chr10 71865816 71865881 -68450884 - L1ME LINE L1 -299 5822 5758 759 102 0 17 chr10 71865881 71865999 -68450766 + MSTA LTR MaLR 313 428 0 9801 136 15 37 chr10 71866001 71867614 -68449151 + MSTA-int LTR MaLR 3 1580 0 2010 140 178 6 chr10 71867614 71867979 -68448786 + MSTA LTR MaLR 1 428 0 1748 142 56 4 chr10 71868059 71868327 -68448438 + AluJo SINE Alu 1 385 0 768 48 19 0 chr10 71868327 71868430 -68448335 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 194 268 61 61 chr10 71868497 71868579 -68448186 + MIR SINE MIR 13 94 -168 2531 158 7 28 chr10 71868601 71868771 -68447994 + L1MB3 LINE L1 5665 5837 -346 2318 101 13 0 chr10 71868771 71869077 -68447688 + AluSq SINE Alu 1 310 -3 2531 158 7 28 chr10 71869077 71869413 -68447352 + L1MB3 LINE L1 5837 6155 -28 270 260 49 65 chr10 71869590 71869656 -68447109 - MLT1K LTR MaLR -329 259 194 1898 174 45 126 chr10 71869656 71870322 -68446443 + LTR9 LTR ERV1 1 612 0 270 260 49 65 chr10 71870322 71870378 -68446387 - MLT1K LTR MaLR -394 194 139 234 0 0 0 chr10 71871153 71871179 -68445586 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2133 126 0 0 chr10 71871181 71871467 -68445298 - AluSx SINE Alu -26 286 1 409 221 133 3 chr10 71871467 71871566 -68445199 + MIR SINE MIR 18 117 -97 271 291 203 15 chr10 71872493 71872819 -68443946 + L2 LINE L2 2530 2916 -398 478 217 111 62 chr10 71872894 71873120 -68443645 + L2 LINE L2 3077 3313 0 298 303 142 13 chr10 71874159 71874314 -68442451 + MER5B DNA MER1_type 1 175 -3 * 468 312 91 16 chr10 71874314 71874486 -68442279 + MIR SINE MIR 43 228 -34 190 310 42 0 chr10 71876211 71876282 -68440483 - MIR SINE MIR -81 181 108 281 326 76 22 chr10 71877612 71877796 -68438969 - MIR3 SINE MIR -3 205 12 393 300 16 10 chr10 71878817 71878965 -68437800 - MIR SINE MIR -60 148 29 357 294 62 25 chr10 71880850 71881010 -68435755 - MIR3 SINE MIR -13 195 30 1000 275 109 29 chr10 71881349 71881862 -68434903 + L2 LINE L2 1985 2538 -776 2368 187 15 8 chr10 71881964 71882435 -68434330 - MER84 LTR ERVI -33 474 1 474 113 25 25 chr10 71882438 71882518 -68434247 - MER84 LTR ERVI -427 80 1 13878 82 26 13 chr10 71882518 71884493 -68432272 - MER84-int LTR ERV1 0 4954 2954 739 205 13 0 chr10 71884923 71885074 -68431691 - MER84-int LTR ERV1 -1984 2970 2818 8117 105 11 22 chr10 71885186 71886430 -68430335 - MER84-int LTR ERV1 -2489 2465 1236 6670 153 15 2 chr10 71886432 71887647 -68429118 - L1P LINE L1 -2638 3508 2278 1757 102 4 0 chr10 71887647 71887872 -68428893 + AluSg/x SINE Alu 75 300 -12 2218 239 60 11 chr10 71887873 71888438 -68428327 - L1PA12 LINE L1 -6270 1311 719 9180 249 36 16 chr10 71888561 71889631 -68427134 + L1MDa LINE L1 2077 3124 -3416 1921 163 7 13 chr10 71889631 71889938 -68426827 + AluJb SINE Alu 5 309 -3 9180 249 36 16 chr10 71889938 71890142 -68426623 + L1MDa LINE L1 3124 3322 -3218 2141 117 0 26 chr10 71890142 71890449 -68426316 + AluSg1 SINE Alu 1 299 -10 9180 249 36 16 chr10 71890449 71891593 -68425172 + L1MDa LINE L1 3322 4442 -2098 180 0 0 0 chr10 71891593 71891613 -68425152 + (GAAA)n Simple_repeat Simple_repeat 1 20 0 9180 249 36 16 chr10 71891613 71892634 -68424131 + L1MDa LINE L1 4442 5652 -888 332 191 15 0 chr10 71892658 71892726 -68424039 + MIR SINE MIR 180 248 -14 280 314 23 0 chr10 71893577 71893663 -68423102 - MIR SINE MIR -87 175 88 273 317 81 16 chr10 71893714 71893837 -68422928 - MIR SINE MIR 0 262 132 766 269 0 21 chr10 71893867 71894060 -68422705 - MIR SINE MIR -27 235 47 518 303 29 45 chr10 71894974 71895218 -68421547 - MER112 DNA MER1_type -20 240 1 226 275 150 66 chr10 71895355 71895522 -68421243 + MIR3 SINE MIR 21 201 -7 24 32 0 0 chr10 71895656 71895687 -68421078 + AT_rich Low_complexity Low_complexity 1 31 0 1220 266 37 11 chr10 71896196 71896550 -68420215 - L1ME3A LINE L1 -304 5866 5504 730 299 191 18 chr10 71898541 71898933 -68417832 - L2 LINE L2 0 3313 2854 2860 221 94 20 chr10 71899045 71899356 -68417409 - L1PA12 LINE L1 -6790 791 504 2935 123 83 83 chr10 71899356 71899968 -68416797 + LTR9 LTR ERV1 1 612 0 2860 221 94 20 chr10 71899968 71900386 -68416379 - L1PA12 LINE L1 -7077 504 8 8125 107 16 4 chr10 71900395 71901436 -68415329 - MER84-int LTR ERV1 -3709 1245 187 2432 89 3 6 chr10 71901436 71901750 -68415015 + AluSq SINE Alu 1 313 0 8125 107 16 4 chr10 71901750 71901876 -68414889 - MER84-int LTR ERV1 -4767 187 64 754 171 16 0 chr10 71901878 71902007 -68414758 + AluSq/x SINE Alu 2 132 -181 417 90 0 15 chr10 71902015 71902082 -68414683 - MER84-int LTR ERV1 -4888 66 1 3130 121 28 20 chr10 71902082 71902585 -68414180 - MER84 LTR ERV1 0 507 1 2708 167 82 47 chr10 71902585 71903338 -68413427 - L1MDa LINE L1 -4649 1891 1112 299 200 203 112 chr10 71903310 71903675 -68413090 - L1M4 LINE L1 -2713 3827 3430 * 2174 119 0 3 chr10 71903749 71904044 -68412721 - AluY SINE Alu -17 294 1 414 140 193 0 chr10 71904044 71904158 -68412607 - L1MC/D LINE L1 -2373 5435 5300 625 265 42 33 chr10 71904386 71904601 -68412164 + MIR SINE MIR 20 236 -26 267 279 0 15 chr10 71905259 71905327 -68411438 + L2 LINE L2 3175 3241 -72 259 196 0 0 chr10 71905339 71905395 -68411370 + L1ME3A LINE L1 6054 6109 -61 819 286 62 31 chr10 71905458 71905783 -68410982 - L3 LINE CR1 -39 1538 1204 210 365 45 37 chr10 71905842 71906086 -68410679 - L2 LINE L2 -131 3141 2896 2485 180 59 7 chr10 71907236 71907680 -68409085 - MLT1C LTR MaLR 0 467 1 221 368 73 7 chr10 71908061 71908197 -68408568 + L2 LINE L2 2659 2803 -511 465 225 16 23 chr10 71908258 71908387 -68408378 + L1ME3A LINE L1 6037 6164 -6 231 143 54 18 chr10 71909093 71909149 -68407616 + Charlie8 DNA MER1_type 91 148 -2269 1626 158 75 4 chr10 71909185 71909477 -68407288 + AluSx SINE Alu 2 312 0 557 256 52 65 chr10 71909507 71909737 -68407028 + L2 LINE L2 3084 3310 -3 259 312 110 0 chr10 71910532 71910641 -68406124 - MIR3 SINE MIR -7 201 81 239 272 120 11 chr10 71910814 71910906 -68405859 - MER5A DNA MER1_type -50 139 38 282 287 19 37 chr10 71911030 71911138 -68405627 + MER20B DNA MER1_type 6 111 -672 758 301 55 63 chr10 71911254 71911398 -68405367 + MER20B DNA MER1_type 154 298 -485 2050 103 59 0 chr10 71911398 71911711 -68405054 + AluSx SINE Alu 3 312 0 758 301 55 63 chr10 71911711 71912201 -68404564 + MER20B DNA MER1_type 298 783 0 769 133 71 0 chr10 71912470 71912583 -68404182 + FLAM_C SINE Alu 2 122 -21 204 40 0 0 chr10 71912584 71912609 -68404156 + (TAA)n Simple_repeat Simple_repeat 1 25 0 320 316 76 32 chr10 71912609 71912767 -68403998 - MIR SINE MIR -16 246 82 1874 139 78 36 chr10 71912974 71913334 -68403431 - THE1C LTR MaLR 0 375 1 977 189 0 6 chr10 71914257 71914432 -68402333 + FAM SINE Alu 2 175 0 636 196 165 13 chr10 71914465 71914623 -68402142 - MER5A DNA MER1_type -1 188 7 354 45 0 0 chr10 71914732 71914776 -68401989 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 414 0 0 0 chr10 71914775 71914821 -68401944 + (CA)n Simple_repeat Simple_repeat 1 46 0 307 271 99 53 chr10 71914852 71915003 -68401762 + MIR3 SINE MIR 45 202 -6 272 306 62 38 chr10 71915079 71915239 -68401526 + MIR SINE MIR 65 228 -34 777 188 0 8 chr10 71916086 71916219 -68400546 - FLAM_C SINE Alu 0 133 2 336 262 42 24 chr10 71916974 71917142 -68399623 + G-rich Low_complexity Low_complexity 5 175 0 26 30 0 0 chr10 71917170 71917203 -68399562 + GC_rich Low_complexity Low_complexity 1 33 0 2247 81 3 0 chr10 71917864 71918178 -68398587 - AluSx SINE Alu 0 315 1 909 213 6 11 chr10 71918287 71918461 -68398304 - FAM SINE Alu -2 173 1 313 360 27 20 chr10 71918558 71918705 -68398060 + L2 LINE L2 3117 3264 -8 2105 120 3 13 chr10 71918949 71919283 -68397482 - AluSq SINE Alu 0 331 1 180 0 0 0 chr10 71919285 71919305 -68397460 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 189 250 0 0 chr10 71920441 71920477 -68396288 - L3 LINE CR1 -10 1567 1532 1325 167 0 19 chr10 71920487 71920703 -68396062 - AluJb SINE Alu -9 303 92 239 250 0 0 chr10 71920803 71920851 -68395914 - AluJ/monomer SINE Alu -254 48 1 183 326 0 0 chr10 71920869 71920918 -68395847 - L3 LINE CR1 -66 1511 1463 476 272 243 0 chr10 71920998 71921200 -68395565 - MIR SINE MIR -2 260 10 25 0 0 0 chr10 71921370 71921395 -68395370 + AT_rich Low_complexity Low_complexity 1 25 0 2054 143 7 0 chr10 71921406 71921699 -68395066 + AluSx SINE Alu 1 295 -17 525 194 42 24 chr10 71921705 71921870 -68394895 + MER20B DNA MER1_type 615 782 -1 1144 181 54 0 chr10 71922428 71922632 -68394133 + MER20 DNA MER1_type 1 215 -4 271 237 82 21 chr10 71923614 71923711 -68393054 - LTR33 LTR ERVL -66 455 353 218 196 0 0 chr10 71924054 71924100 -68392665 + CT-rich Low_complexity Low_complexity 1 46 0 192 97 0 0 chr10 71924593 71924624 -68392141 + (TA)n Simple_repeat Simple_repeat 1 31 0 1199 61 7 0 chr10 71925868 71926016 -68390749 - AluSg/x SINE Alu -5 307 159 615 295 29 10 chr10 71926102 71926309 -68390456 - LTR33 LTR ERVL -288 233 23 277 234 266 38 chr10 71926534 71926692 -68390073 - L3 LINE CR1 -11 1566 1373 2050 110 10 14 chr10 71926809 71927099 -68389666 + AluSx SINE Alu 1 289 -23 489 97 43 11 chr10 71927100 71927193 -68389572 + (CAATA)n Simple_repeat Simple_repeat 4 99 0 210 91 0 0 chr10 71927195 71927228 -68389537 + (CATTC)n Simple_repeat Simple_repeat 1 33 0 298 285 57 25 chr10 71927247 71927405 -68389360 - MLT1J LTR MaLR -139 372 210 1076 292 63 17 chr10 71927652 71928308 -68388457 - L1ME3A LINE L1 -216 5954 5265 1248 219 151 5 chr10 71928589 71929099 -68387666 - L1ME3 LINE L1 0 6162 5542 729 223 0 43 chr10 71929217 71929401 -68387364 - FRAM SINE Alu 0 176 1 345 213 53 163 chr10 71930391 71930652 -68386113 - MIR SINE MIR -10 252 21 26 0 0 0 chr10 71931004 71931030 -68385735 + AT_rich Low_complexity Low_complexity 1 26 0 1231 150 78 36 chr10 71931120 71931426 -68385339 - L1MB8 LINE L1 -51 6127 5809 1300 204 72 16 chr10 71931720 71932108 -68384657 - LTR37A LTR ERV1 0 426 17 4157 155 67 43 chr10 71932125 71933003 -68383762 - MER21A LTR ERV1 -32 899 1 22 0 0 0 chr10 71933061 71933083 -68383682 + AT_rich Low_complexity Low_complexity 1 22 0 344 214 34 34 chr10 71935319 71935408 -68381357 + MIR3 SINE MIR 113 201 -7 236 297 141 14 chr10 71935723 71935836 -68380929 + MIR SINE MIR 1 140 -68 2525 63 3 0 chr10 71936368 71936670 -68380095 + AluY SINE Alu 1 303 -8 371 235 24 21 chr10 71937280 71937388 -68379377 + MIR SINE MIR 34 144 -64 269 167 22 44 chr10 71937401 71937491 -68379274 + CT-rich Low_complexity Low_complexity 3 90 0 1532 142 7 80 chr10 71937495 71937783 -68378982 - AluJo SINE Alu -24 288 22 67 14 0 0 chr10 71937906 71937980 -68378785 + AT_rich Low_complexity Low_complexity 1 74 0 2264 113 0 0 chr10 71937997 71938290 -68378475 - AluSx SINE Alu -19 293 1 263 200 18 0 chr10 71938462 71938517 -68378248 + L2 LINE L2 3257 3312 -1 1540 203 89 16 chr10 71938657 71939026 -68377739 - MSTD LTR MaLR 0 396 1 410 222 141 45 chr10 71939589 71939787 -68376978 - MER112 DNA MER1_type -6 254 38 187 333 0 37 chr10 71940467 71940521 -68376244 - MIR SINE MIR -87 121 70 1288 91 30 25 chr10 71940716 71940914 -68375851 + MER30 DNA MER1_type 1 199 -31 456 298 76 18 chr10 71941104 71941275 -68375490 + MIR3 SINE MIR 20 200 -8 1734 172 16 63 chr10 71942235 71942618 -68374147 - MLT1A1 LTR MaLR 0 365 1 689 299 63 15 chr10 71942944 71943279 -68373486 - L1MC4a LINE L1 -1914 5894 5544 2129 151 107 8 chr10 71943316 71943700 -68373065 - MSTB LTR MaLR -4 422 1 384 313 0 0 chr10 71943802 71943901 -68372864 - L2 LINE L2 -22 3291 3193 229 331 92 35 chr10 71944183 71944325 -68372440 + L2 LINE L2 3123 3272 0 1024 249 74 28 chr10 71944664 71944990 -68371775 + MER58B DNA MER1_type 1 341 0 2263 85 0 0 chr10 71945637 71945949 -68370816 - AluSc SINE Alu 0 312 1 287 247 59 24 chr10 71946280 71946365 -68370400 - L2 LINE L2 -25 3247 3160 861 159 48 48 chr10 71947331 71947539 -68369226 - L1MB3 LINE L1 -8 6175 5968 723 113 30 0 chr10 71947686 71947819 -68368946 - L1MA8 LINE L1 -8 6283 6147 2352 105 0 3 chr10 71948047 71948360 -68368405 - AluSx SINE Alu 0 312 1 305 242 48 48 chr10 71949041 71949165 -68367600 + MIR SINE MIR 67 190 -72 1189 136 96 18 chr10 71949255 71949366 -68367399 - L1MA8 LINE L1 -2 6289 6188 2520 78 3 0 chr10 71949366 71949675 -68367090 - AluSg SINE Alu 0 310 1 1189 136 96 18 chr10 71949675 71949843 -68366922 - L1MA8 LINE L1 -103 6188 5988 233 332 65 60 chr10 71950755 71950954 -68365811 + MIR SINE MIR 2 201 -61 824 143 0 0 chr10 71951096 71951229 -68365536 - FLAM_C SINE Alu 0 133 1 1037 223 81 48 chr10 71951413 71951785 -68364980 + L1MC4a LINE L1 5609 5992 -1816 26 30 0 0 chr10 71951904 71951937 -68364828 + AT_rich Low_complexity Low_complexity 1 33 0 863 170 5 98 chr10 71952215 71952439 -68364326 + MER20 DNA MER1_type 17 219 0 803 224 67 9 chr10 71952604 71952814 -68363951 - MER58A DNA MER1_type 0 224 3 273 163 0 0 chr10 71953612 71953661 -68363104 + (TG)n Simple_repeat Simple_repeat 2 50 0 781 276 28 9 chr10 71953672 71953889 -68362876 - L2 LINE L2 0 3313 3093 2175 122 0 13 chr10 71955084 71955388 -68361377 - AluSx SINE Alu -12 300 1 906 222 73 36 chr10 71956318 71956566 -68360199 + MIR SINE MIR 6 262 0 291 107 214 24 chr10 71956624 71956708 -68360057 - L1MD3 LINE L1 0 7995 7896 271 127 55 0 chr10 71956852 71956907 -68359858 - L1MD3 LINE L1 -206 7789 7732 2146 135 0 3 chr10 71956922 71957218 -68359547 - AluSx SINE Alu -17 295 1 1837 185 0 6 chr10 71959047 71959360 -68357405 - AluJb SINE Alu -1 311 1 226 229 82 0 chr10 71959370 71959431 -68357334 + MIR3 SINE MIR 111 176 -32 257 346 22 44 chr10 71959513 71959649 -68357116 + L2 LINE L2 2725 2857 -457 189 250 0 0 chr10 71959867 71959903 -68356862 - L2 LINE L2 -27 3245 3210 * 496 294 108 19 chr10 71959873 71960087 -68356678 - MIR SINE MIR -27 235 3 55 0 0 0 chr10 71960478 71960533 -68356232 + AT_rich Low_complexity Low_complexity 1 55 0 759 262 10 0 chr10 71961638 71961844 -68354921 + L1ME LINE L1 5574 5781 -381 511 131 4 186 chr10 71961866 71962102 -68354663 - L1MC5 LINE L1 -1041 6920 6728 326 208 20 81 chr10 71962150 71962299 -68354466 + L1MEd LINE L1 1011 1150 -4969 3958 111 85 103 chr10 71962423 71963870 -68352895 + pTR5 LTR ERV1 66 2438 0 1982 150 0 7 chr10 71963943 71964249 -68352516 - AluJb SINE Alu -8 304 1 198 0 0 0 chr10 71964252 71964274 -68352491 + (T)n Simple_repeat Simple_repeat 1 22 0 503 275 79 79 chr10 71964322 71964777 -68351988 - L1MEd LINE L1 -5273 846 392 240 269 236 6 chr10 71965135 71965317 -68351448 - L3 LINE CR1 -295 1282 1059 1914 165 0 0 chr10 71967070 71967373 -68349392 + AluJb SINE Alu 3 305 -7 237 286 0 16 chr10 71967979 71968042 -68348723 + MIR SINE MIR 83 144 -64 23 0 0 0 chr10 71968149 71968172 -68348593 + AT_rich Low_complexity Low_complexity 1 23 0 2171 118 3 0 chr10 71968244 71968541 -68348224 + AluSx SINE Alu 1 298 -14 376 301 78 0 chr10 71968544 71968647 -68348118 - L2 LINE L2 -23 3249 3139 2039 132 0 33 chr10 71971180 71971484 -68345281 + AluJb SINE Alu 3 296 -16 215 345 94 35 chr10 71971601 71971787 -68344978 - MIR SINE MIR -68 140 5 895 199 74 0 chr10 71974861 71975037 -68341728 - MER5A DNA MER1_type 0 189 1 1740 158 0 50 chr10 71975262 71975405 -68341360 + AluJo SINE Alu 1 150 -159 2456 81 7 0 chr10 71975405 71975714 -68341051 + AluSp SINE Alu 1 311 -2 1740 158 0 50 chr10 71975714 71975894 -68340871 + AluJo SINE Alu 150 309 0 198 311 0 33 chr10 71976199 71976260 -68340505 - MIR3 SINE MIR -48 160 102 188 139 0 56 chr10 71977376 71977412 -68339353 + L3 LINE CR1 1468 1501 -76 200 279 44 96 chr10 71977692 71977828 -68338937 + MIR SINE MIR 84 212 -50 2261 82 9 38 chr10 71978770 71979086 -68337679 - AluSq SINE Alu -6 307 1 225 0 0 0 chr10 71980341 71980366 -68336399 + (TG)n Simple_repeat Simple_repeat 2 26 0 1758 169 7 7 chr10 71982220 71982499 -68334266 - AluJb SINE Alu -19 293 15 1651 226 88 20 chr10 71983275 71983762 -68333003 - MLT2B1 LTR ERVL 0 520 1 1261 130 93 0 chr10 71983778 71983993 -68332772 - MER46A DNA MER2_type -1 235 1 184 260 94 94 chr10 71984328 71984424 -68332341 + L2 LINE L2 3208 3303 -10 2132 71 0 4 chr10 71985441 71985707 -68331058 - AluY SINE Alu -9 302 38 319 348 62 6 chr10 71985755 71985933 -68330832 - L1ME LINE L1 -550 5571 5384 180 191 48 0 chr10 71987394 71987436 -68329329 - MIR SINE MIR -70 138 95 189 0 0 0 chr10 71988881 71988902 -68327863 + (CCCCCG)n Simple_repeat Simple_repeat 3 23 0 29 70 0 0 chr10 71989532 71989589 -68327176 + GC_rich Low_complexity Low_complexity 1 57 0 180 170 43 0 chr10 71989726 71989773 -68326992 + MIR SINE MIR 48 96 -166 2496 235 101 29 chr10 71989804 71991169 -68325596 - L1ME1 LINE L1 -2 6164 4693 436 340 77 72 chr10 71991175 71991537 -68325228 - L1ME2 LINE L1 -220 5944 5709 245 252 2 37 chr10 71991639 71991735 -68325030 + L1ME LINE L1 5579 5652 -514 351 240 0 13 chr10 71991882 71991957 -68324808 - LTR28 LTR ERV1 0 1020 947 2692 189 68 25 chr10 71992007 71992807 -68323958 - LTR28 LTR ERV1 -70 950 1 318 288 50 50 chr10 71992810 71993281 -68323484 - L1ME2 LINE L1 -738 5432 4961 511 247 6 57 chr10 71993283 71993414 -68323351 + MLT1F LTR MaLR 8 131 -411 1448 162 94 4 chr10 71993414 71993680 -68323085 - AluJo SINE Alu -22 290 1 511 247 6 57 chr10 71993680 71993706 -68323059 + MLT1F LTR MaLR 131 157 -385 548 210 215 5 chr10 71993730 71993925 -68322840 + MLT1F LTR MaLR 304 539 -3 1492 287 99 31 chr10 71994057 71994856 -68321909 + L1MCc LINE L1 24 876 -5547 577 271 20 23 chr10 71994932 71995128 -68321637 + L1ME3A LINE L1 5378 5566 -600 870 233 125 8 chr10 71995191 71995431 -68321334 - MLT1C LTR MaLR 0 467 200 474 196 133 95 chr10 71995675 71996036 -68320729 + L1ME3A LINE L1 5557 5735 -435 2218 104 0 0 chr10 71996036 71996316 -68320449 - AluSq SINE Alu -33 280 1 474 196 133 95 chr10 71996316 71996765 -68320000 + L1ME3A LINE L1 5735 6165 -5 729 281 167 36 chr10 71997689 71998049 -68318716 - MLT1I LTR MaLR -2 407 1 2769 242 147 42 chr10 71998347 71998883 -68317882 - MER69B DNA AcHobo -1300 1226 748 1850 166 0 0 chr10 71998883 71999160 -68317605 + AluSx SINE Alu 23 299 -13 2769 242 147 42 chr10 71999160 71999732 -68317033 - MER69B DNA AcHobo -1778 748 1 670 268 31 5 chr10 72000228 72000422 -68316343 + MIR SINE MIR 25 223 -39 633 304 128 4 chr10 72000453 72000726 -68316039 + LTR16C LTR ERVL 71 377 -114 1276 299 74 41 chr10 72000747 72001789 -68314976 - L1M4 LINE L1 -824 5322 4247 317 270 77 51 chr10 72001790 72001986 -68314779 + L3 LINE CR1 1373 1573 -4 197 62 0 31 chr10 72002051 72002083 -68314682 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 746 211 77 34 chr10 72002794 72003002 -68313763 + MER20 DNA MER1_type 3 219 0 1265 165 33 80 chr10 72003011 72003087 -68313678 - Charlie5 DNA MER1_type -1 2623 2545 2249 99 7 0 chr10 72003087 72003379 -68313386 - AluSp SINE Alu -19 294 1 1265 165 33 80 chr10 72003379 72003666 -68313099 - Charlie5 DNA MER1_type -79 2545 2277 566 213 16 0 chr10 72003679 72003806 -68312959 - MER3 DNA MER1_type -87 122 41 496 258 103 26 chr10 72005140 72005373 -68311392 - L1MC5 LINE L1 -49 7912 7662 2252 80 59 0 chr10 72005387 72005676 -68311089 - AluY SINE Alu -5 306 1 461 253 130 0 chr10 72005905 72006067 -68310698 - MIR SINE MIR -16 246 64 270 254 132 0 chr10 72006734 72006848 -68309917 - MIR SINE MIR -63 145 17 191 322 0 35 chr10 72006993 72007080 -68309685 - MIR3 SINE MIR -21 187 104 448 190 82 23 chr10 72007376 72007512 -68309253 + MIR SINE MIR 15 121 -87 258 342 0 0 chr10 72007613 72007689 -68309076 + MIR SINE MIR 48 123 -85 194 319 42 34 chr10 72008031 72008150 -68308615 - MIR3 SINE MIR -74 134 15 * 226 318 16 40 chr10 72008081 72008207 -68308558 + MIR3 SINE MIR 12 134 -74 389 281 62 0 chr10 72009257 72009417 -68307348 + MLT1K LTR MaLR 2 171 -417 599 264 141 22 chr10 72009445 72009721 -68307044 + MLT1K LTR MaLR 274 582 -6 293 290 74 34 chr10 72009780 72009956 -68306809 + L2 LINE L2 2192 2374 -940 330 96 41 0 chr10 72009988 72010061 -68306704 + CT-rich Low_complexity Low_complexity 2 77 0 360 0 0 0 chr10 72010095 72010135 -68306630 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 299 190 63 13 chr10 72010190 72010269 -68306496 - MIR SINE MIR 0 262 180 405 229 176 0 chr10 72010300 72010431 -68306334 - MIR SINE MIR -53 209 56 243 350 21 0 chr10 72010726 72010823 -68305942 + L2 LINE L2 3169 3267 -5 2515 134 37 0 chr10 72011209 72011613 -68305152 - MSTB LTR MaLR 0 426 8 456 256 128 29 chr10 72012066 72012378 -68304387 + LTR16B LTR ERVL 54 396 -68 324 319 110 6 chr10 72012746 72012909 -68303856 - MIR3 SINE MIR -15 193 14 2806 69 5 8 chr10 72013168 72013543 -68303222 - THE1C LTR MaLR 0 375 2 325 297 165 6 chr10 72013761 72013943 -68302822 + MIR SINE MIR 20 230 -32 302 324 15 0 chr10 72014187 72014399 -68302366 + GA-rich Low_complexity Low_complexity 1 215 0 372 77 0 0 chr10 72014432 72014484 -68302281 + (GA)n Simple_repeat Simple_repeat 1 52 0 306 284 45 22 chr10 72015523 72015657 -68301108 + MIR3 SINE MIR 46 182 -26 268 325 48 8 chr10 72015820 72015946 -68300819 - MIR3 SINE MIR -37 171 41 201 351 105 9 chr10 72016708 72016822 -68299943 + L2 LINE L2 2937 3061 -211 228 269 143 17 chr10 72016864 72016983 -68299782 + MER117 DNA MER1_type 30 163 -34 237 282 35 12 chr10 72017520 72017605 -68299160 - MIR SINE MIR -107 155 69 288 345 0 0 chr10 72017713 72017829 -68298936 - MIR3 SINE MIR -12 196 81 189 107 0 0 chr10 72018235 72018263 -68298502 + (TCC)n Simple_repeat Simple_repeat 2 29 0 210 328 90 30 chr10 72019187 72019321 -68297444 - MIR SINE MIR -78 184 43 191 205 0 0 chr10 72020663 72020702 -68296063 + MIR SINE MIR 108 146 -116 201 329 13 25 chr10 72020921 72021000 -68295765 - L3 LINE CR1 -74 1503 1426 252 159 0 0 chr10 72021023 72021067 -68295698 + MIR SINE MIR 109 152 -110 2144 107 7 0 chr10 72021076 72021357 -68295408 + AluSq SINE Alu 5 287 -26 194 207 35 52 chr10 72021765 72021823 -68294942 + L2 LINE L2 2613 2669 -645 2761 263 11 22 chr10 72021881 72022782 -68293983 - L1ME3 LINE L1 -13 6149 5259 232 298 99 41 chr10 72022885 72023006 -68293759 + L2 LINE L2 2924 3051 -221 256 306 0 0 chr10 72023208 72023280 -68293485 - MER94 DNA DNA -11 123 52 371 325 57 19 chr10 72023312 72023508 -68293257 + MIR SINE MIR 4 202 -60 1472 162 44 14 chr10 72023758 72024054 -68292711 - L1MA9 LINE L1 0 6312 6008 30 27 0 0 chr10 72024057 72024094 -68292671 + AT_rich Low_complexity Low_complexity 1 37 0 897 178 0 44 chr10 72024094 72024260 -68292505 - AluJb SINE Alu -18 294 135 2270 94 3 0 chr10 72024260 72024559 -68292206 - AluSp SINE Alu -13 300 1 897 178 0 44 chr10 72024559 72024572 -68292193 - AluJb SINE Alu -177 135 123 280 336 16 33 chr10 72024894 72025016 -68291749 - MIR3 SINE MIR -18 190 71 666 220 81 0 chr10 72025227 72025413 -68291352 - MER63A DNA MER1_type -8 202 2 24 53 0 0 chr10 72025501 72025539 -68291226 + AT_rich Low_complexity Low_complexity 1 38 0 186 290 16 32 chr10 72026177 72026239 -68290526 - L2 LINE L2 -1071 2243 2183 321 147 15 0 chr10 72027123 72027191 -68289574 - MER53 DNA DNA -84 105 37 201 229 0 71 chr10 72027893 72027963 -68288802 - MIR3 SINE MIR -33 175 111 240 247 182 0 chr10 72028660 72028737 -68288028 - L2 LINE L2 -1 3312 3222 245 347 146 0 chr10 72029869 72030013 -68286752 + L2 LINE L2 3108 3272 0 239 258 65 0 chr10 72030781 72030843 -68285922 - MIR SINE MIR -80 182 117 222 62 0 0 chr10 72030854 72030886 -68285879 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 207 255 147 39 chr10 72031459 72031561 -68285204 - MIR SINE MIR -31 231 119 356 346 30 0 chr10 72031703 72031836 -68284929 + MIR SINE MIR 103 239 -23 220 281 70 0 chr10 72032003 72032060 -68284705 + MIR SINE MIR 81 141 -67 242 292 0 0 chr10 72032677 72032742 -68284023 + MIR3 SINE MIR 90 154 -54 274 322 144 23 chr10 72033206 72033380 -68283385 - MIR SINE MIR -7 255 61 348 298 11 0 chr10 72033851 72033945 -68282820 + MIR3 SINE MIR 64 158 -50 190 261 148 43 chr10 72033975 72034090 -68282675 - MER5B DNA MER1_type -50 128 2 513 320 131 6 chr10 72034377 72034689 -68282076 + L2 LINE L2 2473 2823 -491 331 300 100 87 chr10 72034832 72035202 -68281563 + L3 LINE CR1 1191 1565 -12 603 246 0 0 chr10 72035259 72035373 -68281392 + MER81 DNA DNA 1 114 0 202 192 19 144 chr10 72035606 72035710 -68281055 + MIR3 SINE MIR 101 191 -17 460 156 39 0 chr10 72037742 72037819 -68278946 - AluJo SINE Alu -175 137 58 187 338 0 0 chr10 72037999 72038067 -68278698 - L2 LINE L2 -213 3059 2992 203 0 37 0 chr10 72038187 72038214 -68278551 + (GGA)n Simple_repeat Simple_repeat 2 29 0 194 283 221 0 chr10 72038377 72038490 -68278275 - L2 LINE L2 -1397 1917 1780 301 224 129 61 chr10 72038691 72038838 -68277927 + MIR SINE MIR 35 191 -71 602 368 227 5 chr10 72039981 72040557 -68276208 + L3 LINE CR1 682 1385 -192 236 305 80 73 chr10 72040844 72040995 -68275770 + L3 LINE CR1 1415 1566 -11 272 301 32 38 chr10 72042904 72043068 -68273697 - MIR3 SINE MIR -54 154 17 432 0 0 0 chr10 72043617 72043665 -68273100 + (TG)n Simple_repeat Simple_repeat 2 49 0 346 246 127 16 chr10 72043717 72043843 -68272922 + L2 LINE L2 3133 3272 0 196 296 102 37 chr10 72043834 72043942 -68272823 + MIR3 SINE MIR 2 116 -92 * 356 263 57 16 chr10 72044718 72044899 -68271866 - MIR3 SINE MIR -63 145 9 221 366 0 0 chr10 72045592 72045663 -68271102 + L2 LINE L2 3241 3311 -2 264 275 66 0 chr10 72046067 72046158 -68270607 + MIR3 SINE MIR 63 159 -49 389 283 101 61 chr10 72046226 72046424 -68270341 - MIR SINE MIR -44 218 13 217 328 250 0 chr10 72046680 72046796 -68269969 - L2 LINE L2 -2 3270 3126 223 364 7 46 chr10 72046921 72047072 -68269693 - L2 LINE L2 -213 3059 2915 912 259 92 11 chr10 72047193 72047594 -68269171 - LTR16C LTR ERVL -4 487 1 755 300 25 4 chr10 72047769 72048012 -68268753 + MIR SINE MIR 15 262 0 1851 151 21 0 chr10 72048140 72048422 -68268343 + AluSx SINE Alu 1 291 -21 495 0 0 0 chr10 72048422 72048477 -68268288 + (TATAA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr10 72048789 72048812 -68267953 + AT_rich Low_complexity Low_complexity 1 23 0 854 165 0 0 chr10 72048872 72049005 -68267760 - FLAM_C SINE Alu 0 133 1 246 247 0 82 chr10 72049043 72049128 -68267637 + MIR SINE MIR 120 197 -65 325 345 18 0 chr10 72051477 72051590 -68265175 + MIR3 SINE MIR 82 196 -12 420 242 158 36 chr10 72053050 72053215 -68263550 - MIR3 SINE MIR -23 185 1 377 333 8 0 chr10 72053748 72053877 -68262888 - MIR3 SINE MIR -13 195 66 309 337 11 72 chr10 72054593 72054774 -68261991 - MIR SINE MIR -25 237 68 294 262 214 0 chr10 72054792 72054876 -68261889 - L2 LINE L2 -10 3262 3161 354 247 72 0 chr10 72055832 72055929 -68260836 - MIR3 SINE MIR -24 184 81 435 292 122 54 chr10 72056088 72056424 -68260341 + L2 LINE L2 2912 3270 -2 566 271 92 84 chr10 72056506 72056886 -68259879 + MLT1J2 LTR MaLR 68 450 0 276 366 74 5 chr10 72058053 72058255 -68258510 + L2 LINE L2 2830 3045 -227 2259 182 47 105 chr10 72058259 72058923 -68257842 + MLT1E2 LTR MaLR 2 626 0 700 250 53 29 chr10 72058939 72059086 -68257679 + MLT1G LTR MaLR 15 157 -433 2245 85 0 0 chr10 72059086 72059396 -68257369 + AluSx SINE Alu 1 310 0 700 250 53 29 chr10 72059396 72059720 -68257045 + MLT1G LTR MaLR 157 587 -3 283 243 65 75 chr10 72060767 72060874 -68255891 - MIR SINE MIR -67 141 36 467 339 54 14 chr10 72060904 72061125 -68255640 - L3 LINE CR1 -10 1567 1338 337 215 9 28 chr10 72061202 72061636 -68255129 + (TG)n Simple_repeat Simple_repeat 1 426 0 603 214 0 2 chr10 72061710 72062141 -68254624 + (TG)n Simple_repeat Simple_repeat 1 429 0 429 204 0 0 chr10 72062643 72062795 -68253970 + (TG)n Simple_repeat Simple_repeat 1 152 0 242 296 0 0 chr10 72064364 72064418 -68252347 + MER91A DNA MER1_type 4 57 -139 253 236 16 57 chr10 72064705 72064828 -68251937 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 313 303 19 31 chr10 72065340 72065502 -68251263 + (TG)n Simple_repeat Simple_repeat 2 161 0 291 319 157 16 chr10 72065710 72065901 -68250864 - MIR SINE MIR -19 243 26 300 296 262 17 chr10 72066080 72066252 -68250513 + MIR SINE MIR 47 260 -2 230 278 28 0 chr10 72066568 72066640 -68250125 + MIR SINE MIR 79 152 -56 240 254 227 0 chr10 72066795 72066905 -68249860 + MIR SINE MIR 18 152 -56 323 298 181 16 chr10 72067025 72067213 -68249552 + MIR SINE MIR 9 227 -35 292 310 14 0 chr10 72067434 72067505 -68249260 - L2 LINE L2 -2 3311 3240 207 248 101 83 chr10 72067743 72067852 -68248913 - MIR3 SINE MIR -11 197 87 786 245 27 0 chr10 72068737 72068921 -68247844 + MIR SINE MIR 74 262 0 207 320 49 49 chr10 72068968 72069090 -68247675 + MIR SINE MIR 37 158 -104 414 296 80 6 chr10 72070187 72070363 -68246402 + MIR SINE MIR 74 262 0 515 247 18 87 chr10 72071222 72071487 -68245278 + MIR SINE MIR 11 253 -9 2362 154 43 21 chr10 72071605 72072028 -68244737 + MSTB1 LTR MaLR 1 432 0 1013 327 66 42 chr10 72072235 72072991 -68243774 + L1ME2 LINE L1 59 815 -5581 6210 217 72 11 chr10 72073006 72075398 -68241367 + L1ME2 LINE L1 3684 6224 -9 314 313 92 29 chr10 72075432 72075652 -68241113 - MIR SINE MIR -19 243 2 205 121 0 0 chr10 72075865 72075898 -68240867 + MIR SINE MIR 112 144 -64 574 266 85 0 chr10 72076213 72076390 -68240375 - L3 LINE CR1 -15 1562 1371 243 171 214 14 chr10 72076397 72076467 -68240298 - LTR33 LTR ERVL -4 517 434 852 254 0 32 chr10 72077029 72077246 -68239519 - MER63A DNA MER1_type 0 210 1 1251 238 94 24 chr10 72077614 72078088 -68238677 - L1ME3 LINE L1 -91 6071 5569 201 349 53 15 chr10 72079922 72080054 -68236711 + MIR3 SINE MIR 11 147 -61 210 37 0 0 chr10 72080259 72080286 -68236479 + (TG)n Simple_repeat Simple_repeat 2 28 0 190 341 59 44 chr10 72080829 72081149 -68235616 + L2 LINE L2 2964 3288 -25 294 317 32 8 chr10 72081732 72081855 -68234910 - MIR3 SINE MIR -24 184 59 21 0 0 0 chr10 72081887 72081908 -68234857 + AT_rich Low_complexity Low_complexity 1 21 0 1110 239 7 34 chr10 72082002 72082299 -68234466 + L1ME4a LINE L1 5648 5936 -185 330 286 128 15 chr10 72082384 72082517 -68234248 + MIR SINE MIR 2 149 -113 304 288 91 35 chr10 72083821 72084019 -68232746 + LTR16A1 LTR ERVL 236 444 -13 359 308 10 0 chr10 72084853 72084957 -68231808 + L2 LINE L2 3208 3312 -1 218 333 13 27 chr10 72085193 72085268 -68231497 - MIR SINE MIR 0 262 189 654 246 115 20 chr10 72085570 72085822 -68230943 - LTR33 LTR ERVL -11 510 235 294 235 15 0 chr10 72085999 72086067 -68230698 + LTR67 LTR ERVL 479 547 -10 2581 103 59 7 chr10 72086076 72086483 -68230282 - MSTA LTR MaLR 0 428 1 185 205 128 26 chr10 72086493 72086571 -68230194 - MIR SINE MIR -108 154 69 1176 90 22 0 chr10 72086695 72086873 -68229892 + MER41B LTR ERV1 1 182 -453 2866 92 24 86 chr10 72086881 72087384 -68229381 + MER41A LTR ERV1 83 554 0 190 276 35 0 chr10 72088188 72088246 -68228519 - L3 LINE CR1 -5 1572 1513 716 190 25 78 chr10 72088459 72088701 -68228064 - Charlie5 DNA MER1_type -27 2585 2357 301 287 143 14 chr10 72088921 72089130 -68227635 + L2 LINE L2 2429 2664 -650 400 307 82 34 chr10 72089189 72089544 -68227221 - LTR16C LTR ERVL -21 470 99 485 335 70 25 chr10 72089643 72090202 -68226563 + L2 LINE L2 2720 3297 -16 265 259 45 54 chr10 72090319 72090431 -68226334 - L3 LINE CR1 -538 1039 929 1194 297 63 10 chr10 72090844 72091332 -68225433 + L1ME3A LINE L1 5444 5957 -213 2363 84 0 10 chr10 72091585 72091902 -68224863 - AluY SINE Alu 0 311 3 610 278 30 15 chr10 72092914 72093112 -68223653 + MER63A DNA MER1_type 2 202 -8 1874 141 57 10 chr10 72093352 72093650 -68223115 - AluSx SINE Alu 0 312 1 260 296 68 0 chr10 72093890 72093978 -68222787 + MER94 DNA DNA 1 94 -40 234 305 98 78 chr10 72094630 72094925 -68221840 + L2 LINE L2 2953 3253 -19 369 169 0 0 chr10 72095063 72095128 -68221637 + L1PB4 LINE L1 6079 6143 -13 552 263 20 50 chr10 72095147 72095345 -68221420 - MIR SINE MIR -57 205 14 377 270 183 0 chr10 72095281 72095407 -68221358 + MIR SINE MIR 8 156 -106 * 548 307 120 34 chr10 72096695 72097102 -68219663 - L1ME LINE L1 -297 5824 5383 557 212 7 29 chr10 72097627 72097764 -68219001 - L2 LINE L2 -1 3312 3179 495 273 23 0 chr10 72097814 72097946 -68218819 - MIR3 SINE MIR -27 181 47 192 125 0 0 chr10 72098195 72098227 -68218538 + (GA)n Simple_repeat Simple_repeat 2 33 0 480 258 168 19 chr10 72099190 72099399 -68217366 - MIR SINE MIR -1 261 22 2280 161 29 7 chr10 72100387 72100802 -68215963 + MSTB LTR MaLR 1 424 -2 182 160 32 32 chr10 72101010 72101104 -68215661 + (TCTCTG)n Simple_repeat Simple_repeat 6 99 0 755 181 14 100 chr10 72101437 72101553 -68215212 - MLT1A1 LTR MaLR -173 192 100 2407 83 20 0 chr10 72101553 72101855 -68214910 - AluY SINE Alu -3 308 1 755 181 14 100 chr10 72101855 72101948 -68214817 - MLT1A1 LTR MaLR -265 100 1 6695 213 80 10 chr10 72101948 72103388 -68213377 - MLT1A1-int LTR MaLR 0 1735 195 374 318 23 32 chr10 72103391 72103608 -68213157 + HERVL LTR ERVL 3849 4063 -1591 285 29 0 0 chr10 72103955 72103989 -68212776 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 354 330 69 45 chr10 72103994 72104285 -68212480 - L2 LINE L2 -11 3302 3005 2381 122 59 28 chr10 72104294 72104812 -68211953 - MLT2A2 LTR ERVL 0 554 1 189 245 127 47 chr10 72106290 72106433 -68210332 + MIR3 SINE MIR 4 164 -62 284 208 13 26 chr10 72107180 72107257 -68209508 + MIR SINE MIR 50 125 -83 282 296 28 28 chr10 72107629 72107771 -68208994 - MIR SINE MIR -92 170 29 449 205 8 0 chr10 72108413 72108540 -68208225 + (TCCA)n Simple_repeat Simple_repeat 4 131 0 279 191 0 0 chr10 72108662 72108730 -68208035 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 263 246 0 0 chr10 72108824 72108889 -68207876 - MIR SINE MIR -62 146 82 447 231 116 0 chr10 72108928 72109049 -68207716 + MER91A DNA MER1_type 22 156 -40 2190 219 149 17 chr10 72109441 72110097 -68206668 - L1ME1 LINE L1 -5 6161 5419 298 209 29 86 chr10 72110260 72110365 -68206400 + MIR SINE MIR 107 205 -57 213 228 18 0 chr10 72111007 72111064 -68205701 - MIR SINE MIR -126 136 79 302 336 28 66 chr10 72111127 72111338 -68205427 - MIR SINE MIR -39 223 21 500 264 104 18 chr10 72111604 72111767 -68204998 - MIR SINE MIR -79 183 7 406 286 109 0 chr10 72111937 72112084 -68204681 + MIR SINE MIR 30 192 -70 1705 124 90 36 chr10 72112339 72112695 -68204070 - THE1C LTR MaLR 0 375 1 301 331 38 0 chr10 72113355 72113492 -68203273 + MIR SINE MIR 10 149 -62 183 346 13 13 chr10 72113862 72113940 -68202825 - L2 LINE L2 -71 3201 3124 589 261 163 19 chr10 72114011 72114226 -68202539 - MIR SINE MIR -3 259 14 480 263 96 0 chr10 72115029 72115185 -68201580 - L2 LINE L2 -213 3059 2889 205 253 121 22 chr10 72115806 72115897 -68200868 - MIR SINE MIR -84 124 25 213 206 0 63 chr10 72116203 72116266 -68200499 + G-rich Low_complexity Low_complexity 1 59 0 422 205 200 27 chr10 72116603 72116788 -68199977 + L1MC4 LINE L1 5714 5930 -1878 300 111 0 0 chr10 72116789 72116834 -68199931 + (CA)n Simple_repeat Simple_repeat 2 46 0 245 348 0 26 chr10 72116851 72116966 -68199799 + MIR SINE MIR 151 262 0 214 335 165 6 chr10 72117211 72117369 -68199396 + L3 LINE CR1 1335 1517 -60 199 304 76 13 chr10 72117440 72117519 -68199246 - MER5B DNA MER1_type -28 150 67 29603 69 4 2 chr10 72117620 72121444 -68195321 - HERVL-A2 LTR ERVL -376 5278 1446 1103 110 7 0 chr10 72121447 72121601 -68195164 - HERVL-A2 LTR ERVL -4709 945 791 10857 61 20 3 chr10 72121601 72123023 -68193742 - HERVL-A2 LTR ERVL -4209 1445 1 311 51 0 0 chr10 72123023 72123062 -68193703 - MLT2A2 LTR ERVL 0 453 415 194 0 0 37 chr10 72123063 72123090 -68193675 + (TA)n Simple_repeat Simple_repeat 2 27 0 333 236 75 66 chr10 72123110 72123415 -68193350 + L1MC4 LINE L1 6550 7742 -219 32 0 0 0 chr10 72123415 72123447 -68193318 + AT_rich Low_complexity Low_complexity 1 32 0 1775 127 54 10 chr10 72123547 72123861 -68192904 - HERVL-A1 LTR ERVL -5326 328 1 361 102 0 31 chr10 72123861 72123940 -68192825 - MLT2A1 LTR ERVL 0 444 390 591 150 28 7 chr10 72123943 72124231 -68192534 + (TA)n Simple_repeat Simple_repeat 1 294 0 350 306 56 9 chr10 72124245 72124353 -68192412 - L1MC4 LINE L1 -1335 6707 6595 * 351 250 45 77 chr10 72124340 72124496 -68192269 - L1MCa LINE L1 -4334 2092 1942 341 122 14 0 chr10 72124496 72124570 -68192195 + (TA)n Simple_repeat Simple_repeat 2 76 0 2523 115 26 5 chr10 72124571 72124962 -68191803 - MLT2A1 LTR ERVL -45 399 1 235 228 0 0 chr10 72124963 72125020 -68191745 + L1ME1 LINE L1 5369 5425 -934 1920 173 3 0 chr10 72125021 72125327 -68191438 + AluJo SINE Alu 1 307 -5 1673 194 33 41 chr10 72125346 72125712 -68191053 + MSTD LTR MaLR 27 389 -7 2214 252 39 17 chr10 72125713 72126360 -68190405 + L1ME1 LINE L1 5449 6109 -57 471 144 19 19 chr10 72126360 72126464 -68190301 + L1MA9 LINE L1 6209 6312 0 193 208 28 14 chr10 72126719 72126791 -68189974 + CT-rich Low_complexity Low_complexity 3 75 0 234 348 116 0 chr10 72126928 72127040 -68189725 - MIR3 SINE MIR -45 163 39 1059 236 142 34 chr10 72127804 72128219 -68188546 + MLT1D LTR MaLR 41 500 -5 260 244 63 103 chr10 72128483 72128741 -68188024 + L1ME3A LINE L1 5674 5930 -240 464 259 152 6 chr10 72128872 72129030 -68187735 - MER5A DNA MER1_type 0 189 9 276 313 50 12 chr10 72129071 72129231 -68187534 + MER5B DNA MER1_type 5 170 -8 2075 138 0 3 chr10 72129443 72129739 -68187026 + AluJb SINE Alu 1 295 -17 317 305 18 0 chr10 72130134 72130301 -68186464 + (CAGT)n Simple_repeat Simple_repeat 2 171 0 213 65 0 0 chr10 72130513 72130544 -68186221 + (TCTG)n Simple_repeat Simple_repeat 3 33 0 359 321 64 0 chr10 72131524 72131664 -68185101 - MIR SINE MIR -21 241 93 1830 194 2 38 chr10 72132682 72133125 -68183640 + L1MC1 LINE L1 4883 5309 -837 1558 169 38 61 chr10 72133126 72133439 -68183326 + AluJb SINE Alu 1 306 -6 1163 92 19 15 chr10 72133447 72133773 -68182992 + (GAAA)n Simple_repeat Simple_repeat 3 328 0 236 158 0 0 chr10 72133773 72133811 -68182954 + GA-rich Low_complexity Low_complexity 1 38 0 5954 139 14 16 chr10 72133811 72134480 -68182285 + L1MC1 LINE L1 5304 5972 -361 2209 80 69 0 chr10 72134480 72134769 -68181996 + AluSc SINE Alu 1 309 0 5954 139 14 16 chr10 72134769 72135131 -68181634 + L1MC1 LINE L1 5972 6333 0 743 264 84 9 chr10 72135261 72135488 -68181277 - MIR SINE MIR -15 247 4 199 214 71 0 chr10 72135553 72135609 -68181156 - MIR SINE MIR -110 152 93 2410 88 0 0 chr10 72136121 72136417 -68180348 + AluSx SINE Alu 1 296 -16 832 195 17 123 chr10 72136436 72136973 -68179792 + L1MD3 LINE L1 6730 7317 -678 378 183 14 0 chr10 72136985 72137056 -68179709 + MLT1F1 LTR MaLR 51 122 -445 482 210 50 0 chr10 72137057 72137176 -68179589 + L1MD3 LINE L1 7402 7526 -469 559 138 32 0 chr10 72137237 72137331 -68179434 + L1MD3 LINE L1 7890 7986 -9 189 0 0 0 chr10 72137781 72137802 -68178963 + (A)n Simple_repeat Simple_repeat 1 21 0 260 254 34 0 chr10 72137840 72137899 -68178866 + MIR SINE MIR 90 150 -58 391 311 90 12 chr10 72137991 72138158 -68178607 + MIR SINE MIR 47 226 -36 288 302 71 16 chr10 72139166 72139292 -68177473 - MIR3 SINE MIR -47 161 29 200 322 136 8 chr10 72139388 72139506 -68177259 - L2 LINE L2 -12 3260 3128 588 261 164 12 chr10 72139809 72139974 -68176791 - MER91A DNA MER1_type -6 190 1 185 300 14 14 chr10 72140064 72140134 -68176631 + MIR SINE MIR 86 155 -107 419 343 20 0 chr10 72141385 72141531 -68175234 - MIR SINE MIR -3 259 111 491 306 135 25 chr10 72142651 72142896 -68173869 - L3 LINE CR1 -27 1550 1279 809 252 123 30 chr10 72143103 72143476 -68173289 + MLT1H LTR MaLR 138 545 -4 295 346 19 0 chr10 72143495 72143599 -68173166 + MIR SINE MIR 47 152 -110 239 368 32 39 chr10 72144211 72144366 -68172399 - MIR3 SINE MIR -8 200 47 201 74 0 0 chr10 72144619 72144646 -68172119 + (CA)n Simple_repeat Simple_repeat 2 28 0 324 120 0 0 chr10 72144976 72145026 -68171739 + (ATG)n Simple_repeat Simple_repeat 1 50 0 549 96 0 0 chr10 72145037 72145110 -68171655 - Alu SINE Alu -18 292 220 505 300 57 38 chr10 72145112 72145322 -68171443 + MIR SINE MIR 30 243 -19 219 281 73 42 chr10 72146350 72146446 -68170319 - MIR SINE MIR -63 145 47 3953 27 0 0 chr10 72146541 72146992 -68169773 + L1PA3 LINE L1 5702 6152 -3 281 153 14 69 chr10 72147041 72147113 -68169652 + L3 LINE CR1 1407 1474 -103 276 242 111 10 chr10 72147421 72147520 -68169245 - MIR SINE MIR -69 139 31 762 215 81 0 chr10 72147525 72147697 -68169068 + MER5A DNA MER1_type 1 186 -3 271 296 41 41 chr10 72147865 72147963 -68168802 - MIR SINE MIR -87 121 24 535 297 96 19 chr10 72148495 72148704 -68168061 - MIR SINE MIR -15 247 23 222 244 207 37 chr10 72148847 72148929 -68167836 + MIR SINE MIR 22 117 -145 760 194 55 0 chr10 72148996 72149161 -68167604 + MIR SINE MIR 85 258 -4 1617 160 24 113 chr10 72149236 72149390 -68167375 + MER7A DNA MER2_type 2 168 -2870 2320 80 0 52 chr10 72149390 72149714 -68167051 - AluY SINE Alu -4 307 1 1617 160 24 113 chr10 72149714 72149940 -68166825 + MER7A DNA MER2_type 168 346 0 313 292 15 77 chr10 72150031 72150161 -68166604 + MIR3 SINE MIR 39 160 -48 561 218 93 32 chr10 72152351 72152567 -68164198 + LTR16C LTR ERVL 263 491 0 315 104 0 0 chr10 72152889 72152937 -68163828 + (TG)n Simple_repeat Simple_repeat 2 49 0 370 284 71 24 chr10 72153606 72153775 -68162990 - MIR3 SINE MIR -28 180 4 1219 231 93 28 chr10 72154039 72154471 -68162294 + MLT1C LTR MaLR 6 465 -2 386 318 9 0 chr10 72155022 72155132 -68161633 - MIR3 SINE MIR -40 168 58 278 327 99 10 chr10 72155517 72155618 -68161147 + MIR3 SINE MIR 50 159 -49 321 188 72 0 chr10 72155829 72155898 -68160867 - MIR SINE MIR -78 184 111 373 232 58 65 chr10 72156756 72156908 -68159857 + MIR SINE MIR 35 181 -58 183 327 64 0 chr10 72157749 72157859 -68158906 + L3b LINE CR1 1278 1394 -189 692 276 102 13 chr10 72157986 72158377 -68158388 + LTR16A1 LTR ERVL 10 435 -22 687 308 180 8 chr10 72158403 72158937 -68157828 - L2 LINE L2 0 3313 2686 512 277 92 34 chr10 72159236 72159347 -68157418 + LTR16C LTR ERVL 240 343 -148 1876 192 31 8 chr10 72159347 72159701 -68157064 + MLT1A1 LTR MaLR 1 362 -3 512 277 92 34 chr10 72159701 72159827 -68156938 + LTR16C LTR ERVL 343 491 0 1218 272 32 48 chr10 72159829 72160033 -68156732 - L2 LINE L2 -705 2609 2403 2344 93 6 6 chr10 72160033 72160346 -68156419 + AluSq SINE Alu 1 313 0 1218 272 32 48 chr10 72160346 72160616 -68156149 - L2 LINE L2 -911 2403 2143 489 288 32 0 chr10 72160759 72160884 -68155881 - MER91C DNA MER1_type 0 140 12 375 317 43 25 chr10 72160978 72161139 -68155626 - L2 LINE L2 -251 3062 2899 399 194 0 0 chr10 72161781 72161884 -68154881 + (CA)n Simple_repeat Simple_repeat 2 104 0 650 282 39 84 chr10 72161884 72162217 -68154548 + L2 LINE L2 2939 3256 -16 241 245 52 83 chr10 72163045 72163199 -68153566 - L2 LINE L2 -707 2607 2459 2120 109 20 14 chr10 72163199 72163493 -68153272 + AluSq SINE Alu 1 296 -17 241 245 52 83 chr10 72163493 72163530 -68153235 - L2 LINE L2 -855 2459 2422 914 138 12 25 chr10 72163653 72163813 -68152952 + MLT1D LTR MaLR 1 158 -347 1079 200 5 5 chr10 72163817 72164037 -68152728 + MLT1D LTR MaLR 286 505 0 1658 169 33 0 chr10 72164044 72164160 -68152605 + AluJo SINE Alu 1 112 -200 342 0 0 0 chr10 72164160 72164198 -68152567 + (CA)n Simple_repeat Simple_repeat 1 38 0 1658 169 33 0 chr10 72164198 72164354 -68152411 + AluJo SINE Alu 112 282 -30 409 280 119 6 chr10 72164427 72164595 -68152170 - L2 LINE L2 -813 2501 2315 276 289 0 0 chr10 72165666 72165742 -68151023 - MIR SINE MIR -102 160 85 2179 131 18 34 chr10 72165863 72166244 -68150521 + THE1C LTR MaLR 1 375 0 476 206 41 0 chr10 72166280 72166377 -68150388 - MER5A DNA MER1_type -80 109 9 234 222 14 97 chr10 72166753 72166814 -68149951 + MIR3 SINE MIR 103 157 -51 203 132 19 170 chr10 72166814 72166867 -68149898 - MER5B DNA MER1_type -1 177 133 3196 216 48 52 chr10 72166869 72168059 -68148706 - L1ME1 LINE L1 0 6235 5059 422 49 16 0 chr10 72168059 72168120 -68148645 + (TG)n Simple_repeat Simple_repeat 2 63 0 4614 237 50 31 chr10 72168644 72170109 -68146656 - L1ME1 LINE L1 -1175 5040 3548 2659 216 17 43 chr10 72170138 72170883 -68145882 + L1MB7 LINE L1 4064 4789 -1357 1071 96 72 6 chr10 72170987 72171153 -68145612 + MLT2A1 LTR ERVL 268 444 0 2586 162 30 2 chr10 72171153 72171647 -68145118 + L1MB7 LINE L1 5646 6153 -31 * 3955 218 31 59 chr10 72171644 72173402 -68143363 - L1ME1 LINE L1 -2642 3573 1855 889 295 0 30 chr10 72173406 72173674 -68143091 + L1MEc LINE L1 51 310 -6086 410 146 83 0 chr10 72173904 72174000 -68142765 - L1M4 LINE L1 -3224 2922 2819 413 237 7 58 chr10 72174002 72174141 -68142624 - L1ME1 LINE L1 -6214 182 51 1131 200 38 30 chr10 72174145 72174594 -68142171 + L1MEc LINE L1 1855 2367 -4029 467 316 105 8 chr10 72174585 72174832 -68141933 + L1ME LINE L1 5505 5775 -346 * 462 192 0 0 chr10 72175393 72175471 -68141294 + L1MC3 LINE L1 7222 7299 -486 1798 198 57 46 chr10 72175471 72175925 -68140840 - MLT1C LTR MaLR 0 467 9 1665 147 51 122 chr10 72175927 72176355 -68140410 + L1MC3 LINE L1 7301 7698 -87 1260 113 0 0 chr10 72176359 72176527 -68140238 - THE1-int LTR MaLR -733 847 680 270 111 0 0 chr10 72176531 72176567 -68140198 + MSTB-int LTR MaLR 1274 1309 -271 255 105 92 53 chr10 72176569 72176629 -68140136 + L1MC2 LINE L1 6266 6331 -13 2062 107 0 3 chr10 72176629 72176920 -68139845 + AluSc SINE Alu 1 290 -19 255 105 92 53 chr10 72176920 72176935 -68139830 + L1MC2 LINE L1 6331 6344 0 1105 220 54 33 chr10 72176944 72177335 -68139430 + L1MEc LINE L1 3022 3420 -2795 632 204 0 0 chr10 72177336 72177478 -68139287 - L1MA4 LINE L1 -6 6294 6153 2736 77 8 0 chr10 72177478 72177830 -68138935 + THE1A LTR MaLR 1 355 0 12048 89 10 0 chr10 72177831 72179395 -68137370 + THE1A-int LTR MaLR 2 1580 0 2370 118 3 3 chr10 72179395 72179733 -68137032 + THE1A LTR MaLR 1 338 -17 1479 202 7 7 chr10 72179729 72180006 -68136759 - LTR57 LTR ERVL -134 277 1 * 407 129 0 0 chr10 72180017 72180079 -68136686 - AluJb SINE Alu -16 296 235 1172 148 0 6 chr10 72180079 72180261 -68136504 - AluJb SINE Alu -131 181 1 7452 190 27 22 chr10 72180261 72181894 -68134871 - L1 LINE L1 -2356 3972 2348 1596 174 53 0 chr10 72181894 72182176 -68134589 - AluJb SINE Alu -15 297 1 7452 190 27 22 chr10 72182176 72182889 -68133876 - L1 LINE L1 -3980 2348 1640 2002 113 0 11 chr10 72182889 72183203 -68133562 - AluSg SINE Alu 0 311 1 7452 190 27 22 chr10 72183203 72184802 -68131963 - L1 LINE L1 -4688 1640 10 4538 230 57 20 chr10 72184803 72186181 -68130584 + L1MEc LINE L1 3408 4836 -1379 2622 265 39 20 chr10 72186317 72187395 -68129370 + L1ME LINE L1 4382 5484 -682 2515 158 39 2 chr10 72187395 72187806 -68128959 + MSTB LTR MaLR 1 426 0 5937 181 98 5 chr10 72187806 72188931 -68127834 + MSTB-int LTR MaLR 1 1229 -422 539 149 0 35 chr10 72188932 72189019 -68127746 - FRAM SINE Alu -81 95 12 11670 86 7 4 chr10 72189047 72190540 -68126225 + THE1B-int LTR MaLR 82 1579 -1 2183 131 51 26 chr10 72190540 72190891 -68125874 + THE1B LTR MaLR 5 364 0 212 234 191 32 chr10 72190891 72190985 -68125780 - MER5B DNA MER1_type -18 160 52 5018 110 25 0 chr10 72190994 72191714 -68125051 - L1PA13 LINE L1 -2 6161 5424 255 263 42 42 chr10 72191714 72191809 -68124956 + MLT1E3 LTR MaLR 398 492 -132 21420 180 37 7 chr10 72191850 72195333 -68121432 - L1PA13 LINE L1 -757 6040 2301 2126 113 0 0 chr10 72195333 72195625 -68121140 + AluSc SINE Alu 1 292 -17 21420 180 37 7 chr10 72195625 72197998 -68118767 - L1PA13 LINE L1 -4496 2301 1 304 237 0 0 chr10 72198009 72198068 -68118697 - MER5B DNA MER1_type -114 64 6 584 240 116 12 chr10 72198117 72198320 -68118445 - MIR SINE MIR -12 250 15 323 313 98 12 chr10 72198770 72198933 -68117832 - MIR3 SINE MIR -23 185 9 3287 164 72 34 chr10 72199943 72200612 -68116153 + LTR8A LTR ERV1 34 727 0 219 36 0 0 chr10 72201110 72201138 -68115627 + (CA)n Simple_repeat Simple_repeat 1 28 0 643 306 185 2 chr10 72201152 72201645 -68115120 - L1MC4a LINE L1 -1910 5898 5316 2224 103 0 3 chr10 72201659 72201971 -68114794 - AluSx SINE Alu -1 311 1 1711 309 133 23 chr10 72202199 72202944 -68113821 + L3 LINE CR1 79 905 -672 210 289 158 21 chr10 72203029 72203219 -68113546 + L3 LINE CR1 1171 1386 -191 210 281 10 125 chr10 72203522 72203714 -68113051 - MIR3 SINE MIR -24 184 15 318 309 81 40 chr10 72204883 72205106 -68111659 - MIR SINE MIR -3 259 28 420 247 38 32 chr10 72205461 72205619 -68111146 - HAL1 LINE L1 -76 2431 2273 188 308 25 63 chr10 72205872 72206031 -68110734 + L2 LINE L2 2904 3056 -216 264 294 98 28 chr10 72206414 72206557 -68110208 - MIR3 SINE MIR -55 153 1 234 258 113 0 chr10 72206823 72206920 -68109845 - MIR SINE MIR -68 140 33 1218 242 60 18 chr10 72207205 72207557 -68109208 - MLT1A2 LTR MaLR 0 374 15 310 234 153 24 chr10 72209066 72209190 -68107575 - MIR SINE MIR -70 192 53 1397 197 125 55 chr10 72210690 72211147 -68105618 + MLT1D LTR MaLR 12 500 -5 220 301 179 17 chr10 72211151 72211324 -68105441 + L2 LINE L2 2856 3056 -216 1348 146 5 0 chr10 72211672 72211891 -68104874 + AluSg/x SINE Alu 84 303 -9 285 250 167 0 chr10 72212144 72212240 -68104525 + MIR SINE MIR 112 223 -39 1682 140 0 26 chr10 72212293 72212565 -68104200 - AluSg SINE Alu -45 265 1 232 351 32 11 chr10 72212877 72212971 -68103794 - L2 LINE L2 -604 2710 2615 803 304 108 29 chr10 72213598 72214183 -68102582 - ERVL LTR ERVL -715 5049 4419 577 296 119 32 chr10 72214478 72214857 -68101908 - ERVL LTR ERVL -1613 4041 3630 441 308 68 49 chr10 72215086 72215349 -68101416 - ERVL LTR ERVL -2367 3287 3020 534 265 143 59 chr10 72215696 72216186 -68100579 - LTR67 LTR ERVL -4 553 23 280 355 97 0 chr10 72223457 72223581 -68093184 - MIR3 SINE MIR -52 156 21 303 274 32 0 chr10 72224229 72224324 -68092441 - MIR SINE MIR -118 144 47 629 236 81 0 chr10 72224539 72224700 -68092065 + MIR SINE MIR 14 187 -75 384 22 0 0 chr10 72224863 72224908 -68091857 + (TG)n Simple_repeat Simple_repeat 1 45 0 375 325 19 67 chr10 72224949 72225158 -68091607 - L3 LINE CR1 -11 1566 1368 225 167 0 0 chr10 72225466 72225502 -68091263 + MIR SINE MIR 204 239 -23 463 186 144 0 chr10 72225730 72225848 -68090917 - MIR SINE MIR -114 148 14 470 175 140 0 chr10 72226775 72226889 -68089876 + MIR SINE MIR 14 143 -119 217 167 0 0 chr10 72227122 72227158 -68089607 - MIR SINE MIR -23 239 204 365 345 10 44 chr10 72227466 72227672 -68089093 + L3 LINE CR1 1368 1566 -11 224 287 215 27 chr10 72228780 72229003 -68087762 + L2 LINE L2 2995 3259 -54 271 176 30 9 chr10 72229498 72229593 -68087172 - MIR3 SINE MIR -42 166 69 207 318 37 28 chr10 72230039 72230146 -68086619 + MIR SINE MIR 61 168 -94 * 223 284 253 11 chr10 72230126 72230221 -68086544 - L2 LINE L2 0 3313 3196 841 305 120 65 chr10 72230320 72231359 -68085406 - L2 LINE L2 -365 2949 1853 463 260 146 25 chr10 72232034 72232409 -68084356 + LTR33A LTR ERVL 55 523 0 201 246 127 79 chr10 72232433 72232559 -68084206 + MIR SINE MIR 123 254 -8 195 149 149 45 chr10 72232812 72232879 -68083886 + L2 LINE L2 3153 3226 -46 212 298 29 48 chr10 72232934 72233038 -68083727 - MIR SINE MIR -35 227 126 215 277 96 0 chr10 72233173 72233256 -68083509 + MER91C DNA MER1_type 29 119 -21 215 162 0 0 chr10 72233687 72233724 -68083041 + MIR SINE MIR 109 145 -63 195 289 0 0 chr10 72233922 72233974 -68082791 + MIR SINE MIR 95 146 -116 256 194 69 28 chr10 72234512 72234584 -68082181 - MIR3 SINE MIR -21 187 113 586 220 35 0 chr10 72234751 72234904 -68081861 - MIR SINE MIR -62 146 36 713 274 85 41 chr10 72235926 72236316 -68080449 - LTR16C LTR ERVL 0 491 85 263 289 11 123 chr10 72236560 72236747 -68080018 + L2 LINE L2 2907 3072 -200 181 288 51 17 chr10 72238392 72238451 -68078314 - MER5B DNA MER1_type -109 69 9 195 291 18 0 chr10 72238611 72238666 -68078099 - L2 LINE L2 -845 2469 2414 205 187 18 5 chr10 72240234 72240299 -68076466 - MIR SINE MIR -71 137 81 382 275 19 38 chr10 72240585 72240625 -68076140 - MER103 DNA DNA -7 159 120 1655 213 19 8 chr10 72240625 72240986 -68075779 - MLT1A1 LTR MaLR 0 365 1 382 275 19 38 chr10 72240986 72241105 -68075660 - MER103 DNA DNA -46 120 3 342 254 159 8 chr10 72241499 72241625 -68075140 - MIR SINE MIR -114 148 4 285 312 148 42 chr10 72241625 72241773 -68074992 + MIR SINE MIR 87 254 -8 2097 103 21 7 chr10 72245032 72245323 -68071442 + AluSx SINE Alu 2 296 -16 317 249 130 4 chr10 72247513 72247650 -68069115 + L1MB8 LINE L1 5963 6108 -70 1532 191 40 4 chr10 72248098 72248375 -68068390 + AluJb SINE Alu 1 287 -25 192 125 0 0 chr10 72250688 72250720 -68066045 + (AGCTG)n Simple_repeat Simple_repeat 4 35 0 1228 251 135 2 chr10 72252160 72252567 -68064198 + MLT1C LTR MaLR 1 461 -6 255 133 0 0 chr10 72255187 72255232 -68061533 + (TA)n Simple_repeat Simple_repeat 1 45 0 283 292 41 11 chr10 72255912 72256035 -68060730 + MIR SINE MIR 66 149 -59 227 235 61 71 chr10 72256569 72256667 -68060098 + MIR SINE MIR 86 182 -80 341 287 23 0 chr10 72257078 72257165 -68059600 - MIR SINE MIR -94 168 80 221 114 0 0 chr10 72257289 72257324 -68059441 - MIR SINE MIR -117 145 111 231 152 0 0 chr10 72258316 72258362 -68058403 + (CA)n Simple_repeat Simple_repeat 2 47 0 2277 114 3 3 chr10 72260678 72260986 -68055779 + AluSx SINE Alu 1 308 -4 359 302 84 97 chr10 72261695 72261779 -68054986 - L2 LINE L2 -1 3271 3187 2309 98 3 0 chr10 72261779 72262076 -68054689 + AluSx SINE Alu 3 300 -12 359 302 84 97 chr10 72262076 72262548 -68054217 - L2 LINE L2 -85 3187 2723 372 293 14 14 chr10 72262574 72262721 -68054044 - LTR16C LTR ERVL 0 491 345 6991 152 73 12 chr10 72263155 72264628 -68052137 + L1PA13 LINE L1 3765 5427 -736 2197 122 3 3 chr10 72264628 72264924 -68051841 + AluSq SINE Alu 1 296 -17 6991 152 73 12 chr10 72264924 72265702 -68051063 + L1PA13 LINE L1 5427 6157 -6 181 373 122 32 chr10 72266013 72266292 -68050473 + L2 LINE L2 2223 2526 -788 330 291 54 4 chr10 72267275 72267399 -68049366 - L1M3 LINE L1 -561 5610 5486 611 237 211 11 chr10 72267723 72267989 -68048776 + MER58D DNA MER1_type 67 385 -1 1481 183 47 7 chr10 72270635 72270909 -68045856 - AluJb SINE Alu -27 285 1 835 279 56 12 chr10 72271413 72271664 -68045101 + LTR16A LTR ERVL 189 450 0 37 62 0 0 chr10 72272063 72272128 -68044637 + AT_rich Low_complexity Low_complexity 1 65 0 490 322 120 0 chr10 72272491 72272674 -68044091 - L1M4b LINE L1 -6271 588 384 775 266 224 64 chr10 72272887 72273865 -68042900 + L1MCa LINE L1 49 1182 -5244 401 293 224 57 chr10 72275505 72275976 -68040789 + L1MCa LINE L1 1323 2009 -4444 180 303 62 76 chr10 72276828 72276973 -68039792 + MIR3 SINE MIR 4 146 -62 908 209 6 6 chr10 72280033 72280215 -68036550 - MER5A DNA MER1_type -7 182 1 286 331 45 15 chr10 72280504 72280637 -68036128 + MIR3 SINE MIR 24 160 -48 230 320 73 56 chr10 72280654 72280832 -68035933 - L2 LINE L2 -16 3256 3076 323 210 0 0 chr10 72280967 72281029 -68035736 - L1MA3 LINE L1 -6 6299 6238 198 255 0 0 chr10 72281174 72281221 -68035544 + MER5B DNA MER1_type 51 97 -81 1599 190 83 11 chr10 72281862 72282235 -68034530 - LTR56 LTR ERV1 0 445 46 1801 97 0 0 chr10 72282237 72282475 -68034290 - AluSx SINE Alu -23 289 52 258 167 0 19 chr10 72282498 72282552 -68034213 - LTR56 LTR ERV1 -384 61 9 213 175 206 16 chr10 72282965 72283028 -68033737 + MIR SINE MIR 49 123 -85 2088 120 0 0 chr10 72284151 72284442 -68032323 + AluSx SINE Alu 2 292 -20 322 316 70 0 chr10 72284462 72284576 -68032189 + MIR SINE MIR 3 124 -138 248 264 264 14 chr10 72285061 72285209 -68031556 - MIR3 SINE MIR -23 185 1 526 311 80 21 chr10 72285266 72285555 -68031210 + MER102b DNA MER1_type 14 319 -22 225 182 55 0 chr10 72286403 72286458 -68030307 + CT-rich Low_complexity Low_complexity 4 61 0 1825 132 38 0 chr10 72286646 72286933 -68029832 + AluSx SINE Alu 1 298 -14 557 239 161 0 chr10 72287027 72287182 -68029583 - MIR SINE MIR -71 191 12 516 193 44 9 chr10 72287195 72287309 -68029456 + L1ME4a LINE L1 6002 6119 -2 330 354 31 6 chr10 72288198 72288359 -68028406 + L1MC4a LINE L1 5728 5892 -1916 1964 142 0 0 chr10 72288427 72288723 -68028042 - AluSx SINE Alu -16 296 1 21 36 0 0 chr10 72288732 72288760 -68028005 + AT_rich Low_complexity Low_complexity 1 28 0 1731 168 40 0 chr10 72288997 72289294 -68027471 + AluSx SINE Alu 4 312 0 1910 145 7 0 chr10 72289547 72289851 -68026914 + AluSx SINE Alu 1 306 -6 182 171 0 0 chr10 72289986 72290021 -68026744 - L2 LINE L2 -26 3246 3212 568 183 33 0 chr10 72291336 72291456 -68025309 + Charlie5 DNA MER1_type 1 124 -2488 1021 193 69 69 chr10 72291457 72291581 -68025184 + Charlie5 DNA MER1_type 2235 2358 -266 1772 134 17 27 chr10 72291581 72291879 -68024886 + AluJo SINE Alu 1 295 -17 1021 193 69 69 chr10 72291879 72292132 -68024633 + Charlie5 DNA MER1_type 2357 2612 -12 426 339 123 0 chr10 72292132 72292327 -68024438 - L1M4 LINE L1 -2825 3321 3103 233 369 20 0 chr10 72292327 72292525 -68024240 - L1M4 LINE L1 -2386 3760 3559 191 195 0 0 chr10 72293485 72293526 -68023239 + MIR SINE MIR 80 120 -142 2318 112 0 0 chr10 72293704 72294016 -68022749 + AluSx SINE Alu 1 312 0 327 306 82 20 chr10 72294590 72294737 -68022028 + MIR3 SINE MIR 6 161 -47 298 312 21 0 chr10 72295198 72295291 -68021474 - L2 LINE L2 -11 3302 3208 674 180 31 68 chr10 72295603 72295764 -68021001 - LTR32 LTR ERVL 0 471 317 1938 145 32 0 chr10 72295865 72296175 -68020590 - LTR32 LTR ERVL -137 334 15 560 304 54 5 chr10 72296175 72296379 -68020386 - MIR SINE MIR -35 227 14 2169 151 24 14 chr10 72296647 72297018 -68019747 + THE1C LTR MaLR 1 375 0 763 199 31 106 chr10 72297158 72297384 -68019381 - MER63A DNA MER1_type -1 209 1 1172 289 59 53 chr10 72297384 72297978 -68018787 + L1MEc LINE L1 839 1441 -4955 2652 240 20 11 chr10 72297978 72298540 -68018225 + MLT1F1 LTR MaLR 1 567 0 1172 289 59 53 chr10 72298540 72298884 -68017881 + L1MEc LINE L1 1441 1782 -4614 2032 86 10 54 chr10 72298956 72299270 -68017495 - AluSg SINE Alu -10 300 1 1580 210 59 3 chr10 72299282 72300090 -68016675 + L1MEc LINE L1 12 880 -5516 1715 180 133 29 chr10 72300219 72300300 -68016465 + MER44D DNA MER2_type 1 72 -2415 2098 99 7 10 chr10 72300300 72300602 -68016163 + AluSx SINE Alu 1 301 -11 1715 180 133 29 chr10 72300602 72300931 -68015834 + MER44D DNA MER2_type 72 509 -96 1309 172 83 65 chr10 72300931 72301050 -68015715 + MER2 DNA MER2_type 2 117 -228 5603 135 32 19 chr10 72301050 72301961 -68014804 + MER49 LTR ERV1 1 923 0 1309 172 83 65 chr10 72301961 72302178 -68014587 + MER2 DNA MER2_type 117 344 -1 449 212 24 0 chr10 72302179 72302264 -68014501 + MER44D DNA MER2_type 523 609 0 1192 229 9 4 chr10 72302264 72302534 -68014231 + L1ME2 LINE L1 5901 6334 0 2813 171 45 13 chr10 72302866 72303307 -68013458 - MER44D DNA MER2_type -1884 603 86 1264 164 24 133 chr10 72303307 72303637 -68013128 + AluJb SINE Alu 1 294 -18 2813 171 45 13 chr10 72303637 72303726 -68013039 - MER44D DNA MER2_type -2401 86 1 201 321 94 13 chr10 72304876 72305028 -68011737 + MIR SINE MIR 25 186 -76 706 176 34 27 chr10 72305212 72305360 -68011405 - Tigger7 DNA MER2_type -2338 149 1 222 345 23 0 chr10 72305418 72305505 -68011260 + MIR SINE MIR 139 227 -35 2482 183 33 68 chr10 72305521 72306095 -68010670 + MLT2B3 LTR ERVL 1 554 0 186 306 68 34 chr10 72306674 72306821 -68009944 + L2 LINE L2 2899 3050 -263 376 226 36 0 chr10 72306919 72307003 -68009762 - MER45A DNA AcHobo 0 178 92 2221 125 27 11 chr10 72307003 72307378 -68009387 + L1MC3 LINE L1 7391 7771 -14 1239 86 114 0 chr10 72307642 72307852 -68008913 + L1MB7 LINE L1 5897 6130 -54 2121 117 0 3 chr10 72307867 72308175 -68008590 - AluSx SINE Alu -5 307 1 234 118 0 0 chr10 72308183 72308217 -68008548 + MIR SINE MIR 211 244 -18 426 305 92 0 chr10 72308667 72308831 -68007934 - MIR SINE MIR -64 198 20 281 368 18 0 chr10 72309071 72309185 -68007580 - L2 LINE L2 0 3272 3157 218 300 0 0 chr10 72310208 72310278 -68006487 + (TG)n Simple_repeat Simple_repeat 1 70 0 675 236 31 0 chr10 72310711 72310872 -68005893 + MIR SINE MIR 65 230 -32 439 258 45 19 chr10 72311081 72311236 -68005529 - MIR SINE MIR -59 203 45 23 0 0 0 chr10 72311776 72311799 -68004966 + GC_rich Low_complexity Low_complexity 1 23 0 2243 73 0 13 chr10 72312184 72312484 -68004281 + AluY SINE Alu 1 296 -15 351 289 25 38 chr10 72312490 72312649 -68004116 + MIR3 SINE MIR 9 165 -43 363 234 73 48 chr10 72312739 72312863 -68003902 - MIR SINE MIR -129 133 7 193 276 151 59 chr10 72313287 72313439 -68003326 - L2 LINE L2 -49 3264 3099 360 309 93 0 chr10 72315458 72315597 -68001168 - MIR SINE MIR -79 183 32 574 252 26 13 chr10 72315725 72315876 -68000889 - MIR SINE MIR -40 222 70 245 244 0 51 chr10 72316301 72316379 -68000386 - MIR SINE MIR -74 134 61 227 294 63 24 chr10 72316648 72316774 -67999991 + MIR3 SINE MIR 58 188 -20 420 323 31 6 chr10 72318528 72318699 -67998066 - MIR SINE MIR -19 189 9 728 253 12 0 chr10 72319429 72319595 -67997170 - MER3 DNA MER1_type -87 122 2 185 333 111 20 chr10 72321335 72321434 -67995331 + MIR SINE MIR 42 149 -59 339 310 38 87 chr10 72322100 72322480 -67994285 + L1MC/D LINE L1 5235 5595 -749 237 132 0 0 chr10 72324690 72324728 -67992037 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 527 324 11 0 chr10 72324797 72324973 -67991792 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 285 272 37 0 chr10 72326869 72326950 -67989815 + MIR SINE MIR 37 120 -88 262 0 0 0 chr10 72327130 72327159 -67989606 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 2096 124 3 0 chr10 72327159 72327441 -67989324 - AluSx SINE Alu -29 283 1 409 257 74 57 chr10 72327464 72327639 -67989126 - MIR SINE MIR -56 206 29 2427 94 3 0 chr10 72328333 72328641 -67988124 + AluSg1 SINE Alu 1 309 0 303 371 13 7 chr10 72328668 72328819 -67987946 + L3 LINE CR1 1352 1503 -74 305 232 146 62 chr10 72329187 72329366 -67987399 - MIR3 SINE MIR 0 208 20 640 311 32 40 chr10 72329799 72329968 -67986797 + MIR SINE MIR 2 170 -92 1663 226 140 8 chr10 72329968 72330481 -67986284 + MER119 DNA MER1_type 3 583 0 640 311 32 40 chr10 72330481 72330559 -67986206 + MIR SINE MIR 170 247 -15 2186 117 0 0 chr10 72330696 72330986 -67985779 - AluSx SINE Alu -22 290 1 281 287 25 64 chr10 72331954 72332111 -67984654 + MIR3 SINE MIR 1 151 -57 690 290 39 13 chr10 72332259 72332490 -67984275 + MIR SINE MIR 20 256 -6 217 276 118 0 chr10 72332498 72332574 -67984191 - MIR SINE MIR -9 253 169 298 269 55 62 chr10 72334246 72334391 -67982374 + MIR SINE MIR 13 156 -106 22 0 0 0 chr10 72334646 72334668 -67982097 + AT_rich Low_complexity Low_complexity 1 22 0 405 230 24 63 chr10 72335655 72335781 -67980984 - MIR3 SINE MIR -49 159 39 242 308 132 35 chr10 72335852 72336079 -67980686 + MIR SINE MIR 12 260 -2 216 200 0 0 chr10 72336339 72336384 -67980381 + A-rich Low_complexity Low_complexity 1 45 0 306 125 0 0 chr10 72336447 72336495 -67980270 + (TG)n Simple_repeat Simple_repeat 1 48 0 351 297 10 0 chr10 72338097 72338198 -67978567 + MIR SINE MIR 33 134 -74 189 107 0 0 chr10 72338684 72338712 -67978053 + (CGTG)n Simple_repeat Simple_repeat 4 31 0 24 32 0 0 chr10 72339236 72339267 -67977498 + AT_rich Low_complexity Low_complexity 1 31 0 365 287 19 0 chr10 72339377 72339485 -67977280 - MIR3 SINE MIR -21 187 78 354 209 36 122 chr10 72339761 72339900 -67976865 + MER91B DNA MER1_type 4 130 -60 355 250 52 9 chr10 72340134 72340250 -67976515 - MER103 DNA DNA -45 121 1 294 307 10 10 chr10 72340898 72340999 -67975766 + MIR3 SINE MIR 99 199 -9 214 275 12 25 chr10 72341244 72341324 -67975441 + L3b LINE CR1 1294 1372 -211 346 268 29 36 chr10 72341545 72341683 -67975082 - MLT1G1 LTR MaLR -194 336 200 1012 240 9 0 chr10 72341685 72341902 -67974863 - MLT1G1 LTR MaLR -374 221 3 571 226 7 7 chr10 72341903 72342040 -67974725 - L1MEc LINE L1 -2246 3969 3833 583 254 8 0 chr10 72342043 72342161 -67974604 + FLAM_C SINE Alu 2 120 -23 372 43 0 0 chr10 72342161 72342207 -67974558 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 339 230 9 0 chr10 72342215 72342328 -67974437 - L1MEc LINE L1 -2373 3842 3729 433 316 46 29 chr10 72342350 72342657 -67974108 - L1MEc LINE L1 -3940 2456 2145 596 325 90 6 chr10 72342914 72343225 -67973540 - L1MEc LINE L1 -4579 1817 1481 233 259 0 0 chr10 72344098 72344152 -67972613 - L1MEc LINE L1 -5557 839 786 582 308 44 6 chr10 72345286 72345468 -67971297 - MIR SINE MIR -56 206 18 558 335 151 9 chr10 72345601 72345938 -67970827 + L3 LINE CR1 1192 1576 -1 350 237 178 50 chr10 72346382 72346601 -67970164 + Charlie8 DNA MER1_type 34 280 -2137 226 293 24 0 chr10 72346686 72346768 -67969997 + Charlie8 DNA MER1_type 378 461 -1956 1781 161 23 20 chr10 72347583 72347882 -67968883 - AluJo SINE Alu -12 300 1 264 59 0 0 chr10 72348076 72348110 -67968655 + (CACCAT)n Simple_repeat Simple_repeat 5 38 0 241 250 0 0 chr10 72348356 72348416 -67968349 - L3 LINE CR1 -220 1357 1298 242 297 99 20 chr10 72348442 72348543 -67968222 - L2 LINE L2 0 3272 3164 372 324 18 63 chr10 72348718 72348940 -67967825 + L1MC4 LINE L1 7826 8037 -5 564 294 108 16 chr10 72349502 72349696 -67967069 - MIR SINE MIR -1 261 50 415 294 104 59 chr10 72350231 72350588 -67966177 + L1ME3A LINE L1 1282 1621 -5501 1718 194 3 0 chr10 72350588 72350881 -67965884 + AluJb SINE Alu 1 294 -18 415 294 104 59 chr10 72350881 72351120 -67965645 + L1ME3A LINE L1 1621 1848 -5274 2427 92 0 13 chr10 72351120 72351436 -67965329 + AluSx SINE Alu 1 312 0 415 294 104 59 chr10 72351436 72351658 -67965107 + L1ME3A LINE L1 1848 2352 -4770 1107 152 6 12 chr10 72351658 72351829 -67964936 + FRAM SINE Alu 1 163 -13 526 313 238 12 chr10 72351829 72352165 -67964600 + L1ME3A LINE L1 2362 2773 -4349 2001 104 0 0 chr10 72352171 72352422 -67964343 + AluSx SINE Alu 1 251 -61 6027 234 69 32 chr10 72352422 72353103 -67963662 + L1MB4 LINE L1 3357 4012 -2963 1526 202 62 0 chr10 72353103 72353395 -67963370 + AluJo SINE Alu 1 310 -2 6027 234 69 32 chr10 72353395 72354411 -67962354 + L1MB4 LINE L1 4012 4990 -1985 333 0 0 0 chr10 72354411 72354448 -67962317 + (CA)n Simple_repeat Simple_repeat 2 38 0 6027 234 69 32 chr10 72354448 72354663 -67962102 + L1MB4 LINE L1 4990 5196 -1779 667 201 0 43 chr10 72354663 72354802 -67961963 + FLAM_A SINE Alu 1 133 0 6027 234 69 32 chr10 72354802 72355711 -67961054 + L1MB4 LINE L1 5196 6071 -904 689 171 5 131 chr10 72355711 72355910 -67960855 + FAM SINE Alu 1 174 -1 6027 234 69 32 chr10 72355910 72356600 -67960165 + L1MB4 LINE L1 6071 6975 0 1575 252 70 34 chr10 72356601 72357396 -67959369 + L1ME3A LINE L1 4769 5592 -1349 1330 239 119 11 chr10 72357401 72357862 -67958903 + L1ME3A LINE L1 6450 6960 -5 617 206 26 45 chr10 72358183 72358338 -67958427 - MIR SINE MIR -82 180 29 240 35 0 0 chr10 72359939 72359968 -67956797 + (TC)n Simple_repeat Simple_repeat 2 30 0 313 280 50 20 chr10 72360031 72360131 -67956634 + L2 LINE L2 3201 3303 -10 271 180 20 0 chr10 72360442 72360492 -67956273 - MIR SINE MIR -61 147 97 183 329 0 14 chr10 72360758 72360828 -67955937 - MIR3 SINE MIR -40 168 100 268 316 32 0 chr10 72361061 72361156 -67955609 + MIR SINE MIR 56 153 -55 885 281 18 0 chr10 72361195 72361419 -67955346 + MIR SINE MIR 35 262 0 357 247 0 0 chr10 72361527 72361604 -67955161 + L2 LINE L2 3236 3312 -1 457 286 58 29 chr10 72361604 72361810 -67954955 + Charlie8 DNA MER1_type 47 258 -2159 888 144 0 0 chr10 72362194 72362319 -67954446 + AluJb SINE Alu 173 297 -15 472 180 11 0 chr10 72362319 72362408 -67954357 + Charlie5 DNA MER1_type 2533 2622 0 2316 112 0 13 chr10 72362600 72362905 -67953860 + AluSx SINE Alu 1 301 -11 234 182 0 36 chr10 72363319 72363374 -67953391 + CT-rich Low_complexity Low_complexity 4 56 0 293 284 57 11 chr10 72363754 72363842 -67952923 + MIR3 SINE MIR 90 181 -27 231 211 18 0 chr10 72363854 72363911 -67952854 - Charlie8 DNA MER1_type -4 2413 2356 635 244 17 28 chr10 72364027 72364207 -67952558 + L1ME3 LINE L1 5964 6141 -21 296 53 0 0 chr10 72364222 72364284 -67952481 - Alu SINE Alu 0 306 245 689 176 0 0 chr10 72364434 72364565 -67952200 - AluY SINE Alu -179 132 2 246 81 0 0 chr10 72364657 72364694 -67952071 + (CA)n Simple_repeat Simple_repeat 1 37 0 344 273 115 10 chr10 72364811 72364991 -67951774 - MIR SINE MIR 0 262 62 354 250 81 14 chr10 72365540 72365688 -67951077 - L1ME3A LINE L1 -72 6098 5941 21 36 0 0 chr10 72366562 72366590 -67950175 + AT_rich Low_complexity Low_complexity 1 28 0 2081 133 3 0 chr10 72366600 72366885 -67949880 - AluSx SINE Alu -26 286 1 943 189 0 11 chr10 72367608 72367783 -67948982 - FAM SINE Alu -1 174 2 634 151 0 0 chr10 72368097 72368203 -67948562 - MER5A DNA MER1_type -80 109 4 432 0 0 0 chr10 72368926 72368974 -67947791 + (CA)n Simple_repeat Simple_repeat 2 49 0 296 377 45 0 chr10 72370347 72370501 -67946264 - L3 LINE CR1 -2 1575 1415 263 312 21 11 chr10 72370551 72370644 -67946121 - L3 LINE CR1 -343 1234 1141 356 296 127 11 chr10 72370668 72370857 -67945908 - MIR SINE MIR -35 227 17 215 61 30 0 chr10 72370857 72370890 -67945875 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 542 290 121 48 chr10 72370896 72371186 -67945579 - L2 LINE L2 -32 3240 2930 375 169 0 0 chr10 72371537 72371602 -67945163 + AluJ/FLAM SINE Alu 1 65 -237 747 261 51 9 chr10 72371729 72371944 -67944821 + MER58A DNA MER1_type 1 224 0 255 157 0 0 chr10 72371977 72372028 -67944737 + (CA)n Simple_repeat Simple_repeat 2 52 0 448 302 100 21 chr10 72372075 72372406 -67944359 - L2 LINE L2 -688 2626 2270 379 315 36 18 chr10 72372450 72372615 -67944150 + MIR3 SINE MIR 28 195 -13 428 213 148 0 chr10 72372701 72372856 -67943909 - LTR33A LTR ERVL -84 439 262 380 280 78 89 chr10 72373066 72373359 -67943406 - L2 LINE L2 -59 3213 2924 283 247 67 11 chr10 72373733 72373822 -67942943 + MIR SINE MIR 70 163 -99 290 287 77 28 chr10 72374218 72374361 -67942404 + LTR67 LTR ERVL 408 557 0 193 196 65 0 chr10 72374587 72374633 -67942132 + L2 LINE L2 3148 3196 -76 * 358 321 62 76 chr10 72374629 72375052 -67941713 - L2 LINE L2 -1 3271 2855 180 255 19 113 chr10 72375555 72375661 -67941104 + MIR SINE MIR 117 212 -50 236 256 8 77 chr10 72376661 72376778 -67939987 - MIR3 SINE MIR -21 187 79 656 275 50 42 chr10 72376801 72377041 -67939724 - MIR SINE MIR -1 261 20 328 239 176 57 chr10 72377052 72377211 -67939554 - MER5B DNA MER1_type 0 178 1 366 260 10 0 chr10 72377248 72377344 -67939421 + MIR SINE MIR 49 145 -117 500 267 205 26 chr10 72377348 72377543 -67939222 + MIR SINE MIR 19 248 -14 273 221 15 0 chr10 72377760 72377828 -67938937 - L1ME4a LINE L1 -100 6021 5953 284 268 226 21 chr10 72377935 72378170 -67938595 + L1MEc LINE L1 1703 1985 -4411 225 310 43 9 chr10 72378373 72378489 -67938276 - L1ME4a LINE L1 -1897 5911 5792 460 281 0 0 chr10 72378494 72378590 -67938175 - MER45 DNA AcHobo -944 96 1 1076 231 64 52 chr10 72379014 72379284 -67937481 - MER113 DNA MER1_type? -85 436 158 1993 85 0 19 chr10 72379284 72379544 -67937221 + AluY SINE Alu 40 294 -17 1076 231 64 52 chr10 72379544 72379697 -67937068 - MER113 DNA MER1_type? -363 158 8 180 250 61 145 chr10 72379997 72380293 -67936472 + L2 LINE L2 2917 3187 -85 282 293 26 35 chr10 72380303 72380419 -67936346 + MIR SINE MIR 30 144 -64 531 182 9 18 chr10 72380523 72380633 -67936132 - MIR SINE MIR -46 216 108 441 237 75 122 chr10 72380634 72380996 -67935769 - MLT1J2 LTR MaLR 0 419 66 2509 83 3 0 chr10 72381330 72381630 -67935135 - AluSp SINE Alu -12 301 1 1189 67 0 0 chr10 72381630 72381765 -67935000 - AluSg SINE Alu -175 135 1 292 315 94 8 chr10 72381769 72381896 -67934869 - MIR SINE MIR -48 214 77 985 239 5 5 chr10 72382381 72382586 -67934179 + AluJb SINE Alu 108 312 0 434 217 33 50 chr10 72382640 72382760 -67934005 + MIR SINE MIR 30 147 -61 515 225 36 22 chr10 72382787 72382925 -67933840 + MIR SINE MIR 33 172 -90 2222 129 0 3 chr10 72382926 72383229 -67933536 - AluSx SINE Alu -10 302 1 231 195 26 78 chr10 72383584 72383661 -67933104 - MER91B DNA MER1_type -117 73 1 257 135 0 39 chr10 72383896 72383948 -67932817 + MIR SINE MIR 101 150 -112 319 283 193 24 chr10 72384245 72384411 -67932354 - MIR SINE MIR -21 241 48 433 314 26 7 chr10 72384463 72384616 -67932149 - MIR SINE MIR -4 258 103 393 58 0 0 chr10 72385001 72385053 -67931712 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 614 221 81 59 chr10 72385145 72385209 -67931556 + L1MC5 LINE L1 7640 7701 -260 1380 146 75 8 chr10 72385209 72385477 -67931288 - L1MC1 LINE L1 0 6333 6048 614 221 81 59 chr10 72385477 72385684 -67931081 + L1MC5 LINE L1 7701 7917 -44 292 217 14 29 chr10 72386153 72386222 -67930543 - MIR SINE MIR -60 148 81 2038 184 53 59 chr10 72386817 72387329 -67929436 - LTR54 LTR ERV1 0 510 2 207 349 111 24 chr10 72387439 72387565 -67929200 + MIR SINE MIR 90 226 -36 917 241 14 14 chr10 72387631 72387847 -67928918 - LTR16C LTR ERVL -2 489 274 806 205 32 32 chr10 72387847 72388032 -67928733 - MER5A DNA MER1_type -2 187 3 520 289 64 6 chr10 72388036 72388192 -67928573 - LTR16C LTR ERVL -220 271 107 309 179 0 0 chr10 72388329 72388385 -67928380 + MER69 DNA AcHobo 83 138 -2388 * 681 129 37 80 chr10 72388364 72388527 -67928238 + MER69 DNA AcHobo 2368 2523 -3 324 313 168 24 chr10 72388594 72388802 -67927963 + MIR SINE MIR 18 255 -7 1953 95 39 42 chr10 72389514 72389833 -67926932 + AluSq SINE Alu 1 318 0 591 141 7 15 chr10 72389833 72389975 -67926790 + LTR24 LTR ERV1 325 467 0 233 223 155 29 chr10 72390139 72390242 -67926523 - MIR SINE MIR -130 132 17 544 272 60 18 chr10 72390896 72391326 -67925439 + MER113 DNA MER1_type? 40 517 -4 2035 108 34 0 chr10 72392747 72393016 -67923749 - AluSx SINE Alu -34 278 1 464 296 54 60 chr10 72393022 72393353 -67923412 + L2 LINE L2 2856 3184 -129 239 264 147 16 chr10 72393587 72393716 -67923049 - MIR3 SINE MIR -30 178 33 240 260 26 0 chr10 72394616 72394693 -67922072 - MIR SINE MIR -60 148 70 340 294 17 8 chr10 72395104 72395223 -67921542 - MIR3 SINE MIR -84 124 5 258 32 0 0 chr10 72395383 72395414 -67921351 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 904 243 80 16 chr10 72396128 72396606 -67920159 - MER115 DNA AcHobo -23 670 89 269 200 0 0 chr10 72396698 72396753 -67920012 - MIR SINE MIR -97 165 111 905 178 12 0 chr10 72397672 72397835 -67918930 + MER5A DNA MER1_type 1 165 -24 427 264 42 36 chr10 72397690 72397857 -67918908 - MER5A DNA MER1_type -4 185 18 * 398 243 295 6 chr10 72397873 72398046 -67918719 + MIR SINE MIR 34 256 -6 1005 198 15 5 chr10 72398456 72398658 -67918107 - MIR SINE MIR -51 211 8 341 207 24 0 chr10 72399088 72399170 -67917595 + L1MA4 LINE L1 6060 6143 -157 892 141 0 22 chr10 72399177 72399291 -67917474 + FLAM_C SINE Alu 1 113 -199 597 224 11 0 chr10 72399291 72399474 -67917291 + L1MA4 LINE L1 6111 6295 -5 892 141 0 22 chr10 72399474 72399494 -67917271 + FLAM_C SINE Alu 113 132 -180 296 93 37 0 chr10 72399494 72399548 -67917217 + Charlie1 DNA MER1_type 2501 2556 -205 22 0 0 30 chr10 72399548 72399559 -67917206 + AT_rich Low_complexity Low_complexity 1 11 -21 1056 153 0 0 chr10 72399559 72399722 -67917043 + FAM SINE Alu 1 163 -12 22 0 0 30 chr10 72399722 72399743 -67917022 + AT_rich Low_complexity Low_complexity 11 32 0 331 104 0 0 chr10 72400435 72400483 -67916282 + MIR SINE MIR 102 149 -113 1348 204 91 23 chr10 72400653 72400961 -67915804 - MLT-int LTR MaLR -1069 666 338 1965 169 11 11 chr10 72400961 72401316 -67915449 - MLT1A1 LTR MaLR 0 365 11 523 303 69 23 chr10 72401322 72401540 -67915225 - MIR SINE MIR -33 229 2 391 275 137 39 chr10 72401910 72402004 -67914761 - MIR SINE MIR -6 256 173 2001 143 0 38 chr10 72402004 72402319 -67914446 - AluJo SINE Alu -9 303 1 391 275 137 39 chr10 72402319 72402457 -67914308 - MIR SINE MIR -89 173 1 301 236 117 5 chr10 72402821 72402951 -67913814 - MIR SINE MIR -62 146 4 498 127 0 0 chr10 72403772 72403843 -67912922 + AluJb SINE Alu 2 72 -240 936 191 17 0 chr10 72403848 72404021 -67912744 - MLT-int LTR MaLR -1198 537 362 1358 162 0 45 chr10 72404037 72404284 -67912481 + AluJb SINE Alu 77 312 0 2362 108 0 6 chr10 72404992 72405306 -67911459 - AluSq SINE Alu -1 312 1 662 83 0 0 chr10 72406359 72406455 -67910310 + AluSg/x SINE Alu 215 310 0 2067 130 0 41 chr10 72406482 72406798 -67909967 + AluJo SINE Alu 1 303 -9 1611 166 10 76 chr10 72408793 72409127 -67907638 + AluJo SINE Alu 1 314 0 746 309 46 4 chr10 72409414 72409676 -67907089 - L1ME LINE L1 -316 5805 5533 184 293 121 83 chr10 72409684 72409828 -67906937 + L2 LINE L2 3055 3207 -106 2166 129 3 0 chr10 72409828 72410123 -67906642 + AluSx SINE Alu 17 312 0 184 293 121 83 chr10 72410123 72410135 -67906630 + L2 LINE L2 3207 3217 -96 242 231 92 0 chr10 72410325 72410390 -67906375 + MIR SINE MIR 78 148 -60 373 219 31 0 chr10 72410460 72410556 -67906209 + MIR SINE MIR 49 147 -61 2082 136 7 13 chr10 72411044 72411354 -67905411 + AluJb SINE Alu 3 310 -2 471 268 9 0 chr10 72411443 72411555 -67905210 - MER81 DNA DNA 0 114 2 278 344 25 25 chr10 72412105 72412268 -67904497 + MIR SINE MIR 61 223 -39 296 253 75 41 chr10 72412321 72412467 -67904298 + MIR SINE MIR 60 210 -52 203 220 17 51 chr10 72412647 72412706 -67904059 + MIR SINE MIR 60 116 -146 1718 158 7 45 chr10 72412706 72412830 -67903935 + AluJb SINE Alu 2 129 -183 2444 72 0 3 chr10 72412830 72413123 -67903642 - AluY SINE Alu -19 292 1 1718 158 7 45 chr10 72413123 72413290 -67903475 + AluJb SINE Alu 129 282 -30 217 240 20 0 chr10 72413306 72413356 -67903409 + MIR SINE MIR 102 152 -110 1817 143 19 19 chr10 72413402 72413709 -67903056 - AluJo SINE Alu -3 309 3 240 214 18 0 chr10 72414790 72414846 -67901919 + (CA)n Simple_repeat Simple_repeat 2 58 0 420 273 129 17 chr10 72414976 72415178 -67901587 + MIR SINE MIR 30 252 -10 1011 266 13 0 chr10 72415860 72416097 -67900668 + MIR SINE MIR 7 246 -16 397 302 94 0 chr10 72417052 72417201 -67899564 + MER117 DNA MER1_type 1 163 -34 193 206 175 16 chr10 72417620 72417683 -67899082 + L2 LINE L2 3148 3220 -52 216 189 36 36 chr10 72417699 72417810 -67898955 + GA-rich Low_complexity Low_complexity 4 114 0 1291 275 122 28 chr10 72417835 72418337 -67898428 + MLT1G1 LTR MaLR 4 552 -43 447 351 44 0 chr10 72418783 72419011 -67897754 + MIR SINE MIR 8 245 -17 465 306 123 30 chr10 72419245 72419480 -67897285 - MIR SINE MIR -4 258 2 324 0 0 0 chr10 72419905 72419941 -67896824 + (CA)n Simple_repeat Simple_repeat 2 37 0 309 264 82 9 chr10 72420077 72420187 -67896578 - MIR SINE MIR -75 133 16 281 326 0 12 chr10 72420210 72420296 -67896469 - L2 LINE L2 -6 3307 3223 288 331 123 23 chr10 72420702 72420962 -67895803 + MLT1K LTR MaLR 149 434 -154 1068 257 113 0 chr10 72421172 72421472 -67895293 + LTR16C LTR ERVL 156 489 -2 574 280 25 0 chr10 72421743 72421900 -67894865 + MIR3 SINE MIR 23 183 -25 252 231 231 0 chr10 72422018 72422109 -67894656 + L2 LINE L2 3161 3272 0 1630 157 0 22 chr10 72423569 72423836 -67892929 - AluJo SINE Alu -51 261 1 299 286 84 45 chr10 72423837 72423991 -67892774 + MIR SINE MIR 63 222 -40 556 259 84 7 chr10 72424683 72424865 -67891900 + MLT1G1 LTR MaLR 47 256 -334 392 221 188 20 chr10 72424906 72425055 -67891710 + MLT1G1 LTR MaLR 363 536 -6 442 256 56 0 chr10 72425132 72425257 -67891508 - MER117 DNA MER1_type -34 163 32 915 128 0 0 chr10 72426454 72426579 -67890186 - FLAM_C SINE Alu -10 133 9 1788 149 52 3 chr10 72426987 72427275 -67889490 + AluJo SINE Alu 1 302 -10 1940 231 106 4 chr10 72428092 72428630 -67888135 + MLT1E LTR MaLR 1 593 0 343 296 41 0 chr10 72429846 72429944 -67886821 - MER91C DNA MER1_type -2 138 37 302 256 17 0 chr10 72431070 72431153 -67885612 - MIR SINE MIR -61 147 81 2095 126 3 3 chr10 72431477 72431778 -67884987 - AluSx SINE Alu -11 301 1 222 306 78 44 chr10 72433561 72433767 -67882998 + L2 LINE L2 1594 1806 -1508 738 205 130 13 chr10 72433904 72434143 -67882622 + MLT1C LTR MaLR 7 273 -194 298 182 0 0 chr10 72434179 72434234 -67882531 + MLT1C LTR MaLR 413 467 0 266 293 40 0 chr10 72435188 72435263 -67881502 - L2 LINE L2 0 3313 3236 204 40 0 0 chr10 72435281 72435306 -67881459 + (A)n Simple_repeat Simple_repeat 1 25 0 233 289 77 10 chr10 72435393 72435497 -67881268 - L2 LINE L2 -311 2961 2851 496 297 159 0 chr10 72435625 72435807 -67880958 - L2 LINE L2 0 3313 3103 629 253 32 16 chr10 72435883 72436073 -67880692 + MER58A DNA MER1_type 21 213 -11 207 321 86 0 chr10 72436123 72436204 -67880561 - MIR3 SINE MIR -111 97 10 2113 107 10 13 chr10 72437807 72438153 -67878612 + AluSx SINE Alu 5 349 0 215 319 167 14 chr10 72438260 72438398 -67878367 + MER5A DNA MER1_type 18 176 -13 233 265 118 0 chr10 72438420 72438488 -67878277 + MIR SINE MIR 73 148 -114 328 210 12 25 chr10 72438531 72438612 -67878153 - MER112 DNA MER1_type -2 258 179 944 244 178 38 chr10 72438636 72439086 -67877679 + L2 LINE L2 1490 2002 -1312 474 297 95 22 chr10 72439218 72439450 -67877315 + MIR SINE MIR 5 253 -9 247 164 33 49 chr10 72439451 72439512 -67877253 + MIR SINE MIR 189 248 -14 371 284 100 37 chr10 72440316 72440506 -67876259 - L3b LINE CR1 -131 1452 1251 692 141 0 74 chr10 72440515 72440650 -67876115 - FLAM_A SINE Alu -8 125 1 284 245 138 0 chr10 72440659 72440753 -67876012 + MER5B DNA MER1_type 5 111 -67 1122 119 0 0 chr10 72440770 72440929 -67875836 - AluSg/x SINE Alu -4 306 148 315 120 0 20 chr10 72440936 72440986 -67875779 + MER5B DNA MER1_type 122 170 -8 341 311 112 0 chr10 72441011 72441179 -67875586 + MIR SINE MIR 22 209 -53 334 267 52 17 chr10 72441720 72441836 -67874929 + MIR SINE MIR 126 245 -17 374 317 126 16 chr10 72442631 72442814 -67873951 + MIR SINE MIR 57 259 -3 444 251 10 103 chr10 72443883 72444034 -67872731 - MIR SINE MIR -1 261 132 2180 109 0 10 chr10 72444034 72444338 -67872427 + AluJb SINE Alu 1 301 -11 444 251 10 103 chr10 72444338 72444389 -67872376 - MIR SINE MIR -130 132 78 354 250 104 0 chr10 72444450 72444546 -67872219 - MER5A DNA MER1_type -75 114 9 318 259 47 12 chr10 72444728 72444813 -67871952 + MER5B DNA MER1_type 42 129 -49 579 198 0 0 chr10 72444824 72444925 -67871840 - U13 snRNA snRNA -2 102 2 704 202 11 16 chr10 72445300 72445483 -67871282 + MER31B LTR ERV1 1 182 -284 748 251 87 0 chr10 72445493 72445712 -67871053 + MER8 DNA MER2_type 2 239 0 265 226 42 35 chr10 72445717 72445804 -67870961 + MER31A LTR ERV1 82 267 -218 858 172 137 10 chr10 72445806 72446010 -67870755 + MER8 DNA MER2_type 10 239 0 654 176 155 5 chr10 72446029 72446222 -67870543 + MER31B LTR ERV1 243 464 -2 190 326 50 21 chr10 72446344 72446485 -67870280 + L2 LINE L2 2855 2999 -273 1189 266 75 30 chr10 72446516 72446983 -67869782 + MLT1J LTR MaLR 15 502 -9 189 240 80 0 chr10 72447684 72447734 -67869031 - MIR3 SINE MIR -7 201 148 391 333 30 26 chr10 72447865 72448096 -67868669 + L1MC4a LINE L1 5800 6031 -1777 22 70 0 0 chr10 72448212 72448255 -67868510 + AT_rich Low_complexity Low_complexity 1 43 0 220 271 217 8 chr10 72448303 72448432 -67868333 - MIR SINE MIR -52 156 1 290 239 30 0 chr10 72448493 72448560 -67868205 + MIR SINE MIR 71 139 -123 210 318 71 48 chr10 72448972 72449098 -67867667 - MIR SINE MIR -61 201 73 563 296 69 14 chr10 72449105 72449339 -67867426 - MIR SINE MIR -3 259 14 211 213 0 21 chr10 72449435 72449482 -67867283 + L2 LINE L2 3226 3271 -1 825 175 26 6 chr10 72449709 72449888 -67866877 + MLT1A2 LTR MaLR 188 371 -19 21 0 0 0 chr10 72451023 72451044 -67865721 + GC_rich Low_complexity Low_complexity 1 21 0 2309 74 3 22 chr10 72451570 72451881 -67864884 + AluSx SINE Alu 1 305 -7 182 241 215 0 chr10 72452195 72452274 -67864491 + L2 LINE L2 3204 3299 -14 186 319 0 0 chr10 72452483 72452530 -67864235 + MIR SINE MIR 167 213 -49 449 213 41 107 chr10 72452658 72452827 -67863938 - MIR SINE MIR -51 211 54 2527 174 53 16 chr10 72453750 72454313 -67862452 - MER34C LTR ERV1 0 585 2 210 250 21 0 chr10 72454514 72454562 -67862203 + GA-rich Low_complexity Low_complexity 6 54 0 2071 104 6 49 chr10 72454632 72454959 -67861806 + AluSq SINE Alu 1 313 0 287 205 233 47 chr10 72455099 72455265 -67861500 + MIR SINE MIR 1 181 -27 570 264 26 7 chr10 72455366 72455521 -67861244 - MIR SINE MIR -77 185 28 1680 158 0 21 chr10 72455961 72456252 -67860513 - AluJo SINE Alu -20 292 8 269 369 145 17 chr10 72456267 72456730 -67860035 + L2 LINE L2 841 1362 -1952 438 287 64 0 chr10 72456876 72457033 -67859732 - L1ME3A LINE L1 -7 6163 5997 372 229 48 96 chr10 72457042 72457208 -67859557 - MLT1G LTR MaLR -24 566 409 206 325 37 30 chr10 72457607 72457711 -67859054 + MIR SINE MIR 69 145 -63 498 301 119 18 chr10 72458424 72458643 -67858122 - MIR SINE MIR -2 260 20 955 119 0 8 chr10 72458647 72458781 -67857984 - FLAM_C SINE Alu 0 133 1 639 211 63 0 chr10 72458807 72458949 -67857816 - MER5A DNA MER1_type 0 189 39 401 289 133 0 chr10 72459200 72459328 -67857437 + MIR SINE MIR 104 248 -14 265 299 221 8 chr10 72459380 72459507 -67857258 - MIR SINE MIR -62 200 47 487 183 67 17 chr10 72460317 72460437 -67856328 - MIR SINE MIR -62 146 21 353 309 118 29 chr10 72460530 72460776 -67855989 + L2 LINE L2 2958 3225 -88 313 293 130 0 chr10 72460976 72461099 -67855666 + L2 LINE L2 3175 3313 0 458 279 111 6 chr10 72461737 72461909 -67854856 - MIR SINE MIR -27 235 46 198 214 18 36 chr10 72462041 72462097 -67854668 - MIR3 SINE MIR -41 167 113 220 310 0 0 chr10 72462412 72462470 -67854295 - MIR SINE MIR -61 147 90 340 279 158 37 chr10 72463834 72464024 -67852741 + MIR SINE MIR 36 248 -14 322 185 31 0 chr10 72464064 72464129 -67852636 + MIR SINE MIR 74 140 -68 2085 133 13 0 chr10 72464216 72464524 -67852241 - AluSx SINE Alu 0 312 1 302 123 88 0 chr10 72464968 72465025 -67851740 + MIR SINE MIR 78 139 -69 324 264 55 11 chr10 72465459 72465550 -67851215 + MIR SINE MIR 78 172 -90 276 253 13 0 chr10 72465625 72465700 -67851065 + MIR SINE MIR 90 165 -97 196 269 0 19 chr10 72466132 72466184 -67850581 - MIR SINE MIR -118 144 94 186 318 94 12 chr10 72466297 72466382 -67850383 - MIR SINE MIR -69 193 102 496 234 9 0 chr10 72466748 72466859 -67849906 + MIR3 SINE MIR 48 159 -49 237 296 61 41 chr10 72467507 72467605 -67849160 + MIR SINE MIR 87 186 -76 455 291 189 19 chr10 72468325 72468696 -67848069 + L1ME4a LINE L1 5610 6043 -78 315 336 36 29 chr10 72469489 72469629 -67847136 + MIR3 SINE MIR 16 156 -52 657 235 34 34 chr10 72470908 72471087 -67845678 + MIR SINE MIR 83 261 -1 255 238 67 57 chr10 72471097 72471202 -67845563 + MIR SINE MIR 106 211 -51 212 345 46 0 chr10 72471388 72471475 -67845290 - MIR SINE MIR -63 145 55 278 331 31 71 chr10 72472448 72472529 -67844236 + MIR3 SINE MIR 76 152 -56 394 244 184 12 chr10 72472529 72472697 -67844068 - MER117 DNA MER1_type 0 197 1 278 331 31 71 chr10 72472697 72472742 -67844023 + MIR3 SINE MIR 152 197 -11 337 324 50 0 chr10 72472941 72473123 -67843642 - MER117 DNA MER1_type -6 191 1 279 0 0 0 chr10 72474734 72474765 -67842000 + (TG)n Simple_repeat Simple_repeat 1 31 0 234 62 0 0 chr10 72474765 72474797 -67841968 + (GA)n Simple_repeat Simple_repeat 2 33 0 187 222 0 123 chr10 72475603 72475684 -67841081 - MIR3 SINE MIR -48 160 90 211 250 0 0 chr10 72476286 72476334 -67840431 + L2 LINE L2 3014 3061 -211 218 103 0 26 chr10 72477024 72477063 -67839702 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 253 277 268 0 chr10 72478276 72478388 -67838377 - MER5A DNA MER1_type -11 178 37 236 281 0 16 chr10 72479171 72479235 -67837530 - L2 LINE L2 -3 3310 3248 197 323 121 30 chr10 72479475 72479574 -67837191 + L2 LINE L2 3205 3312 -1 765 286 80 5 chr10 72479592 72479816 -67836949 + MIR SINE MIR 20 260 -2 1058 215 72 0 chr10 72480087 72480282 -67836483 - MER3 DNA MER1_type 0 209 1 2112 108 3 10 chr10 72480376 72480683 -67836082 - AluSx SINE Alu -7 305 1 229 257 176 0 chr10 72481292 72481366 -67835399 + MIR SINE MIR 64 150 -112 469 261 52 8 chr10 72482467 72482601 -67834164 + MIR SINE MIR 99 238 -24 1001 149 7 0 chr10 72484576 72484730 -67832035 + FRAM SINE Alu 1 151 -25 1559 109 101 4 chr10 72484790 72485038 -67831727 + AluSx SINE Alu 24 295 -17 513 276 182 0 chr10 72485899 72486091 -67830674 - MIR SINE MIR -4 258 32 346 363 65 5 chr10 72486096 72486297 -67830468 - MIR SINE MIR -36 226 14 502 228 26 0 chr10 72487460 72487574 -67829191 - MIR SINE MIR -59 149 33 261 188 0 0 chr10 72488401 72488449 -67828316 + (CAGAGA)n Simple_repeat Simple_repeat 1 48 0 202 322 113 9 chr10 72488727 72488842 -67827923 + MIR SINE MIR 23 149 -113 351 214 31 107 chr10 72489286 72489435 -67827330 + MIR SINE MIR 47 202 -6 271 302 132 16 chr10 72490306 72490435 -67826330 - MIR3 SINE MIR -37 171 28 213 39 0 0 chr10 72491041 72491067 -67825698 + (CTGGGG)n Simple_repeat Simple_repeat 2 27 0 658 192 146 7 chr10 72491578 72491729 -67825036 + MER5B DNA MER1_type 5 176 -2 319 297 34 17 chr10 72491741 72491859 -67824906 + MER5B DNA MER1_type 7 126 -52 367 315 266 3 chr10 72491902 72492188 -67824577 - L2 LINE L2 -1 3312 2952 463 203 22 26 chr10 72492351 72492486 -67824279 - MIR3 SINE MIR -31 177 94 193 303 34 67 chr10 72493483 72493572 -67823193 + MIR SINE MIR 113 198 -64 305 294 77 55 chr10 72494551 72494742 -67822023 + MIR SINE MIR 4 209 -53 911 317 44 32 chr10 72494795 72495595 -67821170 - L1MC/D LINE L1 -773 5373 4695 302 298 66 50 chr10 72495576 72495757 -67821008 - L1MC/D LINE L1 -1945 4201 4018 * 402 74 0 0 chr10 72495763 72495817 -67820948 + (TG)n Simple_repeat Simple_repeat 2 55 0 316 325 70 0 chr10 72495817 72495931 -67820834 - L1MC3 LINE L1 -1139 6646 6525 2639 69 11 32 chr10 72495938 72496230 -67820535 - L1PB1 LINE L1 0 6151 5867 2342 100 0 0 chr10 72496230 72496539 -67820226 + AluSx SINE Alu 1 309 -3 2639 69 11 32 chr10 72496539 72496623 -67820142 - L1PB1 LINE L1 -284 5867 5783 294 221 6 116 chr10 72496670 72496842 -67819923 - L1MC/D LINE L1 -2208 3938 3786 444 353 34 15 chr10 72496881 72497085 -67819680 - MIR SINE MIR -27 235 28 2300 99 0 0 chr10 72497142 72497454 -67819311 + AluSx SINE Alu 1 312 0 330 222 73 75 chr10 72498317 72498445 -67818320 - MIR SINE MIR -64 144 20 224 229 325 0 chr10 72498837 72498920 -67817845 - MIR SINE MIR -63 145 36 352 250 102 9 chr10 72498927 72499035 -67817730 - MIR SINE MIR -57 151 34 501 17 0 0 chr10 72499100 72499158 -67817607 + (TG)n Simple_repeat Simple_repeat 2 59 0 279 71 0 0 chr10 72499252 72499294 -67817471 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 213 0 0 chr10 72500239 72500286 -67816479 - L2 LINE L2 0 3313 3267 216 314 95 19 chr10 72501048 72501153 -67815612 - MIR SINE MIR -41 221 109 233 307 26 53 chr10 72501345 72501459 -67815306 + L2 LINE L2 2973 3083 -189 279 0 0 0 chr10 72501506 72501537 -67815228 + (ATG)n Simple_repeat Simple_repeat 3 33 0 683 240 80 53 chr10 72501549 72501774 -67814991 - MIR SINE MIR -15 247 17 189 234 99 117 chr10 72502572 72502683 -67814082 - MIR SINE MIR -69 139 31 784 272 10 5 chr10 72502781 72502976 -67813789 - MIR SINE MIR -8 254 59 3679 46 21 0 chr10 72503845 72504280 -67812485 + MLT2A1 LTR ERVL 1 444 0 266 286 107 14 chr10 72507307 72507447 -67809318 + MIR3 SINE MIR 7 159 -49 261 0 0 0 chr10 72507680 72507709 -67809056 + (CA)n Simple_repeat Simple_repeat 1 29 0 396 0 0 0 chr10 72509752 72509796 -67806969 + (CA)n Simple_repeat Simple_repeat 2 45 0 306 0 0 0 chr10 72509815 72509849 -67806916 + (TAA)n Simple_repeat Simple_repeat 1 34 0 198 71 0 0 chr10 72510596 72510624 -67806141 + (CCG)n Simple_repeat Simple_repeat 2 29 0 216 0 0 0 chr10 72511333 72511357 -67805408 + (TG)n Simple_repeat Simple_repeat 2 25 0 312 288 71 35 chr10 72511433 72511603 -67805162 + L3 LINE CR1 1367 1542 -35 504 257 146 24 chr10 72511794 72512000 -67804765 + MIR SINE MIR 20 250 -12 321 229 42 10 chr10 72512010 72512106 -67804659 + MIR3 SINE MIR 101 199 -9 202 256 0 0 chr10 72512305 72512348 -67804417 - MIR SINE MIR -62 146 104 22 35 0 0 chr10 72512521 72512550 -67804215 + AT_rich Low_complexity Low_complexity 1 29 0 334 316 32 103 chr10 72512560 72512842 -67803923 - L2 LINE L2 -22 3250 2989 201 256 47 0 chr10 72513228 72513307 -67803458 + MIR SINE MIR 105 150 -58 182 254 63 0 chr10 72514183 72514246 -67802519 - L2 LINE L2 0 3313 3247 288 330 0 11 chr10 72514491 72514585 -67802180 - MIR SINE MIR -65 143 51 203 114 23 0 chr10 72514725 72514769 -67801996 + GA-rich Low_complexity Low_complexity 2 46 0 1779 143 0 40 chr10 72516484 72516785 -67799980 - AluSx SINE Alu -23 289 1 1560 155 44 7 chr10 72516827 72517123 -67799642 - AluSx SINE Alu -5 307 1 314 149 0 45 chr10 72517565 72517632 -67799133 + Alu SINE Alu 239 302 0 309 322 35 0 chr10 72517905 72517992 -67798773 - L1MC4 LINE L1 -1343 6699 6610 1703 117 86 14 chr10 72518103 72518394 -67798371 + AluSx SINE Alu 1 312 0 1255 171 5 0 chr10 72518396 72518606 -67798159 + MLT1D LTR MaLR 295 505 0 347 129 0 43 chr10 72520666 72520736 -67796029 + MIR SINE MIR 85 151 -57 794 299 9 0 chr10 72521026 72521240 -67795525 + MIR SINE MIR 47 262 0 226 310 168 9 chr10 72521233 72521346 -67795419 - MIR SINE MIR -62 146 16 * 2094 113 0 7 chr10 72521735 72522037 -67794728 + AluSc SINE Alu 2 301 -8 409 243 121 21 chr10 72522046 72522186 -67794579 + MER103 DNA DNA 12 165 -1 2191 85 3 3 chr10 72522265 72522558 -67794207 + AluSx SINE Alu 10 302 -10 231 275 44 33 chr10 72523353 72523444 -67793321 + MIR SINE MIR 60 151 -111 186 307 31 63 chr10 72523987 72524114 -67792651 + MIR SINE MIR 31 153 -55 651 197 7 20 chr10 72524360 72524512 -67792253 - L1MB8 LINE L1 0 6178 6029 2010 135 0 28 chr10 72524515 72524932 -67791833 + AluJo SINE Alu 1 408 0 2837 197 71 60 chr10 72524933 72525365 -67791400 - L1MB7 LINE L1 -148 6036 5610 2228 104 0 0 chr10 72525365 72525664 -67791101 - AluSx SINE Alu -13 299 1 2837 197 71 60 chr10 72525664 72525779 -67790986 - L1MB7 LINE L1 -574 5610 5498 2297 107 7 0 chr10 72525779 72526089 -67790676 - AluSx SINE Alu 0 312 1 2837 197 71 60 chr10 72526089 72526236 -67790529 - L1MB7 LINE L1 -686 5498 5354 2116 121 0 3 chr10 72526236 72526541 -67790224 - AluSx SINE Alu -8 304 1 2837 197 71 60 chr10 72526541 72526790 -67789975 - L1MB7 LINE L1 -830 5354 5093 209 179 48 60 chr10 72527192 72527276 -67789489 - L2 LINE L2 -338 2934 2852 192 349 47 0 chr10 72527339 72527445 -67789320 - L2 LINE L2 -874 2440 2330 530 298 157 54 chr10 72527942 72528178 -67788587 + L1MC4a LINE L1 5468 5693 -469 1955 75 54 41 chr10 72528178 72528473 -67788292 + AluSx SINE Alu 1 299 -13 530 298 157 54 chr10 72528473 72528629 -67788136 + L1MC4a LINE L1 5693 5831 -331 591 184 8 3 chr10 72529846 72530206 -67786559 + (TG)n Simple_repeat Simple_repeat 1 362 0 226 263 66 0 chr10 72530716 72530792 -67785973 - L1ME4a LINE L1 -27 6094 6014 315 349 16 0 chr10 72530928 72531057 -67785708 - L1ME4a LINE L1 -399 5722 5592 1743 271 165 4 chr10 72531119 72532054 -67784711 + L2 LINE L2 2177 3282 -31 427 203 41 3 chr10 72532738 72532851 -67783914 + MIR SINE MIR 11 124 -84 419 218 30 20 chr10 72534200 72534301 -67782464 + MIR SINE MIR 105 206 -56 195 42 0 0 chr10 72534338 72534362 -67782403 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 288 349 12 0 chr10 72534502 72534588 -67782177 + MIR SINE MIR 72 158 -104 901 296 63 54 chr10 72534607 72535161 -67781604 + L1MC4a LINE L1 5329 5887 -1921 820 225 72 29 chr10 72535315 72535591 -67781174 + MER102b DNA MER1_type 54 341 0 2237 100 0 10 chr10 72535709 72536018 -67780747 + AluSx SINE Alu 7 312 0 259 266 21 75 chr10 72536779 72536873 -67779892 + MIR SINE MIR 33 121 -141 21 0 0 0 chr10 72536931 72536952 -67779813 + AT_rich Low_complexity Low_complexity 1 21 0 242 197 71 15 chr10 72537652 72537746 -67779019 + MIR SINE MIR 71 138 -70 285 387 32 72 chr10 72537865 72538240 -67778525 - L2 LINE L2 -1 3271 2912 220 226 19 0 chr10 72538655 72538708 -67778057 - L3 LINE CR1 -112 1465 1412 277 278 78 17 chr10 72538717 72538832 -67777933 - MIR3 SINE MIR -4 204 83 1992 142 0 10 chr10 72539081 72539392 -67777373 + AluSx SINE Alu 1 308 -4 769 267 35 47 chr10 72539496 72539751 -67777014 + MIR SINE MIR 10 261 -1 272 253 173 49 chr10 72539686 72539848 -67776917 - MIR SINE MIR -17 245 64 * 192 296 96 26 chr10 72540590 72540705 -67776060 - MIR3 SINE MIR -73 135 13 605 261 37 12 chr10 72541835 72541996 -67774769 - MIR SINE MIR 0 262 98 292 303 46 51 chr10 72542117 72542292 -67774473 - L2 LINE L2 -213 3059 2886 481 302 180 5 chr10 72542748 72542970 -67773795 + MIR SINE MIR 1 261 -1 248 333 103 8 chr10 72543004 72543121 -67773644 - L2 LINE L2 0 3272 3145 982 180 38 85 chr10 72543124 72543207 -67773558 - MER33 DNA MER1_type -2264 321 236 1742 150 10 39 chr10 72543207 72543514 -67773251 + AluJb SINE Alu 7 304 -8 982 180 38 85 chr10 72543514 72543746 -67773019 - MER33 DNA MER1_type -2349 236 21 326 280 312 16 chr10 72544093 72544343 -67772422 - L3 LINE CR1 -15 1562 1239 413 189 11 22 chr10 72546263 72546353 -67770412 + MIR3 SINE MIR 78 166 -42 532 320 34 11 chr10 72546976 72547154 -67769611 - L3 LINE CR1 -103 1474 1293 212 213 149 53 chr10 72547218 72547312 -67769453 - MIR SINE MIR -1 261 159 2308 88 0 7 chr10 72547907 72548212 -67768553 - AluSx SINE Alu -9 303 1 2216 283 135 12 chr10 72548230 72549279 -67767486 + L2 LINE L2 1868 3063 -250 308 317 107 15 chr10 72550053 72550258 -67766507 + L2 LINE L2 2862 3085 -187 243 296 28 0 chr10 72550560 72550631 -67766134 + L2 LINE L2 3200 3272 0 184 298 0 0 chr10 72551763 72551810 -67764955 - MIR3 SINE MIR -49 159 113 * 618 183 213 6 chr10 72551805 72551969 -67764796 + MIR SINE MIR 39 236 -26 1721 164 19 22 chr10 72552474 72552786 -67763979 - AluJo SINE Alu -1 311 1 939 177 53 0 chr10 72552800 72553009 -67763756 - L1MD3 LINE L1 -8 7987 7768 227 100 0 25 chr10 72553088 72553128 -67763637 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 694 244 31 70 chr10 72553144 72553402 -67763363 - L2 LINE L2 0 3313 3066 245 302 104 0 chr10 72553500 72553596 -67763169 - MIR SINE MIR -67 141 36 614 284 99 26 chr10 72554342 72554574 -67762191 - MIR SINE MIR 0 262 14 180 312 15 116 chr10 72554596 72554795 -67761970 - L2 LINE L2 -93 3179 3001 486 343 110 4 chr10 72554898 72555134 -67761631 - MIR SINE MIR 0 262 2 279 339 36 0 chr10 72555288 72555400 -67761365 + MIR SINE MIR 29 144 -64 614 203 20 37 chr10 72555987 72556149 -67760616 + MIR3 SINE MIR 13 171 -52 382 256 19 51 chr10 72556242 72556398 -67760367 + MIR SINE MIR 56 206 -56 251 244 73 61 chr10 72556406 72556422 -67760343 + MIR SINE MIR 180 194 -68 2320 81 7 3 chr10 72556422 72556730 -67760035 - AluY SINE Alu -2 309 1 1703 141 34 24 chr10 72556730 72557027 -67759738 - AluJo SINE Alu -10 302 3 251 244 73 61 chr10 72557027 72557091 -67759674 + MIR SINE MIR 193 262 0 290 330 207 25 chr10 72557256 72557613 -67759152 - L3 LINE CR1 -25 1552 1131 * 679 250 82 14 chr10 72557604 72557824 -67758941 - MIR SINE MIR -25 237 3 180 294 211 9 chr10 72559326 72559435 -67757330 - MIR SINE MIR -46 216 86 237 262 0 49 chr10 72559516 72559577 -67757188 - MER5A DNA MER1_type -115 74 17 383 330 65 11 chr10 72560201 72560386 -67756379 + MIR SINE MIR 53 247 -15 855 253 5 15 chr10 72561628 72561826 -67754939 - MIR SINE MIR -64 198 3 611 315 65 10 chr10 72561868 72562068 -67754697 - MIR SINE MIR -15 247 37 335 283 92 46 chr10 72562552 72562704 -67754061 - MIR SINE MIR -1 261 103 738 269 15 0 chr10 72562706 72562903 -67753862 - MER3 DNA MER1_type -9 200 1 196 293 0 35 chr10 72563053 72563111 -67753654 - MIR SINE MIR -65 143 88 312 361 0 16 chr10 72563769 72563952 -67752813 + (TG)n Simple_repeat Simple_repeat 1 180 0 337 363 0 0 chr10 72563964 72564124 -67752641 + (TG)n Simple_repeat Simple_repeat 1 160 0 400 300 0 58 chr10 72564158 72564348 -67752417 + (TG)n Simple_repeat Simple_repeat 2 180 0 204 216 0 0 chr10 72564521 72564558 -67752207 + (TG)n Simple_repeat Simple_repeat 1 37 0 1117 187 11 0 chr10 72564935 72565122 -67751643 - MER5A DNA MER1_type 0 189 1 775 293 43 23 chr10 72565189 72565445 -67751320 + MIR SINE MIR 2 262 0 344 212 32 28 chr10 72565417 72565562 -67751203 - MIR3 SINE MIR -86 176 2 * 224 303 71 0 chr10 72565980 72566079 -67750686 + L2 LINE L2 2699 2804 -510 2969 194 18 63 chr10 72566783 72567258 -67749507 - L1ME1 LINE L1 -6 6160 5665 1962 140 3 0 chr10 72567258 72567550 -67749215 - AluSx SINE Alu -19 293 1 2969 194 18 63 chr10 72567550 72567641 -67749124 - L1ME1 LINE L1 -501 5665 5571 643 232 0 43 chr10 72567641 72567779 -67748986 - FLAM_A SINE Alu -1 132 1 2969 194 18 63 chr10 72567779 72567907 -67748858 - L1ME1 LINE L1 -595 5571 5439 1135 161 5 32 chr10 72567907 72568125 -67748640 - L1MB4 LINE L1 -1 6179 5968 2969 194 18 63 chr10 72568125 72568138 -67748627 - L1ME1 LINE L1 -727 5439 5427 1688 163 37 13 chr10 72568138 72568438 -67748327 - AluJb SINE Alu -5 307 1 2969 194 18 63 chr10 72568438 72568786 -67747979 - L1ME1 LINE L1 -739 5427 5151 234 382 118 31 chr10 72568862 72569687 -67747078 + L2 LINE L2 1845 3262 -10 563 255 53 41 chr10 72569721 72570149 -67746616 + LTR33A LTR ERVL 2 517 -6 250 290 29 0 chr10 72571029 72571098 -67745667 - L2 LINE L2 -5 3267 3197 654 279 104 17 chr10 72571146 72571386 -67745379 + MIR SINE MIR 2 262 0 291 276 35 11 chr10 72572219 72572306 -67744459 + MIR SINE MIR 113 201 -61 377 266 36 78 chr10 72572442 72572634 -67744131 + MIR3 SINE MIR 23 206 -2 359 324 44 0 chr10 72573542 72573678 -67743087 + MIR3 SINE MIR 36 177 -31 400 271 14 43 chr10 72573988 72574128 -67742637 - MIR3 SINE MIR -15 193 54 2335 95 0 0 chr10 72574834 72575139 -67741626 - AluSx SINE Alu -7 305 1 273 309 44 28 chr10 72575160 72575341 -67741424 + L2 LINE L2 2127 2310 -1004 488 244 177 6 chr10 72575541 72575705 -67741060 - MER117 DNA MER1_type 0 197 6 564 385 28 7 chr10 72575710 72576108 -67740657 + L2 LINE L2 2605 3013 -300 472 244 109 26 chr10 72576711 72576867 -67739898 - MIR SINE MIR -57 205 37 244 329 26 0 chr10 72577728 72577874 -67738891 - MLT1J2 LTR MaLR -192 217 70 245 315 222 17 chr10 72578000 72578302 -67738463 - L2 LINE L2 -5 3267 2904 238 349 205 8 chr10 72578488 72578746 -67738019 - L2 LINE L2 -774 2540 2232 278 209 26 17 chr10 72579837 72579952 -67736813 + CT-rich Low_complexity Low_complexity 3 118 0 430 295 23 0 chr10 72581320 72581449 -67735316 - MIR SINE MIR -29 233 102 214 222 63 0 chr10 72582234 72582297 -67734468 + MIR SINE MIR 30 96 -112 480 293 18 18 chr10 72582347 72582514 -67734251 - L1M4 LINE L1 -2051 4095 3929 2275 97 0 3 chr10 72582685 72582995 -67733770 - AluSc SINE Alu 0 309 1 332 338 53 8 chr10 72583006 72583139 -67733626 - MLT1L LTR MaLR -80 535 397 239 333 125 0 chr10 72584280 72584400 -67732365 - MIR SINE MIR -108 154 20 760 259 163 4 chr10 72584414 72584684 -67732081 - LTR16A LTR ERVL 0 450 138 314 290 21 0 chr10 72584746 72584839 -67731926 + L2 LINE L2 2944 3038 -234 555 174 11 0 chr10 72584952 72585044 -67731721 - Tigger2 DNA MER2_type -10 2708 2616 259 128 0 0 chr10 72585043 72585082 -67731683 - Tigger2 DNA MER2_type -2679 39 1 * 23 54 0 0 chr10 72585234 72585271 -67731494 + AT_rich Low_complexity Low_complexity 1 37 0 361 345 173 8 chr10 72586204 72586459 -67730306 + MER102b DNA MER1_type 28 324 -17 1534 299 91 48 chr10 72586472 72587266 -67729499 - L1MEd LINE L1 -4737 1573 815 369 0 0 0 chr10 72587266 72587307 -67729458 + (TG)n Simple_repeat Simple_repeat 1 41 0 1534 299 91 48 chr10 72587307 72587996 -67728769 - L1MEd LINE L1 -5495 815 3 350 256 23 0 chr10 72588199 72588285 -67728480 - MIR SINE MIR -64 144 57 1106 202 43 32 chr10 72588368 72588621 -67728144 - MIR SINE MIR 0 262 7 477 158 0 0 chr10 72588625 72588707 -67728058 + AluS SINE Alu 227 308 -4 198 194 0 0 chr10 72589516 72589552 -67727213 + MIR3 SINE MIR 165 200 -8 372 258 48 16 chr10 72590314 72590438 -67726327 - L2 LINE L2 -2 3270 3143 181 291 165 0 chr10 72590599 72590678 -67726087 - MIR SINE MIR -87 121 30 217 322 0 0 chr10 72590688 72590758 -67726007 + MIR SINE MIR 80 150 -58 183 156 0 0 chr10 72591107 72591139 -67725626 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 591 273 6 18 chr10 72591263 72591428 -67725337 - MER103 DNA DNA -2 164 2 816 274 47 8 chr10 72592070 72592304 -67724461 + MIR SINE MIR 12 254 -8 519 214 207 0 chr10 72592304 72592449 -67724316 + MER96 DNA MER1_type 1 175 0 1582 139 104 21 chr10 72593220 72593508 -67723257 + AluJo SINE Alu 1 312 0 683 179 167 6 chr10 72593573 72593735 -67723030 + MER5A DNA MER1_type 2 189 0 611 254 12 35 chr10 72593745 72593918 -67722847 + MER5B DNA MER1_type 3 171 -7 523 266 40 17 chr10 72594140 72594313 -67722452 + MER5B DNA MER1_type 2 178 0 498 250 23 47 chr10 72594390 72594562 -67722203 - MER5B DNA MER1_type -3 175 8 240 315 34 60 chr10 72595384 72595533 -67721232 + MIR3 SINE MIR 9 153 -55 402 301 52 0 chr10 72595567 72595720 -67721045 - MER117 DNA MER1_type -30 167 7 305 341 36 0 chr10 72595769 72595907 -67720858 - MIR3 SINE MIR -55 153 11 344 289 74 7 chr10 72596157 72596292 -67720473 + L2 LINE L2 3129 3272 0 377 148 0 0 chr10 72596321 72596382 -67720383 + MIR SINE MIR 57 117 -145 2289 112 53 0 chr10 72596585 72596961 -67719804 + L1MA4 LINE L1 5653 6048 -252 1847 143 0 0 chr10 72596961 72597227 -67719538 + AluSp SINE Alu 13 278 -35 2164 119 3 0 chr10 72597227 72597537 -67719228 + AluSp SINE Alu 1 311 -2 1204 100 0 12 chr10 72597538 72597708 -67719057 + AluSg/x SINE Alu 135 302 -10 1425 128 22 0 chr10 72597711 72597938 -67718827 + L1MA5 LINE L1 6068 6299 -1 246 217 203 16 chr10 72598329 72598440 -67718325 + MIR SINE MIR 9 135 -73 602 26 0 13 chr10 72598440 72598517 -67718248 + (TTTTC)n Simple_repeat Simple_repeat 4 79 0 2106 116 6 3 chr10 72598527 72598838 -67717927 - AluSx SINE Alu 0 312 1 302 314 33 65 chr10 72598838 72598985 -67717780 + MIR SINE MIR 115 256 -6 486 259 22 0 chr10 72599948 72600087 -67716678 + MER117 DNA MER1_type 9 150 -47 442 345 52 39 chr10 72601173 72601706 -67715059 - L2 LINE L2 0 3313 2778 2909 160 10 25 chr10 72601709 72602228 -67714537 - L1MB2 LINE L1 0 6171 5661 746 211 22 15 chr10 72602733 72602952 -67713813 - LTR16C LTR ERVL -6 485 219 621 309 42 0 chr10 72603122 72603339 -67713426 - LTR16C LTR ERVL -264 227 2 3700 165 12 20 chr10 72603434 72604088 -67712677 + L1MB5 LINE L1 5526 6174 0 212 265 59 0 chr10 72604843 72604911 -67711854 + MIR SINE MIR 68 139 -69 1897 129 0 14 chr10 72605079 72605374 -67711391 + AluSx SINE Alu 1 291 -21 277 331 71 26 chr10 72605541 72605695 -67711070 + MIR3 SINE MIR 33 193 -15 647 231 46 18 chr10 72605703 72605901 -67710864 + MIR SINE MIR 48 251 -11 367 333 169 5 chr10 72606010 72606223 -67710542 + MIR SINE MIR 14 261 -1 211 240 116 0 chr10 72606341 72606413 -67710352 - MIR SINE MIR -63 145 86 492 196 118 0 chr10 72606540 72606642 -67710123 - MER81 DNA DNA 0 114 1 1722 224 55 61 chr10 72606948 72607438 -67709327 - MLT1K LTR MaLR 0 588 102 361 266 26 35 chr10 72608313 72608426 -67708339 - MIR SINE MIR -76 132 21 193 164 164 0 chr10 72609779 72609834 -67706931 - MIR SINE MIR -120 142 79 295 233 0 0 chr10 72610482 72610542 -67706223 - L2 LINE L2 0 3272 3213 417 289 38 31 chr10 72610595 72610754 -67706011 + MIR3 SINE MIR 30 189 -19 202 205 161 5 chr10 72611345 72611461 -67705304 + MIR3 SINE MIR 14 198 -10 479 186 10 135 chr10 72611623 72611816 -67704949 + L3 LINE CR1 1315 1483 -94 392 258 77 44 chr10 72611855 72612037 -67704728 - MER5A DNA MER1_type 0 189 2 342 0 0 0 chr10 72613027 72613065 -67703700 + (TC)n Simple_repeat Simple_repeat 1 38 0 300 53 0 0 chr10 72613064 72613102 -67703663 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 595 283 89 11 chr10 72613296 72613476 -67703289 + MIR SINE MIR 67 260 -2 452 323 94 15 chr10 72614243 72614444 -67702321 - MIR SINE MIR 0 262 46 262 311 47 61 chr10 72614472 72614620 -67702145 + MIR SINE MIR 117 262 0 246 341 174 0 chr10 72614604 72614736 -67702029 + L2 LINE L2 3114 3268 -4 * 258 32 0 0 chr10 72615730 72615761 -67701004 + (TG)n Simple_repeat Simple_repeat 2 32 0 320 287 49 15 chr10 72615792 72615965 -67700800 - MIR SINE MIR -51 211 33 329 255 128 26 chr10 72617273 72617432 -67699333 + MIR SINE MIR 74 260 -2 1814 152 0 71 chr10 72617442 72617778 -67698987 - AluJb SINE Alu 0 312 1 255 266 73 37 chr10 72618051 72618160 -67698605 - MIR3 SINE MIR -35 173 61 217 246 70 0 chr10 72619320 72619377 -67697388 - MIR SINE MIR -97 165 105 724 268 38 9 chr10 72619844 72620057 -67696708 - L1ME3A LINE L1 -27 6143 5925 242 269 65 43 chr10 72620136 72620229 -67696536 + MIR SINE MIR 10 104 -158 359 260 24 55 chr10 72620521 72620648 -67696117 - MIR SINE MIR -64 198 76 181 191 119 0 chr10 72621404 72621446 -67695319 - L2 LINE L2 0 3272 3226 214 343 98 72 chr10 72621526 72621955 -67694810 + L2 LINE L2 2827 3266 -6 2275 150 97 66 chr10 72622216 72622572 -67694193 + MLT1D LTR MaLR 1 377 -128 1962 125 30 7 chr10 72622572 72622877 -67693888 - AluSx SINE Alu 0 312 1 2275 150 97 66 chr10 72622877 72623006 -67693759 + MLT1D LTR MaLR 377 501 -4 299 281 24 0 chr10 72623571 72623653 -67693112 - L2 LINE L2 0 3272 3189 373 304 101 0 chr10 72624403 72624551 -67692214 - MIR SINE MIR -58 204 42 357 264 270 17 chr10 72625317 72625495 -67691270 + MIR SINE MIR 3 225 -37 244 202 0 0 chr10 72625642 72625695 -67691070 + MIR SINE MIR 100 146 -62 491 228 167 31 chr10 72626743 72626905 -67689860 - MER5A DNA MER1_type 0 189 6 297 307 92 12 chr10 72627017 72627180 -67689585 + MER91A DNA MER1_type 1 176 -20 420 55 0 0 chr10 72627686 72627741 -67689024 + (CA)n Simple_repeat Simple_repeat 1 55 0 371 340 91 0 chr10 72628443 72628618 -67688147 - MIR SINE MIR -15 247 57 237 333 11 11 chr10 72628685 72628775 -67687990 - L3 LINE CR1 -173 1404 1315 2221 108 0 6 chr10 72630389 72630703 -67686062 - AluSx SINE Alu 0 312 1 317 292 62 49 chr10 72630863 72631007 -67685758 + MIR SINE MIR 28 173 -89 191 304 44 74 chr10 72631101 72631197 -67685568 - L2 LINE L2 -79 3193 3101 405 0 0 0 chr10 72631197 72631242 -67685523 + (CA)n Simple_repeat Simple_repeat 1 45 0 191 304 44 74 chr10 72631242 72631280 -67685485 - L2 LINE L2 -171 3101 3063 354 324 38 22 chr10 72635428 72635633 -67681132 - MIR SINE MIR -20 242 35 382 269 106 0 chr10 72636041 72636145 -67680620 - MIR3 SINE MIR -4 204 90 218 349 92 20 chr10 72636444 72636596 -67680169 - MIR SINE MIR -44 218 56 215 100 0 25 chr10 72637112 72637152 -67679613 + (TC)n Simple_repeat Simple_repeat 2 40 0 419 326 12 22 chr10 72637329 72637558 -67679207 + CT-rich Low_complexity Low_complexity 1 226 0 191 330 80 0 chr10 72638461 72638549 -67678216 - MIR SINE MIR -87 121 27 1757 211 27 0 chr10 72639354 72639686 -67677079 - MER58B DNA MER1_type 0 341 1 268 282 71 0 chr10 72639688 72639773 -67676992 - MIR3 SINE MIR -21 187 97 468 224 48 95 chr10 72639875 72640087 -67676678 + MIR SINE MIR 7 207 -1 185 339 104 0 chr10 72640797 72640912 -67675853 - MIR SINE MIR -117 145 19 253 281 45 11 chr10 72641338 72641427 -67675338 - MIR SINE MIR -65 143 52 904 232 174 9 chr10 72643235 72643563 -67673202 - L2 LINE L2 0 3313 2932 400 341 80 49 chr10 72643999 72644263 -67672502 - L2 LINE L2 -19 3253 2982 295 210 12 74 chr10 72644256 72644337 -67672428 + L2 LINE L2 3238 3313 0 * 278 226 0 0 chr10 72644325 72644387 -67672378 - L2 LINE L2 -286 2986 2925 * 251 234 94 0 chr10 72644517 72644581 -67672184 + L2 LINE L2 3242 3311 -2 627 297 65 63 chr10 72644668 72645113 -67671652 - L2 LINE L2 -2 3270 2825 293 294 62 75 chr10 72647044 72647190 -67669575 - L3b LINE CR1 -8 1575 1432 300 323 81 25 chr10 72647192 72647353 -67669412 + MER117 DNA MER1_type 1 170 -27 281 310 92 35 chr10 72647787 72647929 -67668836 + MIR SINE MIR 103 252 -10 1550 177 0 31 chr10 72647966 72648297 -67668468 + AluJo SINE Alu 28 349 0 367 182 185 2 chr10 72649812 72649953 -67666812 - MIR SINE MIR -61 147 6 276 323 143 19 chr10 72650340 72650501 -67666264 - MIR3 SINE MIR -24 184 4 206 350 38 0 chr10 72650623 72650703 -67666062 + MIR3 SINE MIR 76 158 -50 440 174 304 14 chr10 72650705 72650843 -67665922 - MER5B DNA MER1_type 0 178 1 226 321 110 0 chr10 72651762 72651850 -67664915 - MIR SINE MIR -10 252 148 1591 160 7 28 chr10 72651850 72652138 -67664627 - AluJo SINE Alu 0 312 31 226 321 110 0 chr10 72652138 72652158 -67664607 - MIR SINE MIR -114 148 132 268 301 46 56 chr10 72652420 72652616 -67664149 - MIR SINE MIR -42 220 27 268 276 0 11 chr10 72653069 72653156 -67663609 - HAL1 LINE L1 -954 1553 1468 2028 116 51 0 chr10 72653989 72654282 -67662483 + AluSx SINE Alu 1 308 -4 450 260 116 47 chr10 72654338 72654615 -67662150 - HAL1 LINE L1 -1 2506 2211 1939 262 155 51 chr10 72654763 72655653 -67661112 - HAL1 LINE L1 -307 2200 1404 2109 120 0 16 chr10 72655653 72655970 -67660795 - AluSx SINE Alu 0 312 1 1939 262 155 51 chr10 72655970 72657022 -67659743 - HAL1 LINE L1 -1103 1404 11 198 245 38 0 chr10 72657035 72657088 -67659677 - L2 LINE L2 -4 3268 3214 236 263 132 0 chr10 72657918 72657994 -67658771 - L3b LINE CR1 -197 1386 1301 398 269 0 14 chr10 72658180 72658299 -67658466 + MIR SINE MIR 30 143 -67 269 365 0 8 chr10 72658957 72659083 -67657682 + CT-rich Low_complexity Low_complexity 3 127 0 217 127 0 127 chr10 72659758 72659829 -67656936 + (CCCCAA)n Simple_repeat Simple_repeat 4 65 0 600 258 16 67 chr10 72660774 72660968 -67655797 + MIR3 SINE MIR 11 194 -14 426 319 72 48 chr10 72661312 72661407 -67655358 - MIR SINE MIR -3 259 168 1869 79 0 0 chr10 72661407 72661648 -67655117 - AluSg/x SINE Alu 0 312 72 426 319 72 48 chr10 72661648 72661803 -67654962 - MIR SINE MIR -94 168 3 402 195 0 0 chr10 72662448 72662530 -67654235 - L1 LINE L1 -2583 3563 3482 477 272 72 13 chr10 72662869 72663198 -67653567 - LTR33 LTR ERVL -84 437 40 427 285 124 23 chr10 72663339 72663560 -67653205 - MIR SINE MIR -27 235 4 518 244 69 25 chr10 72664764 72664924 -67651841 - MIR SINE MIR -15 247 81 253 260 14 58 chr10 72665206 72665302 -67651463 - MIR SINE MIR -105 103 9 445 315 19 19 chr10 72667101 72667263 -67649502 - MIR3 SINE MIR -1 207 46 415 250 10 0 chr10 72667298 72667394 -67649371 + MIR SINE MIR 48 144 -118 1024 133 7 0 chr10 72667567 72667718 -67649047 - FAM SINE Alu -16 169 18 314 253 11 11 chr10 72668325 72668412 -67648353 + (TG)n Simple_repeat Simple_repeat 2 88 0 558 261 246 14 chr10 72672974 72673185 -67643580 - MIR SINE MIR 0 262 3 276 342 25 25 chr10 72674617 72674778 -67641987 + L2 LINE L2 2924 3084 -188 340 214 17 55 chr10 72675169 72675290 -67641475 - MIR SINE MIR -79 129 38 386 240 67 47 chr10 72676670 72676820 -67639945 + MIR SINE MIR 110 262 0 215 359 16 0 chr10 72677077 72677141 -67639624 + L2 LINE L2 3249 3313 0 415 306 31 19 chr10 72677154 72677314 -67639451 - MER5A DNA MER1_type -1 188 27 381 308 139 0 chr10 72678156 72678328 -67638437 + MER117 DNA MER1_type 2 197 0 388 378 53 10 chr10 72679579 72679788 -67636977 + MIR SINE MIR 21 238 -24 190 237 0 0 chr10 72679841 72679879 -67636886 + MIR SINE MIR 3 40 -222 1389 167 54 11 chr10 72679886 72680204 -67636561 + MER33 DNA MER1_type 1 315 -9 408 297 189 11 chr10 72680213 72680388 -67636377 + MIR SINE MIR 32 237 -25 288 340 54 20 chr10 72680408 72680555 -67636210 - L2 LINE L2 -5 3267 3116 347 349 74 25 chr10 72680734 72681170 -67635595 - L2 LINE L2 -222 3050 2599 436 253 220 11 chr10 72681400 72681582 -67635183 - MIR SINE MIR -14 248 29 629 197 16 0 chr10 72681602 72681729 -67635036 + MER5A DNA MER1_type 1 129 -60 324 154 0 0 chr10 72681720 72681772 -67634993 - MER5A DNA MER1_type -137 52 1 * 358 158 7 151 chr10 72681844 72681983 -67634782 + MER106A DNA MER1_type 117 235 -1 297 0 0 0 chr10 72682213 72682246 -67634519 + (TG)n Simple_repeat Simple_repeat 2 34 0 201 428 7 0 chr10 72682827 72682972 -67633793 - L2 LINE L2 -792 2522 2377 226 240 190 0 chr10 72683014 72683114 -67633651 - MER117 DNA MER1_type -37 160 42 213 194 0 69 chr10 72684235 72684307 -67632458 + (CACCT)n Simple_repeat Simple_repeat 3 69 0 497 292 95 19 chr10 72684441 72684713 -67632052 - L1ME3A LINE L1 -224 5946 5658 446 328 0 8 chr10 72684770 72684895 -67631870 - MIR SINE MIR -119 143 20 348 94 0 0 chr10 72684981 72685034 -67631731 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 503 308 56 20 chr10 72685040 72685235 -67631530 - L2 LINE L2 -11 3302 3101 684 187 122 0 chr10 72686022 72686161 -67630604 + MIR SINE MIR 85 240 -22 203 0 0 36 chr10 72686164 72686192 -67630573 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2164 101 7 0 chr10 72686798 72687086 -67629679 - AluSg SINE Alu -20 290 1 705 261 70 33 chr10 72687482 72687723 -67629042 - MIR SINE MIR 0 262 13 1082 130 0 38 chr10 72688388 72688572 -67628193 + FRAM SINE Alu 1 176 0 1146 269 105 35 chr10 72688895 72689379 -67627386 - MER113 DNA MER1_type? -3 518 1 199 191 0 118 chr10 72689450 72689518 -67627247 + L2 LINE L2 3210 3269 -3 2051 200 72 29 chr10 72689982 72690466 -67626299 - MLT1D LTR MaLR 0 505 1 1108 310 75 8 chr10 72690790 72691426 -67625339 + L1M3 LINE L1 4783 5457 -726 993 158 71 55 chr10 72691439 72691507 -67625258 + MER58D DNA MER1_type 26 91 -2329 1255 210 100 0 chr10 72691507 72691788 -67624977 + AluJo SINE Alu 1 309 -3 993 158 71 55 chr10 72691788 72691973 -67624792 + MER58D DNA MER1_type 91 283 -103 324 200 0 0 chr10 72691974 72692044 -67624721 + CT-rich Low_complexity Low_complexity 2 71 0 2095 108 10 7 chr10 72692045 72692342 -67624423 - AluSp SINE Alu -15 298 1 489 176 118 0 chr10 72692342 72692444 -67624321 + MER58D DNA MER1_type 271 384 -2 338 213 0 0 chr10 72692478 72692553 -67624212 - MER116 DNA Mariner 0 80 6 185 200 0 0 chr10 72692795 72692830 -67623935 + MIR SINE MIR 215 249 -13 206 277 15 66 chr10 72692925 72693062 -67623703 + L2 LINE L2 2930 3059 -213 567 224 15 22 chr10 72693937 72694071 -67622694 - MIR SINE MIR -102 160 28 373 279 31 47 chr10 72694086 72694215 -67622550 - MIR SINE MIR -70 192 66 192 320 13 13 chr10 72694970 72695048 -67621717 - MIR3 SINE MIR -19 189 112 304 279 153 0 chr10 72695428 72695539 -67621226 - L2 LINE L2 0 3313 3186 282 279 0 0 chr10 72696526 72696594 -67620171 - L2 LINE L2 -6 3266 3199 303 277 46 46 chr10 72696742 72696872 -67619893 - L1ME4a LINE L1 -26 6095 5966 381 251 98 41 chr10 72697032 72697327 -67619438 + L1MC5 LINE L1 7613 7924 -37 307 289 28 59 chr10 72697390 72697586 -67619179 + MIR3 SINE MIR 15 202 -6 2262 110 3 0 chr10 72697658 72697968 -67618797 - AluSq SINE Alu -2 311 1 630 221 114 13 chr10 72698032 72698181 -67618584 - MER103 DNA DNA -1 165 2 2204 100 0 3 chr10 72698181 72698481 -67618284 - AluSc SINE Alu -9 300 2 226 310 168 9 chr10 72698870 72698983 -67617782 + MIR SINE MIR 16 146 -62 * 794 299 9 0 chr10 72698976 72699190 -67617575 - MIR SINE MIR 0 262 47 347 129 0 43 chr10 72699480 72699550 -67617215 - MIR SINE MIR -57 151 85 568 248 33 7 chr10 72700004 72700153 -67616612 - MIR SINE MIR -61 147 34 195 277 96 21 chr10 72700454 72700548 -67616217 - MIR SINE MIR -50 212 112 572 291 36 0 chr10 72701415 72701580 -67615185 + MIR SINE MIR 36 206 -56 688 240 7 7 chr10 72701645 72701795 -67614970 + MIR SINE MIR 8 157 -105 1018 153 12 0 chr10 72701802 72701972 -67614793 + FRAM SINE Alu 1 172 -4 575 176 76 0 chr10 72702757 72702876 -67613889 - L1MB4 LINE L1 -2 6178 6051 21 0 0 0 chr10 72702909 72702930 -67613835 + AT_rich Low_complexity Low_complexity 1 21 0 483 269 151 46 chr10 72702960 72702986 -67613779 - L1ME4a LINE L1 -69 6052 6030 1300 173 23 0 chr10 72702986 72703200 -67613565 + MER20 DNA MER1_type 1 219 0 483 269 151 46 chr10 72703200 72703545 -67613220 - L1ME4a LINE L1 -91 6030 5642 606 239 188 26 chr10 72704207 72704516 -67612249 - L2 LINE L2 0 3313 2955 748 264 39 10 chr10 72704995 72705203 -67611562 + MIR SINE MIR 48 261 -1 2001 158 0 0 chr10 72705287 72705598 -67611167 + AluJb SINE Alu 1 311 -1 572 307 33 19 chr10 72705631 72705846 -67610919 - MIR SINE MIR -23 239 22 249 33 0 0 chr10 72706953 72706983 -67609782 + (TCTCCC)n Simple_repeat Simple_repeat 5 34 0 208 311 46 20 chr10 72707198 72707349 -67609416 + L2 LINE L2 1940 2094 -1220 405 0 0 0 chr10 72707618 72707663 -67609102 + (TG)n Simple_repeat Simple_repeat 1 45 0 1873 139 7 0 chr10 72707689 72707969 -67608796 - AluSx SINE Alu -30 282 1 614 312 75 0 chr10 72708138 72708337 -67608428 + MIR SINE MIR 49 262 0 879 242 94 0 chr10 72709176 72709399 -67607366 - MIR SINE MIR -6 256 13 246 257 122 65 chr10 72709387 72709601 -67607164 + L2 LINE L2 3088 3313 0 * 282 56 0 0 chr10 72709894 72709930 -67606835 + (TG)n Simple_repeat Simple_repeat 2 37 0 2168 93 7 0 chr10 72710526 72710815 -67605950 - AluSx SINE Alu -21 291 1 180 214 0 0 chr10 72710820 72710862 -67605903 + L2 LINE L2 3230 3271 -1 753 233 34 34 chr10 72711562 72711768 -67604997 - MIR SINE MIR 0 262 57 1018 273 82 25 chr10 72712566 72712699 -67604066 + MER113 DNA MER1_type? 40 164 -357 219 103 0 0 chr10 72712699 72712738 -67604027 + (ACTAG)n Simple_repeat Simple_repeat 5 43 0 1018 273 82 25 chr10 72712738 72713004 -67603761 + MER113 DNA MER1_type? 164 462 -59 304 304 16 24 chr10 72714231 72714356 -67602409 - MER5B DNA MER1_type -5 173 50 218 300 0 17 chr10 72714418 72714478 -67602287 + L2 LINE L2 3204 3262 -10 597 262 94 21 chr10 72714620 72714811 -67601954 + MIR SINE MIR 43 247 -15 309 243 65 47 chr10 72715216 72715385 -67601380 - Charlie7 DNA MER1_type 0 2612 2441 1987 117 30 0 chr10 72715385 72715683 -67601082 + AluSq SINE Alu 1 307 -6 180 245 0 0 chr10 72716480 72716533 -67600232 + (TG)n Simple_repeat Simple_repeat 2 54 0 1952 120 33 13 chr10 72716719 72717018 -67599747 + AluSx SINE Alu 1 305 -7 401 255 39 0 chr10 72717044 72717146 -67599619 - Charlie7 DNA MER1_type -2506 106 1 372 252 9 37 chr10 72717505 72717612 -67599153 + MIR SINE MIR 23 126 -136 331 326 27 14 chr10 72717780 72717927 -67598838 - MLT1I LTR MaLR -189 220 72 233 343 21 29 chr10 72719056 72719196 -67597569 + L2 LINE L2 3134 3272 0 575 313 135 34 chr10 72720665 72721291 -67595474 - L2 LINE L2 0 3313 2599 281 385 21 7 chr10 72721590 72721733 -67595032 + MIR3 SINE MIR 49 193 -15 617 278 67 5 chr10 72722021 72722215 -67594550 + MIR SINE MIR 37 242 -20 1070 132 0 0 chr10 72722223 72722382 -67594383 + FRAM SINE Alu 4 162 -14 324 0 0 0 chr10 72722401 72722437 -67594328 + (TTA)n Simple_repeat Simple_repeat 3 38 0 433 260 0 10 chr10 72722438 72722538 -67594227 - MIR SINE MIR -59 149 51 252 0 0 0 chr10 72723063 72723091 -67593674 + (A)n Simple_repeat Simple_repeat 1 28 0 1797 229 44 7 chr10 72723484 72723938 -67592827 + Charlie4a DNA MER1_type 36 506 -2 246 32 0 0 chr10 72725038 72725069 -67591696 + (ATG)n Simple_repeat Simple_repeat 2 32 0 209 277 43 53 chr10 72726050 72726144 -67590621 + MIR SINE MIR 59 151 -57 2014 130 3 0 chr10 72726172 72726464 -67590301 - AluSx SINE Alu -19 293 1 190 259 35 0 chr10 72726590 72726648 -67590117 - MIR SINE MIR -68 140 81 681 251 212 21 chr10 72726776 72727106 -67589659 - L2 LINE L2 -1 3312 2920 1448 218 78 47 chr10 72727246 72727672 -67589093 + L1MB5 LINE L1 5730 6168 -6 1848 179 0 0 chr10 72727680 72727988 -67588777 - AluJo SINE Alu -4 308 1 785 264 79 22 chr10 72728088 72728365 -67588400 - L2 LINE L2 -735 2579 2287 341 291 76 52 chr10 72728367 72728539 -67588226 + MER63A DNA MER1_type 7 182 -28 286 294 4 140 chr10 72728565 72728629 -67588136 - L2 LINE L2 -1055 2259 2188 1690 157 10 13 chr10 72728629 72728934 -67587831 + AluJb SINE Alu 1 304 -8 286 294 4 140 chr10 72728934 72729148 -67587617 - L2 LINE L2 -1126 2188 2019 799 266 77 18 chr10 72729519 72729805 -67586960 + L1ME1 LINE L1 5847 6149 -17 224 344 69 8 chr10 72729994 72730125 -67586640 - L2 LINE L2 -508 2806 2668 208 341 7 7 chr10 72730417 72730497 -67586268 + CT-rich Low_complexity Low_complexity 1 83 -52 2830 101 25 41 chr10 72730497 72730932 -67585833 - MSTC LTR MaLR 0 428 1 208 341 7 7 chr10 72730932 72730986 -67585779 + CT-rich Low_complexity Low_complexity 82 135 0 193 286 118 0 chr10 72731411 72731530 -67585235 - MIR3 SINE MIR -74 134 2 298 229 11 45 chr10 72733243 72733429 -67583336 + GA-rich Low_complexity Low_complexity 1 192 -382 1708 140 122 18 chr10 72733429 72733757 -67583008 - MLT1A1 LTR MaLR -3 362 1 298 229 11 45 chr10 72733757 72733838 -67582927 + GA-rich Low_complexity Low_complexity 192 574 0 1725 133 46 7 chr10 72733904 72734189 -67582576 + AluJo SINE Alu 1 296 -16 192 333 111 15 chr10 72734211 72734346 -67582419 - MIR3 SINE MIR -34 174 27 534 297 135 4 chr10 72735057 72735286 -67581479 - MIR SINE MIR 0 262 4 454 262 37 0 chr10 72735792 72735899 -67580866 - MIR SINE MIR -89 173 63 232 340 110 26 chr10 72737207 72737398 -67579367 + MIR SINE MIR 2 208 -54 1021 128 20 67 chr10 72738070 72738136 -67578629 - MER5A DNA MER1_type -3 186 118 2281 89 0 19 chr10 72738136 72738450 -67578315 + AluSg SINE Alu 3 310 0 1021 128 20 67 chr10 72738450 72738578 -67578187 - MER5A DNA MER1_type -71 118 1 609 226 40 57 chr10 72738588 72738765 -67578000 - MER5B DNA MER1_type -2 176 3 310 313 88 7 chr10 72738847 72738994 -67577771 - MER5B DNA MER1_type -6 172 14 615 227 74 17 chr10 72739206 72739382 -67577383 + MER5A DNA MER1_type 1 186 -3 1773 141 3 60 chr10 72739463 72739784 -67576981 + AluSx SINE Alu 1 304 0 222 336 8 67 chr10 72740010 72740058 -67576707 + MIR SINE MIR 2 51 -211 2212 101 3 7 chr10 72740058 72740366 -67576399 - AluSx SINE Alu -5 307 1 222 336 8 67 chr10 72740366 72740451 -67576314 + MIR SINE MIR 51 127 -135 200 288 61 0 chr10 72740682 72740748 -67576017 + MIR SINE MIR 186 255 -7 271 298 12 0 chr10 72740766 72740850 -67575915 + L1MC4a LINE L1 5829 5913 -1895 224 263 0 18 chr10 72743092 72743149 -67573616 + C-rich Low_complexity Low_complexity 1 56 0 362 139 139 0 chr10 72744748 72744834 -67571931 - MLT1K LTR MaLR 0 588 491 813 107 8 8 chr10 72744847 72744968 -67571797 + AluSq/x SINE Alu 1 121 -191 555 267 185 9 chr10 72745153 72745385 -67571380 - MLT1K LTR MaLR -232 356 84 186 222 0 0 chr10 72746584 72746620 -67570145 + MIR SINE MIR 109 144 -118 659 231 0 35 chr10 72747246 72747415 -67569350 + MER8 DNA MER2_type 77 239 0 590 221 45 26 chr10 72747424 72747578 -67569187 - MIR SINE MIR -92 170 14 331 359 6 11 chr10 72747986 72748256 -67568509 + (TG)n Simple_repeat Simple_repeat 1 268 0 189 74 0 0 chr10 72748523 72748550 -67568215 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 502 344 68 56 chr10 72748550 72748839 -67567926 - L2 LINE L2 -13 3259 2964 1586 163 0 75 chr10 72748839 72749159 -67567606 + AluJb SINE Alu 1 296 -16 502 344 68 56 chr10 72749159 72749224 -67567541 - L2 LINE L2 -308 2964 2901 471 233 139 39 chr10 72750134 72750314 -67566451 + MIR SINE MIR 57 254 -8 221 316 35 18 chr10 72750333 72750447 -67566318 + MIR3 SINE MIR 10 125 -83 450 313 91 29 chr10 72751269 72751477 -67565288 + MIR SINE MIR 19 239 -23 671 238 12 0 chr10 72751750 72751910 -67564855 + MER45A DNA AcHobo 17 178 0 1134 253 75 39 chr10 72752035 72752581 -67564184 - MLT1G LTR MaLR 0 590 25 222 336 17 34 chr10 72753385 72753504 -67563261 - MIR SINE MIR -75 133 17 347 331 72 12 chr10 72753541 72753707 -67563058 + MIR3 SINE MIR 17 192 -16 312 342 99 31 chr10 72754043 72754426 -67562339 - L2 LINE L2 -42 3271 2863 213 232 74 32 chr10 72754524 72754619 -67562146 - L2 LINE L2 -654 2660 2562 417 340 92 0 chr10 72754792 72754977 -67561788 + MIR SINE MIR 50 251 -11 207 69 0 0 chr10 72755507 72755536 -67561229 + (CA)n Simple_repeat Simple_repeat 2 30 0 398 114 14 0 chr10 72755836 72755906 -67560859 + (GA)n Simple_repeat Simple_repeat 2 72 0 406 305 28 21 chr10 72756265 72756406 -67560359 - MIR SINE MIR -114 148 7 382 245 39 20 chr10 72756502 72756604 -67560161 + MIR3 SINE MIR 74 177 -31 386 285 59 27 chr10 72757159 72757345 -67559420 + MER112 DNA MER1_type 37 228 -32 2012 107 43 10 chr10 72757539 72757838 -67558927 - AluSc SINE Alu 0 309 1 564 297 47 16 chr10 72757839 72757879 -67558886 + MIR SINE MIR 63 100 -162 1213 268 113 48 chr10 72757879 72758357 -67558408 - MLT1J LTR MaLR 0 511 3 564 297 47 16 chr10 72758357 72758508 -67558257 + MIR SINE MIR 100 260 -2 400 307 113 39 chr10 72758494 72758725 -67558040 - MIR SINE MIR 0 262 15 * 287 282 74 63 chr10 72758961 72759114 -67557651 + MIR SINE MIR 28 192 -62 357 267 40 23 chr10 72759339 72759515 -67557250 + (CCCCG)n Simple_repeat Simple_repeat 2 180 0 1112 232 142 35 chr10 72760371 72760793 -67555972 - MLT1C LTR MaLR 0 467 1 766 274 0 0 chr10 72761179 72761358 -67555407 + MIR SINE MIR 84 262 0 1197 136 0 0 chr10 72761430 72761607 -67555158 + AluSg/x SINE Alu 118 294 -16 193 238 0 0 chr10 72761630 72761672 -67555093 + L2 LINE L2 3210 3251 -21 588 281 6 19 chr10 72762202 72762362 -67554403 - MIR SINE MIR 0 262 105 197 239 26 18 chr10 72762395 72762508 -67554257 + CT-rich Low_complexity Low_complexity 1 114 0 575 258 15 0 chr10 72762634 72762766 -67553999 - L2 LINE L2 -1 3312 3179 374 290 134 37 chr10 72762808 72763025 -67553740 + L2 LINE L2 2475 2712 -602 267 282 100 18 chr10 72763055 72763225 -67553540 - L2 LINE L2 -294 3019 2836 233 276 112 0 chr10 72763534 72763632 -67553133 + MER117 DNA MER1_type 53 161 -36 213 39 0 0 chr10 72764936 72764962 -67551803 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 471 35 0 0 chr10 72764961 72765018 -67551747 + (TG)n Simple_repeat Simple_repeat 1 57 0 583 318 42 38 chr10 72766068 72766304 -67550461 + MIR SINE MIR 18 254 -8 246 356 60 52 chr10 72766894 72767058 -67549707 + L2 LINE L2 3029 3197 -116 2074 125 0 7 chr10 72767058 72767355 -67549410 - AluSc SINE Alu -14 295 1 246 356 60 52 chr10 72767355 72767457 -67549308 + L2 LINE L2 3197 3297 -16 1273 58 0 0 chr10 72767462 72767617 -67549148 + AluSg/x SINE Alu 137 291 -21 186 200 22 22 chr10 72768326 72768371 -67548394 - L2 LINE L2 -556 2758 2714 2102 112 13 16 chr10 72768566 72768871 -67547894 - AluSx SINE Alu -8 304 1 577 214 39 73 chr10 72769328 72769506 -67547259 + MIR SINE MIR 32 203 -59 356 312 112 24 chr10 72769550 72769845 -67546920 - L2 LINE L2 -13 3259 2939 215 379 58 29 chr10 72770280 72770454 -67546311 + MIR3 SINE MIR 26 204 -4 256 305 105 0 chr10 72770735 72770830 -67545935 - L2 LINE L2 -2 3311 3207 572 284 29 39 chr10 72771213 72771417 -67545348 + MIR SINE MIR 15 216 -46 479 181 14 101 chr10 72772161 72772299 -67544466 - MIR SINE MIR -42 220 95 289 319 17 17 chr10 72772897 72773016 -67543749 + MIR SINE MIR 23 141 -67 640 227 15 81 chr10 72773103 72773301 -67543464 - MIR SINE MIR -22 240 56 2289 95 3 7 chr10 72773507 72773812 -67542953 - AluSx SINE Alu -8 304 1 2121 122 0 0 chr10 72773950 72774245 -67542520 + AluSx SINE Alu 1 295 -17 970 179 6 0 chr10 72775367 72775535 -67541230 - FRAM SINE Alu -7 169 1 405 258 114 0 chr10 72775847 72775979 -67540786 - MIR3 SINE MIR -6 202 56 517 341 49 16 chr10 72776411 72776657 -67540108 - L2 LINE L2 -5 3267 3014 295 330 27 18 chr10 72777579 72777691 -67539074 - MIR SINE MIR -64 144 32 292 319 53 102 chr10 72777675 72777960 -67538805 + L2 LINE L2 2809 3079 -193 * 1618 134 29 7 chr10 72778077 72778352 -67538413 + AluSx SINE Alu 7 287 -25 254 292 0 62 chr10 72778366 72778544 -67538221 + CT-rich Low_complexity Low_complexity 5 171 0 417 317 11 33 chr10 72778572 72778755 -67538010 + C-rich Low_complexity Low_complexity 2 180 0 266 283 0 7 chr10 72778784 72778937 -67537828 + C-rich Low_complexity Low_complexity 1 152 0 304 308 79 44 chr10 72778998 72779225 -67537540 - HAL1 LINE L1 -1291 1216 982 273 174 9 46 chr10 72779267 72779376 -67537389 + CT-rich Low_complexity Low_complexity 2 106 0 453 216 11 68 chr10 72779437 72779627 -67537138 + CT-rich Low_complexity Low_complexity 1 179 0 2085 114 3 13 chr10 72779906 72780213 -67536552 - AluSx SINE Alu -8 304 1 814 146 8 0 chr10 72780741 72780864 -67535901 + FLAM_C SINE Alu 2 125 -18 264 59 0 0 chr10 72781131 72781165 -67535600 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 532 226 36 15 chr10 72781180 72781317 -67535448 + MIR SINE MIR 20 159 -103 192 270 0 68 chr10 72781309 72781383 -67535382 + L2 LINE L2 3194 3262 -10 * 236 263 18 0 chr10 72782045 72782102 -67534663 + CT-rich Low_complexity Low_complexity 1 58 0 1967 109 7 7 chr10 72782910 72783205 -67533560 + AluSq SINE Alu 25 313 0 499 267 174 5 chr10 72783552 72783739 -67533026 + MIR SINE MIR 9 217 -45 359 224 68 117 chr10 72783964 72784169 -67532596 - MIR3 SINE MIR -5 203 9 450 277 145 24 chr10 72784212 72784378 -67532387 - MER5A DNA MER1_type 0 189 4 401 359 0 21 chr10 72784608 72784753 -67532012 + MER91A DNA MER1_type 55 196 0 242 259 17 0 chr10 72786982 72787040 -67529725 - L2 LINE L2 -7 3265 3207 369 352 0 0 chr10 72787596 72788099 -67528666 + (TGG)n Simple_repeat Simple_repeat 1 503 0 236 357 0 0 chr10 72788121 72788264 -67528501 + (TGG)n Simple_repeat Simple_repeat 2 144 0 425 225 101 22 chr10 72790002 72790140 -67526625 + MIR SINE MIR 114 262 0 195 331 74 33 chr10 72790354 72790475 -67526290 - L2 LINE L2 -1 3271 3146 347 255 130 19 chr10 72790508 72790669 -67526096 - MLT1J2 LTR MaLR 0 450 272 548 252 26 32 chr10 72791090 72791245 -67525520 - MIR SINE MIR -28 234 81 393 314 17 8 chr10 72791742 72791860 -67524905 - MIR3 SINE MIR -19 189 71 221 224 51 61 chr10 72791835 72791933 -67524832 - L2 LINE L2 -42 3230 3134 * 366 300 53 12 chr10 72791971 72792132 -67524633 - MIR SINE MIR -55 153 20 697 264 57 0 chr10 72792179 72792372 -67524393 - MER63A DNA MER1_type -5 205 2 663 199 19 13 chr10 72792663 72792819 -67523946 - MIR SINE MIR -33 229 73 252 167 0 0 chr10 72793094 72793142 -67523623 + CT-rich Low_complexity Low_complexity 4 51 0 421 340 59 10 chr10 72795367 72795570 -67521195 - MIR SINE MIR -13 249 37 1682 183 3 13 chr10 72796426 72796726 -67520039 + AluJo SINE Alu 1 297 -15 416 236 55 0 chr10 72796755 72796865 -67519900 + L2 LINE L2 2717 2832 -482 199 310 89 52 chr10 72797522 72797793 -67518972 + L2 LINE L2 2804 3084 -229 930 287 55 4 chr10 72797876 72798113 -67518652 + MIR SINE MIR 12 260 -2 291 301 36 0 chr10 72798149 72798232 -67518533 + L2 LINE L2 3172 3257 -15 265 287 39 68 chr10 72798971 72799144 -67517621 + MIR SINE MIR 1 167 -41 2143 129 0 0 chr10 72799144 72799439 -67517326 + AluSx SINE Alu 1 295 -17 184 343 14 0 chr10 72800218 72800291 -67516474 + MIR3 SINE MIR 81 154 -54 231 275 0 25 chr10 72801863 72801943 -67514822 + GA-rich Low_complexity Low_complexity 2 79 0 758 260 72 17 chr10 72802360 72802595 -67514170 + MIR SINE MIR 15 262 0 205 244 70 23 chr10 72802698 72802784 -67513981 + MIR SINE MIR 85 175 -33 344 335 168 15 chr10 72803051 72803254 -67513511 + L3 LINE CR1 1344 1577 0 23 0 0 0 chr10 72803428 72803451 -67513314 + AT_rich Low_complexity Low_complexity 1 23 0 504 305 66 3 chr10 72805377 72805581 -67511184 + MIR SINE MIR 33 250 -12 382 303 14 7 chr10 72806562 72806704 -67510061 + MER117 DNA MER1_type 55 197 0 21 0 0 0 chr10 72808649 72808670 -67508095 + AT_rich Low_complexity Low_complexity 1 21 0 493 317 74 49 chr10 72808683 72808803 -67507962 - MLT1K LTR MaLR -74 514 398 2147 114 18 75 chr10 72808803 72809189 -67507576 - THE1B LTR MaLR 0 364 1 493 317 74 49 chr10 72809189 72809434 -67507331 - MLT1K LTR MaLR -190 398 140 330 321 54 52 chr10 72809632 72810017 -67506748 - L2 LINE L2 -179 3093 2706 535 275 28 17 chr10 72810695 72810873 -67505892 + Charlie8 DNA MER1_type 41 220 -2197 1311 224 153 40 chr10 72810957 72811407 -67505358 - MLT1D LTR MaLR 0 505 5 436 190 146 66 chr10 72811411 72811548 -67505217 + MIR SINE MIR 115 262 0 260 378 31 26 chr10 72813646 72813839 -67502926 - L2 LINE L2 -470 2844 2651 232 298 73 48 chr10 72815508 72815632 -67501133 - MIR SINE MIR -65 143 17 690 243 78 30 chr10 72815813 72816109 -67500656 + MER102a DNA MER1_type 4 313 -17 205 273 18 0 chr10 72816125 72816180 -67500585 - MIR3 SINE MIR -47 161 106 245 323 15 0 chr10 72816312 72816377 -67500388 - MIR SINE MIR -113 95 30 575 243 46 58 chr10 72816610 72816869 -67499896 - MER102a DNA MER1_type -2 328 73 1857 156 0 34 chr10 72817824 72818145 -67498620 + AluJo SINE Alu 1 310 -2 255 316 13 0 chr10 72818491 72818570 -67498195 + MIR3 SINE MIR 81 160 -48 270 0 0 0 chr10 72819460 72819490 -67497275 + (CA)n Simple_repeat Simple_repeat 2 31 0 469 174 47 121 chr10 72819767 72819916 -67496849 - MIR3 SINE MIR -13 195 58 617 330 35 5 chr10 72820442 72820645 -67496120 - MIR SINE MIR -34 228 20 987 140 0 0 chr10 72821198 72821341 -67495424 + AluJo SINE Alu 1 143 -169 733 278 79 8 chr10 72821672 72821938 -67494827 - L2 LINE L2 -203 3110 2826 1899 91 33 65 chr10 72823330 72823637 -67493128 - AluY SINE Alu -10 301 5 643 292 91 5 chr10 72823753 72823972 -67492793 - MLT1K LTR MaLR -330 258 21 356 245 242 18 chr10 72824819 72825007 -67491758 - MIR SINE MIR -25 237 20 915 301 25 0 chr10 72826106 72826345 -67490420 - MIR SINE MIR -16 246 2 201 175 0 0 chr10 72826696 72826736 -67490029 + (CA)n Simple_repeat Simple_repeat 2 41 0 239 139 23 0 chr10 72826756 72826799 -67489966 - MIR SINE MIR -106 156 113 208 226 153 65 chr10 72826766 72826890 -67489875 - MIR3 SINE MIR -62 146 12 * 550 136 0 0 chr10 72827829 72827910 -67488855 - AluJo/F(R)AM SINE Alu -98 214 134 1513 140 117 15 chr10 72827910 72828174 -67488591 - AluJo SINE Alu -21 291 1 259 256 37 0 chr10 72828298 72828380 -67488385 - LTR16A1 LTR ERVL 0 457 373 284 253 33 11 chr10 72828489 72828580 -67488185 - LTR16C LTR ERVL -242 249 157 276 260 28 133 chr10 72828787 72828865 -67487900 - MIR SINE MIR -42 220 170 2455 58 0 10 chr10 72828865 72829176 -67487589 - AluY SINE Alu -3 308 1 276 260 28 133 chr10 72829176 72829278 -67487487 - MIR SINE MIR -92 170 59 308 270 54 36 chr10 72829289 72829400 -67487365 - L2 LINE L2 -5 3267 3155 194 244 0 0 chr10 72831454 72831499 -67485266 - MIR SINE MIR -5 257 213 952 195 0 6 chr10 72831523 72831692 -67485073 + FRAM SINE Alu 1 166 -10 540 203 61 66 chr10 72831779 72831976 -67484789 - MER21B LTR ERV1 -19 844 649 2782 210 74 17 chr10 72832009 72832656 -67484109 - MER21B LTR ERV1 -179 684 1 267 331 12 100 chr10 72832870 72833199 -67483566 - L2 LINE L2 -32 3240 2941 356 280 43 48 chr10 72833918 72834100 -67482665 + MIR3 SINE MIR 1 172 -61 584 360 114 14 chr10 72835749 72836110 -67480655 - L2 LINE L2 -26 3246 2850 216 284 123 0 chr10 72836134 72836215 -67480550 - MIR SINE MIR -74 188 98 316 279 9 54 chr10 72836352 72836463 -67480302 - MIR SINE MIR -111 151 46 246 306 89 33 chr10 72837032 72837212 -67479553 + Charlie8 DNA MER1_type 4 193 -2224 333 323 118 16 chr10 72838169 72838355 -67478410 + MIR SINE MIR 4 208 -54 328 246 77 9 chr10 72839082 72839195 -67477570 + MIR SINE MIR 35 153 -65 221 404 46 0 chr10 72840064 72840173 -67476592 + L2 LINE L2 3126 3239 -33 575 280 169 13 chr10 72840362 72840587 -67476178 + MIR SINE MIR 2 261 -1 313 306 36 9 chr10 72841223 72841334 -67475431 + MER91A DNA MER1_type 1 114 -82 476 277 70 18 chr10 72841576 72841768 -67474997 + MIR SINE MIR 12 214 -48 1864 219 73 6 chr10 72841794 72842310 -67474455 - MLT1H LTR MaLR -2 540 7 460 253 8 132 chr10 72842924 72843287 -67473478 - MLT1J LTR MaLR -193 318 1 207 86 0 29 chr10 72843324 72843359 -67473406 + (CCCCCA)n Simple_repeat Simple_repeat 6 39 0 357 82 0 0 chr10 72844091 72844140 -67472625 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 312 315 79 36 chr10 72844269 72844434 -67472331 - L2 LINE L2 -211 3061 2890 334 342 182 9 chr10 72845056 72845287 -67471478 - L2 LINE L2 0 3272 3002 249 313 111 59 chr10 72846578 72846766 -67469999 + MIR SINE MIR 36 228 -34 412 233 53 8 chr10 72846772 72846905 -67469860 - MER117 DNA MER1_type 0 197 59 813 222 6 22 chr10 72848334 72848514 -67468251 - FRAM SINE Alu -1 175 1 344 250 22 0 chr10 72849351 72849443 -67467322 - MER94 DNA DNA -39 95 2 191 250 0 21 chr10 72851323 72851371 -67465394 + L3 LINE CR1 1520 1566 -11 314 279 49 16 chr10 72852904 72853026 -67463739 - MIR SINE MIR -24 238 113 685 236 0 14 chr10 72853654 72853798 -67462967 + MIR SINE MIR 51 192 -70 564 324 47 6 chr10 72853830 72854000 -67462765 + MIR3 SINE MIR 18 194 -14 186 192 154 0 chr10 72854131 72854183 -67462582 - L2 LINE L2 -2 3311 3252 671 168 46 0 chr10 72854904 72855035 -67461730 + L1MB4 LINE L1 6044 6180 0 577 285 73 15 chr10 72855397 72855657 -67461108 - L1MC/D LINE L1 -2001 5807 5533 720 128 0 0 chr10 72857093 72857195 -67459570 + AluJ/FLAM SINE Alu 1 102 -210 1626 118 67 67 chr10 72858112 72858237 -67458528 + AluSx SINE Alu 1 125 -187 2081 108 7 7 chr10 72858237 72858532 -67458233 + AluSx SINE Alu 1 295 -17 1626 118 67 67 chr10 72858532 72858703 -67458062 + AluSx SINE Alu 124 297 -15 824 144 8 0 chr10 72858705 72858830 -67457935 - FLAM_C SINE Alu -17 126 1 417 284 51 28 chr10 72858836 72859004 -67457761 - MIR SINE MIR -77 185 12 758 103 0 0 chr10 72859422 72859519 -67457246 - AluS SINE Alu -211 102 6 998 182 0 28 chr10 72859526 72859707 -67457058 + AluJo SINE Alu 121 296 -16 2011 114 10 17 chr10 72859714 72860004 -67456761 + AluSx SINE Alu 1 288 -24 543 101 0 0 chr10 72860007 72860086 -67456679 + (CA)n Simple_repeat Simple_repeat 2 80 0 328 267 19 28 chr10 72860090 72860197 -67456568 - L1MCa LINE L1 -1339 6983 1996 * 334 257 0 14 chr10 72860164 72860238 -67456527 - L1MCa LINE L1 -4358 2068 1996 230 176 108 0 chr10 72860259 72860333 -67456432 - L1MC4 LINE L1 -1347 6695 6614 1053 150 0 0 chr10 72860338 72860518 -67456247 + (TA)n Simple_repeat Simple_repeat 1 180 0 250 299 58 0 chr10 72863184 72863271 -67453494 + MIR SINE MIR 101 192 -70 823 183 0 0 chr10 72863352 72863494 -67453271 - FLAM_C SINE Alu -1 142 1 206 400 40 24 chr10 72864194 72864319 -67452446 - MIR3 SINE MIR 0 208 82 550 281 120 0 chr10 72864406 72864573 -67452192 - MIR SINE MIR -31 231 45 888 252 59 68 chr10 72864597 72864934 -67451831 + MER102b DNA MER1_type 2 335 -6 212 310 108 19 chr10 72864958 72865116 -67451649 - MIR3 SINE MIR -25 183 12 286 190 23 150 chr10 72866627 72866760 -67450005 + MIR SINE MIR 26 147 -61 647 258 89 5 chr10 72866805 72866995 -67449770 - MIR SINE MIR -19 243 38 264 253 0 27 chr10 72867160 72867235 -67449530 - L2 LINE L2 0 3313 3241 192 161 0 0 chr10 72868298 72868329 -67448436 - MIR SINE MIR -27 235 205 2190 85 0 0 chr10 72868345 72868657 -67448108 - AluSx SINE Alu 0 312 1 1627 164 17 37 chr10 72868667 72868966 -67447799 - AluJo SINE Alu -19 293 1 927 212 25 20 chr10 72868969 72869172 -67447593 - MIR SINE MIR -46 216 13 1491 174 51 68 chr10 72869303 72869757 -67447008 - MER113 DNA MER1_type? -73 448 3 208 363 151 27 chr10 72869758 72869904 -67446861 - MIR3 SINE MIR -2 206 43 219 303 225 11 chr10 72869905 72870083 -67446682 + L3b LINE CR1 1162 1377 -206 510 341 67 14 chr10 72870380 72870603 -67446162 - MIR SINE MIR 0 262 28 260 292 14 0 chr10 72872799 72872871 -67443894 - MIR SINE MIR -73 135 63 196 315 189 9 chr10 72874022 72874133 -67442632 + L2 LINE L2 3183 3313 0 342 0 0 0 chr10 72874238 72874276 -67442489 + (CA)n Simple_repeat Simple_repeat 1 38 0 354 221 95 0 chr10 72876242 72876337 -67440428 - MIR3 SINE MIR -24 184 81 523 262 133 33 chr10 72876688 72877102 -67439663 - LTR33 LTR ERVL 0 523 59 335 219 85 0 chr10 72877543 72877625 -67439140 + MER117 DNA MER1_type 60 148 -49 226 296 123 28 chr10 72878614 72878724 -67438041 + MIR SINE MIR 45 163 -63 609 223 81 6 chr10 72878740 72878916 -67437849 + MIR SINE MIR 35 222 -40 1510 148 98 32 chr10 72878947 72879224 -67437541 - AluJo SINE Alu -17 295 1 268 316 53 0 chr10 72879327 72879403 -67437362 - MIR SINE MIR -70 192 113 239 150 0 27 chr10 72879741 72879808 -67436957 + MIR SINE MIR 104 147 -61 282 333 41 0 chr10 72880234 72880357 -67436408 - Charlie8 DNA MER1_type -2199 218 91 2201 236 130 13 chr10 72880360 72881343 -67435422 - L2 LINE L2 -6 3307 2195 192 352 34 0 chr10 72881968 72882056 -67434709 - MIR3 SINE MIR -14 194 104 322 287 113 13 chr10 72882559 72882709 -67434056 - MIR SINE MIR -82 180 16 318 376 52 6 chr10 72883582 72883755 -67433010 + MIR3 SINE MIR 28 208 0 273 236 9 45 chr10 72884850 72884960 -67431805 + CT-rich Low_complexity Low_complexity 1 106 0 207 311 66 9 chr10 72885980 72886086 -67430679 - MER91A DNA MER1_type -40 156 45 * 707 287 66 20 chr10 72886005 72886249 -67430516 + MIR SINE MIR 8 262 0 376 286 34 57 chr10 72886494 72886669 -67430096 + MIR3 SINE MIR 38 208 0 2177 113 0 19 chr10 72886673 72886984 -67429781 - AluSx SINE Alu -7 305 1 294 399 8 23 chr10 72887064 72887197 -67429568 + MIR3 SINE MIR 13 143 -65 321 297 126 8 chr10 72887350 72887501 -67429264 - MIR3 SINE MIR -52 156 21 560 144 0 10 chr10 72887513 72887610 -67429155 - L1PB4 LINE L1 0 6156 6061 4393 136 10 14 chr10 72887672 72888239 -67428526 - L1PB4 LINE L1 -97 6059 5491 2102 118 0 7 chr10 72888239 72888535 -67428230 - AluSx SINE Alu -17 295 2 4393 136 10 14 chr10 72888535 72888636 -67428129 - L1PB4 LINE L1 -665 5491 5392 2322 92 0 0 chr10 72888636 72888941 -67427824 - AluY SINE Alu -6 305 1 4393 136 10 14 chr10 72888941 72889001 -67427764 - L1PB4 LINE L1 -764 5392 5333 2506 74 0 0 chr10 72891750 72892062 -67424703 - AluSq SINE Alu -1 312 1 520 312 77 68 chr10 72892167 72892724 -67424041 + L1MC/D LINE L1 4669 5230 -916 2364 84 0 0 chr10 72892731 72893041 -67423724 + AluSx SINE Alu 3 312 0 216 0 0 0 chr10 72893042 72893066 -67423699 + (TA)n Simple_repeat Simple_repeat 2 25 0 465 342 138 0 chr10 72893101 72893332 -67423433 + L1MC/D LINE L1 5311 5573 -2235 203 277 9 54 chr10 72893846 72893958 -67422807 + CT-rich Low_complexity Low_complexity 2 108 0 308 263 57 78 chr10 72894048 72894175 -67422590 - L1M2 LINE L1 -613 5541 5440 2182 108 3 13 chr10 72894175 72894491 -67422274 - AluSq SINE Alu 0 313 1 308 263 57 78 chr10 72894491 72894576 -67422189 - L1M2 LINE L1 -714 5440 5355 270 319 64 38 chr10 72894806 72894963 -67421802 + L1ME LINE L1 5422 5582 -539 243 287 9 26 chr10 72895849 72895964 -67420801 + CT-rich Low_complexity Low_complexity 4 116 0 252 59 0 0 chr10 72896226 72896260 -67420505 + (GGA)n Simple_repeat Simple_repeat 2 35 0 524 135 21 10 chr10 72896773 72896869 -67419896 - L1MB2 LINE L1 0 6171 6075 188 263 53 0 chr10 72896880 72896937 -67419828 - L2 LINE L2 -3 3269 3210 * 449 197 10 150 chr10 72896905 72897098 -67419667 - MIR SINE MIR -24 238 73 239 352 33 0 chr10 72898250 72898341 -67418424 - MIR3 SINE MIR -34 174 81 193 314 0 0 chr10 72900179 72900230 -67416535 - L2 LINE L2 -17 3255 3205 572 224 8 8 chr10 72900672 72900797 -67415968 + L2 LINE L2 3188 3312 -1 2418 77 6 0 chr10 72901332 72901643 -67415122 - AluSp SINE Alu 0 313 1 2207 92 0 3 chr10 72902214 72902509 -67414256 + AluSq SINE Alu 1 294 -19 214 276 17 0 chr10 72902889 72902947 -67413818 - MIR SINE MIR -121 141 83 22 35 0 0 chr10 72903731 72903760 -67413005 + AT_rich Low_complexity Low_complexity 1 29 0 205 203 34 17 chr10 72903762 72903821 -67412944 - MIR SINE MIR -67 141 82 2011 108 6 48 chr10 72903877 72904192 -67412573 + AluSx SINE Alu 1 302 -10 276 317 17 67 chr10 72904199 72904319 -67412446 + MIR SINE MIR 54 167 -95 253 309 164 0 chr10 72905405 72905515 -67411250 - MIR3 SINE MIR -78 130 3 185 209 109 91 chr10 72906600 72906710 -67410055 - L2 LINE L2 -5 3308 3197 1897 112 72 0 chr10 72906769 72907047 -67409718 - AluSg SINE Alu -12 298 1 211 261 34 23 chr10 72908311 72908399 -67408366 + (TCCA)n Simple_repeat Simple_repeat 3 91 0 391 239 6 6 chr10 72908449 72908612 -67408153 + (TCCA)n Simple_repeat Simple_repeat 3 165 0 187 339 40 40 chr10 72908975 72909149 -67407616 + L2 LINE L2 2866 3039 -233 326 265 84 0 chr10 72909184 72909267 -67407498 - MIR SINE MIR -107 155 66 2006 137 3 13 chr10 72909352 72909665 -67407100 - AluSx SINE Alu 0 312 3 361 259 0 37 chr10 72910377 72910485 -67406280 + MIR SINE MIR 57 160 -102 205 152 0 0 chr10 72910782 72910815 -67405950 + (CCTG)n Simple_repeat Simple_repeat 3 35 0 2168 105 3 7 chr10 72910988 72911293 -67405472 + AluSx SINE Alu 1 304 -8 1996 125 10 3 chr10 72913813 72914116 -67402649 + AluSx SINE Alu 1 305 -7 968 183 6 17 chr10 72914435 72914615 -67402150 + AluJo SINE Alu 117 294 -18 668 117 0 3 chr10 72914618 72914812 -67401953 + AluSx SINE Alu 4 247 -65 222 37 0 0 chr10 72914824 72914851 -67401914 + (CA)n Simple_repeat Simple_repeat 2 28 0 207 0 0 0 chr10 72914902 72914925 -67401840 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr10 72918564 72918597 -67398168 + AT_rich Low_complexity Low_complexity 1 33 0 255 275 44 11 chr10 72918641 72918732 -67398033 + MIR3 SINE MIR 82 175 -33 686 278 28 0 chr10 72921023 72921203 -67395562 + MER3 DNA MER1_type 1 185 -24 284 269 130 28 chr10 72921477 72921585 -67395180 + L2 LINE L2 3190 3308 -5 234 0 0 0 chr10 72923139 72923165 -67393600 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 365 312 107 34 chr10 72924586 72924849 -67391916 + L1ME4a LINE L1 5565 5846 -275 381 198 210 51 chr10 72925186 72925343 -67391422 - MER58A DNA MER1_type -28 196 15 1115 123 12 0 chr10 72926782 72926945 -67389820 + FRAM SINE Alu 1 162 -14 2552 42 0 10 chr10 72927303 72927616 -67389149 + AluY SINE Alu 1 310 -1 2173 110 0 0 chr10 72927633 72927933 -67388832 + AluSx SINE Alu 1 300 -12 1842 156 38 0 chr10 72928562 72928851 -67387914 + AluJb SINE Alu 1 300 -12 2624 91 22 14 chr10 72929492 72929853 -67386912 + THE1B LTR MaLR 1 364 0 1950 114 7 0 chr10 72929905 72930212 -67386553 + AluSx SINE Alu 1 309 0 249 200 0 0 chr10 72930285 72930335 -67386430 + L2 LINE L2 2200 2249 -1065 1073 256 42 16 chr10 72932454 72932763 -67384002 + MLT1I LTR MaLR 93 409 0 421 176 0 0 chr10 72933493 72933561 -67383204 - AluSg/x SINE Alu -159 153 86 1173 209 0 0 chr10 72933561 72933781 -67382984 - AluJo SINE Alu -92 220 1 189 196 0 59 chr10 72933787 72933838 -67382927 - MIR SINE MIR -54 208 161 369 346 0 0 chr10 72934594 72935033 -67381732 + (TGG)n Simple_repeat Simple_repeat 1 439 0 366 284 79 95 chr10 72935037 72935568 -67381197 - L1MDa LINE L1 -1572 4968 1227 344 151 0 0 chr10 72936428 72936481 -67380284 + L1MA6 LINE L1 6248 6300 0 2405 64 0 0 chr10 72937308 72937605 -67379160 - AluY SINE Alu -14 297 1 258 291 88 96 chr10 72937769 72938020 -67378745 - L2 LINE L2 -91 3181 2933 306 306 117 60 chr10 72938674 72938922 -67377843 - L1ME LINE L1 -583 5581 5320 225 232 87 0 chr10 72940184 72940253 -67376512 - L1ME LINE L1 -373 5791 5717 180 0 0 0 chr10 72940349 72940369 -67376396 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1382 162 0 0 chr10 72940375 72940579 -67376186 - AluJb SINE Alu -23 289 86 228 306 28 28 chr10 72940618 72940762 -67376003 - L1ME LINE L1 -635 5531 5388 414 222 8 51 chr10 72941181 72941298 -67375467 + MIR SINE MIR 36 147 -115 4556 233 53 37 chr10 72941664 72943082 -67373683 - L1M4 LINE L1 -5094 1448 9 267 349 73 48 chr10 72943322 72943720 -67373045 - L1ME LINE L1 -1826 4320 3913 482 176 22 12 chr10 72944446 72944559 -67372206 + MLT1F1 LTR MaLR 458 552 -15 646 259 27 36 chr10 72944741 72944961 -67371804 - MIR SINE MIR -24 238 21 634 198 141 35 chr10 72945694 72945921 -67370844 - L1ME3 LINE L1 0 6162 5912 265 238 220 77 chr10 72946006 72946174 -67370591 - MIR SINE MIR -10 252 61 520 273 19 49 chr10 72947109 72947314 -67369451 - MIR SINE MIR -57 205 7 401 236 65 24 chr10 72948860 72948983 -67367782 + MIR SINE MIR 77 204 -58 379 263 50 10 chr10 72949145 72949244 -67367521 - MIR SINE MIR 0 262 160 540 226 39 45 chr10 72949246 72949401 -67367364 + MLT1H1 LTR MaLR 3 156 -399 3978 194 59 19 chr10 72949403 72950285 -67366480 - MER49 LTR ERV1 0 923 7 480 255 120 43 chr10 72950409 72950617 -67366148 + MLT1H1 LTR MaLR 332 555 0 317 280 63 24 chr10 72950620 72950747 -67366018 - MIR SINE MIR -65 143 31 194 260 27 55 chr10 72952684 72952757 -67364008 - MER5A DNA MER1_type -114 75 5 1759 253 205 20 chr10 72952957 72953869 -67362896 + L2 LINE L2 2154 3241 -31 338 333 9 9 chr10 72954531 72954645 -67362120 + MIR SINE MIR 23 136 -126 347 342 106 5 chr10 72954658 72954857 -67361908 - L1ME3A LINE L1 -20 6150 5932 740 227 115 10 chr10 72955042 72955319 -67361446 + L1MCc LINE L1 1357 1872 -4924 976 70 7 63 chr10 72955594 72955737 -67361028 - AluSq/x SINE Alu -173 139 5 1836 168 14 14 chr10 72955835 72956132 -67360633 - AluJo SINE Alu -15 297 1 3109 40 0 3 chr10 72956603 72956976 -67359789 - L1PA5 LINE L1 0 6154 5783 199 147 0 0 chr10 72956985 72957019 -67359746 - L2 LINE L2 -19 3294 3261 1167 193 14 5 chr10 72957698 72957911 -67358854 - MER58A DNA MER1_type 0 224 10 803 257 92 5 chr10 72958719 72958933 -67357832 - MIR SINE MIR -23 239 14 1447 231 32 34 chr10 72959363 72960041 -67356724 + L1ME LINE L1 4928 5606 -560 621 184 52 7 chr10 72960126 72960262 -67356503 - MER69 DNA AcHobo -3 2523 2382 744 233 17 68 chr10 72960806 72961078 -67355687 + MIR SINE MIR 2 255 -7 712 314 160 6 chr10 72962497 72962983 -67353782 - L2 LINE L2 -301 3012 2451 385 330 116 5 chr10 72964334 72964558 -67352207 - MER112 DNA MER1_type -11 249 1 238 143 0 0 chr10 72965254 72965289 -67351476 - L2 LINE L2 -17 3296 3262 1145 198 75 39 chr10 72965728 72966087 -67350678 - MLT1C LTR MaLR -1 466 95 2824 7 0 0 chr10 72967010 72967309 -67349456 - AluYa5 SINE Alu -12 299 1 29 70 0 0 chr10 72967565 72967622 -67349143 + AT_rich Low_complexity Low_complexity 1 57 0 301 340 39 32 chr10 72967665 72967821 -67348944 - MIR SINE MIR -90 172 16 265 323 0 0 chr10 72968470 72968535 -67348230 + Charlie8 DNA MER1_type 14 78 -2339 2397 76 3 0 chr10 72968623 72968914 -67347851 + AluSx SINE Alu 1 292 -20 206 200 22 22 chr10 72969623 72969668 -67347097 - L2 LINE L2 -556 2758 2714 2209 109 13 16 chr10 72969865 72970168 -67346597 - AluSx SINE Alu -10 302 1 612 208 39 73 chr10 72970628 72970806 -67345959 + MIR SINE MIR 32 203 -59 299 271 127 38 chr10 72970854 72971145 -67345620 - L2 LINE L2 -17 3255 2939 249 241 172 0 chr10 72972035 72972122 -67344643 - L2 LINE L2 -2 3311 3210 586 239 19 49 chr10 72972525 72972690 -67344075 + MIR SINE MIR 23 187 -58 499 181 14 101 chr10 72973461 72973599 -67343166 - MIR SINE MIR -42 220 95 274 294 55 9 chr10 72974197 72974306 -67342459 + MIR SINE MIR 23 136 -72 620 227 15 81 chr10 72974403 72974601 -67342164 - MIR SINE MIR -22 240 56 2129 119 34 7 chr10 72974807 72975101 -67341664 - AluSx SINE Alu -10 302 1 558 227 37 156 chr10 72975110 72975541 -67341224 - L1MC4 LINE L1 -142 7900 7521 350 252 19 49 chr10 72975923 72976169 -67340596 + G-rich Low_complexity Low_complexity 1 238 0 360 212 11 13 chr10 72976478 72976568 -67340197 + MER2 DNA MER2_type 1 89 -150 2217 82 62 3 chr10 72976630 72976921 -67339844 + AluSg SINE Alu 1 308 -2 1861 147 25 3 chr10 72977058 72977343 -67339422 + AluJb SINE Alu 1 291 -21 354 267 37 81 chr10 72977940 72978163 -67338602 + MIR SINE MIR 4 211 -51 2071 80 87 21 chr10 72978831 72979150 -67337615 + AluY SINE Alu 1 311 0 1617 132 47 0 chr10 72979186 72979421 -67337344 + AluJb SINE Alu 10 255 -57 877 160 18 30 chr10 72982480 72982649 -67334116 + AluJb SINE Alu 133 299 -13 262 315 46 23 chr10 72982663 72982793 -67333972 + L3 LINE CR1 1426 1558 -19 2362 95 0 3 chr10 72983118 72983414 -67333351 - AluSg SINE Alu -15 295 1 1966 143 13 3 chr10 72983449 72983749 -67333016 + AluSx SINE Alu 1 303 -9 218 162 0 0 chr10 72985408 72985445 -67331320 + MIR SINE MIR 161 197 -65 865 158 0 0 chr10 72985465 72985598 -67331167 + AluJb SINE Alu 1 133 -179 2242 125 0 0 chr10 72985600 72985897 -67330868 + AluSx SINE Alu 1 297 -15 1613 154 137 44 chr10 72985959 72986434 -67330331 + Charlie1b DNA MER1_type 1 519 -4 211 275 88 12 chr10 72986850 72986930 -67329835 - L2 LINE L2 -7 3265 3180 234 93 259 0 chr10 72987530 72987584 -67329181 + L1MC/D LINE L1 5743 5810 -1998 1431 197 0 3 chr10 72987591 72987875 -67328890 + L1MD3 LINE L1 7705 7987 -8 600 288 136 8 chr10 72987937 72988260 -67328505 + L1ME3A LINE L1 5416 5791 -371 2202 123 0 0 chr10 72988260 72988553 -67328212 + AluSx SINE Alu 1 293 -19 600 288 136 8 chr10 72988553 72988590 -67328175 + L1ME3A LINE L1 5791 5822 -340 343 61 20 0 chr10 72988612 72988661 -67328104 - U7 snRNA snRNA -1 62 13 1456 179 41 47 chr10 72988734 72989074 -67327691 + MER44D DNA MER2_type 1 608 -1 433 214 84 38 chr10 72989981 72990112 -67326653 - MIR SINE MIR -48 214 78 2285 115 0 22 chr10 72990319 72990633 -67326132 + AluSx SINE Alu 1 307 -5 1151 53 8 0 chr10 72991049 72991181 -67325584 + AluSx SINE Alu 1 133 -180 985 127 7 7 chr10 72991282 72991432 -67325333 + AluSx SINE Alu 141 290 -22 281 231 13 0 chr10 72991445 72991523 -67325242 + LTR9 LTR ERV1 444 522 -90 241 223 180 69 chr10 72991979 72992212 -67324553 + L1ME3A LINE L1 5911 6169 -1 293 281 133 22 chr10 72992236 72992371 -67324394 + MIR3 SINE MIR 20 169 -39 985 133 6 61 chr10 72993303 72993519 -67323246 + AluSp SINE Alu 117 322 0 922 130 0 0 chr10 72993551 72993682 -67323083 - FLAM_C SINE Alu 0 133 3 5570 70 9 17 chr10 72993767 72994539 -67322226 + MER4E LTR ERV1 1 766 0 208 287 0 53 chr10 72995265 72995359 -67321406 + G-rich Low_complexity Low_complexity 6 94 0 785 105 105 49 chr10 72995437 72995580 -67321185 + AluJb SINE Alu 2 152 -160 2131 124 0 19 chr10 72995703 72996010 -67320755 + AluSg SINE Alu 1 301 -9 798 96 32 70 chr10 72996038 72996194 -67320571 - MER39 LTR ERV1 -11 696 547 321 298 39 0 chr10 72996329 72996433 -67320332 - MIR SINE MIR -68 140 33 2661 30 7 0 chr10 72996798 72997099 -67319666 + AluY SINE Alu 1 303 -8 2037 125 3 11 chr10 72997298 72997626 -67319139 - AluSx SINE Alu 0 330 5 21 0 0 0 chr10 72997630 72997651 -67319114 + AT_rich Low_complexity Low_complexity 1 21 0 307 354 34 17 chr10 72997904 72998079 -67318686 + L1ME LINE L1 5591 5768 -353 2312 103 6 13 chr10 72998295 72998606 -67318159 + AluSx SINE Alu 4 312 0 1662 170 28 10 chr10 72999041 72999330 -67317435 + AluJb SINE Alu 1 294 -18 584 243 59 72 chr10 72999815 73000037 -67316728 + MLT1J LTR MaLR 1 219 -292 28 0 0 0 chr10 73000237 73000265 -67316500 + AT_rich Low_complexity Low_complexity 1 28 0 2148 105 3 0 chr10 73000265 73000551 -67316214 - AluSx SINE Alu -2 310 24 658 206 115 0 chr10 73000629 73000794 -67315971 + MLT1J LTR MaLR 235 418 -93 2092 152 0 0 chr10 73001225 73001535 -67315230 - AluSx SINE Alu -2 310 1 2285 128 0 0 chr10 73001538 73001842 -67314923 - AluSx SINE Alu -8 304 1 466 285 142 15 chr10 73002380 73002710 -67314055 - LTR16A LTR ERVL 0 450 79 467 261 92 13 chr10 73052791 73052944 -67263821 + MER5B DNA MER1_type 14 178 0 291 304 173 18 chr10 73052954 73053012 -67263753 - MIR SINE MIR -34 228 180 2010 201 44 42 chr10 73053012 73053449 -67263316 + MLT1D LTR MaLR 1 441 -64 1713 159 20 3 chr10 73053449 73053744 -67263021 + AluJb SINE Alu 1 300 -12 2010 201 44 42 chr10 73053744 73053809 -67262956 + MLT1D LTR MaLR 441 504 -1 291 304 173 18 chr10 73053809 73053918 -67262847 - MIR SINE MIR -82 180 35 216 220 17 17 chr10 73053958 73054017 -67262748 + MIR SINE MIR 34 92 -116 2021 131 0 0 chr10 73054438 73054729 -67262036 - AluSx SINE Alu -21 291 1 2184 102 88 23 chr10 73054793 73054998 -67261767 + MER51B LTR ERV1 1 240 -137 2221 109 0 0 chr10 73054998 73055301 -67261464 - AluSx SINE Alu -9 303 1 2184 102 88 23 chr10 73055301 73055449 -67261316 + MER51B LTR ERV1 240 377 0 403 289 155 36 chr10 73055567 73055761 -67261004 + MIR SINE MIR 8 224 -38 310 239 80 0 chr10 73055791 73055879 -67260886 + L2 LINE L2 3160 3254 -18 1824 186 99 6 chr10 73056649 73057055 -67259710 - L1MD2 LINE L1 0 6359 5802 703 222 66 24 chr10 73057221 73057388 -67259377 + MER5B DNA MER1_type 2 175 -3 290 308 11 0 chr10 73057928 73058019 -67258746 - MIR SINE MIR -142 120 29 2082 120 7 7 chr10 73058415 73058723 -67258042 + AluSq SINE Alu 6 313 0 602 294 0 35 chr10 73059257 73059299 -67257466 - MER117 DNA MER1_type -1 196 154 2651 136 54 0 chr10 73059299 73059705 -67257060 + MSTA LTR MaLR 1 428 0 602 294 0 35 chr10 73059705 73059859 -67256906 - MER117 DNA MER1_type -43 154 7 2127 129 3 0 chr10 73059859 73060169 -67256596 + AluSx SINE Alu 1 311 -1 1289 180 4 21 chr10 73060202 73060441 -67256324 + AluJb SINE Alu 64 298 -14 443 263 67 83 chr10 73060808 73061120 -67255645 - L1MC4a LINE L1 -1892 5916 5610 1713 211 14 19 chr10 73061128 73061342 -67255423 - MLT1A1 LTR MaLR -6 359 146 2199 104 3 0 chr10 73061342 73061641 -67255124 - AluSp SINE Alu -13 300 1 1713 211 14 19 chr10 73061641 73061786 -67254979 - MLT1A1 LTR MaLR -219 146 2 541 256 173 31 chr10 73061861 73062196 -67254569 - MLT1J1 LTR MaLR 0 450 66 13549 107 40 67 chr10 73062507 73062629 -67254136 - Tigger1 DNA MER2_type 0 2418 2294 2191 81 0 7 chr10 73062629 73062925 -67253840 + AluSq SINE Alu 1 294 -19 13549 107 40 67 chr10 73062925 73063152 -67253613 - Tigger1 DNA MER2_type -124 2294 2062 1601 172 23 16 chr10 73063152 73063460 -67253305 - AluJo SINE Alu -2 310 1 13549 107 40 67 chr10 73063460 73063634 -67253131 - Tigger1 DNA MER2_type -356 2062 1885 2276 95 0 3 chr10 73063634 73063938 -67252827 - AluSq SINE Alu -8 305 3 13549 107 40 67 chr10 73063938 73063961 -67252804 - Tigger1 DNA MER2_type -533 1885 1863 1394 119 46 9 chr10 73063961 73064180 -67252585 - MER30 DNA MER1_type 0 230 4 13549 107 40 67 chr10 73064180 73064663 -67252102 - Tigger1 DNA MER2_type -555 1863 1368 1766 120 10 57 chr10 73064663 73064796 -67251969 + AluJo SINE Alu 11 149 -163 2263 94 3 0 chr10 73064796 73065094 -67251671 + AluSx SINE Alu 1 299 -13 1766 120 10 57 chr10 73065094 73065260 -67251505 + AluJo SINE Alu 149 296 -16 13549 107 40 67 chr10 73065260 73066121 -67250644 - Tigger1 DNA MER2_type -1050 1368 605 2214 100 13 0 chr10 73066121 73066422 -67250343 + AluSq SINE Alu 1 305 -8 13549 107 40 67 chr10 73066422 73066998 -67249767 - Tigger1 DNA MER2_type -1813 605 15 269 282 12 12 chr10 73067186 73067271 -67249494 - MIR SINE MIR -94 168 84 231 88 0 0 chr10 73067365 73067399 -67249366 + (TC)n Simple_repeat Simple_repeat 2 35 0 225 108 0 0 chr10 73067416 73067453 -67249312 + (TG)n Simple_repeat Simple_repeat 1 37 0 331 178 178 0 chr10 73067707 73067780 -67248985 - L2 LINE L2 0 3272 3187 527 118 13 0 chr10 73067877 73067992 -67248773 - FLAM_C SINE Alu 0 158 43 1692 189 31 11 chr10 73068013 73068362 -67248403 - L1MB3 LINE L1 -1 6182 5827 282 318 54 0 chr10 73068404 73068533 -67248232 + L2 LINE L2 2560 2695 -619 1020 165 0 78 chr10 73068622 73068661 -67248104 + AluJb SINE Alu 84 124 -188 1975 85 78 21 chr10 73068661 73068944 -67247821 - AluSg SINE Alu -11 299 1 1020 165 0 78 chr10 73068944 73069134 -67247631 + AluJb SINE Alu 124 295 -17 252 59 0 0 chr10 73071194 73071228 -67245537 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 639 273 167 21 chr10 73071229 73071559 -67245206 - L2 LINE L2 -14 3299 2922 2136 116 10 10 chr10 73072438 73072749 -67244016 - AluSq SINE Alu -2 311 1 355 258 107 3 chr10 73073437 73073612 -67243153 - MIR SINE MIR -50 212 16 561 209 108 20 chr10 73074028 73074176 -67242589 + MIR SINE MIR 88 248 -14 421 348 7 7 chr10 73074191 73074329 -67242436 + L2 LINE L2 3172 3309 -4 2242 97 0 3 chr10 73074397 73074696 -67242069 + AluSx SINE Alu 2 299 -13 725 146 18 0 chr10 73074752 73074862 -67241903 + FLAM_A SINE Alu 1 112 -30 1938 110 29 0 chr10 73074893 73075165 -67241600 + AluSx SINE Alu 22 301 -11 790 218 86 0 chr10 73075768 73075826 -67240939 + MER20 DNA MER1_type 31 83 -136 1779 157 20 3 chr10 73075826 73076119 -67240646 + AluJo SINE Alu 1 298 -14 790 218 86 0 chr10 73076119 73076234 -67240531 + MER20 DNA MER1_type 83 219 0 318 26 0 0 chr10 73076262 73076301 -67240464 + (TG)n Simple_repeat Simple_repeat 2 40 0 756 280 58 12 chr10 73077129 73077372 -67239393 + MIR SINE MIR 9 262 0 269 252 52 61 chr10 73077483 73077598 -67239167 - MER91C DNA MER1_type 0 140 27 612 241 115 7 chr10 73077779 73078057 -67238708 + LTR16C LTR ERVL 75 491 0 203 204 0 23 chr10 73080061 73080105 -67236660 + (CATA)n Simple_repeat Simple_repeat 2 44 0 201 233 14 27 chr10 73080766 73080839 -67235926 + T-rich Low_complexity Low_complexity 6 77 0 771 120 0 0 chr10 73083346 73083454 -67233311 + FLAM_C SINE Alu 2 109 -34 25 0 0 0 chr10 73084592 73084617 -67232148 + AT_rich Low_complexity Low_complexity 1 25 0 507 287 37 24 chr10 73084796 73084960 -67231805 + MIR3 SINE MIR 15 180 -28 1516 177 53 7 chr10 73086210 73086492 -67230273 - AluJb SINE Alu -17 295 1 330 188 30 38 chr10 73087125 73087197 -67229568 + GA-rich Low_complexity Low_complexity 3 75 -59 882 159 0 0 chr10 73087197 73087329 -67229436 + FLAM_C SINE Alu 1 132 -1 330 188 30 38 chr10 73087329 73087389 -67229376 + GA-rich Low_complexity Low_complexity 75 134 0 1817 138 3 17 chr10 73087613 73087902 -67228863 + AluJb SINE Alu 7 291 -21 563 335 82 22 chr10 73088058 73088422 -67228343 - LTR16C LTR ERVL -101 390 5 907 57 32 0 chr10 73088788 73088912 -67227853 - AluY SINE Alu -18 293 166 192 204 23 0 chr10 73089565 73089609 -67227156 - MIR SINE MIR -119 143 99 1114 207 41 110 chr10 73089726 73089850 -67226915 + MLT1A1 LTR MaLR 1 132 -233 2242 94 7 0 chr10 73089850 73090149 -67226616 + AluSg SINE Alu 1 301 -9 1114 207 41 110 chr10 73090149 73090391 -67226374 + MLT1A1 LTR MaLR 132 341 -24 431 117 39 0 chr10 73090391 73090468 -67226297 + MADE1 DNA Mariner 1 80 0 1114 207 41 110 chr10 73090468 73090492 -67226273 + MLT1A1 LTR MaLR 341 365 0 185 308 220 11 chr10 73090530 73090621 -67226144 - L3 LINE CR1 -259 1318 1209 399 158 0 13 chr10 73090640 73090716 -67226049 + MIR SINE MIR 77 151 -111 1850 133 24 27 chr10 73091595 73091889 -67224876 - AluJb SINE Alu -19 293 1 997 227 88 4 chr10 73091940 73092178 -67224587 + MIR SINE MIR 4 261 -1 2941 143 60 2 chr10 73092246 73092716 -67224049 - LOR1a LTR ERV1 0 497 1 2022 106 0 7 chr10 73092732 73093046 -67223719 + AluSx SINE Alu 1 312 0 22 0 0 0 chr10 73093228 73093250 -67223515 + AT_rich Low_complexity Low_complexity 1 22 0 531 164 156 8 chr10 73093260 73093382 -67223383 + FLAM_C SINE Alu 2 141 -2 969 268 101 45 chr10 73093383 73093514 -67223251 + L1ME4a LINE L1 5490 5612 -509 2027 120 7 0 chr10 73093514 73093691 -67223074 - AluSx SINE Alu -11 301 120 279 0 0 0 chr10 73093691 73093722 -67223043 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2027 120 7 0 chr10 73093722 73093843 -67222922 - AluSx SINE Alu -192 120 1 969 268 101 45 chr10 73093843 73094196 -67222569 + L1ME4a LINE L1 5612 6001 -120 2247 51 0 55 chr10 73094196 73094508 -67222257 + AluY SINE Alu 1 295 -16 2449 51 0 26 chr10 73094642 73094955 -67221810 + AluY SINE Alu 1 305 -6 428 269 126 55 chr10 73095052 73095234 -67221531 + MIR SINE MIR 6 200 -62 180 176 0 0 chr10 73096159 73096193 -67220572 + (CA)n Simple_repeat Simple_repeat 2 35 0 751 196 21 32 chr10 73096915 73097104 -67219661 - MER5A DNA MER1_type 0 189 3 231 233 67 33 chr10 73097119 73097209 -67219556 - MER5B DNA MER1_type -74 104 12 1862 113 92 0 chr10 73098066 73098348 -67218417 + AluSg SINE Alu 1 308 -2 221 244 0 0 chr10 73098473 73098518 -67218247 + (TG)n Simple_repeat Simple_repeat 2 46 0 625 122 0 37 chr10 73098940 73099047 -67217718 - AluSg/x SINE Alu 0 310 208 1033 187 0 0 chr10 73099214 73099380 -67217385 + FRAM SINE Alu 1 166 0 1107 295 90 3 chr10 73099418 73099784 -67216981 + MLT1J LTR MaLR 110 507 -4 315 322 11 124 chr10 73099808 73099985 -67216780 - L1ME LINE L1 -354 5767 5611 2146 116 0 0 chr10 73099988 73100289 -67216476 + AluSx SINE Alu 1 301 -11 801 128 0 64 chr10 73100331 73100472 -67216293 - FLAM_C SINE Alu 0 143 12 390 116 0 0 chr10 73100855 73100924 -67215841 - L1MA7 LINE L1 0 6291 6223 452 294 10 71 chr10 73101014 73101086 -67215679 - MIR SINE MIR 0 262 187 2163 97 23 0 chr10 73101086 73101385 -67215380 + AluSx SINE Alu 1 306 -6 452 294 10 71 chr10 73101385 73101509 -67215256 - MIR SINE MIR -75 187 78 336 24 0 0 chr10 73101680 73101721 -67215044 + (TG)n Simple_repeat Simple_repeat 2 42 0 912 178 89 18 chr10 73101739 73101964 -67214801 - MER67A LTR ERV1 -196 347 107 1119 142 15 25 chr10 73102247 73102444 -67214321 - AluSg/x SINE Alu 0 312 118 308 265 117 117 chr10 73102639 73102821 -67213944 + MIR SINE MIR 14 198 -64 1719 176 0 0 chr10 73102821 73103111 -67213654 + AluJo SINE Alu 1 290 -22 308 265 117 117 chr10 73103111 73103177 -67213588 + MIR SINE MIR 197 262 0 3944 82 6 9 chr10 73103623 73104170 -67212595 + MER41A LTR ERV1 1 545 -9 1561 163 24 17 chr10 73104170 73104459 -67212306 + AluJo SINE Alu 22 312 0 461 289 58 6 chr10 73104780 73104953 -67211812 - MIR SINE MIR 0 262 81 966 209 6 0 chr10 73105615 73105792 -67210973 - MER45A DNA AcHobo 0 178 1 1701 152 7 24 chr10 73105872 73106168 -67210597 + AluSx SINE Alu 7 297 -15 329 306 131 25 chr10 73106227 73106426 -67210339 + MIR SINE MIR 38 257 -5 2287 106 0 0 chr10 73107287 73107599 -67209166 - AluSx SINE Alu 0 312 1 367 336 99 39 chr10 73107602 73107751 -67209014 + L1MC4a LINE L1 5698 5837 -1971 2258 67 0 3 chr10 73107751 73108061 -67208704 - AluY SINE Alu 0 309 1 367 336 99 39 chr10 73108061 73108243 -67208522 + L1MC4a LINE L1 5837 6050 -1758 1331 234 96 28 chr10 73108519 73108883 -67207882 - LTR40a LTR ERVL -1 518 130 * 2629 163 85 36 chr10 73108874 73109486 -67207279 + MER4A LTR ERV1 22 663 -1 523 168 131 0 chr10 73109486 73109592 -67207173 - LTR40a LTR ERVL -398 121 2 214 272 34 0 chr10 73109596 73109683 -67207082 - MIR SINE MIR -71 137 45 23 33 0 0 chr10 73110060 73110090 -67206675 + AT_rich Low_complexity Low_complexity 1 30 0 187 214 48 0 chr10 73110311 73110353 -67206412 + MIR SINE MIR 102 145 -117 333 295 54 26 chr10 73110725 73110921 -67205844 - MIR SINE MIR -55 207 8 199 340 105 39 chr10 73111633 73111703 -67205062 + L2 LINE L2 2946 3010 -262 3185 133 44 20 chr10 73111703 73111973 -67204792 - L1PB4 LINE L1 -9 6147 5885 2167 121 0 0 chr10 73111973 73112279 -67204486 + AluSx SINE Alu 1 306 -6 3185 133 44 20 chr10 73112279 73112548 -67204217 - L1PB4 LINE L1 -271 5885 5595 199 340 105 39 chr10 73112548 73112762 -67204003 + L2 LINE L2 3010 3249 -23 882 188 10 56 chr10 73112918 73113030 -67203735 + L1MC3 LINE L1 7251 7352 -433 1894 137 3 3 chr10 73113030 73113323 -67203442 + AluSx SINE Alu 5 297 -15 882 188 10 56 chr10 73113323 73113407 -67203358 + L1MC3 LINE L1 7352 7438 -347 516 215 37 0 chr10 73113407 73113514 -67203251 - MER45 DNA AcHobo -59 119 9 391 276 47 8 chr10 73114221 73114348 -67202417 + MIR3 SINE MIR 36 167 -41 559 300 53 0 chr10 73114527 73114697 -67202068 + MIR SINE MIR 14 192 -70 2248 109 3 0 chr10 73114965 73115276 -67201489 + AluSx SINE Alu 1 312 0 257 109 22 0 chr10 73115345 73115391 -67201374 + GA-rich Low_complexity Low_complexity 3 49 0 1011 144 19 0 chr10 73116161 73116321 -67200444 - FRAM SINE Alu -12 164 2 318 250 0 83 chr10 73116332 73116464 -67200301 + L1ME LINE L1 5706 5826 -295 1045 241 139 106 chr10 73117315 73117891 -67198874 - MLT1H1 LTR MaLR 0 555 1 518 267 46 46 chr10 73117960 73118155 -67198610 + Tigger8 DNA MER2_type 47 241 -425 2188 113 3 0 chr10 73118156 73118465 -67198300 + AluSx SINE Alu 1 310 -2 788 158 0 16 chr10 73118526 73118653 -67198112 + FLAM_C SINE Alu 2 126 -17 495 267 37 0 chr10 73118864 73118999 -67197766 + L1MC5 LINE L1 7726 7865 -96 2085 102 3 3 chr10 73119004 73119318 -67197447 - AluSx SINE Alu 0 314 1 465 280 31 42 chr10 73119751 73119944 -67196821 + Charlie8 DNA MER1_type 2 192 -2225 481 224 42 98 chr10 73119999 73120184 -67196581 + MLT1C LTR MaLR 1 183 -207 1941 163 0 3 chr10 73120184 73120497 -67196268 + AluJo SINE Alu 1 312 0 481 224 42 98 chr10 73120497 73120539 -67196226 + MLT1C LTR MaLR 183 226 -164 1129 244 25 4 chr10 73120570 73120844 -67195921 + MLT1C LTR MaLR 186 465 -2 287 217 236 0 chr10 73120866 73120972 -67195793 - L3 LINE CR1 -76 1501 1371 261 281 62 38 chr10 73121084 73121244 -67195521 - L2 LINE L2 -189 3083 2920 337 228 0 43 chr10 73121537 73121629 -67195136 + MLT1K LTR MaLR 124 211 -377 321 212 24 47 chr10 73121900 73121985 -67194780 + MLT1K LTR MaLR 506 588 0 1344 128 0 15 chr10 73122590 73122828 -67193937 - AluSg/x SINE Alu 0 318 84 1971 120 31 7 chr10 73123184 73123476 -67193289 - AluSx SINE Alu -13 299 1 906 137 8 0 chr10 73123478 73123609 -67193156 - FLAM_A SINE Alu -1 132 1 329 352 98 27 chr10 73123714 73123970 -67192795 - L2 LINE L2 -453 2861 2588 209 226 7 175 chr10 73124278 73124415 -67192350 + L2 LINE L2 3139 3252 -20 425 156 21 104 chr10 73125014 73125110 -67191655 + MER21B LTR ERV1 1 88 -775 3046 182 87 2 chr10 73125112 73125684 -67191081 + MER21B LTR ERV1 41 661 -202 1440 179 4 8 chr10 73125704 73125961 -67190804 - AluJb SINE Alu -17 295 40 652 189 99 57 chr10 73125973 73126185 -67190580 + MER21B LTR ERV1 642 862 -1 2213 106 0 13 chr10 73126213 73126525 -67190240 + AluSx SINE Alu 1 308 -4 222 37 0 0 chr10 73126798 73126825 -67189940 + (GA)n Simple_repeat Simple_repeat 1 27 0 227 79 26 0 chr10 73126875 73126913 -67189852 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 364 91 91 30 chr10 73126948 73127014 -67189751 - MIR3 SINE MIR -52 156 87 188 282 14 70 chr10 73127269 73127340 -67189425 + MIR SINE MIR 122 188 -74 1540 135 74 4 chr10 73127359 73127603 -67189162 + AluJo SINE Alu 13 273 -39 378 0 0 0 chr10 73127614 73127656 -67189109 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1775 120 82 17 chr10 73128861 73129152 -67187613 + AluSg SINE Alu 1 310 0 2103 94 7 10 chr10 73129163 73129460 -67187305 + AluSx SINE Alu 1 296 -16 448 182 0 0 chr10 73129594 73129671 -67187094 + L1MB4 LINE L1 6045 6121 -59 1339 171 93 0 chr10 73129680 73129949 -67186816 - AluJo SINE Alu -18 294 1 243 170 0 0 chr10 73133516 73133563 -67183202 + (CA)n Simple_repeat Simple_repeat 1 47 0 228 186 0 0 chr10 73133779 73133838 -67182927 + CT-rich Low_complexity Low_complexity 1 59 0 1811 141 93 51 chr10 73135594 73135693 -67181072 + MER7A DNA MER2_type 1 94 -2944 2296 57 0 0 chr10 73135693 73136008 -67180757 - AluY SINE Alu 0 315 1 2214 92 0 29 chr10 73136008 73136314 -67180451 - AluSq SINE Alu -16 297 1 1811 141 93 51 chr10 73136314 73136546 -67180219 + MER7A DNA MER2_type 93 346 0 211 250 62 12 chr10 73136553 73136633 -67180132 + MIR SINE MIR 63 146 -62 322 356 45 0 chr10 73136801 73136975 -67179790 - MIR SINE MIR -52 210 30 356 234 72 0 chr10 73137194 73137305 -67179460 + MER69 DNA AcHobo 2 120 -2406 1371 201 11 11 chr10 73137309 73137592 -67179173 - AluJo SINE Alu -3 309 27 408 141 0 0 chr10 73137602 73137666 -67179099 + MER69 DNA AcHobo 2459 2522 -4 340 346 101 16 chr10 73138257 73138445 -67178320 - L3b LINE CR1 -55 1528 1325 216 250 0 0 chr10 73139558 73139610 -67177155 + C-rich Low_complexity Low_complexity 5 56 0 1918 135 42 0 chr10 73140447 73140736 -67176029 - AluJo SINE Alu -11 301 1 818 272 77 32 chr10 73141735 73142047 -67174718 + MER102a DNA MER1_type 3 328 -2 2320 108 3 10 chr10 73142153 73142467 -67174298 - AluSx SINE Alu 0 312 1 422 306 25 0 chr10 73142549 73142670 -67174095 - MIR3 SINE MIR -3 205 82 1496 198 128 6 chr10 73142694 73143047 -67173718 + MLT1F1 LTR MaLR 172 567 0 210 277 209 34 chr10 73144521 73144669 -67172096 - MIR3 SINE MIR -29 179 6 243 267 0 48 chr10 73145743 73145848 -67170917 + CT-rich Low_complexity Low_complexity 4 103 0 852 161 0 0 chr10 73147573 73147697 -67169068 - FLAM_C SINE Alu -19 124 1 196 351 22 30 chr10 73147748 73147882 -67168883 - MIR SINE MIR -74 188 56 194 308 96 48 chr10 73147960 73148064 -67168701 + MIR SINE MIR 17 125 -83 189 237 0 0 chr10 73148058 73148096 -67168669 + MER5B DNA MER1_type 9 46 -132 * 1922 156 0 29 chr10 73148097 73148404 -67168361 - AluJo SINE Alu -10 302 5 328 295 36 0 chr10 73149040 73149179 -67167586 + L1ME4a LINE L1 5978 6121 0 204 206 0 15 chr10 73149181 73149212 -67167553 + (TAA)n Simple_repeat Simple_repeat 3 33 -36 2442 72 13 0 chr10 73149212 73149517 -67167248 + AluY SINE Alu 1 309 -2 204 206 0 15 chr10 73149517 73149553 -67167212 + (TAA)n Simple_repeat Simple_repeat 33 69 0 925 287 24 8 chr10 73149957 73150211 -67166554 - MIR SINE MIR 0 262 5 225 286 133 0 chr10 73150814 73150912 -67165853 + MIR SINE MIR 36 146 -62 183 139 56 0 chr10 73152149 73152185 -67164580 + MIR SINE MIR 111 148 -60 262 260 27 120 chr10 73152913 73153063 -67163702 - L2 LINE L2 -14 3258 3123 1309 219 59 56 chr10 73153388 73153555 -67163210 + MLT1A2 LTR MaLR 2 167 -207 2227 128 0 0 chr10 73153555 73153859 -67162906 + AluJb SINE Alu 6 309 -3 1309 219 59 56 chr10 73153859 73154048 -67162717 + MLT1A2 LTR MaLR 167 359 -15 374 314 83 8 chr10 73154295 73154416 -67162349 - MIR3 SINE MIR -3 205 76 250 337 0 0 chr10 73155295 73155378 -67161387 - MIR SINE MIR -80 128 46 586 211 41 48 chr10 73155648 73155795 -67160970 + MIR SINE MIR 37 182 -80 268 279 0 15 chr10 73155872 73155940 -67160825 - L2 LINE L2 -8 3264 3198 314 151 247 0 chr10 73156887 73156960 -67159805 - MER91C DNA MER1_type -19 121 31 25 0 0 0 chr10 73158316 73158341 -67158424 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 73159597 73159618 -67157147 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 73160558 73160583 -67156182 + AT_rich Low_complexity Low_complexity 1 25 0 228 122 0 0 chr10 73161139 73161180 -67155585 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1677 179 23 10 chr10 73161592 73161900 -67154865 + AluJo SINE Alu 1 312 0 2355 103 0 10 chr10 73161902 73162212 -67154553 - AluSx SINE Alu -5 307 1 1984 99 26 7 chr10 73162416 73162688 -67154077 - AluSp SINE Alu -36 277 1 307 333 52 20 chr10 73162733 73162982 -67153783 + L1MC4a LINE L1 5665 5921 -1887 1151 173 101 10 chr10 73162999 73163306 -67153459 - Charlie1 DNA MER1_type -1 2760 2426 1871 166 18 52 chr10 73163322 73163708 -67153057 - MLT1B LTR MaLR -9 381 9 1688 185 26 15 chr10 73163708 73164049 -67152716 - Charlie1 DNA MER1_type -2416 345 1 310 239 186 60 chr10 73164050 73164074 -67152691 + MIR SINE MIR 75 95 -167 1735 157 29 36 chr10 73164074 73164380 -67152385 - AluJb SINE Alu -8 304 1 310 239 186 60 chr10 73164380 73164522 -67152243 + MIR SINE MIR 95 262 0 364 0 19 38 chr10 73164597 73164650 -67152115 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 421 213 0 0 chr10 73164650 73164730 -67152035 - FLAM SINE Alu -22 121 42 24 32 0 0 chr10 73165615 73165646 -67151119 + AT_rich Low_complexity Low_complexity 1 31 0 759 172 13 7 chr10 73165660 73165811 -67150954 - Charlie1 DNA MER1_type -2510 251 100 2168 125 0 19 chr10 73165902 73166215 -67150550 + AluJo SINE Alu 1 307 -5 2507 64 0 26 chr10 73166559 73166870 -67149895 + AluY SINE Alu 1 303 -8 206 256 11 33 chr10 73167131 73167221 -67149544 + GA-rich Low_complexity Low_complexity 3 90 0 2258 169 52 45 chr10 73167553 73168068 -67148697 + L1MB2 LINE L1 5652 6170 -1 632 210 89 25 chr10 73169345 73169502 -67147263 - FAM SINE Alu -8 167 1 2259 115 3 0 chr10 73170517 73170829 -67145936 + AluSp SINE Alu 1 313 0 21 0 0 0 chr10 73170865 73170886 -67145879 + AT_rich Low_complexity Low_complexity 1 21 0 2166 98 10 17 chr10 73171208 73171505 -67145260 - AluSx SINE Alu -17 295 1 904 133 0 15 chr10 73171536 73171671 -67145094 - FLAM_C SINE Alu 0 133 1 399 242 0 10 chr10 73172178 73172277 -67144488 + L1ME3A LINE L1 6065 6162 -8 1769 78 0 0 chr10 73172901 73173133 -67143632 + L1PA14 LINE L1 5930 6161 0 398 239 74 80 chr10 73173450 73173613 -67143152 - L1M4 LINE L1 -852 5294 5133 2336 107 3 0 chr10 73173671 73173971 -67142794 + AluSq SINE Alu 1 301 -12 403 247 119 23 chr10 73174024 73174108 -67142657 - MIR SINE MIR -1 261 186 2689 46 0 0 chr10 73174108 73174410 -67142355 - AluY SINE Alu -9 302 1 403 247 119 23 chr10 73174410 73174501 -67142264 - MIR SINE MIR -76 186 71 233 250 24 48 chr10 73174531 73174615 -67142150 + MER34 LTR ERV1 67 148 -394 1167 184 34 117 chr10 73174657 73175075 -67141690 + MER39 LTR ERV1 325 707 0 254 324 0 15 chr10 73175087 73175155 -67141610 - MIR SINE MIR -194 68 2 1557 206 40 58 chr10 73175905 73176467 -67140298 + LTR28 LTR ERV1 311 813 -13 3308 121 76 26 chr10 73178719 73179043 -67137722 + LTR24C LTR ERV1 1 307 -328 2300 128 0 0 chr10 73179043 73179355 -67137410 - AluJb SINE Alu 0 312 1 3308 121 76 26 chr10 73179355 73179635 -67137130 + LTR24C LTR ERV1 307 635 0 2456 79 0 0 chr10 73181485 73181777 -67134988 + AluSg SINE Alu 1 292 -18 1983 144 10 7 chr10 73182184 73182476 -67134289 + AluJb SINE Alu 1 293 -19 2481 55 0 3 chr10 73182627 73182920 -67133845 - AluY SINE Alu -19 292 1 2346 135 51 0 chr10 73183180 73183573 -67133192 + L1MB3 LINE L1 5771 6183 0 2133 119 13 0 chr10 73183578 73183880 -67132885 + AluSx SINE Alu 1 306 -6 2600 56 3 0 chr10 73185322 73185625 -67131140 + AluY SINE Alu 1 304 -7 801 199 73 29 chr10 73185890 73186096 -67130669 - MER58 DNA MER1_type -2205 215 1 252 263 0 0 chr10 73186224 73186281 -67130484 - L2 LINE L2 -9 3263 3207 262 326 95 23 chr10 73186507 73186771 -67129994 - L2 LINE L2 -1239 2075 1793 312 268 14 0 chr10 73187130 73187201 -67129564 - L1MC4 LINE L1 0 8042 7971 625 250 92 31 chr10 73187411 73187785 -67128980 - L1MEd LINE L1 -4970 1149 829 803 168 8 0 chr10 73187790 73187909 -67128856 + FLAM_C SINE Alu 1 120 -23 1159 144 17 0 chr10 73187916 73188090 -67128675 - AluSg/x SINE Alu -17 293 117 269 318 34 34 chr10 73188208 73188387 -67128378 - L1MEd LINE L1 -5379 740 562 2468 88 0 0 chr10 73189064 73189371 -67127394 + AluY SINE Alu 1 307 -4 2406 106 3 0 chr10 73189476 73189787 -67126978 + AluSq SINE Alu 1 312 -1 7303 130 74 75 chr10 73189853 73190933 -67125832 + L1MCa LINE L1 18 1095 -5331 2077 113 30 20 chr10 73190933 73191263 -67125502 + AluSx SINE Alu 1 312 0 7303 130 74 75 chr10 73191263 73191837 -67124928 + L1MCa LINE L1 1095 1669 -4757 2274 200 11 82 chr10 73191829 73192118 -67124647 + L1MCa LINE L1 2244 2552 -3874 * 1992 161 0 3 chr10 73192118 73192423 -67124342 - AluJb SINE Alu -8 304 1 2274 200 11 82 chr10 73192423 73193117 -67123648 + L1MCa LINE L1 2552 3294 -3132 2154 124 0 3 chr10 73193117 73193415 -67123350 + AluSg SINE Alu 1 297 -13 2274 200 11 82 chr10 73193415 73193478 -67123287 + L1MCa LINE L1 3294 3360 -3066 1637 175 32 44 chr10 73193478 73193793 -67122972 + AluJo SINE Alu 1 311 -1 2274 200 11 82 chr10 73193793 73194034 -67122731 + L1MCa LINE L1 3360 3617 -2809 2389 70 0 7 chr10 73194034 73194334 -67122431 + AluY SINE Alu 1 298 -13 2274 200 11 82 chr10 73194334 73194378 -67122387 + L1MCa LINE L1 3612 3461 -2961 1086 167 38 0 chr10 73194378 73194588 -67122177 + L1MC1 LINE L1 6110 6327 -6 189 0 0 0 chr10 73195702 73195723 -67121042 + (T)n Simple_repeat Simple_repeat 1 21 0 358 336 84 0 chr10 73196799 73196930 -67119835 + L2 LINE L2 3116 3257 -15 401 263 53 45 chr10 73197167 73197300 -67119465 + MIR3 SINE MIR 54 187 -21 780 231 0 0 chr10 73198688 73198857 -67117908 + AluJb SINE Alu 137 305 -7 301 287 11 58 chr10 73199251 73199338 -67117427 + MIR3 SINE MIR 1 83 -125 368 281 70 9 chr10 73199394 73199508 -67117257 + MIR3 SINE MIR 57 177 -31 1620 166 15 96 chr10 73200264 73200368 -67116397 + L1MB8 LINE L1 5724 5835 -343 1866 164 13 29 chr10 73200368 73200498 -67116267 + AluJb SINE Alu 3 134 -178 2201 119 0 13 chr10 73200498 73200801 -67115964 + AluSq SINE Alu 1 299 -14 1866 164 13 29 chr10 73200801 73200981 -67115784 + AluJb SINE Alu 134 308 -4 1620 166 15 96 chr10 73200981 73201389 -67115376 + L1MB8 LINE L1 5835 6173 -5 804 200 42 0 chr10 73201659 73201849 -67114916 - MER3 DNA MER1_type 0 209 12 2272 97 0 7 chr10 73202117 73202417 -67114348 + AluSg SINE Alu 1 298 -12 342 0 0 0 chr10 73202418 73202456 -67114309 + (CA)n Simple_repeat Simple_repeat 2 39 0 184 323 0 16 chr10 73202514 73202576 -67114189 + MIR SINE MIR 87 147 -115 2285 92 30 0 chr10 73202852 73203147 -67113618 - AluSx SINE Alu -8 304 1 1029 167 71 29 chr10 73203452 73203662 -67113103 - MER20 DNA MER1_type 0 219 1 364 153 71 12 chr10 73203727 73203812 -67112953 + MER53 DNA DNA 93 182 -7 * 382 176 71 0 chr10 73203743 73203828 -67112937 - MER53 DNA DNA -98 91 1 412 334 93 61 chr10 73204222 73204685 -67112080 - L2 LINE L2 -8 3264 2778 620 224 137 0 chr10 73204814 73204975 -67111790 - MIR SINE MIR -27 235 53 1174 105 0 7 chr10 73204977 73205130 -67111635 + AluSq/x SINE Alu 1 152 -160 1853 157 10 26 chr10 73205130 73205443 -67111322 + AluJo SINE Alu 4 311 -1 894 270 192 5 chr10 73206173 73206772 -67109993 - L2 LINE L2 -50 3263 2541 1788 151 0 42 chr10 73206982 73207155 -67109610 - AluJo SINE Alu 0 312 162 6112 52 8 72 chr10 73207155 73208038 -67108727 + LTR12 LTR ERV1 1 826 0 1788 151 0 42 chr10 73208038 73208194 -67108571 - AluJo SINE Alu -150 162 1 2291 110 0 3 chr10 73208225 73208533 -67108232 + AluSg SINE Alu 1 307 -3 2129 139 0 3 chr10 73208833 73209143 -67107622 - AluSx SINE Alu -3 309 1 309 230 196 61 chr10 73209412 73209560 -67107205 - MIR3 SINE MIR -21 187 20 297 281 38 69 chr10 73209563 73209582 -67107183 + L2 LINE L2 3159 3177 -136 1684 96 153 0 chr10 73209582 73209843 -67106922 - AluSx SINE Alu 0 302 2 297 281 38 69 chr10 73209843 73209983 -67106782 + L2 LINE L2 3177 3313 0 2389 86 0 6 chr10 73210080 73210393 -67106372 - AluY SINE Alu 0 311 1 190 319 67 42 chr10 73210758 73210877 -67105888 - L2 LINE L2 0 3313 3192 196 288 17 17 chr10 73211894 73211953 -67104812 + MIR SINE MIR 23 81 -181 459 0 0 0 chr10 73212015 73212066 -67104699 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 234 184 0 0 chr10 73212066 73212115 -67104650 + (TA)n Simple_repeat Simple_repeat 1 49 0 442 336 25 25 chr10 73212281 73212596 -67104169 - L1ME4a LINE L1 -277 6238 5924 183 333 101 30 chr10 73212684 73212783 -67103982 + L2 LINE L2 3196 3301 -12 411 296 128 55 chr10 73212879 73213278 -67103487 - L1ME4a LINE L1 -1929 4611 4184 2201 113 0 0 chr10 73213344 73213645 -67103120 - AluSx SINE Alu -11 301 1 2224 109 3 3 chr10 73213858 73214161 -67102604 + AluY SINE Alu 1 303 -8 275 295 26 13 chr10 73214181 73214337 -67102428 - L1M4 LINE L1 -1707 4439 4282 665 182 18 0 chr10 73214345 73214476 -67102289 - FLAM_A SINE Alu 0 137 5 994 289 63 25 chr10 73214535 73214962 -67101803 - L1M4 LINE L1 -3348 2798 2336 1955 120 48 0 chr10 73214962 73215253 -67101512 - AluSg1 SINE Alu -4 305 1 994 289 63 25 chr10 73215253 73215478 -67101287 - L1M4 LINE L1 -3810 2336 2121 416 278 107 28 chr10 73215920 73216247 -67100518 - L1ME4a LINE L1 -4539 2001 1649 293 239 132 89 chr10 73216294 73216507 -67100258 + L2 LINE L2 2826 3047 -225 228 186 102 0 chr10 73216554 73216613 -67100152 + Charlie1 DNA MER1_type 1567 1631 -1130 610 289 13 7 chr10 73216708 73216857 -67099908 + L2 LINE L2 3123 3272 0 262 222 170 82 chr10 73216985 73217156 -67099609 + L2 LINE L2 2914 3099 -173 213 296 132 43 chr10 73217300 73217557 -67099208 - L2 LINE L2 -1700 1614 1335 210 327 69 30 chr10 73217930 73218031 -67098734 + L2 LINE L2 3163 3267 -5 2117 129 3 0 chr10 73218237 73218531 -67098234 - AluSx SINE Alu -17 295 1 21 36 0 0 chr10 73218531 73218559 -67098206 + AT_rich Low_complexity Low_complexity 1 28 0 534 291 98 5 chr10 73218615 73218818 -67097947 + MIR SINE MIR 41 262 0 5617 154 83 71 chr10 73218866 73220135 -67096630 + Charlie1a DNA MER1_type 1 1290 -1471 2554 65 0 0 chr10 73220135 73220443 -67096322 + AluY SINE Alu 1 308 -3 5617 154 83 71 chr10 73220443 73220609 -67096156 + Charlie1a DNA MER1_type 1290 1453 -2 2305 110 3 0 chr10 73220882 73221182 -67095583 + AluSq SINE Alu 1 301 -12 7339 38 7 1 chr10 73221625 73222581 -67094184 + L1PA6 LINE L1 5191 6149 -5 256 191 0 183 chr10 73222617 73222674 -67094091 - MIR SINE MIR -32 230 164 2169 89 3 10 chr10 73222674 73222967 -67093798 - AluSc SINE Alu -18 291 1 1729 125 0 113 chr10 73222971 73223308 -67093457 - AluJb SINE Alu -3 299 1 256 191 0 183 chr10 73223308 73223360 -67093405 - MIR SINE MIR -101 161 137 585 172 43 9 chr10 73223529 73223645 -67093120 + FLAM_A SINE Alu 1 120 -13 2373 78 7 3 chr10 73224395 73224704 -67092061 - AluY SINE Alu -1 310 1 2048 119 27 0 chr10 73224704 73224999 -67091766 - AluSq SINE Alu -10 303 1 281 237 21 11 chr10 73225016 73225109 -67091656 + L1MC4a LINE L1 5570 5663 -458 461 177 62 39 chr10 73225142 73225272 -67091493 + L1MC5 LINE L1 7096 7228 -733 228 282 0 12 chr10 73225350 73225435 -67091330 + L1MC4a LINE L1 7274 7357 -451 2050 158 0 0 chr10 73225472 73225770 -67090995 - AluSx SINE Alu -14 298 1 474 266 42 130 chr10 73225770 73226154 -67090611 + L1MC4a LINE L1 5682 6031 -1777 1190 195 22 7 chr10 73226272 73226544 -67090221 + L1ME2 LINE L1 5879 6154 -10 348 256 85 39 chr10 73226559 73226688 -67090077 + L1ME4a LINE L1 5984 6118 -3 308 359 0 26 chr10 73226809 73226926 -67089839 + L2 LINE L2 3200 3313 0 2311 140 46 24 chr10 73226990 73227403 -67089362 + MSTB LTR MaLR 5 426 0 2388 70 0 32 chr10 73227459 73227775 -67088990 + AluY SINE Alu 1 306 -5 716 131 0 0 chr10 73227978 73228085 -67088680 - FLAM_C SINE Alu -36 107 1 562 123 49 49 chr10 73228624 73228746 -67088019 + L1MB2 LINE L1 6048 6169 -2 2532 69 0 0 chr10 73230878 73231182 -67085583 - AluY SINE Alu -7 304 1 769 163 0 30 chr10 73231557 73231692 -67085073 + FLAM_C SINE Alu 1 131 -2 37 81 0 0 chr10 73231692 73231778 -67084987 + AT_rich Low_complexity Low_complexity 1 86 0 2438 73 0 0 chr10 73231780 73232081 -67084684 + AluY SINE Alu 1 301 -10 672 244 29 12 chr10 73232245 73232417 -67084348 + MLT1E2 LTR MaLR 1 175 -451 2906 156 76 38 chr10 73232708 73233137 -67083628 + L1MB5 LINE L1 4806 5217 -957 2303 87 3 13 chr10 73233137 73233449 -67083316 - AluY SINE Alu -2 309 1 936 164 13 13 chr10 73233452 73233611 -67083154 - FRAM SINE Alu -6 160 2 2906 156 76 38 chr10 73233611 73233639 -67083126 + L1MB5 LINE L1 5218 5243 -931 2285 114 0 0 chr10 73233639 73233936 -67082829 + AluSx SINE Alu 1 297 -15 2906 156 76 38 chr10 73233936 73234431 -67082334 + L1MB5 LINE L1 5243 5831 -343 2261 91 0 14 chr10 73234431 73234727 -67082038 + AluSx SINE Alu 1 292 -20 3744 178 39 50 chr10 73234773 73234943 -67081822 - L1MB5 LINE L1 -4 6170 6000 2005 145 3 0 chr10 73234943 73235240 -67081525 - AluSx SINE Alu -14 298 1 3744 178 39 50 chr10 73235240 73235992 -67080773 - L1MB5 LINE L1 -174 6000 5258 2309 84 3 7 chr10 73236095 73236394 -67080371 - AluSp SINE Alu -15 298 1 856 267 93 8 chr10 73236878 73237114 -67079651 - MIR SINE MIR -3 259 4 715 128 0 0 chr10 73237299 73237401 -67079364 + AluJ/FLAM SINE Alu 1 102 -210 3654 194 30 29 chr10 73237511 73238598 -67078167 + L1MB7 LINE L1 5088 6175 -9 1519 156 12 8 chr10 73238617 73238867 -67077898 - AluJo SINE Alu -12 300 50 2130 84 0 4 chr10 73238895 73239192 -67077573 + AluY SINE Alu 9 304 0 2465 200 125 52 chr10 73239192 73239547 -67077218 + L1MC4a LINE L1 5270 5598 -2210 1436 199 43 51 chr10 73239547 73239940 -67076825 + MLT1B LTR MaLR 1 390 0 2465 200 125 52 chr10 73239940 73240150 -67076615 + L1MC4a LINE L1 5598 5791 -2017 1747 137 50 14 chr10 73240150 73240427 -67076338 + AluJb SINE Alu 5 291 -21 2465 200 125 52 chr10 73240427 73240812 -67075953 + L1MC4a LINE L1 5791 6290 -1518 2315 100 0 0 chr10 73240816 73241116 -67075649 + AluSq SINE Alu 1 300 -13 681 269 138 7 chr10 73241116 73241413 -67075352 + L1MC4 LINE L1 7200 7535 -507 661 158 140 18 chr10 73241429 73241600 -67075165 + AluJo SINE Alu 119 310 -2 562 256 57 40 chr10 73241603 73241830 -67074935 + L1MC4 LINE L1 7580 7810 -232 637 181 48 0 chr10 73241837 73241942 -67074823 + FLAM_A SINE Alu 1 110 -32 413 251 155 0 chr10 73241953 73242140 -67074625 + L1MC4 LINE L1 7817 8032 -10 1468 182 266 10 chr10 73242141 73242403 -67074362 - MLT1D LTR MaLR 0 505 311 2129 106 34 0 chr10 73242403 73242695 -67074070 - AluSx SINE Alu -10 302 1 1468 182 266 10 chr10 73242695 73242834 -67073931 - MLT1D LTR MaLR -194 311 1 2281 104 0 3 chr10 73243112 73243420 -67073345 + AluSg SINE Alu 1 307 -3 830 165 0 0 chr10 73243491 73243624 -67073141 - FLAM_C SINE Alu 0 133 1 36 0 0 0 chr10 73243666 73243702 -67073063 + AT_rich Low_complexity Low_complexity 1 36 0 442 50 67 67 chr10 73243702 73243882 -67072883 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 262 89 98 0 chr10 73243869 73244000 -67072765 + (TA)n Simple_repeat Simple_repeat 1 143 0 * 26 0 0 0 chr10 73243984 73244010 -67072755 + AT_rich Low_complexity Low_complexity 1 26 0 * 572 254 39 0 chr10 73245707 73245837 -67070928 + MIR3 SINE MIR 36 170 -38 481 282 162 19 chr10 73246077 73246293 -67070472 + MIR SINE MIR 3 249 -13 450 261 42 14 chr10 73246984 73247126 -67069639 - MIR SINE MIR -1 261 116 1950 154 7 13 chr10 73247318 73247623 -67069142 - AluJb SINE Alu -9 303 1 254 324 123 66 chr10 73247714 73248122 -67068643 + L2 LINE L2 2842 3272 0 258 216 171 34 chr10 73249340 73249428 -67067337 + MLT1E2 LTR MaLR 109 208 -418 1291 159 7 76 chr10 73249479 73249769 -67066996 + MLT1E2 LTR MaLR 355 624 -2 2176 139 0 3 chr10 73250136 73250446 -67066319 - AluSx SINE Alu -3 309 1 318 230 196 61 chr10 73250715 73250863 -67065902 - MIR3 SINE MIR -21 187 20 301 261 85 72 chr10 73250870 73250882 -67065883 + L2 LINE L2 3159 3169 -144 1636 106 152 15 chr10 73250882 73251146 -67065619 - AluSx SINE Alu -1 301 2 301 261 85 72 chr10 73251146 73251286 -67065479 + L2 LINE L2 3169 3313 0 2276 96 0 34 chr10 73251383 73251705 -67065060 - AluY SINE Alu 0 311 1 2112 138 49 23 chr10 73251761 73252146 -67064619 - MSTB LTR MaLR 0 426 32 759 203 0 0 chr10 73252332 73252470 -67064295 + FLAM_C SINE Alu 2 139 -4 1020 76 62 0 chr10 73252774 73252918 -67063847 + L1PA11 LINE L1 6018 6170 -4 21 36 0 0 chr10 73253221 73253249 -67063516 + AT_rich Low_complexity Low_complexity 1 28 0 997 171 5 42 chr10 73254849 73255042 -67061723 - AluJo SINE Alu -126 186 1 2488 75 16 0 chr10 73255057 73255363 -67061402 - AluSp SINE Alu -2 311 1 731 148 26 0 chr10 73256961 73257076 -67059689 - AluJb SINE Alu -5 307 190 2075 113 3 34 chr10 73257290 73257608 -67059157 - AluSx SINE Alu 0 309 1 777 182 0 0 chr10 73259074 73259195 -67057570 + FLAM_A SINE Alu 3 123 -10 2140 126 3 3 chr10 73259202 73259495 -67057270 + AluSq SINE Alu 1 293 -20 716 133 9 0 chr10 73259691 73259796 -67056969 - AluJb SINE Alu -205 107 2 451 237 100 42 chr10 73259939 73260129 -67056636 + L1ME4a LINE L1 5919 6119 -2 1958 108 9 63 chr10 73260133 73260448 -67056317 + AluSp SINE Alu 1 298 -15 388 169 85 108 chr10 73260642 73260772 -67055993 - MER3 DNA MER1_type 0 209 83 1026 170 181 19 chr10 73260957 73261227 -67055538 - MSTB1 LTR MaLR -118 314 1 635 377 0 0 chr10 73261245 73261502 -67055263 - MIR SINE MIR 0 262 6 281 253 0 38 chr10 73261498 73261577 -67055188 + L2 LINE L2 3238 3313 0 * 249 288 88 16 chr10 73263146 73263271 -67053494 + MIR SINE MIR 64 197 -65 271 230 46 46 chr10 73263709 73263796 -67052969 + MER91B DNA MER1_type 53 139 -51 1721 95 33 4 chr10 73263906 73264148 -67052617 + AluSx SINE Alu 54 302 -10 503 340 37 19 chr10 73264188 73264650 -67052115 - L2 LINE L2 -847 2467 1932 1439 126 9 14 chr10 73264650 73264872 -67051893 - AluSq SINE Alu -82 231 11 205 212 61 15 chr10 73265455 73265521 -67051244 + GA-rich Low_complexity Low_complexity 6 74 0 2084 131 7 0 chr10 73265777 73266068 -67050697 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 73266068 73266092 -67050673 + AT_rich Low_complexity Low_complexity 1 24 0 1950 91 0 0 chr10 73267255 73267497 -67049268 - AluSg SINE Alu -56 254 13 482 193 28 0 chr10 73267555 73267570 -67049195 - MER3 DNA MER1_type 5 167 154 2514 45 0 3 chr10 73267570 73267860 -67048905 - AluY SINE Alu -22 289 1 482 193 28 0 chr10 73267860 73267953 -67048812 - MER3 DNA MER1_type -8 154 56 654 187 7 90 chr10 73268375 73268530 -67048235 + MIR SINE MIR 8 149 -113 832 148 0 42 chr10 73268651 73268793 -67047972 + AluJo SINE Alu 1 136 -176 282 29 0 0 chr10 73269154 73269189 -67047576 + (CA)n Simple_repeat Simple_repeat 2 36 0 2185 124 0 0 chr10 73269189 73269479 -67047286 - AluSx SINE Alu -22 290 1 1806 150 0 58 chr10 73269828 73270141 -67046624 + AluJo SINE Alu 1 295 -17 236 241 80 54 chr10 73270765 73270877 -67045888 - MIR SINE MIR -55 207 93 225 296 80 76 chr10 73271122 73271372 -67045393 - L2 LINE L2 -98 3174 2924 504 251 6 91 chr10 73271637 73271967 -67044798 + AluSx SINE Alu 1 302 0 1132 121 0 0 chr10 73272275 73272424 -67044341 - AluY SINE Alu -162 149 1 2343 103 3 0 chr10 73272424 73272724 -67044041 - AluSx SINE Alu -11 301 1 552 349 108 12 chr10 73272727 73273062 -67043703 - L2 LINE L2 -9 3263 2897 908 117 15 0 chr10 73273549 73273686 -67043079 - FRAM SINE Alu -12 164 26 504 307 36 36 chr10 73274333 73274525 -67042240 + MIR SINE MIR 48 239 -23 409 234 47 9 chr10 73274753 73274860 -67041905 - MIR SINE MIR -119 143 33 970 111 7 52 chr10 73275593 73275628 -67041137 - AluY SINE Alu -165 146 111 2410 70 3 3 chr10 73275628 73275928 -67040837 - AluY SINE Alu -11 300 1 970 111 7 52 chr10 73275928 73276045 -67040720 - AluY SINE Alu -200 111 1 2539 139 22 55 chr10 73276928 73277360 -67039405 + L1MD1 LINE L1 5755 6169 -73 1726 191 10 3 chr10 73277360 73277654 -67039111 - AluJo SINE Alu -14 298 3 2539 139 22 55 chr10 73277654 73277726 -67039039 + L1MD1 LINE L1 6169 6242 0 320 239 115 9 chr10 73277732 73277845 -67038920 + Charlie8 DNA MER1_type 107 231 -2186 5016 82 27 20 chr10 73278019 73278754 -67038011 + THE1B-int LTR MaLR 841 1580 0 1872 104 62 32 chr10 73278754 73279063 -67037702 + THE1B LTR MaLR 1 318 -46 7777 177 8 1 chr10 73279195 73280649 -67036116 - L1P LINE L1 -975 5171 3708 200 328 16 0 chr10 73280810 73280874 -67035891 + L2 LINE L2 3238 3302 -11 192 264 132 44 chr10 73280887 73280978 -67035787 + MIR SINE MIR 44 142 -66 339 25 0 0 chr10 73281407 73281447 -67035318 + (TG)n Simple_repeat Simple_repeat 2 41 0 1981 74 0 4 chr10 73281575 73281818 -67034947 - AluSc SINE Alu -2 307 66 354 289 15 30 chr10 73282596 73282731 -67034034 - AluSq/x SINE Alu -169 134 2 627 204 52 92 chr10 73282731 73283133 -67033632 + L1MC5 LINE L1 7542 7927 -34 341 301 9 9 chr10 73283756 73283869 -67032896 - MIR3 SINE MIR -50 158 46 534 218 27 0 chr10 73284618 73284728 -67032037 - MER81 DNA DNA -1 113 1 39 92 0 0 chr10 73285593 73285702 -67031063 + GC_rich Low_complexity Low_complexity 1 109 0 637 157 19 19 chr10 73286206 73286314 -67030451 + FLAM_A SINE Alu 21 128 -14 214 219 333 10 chr10 73286511 73286607 -67030158 - MER5A DNA MER1_type 0 189 63 1885 100 16 0 chr10 73287187 73287438 -67029327 - AluSp SINE Alu -58 255 1 371 313 73 26 chr10 73287665 73287857 -67028908 + MIR SINE MIR 5 205 -57 1602 153 75 18 chr10 73288602 73288883 -67027882 - AluJo SINE Alu -13 299 3 263 263 145 0 chr10 73288919 73288995 -67027770 - MIR SINE MIR -122 140 54 2113 105 0 85 chr10 73288995 73289337 -67027428 + AluSq SINE Alu 1 313 0 553 227 32 81 chr10 73290101 73290286 -67026479 + MER5B DNA MER1_type 1 176 -2 937 195 115 10 chr10 73290606 73290806 -67025959 + MER58A DNA MER1_type 1 221 -3 4140 174 61 41 chr10 73291338 73292317 -67024448 - pTR5 LTR ERV1 -670 1768 770 872 174 0 0 chr10 73292795 73292927 -67023838 - FLAM_C SINE Alu 0 133 2 352 349 72 75 chr10 73293115 73293531 -67023234 - L1M3c LINE L1 -5726 415 1 2260 263 44 40 chr10 73296809 73298105 -67018660 + L1M4c LINE L1 1295 2697 -3685 809 74 28 0 chr10 73298224 73298361 -67018404 + AluSg/x SINE Alu 175 314 0 1789 191 16 50 chr10 73298677 73299054 -67017711 + MLT1A1 LTR MaLR 2 365 0 1411 147 147 14 chr10 73299058 73299426 -67017339 + MLT1A1-int LTR MaLR 5 432 -946 192 77 0 0 chr10 73299426 73299452 -67017313 + (CTATT)n Simple_repeat Simple_repeat 5 30 0 215 313 43 43 chr10 73299469 73299584 -67017181 + MIR SINE MIR 23 137 -125 248 296 35 61 chr10 73302076 73302191 -67014574 + L2 LINE L2 3159 3270 -2 2175 96 14 10 chr10 73302381 73302674 -67014091 + AluSx SINE Alu 1 294 -18 2207 108 3 0 chr10 73302691 73302977 -67013788 + AluSx SINE Alu 1 287 -25 346 305 94 0 chr10 73302995 73303123 -67013642 - MER5A DNA MER1_type -49 140 1 835 219 0 0 chr10 73303126 73303277 -67013488 + FRAM SINE Alu 2 152 -24 1747 126 8 12 chr10 73303309 73303563 -67013202 + AluSc SINE Alu 1 253 -56 2186 99 0 7 chr10 73304344 73304637 -67012128 + AluSp SINE Alu 1 291 -22 216 300 75 25 chr10 73304859 73304939 -67011826 + MIR SINE MIR 31 114 -94 2113 134 0 0 chr10 73304979 73305271 -67011494 + AluSx SINE Alu 1 292 -20 2365 87 10 0 chr10 73305272 73305571 -67011194 + AluSx SINE Alu 1 302 -10 1397 153 48 12 chr10 73305618 73305866 -67010899 + AluJo SINE Alu 12 268 -44 1768 144 34 17 chr10 73307184 73307482 -67009283 - AluJo SINE Alu -9 303 1 2261 102 0 0 chr10 73307490 73307832 -67008933 - AluSq SINE Alu 0 342 1 1133 146 0 10 chr10 73307974 73308166 -67008599 - AluJb SINE Alu -3 309 120 241 123 96 27 chr10 73308166 73308239 -67008526 - AluY SINE Alu -12 289 212 2080 104 113 6 chr10 73310907 73311243 -67005522 + L1P5 LINE L1 5408 5779 -372 1450 142 0 103 chr10 73311244 73311575 -67005190 + AluJb SINE Alu 1 297 -15 1366 186 47 11 chr10 73311609 73311884 -67004881 + AluJb SINE Alu 3 287 -25 565 294 77 5 chr10 73312131 73312325 -67004440 - AluJb SINE Alu -9 303 96 313 275 114 8 chr10 73313554 73313685 -67003080 - L2 LINE L2 0 3313 3169 243 202 34 34 chr10 73313849 73313938 -67002827 - L1ME4a LINE L1 -21 6100 6012 817 243 0 0 chr10 73313938 73314119 -67002646 + LTR33 LTR ERVL 1 181 -340 1319 149 26 94 chr10 73314309 73314503 -67002262 - AluSx SINE Alu -25 287 120 243 0 0 0 chr10 73314503 73314530 -67002235 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1319 149 26 94 chr10 73314530 73314643 -67002122 - AluSx SINE Alu -192 120 1 526 229 9 0 chr10 73314847 73314952 -67001813 - MIR SINE MIR -109 153 48 191 61 30 0 chr10 73315049 73315082 -67001683 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 314 44 132 0 chr10 73315712 73315780 -67000985 + CT-rich Low_complexity Low_complexity 4 80 0 1055 110 52 64 chr10 73317544 73317652 -66999113 + AluSx SINE Alu 1 108 -204 2276 83 27 7 chr10 73317652 73317952 -66998813 + AluSg1 SINE Alu 2 307 -2 1055 110 52 64 chr10 73317952 73318016 -66998749 + AluSx SINE Alu 108 171 -141 23 0 0 0 chr10 73318467 73318490 -66998275 + AT_rich Low_complexity Low_complexity 1 23 0 2126 259 71 36 chr10 73318491 73319411 -66997354 + L1ME LINE L1 4176 5127 -1019 1133 243 58 11 chr10 73319422 73319847 -66996918 + L1ME LINE L1 5236 5680 -482 289 101 8 101 chr10 73320056 73320185 -66996580 + (TA)n Simple_repeat Simple_repeat 2 118 0 338 254 0 0 chr10 73320223 73320286 -66996479 + L2 LINE L2 3202 3264 -8 415 261 146 18 chr10 73320360 73320525 -66996240 + MER5A DNA MER1_type 1 186 -3 308 327 0 9 chr10 73320703 73320810 -66995955 + GA-rich Low_complexity Low_complexity 1 106 0 186 143 20 82 chr10 73321448 73321497 -66995268 - L2 LINE L2 0 3313 3268 312 315 126 14 chr10 73321838 73321981 -66994784 + MIR3 SINE MIR 23 181 -27 2076 117 7 7 chr10 73322027 73322318 -66994447 + AluSx SINE Alu 1 291 -21 1735 194 40 109 chr10 73322487 73323167 -66993598 + L1 LINE L1 2666 3298 -2848 1688 196 13 53 chr10 73323179 73323557 -66993208 - MLT1B LTR MaLR 0 390 28 1068 239 24 66 chr10 73323558 73323939 -66992826 + L1 LINE L1 3292 3656 -2490 2251 81 3 3 chr10 73324431 73324739 -66992026 - AluSp SINE Alu 0 308 1 1964 132 28 0 chr10 73326070 73326357 -66990408 + AluJb SINE Alu 1 295 -17 1385 166 117 15 chr10 73326713 73326978 -66989787 + AluJb SINE Alu 1 292 -20 315 106 0 0 chr10 73327021 73327068 -66989697 - Alu SINE Alu -9 291 245 201 39 0 0 chr10 73327768 73327794 -66988971 + (TTG)n Simple_repeat Simple_repeat 2 27 0 883 140 37 0 chr10 73327826 73327962 -66988803 - AluJb SINE Alu -171 141 1 610 258 66 49 chr10 73328188 73328432 -66988333 + MIR SINE MIR 12 259 -3 327 150 50 0 chr10 73328530 73328590 -66988175 + L1ME LINE L1 5698 5760 -406 2161 142 0 6 chr10 73328656 73328967 -66987798 + AluSx SINE Alu 1 309 -3 1194 154 0 11 chr10 73329007 73329195 -66987570 + AluSx SINE Alu 3 188 -124 572 256 116 10 chr10 73329738 73329945 -66986820 + L1M4 LINE L1 2683 2911 -3235 555 167 0 0 chr10 73330113 73330221 -66986544 - L1MB4 LINE L1 0 6180 6073 2873 166 29 53 chr10 73330221 73331009 -66985756 - L1MB4 LINE L1 -343 5831 5053 600 199 61 61 chr10 73331009 73331190 -66985575 - MLT1C LTR MaLR 0 467 287 1539 121 179 17 chr10 73331295 73331592 -66985173 - MSTA LTR MaLR -83 345 1 606 169 126 32 chr10 73331744 73331899 -66984866 - L1ME2 LINE L1 -169 5995 5815 521 259 19 12 chr10 73331907 73332069 -66984696 - L1ME LINE L1 -5902 168 6 21 36 0 0 chr10 73332089 73332117 -66984648 + AT_rich Low_complexity Low_complexity 1 28 0 284 305 73 29 chr10 73332452 73332724 -66984041 - L1M4 LINE L1 -3732 2912 2629 22 35 0 0 chr10 73332847 73332876 -66983889 + AT_rich Low_complexity Low_complexity 1 29 0 460 152 63 0 chr10 73332934 73333013 -66983752 + MSTB LTR MaLR 343 426 0 307 315 20 34 chr10 73333100 73333249 -66983516 - HAL1b LINE L1 -517 831 685 295 269 88 16 chr10 73333267 73333449 -66983316 - HAL1b LINE L1 -703 645 451 4898 240 65 28 chr10 73333624 73335031 -66981734 - L1M4 LINE L1 -5001 1541 83 1230 101 61 2 chr10 73335214 73335414 -66981351 + LTR12 LTR ERV1 513 714 0 1678 153 16 33 chr10 73335684 73335991 -66980774 - AluJb SINE Alu -10 302 1 26 64 0 0 chr10 73336615 73336662 -66980103 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr10 73336724 73336754 -66980011 + AT_rich Low_complexity Low_complexity 1 30 0 351 300 81 57 chr10 73337051 73337261 -66979504 - L2 LINE L2 -473 2841 2627 229 253 61 30 chr10 73337579 73337678 -66979087 - HAL1b LINE L1 -10 1338 1237 21 36 0 0 chr10 73339129 73339157 -66977608 + AT_rich Low_complexity Low_complexity 1 28 0 2459 272 52 30 chr10 73340922 73341746 -66975019 + L1M4 LINE L1 2931 3736 -2410 225 0 0 0 chr10 73341746 73341771 -66974994 + (TG)n Simple_repeat Simple_repeat 2 26 0 2459 272 52 30 chr10 73341771 73341841 -66974924 + L1M4 LINE L1 3736 3803 -2343 2345 85 0 0 chr10 73341841 73342147 -66974618 + AluY SINE Alu 1 306 -5 2459 272 52 30 chr10 73342147 73342413 -66974352 + L1M4 LINE L1 3803 4117 -2029 1786 79 0 0 chr10 73342413 73342641 -66974124 - AluY SINE Alu -18 293 66 286 236 142 17 chr10 73342802 73342918 -66973847 - MIR3 SINE MIR -38 170 41 230 198 0 74 chr10 73343320 73343401 -66973364 + CT-rich Low_complexity Low_complexity 2 76 0 180 238 48 32 chr10 73343974 73344037 -66972728 + L3b LINE CR1 1257 1320 -263 22 35 0 0 chr10 73344174 73344203 -66972562 + AT_rich Low_complexity Low_complexity 1 29 0 759 272 92 53 chr10 73344683 73345043 -66971722 - L2 LINE L2 0 3313 2940 739 215 8 0 chr10 73345692 73345822 -66970943 + FLAM_C SINE Alu 2 132 -11 457 16 32 0 chr10 73346258 73346320 -66970445 + (TA)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr10 73346320 73346349 -66970416 + AT_rich Low_complexity Low_complexity 1 29 0 734 83 83 9 chr10 73346363 73346471 -66970294 - L1PA10 LINE L1 -1 6167 6052 699 203 7 0 chr10 73346858 73346996 -66969769 - FLAM_C SINE Alu -4 139 1 419 92 0 0 chr10 73347751 73347816 -66968949 - MER116 DNA Mariner -1 79 15 345 317 118 27 chr10 73348578 73348799 -66967966 + MIR SINE MIR 21 261 -1 301 255 148 51 chr10 73348890 73349106 -66967659 - L1ME4a LINE L1 -16 6105 5869 2254 80 23 3 chr10 73350289 73350589 -66966176 - AluSx SINE Alu -6 306 1 23 33 0 0 chr10 73350690 73350720 -66966045 + AT_rich Low_complexity Low_complexity 1 30 0 675 297 163 68 chr10 73350876 73351256 -66965509 + L2 LINE L2 2857 3272 0 377 246 31 11 chr10 73351268 73351388 -66965377 - MIR SINE MIR -57 151 24 301 361 98 8 chr10 73351406 73351528 -66965237 - MIR SINE MIR -74 134 1 637 40 0 95 chr10 73351581 73351837 -66964928 + (TA)n Simple_repeat Simple_repeat 1 231 0 237 98 16 33 chr10 73351849 73351910 -66964855 + (TA)n Simple_repeat Simple_repeat 2 61 0 274 274 189 47 chr10 73353779 73353885 -66962880 + MIR SINE MIR 72 192 -70 616 310 80 14 chr10 73354068 73354429 -66962336 + L1ME LINE L1 5266 5650 -512 2528 40 7 3 chr10 73355871 73356172 -66960593 + AluY SINE Alu 1 302 -9 610 243 47 14 chr10 73356359 73356465 -66960300 - MIR SINE MIR -3 259 145 1302 158 30 21 chr10 73356465 73356699 -66960066 + MER46A DNA MER2_type 1 236 0 610 243 47 14 chr10 73356699 73356740 -66960025 - MIR SINE MIR -117 145 107 758 64 0 0 chr10 73356748 73356842 -66959923 + AluSp/q SINE Alu 208 301 -12 378 0 0 0 chr10 73356842 73356884 -66959881 + (TA)n Simple_repeat Simple_repeat 2 43 0 844 58 83 0 chr10 73356884 73357004 -66959761 + MER85 DNA T2_type 10 139 0 277 262 202 0 chr10 73357004 73357088 -66959677 - MIR SINE MIR -154 108 8 295 212 0 76 chr10 73357164 73357230 -66959535 + MIR3 SINE MIR 111 171 -37 230 200 12 153 chr10 73357253 73357338 -66959427 - L2 LINE L2 -1 3271 3199 729 170 38 6 chr10 73358241 73358400 -66958365 + Tigger4(Zombi) DNA MER2_type 2568 2731 0 2337 164 43 84 chr10 73358918 73359545 -66957220 + L1MA9 LINE L1 5409 6009 -303 314 262 29 19 chr10 73359709 73359812 -66956953 + L1M4 LINE L1 3081 3184 -2962 203 276 10 31 chr10 73359829 73359927 -66956838 + GA-rich Low_complexity Low_complexity 4 99 0 2091 70 3 30 chr10 73360165 73360465 -66956300 + AluSp SINE Alu 22 313 0 328 290 125 32 chr10 73360481 73360888 -66955877 - MLT1K LTR MaLR -7 581 137 1948 140 14 0 chr10 73361565 73361844 -66954921 - AluSq SINE Alu -15 298 16 802 217 53 24 chr10 73361949 73362176 -66954589 - MIR SINE MIR -24 238 8 364 242 46 41 chr10 73362649 73362684 -66954081 - L1M4 LINE L1 -3634 2512 2479 1748 191 43 3 chr10 73362684 73363035 -66953730 - MLT1A1 LTR MaLR 0 365 1 364 242 46 41 chr10 73363035 73363171 -66953594 - L1M4 LINE L1 -3667 2479 2337 2151 170 26 34 chr10 73363171 73363589 -66953176 - MER47B DNA MER2_type -2 416 2 364 242 46 41 chr10 73363589 73363635 -66953130 - L1M4 LINE L1 -3809 2337 2293 1250 186 0 0 chr10 73363645 73363865 -66952900 - ERVL LTR ERVL -1111 4653 4434 2830 167 8 21 chr10 73363890 73364405 -66952360 - MLT2B3 LTR ERVL -46 508 1 7001 154 30 11 chr10 73364405 73365720 -66951045 - ERVL-B3 LTR ERVL -7 5757 4419 678 263 20 61 chr10 73365842 73366089 -66950676 + MLT1F1 LTR MaLR 331 567 0 1793 158 7 0 chr10 73366274 73366547 -66950218 - 7SLRNA srpRNA srpRNA 0 320 46 1035 284 64 24 chr10 73366606 73367276 -66949489 + L1MEc LINE L1 586 1282 -5114 1841 129 0 35 chr10 73367296 73367614 -66949151 + AluSx SINE Alu 1 307 -5 2282 111 0 3 chr10 73368122 73368419 -66948346 - AluSx SINE Alu -16 296 1 30 59 0 0 chr10 73368428 73368479 -66948286 + AT_rich Low_complexity Low_complexity 1 51 0 361 247 52 33 chr10 73368679 73368859 -66947906 + MLT1L LTR MaLR 110 358 -257 232 258 210 16 chr10 73368893 73369017 -66947748 + MLT1L LTR MaLR 460 607 -8 319 274 49 0 chr10 73369021 73369123 -66947642 - MLT1K LTR MaLR -107 481 375 2002 127 13 25 chr10 73369514 73369653 -66947112 + AluSx SINE Alu 1 140 -172 2005 132 24 3 chr10 73369653 73369949 -66946816 + AluSx SINE Alu 1 302 -10 2002 127 13 25 chr10 73369949 73370125 -66946640 + AluSx SINE Alu 140 312 0 568 332 123 32 chr10 73370200 73370817 -66945948 - L2 LINE L2 -2 3270 2596 2384 98 3 0 chr10 73370845 73371151 -66945614 + AluSx SINE Alu 1 307 -5 210 152 0 87 chr10 73371411 73371457 -66945308 + MIR SINE MIR 88 129 -79 245 157 137 0 chr10 73371638 73371689 -66945076 + L2 LINE L2 3215 3272 0 403 227 9 55 chr10 73372186 73372296 -66944469 - MER45 DNA AcHobo -73 105 1 1169 124 10 40 chr10 73372352 73372553 -66944212 + MER2 DNA MER2_type 3 197 -148 25 90 0 0 chr10 73372557 73372624 -66944141 + AT_rich Low_complexity Low_complexity 1 67 0 2390 105 0 0 chr10 73373733 73374038 -66942727 + AluSq SINE Alu 1 305 -8 523 125 25 0 chr10 73374335 73374435 -66942330 - AluSp/q SINE Alu 0 307 206 330 311 8 16 chr10 73374670 73374792 -66941973 - L1M4 LINE L1 -1354 4792 4672 22 0 0 0 chr10 73374841 73374863 -66941902 + AT_rich Low_complexity Low_complexity 1 22 0 2692 215 40 61 chr10 73374868 73375939 -66940826 - L1ME1 LINE L1 -31 6135 5093 28 0 0 0 chr10 73375949 73375977 -66940788 + AT_rich Low_complexity Low_complexity 1 28 0 315 261 45 23 chr10 73376025 73376113 -66940652 - L1MC4 LINE L1 -1339 6703 6614 22 35 0 0 chr10 73376141 73376170 -66940595 + AT_rich Low_complexity Low_complexity 1 29 0 415 201 96 100 chr10 73376170 73376399 -66940366 - L1ME1 LINE L1 -1062 5084 4857 292 151 0 27 chr10 73376496 73376569 -66940196 + GA-rich Low_complexity Low_complexity 2 72 0 441 251 164 6 chr10 73377008 73377191 -66939574 + MER58A DNA MER1_type 12 223 -1 288 294 111 0 chr10 73377205 73377317 -66939448 - MIR SINE MIR -58 150 42 381 308 99 99 chr10 73378371 73378926 -66937839 + L1M2 LINE L1 505 1059 -5790 234 0 0 0 chr10 73379455 73379481 -66937284 + (T)n Simple_repeat Simple_repeat 1 26 0 402 287 160 6 chr10 73379785 73379966 -66936799 + MIR SINE MIR 20 228 -34 2005 138 3 10 chr10 73380253 73380550 -66936215 + AluSx SINE Alu 1 295 -17 557 131 10 0 chr10 73380551 73380650 -66936115 + MER41B-int LTR ERV1 2847 2946 -3000 12055 96 23 8 chr10 73380652 73382879 -66933886 + MER41B-int LTR ERV1 2879 5943 -3 3038 124 83 2 chr10 73382880 73383386 -66933379 + MER41B LTR ERV1 1 547 -88 249 155 52 0 chr10 73383386 73383444 -66933321 + L1M4 LINE L1 4942 5002 -1144 718 278 78 36 chr10 73383672 73384233 -66932532 + L1M4 LINE L1 4117 4701 -1445 1304 194 40 53 chr10 73384526 73384567 -66932198 - Charlie2 DNA MER1_type 0 2862 2822 2370 116 21 93 chr10 73384567 73384903 -66931862 - L1MA4A LINE L1 0 6303 5944 198 118 0 0 chr10 73384903 73384937 -66931828 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 2370 116 21 93 chr10 73384937 73384968 -66931797 - L1MA4A LINE L1 -359 5944 5912 1687 186 0 27 chr10 73384968 73385264 -66931501 - AluJb SINE Alu -24 288 1 2370 116 21 93 chr10 73385264 73385421 -66931344 - L1MA4A LINE L1 -391 5912 5816 1304 194 40 53 chr10 73385421 73385848 -66930917 - Charlie2 DNA MER1_type -40 2822 2400 250 243 29 0 chr10 73385843 73385913 -66930852 - Charlie2 DNA MER1_type -618 2244 2173 * 2037 113 7 3 chr10 73385940 73386224 -66930541 - AluSx SINE Alu -27 285 1 543 251 118 41 chr10 73386224 73386495 -66930270 - Charlie2 DNA MER1_type -2458 324 33 1508 219 87 7 chr10 73387811 73388236 -66928529 - MLT1C LTR MaLR 0 467 9 260 320 73 68 chr10 73389091 73389297 -66927468 - MIR3 SINE MIR -1 207 1 354 263 108 65 chr10 73389616 73389650 -66927115 + MIR SINE MIR 69 100 -162 2165 108 0 38 chr10 73389650 73389965 -66926800 - AluSc SINE Alu -6 303 1 354 263 108 65 chr10 73389965 73390116 -66926649 + MIR SINE MIR 100 262 0 212 200 146 0 chr10 73391512 73391567 -66925198 - MIR3 SINE MIR -133 75 13 361 318 0 9 chr10 73391606 73391713 -66925052 + L2 LINE L2 3160 3265 -7 21 0 0 0 chr10 73392811 73392832 -66923933 + AT_rich Low_complexity Low_complexity 1 21 0 1032 50 0 0 chr10 73394008 73394149 -66922616 + L1PA5 LINE L1 5919 6059 -95 336 253 100 53 chr10 73397720 73397870 -66918895 - L1MDa LINE L1 -5066 1474 1318 2111 91 4 4 chr10 73398521 73398797 -66917968 + AluSg SINE Alu 1 276 -34 476 318 66 16 chr10 73399620 73399878 -66916887 + MLT1I LTR MaLR 79 349 -60 397 298 73 23 chr10 73399976 73400177 -66916588 + MIR SINE MIR 23 232 -30 2313 65 13 16 chr10 73400707 73401017 -66915748 + AluY SINE Alu 1 309 -2 1951 110 0 24 chr10 73401474 73401764 -66915001 - AluSq SINE Alu 0 313 31 373 203 0 0 chr10 73401764 73401843 -66914922 + pTR5 LTR ERV1 743 821 -1617 3909 104 2 2 chr10 73402016 73402571 -66914194 - THE1-int LTR MaLR -769 811 257 641 65 149 28 chr10 73402573 73402680 -66914085 - THE1B LTR MaLR -244 120 1 792 289 62 4 chr10 73402680 73402936 -66913829 - MLT1F LTR MaLR -234 308 38 423 269 29 116 chr10 73402954 73403300 -66913465 - MLT1F-int LTR MaLR 0 1371 1056 386 319 40 36 chr10 73404006 73404282 -66912483 - MLT1F-int LTR MaLR -795 576 300 1471 248 66 43 chr10 73404455 73404972 -66911793 - MLT1F LTR MaLR -5 537 9 319 317 13 13 chr10 73405434 73405658 -66911107 + L1MEc LINE L1 1599 1822 -4574 397 265 23 34 chr10 73405889 73406153 -66910612 + L1MEc LINE L1 2155 2415 -3981 1880 140 12 39 chr10 73406159 73406495 -66910270 - ERVL LTR ERVL -580 5184 4858 * 2794 125 23 13 chr10 73406492 73406964 -66909801 + ERVL LTR ERVL 2363 2839 -2925 4239 246 74 38 chr10 73407095 73409509 -66907256 - L1M4c LINE L1 -4115 2531 4 628 348 60 61 chr10 73411010 73411750 -66905015 + L2 LINE L2 2236 2967 -305 1590 168 39 3 chr10 73411755 73412041 -66904724 + MER61D LTR ERV1 206 501 0 586 273 58 0 chr10 73412044 73412216 -66904549 - MLT1J LTR MaLR -312 199 18 1216 201 17 78 chr10 73412402 73412760 -66904005 - MLT1A2 LTR MaLR 0 374 39 658 221 77 5 chr10 73412763 73412958 -66903807 - L1ME LINE L1 -636 5526 5318 22 120 0 0 chr10 73412975 73413050 -66903715 + AT_rich Low_complexity Low_complexity 1 75 0 29 70 0 0 chr10 73413076 73413133 -66903632 + AT_rich Low_complexity Low_complexity 1 57 0 296 271 28 9 chr10 73413193 73413300 -66903465 + (TA)n Simple_repeat Simple_repeat 2 110 0 697 247 60 78 chr10 73413301 73413335 -66903430 - L1ME LINE L1 -877 5269 5236 3368 189 103 11 chr10 73413335 73414091 -66902674 + LTR1B LTR ERV1 1 826 0 697 247 60 78 chr10 73414091 73414212 -66902553 - L1ME LINE L1 -910 5236 5114 518 94 0 0 chr10 73414212 73414297 -66902468 - L1PA16 LINE L1 -5 6161 6077 697 247 60 78 chr10 73414297 73414654 -66902111 - L1ME LINE L1 -1032 5114 4765 752 103 8 24 chr10 73415004 73415130 -66901635 - AluSq/x SINE Alu -189 124 1 2750 109 108 20 chr10 73415134 73415705 -66901060 - MER41B-int LTR ERV1 -3258 3005 2212 778 157 50 0 chr10 73415721 73415861 -66900904 - MER41B-int LTR ERV1 -4915 2622 2476 * 2046 120 69 9 chr10 73415860 73416210 -66900555 - MER41B-int LTR ERV1 -4184 1762 1392 4308 144 13 0 chr10 73416211 73416892 -66899873 - MER41B-int LTR ERV1 -5256 690 1 820 71 0 0 chr10 73416897 73417010 -66899755 - MER41B LTR ERV1 -8 627 515 2040 113 0 0 chr10 73417049 73417323 -66899442 + AluSx SINE Alu 1 274 -38 915 198 113 60 chr10 73417440 73417758 -66899007 - MSTB1 LTR MaLR -1 431 97 189 0 0 0 chr10 73418054 73418075 -66898690 + (CA)n Simple_repeat Simple_repeat 2 22 0 1817 197 0 0 chr10 73418758 73419063 -66897702 + AluJb SINE Alu 1 305 -7 2394 131 17 0 chr10 73419280 73419638 -66897127 - THE1B LTR MaLR 0 364 1 646 212 159 0 chr10 73420308 73420478 -66896287 + MER105 DNA DNA 2 198 -6 206 371 0 0 chr10 73421354 73421424 -66895341 + MIR SINE MIR 116 185 -77 210 150 0 0 chr10 73421896 73421936 -66894829 + (CA)n Simple_repeat Simple_repeat 2 41 0 292 252 112 61 chr10 73421943 73422237 -66894528 - L1MC4 LINE L1 -124 7918 7610 1892 163 0 13 chr10 73422288 73422588 -66894177 + AluJo SINE Alu 1 296 -16 813 263 186 12 chr10 73422792 73423398 -66893367 - L1MC4 LINE L1 -476 7332 6572 275 231 44 0 chr10 73423496 73423587 -66893178 - L1MC4 LINE L1 -5 8037 7943 237 100 0 40 chr10 73423620 73423670 -66893095 - Alu SINE Alu -1 132 89 295 73 0 0 chr10 73423848 73423889 -66892876 - MADE1 DNA Mariner -39 41 1 274 159 0 0 chr10 73423889 73423928 -66892837 + MER45A DNA AcHobo 110 148 -30 24 32 0 0 chr10 73424877 73424908 -66891857 + AT_rich Low_complexity Low_complexity 1 31 0 312 198 75 75 chr10 73425548 73425654 -66891111 - MER5B DNA MER1_type -68 110 5 22 35 0 0 chr10 73426482 73426511 -66890254 + AT_rich Low_complexity Low_complexity 1 29 0 686 159 0 43 chr10 73426875 73427013 -66889752 - MER3 DNA MER1_type 0 209 78 424 249 121 66 chr10 73427263 73427697 -66889068 - MLT1H1 LTR MaLR -66 489 14 266 242 15 0 chr10 73428018 73428084 -66888681 - MER103 DNA DNA -43 123 57 204 216 0 0 chr10 73428323 73428360 -66888405 + (TG)n Simple_repeat Simple_repeat 2 38 0 2253 204 2 0 chr10 73429178 73429687 -66887078 + L1P LINE L1 2346 2855 -3291 469 263 108 9 chr10 73429869 73430066 -66886699 + MLT1L LTR MaLR 231 528 -87 495 223 91 0 chr10 73430430 73430551 -66886214 - MER94 DNA DNA -2 132 1 287 328 8 45 chr10 73430880 73431014 -66885751 - MIR SINE MIR -44 218 90 2173 82 3 13 chr10 73431171 73431486 -66885279 + THE1C LTR MaLR 1 312 -63 221 0 35 0 chr10 73431838 73431867 -66884898 + (CA)n Simple_repeat Simple_repeat 2 31 0 2239 98 10 0 chr10 73431938 73432243 -66884522 + AluY SINE Alu 1 308 -3 404 168 40 0 chr10 73432290 73432371 -66884394 + L1M4 LINE L1 5517 5606 -568 2411 101 0 13 chr10 73432371 73432687 -66884078 + AluSx SINE Alu 1 312 0 437 284 85 0 chr10 73432803 73432979 -66883786 - L1MC4a LINE L1 -1898 5910 5720 2403 97 0 10 chr10 73433277 73433587 -66883178 - AluSx SINE Alu -5 307 1 444 174 41 31 chr10 73433986 73434084 -66882681 - AluSg/x SINE Alu -20 290 192 325 189 25 16 chr10 73434155 73434277 -66882488 + CT-rich Low_complexity Low_complexity 2 124 0 1253 199 100 96 chr10 73434595 73435157 -66881608 + LTR49 LTR ERV1 2 565 -30 398 343 6 17 chr10 73435179 73435354 -66881411 - L2 LINE L2 -32 3281 3109 201 278 75 68 chr10 73435489 73435622 -66881143 + MIR3 SINE MIR 6 139 -69 237 250 0 0 chr10 73435860 73435912 -66880853 - Tigger5 DNA MER2_type -2268 55 4 2382 71 10 0 chr10 73436227 73436535 -66880230 + AluY SINE Alu 1 311 0 186 329 197 0 chr10 73437533 73437609 -66879156 + L2 LINE L2 3177 3267 -5 1043 220 104 52 chr10 73438176 73438522 -66878243 + MLT1A1 LTR MaLR 2 365 0 301 279 157 0 chr10 73438685 73438825 -66877940 - MLT1G LTR MaLR -76 479 318 1543 206 125 82 chr10 73438938 73439658 -66877107 - LTR1B LTR ERV1 -75 751 1 939 252 164 0 chr10 73439670 73439956 -66876809 - MLT1G LTR MaLR -248 342 10 284 236 0 0 chr10 73441486 73441558 -66875207 - LTR33 LTR ERVL -14 507 436 676 271 37 28 chr10 73441719 73441742 -66875023 - LTR33 LTR ERVL -294 227 206 1752 152 67 45 chr10 73441742 73442098 -66874667 + THE1B LTR MaLR 1 364 0 676 271 37 28 chr10 73442098 73442288 -66874477 - LTR33 LTR ERVL -315 206 12 21 36 0 0 chr10 73442318 73442346 -66874419 + AT_rich Low_complexity Low_complexity 1 28 0 198 306 69 0 chr10 73442357 73442429 -66874336 + L2 LINE L2 3195 3271 -1 2683 161 101 6 chr10 73442466 73443000 -66873765 - LTR36 LTR ERV1 -24 587 3 1163 174 61 9 chr10 73443099 73443374 -66873391 + AluJb SINE Alu 85 370 0 406 320 52 18 chr10 73443513 73443536 -66873229 - MLT1J LTR MaLR -200 311 290 4177 90 40 2 chr10 73443536 73444114 -66872651 - MER4A LTR ERV1 0 600 1 406 320 52 18 chr10 73444114 73444304 -66872461 - MLT1J LTR MaLR -221 290 54 27 29 0 0 chr10 73444721 73444755 -66872010 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr10 73444837 73444861 -66871904 + AT_rich Low_complexity Low_complexity 1 24 0 1414 204 96 0 chr10 73445368 73445648 -66871117 + AluJo SINE Alu 1 307 -5 588 115 23 0 chr10 73445924 73446011 -66870754 - AluSc SINE Alu -16 293 205 1960 162 61 5 chr10 73446541 73446949 -66869816 + Charlie1 DNA MER1_type 2160 2590 -171 22 0 0 0 chr10 73447254 73447276 -66869489 + AT_rich Low_complexity Low_complexity 1 22 0 384 346 35 58 chr10 73447888 73448235 -66868530 + L2 LINE L2 2933 3271 -1 185 284 0 99 chr10 73448351 73448432 -66868333 + L2 LINE L2 2 74 -3240 335 412 71 12 chr10 73449215 73449470 -66867295 + L2 LINE L2 2990 3259 -13 483 322 27 7 chr10 73449918 73450064 -66866701 + MIR3 SINE MIR 3 151 -57 1980 164 126 15 chr10 73450799 73451189 -66865576 - Tigger2a DNA MER2_type -1 433 1 2146 130 0 3 chr10 73452060 73452359 -66864406 + AluSx SINE Alu 1 298 -14 509 281 60 60 chr10 73452368 73452752 -66864013 + L1ME4a LINE L1 5643 6026 -95 3378 238 72 37 chr10 73504356 73504646 -66812119 + L1MB7 LINE L1 3314 3592 -2554 2106 118 0 7 chr10 73504646 73504962 -66811803 - AluSx SINE Alu 0 314 1 3378 238 72 37 chr10 73504962 73504986 -66811779 + L1MB7 LINE L1 3592 3614 -2532 2191 108 0 3 chr10 73504986 73505274 -66811491 - AluSq SINE Alu -26 287 1 3378 238 72 37 chr10 73505274 73506336 -66810429 + L1MB7 LINE L1 3614 4741 -1405 1826 136 0 63 chr10 73506379 73506680 -66810085 - AluSx SINE Alu -30 282 1 740 172 94 43 chr10 73506680 73506913 -66809852 + L1ME2 LINE L1 5783 6027 -137 369 238 99 108 chr10 73506928 73507151 -66809614 + L1MC4 LINE L1 7821 8041 -1 2152 148 0 0 chr10 73508064 73508362 -66808403 - AluSx SINE Alu -14 298 1 1923 143 23 10 chr10 73509166 73509466 -66807299 + AluJb SINE Alu 1 304 -8 926 200 65 182 chr10 73509554 73510049 -66806716 - L1ME3A LINE L1 -30 6140 5704 2296 98 0 13 chr10 73510088 73510405 -66806360 + AluSq SINE Alu 1 313 0 221 231 0 0 chr10 73510405 73510444 -66806321 - L2 LINE L2 -14 3299 3261 1556 159 73 18 chr10 73510698 73511025 -66805740 + L1MB3 LINE L1 5726 6070 -113 2404 45 0 14 chr10 73511074 73511362 -66805403 - AluY SINE Alu -5 306 23 182 327 96 29 chr10 73511737 73511841 -66804924 - L2 LINE L2 -12 3301 3191 2295 99 3 3 chr10 73512322 73512625 -66804140 + AluSq SINE Alu 1 303 -10 2101 114 11 0 chr10 73512674 73512955 -66803810 + AluSq SINE Alu 7 290 -23 235 0 0 54 chr10 73512960 73512997 -66803768 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2934 185 51 92 chr10 73512998 73513204 -66803561 + L1MB7 LINE L1 5048 5261 -923 2087 130 0 3 chr10 73513204 73513503 -66803262 + AluSx SINE Alu 1 298 -14 2934 185 51 92 chr10 73513503 73514477 -66802288 + L1MB7 LINE L1 5261 6175 -9 2154 133 3 3 chr10 73514767 73515069 -66801696 - AluSx SINE Alu -10 302 1 24 32 0 0 chr10 73515081 73515112 -66801653 + AT_rich Low_complexity Low_complexity 1 31 0 191 336 64 36 chr10 73515586 73515726 -66801039 + MIR SINE MIR 20 163 -99 198 425 0 9 chr10 73516444 73516557 -66800208 + L2 LINE L2 2979 3090 -182 453 217 54 54 chr10 73516703 73516832 -66799933 + L2 LINE L2 3169 3297 -16 2421 82 0 7 chr10 73516925 73517231 -66799534 + AluY SINE Alu 2 305 -6 255 185 0 108 chr10 73517563 73517611 -66799154 - MER5B DNA MER1_type 0 178 137 2496 120 11 8 chr10 73517611 73517985 -66798780 - THE1C LTR MaLR 0 375 1 255 185 0 108 chr10 73517985 73518001 -66798764 - MER5B DNA MER1_type -41 137 121 390 280 20 10 chr10 73518037 73518137 -66798628 - MER5B DNA MER1_type -50 128 28 286 227 144 31 chr10 73519423 73519520 -66797245 - MIR3 SINE MIR -9 199 92 2305 95 38 46 chr10 73519596 73519815 -66796950 + THE1B LTR MaLR 1 217 -147 2424 74 0 3 chr10 73519815 73520114 -66796651 - AluSp SINE Alu -15 298 1 2305 95 38 46 chr10 73520114 73520261 -66796504 + THE1B LTR MaLR 217 364 0 246 263 0 18 chr10 73520335 73520392 -66796373 + MIR SINE MIR 16 71 -137 1563 153 0 4 chr10 73520432 73520661 -66796104 - AluJb SINE Alu -16 296 69 962 45 0 0 chr10 73520661 73520796 -66795969 + AluSp/q SINE Alu 189 323 0 436 158 145 0 chr10 73520838 73520914 -66795851 - AluJb SINE Alu -222 90 4 2133 112 3 57 chr10 73520997 73521328 -66795437 - AluSq SINE Alu 0 313 1 836 327 34 12 chr10 73521447 73521774 -66794991 + L2 LINE L2 2596 2929 -385 1307 219 18 57 chr10 73521798 73522181 -66794584 + MLT1B LTR MaLR 23 390 0 311 320 78 30 chr10 73522235 73522466 -66794299 + L2 LINE L2 1802 2043 -1271 1677 110 9 0 chr10 73522467 73522694 -66794071 - AluSg/x SINE Alu -15 295 67 267 325 103 16 chr10 73522695 73522821 -66793944 + L2 LINE L2 2345 2481 -833 185 252 159 28 chr10 73523126 73523233 -66793532 - L2 LINE L2 -1261 2053 1933 242 278 0 0 chr10 73523267 73523321 -66793444 + MIR SINE MIR 26 79 -129 1425 165 0 16 chr10 73523323 73523578 -66793187 + MER41C LTR ERV1 1 251 -303 2187 124 3 0 chr10 73523876 73524166 -66792599 - AluSx SINE Alu -21 291 1 494 289 151 18 chr10 73524166 73524237 -66792528 - MIR SINE MIR -2 260 200 796 128 8 30 chr10 73524237 73524370 -66792395 - FLAM_C SINE Alu -3 130 1 494 289 151 18 chr10 73524370 73524523 -66792242 - MIR SINE MIR -62 200 6 830 108 85 192 chr10 73525718 73525797 -66790968 + MER46A DNA MER2_type 3 89 -2642 1998 130 0 7 chr10 73525797 73526073 -66790692 - AluSq SINE Alu -39 274 1 830 108 85 192 chr10 73526073 73526152 -66790613 + MER46A DNA MER2_type 89 125 -2606 1976 147 3 3 chr10 73526152 73526451 -66790314 - AluJo SINE Alu -13 299 1 830 108 85 192 chr10 73526451 73526551 -66790214 + MER46A DNA MER2_type 125 234 -2 705 164 35 0 chr10 73527371 73527487 -66789278 + FLAM_C SINE Alu 1 120 -13 324 0 0 0 chr10 73527487 73527523 -66789242 + (TA)n Simple_repeat Simple_repeat 2 37 0 2129 96 24 7 chr10 73528071 73528364 -66788401 - AluSq SINE Alu -15 298 1 719 289 28 32 chr10 73528642 73528891 -66787874 + MIR SINE MIR 3 250 -12 2340 117 0 0 chr10 73528891 73529198 -66787567 + AluSx SINE Alu 1 307 -5 224 167 0 0 chr10 73529334 73529376 -66787389 + L2 LINE L2 3267 3308 -5 309 268 255 6 chr10 73529533 73529690 -66787075 - MIR SINE MIR -2 260 65 354 273 99 25 chr10 73530011 73530172 -66786593 - L1ME LINE L1 -367 5754 5582 2160 108 3 0 chr10 73530327 73530613 -66786152 - AluSx SINE Alu -25 287 1 306 0 0 0 chr10 73531112 73531146 -66785619 + (CA)n Simple_repeat Simple_repeat 1 34 0 545 248 195 0 chr10 73531170 73531319 -66785446 - MIR SINE MIR -57 205 28 222 208 0 0 chr10 73532029 73532082 -66784683 + (TA)n Simple_repeat Simple_repeat 1 53 0 485 191 0 0 chr10 73533388 73533472 -66783293 + AluS SINE Alu 1 84 -229 1035 244 50 20 chr10 73533963 73534266 -66782499 - L2 LINE L2 -509 2805 2494 2212 103 0 0 chr10 73534302 73534649 -66782116 + AluSx SINE Alu 1 347 0 2085 97 0 0 chr10 73534656 73534914 -66781851 + AluSx SINE Alu 1 258 -54 279 54 0 0 chr10 73535018 73535055 -66781710 + (CA)n Simple_repeat Simple_repeat 2 38 0 344 326 68 62 chr10 73535105 73535267 -66781498 - L1ME4a LINE L1 -256 5865 5705 1774 187 3 13 chr10 73535267 73535577 -66781188 - AluJb SINE Alu -5 307 1 344 326 68 62 chr10 73535577 73535751 -66781014 - L1ME4a LINE L1 -416 5705 5527 200 195 0 0 chr10 73536478 73536519 -66780246 + A-rich Low_complexity Low_complexity 1 41 0 2282 118 3 0 chr10 73537195 73537500 -66779265 + AluSq SINE Alu 1 306 -7 1299 179 15 102 chr10 73537792 73538116 -66778649 - AluJo SINE Alu -16 296 1 2289 123 0 0 chr10 73538122 73538423 -66778342 - AluSx SINE Alu -11 301 1 312 61 184 0 chr10 73538423 73538472 -66778293 - AluSg/x SINE Alu -159 141 84 1254 195 0 5 chr10 73538472 73538693 -66778072 - AluJo SINE Alu -92 220 1 263 250 0 0 chr10 73538709 73538765 -66778000 - L2 LINE L2 0 3313 3258 2270 108 0 0 chr10 73538882 73539179 -66777586 - AluSg SINE Alu -13 297 1 2287 119 0 0 chr10 73540125 73540436 -66776329 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 73540794 73540845 -66775920 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 73541072 73541093 -66775672 + AT_rich Low_complexity Low_complexity 1 21 0 465 66 0 0 chr10 73542064 73542125 -66774640 + (TA)n Simple_repeat Simple_repeat 1 61 0 2121 118 10 29 chr10 73542125 73542439 -66774326 - AluSx SINE Alu 0 312 5 24 0 0 0 chr10 73542859 73542883 -66773882 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr10 73543254 73543282 -66773483 + AT_rich Low_complexity Low_complexity 1 28 0 355 219 11 93 chr10 73543372 73543555 -66773210 - L2 LINE L2 -103 3210 3043 2298 107 7 3 chr10 73543968 73544277 -66772488 - AluSx SINE Alu -2 310 1 618 244 57 17 chr10 73544827 73545003 -66771762 + MIR SINE MIR 13 195 -67 337 320 10 0 chr10 73545045 73545142 -66771623 + L1M4c LINE L1 1341 1438 -4946 1049 172 4 73 chr10 73545166 73545399 -66771366 + MER20 DNA MER1_type 2 218 -1 5900 111 9 13 chr10 73545439 73545687 -66771078 + L1PA16 LINE L1 4144 4392 -1774 339 25 0 0 chr10 73545687 73545727 -66771038 + (CA)n Simple_repeat Simple_repeat 2 41 0 5900 111 9 13 chr10 73545727 73546774 -66769991 + L1PA16 LINE L1 4392 5462 -704 2142 106 0 24 chr10 73546774 73547100 -66769665 - AluSx SINE Alu 0 319 1 5900 111 9 13 chr10 73547100 73547793 -66768972 + L1PA16 LINE L1 5462 6157 -9 270 342 74 30 chr10 73548552 73548754 -66768011 - MIR SINE MIR 0 262 52 1510 181 101 0 chr10 73549595 73549871 -66766894 - AluJb SINE Alu -8 304 1 715 151 75 224 chr10 73552211 73552598 -66764167 - L1MC4 LINE L1 -1 8041 7757 2163 101 42 0 chr10 73552598 73552885 -66763880 - AluSx SINE Alu -13 299 1 715 151 75 224 chr10 73552885 73553042 -66763723 - L1MC4 LINE L1 -285 7757 7578 711 146 8 8 chr10 73553102 73553232 -66763533 - L1MB7 LINE L1 -268 6414 6285 3523 123 65 56 chr10 73553238 73554054 -66762711 - Ricksha_b DNA DNA -1607 1247 318 2222 105 13 3 chr10 73554054 73554360 -66762405 - AluSc SINE Alu 0 309 1 3523 123 65 56 chr10 73554360 73554415 -66762350 - Ricksha_b DNA DNA -2536 318 265 262 83 0 0 chr10 73554428 73554464 -66762301 - Ricksha_b DNA DNA -1217 37 2 410 159 248 9 chr10 73554464 73554577 -66762188 - L1MB7 LINE L1 -384 6294 6155 1599 180 4 18 chr10 73554768 73555040 -66761725 - AluJb SINE Alu -44 268 1 611 183 7 56 chr10 73555045 73555187 -66761578 - FRAM SINE Alu -20 156 22 2057 200 39 14 chr10 73555187 73555972 -66760793 - L1MB7 LINE L1 -615 6057 5246 2957 248 106 38 chr10 73556029 73557416 -66759349 - L1MB7 LINE L1 -5047 1495 14 506 211 0 0 chr10 73557417 73557526 -66759239 - L1MC4 LINE L1 -450 7592 7484 619 213 122 30 chr10 73557534 73557764 -66759001 - L1MC4 LINE L1 -1426 6616 6366 843 193 142 0 chr10 73557827 73558060 -66758705 - L1ME2 LINE L1 -106 6058 5793 3945 89 13 0 chr10 73558090 73558838 -66757927 - L1P3 LINE L1 -618 5536 4783 3779 91 7 11 chr10 73559273 73559814 -66756951 + L1PB1 LINE L1 5610 6148 -3 2217 125 0 3 chr10 73560055 73560367 -66756398 - AluSx SINE Alu -1 311 1 2204 118 7 0 chr10 73560717 73561014 -66755751 - AluSx SINE Alu -13 299 1 483 265 129 24 chr10 73563526 73563696 -66753069 - MIR SINE MIR -26 236 49 23 0 0 0 chr10 73563986 73564009 -66752756 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr10 73565753 73565789 -66750976 + AT_rich Low_complexity Low_complexity 1 36 0 1613 150 82 11 chr10 73566156 73566436 -66750329 - AluJo SINE Alu -12 300 1 500 246 24 54 chr10 73567790 73567957 -66748808 - MIR SINE MIR -97 165 4 2314 92 3 0 chr10 73568335 73568629 -66748136 - AluSx SINE Alu -17 295 1 195 42 0 0 chr10 73568966 73568990 -66747775 + (A)n Simple_repeat Simple_repeat 1 24 0 479 253 112 18 chr10 73569342 73569385 -66747380 + MIR SINE MIR 77 115 -147 1513 168 88 0 chr10 73569385 73569682 -66747083 - AluJo SINE Alu 0 320 1 479 253 112 18 chr10 73569682 73569807 -66746958 + MIR SINE MIR 115 262 0 1958 152 7 0 chr10 73569863 73570159 -66746606 - AluSx SINE Alu -14 298 1 231 36 0 0 chr10 73571980 73572008 -66744757 + (T)n Simple_repeat Simple_repeat 1 28 0 2126 103 0 17 chr10 73572079 73572408 -66744357 + AluSq SINE Alu 1 324 0 2307 104 0 0 chr10 73573479 73573778 -66742987 + AluSc SINE Alu 11 309 0 886 86 0 39 chr10 73573915 73574043 -66742722 - AluSg/x SINE Alu 0 310 188 2279 83 0 3 chr10 73574072 73574361 -66742404 + AluY SINE Alu 6 293 -18 259 289 67 11 chr10 73574463 73574553 -66742212 - L2 LINE L2 -10 3262 3168 236 329 0 27 chr10 73574665 73574738 -66742027 - MIR3 SINE MIR -137 71 1 489 34 0 0 chr10 73575856 73575915 -66740850 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 1913 147 3 0 chr10 73575915 73576201 -66740564 - AluSx SINE Alu -25 287 1 627 287 104 28 chr10 73576203 73576520 -66740245 - L1ME LINE L1 -379 5783 5443 387 306 137 16 chr10 73576531 73576786 -66739979 - L1ME LINE L1 -518 5603 5318 1640 137 0 113 chr10 73576860 73577197 -66739568 - AluJb SINE Alu 0 302 4 2233 163 46 10 chr10 73577214 73577625 -66739140 - MSTB LTR MaLR 0 426 1 2057 103 27 10 chr10 73577710 73578011 -66738754 - AluSx SINE Alu -6 306 1 1289 107 0 18 chr10 73578023 73578192 -66738573 - AluSg/x SINE Alu -21 291 126 2319 97 0 7 chr10 73578192 73578500 -66738265 - AluSx SINE Alu -6 306 1 254 274 0 0 chr10 73578991 73579053 -66737712 - MIR SINE MIR -1 261 200 1948 148 16 0 chr10 73579879 73580182 -66736583 + AluJo SINE Alu 1 308 -4 36764 79 9 9 chr10 73580184 73586335 -66730430 + L1PA6 LINE L1 1 6154 0 2170 133 0 9 chr10 73586373 73586688 -66730077 - AluSx SINE Alu 0 312 1 2099 108 49 3 chr10 73586926 73587214 -66729551 - AluSx SINE Alu -11 301 1 2072 134 3 0 chr10 73587535 73587827 -66728938 - AluSx SINE Alu -19 293 1 4095 23 3 0 chr10 73587853 73588416 -66728349 - L1PA3 LINE L1 -713 5442 4879 6454 18 0 0 chr10 73588420 73589154 -66727611 + L1PA3 LINE L1 5420 6153 -2 2285 109 3 0 chr10 73589215 73589518 -66727247 - AluSx SINE Alu -7 305 2 667 325 15 5 chr10 73590440 73590640 -66726125 + MIR SINE MIR 7 208 -54 252 191 135 106 chr10 73590695 73590836 -66725929 + HsTC2 DNA Tc2 7 151 -1747 * 1492 202 64 17 chr10 73590826 73591094 -66725671 + HsTC2 DNA Tc2 1285 1539 -359 1952 131 7 23 chr10 73591094 73591399 -66725366 - AluSx SINE Alu -12 300 1 1492 202 64 17 chr10 73591399 73591550 -66725215 + HsTC2 DNA Tc2 1539 1900 2 274 139 0 0 chr10 73591558 73591601 -66725164 + MIR SINE MIR 220 262 0 180 323 16 0 chr10 73592005 73592067 -66724698 - MIR SINE MIR -44 218 156 402 57 0 0 chr10 73592884 73592892 -66723873 + (TG)n Simple_repeat Simple_repeat 1 61 0 402 57 0 0 chr10 73592892 73592945 -66723820 + (TG)n Simple_repeat Simple_repeat 2 54 0 1969 100 93 0 chr10 73592964 73593244 -66723521 - AluSx SINE Alu -6 306 1 1785 146 6 47 chr10 73593694 73593888 -66722877 - AluJo SINE Alu -1 311 134 2081 138 0 0 chr10 73593888 73594179 -66722586 + AluSx SINE Alu 3 293 -19 1785 146 6 47 chr10 73594179 73594306 -66722459 - AluJo SINE Alu -178 134 3 197 322 126 49 chr10 73594763 73594906 -66721859 - L2 LINE L2 0 3272 3119 2159 121 30 7 chr10 73595481 73595786 -66720979 - AluSx SINE Alu 0 312 1 2325 114 0 0 chr10 73595795 73596093 -66720672 - AluSc SINE Alu -11 298 1 1800 172 10 7 chr10 73596316 73596613 -66720152 - AluJo SINE Alu -14 298 1 2207 106 0 10 chr10 73596637 73596938 -66719827 - AluSx SINE Alu -14 298 1 275 218 36 0 chr10 73597276 73597331 -66719434 + Tigger3(Golem) DNA MER2_type 1 57 -2972 617 131 68 15 chr10 73597332 73597536 -66719229 + Tigger3(Golem) DNA MER2_type 2790 3028 -1 2140 108 0 3 chr10 73598284 73598601 -66718164 - AluSp SINE Alu 0 316 1 2078 124 13 0 chr10 73598604 73598902 -66717863 - AluSq SINE Alu -11 302 1 1606 89 5 27 chr10 73599040 73599264 -66717501 + AluSp SINE Alu 95 313 0 2396 106 0 0 chr10 73599275 73599587 -66717178 + AluSx SINE Alu 1 312 0 2348 81 10 7 chr10 73599843 73600151 -66716614 + AluSq SINE Alu 1 309 -4 1350 202 250 15 chr10 73601063 73601459 -66715306 + MLT1F LTR MaLR 24 512 -30 1103 186 43 19 chr10 73601459 73601624 -66715141 - AluJb SINE Alu -8 304 131 477 0 0 0 chr10 73601624 73601677 -66715088 + (TG)n Simple_repeat Simple_repeat 2 54 0 1103 186 43 19 chr10 73601677 73601721 -66715044 - AluJb SINE Alu -181 131 90 360 0 0 0 chr10 73601721 73601761 -66715004 + (TG)n Simple_repeat Simple_repeat 2 41 0 798 211 0 0 chr10 73601765 73601898 -66714867 - FLAM_C SINE Alu 0 133 1 1847 145 7 26 chr10 73601990 73602294 -66714471 - AluJb SINE Alu -12 300 3 329 115 0 16 chr10 73602464 73602525 -66714240 + (GA)n Simple_repeat Simple_repeat 1 60 0 2397 88 10 0 chr10 73602661 73602967 -66713798 + AluSq SINE Alu 1 309 -4 1787 142 0 74 chr10 73603479 73603803 -66712962 - AluJb SINE Alu -12 300 1 2280 124 0 6 chr10 73603823 73604137 -66712628 + AluSx SINE Alu 1 312 0 519 317 75 60 chr10 73604385 73604968 -66711797 + L2 LINE L2 2131 2817 -497 21 0 0 0 chr10 73605534 73605555 -66711210 + AT_rich Low_complexity Low_complexity 1 21 0 206 300 111 0 chr10 73606312 73606402 -66710363 + L2 LINE L2 3172 3271 -42 646 216 114 36 chr10 73606420 73606442 -66710323 + MIR SINE MIR 12 31 -231 2148 111 3 10 chr10 73606442 73606749 -66710016 + AluSq SINE Alu 1 305 -8 646 216 114 36 chr10 73606749 73606893 -66709872 + MIR SINE MIR 31 191 -71 302 196 0 18 chr10 73606902 73606958 -66709807 + Tigger5 DNA MER2_type 1 55 -2268 911 157 0 7 chr10 73606980 73607127 -66709638 - AluJb SINE Alu -1 311 166 274 236 91 0 chr10 73607135 73607190 -66709575 + Tigger5 DNA MER2_type 2264 2323 0 309 219 31 0 chr10 73607190 73607254 -66709511 + MIR SINE MIR 197 262 0 2371 72 14 0 chr10 73607844 73608137 -66708628 - AluSp SINE Alu -16 297 1 2353 145 43 10 chr10 73608375 73608769 -66707996 + MER7C DNA MER2_type 1 407 -195 2356 122 0 0 chr10 73608788 73609100 -66707665 + AluSx SINE Alu 1 312 0 254 311 0 0 chr10 73609116 73609177 -66707588 + (CA)n Simple_repeat Simple_repeat 2 62 0 1106 128 29 73 chr10 73609289 73609493 -66707272 + MER7C DNA MER2_type 407 601 -1 1257 112 0 6 chr10 73609786 73609955 -66706810 - AluSg/x SINE Alu -23 289 122 4208 167 17 21 chr10 73610152 73610255 -66706510 - MER44D DNA MER2_type -1894 593 491 2288 116 0 10 chr10 73610255 73610565 -66706200 - AluSx SINE Alu -5 307 1 4208 167 17 21 chr10 73610565 73611185 -66705580 - MER44D DNA MER2_type -1996 491 1 2079 111 0 75 chr10 73611733 73611927 -66704838 - AluSx SINE Alu -4 308 101 216 0 0 0 chr10 73611927 73611951 -66704814 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1907 148 3 0 chr10 73611951 73612234 -66704531 - AluSx SINE Alu -28 284 1 2079 111 0 75 chr10 73612234 73612371 -66704394 - AluSx SINE Alu -209 103 1 2087 111 3 54 chr10 73612570 73612886 -66703879 - AluSq SINE Alu -13 300 1 581 279 109 11 chr10 73613696 73613920 -66702845 + MIR SINE MIR 15 250 -12 1931 164 58 34 chr10 73614463 73614842 -66701923 - MLT1B LTR MaLR -2 388 1 391 318 24 21 chr10 73614845 73615005 -66701760 - MIR SINE MIR -45 163 6 3883 155 32 15 chr10 73615196 73615881 -66700884 - MER4D LTR ERV1 -171 732 36 449 83 83 0 chr10 73615967 73616039 -66700726 + MER57A-int LTR ERV1 7460 7537 0 2196 146 92 5 chr10 73616039 73616409 -66700356 + MER57A LTR ERV1 1 402 -1 1764 154 0 47 chr10 73616521 73616672 -66700093 - AluJo SINE Alu -28 284 152 2433 73 0 7 chr10 73616672 73616972 -66699793 - AluY SINE Alu -13 298 1 1764 154 0 47 chr10 73616972 73617118 -66699647 - AluJo SINE Alu -160 152 1 284 260 62 31 chr10 73617202 73617298 -66699467 + L2 LINE L2 3209 3307 -6 234 91 0 0 chr10 73617298 73617331 -66699434 + (TA)n Simple_repeat Simple_repeat 2 34 0 594 149 26 26 chr10 73617459 73617573 -66699192 + L1MC5 LINE L1 7356 7469 -492 415 315 56 17 chr10 73617624 73617802 -66698963 - LTR16C LTR ERVL -101 390 206 1039 206 119 37 chr10 73618052 73618455 -66698310 + L1MC5 LINE L1 7478 7913 -48 2185 118 0 0 chr10 73618489 73618776 -66697989 - AluSx SINE Alu -25 287 1 1974 162 0 0 chr10 73618961 73619270 -66697495 - AluJb SINE Alu -3 309 1 2043 136 7 3 chr10 73619428 73619730 -66697035 + AluSq SINE Alu 1 303 -10 2015 152 10 6 chr10 73619764 73620252 -66696513 + MER7C DNA MER2_type 1 600 -2 845 205 30 0 chr10 73620256 73620422 -66696343 + MER82 DNA MER2_type 1 171 -482 674 237 67 9 chr10 73620422 73620646 -66696119 - L1M4 LINE L1 -3080 3066 2830 201 346 0 0 chr10 73620791 73620843 -66695922 + L2 LINE L2 3234 3285 -28 799 179 0 0 chr10 73621591 73621714 -66695051 - AluJb SINE Alu -188 124 2 2258 97 10 3 chr10 73622323 73622633 -66694132 - AluSq SINE Alu -1 312 1 2535 69 0 0 chr10 73623007 73623312 -66693453 - AluY SINE Alu -6 305 1 262 281 37 44 chr10 73623654 73623789 -66692976 + L3 LINE CR1 1099 1232 -345 1212 212 56 50 chr10 73623946 73624304 -66692461 + L1MC5 LINE L1 7086 7445 -516 2294 114 0 0 chr10 73624512 73624820 -66691945 + AluSx SINE Alu 1 308 -4 1584 146 15 11 chr10 73626120 73626387 -66690378 - AluSp SINE Alu -13 300 33 352 158 179 63 chr10 73626657 73626752 -66690013 + L2 LINE L2 3208 3313 0 800 254 89 63 chr10 73627224 73627305 -66689460 + HAL1 LINE L1 1017 1094 -1413 2020 127 0 31 chr10 73627305 73627638 -66689127 - AluSx SINE Alu 0 324 1 800 254 89 63 chr10 73627638 73628047 -66688718 + HAL1 LINE L1 1094 1521 -986 1297 116 34 179 chr10 73628088 73628176 -66688589 - MER33 DNA MER1_type -2261 324 225 2899 116 57 7 chr10 73628176 73628634 -66688131 + L1MA5A LINE L1 5813 6293 -4 1297 116 34 179 chr10 73628634 73628658 -66688107 - MER33 DNA MER1_type -2360 225 199 2223 86 0 17 chr10 73628658 73628948 -66687817 - AluY SINE Alu -24 287 3 1297 116 34 179 chr10 73628948 73629213 -66687552 - MER33 DNA MER1_type -2386 199 1 182 324 0 56 chr10 73629484 73629555 -66687210 + MIR3 SINE MIR 101 167 -41 200 312 99 28 chr10 73629811 73629952 -66686813 - MIR SINE MIR -14 248 98 509 286 96 2 chr10 73630440 73630748 -66686017 + L1ME LINE L1 5106 5437 -725 4618 191 42 22 chr10 73630764 73632044 -66684721 + L1M1 LINE L1 3257 4565 -3000 557 312 23 50 chr10 73632055 73632285 -66684480 + L1ME LINE L1 5428 5650 -520 2372 109 3 0 chr10 73632285 73632597 -66684168 + AluSq SINE Alu 1 313 0 557 312 23 50 chr10 73632597 73632667 -66684098 + L1ME LINE L1 5650 5720 -450 1523 201 16 16 chr10 73632691 73632995 -66683770 + AluJo SINE Alu 1 304 -8 2351 188 64 110 chr10 73633351 73634113 -66682652 + LTR8A LTR ERV1 1 727 0 329 190 76 13 chr10 73634114 73634193 -66682572 + MLT1H LTR MaLR 464 547 -2 748 183 33 7 chr10 73634483 73634636 -66682129 - MER58 DNA MER1_type -158 183 27 2214 188 136 104 chr10 73634690 73635528 -66681237 - LTR28 LTR ERV1 -4 1016 1 703 130 10 0 chr10 73635705 73635805 -66680960 + FLAM_C SINE Alu 14 114 -29 188 33 0 33 chr10 73635805 73635835 -66680930 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2255 87 17 0 chr10 73635873 73636161 -66680604 + AluY SINE Alu 1 293 -18 1860 155 113 76 chr10 73636169 73636409 -66680356 + LTR2B LTR ERV1 3 233 -257 231 36 0 0 chr10 73636409 73636437 -66680328 + (TTCTG)n Simple_repeat Simple_repeat 1 28 0 1860 155 113 76 chr10 73636437 73636667 -66680098 + LTR2B LTR ERV1 233 490 0 960 165 24 0 chr10 73637560 73637724 -66679041 - MER4E LTR ERV1 0 779 612 235 262 5 80 chr10 73638138 73638325 -66678440 + C-rich Low_complexity Low_complexity 4 176 0 2271 93 0 3 chr10 73638815 73639104 -66677661 - AluSc SINE Alu -21 288 1 258 169 0 34 chr10 73639283 73639342 -66677423 + T-rich Low_complexity Low_complexity 5 61 0 4455 152 82 20 chr10 73640398 73640538 -66676227 - MER6 DNA MER2_type 0 865 735 2143 118 0 0 chr10 73640538 73640835 -66675930 + AluSx SINE Alu 1 297 -15 4455 152 82 20 chr10 73640835 73641491 -66675274 - MER6 DNA MER2_type -130 735 20 2243 99 10 16 chr10 73641695 73642007 -66674758 + AluSx SINE Alu 1 310 -2 786 174 0 0 chr10 73642260 73642375 -66674390 - FLAM_A SINE Alu -17 116 2 652 245 90 21 chr10 73643101 73643155 -66673610 - MIR SINE MIR -24 238 189 2070 126 3 3 chr10 73643155 73643449 -66673316 - AluSx SINE Alu -18 294 1 652 245 90 21 chr10 73643449 73643582 -66673183 - MIR SINE MIR -73 189 38 2386 106 0 0 chr10 73643665 73643968 -66672797 + AluSx SINE Alu 1 303 -9 1517 196 14 11 chr10 73643968 73644249 -66672516 - AluJo SINE Alu -30 282 1 187 212 0 0 chr10 73644566 73644599 -66672166 + L2 LINE L2 3224 3256 -16 2227 116 7 0 chr10 73645588 73645889 -66670876 - AluSx SINE Alu -9 303 1 811 136 0 8 chr10 73646538 73646656 -66670109 - AluSq/x SINE Alu -195 117 1 448 292 50 46 chr10 73646747 73646966 -66669799 - MIR SINE MIR -14 248 29 1825 168 10 3 chr10 73647255 73647547 -66669218 - AluJo SINE Alu -18 294 1 312 236 0 0 chr10 73647619 73647683 -66669082 + Charlie8 DNA MER1_type 1360 1415 -1002 500 320 148 35 chr10 73647700 73648328 -66668437 - L2 LINE L2 -554 2760 2062 2253 117 0 0 chr10 73649120 73649428 -66667337 - AluSx SINE Alu 0 312 5 362 349 113 18 chr10 73650186 73650461 -66666304 - L3 LINE CR1 -56 1521 1221 246 81 0 0 chr10 73650544 73650581 -66666184 + (TA)n Simple_repeat Simple_repeat 2 38 0 2351 85 10 0 chr10 73650581 73650876 -66665889 - AluSx SINE Alu -14 298 1 344 291 82 24 chr10 73652077 73652283 -66664482 + HAL1b LINE L1 286 503 -845 612 186 0 157 chr10 73652302 73652474 -66664291 + AluJb SINE Alu 137 281 -31 794 150 15 0 chr10 73652670 73652803 -66663962 + MER58B DNA MER1_type 204 338 -3 210 220 60 20 chr10 73652834 73652934 -66663831 + A-rich Low_complexity Low_complexity 2 105 0 756 148 0 0 chr10 73652953 73653098 -66663667 - FLAM_C SINE Alu 0 145 1 368 291 160 23 chr10 73653205 73653380 -66663385 - MIR SINE MIR -57 205 7 28 0 0 0 chr10 73653431 73653459 -66663306 + AT_rich Low_complexity Low_complexity 1 28 0 294 29 0 0 chr10 73653602 73653637 -66663128 + (CA)n Simple_repeat Simple_repeat 1 35 0 1982 143 4 0 chr10 73654184 73654491 -66662274 - AluSx SINE Alu 0 308 1 5212 107 33 4 chr10 73654521 73655363 -66661402 + HSMAR2 DNA Mariner 1 867 -435 2171 109 7 3 chr10 73655838 73656141 -66660624 + AluSx SINE Alu 1 304 -8 288 362 0 11 chr10 73656641 73656735 -66660030 + MIR SINE MIR 20 112 -150 219 204 0 0 chr10 73656772 73656826 -66659939 + (CATA)n Simple_repeat Simple_repeat 3 56 0 291 202 111 50 chr10 73657839 73657938 -66658827 + AluJo SINE Alu 43 147 -155 1134 185 18 130 chr10 73657943 73658273 -66658492 + AluJo SINE Alu 18 310 -2 40 59 0 0 chr10 73658437 73658505 -66658260 + AT_rich Low_complexity Low_complexity 1 68 0 758 141 50 0 chr10 73658596 73658717 -66658048 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr10 73658720 73658746 -66658019 + AT_rich Low_complexity Low_complexity 1 26 0 2044 139 27 9 chr10 73658799 73659130 -66657635 + MER1B DNA MER1_type 1 337 0 2194 131 0 0 chr10 73659640 73659946 -66656819 + AluSx SINE Alu 1 306 -6 233 347 25 41 chr10 73660118 73660314 -66656451 - L2 LINE L2 -1771 1543 1351 2131 125 3 0 chr10 73660582 73660877 -66655888 + AluSx SINE Alu 1 296 -16 2237 123 0 0 chr10 73661204 73661505 -66655260 - AluSx SINE Alu -11 301 1 2856 155 42 0 chr10 73662235 73662759 -66654006 + L1MB2 LINE L1 5583 6128 -43 273 132 19 0 chr10 73662957 73663010 -66653755 + L1MB4 LINE L1 6126 6179 -1 25 51 0 0 chr10 73663040 73663079 -66653686 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr10 73663112 73663140 -66653625 + AT_rich Low_complexity Low_complexity 1 28 0 635 337 73 26 chr10 73663161 73663310 -66653455 + L1MEc LINE L1 32 173 -6223 2253 123 7 0 chr10 73663310 73663620 -66653145 + AluSx SINE Alu 1 312 0 635 337 73 26 chr10 73663620 73664048 -66652717 + L1MEc LINE L1 173 636 -5760 1701 119 48 122 chr10 73664050 73664195 -66652570 + AluSx SINE Alu 1 155 -157 4302 31 0 0 chr10 73664195 73664704 -66652061 + L1PA4 LINE L1 5647 6155 0 1701 119 48 122 chr10 73664704 73664893 -66651872 + AluSx SINE Alu 155 310 -2 2052 132 13 13 chr10 73665086 73665397 -66651368 - AluSx SINE Alu -1 311 1 180 0 0 0 chr10 73665890 73665910 -66650855 + (ATG)n Simple_repeat Simple_repeat 2 21 0 383 203 0 93 chr10 73665913 73666031 -66650734 - MIR SINE MIR -7 255 149 631 208 96 109 chr10 73666039 73666119 -66650646 - LTR41 LTR ERVL -1 772 692 1374 196 105 18 chr10 73666119 73666405 -66650360 + AluJo SINE Alu 1 311 -1 631 208 96 109 chr10 73666405 73666636 -66650129 - LTR41 LTR ERVL -81 692 465 380 228 177 6 chr10 73666843 73667001 -66649764 - LTR41 LTR ERVL -587 186 2 283 286 0 14 chr10 73667024 73667094 -66649671 - MIR SINE MIR -160 102 34 308 207 33 50 chr10 73667645 73667766 -66648999 + MLT1H LTR MaLR 431 549 0 2444 87 0 3 chr10 73667796 73668105 -66648660 - AluSx SINE Alu -4 308 1 318 50 0 0 chr10 73668248 73668288 -66648477 + (TA)n Simple_repeat Simple_repeat 2 41 0 2218 138 0 0 chr10 73668288 73668586 -66648179 - AluSx SINE Alu -14 298 1 2151 119 3 0 chr10 73669011 73669296 -66647469 - AluSx SINE Alu -26 286 1 2084 131 0 0 chr10 73670137 73670420 -66646345 + AluSx SINE Alu 5 287 -25 180 315 35 107 chr10 73670576 73670773 -66645992 - L2 LINE L2 -551 2763 2581 622 195 76 8 chr10 73670832 73670950 -66645815 + FLAM_A SINE Alu 1 126 -7 303 383 25 31 chr10 73671089 73671251 -66645514 + MIR3 SINE MIR 25 185 -23 181 365 94 0 chr10 73671422 73671507 -66645258 - MIR SINE MIR -82 126 34 36 23 0 0 chr10 73671642 73671685 -66645080 + AT_rich Low_complexity Low_complexity 1 43 0 1349 238 71 55 chr10 73671688 73672239 -66644526 + L1MC4a LINE L1 5303 5867 -1941 825 157 0 8 chr10 73672239 73672373 -66644392 + FLAM_C SINE Alu 1 133 0 1349 238 71 55 chr10 73672373 73672455 -66644310 + L1MC4a LINE L1 5867 5946 -1862 33 0 0 0 chr10 73672706 73672739 -66644026 + AT_rich Low_complexity Low_complexity 1 33 0 2187 110 36 3 chr10 73673299 73673600 -66643165 + AluSq SINE Alu 1 311 -2 647 210 8 8 chr10 73674127 73674251 -66642514 - FLAM_C SINE Alu -19 124 1 301 206 67 127 chr10 73674421 73674489 -66642276 - HAL1b LINE L1 -7 1341 1270 8938 153 80 80 chr10 73674489 73674984 -66641781 + Tigger1 DNA MER2_type 2 495 -1923 2502 82 0 13 chr10 73674984 73675301 -66641464 + AluSq SINE Alu 1 313 0 8938 153 80 80 chr10 73675301 73676282 -66640483 + Tigger1 DNA MER2_type 495 1474 -944 2407 91 3 0 chr10 73676282 73676579 -66640186 + AluSp SINE Alu 3 300 -13 8938 153 80 80 chr10 73676579 73677318 -66639447 + Tigger1 DNA MER2_type 1474 2211 -207 1994 137 0 23 chr10 73677318 73677617 -66639148 - AluSx SINE Alu -20 292 1 8938 153 80 80 chr10 73677617 73677650 -66639115 + Tigger1 DNA MER2_type 2211 2242 -176 2227 117 3 0 chr10 73677650 73677957 -66638808 - AluSg SINE Alu -2 308 1 8938 153 80 80 chr10 73677957 73678119 -66638646 + Tigger1 DNA MER2_type 2242 2417 -1 301 206 67 127 chr10 73678119 73678215 -66638550 - HAL1b LINE L1 -78 1270 1187 1084 212 34 0 chr10 73678226 73678462 -66638303 - MLT1A1 LTR MaLR 0 365 122 495 202 71 0 chr10 73678527 73678626 -66638139 + Tigger4(Zombi) DNA MER2_type 1 106 -2625 * 2283 118 25 32 chr10 73678620 73679054 -66637711 + Tigger4(Zombi) DNA MER2_type 2301 2731 0 2173 113 0 0 chr10 73679502 73679830 -66636935 - AluSx SINE Alu 0 328 1 1991 124 7 0 chr10 73680401 73680674 -66636091 + AluSx SINE Alu 1 275 -37 2138 127 3 3 chr10 73680974 73681282 -66635483 - AluSq SINE Alu -5 308 1 211 328 143 42 chr10 73681367 73681486 -66635279 - L2 LINE L2 -5 3267 3137 1457 178 0 128 chr10 73681511 73681854 -66634911 + AluJb SINE Alu 1 299 -13 1773 161 56 7 chr10 73681857 73682161 -66634604 + 7SLRNA srpRNA srpRNA 2 320 0 2160 115 10 0 chr10 73682336 73682631 -66634134 - AluSx SINE Alu -14 298 1 1741 143 40 0 chr10 73683612 73683885 -66632880 - AluJb SINE Alu -18 294 11 1314 112 5 0 chr10 73684136 73684324 -66632441 - AluSg/x SINE Alu -7 303 115 1746 68 0 0 chr10 73684466 73684672 -66632093 + AluSx SINE Alu 1 206 -106 414 56 0 0 chr10 73684674 73684728 -66632037 + AluSx SINE Alu 244 297 -14 1110 190 101 57 chr10 73684808 73685067 -66631698 + MER2 DNA MER2_type 2 279 -66 1915 162 10 0 chr10 73685067 73685364 -66631401 - AluJo SINE Alu -11 301 2 1110 190 101 57 chr10 73685364 73685420 -66631345 + MER2 DNA MER2_type 279 331 -14 2325 95 0 3 chr10 73685422 73685718 -66631047 + AluSx SINE Alu 1 295 -17 1538 196 33 4 chr10 73686264 73686539 -66630226 + AluJo SINE Alu 21 303 -9 1824 146 0 48 chr10 73686541 73686835 -66629930 + AluSx SINE Alu 1 280 -32 308 24 0 24 chr10 73686835 73686877 -66629888 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 355 240 49 60 chr10 73686890 73687033 -66629732 + MER34B LTR ERV1 366 508 -57 2175 112 128 16 chr10 73687033 73687416 -66629349 + MSTA LTR MaLR 1 426 -2 355 240 49 60 chr10 73687416 73687455 -66629310 + MER34B LTR ERV1 508 546 -19 403 305 35 25 chr10 73687495 73687698 -66629067 + L1M4 LINE L1 4019 4223 -1923 1010 199 10 5 chr10 73687717 73687923 -66628842 - MER20 DNA MER1_type -4 215 9 308 310 24 75 chr10 73687929 73688059 -66628706 + L1M4 LINE L1 4239 4355 -1791 2341 87 0 3 chr10 73688059 73688358 -66628407 + AluSx SINE Alu 1 298 -14 308 310 24 75 chr10 73688358 73688440 -66628325 + L1M4 LINE L1 4355 4440 -1706 499 253 69 87 chr10 73688520 73688797 -66627968 + L1M4 LINE L1 4573 4844 -1302 612 121 23 15 chr10 73688842 73688974 -66627791 + L1M4c LINE L1 1887 2019 -4365 351 213 85 0 chr10 73688986 73689080 -66627685 + FAM SINE Alu 74 175 0 3824 241 27 15 chr10 73689090 73689582 -66627183 + L1M4c LINE L1 2353 2838 -3544 2320 77 0 19 chr10 73689582 73689915 -66626850 + AluSg SINE Alu 1 310 0 3824 241 27 15 chr10 73689915 73690727 -66626038 + L1M4c LINE L1 2838 3673 -2709 1602 155 49 0 chr10 73690794 73691059 -66625706 + AluSx SINE Alu 1 278 -34 418 109 0 0 chr10 73691060 73691124 -66625641 - Alu SINE Alu -9 302 239 1453 161 0 39 chr10 73741139 73741399 -66575366 - AluJo SINE Alu -6 306 57 296 281 38 81 chr10 73741400 73741560 -66575205 + MIR SINE MIR 94 246 -16 315 243 37 19 chr10 73741898 73742005 -66574760 + MIR SINE MIR 72 180 -82 2325 112 0 0 chr10 73742087 73742390 -66574375 - AluSx SINE Alu -9 303 1 2172 137 0 0 chr10 73743035 73743334 -66573431 - AluSx SINE Alu -13 299 1 824 201 5 64 chr10 73743361 73743518 -66573247 + AluJo SINE Alu 121 265 -47 2429 85 0 3 chr10 73743518 73743825 -66572940 - AluY SINE Alu -5 306 1 824 201 5 64 chr10 73743825 73743871 -66572894 + AluJo SINE Alu 265 312 0 1521 101 0 0 chr10 73745086 73745285 -66571480 - AluSq SINE Alu -6 307 109 1971 141 7 0 chr10 73745903 73746202 -66570563 - AluSx SINE Alu -11 301 1 2151 119 0 7 chr10 73746369 73746672 -66570093 - AluSq SINE Alu -12 301 1 205 188 141 0 chr10 73747559 73747623 -66569142 - MIR SINE MIR -59 203 131 2041 76 0 60 chr10 73747841 73748143 -66568622 - AluY SINE Alu -16 295 12 246 32 0 0 chr10 73750139 73750170 -66566595 + (TG)n Simple_repeat Simple_repeat 1 31 0 1077 164 129 91 chr10 73752682 73752851 -66563914 - AluJo SINE Alu -4 298 112 2316 99 0 0 chr10 73752851 73753155 -66563610 + AluSg SINE Alu 1 304 -6 1077 164 129 91 chr10 73753155 73753272 -66563493 - AluJo SINE Alu -190 112 1 419 149 27 0 chr10 73753371 73753445 -66563320 + U3 snRNA snRNA 1 76 -141 218 299 15 15 chr10 73753627 73753694 -66563071 + L2 LINE L2 3182 3248 -24 2089 128 0 3 chr10 73754097 73754387 -66562378 - AluSx SINE Alu -23 289 1 2511 72 0 7 chr10 73754396 73754703 -66562062 - AluSg SINE Alu 0 310 1 1335 218 6 47 chr10 73754732 73755049 -66561716 - AluJo SINE Alu -7 305 2 2090 111 0 0 chr10 73755495 73755774 -66560991 - AluSx SINE Alu -33 279 1 1915 169 3 0 chr10 73755775 73756070 -66560695 - AluJo SINE Alu -14 298 3 480 108 27 0 chr10 73756195 73756269 -66560496 + AluS SINE Alu 2 77 -236 2041 124 3 37 chr10 73756525 73756848 -66559917 + AluSx SINE Alu 1 312 0 229 287 186 8 chr10 73756884 73757013 -66559752 - MIR SINE MIR -15 247 96 199 304 148 44 chr10 73757017 73757152 -66559613 - L2 LINE L2 -7 3306 3158 2270 98 7 7 chr10 73757263 73757569 -66559196 + AluSq SINE Alu 1 306 -7 552 255 27 13 chr10 73757771 73757920 -66558845 - MIR SINE MIR -44 218 68 330 263 32 21 chr10 73757925 73758020 -66558745 - MIR SINE MIR -156 106 11 420 204 199 71 chr10 73758102 73758190 -66558575 + MER112 DNA MER1_type 17 92 -168 1758 133 66 11 chr10 73758190 73758504 -66558261 + AluSx SINE Alu 1 312 0 420 204 199 71 chr10 73758504 73758626 -66558139 + MER112 DNA MER1_type 92 254 -6 32 0 0 0 chr10 73759084 73759116 -66557649 + AT_rich Low_complexity Low_complexity 1 32 0 1613 171 3 41 chr10 73759124 73759272 -66557493 - AluJo SINE Alu -30 282 149 2459 80 0 19 chr10 73759272 73759586 -66557179 - AluSg SINE Alu -2 308 1 1613 171 3 41 chr10 73759586 73759730 -66557035 - AluJo SINE Alu -163 149 1 545 72 0 60 chr10 73759738 73759821 -66556944 - L1PA8 LINE L1 -5 6167 6090 32 0 0 0 chr10 73759822 73759854 -66556911 + AT_rich Low_complexity Low_complexity 1 32 0 2100 111 0 20 chr10 73759967 73760103 -66556662 + AluSx SINE Alu 1 138 -174 2261 101 3 3 chr10 73760103 73760399 -66556366 + AluSp SINE Alu 1 296 -17 2100 111 0 20 chr10 73760399 73760559 -66556206 + AluSx SINE Alu 138 291 -21 24 32 0 0 chr10 73760678 73760709 -66556056 + AT_rich Low_complexity Low_complexity 1 31 0 2408 81 3 0 chr10 73761105 73761402 -66555363 - AluSc SINE Alu -11 298 1 2317 99 7 0 chr10 73761402 73761695 -66555070 - AluSx SINE Alu -15 297 3 2024 137 3 0 chr10 73761766 73762065 -66554700 - AluSx SINE Alu -12 300 1 378 0 0 0 chr10 73762174 73762216 -66554549 + (TG)n Simple_repeat Simple_repeat 2 43 0 355 302 39 16 chr10 73762270 73762399 -66554366 + MIR3 SINE MIR 46 177 -31 768 199 0 8 chr10 73762407 73762538 -66554227 - FLAM_A SINE Alu -2 131 2 192 255 59 0 chr10 73763120 73763171 -66553594 + L2 LINE L2 3213 3266 -6 862 171 59 13 chr10 73763437 73763589 -66553176 + FRAM SINE Alu 1 159 -17 2198 100 0 10 chr10 73764539 73764840 -66551925 - AluSc SINE Alu -9 300 3 243 0 0 0 chr10 73765110 73765137 -66551628 + (T)n Simple_repeat Simple_repeat 1 27 0 4810 146 38 70 chr10 73765739 73765908 -66550857 - MER6 DNA MER2_type 0 865 692 2099 119 17 0 chr10 73765908 73766201 -66550564 + AluSx SINE Alu 1 298 -14 4810 146 38 70 chr10 73766201 73766269 -66550496 - MER6 DNA MER2_type -173 692 623 1878 171 3 7 chr10 73766269 73766574 -66550191 + AluJb SINE Alu 1 304 -8 4810 146 38 70 chr10 73766574 73767224 -66549541 - MER6 DNA MER2_type -242 623 5 233 255 121 28 chr10 73767227 73767299 -66549466 + MER91A DNA MER1_type 56 140 -50 2202 116 0 3 chr10 73767299 73767592 -66549173 - AluSx SINE Alu -20 292 1 233 255 121 28 chr10 73767592 73767629 -66549136 + MER91A DNA MER1_type 140 172 -18 2065 126 7 3 chr10 73768011 73768313 -66548452 + AluSg SINE Alu 1 303 -7 452 309 5 80 chr10 73768523 73768724 -66548041 + MIR3 SINE MIR 3 188 -20 2177 97 3 39 chr10 73768725 73769034 -66547731 - AluSp SINE Alu -11 302 5 219 303 164 8 chr10 73769183 73769248 -66547517 + MIR SINE MIR 12 66 -196 1893 128 3 83 chr10 73769248 73769440 -66547325 - AluSx SINE Alu -11 301 144 2300 88 3 38 chr10 73769440 73769759 -66547006 - AluSp SINE Alu -5 308 1 1893 128 3 83 chr10 73769759 73769893 -66546872 - AluSx SINE Alu -168 144 1 219 303 164 8 chr10 73769893 73769949 -66546816 + MIR SINE MIR 66 152 -110 2161 125 0 0 chr10 73769978 73770275 -66546490 - AluSg SINE Alu -12 298 2 181 347 21 21 chr10 73770292 73770387 -66546378 + L2 LINE L2 2777 2871 -443 1418 116 0 10 chr10 73770944 73771143 -66545622 - AluSg/x SINE Alu -16 296 100 1752 191 0 10 chr10 73771157 73771461 -66545304 - AluJb SINE Alu -11 301 1 2517 75 0 0 chr10 73771857 73772163 -66544602 - AluY SINE Alu -5 306 1 577 176 15 81 chr10 73772415 73772551 -66544214 - FLAM_A SINE Alu -6 127 1 2102 128 14 0 chr10 73772565 73772861 -66543904 - AluSx SINE Alu -12 300 1 2201 125 0 0 chr10 73773375 73773680 -66543085 - AluSq SINE Alu -8 305 1 240 35 0 0 chr10 73774080 73774109 -66542656 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1670 187 0 11 chr10 73774114 73774397 -66542368 - AluJb SINE Alu -32 280 1 1826 96 126 4 chr10 73775103 73775364 -66541401 + AluSg1 SINE Alu 1 293 -16 1032 206 42 0 chr10 73775955 73776169 -66540596 - AluJo SINE Alu -9 303 81 306 0 0 0 chr10 73776260 73776294 -66540471 + (TG)n Simple_repeat Simple_repeat 1 34 0 198 0 0 0 chr10 73776973 73776995 -66539770 + (A)n Simple_repeat Simple_repeat 1 22 0 1308 115 0 21 chr10 73777331 73777523 -66539242 + AluSx SINE Alu 20 207 -105 797 193 33 40 chr10 73778358 73778508 -66538257 - AluJo SINE Alu -162 150 2 293 273 10 10 chr10 73778515 73778614 -66538151 - L1ME LINE L1 -302 5819 5721 196 216 0 149 chr10 73778642 73778716 -66538049 + L2 LINE L2 3179 3241 -31 2540 54 0 0 chr10 73780088 73780386 -66536379 - AluY SINE Alu -13 298 1 369 0 0 0 chr10 73781960 73782001 -66534764 + (TG)n Simple_repeat Simple_repeat 2 42 0 2149 98 0 0 chr10 73782002 73782277 -66534488 - AluSg SINE Alu -35 275 1 774 164 7 57 chr10 73782364 73782504 -66534261 - FLAM_A SINE Alu 0 133 1 2150 103 3 7 chr10 73782566 73782858 -66533907 - AluSp SINE Alu -22 291 1 995 221 6 0 chr10 73784071 73784252 -66532513 + MER58A DNA MER1_type 42 223 -1 242 253 24 12 chr10 73784462 73784545 -66532220 + CT-rich Low_complexity Low_complexity 4 87 0 1579 166 42 11 chr10 73784614 73784898 -66531867 + AluJo SINE Alu 1 293 -19 240 283 123 47 chr10 73784952 73785058 -66531707 - MIR SINE MIR -79 129 16 209 200 0 0 chr10 73785120 73785155 -66531610 + polypyrimidine Low_complexity Low_complexity 2 36 0 2317 94 3 0 chr10 73785273 73785571 -66531194 - AluSx SINE Alu -13 299 1 200 176 0 0 chr10 73785752 73785786 -66530979 + (TG)n Simple_repeat Simple_repeat 2 35 0 1405 125 26 0 chr10 73785881 73786113 -66530652 - L1MC3 LINE L1 -1 7784 7547 2141 224 51 27 chr10 73786535 73787114 -66529651 + L1ME3A LINE L1 5523 6117 -53 1077 113 28 0 chr10 73787727 73787904 -66528861 - L1MA2 LINE L1 -109 6195 6014 183 80 0 0 chr10 73787909 73787934 -66528831 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 972 192 61 33 chr10 73787964 73788178 -66528587 - AluJo SINE Alu -92 220 1 407 259 139 74 chr10 73788199 73788419 -66528346 - MIR SINE MIR -19 243 14 185 283 151 19 chr10 73788714 73788820 -66527945 + L2 LINE L2 3193 3312 -1 584 315 149 5 chr10 73789074 73789296 -66527469 + L2 LINE L2 2548 2801 -513 435 231 22 0 chr10 73789307 73789398 -66527367 + MER63 DNA MER1_type 27 745 -317 791 298 43 28 chr10 73789458 73789713 -66527052 + L2 LINE L2 2811 3069 -244 1212 94 6 0 chr10 73790196 73790356 -66526409 + AluSq SINE Alu 150 310 -3 189 107 0 0 chr10 73790519 73790547 -66526218 + (T)n Simple_repeat Simple_repeat 1 28 0 2457 86 0 0 chr10 73790927 73791229 -66525536 + AluY SINE Alu 1 302 -9 394 210 167 7 chr10 73791386 73791524 -66525241 - L1ME4a LINE L1 -1 6120 5961 442 278 114 15 chr10 73792082 73792485 -66524280 - L1ME4a LINE L1 -2016 5792 5255 261 322 11 23 chr10 73792548 73792635 -66524130 + Tigger8 DNA MER2_type 578 663 -3 335 312 18 9 chr10 73792730 73792839 -66523926 + L3 LINE CR1 1341 1450 -127 1438 189 0 68 chr10 73792972 73793144 -66523621 - AluJb SINE Alu -12 300 159 2308 88 0 3 chr10 73793144 73793438 -66523327 - AluY SINE Alu -18 293 1 1438 189 0 68 chr10 73793438 73793587 -66523178 - AluJb SINE Alu -153 159 1 2201 102 20 3 chr10 73793619 73793914 -66522851 + AluSq SINE Alu 1 300 -13 606 228 15 37 chr10 73794077 73794213 -66522552 - FLAM_A SINE Alu 0 133 1 270 0 0 0 chr10 73794271 73794301 -66522464 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 307 67 67 chr10 73794335 73794635 -66522130 - L1MC4a LINE L1 -1910 5898 5599 374 194 19 68 chr10 73794643 73794746 -66522019 + Tigger4(Zombi) DNA MER2_type 2632 2729 -2 440 294 17 28 chr10 73795681 73795861 -66520904 - L2 LINE L2 -15 3298 3121 1440 306 45 40 chr10 73795861 73796391 -66520374 - LTR67 LTR ERVL -3 554 22 366 270 30 137 chr10 73796450 73796720 -66520045 - L2 LINE L2 -245 3068 2828 2173 121 0 16 chr10 73797197 73797503 -66519262 + AluSx SINE Alu 1 301 -11 986 166 22 17 chr10 73797740 73797921 -66518844 - MER20 DNA MER1_type -4 215 34 2111 135 0 6 chr10 73797964 73798275 -66518490 - AluSx SINE Alu -3 309 1 2181 79 76 7 chr10 73798312 73798603 -66518162 - AluSx SINE Alu -1 311 1 856 170 0 0 chr10 73798967 73799102 -66517663 - AluJb SINE Alu -177 135 1 609 192 88 16 chr10 73799117 73799242 -66517523 - AluSq/x SINE Alu -178 134 1 3681 175 90 28 chr10 73799443 73800298 -66516467 - L1MB7 LINE L1 0 6184 5277 473 286 33 17 chr10 73801036 73801182 -66515583 + MIR SINE MIR 6 160 -48 2281 107 0 0 chr10 73801191 73801491 -66515274 + AluSg SINE Alu 1 300 -10 533 127 0 13 chr10 73801501 73801580 -66515185 + FLAM_A SINE Alu 46 123 -19 357 281 67 0 chr10 73801585 73801674 -66515091 + MIR SINE MIR 161 255 -7 230 54 0 27 chr10 73801682 73801719 -66515046 + (TA)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr10 73801912 73801946 -66514819 + AT_rich Low_complexity Low_complexity 1 34 0 949 185 0 0 chr10 73802117 73802279 -66514486 + FRAM SINE Alu 4 165 -11 522 192 131 3 chr10 73802312 73802533 -66514232 + MER33 DNA MER1_type 19 324 0 1571 152 25 29 chr10 73802641 73802918 -66513847 - AluJb SINE Alu -23 289 14 1045 151 27 16 chr10 73802918 73803103 -66513662 + AluJb SINE Alu 111 297 -15 255 188 31 16 chr10 73803103 73803167 -66513598 - L1M3 LINE L1 -326 5854 5790 698 308 146 45 chr10 73803167 73803634 -66513131 + L3 LINE CR1 640 1153 -424 523 226 0 0 chr10 73803670 73803776 -66512989 + L3 LINE CR1 1392 1497 -80 325 202 92 46 chr10 73803903 73804012 -66512753 + L1ME4a LINE L1 5991 6104 -17 1902 171 3 3 chr10 73805525 73805834 -66510931 - AluSx SINE Alu -3 309 1 1958 108 72 0 chr10 73807712 73807990 -66508775 - AluSx SINE Alu -14 298 1 2137 89 11 4 chr10 73808145 73808426 -66508339 + AluSc SINE Alu 12 294 -15 224 230 0 40 chr10 73808607 73808681 -66508084 + T-rich Low_complexity Low_complexity 3 73 0 2325 99 0 3 chr10 73809121 73809433 -66507332 - AluSx SINE Alu 0 312 2 1590 180 50 32 chr10 73809753 73809780 -66506985 + MER7A DNA MER2_type 2 27 -3011 2454 59 16 0 chr10 73809780 73810085 -66506680 + AluY SINE Alu 1 310 -1 1590 180 50 32 chr10 73810085 73810397 -66506368 + MER7A DNA MER2_type 27 346 0 236 175 16 0 chr10 73811028 73811091 -66505674 + GA-rich Low_complexity Low_complexity 1 64 0 2162 121 0 13 chr10 73811160 73811466 -66505299 + AluSx SINE Alu 1 302 -10 295 250 0 0 chr10 73811533 73811589 -66505176 - L2 LINE L2 -1 3312 3257 268 167 28 0 chr10 73812045 73812117 -66504648 + (TA)n Simple_repeat Simple_repeat 1 74 0 1031 115 0 0 chr10 73812528 73812667 -66504098 + AluSg/x SINE Alu 148 286 -26 182 31 0 62 chr10 73812967 73812999 -66503766 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2149 112 3 3 chr10 73813268 73813562 -66503203 - AluSq SINE Alu -19 294 1 204 260 0 26 chr10 73813700 73813777 -66502988 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 753 168 7 0 chr10 73813866 73814015 -66502750 - L1MB3 LINE L1 0 6183 6034 250 170 0 21 chr10 73814136 73814183 -66502582 - L2 LINE L2 0 3313 3268 1435 163 69 45 chr10 73815583 73815872 -66500893 + AluJo SINE Alu 1 296 -16 763 178 153 43 chr10 73815884 73816086 -66500679 - MER33 DNA MER1_type -2273 312 69 2312 78 3 0 chr10 73816086 73816380 -66500385 - AluSx SINE Alu -17 295 1 763 178 153 43 chr10 73816380 73816458 -66500307 - MER33 DNA MER1_type -2516 69 1 829 173 0 0 chr10 73816568 73816695 -66500070 + FLAM_C SINE Alu 1 127 -16 1476 171 0 81 chr10 73817023 73817332 -66499433 + AluJb SINE Alu 11 294 -18 474 204 45 30 chr10 73817641 73817773 -66498992 + MER94 DNA DNA 1 134 0 2080 98 0 67 chr10 73817803 73818118 -66498647 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 73818386 73818407 -66498358 + AT_rich Low_complexity Low_complexity 1 21 0 910 226 39 66 chr10 73818679 73819011 -66497754 - L1ME1 LINE L1 -22 6144 5822 2274 119 0 7 chr10 73819026 73819336 -66497429 - AluSx SINE Alu -4 308 1 2251 119 0 7 chr10 73819375 73819685 -66497080 - AluSx SINE Alu 0 312 5 2238 107 0 0 chr10 73819872 73820172 -66496593 - AluY SINE Alu -11 300 1 900 114 0 23 chr10 73820293 73820425 -66496340 - AluSq/x SINE Alu -180 133 5 198 232 80 80 chr10 73821423 73821535 -66495230 - MIR SINE MIR -46 216 105 479 212 54 138 chr10 73821541 73821626 -66495139 - MIR SINE MIR -2 260 169 1778 175 3 23 chr10 73821626 73821935 -66494830 + AluJb SINE Alu 1 303 -9 479 212 54 138 chr10 73821935 73822052 -66494713 - MIR SINE MIR -93 169 75 216 291 36 0 chr10 73822083 73822138 -66494627 - MER91A DNA MER1_type 0 190 134 284 300 71 0 chr10 73822238 73822308 -66494457 - MER91A DNA MER1_type -98 98 24 180 410 12 12 chr10 73822379 73822462 -66494303 - MIR SINE MIR -110 98 16 1099 187 21 0 chr10 73822502 73822689 -66494076 + AluJb SINE Alu 1 191 -121 653 138 0 0 chr10 73822689 73822783 -66493982 - AluSq/x SINE Alu -205 108 15 473 186 31 0 chr10 73822783 73822880 -66493885 + AluJb SINE Alu 203 302 -10 216 253 0 36 chr10 73823017 73823077 -66493688 + MIR SINE MIR 45 103 -105 708 221 55 68 chr10 73823087 73823180 -66493585 + MIR SINE MIR 1 94 -168 2130 126 7 0 chr10 73823180 73823481 -66493284 - AluSq SINE Alu -10 303 1 708 221 55 68 chr10 73823481 73823622 -66493143 + MIR SINE MIR 94 232 -30 1770 158 3 35 chr10 73823873 73824184 -66492581 - AluJo SINE Alu -11 301 1 728 160 8 0 chr10 73824187 73824306 -66492459 - AluJo/FLAM SINE Alu -179 133 14 696 224 0 8 chr10 73824925 73825059 -66491706 + FLAM_A SINE Alu 1 133 0 652 234 37 5 chr10 73825154 73825342 -66491423 - LTR33A LTR ERVL -2 521 328 1152 208 71 25 chr10 73825787 73826153 -66490612 - MER34B LTR ERV1 0 565 183 546 214 10 0 chr10 73826271 73826369 -66490396 - FLAM_A SINE Alu -41 101 3 339 157 41 39 chr10 73826374 73826459 -66490306 - MER34C LTR ERV1 -484 330 34 1705 189 73 32 chr10 73827120 73827559 -66489206 - LTR2B LTR ERV1 0 490 34 1157 179 75 85 chr10 73827665 73828040 -66488725 + MLT1A2 LTR MaLR 4 374 0 1726 192 0 20 chr10 73828082 73828384 -66488381 - AluJo SINE Alu -16 296 1 281 290 189 69 chr10 73828466 73828567 -66488198 - MIR SINE MIR -10 252 164 1646 164 3 72 chr10 73828567 73828885 -66487880 - AluJo SINE Alu -16 296 1 281 290 189 69 chr10 73828885 73829000 -66487765 - MIR SINE MIR -98 164 10 486 222 48 40 chr10 73829073 73829199 -66487566 - MIR3 SINE MIR -10 198 72 236 89 44 0 chr10 73829694 73829739 -66487026 - L1PB3 LINE L1 0 6154 6108 1153 126 72 5 chr10 73829757 73829964 -66486801 - L1PB3 LINE L1 -23 6131 5911 923 147 22 56 chr10 73830166 73830398 -66486367 + L1 LINE L1 3412 3635 -2511 353 314 107 0 chr10 73830693 73830814 -66485951 - L2 LINE L2 -22 3250 3117 1462 213 48 48 chr10 73830876 73831331 -66485434 - MLT1D LTR MaLR -50 455 1 296 301 23 74 chr10 73831353 73831529 -66485236 - L2 LINE L2 -196 3076 2910 226 333 103 43 chr10 73831587 73831821 -66484944 - L2 LINE L2 -461 2853 2606 867 144 8 0 chr10 73833003 73833135 -66483630 + FLAM_C SINE Alu 1 133 0 1794 175 26 3 chr10 73833547 73833850 -66482915 + AluJo SINE Alu 3 312 0 1682 165 25 38 chr10 73833886 73834201 -66482564 - AluJo SINE Alu -1 311 1 336 215 112 0 chr10 73834998 73835105 -66481660 - L1ME1 LINE L1 -39 6127 6009 236 75 0 25 chr10 73835517 73835557 -66481208 + (TTTAA)n Simple_repeat Simple_repeat 3 41 0 777 186 0 0 chr10 73835557 73835681 -66481084 - FLAM_C SINE Alu -19 124 1 260 298 30 69 chr10 73835755 73835886 -66480879 + MIR SINE MIR 49 174 -88 344 213 125 19 chr10 73836671 73836831 -66479934 - HsTC2b DNA Tc2 -3 915 739 760 249 102 45 chr10 73836841 73836889 -66479876 - HsTC2b DNA Tc2 -1538 357 313 1739 162 28 17 chr10 73836889 73837179 -66479586 - AluJo SINE Alu -19 293 1 760 249 102 45 chr10 73837179 73837463 -66479302 - HsTC2b DNA Tc2 -1582 313 6 656 225 16 0 chr10 73837486 73837615 -66479150 - FLAM_A SINE Alu -2 131 1 1425 145 21 25 chr10 73837631 73837913 -66478852 - L1MB8 LINE L1 -2 6176 5896 1313 183 30 12 chr10 73837928 73838256 -66478509 - L1MEc LINE L1 -3090 3125 2792 288 282 43 88 chr10 73838278 73838743 -66478022 - L1MEc LINE L1 -4222 2174 1731 420 227 62 107 chr10 73838895 73839090 -66477675 - L1MEc LINE L1 -4574 1822 1643 3711 68 19 2 chr10 73839090 73839573 -66477192 - L1PA7 LINE L1 -8 6146 5656 420 227 62 107 chr10 73839573 73839668 -66477097 - L1MEc LINE L1 -4753 1643 1545 1229 122 0 15 chr10 73839685 73839882 -66476883 - L1PA8 LINE L1 -1 6171 5978 8701 203 52 14 chr10 73839883 73840448 -66476317 + L1MA4 LINE L1 144 686 -5796 2066 137 0 10 chr10 73840448 73840747 -66476018 + AluSx SINE Alu 1 296 -16 8701 203 52 14 chr10 73840747 73840927 -66475838 + L1MA4 LINE L1 686 858 -5624 1722 186 7 0 chr10 73840927 73841230 -66475535 - AluJb SINE Alu 0 306 2 8701 203 52 14 chr10 73841230 73843917 -66472848 + L1MA4 LINE L1 858 3442 -3040 1864 166 0 20 chr10 73843917 73844219 -66472546 + AluJo SINE Alu 1 296 -16 8701 203 52 14 chr10 73844219 73846573 -66470192 + L1MA4 LINE L1 3442 6191 -291 334 195 103 0 chr10 73846913 73847000 -66469765 + L1MB7 LINE L1 4735 4830 -1316 2304 103 0 0 chr10 73847002 73847302 -66469463 - AluSc SINE Alu -9 300 1 4462 155 52 16 chr10 73847334 73848473 -66468292 + L1MB7 LINE L1 5005 6184 0 360 0 0 0 chr10 73848546 73848586 -66468179 + (TG)n Simple_repeat Simple_repeat 2 41 0 26 0 0 0 chr10 73849086 73849112 -66467653 + AT_rich Low_complexity Low_complexity 1 26 0 2087 121 14 3 chr10 73850405 73850702 -66466063 - AluSq SINE Alu -13 300 1 297 288 183 7 chr10 73854331 73854484 -66462281 + MIR SINE MIR 10 189 -73 2033 116 0 3 chr10 73854497 73854814 -66461951 + AluSx SINE Alu 1 316 0 2305 109 0 0 chr10 73855300 73855603 -66461162 - AluSx SINE Alu -9 303 1 2458 84 7 0 chr10 73855742 73856051 -66460714 - AluSx SINE Alu -1 311 1 1665 153 4 11 chr10 73856388 73856662 -66460103 + AluJo SINE Alu 12 283 -29 325 224 163 41 chr10 73859964 73860062 -66456703 + MIR SINE MIR 12 121 -141 3125 162 13 29 chr10 73860081 73860637 -66456128 - LTR39 LTR ERV1 0 783 237 424 58 58 58 chr10 73860637 73860706 -66456059 - LTR39 LTR ERV1 -665 118 50 2128 103 7 0 chr10 73860932 73861214 -66455551 - AluSx SINE Alu -28 284 1 976 244 228 37 chr10 73861515 73862002 -66454763 - MLT1G1 LTR MaLR -1 594 15 264 216 144 54 chr10 73862004 73862115 -66454650 - MLT1G1-int LTR MaLR -24 1347 1227 31 0 0 0 chr10 73862138 73862169 -66454596 + AT_rich Low_complexity Low_complexity 1 31 0 303 200 16 152 chr10 73862231 73862356 -66454409 - MLT1G1-int LTR MaLR -183 1188 1081 232 268 0 0 chr10 73862603 73862659 -66454106 - MLT1G1-int LTR MaLR -487 884 829 237 333 48 48 chr10 73863104 73863314 -66453451 - MLT1G1-int LTR MaLR -851 520 311 2251 99 0 0 chr10 73863755 73864049 -66452716 + AluSg SINE Alu 1 294 -16 1438 186 68 0 chr10 73864202 73864465 -66452300 + AluJo SINE Alu 9 289 -23 1422 148 43 61 chr10 73864566 73864844 -66451921 - AluJo SINE Alu -18 294 22 323 310 128 22 chr10 73864872 73865098 -66451667 - L1M4 LINE L1 -3240 2906 2657 2042 133 0 7 chr10 73865249 73865563 -66451202 - AluSx SINE Alu 0 312 1 2229 92 0 0 chr10 73865572 73865853 -66450912 - AluSx SINE Alu -12 300 20 259 103 0 0 chr10 73865867 73865906 -66450859 + MADE1 DNA Mariner 37 75 -5 205 250 36 0 chr10 73865993 73866049 -66450716 + MIR SINE MIR 69 126 -136 241 221 35 47 chr10 73866288 73866328 -66450437 - L1ME4a LINE L1 -81 6040 6001 2060 105 0 0 chr10 73866328 73866614 -66450151 - AluSg SINE Alu 0 299 14 241 221 35 47 chr10 73866614 73866658 -66450107 - L1ME4a LINE L1 -120 6001 5956 308 250 142 115 chr10 73866778 73866971 -66449794 - L1ME4a LINE L1 -121 6000 5795 2146 86 62 0 chr10 73866971 73867261 -66449504 - AluSg SINE Alu -2 308 1 308 250 142 115 chr10 73867261 73867363 -66449402 - L1ME4a LINE L1 -326 5795 5697 438 269 46 0 chr10 73867363 73867471 -66449294 - L2 LINE L2 0 3272 3160 733 189 0 23 chr10 73867526 73867658 -66449107 - FLAM_A SINE Alu -4 129 1 339 242 68 93 chr10 73867712 73867873 -66448892 - L1ME4a LINE L1 -2323 5485 5329 1287 178 4 13 chr10 73867999 73868224 -66448541 + Tigger4(Zombi) DNA MER2_type 1 223 -2508 1934 128 10 7 chr10 73868227 73868532 -66448233 + Tigger4(Zombi) DNA MER2_type 2424 2729 -2 1379 143 136 30 chr10 73868878 73869143 -66447622 + AluJo SINE Alu 1 293 -19 1940 164 0 3 chr10 73869704 73870008 -66446757 - AluJb SINE Alu -7 305 3 21 0 0 0 chr10 73870444 73870465 -66446300 + AT_rich Low_complexity Low_complexity 1 21 0 712 231 98 52 chr10 73871659 73872005 -66444760 - L1MC5 LINE L1 -63 7898 7537 513 0 0 0 chr10 73872055 73872112 -66444653 + (TA)n Simple_repeat Simple_repeat 2 58 0 1409 179 79 107 chr10 73872125 73872136 -66444629 - MER69B DNA AcHobo -1427 1099 1089 2005 135 21 7 chr10 73872136 73872424 -66444341 - AluSx SINE Alu -18 294 3 1409 179 79 107 chr10 73872424 73872854 -66443911 - MER69B DNA AcHobo -1437 1089 648 1544 166 12 0 chr10 73872854 73873107 -66443658 - AluJb SINE Alu -56 256 1 1804 157 11 3 chr10 73873115 73873584 -66443181 - AluSx SINE Alu 0 471 1 1409 179 79 107 chr10 73873584 73873663 -66443102 - MER69B DNA AcHobo -1885 641 583 250 240 20 0 chr10 73873757 73873807 -66442958 - L2 LINE L2 0 3272 3222 216 344 53 31 chr10 73873960 73874187 -66442578 - L2 LINE L2 -237 3035 2804 2433 78 0 7 chr10 73874190 73874496 -66442269 - AluSp SINE Alu -8 305 2 707 264 91 81 chr10 73874533 73875017 -66441748 - L2 LINE L2 0 3313 2825 1885 157 126 8 chr10 73876633 73877015 -66439750 - MSTA LTR MaLR -1 427 1 528 298 149 9 chr10 73877182 73877410 -66439355 - MIR SINE MIR 0 262 3 609 325 132 33 chr10 73877453 73877998 -66438767 - L2 LINE L2 -784 2530 1932 240 143 0 0 chr10 73878036 73878078 -66438687 + (TG)n Simple_repeat Simple_repeat 1 42 0 2419 70 13 0 chr10 73878499 73878672 -66438093 - AluSq SINE Alu -5 308 128 270 0 0 0 chr10 73878672 73878702 -66438063 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2419 70 13 0 chr10 73878702 73878830 -66437935 - AluSq SINE Alu -185 128 3 2238 114 3 0 chr10 73880174 73880480 -66436285 - AluSx SINE Alu -1 311 5 2417 94 0 0 chr10 73881489 73881796 -66434969 - AluSx SINE Alu -4 308 2 799 210 105 11 chr10 73883143 73883324 -66433441 - MER58A DNA MER1_type -2 222 25 831 299 98 23 chr10 73883376 73883938 -66432827 + HAL1b LINE L1 198 801 -547 1527 129 36 0 chr10 73883992 73884216 -66432549 + AluSx SINE Alu 58 289 -23 242 233 167 25 chr10 73884224 73884344 -66432421 + HAL1b LINE L1 973 1109 -239 1086 210 94 7 chr10 73884538 73884814 -66431951 + AluJo SINE Alu 2 301 -1 638 200 52 0 chr10 73885671 73885786 -66430979 - FLAM_A SINE Alu -11 122 2 2303 100 0 3 chr10 73886598 73886898 -66429867 + AluSq SINE Alu 3 301 -12 260 255 191 21 chr10 73887660 73887895 -66428870 - L1MC4 LINE L1 0 8042 7768 2217 104 7 3 chr10 73888551 73888850 -66427915 - AluSq SINE Alu -13 300 1 714 182 91 30 chr10 73889845 73890010 -66426755 + L1M4 LINE L1 2687 2861 -3285 2125 88 15 0 chr10 73890032 73890305 -66426460 + AluSx SINE Alu 1 277 -35 267 269 41 68 chr10 73890334 73890553 -66426212 + L1M4 LINE L1 3242 3454 -2692 * 1048 180 20 0 chr10 73890530 73890730 -66426035 + L1MB8 LINE L1 5285 5488 -696 813 185 13 13 chr10 73890733 73890890 -66425875 + AluJb SINE Alu 138 294 -18 2266 166 12 19 chr10 73890891 73891319 -66425446 + L1MB8 LINE L1 5485 5909 -269 1648 155 34 0 chr10 73891822 73892087 -66424678 + AluJo SINE Alu 7 280 -32 2261 85 3 41 chr10 73892228 73892547 -66424218 - AluSq SINE Alu -6 307 1 511 227 14 14 chr10 73893246 73893387 -66423378 - L1MC4 LINE L1 0 8042 7902 317 277 59 0 chr10 73893842 73893943 -66422822 - MIR3 SINE MIR -3 205 99 631 188 141 41 chr10 73894124 73894294 -66422471 - MER5A DNA MER1_type -1 188 2 955 210 36 51 chr10 73894731 73894926 -66421839 + Tigger7 DNA MER2_type 1 192 -541 1375 113 108 4 chr10 73894928 73895159 -66421606 + Tigger7 DNA MER2_type 2330 2584 -3 223 191 319 11 chr10 73895825 73895919 -66420846 - MIR SINE MIR -66 142 20 288 296 0 0 chr10 73896484 73896555 -66420210 + C-rich Low_complexity Low_complexity 4 74 0 2223 105 0 7 chr10 73897077 73897381 -66419384 + AluSx SINE Alu 1 302 -10 567 178 10 10 chr10 73898074 73898175 -66418590 - MER58A DNA MER1_type 0 224 124 481 212 8 76 chr10 73898178 73898296 -66418469 - MER58A DNA MER1_type 0 147 38 321 286 41 27 chr10 73898464 73898611 -66418154 + L1MC5 LINE L1 7744 7892 -69 458 237 8 15 chr10 73899074 73899205 -66417560 + HAL1b LINE L1 665 794 -554 25 65 0 0 chr10 73899482 73899528 -66417237 + AT_rich Low_complexity Low_complexity 1 46 0 216 0 0 0 chr10 73899536 73899560 -66417205 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 750 287 204 10 chr10 73899566 73900019 -66416746 - L2 LINE L2 -12 3301 2764 818 179 6 42 chr10 73900102 73900270 -66416495 - FRAM SINE Alu -3 163 2 925 219 35 27 chr10 73900698 73900954 -66415811 - MIR SINE MIR -4 258 1 243 0 0 0 chr10 73900973 73901000 -66415765 + (TG)n Simple_repeat Simple_repeat 2 28 0 355 345 129 29 chr10 73901003 73901351 -66415414 + L1M4 LINE L1 4630 5012 -1134 29 28 0 0 chr10 73901380 73901416 -66415349 + AT_rich Low_complexity Low_complexity 1 36 0 358 229 107 16 chr10 73902190 73902312 -66414453 + L1ME4a LINE L1 5980 6112 -9 1985 118 31 0 chr10 73902703 73902990 -66413775 - AluSg SINE Alu -14 296 1 392 322 49 7 chr10 73905434 73905577 -66411188 + MIR SINE MIR 17 165 -97 232 246 14 29 chr10 73905656 73905725 -66411040 + MIR SINE MIR 85 152 -110 331 163 0 0 chr10 73905837 73905886 -66410879 + MER94 DNA DNA 12 60 -74 2449 59 0 20 chr10 73905896 73906200 -66410565 - AluSc SINE Alu -11 298 1 1705 123 22 82 chr10 73906371 73906689 -66410076 + AluJo SINE Alu 1 299 -13 269 118 59 0 chr10 73906950 73907001 -66409764 - L1MB7 LINE L1 0 6184 6131 2259 105 0 0 chr10 73907033 73907329 -66409436 - AluSx SINE Alu -16 296 1 2918 225 23 20 chr10 73907409 73907711 -66409054 - L1ME1 LINE L1 -163 6003 5703 2398 76 0 35 chr10 73907711 73908027 -66408738 + AluY SINE Alu 1 305 -6 2918 225 23 20 chr10 73908027 73908466 -66408299 - L1ME1 LINE L1 -463 5703 5260 27 0 0 0 chr10 73908797 73908824 -66407941 + AT_rich Low_complexity Low_complexity 1 27 0 2158 104 17 0 chr10 73909348 73909636 -66407129 - AluSq SINE Alu -20 293 1 719 72 21 10 chr10 73910105 73910202 -66406563 + AluJb SINE Alu 71 168 -144 73 23 0 0 chr10 73910850 73910937 -66405828 + AT_rich Low_complexity Low_complexity 1 87 0 4488 152 50 10 chr10 73911040 73911845 -66404920 - L1MC1 LINE L1 -9 6324 5488 24 67 0 0 chr10 73911907 73911952 -66404813 + AT_rich Low_complexity Low_complexity 1 45 0 1767 160 7 27 chr10 73912009 73912145 -66404620 + AluJb SINE Alu 2 139 -173 2193 131 0 10 chr10 73912145 73912458 -66404307 + AluSx SINE Alu 3 312 0 1767 160 7 27 chr10 73912458 73912614 -66404151 + AluJb SINE Alu 139 288 -24 294 277 126 39 chr10 73912934 73913165 -66403600 + L1M4 LINE L1 4568 4818 -1328 1887 139 20 26 chr10 73913453 73913798 -66402967 + MER7A DNA MER2_type 1 341 -5 2378 166 0 14 chr10 73913996 73914090 -66402675 + MER44D DNA MER2_type 9 103 -2384 2128 120 7 0 chr10 73914090 73914381 -66402384 - AluSx SINE Alu -19 293 1 2378 166 0 14 chr10 73914381 73914713 -66402052 + MER44D DNA MER2_type 103 484 -121 1999 130 0 10 chr10 73915014 73915313 -66401452 - AluSx SINE Alu -16 296 1 933 130 0 0 chr10 73915384 73915522 -66401243 - MER72 LTR ERV1 0 722 585 642 180 25 0 chr10 73915525 73915647 -66401118 + MER44D DNA MER2_type 480 604 -1 1548 236 81 9 chr10 73915681 73916138 -66400627 - MLT1F LTR MaLR -4 538 49 321 185 0 0 chr10 73916139 73916193 -66400572 + Tigger5 DNA MER2_type 2 55 -2268 282 241 0 0 chr10 73916216 73916274 -66400491 + Tigger5 DNA MER2_type 2265 2322 -1 1429 204 52 67 chr10 73916278 73916680 -66400085 - MSTD LTR MaLR 0 396 1 248 250 0 0 chr10 73916680 73916732 -66400033 - MLT1F LTR MaLR -490 52 1 240 149 0 0 chr10 73916759 73916806 -66399959 + (TG)n Simple_repeat Simple_repeat 2 48 0 893 293 169 37 chr10 73916865 73917037 -66399728 - L2 LINE L2 -613 2701 2553 2201 91 17 7 chr10 73917037 73917334 -66399431 + AluSg SINE Alu 1 300 -10 893 293 169 37 chr10 73917334 73917922 -66398843 - L2 LINE L2 -761 2553 1840 297 338 37 7 chr10 73917922 73917948 -66398817 + MIR3 SINE MIR 64 88 -120 1931 103 4 8 chr10 73917948 73918209 -66398556 - AluSq SINE Alu -9 304 45 297 338 37 7 chr10 73918209 73918318 -66398447 + MIR3 SINE MIR 88 203 -5 3282 128 112 38 chr10 73919365 73920042 -66396723 - LTR8A LTR ERV1 0 727 1 1516 236 90 16 chr10 73920480 73921773 -66394992 + L1ME LINE L1 73 1468 -4928 1438 133 51 95 chr10 73921773 73921919 -66394846 + AluJo SINE Alu 1 129 -183 1912 122 15 0 chr10 73921919 73922182 -66394583 + AluSx SINE Alu 30 296 -16 1438 133 51 95 chr10 73922182 73922329 -66394436 + AluJo SINE Alu 129 281 -31 310 212 91 40 chr10 73922336 73922435 -66394330 + L1MCa LINE L1 1464 1567 -4859 700 144 144 0 chr10 73922664 73922803 -66393962 - MLT1B LTR MaLR -228 162 4 2159 115 3 34 chr10 73922815 73923137 -66393628 + AluJb SINE Alu 1 312 0 346 293 0 53 chr10 73923176 73923309 -66393456 + MIR SINE MIR 118 243 -19 1424 144 93 12 chr10 73924258 73924515 -66392250 + AluSg1 SINE Alu 1 278 -31 382 149 0 15 chr10 73925089 73925156 -66391609 - MER1B DNA MER1_type 0 339 274 945 242 23 9 chr10 73925167 73925386 -66391379 + MER58A DNA MER1_type 3 224 0 2034 146 13 3 chr10 73925418 73925720 -66391045 + AluSx SINE Alu 1 305 -7 1696 178 10 24 chr10 73925756 73926048 -66390717 + AluJo SINE Alu 3 290 -22 737 226 43 16 chr10 73926114 73926371 -66390394 + L1MCa LINE L1 2359 2622 -3985 * 1207 186 141 66 chr10 73926368 73926836 -66389929 + L1ME2 LINE L1 5656 6158 -8 1650 150 26 36 chr10 73927111 73927417 -66389348 + AluJb SINE Alu 1 303 -9 1019 175 0 12 chr10 73927419 73927579 -66389186 - FRAM SINE Alu -27 149 1 479 293 98 58 chr10 73927615 73927709 -66389056 - MIR SINE MIR -30 232 143 2244 108 0 0 chr10 73927709 73927997 -66388768 - AluSc SINE Alu -21 288 1 479 293 98 58 chr10 73927997 73928107 -66388658 - MIR SINE MIR -119 143 20 25 51 0 0 chr10 73928149 73928188 -66388577 + AT_rich Low_complexity Low_complexity 1 39 0 4514 124 52 7 chr10 73928457 73929148 -66387617 - MER72 LTR ERV1 0 722 1 27 62 0 0 chr10 73930238 73930286 -66386479 + AT_rich Low_complexity Low_complexity 1 48 0 372 200 48 0 chr10 73930304 73930409 -66386356 - L1MC4 LINE L1 0 8042 7933 1705 173 26 29 chr10 73931472 73931785 -66384980 - AluJo SINE Alu 0 312 1 334 200 0 0 chr10 73931811 73931876 -66384889 + MER96B DNA MER1_type? 29 93 -324 552 123 47 38 chr10 73931883 73931989 -66384776 - AluJb SINE Alu -8 304 198 1033 207 0 65 chr10 73932023 73932255 -66384510 - AluSx SINE Alu -94 218 2 651 179 55 7 chr10 73932255 73932400 -66384365 + MER96B DNA MER1_type? 82 233 -184 2600 50 0 0 chr10 73932441 73932740 -66384025 - AluY SINE Alu -12 299 1 2026 123 32 41 chr10 73932848 73933188 -66383577 - MER1B DNA MER1_type 0 337 1 753 127 0 95 chr10 73933236 73933394 -66383371 + FLAM_C SINE Alu 1 143 0 3488 125 49 45 chr10 73933974 73934079 -66382686 + Tigger2 DNA MER2_type 103 206 -2512 2195 110 3 0 chr10 73934079 73934371 -66382394 - AluSx SINE Alu -15 297 5 3488 125 49 45 chr10 73934371 73934914 -66381851 + Tigger2 DNA MER2_type 206 754 -1964 1005 122 181 18 chr10 73934972 73935193 -66381572 + Tigger2 DNA MER2_type 2462 2718 0 1380 124 15 5 chr10 73936011 73936213 -66380552 - AluJb SINE Alu -23 289 86 2495 77 0 3 chr10 73936224 73936536 -66380229 - AluY SINE Alu 0 311 1 1851 112 81 0 chr10 73936860 73937145 -66379620 - AluSg SINE Alu -2 308 1 251 219 193 44 chr10 73937248 73937366 -66379399 + MIR SINE MIR 7 131 -77 185 208 151 0 chr10 73937487 73937540 -66379225 - L2 LINE L2 -3 3269 3209 2481 70 0 7 chr10 73938031 73938333 -66378432 + AluY SINE Alu 1 300 -11 1973 149 0 10 chr10 73938726 73939027 -66377738 + AluJb SINE Alu 1 298 -14 1015 193 69 78 chr10 73939664 73939762 -66377003 - MER2 DNA MER2_type 0 345 248 2215 109 7 10 chr10 73939762 73940066 -66376699 + AluSx SINE Alu 1 303 -9 1015 193 69 78 chr10 73940066 73940315 -66376450 - MER2 DNA MER2_type -97 248 1 241 217 187 74 chr10 73940370 73940573 -66376192 + L1ME4a LINE L1 5882 6107 -14 2451 59 0 13 chr10 73940738 73941041 -66375724 - AluY SINE Alu -12 299 1 1850 157 11 0 chr10 73941372 73941659 -66375106 - AluJo SINE Alu -22 290 1 272 349 85 31 chr10 73942168 73942297 -66374468 - L2 LINE L2 -28 3244 3109 5151 138 31 38 chr10 73942589 73943464 -66373301 - L1MA4 LINE L1 -1 6299 5440 2585 61 0 10 chr10 73943464 73943777 -66372988 - AluY SINE Alu -1 310 1 5151 138 31 38 chr10 73943777 73944657 -66372108 - L1MA4 LINE L1 -860 5440 4555 573 284 67 34 chr10 73945415 73945654 -66371111 - MIR SINE MIR -14 248 2 581 212 187 25 chr10 73946344 73946547 -66370218 + MER106A DNA MER1_type 1 236 0 237 349 223 21 chr10 73946548 73947318 -66369447 + L2 LINE L2 719 1644 -1670 1799 185 10 3 chr10 73947381 73947679 -66369086 - AluJb SINE Alu -12 300 1 213 186 70 0 chr10 73947695 73947738 -66369027 + L2 LINE L2 3216 3261 -11 1253 278 77 38 chr10 73948493 73948571 -66368194 + L1ME3A LINE L1 600 673 -5637 1850 171 7 13 chr10 73948571 73948880 -66367885 - AluJb SINE Alu -5 307 1 1253 278 77 38 chr10 73948880 73949441 -66367324 + L1ME3A LINE L1 673 1347 -4963 2183 134 3 0 chr10 73949441 73949746 -66367019 + AluSx SINE Alu 1 306 -6 1253 278 77 38 chr10 73949746 73950127 -66366638 + L1ME3A LINE L1 1347 1712 -4598 2182 129 0 7 chr10 73950223 73950525 -66366240 + AluSx SINE Alu 1 300 -12 591 281 63 12 chr10 73950621 73950874 -66365891 + L1ME3A LINE L1 4084 4349 -1780 1773 235 88 72 chr10 73950993 73951305 -66365460 + L1ME3A LINE L1 4532 4838 -1315 1575 191 24 10 chr10 73951305 73951603 -66365162 + AluJo SINE Alu 1 302 -10 1773 235 88 72 chr10 73951603 73951867 -66364898 + L1ME3A LINE L1 4838 5096 -1057 708 182 41 0 chr10 73951867 73951988 -66364777 + FLAM_A SINE Alu 1 126 -7 1773 235 88 72 chr10 73951988 73952259 -66364506 + L1ME3A LINE L1 5096 5361 -792 2905 143 21 15 chr10 73952259 73952407 -66364358 + L1MB8 LINE L1 5642 5788 -390 8460 66 3 1 chr10 73952407 73953476 -66363289 + MER11C LTR ERVK 1 1071 0 2905 143 21 15 chr10 73953476 73953852 -66362913 + L1MB8 LINE L1 5788 6169 -9 1773 235 88 72 chr10 73953852 73954570 -66362195 + L1ME3A LINE L1 5361 6125 -28 292 265 61 60 chr10 73955612 73955788 -66360977 + MER5B DNA MER1_type 3 189 0 2561 131 136 0 chr10 73958778 73959206 -66357559 + LTR19A LTR ERV1 1 486 0 1277 112 162 0 chr10 73959369 73959566 -66357199 + MER30 DNA MER1_type 1 229 -1 4482 149 83 6 chr10 73959577 73960407 -66356358 + L1MB3 LINE L1 5290 6183 0 595 159 167 0 chr10 73960518 73960656 -66356109 + MER5A DNA MER1_type 5 165 -24 184 216 0 0 chr10 73960660 73960697 -66356068 - MIR SINE MIR -61 147 111 1996 127 0 0 chr10 73961135 73961410 -66355355 + AluSx SINE Alu 21 295 -17 404 256 179 23 chr10 73961443 73961705 -66355060 + L2 LINE L2 1962 2264 -1050 601 254 107 42 chr10 73961846 73961992 -66354773 + L1MC5 LINE L1 7348 7483 -478 180 0 0 0 chr10 73961992 73962012 -66354753 + (TA)n Simple_repeat Simple_repeat 2 21 0 2105 117 7 3 chr10 73962012 73962302 -66354463 - AluSx SINE Alu -21 291 1 601 254 107 42 chr10 73962302 73962539 -66354226 + L1MC5 LINE L1 7482 7757 -204 2416 69 0 3 chr10 73963101 73963391 -66353374 + AluY SINE Alu 3 291 -20 2203 104 3 32 chr10 73965056 73965372 -66351393 + AluSx SINE Alu 1 307 -5 1202 122 66 81 chr10 73965383 73965654 -66351111 + L1MC3 LINE L1 7498 7764 -21 302 303 0 28 chr10 73965941 73966050 -66350715 + GA-rich Low_complexity Low_complexity 2 107 0 23 33 0 0 chr10 73966485 73966515 -66350250 + AT_rich Low_complexity Low_complexity 1 30 0 2265 119 0 0 chr10 73967472 73967783 -66348982 - AluSx SINE Alu -1 311 1 651 277 174 66 chr10 73968094 73968461 -66348304 - L3 LINE CR1 -44 1533 1099 1746 169 3 14 chr10 73968461 73968751 -66348014 + AluJb SINE Alu 1 287 -25 651 277 174 66 chr10 73968751 73968870 -66347895 - L3 LINE CR1 -478 1099 994 2274 113 0 3 chr10 73969774 73970084 -66346681 + AluSg SINE Alu 1 309 -1 631 0 25 0 chr10 73970151 73970230 -66346535 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 694 176 0 0 chr10 73970635 73970743 -66346022 + FLAM_A SINE Alu 1 108 -34 789 190 139 44 chr10 73971137 73971252 -66345513 + MER33 DNA MER1_type 2 105 -2480 1605 210 0 0 chr10 73971252 73971533 -66345232 + AluJo SINE Alu 8 288 -24 789 190 139 44 chr10 73971533 73971712 -66345053 + MER33 DNA MER1_type 105 324 0 659 176 10 0 chr10 73972066 73972191 -66344574 - AluJb SINE Alu 0 307 182 1425 173 50 32 chr10 73972221 73972498 -66344267 + AluJo SINE Alu 1 282 -30 234 0 0 0 chr10 73972501 73972527 -66344238 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 240 242 110 92 chr10 73972767 73972987 -66343778 - L1MC4a LINE L1 -1630 6178 5950 2304 148 22 27 chr10 73972987 73973353 -66343412 - THE1B LTR MaLR 0 364 1 240 242 110 92 chr10 73973353 73973413 -66343352 - L1MC4a LINE L1 -1858 5950 5893 40 21 0 0 chr10 73973553 73973600 -66343165 + AT_rich Low_complexity Low_complexity 1 47 0 2385 106 0 6 chr10 73973676 73973987 -66342778 - AluSq SINE Alu -4 309 1 409 220 202 63 chr10 73974282 73974360 -66342405 - MLT1J LTR MaLR -31 480 414 1732 174 149 41 chr10 73974360 73974570 -66342195 + LTR2B LTR ERV1 1 187 -303 186 43 0 0 chr10 73974570 73974593 -66342172 + (TTCTG)n Simple_repeat Simple_repeat 1 23 0 1732 174 149 41 chr10 73974593 73974824 -66341941 + LTR2B LTR ERV1 187 490 0 409 220 202 63 chr10 73974824 73974968 -66341797 - MLT1J LTR MaLR -97 414 227 318 218 56 95 chr10 73974980 73975159 -66341606 - L1MEd LINE L1 -5166 953 782 1962 160 76 44 chr10 73975286 73975648 -66341117 - MSTB1 LTR MaLR -12 420 42 2219 102 14 0 chr10 73975648 73975941 -66340824 + AluSx SINE Alu 1 297 -15 1962 160 76 44 chr10 73975941 73975985 -66340780 - MSTB1 LTR MaLR -390 42 1 603 312 71 25 chr10 73975985 73976379 -66340386 - L1MEd LINE L1 -5471 648 237 1866 159 7 20 chr10 73977444 73977740 -66339025 + AluJo SINE Alu 1 292 -20 497 216 183 20 chr10 73977756 73977909 -66338856 - MER5A DNA MER1_type -2 187 10 277 315 42 28 chr10 73977954 73978097 -66338668 - MER5A DNA MER1_type -2 187 43 224 304 61 43 chr10 73978011 73978126 -66338639 + MER5A DNA MER1_type 73 189 0 * 2166 113 3 0 chr10 73978420 73978711 -66338054 + AluSx SINE Alu 1 292 -20 1515 120 19 100 chr10 73979392 73979577 -66337188 - L1PA16 LINE L1 -8 6158 6006 1985 152 3 3 chr10 73979577 73979879 -66336886 - AluJb SINE Alu -10 302 1 1515 120 19 100 chr10 73979879 73980002 -66336763 - L1PA16 LINE L1 -160 6006 5875 1583 126 4 9 chr10 73980065 73980296 -66336469 - AluY SINE Alu -20 291 62 640 119 50 0 chr10 73980299 73980400 -66336365 - AluSq/x SINE Alu -206 107 2 389 294 0 0 chr10 73980580 73980682 -66336083 - MIR3 SINE MIR -21 187 86 1132 69 0 0 chr10 73980830 73980961 -66335804 + AluY SINE Alu 1 131 -180 924 167 42 0 chr10 73981208 73981376 -66335389 - MER58B DNA MER1_type 0 341 167 532 176 10 0 chr10 73981858 73981960 -66334805 + L1MC3 LINE L1 7330 7432 -353 206 277 15 46 chr10 73982012 73982077 -66334688 - L2 LINE L2 -8 3264 3202 2279 107 10 7 chr10 73982718 73983028 -66333737 - AluSx SINE Alu -1 311 1 199 189 0 0 chr10 73983060 73983097 -66333668 - L2 LINE L2 0 3313 3277 232 208 0 19 chr10 73984064 73984117 -66332648 - L2 LINE L2 -2 3270 3219 2243 104 13 10 chr10 73985325 73985623 -66331142 - AluSq SINE Alu -14 299 1 2798 214 56 43 chr10 73985779 73986424 -66330341 + MER82 DNA MER2_type 1 653 0 6979 72 47 3 chr10 73986622 73987770 -66328995 - L1PA12 LINE L1 -3 7603 6440 471 113 0 0 chr10 73988427 73988507 -66328258 + (CAT)n Simple_repeat Simple_repeat 3 82 0 20917 186 39 16 chr10 73989089 73992120 -66324645 - L1PA12 LINE L1 -1131 6453 3494 2335 104 10 0 chr10 73992120 73992429 -66324336 - AluSx SINE Alu 0 312 1 20917 186 39 16 chr10 73992429 73993328 -66323437 - L1PA12 LINE L1 -4090 3494 2617 1967 134 7 26 chr10 73993328 73993634 -66323131 - AluSq SINE Alu -13 300 1 20917 186 39 16 chr10 73993634 73994486 -66322279 - L1PA12 LINE L1 -4967 2617 747 264 322 31 106 chr10 73995227 73995287 -66321478 - L2 LINE L2 -803 2511 2448 2412 82 3 13 chr10 73995287 73995593 -66321172 + AluSq SINE Alu 1 303 -10 264 322 31 106 chr10 73995593 73995852 -66320913 - L2 LINE L2 -866 2448 2216 207 292 125 14 chr10 73995891 73996035 -66320730 - L2 LINE L2 -1429 1885 1726 1755 154 22 0 chr10 73996092 73996364 -66320401 - AluJb SINE Alu -34 278 1 196 308 13 39 chr10 73996753 73996831 -66319934 + MER5B DNA MER1_type 1 76 -102 * 266 337 74 20 chr10 73996819 73997021 -66319744 + L2 LINE L2 2546 2758 -556 445 239 50 63 chr10 73997299 73997459 -66319306 - L1MA10 LINE L1 0 6164 6008 216 0 0 0 chr10 73997583 73997607 -66319158 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 2080 128 0 3 chr10 73997609 73997897 -66318868 - AluSx SINE Alu -25 287 1 456 302 98 9 chr10 73998128 73998343 -66318422 + L2 LINE L2 2821 3054 -218 183 286 20 0 chr10 73998392 73998441 -66318324 + L2 LINE L2 3262 3311 -2 302 339 55 28 chr10 73999043 73999152 -66317613 + L2 LINE L2 3149 3260 -12 1936 133 29 16 chr10 73999379 73999687 -66317078 + AluJo SINE Alu 1 312 0 606 153 0 31 chr10 73999934 74000032 -66316733 - AluSg/x SINE Alu -81 231 137 1423 149 116 11 chr10 74000032 74000300 -66316465 - AluSg SINE Alu -14 296 1 336 315 114 45 chr10 74001487 74001714 -66315051 + L1MC/D LINE L1 5414 5672 -506 1504 157 20 4 chr10 74001714 74001963 -66314802 + AluJo SINE Alu 49 301 -11 336 315 114 45 chr10 74001963 74002043 -66314722 + L1MC/D LINE L1 5672 5745 -433 500 268 106 35 chr10 74002581 74002779 -66313986 + MIR SINE MIR 51 262 0 2311 116 3 0 chr10 74003525 74003836 -66312929 - AluSx SINE Alu 0 312 1 1594 157 46 25 chr10 74004204 74004484 -66312281 + AluJo SINE Alu 3 288 -24 777 215 53 75 chr10 74004587 74004764 -66312001 - MER58A DNA MER1_type -2197 223 48 2290 92 0 0 chr10 74004764 74005082 -66311683 + AluSx SINE Alu 1 318 0 777 215 53 75 chr10 74005082 74005129 -66311636 - MER58A DNA MER1_type -2372 48 1 248 266 375 8 chr10 74005138 74005266 -66311499 - MER5B DNA MER1_type -1 177 3 287 340 60 84 chr10 74006600 74006885 -66309880 - L2 LINE L2 0 3272 2995 2257 105 23 18 chr10 74006886 74007229 -66309536 + L1MB7 LINE L1 5821 6165 -19 4979 201 54 37 chr10 74007235 74007376 -66309389 + L1MB8 LINE L1 3198 3335 -2843 2434 55 3 35 chr10 74007376 74007686 -66309079 + AluY SINE Alu 1 300 -11 4979 201 54 37 chr10 74007686 74008309 -66308456 + L1MB8 LINE L1 3335 3946 -2232 2045 107 72 0 chr10 74008309 74008600 -66308165 + AluSq SINE Alu 1 312 -1 4979 201 54 37 chr10 74008600 74009709 -66307056 + L1MB8 LINE L1 3946 6172 -6 986 169 20 3 chr10 74009783 74010189 -66306576 + ALR/Alpha Satellite centromeric 1 412 -45 210 297 51 36 chr10 74010219 74010357 -66306408 - L2 LINE L2 -470 2844 2705 1468 144 156 0 chr10 74010887 74011137 -66305628 + AluJb SINE Alu 2 290 -22 330 344 111 16 chr10 74011156 74011400 -66305365 + L3b LINE CR1 1241 1507 -76 270 56 0 0 chr10 74012265 74012301 -66304464 + (TG)n Simple_repeat Simple_repeat 2 37 0 1162 91 0 0 chr10 74012461 74012604 -66304161 + AluSq/x SINE Alu 3 145 -168 351 0 0 0 chr10 74012607 74012646 -66304119 + (TG)n Simple_repeat Simple_repeat 1 39 0 180 0 0 0 chr10 74013337 74013357 -66303408 + (ATG)n Simple_repeat Simple_repeat 1 20 0 2439 82 0 0 chr10 74013426 74013719 -66303046 - AluSx SINE Alu -15 297 5 347 282 74 37 chr10 74014154 74014317 -66302448 - MIR SINE MIR -80 182 14 691 138 24 30 chr10 74014410 74014577 -66302188 + CT-rich Low_complexity Low_complexity 3 168 0 24 0 0 0 chr10 74014588 74014612 -66302153 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 74014707 74014729 -66302036 + AT_rich Low_complexity Low_complexity 1 22 0 569 258 29 73 chr10 74014820 74015095 -66301670 - L1M4 LINE L1 -1428 4718 4456 1252 246 91 35 chr10 74015141 74015571 -66301194 - MLT1J LTR MaLR -57 454 1 1494 244 134 38 chr10 74015616 74016092 -66300673 + MLT1F LTR MaLR 15 536 -6 2277 109 0 0 chr10 74016113 74016407 -66300358 - AluSx SINE Alu -18 294 1 1009 174 36 5 chr10 74016445 74016641 -66300124 - L1MB7 LINE L1 -8 6176 5975 3803 152 39 1 chr10 74016644 74017358 -66299407 - L1MB7 LINE L1 -255 5929 5180 1634 202 0 25 chr10 74017367 74017684 -66299081 - AluJo SINE Alu -3 309 1 1695 185 6 10 chr10 74017686 74017999 -66298766 - AluJo SINE Alu 0 312 1 912 158 66 0 chr10 74018010 74018162 -66298603 - L1MB5 LINE L1 -8 6166 6005 855 181 18 23 chr10 74018162 74018333 -66298432 - MLT1A1 LTR MaLR 0 365 196 1735 102 0 4 chr10 74018399 74018635 -66298130 - AluSq SINE Alu -78 235 1 466 174 61 10 chr10 74019086 74019184 -66297581 + MER58 DNA MER1_type 152 254 -2166 236 327 20 10 chr10 74019191 74019292 -66297473 + L1M4 LINE L1 5067 5168 -978 615 118 0 11 chr10 74019573 74019666 -66297099 + L1PA10 LINE L1 6076 6167 -1 440 314 34 24 chr10 74019675 74019968 -66296797 - L1MC/D LINE L1 -2258 5550 5255 2244 86 9 19 chr10 74020155 74020470 -66296295 + AluSx SINE Alu 1 312 0 481 179 8 98 chr10 74020616 74020739 -66296026 - MER81 DNA DNA 0 114 3 2064 85 4 0 chr10 74020921 74021216 -66295549 - AluSx SINE Alu 0 319 24 455 201 97 65 chr10 74021581 74021735 -66295030 - MIR SINE MIR -55 207 49 328 294 28 28 chr10 74021783 74021892 -66294873 + MER5A DNA MER1_type 54 162 -27 2441 82 0 7 chr10 74021912 74022218 -66294547 - AluY SINE Alu -7 304 1 611 237 90 0 chr10 74022477 74022633 -66294132 - MER5B DNA MER1_type -8 170 1 1225 150 5 10 chr10 74022675 74022882 -66293883 + AluJo SINE Alu 6 211 -101 379 194 43 0 chr10 74022885 74022978 -66293787 + MER5A DNA MER1_type 92 188 -1 967 180 16 16 chr10 74024641 74024830 -66291935 - MER53 DNA DNA 0 189 1 2156 114 0 0 chr10 74026098 74026388 -66290377 + AluSq SINE Alu 1 290 -23 226 289 0 0 chr10 74026644 74026696 -66290069 + (CA)n Simple_repeat Simple_repeat 1 52 0 247 310 86 9 chr10 74026696 74026812 -66289953 - MIR SINE MIR -77 185 61 2147 160 50 40 chr10 74026815 74026918 -66289847 - MER45R DNA AcHobo 0 1581 1481 2310 92 0 7 chr10 74026918 74027213 -66289552 + AluSx SINE Alu 1 293 -19 2147 160 50 40 chr10 74027213 74027584 -66289181 - MER45R DNA AcHobo -100 1481 1102 2273 135 44 44 chr10 74027619 74028425 -66288340 - L1MB4 LINE L1 -6 6174 5264 1861 154 0 3 chr10 74028425 74028710 -66288055 + AluJb SINE Alu 1 284 -28 2273 135 44 44 chr10 74028710 74028983 -66287782 - L1MB4 LINE L1 -916 5264 4992 1680 167 7 14 chr10 74029000 74029288 -66287477 + AluJo SINE Alu 1 286 -26 2178 122 0 34 chr10 74029366 74029686 -66287079 - AluSx SINE Alu -3 309 1 198 366 0 0 chr10 74029686 74029768 -66286997 - L3 LINE CR1 -2 1575 1494 681 139 52 9 chr10 74029865 74029980 -66286785 - AluJb SINE Alu -4 308 189 451 192 50 0 chr10 74030698 74030797 -66285968 - MER5B DNA MER1_type -2 176 73 1123 195 76 8 chr10 74030798 74031049 -66285716 - L1M4 LINE L1 -1144 5002 4735 15912 169 77 34 chr10 74031059 74031572 -66285193 - L1MA2 LINE L1 0 7723 7234 432 0 0 0 chr10 74031572 74031620 -66285145 + (TA)n Simple_repeat Simple_repeat 1 48 0 15912 169 77 34 chr10 74031620 74032242 -66284523 - L1MA2 LINE L1 -489 7234 6640 180 0 0 0 chr10 74032242 74032262 -66284503 + (TTG)n Simple_repeat Simple_repeat 2 21 0 15912 169 77 34 chr10 74032262 74035010 -66281755 - L1MA2 LINE L1 -1083 6640 4012 2098 121 0 7 chr10 74035010 74035299 -66281466 + AluSx SINE Alu 7 293 -19 15912 169 77 34 chr10 74035299 74035665 -66281100 - L1MA2 LINE L1 -3711 4012 3663 2213 137 0 0 chr10 74035665 74035971 -66280794 - AluSx SINE Alu -6 306 1 15912 169 77 34 chr10 74035971 74036324 -66280441 - L1MA2 LINE L1 -4060 3663 3327 1556 201 0 18 chr10 74036324 74036607 -66280158 - AluJb SINE Alu -34 278 1 15912 169 77 34 chr10 74036607 74038831 -66277934 - L1MA2 LINE L1 -4396 3327 295 1877 140 17 10 chr10 74038831 74039123 -66277642 + AluJb SINE Alu 1 294 -18 15912 169 77 34 chr10 74039123 74039419 -66277346 - L1MA2 LINE L1 -7428 295 13 2114 146 0 0 chr10 74039436 74039745 -66277020 - AluSx SINE Alu -2 310 2 3723 218 14 30 chr10 74039756 74040053 -66276712 - L1M4 LINE L1 -1408 4738 4438 2462 90 0 0 chr10 74040053 74040363 -66276402 + AluY SINE Alu 2 311 0 3723 218 14 30 chr10 74040363 74040552 -66276213 - L1M4 LINE L1 -1708 4438 4248 216 67 0 0 chr10 74040552 74040582 -66276183 + (TG)n Simple_repeat Simple_repeat 1 30 0 3723 218 14 30 chr10 74040582 74041002 -66275763 - L1M4 LINE L1 -1898 4248 3845 2047 133 3 0 chr10 74041002 74041302 -66275463 - AluSx SINE Alu -11 301 1 288 296 0 0 chr10 74041824 74041895 -66274870 + G-rich Low_complexity Low_complexity 4 74 0 227 191 319 11 chr10 74042460 74042554 -66274211 + MIR SINE MIR 20 142 -66 180 226 0 0 chr10 74043186 74043217 -66273548 + L2 LINE L2 3193 3223 -90 1421 113 108 4 chr10 74043220 74043451 -66273314 - Tigger7 DNA MER2_type -3 2484 2230 967 205 36 51 chr10 74043453 74043648 -66273117 - Tigger7 DNA MER2_type -513 192 1 701 188 141 41 chr10 74044085 74044255 -66272510 + MER5A DNA MER1_type 2 188 -1 309 277 59 0 chr10 74044436 74044537 -66272228 + MIR3 SINE MIR 99 205 -3 231 261 70 52 chr10 74044870 74044985 -66271780 + L1MC4 LINE L1 7802 7918 -124 538 227 14 14 chr10 74044992 74045133 -66271632 + L1MC4 LINE L1 7902 8042 0 1927 69 11 47 chr10 74045832 74046106 -66270659 + AluSq SINE Alu 1 264 -49 535 302 69 14 chr10 74046295 74046570 -66270195 + L1M4 LINE L1 4804 5093 -1053 822 184 138 0 chr10 74046572 74046724 -66270041 + AluSg/x SINE Alu 126 298 -12 2018 149 10 0 chr10 74047612 74047907 -66268858 - AluSx SINE Alu -14 298 1 211 204 0 61 chr10 74047952 74048001 -66268764 + MIR SINE MIR 21 66 -142 818 184 147 0 chr10 74048001 74048164 -66268601 + MER45 DNA AcHobo 1 187 -853 392 134 9 143 chr10 74048264 74048335 -66268430 + L1M4c LINE L1 1507 1560 -4824 2073 131 0 0 chr10 74048335 74048651 -66268114 - AluSx SINE Alu 0 316 1 392 134 9 143 chr10 74048651 74048690 -66268075 + L1M4c LINE L1 1560 1603 -4781 22 0 0 0 chr10 74048741 74048763 -66268002 + AT_rich Low_complexity Low_complexity 1 22 0 2290 196 60 26 chr10 74048763 74049935 -66266830 + L1M4c LINE L1 1598 2867 -3515 28 0 0 0 chr10 74050046 74050074 -66266691 + GC_rich Low_complexity Low_complexity 1 28 0 341 211 117 99 chr10 74050080 74050293 -66266472 - L1M2 LINE L1 -5587 1262 1046 252 59 0 0 chr10 74050313 74050347 -66266418 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 351 0 0 0 chr10 74050751 74050790 -66265975 + (CA)n Simple_repeat Simple_repeat 2 40 0 1435 109 0 19 chr10 74050871 74051082 -66265683 - AluSp SINE Alu -9 304 98 1022 209 60 52 chr10 74051298 74051666 -66265099 + L1MC5 LINE L1 6876 7245 -728 466 233 137 46 chr10 74051777 74052039 -66264726 + L1MC5 LINE L1 7260 7545 -416 1032 171 0 17 chr10 74052156 74052332 -66264433 + FRAM SINE Alu 1 165 -11 1427 178 0 0 chr10 74052345 74052575 -66264190 + AluJo SINE Alu 64 293 -19 545 249 38 45 chr10 74052576 74052819 -66263946 + L1MC5 LINE L1 7690 8041 -1 649 161 0 0 chr10 74053055 74053148 -66263617 - FLAM_A SINE Alu -28 114 22 529 261 25 0 chr10 74053149 74053310 -66263455 + L1M4c LINE L1 3432 3596 -2786 874 150 0 7 chr10 74053322 74053462 -66263303 - FLAM_C SINE Alu -2 141 3 1162 226 75 35 chr10 74053464 74053862 -66262903 + L1M4c LINE L1 3575 3988 -2394 2180 122 0 6 chr10 74053862 74054174 -66262591 + AluSx SINE Alu 1 310 -2 346 281 68 20 chr10 74054327 74054473 -66262292 - L1MC4a LINE L1 -1888 5920 5768 1546 204 13 56 chr10 74054480 74054853 -66261912 - LTR47B LTR ERVL -86 357 1 418 180 0 120 chr10 74054853 74054990 -66261775 - MER4B-int LTR ERV1 -2538 4220 4068 2031 118 26 3 chr10 74054990 74055295 -66261470 - AluSx SINE Alu 0 312 1 418 180 0 120 chr10 74055295 74055307 -66261458 - MER4B-int LTR ERV1 -2690 4068 1179 392 252 58 58 chr10 74055431 74055592 -66261173 - L1MEd LINE L1 -4868 1251 1088 2360 91 0 7 chr10 74055592 74055900 -66260865 - AluY SINE Alu -5 306 1 392 252 58 58 chr10 74055900 74055964 -66260801 - L1MEd LINE L1 -5030 1089 1026 304 256 19 51 chr10 74056101 74056257 -66260508 + CT-rich Low_complexity Low_complexity 5 155 0 189 74 0 0 chr10 74056438 74056465 -66260300 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 2008 132 4 0 chr10 74056467 74056748 -66260017 - AluJb SINE Alu -30 282 1 423 0 0 0 chr10 74057149 74057196 -66259569 + (TA)n Simple_repeat Simple_repeat 1 47 0 2025 147 0 3 chr10 74058024 74058316 -66258449 + AluJb SINE Alu 1 291 -21 321 143 0 0 chr10 74058598 74058647 -66258118 + L1MB7 LINE L1 6117 6165 -19 342 310 138 37 chr10 74058693 74059019 -66257746 + L2 LINE L2 968 1326 -1988 487 291 116 29 chr10 74059125 74059366 -66257399 + L2 LINE L2 1821 2082 -1232 209 316 158 46 chr10 74059421 74059573 -66257192 + L2 LINE L2 2897 3065 -207 1111 199 31 10 chr10 74060486 74060777 -66255988 + L1M4 LINE L1 4903 5199 -947 1648 177 28 14 chr10 74060783 74061071 -66255694 + AluJo SINE Alu 5 296 -16 1453 148 46 13 chr10 74061115 74061418 -66255347 - L1MB4 LINE L1 0 6416 6104 2302 87 10 0 chr10 74061763 74062061 -66254704 + AluSx SINE Alu 1 301 -11 1857 165 0 29 chr10 74062368 74062683 -66254082 + AluJo SINE Alu 1 306 -6 2129 92 20 20 chr10 74062931 74063237 -66253528 + AluY SINE Alu 1 306 -5 1618 167 49 24 chr10 74063240 74063527 -66253238 - AluJo SINE Alu -18 294 1 2820 10 0 6 chr10 74063612 74063925 -66252840 + AluYa5 SINE Alu 1 311 0 1424 116 55 0 chr10 74064260 74064459 -66252306 - AluSx SINE Alu -102 210 1 1267 120 41 29 chr10 74064559 74064801 -66251964 - L1MB7 LINE L1 -10 6174 5930 2085 151 23 3 chr10 74064801 74065185 -66251580 - L1MB4 LINE L1 -473 5947 5556 1187 213 8 35 chr10 74065197 74065451 -66251314 + AluJo SINE Alu 1 247 -65 2149 109 3 14 chr10 74065467 74065761 -66251004 - AluSx SINE Alu -21 291 1 415 169 169 8 chr10 74065765 74065889 -66250876 - L1MB4 LINE L1 -905 5477 5334 214 222 0 0 chr10 74066046 74066091 -66250674 - MIR SINE MIR 0 262 218 324 213 147 40 chr10 74066268 74066373 -66250392 - L1MB4 LINE L1 -3940 2444 2352 1526 188 54 0 chr10 74066373 74066650 -66250115 - AluJb SINE Alu -19 293 2 324 213 147 40 chr10 74066650 74066817 -66249948 - L1MB4 LINE L1 -4032 2352 2143 * 756 192 154 46 chr10 74066816 74067186 -66249579 - L1MB4 LINE L1 -4780 1523 781 1605 160 97 9 chr10 74068274 74068593 -66248172 + MER7A DNA MER2_type 1 345 -1 1925 165 3 3 chr10 74069188 74069491 -66247274 - AluJo SINE Alu -9 303 1 2193 118 0 3 chr10 74069759 74070056 -66246709 - AluSx SINE Alu -16 296 1 325 218 81 0 chr10 74070193 74070280 -66246485 - L1M4 LINE L1 -2982 3164 3071 1152 202 35 7 chr10 74070281 74070568 -66246197 - L1MB8 LINE L1 -6 6172 5878 301 245 61 0 chr10 74070608 74070706 -66246059 - L1M4 LINE L1 -3059 3087 2984 348 309 59 48 chr10 74070882 74071124 -66245641 - HAL1b LINE L1 -715 633 382 2191 114 7 3 chr10 74071124 74071422 -66245343 - AluSx SINE Alu -13 299 1 348 309 59 48 chr10 74071422 74071635 -66245130 - HAL1b LINE L1 -966 382 173 1169 139 35 78 chr10 74071659 74071889 -66244876 - AluJb SINE Alu -7 305 86 954 170 11 0 chr10 74071970 74072152 -66244613 - L1MB8 LINE L1 -407 5776 5593 3681 180 72 7 chr10 74072290 74073140 -66243625 - L1MB3 LINE L1 -6 6177 5273 723 163 137 11 chr10 74073134 74073324 -66243441 - L1MB3 LINE L1 -1317 4829 4616 * 746 231 120 57 chr10 74073324 74073657 -66243108 - MSTD LTR MaLR -2 394 41 27739 61 15 5 chr10 74073852 74078569 -66238196 - L1PA6 LINE L1 -3 6151 1393 270 0 0 0 chr10 74079759 74079789 -66236976 + (A)n Simple_repeat Simple_repeat 1 30 0 2260 105 7 0 chr10 74080230 74080524 -66236241 - AluSx SINE Alu -16 296 1 271 315 0 0 chr10 74082019 74082092 -66234673 + (TA)n Simple_repeat Simple_repeat 2 74 0 224 369 53 39 chr10 74082428 74082646 -66234119 + L2 LINE L2 2444 2728 -585 269 159 222 0 chr10 74082646 74082709 -66234056 + MER5B DNA MER1_type 1 77 -101 287 129 48 0 chr10 74082769 74082831 -66233934 + Charlie5 DNA MER1_type 2452 2516 -96 374 191 11 45 chr10 74082833 74082922 -66233843 - MER96 DNA MER1_type? -78 97 12 2349 95 3 0 chr10 74083525 74083821 -66232944 - AluSx SINE Alu -15 297 1 612 157 0 0 chr10 74084140 74084229 -66232536 + AluJ/FLAM SINE Alu 1 89 -223 287 168 295 13 chr10 74084560 74084709 -66232056 + AluYa5 SINE Alu 155 300 -1 530 202 85 31 chr10 74085202 74085331 -66231434 + L2 LINE L2 3175 3310 -3 240 274 174 5 chr10 74085782 74085972 -66230793 + HAL1 LINE L1 2012 2233 -274 402 131 40 6 chr10 74086039 74086125 -66230640 + L1MC/D LINE L1 5356 5440 -725 212 330 11 11 chr10 74086404 74086492 -66230273 + GA-rich Low_complexity Low_complexity 1 88 0 2216 112 0 7 chr10 74086624 74086929 -66229836 - AluSx SINE Alu -9 303 1 1226 253 83 29 chr10 74086966 74087458 -66229307 + MLT1G1 LTR MaLR 1 525 -24 26 30 0 0 chr10 74087499 74087532 -66229233 + AT_rich Low_complexity Low_complexity 1 33 0 415 175 127 16 chr10 74087567 74087693 -66229072 + L1ME3A LINE L1 6023 6162 -8 33677 82 14 17 chr10 74087909 74091753 -66225012 + L1P LINE L1 24 3852 -2294 2403 68 0 0 chr10 74091753 74092048 -66224717 + AluY SINE Alu 2 296 -15 33677 82 14 17 chr10 74092048 74093277 -66223488 + L1P LINE L1 3852 5083 -1063 1007 164 0 6 chr10 74094150 74094315 -66222450 + FRAM SINE Alu 1 161 -15 282 29 0 0 chr10 74094417 74094452 -66222313 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2299 87 0 10 chr10 74094532 74094841 -66221924 - AluSg1 SINE Alu -3 306 1 439 259 27 0 chr10 74095036 74095074 -66221691 - L1MA10 LINE L1 -4 6330 6293 1270 195 37 126 chr10 74095074 74095186 -66221579 - L1ME2 LINE L1 -37 6127 6007 1656 183 3 10 chr10 74095186 74095476 -66221289 + AluJo SINE Alu 1 288 -24 1495 190 12 0 chr10 74095486 74095744 -66221021 + AluJb SINE Alu 1 261 -51 1270 195 37 126 chr10 74095744 74096184 -66220581 - L1ME2 LINE L1 -166 5998 5614 261 210 32 0 chr10 74096184 74096246 -66220519 - L1ME2 LINE L1 -917 5229 5166 1887 225 135 0 chr10 74096279 74096892 -66219873 + L1ME LINE L1 4253 4948 -1198 243 311 48 0 chr10 74097104 74097207 -66219558 - LTR52 LTR ERVL -200 221 114 645 192 62 7 chr10 74097226 74097372 -66219393 - LTR52 LTR ERVL -265 156 3 704 151 24 24 chr10 74097427 74097553 -66219212 + FLAM_C SINE Alu 1 126 -17 961 232 35 4 chr10 74097569 74097828 -66218937 + L1ME LINE L1 5014 5280 -866 718 113 0 60 chr10 74097830 74097963 -66218802 + FLAM_C SINE Alu 1 125 -18 1235 223 15 71 chr10 74097963 74098062 -66218703 + L1ME LINE L1 5297 5400 -766 2126 123 10 3 chr10 74098062 74098364 -66218401 + AluSx SINE Alu 1 304 -8 1235 223 15 71 chr10 74098364 74098659 -66218106 + L1ME LINE L1 5400 5669 -497 201 74 0 0 chr10 74098669 74098696 -66218069 + (T)n Simple_repeat Simple_repeat 1 27 0 2025 84 0 4 chr10 74098755 74099005 -66217760 - AluSx SINE Alu -63 249 1 1055 159 40 13 chr10 74099020 74099247 -66217518 - L1MB8 LINE L1 0 6178 5946 2577 157 50 26 chr10 74099255 74099638 -66217127 - L1MB8 LINE L1 -315 5869 5468 926 228 0 6 chr10 74099638 74099809 -66216956 - FAM SINE Alu -5 170 1 2577 157 50 26 chr10 74099809 74099961 -66216804 - L1MB8 LINE L1 -716 5468 5321 2264 90 3 0 chr10 74099975 74100263 -66216502 + AluSq SINE Alu 1 289 -24 22 42 0 0 chr10 74101113 74101137 -66215628 + AT_rich Low_complexity Low_complexity 1 24 0 803 163 8 0 chr10 74101859 74101982 -66214783 - FLAM_C SINE Alu -19 124 1 2371 109 0 6 chr10 74102229 74102540 -66214225 - AluSx SINE Alu -3 309 1 22 56 0 0 chr10 74102602 74102638 -66214127 + AT_rich Low_complexity Low_complexity 1 36 0 675 153 120 7 chr10 74102647 74102797 -66213968 + L1MC/D LINE L1 5635 5801 -558 420 167 122 0 chr10 74102797 74102887 -66213878 + Tigger4(Zombi) DNA MER2_type 1 101 -2630 475 351 100 19 chr10 74102929 74103288 -66213477 - L1MEd LINE L1 -5676 443 56 2272 131 42 65 chr10 74103399 74103895 -66212870 + MER31A LTR ERV1 1 485 0 2142 102 0 0 chr10 74103904 74104179 -66212586 + AluSx SINE Alu 1 275 -37 543 208 0 0 chr10 74104491 74104732 -66212033 + (TA)n Simple_repeat Simple_repeat 1 241 0 867 169 0 0 chr10 74104767 74104897 -66211868 - AluJb SINE Alu -54 258 129 237 278 247 10 chr10 74105173 74105270 -66211495 + MIR SINE MIR 46 165 -97 6580 178 67 91 chr10 74105364 74107032 -66209733 + L1MA4 LINE L1 474 2258 -4910 1033 70 0 0 chr10 74107032 74107161 -66209604 + AluSc SINE Alu 173 301 -8 6580 178 67 91 chr10 74107161 74107562 -66209203 + L1MA4 LINE L1 2258 2667 -4501 2509 179 53 49 chr10 74107562 74108262 -66208503 + L1MA4 LINE L1 4260 4962 -2205 2154 132 0 0 chr10 74108263 74108566 -66208199 + AluSx SINE Alu 1 303 -9 2594 130 37 0 chr10 74108569 74109001 -66207764 + L1MA4 LINE L1 6506 6953 -368 * 6813 159 27 25 chr10 74108999 74110341 -66206424 + L1P LINE L1 77 1421 -4725 843 173 99 0 chr10 74110471 74110633 -66206132 + AluSc SINE Alu 117 294 -15 2215 97 7 26 chr10 74110717 74111027 -66205738 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 74111492 74111513 -66205252 + AT_rich Low_complexity Low_complexity 1 21 0 848 146 126 10 chr10 74111588 74111787 -66204978 + Tigger6 DNA MER2_type 1376 1597 0 1867 163 11 0 chr10 74112442 74112792 -66203973 + L1MB7 LINE L1 5478 5831 -353 1272 176 14 5 chr10 74112792 74113014 -66203751 + AluJb SINE Alu 1 224 -88 288 169 117 13 chr10 74113421 74113498 -66203267 + LTR29 LTR ERV1 4 88 -534 * 1015 177 58 74 chr10 74113482 74113536 -66203229 + MER39 LTR ERV1 260 313 -394 2190 70 17 26 chr10 74113536 74113838 -66202927 + AluY SINE Alu 1 299 -12 1015 177 58 74 chr10 74113838 74114094 -66202671 + MER39 LTR ERV1 313 565 -142 1318 145 0 62 chr10 74114094 74114336 -66202429 - AluJb SINE Alu 0 312 86 605 154 33 8 chr10 74114337 74114481 -66202284 + MER39 LTR ERV1 457 564 -1 849 218 91 10 chr10 74114649 74114957 -66201808 - Charlie2 DNA MER1_type 0 2862 2530 1002 169 45 30 chr10 74115008 74115209 -66201556 + MER20 DNA MER1_type 16 219 0 958 211 176 49 chr10 74115209 74115797 -66200968 - Charlie2 DNA MER1_type -350 2512 1850 1015 243 14 9 chr10 74118435 74118657 -66198108 + MER58A DNA MER1_type 2 224 0 189 0 0 0 chr10 74120008 74120029 -66196736 + (A)n Simple_repeat Simple_repeat 1 21 0 1788 186 0 7 chr10 74120226 74120533 -66196232 + AluJb SINE Alu 1 305 -7 189 0 0 0 chr10 74120720 74120741 -66196024 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 626 309 22 11 chr10 74120978 74121159 -66195606 - MER5A DNA MER1_type -5 184 2 682 141 107 0 chr10 74122178 74122327 -66194438 - AluSg/x SINE Alu -12 297 133 34 42 0 0 chr10 74122578 74122626 -66194139 + AT_rich Low_complexity Low_complexity 1 48 0 282 29 0 0 chr10 74122642 74122677 -66194088 + (G)n Simple_repeat Simple_repeat 1 35 0 239 157 229 14 chr10 74122810 74122880 -66193885 + AluSg/x SINE Alu 203 287 -13 316 207 27 27 chr10 74123060 74123171 -66193594 + (CATATA)n Simple_repeat Simple_repeat 5 115 0 285 331 110 7 chr10 74123201 74123355 -66193410 - MIR SINE MIR -6 256 87 430 111 69 0 chr10 74123361 74123433 -66193332 + AluSp/q SINE Alu 204 280 -33 1005 58 52 19 chr10 74123434 74123589 -66193176 + AluY SINE Alu 1 160 -151 1794 133 27 14 chr10 74123924 74124217 -66192548 - AluY SINE Alu -14 297 1 2040 229 20 4 chr10 74124217 74124728 -66192037 - L1 LINE L1 -3058 3088 2570 1077 131 30 5 chr10 74124830 74125029 -66191736 + L1MB7 LINE L1 5962 6165 -19 1347 179 54 67 chr10 74125031 74125431 -66191334 + L1M4 LINE L1 4316 4711 -1435 2284 61 3 14 chr10 74125431 74125726 -66191039 + AluSp SINE Alu 1 292 -21 1347 179 54 67 chr10 74125726 74125790 -66190975 + L1M4 LINE L1 4711 4774 -1372 2058 93 52 10 chr10 74125790 74126079 -66190686 + AluSx SINE Alu 2 302 -10 331 141 295 0 chr10 74126381 74126459 -66190306 - AluSg/x SINE Alu -5 297 197 1157 68 12 6 chr10 74126577 74126740 -66190025 + AluY SINE Alu 145 308 -3 311 333 134 12 chr10 74126742 74126913 -66189852 - L2 LINE L2 -428 2886 2695 675 133 9 0 chr10 74127175 74127280 -66189485 + MLT1D LTR MaLR 1 106 -399 1747 185 0 13 chr10 74127324 74127627 -66189138 + AluJb SINE Alu 1 299 -13 1443 113 10 0 chr10 74127700 74127895 -66188870 + AluSx SINE Alu 1 197 -115 195 311 57 38 chr10 74127960 74128066 -66188699 + MIR SINE MIR 56 163 -99 315 185 0 0 chr10 74128432 74128497 -66188268 - AluS SINE Alu -5 297 233 629 157 1 37 chr10 74128627 74128788 -66187977 - L1MA4 LINE L1 -106 6194 6042 1009 92 7 0 chr10 74128806 74128959 -66187806 - MER41B LTR ERV1 0 635 482 513 99 27 18 chr10 74128960 74129071 -66187694 - L1MA4 LINE L1 -225 6075 5964 803 235 12 12 chr10 74129071 74129237 -66187528 - FRAM SINE Alu -10 166 1 279 308 45 9 chr10 74129327 74129451 -66187314 + L1ME LINE L1 5714 5841 -329 1172 183 18 23 chr10 74129459 74129678 -66187087 - MER20 DNA MER1_type -1 218 1 1879 53 30 23 chr10 74129769 74130035 -66186730 + L1MA1 LINE L1 6035 6302 0 541 92 30 92 chr10 74130114 74130245 -66186520 + AluSq/x SINE Alu 1 123 -189 1051 190 0 0 chr10 74130364 74130580 -66186185 - L1 LINE L1 -3751 2395 2180 2157 127 10 0 chr10 74130580 74130880 -66185885 - AluSq SINE Alu -10 303 1 1003 234 127 28 chr10 74130881 74131278 -66185487 + MLT1G LTR MaLR 126 590 0 305 361 8 16 chr10 74131375 74131497 -66185268 + L1MEc LINE L1 200 320 -6076 1000 86 0 33 chr10 74133198 74133349 -66183416 - AluSg SINE Alu -164 146 1 368 211 53 60 chr10 74133377 74133510 -66183255 - L1MB7 LINE L1 -141 6043 5912 3220 173 50 15 chr10 74133535 74134385 -66182380 - L1MB8 LINE L1 -183 5995 5110 539 195 16 8 chr10 74134379 74134502 -66182263 - L1MB8 LINE L1 -1520 4626 4503 * 423 285 0 69 chr10 74134573 74134673 -66182092 + MIR SINE MIR 5 94 -168 2280 105 0 0 chr10 74134673 74134967 -66181798 - AluSg SINE Alu -11 299 6 423 285 0 69 chr10 74134967 74135010 -66181755 + MIR SINE MIR 94 138 -124 1124 156 54 65 chr10 74135017 74135293 -66181472 - AluJb SINE Alu -18 294 22 2270 84 0 23 chr10 74136814 74137123 -66179642 + AluSg SINE Alu 1 302 -8 416 72 0 29 chr10 74137352 74137421 -66179344 + Alu SINE Alu 1 67 -242 287 123 18 0 chr10 74137764 74137821 -66178944 + AluSp/q SINE Alu 244 301 -2 280 143 36 0 chr10 74137959 74138015 -66178750 + L1ME4a LINE L1 5989 6046 -75 337 128 21 43 chr10 74138921 74139015 -66177750 + AluJ/FLAM SINE Alu 1 75 -227 324 271 130 28 chr10 74139644 74139821 -66176944 + L1M4 LINE L1 3504 3698 -2448 367 270 46 29 chr10 74139841 74140015 -66176750 + L1M4 LINE L1 24 200 -6659 3112 200 121 50 chr10 74140408 74141481 -66175284 + L1M4 LINE L1 3157 4333 -2624 1841 168 17 0 chr10 74141481 74141779 -66174986 + AluJb SINE Alu 1 303 -9 3112 200 121 50 chr10 74141779 74141950 -66174815 + L1M4 LINE L1 4333 4490 -2467 344 228 8 71 chr10 74141953 74142080 -66174685 + L1M4 LINE L1 5033 5151 -1806 1878 191 70 93 chr10 74142084 74142770 -66173995 + L1M4 LINE L1 4365 5034 -1923 304 204 148 37 chr10 74143153 74143261 -66173504 - L1MC5 LINE L1 -36 7925 7806 2601 62 0 0 chr10 74143272 74143578 -66173187 - AluY SINE Alu -5 306 1 248 323 21 0 chr10 74143630 74143726 -66173039 - L1MC4 LINE L1 -166 7876 7779 558 254 44 9 chr10 74144037 74144151 -66172614 + MIR SINE MIR 31 148 -114 394 232 18 18 chr10 74144151 74144263 -66172502 - MER103 DNA DNA -51 115 4 360 163 116 0 chr10 74144386 74144472 -66172293 - Charlie5 DNA MER1_type 0 2624 2529 1703 166 3 51 chr10 74144472 74144785 -66171980 + AluJo SINE Alu 1 298 -14 1123 213 70 60 chr10 74144800 74145200 -66171565 - L1MD2 LINE L1 -15 6344 5941 830 141 8 0 chr10 74145219 74145347 -66171418 - Tigger2 DNA MER2_type -14 2704 2576 395 78 78 39 chr10 74145360 74145437 -66171328 - Tigger2 DNA MER2_type -2507 211 132 798 144 98 6 chr10 74145591 74145764 -66171001 - L1MA9 LINE L1 -129 6183 5995 2388 93 3 0 chr10 74145847 74146157 -66170608 - AluSp SINE Alu -2 311 1 334 284 136 19 chr10 74146210 74146365 -66170400 - L1MD2 LINE L1 -463 5699 5524 267 244 176 17 chr10 74146510 74146629 -66170136 + L2 LINE L2 3169 3306 -7 234 292 142 9 chr10 74147105 74147218 -66169547 - MIR3 SINE MIR -67 141 14 24 85 0 0 chr10 74147474 74147533 -66169232 + AT_rich Low_complexity Low_complexity 1 59 0 201 74 0 0 chr10 74147539 74147566 -66169199 + (TG)n Simple_repeat Simple_repeat 2 28 0 2634 138 67 54 chr10 74147580 74148132 -66168633 + MER21A LTR ERV1 15 573 -358 1752 181 14 3 chr10 74148148 74148441 -66168324 - AluJo SINE Alu -16 296 1 475 228 89 8 chr10 74148482 74148605 -66168160 + L2 LINE L2 3180 3312 -1 435 265 85 40 chr10 74148767 74148967 -66167798 + L1MEd LINE L1 347 555 -5564 1298 148 45 49 chr10 74148969 74149212 -66167553 - AluJo SINE Alu -6 306 65 7681 201 81 15 chr10 74149368 74151223 -66165542 - L1 LINE L1 -807 6041 4312 1919 144 0 47 chr10 74151223 74151543 -66165222 - AluSx SINE Alu -7 305 1 7681 201 81 15 chr10 74151543 74151614 -66165151 - L1 LINE L1 -2536 4312 4247 872 143 0 0 chr10 74151614 74151740 -66165025 - FLAM_C SINE Alu -7 126 1 7681 201 81 15 chr10 74151740 74152663 -66164102 - L1 LINE L1 -2601 4247 2800 190 202 56 79 chr10 74153041 74153130 -66163635 + MIR SINE MIR 176 262 0 2123 119 20 0 chr10 74153284 74153578 -66163187 - AluSx SINE Alu -12 300 1 1246 242 121 10 chr10 74153587 74153992 -66162773 + L2 LINE L2 2863 3312 -1 2015 125 14 14 chr10 74154003 74154298 -66162467 + AluSx SINE Alu 1 295 -17 2197 173 173 20 chr10 74154375 74154969 -66161796 + pTR5 LTR ERV1 1352 2036 -402 353 178 0 0 chr10 74154969 74155042 -66161723 + LTR30 LTR ERV1 552 624 -98 706 155 54 0 chr10 74155042 74155171 -66161594 + LTR12 LTR ERV1 359 494 -220 22 0 0 0 chr10 74156015 74156037 -66160728 + AT_rich Low_complexity Low_complexity 1 22 0 2164 78 0 7 chr10 74156178 74156460 -66160305 - AluY SINE Alu -31 280 1 552 16 0 0 chr10 74156537 74156638 -66160127 - AluY SINE Alu 0 318 218 2349 82 3 10 chr10 74157251 74157557 -66159208 + AluSp SINE Alu 1 304 -9 276 353 113 23 chr10 74158427 74158481 -66158284 - MIR SINE MIR -12 250 202 1936 120 4 4 chr10 74158481 74158771 -66157994 - AluSx SINE Alu 0 305 16 276 353 113 23 chr10 74158771 74158936 -66157829 - MIR SINE MIR -60 202 10 202 98 98 0 chr10 74158944 74158995 -66157770 + (TTAA)n Simple_repeat Simple_repeat 4 59 0 24 0 0 0 chr10 74159039 74159063 -66157702 + AT_rich Low_complexity Low_complexity 1 24 0 283 314 164 14 chr10 74159103 74159243 -66157522 + MIR SINE MIR 28 188 -74 1737 148 42 35 chr10 74159253 74159563 -66157202 + AluJo SINE Alu 1 312 0 1007 164 0 6 chr10 74160430 74160595 -66156170 + FRAM SINE Alu 1 161 -15 282 29 0 0 chr10 74160697 74160732 -66156033 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2343 104 0 0 chr10 74160812 74161120 -66155645 - AluY SINE Alu -3 308 1 342 281 145 2 chr10 74161585 74161716 -66155049 + MIR3 SINE MIR 11 158 -50 848 200 46 11 chr10 74161719 74161894 -66154871 - MER58A DNA MER1_type -1 223 43 1905 114 21 7 chr10 74161895 74162185 -66154580 + AluSc SINE Alu 1 294 -15 874 240 97 19 chr10 74162326 74162593 -66154172 + L2 LINE L2 2937 3224 -89 792 91 9 9 chr10 74162704 74162814 -66153951 - Tigger2 DNA MER2_type -2608 110 1 2279 177 52 19 chr10 74162832 74163296 -66153469 - L1MD2 LINE L1 -461 5898 5420 778 133 255 0 chr10 74163296 74163484 -66153281 - MER33 DNA MER1_type -88 236 1 267 54 0 0 chr10 74163941 74163978 -66152787 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1370 185 4 43 chr10 74164000 74164276 -66152489 + AluJb SINE Alu 27 291 -21 1933 167 0 7 chr10 74164286 74164591 -66152174 + AluJb SINE Alu 1 303 -9 234 0 0 0 chr10 74164594 74164620 -66152145 + (TA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 74165362 74165390 -66151375 + AT_rich Low_complexity Low_complexity 1 28 0 867 127 85 67 chr10 74166170 74166335 -66150430 + FAM SINE Alu 1 168 -7 1979 89 19 0 chr10 74166346 74166603 -66150162 + AluSq SINE Alu 34 295 -18 382 193 64 93 chr10 74166614 74166754 -66150011 + MER5A DNA MER1_type 53 188 -1 2494 69 3 0 chr10 74167072 74167375 -66149390 + AluSp SINE Alu 1 304 -9 1842 156 9 34 chr10 74167390 74167710 -66149055 + AluJo SINE Alu 1 312 0 359 306 104 0 chr10 74168215 74168349 -66148416 + MIR3 SINE MIR 60 207 -1 991 151 17 17 chr10 74168466 74168638 -66148127 + AluJo SINE Alu 54 225 -87 746 101 17 25 chr10 74169452 74169571 -66147194 - FLAM_C SINE Alu -15 118 1 2430 54 3 3 chr10 74169711 74170008 -66146757 - AluY SINE Alu -14 297 1 999 184 102 0 chr10 74170081 74170277 -66146488 - MER58A DNA MER1_type -8 216 1 320 292 139 0 chr10 74170868 74171005 -66145760 + L2 LINE L2 3150 3305 -8 2434 84 0 0 chr10 74171321 74171619 -66145146 + AluSg SINE Alu 1 298 -12 807 151 0 0 chr10 74171666 74171792 -66144973 - AluSg/x SINE Alu -3 309 184 1812 204 66 53 chr10 74172285 74172815 -66143950 - L1ME2 LINE L1 -40 6124 5588 1204 229 49 8 chr10 74172827 74173302 -66143463 - MLT1E LTR MaLR -7 586 1 1269 246 41 130 chr10 74173304 74174037 -66142728 - MLT1E-int LTR MaLR -15 1356 689 1231 225 102 28 chr10 74174167 74174491 -66142274 - MLT1E-int LTR MaLR -710 661 314 374 238 0 0 chr10 74174493 74174577 -66142188 - MLT1E-int LTR MaLR -1213 158 75 * 4932 170 40 29 chr10 74174570 74176013 -66140752 + L1MB7 LINE L1 4341 5806 -378 1699 141 127 50 chr10 74176013 74176375 -66140390 + MLT1B LTR MaLR 1 390 0 4932 170 40 29 chr10 74176375 74176758 -66140007 + L1MB7 LINE L1 5806 6183 -1 1330 273 81 21 chr10 74176758 74177472 -66139293 - L1MEc LINE L1 -4658 1738 982 2349 246 125 18 chr10 74177484 74178276 -66138489 - L1MEc LINE L1 -5484 912 36 1122 168 0 11 chr10 74178408 74178593 -66138172 + AluJo SINE Alu 112 294 -18 2127 210 101 34 chr10 74178604 74179190 -66137575 - L1ME3A LINE L1 -95 6075 5451 778 212 0 7 chr10 74179610 74179761 -66137004 - MER58B DNA MER1_type 0 341 192 616 190 151 6 chr10 74179778 74179935 -66136830 + L1ME3A LINE L1 5663 5846 -328 2411 80 7 0 chr10 74179935 74180235 -66136530 - AluSx SINE Alu -10 302 1 588 181 9 0 chr10 74180264 74180369 -66136396 + L1MB5 LINE L1 6018 6123 -51 6993 126 71 9 chr10 74180369 74181525 -66135240 + Tigger3b DNA MER2_type 1 1228 -3 543 291 61 19 chr10 74181766 74181979 -66134786 + MIR SINE MIR 2 223 -39 21 0 0 0 chr10 74182262 74182283 -66134482 + GC_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr10 74182354 74182386 -66134379 + (TCC)n Simple_repeat Simple_repeat 2 33 0 327 261 176 24 chr10 74182860 74183025 -66133740 + MIR3 SINE MIR 17 206 -2 6474 117 30 43 chr10 74183342 74185088 -66131677 + L1MA3 LINE L1 4583 6305 0 2251 86 0 0 chr10 74185095 74185374 -66131391 + AluSg SINE Alu 32 310 0 315 310 78 0 chr10 74185555 74185684 -66131081 - MIR3 SINE MIR -9 199 61 366 191 67 105 chr10 74185823 74185961 -66130804 - MER113 DNA MER1_type? -308 213 84 1709 170 0 27 chr10 74185961 74186255 -66130510 + AluJb SINE Alu 19 304 -8 366 191 67 105 chr10 74186255 74186326 -66130439 - MER113 DNA MER1_type? -437 84 12 2147 120 0 49 chr10 74186335 74186660 -66130105 - AluSx SINE Alu -3 309 1 2248 169 11 0 chr10 74187573 74187933 -66128832 - LTR57 LTR ERVL -47 364 1 586 354 129 13 chr10 74188233 74188629 -66128136 + L2 LINE L2 2339 2780 -534 3591 203 105 9 chr10 74188783 74189734 -66127031 - L1 LINE L1 -2261 3885 2844 256 250 7 96 chr10 74189754 74189890 -66126875 + L2 LINE L2 2867 2990 -282 2289 86 7 20 chr10 74190415 74190716 -66126049 - AluSx SINE Alu -15 297 1 252 0 0 0 chr10 74190733 74190761 -66126004 + (TA)n Simple_repeat Simple_repeat 2 29 0 2304 95 0 0 chr10 74190761 74191056 -66125709 - AluSc SINE Alu -14 295 1 492 94 82 94 chr10 74191129 74191214 -66125551 - MER58B DNA MER1_type -8 333 124 9370 134 21 35 chr10 74191353 74191695 -66125070 + L1MA5A LINE L1 3616 3961 -2336 1984 152 0 10 chr10 74191695 74191992 -66124773 - AluJb SINE Alu -18 294 1 9370 134 21 35 chr10 74191992 74192154 -66124611 + L1MA5A LINE L1 3961 4124 -2173 1900 144 6 60 chr10 74192154 74192473 -66124292 - AluJb SINE Alu -10 302 1 9370 134 21 35 chr10 74192473 74194664 -66122101 + L1MA5A LINE L1 4124 6273 -24 1390 180 72 36 chr10 74194664 74194824 -66121941 - AluJo SINE Alu -24 288 112 204 40 0 0 chr10 74194824 74194849 -66121916 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1390 180 72 36 chr10 74194849 74194966 -66121799 - AluJo SINE Alu -200 112 1 9370 134 21 35 chr10 74194966 74194990 -66121775 + L1MA5A LINE L1 6273 6296 -1 2882 214 31 79 chr10 74195002 74195250 -66121515 + L1 LINE L1 2838 3096 -3050 2358 102 0 0 chr10 74195250 74195553 -66121212 + AluSq SINE Alu 1 303 -10 2167 128 0 10 chr10 74195561 74195873 -66120892 + AluSx SINE Alu 1 309 -3 2882 214 31 79 chr10 74195873 74196204 -66120561 + L1 LINE L1 3103 3448 -2698 339 48 0 0 chr10 74196204 74196246 -66120519 + tRNA-Ile-ATT tRNA tRNA 1 42 -35 2882 214 31 79 chr10 74196246 74196449 -66120316 + L1 LINE L1 3448 3621 -2525 1827 101 4 23 chr10 74196449 74196706 -66120059 - AluSx SINE Alu -25 287 36 2882 214 31 79 chr10 74196706 74196834 -66119931 + L1 LINE L1 3621 3754 -2392 1565 188 42 7 chr10 74196834 74196957 -66119808 + AluJo SINE Alu 1 118 -194 225 0 0 0 chr10 74196957 74196982 -66119783 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1565 188 42 7 chr10 74196982 74197146 -66119619 + AluJo SINE Alu 118 298 -14 788 268 13 0 chr10 74197159 74197316 -66119449 + FAM SINE Alu 1 159 -16 1525 193 14 30 chr10 74197365 74197661 -66119104 - AluJo SINE Alu -21 291 1 4079 217 13 36 chr10 74197672 74197785 -66118980 + L1 LINE L1 3742 3856 -2290 2082 133 3 0 chr10 74197785 74198085 -66118680 + AluSx SINE Alu 1 301 -11 4079 217 13 36 chr10 74198085 74198505 -66118260 + L1 LINE L1 3856 4284 -1862 216 67 0 0 chr10 74198505 74198535 -66118230 + (CA)n Simple_repeat Simple_repeat 1 30 0 4079 217 13 36 chr10 74198535 74198724 -66118041 + L1 LINE L1 4284 4476 -1670 2462 90 0 0 chr10 74198724 74199034 -66117731 - AluY SINE Alu 0 311 2 4079 217 13 36 chr10 74199034 74199330 -66117435 + L1 LINE L1 4476 4738 -1408 2114 146 0 0 chr10 74199341 74199650 -66117115 + AluSx SINE Alu 2 310 -2 11870 173 105 33 chr10 74199667 74199963 -66116802 + L1M1 LINE L1 13 286 -7279 1877 140 17 10 chr10 74199963 74200255 -66116510 - AluJb SINE Alu -18 294 1 11870 173 105 33 chr10 74200255 74202477 -66114288 + L1M1 LINE L1 286 3064 -4501 1556 201 0 18 chr10 74202477 74202760 -66114005 + AluJb SINE Alu 1 278 -34 11870 173 105 33 chr10 74202760 74202979 -66113786 + L1M1 LINE L1 3064 3266 -4299 891 215 121 0 chr10 74203079 74203344 -66113421 + L1ME1 LINE L1 4351 4647 -1499 946 177 0 0 chr10 74203361 74203502 -66113263 - FRAM SINE Alu -30 146 6 1435 226 34 53 chr10 74203506 74203615 -66113150 + L1ME1 LINE L1 4636 4746 -1400 2123 111 19 16 chr10 74203615 74203922 -66112843 - AluSx SINE Alu -4 308 1 1435 226 34 53 chr10 74203922 74204281 -66112484 + L1ME1 LINE L1 4746 5095 -1051 479 216 22 36 chr10 74204379 74204518 -66112247 + BC200 scRNA scRNA 31 167 -33 3282 214 88 22 chr10 74204518 74204614 -66112151 + L1ME1 LINE L1 5124 5212 -954 351 0 0 0 chr10 74204614 74204653 -66112112 + (TG)n Simple_repeat Simple_repeat 2 40 0 3282 214 88 22 chr10 74204653 74204968 -66111797 + L1ME1 LINE L1 5212 5505 -661 1142 177 84 26 chr10 74204968 74205194 -66111571 - MER8 DNA MER2_type 0 239 1 3282 214 88 22 chr10 74205194 74205735 -66111030 + L1ME1 LINE L1 5505 6162 -4 363 281 116 71 chr10 74205745 74205858 -66110907 + L1M4 LINE L1 3743 3849 -2297 2245 114 0 0 chr10 74205858 74206155 -66110610 + AluSq SINE Alu 1 297 -16 363 281 116 71 chr10 74206155 74206464 -66110301 + L1M4 LINE L1 3849 4184 -1962 774 105 0 0 chr10 74206720 74206815 -66109950 - AluJo SINE Alu -30 282 188 1691 121 94 35 chr10 74206815 74207155 -66109610 + THE1C LTR MaLR 1 360 -15 1078 181 0 5 chr10 74207160 74207348 -66109417 - AluJo SINE Alu -120 192 6 534 294 82 102 chr10 74207457 74208144 -66108621 + L2 LINE L2 2590 3250 -22 4169 247 45 16 chr10 74209946 74211062 -66105703 + L1M2c LINE L1 354 1378 -5411 1988 123 4 0 chr10 74211183 74211460 -66105305 - AluSx SINE Alu -18 294 17 654 213 0 16 chr10 74211530 74211652 -66105113 - 7SLRNA srpRNA srpRNA -7 313 194 1663 164 7 42 chr10 74211918 74212228 -66104537 + AluJo SINE Alu 1 299 -13 2082 121 7 16 chr10 74213857 74214164 -66102601 - AluSx SINE Alu -8 304 1 27 0 0 0 chr10 74214847 74214874 -66101891 + AT_rich Low_complexity Low_complexity 1 27 0 722 155 8 23 chr10 74214977 74215106 -66101659 + AluSq/x SINE Alu 1 127 -186 22 56 0 0 chr10 74215112 74215148 -66101617 + AT_rich Low_complexity Low_complexity 1 36 0 1877 142 17 13 chr10 74215748 74216050 -66100715 - AluSx SINE Alu -5 307 5 24 0 0 0 chr10 74216364 74216388 -66100377 + AT_rich Low_complexity Low_complexity 1 24 0 278 49 0 24 chr10 74216388 74216429 -66100336 + (TG)n Simple_repeat Simple_repeat 1 40 0 549 106 0 12 chr10 74216434 74216519 -66100246 - AluS SINE Alu -229 84 1 819 156 0 0 chr10 74216608 74216730 -66100035 + FLAM_A SINE Alu 1 122 -11 461 150 17 58 chr10 74216745 74216865 -66099900 + L1MB8 LINE L1 6058 6172 -6 731 197 0 8 chr10 74216882 74217009 -66099756 - FLAM_A SINE Alu -5 128 3 1885 178 0 25 chr10 74218349 74218664 -66098101 + AluJo SINE Alu 3 309 -3 2545 81 0 0 chr10 74219252 74219562 -66097203 - AluSx SINE Alu -2 310 1 1443 179 43 8 chr10 74219826 74220083 -66096682 + AluJb SINE Alu 3 268 -44 2263 93 0 7 chr10 74220110 74220431 -66096334 + AluSq SINE Alu 1 313 0 234 217 50 17 chr10 74220609 74220669 -66096096 + MLT1K LTR MaLR 291 352 -236 329 194 56 0 chr10 74220811 74220883 -66095882 + MLT1K LTR MaLR 513 588 0 356 197 82 5 chr10 74220947 74221071 -66095694 - MER5A DNA MER1_type 0 189 1 2276 98 0 16 chr10 74221291 74221598 -66095167 + AluSx SINE Alu 1 302 -10 1792 125 99 35 chr10 74222309 74222403 -66094362 + MER47A DNA MER2_type 1 88 -2235 1875 122 61 0 chr10 74222403 74222681 -66094084 + AluSg SINE Alu 1 295 -15 1792 125 99 35 chr10 74222681 74222929 -66093836 + MER47A DNA MER2_type 88 365 -1 691 121 0 0 chr10 74223147 74223246 -66093519 - HY3 scRNA scRNA -2 99 1 21 36 0 0 chr10 74224476 74224504 -66092261 + AT_rich Low_complexity Low_complexity 1 28 0 1523 149 0 71 chr10 74224967 74225262 -66091503 - AluJo SINE Alu -36 276 3 1794 151 0 36 chr10 74225501 74225805 -66090960 + AluJb SINE Alu 1 293 -19 1055 166 96 25 chr10 74225846 74226040 -66090725 + L1MB8 LINE L1 5078 5257 -921 2426 78 3 0 chr10 74226040 74226336 -66090429 - AluSp SINE Alu -16 297 1 1055 166 96 25 chr10 74226336 74226500 -66090265 + L1MB8 LINE L1 5257 5408 -770 926 228 0 6 chr10 74226500 74226671 -66090094 + FAM SINE Alu 1 170 -5 1055 166 96 25 chr10 74226671 74227289 -66089476 + L1MB8 LINE L1 5408 6178 0 2449 91 0 3 chr10 74227304 74227613 -66089152 + AluSx SINE Alu 1 308 -4 653 202 0 0 chr10 74227623 74227752 -66089013 - L1ME LINE L1 -497 5669 5541 1731 148 10 37 chr10 74228167 74228464 -66088301 - AluJo SINE Alu -21 291 3 236 108 0 0 chr10 74228464 74228501 -66088264 + Alu SINE Alu 94 130 -3 30 0 0 0 chr10 74228501 74228531 -66088234 + AT_rich Low_complexity Low_complexity 1 30 0 1904 154 7 10 chr10 74228647 74228946 -66087819 + AluJo SINE Alu 1 298 -14 2519 70 0 13 chr10 74229366 74229681 -66087084 + AluY SINE Alu 1 311 0 315 0 0 0 chr10 74229683 74229718 -66087047 + (TA)n Simple_repeat Simple_repeat 2 36 0 195 42 0 0 chr10 74229717 74229741 -66087024 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 21 36 0 0 chr10 74229754 74229782 -66086983 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 74231039 74231066 -66085699 + (A)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 74231331 74231352 -66085413 + AT_rich Low_complexity Low_complexity 1 21 0 744 299 56 9 chr10 74233218 74233449 -66083316 + MIR SINE MIR 13 254 -8 1853 119 88 65 chr10 74233830 74234098 -66082667 + Charlie1b DNA MER1_type 53 336 -2425 852 120 16 0 chr10 74234098 74234223 -66082542 + FLAM_C SINE Alu 1 127 -6 1853 119 88 65 chr10 74234223 74234398 -66082367 + Charlie1b DNA MER1_type 336 506 -17 2152 117 0 7 chr10 74234400 74234698 -66082067 + AluSc SINE Alu 1 296 -13 2510 227 63 5 chr10 74234799 74235390 -66081375 + MER69 DNA AcHobo 3 627 -1899 1469 160 34 34 chr10 74235398 74235691 -66081074 - AluJo SINE Alu -19 293 1 409 189 183 74 chr10 74235726 74235824 -66080941 + MER69 DNA AcHobo 1917 2003 -523 1288 200 56 25 chr10 74235824 74236109 -66080656 + AluJb SINE Alu 1 294 -18 409 189 183 74 chr10 74236109 74236185 -66080580 + MER69 DNA AcHobo 2003 2110 -416 290 225 54 62 chr10 74236249 74236378 -66080387 - L2 LINE L2 -4 3309 3182 216 222 111 0 chr10 74236405 74236468 -66080297 - L2 LINE L2 0 3313 3244 2117 115 38 0 chr10 74236534 74236821 -66079944 + AluSx SINE Alu 1 298 -14 1873 131 0 64 chr10 74236907 74237219 -66079546 + AluSx SINE Alu 12 303 -9 2201 112 0 0 chr10 74237219 74237514 -66079251 + AluSc SINE Alu 1 295 -14 252 0 0 0 chr10 74237514 74237542 -66079223 + (TA)n Simple_repeat Simple_repeat 2 29 0 2041 101 3 32 chr10 74237559 74237867 -66078898 + AluSq SINE Alu 1 299 -14 441 0 0 0 chr10 74238056 74238105 -66078660 + (CA)n Simple_repeat Simple_repeat 2 50 0 2414 56 0 0 chr10 74238143 74238469 -66078296 + AluY SINE Alu 1 311 0 2251 206 25 32 chr10 74238756 74238851 -66077914 - L1 LINE L1 -751 5395 5301 2219 114 0 0 chr10 74238851 74239140 -66077625 - AluSq SINE Alu -24 289 1 2251 206 25 32 chr10 74239140 74239637 -66077128 - L1 LINE L1 -845 5301 4807 2319 92 10 0 chr10 74239881 74240175 -66076590 - AluSx SINE Alu -15 297 1 2090 142 3 0 chr10 74240360 74240671 -66076094 + AluJb SINE Alu 1 312 0 222 271 0 0 chr10 74240683 74240731 -66076034 - L2 LINE L2 -24 3289 3242 314 329 145 13 chr10 74240824 74241058 -66075707 - L2 LINE L2 -404 2910 2646 919 120 0 23 chr10 74241205 74241338 -66075427 + FRAM SINE Alu 29 158 -18 273 253 175 24 chr10 74241476 74241671 -66075094 + L1MC4 LINE L1 6756 7000 -1002 24 0 0 0 chr10 74242223 74242247 -66074518 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr10 74242524 74242566 -66074199 + AT_rich Low_complexity Low_complexity 1 42 0 2400 94 0 22 chr10 74242679 74242998 -66073767 + AluSx SINE Alu 1 312 0 1880 116 101 0 chr10 74243002 74243279 -66073486 + AluSg SINE Alu 3 307 -3 2520 127 67 20 chr10 74243458 74243860 -66072905 + MSTC LTR MaLR 4 424 -4 699 100 0 10 chr10 74245337 74245437 -66071328 + HY3 scRNA scRNA 1 99 -2 243 0 0 0 chr10 74245437 74245464 -66071301 + (A)n Simple_repeat Simple_repeat 1 27 0 1953 151 0 13 chr10 74245464 74245768 -66070997 + AluJb SINE Alu 1 300 -12 308 328 135 31 chr10 74245866 74246192 -66070573 + L2 LINE L2 1831 2190 -1124 471 181 0 53 chr10 74246418 74246512 -66070253 + AluSg/x SINE Alu 203 291 -19 342 202 79 18 chr10 74246543 74246657 -66070108 - L1ME4a LINE L1 -23 6098 5978 2305 99 0 7 chr10 74246776 74247078 -66069687 + AluSq SINE Alu 1 300 -13 2112 92 17 3 chr10 74247078 74247373 -66069392 + AluSp SINE Alu 1 299 -14 1753 175 17 10 chr10 74247396 74247693 -66069072 + AluJo SINE Alu 1 299 -13 639 249 6 30 chr10 74247946 74248111 -66068654 + FAM SINE Alu 5 165 -10 359 284 118 0 chr10 74248173 74248342 -66068423 - L1MEd LINE L1 -4931 1188 1000 2923 217 54 69 chr10 74248548 74249356 -66067409 - L1ME2 LINE L1 -11 6153 5334 207 0 0 0 chr10 74249356 74249379 -66067386 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 634 234 0 8 chr10 74249379 74249503 -66067262 - FLAM_C SINE Alu -10 123 1 2923 217 54 69 chr10 74249503 74249662 -66067103 - L1ME2 LINE L1 -829 5335 5175 1604 93 0 22 chr10 74249662 74249888 -66066877 - AluSg/x SINE Alu -10 299 79 2923 217 54 69 chr10 74249888 74250085 -66066680 - L1ME2 LINE L1 -989 5175 4996 1090 200 15 0 chr10 74250204 74250399 -66066366 + AluJb SINE Alu 64 261 -51 1237 178 51 58 chr10 74250405 74250839 -66065926 - L1ME2 LINE L1 -138 6028 5614 261 210 32 0 chr10 74250839 74250901 -66065864 - L1ME2 LINE L1 -917 5229 5166 1555 224 90 1 chr10 74250934 74251547 -66065218 + L1ME LINE L1 4253 4948 -1198 243 311 48 0 chr10 74251759 74251862 -66064903 - LTR52 LTR ERVL -200 221 114 645 192 62 7 chr10 74251881 74252027 -66064738 - LTR52 LTR ERVL -265 156 3 704 151 24 24 chr10 74252082 74252208 -66064557 + FLAM_C SINE Alu 1 126 -17 994 218 43 4 chr10 74252224 74252481 -66064284 + L1ME LINE L1 5014 5280 -866 907 126 0 16 chr10 74252483 74252610 -66064155 + FLAM_C SINE Alu 1 125 -18 1213 222 15 73 chr10 74252610 74252709 -66064056 + L1ME LINE L1 5297 5400 -766 2181 126 10 0 chr10 74252709 74253010 -66063755 + AluSx SINE Alu 1 304 -8 1213 222 15 73 chr10 74253010 74253306 -66063459 + L1ME LINE L1 5400 5669 -497 1709 128 4 15 chr10 74253316 74253590 -66063175 - AluSg SINE Alu -4 306 36 1113 170 73 0 chr10 74254187 74254405 -66062360 - MER46A DNA MER2_type -1 235 2 2092 117 37 0 chr10 74254523 74254823 -66061942 - AluSx SINE Alu -1 311 1 1449 132 5 0 chr10 74254885 74255098 -66061667 + AluJb SINE Alu 1 214 -98 602 101 0 0 chr10 74255098 74255177 -66061588 + AluSq/x SINE Alu 39 117 -196 488 150 12 0 chr10 74255177 74255257 -66061508 + AluJ/FRAM SINE Alu 216 296 -16 2223 102 0 10 chr10 74255355 74255648 -66061117 - AluSx SINE Alu -22 290 1 338 75 38 0 chr10 74255654 74255707 -66061058 + L1MB7 LINE L1 6130 6184 0 618 218 104 60 chr10 74256466 74256783 -66059982 - L1ME LINE L1 -390 5774 5444 1978 155 3 0 chr10 74257475 74257772 -66058993 - AluSx SINE Alu -14 298 1 1919 155 0 37 chr10 74257823 74258146 -66058619 - AluJb SINE Alu -1 311 1 936 177 97 113 chr10 74258851 74259218 -66057547 + MLT1A1 LTR MaLR 1 365 0 328 259 57 51 chr10 74259997 74260461 -66056304 + L1MC4a LINE L1 4965 5433 -757 7425 30 0 1 chr10 74260540 74262174 -66054591 - L1PA4 LINE L1 0 6155 4530 1005 290 74 14 chr10 74262197 74262325 -66054440 + L1MC4a LINE L1 5460 5579 -2229 1937 136 46 129 chr10 74262325 74262781 -66053984 - MER47B DNA MER2_type 0 418 1 1005 290 74 14 chr10 74262781 74263073 -66053692 + L1MC4a LINE L1 5579 5905 -1903 333 294 58 44 chr10 74264066 74264379 -66052386 + L1ME LINE L1 5283 5610 -564 2293 104 0 7 chr10 74264520 74264818 -66051947 - AluSq SINE Alu -17 296 1 1554 169 14 32 chr10 74264844 74265128 -66051637 - AluJo SINE Alu -33 279 1 2166 119 7 0 chr10 74265561 74265856 -66050909 + AluSg SINE Alu 1 297 -13 766 214 15 0 chr10 74265861 74265992 -66050773 + FLAM_A SINE Alu 1 133 0 21 0 0 0 chr10 74266244 74266265 -66050500 + AT_rich Low_complexity Low_complexity 1 21 0 2373 102 0 0 chr10 74266979 74267283 -66049482 + AluSg SINE Alu 1 304 -6 2501 60 0 7 chr10 74268050 74268351 -66048414 - AluY SINE Alu -12 299 1 33 25 0 0 chr10 74268634 74268674 -66048091 + AT_rich Low_complexity Low_complexity 1 40 0 297 0 0 0 chr10 74268860 74268893 -66047872 + (TAA)n Simple_repeat Simple_repeat 2 34 0 285 213 0 0 chr10 74269485 74269532 -66047233 + MER4D LTR ERV1 791 837 -66 413 264 170 31 chr10 74269976 74270067 -66046698 - MER5A DNA MER1_type 0 189 112 2136 114 0 10 chr10 74270067 74270411 -66046354 - AluSx SINE Alu 0 312 1 413 264 170 31 chr10 74270411 74270478 -66046287 - MER5A DNA MER1_type -77 112 9 427 192 144 0 chr10 74271658 74271762 -66045003 - L1ME3 LINE L1 0 6162 6044 1373 134 99 0 chr10 74271774 74272006 -66044759 - L1MB7 LINE L1 -6 6178 5924 1283 90 0 0 chr10 74272422 74272588 -66044177 + AluSq SINE Alu 137 302 -11 37 23 0 0 chr10 74272707 74272751 -66044014 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr10 74272905 74272933 -66043832 + AT_rich Low_complexity Low_complexity 1 28 0 4174 195 54 24 chr10 74275052 74276797 -66039968 + L1M2 LINE L1 1850 3646 -3202 478 113 0 0 chr10 74276922 74276993 -66039772 + AluS SINE Alu 232 302 -8 29 0 0 0 chr10 74277078 74277107 -66039658 + AT_rich Low_complexity Low_complexity 1 29 0 2082 123 0 0 chr10 74277108 74277392 -66039373 - AluSg SINE Alu -26 284 1 1095 103 0 0 chr10 74277393 74277529 -66039236 - AluSq/x SINE Alu -177 136 1 203 229 0 0 chr10 74278900 74278935 -66037830 + (TG)n Simple_repeat Simple_repeat 2 36 0 2405 68 0 3 chr10 74278936 74279230 -66037535 - AluY SINE Alu -18 293 1 300 283 17 33 chr10 74279273 74279393 -66037372 + L1ME4a LINE L1 5959 6076 -45 2011 93 10 30 chr10 74279418 74279720 -66037045 - AluSq SINE Alu -17 296 1 2375 88 3 3 chr10 74279942 74280247 -66036518 + AluSq SINE Alu 1 305 -8 4593 149 58 38 chr10 74280406 74281672 -66035093 + L1MB1 LINE L1 4881 6172 -17 1897 144 3 21 chr10 74281907 74282061 -66034704 - AluSx SINE Alu -26 286 138 2209 83 10 0 chr10 74282061 74282349 -66034416 - AluY SINE Alu -20 291 1 1897 144 3 21 chr10 74282349 74282485 -66034280 - AluSx SINE Alu -174 138 1 804 267 70 88 chr10 74282526 74282956 -66033809 - MLT1J LTR MaLR -50 461 40 420 175 52 41 chr10 74283139 74283236 -66033529 - L1ME3A LINE L1 -9 6161 6064 238 335 76 46 chr10 74284354 74284551 -66032214 + L2 LINE L2 2983 3185 -87 2256 96 0 16 chr10 74285784 74286087 -66030678 + AluSx SINE Alu 1 298 -14 2098 114 10 26 chr10 74287058 74287230 -66029535 - AluSc SINE Alu -8 301 135 2267 56 10 46 chr10 74287230 74287536 -66029229 - AluY SINE Alu -14 297 3 2098 114 10 26 chr10 74287536 74287669 -66029096 - AluSc SINE Alu -174 135 1 1673 160 4 0 chr10 74288252 74288514 -66028251 + AluJo SINE Alu 6 268 -44 280 183 99 14 chr10 74288779 74288850 -66027915 - MIR SINE MIR -94 168 92 940 71 8 0 chr10 74290104 74290230 -66026535 + AluY SINE Alu 184 310 -1 510 257 186 44 chr10 74290283 74290415 -66026350 + MIR SINE MIR 1 113 -149 3975 104 23 11 chr10 74290415 74290936 -66025829 - MER1A DNA MER1_type 0 527 1 510 257 186 44 chr10 74290936 74291029 -66025736 + MIR SINE MIR 113 258 -4 1987 148 0 29 chr10 74291135 74291276 -66025489 + AluSx SINE Alu 1 145 -167 2277 107 3 0 chr10 74291276 74291586 -66025179 + AluSx SINE Alu 1 311 -1 1987 148 0 29 chr10 74291586 74291754 -66025011 + AluSx SINE Alu 145 301 -11 1960 150 3 3 chr10 74291823 74292116 -66024649 + AluSx SINE Alu 1 293 -19 2354 79 10 0 chr10 74292742 74293045 -66023720 + AluSp SINE Alu 1 306 -7 314 243 109 48 chr10 74293177 74293387 -66023378 + L1ME4a LINE L1 5842 6064 -57 23 0 0 0 chr10 74293388 74293411 -66023354 + AT_rich Low_complexity Low_complexity 1 23 0 2386 101 0 0 chr10 74293488 74293795 -66022970 - AluSc SINE Alu -2 307 1 1417 143 132 0 chr10 74293949 74294221 -66022544 - AluJo SINE Alu -4 308 1 628 255 116 88 chr10 74294490 74294988 -66021777 - L2 LINE L2 -1 3312 2756 1433 77 14 23 chr10 74295251 74295472 -66021293 - L1MA1 LINE L1 -105 6197 5979 311 104 209 0 chr10 74295473 74295540 -66021225 - L1 LINE L1 -2987 3159 3079 2440 74 0 0 chr10 74295540 74295839 -66020926 - AluY SINE Alu -12 299 1 877 156 0 8 chr10 74295864 74295992 -66020773 - FLAM_A SINE Alu -6 127 1 2350 83 0 22 chr10 74296369 74296681 -66020084 + AluSq SINE Alu 1 305 -8 2301 106 0 0 chr10 74298205 74298506 -66018259 + AluSx SINE Alu 1 301 -11 1057 107 0 0 chr10 74298787 74298927 -66017838 - AluSp SINE Alu -45 268 129 222 136 0 0 chr10 74298952 74298996 -66017769 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 1293 147 10 10 chr10 74299003 74299226 -66017539 - AluJb SINE Alu 0 312 86 959 243 94 85 chr10 74299300 74299748 -66017017 - MLT1J LTR MaLR -57 454 3 582 256 133 58 chr10 74299773 74299966 -66016799 - L1ME4a LINE L1 -217 5904 5727 1937 164 0 3 chr10 74299966 74300259 -66016506 - AluJb SINE Alu -16 296 5 582 256 133 58 chr10 74300259 74300425 -66016340 - L1ME4a LINE L1 -394 5727 5518 2189 114 3 19 chr10 74300430 74300747 -66016018 - AluSx SINE Alu 0 312 1 1778 108 29 108 chr10 74301093 74301435 -66015330 - AluYb8 SINE Alu -3 315 1 2116 189 46 58 chr10 74301472 74301865 -66014900 + MSTA LTR MaLR 1 390 -38 2280 113 0 10 chr10 74301865 74302175 -66014590 - AluSg SINE Alu -3 307 1 2116 189 46 58 chr10 74302175 74302214 -66014551 + MSTA LTR MaLR 390 428 0 4685 168 50 4 chr10 74302214 74303032 -66013733 + MSTA-int LTR MaLR 1 856 -795 1324 136 0 0 chr10 74303053 74303269 -66013496 + AluSg/x SINE Alu 96 311 0 4049 165 68 18 chr10 74303277 74303605 -66013160 + MSTA-int LTR MaLR 852 1162 -489 2343 108 0 6 chr10 74303605 74303919 -66012846 + AluSx SINE Alu 1 312 0 4049 165 68 18 chr10 74303919 74304352 -66012413 + MSTA-int LTR MaLR 1162 1651 0 1717 152 196 0 chr10 74304354 74304690 -66012075 + MSTA LTR MaLR 27 428 0 2277 110 3 0 chr10 74305491 74305800 -66010965 + AluSx SINE Alu 1 310 -2 1847 172 3 3 chr10 74306866 74307168 -66009597 + AluJo SINE Alu 1 302 -10 1008 162 85 18 chr10 74307211 74307446 -66009319 - MER21B LTR ERV1 -26 905 579 1367 214 24 63 chr10 74307468 74307800 -66008965 - MER21B LTR ERV1 -532 331 13 278 130 19 0 chr10 74308035 74308089 -66008676 - L1MA10 LINE L1 -1 6333 6279 405 44 0 88 chr10 74308091 74308104 -66008661 - L1P LINE L1 -765 5391 5378 3749 119 32 94 chr10 74308104 74308617 -66008148 - L1PB4 LINE L1 -1 6155 5697 2096 109 21 3 chr10 74308617 74308901 -66007864 - AluSq SINE Alu -24 289 1 3749 119 32 94 chr10 74308901 74309102 -66007663 - L1PB4 LINE L1 -459 5697 5485 405 44 0 88 chr10 74309102 74309156 -66007609 - L1P LINE L1 -778 5378 5330 210 37 0 0 chr10 74309159 74309186 -66007579 + (TC)n Simple_repeat Simple_repeat 2 28 0 1911 126 0 14 chr10 74309195 74309472 -66007293 - AluJb SINE Alu -39 273 1 753 231 47 63 chr10 74309690 74309715 -66007050 + MIR SINE MIR 11 35 -227 2198 108 3 0 chr10 74309715 74310003 -66006762 + AluY SINE Alu 1 289 -22 753 231 47 63 chr10 74310003 74310232 -66006533 + MIR SINE MIR 35 261 -1 1802 152 17 7 chr10 74310573 74310875 -66005890 - AluJo SINE Alu -7 305 1 863 280 59 43 chr10 74310929 74311115 -66005650 - L1MEd LINE L1 -5295 824 642 679 229 106 16 chr10 74311115 74311303 -66005462 - MER3 DNA MER1_type 0 209 5 863 280 59 43 chr10 74311303 74311487 -66005278 - L1MEd LINE L1 -5477 642 448 2022 130 13 10 chr10 74311978 74312286 -66004479 - AluSx SINE Alu -3 309 1 662 116 0 11 chr10 74312290 74312385 -66004380 - FLAM_A SINE Alu -16 126 33 1762 144 0 0 chr10 74312723 74312980 -66003785 + AluSx SINE Alu 44 300 -12 191 344 38 46 chr10 74314191 74314322 -66002443 - L2 LINE L2 -225 3047 2918 1355 222 62 19 chr10 74314520 74314844 -66001921 - L1ME2 LINE L1 -299 5865 5528 180 303 40 26 chr10 74315435 74315511 -66001254 - MIR SINE MIR -122 140 64 180 0 0 0 chr10 74316723 74316743 -66000022 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1681 155 7 21 chr10 74316746 74317030 -65999735 - AluJo SINE Alu -31 281 2 774 164 25 8 chr10 74319097 74319219 -65997546 - FLAM_A SINE Alu -9 124 1 1695 202 68 30 chr10 74319568 74319801 -65996964 - MLT1C LTR MaLR 0 467 244 2206 117 0 0 chr10 74319801 74320099 -65996666 - AluSg SINE Alu -12 298 1 2065 130 33 0 chr10 74320099 74320400 -65996365 - AluJb SINE Alu -1 311 1 1695 202 68 30 chr10 74320400 74320605 -65996160 - MLT1C LTR MaLR -222 245 11 2061 116 0 20 chr10 74320809 74321110 -65995655 - AluSx SINE Alu -17 295 1 924 157 13 25 chr10 74321120 74321279 -65995486 - FRAM SINE Alu -22 154 1 2141 106 3 26 chr10 74321452 74321754 -65995011 + AluSx SINE Alu 1 295 -17 1072 221 18 31 chr10 74321819 74322045 -65994720 + MER58A DNA MER1_type 2 224 0 1219 153 36 0 chr10 74323327 74323523 -65993242 - AluJo SINE Alu -24 288 86 1468 88 0 0 chr10 74323819 74324000 -65992765 + AluY SINE Alu 1 181 -130 829 90 21 42 chr10 74324161 74324305 -65992460 + AluY SINE Alu 157 297 -14 33 25 0 0 chr10 74325713 74325753 -65991012 + AT_rich Low_complexity Low_complexity 1 40 0 184 245 0 61 chr10 74325991 74326040 -65990725 - L3b LINE CR1 -19 1564 1519 267 178 0 0 chr10 74326081 74326126 -65990639 - L1MA10 LINE L1 -37 6297 6253 1692 192 10 3 chr10 74327346 74327653 -65989112 + AluJo SINE Alu 1 309 -3 683 122 61 88 chr10 74328419 74328567 -65988198 + MER1B DNA MER1_type 195 338 -1 500 193 67 0 chr10 74428927 74429046 -65887719 - L1M4 LINE L1 -1938 4208 4082 690 305 83 57 chr10 74429136 74429595 -65887170 - L1MEc LINE L1 -5865 531 61 1705 128 14 78 chr10 74429662 74430030 -65886735 - MER4A LTR ERV1 0 664 262 491 133 89 0 chr10 74430031 74430121 -65886644 - MER4A LTR ERV1 -566 98 1 354 259 237 7 chr10 74430132 74430271 -65886494 - L1MEd LINE L1 -5270 849 679 1564 220 9 14 chr10 74430579 74430929 -65885836 + MLT1A1 LTR MaLR 18 365 0 210 280 43 11 chr10 74430970 74431063 -65885702 + MIR3 SINE MIR 112 207 -1 450 287 88 6 chr10 74431656 74431837 -65884928 + MLT1J2 LTR MaLR 15 210 -240 539 295 106 18 chr10 74432006 74432233 -65884532 - MIR SINE MIR -2 260 14 2093 125 0 0 chr10 74432577 74432865 -65883900 + AluSx SINE Alu 24 311 -1 6796 68 11 5 chr10 74433425 74434446 -65882319 + L1PA7 LINE L1 5128 6154 0 1682 165 34 9 chr10 74434447 74434768 -65881997 - MLT1A1 LTR MaLR -28 337 9 233 281 182 8 chr10 74435580 74435701 -65881064 - MIR3 SINE MIR -49 159 18 2014 164 0 0 chr10 74435764 74436075 -65880690 + AluJb SINE Alu 1 311 -1 277 326 149 7 chr10 74436334 74436475 -65880290 + MIR SINE MIR 52 212 -50 1804 142 0 0 chr10 74436809 74437080 -65879685 - AluSx SINE Alu 0 307 37 265 363 22 0 chr10 74437252 74437343 -65879422 + MIR SINE MIR 31 123 -85 417 227 21 14 chr10 74437363 74437504 -65879261 + (TGG)n Simple_repeat Simple_repeat 1 142 0 271 171 12 24 chr10 74437523 74437605 -65879160 + (ATGGTG)n Simple_repeat Simple_repeat 1 81 0 280 197 33 0 chr10 74437644 74437705 -65879060 + MIR3 SINE MIR 145 207 -1 417 229 84 24 chr10 74438018 74438184 -65878581 - LTR33 LTR ERVL 0 521 346 1024 160 120 17 chr10 74438200 74438482 -65878283 - MLT2B1 LTR ERVL 0 520 202 1504 227 88 49 chr10 74438590 74438952 -65877813 + L1MC3 LINE L1 4946 4837 -1309 2211 135 3 0 chr10 74438952 74439263 -65877502 - AluSx SINE Alu 0 312 1 1504 227 88 49 chr10 74439263 74439855 -65876910 + L1MC3 LINE L1 4836 5403 -743 555 240 7 20 chr10 74439854 74440000 -65876765 + L1MA10 LINE L1 6184 6327 -7 * 1900 162 7 3 chr10 74440026 74440323 -65876442 + AluJb SINE Alu 1 298 -14 407 293 53 8 chr10 74441871 74442004 -65874761 + MER5B DNA MER1_type 1 139 -39 487 224 211 0 chr10 74442052 74442204 -65874561 + MER5A DNA MER1_type 6 189 0 2750 136 19 7 chr10 74442881 74443301 -65873464 + MSTB LTR MaLR 1 425 -1 817 255 43 14 chr10 74443623 74443831 -65872934 + MIR SINE MIR 36 249 -13 1981 169 0 6 chr10 74443868 74444182 -65872583 - AluSx SINE Alu 0 312 1 391 297 119 104 chr10 74445158 74445512 -65871253 + L2 LINE L2 2914 3272 0 599 304 42 29 chr10 74445553 74445793 -65870972 + L3 LINE CR1 1333 1575 -2 389 255 112 80 chr10 74446296 74446449 -65870316 - Charlie8 DNA MER1_type -2146 271 109 2361 107 0 0 chr10 74446449 74446759 -65870006 - AluSx SINE Alu -2 310 1 389 255 112 80 chr10 74446759 74446793 -65869972 - Charlie8 DNA MER1_type -2308 109 78 525 277 135 10 chr10 74447016 74447329 -65869436 + LTR16A LTR ERVL 21 362 -88 2433 192 89 15 chr10 74447714 74448255 -65868510 - MER119 DNA MER1_type -2 581 1 2430 92 0 3 chr10 74448486 74448792 -65867973 + AluSc SINE Alu 1 305 -4 624 209 78 7 chr10 74449294 74449447 -65867318 - Charlie1 DNA MER1_type -255 2506 2343 283 286 36 36 chr10 74449547 74449659 -65867106 - MIR SINE MIR -61 147 36 493 298 56 75 chr10 74449722 74450092 -65866673 - L1MEc LINE L1 -4651 1587 1212 4828 48 0 0 chr10 74450092 74450671 -65866094 + L1PA6 LINE L1 5576 6154 0 493 298 56 75 chr10 74450671 74450875 -65865890 - L1MEc LINE L1 -5026 1212 1063 2412 115 0 0 chr10 74450875 74451187 -65865578 - AluSx SINE Alu 0 312 1 493 298 56 75 chr10 74451187 74451275 -65865490 - L1MEc LINE L1 -5175 1063 975 1260 218 51 23 chr10 74451523 74451876 -65864889 - MLT1A2 LTR MaLR -11 363 1 1675 88 0 0 chr10 74452018 74452223 -65864542 + AluSg SINE Alu 1 205 -105 3104 176 191 107 chr10 74452584 74453168 -65863597 - L1MD3 LINE L1 -9 7986 7452 460 209 26 0 chr10 74453168 74453283 -65863482 - MLT1F1 LTR MaLR -449 118 1 3104 176 191 107 chr10 74453283 74453468 -65863297 - L1MD3 LINE L1 -543 7452 7284 1912 178 0 0 chr10 74453468 74453777 -65862988 + AluSx SINE Alu 1 309 -3 3104 176 191 107 chr10 74453777 74454184 -65862581 - L1MD3 LINE L1 -711 7284 6913 2379 124 94 8 chr10 74454184 74454578 -65862187 + MSTC LTR MaLR 1 428 0 3104 176 191 107 chr10 74454578 74454648 -65862117 - L1MD3 LINE L1 -1082 6913 6527 945 211 29 20 chr10 74454729 74454975 -65861790 - L1ME2 LINE L1 -44 6120 5873 1313 187 52 110 chr10 74454976 74455396 -65861369 - MLT1C LTR MaLR 0 467 1 2007 213 11 48 chr10 74455398 74455924 -65860841 - L1ME2 LINE L1 -304 5860 5354 265 122 41 0 chr10 74455925 74455974 -65860791 + LTR10B LTR ERV1 1 51 -496 2414 121 164 6 chr10 74455997 74456468 -65860297 + LTR10A LTR ERV1 1 545 -64 477 225 60 0 chr10 74456491 74456642 -65860123 - L1ME2 LINE L1 -797 5349 5190 632 137 29 0 chr10 74456643 74456745 -65860020 - AluJ SINE Alu -2 310 206 687 195 0 16 chr10 74456821 74456944 -65859821 - AluJ SINE Alu -107 205 85 1874 213 67 32 chr10 74456945 74457542 -65859223 - L1ME2 LINE L1 -944 5202 4585 602 79 10 40 chr10 74457542 74457643 -65859122 + MER4A LTR ERV1 1 98 -566 1824 117 9 22 chr10 74457643 74457993 -65858772 + MER4A LTR ERV1 261 664 0 776 246 170 7 chr10 74457994 74458283 -65858482 - L1ME2 LINE L1 -1559 4587 4252 3706 127 13 2 chr10 74458383 74458928 -65857837 + L1PA15 LINE L1 5613 6163 -2 582 41 0 0 chr10 74459900 74459973 -65856792 + (TG)n Simple_repeat Simple_repeat 2 74 0 191 319 88 19 chr10 74460059 74460219 -65856546 - MIR3 SINE MIR -22 186 16 291 54 0 0 chr10 74463347 74463384 -65853381 + (GGAGAA)n Simple_repeat Simple_repeat 3 39 0 1531 135 0 46 chr10 74464149 74464408 -65852357 + AluJo SINE Alu 29 275 -37 430 273 47 27 chr10 74464834 74464984 -65851781 + MIR3 SINE MIR 29 181 -27 189 225 0 0 chr10 74469729 74469769 -65846996 + MIR SINE MIR 73 112 -96 199 262 28 84 chr10 74470249 74470356 -65846409 - MIR3 SINE MIR -93 115 15 368 268 71 61 chr10 74471078 74471276 -65845489 + MIR SINE MIR 1 200 -62 1809 175 31 0 chr10 74471347 74471638 -65845127 + AluSx SINE Alu 1 300 -12 235 200 123 31 chr10 74471963 74472028 -65844737 + L2 LINE L2 3121 3191 -81 2075 159 0 7 chr10 74472082 74472390 -65844375 - AluJb SINE Alu -6 306 1 370 237 39 96 chr10 74472790 74472946 -65843819 + MIR SINE MIR 46 192 -70 1558 214 54 27 chr10 74473145 74473518 -65843247 - MLT1E LTR MaLR 0 593 211 297 226 16 0 chr10 74473545 74473607 -65843158 - MLT1E LTR MaLR -479 63 1 252 139 0 0 chr10 74473635 74473671 -65843094 + U2 snRNA snRNA 1 36 -152 534 57 0 0 chr10 74473724 74473794 -65842971 + (CA)n Simple_repeat Simple_repeat 2 71 0 342 0 0 0 chr10 74474406 74474444 -65842321 + (CA)n Simple_repeat Simple_repeat 1 38 0 245 253 120 0 chr10 74474696 74474771 -65841994 - MIR SINE MIR -131 131 48 611 229 42 52 chr10 74474785 74474977 -65841788 - L1MC5 LINE L1 -44 7917 7728 640 269 91 33 chr10 74475012 74475254 -65841511 + MIR SINE MIR 5 260 -2 482 266 127 9 chr10 74476067 74476296 -65840469 - MIR SINE MIR 0 262 7 418 138 202 0 chr10 74476752 74476846 -65839919 - MER81 DNA DNA 0 114 2 473 292 18 6 chr10 74477575 74477743 -65839022 - MIR3 SINE MIR -26 182 13 514 331 69 0 chr10 74478708 74478883 -65837882 + MIR SINE MIR 3 189 -73 396 303 130 10 chr10 74479068 74479375 -65837390 + L1ME4a LINE L1 5548 5891 -230 342 287 0 0 chr10 74479378 74479479 -65837286 + L1MEd LINE L1 11 111 -6008 410 36 0 0 chr10 74479688 74479744 -65837021 - AluSq SINE Alu -13 298 243 1548 103 15 5 chr10 74479745 74479949 -65836816 - AluSq SINE Alu -107 206 1 1111 245 155 19 chr10 74480444 74480888 -65835877 + MLT1C LTR MaLR 1 467 0 180 0 0 0 chr10 74481712 74481732 -65835033 + (TA)n Simple_repeat Simple_repeat 2 21 0 180 152 0 0 chr10 74482802 74482835 -65833930 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1766 172 50 0 chr10 74482876 74483173 -65833592 - AluSx SINE Alu 0 312 1 414 260 60 20 chr10 74483173 74483323 -65833442 - MIR SINE MIR -58 204 49 243 214 18 18 chr10 74483409 74483465 -65833300 + L2 LINE L2 3248 3303 -10 226 367 10 0 chr10 74484331 74484429 -65832336 + MIR SINE MIR 54 152 -56 2189 102 0 26 chr10 74484580 74484914 -65831851 + AluSq SINE Alu 1 313 0 222 319 0 0 chr10 74485843 74485915 -65830850 + L2 LINE L2 2990 3061 -211 612 271 20 68 chr10 74486080 74486331 -65830434 + MIR SINE MIR 4 242 -20 220 293 54 9 chr10 74487586 74487730 -65829035 + MIR SINE MIR 50 225 -37 314 279 0 137 chr10 74487934 74488043 -65828722 + MIR SINE MIR 31 107 -155 2707 39 7 3 chr10 74488043 74488352 -65828413 - AluY SINE Alu 0 311 2 314 279 0 137 chr10 74488352 74488425 -65828340 + MIR SINE MIR 107 188 -74 2068 132 94 32 chr10 74489657 74490060 -65826705 - MSTC LTR MaLR 0 428 1 190 240 147 0 chr10 74490447 74490522 -65826243 + MIR3 SINE MIR 109 194 -14 1719 172 7 21 chr10 74492687 74492997 -65823768 + AluJo SINE Alu 1 306 0 394 335 17 40 chr10 74493413 74493586 -65823179 + MIR SINE MIR 5 173 -89 220 323 21 42 chr10 74493613 74493709 -65823056 - MIR SINE MIR 0 262 169 2112 116 38 0 chr10 74494014 74494306 -65822459 - AluSg SINE Alu -7 303 1 304 252 243 43 chr10 74494884 74495094 -65821671 - L2 LINE L2 -1 3271 3020 246 356 9 9 chr10 74495114 74495229 -65821536 + L2 LINE L2 2985 3099 -173 1883 198 79 89 chr10 74496321 74496916 -65819849 + LTR1B LTR ERV1 238 826 0 334 302 47 17 chr10 74496920 74497092 -65819673 - L1MEd LINE L1 -5941 178 2 555 238 157 0 chr10 74498039 74498186 -65818579 - MER5A DNA MER1_type 0 189 20 392 212 59 123 chr10 74498231 74498401 -65818364 + MER5B DNA MER1_type 19 177 -1 244 309 229 20 chr10 74499450 74499651 -65817114 + MIR SINE MIR 1 243 -19 799 130 6 6 chr10 74499796 74499957 -65816808 + (TCCA)n Simple_repeat Simple_repeat 4 164 0 413 299 39 26 chr10 74500001 74500155 -65816610 - MER5A DNA MER1_type -33 156 1 219 93 139 0 chr10 74500168 74500211 -65816554 - MIR SINE MIR -62 146 98 189 353 0 0 chr10 74500759 74500827 -65815938 + MIR SINE MIR 33 100 -108 2105 99 31 20 chr10 74500921 74501215 -65815550 - AluSg SINE Alu -13 297 1 21 36 0 0 chr10 74501220 74501248 -65815517 + AT_rich Low_complexity Low_complexity 1 28 0 319 236 36 55 chr10 74501257 74501300 -65815465 + MER103 DNA DNA 1 43 -123 1154 225 101 30 chr10 74501300 74501736 -65815029 + MLT1C LTR MaLR 1 467 0 319 236 36 55 chr10 74501736 74501802 -65814963 + MER103 DNA DNA 43 108 -58 2386 75 0 0 chr10 74501834 74502146 -65814619 + AluY SINE Alu 1 312 0 750 243 154 0 chr10 74502638 74502852 -65813913 - MIR SINE MIR -13 249 3 194 350 12 0 chr10 74502891 74502971 -65813794 - L2 LINE L2 0 3313 3233 332 338 44 6 chr10 74503422 74503582 -65813183 - MIR SINE MIR -1 261 96 183 296 19 0 chr10 74503756 74503810 -65812955 + MIR SINE MIR 205 259 -3 180 299 147 6 chr10 74504087 74504244 -65812521 + L2 LINE L2 2885 3063 -209 294 29 0 0 chr10 74506417 74506452 -65810313 + (CA)n Simple_repeat Simple_repeat 2 36 0 382 257 19 146 chr10 74506744 74506950 -65809815 + MLT1K LTR MaLR 73 252 -336 758 212 422 30 chr10 74507285 74507851 -65808914 + LTR50 LTR ERVL 8 795 0 359 264 118 62 chr10 74507861 74508039 -65808726 - MER58A DNA MER1_type 0 224 37 235 323 16 63 chr10 74508161 74508288 -65808477 + MIR3 SINE MIR 87 207 -1 1330 255 17 20 chr10 74508322 74508679 -65808086 - LTR16A LTR ERVL -5 445 90 1753 132 36 67 chr10 74508699 74509086 -65807679 - THE1C LTR MaLR 0 375 1 883 301 60 52 chr10 74509330 74509948 -65806817 - ERVL LTR ERVL -441 5323 4701 356 355 0 0 chr10 74509971 74510109 -65806656 - ERVL LTR ERVL -886 4599 4462 842 316 209 11 chr10 74510580 74510933 -65805832 + L2 LINE L2 2006 2288 -1026 1916 129 186 21 chr10 74510933 74511321 -65805444 - LTR47A LTR ERVL 0 452 1 842 316 209 11 chr10 74511321 74511776 -65804989 + L2 LINE L2 2288 2974 -340 185 274 122 43 chr10 74511822 74511986 -65804779 + L2 LINE L2 3117 3293 -20 788 251 34 17 chr10 74511991 74512226 -65804539 - MIR SINE MIR -22 240 2 276 318 63 0 chr10 74512618 74512744 -65804021 - L3b LINE CR1 -194 1389 1256 443 250 23 30 chr10 74513103 74513235 -65803530 + MIR SINE MIR 18 148 -60 2000 128 0 67 chr10 74513478 74513791 -65802974 - AluSx SINE Alu -20 292 1 571 260 101 31 chr10 74513839 74514066 -65802699 - MIR SINE MIR -17 245 3 245 252 163 0 chr10 74514109 74514232 -65802533 + Charlie7 DNA MER1_type 2469 2611 -1 281 295 8 16 chr10 74514417 74514539 -65802226 - L1ME4a LINE L1 -53 6068 5948 315 49 0 0 chr10 74514547 74514588 -65802177 + (GA)n Simple_repeat Simple_repeat 2 42 0 601 269 57 17 chr10 74514614 74514815 -65801950 - L1ME4a LINE L1 -236 5885 5667 2111 132 0 7 chr10 74514815 74515111 -65801654 - AluSx SINE Alu -18 294 1 601 269 57 17 chr10 74515111 74515207 -65801558 - L1ME4a LINE L1 -454 5667 5576 405 326 8 0 chr10 74515706 74515835 -65800930 + MIR SINE MIR 65 194 -68 439 260 65 26 chr10 74516100 74516254 -65800511 - MIR SINE MIR -78 184 25 547 286 127 31 chr10 74516872 74517131 -65799634 - MER102a DNA MER1_type -15 315 32 330 271 22 122 chr10 74517174 74517355 -65799410 - MIR3 SINE MIR -20 188 26 4642 266 89 34 chr10 74518106 74519314 -65797451 - L1MEc LINE L1 -4266 2130 769 2053 128 106 69 chr10 74519314 74519750 -65797015 - LTR47A LTR ERVL 0 452 1 4642 266 89 34 chr10 74519750 74520528 -65796237 - L1MEc LINE L1 -5627 769 35 967 312 80 43 chr10 74520718 74521270 -65795495 + MLT1K LTR MaLR 5 576 -12 287 225 22 45 chr10 74521304 74521393 -65795372 + Charlie7 DNA MER1_type 6 92 -2520 229 288 54 54 chr10 74521469 74521580 -65795185 + L2 LINE L2 3162 3272 0 1195 136 0 0 chr10 74521695 74521871 -65794894 - AluSx SINE Alu -19 291 116 37 23 0 0 chr10 74521875 74521919 -65794846 + AT_rich Low_complexity Low_complexity 1 44 0 892 102 55 0 chr10 74521919 74522046 -65794719 - AluSx SINE Alu -178 134 1 190 296 150 80 chr10 74522121 74522561 -65794204 - L2 LINE L2 -669 2645 2175 261 21 21 42 chr10 74522887 74522935 -65793830 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2182 98 0 3 chr10 74522937 74523233 -65793532 - AluSg SINE Alu -15 295 1 235 302 193 19 chr10 74524396 74524608 -65792157 - MER113 DNA MER1_type? -85 436 188 522 0 0 0 chr10 74524996 74525003 -65791762 + (CA)n Simple_repeat Simple_repeat 1 65 0 522 0 0 0 chr10 74525003 74525061 -65791704 + (CA)n Simple_repeat Simple_repeat 2 59 0 182 368 23 60 chr10 74525749 74525882 -65790883 + L3 LINE CR1 431 558 -1019 431 287 42 14 chr10 74525905 74526048 -65790717 - MIR SINE MIR -114 148 2 1089 109 0 0 chr10 74526051 74526198 -65790567 + THE1C LTR MaLR 2 148 -227 3772 61 44 0 chr10 74526298 74527257 -65789508 - L1P3 LINE L1 -330 5824 4818 242 291 82 27 chr10 74527290 74527400 -65789365 + MIR SINE MIR 113 228 -34 213 293 217 30 chr10 74527414 74527718 -65789047 - L2 LINE L2 -3 3310 2950 582 288 87 40 chr10 74527748 74528307 -65788458 + MLT1L LTR MaLR 2 613 -2 290 327 20 0 chr10 74528434 74528535 -65788230 - L2 LINE L2 -613 2701 2599 224 261 70 99 chr10 74528687 74528829 -65787936 + MIR3 SINE MIR 6 143 -65 1666 177 43 107 chr10 74529422 74529862 -65786903 + MLT2D LTR ERVL 1 412 -2 404 291 92 18 chr10 74531478 74531663 -65785102 - MIR SINE MIR -46 216 24 193 329 0 0 chr10 74531952 74532022 -65784743 - MIR SINE MIR -61 201 132 366 265 41 0 chr10 74533072 74533170 -65783595 - Charlie8 DNA MER1_type -2246 171 70 200 383 104 0 chr10 74535362 74535477 -65781288 + MIR SINE MIR 88 214 -48 305 263 51 3 chr10 74536173 74536312 -65780453 + MIR SINE MIR 77 262 0 182 294 76 11 chr10 74536945 74537037 -65779728 + MIR SINE MIR 48 145 -117 794 150 0 0 chr10 74537524 74537637 -65779128 - AluSg SINE Alu -195 115 3 1363 102 0 31 chr10 74537637 74537833 -65778932 + AluSg/x SINE Alu 114 303 -7 2034 124 3 31 chr10 74538890 74539212 -65777553 + AluSq SINE Alu 1 313 0 264 281 67 76 chr10 74539460 74539684 -65777081 - L2 LINE L2 -75 3238 3017 201 253 165 51 chr10 74539961 74540040 -65776725 + MIR SINE MIR 99 186 -76 252 229 0 0 chr10 74541119 74541202 -65775563 + CT-rich Low_complexity Low_complexity 1 83 0 524 236 198 19 chr10 74541802 74542014 -65774751 - MIR SINE MIR 0 262 13 361 207 326 7 chr10 74542082 74542217 -65774548 + MER45A DNA AcHobo 1 178 0 296 338 28 0 chr10 74542838 74542983 -65773782 + MIR3 SINE MIR 60 208 0 381 248 41 16 chr10 74543124 74543245 -65773520 - MLT1K LTR MaLR -309 279 156 201 367 48 39 chr10 74543317 74543546 -65773219 + L2 LINE L2 3036 3266 -6 235 250 13 22 chr10 74543686 74543788 -65772977 - MLT1K LTR MaLR -28 587 482 7579 196 61 54 chr10 74543789 74545394 -65771371 - MER52A LTR ERV1 0 1755 139 237 222 4 13 chr10 74545764 74545839 -65770926 - MER52A LTR ERV1 -1218 71 4 403 340 84 57 chr10 74545843 74546281 -65770484 - MLT1K LTR MaLR -123 465 16 232 317 42 58 chr10 74546385 74546505 -65770260 + L2 LINE L2 3148 3265 -7 237 83 0 0 chr10 74548359 74548395 -65768370 + (CA)n Simple_repeat Simple_repeat 2 37 0 2344 85 0 3 chr10 74548613 74548920 -65767845 + AluSc SINE Alu 2 307 -2 441 199 31 68 chr10 74549300 74549334 -65767431 - MER69 DNA AcHobo -44 2482 2448 1983 154 3 0 chr10 74549334 74549645 -65767120 + AluJb SINE Alu 1 312 0 441 199 31 68 chr10 74549645 74549771 -65766994 - MER69 DNA AcHobo -78 2448 2328 715 223 35 28 chr10 74549896 74550245 -65766520 - MER69 DNA AcHobo -819 407 1 354 247 72 10 chr10 74550417 74550514 -65766251 + L2 LINE L2 3119 3221 -51 268 220 0 0 chr10 74551011 74551061 -65765704 + GA-rich Low_complexity Low_complexity 2 51 0 203 327 6 32 chr10 74551802 74551958 -65764807 + CT-rich Low_complexity Low_complexity 5 156 0 322 234 9 28 chr10 74552496 74552603 -65764162 + GA-rich Low_complexity Low_complexity 4 108 0 354 248 40 0 chr10 74553259 74553360 -65763405 + MIR3 SINE MIR 56 160 -48 301 326 0 0 chr10 74554052 74554144 -65762621 + MIR SINE MIR 123 214 -48 403 296 5 82 chr10 74554250 74554446 -65762319 - L2 LINE L2 -1 3312 3132 383 228 13 0 chr10 74554514 74554593 -65762172 + MLT1J LTR MaLR 230 309 -202 184 246 18 35 chr10 74554803 74554860 -65761905 + L2 LINE L2 3209 3264 -8 317 288 259 1 chr10 74555144 74555324 -65761441 + MIR SINE MIR 27 249 -13 1163 181 434 10 chr10 74555354 74555769 -65760996 + MLT1E LTR MaLR 1 591 -2 261 265 76 38 chr10 74555827 74555959 -65760806 - MIR SINE MIR -79 183 47 233 167 19 0 chr10 74556629 74556683 -65760082 + CT-rich Low_complexity Low_complexity 2 56 0 206 305 57 19 chr10 74557024 74557129 -65759636 - MER5B DNA MER1_type -68 110 2 215 120 300 0 chr10 74557575 74557625 -65759140 - MIR SINE MIR -113 149 85 1456 107 0 19 chr10 74558591 74558806 -65757959 + L1PA13 LINE L1 5952 6162 -1 200 281 0 31 chr10 74558936 74559000 -65757765 - MIR3 SINE MIR -21 187 126 193 263 53 0 chr10 74559275 74559332 -65757433 - MIR3 SINE MIR -20 188 129 419 294 129 13 chr10 74559371 74559674 -65757091 + L1MC4a LINE L1 5817 6154 -1654 1184 257 70 13 chr10 74559774 74560171 -65756594 - MER113 DNA MER1_type? -33 488 69 309 291 196 6 chr10 74560194 74560373 -65756392 - MIR SINE MIR -17 245 33 439 289 152 19 chr10 74561091 74561302 -65755463 + MIR SINE MIR 13 251 -11 225 238 90 49 chr10 74561603 74561729 -65755036 - MIR SINE MIR -30 178 41 497 296 109 0 chr10 74564357 74564577 -65752188 + MER113 DNA MER1_type? 272 515 -6 2446 66 3 0 chr10 74565329 74565630 -65751135 - AluSg SINE Alu -8 302 1 305 348 69 15 chr10 74566492 74566696 -65750069 - MIR SINE MIR -20 242 28 31 44 0 0 chr10 74567325 74567370 -65749395 + GC_rich Low_complexity Low_complexity 1 45 0 202 306 14 0 chr10 74567692 74567764 -65749001 + G-rich Low_complexity Low_complexity 2 74 0 181 100 75 0 chr10 74567775 74567815 -65748950 + GA-rich Low_complexity Low_complexity 3 45 0 195 204 23 0 chr10 74567940 74567984 -65748781 - L2 LINE L2 -87 3185 3141 207 274 96 0 chr10 74568403 74568476 -65748289 - L2 LINE L2 -14 3299 3220 211 306 16 0 chr10 74568723 74568785 -65747980 + MIR SINE MIR 199 261 -1 591 250 49 21 chr10 74568976 74569144 -65747621 - MER5B DNA MER1_type -7 182 1 321 256 120 45 chr10 74569841 74569974 -65746791 - MIR SINE MIR -100 162 20 566 27 0 14 chr10 74570646 74570719 -65746046 + (TAG)n Simple_repeat Simple_repeat 2 73 0 268 321 71 42 chr10 74571009 74571249 -65745516 - MLT1J LTR MaLR -130 381 135 7697 203 83 29 chr10 74571265 74571922 -65744843 - L1MDa LINE L1 -2826 3714 3094 1642 157 94 3 chr10 74571922 74572208 -65744557 - AluJo SINE Alu 0 312 1 7697 203 83 29 chr10 74572208 74574892 -65741873 - L1MDa LINE L1 -3446 3094 22 1519 266 80 47 chr10 74574923 74576081 -65740684 + L1ME3A LINE L1 4759 5961 -209 283 309 24 0 chr10 74576213 74576297 -65740468 + L1ME3A LINE L1 6029 6114 -56 535 224 189 0 chr10 74576391 74576534 -65740231 + MIR SINE MIR 18 187 -75 800 295 149 62 chr10 74578154 74578468 -65738297 + L1MC4a LINE L1 5877 6162 -1646 2620 159 21 21 chr10 74578468 74578895 -65737870 + MSTC LTR MaLR 1 427 -1 800 295 149 62 chr10 74578895 74579566 -65737199 + L1MC4a LINE L1 6162 6948 -860 3388 214 119 38 chr10 74579575 74580528 -65736237 - L1MCb LINE L1 -5015 1030 1 1941 241 128 25 chr10 74580613 74581212 -65735553 - MLT2F LTR ERVL -1 645 1 309 253 81 0 chr10 74581212 74581299 -65735466 + L1MC5 LINE L1 6993 7086 -875 236 247 41 14 chr10 74581312 74581385 -65735380 - MLT1F LTR MaLR -215 327 253 * 256 317 98 0 chr10 74581353 74581435 -65735330 - MLT1H LTR MaLR -229 320 231 3138 135 25 35 chr10 74581478 74581829 -65734936 - L1MC1 LINE L1 -5 6722 6376 2211 103 7 13 chr10 74581829 74582131 -65734634 - AluSx SINE Alu -12 300 1 3138 135 25 35 chr10 74582131 74582297 -65734468 - L1MC1 LINE L1 -351 6376 6210 234 62 0 0 chr10 74582297 74582329 -65734436 + (TTCC)n Simple_repeat Simple_repeat 3 34 0 836 196 0 0 chr10 74582336 74582469 -65734296 - FLAM_C SINE Alu 0 133 1 5258 196 29 5 chr10 74582469 74583345 -65733420 - L1MC1 LINE L1 -502 6225 5372 240 86 0 0 chr10 74583345 74583380 -65733385 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5258 196 29 5 chr10 74583380 74584242 -65732523 - L1MC1 LINE L1 -1355 5372 4446 2635 202 55 9 chr10 74584514 74585074 -65731691 - L1MD1 LINE L1 0 6502 5917 * 3346 232 32 27 chr10 74585069 74585539 -65731226 - L1MD1 LINE L1 -822 5584 5118 1737 162 42 0 chr10 74585539 74585823 -65730942 + AluJb SINE Alu 1 296 -16 3346 232 32 27 chr10 74585823 74586376 -65730389 - L1MD1 LINE L1 -1288 5118 4556 624 203 8 8 chr10 74586351 74586479 -65730286 - L1MD1 LINE L1 -5324 1085 958 * 878 198 6 0 chr10 74586473 74586635 -65730130 - L1M2 LINE L1 -5991 858 696 842 116 30 3 chr10 74586635 74586770 -65729995 - MSTA LTR MaLR 0 428 292 2910 184 16 2 chr10 74586770 74587266 -65729499 - L1M2 LINE L1 -6344 505 3 2621 237 46 38 chr10 74587280 74588061 -65728704 - L1M4 LINE L1 -1908 4238 3452 3415 213 83 71 chr10 74588070 74588158 -65728607 - L1MC1 LINE L1 -4564 1976 1891 1829 162 0 23 chr10 74588158 74588497 -65728268 - AluJb SINE Alu 0 312 1 3415 213 83 71 chr10 74588497 74588924 -65727841 - L1MC1 LINE L1 -4649 1891 1471 2204 98 0 7 chr10 74588924 74589211 -65727554 - AluSc SINE Alu -22 287 3 3415 213 83 71 chr10 74589211 74590179 -65726586 - L1MC1 LINE L1 -5069 1471 522 329 224 15 0 chr10 74590194 74590261 -65726504 - L1MC1 LINE L1 -6194 349 282 251 203 188 0 chr10 74590265 74590329 -65726436 + MLT1C LTR MaLR 8 83 -384 790 125 0 70 chr10 74590339 74590467 -65726298 - FLAM_A SINE Alu -10 123 5 2030 183 13 25 chr10 74590481 74590879 -65725886 + MLT1C LTR MaLR 75 467 0 531 296 1 1 chr10 74590879 74591017 -65725748 - L1MC1 LINE L1 -6263 280 19 308 333 8 0 chr10 74591136 74591253 -65725512 + HAL1 LINE L1 1759 1876 -631 207 100 0 0 chr10 74591811 74591841 -65724924 + (TA)n Simple_repeat Simple_repeat 2 31 0 1587 207 10 66 chr10 74592300 74592696 -65724069 - MLT1A2 LTR MaLR 0 374 1 1344 244 13 70 chr10 74593063 74593457 -65723308 + MLT1K LTR MaLR 4 374 -214 745 301 99 28 chr10 74593457 74593882 -65722883 - MLT1L LTR MaLR 0 615 161 812 250 50 14 chr10 74593911 74594131 -65722634 + MLT2C1 LTR ERVL 1 228 -169 1781 129 0 8 chr10 74594164 74594427 -65722338 - MER4E LTR ERV1 0 779 519 247 125 25 0 chr10 74594427 74594467 -65722298 + L1MD3 LINE L1 6961 7001 -994 348 191 0 0 chr10 74594467 74594530 -65722235 - MLT1A2 LTR MaLR -2 372 310 1409 118 0 19 chr10 74594530 74594741 -65722024 + AluSq SINE Alu 90 296 -17 242 158 0 0 chr10 74594742 74594780 -65721985 + L1P LINE L1 3887 3924 -2222 2723 155 6 10 chr10 74594880 74595365 -65721400 + L1P LINE L1 4183 4665 -1481 1751 174 0 4 chr10 74595366 74595647 -65721118 - AluJo SINE Alu -32 280 1 1391 252 100 60 chr10 74595657 74596111 -65720654 - LTR41 LTR ERVL -66 707 216 1621 174 40 64 chr10 74596111 74596485 -65720280 + MLT1A1 LTR MaLR 1 365 0 1391 252 100 60 chr10 74596485 74596700 -65720065 - LTR41 LTR ERVL -557 216 11 1243 228 59 33 chr10 74596722 74596915 -65719850 + L1M4 LINE L1 3656 3843 -2303 905 215 0 35 chr10 74596915 74597087 -65719678 + FAM SINE Alu 2 167 -8 1243 228 59 33 chr10 74597087 74597283 -65719482 + L1M4 LINE L1 3843 4055 -2091 695 264 32 68 chr10 74597319 74597539 -65719226 - LTR33A LTR ERVL -309 214 3 2052 111 3 54 chr10 74598828 74599144 -65717621 - AluSx SINE Alu -12 300 1 2288 113 0 0 chr10 74600074 74600374 -65716391 + AluSx SINE Alu 1 300 -12 2013 129 3 0 chr10 74600396 74600682 -65716083 + AluSq SINE Alu 1 287 -26 491 133 12 12 chr10 74701632 74701715 -65615050 - AluS SINE Alu -230 83 1 224 122 24 0 chr10 74701764 74701805 -65614960 + (TA)n Simple_repeat Simple_repeat 1 42 0 2023 131 24 3 chr10 74701851 74702149 -65614616 + AluSx SINE Alu 1 304 -8 2064 120 52 0 chr10 74703074 74703365 -65613400 + AluSx SINE Alu 1 306 -6 2524 40 40 0 chr10 74704946 74705245 -65611520 - AluY SINE Alu 0 311 1 186 43 0 0 chr10 74705315 74705338 -65611427 + (ATG)n Simple_repeat Simple_repeat 3 25 0 2163 119 7 0 chr10 74706246 74706541 -65610224 - AluSx SINE Alu -15 297 1 1908 164 0 19 chr10 74707211 74707529 -65609236 - AluJo SINE Alu 0 312 1 183 302 0 48 chr10 74707710 74707773 -65608992 - L2 LINE L2 -27 3245 3186 5170 165 18 30 chr10 74710112 74711291 -65605474 + L1MB5 LINE L1 5001 6173 -1 2518 73 0 0 chr10 74712018 74712320 -65604445 - AluSg SINE Alu -8 302 1 32 0 0 0 chr10 74714495 74714527 -65602238 + AT_rich Low_complexity Low_complexity 1 32 0 2374 97 0 0 chr10 74715638 74715948 -65600817 + AluSg SINE Alu 1 310 0 414 0 0 0 chr10 74716001 74716047 -65600718 + (TG)n Simple_repeat Simple_repeat 1 46 0 892 184 6 54 chr10 74716072 74716240 -65600525 - FRAM SINE Alu -6 160 1 1167 107 0 39 chr10 74716691 74716869 -65599896 - AluSg/x SINE Alu 0 312 142 1230 189 98 59 chr10 74717260 74717703 -65599062 + LTR37A LTR ERV1 7 423 -3 261 333 22 0 chr10 74717773 74717911 -65598854 + L1M1 LINE L1 5306 5446 -857 1592 185 11 25 chr10 74717911 74718197 -65598568 + AluJo SINE Alu 1 282 -30 249 57 0 0 chr10 74718203 74718238 -65598527 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1105 68 0 0 chr10 74718451 74718583 -65598182 + AluSg SINE Alu 3 134 -176 2523 71 0 0 chr10 74718583 74718893 -65597872 + AluY SINE Alu 1 310 -1 225 318 0 0 chr10 74719015 74719078 -65597687 + L1MEd LINE L1 280 342 -5777 2096 106 3 3 chr10 74719081 74719363 -65597402 + AluSx SINE Alu 1 282 -30 21 0 0 0 chr10 74719525 74719546 -65597219 + AT_rich Low_complexity Low_complexity 1 21 0 2234 92 7 14 chr10 74719619 74719914 -65596851 - AluSq SINE Alu -16 297 5 438 248 30 0 chr10 74720095 74720196 -65596569 - MER81 DNA DNA -1 113 10 33 56 0 0 chr10 74720495 74720549 -65596216 + AT_rich Low_complexity Low_complexity 1 54 0 2009 120 31 0 chr10 74721178 74721469 -65595296 + AluSq SINE Alu 1 300 -13 18385 44 0 4 chr10 74721690 74723919 -65592846 - L1P LINE L1 -3235 2911 690 6819 162 37 15 chr10 74724020 74725598 -65591167 + L1PB3 LINE L1 3888 5529 -625 2245 91 10 10 chr10 74725598 74725906 -65590859 + AluSp SINE Alu 1 308 -5 6819 162 37 15 chr10 74725906 74726538 -65590227 + L1PB3 LINE L1 5529 6146 -8 2129 107 31 0 chr10 74726538 74726828 -65589937 - AluSx SINE Alu -13 299 1 243 305 12 0 chr10 74726832 74726914 -65589851 + L1ME LINE L1 5740 5822 -299 247 346 0 0 chr10 74727577 74727658 -65589107 - Alu SINE Alu -5 295 215 4398 132 55 29 chr10 74727666 74727973 -65588792 + L1MA9 LINE L1 5509 5807 -505 2306 96 10 0 chr10 74727973 74728275 -65588490 + AluSq SINE Alu 1 305 -8 4398 132 55 29 chr10 74728275 74728738 -65588027 + L1MA9 LINE L1 5807 6299 -13 22 35 0 0 chr10 74729322 74729351 -65587414 + AT_rich Low_complexity Low_complexity 1 29 0 3296 159 68 35 chr10 74729733 74730439 -65586326 + L1MB3 LINE L1 5452 6180 -3 2469 87 0 7 chr10 74730549 74730859 -65585906 + AluSg SINE Alu 1 308 -2 836 143 32 0 chr10 74730888 74731014 -65585751 - AluJb SINE Alu -23 289 160 278 186 12 0 chr10 74731025 74731111 -65585654 + (TG)n Simple_repeat Simple_repeat 1 87 0 286 95 24 0 chr10 74731111 74731153 -65585612 - AluJb SINE Alu -173 129 87 276 100 0 0 chr10 74731166 74731206 -65585559 + (TG)n Simple_repeat Simple_repeat 2 41 0 868 122 8 0 chr10 74731206 74731329 -65585436 - AluJb SINE Alu -188 124 1 452 92 31 0 chr10 74731355 74731420 -65585345 + AluJ/FLAM SINE Alu 2 68 -244 858 189 40 0 chr10 74732194 74732342 -65584423 - AluJb SINE Alu -22 290 137 1660 145 87 14 chr10 74733312 74733588 -65583177 - AluJb SINE Alu -16 296 1 468 250 92 0 chr10 74733880 74734000 -65582765 - L2 LINE L2 0 3313 3183 1046 171 63 0 chr10 74734059 74734217 -65582548 - FAM SINE Alu -7 168 1 1442 92 0 10 chr10 74735337 74735543 -65581222 + AluY SINE Alu 1 204 -107 472 98 0 0 chr10 74735585 74735646 -65581119 - Alu SINE Alu -248 62 2 728 226 0 0 chr10 74735651 74735815 -65580950 - L1MCb LINE L1 -3769 2795 2632 2216 114 3 3 chr10 74735815 74736123 -65580642 - AluSq SINE Alu -4 309 2 2063 133 0 10 chr10 74736246 74736548 -65580217 - AluSx SINE Alu -13 299 1 340 248 50 92 chr10 74736599 74736817 -65579948 - L1MC4a LINE L1 -1834 5974 5766 2326 53 40 17 chr10 74736871 74737172 -65579593 + AluY SINE Alu 1 308 -3 459 265 5 112 chr10 74737461 74737586 -65579179 + MER5B DNA MER1_type 4 102 -76 1834 152 17 13 chr10 74737586 74737888 -65578877 - AluJo SINE Alu -9 303 1 459 265 5 112 chr10 74737888 74737958 -65578807 + MER5B DNA MER1_type 102 178 0 219 283 0 0 chr10 74738069 74738129 -65578636 + (TAG)n Simple_repeat Simple_repeat 3 62 0 900 239 82 101 chr10 74738469 74738554 -65578211 - MLT1J LTR MaLR -18 493 408 1415 173 32 67 chr10 74738554 74738866 -65577899 + AluJo SINE Alu 1 301 -11 2419 85 0 0 chr10 74738869 74739162 -65577603 + AluSc SINE Alu 1 293 -16 900 239 82 101 chr10 74739162 74739575 -65577190 - MLT1J LTR MaLR -105 406 1 375 136 18 136 chr10 74739650 74739760 -65577005 - L1MC2 LINE L1 -1 6343 6247 374 194 0 14 chr10 74739757 74739829 -65576936 - L1M4 LINE L1 -2343 3803 3733 * 4404 213 50 16 chr10 74739827 74741788 -65574977 - L1MCb LINE L1 -4504 2241 13 468 218 41 11 chr10 74741845 74741980 -65574785 - L1MC4a LINE L1 -442 5679 5535 1523 199 10 10 chr10 74742057 74742349 -65574416 - AluJb SINE Alu -20 292 1 541 263 0 9 chr10 74742682 74742796 -65573969 - MER81 DNA DNA -1 113 1 268 326 67 59 chr10 74743000 74743135 -65573630 + L2 LINE L2 3122 3257 -15 2407 97 0 0 chr10 74743279 74743577 -65573188 - AluSg SINE Alu -12 298 1 494 320 21 5 chr10 74743794 74743988 -65572777 - MER117 DNA MER1_type 0 197 1 192 40 0 0 chr10 74744214 74744239 -65572526 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 15097 23 0 0 chr10 74744246 74746674 -65570091 - L1PA3 LINE L1 -3 6152 3725 1257 178 8 106 chr10 74746944 74747002 -65569763 - MER8 DNA MER2_type 0 239 177 1704 113 116 22 chr10 74747002 74747277 -65569488 - AluSx SINE Alu -11 301 1 1257 178 8 106 chr10 74747277 74747291 -65569474 - MER8 DNA MER2_type -62 177 163 2223 118 7 0 chr10 74747291 74747587 -65569178 - AluSg SINE Alu -12 298 1 1257 178 8 106 chr10 74747587 74747777 -65568988 - MER8 DNA MER2_type -76 163 2 1974 153 7 0 chr10 74747781 74748076 -65568689 - AluSx SINE Alu -15 297 1 8847 148 123 51 chr10 74748275 74749911 -65566854 - MER52A LTR ERV1 0 1755 1 266 329 113 58 chr10 74750223 74750515 -65566250 - L2 LINE L2 -12 3260 2953 1428 196 50 37 chr10 74750548 74750930 -65565835 + L1M4 LINE L1 4807 5193 -953 557 149 32 0 chr10 74750909 74751003 -65565762 + L1MB8 LINE L1 5877 5973 -205 * 546 165 52 0 chr10 74751008 74751105 -65565660 + L1MB8 LINE L1 6072 6173 -5 855 236 14 83 chr10 74751205 74751481 -65565284 + AluJo SINE Alu 21 277 -35 397 162 68 34 chr10 74751481 74751509 -65565256 + L1M4 LINE L1 5175 5201 -945 2100 139 10 0 chr10 74751509 74751818 -65564947 + AluSx SINE Alu 1 312 0 397 162 68 34 chr10 74751818 74751906 -65564859 + L1M4 LINE L1 5201 5295 -851 * 665 224 82 0 chr10 74751904 74752074 -65564691 + L1PB4 LINE L1 5866 6049 -107 607 158 0 20 chr10 74752217 74752318 -65564447 - AluJ/FLAM SINE Alu -212 100 2 754 290 33 67 chr10 74752346 74752474 -65564291 - L2 LINE L2 -341 2973 2842 2431 77 0 3 chr10 74752474 74752774 -65563991 + AluY SINE Alu 1 299 -12 754 290 33 67 chr10 74752774 74752945 -65563820 - L2 LINE L2 -472 2842 2684 1029 168 30 44 chr10 74752945 74753148 -65563617 - MER20 DNA MER1_type 0 219 20 1975 127 23 16 chr10 74753194 74753327 -65563438 + AluSx SINE Alu 1 132 -180 2455 89 0 13 chr10 74753327 74753642 -65563123 + AluY SINE Alu 1 311 0 1975 127 23 16 chr10 74753642 74753815 -65562950 + AluSx SINE Alu 132 309 -3 1980 108 24 24 chr10 74753908 74754204 -65562561 + AluSx SINE Alu 1 296 -16 247 280 81 66 chr10 74754412 74754623 -65562142 - L2 LINE L2 -1001 2313 2100 887 136 71 0 chr10 74754893 74755047 -65561718 - MER5A DNA MER1_type -10 179 15 525 176 37 139 chr10 74755934 74756029 -65560736 + L1MC5 LINE L1 7609 7712 -249 2238 89 0 48 chr10 74756029 74756342 -65560423 + AluSx SINE Alu 1 298 -14 525 176 37 139 chr10 74756342 74756435 -65560330 + L1MC5 LINE L1 7712 7769 -192 1390 194 79 7 chr10 74756435 74756713 -65560052 + AluJb SINE Alu 1 298 -14 525 176 37 139 chr10 74756713 74756768 -65559997 + L1MC5 LINE L1 7769 7828 -133 2306 74 3 14 chr10 74756770 74757066 -65559699 + AluY SINE Alu 7 299 -12 343 307 55 31 chr10 74757125 74757252 -65559513 - L2 LINE L2 -25 3247 3118 826 296 180 26 chr10 74757252 74757712 -65559053 - L2 LINE L2 -5 3308 2782 321 238 43 70 chr10 74758163 74758348 -65558417 + L1MC5 LINE L1 7732 7911 -50 2454 75 0 13 chr10 74758495 74758803 -65557962 - AluY SINE Alu -3 308 5 487 240 67 109 chr10 74758812 74758987 -65557778 - MER112 DNA MER1_type 0 256 94 2245 98 7 0 chr10 74758987 74759284 -65557481 - AluSp SINE Alu -14 299 1 487 240 67 109 chr10 74759284 74759375 -65557390 - MER112 DNA MER1_type -162 94 1 264 266 138 87 chr10 74760025 74760243 -65556522 - L2 LINE L2 -47 3225 2997 551 313 89 80 chr10 74760314 74761018 -65555747 + L2 LINE L2 2247 2957 -357 866 108 0 0 chr10 74761018 74761129 -65555636 - HY1 scRNA scRNA -1 111 1 215 326 41 31 chr10 74761314 74761412 -65555353 + L2 LINE L2 3189 3287 -26 867 195 0 6 chr10 74761569 74761733 -65555032 + AluY SINE Alu 140 302 -9 620 252 179 49 chr10 74761760 74762066 -65554699 - L1ME4a LINE L1 -30 6091 5712 2047 99 6 57 chr10 74762066 74762380 -65554385 - AluSx SINE Alu -14 298 1 620 252 179 49 chr10 74762380 74762502 -65554263 - L1ME4a LINE L1 -409 5712 5607 1028 200 0 0 chr10 74762502 74762672 -65554093 - AluJb SINE Alu -12 300 131 1042 192 0 12 chr10 74762860 74763032 -65553733 + FAM SINE Alu 1 170 -5 1782 163 7 3 chr10 74763106 74763395 -65553370 + AluJb SINE Alu 1 290 -22 2493 81 3 0 chr10 74763499 74763808 -65552957 + AluSp SINE Alu 1 310 -3 358 82 0 0 chr10 74763808 74763857 -65552908 + AluSg/x SINE Alu 83 131 -169 2364 82 3 0 chr10 74763860 74764154 -65552611 + AluSg SINE Alu 1 295 -15 313 282 32 24 chr10 74764154 74764278 -65552487 - L1MC5 LINE L1 -581 7380 7256 182 274 202 24 chr10 74764317 74764401 -65552364 - L3 LINE CR1 -24 1553 1455 2083 124 20 0 chr10 74764401 74764699 -65552066 - AluSx SINE Alu -8 304 1 1765 153 33 43 chr10 74764819 74765119 -65551646 - AluJb SINE Alu -15 297 1 2354 76 13 3 chr10 74765129 74765432 -65551333 - AluSg SINE Alu -4 306 1 477 329 72 16 chr10 74765722 74766048 -65550717 - L1ME1 LINE L1 -288 5874 5529 375 261 45 9 chr10 74766072 74766183 -65550582 + MER5A DNA MER1_type 49 163 -26 337 310 62 16 chr10 74766085 74766214 -65550551 - MER5A DNA MER1_type -50 139 5 * 261 257 27 0 chr10 74766666 74766740 -65550025 + MIR3 SINE MIR 112 187 -21 2480 70 0 0 chr10 74766934 74767236 -65549529 - AluY SINE Alu -9 302 1 2079 106 58 0 chr10 74768809 74769101 -65547664 + AluSx SINE Alu 1 309 -3 639 290 81 36 chr10 74769371 74769592 -65547173 - L2 LINE L2 -12 3260 3030 2133 113 0 7 chr10 74769826 74770141 -65546624 + AluSx SINE Alu 1 313 0 2445 87 3 0 chr10 74770244 74770553 -65546212 - AluSg SINE Alu 0 310 1 1014 221 46 103 chr10 74770615 74770753 -65546012 - L1ME3A LINE L1 -225 5945 5801 2438 82 3 0 chr10 74770753 74771056 -65545709 - AluSp SINE Alu -9 304 1 1014 221 46 103 chr10 74771056 74771352 -65545413 - L1ME3A LINE L1 -369 5801 5536 1710 185 4 0 chr10 74771467 74771770 -65544995 - AluJo SINE Alu 0 304 1 560 316 91 47 chr10 74771770 74771924 -65544841 - MLT1I LTR MaLR -9 400 254 1374 188 34 45 chr10 74771924 74772216 -65544549 - AluJo SINE Alu -23 289 1 560 316 91 47 chr10 74772216 74772444 -65544321 - MLT1I LTR MaLR -155 254 1 775 249 113 54 chr10 74772446 74772716 -65544049 + L1MC/D LINE L1 4723 4975 -1264 1868 148 4 0 chr10 74772716 74772987 -65543778 + AluJo SINE Alu 12 283 -29 775 249 113 54 chr10 74772987 74773269 -65543496 + L1MC/D LINE L1 4975 5333 -906 2328 92 3 0 chr10 74773269 74773581 -65543184 + AluSp SINE Alu 1 306 -7 775 249 113 54 chr10 74773581 74773747 -65543018 + L1MC/D LINE L1 5333 5488 -751 626 166 39 66 chr10 74773756 74773937 -65542828 + AluJo SINE Alu 2 177 -135 1084 124 4 85 chr10 74774045 74774304 -65542461 - AluY SINE Alu -73 238 1 2047 213 42 30 chr10 74774478 74774854 -65541911 + L1MC5 LINE L1 7300 7687 -274 2479 48 7 3 chr10 74774854 74775145 -65541620 + AluY SINE Alu 1 292 -19 2047 213 42 30 chr10 74775145 74775393 -65541372 + L1MC5 LINE L1 7687 7931 -30 2272 80 0 58 chr10 74776030 74776355 -65540410 - AluY SINE Alu -5 306 1 692 184 0 0 chr10 74777559 74777673 -65539092 - FLAM_A SINE Alu -19 114 1 229 187 187 27 chr10 74778182 74778257 -65538508 + L1PBa LINE L1 807 893 -5970 23 0 0 0 chr10 74779580 74779603 -65537162 + AT_rich Low_complexity Low_complexity 1 23 0 2203 122 0 0 chr10 74779752 74780048 -65536717 + AluSx SINE Alu 1 296 -16 1534 154 47 50 chr10 74780362 74780661 -65536104 + AluJb SINE Alu 1 298 -14 2311 113 0 7 chr10 74780830 74781139 -65535626 + AluSg SINE Alu 2 308 -2 459 229 0 59 chr10 74781585 74781678 -65535087 + AluJo SINE Alu 26 113 -199 1763 144 72 0 chr10 74781678 74781968 -65534797 + AluSx SINE Alu 1 309 0 459 229 0 59 chr10 74781968 74781991 -65534774 + AluJo SINE Alu 113 136 -176 2317 80 7 7 chr10 74782123 74782422 -65534343 + AluY SINE Alu 1 299 -12 1015 132 35 0 chr10 74782429 74782573 -65534192 - FAM SINE Alu -16 169 21 2040 132 3 3 chr10 74783945 74784234 -65532531 - AluSx SINE Alu -23 289 1 378 130 28 0 chr10 74784255 74784330 -65532435 + Alu SINE Alu 1 55 -248 188 67 33 0 chr10 74784473 74784503 -65532262 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1233 300 53 31 chr10 74784513 74784674 -65532091 + L1ME3A LINE L1 5318 5474 -696 1674 179 10 14 chr10 74784674 74784971 -65531794 + AluJo SINE Alu 2 297 -15 1233 300 53 31 chr10 74784971 74785429 -65531336 + L1ME3A LINE L1 5474 5951 -219 1214 144 0 11 chr10 74785796 74785976 -65530789 - AluSg/x SINE Alu -1 309 132 228 361 67 8 chr10 74786316 74786435 -65530330 + L2 LINE L2 2922 3047 -225 32 0 0 0 chr10 74786435 74786467 -65530298 + AT_rich Low_complexity Low_complexity 1 32 0 748 178 0 0 chr10 74786467 74786585 -65530180 - FLAM_C SINE Alu -15 118 1 2487 81 0 7 chr10 74786795 74787103 -65529662 - AluSg SINE Alu -2 308 3 2602 47 0 31 chr10 74787238 74787555 -65529210 - AluY SINE Alu -4 307 1 1594 129 100 22 chr10 74787875 74788146 -65528619 - AluSx SINE Alu -20 292 1 1962 120 0 69 chr10 74788186 74788364 -65528401 - AluSx SINE Alu -15 297 149 2273 98 3 0 chr10 74788364 74788651 -65528114 - AluSp SINE Alu -25 288 1 1962 120 0 69 chr10 74788651 74788789 -65527976 - AluSx SINE Alu -163 149 3 1173 99 89 0 chr10 74788858 74789049 -65527716 + Tigger2 DNA MER2_type 1 208 -2510 767 191 64 0 chr10 74789056 74789197 -65527568 + Tigger2 DNA MER2_type 2568 2717 -1 2259 87 10 7 chr10 74789754 74790053 -65526712 + AluSc SINE Alu 5 304 -5 2357 64 7 0 chr10 74790158 74790440 -65526325 + AluSx SINE Alu 16 299 -13 1158 105 12 6 chr10 74790440 74790602 -65526163 + AluSg/x SINE Alu 132 294 -16 2318 93 0 13 chr10 74791286 74791597 -65525168 + AluSg1 SINE Alu 3 309 0 204 241 19 0 chr10 74791768 74791822 -65524943 - L3b LINE CR1 -174 1409 1355 829 188 32 97 chr10 74792743 74792820 -65523945 + L1MC5 LINE L1 7625 7705 -256 1634 174 67 0 chr10 74792820 74793090 -65523675 - AluJo SINE Alu -24 288 1 829 188 32 97 chr10 74793090 74793320 -65523445 + L1MC5 LINE L1 7705 7912 -49 2272 116 0 0 chr10 74795118 74795420 -65521345 - AluSx SINE Alu -10 302 1 581 248 44 48 chr10 74795430 74795441 -65521324 - MIR SINE MIR -57 205 195 189 0 0 0 chr10 74795441 74795462 -65521303 + (TG)n Simple_repeat Simple_repeat 2 22 0 581 248 44 48 chr10 74795462 74795500 -65521265 - MIR SINE MIR -67 195 158 1655 112 0 0 chr10 74795500 74795715 -65521050 - AluSg/x SINE Alu -14 296 82 581 248 44 48 chr10 74795715 74795870 -65520895 - MIR SINE MIR -104 158 1 787 193 80 11 chr10 74795886 74796073 -65520692 - MER105 DNA DNA -3 201 2 2320 79 7 0 chr10 74796813 74797104 -65519661 - AluY SINE Alu -18 293 1 2196 244 122 69 chr10 74797281 74797705 -65519060 - L2 LINE L2 0 3313 2913 2129 140 0 3 chr10 74797705 74798012 -65518753 + AluSx SINE Alu 1 306 -6 2196 244 122 69 chr10 74798012 74798563 -65518202 - L2 LINE L2 -400 2913 2226 240 143 0 0 chr10 74798563 74798598 -65518167 + MADE1 DNA Mariner 1 35 -45 2196 244 122 69 chr10 74798598 74798920 -65517845 - L2 LINE L2 -1087 2226 1923 21 57 0 0 chr10 74799021 74799056 -65517709 + AT_rich Low_complexity Low_complexity 1 35 0 7377 39 4 1 chr10 74799056 74800554 -65516211 - L1PA6 LINE L1 -13 6141 4635 1432 116 5 0 chr10 74800554 74800752 -65516013 - AluSx SINE Alu -54 258 60 407 286 42 24 chr10 74801071 74801284 -65515481 + L1ME2 LINE L1 5713 5929 -235 1605 151 66 40 chr10 74801296 74801600 -65515165 + AluJo SINE Alu 1 312 0 477 195 88 26 chr10 74802638 74802751 -65514014 - MER5A DNA MER1_type -40 149 30 2311 120 0 0 chr10 74802919 74803227 -65513538 + AluSg SINE Alu 1 308 -2 3310 170 102 55 chr10 74803288 74803701 -65513064 + L1MD2 LINE L1 5513 5905 -454 2155 106 0 0 chr10 74803701 74803984 -65512781 + AluSx SINE Alu 14 296 -16 3310 170 102 55 chr10 74803984 74804266 -65512499 + L1MD2 LINE L1 5905 6254 -105 2678 46 0 0 chr10 74804266 74804573 -65512192 + AluY SINE Alu 2 308 -3 3310 170 102 55 chr10 74804573 74804683 -65512082 + L1MD2 LINE L1 6254 6357 -2 1275 191 7 34 chr10 74805184 74805478 -65511287 - AluSx SINE Alu -14 298 13 313 336 16 16 chr10 74805535 74805692 -65511073 + CT-rich Low_complexity Low_complexity 1 157 0 204 211 40 0 chr10 74805719 74805795 -65510970 + CT-rich Low_complexity Low_complexity 1 79 0 285 312 0 11 chr10 74805821 74805914 -65510851 + CT-rich Low_complexity Low_complexity 2 93 0 1693 37 28 5 chr10 74806028 74806245 -65510520 + AluY SINE Alu 73 294 -17 2069 122 30 0 chr10 74807112 74807407 -65509358 - AluSx SINE Alu -8 304 1 1800 121 22 4 chr10 74808979 74809252 -65507513 - L1PA13 LINE L1 -21 6142 5865 710 149 0 0 chr10 74809265 74809372 -65507393 + U6 snRNA snRNA 1 107 0 965 186 28 40 chr10 74809372 74809613 -65507152 + L1MA9 LINE L1 6037 6274 -38 235 157 20 7 chr10 74809622 74809673 -65507092 + Alu SINE Alu 1 34 -265 1140 155 0 6 chr10 74809679 74809860 -65506905 + AluSg/x SINE Alu 125 304 -6 2294 99 0 19 chr10 74809867 74810179 -65506586 + AluSg SINE Alu 1 306 -4 2265 87 0 7 chr10 74810189 74810478 -65506287 + AluSc SINE Alu 1 287 -22 802 194 0 0 chr10 74810564 74810703 -65506062 - FLAM_C SINE Alu -2 141 3 2384 90 3 7 chr10 74810891 74811201 -65505564 - AluSc SINE Alu 0 309 1 204 213 66 66 chr10 74811387 74811448 -65505317 - L2 LINE L2 -1 3271 3211 2284 79 7 3 chr10 74811872 74812162 -65504603 + AluSx SINE Alu 1 291 -21 874 240 39 4 chr10 74813534 74813767 -65502998 + MIR SINE MIR 12 252 -10 2349 80 0 0 chr10 74813804 74814121 -65502644 - AluSq SINE Alu 0 317 1 2260 81 3 14 chr10 74814377 74814713 -65502052 + AluSg SINE Alu 1 333 0 226 252 37 28 chr10 74818485 74818592 -65498173 + T-rich Low_complexity Low_complexity 3 110 0 771 113 0 0 chr10 74819425 74819531 -65497234 - AluJb SINE Alu -7 305 200 2007 151 3 7 chr10 74819565 74819869 -65496896 + AluJb SINE Alu 2 304 -8 2375 92 0 7 chr10 74822506 74822809 -65493956 + AluSc SINE Alu 1 301 -8 287 297 47 61 chr10 74823203 74823351 -65493414 + MIR3 SINE MIR 60 205 -3 2384 97 3 0 chr10 74823522 74823830 -65492935 - AluSq SINE Alu -4 309 1 2313 94 7 7 chr10 74824010 74824307 -65492458 - AluSx SINE Alu -15 297 1 1841 178 3 16 chr10 74824464 74824779 -65491986 - AluJo SINE Alu -1 311 1 2351 103 0 0 chr10 74825974 74826285 -65490480 + AluY SINE Alu 1 311 0 229 285 133 26 chr10 74826669 74826820 -65489945 + MIR SINE MIR 71 237 -25 300 344 47 31 chr10 74826931 74827059 -65489706 + L2 LINE L2 3102 3231 -41 212 365 35 0 chr10 74827096 74827181 -65489584 - L2 LINE L2 -640 2674 2587 1998 128 17 3 chr10 74827480 74827768 -65488997 + AluJb SINE Alu 4 295 -17 3515 126 32 27 chr10 74828037 74828182 -65488583 - MER1A DNA MER1_type -2173 527 384 2068 107 10 7 chr10 74828182 74828473 -65488292 - AluSg SINE Alu -18 292 1 3515 126 32 27 chr10 74828473 74828851 -65487914 - MER1A DNA MER1_type -2316 384 1 240 238 71 16 chr10 74829605 74829731 -65487034 + L1ME4a LINE L1 5831 5963 -158 718 75 0 0 chr10 74829867 74829961 -65486804 + AluY SINE Alu 216 309 -2 455 290 149 78 chr10 74830467 74830863 -65485902 + L1MEd LINE L1 71 494 -5625 759 271 48 43 chr10 74830869 74831241 -65485524 + L1MEd LINE L1 2659 3032 -3097 3679 190 77 52 chr10 74831247 74832240 -65484525 + L1MDa LINE L1 26 1123 -5413 2090 142 3 0 chr10 74832240 74832549 -65484216 + AluSg SINE Alu 1 310 0 2059 135 0 0 chr10 74832553 74832854 -65483911 + AluSx SINE Alu 1 301 0 1874 127 47 33 chr10 74833167 74833467 -65483298 - AluSx SINE Alu -8 304 1 3030 190 116 6 chr10 74834234 74834897 -65481868 + L1MC4a LINE L1 7073 7808 0 1814 148 7 4 chr10 74834950 74835228 -65481537 - AluJo SINE Alu -16 296 18 310 115 0 0 chr10 74835437 74835489 -65481276 - Charlie5 DNA MER1_type -139 2473 2422 236 192 55 0 chr10 74836025 74836098 -65480667 - L1MC4 LINE L1 -1339 6703 6627 2339 82 7 13 chr10 74836209 74836515 -65480250 + AluSc SINE Alu 1 304 -5 1829 151 0 20 chr10 74836648 74836940 -65479825 + AluJo SINE Alu 1 286 -26 471 290 75 78 chr10 74836977 74837232 -65479533 - L3 LINE CR1 -6 1571 1318 17607 46 1 3 chr10 74837274 74839811 -65476954 + L1P2 LINE L1 3244 5776 -378 332 309 51 67 chr10 74839998 74840176 -65476589 + MIR3 SINE MIR 19 193 -15 2250 102 0 7 chr10 74840370 74840673 -65476092 + AluSq SINE Alu 1 301 -12 23 0 0 0 chr10 74841460 74841483 -65475282 + AT_rich Low_complexity Low_complexity 1 23 0 1690 140 79 0 chr10 74841811 74842089 -65474676 + AluJo SINE Alu 1 300 -12 2963 157 104 16 chr10 74842089 74842451 -65474314 + L1MB3 LINE L1 5215 5544 -634 796 178 0 22 chr10 74842451 74842586 -65474179 + FLAM_C SINE Alu 1 132 -1 2963 157 104 16 chr10 74842586 74843079 -65473686 + L1MB3 LINE L1 5544 6173 -5 186 296 19 0 chr10 74843128 74843182 -65473583 + L2 LINE L2 3214 3268 -4 198 380 20 10 chr10 74843241 74843341 -65473424 - L2 LINE L2 -665 2649 2549 277 140 0 70 chr10 74843873 74843930 -65472835 - L2 LINE L2 -94 3219 3167 2514 60 0 19 chr10 74843941 74844258 -65472507 - AluY SINE Alu 0 311 1 2079 106 58 0 chr10 74845831 74846123 -65470642 + AluSx SINE Alu 1 309 -3 588 306 82 36 chr10 74846393 74846612 -65470153 - L2 LINE L2 -12 3260 3032 1990 153 7 0 chr10 74847422 74847716 -65469049 - AluSx SINE Alu -16 296 1 21 0 0 0 chr10 74848755 74848776 -65467989 + AT_rich Low_complexity Low_complexity 1 21 0 1385 258 38 49 chr10 74848849 74849299 -65467466 + MLT1J2 LTR MaLR 2 446 -4 2323 103 0 3 chr10 74849500 74849810 -65466955 + AluSc SINE Alu 1 309 0 1970 117 4 4 chr10 74849819 74850092 -65466673 + AluSx SINE Alu 1 273 -39 580 335 80 26 chr10 74850455 74850768 -65465997 + MER102b DNA MER1_type 12 341 0 2257 89 4 0 chr10 74850940 74851255 -65465510 - AluSc SINE Alu 0 316 1 293 100 20 0 chr10 74851288 74851338 -65465427 + (CA)n Simple_repeat Simple_repeat 2 52 0 2274 104 0 7 chr10 74851545 74851853 -65464912 - AluSx SINE Alu -6 306 1 373 136 26 29 chr10 74851853 74851958 -65464807 + MSTD LTR MaLR 210 403 -54 237 110 76 179 chr10 74851946 74852091 -65464674 + MER113 DNA MER1_type? 87 216 -305 * 181 333 17 17 chr10 74852171 74852231 -65464534 + MIR SINE MIR 6 65 -197 1801 129 0 63 chr10 74852231 74852533 -65464232 - AluJb SINE Alu -9 303 21 367 268 88 21 chr10 74852578 74852772 -65463993 - L1MC4a LINE L1 -1547 6261 6055 914 228 155 61 chr10 74852803 74852877 -65463888 - L1MC4a LINE L1 -1828 5980 5914 2220 115 0 0 chr10 74852877 74853173 -65463592 - AluSg SINE Alu -13 297 2 914 228 155 61 chr10 74853173 74853257 -65463508 - L1MC4a LINE L1 -1894 5914 5839 1854 162 3 10 chr10 74853257 74853571 -65463194 + AluJo SINE Alu 1 312 0 914 228 155 61 chr10 74853571 74853823 -65462942 - L1MC4a LINE L1 -1969 5839 5530 557 272 36 0 chr10 74853853 74854058 -65462707 + MIR SINE MIR 74 261 -1 780 245 37 41 chr10 74854411 74854705 -65462060 + L1MC5 LINE L1 7604 7896 -65 189 0 0 0 chr10 74854760 74854781 -65461984 + (TA)n Simple_repeat Simple_repeat 2 22 0 901 116 62 0 chr10 74854889 74855018 -65461747 + AluSq/x SINE Alu 1 137 -175 2014 117 24 0 chr10 74855018 74855308 -65461457 + AluY SINE Alu 1 297 -14 2189 104 10 10 chr10 74855308 74855606 -65461159 + AluSx SINE Alu 1 298 -14 2323 95 3 3 chr10 74856001 74856307 -65460458 - AluSq SINE Alu -7 306 1 1832 158 3 7 chr10 74856634 74856918 -65459847 - AluJo SINE Alu -25 287 5 2113 128 7 0 chr10 74857138 74857428 -65459337 - AluSx SINE Alu -20 292 1 231 36 0 0 chr10 74858192 74858220 -65458545 + (TA)n Simple_repeat Simple_repeat 2 29 0 1870 130 14 4 chr10 74858222 74858499 -65458266 - AluSx SINE Alu -32 280 1 222 37 0 0 chr10 74858508 74858535 -65458230 + (A)n Simple_repeat Simple_repeat 1 27 0 2341 95 0 0 chr10 74858946 74859250 -65457515 + AluSx SINE Alu 1 304 -8 2108 97 4 7 chr10 74859365 74859644 -65457121 + AluSc SINE Alu 18 295 -14 1806 145 16 35 chr10 74859686 74859996 -65456769 + AluJo SINE Alu 1 304 -8 720 300 56 38 chr10 74860346 74860560 -65456205 + L1ME LINE L1 5294 5517 -604 4186 156 36 52 chr10 74860560 74861355 -65455410 - LTR39 LTR ERV1 0 783 1 720 300 56 38 chr10 74861355 74861543 -65455222 + L1ME LINE L1 5517 5700 -421 606 306 38 34 chr10 74861561 74861796 -65454969 + MIR SINE MIR 1 236 -26 227 248 38 29 chr10 74861812 74861917 -65454848 + L1ME LINE L1 5776 5881 -240 21 82 0 0 chr10 74861920 74861969 -65454796 + AT_rich Low_complexity Low_complexity 1 49 0 435 77 15 15 chr10 74862203 74862268 -65454497 - LTR35 LTR ERV1 -553 65 1 1208 167 48 13 chr10 74862268 74862496 -65454269 - MSTB LTR MaLR -150 276 41 243 127 36 55 chr10 74862499 74862554 -65454211 - Alu SINE Alu 0 302 249 309 185 0 0 chr10 74862554 74862608 -65454157 - MSTB LTR MaLR -372 54 1 1049 237 31 15 chr10 74862633 74862961 -65453804 + L1MEd LINE L1 1300 1603 -4781 1330 130 5 5 chr10 74862997 74863189 -65453576 + AluSx SINE Alu 1 192 -120 443 263 15 44 chr10 74863416 74863526 -65453239 - L2 LINE L2 -1219 2095 1988 2207 96 3 16 chr10 74863526 74863829 -65452936 + AluY SINE Alu 1 299 -12 443 263 15 44 chr10 74863829 74863855 -65452910 - L2 LINE L2 -1326 1988 1963 343 307 55 31 chr10 74863888 74864015 -65452750 - L2 LINE L2 -25 3247 3118 826 296 180 26 chr10 74864015 74864475 -65452290 - L2 LINE L2 -5 3308 2782 286 174 58 29 chr10 74866064 74866133 -65450632 + MER20 DNA MER1_type 67 137 -82 334 138 12 88 chr10 74866240 74866320 -65450445 + MER20 DNA MER1_type 137 210 -9 828 154 0 0 chr10 74866429 74866546 -65450219 + FLAM_C SINE Alu 2 118 -15 2283 75 4 4 chr10 74867564 74867874 -65448891 + AluSc SINE Alu 1 310 0 186 43 0 0 chr10 74870278 74870301 -65446464 + (CCCCCG)n Simple_repeat Simple_repeat 5 27 0 25 0 0 0 chr10 74871474 74871499 -65445266 + AT_rich Low_complexity Low_complexity 1 25 0 1887 141 0 25 chr10 74871542 74871861 -65444904 + AluJb SINE Alu 1 311 -1 2370 60 10 7 chr10 74872846 74873144 -65443621 - AluSq SINE Alu -14 299 1 2237 99 3 0 chr10 74874133 74874452 -65442313 - AluSp SINE Alu 0 320 1 2072 99 3 93 chr10 74874670 74874809 -65441956 + AluSx SINE Alu 1 151 -161 2499 69 13 0 chr10 74874809 74875113 -65441652 + AluSg SINE Alu 1 308 -2 2072 99 3 93 chr10 74875113 74875316 -65441449 + AluSx SINE Alu 151 312 0 180 0 0 0 chr10 74875391 74875411 -65441354 + (GGGAGA)n Simple_repeat Simple_repeat 3 22 0 1694 98 20 8 chr10 74875606 74875898 -65440867 + AluSg SINE Alu 36 330 0 226 252 37 28 chr10 74879669 74879776 -65436989 + T-rich Low_complexity Low_complexity 3 110 0 813 113 0 0 chr10 74880608 74880714 -65436051 - AluJb SINE Alu -7 305 200 1992 151 3 7 chr10 74880748 74881052 -65435713 + AluJb SINE Alu 2 304 -8 2358 92 0 7 chr10 74883689 74883992 -65432773 + AluSc SINE Alu 1 301 -8 330 313 44 56 chr10 74884374 74884534 -65432231 + MIR3 SINE MIR 48 205 -3 2363 97 3 0 chr10 74884705 74885013 -65431752 - AluSq SINE Alu -4 309 1 2414 78 0 3 chr10 74885193 74885489 -65431276 - AluSg SINE Alu -15 295 1 370 82 5 18 chr10 74885489 74885541 -65431224 - AluSq/x SINE Alu -169 133 90 2489 81 3 0 chr10 74885541 74885850 -65430915 - AluSp SINE Alu -3 310 1 180 363 76 52 chr10 74885864 74886115 -65430650 + L2 LINE L2 318 574 -2740 1892 149 10 0 chr10 74886134 74886422 -65430343 + AluSx SINE Alu 1 291 -21 1684 143 4 0 chr10 74886511 74886756 -65430009 + AluSq SINE Alu 1 246 -67 513 138 0 101 chr10 74886860 74886894 -65429871 - L1M4 LINE L1 -553 5631 5595 1944 115 3 49 chr10 74886894 74887199 -65429566 - AluSx SINE Alu -21 291 1 513 138 0 101 chr10 74887199 74887273 -65429492 - L1M4 LINE L1 -589 5595 5534 2886 165 92 0 chr10 74887331 74887877 -65428888 + LTR31 LTR ERV1 9 604 -15 1183 179 44 10 chr10 74887882 74888239 -65428526 - L1M4 LINE L1 -658 5520 5154 2538 70 0 0 chr10 74888267 74888569 -65428196 + AluY SINE Alu 1 302 -9 4735 122 51 7 chr10 74888580 74888923 -65427842 - L1MA6 LINE L1 -6 6294 5968 2114 117 7 13 chr10 74888923 74889222 -65427543 + AluSx SINE Alu 1 297 -15 4735 122 51 7 chr10 74889222 74889608 -65427157 - L1MA6 LINE L1 -332 5968 5533 559 213 0 0 chr10 74889608 74889702 -65427063 + Tigger3b DNA MER2_type 9 102 -1129 * 1822 93 75 85 chr10 74889700 74889950 -65426815 + Tigger3b DNA MER2_type 274 525 -2503 1799 161 13 3 chr10 74889950 74890248 -65426517 - AluJo SINE Alu -11 301 1 1822 93 75 85 chr10 74890248 74890288 -65426477 + Tigger3b DNA MER2_type 525 564 -2464 2004 97 4 4 chr10 74890288 74890590 -65426175 - AluY SINE Alu 0 317 16 1822 93 75 85 chr10 74890590 74890673 -65426092 + Tigger3b DNA MER2_type 564 645 -586 683 146 0 6 chr10 74890697 74890943 -65425822 + AluJb SINE Alu 1 297 -15 2545 140 50 7 chr10 74890944 74891366 -65425399 + Tigger3b DNA MER2_type 712 1151 -81 861 114 31 104 chr10 74891366 74891582 -65425183 - L1MA6 LINE L1 -743 5403 5225 * 3591 140 52 5 chr10 74891578 74892206 -65424559 + L1 LINE L1 3996 4653 -1493 2200 159 14 66 chr10 74892200 74892698 -65424067 - L1M4 LINE L1 -1113 5033 4562 * 722 102 102 39 chr10 74893079 74893207 -65423558 + AluSc SINE Alu 170 305 -4 2088 128 17 0 chr10 74893207 74893504 -65423261 + AluSx SINE Alu 1 302 -10 27 62 0 0 chr10 74893869 74893917 -65422848 + AT_rich Low_complexity Low_complexity 1 48 0 1896 229 147 113 chr10 74893987 74895046 -65421719 - L1MC4 LINE L1 -3 8039 6945 569 207 24 67 chr10 74895064 74895243 -65421522 - L1ME3A LINE L1 -291 5873 5700 187 217 50 50 chr10 74896224 74896284 -65420481 - L2 LINE L2 -3 3269 3210 346 219 186 10 chr10 74896453 74896550 -65420215 - MIR SINE MIR -65 143 31 284 332 37 47 chr10 74896636 74896826 -65419939 - L2 LINE L2 -223 3049 2862 1911 127 0 4 chr10 74897153 74897429 -65419336 - AluSx SINE Alu -12 300 26 288 248 107 33 chr10 74897443 74897564 -65419201 - MIR SINE MIR -113 149 20 1939 145 3 23 chr10 74897636 74897946 -65418819 + AluJo SINE Alu 1 304 -8 345 317 31 31 chr10 74898621 74898782 -65417983 + L2 LINE L2 2584 2744 -570 216 0 0 0 chr10 74898782 74898806 -65417959 + (TAA)n Simple_repeat Simple_repeat 2 25 0 989 241 21 21 chr10 74898818 74899054 -65417711 - MIR SINE MIR -12 250 15 453 344 135 30 chr10 74899125 74899526 -65417239 + L2 LINE L2 2827 3269 -3 180 0 0 0 chr10 74900098 74900118 -65416647 + (TCTCCC)n Simple_repeat Simple_repeat 3 22 0 1235 135 5 0 chr10 74900193 74900378 -65416387 - AluSg/x SINE Alu 0 310 125 2521 61 13 10 chr10 74900394 74900705 -65416060 - AluSx SINE Alu 0 312 1 1782 163 7 3 chr10 74900809 74901098 -65415667 - AluJb SINE Alu -22 290 1 1042 192 0 12 chr10 74901172 74901344 -65415421 - FAM SINE Alu -5 170 1 1028 200 0 0 chr10 74901532 74901702 -65415063 + AluJb SINE Alu 131 300 -12 620 252 179 49 chr10 74901702 74901824 -65414941 + L1ME4a LINE L1 5607 5712 -409 2047 99 6 57 chr10 74901824 74902138 -65414627 + AluSx SINE Alu 1 298 -14 620 252 179 49 chr10 74902138 74902444 -65414321 + L1ME4a LINE L1 5712 6091 -30 1209 155 0 15 chr10 74902471 74902671 -65414094 - AluSg/x SINE Alu -9 301 105 1006 179 7 125 chr10 74902800 74902923 -65413842 - AluYb8 SINE Alu -71 247 111 1966 87 62 21 chr10 74902923 74903212 -65413553 - L1PA10 LINE L1 0 6168 5868 1006 179 7 125 chr10 74903212 74903228 -65413537 - AluYb8 SINE Alu -207 111 95 2155 104 33 0 chr10 74903228 74903527 -65413238 - AluSx SINE Alu -3 309 1 1006 179 7 125 chr10 74903527 74903666 -65413099 - AluYb8 SINE Alu -223 95 1 1547 182 52 0 chr10 74903666 74903952 -65412813 - AluJo SINE Alu -11 301 1 24 0 0 0 chr10 74903952 74903976 -65412789 + AT_rich Low_complexity Low_complexity 1 24 0 1352 123 44 85 chr10 74903976 74904202 -65412563 - L1MA2 LINE L1 -6 6298 6085 1956 132 3 26 chr10 74904202 74904512 -65412253 - AluSx SINE Alu -1 311 9 1352 123 44 85 chr10 74904512 74904578 -65412187 - L1MA2 LINE L1 -219 6085 6018 27 0 0 0 chr10 74904767 74904794 -65411971 + AT_rich Low_complexity Low_complexity 1 27 0 2125 129 3 3 chr10 74905003 74905313 -65411452 - AluSq SINE Alu -3 310 1 1436 158 42 25 chr10 74905380 74905665 -65411100 - AluJb SINE Alu -11 301 12 2041 128 30 7 chr10 74905690 74905995 -65410770 - AluSx SINE Alu 0 312 1 1267 109 0 0 chr10 74906133 74906298 -65410467 + AluSg/x SINE Alu 136 300 -10 688 219 0 0 chr10 74906736 74906859 -65409906 - FLAM_A SINE Alu -10 123 1 1843 181 3 3 chr10 74908795 74909105 -65407660 - AluJb SINE Alu -2 310 1 628 280 81 25 chr10 74909162 74909483 -65407282 - L1ME4a LINE L1 -166 5955 5617 821 237 109 5 chr10 74909503 74909714 -65407051 - MIR SINE MIR -16 246 14 2326 93 0 7 chr10 74910102 74910403 -65406362 - AluSx SINE Alu -11 301 3 1696 165 14 14 chr10 74910585 74910876 -65405889 + AluJb SINE Alu 5 295 -17 21 36 0 0 chr10 74911018 74911046 -65405719 + AT_rich Low_complexity Low_complexity 1 28 0 619 251 192 0 chr10 74911147 74911366 -65405399 + MIR SINE MIR 2 262 0 509 267 30 0 chr10 74911468 74911599 -65405166 - L2 LINE L2 0 3313 3179 1773 147 0 37 chr10 74912004 74912304 -65404461 + AluSx SINE Alu 5 293 -19 2353 82 7 0 chr10 74912399 74912692 -65404073 + AluSq SINE Alu 1 295 -18 2142 103 20 3 chr10 74913066 74913368 -65403397 - AluSx SINE Alu -5 307 1 226 268 0 0 chr10 74913532 74913588 -65403177 - Charlie8 DNA MER1_type -989 1428 1373 2036 141 3 3 chr10 74914221 74914527 -65402238 - AluSx SINE Alu -6 306 1 458 237 135 17 chr10 74914735 74914940 -65401825 - L1MD2 LINE L1 -26 6143 5931 180 0 0 0 chr10 74914940 74914960 -65401805 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 458 237 135 17 chr10 74914960 74914980 -65401785 - L1MD2 LINE L1 -238 5931 5915 21 0 0 0 chr10 74916106 74916127 -65400638 + AT_rich Low_complexity Low_complexity 1 21 0 1775 145 7 4 chr10 74917199 74917475 -65399290 - AluSx SINE Alu -31 281 5 288 328 115 0 chr10 74918208 74918330 -65398435 - MIR SINE MIR -99 163 28 29 28 0 0 chr10 74919188 74919224 -65397541 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 74919670 74919698 -65397067 + AT_rich Low_complexity Low_complexity 1 28 0 203 287 46 23 chr10 74920532 74920619 -65396146 - MIR3 SINE MIR -1 207 119 292 343 155 0 chr10 74920642 74920823 -65395942 - L3b LINE CR1 -273 1310 1102 800 242 0 0 chr10 74921167 74921328 -65395437 - FRAM SINE Alu -18 158 1 853 219 0 0 chr10 74921367 74921518 -65395247 + FAM SINE Alu 20 170 -15 761 193 46 54 chr10 74921526 74921778 -65394987 - L1MC5 LINE L1 -44 7917 7666 1862 138 3 52 chr10 74921778 74922083 -65394682 - AluSx SINE Alu -14 298 9 761 193 46 54 chr10 74922083 74922110 -65394655 - L1MC5 LINE L1 -295 7666 7640 2206 103 0 10 chr10 74922513 74922803 -65393962 + AluSg SINE Alu 1 287 -23 2250 78 25 0 chr10 74922810 74923094 -65393671 + AluY SINE Alu 1 291 -20 532 262 40 8 chr10 74923325 74923451 -65393314 - L2 LINE L2 -4 3309 3180 2450 41 7 7 chr10 74923483 74923773 -65392992 + AluY SINE Alu 1 290 -21 202 347 46 63 chr10 74923803 74924042 -65392723 - L2 LINE L2 -1037 2277 2043 2198 98 0 39 chr10 74924170 74924476 -65392289 + AluSg SINE Alu 1 294 -16 31 68 0 0 chr10 74925536 74925595 -65391170 + AT_rich Low_complexity Low_complexity 1 59 0 805 142 0 37 chr10 74925790 74925924 -65390841 + FLAM_C SINE Alu 1 129 -14 307 267 112 99 chr10 74925998 74926320 -65390445 - L1M4 LINE L1 -465 5719 5394 2653 36 0 3 chr10 74926634 74926939 -65389826 - AluYa5 SINE Alu -7 304 1 816 213 12 0 chr10 74927054 74927214 -65389551 - AluSg/x SINE Alu -12 298 137 308 307 158 51 chr10 74927353 74927764 -65389001 - L1M4 LINE L1 -1901 4245 3791 278 327 135 0 chr10 74927817 74927921 -65388844 + MIR3 SINE MIR 68 185 -23 2220 101 0 7 chr10 74928550 74928846 -65387919 + AluSx SINE Alu 1 294 -18 430 234 65 19 chr10 74930606 74930713 -65386052 + MIR3 SINE MIR 90 201 -7 2170 119 16 0 chr10 74932250 74932553 -65384212 + AluSx SINE Alu 1 308 -4 2274 97 0 3 chr10 74932603 74932893 -65383872 + AluSc SINE Alu 1 289 -20 2033 150 0 7 chr10 74933570 74933876 -65382889 - AluSx SINE Alu -8 304 1 970 176 0 57 chr10 74934221 74934397 -65382368 + FRAM SINE Alu 1 166 0 2351 129 30 6 chr10 74934398 74934761 -65382004 - MSTA LTR MaLR -56 372 1 3436 175 247 25 chr10 74934761 74935077 -65381688 - MSTA-int LTR MaLR 0 1651 1407 1979 142 3 7 chr10 74935077 74935373 -65381392 - AluSx SINE Alu -12 300 6 3436 175 247 25 chr10 74935373 74935939 -65380826 - MSTA-int LTR MaLR -244 1407 602 207 0 0 0 chr10 74936255 74936278 -65380487 + (T)n Simple_repeat Simple_repeat 1 23 0 3081 159 62 38 chr10 74936555 74937035 -65379730 - L1MB8 LINE L1 0 6178 5711 2377 83 7 0 chr10 74937035 74937337 -65379428 - AluY SINE Alu -7 304 1 3081 159 62 38 chr10 74937337 74937451 -65379314 - L1MB8 LINE L1 -467 5711 5566 2249 99 3 3 chr10 74937451 74937755 -65379010 - AluSp SINE Alu -8 305 2 3081 159 62 38 chr10 74937755 74937793 -65378972 - L1MB8 LINE L1 -612 5566 5530 897 184 16 27 chr10 74937935 74938120 -65378645 + AluJb SINE Alu 114 296 -16 22 0 0 0 chr10 74939237 74939259 -65377506 + AT_rich Low_complexity Low_complexity 1 22 0 828 151 0 0 chr10 74940206 74940352 -65376413 + CT-rich Low_complexity Low_complexity 2 147 0 1206 156 113 91 chr10 74940387 74940662 -65376103 - AluJo SINE Alu -31 281 1 1031 161 33 43 chr10 74941943 74942154 -65374611 - AluJo SINE Alu -103 209 1 870 124 0 0 chr10 74945807 74945928 -65370837 + AluSg/x SINE Alu 181 301 -9 903 133 54 42 chr10 74945932 74946098 -65370667 - L1MB8 LINE L1 -126 6052 5885 571 115 29 48 chr10 74946285 74946389 -65370376 + AluSq/x SINE Alu 2 103 -210 210 263 0 26 chr10 74946666 74946742 -65370023 + CT-rich Low_complexity Low_complexity 1 74 0 211 149 0 60 chr10 74946964 74947031 -65369734 + (TCCCC)n Simple_repeat Simple_repeat 4 66 0 260 241 36 54 chr10 74947034 74947146 -65369619 + C-rich Low_complexity Low_complexity 4 113 0 24 32 0 0 chr10 74947189 74947220 -65369545 + GC_rich Low_complexity Low_complexity 1 31 0 225 0 0 0 chr10 74947385 74947410 -65369355 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2344 78 7 0 chr10 74947575 74947868 -65368897 + AluSp SINE Alu 1 295 -18 1024 124 14 0 chr10 74947868 74948013 -65368752 + AluSg/x SINE Alu 132 278 -32 187 54 54 0 chr10 74948013 74948050 -65368715 + (TAA)n Simple_repeat Simple_repeat 1 39 0 840 197 0 0 chr10 74948107 74948244 -65368521 + AluJ SINE Alu 1 137 -175 982 173 43 0 chr10 74948316 74948478 -65368287 + AluJ SINE Alu 130 298 -14 1190 118 0 55 chr10 74948501 74948739 -65368026 + AluSq SINE Alu 12 236 -77 2296 90 3 3 chr10 74949609 74949910 -65366855 - AluY SINE Alu -10 301 1 2179 94 0 7 chr10 74950060 74950348 -65366417 - AluSc SINE Alu -17 292 7 1390 194 79 7 chr10 74950405 74950683 -65366082 - AluJb SINE Alu -14 298 1 310 228 139 13 chr10 74950780 74950938 -65365827 - AluSg/x SINE Alu -4 296 119 1081 135 17 6 chr10 74951249 74951427 -65365338 + AluSc SINE Alu 120 299 -10 1655 167 0 4 chr10 74951428 74951686 -65365079 - AluJb SINE Alu -55 257 1 1913 150 7 0 chr10 74951693 74952000 -65364765 - AluSx SINE Alu -3 309 1 1650 161 10 13 chr10 74952435 74952733 -65364032 - AluJb SINE Alu -15 297 1 2112 123 3 19 chr10 74952735 74953051 -65363714 - AluSx SINE Alu -1 311 1 649 242 0 0 chr10 74953060 74953188 -65363577 - FLAM_A SINE Alu -1 132 5 1870 125 0 25 chr10 74953945 74954225 -65362540 - AluSx SINE Alu -39 273 1 1201 131 0 11 chr10 74954356 74954531 -65362234 - AluSg/x SINE Alu -6 306 134 2364 95 0 10 chr10 74954531 74954699 -65362066 - AluSx SINE Alu -11 301 136 2242 105 0 0 chr10 74954699 74954995 -65361770 - AluSc SINE Alu -12 297 2 2364 95 0 10 chr10 74954995 74955130 -65361635 - AluSx SINE Alu -176 136 1 1884 150 0 29 chr10 74955640 74955946 -65360819 - AluSx SINE Alu -15 297 1 327 308 119 0 chr10 74955946 74956089 -65360676 + MIR SINE MIR 97 256 -6 2153 128 0 0 chr10 74956276 74956580 -65360185 - AluSg SINE Alu -6 304 1 191 360 13 0 chr10 74956591 74956666 -65360099 - MIR SINE MIR -13 249 174 1924 151 3 3 chr10 74956707 74957011 -65359754 - AluSx SINE Alu -8 304 1 1798 122 47 69 chr10 74957212 74957531 -65359234 - AluJb SINE Alu 0 312 1 2478 72 0 3 chr10 74957657 74957961 -65358804 - AluY SINE Alu -7 304 2 659 175 9 18 chr10 74958094 74958208 -65358557 - FLAM_A SINE Alu -17 116 4 2479 147 69 31 chr10 74958236 74958355 -65358410 - L1MB2 LINE L1 -1 6170 6057 2275 110 7 0 chr10 74958355 74958663 -65358102 - AluSx SINE Alu -2 310 1 2479 147 69 31 chr10 74958663 74959020 -65357745 - L1MB2 LINE L1 -114 6057 5676 1077 180 0 0 chr10 74959022 74959183 -65357582 - AluJb SINE Alu -20 292 132 754 174 15 15 chr10 74959195 74959327 -65357438 + FLAM_C SINE Alu 1 132 -1 271 103 103 52 chr10 74959327 74959363 -65357402 + AluY SINE Alu 133 174 -127 252 231 0 0 chr10 74959363 74959415 -65357350 + LTR30 LTR ERV1 1 52 -670 1245 92 111 74 chr10 74959415 74959632 -65357133 + LTR12 LTR ERV1 53 277 -437 337 263 10 0 chr10 74959632 74959731 -65357034 + LTR30 LTR ERV1 544 643 -79 763 110 0 0 chr10 74959733 74959833 -65356932 + LTR12 LTR ERV1 615 714 0 1035 90 0 0 chr10 74959833 74959966 -65356799 + AluY SINE Alu 165 297 -14 754 178 25 0 chr10 74959966 74960084 -65356681 - AluJo/FLAM SINE Alu -190 122 2 2117 151 56 35 chr10 74960088 74960273 -65356492 - L1MB2 LINE L1 -488 5683 5503 2284 92 3 25 chr10 74960273 74960590 -65356175 - AluSg SINE Alu 0 310 1 2117 151 56 35 chr10 74960590 74960785 -65355980 - L1MB2 LINE L1 -668 5503 5289 1867 123 0 97 chr10 74960785 74961125 -65355640 - AluSx SINE Alu -4 308 2 2117 151 56 35 chr10 74961125 74961248 -65355517 - L1MB2 LINE L1 -882 5289 5170 214 207 35 35 chr10 74961565 74961623 -65355142 + L2 LINE L2 3209 3266 -6 2356 99 10 0 chr10 74961678 74961982 -65354783 - AluSx SINE Alu -5 307 1 2353 88 0 3 chr10 74961994 74962288 -65354477 - AluY SINE Alu -18 293 1 1212 133 0 76 chr10 74963505 74963638 -65353127 - L1PA15 LINE L1 -4 6161 6048 2282 90 0 0 chr10 74963638 74963927 -65352838 - AluSq SINE Alu -24 289 1 1212 133 0 76 chr10 74963927 74964003 -65352762 - L1PA15 LINE L1 -117 6048 5968 1274 209 26 0 chr10 74964003 74964269 -65352496 - L1MD1 LINE L1 -1 6241 5967 2216 94 10 0 chr10 74964361 74964660 -65352105 + AluSp SINE Alu 1 302 -11 390 200 19 38 chr10 74964690 74964795 -65351970 + MIR SINE MIR 78 180 -82 290 312 192 66 chr10 74964936 74965285 -65351480 + L3 LINE CR1 36 428 -1149 2104 104 3 20 chr10 74965472 74965634 -65351131 - AluSg SINE Alu -17 293 137 2099 103 0 33 chr10 74965634 74965934 -65350831 - AluSc SINE Alu -19 290 1 2104 104 3 20 chr10 74965934 74966069 -65350696 - AluSg SINE Alu -173 137 1 1307 137 82 16 chr10 74966069 74966324 -65350441 - L1M4 LINE L1 -979 5167 4896 2675 148 15 44 chr10 74966324 74966471 -65350294 - MER44D DNA MER2_type -1882 605 455 2160 103 3 3 chr10 74966471 74966761 -65350004 - AluSx SINE Alu -22 290 1 2675 148 15 44 chr10 74966761 74966788 -65349977 - MER44D DNA MER2_type -2032 455 429 3893 157 16 67 chr10 74966788 74967516 -65349249 - LTR8 LTR ERV1 0 691 1 2675 148 15 44 chr10 74967516 74967813 -65348952 - MER44D DNA MER2_type -2058 429 275 2219 119 0 22 chr10 74967814 74967996 -65348769 - AluSx SINE Alu 0 312 138 2465 61 0 7 chr10 74967996 74968289 -65348476 - AluY SINE Alu -20 291 1 2219 119 0 22 chr10 74968289 74968425 -65348340 - AluSx SINE Alu -174 138 1 2339 93 0 7 chr10 74968427 74968737 -65348028 - AluSx SINE Alu -4 308 1 541 111 14 0 chr10 74969263 74969335 -65347430 + 7SLRNA srpRNA srpRNA 237 309 -11 2262 98 0 31 chr10 74969343 74969661 -65347104 + AluSx SINE Alu 5 312 0 1075 163 20 25 chr10 74969945 74970148 -65346617 + AluJo SINE Alu 86 287 -25 2195 126 0 0 chr10 74970194 74970487 -65346278 + AluSx SINE Alu 1 293 -19 1862 130 6 61 chr10 74971158 74971488 -65345277 - AluJb SINE Alu 0 312 1 189 0 0 0 chr10 74972072 74972093 -65344672 + (T)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr10 74974052 74974074 -65342691 + AT_rich Low_complexity Low_complexity 1 22 0 233 234 117 54 chr10 74974262 74974373 -65342392 - MIR SINE MIR -13 249 132 315 363 37 0 chr10 74974402 74974537 -65342228 + MIR SINE MIR 123 262 0 * 337 204 163 10 chr10 74974522 74974620 -65342145 - MIR SINE MIR -98 164 52 2261 97 7 13 chr10 74976041 74976350 -65340415 + AluSx SINE Alu 1 307 -5 189 121 0 0 chr10 74976710 74976743 -65340022 + (CAT)n Simple_repeat Simple_repeat 3 35 0 * 590 281 39 35 chr10 74976732 74976935 -65339830 - MIR SINE MIR 0 262 59 2376 71 0 7 chr10 74977076 74977373 -65339392 - AluY SINE Alu -16 295 1 196 355 8 16 chr10 74978281 74978402 -65338363 - L2 LINE L2 -338 2975 2856 184 222 0 22 chr10 74978400 74978445 -65338320 + L2 LINE L2 3270 3313 0 * 2150 78 35 0 chr10 74978542 74978825 -65337940 - AluSc SINE Alu -16 293 1 2158 144 103 10 chr10 74978903 74979292 -65337473 + MSTB LTR MaLR 1 425 -1 2180 90 3 0 chr10 74980166 74980455 -65336310 - AluSg SINE Alu -17 293 4 510 183 226 18 chr10 74980601 74980765 -65336000 - L1MD3 LINE L1 -29 7966 7769 997 172 17 78 chr10 74980796 74980980 -65335785 - AluJo SINE Alu -9 303 134 2113 113 0 0 chr10 74980980 74981272 -65335493 + AluSq SINE Alu 1 292 -21 997 172 17 78 chr10 74981272 74981319 -65335446 - AluJo SINE Alu -178 134 86 1778 188 21 44 chr10 74981322 74981752 -65335013 - L1MC4a LINE L1 -201 7607 7188 2009 82 13 59 chr10 74981870 74982176 -65334589 + AluSx SINE Alu 5 296 -16 613 242 73 12 chr10 74982951 74983116 -65333649 - MER69A DNA AcHobo -2 175 1 514 186 29 0 chr10 74983317 74983419 -65333346 - AluJ SINE Alu -206 106 2 294 198 27 72 chr10 74983424 74983488 -65333277 - L1ME LINE L1 -504 5662 5604 1927 153 6 57 chr10 74983488 74983688 -65333077 - MER7A DNA MER2_type -2692 346 173 2037 97 0 21 chr10 74983688 74984001 -65332764 + AluSq SINE Alu 2 308 0 1927 153 6 57 chr10 74984001 74984165 -65332600 - MER7A DNA MER2_type -2865 173 2 294 198 27 72 chr10 74984165 74984211 -65332554 - L1ME LINE L1 -562 5604 5557 1929 195 49 62 chr10 74984351 74984407 -65332358 - L1ME LINE L1 -743 5403 5348 1918 130 23 7 chr10 74984407 74984714 -65332051 - AluSx SINE Alu 0 312 1 1929 195 49 62 chr10 74984714 74984967 -65331798 - L1ME LINE L1 -798 5348 5093 2057 125 0 7 chr10 74984967 74985283 -65331482 - AluSx SINE Alu 0 312 1 1929 195 49 62 chr10 74985283 74985507 -65331258 - L1ME LINE L1 -1053 5093 5086 1595 111 56 82 chr10 74985507 74985813 -65330952 + AluSx SINE Alu 3 300 -12 1929 195 49 62 chr10 74985813 74986051 -65330714 - L1ME LINE L1 -1060 5086 4847 1825 124 37 0 chr10 74986052 74986369 -65330396 + AluSx SINE Alu 1 327 0 193 241 12 72 chr10 74986942 74987025 -65329740 - L2 LINE L2 -2 3311 3234 516 229 89 13 chr10 74987060 74987217 -65329548 + MIR SINE MIR 59 227 -35 261 198 0 0 chr10 74987665 74987746 -65329019 + G-rich Low_complexity Low_complexity 1 81 0 303 121 0 0 chr10 74987797 74987855 -65328910 + (G)n Simple_repeat Simple_repeat 1 58 0 723 219 4 63 chr10 74988047 74988317 -65328448 - AluSq SINE Alu -57 256 3 1641 210 35 31 chr10 74988333 74988546 -65328219 - L1M4 LINE L1 -846 5300 5089 1659 101 56 82 chr10 74988546 74988852 -65327913 + AluSx SINE Alu 3 300 -12 1641 210 35 31 chr10 74988852 74989090 -65327675 - L1M4 LINE L1 -1057 5089 4847 1825 124 37 0 chr10 74989091 74989408 -65327357 + AluSx SINE Alu 1 327 0 193 241 12 72 chr10 74989981 74990064 -65326701 - L2 LINE L2 -2 3311 3234 516 229 89 13 chr10 74990099 74990256 -65326509 + MIR SINE MIR 59 227 -35 246 62 0 0 chr10 74991274 74991306 -65325459 + (T)n Simple_repeat Simple_repeat 1 32 0 394 205 0 36 chr10 74992415 74992498 -65324267 + MIR SINE MIR 78 151 -57 2215 81 0 0 chr10 74992567 74992850 -65323915 - AluSg SINE Alu -27 283 1 863 125 28 0 chr10 74992912 74993056 -65323709 - AluJb SINE Alu -2 310 163 1567 127 0 0 chr10 74993061 74993282 -65323483 - AluSx SINE Alu -73 239 19 281 318 83 45 chr10 74993837 74993969 -65322796 + MIR SINE MIR 16 152 -56 2119 106 0 3 chr10 74994011 74994313 -65322452 - AluSx SINE Alu -11 301 1 1613 181 0 25 chr10 74994473 74994793 -65321972 - AluJo SINE Alu 0 312 1 184 57 29 29 chr10 74994998 74995033 -65321732 + (CATATA)n Simple_repeat Simple_repeat 1 35 0 2023 158 6 22 chr10 74995400 74995762 -65321003 - L1MC3 LINE L1 -167 7618 7263 2262 104 0 0 chr10 74996631 74996938 -65319827 - AluSx SINE Alu -5 307 1 943 182 31 0 chr10 74997086 74997245 -65319520 + FRAM SINE Alu 3 166 0 521 142 236 19 chr10 74997853 74997981 -65318784 - FLAM_C SINE Alu 0 155 5 1883 79 112 4 chr10 74998017 74998294 -65318471 - AluSq SINE Alu -6 307 1 1673 179 7 0 chr10 74999582 74999883 -65316882 + AluJo SINE Alu 1 303 -9 315 254 66 8 chr10 74999905 75000027 -65316738 + L1M3 LINE L1 4110 4238 -1908 2239 94 0 3 chr10 75000106 75000404 -65316361 - AluSq SINE Alu -15 298 2 336 275 107 15 chr10 75000409 75000540 -65316225 + L1M3 LINE L1 4326 4468 -1678 585 127 0 100 chr10 75000616 75000766 -65315999 + AluSq/x SINE Alu 2 136 -176 1974 163 57 12 chr10 75001200 75001221 -65315544 + L1M3 LINE L1 5262 5281 -890 1768 123 0 97 chr10 75001221 75001561 -65315204 + AluSx SINE Alu 2 308 -4 1974 163 57 12 chr10 75001561 75001756 -65315009 + L1M3 LINE L1 5281 5466 -705 2151 88 3 28 chr10 75001756 75002074 -65314691 + AluSg SINE Alu 1 310 0 1974 163 57 12 chr10 75002074 75002260 -65314505 + L1M3 LINE L1 5466 5683 -488 343 200 43 14 chr10 75002264 75002334 -65314431 + AluJ/FLAM SINE Alu 2 73 -229 217 289 11 11 chr10 75002480 75002570 -65314195 + CT-rich Low_complexity Low_complexity 5 94 0 21 95 0 0 chr10 75003495 75003558 -65313207 + GC_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr10 75003612 75003634 -65313131 + GC_rich Low_complexity Low_complexity 1 22 0 1175 140 4 49 chr10 75004037 75004280 -65312485 + AluSg/x SINE Alu 72 303 -9 347 235 235 52 chr10 75004307 75004613 -65312152 - L1ME4a LINE L1 -30 6091 5730 2172 94 7 3 chr10 75004613 75004910 -65311855 - AluSx SINE Alu -14 298 1 1659 162 7 7 chr10 75005017 75005307 -65311458 - AluJb SINE Alu -22 290 1 992 198 0 11 chr10 75005378 75005555 -65311210 - FAM SINE Alu 0 175 1 1796 139 3 23 chr10 75006543 75006846 -65309919 - AluJb SINE Alu -15 297 1 1994 119 3 7 chr10 75006881 75007183 -65309582 - AluSg SINE Alu -9 301 1 355 182 0 102 chr10 75007210 75007298 -65309467 - LTR16C LTR ERVL 0 491 413 396 239 210 40 chr10 75007512 75007688 -65309077 + MIR SINE MIR 57 262 0 1925 135 3 0 chr10 75007712 75008035 -65308730 - AluSx SINE Alu 0 324 1 1567 153 57 7 chr10 75008088 75008369 -65308396 + AluJb SINE Alu 7 301 -11 1510 168 16 42 chr10 75008507 75008816 -65307949 + AluJo SINE Alu 1 301 -11 1381 165 31 8 chr10 75008821 75009082 -65307683 + AluJo SINE Alu 36 302 -10 238 358 81 20 chr10 75009168 75009316 -65307449 + L2 LINE L2 3116 3272 0 243 255 20 0 chr10 75009332 75009383 -65307382 + L2 LINE L2 3209 3260 -12 339 25 0 0 chr10 75009571 75009611 -65307154 + (TA)n Simple_repeat Simple_repeat 2 41 0 2176 74 0 39 chr10 75009611 75009921 -65306844 - AluSx SINE Alu -14 298 1 22 0 0 0 chr10 75012103 75012125 -65304640 + AT_rich Low_complexity Low_complexity 1 22 0 2346 67 3 0 chr10 75012327 75012624 -65304141 + AluSc SINE Alu 1 298 -11 827 181 40 0 chr10 75012626 75012775 -65303990 + AluJb SINE Alu 136 290 -22 844 191 79 0 chr10 75012788 75012966 -65303799 - MER33 DNA MER1_type -132 192 1 317 255 57 28 chr10 75013055 75013161 -65303604 - MER102a DNA MER1_type -6 324 216 722 179 130 6 chr10 75013286 75013448 -65303317 - AluJb SINE Alu -5 307 126 344 250 71 12 chr10 75013781 75013865 -65302900 - L1MC4 LINE L1 -1339 6983 1976 1736 176 6 6 chr10 75013867 75014179 -65302586 - AluSx SINE Alu 0 312 1 192 309 12 36 chr10 75014237 75014321 -65302444 + L2 LINE L2 3228 3309 -4 417 329 27 27 chr10 75014513 75014662 -65302103 + LTR16C LTR ERVL 156 304 -187 1485 179 95 0 chr10 75014703 75014977 -65301788 + AluJb SINE Alu 1 300 -12 370 149 27 54 chr10 75014991 75015065 -65301700 - MER5A DNA MER1_type -107 82 11 756 160 89 19 chr10 75015073 75015286 -65301479 - AluSp SINE Alu -1 312 85 300 110 0 20 chr10 75016056 75016112 -65300653 + MER69 DNA AcHobo 2444 2498 -28 277 56 0 0 chr10 75016634 75016670 -65300095 - MIR SINE MIR -114 148 113 2134 126 0 0 chr10 75018072 75018381 -65298384 - AluSx SINE Alu -3 309 1 2610 57 27 0 chr10 75018594 75018929 -65297836 + LTR14A LTR ERVK 1 344 0 1144 137 9 50 chr10 75019343 75019509 -65297256 - L1MA4A LINE L1 -4 6299 6143 1756 149 0 58 chr10 75019509 75019837 -65296928 - AluSx SINE Alu -3 309 1 1144 137 9 50 chr10 75019837 75019889 -65296876 - L1MA4A LINE L1 -160 6143 6090 2249 83 0 35 chr10 75020380 75020692 -65296073 - AluY SINE Alu -10 301 1 2100 97 31 0 chr10 75020692 75020982 -65295783 - AluY SINE Alu -12 299 1 27 49 0 0 chr10 75021119 75021160 -65295605 + AT_rich Low_complexity Low_complexity 1 41 0 1826 129 0 0 chr10 75021772 75022036 -65294729 - AluSx SINE Alu -48 264 1 418 188 68 86 chr10 75022102 75022147 -65294618 + MER5B DNA MER1_type 1 45 -133 2036 101 45 0 chr10 75022147 75022434 -65294331 - AluSq SINE Alu -13 300 1 418 188 68 86 chr10 75022434 75022505 -65294260 + MER5B DNA MER1_type 45 115 -63 342 0 0 0 chr10 75022505 75022543 -65294222 + (TG)n Simple_repeat Simple_repeat 2 39 0 271 246 0 0 chr10 75022670 75022727 -65294038 + L2 LINE L2 3216 3272 0 401 167 9 46 chr10 75022741 75022849 -65293916 - AluSp/q SINE Alu -7 306 203 358 276 22 22 chr10 75023046 75023180 -65293585 + C-rich Low_complexity Low_complexity 5 138 0 * 459 267 5 43 chr10 75023086 75023273 -65293492 + CT-rich Low_complexity Low_complexity 1 180 0 289 349 0 30 chr10 75023204 75023370 -65293395 + C-rich Low_complexity Low_complexity 3 163 0 * 1833 110 0 75 chr10 75024569 75024887 -65291878 + AluSx SINE Alu 6 299 -13 2274 99 0 0 chr10 75025101 75025414 -65291351 + AluSq SINE Alu 1 313 0 1179 69 52 0 chr10 75025533 75025707 -65291058 + BC200 scRNA scRNA 1 183 -17 283 321 101 0 chr10 75025709 75025818 -65290947 - MIR3 SINE MIR -87 121 2 25 31 0 0 chr10 75026441 75026473 -65290292 + AT_rich Low_complexity Low_complexity 1 32 0 2023 115 6 10 chr10 75026997 75027311 -65289454 - AluSp SINE Alu 0 313 1 1763 145 24 24 chr10 75027473 75027769 -65288996 - AluJb SINE Alu -16 296 1 914 111 17 39 chr10 75028483 75028550 -65288215 + MER53 DNA DNA 1 68 -121 1789 167 13 17 chr10 75028550 75028850 -65287915 - AluJb SINE Alu -13 299 1 914 111 17 39 chr10 75028850 75028963 -65287802 + MER53 DNA DNA 68 177 -12 403 200 88 0 chr10 75028931 75029056 -65287709 + MER53 DNA DNA 43 178 -11 * 2431 89 3 6 chr10 75029095 75029409 -65287356 - AluSq SINE Alu 0 313 1 465 132 39 124 chr10 75029437 75029566 -65287199 + MER53 DNA DNA 71 188 -1 1879 154 0 3 chr10 75030436 75030722 -65286043 - AluSx SINE Alu -27 285 1 2007 133 4 0 chr10 75030727 75031052 -65285713 - AluSx SINE Alu 0 328 3 881 133 7 22 chr10 75031059 75031194 -65285571 - FLAM_C SINE Alu 0 133 1 1780 154 4 0 chr10 75031243 75031510 -65285255 - AluJb SINE Alu -44 268 1 2072 133 20 3 chr10 75032238 75032532 -65284233 - AluJb SINE Alu -13 299 1 2428 78 0 3 chr10 75034254 75034549 -65282216 - AluSq SINE Alu -11 302 9 2469 58 0 14 chr10 75034706 75035000 -65281765 - AluY SINE Alu -1 310 21 1797 184 0 3 chr10 75035265 75035571 -65281194 - AluJb SINE Alu 0 305 1 822 129 8 8 chr10 75035585 75035709 -65281056 - FLAM_A SINE Alu -7 135 12 2050 96 0 48 chr10 75035942 75036060 -65280705 + AluY SINE Alu 28 150 -161 2483 62 0 36 chr10 75036060 75036368 -65280397 + AluY SINE Alu 1 297 -14 2050 96 0 48 chr10 75036368 75036540 -65280225 + AluY SINE Alu 150 304 -7 857 291 4 13 chr10 75037070 75037307 -65279458 + AluJo SINE Alu 1 235 -77 452 204 20 0 chr10 75037523 75037621 -65279144 - LTR49-int LTR ERV1 -2884 3447 3348 1002 177 0 28 chr10 75037721 75037902 -65278863 + AluJb SINE Alu 120 295 -17 316 336 218 24 chr10 75038054 75038435 -65278330 - L2 LINE L2 -5 3308 2854 468 183 54 0 chr10 75038443 75038536 -65278229 + LTR47B LTR ERVL 5 102 -341 2323 102 7 0 chr10 75038544 75038847 -65277918 - AluSx SINE Alu -7 305 1 1301 154 28 28 chr10 75038848 75039095 -65277670 + LTR47A LTR ERVL 206 452 0 3119 148 20 56 chr10 75039095 75039705 -65277060 + L1MB2 LINE L1 5582 6169 -2 2148 128 10 3 chr10 75039710 75040016 -65276749 - AluSx SINE Alu -4 308 1 2343 98 3 13 chr10 75040028 75040343 -65276422 - AluSp SINE Alu -1 312 1 2171 125 7 0 chr10 75040343 75040646 -65276119 - AluSp SINE Alu -8 305 1 1587 228 45 30 chr10 75040659 75041150 -65275615 + L1MC4a LINE L1 7160 7657 -151 81 66 0 0 chr10 75041155 75041306 -65275459 + AT_rich Low_complexity Low_complexity 1 151 0 282 305 42 0 chr10 75041309 75041404 -65275361 + L1MD3 LINE L1 7840 7938 -57 240 35 0 0 chr10 75042031 75042060 -65274705 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2169 116 0 0 chr10 75042127 75042451 -65274314 + AluSq SINE Alu 1 324 0 975 272 196 0 chr10 75042505 75042928 -65273837 + LTR33 LTR ERVL 15 520 -1 2973 138 26 25 chr10 75047688 75048228 -65268537 + L1MA8 LINE L1 5644 6187 -104 944 214 17 25 chr10 75048228 75048466 -65268299 + MER46A DNA MER2_type 1 236 0 2973 138 26 25 chr10 75048466 75048497 -65268268 + L1MA8 LINE L1 6187 6216 -75 22 0 0 0 chr10 75048567 75048589 -65268176 + AT_rich Low_complexity Low_complexity 1 22 0 221 283 19 0 chr10 75048805 75048858 -65267907 + L2 LINE L2 3237 3290 -23 333 118 0 0 chr10 75048867 75048918 -65267847 + (TGGA)n Simple_repeat Simple_repeat 1 51 0 210 286 0 0 chr10 75048931 75048980 -65267785 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 192 242 0 30 chr10 75049114 75049213 -65267552 + GA-rich Low_complexity Low_complexity 1 96 0 27 49 0 0 chr10 75049505 75049546 -65267219 + AT_rich Low_complexity Low_complexity 1 41 0 329 292 129 17 chr10 75050061 75050239 -65266526 - MIR SINE MIR -30 232 35 1966 170 13 16 chr10 75050270 75050646 -65266119 - THE1C LTR MaLR 0 375 1 947 78 99 0 chr10 75050940 75051082 -65265683 + MSTA LTR MaLR 1 156 -272 24 0 0 0 chr10 75051536 75051560 -65265205 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr10 75051603 75051631 -65265134 + AT_rich Low_complexity Low_complexity 1 28 0 2273 107 0 16 chr10 75052979 75053289 -65263476 + AluSx SINE Alu 1 305 -7 37 39 0 0 chr10 75054626 75054677 -65262088 + AT_rich Low_complexity Low_complexity 1 51 0 2170 112 30 7 chr10 75054965 75055269 -65261496 - AluSx SINE Alu -1 311 1 209 225 0 28 chr10 75055458 75055529 -65261236 + T-rich Low_complexity Low_complexity 2 70 0 1129 158 0 0 chr10 75055603 75055767 -65260998 + AluSg/x SINE Alu 130 293 -17 725 157 16 70 chr10 75056015 75056200 -65260565 + AluY SINE Alu 2 176 -135 1428 181 19 15 chr10 75056602 75056872 -65259893 + AluY SINE Alu 40 310 -1 1861 112 6 96 chr10 75058783 75059105 -65257660 + AluSg SINE Alu 1 293 -17 347 233 0 68 chr10 75059903 75059982 -65256783 + Charlie1 DNA MER1_type 1 73 -2688 2347 113 3 0 chr10 75059982 75060293 -65256472 - AluSq SINE Alu -1 312 1 347 233 0 68 chr10 75060293 75060316 -65256449 + Charlie1 DNA MER1_type 73 96 -2665 2014 230 180 21 chr10 75060359 75060715 -65256050 + Charlie1 DNA MER1_type 86 384 -2377 1290 179 101 30 chr10 75060715 75060983 -65255782 + AluJo SINE Alu 1 287 -15 2014 230 180 21 chr10 75060983 75061462 -65255303 + Charlie1 DNA MER1_type 384 785 -1976 2168 129 3 0 chr10 75061462 75061757 -65255008 - AluSx SINE Alu -12 300 5 2014 230 180 21 chr10 75061757 75061771 -65254994 + Charlie1 DNA MER1_type 785 795 -1966 2214 117 0 0 chr10 75061771 75062070 -65254695 - AluY SINE Alu -12 299 1 2014 230 180 21 chr10 75062070 75062236 -65254529 + Charlie1 DNA MER1_type 795 2580 -181 677 250 6 0 chr10 75062252 75062408 -65254357 + MER20 DNA MER1_type 60 216 -3 715 258 0 0 chr10 75063030 75063189 -65253576 - FRAM SINE Alu -6 160 2 1248 81 0 0 chr10 75063218 75063367 -65253398 - AluSp SINE Alu -35 278 130 320 195 78 109 chr10 75063516 75063644 -65253121 - MIR3 SINE MIR -1 207 84 573 240 46 29 chr10 75063682 75063857 -65252908 - MER5B DNA MER1_type 0 178 1 2472 55 0 23 chr10 75065681 75065989 -65250776 + AluY SINE Alu 2 302 -9 235 291 236 8 chr10 75066027 75066154 -65250611 + MIR SINE MIR 50 205 -57 2024 130 49 0 chr10 75066351 75066635 -65250130 - AluSx SINE Alu -14 298 1 262 278 11 0 chr10 75066703 75066793 -65249972 + LTR30 LTR ERV1 553 643 -79 588 144 0 0 chr10 75066795 75066885 -65249880 + pTR5 LTR ERV1 303 392 -2046 * 1225 140 8 62 chr10 75066879 75067077 -65249688 + PABL_A-int LTR ERV1 750 934 -4081 2041 103 43 27 chr10 75067077 75067377 -65249388 - AluSq SINE Alu -8 305 1 1225 140 8 62 chr10 75067377 75067421 -65249344 + PABL_A-int LTR ERV1 934 979 -4036 2142 156 0 0 chr10 75067421 75067729 -65249036 - AluSx SINE Alu -2 310 3 214 174 333 0 chr10 75067859 75067928 -65248837 - MER5C DNA MER1_type -200 124 33 1766 162 50 23 chr10 75068141 75068444 -65248321 - AluSx SINE Alu -1 311 1 1047 244 64 39 chr10 75068574 75068729 -65248036 - AluJo SINE Alu -10 292 125 2067 156 0 0 chr10 75068729 75069030 -65247735 + AluSx SINE Alu 1 301 -11 1047 244 64 39 chr10 75069030 75069157 -65247608 - AluJo SINE Alu -177 125 3 2145 119 3 0 chr10 75069169 75069463 -65247302 - AluSp SINE Alu -18 295 1 1929 138 17 14 chr10 75070143 75070439 -65246326 + AluJb SINE Alu 3 299 -13 2034 125 36 0 chr10 75070501 75070781 -65245984 - AluSx SINE Alu -22 290 1 791 184 86 6 chr10 75070939 75071113 -65245652 - MER5A DNA MER1_type -1 188 1 821 181 121 70 chr10 75071127 75071326 -65245439 + AluJo SINE Alu 1 209 -103 2023 119 11 0 chr10 75071364 75071649 -65245116 + AluSc SINE Alu 1 288 -21 263 256 35 47 chr10 75071803 75071853 -65244912 + L2 LINE L2 3229 3279 -34 3515 158 26 70 chr10 75071853 75072576 -65244189 - LTR8 LTR ERV1 0 691 1 263 256 35 47 chr10 75072576 75072611 -65244154 + L2 LINE L2 3279 3313 0 235 186 0 23 chr10 75072797 75072840 -65243925 - MIR SINE MIR 0 262 221 235 186 0 23 chr10 75074753 75074796 -65241969 + MIR SINE MIR 221 262 0 307 133 133 67 chr10 75075017 75075137 -65241628 + LTR8 LTR ERV1 1 128 -563 225 210 12 37 chr10 75077719 75077800 -65238965 + G-rich Low_complexity Low_complexity 2 80 0 245 348 33 0 chr10 75078717 75078809 -65237956 - MIR SINE MIR -93 115 21 213 299 39 13 chr10 75078973 75079050 -65237715 + L2 LINE L2 3235 3313 0 2598 35 0 13 chr10 75079279 75079615 -65237150 - AluY SINE Alu 0 332 1 26 0 0 0 chr10 75079727 75079753 -65237012 + AT_rich Low_complexity Low_complexity 1 26 0 646 214 174 0 chr10 75079804 75079982 -65236783 - MER3 DNA MER1_type 0 209 1 558 298 147 9 chr10 75080797 75081015 -65235750 - MIR SINE MIR -13 249 2 198 176 29 0 chr10 75081842 75081876 -65234889 - L2 LINE L2 -94 3219 3185 1438 128 54 70 chr10 75082054 75082352 -65234413 - AluJb SINE Alu -19 293 1 1215 102 6 0 chr10 75083360 75083527 -65233238 + AluSg/x SINE Alu 134 301 -9 201 196 20 0 chr10 75083711 75083762 -65233003 + (TA)n Simple_repeat Simple_repeat 2 53 0 1232 145 5 10 chr10 75083971 75084171 -65232594 + AluJb SINE Alu 1 199 -113 180 0 0 0 chr10 75084189 75084209 -65232556 + (A)n Simple_repeat Simple_repeat 1 20 0 831 186 93 6 chr10 75084228 75084389 -65232376 + FAM SINE Alu 1 175 0 2185 101 3 0 chr10 75084396 75084694 -65232071 + AluSp SINE Alu 1 299 -14 1431 190 23 7 chr10 75085436 75085736 -65231029 + AluJo SINE Alu 1 305 -7 691 247 272 7 chr10 75085737 75086020 -65230745 - L2 LINE L2 0 3313 2956 364 225 146 7 chr10 75086031 75086182 -65230583 - MARNA DNA Mariner -39 547 376 1706 138 32 3 chr10 75086226 75086508 -65230257 + AluJo SINE Alu 1 290 -22 275 309 50 29 chr10 75087705 75087844 -65228921 + MIR SINE MIR 80 221 -41 443 266 40 111 chr10 75088752 75088881 -65227884 + Charlie8 DNA MER1_type 10 118 -2299 2099 114 0 0 chr10 75088881 75089178 -65227587 - AluSx SINE Alu -15 297 1 443 266 40 111 chr10 75089178 75089274 -65227491 + Charlie8 DNA MER1_type 118 219 -2198 2348 61 7 0 chr10 75089479 75089773 -65226992 - AluY SINE Alu -15 296 1 1671 191 118 9 chr10 75089775 75090225 -65226540 + Charlie4a DNA MER1_type 2 500 -8 31 76 0 0 chr10 75090927 75090993 -65225772 + GC_rich Low_complexity Low_complexity 1 66 0 212 206 15 44 chr10 75091691 75091759 -65225006 + GA-rich Low_complexity Low_complexity 2 67 0 1378 184 44 10 chr10 75091932 75092226 -65224539 + AluJb SINE Alu 1 304 -8 1574 120 76 47 chr10 75092342 75092643 -65224122 + AluJo SINE Alu 1 310 -2 2123 92 0 4 chr10 75092648 75092953 -65223812 + AluSg SINE Alu 1 304 0 211 197 211 13 chr10 75092955 75093031 -65223734 - L2 LINE L2 -1504 1810 1720 1808 191 2 88 chr10 75093043 75093534 -65223231 - L1MB8 LINE L1 -1 6177 5729 198 0 0 0 chr10 75093546 75093568 -65223197 + (TG)n Simple_repeat Simple_repeat 1 22 0 225 156 89 0 chr10 75093576 75093621 -65223144 - L2 LINE L2 -1636 1678 1630 1497 191 0 0 chr10 75093642 75093904 -65222861 + AluJb SINE Alu 35 296 -16 288 0 0 0 chr10 75098362 75098394 -65218371 + (T)n Simple_repeat Simple_repeat 1 32 0 2448 57 0 0 chr10 75098937 75099238 -65217527 + AluY SINE Alu 1 301 -10 2052 139 3 0 chr10 75102082 75102391 -65214374 + AluSx SINE Alu 1 310 -2 2038 107 24 0 chr10 75102797 75103086 -65213679 + AluSx SINE Alu 1 296 -16 631 317 62 21 chr10 75103136 75103376 -65213389 + MIR SINE MIR 12 261 -1 1261 162 20 81 chr10 75109094 75109391 -65207374 + AluJo SINE Alu 1 279 -33 180 0 0 0 chr10 75109391 75109411 -65207354 + (CA)n Simple_repeat Simple_repeat 1 20 0 23 33 0 0 chr10 75110920 75110950 -65205815 + AT_rich Low_complexity Low_complexity 1 30 0 758 176 8 0 chr10 75110950 75111075 -65205690 - FLAM_C SINE Alu -16 127 2 427 178 40 40 chr10 75111109 75111210 -65205555 + AluJ/FLAM SINE Alu 2 102 -210 253 191 22 45 chr10 75111277 75111366 -65205399 + CT-rich Low_complexity Low_complexity 1 87 0 621 206 0 0 chr10 75111842 75111949 -65204816 - THE1C LTR MaLR -268 107 1 229 100 0 0 chr10 75111995 75112049 -65204716 - AluSp/q SINE Alu 0 309 256 363 204 9 65 chr10 75112049 75112157 -65204608 - L1M4 LINE L1 -1763 4383 4282 1828 88 110 4 chr10 75112162 75112434 -65204331 - AluSg SINE Alu -9 301 1 1871 128 26 20 chr10 75112457 75112762 -65204003 - AluSx SINE Alu -2 310 4 206 211 0 0 chr10 75112812 75112850 -65203915 - MIR SINE MIR -9 253 216 180 360 37 59 chr10 75112860 75112996 -65203769 - MIR3 SINE MIR -51 157 25 222 296 56 0 chr10 75113844 75113915 -65202850 + L2 LINE L2 3155 3229 -43 260 346 79 14 chr10 75113986 75114200 -65202565 - L2 LINE L2 -1554 1760 1533 2272 86 3 0 chr10 75114306 75114607 -65202158 - AluY SINE Alu -9 302 1 207 343 28 19 chr10 75116600 75116708 -65200057 + L2 LINE L2 868 976 -2338 2178 91 0 19 chr10 75116722 75117030 -65199735 + AluSx SINE Alu 1 302 -10 196 360 99 29 chr10 75117136 75117519 -65199246 + L2 LINE L2 1042 1451 -1863 1142 179 4 61 chr10 75117632 75117894 -65198871 + AluJb SINE Alu 21 267 -45 1626 203 25 34 chr10 75117920 75118275 -65198490 + MER93b LTR ERV1 5 356 -17 446 288 15 8 chr10 75118275 75118407 -65198358 + L1MC1 LINE L1 6201 6333 0 262 328 17 8 chr10 75118669 75118788 -65197977 + 5S rRNA rRNA 2 121 0 381 22 0 0 chr10 75118824 75118870 -65197895 + (CA)n Simple_repeat Simple_repeat 2 47 0 341 21 0 21 chr10 75119497 75119544 -65197221 + (CA)n Simple_repeat Simple_repeat 2 47 0 682 175 0 118 chr10 75120711 75120922 -65195843 - L1M3 LINE L1 -727 5441 5256 2247 108 0 0 chr10 75120962 75121268 -65195497 - AluSp SINE Alu -7 306 1 2031 110 3 41 chr10 75121277 75121595 -65195170 - AluSx SINE Alu -6 306 1 180 111 0 0 chr10 75121956 75121983 -65194782 + (TA)n Simple_repeat Simple_repeat 1 27 0 1218 225 96 61 chr10 75122041 75122162 -65194603 + MLT1D LTR MaLR 1 116 -477 1449 214 73 3 chr10 75122162 75122503 -65194262 + MLT1A1 LTR MaLR 1 365 0 1218 225 96 61 chr10 75122503 75122878 -65193887 + MLT1D LTR MaLR 116 593 0 310 68 17 17 chr10 75122889 75122948 -65193817 + (CA)n Simple_repeat Simple_repeat 2 60 0 713 196 8 8 chr10 75123010 75123143 -65193622 + FLAM_A SINE Alu 1 133 0 2169 94 10 3 chr10 75124419 75124718 -65192047 + AluSc SINE Alu 1 301 -8 1388 210 0 10 chr10 75124833 75125124 -65191641 - AluJo SINE Alu -23 289 2 624 176 9 0 chr10 75127076 75127184 -65189581 - MER65A LTR ERV1 -165 280 172 4835 68 11 17 chr10 75127185 75127849 -65188916 - SVA Other Other 0 1386 727 1156 244 79 5 chr10 75129714 75130108 -65186657 + L1MC4 LINE L1 6821 7243 -799 245 234 0 31 chr10 75130206 75130223 -65186542 + AluYa5 SINE Alu 120 134 -167 1892 149 0 37 chr10 75130223 75130546 -65186219 + AluJo SINE Alu 1 311 -1 25 31 0 0 chr10 75131290 75131322 -65185443 + AT_rich Low_complexity Low_complexity 1 32 0 181 317 87 19 chr10 75133102 75133206 -65183559 - L2 LINE L2 -229 3043 2933 1947 150 14 3 chr10 75134207 75134501 -65182264 - AluSx SINE Alu -15 297 1 1054 196 40 0 chr10 75134806 75135005 -65181760 + MER58A DNA MER1_type 2 208 -16 462 251 72 18 chr10 75136023 75136190 -65180575 + L1MC4a LINE L1 5749 5924 -1884 1496 142 77 10 chr10 75136381 75136692 -65180073 + L1MA4 LINE L1 5968 6299 -1 2389 110 3 0 chr10 75137073 75137383 -65179382 - AluSp SINE Alu -2 311 1 311 264 82 38 chr10 75137658 75137817 -65178948 + MIR SINE MIR 96 261 -1 255 31 0 0 chr10 75138606 75138638 -65178127 + (TG)n Simple_repeat Simple_repeat 1 32 0 2480 67 0 3 chr10 75139235 75139535 -65177230 - AluSp SINE Alu -13 300 2 2109 130 6 16 chr10 75139862 75140177 -65176588 + AluSx SINE Alu 1 312 0 181 245 41 0 chr10 75142687 75142736 -65174029 + L2 LINE L2 3244 3294 -19 2319 99 0 0 chr10 75142859 75143152 -65173613 + AluSx SINE Alu 1 293 -19 489 327 181 22 chr10 75145264 75145817 -65170948 + L2 LINE L2 2627 3270 -2 1774 165 3 54 chr10 75147098 75147414 -65169351 + AluJo SINE Alu 1 300 -12 2204 110 0 16 chr10 75147968 75148277 -65168488 + AluJb SINE Alu 1 304 -8 2201 107 47 7 chr10 75148373 75148673 -65168092 + AluJo SINE Alu 1 312 0 187 182 0 0 chr10 75150944 75150977 -65165788 - MIR SINE MIR -113 149 117 2023 96 66 0 chr10 75151941 75152213 -65164552 + AluSx SINE Alu 1 290 -22 271 248 9 16 chr10 75156480 75156577 -65160188 - MER5B DNA MER1_type 0 189 1 2268 99 14 3 chr10 75156651 75156943 -65159822 + AluSx SINE Alu 1 295 -17 1155 77 7 0 chr10 75157195 75157338 -65159427 - AluSp/q SINE Alu -14 299 156 1669 141 0 4 chr10 75157374 75157616 -65159149 + AluSg/x SINE Alu 72 312 0 792 189 70 53 chr10 75157787 75158015 -65158750 - MIR SINE MIR -18 244 13 1217 86 0 7 chr10 75158612 75158764 -65158001 - AluSc SINE Alu -158 151 1 2289 108 0 0 chr10 75159342 75159638 -65157127 - AluSq SINE Alu -15 298 3 2174 113 3 17 chr10 75159649 75159949 -65156816 - AluSx SINE Alu -16 296 1 2288 93 0 3 chr10 75159979 75160288 -65156477 + AluSx SINE Alu 1 312 0 1430 175 4 19 chr10 75164487 75164744 -65152021 - AluJo SINE Alu -18 294 42 2297 116 3 0 chr10 75164925 75165236 -65151529 + AluSx SINE Alu 1 312 0 792 189 70 53 chr10 75165407 75165635 -65151130 - MIR SINE MIR -18 244 13 27 108 0 0 chr10 75165782 75165893 -65150872 + GC_rich Low_complexity Low_complexity 1 111 0 536 243 123 78 chr10 75166883 75167167 -65149598 + MER102b DNA MER1_type 44 340 -1 1158 109 8 96 chr10 75168241 75168480 -65148285 + L1MC1 LINE L1 6116 6333 0 326 233 288 34 chr10 75168735 75168881 -65147884 - MER5A DNA MER1_type 0 189 7 332 231 46 37 chr10 75168898 75169006 -65147759 + MIR SINE MIR 27 135 -127 658 248 66 35 chr10 75170025 75170251 -65146514 + MIR SINE MIR 28 260 -2 676 180 8 0 chr10 75170281 75170409 -65146356 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 75170784 75170839 -65145926 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 459 287 60 12 chr10 75172234 75172401 -65144364 + MIR SINE MIR 13 187 -75 387 259 71 18 chr10 75172395 75172507 -65144258 + L2 LINE L2 3194 3311 -2 * 244 200 53 40 chr10 75172498 75172573 -65144192 + MIR SINE MIR 187 262 0 * 2070 118 4 7 chr10 75174306 75174585 -65142180 + AluSx SINE Alu 3 280 -32 1012 170 13 74 chr10 75175734 75175963 -65140802 - MER20 DNA MER1_type -4 215 1 2059 146 7 3 chr10 75176056 75176358 -65140407 + AluJb SINE Alu 1 303 -9 278 310 52 26 chr10 75176793 75176909 -65139856 + MIR3 SINE MIR 86 204 -4 211 317 0 50 chr10 75178699 75178800 -65137965 + MIR3 SINE MIR 107 202 -6 337 311 76 62 chr10 75179744 75179969 -65136796 - L2 LINE L2 -20 3252 3025 313 319 110 87 chr10 75180164 75180269 -65136496 - L2 LINE L2 -529 2785 2684 1071 179 12 0 chr10 75180269 75180442 -65136323 + FAM SINE Alu 1 175 0 313 319 110 87 chr10 75180442 75180750 -65136015 - L2 LINE L2 -630 2684 2353 2576 57 17 0 chr10 75180750 75181050 -65135715 - AluY SINE Alu -6 305 1 313 319 110 87 chr10 75181050 75181197 -65135568 - L2 LINE L2 -961 2353 2211 1855 138 3 3 chr10 75181656 75181939 -65134826 + AluSx SINE Alu 14 296 -16 1647 169 30 24 chr10 75181960 75182255 -65134510 + AluJb SINE Alu 1 297 -15 1808 134 35 10 chr10 75182985 75183275 -65133490 + AluSx SINE Alu 1 297 -15 197 281 240 10 chr10 75183393 75183489 -65133276 + L2 LINE L2 3194 3311 -2 302 258 133 33 chr10 75187262 75187382 -65129383 + MIR SINE MIR 21 152 -110 566 251 36 24 chr10 75187416 75187583 -65129182 + MER5B DNA MER1_type 5 173 -5 911 239 33 5 chr10 75187818 75188031 -65128734 - MIR SINE MIR -11 251 33 2137 120 3 0 chr10 75190218 75190527 -65126238 + AluSx SINE Alu 1 310 -2 1541 163 30 20 chr10 75190760 75191055 -65125710 + AluJo SINE Alu 1 298 -14 264 320 30 54 chr10 75191218 75191421 -65125344 - L2 LINE L2 -216 3056 2859 2614 45 0 0 chr10 75192135 75192443 -65124322 + AluY SINE Alu 1 308 -3 2085 122 0 10 chr10 75192454 75192758 -65124007 + AluSx SINE Alu 1 301 -11 274 284 67 22 chr10 75192762 75192896 -65123869 + L1P5 LINE L1 5323 5462 -694 328 283 44 71 chr10 75192896 75193090 -65123675 + L1ME4a LINE L1 5536 5725 -396 1785 174 13 7 chr10 75193090 75193400 -65123365 + AluJo SINE Alu 1 312 0 328 283 44 71 chr10 75193400 75193431 -65123334 + L1ME4a LINE L1 5725 5755 -366 712 161 8 24 chr10 75193434 75193558 -65123207 + FLAM_A SINE Alu 1 122 -11 27 29 0 0 chr10 75193560 75193594 -65123171 + AT_rich Low_complexity Low_complexity 1 34 0 240 268 74 107 chr10 75193601 75193748 -65123017 + L1ME4a LINE L1 5762 5912 -209 2204 95 7 0 chr10 75193748 75194043 -65122722 + AluSc SINE Alu 1 297 -12 240 268 74 107 chr10 75194043 75194261 -65122504 + L1ME4a LINE L1 5912 6115 -6 22 35 0 0 chr10 75194261 75194290 -65122475 + AT_rich Low_complexity Low_complexity 1 29 0 730 152 38 38 chr10 75194303 75194435 -65122330 + FLAM_A SINE Alu 2 133 0 1928 128 35 0 chr10 75194475 75194765 -65122000 - AluSx SINE Alu -12 300 1 2305 95 7 0 chr10 75194789 75195095 -65121670 - AluSg SINE Alu -2 308 1 21 0 0 0 chr10 75195844 75195865 -65120900 + AT_rich Low_complexity Low_complexity 1 21 0 1031 163 12 0 chr10 75195914 75196080 -65120685 + AluJb SINE Alu 134 301 -11 306 0 0 0 chr10 75196618 75196652 -65120113 + (CA)n Simple_repeat Simple_repeat 2 35 0 2004 82 3 21 chr10 75196753 75197035 -65119730 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 75197039 75197086 -65119679 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 895 272 179 8 chr10 75197307 75197693 -65119072 - Tigger8 DNA MER2_type -53 613 162 205 271 0 0 chr10 75198166 75198214 -65118551 + CT-rich Low_complexity Low_complexity 2 49 0 2308 56 24 0 chr10 75198874 75199162 -65117603 + AluY SINE Alu 1 295 -16 2319 91 0 7 chr10 75199889 75200198 -65116567 - AluSx SINE Alu -1 311 5 268 171 61 61 chr10 75202527 75202609 -65114156 + MIR SINE MIR 111 192 -70 939 287 106 53 chr10 75202706 75202837 -65113928 - L2 LINE L2 -21 3292 3169 1839 154 3 3 chr10 75202837 75203143 -65113622 + AluSx SINE Alu 1 306 -6 939 287 106 53 chr10 75203143 75203191 -65113574 - L2 LINE L2 -144 3169 3125 2213 113 0 0 chr10 75203191 75203493 -65113272 + AluSx SINE Alu 1 302 -10 939 287 106 53 chr10 75203493 75203887 -65112878 - L2 LINE L2 -188 3125 2753 2201 99 0 0 chr10 75203887 75204180 -65112585 + AluSq SINE Alu 3 295 -18 939 287 106 53 chr10 75204180 75204483 -65112282 - L2 LINE L2 -560 2753 2361 801 153 7 15 chr10 75205093 75205230 -65111535 + AluJo SINE Alu 2 137 -175 2275 92 0 10 chr10 75205243 75205378 -65111387 + AluSx SINE Alu 1 136 -176 2342 87 0 6 chr10 75205378 75205689 -65111076 + AluSq SINE Alu 1 309 -4 2275 92 0 10 chr10 75205689 75205859 -65110906 + AluSx SINE Alu 136 303 -9 282 29 0 0 chr10 75205859 75205894 -65110871 + (TA)n Simple_repeat Simple_repeat 2 36 0 237 222 0 0 chr10 75205894 75205939 -65110826 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 75206665 75206698 -65110067 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 419 276 116 25 chr10 75207222 75207421 -65109344 + MIR SINE MIR 8 224 -38 2363 64 3 0 chr10 75209595 75209890 -65106875 + AluY SINE Alu 2 297 -14 185 182 152 0 chr10 75210744 75210810 -65105955 + MIR SINE MIR 79 154 -108 565 338 48 13 chr10 75211473 75211701 -65105064 + MIR SINE MIR 3 238 -24 2334 60 0 10 chr10 75213972 75214270 -65102495 + AluSg SINE Alu 16 310 0 1558 96 0 9 chr10 75214871 75215090 -65101675 + AluSq SINE Alu 78 294 -19 2008 124 7 3 chr10 75215096 75215386 -65101379 + AluSg SINE Alu 1 291 -19 1846 160 0 25 chr10 75215465 75215784 -65100981 - AluJb SINE Alu -1 311 1 2313 81 7 0 chr10 75216056 75216363 -65100402 - AluY SINE Alu -2 309 1 802 127 0 89 chr10 75216376 75216533 -65100232 - FLAM_C SINE Alu 0 143 1 201 154 0 0 chr10 75217612 75217651 -65099114 + (CCCTG)n Simple_repeat Simple_repeat 3 41 0 520 227 64 43 chr10 75217783 75217924 -65098841 + MIR SINE MIR 119 262 0 2051 125 13 10 chr10 75218144 75218455 -65098310 - AluSx SINE Alu 0 312 1 200 216 39 0 chr10 75219251 75219302 -65097463 + CT-rich Low_complexity Low_complexity 1 53 0 1553 179 0 40 chr10 75220241 75220317 -65096448 + AluJb SINE Alu 1 79 -245 2291 90 3 3 chr10 75220317 75220629 -65096136 - AluSq SINE Alu 0 313 2 1553 179 0 40 chr10 75220629 75220888 -65095877 + AluJb SINE Alu 79 324 0 2020 74 27 27 chr10 75220916 75221214 -65095551 - AluSg SINE Alu 0 310 13 495 255 153 25 chr10 75222484 75222680 -65094085 - MIR SINE MIR -41 221 1 360 0 0 0 chr10 75226801 75226841 -65089924 + (TG)n Simple_repeat Simple_repeat 1 40 0 2443 62 0 0 chr10 75226896 75227200 -65089565 + AluY SINE Alu 1 304 -7 2110 99 3 20 chr10 75228903 75229205 -65087560 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 75230133 75230154 -65086611 + GC_rich Low_complexity Low_complexity 1 21 0 1894 202 50 22 chr10 75231770 75231989 -65084776 - MSTB LTR MaLR -12 414 202 1308 135 0 10 chr10 75231989 75232189 -65084576 - AluSg/x SINE Alu -11 299 102 2095 129 0 10 chr10 75231991 75232293 -65084472 - AluSx SINE Alu -13 299 1 1894 202 50 22 chr10 75232293 75232472 -65084293 - MSTB LTR MaLR -328 98 3 2186 125 0 10 chr10 75232764 75233075 -65083690 + AluY SINE Alu 1 308 -3 34 24 0 0 chr10 75233484 75233525 -65083240 + AT_rich Low_complexity Low_complexity 1 41 0 2266 110 3 0 chr10 75233917 75234216 -65082549 + AluSx SINE Alu 1 300 -12 391 241 113 85 chr10 75234282 75234494 -65082271 - HAL1 LINE L1 -218 2289 2072 246 266 173 81 chr10 75234762 75235083 -65081682 - HAL1 LINE L1 -585 1922 1632 7171 65 12 20 chr10 75235083 75236750 -65080015 - SVA Other Other -683 1386 6 246 266 173 81 chr10 75236750 75237268 -65079497 - HAL1 LINE L1 -875 1632 1003 248 264 58 50 chr10 75237358 75237479 -65079286 - HAL1 LINE L1 -1765 742 621 344 313 135 49 chr10 75237662 75237988 -65078777 - HAL1 LINE L1 -2150 357 4 1243 158 5 23 chr10 75238236 75238451 -65078314 + AluJo SINE Alu 87 297 -15 3564 212 23 4 chr10 75238563 75238574 -65078191 - L1 LINE L1 -852 5294 5285 2986 102 9 25 chr10 75238574 75239023 -65077742 - L1PB1 LINE L1 -1 6150 5709 3564 212 23 4 chr10 75239023 75239831 -65076934 - L1 LINE L1 -861 5285 4459 3328 195 19 16 chr10 75239832 75239858 -65076907 + L1 LINE L1 3762 3786 -2360 2313 84 0 7 chr10 75239858 75240155 -65076610 + AluSg SINE Alu 1 295 -15 3328 195 19 16 chr10 75240155 75240776 -65075989 + L1 LINE L1 3786 4414 -1732 201 39 0 0 chr10 75240776 75240802 -65075963 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3328 195 19 16 chr10 75240802 75240851 -65075914 + L1 LINE L1 4414 4461 -1685 2583 49 3 0 chr10 75241948 75242252 -65074513 + AluY SINE Alu 1 305 -6 1835 138 13 41 chr10 75243243 75243419 -65073346 - AluSx SINE Alu -3 309 130 2025 109 17 17 chr10 75243419 75243721 -65073044 - AluSg1 SINE Alu -7 302 1 2361 106 3 0 chr10 75243725 75244028 -65072737 - AluSp SINE Alu -9 304 1 1835 138 13 41 chr10 75244028 75244164 -65072601 - AluSx SINE Alu -185 127 1 2141 108 10 0 chr10 75244173 75244504 -65072261 - AluSx SINE Alu 0 312 1 2265 97 3 3 chr10 75244516 75244805 -65071960 - AluSq SINE Alu -24 289 1 2289 109 3 3 chr10 75244808 75245112 -65071653 - AluSq SINE Alu -9 304 1 2490 94 0 0 chr10 75245603 75245911 -65070854 - AluSg SINE Alu -2 308 1 1831 122 48 4 chr10 75247348 75247647 -65069118 + AluSx SINE Alu 1 311 0 203 236 11 56 chr10 75247694 75247783 -65068982 + T-rich Low_complexity Low_complexity 1 85 0 1873 158 0 13 chr10 75248190 75248493 -65068272 - AluJo SINE Alu -13 299 1 936 205 6 6 chr10 75248747 75248913 -65067852 + FRAM SINE Alu 1 166 0 255 256 18 98 chr10 75248927 75249091 -65067674 - L1ME3A LINE L1 -51 6119 5969 2118 129 0 7 chr10 75249118 75249421 -65067344 - AluSx SINE Alu -11 301 1 1502 165 24 17 chr10 75249457 75249748 -65067017 + AluJo SINE Alu 1 293 -19 361 206 72 31 chr10 75249817 75249914 -65066851 - L1MC5 LINE L1 -451 7510 7410 612 116 9 45 chr10 75249918 75249935 -65066830 - MER2 DNA MER2_type -150 195 179 1388 106 111 24 chr10 75249935 75250143 -65066622 - MER30 DNA MER1_type -4 226 1 612 116 9 45 chr10 75250143 75250202 -65066563 - MER2 DNA MER2_type -166 179 122 2326 105 0 0 chr10 75250202 75250496 -65066269 + AluSx SINE Alu 1 294 -18 612 116 9 45 chr10 75250496 75250530 -65066235 - MER2 DNA MER2_type -223 122 88 182 273 18 0 chr10 75250532 75250587 -65066178 + L2 LINE L2 2497 2552 -762 543 128 0 75 chr10 75250587 75250681 -65066084 + MER2 DNA MER2_type 1 87 -258 1654 244 58 28 chr10 75250685 75250921 -65065844 - L2 LINE L2 -997 2317 2090 1991 151 3 0 chr10 75250921 75251225 -65065540 + AluSx SINE Alu 1 305 -7 1654 244 58 28 chr10 75251225 75251455 -65065310 - L2 LINE L2 -1224 2090 1837 2423 67 0 7 chr10 75251465 75251762 -65065003 + AluY SINE Alu 1 295 -16 1729 178 16 10 chr10 75252009 75252318 -65064447 + AluJb SINE Alu 1 311 -1 330 285 220 0 chr10 75252332 75252518 -65064247 + L1MC/D LINE L1 5569 5795 -2013 378 0 0 0 chr10 75254939 75254981 -65061784 + (TG)n Simple_repeat Simple_repeat 1 42 0 8234 67 28 3 chr10 75255672 75256833 -65059932 - L1P LINE L1 -3640 2506 1317 2122 197 90 4 chr10 75257147 75257625 -65059140 + Charlie1b DNA MER1_type 1 519 -4 1775 144 26 47 chr10 75259569 75259909 -65056856 + THE1B LTR MaLR 32 364 0 6409 30 8 0 chr10 75260634 75261630 -65055135 - L1P2 LINE L1 -515 5639 4639 619 283 86 5 chr10 75261802 75262000 -65054765 - Charlie8 DNA MER1_type -2203 214 1 1625 188 0 41 chr10 75262001 75262321 -65054444 - AluJb SINE Alu -5 307 1 550 325 67 12 chr10 75263825 75264065 -65052700 + MIR SINE MIR 8 260 -2 378 140 11 21 chr10 75264521 75264614 -65052151 + (TA)n Simple_repeat Simple_repeat 2 93 0 246 132 29 15 chr10 75266729 75266797 -65049968 + (TA)n Simple_repeat Simple_repeat 1 69 0 319 350 55 31 chr10 75266972 75267226 -65049539 - L3 LINE CR1 -99 1478 1219 4197 168 17 9 chr10 75267580 75268619 -65048146 + L1MA6 LINE L1 4961 6010 -290 297 0 0 0 chr10 75269502 75269535 -65047230 + (CA)n Simple_repeat Simple_repeat 2 34 0 1188 268 53 46 chr10 75269537 75270190 -65046575 - L2 LINE L2 -168 3145 2495 1811 134 10 26 chr10 75270325 75270638 -65046127 + AluSx SINE Alu 1 308 -4 601 227 23 15 chr10 75271093 75271225 -65045540 + AluJo/FLAM SINE Alu 1 133 -169 1382 76 6 0 chr10 75271227 75271398 -65045367 + AluSp SINE Alu 1 172 -141 534 164 35 26 chr10 75271498 75271614 -65045151 + MLT1A1 LTR MaLR 249 365 0 1083 270 31 83 chr10 75271757 75272239 -65044526 + LTR16A1 LTR ERVL 1 457 0 186 43 0 0 chr10 75272820 75272843 -65043922 + (GA)n Simple_repeat Simple_repeat 2 24 0 368 354 79 0 chr10 75273337 75273501 -65043264 + MIR SINE MIR 29 205 -57 577 276 83 66 chr10 75274248 75274293 -65042472 - MLT1I LTR MaLR -3 406 363 1303 186 28 24 chr10 75274293 75274583 -65042182 - AluJo SINE Alu -19 293 3 577 276 83 66 chr10 75274583 75274900 -65041865 - MLT1I LTR MaLR -46 363 38 212 226 16 0 chr10 75276833 75276895 -65039870 + (TA)n Simple_repeat Simple_repeat 2 64 0 180 152 0 0 chr10 75276980 75277013 -65039752 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1455 153 0 0 chr10 75277119 75277341 -65039424 - AluJb SINE Alu -8 304 83 1977 152 3 3 chr10 75277344 75277640 -65039125 - AluJo SINE Alu -16 296 1 1253 100 50 20 chr10 75278786 75278986 -65037779 - AluSg1 SINE Alu -103 206 1 324 244 38 76 chr10 75278986 75279070 -65037695 - L1ME4a LINE L1 -178 5943 5864 1882 167 0 23 chr10 75279070 75279376 -65037389 - AluJo SINE Alu -13 299 1 324 244 38 76 chr10 75279376 75279422 -65037343 - L1ME4a LINE L1 -257 5864 5818 934 104 56 28 chr10 75280355 75280499 -65036266 - AluSq/x SINE Alu -165 148 1 462 60 0 72 chr10 75281231 75281314 -65035451 - L1PA16 LINE L1 -11 6155 6079 489 297 7 0 chr10 75282674 75282812 -65033953 - MIR SINE MIR -77 185 47 240 333 17 17 chr10 75283212 75283329 -65033436 - L2 LINE L2 -36 3277 3161 275 49 24 0 chr10 75284876 75284917 -65031848 + (TG)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr10 75285382 75285419 -65031346 + AT_rich Low_complexity Low_complexity 1 37 0 663 174 58 0 chr10 75285530 75285685 -65031080 + L1MA8 LINE L1 6128 6291 0 283 284 142 15 chr10 75285694 75285828 -65030937 + MIR SINE MIR 99 249 -13 2597 132 19 56 chr10 75286071 75286238 -65030527 - L1MB4 LINE L1 -188 5992 5820 2393 114 0 0 chr10 75286238 75286545 -65030220 - AluSx SINE Alu -5 307 1 2597 132 19 56 chr10 75286545 75286914 -65029851 - L1MB4 LINE L1 -360 5820 5476 4158 50 4 0 chr10 75288688 75289193 -65027572 - L1PA5 LINE L1 0 6154 5648 370 253 22 56 chr10 75289692 75289870 -65026895 + GA-rich Low_complexity Low_complexity 5 176 0 1671 166 36 4 chr10 75289897 75290175 -65026590 + AluJb SINE Alu 9 295 -17 27 0 0 0 chr10 75290200 75290227 -65026538 + AT_rich Low_complexity Low_complexity 1 27 0 2085 125 0 11 chr10 75290237 75290555 -65026210 + AluSx SINE Alu 1 315 0 320 211 103 83 chr10 75293883 75294039 -65022726 - L1MC4 LINE L1 -124 7918 7760 449 320 63 31 chr10 75294435 75294657 -65022108 + MIR SINE MIR 34 262 0 344 299 178 0 chr10 75294793 75294950 -65021815 + MIR SINE MIR 28 212 -50 753 171 17 0 chr10 75295066 75295183 -65021582 + FLAM_A SINE Alu 1 119 -14 932 228 97 15 chr10 75295489 75295871 -65020894 + L1MC4 LINE L1 7580 8042 0 806 238 100 109 chr10 75295984 75296311 -65020454 - MLT1H1 LTR MaLR -2 553 230 2102 106 3 14 chr10 75296311 75296604 -65020161 - AluSg SINE Alu -19 291 2 806 238 100 109 chr10 75296604 75296726 -65020039 - MLT1H1 LTR MaLR -325 230 108 503 121 0 121 chr10 75298183 75298234 -65018531 - L1M3 LINE L1 -627 5544 5513 1005 149 0 83 chr10 75298234 75298377 -65018388 - AluJo/FRAM SINE Alu 0 302 175 2139 131 0 3 chr10 75298377 75298674 -65018091 + AluSx SINE Alu 1 296 -16 1005 149 0 83 chr10 75298674 75298711 -65018054 - AluJo/FRAM SINE Alu -127 175 137 503 121 0 121 chr10 75298711 75298775 -65017990 - L1M3 LINE L1 -658 5513 5443 239 367 11 0 chr10 75300788 75300878 -65015887 - L3 LINE CR1 -1170 407 317 630 223 7 29 chr10 75301045 75301184 -65015581 - MIR SINE MIR -80 182 47 196 328 15 30 chr10 75302093 75302160 -65014605 + MIR SINE MIR 8 73 -189 446 118 0 37 chr10 75302220 75302449 -65014316 + AluSx SINE Alu 1 266 -43 546 179 9 36 chr10 75302471 75302583 -65014182 - L2 LINE L2 -17 3296 3188 403 136 0 0 chr10 75302832 75302898 -65013867 + Alu SINE Alu 236 301 -8 182 363 24 24 chr10 75302901 75303025 -65013740 - MER5A DNA MER1_type -64 125 2 1019 118 0 26 chr10 75303106 75303258 -65013507 + AluSg/x SINE Alu 157 304 -8 1732 199 16 0 chr10 75303613 75303920 -65012845 + AluSx SINE Alu 1 312 0 1132 188 5 0 chr10 75303970 75304162 -65012603 - AluJo SINE Alu 0 312 120 360 245 5 24 chr10 75304176 75304387 -65012378 + C-rich Low_complexity Low_complexity 1 206 0 243 79 0 0 chr10 75304464 75304502 -65012263 + (CG)n Simple_repeat Simple_repeat 1 38 0 564 136 167 38 chr10 75304732 75304864 -65011901 + MER20 DNA MER1_type 1 149 -70 1956 143 16 32 chr10 75304972 75305286 -65011479 - AluJo SINE Alu -1 311 3 2182 108 0 24 chr10 75307644 75307959 -65008806 - AluSx SINE Alu 0 312 1 446 308 119 39 chr10 75307963 75307989 -65008776 - L1M4 LINE L1 -1704 4442 4420 1875 170 3 16 chr10 75307989 75308295 -65008470 + AluJo SINE Alu 1 302 -10 446 308 119 39 chr10 75308295 75308654 -65008111 - L1M4 LINE L1 -1726 4420 4026 291 150 17 33 chr10 75308755 75308815 -65007950 + AluS SINE Alu 3 61 -239 520 250 9 0 chr10 75308929 75309041 -65007724 - FLAM_C SINE Alu -29 114 2 21 0 0 0 chr10 75309108 75309129 -65007636 + AT_rich Low_complexity Low_complexity 1 21 0 2261 105 10 0 chr10 75309136 75309440 -65007325 - AluSp SINE Alu -6 307 1 2220 115 0 10 chr10 75309440 75309745 -65007020 - AluSx SINE Alu -10 302 1 2019 109 71 3 chr10 75310693 75310976 -65005789 + AluSx SINE Alu 1 302 -10 1780 122 37 44 chr10 75311384 75311678 -65005087 + AluSx SINE Alu 1 292 -20 1858 99 12 0 chr10 75311833 75312075 -65004690 - AluSq SINE Alu -68 245 1 351 60 0 0 chr10 75312281 75312331 -65004434 + (CA)n Simple_repeat Simple_repeat 2 51 0 329 254 74 8 chr10 75312668 75312790 -65003975 - L1ME4a LINE L1 -56 6065 5936 228 220 34 0 chr10 75312812 75312871 -65003894 - L1ME1 LINE L1 -3 6163 6103 273 173 0 19 chr10 75312907 75312959 -65003806 + AluSp SINE Alu 152 202 -101 938 244 108 61 chr10 75312960 75313018 -65003747 - MLT2B1 LTR ERVL -5 515 461 273 57 0 0 chr10 75313018 75313053 -65003712 + (TG)n Simple_repeat Simple_repeat 2 36 0 938 244 108 61 chr10 75313053 75313486 -65003279 - MLT2B1 LTR ERVL -59 461 1 232 235 25 25 chr10 75313487 75313568 -65003197 + MLT1K LTR MaLR 505 585 -3 2256 80 10 0 chr10 75313729 75314017 -65002748 - AluSp SINE Alu -21 292 2 949 10 0 0 chr10 75314045 75314147 -65002618 + AluY SINE Alu 195 296 -15 767 202 0 0 chr10 75314147 75314271 -65002494 - AluJo/FLAM SINE Alu -187 125 2 632 205 49 0 chr10 75314276 75314398 -65002367 - AluJb SINE Alu -8 304 177 736 152 38 38 chr10 75314608 75314740 -65002025 - FLAM_A SINE Alu 0 133 2 22 35 0 0 chr10 75314753 75314782 -65001983 + AT_rich Low_complexity Low_complexity 1 29 0 301 256 79 74 chr10 75314782 75314997 -65001768 - L1ME4a LINE L1 -6 6115 5900 1747 110 23 19 chr10 75315000 75315264 -65001501 - AluSx SINE Alu -13 299 35 243 121 12 205 chr10 75315264 75315309 -65001456 + L2 LINE L2 3202 3226 -87 2066 127 14 7 chr10 75315309 75315600 -65001165 - AluSx SINE Alu -19 293 1 243 121 12 205 chr10 75315600 75315637 -65001128 + L2 LINE L2 3226 3268 -45 2333 107 3 0 chr10 75315646 75315945 -65000820 - AluSp SINE Alu -13 300 1 341 99 0 62 chr10 75315977 75316058 -65000707 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 207 280 0 0 chr10 75316060 75316110 -65000655 + GA-rich Low_complexity Low_complexity 3 52 0 478 276 89 35 chr10 75316276 75316479 -65000286 - MIR SINE MIR -1 261 48 197 183 0 133 chr10 75316494 75316554 -65000211 - L2 LINE L2 -833 2481 2430 430 199 37 176 chr10 75316621 75316714 -65000051 - MIR SINE MIR -1 261 157 1214 106 34 83 chr10 75316714 75316767 -64999998 + L1MA8 LINE L1 6039 6093 -198 1493 159 144 0 chr10 75316767 75316889 -64999876 + AluSx SINE Alu 1 104 -208 414 0 0 0 chr10 75316889 75316935 -64999830 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1493 159 144 0 chr10 75316935 75317069 -64999696 + AluSx SINE Alu 104 294 -18 1214 106 34 83 chr10 75317069 75317279 -64999486 + L1MA8 LINE L1 6093 6289 -2 430 199 37 176 chr10 75317279 75317376 -64999389 - MIR SINE MIR -105 157 102 2032 134 3 16 chr10 75317376 75317683 -64999082 + AluJb SINE Alu 1 303 -9 430 199 37 176 chr10 75317683 75317707 -64999058 - MIR SINE MIR -160 102 76 2335 109 0 6 chr10 75317891 75318202 -64998563 - AluSx SINE Alu -3 309 1 543 312 121 54 chr10 75318527 75318841 -64997924 - L2 LINE L2 -14 3258 2924 1670 179 6 19 chr10 75319101 75319413 -64997352 + AluJo SINE Alu 1 308 -4 339 286 25 17 chr10 75319413 75319532 -64997233 + MIR SINE MIR 143 262 0 2367 96 7 0 chr10 75320687 75320989 -64995776 - AluSg SINE Alu -6 304 1 1873 145 13 44 chr10 75320993 75321310 -64995455 - AluJb SINE Alu -1 311 5 331 111 19 0 chr10 75321346 75321400 -64995365 + AluJ/FLAM SINE Alu 3 57 -245 833 234 67 35 chr10 75322175 75322425 -64994340 - MER46C DNA MER2_type -6 332 69 2174 138 0 0 chr10 75322425 75322721 -64994044 - AluSx SINE Alu -16 296 1 833 234 67 35 chr10 75322721 75322782 -64993983 - MER46C DNA MER2_type -269 69 11 204 254 32 0 chr10 75323939 75324002 -64992763 + (TATG)n Simple_repeat Simple_repeat 4 68 0 2097 104 15 15 chr10 75324002 75324340 -64992425 + MER4B LTR ERV1 1 338 -272 1168 240 178 22 chr10 75324515 75324596 -64992169 - L1ME3A LINE L1 -187 5983 5916 2231 129 0 3 chr10 75324596 75324905 -64991860 + AluSx SINE Alu 3 310 -2 1168 240 178 22 chr10 75324905 75325285 -64991480 - L1ME3A LINE L1 -254 5916 5450 1759 130 45 45 chr10 75325345 75325637 -64991128 + AluSx SINE Alu 5 296 -16 2112 112 14 0 chr10 75325637 75325950 -64990815 + AluSx SINE Alu 1 317 0 349 211 89 22 chr10 75326351 75326441 -64990324 + MIR SINE MIR 58 153 -109 501 266 46 75 chr10 75326501 75326742 -64990023 + L2 LINE L2 2829 3062 -210 267 220 0 51 chr10 75326847 75326906 -64989859 + L2 LINE L2 3217 3272 0 1779 161 7 18 chr10 75326998 75327284 -64989481 + AluSx SINE Alu 1 283 -29 645 67 33 0 chr10 75327402 75327492 -64989273 - AluY SINE Alu -217 94 2 283 162 59 15 chr10 75327565 75327633 -64989132 - MIR SINE MIR -64 198 128 374 321 18 0 chr10 75328304 75328416 -64988349 - L2 LINE L2 -23 3249 3136 477 313 18 40 chr10 75329974 75330198 -64986567 + MIR SINE MIR 44 262 0 563 276 15 0 chr10 75331546 75331680 -64985085 - L2 LINE L2 0 3272 3137 217 379 107 0 chr10 75332136 75332276 -64984489 - L2 LINE L2 -236 3036 2882 1651 157 45 51 chr10 75332451 75332764 -64984001 - AluJb SINE Alu 0 312 2 366 325 138 0 chr10 75332895 75333055 -64983710 - MER102a DNA MER1_type 0 330 149 1002 194 16 121 chr10 75333081 75333372 -64983393 + LTR16C LTR ERVL 110 430 -61 2041 142 0 3 chr10 75333372 75333668 -64983097 - AluSx SINE Alu -17 295 1 1873 143 63 3 chr10 75333668 75333955 -64982810 - AluJo SINE Alu -8 304 1 1002 194 16 121 chr10 75333955 75334043 -64982722 + LTR16C LTR ERVL 428 450 -41 363 145 14 14 chr10 75334044 75334113 -64982652 + LTR16C LTR ERVL 420 488 -3 1641 189 36 3 chr10 75334145 75334446 -64982319 - AluJo SINE Alu -1 311 1 719 58 0 0 chr10 75334663 75334750 -64982015 - AluY SINE Alu -222 88 2 215 284 239 0 chr10 75334756 75334844 -64981921 + MIR SINE MIR 125 233 -29 232 239 0 0 chr10 75337346 75337392 -64979373 + GA-rich Low_complexity Low_complexity 1 46 0 686 284 6 16 chr10 75338923 75339106 -64977659 + MER5A DNA MER1_type 8 188 -1 243 305 84 0 chr10 75339402 75339497 -64977268 - L2 LINE L2 -3 3310 3208 250 363 30 15 chr10 75339953 75340088 -64976677 - MIR3 SINE MIR -65 143 7 2231 105 10 3 chr10 75340271 75340576 -64976189 - AluSq SINE Alu -6 307 1 207 0 0 0 chr10 75341035 75341058 -64975707 + (CA)n Simple_repeat Simple_repeat 2 24 0 1597 129 27 117 chr10 75341213 75341546 -64975219 + AluYb8 SINE Alu 5 307 -11 1815 157 4 11 chr10 75341559 75341840 -64974925 + AluSx SINE Alu 1 279 -33 517 139 66 16 chr10 75341961 75342083 -64974682 - L1MB2 LINE L1 -7 6164 6037 367 125 0 11 chr10 75342092 75342160 -64974605 - Alu SINE Alu -250 51 1 2798 141 64 34 chr10 75342160 75342726 -64974039 - L1MB2 LINE L1 -128 6043 5461 194 306 60 52 chr10 75342762 75342896 -64973869 + L2 LINE L2 3137 3271 -1 1973 137 10 26 chr10 75343397 75343703 -64973062 - AluSx SINE Alu -11 301 1 807 174 101 7 chr10 75344399 75344548 -64972217 - FRAM SINE Alu -12 164 2 22 35 0 0 chr10 75344561 75344590 -64972175 + AT_rich Low_complexity Low_complexity 1 29 0 645 271 75 104 chr10 75344590 75344808 -64971957 - L1ME4a LINE L1 -6 6115 5913 2320 95 7 0 chr10 75344808 75345102 -64971663 - AluSc SINE Alu -13 296 1 645 271 75 104 chr10 75345102 75345285 -64971480 - L1ME4a LINE L1 -208 5913 5726 722 161 8 24 chr10 75345292 75345416 -64971349 - FLAM_A SINE Alu -11 122 1 333 286 11 66 chr10 75345419 75345447 -64971318 - L1ME4a LINE L1 -366 5755 5727 1927 168 13 7 chr10 75345447 75345756 -64971009 - AluJo SINE Alu -1 311 1 333 286 11 66 chr10 75345756 75345909 -64970856 - L1ME4a LINE L1 -394 5727 5584 264 242 101 31 chr10 75345944 75346080 -64970685 - L1M2 LINE L1 -672 5449 5327 2128 108 7 10 chr10 75346094 75346391 -64970374 - AluSx SINE Alu -16 296 1 2026 144 0 7 chr10 75346394 75346692 -64970073 - AluSx SINE Alu -16 296 1 1918 286 68 22 chr10 75346715 75347345 -64969420 - MLT2F LTR ERVL -2 661 3 1687 126 0 8 chr10 75347378 75347636 -64969129 - AluSx SINE Alu 0 301 46 844 243 50 0 chr10 75347684 75347902 -64968863 + L1ME LINE L1 5357 5585 -577 2029 61 0 4 chr10 75348023 75348268 -64968497 + AluY SINE Alu 65 308 -3 2642 42 7 0 chr10 75348270 75348577 -64968188 + AluY SINE Alu 1 309 -2 325 295 88 14 chr10 75348647 75348841 -64967924 + MIR SINE MIR 1 203 -59 386 208 20 20 chr10 75349388 75349489 -64967276 - LTR16B LTR ERVL 0 464 364 23 68 0 0 chr10 75350382 75350426 -64966339 + AT_rich Low_complexity Low_complexity 1 44 0 319 290 90 7 chr10 75350492 75350637 -64966128 + MIR SINE MIR 48 204 -58 34 0 0 0 chr10 75351026 75351060 -64965705 + AT_rich Low_complexity Low_complexity 1 34 0 837 183 0 0 chr10 75351090 75351221 -64965544 - FLAM_A SINE Alu -1 132 2 871 301 51 39 chr10 75351270 75351702 -64965063 - MLT1K LTR MaLR 0 588 152 840 203 0 6 chr10 75351802 75351960 -64964805 - AluJb SINE Alu -117 195 39 338 251 108 67 chr10 75352342 75352537 -64964228 - L1MEc LINE L1 -4483 2028 1741 652 141 0 70 chr10 75352648 75352790 -64963975 + MER7A DNA MER2_type 1 130 -216 225 225 0 14 chr10 75353100 75353171 -64963594 - L1MEc LINE L1 -4833 1593 1524 266 192 13 64 chr10 75353172 75353250 -64963515 + MLT2B1 LTR ERVL 412 485 -35 446 0 19 0 chr10 75353259 75353313 -64963452 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 785 307 23 28 chr10 75353357 75353709 -64963056 - L1MEc LINE L1 -5801 806 457 234 228 0 0 chr10 75353886 75353943 -64962822 + MLT1L LTR MaLR 545 601 -14 1205 143 6 0 chr10 75353943 75354111 -64962654 - AluSg/x SINE Alu -12 298 130 2355 110 0 0 chr10 75354111 75354420 -64962345 - AluSg1 SINE Alu 0 309 1 204 114 0 29 chr10 75354440 75354475 -64962290 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 2665 145 11 71 chr10 75355053 75355173 -64961592 - L1MB7 LINE L1 -9 6175 6049 1949 152 0 3 chr10 75355173 75355463 -64961302 - AluJb SINE Alu -13 299 11 2665 145 11 71 chr10 75355463 75355855 -64960910 - L1MB7 LINE L1 -135 6049 5699 2199 118 3 0 chr10 75355855 75356151 -64960614 - AluSg SINE Alu -13 297 1 2665 145 11 71 chr10 75356151 75356211 -64960554 - L1MB7 LINE L1 -485 5699 5637 2276 112 3 0 chr10 75356223 75356526 -64960239 - AluSp SINE Alu -9 304 1 728 216 89 51 chr10 75356679 75356730 -64960035 + MIR SINE MIR 18 66 -196 1986 86 4 0 chr10 75356730 75357001 -64959764 + AluSg SINE Alu 36 307 0 728 216 89 51 chr10 75357001 75357184 -64959581 + MIR SINE MIR 66 262 0 954 181 13 0 chr10 75357185 75357340 -64959425 + FRAM SINE Alu 1 157 -9 21 0 0 0 chr10 75357401 75357422 -64959343 + AT_rich Low_complexity Low_complexity 1 21 0 3249 165 21 25 chr10 75358337 75358700 -64958065 - L1MB8 LINE L1 -5 6173 5813 2303 100 21 0 chr10 75358700 75358991 -64957774 + AluSg SINE Alu 1 297 -13 3249 165 21 25 chr10 75358991 75359257 -64957508 - L1MB8 LINE L1 -365 5813 5547 1496 172 8 89 chr10 75359647 75360030 -64956735 - MLT1A2 LTR MaLR -18 356 5 2502 92 0 3 chr10 75360156 75360470 -64956295 - AluSq SINE Alu 0 313 1 399 275 89 25 chr10 75360609 75360786 -64955979 - MIR SINE MIR -44 218 33 543 220 23 8 chr10 75362105 75362237 -64954528 - MLT1D LTR MaLR -371 134 1 662 121 0 0 chr10 75362432 75362523 -64954242 + FLAM SINE Alu 42 132 -11 1954 145 0 13 chr10 75363619 75363922 -64952843 - AluJb SINE Alu -13 299 1 2346 86 0 3 chr10 75364348 75364640 -64952125 + AluSg SINE Alu 1 291 -19 320 268 105 42 chr10 75364701 75364807 -64951958 - L1ME3A LINE L1 -1 6169 6071 2100 144 0 7 chr10 75364807 75365113 -64951652 + AluJb SINE Alu 1 304 -8 320 268 105 42 chr10 75365113 75365196 -64951569 - L1ME3A LINE L1 -99 6071 5968 2191 121 0 3 chr10 75365261 75365558 -64951207 - AluSx SINE Alu -10 302 7 475 245 88 85 chr10 75365742 75365924 -64950841 + L1M2 LINE L1 5217 5402 -898 1336 167 167 0 chr10 75365924 75366041 -64950724 + AluJo SINE Alu 1 97 -215 243 0 0 0 chr10 75366041 75366068 -64950697 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1336 167 167 0 chr10 75366068 75366201 -64950564 + AluJo SINE Alu 97 293 -19 475 245 88 85 chr10 75366201 75366374 -64950391 + L1M2 LINE L1 5402 5573 -727 7241 137 86 53 chr10 75366390 75367907 -64948858 + pTR5 LTR ERV1 142 2295 -143 2223 96 10 7 chr10 75369003 75369305 -64947460 + AluSx SINE Alu 1 303 -9 1838 108 0 4 chr10 75369447 75369724 -64947041 + AluSg/x SINE Alu 65 340 0 1151 156 9 0 chr10 75369725 75369936 -64946829 + L1MD3 LINE L1 7770 7982 -13 2021 111 56 3 chr10 75369944 75370232 -64946533 + AluSc SINE Alu 1 303 -6 378 295 67 75 chr10 75370249 75370503 -64946262 + L1ME4a LINE L1 5870 6121 0 2234 118 0 16 chr10 75370510 75370825 -64945940 + AluSx SINE Alu 3 312 0 1065 116 17 29 chr10 75371211 75371384 -64945381 - AluSg/x SINE Alu -1 311 141 459 0 0 0 chr10 75371385 75371436 -64945329 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1879 176 0 3 chr10 75371436 75371720 -64945045 - AluJb SINE Alu -29 283 1 1483 108 0 0 chr10 75371725 75371919 -64944846 - AluSg/x SINE Alu -11 301 108 1912 167 10 13 chr10 75372996 75373307 -64943458 + AluJo SINE Alu 1 310 -2 1645 156 14 18 chr10 75373513 75373796 -64942969 + AluJo SINE Alu 14 295 -17 309 214 36 48 chr10 75373934 75374018 -64942747 - L3 LINE CR1 -5 1572 1490 2136 123 0 13 chr10 75374580 75374922 -64941843 + AluSx SINE Alu 1 312 0 234 269 86 11 chr10 75374934 75375027 -64941738 + MIR SINE MIR 161 260 -2 * 633 258 106 70 chr10 75375009 75375516 -64941249 + L2 LINE L2 2704 3232 -40 2158 139 3 0 chr10 75375785 75376094 -64940671 - AluSx SINE Alu -2 310 1 1570 96 5 14 chr10 75376469 75376678 -64940087 - AluSg/x SINE Alu -18 292 86 2026 119 7 11 chr10 75377398 75377683 -64939082 - AluSx SINE Alu -14 298 15 2720 175 48 56 chr10 75377691 75378638 -64938127 + LTR13 LTR ERVK 16 1007 0 1428 159 26 17 chr10 75378667 75378969 -64937796 - L1MA6 LINE L1 -1 6299 5995 2007 169 174 18 chr10 75379031 75379141 -64937624 + MLT1D LTR MaLR 1 93 -412 2071 113 38 10 chr10 75379141 75379432 -64937333 - AluSx SINE Alu -13 299 1 2007 169 174 18 chr10 75379432 75379758 -64937007 + MLT1D LTR MaLR 93 505 0 1185 150 0 0 chr10 75379981 75380154 -64936611 - AluSg/x SINE Alu -3 309 137 1335 170 106 35 chr10 75380169 75380451 -64936314 - AluJb SINE Alu 0 302 1 634 244 52 35 chr10 75380459 75380631 -64936134 + MER5B DNA MER1_type 4 178 0 514 275 35 7 chr10 75380653 75380795 -64935970 - MER5A DNA MER1_type -9 180 35 338 246 14 17 chr10 75380887 75381036 -64935729 + MER5B DNA MER1_type 1 186 -3 878 192 12 23 chr10 75381047 75381219 -64935546 - MER5A DNA MER1_type -1 188 19 2216 106 3 7 chr10 75381244 75381537 -64935228 + AluSx SINE Alu 1 292 -20 2465 86 0 0 chr10 75381932 75382234 -64934531 + AluSg SINE Alu 1 302 -8 195 42 0 0 chr10 75382251 75382275 -64934490 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 726 188 0 0 chr10 75382275 75382392 -64934373 - FLAM_A SINE Alu -16 117 1 425 297 170 37 chr10 75383169 75383870 -64932895 + L2 LINE L2 2465 3272 0 1961 154 0 33 chr10 75383957 75384263 -64932502 + AluJb SINE Alu 1 296 -16 400 91 0 15 chr10 75384294 75384360 -64932405 - AluSp/q SINE Alu -11 302 238 870 326 57 20 chr10 75384401 75384892 -64931873 - L2 LINE L2 -737 2577 2069 246 316 107 60 chr10 75385325 75385559 -64931206 + L2 LINE L2 2838 3082 -190 2335 108 0 7 chr10 75385694 75386000 -64930765 + AluSg1 SINE Alu 3 306 -3 765 164 0 8 chr10 75386068 75386202 -64930563 - FLAM_C SINE Alu 0 133 1 1705 140 14 59 chr10 75386247 75386557 -64930208 + L1MB8 LINE L1 5829 6122 -56 726 214 0 0 chr10 75386557 75386688 -64930077 + FLAM_A SINE Alu 1 131 -2 1705 140 14 59 chr10 75386688 75386734 -64930031 + L1MB8 LINE L1 6122 6169 -9 981 157 6 6 chr10 75386736 75386895 -64929870 - FRAM SINE Alu -7 159 1 2321 81 3 7 chr10 75387306 75387603 -64929162 + AluSg SINE Alu 1 296 -14 2431 82 3 0 chr10 75387608 75387902 -64928863 + AluSc SINE Alu 1 295 -14 769 236 21 5 chr10 75388024 75388215 -64928550 + MIR SINE MIR 28 221 -41 2194 120 0 10 chr10 75388217 75388518 -64928247 + AluSx SINE Alu 1 298 -14 2485 71 0 10 chr10 75388518 75388827 -64927938 + AluSg SINE Alu 1 306 -4 1339 172 9 21 chr10 75389543 75389776 -64926989 + AluJo SINE Alu 61 290 -22 782 270 86 9 chr10 75390014 75390247 -64926518 + MIR SINE MIR 12 262 0 470 314 0 28 chr10 75390608 75390806 -64925959 + MIR SINE MIR 18 206 -56 1862 173 17 10 chr10 75390885 75391186 -64925579 - AluJb SINE Alu -8 304 2 2291 92 10 0 chr10 75392070 75392363 -64924402 - AluSx SINE Alu -15 297 2 276 258 61 0 chr10 75393166 75393232 -64923533 + L2 LINE L2 3244 3313 0 1844 126 8 0 chr10 75393279 75393540 -64923225 + AluSq SINE Alu 44 306 -7 210 222 56 0 chr10 75393540 75393585 -64923180 - MIR SINE MIR -146 116 66 375 313 141 16 chr10 75394168 75394360 -64922405 + MIR SINE MIR 1 216 -46 2700 40 0 0 chr10 75394397 75394697 -64922068 + AluY SINE Alu 1 300 -11 581 170 179 0 chr10 75394700 75394812 -64921953 + FLAM_C SINE Alu 1 132 -1 419 242 94 11 chr10 75396114 75396417 -64920348 + MER110A LTR ERV1 132 479 -1 22 0 0 0 chr10 75396895 75396917 -64919848 + GC_rich Low_complexity Low_complexity 1 22 0 2158 138 3 0 chr10 75398383 75398681 -64918084 + AluSx SINE Alu 1 299 -13 465 303 55 36 chr10 75400221 75400386 -64916379 - MER91A DNA MER1_type -28 168 1 2005 134 3 33 chr10 75401773 75402080 -64914685 + AluSx SINE Alu 2 299 -13 30 59 0 0 chr10 75403231 75403282 -64913483 + AT_rich Low_complexity Low_complexity 1 51 0 461 311 0 8 chr10 75403496 75403618 -64913147 - MER91A DNA MER1_type -74 122 2 2157 141 13 0 chr10 75403699 75404005 -64912760 + AluJo SINE Alu 1 310 -2 2225 81 3 11 chr10 75404029 75404344 -64912421 + AluSx SINE Alu 1 313 0 365 297 41 14 chr10 75404663 75404808 -64911957 - MER5B DNA MER1_type -29 149 1 2006 118 4 4 chr10 75404989 75405260 -64911505 - AluSx SINE Alu -16 296 26 692 259 70 41 chr10 75405314 75405478 -64911287 + MIR SINE MIR 13 189 -73 1971 121 3 35 chr10 75405478 75405788 -64910977 + AluSx SINE Alu 1 301 0 692 259 70 41 chr10 75405788 75405865 -64910900 + MIR SINE MIR 189 262 0 321 68 0 0 chr10 75506109 75506153 -64810612 + (CA)n Simple_repeat Simple_repeat 2 45 0 1510 183 19 0 chr10 75506598 75506866 -64809899 - AluJb SINE Alu -12 300 28 847 201 82 15 chr10 75507973 75508242 -64808523 + AluJo SINE Alu 1 287 -15 407 296 0 10 chr10 75508471 75508569 -64808196 - HERV16 LTR ERVL -2049 2947 2851 1401 165 0 77 chr10 75508641 75508913 -64807852 + AluJo SINE Alu 43 293 -19 239 130 0 130 chr10 75508915 75508984 -64807781 + L1M4 LINE L1 4982 5041 -1105 2189 186 139 40 chr10 75509062 75509566 -64807199 + MLT2B3 LTR ERVL 1 554 0 1309 165 9 0 chr10 75511340 75511552 -64805213 - AluJb SINE Alu -7 305 92 425 145 0 14 chr10 75511599 75511668 -64805097 + AluS SINE Alu 2 69 -241 468 170 40 10 chr10 75512954 75513054 -64803711 - L1MA8 LINE L1 -43 6248 6146 1704 168 34 3 chr10 75513066 75513387 -64803378 - MER44D DNA MER2_type 0 609 9 434 251 43 89 chr10 75513396 75513631 -64803134 + L1ME3A LINE L1 5778 6001 -169 841 193 5 25 chr10 75513857 75514059 -64802706 + MER1B DNA MER1_type 1 198 -99 506 106 106 0 chr10 75514184 75514269 -64802496 - Tigger4(Zombi) DNA MER2_type -93 2638 2545 2341 81 3 16 chr10 75514269 75514579 -64802186 - AluY SINE Alu -5 306 1 1421 252 86 29 chr10 75514783 75515330 -64801435 + MER6 DNA MER2_type 20 597 -268 2000 143 4 0 chr10 75516050 75516357 -64800408 - AluSx SINE Alu 0 308 1 862 186 78 43 chr10 75516387 75516709 -64800056 + HSMAR2 DNA Mariner 1 333 -969 261 128 0 0 chr10 75516876 75516915 -64799850 - MIR SINE MIR -4 258 220 1495 202 64 19 chr10 75516923 75517074 -64799691 - HsTC2 DNA Tc2 2 1900 1757 1993 131 7 23 chr10 75517074 75517379 -64799386 + AluSx SINE Alu 1 300 -12 1495 202 64 19 chr10 75517379 75517648 -64799117 - HsTC2 DNA Tc2 -141 1757 1285 3548 162 19 3 chr10 75518123 75518742 -64798023 + Tigger7 DNA MER2_type 1 629 -1858 2201 114 10 0 chr10 75518744 75519042 -64797723 + AluSx SINE Alu 1 301 -11 340 282 55 9 chr10 75520691 75520801 -64795964 - HAL1b LINE L1 -948 400 286 2273 74 0 28 chr10 75522003 75522328 -64794437 - L1PA6 LINE L1 -10 6144 5829 7722 46 1 6 chr10 75522329 75523368 -64793397 - L1P LINE L1 -2303 3843 2810 183 326 125 56 chr10 75523898 75524042 -64792723 - L2 LINE L2 0 3272 3119 1494 136 47 8 chr10 75524620 75524855 -64791910 - AluSg/x SINE Alu 0 312 69 1849 180 11 3 chr10 75526097 75526470 -64790295 - L1P3 LINE L1 -5758 703 10 1924 162 16 0 chr10 75526472 75526775 -64789990 - AluJo SINE Alu -4 308 1 263 237 144 31 chr10 75528380 75528477 -64788288 - MIR3 SINE MIR -9 199 92 415 206 59 20 chr10 75528726 75528828 -64787937 + MIR SINE MIR 90 195 -67 1024 163 0 0 chr10 75528841 75529001 -64787764 + AluJb SINE Alu 139 298 -14 333 0 0 0 chr10 75529940 75529977 -64786788 + (TG)n Simple_repeat Simple_repeat 2 38 0 775 202 0 0 chr10 75529981 75530110 -64786655 - FLAM_C SINE Alu 0 133 5 1799 146 13 26 chr10 75530206 75530508 -64786257 - AluJb SINE Alu -12 300 3 329 115 0 16 chr10 75530678 75530739 -64786026 + (GA)n Simple_repeat Simple_repeat 1 60 0 1521 118 4 44 chr10 75530876 75531148 -64785617 + AluSx SINE Alu 1 261 -51 187 320 0 0 chr10 75532351 75532401 -64784364 - L2 LINE L2 -2 3270 3221 297 273 0 0 chr10 75533423 75533489 -64783276 + MIR SINE MIR 46 111 -151 222 200 0 0 chr10 75533495 75533535 -64783230 + L3 LINE CR1 1536 1575 -2 1468 137 56 72 chr10 75535196 75535625 -64781140 - L1MCa LINE L1 -3949 2477 2158 2099 151 0 10 chr10 75535627 75535932 -64780833 + AluJb SINE Alu 1 302 -10 1247 157 15 42 chr10 75535932 75536069 -64780696 + L1MB7 LINE L1 5598 5726 -458 2029 128 3 13 chr10 75536069 75536367 -64780398 + AluSx SINE Alu 1 295 -17 1247 157 15 42 chr10 75536367 75536490 -64780275 + L1MB7 LINE L1 5726 5851 -333 547 509 92 0 chr10 75536490 75536761 -64780004 - AluSx SINE Alu -6 296 1 1754 166 0 0 chr10 75537161 75537426 -64779339 + AluSx SINE Alu 3 267 -45 270 0 0 0 chr10 75537442 75537472 -64779293 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 332 268 0 21 chr10 75537844 75537941 -64778824 - L2 LINE L2 -41 3231 3137 498 335 65 50 chr10 75538173 75538756 -64778009 - L2 LINE L2 -497 2817 2131 1727 120 33 7 chr10 75539004 75539280 -64777485 - AluSg SINE Alu 0 310 28 1796 109 117 7 chr10 75539445 75539719 -64777046 - AluSx SINE Alu -8 304 1 506 163 0 0 chr10 75540987 75541067 -64775698 + AluJ/FLAM SINE Alu 2 81 -231 1056 128 191 15 chr10 75542753 75542957 -64773808 - Tigger3(Golem) DNA MER2_type 0 3029 2790 289 218 36 0 chr10 75542958 75543013 -64773752 - Tigger3(Golem) DNA MER2_type -2972 57 1 1564 104 5 22 chr10 75543351 75543573 -64773192 + AluSq SINE Alu 1 218 -95 675 213 75 23 chr10 75543723 75543897 -64772868 - MER58A DNA MER1_type -38 186 4 1775 264 158 24 chr10 75543904 75544818 -64771947 + L2 LINE L2 1661 2696 -618 1323 204 63 24 chr10 75545230 75545576 -64771189 + MLT1E1 LTR MaLR 215 652 -2 244 292 14 0 chr10 75545726 75545798 -64770967 + L3 LINE CR1 1490 1562 -15 337 209 175 25 chr10 75546431 75546596 -64770169 - MIR SINE MIR -38 224 37 6452 63 3 29 chr10 75547191 75548793 -64767972 - L1PA6 LINE L1 -286 5868 4315 432 184 18 9 chr10 75549392 75549501 -64767264 + (CA)n Simple_repeat Simple_repeat 1 110 0 557 205 190 34 chr10 75549615 75549820 -64766945 + MIR SINE MIR 20 256 -6 382 261 175 0 chr10 75551825 75552005 -64764760 - MIR SINE MIR -14 248 33 667 59 0 0 chr10 75552113 75552198 -64764567 + AluS SINE Alu 1 85 -228 13044 94 14 21 chr10 75552319 75554323 -64762442 + L1P LINE L1 730 2718 -3428 269 334 84 28 chr10 75554478 75554798 -64761967 - L2 LINE L2 -736 2578 2241 1474 123 0 0 chr10 75555746 75555949 -64760816 - AluSg/x SINE Alu 0 312 110 290 235 105 52 chr10 75556680 75556833 -64759932 - MER5A DNA MER1_type -22 167 7 318 26 0 0 chr10 75556834 75556873 -64759892 + (GA)n Simple_repeat Simple_repeat 1 39 0 443 296 104 50 chr10 75557440 75558089 -64758676 - L1M4 LINE L1 -2099 4047 3435 2165 101 17 7 chr10 75558089 75558377 -64758388 + AluSq SINE Alu 1 291 -22 443 296 104 50 chr10 75558377 75558958 -64757807 - L1M4 LINE L1 -2711 3435 2750 830 204 0 43 chr10 75559114 75559300 -64757465 + AluJo SINE Alu 7 184 -128 225 45 45 75 chr10 75559393 75559460 -64757305 + (TCTCC)n Simple_repeat Simple_repeat 2 66 0 381 256 28 50 chr10 75559525 75559772 -64756993 + CT-rich Low_complexity Low_complexity 1 241 0 440 129 11 86 chr10 75561461 75561554 -64755211 - MLT1B LTR MaLR -304 86 1 398 303 24 21 chr10 75561557 75561720 -64755045 - MIR SINE MIR -45 163 3 1586 202 40 54 chr10 75561816 75562208 -64754557 - MSTD LTR MaLR -1 395 1 2322 93 0 3 chr10 75562558 75562847 -64753918 - AluSc SINE Alu -21 288 1 213 333 24 24 chr10 75563857 75563983 -64752782 + L2 LINE L2 2722 2847 -467 219 287 73 67 chr10 75564372 75564522 -64752243 + L2 LINE L2 3161 3311 -2 315 168 35 182 chr10 75565808 75566011 -64750754 + L1MC4 LINE L1 7864 8036 -6 386 230 153 24 chr10 75566022 75566231 -64750534 + HAL1 LINE L1 1529 1764 -743 4115 226 20 48 chr10 75566475 75567598 -64749167 + L1M4 LINE L1 1 1092 -5450 1825 132 46 36 chr10 75568059 75568362 -64748403 - AluSx SINE Alu -6 306 1 1644 156 74 4 chr10 75569123 75569392 -64747373 + AluJo SINE Alu 7 294 -18 225 0 0 0 chr10 75569593 75569618 -64747147 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2272 87 0 0 chr10 75569620 75569896 -64746869 - AluSx SINE Alu -36 276 1 473 249 113 17 chr10 75570046 75570116 -64746649 - MIR SINE MIR -6 256 194 1909 169 0 17 chr10 75570116 75570412 -64746353 - AluJo SINE Alu -21 291 1 473 249 113 17 chr10 75570412 75570518 -64746247 - MIR SINE MIR -68 194 63 469 227 27 0 chr10 75571582 75571692 -64745073 + MER81 DNA DNA 1 113 -1 328 301 9 9 chr10 75572438 75572551 -64744214 + MIR3 SINE MIR 46 158 -50 811 212 22 50 chr10 75572968 75573190 -64743575 + MIR SINE MIR 31 246 -16 355 160 53 0 chr10 75573317 75573392 -64743373 - MIR SINE MIR -71 191 113 418 210 41 142 chr10 75573928 75574147 -64742618 + MER117 DNA MER1_type 1 197 0 555 290 21 16 chr10 75574526 75574712 -64742053 + MER117 DNA MER1_type 11 197 0 352 61 0 0 chr10 75575041 75575090 -64741675 + MADE1 DNA Mariner 27 75 -5 259 247 13 26 chr10 75575271 75575348 -64741417 + MIR SINE MIR 120 195 -67 1160 245 32 20 chr10 75575538 75575952 -64740813 - L1PA15-16 LINE L1 -3838 3011 2592 237 183 0 0 chr10 75577831 75577891 -64738874 + (TA)n Simple_repeat Simple_repeat 1 60 0 2327 103 0 0 chr10 75579765 75580056 -64736709 - AluSx SINE Alu -21 291 1 500 271 7 14 chr10 75580116 75580256 -64736509 + L2 LINE L2 2682 2820 -494 458 275 185 6 chr10 75580280 75580447 -64736318 - L1ME LINE L1 -2608 3472 3270 2369 73 28 0 chr10 75580447 75580733 -64736032 - AluSc SINE Alu -15 294 1 1901 138 0 21 chr10 75580809 75581100 -64735665 - AluJb SINE Alu -27 285 1 180 311 0 0 chr10 75581146 75581191 -64735574 + L2 LINE L2 3170 3214 -99 561 70 93 0 chr10 75581372 75581458 -64735307 - AluSc SINE Alu -14 295 202 3333 250 54 26 chr10 75581563 75582951 -64733814 - L1ME LINE L1 -4653 1427 3 410 348 59 8 chr10 75583477 75583713 -64733052 - MIR SINE MIR -1 261 14 1437 184 134 50 chr10 75584859 75585266 -64731499 + L1ME2 LINE L1 5724 6161 -3 250 167 0 0 chr10 75585315 75585357 -64731408 - Alu SINE Alu -9 292 251 684 128 0 0 chr10 75585457 75585559 -64731206 + AluSg/x SINE Alu 197 298 -11 997 211 8 8 chr10 75585560 75585811 -64730954 + L1M4 LINE L1 1338 1588 -4954 1549 140 22 0 chr10 75585811 75586039 -64730726 + AluSg/x SINE Alu 80 312 0 1000 240 128 0 chr10 75586055 75586351 -64730414 + L1M4 LINE L1 2610 2943 -3701 1967 279 64 25 chr10 75586355 75586982 -64729783 + L1M2c LINE L1 7 657 -6132 3627 203 34 15 chr10 75587333 75588320 -64728445 + L1M2c LINE L1 1270 2270 -4519 931 156 12 17 chr10 75588321 75588494 -64728271 + LTR9 LTR ERV1 441 612 0 737 163 56 19 chr10 75588611 75588771 -64727994 + HUERS-P3 LTR ERV1 362 527 -8392 868 182 11 28 chr10 75588771 75588947 -64727818 + LTR9 LTR ERV1 357 529 -83 1484 218 104 28 chr10 75588955 75589089 -64727676 + L1M1 LINE L1 2702 2824 -4741 1862 141 54 3 chr10 75589089 75589386 -64727379 + AluSx SINE Alu 1 312 0 1484 218 104 28 chr10 75589386 75590058 -64726707 + L1M1 LINE L1 2824 3573 -3992 626 228 0 0 chr10 75590060 75590183 -64726582 + FLAM_C SINE Alu 10 132 -11 346 146 29 29 chr10 75590195 75590298 -64726467 + GA-rich Low_complexity Low_complexity 4 106 0 561 245 27 7 chr10 75590309 75590456 -64726309 + L1M1 LINE L1 5022 5171 -2394 1451 56 0 56 chr10 75590818 75591031 -64725734 + AluY SINE Alu 11 211 -100 282 29 0 0 chr10 75591164 75591199 -64725566 + (TG)n Simple_repeat Simple_repeat 2 36 0 2264 113 0 3 chr10 75591308 75591609 -64725156 - AluSq SINE Alu -13 300 1 2182 110 19 19 chr10 75592089 75592398 -64724367 - AluSq SINE Alu -4 309 1 851 122 122 72 chr10 75592398 75592477 -64724288 + MER46A DNA MER2_type 46 120 -2611 2007 151 3 3 chr10 75592477 75592775 -64723990 - AluJo SINE Alu -14 298 1 851 122 122 72 chr10 75592775 75592875 -64723890 + MER46A DNA MER2_type 120 234 -2 261 0 0 0 chr10 75593464 75593493 -64723272 + (A)n Simple_repeat Simple_repeat 1 29 0 197 387 36 0 chr10 75593547 75593658 -64723107 - L2 LINE L2 -207 3065 2951 258 289 13 0 chr10 75594143 75594219 -64722546 - MIR SINE MIR 0 262 186 267 261 11 11 chr10 75594331 75594419 -64722346 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 38 61 0 0 chr10 75594449 75594515 -64722250 + AT_rich Low_complexity Low_complexity 1 66 0 244 304 0 33 chr10 75594523 75594615 -64722150 - L1ME1 LINE L1 -30 6136 6048 239 385 15 0 chr10 75595059 75595189 -64721576 - L3b LINE CR1 -264 1319 1188 591 241 10 101 chr10 75595191 75595398 -64721367 - MER102b DNA MER1_type 0 341 154 1913 161 0 22 chr10 75596048 75596359 -64720406 + AluJb SINE Alu 1 304 -8 378 60 30 15 chr10 75596361 75596428 -64720337 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 241 212 26 88 chr10 75598950 75599063 -64717702 + MIR3 SINE MIR 94 199 -9 858 125 67 0 chr10 75601829 75601949 -64714816 - AluSq/x SINE Alu -185 128 1 989 184 28 28 chr10 75603285 75603503 -64713262 + MER20 DNA MER1_type 2 219 0 2742 86 86 14 chr10 75604346 75604779 -64711986 + MER4C LTR ERV1 1 464 -1 461 199 59 59 chr10 75606082 75606218 -64710547 + L2 LINE L2 3159 3294 -19 546 269 137 22 chr10 75606218 75606445 -64710320 + MER102b DNA MER1_type 89 341 0 196 254 68 0 chr10 75607030 75607089 -64709676 - MIR SINE MIR -17 245 183 398 270 55 55 chr10 75607248 75607411 -64709354 + MIR3 SINE MIR 30 165 -43 265 362 72 7 chr10 75608826 75608964 -64707801 - L2 LINE L2 -1 3312 3166 522 62 25 38 chr10 75609196 75609276 -64707489 + MADE1 DNA Mariner 2 80 0 423 250 45 15 chr10 75609303 75609435 -64707330 - MIR SINE MIR -118 144 9 933 190 19 28 chr10 75609489 75609705 -64707060 - MIR SINE MIR -33 229 16 435 333 65 8 chr10 75609722 75609968 -64706797 - L2 LINE L2 -431 2883 2624 274 259 148 0 chr10 75610212 75610320 -64706445 + L3 LINE CR1 1384 1507 -70 1427 102 5 5 chr10 75611319 75611506 -64705259 + AluSc SINE Alu 108 294 -15 217 248 40 50 chr10 75612431 75612532 -64704233 + MIR SINE MIR 38 137 -71 2340 91 0 7 chr10 75613606 75613913 -64702852 + AluSc SINE Alu 1 305 -4 2418 76 3 28 chr10 75614586 75614903 -64701862 - AluSg SINE Alu -1 309 1 239 274 20 39 chr10 75615380 75615533 -64701232 + CT-rich Low_complexity Low_complexity 3 152 0 190 296 92 20 chr10 75616174 75616272 -64700493 - MIR3 SINE MIR -39 169 65 1067 189 173 24 chr10 75617082 75617453 -64699312 + LTR37A LTR ERV1 1 426 0 328 260 125 0 chr10 75618175 75618271 -64698494 + MIR3 SINE MIR 83 190 -18 247 316 103 0 chr10 75618879 75619033 -64697732 - MIR SINE MIR -46 216 37 268 252 236 24 chr10 75619739 75619866 -64696899 - MIR3 SINE MIR -52 156 3 242 292 150 0 chr10 75624752 75624865 -64691900 - MER94 DNA DNA -4 130 1 198 204 45 0 chr10 75626344 75626388 -64690377 + L2 LINE L2 3217 3262 -10 515 310 52 17 chr10 75627659 75627833 -64688932 - MIR3 SINE MIR -15 193 14 570 162 186 73 chr10 75629285 75629489 -64687276 + ORSL DNA AcHobo 3 229 -46 1561 130 0 22 chr10 75629642 75629873 -64686892 - AluJo SINE Alu 0 312 87 207 250 97 14 chr10 75629875 75629947 -64686818 - MIR SINE MIR -62 146 69 195 42 0 0 chr10 75630565 75630589 -64686176 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 347 55 0 18 chr10 75630857 75630912 -64685853 + (GGAA)n Simple_repeat Simple_repeat 1 54 0 327 264 14 0 chr10 75631106 75631178 -64685587 - MIR SINE MIR -1 261 189 282 260 192 0 chr10 75633150 75633254 -64683511 - MIR3 SINE MIR -23 185 62 899 273 72 33 chr10 75633775 75634172 -64682593 - Charlie8 DNA MER1_type -1022 1395 1 559 206 27 76 chr10 75634338 75634522 -64682243 + MER5B DNA MER1_type 2 176 -2 312 349 86 0 chr10 75637332 75637484 -64679281 - MIR SINE MIR -7 255 91 2323 92 0 0 chr10 75637569 75637862 -64678903 - AluSx SINE Alu -19 293 1 1921 178 0 9 chr10 75639088 75639405 -64677360 + AluJb SINE Alu 1 362 0 237 146 0 21 chr10 75639405 75639453 -64677312 + (GAAAA)n Simple_repeat Simple_repeat 3 180 0 29 0 0 0 chr10 75641878 75641907 -64674858 + AT_rich Low_complexity Low_complexity 1 29 0 2296 149 10 8 chr10 75642721 75643116 -64673649 + MLT1C LTR MaLR 72 467 0 323 252 122 41 chr10 75643182 75643329 -64673436 - MIR3 SINE MIR -37 171 13 1409 241 40 50 chr10 75643335 75643713 -64673052 - MLT1A2 LTR MaLR 0 374 1 605 178 20 14 chr10 75644597 75644743 -64672022 - MER103 DNA DNA -7 159 13 180 0 0 0 chr10 75646195 75646215 -64670550 + (GGA)n Simple_repeat Simple_repeat 3 22 0 191 370 14 0 chr10 75647050 75647123 -64669642 - MIR SINE MIR -87 121 48 286 321 48 30 chr10 75648819 75648987 -64667778 - MIR SINE MIR -12 250 80 182 347 80 0 chr10 75649587 75649662 -64667103 + MIR3 SINE MIR 86 166 -42 698 294 94 0 chr10 75652549 75652784 -64663981 + MIR SINE MIR 6 262 0 282 286 87 31 chr10 75654082 75654244 -64662521 + MIR SINE MIR 17 202 -60 595 318 163 16 chr10 75655016 75655274 -64661491 - L3 LINE CR1 -15 1562 1267 224 263 53 0 chr10 75656034 75656091 -64660674 + MIR SINE MIR 35 94 -168 1061 154 11 15 chr10 75656101 75656333 -64660432 + MSTD LTR MaLR 1 236 -221 1291 196 36 14 chr10 75656512 75656787 -64659978 + MSTD LTR MaLR 116 396 0 314 319 52 7 chr10 75656789 75656924 -64659841 + MIR SINE MIR 121 261 -1 2371 94 0 0 chr10 75657061 75657368 -64659397 + AluSc SINE Alu 3 309 0 266 246 235 4 chr10 75657739 75657968 -64658797 + MLT1G3 LTR MaLR 249 542 0 192 254 36 18 chr10 75658717 75658772 -64657993 + MIR SINE MIR 87 142 -66 180 279 0 0 chr10 75658884 75658927 -64657838 + L3b LINE CR1 1532 1574 -9 219 69 0 0 chr10 75659296 75659325 -64657440 + (A)n Simple_repeat Simple_repeat 1 29 0 235 257 110 64 chr10 75661823 75661932 -64654833 + MIR SINE MIR 38 151 -111 328 372 9 13 chr10 75662042 75662273 -64654492 + MER102b DNA MER1_type 112 341 0 318 372 41 0 chr10 75663330 75663451 -64653314 - MIR SINE MIR -63 145 20 316 326 139 0 chr10 75663821 75663965 -64652800 + MIR SINE MIR 85 248 -14 422 274 8 6 chr10 75664711 75664877 -64651888 + MIR SINE MIR 16 157 -105 * 721 217 133 31 chr10 75664876 75665102 -64651663 - MIR SINE MIR 0 262 14 287 333 122 21 chr10 75665570 75665759 -64651006 + L2 LINE L2 2597 2804 -510 2804 169 54 24 chr10 75665763 75666266 -64650499 - MLT2B1 LTR ERVL -2 518 1 265 363 55 40 chr10 75666415 75666616 -64650149 + MIR SINE MIR 3 206 -56 940 311 52 8 chr10 75666637 75667004 -64649761 - LTR16A LTR ERVL -6 444 62 719 270 47 91 chr10 75667147 75667554 -64649211 + L2 LINE L2 2825 3213 -100 310 306 16 48 chr10 75668124 75668248 -64648517 + MIR SINE MIR 16 135 -73 488 286 14 55 chr10 75668423 75668640 -64648125 - Charlie8 DNA MER1_type -2199 218 11 377 271 19 19 chr10 75668666 75668773 -64647992 + MIR SINE MIR 49 155 -107 362 309 73 0 chr10 75668767 75668877 -64647888 - MIR SINE MIR -2 260 143 * 282 283 222 0 chr10 75670072 75670171 -64646594 + L2 LINE L2 3152 3272 0 557 328 84 8 chr10 75671331 75671569 -64645196 + MIR SINE MIR 4 259 -3 303 232 85 0 chr10 75672425 75672507 -64644258 - MIR SINE MIR -18 244 156 236 325 12 12 chr10 75672703 75672783 -64643982 + L2 LINE L2 3189 3268 -4 731 274 104 13 chr10 75674115 75674414 -64642351 - MLT1J LTR MaLR -173 338 13 470 249 60 49 chr10 75674619 75674804 -64641961 + MER117 DNA MER1_type 8 194 -3 200 343 19 37 chr10 75674810 75674918 -64641847 - L2 LINE L2 -553 2761 2656 316 309 109 6 chr10 75676552 75676717 -64640048 + L2 LINE L2 2642 2823 -491 242 324 0 0 chr10 75676731 75676799 -64639966 - MER5A DNA MER1_type -118 71 4 218 317 0 17 chr10 75677406 75677466 -64639299 + MIR SINE MIR 88 146 -62 310 263 86 86 chr10 75677474 75677846 -64638919 + L1ME3A LINE L1 5569 5940 -230 1162 137 22 31 chr10 75678036 75678358 -64638407 - L1MB8 LINE L1 0 6178 5789 186 309 36 12 chr10 75678670 75678754 -64638011 + L2 LINE L2 2996 3081 -191 257 361 148 13 chr10 75679094 75679249 -64637516 + MIR SINE MIR 2 177 -85 269 354 102 0 chr10 75679641 75679768 -64636997 + MIR SINE MIR 46 185 -77 285 79 0 0 chr10 75679808 75679846 -64636919 + tRNA-Trp tRNA tRNA 1 38 -37 1011 170 59 17 chr10 75681372 75681648 -64635117 - MER1B DNA MER1_type 0 339 1 537 281 54 6 chr10 75681852 75682019 -64634746 - MIR SINE MIR -67 195 21 298 349 78 0 chr10 75682861 75682990 -64633775 - MIR SINE MIR -71 191 53 901 235 54 14 chr10 75683136 75683357 -64633408 - MIR SINE MIR 0 262 33 201 370 46 0 chr10 75685592 75685700 -64631065 - MIR3 SINE MIR -19 189 77 547 289 54 6 chr10 75685758 75685924 -64630841 + MIR SINE MIR 77 250 -12 202 237 53 40 chr10 75685916 75685992 -64630773 - MIR3 SINE MIR -129 79 3 * 239 356 62 14 chr10 75686235 75686381 -64630384 + MIR SINE MIR 110 262 0 222 118 0 0 chr10 75686561 75686595 -64630170 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 388 315 77 51 chr10 75686595 75686803 -64629962 - L2 LINE L2 -13 3300 3082 373 159 0 0 chr10 75686803 75686866 -64629899 - L1MA9 LINE L1 -5 6307 6245 388 315 77 51 chr10 75686866 75686930 -64629835 - L2 LINE L2 -231 3082 3021 998 299 90 25 chr10 75687066 75687575 -64629190 - L2 LINE L2 -337 2977 2436 251 305 76 44 chr10 75688412 75688661 -64628104 + L2 LINE L2 2804 3060 -212 181 349 15 0 chr10 75688743 75688809 -64627956 + L2 LINE L2 3102 3168 -104 632 292 113 37 chr10 75688905 75689442 -64627323 - L2 LINE L2 0 3272 2687 1936 153 47 36 chr10 75689442 75689802 -64626963 + THE1B LTR MaLR 1 364 0 632 292 113 37 chr10 75689802 75689819 -64626946 - L2 LINE L2 -585 2687 2673 254 255 117 0 chr10 75690449 75690543 -64626222 - MIR3 SINE MIR -1 207 103 673 280 15 73 chr10 75690674 75690810 -64625955 + MIR SINE MIR 7 120 -142 959 199 56 10 chr10 75690810 75691006 -64625759 - MER3 DNA MER1_type 0 209 5 673 280 15 73 chr10 75691006 75691138 -64625627 + MIR SINE MIR 120 258 -4 388 291 73 12 chr10 75691478 75691643 -64625122 - L2 LINE L2 -224 3048 2874 193 298 0 0 chr10 75691664 75691711 -64625054 + L2 LINE L2 3218 3264 -8 197 237 0 0 chr10 75691736 75691774 -64624991 + MIR SINE MIR 84 121 -141 565 245 28 0 chr10 75691883 75692026 -64624739 + MIR SINE MIR 111 257 -5 2330 98 0 0 chr10 75692574 75692881 -64623884 - AluSx SINE Alu 0 312 6 333 317 103 0 chr10 75693142 75693287 -64623478 + MER5A DNA MER1_type 30 189 0 210 302 69 26 chr10 75693300 75693416 -64623349 + L2 LINE L2 3107 3227 -45 200 307 0 13 chr10 75694419 75694494 -64622271 + CT-rich Low_complexity Low_complexity 6 79 0 334 299 85 30 chr10 75694563 75694727 -64622038 - MIR SINE MIR -89 173 1 180 271 34 0 chr10 75694797 75694856 -64621909 + MIR SINE MIR 183 243 -19 212 219 14 55 chr10 75694866 75694939 -64621826 + CT-rich Low_complexity Low_complexity 2 71 0 444 279 144 42 chr10 75695702 75695917 -64620848 - MIR SINE MIR 0 262 26 23 0 0 0 chr10 75696887 75696910 -64619855 + AT_rich Low_complexity Low_complexity 1 23 0 263 321 107 14 chr10 75697651 75697791 -64618974 + MIR SINE MIR 1 153 -109 568 226 37 53 chr10 75698125 75698401 -64618364 - LTR16A LTR ERVL -96 354 18 393 262 89 98 chr10 75698726 75698871 -64617894 + L2 LINE L2 2739 2884 -429 902 197 83 0 chr10 75698871 75699003 -64617762 + MER3 DNA MER1_type 1 155 -54 2007 139 0 16 chr10 75699003 75699347 -64617418 - AluSx SINE Alu 0 312 1 902 197 83 0 chr10 75699347 75699407 -64617358 + MER3 DNA MER1_type 155 209 0 393 262 89 98 chr10 75699407 75699684 -64617081 + L2 LINE L2 2884 3184 -129 631 277 49 5 chr10 75699708 75699892 -64616873 - MIR SINE MIR 0 262 71 205 291 0 70 chr10 75699890 75699976 -64616789 + L2 LINE L2 3186 3265 -7 * 412 348 139 35 chr10 75700919 75701402 -64615363 + L1ME4a LINE L1 5588 6120 -1 1601 158 31 24 chr10 75701676 75701967 -64614798 + AluJb SINE Alu 1 293 -19 269 270 20 9 chr10 75702065 75702220 -64614545 + MER117 DNA MER1_type 1 195 -2 184 357 0 0 chr10 75702249 75702305 -64614460 + MIR SINE MIR 43 98 -110 383 323 90 19 chr10 75702356 75702581 -64614184 + MIR SINE MIR 3 241 -21 195 289 40 26 chr10 75703361 75703437 -64613328 - L2 LINE L2 0 3313 3237 1091 254 6 75 chr10 75703468 75703827 -64612938 + MER102b DNA MER1_type 7 340 -1 1273 163 102 1 chr10 75704815 75705080 -64611685 + MER1B DNA MER1_type 89 339 0 261 286 218 15 chr10 75705093 75705226 -64611539 + MIR SINE MIR 67 226 -36 2395 76 0 3 chr10 75705228 75705532 -64611233 + AluSg SINE Alu 1 303 -7 1085 208 38 4 chr10 75705656 75705892 -64610873 - MIR SINE MIR -4 258 15 421 265 80 33 chr10 75706210 75706361 -64610404 + MIR SINE MIR 2 159 -103 429 266 36 58 chr10 75706425 75706564 -64610201 + MIR SINE MIR 79 214 -48 613 75 0 0 chr10 75706612 75706692 -64610073 + MADE1 DNA Mariner 1 80 0 242 273 50 72 chr10 75707200 75707339 -64609426 + MIR SINE MIR 81 216 -46 228 318 26 40 chr10 75708266 75708417 -64608348 - MLT1K LTR MaLR -420 168 20 489 216 134 8 chr10 75709067 75709201 -64607564 + MER117 DNA MER1_type 4 154 -43 915 226 26 0 chr10 75709337 75709527 -64607238 + MER63A DNA MER1_type 3 197 -13 293 241 40 13 chr10 75709624 75709719 -64607046 + MIR SINE MIR 71 169 -39 481 352 56 9 chr10 75710093 75710309 -64606456 + MIR SINE MIR 25 250 -12 907 212 69 0 chr10 75710505 75710708 -64606057 - MER20 DNA MER1_type -2 217 1 1767 154 31 3 chr10 75711189 75711475 -64605290 + AluJb SINE Alu 1 294 -18 216 0 0 0 chr10 75711475 75711499 -64605266 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 526 286 42 36 chr10 75711548 75711716 -64605049 + MIR SINE MIR 88 256 -6 227 355 65 0 chr10 75711835 75711928 -64604837 + L2 LINE L2 3154 3252 -20 290 289 72 0 chr10 75711947 75712044 -64604721 + L2 LINE L2 3168 3271 -1 281 349 30 8 chr10 75712485 75712617 -64604148 + MIR SINE MIR 19 153 -55 468 245 252 0 chr10 75713285 75713424 -64603341 + MIR SINE MIR 64 237 -25 231 363 0 0 chr10 75717075 75717155 -64599610 - MER117 DNA MER1_type -117 80 1 254 330 22 11 chr10 75717155 75717246 -64599519 + L3b LINE CR1 1360 1451 -132 900 226 20 5 chr10 75717357 75717556 -64599209 + MIR SINE MIR 2 203 -59 1486 148 0 38 chr10 75717717 75717980 -64598785 - AluJo SINE Alu -30 282 30 21 57 0 0 chr10 75718019 75718054 -64598711 + AT_rich Low_complexity Low_complexity 1 35 0 373 223 79 29 chr10 75718673 75718812 -64597953 - L2 LINE L2 0 3313 3168 874 235 68 9 chr10 75719172 75719393 -64597372 - MIR SINE MIR 0 262 29 247 258 89 81 chr10 75719390 75719514 -64597251 - MIR3 SINE MIR -20 188 64 * 211 357 71 0 chr10 75720094 75720220 -64596545 - MIR SINE MIR 0 262 128 316 304 87 14 chr10 75721302 75721440 -64595325 - MIR SINE MIR -12 250 103 725 318 35 16 chr10 75723468 75723723 -64593042 - MIR SINE MIR 0 262 3 401 131 12 0 chr10 75725003 75725087 -64591678 + CT-rich Low_complexity Low_complexity 2 86 0 333 0 0 0 chr10 75725087 75725124 -64591641 + (CA)n Simple_repeat Simple_repeat 1 37 0 2169 98 7 0 chr10 75725861 75726156 -64590609 - AluSx SINE Alu -15 297 1 311 252 30 61 chr10 75726178 75726309 -64590456 - MIR SINE MIR -64 144 18 608 291 91 4 chr10 75726381 75726611 -64590154 - MIR SINE MIR -12 250 1 859 219 61 0 chr10 75726679 75726875 -64589890 - MIR SINE MIR -19 243 36 294 250 0 36 chr10 75727791 75727875 -64588890 + CT-rich Low_complexity Low_complexity 1 81 0 318 265 182 0 chr10 75728587 75728719 -64588046 - MIR3 SINE MIR -5 203 48 900 246 23 54 chr10 75729090 75729345 -64587420 - MIR SINE MIR -1 261 10 309 318 142 8 chr10 75729908 75730054 -64586711 - MIR SINE MIR -53 155 5 412 341 153 25 chr10 75730936 75731525 -64585240 - L2 LINE L2 -350 2964 2301 783 225 14 57 chr10 75731549 75731758 -64585007 - MER63A DNA MER1_type -2 208 9 689 319 110 53 chr10 75732159 75732800 -64583965 + L1MC/D LINE L1 1040 5831 -813 532 294 67 10 chr10 75733603 75733797 -64582968 - MIR SINE MIR -34 228 24 341 254 121 62 chr10 75735473 75735621 -64581144 - MIR SINE MIR -56 152 6 378 135 54 27 chr10 75736141 75736215 -64580550 + MER51B LTR ERV1 211 286 -91 204 97 0 0 chr10 75736215 75736246 -64580519 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 679 295 45 0 chr10 75736607 75736807 -64579958 - MIR SINE MIR -6 256 48 721 318 69 50 chr10 75736899 75737362 -64579403 - L2 LINE L2 -1 3312 2841 473 273 0 0 chr10 75737678 75737788 -64578977 - MIR SINE MIR -110 152 43 433 269 137 14 chr10 75738560 75738772 -64577993 - Charlie8 DNA MER1_type -2179 238 1 1634 197 0 3 chr10 75738938 75739238 -64577527 + AluJb SINE Alu 1 299 -13 206 297 30 40 chr10 75739544 75739645 -64577120 + MIR3 SINE MIR 10 109 -99 2213 89 0 13 chr10 75845029 75845333 -64471432 + AluY SINE Alu 1 300 -11 582 227 89 63 chr10 75845352 75845735 -64471030 + L1MB5 LINE L1 3173 3565 -2581 427 225 27 0 chr10 75845750 75845861 -64470904 + L1MB5 LINE L1 4744 4857 -1289 559 225 51 83 chr10 75845880 75846163 -64470602 + L1MB5 LINE L1 4965 5235 -911 192 77 0 0 chr10 75846163 75846189 -64470576 + (TG)n Simple_repeat Simple_repeat 2 27 0 559 225 51 83 chr10 75846189 75846279 -64470486 + L1MB5 LINE L1 5235 5326 -820 778 133 27 27 chr10 75846297 75846447 -64470318 + L1MB8 LINE L1 5677 5826 -352 * 1983 327 98 16 chr10 75846443 75847216 -64469549 + L1MB5 LINE L1 5336 6172 -2 378 284 59 41 chr10 75847273 75847442 -64469323 + L1MC/D LINE L1 6034 6205 -2101 2189 118 16 0 chr10 75847525 75847830 -64468935 - AluSx SINE Alu -2 310 1 34 0 0 0 chr10 75848125 75848159 -64468606 + AT_rich Low_complexity Low_complexity 1 34 0 210 91 0 0 chr10 75848246 75848279 -64468486 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1878 113 68 4 chr10 75848281 75848546 -64468219 - AluSx SINE Alu -30 282 1 208 180 60 0 chr10 75848745 75848795 -64467970 - MIR SINE MIR -62 200 148 211 315 0 0 chr10 75848908 75848962 -64467803 + L3 LINE CR1 1506 1559 -18 2387 44 0 31 chr10 75849178 75849498 -64467267 - AluY SINE Alu -1 310 1 449 306 68 7 chr10 75849999 75850146 -64466619 + MIR3 SINE MIR 30 185 -23 1668 183 31 0 chr10 75850777 75851066 -64465699 - AluJb SINE Alu -9 303 6 520 235 13 13 chr10 75851104 75851253 -64465512 + AluSc SINE Alu 1 149 -160 2097 109 0 7 chr10 75851991 75852276 -64464489 + AluSg SINE Alu 28 310 0 2423 69 7 10 chr10 75852301 75852605 -64464160 + AluY SINE Alu 1 303 -8 1187 124 148 5 chr10 75852773 75852983 -64463782 - AluSg1 SINE Alu -14 295 56 1986 89 3 34 chr10 75852983 75853275 -64463490 - AluSp SINE Alu -9 304 22 934 180 0 22 chr10 75853368 75853610 -64463155 + AluJo SINE Alu 41 306 -6 297 0 0 0 chr10 75853899 75853932 -64462833 + (CA)n Simple_repeat Simple_repeat 2 34 0 231 130 0 22 chr10 75853932 75853978 -64462787 + (GA)n Simple_repeat Simple_repeat 1 45 0 994 230 92 14 chr10 75854354 75854843 -64461922 + L1ME4a LINE L1 5490 6049 -72 30 27 0 0 chr10 75854875 75854912 -64461853 + AT_rich Low_complexity Low_complexity 1 37 0 2414 42 3 7 chr10 75854920 75855207 -64461558 - AluY SINE Alu -7 304 19 3053 178 37 14 chr10 75855330 75855983 -64460782 - L1MB7 LINE L1 -38 6146 5479 2790 240 27 41 chr10 75855973 75856703 -64460062 - L1M4 LINE L1 -5729 813 95 * 2211 121 0 0 chr10 75856703 75857000 -64459765 - AluSg SINE Alu -13 297 1 2790 240 27 41 chr10 75857000 75857094 -64459671 - L1M4 LINE L1 -6447 95 1 28 0 0 0 chr10 75857111 75857139 -64459626 + AT_rich Low_complexity Low_complexity 1 28 0 730 128 73 0 chr10 75857164 75857273 -64459492 - FLAM_C SINE Alu -16 117 1 1145 317 53 85 chr10 75857313 75857954 -64458811 - L1MD2 LINE L1 -15 6344 5684 2342 113 0 0 chr10 75857954 75858264 -64458501 - AluSg SINE Alu 0 310 1 1510 198 20 27 chr10 75858266 75858564 -64458201 - AluJo SINE Alu -16 296 1 1145 317 53 85 chr10 75858564 75858663 -64458102 - L1MD2 LINE L1 -676 5683 5628 371 250 89 48 chr10 75858678 75858926 -64457839 - L1M4 LINE L1 -3561 2585 2328 322 188 26 128 chr10 75858947 75858988 -64457777 - L1M4 LINE L1 -3805 2341 2297 1343 51 28 0 chr10 75858988 75859164 -64457601 - L1PA4 LINE L1 0 6155 5975 322 188 26 128 chr10 75859164 75859239 -64457526 - L1M4 LINE L1 -3849 2297 2237 1497 186 56 0 chr10 75859242 75859527 -64457238 + AluJo SINE Alu 2 302 -10 248 363 20 20 chr10 75859878 75859980 -64456785 - L2 LINE L2 -219 3053 2952 345 195 242 8 chr10 75860083 75860211 -64456554 + HsTC2 DNA Tc2 23 1898 0 1070 172 0 17 chr10 75861230 75861404 -64455361 - AluJb SINE Alu -21 291 121 879 148 0 40 chr10 75861407 75861469 -64455296 - FLAM_C SINE Alu 0 184 121 1579 167 4 0 chr10 75861469 75861715 -64455050 - AluJo SINE Alu -65 247 1 879 148 0 40 chr10 75861715 75861842 -64454923 - FLAM_C SINE Alu -63 121 1 194 79 0 53 chr10 75862208 75862246 -64454519 + (TTTTTA)n Simple_repeat Simple_repeat 3 38 0 313 167 0 0 chr10 75862687 75862735 -64454030 - Alu SINE Alu -254 48 1 23 68 0 0 chr10 75864422 75864466 -64452299 + AT_rich Low_complexity Low_complexity 1 44 0 25 90 0 0 chr10 75864676 75864743 -64452022 + AT_rich Low_complexity Low_complexity 1 67 0 2323 104 0 0 chr10 75865162 75865470 -64451295 - AluSc SINE Alu -1 308 1 210 281 78 0 chr10 75865973 75866037 -64450728 - MIR SINE MIR -10 252 184 1823 92 0 32 chr10 75866177 75866427 -64450338 + AluSq SINE Alu 1 242 -71 279 105 0 0 chr10 75866428 75866466 -64450299 - Alu SINE Alu -261 40 3 226 218 0 36 chr10 75866433 75866488 -64450277 - AluJo SINE Alu -132 170 118 * 305 295 154 13 chr10 75869521 75869677 -64447088 - L1MC4a LINE L1 -1628 6180 6003 22 0 0 0 chr10 75870360 75870382 -64446383 + AT_rich Low_complexity Low_complexity 1 22 0 223 254 85 0 chr10 75870910 75870969 -64445796 - MIR SINE MIR -67 141 78 1494 116 0 62 chr10 75875915 75876090 -64440675 - AluSg/x SINE Alu -5 307 123 252 0 0 0 chr10 75876090 75876118 -64440647 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2098 94 4 0 chr10 75876118 75876395 -64440370 - AluSg1 SINE Alu -31 278 1 1494 116 0 62 chr10 75876395 75876459 -64440306 - AluSg/x SINE Alu -187 125 82 1915 130 22 4 chr10 75876512 75876817 -64439948 - AluSx SINE Alu 0 310 1 2428 86 3 3 chr10 75876829 75877142 -64439623 - AluSp SINE Alu 0 313 1 1501 198 61 4 chr10 75877145 75877423 -64439342 - AluJo SINE Alu -18 294 1 2107 115 3 3 chr10 75878078 75878397 -64438368 - AluSq SINE Alu 0 319 1 222 62 0 0 chr10 75879530 75879562 -64437203 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1548 52 0 5 chr10 75879564 75879758 -64437007 - AluY SINE Alu 0 311 119 492 211 0 0 chr10 75879776 75879923 -64436842 + C-rich Low_complexity Low_complexity 1 147 0 326 280 23 40 chr10 75879936 75880111 -64436654 + (CACCC)n Simple_repeat Simple_repeat 3 174 0 241 262 151 29 chr10 75881032 75881193 -64435572 - MIR SINE MIR -46 216 38 850 140 14 14 chr10 75881698 75881841 -64434924 - FRAM SINE Alu -5 171 29 1061 129 24 24 chr10 75881878 75882048 -64434717 + AluSg/x SINE Alu 132 301 -11 2456 64 0 19 chr10 75882073 75882384 -64434381 - AluY SINE Alu -6 305 1 1817 154 25 11 chr10 75882472 75882758 -64434007 - AluJo SINE Alu -21 291 2 339 218 58 46 chr10 75882855 75882942 -64433823 + MIR3 SINE MIR 73 160 -48 2449 93 0 0 chr10 75882943 75883255 -64433510 - AluSx SINE Alu 0 312 1 1024 144 8 176 chr10 75883330 75883683 -64433082 + AluJb SINE Alu 5 298 -4 1887 111 6 86 chr10 75883925 75884249 -64432516 + AluSx SINE Alu 1 298 -14 316 326 48 41 chr10 75884844 75884991 -64431774 - MIR SINE MIR -61 147 9 235 255 35 0 chr10 75886444 75886512 -64430253 + CT-rich Low_complexity Low_complexity 1 70 0 2017 160 0 0 chr10 75887021 75887328 -64429437 - AluJo SINE Alu 0 312 6 1977 122 16 38 chr10 75887730 75888049 -64428716 + AluSx SINE Alu 1 312 0 1866 97 3 35 chr10 75888116 75888446 -64428319 - AluSc SINE Alu 0 321 1 538 271 16 32 chr10 75888934 75889122 -64427643 + MER5A DNA MER1_type 1 185 -4 2233 118 0 0 chr10 75889254 75889558 -64427207 + AluSx SINE Alu 1 304 -8 682 252 41 28 chr10 75889565 75889741 -64427024 + MIR SINE MIR 29 210 -52 1415 176 18 76 chr10 75889741 75890070 -64426695 + AluJb SINE Alu 1 310 -2 682 252 41 28 chr10 75890070 75890111 -64426654 + MIR SINE MIR 210 249 -13 1693 164 6 56 chr10 75890878 75891201 -64425564 + AluJo SINE Alu 1 307 -5 443 262 86 5 chr10 75891218 75891405 -64425360 + L1ME LINE L1 5490 5691 -430 1617 164 22 4 chr10 75891548 75891817 -64424948 + AluJb SINE Alu 1 274 -38 346 265 7 7 chr10 75892288 75892424 -64424341 + MER113 DNA MER1_type? 3 138 -383 948 146 62 0 chr10 75892455 75892625 -64424140 + AluSg/x SINE Alu 135 310 0 239 271 0 14 chr10 75892719 75892789 -64423976 + MER113 DNA MER1_type? 453 521 0 210 204 143 0 chr10 75893298 75893347 -64423418 + L2 LINE L2 3256 3311 -2 560 295 122 36 chr10 75893995 75894106 -64422659 + L2 LINE L2 2684 2784 -529 783 212 106 45 chr10 75894106 75894304 -64422461 + MER63A DNA MER1_type 1 210 0 560 295 122 36 chr10 75894304 75894573 -64422192 + L2 LINE L2 2784 3111 -202 657 118 0 0 chr10 75894688 75894781 -64421984 + AluSg/x SINE Alu 208 300 -12 444 128 85 0 chr10 75894932 75895026 -64421739 - L1MA7 LINE L1 -10 6281 6180 359 143 148 11 chr10 75895027 75895140 -64421625 - MER106B DNA MER1_type -84 975 29 199 336 127 60 chr10 75895147 75895197 -64421568 - L2 LINE L2 -1393 1921 1876 2315 79 7 3 chr10 75895197 75895488 -64421277 + AluSg SINE Alu 1 292 -18 199 336 127 60 chr10 75895488 75895869 -64420896 - L2 LINE L2 -1438 1876 1461 1828 151 0 40 chr10 75896032 75896331 -64420434 - AluJo SINE Alu -21 291 5 2315 97 0 7 chr10 75896352 75896651 -64420114 - AluSc SINE Alu -12 297 1 2439 93 0 0 chr10 75896756 75897066 -64419699 - AluSg SINE Alu 0 310 1 214 281 42 42 chr10 75897410 75897506 -64419259 + L2 LINE L2 1898 1993 -1321 24 0 0 0 chr10 75900095 75900119 -64416646 + AT_rich Low_complexity Low_complexity 1 24 0 1024 179 113 10 chr10 75900706 75900901 -64415864 + MER20 DNA MER1_type 2 216 -3 392 288 36 0 chr10 75901052 75901163 -64415602 - MIR SINE MIR -20 242 128 2132 122 0 0 chr10 75901760 75902047 -64414718 - AluSx SINE Alu -25 287 1 1168 159 5 29 chr10 75902680 75902887 -64413878 + AluJo SINE Alu 1 202 -110 324 170 0 10 chr10 75902887 75902958 -64413807 - Alu SINE Alu -252 47 1 2282 81 7 16 chr10 75902999 75903309 -64413456 - AluY SINE Alu -3 308 2 231 100 100 0 chr10 75903309 75903349 -64413416 - L3 LINE CR1 -565 1012 969 346 158 26 2 chr10 75903826 75904063 -64412702 + AluJo SINE Alu 12 299 -3 642 242 78 9 chr10 75904133 75904318 -64412447 + MIR SINE MIR 1 182 -63 344 261 143 48 chr10 75904737 75905075 -64411690 + L1MEd LINE L1 709 1108 -5011 1942 107 14 48 chr10 75905075 75905365 -64411400 + AluSp SINE Alu 1 280 -33 344 261 143 48 chr10 75905365 75905508 -64411257 + L1MEd LINE L1 1108 1236 -4883 955 253 90 13 chr10 75905859 75906171 -64410594 + MER46C DNA MER2_type 2 337 -1 2299 102 0 0 chr10 75907076 75907371 -64409394 - AluSx SINE Alu -17 295 1 2759 166 22 4 chr10 75907603 75908055 -64408710 + MER66B LTR ERV1 27 486 0 339 25 0 0 chr10 75908169 75908209 -64408556 + (TG)n Simple_repeat Simple_repeat 2 41 0 2048 123 0 27 chr10 75908687 75908987 -64407778 - AluY SINE Alu -19 292 1 24 0 0 0 chr10 75908987 75909011 -64407754 + AT_rich Low_complexity Low_complexity 1 24 0 824 116 7 103 chr10 75909011 75909157 -64407608 - FLAM_C SINE Alu 0 133 2 1670 155 40 43 chr10 75909179 75909482 -64407283 - AluJb SINE Alu -10 302 1 2272 94 7 0 chr10 75909499 75909797 -64406968 - AluSq SINE Alu -13 300 1 378 0 0 0 chr10 75910000 75910042 -64406723 + (TG)n Simple_repeat Simple_repeat 1 42 0 1876 129 24 17 chr10 75910042 75910321 -64406444 - AluSx SINE Alu -28 284 1 2297 91 7 0 chr10 75910446 75910744 -64406021 - AluY SINE Alu -11 300 1 2290 105 0 0 chr10 75911732 75912027 -64404738 + AluSx SINE Alu 1 295 -17 296 314 32 76 chr10 75912726 75912911 -64403854 - MIR3 SINE MIR -14 194 18 32 0 0 0 chr10 75912945 75912977 -64403788 + AT_rich Low_complexity Low_complexity 1 32 0 1860 132 44 10 chr10 75913422 75913718 -64403047 - AluSx SINE Alu -6 306 1 1299 203 4 0 chr10 75913811 75914053 -64402712 - AluJb SINE Alu -24 288 46 1094 107 0 0 chr10 75914053 75914193 -64402572 + AluSg/x SINE Alu 171 310 -2 430 149 97 35 chr10 75914521 75914635 -64402130 - MER112 DNA MER1_type -101 159 39 944 127 0 0 chr10 75914667 75914785 -64401980 - FLAM_C SINE Alu -15 118 1 1345 278 115 16 chr10 75914816 75915251 -64401514 - MLT1H1 LTR MaLR -30 525 48 403 317 97 5 chr10 75915530 75915716 -64401049 + L2 LINE L2 3111 3313 0 1792 65 4 43 chr10 75915736 75916012 -64400753 + AluY SINE Alu 1 265 -46 222 279 140 73 chr10 75916694 75916817 -64399948 - MIR SINE MIR -27 235 95 2232 109 0 34 chr10 75916817 75917138 -64399627 + AluSx SINE Alu 1 310 -2 222 279 140 73 chr10 75917138 75917193 -64399572 - MIR SINE MIR -167 95 45 323 254 218 7 chr10 75917227 75917369 -64399396 + MER5A DNA MER1_type 18 189 0 488 127 25 0 chr10 75917829 75917908 -64398857 - Charlie5 DNA MER1_type 0 2624 2544 1784 116 91 11 chr10 75917911 75918186 -64398579 + AluSx SINE Alu 1 297 -15 804 104 45 0 chr10 75918186 75918320 -64398445 - Charlie5 DNA MER1_type -2423 189 50 858 140 0 28 chr10 75918444 75918587 -64398178 + FLAM_C SINE Alu 5 143 0 222 297 78 23 chr10 75918855 75919017 -64397748 + MER5B DNA MER1_type 1 186 -3 23 33 0 0 chr10 75919984 75920014 -64396751 + GC_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr10 75920720 75920743 -64396022 + (TA)n Simple_repeat Simple_repeat 1 23 0 2267 84 3 3 chr10 75920743 75921030 -64395735 - AluSq SINE Alu -18 295 9 342 299 137 8 chr10 75921611 75921728 -64395037 - MIR3 SINE MIR -39 169 38 3896 142 35 22 chr10 75922091 75922718 -64394047 + MER41B LTR ERV1 1 635 0 193 194 45 75 chr10 75922720 75922787 -64393978 - MIR SINE MIR -70 192 128 1512 105 5 9 chr10 75922991 75923254 -64393511 - AluSg SINE Alu 0 310 80 2568 50 3 0 chr10 75923254 75923554 -64393211 - AluY SINE Alu -9 302 1 678 109 0 0 chr10 75923554 75923646 -64393119 - AluSg SINE Alu -217 93 2 328 300 115 8 chr10 75923864 75923994 -64392771 - MIR3 SINE MIR -46 162 19 260 365 118 12 chr10 75924374 75924544 -64392221 - MIR3 SINE MIR -15 193 6 1950 129 21 0 chr10 75925145 75925459 -64391306 - AluSq SINE Alu 0 320 1 1315 154 20 125 chr10 75925705 75926048 -64390717 - AluJb SINE Alu -5 307 1 1260 162 0 14 chr10 75926087 75926297 -64390468 + AluJb SINE Alu 2 208 -104 2084 119 10 0 chr10 75926312 75926605 -64390160 - AluSp SINE Alu -17 296 1 2239 85 0 3 chr10 75926705 75927014 -64389751 - AluSx SINE Alu 0 309 2 575 133 6 218 chr10 75927055 75927132 -64389633 - MER94 DNA DNA -1 133 108 1534 151 26 74 chr10 75927132 75927299 -64389466 - AluJo SINE Alu -16 296 149 387 0 0 0 chr10 75927299 75927342 -64389423 + (TG)n Simple_repeat Simple_repeat 2 44 0 1534 151 26 74 chr10 75927342 75927485 -64389280 - AluJo SINE Alu -163 149 1 575 133 6 218 chr10 75927485 75927572 -64389193 - MER94 DNA DNA -26 108 4 346 302 8 23 chr10 75927774 75927903 -64388862 + MIR SINE MIR 74 200 -62 374 259 155 31 chr10 75928039 75928232 -64388533 - L2 LINE L2 -1538 1776 1560 21 36 0 0 chr10 75929360 75929388 -64387377 + AT_rich Low_complexity Low_complexity 1 28 0 2139 122 0 10 chr10 75930719 75931044 -64385721 + AluSx SINE Alu 3 312 0 1886 172 62 3 chr10 75931336 75931661 -64385104 + MER2 DNA MER2_type 1 344 0 1986 199 70 51 chr10 75932187 75932408 -64384357 + L1ME3A LINE L1 3760 3975 -2171 1989 148 0 13 chr10 75932408 75932719 -64384046 + AluJo SINE Alu 1 307 -5 1986 199 70 51 chr10 75932719 75933069 -64383696 + L1ME3A LINE L1 3975 4342 -1804 1187 158 109 115 chr10 75933091 75933395 -64383370 + AluJo SINE Alu 1 302 0 2230 71 30 27 chr10 75933395 75933692 -64383073 + AluSc SINE Alu 1 298 -11 380 186 47 0 chr10 75933703 75933789 -64382976 + L1ME3A LINE L1 4616 4705 -1441 22 35 0 0 chr10 75934346 75934375 -64382390 + AT_rich Low_complexity Low_complexity 1 29 0 2271 191 119 16 chr10 75934375 75934925 -64381840 + L1ME3A LINE L1 4693 5314 -832 1651 164 80 3 chr10 75934925 75935211 -64381554 + AluJo SINE Alu 1 308 -4 2271 191 119 16 chr10 75935211 75935271 -64381494 + L1ME3A LINE L1 5314 5366 -780 1000 218 101 54 chr10 75935267 75935461 -64381304 + L1ME3A LINE L1 5834 6050 -120 * 2210 113 0 31 chr10 75935461 75935780 -64380985 - AluSg SINE Alu -1 309 1 1000 218 101 54 chr10 75935780 75935902 -64380863 + L1ME3A LINE L1 6050 6165 -5 1421 101 0 0 chr10 75936828 75937007 -64379758 + AluSx SINE Alu 1 179 -133 1407 119 111 8 chr10 75937017 75937252 -64379513 - AluSx SINE Alu -19 293 35 683 290 113 9 chr10 75937319 75937540 -64379225 - MIR SINE MIR 0 262 19 1010 148 31 99 chr10 75937581 75937729 -64379036 + MER3 DNA MER1_type 1 157 -52 2425 65 0 0 chr10 75937729 75938019 -64378746 - AluY SINE Alu -21 290 1 1715 175 13 26 chr10 75938019 75938327 -64378438 - AluJb SINE Alu -7 305 1 1010 148 31 99 chr10 75938327 75938400 -64378365 + MER3 DNA MER1_type 155 208 -1 2390 84 0 3 chr10 75938424 75938720 -64378045 - AluSg SINE Alu -15 295 1 22 0 0 0 chr10 75939332 75939354 -64377411 + AT_rich Low_complexity Low_complexity 1 22 0 205 363 65 8 chr10 75939718 75939842 -64376923 - L2 LINE L2 -4 3309 3179 250 332 118 46 chr10 75939972 75940345 -64376420 - L2 LINE L2 -450 2864 2465 2347 96 0 0 chr10 75940761 75941053 -64375712 + AluSc SINE Alu 1 292 -17 451 330 81 71 chr10 75941158 75941237 -64375528 - MLT1K LTR MaLR -16 572 495 742 83 28 0 chr10 75941237 75941345 -64375420 + L1PA13 LINE L1 6053 6163 0 451 330 81 71 chr10 75941345 75941674 -64375091 - MLT1K LTR MaLR -93 495 160 207 269 30 15 chr10 75941849 75941916 -64374849 - MIR SINE MIR -83 125 58 2196 120 7 3 chr10 75941918 75942227 -64374538 + AluSx SINE Alu 1 310 -2 257 171 219 73 chr10 75942430 75942553 -64374212 + L1ME1 LINE L1 5989 6129 -37 23 0 0 0 chr10 75943310 75943333 -64373432 + AT_rich Low_complexity Low_complexity 1 23 0 4158 140 22 61 chr10 75943706 75944175 -64372590 - L1PA16 LINE L1 -27 6139 5653 2204 115 0 3 chr10 75944175 75944479 -64372286 - AluSc SINE Alu -6 303 1 4158 140 22 61 chr10 75944479 75944703 -64372062 - L1PA16 LINE L1 -513 5653 5470 2367 99 0 0 chr10 75944703 75945005 -64371760 + AluSq SINE Alu 1 302 -11 4158 140 22 61 chr10 75945005 75945112 -64371653 - L1PA16 LINE L1 -696 5470 5360 236 264 0 0 chr10 75945667 75945720 -64371045 + 5S rRNA rRNA 2 54 -67 1412 126 94 105 chr10 75945883 75946146 -64370619 + MER44D DNA MER2_type 1 266 -2225 522 99 0 0 chr10 75946146 75946237 -64370528 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 1412 126 94 105 chr10 75946237 75946315 -64370450 + MER44D DNA MER2_type 266 608 -1 4708 167 40 44 chr10 75946421 75947855 -64368910 - L1MB7 LINE L1 -19 6165 4726 1666 174 6 56 chr10 75947855 75948176 -64368589 - AluJo SINE Alu -7 305 1 4708 167 40 44 chr10 75948176 75948259 -64368506 - L1MB7 LINE L1 -1458 4726 4644 198 0 0 0 chr10 75948259 75948281 -64368484 + (TTA)n Simple_repeat Simple_repeat 1 22 0 4708 167 40 44 chr10 75948281 75948453 -64368312 - L1MB7 LINE L1 -1540 4644 4492 1248 141 25 76 chr10 75948453 75948729 -64368036 - AluSg SINE Alu -7 303 42 10575 24 1 0 chr10 75948884 75950839 -64365926 + L1PA3 LINE L1 4183 6152 -3 2663 126 67 17 chr10 75950860 75951266 -64365499 - MSTC LTR MaLR -2 426 1 300 250 22 110 chr10 75951341 75951477 -64365288 - Charlie2 DNA MER1_type -2632 150 27 285 329 13 0 chr10 75951524 75951600 -64365165 - MIR SINE MIR -61 147 71 1905 122 41 0 chr10 75951624 75951929 -64364836 + AluSx SINE Alu 1 316 0 1979 134 23 7 chr10 75952898 75953197 -64363568 - AluSx SINE Alu -8 304 1 183 100 0 0 chr10 75954273 75954303 -64362462 + (TG)n Simple_repeat Simple_repeat 1 30 0 1613 170 18 4 chr10 75954774 75955050 -64361715 + AluJo SINE Alu 1 280 -32 2191 8 0 8 chr10 75955108 75955349 -64361416 - AluYb8 SINE Alu -6 312 74 2198 99 7 10 chr10 75955428 75955730 -64361035 - AluSq SINE Alu -12 301 1 21 0 0 0 chr10 75955800 75955821 -64360944 + AT_rich Low_complexity Low_complexity 1 21 0 245 283 0 17 chr10 75956037 75956097 -64360668 - L2 LINE L2 -1 3271 3213 2278 104 0 3 chr10 75956435 75956733 -64360032 - AluSx SINE Alu -15 297 1 199 186 134 82 chr10 75956734 75956831 -64359934 + MIR SINE MIR 107 208 -54 420 282 17 0 chr10 75956881 75956998 -64359767 + MIR SINE MIR 67 185 -77 1965 124 50 0 chr10 75959138 75959420 -64357345 - AluSx SINE Alu -16 296 1 289 105 0 0 chr10 75959433 75959471 -64357294 - Alu SINE Alu -264 38 1 2198 86 3 14 chr10 75959478 75959768 -64356997 - AluSq SINE Alu -8 305 19 439 260 71 16 chr10 75961827 75961954 -64354811 - MIR3 SINE MIR -34 174 41 2407 100 0 0 chr10 75962034 75962344 -64354421 - AluSx SINE Alu -2 310 1 221 143 61 0 chr10 75967487 75967536 -64349229 + CT-rich Low_complexity Low_complexity 1 52 0 381 43 0 0 chr10 75967970 75968017 -64348748 + (TG)n Simple_repeat Simple_repeat 2 48 0 228 206 350 0 chr10 75968238 75968335 -64348430 - L2 LINE L2 -18 3295 3165 345 291 82 25 chr10 75968622 75968649 -64348116 - MIR3 SINE MIR -5 203 179 1095 154 106 140 chr10 75968649 75968993 -64347772 + AluJo SINE Alu 1 334 0 345 291 82 25 chr10 75968993 75969122 -64347643 - MIR3 SINE MIR -29 179 37 959 110 0 15 chr10 75970137 75970306 -64346459 + AluSp/q SINE Alu 170 313 0 650 242 240 53 chr10 75970724 75970935 -64345830 - L2 LINE L2 -4 3309 3139 1647 162 10 24 chr10 75970935 75971231 -64345534 + AluJb SINE Alu 1 292 -20 650 242 240 53 chr10 75971231 75971378 -64345387 - L2 LINE L2 -174 3139 2884 180 0 0 0 chr10 75973581 75973601 -64343164 + (A)n Simple_repeat Simple_repeat 1 20 0 2280 89 0 0 chr10 75974106 75974387 -64342378 - AluSx SINE Alu -31 281 1 552 278 79 75 chr10 75978283 75978524 -64338241 - MIR SINE MIR -6 256 15 185 214 45 101 chr10 75978525 75978546 -64338219 + MIR3 SINE MIR 104 125 -83 2350 93 7 0 chr10 75978546 75978847 -64337918 - AluSp SINE Alu -10 303 1 185 214 45 101 chr10 75978847 75978914 -64337851 + MIR3 SINE MIR 125 187 -21 313 250 16 0 chr10 75980057 75980121 -64336644 - MER2 DNA MER2_type -1 344 280 940 67 8 67 chr10 75980134 75980268 -64336497 + AluSq/x SINE Alu 1 126 -187 2235 95 54 0 chr10 75980275 75980569 -64336196 + AluSg SINE Alu 1 310 0 951 171 125 0 chr10 75980609 75980785 -64335980 - MER2 DNA MER2_type -138 207 10 2097 97 0 50 chr10 75980930 75981272 -64335493 + AluSq SINE Alu 1 327 0 2005 101 18 0 chr10 75981387 75981664 -64335101 + AluSp SINE Alu 1 282 -31 2168 125 3 10 chr10 75982338 75982651 -64334114 - AluSx SINE Alu -1 311 1 264 252 46 73 chr10 75982696 75982847 -64333918 - L1MC4 LINE L1 -59 7983 7837 598 198 45 19 chr10 75982894 75983051 -64333714 - L1ME2 LINE L1 -213 5951 5791 22 0 0 0 chr10 75983203 75983225 -64333540 + AT_rich Low_complexity Low_complexity 1 22 0 1636 205 0 7 chr10 75983669 75983803 -64332962 + AluJo SINE Alu 1 134 -178 2407 87 3 0 chr10 75983803 75984102 -64332663 + AluSx SINE Alu 1 300 -12 1636 205 0 7 chr10 75984102 75984270 -64332495 + AluJo SINE Alu 134 301 -11 354 118 0 0 chr10 75984789 75984840 -64331925 + L1MA10 LINE L1 6284 6334 0 2485 62 3 0 chr10 75985633 75985937 -64330828 - AluY SINE Alu -6 305 1 1701 137 4 19 chr10 75986008 75986278 -64330487 + AluJo SINE Alu 14 279 -33 291 298 11 21 chr10 75986522 75986616 -64330149 - MIR SINE MIR -98 110 18 559 165 0 0 chr10 75986647 75986726 -64330039 - AluJ/FRAM SINE Alu -16 296 218 780 186 8 0 chr10 75986726 75986850 -64329915 - AluJo/FLAM SINE Alu -177 125 1 2436 81 3 0 chr10 75986856 75987153 -64329612 - AluSx SINE Alu -14 298 1 1984 153 7 0 chr10 75987636 75987937 -64328828 - AluJb SINE Alu -9 303 1 207 209 0 0 chr10 75988108 75988151 -64328614 + T-rich Low_complexity Low_complexity 1 43 0 1898 161 0 10 chr10 75988408 75988707 -64328058 + AluJb SINE Alu 1 296 -16 2122 110 3 3 chr10 75988806 75989096 -64327669 - AluY SINE Alu -21 290 1 367 208 208 0 chr10 75989309 75989405 -64327360 - MLT2E LTR ERVL -1 627 512 638 328 10 15 chr10 75989588 75989783 -64326982 - MLT2E LTR ERVL -392 236 43 422 215 65 0 chr10 75990450 75990543 -64326222 - MIR SINE MIR -39 223 125 1388 194 114 0 chr10 75991503 75991776 -64324989 - AluSx SINE Alu -8 304 1 1554 191 86 21 chr10 75991898 75992270 -64324495 + MSTD LTR MaLR 1 396 0 183 256 0 0 chr10 75992325 75992364 -64324401 + L2 LINE L2 3180 3218 -95 4616 128 14 70 chr10 75992829 75993643 -64323122 - Tigger1 DNA MER2_type 0 2418 1651 602 165 110 12 chr10 75993791 75993955 -64322810 - L1M4 LINE L1 -1648 4498 4319 2180 120 16 7 chr10 75994298 75994606 -64322159 + AluSx SINE Alu 1 311 -1 201 158 0 0 chr10 75994608 75994646 -64322119 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 368 207 28 123 chr10 75994875 75994930 -64321835 + L1M4 LINE L1 3794 3853 -2293 2228 128 0 0 chr10 75994930 75995236 -64321529 + AluSx SINE Alu 1 306 -6 368 207 28 123 chr10 75995236 75995359 -64321406 + L1M4 LINE L1 3853 3955 -2191 339 193 148 0 chr10 75995441 75995529 -64321236 + L1MA10 LINE L1 6225 6325 -9 2721 155 22 7 chr10 75995710 75996162 -64320603 - MER65C LTR ERV1 -2 459 1 7359 173 143 26 chr10 75996372 75997943 -64318822 - MER52A LTR ERV1 0 1755 1 2350 107 0 0 chr10 75998263 75998572 -64318193 - AluSx SINE Alu -2 310 2 1154 181 25 128 chr10 75998589 75998948 -64317817 + MLT1A1 LTR MaLR 1 322 -43 302 146 18 18 chr10 75998999 75999054 -64317711 + MLT1A1 LTR MaLR 342 396 0 540 116 32 84 chr10 75999154 75999249 -64317516 - FRAM SINE Alu -16 160 71 2374 87 6 3 chr10 75999584 75999895 -64316870 + AluSx SINE Alu 1 312 0 747 166 221 14 chr10 76000047 76000192 -64316573 + FAM SINE Alu 1 175 0 21 36 0 0 chr10 76000255 76000283 -64316482 + AT_rich Low_complexity Low_complexity 1 28 0 2232 116 7 0 chr10 76000428 76000722 -64316043 - AluSx SINE Alu -16 296 1 802 223 78 5 chr10 76001153 76001346 -64315419 + MER3 DNA MER1_type 3 209 0 264 401 54 18 chr10 76001850 76002017 -64314748 - L2 LINE L2 -10 3262 3090 224 139 360 35 chr10 76002034 76002120 -64314645 + MIR SINE MIR 79 192 -70 367 321 175 27 chr10 76002199 76002645 -64314120 - L2 LINE L2 -556 2758 2247 1244 160 96 53 chr10 76002649 76002930 -64313835 - AluJb SINE Alu -19 293 1 266 373 9 9 chr10 76004450 76004560 -64312205 - MIR3 SINE MIR -93 115 6 1925 106 0 53 chr10 76004875 76005159 -64311606 - AluSx SINE Alu -43 269 1 2265 62 45 14 chr10 76005200 76005490 -64311275 - AluY SINE Alu -12 299 1 527 237 91 16 chr10 76005490 76005676 -64311089 - Charlie2 DNA MER1_type -174 2688 2489 291 161 0 115 chr10 76005713 76005800 -64310965 - Charlie2 DNA MER1_type -354 2508 2432 35 0 0 0 chr10 76005870 76005905 -64310860 + AT_rich Low_complexity Low_complexity 1 35 0 2048 157 0 0 chr10 76005977 76006283 -64310482 + AluSx SINE Alu 1 306 -6 35040 39 2 2 chr10 76006415 76010606 -64306159 + L1P LINE L1 3 4196 -1950 2188 115 6 16 chr10 76060819 76061133 -64255632 - AluSp SINE Alu -2 311 1 512 268 113 19 chr10 76061170 76061435 -64255330 - MER20B DNA MER1_type -4 779 490 372 248 163 45 chr10 76062143 76062345 -64254420 + MIR SINE MIR 25 250 -12 305 268 85 46 chr10 76062366 76062519 -64254246 - MIR SINE MIR -57 205 47 192 300 33 0 chr10 76062838 76062898 -64253867 + MIR SINE MIR 90 151 -111 321 294 48 24 chr10 76063480 76063606 -64253159 + MIR SINE MIR 20 148 -114 21 0 0 0 chr10 76064482 76064503 -64252262 + AT_rich Low_complexity Low_complexity 1 21 0 191 161 0 0 chr10 76064788 76064819 -64251946 + MIR SINE MIR 220 250 -12 2385 77 0 7 chr10 76065169 76065467 -64251298 - AluSq SINE Alu -17 296 1 234 0 0 0 chr10 76065538 76065564 -64251201 + (A)n Simple_repeat Simple_repeat 1 26 0 1515 209 0 10 chr10 76066345 76066642 -64250123 - AluJb SINE Alu -18 294 1 670 192 15 0 chr10 76066819 76066949 -64249816 + Cheshire DNA MER1_type 1047 1178 -1242 2054 121 0 23 chr10 76066949 76067255 -64249510 + AluSx SINE Alu 1 299 -13 202 143 24 0 chr10 76067255 76067297 -64249468 + (TA)n Simple_repeat Simple_repeat 2 44 0 3902 171 53 103 chr10 76067363 76067791 -64248974 + Cheshire DNA MER1_type 1168 1616 -804 818 173 0 0 chr10 76067791 76067918 -64248847 - FLAM_C SINE Alu -2 131 5 3902 171 53 103 chr10 76067918 76067966 -64248799 + Cheshire DNA MER1_type 1616 1665 -755 901 112 0 13 chr10 76067966 76068118 -64248647 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 1732 169 3 10 chr10 76068123 76068413 -64248352 - AluSx SINE Alu -17 295 8 3902 171 53 103 chr10 76068413 76068974 -64247791 + Cheshire DNA MER1_type 1669 2152 -268 2320 99 0 3 chr10 76068974 76069276 -64247489 + AluSg SINE Alu 1 301 -9 3902 171 53 103 chr10 76069276 76069370 -64247395 + Cheshire DNA MER1_type 2152 2249 -171 389 333 0 0 chr10 76069662 76069833 -64246932 + C-rich Low_complexity Low_complexity 1 171 0 807 162 157 9 chr10 76070113 76070329 -64246436 - Cheshire DNA MER1_type -1293 1127 880 1054 169 104 130 chr10 76070331 76070639 -64246126 - AluJo SINE Alu -2 300 1 768 172 0 0 chr10 76070656 76070784 -64245981 - FLAM_C SINE Alu -7 136 9 3105 223 66 36 chr10 76070790 76071659 -64245106 - Cheshire DNA MER1_type -1524 896 2 413 304 212 14 chr10 76072201 76072349 -64244416 - L1ME LINE L1 -303 5818 5701 2318 84 0 10 chr10 76072349 76072660 -64244105 + AluY SINE Alu 1 308 -3 413 304 212 14 chr10 76072660 76072879 -64243886 - L1ME LINE L1 -420 5701 5359 459 295 148 14 chr10 76073146 76073559 -64243206 + L1M4 LINE L1 3081 3548 -2598 481 206 206 0 chr10 76073784 76073973 -64242792 + MER2 DNA MER2_type 118 345 0 183 291 139 25 chr10 76073974 76074053 -64242712 - MIR SINE MIR -162 100 13 207 194 0 0 chr10 76074159 76074195 -64242570 + CT-rich Low_complexity Low_complexity 3 38 0 827 210 73 59 chr10 76074323 76074426 -64242339 - L1MDa LINE L1 -4853 1687 1587 1724 187 6 22 chr10 76074426 76074741 -64242024 - AluJo SINE Alu 0 312 3 827 210 73 59 chr10 76074741 76075060 -64241705 - L1MDa LINE L1 -4953 1587 1259 202 189 0 0 chr10 76077571 76077608 -64239157 + CT-rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr10 76078728 76078764 -64238001 + AT_rich Low_complexity Low_complexity 1 36 0 256 206 140 37 chr10 76079822 76079929 -64236836 - L1ME4a LINE L1 -110 6011 5894 351 250 56 83 chr10 76080495 76080604 -64236161 + L1M4 LINE L1 4508 4610 -1536 2246 93 0 0 chr10 76080604 76080893 -64235872 + AluSc SINE Alu 1 289 -20 351 250 56 83 chr10 76080893 76080999 -64235766 + L1M4 LINE L1 4610 4717 -1429 191 167 24 0 chr10 76081015 76081057 -64235708 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 1778 150 6 41 chr10 76081343 76081663 -64235102 + AluJb SINE Alu 1 309 -3 262 274 72 49 chr10 76082137 76082360 -64234405 - HAL1 LINE L1 -898 1609 1382 332 322 45 50 chr10 76082422 76082624 -64234141 - L1MEd LINE L1 -4929 1190 990 240 221 26 0 chr10 76083615 76083692 -64233073 - L1ME4a LINE L1 -689 5432 5354 237 250 0 0 chr10 76083969 76084077 -64232688 + (TA)n Simple_repeat Simple_repeat 1 108 0 2222 117 0 7 chr10 76084673 76084981 -64231784 + AluSx SINE Alu 1 306 -6 2142 156 11 21 chr10 76085064 76085442 -64231323 + THE1C LTR MaLR 1 374 -1 909 162 0 0 chr10 76086166 76086302 -64230463 + FLAM_C SINE Alu 6 141 -2 183 42 0 0 chr10 76086493 76086517 -64230248 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2276 86 0 0 chr10 76086519 76086797 -64229968 - AluSc SINE Alu -31 278 1 1370 216 14 21 chr10 76086888 76087179 -64229586 - AluJo SINE Alu -23 289 1 1684 161 46 54 chr10 76087951 76088323 -64228442 - MLT1B LTR MaLR -2 388 20 2875 226 122 24 chr10 76088407 76089342 -64227423 - L1M4c LINE L1 -4114 2270 1244 24 0 0 0 chr10 76089839 76089863 -64226902 + AT_rich Low_complexity Low_complexity 1 24 0 1644 145 0 8 chr10 76089997 76090246 -64226519 - AluJb SINE Alu -10 302 56 287 229 12 42 chr10 76091402 76091568 -64225197 + CT-rich Low_complexity Low_complexity 3 163 0 244 302 146 0 chr10 76091702 76091798 -64224967 + Charlie2a DNA MER1_type 205 314 -2548 340 158 158 0 chr10 76091948 76092049 -64224716 + Charlie2a DNA MER1_type 1469 1585 -1277 852 157 31 167 chr10 76092146 76092277 -64224488 - L1MB8 LINE L1 0 6178 6105 2484 74 0 0 chr10 76092277 76092587 -64224178 - AluY SINE Alu -1 310 1 852 157 31 167 chr10 76092587 76092742 -64224023 - L1MB8 LINE L1 -73 6105 5931 1642 189 0 23 chr10 76092746 76093047 -64223718 - AluJo SINE Alu -18 294 1 2608 179 43 17 chr10 76093062 76093599 -64223166 - L1MA6 LINE L1 -232 7487 6937 9390 181 48 21 chr10 76093601 76094574 -64222191 - L1MA6 LINE L1 -1379 6186 5240 1458 139 109 0 chr10 76094574 76094812 -64221953 - AluSx SINE Alu -13 299 36 9390 181 48 21 chr10 76094812 76095038 -64221727 - L1MA6 LINE L1 -2325 5240 5022 1583 148 22 71 chr10 76095038 76095349 -64221416 + AluJo SINE Alu 5 300 -12 9390 181 48 21 chr10 76095349 76096324 -64220441 - L1MA6 LINE L1 -2543 5022 3953 252 26 26 0 chr10 76096511 76096550 -64220215 + L1PA15 LINE L1 6122 6161 -4 309 258 63 79 chr10 76096605 76096709 -64220056 - L1MA6 LINE L1 -4216 3349 3245 2124 127 0 0 chr10 76096709 76097000 -64219765 - AluSx SINE Alu -21 291 1 309 258 63 79 chr10 76097000 76097147 -64219618 - L1MA6 LINE L1 -4320 3245 3102 238 264 129 36 chr10 76097158 76097268 -64219497 - L1MA6 LINE L1 -5029 1536 1409 2184 133 16 34 chr10 76097268 76097650 -64219115 + THE1C LTR MaLR 1 375 0 238 264 129 36 chr10 76097650 76097679 -64219086 - L1MA6 LINE L1 -5156 1409 1384 733 53 0 0 chr10 76097750 76097837 -64218928 + L1PA3 LINE L1 6045 6140 -34 541 129 0 105 chr10 76097750 76097837 -64218928 + L1PA8 LINE L1 6062 6134 -38 236 47 0 47 chr10 76097837 76097880 -64218885 + (TAAAA)n Simple_repeat Simple_repeat 1 140 0 733 53 0 0 chr10 76097880 76097916 -64218849 + L1PA3 LINE L1 6140 6174 0 541 129 0 105 chr10 76097880 76097916 -64218849 + L1PA8 LINE L1 6134 6172 0 1791 175 0 20 chr10 76098671 76098963 -64217802 + AluJb SINE Alu 1 286 -26 28 0 0 0 chr10 76098965 76098993 -64217772 + AT_rich Low_complexity Low_complexity 1 28 0 1005 198 0 0 chr10 76099057 76099224 -64217541 + FAM SINE Alu 1 167 -8 1224 263 68 39 chr10 76099229 76099720 -64217045 + MLT1F LTR MaLR 9 512 -30 2185 114 3 7 chr10 76100269 76100577 -64216188 - AluSq SINE Alu -6 307 1 1758 179 0 16 chr10 76100639 76100947 -64215818 - AluSx SINE Alu -7 305 3 667 247 46 5 chr10 76102800 76102994 -64213771 - L1ME1 LINE L1 -8 6158 5957 1434 247 55 18 chr10 76103028 76103408 -64213357 + LTR40c LTR ERVL 60 453 -12 1137 165 110 8 chr10 76103467 76103704 -64213061 + MER76 LTR ERV 1 261 -427 21 0 0 0 chr10 76103840 76103861 -64212904 + AT_rich Low_complexity Low_complexity 1 21 0 1904 216 111 43 chr10 76103919 76104994 -64211771 - L1MC4 LINE L1 -745 5401 4748 1955 158 20 26 chr10 76105223 76105565 -64211200 + MER2 DNA MER2_type 1 340 -5 641 308 137 19 chr10 76105665 76106029 -64210736 - LTR16C LTR ERVL -13 478 72 1453 180 3 48 chr10 76106328 76106644 -64210121 - AluSq SINE Alu -11 302 1 210 37 0 0 chr10 76106683 76106710 -64210055 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2636 250 56 11 chr10 76106725 76107480 -64209285 + L1MD2 LINE L1 5358 6146 -213 1699 154 3 33 chr10 76107529 76107828 -64208937 - AluJo SINE Alu -22 290 1 2186 80 7 30 chr10 76109812 76110114 -64206651 + AluSq SINE Alu 7 301 -12 248 213 40 13 chr10 76110606 76110681 -64206084 - L1MB7 LINE L1 -116 6068 5992 3834 214 28 32 chr10 76110681 76111040 -64205725 - L1MC4 LINE L1 -1464 4682 4323 1816 172 0 7 chr10 76111040 76111343 -64205422 - AluJo SINE Alu -11 301 1 333 0 0 0 chr10 76111348 76111385 -64205380 + (TG)n Simple_repeat Simple_repeat 2 38 0 3834 214 28 32 chr10 76111385 76111764 -64205001 - L1MC4 LINE L1 -1827 4319 3940 1789 179 123 10 chr10 76111764 76112154 -64204611 - Tigger2a DNA MER2_type 0 434 1 3834 214 28 32 chr10 76112154 76112174 -64204591 - L1MC4 LINE L1 -2206 3940 3921 2158 119 3 0 chr10 76112174 76112476 -64204289 - AluSq SINE Alu -10 303 1 3834 214 28 32 chr10 76112476 76112837 -64203928 - L1MC4 LINE L1 -2225 3921 3559 226 306 92 20 chr10 76113393 76113491 -64203274 - L3 LINE CR1 -47 1530 1426 639 265 15 15 chr10 76113600 76113804 -64202961 - L1MC4 LINE L1 -2573 3573 3370 365 218 14 82 chr10 76113798 76113875 -64202890 - L1MC4 LINE L1 -3778 2368 2304 * 1590 189 10 27 chr10 76113875 76114176 -64202589 - AluJo SINE Alu -16 296 1 365 218 14 82 chr10 76114176 76114245 -64202520 - L1MC4 LINE L1 -3842 2304 2232 1842 157 11 0 chr10 76114452 76114760 -64202005 - AluSx SINE Alu 0 311 1 2384 60 13 10 chr10 76115405 76115705 -64201060 + AluY SINE Alu 11 311 0 29023 126 18 60 chr10 76115709 76122155 -64194610 + L1PA8 LINE L1 13 6171 -1 2380 88 0 0 chr10 76122155 76122449 -64194316 + AluY SINE Alu 1 294 -17 197 283 292 9 chr10 76123265 76123378 -64193387 + MIR3 SINE MIR 52 196 -12 311 246 0 0 chr10 76123667 76123724 -64193041 - AluJ/FLAM SINE Alu -242 60 4 183 80 0 0 chr10 76124551 76124576 -64192189 + (TG)n Simple_repeat Simple_repeat 2 26 0 2905 6 0 0 chr10 76124603 76124918 -64191847 - AluYb8 SINE Alu -3 315 1 490 283 76 30 chr10 76125587 76125824 -64190941 + LTR40b LTR ERVL 137 384 -78 1197 179 79 61 chr10 76125924 76126203 -64190562 - AluJo SINE Alu -18 284 1 559 181 9 26 chr10 76127546 76127662 -64189103 - FRAM SINE Alu -23 153 40 2569 136 200 46 chr10 76127662 76128029 -64188736 - L1 LINE L1 -1112 5216 4907 1601 169 20 40 chr10 76128029 76128330 -64188435 + AluJo SINE Alu 1 295 -17 2569 136 200 46 chr10 76128330 76128632 -64188133 - L1 LINE L1 -1421 4907 4444 678 215 0 0 chr10 76128666 76128796 -64187969 - L1 LINE L1 -3417 2911 2782 4477 231 59 47 chr10 76128911 76129520 -64187245 - L1 LINE L1 -3417 2911 2311 2232 87 7 0 chr10 76129520 76129806 -64186959 - AluSg SINE Alu -22 288 1 4477 231 59 47 chr10 76129806 76131505 -64185260 - L1 LINE L1 -4017 2311 558 277 320 68 0 chr10 76132354 76132457 -64184308 - L1 LINE L1 -5501 748 639 325 347 45 18 chr10 76133031 76133253 -64183512 + L2 LINE L2 1893 2120 -1194 486 0 0 0 chr10 76133290 76133344 -64183421 + (TG)n Simple_repeat Simple_repeat 2 55 0 185 370 49 44 chr10 76133466 76133669 -64183096 + L2 LINE L2 2549 2752 -562 2039 181 34 18 chr10 76133713 76134155 -64182610 - L1MB5 LINE L1 -2 6172 5724 677 176 0 0 chr10 76134174 76134299 -64182466 - L1MB5 LINE L1 -1888 4258 4134 * 1418 209 5 49 chr10 76134289 76134676 -64182089 - L1M3 LINE L1 -513 5667 5298 21 0 0 0 chr10 76135030 76135051 -64181714 + AT_rich Low_complexity Low_complexity 1 21 0 1983 166 0 0 chr10 76135253 76135549 -64181216 + AluJb SINE Alu 4 299 -13 2006 233 30 2 chr10 76136120 76136550 -64180215 - MER82 DNA MER2_type -6 647 206 21 36 0 0 chr10 76136570 76136598 -64180167 + AT_rich Low_complexity Low_complexity 1 28 0 430 237 7 43 chr10 76136604 76136743 -64180022 - MER82 DNA MER2_type -449 204 71 1367 209 51 0 chr10 76136758 76137011 -64179754 - AluJb SINE Alu -46 266 1 1959 141 10 7 chr10 76137234 76137531 -64179234 - AluSx SINE Alu -14 298 1 1479 196 4 8 chr10 76137680 76137945 -64178820 + AluJb SINE Alu 6 269 -43 254 214 36 0 chr10 76138071 76138127 -64178638 + L1MEc LINE L1 40 97 -6299 1953 242 29 8 chr10 76138134 76138725 -64178040 + L1M4 LINE L1 3881 4483 -1663 228 219 0 31 chr10 76138793 76138857 -64177908 + L1MA10 LINE L1 6237 6298 -36 43 56 0 0 chr10 76139285 76139356 -64177409 + AT_rich Low_complexity Low_complexity 1 71 0 740 139 35 9 chr10 76139359 76139474 -64177291 - FLAM_C SINE Alu -13 120 3 678 213 19 25 chr10 76139777 76139937 -64176828 + L1MB8 LINE L1 5978 6136 -42 441 228 0 32 chr10 76139933 76140056 -64176709 + L1MB8 LINE L1 4160 4278 -1868 * 251 33 0 0 chr10 76140143 76140173 -64176592 - LTR6A LTR ERV1 -462 102 73 4035 209 55 16 chr10 76141097 76142917 -64173848 + L1MB8 LINE L1 4276 6178 0 606 216 184 18 chr10 76142922 76143140 -64173625 - Charlie1 DNA MER1_type -564 2197 1944 220 222 16 0 chr10 76144470 76144533 -64172232 + T-rich Low_complexity Low_complexity 2 65 0 323 255 184 55 chr10 76145004 76145553 -64171212 - L1MC5 LINE L1 -50 7911 7292 2044 255 63 60 chr10 76145809 76146520 -64170245 - MER72 LTR ERV1 0 722 10 385 226 38 75 chr10 76146618 76146724 -64170041 + MIR SINE MIR 88 189 -73 412 183 158 0 chr10 76146794 76146876 -64169889 + FRAM SINE Alu 63 157 -19 1150 263 101 61 chr10 76147284 76147422 -64169343 - L2 LINE L2 -275 3038 2907 811 153 8 8 chr10 76147422 76147553 -64169212 + FLAM_A SINE Alu 1 131 -2 1150 263 101 61 chr10 76147553 76147961 -64168804 - L2 LINE L2 -406 2907 2482 521 313 128 42 chr10 76147963 76148366 -64168399 + L2 LINE L2 2619 3085 -228 1606 172 7 4 chr10 76148366 76148639 -64168126 + AluJo SINE Alu 21 294 -18 521 313 128 42 chr10 76148639 76148871 -64167894 + L2 LINE L2 3085 3296 -17 2217 104 0 3 chr10 76149080 76149369 -64167396 + AluY SINE Alu 3 290 -21 24 96 0 0 chr10 76149741 76149814 -64166951 + AT_rich Low_complexity Low_complexity 1 73 0 1921 155 0 3 chr10 76150705 76151001 -64165764 - AluJb SINE Alu -17 295 1 212 197 0 30 chr10 76151686 76151752 -64165013 + (TAA)n Simple_repeat Simple_repeat 1 64 0 285 51 0 0 chr10 76151989 76152028 -64164737 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 840 269 171 25 chr10 76152115 76152588 -64164177 - MER34 LTR ERV1 0 542 1 215 299 60 0 chr10 76152801 76152868 -64163897 - L2 LINE L2 -1 3312 3242 2168 120 0 3 chr10 76152990 76153291 -64163474 + AluSx SINE Alu 1 300 -12 681 177 145 11 chr10 76153619 76153805 -64162960 + L1MB7 LINE L1 5973 6183 -1 243 265 12 48 chr10 76153805 76153888 -64162877 - L2 LINE L2 -687 2627 2548 366 327 81 27 chr10 76153908 76154131 -64162634 - L2 LINE L2 -1011 2303 2069 240 304 0 25 chr10 76154131 76154210 -64162555 + L2 LINE L2 3237 3313 0 251 325 0 13 chr10 76154269 76154346 -64162419 - MIR SINE MIR -24 238 163 1382 209 91 30 chr10 76155407 76155544 -64161221 + MER119 DNA MER1_type 7 134 -449 2189 102 0 0 chr10 76155544 76155837 -64160928 - AluSg SINE Alu -17 293 1 1382 209 91 30 chr10 76155837 76156029 -64160736 + MER119 DNA MER1_type 134 356 -227 271 276 115 0 chr10 76156035 76156122 -64160643 + MER119 DNA MER1_type 462 558 -25 2152 113 13 7 chr10 76156499 76156809 -64159956 - AluSp SINE Alu -1 312 1 1537 226 32 2 chr10 76156936 76157379 -64159386 - L1M4 LINE L1 -1463 4683 4228 541 303 67 19 chr10 76157447 76157761 -64159004 - L1MEc LINE L1 -6031 365 37 316 269 96 26 chr10 76159009 76159165 -64157600 - L1MC4 LINE L1 0 8042 7876 374 298 198 16 chr10 76159177 76159550 -64157215 - L1MC4 LINE L1 -265 7777 7337 445 284 137 52 chr10 76159561 76160100 -64156665 - L1MC4a LINE L1 -1269 6539 5955 442 243 28 19 chr10 76160140 76160247 -64156518 + AluJo SINE Alu 113 220 -92 405 0 0 0 chr10 76160255 76160300 -64156465 + (CA)n Simple_repeat Simple_repeat 2 46 0 2611 194 47 10 chr10 76160303 76161345 -64155420 - L1MB2 LINE L1 -1 6170 5046 28 29 0 0 chr10 76161346 76161381 -64155384 + AT_rich Low_complexity Low_complexity 1 35 0 588 232 87 116 chr10 76161402 76161678 -64155087 - L1MC4a LINE L1 -1921 5887 5620 590 267 33 85 chr10 76162163 76162433 -64154332 - MIR SINE MIR -4 258 3 231 322 20 86 chr10 76163114 76163266 -64153499 - MIR3 SINE MIR -28 180 39 213 65 0 0 chr10 76163287 76163318 -64153447 + (GA)n Simple_repeat Simple_repeat 1 31 0 348 390 31 0 chr10 76163393 76163588 -64153177 - L3 LINE CR1 -80 1497 1297 269 299 20 15 chr10 76163776 76163896 -64152869 + CT-rich Low_complexity Low_complexity 1 120 0 2072 112 29 0 chr10 76164339 76164617 -64152148 + AluSx SINE Alu 1 286 -26 1746 174 3 16 chr10 76164854 76165164 -64151601 + AluJb SINE Alu 1 306 -6 1813 122 4 19 chr10 76165274 76165545 -64151220 + AluSq SINE Alu 1 267 -46 2345 92 3 0 chr10 76165812 76166118 -64150647 + AluSc SINE Alu 1 307 -2 24 77 0 0 chr10 76169435 76169487 -64147278 + AT_rich Low_complexity Low_complexity 1 52 0 3466 137 4 6 chr10 76169511 76170035 -64146730 - MER1A DNA MER1_type -4 523 1 1504 198 0 41 chr10 76170627 76170941 -64145824 + AluJb SINE Alu 1 301 -11 589 266 0 0 chr10 76171064 76171192 -64145573 + FRAM SINE Alu 1 128 -48 1674 303 53 26 chr10 76171292 76172099 -64144666 - L2 LINE L2 -22 3291 2459 21 36 0 0 chr10 76173486 76173514 -64143251 + AT_rich Low_complexity Low_complexity 1 28 0 234 128 21 0 chr10 76174076 76174123 -64142642 + FRAM SINE Alu 118 165 -2 21 36 0 0 chr10 76174259 76174287 -64142478 + AT_rich Low_complexity Low_complexity 1 28 0 34 42 0 0 chr10 76174600 76174648 -64142117 + AT_rich Low_complexity Low_complexity 1 48 0 1606 198 0 7 chr10 76174675 76174986 -64141779 - AluJo SINE Alu 0 309 1 32 81 0 0 chr10 76175457 76175531 -64141234 + AT_rich Low_complexity Low_complexity 1 74 0 25 31 0 0 chr10 76175790 76175822 -64140943 + AT_rich Low_complexity Low_complexity 1 32 0 459 237 0 0 chr10 76178400 76178497 -64138268 + AluJ/FLAM SINE Alu 3 99 -213 17300 93 11 8 chr10 76178498 76181008 -64135757 - L1P LINE L1 -3640 2506 22 2074 107 0 4 chr10 76181012 76181318 -64135447 - AluY SINE Alu 0 305 1 1245 265 49 20 chr10 76181376 76181843 -64134922 - L1MDa LINE L1 -4469 2094 1463 754 171 0 16 chr10 76181853 76181982 -64134783 + FLAM_C SINE Alu 3 129 -14 316 294 27 17 chr10 76182000 76182159 -64134606 - L1MDa LINE L1 -4840 1542 1292 * 622 180 80 0 chr10 76182158 76182308 -64134457 - L1MDa LINE L1 -5161 1402 1241 670 186 54 8 chr10 76182380 76182509 -64134256 + MER1B DNA MER1_type 2 136 -161 808 19 0 29 chr10 76182614 76182717 -64134048 - L1PA4 LINE L1 0 6155 6056 1271 129 16 21 chr10 76182723 76182917 -64133848 + MER1B DNA MER1_type 142 334 -5 891 295 126 7 chr10 76182929 76183390 -64133375 - L1MDa LINE L1 -5824 739 224 664 254 118 71 chr10 76183387 76183673 -64133092 - L1MEc LINE L1 -4842 1554 1283 * 378 0 0 0 chr10 76183673 76183715 -64133050 + (GAA)n Simple_repeat Simple_repeat 2 43 0 664 254 118 71 chr10 76183715 76183815 -64132950 - L1MEc LINE L1 -5113 1283 1189 2209 119 0 0 chr10 76183815 76184125 -64132640 - AluSg SINE Alu 0 310 1 1405 193 98 0 chr10 76184127 76184401 -64132364 - AluJo SINE Alu -10 302 2 664 254 118 71 chr10 76184401 76184682 -64132083 - L1MEc LINE L1 -5207 1189 852 424 263 187 75 chr10 76184696 76184974 -64131791 - L1MEc LINE L1 -5940 456 148 1781 150 0 42 chr10 76185133 76185439 -64131326 - AluSx SINE Alu -19 293 1 2115 159 59 31 chr10 76185683 76186105 -64130660 - Tigger2a DNA MER2_type 0 434 1 28 29 0 0 chr10 76187263 76187298 -64129467 + AT_rich Low_complexity Low_complexity 1 35 0 1721 146 3 28 chr10 76187538 76187851 -64128914 + AluSx SINE Alu 1 306 0 21 0 0 0 chr10 76188061 76188082 -64128683 + AT_rich Low_complexity Low_complexity 1 21 0 5154 129 11 1 chr10 76188549 76189334 -64127431 - Tigger1 DNA MER2_type -44 2374 1582 496 154 8 31 chr10 76189334 76189587 -64127178 - AluJb SINE Alu -18 294 1 8989 139 45 16 chr10 76189587 76189922 -64126843 - Tigger1 DNA MER2_type -829 1589 1265 2132 115 7 0 chr10 76189922 76190217 -64126548 + AluSq SINE Alu 1 297 -16 8989 139 45 16 chr10 76190217 76191397 -64125368 - Tigger1 DNA MER2_type -1153 1265 30 2006 89 89 0 chr10 76191600 76191880 -64124885 + AluSx SINE Alu 1 305 -7 701 251 17 6 chr10 76192736 76192911 -64123854 - L1MB7 LINE L1 -12 6172 5996 375 78 0 0 chr10 76193126 76193162 -64123603 + (CA)n Simple_repeat Simple_repeat 1 87 0 375 78 0 0 chr10 76193162 76193213 -64123552 + (CA)n Simple_repeat Simple_repeat 2 52 0 272 27 27 0 chr10 76193692 76193729 -64123036 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 21 0 0 0 chr10 76194044 76194065 -64122700 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 76194140 76194165 -64122600 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr10 76197654 76197691 -64119074 + AT_rich Low_complexity Low_complexity 1 37 0 5661 201 93 78 chr10 76198027 76199124 -64117641 + L1MC3 LINE L1 5987 7221 -564 300 277 10 30 chr10 76199124 76199225 -64117540 + MLT1F1 LTR MaLR 36 134 -433 5661 201 93 78 chr10 76199225 76199792 -64116973 + L1MC3 LINE L1 7221 7778 -7 2343 81 16 3 chr10 76201403 76201712 -64115053 + AluSp SINE Alu 1 313 0 564 231 77 59 chr10 76201817 76202206 -64114559 - L1MEd LINE L1 -5019 1100 705 830 299 37 40 chr10 76202210 76202561 -64114204 - L1MEd LINE L1 -5448 671 322 675 236 97 12 chr10 76202620 76202785 -64113980 + MER63A DNA MER1_type 1 179 -31 351 287 116 64 chr10 76202812 76203063 -64113702 - L1MEd LINE L1 -5853 266 3 550 225 142 87 chr10 76203454 76203942 -64112823 + L1MC4 LINE L1 5689 6148 -1660 1602 75 5 0 chr10 76203942 76204154 -64112611 - L1PA7 LINE L1 -3 6151 5939 550 225 142 87 chr10 76204154 76204337 -64112428 + L1MC4 LINE L1 6148 6319 -1489 2316 78 0 0 chr10 76204337 76204644 -64112121 - AluY SINE Alu 0 307 1 550 225 142 87 chr10 76204644 76204984 -64111781 + L1MC4 LINE L1 6319 6610 -1198 1423 237 109 12 chr10 76204995 76205417 -64111348 - MLT1C LTR MaLR -2 465 3 1482 271 65 50 chr10 76205420 76206118 -64110647 + L1MC4 LINE L1 6801 7508 -534 318 224 59 35 chr10 76206946 76207031 -64109734 - L2 LINE L2 -5 3308 3222 912 226 52 9 chr10 76207063 76207293 -64109472 - MIR SINE MIR 0 262 23 1073 145 77 9 chr10 76207293 76207514 -64109251 - L1MD1 LINE L1 0 6242 6007 573 206 0 0 chr10 76207516 76207618 -64109147 - L1MD1 LINE L1 -596 5763 5662 800 152 14 29 chr10 76207619 76207757 -64109008 + AluJo SINE Alu 1 136 -176 512 289 57 0 chr10 76207877 76208036 -64108729 - L2 LINE L2 -280 3033 2866 256 269 0 0 chr10 76208071 76208138 -64108627 - L2 LINE L2 -626 2688 2622 846 0 0 0 chr10 76208144 76208238 -64108527 + AluYa5/8 SINE Alu 212 305 -5 568 232 66 20 chr10 76208246 76208397 -64108368 - L2 LINE L2 -704 2610 2453 2023 135 0 0 chr10 76208605 76208887 -64107878 + AluSx SINE Alu 1 282 -30 198 0 0 0 chr10 76208887 76208909 -64107856 + (CAAT)n Simple_repeat Simple_repeat 1 22 0 279 167 0 0 chr10 76208917 76208959 -64107806 + Alu SINE Alu 240 281 -19 1440 200 4 8 chr10 76209060 76209325 -64107440 + AluJo SINE Alu 4 267 -45 25 0 0 0 chr10 76209325 76209350 -64107415 + AT_rich Low_complexity Low_complexity 1 25 0 243 273 68 0 chr10 76211460 76211548 -64105217 + MER5C DNA MER1_type 31 124 -200 1452 123 40 6 chr10 76211560 76211990 -64104775 - LTR54 LTR ERV1 -5 505 1 232 246 87 0 chr10 76212122 76212191 -64104574 + MER5C DNA MER1_type 249 323 -1 301 266 22 93 chr10 76212449 76212588 -64104177 - MIR SINE MIR -64 198 70 1271 276 56 19 chr10 76212635 76213168 -64103597 + L1M4 LINE L1 1289 1841 -4543 339 242 32 11 chr10 76213327 76213422 -64103343 + L1M4 LINE L1 1898 1994 -4569 849 87 0 0 chr10 76213426 76213530 -64103235 + AluSc SINE Alu 154 257 -52 626 60 0 0 chr10 76213530 76213613 -64103152 - Tigger2 DNA MER2_type -239 2479 2397 282 234 39 0 chr10 76213656 76213733 -64103032 + L1M4 LINE L1 2189 2268 -4295 503 225 92 46 chr10 76213755 76213995 -64102770 + L1M4 LINE L1 5078 5328 -1054 455 228 48 21 chr10 76213985 76214130 -64102635 + L1M4 LINE L1 4112 4260 -1886 * 334 290 97 7 chr10 76214133 76214288 -64102477 + L1M4c LINE L1 3348 3516 -2866 920 316 128 60 chr10 76214421 76215379 -64101386 + L2 LINE L2 2186 3230 -83 2071 101 10 24 chr10 76215379 76215676 -64101089 - AluSg SINE Alu -17 293 1 920 316 128 60 chr10 76215676 76215758 -64101007 + L2 LINE L2 3230 3305 -8 22 88 0 0 chr10 76216892 76216949 -64099816 + AT_rich Low_complexity Low_complexity 1 57 0 539 340 48 0 chr10 76217374 76217562 -64099203 - MIR SINE MIR -61 201 5 194 310 58 58 chr10 76217989 76218076 -64098689 - L2 LINE L2 0 3272 3186 1756 188 110 8 chr10 76218252 76218674 -64098091 + L1MB8 LINE L1 5322 5777 -407 * 1926 157 51 11 chr10 76218666 76219146 -64097619 + L1MA9 LINE L1 4947 5440 -753 750 178 0 16 chr10 76219160 76219289 -64097476 + FLAM_A SINE Alu 8 134 -8 4036 166 60 18 chr10 76219319 76219510 -64097255 + L1MA9 LINE L1 5433 5614 -698 2031 131 0 0 chr10 76219510 76219820 -64096945 + AluSx SINE Alu 1 310 0 4036 166 60 18 chr10 76219820 76220471 -64096294 + L1MA9 LINE L1 5614 6312 0 1647 189 43 20 chr10 76220471 76220862 -64095903 + L1MB8 LINE L1 5774 6173 -5 183 294 59 0 chr10 76222832 76222883 -64093882 + MIR SINE MIR 99 152 -56 257 208 19 0 chr10 76223437 76223490 -64093275 + MER103 DNA DNA 82 135 -31 635 225 107 112 chr10 76224201 76224735 -64092030 - MER34 LTR ERV1 -6 536 6 491 316 18 6 chr10 76224808 76224976 -64091789 + CT-rich Low_complexity Low_complexity 2 171 0 258 163 0 75 chr10 76224988 76225068 -64091697 + C-rich Low_complexity Low_complexity 2 75 0 568 166 119 129 chr10 76225312 76225505 -64091260 - MER34 LTR ERV1 -358 227 1 419 265 44 29 chr10 76225591 76225727 -64091038 + MIR SINE MIR 116 253 -9 2094 130 3 0 chr10 76225804 76226096 -64090669 + AluSx SINE Alu 1 293 -19 518 147 0 101 chr10 76226109 76226218 -64090547 + FLAM_A SINE Alu 25 122 -20 436 263 95 95 chr10 76226238 76226428 -64090337 + MIR SINE MIR 61 250 -12 1038 213 14 112 chr10 76226881 76227139 -64089626 - MLT2C1 LTR ERVL 0 397 198 435 34 17 0 chr10 76227139 76227198 -64089567 - L1PA4 LINE L1 -3 6152 6093 1038 213 14 112 chr10 76227198 76227376 -64089389 - MLT2C1 LTR ERVL -199 198 4 262 337 119 0 chr10 76227701 76227802 -64088963 + L2 LINE L2 3149 3261 -11 1645 174 10 30 chr10 76227936 76228235 -64088530 + AluJb SINE Alu 1 293 -19 283 266 150 0 chr10 76228302 76228415 -64088350 + L2 LINE L2 3184 3313 0 225 0 0 0 chr10 76228980 76229005 -64087760 + (T)n Simple_repeat Simple_repeat 1 25 0 26 50 0 0 chr10 76232290 76232330 -64084435 + AT_rich Low_complexity Low_complexity 1 40 0 255 317 175 0 chr10 76232373 76232493 -64084272 + MIR SINE MIR 3 143 -119 877 226 91 43 chr10 76232493 76233004 -64083761 - MER39 LTR ERV1 0 687 8 338 272 107 0 chr10 76233019 76233122 -64083643 + MIR SINE MIR 145 258 -4 1010 153 71 46 chr10 76233144 76233340 -64083425 + AluJo SINE Alu 11 211 -101 1920 88 0 25 chr10 76233346 76233424 -64083341 - L1P LINE L1 -4215 1931 1853 2185 89 0 4 chr10 76233424 76233705 -64083060 - AluSc SINE Alu -13 296 17 1920 88 0 25 chr10 76233705 76233911 -64082854 - L1P LINE L1 -4293 1853 1654 * 7353 108 8 2 chr10 76233910 76234305 -64082460 + L1P LINE L1 2447 2838 -3308 2558 34 24 0 chr10 76234305 76234603 -64082162 + AluY SINE Alu 1 305 -6 7353 108 8 2 chr10 76234603 76235327 -64081438 + L1P LINE L1 2838 3573 -2573 4935 52 7 0 chr10 76235327 76235936 -64080829 + L1PA7 LINE L1 5535 6150 -4 1372 194 9 41 chr10 76236032 76236351 -64080414 - AluJb SINE Alu -3 309 1 2128 110 3 7 chr10 76236910 76237200 -64079565 + AluSx SINE Alu 1 289 -23 203 61 30 0 chr10 76237203 76237236 -64079529 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 816 224 131 4 chr10 76237250 76237495 -64079270 - L1MC4a LINE L1 -820 6988 6713 1522 205 20 3 chr10 76237501 76237798 -64078967 + AluJb SINE Alu 3 304 -8 324 184 44 9 chr10 76237798 76237912 -64078853 + GA-rich Low_complexity Low_complexity 1 118 0 1140 251 69 6 chr10 76237918 76238280 -64078485 - L1MC4 LINE L1 -1238 6804 6420 1395 201 65 14 chr10 76238282 76238560 -64078205 + AluJb SINE Alu 1 292 -20 527 302 67 22 chr10 76238919 76239234 -64077531 + L1MEc LINE L1 37 365 -6031 543 256 36 12 chr10 76239302 76239552 -64077213 + L1M4 LINE L1 4228 4483 -1663 1563 130 0 0 chr10 76239899 76240114 -64076651 + AluSg/x SINE Alu 84 298 -12 1693 166 28 47 chr10 76240115 76240476 -64076289 + L1MB2 LINE L1 5778 6131 -40 846 153 0 0 chr10 76240477 76240601 -64076164 + AluJb SINE Alu 3 126 -186 283 372 34 7 chr10 76240778 76240926 -64075839 + L2 LINE L2 2938 3089 -224 26 0 0 0 chr10 76241245 76241271 -64075494 + AT_rich Low_complexity Low_complexity 1 26 0 364 300 2 31 chr10 76241476 76241623 -64075142 + FLAM_A SINE Alu 1 123 -10 2120 144 0 0 chr10 76242395 76242707 -64074058 - AluSq SINE Alu -1 312 1 21 36 0 0 chr10 76242933 76242961 -64073804 + AT_rich Low_complexity Low_complexity 1 28 0 396 246 85 15 chr10 76243654 76243784 -64072981 + MIR3 SINE MIR 57 195 -13 237 108 0 0 chr10 76244023 76244060 -64072705 + (TG)n Simple_repeat Simple_repeat 1 37 0 1849 181 0 3 chr10 76244130 76244423 -64072342 + AluJo SINE Alu 1 292 -20 323 208 0 39 chr10 76244441 76244518 -64072247 - AluJo SINE Alu -9 293 220 2533 34 24 0 chr10 76244622 76244917 -64071848 - AluY SINE Alu -9 302 1 2748 101 0 0 chr10 76244917 76245312 -64071453 - L1P LINE L1 -3305 2841 2447 1920 88 0 25 chr10 76245311 76245517 -64071248 + L1P LINE L1 1654 1853 -4293 * 2185 89 0 4 chr10 76245517 76245798 -64070967 + AluSc SINE Alu 17 296 -13 1920 88 0 25 chr10 76245798 76245876 -64070889 + L1P LINE L1 1853 1931 -4215 989 175 68 44 chr10 76245882 76246088 -64070677 - AluJo SINE Alu -101 211 1 3501 137 4 6 chr10 76246680 76247204 -64069561 + MER1A DNA MER1_type 1 523 -4 24 77 0 0 chr10 76247228 76247280 -64069485 + AT_rich Low_complexity Low_complexity 1 52 0 2217 104 0 3 chr10 76247966 76248255 -64068510 + AluY SINE Alu 3 290 -21 24 96 0 0 chr10 76248627 76248700 -64068065 + AT_rich Low_complexity Low_complexity 1 73 0 1783 134 14 18 chr10 76249591 76249867 -64066898 - AluSx SINE Alu -17 295 21 521 300 163 23 chr10 76249890 76250270 -64066495 - L2 LINE L2 -234 3038 2619 1082 259 104 68 chr10 76250272 76250681 -64066084 + L2 LINE L2 2482 2907 -406 704 185 8 8 chr10 76250681 76250811 -64065954 - FLAM_A SINE Alu -3 130 1 1082 259 104 68 chr10 76250811 76250956 -64065809 + L2 LINE L2 2907 3045 -268 1273 148 0 0 chr10 76251515 76251697 -64065068 - AluJb SINE Alu -128 184 3 527 214 116 56 chr10 76251802 76252017 -64064748 - MER119 DNA MER1_type 0 583 356 6094 141 58 8 chr10 76252018 76253075 -64063690 + Tigger2 DNA MER2_type 1 1109 -1609 5866 145 16 25 chr10 76253067 76254063 -64062702 + Tigger2 DNA MER2_type 1479 2465 -253 1906 161 41 19 chr10 76254063 76254430 -64062335 - THE1C LTR MaLR 0 375 1 1262 169 22 13 chr10 76254438 76254669 -64062096 + Tigger2 DNA MER2_type 2486 2718 0 498 288 36 10 chr10 76254669 76254946 -64061819 - MER119 DNA MER1_type -228 355 1 184 375 48 52 chr10 76255537 76255788 -64060977 + L2 LINE L2 2725 2974 -340 544 217 50 0 chr10 76255810 76255930 -64060835 - MER58B DNA MER1_type 0 341 216 201 308 11 0 chr10 76255944 76256035 -64060730 + A-rich Low_complexity Low_complexity 4 95 0 28 29 0 0 chr10 76256472 76256507 -64060258 + AT_rich Low_complexity Low_complexity 1 35 0 345 374 26 36 chr10 76256824 76257019 -64059746 + MIR3 SINE MIR 8 200 -8 1816 170 40 10 chr10 76257077 76257449 -64059316 - L1MB5 LINE L1 -73 6101 5724 652 226 110 7 chr10 76258468 76258614 -64058151 + MER5A DNA MER1_type 2 162 -27 308 285 93 40 chr10 76258986 76259137 -64057628 - MIR SINE MIR -48 160 2 2429 61 0 0 chr10 76259336 76259629 -64057136 - AluY SINE Alu -18 293 1 538 248 42 64 chr10 76259660 76259971 -64056794 + L1MC4 LINE L1 6468 6771 -1271 1423 237 109 12 chr10 76259982 76260404 -64056361 - MLT1C LTR MaLR -2 465 3 1482 271 65 50 chr10 76260407 76261105 -64055660 + L1MC4 LINE L1 6801 7508 -534 318 224 59 35 chr10 76261933 76262018 -64054747 - L2 LINE L2 -5 3308 3222 912 226 52 9 chr10 76262050 76262280 -64054485 - MIR SINE MIR 0 262 23 1073 145 77 9 chr10 76262280 76262501 -64054264 - L1MD1 LINE L1 0 6242 6007 573 206 0 0 chr10 76262503 76262605 -64054160 - L1MD1 LINE L1 -596 5763 5662 800 152 14 29 chr10 76262606 76262744 -64054021 + AluJo SINE Alu 1 136 -176 300 298 0 53 chr10 76263027 76263121 -64053644 - L1MC4 LINE L1 -1340 6702 6614 305 281 62 0 chr10 76263139 76263235 -64053530 + L1MC4 LINE L1 6618 6719 -1323 549 145 0 0 chr10 76263237 76263320 -64053445 - FLAM_A SINE Alu -25 117 35 25 31 0 0 chr10 76263356 76263388 -64053377 + AT_rich Low_complexity Low_complexity 1 32 0 27 62 0 0 chr10 76263749 76263797 -64052968 + AT_rich Low_complexity Low_complexity 1 48 0 404 268 164 30 chr10 76263861 76264197 -64052568 - HAL1 LINE L1 -125 2382 2002 1246 134 0 0 chr10 76264322 76264501 -64052264 - AluSg/x SINE Alu 0 312 134 882 294 64 13 chr10 76264505 76264960 -64051805 - HAL1 LINE L1 -788 1719 1242 304 220 55 92 chr10 76264961 76265070 -64051695 - HAL1 LINE L1 -1594 913 809 402 305 124 62 chr10 76265240 76265660 -64051105 - HAL1 LINE L1 -1914 593 148 1481 176 0 26 chr10 76265818 76265932 -64050833 - AluJo SINE Alu -52 260 145 1861 132 79 25 chr10 76265932 76266288 -64050477 + THE1C LTR MaLR 1 375 0 1481 176 0 26 chr10 76266288 76266440 -64050325 - AluJo SINE Alu -167 145 1 677 196 0 36 chr10 76266650 76266788 -64049977 - FLAM_A SINE Alu 0 133 1 607 202 121 29 chr10 76267165 76267338 -64049427 - L2 LINE L2 0 3313 3125 610 214 159 0 chr10 76267343 76267488 -64049277 + AluJo SINE Alu 120 287 -25 2468 81 0 0 chr10 76267553 76267860 -64048905 - AluY SINE Alu -4 307 1 1922 49 4 0 chr10 76268198 76268442 -64048323 - L1PA4 LINE L1 -1 6154 5910 1674 16 0 0 chr10 76268444 76268637 -64048128 + L1PA4 LINE L1 5708 5900 -255 684 243 0 0 chr10 76268735 76268875 -64047890 - FRAM SINE Alu -24 152 13 1598 190 3 14 chr10 76269766 76270055 -64046710 - AluJb SINE Alu -26 286 1 567 273 107 46 chr10 76270193 76270604 -64046161 - HAL1b LINE L1 -457 891 456 630 230 0 14 chr10 76270617 76270756 -64046009 - FLAM_C SINE Alu -6 137 1 1409 218 3 13 chr10 76270771 76271069 -64045696 - AluJo SINE Alu -16 296 2 398 316 97 15 chr10 76271142 76271338 -64045427 + L2 LINE L2 3100 3311 -2 1652 168 18 3 chr10 76271557 76271842 -64044923 - AluJb SINE Alu -23 289 1 221 167 0 0 chr10 76271928 76271970 -64044795 + T-rich Low_complexity Low_complexity 1 42 0 27 29 0 0 chr10 76272460 76272494 -64044271 + AT_rich Low_complexity Low_complexity 1 34 0 328 295 119 0 chr10 76272547 76272757 -64044008 - HAL1b LINE L1 -714 634 400 1016 176 0 27 chr10 76272759 76272946 -64043819 - AluJo SINE Alu 0 312 131 709 177 0 23 chr10 76272994 76273124 -64043641 - AluJo SINE Alu -183 129 3 284 227 27 0 chr10 76273175 76273250 -64043515 - HAL1b LINE L1 -966 382 306 457 297 96 42 chr10 76273370 76273609 -64043156 - HAL1b LINE L1 -1084 264 13 2077 142 134 8 chr10 76274641 76275021 -64041744 - MSTA LTR MaLR 0 428 1 7868 198 38 2 chr10 76275021 76276615 -64040150 - MSTA-int LTR MaLR 0 1651 1 1490 142 132 12 chr10 76276616 76276973 -64039792 - MSTA LTR MaLR -1 427 1 26 0 0 0 chr10 76276981 76277007 -64039758 + AT_rich Low_complexity Low_complexity 1 26 0 1102 307 93 11 chr10 76277024 76277857 -64038908 + L1M4 LINE L1 4511 5419 -743 1012 152 0 0 chr10 76277857 76278042 -64038723 + FRAM SINE Alu 1 181 0 287 230 60 0 chr10 76278053 76278172 -64038593 + L1M2 LINE L1 5410 5536 -628 697 279 61 38 chr10 76278235 76278550 -64038215 + L1M4 LINE L1 4409 4738 -1408 1875 144 24 45 chr10 76278550 76278932 -64037833 + THE1C LTR MaLR 1 374 -1 697 279 61 38 chr10 76278932 76279042 -64037723 + L1M4 LINE L1 4738 4844 -1302 331 242 117 47 chr10 76279198 76279326 -64037439 + MIR SINE MIR 49 185 -77 21 82 0 0 chr10 76279954 76280003 -64036762 + AT_rich Low_complexity Low_complexity 1 49 0 792 248 76 32 chr10 76280480 76280794 -64035971 + L1MC4 LINE L1 7353 7680 -362 288 0 0 0 chr10 76280907 76280939 -64035826 + (TG)n Simple_repeat Simple_repeat 2 33 0 758 271 5 20 chr10 76281378 76281577 -64035188 + MIR SINE MIR 41 236 -26 231 283 0 0 chr10 76283709 76283762 -64033003 + L2 LINE L2 3219 3271 -1 614 250 0 29 chr10 76283803 76283939 -64032826 - FLAM_A SINE Alu -1 132 1 276 252 130 9 chr10 76283940 76284055 -64032710 - L1MC4 LINE L1 -26 8009 7807 182 287 58 35 chr10 76284372 76284459 -64032306 + MIR SINE MIR 11 99 -163 1222 213 125 16 chr10 76284490 76284865 -64031900 - L1MC4 LINE L1 0 8042 7627 733 175 0 0 chr10 76284872 76284992 -64031773 + FLAM_A SINE Alu 20 139 -3 1637 219 75 11 chr10 76285174 76285613 -64031152 - L1MC4 LINE L1 -455 7587 7121 893 164 0 33 chr10 76285700 76285879 -64030886 - FRAM SINE Alu 0 174 1 19295 25 5 0 chr10 76286315 76289413 -64027352 + L1PA4 LINE L1 3058 6150 -5 25 0 0 0 chr10 76289507 76289532 -64027233 + AT_rich Low_complexity Low_complexity 1 25 0 1460 93 0 0 chr10 76289552 76289746 -64027019 + MER41B LTR ERV1 442 635 0 1227 181 0 13 chr10 76289925 76290157 -64026608 + MER30 DNA MER1_type 2 230 0 2490 51 0 0 chr10 76290195 76290488 -64026277 + AluY SINE Alu 1 293 -18 308 285 93 40 chr10 76290687 76290838 -64025927 + MIR SINE MIR 2 160 -48 652 226 110 7 chr10 76291210 76291356 -64025409 - MER5A DNA MER1_type -27 162 2 1816 170 40 10 chr10 76292375 76292747 -64024018 + L1MB5 LINE L1 5724 6101 -73 345 374 26 36 chr10 76292805 76293000 -64023765 - MIR3 SINE MIR -8 200 8 28 29 0 0 chr10 76293311 76293346 -64023419 + AT_rich Low_complexity Low_complexity 1 35 0 201 308 11 0 chr10 76293783 76293874 -64022891 + T-rich Low_complexity Low_complexity 4 95 0 544 217 50 0 chr10 76293888 76294008 -64022757 + MER58B DNA MER1_type 216 341 0 184 375 48 52 chr10 76294030 76294281 -64022484 - L2 LINE L2 -340 2974 2725 513 285 36 10 chr10 76294872 76295149 -64021616 + MER119 DNA MER1_type 1 355 -228 1262 169 22 13 chr10 76295149 76295380 -64021385 - Tigger2 DNA MER2_type 0 2718 2486 1935 158 41 19 chr10 76295388 76295755 -64021010 + THE1C LTR MaLR 1 375 0 * 5863 145 16 25 chr10 76295755 76296751 -64020014 - Tigger2 DNA MER2_type -253 2465 1479 6094 141 58 8 chr10 76296743 76297800 -64018965 - Tigger2 DNA MER2_type -1609 1109 1 527 214 116 56 chr10 76297801 76298016 -64018749 + MER119 DNA MER1_type 356 583 0 1894 150 10 7 chr10 76298121 76298421 -64018344 + AluJb SINE Alu 3 303 -9 533 224 168 6 chr10 76299231 76299392 -64017373 - MIR SINE MIR -10 252 66 21 0 0 0 chr10 76299710 76299731 -64017034 + AT_rich Low_complexity Low_complexity 1 21 0 779 233 6 34 chr10 76299741 76299917 -64016848 - FAM SINE Alu -4 171 1 12773 204 72 46 chr10 76299940 76299985 -64016780 - L1MA5A LINE L1 -9 6930 6888 2325 92 0 0 chr10 76299985 76300279 -64016486 - AluSc SINE Alu -15 294 1 12773 204 72 46 chr10 76300279 76301507 -64015258 - L1MA5A LINE L1 -51 6888 5693 1937 163 0 0 chr10 76301507 76301796 -64014969 - AluJb SINE Alu -23 289 1 12773 204 72 46 chr10 76301796 76305600 -64011165 - L1MA5A LINE L1 -1246 5693 1425 1287 185 0 4 chr10 76305600 76305827 -64010938 - AluJb SINE Alu 0 312 87 12773 204 72 46 chr10 76305827 76307287 -64009478 - L1MA5A LINE L1 -5514 1425 4 2079 126 13 13 chr10 76307301 76307611 -64009154 - AluSx SINE Alu -2 310 1 989 111 39 11 chr10 76307645 76307942 -64008823 - THE1A LTR MaLR 0 355 1 1862 174 0 0 chr10 76308194 76308492 -64008273 + AluJb SINE Alu 1 298 -14 509 168 180 70 chr10 76309778 76310022 -64006743 - Charlie5 DNA MER1_type 0 2622 2352 * 543 225 88 0 chr10 76310020 76310180 -64006585 - Charlie5 DNA MER1_type -2412 200 27 270 194 15 15 chr10 76310187 76310254 -64006511 - Charlie5 DNA MER1_type -2507 105 39 344 273 0 0 chr10 76310350 76310427 -64006338 - L1ME LINE L1 -439 5682 5606 1517 168 120 54 chr10 76312806 76313261 -64003504 - MER39 LTR ERV1 0 707 1 421 276 92 36 chr10 76313835 76314031 -64002734 + MIR SINE MIR 56 262 0 204 304 9 27 chr10 76314225 76314337 -64002428 + CT-rich Low_complexity Low_complexity 5 114 0 224 313 152 22 chr10 76314368 76314598 -64002167 + L2 LINE L2 2257 2516 -798 29 60 0 0 chr10 76315029 76315079 -64001686 + AT_rich Low_complexity Low_complexity 1 50 0 180 0 0 0 chr10 76315175 76315195 -64001570 + (ATTG)n Simple_repeat Simple_repeat 3 22 0 1587 202 0 0 chr10 76315198 76315480 -64001285 - AluJb SINE Alu -30 282 1 745 198 0 0 chr10 76315539 76315660 -64001105 + FLAM_A SINE Alu 1 121 -12 2143 141 0 0 chr10 76316430 76316742 -64000023 - AluSq SINE Alu -1 312 1 348 221 15 59 chr10 76316751 76316887 -63999878 - L1ME1 LINE L1 -1 6165 6036 36 70 0 0 chr10 76316928 76316999 -63999766 + AT_rich Low_complexity Low_complexity 1 71 0 2485 52 10 0 chr10 76317867 76318172 -63998593 + AluY SINE Alu 1 308 -3 4557 162 39 18 chr10 76319272 76320319 -63996446 + L1MB4 LINE L1 5107 6174 -6 191 293 85 24 chr10 76320339 76320421 -63996344 + L3 LINE CR1 218 304 -1273 222 331 157 27 chr10 76320604 76320936 -63995829 + L3 LINE CR1 477 851 -726 1660 286 27 25 chr10 76321318 76321430 -63995335 + L1ME1 LINE L1 149 259 -6137 1953 134 20 3 chr10 76321430 76321722 -63995043 + AluSx SINE Alu 1 297 -15 1660 286 27 25 chr10 76321722 76322127 -63994638 + L1ME1 LINE L1 259 667 -5729 1447 245 89 39 chr10 76322136 76322316 -63994449 + L1ME1 LINE L1 3439 3609 -2606 1665 185 7 4 chr10 76322316 76322618 -63994147 - AluJo SINE Alu 0 304 2 1447 245 89 39 chr10 76322618 76322999 -63993766 + L1ME1 LINE L1 3609 4029 -2186 1623 141 83 0 chr10 76323002 76323278 -63993487 + AluSq SINE Alu 1 299 -14 2131 214 83 38 chr10 76323305 76323405 -63993360 + L1ME1 LINE L1 4240 4334 -1881 2122 102 0 59 chr10 76323405 76323727 -63993038 + AluSx SINE Alu 1 303 -9 2131 214 83 38 chr10 76323727 76324383 -63992382 + L1ME1 LINE L1 4334 5030 -1185 * 2217 243 82 21 chr10 76324365 76325070 -63991695 + L1ME1 LINE L1 5483 6230 -5 21 36 0 0 chr10 76325715 76325743 -63991022 + AT_rich Low_complexity Low_complexity 1 28 0 1591 201 0 7 chr10 76325965 76326258 -63990507 + AluJo SINE Alu 1 291 -21 2069 130 3 19 chr10 76326367 76326674 -63990091 - AluSq SINE Alu -11 302 1 263 206 0 134 chr10 76326802 76326899 -63989866 + MIR3 SINE MIR 125 208 0 21 0 0 0 chr10 76326934 76326955 -63989810 + AT_rich Low_complexity Low_complexity 1 21 0 2667 148 37 46 chr10 76327254 76327820 -63988945 - L1MB4 LINE L1 0 6180 5620 763 199 19 0 chr10 76327820 76327966 -63988799 - L1M3 LINE L1 -598 5573 5422 2092 112 10 0 chr10 76328761 76329057 -63987708 + AluSx SINE Alu 1 299 -13 761 163 0 27 chr10 76329967 76330114 -63986651 - FLAM_C SINE Alu 0 143 1 29 28 0 0 chr10 76330929 76330965 -63985800 + AT_rich Low_complexity Low_complexity 1 36 0 34 24 0 0 chr10 76331188 76331229 -63985536 + AT_rich Low_complexity Low_complexity 1 41 0 1937 159 3 0 chr10 76331250 76331545 -63985220 - AluSx SINE Alu -16 296 1 367 239 0 87 chr10 76331717 76331789 -63984976 + L1MC4a LINE L1 7604 7660 -148 2196 125 0 0 chr10 76331789 76332101 -63984664 - AluSx SINE Alu 0 312 1 367 239 0 87 chr10 76332101 76332166 -63984599 + L1MC4a LINE L1 7660 7729 -79 848 171 141 5 chr10 76332185 76332384 -63984381 - L1MC4 LINE L1 -365 7677 7452 1207 154 16 0 chr10 76332385 76332573 -63984192 + AluJo SINE Alu 86 276 -36 490 286 68 0 chr10 76332610 76332743 -63984022 - L1MC4a LINE L1 -430 7378 7237 1448 163 0 0 chr10 76332745 76332960 -63983805 + AluJb SINE Alu 1 215 -97 903 226 73 5 chr10 76332968 76333172 -63983593 + MLT1F1 LTR MaLR 348 565 -2 463 176 92 17 chr10 76333174 76333293 -63983472 - L1MC4a LINE L1 -1410 6398 6271 1121 208 43 57 chr10 76333296 76333666 -63983099 - L1MC4a LINE L1 -1633 6175 5811 2165 92 0 0 chr10 76333667 76333986 -63982779 - AluY SINE Alu 0 319 1 649 103 0 103 chr10 76334014 76334131 -63982634 - FLAM_C SINE Alu -27 116 12 1148 265 19 3 chr10 76334136 76334445 -63982320 - L1MC4a LINE L1 -1982 5826 5513 619 283 80 11 chr10 76335033 76335220 -63981545 - MER21B LTR ERV1 -661 202 3 1966 110 48 0 chr10 76335381 76335653 -63981112 + AluSc SINE Alu 1 285 -24 305 185 0 0 chr10 76335678 76335732 -63981033 - AluSc SINE Alu 0 299 246 223 333 0 0 chr10 76335936 76336005 -63980760 - L2 LINE L2 -8 3305 3237 306 245 77 21 chr10 76337663 76337806 -63978959 - L1ME4a LINE L1 -6 6115 5965 526 192 128 18 chr10 76337975 76338165 -63978600 - L1MC4 LINE L1 -168 7827 7553 416 243 166 32 chr10 76338166 76338219 -63978546 - L1ME4a LINE L1 -181 5940 5895 270 73 0 0 chr10 76338219 76338260 -63978505 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2221 107 0 23 chr10 76338263 76338437 -63978328 - AluSc SINE Alu -6 303 127 225 0 0 0 chr10 76338437 76338462 -63978303 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2117 106 3 3 chr10 76338462 76338744 -63978021 - AluSp SINE Alu -31 282 1 2221 107 0 23 chr10 76338744 76338878 -63977887 - AluSc SINE Alu -180 129 1 416 243 166 32 chr10 76338878 76339067 -63977698 - L1ME4a LINE L1 -227 5894 5661 829 108 190 0 chr10 76339208 76339366 -63977399 + MER53 DNA DNA 2 189 0 488 236 47 0 chr10 76339498 76339604 -63977161 + L2 LINE L2 3203 3313 0 368 312 104 8 chr10 76339731 76339856 -63976909 - L2 LINE L2 -2 3270 3134 1685 180 3 10 chr10 76340222 76340522 -63976243 - AluJb SINE Alu -14 298 1 2049 137 3 0 chr10 76340892 76341192 -63975573 + AluSx SINE Alu 1 301 -11 1839 102 4 15 chr10 76341993 76342257 -63974508 + THE1B LTR MaLR 104 364 0 18403 48 0 3 chr10 76343236 76345497 -63971268 - L1P LINE L1 -3885 2261 7 2227 107 0 13 chr10 76345502 76345812 -63970953 - AluSc SINE Alu -3 306 1 191 259 35 17 chr10 76346225 76346283 -63970482 - L2 LINE L2 0 3272 3214 226 318 116 31 chr10 76346545 76346674 -63970091 - L2 LINE L2 -10 3303 3164 1398 176 8 8 chr10 76347705 76347950 -63968815 - AluJo SINE Alu -46 266 22 592 243 51 23 chr10 76348519 76348696 -63968069 + L1ME LINE L1 5530 5711 -410 22 0 0 0 chr10 76348700 76348722 -63968043 + AT_rich Low_complexity Low_complexity 1 22 0 3467 213 59 74 chr10 76348739 76349820 -63966945 - L1MC4a LINE L1 -27 7781 6717 330 209 45 104 chr10 76349818 76349868 -63966897 - L1MC4 LINE L1 -1148 6667 6616 * 246 62 0 0 chr10 76349868 76349900 -63966865 + (TG)n Simple_repeat Simple_repeat 1 32 0 330 209 45 104 chr10 76349900 76349912 -63966853 - L1MC4 LINE L1 -1199 6616 6605 1775 98 104 45 chr10 76349912 76350199 -63966566 - AluSp SINE Alu -9 304 1 330 209 45 104 chr10 76350199 76350269 -63966496 - L1MC4 LINE L1 -1210 6605 6512 707 221 23 46 chr10 76350373 76350590 -63966175 - L1MC4a LINE L1 -1623 6185 5974 1791 163 59 13 chr10 76350593 76350968 -63965797 - L1MB8 LINE L1 0 6178 5787 1746 198 35 25 chr10 76350970 76351365 -63965400 - MLT1C LTR MaLR -2 465 67 230 215 185 0 chr10 76351510 76351575 -63965190 - MLT1C LTR MaLR -382 85 9 227 167 21 0 chr10 76351583 76351631 -63965134 - L1MB8 LINE L1 -387 5791 5743 * 617 251 11 0 chr10 76351630 76351805 -63964960 - L1MC4a LINE L1 -1815 5993 5817 344 245 45 0 chr10 76352048 76352215 -63964550 - L1MC4a LINE L1 -1901 5907 5709 * 544 266 72 14 chr10 76352214 76352421 -63964344 + L1ME3A LINE L1 5701 5919 -251 1724 257 43 31 chr10 76352435 76352975 -63963790 + L1ME LINE L1 25 570 -5500 1768 66 33 52 chr10 76353007 76353278 -63963487 - AluY SINE Alu -8 303 38 365 380 68 34 chr10 76353455 76353810 -63962955 - L2 LINE L2 -368 2946 2580 387 0 0 0 chr10 76355014 76355057 -63961708 + (TG)n Simple_repeat Simple_repeat 2 44 0 703 205 25 43 chr10 76356370 76356531 -63960234 - MER58A DNA MER1_type 0 161 4 2092 116 0 0 chr10 76356875 76357152 -63959613 + AluSx SINE Alu 21 297 -15 1881 270 59 53 chr10 76357312 76358032 -63958733 + L1MEc LINE L1 37 764 -5632 2118 105 58 55 chr10 76358032 76358197 -63958568 + THE1B LTR MaLR 1 164 -200 2222 121 3 0 chr10 76358197 76358494 -63958271 + AluSq SINE Alu 1 298 -15 2118 105 58 55 chr10 76358494 76358691 -63958074 + THE1B LTR MaLR 164 364 0 1881 270 59 53 chr10 76358691 76358748 -63958017 + L1MEc LINE L1 764 819 -5577 244 218 18 18 chr10 76358775 76358830 -63957935 + AluYb8 SINE Alu 119 173 -135 1012 231 58 40 chr10 76358988 76359064 -63957701 + L1ME3 LINE L1 5677 5750 -412 2547 71 0 0 chr10 76359064 76359372 -63957393 - AluSc SINE Alu -1 308 1 1012 231 58 40 chr10 76359372 76359652 -63957113 + L1ME3 LINE L1 5750 6064 -98 26 0 0 0 chr10 76359801 76359827 -63956938 + AT_rich Low_complexity Low_complexity 1 26 0 870 140 0 22 chr10 76360536 76360672 -63956093 + AluJo SINE Alu 1 133 -169 22 56 0 19 chr10 76360858 76360888 -63955877 + AT_rich Low_complexity Low_complexity 1 31 -22 1350 142 150 0 chr10 76360888 76361135 -63955630 + AluJb SINE Alu 1 284 -18 22 56 0 19 chr10 76361135 76361158 -63955607 + AT_rich Low_complexity Low_complexity 31 53 0 898 221 0 0 chr10 76361338 76361501 -63955264 + AluJo SINE Alu 137 299 -13 1887 163 12 3 chr10 76363491 76363816 -63952949 - LTR39 LTR ERV1 -64 719 392 729 230 18 10 chr10 76363862 76364048 -63952717 - LTR39 LTR ERV1 -388 395 1 1055 160 0 22 chr10 76364055 76364236 -63952529 - FRAM SINE Alu 0 176 1 1386 201 22 26 chr10 76364265 76364578 -63952187 + THE1C LTR MaLR 64 375 0 700 190 61 6 chr10 76364601 76364764 -63952001 + MLT1D LTR MaLR 253 424 -81 266 271 150 14 chr10 76365295 76365502 -63951263 - L1MC/D LINE L1 -2015 5793 5559 256 90 144 99 chr10 76365853 76365964 -63950801 + Alu SINE Alu 209 298 -2 22 0 0 0 chr10 76366405 76366427 -63950338 + AT_rich Low_complexity Low_complexity 1 22 0 363 273 149 37 chr10 76366523 76366684 -63950081 + MIR3 SINE MIR 19 197 -11 1849 141 27 3 chr10 76367164 76367462 -63949303 + AluJo SINE Alu 3 307 -5 22 35 0 0 chr10 76367791 76367820 -63948945 + AT_rich Low_complexity Low_complexity 1 29 0 2502 69 3 0 chr10 76367914 76368218 -63948547 - AluSp SINE Alu -8 305 1 241 261 0 14 chr10 76368603 76368672 -63948093 - LTR33 LTR ERVL -453 68 1 2459 11 0 0 chr10 76369480 76369783 -63946982 + L1PA3 LINE L1 5865 6167 0 191 241 13 63 chr10 76370358 76370437 -63946328 - L2 LINE L2 -310 2962 2888 887 201 6 17 chr10 76370437 76370611 -63946154 + FAM SINE Alu 1 172 -3 213 162 0 88 chr10 76370687 76370755 -63946010 + A-rich Low_complexity Low_complexity 2 63 0 242 260 0 0 chr10 76371386 76371436 -63945329 - L2 LINE L2 -2 3311 3262 285 213 160 0 chr10 76371537 76371612 -63945153 + L2 LINE L2 3186 3272 0 358 241 23 53 chr10 76371806 76371997 -63944768 + MLT2F LTR ERVL 272 663 0 1627 148 53 25 chr10 76373445 76373728 -63943037 + AluJb SINE Alu 1 291 -21 293 180 0 0 chr10 76374119 76374169 -63942596 + FLAM SINE Alu 67 116 -17 306 0 0 0 chr10 76374187 76374221 -63942544 + (CA)n Simple_repeat Simple_repeat 2 35 0 1835 265 93 17 chr10 76374230 76374845 -63941920 + L1MEc LINE L1 817 1511 -4885 180 0 0 0 chr10 76374845 76374865 -63941900 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1835 265 93 17 chr10 76374865 76375065 -63941700 + L1MEc LINE L1 1511 1694 -4702 402 264 83 28 chr10 76375068 76375212 -63941553 + MIR SINE MIR 40 191 -71 1256 157 62 5 chr10 76375289 76375499 -63941266 + AluJb SINE Alu 84 305 -7 723 148 0 0 chr10 76376742 76376850 -63939915 - FLAM_C SINE Alu -35 108 1 780 244 234 34 chr10 76376923 76377332 -63939433 - MLT1F1 LTR MaLR -84 483 1 549 333 62 0 chr10 76377444 76377636 -63939129 - MIR SINE MIR -54 208 5 21 57 0 0 chr10 76377695 76377730 -63939035 + AT_rich Low_complexity Low_complexity 1 35 0 266 148 19 19 chr10 76377999 76378053 -63938712 + L1M4 LINE L1 4306 4359 -1787 24 0 0 0 chr10 76379712 76379736 -63937029 + AT_rich Low_complexity Low_complexity 1 24 0 2094 128 3 3 chr10 76379737 76380035 -63936730 + AluSq SINE Alu 1 298 -15 309 197 0 0 chr10 76380035 76380101 -63936664 + (CATATA)n Simple_repeat Simple_repeat 5 70 0 281 264 182 16 chr10 76381225 76381564 -63935201 - L1MC5 LINE L1 -49 7970 7612 389 279 49 24 chr10 76381570 76382098 -63934667 - L1MC5 LINE L1 -492 7495 7102 23 33 0 0 chr10 76385731 76385761 -63931004 + AT_rich Low_complexity Low_complexity 1 30 0 541 121 0 0 chr10 76385929 76386012 -63930753 - MER3 DNA MER1_type -1 208 126 280 86 0 0 chr10 76386011 76386046 -63930719 + U2 snRNA snRNA 1 35 -153 * 659 218 14 14 chr10 76386032 76386179 -63930586 - MER3 DNA MER1_type -58 151 5 290 293 13 0 chr10 76386462 76386537 -63930228 - L2 LINE L2 0 3272 3197 304 295 70 54 chr10 76386671 76386800 -63929965 - L2 LINE L2 -309 2963 2833 1456 72 0 0 chr10 76386989 76387182 -63929583 - L1P3 LINE L1 -377 5777 5585 2424 77 9 0 chr10 76387183 76387508 -63929257 + L1PA7 LINE L1 5825 6152 -2 506 266 63 42 chr10 76387555 76387857 -63928908 + L1M4c LINE L1 2219 2569 -3884 230 318 78 54 chr10 76387903 76388056 -63928709 - MIR SINE MIR 0 262 99 2202 105 3 10 chr10 76388056 76388362 -63928403 + AluSq SINE Alu 1 304 -9 230 318 78 54 chr10 76388362 76388450 -63928315 - MIR SINE MIR -163 99 15 198 0 0 0 chr10 76388536 76388558 -63928207 + (T)n Simple_repeat Simple_repeat 1 22 0 642 194 88 32 chr10 76388680 76388896 -63927869 - L1M4 LINE L1 -755 5391 5164 630 220 63 13 chr10 76388889 76389097 -63927668 - L1MB7 LINE L1 -5 6179 5953 * 229 191 254 0 chr10 76389402 76389465 -63927300 - MER2 DNA MER2_type 0 345 267 23 0 0 0 chr10 76389470 76389493 -63927272 + AT_rich Low_complexity Low_complexity 1 23 0 1084 167 10 29 chr10 76389505 76389709 -63927056 - MER2 DNA MER2_type -145 200 1 724 235 129 60 chr10 76389913 76390015 -63926750 - L1M4 LINE L1 -928 5218 5124 791 61 0 0 chr10 76390015 76390113 -63926652 - HY3 scRNA scRNA -1 100 3 724 235 129 60 chr10 76390113 76390444 -63926321 - L1M4 LINE L1 -1022 5124 4755 615 147 0 154 chr10 76390500 76390643 -63926122 + FLAM_A SINE Alu 1 121 -12 24 67 0 0 chr10 76390705 76390750 -63926015 + AT_rich Low_complexity Low_complexity 1 45 0 551 290 0 25 chr10 76390966 76391128 -63925637 - L2 LINE L2 -648 2666 2509 2389 99 0 0 chr10 76391136 76391438 -63925327 + AluSq SINE Alu 1 302 -11 626 221 72 11 chr10 76391615 76391796 -63924969 + MIR SINE MIR 2 193 -69 511 200 22 0 chr10 76391826 76391916 -63924849 - AluSg/x SINE Alu -26 286 195 284 114 0 0 chr10 76391916 76391960 -63924805 + L1 LINE L1 4575 4618 -1528 1934 145 0 3 chr10 76391973 76392263 -63924502 - AluJb SINE Alu -18 294 6 338 186 43 0 chr10 76392301 76392371 -63924394 + MIR SINE MIR 120 192 -70 2740 159 95 22 chr10 76392670 76393294 -63923471 - L1MC4a LINE L1 0 7808 7140 665 159 58 0 chr10 76393309 76393447 -63923318 - L1MC4a LINE L1 -522 7286 7141 321 271 35 0 chr10 76393477 76393562 -63923203 - MIR SINE MIR -112 150 63 1990 125 0 4 chr10 76393965 76394237 -63922528 - AluSc SINE Alu -27 282 12 777 231 49 46 chr10 76395447 76395754 -63921011 + L1MC5 LINE L1 7605 7912 -49 40 59 0 0 chr10 76396069 76396137 -63920628 + AT_rich Low_complexity Low_complexity 1 68 0 24 32 0 0 chr10 76396882 76396913 -63919852 + AT_rich Low_complexity Low_complexity 1 31 0 472 241 31 31 chr10 76397015 76397177 -63919588 + L1MC5 LINE L1 7763 7924 -37 1761 160 6 44 chr10 76397314 76397632 -63919133 + AluJo SINE Alu 5 310 -2 31231 93 12 16 chr10 76398760 76405201 -63911564 - L1PA7 LINE L1 -1 6468 1 21 36 0 0 chr10 76405332 76405360 -63911405 + AT_rich Low_complexity Low_complexity 1 28 0 2968 154 21 2 chr10 76405550 76406082 -63910683 + L1MB3 LINE L1 5626 6167 -16 1639 181 13 35 chr10 76406524 76406834 -63909931 - AluJb SINE Alu -9 303 1 3477 156 25 7 chr10 76406988 76407780 -63908985 - L1PA16 LINE L1 0 6165 5343 762 168 15 15 chr10 76407789 76407920 -63908845 - FLAM_C SINE Alu -12 131 1 2882 201 13 3 chr10 76407920 76408608 -63908157 - L1 LINE L1 -781 5365 4671 569 251 162 8 chr10 76409918 76410153 -63906612 - L1ME3A LINE L1 -8 6162 5892 2147 255 94 17 chr10 76410159 76410966 -63905799 - L1MC4 LINE L1 -1112 7725 6857 2564 253 79 53 chr10 76410996 76411185 -63905580 - L1MC4 LINE L1 -610 6355 6172 2181 98 0 0 chr10 76411185 76411508 -63905257 - AluSx SINE Alu 0 323 1 2564 253 79 53 chr10 76411508 76413078 -63903687 - L1MC4 LINE L1 -793 6172 4553 1753 166 17 3 chr10 76413090 76413386 -63903379 - AluJo SINE Alu -7 305 6 761 177 126 5 chr10 76413390 76413605 -63903160 - L1MC4 LINE L1 -3656 3285 3045 461 292 70 6 chr10 76413613 76413784 -63902981 - L1MC4 LINE L1 -4076 3046 2865 1934 141 30 10 chr10 76413784 76414088 -63902677 - AluSx SINE Alu -2 310 1 447 269 102 32 chr10 76414088 76414512 -63902253 - L1MC4 LINE L1 -4715 2407 2014 423 0 0 0 chr10 76414512 76414559 -63902206 + (TG)n Simple_repeat Simple_repeat 2 48 0 447 269 102 32 chr10 76414559 76414672 -63902093 - L1MC4 LINE L1 -5108 2014 1910 2166 118 0 0 chr10 76414672 76414968 -63901797 + AluSx SINE Alu 1 296 -16 447 269 102 32 chr10 76414968 76415157 -63901608 - L1MC4 LINE L1 -5212 1910 1388 5373 129 54 45 chr10 76415163 76415226 -63901539 - L1MA5A LINE L1 -2 6295 6234 1684 156 7 37 chr10 76415226 76415521 -63901244 - AluJo SINE Alu -26 286 1 5373 129 54 45 chr10 76415521 76417164 -63899601 - L1MA5A LINE L1 -63 6234 4558 22 0 0 0 chr10 76417920 76417942 -63898823 + AT_rich Low_complexity Low_complexity 1 22 0 196 252 58 126 chr10 76418160 76418225 -63898540 - MIR SINE MIR -98 110 53 1890 135 16 10 chr10 76418225 76418536 -63898229 + AluSp SINE Alu 1 313 0 196 252 58 126 chr10 76418536 76418573 -63898192 - MIR SINE MIR -155 53 15 643 195 0 77 chr10 76418637 76418806 -63897959 + MER20 DNA MER1_type 64 219 0 253 145 32 0 chr10 76419172 76419234 -63897531 + (TA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr10 76419841 76419862 -63896903 + AT_rich Low_complexity Low_complexity 1 21 0 439 191 191 26 chr10 76420177 76420292 -63896473 + MER94 DNA DNA 1 134 0 221 271 200 0 chr10 76420545 76420615 -63896150 - L2 LINE L2 -20 3293 3210 220 403 0 0 chr10 76420702 76420779 -63895986 - L2 LINE L2 -215 3057 2981 2155 110 10 10 chr10 76421801 76422101 -63894664 - AluSx SINE Alu -12 300 1 1795 141 14 25 chr10 76422704 76422987 -63893778 + AluJo SINE Alu 13 292 -20 1999 141 0 28 chr10 76423115 76423435 -63893330 - AluSx SINE Alu -1 311 1 539 273 84 25 chr10 76424176 76424414 -63892351 - AluJo SINE Alu -36 276 25 236 149 0 21 chr10 76424628 76424675 -63892090 + Alu SINE Alu 245 290 -10 1026 284 58 11 chr10 76424680 76425144 -63891621 + L1M4c LINE L1 1199 1684 -4700 270 93 19 56 chr10 76425137 76425191 -63891574 + L1ME3A LINE L1 5892 5943 -227 * 334 241 112 12 chr10 76425247 76425395 -63891370 - MLT1H LTR MaLR -21 528 370 1696 170 3 27 chr10 76425521 76425821 -63890944 + AluJo SINE Alu 1 293 -19 511 397 65 18 chr10 76425909 76426249 -63890516 - L2 LINE L2 -405 2909 2554 190 326 0 0 chr10 76426762 76426811 -63889954 - L2 LINE L2 -842 2472 2424 551 213 58 13 chr10 76427505 76427703 -63889062 + L1MA10 LINE L1 5962 6326 -5 1570 187 22 4 chr10 76428099 76428377 -63888388 + AluJo SINE Alu 1 283 -29 2008 161 0 13 chr10 76428512 76428828 -63887937 - AluJb SINE Alu 0 312 1 276 277 98 0 chr10 76429008 76429120 -63887645 + L1ME LINE L1 5600 5722 -399 2024 113 3 67 chr10 76429274 76429603 -63887162 + AluSx SINE Alu 1 308 -4 312 309 12 0 chr10 76430220 76430304 -63886461 + MIR3 SINE MIR 105 189 -19 1098 207 42 0 chr10 76430320 76430533 -63886232 - MER58A DNA MER1_type 0 224 3 663 162 94 0 chr10 76430955 76431072 -63885693 + FLAM_C SINE Alu 1 128 -5 34 0 0 0 chr10 76431076 76431110 -63885655 + AT_rich Low_complexity Low_complexity 1 34 0 1192 166 148 17 chr10 76431619 76432041 -63884724 + Charlie1b DNA MER1_type 1 478 -45 879 127 0 63 chr10 76432082 76432224 -63884541 - FLAM_C SINE Alu 0 133 1 244 113 57 38 chr10 76432359 76432412 -63884353 - HAL1b LINE L1 -92 1256 1203 2053 151 0 25 chr10 76432544 76432861 -63883904 - AluJo SINE Alu -3 309 1 391 298 262 27 chr10 76432863 76433088 -63883677 - L3 LINE CR1 -5 1572 1295 434 208 0 5 chr10 76433093 76433217 -63883548 - L1MEd LINE L1 -5081 1038 938 1663 172 23 10 chr10 76434246 76434549 -63882216 - AluJo SINE Alu -5 307 1 204 125 0 0 chr10 76437798 76437830 -63878935 + (TA)n Simple_repeat Simple_repeat 1 32 0 1165 179 48 12 chr10 76437842 76438094 -63878671 + L1M4c LINE L1 1611 1871 -4513 2350 91 0 0 chr10 76438117 76438413 -63878352 + AluSc SINE Alu 1 296 -13 568 215 63 0 chr10 76438420 76438611 -63878154 + L1M4c LINE L1 2002 2204 -4180 1776 121 24 97 chr10 76438623 76438962 -63877803 + AluYb8 SINE Alu 5 318 0 1780 181 7 3 chr10 76439063 76439361 -63877404 + AluJb SINE Alu 1 299 -13 1977 131 25 0 chr10 76439857 76440139 -63876626 + AluSx SINE Alu 1 289 -23 242 346 51 0 chr10 76440523 76440601 -63876164 + MER91C DNA MER1_type 29 110 -30 635 228 143 32 chr10 76441330 76441519 -63875246 + MER63A DNA MER1_type 1 210 0 648 219 8 105 chr10 76441520 76441758 -63875007 + L1ME2 LINE L1 5810 6024 -140 1823 154 26 10 chr10 76441758 76442063 -63874702 - AluSq SINE Alu -3 310 1 2187 121 3 0 chr10 76442684 76442982 -63873783 + AluSx SINE Alu 1 299 -13 613 278 44 11 chr10 76443005 76443185 -63873580 + MER63A DNA MER1_type 6 191 -19 2102 129 0 0 chr10 76443375 76443662 -63873103 + AluSx SINE Alu 1 287 -25 2126 121 0 16 chr10 76444734 76445041 -63871724 + AluSq SINE Alu 1 302 -11 729 217 100 38 chr10 76446749 76446989 -63869776 + MIR SINE MIR 2 256 -6 1300 172 36 127 chr10 76447064 76447395 -63869370 - AluJo SINE Alu -1 301 1 372 340 106 14 chr10 76447882 76448023 -63868742 - L2 LINE L2 -4 3268 3115 218 246 87 43 chr10 76448322 76448391 -63868374 - L2 LINE L2 -556 2758 2687 307 253 38 0 chr10 76448391 76448470 -63868295 - L2 LINE L2 -5 3308 3227 1625 174 27 17 chr10 76448635 76448934 -63867831 - AluJo SINE Alu -10 302 1 189 107 0 0 chr10 76449085 76449113 -63867652 + (CA)n Simple_repeat Simple_repeat 2 29 0 1863 151 7 14 chr10 76449139 76449430 -63867335 + AluJo SINE Alu 1 289 -23 2958 73 80 9 chr10 76449762 76450185 -63866580 - MLT2A2 LTR ERVL 0 453 1 707 212 126 45 chr10 76450234 76450336 -63866429 - MIR SINE MIR -20 242 150 1671 203 0 10 chr10 76450336 76450637 -63866128 - AluJb SINE Alu -14 298 1 707 212 126 45 chr10 76450637 76450661 -63866104 - MIR SINE MIR -112 150 129 2054 136 27 0 chr10 76450661 76450955 -63865810 + AluJb SINE Alu 1 302 -10 2340 106 0 0 chr10 76450957 76451258 -63865507 + AluSg SINE Alu 1 301 -9 707 212 126 45 chr10 76451258 76451349 -63865416 - MIR SINE MIR -133 129 3 374 286 94 13 chr10 76451563 76451713 -63865052 + MIR SINE MIR 59 224 -38 202 309 41 72 chr10 76452062 76452159 -63864606 + L2 LINE L2 3134 3227 -45 243 347 41 47 chr10 76452307 76452477 -63864288 - MIR SINE MIR -73 189 21 * 1115 300 60 60 chr10 76452373 76452495 -63864270 + L2 LINE L2 2577 2697 -616 1850 172 0 0 chr10 76452495 76452785 -63863980 - AluJo SINE Alu -21 291 2 1115 300 60 60 chr10 76452785 76453152 -63863613 + L2 LINE L2 2697 3062 -251 1734 157 13 33 chr10 76453152 76453452 -63863313 + AluSx SINE Alu 1 294 -18 195 42 0 0 chr10 76453454 76453478 -63863287 + (TA)n Simple_repeat Simple_repeat 2 25 0 1115 300 60 60 chr10 76453478 76453642 -63863123 + L2 LINE L2 3062 3308 -5 944 259 104 40 chr10 76454296 76454748 -63862017 + L1MC4a LINE L1 5701 6181 -1627 2224 113 3 0 chr10 76454766 76455059 -63861706 + AluSx SINE Alu 1 294 -18 902 261 71 32 chr10 76455059 76455439 -63861326 + L1MC4 LINE L1 7644 8038 -4 1577 182 33 7 chr10 76455665 76455940 -63860825 + AluJo SINE Alu 1 282 -30 463 173 18 0 chr10 76455942 76456052 -63860713 + GA-rich Low_complexity Low_complexity 1 112 0 2275 113 7 0 chr10 76457036 76457336 -63859429 - AluSx SINE Alu -10 302 1 2003 133 7 13 chr10 76457736 76458038 -63858727 - AluSg SINE Alu -10 300 1 2125 114 14 0 chr10 76458661 76458950 -63857815 + AluSx SINE Alu 1 293 -19 1511 170 37 50 chr10 76458955 76459255 -63857510 + AluJo SINE Alu 1 296 -16 24 0 0 0 chr10 76459942 76459966 -63856799 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 76461235 76461259 -63855506 + AT_rich Low_complexity Low_complexity 1 24 0 1245 133 0 0 chr10 76461437 76461618 -63855147 - AluSg/x SINE Alu -49 263 83 826 240 18 50 chr10 76462385 76462606 -63854159 - MER58C DNA MER1_type 0 215 2 997 257 19 16 chr10 76462924 76463181 -63853584 - MIR SINE MIR -3 259 2 1802 203 95 95 chr10 76463660 76464405 -63852360 - LTR1B LTR ERV1 -81 745 1 1276 159 0 5 chr10 76464554 76464743 -63852022 + AluSx SINE Alu 1 188 -124 258 117 44 0 chr10 76464748 76464800 -63851965 + L1 LINE L1 4972 5025 -1121 2083 129 0 0 chr10 76464802 76465089 -63851676 + AluSx SINE Alu 1 287 -25 186 71 0 0 chr10 76465089 76465117 -63851648 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr10 76465546 76465567 -63851198 + (TTAAA)n Simple_repeat Simple_repeat 2 22 0 2290 128 0 0 chr10 76466320 76466632 -63850133 - AluSx SINE Alu 0 312 1 1414 142 96 17 chr10 76466697 76466937 -63849828 - AluJo SINE Alu -30 282 24 1954 154 0 0 chr10 76467165 76467463 -63849302 + AluJb SINE Alu 1 298 -14 1731 159 0 41 chr10 76468048 76468363 -63848402 + AluJb SINE Alu 1 302 -10 631 216 7 22 chr10 76469122 76469261 -63847504 - MLT1H LTR MaLR 0 549 413 394 258 144 0 chr10 76469267 76469364 -63847401 - MIR SINE MIR -149 113 3 2105 125 13 0 chr10 76469882 76470185 -63846580 + AluSx SINE Alu 1 307 -5 2563 53 0 3 chr10 76470235 76470536 -63846229 + AluY SINE Alu 1 300 -11 303 302 47 51 chr10 76470556 76470771 -63845994 + L1ME4a LINE L1 5900 6113 -8 21 36 0 0 chr10 76471482 76471510 -63845255 + AT_rich Low_complexity Low_complexity 1 28 0 320 292 83 17 chr10 76471595 76471715 -63845050 - MIR3 SINE MIR -45 163 36 2125 114 7 20 chr10 76471766 76472072 -63844693 + AluSx SINE Alu 1 302 -10 2262 125 0 0 chr10 76472764 76473076 -63843689 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 76473149 76473171 -63843594 + AT_rich Low_complexity Low_complexity 1 22 0 1955 167 0 3 chr10 76474691 76474991 -63841774 + AluJb SINE Alu 1 299 -13 2237 103 3 3 chr10 76476153 76476463 -63840302 - AluY SINE Alu -1 310 1 1114 191 169 31 chr10 76476513 76476832 -63839933 + MLT1A1 LTR MaLR 1 363 -2 2216 100 3 7 chr10 76476869 76477178 -63839587 - AluSc SINE Alu -1 308 1 638 211 58 13 chr10 76477178 76477334 -63839431 + MIR SINE MIR 99 261 -1 923 324 102 17 chr10 76477889 76478652 -63838113 + L2 LINE L2 2437 3313 0 1368 217 0 4 chr10 76478835 76479098 -63837667 + AluJb SINE Alu 1 262 -50 2324 65 11 0 chr10 76479177 76479490 -63837275 + AluY SINE Alu 5 320 0 734 196 184 0 chr10 76480081 76480239 -63836526 - MER5A DNA MER1_type -1 188 2 207 390 42 30 chr10 76480239 76480415 -63836350 + L2 LINE L2 2601 2782 -532 1814 172 0 3 chr10 76480415 76480705 -63836060 + AluJb SINE Alu 1 289 -23 207 390 42 30 chr10 76480705 76480758 -63836007 + L2 LINE L2 2782 2833 -481 222 344 248 14 chr10 76480870 76481088 -63835677 + L2 LINE L2 3004 3272 0 4576 154 27 34 chr10 76482077 76482399 -63834366 + L1MC2 LINE L1 5501 5824 -520 2368 115 0 0 chr10 76482399 76482712 -63834053 + AluSq SINE Alu 1 313 0 4576 154 27 34 chr10 76482712 76482812 -63833953 + L1MC2 LINE L1 5824 5923 -421 1840 148 119 0 chr10 76482812 76483123 -63833642 + MER7A DNA MER2_type 1 346 0 4576 154 27 34 chr10 76483123 76483547 -63833218 + L1MC2 LINE L1 5923 6342 -2 216 0 0 0 chr10 76484350 76484374 -63832391 + (T)n Simple_repeat Simple_repeat 1 24 0 822 154 7 29 chr10 76484472 76484608 -63832157 + FLAM_C SINE Alu 1 133 0 1972 153 3 3 chr10 76484854 76485155 -63831610 - AluJo SINE Alu -11 301 1 849 260 191 18 chr10 76485155 76485762 -63831003 - L1M4 LINE L1 -979 5167 4456 388 136 49 0 chr10 76485834 76485915 -63830850 + (TATG)n Simple_repeat Simple_repeat 2 86 0 383 38 19 0 chr10 76485979 76486032 -63830733 + (TG)n Simple_repeat Simple_repeat 1 54 0 1619 192 0 14 chr10 76486032 76486313 -63830452 - AluJb SINE Alu -35 277 1 2144 144 0 0 chr10 76486389 76486694 -63830071 - AluSx SINE Alu -7 305 1 2331 87 6 16 chr10 76486697 76487043 -63829722 - AluY SINE Alu 0 343 1 256 291 10 0 chr10 76487057 76487160 -63829605 + L1ME4a LINE L1 6018 6121 0 1428 152 9 0 chr10 76487630 76487841 -63828924 + AluJo SINE Alu 1 213 -99 1604 171 3 21 chr10 76488922 76489232 -63827533 - AluJb SINE Alu 0 305 1 1497 170 62 38 chr10 76489234 76489522 -63827243 - AluJb SINE Alu -7 295 1 180 0 0 0 chr10 76489522 76489542 -63827223 + (T)n Simple_repeat Simple_repeat 1 20 0 2007 111 29 0 chr10 76489769 76490048 -63826717 + AluSx SINE Alu 1 287 -25 4219 218 85 92 chr10 76490063 76490639 -63826126 + L1MC4a LINE L1 5282 5860 -1948 2246 83 0 0 chr10 76490639 76490916 -63825849 - AluSx SINE Alu -35 277 1 4219 218 85 92 chr10 76490916 76492026 -63824739 + L1MC4a LINE L1 5860 6957 -851 1043 228 21 16 chr10 76492036 76492229 -63824536 + AluSp SINE Alu 1 194 -119 1259 138 11 0 chr10 76492389 76492570 -63824195 - AluSx SINE Alu -129 183 1 266 265 0 61 chr10 76492643 76492741 -63824024 + L2 LINE L2 3222 3313 0 2381 179 10 10 chr10 76492746 76493148 -63823617 + MER57A LTR ERV1 2 403 0 2130 104 0 7 chr10 76493300 76493588 -63823177 - AluSx SINE Alu -26 286 1 570 162 45 65 chr10 76493613 76493767 -63822998 + L1MA9 LINE L1 6035 6185 -127 3422 167 124 34 chr10 76493771 76494482 -63822283 - MER21B LTR ERV1 0 863 89 1041 171 0 0 chr10 76494491 76494655 -63822110 + FRAM SINE Alu 1 162 -14 340 211 0 0 chr10 76494661 76494718 -63822047 - MER21B LTR ERV1 -781 82 26 664 121 0 10 chr10 76494718 76494817 -63821948 + MER4A LTR ERV1 1 98 -566 1806 124 156 87 chr10 76494817 76495195 -63821570 + MER4A LTR ERV1 261 664 0 2688 106 115 53 chr10 76495198 76495715 -63821050 + MER4A-int LTR ERV1 1 641 -5957 2214 127 0 9 chr10 76495715 76496030 -63820735 - AluSx SINE Alu 0 312 1 2688 106 115 53 chr10 76496030 76496080 -63820685 + MER4A-int LTR ERV1 641 686 -5912 3510 126 86 0 chr10 76496105 76496615 -63820150 - MER41C LTR ERV1 0 554 1 1463 110 38 0 chr10 76496615 76496824 -63819941 - MER41C-int LTR ERV1 0 7756 7540 * 8416 72 30 19 chr10 76496816 76497168 -63819597 - MER41C-int LTR ERV1 -1486 6270 5924 2342 112 0 0 chr10 76497168 76497472 -63819293 - AluSq SINE Alu -9 304 1 8416 72 30 19 chr10 76497472 76498233 -63818532 - MER41C-int LTR ERV1 -1832 5924 5144 1721 70 0 54 chr10 76498237 76498423 -63818342 - MER41C-int LTR ERV1 -3134 4622 4450 2133 118 14 0 chr10 76498423 76498733 -63818032 - AluSq SINE Alu 0 313 1 1721 70 0 54 chr10 76498733 76498788 -63817977 - MER41C-int LTR ERV1 -3306 4450 4394 * 16119 92 41 28 chr10 76498783 76499039 -63817726 - MER41C-int LTR ERV1 -4701 3055 2804 2446 75 0 7 chr10 76499039 76499345 -63817420 - AluSc SINE Alu -5 304 1 16119 92 41 28 chr10 76499345 76500104 -63816661 - MER41C-int LTR ERV1 -4952 2804 2056 3649 114 50 60 chr10 76500104 76500724 -63816041 - LTR18B LTR ERVL 0 614 1 16119 92 41 28 chr10 76500724 76501567 -63815198 - MER41C-int LTR ERV1 -5700 2056 1157 2337 109 0 0 chr10 76501567 76501869 -63814896 + AluSp SINE Alu 3 304 -9 16119 92 41 28 chr10 76501869 76502387 -63814378 - MER41C-int LTR ERV1 -6599 1157 647 3669 87 51 0 chr10 76502382 76502875 -63813890 - MER41C-int LTR ERV1 -7238 518 1 * 253 135 365 14 chr10 76502884 76502958 -63813807 - MER41C-int LTR ERV1 -5844 102 3 1760 144 99 19 chr10 76502960 76503221 -63813544 - MER41C LTR ERV1 0 554 263 2171 123 0 7 chr10 76503221 76503521 -63813244 - AluSg SINE Alu -12 298 1 1760 144 99 19 chr10 76503521 76503571 -63813194 - MER41C LTR ERV1 -291 263 218 10126 92 44 22 chr10 76503571 76505101 -63811664 + MER4A-int LTR ERV1 5033 6596 -2 690 111 0 10 chr10 76505110 76505209 -63811556 + MER4A LTR ERV1 1 98 -566 2005 111 8 43 chr10 76505209 76505566 -63811199 + MER4A LTR ERV1 261 664 0 381 143 0 0 chr10 76505599 76505662 -63811103 + L1MA9 LINE L1 6181 6243 -69 2306 163 100 83 chr10 76505662 76506093 -63810672 - LTR8A LTR ERV1 0 727 305 2161 131 7 0 chr10 76506093 76506391 -63810374 + AluSx SINE Alu 1 300 -12 1629 191 7 13 chr10 76506397 76506700 -63810065 + AluJo SINE Alu 1 301 -11 2238 110 0 0 chr10 76506702 76506993 -63809772 + AluSg SINE Alu 1 291 -19 2306 163 100 83 chr10 76506993 76507129 -63809636 - LTR8A LTR ERV1 -426 301 140 1620 175 0 27 chr10 76507131 76507452 -63809313 + AluJb SINE Alu 1 313 0 1479 155 15 103 chr10 76507455 76507796 -63808969 + AluJb SINE Alu 1 311 -1 1150 201 137 0 chr10 76507796 76508045 -63808720 + AluJo SINE Alu 1 283 -19 29 28 0 0 chr10 76508045 76508081 -63808684 + AT_rich Low_complexity Low_complexity 1 36 0 1469 185 45 35 chr10 76508081 76508183 -63808582 + AluJo SINE Alu 1 100 -212 2958 166 90 51 chr10 76508183 76508883 -63807882 + LTR8A LTR ERV1 1 727 0 1469 185 45 35 chr10 76508883 76509066 -63807699 + AluJo SINE Alu 100 289 -23 44 0 0 0 chr10 76509067 76509111 -63807654 + AT_rich Low_complexity Low_complexity 1 44 0 2358 83 0 20 chr10 76509111 76509411 -63807354 + AluSp SINE Alu 1 294 -19 2090 121 3 7 chr10 76509459 76509773 -63806992 - AluSp SINE Alu 0 313 1 278 154 0 19 chr10 76509775 76509827 -63806938 + MER113 DNA MER1_type? 135 185 -336 2930 114 19 7 chr10 76510060 76510489 -63806276 + MER57B LTR ERV1 1 434 0 2086 124 24 3 chr10 76510673 76510964 -63805801 - AluSx SINE Alu -15 297 1 1846 123 22 66 chr10 76511860 76512178 -63804587 + AluJo SINE Alu 1 304 -8 322 259 0 0 chr10 76512935 76513016 -63803749 - L2 LINE L2 -5 3308 3228 1655 203 0 3 chr10 76513659 76513965 -63802800 - AluJo SINE Alu -7 305 1 1139 262 41 25 chr10 76514106 76514469 -63802296 + MLT1I LTR MaLR 4 372 -37 584 247 54 92 chr10 76515076 76515445 -63801320 + L2 LINE L2 2949 3303 -10 2319 111 0 0 chr10 76515445 76515751 -63801014 + AluSq SINE Alu 1 306 -7 192 260 39 26 chr10 76515770 76515847 -63800918 - MER5B DNA MER1_type -100 78 1 2311 108 0 3 chr10 76516130 76516437 -63800328 - AluSg SINE Alu -4 306 1 2111 127 3 0 chr10 76516679 76516971 -63799794 + AluSx SINE Alu 2 294 -18 234 0 0 0 chr10 76517016 76517042 -63799723 + (TA)n Simple_repeat Simple_repeat 1 26 0 1066 130 0 12 chr10 76517045 76517206 -63799559 - AluSg/x SINE Alu -17 295 137 201 74 0 0 chr10 76517256 76517283 -63799482 + (TAA)n Simple_repeat Simple_repeat 1 27 0 354 299 119 31 chr10 76517289 76517483 -63799282 - MIR SINE MIR -44 218 8 2337 80 10 10 chr10 76517522 76517824 -63798941 + AluSp SINE Alu 1 302 -11 437 280 164 22 chr10 76517911 76518050 -63798715 + MLT1J2 LTR MaLR 115 233 -217 2381 97 0 7 chr10 76518050 76518359 -63798406 + AluSx SINE Alu 1 307 -5 437 280 164 22 chr10 76518359 76518487 -63798278 + MLT1J2 LTR MaLR 233 420 -30 30 59 0 0 chr10 76518537 76518588 -63798177 + AT_rich Low_complexity Low_complexity 1 51 0 2569 92 25 3 chr10 76518588 76518947 -63797818 - L1PA11 LINE L1 -3 6171 5805 2324 100 3 0 chr10 76519128 76519428 -63797337 - AluSp SINE Alu -12 301 1 1558 154 30 30 chr10 76519438 76519773 -63796992 - AluJo SINE Alu 0 312 1 2067 114 7 7 chr10 76519882 76520179 -63796586 + AluSq SINE Alu 10 306 -7 30 45 0 0 chr10 76520345 76520389 -63796376 + AT_rich Low_complexity Low_complexity 1 44 0 1471 69 0 0 chr10 76520400 76520573 -63796192 + AluSg/x SINE Alu 122 294 -16 1837 117 70 4 chr10 76520802 76521075 -63795690 - AluSx SINE Alu -21 291 1 1957 233 83 0 chr10 76521085 76521566 -63795199 - L1MC4 LINE L1 -142 7900 7380 342 0 0 0 chr10 76521666 76521704 -63795061 + (CA)n Simple_repeat Simple_repeat 1 38 0 2124 96 44 3 chr10 76521725 76522018 -63794747 - AluSq SINE Alu -8 305 1 1642 129 33 99 chr10 76522485 76522818 -63793947 + AluJb SINE Alu 1 311 -1 2441 206 49 8 chr10 76522862 76523392 -63793373 + MLT1E2 LTR MaLR 3 554 -72 615 202 124 0 chr10 76523393 76523522 -63793243 + AluSq/x SINE Alu 2 146 -166 600 99 0 0 chr10 76523525 76523606 -63793159 + MLT1E1 LTR MaLR 574 654 0 1967 159 0 0 chr10 76523689 76523984 -63792781 + AluSx SINE Alu 1 295 -17 255 152 0 0 chr10 76524722 76524768 -63791997 + (CA)n Simple_repeat Simple_repeat 2 47 0 292 299 29 36 chr10 76524809 76524946 -63791819 + L1M4 LINE L1 3717 3852 -2294 389 206 54 11 chr10 76524956 76525048 -63791717 + L2 LINE L2 3218 3313 0 234 213 0 64 chr10 76525139 76525233 -63791532 + L1MC4 LINE L1 6615 6702 -1340 * 235 259 99 0 chr10 76525205 76525286 -63791479 - L1MC4 LINE L1 -1340 6702 6614 272 250 0 22 chr10 76525288 76525380 -63791385 + (TATATG)n Simple_repeat Simple_repeat 4 93 0 257 301 150 44 chr10 76525423 76526184 -63790581 + L1M4 LINE L1 4412 5277 -869 2174 124 0 3 chr10 76526184 76526490 -63790275 - AluSx SINE Alu -7 305 1 257 301 150 44 chr10 76526490 76526594 -63790171 + L1M4 LINE L1 5277 5369 -777 2037 127 23 0 chr10 76526606 76526905 -63789860 - AluSx SINE Alu -6 306 1 766 170 0 15 chr10 76527020 76527155 -63789610 - FLAM_C SINE Alu 0 133 1 397 264 57 14 chr10 76527555 76527695 -63789070 + MER117 DNA MER1_type 1 146 -51 1319 200 92 8 chr10 76528818 76529078 -63787687 - AluJo SINE Alu -30 282 1 29 28 0 0 chr10 76529079 76529115 -63787650 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr10 76529128 76529157 -63787608 + AT_rich Low_complexity Low_complexity 1 29 0 1349 144 0 0 chr10 76529176 76529371 -63787394 + AluSg/x SINE Alu 92 286 -24 21 0 0 0 chr10 76529374 76529395 -63787370 + AT_rich Low_complexity Low_complexity 1 21 0 1760 139 0 29 chr10 76529433 76529714 -63787051 + AluJo SINE Alu 24 296 -16 303 255 102 0 chr10 76529756 76529854 -63786911 + MIR SINE MIR 29 136 -126 341 214 14 0 chr10 76529902 76529972 -63786793 - AluSq SINE Alu -104 199 129 219 282 14 28 chr10 76529975 76530046 -63786719 + MIR SINE MIR 174 243 -19 643 283 20 32 chr10 76530142 76530389 -63786376 - MARNA DNA Mariner -293 293 50 2311 91 0 29 chr10 76530391 76530700 -63786065 - AluSx SINE Alu -12 300 1 209 200 0 0 chr10 76531160 76531200 -63785565 + (CA)n Simple_repeat Simple_repeat 1 40 0 1815 156 6 32 chr10 76531273 76531588 -63785177 - AluJb SINE Alu -5 307 1 239 315 117 0 chr10 76531662 76531773 -63784992 + MIR3 SINE MIR 83 206 -2 194 318 79 16 chr10 76531776 76531902 -63784863 - L2 LINE L2 -1 3271 3138 572 301 146 3 chr10 76533130 76533486 -63783279 - L2 LINE L2 -8 3305 2899 829 193 7 0 chr10 76533612 76533798 -63782967 + FRAM SINE Alu 8 194 0 2273 89 4 0 chr10 76533971 76534280 -63782485 + AluSp SINE Alu 1 310 0 606 152 10 0 chr10 76534287 76534386 -63782379 + FLAM_A SINE Alu 1 100 -42 236 271 0 0 chr10 76534513 76534583 -63782182 - MIR SINE MIR -112 150 81 937 114 0 29 chr10 76534604 76534744 -63782021 + AluJb SINE Alu 165 300 -12 214 292 0 0 chr10 76534749 76534797 -63781968 - MIR SINE MIR -195 67 20 290 259 65 125 chr10 76535588 76535621 -63781144 - L3 LINE CR1 -570 1007 974 2103 89 4 0 chr10 76535621 76535890 -63780875 - AluSx SINE Alu -9 303 34 290 259 65 125 chr10 76535890 76536192 -63780573 - L3 LINE CR1 -603 974 692 2194 123 3 0 chr10 76536209 76536510 -63780255 - AluSx SINE Alu -10 302 1 750 250 18 26 chr10 76536767 76536995 -63779770 + MIR SINE MIR 21 246 -16 240 247 25 49 chr10 76537269 76537350 -63779415 + L2 LINE L2 2705 2783 -531 721 218 53 18 chr10 76538589 76538759 -63778006 + MER63A DNA MER1_type 1 176 -34 767 209 0 0 chr10 76538963 76539102 -63777663 - FLAM_C SINE Alu 0 143 5 1591 193 3 10 chr10 76539104 76539410 -63777355 - AluJo SINE Alu -8 304 1 2801 213 5 40 chr10 76539417 76539812 -63776953 - MER82 DNA MER2_type -91 562 192 1728 164 16 23 chr10 76539812 76540122 -63776643 + AluJb SINE Alu 1 308 -4 2801 213 5 40 chr10 76540122 76540308 -63776457 - MER82 DNA MER2_type -461 192 1 2196 114 9 16 chr10 76540501 76540816 -63775949 + AluSp SINE Alu 1 313 0 276 170 0 0 chr10 76540825 76540872 -63775893 + L1MC4 LINE L1 6468 6514 -1528 1027 211 107 30 chr10 76540873 76541103 -63775662 + L1MC4 LINE L1 6712 6972 -1070 2129 124 3 0 chr10 76541103 76541393 -63775372 + AluSx SINE Alu 1 291 -21 1027 211 107 30 chr10 76541393 76541460 -63775305 + L1MC4 LINE L1 6972 7032 -1010 2550 230 58 6 chr10 76541497 76542119 -63774646 + L1MC4 LINE L1 7213 7900 -142 1820 147 6 32 chr10 76542129 76542442 -63774323 + AluJb SINE Alu 1 305 -7 1288 260 81 30 chr10 76542462 76542931 -63773834 + L1MC4 LINE L1 7549 8041 -1 1957 130 19 0 chr10 76542980 76543296 -63773469 + L1MB4 LINE L1 5859 6180 0 528 233 90 0 chr10 76544307 76544320 -63772445 - L1MA10 LINE L1 0 6334 6322 353 273 182 2 chr10 76544320 76544482 -63772283 - L1ME2 LINE L1 -4 6162 5977 2121 194 46 2 chr10 76544482 76544919 -63771846 - L1ME2 LINE L1 -424 5742 5287 1106 179 229 4 chr10 76544983 76545223 -63771542 + AluJb SINE Alu 2 295 -7 2397 238 70 6 chr10 76545239 76545908 -63770857 - L1ME2 LINE L1 -1029 5117 4406 1809 198 0 0 chr10 76545973 76546266 -63770499 - AluJb SINE Alu -19 293 1 307 45 0 65 chr10 76546334 76546380 -63770385 - AluSq/x SINE Alu -169 134 95 2389 97 0 0 chr10 76546411 76546711 -63770054 + AluSq SINE Alu 1 300 -13 1947 134 41 3 chr10 76546811 76547101 -63769664 + AluSg SINE Alu 1 301 -9 242 296 142 31 chr10 76548256 76548418 -63768347 + MIR SINE MIR 82 261 -1 1687 161 20 37 chr10 76548493 76548640 -63768125 + AluJo SINE Alu 1 142 -170 1962 142 17 10 chr10 76548640 76548935 -63767830 + AluSx SINE Alu 1 297 -15 1687 161 20 37 chr10 76548935 76549085 -63767680 + AluJo SINE Alu 142 293 -19 2545 222 79 41 chr10 76549155 76550052 -63766713 + L1ME2 LINE L1 4840 5841 -323 1701 185 13 7 chr10 76550052 76550360 -63766405 + AluJb SINE Alu 1 310 -2 2545 222 79 41 chr10 76550360 76550686 -63766079 + L1ME2 LINE L1 5841 6153 -11 1784 150 30 23 chr10 76550706 76551006 -63765759 + AluJb SINE Alu 1 302 -10 1611 163 24 24 chr10 76551154 76551442 -63765323 - AluSx SINE Alu -24 288 1 4868 157 24 52 chr10 76551443 76552263 -63764502 - L1MA7 LINE L1 -463 5828 4986 1598 165 0 8 chr10 76552263 76552512 -63764253 - AluJb SINE Alu -42 270 24 4868 157 24 52 chr10 76552512 76552924 -63763841 - L1MA7 LINE L1 -1305 4986 4647 1730 177 58 0 chr10 76552924 76553218 -63763547 + AluJb SINE Alu 1 311 -1 4868 157 24 52 chr10 76553218 76553568 -63763197 - L1MA7 LINE L1 -1644 4647 4289 908 153 14 0 chr10 76553669 76553813 -63762952 + AluSg/x SINE Alu 150 295 -15 306 246 0 0 chr10 76553836 76553897 -63762868 - AluJ/FLAM SINE Alu -241 61 1 3978 154 14 10 chr10 76553898 76554539 -63762226 - L1MB3 LINE L1 -45 6138 5501 2395 84 0 0 chr10 76554539 76554861 -63761904 - AluSg SINE Alu 0 310 1 2209 101 0 14 chr10 76554863 76555185 -63761580 - AluSg SINE Alu 0 310 1 3978 154 14 10 chr10 76555185 76555233 -63761532 - L1MB3 LINE L1 -682 5501 5443 599 209 8 0 chr10 76555436 76555565 -63761200 + MIR SINE MIR 119 248 -14 303 236 50 93 chr10 76555813 76555888 -63760877 - MIR SINE MIR -39 223 155 1768 186 0 7 chr10 76555888 76556184 -63760581 - AluJo SINE Alu -18 294 1 303 236 50 93 chr10 76556184 76556248 -63760517 - MIR SINE MIR -107 155 90 277 244 34 37 chr10 76556575 76556664 -63760101 + MER5A DNA MER1_type 25 111 -67 305 231 3 145 chr10 76556855 76556998 -63759767 + L1MC4a LINE L1 5050 5212 -934 225 232 0 72 chr10 76556998 76557011 -63759754 + AluYb8 SINE Alu 127 134 -174 2365 104 10 0 chr10 76557011 76557320 -63759445 + AluSx SINE Alu 1 312 0 305 231 3 145 chr10 76557067 76557445 -63759320 + L1MC4a LINE L1 5212 5291 -855 2017 113 41 10 chr10 76557451 76557742 -63759023 + AluSx SINE Alu 1 300 -12 1262 149 14 50 chr10 76557761 76557983 -63758782 + AluSg/x SINE Alu 74 287 -23 296 231 54 8 chr10 76558004 76558134 -63758631 + L1MC4a LINE L1 5310 5445 -797 230 69 0 0 chr10 76558163 76558192 -63758573 + Alu SINE Alu 9 37 -271 1939 125 3 17 chr10 76558192 76558481 -63758284 - AluSx SINE Alu -1 311 27 1895 92 0 4 chr10 76558481 76558721 -63758044 + AluSx SINE Alu 57 295 -17 305 289 11 0 chr10 76558723 76558813 -63757952 + L1MC4a LINE L1 5498 5588 -576 349 289 99 17 chr10 76558864 76559096 -63757669 + L1MC4a LINE L1 5589 5839 -1969 374 181 149 0 chr10 76559107 76559201 -63757564 + L2 LINE L2 2702 2809 -505 207 264 0 19 chr10 76559369 76559422 -63757343 + L2 LINE L2 3208 3259 -54 275 261 36 18 chr10 76559430 76559541 -63757224 + L1ME3A LINE L1 5844 5956 -214 2258 125 0 0 chr10 76559560 76559865 -63756900 - AluSx SINE Alu -7 305 1 371 133 61 72 chr10 76559921 76559979 -63756786 + (TATAA)n Simple_repeat Simple_repeat 1 58 -121 2252 100 3 0 chr10 76559979 76560270 -63756495 - AluSg SINE Alu -18 292 1 371 133 61 72 chr10 76560270 76560392 -63756373 + (TATAA)n Simple_repeat Simple_repeat 58 179 0 1823 171 0 30 chr10 76560603 76560901 -63755864 - AluJb SINE Alu -21 291 3 1012 223 86 29 chr10 76560902 76561553 -63755212 - L1M4 LINE L1 -3860 2522 1742 344 74 56 0 chr10 76561614 76561668 -63755097 - L1MB4 LINE L1 0 6180 6124 1844 167 26 3 chr10 76561692 76561997 -63754768 - AluSx SINE Alu 0 312 1 2425 82 0 3 chr10 76561997 76562300 -63754465 - AluSp SINE Alu -11 302 1 459 68 0 0 chr10 76562302 76562361 -63754404 - AluSq/x SINE Alu -181 132 74 1073 145 14 99 chr10 76562361 76562582 -63754183 - AluSg SINE Alu -108 202 1 2721 153 20 2 chr10 76562618 76563077 -63753688 - L1MB3 LINE L1 -41 6142 5676 1198 215 4 4 chr10 76563088 76563316 -63753449 - AluJo SINE Alu -76 236 9 708 167 0 58 chr10 76563329 76563467 -63753298 - FLAM_C SINE Alu -2 131 2 1253 228 44 85 chr10 76563473 76563556 -63753209 - L1M4 LINE L1 -4731 1653 1568 2504 103 0 0 chr10 76563556 76563868 -63752897 - AluSx SINE Alu 0 312 1 1743 149 47 18 chr10 76563875 76564177 -63752588 - AluJb SINE Alu 0 310 1 1253 228 44 85 chr10 76564177 76564294 -63752471 - L1M4 LINE L1 -4822 1562 1442 2561 77 3 0 chr10 76564294 76564606 -63752159 - AluSp SINE Alu 0 313 1 1253 228 44 85 chr10 76564606 76564939 -63751826 - L1M4 LINE L1 -4942 1442 1132 500 156 0 13 chr10 76564963 76565040 -63751725 - AluJo SINE Alu -155 157 82 837 134 0 24 chr10 76565056 76565183 -63751582 + AluSq/x SINE Alu 18 141 -171 310 137 1 0 chr10 76565183 76565254 -63751511 + Alu SINE Alu 246 311 0 996 98 13 7 chr10 76565255 76565408 -63751357 - L1MA5A LINE L1 -5 6292 6139 990 211 31 16 chr10 76565410 76565666 -63751099 - L1MB7 LINE L1 0 6184 5925 1857 151 0 39 chr10 76565667 76565835 -63750930 - AluJb SINE Alu -19 293 141 2330 65 3 32 chr10 76565835 76566144 -63750621 - AluY SINE Alu -11 300 1 1857 151 0 39 chr10 76566144 76566280 -63750485 - AluJb SINE Alu -171 141 1 217 306 22 45 chr10 76566400 76566534 -63750231 + CT-rich Low_complexity Low_complexity 1 131 0 235 216 54 0 chr10 76566644 76566718 -63750047 + MIR SINE MIR 123 200 -62 2197 115 6 10 chr10 76566722 76567035 -63749730 + AluSx SINE Alu 1 312 0 997 169 0 0 chr10 76567219 76567379 -63749386 - AluJb SINE Alu -11 301 142 1478 148 22 13 chr10 76567538 76567767 -63748998 + AluSq SINE Alu 1 231 -82 876 173 19 0 chr10 76567803 76567965 -63748800 + AluSg/x SINE Alu 132 296 -16 1023 205 68 6 chr10 76567967 76568289 -63748476 - L1 LINE L1 -2915 3055 2714 3731 226 89 36 chr10 76568294 76568618 -63748147 - L1 LINE L1 -3479 2491 2186 2212 123 7 0 chr10 76568618 76568919 -63747846 + AluSx SINE Alu 1 303 -9 3731 226 89 36 chr10 76568919 76570316 -63746449 - L1 LINE L1 -3784 2186 761 1700 166 3 21 chr10 76570316 76570640 -63746125 - AluJo SINE Alu 0 323 5 3731 226 89 36 chr10 76570640 76571036 -63745729 - L1 LINE L1 -5209 761 388 761 182 0 78 chr10 76571036 76571190 -63745575 + FLAM_C SINE Alu 2 143 0 7752 201 15 20 chr10 76571190 76571518 -63745247 - L1M3de LINE L1 -5247 1406 1078 2383 103 0 0 chr10 76571518 76571830 -63744935 - AluSq SINE Alu -1 312 1 7752 201 15 20 chr10 76571830 76572913 -63743852 - L1M3de LINE L1 -5575 1078 2 458 306 43 5 chr10 76572986 76573172 -63743593 - L1 LINE L1 -5698 193 1 221 171 0 0 chr10 76573717 76573758 -63743007 + L2 LINE L2 3268 3308 -5 2109 210 50 63 chr10 76573996 76574173 -63742592 + L1ME1 LINE L1 802 980 -5404 2152 113 0 0 chr10 76574173 76574486 -63742279 + AluSx SINE Alu 1 313 0 2109 210 50 63 chr10 76574486 76574600 -63742165 + L1ME1 LINE L1 980 1094 -5290 1661 135 83 0 chr10 76574600 76574866 -63741899 + AluSx SINE Alu 1 288 -24 2109 210 50 63 chr10 76574866 76575340 -63741425 + L1ME1 LINE L1 1094 1569 -4815 5753 136 35 66 chr10 76575343 76575541 -63741224 + L1MC1 LINE L1 5185 5387 -946 2107 143 0 0 chr10 76575541 76575834 -63740931 + AluSx SINE Alu 1 293 -19 5753 136 35 66 chr10 76575834 76576279 -63740486 + L1MC1 LINE L1 5387 5844 -489 800 144 7 50 chr10 76576279 76576418 -63740347 + FLAM_C SINE Alu 1 133 0 5753 136 35 66 chr10 76576418 76576956 -63739809 + L1MC1 LINE L1 5844 6333 0 951 252 73 37 chr10 76576955 76577189 -63739576 + L1ME1 LINE L1 1559 1783 -4601 * 2230 123 0 0 chr10 76577189 76577491 -63739274 + AluSx SINE Alu 1 302 -10 951 252 73 37 chr10 76577491 76577731 -63739034 + L1ME1 LINE L1 1783 2150 -4234 916 167 51 42 chr10 76577726 76577942 -63738823 + L1MB7 LINE L1 5950 6167 -17 * 791 230 156 33 chr10 76577947 76578312 -63738453 + L1ME1 LINE L1 3669 4078 -2304 796 226 69 60 chr10 76578316 76578533 -63738232 + AluJo SINE Alu 2 220 -92 2841 190 41 31 chr10 76578573 76579233 -63737532 + L1ME1 LINE L1 4075 4744 -1638 1663 115 12 121 chr10 76579233 76579361 -63737404 + AluJb SINE Alu 3 143 -159 252 0 0 0 chr10 76579361 76579389 -63737376 + (TA)n Simple_repeat Simple_repeat 2 29 0 1663 115 12 121 chr10 76579389 76579583 -63737182 + AluJb SINE Alu 143 290 -12 2841 190 41 31 chr10 76579583 76579659 -63737106 + L1ME1 LINE L1 4744 4818 -1564 2177 160 35 50 chr10 76579661 76579945 -63736820 + MSTB LTR MaLR 1 279 -147 2223 132 0 0 chr10 76579945 76580249 -63736516 + AluSx SINE Alu 1 304 -8 2177 160 35 50 chr10 76580249 76580365 -63736400 + MSTB LTR MaLR 279 395 -31 2059 116 24 10 chr10 76580380 76580674 -63736091 - AluSx SINE Alu -14 298 1 68 0 0 0 chr10 76580726 76580794 -63735971 + AT_rich Low_complexity Low_complexity 1 68 0 271 191 0 0 chr10 76580794 76580841 -63735924 + MSTB-int LTR MaLR 614 660 -991 9761 173 7 11 chr10 76580871 76581109 -63735656 + MSTB-int LTR MaLR 1 239 -1412 2506 89 0 3 chr10 76581109 76581422 -63735343 + AluSx SINE Alu 1 312 0 9761 173 7 11 chr10 76581422 76582836 -63733929 + MSTB-int LTR MaLR 239 1645 -6 2332 160 62 5 chr10 76582843 76583244 -63733521 + MSTB LTR MaLR 3 426 0 1239 197 23 11 chr10 76583244 76583508 -63733257 + L1ME1 LINE L1 4816 5082 -1300 3538 191 13 29 chr10 76583518 76583589 -63733176 - L1MB8 LINE L1 -1 6177 6106 1561 161 60 23 chr10 76583589 76583888 -63732877 - AluJo SINE Alu -2 310 1 3538 191 13 29 chr10 76583888 76584579 -63732186 - L1MB8 LINE L1 -72 6106 5427 4553 164 66 32 chr10 76584588 76584643 -63732122 - L1MB4 LINE L1 -4 6176 6124 1893 59 141 0 chr10 76584643 76584898 -63731867 - AluY SINE Alu -10 291 1 4553 164 66 32 chr10 76584898 76586169 -63730596 - L1MB4 LINE L1 -56 6124 4799 927 189 35 20 chr10 76586174 76586428 -63730337 + L1ME1 LINE L1 5252 5509 -873 1882 106 12 4 chr10 76586430 76586686 -63730079 + AluSx SINE Alu 30 287 -25 259 202 20 0 chr10 76586686 76586785 -63729980 + (TA)n Simple_repeat Simple_repeat 2 102 0 2519 203 63 50 chr10 76586846 76587023 -63729742 + L1ME1 LINE L1 5507 5680 -722 2439 86 3 0 chr10 76587023 76587326 -63729439 + AluSq SINE Alu 1 304 -9 2519 203 63 50 chr10 76587326 76587844 -63728921 + L1ME1 LINE L1 5680 6211 -191 561 217 29 18 chr10 76588073 76588251 -63728514 + L1MA10 LINE L1 5987 6331 -3 771 220 0 36 chr10 76588268 76588436 -63728329 + L1M4 LINE L1 5547 5708 -470 2276 109 3 0 chr10 76588437 76588730 -63728035 - AluSx SINE Alu -18 294 1 1761 154 0 0 chr10 76588768 76589028 -63727737 + AluJb SINE Alu 1 260 -52 2248 108 0 0 chr10 76589168 76589455 -63727310 - AluSg1 SINE Alu -19 290 4 2267 108 37 0 chr10 76589459 76589756 -63727009 - AluSx SINE Alu -4 308 1 586 214 212 84 chr10 76590518 76590910 -63725855 + MLT1J1 LTR MaLR 1 442 -4 1200 127 0 21 chr10 76590929 76591118 -63725647 - Tigger7 DNA MER2_type -20 2471 2287 994 168 54 0 chr10 76591119 76591286 -63725479 + AluJb SINE Alu 111 286 -26 561 102 111 28 chr10 76591287 76591395 -63725370 - Tigger7 DNA MER2_type -162 2325 2209 654 167 246 14 chr10 76591400 76591538 -63725227 - Tigger7 DNA MER2_type -2317 170 1 2078 122 7 3 chr10 76591573 76591868 -63724897 - AluSx SINE Alu -16 296 1 2118 120 0 0 chr10 76591971 76592312 -63724453 - AluSx SINE Alu 0 341 1 961 125 21 0 chr10 76592326 76592470 -63724295 + MSTD LTR MaLR 250 396 0 386 264 128 7 chr10 76593100 76593248 -63723517 - MIR SINE MIR 0 262 97 204 200 0 0 chr10 76593922 76593962 -63722803 + G-rich Low_complexity Low_complexity 3 42 0 2088 98 11 0 chr10 76594715 76595016 -63721749 + AluSx SINE Alu 3 306 0 380 283 100 40 chr10 76595074 76595325 -63721440 + L1ME LINE L1 5333 5598 -523 2234 88 3 63 chr10 76595332 76595525 -63721240 - AluSq SINE Alu -2 311 145 2267 110 0 22 chr10 76595525 76595842 -63720923 - AluSg SINE Alu 0 310 1 2234 88 3 63 chr10 76595842 76595979 -63720786 - AluSq SINE Alu -168 145 1 789 192 11 28 chr10 76595991 76596168 -63720597 + AluJb SINE Alu 120 293 -19 2326 88 7 0 chr10 76596227 76596521 -63720244 - AluSp SINE Alu -17 296 1 2203 128 0 0 chr10 76596521 76596826 -63719939 - AluSx SINE Alu -7 305 1 2209 75 12 56 chr10 76596826 76597145 -63719620 + MER4E LTR ERV1 462 766 0 327 247 94 19 chr10 76597145 76597285 -63719480 + MIR SINE MIR 37 187 -61 180 0 0 0 chr10 76597286 76597306 -63719459 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 323 305 92 12 chr10 76597367 76597531 -63719234 + L1ME LINE L1 5614 5790 -331 319 188 0 31 chr10 76597544 76597608 -63719157 - L1MC4a LINE L1 -1883 5925 5864 604 266 91 37 chr10 76597609 76597850 -63718915 - L1MC4a LINE L1 -2138 5670 5417 2369 107 0 0 chr10 76597850 76598158 -63718607 - AluSq SINE Alu -5 308 1 2203 98 24 3 chr10 76598262 76598557 -63718208 - AluSx SINE Alu -11 301 1 905 117 0 29 chr10 76598599 76598736 -63718029 - FLAM_C SINE Alu 0 143 11 183 80 0 0 chr10 76599446 76599471 -63717294 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 2475 80 0 19 chr10 76599658 76599971 -63716794 - AluSp SINE Alu -6 307 1 44 0 0 0 chr10 76599971 76600015 -63716750 + AT_rich Low_complexity Low_complexity 1 44 0 1469 185 45 35 chr10 76600016 76600199 -63716566 - AluJo SINE Alu -23 289 100 2958 166 90 51 chr10 76600199 76600899 -63715866 - LTR8A LTR ERV1 0 727 1 1469 185 45 35 chr10 76600899 76601001 -63715764 - AluJo SINE Alu -212 100 1 29 28 0 0 chr10 76601001 76601037 -63715728 + AT_rich Low_complexity Low_complexity 1 36 0 1150 201 137 0 chr10 76601037 76601286 -63715479 - AluJo SINE Alu -19 283 1 1479 155 15 103 chr10 76601286 76601627 -63715138 - AluJb SINE Alu -1 311 1 1619 175 0 27 chr10 76601630 76601951 -63714814 - AluJb SINE Alu 0 313 1 2306 163 100 83 chr10 76601953 76602089 -63714676 + LTR8A LTR ERV1 140 272 -455 2238 110 0 0 chr10 76602089 76602380 -63714385 - AluSg SINE Alu -19 291 1 1638 191 7 13 chr10 76602382 76602686 -63714079 - AluJo SINE Alu -10 302 1 2161 131 7 0 chr10 76602692 76602990 -63713775 - AluSx SINE Alu -12 300 1 2306 163 100 83 chr10 76602990 76603421 -63713344 + LTR8A LTR ERV1 276 727 0 375 143 0 0 chr10 76603421 76603484 -63713281 - L1MA9 LINE L1 -69 6243 6181 2003 111 8 43 chr10 76603517 76603874 -63712891 - MER4A LTR ERV1 0 664 261 690 111 0 10 chr10 76603874 76603973 -63712792 - MER4A LTR ERV1 -566 98 1 10054 92 44 22 chr10 76603982 76605512 -63711253 - MER4A-int LTR ERV1 -2 6596 5033 1759 144 99 19 chr10 76605512 76605562 -63711203 + MER41C LTR ERV1 218 263 -291 2187 123 0 7 chr10 76605562 76605862 -63710903 + AluSg SINE Alu 1 298 -12 1759 144 99 19 chr10 76605862 76606123 -63710642 + MER41C LTR ERV1 263 554 0 257 135 365 14 chr10 76606125 76606199 -63710566 + MER41C-int LTR ERV1 3 102 -5844 3674 87 51 0 chr10 76606208 76606701 -63710064 + MER41C-int LTR ERV1 1 518 -7238 * 13763 99 42 30 chr10 76606696 76607214 -63709551 + MER41C-int LTR ERV1 647 1157 -6599 2352 109 0 0 chr10 76607214 76607516 -63709249 - AluSp SINE Alu -9 304 3 13763 99 42 30 chr10 76607516 76608359 -63708406 + MER41C-int LTR ERV1 1157 1988 -5768 3419 114 50 60 chr10 76608359 76608979 -63707786 + LTR18B LTR ERVL 1 614 0 13763 99 42 30 chr10 76608979 76609737 -63707028 + MER41C-int LTR ERV1 1988 2804 -4952 2511 69 0 7 chr10 76609737 76610043 -63706722 + AluSc SINE Alu 1 304 -5 13763 99 42 30 chr10 76610043 76610299 -63706466 + MER41C-int LTR ERV1 2804 3055 -4701 1734 66 0 54 chr10 76610294 76610349 -63706416 + MER41C-int LTR ERV1 4394 4450 -3306 * 2150 118 14 0 chr10 76610349 76610659 -63706106 + AluSq SINE Alu 1 313 0 1734 66 0 54 chr10 76610659 76610845 -63705920 + MER41C-int LTR ERV1 4450 4622 -3134 8415 72 30 19 chr10 76610849 76611610 -63705155 + MER41C-int LTR ERV1 5144 5924 -1832 2230 132 0 0 chr10 76611610 76611914 -63704851 + AluSq SINE Alu 1 304 -9 8415 72 30 19 chr10 76611914 76612266 -63704499 + MER41C-int LTR ERV1 5924 6270 -1486 1463 110 38 0 chr10 76612258 76612467 -63704298 + MER41C-int LTR ERV1 7540 7756 0 * 3340 126 86 0 chr10 76612467 76612977 -63703788 + MER41C LTR ERV1 1 554 0 2686 106 115 53 chr10 76613002 76613052 -63703713 - MER4A-int LTR ERV1 -5912 686 641 2228 127 0 9 chr10 76613052 76613367 -63703398 + AluSx SINE Alu 1 312 0 2686 106 115 53 chr10 76613367 76613884 -63702881 - MER4A-int LTR ERV1 -5957 641 1 1803 124 156 87 chr10 76613887 76614265 -63702500 - MER4A LTR ERV1 0 664 261 592 152 0 10 chr10 76614265 76614364 -63702401 - MER4A LTR ERV1 -566 98 1 341 211 0 0 chr10 76614364 76614421 -63702344 + MER21B LTR ERV1 26 82 -781 1048 171 0 0 chr10 76614427 76614591 -63702174 - FRAM SINE Alu -14 162 1 3432 167 124 34 chr10 76614600 76615311 -63701454 + MER21B LTR ERV1 89 863 0 561 162 45 65 chr10 76615315 76615469 -63701296 - L1MA9 LINE L1 -127 6185 6035 2154 104 0 7 chr10 76615494 76615782 -63700983 + AluSx SINE Alu 1 286 -26 2216 180 12 10 chr10 76615934 76616335 -63700430 - MER57A LTR ERV1 0 403 2 240 265 0 61 chr10 76616340 76616438 -63700327 - L2 LINE L2 0 3313 3222 307 231 0 0 chr10 76616511 76616576 -63700189 + AluS SINE Alu 1 65 -236 410 127 0 0 chr10 76616733 76616788 -63699977 + AluS SINE Alu 26 80 -233 1997 130 0 0 chr10 76616790 76617060 -63699705 - AluSx SINE Alu -30 282 13 1759 163 31 7 chr10 76617167 76617461 -63699304 + AluJb SINE Alu 1 301 -11 1777 174 0 26 chr10 76617695 76618006 -63698759 - AluJo SINE Alu -9 303 1 2202 181 59 30 chr10 76618114 76618605 -63698160 + MLT1D LTR MaLR 1 505 0 643 280 16 0 chr10 76618620 76618806 -63697959 + L1MC4 LINE L1 7261 7449 -593 929 185 0 0 chr10 76618818 76618969 -63697796 - AluSg/x SINE Alu -6 306 156 180 0 0 0 chr10 76620529 76620549 -63696216 + (TCCCG)n Simple_repeat Simple_repeat 1 20 0 312 246 78 90 chr10 76620865 76621121 -63695644 + L1M2 LINE L1 756 1008 -5841 288 278 57 68 chr10 76623696 76623872 -63692893 + MER5A DNA MER1_type 16 189 0 435 261 91 24 chr10 76624974 76625139 -63691626 + MER5B DNA MER1_type 3 178 0 1675 146 55 7 chr10 76625140 76625415 -63691350 - AluJb SINE Alu -3 309 22 334 86 241 0 chr10 76625415 76625473 -63691292 + AluJ/FLAM SINE Alu 21 92 -210 1780 178 0 3 chr10 76625725 76626017 -63690748 + AluJo SINE Alu 5 295 -17 2397 94 3 0 chr10 76626118 76626415 -63690350 - AluSp SINE Alu -15 298 1 2122 130 0 31 chr10 76626813 76627135 -63689630 - AluSx SINE Alu 0 312 1 349 260 0 0 chr10 76627345 76627422 -63689343 + L2 LINE L2 3237 3313 0 216 0 0 0 chr10 76627654 76627678 -63689087 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 870 92 38 0 chr10 76627678 76627809 -63688956 - L1PB1 LINE L1 -45 6106 5971 210 37 0 0 chr10 76627814 76627841 -63688924 + (T)n Simple_repeat Simple_repeat 1 27 0 243 316 7 33 chr10 76628218 76628370 -63688395 + GA-rich Low_complexity Low_complexity 5 152 0 1421 184 48 66 chr10 76628407 76628864 -63687901 + L1MB5 LINE L1 5718 6166 -8 267 244 275 16 chr10 76628911 76629104 -63687661 - MIR SINE MIR 0 262 20 1748 172 7 10 chr10 76629865 76630161 -63686604 + AluJo SINE Alu 1 295 -17 2277 99 3 3 chr10 76630189 76630492 -63686273 + AluSc SINE Alu 1 303 -6 213 235 37 37 chr10 76630718 76630799 -63685966 + L2 LINE L2 3188 3268 -4 1127 113 0 6 chr10 76631525 76631685 -63685080 - AluSx SINE Alu -5 305 147 727 151 8 24 chr10 76631819 76631945 -63684820 - AluSx SINE Alu -172 141 18 331 116 0 0 chr10 76631961 76632004 -63684761 + FLAM SINE Alu 82 124 -9 1038 199 60 117 chr10 76632062 76632396 -63684369 + L1M4c LINE L1 1132 1435 -4949 2502 83 3 0 chr10 76632396 76632708 -63684057 + AluSp SINE Alu 1 313 0 1038 199 60 117 chr10 76632708 76632825 -63683940 + L1M4c LINE L1 1435 1557 -4827 1825 150 43 17 chr10 76632825 76633125 -63683640 + AluJo SINE Alu 1 308 -4 2128 115 3 42 chr10 76633135 76633280 -63683485 + AluSq SINE Alu 1 150 -163 2449 75 3 0 chr10 76633280 76633573 -63683192 + AluSp SINE Alu 2 295 -18 2128 115 3 42 chr10 76633573 76633740 -63683025 + AluSq SINE Alu 150 301 -12 4764 118 4 19 chr10 76633745 76634477 -63682288 + L1MA4A LINE L1 5575 6295 -8 1464 184 11 42 chr10 76634499 76634782 -63681983 - AluJo SINE Alu -33 279 6 1260 208 72 11 chr10 76634788 76635067 -63681698 - AluJo SINE Alu -16 296 1 2252 104 7 0 chr10 76635078 76635375 -63681390 - AluSp SINE Alu -14 299 1 2350 96 3 0 chr10 76635400 76635701 -63681064 - AluSx SINE Alu -10 302 1 192 77 0 0 chr10 76635787 76635813 -63680952 + (T)n Simple_repeat Simple_repeat 1 26 0 304 149 0 0 chr10 76635817 76635864 -63680901 - FLAM_A SINE Alu -41 92 46 2196 128 0 0 chr10 76635897 76636193 -63680572 - AluSg SINE Alu -14 296 1 668 203 8 8 chr10 76636495 76636628 -63680137 + AluJ SINE Alu 2 134 -178 24 0 0 0 chr10 76636628 76636652 -63680113 + AT_rich Low_complexity Low_complexity 1 24 0 1009 175 0 44 chr10 76636664 76636847 -63679918 + AluJ SINE Alu 120 294 -18 2175 95 0 57 chr10 76636877 76637192 -63679573 + AluSx SINE Alu 1 297 -15 1913 97 0 4 chr10 76637210 76637495 -63679270 + AluSp SINE Alu 41 324 0 2487 61 7 0 chr10 76637498 76637792 -63678973 + AluSg SINE Alu 1 296 -14 748 209 0 0 chr10 76638038 76638177 -63678588 - AluSg/x SINE Alu -17 295 157 1122 165 0 0 chr10 76638322 76638486 -63678279 + AluJb SINE Alu 129 292 -20 2020 135 7 3 chr10 76638504 76638801 -63677964 + AluSx SINE Alu 1 298 -14 2005 140 0 23 chr10 76638818 76639118 -63677647 + AluSx SINE Alu 12 304 -8 1619 214 44 20 chr10 76639118 76639525 -63677240 + L1MC4 LINE L1 7476 7892 -150 2266 100 13 0 chr10 76639542 76639841 -63676924 + AluSx SINE Alu 1 303 -9 1239 140 0 0 chr10 76639845 76640023 -63676742 + AluSq SINE Alu 130 307 -6 478 205 32 64 chr10 76640044 76640200 -63676565 + L1MC4 LINE L1 7892 8042 0 1557 126 18 0 chr10 76640390 76640612 -63676153 + AluSp SINE Alu 1 226 -87 2221 101 0 20 chr10 76643050 76643348 -63673417 + AluSg SINE Alu 1 292 -18 2464 77 0 3 chr10 76643409 76643709 -63673056 - AluSq SINE Alu -14 299 1 1067 298 145 38 chr10 76644056 76644891 -63671874 + L3 LINE CR1 638 1561 -16 247 326 139 21 chr10 76645253 76645397 -63671368 - MIR SINE MIR -71 191 31 2043 127 30 10 chr10 76645468 76645767 -63670998 + AluSx SINE Alu 1 305 -7 25 65 0 0 chr10 76646486 76646532 -63670233 + AT_rich Low_complexity Low_complexity 1 46 0 2236 111 0 0 chr10 76648062 76648351 -63668414 - AluSx SINE Alu -23 289 1 2354 96 0 0 chr10 76648383 76648676 -63668089 - AluSq SINE Alu -20 293 1 1919 148 0 7 chr10 76649112 76649409 -63667356 + AluJo SINE Alu 1 295 -17 2397 94 3 0 chr10 76649510 76649807 -63666958 - AluSp SINE Alu -15 298 1 2122 130 0 31 chr10 76650205 76650527 -63666238 - AluSx SINE Alu 0 312 1 349 260 0 0 chr10 76650737 76650814 -63665951 + L2 LINE L2 3237 3313 0 216 0 0 0 chr10 76651046 76651070 -63665695 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 870 92 38 0 chr10 76651070 76651201 -63665564 - L1PB1 LINE L1 -45 6106 5971 2527 70 0 16 chr10 76651206 76651520 -63665245 - AluY SINE Alu -2 309 1 22 0 0 0 chr10 76651523 76651545 -63665220 + AT_rich Low_complexity Low_complexity 1 22 0 724 190 95 7 chr10 76651856 76651993 -63664772 + AluJb SINE Alu 87 235 -77 2103 115 26 7 chr10 76652017 76652322 -63664443 - AluSx SINE Alu -1 311 1 29 37 0 19 chr10 76652559 76652589 -63664176 + AT_rich Low_complexity Low_complexity 1 31 -22 2211 124 3 3 chr10 76652589 76652895 -63663870 - AluSc SINE Alu -3 306 1 29 37 0 19 chr10 76652895 76652918 -63663847 + AT_rich Low_complexity Low_complexity 31 53 0 2340 101 3 7 chr10 76653539 76653847 -63662918 + AluSp SINE Alu 1 307 -6 2325 121 0 0 chr10 76654064 76654377 -63662388 - AluSq SINE Alu 0 313 1 766 124 0 0 chr10 76654409 76654514 -63662251 - MER30 DNA MER1_type 0 230 126 1034 128 0 0 chr10 76654521 76654700 -63662065 + AluSg/x SINE Alu 141 319 0 790 71 71 40 chr10 76654700 76654826 -63661939 - MER30 DNA MER1_type -100 130 1 2002 136 3 3 chr10 76655150 76655436 -63661329 - AluSx SINE Alu -22 290 5 2099 103 3 27 chr10 76655458 76655759 -63661006 - AluSx SINE Alu -18 294 1 891 213 72 24 chr10 76655838 76656087 -63660678 - MIR SINE MIR 0 262 2 2268 40 0 0 chr10 76656102 76656355 -63660410 - AluY SINE Alu -15 296 44 1664 93 0 5 chr10 76657272 76657486 -63659279 - AluSg/x SINE Alu -16 296 84 2401 88 3 0 chr10 76657494 76657791 -63658974 - AluSc SINE Alu -11 298 1 1238 111 11 37 chr10 76659270 76659449 -63657316 - AluJb SINE Alu -7 305 130 1944 151 7 16 chr10 76659449 76659754 -63657011 - AluJb SINE Alu -10 302 1 2230 97 0 16 chr10 76659781 76660089 -63656676 - AluSg SINE Alu -7 303 1 493 222 105 130 chr10 76661907 76662257 -63654508 - L1MC4 LINE L1 -25 8017 7681 2175 107 0 3 chr10 76662257 76662547 -63654218 - AluSx SINE Alu -23 289 1 493 222 105 130 chr10 76662547 76662673 -63654092 - L1MC4 LINE L1 -361 7681 7553 1507 139 27 19 chr10 76663064 76663323 -63653442 - AluSq SINE Alu -51 262 2 643 78 11 0 chr10 76663994 76664084 -63652681 - L1PA6 LINE L1 0 6154 6064 380 286 146 16 chr10 76664303 76664488 -63652277 - MIR SINE MIR -7 255 47 1933 142 0 32 chr10 76664654 76664794 -63651971 + AluSx SINE Alu 1 144 -168 2431 68 7 0 chr10 76664794 76665089 -63651676 + AluSp SINE Alu 1 297 -16 1933 142 0 32 chr10 76665089 76665259 -63651506 + AluSx SINE Alu 144 301 -11 732 243 107 37 chr10 76665347 76665590 -63651175 - MIR SINE MIR 0 262 3 204 289 0 0 chr10 76666155 76666200 -63650565 - L3 LINE CR1 -9 1568 1524 665 245 26 7 chr10 76666330 76666485 -63650280 + MER5B DNA MER1_type 1 158 -20 230 256 0 0 chr10 76666630 76666673 -63650092 + MIR SINE MIR 29 71 -191 544 244 108 48 chr10 76667000 76667295 -63649470 - L1ME4a LINE L1 -11 6110 5798 621 252 100 33 chr10 76667298 76667648 -63649117 - L1P1 LINE L1 -375 5746 5385 530 207 108 98 chr10 76667695 76668000 -63648765 - HAL1 LINE L1 -96 2411 2104 1175 124 0 6 chr10 76668005 76668174 -63648591 - AluSc SINE Alu -10 299 132 1821 74 12 8 chr10 76668174 76668417 -63648348 - AluSx SINE Alu -6 306 63 359 100 0 0 chr10 76668423 76668473 -63648292 + MER2 DNA MER2_type 228 277 -68 892 159 0 32 chr10 76668494 76668651 -63648114 - AluSg/x SINE Alu -26 286 135 414 266 24 8 chr10 76668980 76669104 -63647661 + MIR SINE MIR 99 224 -38 2148 135 0 3 chr10 76669453 76669757 -63647008 - AluSx SINE Alu -9 303 1 1267 206 40 0 chr10 76669840 76670068 -63646697 - MER8 DNA MER2_type 0 239 3 690 205 35 116 chr10 76670084 76670455 -63646310 + L1MC4 LINE L1 7702 8042 0 1662 201 97 15 chr10 76670480 76670892 -63645873 + MER113 DNA MER1_type? 76 521 0 379 196 43 0 chr10 76671112 76671204 -63645561 + LTR54 LTR ERV1 402 497 -13 624 188 18 0 chr10 76672170 76672282 -63644483 - FLAM_A SINE Alu -1 141 28 533 327 46 6 chr10 76672657 76672898 -63643867 - MIR SINE MIR -7 255 8 1879 122 40 23 chr10 76673222 76673526 -63643239 - AluSx SINE Alu -3 309 1 258 179 146 89 chr10 76673620 76673743 -63643022 + L2 LINE L2 3117 3246 -67 1769 146 3 45 chr10 76673938 76674246 -63642519 + AluJb SINE Alu 1 295 -17 2202 99 10 0 chr10 76674523 76674817 -63641948 - AluSp SINE Alu -15 298 2 2201 100 0 26 chr10 76674818 76675127 -63641638 - AluSx SINE Alu -11 301 1 2265 130 0 0 chr10 76675127 76675434 -63641331 - AluSx SINE Alu -5 307 1 818 187 0 0 chr10 76675491 76675625 -63641140 + AluJo SINE Alu 1 134 -178 211 216 0 20 chr10 76675821 76675872 -63640893 + MIR SINE MIR 103 152 -110 183 317 0 0 chr10 76676043 76676084 -63640681 + L2 LINE L2 3210 3250 -22 278 338 124 20 chr10 76676121 76676322 -63640443 + L3 LINE CR1 1349 1570 -7 1586 199 0 7 chr10 76676323 76676619 -63640146 - AluJb SINE Alu -18 294 1 846 168 15 0 chr10 76676622 76676753 -63640012 - AluJo SINE Alu -176 136 4 875 216 254 6 chr10 76676779 76677113 -63639652 + L1MC4 LINE L1 7625 8041 -1 1682 164 0 15 chr10 76677122 76677390 -63639375 + AluJo SINE Alu 3 266 -46 279 0 0 0 chr10 76677392 76677423 -63639342 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 441 291 86 14 chr10 76677430 76677650 -63639115 - L2 LINE L2 -609 2705 2470 249 287 75 32 chr10 76677744 76677838 -63638927 - MIR SINE MIR -79 183 86 779 219 80 13 chr10 76677894 76678132 -63638633 - MER112 DNA MER1_type 0 256 3 216 0 0 0 chr10 76678312 76678336 -63638429 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2124 99 3 7 chr10 76678339 76678622 -63638143 - AluSx SINE Alu -30 282 1 349 66 33 0 chr10 76678734 76678795 -63637970 + (TG)n Simple_repeat Simple_repeat 2 64 0 1484 149 32 24 chr10 76678799 76679047 -63637718 - L1MC1 LINE L1 -5 6328 6079 2077 130 37 0 chr10 76679408 76679707 -63637058 - AluSx SINE Alu -2 310 1 2312 110 3 0 chr10 76680573 76680882 -63635883 + AluSx SINE Alu 1 310 -2 521 129 0 0 chr10 76680933 76681003 -63635762 - AluSg/x SINE Alu -37 275 206 507 200 124 0 chr10 76681248 76681311 -63635454 - MLT1A1 LTR MaLR -202 163 109 1597 172 47 24 chr10 76681311 76681607 -63635158 - AluJb SINE Alu -9 303 1 507 200 124 0 chr10 76681607 76681688 -63635077 - MLT1A1 LTR MaLR -256 109 1 1876 125 14 7 chr10 76682797 76683127 -63633638 - AluSx SINE Alu 0 332 1 1054 277 72 9 chr10 76683628 76684099 -63632666 - L1 LINE L1 -1594 4552 4018 203 179 0 0 chr10 76684101 76684140 -63632625 + T-rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr10 76684480 76684511 -63632254 + AT_rich Low_complexity Low_complexity 1 31 0 2627 42 0 0 chr10 76685167 76685474 -63631291 - AluY SINE Alu -4 307 1 325 87 71 9 chr10 76686064 76686147 -63630618 - Alu SINE Alu -4 298 246 280 299 28 0 chr10 76686174 76686318 -63630447 + CT-rich Low_complexity Low_complexity 2 149 0 28 0 0 0 chr10 76687189 76687217 -63629548 + GC_rich Low_complexity Low_complexity 1 28 0 221 270 51 29 chr10 76687300 76687437 -63629328 + G-rich Low_complexity Low_complexity 4 143 0 1821 118 14 24 chr10 76687757 76688046 -63628719 - AluSx SINE Alu -26 286 1 712 142 31 55 chr10 76690649 76690776 -63625989 + FLAM_C SINE Alu 4 127 -16 222 149 14 81 chr10 76691522 76691596 -63625169 + (CCCCG)n Simple_repeat Simple_repeat 1 69 0 246 309 17 44 chr10 76692435 76692616 -63624149 + CT-rich Low_complexity Low_complexity 3 178 0 758 224 11 17 chr10 76693174 76693348 -63623417 - L1ME LINE L1 -374 5788 5616 350 244 78 0 chr10 76693363 76693453 -63623312 - MER94 DNA DNA -34 100 4 992 228 104 59 chr10 76693455 76693655 -63623110 - L1ME LINE L1 -548 5622 5432 324 0 0 0 chr10 76693655 76693691 -63623074 + (TA)n Simple_repeat Simple_repeat 2 37 0 2331 105 0 3 chr10 76693698 76694012 -63622753 - AluSq SINE Alu 0 313 1 992 228 104 59 chr10 76694012 76694367 -63622398 - L1ME LINE L1 -743 5427 5029 457 330 33 23 chr10 76694620 76694835 -63621930 - MIR SINE MIR -6 256 40 737 169 0 8 chr10 76695267 76695385 -63621380 + FLAM_C SINE Alu 2 118 -15 365 169 0 0 chr10 76695422 76695487 -63621278 - AluSp/q SINE Alu 0 303 239 32 0 0 0 chr10 76696625 76696657 -63620108 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr10 76696741 76696768 -63619997 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr10 76697827 76697867 -63618898 + AT_rich Low_complexity Low_complexity 1 40 0 30 89 0 0 chr10 76698567 76698646 -63618119 + AT_rich Low_complexity Low_complexity 1 79 0 367 278 68 6 chr10 76700024 76700186 -63616579 - L1ME4a LINE L1 -4 6117 5946 330 326 127 67 chr10 76700653 76701883 -63614882 + L2 LINE L2 1867 3214 -58 894 181 29 12 chr10 76701966 76702137 -63614628 - MLT1D LTR MaLR -2 503 330 2328 71 0 39 chr10 76702138 76702448 -63614317 - AluY SINE Alu -13 298 1 2184 116 3 0 chr10 76702758 76703060 -63613705 - AluSx SINE Alu -9 303 1 4769 165 41 8 chr10 76703080 76704028 -63612737 - L1MB2 LINE L1 -1 6170 5191 216 0 0 0 chr10 76704040 76704064 -63612701 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1549 141 107 15 chr10 76704229 76704492 -63612273 - AluSg SINE Alu -23 287 1 207 0 0 0 chr10 76704618 76704641 -63612124 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2144 114 7 10 chr10 76704961 76705268 -63611497 - AluSx SINE Alu -6 306 1 499 156 11 44 chr10 76707129 76707219 -63609546 - FRAM SINE Alu -18 158 72 2007 214 79 4 chr10 76708163 76708596 -63608169 + MLT1E2 LTR MaLR 137 596 -30 1537 168 152 0 chr10 76709001 76709304 -63607461 - MLT1E1 LTR MaLR 0 654 306 183 206 63 63 chr10 76710414 76710477 -63606288 + MIR3 SINE MIR 105 167 -41 786 214 13 0 chr10 76710570 76710724 -63606041 - MER97a DNA MER1_type? -738 156 1 2134 118 14 0 chr10 76710949 76711237 -63605528 + AluSx SINE Alu 1 292 -20 2308 117 0 9 chr10 76712345 76712661 -63604104 - AluSq SINE Alu 0 313 1 316 177 13 76 chr10 76712703 76712726 -63604039 + MER116 DNA Mariner 6 29 -51 2798 131 2 72 chr10 76712726 76713113 -63603652 + MSTC LTR MaLR 1 353 -75 2138 98 37 3 chr10 76713113 76713410 -63603355 + AluSc SINE Alu 1 307 -2 2798 131 2 72 chr10 76713410 76713481 -63603284 + MSTC LTR MaLR 353 427 -1 316 177 13 76 chr10 76713481 76713536 -63603229 + MER116 DNA Mariner 29 79 -1 2026 136 10 0 chr10 76713923 76714218 -63602547 + AluSx SINE Alu 1 298 -14 1785 91 0 33 chr10 76714893 76715136 -63601629 + AluSp SINE Alu 55 289 -24 233 364 66 40 chr10 76715142 76715538 -63601227 - L3 LINE CR1 -1075 502 97 546 177 0 0 chr10 76715716 76715795 -63600970 + AluSx SINE Alu 2 80 -232 2012 122 11 0 chr10 76715797 76716076 -63600689 - AluSx SINE Alu -30 282 1 1786 94 4 4 chr10 76717215 76717450 -63599315 + AluSx SINE Alu 66 300 -10 192 304 123 29 chr10 76717467 76717605 -63599160 - L2 LINE L2 -222 3050 2900 288 254 51 121 chr10 76717645 76717955 -63598810 - MLT1J LTR MaLR -166 345 25 512 248 9 0 chr10 76718044 76718157 -63598608 + MER81 DNA DNA 1 114 0 1290 105 0 0 chr10 76718623 76718785 -63597980 + AluSq SINE Alu 1 162 -151 466 119 0 95 chr10 76718785 76718869 -63597896 + AluS SINE Alu 226 301 -8 2736 165 42 15 chr10 76718886 76719412 -63597353 - L1MB7 LINE L1 -22 6162 5623 2247 107 0 0 chr10 76719435 76719726 -63597039 - AluSx SINE Alu -21 291 1 1919 122 50 0 chr10 76719741 76720020 -63596745 - AluSx SINE Alu -19 293 1 215 255 0 0 chr10 76720156 76720207 -63596558 + MIR SINE MIR 157 207 -55 1658 185 0 11 chr10 76720479 76720766 -63595999 - AluJo SINE Alu -28 284 1 2101 119 3 3 chr10 76723385 76723678 -63593087 - AluSx SINE Alu -19 293 1 833 149 20 34 chr10 76723707 76723855 -63592910 + MER3 DNA MER1_type 1 146 -63 189 94 0 0 chr10 76723861 76723893 -63592872 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 1296 126 117 52 chr10 76723895 76724126 -63592639 - AluJo SINE Alu -30 282 37 312 200 0 0 chr10 76724131 76724186 -63592579 + MER3 DNA MER1_type 155 209 0 296 200 0 0 chr10 76724144 76724194 -63592571 - MER3 DNA MER1_type -120 89 40 * 2387 84 0 3 chr10 76724543 76724842 -63591923 - AluSc SINE Alu -11 298 1 2282 107 10 0 chr10 76726145 76726436 -63590329 - AluSx SINE Alu -18 294 1 1278 199 76 4 chr10 76726537 76726813 -63589952 + AluJo SINE Alu 2 297 -15 646 230 114 36 chr10 76727060 76727505 -63589260 + L1MC/D LINE L1 5135 5608 -554 228 248 31 70 chr10 76727583 76727712 -63589053 + L1MC/D LINE L1 5759 5882 -1926 340 211 191 26 chr10 76727758 76727910 -63588855 + MER104 DNA MER2_type 3 179 -1 26 30 0 0 chr10 76728047 76728080 -63588685 + AT_rich Low_complexity Low_complexity 1 33 0 1687 132 8 0 chr10 76728852 76729095 -63587670 - AluSx SINE Alu -14 298 54 900 167 0 7 chr10 76729168 76729312 -63587453 + AluSq/x SINE Alu 1 143 -169 336 71 0 0 chr10 76729312 76729377 -63587388 + Alu SINE Alu 241 305 0 1862 153 0 0 chr10 76730897 76731179 -63585586 + AluJo SINE Alu 1 282 -30 1220 120 0 16 chr10 76732269 76732453 -63584312 - AluSp SINE Alu -1 312 132 2266 108 13 3 chr10 76733044 76733349 -63583416 - AluSx SINE Alu -4 308 1 1437 208 83 7 chr10 76733597 76733885 -63582880 - AluJo SINE Alu 0 312 3 207 0 0 0 chr10 76734075 76734098 -63582667 + (TATG)n Simple_repeat Simple_repeat 1 23 0 514 124 0 29 chr10 76734099 76734204 -63582561 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 1769 156 52 25 chr10 76735012 76735339 -63581426 - MER44D DNA MER2_type -3 606 1 2215 110 3 3 chr10 76735685 76735993 -63580772 + AluSx SINE Alu 1 308 -4 1692 154 7 49 chr10 76736590 76736895 -63579870 + AluJo SINE Alu 1 292 -20 558 326 143 32 chr10 76737072 76737449 -63579316 + L2 LINE L2 2854 3272 0 2137 125 10 0 chr10 76737665 76737970 -63578795 + AluSg SINE Alu 1 308 -2 1759 155 0 10 chr10 76738600 76738891 -63577874 + AluJb SINE Alu 1 288 -24 1233 224 22 22 chr10 76738960 76739277 -63577488 - L1MC4a LINE L1 -3 7805 7489 190 313 0 81 chr10 76739277 76739376 -63577389 - L2 LINE L2 -11 3261 3171 416 277 42 17 chr10 76739976 76740095 -63576670 - L2 LINE L2 -4 3309 3188 2161 128 0 3 chr10 76740240 76740538 -63576227 + AluSq SINE Alu 1 297 -16 1939 132 3 17 chr10 76740716 76741003 -63575762 + AluSq SINE Alu 1 283 -30 437 265 167 38 chr10 76741088 76741179 -63575586 - L1MEd LINE L1 -4875 1244 1166 2124 118 0 13 chr10 76741179 76741484 -63575281 - AluSx SINE Alu -11 301 1 437 265 167 38 chr10 76741484 76741864 -63574901 - L1MEd LINE L1 -4953 1166 712 2278 112 3 0 chr10 76742889 76743194 -63573571 - AluSq SINE Alu -7 306 1 396 198 45 27 chr10 76744646 76744757 -63572008 - MER113 DNA MER1_type? -408 113 1 186 103 0 0 chr10 76745036 76745065 -63571700 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1766 219 114 23 chr10 76745070 76745929 -63570836 - L2 LINE L2 -18 3295 2364 27 29 0 0 chr10 76745955 76745989 -63570776 + AT_rich Low_complexity Low_complexity 1 34 0 2141 101 27 7 chr10 76746824 76747122 -63569643 - AluSx SINE Alu -8 304 1 208 300 33 44 chr10 76747598 76747688 -63569077 - L2 LINE L2 0 3313 3225 2308 108 0 0 chr10 76747952 76748258 -63568507 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 76749232 76749252 -63567513 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 76750306 76750327 -63566438 + AT_rich Low_complexity Low_complexity 1 21 0 2092 136 0 10 chr10 76751694 76752002 -63564763 - AluSx SINE Alu -7 305 1 23 0 0 0 chr10 76752444 76752467 -63564298 + AT_rich Low_complexity Low_complexity 1 23 0 2061 101 0 4 chr10 76753523 76753791 -63562974 - AluSx SINE Alu -45 267 1 762 272 70 58 chr10 76754003 76754246 -63562519 - MIR SINE MIR -8 254 9 2344 99 0 0 chr10 76755683 76755985 -63560780 + AluSx SINE Alu 1 302 -10 539 300 112 26 chr10 76756759 76756992 -63559773 + MIR SINE MIR 10 262 0 216 216 0 0 chr10 76757027 76757078 -63559687 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 368 167 0 0 chr10 76757158 76757218 -63559547 - AluJo SINE Alu 0 300 241 946 142 12 37 chr10 76757218 76757380 -63559385 - AluJo SINE Alu -154 158 1 2349 86 0 7 chr10 76757898 76758199 -63558566 + AluSg SINE Alu 1 299 -11 181 175 333 24 chr10 76759433 76759559 -63557206 + MIR SINE MIR 88 252 -10 255 316 0 21 chr10 76759574 76759669 -63557096 + (CTA)n Simple_repeat Simple_repeat 2 94 0 634 178 9 9 chr10 76759780 76759887 -63556878 - FRAM SINE Alu -69 107 1 195 42 0 0 chr10 76759893 76759917 -63556848 + (TTG)n Simple_repeat Simple_repeat 2 25 0 546 218 167 26 chr10 76759945 76760101 -63556664 + MER5A DNA MER1_type 12 189 0 228 254 18 0 chr10 76760232 76760287 -63556478 + GA-rich Low_complexity Low_complexity 2 57 0 2243 123 0 0 chr10 76760512 76760814 -63555951 - AluSx SINE Alu -10 302 1 252 0 0 0 chr10 76760828 76760856 -63555909 + (CA)n Simple_repeat Simple_repeat 2 29 0 2237 108 13 0 chr10 76761170 76761476 -63555289 - AluSg SINE Alu 0 310 1 287 250 54 11 chr10 76761599 76761691 -63555074 + L1MC/D LINE L1 5594 5689 -2119 2289 109 0 0 chr10 76762047 76762351 -63554414 - AluSg SINE Alu -6 304 1 860 207 18 6 chr10 76762358 76762522 -63554243 - FRAM SINE Alu 0 166 1 383 317 35 21 chr10 76762694 76762839 -63553926 + MER5B DNA MER1_type 3 149 -29 1524 217 74 75 chr10 76763164 76763644 -63553121 + L1ME2 LINE L1 3191 3670 -2476 2076 113 23 26 chr10 76763644 76763953 -63552812 + AluSx SINE Alu 1 308 -4 1524 217 74 75 chr10 76763953 76764261 -63552504 + L1ME2 LINE L1 3670 3977 -2169 2368 97 3 0 chr10 76764261 76764570 -63552195 + AluSp SINE Alu 1 310 -3 1524 217 74 75 chr10 76764570 76765758 -63551007 + L1ME2 LINE L1 3977 5326 -820 949 307 38 38 chr10 76765758 76766182 -63550583 - LTR16A LTR ERVL 0 450 27 2690 174 104 42 chr10 76766206 76766306 -63550459 + L1ME2 LINE L1 5321 5413 -751 2553 49 3 0 chr10 76766306 76766611 -63550154 + AluY SINE Alu 1 306 -5 2690 174 104 42 chr10 76766611 76767238 -63549527 + L1ME2 LINE L1 5413 6103 -61 2038 101 49 0 chr10 76767238 76767524 -63549241 - AluSx SINE Alu -9 303 4 2690 174 104 42 chr10 76767524 76767581 -63549184 + L1ME2 LINE L1 6103 6155 -9 1307 240 46 19 chr10 76767645 76768120 -63548645 - L1M4 LINE L1 -2427 3719 3232 * 1565 222 91 37 chr10 76768116 76768656 -63548109 + L1ME2 LINE L1 5586 6154 -10 640 132 0 0 chr10 76768658 76768764 -63548001 + L1MB3 LINE L1 6078 6183 0 1913 114 43 11 chr10 76768788 76769069 -63547696 - AluSx SINE Alu -22 290 1 191 262 0 0 chr10 76769268 76769310 -63547455 - L2 LINE L2 0 3313 3272 239 0 32 0 chr10 76771197 76771228 -63545537 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 845 138 43 22 chr10 76772614 76772752 -63544013 + AluJb SINE Alu 1 141 -171 2224 110 0 19 chr10 76772891 76773208 -63543557 - AluSx SINE Alu 0 312 2 591 241 109 58 chr10 76773714 76773850 -63542915 - L2 LINE L2 -60 3253 3125 1643 167 7 7 chr10 76773850 76774144 -63542621 + AluJo SINE Alu 1 294 -18 591 241 109 58 chr10 76774144 76774281 -63542484 - L2 LINE L2 -188 3125 2966 2177 78 23 62 chr10 76774469 76774777 -63541988 - AluSq SINE Alu -17 296 1 239 206 56 84 chr10 76775174 76775281 -63541484 - MIR SINE MIR -50 212 109 208 185 19 56 chr10 76775778 76775832 -63540933 - MIR3 SINE MIR -2 206 155 1217 143 17 9 chr10 76776004 76776234 -63540531 + L1MB3 LINE L1 5900 6131 -52 243 279 333 6 chr10 76776270 76776453 -63540312 - L3 LINE CR1 -160 1417 1175 517 210 64 86 chr10 76776466 76776733 -63540032 - L1MC5 LINE L1 -378 7583 7323 1746 166 31 52 chr10 76776759 76777108 -63539657 + MER2 DNA MER2_type 3 344 0 569 208 50 174 chr10 76777243 76777686 -63539079 - L1MC4 LINE L1 -41 8001 7614 1235 164 10 10 chr10 76777710 76777917 -63538848 - AluJb SINE Alu -23 289 83 770 232 118 16 chr10 76777939 76778185 -63538580 - L1MC4 LINE L1 -473 7569 7299 445 257 106 22 chr10 76778354 76778533 -63538232 + MIR SINE MIR 7 200 -62 327 271 0 12 chr10 76780014 76780099 -63536666 - L2 LINE L2 0 3313 3230 2273 83 0 0 chr10 76780535 76780849 -63535916 + AluSc SINE Alu 1 314 0 2032 86 4 4 chr10 76781313 76781570 -63535195 + AluSc SINE Alu 28 284 -25 431 336 13 22 chr10 76782387 76782616 -63534149 + MIR SINE MIR 28 254 -8 2184 102 3 25 chr10 76785618 76785932 -63530833 + AluSq SINE Alu 1 307 -6 392 325 128 68 chr10 76786018 76787248 -63529517 + L2 LINE L2 1867 3214 -58 1812 232 71 65 chr10 76787331 76787503 -63529262 - MLT1E2 LTR MaLR -2 624 455 2144 64 0 36 chr10 76787503 76787783 -63528982 - AluY SINE Alu -13 298 29 1812 232 71 65 chr10 76787783 76788230 -63528535 - MLT1E2 LTR MaLR -171 455 1 1827 158 3 13 chr10 76788521 76788819 -63527946 + AluJb SINE Alu 1 295 -17 2334 83 0 13 chr10 76788821 76789122 -63527643 + AluY SINE Alu 1 297 -14 188 216 0 0 chr10 76789325 76789362 -63527403 - MIR3 SINE MIR -3 205 169 249 108 0 0 chr10 76792057 76792094 -63524671 + (TA)n Simple_repeat Simple_repeat 2 38 0 260 266 55 31 chr10 76792593 76792721 -63524044 - L1ME4a LINE L1 -205 5916 5786 235 246 14 0 chr10 76792934 76793003 -63523762 - L1ME4a LINE L1 -328 5793 5724 284 207 0 0 chr10 76793011 76793071 -63523694 - L1ME4a LINE L1 -458 5663 5602 246 200 43 14 chr10 76793153 76793223 -63523542 + HsTC2 DNA Tc2 1 72 -1826 392 300 115 30 chr10 76793244 76793444 -63523321 - L1ME4a LINE L1 -633 5488 5272 34 42 0 0 chr10 76793825 76793873 -63522892 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr10 76794973 76794994 -63521771 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 76796865 76796887 -63519878 + AT_rich Low_complexity Low_complexity 1 22 0 770 171 0 16 chr10 76800104 76800233 -63516532 + 7SLRNA srpRNA srpRNA 181 307 -13 399 284 88 0 chr10 76800369 76800471 -63516294 - L2 LINE L2 -5 3308 3198 529 90 13 0 chr10 76800770 76800848 -63515917 - MADE1 DNA Mariner 0 80 2 2125 146 0 0 chr10 76801653 76801962 -63514803 + AluSx SINE Alu 1 309 -3 180 317 89 41 chr10 76802535 76802658 -63514107 - MIR SINE MIR -63 145 17 452 97 0 14 chr10 76803067 76803139 -63513626 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 2151 140 7 0 chr10 76803142 76803450 -63513315 - AluSx SINE Alu -2 310 1 1071 168 10 14 chr10 76804940 76805149 -63511616 - MER20 DNA MER1_type -11 208 1 2188 82 0 4 chr10 76807541 76807856 -63508909 + AluSc SINE Alu 1 314 0 2219 77 17 7 chr10 76808930 76809217 -63507548 + AluSc SINE Alu 1 290 -19 2405 80 3 13 chr10 76811691 76812003 -63504762 + AluSc SINE Alu 1 309 0 23 86 0 0 chr10 76813000 76813058 -63503707 + AT_rich Low_complexity Low_complexity 1 58 0 228 352 91 30 chr10 76813579 76813778 -63502987 + L3b LINE CR1 1351 1561 -22 1486 173 91 29 chr10 76814082 76814424 -63502341 - MER47A DNA MER2_type -3 363 1 5513 212 88 58 chr10 76815046 76816277 -63500488 - L1MC4 LINE L1 -1 8041 6633 2023 103 3 69 chr10 76816277 76816597 -63500168 + AluSx SINE Alu 1 299 -13 5513 212 88 58 chr10 76816597 76817580 -63499185 - L1MC4 LINE L1 -1409 6633 5681 2500 61 0 3 chr10 76818269 76818566 -63498199 + AluSc SINE Alu 5 300 -9 663 159 0 0 chr10 76818866 76818973 -63497792 + FLAM_C SINE Alu 11 117 -26 233 254 0 30 chr10 76818973 76819040 -63497725 + CT-rich Low_complexity Low_complexity 1 65 0 440 272 162 21 chr10 76819120 76819311 -63497454 - MIR SINE MIR -8 254 37 234 273 122 52 chr10 76819385 76819557 -63497208 + L1ME3A LINE L1 5412 5595 -2213 28 29 0 0 chr10 76819568 76819603 -63497162 + AT_rich Low_complexity Low_complexity 1 35 0 2210 124 3 0 chr10 76819606 76819912 -63496853 + AluSx SINE Alu 1 307 -5 706 140 26 0 chr10 76819912 76820026 -63496739 - AluJo/FLAM SINE Alu -194 118 2 260 252 16 71 chr10 76820293 76820420 -63496345 + L1ME3A LINE L1 5709 5828 -293 1657 143 31 44 chr10 76820420 76820714 -63496051 + AluJo SINE Alu 1 290 -22 273 374 59 4 chr10 76821106 76821376 -63495389 - L2 LINE L2 -1034 2280 1996 403 287 127 6 chr10 76821396 76821553 -63495212 - MIR SINE MIR -1 261 86 2045 133 11 0 chr10 76821669 76821947 -63494818 + AluSx SINE Alu 1 281 -31 240 35 0 0 chr10 76821967 76821996 -63494769 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1923 163 14 36 chr10 76824229 76824585 -63492180 - MER7A DNA MER2_type 0 346 1 335 233 128 30 chr10 76824585 76824718 -63492047 + L2 LINE L2 3165 3310 -3 249 252 97 48 chr10 76826005 76826108 -63490657 + L2 LINE L2 3206 3313 0 200 314 128 0 chr10 76826248 76826334 -63490431 - L2 LINE L2 -6 3266 3170 1575 185 0 42 chr10 76826474 76826787 -63489978 - AluJo SINE Alu -8 304 5 2345 116 0 0 chr10 76826983 76827294 -63489471 - AluSx SINE Alu -1 311 1 221 0 35 0 chr10 76827338 76827367 -63489398 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1546 217 78 97 chr10 76827903 76828215 -63488550 + L1MC5 LINE L1 6805 7122 -839 1734 152 30 26 chr10 76828215 76828518 -63488247 - AluJo SINE Alu -8 304 1 1546 217 78 97 chr10 76828518 76828570 -63488195 + L1MC5 LINE L1 7122 7173 -788 2235 97 3 7 chr10 76828570 76828870 -63487895 + AluSx SINE Alu 10 308 -4 1546 217 78 97 chr10 76828870 76829224 -63487541 + L1MC5 LINE L1 7173 7510 -451 470 274 49 31 chr10 76829288 76829511 -63487254 + L1ME3A LINE L1 5927 6153 -17 186 200 75 0 chr10 76831121 76831161 -63485604 + MIR SINE MIR 212 254 -8 2198 93 17 7 chr10 76831500 76831789 -63484976 + AluSp SINE Alu 1 292 -21 21 0 0 0 chr10 76833044 76833065 -63483700 + AT_rich Low_complexity Low_complexity 1 21 0 353 173 27 13 chr10 76833835 76833910 -63482855 + MER5B DNA MER1_type 103 178 0 2072 138 7 0 chr10 76833942 76834239 -63482526 + AluJb SINE Alu 1 299 -13 921 238 42 12 chr10 76835434 76835674 -63481091 - MIR SINE MIR 0 262 16 1351 159 75 112 chr10 76835804 76835970 -63480795 + Charlie1b DNA MER1_type 52 223 -2538 939 112 0 15 chr10 76835970 76836104 -63480661 + FLAM_C SINE Alu 2 133 0 1351 159 75 112 chr10 76836104 76836364 -63480401 + Charlie1b DNA MER1_type 223 462 -61 307 164 0 0 chr10 76836439 76836494 -63480271 + MER5A DNA MER1_type 51 105 -84 756 192 57 40 chr10 76836758 76836935 -63479830 - MER5A DNA MER1_type -2 187 8 2597 63 3 0 chr10 76838636 76838939 -63477826 - AluSp SINE Alu -9 304 1 1814 131 65 0 chr10 76839127 76839417 -63477348 + AluSx SINE Alu 1 309 -3 585 152 0 0 chr10 76843843 76843948 -63472817 + GA-rich Low_complexity Low_complexity 1 105 0 2161 103 28 3 chr10 76844425 76844716 -63472049 + AluSq SINE Alu 1 298 -15 931 142 0 0 chr10 76845500 76845627 -63471138 + FLAM_C SINE Alu 1 127 -16 28 0 0 0 chr10 76845633 76845661 -63471104 + AT_rich Low_complexity Low_complexity 1 28 0 959 147 0 0 chr10 76845897 76846040 -63470725 + FLAM_C SINE Alu 1 143 0 253 268 61 85 chr10 76847324 76847488 -63469277 + MER104 DNA Tc2 5 164 -16 1031 169 0 0 chr10 76847519 76847673 -63469092 + AluJb SINE Alu 1 154 -158 1837 138 52 0 chr10 76847673 76847941 -63468824 + AluJb SINE Alu 20 301 -11 2311 97 0 10 chr10 76848630 76848929 -63467836 + AluSx SINE Alu 1 296 -16 285 297 0 0 chr10 76849345 76849446 -63467319 + (TA)n Simple_repeat Simple_repeat 1 101 0 405 206 0 0 chr10 76850651 76850743 -63466022 + GA-rich Low_complexity Low_complexity 1 92 0 21 0 0 0 chr10 76852946 76852967 -63463798 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 76853388 76853423 -63463342 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 76854282 76854305 -63462460 + AT_rich Low_complexity Low_complexity 1 23 0 278 312 64 7 chr10 76856136 76856297 -63460468 - MIR SINE MIR -55 153 20 497 302 187 27 chr10 76856529 76857149 -63459616 + L2 LINE L2 2068 2786 -528 184 243 84 47 chr10 76857259 76857366 -63459399 + L2 LINE L2 3035 3145 -168 187 355 0 0 chr10 76857386 76857448 -63459317 + L2 LINE L2 3252 3313 0 194 246 43 29 chr10 76859969 76860038 -63456727 + MIR SINE MIR 113 182 -80 204 230 20 10 chr10 76860454 76860554 -63456211 + GA-rich Low_complexity Low_complexity 4 104 0 642 73 0 0 chr10 76860614 76860696 -63456069 + AluSx SINE Alu 2 83 -230 1321 131 45 0 chr10 76861105 76861304 -63455461 + AluSx SINE Alu 87 294 -18 2135 114 17 3 chr10 76861674 76861971 -63454794 + AluSx SINE Alu 1 301 -11 370 327 67 0 chr10 76862447 76862597 -63454168 + MIR3 SINE MIR 18 177 -31 505 285 92 27 chr10 76863056 76863316 -63453449 + Charlie8 DNA MER1_type 1 277 -2140 378 348 179 5 chr10 76863880 76864064 -63452701 - MIR SINE MIR -20 242 27 300 102 0 0 chr10 76865510 76865559 -63451206 + (CGGGG)n Simple_repeat Simple_repeat 5 53 0 367 185 0 76 chr10 76866414 76866506 -63450259 - MER110A LTR ERV1 -304 164 80 678 265 213 22 chr10 76866770 76866851 -63449914 - L2 LINE L2 -2 3311 3247 1965 134 7 42 chr10 76866851 76867158 -63449607 + AluSx SINE Alu 1 296 -16 678 265 213 22 chr10 76867158 76867604 -63449161 - L2 LINE L2 -66 3247 2688 1886 150 16 22 chr10 76867604 76867918 -63448847 + AluJb SINE Alu 1 312 0 442 278 249 28 chr10 76869512 76869969 -63446796 - L1ME4a LINE L1 -7 6114 5557 2136 90 0 25 chr10 76870160 76870439 -63446326 - AluSx SINE Alu -3 309 38 337 226 75 103 chr10 76870817 76870963 -63445802 + L1ME4a LINE L1 5965 6106 -15 489 211 119 9 chr10 76872296 76872405 -63444360 - MIR3 SINE MIR -18 190 70 246 320 140 0 chr10 76873151 76873251 -63443514 - MIR SINE MIR -126 136 23 2518 62 3 3 chr10 76874077 76874383 -63442382 - AluY SINE Alu -5 306 1 1117 106 0 0 chr10 76874386 76874528 -63442237 - AluSq/x SINE Alu -170 142 1 711 299 75 7 chr10 76874648 76874929 -63441836 + MLT1I LTR MaLR 67 366 -43 721 222 123 19 chr10 76875167 76875394 -63441371 - MIR SINE MIR -1 261 15 274 333 0 0 chr10 76875482 76875572 -63441193 + MIR SINE MIR 46 135 -73 361 275 129 67 chr10 76875610 76875788 -63440977 + MIR SINE MIR 74 262 0 339 319 21 35 chr10 76875853 76875994 -63440771 - L2 LINE L2 -212 3060 2922 466 304 66 4 chr10 76875997 76876270 -63440495 + L1ME4a LINE L1 5594 5883 -238 465 267 74 0 chr10 76876458 76876593 -63440172 - MIR SINE MIR -1 261 117 1821 180 0 7 chr10 76876623 76876918 -63439847 - AluJo SINE Alu -19 293 1 357 332 36 66 chr10 76876924 76877120 -63439645 - L1ME LINE L1 -322 5799 5610 274 142 8 221 chr10 76877127 76877182 -63439583 - L1MD3 LINE L1 -13 7982 7967 1920 148 34 14 chr10 76877182 76877540 -63439225 + L1MB7 LINE L1 5806 6170 -14 274 142 8 221 chr10 76877540 76877611 -63439154 - L1MD3 LINE L1 -28 7967 7883 1446 199 20 24 chr10 76877690 76877987 -63438778 - AluJo SINE Alu -16 296 1 1779 136 95 4 chr10 76878021 76878294 -63438471 + AluSq SINE Alu 1 298 -15 1343 95 0 0 chr10 76878294 76878462 -63438303 + AluSg/x SINE Alu 132 299 -11 2090 121 13 22 chr10 76878770 76879084 -63437681 + AluSx SINE Alu 1 311 -1 926 223 55 31 chr10 76879154 76879415 -63437350 + MIR SINE MIR 1 261 -1 315 118 0 20 chr10 76879592 76879643 -63437122 + MLT1J LTR MaLR 85 134 -377 790 274 39 39 chr10 76879690 76879975 -63436790 + MLT1J LTR MaLR 224 508 -3 464 179 45 141 chr10 76881243 76881399 -63435366 - MIR SINE MIR -5 257 117 656 230 76 103 chr10 76881478 76881653 -63435112 + L1MC5 LINE L1 6810 6988 -973 2443 80 0 3 chr10 76881653 76881953 -63434812 + AluSq SINE Alu 1 299 -14 656 230 76 103 chr10 76881953 76881966 -63434799 + L1MC5 LINE L1 6988 7000 -961 1757 155 27 24 chr10 76881966 76882262 -63434503 + AluJb SINE Alu 3 299 -13 656 230 76 103 chr10 76882262 76882495 -63434270 + L1MC5 LINE L1 7000 7218 -743 244 303 49 27 chr10 76882629 76882814 -63433951 + L1MC5 LINE L1 7683 7871 -90 943 125 0 29 chr10 76882824 76882960 -63433805 - FLAM_C SINE Alu -1 132 1 376 290 181 7 chr10 76883213 76883368 -63433397 + MER5A DNA MER1_type 8 189 0 188 250 0 0 chr10 76883559 76883603 -63433162 + L2 LINE L2 3223 3266 -6 224 226 16 16 chr10 76883606 76883668 -63433097 + (TGAG)n Simple_repeat Simple_repeat 3 64 0 387 158 240 27 chr10 76884897 76885043 -63431722 - Charlie8 DNA MER1_type -2152 265 89 844 309 45 3 chr10 76885214 76885551 -63431214 + LTR16C LTR ERVL 138 488 -3 451 68 54 0 chr10 76885585 76885659 -63431106 + L1MA7 LINE L1 6214 6291 0 1783 133 30 56 chr10 76885829 76886004 -63430761 - AluJo SINE Alu -18 294 129 2449 92 0 0 chr10 76886004 76886309 -63430456 + AluSc SINE Alu 1 305 -4 1783 133 30 56 chr10 76886309 76886435 -63430330 - AluJo SINE Alu -183 129 1 1715 130 134 0 chr10 76887136 76887405 -63429360 - AluJo SINE Alu -7 305 1 1482 201 7 24 chr10 76887467 76887653 -63429112 - AluJo SINE Alu -12 300 119 269 0 56 0 chr10 76887653 76887689 -63429076 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 1482 201 7 24 chr10 76887689 76887796 -63428969 - AluJo SINE Alu -193 119 12 289 242 25 67 chr10 76888265 76888385 -63428380 + L1ME4a LINE L1 5989 6103 -18 406 170 148 89 chr10 76888668 76888722 -63428043 - MER69A DNA AcHobo -2349 177 128 2284 131 0 6 chr10 76888722 76889036 -63427729 - AluSx SINE Alu 0 312 1 406 170 148 89 chr10 76889036 76889116 -63427649 - MER69A DNA AcHobo -2398 128 35 319 196 0 0 chr10 76889524 76889580 -63427185 + AluJo/FLAM SINE Alu 70 125 -177 2137 124 0 0 chr10 76889581 76889889 -63426876 - AluSx SINE Alu 0 308 1 21 0 0 0 chr10 76889898 76889919 -63426846 + AT_rich Low_complexity Low_complexity 1 21 0 1837 151 3 20 chr10 76889965 76890263 -63426502 + AluJo SINE Alu 1 293 -19 2104 121 7 26 chr10 76891536 76891831 -63424934 + AluSx SINE Alu 1 291 -21 690 47 0 0 chr10 76891831 76891917 -63424848 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 286 234 126 18 chr10 76891933 76892044 -63424721 - MIR SINE MIR -98 164 42 334 169 162 0 chr10 76892197 76892306 -63424459 + MIR SINE MIR 88 218 -44 480 231 91 59 chr10 76892864 76893085 -63423680 + MIR SINE MIR 8 235 -27 4488 120 58 46 chr10 76893445 76894221 -63422544 + LTR1 LTR ERV1 1 785 0 1648 151 4 40 chr10 76944893 76945171 -63371594 - AluSx SINE Alu -44 268 1 1063 186 81 20 chr10 76945171 76945467 -63371298 + L1M4 LINE L1 4320 4633 -1513 287 163 0 0 chr10 76945510 76945559 -63371206 - MLT1E1 LTR MaLR 0 654 606 * 573 244 68 45 chr10 76945556 76945732 -63371033 - MLT1E3 LTR MaLR -302 322 143 475 234 105 0 chr10 76946190 76946314 -63370451 - L2 LINE L2 -8 3305 3169 1143 214 187 62 chr10 76946356 76946782 -63369983 + MER90 LTR ERV1 70 564 -50 2034 142 10 3 chr10 76946782 76947084 -63369681 + AluSx SINE Alu 1 304 -8 1143 214 187 62 chr10 76947084 76947139 -63369626 + MER90 LTR ERV1 564 611 -3 346 267 191 28 chr10 76947158 76947409 -63369356 - L2 LINE L2 -183 3130 2839 2059 85 0 0 chr10 76947409 76947657 -63369108 + AluSq SINE Alu 1 248 -65 210 191 0 0 chr10 76947822 76947864 -63368901 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr10 76948144 76948165 -63368600 + AT_rich Low_complexity Low_complexity 1 21 0 420 202 32 30 chr10 76948912 76949038 -63367727 + L1ME3A LINE L1 6042 6161 -3 2565 63 0 0 chr10 76949243 76949544 -63367221 + AluY SINE Alu 1 301 -10 726 152 0 0 chr10 76949770 76949875 -63366890 + AluSg/x SINE Alu 184 288 -24 2422 73 7 0 chr10 76949879 76950179 -63366586 + AluSp SINE Alu 1 302 -11 449 239 218 29 chr10 76950181 76950424 -63366341 + HAL1 LINE L1 1795 2083 -424 2408 74 3 10 chr10 76950424 76950733 -63366032 - AluSg SINE Alu -3 307 1 335 180 180 50 chr10 76950756 76950895 -63365870 - L1ME4a LINE L1 0 6121 5965 264 149 0 0 chr10 76950895 76950942 -63365823 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 1841 137 3 45 chr10 76950943 76951256 -63365509 - AluJb SINE Alu -12 300 1 242 163 23 0 chr10 76951256 76951299 -63365466 + CT-rich Low_complexity Low_complexity 3 46 0 2343 90 7 0 chr10 76951447 76951737 -63365028 + AluSx SINE Alu 1 292 -20 2638 152 43 2 chr10 76951743 76952183 -63364582 - L1MB7 LINE L1 -57 6127 5670 2144 142 3 3 chr10 76952185 76952495 -63364270 - AluSx SINE Alu -1 311 2 236 261 61 35 chr10 76952620 76952735 -63364030 + LTR16C LTR ERVL 2 119 -372 355 291 40 0 chr10 76952899 76953050 -63363715 + LTR16C LTR ERVL 318 474 -17 2406 56 0 33 chr10 76953342 76953644 -63363121 - AluY SINE Alu -19 292 1 1431 131 0 0 chr10 76954010 76954216 -63362549 + AluJb SINE Alu 87 292 -20 839 269 134 64 chr10 76954234 76954876 -63361889 + HAL1 LINE L1 420 1106 -1401 2072 117 3 52 chr10 76954877 76955203 -63361562 + AluSq SINE Alu 1 310 -3 397 266 16 83 chr10 76955346 76955598 -63361167 - L1MDa LINE L1 -3753 2787 2553 2151 134 13 0 chr10 76955637 76955944 -63360821 - AluSq SINE Alu -2 311 1 2358 102 0 0 chr10 76956009 76956312 -63360453 - AluSq SINE Alu -8 305 3 2054 115 20 10 chr10 76956475 76956771 -63359994 - AluSx SINE Alu -13 299 1 333 317 11 44 chr10 76956962 76957142 -63359623 - L1MDa LINE L1 -4445 2095 1922 1974 136 95 11 chr10 76957168 76957536 -63359229 - L1MB7 LINE L1 -17 6167 5769 189 0 0 0 chr10 76957536 76957557 -63359208 + (T)n Simple_repeat Simple_repeat 1 21 0 1297 136 118 55 chr10 76959809 76960081 -63356684 - AluJo SINE Alu -23 289 1 2076 135 0 3 chr10 76960462 76960765 -63356000 - AluSx SINE Alu -10 302 1 1129 82 0 0 chr10 76960905 76961066 -63355699 + AluSg/x SINE Alu 149 309 0 2170 129 0 0 chr10 76961826 76962120 -63354645 - AluSx SINE Alu -18 294 1 1826 148 3 34 chr10 76962211 76962509 -63354256 - AluJb SINE Alu -23 289 1 2356 88 0 3 chr10 76962652 76962947 -63353818 - AluY SINE Alu -17 294 1 2085 107 55 0 chr10 76963005 76963295 -63353470 - AluSx SINE Alu 0 312 7 1205 243 85 58 chr10 76964269 76964784 -63351981 - L1MEc LINE L1 -4649 1747 1247 2311 114 21 24 chr10 76964784 76964822 -63351943 - L1MB3 LINE L1 -10 6173 6136 2233 96 0 3 chr10 76964822 76965123 -63351642 - AluY SINE Alu -11 300 1 2311 114 21 24 chr10 76965123 76965462 -63351303 - L1MB3 LINE L1 -47 6136 5797 1205 243 85 58 chr10 76965462 76965507 -63351258 - L1MEc LINE L1 -5149 1247 1205 1765 161 3 7 chr10 76965507 76965792 -63350973 - AluJo SINE Alu -5 307 24 1205 243 85 58 chr10 76965792 76965971 -63350794 - L1MEc LINE L1 -5191 1205 987 591 136 29 0 chr10 76965995 76966098 -63350667 - FLAM_C SINE Alu -36 107 2 3369 210 61 52 chr10 76966098 76966470 -63350295 - L1MEc LINE L1 -5406 990 623 751 181 186 27 chr10 76966470 76966658 -63350107 - MER20 DNA MER1_type -1 218 1 3369 210 61 52 chr10 76966658 76967129 -63349636 - L1MEc LINE L1 -5773 623 135 2478 84 0 3 chr10 76967129 76967440 -63349325 - AluSp SINE Alu -3 310 1 3369 210 61 52 chr10 76967440 76967546 -63349219 - L1MEc LINE L1 -6261 135 31 268 230 11 69 chr10 76968189 76968276 -63348489 - L2 LINE L2 -512 2802 2721 2499 48 37 0 chr10 76968554 76968849 -63347916 - AluY SINE Alu -5 306 1 22 0 0 0 chr10 76968878 76968900 -63347865 + AT_rich Low_complexity Low_complexity 1 22 0 390 212 246 0 chr10 76969044 76969162 -63347603 - MER5A DNA MER1_type -16 173 27 421 226 28 123 chr10 76969411 76969461 -63347304 - L1M4 LINE L1 -1780 4366 4313 2033 140 3 7 chr10 76969461 76969768 -63346997 - AluSx SINE Alu -6 306 1 421 226 28 123 chr10 76969768 76969929 -63346836 - L1M4 LINE L1 -1833 4313 4175 185 257 29 29 chr10 76970898 76970968 -63345797 + MIR SINE MIR 82 151 -111 762 181 106 11 chr10 76970980 76971168 -63345597 + MIR SINE MIR 6 211 -51 1420 132 5 9 chr10 76971264 76971477 -63345288 + AluSq SINE Alu 1 212 -101 420 121 0 0 chr10 76971477 76971535 -63345230 + AluSq/x SINE Alu 78 135 -178 1333 262 169 14 chr10 76971662 76971701 -63345064 + L2 LINE L2 959 991 -2323 2461 86 3 0 chr10 76971701 76972004 -63344761 - AluSp SINE Alu -9 304 1 1333 262 169 14 chr10 76972004 76972593 -63344172 + L2 LINE L2 991 1684 -1630 210 71 0 0 chr10 76972625 76972653 -63344112 + (TC)n Simple_repeat Simple_repeat 1 28 0 1791 228 90 68 chr10 76972673 76973499 -63343266 - L1MC4 LINE L1 -1 8041 7198 1873 156 4 0 chr10 76973677 76973953 -63342812 - AluJo SINE Alu -35 277 1 737 297 22 9 chr10 76974013 76974235 -63342530 - L1MC4 LINE L1 -1946 5862 5638 639 243 86 38 chr10 76974242 76974452 -63342313 + L2 LINE L2 1820 2039 -1275 1704 268 90 37 chr10 76974475 76974694 -63342071 + L2 LINE L2 2233 2439 -874 1745 191 3 0 chr10 76974694 76974993 -63341772 + AluJo SINE Alu 5 304 -8 1704 268 90 37 chr10 76974993 76975511 -63341254 + L2 LINE L2 2439 3008 -305 547 264 77 28 chr10 76975609 76975791 -63340974 - HAL1 LINE L1 -2232 275 85 2154 128 3 7 chr10 76975821 76976125 -63340640 + AluSq SINE Alu 3 305 -8 2069 147 13 0 chr10 76976191 76976498 -63340267 + AluSq SINE Alu 1 311 -2 515 274 20 80 chr10 76976537 76976791 -63339974 + L1M4 LINE L1 2159 2388 -3758 1515 168 3 72 chr10 76976791 76977124 -63339641 + AluJo SINE Alu 1 310 -2 515 274 20 80 chr10 76977124 76977219 -63339546 + L1M4 LINE L1 2388 2487 -3659 * 653 203 50 16 chr10 76977216 76977398 -63339367 - L1MC4 LINE L1 -890 5256 5069 580 174 17 17 chr10 76977398 76977513 -63339252 + AluJb SINE Alu 117 231 -81 1618 151 25 18 chr10 76977714 76978020 -63338745 + AluJb SINE Alu 1 308 0 1879 89 4 0 chr10 76978785 76979020 -63337745 + AluSp SINE Alu 1 236 -77 2530 64 0 3 chr10 76979165 76979463 -63337302 + AluY SINE Alu 1 297 -14 2104 142 0 3 chr10 76979470 76979779 -63336986 + AluJo SINE Alu 1 308 -4 314 170 38 0 chr10 76979922 76979975 -63336790 - MER66A LTR ERV1 -140 338 284 22 0 0 0 chr10 76979979 76980001 -63336764 + AT_rich Low_complexity Low_complexity 1 22 0 345 217 72 0 chr10 76980649 76980732 -63336033 + MER5A DNA MER1_type 2 90 -99 1260 199 131 15 chr10 76981035 76981302 -63335463 - AluJo SINE Alu -14 298 1 1824 192 3 0 chr10 76981361 76981669 -63335096 - AluJo SINE Alu -3 309 1 1301 94 0 0 chr10 76981776 76981936 -63334829 - AluSp SINE Alu -16 297 138 795 170 50 13 chr10 76982012 76982171 -63334594 - MER3 DNA MER1_type -44 165 1 2457 85 0 7 chr10 76982667 76982974 -63333791 + AluSg1 SINE Alu 1 305 -4 2318 92 13 7 chr10 76982985 76983288 -63333477 + AluSg1 SINE Alu 1 305 -4 2057 117 23 7 chr10 76983404 76983712 -63333053 + AluSq SINE Alu 1 313 0 300 237 79 57 chr10 76984354 76984531 -63332234 - L1ME4a LINE L1 -2 6119 5939 2101 100 43 10 chr10 76984533 76984832 -63331933 - AluSx SINE Alu -3 309 1 2575 70 0 3 chr10 76984926 76985238 -63331527 - AluY SINE Alu 0 311 1 866 201 0 18 chr10 76985382 76985546 -63331219 - AluJb SINE Alu -151 161 1 622 234 184 5 chr10 76986442 76986643 -63330122 + MIR SINE MIR 18 254 -8 25 51 0 0 chr10 76986657 76986696 -63330069 + AT_rich Low_complexity Low_complexity 1 39 0 2244 78 3 50 chr10 76986719 76987040 -63329725 - AluY SINE Alu -5 306 1 2340 103 3 0 chr10 76987042 76987344 -63329421 - AluSp SINE Alu -9 304 2 1275 241 27 97 chr10 76987444 76987959 -63328806 - MLT1J LTR MaLR -6 505 27 258 32 0 0 chr10 76988125 76988156 -63328609 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2235 111 0 0 chr10 76988172 76988461 -63328304 - AluSx SINE Alu -23 289 1 837 211 19 0 chr10 76991195 76991356 -63325409 + FAM SINE Alu 1 164 -11 2065 135 0 0 chr10 76991359 76991669 -63325096 + AluSx SINE Alu 1 310 0 1662 160 4 21 chr10 76991676 76991957 -63324808 + AluJb SINE Alu 5 280 -32 189 0 0 0 chr10 76991957 76991978 -63324787 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 189 107 0 0 chr10 76992618 76992646 -63324119 + (T)n Simple_repeat Simple_repeat 1 28 0 2213 90 0 21 chr10 76993013 76993303 -63323462 + AluSg SINE Alu 19 302 -8 2269 107 0 0 chr10 76994922 76995212 -63321553 + AluJb SINE Alu 1 290 -22 2365 102 3 0 chr10 76995873 76996178 -63320587 - AluSp SINE Alu -7 306 1 2271 60 4 4 chr10 76996299 76996568 -63320197 - AluSc SINE Alu -36 273 5 1126 192 21 130 chr10 76997293 76997476 -63319289 - AluYb8 SINE Alu -7 301 170 2319 92 0 0 chr10 76997476 76997768 -63318997 - AluSg SINE Alu -18 292 1 1126 192 21 130 chr10 76997768 76997922 -63318843 - AluYb8 SINE Alu -138 170 1 284 232 0 0 chr10 76997937 76997993 -63318772 + L1MEc LINE L1 35 90 -6306 182 347 0 27 chr10 76998024 76998099 -63318666 - L3 LINE CR1 -495 1082 1010 2270 80 0 3 chr10 76998423 76998709 -63318056 - AluSg SINE Alu -23 287 3 416 141 0 14 chr10 76998759 76998830 -63317935 - AluS SINE Alu -14 295 226 835 71 0 0 chr10 76998830 76998929 -63317836 - AluS SINE Alu -213 99 1 2272 100 7 3 chr10 76998946 76999247 -63317518 - AluSq SINE Alu -11 302 1 210 282 56 14 chr10 76999418 76999489 -63317276 + L2 LINE L2 3231 3304 -9 1928 137 12 40 chr10 76999615 76999936 -63316829 - AluJb SINE Alu 0 312 1 2484 79 3 0 chr10 77000778 77001081 -63315684 + AluSx SINE Alu 1 304 -8 509 158 147 0 chr10 77001684 77001779 -63314986 + AluJb SINE Alu 2 110 -202 1555 80 30 0 chr10 77001782 77001981 -63314784 - PABL_A LTR ERV1 0 660 456 557 270 60 13 chr10 77001993 77002260 -63314505 - LTR16B LTR ERVL -163 301 1 335 273 86 29 chr10 77002340 77002479 -63314286 - MER103 DNA DNA -19 147 1 227 139 0 0 chr10 77003474 77003510 -63313255 + MIR SINE MIR 150 185 -77 1169 132 0 0 chr10 77003510 77003677 -63313088 + AluSg/x SINE Alu 129 295 -15 241 280 67 0 chr10 77003683 77003758 -63313007 + MIR SINE MIR 179 258 -4 2292 101 3 3 chr10 77003853 77004150 -63312615 + AluSp SINE Alu 1 297 -16 303 28 0 0 chr10 77004152 77004188 -63312577 + (CAGGG)n Simple_repeat Simple_repeat 2 37 0 1606 163 4 8 chr10 77004262 77004513 -63312252 + AluJb SINE Alu 1 250 -62 265 254 0 0 chr10 77004521 77004580 -63312185 + A-rich Low_complexity Low_complexity 2 60 0 2363 90 7 0 chr10 77005047 77005346 -63311419 - AluSq SINE Alu -12 301 1 2005 142 0 10 chr10 77005448 77005751 -63311014 - AluJb SINE Alu -12 300 1 2218 86 0 68 chr10 77005761 77006086 -63310679 - AluSq SINE Alu -9 304 2 312 220 17 0 chr10 77007278 77007353 -63309412 + Zaphod DNA AcHobo 1 77 -616 1176 295 93 20 chr10 77007393 77007800 -63308965 + MER115 DNA AcHobo 29 465 -228 471 236 75 70 chr10 77007858 77008057 -63308708 + MLT1F1-int LTR MaLR 1022 1221 -150 2189 86 20 7 chr10 77008216 77008508 -63308257 + AluSg1 SINE Alu 1 296 -13 1496 193 47 0 chr10 77008511 77008786 -63307979 + MLT1F1 LTR MaLR 1 288 -279 1970 143 0 20 chr10 77009019 77009320 -63307445 - AluSx SINE Alu -17 295 1 953 167 26 6 chr10 77009592 77009748 -63307017 + AluJb SINE Alu 141 299 -13 1251 164 172 0 chr10 77009814 77010058 -63306707 - AluJo SINE Alu -16 286 1 2268 99 7 0 chr10 77010124 77010417 -63306348 + AluSx SINE Alu 1 295 -17 27 29 0 0 chr10 77010873 77010907 -63305858 + AT_rich Low_complexity Low_complexity 1 34 0 2114 117 0 7 chr10 77011131 77011431 -63305334 - AluSx SINE Alu -14 298 1 2291 96 0 20 chr10 77011431 77011772 -63304993 - AluSg SINE Alu 0 310 1 2125 96 0 11 chr10 77011784 77012055 -63304710 - AluSx SINE Alu -44 268 1 1738 122 91 11 chr10 77012976 77013263 -63303502 - AluSg SINE Alu 0 310 1 926 112 0 15 chr10 77013286 77013420 -63303345 - FLAM_C SINE Alu -1 132 1 809 167 248 40 chr10 77014381 77014603 -63302162 - AluJo SINE Alu -44 268 1 2130 112 33 10 chr10 77014620 77014925 -63301840 - AluSx SINE Alu 0 312 1 3365 182 129 16 chr10 77015227 77016000 -63300765 + MER21B LTR ERV1 1 861 -2 2091 195 71 21 chr10 77016012 77016448 -63300317 + MER21B-int LTR ERV1 1 458 -3733 672 230 62 0 chr10 77016443 77016604 -63300161 + MER21B-int LTR ERV1 1405 1575 -2616 * 926 188 56 34 chr10 77016928 77017262 -63299503 - LTR56 LTR ERV1 0 445 113 715 156 57 0 chr10 77017282 77017423 -63299342 - LTR23 LTR ERV1 -286 151 3 230 0 33 0 chr10 77017439 77017469 -63299296 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 2068 98 0 0 chr10 77017481 77017736 -63299029 - AluSq SINE Alu -54 259 5 324 261 23 11 chr10 77017917 77018005 -63298760 + MER21B LTR ERV1 1 89 -774 1779 147 16 33 chr10 77018099 77018405 -63298360 - AluSx SINE Alu -7 305 5 1936 174 64 108 chr10 77018540 77019122 -63297643 + MER21B LTR ERV1 220 775 -88 2106 95 44 17 chr10 77019225 77019519 -63297246 - AluSg SINE Alu -8 302 1 2544 74 0 0 chr10 77019530 77019841 -63296924 - AluY SINE Alu 0 311 1 1206 193 86 35 chr10 77019912 77020202 -63296563 - AluJb SINE Alu -7 305 1 232 254 0 0 chr10 77021429 77021488 -63295277 - L1MC4 LINE L1 -17 8025 7967 186 143 0 0 chr10 77021492 77021527 -63295238 + (T)n Simple_repeat Simple_repeat 1 35 0 334 250 78 31 chr10 77021586 77021714 -63295051 - L1MC5 LINE L1 -271 7690 7557 276 225 178 60 chr10 77021882 77022282 -63294483 - L1MC4 LINE L1 -2 8040 7594 2370 100 10 0 chr10 77024388 77024687 -63292078 - AluSx SINE Alu -10 302 1 241 203 82 0 chr10 77028167 77028246 -63288519 + MIR SINE MIR 75 146 -62 2031 138 7 0 chr10 77028462 77028758 -63288007 - AluSx SINE Alu -13 299 2 1693 144 37 37 chr10 77028765 77029064 -63287701 - AluJb SINE Alu -13 299 1 200 290 108 21 chr10 77029128 77029221 -63287544 + MIR SINE MIR 113 213 -49 2587 66 0 0 chr10 77029358 77029663 -63287102 - AluSg SINE Alu -5 305 1 474 298 53 50 chr10 77031622 77031961 -63284804 - MER102b DNA MER1_type -1 340 1 202 277 48 60 chr10 77032344 77032427 -63284338 + MIR SINE MIR 23 104 -158 966 226 94 26 chr10 77032466 77032756 -63284009 - MLT1E3 LTR MaLR 0 624 355 2446 70 3 3 chr10 77032756 77033058 -63283707 - AluY SINE Alu -9 302 1 2129 119 17 0 chr10 77033058 77033351 -63283414 - AluSx SINE Alu -14 298 1 966 226 94 26 chr10 77033351 77033465 -63283300 - MLT1E3 LTR MaLR -268 356 86 1204 174 0 20 chr10 77033465 77033666 -63283099 + AluJb SINE Alu 18 214 -98 745 143 0 0 chr10 77033666 77033778 -63282987 + AluJb SINE Alu 184 295 -17 1954 149 7 0 chr10 77033780 77034076 -63282689 + AluSx SINE Alu 1 298 -14 200 298 96 10 chr10 77034282 77034386 -63282379 - MIR SINE MIR -79 183 71 282 29 0 0 chr10 77034775 77034810 -63281955 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2085 121 0 3 chr10 77034813 77035095 -63281670 - AluSx SINE Alu -31 281 1 371 228 198 95 chr10 77035133 77035492 -63281273 + LTR67 LTR ERVL 68 463 -94 538 279 165 89 chr10 77035682 77036174 -63280591 + MLT1L LTR MaLR 32 560 -55 193 220 169 0 chr10 77036542 77036601 -63280164 - MIR SINE MIR -58 150 82 249 269 179 58 chr10 77036815 77037072 -63279693 - MLT1I LTR MaLR -29 380 93 310 247 117 56 chr10 77037731 77037893 -63278872 + Charlie8 DNA MER1_type 15 186 -2231 2143 137 0 9 chr10 77038434 77038749 -63278016 + AluSx SINE Alu 1 312 0 902 241 3 82 chr10 77038767 77039049 -63277716 - MIR SINE MIR -1 261 2 800 271 100 11 chr10 77039056 77039337 -63277428 - MLT1J LTR MaLR -177 334 29 351 280 28 0 chr10 77039349 77039464 -63277301 - MIR SINE MIR -65 143 33 212 348 11 0 chr10 77040014 77040103 -63276662 - MIR3 SINE MIR 0 208 119 715 259 119 50 chr10 77040213 77040591 -63276174 + LTR16A1 LTR ERVL 53 456 -1 455 249 97 36 chr10 77040633 77040798 -63275967 + MIR3 SINE MIR 23 197 -11 2137 128 24 0 chr10 77041045 77041342 -63275423 - AluSx SINE Alu -8 304 1 728 281 76 16 chr10 77041358 77041607 -63275158 + MLT1L LTR MaLR 347 610 -5 255 252 16 38 chr10 77042085 77042197 -63274568 + GA-rich Low_complexity Low_complexity 1 109 0 2049 125 0 24 chr10 77043008 77043296 -63273469 + AluSg SINE Alu 1 281 -29 208 0 30 30 chr10 77043299 77043332 -63273433 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1000 264 105 65 chr10 77043333 77043808 -63272957 + MLT1G LTR MaLR 28 529 -61 1904 156 50 71 chr10 77043808 77043953 -63272812 - MLT1C LTR MaLR -1 466 319 2261 128 0 10 chr10 77043953 77044265 -63272500 - AluSx SINE Alu -3 309 1 1904 156 50 71 chr10 77044265 77044595 -63272170 - MLT1C LTR MaLR -148 319 1 1000 264 105 65 chr10 77044595 77044660 -63272105 + MLT1G LTR MaLR 529 590 0 336 348 65 7 chr10 77045057 77045212 -63271553 + L2 LINE L2 3108 3271 -1 303 326 57 16 chr10 77045244 77045437 -63271328 + L1MEd LINE L1 431 631 -5899 1031 261 39 24 chr10 77045514 77045988 -63270777 + L1MEd LINE L1 1306 1668 -4862 1581 193 57 20 chr10 77045993 77046294 -63270471 - AluJo SINE Alu 0 312 1 579 103 10 10 chr10 77046479 77046576 -63270189 + L1MB7 LINE L1 5636 5732 -452 284 178 0 0 chr10 77046576 77046621 -63270144 + AluJo SINE Alu 1 45 -263 318 143 0 0 chr10 77046621 77046670 -63270095 - THE1B LTR MaLR 0 355 307 2052 110 25 7 chr10 77046670 77046982 -63269783 - AluSx SINE Alu 0 326 10 1537 121 46 85 chr10 77047082 77047221 -63269544 - THE1B LTR MaLR -70 294 151 2167 132 0 0 chr10 77047221 77047522 -63269243 + AluSx SINE Alu 1 301 0 1537 121 46 85 chr10 77047522 77047687 -63269078 - THE1B LTR MaLR -213 151 1 1229 167 49 53 chr10 77047687 77047956 -63268809 + AluJo SINE Alu 41 308 0 1986 145 78 31 chr10 77047956 77048008 -63268757 + L1MB7 LINE L1 5736 5784 -400 2199 136 10 0 chr10 77048008 77048317 -63268448 + AluJb SINE Alu 1 312 0 1986 145 78 31 chr10 77048317 77048677 -63268088 + L1MB7 LINE L1 5784 6167 -17 429 317 11 44 chr10 77048703 77048883 -63267882 + L1MEd LINE L1 1922 2095 -4445 2166 111 10 10 chr10 77049074 77049372 -63267393 + AluSq SINE Alu 1 298 -15 733 149 7 64 chr10 77049384 77049525 -63267240 + AluJb SINE Alu 3 135 -177 24 0 0 0 chr10 77049525 77049549 -63267216 + AT_rich Low_complexity Low_complexity 1 24 0 2904 169 21 5 chr10 77049549 77050118 -63266647 + L1MB7 LINE L1 5596 6173 -11 183 42 0 0 chr10 77050218 77050242 -63266523 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 406 187 18 0 chr10 77050251 77050265 -63266500 - L1M4 LINE L1 -1086 5060 5048 2916 7 0 0 chr10 77050265 77050572 -63266193 - AluY SINE Alu -4 307 1 406 187 18 0 chr10 77050572 77050866 -63265899 - L1M4 LINE L1 -1098 5048 4579 1738 242 40 24 chr10 77051111 77051318 -63265447 - LTR16C LTR ERVL -2 489 287 908 157 79 65 chr10 77051318 77051364 -63265401 - MER20 DNA MER1_type 0 219 175 1893 161 18 0 chr10 77051364 77051644 -63265121 - AluSx SINE Alu -27 285 1 908 157 79 65 chr10 77051644 77051813 -63264952 - MER20 DNA MER1_type -44 175 1 1738 242 40 24 chr10 77051813 77052056 -63264709 - LTR16C LTR ERVL -204 287 32 436 206 9 37 chr10 77052486 77052593 -63264172 + MIR3 SINE MIR 81 184 -24 296 312 48 8 chr10 77053776 77053901 -63262864 + MIR SINE MIR 11 140 -122 2104 126 0 7 chr10 77053916 77054210 -63262555 + AluSx SINE Alu 7 298 -14 440 245 28 0 chr10 77054350 77054456 -63262309 - MIR SINE MIR -76 186 78 2198 122 7 0 chr10 77055042 77055345 -63261420 + AluSx SINE Alu 1 305 -7 184 214 0 0 chr10 77055350 77055392 -63261373 - L2 LINE L2 -19 3253 3212 1335 241 108 24 chr10 77055416 77055840 -63260925 - L2 LINE L2 0 3313 2854 2386 76 3 0 chr10 77055840 77056152 -63260613 - AluSq SINE Alu 0 313 1 1279 110 12 0 chr10 77056154 77056327 -63260438 - AluSq SINE Alu -15 298 124 414 288 110 7 chr10 77056332 77056478 -63260287 - MIR SINE MIR -50 212 52 562 158 0 93 chr10 77057422 77057443 -63259322 + L1MB8 LINE L1 6051 6072 -106 2250 104 17 0 chr10 77057443 77057741 -63259024 + AluSx SINE Alu 1 303 -9 562 158 0 93 chr10 77057741 77057858 -63258907 + L1MB8 LINE L1 6072 6176 -2 1751 171 14 3 chr10 77058071 77058363 -63258402 - AluJb SINE Alu -17 295 1 21 57 0 19 chr10 77058370 77058403 -63258362 + AT_rich Low_complexity Low_complexity 1 34 -18 2267 119 0 0 chr10 77058403 77058697 -63258068 + AluSx SINE Alu 1 294 -18 21 57 0 19 chr10 77058697 77058716 -63258049 + AT_rich Low_complexity Low_complexity 34 52 0 896 248 183 19 chr10 77058773 77059200 -63257565 - L1MC5 LINE L1 -51 7910 7414 2664 52 10 0 chr10 77059200 77059505 -63257260 - AluY SINE Alu -3 308 1 354 200 15 85 chr10 77059550 77059680 -63257085 - MLT1J LTR MaLR -66 445 325 902 143 29 19 chr10 77059685 77059875 -63256890 + MER3 DNA MER1_type 1 144 -65 330 181 83 0 chr10 77060248 77060320 -63256445 + MER3 DNA MER1_type 132 209 0 593 218 11 62 chr10 77060419 77060598 -63256167 - MLT1J LTR MaLR -327 184 15 1817 124 72 24 chr10 77060901 77061191 -63255574 - AluJo SINE Alu -8 304 1 1267 220 104 38 chr10 77061282 77061755 -63255010 - MLT1D LTR MaLR -1 504 1 202 259 19 19 chr10 77061831 77061885 -63254880 - MIR SINE MIR -181 81 28 2637 62 0 0 chr10 77061910 77062217 -63254548 - AluY SINE Alu -4 307 1 548 241 63 19 chr10 77063007 77063165 -63253600 - MIR SINE MIR -2 260 96 826 165 0 0 chr10 77063432 77063565 -63253200 - FLAM_C SINE Alu 0 133 1 348 250 70 16 chr10 77063995 77064123 -63252642 + L2 LINE L2 2914 3048 -224 2062 120 17 27 chr10 77064170 77064471 -63252294 - AluSx SINE Alu -14 298 1 2454 93 3 0 chr10 77064554 77064855 -63251910 - AluSp SINE Alu -11 302 1 2641 149 20 16 chr10 77064865 77065367 -63251398 - L1MB3 LINE L1 -6 6177 5674 849 164 26 0 chr10 77065388 77065540 -63251225 - L1ME LINE L1 -396 5770 5615 189 0 0 0 chr10 77065540 77065561 -63251204 + (TA)n Simple_repeat Simple_repeat 2 22 0 1260 134 0 0 chr10 77065561 77065732 -63251033 - AluSg/x SINE Alu -5 307 137 252 207 25 0 chr10 77065736 77065799 -63250966 - L1ME LINE L1 -551 5613 5541 1183 194 95 20 chr10 77067483 77067837 -63248928 - L1ME LINE L1 -609 5557 5175 2214 110 0 0 chr10 77067846 77068154 -63248611 - AluSg SINE Alu -2 308 1 2120 95 0 10 chr10 77068162 77068457 -63248308 - AluSx SINE Alu -20 292 1 2108 200 49 82 chr10 77068457 77069041 -63247724 - L1ME LINE L1 -2064 4082 3520 216 67 0 0 chr10 77069041 77069071 -63247694 + (TG)n Simple_repeat Simple_repeat 1 30 0 2108 200 49 82 chr10 77069071 77069136 -63247629 - L1ME LINE L1 -2626 3520 3454 1082 157 5 51 chr10 77069136 77069353 -63247412 + AluJb SINE Alu 104 310 -2 1940 165 43 3 chr10 77070331 77070682 -63246083 - MLT1A1 LTR MaLR 0 365 1 248 316 0 34 chr10 77070826 77070943 -63245822 + L1ME LINE L1 5599 5711 -410 309 51 0 0 chr10 77071198 77071237 -63245528 + (TG)n Simple_repeat Simple_repeat 1 39 0 183 80 0 0 chr10 77071259 77071284 -63245481 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 534 318 112 44 chr10 77071294 77071678 -63245087 - L2 LINE L2 -34 3238 2829 295 246 14 0 chr10 77071699 77071768 -63244997 + MER94 DNA DNA 1 70 -64 312 278 33 0 chr10 77071792 77071882 -63244883 - L2 LINE L2 -513 2801 2709 1166 256 102 75 chr10 77072665 77073242 -63243523 + MLT1L LTR MaLR 1 593 -22 498 317 104 6 chr10 77073370 77073553 -63243212 + MIR SINE MIR 56 256 -6 182 125 0 25 chr10 77074358 77074398 -63242367 + (GGA)n Simple_repeat Simple_repeat 3 41 0 250 250 15 29 chr10 77074778 77074846 -63241919 + G-rich Low_complexity Low_complexity 4 70 0 312 259 157 0 chr10 77075564 77075672 -63241093 - L2 LINE L2 0 3313 3189 669 232 182 10 chr10 77075784 77075982 -63240783 - MIR SINE MIR -15 247 16 634 253 19 38 chr10 77076254 77076412 -63240353 - MER63 DNA MER1_type -281 781 1 2128 97 7 7 chr10 77076653 77076953 -63239812 + AluSx SINE Alu 1 300 -12 584 306 28 6 chr10 77077169 77077349 -63239416 + MIR SINE MIR 67 250 -12 244 327 114 31 chr10 77078356 77078610 -63238155 - MLT1K LTR MaLR -173 415 141 1461 271 105 43 chr10 77080011 77080187 -63236578 - MLT1G1 LTR MaLR 0 595 431 2439 159 24 44 chr10 77080187 77080252 -63236513 - L1MB3 LINE L1 0 6183 6118 1756 120 75 0 chr10 77080252 77080518 -63236247 - AluSx SINE Alu -26 286 1 2439 159 24 44 chr10 77080518 77080950 -63235815 - L1MB3 LINE L1 -65 6118 5696 1461 271 105 43 chr10 77080950 77081333 -63235432 - MLT1G1 LTR MaLR -164 431 1 751 272 141 96 chr10 77081456 77081982 -63234783 - L3 LINE CR1 -48 1529 969 1837 149 3 0 chr10 77081982 77082271 -63234494 + AluJb SINE Alu 1 290 -22 751 272 141 96 chr10 77082271 77082361 -63234404 - L3 LINE CR1 -608 969 885 715 310 91 27 chr10 77082939 77083345 -63233420 - MLT1K LTR MaLR -6 582 151 318 106 0 0 chr10 77084288 77084335 -63232430 + (TG)n Simple_repeat Simple_repeat 2 48 0 181 200 211 22 chr10 77084512 77084602 -63232163 - MIR SINE MIR -84 124 18 332 271 12 48 chr10 77085304 77085470 -63231295 + G-rich Low_complexity Low_complexity 5 164 0 23 78 0 0 chr10 77085827 77085878 -63230887 + GC_rich Low_complexity Low_complexity 1 51 0 225 133 22 22 chr10 77087412 77087457 -63229308 + GA-rich Low_complexity Low_complexity 2 46 0 505 333 40 25 chr10 77087646 77087970 -63228795 + L2 LINE L2 2811 3139 -133 437 265 78 0 chr10 77088017 77088119 -63228646 - L2 LINE L2 -1 3312 3203 498 154 114 0 chr10 77088367 77088490 -63228275 - L1ME3A LINE L1 -5 6165 6029 493 226 39 18 chr10 77088595 77088765 -63228000 - L1MB8 LINE L1 0 6178 5998 180 111 0 0 chr10 77088768 77088795 -63227970 + (CCCCAG)n Simple_repeat Simple_repeat 4 30 0 3145 166 21 5 chr10 77088829 77089409 -63227356 - L1MB7 LINE L1 0 6184 5596 24 0 0 0 chr10 77089409 77089433 -63227332 + AT_rich Low_complexity Low_complexity 1 24 0 769 149 7 64 chr10 77089433 77089574 -63227191 - AluJb SINE Alu -177 135 3 2045 125 3 0 chr10 77089586 77089883 -63226882 - AluSq SINE Alu -15 298 1 511 196 3 30 chr10 77089883 77090011 -63226754 - L1M4 LINE L1 -1132 5014 4895 * 575 256 54 16 chr10 77089988 77090230 -63226535 - L1M3c LINE L1 -3522 3435 3185 8167 81 3 10 chr10 77090266 77091331 -63225434 - MER11C LTR ERVK -14 1057 1 2208 113 0 0 chr10 77091346 77091656 -63225109 - AluSg SINE Alu 0 310 1 2482 250 60 30 chr10 77091656 77091894 -63224871 - L1M3c LINE L1 -3762 3195 2965 2012 120 10 3 chr10 77091894 77092193 -63224572 - AluSx SINE Alu -11 301 1 2482 250 60 30 chr10 77092193 77093158 -63223607 - L1M3c LINE L1 -3992 2965 1977 303 271 95 29 chr10 77093490 77093700 -63223065 - L1M3c LINE L1 -6604 255 32 294 317 92 17 chr10 77094323 77094443 -63222322 - L2 LINE L2 0 3313 3185 2262 98 0 0 chr10 77094484 77094781 -63221984 - AluSx SINE Alu -10 302 6 27 29 0 0 chr10 77095710 77095744 -63221021 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 77095762 77095784 -63220981 + AT_rich Low_complexity Low_complexity 1 22 0 4713 179 23 35 chr10 77096147 77097222 -63219543 - L1MB3 LINE L1 -1 6182 5096 15138 113 7 75 chr10 77097222 77098448 -63218317 + Tigger1 DNA MER2_type 2 1309 -1109 1727 150 0 14 chr10 77098448 77098742 -63218023 + AluJo SINE Alu 1 290 -22 15138 113 7 75 chr10 77098742 77099488 -63217277 + Tigger1 DNA MER2_type 1309 1760 -658 1746 167 7 10 chr10 77099488 77099794 -63216971 - AluJb SINE Alu -7 305 1 15138 113 7 75 chr10 77099794 77100411 -63216354 + Tigger1 DNA MER2_type 1760 2417 -1 4713 179 23 35 chr10 77100411 77100758 -63216007 - L1MB3 LINE L1 -1087 5096 2635 2532 226 64 32 chr10 77100792 77101641 -63215124 + L1MDa LINE L1 19 1127 -5413 3572 84 2 0 chr10 77101641 77102093 -63214672 - MLT2A2 LTR ERVL 0 453 1 2532 226 64 32 chr10 77102093 77102207 -63214558 + L1MDa LINE L1 1127 1236 -5304 857 140 29 64 chr10 77102217 77102388 -63214377 + AluSx SINE Alu 24 188 -124 532 47 0 0 chr10 77102396 77102460 -63214305 + THE1B LTR MaLR 292 355 -9 307 225 172 80 chr10 77102594 77102745 -63214020 - AluJb SINE Alu -98 204 40 608 147 0 0 chr10 77102749 77102844 -63213921 + AluJb SINE Alu 205 299 -13 1755 184 27 70 chr10 77102864 77103421 -63213344 + L1MDa LINE L1 1262 1794 -4746 2295 120 49 6 chr10 77103421 77103770 -63212995 + THE1B LTR MaLR 1 364 0 1755 184 27 70 chr10 77103770 77103798 -63212967 + L1MDa LINE L1 1794 1822 -4718 1733 262 106 21 chr10 77103800 77104509 -63212256 + L1M3c LINE L1 1356 2167 -5329 1108 151 80 24 chr10 77104560 77104772 -63211993 + L1M3c LINE L1 2315 2538 -4958 905 36 0 0 chr10 77104772 77104882 -63211883 + AluY SINE Alu 197 306 -5 3568 216 114 35 chr10 77104883 77105698 -63211067 + L1M3c LINE L1 2205 2955 -4610 1911 166 0 0 chr10 77105698 77105999 -63210766 + AluJo SINE Alu 1 301 -11 3568 216 114 35 chr10 77105999 77106971 -63209794 + L1M3c LINE L1 2955 4169 -3396 1696 177 7 13 chr10 77106971 77107271 -63209494 - AluJo SINE Alu -4 308 11 3568 216 114 35 chr10 77107271 77107550 -63209215 + L1M3c LINE L1 4169 4425 -3140 1896 156 0 0 chr10 77107560 77107862 -63208903 - AluJo SINE Alu -10 302 1 376 247 31 62 chr10 77107871 77107886 -63208879 - MSTC LTR MaLR -350 78 64 2328 78 0 25 chr10 77107886 77108205 -63208560 - AluY SINE Alu 0 311 1 376 247 31 62 chr10 77108205 77108286 -63208479 - MSTC LTR MaLR -364 64 1 767 163 35 41 chr10 77108286 77108334 -63208431 + L1MA9 LINE L1 6053 6100 -212 2095 112 3 0 chr10 77108334 77108620 -63208145 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr10 77108620 77108647 -63208118 + (CATA)n Simple_repeat Simple_repeat 2 28 0 767 163 35 41 chr10 77108647 77108769 -63207996 + L1MA9 LINE L1 6098 6223 -89 253 333 29 34 chr10 77108937 77109144 -63207621 - L1MCc LINE L1 -4955 1468 1263 237 292 22 34 chr10 77109547 77109636 -63207129 - L1MCc LINE L1 -5977 954 867 782 284 38 13 chr10 77109636 77109810 -63206955 + MIR SINE MIR 18 201 -61 186 43 0 0 chr10 77109810 77109833 -63206932 + (TG)n Simple_repeat Simple_repeat 2 24 0 782 284 38 13 chr10 77109833 77109897 -63206868 + MIR SINE MIR 201 262 0 714 276 18 0 chr10 77110010 77110180 -63206585 + MER5B DNA MER1_type 6 178 0 2498 61 0 0 chr10 77112015 77112325 -63204440 + AluY SINE Alu 1 310 -1 211 259 19 19 chr10 77112350 77112404 -63204361 + MIR SINE MIR 28 81 -181 1359 216 104 38 chr10 77112480 77112953 -63203812 + MLT1D LTR MaLR 1 504 -1 1685 123 72 24 chr10 77113044 77113336 -63203429 + AluJo SINE Alu 1 306 -6 614 218 11 62 chr10 77113639 77113818 -63202947 + MLT1J LTR MaLR 15 184 -327 347 181 83 0 chr10 77113917 77113989 -63202776 - MER3 DNA MER1_type 0 209 132 948 143 29 19 chr10 77114365 77114555 -63202210 - MER3 DNA MER1_type -43 166 1 375 200 15 85 chr10 77114560 77114690 -63202075 + MLT1J LTR MaLR 325 445 -66 2503 52 10 0 chr10 77114735 77115040 -63201725 + AluY SINE Alu 1 308 -3 940 248 183 19 chr10 77115040 77115467 -63201298 + L1MC5 LINE L1 7414 7910 -51 2043 102 24 17 chr10 77115541 77115834 -63200931 - AluSx SINE Alu -17 295 1 276 284 23 0 chr10 77116273 77116361 -63200404 - L3 LINE CR1 -411 1166 1077 1496 231 65 10 chr10 77116385 77116858 -63199907 - MLT1G LTR MaLR 0 530 22 2282 72 3 0 chr10 77116913 77117204 -63199561 - AluY SINE Alu -19 292 1 1690 185 0 3 chr10 77117925 77118222 -63198543 + AluJo SINE Alu 1 296 -16 563 194 0 73 chr10 77118339 77118463 -63198302 - MIR SINE MIR -127 135 21 272 156 125 16 chr10 77118592 77118656 -63198109 + MIR SINE MIR 112 182 -80 824 290 104 36 chr10 77120216 77120581 -63196184 + MLT1K LTR MaLR 2 391 -197 2338 67 0 16 chr10 77120801 77121115 -63195650 - AluY SINE Alu -2 309 1 460 157 24 0 chr10 77121138 77121221 -63195544 - MER96 DNA MER1_type? -90 85 1 334 296 175 19 chr10 77121801 77122007 -63194758 + MIR SINE MIR 23 260 -2 195 274 20 0 chr10 77122609 77122660 -63194105 - L3 LINE CR1 -155 1422 1371 1979 135 7 0 chr10 77123867 77124163 -63192602 + AluJo SINE Alu 4 301 -11 824 181 18 0 chr10 77124164 77124330 -63192435 + L1MDa LINE L1 1954 2122 -4418 609 110 0 0 chr10 77124332 77124423 -63192342 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 2412 178 59 17 chr10 77124425 77124443 -63192322 + L1MDa LINE L1 2105 2121 -4572 1644 161 42 21 chr10 77124443 77124729 -63192036 - AluJb SINE Alu -20 292 1 2412 178 59 17 chr10 77124729 77125342 -63191423 + L1MDa LINE L1 2121 2803 -3890 1355 193 40 118 chr10 77125310 77125675 -63191090 + L1MDa LINE L1 3776 4168 -2372 * 2187 113 3 0 chr10 77125675 77125984 -63190781 + AluSx SINE Alu 1 310 -2 1355 193 40 118 chr10 77125984 77126011 -63190754 + L1MDa LINE L1 4168 4196 -2344 881 141 0 15 chr10 77126011 77126146 -63190619 + FLAM_C SINE Alu 1 133 0 1355 193 40 118 chr10 77126146 77126370 -63190395 + L1MDa LINE L1 4196 4345 -2195 353 83 0 0 chr10 77126368 77126416 -63190349 + L1MD1 LINE L1 6117 6164 -78 * 2449 143 59 5 chr10 77126416 77126821 -63189944 + MSTA LTR MaLR 1 427 -1 3247 167 11 2 chr10 77126822 77127406 -63189359 + MSTA-int LTR MaLR 1 548 -1032 249 300 0 17 chr10 77127447 77127567 -63189198 - L1MEc LINE L1 -4184 2031 1914 2120 92 7 3 chr10 77127603 77127897 -63188868 - AluSc SINE Alu -14 295 1 1644 157 3 37 chr10 77128023 77128317 -63188448 + AluJo SINE Alu 1 284 -28 186 43 0 0 chr10 77128317 77128340 -63188425 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 2477 199 64 53 chr10 77128345 77129194 -63187571 - L1ME1 LINE L1 -263 5903 5282 1973 95 41 7 chr10 77129194 77129489 -63187276 + AluSq SINE Alu 1 305 -8 2477 199 64 53 chr10 77129489 77129784 -63186981 - L1ME1 LINE L1 -884 5282 4992 1615 170 9 28 chr10 77129784 77130102 -63186663 - AluJo SINE Alu 0 312 1 1008 156 74 15 chr10 77130142 77130795 -63185970 - L1MB7 LINE L1 -14 6170 4769 854 209 0 12 chr10 77130805 77130968 -63185797 - FRAM SINE Alu -16 160 1 2125 197 62 40 chr10 77130968 77131338 -63185427 - L1MB7 LINE L1 -1373 4773 4413 963 175 6 6 chr10 77131338 77131498 -63185267 - FRAM SINE Alu -6 160 1 2125 197 62 40 chr10 77131498 77131514 -63185251 - L1MB7 LINE L1 -1733 4413 4399 557 125 0 0 chr10 77131514 77131594 -63185171 - MADE1 DNA Mariner 0 80 1 2125 197 62 40 chr10 77131594 77131785 -63184980 - L1MB7 LINE L1 -1747 4399 4182 502 269 101 22 chr10 77131759 77131848 -63184917 - L1MEc LINE L1 -4585 1811 1730 * 189 0 0 0 chr10 77131848 77131869 -63184896 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 502 269 101 22 chr10 77131869 77132136 -63184629 - L1MEc LINE L1 -4666 1730 1427 * 13936 145 27 52 chr10 77132120 77132178 -63184587 - L1MA5 LINE L1 0 6300 6242 1571 114 85 50 chr10 77132178 77132459 -63184306 - AluSx SINE Alu -21 291 1 13936 145 27 52 chr10 77132459 77134217 -63182548 - L1MA5 LINE L1 -58 6242 4442 2371 79 0 3 chr10 77134217 77134522 -63182243 - AluSx SINE Alu -8 304 1 13936 145 27 52 chr10 77134522 77134924 -63181841 - L1MA5 LINE L1 -1858 4442 4031 1614 162 0 49 chr10 77134924 77135252 -63181513 - AluJo SINE Alu 0 312 1 13936 145 27 52 chr10 77135252 77136920 -63179845 - L1MA5 LINE L1 -2269 4031 2504 1029 166 30 20 chr10 77136921 77137120 -63179645 - AluJo SINE Alu -8 304 104 250 94 0 0 chr10 77137122 77137154 -63179611 + U2 snRNA snRNA 2 33 -155 655 191 0 0 chr10 77137154 77137259 -63179506 - FLAM_A SINE Alu -25 117 13 1215 163 28 4 chr10 77137273 77137524 -63179241 - L1MA5 LINE L1 -3628 2518 2262 724 253 81 25 chr10 77137523 77137931 -63178834 - L1MEc LINE L1 -4927 1469 1039 * 6318 59 15 39 chr10 77137944 77138870 -63177895 - SVA Other Other 0 1386 483 22 0 0 0 chr10 77139110 77139132 -63177633 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 77139515 77139536 -63177229 + AT_rich Low_complexity Low_complexity 1 21 0 347 203 14 14 chr10 77139925 77139999 -63176766 + MER20B DNA MER1_type 134 207 -576 380 176 176 39 chr10 77139999 77140101 -63176664 - MER91C DNA MER1_type -23 117 2 1664 250 66 13 chr10 77140107 77140639 -63176126 + MER20B DNA MER1_type 209 768 -15 2267 91 3 0 chr10 77141548 77141846 -63174919 - AluSg SINE Alu -11 299 1 887 242 39 39 chr10 77141964 77142220 -63174545 + MIR SINE MIR 2 257 -5 369 284 43 37 chr10 77142588 77142750 -63174015 + MER117 DNA MER1_type 9 171 -26 1138 210 179 0 chr10 77143160 77143422 -63173343 + LTR16C LTR ERVL 183 491 0 467 246 78 63 chr10 77145358 77145626 -63171139 + L1MC4a LINE L1 5748 6019 -102 2376 113 27 21 chr10 77145678 77146051 -63170714 + THE1C LTR MaLR 1 375 0 1834 108 0 0 chr10 77146198 77146448 -63170317 + AluSx SINE Alu 14 263 -49 387 0 0 0 chr10 77146460 77146503 -63170262 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2374 93 0 0 chr10 77146899 77147209 -63169556 + AluSg SINE Alu 1 310 0 2185 94 0 7 chr10 77148325 77148632 -63168133 - AluSx SINE Alu -7 305 1 228 178 22 0 chr10 77149389 77149434 -63167331 + GA-rich Low_complexity Low_complexity 4 49 0 686 269 148 19 chr10 77149492 77149879 -63166886 + LTR16A LTR ERVL 33 457 0 459 253 105 24 chr10 77150004 77150206 -63166559 + MIR SINE MIR 11 235 -27 1507 167 43 0 chr10 77150432 77150738 -63166027 + AluSx SINE Alu 1 318 0 686 310 204 21 chr10 77150762 77151184 -63165581 + L2 LINE L2 2815 3313 0 426 233 49 86 chr10 77151457 77151533 -63165232 + MER103 DNA DNA 8 85 -81 2044 110 0 7 chr10 77151533 77151823 -63164942 - AluY SINE Alu -23 288 1 426 233 49 86 chr10 77151823 77151909 -63164856 + MER103 DNA DNA 85 164 -2 1951 143 0 0 chr10 77151915 77152215 -63164550 - AluSx SINE Alu -9 303 4 242 305 25 100 chr10 77152285 77152485 -63164280 - MIR3 SINE MIR -19 189 5 1916 104 80 58 chr10 77152724 77152763 -63164002 - THE1C LTR MaLR -2 373 336 2086 126 7 0 chr10 77152763 77153072 -63163693 + AluSx SINE Alu 1 311 -1 1916 104 80 58 chr10 77153072 77153397 -63163368 - THE1C LTR MaLR -39 336 1 1103 154 11 0 chr10 77153400 77153582 -63163183 + MER5A DNA MER1_type 6 189 0 2536 95 43 75 chr10 77154187 77154629 -63162136 - MSTA LTR MaLR 0 428 1 21 57 0 0 chr10 77155556 77155591 -63161174 + AT_rich Low_complexity Low_complexity 1 35 0 613 236 42 14 chr10 77156692 77156836 -63159929 - MIR SINE MIR -87 175 28 1314 223 109 56 chr10 77157430 77157611 -63159154 + MLT1J LTR MaLR 21 191 -320 1509 179 18 14 chr10 77157611 77157924 -63158841 - AluJb SINE Alu 0 314 1 1314 223 109 56 chr10 77157924 77158118 -63158647 + MLT1J LTR MaLR 191 417 -94 1843 145 36 10 chr10 77158207 77158511 -63158254 - AluSx SINE Alu 0 312 1 231 263 105 11 chr10 77160117 77160212 -63156553 - L2 LINE L2 0 3272 3169 212 200 14 0 chr10 77160646 77160716 -63156049 + (CA)n Simple_repeat Simple_repeat 2 72 0 266 296 0 0 chr10 77160742 77160830 -63155935 + (CA)n Simple_repeat Simple_repeat 1 88 0 1204 237 94 18 chr10 77161704 77162197 -63154568 - MLT1G1 LTR MaLR 0 595 3 434 238 309 40 chr10 77162521 77162845 -63153920 + MLT1J LTR MaLR 93 503 -8 426 292 86 88 chr10 77163007 77163463 -63153302 + L2 LINE L2 2804 3258 -14 804 290 9 13 chr10 77163704 77163928 -63152837 + MIR SINE MIR 28 250 -12 1036 202 29 19 chr10 77164632 77164840 -63151925 + MER63A DNA MER1_type 1 210 0 751 222 35 66 chr10 77164919 77165117 -63151648 + MIR SINE MIR 2 193 -69 2168 109 0 0 chr10 77165852 77166145 -63150620 + AluSx SINE Alu 1 293 -19 1496 231 65 10 chr10 77166200 77166673 -63150092 + MLT1G LTR MaLR 22 590 0 276 284 23 0 chr10 77166697 77166785 -63149980 + L3 LINE CR1 1077 1166 -411 1940 106 25 21 chr10 77167224 77167532 -63149233 + AluSx SINE Alu 1 309 0 184 30 61 0 chr10 77167624 77167657 -63149108 + T-rich Low_complexity Low_complexity 2 36 0 1531 187 18 7 chr10 77167659 77167937 -63148828 - AluJo SINE Alu -30 282 2 418 248 33 0 chr10 77167938 77168070 -63148695 - L1M4 LINE L1 -2657 3489 3354 608 295 46 25 chr10 77170356 77170597 -63146168 - MIR SINE MIR -6 256 11 2120 118 3 0 chr10 77170897 77171194 -63145571 + AluSx SINE Alu 1 298 -14 411 278 75 54 chr10 77171238 77171515 -63145250 + L1MC4a LINE L1 5655 5934 -187 1703 164 20 20 chr10 77171515 77171819 -63144946 + AluJo SINE Alu 1 304 -8 411 278 75 54 chr10 77171819 77171911 -63144854 + L1MC4a LINE L1 5934 6023 -98 482 224 56 8 chr10 77171958 77172083 -63144682 - MER94 DNA DNA -3 131 1 379 363 19 13 chr10 77172358 77172515 -63144250 - MER5A DNA MER1_type -22 167 10 512 191 92 15 chr10 77172713 77172844 -63143921 + MIR SINE MIR 13 153 -109 23 54 0 0 chr10 77172884 77172921 -63143844 + AT_rich Low_complexity Low_complexity 1 37 0 1285 254 66 46 chr10 77172925 77173512 -63143253 + L1MC4 LINE L1 7444 8042 0 2460 59 0 3 chr10 77173557 77173861 -63142904 + AluY SINE Alu 1 303 -8 1783 121 3 46 chr10 77173871 77174007 -63142758 + AluSx SINE Alu 1 141 -171 2193 119 7 0 chr10 77174007 77174317 -63142448 + AluSx SINE Alu 1 312 0 1783 121 3 46 chr10 77174317 77174486 -63142279 + AluSx SINE Alu 141 293 -19 245 286 202 12 chr10 77174487 77174655 -63142110 + L1ME3A LINE L1 5966 6165 -5 554 276 6 18 chr10 77175197 77175367 -63141398 - MIR SINE MIR -3 259 92 338 146 18 0 chr10 77175369 77175424 -63141341 - MER45A DNA AcHobo 0 178 123 1080 123 0 83 chr10 77175424 77175628 -63141137 + AluJo SINE Alu 1 187 -125 1800 144 13 35 chr10 77175630 77175943 -63140822 + AluJb SINE Alu 2 307 -5 180 176 0 0 chr10 77175956 77175990 -63140775 + A-rich Low_complexity Low_complexity 3 36 0 528 234 58 15 chr10 77175990 77176127 -63140638 - MER45A DNA AcHobo -35 143 1 341 253 13 0 chr10 77176138 77176217 -63140548 - MIR SINE MIR -180 82 3 2145 116 0 0 chr10 77176705 77177008 -63139757 - AluSg SINE Alu 0 310 8 561 301 89 63 chr10 77177619 77178001 -63138764 - MLT1J LTR MaLR -8 503 112 339 316 26 9 chr10 77179288 77179402 -63137363 + L2 LINE L2 2963 3078 -194 250 191 257 9 chr10 77179468 77179573 -63137192 - L2 LINE L2 0 3313 3183 479 253 237 16 chr10 77179871 77180057 -63136708 + LTR16A LTR ERVL 217 443 -7 316 277 0 7 chr10 77180082 77180170 -63136595 + MER91A DNA MER1_type 108 187 -3 1818 161 177 36 chr10 77181079 77181267 -63135498 + LTR54 LTR ERV1 1 161 -349 1496 149 10 56 chr10 77181267 77181569 -63135196 + AluJb SINE Alu 5 292 -20 1818 161 177 36 chr10 77181569 77181827 -63134938 + LTR54 LTR ERV1 161 510 0 2458 55 0 10 chr10 77181936 77182245 -63134520 - AluY SINE Alu -5 306 1 181 200 0 25 chr10 77183063 77183103 -63133662 - L2 LINE L2 -86 3186 3148 1273 256 7 36 chr10 77183113 77183444 -63133321 - LTR40b LTR ERVL 0 462 195 629 103 21 10 chr10 77183444 77183541 -63133224 + MER4A LTR ERV1 1 98 -566 1304 124 196 109 chr10 77183541 77183872 -63132893 + MER4A LTR ERV1 261 620 -44 1959 119 0 29 chr10 77183872 77184182 -63132583 - AluSq SINE Alu -10 303 3 1977 118 3 57 chr10 77184183 77184514 -63132251 - AluSq SINE Alu 0 313 1 570 213 201 0 chr10 77184590 77184759 -63132006 - LTR40a LTR ERVL -316 203 1 710 186 8 8 chr10 77184807 77184931 -63131834 - FLAM_C SINE Alu -19 124 1 2274 101 0 13 chr10 77185137 77185453 -63131312 - AluSx SINE Alu 0 312 1 717 175 48 0 chr10 77185457 77185583 -63131182 - FLAM_A SINE Alu 0 133 2 424 357 83 30 chr10 77185687 77186023 -63130742 - L2 LINE L2 -834 2480 2127 1709 133 93 7 chr10 77186031 77186310 -63130455 - AluSg SINE Alu -7 303 1 1205 151 10 0 chr10 77186481 77186673 -63130092 - AluJb SINE Alu -116 196 3 21 0 0 0 chr10 77186673 77186694 -63130071 + AT_rich Low_complexity Low_complexity 1 21 0 2081 107 3 13 chr10 77187363 77187663 -63129102 - AluSx SINE Alu -15 297 1 222 333 0 0 chr10 77188088 77188166 -63128599 - MIR SINE MIR -1 261 184 293 215 21 21 chr10 77188363 77188456 -63128309 + MER113 DNA MER1_type? 135 227 -294 272 352 11 0 chr10 77188727 77188815 -63127950 + MIR3 SINE MIR 98 186 -22 2289 216 72 46 chr10 77188886 77188976 -63127789 + MLT1E3 LTR MaLR 1 87 -537 2225 73 17 0 chr10 77188976 77189264 -63127501 - AluSg SINE Alu -13 297 5 1956 132 0 17 chr10 77189273 77189569 -63127196 - AluJb SINE Alu -21 291 1 2289 216 72 46 chr10 77189569 77190076 -63126689 + MLT1E3 LTR MaLR 94 624 0 1033 257 82 54 chr10 77190610 77190661 -63126104 + MLT1J LTR MaLR 21 69 -442 1513 176 53 58 chr10 77190661 77191037 -63125728 - MLT1A2 LTR MaLR 0 374 1 1033 257 82 54 chr10 77191037 77191463 -63125302 + MLT1J LTR MaLR 69 511 0 209 167 42 0 chr10 77191645 77191693 -63125072 + CT-rich Low_complexity Low_complexity 2 51 0 356 367 99 31 chr10 77191694 77191988 -63124777 - L2 LINE L2 -16 3256 2943 234 158 0 0 chr10 77192002 77192040 -63124725 + MIR SINE MIR 120 157 -105 219 288 64 48 chr10 77192154 77192279 -63124486 - MIR3 SINE MIR -79 129 3 432 323 114 9 chr10 77192702 77192922 -63123843 - MIR SINE MIR -14 248 6 461 236 112 12 chr10 77193297 77193458 -63123307 + L1MC5 LINE L1 7747 7923 -38 2104 128 6 6 chr10 77193460 77193772 -63122993 + AluSx SINE Alu 1 312 0 232 308 117 8 chr10 77193828 77193948 -63122817 + MER5B DNA MER1_type 46 178 0 * 355 234 12 105 chr10 77193948 77194039 -63122726 + MIR SINE MIR 65 136 -126 828 66 0 0 chr10 77194039 77194145 -63122620 - L1PA13 LINE L1 -16 6147 6042 355 234 12 105 chr10 77194145 77194205 -63122560 + MIR SINE MIR 136 200 -62 189 107 0 0 chr10 77197096 77197124 -63119641 + (TGGGGG)n Simple_repeat Simple_repeat 4 31 0 186 143 0 0 chr10 77197897 77197932 -63118833 + (T)n Simple_repeat Simple_repeat 1 35 0 214 169 17 51 chr10 77198565 77198624 -63118141 + C-rich Low_complexity Low_complexity 4 60 0 * 221 158 0 53 chr10 77198580 77198637 -63118128 + CT-rich Low_complexity Low_complexity 4 57 0 240 122 0 0 chr10 77199965 77200006 -63116759 + (CCG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr10 77200124 77200154 -63116611 + GC_rich Low_complexity Low_complexity 1 30 0 240 59 0 0 chr10 77201223 77201257 -63115508 + (CCG)n Simple_repeat Simple_repeat 3 36 0 22 0 0 0 chr10 77201762 77201784 -63114981 + GC_rich Low_complexity Low_complexity 1 22 0 219 170 0 0 chr10 77202574 77202621 -63114144 + GA-rich Low_complexity Low_complexity 6 52 0 233 342 17 8 chr10 77205583 77205703 -63111062 + CT-rich Low_complexity Low_complexity 1 121 0 22 35 0 0 chr10 77207989 77208018 -63108747 + GC_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr10 77208162 77208195 -63108570 + GC_rich Low_complexity Low_complexity 1 33 0 27 49 0 0 chr10 77209564 77209605 -63107160 + GC_rich Low_complexity Low_complexity 1 41 0 551 274 57 0 chr10 77209977 77210134 -63106631 - MIR SINE MIR -3 259 94 538 275 140 30 chr10 77210403 77210881 -63105884 + L2 LINE L2 2654 3188 -84 234 346 105 8 chr10 77211323 77211456 -63105309 + L2 LINE L2 2613 2758 -556 31 0 0 0 chr10 77211856 77211887 -63104878 + AT_rich Low_complexity Low_complexity 1 31 0 1789 144 0 0 chr10 77211906 77212170 -63104595 - AluJb SINE Alu -27 285 22 351 259 123 29 chr10 77212185 77212355 -63104410 - L1ME LINE L1 -311 5810 5625 312 308 82 88 chr10 77212561 77213016 -63103749 + MLT1L LTR MaLR 110 504 -7 201 39 0 0 chr10 77213052 77213078 -63103687 + (CAA)n Simple_repeat Simple_repeat 2 27 0 262 285 90 28 chr10 77213104 77213248 -63103517 - MARNA DNA Mariner -148 438 286 522 276 0 8 chr10 77213664 77213791 -63102974 + LTR67 LTR ERVL 429 554 -3 257 330 78 0 chr10 77214013 77214116 -63102649 - MIR SINE MIR -14 248 138 1780 150 14 3 chr10 77214682 77214969 -63101796 + AluJo SINE Alu 1 290 -22 2108 112 10 13 chr10 77215808 77216113 -63100652 - AluSx SINE Alu -8 304 1 755 255 86 25 chr10 77216297 77216540 -63100225 + MIR SINE MIR 5 262 0 495 142 80 18 chr10 77216862 77216975 -63099790 - MIR SINE MIR -70 192 73 257 301 161 21 chr10 77217119 77217312 -63099453 + L1ME4a LINE L1 5846 6065 -56 549 198 18 0 chr10 77218878 77218989 -63097776 + L2 LINE L2 1885 1997 -1317 1345 267 92 45 chr10 77219007 77219745 -63097020 - L1MC4 LINE L1 -2 8040 7268 2189 107 0 0 chr10 77219756 77220056 -63096709 - AluSx SINE Alu -12 300 1 231 219 177 42 chr10 77220056 77220152 -63096613 - L1MC4a LINE L1 -597 7211 7103 837 275 134 0 chr10 77220154 77220445 -63096320 + L2 LINE L2 1984 2313 -1001 651 127 18 45 chr10 77220527 77220637 -63096128 + FRAM SINE Alu 45 151 -25 2272 89 0 3 chr10 77220673 77220976 -63095789 + AluSx SINE Alu 1 302 -10 203 180 16 49 chr10 77220976 77221037 -63095728 + L2 LINE L2 2331 2389 -925 664 242 147 61 chr10 77221043 77221070 -63095695 - L2 LINE L2 0 3313 3290 1691 152 3 25 chr10 77221070 77221386 -63095379 + AluJb SINE Alu 1 309 -3 664 242 147 61 chr10 77221386 77221651 -63095114 - L2 LINE L2 -23 3290 2996 1094 253 158 62 chr10 77221658 77221889 -63094876 + L2 LINE L2 2414 2621 -692 2246 102 0 0 chr10 77221889 77222193 -63094572 - AluSg SINE Alu -6 304 1 2384 82 0 0 chr10 77222203 77222508 -63094257 - AluSc SINE Alu -4 305 1 1094 253 158 62 chr10 77222508 77222584 -63094181 + L2 LINE L2 2629 2696 -617 1673 171 0 10 chr10 77222584 77222882 -63093883 + AluJb SINE Alu 15 309 -3 1094 253 158 62 chr10 77222882 77223249 -63093516 + L2 LINE L2 2696 3180 -133 1433 154 61 17 chr10 77223249 77223542 -63093223 - AluJb SINE Alu -6 306 1 1094 253 158 62 chr10 77223542 77223690 -63093075 + L2 LINE L2 3180 3312 -1 1942 142 7 0 chr10 77223934 77224230 -63092535 - AluSx SINE Alu -14 298 1 386 280 68 8 chr10 77224565 77224683 -63092082 + L2 LINE L2 2938 3062 -251 360 231 39 0 chr10 77224699 77224777 -63091988 + MER91A DNA MER1_type 22 102 -94 578 278 72 65 chr10 77224815 77225078 -63091687 + L2 LINE L2 3049 3313 0 573 171 75 53 chr10 77225092 77225181 -63091584 - L1MA4 LINE L1 -1 6299 6213 1698 162 0 30 chr10 77225181 77225483 -63091282 - AluJo SINE Alu -19 293 1 573 171 75 53 chr10 77225483 77225580 -63091185 - L1MA4 LINE L1 -87 6213 6109 333 296 0 46 chr10 77225629 77225737 -63091028 - MIR SINE MIR -64 144 42 21 0 0 0 chr10 77225977 77225998 -63090767 + AT_rich Low_complexity Low_complexity 1 21 0 419 229 92 9 chr10 77226354 77226463 -63090302 + MIR3 SINE MIR 54 171 -37 279 204 0 0 chr10 77227048 77227102 -63089663 - FLAM_A SINE Alu 0 133 80 243 185 19 37 chr10 77227109 77227163 -63089602 - AluSp SINE Alu -138 165 113 1751 147 43 7 chr10 77227204 77227503 -63089262 + AluJo SINE Alu 1 310 -2 25 0 0 0 chr10 77227575 77227600 -63089165 + AT_rich Low_complexity Low_complexity 1 25 0 185 0 40 0 chr10 77228784 77228809 -63087956 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 203 196 11 43 chr10 77228960 77229052 -63087713 + CT-rich Low_complexity Low_complexity 3 91 0 2003 157 34 11 chr10 77229150 77229507 -63087258 + MLT1A1 LTR MaLR 1 365 0 24 96 0 0 chr10 77233368 77233441 -63083324 + GC_rich Low_complexity Low_complexity 1 73 0 917 223 62 4 chr10 77233756 77233998 -63082767 - ORSL DNA AcHobo -19 256 1 309 216 0 0 chr10 77234576 77234627 -63082138 - L2 LINE L2 -13 3300 3250 255 31 0 0 chr10 77235269 77235301 -63081464 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 198 226 376 21 chr10 77236053 77236146 -63080619 + MIR SINE MIR 135 260 -2 * 262 335 97 11 chr10 77236090 77236266 -63080499 - MIR SINE MIR -19 243 53 938 166 0 0 chr10 77236338 77236483 -63080282 - FRAM SINE Alu -32 144 1 708 207 7 22 chr10 77237670 77237805 -63078960 + FLAM_A SINE Alu 1 133 0 202 323 105 32 chr10 77237900 77238024 -63078741 + MIR3 SINE MIR 65 197 -11 2178 88 3 7 chr10 77238203 77238500 -63078265 - AluY SINE Alu -15 296 1 2157 119 6 3 chr10 77242485 77242797 -63073968 + AluSq SINE Alu 1 313 0 1290 166 33 0 chr10 77243850 77244091 -63072674 - L1MA9 LINE L1 0 6312 6064 285 154 15 15 chr10 77244091 77244156 -63072609 - L1 LINE L1 -1130 5016 4952 7306 149 74 20 chr10 77244157 77245626 -63071139 - L1 LINE L1 -1163 4983 3436 304 225 78 78 chr10 77246432 77246574 -63070191 - L1ME4a LINE L1 -12 6109 5968 1624 141 13 66 chr10 77246666 77246971 -63069794 - AluJb SINE Alu -23 289 1 263 241 38 90 chr10 77247003 77247136 -63069629 - L1ME4a LINE L1 -359 5762 5637 201 337 0 56 chr10 77247925 77248014 -63068751 + MIR SINE MIR 20 103 -159 415 258 113 27 chr10 77248246 77248452 -63068313 + MLT1I LTR MaLR 155 409 0 1520 107 5 0 chr10 77249057 77249272 -63067493 + AluSq SINE Alu 83 298 -15 1650 130 76 4 chr10 77249362 77249639 -63067126 + AluJo SINE Alu 5 301 -11 362 234 43 0 chr10 77250292 77250386 -63066379 + MER20B DNA MER1_type 56 153 -630 2332 98 0 0 chr10 77250601 77250907 -63065858 + AluSx SINE Alu 1 306 -6 719 269 41 18 chr10 77250922 77251141 -63065624 - MIR SINE MIR -6 256 33 21 0 0 0 chr10 77254307 77254328 -63062437 + AT_rich Low_complexity Low_complexity 1 21 0 1149 136 23 0 chr10 77304533 77304709 -63012056 - MER3 DNA MER1_type -27 182 3 271 178 27 27 chr10 77306632 77306705 -63010060 - L1MEc LINE L1 -4106 2290 2218 1039 151 0 12 chr10 77306709 77306881 -63009884 - AluSg/x SINE Alu -14 296 127 1182 142 75 9 chr10 77308218 77308430 -63008335 + AluSg/x SINE Alu 85 310 0 292 261 0 0 chr10 77308435 77308504 -63008261 + MLT1J LTR MaLR 443 511 0 917 114 0 0 chr10 77308884 77309007 -63007758 + FLAM_C SINE Alu 1 123 -10 180 179 26 0 chr10 77309484 77309523 -63007242 - L2 LINE L2 -5 3308 3269 308 154 0 31 chr10 77312052 77312117 -63004648 - MLT1B LTR MaLR -164 226 164 1435 194 41 0 chr10 77312121 77312389 -63004376 - AluJo SINE Alu -1 311 33 992 117 76 41 chr10 77312389 77312560 -63004205 - MLT1B LTR MaLR -213 177 1 407 301 69 12 chr10 77313542 77313715 -63003050 - MIR SINE MIR -32 230 48 1208 218 39 25 chr10 77314206 77314491 -63002274 + AluJo SINE Alu 1 289 -23 193 314 92 39 chr10 77315066 77315219 -63001546 - MIR3 SINE MIR -45 163 3 8041 52 6 0 chr10 77315707 77317288 -62999477 - L1PA6 LINE L1 -227 5927 4341 579 267 23 68 chr10 77317409 77317630 -62999135 + L1ME2 LINE L1 5921 6131 -33 247 255 67 53 chr10 77317668 77317876 -62998889 + L1MC4 LINE L1 7832 8042 0 247 305 9 19 chr10 77318184 77318289 -62998476 + (TA)n Simple_repeat Simple_repeat 2 105 0 305 239 205 49 chr10 77318681 77318886 -62997879 - MIR SINE MIR -6 256 20 207 186 0 0 chr10 77319842 77319885 -62996880 + GA-rich Low_complexity Low_complexity 2 44 0 850 231 109 20 chr10 77319913 77320160 -62996605 + MLT1J LTR MaLR 4 272 -239 1499 161 0 28 chr10 77321852 77322100 -62994665 + AluJb SINE Alu 59 299 -13 240 275 218 14 chr10 77322101 77322243 -62994522 + MIR3 SINE MIR 18 188 -20 201 39 0 0 chr10 77324017 77324043 -62992722 + (TCTCTG)n Simple_repeat Simple_repeat 2 27 0 2407 174 76 13 chr10 77324220 77324691 -62992074 - MLT1D LTR MaLR 0 505 5 265 186 31 21 chr10 77324977 77325074 -62991691 + CT-rich Low_complexity Low_complexity 2 99 0 1808 181 56 23 chr10 77325215 77325608 -62991157 + MSTB1 LTR MaLR 1 406 -26 238 180 66 49 chr10 77325984 77326045 -62990720 - MIR SINE MIR -123 139 78 441 123 12 43 chr10 77326564 77326578 -62990187 + (TA)n Simple_repeat Simple_repeat 2 15 -143 2308 122 43 66 chr10 77326578 77326771 -62989994 + Tigger2a DNA MER2_type 1 197 -2511 2078 94 6 69 chr10 77326771 77327090 -62989675 + AluSq SINE Alu 1 299 -14 2308 122 43 66 chr10 77327090 77327337 -62989428 + Tigger2a DNA MER2_type 197 431 -3 441 123 12 43 chr10 77327337 77327484 -62989281 + (TA)n Simple_repeat Simple_repeat 15 158 0 252 0 0 0 chr10 77327484 77327512 -62989253 + (GA)n Simple_repeat Simple_repeat 2 29 0 213 236 73 0 chr10 77327911 77327966 -62988799 - MIR SINE MIR -63 145 87 271 223 43 0 chr10 77331107 77331201 -62985564 + (TA)n Simple_repeat Simple_repeat 1 98 0 28 86 0 0 chr10 77331270 77331340 -62985425 + AT_rich Low_complexity Low_complexity 1 70 0 187 143 18 36 chr10 77331648 77331704 -62985061 + (TATG)n Simple_repeat Simple_repeat 4 58 0 459 335 34 11 chr10 77331753 77331932 -62984833 - MIR SINE MIR -72 190 8 1639 116 37 11 chr10 77332162 77332430 -62984335 - L1MA5A LINE L1 0 6297 6023 30513 34 3 1 chr10 77332538 77336648 -62980117 - L1P1 LINE L1 -337 5818 1703 809 189 9 57 chr10 77336776 77337004 -62979761 - AluSg SINE Alu -91 219 3 590 153 162 0 chr10 77337060 77337171 -62979594 + FLAM_C SINE Alu 2 130 -3 194 206 103 59 chr10 77337372 77337440 -62979325 - MIR SINE MIR -102 106 36 400 274 92 64 chr10 77337728 77338085 -62978680 - L2 LINE L2 -19 3294 2928 391 179 250 14 chr10 77339256 77339396 -62977369 - MIR SINE MIR -8 254 82 492 301 153 14 chr10 77340513 77340722 -62976043 + MIR SINE MIR 18 255 -7 428 293 55 22 chr10 77340794 77340975 -62975790 + MER5A DNA MER1_type 1 187 -2 1514 163 145 21 chr10 77341218 77341543 -62975222 - MLT1A1 LTR MaLR 0 365 1 31471 71 8 3 chr10 77342222 77346314 -62970451 - L1P LINE L1 -2035 4111 1 231 264 48 80 chr10 77346369 77346494 -62970271 - MER5A DNA MER1_type -44 145 25 1704 190 0 0 chr10 77347431 77347710 -62969055 + AluJo SINE Alu 1 279 -33 649 204 154 6 chr10 77347971 77348133 -62968632 + MER5A DNA MER1_type 4 189 0 280 298 62 31 chr10 77349317 77349478 -62967287 + L3 LINE CR1 651 816 -761 291 323 0 11 chr10 77349647 77349740 -62967025 + L3 LINE CR1 1056 1147 -430 209 232 36 0 chr10 77349875 77349931 -62966834 + L2 LINE L2 3253 3310 -3 294 238 50 12 chr10 77350174 77350254 -62966511 + MIR SINE MIR 19 101 -107 287 276 112 31 chr10 77351738 77351836 -62964929 + MIR SINE MIR 38 143 -65 260 276 58 0 chr10 77351935 77352022 -62964743 - L2 LINE L2 0 3272 3181 555 301 104 16 chr10 77352473 77352782 -62963983 + MLT1L LTR MaLR 130 465 -150 2350 86 0 0 chr10 77352900 77353199 -62963566 - AluSc SINE Alu 0 301 3 338 244 0 35 chr10 77353352 77353438 -62963327 + L2 LINE L2 3225 3307 -6 644 273 77 47 chr10 77353756 77353816 -62962949 - L1MEd LINE L1 -4783 1527 1470 1220 160 134 110 chr10 77353816 77354197 -62962568 + MLT1B LTR MaLR 1 390 0 644 273 77 47 chr10 77354197 77354766 -62961999 - L1MEd LINE L1 -4840 1470 850 325 306 162 47 chr10 77354819 77355479 -62961286 - L1MEd LINE L1 -5371 748 13 442 334 98 17 chr10 77355516 77355926 -62960839 + L2 LINE L2 1899 2341 -973 2266 123 73 25 chr10 77355932 77356340 -62960425 - MSTA LTR MaLR 0 428 1 2241 120 3 6 chr10 77356340 77356666 -62960099 - MSTA-int LTR MaLR 0 1651 1327 * 10397 115 10 16 chr10 77356665 77358176 -62958589 + L1P3 LINE L1 10 1511 -4950 608 236 51 19 chr10 77359742 77359899 -62956866 + MIR SINE MIR 12 173 -89 688 217 25 6 chr10 77361003 77361160 -62955605 + MIR SINE MIR 35 194 -68 335 280 8 8 chr10 77362047 77362165 -62954600 - MER103 DNA DNA -46 120 3 424 302 82 6 chr10 77362723 77362905 -62953860 - MIR SINE MIR -65 197 2 2527 128 65 13 chr10 77363563 77364010 -62952755 - L1MB3 LINE L1 -39 6144 5675 418 195 0 24 chr10 77364028 77364046 -62952719 - L1ME LINE L1 -389 5777 5760 2327 196 79 20 chr10 77364046 77365030 -62951735 - L1MB3 LINE L1 -327 5856 4807 341 320 0 0 chr10 77367575 77367672 -62949093 + MIR3 SINE MIR 91 187 -21 2512 281 128 31 chr10 77368585 77369856 -62946909 + HAL1 LINE L1 348 1742 -765 671 285 242 10 chr10 77369918 77370438 -62946327 + HAL1 LINE L1 1848 2488 -19 35 63 0 0 chr10 77370451 77370514 -62946251 + AT_rich Low_complexity Low_complexity 1 63 0 268 355 101 4 chr10 77371456 77371732 -62945033 - L2 LINE L2 -25 3247 2945 1396 196 107 0 chr10 77372158 77372439 -62944326 + AluJo SINE Alu 2 312 0 569 258 13 26 chr10 77373090 77373241 -62943524 + MER5A DNA MER1_type 41 189 0 204 318 16 0 chr10 77373295 77373358 -62943407 - L2 LINE L2 -93 3179 3116 341 204 261 34 chr10 77374281 77374457 -62942308 - MLT1K LTR MaLR -10 578 363 626 320 18 4 chr10 77374860 77375085 -62941680 + MIR SINE MIR 34 261 -1 288 331 96 0 chr10 77375790 77375926 -62940839 - MIR SINE MIR -48 214 66 2011 130 79 23 chr10 77376030 77376384 -62940381 - THE1C LTR MaLR 0 375 2 916 152 0 0 chr10 77377305 77377437 -62939328 - FLAM_C SINE Alu -1 132 1 385 290 204 18 chr10 77377516 77377737 -62939028 - MLT1J2 LTR MaLR -143 307 46 463 119 12 12 chr10 77378221 77378305 -62938460 - L1PA15 LINE L1 0 6165 6082 21 0 0 0 chr10 77378662 77378683 -62938082 + AT_rich Low_complexity Low_complexity 1 21 0 396 230 15 82 chr10 77379473 77379493 -62937272 - L2 LINE L2 -2 3270 3250 1661 134 91 18 chr10 77379493 77379768 -62936997 - AluJb SINE Alu -13 299 5 396 230 15 82 chr10 77379768 77379882 -62936883 - L2 LINE L2 -22 3250 3145 454 289 158 22 chr10 77380134 77380456 -62936309 - L2 LINE L2 -337 2977 2612 410 250 161 18 chr10 77380597 77380905 -62935860 - MLT1J LTR MaLR 0 511 125 204 158 26 0 chr10 77382936 77382974 -62933791 + T-rich Low_complexity Low_complexity 2 40 0 205 138 0 0 chr10 77383178 77383207 -62933558 + (TG)n Simple_repeat Simple_repeat 2 30 0 297 183 256 0 chr10 77383480 77383562 -62933203 - MIR SINE MIR -62 146 44 300 256 26 0 chr10 77383639 77383717 -62933048 + MIR3 SINE MIR 88 167 -41 226 216 0 20 chr10 77383927 77383978 -62932787 + L2 LINE L2 3210 3259 -13 8226 156 11 29 chr10 77384949 77386390 -62930375 - L1P LINE L1 -4716 1430 15 504 247 75 20 chr10 77386681 77386827 -62929938 - MIR SINE MIR -37 225 72 323 282 36 9 chr10 77387088 77387198 -62929567 - MIR3 SINE MIR -48 160 48 370 299 27 28 chr10 77387510 77387715 -62929050 + MIR SINE MIR 14 212 -50 603 234 40 0 chr10 77388146 77388270 -62928495 + MER94 DNA DNA 6 134 0 229 324 107 36 chr10 77388450 77388674 -62928091 + MIR SINE MIR 19 262 0 420 250 53 13 chr10 77388849 77389001 -62927764 + MIR SINE MIR 28 185 -77 368 269 0 19 chr10 77389520 77389624 -62927141 - MLT1K LTR MaLR 0 588 487 538 240 25 61 chr10 77390792 77390935 -62925830 + MIR SINE MIR 52 188 -74 2134 130 13 0 chr10 77390935 77391236 -62925529 + AluSx SINE Alu 2 306 -6 538 240 25 61 chr10 77391236 77391288 -62925477 + MIR SINE MIR 188 240 -22 608 260 102 17 chr10 77392583 77392818 -62923947 + MLT1G LTR MaLR 1 255 -340 24 32 0 0 chr10 77393106 77393137 -62923628 + AT_rich Low_complexity Low_complexity 1 31 0 750 257 71 5 chr10 77393174 77393384 -62923381 + MLT1G LTR MaLR 367 590 0 472 226 10 10 chr10 77394318 77394420 -62922345 - FLAM_A SINE Alu -5 137 36 545 152 29 8 chr10 77394494 77394710 -62922055 + AluJ SINE Alu 13 288 -24 23 0 0 0 chr10 77394799 77394822 -62921943 + AT_rich Low_complexity Low_complexity 1 23 0 224 250 0 0 chr10 77395033 77395081 -62921684 + MIR SINE MIR 92 139 -69 229 200 160 40 chr10 77395085 77395160 -62921605 - MIR SINE MIR -90 118 35 189 0 0 0 chr10 77395418 77395439 -62921326 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 223 340 0 10 chr10 77397190 77397287 -62919478 + CT-rich Low_complexity Low_complexity 1 96 0 223 236 217 9 chr10 77397598 77397704 -62919061 + MIR SINE MIR 119 246 -16 28 29 0 0 chr10 77398071 77398106 -62918659 + AT_rich Low_complexity Low_complexity 1 35 0 297 229 25 179 chr10 77398182 77398461 -62918304 - MIR SINE MIR -3 259 24 2648 82 8 10 chr10 77399017 77403615 -62913150 + L1PA7 LINE L1 1439 6150 -4 7110 187 40 3 chr10 77403616 77404907 -62911858 - MSTA-int LTR MaLR -313 1338 1 2160 177 57 5 chr10 77404907 77405314 -62911451 - MSTA LTR MaLR 0 428 1 362 324 60 69 chr10 77405842 77406206 -62910559 + L2 LINE L2 2912 3272 0 2303 249 37 37 chr10 77406650 77407322 -62909443 - L1ME3A LINE L1 -8 6162 5491 5348 150 23 19 chr10 77407341 77408018 -62908747 - L1MB1 LINE L1 -1 6167 5478 1786 156 61 10 chr10 77408018 77408313 -62908452 - AluJb SINE Alu -2 310 1 5348 150 23 19 chr10 77408313 77408852 -62907913 - L1MB1 LINE L1 -690 5478 4943 226 25 25 50 chr10 77408999 77409039 -62907726 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 230 283 26 62 chr10 77409311 77409424 -62907341 + L3 LINE CR1 675 783 -794 2200 262 75 16 chr10 77410313 77411135 -62905630 - L1MC4a LINE L1 -1643 6165 5295 1637 162 14 37 chr10 77411146 77411442 -62905323 + AluJb SINE Alu 1 289 -23 296 111 0 0 chr10 77411696 77411741 -62905024 - Alu SINE Alu -3 299 255 243 0 0 0 chr10 77413325 77413352 -62903413 + (A)n Simple_repeat Simple_repeat 1 27 0 441 178 54 39 chr10 77417953 77418082 -62898683 + L1ME4a LINE L1 5959 6089 -32 280 287 65 0 chr10 77418104 77418212 -62898553 - L2 LINE L2 -21 3251 3137 1868 137 13 33 chr10 77419977 77420277 -62896488 + AluJo SINE Alu 1 294 -18 855 234 72 9 chr10 77420728 77420950 -62895815 + MIR SINE MIR 26 261 -1 21 0 0 0 chr10 77422967 77422988 -62893777 + AT_rich Low_complexity Low_complexity 1 21 0 257 229 21 73 chr10 77424658 77424754 -62892011 - L2 LINE L2 0 3313 3223 3444 64 32 2 chr10 77424815 77424893 -62891872 + L1PB1 LINE L1 5703 5777 -374 348 43 0 0 chr10 77424893 77424939 -62891826 + (TG)n Simple_repeat Simple_repeat 2 47 0 3444 64 32 2 chr10 77424939 77425295 -62891470 + L1PB1 LINE L1 5777 6150 -1 467 184 10 10 chr10 77425802 77425905 -62890860 + MER113 DNA MER1_type? 11 113 -408 2036 162 22 25 chr10 77425910 77426025 -62890740 + THE1B LTR MaLR 1 115 -249 438 108 0 0 chr10 77426025 77426090 -62890675 + (CTG)n Simple_repeat Simple_repeat 2 66 0 2036 162 22 25 chr10 77426090 77426339 -62890426 + THE1B LTR MaLR 115 364 0 243 207 103 0 chr10 77426431 77426489 -62890276 + MER113 DNA MER1_type? 458 521 0 363 288 76 8 chr10 77426497 77426615 -62890150 - MIR SINE MIR -55 153 28 1617 143 0 4 chr10 77426801 77427038 -62889727 + MER46A DNA MER2_type 1 236 0 29 0 0 0 chr10 77429853 77429882 -62886883 + AT_rich Low_complexity Low_complexity 1 29 0 218 114 0 23 chr10 77429883 77429927 -62886838 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 723 301 16 16 chr10 77430668 77430854 -62885911 + MER91A DNA MER1_type 1 186 -10 1505 163 3 49 chr10 77430865 77431189 -62885576 + L1MB3 LINE L1 5867 6153 -30 204 221 189 55 chr10 77431844 77431971 -62884794 + MIR3 SINE MIR 39 182 -26 199 146 36 0 chr10 77432024 77432079 -62884686 + (TG)n Simple_repeat Simple_repeat 1 57 0 214 213 46 28 chr10 77432104 77432212 -62884553 + (GTGTG)n Simple_repeat Simple_repeat 1 110 0 * 253 138 58 23 chr10 77432134 77432221 -62884544 + (TG)n Simple_repeat Simple_repeat 2 91 0 672 181 16 8 chr10 77432300 77432427 -62884338 + L1MB4 LINE L1 6047 6174 -6 3102 121 27 59 chr10 77433903 77434492 -62882273 - L1MA9 LINE L1 -24 6288 5719 759 92 0 0 chr10 77434491 77434589 -62882176 + L1MA9 LINE L1 5637 5734 -578 * 454 249 26 60 chr10 77434643 77434806 -62881959 + MER5B DNA MER1_type 40 177 -1 2106 144 0 0 chr10 77436377 77436676 -62880089 + AluJb SINE Alu 1 299 -13 219 259 143 0 chr10 77436784 77436878 -62879887 + MIR SINE MIR 42 153 -66 1902 203 44 29 chr10 77437499 77437953 -62878812 - MER65C LTR ERV1 0 461 1 252 299 94 34 chr10 77438459 77438576 -62878189 - MIR3 SINE MIR -81 127 4 215 268 18 0 chr10 77439047 77439103 -62877662 + CT-rich Low_complexity Low_complexity 1 57 0 536 167 0 10 chr10 77439103 77439199 -62877566 - L1MA9 LINE L1 -5 6307 6213 2117 125 31 0 chr10 77439199 77439519 -62877246 + L1MA9 LINE L1 5823 6152 -160 212 304 0 14 chr10 77439519 77439588 -62877177 + CT-rich Low_complexity Low_complexity 3 70 0 186 103 0 0 chr10 77439779 77439808 -62876957 + (TC)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr10 77440358 77440380 -62876385 + AT_rich Low_complexity Low_complexity 1 22 0 197 296 114 34 chr10 77440991 77441079 -62875686 + L3 LINE CR1 1438 1532 -45 585 165 8 0 chr10 77441140 77441243 -62875522 - MER5A DNA MER1_type -82 107 4 186 43 0 0 chr10 77441589 77441612 -62875153 + (TAA)n Simple_repeat Simple_repeat 2 24 0 442 196 0 22 chr10 77443102 77443194 -62873571 - MER5B DNA MER1_type -84 94 5 294 279 77 10 chr10 77443611 77443715 -62873050 + MER103 DNA DNA 35 145 -21 297 304 58 106 chr10 77444080 77444458 -62872307 - L2 LINE L2 -4 3268 2909 363 297 27 9 chr10 77444677 77444788 -62871977 - MIR SINE MIR -111 151 39 254 268 228 0 chr10 77444934 77445061 -62871704 - MIR3 SINE MIR -6 202 47 362 0 0 0 chr10 77445216 77445257 -62871508 + L1PA6 LINE L1 6109 6149 -5 651 260 91 40 chr10 77445285 77445403 -62871362 + MER46C DNA MER2_type 28 139 -199 1521 174 63 63 chr10 77445403 77445829 -62870936 + LTR37A LTR ERV1 1 426 0 651 260 91 40 chr10 77445829 77446006 -62870759 + MER46C DNA MER2_type 139 338 0 375 196 27 62 chr10 77446124 77446236 -62870529 + MER46C DNA MER2_type 231 338 0 216 0 0 0 chr10 77447017 77447041 -62869724 + (TTAAA)n Simple_repeat Simple_repeat 1 24 0 1560 168 32 14 chr10 77447041 77447321 -62869444 - AluJb SINE Alu -25 287 3 279 205 72 60 chr10 77447454 77447537 -62869228 - MIR3 SINE MIR 0 208 125 355 277 21 0 chr10 77447760 77447854 -62868911 - MER69 DNA AcHobo -2430 96 1 301 269 92 0 chr10 77448032 77448151 -62868614 + MER117 DNA MER1_type 36 165 -32 308 239 56 106 chr10 77448239 77448381 -62868384 + L2 LINE L2 3179 3313 0 2998 51 0 8 chr10 77451168 77451523 -62865242 + L1PA7 LINE L1 5802 6153 -1 239 264 0 0 chr10 77452190 77452262 -62864503 + G-rich Low_complexity Low_complexity 1 72 0 1559 160 52 10 chr10 77452279 77452567 -62864198 - AluSx SINE Alu -12 300 1 272 307 0 40 chr10 77453040 77453115 -62863650 - MIR3 SINE MIR -11 197 126 207 273 0 18 chr10 77453616 77453671 -62863094 + L2 LINE L2 3214 3267 -5 384 263 52 80 chr10 77454944 77455157 -62861608 + MIR SINE MIR 46 252 -10 755 277 22 22 chr10 77455486 77455717 -62861048 + MIR SINE MIR 2 232 -30 2447 65 3 13 chr10 77455773 77456082 -62860683 + AluY SINE Alu 1 306 -5 207 229 57 71 chr10 77457349 77457419 -62859346 - L2 LINE L2 -12 3301 3233 288 324 54 9 chr10 77459363 77459474 -62857291 + MIR3 SINE MIR 50 165 -43 354 302 16 0 chr10 77461836 77461962 -62854803 + (CATATA)n Simple_repeat Simple_repeat 6 133 0 433 363 39 4 chr10 77462717 77462973 -62853792 - L3 LINE CR1 -1 1576 1312 688 261 47 24 chr10 77463019 77463230 -62853535 - MIR SINE MIR 0 262 47 195 304 89 25 chr10 77463251 77463409 -62853356 + MIR SINE MIR 80 247 -15 238 329 46 75 chr10 77463727 77464034 -62852731 - MLT1K LTR MaLR -103 485 188 912 118 0 16 chr10 77464502 77464629 -62852136 + FLAM_C SINE Alu 1 125 -8 222 239 0 0 chr10 77466035 77466081 -62850684 + L2 LINE L2 3227 3272 0 186 103 0 0 chr10 77466337 77466366 -62850399 + (AGGGGG)n Simple_repeat Simple_repeat 5 33 0 496 214 145 0 chr10 77466488 77466619 -62850146 + MIR SINE MIR 113 262 0 755 249 92 53 chr10 77466885 77467184 -62849581 - MER113 DNA MER1_type? -83 438 117 2338 90 7 0 chr10 77467184 77467485 -62849280 - AluY SINE Alu -8 303 1 755 249 92 53 chr10 77467485 77467599 -62849166 - MER113 DNA MER1_type? -404 117 9 186 304 109 33 chr10 77467617 77467709 -62849056 - MIR SINE MIR -82 126 28 843 281 126 46 chr10 77468159 77468964 -62847801 - L2 LINE L2 0 3313 2451 182 229 42 0 chr10 77469136 77469184 -62847581 - L3b LINE CR1 -203 1380 1331 219 146 0 0 chr10 77470010 77470051 -62846714 + (T)n Simple_repeat Simple_repeat 1 41 0 297 222 0 0 chr10 77470302 77470356 -62846409 + L2 LINE L2 3219 3272 0 588 294 106 49 chr10 77470412 77470970 -62845795 - L2 LINE L2 -71 3242 2643 1277 266 96 31 chr10 77471087 77471565 -62845200 + MLT1J LTR MaLR 1 509 -2 431 290 124 32 chr10 77471619 77471836 -62844929 - MIR SINE MIR -15 247 11 278 111 148 0 chr10 77472117 77472171 -62844594 - MLT1J2 LTR MaLR -37 409 348 707 278 73 12 chr10 77472206 77472465 -62844300 - MLT1J2 LTR MaLR -175 275 1 592 299 77 26 chr10 77472469 77472703 -62844062 + MIR SINE MIR 14 259 -3 2266 132 0 0 chr10 77472765 77473075 -62843690 - AluSx SINE Alu -2 310 1 3760 135 7 3 chr10 77476105 77476696 -62840069 + L1MB4 LINE L1 5588 6180 0 2032 129 9 38 chr10 77476770 77477088 -62839677 - AluJb SINE Alu -3 309 1 1392 134 65 0 chr10 77477230 77477446 -62839319 - MER30 DNA MER1_type 0 230 1 1042 221 22 4 chr10 77477533 77477764 -62839001 + MIR SINE MIR 28 262 0 253 377 19 13 chr10 77478772 77478926 -62837839 + MIR3 SINE MIR 37 191 -17 360 0 0 0 chr10 77479904 77479944 -62836821 + (TG)n Simple_repeat Simple_repeat 2 41 0 280 339 8 8 chr10 77481257 77481381 -62835384 + L2 LINE L2 3189 3312 -1 191 62 62 0 chr10 77481531 77481563 -62835202 + CT-rich Low_complexity Low_complexity 2 35 0 6408 66 4 0 chr10 77481609 77482417 -62834348 - L1PA8 LINE L1 -7 6165 5355 1254 209 127 43 chr10 77482688 77483151 -62833614 + MLT1D LTR MaLR 3 504 -1 219 296 83 59 chr10 77483309 77483478 -62833287 - MIR SINE MIR -55 207 35 26 0 0 0 chr10 77484564 77484590 -62832175 + AT_rich Low_complexity Low_complexity 1 26 0 1434 139 0 0 chr10 77484765 77484967 -62831798 + AluSg/x SINE Alu 90 291 -21 1660 166 3 40 chr10 77484975 77485277 -62831488 + AluJo SINE Alu 1 291 -21 680 162 29 22 chr10 77485294 77485430 -62831335 + L1MB3 LINE L1 6045 6181 -2 192 125 0 0 chr10 77486220 77486252 -62830513 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 387 272 97 20 chr10 77486328 77486642 -62830123 - L2 LINE L2 -193 3079 2753 1095 186 55 5 chr10 77488047 77488246 -62828519 - MER20 DNA MER1_type -10 209 1 201 290 89 57 chr10 77488904 77489028 -62827737 + L2 LINE L2 3145 3272 0 22 35 0 0 chr10 77489405 77489434 -62827331 + AT_rich Low_complexity Low_complexity 1 29 0 1057 171 12 0 chr10 77490231 77490395 -62826370 - FAM SINE Alu -9 166 1 207 262 0 0 chr10 77491420 77491462 -62825303 - MIR3 SINE MIR -52 156 115 229 228 18 0 chr10 77492618 77492675 -62824090 + tRNA-Glu-GAA tRNA tRNA 8 65 -10 357 291 165 0 chr10 77492677 77492835 -62823930 + MIR SINE MIR 68 251 -11 2113 146 0 0 chr10 77493051 77493353 -62823412 - AluSx SINE Alu -10 302 1 306 328 11 40 chr10 77493973 77494150 -62822615 - MIR SINE MIR -71 191 20 520 239 30 75 chr10 77494560 77494761 -62822004 - MLT1J2 LTR MaLR -6 444 253 1204 235 61 42 chr10 77494783 77495191 -62821574 + MLT1C LTR MaLR 6 421 -46 433 177 191 34 chr10 77495216 77495363 -62821402 - MLT1J1 LTR MaLR -256 190 21 354 317 55 10 chr10 77496736 77496909 -62819856 - MIR SINE MIR -52 156 11 9884 58 9 92 chr10 77498172 77499683 -62817082 + SVA Other Other 1 1385 -1 394 231 8 8 chr10 77499778 77499902 -62816863 + (TA)n Simple_repeat Simple_repeat 2 128 -7 2496 139 32 28 chr10 77499902 77500334 -62816431 - Tigger2a DNA MER2_type 0 434 1 394 231 8 8 chr10 77500334 77500343 -62816422 + (TA)n Simple_repeat Simple_repeat 127 135 0 249 243 14 29 chr10 77500348 77500418 -62816347 + (TATG)n Simple_repeat Simple_repeat 2 70 0 522 216 86 0 chr10 77500533 77500649 -62816116 + MER112 DNA MER1_type 134 259 -1 2223 119 0 0 chr10 77500915 77501209 -62815556 + AluSq SINE Alu 1 294 -19 26 30 0 0 chr10 77501417 77501450 -62815315 + AT_rich Low_complexity Low_complexity 1 33 0 225 330 117 0 chr10 77501526 77501629 -62815136 + MIR3 SINE MIR 91 205 -3 2465 181 49 47 chr10 77503220 77503816 -62812949 + L1MD3 LINE L1 7397 7993 -2 499 180 10 0 chr10 77503830 77503930 -62812835 + L1MA9 LINE L1 5999 6099 -213 231 36 0 0 chr10 77504028 77504056 -62812709 + (GA)n Simple_repeat Simple_repeat 1 28 0 304 231 26 0 chr10 77504105 77504183 -62812582 + MER116 DNA Mariner 1 80 0 415 339 11 23 chr10 77504591 77504765 -62812000 + MIR3 SINE MIR 16 187 -21 281 311 44 24 chr10 77506150 77506356 -62810409 + L2 LINE L2 2826 3035 -237 421 270 22 56 chr10 77506413 77506591 -62810174 - MER5B DNA MER1_type -1 177 6 1393 218 63 14 chr10 77507174 77507522 -62809243 - MLT1A1 LTR MaLR 0 365 1 1248 214 131 90 chr10 77507690 77508278 -62808487 + MLT1E2 LTR MaLR 1 612 -14 483 176 0 0 chr10 77512179 77512270 -62804495 + (TG)n Simple_repeat Simple_repeat 2 92 0 507 290 51 76 chr10 77514149 77514463 -62802302 - L2 LINE L2 0 3313 3008 263 320 0 0 chr10 77514631 77514706 -62802059 + L2 LINE L2 3238 3312 -1 1277 258 68 40 chr10 77516563 77516963 -62799802 + MER115 DNA AcHobo 280 690 -3 460 233 58 0 chr10 77517771 77517874 -62798891 - L2 LINE L2 -6 3307 3199 29 47 0 0 chr10 77518455 77518498 -62798267 + AT_rich Low_complexity Low_complexity 1 43 0 314 302 32 79 chr10 77518582 77518834 -62797931 + L3 LINE CR1 263 502 -1075 1195 133 67 127 chr10 77519195 77519495 -62797270 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr10 77519499 77519528 -62797237 + (CAA)n Simple_repeat Simple_repeat 2 30 0 204 329 154 41 chr10 77520140 77520432 -62796333 - L2 LINE L2 -96 3176 2852 411 21 0 0 chr10 77520835 77520883 -62795882 + (CA)n Simple_repeat Simple_repeat 1 48 0 553 294 88 4 chr10 77521093 77521321 -62795444 + MIR SINE MIR 2 248 -14 234 317 73 8 chr10 77528527 77528650 -62788115 + MER117 DNA MER1_type 1 131 -66 359 360 99 0 chr10 77528867 77529039 -62787726 - MIR3 SINE MIR -17 191 3 397 324 116 23 chr10 77529841 77530100 -62786665 - L3b LINE CR1 -199 1384 1102 335 259 81 61 chr10 77530754 77530951 -62785814 + MLT1H LTR MaLR 29 229 -320 274 230 54 14 chr10 77531082 77531156 -62785609 + MLT1G LTR MaLR 498 574 -16 635 236 54 0 chr10 77532866 77533014 -62783751 - MLT1L LTR MaLR -8 607 452 265 270 0 16 chr10 77533068 77533131 -62783634 + MIR3 SINE MIR 99 160 -48 226 180 33 0 chr10 77533484 77533545 -62783220 + GA-rich Low_complexity Low_complexity 2 64 0 610 274 115 13 chr10 77533604 77533994 -62782771 + L1ME4a LINE L1 5690 6119 -2 2157 250 122 32 chr10 77534511 77536027 -62780738 - L1ME LINE L1 -4447 1814 127 213 264 139 62 chr10 77536189 77536318 -62780447 - L3 LINE CR1 -5 1572 1434 356 261 55 32 chr10 77536399 77536529 -62780236 - MIR SINE MIR -62 146 46 277 289 39 29 chr10 77536543 77536647 -62780118 - L3 LINE CR1 -140 1437 1333 206 232 145 72 chr10 77536667 77536736 -62780029 + L2 LINE L2 3150 3223 -49 291 287 91 42 chr10 77536851 77536994 -62779771 - L3 LINE CR1 -334 1243 1094 1660 257 41 7 chr10 77537002 77537442 -62779323 + L1MCc LINE L1 17 471 -5952 2436 242 89 47 chr10 77537690 77539177 -62777588 + L1MCc LINE L1 833 2578 -4544 1972 186 34 17 chr10 77539287 77539696 -62777069 + L1ME1 LINE L1 5746 6161 -5 808 236 87 0 chr10 77539726 77539887 -62776878 + FAM SINE Alu 1 46 -3 444 182 45 34 chr10 77539906 77539994 -62776771 + MER2 DNA MER2_type 1 89 -150 1141 175 13 21 chr10 77540058 77540292 -62776473 + L1ME1 LINE L1 5688 5919 -247 274 273 30 0 chr10 77540297 77540363 -62776402 + MER2 DNA MER2_type 278 345 0 390 255 299 0 chr10 77541791 77541948 -62774817 + MIR SINE MIR 12 215 -47 640 249 67 54 chr10 77542223 77542520 -62774245 - L1ME4a LINE L1 -34 6087 5787 634 211 82 7 chr10 77543048 77543195 -62773570 + MIR3 SINE MIR 17 174 -34 319 286 0 0 chr10 77543291 77543375 -62773390 - MIR SINE MIR -92 170 87 656 164 29 21 chr10 77543590 77543730 -62773035 - MER20 DNA MER1_type -26 193 53 21 0 0 0 chr10 77547121 77547142 -62769623 + AT_rich Low_complexity Low_complexity 1 21 0 181 383 33 0 chr10 77547703 77547763 -62769002 - L2 LINE L2 -5 3308 3247 865 247 168 25 chr10 77548209 77548573 -62768192 + L2 LINE L2 2890 3305 -8 315 0 0 0 chr10 77549912 77549947 -62766818 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 410 211 10 0 chr10 77551421 77551525 -62765240 + GA-rich Low_complexity Low_complexity 4 108 0 223 177 32 0 chr10 77552425 77552487 -62764278 + GA-rich Low_complexity Low_complexity 1 64 0 194 91 30 0 chr10 77554318 77554351 -62762414 + (TA)n Simple_repeat Simple_repeat 1 34 0 198 0 0 0 chr10 77554352 77554374 -62762391 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 335 96 16 chr10 77554890 77555078 -62761687 - MIR SINE MIR -38 224 22 516 299 45 7 chr10 77555293 77555447 -62761318 + MARNA DNA Mariner 415 574 -12 666 180 0 0 chr10 77556833 77556972 -62759793 + (CA)n Simple_repeat Simple_repeat 2 140 0 22 0 0 0 chr10 77557103 77557125 -62759640 + AT_rich Low_complexity Low_complexity 1 22 0 339 252 103 68 chr10 77559449 77559626 -62757139 + MIR SINE MIR 18 202 -60 335 278 32 102 chr10 77559943 77560227 -62756538 + L1ME4a LINE L1 5622 5885 -236 389 230 103 32 chr10 77561426 77561552 -62755213 - MIR3 SINE MIR -37 171 37 232 286 0 18 chr10 77563970 77564026 -62752739 - L2 LINE L2 0 3272 3218 378 250 48 48 chr10 77564167 77564291 -62752474 - L2 LINE L2 -220 3052 2929 321 89 0 0 chr10 77565372 77565417 -62751348 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 237 137 221 11 chr10 77565517 77565612 -62751153 - Charlie7 DNA MER1_type -54 2558 2444 1013 71 0 0 chr10 77565614 77565740 -62751025 + AluY SINE Alu 175 300 -11 1878 240 78 45 chr10 77565741 77566000 -62750765 - Charlie7 DNA MER1_type -167 2445 2196 2038 173 88 51 chr10 77566000 77566487 -62750278 - MLT1D LTR MaLR 0 505 1 1878 240 78 45 chr10 77566487 77566957 -62749808 - Charlie7 DNA MER1_type -416 2196 1627 2231 127 0 0 chr10 77566957 77567256 -62749509 - AluSx SINE Alu -13 299 1 1878 240 78 45 chr10 77567256 77567462 -62749303 - Charlie7 DNA MER1_type -985 1627 1429 237 326 96 22 chr10 77567537 77567807 -62748958 - Charlie7 DNA MER1_type -2317 295 6 399 308 46 0 chr10 77567812 77567969 -62748796 - MIR3 SINE MIR -55 153 5 777 299 28 33 chr10 77568038 77568252 -62748513 + MIR SINE MIR 31 243 -19 267 31 0 0 chr10 77568308 77568340 -62748425 + (CA)n Simple_repeat Simple_repeat 2 33 0 390 318 28 34 chr10 77569382 77569561 -62747204 + MIR3 SINE MIR 7 184 -24 884 266 30 13 chr10 77569786 77570023 -62746742 + MLT1I LTR MaLR 167 407 -2 21 36 0 0 chr10 77570928 77570956 -62745809 + AT_rich Low_complexity Low_complexity 1 28 0 426 39 0 0 chr10 77573558 77573610 -62743155 + (CA)n Simple_repeat Simple_repeat 2 53 0 246 179 54 0 chr10 77573627 77573683 -62743082 - L1MCa LINE L1 -4362 2064 2006 * 287 200 44 67 chr10 77573648 77573738 -62743027 + L1MC4 LINE L1 6616 6703 -1339 235 211 58 39 chr10 77573709 77573813 -62742952 + L1MCa LINE L1 1996 2101 -4325 * 227 229 0 0 chr10 77573832 77573893 -62742872 + L1MC4 LINE L1 6920 6980 -1342 374 67 17 0 chr10 77573899 77573954 -62742811 + (TA)n Simple_repeat Simple_repeat 1 57 0 1479 197 13 30 chr10 77573954 77574253 -62742512 - AluJo SINE Alu -18 294 1 357 227 23 0 chr10 77574903 77574991 -62741774 - L1MC4 LINE L1 -1339 6703 6614 313 278 0 0 chr10 77574913 77575003 -62741762 + L1MC4 LINE L1 6614 6703 -1339 * 315 0 0 0 chr10 77575046 77575055 -62741710 + (TG)n Simple_repeat Simple_repeat 1 44 0 315 0 0 0 chr10 77575055 77575090 -62741675 + (TG)n Simple_repeat Simple_repeat 2 36 0 1421 164 40 79 chr10 77575105 77575409 -62741356 - AluJo SINE Alu -20 292 1 1654 163 7 37 chr10 77575471 77575771 -62740994 + AluJo SINE Alu 2 292 -20 357 223 213 11 chr10 77575773 77575867 -62740898 + MIR SINE MIR 34 146 -62 265 252 75 68 chr10 77575977 77576124 -62740641 - MER112 DNA MER1_type -96 164 17 16439 119 19 18 chr10 77576956 77579372 -62737393 - Tigger1 DNA MER2_type 0 2418 1 662 314 82 26 chr10 77579497 77579800 -62736965 - L2 LINE L2 0 3272 2953 905 262 23 9 chr10 77580001 77580222 -62736543 + MIR SINE MIR 39 262 0 183 178 22 44 chr10 77581115 77581160 -62735605 - MER5A DNA MER1_type -39 150 107 23 0 0 0 chr10 77581567 77581590 -62735175 + AT_rich Low_complexity Low_complexity 1 23 0 219 276 95 29 chr10 77582201 77582306 -62734459 + L2 LINE L2 3160 3271 -1 201 303 46 46 chr10 77583374 77583483 -62733282 + MIR SINE MIR 22 130 -132 278 203 76 0 chr10 77583528 77583607 -62733158 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 218 105 26 0 chr10 77584089 77584127 -62732638 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 183 245 20 20 chr10 77585206 77585255 -62731510 + L2 LINE L2 3261 3309 -4 376 309 49 39 chr10 77587231 77587435 -62729330 + MIR3 SINE MIR 2 207 -1 330 26 0 0 chr10 77587604 77587643 -62729122 + (TG)n Simple_repeat Simple_repeat 2 40 0 407 260 154 30 chr10 77587764 77587933 -62728832 + MIR SINE MIR 19 208 -54 333 260 40 10 chr10 77587997 77588097 -62728668 + MIR SINE MIR 160 262 0 198 0 0 0 chr10 77588726 77588748 -62728017 + (T)n Simple_repeat Simple_repeat 1 22 0 240 326 41 0 chr10 77592099 77592197 -62724568 + L1P LINE L1 2949 3050 -3096 1914 142 18 0 chr10 77592302 77592583 -62724182 + AluSx SINE Alu 1 286 -26 999 200 0 0 chr10 77592612 77592782 -62723983 + AluSg/x SINE Alu 128 297 -13 403 328 56 56 chr10 77592805 77593241 -62723524 + L1 LINE L1 3217 3660 -2486 1997 164 38 55 chr10 77593241 77593638 -62723127 - MLT1B LTR MaLR 0 390 1 403 328 56 56 chr10 77593638 77593783 -62722982 + L1 LINE L1 3660 3803 -2343 322 258 67 0 chr10 77593893 77593982 -62722783 - MLT1G1 LTR MaLR -18 577 483 419 266 87 17 chr10 77594092 77594265 -62722500 - MLT1H LTR MaLR -325 224 40 627 283 109 32 chr10 77594358 77594813 -62721952 - L2 LINE L2 -213 3059 2554 1081 293 108 35 chr10 77594850 77595759 -62721006 + L2 LINE L2 1861 2835 -479 349 231 61 73 chr10 77595847 77596011 -62720754 + L2 LINE L2 2856 3270 -43 375 224 47 0 chr10 77596040 77596125 -62720640 + L2 LINE L2 3182 3270 -43 207 204 83 80 chr10 77596129 77596242 -62720523 + L2 LINE L2 2896 3003 -310 * 375 224 47 0 chr10 77596233 77596318 -62720447 + L2 LINE L2 3182 3270 -43 207 204 83 80 chr10 77596322 77596435 -62720330 + L2 LINE L2 2896 3003 -310 * 375 224 47 0 chr10 77596426 77596511 -62720254 + L2 LINE L2 3182 3270 -43 207 204 83 80 chr10 77596515 77596628 -62720137 + L2 LINE L2 2896 3003 -310 * 382 214 56 0 chr10 77596619 77596708 -62720057 + L2 LINE L2 3182 3275 -38 222 118 0 0 chr10 77596722 77596756 -62720009 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 2364 91 0 0 chr10 77596812 77597109 -62719656 - AluY SINE Alu -14 297 1 238 195 0 0 chr10 77597203 77597244 -62719521 + L2 LINE L2 3190 3230 -83 2409 87 0 0 chr10 77598480 77598780 -62717985 + AluY SINE Alu 5 304 -7 1135 137 0 0 chr10 77598780 77598941 -62717824 + AluSc SINE Alu 132 292 -17 460 270 107 64 chr10 77598942 77599175 -62717590 - MLT1J LTR MaLR -43 468 226 326 280 76 38 chr10 77599250 77599382 -62717383 - MER63 DNA MER1_type 0 1061 700 304 281 65 22 chr10 77599416 77599555 -62717210 - MLT1J LTR MaLR -366 145 1 253 319 36 22 chr10 77599598 77599736 -62717029 - L1MC/D LINE L1 -2065 5743 5604 727 271 24 35 chr10 77599792 77600047 -62716718 + MIR SINE MIR 3 254 -8 23 0 0 0 chr10 77600307 77600330 -62716435 + AT_rich Low_complexity Low_complexity 1 23 0 1289 174 18 14 chr10 77600838 77601056 -62715709 - MER20 DNA MER1_type 0 219 1 2351 64 24 0 chr10 77602585 77602880 -62713885 - AluY SINE Alu -9 302 1 204 325 16 95 chr10 77602916 77602986 -62713779 - L2 LINE L2 -24 3248 3190 2174 100 0 0 chr10 77602986 77603291 -62713474 - AluSg SINE Alu 0 305 1 204 325 16 95 chr10 77603291 77603345 -62713420 - L2 LINE L2 -82 3190 3133 806 281 24 24 chr10 77603362 77603611 -62713154 + MIR SINE MIR 6 254 -8 1103 260 22 52 chr10 77604226 77604586 -62712179 + MLT1I LTR MaLR 1 349 -60 1129 202 0 28 chr10 77604586 77604799 -62711966 - MER58A DNA MER1_type 0 224 18 326 231 0 0 chr10 77604807 77604872 -62711893 + MLT1I LTR MaLR 344 408 -1 351 165 25 13 chr10 77604889 77604968 -62711797 - L1ME2 LINE L1 0 6098 6019 5651 227 73 38 chr10 77605032 77605842 -62710923 - L1ME2 LINE L1 -363 5735 4955 2306 114 3 0 chr10 77605842 77606149 -62710616 + AluSg SINE Alu 1 308 -2 5651 227 73 38 chr10 77606149 77607312 -62709453 - L1ME2 LINE L1 -1143 4955 3652 2045 114 29 0 chr10 77607312 77607593 -62709172 - AluSq SINE Alu -24 289 1 5651 227 73 38 chr10 77607593 77608112 -62708653 - L1ME2 LINE L1 -2446 3652 3153 1862 224 98 16 chr10 77608110 77608227 -62708538 - L1MB7 LINE L1 -9 6175 6059 * 1686 234 104 19 chr10 77608227 77609148 -62707617 - L1MC4 LINE L1 -743 5403 5046 * 2198 240 87 46 chr10 77609144 77609539 -62707226 - L1ME2 LINE L1 -2911 3169 2792 531 114 45 23 chr10 77609539 77609627 -62707138 + L1MA5A LINE L1 6205 6294 -3 2198 240 87 46 chr10 77609627 77610239 -62706526 - L1ME2 LINE L1 -3288 2792 2120 1708 130 45 0 chr10 77610239 77610409 -62706356 - AluSx SINE Alu -8 304 118 387 0 0 0 chr10 77610409 77610452 -62706313 + (TG)n Simple_repeat Simple_repeat 2 44 0 1708 130 45 0 chr10 77610452 77610527 -62706238 - AluSx SINE Alu -194 118 48 365 241 36 94 chr10 77610528 77610850 -62705915 - L1ME2 LINE L1 -4890 1149 828 * 816 246 61 33 chr10 77610831 77611161 -62705604 - L1M4 LINE L1 -3622 2524 2186 835 105 0 0 chr10 77611161 77611275 -62705490 - AluSg/x SINE Alu -7 302 189 617 268 98 16 chr10 77611278 77611595 -62705170 - L1ME2 LINE L1 -5169 901 559 726 296 66 25 chr10 77611893 77612285 -62704480 - L1ME2 LINE L1 -5606 464 57 381 285 312 13 chr10 77612302 77612621 -62704144 - L2 LINE L2 -323 2990 2577 1484 221 7 4 chr10 77612765 77613046 -62703719 + AluJb SINE Alu 1 282 -30 381 43 0 0 chr10 77613049 77613096 -62703669 + (CA)n Simple_repeat Simple_repeat 2 48 0 191 315 0 0 chr10 77613405 77613459 -62703306 + L2 LINE L2 3210 3263 -9 207 0 0 0 chr10 77613661 77613684 -62703081 + (TG)n Simple_repeat Simple_repeat 2 24 0 30 0 0 0 chr10 77613684 77613714 -62703051 + AT_rich Low_complexity Low_complexity 1 30 0 200 237 17 34 chr10 77613771 77613830 -62702935 - MIR SINE MIR -8 254 197 394 303 28 21 chr10 77613848 77613993 -62702772 + MIR SINE MIR 2 147 -115 1129 230 24 4 chr10 77614192 77614444 -62702321 + MIR SINE MIR 4 260 -2 2316 164 65 7 chr10 77616615 77617018 -62699747 - MSTB LTR MaLR 0 426 1 2147 132 0 0 chr10 77619242 77619537 -62697228 - AluSc SINE Alu -14 295 1 611 299 128 63 chr10 77620011 77620091 -62696674 - L2 LINE L2 -2 3270 3197 2320 100 3 3 chr10 77620091 77620392 -62696373 + AluSx SINE Alu 1 301 -11 611 299 128 63 chr10 77620392 77620567 -62696198 - L2 LINE L2 -75 3197 3035 924 236 0 22 chr10 77620567 77620749 -62696016 - MER45A DNA AcHobo 0 178 1 611 299 128 63 chr10 77620749 77621258 -62695507 - L2 LINE L2 -237 3035 2431 297 238 0 0 chr10 77621259 77621322 -62695443 + MER116 DNA Mariner 5 67 -13 331 350 31 6 chr10 77621408 77621568 -62695197 - L2 LINE L2 -920 2394 2231 550 254 154 0 chr10 77621597 77621766 -62694999 - MIR SINE MIR -66 196 2 226 265 0 0 chr10 77622217 77622266 -62694499 - MER117 DNA MER1_type -86 111 63 199 231 0 0 chr10 77622268 77622307 -62694458 - MIR SINE MIR -63 145 107 258 208 216 48 chr10 77622367 77622492 -62694273 - MIR3 SINE MIR -43 165 20 270 0 0 0 chr10 77622839 77622869 -62693896 + (T)n Simple_repeat Simple_repeat 1 30 0 285 254 26 7 chr10 77624126 77624217 -62692548 + MER5B DNA MER1_type 89 189 0 1135 232 63 75 chr10 77626110 77626524 -62690241 + MLT1I LTR MaLR 1 409 0 742 274 73 0 chr10 77626525 77626729 -62690036 - MIR SINE MIR -5 257 39 241 259 47 47 chr10 77627819 77627904 -62688861 - L2 LINE L2 -3 3269 3185 388 345 148 18 chr10 77627961 77628190 -62688575 + L3 LINE CR1 1308 1566 -11 567 343 77 3 chr10 77628521 77628912 -62687853 - MLT1L LTR MaLR 0 615 196 208 292 53 53 chr10 77629077 77629190 -62687575 - MIR SINE MIR -31 231 119 222 240 110 89 chr10 77629248 77629394 -62687371 - L3 LINE CR1 -2 1575 1427 726 124 93 34 chr10 77630514 77630685 -62686080 + MER33 DNA MER1_type 1 166 -101 10362 180 29 63 chr10 77630685 77632217 -62684548 + L1PB4 LINE L1 2425 4008 -2148 2341 78 0 0 chr10 77632217 77632532 -62684233 + AluY SINE Alu 1 315 0 10362 180 29 63 chr10 77632532 77633461 -62683304 + L1PB4 LINE L1 4008 4957 -1199 845 191 38 6 chr10 77633461 77633618 -62683147 - FRAM SINE Alu -18 158 1 10362 180 29 63 chr10 77633618 77634414 -62682351 + L1PB4 LINE L1 4957 5779 -377 396 0 0 0 chr10 77634415 77634459 -62682306 + (TG)n Simple_repeat Simple_repeat 2 45 0 2083 137 22 22 chr10 77634621 77634979 -62681786 + L1PB4 LINE L1 5789 6146 -10 493 123 110 32 chr10 77634997 77635151 -62681614 + MER33 DNA MER1_type 198 363 0 769 207 103 29 chr10 77635178 77635352 -62681413 + MER58A DNA MER1_type 38 224 0 431 320 15 50 chr10 77637005 77637205 -62679560 - MIR3 SINE MIR -12 196 4 322 252 179 0 chr10 77688833 77688956 -62627809 + MIR SINE MIR 86 230 -32 198 250 0 0 chr10 77689201 77689241 -62627524 - MER5A DNA MER1_type 0 189 150 3642 113 13 6 chr10 77689242 77689784 -62626981 + L1PB1 LINE L1 5605 6150 -1 2266 111 7 0 chr10 77689854 77690161 -62626604 - AluSg1 SINE Alu 0 309 1 277 260 0 26 chr10 77690189 77690266 -62626499 - MER5B DNA MER1_type -92 86 12 197 322 17 0 chr10 77690360 77690419 -62626346 + L2 LINE L2 3137 3196 -76 938 258 178 25 chr10 77691781 77692422 -62624343 + L2 LINE L2 2182 3025 -288 402 250 22 0 chr10 77692429 77692521 -62624244 - MER5A DNA MER1_type -83 106 13 2207 131 3 3 chr10 77692680 77692992 -62623773 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 77695628 77695648 -62621117 + (CTGGGG)n Simple_repeat Simple_repeat 3 22 0 986 238 9 9 chr10 77696093 77696316 -62620449 - MER58A DNA MER1_type 0 224 2 215 161 18 0 chr10 77696638 77696694 -62620071 + (TA)n Simple_repeat Simple_repeat 1 57 0 555 261 27 33 chr10 77696890 77697074 -62619691 + MIR3 SINE MIR 16 198 -10 280 259 47 0 chr10 77697569 77697654 -62619111 - MER5C DNA MER1_type -200 124 36 367 292 26 9 chr10 77697866 77697979 -62618786 - L2 LINE L2 0 3272 3158 346 274 105 0 chr10 77698327 77698451 -62618314 - MIR3 SINE MIR -1 207 71 193 316 0 0 chr10 77698952 77699028 -62617737 + MIR3 SINE MIR 109 184 -24 423 0 0 0 chr10 77699643 77699690 -62617075 + (CA)n Simple_repeat Simple_repeat 2 48 0 181 211 26 0 chr10 77701333 77701371 -62615394 - L2 LINE L2 -4 3268 3230 268 309 39 48 chr10 77701716 77701946 -62614819 + L2 LINE L2 2815 3042 -230 3197 102 173 33 chr10 77702042 77702590 -62614175 - MER51A LTR ERV1 -9 625 1 193 366 12 12 chr10 77702647 77702729 -62614036 + L2 LINE L2 3141 3222 -50 2496 216 55 86 chr10 77705172 77706024 -62610741 + LTR1B LTR ERV1 1 826 0 193 289 92 49 chr10 77706357 77706499 -62610266 - L2 LINE L2 0 3272 3125 205 208 38 38 chr10 77706783 77706836 -62609929 + MIR SINE MIR 23 75 -133 521 207 50 0 chr10 77706925 77707046 -62609719 + MER5A DNA MER1_type 1 127 -62 180 237 17 51 chr10 77707259 77707318 -62609447 - MER5A DNA MER1_type -12 177 121 * 245 308 31 46 chr10 77707273 77707403 -62609362 + MER5A DNA MER1_type 35 162 -27 277 269 35 35 chr10 77707519 77707660 -62609105 + L2 LINE L2 2599 2739 -575 2360 90 10 3 chr10 77708204 77708514 -62608251 + AluSq SINE Alu 1 312 -1 442 306 9 50 chr10 77709243 77709465 -62607300 + MIR SINE MIR 1 213 -49 257 319 88 59 chr10 77710935 77711208 -62605557 - L2 LINE L2 0 3272 2992 2148 102 0 30 chr10 77711332 77711635 -62605130 + AluSg SINE Alu 1 294 -16 393 312 112 39 chr10 77712343 77712728 -62604037 - LTR16C LTR ERVL 0 491 79 545 229 100 0 chr10 77713537 77713677 -62603088 - MER105 DNA DNA -1 203 50 1197 220 66 0 chr10 77713687 77713946 -62602819 - MER58 DNA MER1_type -57 284 9 261 226 0 0 chr10 77713950 77714003 -62602762 - MER105 DNA DNA -151 53 1 369 294 24 29 chr10 77714702 77714872 -62601893 + MIR SINE MIR 48 216 -46 382 242 13 82 chr10 77715622 77715788 -62600977 - MIR SINE MIR -61 147 3 1456 190 92 0 chr10 77715905 77716200 -62600565 + MER58B DNA MER1_type 1 322 -19 2474 78 0 0 chr10 77716658 77716953 -62599812 + AluSc SINE Alu 1 295 -14 1095 167 142 29 chr10 77718697 77718978 -62597787 - L1ME2 LINE L1 0 6164 5852 23 33 0 0 chr10 77720198 77720228 -62596537 + AT_rich Low_complexity Low_complexity 1 30 0 830 231 47 43 chr10 77720410 77720665 -62596100 - MIR SINE MIR -2 260 5 312 27 0 0 chr10 77721903 77721940 -62594825 + (TG)n Simple_repeat Simple_repeat 1 37 0 562 220 152 35 chr10 77721948 77722240 -62594525 - MLT1H1 LTR MaLR -1 554 156 211 261 165 52 chr10 77723141 77723256 -62593509 - MIR SINE MIR -77 185 58 2212 123 0 3 chr10 77723498 77723807 -62592958 + AluSx SINE Alu 2 309 -3 417 290 84 58 chr10 77724017 77724467 -62592298 + L1ME4a LINE L1 4786 5223 -898 444 37 0 0 chr10 77724467 77724521 -62592244 + (TG)n Simple_repeat Simple_repeat 1 54 0 417 290 84 58 chr10 77724521 77725280 -62591485 + L1ME4a LINE L1 5223 6033 -88 219 215 38 38 chr10 77725512 77725591 -62591174 + MIR SINE MIR 21 99 -163 180 188 0 0 chr10 77726455 77726487 -62590278 - MIR SINE MIR -114 148 117 418 275 60 28 chr10 77726875 77727057 -62589708 - MIR SINE MIR -3 259 72 5874 32 1 0 chr10 77727071 77727757 -62589008 - L1PA4 LINE L1 -1792 4354 3668 * 8554 33 7 0 chr10 77727754 77729569 -62587196 + L1PA4 LINE L1 4355 6173 0 501 178 8 85 chr10 77729672 77729790 -62586975 + MER94 DNA DNA 22 130 -4 297 0 0 0 chr10 77730651 77730684 -62586081 + (CA)n Simple_repeat Simple_repeat 1 33 0 2526 126 53 0 chr10 77730927 77731283 -62585482 + THE1C LTR MaLR 1 375 0 216 282 14 0 chr10 77732733 77732804 -62583961 + A-rich Low_complexity Low_complexity 4 75 0 262 287 245 28 chr10 77733249 77733465 -62583300 + L2 LINE L2 2919 3181 -91 3382 90 7 0 chr10 77734383 77734818 -62581947 - L1PA10 LINE L1 -1 6167 5730 700 243 114 56 chr10 77734853 77735309 -62581456 - LTR33A LTR ERVL 0 523 7 1249 169 72 16 chr10 77735736 77736021 -62580744 - L1MB2 LINE L1 -195 5976 5719 1198 178 50 11 chr10 77736133 77736414 -62580351 - L1MB2 LINE L1 -1496 4650 4359 255 250 15 44 chr10 77736476 77736544 -62580221 + L2 LINE L2 3206 3271 -1 432 37 0 0 chr10 77736929 77736983 -62579782 + (CA)n Simple_repeat Simple_repeat 1 54 0 201 345 81 0 chr10 77738373 77738460 -62578305 - L2 LINE L2 -31 3282 3189 1405 192 29 4 chr10 77738501 77738777 -62577988 - AluJo SINE Alu -25 287 5 817 230 31 61 chr10 77738783 77739044 -62577721 + MER112 DNA MER1_type 8 260 0 974 208 135 56 chr10 77739067 77739423 -62577342 - MER58D DNA MER1_type 0 386 3 209 283 17 0 chr10 77740911 77740971 -62575794 + (CA)n Simple_repeat Simple_repeat 2 62 0 2547 74 0 0 chr10 77741519 77741830 -62574935 + AluY SINE Alu 1 311 0 1089 125 6 11 chr10 77743760 77743936 -62572829 - L1MA3 LINE L1 0 6305 6131 820 258 107 4 chr10 77744350 77744575 -62572190 - MIR SINE MIR -10 252 5 432 359 40 5 chr10 77744890 77745088 -62571677 + MIR SINE MIR 3 207 -55 505 261 176 11 chr10 77745214 77745402 -62571363 + MIR SINE MIR 12 230 -32 285 75 0 0 chr10 77745846 77745886 -62570879 + (TG)n Simple_repeat Simple_repeat 2 41 0 399 305 35 21 chr10 77746542 77746683 -62570082 - MIR3 SINE MIR 0 208 66 2341 88 3 13 chr10 77746831 77747137 -62569628 - AluSg SINE Alu -7 303 1 22 0 0 0 chr10 77747247 77747269 -62569496 + AT_rich Low_complexity Low_complexity 1 22 0 189 242 0 0 chr10 77748330 77748363 -62568402 - L2 LINE L2 -107 3165 3133 267 244 0 0 chr10 77750076 77750154 -62566611 + GA-rich Low_complexity Low_complexity 5 82 0 24 0 0 0 chr10 77750824 77750848 -62565917 + AT_rich Low_complexity Low_complexity 1 24 0 1165 312 58 7 chr10 77751059 77751492 -62565273 - MER115 DNA AcHobo -238 455 1 195 266 234 0 chr10 77751571 77751665 -62565100 - L2 LINE L2 0 3313 3198 296 336 0 9 chr10 77752844 77752951 -62563814 + MIR SINE MIR 49 154 -108 22 0 0 0 chr10 77753448 77753470 -62563295 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 77754249 77754272 -62562493 + AT_rich Low_complexity Low_complexity 1 23 0 966 214 0 0 chr10 77754353 77754559 -62562206 + L1MA4 LINE L1 6060 6265 -35 181 200 67 0 chr10 77755111 77755156 -62561609 + MIR SINE MIR 116 163 -99 410 289 20 47 chr10 77755383 77755532 -62561233 - MIR3 SINE MIR -62 146 2 286 265 3 52 chr10 77757194 77757293 -62559472 - MIR SINE MIR -67 141 42 676 251 75 50 chr10 77757784 77758023 -62558742 + MLT1J2 LTR MaLR 204 448 -2 346 309 22 66 chr10 77758032 77758168 -62558597 - L2 LINE L2 -1 3271 3142 586 272 46 12 chr10 77758652 77758825 -62557940 + MIR SINE MIR 76 254 -8 292 294 200 25 chr10 77759590 77759750 -62557015 - MIR3 SINE MIR -17 191 4 23 0 0 0 chr10 77760227 77760250 -62556515 + AT_rich Low_complexity Low_complexity 1 23 0 794 259 94 23 chr10 77760880 77761296 -62555469 + LTR16C LTR ERVL 4 486 -5 416 316 40 33 chr10 77761420 77761674 -62555091 - L2 LINE L2 -223 3049 2794 808 217 57 82 chr10 77762040 77762189 -62554576 + ORSL DNA AcHobo 2 142 -133 2116 97 4 0 chr10 77762189 77762467 -62554298 + AluSg SINE Alu 1 279 -31 808 217 57 82 chr10 77762467 77762598 -62554167 + ORSL DNA AcHobo 142 275 0 207 311 16 0 chr10 77764072 77764133 -62552632 - MIR3 SINE MIR -2 206 145 2260 111 6 19 chr10 77764133 77764448 -62552317 - AluSx SINE Alu -1 311 1 31 0 0 0 chr10 77764453 77764484 -62552281 + AT_rich Low_complexity Low_complexity 1 31 0 325 220 0 0 chr10 77764493 77764552 -62552213 - AluJ/FLAM SINE Alu -243 59 1 414 246 65 43 chr10 77764556 77764694 -62552071 - MIR3 SINE MIR -53 155 15 351 78 0 0 chr10 77765177 77765228 -62551537 + (TG)n Simple_repeat Simple_repeat 2 52 0 265 243 95 0 chr10 77766798 77766872 -62549893 + MIR SINE MIR 85 165 -97 300 172 0 0 chr10 77766940 77766998 -62549767 + (CA)n Simple_repeat Simple_repeat 1 58 0 308 256 13 13 chr10 77767180 77767252 -62549513 - MIR SINE MIR -184 78 6 2625 135 53 19 chr10 77767252 77767666 -62549099 - MSTA LTR MaLR 0 428 1 743 292 17 8 chr10 77767986 77768226 -62548539 - MIR SINE MIR -3 259 18 201 81 27 27 chr10 77768964 77769001 -62547764 + (TC)n Simple_repeat Simple_repeat 2 38 0 310 219 57 105 chr10 77769545 77769650 -62547115 - MIR3 SINE MIR -46 162 63 214 351 53 35 chr10 77770229 77770343 -62546422 - L2 LINE L2 -18 3295 3180 211 280 0 0 chr10 77770611 77770677 -62546088 + (TG)n Simple_repeat Simple_repeat 1 66 0 284 323 51 13 chr10 77771638 77771796 -62544969 - MER117 DNA MER1_type -33 164 1 481 268 137 0 chr10 77771915 77772127 -62544638 - MIR SINE MIR -2 260 17 183 156 0 0 chr10 77774710 77774742 -62542023 + (TGG)n Simple_repeat Simple_repeat 2 33 0 1420 136 56 36 chr10 77774766 77775017 -62541748 - AluSg SINE Alu -6 304 49 637 253 127 0 chr10 77775038 77775204 -62541561 - MIR SINE MIR -69 193 7 376 354 49 6 chr10 77776229 77776393 -62540372 - L3 LINE CR1 -110 1467 1297 529 230 20 0 chr10 77776764 77776864 -62539901 - MIR SINE MIR -114 148 47 1015 258 41 4 chr10 77776901 77777145 -62539620 + MIR SINE MIR 4 256 -6 360 0 0 0 chr10 77777148 77777188 -62539577 + (CAT)n Simple_repeat Simple_repeat 1 40 0 198 425 8 0 chr10 77777785 77777912 -62538853 + MIR SINE MIR 21 148 -60 233 357 0 10 chr10 77778346 77778444 -62538321 + (TG)n Simple_repeat Simple_repeat 2 98 0 292 268 14 0 chr10 77778586 77778657 -62538108 - MIR SINE MIR -131 131 60 340 250 98 22 chr10 77779459 77779632 -62537133 + L1M4 LINE L1 5498 5676 -504 186 322 165 16 chr10 77779914 77780035 -62536730 - L3 LINE CR1 -2 1575 1437 1424 188 11 14 chr10 77781473 77781749 -62535016 + AluJo SINE Alu 38 312 0 204 309 0 0 chr10 77783011 77783066 -62533699 + MER91B DNA MER1_type 2 56 -134 236 29 0 29 chr10 77785096 77785130 -62531635 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 224 325 115 37 chr10 77785340 77785531 -62531234 + MIR3 SINE MIR 3 208 0 2008 173 25 8 chr10 77785638 77785997 -62530768 - MLT1A1 LTR MaLR 0 365 1 24 32 0 0 chr10 77786315 77786346 -62530419 + AT_rich Low_complexity Low_complexity 1 31 0 264 311 74 33 chr10 77789719 77789841 -62526924 + L2 LINE L2 3141 3267 -5 222 118 0 0 chr10 77789875 77789909 -62526856 + (TG)n Simple_repeat Simple_repeat 2 35 0 469 319 28 0 chr10 77792420 77792602 -62524163 - MIR SINE MIR -73 189 3 218 175 0 0 chr10 77792915 77792955 -62523810 - L2 LINE L2 -3 3310 3271 1153 252 84 101 chr10 77793017 77794775 -62521990 - L1ME LINE L1 -4371 1709 6 538 241 37 31 chr10 77794779 77794941 -62521824 - Charlie8 DNA MER1_type -2248 169 7 356 313 41 14 chr10 77794947 77795094 -62521671 - MIR3 SINE MIR -48 160 10 229 353 43 14 chr10 77795988 77796127 -62520638 - MIR3 SINE MIR -22 186 44 445 190 0 0 chr10 77796288 77796367 -62520398 + MER116 DNA Mariner 2 80 0 599 236 80 5 chr10 77796662 77796861 -62519904 + MIR SINE MIR 46 259 -3 203 91 0 68 chr10 77798106 77798150 -62518615 + (TG)n Simple_repeat Simple_repeat 2 42 0 387 312 35 12 chr10 77800060 77800230 -62516535 - MER117 DNA MER1_type -23 174 1 2252 112 7 0 chr10 77801972 77802268 -62514497 - AluSx SINE Alu -13 299 2 1835 142 0 30 chr10 77802297 77802593 -62514172 - AluJo SINE Alu -24 288 2 1421 223 103 83 chr10 77802983 77803490 -62513275 + MLT1E2 LTR MaLR 1 520 -106 2323 218 114 15 chr10 77803650 77804316 -62512449 + HsTC2a DNA Tc2 1 732 -12 1358 227 0 4 chr10 77805148 77805408 -62511357 - MLT1F1 LTR MaLR -2 565 307 746 223 81 57 chr10 77805836 77806119 -62510646 - MLT1J LTR MaLR -138 373 84 2269 119 19 38 chr10 77807936 77808307 -62508458 - THE1B LTR MaLR 0 364 1 186 43 0 0 chr10 77808733 77808756 -62508009 + (CA)n Simple_repeat Simple_repeat 1 23 0 305 315 0 9 chr10 77808851 77808962 -62507803 + (TA)n Simple_repeat Simple_repeat 2 111 0 2112 122 0 16 chr10 77809819 77810130 -62506635 - AluY SINE Alu -5 306 1 274 227 28 85 chr10 77810367 77810508 -62506257 - L1ME4a LINE L1 -65 6056 5924 293 302 17 43 chr10 77810644 77810760 -62506005 - L1ME4a LINE L1 -462 5659 5547 2763 169 22 0 chr10 77810952 77811409 -62505356 - MLT1C LTR MaLR 0 467 1 282 191 16 0 chr10 77811461 77811524 -62505241 + MIR3 SINE MIR 96 159 -49 1030 189 0 5 chr10 77811525 77811715 -62505050 + MER5A DNA MER1_type 1 189 0 190 316 51 31 chr10 77812781 77812879 -62503886 + MIR SINE MIR 16 115 -93 559 251 44 96 chr10 77813903 77813974 -62502791 + MIR SINE MIR 6 79 -183 2070 147 10 3 chr10 77813974 77814281 -62502484 - AluSx SINE Alu -3 309 1 559 251 44 96 chr10 77814281 77814480 -62502285 + MIR SINE MIR 79 262 0 267 230 0 35 chr10 77815137 77815224 -62501541 + MER113 DNA MER1_type? 9 92 -429 631 253 5 50 chr10 77815453 77815651 -62501114 + MIR SINE MIR 46 234 -28 248 298 113 24 chr10 77815708 77815832 -62500933 + L2 LINE L2 3138 3272 0 410 282 23 23 chr10 77815927 77816058 -62500707 + MIR SINE MIR 20 150 -112 284 319 34 17 chr10 77819407 77819526 -62497239 + MIR SINE MIR 30 150 -58 23 33 0 0 chr10 77821492 77821522 -62495243 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr10 77822085 77822109 -62494656 + (CTGGGG)n Simple_repeat Simple_repeat 5 28 0 474 18 0 0 chr10 77822234 77822289 -62494476 + (CAG)n Simple_repeat Simple_repeat 1 55 0 639 216 41 62 chr10 77822305 77822499 -62494266 - MIR SINE MIR -26 236 47 2405 94 0 3 chr10 77822635 77822934 -62493831 - AluSq SINE Alu -14 299 2 608 234 28 14 chr10 77823585 77823730 -62493035 + MIR SINE MIR 32 178 -84 792 257 70 0 chr10 77823766 77823980 -62492785 - MIR SINE MIR -28 234 6 220 305 0 0 chr10 77823990 77824049 -62492716 + MIR SINE MIR 193 251 -11 233 221 176 38 chr10 77824298 77824429 -62492336 - MIR SINE MIR -35 227 79 1025 310 72 32 chr10 77825012 77825806 -62490959 + L2 LINE L2 2443 3279 -34 943 254 52 16 chr10 77825820 77826072 -62490693 - MIR SINE MIR 0 262 2 189 171 0 0 chr10 77826327 77826362 -62490403 + T-rich Low_complexity Low_complexity 4 38 0 869 231 10 5 chr10 77827010 77827209 -62489556 + MIR SINE MIR 16 215 -47 1454 249 64 35 chr10 77827354 77827841 -62488924 - MLT1J LTR MaLR 0 511 11 746 290 69 1 chr10 77828156 77828373 -62488392 + MIR SINE MIR 34 262 0 198 233 0 0 chr10 77828374 77828434 -62488331 + (TTA)n Simple_repeat Simple_repeat 1 60 0 254 281 84 36 chr10 77828629 77828796 -62487969 - MIR SINE MIR -1 261 87 619 179 8 8 chr10 77829206 77829329 -62487436 - L1MC1 LINE L1 0 6333 6211 252 269 15 0 chr10 77829549 77829616 -62487149 + L2 LINE L2 3205 3272 0 265 261 15 0 chr10 77830499 77830564 -62486201 - L2 LINE L2 -2 3311 3246 2122 108 0 0 chr10 77830787 77831084 -62485681 + AluSc SINE Alu 1 297 -12 618 325 26 32 chr10 77832051 77832299 -62484466 - MIR SINE MIR -15 247 3 263 274 0 0 chr10 77832799 77832861 -62483904 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 2013 135 0 0 chr10 77832873 77833170 -62483595 - AluSx SINE Alu -15 297 1 978 306 67 25 chr10 77834509 77835028 -62481737 - MLT1K LTR MaLR -33 555 15 327 283 0 9 chr10 77835669 77835775 -62480990 - MER103 DNA DNA -57 109 5 1039 211 95 69 chr10 77836119 77836508 -62480257 - MER113 DNA MER1_type? -28 493 95 822 216 70 0 chr10 77836509 77836680 -62480085 - MER20 DNA MER1_type 0 219 37 284 279 199 32 chr10 77837856 77838107 -62478658 + L2 LINE L2 2669 2961 -353 267 355 97 32 chr10 77838218 77838404 -62478361 + L2 LINE L2 3073 3270 -2 2148 128 102 10 chr10 77838421 77838813 -62477952 - MSTA LTR MaLR 0 428 1 435 279 47 43 chr10 77838860 77839045 -62477720 - MIR SINE MIR -55 207 18 213 289 82 52 chr10 77840143 77840240 -62476525 + MIR SINE MIR 52 151 -111 228 271 29 0 chr10 77840348 77840418 -62476347 - L1MC4 LINE L1 -1317 6725 6654 430 284 65 0 chr10 77840754 77840909 -62475856 + MER117 DNA MER1_type 2 166 -31 532 239 165 18 chr10 77841228 77841446 -62475319 - MIR SINE MIR 0 262 13 285 29 0 0 chr10 77842177 77842211 -62474554 + (TAAAAA)n Simple_repeat Simple_repeat 4 37 0 255 301 115 39 chr10 77842574 77842676 -62474089 - MIR SINE MIR -34 228 109 2043 125 0 0 chr10 77842676 77842965 -62473800 + AluSx SINE Alu 11 299 -13 255 301 115 39 chr10 77842965 77843018 -62473747 - MIR SINE MIR -153 109 61 297 260 50 30 chr10 77844700 77844800 -62471965 + MIR SINE MIR 43 144 -64 181 380 13 0 chr10 77845843 77845922 -62470843 - MIR SINE MIR -42 220 141 2455 57 0 13 chr10 77845933 77846248 -62470517 - AluY SINE Alu 0 311 1 724 279 73 59 chr10 77846267 77846759 -62470006 - L1ME4a LINE L1 -1 6120 5622 190 265 29 15 chr10 77846815 77846883 -62469882 - MIR SINE MIR -113 149 81 189 244 28 45 chr10 77847617 77847705 -62469060 + MIR SINE MIR 58 148 -60 468 304 198 0 chr10 77847731 77847948 -62468817 - MIR SINE MIR 0 262 3 292 349 20 53 chr10 77848191 77848343 -62468422 - L2 LINE L2 0 3272 3126 225 196 0 39 chr10 77850176 77850227 -62466538 - L2 LINE L2 -19 3294 3246 299 362 11 11 chr10 77850231 77850325 -62466440 - MIR3 SINE MIR -112 96 3 202 151 12 70 chr10 77850824 77850910 -62465855 + (TTTA)n Simple_repeat Simple_repeat 2 82 0 1294 198 29 117 chr10 77851203 77851613 -62465152 - MLT1A2 LTR MaLR 0 374 1 329 306 180 16 chr10 77851613 77851796 -62464969 + MIR SINE MIR 5 217 -45 21 0 0 0 chr10 77852175 77852196 -62464569 + AT_rich Low_complexity Low_complexity 1 21 0 291 325 103 56 chr10 77852631 77852883 -62463882 - L2 LINE L2 -25 3288 3025 217 214 12 12 chr10 77853208 77853292 -62463473 + (TGAA)n Simple_repeat Simple_repeat 1 84 0 220 257 30 163 chr10 77853696 77853898 -62462867 + MER5A DNA MER1_type 4 189 0 2417 80 0 0 chr10 77853933 77854244 -62462521 - AluY SINE Alu 0 311 1 870 138 31 31 chr10 77854701 77854860 -62461905 + FRAM SINE Alu 1 40 0 2139 75 4 0 chr10 77854866 77855181 -62461584 + AluY SINE Alu 1 316 0 477 50 0 0 chr10 77856201 77856261 -62460504 + (TG)n Simple_repeat Simple_repeat 2 61 0 207 303 0 15 chr10 77856462 77856528 -62460237 + C-rich Low_complexity Low_complexity 4 68 0 465 262 28 28 chr10 77858109 77858250 -62458515 - MIR3 SINE MIR -28 180 40 659 222 78 6 chr10 77858251 77858418 -62458347 + MER97c DNA MER1_type? 1 179 -911 2241 95 0 0 chr10 77859532 77859827 -62456938 - AluY SINE Alu -14 297 3 21 0 0 0 chr10 77862507 77862528 -62454237 + AT_rich Low_complexity Low_complexity 1 21 0 386 253 83 29 chr10 77863022 77863245 -62453520 + LTR16C LTR ERVL 3 292 -199 699 231 88 6 chr10 77863285 77863324 -62453441 + MER58A DNA MER1_type 28 62 -2358 405 90 0 0 chr10 77863324 77863391 -62453374 + (TA)n Simple_repeat Simple_repeat 1 67 0 699 231 88 6 chr10 77863391 77863533 -62453232 + MER58A DNA MER1_type 62 224 0 551 293 90 0 chr10 77863539 77863706 -62453059 + LTR16C LTR ERVL 304 485 -6 1575 258 104 20 chr10 77864375 77864922 -62451843 - MLT1E LTR MaLR 0 593 1 208 216 14 27 chr10 77865564 77865638 -62451127 + T-rich Low_complexity Low_complexity 4 76 0 199 256 0 0 chr10 77865811 77865854 -62450911 - MIR SINE MIR -6 256 214 1108 173 22 44 chr10 77866181 77866406 -62450359 + MLT1C LTR MaLR 4 223 -244 854 257 30 13 chr10 77866468 77866705 -62450060 + MLT1C LTR MaLR 224 464 -3 1132 198 33 0 chr10 77867407 77867619 -62449146 - MER20 DNA MER1_type 0 219 1 2053 113 0 13 chr10 77867785 77868087 -62448678 - AluSc SINE Alu -11 298 1 540 267 23 0 chr10 77868216 77868347 -62448418 - MER94 DNA DNA 0 134 1 879 254 171 9 chr10 77868481 77868827 -62447938 + HsTC2 DNA Tc2 4 405 -1493 325 203 51 34 chr10 77868855 77868973 -62447792 + HsTC2 DNA Tc2 1777 1896 -2 316 311 98 12 chr10 77869021 77869185 -62447580 - MER5A DNA MER1_type 0 189 12 185 229 0 21 chr10 77869653 77869701 -62447064 - MIR SINE MIR -7 255 209 236 265 29 29 chr10 77871433 77871501 -62445264 + L2 LINE L2 3199 3266 -6 239 189 263 74 chr10 77871920 77872015 -62444750 + L2 LINE L2 3201 3313 0 26 30 0 0 chr10 77872290 77872323 -62444442 + AT_rich Low_complexity Low_complexity 1 33 0 324 382 19 6 chr10 77872776 77872933 -62443832 - MIR3 SINE MIR -12 196 38 199 282 70 14 chr10 77874715 77874786 -62441979 + L2 LINE L2 3137 3211 -61 320 269 13 0 chr10 77875126 77875204 -62441561 + L2 LINE L2 3194 3272 0 334 311 84 3 chr10 77875515 77875697 -62441068 + MIR3 SINE MIR 3 205 -3 384 275 263 36 chr10 77876010 77876424 -62440341 - L3 LINE CR1 -5 1572 1065 252 265 36 0 chr10 77876709 77876792 -62439973 - L1MC4 LINE L1 -1332 6710 6625 699 271 66 13 chr10 77877000 77877317 -62439448 - L1ME4a LINE L1 -210 5911 5578 233 345 35 14 chr10 77877434 77877579 -62439186 - L1ME4a LINE L1 -2406 5402 5255 555 330 87 37 chr10 77877663 77878036 -62438729 - L3 LINE CR1 -734 843 447 2333 78 3 0 chr10 77878036 77878332 -62438433 - AluSc SINE Alu -12 297 1 555 330 87 37 chr10 77878332 77878361 -62438404 - L3 LINE CR1 -1130 447 421 1138 189 18 0 chr10 77879108 77879325 -62437440 - AluJo SINE Alu -7 305 85 208 211 0 0 chr10 77879466 77879504 -62437261 + (TG)n Simple_repeat Simple_repeat 1 38 0 2027 102 0 0 chr10 77879745 77880019 -62436746 + AluSc SINE Alu 20 293 -16 204 286 41 61 chr10 77880173 77880271 -62436494 - L2 LINE L2 -13 3259 3164 7966 69 12 0 chr10 77883501 77884561 -62432204 + L1P LINE L1 4208 5280 -866 1438 254 4 79 chr10 77884699 77885195 -62431570 - L1ME4a LINE L1 -1924 4222 3764 309 194 15 0 chr10 77885934 77886001 -62430764 - L1ME4a LINE L1 -3705 2441 2374 1018 187 30 15 chr10 77886003 77886206 -62430559 - MER61C LTR ERV1 0 434 229 528 255 7 27 chr10 77887773 77887922 -62428843 + L2 LINE L2 3168 3313 0 255 296 142 18 chr10 77887941 77888110 -62428655 - MIR SINE MIR -15 247 58 221 402 0 11 chr10 77888178 77888270 -62428495 - MIR3 SINE MIR -51 157 67 1502 194 85 15 chr10 77888438 77888779 -62427986 - MLT1A1 LTR MaLR 0 365 1 316 297 63 0 chr10 77889069 77889180 -62427585 + MIR3 SINE MIR 46 163 -45 323 310 158 5 chr10 77890357 77890541 -62426224 + MIR SINE MIR 51 262 0 314 282 77 0 chr10 77890631 77890709 -62426056 - MIR SINE MIR -101 107 24 523 391 28 15 chr10 77890851 77891240 -62425525 + L3 LINE CR1 602 995 -582 826 119 0 42 chr10 77892812 77892955 -62423810 - L1MA2 LINE L1 0 6304 6168 18286 36 1 1 chr10 77894996 77897827 -62418938 - L1PA4 LINE L1 -149 6006 3174 786 252 83 16 chr10 77898797 77899039 -62417726 + MIR SINE MIR 5 262 0 340 298 104 32 chr10 77899158 77899329 -62417436 - MIR SINE MIR -61 147 18 186 43 0 0 chr10 77899744 77899767 -62416998 + (TC)n Simple_repeat Simple_repeat 1 23 0 272 223 57 102 chr10 77900104 77900314 -62416451 + MIR SINE MIR 11 212 -50 270 246 0 16 chr10 77900552 77900613 -62416152 + MIR SINE MIR 48 107 -155 1267 187 122 51 chr10 77901714 77902205 -62414560 - MER69 DNA AcHobo 0 2526 2001 864 130 0 107 chr10 77902205 77902382 -62414383 + AluSg/x SINE Alu 132 289 -21 1361 271 40 25 chr10 77902527 77902930 -62413835 - MER69 DNA AcHobo -2112 414 6 222 91 0 0 chr10 77903680 77903713 -62413052 + (T)n Simple_repeat Simple_repeat 1 33 0 2929 220 57 83 chr10 77903923 77904458 -62412307 - L1M4 LINE L1 -2456 3690 3143 4437 113 15 62 chr10 77904458 77905183 -62411582 - LTR8 LTR ERV1 0 691 1 2929 220 57 83 chr10 77905183 77905999 -62410766 - L1M4 LINE L1 -3003 3143 2374 1806 141 19 26 chr10 77906001 77906340 -62410425 - MER61B LTR ERV1 0 425 1 664 275 106 33 chr10 77906502 77906833 -62409932 - L1MCc LINE L1 -5836 587 233 410 193 64 18 chr10 77906838 77906947 -62409818 - L1MCc LINE L1 -6286 137 24 230 209 209 0 chr10 77906954 77907045 -62409720 + MER5C DNA MER1_type 214 323 -1 1915 134 3 3 chr10 77907258 77907549 -62409216 + AluSx SINE Alu 2 292 -20 2134 176 32 58 chr10 77907552 77908058 -62408707 - L1MB5 LINE L1 -8 6166 5677 * 2263 175 139 7 chr10 77908053 77908448 -62408317 - L1PA15 LINE L1 -6 6159 5677 1647 159 17 7 chr10 77908448 77908743 -62408022 - AluJo SINE Alu -5 307 10 2263 175 139 7 chr10 77908743 77908874 -62407891 - L1PA15 LINE L1 -488 5677 5565 263 287 25 76 chr10 77909055 77909212 -62407553 + L3 LINE CR1 1331 1479 -98 321 296 105 43 chr10 77909470 77909571 -62407194 - L1ME LINE L1 -5775 295 179 2143 112 0 0 chr10 77909571 77909865 -62406900 + AluSg1 SINE Alu 1 294 -15 321 296 105 43 chr10 77909865 77909925 -62406840 - L1ME LINE L1 -5891 179 124 206 95 24 0 chr10 77909925 77909967 -62406798 + (TG)n Simple_repeat Simple_repeat 2 44 0 209 312 11 21 chr10 77909971 77910064 -62406701 + L2 LINE L2 3180 3271 -42 556 286 182 59 chr10 77910080 77910524 -62406241 + LTR33 LTR ERVL 16 514 -7 864 257 44 108 chr10 77910643 77911145 -62405620 + L2 LINE L2 2816 3285 -28 1046 233 72 89 chr10 77911146 77911552 -62405213 + MLT1C LTR MaLR 1 399 -68 2129 114 7 0 chr10 77911552 77911849 -62404916 - AluSx SINE Alu -13 299 1 1046 233 72 89 chr10 77911849 77911915 -62404850 + MLT1C LTR MaLR 399 465 -2 316 316 86 0 chr10 77912288 77912427 -62404338 - L3b LINE CR1 -208 1375 1225 974 143 107 0 chr10 77913018 77913186 -62403579 - MER5A DNA MER1_type 0 189 4 775 101 0 93 chr10 77913546 77913685 -62403080 - L1PA8 LINE L1 0 6172 6047 386 219 18 18 chr10 77914373 77914487 -62402278 + L1ME4a LINE L1 5963 6076 -45 185 267 78 44 chr10 77914543 77914633 -62402132 + L2 LINE L2 2962 3054 -218 1032 326 108 58 chr10 77915215 77916342 -62400423 + L2 LINE L2 1527 2764 -508 2781 76 3 0 chr10 77916342 77916696 -62400069 + THE1A LTR MaLR 1 355 0 1032 326 108 58 chr10 77916696 77917227 -62399538 + L2 LINE L2 2764 3267 -5 355 307 150 13 chr10 77922171 77922324 -62394441 - MIR3 SINE MIR -3 205 32 225 0 0 0 chr10 77924683 77924708 -62392057 + (T)n Simple_repeat Simple_repeat 1 25 0 246 337 6 34 chr10 77925236 77925411 -62391354 + CT-rich Low_complexity Low_complexity 5 174 0 605 264 141 9 chr10 77925936 77926156 -62390609 + L3 LINE CR1 1169 1417 -160 1916 126 44 0 chr10 77926834 77927128 -62389637 - AluSx SINE Alu -5 307 1 1093 234 10 0 chr10 77927862 77928071 -62388694 - MER58A DNA MER1_type -13 211 1 266 150 0 33 chr10 77928521 77928581 -62388184 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 198 143 0 0 chr10 77928587 77928622 -62388143 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 364 313 8 15 chr10 77932006 77932137 -62384628 - MIR3 SINE MIR -4 204 75 890 167 11 23 chr10 77934189 77934363 -62382402 + MER5A DNA MER1_type 18 189 0 247 281 58 58 chr10 77934367 77934488 -62382277 + L2 LINE L2 3193 3313 0 2006 119 63 0 chr10 77935152 77935438 -62381327 + AluSx SINE Alu 9 312 0 7716 174 110 21 chr10 77935790 77937335 -62379430 - MER52A LTR ERV1 0 1755 1 266 182 208 0 chr10 77937647 77937724 -62379041 + L2 LINE L2 3208 3300 -13 184 243 14 54 chr10 77937792 77937866 -62378899 - L2 LINE L2 -83 3230 3160 277 326 8 23 chr10 77940804 77940936 -62375829 - MIR SINE MIR -63 145 16 4332 108 7 0 chr10 77941270 77941880 -62374885 + L1PA14 LINE L1 5547 6160 -1 197 274 194 16 chr10 77941973 77942097 -62374668 - MIR3 SINE MIR -31 177 32 369 0 0 0 chr10 77943001 77943042 -62373723 + (TG)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr10 77943091 77943112 -62373653 + AT_rich Low_complexity Low_complexity 1 21 0 228 111 0 0 chr10 77943905 77943941 -62372824 + (TG)n Simple_repeat Simple_repeat 1 36 0 403 243 126 0 chr10 77944265 77944376 -62372389 + L2 LINE L2 3188 3312 -1 454 236 139 24 chr10 77946040 77946240 -62370525 + MLT1H LTR MaLR 1 202 -347 2116 143 3 37 chr10 77948701 77949050 -62367715 - MER1B DNA MER1_type 0 337 1 187 192 167 0 chr10 77950372 77950450 -62366315 + MIR SINE MIR 107 197 -65 1071 230 105 42 chr10 77950624 77950985 -62365780 - MLT1B LTR MaLR -6 384 1 364 245 110 19 chr10 77952588 77952794 -62363971 + MIR SINE MIR 22 248 -14 183 42 0 0 chr10 77953516 77953540 -62363225 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 219 150 0 25 chr10 77953886 77953926 -62362839 + (TG)n Simple_repeat Simple_repeat 2 40 0 325 172 35 0 chr10 77955157 77955215 -62361550 - MLT1J2 LTR MaLR 0 450 391 717 285 95 0 chr10 77955257 77955478 -62361287 - MLT1J2 LTR MaLR -139 311 70 1226 179 35 74 chr10 77955484 77955769 -62360996 + MLT1B LTR MaLR 3 276 -114 2473 75 0 10 chr10 77956137 77956444 -62360321 + AluY SINE Alu 1 304 -7 1684 136 87 0 chr10 77960472 77960736 -62356029 + AluJb SINE Alu 1 287 -25 213 293 32 16 chr10 77961019 77961142 -62355623 + (TA)n Simple_repeat Simple_repeat 1 125 0 1112 220 39 9 chr10 77961307 77961539 -62355226 - MER8 DNA MER2_type 0 239 1 528 314 78 26 chr10 77961890 77962284 -62354481 + L1M3 LINE L1 5410 5818 -352 1121 226 51 14 chr10 77962322 77962790 -62353975 + MER74A LTR ERVL 1 594 -28 2318 95 0 16 chr10 77962825 77963129 -62353636 + AluSx SINE Alu 1 299 -13 269 316 0 0 chr10 77963131 77963210 -62353555 - MER103 DNA DNA -84 82 4 189 0 0 0 chr10 77963451 77963472 -62353293 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 189 0 0 0 chr10 77963473 77963494 -62353271 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2220 124 3 0 chr10 77964809 77965107 -62351658 - AluSx SINE Alu -13 299 1 1570 72 5 24 chr10 77965445 77965653 -62351112 - AluY SINE Alu -10 301 98 224 235 12 71 chr10 77965792 77965877 -62350888 + GA-rich Low_complexity Low_complexity 3 82 0 488 259 287 3 chr10 77966498 77966787 -62349978 - L2 LINE L2 -5 3308 2938 773 258 53 13 chr10 77967017 77967242 -62349523 + MIR SINE MIR 29 262 0 1728 187 13 13 chr10 77967846 77968151 -62348614 + AluJb SINE Alu 1 305 -7 252 266 31 0 chr10 77971867 77971931 -62344834 + (CATG)n Simple_repeat Simple_repeat 2 67 0 24 32 0 0 chr10 77973622 77973653 -62343112 + AT_rich Low_complexity Low_complexity 1 31 0 804 278 28 8 chr10 77974442 77974697 -62342068 + MIR SINE MIR 1 260 -2 1695 145 7 24 chr10 77975286 77975583 -62341182 - AluSq SINE Alu -19 294 3 448 214 70 82 chr10 77976137 77976408 -62340357 - L1ME LINE L1 -515 5606 5338 204 275 25 62 chr10 77976479 77976559 -62340206 + L2 LINE L2 3237 3313 0 2133 74 0 64 chr10 77977448 77977744 -62339021 - AluY SINE Alu -34 277 1 2012 170 76 36 chr10 77980116 77980563 -62336202 - MLT1C LTR MaLR 0 467 3 202 204 0 0 chr10 77980679 77980723 -62336042 + L2 LINE L2 3270 3313 0 2727 162 14 65 chr10 77984715 77985171 -62331594 + MER34C LTR ERV1 41 464 -121 1736 203 79 85 chr10 77985171 77985816 -62330949 + LTR48B LTR ERV1 4 644 0 2727 162 14 65 chr10 77985816 77985933 -62330832 + MER34C LTR ERV1 464 585 0 354 263 8 45 chr10 77987144 77987277 -62329488 - L1ME3A LINE L1 -273 5897 5770 45320 37 2 1 chr10 77987290 77993461 -62323304 - L1PA4 LINE L1 0 6155 4 696 253 4 38 chr10 77993534 77993771 -62322994 - L1ME3A LINE L1 -521 5641 5413 331 356 22 7 chr10 77993941 77994076 -62322689 + MIR SINE MIR 16 152 -56 331 263 154 61 chr10 77995934 77996181 -62320584 + L2 LINE L2 3032 3301 -12 346 140 40 120 chr10 77996186 77996286 -62320479 - MER34C LTR ERV1 0 585 494 493 277 29 0 chr10 77996417 77996554 -62320211 - L1ME3A LINE L1 -1907 4239 4099 4585 183 18 13 chr10 77996658 77997463 -62319302 - L1MB7 LINE L1 -40 6144 5327 2356 87 0 10 chr10 77997463 77997762 -62319003 - AluSg SINE Alu -14 296 1 4585 183 18 13 chr10 77997762 77998196 -62318569 - L1MB7 LINE L1 -857 5327 4897 260 198 79 59 chr10 77998169 77998270 -62318495 - L1MB7 LINE L1 -2017 4129 4027 * 580 287 65 29 chr10 77999355 77999744 -62317021 - MLT1J LTR MaLR -58 453 5 279 270 14 0 chr10 78000347 78000421 -62316344 + MLT1I LTR MaLR 329 403 -6 1635 161 17 30 chr10 78001955 78002254 -62314511 + AluJo SINE Alu 3 297 -15 2180 143 29 18 chr10 78002363 78002706 -62314059 - MER7A DNA MER2_type -1 345 1 213 171 0 0 chr10 78003288 78003323 -62313442 - MIR3 SINE MIR -16 192 158 356 315 83 28 chr10 78003328 78003617 -62313148 + L1ME3 LINE L1 5522 5826 -336 840 102 25 0 chr10 78003912 78004030 -62312735 + L1MC/D LINE L1 5396 5516 -817 198 296 70 14 chr10 78004492 78004563 -62312202 - L2 LINE L2 -61 3211 3137 229 189 263 74 chr10 78005642 78005737 -62311028 + L2 LINE L2 3201 3313 0 22 91 0 0 chr10 78006012 78006045 -62310720 + AT_rich Low_complexity Low_complexity 1 33 0 2080 121 0 3 chr10 78006774 78007072 -62309693 + AluSc SINE Alu 1 297 -12 182 259 35 17 chr10 78010281 78010339 -62306426 + MIR3 SINE MIR 133 191 -17 235 229 125 31 chr10 78011632 78011728 -62305037 + MIR3 SINE MIR 100 204 -4 356 283 44 39 chr10 78011855 78012060 -62304705 + L3 LINE CR1 1147 1352 -225 1510 174 33 19 chr10 78012162 78012432 -62304333 + AluJb SINE Alu 1 274 -38 222 257 69 30 chr10 78012454 78012555 -62304210 + L3 LINE CR1 1371 1475 -102 254 239 23 80 chr10 78013291 78013379 -62303386 - L2 LINE L2 -4 3268 3186 557 278 31 12 chr10 78013476 78013638 -62303127 - MIR SINE MIR -95 167 3 3576 144 83 10 chr10 78014717 78015330 -62301435 + L1MB2 LINE L1 5504 6161 -10 252 367 50 0 chr10 78015355 78015475 -62301290 + MIR SINE MIR 19 144 -64 417 20 0 0 chr10 78015599 78015649 -62301116 + (TG)n Simple_repeat Simple_repeat 2 51 0 1539 172 25 21 chr10 78016020 78016299 -62300466 - AluJo SINE Alu -22 290 11 2436 203 65 24 chr10 78016811 78017348 -62299417 + MER119 DNA MER1_type 7 565 -18 2194 83 47 0 chr10 78017371 78017647 -62299118 - AluSq SINE Alu -24 289 1 231 133 33 17 chr10 78017873 78017933 -62298832 + CT-rich Low_complexity Low_complexity 4 64 0 276 194 75 0 chr10 78018548 78018615 -62298150 - L1ME4a LINE L1 -1 6120 6049 25 31 0 0 chr10 78018850 78018882 -62297883 + AT_rich Low_complexity Low_complexity 1 32 0 475 183 78 0 chr10 78018910 78019025 -62297740 + MER5C DNA MER1_type 1 124 -200 3059 193 36 81 chr10 78019292 78020176 -62296589 - L1ME1 LINE L1 -6 6160 5317 696 55 22 0 chr10 78020191 78020282 -62296483 + AluY SINE Alu 206 298 -13 881 225 9 5 chr10 78020283 78020501 -62296264 - L1ME1 LINE L1 -833 5313 5095 4981 156 21 8 chr10 78020661 78021480 -62295285 + L1MC1 LINE L1 5500 6328 -5 529 243 126 42 chr10 78021632 78021895 -62294870 + L1MC5 LINE L1 7609 7893 -68 453 230 3 133 chr10 78023535 78023657 -62293108 + MIR SINE MIR 16 109 -138 2503 166 47 0 chr10 78023657 78024066 -62292699 - MSTA LTR MaLR 0 428 1 453 230 3 133 chr10 78024066 78024136 -62292629 + MIR SINE MIR 109 186 -61 244 322 96 27 chr10 78025331 78025477 -62291288 - MIR3 SINE MIR -3 205 50 790 238 14 72 chr10 78025687 78025910 -62290855 + MER58C DNA MER1_type 2 211 -4 180 0 0 0 chr10 78026022 78026042 -62290723 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2176 141 0 0 chr10 78026229 78026542 -62290223 - AluSq SINE Alu 0 313 1 1996 152 3 0 chr10 78026552 78026841 -62289924 - AluSx SINE Alu -22 290 1 1926 152 16 9 chr10 78026841 78027156 -62289609 - THE1C LTR MaLR -58 317 1 259 305 127 0 chr10 78027159 78027277 -62289488 - L2 LINE L2 -3 3269 3137 6343 115 8 2 chr10 78027581 78029298 -62287467 - L1PA13 LINE L1 -2 6161 4379 379 263 16 42 chr10 78031716 78031849 -62284916 + MIR SINE MIR 31 159 -68 334 289 0 44 chr10 78032140 78032254 -62284511 + MIR SINE MIR 153 261 -1 1669 116 0 13 chr10 78032476 78032708 -62284057 - AluSx SINE Alu -83 229 1 3373 255 77 54 chr10 78033012 78033106 -62283659 + L1MEc LINE L1 36 126 -6089 1985 133 60 100 chr10 78033106 78033556 -62283209 - MSTB1 LTR MaLR 0 432 1 3373 255 77 54 chr10 78033556 78034938 -62281827 + L1MEc LINE L1 126 1475 -4740 2204 117 0 0 chr10 78034938 78035229 -62281536 - AluY SINE Alu -20 291 1 3373 255 77 54 chr10 78035229 78035456 -62281309 + L1MEc LINE L1 1475 1695 -4520 774 48 10 0 chr10 78035456 78035559 -62281206 + L1MA1 LINE L1 6195 6298 -4 3373 255 77 54 chr10 78035559 78035752 -62281013 + L1MEc LINE L1 1695 3905 -2310 2057 114 3 10 chr10 78036107 78036404 -62280361 + AluSx SINE Alu 1 295 -17 421 272 140 43 chr10 78036504 78036739 -62280026 + MIR SINE MIR 5 262 0 2358 85 3 0 chr10 78037781 78038075 -62278690 + AluSx SINE Alu 1 295 -17 286 306 8 48 chr10 78040562 78040686 -62276079 - MIR3 SINE MIR -6 202 84 365 348 135 28 chr10 78040705 78041061 -62275704 + L3 LINE CR1 1059 1452 -125 2266 96 20 3 chr10 78041547 78041848 -62274917 - AluSg SINE Alu -4 306 1 227 324 41 41 chr10 78043261 78043337 -62273428 + MIR SINE MIR 104 182 -80 1774 155 53 28 chr10 78043337 78043692 -62273073 - THE1B LTR MaLR 0 364 1 227 324 41 41 chr10 78043692 78043760 -62273005 + MIR SINE MIR 181 248 -14 1596 175 13 23 chr10 78044982 78045291 -62271474 - AluJo SINE Alu -6 306 1 2272 116 0 0 chr10 78045295 78045598 -62271167 - AluSx SINE Alu -7 305 3 471 295 0 0 chr10 78047931 78048053 -62268712 - L2 LINE L2 0 3313 3192 229 284 83 92 chr10 78048400 78048509 -62268256 + MER91B DNA MER1_type 23 130 -60 410 287 70 25 chr10 78048723 78048880 -62267885 + MIR SINE MIR 34 197 -65 2435 182 44 73 chr10 78050121 78050205 -62266560 - MER119 DNA MER1_type -4 579 494 315 0 0 0 chr10 78050205 78050240 -62266525 + (CA)n Simple_repeat Simple_repeat 2 36 0 2435 182 44 73 chr10 78050240 78050345 -62266420 - MER119 DNA MER1_type -89 494 388 2096 130 3 0 chr10 78050345 78050638 -62266127 + AluSx SINE Alu 1 294 -18 2435 182 44 73 chr10 78050638 78051039 -62265726 - MER119 DNA MER1_type -195 388 5 420 292 0 42 chr10 78053433 78053601 -62263164 - MER5A DNA MER1_type -3 186 26 198 245 19 0 chr10 78054966 78055019 -62261746 - L2 LINE L2 -12 3260 3207 372 212 93 17 chr10 78056081 78056199 -62260566 + MER103 DNA DNA 26 152 -14 192 97 0 0 chr10 78058059 78058090 -62258675 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 531 330 78 52 chr10 78058161 78058607 -62258158 - L3 LINE CR1 -125 1452 995 960 220 5 10 chr10 78058707 78058907 -62257858 + MER20 DNA MER1_type 1 199 -20 2157 131 0 3 chr10 78058907 78059204 -62257561 + AluSx SINE Alu 1 296 -16 501 205 186 13 chr10 78059481 78059637 -62257128 - MER5A DNA MER1_type 0 189 7 200 194 0 0 chr10 78060353 78060389 -62256376 + (TG)n Simple_repeat Simple_repeat 1 36 0 509 289 48 18 chr10 78060601 78060767 -62255998 + MIR SINE MIR 18 188 -74 1917 151 0 7 chr10 78061243 78061534 -62255231 - AluJb SINE Alu -23 289 1 2381 103 3 0 chr10 78061975 78062287 -62254478 - AluSq SINE Alu 0 313 1 286 306 31 59 chr10 78062315 78062340 -62254425 - MIR SINE MIR -62 146 122 369 0 0 0 chr10 78062340 78062381 -62254384 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1956 116 18 0 chr10 78062385 78062660 -62254105 - AluSq SINE Alu -31 282 3 286 306 31 59 chr10 78062660 78062780 -62253985 - MIR SINE MIR -89 119 28 829 265 171 41 chr10 78063051 78063537 -62253228 - MLT1H LTR MaLR 0 549 1 361 270 32 14 chr10 78064430 78064568 -62252197 + MIR3 SINE MIR 30 171 -37 725 124 0 47 chr10 78064582 78064711 -62252054 - AluJb SINE Alu -188 124 2 21 0 0 0 chr10 78064754 78064775 -62251990 + AT_rich Low_complexity Low_complexity 1 21 0 431 288 45 25 chr10 78064908 78065362 -62251403 + (TCCA)n Simple_repeat Simple_repeat 1 463 0 410 263 47 23 chr10 78065374 78065545 -62251220 + (TCCA)n Simple_repeat Simple_repeat 3 177 0 340 283 41 21 chr10 78065562 78065707 -62251058 + (TCCA)n Simple_repeat Simple_repeat 1 148 0 195 212 66 19 chr10 78065812 78065896 -62250869 - MIR SINE MIR -72 136 50 467 238 150 19 chr10 78067126 78067286 -62249479 + MER5A DNA MER1_type 9 189 0 474 352 109 29 chr10 78067467 78067842 -62248923 + L2 LINE L2 2868 3272 0 459 330 63 17 chr10 78068157 78068396 -62248369 - MIR SINE MIR -12 250 1 2237 113 0 0 chr10 78068952 78069244 -62247521 + AluSx SINE Alu 1 292 -20 942 241 64 19 chr10 78069726 78069991 -62246774 + MLT1E2 LTR MaLR 346 622 -4 2236 125 0 3 chr10 78070143 78070454 -62246311 + AluSq SINE Alu 2 311 -2 218 179 0 0 chr10 78071741 78071780 -62244985 + L2 LINE L2 3271 3309 -4 218 167 15 76 chr10 78071993 78072059 -62244706 + MIR3 SINE MIR 98 159 -49 279 0 0 0 chr10 78073507 78073538 -62243227 + (CA)n Simple_repeat Simple_repeat 2 32 0 303 295 0 0 chr10 78075499 78075577 -62241188 + MIR3 SINE MIR 125 202 -6 2765 29 6 0 chr10 78075601 78075914 -62240851 - AluYb8 SINE Alu -3 315 1 630 243 92 0 chr10 78076605 78076778 -62239987 - MER117 DNA MER1_type -2 195 7 834 292 91 27 chr10 78077226 78077342 -62239423 + L1ME3 LINE L1 5083 5190 -972 1801 179 3 10 chr10 78077342 78077649 -62239116 + AluJo SINE Alu 1 305 -7 834 292 91 27 chr10 78077649 78078218 -62238547 + L1ME3 LINE L1 5190 5826 -336 248 241 38 0 chr10 78078383 78078462 -62238303 + (TA)n Simple_repeat Simple_repeat 2 83 0 29073 31 2 2 chr10 78080327 78084548 -62232217 + L1PA3 LINE L1 1932 6153 -2 1444 217 38 12 chr10 78084731 78085072 -62231693 + MLT1A1 LTR MaLR 1 350 -15 1186 206 24 102 chr10 78085383 78085561 -62231204 - LTR37B LTR ERV1 -8 460 270 1969 158 3 0 chr10 78085561 78085859 -62230906 + AluJb SINE Alu 1 299 -13 1186 206 24 102 chr10 78085859 78086179 -62230586 - LTR37B LTR ERV1 -198 270 1 1014 150 75 90 chr10 78086338 78086395 -62230370 + MSTB1 LTR MaLR 1 57 -375 2059 107 0 32 chr10 78086395 78086703 -62230062 + AluSx SINE Alu 1 298 -14 1014 150 75 90 chr10 78086703 78086911 -62229854 + MSTB1 LTR MaLR 57 262 -170 1522 130 66 112 chr10 78086911 78086961 -62229804 - THE1C LTR MaLR 0 375 324 239 0 0 31 chr10 78086961 78086993 -62229772 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1522 130 66 112 chr10 78086993 78087005 -62229760 - THE1C LTR MaLR -51 324 313 3177 44 0 0 chr10 78087005 78087389 -62229376 - L1PA5 LINE L1 -8 6146 5763 1522 130 66 112 chr10 78087389 78087571 -62229194 - THE1C LTR MaLR -62 313 124 2189 106 0 0 chr10 78087571 78087853 -62228912 + AluSq SINE Alu 1 282 -31 195 69 0 0 chr10 78087857 78087886 -62228879 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1522 130 66 112 chr10 78087886 78088027 -62228738 - THE1C LTR MaLR -254 121 1 1093 128 11 0 chr10 78088027 78088200 -62228565 + MSTB1 LTR MaLR 258 432 0 2247 88 28 0 chr10 78089296 78089581 -62227184 - AluSc SINE Alu -15 294 2 3119 174 63 23 chr10 78089609 78090305 -62226460 - LTR8A LTR ERV1 -2 725 2 983 186 117 33 chr10 78090469 78090995 -62225770 - LTR48 LTR ERV1 -49 738 6 1451 153 150 0 chr10 78091090 78091403 -62225362 - MER50 LTR ERV1 -374 360 1 198 167 0 0 chr10 78092412 78092448 -62224317 + A-rich Low_complexity Low_complexity 1 36 0 538 223 103 58 chr10 78093542 78093766 -62222999 - LTR48 LTR ERV1 0 787 554 2980 174 18 21 chr10 78093808 78094434 -62222331 - LTR27 LTR ERV1 0 636 13 14842 121 21 3 chr10 78094441 78094976 -62221789 - Tigger1 DNA MER2_type -32 2386 1862 212 0 36 0 chr10 78094976 78095004 -62221761 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 14842 121 21 3 chr10 78095004 78096789 -62219976 - Tigger1 DNA MER2_type -556 1862 24 285 219 142 55 chr10 78096804 78096958 -62219807 - LTR48 LTR ERV1 -293 367 189 283 245 29 20 chr10 78096980 78097082 -62219683 - LTR48 LTR ERV1 -306 481 379 705 180 161 0 chr10 78097105 78097266 -62219499 - MER34C LTR ERV1 -352 233 47 364 252 48 10 chr10 78097324 78097427 -62219338 - MIR SINE MIR -119 143 37 3359 109 7 72 chr10 78097444 78098012 -62218753 + LTR26B LTR ERV1 1 531 0 1054 226 53 18 chr10 78098012 78098349 -62218416 - Charlie4a DNA MER1_type -51 457 109 708 183 0 15 chr10 78098349 78098486 -62218279 + FRAM SINE Alu 42 176 0 327 209 47 12 chr10 78098658 78098744 -62218021 - MIR SINE MIR -67 141 53 2315 112 3 0 chr10 78099056 78099361 -62217404 - AluSx SINE Alu -6 306 1 312 297 71 6 chr10 78099545 78099715 -62217050 - MIR SINE MIR -62 146 5 183 156 0 0 chr10 78100010 78100042 -62216723 - MIR SINE MIR -1 261 230 345 229 63 135 chr10 78100533 78101075 -62215690 - L1MC5 LINE L1 -199 7762 7260 490 118 5 215 chr10 78101115 78101301 -62215464 + L1MA9 LINE L1 6165 6311 -1 819 101 32 6 chr10 78101309 78101447 -62215318 + L1P5 LINE L1 5293 5437 -714 352 55 36 0 chr10 78101447 78101502 -62215263 + (CA)n Simple_repeat Simple_repeat 1 57 0 1018 61 0 0 chr10 78101502 78101633 -62215132 + L1PB1 LINE L1 5793 5923 -228 252 122 73 0 chr10 78101664 78101746 -62215019 + (TA)n Simple_repeat Simple_repeat 2 89 0 2078 78 10 0 chr10 78101748 78102043 -62214722 + L1P5 LINE L1 5492 5789 -362 255 219 0 27 chr10 78102036 78102109 -62214656 + L1MC4 LINE L1 6628 6698 -1344 * 2611 77 3 0 chr10 78102131 78102499 -62214266 + L1PB1 LINE L1 5782 6150 -1 275 282 42 7 chr10 78102579 78102721 -62214044 - L1MC4 LINE L1 -786 7256 7110 555 283 53 16 chr10 78103042 78103229 -62213536 + MIR SINE MIR 69 262 0 2189 115 0 0 chr10 78103242 78103528 -62213237 - 7SLRNA srpRNA srpRNA -11 309 24 1941 189 23 54 chr10 78103535 78104017 -62212748 - MLT1C LTR MaLR 0 467 1 521 253 60 34 chr10 78105023 78105256 -62211509 + MLT1D LTR MaLR 3 241 -264 337 226 0 12 chr10 78105263 78105347 -62211418 + MLT1D LTR MaLR 385 467 0 357 292 132 18 chr10 78105347 78105514 -62211251 + MIR SINE MIR 62 246 -16 472 312 135 6 chr10 78106113 78106283 -62210482 + MIR3 SINE MIR 14 205 -3 440 315 56 7 chr10 78106807 78106979 -62209786 - MIR SINE MIR -61 147 3 311 295 175 40 chr10 78107193 78107393 -62209372 - MIR SINE MIR -2 260 34 601 256 76 87 chr10 78108799 78109143 -62207622 + MLT1H LTR MaLR 1 340 -209 1097 218 5 9 chr10 78109335 78109555 -62207210 + MER20 DNA MER1_type 1 219 0 2049 118 7 11 chr10 78111022 78111335 -62205430 - AluSq SINE Alu 0 312 1 2878 10 0 0 chr10 78112453 78112766 -62203999 - AluYb8 SINE Alu -5 313 1 231 319 69 69 chr10 78114265 78114425 -62202340 - L3 LINE CR1 -643 934 775 451 290 195 17 chr10 78114444 78114675 -62202090 - L3 LINE CR1 -932 645 374 367 104 15 15 chr10 78114690 78114757 -62202008 + (GA)n Simple_repeat Simple_repeat 2 68 0 855 149 0 0 chr10 78115496 78115650 -62201115 + (CTATA)n Simple_repeat Simple_repeat 4 157 0 289 343 28 28 chr10 78116090 78116268 -62200497 + L2 LINE L2 2716 2893 -421 2694 220 64 24 chr10 78117682 78118542 -62198223 + MER97a DNA MER1_type 1 894 0 2506 94 0 0 chr10 78118546 78118855 -62197910 - AluSq SINE Alu -4 309 1 304 272 49 0 chr10 78118937 78119047 -62197718 - MLT1H LTR MaLR -2 547 426 641 262 56 49 chr10 78119094 78119418 -62197347 - MLT1H LTR MaLR -222 327 2 5702 128 4 8 chr10 78119541 78120522 -62196243 - L1MA5A LINE L1 -2 6295 5319 3402 186 14 34 chr10 78120525 78122020 -62194745 - L1 LINE L1 -3235 3613 2147 552 194 29 0 chr10 78122021 78122124 -62194641 - U6 snRNA snRNA 0 107 2 440 316 119 31 chr10 78122142 78122277 -62194488 - MLT1K LTR MaLR -232 356 234 2510 63 0 25 chr10 78122277 78122596 -62194169 - AluY SINE Alu 0 311 1 440 316 119 31 chr10 78122596 78122780 -62193985 - MLT1K LTR MaLR -354 234 9 1150 228 47 28 chr10 78123198 78123452 -62193313 + AluJo SINE Alu 24 282 -30 275 303 144 23 chr10 78123652 78123784 -62192981 + MIR3 SINE MIR 22 169 -39 316 280 97 0 chr10 78124804 78124897 -62191868 + L2 LINE L2 3146 3247 -25 2142 135 0 25 chr10 78125341 78125659 -62191106 + AluSx SINE Alu 1 310 -2 821 284 51 4 chr10 78127173 78127409 -62189356 + MIR SINE MIR 6 252 -10 479 301 142 9 chr10 78127655 78127881 -62188884 - MIR SINE MIR -5 257 2 301 244 0 0 chr10 78128413 78128499 -62188266 - L1MB8 LINE L1 0 6178 6093 1522 173 59 19 chr10 78128516 78128887 -62187878 - L1MB4 LINE L1 -6 6174 5789 347 230 105 39 chr10 78129350 78129377 -62187388 + MIR3 SINE MIR 3 27 -181 192 40 0 0 chr10 78129377 78129402 -62187363 + (CCCTAA)n Simple_repeat Simple_repeat 4 28 0 347 230 105 39 chr10 78129402 78129526 -62187239 + MIR3 SINE MIR 27 166 -42 554 288 94 0 chr10 78130892 78131083 -62185682 - MIR SINE MIR 0 262 54 899 309 66 36 chr10 78131243 78131712 -62185053 - L2 LINE L2 -16 3297 2815 1913 164 0 0 chr10 78132338 78132624 -62184141 + AluJb SINE Alu 11 296 -16 1984 121 69 39 chr10 78133865 78134229 -62182536 - THE1C LTR MaLR 0 375 1 1316 256 112 21 chr10 78135975 78136646 -62180119 - HAL1b LINE L1 -425 923 192 24 32 0 0 chr10 78136698 78136729 -62180036 + AT_rich Low_complexity Low_complexity 1 31 0 572 241 81 26 chr10 78136847 78137209 -62179556 - L1ME LINE L1 -4808 1272 894 396 0 0 0 chr10 78137209 78137253 -62179512 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 350 138 25 0 chr10 78137253 78137333 -62179432 + CT-rich Low_complexity Low_complexity 4 85 0 1595 193 13 16 chr10 78137336 78137642 -62179123 - AluJo SINE Alu -7 305 1 472 298 69 13 chr10 78137645 78138068 -62178697 - L1ME LINE L1 -5169 901 465 357 284 14 50 chr10 78138175 78138316 -62178449 - L1ME LINE L1 -5616 454 319 322 323 83 32 chr10 78138409 78138626 -62178139 - L1ME LINE L1 -5835 235 8 615 191 284 0 chr10 78140373 78140567 -62176198 + MIR SINE MIR 13 261 -1 2009 69 0 4 chr10 78140735 78140980 -62175785 - AluSq SINE Alu -5 308 65 651 276 122 0 chr10 78140982 78141163 -62175602 - MIR SINE MIR -19 243 41 193 275 87 43 chr10 78142020 78142089 -62174676 - L2 LINE L2 -44 3269 3198 402 296 67 7 chr10 78142156 78142291 -62174474 - L3 LINE CR1 -3 1574 1432 618 267 60 24 chr10 78144774 78145025 -62171740 - MIR SINE MIR -1 261 2 719 178 0 31 chr10 78145026 78145155 -62171610 - FLAM_A SINE Alu -10 132 8 1846 214 112 7 chr10 78145309 78145763 -62171002 + MLT1D LTR MaLR 1 502 -3 2621 105 6 3 chr10 78145856 78146219 -62170546 + THE1B LTR MaLR 1 364 0 465 301 55 0 chr10 78146229 78146375 -62170390 + L2 LINE L2 3159 3312 -1 23 0 0 0 chr10 78146623 78146646 -62170119 + AT_rich Low_complexity Low_complexity 1 23 0 431 239 43 43 chr10 78147492 78147630 -62169135 + MIR3 SINE MIR 15 152 -56 28 61 0 0 chr10 78148736 78148785 -62167980 + AT_rich Low_complexity Low_complexity 1 49 0 438 206 71 0 chr10 78149201 78149342 -62167423 - LTR54B LTR ERV1 -2 496 346 2111 93 26 6 chr10 78149342 78149655 -62167110 + L1P4 LINE L1 5494 5812 -353 768 142 7 0 chr10 78149634 78149775 -62166990 + L1P LINE L1 5050 5191 -955 * 696 55 0 0 chr10 78149775 78149866 -62166899 - LTR54B LTR ERV1 -407 91 1 196 400 9 0 chr10 78150766 78150876 -62165889 + L3 LINE CR1 1432 1542 -35 2177 125 3 13 chr10 78151604 78151917 -62164848 - AluSx SINE Alu 0 312 3 336 127 0 0 chr10 78153097 78153152 -62163613 + (CA)n Simple_repeat Simple_repeat 2 56 0 286 356 11 42 chr10 78153436 78153629 -62163136 - MIR3 SINE MIR -67 141 4 1710 171 0 39 chr10 78154173 78154478 -62162287 - AluSx SINE Alu -19 293 1 195 296 155 0 chr10 78154487 78154558 -62162207 + MIR SINE MIR 69 150 -58 937 348 112 25 chr10 78155703 78156550 -62160215 + L3 LINE CR1 618 1538 -39 278 315 27 27 chr10 78158138 78158249 -62158516 - MIR3 SINE MIR -84 124 14 191 377 91 0 chr10 78159803 78159880 -62156885 - L2 LINE L2 -210 3062 2979 279 0 0 0 chr10 78160354 78160385 -62156380 + (TG)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 78162305 78162329 -62154436 + AT_rich Low_complexity Low_complexity 1 24 0 200 304 0 0 chr10 78166572 78166618 -62150147 + polypyrimidine Low_complexity Low_complexity 1 46 0 433 303 88 23 chr10 78168695 78169127 -62147638 + MLT1K LTR MaLR 77 572 -16 770 275 8 65 chr10 78174237 78174499 -62142266 + MIR SINE MIR 2 248 -14 211 239 45 15 chr10 78174547 78174614 -62142151 - MIR SINE MIR -106 156 88 1782 230 95 66 chr10 78174821 78175423 -62141342 + MER63D DNA MER1_type 2 648 -413 751 201 0 8 chr10 78175423 78175557 -62141208 - FLAM_C SINE Alu 0 133 1 1782 230 95 66 chr10 78175557 78175984 -62140781 + MER63D DNA MER1_type 648 1061 0 406 290 26 26 chr10 78176225 78176380 -62140385 + MIR SINE MIR 6 160 -102 3862 173 94 12 chr10 78176381 78177793 -62138972 + MER52A LTR ERV1 1 1755 0 187 345 0 0 chr10 78177793 78177848 -62138917 + MIR SINE MIR 158 212 -50 347 315 20 20 chr10 78178304 78178453 -62138312 + MIR SINE MIR 20 168 -94 2069 143 0 0 chr10 78178769 78179056 -62137709 - AluSx SINE Alu -25 287 1 222 222 0 0 chr10 78179328 78179373 -62137392 + MIR3 SINE MIR 155 199 -9 273 268 0 14 chr10 78179415 78179486 -62137279 + CT-rich Low_complexity Low_complexity 1 70 0 2346 90 0 0 chr10 78180092 78180391 -62136374 - AluY SINE Alu -12 299 1 292 237 0 0 chr10 78180767 78180826 -62135939 + L2 LINE L2 3255 3313 0 734 314 54 26 chr10 78182117 78182735 -62134030 - L1ME3 LINE L1 -328 5834 5284 2052 130 0 0 chr10 78182846 78183130 -62133635 + AluSx SINE Alu 1 284 -28 2386 94 0 3 chr10 78188276 78188575 -62128190 - AluSg SINE Alu -12 298 1 323 340 177 9 chr10 78188601 78188833 -62127932 + L2 LINE L2 2997 3267 -5 206 265 36 36 chr10 78189559 78189642 -62127123 - MIR SINE MIR -61 201 119 21 36 0 0 chr10 78191028 78191056 -62125709 + AT_rich Low_complexity Low_complexity 1 28 0 1873 177 139 16 chr10 78191332 78191925 -62124840 - MER39 LTR ERV1 0 707 6 2155 133 0 0 chr10 78192173 78192481 -62124284 + AluSx SINE Alu 1 308 -4 187 365 91 29 chr10 78195976 78196217 -62120548 - L2 LINE L2 -2 3270 3015 4082 92 10 26 chr10 78196622 78197242 -62119523 - MER4B LTR ERV1 0 610 1 1470 267 83 15 chr10 78198340 78198839 -62117926 - L2 LINE L2 0 3313 2773 1836 167 97 3 chr10 78198839 78199180 -62117585 - MER93b LTR ERV1 0 373 1 1470 267 83 15 chr10 78199180 78199217 -62117548 - L2 LINE L2 -540 2773 2740 625 267 40 0 chr10 78199397 78199592 -62117173 + FAM SINE Alu 1 66 0 403 313 87 50 chr10 78199830 78200232 -62116533 + L1M4 LINE L1 2141 2557 -3589 452 282 72 88 chr10 78201176 78201424 -62115341 + L1M4 LINE L1 3682 3920 -2226 1995 164 0 0 chr10 78201424 78201728 -62115037 + AluSx SINE Alu 1 304 -8 452 282 72 88 chr10 78201728 78201954 -62114811 + L1M4 LINE L1 3920 4148 -1998 439 232 0 0 chr10 78202032 78202127 -62114638 - MER58B DNA MER1_type 0 341 247 643 299 108 40 chr10 78202199 78202697 -62114068 + L1M4 LINE L1 2182 2713 -3433 1094 247 126 70 chr10 78202701 78203255 -62113510 - MLT1G1 LTR MaLR 0 595 11 978 319 89 35 chr10 78203474 78204122 -62112643 + L1M4 LINE L1 2895 3577 -2569 705 265 9 43 chr10 78204125 78204336 -62112429 + MER63A DNA MER1_type 4 207 -3 227 303 66 22 chr10 78204496 78204770 -62111995 + L1M4 LINE L1 3670 3955 -2191 250 308 45 8 chr10 78204840 78204973 -62111792 + L1M4 LINE L1 4048 4185 -1961 2203 127 0 13 chr10 78205004 78205312 -62111453 - AluSx SINE Alu -8 304 1 764 330 61 49 chr10 78205330 78206102 -62110663 + L1M4 LINE L1 4246 5026 -1120 521 180 8 119 chr10 78207239 78207483 -62109282 - AluSg/x SINE Alu -10 302 86 8027 54 0 0 chr10 78207658 78208730 -62108035 + L1P LINE L1 1182 2253 -3893 629 297 89 35 chr10 78208851 78209319 -62107446 - L2 LINE L2 -253 3060 2566 222 163 20 41 chr10 78210132 78210181 -62106584 + MIR SINE MIR 215 262 0 297 309 60 47 chr10 78210449 78210598 -62106167 + MIR SINE MIR 45 195 -67 250 296 25 0 chr10 78211478 78211559 -62105206 + MER5B DNA MER1_type 1 83 -95 477 262 48 35 chr10 78211562 78211707 -62105058 + MER5B DNA MER1_type 6 152 -26 228 291 36 0 chr10 78211720 78211775 -62104990 + MER5A DNA MER1_type 83 139 -50 279 157 0 0 chr10 78214461 78214512 -62102253 + (CA)n Simple_repeat Simple_repeat 2 52 0 457 259 165 71 chr10 78215917 78216268 -62100497 + MLT1J LTR MaLR 110 493 -18 223 348 22 45 chr10 78216560 78216649 -62100116 + MIR SINE MIR 19 105 -103 327 236 74 108 chr10 78216741 78216889 -62099876 - MIR SINE MIR -2 260 118 11431 41 2 7 chr10 78217216 78218725 -62098040 - L1P LINE L1 -948 5198 3698 1805 233 120 34 chr10 78218946 78219538 -62097227 + Charlie2b DNA MER1_type 51 693 -2089 324 225 11 0 chr10 78219597 78219686 -62097079 + L1ME3 LINE L1 6067 6156 -6 251 345 24 51 chr10 78220258 78220551 -62096214 - L1MEd LINE L1 -5560 559 275 1711 143 4 23 chr10 78221320 78221418 -62095347 + AluJb SINE Alu 38 136 -176 315 0 0 0 chr10 78221418 78221453 -62095312 + (TA)n Simple_repeat Simple_repeat 1 35 0 1711 143 4 23 chr10 78221453 78221619 -62095146 + AluJb SINE Alu 136 297 -15 529 284 128 23 chr10 78221651 78221957 -62094808 - MER46C DNA MER2_type 0 338 1 537 92 0 0 chr10 78222457 78222533 -62094232 + (AATAG)n Simple_repeat Simple_repeat 5 80 0 1235 128 11 11 chr10 78222645 78222824 -62093941 - AluSx SINE Alu -131 181 3 201 178 0 0 chr10 78222924 78222969 -62093796 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 231 112 52 chr10 78223245 78223367 -62093398 + MIR SINE MIR 23 152 -56 249 292 115 21 chr10 78223401 78223497 -62093268 + MIR SINE MIR 136 240 -22 391 267 156 0 chr10 78224399 78224534 -62092231 + MER5B DNA MER1_type 4 159 -19 598 237 32 32 chr10 78224547 78224733 -62092032 - MER5A DNA MER1_type -3 186 1 216 0 0 0 chr10 78225244 78225268 -62091497 + (A)n Simple_repeat Simple_repeat 1 24 0 2319 82 26 0 chr10 78225578 78225883 -62090882 + AluSq SINE Alu 1 313 0 402 275 22 36 chr10 78226439 78226577 -62090188 + MIR SINE MIR 22 157 -105 7369 125 18 6 chr10 78226577 78228142 -62088623 + L1M1 LINE L1 4039 5628 -677 1154 132 6 0 chr10 78228261 78228428 -62088337 + AluSc SINE Alu 134 301 -8 2444 74 0 13 chr10 78228499 78228810 -62087955 + AluY SINE Alu 1 307 -4 1429 212 79 119 chr10 78228866 78229789 -62086976 + L1M4 LINE L1 4280 5165 -981 7791 167 14 29 chr10 78229790 78231396 -62085369 + L1 LINE L1 3259 4839 -1307 3057 78 57 5 chr10 78231396 78231833 -62084932 - L1PA10 LINE L1 -1 6167 5708 7791 167 14 29 chr10 78231833 78231967 -62084798 + L1 LINE L1 4839 4973 -1173 849 88 24 24 chr10 78231967 78232092 -62084673 - AluSg/x SINE Alu -20 290 166 1657 212 92 7 chr10 78232215 78232672 -62084093 + L1MC4a LINE L1 7191 7686 -122 * 4847 187 27 32 chr10 78232661 78233407 -62083358 - L1 LINE L1 -2755 3573 2825 1569 105 0 0 chr10 78233407 78233644 -62083121 - AluSq SINE Alu 0 322 86 4847 187 27 32 chr10 78233644 78233682 -62083083 - L1 LINE L1 -3503 2825 2788 2322 102 3 10 chr10 78233682 78233995 -62082770 - AluSx SINE Alu -1 311 1 4847 187 27 32 chr10 78233995 78234425 -62082340 - L1 LINE L1 -3540 2788 2363 993 143 99 0 chr10 78234449 78234631 -62082134 - MER30 DNA MER1_type -30 200 1 2199 175 20 5 chr10 78234636 78235030 -62081735 - MSTB LTR MaLR -26 400 1 309 200 57 0 chr10 78235030 78235100 -62081665 - L1 LINE L1 -3954 2374 2301 714 163 27 0 chr10 78235113 78235260 -62081505 - L1 LINE L1 -4442 886 736 1469 127 45 52 chr10 78235264 78235555 -62081210 - L1 LINE L1 -4629 699 411 * 2053 125 64 6 chr10 78235552 78235703 -62081062 - L1M2 LINE L1 -655 5642 5501 225 0 0 0 chr10 78235703 78235728 -62081037 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2053 125 64 6 chr10 78235728 78236071 -62080694 - L1M2 LINE L1 -796 5501 5122 488 247 65 11 chr10 78236145 78236331 -62080434 - L1 LINE L1 -985 5161 4966 1206 88 0 0 chr10 78236333 78236480 -62080285 + AluSg SINE Alu 1 147 -163 2149 115 16 0 chr10 78236643 78236947 -62079818 - AluSx SINE Alu -3 309 1 268 267 114 9 chr10 78236988 78237093 -62079672 + L2 LINE L2 3182 3297 -16 326 23 23 0 chr10 78237229 78237272 -62079493 + (TG)n Simple_repeat Simple_repeat 1 44 0 1986 143 0 17 chr10 78237879 78238180 -62078585 + AluSx SINE Alu 1 296 -16 208 231 0 0 chr10 78238286 78238325 -62078440 + (CACCAT)n Simple_repeat Simple_repeat 6 44 0 370 291 126 25 chr10 78238362 78238561 -62078204 - MIR SINE MIR -36 226 8 197 246 56 93 chr10 78238525 78238663 -62078102 + MIR SINE MIR 81 212 -50 * 1925 67 0 0 chr10 78240200 78240440 -62076325 + L1PA7 LINE L1 5908 6147 -7 442 264 68 34 chr10 78241405 78241640 -62075125 + L3 LINE CR1 1156 1398 -179 214 191 0 21 chr10 78241676 78241723 -62075042 + (CAT)n Simple_repeat Simple_repeat 3 48 0 378 231 108 0 chr10 78242423 78242553 -62074212 + L1MB2 LINE L1 5992 6135 -36 1218 247 62 60 chr10 78242650 78242939 -62073826 + L1MC4a LINE L1 5522 5809 -1999 270 0 0 0 chr10 78242939 78242969 -62073796 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 375 23 0 0 chr10 78242968 78243012 -62073753 + (TG)n Simple_repeat Simple_repeat 1 44 0 1218 247 62 60 chr10 78242969 78243272 -62073493 + L1MC4a LINE L1 5809 6072 -1736 22 35 0 0 chr10 78243301 78243330 -62073435 + AT_rich Low_complexity Low_complexity 1 29 0 211 143 24 0 chr10 78243420 78243462 -62073303 + (TAA)n Simple_repeat Simple_repeat 1 43 0 443 330 64 17 chr10 78243495 78243731 -62073034 - MIR SINE MIR -12 250 4 3232 251 35 23 chr10 78243930 78244709 -62072056 - L1M4 LINE L1 -2106 4040 3272 1706 138 16 0 chr10 78244709 78244963 -62071802 - AluSx SINE Alu -6 306 49 3232 251 35 23 chr10 78244963 78245098 -62071667 - L1M4 LINE L1 -2874 3272 3140 1498 142 146 62 chr10 78245098 78245386 -62071379 - AluSx SINE Alu 0 312 1 3232 251 35 23 chr10 78245386 78245560 -62071205 - L1M4 LINE L1 -3006 3140 2938 342 220 77 0 chr10 78245581 78245672 -62071093 - MER58C DNA MER1_type -19 196 99 317 244 23 12 chr10 78245713 78245799 -62070966 - MER58C DNA MER1_type -90 125 39 231 36 0 0 chr10 78245911 78245939 -62070826 + (CA)n Simple_repeat Simple_repeat 1 28 0 372 59 0 0 chr10 78246273 78246324 -62070441 + (TG)n Simple_repeat Simple_repeat 2 52 0 223 313 35 56 chr10 78246324 78246468 -62070297 - MIR SINE MIR -74 188 48 2281 114 3 0 chr10 78246785 78247084 -62069681 - AluSq SINE Alu -13 300 1 997 153 0 0 chr10 78247830 78247974 -62068791 + FRAM SINE Alu 16 159 -17 539 266 111 15 chr10 78248131 78248330 -62068435 - MIR SINE MIR 0 262 45 459 266 0 0 chr10 78248372 78248481 -62068284 - LTR67 LTR ERVL -2 555 447 246 308 195 19 chr10 78248538 78248697 -62068068 + MLT1J1 LTR MaLR 12 198 -248 429 316 44 53 chr10 78248894 78249122 -62067643 - LTR67 LTR ERVL -107 450 225 2099 99 14 0 chr10 78249885 78250169 -62066596 - AluSc SINE Alu -1 308 21 551 225 42 7 chr10 78250382 78250524 -62066241 + L1MC4a LINE L1 5717 5863 -1945 1615 147 62 37 chr10 78250526 78250900 -62065865 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2100 92 3 83 chr10 78250920 78251257 -62065508 + AluSx SINE Alu 3 312 0 366 287 33 0 chr10 78252860 78252982 -62063783 + MIR SINE MIR 58 183 -79 297 296 19 56 chr10 78253142 78253304 -62063461 - L2 LINE L2 -35 3237 3082 385 288 116 52 chr10 78253493 78254456 -62062309 + L1MC4a LINE L1 4100 5124 -1022 22 0 0 0 chr10 78254604 78254626 -62062139 + AT_rich Low_complexity Low_complexity 1 22 0 573 252 8 0 chr10 78254762 78254881 -62061884 - MLT1J2 LTR MaLR -266 184 65 619 305 68 68 chr10 78255016 78255590 -62061175 + L1MC4a LINE L1 5291 5864 -1944 697 219 39 61 chr10 78256216 78256343 -62060422 + L1MC5 LINE L1 7659 7787 -174 2067 127 10 3 chr10 78256343 78256634 -62060131 + AluSq SINE Alu 1 293 -20 697 219 39 61 chr10 78256634 78256785 -62059980 + L1MC5 LINE L1 7787 7931 -30 252 86 0 0 chr10 78257171 78257206 -62059559 + (TCC)n Simple_repeat Simple_repeat 3 37 0 2281 120 128 13 chr10 78257596 78257980 -62058785 + MSTA LTR MaLR 1 428 0 730 207 0 30 chr10 78258161 78258244 -62058521 - MER69 DNA AcHobo -374 2152 2075 3997 142 24 2 chr10 78258244 78258865 -62057900 + MER41B LTR ERV1 1 635 0 730 207 0 30 chr10 78258865 78258950 -62057815 - MER69 DNA AcHobo -451 2075 1989 227 62 0 0 chr10 78258950 78258982 -62057783 - L1MB7 LINE L1 -59 6125 6094 1911 104 4 11 chr10 78259611 78259871 -62056894 + AluSq SINE Alu 1 258 -55 2197 98 3 3 chr10 78260219 78260506 -62056259 + AluSq SINE Alu 1 287 -26 264 293 37 0 chr10 78260868 78260950 -62055815 + MIR SINE MIR 81 165 -97 723 225 96 0 chr10 78261035 78261222 -62055543 - MIR SINE MIR -8 254 50 1843 135 0 4 chr10 78261535 78261802 -62054963 - AluSx SINE Alu -8 304 39 1984 89 107 4 chr10 78262306 78262586 -62054179 + AluSg1 SINE Alu 1 309 0 244 235 92 42 chr10 78262586 78262705 -62054060 + L1MEd LINE L1 815 939 -5266 1782 129 161 75 chr10 78262773 78263145 -62053620 - MER4A LTR ERV1 0 664 261 556 176 20 10 chr10 78263142 78263244 -62053521 - MER4A LTR ERV1 -561 103 1 * 329 200 14 0 chr10 78263328 78263398 -62053367 - L1MB8 LINE L1 -1 6177 6107 359 249 63 118 chr10 78263898 78263970 -62052795 + L1MEd LINE L1 1262 1336 -5060 2260 113 3 0 chr10 78263970 78264271 -62052494 + AluSg SINE Alu 1 302 -8 359 249 63 118 chr10 78264271 78264513 -62052252 + L1MEd LINE L1 1336 1590 -4806 4359 82 39 8 chr10 78264513 78265100 -62051665 - LTR14B LTR ERVK 0 608 4 359 249 63 118 chr10 78265100 78265118 -62051647 + L1MEd LINE L1 1590 1607 -4789 2068 165 81 8 chr10 78265118 78265512 -62051253 + MSTA LTR MaLR 3 425 -3 9771 157 27 6 chr10 78265515 78267132 -62049633 + MSTA-int LTR MaLR 1 1651 0 2005 144 79 53 chr10 78267132 78267309 -62049456 + MSTA LTR MaLR 1 172 -256 2314 86 10 0 chr10 78267309 78267600 -62049165 + AluSq SINE Alu 1 294 -19 2005 144 79 53 chr10 78267600 78267839 -62048926 + MSTA LTR MaLR 172 428 0 359 249 63 118 chr10 78267839 78267957 -62048808 + L1MEd LINE L1 1607 1694 -4702 284 229 12 0 chr10 78267991 78268074 -62048691 + (TA)n Simple_repeat Simple_repeat 2 85 0 231 286 23 15 chr10 78268085 78268218 -62048547 + (CATA)n Simple_repeat Simple_repeat 3 136 0 * 289 219 42 0 chr10 78268123 78268219 -62048546 + (TA)n Simple_repeat Simple_repeat 2 101 0 646 251 93 47 chr10 78268302 78268354 -62048411 - L1MEc LINE L1 -4594 1802 1754 2295 156 41 17 chr10 78268354 78268772 -62047993 - MSTA LTR MaLR 0 428 1 646 251 93 47 chr10 78268772 78269126 -62047639 - L1MEc LINE L1 -4642 1754 1377 641 182 96 53 chr10 78269833 78269995 -62046770 + MIR SINE MIR 44 216 -46 2525 133 26 19 chr10 78269995 78270424 -62046341 - MSTB1 LTR MaLR 0 432 1 641 182 96 53 chr10 78270424 78270448 -62046317 + MIR SINE MIR 216 238 -24 291 239 65 0 chr10 78271187 78271279 -62045486 + MIR3 SINE MIR 104 201 -7 437 307 16 0 chr10 78271690 78271817 -62044948 + L3 LINE CR1 942 1070 -507 280 309 11 0 chr10 78271847 78271941 -62044824 + L2 LINE L2 3161 3255 -17 229 309 118 27 chr10 78272001 78272111 -62044654 + L3 LINE CR1 1169 1288 -289 330 292 35 0 chr10 78272140 78272253 -62044512 + L3 LINE CR1 1375 1491 -86 633 188 101 7 chr10 78272494 78272632 -62044133 + MER5A DNA MER1_type 3 153 -36 189 204 0 41 chr10 78272983 78273032 -62043733 + L3 LINE CR1 1509 1555 -22 192 77 0 0 chr10 78273042 78273068 -62043697 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 2592 58 0 0 chr10 78274340 78274650 -62042115 - AluY SINE Alu -1 310 1 333 270 36 0 chr10 78274703 78274814 -62041951 + MIR SINE MIR 57 171 -91 657 309 8 12 chr10 78274818 78275061 -62041704 + MIR SINE MIR 4 245 -17 195 100 0 0 chr10 78276423 78276453 -62040312 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 262 330 174 4 chr10 78276471 78276701 -62040064 - L2 LINE L2 -38 3234 2966 183 236 124 22 chr10 78277908 78277997 -62038768 + MIR3 SINE MIR 82 179 -29 1816 173 16 10 chr10 78278229 78278535 -62038230 + AluJo SINE Alu 5 312 0 236 244 79 79 chr10 78278877 78278906 -62037859 - MIR SINE MIR 0 262 234 2157 121 50 19 chr10 78278906 78279269 -62037496 + THE1C LTR MaLR 1 374 -1 236 244 79 79 chr10 78279269 78279366 -62037399 - MIR SINE MIR -27 235 136 4798 118 36 17 chr10 78279392 78280219 -62036546 - L1MA2 LINE L1 -2 6302 5460 2361 151 3 0 chr10 78280653 78281003 -62035762 - MLT1A1 LTR MaLR -12 353 3 280 280 110 38 chr10 78281085 78281262 -62035503 + MIR SINE MIR 19 206 -56 1604 161 142 20 chr10 78281344 78281697 -62035068 - MSTD LTR MaLR 0 396 1 297 229 275 15 chr10 78281697 78281828 -62034937 - MLT1K LTR MaLR -50 538 374 190 286 143 10 chr10 78282090 78282188 -62034577 - MIR SINE MIR -79 129 19 267 289 126 7 chr10 78282469 78282604 -62034161 + MLT1J LTR MaLR 3 153 -358 638 275 21 21 chr10 78282654 78282847 -62033918 + MLT1J LTR MaLR 267 459 -52 3995 209 73 46 chr10 78282851 78283000 -62033765 - Charlie2a DNA MER1_type -45 2817 2673 2101 123 3 3 chr10 78283000 78283292 -62033473 + AluJb SINE Alu 1 292 -20 3995 209 73 46 chr10 78283292 78283364 -62033401 - Charlie2a DNA MER1_type -189 2673 2604 2452 84 0 3 chr10 78283364 78283673 -62033092 + AluSc SINE Alu 1 308 -1 3995 209 73 46 chr10 78283673 78284711 -62032054 - Charlie2a DNA MER1_type -258 2604 1523 1741 51 0 0 chr10 78284817 78285031 -62031734 - L1PA4 LINE L1 -3 6152 5939 1117 232 143 63 chr10 78285190 78286053 -62030712 - L1ME3A LINE L1 -208 5962 5036 291 264 42 0 chr10 78286264 78286336 -62030429 - L1MC5 LINE L1 -56 7905 7831 246 176 0 0 chr10 78286401 78286452 -62030313 + CT-rich Low_complexity Low_complexity 2 52 0 599 195 39 16 chr10 78286542 78286670 -62030095 + FLAM_A SINE Alu 12 142 0 2085 145 0 7 chr10 78286725 78287021 -62029744 + AluSx SINE Alu 1 294 -18 343 162 0 54 chr10 78287040 78287114 -62029651 - MIR SINE MIR -111 151 82 326 336 32 0 chr10 78287204 78287329 -62029436 - MIR3 SINE MIR -29 179 51 2190 125 0 3 chr10 78287676 78287973 -62028792 + AluSx SINE Alu 1 296 -16 505 269 154 23 chr10 78287978 78288492 -62028273 + L1MEd LINE L1 1252 1866 -4516 2236 100 6 34 chr10 78288819 78289140 -62027625 + AluSp SINE Alu 1 312 -1 283 235 162 13 chr10 78289247 78289426 -62027339 + L1MEd LINE L1 2383 2598 -3784 250 289 125 39 chr10 78289826 78289930 -62026835 - MLT1K LTR MaLR -347 241 129 25 0 0 0 chr10 78289934 78289959 -62026806 + AT_rich Low_complexity Low_complexity 1 25 0 346 264 83 8 chr10 78290019 78290140 -62026625 - MIR SINE MIR -86 176 47 278 284 171 70 chr10 78290880 78291225 -62025540 - L2 LINE L2 -3 3269 2890 836 149 38 115 chr10 78291244 78291317 -62025448 + MER20 DNA MER1_type 1 78 -141 4755 136 27 13 chr10 78291317 78292089 -62024676 - LTR39 LTR ERV1 0 783 1 836 149 38 115 chr10 78292089 78292250 -62024515 + MER20 DNA MER1_type 78 217 -2 1877 145 90 32 chr10 78292509 78292570 -62024195 + MLT1A1 LTR MaLR 1 57 -308 5736 67 21 3 chr10 78292570 78293322 -62023443 - MER4E LTR ERV1 0 766 1 1877 145 90 32 chr10 78293322 78293605 -62023160 + MLT1A1 LTR MaLR 57 365 0 1822 135 0 33 chr10 78293639 78293942 -62022823 - MER4A LTR ERV1 0 664 372 2171 159 57 26 chr10 78293970 78294528 -62022237 - LTR10E LTR ERV1 0 633 1 614 93 31 21 chr10 78294554 78294651 -62022114 - MER4A LTR ERV1 -566 98 1 1557 158 39 3 chr10 78295239 78295523 -62021242 - AluSx SINE Alu -16 296 3 3607 190 49 57 chr10 78295545 78296381 -62020384 + MER21B LTR ERV1 12 840 -23 213 224 0 132 chr10 78300283 78300359 -62016406 + MIR SINE MIR 123 188 -74 2082 129 7 0 chr10 78300364 78300674 -62016091 + AluSx SINE Alu 1 312 0 1470 147 53 23 chr10 78301587 78301887 -62014878 + L1MA8 LINE L1 5980 6288 -3 2171 100 7 7 chr10 78302166 78302301 -62014464 + AluSx SINE Alu 1 135 -177 2498 53 0 0 chr10 78302301 78302600 -62014165 + AluY SINE Alu 1 299 -12 2171 100 7 7 chr10 78302600 78302764 -62014001 + AluSx SINE Alu 134 300 -12 226 158 26 0 chr10 78302773 78302811 -62013954 - MIR SINE MIR -111 151 113 384 258 110 86 chr10 78302951 78303277 -62013488 - L1ME4a LINE L1 -1 6120 5787 22 35 0 0 chr10 78303307 78303336 -62013429 + AT_rich Low_complexity Low_complexity 1 29 0 2807 178 14 8 chr10 78304369 78304869 -62011896 + L1PA16 LINE L1 5654 6156 -10 788 144 0 144 chr10 78305090 78305243 -62011522 - MER50 LTR ERV1 -130 604 485 2823 82 3 11 chr10 78305243 78305608 -62011157 + THE1B LTR MaLR 3 364 0 788 144 0 144 chr10 78305608 78305655 -62011110 - MER50 LTR ERV1 -249 485 433 * 1232 134 40 5 chr10 78305647 78305870 -62010895 - MER50 LTR ERV1 -503 231 1 2387 86 10 6 chr10 78305872 78306186 -62010579 - MER50-int LTR ERV1 -10 7195 6881 612 181 105 0 chr10 78307733 78307900 -62008865 + MER113 DNA MER1_type? 31 215 -306 1506 202 30 37 chr10 78307900 78308265 -62008500 - Tigger7 DNA MER2_type 0 2491 1 28 48 0 0 chr10 78308265 78308307 -62008458 + AT_rich Low_complexity Low_complexity 1 42 0 499 293 25 0 chr10 78308315 78308472 -62008293 + MER113 DNA MER1_type? 186 346 -175 249 57 0 0 chr10 78308960 78308995 -62007770 + (CA)n Simple_repeat Simple_repeat 2 36 0 208 234 106 0 chr10 78309515 78309562 -62007203 - L2 LINE L2 -5 3308 3257 632 244 29 48 chr10 78309713 78309922 -62006843 + MIR SINE MIR 30 234 -28 459 262 19 55 chr10 78310459 78310768 -62005997 + L1MEd LINE L1 625 922 -5197 2249 98 0 0 chr10 78311008 78311304 -62005461 - AluSx SINE Alu -16 296 1 435 290 83 79 chr10 78311474 78311905 -62004860 - L1MCc LINE L1 -5970 453 21 1910 248 79 19 chr10 78312801 78313647 -62003118 + L1M4 LINE L1 3035 3931 -2215 1855 122 8 0 chr10 78313687 78313950 -62002815 + AluJb SINE Alu 4 268 -44 2321 97 0 0 chr10 78314642 78314951 -62001814 + AluSg SINE Alu 1 309 -1 1599 73 0 23 chr10 78319196 78319416 -61997349 - AluY SINE Alu 0 311 97 9233 32 5 3 chr10 78319416 78320485 -61996280 + MER11C LTR ERVK 1 1071 0 800 90 0 0 chr10 78320485 78320585 -61996180 - AluY SINE Alu -209 102 3 392 296 41 36 chr10 78321085 78321281 -61995484 - MIR SINE MIR -44 218 22 180 0 0 0 chr10 78322083 78322103 -61994662 + (A)n Simple_repeat Simple_repeat 1 20 0 2039 153 132 3 chr10 78322382 78322761 -61994004 + MSTA LTR MaLR 1 428 0 3419 178 2 2 chr10 78322761 78323350 -61993415 + MSTA-int LTR MaLR 1 589 -1062 628 205 0 16 chr10 78323371 78323493 -61993272 + MSTA-int LTR MaLR 554 673 -978 4189 109 5 7 chr10 78323493 78324109 -61992656 + L1PB1 LINE L1 5537 6151 0 358 81 48 0 chr10 78324115 78324177 -61992588 + GA-rich Low_complexity Low_complexity 3 67 0 652 236 46 61 chr10 78324179 78324505 -61992260 + L1M4 LINE L1 4146 4466 -1680 628 184 20 54 chr10 78324505 78324652 -61992113 + FLAM_A SINE Alu 1 142 0 1452 169 28 58 chr10 78324655 78324980 -61991785 + L1M4 LINE L1 4461 4775 -1371 2186 227 78 4 chr10 78324980 78325673 -61991092 - ERVL LTR ERVL -1176 4588 3751 2134 88 3 0 chr10 78325727 78326011 -61990754 + AluY SINE Alu 1 285 -26 36 0 0 0 chr10 78326011 78326047 -61990718 + AT_rich Low_complexity Low_complexity 1 36 0 900 224 48 33 chr10 78326385 78326479 -61990286 + L1MC4 LINE L1 7578 7669 -373 1946 168 22 38 chr10 78326479 78326848 -61989917 + MLT1A1 LTR MaLR 3 365 0 900 224 48 33 chr10 78326848 78327025 -61989740 + L1MC4 LINE L1 7669 7853 -189 339 289 72 15 chr10 78327986 78328272 -61988493 - MER113 DNA MER1_type? 0 521 175 1393 147 0 22 chr10 78328360 78328585 -61988180 - AluJo SINE Alu -92 220 1 272 217 72 14 chr10 78328964 78329033 -61987732 + MIR SINE MIR 168 240 -22 764 194 19 58 chr10 78329502 78329576 -61987189 - L1MA4 LINE L1 -1 6299 6224 2421 57 0 0 chr10 78329576 78329872 -61986893 - AluY SINE Alu -15 296 1 764 194 19 58 chr10 78329872 78330055 -61986710 - L1MA4 LINE L1 -76 6224 6052 409 253 91 52 chr10 78330259 78330307 -61986458 + MIR SINE MIR 71 116 -146 2146 108 50 66 chr10 78330307 78330688 -61986077 + THE1C LTR MaLR 1 375 0 409 253 91 52 chr10 78330688 78330793 -61985972 + MIR SINE MIR 116 230 -32 451 275 94 69 chr10 78331312 78331545 -61985220 + MIR SINE MIR 23 261 -1 224 316 43 17 chr10 78332068 78332185 -61984580 + MIR SINE MIR 86 205 -57 189 0 0 0 chr10 78332204 78332225 -61984540 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 324 0 0 0 chr10 78332224 78332260 -61984505 + (CA)n Simple_repeat Simple_repeat 1 36 0 306 0 0 0 chr10 78332728 78332762 -61984003 + (ATG)n Simple_repeat Simple_repeat 2 35 0 430 330 69 21 chr10 78332767 78332955 -61983810 - MIR SINE MIR -54 208 12 246 156 0 0 chr10 78332979 78333024 -61983741 + GA-rich Low_complexity Low_complexity 2 46 0 224 226 11 75 chr10 78333302 78333395 -61983370 + MIR SINE MIR 51 137 -125 568 189 51 0 chr10 78333450 78333575 -61983190 - MER3 DNA MER1_type -101 108 1 488 191 14 72 chr10 78333632 78333772 -61982993 - L1ME1 LINE L1 -95 6071 5938 943 209 164 64 chr10 78334034 78334364 -61982401 - MLT1A1 LTR MaLR 0 365 3 318 50 0 0 chr10 78335479 78335519 -61981246 + (TG)n Simple_repeat Simple_repeat 2 41 0 275 293 121 44 chr10 78335622 78335919 -61980846 + MER113 DNA MER1_type? 110 429 -92 3160 146 37 12 chr10 78336896 78337459 -61979306 - L1MB7 LINE L1 -199 5985 5409 2383 57 7 3 chr10 78337808 78338108 -61978657 + AluY SINE Alu 1 301 -10 276 116 23 0 chr10 78338420 78338463 -61978302 + L2 LINE L2 3262 3305 -8 614 245 26 20 chr10 78338481 78338632 -61978133 - L2 LINE L2 0 3313 3162 1062 206 32 51 chr10 78338719 78338801 -61977964 - MIR SINE MIR -9 253 171 4091 39 16 4 chr10 78338801 78339285 -61977480 - LTR2B LTR ERV1 0 490 1 1062 206 32 51 chr10 78339285 78339455 -61977310 - MIR SINE MIR -91 171 6 1616 202 66 68 chr10 78339914 78340401 -61976364 + MER54A LTR ERVL 147 844 -57 1974 109 11 0 chr10 78340401 78340668 -61976097 + AluSx SINE Alu 42 311 -1 1616 202 66 68 chr10 78340668 78340726 -61976039 + MER54A LTR ERVL 844 901 0 261 295 8 70 chr10 78340976 78341105 -61975660 + L2 LINE L2 3188 3308 -5 * 317 310 70 35 chr10 78341098 78341240 -61975525 - MIR3 SINE MIR -16 192 46 352 286 17 84 chr10 78342660 78342838 -61973927 - MIR SINE MIR -28 234 69 1906 56 0 13 chr10 78342879 78343113 -61973652 - AluSg1 SINE Alu -78 231 1 205 276 17 0 chr10 78343336 78343394 -61973371 + (CATA)n Simple_repeat Simple_repeat 3 61 0 615 267 68 6 chr10 78343394 78343555 -61973210 - MIR SINE MIR -69 193 23 313 326 118 7 chr10 78344035 78344170 -61972595 + MIR3 SINE MIR 33 182 -26 384 295 85 65 chr10 78344502 78344702 -61972063 + L2 LINE L2 3030 3233 -39 184 256 205 0 chr10 78344855 78344972 -61971793 - L2 LINE L2 -213 3059 2919 931 239 17 4 chr10 78345152 78345382 -61971383 - MER58 DNA MER1_type -70 271 39 332 378 19 6 chr10 78345404 78345560 -61971205 - L2 LINE L2 -558 2756 2599 345 298 24 48 chr10 78345842 78345869 -61970896 + L1MC4 LINE L1 7786 7812 -230 2540 70 0 0 chr10 78345869 78346171 -61970594 + AluY SINE Alu 1 302 -9 345 298 24 48 chr10 78346171 78346267 -61970498 + L1MC4 LINE L1 7812 7906 -136 436 219 114 24 chr10 78346625 78346748 -61970017 - MIR SINE MIR -17 245 112 594 274 26 7 chr10 78346748 78346901 -61969864 + MER45A DNA AcHobo 20 175 -3 2383 69 14 0 chr10 78347085 78347374 -61969391 - AluY SINE Alu -18 293 1 801 251 34 0 chr10 78347957 78348132 -61968633 + MIR SINE MIR 23 203 -59 1106 36 0 29 chr10 78348220 78348359 -61968406 + L1PA8 LINE L1 6031 6165 -7 2307 94 0 13 chr10 78350127 78350426 -61966339 - AluSc SINE Alu -14 295 1 198 358 83 0 chr10 78350867 78350987 -61965778 - L2 LINE L2 -22 3291 3162 525 323 24 0 chr10 78351004 78351171 -61965594 + MIR SINE MIR 37 207 -55 208 170 0 43 chr10 78351274 78351321 -61965444 + L2 LINE L2 3215 3259 -13 597 146 0 0 chr10 78352820 78352909 -61963856 + 5S rRNA rRNA 2 90 -31 192 220 0 60 chr10 78353527 78353577 -61963188 - L2 LINE L2 -1 3271 3225 326 336 46 23 chr10 78353756 78353887 -61962878 - MER5A DNA MER1_type -1 188 55 210 316 53 13 chr10 78354442 78354518 -61962247 - MIR SINE MIR -85 177 99 266 264 146 111 chr10 78354598 78354700 -61962065 - L2 LINE L2 -8 3264 3154 1002 232 52 0 chr10 78354700 78354911 -61961854 - MER58A DNA MER1_type -1 223 2 266 264 146 111 chr10 78354911 78354952 -61961813 - L2 LINE L2 -118 3154 3116 197 333 140 0 chr10 78355053 78355146 -61961619 + MIR3 SINE MIR 94 199 -9 1356 83 41 23 chr10 78355336 78355554 -61961211 - pTR5 LTR ERV1 -2046 392 171 287 208 52 0 chr10 78355573 78355650 -61961115 - LTR30 LTR ERV1 -98 624 544 3011 127 24 32 chr10 78355654 78356531 -61960234 - pTR5 LTR ERV1 -417 2021 735 830 218 5 56 chr10 78357211 78357408 -61959357 + MER5A DNA MER1_type 2 188 -1 267 286 9 71 chr10 78357628 78357740 -61959025 - L3 LINE CR1 -1 1576 1472 342 264 58 58 chr10 78357772 78357927 -61958838 - L2 LINE L2 0 3313 3159 1214 243 70 5 chr10 78357933 78358304 -61958461 + L1MD3 LINE L1 7562 7956 -39 306 355 37 0 chr10 78359061 78359168 -61957597 + MIR3 SINE MIR 88 198 -10 236 296 10 51 chr10 78359351 78359449 -61957316 - MIR SINE MIR -50 212 119 300 245 11 133 chr10 78360232 78360420 -61956345 + MIR SINE MIR 52 216 -46 340 228 66 6 chr10 78360489 78360751 -61956014 + MLT1J2 LTR MaLR 52 445 -5 2127 111 3 3 chr10 78360834 78361122 -61955643 + AluSx SINE Alu 1 288 -24 484 280 72 68 chr10 78361286 78361885 -61954880 + L1MC/D LINE L1 1048 1643 -4567 1924 101 59 18 chr10 78361885 78362171 -61954594 - AluSg SINE Alu -12 298 1 484 280 72 68 chr10 78362171 78362205 -61954560 + L1MC/D LINE L1 1643 3515 -2695 930 276 114 17 chr10 78362241 78362661 -61954104 + L1MC/D LINE L1 5359 5819 -2053 302 268 115 29 chr10 78363211 78363454 -61953311 + L1MB7 LINE L1 5548 5822 -299 1169 89 9 70 chr10 78363524 78363738 -61953027 + L1MA4A LINE L1 6101 6301 -2 1032 267 141 44 chr10 78363814 78364181 -61952584 + L2 LINE L2 2771 3193 -120 2435 97 3 0 chr10 78364181 78364492 -61952273 - AluSx SINE Alu 0 312 1 1032 267 141 44 chr10 78364492 78364625 -61952140 + L2 LINE L2 3193 3312 -1 282 266 36 28 chr10 78365175 78365330 -61951435 + MIR SINE MIR 11 164 -67 522 325 44 34 chr10 78365454 78365955 -61950810 - L1M4 LINE L1 -1770 4376 3871 255 288 17 0 chr10 78366372 78366431 -61950334 + L3 LINE CR1 1394 1453 -124 425 136 0 12 chr10 78366675 78366688 -61950077 + (CA)n Simple_repeat Simple_repeat 2 14 -67 2168 99 11 0 chr10 78366688 78366971 -61949794 + AluSp SINE Alu 1 286 -27 425 136 0 12 chr10 78366971 78367038 -61949727 + (CA)n Simple_repeat Simple_repeat 14 81 0 308 277 21 21 chr10 78367038 78367132 -61949633 - MIR3 SINE MIR -108 100 7 190 256 0 0 chr10 78367166 78367205 -61949560 + L2 LINE L2 3254 3292 -21 1282 179 54 18 chr10 78368525 78368804 -61947961 + L1MB7 LINE L1 5895 6183 -1 687 280 169 9 chr10 78370019 78370244 -61946521 + MIR SINE MIR 2 262 0 239 281 32 29 chr10 78370406 78370487 -61946278 - MIR SINE MIR -125 83 3 1345 157 126 57 chr10 78370644 78370906 -61945859 + AluJo SINE Alu 1 280 -32 320 272 76 0 chr10 78372080 78372172 -61944593 - MIR SINE MIR -115 147 49 1673 167 84 4 chr10 78372571 78372846 -61943919 + AluJo SINE Alu 1 297 -15 2191 186 44 36 chr10 78373592 78374092 -61942673 + MLT1D LTR MaLR 1 504 -1 202 338 39 0 chr10 78374124 78374201 -61942564 - L2 LINE L2 -40 3232 3153 289 311 87 25 chr10 78374252 78374400 -61942365 + L2 LINE L2 2860 3024 -248 1929 166 0 3 chr10 78374400 78374696 -61942069 - AluJb SINE Alu -17 295 1 289 311 87 25 chr10 78374696 78374743 -61942022 + L2 LINE L2 3024 3067 -205 211 179 0 0 chr10 78374882 78374921 -61941844 + L2 LINE L2 3168 3206 -66 5589 130 15 13 chr10 78374995 78375943 -61940822 + L1MA8 LINE L1 5328 6277 -14 286 291 138 50 chr10 78376275 78376595 -61940170 + L2 LINE L2 2938 3285 -28 1325 136 64 34 chr10 78376831 78377096 -61939669 + L1MB7 LINE L1 5871 6143 -41 771 229 34 17 chr10 78377140 78377315 -61939450 + MIR SINE MIR 13 190 -72 484 273 65 26 chr10 78377546 78377777 -61938988 + MLT1L LTR MaLR 361 600 -15 310 233 111 0 chr10 78378817 78378907 -61937858 + L1ME2 LINE L1 6065 6164 0 256 336 172 0 chr10 78379327 78379461 -61937304 + MIR SINE MIR 100 256 -6 290 345 34 8 chr10 78380477 78380596 -61936169 - L2 LINE L2 -1 3271 3150 280 310 103 9 chr10 78380851 78380967 -61935798 - MIR SINE MIR -116 146 20 232 311 27 0 chr10 78381723 78381797 -61934968 - MIR3 SINE MIR -16 192 117 462 306 8 0 chr10 78382177 78382311 -61934454 - MIR SINE MIR -78 184 50 218 323 129 0 chr10 78382607 78382700 -61934065 - MIR SINE MIR 0 262 158 2358 98 3 0 chr10 78382747 78383043 -61933722 + AluSq SINE Alu 1 297 -16 579 338 6 0 chr10 78383081 78383238 -61933527 - MIR SINE MIR -104 158 1 772 254 27 47 chr10 78383784 78384040 -61932725 + MIR SINE MIR 2 252 -10 910 254 77 36 chr10 78384134 78384552 -61932213 + MLT1J2 LTR MaLR 16 450 0 237 263 0 0 chr10 78384892 78384949 -61931816 + MIR SINE MIR 97 153 -109 553 282 35 0 chr10 78384949 78385091 -61931674 - MER63 DNA MER1_type -289 773 1 239 325 60 60 chr10 78385091 78385291 -61931474 - L2 LINE L2 -267 3005 2806 516 191 27 35 chr10 78385319 78385504 -61931261 - MLT1H1 LTR MaLR 0 555 334 333 62 0 0 chr10 78385522 78385570 -61931195 + (TC)n Simple_repeat Simple_repeat 1 48 0 297 259 26 83 chr10 78385615 78385843 -61930922 - MLT1H1 LTR MaLR -331 264 1 393 198 99 22 chr10 78387072 78387163 -61929602 + MER91C DNA MER1_type 11 108 -32 243 146 0 0 chr10 78387730 78387771 -61928994 + (CA)n Simple_repeat Simple_repeat 1 41 0 1404 120 8 68 chr10 78387871 78388105 -61928660 + AluJb SINE Alu 2 221 -91 254 221 47 58 chr10 78388234 78388320 -61928445 - MER91B DNA MER1_type -98 92 8 197 383 0 17 chr10 78388374 78388434 -61928331 + L3b LINE CR1 1510 1568 -15 936 221 89 4 chr10 78388597 78388832 -61927933 + MIR SINE MIR 4 258 -4 507 263 20 13 chr10 78388856 78389008 -61927757 + MIR SINE MIR 110 262 0 2109 141 0 22 chr10 78389637 78389950 -61926815 + AluSx SINE Alu 1 306 -6 3900 147 40 42 chr10 78391288 78391335 -61925430 - L1MB2 LINE L1 -2 6169 6123 2223 58 50 0 chr10 78391335 78391612 -61925153 + AluY SINE Alu 1 291 -20 3900 147 40 42 chr10 78391612 78392285 -61924480 - L1MB2 LINE L1 -48 6123 5450 206 219 0 0 chr10 78393191 78393232 -61923533 + CT-rich Low_complexity Low_complexity 4 44 0 1740 124 55 35 chr10 78394598 78394888 -61921877 + AluSx SINE Alu 2 297 -15 215 267 0 0 chr10 78395959 78396004 -61920761 + L2 LINE L2 3247 3291 -22 191 156 0 44 chr10 78396168 78396213 -61920552 + L3b LINE CR1 1372 1414 -169 412 222 236 7 chr10 78396901 78397045 -61919720 + MER5A DNA MER1_type 4 180 -9 1862 164 10 10 chr10 78397048 78397353 -61919412 + AluJb SINE Alu 1 305 -7 315 269 11 11 chr10 78398170 78398263 -61918502 - MIR SINE MIR -86 176 84 305 373 66 18 chr10 78399000 78399228 -61917537 - MIR SINE MIR -1 261 23 2221 100 0 3 chr10 78399258 78399549 -61917216 + AluSc SINE Alu 1 290 -19 405 264 0 9 chr10 78400240 78400350 -61916415 - MIR3 SINE MIR -13 195 87 318 26 0 0 chr10 78401000 78401039 -61915726 + (CA)n Simple_repeat Simple_repeat 2 40 0 1463 116 5 5 chr10 78403853 78404060 -61912705 - AluSx SINE Alu -105 207 1 253 273 68 93 chr10 78404268 78404473 -61912292 + HAL1b LINE L1 448 647 -701 1134 252 113 56 chr10 78404568 78405314 -61911451 + HAL1b LINE L1 561 1348 0 1831 184 0 0 chr10 78405319 78405628 -61911137 + AluSx SINE Alu 1 309 -3 474 18 0 0 chr10 78408258 78408338 -61908427 + (TG)n Simple_repeat Simple_repeat 1 135 0 474 18 0 0 chr10 78408338 78408393 -61908372 + (TG)n Simple_repeat Simple_repeat 1 55 0 2344 125 36 31 chr10 78408393 78408753 -61908012 + THE1B LTR MaLR 3 364 0 382 265 61 64 chr10 78408947 78409155 -61907610 + MIR SINE MIR 13 216 -46 444 320 88 41 chr10 78410764 78411058 -61905707 + L3 LINE CR1 1016 1323 -254 23 0 0 0 chr10 78411636 78411659 -61905106 + AT_rich Low_complexity Low_complexity 1 23 0 442 264 49 15 chr10 78411664 78411839 -61904926 - MIR SINE MIR -57 205 17 319 338 84 21 chr10 78412498 78412640 -61904125 - L2 LINE L2 0 3272 3122 6148 94 11 4 chr10 78412716 78413574 -61903191 + L1PA10 LINE L1 5305 6168 0 962 308 41 39 chr10 78414163 78414654 -61902111 - MLT1J LTR MaLR 0 511 20 445 254 119 34 chr10 78414665 78414901 -61901864 - HAL1 LINE L1 -855 1652 1397 660 290 92 23 chr10 78414939 78415418 -61901347 - HAL1 LINE L1 -1184 1323 812 195 42 0 0 chr10 78415488 78415512 -61901253 + (CA)n Simple_repeat Simple_repeat 2 25 0 2506 256 78 41 chr10 78416125 78416676 -61900089 + L1MEc LINE L1 1297 1826 -2332 315 0 0 0 chr10 78416676 78416711 -61900054 + (TG)n Simple_repeat Simple_repeat 2 36 0 2506 256 78 41 chr10 78416711 78417219 -61899546 + L1MEc LINE L1 1826 2314 -1844 884 177 0 0 chr10 78417219 78417349 -61899416 + FLAM_C SINE Alu 1 130 -3 2506 256 78 41 chr10 78417349 78418312 -61898453 + L1MEc LINE L1 2314 3318 -840 723 228 66 18 chr10 78418313 78418541 -61898224 + L1MD3 LINE L1 7755 7993 -2 664 240 29 0 chr10 78418565 78418736 -61898029 + L1M4 LINE L1 5158 5333 -813 354 281 122 53 chr10 78418779 78419273 -61897492 + L1M4 LINE L1 4742 5269 -877 2267 113 10 0 chr10 78419550 78419852 -61896913 + AluSx SINE Alu 1 305 -7 290 296 30 30 chr10 78420177 78420346 -61896419 - L1M4 LINE L1 -3600 2546 2378 586 61 49 0 chr10 78420402 78420484 -61896281 + L1MC1 LINE L1 6248 6333 0 2603 58 0 0 chr10 78421278 78421587 -61895178 - AluY SINE Alu -2 309 1 820 161 112 58 chr10 78421599 78421841 -61894924 - MER96B DNA MER1_type? -161 256 2 458 298 37 43 chr10 78422005 78422193 -61894572 - MARNA DNA Mariner -7 579 393 690 306 14 9 chr10 78422879 78423098 -61893667 + MIR SINE MIR 6 225 -37 874 263 92 62 chr10 78423914 78424554 -61892211 - L2 LINE L2 -131 3182 2527 276 77 0 0 chr10 78428361 78428400 -61888365 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr10 78430446 78430468 -61886297 + AT_rich Low_complexity Low_complexity 1 22 0 2520 67 0 6 chr10 78431942 78432255 -61884510 + AluY SINE Alu 1 311 0 198 0 0 0 chr10 78432806 78432828 -61883937 + (T)n Simple_repeat Simple_repeat 1 22 0 329 0 24 0 chr10 78433684 78433725 -61883040 + (CA)n Simple_repeat Simple_repeat 2 43 0 22 0 0 0 chr10 78434909 78434931 -61881834 + AT_rich Low_complexity Low_complexity 1 22 0 504 281 33 13 chr10 78435860 78436013 -61880752 + MIR3 SINE MIR 35 190 -18 427 203 13 0 chr10 78436915 78436994 -61879771 - Tigger5 DNA MER2_type 0 2323 2244 294 279 114 0 chr10 78437044 78437123 -61879642 - Tigger5 DNA MER2_type -2235 88 1 198 234 0 0 chr10 78437125 78437172 -61879593 + L2 LINE L2 3267 3313 0 194 306 0 56 chr10 78440322 78440394 -61876371 - MIR3 SINE MIR -25 183 116 216 0 0 0 chr10 78441077 78441101 -61875664 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 189 0 0 0 chr10 78441805 78441826 -61874939 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 877 183 56 6 chr10 78442532 78442712 -61874053 - MER5A DNA MER1_type 0 189 1 375 23 0 0 chr10 78442913 78442957 -61873808 + (TAA)n Simple_repeat Simple_repeat 2 45 0 231 103 0 0 chr10 78443401 78443440 -61873325 + (A)n Simple_repeat Simple_repeat 1 39 0 444 161 0 0 chr10 78443841 78443922 -61872843 + (TG)n Simple_repeat Simple_repeat 2 82 0 414 39 0 0 chr10 78445234 78445286 -61871479 + (CA)n Simple_repeat Simple_repeat 2 53 0 276 224 0 0 chr10 78446515 78446582 -61870183 + (CA)n Simple_repeat Simple_repeat 2 68 0 1823 161 7 0 chr10 78447086 78447377 -61869388 - AluSx SINE Alu -19 293 1 280 296 44 0 chr10 78448377 78448512 -61868253 + (TG)n Simple_repeat Simple_repeat 2 142 0 198 0 0 0 chr10 78448589 78448611 -61868154 + (TG)n Simple_repeat Simple_repeat 1 22 0 191 292 105 6 chr10 78449107 78449198 -61867567 + MIR SINE MIR 49 140 -68 229 188 0 62 chr10 78449970 78450018 -61866747 + L1MC4a LINE L1 5826 5870 -1938 579 133 0 0 chr10 78450039 78450144 -61866621 + (TA)n Simple_repeat Simple_repeat 1 105 0 920 276 121 45 chr10 78450145 78450772 -61865993 + L1MC4a LINE L1 5858 6532 -1276 1611 211 94 23 chr10 78450780 78451173 -61865592 + MLT1D LTR MaLR 4 424 -81 2073 221 129 32 chr10 78451313 78452090 -61864675 + L1MC4 LINE L1 6763 7614 -428 324 177 35 5 chr10 78452095 78452209 -61864556 - MER5A DNA MER1_type -14 175 4 710 267 39 90 chr10 78452214 78452520 -61864245 + L1MC4 LINE L1 7606 7886 -156 2031 129 4 0 chr10 78452520 78452832 -61863933 + AluSq SINE Alu 2 314 0 710 267 39 90 chr10 78452832 78452979 -61863786 + L1MC4 LINE L1 7886 8039 -3 189 147 0 0 chr10 78453323 78453357 -61863408 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 314 231 0 0 chr10 78453452 78453517 -61863248 - L2 LINE L2 -13 3300 3236 222 396 9 9 chr10 78453699 78453805 -61862960 + MIR SINE MIR 30 135 -73 638 239 167 105 chr10 78453973 78454392 -61862373 - MLT1J2 LTR MaLR 0 450 6 219 203 102 51 chr10 78454543 78454602 -61862163 + L2 LINE L2 3209 3270 -2 331 287 37 28 chr10 78454607 78454715 -61862050 + L2 LINE L2 3188 3296 -17 185 291 118 24 chr10 78454993 78455120 -61861645 + L3 LINE CR1 211 349 -1228 210 105 0 0 chr10 78455423 78455461 -61861304 + (TC)n Simple_repeat Simple_repeat 1 38 0 248 289 35 53 chr10 78455890 78456004 -61860761 + L2 LINE L2 2992 3103 -169 1848 57 0 0 chr10 78456323 78456552 -61860213 + L1PA7 LINE L1 5909 6137 -17 1953 238 54 30 chr10 78456598 78457266 -61859499 + L1M4 LINE L1 3432 4115 -2031 239 240 0 0 chr10 78457951 78458001 -61858764 + CT-rich Low_complexity Low_complexity 2 51 0 356 234 40 32 chr10 78458016 78458140 -61858625 - MIR SINE MIR -1 261 137 224 263 158 21 chr10 78458995 78459090 -61857675 - MER5B DNA MER1_type -70 108 1 255 311 106 45 chr10 78459123 78459255 -61857510 + MIR SINE MIR 106 245 -17 325 254 25 25 chr10 78459301 78459423 -61857342 - MIR SINE MIR -34 228 107 420 272 134 71 chr10 78459670 78459938 -61856827 + MLT1J LTR MaLR 223 507 -4 415 224 118 29 chr10 78460028 78460198 -61856567 - L1ME4a LINE L1 -1 6120 5936 297 287 62 37 chr10 78460203 78460447 -61856318 - L1ME4a LINE L1 -241 5880 5631 224 339 0 0 chr10 78460663 78460728 -61856037 + L2 LINE L2 3227 3291 -22 571 239 38 25 chr10 78460874 78461033 -61855732 - MIR SINE MIR 0 262 102 372 308 19 0 chr10 78461173 78461277 -61855488 - MIR SINE MIR -147 115 10 393 22 0 0 chr10 78461571 78461617 -61855148 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1450 17 28 0 chr10 78461618 78461796 -61854969 - L1PA2 LINE L1 -12 6143 5961 444 0 0 0 chr10 78461796 78461845 -61854920 + L1HS LINE L1 5902 5950 -205 541 283 24 45 chr10 78462163 78462410 -61854355 + MLT1J LTR MaLR 241 482 -29 378 367 27 11 chr10 78462729 78462917 -61853848 + MIR SINE MIR 36 226 -36 248 305 76 66 chr10 78462988 78463185 -61853580 - L2 LINE L2 -3 3310 3112 192 343 0 27 chr10 78466028 78466101 -61850664 + L2 LINE L2 3200 3270 -2 337 259 25 0 chr10 78466127 78466208 -61850557 - L2 LINE L2 0 3313 3231 234 301 46 39 chr10 78466922 78467075 -61849690 + L1ME LINE L1 5568 5721 -400 2602 40 0 3 chr10 78467162 78467463 -61849302 + AluY SINE Alu 1 300 -11 230 383 111 9 chr10 78467725 78467942 -61848823 - L2 LINE L2 -226 3046 2808 258 288 12 0 chr10 78468906 78468986 -61847779 + L1M2 LINE L1 5495 5575 -725 351 260 7 68 chr10 78469153 78469299 -61847466 - L1MEd LINE L1 -2073 4056 3920 901 163 0 0 chr10 78469428 78469569 -61847196 - AluSq/x SINE Alu -172 141 1 642 274 107 44 chr10 78469575 78469920 -61846845 - L1MEd LINE L1 -3296 2833 2511 450 204 38 86 chr10 78469920 78470106 -61846659 + MER104 DNA MER2_type 2 178 -2 642 274 107 44 chr10 78470106 78470258 -61846507 - L1MEd LINE L1 -3618 2511 2370 766 83 8 8 chr10 78470258 78470379 -61846386 + (TAGA)n Simple_repeat Simple_repeat 2 122 0 642 274 107 44 chr10 78470379 78470537 -61846228 - L1MEd LINE L1 -3759 2370 2136 258 81 0 0 chr10 78470635 78470672 -61846093 + (TA)n Simple_repeat Simple_repeat 2 38 0 613 261 87 76 chr10 78470997 78471699 -61845066 - L1MEd LINE L1 -4535 1594 876 4564 38 4 0 chr10 78471699 78472249 -61844516 + L1PA4 LINE L1 5601 6152 -3 613 261 87 76 chr10 78472249 78472519 -61844246 - L1MEd LINE L1 -5253 876 611 1873 161 7 0 chr10 78472792 78473090 -61843675 + AluJb SINE Alu 1 300 -12 1357 206 48 43 chr10 78473816 78474233 -61842532 + LTR52 LTR ERVL 2 420 -1 3028 227 66 70 chr10 78474291 78475441 -61841324 + LTR52-int LTR ERVL 83 1227 -2329 1189 208 14 58 chr10 78475551 78475844 -61840921 + LTR52-int LTR ERVL 1270 1549 -2007 3677 192 36 17 chr10 78475885 78476287 -61840478 - L1M4 LINE L1 -1014 5132 4739 2348 116 8 8 chr10 78476287 78476642 -61840123 - THE1A LTR MaLR 0 355 1 3677 192 36 17 chr10 78476642 78477135 -61839630 - L1M4 LINE L1 -1407 4739 4220 1152 223 69 40 chr10 78477135 78477511 -61839254 + LTR52 LTR ERVL 13 399 -22 337 277 109 54 chr10 78477901 78478085 -61838680 - MIR3 SINE MIR -14 194 1 2254 119 0 0 chr10 78478225 78478537 -61838228 + AluSx SINE Alu 1 312 0 261 331 35 21 chr10 78479491 78479633 -61837132 - MIR SINE MIR -9 253 110 440 257 26 46 chr10 78479674 78479826 -61836939 + MIR SINE MIR 23 171 -91 2999 221 59 11 chr10 78479848 78480612 -61836153 + L1MC4a LINE L1 6688 7488 -320 4256 151 41 47 chr10 78480616 78482046 -61834719 + L1MA4 LINE L1 4669 6083 -217 283 182 0 18 chr10 78482103 78482158 -61834607 + LTR47A LTR ERVL 279 332 -120 717 327 9 18 chr10 78482370 78482596 -61834169 + L1PA16 LINE L1 788 1011 -6563 * 12451 229 51 23 chr10 78482591 78487720 -61829045 + L1PA16 LINE L1 2334 7594 -10 22 0 0 0 chr10 78487725 78487747 -61829018 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr10 78487794 78487819 -61828946 + AT_rich Low_complexity Low_complexity 1 25 0 489 300 112 11 chr10 78487821 78488098 -61828667 + L1ME4a LINE L1 5333 5637 -484 273 285 69 7 chr10 78488108 78488252 -61828513 + L1ME4a LINE L1 5733 5885 -236 251 318 71 0 chr10 78488286 78488412 -61828353 + L1ME4a LINE L1 5976 6110 -11 1465 223 3 14 chr10 78488422 78488714 -61828051 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr10 78488714 78488744 -61828021 + AT_rich Low_complexity Low_complexity 1 30 0 993 227 95 7 chr10 78488745 78489049 -61827716 + L1MC4a LINE L1 7477 7807 -1 1917 189 28 19 chr10 78489086 78489519 -61827246 + L1MB7 LINE L1 5743 6179 -5 198 194 0 0 chr10 78489526 78489562 -61827203 + MIR SINE MIR 215 250 -12 1101 274 34 42 chr10 78492008 78492573 -61824192 + L1MC4 LINE L1 37 677 -5719 2034 247 60 67 chr10 78492599 78493653 -61823112 + L1M4 LINE L1 4160 5205 -941 1122 250 99 31 chr10 78493649 78494334 -61822431 + L1MC4 LINE L1 2847 3578 -2637 * 759 246 10 44 chr10 78494329 78494626 -61822139 + L1MC4 LINE L1 4134 4420 -1795 * 1497 220 63 25 chr10 78494682 78495123 -61821642 + L1MC4 LINE L1 4526 4983 -1232 14859 177 42 77 chr10 78495128 78495628 -61821137 + L1MB7 LINE L1 1155 1671 -5894 2005 113 71 41 chr10 78495628 78495992 -61820773 + THE1C LTR MaLR 1 375 0 14859 177 42 77 chr10 78495992 78498171 -61818594 + L1MB7 LINE L1 1671 3925 -3640 189 0 0 0 chr10 78498171 78498192 -61818573 + (GA)n Simple_repeat Simple_repeat 2 22 0 14859 177 42 77 chr10 78498192 78498597 -61818168 + L1MB7 LINE L1 3925 4343 -3222 892 112 86 20 chr10 78498597 78498749 -61818016 - THE1C LTR MaLR -34 341 180 14859 177 42 77 chr10 78498749 78499801 -61816964 + L1MB7 LINE L1 4343 5268 -2297 1144 220 183 26 chr10 78499803 78500272 -61816493 + L1MB7 LINE L1 6889 7431 -172 621 225 92 55 chr10 78499929 78500311 -61816454 + L1MC4 LINE L1 5721 6116 -1995 * 312 255 41 0 chr10 78500303 78500401 -61816364 + L1MA10 LINE L1 6224 6325 -9 * 247 173 19 19 chr10 78500655 78500707 -61816058 - MIR SINE MIR -109 153 102 482 225 40 45 chr10 78500729 78500895 -61815870 + MIR SINE MIR 6 256 -6 345 297 28 97 chr10 78502462 78502752 -61814013 + L1ME3A LINE L1 19 288 -6252 2192 248 86 12 chr10 78502794 78503830 -61812935 + L1ME3A LINE L1 1758 2917 -3623 1117 218 115 27 chr10 78503811 78504333 -61812432 + L1ME3A LINE L1 4543 5110 -1430 * 383 225 19 19 chr10 78504334 78504494 -61812271 + GA-rich Low_complexity Low_complexity 5 164 0 2264 245 73 57 chr10 78504703 78504865 -61811900 + L1ME3A LINE L1 5293 5451 -1113 2266 224 16 0 chr10 78504865 78505316 -61811449 + MER74C LTR ERVL 3 460 0 2264 245 73 57 chr10 78505316 78506392 -61810373 + L1ME3A LINE L1 5451 6558 -6 253 336 47 72 chr10 78506394 78506796 -61809969 - L2 LINE L2 -795 2519 2128 379 327 6 63 chr10 78508019 78508178 -61808587 + MIR3 SINE MIR 50 199 -9 443 250 27 0 chr10 78508479 78508591 -61808174 + MIR SINE MIR 100 214 -48 296 245 39 21 chr10 78508998 78509094 -61807671 - MER20B DNA MER1_type -26 193 92 592 216 163 0 chr10 78509094 78509247 -61807518 - MER45A DNA AcHobo 0 178 1 195 422 35 0 chr10 78509354 78509470 -61807295 - MIR SINE MIR -73 135 16 23545 40 2 0 chr10 78509543 78513224 -61803541 - L1PA5 LINE L1 -8 6146 2461 7509 238 75 28 chr10 78513238 78517511 -61799254 - L1MB8 LINE L1 -5 6242 1734 987 265 33 39 chr10 78517525 78517642 -61799123 - L1M4c LINE L1 -4317 2640 2524 2529 163 23 58 chr10 78517642 78518243 -61798522 - L1MB4 LINE L1 -1 6179 5600 987 265 33 39 chr10 78518243 78518605 -61798160 - L1M4c LINE L1 -4433 2524 2111 632 187 22 8 chr10 78518629 78518763 -61798002 + L1MB4 LINE L1 5987 6122 -58 3820 216 94 22 chr10 78518766 78519672 -61797093 - L1M4c LINE L1 -5884 975 5 236 170 19 0 chr10 78519673 78519726 -61797039 + CT-rich Low_complexity Low_complexity 1 54 0 709 277 62 17 chr10 78521445 78521734 -61795031 + L1ME4a LINE L1 5597 5898 -223 1991 152 13 0 chr10 78521779 78522082 -61794683 - AluJo SINE Alu -5 307 1 501 250 97 42 chr10 78522082 78522298 -61794467 + LTR50 LTR ERVL 1 228 -567 701 221 102 31 chr10 78522316 78522527 -61794238 + LTR50 LTR ERVL 481 714 -81 2028 129 19 71 chr10 78522527 78522937 -61793828 + MLT1B LTR MaLR 1 389 -1 701 221 102 31 chr10 78522937 78522979 -61793786 + LTR50 LTR ERVL 714 752 -43 255 273 79 42 chr10 78524206 78524371 -61792394 + L2 LINE L2 2848 3018 -254 2031 113 7 7 chr10 78524378 78524678 -61792087 + AluSx SINE Alu 2 301 -11 440 302 21 57 chr10 78524678 78524870 -61791895 - L2 LINE L2 -20 3293 3109 204 247 216 21 chr10 78526339 78526436 -61790329 - MER5A DNA MER1_type -6 183 68 1439 190 56 3 chr10 78526519 78526803 -61789962 - AluJb SINE Alu -13 299 1 315 360 64 25 chr10 78527502 78527705 -61789060 - MIR SINE MIR -32 230 20 627 272 83 0 chr10 78528191 78528360 -61788405 + MER5A DNA MER1_type 7 189 0 284 286 0 13 chr10 78528365 78528442 -61788323 - MER5B DNA MER1_type -102 76 1 418 30 134 0 chr10 78528751 78528818 -61787947 + L1PA4 LINE L1 6077 6152 -3 3219 211 16 6 chr10 78530699 78531345 -61785420 + MER82 DNA MER2_type 1 652 -1 22 0 0 0 chr10 78531925 78531947 -61784818 + AT_rich Low_complexity Low_complexity 1 22 0 267 246 0 0 chr10 78533529 78533586 -61783179 + L3 LINE CR1 1515 1571 -6 222 402 29 0 chr10 78534522 78534624 -61782141 + MIR3 SINE MIR 9 113 -95 264 333 15 59 chr10 78535542 78535677 -61781088 - L2 LINE L2 -2 3311 3183 2121 105 3 35 chr10 78536639 78536953 -61779812 + AluSp SINE Alu 1 304 -9 2366 70 0 13 chr10 78537091 78537389 -61779376 + AluY SINE Alu 1 294 -17 350 321 44 41 chr10 78538204 78538543 -61778222 + HAL1b LINE L1 330 669 -679 288 280 136 14 chr10 78540039 78540253 -61776512 + L1ME LINE L1 5449 5688 -433 278 266 0 0 chr10 78540255 78540334 -61776431 + L1ME LINE L1 5776 5854 -267 594 304 69 64 chr10 78541120 78541698 -61775067 + L1MEd LINE L1 658 1238 -4881 617 154 114 8 chr10 78542127 78542250 -61774515 + MER2 DNA MER2_type 209 344 -1 399 314 72 5 chr10 78542251 78542445 -61774320 + L1ME2 LINE L1 5688 5894 -270 22 35 0 0 chr10 78542640 78542669 -61774096 + AT_rich Low_complexity Low_complexity 1 29 0 181 340 43 32 chr10 78543493 78543587 -61773178 + L2 LINE L2 3160 3254 -18 302 289 24 0 chr10 78543606 78543689 -61773076 + L1MC4 LINE L1 6615 6699 -1343 * 368 189 12 47 chr10 78543627 78543796 -61772969 + (CATATA)n Simple_repeat Simple_repeat 4 166 0 195 352 176 9 chr10 78545480 78545588 -61771177 + MIR SINE MIR 20 145 -63 1538 175 21 14 chr10 78545901 78546186 -61770579 - AluJb SINE Alu -25 287 1 195 276 35 0 chr10 78546187 78546245 -61770520 - MIR3 SINE MIR -45 163 104 625 236 7 0 chr10 78547092 78547232 -61769533 - MIR SINE MIR -51 211 71 182 37 37 0 chr10 78547398 78547425 -61769340 + (GA)n Simple_repeat Simple_repeat 2 29 0 440 257 49 28 chr10 78547976 78548120 -61768645 - MIR3 SINE MIR -13 195 49 550 236 68 6 chr10 78550594 78550755 -61766010 + MIR SINE MIR 68 238 -24 260 331 187 7 chr10 78551174 78551313 -61765452 + MIR3 SINE MIR 36 199 -9 21 0 0 0 chr10 78551467 78551488 -61765277 + AT_rich Low_complexity Low_complexity 1 21 0 462 278 14 14 chr10 78553305 78553449 -61763316 + MIR3 SINE MIR 58 201 -7 246 204 74 0 chr10 78553617 78553671 -61763094 + L2 LINE L2 3174 3231 -41 245 356 111 0 chr10 78553856 78553946 -61762819 + L2 LINE L2 3150 3249 -23 333 118 0 0 chr10 78553955 78554006 -61762759 + (TGGA)n Simple_repeat Simple_repeat 1 51 0 210 286 0 0 chr10 78554019 78554068 -61762697 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 254 253 10 0 chr10 78554202 78554301 -61762464 + GA-rich Low_complexity Low_complexity 1 100 0 206 152 0 0 chr10 78555882 78555915 -61760850 + MIR3 SINE MIR 128 160 -48 2195 137 82 18 chr10 78556531 78556873 -61759892 - THE1B LTR MaLR 0 364 1 565 269 36 18 chr10 78557022 78557189 -61759576 - MIR SINE MIR -82 180 11 282 29 0 0 chr10 78559536 78559571 -61757194 + (TG)n Simple_repeat Simple_repeat 2 36 0 15119 35 2 1 chr10 78560497 78562985 -61753780 + L1PA5 LINE L1 3661 6147 -7 38 22 0 0 chr10 78562985 78563030 -61753735 + AT_rich Low_complexity Low_complexity 1 45 0 538 263 80 0 chr10 78563076 78563213 -61753552 - MIR SINE MIR -79 183 36 183 80 0 0 chr10 78563225 78563250 -61753515 + (A)n Simple_repeat Simple_repeat 1 25 0 377 327 91 10 chr10 78563814 78564013 -61752752 + MIR SINE MIR 48 262 0 1843 89 0 39 chr10 78564032 78564290 -61752475 - AluY SINE Alu -6 305 58 180 262 309 0 chr10 78564657 78564741 -61752024 + MIR SINE MIR 27 136 -72 31 26 0 0 chr10 78564952 78564990 -61751775 + AT_rich Low_complexity Low_complexity 1 38 0 357 304 14 22 chr10 78565033 78565171 -61751594 - MIR SINE MIR -57 205 69 1844 163 3 0 chr10 78565171 78565482 -61751283 - AluJo SINE Alu 0 312 1 314 294 107 75 chr10 78566649 78567023 -61749742 + L1MC1 LINE L1 550 935 -5135 4051 241 90 101 chr10 78567084 78568910 -61747855 + L1MC1 LINE L1 2074 3854 -2226 4691 161 35 2 chr10 78568910 78569684 -61747081 + L1MC1 LINE L1 5454 6267 0 4051 241 90 101 chr10 78569684 78570901 -61745864 + L1MC1 LINE L1 3854 5083 -997 588 239 81 58 chr10 78570954 78571213 -61745552 + L1ME3A LINE L1 5901 6165 -5 238 317 106 0 chr10 78572127 78572231 -61744534 - MIR SINE MIR -100 162 48 264 59 0 0 chr10 78572963 78572997 -61743768 + (CA)n Simple_repeat Simple_repeat 2 35 0 393 316 86 26 chr10 78573015 78573167 -61743598 - MIR3 SINE MIR -15 193 33 355 221 0 13 chr10 78574419 78574496 -61742269 - MIR SINE MIR -122 140 65 518 305 49 20 chr10 78574510 78574756 -61742009 + MIR SINE MIR 3 255 -7 402 254 36 9 chr10 78574763 78574873 -61741892 - L2 LINE L2 0 3272 3160 22 56 0 0 chr10 78574897 78574933 -61741832 + AT_rich Low_complexity Low_complexity 1 36 0 2216 138 36 30 chr10 78574950 78575312 -61741453 + THE1B LTR MaLR 1 364 0 1971 119 39 0 chr10 78577634 78577920 -61738845 - AluSx SINE Alu -15 297 1 1952 171 0 3 chr10 78578621 78578925 -61737840 + AluJb SINE Alu 8 310 -2 412 327 97 77 chr10 78579015 78579446 -61737319 + L2 LINE L2 2817 3256 -16 238 266 173 0 chr10 78579629 78579768 -61736997 + L1ME4a LINE L1 5932 6094 -27 875 102 86 0 chr10 78579808 78579936 -61736829 + MER85 DNA T2_type 1 139 0 230 235 29 29 chr10 78580235 78580303 -61736462 - L2 LINE L2 0 3313 3246 389 288 14 55 chr10 78581526 78581672 -61735093 + MIR SINE MIR 57 196 -66 185 277 21 0 chr10 78581725 78581772 -61734993 + L3 LINE CR1 1494 1541 -36 2190 169 41 14 chr10 78584055 78584468 -61732297 - MLT1D LTR MaLR 0 505 82 559 289 76 7 chr10 78584495 78584788 -61731977 - L2 LINE L2 -244 3069 2758 222 37 0 0 chr10 78584834 78584861 -61731904 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 1658 186 6 10 chr10 78586570 78586881 -61729884 + AluJo SINE Alu 1 310 -2 485 322 38 55 chr10 78586921 78587266 -61729499 + L2 LINE L2 2851 3189 -124 680 189 159 82 chr10 78587328 78587561 -61729204 - MER45C DNA AcHobo 0 953 703 297 214 29 29 chr10 78587564 78587634 -61729131 - MER45C DNA AcHobo -559 394 325 555 282 17 29 chr10 78587664 78587838 -61728927 - MER45C DNA AcHobo -740 213 42 1258 180 30 17 chr10 78588134 78588367 -61728398 + MER46A DNA MER2_type 1 236 0 189 355 139 29 chr10 78588436 78588681 -61728084 - L2 LINE L2 -172 3100 2829 2554 219 82 11 chr10 78588760 78589308 -61727457 - MLT1E LTR MaLR -6 587 1 353 344 110 40 chr10 78589407 78589733 -61727032 - L2 LINE L2 -778 2536 2188 186 80 0 0 chr10 78590090 78590115 -61726650 - MIR SINE MIR -64 144 120 203 88 29 0 chr10 78593259 78593293 -61723472 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr10 78595050 78595073 -61721692 + AT_rich Low_complexity Low_complexity 1 23 0 4860 142 34 13 chr10 78595194 78596573 -61720192 + L1MA8 LINE L1 4780 6194 -97 1304 178 22 0 chr10 78596573 78596804 -61719961 + MER46A DNA MER2_type 1 236 0 4860 142 34 13 chr10 78596804 78596901 -61719864 + L1MA8 LINE L1 6194 6287 -4 269 312 96 13 chr10 78598764 78598921 -61717844 + L2 LINE L2 2549 2718 -596 3877 161 40 45 chr10 78598922 78599768 -61716997 + L1MB3 LINE L1 5340 6181 -2 230 256 26 64 chr10 78600104 78600182 -61716583 + L2 LINE L2 2977 3051 -221 887 230 56 14 chr10 78600262 78600475 -61716290 + MIR SINE MIR 15 236 -26 1091 268 91 17 chr10 78600483 78600999 -61715766 + MLT1G LTR MaLR 34 588 -2 396 63 16 0 chr10 78601471 78601534 -61715231 + MER41B LTR ERV1 484 547 -88 591 274 136 71 chr10 78601552 78601608 -61715157 - L1ME4a LINE L1 -289 5832 5781 1809 167 3 7 chr10 78601608 78601901 -61714864 - AluJo SINE Alu -17 295 4 591 274 136 71 chr10 78601901 78602401 -61714364 - L1ME4a LINE L1 -340 5781 5258 29 0 0 0 chr10 78602401 78602430 -61714335 + AT_rich Low_complexity Low_complexity 1 29 0 277 127 266 51 chr10 78603296 78603375 -61713390 - L2 LINE L2 -6 3307 3212 207 208 151 0 chr10 78604886 78604939 -61711826 + L2 LINE L2 3253 3313 0 201 254 14 56 chr10 78605117 78605188 -61711577 - L2 LINE L2 -61 3252 3185 242 164 18 0 chr10 78605201 78605256 -61711509 + GA-rich Low_complexity Low_complexity 1 56 0 432 325 35 54 chr10 78605263 78605494 -61711271 - L2 LINE L2 -164 3149 2924 2908 13 0 0 chr10 78605494 78605812 -61710953 + AluYb8 SINE Alu 1 318 0 432 325 35 54 chr10 78605812 78605894 -61710871 - L2 LINE L2 -389 2924 2842 258 254 0 0 chr10 78607000 78607059 -61709706 + (TG)n Simple_repeat Simple_repeat 2 60 0 23 0 0 0 chr10 78608334 78608357 -61708408 + AT_rich Low_complexity Low_complexity 1 23 0 2324 87 0 0 chr10 78608727 78609013 -61707752 - AluY SINE Alu -25 286 1 11437 177 23 20 chr10 78609120 78610198 -61706567 + L1PB4 LINE L1 2576 3649 -2507 369 0 0 0 chr10 78610198 78610239 -61706526 + (CA)n Simple_repeat Simple_repeat 2 42 0 2313 112 0 0 chr10 78610244 78610556 -61706209 + AluSx SINE Alu 1 312 0 11437 177 23 20 chr10 78610556 78612216 -61704549 + L1PB4 LINE L1 3652 5354 -802 2501 87 0 0 chr10 78612216 78612527 -61704238 + AluY SINE Alu 1 311 0 11437 177 23 20 chr10 78612527 78612956 -61703809 + L1PB4 LINE L1 5354 5780 -376 202 122 20 20 chr10 78612957 78613006 -61703759 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1984 176 22 0 chr10 78613034 78613397 -61703368 + L1PB4 LINE L1 5782 6152 -4 359 192 26 0 chr10 78615483 78615561 -61701204 + MER81 DNA DNA 35 114 0 22 56 0 0 chr10 78615991 78616027 -61700738 + AT_rich Low_complexity Low_complexity 1 36 0 232 308 34 14 chr10 78616292 78616438 -61700327 + MER103 DNA DNA 8 156 -10 2054 120 0 3 chr10 78616750 78617069 -61699696 - AluSx SINE Alu 0 319 2 414 222 25 0 chr10 78618452 78618533 -61698232 - MER44D DNA MER2_type 0 605 523 1242 118 101 17 chr10 78618641 78618879 -61697886 - MER44D DNA MER2_type -79 530 3 14486 201 9 15 chr10 78619690 78621653 -61695112 + L1PB3 LINE L1 1550 3524 -2630 2119 78 3 84 chr10 78621653 78621986 -61694779 + AluSp SINE Alu 1 306 -7 180 0 0 0 chr10 78621990 78622010 -61694755 + (CAA)n Simple_repeat Simple_repeat 2 21 0 14486 201 9 15 chr10 78622010 78624671 -61692094 + L1PB3 LINE L1 3527 6132 -22 213 339 37 64 chr10 78625130 78625239 -61691526 + L2 LINE L2 3011 3116 -156 357 281 27 63 chr10 78625367 78625530 -61691235 - MIR3 SINE MIR -40 168 21 234 306 14 0 chr10 78625707 78625779 -61690986 + GA-rich Low_complexity Low_complexity 4 76 0 238 246 43 29 chr10 78625802 78625871 -61690894 + L2 LINE L2 2826 2895 -419 623 219 28 0 chr10 78625898 78626076 -61690689 - L1M4 LINE L1 -1818 4328 4146 980 152 11 0 chr10 78626106 78626284 -61690481 + CT-rich Low_complexity Low_complexity 1 180 0 280 303 0 20 chr10 78626557 78626656 -61690109 - MIR SINE MIR -10 252 156 541 222 86 0 chr10 78626686 78626848 -61689917 + L1PA16 LINE L1 5991 6166 0 358 238 0 25 chr10 78626980 78627060 -61689705 - MIR SINE MIR -106 156 79 2041 148 7 0 chr10 78628115 78628418 -61688347 - AluSx SINE Alu -7 305 1 251 316 92 0 chr10 78628710 78628786 -61687979 + MIR SINE MIR 112 194 -68 2310 92 23 0 chr10 78629109 78629413 -61687352 + AluSp SINE Alu 1 311 -2 237 227 80 27 chr10 78629786 78629861 -61686904 - MIR3 SINE MIR -16 192 114 200 268 0 18 chr10 78633904 78633960 -61682805 + L2 LINE L2 3218 3272 0 219 356 80 49 chr10 78634198 78634361 -61682404 + L2 LINE L2 3097 3264 -8 1385 149 56 0 chr10 78634441 78634709 -61682056 + L1MA4 LINE L1 6007 6289 -11 288 0 0 0 chr10 78636034 78636066 -61680699 + (CA)n Simple_repeat Simple_repeat 1 32 0 207 316 0 0 chr10 78636645 78636702 -61680063 + (CAA)n Simple_repeat Simple_repeat 3 59 0 2811 167 35 19 chr10 78636708 78637247 -61679518 + MER44D DNA MER2_type 1 603 -2 812 227 123 9 chr10 78637248 78637468 -61679297 - MIR SINE MIR -17 245 1 238 315 34 11 chr10 78637584 78637673 -61679092 + MIR SINE MIR 81 171 -91 182 218 55 0 chr10 78637714 78637769 -61678996 + MIR SINE MIR 169 226 -36 21 0 0 0 chr10 78639206 78639227 -61677538 + AT_rich Low_complexity Low_complexity 1 21 0 347 330 43 22 chr10 78639447 78639771 -61676994 - L1ME LINE L1 -417 5745 5415 211 283 9 18 chr10 78639882 78639995 -61676770 + (TA)n Simple_repeat Simple_repeat 1 112 0 963 229 33 0 chr10 78639996 78640210 -61676555 + MER58A DNA MER1_type 1 221 -3 240 286 116 41 chr10 78640538 78640685 -61676080 + L2 LINE L2 3121 3278 -35 226 362 50 28 chr10 78640888 78641029 -61675736 + MER5B DNA MER1_type 33 176 -2 554 273 36 44 chr10 78642523 78642772 -61673993 + MIR SINE MIR 2 248 -14 265 289 52 28 chr10 78643397 78643608 -61673157 - L1MC/D LINE L1 -1928 5880 5665 248 267 0 0 chr10 78643817 78643892 -61672873 - L1MC4a LINE L1 -1862 5946 5872 244 161 18 0 chr10 78643893 78643949 -61672816 + (TA)n Simple_repeat Simple_repeat 1 57 0 2714 10 0 19 chr10 78644025 78644336 -61672429 + AluY SINE Alu 1 305 -6 1674 168 7 27 chr10 78645073 78645370 -61671395 - AluJb SINE Alu -16 296 6 284 179 0 30 chr10 78645308 78645375 -61671390 - AluJ/FLAM SINE Alu -237 65 1 206 200 38 38 chr10 78645791 78645896 -61670869 + (CGGG)n Simple_repeat Simple_repeat 3 107 0 783 181 0 8 chr10 78646331 78646464 -61670301 + FLAM_A SINE Alu 1 132 -1 294 302 23 23 chr10 78647037 78647209 -61669556 + GA-rich Low_complexity Low_complexity 5 176 0 2100 114 0 7 chr10 78647481 78647780 -61668985 + AluJb SINE Alu 1 297 -15 204 356 83 0 chr10 78648854 78648986 -61667779 + L2 LINE L2 3125 3267 -5 212 205 0 0 chr10 78649737 78649776 -61666989 - L3b LINE CR1 -438 1145 1107 2021 53 8 8 chr10 78650115 78650378 -61666387 + AluY SINE Alu 1 263 -48 1886 128 14 7 chr10 78653233 78653530 -61663235 - AluJb SINE Alu -13 299 1 196 53 53 0 chr10 78654028 78654066 -61662699 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 866 128 0 19 chr10 78654066 78654222 -61662543 + L1MA4 LINE L1 6148 6300 0 24 0 0 0 chr10 78655541 78655565 -61661200 + AT_rich Low_complexity Low_complexity 1 24 0 449 73 0 0 chr10 78656332 78656387 -61660378 + AluSg/x SINE Alu 147 201 -109 532 167 8 42 chr10 78656388 78656508 -61660257 - L1MA4A LINE L1 -193 6110 5995 360 307 32 98 chr10 78656529 78656806 -61659959 - L1MEc LINE L1 -4993 1391 1133 1010 158 0 18 chr10 78656807 78656971 -61659794 - AluJb SINE Alu -13 299 139 1396 191 6 75 chr10 78656971 78657291 -61659474 - AluJb SINE Alu -14 298 1 334 214 116 18 chr10 78657291 78657403 -61659362 - L1MEc LINE L1 -5280 1283 1161 241 190 103 0 chr10 78657626 78657684 -61659081 + MER5C DNA MER1_type 261 324 0 1829 68 17 0 chr10 78657970 78658205 -61658560 + AluY SINE Alu 29 267 -44 185 108 27 0 chr10 78658330 78658367 -61658398 + (TA)n Simple_repeat Simple_repeat 2 39 0 4362 158 33 12 chr10 78658374 78659298 -61657467 - L1PA14 LINE L1 -3 6158 5213 308 260 7 68 chr10 78660790 78660936 -61655829 - L1MEc LINE L1 -2073 4056 3920 918 163 0 0 chr10 78661065 78661206 -61655559 - AluSq/x SINE Alu -171 141 1 376 241 103 15 chr10 78661212 78661407 -61655358 - L1MEc LINE L1 -3296 2833 2622 545 286 74 56 chr10 78661439 78661557 -61655208 - L1MEc LINE L1 -3558 2571 2457 426 199 38 86 chr10 78661557 78661743 -61655022 + MER104 DNA MER2_type 2 178 -2 545 286 74 56 chr10 78661743 78661895 -61654870 - L1MEc LINE L1 -3672 2457 2309 730 86 8 8 chr10 78661895 78662012 -61654753 + (TAGA)n Simple_repeat Simple_repeat 2 118 0 545 286 74 56 chr10 78662012 78662188 -61654577 - L1MEc LINE L1 -3820 2309 2116 276 77 0 0 chr10 78662268 78662307 -61654458 + (TA)n Simple_repeat Simple_repeat 1 39 0 502 326 42 58 chr10 78662519 78662948 -61653817 - L1MEc LINE L1 -4561 1749 1328 342 273 76 51 chr10 78663009 78663324 -61653441 - L1MEc LINE L1 -4902 1217 895 2291 96 5 30 chr10 78663346 78663743 -61653022 + L1PA4 LINE L1 5601 5987 -168 209 116 0 23 chr10 78664078 78664121 -61652644 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 1260 146 0 0 chr10 78664204 78664382 -61652383 - AluSg/x SINE Alu -32 280 103 318 319 46 66 chr10 78664690 78665208 -61651557 - L1MC/D LINE L1 -2033 5775 5268 443 326 48 39 chr10 78665211 78665313 -61651452 - L1MC/D LINE L1 -882 5264 5164 1700 167 3 7 chr10 78665313 78665637 -61651128 - AluJb SINE Alu 0 324 2 443 326 48 39 chr10 78665637 78665870 -61650895 - L1MC/D LINE L1 -982 5164 4925 333 277 126 0 chr10 78665892 78666011 -61650754 - L1MC/D LINE L1 -1315 4831 4698 929 267 79 24 chr10 78666027 78666574 -61650191 - L1M4 LINE L1 -873 5989 5413 28 0 0 0 chr10 78666603 78666631 -61650134 + AT_rich Low_complexity Low_complexity 1 28 0 3664 133 31 0 chr10 78666631 78666984 -61649781 - L1PB3 LINE L1 -7 6147 5806 369 62 0 0 chr10 78666984 78667032 -61649733 + (TG)n Simple_repeat Simple_repeat 2 49 0 207 0 0 0 chr10 78667031 78667054 -61649711 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 3664 133 31 0 chr10 78667032 78667287 -61649478 - L1PB3 LINE L1 -348 5806 5543 23 33 0 0 chr10 78668130 78668160 -61648605 + AT_rich Low_complexity Low_complexity 1 30 0 6717 221 40 34 chr10 78668995 78670500 -61646265 - L1PBa LINE L1 -2024 4838 3304 2210 95 10 20 chr10 78670500 78670805 -61645960 - AluSc SINE Alu -7 302 1 6717 221 40 34 chr10 78670805 78671960 -61644805 - L1PBa LINE L1 -3558 3304 2158 300 266 78 16 chr10 78672390 78672518 -61644247 - L1MC/D LINE L1 -2400 3746 3611 333 333 57 39 chr10 78672887 78673502 -61643263 - L1MC/D LINE L1 -3316 2830 2173 1288 196 40 63 chr10 78673868 78674266 -61642499 + MLT2C1 LTR ERVL 1 389 -8 794 161 0 32 chr10 78674615 78674739 -61642026 - FLAM_A SINE Alu -13 120 1 22 35 0 0 chr10 78674741 78674770 -61641995 + AT_rich Low_complexity Low_complexity 1 29 0 290 262 52 86 chr10 78675109 78675319 -61641446 - HAL1b LINE L1 -457 891 689 498 329 22 40 chr10 78675330 78675406 -61641359 + MER115 DNA AcHobo 12 88 -605 1553 192 29 60 chr10 78675406 78675552 -61641213 + MLT1A2 LTR MaLR 1 150 -224 2374 91 0 3 chr10 78675552 78675859 -61640906 - AluY SINE Alu -5 306 1 1553 192 29 60 chr10 78675859 78676098 -61640667 + MLT1A2 LTR MaLR 150 374 0 498 329 22 40 chr10 78676098 78676246 -61640519 + MER115 DNA AcHobo 88 232 -461 390 295 64 23 chr10 78676314 78676587 -61640178 + L1MCa LINE L1 1549 2021 -4586 259 268 66 48 chr10 78676762 78677034 -61639731 + L1MCa LINE L1 2234 2510 -4097 * 10001 38 1 0 chr10 78677031 78678315 -61638450 - L1PA5 LINE L1 -828 5318 4034 6876 42 0 11 chr10 78678315 78679155 -61637610 + L1PA5 LINE L1 5311 6152 -2 265 300 136 19 chr10 78679160 78679520 -61637245 + L1MCa LINE L1 2467 2868 -3558 1016 186 16 5 chr10 78679600 78679793 -61636972 - MER20 DNA MER1_type 0 219 25 362 207 73 18 chr10 78679880 78680044 -61636721 + L1MCa LINE L1 3141 3313 -3113 1454 274 11 0 chr10 78680637 78681090 -61635675 + L1M4 LINE L1 5254 5711 -473 469 271 86 13 chr10 78681134 78681448 -61635317 + L1MCa LINE L1 3507 3843 -2583 376 329 44 13 chr10 78681534 78681692 -61635073 - L1M4 LINE L1 -2304 3842 3680 480 290 35 29 chr10 78681692 78682002 -61634763 + L1MCa LINE L1 3816 4127 -2299 912 272 78 11 chr10 78682004 78682545 -61634220 + L1MCa LINE L1 4247 4823 -1603 929 253 69 15 chr10 78682663 78683248 -61633517 + L1MEc LINE L1 1764 2277 -3938 * 3769 104 18 8 chr10 78683242 78683850 -61632915 + L1MA3 LINE L1 5532 6145 -160 * 39865 62 3 5 chr10 78683849 78689811 -61626954 + L1PA5 LINE L1 1 5947 -207 41 21 0 0 chr10 78689960 78690008 -61626757 + AT_rich Low_complexity Low_complexity 1 48 0 1002 126 25 20 chr10 78690025 78690223 -61626542 + L1PB4 LINE L1 5259 5457 -846 198 118 0 0 chr10 78690240 78690274 -61626491 + (CA)n Simple_repeat Simple_repeat 2 35 0 1971 142 31 6 chr10 78690274 78690626 -61626139 + L1PB4 LINE L1 5793 6153 -3 2508 119 6 0 chr10 78690855 78691217 -61625548 - THE1B LTR MaLR 0 364 1 9776 98 33 89 chr10 78691217 78692891 -61623874 - THE1B-int LTR MaLR 0 1580 1 2483 116 28 0 chr10 78692891 78693245 -61623520 - THE1B LTR MaLR 0 364 1 533 336 72 25 chr10 78693492 78693730 -61623035 - L2 LINE L2 -486 2828 2566 805 257 87 0 chr10 78693730 78693936 -61622829 - MER58A DNA MER1_type 0 224 1 533 336 72 25 chr10 78693936 78694057 -61622708 - L2 LINE L2 -748 2566 2452 584 298 60 13 chr10 78694116 78694351 -61622414 + LTR67 LTR ERVL 2 247 -310 523 362 9 9 chr10 78694495 78694719 -61622046 + L2 LINE L2 3090 3313 0 211 364 0 0 chr10 78698065 78698131 -61618634 + MIR SINE MIR 64 129 -133 255 229 16 16 chr10 78698175 78698236 -61618529 - L2 LINE L2 -63 3250 3190 447 0 15 31 chr10 78699088 78699153 -61617612 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 315 0 0 0 chr10 78699159 78699194 -61617571 + (TG)n Simple_repeat Simple_repeat 1 35 0 258 261 43 0 chr10 78699567 78699636 -61617129 - MIR3 SINE MIR -45 163 92 505 323 94 49 chr10 78699691 78700097 -61616668 + L2 LINE L2 2890 3313 0 189 158 53 0 chr10 78700337 78700375 -61616390 - MIR SINE MIR -119 143 104 271 100 0 0 chr10 78700921 78700961 -61615804 - MLT2F LTR ERVL -4 659 620 997 312 88 12 chr10 78700988 78701479 -61615286 - MLT2F LTR ERVL -135 528 1 2263 86 10 0 chr10 78702063 78702365 -61614400 - AluY SINE Alu -6 305 1 261 119 0 0 chr10 78703682 78703724 -61613041 + (TTCTCC)n Simple_repeat Simple_repeat 3 44 0 394 339 85 6 chr10 78705020 78705185 -61611580 + MIR SINE MIR 14 191 -71 306 279 81 29 chr10 78705670 78705806 -61610959 + MIR SINE MIR 23 165 -97 240 310 49 98 chr10 78706629 78706813 -61609952 + MIR SINE MIR 12 186 -76 204 294 73 15 chr10 78706913 78706981 -61609784 - MIR SINE MIR -168 94 23 201 94 0 0 chr10 78707336 78707368 -61609397 + (TG)n Simple_repeat Simple_repeat 2 33 0 392 307 8 8 chr10 78707531 78707658 -61609107 + L2 LINE L2 3187 3313 0 308 169 12 96 chr10 78708030 78708113 -61608652 - L3 LINE CR1 -865 712 637 190 333 16 16 chr10 78709192 78709255 -61607510 + L2 LINE L2 3246 3308 -5 413 325 110 0 chr10 78710087 78710241 -61606524 + MIR3 SINE MIR 33 203 -5 732 208 0 0 chr10 78710562 78710692 -61606073 + AluJo/FLAM SINE Alu 3 132 -180 1540 180 7 11 chr10 78710695 78710978 -61605787 + AluJo SINE Alu 1 282 -30 1053 153 17 3 chr10 78711009 78711311 -61605454 + (TA)n Simple_repeat Simple_repeat 1 306 0 21 0 0 0 chr10 78711313 78711334 -61605431 + AT_rich Low_complexity Low_complexity 1 21 0 352 290 169 6 chr10 78712190 78712373 -61604392 - MIR SINE MIR -36 226 14 198 0 0 0 chr10 78713237 78713259 -61603506 + (A)n Simple_repeat Simple_repeat 1 22 0 230 264 42 28 chr10 78714706 78714778 -61601987 + MIR SINE MIR 69 141 -121 255 344 75 25 chr10 78716345 78716505 -61600260 - L2 LINE L2 -5 3267 3100 215 122 0 24 chr10 78718585 78718626 -61598139 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 412 216 152 46 chr10 78718940 78719116 -61597649 + MIR SINE MIR 11 186 -63 22 0 0 0 chr10 78719616 78719638 -61597127 + AT_rich Low_complexity Low_complexity 1 22 0 301 320 65 35 chr10 78720462 78720552 -61596213 + MIR SINE MIR 49 135 -127 2159 135 119 8 chr10 78720552 78720937 -61595828 + MSTA LTR MaLR 1 428 0 301 320 65 35 chr10 78720937 78721046 -61595719 + MIR SINE MIR 135 254 -8 22 0 0 0 chr10 78723549 78723571 -61593194 + AT_rich Low_complexity Low_complexity 1 22 0 214 146 24 0 chr10 78723944 78723985 -61592780 + MIR SINE MIR 113 154 -108 214 283 106 26 chr10 78724004 78724117 -61592648 + MIR SINE MIR 139 260 -2 246 275 0 0 chr10 78724138 78724229 -61592536 + (CTA)n Simple_repeat Simple_repeat 3 93 0 3678 188 31 11 chr10 78724476 78725305 -61591460 - L1MB5 LINE L1 0 6174 5329 1180 204 111 28 chr10 78725296 78725649 -61591116 - MLT-int LTR MaLR -1336 399 18 * 674 157 149 8 chr10 78725665 78725799 -61590966 + MSTA LTR MaLR 242 394 -34 13193 221 17 8 chr10 78725811 78730113 -61586652 + L1PA16 LINE L1 1811 6151 -15 243 233 27 0 chr10 78730451 78730524 -61586241 + (TA)n Simple_repeat Simple_repeat 1 75 0 232 211 18 0 chr10 78730718 78730775 -61585990 + (TAA)n Simple_repeat Simple_repeat 3 60 0 829 159 0 0 chr10 78730981 78731107 -61585658 - FLAM_C SINE Alu -17 126 1 329 281 49 88 chr10 78731122 78731385 -61585380 + L1ME3 LINE L1 2157 2409 -3987 268 235 10 0 chr10 78731402 78731500 -61585265 + L1MC5 LINE L1 7827 7925 -36 1649 209 0 7 chr10 78731507 78731808 -61584957 + AluJo SINE Alu 1 299 -13 1417 291 121 45 chr10 78731834 78732601 -61584164 + L1ME3 LINE L1 2364 3071 -3144 5372 13 0 0 chr10 78732601 78733247 -61583518 + L1PA3 LINE L1 5536 6181 0 1417 291 121 45 chr10 78733247 78734944 -61581821 + L1ME3 LINE L1 3071 5058 -1157 183 80 0 0 chr10 78734944 78734969 -61581796 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1417 291 121 45 chr10 78734969 78735231 -61581534 + L1ME3 LINE L1 5058 5299 -916 4058 190 64 30 chr10 78735352 78737203 -61579562 + L1MB2 LINE L1 4251 6164 -7 353 278 88 10 chr10 78737203 78737408 -61579357 + L1ME3 LINE L1 5384 5604 -629 676 306 39 16 chr10 78737909 78738291 -61578474 + L1ME3 LINE L1 5630 6020 -211 184 179 0 36 chr10 78738303 78738359 -61578406 + (TA)n Simple_repeat Simple_repeat 2 55 0 2264 123 0 0 chr10 78738603 78738913 -61577852 - AluSg SINE Alu 0 310 1 464 371 19 0 chr10 78739727 78739886 -61576879 + MIR3 SINE MIR 19 180 -28 198 0 0 0 chr10 78739890 78739912 -61576853 + (A)n Simple_repeat Simple_repeat 1 22 0 300 314 24 38 chr10 78739950 78740096 -61576669 - MIR3 SINE MIR -10 198 54 762 291 109 59 chr10 78740767 78741262 -61575503 - MLT1H LTR MaLR 0 549 30 338 396 14 14 chr10 78742391 78742530 -61574235 + L2 LINE L2 3133 3271 -1 3367 140 14 59 chr10 78743550 78744191 -61572574 - LTR9 LTR ERV1 0 612 1 836 238 99 14 chr10 78744272 78744495 -61572270 + MIR SINE MIR 21 262 0 200 311 41 25 chr10 78744644 78744766 -61571999 + L3 LINE CR1 1106 1229 -348 189 185 37 56 chr10 78744860 78744914 -61571851 + L2 LINE L2 3220 3272 0 448 289 35 35 chr10 78745060 78745257 -61571508 + MIR SINE MIR 8 204 -58 239 290 16 0 chr10 78745558 78745620 -61571145 - tRNA-Ile-ATT tRNA tRNA -14 63 1 2307 106 0 31 chr10 78745776 78746098 -61570667 + AluSx SINE Alu 1 312 0 199 362 31 94 chr10 78748579 78748803 -61567962 - L2 LINE L2 -69 3203 2994 438 314 68 14 chr10 78749140 78749347 -61567418 + MIR SINE MIR 18 235 -27 1210 223 93 20 chr10 78752559 78752913 -61563852 + MLT1B LTR MaLR 11 390 0 619 270 79 33 chr10 78753843 78754058 -61562707 - MIR SINE MIR -6 256 32 1713 176 248 2 chr10 78754557 78754965 -61561800 + MLT2B3 LTR ERVL 1 508 -46 601 56 47 9 chr10 78754966 78755073 -61561692 + (TCTA)n Simple_repeat Simple_repeat 3 113 0 251 24 71 0 chr10 78755073 78755115 -61561650 + MADE1 DNA Mariner 3 47 -33 * 322 171 71 0 chr10 78755109 78755179 -61561586 - MADE1 DNA Mariner -5 75 1 304 84 35 0 chr10 78755186 78755244 -61561521 + MLT2B3 LTR ERVL 463 554 0 505 293 60 46 chr10 78755289 78755515 -61561250 + MIR SINE MIR 23 262 0 363 373 42 0 chr10 78755798 78755940 -61560825 - MIR3 SINE MIR -60 148 1 660 292 59 25 chr10 78756250 78756486 -61560279 + MIR SINE MIR 1 244 -18 349 342 18 9 chr10 78757316 78757430 -61559335 + L2 LINE L2 3154 3268 -4 274 219 62 0 chr10 78757488 78757552 -61559213 + MIR SINE MIR 88 155 -107 231 203 250 0 chr10 78757578 78757642 -61559123 - MIR SINE MIR -154 108 29 372 316 26 8 chr10 78757954 78758071 -61558694 + L2 LINE L2 3154 3272 0 483 239 0 18 chr10 78758995 78759108 -61557657 + L2 LINE L2 3203 3313 0 201 286 20 61 chr10 78759155 78759253 -61557512 + L2 LINE L2 2954 3047 -225 1128 124 35 0 chr10 78759258 78759460 -61557305 - L1MA4 LINE L1 -11 6289 6081 2336 59 0 33 chr10 78759645 78759973 -61556792 - AluY SINE Alu 0 311 1 848 278 35 12 chr10 78760062 78760317 -61556448 + MIR SINE MIR 2 262 0 367 134 134 0 chr10 78760378 78760445 -61556320 + AluJ/FLAM SINE Alu 1 76 -226 781 271 128 36 chr10 78760890 78761336 -61555429 - MLT1G1 LTR MaLR 0 595 109 2361 62 6 50 chr10 78762699 78763038 -61553727 - L1PA6 LINE L1 -1 6153 5830 6251 50 143 50 chr10 78763038 78764108 -61552657 - MER11A LTR ERVK 0 1266 1 439 85 0 0 chr10 78764108 78764167 -61552598 - L1PA6 LINE L1 -319 5835 5777 * 3313 33 0 3 chr10 78764162 78764624 -61552141 + L1P2 LINE L1 5207 5667 -487 336 202 131 10 chr10 78765199 78765298 -61551467 + MER103 DNA DNA 12 122 -44 749 281 49 18 chr10 78765545 78765769 -61550996 - MIR SINE MIR -30 232 2 2594 225 14 70 chr10 78766047 78767039 -61549726 + L1M4 LINE L1 3015 3951 -2195 3693 215 105 32 chr10 78767040 78769015 -61547750 - L1MCc LINE L1 -3212 3729 1611 1177 157 9 14 chr10 78769386 78769596 -61547169 - MER3 DNA MER1_type 0 209 1 435 265 65 73 chr10 78770296 78770541 -61546224 - MIR SINE MIR -6 256 14 207 0 0 0 chr10 78770670 78770693 -61546072 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 371 396 14 22 chr10 78770786 78770925 -61545840 - L2 LINE L2 -48 3224 3087 1134 227 63 30 chr10 78770954 78771285 -61545480 + MER97c DNA MER1_type? 12 353 -737 651 236 88 41 chr10 78771317 78771660 -61545105 + MER97a DNA MER1_type? 535 893 -1 2719 231 76 15 chr10 78772035 78772954 -61543811 - L1MC4a LINE L1 -4 7804 6830 1280 243 39 53 chr10 78773038 78773801 -61542964 - L1MCc LINE L1 -4897 1526 981 385 302 30 64 chr10 78773832 78774067 -61542698 - L1 LINE L1 -3013 3133 2907 20788 161 28 16 chr10 78774498 78777165 -61539600 + L1M1 LINE L1 16 2649 -4916 180 111 0 0 chr10 78777165 78777192 -61539573 + (TA)n Simple_repeat Simple_repeat 1 27 0 20788 161 28 16 chr10 78777192 78777849 -61538916 + L1M1 LINE L1 2649 3297 -4268 8663 32 0 33 chr10 78777849 78779685 -61537080 + L1PA3 LINE L1 4351 6155 0 20788 161 28 16 chr10 78779685 78782877 -61533888 + L1M1 LINE L1 3297 6612 -953 13157 208 24 7 chr10 78782859 78788718 -61528047 + L1P5 LINE L1 35 6261 -606 * 183 42 0 0 chr10 78789049 78789073 -61527692 + (TTG)n Simple_repeat Simple_repeat 3 26 0 186 245 47 132 chr10 78789182 78789288 -61527477 - MIR SINE MIR -59 149 53 218 326 62 7 chr10 78789370 78789514 -61527251 + MIR SINE MIR 100 251 -11 2323 97 10 10 chr10 78789704 78790012 -61526753 + AluSc SINE Alu 1 308 -1 249 346 8 16 chr10 78790143 78790270 -61526495 - L3 LINE CR1 -143 1434 1309 454 279 93 14 chr10 78791518 78791658 -61525107 - MIR SINE MIR -106 156 6 290 323 0 0 chr10 78791664 78791760 -61525005 + L2 LINE L2 710 805 -2509 3096 181 34 27 chr10 78791859 78792590 -61524175 - L1MA9 LINE L1 -38 6274 5539 427 295 0 9 chr10 78792966 78793078 -61523687 + MER5B DNA MER1_type 8 118 -60 331 226 0 75 chr10 78793079 78793172 -61523593 - L1MC4 LINE L1 -1343 6699 6614 2147 107 0 0 chr10 78793172 78793476 -61523289 - AluSc SINE Alu 0 304 1 274 246 0 31 chr10 78793478 78793543 -61523222 + MER5B DNA MER1_type 116 178 0 274 351 36 48 chr10 78793572 78793740 -61523025 - MER5A DNA MER1_type -7 182 17 332 366 139 8 chr10 78794072 78794468 -61522297 + L2 LINE L2 2018 2465 -849 219 69 0 0 chr10 78795727 78795756 -61521009 + (TC)n Simple_repeat Simple_repeat 2 30 0 435 248 17 8 chr10 78796501 78796618 -61520147 + HsTC2 DNA Tc2 4 121 -1777 339 25 0 0 chr10 78796658 78796698 -61520067 + (A)n Simple_repeat Simple_repeat 1 40 0 250 275 14 0 chr10 78797205 78797274 -61519491 - MIR SINE MIR -90 172 103 200 305 48 57 chr10 78797276 78797381 -61519384 - MIR SINE MIR -75 187 84 2474 93 0 0 chr10 78797679 78797990 -61518775 - AluY SINE Alu 0 311 1 612 270 30 51 chr10 78798403 78798699 -61518066 + MLT1K LTR MaLR 199 488 -100 2359 141 35 33 chr10 78798905 78799259 -61517506 + MSTA LTR MaLR 1 358 -70 1934 137 17 3 chr10 78799259 78799551 -61517214 - AluY SINE Alu -15 296 1 2359 141 35 33 chr10 78799551 78799623 -61517142 + MSTA LTR MaLR 358 428 0 253 281 9 26 chr10 78799732 78799846 -61516919 + (TATG)n Simple_repeat Simple_repeat 3 114 0 2268 86 3 0 chr10 78800214 78800506 -61516259 + AluY SINE Alu 1 293 -18 348 286 0 24 chr10 78802705 78802789 -61513976 + MER5A DNA MER1_type 1 82 -107 245 204 0 0 chr10 78802953 78803002 -61513763 + L2 LINE L2 3265 3313 0 523 292 76 38 chr10 78803023 78803092 -61513673 + MIR SINE MIR 2 67 -195 2435 115 21 16 chr10 78803092 78803465 -61513300 + THE1C LTR MaLR 1 375 0 523 292 76 38 chr10 78803465 78803631 -61513134 + MIR SINE MIR 67 246 -16 285 340 17 23 chr10 78803880 78804063 -61512702 + CT-rich Low_complexity Low_complexity 1 181 0 315 265 74 49 chr10 78804466 78804628 -61512137 + L3 LINE CR1 1407 1572 -5 2128 99 20 3 chr10 78805035 78805337 -61511428 - AluSx SINE Alu -5 307 1 251 285 123 15 chr10 78806882 78807012 -61509753 - MIR SINE MIR -14 248 105 185 324 152 9 chr10 78807013 78807118 -61509647 - MIR SINE MIR -62 146 27 259 279 15 0 chr10 78807216 78807284 -61509481 + MIR3 SINE MIR 97 165 -43 241 260 0 39 chr10 78807523 78807627 -61509138 + (CATATA)n Simple_repeat Simple_repeat 2 101 0 216 97 0 0 chr10 78808055 78808086 -61508679 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr10 78808187 78808211 -61508554 + AT_rich Low_complexity Low_complexity 1 24 0 220 201 28 0 chr10 78808558 78808616 -61508149 + MIR SINE MIR 93 134 -74 838 101 0 0 chr10 78810099 78810228 -61506537 + L1MA7 LINE L1 6155 6283 -8 23 54 0 0 chr10 78812510 78812547 -61504218 + AT_rich Low_complexity Low_complexity 1 37 0 1736 199 0 3 chr10 78814276 78814578 -61502187 - AluJo SINE Alu -11 301 1 2121 243 125 33 chr10 78814761 78815675 -61501090 - L1ME1 LINE L1 -130 6036 5208 1485 55 221 59 chr10 78815675 78815928 -61500837 + AluY SINE Alu 1 294 -7 2346 78 0 31 chr10 78815933 78816254 -61500511 + AluY SINE Alu 1 311 0 2121 243 125 33 chr10 78816254 78816917 -61499848 - L1ME1 LINE L1 -961 5205 4605 1927 118 29 11 chr10 78816917 78817221 -61499544 - AluSx SINE Alu 0 309 1 2121 243 125 33 chr10 78817221 78817529 -61499236 - L1ME1 LINE L1 -1561 4605 3974 1901 232 61 77 chr10 78817533 78818348 -61498417 + L1M4 LINE L1 4475 5276 -870 366 252 44 73 chr10 78818446 78818652 -61498113 + L1MEc LINE L1 1257 1456 -4940 885 280 64 10 chr10 78818746 78819042 -61497723 + LTR16C LTR ERVL 170 481 -10 771 222 0 12 chr10 78819082 78819253 -61497512 + L1PB4 LINE L1 5985 6153 -3 4367 154 1 4 chr10 78820140 78820936 -61495829 + L1PB4 LINE L1 5372 6165 0 1076 279 18 62 chr10 78821241 78821742 -61495023 + L1MD3 LINE L1 1 479 -5566 27 29 0 0 chr10 78821890 78821924 -61494841 + AT_rich Low_complexity Low_complexity 1 34 0 7686 235 92 44 chr10 78821965 78827135 -61489630 + L1MD3 LINE L1 554 6211 -2202 2712 155 32 28 chr10 78827135 78827663 -61489102 - L1MB3 LINE L1 -1 6182 5653 7686 235 92 44 chr10 78827663 78829863 -61486902 + L1MD3 LINE L1 6211 8305 -108 201 338 29 0 chr10 78830441 78830509 -61486256 - MIR SINE MIR -73 135 66 21 0 0 0 chr10 78831331 78831352 -61485413 + AT_rich Low_complexity Low_complexity 1 21 0 254 353 52 11 chr10 78831374 78831511 -61485254 + MIR SINE MIR 7 146 -62 496 286 6 12 chr10 78831624 78831785 -61484980 - MLT1K LTR MaLR -17 571 412 1803 77 0 30 chr10 78831979 78832214 -61484551 - AluSg/x SINE Alu 0 310 83 922 323 68 26 chr10 78832217 78832969 -61483796 + L2 LINE L2 2469 3270 -2 592 333 112 21 chr10 78833755 78834176 -61482589 - L3 LINE CR1 -975 602 144 232 280 85 8 chr10 78834865 78834983 -61481782 - L1ME LINE L1 -429 5692 5566 557 302 29 43 chr10 78835238 78835516 -61481249 + MER110 LTR ERV1 166 439 -52 204 214 0 24 chr10 78835853 78835895 -61480870 + GA-rich Low_complexity Low_complexity 4 44 0 200 237 21 21 chr10 78835910 78836007 -61480758 + GA-rich Low_complexity Low_complexity 3 99 0 384 314 41 6 chr10 78836175 78836347 -61480418 - L1ME LINE L1 -553 5568 5391 665 305 90 55 chr10 78836364 78836666 -61480099 - L1ME LINE L1 -776 5370 5080 2188 122 0 0 chr10 78836666 78836961 -61479804 - AluSp SINE Alu -18 295 1 665 305 90 55 chr10 78836961 78837281 -61479484 - L1ME LINE L1 -1066 5080 4726 2288 91 0 10 chr10 78837986 78838295 -61478470 - AluSx SINE Alu -6 306 1 2660 219 71 19 chr10 78839123 78839911 -61476854 + L1ME2 LINE L1 5324 6152 -12 21 57 0 0 chr10 78839937 78839972 -61476793 + AT_rich Low_complexity Low_complexity 1 35 0 1636 182 30 3 chr10 78840024 78840320 -61476445 - AluJb SINE Alu -8 304 1 771 284 40 16 chr10 78841344 78841594 -61475171 + MIR SINE MIR 3 258 -4 384 304 74 0 chr10 78841852 78842000 -61474765 + MIR SINE MIR 92 250 -12 185 156 0 22 chr10 78842020 78842065 -61474700 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 6087 154 43 14 chr10 78842258 78842487 -61474278 + Tigger3b DNA MER2_type 2 223 -2805 1207 161 169 8 chr10 78842487 78842735 -61474030 - AluSx SINE Alu -11 291 4 6087 154 43 14 chr10 78842735 78843681 -61473084 + Tigger3b DNA MER2_type 223 1212 -19 552 100 0 0 chr10 78843687 78843767 -61472998 + (TA)n Simple_repeat Simple_repeat 1 80 0 297 250 58 8 chr10 78844216 78844336 -61472429 - MER103 DNA DNA 0 166 41 1913 146 9 12 chr10 78845380 78845722 -61471043 - L1MB3 LINE L1 -3 6180 5840 1215 206 118 66 chr10 78845954 78846484 -61470281 + MLT1D LTR MaLR 44 505 0 392 370 7 0 chr10 78846668 78846822 -61469943 - L2 LINE L2 -3 3310 3156 1662 197 112 95 chr10 78846883 78847649 -61469116 - LTR1B LTR ERV1 -37 983 1 445 287 185 43 chr10 78847664 78848277 -61468488 - L2 LINE L2 -174 3139 2432 1095 232 17 4 chr10 78848770 78849007 -61467758 - MIR SINE MIR -5 257 18 717 163 8 0 chr10 78849798 78849921 -61466844 + MLT1B LTR MaLR 1 124 -266 980 154 0 0 chr10 78849973 78850135 -61466630 + MLT1B LTR MaLR 228 389 -1 22 70 0 0 chr10 78850181 78850224 -61466541 + AT_rich Low_complexity Low_complexity 1 43 0 241 228 22 87 chr10 78850224 78850316 -61466449 - MIR SINE MIR -102 106 21 222 289 0 0 chr10 78850494 78850546 -61466219 + (TG)n Simple_repeat Simple_repeat 1 52 0 886 187 81 0 chr10 78853065 78853263 -61463502 - MLT1D LTR MaLR -1 504 291 705 214 15 68 chr10 78853302 78853508 -61463257 - MLT1D LTR MaLR -310 195 1 243 241 103 35 chr10 78853513 78853629 -61463136 + L3 LINE CR1 1444 1567 -10 243 309 15 0 chr10 78853635 78853703 -61463062 + MIR SINE MIR 86 154 -108 379 295 40 40 chr10 78853716 78853889 -61462876 - L1ME4a LINE L1 -294 5827 5655 4671 153 1 0 chr10 78854264 78855095 -61461670 + L1P LINE L1 4238 5069 -1077 196 389 0 0 chr10 78855096 78855168 -61461597 - MIR SINE MIR -78 130 59 903 233 121 45 chr10 78855494 78856007 -61460758 + MLT1E LTR MaLR 15 593 0 454 230 0 0 chr10 78857088 78857175 -61459590 - MIR3 SINE MIR -6 202 116 428 275 44 76 chr10 78857346 78857613 -61459152 + MIR SINE MIR 2 262 0 190 260 143 0 chr10 78857635 78857712 -61459053 + MIR SINE MIR 60 147 -61 1923 75 71 0 chr10 78860663 78860929 -61455836 - L1PA7 LINE L1 -3 6151 5867 6196 82 11 1 chr10 78861409 78863191 -61453574 - L1PA10 LINE L1 0 6168 4394 1754 165 42 0 chr10 78863224 78863558 -61453207 + MLT1B LTR MaLR 38 385 -5 315 0 0 0 chr10 78863558 78863593 -61453172 + (CA)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 78863780 78863804 -61452961 + AT_rich Low_complexity Low_complexity 1 24 0 885 261 30 57 chr10 78863932 78864303 -61452462 + LTR45 LTR ERV1 159 519 -6 451 311 76 29 chr10 78864647 78865027 -61451738 - L1ME LINE L1 -1769 4875 4478 1422 186 33 25 chr10 78865027 78865338 -61451427 - AluJo SINE Alu 0 318 6 359 320 33 0 chr10 78865395 78865517 -61451248 - L1ME LINE L1 -2202 4442 4317 51 79 0 0 chr10 78865537 78865651 -61451114 + AT_rich Low_complexity Low_complexity 1 114 0 857 300 104 65 chr10 78865837 78866835 -61449930 - L1ME LINE L1 -2370 4274 3238 339 259 42 35 chr10 78867054 78867197 -61449568 + L1MDa LINE L1 2435 2578 -3962 334 321 69 13 chr10 78867294 78867453 -61449312 + L1MDa LINE L1 2694 2861 -3679 1684 186 84 51 chr10 78867653 78868142 -61448623 + MLT1D LTR MaLR 1 505 0 307 303 85 24 chr10 78868636 78868801 -61447964 - L1ME4a LINE L1 -255 5866 5692 284 297 68 0 chr10 78868877 78869025 -61447740 - L1ME LINE L1 -4641 2184 2027 496 269 49 77 chr10 78869061 78869880 -61446885 - L1ME LINE L1 -4758 1886 1078 491 316 22 40 chr10 78870374 78870652 -61446113 - L1ME LINE L1 -6012 813 541 307 313 40 23 chr10 78870707 78870883 -61445882 - L1ME LINE L1 -5183 887 709 1418 261 48 21 chr10 78870941 78871523 -61445242 - L1ME3 LINE L1 0 6162 5565 302 263 105 38 chr10 78871638 78871771 -61444994 - L1ME3 LINE L1 -640 5524 5383 253 183 63 8 chr10 78871790 78871916 -61444849 + (TA)n Simple_repeat Simple_repeat 1 133 0 1850 226 57 13 chr10 78873427 78873904 -61442861 + MLT1D LTR MaLR 8 505 0 465 258 62 62 chr10 78874131 78874325 -61442440 + MIR SINE MIR 55 248 -14 225 0 0 0 chr10 78875049 78875074 -61441691 + (CA)n Simple_repeat Simple_repeat 1 25 0 2818 13 0 3 chr10 78875169 78875482 -61441283 + AluYb8 SINE Alu 1 312 -6 1538 233 77 53 chr10 78875568 78876153 -61440612 - L1MC4 LINE L1 -425 7617 7019 464 250 32 51 chr10 78876280 78876496 -61440269 - L1ME3 LINE L1 -1150 4996 4785 233 109 0 0 chr10 78876611 78876657 -61440108 + LTR66 LTR ERVL 394 439 -171 387 245 0 47 chr10 78876665 78876771 -61439994 + L1MC4 LINE L1 6614 6714 -1328 486 290 48 24 chr10 78876784 78877160 -61439605 - L1ME3 LINE L1 -1487 4659 4275 276 293 73 0 chr10 78877196 78877319 -61439446 - L1ME3 LINE L1 -1948 4198 4067 468 304 39 72 chr10 78877507 78878103 -61438662 - L1ME3 LINE L1 -2201 3945 3370 341 277 130 17 chr10 78878112 78878289 -61438476 - L1ME3 LINE L1 -2874 3272 3076 294 29 0 0 chr10 78878556 78878591 -61438174 + (TG)n Simple_repeat Simple_repeat 2 36 0 347 326 77 63 chr10 78878591 78878638 -61438127 - L1ME3 LINE L1 -3435 2711 2666 2013 194 44 13 chr10 78878638 78879091 -61437674 - MLT1C LTR MaLR 0 467 1 347 326 77 63 chr10 78879091 78879611 -61437154 - L1ME3 LINE L1 -3480 2666 2137 209 277 12 0 chr10 78879638 78879721 -61437044 + T-rich Low_complexity Low_complexity 2 85 0 201 354 8 54 chr10 78880195 78880325 -61436440 + L2 LINE L2 923 1046 -2268 280 186 17 0 chr10 78880332 78880391 -61436374 - Charlie8 DNA MER1_type -995 1422 1363 261 379 70 12 chr10 78880534 78880777 -61435988 + L2 LINE L2 1079 1335 -1979 374 331 19 19 chr10 78880930 78881084 -61435681 + L2 LINE L2 3160 3313 0 764 217 7 0 chr10 78881161 78881304 -61435461 - MER58B DNA MER1_type -1 340 197 836 251 37 9 chr10 78881457 78881672 -61435093 + MIR SINE MIR 21 241 -21 181 286 54 0 chr10 78881638 78881694 -61435071 + L2 LINE L2 3251 3309 -4 * 282 338 62 41 chr10 78881710 78881855 -61434910 - MIR SINE MIR -48 214 67 2513 208 35 9 chr10 78881973 78882517 -61434248 + MLT1G LTR MaLR 10 567 -23 297 322 84 16 chr10 78882659 78882824 -61433941 + MIR SINE MIR 44 212 -50 342 0 0 0 chr10 78882997 78883035 -61433730 + (TG)n Simple_repeat Simple_repeat 2 39 0 398 287 0 0 chr10 78884430 78884531 -61432234 + L2 LINE L2 3180 3280 -33 234 237 0 0 chr10 78884534 78884610 -61432155 + GA-rich Low_complexity Low_complexity 2 77 0 1039 280 19 6 chr10 78884626 78884937 -61431828 - LTR53 LTR ERVL -7 512 198 334 234 34 117 chr10 78885025 78885230 -61431535 + MLT1J LTR MaLR 112 299 -212 254 226 0 0 chr10 78885266 78885319 -61431446 + HAL1 LINE L1 1647 1699 -808 226 259 7 43 chr10 78885334 78885473 -61431292 - L1ME LINE L1 -238 5883 5750 14324 50 4 78 chr10 78885850 78888027 -61428738 - L1P LINE L1 -4120 2026 12 7137 45 0 8 chr10 78888027 78889476 -61427289 + L1PA4 LINE L1 4728 6170 0 1544 68 34 13 chr10 78889812 78890048 -61426717 - L1P3 LINE L1 -622 5532 5292 469 0 0 0 chr10 78890047 78890101 -61426664 + L1P3 LINE L1 5595 5648 -506 * 1938 126 80 57 chr10 78890108 78890546 -61426219 + LTR7 LTR ERV1 1 448 -2 3761 101 17 29 chr10 78890598 78891288 -61425477 + HERVH LTR ERV1 1 620 -7093 16034 95 10 24 chr10 78891289 78893882 -61422883 + HERVH LTR ERV1 437 2995 -4718 782 128 28 0 chr10 78893861 78894002 -61422763 + HERVH LTR ERV1 3140 3284 -4429 * 881 154 0 0 chr10 78894008 78894151 -61422614 + HERVH LTR ERV1 3502 3644 -4069 2440 157 0 0 chr10 78894153 78894560 -61422205 + HERVH LTR ERV1 4743 5149 -2564 234 0 0 0 chr10 78894577 78894603 -61422162 + (A)n Simple_repeat Simple_repeat 1 26 0 1274 115 20 0 chr10 78894604 78894804 -61421961 + HERVH LTR ERV1 5616 5819 -1894 2304 87 45 16 chr10 78894804 78895183 -61421582 + HERVH LTR ERV1 7324 7713 0 2033 125 77 57 chr10 78895183 78895622 -61421143 + LTR7 LTR ERV1 1 448 -2 3608 93 6 2 chr10 78895623 78896138 -61420627 + L1PA8 LINE L1 5646 6162 -10 456 305 107 5 chr10 78897263 78897450 -61419315 - MIR SINE MIR -11 251 46 202 231 0 0 chr10 78897498 78897537 -61419228 + L2 LINE L2 3263 3301 -12 183 42 0 0 chr10 78897538 78897562 -61419203 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 217 329 26 0 chr10 78900140 78900216 -61416549 - L2 LINE L2 -218 3054 2977 2347 113 0 0 chr10 78901122 78901431 -61415334 - AluY SINE Alu -2 309 1 226 337 9 28 chr10 78902552 78902669 -61414096 - MIR SINE MIR -81 127 16 2314 188 12 0 chr10 78902875 78903291 -61413474 + MSTB LTR MaLR 6 426 0 30 0 0 0 chr10 78903484 78903514 -61413251 + AT_rich Low_complexity Low_complexity 1 30 0 811 245 0 43 chr10 78903537 78903721 -61413044 + MER5A DNA MER1_type 2 177 -12 21 0 0 0 chr10 78904369 78904390 -61412375 + AT_rich Low_complexity Low_complexity 1 21 0 6378 21 0 0 chr10 78904391 78905159 -61411606 - L1HS LINE L1 -2 6153 5386 533 251 99 42 chr10 78905954 78906145 -61410620 - MIR SINE MIR -30 232 31 192 77 0 0 chr10 78907037 78907063 -61409702 + (T)n Simple_repeat Simple_repeat 1 26 0 2401 80 0 0 chr10 78907518 78907819 -61408946 + AluY SINE Alu 1 301 -10 376 329 26 13 chr10 78908026 78908178 -61408587 + MLT1K LTR MaLR 15 168 -420 1058 118 0 0 chr10 78908559 78908720 -61408045 - HERVH LTR ERV1 -7552 161 1 2001 123 77 57 chr10 78908772 78909211 -61407554 - LTR7 LTR ERV1 -2 448 1 469 0 0 0 chr10 78909218 78909272 -61407493 - L1P3 LINE L1 -524 5648 5595 * 1544 68 34 13 chr10 78909271 78909507 -61407258 + L1P3 LINE L1 5292 5532 -622 246 32 0 0 chr10 78909843 78909874 -61406891 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 3728 77 0 0 chr10 78909874 78910368 -61406397 - L1PA4 LINE L1 -16 6139 5646 2002 128 77 57 chr10 78910369 78910808 -61405957 - LTR7 LTR ERV1 -2 448 1 2304 87 45 16 chr10 78910808 78911187 -61405578 - HERVH LTR ERV1 0 7713 7324 1274 115 20 0 chr10 78911187 78911387 -61405378 - HERVH LTR ERV1 -1894 5819 5616 216 0 0 0 chr10 78911388 78911412 -61405353 + (T)n Simple_repeat Simple_repeat 1 24 0 2255 179 0 0 chr10 78911429 78911836 -61404929 - HERVH LTR ERV1 -2564 5149 4743 639 203 14 14 chr10 78911838 78911981 -61404784 - HERVH LTR ERV1 -4069 3644 3502 782 128 28 0 chr10 78911987 78912128 -61404637 - HERVH LTR ERV1 -4429 3284 3140 * 15852 103 14 26 chr10 78912107 78915240 -61401525 - HERVH LTR ERV1 -4718 2995 24 336 64 0 0 chr10 78915494 78915541 -61401224 + (TG)n Simple_repeat Simple_repeat 1 47 0 341 298 46 7 chr10 78915791 78915942 -61400823 - L1M4 LINE L1 -1810 4336 4180 288 107 21 25 chr10 78915956 78916010 -61400755 - L1P3 LINE L1 -6087 374 10 1524 221 10 12 chr10 78916010 78916427 -61400338 + L1P LINE L1 4728 5143 -1003 24 0 0 0 chr10 78916694 78916718 -61400047 + AT_rich Low_complexity Low_complexity 1 24 0 5428 105 52 15 chr10 78916718 78917677 -61399088 + L1MA2 LINE L1 2117 3111 -4454 * 6080 152 19 4 chr10 78917672 78919312 -61397453 + L1MA2 LINE L1 6065 7723 0 467 283 64 23 chr10 78919329 78919813 -61396952 - L1M4 LINE L1 -2747 3399 2896 388 294 84 68 chr10 78919829 78920257 -61396508 - L1M4 LINE L1 -3382 2764 2330 1750 144 22 7 chr10 78920258 78920575 -61396190 - AluSx SINE Alu 0 328 8 241 111 0 0 chr10 78920736 78920772 -61395993 - U2 snRNA snRNA -152 36 1 221 0 0 33 chr10 78920995 78921025 -61395740 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1122 112 0 0 chr10 78921846 78921998 -61394767 + AluSg/x SINE Alu 156 307 -5 272 225 162 52 chr10 78922224 78922415 -61394350 + L1M4 LINE L1 3194 3405 -2741 371 255 66 45 chr10 78922520 78922705 -61394060 + L1M4c LINE L1 1600 2192 -4191 365 304 43 52 chr10 78922723 78923161 -61393604 + L1M4c LINE L1 3565 3998 -2384 1692 198 77 25 chr10 78923380 78923824 -61392941 - MLT1C LTR MaLR 0 467 1 1588 257 72 16 chr10 78924054 78924840 -61391925 - L1ME1 LINE L1 -7 6159 5312 334 311 57 35 chr10 78924845 78925073 -61391692 - L1ME1 LINE L1 -1783 4363 4131 241 207 108 9 chr10 78925205 78925316 -61391449 - L1 LINE L1 -2173 3973 3852 588 277 181 27 chr10 78925789 78926269 -61390496 - L1 LINE L1 -2699 3447 2894 340 211 0 18 chr10 78926427 78926536 -61390229 + (CATATA)n Simple_repeat Simple_repeat 3 109 0 8418 109 26 1 chr10 78926694 78927962 -61388803 + HSMAR2 DNA Mariner 2 1301 -1 3418 63 30 11 chr10 78928215 78928674 -61388091 - L1PA10 LINE L1 -3 6165 5698 23 54 0 0 chr10 78929566 78929603 -61387162 + AT_rich Low_complexity Low_complexity 1 37 0 525 331 128 22 chr10 78929935 78930301 -61386464 + MLT1L LTR MaLR 201 605 -10 588 240 80 45 chr10 78930305 78930632 -61386133 + L1MC/D LINE L1 5480 5820 -301 22 35 0 0 chr10 78930901 78930930 -61385835 + AT_rich Low_complexity Low_complexity 1 29 0 192 324 0 0 chr10 78931333 78931404 -61385361 + MIR SINE MIR 26 96 -166 902 248 18 14 chr10 78931733 78931955 -61384810 - MER58A DNA MER1_type 0 224 2 289 279 13 13 chr10 78933548 78933627 -61383138 + L2 LINE L2 3235 3313 0 180 324 113 0 chr10 78935637 78935708 -61381057 - L2 LINE L2 -25 3288 3210 198 200 0 0 chr10 78936345 78936385 -61380380 - L2 LINE L2 -3 3310 3271 1850 226 57 13 chr10 78938454 78938931 -61377834 + MLT1D LTR MaLR 8 505 0 465 258 62 62 chr10 78939158 78939352 -61377413 + MIR SINE MIR 55 248 -14 207 0 0 0 chr10 78940076 78940099 -61376666 + (CA)n Simple_repeat Simple_repeat 1 23 0 2818 13 0 3 chr10 78940194 78940507 -61376258 + AluYb8 SINE Alu 1 312 -6 1245 239 77 56 chr10 78940593 78941180 -61375585 - L1MC4 LINE L1 -425 7617 7019 464 250 32 51 chr10 78941307 78941523 -61375242 - L1M4 LINE L1 -1150 4996 4785 237 65 0 0 chr10 78941615 78941646 -61375119 + (TG)n Simple_repeat Simple_repeat 2 32 0 348 247 0 43 chr10 78941659 78941752 -61375013 - L1MC4 LINE L1 -1340 6702 6614 * 387 245 0 47 chr10 78941678 78941784 -61374981 + L1MC4 LINE L1 6614 6714 -1328 463 286 35 24 chr10 78941797 78942172 -61374593 - L1M4 LINE L1 -1487 4659 4275 276 293 73 0 chr10 78942208 78942331 -61374434 - L1M4 LINE L1 -1948 4198 4067 468 304 39 72 chr10 78942519 78943115 -61373650 - L1M4 LINE L1 -2201 3945 3370 341 277 130 17 chr10 78943124 78943301 -61373464 - L1M4 LINE L1 -2874 3272 3076 333 0 0 0 chr10 78943568 78943605 -61373160 + (TG)n Simple_repeat Simple_repeat 2 38 0 347 326 77 63 chr10 78943605 78943652 -61373113 - L1M4 LINE L1 -3435 2711 2666 2013 194 44 13 chr10 78943652 78944105 -61372660 - MLT1C LTR MaLR 0 467 1 347 326 77 63 chr10 78944105 78944625 -61372140 - L1M4 LINE L1 -3480 2666 2137 209 277 12 0 chr10 78944652 78944735 -61372030 + T-rich Low_complexity Low_complexity 2 85 0 201 354 8 54 chr10 78945209 78945339 -61371426 + L2 LINE L2 923 1046 -2268 280 186 17 0 chr10 78945346 78945405 -61371360 - Charlie8 DNA MER1_type -6 2411 2352 261 379 70 12 chr10 78945548 78945791 -61370974 + L2 LINE L2 1079 1335 -1979 374 331 19 19 chr10 78945944 78946098 -61370667 + L2 LINE L2 3160 3313 0 764 217 7 0 chr10 78946175 78946318 -61370447 - MER58B DNA MER1_type -1 340 197 836 251 37 9 chr10 78946471 78946686 -61370079 + MIR SINE MIR 21 241 -21 181 286 54 0 chr10 78946652 78946708 -61370057 + L2 LINE L2 3251 3309 -4 * 282 338 62 41 chr10 78946724 78946869 -61369896 - MIR SINE MIR -48 214 67 2513 208 35 9 chr10 78946987 78947531 -61369234 + MLT1G LTR MaLR 10 567 -23 297 322 84 16 chr10 78947673 78947838 -61368927 + MIR SINE MIR 44 212 -50 396 0 0 0 chr10 78948011 78948055 -61368710 + (TG)n Simple_repeat Simple_repeat 2 45 0 398 287 0 0 chr10 78949450 78949551 -61367214 + L2 LINE L2 3180 3280 -33 234 237 0 0 chr10 78949554 78949630 -61367135 + GA-rich Low_complexity Low_complexity 2 77 0 1039 280 19 6 chr10 78949646 78949957 -61366808 - LTR53 LTR ERVL -7 512 198 334 234 34 117 chr10 78950045 78950250 -61366515 + MLT1J LTR MaLR 112 299 -212 254 226 0 0 chr10 78950286 78950339 -61366426 + HAL1 LINE L1 1647 1699 -808 226 259 7 43 chr10 78950354 78950493 -61366272 - L1ME LINE L1 -238 5883 5750 10581 51 5 78 chr10 78950870 78953047 -61363718 - L1P LINE L1 -4120 2026 12 7657 44 0 8 chr10 78953047 78954496 -61362269 + L1PA4 LINE L1 4728 6170 0 1667 68 34 13 chr10 78954832 78955068 -61361697 - L1P3 LINE L1 -622 5532 5292 4311 81 5 22 chr10 78955068 78955128 -61361637 + L1PA8 LINE L1 5595 5655 -517 2133 132 77 57 chr10 78955128 78955567 -61361198 + LTR7 LTR ERV1 1 448 -2 4311 81 5 22 chr10 78955567 78956083 -61360682 + L1PA8 LINE L1 5655 6162 -10 448 305 107 5 chr10 78957208 78957395 -61359370 - MIR SINE MIR -11 251 46 203 231 0 0 chr10 78957443 78957482 -61359283 + L2 LINE L2 3263 3301 -12 183 42 0 0 chr10 78957483 78957507 -61359258 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 202 314 29 0 chr10 78960091 78960161 -61356604 - L2 LINE L2 -224 3048 2977 2325 116 0 0 chr10 78961064 78961374 -61355391 - AluY SINE Alu -1 310 1 218 337 9 28 chr10 78962494 78962611 -61354154 - MIR SINE MIR -81 127 16 2490 189 12 0 chr10 78962815 78963233 -61353532 + MSTB LTR MaLR 4 426 0 30 0 0 0 chr10 78963426 78963456 -61353309 + AT_rich Low_complexity Low_complexity 1 30 0 798 245 0 43 chr10 78963479 78963663 -61353102 + MER5A DNA MER1_type 2 177 -12 6816 21 0 0 chr10 78964330 78965098 -61351667 - L1HS LINE L1 -2 6153 5386 529 251 99 42 chr10 78965890 78966081 -61350684 - MIR SINE MIR -30 232 31 246 62 0 0 chr10 78966973 78967005 -61349760 + (T)n Simple_repeat Simple_repeat 1 32 0 2403 83 0 0 chr10 78967460 78967761 -61349004 + AluY SINE Alu 1 301 -10 408 326 58 12 chr10 78967968 78968140 -61348625 + MLT1K LTR MaLR 15 194 -394 183 42 0 0 chr10 78968785 78968809 -61347956 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 255 171 0 0 chr10 78968815 78968856 -61347909 + MLT1K LTR MaLR 366 406 -182 7603 43 9 9 chr10 78968869 78970177 -61346588 + L1PA6 LINE L1 4846 6154 0 2308 101 0 10 chr10 78970200 78970508 -61346257 + AluY SINE Alu 1 305 -6 1772 249 97 32 chr10 78970508 78971160 -61345605 - L1M4 LINE L1 -1819 4327 3634 552 274 91 19 chr10 78971173 78971381 -61345384 + MLT1K LTR MaLR 366 588 0 625 180 40 35 chr10 78971501 78971605 -61345160 - MER58 DNA MER1_type -1 2419 2317 1299 213 17 114 chr10 78971605 78972009 -61344756 + MLT1A1 LTR MaLR 1 365 0 625 180 40 35 chr10 78972009 78972102 -61344663 - MER58 DNA MER1_type -103 2317 19 553 338 27 20 chr10 78972630 78972926 -61343839 - L1ME3A LINE L1 -271 5899 5602 180 0 0 0 chr10 78972928 78972948 -61343817 + (T)n Simple_repeat Simple_repeat 1 20 0 943 84 15 8 chr10 78972948 78973079 -61343686 - AluY SINE Alu -179 132 1 2095 230 117 81 chr10 78973213 78973397 -61343368 - L1MC5 LINE L1 -35 7926 7750 2316 95 3 0 chr10 78973397 78973691 -61343074 + AluSp SINE Alu 1 295 -18 2095 230 117 81 chr10 78973691 78974660 -61342105 - L1MC5 LINE L1 -211 7750 6726 462 36 0 0 chr10 78974660 78974716 -61342049 + (TG)n Simple_repeat Simple_repeat 2 57 0 2095 230 117 81 chr10 78974716 78974752 -61342013 - L1MC5 LINE L1 -1235 6726 6693 414 268 61 27 chr10 78974776 78975134 -61341631 - L1P4 LINE L1 -687 5478 5106 5099 236 21 16 chr10 78975175 78976415 -61340350 + L1M4b LINE L1 -295 988 -5558 1429 212 18 26 chr10 78976554 78976992 -61339773 + L1M4b LINE L1 997 1435 -5107 304 98 0 0 chr10 78976992 78977033 -61339732 + FRAM/FAM SINE Alu 6 46 -129 5900 178 32 2 chr10 78977035 78978032 -61338733 + L1M1 LINE L1 1102 2128 -5437 3833 39 1 6 chr10 78978038 78984057 -61332708 + L1PA4 LINE L1 7 6050 -105 180 182 0 0 chr10 78985808 78985852 -61330913 + CT-rich Low_complexity Low_complexity 2 45 0 351 189 27 14 chr10 78986479 78986553 -61330212 - MIR3 SINE MIR -24 184 110 29 47 0 0 chr10 78989529 78989572 -61327193 + AT_rich Low_complexity Low_complexity 1 43 0 469 284 83 23 chr10 78993266 78993496 -61323269 + MIR SINE MIR 11 260 -2 284 289 70 47 chr10 78993563 78993691 -61323074 + MIR SINE MIR 114 244 -18 180 0 0 0 chr10 78995795 78995815 -61320950 + (T)n Simple_repeat Simple_repeat 1 20 0 259 276 17 0 chr10 78996822 78996880 -61319885 + polypurine Low_complexity Low_complexity 2 60 0 273 187 13 27 chr10 78996880 78996955 -61319810 + A-rich Low_complexity Low_complexity 2 75 0 288 155 0 0 chr10 78997264 78997335 -61319430 + (TA)n Simple_repeat Simple_repeat 2 72 0 213 226 0 0 chr10 78998895 78998948 -61317817 + A-rich Low_complexity Low_complexity 4 56 0 906 181 32 27 chr10 79000204 79000392 -61316373 + MER5A DNA MER1_type 1 189 0 330 232 116 138 chr10 79000400 79000581 -61316184 + MER5B DNA MER1_type 1 177 -1 272 216 103 17 chr10 79000724 79000840 -61315925 - MER113 DNA MER1_type? -351 170 45 2029 122 21 0 chr10 79000856 79001170 -61315595 + AluSx SINE Alu 1 320 0 197 152 0 0 chr10 79003189 79003222 -61313543 - MER5B DNA MER1_type -6 172 140 351 285 109 7 chr10 79003329 79003466 -61313299 + MIR SINE MIR 101 251 -11 281 313 61 30 chr10 79004738 79004869 -61311896 + MIR3 SINE MIR 10 144 -64 583 256 130 14 chr10 79005135 79005350 -61311415 + MIR SINE MIR 13 252 -10 1743 152 10 37 chr10 79005523 79005820 -61310945 + AluSx SINE Alu 1 289 -23 3939 197 44 20 chr10 79005825 79006967 -61309798 + L1MB8 LINE L1 4404 5565 -609 1872 199 70 32 chr10 79006984 79007426 -61309339 + LTR2B LTR ERV1 32 490 0 1838 174 3 3 chr10 79007426 79007743 -61309022 + L1MB8 LINE L1 5560 5876 -308 4197 155 45 46 chr10 79007762 79008734 -61308031 - MER11C LTR ERVK -14 1057 1 970 192 23 69 chr10 79008735 79008996 -61307769 + L1MB8 LINE L1 5913 6161 -17 333 0 0 0 chr10 79009085 79009122 -61307643 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 78 0 0 chr10 79010888 79010939 -61305826 + AT_rich Low_complexity Low_complexity 1 51 0 1095 199 9 31 chr10 79011518 79011744 -61305021 + MER58A DNA MER1_type 1 221 -3 232 291 94 0 chr10 79011839 79011956 -61304809 + L1ME LINE L1 5748 5875 -246 21 0 0 0 chr10 79012281 79012302 -61304463 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 79012542 79012565 -61304200 + AT_rich Low_complexity Low_complexity 1 23 0 475 283 129 42 chr10 79012884 79013411 -61303354 + L1ME4a LINE L1 5536 6108 -13 336 380 15 7 chr10 79014739 79014876 -61301889 + MIR SINE MIR 15 152 -110 214 205 0 0 chr10 79016078 79016117 -61300648 + (TA)n Simple_repeat Simple_repeat 2 40 0 637 240 127 23 chr10 79016969 79017190 -61299575 - MER102a DNA MER1_type -28 302 59 540 319 165 32 chr10 79017591 79017992 -61298773 + L2 LINE L2 2855 3308 -5 876 257 68 0 chr10 79018017 79018223 -61298542 - MIR SINE MIR -21 241 22 592 186 174 68 chr10 79019535 79019600 -61297165 + MER45A DNA AcHobo 1 58 -1523 1919 133 3 7 chr10 79019600 79019912 -61296853 - AluJb SINE Alu 0 311 1 592 186 174 68 chr10 79019912 79020006 -61296759 + MER45A DNA AcHobo 58 178 0 625 315 114 52 chr10 79021213 79021986 -61294779 + L2 LINE L2 2429 3246 -26 357 339 83 0 chr10 79023477 79023645 -61293120 + MIR SINE MIR 12 193 -69 265 267 35 26 chr10 79024289 79024405 -61292360 + MER103 DNA DNA 8 124 -42 603 215 172 65 chr10 79027371 79027680 -61289085 + MLT1I LTR MaLR 20 371 -38 198 0 0 0 chr10 79027680 79027702 -61289063 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 603 215 172 65 chr10 79027702 79027745 -61289020 + MLT1I LTR MaLR 371 408 -1 362 302 85 9 chr10 79027747 79027959 -61288806 + MLT1L LTR MaLR 151 378 -237 312 70 0 0 chr10 79028082 79028125 -61288640 + (CA)n Simple_repeat Simple_repeat 2 44 0 225 35 0 0 chr10 79030538 79030567 -61286198 - L1P LINE L1 -766 5388 5360 5015 107 3 21 chr10 79030567 79030966 -61285799 + L1PB1 LINE L1 5397 5777 -374 313 73 0 36 chr10 79030966 79031021 -61285744 + (CA)n Simple_repeat Simple_repeat 2 54 0 5015 107 3 21 chr10 79031021 79031369 -61285396 + L1PB1 LINE L1 5777 6130 -21 591 322 62 21 chr10 79031659 79031901 -61284864 + MIR SINE MIR 6 257 -5 351 0 0 0 chr10 79032055 79032094 -61284671 + (TG)n Simple_repeat Simple_repeat 2 40 0 288 0 0 0 chr10 79032093 79032125 -61284640 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 794 227 135 9 chr10 79032371 79032600 -61284165 - MIR SINE MIR -3 259 2 606 294 22 21 chr10 79032600 79032827 -61283938 - MIR SINE MIR -25 237 26 469 316 14 7 chr10 79034251 79034390 -61282375 - MIR3 SINE MIR -9 199 60 227 205 205 12 chr10 79034825 79034908 -61281857 + MLT1K LTR MaLR 490 588 0 223 114 45 0 chr10 79035195 79035239 -61281526 + (CAAAC)n Simple_repeat Simple_repeat 5 50 0 1233 72 0 0 chr10 79035377 79035529 -61281236 + AluY SINE Alu 158 309 -2 1767 162 17 7 chr10 79035774 79035895 -61280870 + AluJb SINE Alu 1 119 -193 225 0 0 0 chr10 79035895 79035920 -61280845 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1767 162 17 7 chr10 79035920 79036088 -61280677 + AluJb SINE Alu 119 293 -19 307 251 70 45 chr10 79036107 79036435 -61280330 + L1ME4a LINE L1 5577 5943 -178 318 265 76 8 chr10 79036439 79036571 -61280194 + L1ME4a LINE L1 5980 6120 -1 275 290 45 77 chr10 79036681 79036836 -61279929 - MIR3 SINE MIR -27 181 32 645 266 93 42 chr10 79038311 79038548 -61278217 + MIR SINE MIR 14 262 0 263 302 85 23 chr10 79038585 79038714 -61278051 + MIR3 SINE MIR 41 177 -31 253 173 200 0 chr10 79039091 79039166 -61277599 + MIR3 SINE MIR 112 201 -7 22 35 0 0 chr10 79039566 79039595 -61277170 + AT_rich Low_complexity Low_complexity 1 29 0 291 146 0 0 chr10 79040348 79040403 -61276362 + (CA)n Simple_repeat Simple_repeat 2 56 0 679 166 185 20 chr10 79041734 79041885 -61274880 - MER5B DNA MER1_type -2 176 1 6261 151 16 31 chr10 79041889 79043398 -61273367 + L1MA9 LINE L1 4819 6308 -4 600 186 0 71 chr10 79044153 79044293 -61272472 + MER91B DNA MER1_type 1 130 -60 382 304 0 20 chr10 79044310 79044412 -61272353 + MER91B DNA MER1_type 91 190 0 * 499 266 143 0 chr10 79044412 79044564 -61272201 - MIR SINE MIR -64 198 25 301 294 0 0 chr10 79045351 79045419 -61271346 - L2 LINE L2 0 3272 3205 1972 145 3 22 chr10 79046011 79046349 -61270416 - AluSx SINE Alu 0 332 1 240 119 0 0 chr10 79046362 79046404 -61270361 - Alu SINE Alu -2 301 260 531 320 44 9 chr10 79047474 79047664 -61269101 + MIR SINE MIR 11 201 -58 293 299 150 16 chr10 79049195 79049322 -61267443 - L3 LINE CR1 -129 1448 1305 188 337 34 11 chr10 79049357 79049446 -61267319 - L3 LINE CR1 -380 1197 1107 405 70 0 0 chr10 79049973 79050030 -61266735 + (TG)n Simple_repeat Simple_repeat 2 58 0 258 366 52 17 chr10 79050514 79050686 -61266079 + L2 LINE L2 2580 2757 -557 449 186 136 25 chr10 79051039 79051157 -61265608 - MER3 DNA MER1_type 0 209 79 2381 97 0 0 chr10 79051188 79051497 -61265268 - AluY SINE Alu -2 309 1 272 339 62 103 chr10 79051497 79051721 -61265044 + L2 LINE L2 3023 3237 -35 1966 115 0 0 chr10 79052785 79053038 -61263727 + AluSx SINE Alu 30 282 -30 495 162 0 0 chr10 79052964 79053038 -61263727 + AluSg/x SINE Alu 209 424 0 918 49 42 7 chr10 79053038 79053180 -61263585 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 189 0 0 0 chr10 79053179 79053200 -61263565 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 * 233 214 60 34 chr10 79053552 79053669 -61263096 + (TTAG)n Simple_repeat Simple_repeat 3 122 0 * 255 259 31 19 chr10 79053633 79053795 -61262970 + (TAG)n Simple_repeat Simple_repeat 3 166 0 291 241 9 26 chr10 79053830 79053946 -61262819 + GA-rich Low_complexity Low_complexity 3 116 0 1605 131 67 131 chr10 79054495 79054712 -61262053 - MLT1A1 LTR MaLR -1 364 181 2010 105 56 7 chr10 79054712 79054997 -61261768 - AluSx SINE Alu -13 299 1 1605 131 67 131 chr10 79054997 79055167 -61261598 - MLT1A1 LTR MaLR -184 181 2 208 283 0 0 chr10 79055713 79055773 -61260992 - MER5A DNA MER1_type -80 109 50 357 292 0 46 chr10 79056324 79056454 -61260311 - MLT2E LTR ERVL -473 155 32 214 182 30 0 chr10 79057733 79057799 -61258966 + GA-rich Low_complexity Low_complexity 2 69 0 255 244 13 13 chr10 79058350 79058428 -61258337 + L1ME LINE L1 5732 5809 -312 2137 105 0 7 chr10 79059792 79060111 -61256654 + AluSq SINE Alu 1 317 0 265 182 34 23 chr10 79060130 79060218 -61256547 + (CA)n Simple_repeat Simple_repeat 2 90 0 182 167 56 0 chr10 79060491 79060527 -61256238 - L2 LINE L2 -15 3298 3261 1903 168 0 3 chr10 79060735 79061045 -61255720 - AluJb SINE Alu -3 309 1 216 184 0 0 chr10 79061313 79061351 -61255414 + (CA)n Simple_repeat Simple_repeat 1 38 0 190 139 0 28 chr10 79062192 79062228 -61254537 - L2 LINE L2 -10 3303 3269 1493 218 46 0 chr10 79062644 79062970 -61253795 + MER58B DNA MER1_type 1 341 0 181 286 120 57 chr10 79064379 79064554 -61252211 + L2 LINE L2 2984 3169 -144 284 295 98 9 chr10 79064630 79064742 -61252023 + L2 LINE L2 3186 3307 -6 2166 112 10 3 chr10 79064978 79065281 -61251484 + AluSc SINE Alu 1 305 -4 471 271 21 14 chr10 79066108 79066248 -61250517 - MIR SINE MIR -74 188 48 336 64 0 0 chr10 79067009 79067056 -61249709 + (CA)n Simple_repeat Simple_repeat 1 47 0 262 104 42 0 chr10 79067931 79067979 -61248786 - AluSc SINE Alu 0 299 250 2492 67 0 19 chr10 79069580 79069892 -61246873 + AluY SINE Alu 1 306 -5 374 349 19 19 chr10 79070057 79070315 -61246450 + L3 LINE CR1 1208 1465 -112 1938 142 27 76 chr10 79071212 79071620 -61245145 + MLT1B LTR MaLR 3 390 0 539 270 106 21 chr10 79072079 79072316 -61244449 + MIR SINE MIR 1 257 -5 294 194 0 0 chr10 79072431 79072498 -61244267 + (CTA)n Simple_repeat Simple_repeat 3 69 0 253 254 84 28 chr10 79072557 79072699 -61244066 - MIR SINE MIR -48 214 65 1878 167 7 3 chr10 79072997 79073296 -61243469 + AluJb SINE Alu 1 300 -12 292 224 0 0 chr10 79073299 79073357 -61243408 + Tigger1 DNA MER2_type 2 59 -2359 252 0 0 0 chr10 79073358 79073386 -61243379 + (T)n Simple_repeat Simple_repeat 1 28 0 1161 110 17 0 chr10 79073398 79073571 -61243194 - Tigger1 DNA MER2_type -1202 1216 1041 * 7819 110 43 0 chr10 79073565 79074704 -61242061 + Tigger1 DNA MER2_type 1231 2418 0 248 349 58 0 chr10 79075423 79075509 -61241256 + L2 LINE L2 3133 3223 -49 886 195 22 16 chr10 79075977 79076162 -61240603 + MER5A DNA MER1_type 2 187 -2 317 206 14 14 chr10 79076269 79076342 -61240423 - MER96 DNA MER1_type? 0 175 103 383 237 11 0 chr10 79078451 79078544 -61238221 + MIR SINE MIR 102 195 -67 201 348 0 0 chr10 79078739 79078808 -61237957 + L2 LINE L2 3167 3235 -78 204 179 0 0 chr10 79078888 79078927 -61237838 + L2 LINE L2 3268 3306 -7 485 198 9 0 chr10 79081966 79082082 -61234683 + GA-rich Low_complexity Low_complexity 2 118 0 183 80 0 0 chr10 79083066 79083091 -61233674 + (A)n Simple_repeat Simple_repeat 1 25 0 255 31 0 0 chr10 79084706 79084738 -61232027 + (TG)n Simple_repeat Simple_repeat 2 33 0 225 247 0 65 chr10 79086073 79086150 -61230615 - PABL_A LTR ERV1 -509 151 80 401 204 23 11 chr10 79088561 79088649 -61228116 - AluJb SINE Alu -8 294 206 1185 238 89 6 chr10 79090000 79090315 -61226450 + MER58B DNA MER1_type 1 341 0 701 178 28 122 chr10 79091608 79091821 -61224944 - MER96B DNA MER1_type? -224 193 1 374 212 153 0 chr10 79093655 79093773 -61222992 + MIR SINE MIR 91 226 -36 251 321 64 0 chr10 79094667 79094776 -61221989 + MIR3 SINE MIR 3 118 -90 183 156 0 0 chr10 79095072 79095104 -61221661 + A-rich Low_complexity Low_complexity 1 32 0 202 309 33 46 chr10 79095231 79095383 -61221382 - L2 LINE L2 -299 2973 2824 1990 151 20 0 chr10 79096194 79096493 -61220272 + AluSx SINE Alu 1 305 -7 1955 115 45 28 chr10 79096945 79097233 -61219532 - AluSx SINE Alu -19 293 1 21 0 0 0 chr10 79098659 79098680 -61218085 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 79098957 79098977 -61217788 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1127 225 9 0 chr10 79100149 79100371 -61216394 - MER58A DNA MER1_type 0 224 1 1031 189 0 0 chr10 79101125 79101289 -61215476 + FRAM SINE Alu 1 164 -2 211 206 63 32 chr10 79102231 79102294 -61214471 - MIR3 SINE MIR -9 199 135 195 289 72 12 chr10 79102646 79102729 -61214036 + MIR SINE MIR 70 157 -105 536 253 89 0 chr10 79102739 79102885 -61213880 - MIR SINE MIR -31 231 73 304 236 0 0 chr10 79106800 79106872 -61209893 + MIR SINE MIR 31 102 -160 183 208 14 97 chr10 79106889 79106961 -61209804 + MIR SINE MIR 80 145 -117 200 307 50 40 chr10 79113180 79113281 -61203484 + MIR SINE MIR 20 121 -87 396 0 0 0 chr10 79113602 79113646 -61203119 + (TA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr10 79116053 79116076 -61200689 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr10 79116956 79116996 -61199769 + (CA)n Simple_repeat Simple_repeat 1 40 0 222 37 0 0 chr10 79120396 79120423 -61196342 + (TA)n Simple_repeat Simple_repeat 1 27 0 421 352 139 11 chr10 79122234 79122789 -61193976 + L2 LINE L2 2636 3258 -14 250 287 37 61 chr10 79123708 79123872 -61192893 + MIR SINE MIR 78 237 -25 228 297 10 10 chr10 79126158 79126259 -61190506 + (TG)n Simple_repeat Simple_repeat 1 101 0 2826 122 18 86 chr10 79127315 79127877 -61188888 + pTR5 LTR ERV1 143 2295 -143 584 163 0 0 chr10 79127879 79127977 -61188788 - MSTD LTR MaLR -294 102 5 1763 174 10 3 chr10 79128158 79128451 -61188314 + AluJo SINE Alu 1 295 -17 474 73 29 0 chr10 79128477 79128545 -61188220 + Alu SINE Alu 3 72 -238 1184 158 20 5 chr10 79128894 79129090 -61187675 - AluSg/x SINE Alu -29 283 85 2181 122 6 3 chr10 79129260 79129571 -61187194 + AluSx SINE Alu 1 312 0 2255 123 34 29 chr10 79129571 79129954 -61186811 + Tigger1 DNA MER2_type 842 1226 -1192 412 201 51 68 chr10 79130237 79130402 -61186363 + MLT1I LTR MaLR 236 547 -2 2354 102 0 0 chr10 79130491 79130796 -61185969 - AluSx SINE Alu -7 305 1 1254 141 0 0 chr10 79130796 79130980 -61185785 - LTR26B LTR ERV1 -347 184 1 805 246 74 49 chr10 79131056 79131341 -61185424 + LTR33 LTR ERVL 38 329 -192 1620 150 12 0 chr10 79131481 79131727 -61185038 - LTR26 LTR ERV1 0 603 355 246 93 0 23 chr10 79131972 79132015 -61184750 + MIR SINE MIR 111 152 -56 25 0 0 0 chr10 79132145 79132170 -61184595 + AT_rich Low_complexity Low_complexity 1 25 0 1053 233 13 4 chr10 79132362 79132598 -61184167 - MIR SINE MIR -4 258 21 2033 141 48 44 chr10 79132700 79132870 -61183895 - L1MA8 LINE L1 0 6291 6123 2164 114 3 26 chr10 79132870 79133176 -61183589 + AluSg SINE Alu 1 299 -11 2033 141 48 44 chr10 79133176 79133439 -61183326 - L1MA8 LINE L1 -168 6123 5856 493 297 156 25 chr10 79133659 79134264 -61182501 + L2 LINE L2 2586 3272 0 373 335 52 12 chr10 79134284 79134457 -61182308 - Charlie8 DNA MER1_type -2236 181 2 657 249 11 37 chr10 79135547 79135736 -61181029 + MIR SINE MIR 59 242 -20 205 303 61 65 chr10 79135769 79136001 -61180764 + MIR SINE MIR 17 250 -12 239 287 139 0 chr10 79136525 79136626 -61180139 + MIR3 SINE MIR 87 201 -7 452 331 76 0 chr10 79138598 79138770 -61177995 + MIR SINE MIR 24 208 -54 185 260 165 16 chr10 79139069 79139196 -61177569 + MIR SINE MIR 117 262 0 190 296 0 0 chr10 79140441 79140495 -61176270 + L2 LINE L2 3218 3271 -1 219 175 0 0 chr10 79142163 79142220 -61174545 + (CA)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr10 79144185 79144206 -61172559 + (TA)n Simple_repeat Simple_repeat 2 22 0 364 251 130 26 chr10 79147022 79147253 -61169512 + L1ME4a LINE L1 5630 5884 -237 306 196 7 147 chr10 79147545 79147688 -61169077 - MIR SINE MIR -73 189 67 650 317 72 18 chr10 79147712 79148183 -61168582 - L2 LINE L2 -106 3207 2712 748 245 66 76 chr10 79149379 79149681 -61167084 + MER102b DNA MER1_type 42 340 -1 189 175 0 0 chr10 79151592 79151632 -61165133 + CT-rich Low_complexity Low_complexity 2 41 0 240 59 0 0 chr10 79151634 79151668 -61165097 + (CA)n Simple_repeat Simple_repeat 1 34 0 2100 126 0 7 chr10 79152148 79152450 -61164315 + AluSx SINE Alu 2 301 -11 181 296 45 61 chr10 79153413 79153545 -61163220 + L2 LINE L2 2948 3077 -195 2183 132 17 18 chr10 79154069 79154435 -61162330 + MLT2A2 LTR ERVL 1 309 -144 340 246 60 37 chr10 79155496 79155630 -61161135 - Charlie8 DNA MER1_type -2193 224 88 22 0 0 0 chr10 79156727 79156749 -61160016 + AT_rich Low_complexity Low_complexity 1 22 0 1329 192 8 12 chr10 79156768 79157013 -61159752 - AluJo SINE Alu -53 259 16 1787 155 30 0 chr10 79158065 79158368 -61158397 - AluJo SINE Alu 0 312 1 385 287 109 14 chr10 79158390 79158912 -61157853 + L1ME4a LINE L1 5504 6116 -5 2051 134 7 7 chr10 79159173 79159472 -61157293 - AluSx SINE Alu -13 299 1 3820 146 33 8 chr10 79161257 79161886 -61154879 + L1MB3 LINE L1 5537 6181 -2 1744 144 22 0 chr10 79162259 79162536 -61154229 + AluJo SINE Alu 18 300 -12 473 231 157 30 chr10 79162591 79162725 -61154040 - MIR SINE MIR -98 164 14 21 57 0 0 chr10 79165394 79165429 -61151336 + AT_rich Low_complexity Low_complexity 1 35 0 305 226 140 0 chr10 79165777 79165870 -61150895 - MER5C DNA MER1_type 0 324 219 720 143 19 0 chr10 79165872 79165977 -61150788 + FLAM_C SINE Alu 2 108 -35 225 0 0 0 chr10 79165977 79166002 -61150763 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 679 220 79 28 chr10 79166002 79166216 -61150549 - MER5C DNA MER1_type -99 225 1 339 237 149 26 chr10 79166384 79166498 -61150267 + L2 LINE L2 3185 3312 -1 23 0 0 0 chr10 79166537 79166560 -61150205 + AT_rich Low_complexity Low_complexity 1 23 0 279 222 0 0 chr10 79166573 79166627 -61150138 + MER103 DNA DNA 70 123 -43 2332 80 0 13 chr10 79166633 79166932 -61149833 - AluY SINE Alu -16 295 1 349 350 8 0 chr10 79167190 79167313 -61149452 + MIR SINE MIR 139 262 0 330 296 65 28 chr10 79167387 79167495 -61149270 + L2 LINE L2 3153 3264 -8 252 77 0 0 chr10 79168143 79168182 -61148583 + (A)n Simple_repeat Simple_repeat 1 39 0 402 226 0 47 chr10 79168470 79168576 -61148189 - MER5A DNA MER1_type -80 109 9 233 309 86 53 chr10 79168605 79168757 -61148008 + L3b LINE CR1 1279 1435 -148 542 254 99 28 chr10 79169574 79169755 -61147010 + MIR SINE MIR 40 233 -29 185 204 0 93 chr10 79169750 79169804 -61146961 - MIR SINE MIR -3 259 211 * 183 162 0 0 chr10 79169883 79169920 -61146845 + (ATG)n Simple_repeat Simple_repeat 2 38 0 195 229 33 33 chr10 79171743 79171804 -61144961 - MIR SINE MIR -122 140 80 292 272 37 0 chr10 79173045 79173126 -61143639 + L1ME1 LINE L1 395 478 -5918 356 177 0 13 chr10 79173316 79173395 -61143370 + CT-rich Low_complexity Low_complexity 3 80 0 6360 234 79 34 chr10 79173864 79173967 -61142798 + L1ME1 LINE L1 775 872 -5534 2089 134 3 13 chr10 79173967 79174297 -61142468 + AluSx SINE Alu 1 312 0 6360 234 79 34 chr10 79174297 79178161 -61138604 + L1ME1 LINE L1 872 4984 -1422 1494 193 18 89 chr10 79178175 79178568 -61138197 + MLT1D-int LTR MaLR 980 1344 -27 1435 193 112 26 chr10 79178573 79178956 -61137809 + MLT1D LTR MaLR 90 505 0 493 130 22 22 chr10 79178961 79179053 -61137712 - L1ME LINE L1 -505 5661 5570 3339 210 66 24 chr10 79179054 79179962 -61136803 + L1ME1 LINE L1 5413 6350 -76 1959 89 3 102 chr10 79180998 79181322 -61135443 + AluSx SINE Alu 1 292 -20 435 254 115 31 chr10 79182976 79183106 -61133659 - L2 LINE L2 0 3313 3173 380 184 8 0 chr10 79183409 79183481 -61133284 + L1M4 LINE L1 4507 4581 -1565 398 286 98 0 chr10 79183527 79183660 -61133105 + L1ME3A LINE L1 6020 6165 -5 2163 240 102 28 chr10 79183778 79184533 -61132232 - L2 LINE L2 -338 2976 2166 1743 183 85 59 chr10 79184897 79185357 -61131408 + MLT2B1 LTR ERVL 1 472 -48 522 347 29 16 chr10 79185905 79186147 -61130618 + MIR SINE MIR 18 262 0 405 0 0 0 chr10 79186565 79186610 -61130155 + (TG)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr10 79187225 79187247 -61129518 + (CAAAAA)n Simple_repeat Simple_repeat 1 22 0 2097 134 0 10 chr10 79188009 79188315 -61128450 - AluSx SINE Alu -9 303 1 822 124 16 16 chr10 79188403 79188524 -61128241 + FLAM_C SINE Alu 12 132 -11 1023 174 16 21 chr10 79191859 79192049 -61124716 - MER5A DNA MER1_type 0 189 1 1650 327 50 52 chr10 79192100 79193050 -61123715 + L3 LINE CR1 626 1574 -3 208 338 42 14 chr10 79194233 79194304 -61122461 + MIR SINE MIR 33 105 -103 266 284 25 37 chr10 79196927 79197008 -61119757 + L2 LINE L2 3234 3313 0 2116 108 4 0 chr10 79197192 79197494 -61119271 + AluSp SINE Alu 6 308 0 351 0 0 0 chr10 79197568 79197607 -61119158 + (TG)n Simple_repeat Simple_repeat 1 39 0 844 192 2 14 chr10 79197852 79198019 -61118746 + MER66B LTR ERV1 1 308 -246 1529 152 86 17 chr10 79198369 79198671 -61118094 + MER66B LTR ERV1 164 486 0 394 301 41 41 chr10 79199336 79199532 -61117233 + MIR SINE MIR 21 216 -46 2382 92 0 13 chr10 79200215 79200529 -61116236 - AluSg SINE Alu 0 310 1 198 0 0 0 chr10 79201704 79201726 -61115039 + (A)n Simple_repeat Simple_repeat 1 22 0 225 0 0 0 chr10 79201729 79201754 -61115011 + (CAGGG)n Simple_repeat Simple_repeat 2 26 0 1573 183 3 30 chr10 79201754 79202049 -61114716 + AluJo SINE Alu 8 294 -18 263 261 141 0 chr10 79202089 79202181 -61114584 - MER103 DNA DNA -6 160 56 1087 171 39 10 chr10 79202285 79202490 -61114275 - MER20 DNA MER1_type -1 218 8 22 0 0 0 chr10 79204252 79204274 -61112491 + AT_rich Low_complexity Low_complexity 1 22 0 1468 174 114 129 chr10 79205114 79205642 -61111123 + MLT2B1 LTR ERVL 1 520 0 203 262 0 0 chr10 79205980 79206022 -61110743 - L2 LINE L2 -17 3296 3255 36 53 0 0 chr10 79206109 79206166 -61110599 + AT_rich Low_complexity Low_complexity 1 57 0 1760 175 20 0 chr10 79206166 79206463 -61110302 - AluSx SINE Alu -9 303 1 281 146 36 0 chr10 79206470 79206525 -61110240 - MIR SINE MIR -63 199 143 306 0 0 0 chr10 79206631 79206665 -61110100 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1424 180 4 0 chr10 79206676 79206926 -61109839 - AluJb SINE Alu -56 256 6 1013 262 47 9 chr10 79207834 79208067 -61108698 - MIR SINE MIR -2 260 19 1618 171 10 7 chr10 79212905 79213198 -61103567 - AluJo SINE Alu -14 298 5 237 256 15 98 chr10 79214517 79214650 -61102115 + L2 LINE L2 2539 2660 -654 24 0 0 0 chr10 79215896 79215920 -61100845 + AT_rich Low_complexity Low_complexity 1 24 0 301 182 0 45 chr10 79216796 79216862 -61099903 + LTR67 LTR ERVL 493 555 -2 216 211 0 0 chr10 79216938 79216976 -61099789 + polypyrimidine Low_complexity Low_complexity 3 40 0 1982 85 4 0 chr10 79217683 79217943 -61098822 + AluSp SINE Alu 50 310 -3 222 191 85 0 chr10 79220304 79220351 -61096414 + L2 LINE L2 3221 3271 -1 255 292 44 102 chr10 79221079 79221216 -61095549 + L2 LINE L2 3144 3272 0 763 257 5 32 chr10 79222203 79222390 -61094375 + MIR SINE MIR 23 204 -58 186 43 0 0 chr10 79224467 79224490 -61092275 + (GA)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr10 79225449 79225470 -61091295 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 422 224 102 48 chr10 79225491 79225638 -61091127 + L1ME3 LINE L1 6000 6154 -8 432 272 30 9 chr10 79230850 79230995 -61085770 - L1MC4 LINE L1 -1 8041 7785 495 290 9 32 chr10 79231033 79231250 -61085515 - L1MC4 LINE L1 -126 7916 7705 895 211 65 5 chr10 79231347 79231532 -61085233 - MER58A DNA MER1_type -26 198 3 2307 97 0 0 chr10 79231650 79231960 -61084805 - AluSx SINE Alu -2 310 1 605 219 40 13 chr10 79232016 79232167 -61084598 - L1MA9 LINE L1 -122 6190 6036 355 287 49 21 chr10 79232275 79232418 -61084347 - L1MC4a LINE L1 -549 7259 7113 225 200 0 0 chr10 79233259 79233299 -61083466 - MIR SINE MIR -52 210 171 268 241 0 0 chr10 79233519 79233573 -61083192 - MIR SINE MIR 0 262 209 369 326 96 51 chr10 79234857 79235170 -61081595 + L2 LINE L2 2508 2834 -480 318 255 71 10 chr10 79235352 79235450 -61081315 + HAL1b LINE L1 1242 1345 -3 2092 109 30 0 chr10 79235462 79235765 -61081000 + AluSx SINE Alu 1 312 0 2360 35 0 38 chr10 79241092 79241408 -61075357 + AluY SINE Alu 1 304 -7 404 258 39 0 chr10 79241419 79241547 -61075218 + HAL1b LINE L1 451 583 -765 2290 180 103 17 chr10 79241810 79242293 -61074472 - MER44D DNA MER2_type -16 589 10 2796 75 16 11 chr10 79243006 79243378 -61073387 - THE1C LTR MaLR -1 374 1 1180 277 54 36 chr10 79243413 79243992 -61072773 + L2 LINE L2 2726 3313 0 25 51 0 0 chr10 79244304 79244343 -61072422 + AT_rich Low_complexity Low_complexity 1 39 0 1344 164 24 134 chr10 79245263 79245626 -61071139 - MLT1A1 LTR MaLR -1 364 49 1952 145 0 0 chr10 79245626 79245923 -61070842 + AluSx SINE Alu 1 297 -15 1344 164 24 134 chr10 79245923 79245968 -61070797 - MLT1A1 LTR MaLR -316 49 1 183 129 0 0 chr10 79246348 79246379 -61070386 + (TG)n Simple_repeat Simple_repeat 1 31 0 381 333 126 12 chr10 79247597 79247843 -61068922 + MER113 DNA MER1_type? 238 511 -10 201 289 0 0 chr10 79249646 79249691 -61067074 + L2 LINE L2 3205 3249 -23 369 0 0 0 chr10 79249839 79249880 -61066885 + (CA)n Simple_repeat Simple_repeat 2 42 0 516 318 84 50 chr10 79252471 79252814 -61063951 + L2 LINE L2 2258 2612 -702 209 81 0 27 chr10 79252855 79252892 -61063873 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 696 214 53 111 chr10 79253165 79253520 -61063245 + MLT1A2 LTR MaLR 1 310 -86 3725 237 61 16 chr10 79255545 79256950 -61059815 - L1MDa LINE L1 -2734 3806 2335 238 277 75 46 chr10 79257936 79258049 -61058716 - MIR SINE MIR -89 119 1 1875 181 28 25 chr10 79258740 79258934 -61057831 - Tigger2a DNA MER2_type -2314 394 202 2015 136 0 31 chr10 79258934 79259251 -61057514 + AluSx SINE Alu 1 307 -5 1875 181 28 25 chr10 79259251 79259449 -61057316 - Tigger2a DNA MER2_type -2506 202 1 25 83 0 0 chr10 79261262 79261322 -61055443 + AT_rich Low_complexity Low_complexity 1 60 0 244 151 94 19 chr10 79261390 79261443 -61055322 - tRNA-Thr-ACA tRNA tRNA -13 63 7 306 244 52 51 chr10 79262242 79262385 -61054380 - L1M3 LINE L1 -556 5624 5481 198 323 200 5 chr10 79262506 79262701 -61054064 + MIR SINE MIR 20 252 -10 180 0 0 0 chr10 79262810 79262830 -61053935 + (T)n Simple_repeat Simple_repeat 1 20 0 252 235 118 0 chr10 79263000 79263085 -61053680 + LTR16A1 LTR ERVL 159 253 -204 516 16 0 0 chr10 79263330 79263391 -61053374 + (CA)n Simple_repeat Simple_repeat 2 62 0 419 136 0 11 chr10 79263837 79263925 -61052840 + (GGAA)n Simple_repeat Simple_repeat 4 90 0 2281 98 0 25 chr10 79263961 79264278 -61052487 + AluSx SINE Alu 1 309 -3 309 280 47 24 chr10 79264280 79264420 -61052345 - L1M3 LINE L1 -2344 5441 5325 220 220 0 0 chr10 79264664 79264714 -61052051 + T-rich Low_complexity Low_complexity 1 50 0 628 243 22 39 chr10 79264718 79264899 -61051866 - MER5B DNA MER1_type 0 178 1 340 254 239 8 chr10 79264899 79265029 -61051736 - MER58B DNA MER1_type -10 331 172 518 239 18 0 chr10 79265120 79265229 -61051536 - MER5A DNA MER1_type -72 117 7 661 206 119 6 chr10 79265244 79265404 -61051361 - MER5B DNA MER1_type 0 178 1 219 189 0 0 chr10 79265551 79265588 -61051177 + MER5B DNA MER1_type 142 178 0 21 36 0 0 chr10 79265959 79265987 -61050778 + AT_rich Low_complexity Low_complexity 1 28 0 352 304 100 57 chr10 79266071 79266402 -61050363 + L1 LINE L1 3350 3704 -2442 2238 166 3 8 chr10 79266402 79266769 -61049996 + MER47A DNA MER2_type 2 366 0 352 304 100 57 chr10 79266769 79266858 -61049907 + L1 LINE L1 3704 3788 -2358 394 289 28 42 chr10 79266863 79267005 -61049760 + HAL1 LINE L1 4 143 -2364 216 167 0 0 chr10 79267059 79267107 -61049658 + (TA)n Simple_repeat Simple_repeat 2 49 0 311 176 0 0 chr10 79267594 79267645 -61049120 + Alu SINE Alu 1 51 -249 976 218 65 22 chr10 79267678 79267953 -61048812 + L1ME3A LINE L1 5825 6111 -59 2480 87 0 0 chr10 79267954 79268263 -61048502 + AluSx SINE Alu 2 310 -2 406 322 107 48 chr10 79268388 79268786 -61047979 + L1ME LINE L1 919 1430 -1146 782 62 0 0 chr10 79268793 79268890 -61047875 - AluY SINE Alu -10 301 205 494 293 93 80 chr10 79269377 79269954 -61046811 + L1ME LINE L1 2037 2574 -3641 262 253 68 27 chr10 79270061 79270207 -61046558 + L1ME LINE L1 2746 2897 -3318 4696 151 40 32 chr10 79270761 79270987 -61045778 + L1MA8 LINE L1 4970 5193 -1098 2580 71 0 0 chr10 79270987 79271298 -61045467 + AluY SINE Alu 1 311 0 4696 151 40 32 chr10 79271298 79272214 -61044551 + L1MA8 LINE L1 5193 6124 -167 365 276 159 24 chr10 79272203 79272536 -61044229 + L1ME LINE L1 5451 5828 -362 * 1163 152 40 5 chr10 79272637 79272835 -61043930 + L1MB2 LINE L1 5960 6164 -7 25 65 0 0 chr10 79273025 79273071 -61043694 + AT_rich Low_complexity Low_complexity 1 46 0 226 211 18 35 chr10 79273099 79273156 -61043609 - MIR SINE MIR -129 79 24 1154 111 88 6 chr10 79274064 79274245 -61042520 - AluJb SINE Alu -24 288 93 198 0 0 0 chr10 79274332 79274354 -61042411 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 651 234 55 14 chr10 79274547 79274692 -61042073 - FRAM SINE Alu -14 152 2 575 290 174 45 chr10 79274694 79275385 -61041380 + L2 LINE L2 2517 3291 -22 1660 208 13 24 chr10 79277557 79277940 -61038825 + MLT1A2 LTR MaLR 1 372 -2 365 371 0 15 chr10 79278158 79278290 -61038475 - L2 LINE L2 -1 3271 3142 2471 73 0 13 chr10 79278356 79278670 -61038095 + AluY SINE Alu 1 310 -1 1690 286 15 16 chr10 79279006 79279622 -61037143 + L1ME2 LINE L1 3372 3986 -2229 2974 241 46 23 chr10 79279668 79280870 -61035895 + L1ME2 LINE L1 4858 6232 -1 295 238 38 12 chr10 79280873 79280953 -61035812 + L3 LINE CR1 1407 1488 -89 427 331 66 0 chr10 79281087 79281268 -61035497 + MIR SINE MIR 50 242 -20 281 299 71 24 chr10 79281429 79281556 -61035209 + MIR SINE MIR 14 146 -116 904 251 38 4 chr10 79282067 79282302 -61034463 + MIR SINE MIR 20 262 0 2272 116 0 3 chr10 79282687 79282998 -61033767 + AluSx SINE Alu 1 310 -2 200 200 0 0 chr10 79283669 79283709 -61033056 + CT-rich Low_complexity Low_complexity 2 41 0 334 275 125 0 chr10 79284259 79284379 -61032386 - MER96 DNA MER1_type? -27 148 14 1169 249 0 4 chr10 79284887 79285112 -61031653 - MER58A DNA MER1_type 0 224 1 197 348 54 9 chr10 79285301 79285413 -61031352 + L2 LINE L2 3141 3257 -15 273 323 54 0 chr10 79287061 79287154 -61029611 + MIR SINE MIR 50 147 -61 2014 156 0 0 chr10 79287341 79287784 -61028981 - AluSc SINE Alu 0 443 1 290 296 10 31 chr10 79288355 79288453 -61028312 + L2 LINE L2 3169 3264 -8 234 0 0 0 chr10 79288539 79288565 -61028200 + (TG)n Simple_repeat Simple_repeat 2 27 0 1415 246 52 43 chr10 79288597 79289020 -61027745 - LTR16C LTR ERVL 0 491 65 191 163 23 0 chr10 79289090 79289133 -61027632 + MIR SINE MIR 148 191 -71 458 217 66 0 chr10 79289323 79289429 -61027336 - MER103 DNA DNA -50 116 4 1750 166 36 3 chr10 79289617 79289918 -61026847 - AluJb SINE Alu -1 311 1 214 296 88 64 chr10 79290176 79290213 -61026552 + MIR SINE MIR 129 164 -98 2033 146 21 29 chr10 79290213 79290590 -61026175 + THE1C LTR MaLR 1 374 -1 214 296 88 64 chr10 79290590 79290677 -61026088 + MIR SINE MIR 164 256 -6 526 296 65 53 chr10 79290926 79291342 -61025423 - L2 LINE L2 -5 3308 2888 628 277 45 28 chr10 79291567 79291801 -61024964 - MIR SINE MIR -21 241 3 371 277 155 44 chr10 79291983 79292200 -61024565 + HAL1b LINE L1 695 887 -461 2490 84 0 3 chr10 79292200 79292510 -61024255 + AluY SINE Alu 1 309 -2 371 277 155 44 chr10 79292510 79292653 -61024112 + HAL1b LINE L1 887 1095 -253 2782 199 38 58 chr10 79292660 79293368 -61023397 + LTR8A LTR ERV1 34 727 0 1286 115 0 11 chr10 79293414 79293597 -61023168 + AluSg SINE Alu 1 181 -129 27 0 0 0 chr10 79293786 79293813 -61022952 + AT_rich Low_complexity Low_complexity 1 27 0 192 301 45 68 chr10 79294551 79294684 -61022081 - MIR SINE MIR -74 188 59 338 331 81 31 chr10 79295795 79296055 -61020710 + L2 LINE L2 2836 3108 -164 216 307 79 26 chr10 79296471 79296660 -61020105 + L2 LINE L2 2853 3051 -221 248 299 73 25 chr10 79296804 79296952 -61019813 + MIR SINE MIR 17 173 -89 1645 170 10 14 chr10 79297508 79297796 -61018969 - AluJo SINE Alu -22 290 4 214 243 27 54 chr10 79299241 79299315 -61017450 + L2 LINE L2 3242 3313 0 1557 230 42 12 chr10 79299360 79299690 -61017075 + MER58B DNA MER1_type 1 340 -1 328 256 56 48 chr10 79299742 79299867 -61016898 - L2 LINE L2 -5 3308 3183 251 275 0 0 chr10 79300144 79300213 -61016552 + L2 LINE L2 3203 3271 -1 279 286 102 10 chr10 79300240 79300338 -61016427 + MIR3 SINE MIR 93 199 -9 482 247 7 0 chr10 79302806 79302952 -61013813 + GA-rich Low_complexity Low_complexity 2 148 0 2503 163 20 46 chr10 79303078 79303576 -61013189 - L1MA4 LINE L1 -6 6294 5810 409 248 44 9 chr10 79303576 79303689 -61013076 + MER102a DNA MER1_type 210 326 -4 214 262 66 0 chr10 79303743 79303804 -61012961 + L2 LINE L2 3206 3270 -2 276 269 15 0 chr10 79303863 79303930 -61012835 + MER96 DNA MER1_type? 1 68 -107 1847 160 23 7 chr10 79303930 79304237 -61012528 - AluJb SINE Alu 0 312 1 236 322 15 52 chr10 79304389 79304589 -61012176 + MIR SINE MIR 5 235 -27 1976 131 105 0 chr10 79304590 79304904 -61011861 - MER7A DNA MER2_type -1 345 1 240 208 38 0 chr10 79305100 79305153 -61011612 - MER58A DNA MER1_type 0 224 170 543 152 0 0 chr10 79305180 79305259 -61011506 - MER58A DNA MER1_type 0 112 34 1703 180 48 14 chr10 79305639 79305934 -61010831 - AluJb SINE Alu -7 305 1 2074 121 6 10 chr10 79306164 79306477 -61010288 + AluSq SINE Alu 1 312 -1 1118 164 16 16 chr10 79307357 79307546 -61009219 + MER5A DNA MER1_type 1 189 0 516 32 0 0 chr10 79307635 79307697 -61009068 + (TG)n Simple_repeat Simple_repeat 2 63 0 483 316 32 7 chr10 79307758 79307913 -61008852 - MER5B DNA MER1_type -7 171 13 481 289 99 7 chr10 79307915 79308067 -61008698 - MER5A DNA MER1_type -15 174 9 1833 213 34 0 chr10 79308993 79309346 -61007419 - MLT1A1 LTR MaLR 0 365 1 688 291 15 10 chr10 79309535 79309738 -61007027 + MIR SINE MIR 1 204 -58 189 214 0 0 chr10 79309741 79309783 -61006982 + (TA)n Simple_repeat Simple_repeat 1 42 0 215 224 41 0 chr10 79310583 79310632 -61006133 - L2 LINE L2 -9 3263 3213 721 214 180 6 chr10 79310683 79310861 -61005904 + MER3 DNA MER1_type 1 209 0 246 109 43 0 chr10 79310865 79310911 -61005854 + MADE1 DNA Mariner 1 48 -32 472 234 175 7 chr10 79310922 79311076 -61005689 + MER5A DNA MER1_type 4 183 -6 556 227 58 47 chr10 79311094 79311266 -61005499 - MER5B DNA MER1_type -1 177 4 804 207 86 0 chr10 79311284 79311458 -61005307 - MER5A DNA MER1_type 0 189 1 423 273 67 6 chr10 79311509 79311674 -61005091 + MIR SINE MIR 87 261 -1 186 43 0 0 chr10 79311691 79311714 -61005051 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 343 239 0 0 chr10 79311725 79311792 -61004973 - L2 LINE L2 -35 3237 3171 353 208 38 47 chr10 79312906 79313012 -61003753 + MIR SINE MIR 50 154 -108 1305 157 54 89 chr10 79313021 79313391 -61003374 + MLT1D LTR MaLR 3 359 -146 1033 87 5 32 chr10 79313490 79313504 -61003261 + (TTCC)n Simple_repeat Simple_repeat 1 193 0 1033 87 5 32 chr10 79313504 79313689 -61003076 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 602 152 38 0 chr10 79313757 79313862 -61002903 - FLAM_A SINE Alu -1 141 33 2144 113 23 0 chr10 79314682 79314984 -61001781 + AluSq SINE Alu 1 309 -4 304 354 32 0 chr10 79315403 79315561 -61001204 - MIR SINE MIR -91 171 9 681 251 52 30 chr10 79315925 79316156 -61000609 + MIR SINE MIR 20 255 -7 452 277 23 51 chr10 79316822 79316999 -60999766 + L2 LINE L2 3126 3297 -16 357 274 115 19 chr10 79317415 79317572 -60999193 - MIR3 SINE MIR -7 201 30 369 270 92 33 chr10 79317763 79317915 -60998850 - MIR3 SINE MIR -15 193 33 222 276 17 0 chr10 79318159 79318217 -60998548 + (TA)n Simple_repeat Simple_repeat 2 60 0 420 307 39 34 chr10 79318321 79318622 -60998143 + L1ME4a LINE L1 5531 5834 -287 1251 86 0 0 chr10 79319893 79320044 -60996721 - AluSq/x SINE Alu -161 151 1 252 0 0 0 chr10 79320320 79320348 -60996417 + (CA)n Simple_repeat Simple_repeat 1 28 0 2307 106 7 0 chr10 79320473 79320775 -60995990 - AluSx SINE Alu -8 304 1 369 0 0 0 chr10 79323035 79323076 -60993689 + (TG)n Simple_repeat Simple_repeat 2 42 0 841 153 85 23 chr10 79325284 79325460 -60991305 - MER5A DNA MER1_type -1 188 2 363 295 87 27 chr10 79326555 79326704 -60990061 - MIR SINE MIR -56 206 49 411 320 0 0 chr10 79328754 79328854 -60987911 + MIR SINE MIR 50 149 -113 199 319 14 0 chr10 79329233 79329302 -60987463 + L3b LINE CR1 1378 1447 -136 330 26 0 0 chr10 79331290 79331329 -60985436 + (TTG)n Simple_repeat Simple_repeat 1 39 0 2134 123 7 0 chr10 79331924 79332217 -60984548 + AluSx SINE Alu 1 295 -17 263 27 0 27 chr10 79334815 79334852 -60981913 + (TA)n Simple_repeat Simple_repeat 2 37 0 276 331 48 16 chr10 79335489 79335613 -60981152 - L2 LINE L2 -3 3269 3142 687 274 38 5 chr10 79335670 79335856 -60980909 + MIR SINE MIR 70 261 -1 2315 101 0 25 chr10 79336190 79336508 -60980257 - AluSx SINE Alu -2 310 1 282 135 101 12 chr10 79337842 79337923 -60978842 - Alu SINE Alu -255 48 1 589 259 43 56 chr10 79337984 79338308 -60978457 + L1MD2 LINE L1 6040 6359 0 215 289 0 0 chr10 79338398 79338450 -60978315 - L2 LINE L2 -4 3268 3217 513 265 48 110 chr10 79339627 79339918 -60976847 + L2 LINE L2 2985 3257 -15 2080 154 3 0 chr10 79340075 79340386 -60976379 + AluSx SINE Alu 1 312 0 3747 144 5 49 chr10 79340804 79341435 -60975330 + LTR26 LTR ERV1 1 603 0 323 200 11 22 chr10 79342629 79342719 -60974046 + MIR SINE MIR 164 252 -10 193 272 40 88 chr10 79342784 79342909 -60973856 + L2 LINE L2 2810 2928 -344 * 495 272 37 7 chr10 79342894 79343030 -60973735 + L2 LINE L2 3174 3313 0 202 194 0 0 chr10 79343048 79343084 -60973681 + GA-rich Low_complexity Low_complexity 4 39 0 22 0 0 0 chr10 79343274 79343296 -60973469 + AT_rich Low_complexity Low_complexity 1 22 0 427 297 170 9 chr10 79343574 79343786 -60972979 + MIR SINE MIR 4 249 -13 867 198 36 0 chr10 79344603 79344770 -60971995 + FRAM SINE Alu 1 172 -4 10264 200 58 6 chr10 79345866 79348841 -60967924 + L1PA16 LINE L1 3184 6162 -4 287 229 36 0 chr10 79348904 79348987 -60967778 + CT-rich Low_complexity Low_complexity 1 86 0 1152 314 187 33 chr10 79349868 79351587 -60965178 + L2 LINE L2 629 2612 -702 209 81 0 27 chr10 79351628 79351665 -60965100 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 938 190 41 107 chr10 79351939 79352296 -60964469 + MLT1A2 LTR MaLR 1 310 -86 1719 161 37 34 chr10 79352301 79352623 -60964142 + L1MB8 LINE L1 5855 6177 -1 210 279 33 0 chr10 79352623 79352684 -60964081 + GA-rich Low_complexity Low_complexity 3 65 0 574 282 12 6 chr10 79352725 79352895 -60963870 - MER104 DNA Tc2 -9 171 1 421 244 211 6 chr10 79353071 79353227 -60963538 - MIR SINE MIR -69 193 6 2070 118 38 0 chr10 79353296 79353584 -60963181 + AluSq SINE Alu 15 313 0 332 257 170 19 chr10 79354592 79354798 -60961967 + MER102b DNA MER1_type 103 339 -2 2091 128 0 0 chr10 79354933 79355246 -60961519 - AluSx SINE Alu 0 313 1 31 0 0 0 chr10 79355246 79355277 -60961488 + AT_rich Low_complexity Low_complexity 1 31 0 198 71 0 0 chr10 79355471 79355499 -60961266 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1247 85 0 0 chr10 79355873 79356049 -60960716 - AluY SINE Alu 0 305 130 273 284 121 35 chr10 79356136 79356277 -60960488 - MIR SINE MIR -10 252 100 773 233 62 74 chr10 79356278 79356536 -60960229 - MIR SINE MIR 0 262 8 1834 113 0 4 chr10 79357681 79357947 -60958818 + L1MA1 LINE L1 6038 6302 0 622 250 98 27 chr10 79358131 79358355 -60958410 + MIR SINE MIR 9 248 -14 2272 103 0 7 chr10 79359207 79359507 -60957258 + AluSg SINE Alu 1 298 -12 571 338 13 9 chr10 79360938 79361163 -60955602 + MIR SINE MIR 21 246 -16 324 248 86 9 chr10 79361224 79361329 -60955436 + L2 LINE L2 3201 3313 0 696 225 46 6 chr10 79364047 79364220 -60952545 + MIR SINE MIR 66 245 -17 2489 80 0 0 chr10 79364224 79364524 -60952241 - AluSq SINE Alu -13 300 1 180 0 0 0 chr10 79365596 79365616 -60951149 + (A)n Simple_repeat Simple_repeat 1 20 0 356 284 175 14 chr10 79365725 79365936 -60950829 - MIR SINE MIR -10 252 8 3729 165 19 15 chr10 79366039 79366718 -60950047 + L1MB5 LINE L1 5480 6161 -13 3696 202 81 8 chr10 79368062 79369146 -60947619 - L1MB8 LINE L1 0 6178 4912 1337 159 9 27 chr10 79369146 79369366 -60947399 - AluJb SINE Alu -12 300 85 667 206 8 0 chr10 79369367 79369498 -60947267 - L1MB8 LINE L1 -1227 4919 4788 584 171 45 0 chr10 79369628 79369734 -60947031 + Charlie4a DNA MER1_type 30 140 -368 2228 193 23 21 chr10 79369734 79370165 -60946600 + LTR3 LTR ERVK 1 432 0 271 114 0 0 chr10 79370172 79370207 -60946558 + HERVK3 LTR ERVK 2 36 -7207 1270 225 32 14 chr10 79370209 79370578 -60946187 + Charlie4a DNA MER1_type 133 508 0 282 211 269 57 chr10 79370579 79370754 -60946011 + L2 LINE L2 3098 3309 -4 519 292 56 30 chr10 79370888 79371121 -60945644 - MIR SINE MIR -13 249 11 1869 220 52 77 chr10 79372109 79372697 -60944068 + MER77 LTR ERV1 54 594 -11 248 306 0 12 chr10 79372851 79372936 -60943829 + MER112 DNA MER1_type 2 85 -175 663 217 0 0 chr10 79373083 79373203 -60943562 - FLAM_A SINE Alu -13 120 1 321 261 59 121 chr10 79373424 79373696 -60943069 - MIR SINE MIR 0 262 8 1216 203 34 13 chr10 79373727 79373964 -60942801 - AluJo SINE Alu -22 290 49 909 232 108 16 chr10 79376797 79377103 -60939662 + MER102b DNA MER1_type 2 335 -6 374 219 29 38 chr10 79377476 79377581 -60939184 - ORSL DNA AcHobo -1 274 171 1659 168 16 33 chr10 79377621 79377924 -60938841 + AluJo SINE Alu 1 298 -14 905 204 0 0 chr10 79377927 79378106 -60938659 + AluJo/FRAM SINE Alu 137 315 0 501 219 19 0 chr10 79378119 79378224 -60938541 - ORSL DNA AcHobo -157 118 12 188 289 0 0 chr10 79378967 79379012 -60937753 + L2 LINE L2 3205 3249 -23 369 0 0 0 chr10 79379160 79379201 -60937564 + (CA)n Simple_repeat Simple_repeat 2 42 0 244 283 43 11 chr10 79380407 79380499 -60936266 + MIR SINE MIR 30 124 -84 468 250 104 61 chr10 79382473 79382685 -60934080 + MIR SINE MIR 36 256 -6 26 0 0 0 chr10 79385738 79385764 -60931001 + AT_rich Low_complexity Low_complexity 1 26 0 892 198 31 22 chr10 79387919 79388141 -60928624 - L1MB8 LINE L1 -3 6175 5952 309 155 0 0 chr10 79388786 79388844 -60927921 + (TG)n Simple_repeat Simple_repeat 1 58 0 2231 111 0 3 chr10 79390486 79390783 -60925982 - AluSx SINE Alu -15 297 2 1932 167 3 3 chr10 79391579 79391890 -60924875 + AluSx SINE Alu 1 311 -1 2364 93 0 3 chr10 79391893 79392193 -60924572 + AluSg SINE Alu 1 299 -11 212 256 26 90 chr10 79392580 79392736 -60924029 + MER5B DNA MER1_type 17 162 -16 1600 163 0 22 chr10 79393117 79393393 -60923372 + AluJo SINE Alu 35 304 -8 2741 82 5 14 chr10 79393862 79394229 -60922536 + THE1B LTR MaLR 1 364 0 491 288 39 13 chr10 79394245 79394398 -60922367 + MIR3 SINE MIR 7 163 -45 2233 118 0 0 chr10 79394942 79395231 -60921534 + AluSx SINE Alu 1 289 -23 209 269 30 15 chr10 79395764 79395831 -60920934 + L2 LINE L2 2778 2845 -469 231 319 151 17 chr10 79396094 79396213 -60920552 + L2 LINE L2 3138 3272 0 2034 137 0 0 chr10 79396688 79397003 -60919762 + AluSx SINE Alu 1 315 0 2218 163 36 15 chr10 79398342 79398754 -60918011 + L1MB3 LINE L1 5651 6071 -112 2257 146 62 41 chr10 79398754 79399171 -60917594 + MSTB LTR MaLR 1 426 0 557 120 90 0 chr10 79399171 79399271 -60917494 + L1MB4 LINE L1 6066 6174 -6 2237 125 0 0 chr10 79401318 79401615 -60915150 - AluSx SINE Alu -15 297 1 482 122 14 0 chr10 79401615 79401689 -60915076 - MER5A DNA MER1_type -114 75 1 261 0 0 0 chr10 79402020 79402049 -60914716 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2039 142 7 0 chr10 79402062 79402357 -60914408 + AluSq SINE Alu 1 297 -16 512 228 7 47 chr10 79403102 79403251 -60913514 - L2 LINE L2 0 3313 3171 279 283 189 0 chr10 79403587 79403693 -60913072 - MIR SINE MIR -62 146 21 340 304 70 0 chr10 79404047 79404162 -60912603 + L3 LINE CR1 1384 1506 -71 393 221 32 11 chr10 79404271 79404366 -60912399 - MER94 DNA DNA -35 99 3 192 143 0 0 chr10 79404573 79404615 -60912150 + (CA)n Simple_repeat Simple_repeat 2 43 0 181 377 0 0 chr10 79405604 79405673 -60911092 - MER5A DNA MER1_type -71 118 50 501 173 14 122 chr10 79405761 79405900 -60910865 + MER5B DNA MER1_type 42 165 -13 233 130 43 0 chr10 79406733 79406779 -60909986 + T-rich Low_complexity Low_complexity 5 52 0 1350 155 136 15 chr10 79406790 79407054 -60909711 - AluSg1 SINE Alu -13 296 1 684 175 32 48 chr10 79407093 79407282 -60909483 - Charlie5 DNA MER1_type 0 2624 2439 * 1029 207 18 47 chr10 79407277 79407580 -60909185 - Charlie5 DNA MER1_type -2491 121 1 410 274 67 18 chr10 79407729 79407893 -60908872 + MIR SINE MIR 71 242 -20 467 273 23 118 chr10 79408222 79408570 -60908195 + L2 LINE L2 2999 3313 0 183 184 0 0 chr10 79408899 79408937 -60907828 + (TA)n Simple_repeat Simple_repeat 2 39 0 252 306 0 0 chr10 79409447 79409519 -60907246 + CT-rich Low_complexity Low_complexity 4 75 0 442 284 55 8 chr10 79410037 79410164 -60906601 - L2 LINE L2 -1 3312 3180 368 319 57 7 chr10 79411661 79411802 -60904963 - MIR3 SINE MIR -7 201 54 356 229 202 0 chr10 79412693 79412802 -60903963 + MIR3 SINE MIR 14 144 -64 843 246 19 19 chr10 79413073 79413280 -60903485 - MIR SINE MIR 0 262 56 536 213 43 21 chr10 79413927 79414068 -60902697 + L2 LINE L2 2517 2660 -654 180 296 37 0 chr10 79414397 79414451 -60902314 + L2 LINE L2 1410 1465 -1849 213 341 34 11 chr10 79415804 79415892 -60900873 - MIR SINE MIR -92 116 27 2424 126 31 8 chr10 79415907 79416263 -60900502 + THE1B LTR MaLR 1 364 0 1389 178 74 53 chr10 79416484 79416770 -60899995 + LTR37A LTR ERV1 1 300 -126 1624 161 9 43 chr10 79416770 79417093 -60899672 - AluJb SINE Alu 0 312 1 1389 178 74 53 chr10 79417093 79417223 -60899542 + LTR37A LTR ERV1 300 426 0 637 319 11 22 chr10 79417527 79417712 -60899053 - MER91A DNA MER1_type -13 183 1 840 192 0 79 chr10 79417965 79418179 -60898586 + L1MB8 LINE L1 5809 6005 -173 562 176 118 0 chr10 79419007 79419126 -60897639 + FLAM_A SINE Alu 1 133 0 253 265 40 182 chr10 79419923 79420402 -60896363 - L2 LINE L2 -13 3259 2849 192 77 0 0 chr10 79420766 79420792 -60895973 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2021 112 0 0 chr10 79420797 79421074 -60895691 - AluSx SINE Alu -31 281 5 735 273 23 27 chr10 79421959 79422179 -60894586 + MIR SINE MIR 6 224 -38 849 282 107 15 chr10 79422359 79422770 -60893995 + MER113 DNA MER1_type? 63 511 -10 858 258 10 0 chr10 79424769 79424963 -60891802 - MIR SINE MIR -54 208 13 752 253 132 26 chr10 79426183 79426448 -60890317 + L1ME1 LINE L1 5874 6166 0 246 239 155 14 chr10 79428581 79428652 -60888113 - L2 LINE L2 0 3313 3233 444 256 50 56 chr10 79428664 79428844 -60887921 + LTR33A LTR ERVL 9 187 -336 649 290 114 40 chr10 79429052 79429506 -60887259 - L2 LINE L2 -71 3242 2670 499 305 8 47 chr10 79430718 79430901 -60885864 + L1MC/D LINE L1 5566 5738 -2070 2109 123 0 0 chr10 79430901 79431203 -60885562 + AluSx SINE Alu 1 302 -10 499 305 8 47 chr10 79431203 79431275 -60885490 + L1MC/D LINE L1 5738 5811 -1997 2092 109 3 0 chr10 79431330 79431624 -60885141 + AluSq SINE Alu 1 295 -18 2788 19 0 0 chr10 79431764 79432082 -60884683 + AluYb8 SINE Alu 1 318 0 2492 157 75 4 chr10 79432287 79432757 -60884008 + MLT1D LTR MaLR 1 503 -2 196 295 70 103 chr10 79434473 79434503 -60882262 + MER5B DNA MER1_type 20 49 -129 2026 124 3 0 chr10 79434503 79434802 -60881963 - AluSq SINE Alu -9 304 5 196 295 70 103 chr10 79434802 79434927 -60881838 + MER5B DNA MER1_type 49 170 -8 303 283 233 13 chr10 79436274 79436433 -60880332 - MER91A DNA MER1_type -2 194 1 570 268 24 77 chr10 79436560 79436728 -60880037 + MIR SINE MIR 53 211 -51 471 260 178 0 chr10 79437142 79437288 -60879477 - MER5B DNA MER1_type -1 177 6 299 281 68 48 chr10 79438304 79438450 -60878315 - MIR3 SINE MIR -26 182 34 1712 216 90 74 chr10 79438643 79439268 -60877497 - LTR27 LTR ERV1 0 636 2 676 239 102 0 chr10 79439268 79439444 -60877321 + MIR SINE MIR 49 242 -20 387 204 68 11 chr10 79439950 79440038 -60876727 + MER5A DNA MER1_type 14 106 -83 303 279 0 0 chr10 79440028 79440096 -60876669 - MIR SINE MIR -194 68 1 * 476 196 229 13 chr10 79441215 79441368 -60875397 - MER5A DNA MER1_type -1 188 3 475 318 91 0 chr10 79441374 79441528 -60875237 - MIR3 SINE MIR -40 168 1 227 312 71 71 chr10 79441583 79441753 -60875012 - MIR SINE MIR -45 217 48 342 282 68 114 chr10 79442385 79442736 -60874029 - L2 LINE L2 -10 3262 2928 426 351 22 40 chr10 79442811 79443036 -60873729 - L2 LINE L2 -515 2799 2579 1964 171 40 8 chr10 79443561 79443830 -60872935 + MER47A DNA MER2_type 4 288 -2035 2173 64 0 11 chr10 79443830 79444113 -60872652 - AluY SINE Alu -31 280 1 1964 171 40 8 chr10 79444113 79444194 -60872571 + MER47A DNA MER2_type 288 365 -1 258 266 69 51 chr10 79445149 79445263 -60871502 - MIR SINE MIR -89 119 1 320 319 118 0 chr10 79446018 79446162 -60870603 + MIR3 SINE MIR 14 174 -34 278 303 211 29 chr10 79446667 79446888 -60869877 - MIR SINE MIR -7 255 11 184 376 255 7 chr10 79446963 79447104 -60869661 + L3b LINE CR1 1393 1568 -15 200 294 15 29 chr10 79447790 79447858 -60868907 + MIR SINE MIR 74 141 -67 183 288 15 45 chr10 79447899 79447965 -60868800 + MIR3 SINE MIR 144 207 -1 2027 136 0 0 chr10 79448608 79448903 -60867862 + AluSx SINE Alu 1 295 -17 343 256 64 0 chr10 79449918 79449996 -60866769 + L2 LINE L2 3159 3241 -31 422 248 10 10 chr10 79450186 79450287 -60866478 - MER112 DNA MER1_type -8 252 152 250 360 0 0 chr10 79450690 79450776 -60865989 - L3 LINE CR1 -266 1311 1226 186 303 61 15 chr10 79450964 79451030 -60865735 - L3 LINE CR1 -1238 339 271 659 258 133 21 chr10 79451104 79451188 -60865577 + MER112 DNA MER1_type 2 75 -185 396 0 0 0 chr10 79451188 79451232 -60865533 + (CA)n Simple_repeat Simple_repeat 2 45 0 659 258 133 21 chr10 79451232 79451380 -60865385 + MER112 DNA MER1_type 75 260 0 358 348 54 0 chr10 79452154 79452266 -60864499 + L2 LINE L2 3150 3267 -5 539 215 215 0 chr10 79452725 79452874 -60863891 - MER5A DNA MER1_type -8 181 1 407 381 59 4 chr10 79452874 79453110 -60863655 + MIR SINE MIR 4 252 -10 427 252 56 19 chr10 79453169 79453276 -60863489 + MIR3 SINE MIR 45 155 -53 405 308 104 23 chr10 79454453 79454674 -60862091 - MIR SINE MIR 0 262 24 280 306 0 0 chr10 79454835 79454907 -60861858 + L2 LINE L2 3201 3272 0 237 218 70 106 chr10 79455243 79455385 -60861380 - L2 LINE L2 -1 3312 3176 936 241 67 79 chr10 79455827 79456233 -60860532 + MLT1I LTR MaLR 8 408 -1 22 0 0 0 chr10 79457843 79457865 -60858900 + AT_rich Low_complexity Low_complexity 1 22 0 487 270 114 46 chr10 79458189 79458496 -60858269 - MLT1J2 LTR MaLR 0 450 123 319 300 169 6 chr10 79460524 79460684 -60856081 + MIR SINE MIR 59 244 -18 481 196 179 0 chr10 79460840 79460952 -60855813 - FLAM_A SINE Alu -1 132 1 288 0 0 0 chr10 79461205 79461237 -60855528 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 369 0 0 0 chr10 79461236 79461277 -60855488 + (TG)n Simple_repeat Simple_repeat 2 42 0 185 289 124 45 chr10 79462028 79462229 -60854536 + L2 LINE L2 2651 2867 -447 264 285 152 7 chr10 79462601 79462752 -60854013 + MIR SINE MIR 72 244 -18 216 0 0 0 chr10 79462781 79462805 -60853960 + (TGG)n Simple_repeat Simple_repeat 3 26 0 240 239 22 98 chr10 79463057 79463149 -60853616 + MIR3 SINE MIR 105 189 -19 1997 119 0 11 chr10 79463595 79463919 -60852846 - AluSx SINE Alu 0 321 1 339 241 58 11 chr10 79464073 79464160 -60852605 + MIR SINE MIR 57 147 -115 439 266 130 33 chr10 79464311 79464495 -60852270 + MIR SINE MIR 60 261 -1 2275 100 0 0 chr10 79465094 79465404 -60851361 - AluY SINE Alu -1 310 1 1701 217 37 8 chr10 79465530 79465885 -60850880 + MLT1A1 LTR MaLR 1 365 0 704 261 19 37 chr10 79466038 79466253 -60850512 + MIR SINE MIR 51 261 -1 414 295 40 34 chr10 79466838 79466987 -60849778 - MIR SINE MIR -66 196 47 379 297 101 0 chr10 79467065 79467213 -60849552 + MIR SINE MIR 71 233 -29 1448 165 50 39 chr10 79467800 79468079 -60848686 + AluJb SINE Alu 1 282 -30 361 322 186 8 chr10 79468253 79468511 -60848254 - L2 LINE L2 0 3272 2969 590 122 148 17 chr10 79469525 79469733 -60847032 + FLAM_C SINE Alu 13 235 0 377 324 68 24 chr10 79470321 79470528 -60846237 + L2 LINE L2 3083 3298 -15 222 347 24 65 chr10 79470800 79470970 -60845795 - L2 LINE L2 -2 3270 3108 1024 168 98 30 chr10 79470987 79471284 -60845481 - MER33 DNA MER1_type 0 324 8 243 254 30 0 chr10 79471375 79471442 -60845323 + CT-rich Low_complexity Low_complexity 3 71 0 605 226 22 44 chr10 79471694 79471875 -60844890 - MER5B DNA MER1_type -1 177 1 659 313 16 10 chr10 79471958 79472150 -60844615 - MIR SINE MIR -53 209 17 186 208 0 0 chr10 79472696 79472744 -60844021 + A-rich Low_complexity Low_complexity 1 48 0 216 217 43 0 chr10 79473069 79473115 -60843650 + MIR SINE MIR 107 154 -108 247 208 0 75 chr10 79473408 79473461 -60843304 + L2 LINE L2 3252 3300 -13 1912 119 6 44 chr10 79473590 79473908 -60842857 + AluSx SINE Alu 1 306 -6 863 292 91 24 chr10 79473949 79474332 -60842433 + MLT1I LTR MaLR 1 409 0 201 400 33 8 chr10 79475016 79475136 -60841629 + MIR SINE MIR 129 251 -11 560 200 69 52 chr10 79475242 79475449 -60841316 + MER106B DNA MER1_type 1 1044 -15 6477 37 2 10 chr10 79476359 79477145 -60839620 + L1PA5 LINE L1 5375 6154 0 780 299 56 8 chr10 79477318 79477552 -60839213 + MIR SINE MIR 16 260 -2 215 305 19 9 chr10 79477633 79477738 -60839027 + CT-rich Low_complexity Low_complexity 1 106 0 461 338 99 5 chr10 79478274 79478475 -60838290 - MIR SINE MIR 0 262 43 649 240 33 0 chr10 79478543 79478693 -60838072 - MIR SINE MIR -21 241 87 732 261 98 14 chr10 79479504 79479720 -60837045 - MIR SINE MIR -22 240 14 363 306 137 35 chr10 79479796 79480051 -60836714 - L2 LINE L2 0 3313 3033 293 290 51 43 chr10 79481004 79481142 -60835623 + L2 LINE L2 3118 3256 -57 637 221 44 61 chr10 79481197 79481378 -60835387 - MIR SINE MIR -64 198 21 298 220 0 0 chr10 79482073 79482132 -60834633 + L2 LINE L2 3255 3313 0 648 268 66 6 chr10 79483269 79483452 -60833313 + MIR SINE MIR 37 230 -32 468 358 29 0 chr10 79483463 79483667 -60833098 - MIR SINE MIR -6 256 47 251 289 162 21 chr10 79483796 79483938 -60832827 + MIR SINE MIR 27 188 -74 761 227 61 15 chr10 79484073 79484271 -60832494 - MIR SINE MIR 0 262 56 272 306 46 0 chr10 79484375 79484483 -60832282 + MER103 DNA DNA 31 143 -23 2224 159 14 14 chr10 79485339 79485704 -60831061 + MLT1A1 LTR MaLR 1 365 0 2042 118 0 16 chr10 79486158 79486463 -60830302 - AluSx SINE Alu -12 300 1 879 195 97 5 chr10 79488666 79488851 -60827914 + MER3 DNA MER1_type 5 206 -3 345 24 0 0 chr10 79488886 79488928 -60827837 + (TG)n Simple_repeat Simple_repeat 2 43 0 292 240 183 0 chr10 79489700 79489804 -60826961 - MIR SINE MIR 0 262 140 367 241 23 0 chr10 79489910 79489997 -60826768 - MIR SINE MIR -75 187 99 361 262 12 12 chr10 79490140 79490224 -60826541 - MIR SINE MIR -177 85 2 1733 85 0 50 chr10 79490266 79490525 -60826240 - AluSc SINE Alu -32 277 32 2431 110 8 11 chr10 79491212 79491568 -60825197 + THE1A LTR MaLR 1 355 0 888 269 34 59 chr10 79491665 79492074 -60824691 + MLT1K LTR MaLR 189 587 -1 319 264 75 19 chr10 79492458 79492564 -60824201 + MIR SINE MIR 80 191 -71 1149 269 70 102 chr10 79492948 79493546 -60823219 + MLT1K LTR MaLR 2 580 -8 22 0 0 0 chr10 79493887 79493909 -60822856 + AT_rich Low_complexity Low_complexity 1 22 0 487 198 0 0 chr10 79496100 79496181 -60820584 + L2 LINE L2 3232 3312 -1 456 284 69 27 chr10 79497265 79497488 -60819277 + MIR SINE MIR 24 262 0 219 114 0 0 chr10 79497496 79497531 -60819234 + (CAT)n Simple_repeat Simple_repeat 2 36 0 225 0 0 0 chr10 79498629 79498654 -60818111 + (CA)n Simple_repeat Simple_repeat 1 25 0 363 349 156 6 chr10 79498672 79498873 -60817892 + MIR SINE MIR 20 251 -11 24 0 0 0 chr10 79499381 79499405 -60817360 + AT_rich Low_complexity Low_complexity 1 24 0 510 332 139 15 chr10 79499804 79500338 -60816427 + L2 LINE L2 2708 3310 -3 2173 131 0 0 chr10 79500443 79500755 -60816010 + AluSx SINE Alu 1 312 0 317 320 88 8 chr10 79500823 79500948 -60815817 - MIR SINE MIR -108 154 20 194 294 0 0 chr10 79502154 79502205 -60814560 + MIR SINE MIR 103 153 -109 2021 144 0 0 chr10 79502378 79502755 -60814010 - AluSq SINE Alu 0 377 1 194 238 16 24 chr10 79502847 79502973 -60813792 + (ATGGTG)n Simple_repeat Simple_repeat 3 127 0 371 229 24 12 chr10 79503739 79503822 -60812943 + MER5A DNA MER1_type 29 112 -77 3279 239 27 21 chr10 79503845 79505494 -60811271 - L1ME1 LINE L1 -17 6149 4489 236 333 0 0 chr10 79505496 79505556 -60811209 + MER5A DNA MER1_type 128 187 -2 507 291 26 7 chr10 79505574 79505725 -60811040 + MER5B DNA MER1_type 24 177 -1 189 270 0 0 chr10 79505805 79505842 -60810923 - MER5B DNA MER1_type -6 172 136 188 276 172 11 chr10 79507144 79507231 -60809534 + MIR SINE MIR 159 259 -3 198 196 43 22 chr10 79507236 79507282 -60809483 - MIR3 SINE MIR -153 55 9 555 233 165 21 chr10 79507754 79507990 -60808775 + MER102b DNA MER1_type 72 341 0 243 268 0 49 chr10 79508572 79508654 -60808111 + L2 LINE L2 3190 3267 -5 186 261 65 0 chr10 79509002 79509048 -60807717 - MIR SINE MIR -98 164 116 1422 151 91 87 chr10 79509160 79509576 -60807189 + LTR37B LTR ERV1 51 468 0 292 235 61 31 chr10 79509576 79509674 -60807091 + MIR3 SINE MIR 61 161 -47 312 352 57 13 chr10 79511586 79511745 -60805020 + MIR SINE MIR 20 185 -77 664 266 190 22 chr10 79511941 79512305 -60804460 + LTR16A LTR ERVL 24 448 -2 26 30 0 0 chr10 79512909 79512942 -60803823 + AT_rich Low_complexity Low_complexity 1 33 0 2292 112 0 0 chr10 79512944 79513229 -60803536 + AluSx SINE Alu 1 288 -24 465 34 0 0 chr10 79513229 79513288 -60803477 + (CATA)n Simple_repeat Simple_repeat 2 60 0 575 289 27 11 chr10 79514067 79514254 -60802511 + MIR SINE MIR 70 259 -3 266 167 77 77 chr10 79514863 79514958 -60801807 + MIR SINE MIR 50 145 -63 218 224 12 35 chr10 79515735 79515820 -60800945 + GA-rich Low_complexity Low_complexity 2 84 0 328 297 7 84 chr10 79516211 79516366 -60800399 + MIR SINE MIR 120 262 0 192 254 18 18 chr10 79516950 79517005 -60799760 + L2 LINE L2 3240 3294 -19 491 260 100 76 chr10 79517416 79517666 -60799099 - L2 LINE L2 0 3313 3058 352 311 38 15 chr10 79517729 79517861 -60798904 + MIR3 SINE MIR 67 201 -7 723 205 137 0 chr10 79518577 79518738 -60798027 - MIR SINE MIR -15 247 65 309 209 0 0 chr10 79518753 79518820 -60797945 - Charlie5 DNA MER1_type 0 2624 2558 2480 100 0 0 chr10 79518883 79519192 -60797573 + AluSq SINE Alu 1 309 -4 343 247 0 92 chr10 79519192 79519319 -60797446 + L1MC4 LINE L1 6610 6710 -1332 467 272 96 38 chr10 79519402 79519641 -60797124 + MLT1L LTR MaLR 14 266 -349 682 159 16 0 chr10 79519713 79519839 -60796926 - L1MB3 LINE L1 0 6183 6056 422 131 123 8 chr10 79519851 79519981 -60796784 - Charlie5 DNA MER1_type -58 2554 2410 801 134 106 21 chr10 79519998 79520140 -60796625 - FRAM SINE Alu -23 153 1 227 200 0 0 chr10 79521115 79521160 -60795605 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 390 319 0 10 chr10 79521205 79521321 -60795444 + MIR SINE MIR 37 149 -62 691 251 192 6 chr10 79521648 79521864 -60794901 - MIR SINE MIR -7 255 3 204 415 96 0 chr10 79521980 79522262 -60794503 - L2 LINE L2 -443 2871 2563 2048 142 0 0 chr10 79523810 79524195 -60792570 - AluSx SINE Alu 0 385 1 303 366 75 11 chr10 79526075 79526261 -60790504 - L2 LINE L2 -436 2878 2681 404 267 36 55 chr10 79526384 79526549 -60790216 - MIR3 SINE MIR -9 199 38 219 103 0 0 chr10 79527890 79527929 -60788836 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 649 120 4 58 chr10 79528370 79528612 -60788153 + (GGGA)n Simple_repeat Simple_repeat 1 229 0 248 250 26 26 chr10 79528863 79528939 -60787826 + L2 LINE L2 3196 3271 -1 732 220 148 31 chr10 79529671 79529894 -60786871 - MIR SINE MIR 0 262 14 1285 207 73 34 chr10 79531088 79531339 -60785426 - MER58B DNA MER1_type -2079 341 73 1836 176 0 19 chr10 79531339 79531651 -60785114 + AluJo SINE Alu 1 306 -6 1285 207 73 34 chr10 79531651 79531727 -60785038 - MER58B DNA MER1_type -2347 73 1 368 269 17 0 chr10 79531792 79531911 -60784854 + MER103 DNA DNA 3 123 -43 293 318 11 0 chr10 79532030 79532118 -60784647 - L3 LINE CR1 -84 1493 1405 228 35 0 0 chr10 79532593 79532622 -60784143 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 220 294 43 54 chr10 79533477 79533569 -60783196 + MIR3 SINE MIR 69 159 -49 252 219 0 123 chr10 79533571 79533621 -60783144 + MER58 DNA MER1_type 4 59 -282 1291 122 82 28 chr10 79533621 79533876 -60782889 - L1MA4 LINE L1 0 6300 6032 252 219 0 123 chr10 79533876 79533898 -60782867 + MER58 DNA MER1_type 59 184 -157 4821 130 18 58 chr10 79533898 79534313 -60782452 - L1PB4 LINE L1 -7 6149 5719 321 89 0 0 chr10 79534313 79534358 -60782407 + (TG)n Simple_repeat Simple_repeat 2 46 0 4821 130 18 58 chr10 79534358 79534916 -60781849 - L1PB4 LINE L1 -437 5719 5215 606 211 125 0 chr10 79534916 79535068 -60781697 + MER58A DNA MER1_type 51 221 -3 323 244 64 0 chr10 79536054 79536132 -60780633 + L2 LINE L2 3225 3307 -6 372 266 40 40 chr10 79536837 79536961 -60779804 + MIR SINE MIR 18 141 -67 189 239 65 0 chr10 79537080 79537126 -60779639 + MIR SINE MIR 198 246 -16 2306 83 3 27 chr10 79537433 79537734 -60779031 - AluY SINE Alu -17 294 1 617 202 9 0 chr10 79539278 79539387 -60777378 - MER81 DNA DNA 0 114 5 1963 91 8 4 chr10 79540542 79540827 -60775938 - AluSx SINE Alu 0 316 31 586 271 129 12 chr10 79540932 79541328 -60775437 + MLT1K LTR MaLR 10 533 -55 788 265 226 3 chr10 79541397 79541706 -60775059 + L2 LINE L2 2934 3311 -2 810 143 65 7 chr10 79541760 79541914 -60774851 + MER53 DNA DNA 3 165 -24 384 201 275 20 chr10 79542736 79542885 -60773880 - MER5A DNA MER1_type 0 189 3 312 319 30 22 chr10 79543714 79543849 -60772916 - MIR SINE MIR -8 254 119 242 275 197 26 chr10 79543871 79544064 -60772701 + MIR SINE MIR 9 234 -28 249 351 9 0 chr10 79544286 79544397 -60772368 + L3 LINE CR1 1446 1557 -20 218 213 21 0 chr10 79544404 79544451 -60772314 - MIR3 SINE MIR -51 157 110 564 240 0 0 chr10 79544674 79544853 -60771912 + (TG)n Simple_repeat Simple_repeat 2 180 0 253 220 30 126 chr10 79545534 79545730 -60771035 - MIR3 SINE MIR 0 208 35 553 283 127 20 chr10 79546835 79547165 -60769600 + L2 LINE L2 2688 3064 -249 1419 132 5 5 chr10 79547277 79547490 -60769275 - AluSg/x SINE Alu -3 309 97 201 196 0 0 chr10 79547563 79547609 -60769156 + GA-rich Low_complexity Low_complexity 1 46 0 269 241 330 0 chr10 79547723 79547835 -60768930 - MIR SINE MIR -82 180 32 249 238 61 0 chr10 79548804 79548880 -60767885 + MIR SINE MIR 69 149 -59 2172 116 0 3 chr10 79549124 79549442 -60767323 - AluSx SINE Alu 0 317 1 256 235 82 41 chr10 79550366 79550464 -60766301 + MIR3 SINE MIR 86 187 -21 227 222 191 56 chr10 79550476 79550602 -60766163 + MIR3 SINE MIR 43 185 -23 447 275 128 41 chr10 79550685 79550763 -60766002 - MIR SINE MIR -25 237 167 2216 123 7 0 chr10 79550763 79551073 -60765692 - AluSx SINE Alu 0 312 1 447 275 128 41 chr10 79551073 79551212 -60765553 - MIR SINE MIR -95 167 1 182 302 0 0 chr10 79552359 79552402 -60764363 - MIR3 SINE MIR -50 158 116 250 301 55 0 chr10 79553002 79553075 -60763690 + L2 LINE L2 3210 3286 -27 207 0 0 0 chr10 79555702 79555725 -60761040 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 204 284 159 23 chr10 79556161 79556249 -60760516 - L2 LINE L2 -2301 1013 914 206 352 80 0 chr10 79556638 79556726 -60760039 + L2 LINE L2 2976 3070 -202 184 319 0 72 chr10 79556878 79556947 -60759818 + L2 LINE L2 3189 3252 -20 409 303 97 48 chr10 79557084 79557571 -60759194 + L2 LINE L2 2543 3055 -217 1803 192 24 3 chr10 79557709 79558042 -60758723 - MER58B DNA MER1_type -1 340 1 263 376 83 0 chr10 79558042 79558151 -60758614 + L2 LINE L2 3148 3265 -7 230 300 0 57 chr10 79558260 79558400 -60758365 - MER103 DNA DNA -34 132 1 765 227 38 22 chr10 79558488 79558673 -60758092 - MER5A DNA MER1_type -1 188 1 1487 214 92 12 chr10 79558822 79559248 -60757517 + MLT1C LTR MaLR 1 460 -7 215 340 38 9 chr10 79560418 79560524 -60756241 + MIR SINE MIR 95 203 -59 391 319 151 0 chr10 79560543 79560709 -60756056 - MIR SINE MIR -13 249 59 324 0 0 0 chr10 79560780 79560816 -60755949 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 235 346 63 44 chr10 79560869 79561074 -60755691 - L2 LINE L2 -78 3194 2986 290 326 72 22 chr10 79561188 79561326 -60755439 + L2 LINE L2 3122 3266 -6 924 59 0 0 chr10 79561326 79561445 -60755320 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 212 239 230 35 chr10 79562369 79562482 -60754283 + MIR SINE MIR 125 259 -3 966 260 22 0 chr10 79562603 79562834 -60753931 - MIR SINE MIR -4 258 23 659 209 136 5 chr10 79563144 79563335 -60753430 + MER112 DNA MER1_type 6 221 -39 407 268 46 46 chr10 79563616 79563769 -60752996 + MIR SINE MIR 48 200 -62 2257 85 0 14 chr10 79564002 79564332 -60752433 - AluSc SINE Alu 0 326 1 223 216 83 95 chr10 79564402 79564556 -60752209 - MIR3 SINE MIR -43 165 51 1077 172 13 48 chr10 79565543 79565770 -60750995 - MER20 DNA MER1_type 0 219 1 545 224 41 34 chr10 79565842 79565989 -60750776 - MER103 DNA DNA -2 164 17 214 140 0 40 chr10 79566056 79566106 -60750659 + (TA)n Simple_repeat Simple_repeat 2 49 0 212 338 81 15 chr10 79566106 79566242 -60750523 - MIR3 SINE MIR -45 163 19 1237 194 40 119 chr10 79566325 79566830 -60749935 + MER4C LTR ERV1 1 465 0 2166 107 10 0 chr10 79567980 79568269 -60748496 + AluSc SINE Alu 1 292 -17 183 284 63 42 chr10 79568819 79568914 -60747851 - MIR SINE MIR -57 151 55 204 224 0 69 chr10 79569114 79569172 -60747593 + G-rich Low_complexity Low_complexity 6 59 0 2238 133 0 0 chr10 79569415 79569717 -60747048 - AluSx SINE Alu -10 302 1 232 356 56 11 chr10 79570926 79571016 -60745749 - L2 LINE L2 -36 3236 3143 1073 243 63 87 chr10 79571101 79571229 -60745536 + MER113 DNA MER1_type? 1 131 -390 1588 161 70 11 chr10 79571229 79571502 -60745263 - AluJo SINE Alu -23 289 1 1073 243 63 87 chr10 79571502 79571879 -60744886 + MER113 DNA MER1_type? 131 494 -27 186 363 22 0 chr10 79572068 79572159 -60744606 - MIR SINE MIR -111 151 59 476 234 123 32 chr10 79572782 79572936 -60743829 - MIR SINE MIR -35 227 60 342 0 0 0 chr10 79573222 79573260 -60743505 + (CA)n Simple_repeat Simple_repeat 2 39 0 283 269 141 26 chr10 79574121 79574277 -60742488 - MER102b DNA MER1_type 0 341 168 873 189 33 7 chr10 79574328 79574481 -60742284 - FRAM SINE Alu -5 161 5 2218 111 17 0 chr10 79574550 79574848 -60741917 + AluSp SINE Alu 3 305 -8 650 173 115 7 chr10 79574848 79574987 -60741778 - MIR SINE MIR -52 210 57 2075 89 30 0 chr10 79575067 79575338 -60741427 + AluSx SINE Alu 11 289 -23 845 36 27 0 chr10 79575340 79575451 -60741314 + (GAGAA)n Simple_repeat Simple_repeat 4 117 0 326 248 40 30 chr10 79575451 79575552 -60741213 - L1MC4 LINE L1 -17 8025 7924 214 215 108 31 chr10 79576090 79576155 -60740610 + MER91C DNA MER1_type 37 106 -34 213 321 9 46 chr10 79576283 79576392 -60740373 + MIR SINE MIR 23 127 -81 184 315 0 0 chr10 79576421 79576475 -60740290 - L2 LINE L2 -12 3260 3207 634 280 65 10 chr10 79576520 79576720 -60740045 - MIR SINE MIR -40 222 12 2412 80 0 16 chr10 79577076 79577390 -60739375 - AluY SINE Alu -2 309 1 653 247 39 65 chr10 79578716 79578947 -60737818 + MIR SINE MIR 23 247 -15 296 305 29 19 chr10 79579832 79579997 -60736768 + MIR SINE MIR 15 181 -27 888 176 70 0 chr10 79580092 79580319 -60736446 + L1MA4 LINE L1 6057 6299 -1 357 62 0 0 chr10 79581616 79581664 -60735101 + (CA)n Simple_repeat Simple_repeat 1 48 0 240 274 39 84 chr10 79583071 79583250 -60733515 + L2 LINE L2 2866 3036 -236 652 271 103 29 chr10 79583266 79583643 -60733122 + LTR16A LTR ERVL 10 414 -36 221 327 87 0 chr10 79584692 79584796 -60731969 - MIR SINE MIR -33 229 117 2296 87 17 0 chr10 79585075 79585364 -60731401 + AluSg SINE Alu 1 294 -16 573 292 100 65 chr10 79585385 79585875 -60730890 + L1ME4a LINE L1 5601 6107 -14 2602 63 0 13 chr10 79585894 79586209 -60730556 - AluY SINE Alu 0 311 1 309 209 0 0 chr10 79586272 79586339 -60730426 + Charlie5 DNA MER1_type 2558 2624 0 709 211 137 0 chr10 79586354 79586515 -60730250 + MIR SINE MIR 65 247 -15 339 311 38 15 chr10 79587231 79587363 -60729402 - MIR3 SINE MIR -7 201 67 510 268 88 64 chr10 79587426 79587676 -60729089 + L2 LINE L2 3058 3313 0 192 254 18 18 chr10 79588087 79588142 -60728623 - L2 LINE L2 -19 3294 3240 2585 156 23 4 chr10 79588576 79589186 -60727579 + L1M2 LINE L1 4912 5537 -743 477 256 0 31 chr10 79589192 79589321 -60727444 - MER90 LTR ERV1 -36 539 415 186 270 0 0 chr10 79589908 79589945 -60726820 + MER5B DNA MER1_type 136 172 -6 303 366 75 11 chr10 79591131 79591317 -60725448 - L2 LINE L2 -436 2878 2681 404 267 36 55 chr10 79591440 79591605 -60725160 - MIR3 SINE MIR -9 199 38 318 26 0 0 chr10 79592945 79592984 -60723781 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 628 124 4 58 chr10 79593425 79593667 -60723098 + (GGGA)n Simple_repeat Simple_repeat 1 229 0 248 250 26 26 chr10 79593918 79593994 -60722771 + L2 LINE L2 3196 3271 -1 732 220 148 31 chr10 79594729 79594952 -60721813 - MIR SINE MIR 0 262 14 1259 210 73 34 chr10 79596139 79596390 -60720375 - MER58B DNA MER1_type -2079 341 73 1836 176 0 19 chr10 79596390 79596702 -60720063 + AluJo SINE Alu 1 306 -6 1259 210 73 34 chr10 79596702 79596778 -60719987 - MER58B DNA MER1_type -2347 73 1 368 269 17 0 chr10 79596843 79596962 -60719803 + MER103 DNA DNA 3 123 -43 293 318 11 0 chr10 79597081 79597169 -60719596 - L3 LINE CR1 -84 1493 1405 228 35 0 0 chr10 79597644 79597673 -60719092 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 252 219 0 123 chr10 79598622 79598672 -60718093 + MER58 DNA MER1_type 4 59 -282 1291 122 82 28 chr10 79598672 79598927 -60717838 - L1MA4 LINE L1 0 6300 6032 252 219 0 123 chr10 79598927 79598949 -60717816 + MER58 DNA MER1_type 59 184 -157 4821 130 18 58 chr10 79598949 79599364 -60717401 - L1PB4 LINE L1 -7 6149 5719 285 98 0 0 chr10 79599364 79599405 -60717360 + (TG)n Simple_repeat Simple_repeat 2 42 0 4821 130 18 58 chr10 79599405 79599963 -60716802 - L1PB4 LINE L1 -437 5719 5215 606 211 125 0 chr10 79599963 79600115 -60716650 + MER58A DNA MER1_type 51 221 -3 323 244 64 0 chr10 79601102 79601180 -60715585 + L2 LINE L2 3225 3307 -6 372 266 40 40 chr10 79601884 79602008 -60714757 + MIR SINE MIR 18 141 -67 189 239 65 0 chr10 79602127 79602173 -60714592 + MIR SINE MIR 198 246 -16 2291 86 3 27 chr10 79602480 79602781 -60713984 - AluY SINE Alu -17 294 1 617 202 9 0 chr10 79604325 79604434 -60712331 - MER81 DNA DNA 0 114 5 1963 91 8 4 chr10 79605589 79605874 -60710891 - AluSx SINE Alu 0 316 31 586 271 129 12 chr10 79605979 79606375 -60710390 + MLT1K LTR MaLR 10 533 -55 788 265 226 3 chr10 79606444 79606753 -60710012 + L2 LINE L2 2934 3311 -2 810 143 65 7 chr10 79606807 79606961 -60709804 + MER53 DNA DNA 3 165 -24 384 201 275 20 chr10 79607783 79607932 -60708833 - MER5A DNA MER1_type 0 189 3 312 319 30 22 chr10 79608761 79608896 -60707869 - MIR SINE MIR -8 254 119 240 286 191 25 chr10 79608918 79609117 -60707648 + MIR SINE MIR 9 240 -22 249 351 9 0 chr10 79609336 79609447 -60707318 + L3 LINE CR1 1446 1557 -20 218 213 21 0 chr10 79609454 79609501 -60707264 - MIR3 SINE MIR -51 157 110 564 240 0 0 chr10 79609724 79609903 -60706862 + (TG)n Simple_repeat Simple_repeat 2 180 0 253 220 30 126 chr10 79610585 79610781 -60705984 - MIR3 SINE MIR 0 208 35 529 275 122 28 chr10 79611887 79612188 -60704577 + L2 LINE L2 2688 3026 -287 1419 132 5 5 chr10 79612332 79612545 -60704220 - AluSg/x SINE Alu -3 309 97 201 196 0 0 chr10 79612618 79612664 -60704101 + GA-rich Low_complexity Low_complexity 1 46 0 269 241 330 0 chr10 79612778 79612890 -60703875 - MIR SINE MIR -82 180 32 249 238 61 0 chr10 79613859 79613935 -60702830 + MIR SINE MIR 69 149 -59 265 30 0 0 chr10 79614179 79614212 -60702553 + (TTTTG)n Simple_repeat Simple_repeat 2 120 0 2172 116 0 3 chr10 79614212 79614497 -60702268 - AluSx SINE Alu -1 316 1 246 247 93 41 chr10 79615421 79615518 -60701247 + MIR3 SINE MIR 86 187 -21 501 298 110 23 chr10 79615739 79615817 -60700948 - MIR SINE MIR -25 237 167 2216 123 7 0 chr10 79615817 79616127 -60700638 - AluSx SINE Alu 0 312 1 501 298 110 23 chr10 79616127 79616266 -60700499 - MIR SINE MIR -95 167 1 182 302 0 0 chr10 79617424 79617467 -60699298 - MIR3 SINE MIR -50 158 116 250 301 55 0 chr10 79618067 79618140 -60698625 + L2 LINE L2 3210 3286 -27 207 0 0 0 chr10 79620768 79620791 -60695974 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 204 284 159 23 chr10 79621227 79621315 -60695450 - L2 LINE L2 -2301 1013 914 206 352 80 0 chr10 79621704 79621792 -60694973 + L2 LINE L2 2976 3070 -202 184 319 0 72 chr10 79621944 79622013 -60694752 + L2 LINE L2 3189 3252 -20 409 303 97 48 chr10 79622140 79622627 -60694138 + L2 LINE L2 2543 3055 -217 1763 198 24 3 chr10 79622765 79623098 -60693667 - MER58B DNA MER1_type -1 340 1 263 376 83 0 chr10 79623098 79623207 -60693558 + L2 LINE L2 3148 3265 -7 230 300 0 57 chr10 79623316 79623456 -60693309 - MER103 DNA DNA -34 132 1 750 232 38 22 chr10 79623544 79623729 -60693036 - MER5A DNA MER1_type -1 188 1 1497 216 92 12 chr10 79623878 79624304 -60692461 + MLT1C LTR MaLR 1 460 -7 215 340 38 9 chr10 79625474 79625580 -60691185 + MIR SINE MIR 95 203 -59 391 319 151 0 chr10 79625599 79625765 -60691000 - MIR SINE MIR -13 249 59 288 0 0 0 chr10 79625836 79625868 -60690897 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 235 346 63 44 chr10 79625922 79626127 -60690638 - L2 LINE L2 -78 3194 2986 290 326 72 22 chr10 79626241 79626379 -60690386 + L2 LINE L2 3122 3266 -6 381 93 0 0 chr10 79626379 79626433 -60690332 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 822 237 74 93 chr10 79627161 79627647 -60689118 - LTR33A LTR ERVL -45 478 2 772 323 63 24 chr10 79628220 79628598 -60688167 - L2 LINE L2 -6 3307 2915 240 277 163 59 chr10 79629489 79629691 -60687074 + MIR SINE MIR 37 256 -6 3178 231 35 8 chr10 79630603 79631402 -60685363 - L1MEc LINE L1 -5518 878 58 305 0 50 0 chr10 79631432 79631472 -60685293 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 201 294 211 0 chr10 79631757 79631866 -60684899 - MIR SINE MIR -16 246 115 190 333 36 24 chr10 79633194 79633278 -60683487 + L2 LINE L2 3006 3090 -182 2550 117 17 6 chr10 79633678 79634038 -60682727 - THE1B LTR MaLR 0 364 1 364 270 104 78 chr10 79634222 79634452 -60682313 - L1ME4a LINE L1 -3 6118 5883 1829 124 0 4 chr10 79634468 79634717 -60682048 + AluSq SINE Alu 3 250 -63 666 154 0 51 chr10 79634762 79634879 -60681886 + FRAM SINE Alu 54 164 -12 2602 63 0 13 chr10 79634881 79635196 -60681569 + AluY SINE Alu 1 311 0 573 292 100 65 chr10 79635215 79635705 -60681060 - L1ME4a LINE L1 -14 6107 5601 2266 90 17 0 chr10 79635726 79636016 -60680749 - AluY SINE Alu -16 295 1 617 202 9 0 chr10 79637560 79637669 -60679096 - MER81 DNA DNA 0 114 5 1940 95 8 4 chr10 79638824 79639109 -60677656 - AluSx SINE Alu 0 316 31 568 271 129 12 chr10 79639214 79639610 -60677155 + MLT1K LTR MaLR 10 533 -55 788 265 226 3 chr10 79639679 79639988 -60676777 + L2 LINE L2 2934 3311 -2 756 140 93 7 chr10 79640042 79640192 -60676573 + MER53 DNA DNA 3 165 -24 372 208 275 20 chr10 79641014 79641163 -60675602 - MER5A DNA MER1_type 0 189 3 312 319 30 22 chr10 79641992 79642127 -60674638 - MIR SINE MIR -8 254 119 245 275 197 26 chr10 79642149 79642342 -60674423 + MIR SINE MIR 9 234 -28 249 351 9 0 chr10 79642564 79642675 -60674090 + L3 LINE CR1 1446 1557 -20 218 213 21 0 chr10 79642682 79642729 -60674036 - MIR3 SINE MIR -51 157 110 585 235 0 0 chr10 79642952 79643131 -60673634 + (TG)n Simple_repeat Simple_repeat 2 180 0 253 220 30 126 chr10 79643812 79644008 -60672757 - MIR3 SINE MIR 0 208 35 553 283 127 20 chr10 79645113 79645443 -60671322 + L2 LINE L2 2688 3064 -249 1419 132 5 5 chr10 79645555 79645768 -60670997 - AluSg/x SINE Alu -3 309 97 201 196 0 0 chr10 79645841 79645887 -60670878 + GA-rich Low_complexity Low_complexity 1 46 0 269 241 330 0 chr10 79646001 79646113 -60670652 - MIR SINE MIR -82 180 32 249 238 61 0 chr10 79647082 79647158 -60669607 + MIR SINE MIR 69 149 -59 2193 112 0 3 chr10 79647402 79647720 -60669045 - AluSx SINE Alu 0 317 1 256 235 82 41 chr10 79648644 79648742 -60668023 + MIR3 SINE MIR 86 187 -21 227 222 191 56 chr10 79648754 79648880 -60667885 + MIR3 SINE MIR 43 185 -23 480 303 110 23 chr10 79648963 79649041 -60667724 - MIR SINE MIR -25 237 167 2216 123 7 0 chr10 79649041 79649351 -60667414 - AluSx SINE Alu 0 312 1 480 303 110 23 chr10 79649351 79649490 -60667275 - MIR SINE MIR -95 167 1 182 302 0 0 chr10 79650648 79650691 -60666074 - MIR3 SINE MIR -50 158 116 250 301 55 0 chr10 79651291 79651364 -60665401 + L2 LINE L2 3210 3286 -27 207 0 0 0 chr10 79653990 79654013 -60662752 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 204 284 159 23 chr10 79654449 79654537 -60662228 - L2 LINE L2 -2301 1013 914 206 352 80 0 chr10 79654926 79655014 -60661751 + L2 LINE L2 2976 3070 -202 184 319 0 72 chr10 79655166 79655235 -60661530 + L2 LINE L2 3189 3252 -20 409 303 97 48 chr10 79655372 79655859 -60660906 + L2 LINE L2 2543 3055 -217 1763 198 24 3 chr10 79655997 79656330 -60660435 - MER58B DNA MER1_type -1 340 1 263 376 83 0 chr10 79656330 79656439 -60660326 + L2 LINE L2 3148 3265 -7 230 300 0 57 chr10 79656548 79656688 -60660077 - MER103 DNA DNA -34 132 1 800 222 27 11 chr10 79656776 79656961 -60659804 - MER5A DNA MER1_type -1 188 1 1497 216 92 12 chr10 79657110 79657536 -60659229 + MLT1C LTR MaLR 1 460 -7 215 340 38 9 chr10 79658706 79658812 -60657953 + MIR SINE MIR 95 203 -59 391 319 151 0 chr10 79658831 79658997 -60657768 - MIR SINE MIR -13 249 59 252 0 0 0 chr10 79659068 79659096 -60657669 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 235 346 63 44 chr10 79659149 79659354 -60657411 - L2 LINE L2 -78 3194 2986 290 326 72 22 chr10 79659468 79659606 -60657159 + L2 LINE L2 3122 3266 -6 852 63 0 0 chr10 79659606 79659717 -60657048 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 212 239 230 35 chr10 79660641 79660754 -60656011 + MIR SINE MIR 125 259 -3 966 260 22 0 chr10 79660875 79661106 -60655659 - MIR SINE MIR -4 258 23 659 209 136 5 chr10 79661416 79661607 -60655158 + MER112 DNA MER1_type 6 221 -39 396 274 46 46 chr10 79661888 79662041 -60654724 + MIR SINE MIR 48 200 -62 2257 85 0 14 chr10 79662278 79662612 -60654153 - AluSc SINE Alu 0 330 1 223 216 83 95 chr10 79662682 79662836 -60653929 - MIR3 SINE MIR -43 165 51 1064 176 13 48 chr10 79663823 79664050 -60652715 - MER20 DNA MER1_type 0 219 1 545 224 41 34 chr10 79664122 79664269 -60652496 - MER103 DNA DNA -2 164 17 214 140 0 40 chr10 79664336 79664386 -60652379 + (TA)n Simple_repeat Simple_repeat 2 49 0 212 338 81 15 chr10 79664386 79664522 -60652243 - MIR3 SINE MIR -45 163 19 1254 192 40 119 chr10 79664605 79665110 -60651655 + MER4C LTR ERV1 1 465 0 306 0 0 0 chr10 79666243 79666277 -60650488 + (A)n Simple_repeat Simple_repeat 1 34 0 2198 104 10 0 chr10 79666277 79666566 -60650199 + AluSc SINE Alu 1 292 -17 183 284 63 42 chr10 79667116 79667211 -60649554 - MIR SINE MIR -57 151 55 204 224 0 69 chr10 79667411 79667469 -60649296 + G-rich Low_complexity Low_complexity 6 59 0 2238 133 0 0 chr10 79667712 79668014 -60648751 - AluSx SINE Alu -10 302 1 232 356 56 11 chr10 79669223 79669313 -60647452 - L2 LINE L2 -36 3236 3143 1073 243 63 87 chr10 79669398 79669526 -60647239 + MER113 DNA MER1_type? 1 131 -390 1588 161 70 11 chr10 79669526 79669799 -60646966 - AluJo SINE Alu -23 289 1 1073 243 63 87 chr10 79669799 79670176 -60646589 + MER113 DNA MER1_type? 131 494 -27 186 363 22 0 chr10 79670365 79670456 -60646309 - MIR SINE MIR -111 151 59 476 234 123 32 chr10 79671079 79671233 -60645532 - MIR SINE MIR -35 227 60 360 0 0 0 chr10 79671519 79671559 -60645206 + (CA)n Simple_repeat Simple_repeat 2 41 0 283 269 141 26 chr10 79672420 79672576 -60644189 - MER102a DNA MER1_type 0 330 157 873 189 33 7 chr10 79672627 79672780 -60643985 - FRAM SINE Alu -5 161 5 2218 111 17 0 chr10 79672849 79673147 -60643618 + AluSp SINE Alu 3 305 -8 650 173 115 7 chr10 79673147 79673286 -60643479 - MIR SINE MIR -52 210 57 2075 89 30 0 chr10 79673366 79673637 -60643128 + AluSx SINE Alu 11 289 -23 800 38 28 0 chr10 79673639 79673745 -60643020 + (GAGAA)n Simple_repeat Simple_repeat 4 112 0 326 248 40 30 chr10 79673745 79673846 -60642919 - L1MC4 LINE L1 -17 8025 7924 214 215 108 31 chr10 79674384 79674449 -60642316 + MER91C DNA MER1_type 37 106 -34 213 321 9 46 chr10 79674577 79674686 -60642079 + MIR SINE MIR 23 127 -81 184 315 0 0 chr10 79674715 79674769 -60641996 - L2 LINE L2 -12 3260 3207 634 280 65 10 chr10 79674814 79675014 -60641751 - MIR SINE MIR -40 222 12 2412 80 0 16 chr10 79675370 79675684 -60641081 - AluY SINE Alu -2 309 1 653 247 39 65 chr10 79677010 79677241 -60639524 + MIR SINE MIR 23 247 -15 296 305 29 19 chr10 79678126 79678291 -60638474 + MIR SINE MIR 15 181 -27 888 176 70 0 chr10 79678386 79678613 -60638152 + L1MA4 LINE L1 6057 6299 -1 357 62 0 0 chr10 79679910 79679958 -60636807 + (CA)n Simple_repeat Simple_repeat 1 48 0 240 274 39 84 chr10 79681365 79681544 -60635221 + L2 LINE L2 2866 3036 -236 652 271 103 29 chr10 79681560 79681937 -60634828 + LTR16A LTR ERVL 10 414 -36 221 327 87 0 chr10 79682986 79683090 -60633675 - MIR SINE MIR -33 229 117 2296 87 17 0 chr10 79683369 79683658 -60633107 + AluSg SINE Alu 1 294 -16 573 292 100 65 chr10 79683679 79684169 -60632596 + L1ME4a LINE L1 5601 6107 -14 2602 63 0 13 chr10 79684188 79684503 -60632262 - AluY SINE Alu 0 311 1 666 154 0 51 chr10 79684505 79684622 -60632143 - FRAM SINE Alu -12 164 54 1849 129 0 0 chr10 79684667 79684915 -60631850 - AluSq SINE Alu -63 250 3 364 270 104 78 chr10 79684931 79685161 -60631604 + L1ME4a LINE L1 5883 6118 -3 2550 117 17 6 chr10 79685345 79685705 -60631060 + THE1B LTR MaLR 1 364 0 190 333 36 24 chr10 79686104 79686188 -60630577 - L2 LINE L2 -182 3090 3006 232 282 200 0 chr10 79687519 79687629 -60629136 + MIR SINE MIR 115 246 -16 305 0 50 0 chr10 79687915 79687955 -60628810 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3178 231 35 8 chr10 79687985 79688784 -60627981 + L1MEc LINE L1 58 878 -5518 240 277 163 59 chr10 79689696 79689898 -60626867 - MIR SINE MIR -6 256 37 772 323 63 24 chr10 79690789 79691167 -60625598 + L2 LINE L2 2915 3307 -6 843 238 72 92 chr10 79691740 79692227 -60624538 + LTR33A LTR ERVL 2 478 -45 294 200 57 0 chr10 79692928 79692998 -60623767 - MIR SINE MIR -84 124 51 298 194 14 14 chr10 79693107 79693179 -60623586 + MER116 DNA Mariner 3 74 -6 437 299 45 6 chr10 79693183 79693340 -60623425 - LTR16C LTR ERVL -54 437 275 890 193 62 0 chr10 79693344 79693536 -60623229 - MER3 DNA MER1_type -5 204 1 337 257 53 9 chr10 79693544 79693657 -60623108 - LTR16C LTR ERVL -218 273 156 751 289 19 9 chr10 79694302 79694513 -60622252 + MIR SINE MIR 4 216 -46 1027 194 48 5 chr10 79694520 79694726 -60622039 - MER58A DNA MER1_type -8 216 2 3256 94 38 56 chr10 79694882 79695085 -60621680 + L1PB4 LINE L1 5573 5778 -378 276 100 0 0 chr10 79695085 79695125 -60621640 + (CA)n Simple_repeat Simple_repeat 2 41 0 3256 94 38 56 chr10 79695125 79695386 -60621379 + L1PB4 LINE L1 5778 6028 -128 2317 108 0 0 chr10 79695386 79695683 -60621082 + AluSq SINE Alu 1 297 -16 3256 94 38 56 chr10 79695683 79695790 -60620975 + L1PB4 LINE L1 6028 6135 -21 458 279 47 16 chr10 79695945 79696074 -60620691 - MIR3 SINE MIR -39 169 37 512 252 3 3 chr10 79696548 79696887 -60619878 + (CA)n Simple_repeat Simple_repeat 1 339 0 225 284 0 12 chr10 79696888 79697059 -60619706 + (CATA)n Simple_repeat Simple_repeat 1 168 0 182 160 0 100 chr10 79697896 79697946 -60618819 + MIR SINE MIR 108 152 -110 408 252 211 0 chr10 79698506 79698653 -60618112 + MER5A DNA MER1_type 10 187 -2 376 292 8 33 chr10 79698653 79698764 -60618001 + MIR SINE MIR 29 136 -72 22 0 0 0 chr10 79699017 79699039 -60617726 + AT_rich Low_complexity Low_complexity 1 22 0 394 326 15 0 chr10 79699134 79699269 -60617496 - MIR3 SINE MIR -37 171 35 840 304 4 13 chr10 79700020 79700247 -60616518 + MIR SINE MIR 32 256 -6 304 275 44 11 chr10 79700375 79700466 -60616299 + MER91C DNA MER1_type 25 118 -22 185 211 0 0 chr10 79700781 79700819 -60615946 + L2 LINE L2 3181 3218 -95 415 247 108 59 chr10 79700980 79701166 -60615599 - L2 LINE L2 0 3313 3119 184 289 10 10 chr10 79701469 79701566 -60615199 + GA-rich Low_complexity Low_complexity 1 97 0 1645 125 0 12 chr10 79702555 79702795 -60613970 - AluSg/x SINE Alu 0 312 76 478 226 96 41 chr10 79702829 79702907 -60613858 + MIR SINE MIR 28 100 -162 2129 134 12 77 chr10 79702907 79703324 -60613441 + MLT1B LTR MaLR 1 390 0 478 226 96 41 chr10 79703324 79703391 -60613374 + MIR SINE MIR 100 181 -81 196 268 0 0 chr10 79703395 79703436 -60613329 + L2 LINE L2 3221 3261 -11 226 107 90 25 chr10 79705545 79705667 -60611098 + (CA)n Simple_repeat Simple_repeat 2 131 0 283 102 78 36 chr10 79705685 79705852 -60610913 + (CA)n Simple_repeat Simple_repeat 1 174 0 304 103 64 26 chr10 79705855 79705933 -60610832 + (CACAA)n Simple_repeat Simple_repeat 4 84 0 329 104 75 35 chr10 79705943 79706116 -60610649 + (CA)n Simple_repeat Simple_repeat 1 180 0 475 150 35 40 chr10 79706154 79706646 -60610119 + (CA)n Simple_repeat Simple_repeat 1 489 0 372 131 15 51 chr10 79706726 79706863 -60609902 + (CA)n Simple_repeat Simple_repeat 1 132 0 492 134 11 53 chr10 79706888 79707075 -60609690 + (CA)n Simple_repeat Simple_repeat 1 179 0 557 313 97 23 chr10 79707885 79708278 -60608487 + L3 LINE CR1 1152 1573 -4 1990 173 21 13 chr10 79708765 79709146 -60607619 + MLT1B LTR MaLR 1 384 -6 245 337 58 35 chr10 79709309 79709481 -60607284 + MIR3 SINE MIR 18 193 -15 325 157 0 0 chr10 79710092 79710143 -60606622 - MIR SINE MIR -108 154 104 459 331 51 6 chr10 79710320 79710477 -60606288 - MIR3 SINE MIR -3 205 42 245 298 0 105 chr10 79711398 79711522 -60605243 - L2 LINE L2 -8 3264 3154 242 320 90 60 chr10 79711576 79711776 -60604989 + MIR SINE MIR 20 225 -37 495 280 24 30 chr10 79712021 79712189 -60604576 + MER117 DNA MER1_type 2 168 -29 205 309 165 0 chr10 79713042 79713139 -60603626 - MIR3 SINE MIR -7 201 89 397 285 158 11 chr10 79713334 79713702 -60603063 + L1ME4a LINE L1 5691 6112 -9 308 307 100 0 chr10 79714105 79714245 -60602520 - MIR SINE MIR -35 227 74 2259 82 7 33 chr10 79715380 79715684 -60601081 + AluSx SINE Alu 1 296 -16 198 167 0 0 chr10 79715700 79715736 -60601029 + (CA)n Simple_repeat Simple_repeat 1 36 0 2406 91 0 3 chr10 79716045 79716352 -60600413 + AluY SINE Alu 1 306 -5 297 221 150 44 chr10 79716359 79716472 -60600293 - MIR SINE MIR -33 229 105 287 232 12 0 chr10 79717456 79717538 -60599227 + CT-rich Low_complexity Low_complexity 3 85 0 474 18 0 0 chr10 79717539 79717594 -60599171 + (CA)n Simple_repeat Simple_repeat 1 55 0 557 299 28 17 chr10 79719002 79719179 -60597586 - MIR SINE MIR -32 230 52 682 254 16 11 chr10 79719205 79719390 -60597375 - MER5A DNA MER1_type -3 186 1 278 230 207 11 chr10 79719828 79719915 -60596850 - Charlie7 DNA MER1_type -2508 104 1 460 366 30 4 chr10 79720855 79721090 -60595675 + MIR SINE MIR 22 262 0 201 239 197 26 chr10 79722149 79722266 -60594499 + L2 LINE L2 3168 3304 -9 693 226 73 6 chr10 79722342 79722519 -60594246 + MER5A DNA MER1_type 1 189 0 689 134 29 129 chr10 79723686 79723857 -60592908 - MER53 DNA DNA 0 189 41 2232 111 0 10 chr10 79723857 79724191 -60592574 - AluSq SINE Alu 0 313 1 689 134 29 129 chr10 79724191 79724228 -60592537 - MER53 DNA DNA -148 41 2 307 275 20 81 chr10 79724430 79724516 -60592249 + MIR3 SINE MIR 60 135 -73 911 170 192 0 chr10 79724516 79724698 -60592067 - MER20 DNA MER1_type 0 219 3 307 275 20 81 chr10 79724698 79724760 -60592005 + MIR3 SINE MIR 135 199 -9 358 255 149 0 chr10 79725149 79725243 -60591522 - MIR SINE MIR -71 191 84 180 212 0 0 chr10 79725585 79725618 -60591147 - MIR SINE MIR -61 147 115 366 23 0 0 chr10 79726264 79726307 -60590458 + (CA)n Simple_repeat Simple_repeat 1 43 0 333 336 66 0 chr10 79726998 79727135 -60589630 - MIR SINE MIR -12 250 105 323 267 302 12 chr10 79727167 79727339 -60589426 + MIR SINE MIR 20 241 -21 406 268 207 10 chr10 79727396 79727594 -60589171 - MIR SINE MIR -10 252 16 201 220 60 20 chr10 79728446 79728496 -60588269 + MIR SINE MIR 96 147 -61 2283 153 77 25 chr10 79729243 79729687 -60587078 - MLT1C LTR MaLR 0 467 1 2563 68 0 3 chr10 79730867 79731176 -60585589 + AluY SINE Alu 1 308 -3 355 245 50 58 chr10 79731227 79731366 -60585399 - MIR SINE MIR -60 202 65 591 326 70 4 chr10 79733412 79733639 -60583126 + MIR SINE MIR 7 248 -14 313 273 152 0 chr10 79733943 79734042 -60582723 - L1MC4 LINE L1 -1318 6724 6611 234 261 97 37 chr10 79734258 79734392 -60582373 + HAL1b LINE L1 633 774 -574 435 300 27 37 chr10 79734641 79734927 -60581838 + L1MEc LINE L1 2142 2381 -3834 746 146 0 0 chr10 79734931 79735041 -60581724 + FLAM_C SINE Alu 14 123 -20 554 191 197 14 chr10 79735466 79735613 -60581152 + MER5A DNA MER1_type 14 187 -2 527 273 83 37 chr10 79735624 79735840 -60580925 + MIR SINE MIR 18 243 -19 287 312 32 24 chr10 79736521 79736646 -60580119 - MIR3 SINE MIR -2 206 81 642 224 25 25 chr10 79737220 79737381 -60579384 + MIR SINE MIR 48 208 -54 794 189 0 8 chr10 79737523 79737655 -60579110 + FLAM_A SINE Alu 1 131 -2 198 329 71 14 chr10 79738213 79738283 -60578482 - L2 LINE L2 -36 3277 3204 954 179 0 43 chr10 79739130 79739314 -60577451 - FRAM SINE Alu 0 176 1 225 288 15 15 chr10 79739858 79739924 -60576841 - L2 LINE L2 -1 3271 3206 275 378 63 14 chr10 79740298 79740520 -60576245 - L2 LINE L2 -530 2784 2552 498 155 0 50 chr10 79741039 79741220 -60575545 + GA-rich Low_complexity Low_complexity 2 173 0 203 43 0 130 chr10 79741233 79741279 -60575486 + (GA)n Simple_repeat Simple_repeat 2 41 0 429 103 0 86 chr10 79741299 79741393 -60575372 + (GA)n Simple_repeat Simple_repeat 2 86 -21 288 0 0 0 chr10 79741393 79741425 -60575340 + (TG)n Simple_repeat Simple_repeat 2 33 0 429 103 0 86 chr10 79741425 79741446 -60575319 + (GA)n Simple_repeat Simple_repeat 86 107 0 946 280 20 26 chr10 79742296 79742639 -60574126 + L1ME4a LINE L1 5523 5863 -258 1644 196 3 32 chr10 79742721 79743037 -60573728 - AluJb SINE Alu -5 307 1 298 130 0 0 chr10 79743056 79743110 -60573655 - L1MB4 LINE L1 -1 6179 6126 288 77 0 0 chr10 79743112 79743151 -60573614 + (T)n Simple_repeat Simple_repeat 1 39 0 286 220 0 0 chr10 79743177 79743236 -60573529 - FLAM_A SINE Alu 0 133 75 3326 155 25 28 chr10 79743236 79743630 -60573135 - L1MB3 LINE L1 -57 6126 5732 363 32 32 32 chr10 79743630 79743692 -60573073 + (TTG)n Simple_repeat Simple_repeat 2 63 0 2050 112 11 0 chr10 79743693 79743970 -60572795 - AluSx SINE Alu -32 280 1 3326 155 25 28 chr10 79743970 79744251 -60572514 - L1MB3 LINE L1 -450 5733 5451 283 297 64 22 chr10 79744650 79744798 -60571967 + MIR SINE MIR 20 175 -63 1235 139 5 34 chr10 79745164 79745373 -60571392 + AluJo SINE Alu 102 304 -8 1066 158 27 0 chr10 79745639 79745823 -60570942 - MER5A DNA MER1_type 0 189 1 749 309 27 23 chr10 79745966 79746225 -60570540 + MIR SINE MIR 3 262 0 1142 179 67 128 chr10 79746332 79746723 -60570042 - MER83 LTR ERV1 -27 421 55 736 50 20 0 chr10 79746734 79746834 -60569931 - MER83 LTR ERV1 -346 102 1 * 1420 158 87 42 chr10 79746834 79747144 -60569621 + MER44D DNA MER2_type 6 599 -10 1502 118 9 0 chr10 79747149 79747378 -60569387 + MLT1B LTR MaLR 72 302 -88 632 273 101 44 chr10 79747418 79747955 -60568810 + L2 LINE L2 2583 3144 -169 454 256 52 71 chr10 79749791 79750002 -60566763 - Charlie8 DNA MER1_type -2209 208 2 226 295 64 89 chr10 79750268 79750549 -60566216 + L2 LINE L2 2967 3240 -32 197 350 57 24 chr10 79750583 79750706 -60566059 - L2 LINE L2 -12 3260 3134 520 273 226 21 chr10 79750739 79751120 -60565645 + L2 LINE L2 2855 3313 0 485 231 108 89 chr10 79752287 79752556 -60564209 - L2 LINE L2 -1 3312 3039 * 721 328 50 29 chr10 79752553 79752931 -60563834 + L2 LINE L2 2901 3286 -27 272 206 206 37 chr10 79753155 79753262 -60563503 + MIR SINE MIR 25 149 -59 225 268 27 44 chr10 79754829 79755012 -60561753 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 236 242 48 19 chr10 79755243 79755381 -60561384 + MIR SINE MIR 83 262 0 340 287 52 37 chr10 79755918 79756054 -60560711 - L2 LINE L2 -272 3041 2904 683 278 19 53 chr10 79756259 79756522 -60560243 + MIR SINE MIR 8 261 -1 2169 105 3 11 chr10 79756745 79757060 -60559705 + AluSx SINE Alu 1 313 0 216 339 14 119 chr10 79757828 79758114 -60558651 + L2 LINE L2 3004 3259 -13 262 216 69 26 chr10 79758476 79758592 -60558173 + L1ME3A LINE L1 6049 6169 -1 2352 80 68 6 chr10 79758592 79758943 -60557822 + L1MA1 LINE L1 5922 6294 -8 517 237 8 8 chr10 79760453 79760571 -60556194 + MIR3 SINE MIR 87 204 -4 793 327 68 21 chr10 79760704 79761187 -60555578 + MLT1L LTR MaLR 106 611 -4 258 224 66 0 chr10 79761663 79761739 -60555026 + CT-rich Low_complexity Low_complexity 4 84 0 204 150 25 0 chr10 79762437 79762477 -60554288 + CT-rich Low_complexity Low_complexity 1 41 0 195 100 0 0 chr10 79762541 79762571 -60554194 + (GA)n Simple_repeat Simple_repeat 2 31 0 700 239 12 6 chr10 79762812 79762975 -60553790 + MIR SINE MIR 21 184 -78 2040 222 81 2 chr10 79763100 79763178 -60553587 + L1MB5 LINE L1 5587 5657 -517 2389 98 3 3 chr10 79763178 79763485 -60553280 + AluSx SINE Alu 1 307 -5 2040 222 81 2 chr10 79763485 79763951 -60552814 + L1MB5 LINE L1 5657 6174 0 241 274 144 91 chr10 79764071 79764433 -60552332 + L2 LINE L2 2843 3223 -49 244 283 122 28 chr10 79764804 79764939 -60551826 - MIR SINE MIR -65 143 12 313 273 58 122 chr10 79765103 79765308 -60551457 + MIR3 SINE MIR 3 194 -14 262 335 87 29 chr10 79765869 79766042 -60550723 - MIR SINE MIR -67 195 13 261 284 21 71 chr10 79766584 79766725 -60550040 - MIR3 SINE MIR -15 193 60 327 362 9 0 chr10 79767563 79767668 -60549097 - MIR SINE MIR -56 152 47 293 384 38 0 chr10 79768168 79768301 -60548464 + MIR3 SINE MIR 3 140 -68 355 246 131 11 chr10 79768992 79769154 -60547611 + L1ME LINE L1 5646 5818 -303 189 304 0 18 chr10 79769431 79769487 -60547278 + MIR SINE MIR 18 72 -136 909 166 0 0 chr10 79769492 79769649 -60547116 + L1MA4 LINE L1 6029 6185 -115 5201 133 11 0 chr10 79770213 79771038 -60545727 + L1MA4 LINE L1 5461 6294 -6 568 278 36 56 chr10 79771309 79771566 -60545199 - MIR SINE MIR 0 262 12 360 216 0 26 chr10 79772820 79773097 -60543668 + (CA)n Simple_repeat Simple_repeat 1 269 0 462 270 51 7 chr10 79773337 79773474 -60543291 + MIR SINE MIR 28 170 -92 198 293 136 57 chr10 79774054 79774194 -60542571 - MIR SINE MIR -70 192 42 202 273 0 0 chr10 79775155 79775199 -60541566 - MIR SINE MIR -1 261 218 2032 114 0 14 chr10 79775570 79775867 -60540898 + AluSx SINE Alu 1 293 -19 376 271 97 54 chr10 79775867 79776258 -60540507 + L1MEc LINE L1 2062 2413 -3802 416 316 82 12 chr10 79776261 79776432 -60540333 - MIR SINE MIR -79 183 1 717 237 6 23 chr10 79776564 79776741 -60540024 + MER5B DNA MER1_type 4 177 -1 1282 199 38 15 chr10 79776842 79777138 -60539627 + MLT1A1 LTR MaLR 1 365 0 220 189 0 0 chr10 79777265 79777302 -60539463 - L3b LINE CR1 -5 1578 1542 353 292 14 28 chr10 79777310 79777454 -60539311 - MER5B DNA MER1_type -1 177 36 450 101 0 0 chr10 79777858 79777927 -60538838 + (TC)n Simple_repeat Simple_repeat 1 69 0 956 265 145 20 chr10 79778590 79779002 -60537763 + HAL1b LINE L1 726 1216 -132 360 0 0 0 chr10 79779002 79779042 -60537723 + (TG)n Simple_repeat Simple_repeat 1 40 0 956 265 145 20 chr10 79779042 79779139 -60537626 + HAL1b LINE L1 1216 1299 -49 218 261 110 86 chr10 79779195 79779440 -60537325 - L3 LINE CR1 0 1577 1327 509 255 31 56 chr10 79779465 79779661 -60537104 - MIR SINE MIR -69 193 3 495 253 30 59 chr10 79779661 79779841 -60536924 - L3 LINE CR1 -193 1384 1211 233 125 0 21 chr10 79781096 79781144 -60535621 + (TCC)n Simple_repeat Simple_repeat 1 47 0 1057 189 31 44 chr10 79782655 79782882 -60533883 + MER58A DNA MER1_type 1 224 0 470 275 14 16 chr10 79783480 79783639 -60533126 + MIR SINE MIR 6 143 -65 603 220 7 43 chr10 79783653 79783794 -60532971 - L2 LINE L2 -2 3311 3176 308 278 35 52 chr10 79783947 79784062 -60532703 - MIR SINE MIR -39 223 111 214 289 0 13 chr10 79785001 79785077 -60531688 + GA-rich Low_complexity Low_complexity 3 77 0 878 147 0 0 chr10 79785853 79785982 -60530783 - FLAM_A SINE Alu -4 129 1 210 260 20 0 chr10 79786281 79786331 -60530434 - MIR3 SINE MIR -54 154 104 648 287 37 19 chr10 79787122 79787338 -60529427 + MIR SINE MIR 16 235 -27 2010 117 40 0 chr10 79787618 79787918 -60528847 + AluSx SINE Alu 1 312 0 194 184 158 26 chr10 79788689 79788711 -60528054 + L3 LINE CR1 258 289 -1288 354 320 25 43 chr10 79788711 79788895 -60527870 - MER5A DNA MER1_type -3 186 1 2056 135 3 3 chr10 79789166 79789478 -60527287 + AluSq SINE Alu 1 312 -1 363 275 94 8 chr10 79790891 79791074 -60525691 + MIR SINE MIR 1 200 -62 2116 122 10 0 chr10 79791075 79791378 -60525387 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 79792401 79792422 -60524343 + AT_rich Low_complexity Low_complexity 1 21 0 1753 106 15 19 chr10 79792497 79792761 -60524004 - AluSq SINE Alu -10 303 41 189 278 153 0 chr10 79792950 79793022 -60523743 - MIR SINE MIR -71 191 109 2006 105 0 25 chr10 79794747 79795032 -60521733 + AluSg SINE Alu 1 278 -32 195 42 0 0 chr10 79795036 79795060 -60521705 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 630 270 90 9 chr10 79795063 79795285 -60521480 - MER112 DNA MER1_type -20 240 1 248 246 236 9 chr10 79795285 79795395 -60521370 - MIR3 SINE MIR -48 160 26 208 309 59 0 chr10 79796008 79796076 -60520689 - MIR SINE MIR -1 261 190 606 286 73 15 chr10 79796181 79796387 -60520378 - MIR SINE MIR -43 219 2 475 307 17 34 chr10 79796768 79796947 -60519818 - MIR3 SINE MIR -8 200 25 349 229 201 62 chr10 79798706 79798885 -60517880 + MIR SINE MIR 59 262 0 1927 130 0 33 chr10 79799142 79799443 -60517322 + AluSx SINE Alu 1 291 -21 535 291 56 34 chr10 79800369 79800603 -60516162 + MIR SINE MIR 12 250 -12 223 341 74 0 chr10 79800745 79800880 -60515885 - L3 LINE CR1 -243 1334 1190 232 236 40 0 chr10 79801693 79801821 -60514944 + GA-rich Low_complexity Low_complexity 1 133 0 22 0 0 0 chr10 79802631 79802653 -60514112 + AT_rich Low_complexity Low_complexity 1 22 0 1164 165 21 135 chr10 79802661 79802807 -60513958 + AluYb8 SINE Alu 1 87 -231 17425 27 0 0 chr10 79802807 79805602 -60511163 + L1PA3 LINE L1 3361 6155 0 1164 165 21 135 chr10 79805602 79805795 -60510970 + AluYb8 SINE Alu 87 301 -17 458 224 110 55 chr10 79805902 79806139 -60510626 - L1MEd LINE L1 -5189 930 681 528 218 0 8 chr10 79806278 79806402 -60510363 + L1PB3 LINE L1 6031 6153 -1 1141 264 11 9 chr10 79806675 79807024 -60509741 + THE1A LTR MaLR 3 352 -3 204 242 211 16 chr10 79858001 79858129 -60458636 - MIR SINE MIR -6 256 104 233 226 151 32 chr10 79858418 79858511 -60458254 - MIR SINE MIR -79 183 80 2199 116 0 0 chr10 79859163 79859478 -60457287 + AluSx SINE Alu 1 315 0 780 186 0 0 chr10 79859643 79859772 -60456993 + FLAM_C SINE Alu 13 141 -2 264 289 36 0 chr10 79859773 79859856 -60456909 + GA-rich Low_complexity Low_complexity 1 86 0 298 247 37 0 chr10 79861469 79861550 -60455215 - L1ME LINE L1 -523 5647 5564 2061 134 3 3 chr10 79861696 79861995 -60454770 + AluY SINE Alu 1 299 -12 768 193 0 0 chr10 79862032 79862167 -60454598 + FRAM SINE Alu 40 174 -2 2144 140 7 0 chr10 79862245 79862552 -60454213 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr10 79862555 79862576 -60454189 + AT_rich Low_complexity Low_complexity 1 21 0 1538 241 96 13 chr10 79862576 79863024 -60453741 - MLT1J LTR MaLR -24 487 3 1989 122 14 0 chr10 79863154 79863460 -60453305 - AluSq SINE Alu 0 313 4 2010 112 61 0 chr10 79863580 79863858 -60452907 - AluSx SINE Alu -17 295 1 909 213 0 0 chr10 79863880 79864040 -60452725 - FRAM SINE Alu -16 160 1 1837 151 27 20 chr10 79864050 79864349 -60452416 - AluJb SINE Alu -11 301 1 551 194 0 90 chr10 79864349 79864444 -60452321 - L1M3 LINE L1 -576 5607 5528 2631 55 0 3 chr10 79864444 79864752 -60452013 + AluY SINE Alu 1 307 -4 551 194 0 90 chr10 79864752 79864800 -60451965 - L1M3 LINE L1 -655 5528 5477 1762 173 3 17 chr10 79864820 79865120 -60451645 - AluJo SINE Alu -16 296 1 2076 130 3 13 chr10 79865160 79865468 -60451297 - AluJb SINE Alu -7 305 1 560 229 91 48 chr10 79866679 79866792 -60449973 - HAL1 LINE L1 0 2507 2400 2361 101 0 10 chr10 79866792 79867100 -60449665 - AluSx SINE Alu -7 305 1 560 229 91 48 chr10 79867100 79867217 -60449548 - HAL1 LINE L1 -107 2400 2267 1220 219 161 48 chr10 79867221 79867519 -60449246 - HAL1 LINE L1 -282 2225 1962 2220 122 0 3 chr10 79867519 79867823 -60448942 + AluSq SINE Alu 1 303 -10 1220 219 161 48 chr10 79867823 79868089 -60448676 - HAL1 LINE L1 -545 1962 1597 1295 52 0 0 chr10 79868089 79868242 -60448523 + AluY SINE Alu 157 309 -2 988 208 85 41 chr10 79868242 79868277 -60448488 - HAL1 LINE L1 -899 1608 1576 1957 144 45 3 chr10 79868277 79868569 -60448196 + AluSx SINE Alu 1 304 -8 988 208 85 41 chr10 79868569 79868826 -60447939 - HAL1 LINE L1 -931 1576 1303 545 40 13 53 chr10 79868826 79868837 -60447928 - AluSg/x SINE Alu -22 287 277 217 0 0 0 chr10 79868837 79868861 -60447904 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 545 40 13 53 chr10 79868861 79868925 -60447840 - AluSg/x SINE Alu -32 277 215 919 94 8 0 chr10 79869032 79869159 -60447606 + AluSp/q SINE Alu 184 339 0 187 71 0 0 chr10 79869159 79869187 -60447578 + (CAAAAA)n Simple_repeat Simple_repeat 1 180 0 205 284 30 15 chr10 79869278 79869345 -60447420 - L2 LINE L2 -212 3060 2993 479 200 33 0 chr10 79869495 79869585 -60447180 - FLAM_A SINE Alu -22 120 28 820 109 23 8 chr10 79869790 79869918 -60446847 - FLAM_C SINE Alu -13 130 1 294 287 53 11 chr10 79870035 79870129 -60446636 - L2 LINE L2 -4 3309 3212 440 216 72 43 chr10 79870303 79870442 -60446323 - MIR SINE MIR -103 159 17 576 304 48 14 chr10 79870451 79870658 -60446107 - MIR SINE MIR -14 248 35 1512 174 21 7 chr10 79870889 79871177 -60445588 + AluJo SINE Alu 5 296 -16 1697 137 40 20 chr10 79871180 79871315 -60445450 + AluSx SINE Alu 1 132 -180 2424 75 3 0 chr10 79871315 79871620 -60445145 + AluSp SINE Alu 1 306 -7 1697 137 40 20 chr10 79871620 79871784 -60444981 + AluSx SINE Alu 132 306 -6 2310 80 0 13 chr10 79871786 79872100 -60444665 + AluSx SINE Alu 1 310 -2 279 79 0 0 chr10 79872501 79872539 -60444226 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 1683 187 10 3 chr10 79872539 79872849 -60443916 - AluJb SINE Alu 0 312 1 425 213 65 9 chr10 79872852 79872960 -60443805 + MIR SINE MIR 92 205 -57 705 182 7 52 chr10 79873835 79873989 -60442776 - L2 LINE L2 0 3313 3167 2012 116 0 0 chr10 79873997 79874273 -60442492 + AluSq SINE Alu 1 276 -37 223 346 60 23 chr10 79874627 79874760 -60442005 - MIR3 SINE MIR -54 154 17 1886 160 0 22 chr10 79875161 79875479 -60441286 - AluSx SINE Alu -1 311 1 965 130 120 0 chr10 79875740 79875932 -60440833 + MER33 DNA MER1_type 20 234 -90 1304 171 0 5 chr10 79875944 79876155 -60440610 - AluJo SINE Alu -102 210 1 2066 128 0 7 chr10 79876180 79876485 -60440280 + AluSx SINE Alu 1 303 -9 281 328 33 41 chr10 79876555 79876677 -60440088 + L2 LINE L2 3149 3269 -3 1417 224 132 22 chr10 79876945 79877400 -60439365 + MLT1J LTR MaLR 4 508 -3 1015 144 82 15 chr10 79877529 79877724 -60439041 - AluJb SINE Alu -19 293 86 1323 110 0 0 chr10 79877907 79878098 -60438667 - AluSc SINE Alu -118 191 1 1025 152 47 0 chr10 79878125 79878296 -60438469 + AluSg/x SINE Alu 123 301 -11 1257 126 73 0 chr10 79878299 79878505 -60438260 + AluJb SINE Alu 86 306 -6 459 183 0 0 chr10 79878561 79878632 -60438133 + AluSp/q SINE Alu 223 293 -20 3169 170 10 22 chr10 79878640 79879227 -60437538 + L1MB8 LINE L1 5433 6012 -166 3377 95 13 7 chr10 79879241 79879705 -60437060 - Charlie3 DNA MER1_type -4 2706 2240 * 3401 124 4 22 chr10 79879697 79880196 -60436569 - Charlie3 DNA MER1_type -2220 490 1 839 154 0 6 chr10 79880199 79880355 -60436410 + L1MB8 LINE L1 6024 6178 0 1885 105 43 23 chr10 79880512 79880816 -60435949 + AluSg SINE Alu 1 310 0 821 233 0 0 chr10 79880837 79881009 -60435756 + FRAM SINE Alu 1 170 -6 1946 191 126 30 chr10 79881213 79881721 -60435044 + MER74A LTR ERVL 1 557 -1 1398 157 15 80 chr10 79881760 79881911 -60434854 + AluJb SINE Alu 1 121 -191 2072 126 7 7 chr10 79881911 79882213 -60434552 + AluSx SINE Alu 1 302 -10 1398 157 15 80 chr10 79882213 79882386 -60434379 + AluJb SINE Alu 121 304 -8 504 316 107 0 chr10 79882456 79882633 -60434132 + MER91A DNA MER1_type 1 196 0 2734 137 62 19 chr10 79882877 79883358 -60433407 + L1MB3 LINE L1 5675 6176 -7 1857 140 7 0 chr10 79883455 79883748 -60433017 + AluSx SINE Alu 1 295 -17 1823 156 3 3 chr10 79883969 79884276 -60432489 - AluJb SINE Alu -5 307 1 424 237 7 89 chr10 79884479 79884614 -60432151 - LTR67 LTR ERVL 0 557 434 486 336 61 5 chr10 79884992 79885206 -60431559 - MIR SINE MIR -8 254 29 2221 94 3 0 chr10 79885213 79885512 -60431253 + AluSg SINE Alu 1 300 -10 1729 147 46 7 chr10 79885799 79886084 -60430681 + AluSx SINE Alu 1 296 -16 236 288 12 0 chr10 79886181 79886261 -60430504 + L1MEc LINE L1 99 179 -6217 581 255 7 9 chr10 79886447 79886597 -60430168 + L1ME1 LINE L1 6013 6168 -16 1889 150 3 0 chr10 79886597 79886897 -60429868 - AluJb SINE Alu -11 301 1 581 255 7 9 chr10 79886897 79886909 -60429856 + L1ME1 LINE L1 6168 6179 -5 1469 214 0 3 chr10 79887102 79887401 -60429364 - AluJb SINE Alu -14 298 1 1583 200 3 7 chr10 79887412 79887707 -60429058 - AluSx SINE Alu -18 294 1 2139 235 132 65 chr10 79887965 79888271 -60428494 + HAL1 LINE L1 122 406 -2101 1851 145 0 0 chr10 79888271 79888573 -60428192 + AluSx SINE Alu 1 302 0 2139 235 132 65 chr10 79888573 79888782 -60427983 + HAL1 LINE L1 406 600 -1907 230 0 33 0 chr10 79888782 79888812 -60427953 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2139 235 132 65 chr10 79888812 79889113 -60427652 + HAL1 LINE L1 600 1004 -1503 1621 122 12 4 chr10 79889113 79889392 -60427373 + AluSx SINE Alu 33 313 0 2139 235 132 65 chr10 79889392 79889435 -60427330 + HAL1 LINE L1 1004 1043 -1464 527 160 0 0 chr10 79889466 79889541 -60427224 - 7SLRNA srpRNA srpRNA -22 298 224 323 158 107 57 chr10 79889697 79889726 -60427039 + HsTC2 DNA Tc2 39 65 -1833 1998 136 0 0 chr10 79889726 79890021 -60426744 - AluSg SINE Alu -15 295 1 323 158 107 57 chr10 79890021 79890050 -60426715 + HsTC2 DNA Tc2 65 91 -1807 1619 174 17 7 chr10 79890050 79890344 -60426421 - AluJb SINE Alu -11 301 5 323 158 107 57 chr10 79890344 79890432 -60426333 + HsTC2 DNA Tc2 91 1895 -3 1510 147 10 73 chr10 79890779 79891079 -60425686 - AluJb SINE Alu -16 296 16 34 0 0 0 chr10 79891183 79891217 -60425548 + AT_rich Low_complexity Low_complexity 1 34 0 1278 190 16 45 chr10 79891349 79891509 -60425256 - AluJo SINE Alu -11 301 153 2025 132 0 0 chr10 79891509 79891804 -60424961 - AluSx SINE Alu -13 299 5 1278 190 16 45 chr10 79891804 79891953 -60424812 - AluJo SINE Alu -159 153 1 878 200 6 0 chr10 79892426 79892586 -60424179 + FAM SINE Alu 8 168 -17 2063 112 17 3 chr10 79892616 79892912 -60423853 + AluSx SINE Alu 1 300 -12 373 235 0 20 chr10 79892913 79893015 -60423750 - L1MC5 LINE L1 -54 7907 7808 412 272 60 74 chr10 79893040 79893257 -60423508 - L1MC5 LINE L1 -218 7743 7530 340 253 50 71 chr10 79893257 79893455 -60423310 - L1MC5 LINE L1 -741 7220 7027 24 0 0 0 chr10 79893506 79893530 -60423235 + AT_rich Low_complexity Low_complexity 1 24 0 1866 116 43 0 chr10 79893535 79893812 -60422953 + AluSg SINE Alu 1 289 -21 268 273 43 36 chr10 79893873 79894012 -60422753 - L1MC4 LINE L1 -962 7080 6941 1649 101 0 0 chr10 79894060 79894279 -60422486 - AluSg/x SINE Alu -9 301 83 1986 138 0 0 chr10 79895221 79895518 -60421247 + AluJb SINE Alu 6 302 -10 608 198 0 72 chr10 79895849 79896056 -60420709 - AluJb SINE Alu -118 194 3 311 186 32 129 chr10 79897321 79897445 -60419320 + L1ME LINE L1 5591 5702 -419 2117 122 0 0 chr10 79897667 79897962 -60418803 + AluSp SINE Alu 1 295 -18 1902 134 10 0 chr10 79897970 79898261 -60418504 + AluSx SINE Alu 1 294 -18 1621 161 16 20 chr10 79898294 79898624 -60418141 + AluJo SINE Alu 5 312 0 802 169 0 22 chr10 79898647 79898783 -60417982 + FLAM_C SINE Alu 1 133 0 1914 133 3 26 chr10 79898877 79899186 -60417579 + AluSx SINE Alu 1 302 -10 578 247 0 0 chr10 79901020 79901117 -60415648 + G-rich Low_complexity Low_complexity 1 97 0 522 192 41 0 chr10 79901118 79901264 -60415501 + A-rich Low_complexity Low_complexity 5 156 0 1770 140 7 3 chr10 79901415 79901707 -60415058 + AluJb SINE Alu 2 294 -18 2072 130 0 0 chr10 79901800 79902101 -60414664 - AluSx SINE Alu -11 301 1 230 226 151 32 chr10 79902753 79902846 -60413919 + MIR SINE MIR 80 183 -79 200 242 211 16 chr10 79903135 79903263 -60413502 + MIR SINE MIR 104 256 -6 22 56 0 0 chr10 79904266 79904302 -60412463 + AT_rich Low_complexity Low_complexity 1 36 0 2067 106 0 26 chr10 79905127 79905430 -60411335 + AluSg SINE Alu 1 295 -15 1123 100 0 0 chr10 79905456 79905606 -60411159 - AluY SINE Alu -161 150 1 608 311 240 12 chr10 79905625 79906062 -60410703 + L2 LINE L2 2778 3313 0 * 837 303 92 36 chr10 79906050 79906625 -60410140 - L2 LINE L2 -914 2400 1794 808 132 0 23 chr10 79906949 79907078 -60409687 - AluSq/x SINE Alu -186 127 2 309 316 101 7 chr10 79907605 79907757 -60409008 + MIR3 SINE MIR 8 176 -32 21 0 0 0 chr10 79908059 79908080 -60408685 + AT_rich Low_complexity Low_complexity 1 21 0 2256 109 0 0 chr10 79908085 79908388 -60408377 + AluSx SINE Alu 1 303 -9 1442 158 26 53 chr10 79908393 79908697 -60408068 + AluJo SINE Alu 1 296 -16 2294 86 0 0 chr10 79908700 79909003 -60407762 + AluY SINE Alu 1 303 -8 6469 172 24 6 chr10 79909310 79910389 -60406376 + MSTA-int LTR MaLR 553 1651 0 2013 144 79 53 chr10 79910389 79910566 -60406199 + MSTA LTR MaLR 1 172 -256 2184 86 10 0 chr10 79910566 79910857 -60405908 + AluSq SINE Alu 1 294 -19 2013 144 79 53 chr10 79910857 79911096 -60405669 + MSTA LTR MaLR 172 428 0 234 290 11 0 chr10 79911121 79911214 -60405551 + L1MEc LINE L1 1601 1694 -4702 303 271 65 37 chr10 79911226 79911333 -60405432 - L1MC4 LINE L1 -1319 6723 6614 231 286 23 15 chr10 79911342 79911475 -60405290 + (CATA)n Simple_repeat Simple_repeat 3 136 0 * 289 219 42 0 chr10 79911380 79911476 -60405289 + (TA)n Simple_repeat Simple_repeat 2 101 0 631 250 95 46 chr10 79911559 79911611 -60405154 - L1ME LINE L1 -4594 2528 2480 2298 156 41 17 chr10 79911611 79912029 -60404736 - MSTA LTR MaLR 0 428 1 631 250 95 46 chr10 79912029 79912388 -60404377 - L1ME LINE L1 -4642 2480 2097 381 238 77 55 chr10 79912366 79912690 -60404075 - L1ME LINE L1 -5198 1733 1417 * 234 0 0 0 chr10 79912690 79912716 -60404049 + (TTG)n Simple_repeat Simple_repeat 2 27 0 381 238 77 55 chr10 79912716 79912751 -60404014 - L1ME LINE L1 -5514 1417 1398 2249 98 0 0 chr10 79912751 79913047 -60403718 - AluSx SINE Alu -16 296 1 361 289 83 83 chr10 79913217 79913650 -60403115 - L1ME LINE L1 -5970 453 21 1910 248 79 19 chr10 79914547 79915393 -60401372 + L1M4 LINE L1 3035 3931 -2215 1855 122 8 0 chr10 79915433 79915696 -60401069 + AluJb SINE Alu 4 268 -44 2347 94 0 0 chr10 79916388 79916697 -60400068 + AluSg SINE Alu 1 309 -1 1686 73 0 23 chr10 79920940 79921160 -60395605 - AluY SINE Alu 0 311 97 9237 32 5 3 chr10 79921160 79922229 -60394536 + MER11C LTR ERVK 1 1071 0 830 90 0 0 chr10 79922229 79922329 -60394436 - AluY SINE Alu -209 102 3 320 296 41 36 chr10 79922829 79923025 -60393740 - MIR SINE MIR -44 218 22 180 0 0 0 chr10 79923827 79923847 -60392918 + (A)n Simple_repeat Simple_repeat 1 20 0 2039 153 132 3 chr10 79924126 79924505 -60392260 + MSTA LTR MaLR 1 428 0 3427 178 2 2 chr10 79924505 79925094 -60391671 + MSTA-int LTR MaLR 1 589 -1062 629 205 0 16 chr10 79925115 79925237 -60391528 + MSTA-int LTR MaLR 554 673 -978 4210 109 5 7 chr10 79925237 79925853 -60390912 + L1PB1 LINE L1 5537 6151 0 358 81 48 0 chr10 79925859 79925921 -60390844 + GA-rich Low_complexity Low_complexity 3 67 0 681 236 46 61 chr10 79925923 79926249 -60390516 + L1M4 LINE L1 4146 4466 -1680 627 184 20 54 chr10 79926249 79926396 -60390369 + FLAM_A SINE Alu 1 142 0 1475 166 28 58 chr10 79926399 79926724 -60390041 + L1M4 LINE L1 4461 4775 -1371 2167 227 78 4 chr10 79926724 79927417 -60389348 - ERVL LTR ERVL -1176 4588 3751 2263 88 3 0 chr10 79927471 79927755 -60389010 + AluY SINE Alu 1 285 -26 36 0 0 0 chr10 79927755 79927791 -60388974 + AT_rich Low_complexity Low_complexity 1 36 0 904 224 48 33 chr10 79928129 79928223 -60388542 + L1MC4 LINE L1 7578 7669 -373 1943 168 22 38 chr10 79928223 79928592 -60388173 + MLT1A1 LTR MaLR 3 365 0 904 224 48 33 chr10 79928592 79928769 -60387996 + L1MC4 LINE L1 7669 7853 -189 2125 90 0 84 chr10 79928970 79929303 -60387462 - AluSx SINE Alu -5 307 3 1615 147 62 37 chr10 79929323 79929697 -60387068 - Tigger3(Golem) DNA MER2_type 0 3029 1 551 225 42 7 chr10 79929699 79929841 -60386924 - L1MC4a LINE L1 -1945 5863 5717 2099 99 14 0 chr10 79930054 79930338 -60386427 + AluSc SINE Alu 21 308 -1 429 316 44 53 chr10 79931101 79931329 -60385436 + LTR67 LTR ERVL 225 450 -107 246 308 195 19 chr10 79931526 79931685 -60385080 - MLT1J1 LTR MaLR -248 198 12 459 266 0 0 chr10 79931742 79931851 -60384914 + LTR67 LTR ERVL 447 555 -2 539 266 111 15 chr10 79931893 79932092 -60384673 + MIR SINE MIR 45 262 0 997 153 0 0 chr10 79932249 79932393 -60384372 - FRAM SINE Alu -17 159 16 2281 114 3 0 chr10 79933138 79933437 -60383328 + AluSq SINE Alu 1 300 -13 236 306 35 56 chr10 79933754 79933898 -60382867 + MIR SINE MIR 48 188 -74 372 59 0 0 chr10 79933898 79933949 -60382816 + (CA)n Simple_repeat Simple_repeat 2 52 0 231 36 0 0 chr10 79934283 79934311 -60382454 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 244 23 12 chr10 79934423 79934509 -60382256 + MER58C DNA MER1_type 39 125 -90 342 220 77 0 chr10 79934550 79934641 -60382124 + MER58C DNA MER1_type 99 196 -19 5217 229 61 79 chr10 79934662 79934836 -60381929 + L1M4 LINE L1 2938 3114 -3032 1498 142 146 62 chr10 79934836 79935124 -60381641 + AluSx SINE Alu 1 312 0 5217 229 61 79 chr10 79935124 79935259 -60381506 + L1M4 LINE L1 3114 3250 -2896 1706 138 16 0 chr10 79935259 79935513 -60381252 + AluSx SINE Alu 49 306 -6 5217 229 61 79 chr10 79935513 79936420 -60380345 + L1M4 LINE L1 3250 4172 -1974 2232 107 3 0 chr10 79936420 79936711 -60380054 + AluSg SINE Alu 11 302 -8 5217 229 61 79 chr10 79936711 79936782 -60379983 + L1M4 LINE L1 4172 4243 -1903 2475 74 0 13 chr10 79936782 79937093 -60379672 + AluY SINE Alu 1 307 -4 5217 229 61 79 chr10 79937093 79938072 -60378693 + L1M4 LINE L1 4243 5165 -981 8999 174 25 31 chr10 79938073 79939674 -60377091 + L1M2 LINE L1 3259 4869 -1428 3163 77 59 5 chr10 79939674 79940117 -60376648 - L1PA10 LINE L1 0 6168 5702 8999 174 25 31 chr10 79940117 79940246 -60376519 + L1M2 LINE L1 4869 4997 -1300 2269 98 11 0 chr10 79940246 79940533 -60376232 - AluSg SINE Alu -20 290 1 8999 174 25 31 chr10 79940533 79941138 -60375627 + L1M2 LINE L1 4997 5491 -806 225 0 0 0 chr10 79941138 79941163 -60375602 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 8999 174 25 31 chr10 79941163 79941314 -60375451 + L1M2 LINE L1 5491 5642 -655 1603 127 45 52 chr10 79941311 79941602 -60375163 + L1M3f LINE L1 1648 1936 -4629 * 773 163 27 0 chr10 79941606 79941753 -60375012 + L1M3f LINE L1 1973 2123 -4442 341 200 80 0 chr10 79941761 79941836 -60374929 + L1M3f LINE L1 3531 3611 -3954 2374 175 20 5 chr10 79941836 79942230 -60374535 + MSTB LTR MaLR 1 400 -26 1078 143 99 0 chr10 79942235 79942417 -60374348 + MER30 DNA MER1_type 1 200 -30 5352 180 26 34 chr10 79942424 79942871 -60373894 + L1M3f LINE L1 3590 4039 -3526 2334 102 3 10 chr10 79942871 79943184 -60373581 + AluSx SINE Alu 1 311 -1 5352 180 26 34 chr10 79943184 79943222 -60373543 + L1M3f LINE L1 4039 4076 -3489 1581 105 0 0 chr10 79943222 79943459 -60373306 + AluSq SINE Alu 86 322 0 5352 180 26 34 chr10 79943459 79944204 -60372561 + L1M3f LINE L1 4076 4810 -2755 1627 246 85 8 chr10 79944193 79944700 -60372065 - L1MC4a LINE L1 -122 7686 7141 * 273 0 51 0 chr10 79944880 79944919 -60371846 - AluY SINE Alu -224 76 36 467 215 44 37 chr10 79944955 79945090 -60371675 - L1M4 LINE L1 -855 5291 5156 2080 116 10 10 chr10 79945090 79945383 -60371382 - AluSx SINE Alu -19 293 1 1126 139 6 0 chr10 79945491 79945656 -60371109 + AluSq SINE Alu 128 293 -20 1265 108 42 9 chr10 79945783 79945995 -60370770 - L1MA5A LINE L1 -15 6282 6064 408 111 42 0 chr10 79946022 79946094 -60370671 - L1MB3 LINE L1 -2 6181 6107 264 120 36 2 chr10 79946111 79946170 -60370595 - L1MA6 LINE L1 -284 6016 5958 1401 164 0 48 chr10 79946194 79946308 -60370457 - L1 LINE L1 -908 5238 5120 2284 115 0 0 chr10 79946308 79946612 -60370153 + AluSx SINE Alu 1 304 -8 2267 100 3 0 chr10 79946614 79946903 -60369862 + AluSq SINE Alu 3 292 -21 1401 164 0 48 chr10 79946903 79947095 -60369670 - L1 LINE L1 -1027 5119 4944 311 257 95 9 chr10 79947101 79947206 -60369559 - MER5A DNA MER1_type -69 120 7 1090 183 70 39 chr10 79948633 79948757 -60368008 + AluJb SINE Alu 1 120 -192 180 0 0 0 chr10 79948757 79948777 -60367988 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1090 183 70 39 chr10 79948777 79948909 -60367856 + AluJb SINE Alu 120 265 -47 352 217 108 64 chr10 79949575 79949732 -60367033 - MER69A DNA AcHobo -4 173 10 215 303 76 21 chr10 79950274 79950419 -60366346 - L2 LINE L2 -834 2480 2328 615 266 77 34 chr10 79952322 79952619 -60364146 + L1MEd LINE L1 12 321 -5798 760 161 17 100 chr10 79952665 79952845 -60363920 + AluJo SINE Alu 32 196 -116 478 269 117 15 chr10 79952863 79953060 -60363705 + L1MEd LINE L1 490 706 -5413 189 425 0 0 chr10 79953356 79953436 -60363329 - MIR3 SINE MIR -125 83 4 262 306 41 0 chr10 79953960 79954058 -60362707 + L2 LINE L2 3209 3310 -3 198 0 0 0 chr10 79955053 79955075 -60361690 + (A)n Simple_repeat Simple_repeat 1 22 0 3959 178 48 53 chr10 79956486 79957445 -60359320 - LTR13 LTR ERVK 0 954 1 1881 149 142 39 chr10 79958849 79959264 -60357501 + LTR46 LTR ERV1 1 458 -2 1354 225 86 68 chr10 79960171 79960620 -60356145 - LOR1a LTR ERV1 0 497 58 778 77 19 0 chr10 79960620 79960724 -60356041 - U6 snRNA snRNA -1 106 1 2158 126 0 3 chr10 79960724 79961018 -60355747 - AluSx SINE Alu -19 293 1 1354 225 86 68 chr10 79961018 79961055 -60355710 - LOR1a LTR ERV1 -438 59 1 293 249 102 58 chr10 79961066 79961295 -60355470 - L1MC4 LINE L1 -399 7643 7292 2008 172 23 23 chr10 79961374 79961819 -60354946 + MER89 LTR ERV1 10 553 -6 182 300 0 0 chr10 79962249 79962289 -60354476 + L2 LINE L2 3212 3251 -21 210 105 0 0 chr10 79963224 79963262 -60353503 + (TA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr10 79968143 79968168 -60348597 + (TG)n Simple_repeat Simple_repeat 2 26 0 487 250 117 96 chr10 79968171 79968264 -60348501 + MLT2C2 LTR ERVL 20 110 -354 2285 76 24 3 chr10 79968264 79968553 -60348212 + AluY SINE Alu 1 295 -16 487 250 117 96 chr10 79968553 79968895 -60347870 + MLT2C2 LTR ERVL 110 464 0 602 264 24 61 chr10 79969008 79969254 -60347511 + HAL1 LINE L1 8 244 -2263 1443 235 136 65 chr10 79969372 79969844 -60346921 + HAL1 LINE L1 411 848 -1659 390 21 0 0 chr10 79969844 79969891 -60346874 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1443 235 136 65 chr10 79969891 79970131 -60346634 + HAL1 LINE L1 848 1187 -1320 2082 149 10 0 chr10 79970131 79970440 -60346325 + AluJo SINE Alu 1 312 0 1443 235 136 65 chr10 79970440 79970521 -60346244 + HAL1 LINE L1 1187 1261 -1246 2435 82 3 0 chr10 79970649 79970955 -60345810 - AluY SINE Alu -4 307 1 236 283 30 50 chr10 79971148 79971247 -60345518 + HAL1 LINE L1 1792 1888 -619 827 143 0 0 chr10 79971950 79972069 -60344696 + FLAM_C SINE Alu 1 119 -24 213 294 11 87 chr10 79972716 79972808 -60343957 - MIR3 SINE MIR -2 206 122 346 175 62 12 chr10 79973072 79973152 -60343613 - L1ME4a LINE L1 -6 6115 6032 2213 89 3 0 chr10 79973289 79973581 -60343184 + AluSp SINE Alu 1 293 -20 696 289 69 4 chr10 79976679 79976939 -60339826 + MER5C DNA MER1_type 1 277 -47 264 188 0 0 chr10 79976942 79977006 -60339759 + (CA)n Simple_repeat Simple_repeat 1 64 0 207 88 0 0 chr10 79977215 79977249 -60339516 + (T)n Simple_repeat Simple_repeat 1 34 0 304 226 0 0 chr10 79980367 79980420 -60336345 - MER81 DNA DNA -18 96 44 577 268 36 27 chr10 79980725 79980945 -60335820 + MLT1J LTR MaLR 290 511 0 2014 144 0 0 chr10 79981586 79981892 -60334873 + AluSx SINE Alu 2 307 -5 380 252 45 26 chr10 79982478 79982633 -60334132 + L1ME3A LINE L1 5773 5930 -191 1397 214 48 61 chr10 79982946 79983285 -60333480 + MLT1A2 LTR MaLR 1 336 -38 1795 163 3 7 chr10 79983285 79983591 -60333174 - AluJo SINE Alu -7 305 1 1397 214 48 61 chr10 79983591 79983630 -60333135 + MLT1A2 LTR MaLR 336 374 0 182 235 39 20 chr10 79983823 79983874 -60332891 + MER5B DNA MER1_type 1 52 -126 263 314 25 16 chr10 79983924 79984045 -60332720 + L1ME LINE L1 51 172 -5898 324 290 73 67 chr10 79984908 79985457 -60331308 + L1ME LINE L1 800 1362 -4718 1361 258 62 21 chr10 79985457 79985942 -60330823 + MLT1D LTR MaLR 1 505 0 324 290 73 67 chr10 79985942 79986217 -60330548 + L1ME LINE L1 1362 1634 -4446 2032 118 0 43 chr10 79986283 79986606 -60330159 + AluSx SINE Alu 1 309 -3 455 331 46 79 chr10 79986610 79986915 -60329850 + L1ME LINE L1 1798 2092 -4169 329 211 10 77 chr10 79986966 79987070 -60329695 + L1ME3A LINE L1 6074 6170 0 * 917 236 60 12 chr10 79987066 79987397 -60329368 + L1ME LINE L1 2111 2457 -3623 2005 126 0 7 chr10 79987566 79987868 -60328897 - AluJb SINE Alu -12 300 1 601 224 55 91 chr10 79987868 79988078 -60328687 - MER58C DNA MER1_type -2216 204 1 410 287 79 82 chr10 79988544 79988644 -60328121 + MLT1J LTR MaLR 5 104 -407 2222 106 3 0 chr10 79988644 79988946 -60327819 - AluSx SINE Alu -9 303 1 410 287 79 82 chr10 79988946 79989162 -60327603 + MLT1J LTR MaLR 104 320 -191 948 251 96 37 chr10 79989850 79990204 -60326561 + L1MB7 LINE L1 5809 6183 -1 1572 178 27 17 chr10 79991943 79992241 -60324524 - AluJb SINE Alu -11 301 1 2253 90 0 13 chr10 79992489 79992790 -60323975 + AluSq SINE Alu 1 297 -16 2005 135 3 0 chr10 79992800 79993097 -60323668 + AluSx SINE Alu 1 298 -14 211 358 23 23 chr10 79993501 79993677 -60323088 - MIR3 SINE MIR -11 197 22 277 252 29 19 chr10 79994515 79994618 -60322147 + GA-rich Low_complexity Low_complexity 4 107 0 235 327 9 9 chr10 79997599 79997647 -60319118 + HAL1b LINE L1 1226 1273 -75 2100 134 3 0 chr10 79997647 79997953 -60318812 - AluSx SINE Alu -5 307 1 235 327 9 9 chr10 79997953 79998011 -60318754 + HAL1b LINE L1 1272 1332 -16 405 0 0 0 chr10 79998137 79998182 -60318583 + (TA)n Simple_repeat Simple_repeat 1 45 0 2085 107 43 0 chr10 79998238 79998537 -60318228 - AluSx SINE Alu 0 312 1 2180 102 0 3 chr10 79999053 79999346 -60317419 + AluSq SINE Alu 1 292 -21 437 302 38 13 chr10 79999779 79999938 -60316827 + MIR SINE MIR 56 218 -44 317 301 48 14 chr10 80002045 80002191 -60314574 + L2 LINE L2 2694 2844 -470 762 302 57 19 chr10 80002240 80002608 -60314157 + L2 LINE L2 2932 3313 0 419 286 42 0 chr10 80002647 80002766 -60313999 + MIR SINE MIR 121 244 -18 2232 115 0 0 chr10 80003738 80004042 -60312723 + AluSx SINE Alu 1 304 -8 1969 134 3 0 chr10 80006039 80006331 -60310434 + AluSg SINE Alu 1 293 -17 27 73 0 0 chr10 80006350 80006405 -60310360 + AT_rich Low_complexity Low_complexity 1 55 0 1929 187 102 43 chr10 80006409 80006938 -60309827 + L1MC2 LINE L1 5777 6336 -8 2192 84 24 3 chr10 80007202 80007498 -60309267 - AluSp SINE Alu -11 302 1 641 167 0 0 chr10 80007498 80007594 -60309171 - AluJ SINE Alu -14 298 203 638 152 179 0 chr10 80007593 80007705 -60309060 - AluJ SINE Alu -179 133 2 * 253 324 6 35 chr10 80007706 80007879 -60308886 - L1MC4 LINE L1 -180 7862 7695 1366 248 48 80 chr10 80008689 80009038 -60307727 + L1MD1 LINE L1 5753 6112 -130 564 29 0 0 chr10 80009038 80009108 -60307657 + (CA)n Simple_repeat Simple_repeat 1 70 0 1366 248 48 80 chr10 80009108 80009248 -60307517 + L1MD1 LINE L1 6112 6228 -14 2078 117 3 7 chr10 80009248 80009548 -60307217 - AluSx SINE Alu -13 299 1 382 349 52 6 chr10 80009686 80009858 -60306907 + L1MC/D LINE L1 5474 5653 -2155 1921 139 17 7 chr10 80010038 80010340 -60306425 + AluSx SINE Alu 1 305 -7 2048 142 3 0 chr10 80010356 80010667 -60306098 + AluSx SINE Alu 1 312 0 2100 103 3 3 chr10 80010912 80011214 -60305551 - AluSx SINE Alu -10 302 1 416 270 48 41 chr10 80011214 80011449 -60305316 + L1MC/D LINE L1 5579 5803 -365 22 70 0 0 chr10 80011741 80011784 -60304981 + AT_rich Low_complexity Low_complexity 1 43 0 2108 117 3 3 chr10 80011893 80012200 -60304565 + AluSx SINE Alu 1 307 -5 410 119 0 0 chr10 80012264 80012323 -60304442 + AluSg/x SINE Alu 215 273 -39 843 266 100 4 chr10 80013352 80013581 -60303184 + MIR SINE MIR 9 259 -3 991 265 94 30 chr10 80014752 80014803 -60301962 + L1M4 LINE L1 4557 4603 -1543 1943 123 23 19 chr10 80014803 80015112 -60301653 + AluSx SINE Alu 1 310 -2 991 265 94 30 chr10 80015112 80015494 -60301271 + L1M4 LINE L1 4603 5018 -1128 1778 141 61 0 chr10 80015606 80015883 -60300882 + AluSq SINE Alu 1 294 -19 361 291 30 30 chr10 80017104 80017238 -60299527 + L2 LINE L2 3180 3313 0 242 326 51 7 chr10 80018802 80018940 -60297825 + L2 LINE L2 2919 3062 -210 187 189 27 0 chr10 80019050 80019087 -60297678 + L2 LINE L2 3267 3304 -9 2101 128 0 0 chr10 80020605 80020911 -60295854 + AluSx SINE Alu 1 306 -6 2256 123 3 0 chr10 80022887 80023196 -60293569 + AluSq SINE Alu 1 310 -3 1974 150 13 3 chr10 80023764 80024071 -60292694 + AluJo SINE Alu 1 310 -2 2101 122 10 3 chr10 80024112 80024407 -60292358 + AluSx SINE Alu 9 305 -7 181 324 19 28 chr10 80025298 80025406 -60291359 + L2 LINE L2 3156 3262 -10 245 253 0 71 chr10 80026157 80026256 -60290509 - MIR3 SINE MIR -1 207 116 466 229 53 23 chr10 80026447 80026578 -60290187 - MER103 DNA DNA -19 147 13 366 250 21 21 chr10 80026822 80026918 -60289847 + MER68 LTR ERV1 1 96 -466 2182 210 30 49 chr10 80027599 80028128 -60288637 + MER68 LTR ERV1 1 519 -43 345 291 114 46 chr10 80028231 80028848 -60287917 - L2 LINE L2 -27 3286 2622 311 325 0 0 chr10 80028868 80028995 -60287770 + MIR3 SINE MIR 62 189 -19 418 200 0 18 chr10 80029248 80029358 -60287407 + GA-rich Low_complexity Low_complexity 3 110 0 207 0 0 0 chr10 80029603 80029626 -60287139 + (A)n Simple_repeat Simple_repeat 1 23 0 2339 107 0 0 chr10 80029631 80029931 -60286834 + AluSq SINE Alu 1 300 -13 2241 113 0 0 chr10 80030085 80030376 -60286389 + AluSg SINE Alu 1 291 -19 304 267 105 0 chr10 80031004 80031109 -60285656 - L3 LINE CR1 -213 1364 1249 224 233 0 0 chr10 80031309 80031352 -60285413 + (CA)n Simple_repeat Simple_repeat 1 43 0 1636 139 8 4 chr10 80031436 80031674 -60285091 - AluJb SINE Alu -73 239 1 654 157 87 0 chr10 80033552 80033667 -60283098 - FLAM_C SINE Alu -17 126 2 2670 166 92 32 chr10 80033721 80034343 -60282422 - L1MB7 LINE L1 -21 6163 5505 1103 214 33 95 chr10 80035721 80035759 -60281006 + L1MC4 LINE L1 6459 6498 -1544 2243 116 3 3 chr10 80035759 80036062 -60280703 + AluSc SINE Alu 1 303 -6 1103 214 33 95 chr10 80036062 80036081 -60280684 + L1MC4 LINE L1 6498 6517 -1525 2287 72 14 0 chr10 80036081 80036379 -60280386 - AluY SINE Alu 0 302 1 1103 214 33 95 chr10 80036379 80036657 -60280108 + L1MC4 LINE L1 6517 6768 -1274 1627 173 61 4 chr10 80036657 80036935 -60279830 - AluJo SINE Alu -18 294 1 1103 214 33 95 chr10 80036935 80037016 -60279749 + L1MC4 LINE L1 6768 6852 -1190 267 333 17 16 chr10 80037689 80037828 -60278937 - MIR SINE MIR -62 146 28 262 234 117 27 chr10 80038124 80038235 -60278530 + MER5A DNA MER1_type 1 121 -68 2026 130 3 10 chr10 80038373 80038665 -60278100 + AluJb SINE Alu 1 290 -22 216 0 0 0 chr10 80038669 80038693 -60278072 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 528 194 243 7 chr10 80038734 80038878 -60277887 + MER5B DNA MER1_type 1 178 0 732 204 10 66 chr10 80038886 80039082 -60277683 + MER5A DNA MER1_type 1 185 -4 1093 191 57 0 chr10 80039094 80039303 -60277462 - MER58A DNA MER1_type 0 224 4 1738 184 0 23 chr10 80039732 80040036 -60276729 + AluJb SINE Alu 1 297 -15 234 0 0 0 chr10 80040123 80040149 -60276616 + (CA)n Simple_repeat Simple_repeat 2 27 0 317 280 112 16 chr10 80040594 80040719 -60276046 - MIR SINE MIR -14 248 112 497 148 11 34 chr10 80041872 80041960 -60274805 + Tigger3(Golem) DNA MER2_type 1 86 -2943 2002 145 0 10 chr10 80042022 80042326 -60274439 + AluJb SINE Alu 1 301 -11 271 143 0 0 chr10 80042326 80042368 -60274397 + Tigger3(Golem) DNA MER2_type 67 108 -2921 4005 127 38 30 chr10 80042368 80042536 -60274229 + Tigger3(Golem) DNA MER2_type 2285 2450 -579 2005 146 7 10 chr10 80042536 80042845 -60273920 - AluJo SINE Alu -4 308 1 4005 127 38 30 chr10 80042845 80043415 -60273350 + Tigger3(Golem) DNA MER2_type 2450 3029 0 387 238 19 29 chr10 80043747 80043852 -60272913 - MIR SINE MIR -69 193 90 2394 90 3 13 chr10 80043959 80044270 -60272495 - AluSq SINE Alu -5 308 1 425 279 86 7 chr10 80044271 80044411 -60272354 - MIR SINE MIR -34 228 78 1304 249 103 23 chr10 80044473 80044947 -60271818 - Charlie1b DNA MER1_type -10 513 2 186 328 60 26 chr10 80045253 80045369 -60271396 - MIR SINE MIR 0 262 143 333 307 178 4 chr10 80045780 80046011 -60270754 - L3 LINE CR1 -14 1563 1293 2380 218 100 42 chr10 80046031 80046748 -60270017 + L1ME1 LINE L1 5412 6161 -5 1985 147 0 23 chr10 80046769 80047068 -60269697 - AluJo SINE Alu -20 292 1 180 308 188 33 chr10 80047086 80047326 -60269439 - L3 LINE CR1 -477 1100 824 661 187 39 32 chr10 80048198 80048353 -60268412 + MER5A DNA MER1_type 34 189 0 269 229 29 0 chr10 80048565 80048635 -60268130 + LTR16C LTR ERVL 415 486 -5 237 330 0 33 chr10 80048684 80048775 -60267990 + L2 LINE L2 2999 3086 -186 345 242 234 0 chr10 80049960 80050084 -60266681 - MER5A DNA MER1_type -36 153 1 631 210 36 7 chr10 80050188 80050326 -60266439 + MER3 DNA MER1_type 68 209 0 344 154 77 13 chr10 80051328 80051406 -60265359 + MLT1C LTR MaLR 3 85 -382 1863 202 21 5 chr10 80051500 80051876 -60264889 + MLT1C LTR MaLR 82 463 -4 196 323 79 31 chr10 80051949 80052076 -60264689 + L2 LINE L2 3138 3270 -2 284 318 8 79 chr10 80052077 80052203 -60264562 + MIR3 SINE MIR 68 184 -24 406 322 7 35 chr10 80053532 80053675 -60263090 + MIR3 SINE MIR 41 179 -29 189 379 123 28 chr10 80053694 80053905 -60262860 + L3 LINE CR1 629 859 -718 2146 139 0 7 chr10 80054070 80054373 -60262392 + AluJb SINE Alu 1 301 -11 286 277 177 38 chr10 80054747 80055086 -60261679 + L3 LINE CR1 1189 1574 -3 2348 101 0 7 chr10 80055206 80055514 -60261251 - AluSg SINE Alu -4 306 1 240 214 54 0 chr10 80056890 80056946 -60259819 - MER5A DNA MER1_type -84 105 47 805 286 41 12 chr10 80057854 80058036 -60258729 + MIR SINE MIR 11 203 -59 1630 143 84 32 chr10 80058036 80058379 -60258386 + MER46B DNA MER2_type 1 236 0 805 286 41 12 chr10 80058379 80058441 -60258324 + MIR SINE MIR 203 262 0 798 269 51 20 chr10 80058587 80058840 -60257925 - MIR SINE MIR 0 262 2 721 155 9 0 chr10 80059892 80060008 -60256757 + AluJo/FLAM SINE Alu 1 117 -185 2066 116 49 3 chr10 80060009 80060294 -60256471 - AluSx SINE Alu -14 298 1 560 110 0 11 chr10 80060315 80060406 -60256359 + (GGGA)n Simple_repeat Simple_repeat 3 92 0 905 110 0 77 chr10 80060529 80060684 -60256081 - FLAM_C SINE Alu 0 143 1 581 267 162 0 chr10 80061881 80062072 -60254693 + MIR SINE MIR 27 248 -14 1988 260 112 53 chr10 80062648 80063813 -60252952 - L2 LINE L2 -56 3257 2048 2323 108 0 0 chr10 80063844 80064159 -60252606 + AluSx SINE Alu 1 315 0 719 243 106 0 chr10 80064421 80064610 -60252155 - MIR SINE MIR -10 252 44 1837 113 0 0 chr10 80064635 80064873 -60251892 - AluSg/x SINE Alu -6 306 69 297 292 68 62 chr10 80065876 80066068 -60250697 + MIR SINE MIR 20 212 -50 1887 112 33 49 chr10 80066298 80066603 -60250162 + AluSx SINE Alu 1 300 -12 2242 121 0 6 chr10 80067355 80067669 -60249096 - AluSx SINE Alu 0 312 1 202 266 160 21 chr10 80069454 80069548 -60247217 - MIR3 SINE MIR -49 159 53 220 254 17 17 chr10 80069729 80069788 -60246977 + MER5B DNA MER1_type 1 59 -119 1936 100 100 4 chr10 80070055 80070326 -60246439 - AluSx SINE Alu -15 297 1 2206 153 10 18 chr10 80070339 80070730 -60246035 + MLT1B LTR MaLR 3 390 0 321 326 23 0 chr10 80070784 80070913 -60245852 - MIR SINE MIR -59 203 72 246 264 109 18 chr10 80073504 80073614 -60243151 + MER20B DNA MER1_type 31 150 -633 251 216 102 57 chr10 80074079 80074167 -60242598 + MIR SINE MIR 47 138 -124 1322 86 6 0 chr10 80074204 80074366 -60242399 + AluSp SINE Alu 1 163 -150 197 291 81 0 chr10 80074732 80074818 -60241947 + L2 LINE L2 3006 3098 -215 550 191 136 27 chr10 80074881 80075028 -60241737 + MER45A DNA AcHobo 1 163 -15 309 26 0 0 chr10 80075239 80075277 -60241488 + (CA)n Simple_repeat Simple_repeat 2 39 0 219 275 261 0 chr10 80075483 80075552 -60241213 + MIR SINE MIR 22 108 -154 361 226 12 0 chr10 80076141 80076225 -60240540 - MIR3 SINE MIR -7 201 117 257 372 62 0 chr10 80076276 80076421 -60240344 + L2 LINE L2 3111 3264 -8 196 236 45 67 chr10 80077033 80077122 -60239643 - MIR SINE MIR -68 194 108 717 224 0 57 chr10 80077842 80078052 -60238713 + MIR SINE MIR 2 199 -63 198 0 0 0 chr10 80078205 80078227 -60238538 + (T)n Simple_repeat Simple_repeat 1 22 0 193 139 0 0 chr10 80078422 80078458 -60238307 + L2 LINE L2 3017 3052 -220 1066 50 0 0 chr10 80079391 80079510 -60237255 + AluSq/x SINE Alu 1 119 -193 1034 123 91 0 chr10 80079667 80079821 -60236944 + AluSc SINE Alu 125 292 -17 711 265 65 65 chr10 80079919 80080225 -60236540 + L1MC4 LINE L1 7630 7938 -104 1862 106 91 11 chr10 80080225 80080499 -60236266 + AluSq SINE Alu 3 298 -15 711 265 65 65 chr10 80080499 80080604 -60236161 + L1MC4 LINE L1 7937 8041 -1 2227 112 0 0 chr10 80080738 80081053 -60235712 + AluSx SINE Alu 1 315 0 817 178 0 0 chr10 80081218 80081347 -60235418 + FLAM_C SINE Alu 13 141 -2 264 289 36 0 chr10 80081348 80081431 -60235334 + GA-rich Low_complexity Low_complexity 1 86 0 552 231 95 0 chr10 80083045 80083192 -60233573 + MIR SINE MIR 31 191 -71 466 253 111 30 chr10 80083685 80083883 -60232882 - MIR SINE MIR -10 252 39 269 340 52 24 chr10 80083921 80084133 -60232632 + L2 LINE L2 2827 3044 -228 2430 85 0 49 chr10 80084182 80084321 -60232444 + AluSx SINE Alu 1 145 -167 2301 117 0 0 chr10 80084321 80084621 -60232144 + AluSg SINE Alu 3 302 -8 2430 85 0 49 chr10 80084621 80084809 -60231956 + AluSx SINE Alu 145 312 0 289 307 35 18 chr10 80085862 80085976 -60230789 - MER5A DNA MER1_type -69 120 5 471 254 47 26 chr10 80086010 80086203 -60230562 + L1ME LINE L1 5580 5776 -345 2509 56 0 0 chr10 80086248 80086575 -60230190 + AluY SINE Alu 1 327 0 307 115 4 16 chr10 80086575 80086643 -60230122 + Alu SINE Alu 251 299 -2 629 146 75 2 chr10 80086654 80086815 -60229950 + Tigger4(Zombi) DNA MER2_type 5 2565 -166 2522 90 0 0 chr10 80086815 80087126 -60229639 + AluSx SINE Alu 1 311 -1 1322 93 16 47 chr10 80087127 80087320 -60229445 + AluSg/x SINE Alu 118 304 -6 1145 123 0 6 chr10 80087320 80087499 -60229266 + Tigger4(Zombi) DNA MER2_type 2554 2731 0 871 173 16 70 chr10 80087693 80087878 -60228887 + FAM SINE Alu 1 175 0 550 129 32 0 chr10 80087883 80087976 -60228789 + THE1A LTR MaLR 186 281 -74 1193 38 6 0 chr10 80087976 80088133 -60228632 + THE1A-int LTR MaLR 1423 1580 0 1984 114 23 3 chr10 80088133 80088439 -60228326 + THE1A LTR MaLR 1 312 -43 2540 77 0 0 chr10 80088516 80088816 -60227949 + AluSq SINE Alu 1 300 -13 777 153 0 0 chr10 80088846 80088970 -60227795 - FLAM_C SINE Alu -9 124 1 2198 136 0 3 chr10 80090287 80090595 -60226170 - AluSx SINE Alu -5 307 1 464 281 18 0 chr10 80090730 80090844 -60225921 - MER5C DNA MER1_type -201 123 8 1869 166 3 0 chr10 80090967 80091251 -60225514 + AluJb SINE Alu 1 285 -27 870 235 111 0 chr10 80091264 80091498 -60225267 - MIR SINE MIR -1 261 2 208 284 112 47 chr10 80091498 80091602 -60225163 + MIR SINE MIR 92 206 -56 1884 70 19 0 chr10 80092926 80093184 -60223581 + L1PA7 LINE L1 5892 6154 0 194 329 37 0 chr10 80093959 80094041 -60222724 + MIR SINE MIR 69 153 -109 362 260 0 0 chr10 80094265 80094342 -60222423 + MIR3 SINE MIR 126 202 -6 2075 128 3 41 chr10 80094360 80094680 -60222085 + AluSx SINE Alu 1 308 -4 189 0 0 0 chr10 80094799 80094820 -60221945 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1521 174 57 0 chr10 80094820 80095085 -60221680 - AluJo SINE Alu -32 280 1 1614 151 36 62 chr10 80095587 80095892 -60220873 + AluJo SINE Alu 1 297 -15 1837 122 84 21 chr10 80095924 80096210 -60220555 - 7SLRNA srpRNA srpRNA -13 307 4 22 0 0 0 chr10 80096744 80096766 -60219999 + AT_rich Low_complexity Low_complexity 1 22 0 290 288 33 26 chr10 80096971 80097124 -60219641 + L1MC5 LINE L1 7506 7659 -302 322 224 0 0 chr10 80097127 80097194 -60219571 + L1MC5 LINE L1 7704 7770 -191 1806 181 3 3 chr10 80097251 80097555 -60219210 - AluJo SINE Alu -8 304 1 307 290 70 56 chr10 80097602 80097816 -60218949 - L3 LINE CR1 -193 1384 1168 402 252 95 34 chr10 80098072 80098219 -60218546 - MIR SINE MIR -67 195 40 2257 122 0 0 chr10 80098716 80099011 -60217754 + AluSg SINE Alu 1 295 -15 246 301 191 0 chr10 80099173 80099309 -60217456 - MER103 DNA DNA -3 163 2 1646 134 4 13 chr10 80099661 80099899 -60216866 + AluJo SINE Alu 58 293 -19 1296 123 5 5 chr10 80099963 80100150 -60216615 - AluSp SINE Alu -16 297 111 2288 98 3 7 chr10 80100397 80100694 -60216071 - AluSq SINE Alu -17 296 1 1940 144 53 16 chr10 80100793 80101007 -60215758 + L1MB3 LINE L1 5573 5808 -375 198 0 0 0 chr10 80101007 80101029 -60215736 + (TA)n Simple_repeat Simple_repeat 2 23 0 1940 144 53 16 chr10 80101029 80101189 -60215576 + L1MB3 LINE L1 5808 5961 -222 1733 134 0 25 chr10 80101193 80101469 -60215296 + AluSx SINE Alu 39 307 -5 994 160 11 51 chr10 80101471 80101690 -60215075 + AluJb SINE Alu 136 347 0 809 159 56 78 chr10 80101693 80101847 -60214918 + L1MB3 LINE L1 5955 6104 -79 2444 74 30 0 chr10 80101847 80102146 -60214619 + AluSq SINE Alu 1 308 -5 809 159 56 78 chr10 80102146 80102223 -60214542 + L1MB3 LINE L1 6104 6181 -2 2224 108 3 7 chr10 80102231 80102526 -60214239 + AluSx SINE Alu 1 294 -18 238 89 0 22 chr10 80102526 80102571 -60214194 + L1MB3 LINE L1 6133 6176 -7 2245 128 0 0 chr10 80103036 80103341 -60213424 + AluSx SINE Alu 1 305 -7 261 0 0 0 chr10 80103687 80103716 -60213049 + (T)n Simple_repeat Simple_repeat 1 29 0 319 313 0 0 chr10 80104078 80104158 -60212607 - L2 LINE L2 0 3313 3234 195 311 87 0 chr10 80104343 80104446 -60212319 - MIR SINE MIR -78 184 73 233 288 45 27 chr10 80104677 80104788 -60211977 + MLT1K LTR MaLR 137 249 -339 930 122 0 0 chr10 80105162 80105285 -60211480 + FRAM SINE Alu 1 117 -59 200 258 65 11 chr10 80106019 80106112 -60210653 - L2 LINE L2 -1052 2262 2165 224 211 0 19 chr10 80106315 80106367 -60210398 - MIR SINE MIR -98 164 114 892 228 55 50 chr10 80107713 80107807 -60208958 - HAL1 LINE L1 -1105 1402 1310 2239 99 0 17 chr10 80107807 80108123 -60208642 - AluSg SINE Alu 0 310 1 892 228 55 50 chr10 80108123 80108392 -60208373 - HAL1 LINE L1 -1197 1310 1037 1885 166 17 3 chr10 80108415 80108717 -60208048 + AluJo SINE Alu 1 306 -6 1316 166 29 0 chr10 80108789 80108994 -60207771 + 7SLRNA srpRNA srpRNA 1 211 -109 2249 109 13 0 chr10 80109585 80109889 -60206876 - AluSq SINE Alu -5 308 1 661 153 0 65 chr10 80110165 80110289 -60206476 + 7SLRNA srpRNA srpRNA 198 313 -7 417 162 0 0 chr10 80110557 80110631 -60206134 - AluS SINE Alu -238 74 1 904 150 0 0 chr10 80110639 80110772 -60205993 + AluSg/x SINE Alu 159 291 -19 504 209 0 101 chr10 80110794 80110923 -60205842 + MLT1E2 LTR MaLR 1 116 -510 1358 120 0 5 chr10 80110923 80111115 -60205650 + AluSg/x SINE Alu 120 310 0 2354 115 3 3 chr10 80111126 80111439 -60205326 + AluSp SINE Alu 1 313 0 2054 186 79 25 chr10 80111453 80111884 -60204881 + MLT1E2 LTR MaLR 116 562 -62 2428 93 3 0 chr10 80111884 80112194 -60204571 - AluY SINE Alu 0 311 1 2054 186 79 25 chr10 80112194 80112259 -60204506 + MLT1E2 LTR MaLR 562 622 -2 273 293 9 86 chr10 80112261 80112377 -60204388 + L2 LINE L2 3145 3251 -21 2389 107 0 0 chr10 80113196 80113505 -60203260 + AluSc SINE Alu 1 309 0 230 283 0 0 chr10 80113661 80113714 -60203051 - L2 LINE L2 -18 3295 3243 238 310 172 0 chr10 80113718 80113805 -60202960 - MIR SINE MIR -62 146 45 214 293 38 47 chr10 80114477 80114583 -60202182 + L2 LINE L2 3208 3312 -1 423 262 128 23 chr10 80114719 80114746 -60202019 + L2 LINE L2 3114 3137 -176 2221 87 35 35 chr10 80114746 80115056 -60201709 - AluSq SINE Alu -3 310 1 423 262 128 23 chr10 80115056 80115200 -60201565 + L2 LINE L2 3137 3303 -10 1896 127 55 10 chr10 80115200 80115491 -60201274 + AluJo SINE Alu 1 304 -8 424 313 8 0 chr10 80115686 80115817 -60200948 - MIR SINE MIR -14 248 117 2307 89 30 0 chr10 80115945 80116249 -60200516 + AluSq SINE Alu 1 313 0 192 306 16 16 chr10 80116584 80116646 -60200119 - MIR SINE MIR -138 124 63 1971 173 20 50 chr10 80116933 80117436 -60199329 + MER89 LTR ERV1 4 559 0 195 241 25 89 chr10 80117637 80117716 -60199049 - MIR3 SINE MIR -47 161 88 608 252 44 53 chr10 80118159 80118385 -60198380 - MIR SINE MIR -32 230 7 1567 178 71 4 chr10 80118430 80118549 -60198216 + AluJo SINE Alu 1 111 -201 207 0 0 0 chr10 80118549 80118572 -60198193 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 1567 178 71 4 chr10 80118572 80118733 -60198032 + AluJo SINE Alu 111 300 -12 1705 171 0 26 chr10 80119111 80119421 -60197344 - AluJo SINE Alu -10 302 1 2242 91 0 57 chr10 80119429 80119610 -60197155 - AluSq SINE Alu -12 301 144 2241 118 3 13 chr10 80119610 80119923 -60196842 - AluSg SINE Alu 0 310 1 2242 91 0 57 chr10 80119923 80120059 -60196706 - AluSq SINE Alu -169 144 2 233 253 40 0 chr10 80120773 80120848 -60195917 - L1ME3A LINE L1 -87 6083 6006 2311 104 3 19 chr10 80120926 80121243 -60195522 - AluSx SINE Alu 0 312 1 2289 107 3 19 chr10 80121254 80121571 -60195194 - AluSx SINE Alu 0 312 1 804 290 96 6 chr10 80121654 80121968 -60194797 - L1ME3A LINE L1 -265 5905 5564 2363 100 0 3 chr10 80122114 80122414 -60194351 + AluY SINE Alu 1 299 -12 723 193 0 0 chr10 80122451 80122586 -60194179 + FRAM SINE Alu 40 174 -2 2156 140 7 0 chr10 80122664 80122972 -60193793 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 80122975 80122996 -60193769 + AT_rich Low_complexity Low_complexity 1 21 0 1579 243 96 13 chr10 80122996 80123444 -60193321 - MLT1J LTR MaLR -24 487 3 220 36 0 0 chr10 80123574 80123602 -60193163 + (TTTTA)n Simple_repeat Simple_repeat 2 175 0 1998 122 14 0 chr10 80123602 80123880 -60192885 - AluSq SINE Alu -28 285 4 1357 181 65 0 chr10 80124000 80124277 -60192488 - AluSx SINE Alu -17 295 1 757 226 0 7 chr10 80124314 80124460 -60192305 - FRAM SINE Alu -31 145 1 1080 135 43 34 chr10 80124487 80124695 -60192070 - AluJo SINE Alu -27 285 76 709 201 41 35 chr10 80124813 80124982 -60191783 + AluJb SINE Alu 134 303 -9 2029 142 3 3 chr10 80125032 80125342 -60191423 - AluSx SINE Alu 0 312 3 661 249 26 21 chr10 80125782 80125971 -60190794 - MIR SINE MIR 0 262 73 698 82 123 41 chr10 80125982 80126104 -60190661 + FLAM_C SINE Alu 2 133 0 190 310 69 0 chr10 80126122 80126180 -60190585 - MIR SINE MIR -184 78 17 242 217 83 17 chr10 80126225 80126285 -60190480 + L2 LINE L2 3205 3268 -4 2396 81 0 0 chr10 80126636 80126945 -60189820 - AluSx SINE Alu -3 309 1 412 239 45 0 chr10 80126963 80127051 -60189714 + L2 LINE L2 3221 3312 -1 1966 135 0 25 chr10 80128642 80128961 -60187804 - AluJb SINE Alu -1 311 1 182 376 43 11 chr10 80130216 80130309 -60186456 + MIR SINE MIR 19 114 -94 2297 76 0 10 chr10 80131192 80131493 -60185272 - AluSg SINE Alu -12 298 1 657 154 45 0 chr10 80131526 80131636 -60185129 - FLAM_A SINE Alu -16 117 3 364 309 103 6 chr10 80133111 80133286 -60183479 + L1ME4a LINE L1 5717 5908 -213 2473 46 0 46 chr10 80134275 80134599 -60182166 + AluY SINE Alu 1 309 -2 645 183 18 59 chr10 80135384 80135553 -60181212 - MER106B DNA MER1_type 0 1059 898 259 280 60 30 chr10 80136057 80136157 -60180608 - L2 LINE L2 -7 3265 3163 1781 84 4 8 chr10 80136935 80137174 -60179591 - AluY SINE Alu -73 238 1 1861 88 0 0 chr10 80140772 80141012 -60175753 + AluSx SINE Alu 1 240 -72 299 336 76 8 chr10 80141969 80142088 -60174677 + L2 LINE L2 3146 3272 0 2179 98 10 0 chr10 80143151 80143447 -60173318 - AluSx SINE Alu -13 299 1 1990 116 0 7 chr10 80144060 80144345 -60172420 - AluSx SINE Alu -16 296 14 368 309 94 36 chr10 80144400 80144673 -60172092 - L1MC/D LINE L1 -457 5664 5510 1385 185 12 62 chr10 80144796 80144969 -60171796 - AluJo SINE Alu -3 309 158 1853 107 0 0 chr10 80144969 80145221 -60171544 - AluSc SINE Alu -5 304 53 1385 185 12 62 chr10 80145221 80145372 -60171393 - AluJo SINE Alu -154 158 1 888 150 0 0 chr10 80145415 80145548 -60171217 - FLAM_C SINE Alu 0 133 1 33994 29 5 1 chr10 80147043 80151841 -60164924 + L1PA4 LINE L1 1337 6152 -3 515 247 75 7 chr10 80153056 80153202 -60163563 + L1MB7 LINE L1 6012 6167 -17 770 125 58 8 chr10 80153233 80153353 -60163412 - FLAM_C SINE Alu -16 127 2 1306 129 4 60 chr10 80154247 80154480 -60162285 - AluJb SINE Alu -92 220 1 1449 184 61 20 chr10 80155057 80155351 -60161414 - AluJo SINE Alu -6 306 1 2020 122 0 19 chr10 80156172 80156483 -60160282 + AluSx SINE Alu 1 305 -7 1967 112 0 62 chr10 80156485 80156808 -60159957 + AluSc SINE Alu 1 303 -6 1228 154 211 8 chr10 80157746 80157992 -60158773 + AluJb SINE Alu 1 296 -6 346 279 310 31 chr10 80158149 80158378 -60158387 + HAL1 LINE L1 272 564 -1943 1880 221 111 54 chr10 80158425 80158648 -60158117 + HAL1 LINE L1 796 1005 -1502 2299 89 3 0 chr10 80158648 80158952 -60157813 + AluSx SINE Alu 3 307 -5 1880 221 111 54 chr10 80158952 80159368 -60157397 + HAL1 LINE L1 1005 1493 -1014 1378 151 191 4 chr10 80159368 80159619 -60157146 + AluJb SINE Alu 1 298 -4 1880 221 111 54 chr10 80159619 80159788 -60156977 + HAL1 LINE L1 1493 1651 -856 180 0 0 0 chr10 80159823 80159843 -60156922 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 253 252 0 122 chr10 80160641 80160748 -60156017 + MIR SINE MIR 118 211 -51 891 117 0 29 chr10 80161259 80161396 -60155369 + FLAM_C SINE Alu 1 133 0 2164 105 13 0 chr10 80161406 80161710 -60155055 + AluSx SINE Alu 1 308 -4 327 171 35 206 chr10 80162642 80162812 -60153953 + L2 LINE L2 3173 3313 0 186 43 0 0 chr10 80162824 80162847 -60153918 + (A)n Simple_repeat Simple_repeat 1 23 0 204 206 132 29 chr10 80163169 80163237 -60153528 + MIR3 SINE MIR 5 79 -129 1765 154 3 13 chr10 80163374 80163679 -60153086 - AluJb SINE Alu -10 302 1 2173 118 3 0 chr10 80164614 80164920 -60151845 + AluSq SINE Alu 1 307 -6 933 146 61 6 chr10 80164920 80165084 -60151681 + AluSg/x SINE Alu 132 304 -6 2310 80 0 13 chr10 80165086 80165400 -60151365 + AluSx SINE Alu 1 310 -2 2214 164 34 51 chr10 80165845 80166314 -60150451 - MLT1C LTR MaLR -6 461 1 1649 160 7 14 chr10 80166397 80166685 -60150080 + AluJo SINE Alu 3 288 -24 2021 130 0 3 chr10 80166689 80166990 -60149775 - AluSx SINE Alu -12 300 1 27 108 0 0 chr10 80168626 80168737 -60148028 + GC_rich Low_complexity Low_complexity 1 111 0 23 0 9 0 chr10 80168801 80168863 -60147902 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 80168897 80168927 -60147838 + GC_rich Low_complexity Low_complexity 1 30 0 294 106 0 0 chr10 80168933 80168980 -60147785 + (TCC)n Simple_repeat Simple_repeat 1 47 0 32 43 0 0 chr10 80169043 80169089 -60147676 + GC_rich Low_complexity Low_complexity 1 46 0 42 48 0 0 chr10 80169148 80169211 -60147554 + GC_rich Low_complexity Low_complexity 1 63 0 544 121 30 20 chr10 80169761 80169860 -60146905 + L1MA5A LINE L1 6183 6282 -15 2177 100 3 0 chr10 80169987 80170278 -60146487 - AluSq SINE Alu -20 293 2 1248 92 22 11 chr10 80170292 80170477 -60146288 - L1PA6 LINE L1 0 6154 5968 881 130 0 0 chr10 80170477 80170615 -60146150 + MER75 DNA T2_type 263 400 -114 1222 110 0 0 chr10 80170618 80170791 -60145974 - AluSg/x SINE Alu -3 309 137 2365 303 23 26 chr10 80220867 80221683 -60095082 - HERV16 LTR ERVL -1260 4394 3581 706 306 53 48 chr10 80221658 80222093 -60094672 - HERV16 LTR ERVL -4400 596 160 * 980 262 88 64 chr10 80222225 80222648 -60094117 - LTR16A1 LTR ERVL -19 438 6 329 231 109 61 chr10 80222656 80222741 -60094024 - L2 LINE L2 -1220 2094 2015 1725 175 148 13 chr10 80222741 80223118 -60093647 - MSTC LTR MaLR 0 428 1 329 231 109 61 chr10 80223118 80223261 -60093504 - L2 LINE L2 -1299 2015 1855 396 0 0 0 chr10 80224273 80224317 -60092448 + (CA)n Simple_repeat Simple_repeat 2 45 0 296 283 38 9 chr10 80224317 80224423 -60092342 + MER112 DNA MER1_type 98 206 -54 204 219 0 0 chr10 80231194 80231235 -60085530 + GA-rich Low_complexity Low_complexity 4 44 0 195 261 206 11 chr10 80233801 80233893 -60082872 + L2 LINE L2 3162 3271 -1 1719 153 44 7 chr10 80238632 80238927 -60077838 - AluJb SINE Alu -6 306 1 2402 67 3 0 chr10 80238951 80239250 -60077515 + AluY SINE Alu 1 300 -11 1269 99 0 22 chr10 80239251 80239433 -60077332 + AluY SINE Alu 133 310 -1 238 261 236 46 chr10 80239476 80239671 -60077094 + L2 LINE L2 2945 3176 -96 491 276 48 2 chr10 80242242 80242422 -60074343 + MIR SINE MIR 33 230 -32 210 332 82 19 chr10 80243944 80244079 -60072686 - MIR SINE MIR -58 150 20 322 340 60 11 chr10 80244836 80245101 -60071664 + L1ME4a LINE L1 5649 5926 -195 21 0 0 0 chr10 80245169 80245190 -60071575 + AT_rich Low_complexity Low_complexity 1 21 0 190 345 158 12 chr10 80246082 80246247 -60070518 + L3 LINE CR1 1015 1203 -374 295 349 82 15 chr10 80246460 80246655 -60070110 + L3 LINE CR1 1363 1570 -7 183 301 80 62 chr10 80248032 80248145 -60068620 - MIR3 SINE MIR -42 166 52 287 346 9 19 chr10 80248238 80248345 -60068420 - MIR3 SINE MIR -89 119 14 201 74 0 0 chr10 80248955 80248982 -60067783 + (GGGTG)n Simple_repeat Simple_repeat 5 31 0 219 146 0 0 chr10 80249829 80249870 -60066895 + (CTG)n Simple_repeat Simple_repeat 3 43 0 325 287 46 17 chr10 80250183 80250311 -60066454 - MIR SINE MIR -76 132 5 261 83 0 0 chr10 80253556 80253592 -60063173 + (TG)n Simple_repeat Simple_repeat 2 37 0 261 83 0 0 chr10 80255398 80255434 -60061331 + (TG)n Simple_repeat Simple_repeat 2 37 0 467 282 109 21 chr10 80255838 80256122 -60060643 + L2 LINE L2 2937 3245 -68 228 182 182 15 chr10 80256110 80256176 -60060589 + MIR SINE MIR 87 163 -99 * 263 342 19 25 chr10 80256250 80256408 -60060357 - MER112 DNA MER1_type -95 165 9 354 294 26 32 chr10 80258456 80258616 -60058149 + MIR SINE MIR 98 256 -6 223 341 163 0 chr10 80258637 80258760 -60058005 - MIR SINE MIR -13 249 107 437 175 83 50 chr10 80259174 80259294 -60057471 + MIR SINE MIR 28 151 -111 618 281 20 0 chr10 80260556 80260702 -60056063 - MIR SINE MIR -106 156 8 251 231 0 0 chr10 80262095 80262160 -60054605 + MIR SINE MIR 66 130 -78 1661 185 3 3 chr10 80263376 80263668 -60053097 + AluJo SINE Alu 4 295 -17 1609 171 41 3 chr10 80263674 80263966 -60052799 + AluSx SINE Alu 6 308 -4 9411 52 5 127 chr10 80263969 80265516 -60051249 + SVA Other Other 29 1385 -1 221 0 0 33 chr10 80265523 80265553 -60051212 + (TAA)n Simple_repeat Simple_repeat 2 30 0 262 273 0 0 chr10 80265737 80265803 -60050962 + MIR3 SINE MIR 143 208 0 228 283 71 71 chr10 80266844 80266957 -60049808 + MIR SINE MIR 39 151 -111 248 212 78 36 chr10 80267701 80267784 -60048981 + MIR SINE MIR 64 141 -67 291 230 111 18 chr10 80268084 80268207 -60048558 - MIR SINE MIR -62 146 23 246 388 0 0 chr10 80268467 80268547 -60048218 + MER91A DNA MER1_type 1 80 -116 1940 147 13 13 chr10 80270285 80270597 -60046168 + AluSx SINE Alu 1 312 0 432 311 97 61 chr10 80271480 80271640 -60045125 + MIR SINE MIR 5 177 -85 1974 120 6 54 chr10 80271640 80271956 -60044809 - AluSx SINE Alu -11 301 1 432 311 97 61 chr10 80271956 80272023 -60044742 + MIR SINE MIR 177 240 -22 218 264 69 14 chr10 80272234 80272306 -60044459 + MIR SINE MIR 118 193 -69 340 280 45 38 chr10 80272448 80272580 -60044185 + MIR SINE MIR 33 165 -97 293 276 0 11 chr10 80273386 80273473 -60043292 + HsTC2 DNA Tc2 1795 1880 -18 396 0 0 0 chr10 80274452 80274496 -60042269 + (TG)n Simple_repeat Simple_repeat 2 45 0 227 241 19 0 chr10 80275188 80275242 -60041523 + L2 LINE L2 3200 3254 -18 207 361 0 0 chr10 80275336 80275397 -60041368 + L2 LINE L2 3234 3294 -19 1147 233 9 4 chr10 80276272 80276504 -60040261 + MIR SINE MIR 9 241 -21 235 282 173 0 chr10 80277732 80277842 -60038923 + MIR3 SINE MIR 45 173 -35 208 337 79 20 chr10 80278006 80278107 -60038658 - MIR3 SINE MIR -21 187 81 237 65 0 0 chr10 80278467 80278498 -60038267 + (A)n Simple_repeat Simple_repeat 1 31 0 1114 162 11 21 chr10 80281562 80281753 -60035012 - MER5A DNA MER1_type 0 189 1 243 312 118 0 chr10 80282170 80282263 -60034502 - MIR SINE MIR -17 245 142 332 285 106 8 chr10 80283004 80283127 -60033638 - MIR SINE MIR -70 192 58 533 294 126 26 chr10 80283460 80283769 -60032996 + L2 LINE L2 2952 3291 -22 395 291 95 58 chr10 80283946 80284040 -60032725 + L1M4 LINE L1 4957 5046 -1100 2170 101 13 0 chr10 80284040 80284338 -60032427 + AluSx SINE Alu 1 302 -10 395 291 95 58 chr10 80284338 80284484 -60032281 + L1M4 LINE L1 5046 5206 -940 463 201 53 105 chr10 80285398 80285538 -60031227 + MER3 DNA MER1_type 5 132 -77 1899 156 3 13 chr10 80285538 80285853 -60030912 - AluJo SINE Alu 0 312 1 463 201 53 105 chr10 80285853 80285921 -60030844 + MER3 DNA MER1_type 132 202 -7 301 296 34 11 chr10 80285941 80286029 -60030736 + MIR SINE MIR 159 248 -14 204 260 20 0 chr10 80286992 80287042 -60029723 + MIR SINE MIR 72 122 -86 267 213 0 0 chr10 80290018 80290093 -60026672 + (TG)n Simple_repeat Simple_repeat 1 75 0 384 295 54 13 chr10 80292565 80292714 -60024051 - MIR SINE MIR -5 257 103 190 152 0 0 chr10 80293682 80293715 -60023050 - MIR SINE MIR -66 142 110 601 332 47 0 chr10 80293843 80294057 -60022708 - MIR SINE MIR -1 261 38 824 166 194 0 chr10 80294211 80294386 -60022379 + MER3 DNA MER1_type 1 209 0 298 203 86 0 chr10 80295996 80296111 -60020654 - MIR SINE MIR -73 135 7 240 240 1 58 chr10 80296110 80296189 -60020576 + MER5B DNA MER1_type 25 91 -87 * 273 223 158 27 chr10 80297737 80297857 -60018908 + MIR SINE MIR 20 165 -43 775 221 54 44 chr10 80298003 80298207 -60018558 + MER3 DNA MER1_type 1 206 -3 341 272 78 10 chr10 80298487 80298590 -60018175 - L2 LINE L2 -6 3266 3157 206 231 62 15 chr10 80298663 80298728 -60018037 + MIR SINE MIR 120 187 -75 27 0 0 0 chr10 80300264 80300291 -60016474 + GC_rich Low_complexity Low_complexity 1 27 0 329 364 91 43 chr10 80300489 80300960 -60015805 - HAL1 LINE L1 -1185 1322 881 304 380 7 20 chr10 80301078 80301254 -60015511 + GA-rich Low_complexity Low_complexity 3 299 0 24 53 0 0 chr10 80301474 80301512 -60015253 + GC_rich Low_complexity Low_complexity 1 38 0 279 0 0 0 chr10 80303123 80303154 -60013611 + (A)n Simple_repeat Simple_repeat 1 31 0 478 247 72 36 chr10 80304886 80305052 -60011713 - MIR SINE MIR -2 260 89 288 315 94 21 chr10 80305080 80305232 -60011533 - MIR3 SINE MIR -57 151 4 246 359 72 3 chr10 80305809 80305988 -60010777 + MIR SINE MIR 1 192 -61 1910 185 118 21 chr10 80305997 80306419 -60010346 + MLT1C LTR MaLR 1 463 -4 746 279 151 32 chr10 80306426 80306995 -60009770 + L2 LINE L2 2693 3312 -1 204 218 0 18 chr10 80307420 80307475 -60009290 + (CCTG)n Simple_repeat Simple_repeat 1 54 0 428 271 9 9 chr10 80307791 80307898 -60008867 - MIR SINE MIR -64 144 38 282 240 322 0 chr10 80308186 80308332 -60008433 + L3 LINE CR1 1354 1546 -31 238 268 0 0 chr10 80308832 80308888 -60007877 + MIR SINE MIR 76 131 -77 361 337 115 8 chr10 80309088 80309324 -60007441 + HAL1b LINE L1 1101 6121 0 283 331 169 0 chr10 80309578 80309756 -60007009 + L2 LINE L2 2614 2821 -493 1592 210 80 0 chr10 80310179 80310517 -60006248 + MLT1A1 LTR MaLR 1 365 0 315 352 69 0 chr10 80310852 80310997 -60005768 - MIR SINE MIR -51 211 57 304 316 45 23 chr10 80311172 80311305 -60005460 + MIR3 SINE MIR 57 192 -16 458 309 64 25 chr10 80311553 80311757 -60005008 - MIR SINE MIR -17 245 34 2024 128 3 13 chr10 80311916 80312246 -60004519 + AluSq SINE Alu 1 313 0 1055 184 25 25 chr10 80312253 80312294 -60004471 + AluJo SINE Alu 85 125 -187 218 0 94 0 chr10 80312294 80312326 -60004439 + A-rich Low_complexity Low_complexity 2 36 0 1055 184 25 25 chr10 80312326 80312485 -60004280 + AluJo SINE Alu 124 285 -27 2307 129 43 3 chr10 80312795 80313145 -60003620 - MER47A DNA MER2_type -1 365 2 4243 183 46 19 chr10 80313152 80314248 -60002517 - L1MB8 LINE L1 0 6178 5051 237 231 19 0 chr10 80314223 80314275 -60002490 + L1M4 LINE L1 4044 4096 -2050 * 316 253 13 13 chr10 80314279 80314354 -60002411 - L1MB8 LINE L1 -1076 5070 4996 1001 202 9 5 chr10 80314354 80314567 -60002198 - AluJo SINE Alu -3 309 96 3088 218 54 6 chr10 80314574 80315441 -60001324 - L1MB8 LINE L1 -1134 5012 4104 959 185 5 33 chr10 80315451 80315635 -60001130 + AluJo SINE Alu 1 179 -133 242 341 92 6 chr10 80316203 80316367 -60000398 + MIR SINE MIR 85 262 0 1531 85 0 22 chr10 80316383 80316562 -60000203 - AluSg/x SINE Alu 0 312 137 2328 74 3 0 chr10 80316562 80316858 -59999907 - AluSx SINE Alu -15 297 1 1531 85 0 22 chr10 80316858 80316901 -59999864 - AluSg/x SINE Alu -175 137 95 271 344 32 0 chr10 80317598 80317691 -59999074 + MIR SINE MIR 132 227 -35 393 270 115 11 chr10 80317793 80317960 -59998805 + MIR SINE MIR 37 222 -40 342 195 26 0 chr10 80318296 80318373 -59998392 - MLT1F1 LTR MaLR -1 566 488 288 278 11 22 chr10 80319175 80319255 -59997510 + L2 LINE L2 3179 3257 -15 383 332 35 8 chr10 80319255 80319396 -59997369 + MIR3 SINE MIR 4 147 -65 767 287 25 75 chr10 80319396 80319755 -59997010 + MER102b DNA MER1_type 1 341 0 224 287 148 33 chr10 80320460 80320582 -59996183 + MIR3 SINE MIR 6 141 -67 233 242 158 57 chr10 80321438 80321606 -59995159 - MIR3 SINE MIR -61 147 13 * 239 336 13 40 chr10 80321515 80321664 -59995101 + MIR3 SINE MIR 32 176 -32 218 263 64 40 chr10 80322784 80322944 -59993821 + MIR SINE MIR 1 167 -41 227 179 89 0 chr10 80325156 80325212 -59991553 - MIR SINE MIR -83 125 65 184 237 68 0 chr10 80325442 80325501 -59991264 + MIR SINE MIR 122 184 -78 201 245 0 20 chr10 80325793 80325842 -59990923 + GA-rich Low_complexity Low_complexity 1 48 0 2272 156 61 0 chr10 80330664 80331055 -59985710 + MSTA LTR MaLR 2 416 -12 378 276 78 9 chr10 80331746 80331862 -59984903 - MIR3 SINE MIR -46 162 39 255 152 0 0 chr10 80332057 80332103 -59984662 + (TG)n Simple_repeat Simple_repeat 2 47 0 312 324 144 12 chr10 80332351 80332524 -59984241 + L3 LINE CR1 1377 1572 -5 1719 141 4 0 chr10 80332612 80332882 -59983883 - AluSx SINE Alu 0 312 42 806 146 0 56 chr10 80333726 80333870 -59982895 + AluJo SINE Alu 26 161 -151 1638 173 11 3 chr10 80334181 80334465 -59982300 + AluJo SINE Alu 11 296 -16 23 0 0 0 chr10 80334471 80334494 -59982271 + AT_rich Low_complexity Low_complexity 1 23 0 1125 273 150 12 chr10 80334610 80335104 -59981661 + MLT1F1 LTR MaLR 1 562 -5 829 181 0 0 chr10 80335379 80335512 -59981253 - FLAM_C SINE Alu 0 133 1 267 314 220 0 chr10 80335535 80335653 -59981112 - L2 LINE L2 0 3272 3129 410 254 30 82 chr10 80335707 80335841 -59980924 - MIR SINE MIR -36 226 100 261 315 133 17 chr10 80335928 80336223 -59980542 - LTR16B LTR ERVL -10 440 102 205 330 34 0 chr10 80336537 80336625 -59980140 + MIR SINE MIR 147 237 -25 235 333 115 0 chr10 80337754 80337850 -59978915 + L3 LINE CR1 921 1027 -550 196 260 10 19 chr10 80338153 80338257 -59978508 + (TGGA)n Simple_repeat Simple_repeat 1 103 0 261 301 0 44 chr10 80338346 80338482 -59978283 + L1ME3 LINE L1 5082 5211 -935 1318 194 47 47 chr10 80338482 80338781 -59977984 + AluJo SINE Alu 1 299 -13 438 114 0 0 chr10 80338781 80338851 -59977914 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 1527 213 47 39 chr10 80338851 80339316 -59977449 + L1ME3 LINE L1 5193 5663 -499 734 195 0 0 chr10 80339317 80339435 -59977330 + FLAM_C SINE Alu 2 119 -24 22 0 0 0 chr10 80339435 80339457 -59977308 + AT_rich Low_complexity Low_complexity 1 22 0 2232 89 0 22 chr10 80339457 80339772 -59976993 + AluY SINE Alu 1 308 -3 848 190 92 0 chr10 80339772 80339956 -59976809 + L1ME3 LINE L1 5657 5857 -309 833 272 24 26 chr10 80339962 80340268 -59976497 - MLT1G3 LTR MaLR -255 275 1 23 0 0 0 chr10 80340384 80340407 -59976358 + AT_rich Low_complexity Low_complexity 1 23 0 831 177 0 0 chr10 80340413 80340554 -59976211 - FRAM SINE Alu -16 160 20 789 236 95 16 chr10 80340566 80340808 -59975957 + L1ME3 LINE L1 5898 6158 -4 212 330 57 0 chr10 80341294 80341382 -59975383 + MIR3 SINE MIR 88 180 -28 2378 237 42 30 chr10 80341922 80342611 -59974154 - L1ME2 LINE L1 -9 6155 5459 1794 221 21 0 chr10 80342633 80343014 -59973751 + L1MB8 LINE L1 5734 6122 -56 195 42 0 0 chr10 80343304 80343328 -59973437 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 424 225 0 11 chr10 80343329 80343418 -59973347 - L2 LINE L2 -11 3302 3215 1839 156 0 13 chr10 80344793 80345095 -59971670 - AluJo SINE Alu -14 298 1 392 307 192 13 chr10 80345550 80345863 -59970902 - MLT1G LTR MaLR -11 579 211 720 204 14 0 chr10 80346025 80346197 -59970568 - L1ME2 LINE L1 -855 5291 5122 * 1691 286 39 25 chr10 80346190 80346745 -59970020 - L1M4b LINE L1 -6055 804 169 698 226 14 0 chr10 80346883 80347029 -59969736 - L1M4b LINE L1 -6710 149 2 506 209 27 9 chr10 80347078 80347188 -59969577 - MER57A LTR ERV1 0 403 292 2428 149 30 0 chr10 80347636 80348033 -59968732 + L1MA6 LINE L1 5892 6300 0 1792 169 0 29 chr10 80348136 80348449 -59968316 + AluJb SINE Alu 1 304 -8 330 132 0 0 chr10 80348624 80348677 -59968088 + (CA)n Simple_repeat Simple_repeat 2 54 0 1768 214 19 96 chr10 80349781 80349806 -59966959 + MLT2B1 LTR ERVL 1 26 -494 1526 194 17 14 chr10 80349806 80350099 -59966666 - AluJo SINE Alu -18 294 1 1768 214 19 96 chr10 80350099 80350587 -59966178 + MLT2B1 LTR ERVL 26 472 -48 207 0 0 0 chr10 80350587 80350610 -59966155 + (CA)n Simple_repeat Simple_repeat 2 24 0 1768 214 19 96 chr10 80350610 80350637 -59966128 + MLT2B1 LTR ERVL 472 500 -20 1296 251 125 45 chr10 80350779 80350904 -59965861 + L1MCc LINE L1 44 158 -6265 2246 96 3 6 chr10 80350904 80351216 -59965549 + AluSx SINE Alu 1 311 -1 1296 251 125 45 chr10 80351216 80351603 -59965162 + L1MCc LINE L1 158 597 -5826 276 333 17 34 chr10 80351625 80351742 -59965023 + L1MCc LINE L1 655 769 -5654 1688 259 153 29 chr10 80351754 80352097 -59964668 + L1MCc LINE L1 867 1166 -5775 2505 117 28 58 chr10 80352097 80352524 -59964241 - MLT2D LTR ERVL 0 414 1 1688 259 153 29 chr10 80352524 80353108 -59963657 + L1MCc LINE L1 1166 1676 -5265 240 35 0 0 chr10 80353108 80353137 -59963628 + (CA)n Simple_repeat Simple_repeat 1 29 0 1688 259 153 29 chr10 80353137 80353318 -59963447 + L1MCc LINE L1 1676 1833 -5108 592 90 20 60 chr10 80353318 80353418 -59963347 - L1MA1 LINE L1 0 6302 6207 1688 259 153 29 chr10 80353418 80353760 -59963005 + L1MCc LINE L1 1833 2131 -4810 1155 71 0 13 chr10 80353760 80353915 -59962850 + L1PA8 LINE L1 6020 6172 0 1688 259 153 29 chr10 80353915 80354123 -59962642 + L1MCc LINE L1 2131 2740 -4201 1362 175 77 33 chr10 80354148 80354212 -59962553 - MLT1D LTR MaLR -3 502 442 2083 115 0 0 chr10 80354212 80354532 -59962233 + AluSg1 SINE Alu 1 309 0 1362 175 77 33 chr10 80354532 80354804 -59961961 - MLT1D LTR MaLR -63 442 151 332 234 75 0 chr10 80354931 80355025 -59961740 - MER58 DNA MER1_type -2319 101 1 653 215 8 0 chr10 80356077 80356207 -59960558 + MLT1H LTR MaLR 61 191 -358 403 281 43 30 chr10 80356301 80356465 -59960300 + MLT1H LTR MaLR 384 549 0 605 252 210 48 chr10 80356655 80356964 -59959801 + MLT1J2 LTR MaLR 74 432 -18 693 268 24 0 chr10 80358299 80358463 -59958302 + MIR SINE MIR 63 230 -32 499 216 7 43 chr10 80359141 80359778 -59956987 + (TG)n Simple_repeat Simple_repeat 1 613 0 196 207 8 33 chr10 80359842 80359963 -59956802 + (TG)n Simple_repeat Simple_repeat 1 118 0 371 243 6 40 chr10 80359975 80360148 -59956617 + (TG)n Simple_repeat Simple_repeat 1 167 0 381 255 0 43 chr10 80360165 80360349 -59956416 + (TG)n Simple_repeat Simple_repeat 1 176 0 204 306 28 0 chr10 80360778 80360850 -59955915 + MIR SINE MIR 67 140 -122 192 331 83 23 chr10 80361173 80361306 -59955459 + L3 LINE CR1 1321 1461 -116 563 259 29 35 chr10 80361480 80361650 -59955115 - MIR SINE MIR -56 206 38 277 192 0 0 chr10 80362486 80362538 -59954227 + MIR SINE MIR 95 146 -62 300 263 15 22 chr10 80363063 80363200 -59953565 + (TCTCTG)n Simple_repeat Simple_repeat 3 138 0 636 273 15 25 chr10 80364173 80364371 -59952394 + MIR3 SINE MIR 5 200 -8 24 53 0 0 chr10 80366046 80366084 -59950681 + AT_rich Low_complexity Low_complexity 1 38 0 496 224 109 0 chr10 80367931 80368087 -59948678 - MER5B DNA MER1_type -5 173 1 420 280 88 63 chr10 80368153 80368392 -59948373 - Charlie8 DNA MER1_type -2172 245 1 183 200 0 0 chr10 80369479 80369514 -59947251 - MIR SINE MIR -174 88 54 427 309 64 25 chr10 80371102 80371306 -59945459 - MIR SINE MIR -17 245 34 2172 116 3 0 chr10 80371465 80371775 -59944990 + AluSx SINE Alu 1 311 -1 2048 133 13 0 chr10 80371799 80372100 -59944665 + AluSq SINE Alu 1 305 -8 181 277 20 0 chr10 80373098 80373199 -59943566 + GA-rich Low_complexity Low_complexity 1 103 0 518 272 54 0 chr10 80373297 80373444 -59943321 + MIR SINE MIR 52 206 -56 234 354 10 0 chr10 80374252 80374351 -59942414 - MIR SINE MIR -66 142 43 281 246 0 0 chr10 80375050 80375115 -59941650 + MIR SINE MIR 80 144 -118 718 280 60 18 chr10 80375709 80375927 -59940838 - MIR SINE MIR -16 246 20 498 332 70 5 chr10 80376212 80376426 -59940339 + MIR SINE MIR 29 256 -6 873 107 25 0 chr10 80377773 80377895 -59938870 - FLAM_C SINE Alu -18 125 1 406 279 48 20 chr10 80377898 80378160 -59938605 - MER113 DNA MER1_type? -206 315 4 1023 230 62 14 chr10 80378285 80378576 -59938189 + LTR16C LTR ERVL 187 491 0 345 260 124 68 chr10 80379049 80379299 -59937466 - L1ME4a LINE L1 -56 6065 5802 330 335 92 21 chr10 80380988 80381227 -59935538 - Charlie8 DNA MER1_type -2161 256 1 261 180 0 0 chr10 80382049 80382099 -59934666 + (CA)n Simple_repeat Simple_repeat 2 51 0 373 305 11 23 chr10 80382265 80382439 -59934326 + (CATATA)n Simple_repeat Simple_repeat 1 172 0 * 513 298 6 11 chr10 80382351 80382532 -59934233 + (CA)n Simple_repeat Simple_repeat 1 180 0 201 311 68 88 chr10 80383077 80383225 -59933540 - MIR SINE MIR -11 251 107 228 355 26 40 chr10 80383527 80383679 -59933086 + MIR SINE MIR 92 241 -21 419 323 23 8 chr10 80383832 80383962 -59932803 + MIR3 SINE MIR 9 140 -68 287 313 137 37 chr10 80384190 80384718 -59932047 + L2 LINE L2 2557 3160 -153 228 100 0 0 chr10 80384718 80384758 -59932007 + (CA)n Simple_repeat Simple_repeat 2 41 0 287 313 137 37 chr10 80384758 80384798 -59931967 + L2 LINE L2 3160 3195 -118 1972 157 0 3 chr10 80384838 80385150 -59931615 - AluJb SINE Alu 0 312 2 336 200 13 0 chr10 80385151 80385226 -59931539 + MER58A DNA MER1_type 46 121 0 271 344 41 0 chr10 80385267 80385389 -59931376 + L2 LINE L2 3174 3300 -13 201 263 90 90 chr10 80385854 80385889 -59930876 - MIR SINE MIR -20 242 208 2526 51 0 6 chr10 80385889 80386201 -59930564 - AluY SINE Alu -1 310 1 201 263 90 90 chr10 80386201 80386298 -59930467 - MIR SINE MIR -53 209 110 746 306 18 5 chr10 80386589 80386808 -59929957 + MIR SINE MIR 3 224 -38 197 280 20 0 chr10 80387317 80387367 -59929398 - L2 LINE L2 -1 3312 3262 265 280 13 0 chr10 80387641 80387716 -59929049 + MER5A DNA MER1_type 29 104 -85 2082 115 7 0 chr10 80387744 80388040 -59928725 + AluSq SINE Alu 1 298 -15 512 257 158 27 chr10 80389425 80389608 -59927157 - MIR SINE MIR -49 213 7 324 290 31 24 chr10 80389878 80390037 -59926728 - MIR3 SINE MIR -41 167 8 784 179 17 75 chr10 80390451 80390562 -59926203 + AluJo SINE Alu 11 110 -202 1864 108 87 17 chr10 80390562 80390849 -59925916 - AluSx SINE Alu -5 307 1 784 179 17 75 chr10 80390849 80390910 -59925855 + AluJo SINE Alu 110 173 -139 1668 127 0 62 chr10 80390910 80391202 -59925563 + AluJo SINE Alu 39 312 0 187 267 143 29 chr10 80392062 80392167 -59924598 + MIR SINE MIR 76 192 -70 541 270 84 30 chr10 80392441 80392807 -59923958 + L2 LINE L2 2627 2998 -274 262 316 13 0 chr10 80392919 80392998 -59923767 + L2 LINE L2 3193 3272 0 395 219 92 9 chr10 80393443 80393571 -59923194 + MIR SINE MIR 12 149 -59 212 186 23 0 chr10 80394529 80394572 -59922193 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 392 101 83 18 chr10 80395189 80395298 -59921467 + C-rich Low_complexity Low_complexity 3 118 0 343 116 58 0 chr10 80395638 80395707 -59921058 + C-rich Low_complexity Low_complexity 3 75 0 283 356 30 7 chr10 80396610 80396745 -59920020 + MIR SINE MIR 21 158 -104 240 337 24 0 chr10 80396938 80397021 -59919744 + MIR SINE MIR 158 242 -20 1664 148 3 39 chr10 80397624 80397907 -59918858 - AluJo SINE Alu -16 296 24 182 357 12 0 chr10 80397913 80397997 -59918768 + MIR3 SINE MIR 70 154 -54 182 354 156 0 chr10 80398044 80398140 -59918625 + MIR SINE MIR 51 161 -101 204 292 62 0 chr10 80398253 80398318 -59918447 + L2 LINE L2 3158 3226 -46 391 204 18 30 chr10 80398718 80398885 -59917880 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 238 277 7 15 chr10 80398896 80399033 -59917732 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 227 359 70 26 chr10 80399057 80399213 -59917552 - L2 LINE L2 -24 3248 3086 194 293 183 0 chr10 80399914 80399996 -59916769 - MIR SINE MIR -109 153 57 450 350 89 0 chr10 80400749 80400929 -59915836 - MIR SINE MIR -58 204 9 793 171 0 50 chr10 80401269 80401409 -59915356 - FLAM_C SINE Alu 0 133 1 259 108 62 0 chr10 80401409 80401474 -59915291 + Charlie1 DNA MER1_type 2581 2649 -112 239 133 22 0 chr10 80401474 80401519 -59915246 + CT-rich Low_complexity Low_complexity 3 48 0 697 168 118 0 chr10 80401525 80401644 -59915121 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr10 80401650 80401673 -59915092 + AT_rich Low_complexity Low_complexity 1 23 0 211 216 75 119 chr10 80401746 80401880 -59914885 - MIR SINE MIR -102 160 33 2393 92 0 0 chr10 80402400 80402705 -59914060 - AluSq SINE Alu -8 305 1 243 88 0 0 chr10 80402795 80402829 -59913936 + (TG)n Simple_repeat Simple_repeat 2 35 0 384 317 21 0 chr10 80403016 80403172 -59913593 - MIR SINE MIR -63 145 2 341 256 60 38 chr10 80403598 80403731 -59913034 - MIR SINE MIR -25 237 102 198 103 0 0 chr10 80403758 80403787 -59912978 + (CCTG)n Simple_repeat Simple_repeat 2 30 0 247 277 48 66 chr10 80404107 80404211 -59912554 - L1MC4a LINE L1 -1884 5924 5823 2111 110 3 0 chr10 80404211 80404502 -59912263 - AluY SINE Alu -19 292 1 247 277 48 66 chr10 80404502 80404563 -59912202 - L1MC4a LINE L1 -1985 5823 5762 2173 102 7 0 chr10 80404681 80404975 -59911790 - AluSx SINE Alu -16 296 1 225 311 98 8 chr10 80404975 80405107 -59911658 - L1MC4a LINE L1 -2077 5731 5588 21 57 0 0 chr10 80405321 80405356 -59911409 + AT_rich Low_complexity Low_complexity 1 35 0 2306 80 20 0 chr10 80405450 80405749 -59911016 - AluY SINE Alu -6 305 1 271 239 325 0 chr10 80405881 80405998 -59910767 - MIR SINE MIR -12 250 96 399 41 0 0 chr10 80406083 80406132 -59910633 + (TG)n Simple_repeat Simple_repeat 1 49 0 189 268 89 0 chr10 80407751 80407807 -59908958 - L2 LINE L2 -18 3254 3194 345 211 0 0 chr10 80407824 80407895 -59908870 - MIR SINE MIR -142 120 50 193 281 104 37 chr10 80410541 80410676 -59906089 - MIR SINE MIR -96 166 23 242 345 54 40 chr10 80410931 80411079 -59905686 + MIR SINE MIR 72 221 -41 380 259 101 61 chr10 80411758 80412002 -59904763 - MIR SINE MIR -10 252 8 239 362 21 0 chr10 80412969 80413116 -59903649 - MIR3 SINE MIR -64 144 6 22 35 0 0 chr10 80413126 80413155 -59903610 + AT_rich Low_complexity Low_complexity 1 29 0 329 279 38 63 chr10 80413246 80413404 -59903361 - MIR3 SINE MIR -21 187 34 648 211 79 47 chr10 80414069 80414259 -59902506 + MIR SINE MIR 2 197 -65 371 312 127 26 chr10 80415604 80415793 -59900972 - MIR SINE MIR -27 235 28 216 299 93 9 chr10 80416000 80416107 -59900658 + MIR3 SINE MIR 46 161 -47 575 300 40 31 chr10 80416171 80416394 -59900371 - MIR SINE MIR -36 226 2 230 394 0 0 chr10 80416461 80416555 -59900210 + MIR3 SINE MIR 100 193 -15 529 272 108 33 chr10 80419161 80419374 -59897391 - MIR SINE MIR -12 250 22 512 239 69 19 chr10 80419701 80419860 -59896905 - MIR SINE MIR -79 183 17 647 354 28 8 chr10 80419882 80420136 -59896629 - MIR SINE MIR -1 261 3 270 81 0 0 chr10 80420315 80420352 -59896413 + (TG)n Simple_repeat Simple_repeat 1 37 0 275 297 32 36 chr10 80420829 80421010 -59895755 - MIR SINE MIR -11 251 3 290 318 26 9 chr10 80421396 80421511 -59895254 + MIR3 SINE MIR 37 160 -48 206 237 0 0 chr10 80421555 80421593 -59895172 + (CA)n Simple_repeat Simple_repeat 1 38 0 184 205 26 0 chr10 80422098 80422137 -59894628 - MER5B DNA MER1_type -37 141 102 277 245 21 75 chr10 80422656 80422750 -59894015 + MIR3 SINE MIR 68 156 -52 186 222 29 0 chr10 80424265 80424322 -59892443 + MIR SINE MIR 63 115 -93 285 310 60 17 chr10 80424331 80424447 -59892318 - L2 LINE L2 -9 3263 3143 420 283 41 7 chr10 80425794 80425939 -59890826 + L1ME4a LINE L1 5972 6121 0 342 299 39 16 chr10 80426811 80426938 -59889827 - MIR3 SINE MIR -45 163 34 352 328 48 0 chr10 80427299 80427424 -59889341 + L2 LINE L2 3183 3313 0 471 35 0 0 chr10 80428063 80428120 -59888645 + (CA)n Simple_repeat Simple_repeat 2 58 0 394 344 148 11 chr10 80429805 80429988 -59886777 + MIR SINE MIR 15 222 -40 197 309 72 21 chr10 80430038 80430135 -59886630 + MIR SINE MIR 1 102 -160 1589 96 55 5 chr10 80430300 80430519 -59886246 + MER30 DNA MER1_type 1 230 0 475 305 76 2 chr10 80431046 80431224 -59885541 + MIR SINE MIR 7 193 -62 183 367 0 0 chr10 80431689 80431749 -59885016 - L2 LINE L2 -5 3308 3249 263 278 77 81 chr10 80431957 80432205 -59884560 + L2 LINE L2 3026 3272 0 188 231 39 0 chr10 80432939 80432991 -59883774 + MIR SINE MIR 91 144 -64 793 171 0 50 chr10 80433023 80433163 -59883602 - FLAM_C SINE Alu 0 133 1 259 108 62 0 chr10 80433163 80433228 -59883537 + Charlie1 DNA MER1_type 2581 2649 -112 618 171 137 0 chr10 80433228 80433392 -59883373 - FLAM_C SINE Alu 0 180 1 211 216 75 119 chr10 80433492 80433626 -59883139 - MIR SINE MIR -102 160 33 2387 95 0 0 chr10 80434145 80434450 -59882315 - AluSq SINE Alu -8 305 1 243 88 0 0 chr10 80434541 80434575 -59882190 + (TG)n Simple_repeat Simple_repeat 2 35 0 384 317 21 0 chr10 80434757 80434913 -59881852 - MIR SINE MIR -63 145 2 341 256 60 38 chr10 80435340 80435473 -59881292 - MIR SINE MIR -25 237 102 198 103 0 0 chr10 80435500 80435529 -59881236 + (CCTG)n Simple_repeat Simple_repeat 2 30 0 247 277 48 66 chr10 80435849 80435953 -59880812 - L1MC4a LINE L1 -1884 5924 5823 2126 110 3 0 chr10 80435953 80436244 -59880521 - AluY SINE Alu -19 292 1 247 277 48 66 chr10 80436244 80436305 -59880460 - L1MC4a LINE L1 -1985 5823 5762 2250 95 3 0 chr10 80436424 80436719 -59880046 - AluSx SINE Alu -16 296 1 225 311 98 8 chr10 80436719 80436851 -59879914 - L1MC4a LINE L1 -2077 5731 5588 21 57 0 0 chr10 80437065 80437100 -59879665 + AT_rich Low_complexity Low_complexity 1 35 0 2306 80 20 0 chr10 80437194 80437493 -59879272 - AluY SINE Alu -6 305 1 271 239 325 0 chr10 80437625 80437742 -59879023 - MIR SINE MIR -12 250 96 333 82 0 0 chr10 80437827 80437876 -59878889 + (TG)n Simple_repeat Simple_repeat 1 49 0 189 268 89 0 chr10 80439494 80439550 -59877215 - L2 LINE L2 -18 3254 3194 345 211 0 0 chr10 80439567 80439638 -59877127 - MIR SINE MIR -142 120 50 189 282 113 32 chr10 80442291 80442415 -59874350 - MIR SINE MIR -58 150 33 242 345 54 40 chr10 80442681 80442829 -59873936 + MIR SINE MIR 72 221 -41 380 259 101 61 chr10 80443510 80443754 -59873011 - MIR SINE MIR -10 252 8 239 362 21 0 chr10 80444722 80444869 -59871896 - MIR3 SINE MIR -64 144 6 22 35 0 0 chr10 80444879 80444908 -59871857 + AT_rich Low_complexity Low_complexity 1 29 0 329 279 38 63 chr10 80444999 80445157 -59871608 - MIR3 SINE MIR -21 187 34 648 211 79 47 chr10 80445821 80446011 -59870754 + MIR SINE MIR 2 197 -65 391 311 105 11 chr10 80447358 80447548 -59869217 - MIR SINE MIR -27 235 28 217 299 93 9 chr10 80447757 80447864 -59868901 + MIR3 SINE MIR 46 161 -47 575 300 40 31 chr10 80447928 80448151 -59868614 - MIR SINE MIR -36 226 2 230 394 0 0 chr10 80448220 80448314 -59868451 + MIR3 SINE MIR 100 193 -15 560 271 108 37 chr10 80450922 80451136 -59865629 - MIR SINE MIR -12 250 22 512 239 69 19 chr10 80451463 80451622 -59865143 - MIR SINE MIR -79 183 17 647 354 28 8 chr10 80451644 80451898 -59864867 - MIR SINE MIR -1 261 3 288 77 0 0 chr10 80452077 80452116 -59864649 + (TG)n Simple_repeat Simple_repeat 1 39 0 275 264 22 22 chr10 80452684 80452775 -59863990 - MIR SINE MIR -169 93 3 290 318 26 9 chr10 80453160 80453275 -59863490 + MIR3 SINE MIR 37 160 -48 184 205 26 0 chr10 80453863 80453902 -59862863 - MER5B DNA MER1_type -37 141 102 294 234 21 75 chr10 80454421 80454515 -59862250 + MIR3 SINE MIR 68 156 -52 207 246 127 14 chr10 80455992 80456086 -59860679 + MIR SINE MIR 18 124 -93 285 310 60 17 chr10 80456095 80456211 -59860554 - L2 LINE L2 -9 3263 3143 382 285 49 7 chr10 80457559 80457703 -59859062 + L1ME4a LINE L1 5972 6121 0 342 299 39 16 chr10 80458575 80458702 -59858063 - MIR3 SINE MIR -45 163 34 352 328 48 0 chr10 80459063 80459188 -59857577 + L2 LINE L2 3183 3313 0 429 20 0 0 chr10 80459836 80459886 -59856879 + (CA)n Simple_repeat Simple_repeat 1 50 0 363 311 0 87 chr10 80461571 80461732 -59855033 + MIR SINE MIR 15 161 -101 184 313 83 21 chr10 80461800 80461896 -59854869 + MIR SINE MIR 1 102 -160 1589 96 55 5 chr10 80462061 80462280 -59854485 + MER30 DNA MER1_type 1 230 0 488 298 76 2 chr10 80462807 80462985 -59853780 + MIR SINE MIR 7 193 -62 183 367 0 0 chr10 80463450 80463510 -59853255 - L2 LINE L2 -5 3308 3249 272 274 77 81 chr10 80463718 80463966 -59852799 + L2 LINE L2 3026 3272 0 232 171 0 0 chr10 80464687 80464728 -59852037 + MIR SINE MIR 109 149 -59 212 269 86 11 chr10 80465134 80465227 -59851538 - MIR3 SINE MIR -11 197 98 438 356 23 28 chr10 80465260 80465437 -59851328 + MER5A DNA MER1_type 14 189 0 426 289 60 36 chr10 80465657 80465823 -59850942 - MIR SINE MIR -90 172 3 194 349 0 0 chr10 80465862 80465925 -59850840 + L3 LINE CR1 1428 1490 -87 245 253 40 0 chr10 80466778 80466853 -59849912 - MER117 DNA MER1_type -74 123 46 193 219 24 0 chr10 80468034 80468075 -59848690 + MIR SINE MIR 103 144 -64 238 91 45 0 chr10 80468131 80468175 -59848590 + Charlie5 DNA MER1_type 2361 2406 -206 486 0 0 0 chr10 80469459 80469513 -59847252 + (CA)n Simple_repeat Simple_repeat 1 54 0 237 191 0 32 chr10 80469956 80470019 -59846746 + (CA)n Simple_repeat Simple_repeat 1 61 0 253 221 0 140 chr10 80470660 80470796 -59845969 - L3 LINE CR1 -84 1493 1377 315 0 0 0 chr10 80471021 80471056 -59845709 + (CTCA)n Simple_repeat Simple_repeat 1 35 0 263 306 24 24 chr10 80471160 80471245 -59845520 - MIR SINE MIR -63 145 61 234 286 248 25 chr10 80471810 80471971 -59844794 + MIR SINE MIR 47 243 -19 423 284 16 8 chr10 80472010 80472137 -59844628 - MIR SINE MIR -78 184 57 299 234 279 27 chr10 80472773 80472884 -59843881 - MIR SINE MIR -96 166 28 314 318 72 46 chr10 80473559 80473754 -59843011 + MIR SINE MIR 56 255 -7 337 308 150 23 chr10 80473890 80474302 -59842463 - L2 LINE L2 -229 3043 2561 201 410 35 7 chr10 80474483 80474627 -59842138 + MIR3 SINE MIR 31 178 -30 485 327 23 41 chr10 80474802 80475022 -59841743 + MIR SINE MIR 9 224 -38 401 304 22 43 chr10 80475224 80475362 -59841403 - MIR3 SINE MIR -39 169 35 349 296 30 37 chr10 80475600 80475735 -59841030 - MIR SINE MIR -122 140 7 289 303 110 65 chr10 80475798 80475953 -59840812 - MIR SINE MIR -67 195 34 253 254 0 0 chr10 80477008 80477063 -59839702 + MIR SINE MIR 77 131 -77 315 0 0 0 chr10 80478056 80478091 -59838674 + (CA)n Simple_repeat Simple_repeat 1 35 0 180 325 149 0 chr10 80478199 80478313 -59838452 - MIR SINE MIR -71 191 61 196 333 109 52 chr10 80478374 80478548 -59838217 + L2 LINE L2 2996 3179 -93 224 200 86 14 chr10 80479218 80479288 -59837477 + MIR SINE MIR 102 176 -86 456 194 97 24 chr10 80480361 80480485 -59836280 + MIR SINE MIR 60 192 -70 300 288 68 30 chr10 80481650 80481782 -59834983 + MIR SINE MIR 12 149 -59 467 252 99 7 chr10 80482664 80482815 -59833950 - MIR SINE MIR -90 172 8 242 267 142 0 chr10 80482870 80482932 -59833833 - MER5B DNA MER1_type -41 137 85 2026 154 0 3 chr10 80482932 80483243 -59833522 - AluJb SINE Alu -2 310 1 242 267 142 0 chr10 80483243 80483300 -59833465 - MER5B DNA MER1_type -93 85 1 268 288 61 32 chr10 80483301 80483445 -59833320 - MIR3 SINE MIR -50 158 11 208 289 100 0 chr10 80484160 80484250 -59832515 - MIR SINE MIR -79 183 85 366 303 77 13 chr10 80484816 80484971 -59831794 - MIR3 SINE MIR -43 165 1 202 143 29 0 chr10 80486286 80486321 -59830444 + (CAGAGA)n Simple_repeat Simple_repeat 1 36 0 195 277 0 0 chr10 80486709 80486756 -59830009 + L3 LINE CR1 1424 1470 -107 218 234 62 16 chr10 80487909 80487973 -59828792 + L2 LINE L2 3244 3310 -3 320 62 0 21 chr10 80488484 80488532 -59828233 + (CA)n Simple_repeat Simple_repeat 2 48 0 1609 192 38 3 chr10 80489450 80489737 -59827028 + AluJb SINE Alu 1 297 -15 202 265 0 0 chr10 80489769 80489818 -59826947 - MIR SINE MIR -50 212 164 433 255 92 21 chr10 80489894 80490035 -59826730 - MIR SINE MIR -97 165 15 374 330 18 9 chr10 80490249 80490504 -59826261 + GA-rich Low_complexity Low_complexity 1 257 0 455 263 59 0 chr10 80490955 80491073 -59825692 + MIR SINE MIR 22 146 -62 274 302 124 8 chr10 80491123 80491252 -59825513 + MIR SINE MIR 6 149 -113 242 366 71 29 chr10 80491609 80491959 -59824806 + L2 LINE L2 2898 3262 -10 229 266 0 31 chr10 80491955 80492019 -59824746 - L2 LINE L2 -206 3066 3005 * 268 303 67 0 chr10 80492159 80492248 -59824517 - MIR SINE MIR -137 125 31 217 354 23 39 chr10 80492859 80492989 -59823776 + L2 LINE L2 2887 3014 -258 1456 319 31 8 chr10 80492991 80493602 -59823163 + L2 LINE L2 2042 2666 -648 633 354 145 5 chr10 80493596 80493764 -59823001 + L2 LINE L2 2804 2947 -366 * 1493 158 0 0 chr10 80493764 80493992 -59822773 + AluJb SINE Alu 1 228 -84 633 354 145 5 chr10 80493992 80494270 -59822495 + L2 LINE L2 2947 3313 0 1368 161 5 0 chr10 80494478 80494696 -59822069 + AluJb SINE Alu 89 307 -5 199 297 31 0 chr10 80494696 80494760 -59822005 + L2 LINE L2 3247 3312 -1 371 230 24 6 chr10 80494767 80494932 -59821833 + (TGGA)n Simple_repeat Simple_repeat 4 171 0 303 247 13 13 chr10 80495081 80495158 -59821607 + MIR SINE MIR 77 153 -109 377 155 250 0 chr10 80498330 80498446 -59818319 - MER69 DNA AcHobo 0 2526 2382 556 201 201 0 chr10 80498708 80498862 -59817903 - MIR SINE MIR -40 222 38 277 219 62 0 chr10 80499244 80499308 -59817457 - MIR3 SINE MIR -53 155 88 204 344 0 16 chr10 80499660 80499724 -59817041 - MIR3 SINE MIR -37 171 109 2012 89 43 0 chr10 80500357 80500637 -59816128 + AluSq SINE Alu 3 294 -19 278 277 124 0 chr10 80501072 80501239 -59815526 + MIR SINE MIR 1 192 -16 198 287 117 43 chr10 80502173 80502361 -59814404 - L2 LINE L2 -214 3058 2857 244 333 34 48 chr10 80502724 80502871 -59813894 + MIR3 SINE MIR 15 159 -49 727 300 46 4 chr10 80504630 80504867 -59811898 - MIR SINE MIR -14 248 2 456 248 67 0 chr10 80506088 80506193 -59810572 + MER81 DNA DNA 3 114 0 352 346 37 7 chr10 80506231 80506367 -59810398 + MIR SINE MIR 109 248 -14 612 287 58 0 chr10 80506435 80506623 -59810142 - MIR SINE MIR 0 262 64 227 279 302 0 chr10 80506969 80507098 -59809667 - MIR SINE MIR -75 187 20 222 275 69 69 chr10 80507753 80507884 -59808881 + MIR3 SINE MIR 13 143 -65 192 274 0 55 chr10 80508732 80508805 -59807960 - MIR SINE MIR -73 135 67 394 269 154 6 chr10 80508919 80509075 -59807690 + L2 LINE L2 2922 3100 -172 377 222 22 11 chr10 80509623 80509713 -59807052 + MIR3 SINE MIR 89 179 -29 185 246 35 18 chr10 80510896 80510953 -59805812 + L2 LINE L2 3234 3291 -22 493 254 79 12 chr10 80511012 80511177 -59805588 + MIR SINE MIR 2 177 -85 456 281 9 0 chr10 80511209 80511323 -59805442 - MIR3 SINE MIR -48 160 46 491 269 102 6 chr10 80512016 80512183 -59804582 - MIR SINE MIR -21 241 59 200 297 72 63 chr10 80512713 80512824 -59803941 + MIR SINE MIR 111 222 -40 219 283 0 91 chr10 80513251 80513350 -59803415 - MIR SINE MIR -85 123 34 568 197 178 13 chr10 80513371 80513523 -59803242 + MER45A DNA AcHobo 1 177 -1 290 314 44 7 chr10 80513587 80513724 -59803041 + L2 LINE L2 2917 3058 -214 372 228 165 8 chr10 80514184 80514280 -59802485 + MIR SINE MIR 57 172 -90 375 367 7 0 chr10 80514280 80514419 -59802346 + MIR SINE MIR 3 142 -120 279 376 49 12 chr10 80514755 80514917 -59801848 - MIR SINE MIR -13 249 82 545 271 60 56 chr10 80515869 80516108 -59800657 + MIR SINE MIR 3 241 -21 317 198 91 9 chr10 80517302 80517413 -59799352 - MIR SINE MIR -64 144 42 1049 255 81 16 chr10 80517767 80518139 -59798626 + L1ME3A LINE L1 5562 5957 -213 490 240 36 41 chr10 80518141 80518332 -59798433 + MLT1H LTR MaLR 1 234 -315 409 226 89 8 chr10 80518413 80518597 -59798168 + MLT1H LTR MaLR 337 543 -6 549 301 47 0 chr10 80518605 80518798 -59797967 + L1ME3A LINE L1 5960 6161 -9 209 282 100 45 chr10 80519754 80519864 -59796901 + MIR3 SINE MIR 54 169 -39 328 300 46 31 chr10 80520210 80520340 -59796425 + L3 LINE CR1 1350 1481 -96 287 288 51 68 chr10 80520380 80520557 -59796208 + MER5A DNA MER1_type 16 189 0 705 45 0 0 chr10 80520930 80521019 -59795746 + (CA)n Simple_repeat Simple_repeat 1 89 0 243 333 11 73 chr10 80521677 80521854 -59794911 - L2 LINE L2 -179 3093 2928 192 191 294 66 chr10 80522803 80522939 -59793826 + MIR3 SINE MIR 25 191 -17 186 241 0 35 chr10 80523635 80523693 -59793072 - L3b LINE CR1 -203 1380 1325 499 290 41 65 chr10 80525163 80525408 -59791357 - MIR SINE MIR 0 262 24 282 283 20 40 chr10 80525504 80525603 -59791162 - MIR SINE MIR -70 192 96 424 295 58 19 chr10 80525623 80525779 -59790986 - MIR SINE MIR -69 193 32 236 327 94 25 chr10 80527089 80527248 -59789517 + MIR3 SINE MIR 18 187 -21 464 269 134 0 chr10 80528042 80528213 -59788552 - MIR SINE MIR -64 198 5 361 354 7 14 chr10 80528270 80528414 -59788351 + MIR3 SINE MIR 14 156 -52 327 286 98 8 chr10 80529028 80529161 -59787604 - MER117 DNA MER1_type -39 158 14 654 252 108 14 chr10 80529605 80529883 -59786882 + MER113 DNA MER1_type? 22 325 -196 361 254 36 0 chr10 80530079 80530189 -59786576 - MIR3 SINE MIR -86 122 9 396 0 0 0 chr10 80530481 80530525 -59786240 + (CA)n Simple_repeat Simple_repeat 2 45 0 263 314 36 64 chr10 80530953 80531093 -59785672 - MIR SINE MIR -88 174 39 205 279 59 0 chr10 80531271 80531339 -59785426 - MIR3 SINE MIR -33 175 104 573 335 144 14 chr10 80532255 80532622 -59784143 + L2 LINE L2 2899 3313 0 185 228 0 35 chr10 80533508 80533565 -59783200 + MIR SINE MIR 77 131 -77 331 288 29 41 chr10 80534036 80534206 -59782559 + L2 LINE L2 2872 3039 -233 193 286 48 0 chr10 80534532 80534595 -59782170 - MER5A DNA MER1_type -85 104 39 210 293 86 71 chr10 80534850 80534990 -59781775 + L2 LINE L2 2709 2850 -464 812 141 39 0 chr10 80535023 80535151 -59781614 - FLAM_C SINE Alu 0 133 1 251 320 31 23 chr10 80535160 80535288 -59781477 + L2 LINE L2 2976 3104 -168 231 385 13 3 chr10 80536746 80536852 -59779913 + MIR SINE MIR 13 123 -85 983 245 55 24 chr10 80536901 80537154 -59779611 - MIR SINE MIR 0 262 2 447 321 160 19 chr10 80538402 80538776 -59777989 + L2 LINE L2 2862 3288 -25 2285 53 0 7 chr10 80538936 80539247 -59777518 - AluY SINE Alu 0 309 1 509 265 165 15 chr10 80540210 80540410 -59776355 - MIR SINE MIR -13 249 20 1905 164 0 19 chr10 80540492 80540803 -59775962 - AluJb SINE Alu -1 311 7 221 370 20 0 chr10 80540803 80540903 -59775862 - MIR3 SINE MIR -48 160 59 274 311 189 24 chr10 80540930 80541094 -59775671 - MIR SINE MIR -66 196 6 374 328 80 46 chr10 80541718 80541849 -59774916 + MIR SINE MIR 4 148 -114 2131 107 3 0 chr10 80541849 80542192 -59774573 + AluSx SINE Alu 1 312 0 374 328 80 46 chr10 80542192 80542298 -59774467 + MIR SINE MIR 148 249 -13 369 0 0 0 chr10 80542299 80542340 -59774425 + (TG)n Simple_repeat Simple_repeat 2 42 0 283 369 87 0 chr10 80543037 80543140 -59773625 - MIR SINE MIR -68 140 29 214 326 14 95 chr10 80543775 80544060 -59772705 + L2 LINE L2 2933 3194 -78 22 35 0 0 chr10 80544227 80544256 -59772509 + AT_rich Low_complexity Low_complexity 1 29 0 218 291 58 48 chr10 80545258 80545361 -59771404 + MIR3 SINE MIR 91 194 -14 332 247 97 0 chr10 80546491 80546584 -59770181 + MIR SINE MIR 79 180 -82 601 288 40 0 chr10 80548152 80548329 -59768436 - MER91B DNA MER1_type -5 185 2 326 312 48 54 chr10 80548554 80548740 -59768025 + L1M2 LINE L1 1895 2079 -4770 1132 144 44 44 chr10 80548747 80548976 -59767789 + AluJo SINE Alu 84 312 0 215 223 38 84 chr10 80549868 80549964 -59766801 - MIR SINE MIR -58 150 85 232 294 0 15 chr10 80550756 80550824 -59765941 - MIR SINE MIR -73 135 69 240 298 109 22 chr10 80550826 80550945 -59765820 - MIR3 SINE MIR -7 201 73 339 355 96 12 chr10 80551235 80551486 -59765279 - L2 LINE L2 -190 3082 2811 1783 249 42 15 chr10 80551723 80552495 -59764270 + L2 LINE L2 2521 3313 0 185 291 27 73 chr10 80552888 80552998 -59763767 + MIR3 SINE MIR 104 208 0 451 285 112 17 chr10 80553414 80553593 -59763172 + MIR3 SINE MIR 4 199 -9 283 318 171 23 chr10 80554215 80554514 -59762251 + L3 LINE CR1 1207 1549 -28 2292 94 0 7 chr10 80554867 80555175 -59761590 + AluSx SINE Alu 1 306 -6 290 289 30 0 chr10 80555819 80555928 -59760837 + MIR3 SINE MIR 43 159 -49 1358 169 97 18 chr10 80556627 80556905 -59759860 + AluJb SINE Alu 1 300 -12 291 270 45 0 chr10 80557076 80557165 -59759600 - MIR3 SINE MIR -41 167 75 180 291 0 63 chr10 80557223 80557302 -59759463 - MIR SINE MIR -70 192 119 567 209 128 104 chr10 80557617 80557828 -59758937 - MIR SINE MIR -8 254 39 383 317 8 8 chr10 80558021 80558141 -59758624 + MIR3 SINE MIR 78 197 -11 1906 163 0 10 chr10 80558609 80558922 -59757843 - AluSg SINE Alu 0 310 1 285 341 62 16 chr10 80559230 80559359 -59757406 + MIR3 SINE MIR 28 162 -46 255 253 0 0 chr10 80559837 80559916 -59756849 + (TG)n Simple_repeat Simple_repeat 1 79 0 465 337 17 7 chr10 80560082 80560272 -59756493 + MIR3 SINE MIR 13 208 0 343 262 146 41 chr10 80561208 80561393 -59755372 + MIR SINE MIR 8 212 -50 193 229 43 57 chr10 80561478 80561548 -59755217 + L2 LINE L2 3114 3182 -90 382 279 166 22 chr10 80561924 80562153 -59754612 + L3 LINE CR1 1316 1577 0 296 305 42 42 chr10 80562224 80562342 -59754423 - MIR SINE MIR -78 184 67 201 39 0 0 chr10 80564617 80564643 -59752122 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 211 202 0 56 chr10 80565308 80565397 -59751368 + C-rich Low_complexity Low_complexity 5 88 0 25 31 0 0 chr10 80566001 80566033 -59750732 + GC_rich Low_complexity Low_complexity 1 32 0 21 57 0 0 chr10 80566050 80566085 -59750680 + GC_rich Low_complexity Low_complexity 1 35 0 300 206 27 0 chr10 80566365 80566438 -59750327 + (CCCG)n Simple_repeat Simple_repeat 3 77 0 25 31 0 0 chr10 80566632 80566664 -59750101 + GC_rich Low_complexity Low_complexity 1 32 0 291 253 0 33 chr10 80566679 80566770 -59749995 + CT-rich Low_complexity Low_complexity 4 91 0 1351 164 14 47 chr10 80567566 80567841 -59748924 - MER21B LTR ERV1 -597 266 1 339 303 34 105 chr10 80568708 80568975 -59747790 - L1M2 LINE L1 -4947 1594 1229 24 0 0 0 chr10 80569556 80569580 -59747185 + GC_rich Low_complexity Low_complexity 1 24 0 233 264 0 33 chr10 80569604 80569695 -59747070 + CT-rich Low_complexity Low_complexity 4 91 0 24 91 0 0 chr10 80570944 80571010 -59745755 + GC_rich Low_complexity Low_complexity 1 66 0 219 320 26 0 chr10 80571171 80571249 -59745516 - L3 LINE CR1 -76 1501 1422 225 301 115 77 chr10 80572391 80572547 -59744218 - MIR SINE MIR -13 249 88 191 362 0 14 chr10 80572600 80572669 -59744096 + MIR SINE MIR 57 124 -138 292 207 19 116 chr10 80573327 80573389 -59743376 - MIR SINE MIR -64 144 95 1924 171 0 3 chr10 80573389 80573698 -59743067 + AluJb SINE Alu 1 308 -4 292 207 19 116 chr10 80573698 80573758 -59743007 - MIR SINE MIR -113 95 31 335 347 74 11 chr10 80574245 80574421 -59742344 + MIR3 SINE MIR 22 208 0 248 298 43 21 chr10 80574642 80574736 -59742029 - MIR SINE MIR -67 141 46 277 190 35 0 chr10 80574736 80574794 -59741971 + AluSp SINE Alu 134 193 -110 427 286 156 7 chr10 80575291 80575445 -59741320 - MIR SINE MIR -13 249 73 2203 87 27 7 chr10 80575651 80575950 -59740815 - AluY SINE Alu -6 305 1 220 228 13 63 chr10 80576039 80576118 -59740647 - MIR SINE MIR -91 117 43 213 39 0 0 chr10 80576266 80576292 -59740473 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 367 361 84 6 chr10 80577171 80577337 -59739428 - MIR SINE MIR -50 212 34 265 322 195 8 chr10 80577449 80577567 -59739198 - L2 LINE L2 0 3313 3174 277 275 25 12 chr10 80577630 80577710 -59739055 + MIR SINE MIR 31 111 -97 459 334 42 76 chr10 80577842 80578002 -59738763 - L3 LINE CR1 -7 1570 1406 795 157 52 140 chr10 80578002 80578231 -59738534 + MER63A DNA MER1_type 1 209 -1 459 334 42 76 chr10 80578231 80578426 -59738339 - L3 LINE CR1 -171 1406 1227 226 269 0 0 chr10 80578464 80578516 -59738249 + CT-rich Low_complexity Low_complexity 3 54 0 236 254 42 14 chr10 80578516 80578587 -59738178 - L2 LINE L2 -2 3270 3198 567 289 29 1 chr10 80578778 80578954 -59737811 + MIR SINE MIR 3 181 -56 772 268 77 0 chr10 80579082 80579317 -59737448 - MIR SINE MIR 0 262 10 480 265 78 83 chr10 80580298 80580528 -59736237 - MIR SINE MIR -20 242 14 213 355 40 8 chr10 80581510 80581634 -59735131 - MIR SINE MIR -63 145 18 293 306 198 0 chr10 80581665 80581776 -59734989 - MIR SINE MIR -6 256 124 241 271 144 8 chr10 80581839 80581957 -59734808 - MIR SINE MIR -57 151 18 2063 117 13 3 chr10 80582328 80582627 -59734138 - AluSx SINE Alu -10 302 1 1655 181 3 13 chr10 80582691 80582990 -59733775 - AluJo SINE Alu -16 296 1 184 291 182 6 chr10 80583236 80583401 -59733364 + L2 LINE L2 2898 3091 -222 186 246 92 0 chr10 80583925 80583990 -59732775 - L2 LINE L2 -17 3255 3185 296 143 18 0 chr10 80584449 80584505 -59732260 + (CA)n Simple_repeat Simple_repeat 2 58 0 255 356 22 15 chr10 80584864 80584999 -59731766 + MIR SINE MIR 2 137 -125 4117 189 27 18 chr10 80587060 80587839 -59728926 + MER21B LTR ERV1 1 786 -77 291 297 1 0 chr10 80587839 80587926 -59728839 - MIR SINE MIR -62 146 61 2157 82 3 30 chr10 80588215 80588520 -59728245 - AluSg SINE Alu -13 297 1 283 167 20 186 chr10 80589116 80589218 -59727547 + MER81 DNA DNA 2 86 -28 198 274 48 0 chr10 80589347 80589409 -59727356 - MIR SINE MIR -83 125 61 331 272 76 0 chr10 80590347 80590439 -59726326 + MIR SINE MIR 48 146 -116 1664 160 3 52 chr10 80591699 80592024 -59724741 - AluSx SINE Alu -3 309 1 273 326 29 0 chr10 80592698 80592814 -59723951 - MIR SINE MIR -62 146 40 364 220 70 0 chr10 80593254 80593354 -59723411 + MIR SINE MIR 36 142 -66 207 337 11 22 chr10 80593399 80593491 -59723274 + MIR SINE MIR 62 152 -110 255 368 28 0 chr10 80593837 80593981 -59722784 + L2 LINE L2 2917 3064 -208 238 250 16 0 chr10 80594108 80594172 -59722593 - MIR SINE MIR -103 105 41 2889 227 108 14 chr10 80594294 80595445 -59721320 - L1ME1 LINE L1 -6 6229 4975 * 3820 142 83 32 chr10 80595430 80596893 -59719872 - L1MCa LINE L1 -4029 2397 778 1328 192 20 4 chr10 80596890 80597145 -59719620 - L1MCa LINE L1 -6164 262 4 * 1042 226 33 24 chr10 80597143 80597479 -59719286 - L1ME1 LINE L1 -1221 4994 4656 * 1199 280 64 19 chr10 80597468 80597732 -59719033 - L1ME1 LINE L1 -2439 3776 3525 2184 102 0 0 chr10 80597732 80598040 -59718725 - AluSx SINE Alu 0 308 1 1199 280 64 19 chr10 80598040 80598366 -59718399 - L1ME1 LINE L1 -2690 3525 3158 2868 181 40 20 chr10 80598395 80598867 -59717898 - MER68 LTR ERV1 0 562 76 1399 193 66 86 chr10 80598867 80599308 -59717457 - MSTB1 LTR MaLR 0 432 1 2868 181 40 20 chr10 80599308 80599386 -59717379 - MER68 LTR ERV1 -486 76 1 479 224 13 33 chr10 80599390 80599542 -59717223 - L1ME1 LINE L1 -3097 3118 2970 1398 275 149 19 chr10 80599544 80600409 -59716356 - L1ME1 LINE L1 -5265 1131 154 198 71 0 0 chr10 80600428 80600456 -59716309 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 1313 161 12 35 chr10 80600646 80600900 -59715865 + AluJo SINE Alu 1 248 -64 251 291 8 26 chr10 80601038 80601155 -59715610 - MIR SINE MIR -1 261 147 522 241 35 7 chr10 80601172 80601317 -59715448 - MIR SINE MIR -46 216 68 2088 120 0 16 chr10 80601516 80601833 -59714932 + AluSx SINE Alu 1 312 0 577 265 25 56 chr10 80601851 80601996 -59714769 + MLT1F1 LTR MaLR 28 167 -400 1760 157 3 30 chr10 80601996 80602301 -59714464 + AluJb SINE Alu 1 297 -15 577 265 25 56 chr10 80602301 80602351 -59714414 + MLT1F1 LTR MaLR 167 217 -350 829 191 6 0 chr10 80602353 80602526 -59714239 - L1ME1 LINE L1 -198 5968 5795 411 329 182 21 chr10 80602707 80603801 -59712964 - L2 LINE L2 0 3313 2036 2449 167 81 75 chr10 80604097 80604247 -59712518 - MER44D DNA MER2_type -1882 705 557 2072 131 3 0 chr10 80604247 80604552 -59712213 + AluSx SINE Alu 3 308 -4 2449 167 81 75 chr10 80604552 80604766 -59711999 - MER44D DNA MER2_type -2030 557 346 1243 144 45 27 chr10 80604766 80604886 -59711879 + MER30 DNA MER1_type 3 130 -100 2385 87 3 0 chr10 80604886 80605198 -59711567 - AluSp SINE Alu 0 313 1 1243 144 45 27 chr10 80605198 80605299 -59711466 + MER30 DNA MER1_type 130 228 -2 2449 167 81 75 chr10 80605299 80605587 -59711178 - MER44D DNA MER2_type -2241 346 48 598 255 141 69 chr10 80605677 80605883 -59710882 - MLT1G1 LTR MaLR -163 404 214 1517 170 10 43 chr10 80605883 80606183 -59710582 + AluJo SINE Alu 11 300 -12 598 255 141 69 chr10 80606183 80606351 -59710414 - MLT1G1 LTR MaLR -353 214 1 292 311 33 0 chr10 80606624 80606714 -59710051 - MIR SINE MIR -61 201 109 21 0 0 0 chr10 80607045 80607066 -59709699 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 109 16 chr10 80607352 80607416 -59709349 + CT-rich Low_complexity Low_complexity 6 75 0 263 243 43 0 chr10 80607530 80607600 -59709165 - MIR SINE MIR -113 149 77 1932 204 47 49 chr10 80608002 80608508 -59708257 - MLT1D LTR MaLR 0 505 1 394 265 7 22 chr10 80608592 80608728 -59708037 + GA-rich Low_complexity Low_complexity 2 135 0 1872 122 3 55 chr10 80608728 80609055 -59707710 + AluJo SINE Alu 1 310 -2 216 365 54 24 chr10 80609123 80609290 -59707475 + MIR3 SINE MIR 30 201 -7 198 350 42 35 chr10 80609737 80609880 -59706885 + MIR SINE MIR 102 245 -17 387 0 0 0 chr10 80611121 80611164 -59705601 + (TTGG)n Simple_repeat Simple_repeat 4 46 0 227 387 45 0 chr10 80611170 80611281 -59705484 + MIR SINE MIR 30 145 -63 217 247 24 12 chr10 80611827 80611912 -59704853 + (TG)n Simple_repeat Simple_repeat 2 87 0 270 0 0 0 chr10 80611981 80612011 -59704754 + (TG)n Simple_repeat Simple_repeat 2 31 0 311 182 25 19 chr10 80612063 80612222 -59704543 + (TG)n Simple_repeat Simple_repeat 1 160 0 268 273 28 28 chr10 80612303 80612479 -59704286 + (TG)n Simple_repeat Simple_repeat 1 176 0 202 217 0 0 chr10 80612830 80612876 -59703889 + (TG)n Simple_repeat Simple_repeat 1 46 0 237 331 169 11 chr10 80613469 80613653 -59703112 - L2 LINE L2 -2 3270 3058 315 192 39 58 chr10 80614144 80614248 -59702517 + MIR SINE MIR 45 146 -62 187 311 238 0 chr10 80614618 80614740 -59702025 + MIR3 SINE MIR 41 191 -17 1355 229 45 40 chr10 80615471 80615898 -59700867 - Charlie1b DNA MER1_type 0 523 95 2152 128 0 0 chr10 80616920 80617226 -59699539 - AluSx SINE Alu -6 306 1 299 304 27 36 chr10 80617228 80617340 -59699425 + MIR SINE MIR 116 226 -36 228 233 111 22 chr10 80617344 80617434 -59699331 + L2 LINE L2 3201 3298 -15 326 289 29 0 chr10 80617501 80617605 -59699160 - MIR3 SINE MIR -48 160 54 669 140 0 37 chr10 80617740 80617847 -59698918 + AluJb SINE Alu 195 297 -15 855 207 11 2 chr10 80617863 80618072 -59698693 - L1ME1 LINE L1 -186 5980 5795 381 326 183 22 chr10 80618253 80619348 -59697417 - L2 LINE L2 0 3313 2036 907 136 7 0 chr10 80619644 80619791 -59696974 - Tigger7 DNA MER2_type 0 2487 2340 1666 162 7 42 chr10 80619794 80620103 -59696662 + AluJo SINE Alu 3 300 -12 618 253 32 6 chr10 80620113 80620271 -59696494 - MLT1H1 LTR MaLR -393 162 1 292 311 33 0 chr10 80620544 80620634 -59696131 - MIR SINE MIR -61 201 109 21 0 0 0 chr10 80620965 80620986 -59695779 + AT_rich Low_complexity Low_complexity 1 21 0 255 31 109 16 chr10 80621272 80621336 -59695429 + CT-rich Low_complexity Low_complexity 6 75 0 263 243 43 0 chr10 80621450 80621520 -59695245 - MIR SINE MIR -113 149 77 1932 204 47 49 chr10 80621922 80622428 -59694337 - MLT1D LTR MaLR 0 505 1 394 265 7 22 chr10 80622512 80622648 -59694117 + GA-rich Low_complexity Low_complexity 2 135 0 1887 122 3 52 chr10 80622648 80622975 -59693790 + AluJo SINE Alu 1 311 -1 216 365 54 24 chr10 80623043 80623210 -59693555 + MIR3 SINE MIR 30 201 -7 198 350 42 35 chr10 80623657 80623800 -59692965 + MIR SINE MIR 102 245 -17 387 0 0 0 chr10 80625041 80625084 -59691681 + (TTGG)n Simple_repeat Simple_repeat 4 46 0 227 387 45 0 chr10 80625090 80625201 -59691564 + MIR SINE MIR 30 145 -63 226 308 14 7 chr10 80625685 80625831 -59690934 + (TG)n Simple_repeat Simple_repeat 2 148 0 270 0 0 0 chr10 80625900 80625930 -59690835 + (TG)n Simple_repeat Simple_repeat 2 31 0 311 182 25 19 chr10 80625982 80626141 -59690624 + (TG)n Simple_repeat Simple_repeat 1 160 0 268 273 28 28 chr10 80626222 80626398 -59690367 + (TG)n Simple_repeat Simple_repeat 1 176 0 202 217 0 0 chr10 80626749 80626795 -59689970 + (TG)n Simple_repeat Simple_repeat 1 46 0 237 331 169 11 chr10 80627388 80627572 -59689193 - L2 LINE L2 -2 3270 3058 315 192 39 58 chr10 80628063 80628167 -59688598 + MIR SINE MIR 45 146 -62 187 311 238 0 chr10 80628537 80628659 -59688106 + MIR3 SINE MIR 41 191 -17 1345 232 45 40 chr10 80629385 80629812 -59686953 - Charlie1b DNA MER1_type 0 523 95 2152 128 0 0 chr10 80630834 80631140 -59685625 - AluSx SINE Alu -6 306 1 299 304 27 36 chr10 80631142 80631254 -59685511 + MIR SINE MIR 116 226 -36 228 233 111 22 chr10 80631258 80631348 -59685417 + L2 LINE L2 3201 3298 -15 368 301 10 0 chr10 80631415 80631528 -59685237 - MIR3 SINE MIR -48 160 46 214 184 0 0 chr10 80631622 80631660 -59685105 + (TG)n Simple_repeat Simple_repeat 1 38 0 658 236 97 0 chr10 80632066 80632231 -59684534 + MER5A DNA MER1_type 9 189 0 264 137 0 0 chr10 80632336 80632387 -59684378 + (TCCA)n Simple_repeat Simple_repeat 2 52 0 276 338 179 30 chr10 80632637 80632838 -59683927 - MIR SINE MIR -12 250 20 279 319 97 53 chr10 80632864 80633090 -59683675 + L3 LINE CR1 1314 1549 -28 199 413 40 0 chr10 80633430 80633556 -59683209 - MIR SINE MIR -54 208 78 316 98 0 0 chr10 80633817 80633858 -59682907 + Alu SINE Alu 1 41 -262 1038 207 118 55 chr10 80633859 80634255 -59682510 + MLT1G LTR MaLR 111 555 0 927 121 8 0 chr10 80634507 80634639 -59682126 + FLAM_C SINE Alu 1 133 -10 1814 104 90 0 chr10 80634643 80634946 -59681819 + AluSp SINE Alu 1 327 0 408 193 128 28 chr10 80634952 80635061 -59681704 + MIR SINE MIR 64 183 -79 343 297 10 0 chr10 80635420 80635521 -59681244 + MIR3 SINE MIR 86 187 -21 367 342 42 42 chr10 80635918 80636178 -59680587 + L2 LINE L2 2985 3244 -28 277 265 37 22 chr10 80637391 80637500 -59679265 - MIR SINE MIR -63 145 68 215 263 12 30 chr10 80638056 80638173 -59678592 + MIR SINE MIR 78 188 -61 236 374 65 0 chr10 80638443 80638566 -59678199 - L2 LINE L2 -9 3263 3133 * 521 293 35 20 chr10 80638535 80638733 -59678032 + MIR SINE MIR 21 221 -41 2179 103 7 3 chr10 80639541 80639841 -59676924 - AluSq SINE Alu -9 304 4 477 275 7 40 chr10 80639934 80640083 -59676682 + LTR33 LTR ERVL 1 144 -377 1451 216 202 28 chr10 80640087 80640592 -59676173 - MLT1G1 LTR MaLR -2 593 1 632 305 30 4 chr10 80640662 80640895 -59675870 + LTR33 LTR ERVL 229 467 -54 213 267 53 0 chr10 80641323 80641398 -59675367 - MIR SINE MIR -57 151 73 195 100 0 0 chr10 80641494 80641524 -59675241 + (ATG)n Simple_repeat Simple_repeat 3 32 0 228 169 185 31 chr10 80641530 80641595 -59675170 - MIR SINE MIR -9 253 179 409 240 104 0 chr10 80641604 80641729 -59675036 + MER96 DNA MER1_type? 37 174 -1 239 265 167 10 chr10 80641730 80641832 -59674933 - MIR SINE MIR -81 181 64 221 0 35 0 chr10 80641834 80641863 -59674902 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2121 92 0 0 chr10 80641866 80642139 -59674626 - AluSq SINE Alu -35 278 6 770 278 26 17 chr10 80643146 80643376 -59673389 + MIR SINE MIR 13 244 -18 262 256 49 12 chr10 80643540 80643622 -59673143 - MIR3 SINE MIR -15 193 109 195 303 79 0 chr10 80643865 80643954 -59672811 - MIR SINE MIR -114 148 53 252 324 76 9 chr10 80644043 80644148 -59672617 + MIR SINE MIR 42 153 -109 239 192 77 0 chr10 80644727 80644779 -59671986 + MER103 DNA DNA 6 61 -105 21 36 0 0 chr10 80644787 80644815 -59671950 + AT_rich Low_complexity Low_complexity 1 28 0 219 300 55 36 chr10 80645726 80645836 -59670929 + MIR SINE MIR 21 132 -76 834 235 25 0 chr10 80647315 80647515 -59669250 + MIR SINE MIR 9 213 -49 483 252 7 46 chr10 80647700 80647851 -59668914 + MIR SINE MIR 104 248 -14 249 220 17 0 chr10 80647860 80647919 -59668846 - MIR SINE MIR -56 152 93 2358 90 0 0 chr10 80648793 80649103 -59667662 - AluSx SINE Alu -2 310 1 281 57 0 0 chr10 80649199 80649234 -59667531 + MLT1F1 LTR MaLR 70 104 -463 670 241 55 63 chr10 80649315 80649552 -59667213 - MIR SINE MIR -21 241 7 1729 143 24 3 chr10 80649791 80650101 -59666664 - AluJo SINE Alu 0 335 20 243 271 93 28 chr10 80650640 80650747 -59666018 - L2 LINE L2 -214 3058 2945 344 288 14 55 chr10 80651473 80651619 -59665146 + MIR SINE MIR 68 207 -55 230 281 10 73 chr10 80652288 80652384 -59664381 + L2 LINE L2 3167 3256 -16 204 200 0 0 chr10 80652941 80652986 -59663779 + (TG)n Simple_repeat Simple_repeat 1 45 0 200 264 97 0 chr10 80653023 80653095 -59663670 + L3 LINE CR1 1374 1452 -125 287 244 0 2 chr10 80654141 80654211 -59662554 + MIR SINE MIR 73 142 -66 413 262 74 25 chr10 80656193 80656394 -59660371 + MIR SINE MIR 2 211 -36 906 129 0 7 chr10 80656900 80657040 -59659725 - AluJo SINE Alu -9 303 165 793 177 85 0 chr10 80657152 80657176 -59659589 - AluJo SINE Alu -155 157 136 248 0 31 0 chr10 80657176 80657208 -59659557 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 793 177 85 0 chr10 80657208 80657324 -59659441 - AluJo SINE Alu -176 136 5 438 244 67 122 chr10 80657500 80657770 -59658995 + MER112 DNA MER1_type 6 260 0 411 220 291 0 chr10 80658717 80658858 -59657907 - MER5A DNA MER1_type 0 189 8 212 258 31 86 chr10 80658861 80658989 -59657776 + MER5B DNA MER1_type 2 122 -56 307 300 47 42 chr10 80659059 80659249 -59657516 + L3 LINE CR1 1371 1561 -16 261 214 18 0 chr10 80659453 80659509 -59657256 - MIR SINE MIR -62 146 90 1368 252 88 11 chr10 80659878 80660311 -59656454 - L1ME1 LINE L1 -4 6162 5697 917 122 0 0 chr10 80660312 80660443 -59656322 + FLAM_C SINE Alu 7 137 -6 3677 210 41 27 chr10 80660445 80661117 -59655648 - L1ME1 LINE L1 -461 5705 5044 1963 122 0 20 chr10 80661117 80661420 -59655345 - AluSx SINE Alu -15 297 1 3677 210 41 27 chr10 80661420 80662101 -59654664 - L1ME1 LINE L1 -1122 5044 4329 1940 119 61 0 chr10 80662101 80662395 -59654370 + AluJb SINE Alu 1 312 0 3677 210 41 27 chr10 80662395 80662444 -59654321 - L1ME1 LINE L1 -1837 4329 4282 1187 256 184 35 chr10 80662450 80662911 -59653854 + MLT1G1 LTR MaLR 66 595 0 441 311 65 42 chr10 80663347 80663653 -59653112 + L2 LINE L2 2958 3270 -43 728 234 80 5 chr10 80663704 80663892 -59652873 - MIR SINE MIR -39 223 22 206 242 65 0 chr10 80664107 80664169 -59652596 - MIR SINE MIR -79 183 118 333 295 160 2 chr10 80664330 80664448 -59652317 - MIR SINE MIR -62 146 30 941 123 105 12 chr10 80665279 80665450 -59651315 - L1MB8 LINE L1 0 6178 5992 468 222 10 0 chr10 80665597 80665696 -59651069 + MER5A DNA MER1_type 10 109 -80 267 333 19 0 chr10 80665756 80665861 -59650904 - L1MC4 LINE L1 -159 7883 7777 258 359 27 33 chr10 80666894 80667078 -59649687 + MIR SINE MIR 14 196 -66 2164 105 0 0 chr10 80667122 80667416 -59649349 - AluSx SINE Alu -14 298 5 200 245 38 0 chr10 80667753 80667806 -59648959 + L2 LINE L2 3164 3218 -95 194 396 65 0 chr10 80668251 80668390 -59648375 - L2 LINE L2 -228 3044 2897 497 263 31 31 chr10 80668508 80668668 -59648097 - L2 LINE L2 -4 3309 3150 1913 276 65 8 chr10 80668829 80669354 -59647411 + MLT1H1 LTR MaLR 1 555 0 831 188 74 6 chr10 80669466 80669642 -59647123 + MER53 DNA DNA 1 188 -1 193 260 78 52 chr10 80670790 80670867 -59645898 - L2 LINE L2 -31 3282 3204 238 327 49 56 chr10 80670944 80671106 -59645659 + MIR SINE MIR 32 192 -70 200 295 15 123 chr10 80671227 80671488 -59645277 - L2 LINE L2 -189 3083 2851 279 353 43 0 chr10 80672358 80672474 -59644291 - MIR3 SINE MIR -77 131 11 2130 115 0 0 chr10 80672722 80673017 -59643748 - AluSx SINE Alu -17 295 1 2125 58 69 4 chr10 80673248 80673525 -59643240 - AluSq SINE Alu -12 301 7 378 314 29 0 chr10 80673595 80673732 -59643033 - L2 LINE L2 -213 3059 2919 675 345 105 21 chr10 80673867 80674611 -59642154 - L2 LINE L2 -571 2743 1938 962 128 0 0 chr10 80675615 80675748 -59641017 + FLAM_C SINE Alu 1 133 0 362 232 92 137 chr10 80676173 80676457 -59640308 - L2 LINE L2 0 3313 3043 230 336 35 26 chr10 80676647 80676763 -59640002 - MIR SINE MIR -6 256 140 853 241 53 4 chr10 80676924 80677152 -59639613 + MIR SINE MIR 3 241 -21 208 93 70 0 chr10 80677615 80677658 -59639107 + GA-rich Low_complexity Low_complexity 1 46 0 252 59 0 0 chr10 80678100 80678134 -59638631 + (CCGGG)n Simple_repeat Simple_repeat 2 35 0 28 48 0 0 chr10 80678204 80678246 -59638519 + GC_rich Low_complexity Low_complexity 1 42 0 464 308 14 46 chr10 80680871 80681129 -59635636 + MIR SINE MIR 3 248 -14 1047 160 70 30 chr10 80681464 80681664 -59635101 - AluJo SINE Alu -18 294 87 895 316 68 50 chr10 80681665 80681900 -59634865 + Charlie8 DNA MER1_type 31 260 -2157 1055 172 16 31 chr10 80681900 80682092 -59634673 - MER5A DNA MER1_type 0 189 1 895 316 68 50 chr10 80682092 80682249 -59634516 + Charlie8 DNA MER1_type 260 436 -1981 2242 104 0 3 chr10 80682249 80682557 -59634208 - AluSx SINE Alu -5 307 1 895 316 68 50 chr10 80682557 80682648 -59634117 + Charlie8 DNA MER1_type 436 524 -1893 401 319 92 15 chr10 80682800 80683060 -59633705 - L2 LINE L2 0 3313 3034 432 276 82 0 chr10 80683584 80683718 -59633047 - MER117 DNA MER1_type -39 158 14 256 218 103 69 chr10 80684651 80684738 -59632027 + MIR SINE MIR 101 190 -72 293 343 49 14 chr10 80685445 80685588 -59631177 + MIR SINE MIR 51 198 -64 561 365 21 48 chr10 80685611 80685943 -59630822 + L2 LINE L2 2948 3270 -2 243 269 92 67 chr10 80686547 80686666 -59630099 + MIR SINE MIR 101 222 -40 371 205 39 3 chr10 80687301 80687409 -59629356 - MIR SINE MIR -54 154 39 223 329 35 0 chr10 80688051 80688136 -59628629 - MIR3 SINE MIR -22 186 99 835 227 122 13 chr10 80688631 80688860 -59627905 + MIR SINE MIR 9 262 0 192 379 63 0 chr10 80689518 80689613 -59627152 + MIR3 SINE MIR 81 181 -27 407 293 43 49 chr10 80690108 80690272 -59626493 - MIR SINE MIR -74 188 26 373 326 186 15 chr10 80691019 80691701 -59625064 + L2 LINE L2 2500 3313 0 247 282 68 10 chr10 80691961 80692064 -59624701 + MIR SINE MIR 37 145 -117 1135 268 76 16 chr10 80692680 80693061 -59623704 + MLT1I LTR MaLR 2 405 -4 434 165 0 18 chr10 80694499 80694608 -59622157 + (TCCA)n Simple_repeat Simple_repeat 2 108 0 314 320 41 16 chr10 80694608 80694730 -59622035 - L2 LINE L2 0 3272 3148 188 369 86 7 chr10 80694901 80695180 -59621585 - L2 LINE L2 -337 2977 2677 * 550 287 45 10 chr10 80695167 80695369 -59621396 + MIR SINE MIR 36 244 -18 245 363 111 0 chr10 80695405 80695540 -59621225 + MIR SINE MIR 34 183 -79 270 250 36 48 chr10 80696076 80696160 -59620605 + MIR SINE MIR 110 192 -70 191 236 9 55 chr10 80696697 80696778 -59619987 - MIR3 SINE MIR -29 179 103 335 213 64 11 chr10 80698198 80698291 -59618474 + MLT1J2 LTR MaLR 69 166 -284 314 214 58 48 chr10 80698291 80698394 -59618371 + MER69A DNA AcHobo 1 104 -73 316 206 10 108 chr10 80698425 80698473 -59618292 + MER69A DNA AcHobo 86 120 -2406 2440 63 0 0 chr10 80698473 80698772 -59617993 + AluY SINE Alu 1 299 -12 316 206 10 108 chr10 80698772 80698825 -59617940 + MER69A DNA AcHobo 120 177 0 1799 171 0 13 chr10 80699758 80700068 -59616697 - AluSx SINE Alu -6 306 1 855 277 102 40 chr10 80700799 80701229 -59615536 - LTR16A1 LTR ERVL 0 457 1 238 221 173 10 chr10 80701937 80702041 -59614724 - MIR3 SINE MIR -26 182 62 583 125 98 0 chr10 80703283 80703395 -59613370 + MLT1D LTR MaLR 85 207 -298 1080 217 13 8 chr10 80703542 80703777 -59612988 + MLT1D LTR MaLR 262 497 -8 294 225 0 14 chr10 80704245 80704316 -59612449 + MIR3 SINE MIR 104 173 -35 261 0 0 0 chr10 80705088 80705117 -59611648 + (CAA)n Simple_repeat Simple_repeat 2 30 0 268 280 50 30 chr10 80705772 80705872 -59610893 + L2 LINE L2 3154 3255 -17 426 219 11 17 chr10 80705931 80706109 -59610656 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 226 354 42 0 chr10 80706712 80706808 -59609957 - L2 LINE L2 -13 3259 3160 412 333 139 7 chr10 80706893 80707166 -59609599 - L2 LINE L2 0 3313 3005 633 355 112 17 chr10 80707281 80707816 -59608949 - L2 LINE L2 -500 2814 2229 272 247 162 0 chr10 80707937 80708060 -59608705 - MIR SINE MIR -63 145 19 186 211 141 28 chr10 80708071 80708142 -59608623 + MIR SINE MIR 62 140 -68 336 269 78 21 chr10 80708426 80708567 -59608198 - MIR SINE MIR -100 162 14 200 250 0 0 chr10 80709053 80709097 -59607668 - L2 LINE L2 -2 3311 3268 547 184 55 0 chr10 80709334 80709443 -59607322 - L1MB5 LINE L1 -1 6173 6059 422 275 124 11 chr10 80709549 80709727 -59607038 - MIR SINE MIR -55 207 10 195 287 115 23 chr10 80710459 80710546 -59606219 + MIR SINE MIR 102 196 -66 215 229 0 21 chr10 80710562 80710610 -59606155 + CT-rich Low_complexity Low_complexity 5 51 0 193 301 36 0 chr10 80712233 80712316 -59604449 - MIR SINE MIR -63 145 60 180 244 0 22 chr10 80712560 80712605 -59604160 - MIR SINE MIR -133 75 32 230 305 12 12 chr10 80712898 80712980 -59603785 - L3 LINE CR1 -96 1481 1400 270 263 10 61 chr10 80713249 80713348 -59603417 + MIR SINE MIR 54 147 -61 181 330 98 9 chr10 80714126 80714238 -59602527 + L2 LINE L2 2929 3050 -222 803 155 7 0 chr10 80714390 80714545 -59602220 + (TGGA)n Simple_repeat Simple_repeat 4 159 0 297 269 128 32 chr10 80715200 80715356 -59601409 + MIR SINE MIR 25 195 -13 643 260 20 0 chr10 80715776 80715926 -59600839 + MER5B DNA MER1_type 4 156 -22 203 312 27 15 chr10 80716058 80716203 -59600562 - MIR SINE MIR -63 145 9 466 249 53 69 chr10 80716777 80716966 -59599799 + MIR SINE MIR 6 191 -71 555 302 21 37 chr10 80716972 80717161 -59599604 + MIR SINE MIR 75 260 -2 193 350 12 0 chr10 80718820 80718900 -59597865 - L2 LINE L2 -986 2328 2248 224 189 14 0 chr10 80719417 80719491 -59597274 + CT-rich Low_complexity Low_complexity 2 76 0 463 325 32 6 chr10 80720005 80720162 -59596603 + L3 LINE CR1 1414 1574 -3 212 332 81 19 chr10 80721229 80721440 -59595325 - L2 LINE L2 -176 3096 2873 388 207 100 0 chr10 80721891 80722017 -59594748 - L1MD3 LINE L1 0 7982 6103 323 349 58 25 chr10 80725068 80725430 -59591335 - L2 LINE L2 -214 3058 2686 418 244 17 34 chr10 80726182 80726301 -59590464 - MIR3 SINE MIR -13 195 79 271 372 75 27 chr10 80727111 80727299 -59589466 - MIR SINE MIR -10 252 56 1297 171 33 0 chr10 80727508 80727718 -59589047 + MER20 DNA MER1_type 3 219 0 195 281 16 0 chr10 80727924 80727988 -59588777 + L2 LINE L2 3182 3246 -67 378 311 38 13 chr10 80728807 80728959 -59587806 + MIR SINE MIR 30 183 -50 1798 164 0 20 chr10 80729714 80730019 -59586746 - AluJo SINE Alu -13 299 1 204 359 51 6 chr10 80730054 80730210 -59586555 - MIR3 SINE MIR -24 184 22 268 363 65 6 chr10 80730361 80730529 -59586236 - MIR SINE MIR -12 250 73 209 200 40 20 chr10 80730569 80730619 -59586146 - L2 LINE L2 -90 3223 3173 235 369 71 15 chr10 80730658 80730788 -59585977 - L2 LINE L2 -4 3309 3188 2134 93 0 0 chr10 80730788 80731113 -59585652 + AluSg1 SINE Alu 1 325 0 347 218 13 0 chr10 80731120 80731198 -59585567 + MER116 DNA Mariner 2 80 0 235 369 71 15 chr10 80731198 80731256 -59585509 - L2 LINE L2 -130 3183 3101 223 363 12 0 chr10 80731666 80731746 -59585019 + L2 LINE L2 3187 3267 -5 207 302 18 6 chr10 80731910 80732079 -59584686 + (CCCTG)n Simple_repeat Simple_repeat 4 174 0 411 355 101 13 chr10 80732330 80732558 -59584207 + MIR SINE MIR 13 260 -2 189 0 0 0 chr10 80733193 80733214 -59583551 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 1377 289 67 58 chr10 80733336 80734277 -59582488 + L1MC4a LINE L1 5221 5396 -750 411 271 123 6 chr10 80734662 80734832 -59581933 - MIR SINE MIR -55 207 18 298 312 64 50 chr10 80735301 80735448 -59581317 - MIR SINE MIR -61 147 14 264 30 0 0 chr10 80735935 80735968 -59580797 + (GAATG)n Simple_repeat Simple_repeat 3 35 0 309 352 40 8 chr10 80736015 80736140 -59580625 + MIR SINE MIR 33 161 -101 215 277 31 31 chr10 80736494 80736559 -59580206 + MIR SINE MIR 85 149 -59 346 289 33 16 chr10 80736583 80736704 -59580061 - MER117 DNA MER1_type -40 157 35 393 304 45 0 chr10 80737149 80737261 -59579504 - MIR3 SINE MIR -43 165 49 903 265 67 0 chr10 80737594 80737817 -59578948 + MIR SINE MIR 9 246 -16 629 246 40 6 chr10 80739087 80739262 -59577503 + MER5A DNA MER1_type 5 185 -4 190 331 16 33 chr10 80739524 80739645 -59577120 - L2 LINE L2 -161 3111 2993 184 219 58 102 chr10 80740446 80740583 -59576182 + L2 LINE L2 2773 2903 -411 246 341 95 8 chr10 80740699 80740825 -59575940 - L2 LINE L2 0 3272 3136 233 183 25 0 chr10 80741566 80741628 -59575137 - MIR SINE MIR -62 146 83 228 297 14 97 chr10 80741658 80741803 -59574962 - MIR3 SINE MIR -63 145 13 279 274 99 70 chr10 80741981 80742213 -59574552 - MIR SINE MIR -19 243 2 449 274 74 11 chr10 80742401 80742576 -59574189 + MIR3 SINE MIR 1 186 -22 231 244 118 108 chr10 80743058 80743278 -59573487 - MIR SINE MIR -15 247 18 635 328 16 0 chr10 80743544 80743736 -59573029 + MIR SINE MIR 52 246 -16 481 157 10 10 chr10 80744745 80744847 -59571918 + GA-rich Low_complexity Low_complexity 2 103 0 334 314 91 39 chr10 80744870 80745277 -59571488 - L2 LINE L2 -433 2881 2454 270 250 36 48 chr10 80745264 80745348 -59571417 - L3 LINE CR1 -69 1508 1426 * 303 249 21 77 chr10 80746493 80746651 -59570114 + MIR SINE MIR 69 209 -53 311 94 0 19 chr10 80746871 80746924 -59569841 + (CA)n Simple_repeat Simple_repeat 2 53 0 284 189 0 11 chr10 80747021 80747111 -59569654 + GA-rich Low_complexity Low_complexity 2 90 0 211 309 13 39 chr10 80747123 80747298 -59569467 + GA-rich Low_complexity Low_complexity 1 179 -343 2172 127 3 3 chr10 80747298 80747605 -59569160 + AluSx SINE Alu 1 307 -5 211 309 13 39 chr10 80747605 80747659 -59569106 + GA-rich Low_complexity Low_complexity 179 522 0 198 265 82 71 chr10 80748762 80748860 -59567905 - MIR SINE MIR -141 121 23 300 230 27 0 chr10 80749049 80749123 -59567642 + L2 LINE L2 3238 3313 0 236 274 153 42 chr10 80749714 80749929 -59566836 - L2 LINE L2 -229 3043 2805 285 230 0 0 chr10 80750210 80750284 -59566481 + (ATG)n Simple_repeat Simple_repeat 2 75 0 195 139 0 0 chr10 80750462 80750498 -59566267 + (ATGGTG)n Simple_repeat Simple_repeat 6 41 0 260 305 120 30 chr10 80750570 80750803 -59565962 - L2 LINE L2 -816 2498 2245 184 133 89 22 chr10 80751094 80751139 -59565626 - MIR SINE MIR -70 138 91 205 161 0 0 chr10 80751778 80751809 -59564956 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 341 244 56 44 chr10 80751998 80752158 -59564607 - L1MC4a LINE L1 -1803 6005 5844 213 195 0 0 chr10 80752574 80752615 -59564150 - MIR SINE MIR -87 121 81 263 324 58 36 chr10 80753474 80753613 -59563152 + MIR SINE MIR 84 225 -37 2831 91 0 21 chr10 80753639 80754022 -59562743 - THE1C LTR MaLR 0 375 1 368 248 76 71 chr10 80754211 80754409 -59562356 + MIR SINE MIR 34 232 -30 316 307 16 0 chr10 80754864 80754991 -59561774 - MER103 DNA DNA -19 147 19 559 252 155 0 chr10 80755138 80755293 -59561472 - MER5A DNA MER1_type 0 189 11 30 0 0 0 chr10 80755639 80755669 -59561096 + AT_rich Low_complexity Low_complexity 1 30 0 186 103 0 0 chr10 80755946 80755975 -59560790 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 271 268 73 24 chr10 80756095 80756218 -59560547 + MIR3 SINE MIR 65 193 -15 320 152 15 0 chr10 80756369 80756435 -59560330 + CT-rich Low_complexity Low_complexity 1 67 0 664 161 181 0 chr10 80756462 80756611 -59560154 - MER3 DNA MER1_type -80 129 1 265 338 93 44 chr10 80757128 80757471 -59559294 + L2 LINE L2 2817 3176 -96 295 292 247 7 chr10 80757766 80757920 -59558845 + MIR SINE MIR 53 243 -19 244 219 42 104 chr10 80758532 80758628 -59558137 + MIR SINE MIR 98 187 -75 192 77 0 0 chr10 80759003 80759029 -59557736 + (T)n Simple_repeat Simple_repeat 1 26 0 199 250 62 0 chr10 80759402 80759466 -59557299 - MIR SINE MIR -86 122 55 999 181 17 0 chr10 80759890 80760067 -59556698 + MER5A DNA MER1_type 6 185 -4 823 147 0 33 chr10 80760411 80760595 -59556170 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 282 323 0 0 chr10 80760595 80760688 -59556077 - L2 LINE L2 0 3272 3180 229 278 24 95 chr10 80761017 80761143 -59555622 - MIR SINE MIR -76 132 16 211 257 100 14 chr10 80762546 80762616 -59554149 - L2 LINE L2 -47 3225 3150 2052 154 3 6 chr10 80763093 80763405 -59553360 + AluSx SINE Alu 1 311 -1 245 308 27 22 chr10 80763519 80763704 -59553061 + L1MC/D LINE L1 5148 5333 -813 235 266 105 16 chr10 80763752 80763876 -59552889 + L1MC/D LINE L1 5404 5538 -2270 358 211 53 21 chr10 80764238 80764333 -59552432 - HAL1b LINE L1 -7 1341 1244 2120 246 58 70 chr10 80764402 80764884 -59551881 - HAL1b LINE L1 -232 1116 630 1213 298 64 16 chr10 80764884 80765371 -59551394 - MLT1J LTR MaLR 0 511 2 2120 246 58 70 chr10 80765371 80765944 -59550821 - HAL1b LINE L1 -718 630 74 272 318 9 28 chr10 80765971 80766078 -59550687 - MER91C DNA MER1_type 0 140 36 484 277 13 0 chr10 80766251 80766267 -59550498 - L1MA10 LINE L1 -1 6333 6318 2489 216 28 39 chr10 80766267 80766643 -59550122 - L1ME1 LINE L1 -9 6224 5845 2128 116 17 7 chr10 80766643 80766936 -59549829 - AluSp SINE Alu -17 296 1 2489 216 28 39 chr10 80766936 80767438 -59549327 - L1ME1 LINE L1 -388 5845 5379 2287 248 44 17 chr10 80767405 80768227 -59548538 - L1ME1 LINE L1 -1630 4585 3742 * 2283 230 66 6 chr10 80768277 80769104 -59547661 - L1ME1 LINE L1 -3222 2993 2156 * 3858 234 40 49 chr10 80769092 80770522 -59546243 - L1MD2 LINE L1 0 6428 4986 225 0 0 0 chr10 80770522 80770547 -59546218 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3858 234 40 49 chr10 80770547 80770646 -59546119 - L1MD2 LINE L1 -1442 4986 4888 2361 113 0 0 chr10 80770646 80770948 -59545817 + AluSg SINE Alu 1 302 -8 3858 234 40 49 chr10 80770948 80771144 -59545621 - L1MD2 LINE L1 -1540 4888 4722 2678 279 61 27 chr10 80771249 80772598 -59544167 - L1MD2 LINE L1 -4483 1913 519 897 239 14 19 chr10 80772592 80772801 -59543964 - L1MD2 LINE L1 -6152 244 37 * 2122 110 27 3 chr10 80773071 80773363 -59543402 + AluSq SINE Alu 1 299 -14 2385 91 0 10 chr10 80773571 80773880 -59542885 + AluSg SINE Alu 1 306 -4 420 238 0 87 chr10 80773892 80774018 -59542747 + L2 LINE L2 3199 3313 0 318 115 0 0 chr10 80776557 80776609 -59540156 + (CCCTAA)n Simple_repeat Simple_repeat 4 55 0 360 273 68 74 chr10 80776677 80776988 -59539777 + MLT1K LTR MaLR 278 586 -2 299 310 12 23 chr10 80777095 80777266 -59539499 + L1MC4a LINE L1 5723 5891 -1917 2065 162 39 30 chr10 80777285 80777833 -59538932 - MLT2A2 LTR ERVL 0 554 1 2780 231 66 23 chr10 80777833 80778692 -59538073 + L1MD2 LINE L1 5448 6343 -16 281 253 44 0 chr10 80778679 80778770 -59537995 + L1MC4a LINE L1 5870 5964 -1844 * 712 287 27 34 chr10 80778973 80779183 -59537582 + MIR SINE MIR 10 215 -47 322 292 42 83 chr10 80779227 80779280 -59537485 - MIR SINE MIR -116 146 92 2356 101 7 0 chr10 80779280 80779587 -59537178 + AluY SINE Alu 1 309 -2 322 292 42 83 chr10 80779587 80779677 -59537088 - MIR SINE MIR -170 92 9 21 36 0 0 chr10 80779978 80780006 -59536759 + AT_rich Low_complexity Low_complexity 1 28 0 181 357 10 61 chr10 80780256 80780354 -59536411 + MIR SINE MIR 52 144 -64 207 319 0 0 chr10 80780548 80780620 -59536145 - L2 LINE L2 -1 3271 3200 23 0 0 0 chr10 80780898 80780921 -59535844 + AT_rich Low_complexity Low_complexity 1 23 0 183 80 0 0 chr10 80782306 80782331 -59534434 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 207 137 20 59 chr10 80782481 80782532 -59534233 - L2 LINE L2 -217 3055 3007 192 340 68 58 chr10 80782607 80782710 -59534055 + L2 LINE L2 3169 3272 0 1025 160 0 0 chr10 80783056 80783212 -59533553 + FRAM SINE Alu 12 167 -9 293 344 8 16 chr10 80783310 80783432 -59533333 + MIR SINE MIR 17 137 -71 309 347 89 45 chr10 80784321 80784635 -59532130 + L3 LINE CR1 430 757 -820 372 315 51 106 chr10 80785541 80785833 -59530932 - L2 LINE L2 -35 3237 2962 224 328 55 95 chr10 80785868 80786194 -59530571 - L2 LINE L2 -50 3222 2910 397 256 30 53 chr10 80786526 80786659 -59530106 - MIR SINE MIR -112 150 21 863 129 0 0 chr10 80789310 80789451 -59527314 - FLAM_C SINE Alu 0 141 1 201 262 202 0 chr10 80789532 80789616 -59527149 - MIR SINE MIR -92 170 70 905 321 156 28 chr10 80789867 80790937 -59525828 + L2 LINE L2 1351 2557 -757 1794 120 101 4 chr10 80791521 80791788 -59524977 - AluSx SINE Alu -19 293 1 912 200 6 11 chr10 80791788 80791968 -59524797 - MER3 DNA MER1_type -28 181 3 486 243 60 35 chr10 80792041 80792263 -59524502 - L1ME LINE L1 -321 5800 5567 186 43 0 0 chr10 80792510 80792533 -59524232 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 1418 156 19 53 chr10 80792536 80792685 -59524080 - AluJo SINE Alu -30 282 144 2339 98 0 0 chr10 80792685 80792980 -59523785 - AluSc SINE Alu -14 295 1 1418 156 19 53 chr10 80792980 80793093 -59523672 - AluJo SINE Alu -168 144 29 246 284 84 0 chr10 80793337 80793432 -59523333 - L1P LINE L1 -1142 5004 4902 441 239 138 8 chr10 80793486 80793616 -59523149 + MIR SINE MIR 106 252 -10 1115 277 70 46 chr10 80793681 80794223 -59522542 - LTR67 LTR ERVL 0 557 3 355 296 106 31 chr10 80794359 80794812 -59521953 - L1ME LINE L1 -1528 4618 4132 401 284 83 18 chr10 80795113 80795282 -59521483 - MLT1H LTR MaLR -341 208 29 318 320 69 29 chr10 80795410 80796131 -59520634 - L1ME LINE L1 -2174 3972 3223 370 310 148 55 chr10 80796136 80796771 -59519994 + L2 LINE L2 1566 2259 -1055 208 331 123 20 chr10 80796923 80797174 -59519591 + L2 LINE L2 2698 2974 -340 2186 103 0 14 chr10 80797411 80797738 -59519027 + AluSc SINE Alu 1 309 0 282 234 189 18 chr10 80797783 80797894 -59518871 + MIR SINE MIR 78 207 -55 2369 234 33 19 chr10 80798040 80798711 -59518054 + L1ME1 LINE L1 5482 6161 -5 454 257 68 79 chr10 80798828 80799120 -59517645 + MLT1L LTR MaLR 135 423 -192 1139 238 82 64 chr10 80799266 80799812 -59516953 - MLT1G LTR MaLR 0 590 35 531 346 46 42 chr10 80799976 80800410 -59516355 + L2 LINE L2 2832 3267 -5 220 393 0 0 chr10 80800765 80800849 -59515916 - L2 LINE L2 -7 3265 3182 677 336 36 9 chr10 80801086 80801422 -59515343 - L2 LINE L2 -512 2802 2458 231 286 0 0 chr10 80801804 80801874 -59514891 + L1MC4 LINE L1 6636 6705 -1337 186 43 0 0 chr10 80801874 80801897 -59514868 + (TATATG)n Simple_repeat Simple_repeat 2 24 0 241 312 70 0 chr10 80801959 80802116 -59514649 - L2 LINE L2 -258 3014 2847 288 0 0 0 chr10 80802673 80802705 -59514060 + (CA)n Simple_repeat Simple_repeat 1 32 0 377 322 95 18 chr10 80803482 80803755 -59513010 - L3 LINE CR1 -109 1468 1175 504 263 108 11 chr10 80803971 80804157 -59512608 + LTR16A LTR ERVL 240 443 -7 880 311 73 66 chr10 80804170 80804932 -59511833 + HERV16 LTR ERVL 7 774 -4222 1461 301 73 3 chr10 80805041 80805629 -59511136 + HERV16 LTR ERVL 921 1549 -3447 452 159 0 0 chr10 80805657 80805726 -59511039 + MER81 DNA DNA 45 113 -1 464 225 104 100 chr10 80805737 80805968 -59510797 + HERV16 LTR ERVL 1629 1860 -3136 1012 323 72 27 chr10 80806063 80806775 -59509990 + HERV16 LTR ERVL 2029 2772 -2882 1357 193 55 31 chr10 80806779 80807069 -59509696 - MSTD LTR MaLR -99 297 1 425 286 0 0 chr10 80807070 80807161 -59509604 + HERV16 LTR ERVL 2974 3064 -1932 2844 353 49 30 chr10 80807201 80809130 -59507635 + HERV16 LTR ERVL 3195 5161 -603 273 270 20 59 chr10 80809346 80809498 -59507267 + HERV16 LTR ERVL 4851 4996 0 975 316 48 19 chr10 80809512 80809926 -59506839 + LTR16A LTR ERVL 15 440 -10 666 335 119 46 chr10 80809933 80810159 -59506606 - L3 LINE CR1 -401 1176 968 1657 193 29 0 chr10 80810159 80810434 -59506331 - AluJo SINE Alu -6 306 24 666 335 119 46 chr10 80810434 80810703 -59506062 - L3 LINE CR1 -609 968 645 455 311 136 15 chr10 80810836 80811042 -59505723 - MIR SINE MIR -1 261 31 322 192 301 27 chr10 80811301 80811447 -59505318 - MIR SINE MIR -1 261 76 293 295 79 36 chr10 80811493 80811632 -59505133 - MIR3 SINE MIR -63 145 1 * 305 250 55 86 chr10 80811632 80811747 -59505018 + L2 LINE L2 3191 3301 -12 494 258 109 14 chr10 80812946 80813128 -59503637 - MIR SINE MIR -11 197 2 2726 163 13 9 chr10 80813196 80813661 -59503104 - MLT1C LTR MaLR 0 467 1 361 182 34 0 chr10 80814696 80814784 -59501981 + CT-rich Low_complexity Low_complexity 1 91 0 348 261 9 52 chr10 80814967 80815082 -59501683 - MIR SINE MIR -55 207 98 1352 231 58 21 chr10 80815083 80815333 -59501432 - Charlie4a DNA MER1_type -1455 506 236 957 249 72 0 chr10 80815333 80815542 -59501223 + MER58A DNA MER1_type 1 224 0 1352 231 58 21 chr10 80815542 80815672 -59501093 - Charlie4a DNA MER1_type -1725 236 112 203 267 0 0 chr10 80816004 80816049 -59500716 + MER91C DNA MER1_type 138 182 -8 208 294 0 0 chr10 80816300 80816351 -59500414 - L2 LINE L2 -12 3260 3210 271 271 196 46 chr10 80816361 80816512 -59500253 + MIR SINE MIR 33 208 -54 217 205 0 0 chr10 80816801 80816840 -59499925 + (CAT)n Simple_repeat Simple_repeat 3 41 0 252 333 72 8 chr10 80817154 80817335 -59499430 - MIR3 SINE MIR -15 247 15 273 89 0 0 chr10 80817395 80817440 -59499325 + (ACTG)n Simple_repeat Simple_repeat 4 48 0 426 272 174 41 chr10 80819748 80819943 -59496822 + MIR SINE MIR 16 236 -26 502 73 0 0 chr10 80820113 80820181 -59496584 + MLT2B1 LTR ERVL 2 69 -485 1223 171 55 6 chr10 80820406 80820767 -59495998 + MLT2B1 LTR ERVL 86 511 -4 423 242 105 59 chr10 80820876 80821029 -59495736 + MLT1I LTR MaLR 291 409 0 198 315 231 21 chr10 80821468 80821611 -59495154 + L2 LINE L2 3100 3272 0 344 282 77 47 chr10 80821728 80821898 -59494867 - MIR3 SINE MIR -11 197 23 557 291 73 39 chr10 80822052 80822258 -59494507 + MIR SINE MIR 35 247 -15 446 271 161 43 chr10 80822450 80822730 -59494035 + L2 LINE L2 3001 3313 0 320 311 25 17 chr10 80822878 80822997 -59493768 - MIR3 SINE MIR -81 127 8 217 299 31 21 chr10 80823507 80823604 -59493161 - MER5A DNA MER1_type -91 98 1 342 344 16 8 chr10 80824906 80825031 -59491734 - MIR3 SINE MIR -48 160 35 518 273 105 3 chr10 80825053 80825258 -59491507 - MIR SINE MIR -25 237 11 262 204 139 56 chr10 80825449 80825557 -59491208 - MER103 DNA DNA -46 120 4 434 298 126 35 chr10 80825858 80826224 -59490541 + L1MC4a LINE L1 5532 5930 -1878 213 328 0 0 chr10 80826247 80826305 -59490460 + (CA)n Simple_repeat Simple_repeat 1 58 0 747 288 19 39 chr10 80826306 80826563 -59490202 + MIR SINE MIR 1 252 -10 583 191 77 24 chr10 80826570 80826738 -59490027 + MER104 DNA MER2_type 1 177 -3 428 233 23 16 chr10 80826937 80827066 -59489699 - LTR67 LTR ERVL -1 556 427 513 183 21 35 chr10 80827630 80827772 -59488993 + LTR67 LTR ERVL 417 556 -1 189 0 0 0 chr10 80828082 80828103 -59488662 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 253 271 24 24 chr10 80828948 80829033 -59487732 - MLT1L LTR MaLR -530 85 1 180 294 200 6 chr10 80830939 80831099 -59485666 + MIR SINE MIR 53 243 -19 325 323 164 15 chr10 80831340 80831541 -59485224 - MIR SINE MIR -12 250 20 372 281 146 34 chr10 80832138 80832316 -59484449 - L3 LINE CR1 -194 1383 1186 349 289 119 38 chr10 80833069 80833228 -59483537 + MIR SINE MIR 84 255 -7 525 257 179 0 chr10 80833770 80833949 -59482816 - MIR SINE MIR -40 222 12 525 337 55 0 chr10 80833962 80834161 -59482604 - MIR SINE MIR -24 238 29 244 264 154 11 chr10 80834202 80834293 -59482472 - L2 LINE L2 0 3272 3169 513 267 33 11 chr10 80834753 80834933 -59481832 - MLT1I LTR MaLR -225 184 1 551 215 92 12 chr10 80834945 80835108 -59481657 + MER113 DNA MER1_type? 208 383 -138 490 140 5 205 chr10 80835109 80835309 -59481456 - L2 LINE L2 -8 3305 3146 277 333 22 49 chr10 80835748 80835931 -59480834 - MIR SINE MIR -2 260 83 415 272 81 57 chr10 80836185 80836483 -59480282 + L1ME LINE L1 5510 5814 -307 649 288 46 32 chr10 80836761 80836980 -59479785 - MIR SINE MIR -34 228 7 337 294 35 28 chr10 80837382 80837525 -59479240 + MLT1J2 LTR MaLR 270 413 -37 296 313 26 41 chr10 80838262 80838457 -59478308 - L2 LINE L2 -4 3309 3118 1280 266 60 36 chr10 80838722 80838769 -59477996 + MLT1J LTR MaLR 1 45 -466 2079 146 0 7 chr10 80838769 80839078 -59477687 - AluSx SINE Alu -5 307 1 1280 266 60 36 chr10 80839078 80839529 -59477236 + MLT1J LTR MaLR 45 511 0 263 366 99 14 chr10 80839689 80839831 -59476934 - L2 LINE L2 -4 3268 3115 189 361 60 0 chr10 80839983 80840066 -59476699 - L2 LINE L2 -27 3286 3199 219 233 0 0 chr10 80840334 80840377 -59476388 + (TG)n Simple_repeat Simple_repeat 2 44 0 1890 171 40 0 chr10 80840387 80840715 -59476050 - MER7A DNA MER2_type -7 339 1 223 242 0 30 chr10 80840715 80840781 -59475984 + (TG)n Simple_repeat Simple_repeat 1 64 0 217 347 41 20 chr10 80840818 80840965 -59475800 - L2 LINE L2 -213 3059 2910 197 234 47 31 chr10 80840991 80841004 -59475761 - L2 LINE L2 -548 2766 2755 1592 105 5 5 chr10 80841004 80841214 -59475551 - AluSg/x SINE Alu -29 281 72 197 234 47 31 chr10 80841214 80841264 -59475501 - L2 LINE L2 -559 2755 2702 1461 87 5 24 chr10 80841268 80841474 -59475291 - AluYa5 SINE Alu 0 311 110 207 0 0 0 chr10 80841478 80841501 -59475264 + (T)n Simple_repeat Simple_repeat 1 23 0 724 213 0 0 chr10 80841527 80841649 -59475116 + FLAM_A SINE Alu 6 127 -15 1536 84 9 35 chr10 80841795 80842021 -59474744 - L1PA10 LINE L1 -4 6164 5945 966 86 0 0 chr10 80842139 80842290 -59474475 + (TCTA)n Simple_repeat Simple_repeat 2 152 0 372 226 34 82 chr10 80842473 80842619 -59474146 + HAL1 LINE L1 2368 2506 -1 280 248 168 35 chr10 80842705 80842818 -59473947 + L2 LINE L2 2399 2526 -788 677 303 96 43 chr10 80842846 80843553 -59473212 + L1ME LINE L1 4786 5562 -745 282 330 86 23 chr10 80843577 80843798 -59472967 + L1ME LINE L1 5586 5820 -301 372 279 68 44 chr10 80844021 80844315 -59472450 + L1ME4a LINE L1 5592 5892 -229 708 284 65 73 chr10 80844570 80845078 -59471687 + L1ME4a LINE L1 5265 5768 -353 626 290 28 31 chr10 80845096 80845420 -59471345 + MER46C DNA MER2_type 1 323 -15 2289 117 0 0 chr10 80845498 80845806 -59470959 - AluSg SINE Alu -2 308 1 296 252 65 36 chr10 80845898 80846037 -59470728 + L1ME4a LINE L1 5962 6104 -17 283 282 0 0 chr10 80846949 80847020 -59469745 + MIR SINE MIR 82 152 -56 549 231 115 0 chr10 80847042 80847172 -59469593 + MER117 DNA MER1_type 17 161 -36 360 260 32 24 chr10 80847820 80847943 -59468822 + MIR SINE MIR 19 142 -66 1095 285 54 34 chr10 80848129 80848789 -59467976 - L2 LINE L2 -164 3149 2477 210 217 22 0 chr10 80848788 80848834 -59467931 + L2 LINE L2 3210 3256 -16 * 1487 215 48 20 chr10 80848948 80849301 -59467464 - MLT1A1 LTR MaLR -2 363 1 373 245 0 0 chr10 80850030 80850136 -59466629 - MER113 DNA MER1_type? -346 175 70 582 314 36 24 chr10 80851057 80851305 -59465460 + MIR SINE MIR 12 262 0 247 309 24 56 chr10 80851927 80852053 -59464712 - MIR SINE MIR -66 142 21 310 330 112 29 chr10 80852521 80852727 -59464038 + MIR SINE MIR 23 245 -17 273 306 117 0 chr10 80852896 80853007 -59463758 + MIR3 SINE MIR 79 202 -6 232 301 54 32 chr10 80853262 80853355 -59463410 + MIR3 SINE MIR 67 161 -47 256 268 80 36 chr10 80855117 80855229 -59461536 + MIR SINE MIR 89 205 -57 250 262 0 16 chr10 80855711 80855772 -59460993 + CT-rich Low_complexity Low_complexity 1 60 0 393 217 36 36 chr10 80855782 80855948 -59460817 - L1MC5 LINE L1 -172 7789 7624 297 319 17 17 chr10 80855953 80856072 -59460693 - MIR SINE MIR -65 197 79 249 325 13 0 chr10 80856117 80856194 -59460571 - L2 LINE L2 -1 3312 3235 499 190 178 37 chr10 80856228 80856391 -59460374 + MER5A DNA MER1_type 4 189 0 468 202 20 0 chr10 80856404 80856503 -59460262 + MER5B DNA MER1_type 7 107 -71 303 320 56 8 chr10 80856514 80856639 -59460126 + MIR SINE MIR 132 262 0 279 274 44 35 chr10 80857632 80857745 -59459020 + MIR SINE MIR 17 130 -78 2511 70 3 19 chr10 80857752 80858068 -59458697 - AluY SINE Alu 0 311 1 228 267 47 80 chr10 80858183 80858333 -59458432 - MER117 DNA MER1_type -1 196 52 279 0 0 0 chr10 80858351 80858382 -59458383 + (TG)n Simple_repeat Simple_repeat 2 32 0 2296 96 0 7 chr10 80858382 80858673 -59458092 - AluSq SINE Alu -24 289 1 311 248 77 17 chr10 80859401 80859518 -59457247 + Charlie8 DNA MER1_type 107 230 -2187 228 250 36 0 chr10 80859622 80859678 -59457087 + MIR SINE MIR 78 135 -73 185 351 0 0 chr10 80859714 80859788 -59456977 + MER5A DNA MER1_type 10 83 -106 267 267 97 61 chr10 80860587 80860752 -59456013 + MIR SINE MIR 77 247 -15 182 324 82 60 chr10 80860908 80860955 -59455810 - MIR SINE MIR -71 191 147 1986 142 0 21 chr10 80860955 80861277 -59455488 + AluSx SINE Alu 1 316 0 182 324 82 60 chr10 80861277 80861410 -59455355 - MIR SINE MIR -115 147 6 740 156 19 98 chr10 80861828 80862033 -59454732 + MLT1C LTR MaLR 12 200 -267 552 262 187 19 chr10 80863935 80864149 -59452616 + MIR SINE MIR 13 262 0 241 294 43 11 chr10 80864223 80864315 -59452450 + MIR SINE MIR 158 252 -10 237 250 42 62 chr10 80864330 80864426 -59452339 + L2 LINE L2 3155 3248 -24 1873 249 21 54 chr10 80864439 80865089 -59451676 + L1MC4 LINE L1 7269 7897 -145 212 59 29 0 chr10 80865103 80865137 -59451628 + (CA)n Simple_repeat Simple_repeat 2 36 0 1772 246 60 22 chr10 80865209 80865272 -59451493 - L1ME3A LINE L1 -219 5951 5892 657 69 0 0 chr10 80865272 80865359 -59451406 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2095 122 0 4 chr10 80865361 80865640 -59451125 - AluSx SINE Alu -34 278 1 1772 246 60 22 chr10 80865640 80866368 -59450397 - L1ME3A LINE L1 -278 5892 5124 253 333 64 21 chr10 80866844 80866985 -59449780 - L2 LINE L2 -216 3056 2910 182 294 20 0 chr10 80867030 80867081 -59449684 + MIR3 SINE MIR 115 166 -42 234 245 0 0 chr10 80867908 80867961 -59448804 + CT-rich Low_complexity Low_complexity 2 54 0 450 236 194 18 chr10 80868007 80868172 -59448593 - MER63A DNA MER1_type -5 205 12 317 313 124 0 chr10 80869231 80869363 -59447402 + MIR3 SINE MIR 46 191 -41 284 297 178 8 chr10 80870006 80870124 -59446641 - MIR SINE MIR -63 145 8 2222 110 0 0 chr10 80870337 80870629 -59446136 + AluSq SINE Alu 7 298 -15 319 148 37 46 chr10 80871521 80871629 -59445136 + GA-rich Low_complexity Low_complexity 1 107 0 256 277 11 0 chr10 80872245 80872422 -59444343 + (CA)n Simple_repeat Simple_repeat 2 180 0 774 319 91 18 chr10 80873525 80874041 -59442724 + L2 LINE L2 2734 3287 -26 207 241 46 65 chr10 80874187 80874295 -59442470 - MIR SINE MIR -14 248 143 446 202 12 0 chr10 80874424 80874508 -59442257 - MIR SINE MIR -98 164 80 414 234 75 0 chr10 80874757 80874864 -59441901 + MIR SINE MIR 66 180 -82 189 0 0 0 chr10 80876162 80876183 -59440582 + (TC)n Simple_repeat Simple_repeat 1 21 0 476 213 120 60 chr10 80876852 80877002 -59439763 - MIR SINE MIR -84 178 20 327 296 83 52 chr10 80877408 80877634 -59439131 + MIR SINE MIR 19 256 -6 42882 38 1 3 chr10 80877936 80884136 -59432629 + L1PA4 LINE L1 13 6196 0 282 311 0 0 chr10 80884148 80884222 -59432543 + MLT1J LTR MaLR 105 178 -333 660 237 0 6 chr10 80884262 80884418 -59432347 + L1MA10 LINE L1 6180 6334 0 221 143 0 0 chr10 80884671 80884706 -59432059 + L2 LINE L2 3279 3313 0 450 236 229 14 chr10 80885963 80886103 -59430662 + MER5B DNA MER1_type 2 171 -7 937 179 5 27 chr10 80886122 80886306 -59430459 - MER5A DNA MER1_type -6 183 4 270 278 87 43 chr10 80886449 80886564 -59430201 + MIR SINE MIR 50 169 -93 218 316 0 0 chr10 80886621 80886678 -59430087 + MIR SINE MIR 42 98 -110 186 390 92 6 chr10 80887262 80887426 -59429339 + L2 LINE L2 3095 3272 0 2755 95 36 5 chr10 80887622 80888010 -59428755 - L1PA11 LINE L1 -6 6168 5769 204 97 0 0 chr10 80888019 80888050 -59428715 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 28921 96 5 20 chr10 80888050 80893432 -59423333 - L1PA7 LINE L1 -11 6458 1162 742 83 0 0 chr10 80893430 80893526 -59423239 - L1PA7 LINE L1 -6365 96 1 * 3342 89 20 4 chr10 80893526 80894032 -59422733 - L1PA11 LINE L1 -379 5789 5276 448 296 24 8 chr10 80895980 80896105 -59420660 - MIR3 SINE MIR -4 204 78 210 288 0 15 chr10 80897784 80897850 -59418915 - L2 LINE L2 0 3313 3249 228 86 0 0 chr10 80897882 80897917 -59418848 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 2042 129 4 0 chr10 80897917 80898196 -59418569 - AluSq SINE Alu -33 280 1 240 151 0 14 chr10 80898345 80898390 -59418375 + MIR SINE MIR 115 157 -105 230 303 66 57 chr10 80898562 80898684 -59418081 + MIR3 SINE MIR 81 203 -5 537 301 31 98 chr10 80899004 80899329 -59417436 - L2 LINE L2 0 3272 2970 466 234 62 14 chr10 80899883 80900028 -59416737 + MER103 DNA DNA 14 165 -1 2413 92 0 3 chr10 80900136 80900442 -59416323 + AluSg SINE Alu 1 305 -5 237 255 20 0 chr10 80900444 80900495 -59416270 - L3 LINE CR1 -24 1553 1502 223 301 70 70 chr10 80901065 80901208 -59415557 - MIR3 SINE MIR -59 149 7 235 314 13 19 chr10 80901966 80902122 -59414643 + G-rich Low_complexity Low_complexity 6 160 0 203 238 0 0 chr10 80902250 80902292 -59414473 - L2 LINE L2 -17 3255 3214 231 321 12 68 chr10 80902474 80902636 -59414129 - MIR SINE MIR -30 232 80 811 161 0 12 chr10 80904296 80904458 -59412307 - MER96B DNA MER1_type? -257 160 1 1001 222 71 4 chr10 80904597 80904822 -59411943 - MIR SINE MIR -19 243 4 382 254 30 60 chr10 80905609 80905743 -59411022 + MIR SINE MIR 21 150 -112 236 325 55 95 chr10 80906075 80906401 -59410364 + L2 LINE L2 2910 3222 -50 467 308 59 94 chr10 80906436 80906722 -59410043 + L2 LINE L2 2962 3237 -35 268 341 96 51 chr10 80907625 80907939 -59408826 - L3 LINE CR1 -820 757 430 241 293 54 27 chr10 80908286 80908433 -59408332 + MIR3 SINE MIR 46 196 -12 225 280 45 96 chr10 80908451 80908608 -59408157 + MIR3 SINE MIR 60 208 0 337 245 19 56 chr10 80909516 80909655 -59407110 + MIR3 SINE MIR 22 159 -49 466 243 195 32 chr10 80909658 80909843 -59406922 + MER102a DNA MER1_type 3 217 -113 4121 185 61 27 chr10 80909888 80910199 -59406566 + L1MB8 LINE L1 4639 4938 -1240 2231 113 3 0 chr10 80910199 80910490 -59406275 + AluSp SINE Alu 1 292 -21 4121 185 61 27 chr10 80910490 80911656 -59405109 + L1MB8 LINE L1 4938 6172 -6 347 319 30 0 chr10 80911660 80911795 -59404970 + MER102a DNA MER1_type 189 327 -3 263 333 50 0 chr10 80911888 80912008 -59404757 + MIR3 SINE MIR 68 193 -15 242 323 52 47 chr10 80912506 80912698 -59404067 - MIR SINE MIR -21 241 49 325 333 111 12 chr10 80912946 80913117 -59403648 + MIR SINE MIR 57 244 -18 387 0 0 0 chr10 80913520 80913563 -59403202 + (TG)n Simple_repeat Simple_repeat 2 44 0 486 291 36 0 chr10 80913752 80913917 -59402848 - MER102a DNA MER1_type -68 262 92 237 301 0 32 chr10 80914125 80914218 -59402547 + G-rich Low_complexity Low_complexity 1 90 0 227 292 79 34 chr10 80914359 80914448 -59402317 - L2 LINE L2 -61 3211 3119 1445 218 110 16 chr10 80914454 80914567 -59402198 + MER47B DNA MER2_type 1 102 -2221 2047 61 19 0 chr10 80914567 80914829 -59401936 - L1PA4 LINE L1 -6 6149 5883 1445 218 110 16 chr10 80914829 80915096 -59401669 + MER47B DNA MER2_type 102 417 -1 207 100 0 0 chr10 80915539 80915569 -59401196 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 217 345 28 48 chr10 80915580 80915725 -59401040 - L2 LINE L2 -55 3258 3117 317 231 78 50 chr10 80915848 80915989 -59400776 + MIR3 SINE MIR 39 184 -24 383 226 49 20 chr10 80916374 80916476 -59400289 + MIR SINE MIR 48 152 -56 1825 123 49 28 chr10 80918317 80918621 -59398144 - AluSx SINE Alu 0 312 1 941 300 107 17 chr10 80918638 80919223 -59397542 - L2 LINE L2 0 3313 2671 201 241 56 0 chr10 80919304 80919358 -59397407 + MIR SINE MIR 108 164 -98 402 261 115 7 chr10 80919958 80920115 -59396650 + MIR SINE MIR 21 188 -69 212 289 0 0 chr10 80920513 80920558 -59396207 + L2 LINE L2 3245 3289 -24 1161 84 24 36 chr10 80920681 80920847 -59395918 - AluSg/x SINE Alu -18 292 129 461 283 137 9 chr10 80920965 80921188 -59395577 + MIR SINE MIR 6 254 -8 279 366 74 21 chr10 80922367 80922610 -59394155 - MIR SINE MIR -5 257 2 257 268 82 21 chr10 80923099 80923196 -59393569 - MIR3 SINE MIR -36 172 70 191 223 149 32 chr10 80924059 80924153 -59392612 + MIR SINE MIR 43 147 -61 330 173 0 0 chr10 80924291 80924343 -59392422 - MIR3 SINE MIR -51 157 106 412 306 109 32 chr10 80924938 80925370 -59391395 - MLT1L LTR MaLR -131 484 20 922 221 58 0 chr10 80925725 80925933 -59390832 - MER58A DNA MER1_type -3 221 2 863 129 0 0 chr10 80926019 80926160 -59390605 - FLAM_C SINE Alu 0 141 1 201 262 202 0 chr10 80926241 80926325 -59390440 - MIR SINE MIR -92 170 70 878 318 159 31 chr10 80926576 80927646 -59389119 + L2 LINE L2 1351 2557 -757 1794 120 101 4 chr10 80928230 80928497 -59388268 - AluSx SINE Alu -19 293 1 912 200 6 11 chr10 80928497 80928677 -59388088 - MER3 DNA MER1_type -28 181 3 460 249 60 35 chr10 80928750 80928972 -59387793 - L1ME LINE L1 -321 5800 5567 186 43 0 0 chr10 80929219 80929242 -59387523 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 1068 152 0 35 chr10 80929245 80929394 -59387371 - AluJo SINE Alu -30 282 138 2455 60 3 20 chr10 80929394 80929696 -59387069 - AluY SINE Alu -14 297 1 1068 152 0 35 chr10 80929696 80929717 -59387048 - AluJo SINE Alu -174 138 118 228 267 47 80 chr10 80929811 80929961 -59386804 - MER117 DNA MER1_type -1 196 52 279 0 0 0 chr10 80929979 80930010 -59386755 + (TG)n Simple_repeat Simple_repeat 2 32 0 2296 96 0 7 chr10 80930010 80930301 -59386464 - AluSq SINE Alu -24 289 1 311 248 77 17 chr10 80931029 80931146 -59385619 + Charlie8 DNA MER1_type 107 230 -2187 228 250 36 0 chr10 80931250 80931306 -59385459 + MIR SINE MIR 78 135 -73 185 351 0 0 chr10 80931342 80931416 -59385349 + MER5A DNA MER1_type 10 83 -106 267 267 97 61 chr10 80932215 80932380 -59384385 + MIR SINE MIR 77 247 -15 182 324 82 60 chr10 80932536 80932583 -59384182 - MIR SINE MIR -71 191 147 1986 142 0 21 chr10 80932583 80932905 -59383860 + AluSx SINE Alu 1 316 0 182 324 82 60 chr10 80932905 80933038 -59383727 - MIR SINE MIR -115 147 6 1549 186 55 70 chr10 80933449 80933918 -59382847 + MLT1C LTR MaLR 6 467 0 181 190 69 52 chr10 80934200 80934258 -59382507 - L2 LINE L2 -534 2780 2722 242 183 14 0 chr10 80934668 80934739 -59382026 + (CA)n Simple_repeat Simple_repeat 1 72 0 262 186 12 35 chr10 80935179 80935351 -59381414 + (CA)n Simple_repeat Simple_repeat 2 169 0 216 279 54 39 chr10 80935948 80936077 -59380688 + L2 LINE L2 2857 2987 -285 2870 19 0 0 chr10 80936140 80936451 -59380314 - AluY SINE Alu 0 311 1 188 333 0 0 chr10 80936479 80936533 -59380232 + L2 LINE L2 3169 3222 -91 219 267 95 38 chr10 80936589 80936694 -59380071 + MIR SINE MIR 102 212 -50 2173 73 11 7 chr10 80936809 80937084 -59379681 + AluY SINE Alu 1 276 -35 234 27 27 27 chr10 80937087 80937124 -59379641 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 246 304 0 0 chr10 80937537 80937606 -59379159 + MIR SINE MIR 62 130 -132 389 253 0 32 chr10 80938204 80938299 -59378466 - MIR SINE MIR -65 197 106 265 293 142 9 chr10 80938324 80938430 -59378335 - L2 LINE L2 0 3272 3153 410 341 6 11 chr10 80938939 80939118 -59377647 + MLT1L LTR MaLR 309 486 -129 244 303 30 20 chr10 80939575 80939674 -59377091 - MIR SINE MIR -55 207 108 222 105 0 0 chr10 80940343 80940381 -59376384 + (CTAAA)n Simple_repeat Simple_repeat 3 40 0 525 294 96 8 chr10 80941314 80941685 -59375080 - MLT1J LTR MaLR -90 421 15 197 299 58 23 chr10 80943572 80943659 -59373106 - L2 LINE L2 -39 3233 3144 376 266 95 30 chr10 80943662 80943831 -59372934 - MIR SINE MIR -6 256 77 194 267 22 56 chr10 80944072 80944162 -59372603 - L2 LINE L2 -43 3229 3143 314 320 57 0 chr10 80944207 80944329 -59372436 + MIR SINE MIR 54 182 -80 258 192 0 0 chr10 80944560 80944612 -59372153 + C-rich Low_complexity Low_complexity 4 55 0 1901 159 3 28 chr10 80944614 80944768 -59371997 - AluJo SINE Alu 0 449 293 1273 66 0 16 chr10 80944768 80944951 -59371814 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1901 159 3 28 chr10 80944951 80945253 -59371512 - AluJo SINE Alu -156 293 1 204 47 47 23 chr10 80947519 80947562 -59369203 + (TTTG)n Simple_repeat Simple_repeat 3 46 0 742 211 183 0 chr10 80947887 80948067 -59368698 + MER58A DNA MER1_type 4 216 -8 598 285 72 16 chr10 80948230 80948423 -59368342 - MIR SINE MIR -56 206 3 270 0 0 0 chr10 80948994 80949024 -59367741 + (CA)n Simple_repeat Simple_repeat 2 31 0 257 326 126 8 chr10 80949545 80949806 -59366959 + L2 LINE L2 2589 2880 -434 192 364 45 45 chr10 80950081 80950213 -59366552 + L2 LINE L2 3182 3313 0 830 224 78 86 chr10 80950687 80951070 -59365695 + MLT1C LTR MaLR 6 385 -82 525 232 14 52 chr10 80952205 80952437 -59364328 + L1MC4 LINE L1 7524 7703 -105 2052 137 10 3 chr10 80952442 80952742 -59364023 + AluSx SINE Alu 5 306 -6 414 15 77 0 chr10 80952747 80952812 -59363953 + GA-rich Low_complexity Low_complexity 3 72 0 450 306 73 10 chr10 80952815 80953021 -59363744 + L1MC4 LINE L1 7824 8042 0 496 266 7 22 chr10 80953060 80953075 -59363690 - L1MA10 LINE L1 -2 6332 6318 368 293 58 62 chr10 80953075 80953317 -59363448 - L1ME1 LINE L1 -5 6161 5921 449 69 42 0 chr10 80953318 80953390 -59363375 - MADE1 DNA Mariner -2 78 4 376 60 0 0 chr10 80953412 80953462 -59363303 - MADE1 DNA Mariner -30 50 1 1932 227 65 16 chr10 80953462 80953973 -59362792 - L1ME1 LINE L1 -244 5922 5387 2533 102 6 6 chr10 80954308 80954672 -59362093 + THE1B LTR MaLR 1 364 0 352 333 36 70 chr10 80956489 80956874 -59359891 - L2 LINE L2 -55 3258 2887 392 279 106 6 chr10 80958027 80958206 -59358559 - MIR SINE MIR 0 262 66 1577 238 35 28 chr10 80958975 80959408 -59357357 + LTR16A LTR ERVL 15 450 0 290 269 39 29 chr10 80960066 80960170 -59356595 + MER103 DNA DNA 61 165 -1 874 223 99 13 chr10 80960812 80961045 -59355720 + MIR SINE MIR 7 259 -3 275 204 194 10 chr10 80961091 80961194 -59355571 - L2 LINE L2 -1 3271 3150 262 378 14 34 chr10 80961370 80961579 -59355186 + L2 LINE L2 2978 3182 -90 397 325 57 22 chr10 80961588 80961816 -59354949 + MIR SINE MIR 3 238 -24 206 256 122 11 chr10 80961914 80962004 -59354761 + MIR3 SINE MIR 97 196 -12 199 333 17 0 chr10 80962010 80962070 -59354695 - MIR3 SINE MIR -31 177 117 324 333 0 22 chr10 80962782 80962920 -59353845 - MIR3 SINE MIR -63 145 11 374 218 0 39 chr10 80962933 80963011 -59353754 - L1MCa LINE L1 -4357 2069 1995 372 269 0 32 chr10 80962959 80963052 -59353713 + L1MC4 LINE L1 6614 6703 -1339 * 480 146 0 0 chr10 80963185 80963274 -59353491 + (CA)n Simple_repeat Simple_repeat 1 89 0 294 219 239 4 chr10 80963378 80963546 -59353219 + MIR SINE MIR 21 231 -31 228 260 96 0 chr10 80964660 80964733 -59352032 + MIR SINE MIR 85 164 -98 1079 274 43 58 chr10 80965629 80966143 -59350622 + MLT1J LTR MaLR 4 509 -2 204 345 48 0 chr10 80966233 80966317 -59350448 - L2 LINE L2 -35 3237 3150 444 285 90 48 chr10 80966451 80966705 -59350060 + MIR SINE MIR 2 262 0 216 97 0 0 chr10 80967082 80967113 -59349652 + (TGGA)n Simple_repeat Simple_repeat 1 31 0 711 270 103 73 chr10 80967890 80968316 -59348449 + MLT1J LTR MaLR 6 444 -67 1149 183 24 0 chr10 80969900 80970108 -59346657 - MER20 DNA MER1_type 0 219 7 391 319 123 0 chr10 80970215 80970378 -59346387 + MIR SINE MIR 65 247 -15 195 244 104 92 chr10 80970583 80970747 -59346018 + L2 LINE L2 2916 3081 -191 414 267 50 50 chr10 80970779 80970940 -59345825 - LTR16C LTR ERVL -17 474 314 2321 93 3 3 chr10 80971064 80971366 -59345399 - AluSq SINE Alu -11 302 1 201 74 0 0 chr10 80971786 80971813 -59344952 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 447 293 128 21 chr10 80972421 80972609 -59344156 - LTR16C LTR ERVL 0 491 284 267 331 42 7 chr10 80973071 80973213 -59343552 - LTR67 LTR ERVL -3 554 408 2692 179 10 29 chr10 80973332 80973924 -59342841 + L1MB8 LINE L1 5592 6172 -6 285 320 108 40 chr10 80975543 80975765 -59341000 - MIR SINE MIR -6 256 20 256 381 31 0 chr10 80975780 80975877 -59340888 - MIR SINE MIR -56 206 107 218 211 295 21 chr10 80976343 80976438 -59340327 + MER5A DNA MER1_type 36 156 -33 1965 291 114 39 chr10 80977006 80978351 -59338414 - L1MEc LINE L1 -4898 1498 53 201 359 39 0 chr10 80978434 80978537 -59338228 - L3 LINE CR1 -125 1452 1346 1552 184 91 47 chr10 80979450 80979858 -59336907 + MSTB LTR MaLR 1 426 0 3473 221 55 7 chr10 80979892 80980878 -59335887 - L1ME1 LINE L1 -11 6155 5120 2498 84 0 10 chr10 80981107 80981418 -59335347 - AluSq SINE Alu -5 308 1 2122 184 29 5 chr10 80981458 80981872 -59334893 - MSTA LTR MaLR -4 424 1 532 312 45 94 chr10 80981899 80982344 -59334421 - L1ME1 LINE L1 -2509 3637 3215 201 189 0 0 chr10 80982471 80982508 -59334257 - MIR SINE MIR -64 144 108 217 288 82 0 chr10 80983249 80983322 -59333443 + L2 LINE L2 3017 3095 -177 386 280 206 0 chr10 80983380 80983555 -59333210 - L2 LINE L2 -1 3312 3102 216 227 0 91 chr10 80984050 80984138 -59332627 + MIR3 SINE MIR 109 188 -20 333 315 171 23 chr10 80985516 80985732 -59331033 - MIR SINE MIR -6 256 9 1447 192 83 9 chr10 80985738 80986076 -59330689 - MLT1A1 LTR MaLR 0 365 3 297 322 0 0 chr10 80986856 80986943 -59329822 + MIR SINE MIR 66 152 -110 229 273 0 18 chr10 80987507 80987562 -59329203 + MIR SINE MIR 150 203 -59 529 311 107 0 chr10 80988024 80988220 -59328545 - MIR SINE MIR -44 218 2 1502 350 71 33 chr10 80988732 80989839 -59326926 - L3 LINE CR1 -29 1548 400 206 173 0 19 chr10 80989882 80989934 -59326831 + GA-rich Low_complexity Low_complexity 2 52 0 1735 156 7 3 chr10 80990532 80990827 -59325938 + AluJb SINE Alu 1 296 -16 1948 100 0 14 chr10 80990830 80991111 -59325654 + AluY SINE Alu 2 278 -33 270 56 37 19 chr10 80991120 80991174 -59325591 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 1191 272 86 25 chr10 80991231 80991672 -59325093 - MLT1K LTR MaLR -11 577 110 221 317 17 0 chr10 80991781 80991841 -59324924 + L2 LINE L2 3247 3307 -6 283 286 22 11 chr10 80991928 80992019 -59324746 + MLT1L LTR MaLR 16 107 -508 324 197 16 0 chr10 80992056 80992117 -59324648 - MER5A DNA MER1_type -3 186 125 501 334 83 36 chr10 80992121 80992565 -59324200 - L2 LINE L2 -580 2734 2257 2374 118 28 6 chr10 80992565 80992920 -59323845 - THE1B LTR MaLR -1 363 1 501 334 83 36 chr10 80992920 80993032 -59323733 - L2 LINE L2 -1057 2257 2152 942 243 147 27 chr10 80993088 80993495 -59323270 - MLT1L LTR MaLR 0 615 160 647 203 158 0 chr10 80993500 80993658 -59323107 + MER5A DNA MER1_type 7 189 0 257 274 89 16 chr10 80994047 80994171 -59322594 + L2 LINE L2 3139 3271 -1 565 282 96 5 chr10 80994348 80994485 -59322280 + MIR SINE MIR 58 218 -44 2307 111 73 15 chr10 80994485 80994828 -59321937 + THE1B LTR MaLR 1 363 -1 565 282 96 5 chr10 80994828 80994878 -59321887 + MIR SINE MIR 218 262 0 203 306 48 107 chr10 80995166 80995372 -59321393 + L2 LINE L2 2972 3165 -107 274 283 63 54 chr10 80997724 80997905 -59318860 - MIR SINE MIR -58 150 19 359 299 16 95 chr10 80998032 80998336 -59318429 + L1ME4a LINE L1 5617 5896 -225 4455 189 36 8 chr10 80998431 81000020 -59316745 - L1MB7 LINE L1 0 6184 4549 183 352 65 9 chr10 81000271 81000379 -59316386 - L3b LINE CR1 -148 1435 1322 235 241 157 24 chr10 81001090 81001173 -59315592 + MIR SINE MIR 113 206 -56 318 269 0 0 chr10 81001761 81001906 -59314859 + (TG)n Simple_repeat Simple_repeat 2 146 0 202 315 14 0 chr10 81001917 81001990 -59314775 + (TG)n Simple_repeat Simple_repeat 2 75 0 360 265 45 139 chr10 81002178 81002487 -59314278 + L2 LINE L2 2993 3272 0 224 281 93 58 chr10 81002479 81002618 -59314147 + MIR SINE MIR 93 236 -26 * 320 366 23 0 chr10 81002685 81002816 -59313949 + MIR SINE MIR 21 154 -108 1367 250 61 70 chr10 81003112 81003768 -59312997 - MLT1E1 LTR MaLR -2 652 3 560 236 8 0 chr10 81003880 81004007 -59312758 - MER94 DNA DNA -1 133 6 335 301 28 56 chr10 81004205 81004348 -59312417 - MIR SINE MIR -70 192 54 380 179 81 81 chr10 81004642 81004765 -59312000 + L2 LINE L2 3191 3313 0 466 210 25 25 chr10 81005682 81005801 -59310964 + MIR SINE MIR 66 184 -78 184 100 50 0 chr10 81007296 81007336 -59309429 + C-rich Low_complexity Low_complexity 2 43 0 553 262 187 19 chr10 81007374 81007588 -59309177 + MIR SINE MIR 13 262 0 236 294 43 11 chr10 81007662 81007754 -59309011 + MIR SINE MIR 158 252 -10 222 250 42 62 chr10 81007769 81007865 -59308900 + L2 LINE L2 3155 3248 -24 1969 242 31 59 chr10 81007878 81008542 -59308223 + L1MC4 LINE L1 7269 7915 -127 212 59 29 0 chr10 81008542 81008576 -59308189 + (CA)n Simple_repeat Simple_repeat 2 36 0 1969 242 31 59 chr10 81008576 81008593 -59308172 + L1MC4 LINE L1 7915 7931 -111 1961 248 59 18 chr10 81008648 81008711 -59308054 - L1ME3A LINE L1 -219 5951 5892 657 69 0 0 chr10 81008711 81008798 -59307967 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1957 122 0 4 chr10 81008800 81009079 -59307686 - AluSx SINE Alu -34 278 1 1961 248 59 18 chr10 81009079 81009805 -59306960 - L1ME3A LINE L1 -278 5892 5124 248 333 64 21 chr10 81010281 81010422 -59306343 - L2 LINE L2 -216 3056 2910 181 294 20 0 chr10 81010467 81010518 -59306247 + MIR3 SINE MIR 115 166 -42 234 245 0 0 chr10 81011345 81011398 -59305367 + CT-rich Low_complexity Low_complexity 2 54 0 501 236 194 18 chr10 81011444 81011609 -59305156 - MER63A DNA MER1_type -5 205 12 312 313 124 0 chr10 81012668 81012800 -59303965 + MIR3 SINE MIR 46 191 -41 282 305 178 8 chr10 81013443 81013561 -59303204 - MIR SINE MIR -63 145 8 2080 110 0 0 chr10 81013774 81014066 -59302699 + AluSq SINE Alu 7 298 -15 234 73 36 55 chr10 81014953 81015008 -59301757 + (GGAGA)n Simple_repeat Simple_repeat 1 54 0 467 318 20 12 chr10 81015061 81015287 -59301478 + CT-rich Low_complexity Low_complexity 1 227 0 873 191 58 122 chr10 81016000 81016294 -59300471 - THE1C LTR MaLR 0 375 81 260 278 11 11 chr10 81016460 81016550 -59300215 + C-rich Low_complexity Low_complexity 6 95 0 1248 236 36 35 chr10 81016903 81017343 -59299422 + L1M4 LINE L1 4985 5430 -744 1911 82 0 0 chr10 81017343 81017581 -59299184 + L1PA7 LINE L1 5896 6140 -14 1248 236 36 35 chr10 81017581 81017720 -59299045 + L1M4 LINE L1 5430 5567 -607 363 302 43 17 chr10 81018747 81018863 -59297902 + L2 LINE L2 3189 3307 -6 485 198 99 112 chr10 81019026 81019329 -59297436 - MLT1C LTR MaLR -163 304 6 205 400 43 47 chr10 81019803 81020103 -59296662 - L2 LINE L2 0 3272 2974 229 314 158 10 chr10 81020208 81020511 -59296254 - L2 LINE L2 -434 2880 2533 270 0 0 0 chr10 81020989 81021019 -59295746 + (TG)n Simple_repeat Simple_repeat 2 31 0 425 245 76 60 chr10 81021682 81021866 -59294899 - LTR16C LTR ERVL -17 474 288 2166 93 3 3 chr10 81021967 81022269 -59294496 - AluSq SINE Alu -11 302 1 201 74 0 0 chr10 81022689 81022716 -59294049 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 462 293 128 21 chr10 81023324 81023512 -59293253 - LTR16C LTR ERVL 0 491 284 258 331 42 7 chr10 81023974 81024116 -59292649 - LTR67 LTR ERVL -3 554 408 2823 178 15 30 chr10 81024235 81024832 -59291933 + L1MB7 LINE L1 5592 6179 -5 305 312 110 41 chr10 81026445 81026663 -59290102 - MIR SINE MIR -6 256 24 255 381 31 0 chr10 81026682 81026779 -59289986 - MIR SINE MIR -56 206 107 243 223 304 18 chr10 81027228 81027340 -59289425 + MER5A DNA MER1_type 13 156 -33 1982 276 121 47 chr10 81027908 81029254 -59287511 - L1MEc LINE L1 -4898 1498 53 204 359 39 0 chr10 81029337 81029440 -59287325 - L3 LINE CR1 -125 1452 1346 1643 184 91 47 chr10 81030353 81030761 -59286004 + MSTB LTR MaLR 1 426 0 3621 212 59 12 chr10 81030795 81031781 -59284984 - L1ME1 LINE L1 -11 6155 5120 2340 84 0 10 chr10 81032010 81032321 -59284444 - AluSq SINE Alu -5 308 1 2226 184 29 5 chr10 81032361 81032775 -59283990 - MSTA LTR MaLR -4 424 1 489 306 49 99 chr10 81032802 81033247 -59283518 - L1ME1 LINE L1 -2509 3637 3215 244 216 128 112 chr10 81033374 81033499 -59283266 - MIR SINE MIR -64 144 18 232 288 82 0 chr10 81034152 81034225 -59282540 + L2 LINE L2 3017 3095 -177 406 244 233 0 chr10 81034286 81034458 -59282307 - L2 LINE L2 0 3313 3102 228 216 0 91 chr10 81034953 81035041 -59281724 + MIR3 SINE MIR 109 188 -20 360 315 171 23 chr10 81036419 81036635 -59280130 - MIR SINE MIR -6 256 9 1529 192 83 9 chr10 81036641 81036979 -59279786 - MLT1A1 LTR MaLR 0 365 3 180 298 0 0 chr10 81037427 81037474 -59279291 + L2 LINE L2 3266 3312 -1 318 324 19 19 chr10 81037739 81037847 -59278918 + MIR SINE MIR 45 152 -110 235 273 0 18 chr10 81038415 81038470 -59278295 + MIR SINE MIR 150 203 -59 183 326 133 20 chr10 81038473 81038571 -59278194 - MIR3 SINE MIR -98 110 2 562 311 107 0 chr10 81038932 81039128 -59277637 - MIR SINE MIR -44 218 2 1635 342 75 36 chr10 81039640 81040746 -59276019 - L3 LINE CR1 -29 1548 400 189 0 0 0 chr10 81040760 81040781 -59275984 + (CA)n Simple_repeat Simple_repeat 1 21 0 206 173 0 19 chr10 81040793 81040845 -59275920 + GA-rich Low_complexity Low_complexity 2 52 0 1742 156 7 3 chr10 81041443 81041738 -59275027 + AluJb SINE Alu 1 296 -16 1948 100 0 14 chr10 81041741 81042022 -59274743 + AluY SINE Alu 2 278 -33 270 56 37 19 chr10 81042032 81042086 -59274679 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 1191 272 86 25 chr10 81042143 81042584 -59274181 - MLT1K LTR MaLR -11 577 110 188 35 35 0 chr10 81042654 81042683 -59274082 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 221 317 17 0 chr10 81042697 81042757 -59274008 + L2 LINE L2 3247 3307 -6 283 286 22 11 chr10 81042844 81042935 -59273830 + MLT1L LTR MaLR 16 107 -508 324 197 16 0 chr10 81042972 81043033 -59273732 - MER5A DNA MER1_type -3 186 125 501 334 83 36 chr10 81043037 81043481 -59273284 - L2 LINE L2 -580 2734 2257 2374 118 28 6 chr10 81043481 81043836 -59272929 - THE1B LTR MaLR -1 363 1 501 334 83 36 chr10 81043836 81043948 -59272817 - L2 LINE L2 -1057 2257 2152 960 241 147 27 chr10 81044004 81044411 -59272354 - MLT1L LTR MaLR 0 615 160 647 203 158 0 chr10 81044416 81044574 -59272191 + MER5A DNA MER1_type 7 189 0 257 274 89 16 chr10 81044963 81045087 -59271678 + L2 LINE L2 3139 3271 -1 565 282 96 5 chr10 81045264 81045401 -59271364 + MIR SINE MIR 58 218 -44 2307 111 73 15 chr10 81045401 81045744 -59271021 + THE1B LTR MaLR 1 363 -1 565 282 96 5 chr10 81045744 81045794 -59270971 + MIR SINE MIR 218 262 0 203 306 48 107 chr10 81046082 81046288 -59270477 + L2 LINE L2 2972 3165 -107 5725 240 59 24 chr10 81048097 81050171 -59266594 + L1MC/D LINE L1 3319 5470 -758 240 107 0 71 chr10 81050221 81050277 -59266488 - LTR66 LTR ERVL -177 433 382 277 146 18 55 chr10 81050286 81050341 -59266424 + L1MD2 LINE L1 6057 6109 -250 1679 149 40 7 chr10 81050359 81050635 -59266130 - Tigger3(Golem) DNA MER2_type -8 3021 2737 7566 39 0 0 chr10 81050652 81051850 -59264915 + L1PA4 LINE L1 4999 6196 0 320 297 0 0 chr10 81051862 81051936 -59264829 + MLT1J LTR MaLR 105 178 -333 668 230 0 0 chr10 81051984 81052132 -59264633 + L1MA10 LINE L1 6187 6334 0 228 272 25 12 chr10 81052289 81052370 -59264395 + MLT1L LTR MaLR 519 600 -15 225 143 0 0 chr10 81052385 81052420 -59264345 + L2 LINE L2 3279 3313 0 743 191 12 40 chr10 81053818 81053991 -59262774 - MER5A DNA MER1_type -18 171 4 270 278 87 43 chr10 81054134 81054249 -59262516 + MIR SINE MIR 50 169 -93 212 316 0 0 chr10 81054306 81054363 -59262402 + MIR SINE MIR 42 98 -110 2738 95 36 5 chr10 81055307 81055695 -59261070 - L1PA11 LINE L1 -6 6168 5769 204 97 0 0 chr10 81055704 81055735 -59261030 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 30558 95 5 20 chr10 81055735 81061111 -59255654 - L1PA7 LINE L1 -11 6458 1162 784 83 0 0 chr10 81061109 81061205 -59255560 - L1PA7 LINE L1 -6365 96 1 * 3508 89 20 4 chr10 81061205 81061711 -59255054 - L1PA11 LINE L1 -379 5789 5276 431 223 32 11 chr10 81063662 81063756 -59253009 - MIR3 SINE MIR -4 204 109 380 179 81 81 chr10 81063816 81063939 -59252826 + L2 LINE L2 3191 3313 0 422 203 42 34 chr10 81064856 81064974 -59251791 + MIR SINE MIR 66 184 -78 1303 279 17 10 chr10 81066058 81066460 -59250305 - L1MC4 LINE L1 -369 7673 7269 222 250 42 62 chr10 81066473 81066569 -59250196 - L2 LINE L2 -24 3248 3155 236 294 43 11 chr10 81066584 81066676 -59250089 - MIR SINE MIR -10 252 158 425 257 196 28 chr10 81066750 81066964 -59249801 - MIR SINE MIR 0 262 13 1588 169 0 49 chr10 81068650 81068958 -59247807 - AluJb SINE Alu -12 300 8 527 264 16 8 chr10 81068964 81069089 -59247676 - MIR SINE MIR -112 150 25 677 201 22 76 chr10 81069182 81069366 -59247399 + MER5B DNA MER1_type 1 174 -4 1216 223 67 14 chr10 81069626 81069909 -59246856 - AluJo SINE Alu -2 300 3 411 288 48 20 chr10 81070286 81070432 -59246333 + MIR SINE MIR 15 164 -98 586 185 103 5 chr10 81070432 81070627 -59246138 + AluJo SINE Alu 85 298 -14 216 67 0 0 chr10 81070772 81070802 -59245963 + (TAA)n Simple_repeat Simple_repeat 2 31 0 305 265 12 0 chr10 81070835 81070918 -59245847 - L1MC/D LINE L1 -2290 5518 5435 364 272 56 31 chr10 81070919 81071081 -59245684 + L2 LINE L2 2641 2806 -508 805 164 0 8 chr10 81071221 81071355 -59245410 - FLAM_C SINE Alu 0 133 1 836 168 26 52 chr10 81071907 81072098 -59244667 - L1PA15 LINE L1 -201 5964 5779 2177 68 34 10 chr10 81072111 81072405 -59244360 - AluSq SINE Alu -12 301 1 336 183 56 0 chr10 81072406 81072477 -59244288 - MER5A DNA MER1_type -114 75 1 488 281 66 18 chr10 81072488 81072655 -59244110 - MIR SINE MIR -70 192 18 3181 14 0 0 chr10 81073054 81073418 -59243347 - L1P LINE L1 -1435 4711 4348 823 144 8 0 chr10 81074304 81074429 -59242336 - FLAM_C SINE Alu -7 126 1 302 203 72 27 chr10 81075568 81075695 -59241070 - MLT1G LTR MaLR -276 319 176 4622 26 0 0 chr10 81075695 81076223 -59240542 + L1PA4 LINE L1 5463 5990 -165 1461 223 129 17 chr10 81076370 81076596 -59240169 - MLT1D LTR MaLR -43 462 263 1576 173 3 54 chr10 81076596 81076909 -59239856 - AluJo SINE Alu -5 297 1 1461 223 129 17 chr10 81076909 81077094 -59239671 - MLT1D LTR MaLR -242 263 5 199 311 87 10 chr10 81077593 81077696 -59239069 + L2 LINE L2 3137 3247 -25 181 282 64 26 chr10 81078748 81078826 -59237939 - MIR SINE MIR -153 109 29 629 216 19 55 chr10 81079021 81079221 -59237544 + MLT1F LTR MaLR 375 542 0 662 283 98 78 chr10 81079895 81080394 -59236371 - MLT1H LTR MaLR -2 547 39 360 297 116 47 chr10 81080472 81080852 -59235913 + LTR33A LTR ERVL 71 476 -47 22 0 0 0 chr10 81081278 81081300 -59235465 + AT_rich Low_complexity Low_complexity 1 22 0 359 299 16 95 chr10 81081663 81081967 -59234798 + L1ME4a LINE L1 5617 5896 -225 4455 189 36 7 chr10 81082062 81083650 -59233115 - L1MB7 LINE L1 0 6184 4549 183 352 65 9 chr10 81083901 81084009 -59232756 - L3b LINE CR1 -148 1435 1322 235 241 157 24 chr10 81084720 81084803 -59231962 + MIR SINE MIR 113 206 -56 318 269 0 0 chr10 81085391 81085536 -59231229 + (TG)n Simple_repeat Simple_repeat 2 146 0 202 315 14 0 chr10 81085547 81085620 -59231145 + (TG)n Simple_repeat Simple_repeat 2 75 0 360 265 45 139 chr10 81085808 81086117 -59230648 + L2 LINE L2 2993 3272 0 224 281 93 58 chr10 81086109 81086248 -59230517 + MIR SINE MIR 93 236 -26 * 320 366 23 0 chr10 81086315 81086446 -59230319 + MIR SINE MIR 21 154 -108 1367 250 61 70 chr10 81086742 81087398 -59229367 - MLT1E1 LTR MaLR -2 652 3 560 236 8 0 chr10 81087510 81087637 -59229128 - MER94 DNA DNA -1 133 6 335 301 28 56 chr10 81087835 81087978 -59228787 - MIR SINE MIR -70 192 54 380 179 81 81 chr10 81088272 81088395 -59228370 + L2 LINE L2 3191 3313 0 466 210 25 25 chr10 81089312 81089431 -59227334 + MIR SINE MIR 66 184 -78 184 100 50 0 chr10 81090926 81090966 -59225799 + C-rich Low_complexity Low_complexity 2 43 0 553 262 187 19 chr10 81091004 81091218 -59225547 + MIR SINE MIR 13 262 0 236 294 43 11 chr10 81091292 81091384 -59225381 + MIR SINE MIR 158 252 -10 222 250 42 62 chr10 81091399 81091495 -59225270 + L2 LINE L2 3155 3248 -24 1969 242 31 59 chr10 81091508 81092172 -59224593 + L1MC4 LINE L1 7269 7915 -127 212 59 29 0 chr10 81092172 81092206 -59224559 + (CA)n Simple_repeat Simple_repeat 2 36 0 1969 242 31 59 chr10 81092206 81092223 -59224542 + L1MC4 LINE L1 7915 7931 -111 1961 248 59 18 chr10 81092278 81092341 -59224424 - L1ME3A LINE L1 -219 5951 5892 657 69 0 0 chr10 81092341 81092428 -59224337 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1957 122 0 4 chr10 81092430 81092709 -59224056 - AluSx SINE Alu -34 278 1 1961 248 59 18 chr10 81092709 81093435 -59223330 - L1ME3A LINE L1 -278 5892 5124 248 333 64 21 chr10 81093911 81094052 -59222713 - L2 LINE L2 -216 3056 2910 181 294 20 0 chr10 81094097 81094148 -59222617 + MIR3 SINE MIR 115 166 -42 234 245 0 0 chr10 81094975 81095028 -59221737 + CT-rich Low_complexity Low_complexity 2 54 0 501 236 194 18 chr10 81095074 81095239 -59221526 - MER63A DNA MER1_type -5 205 12 312 313 124 0 chr10 81096298 81096430 -59220335 + MIR3 SINE MIR 46 191 -41 282 305 178 8 chr10 81097073 81097191 -59219574 - MIR SINE MIR -63 145 8 2080 110 0 0 chr10 81097404 81097696 -59219069 + AluSq SINE Alu 7 298 -15 336 130 37 46 chr10 81098583 81098691 -59218074 + GA-rich Low_complexity Low_complexity 1 107 0 256 277 11 0 chr10 81099307 81099484 -59217281 + (CA)n Simple_repeat Simple_repeat 2 180 0 735 316 92 19 chr10 81100587 81101103 -59215662 + L2 LINE L2 2734 3287 -26 214 241 46 65 chr10 81101249 81101357 -59215408 - MIR SINE MIR -14 248 143 446 202 12 0 chr10 81101486 81101570 -59215195 - MIR SINE MIR -98 164 80 409 234 75 0 chr10 81101819 81101926 -59214839 + MIR SINE MIR 66 180 -82 231 200 146 0 chr10 81103155 81103210 -59213555 - MER103 DNA DNA -66 100 38 189 0 0 0 chr10 81103224 81103245 -59213520 + (TC)n Simple_repeat Simple_repeat 1 21 0 472 213 120 60 chr10 81103914 81104064 -59212701 - MIR SINE MIR -84 178 20 318 296 83 52 chr10 81104470 81104696 -59212069 + MIR SINE MIR 19 256 -6 45056 38 1 3 chr10 81104998 81111198 -59205567 + L1PA4 LINE L1 13 6196 0 300 311 0 0 chr10 81111210 81111284 -59205481 + MLT1J LTR MaLR 105 178 -333 668 230 0 0 chr10 81111332 81111480 -59205285 + L1MA10 LINE L1 6187 6334 0 228 272 25 12 chr10 81111637 81111718 -59205047 + MLT1L LTR MaLR 519 600 -15 225 143 0 0 chr10 81111733 81111768 -59204997 + L2 LINE L2 3279 3313 0 448 236 229 14 chr10 81113025 81113165 -59203600 + MER5B DNA MER1_type 2 171 -7 931 179 5 27 chr10 81113184 81113368 -59203397 - MER5A DNA MER1_type -6 183 4 270 278 87 43 chr10 81113511 81113626 -59203139 + MIR SINE MIR 50 169 -93 212 316 0 0 chr10 81113683 81113740 -59203025 + MIR SINE MIR 42 98 -110 2738 95 36 5 chr10 81114684 81115072 -59201693 - L1PA11 LINE L1 -6 6168 5769 204 97 0 0 chr10 81115081 81115112 -59201653 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 30566 95 5 20 chr10 81115112 81120493 -59196272 - L1PA7 LINE L1 -11 6458 1162 784 83 0 0 chr10 81120491 81120587 -59196178 - L1PA7 LINE L1 -6365 96 1 * 3508 89 20 4 chr10 81120587 81121093 -59195672 - L1PA11 LINE L1 -379 5789 5276 442 252 36 9 chr10 81123045 81123156 -59193609 - MIR3 SINE MIR -4 204 91 215 288 0 15 chr10 81124849 81124915 -59191850 - L2 LINE L2 0 3313 3249 228 86 0 0 chr10 81124947 81124982 -59191783 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 1905 129 4 0 chr10 81124982 81125261 -59191504 - AluSq SINE Alu -33 280 1 241 151 0 14 chr10 81125410 81125455 -59191310 + MIR SINE MIR 115 157 -105 227 303 66 57 chr10 81125627 81125749 -59191016 + MIR3 SINE MIR 81 203 -5 544 296 29 103 chr10 81126069 81126380 -59190385 - L2 LINE L2 0 3272 2985 495 234 62 14 chr10 81126948 81127093 -59189672 + MER103 DNA DNA 14 165 -1 2265 92 0 3 chr10 81127201 81127507 -59189258 + AluSg SINE Alu 1 305 -5 236 255 20 0 chr10 81127509 81127560 -59189205 - L3 LINE CR1 -24 1553 1502 220 301 70 70 chr10 81128130 81128273 -59188492 - MIR3 SINE MIR -59 149 7 223 269 161 0 chr10 81128859 81128952 -59187813 + MIR SINE MIR 84 191 -71 352 250 113 9 chr10 81129690 81129840 -59186925 - MIR3 SINE MIR -7 201 39 273 180 0 20 chr10 81130275 81130325 -59186440 - L2 LINE L2 -1 3271 3223 198 143 0 0 chr10 81130416 81130451 -59186314 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 180 219 0 0 chr10 81131774 81131806 -59184959 - L2 LINE L2 0 3272 3241 191 231 39 0 chr10 81131869 81131921 -59184844 + MIR3 SINE MIR 109 162 -46 665 285 26 42 chr10 81131941 81132253 -59184512 - MER102b DNA MER1_type -23 318 12 305 286 48 29 chr10 81132275 81132380 -59184385 + MER5A DNA MER1_type 3 109 -80 1489 212 16 49 chr10 81133837 81134223 -59182542 - MLT1A2 LTR MaLR -1 373 1 292 359 180 8 chr10 81134235 81134363 -59182402 + L2 LINE L2 3119 3268 -4 319 312 46 9 chr10 81134629 81134738 -59182027 + L2 LINE L2 3201 3313 0 574 279 25 12 chr10 81135149 81135310 -59181455 - MIR SINE MIR -32 230 68 262 170 340 0 chr10 81135310 81135363 -59181402 + MER81 DNA DNA 2 72 -42 301 319 43 9 chr10 81135544 81135660 -59181105 + L2 LINE L2 3193 3312 -1 855 249 133 43 chr10 81136087 81136508 -59180257 + MLT1J LTR MaLR 9 467 -44 206 374 35 17 chr10 81137617 81137732 -59179033 - L3b LINE CR1 -181 1402 1286 278 290 86 0 chr10 81137937 81138030 -59178735 + L2 LINE L2 3142 3242 -30 200 213 0 21 chr10 81138006 81138053 -59178712 + MIR SINE MIR 215 260 -2 * 3179 213 78 21 chr10 81138108 81139089 -59177676 + L1ME1 LINE L1 5123 6163 -3 1455 226 154 45 chr10 81140862 81141309 -59175456 + MLT1C LTR MaLR 9 466 -1 1198 159 48 5 chr10 81142175 81142383 -59174382 + MER20 DNA MER1_type 1 217 -2 1806 156 13 96 chr10 81142608 81143006 -59173759 + MLT1A1 LTR MaLR 1 365 0 216 97 0 0 chr10 81143482 81143513 -59173252 + (TA)n Simple_repeat Simple_repeat 1 31 0 1466 166 62 118 chr10 81143775 81144214 -59172551 + MLT2D LTR ERVL 1 414 0 459 269 267 35 chr10 81144596 81144967 -59171798 + L3 LINE CR1 1119 1575 -2 513 304 128 44 chr10 81145649 81146196 -59170569 + L3 LINE CR1 863 1455 -122 330 236 163 64 chr10 81146420 81146623 -59170142 - MLT1H LTR MaLR -195 354 132 301 277 20 40 chr10 81146932 81147033 -59169732 - MIR3 SINE MIR -29 179 81 318 234 16 0 chr10 81147899 81147963 -59168802 + L2 LINE L2 3205 3269 -3 1148 210 13 0 chr10 81148051 81148280 -59168485 + ERVL-C1 LTR ERVL 4397 4628 -1136 276 29 0 0 chr10 81148280 81148304 -59168461 + MADE1 DNA Mariner 1 24 -56 309 58 0 39 chr10 81148304 81148356 -59168409 - MADE1 DNA Mariner -3 77 28 4896 162 41 65 chr10 81148357 81149412 -59167353 + ERVL-C1 LTR ERVL 4724 5752 -12 1419 215 7 101 chr10 81149423 81149861 -59166904 + MLT2C1 LTR ERVL 1 397 0 562 224 97 24 chr10 81150444 81150609 -59166156 + MLT1H LTR MaLR 49 225 -324 260 280 14 91 chr10 81150694 81150868 -59165897 + MLT1H LTR MaLR 404 533 -16 570 306 0 33 chr10 81151055 81151238 -59165527 + MIR3 SINE MIR 15 191 -17 665 298 57 62 chr10 81152056 81152445 -59164320 - MLT1K LTR MaLR -12 576 190 199 295 0 33 chr10 81152687 81152748 -59164017 - MIR SINE MIR 0 262 204 325 292 29 58 chr10 81153589 81153662 -59163103 + L1ME4a LINE L1 5989 6058 -63 2263 97 0 7 chr10 81153662 81153961 -59162804 + AluSg SINE Alu 1 297 -13 325 292 29 58 chr10 81153961 81154024 -59162741 + L1ME4a LINE L1 6058 6121 0 289 284 81 27 chr10 81155327 81155475 -59161290 - MER96 DNA MER1_type? -11 164 9 285 295 63 31 chr10 81155514 81155661 -59161104 + MIR SINE MIR 17 168 -62 22 56 0 0 chr10 81156675 81156711 -59160054 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr10 81157421 81157444 -59159321 + AT_rich Low_complexity Low_complexity 1 23 0 232 336 99 23 chr10 81158632 81158763 -59158002 + MIR3 SINE MIR 43 183 -25 202 340 57 9 chr10 81159531 81159637 -59157128 + L2 LINE L2 2945 3055 -217 445 220 8 102 chr10 81159846 81159964 -59156801 - MIR3 SINE MIR -51 157 51 264 323 138 20 chr10 81159977 81160172 -59156593 - L3 LINE CR1 -50 1527 1310 270 0 0 0 chr10 81160192 81160222 -59156543 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 281 296 37 19 chr10 81160307 81160415 -59156350 + L2 LINE L2 3158 3267 -5 418 311 62 19 chr10 81160681 81160938 -59155827 - L2 LINE L2 -452 2862 2595 280 291 154 2 chr10 81161831 81161979 -59154786 + MIR SINE MIR 19 183 -62 266 167 17 0 chr10 81164002 81164062 -59152703 + CT-rich Low_complexity Low_complexity 3 63 0 400 228 0 25 chr10 81164084 81164167 -59152598 + CT-rich Low_complexity Low_complexity 1 80 -74 2564 142 33 21 chr10 81164167 81164589 -59152176 + MSTA LTR MaLR 2 428 0 400 228 0 25 chr10 81164589 81164663 -59152102 + CT-rich Low_complexity Low_complexity 80 154 0 257 288 62 0 chr10 81165589 81165669 -59151096 + MIR SINE MIR 46 130 -78 497 273 87 3 chr10 81166210 81166384 -59150381 + MIR SINE MIR 3 193 -69 3584 163 48 29 chr10 81166496 81167189 -59149576 + L1MB3 LINE L1 5282 5987 -196 2278 122 3 0 chr10 81167189 81167500 -59149265 + AluSq SINE Alu 2 313 0 3584 163 48 29 chr10 81167500 81167578 -59149187 + L1MB3 LINE L1 5987 6062 -121 511 294 68 0 chr10 81167947 81168110 -59148655 + MIR SINE MIR 22 195 -67 2299 111 3 0 chr10 81168955 81169252 -59147513 - AluSx SINE Alu -14 298 1 401 268 12 83 chr10 81169282 81169450 -59147315 - MIR SINE MIR -61 147 32 359 244 108 0 chr10 81169610 81169734 -59147031 + MIR SINE MIR 6 151 -64 345 305 170 30 chr10 81169799 81169999 -59146766 - MIR SINE MIR -19 243 16 270 280 51 42 chr10 81170000 81170118 -59146647 - MIR3 SINE MIR -11 197 79 337 295 40 27 chr10 81170584 81170733 -59146032 + MIR SINE MIR 77 227 -35 299 287 37 19 chr10 81171283 81171391 -59145374 + MIR SINE MIR 120 229 -33 205 248 185 13 chr10 81171446 81171603 -59145162 - L2 LINE L2 -204 3068 2885 191 267 67 0 chr10 81173367 81173427 -59143338 - MIR3 SINE MIR -26 182 119 293 224 15 30 chr10 81174044 81174111 -59142654 + C-rich Low_complexity Low_complexity 6 71 0 900 97 17 23 chr10 81174111 81174252 -59142513 + (TTCC)n Simple_repeat Simple_repeat 1 315 0 900 97 17 23 chr10 81174252 81174428 -59142337 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 217 282 13 26 chr10 81174677 81174755 -59142010 - L2 LINE L2 -24 3248 3172 313 236 48 33 chr10 81175635 81175735 -59141030 + MIR SINE MIR 71 172 -61 207 122 224 0 chr10 81176437 81176486 -59140279 - MIR SINE MIR -61 147 88 5471 246 58 22 chr10 81177761 81179834 -59136931 + L1MC/D LINE L1 3319 5470 -758 243 167 13 26 chr10 81179834 81179912 -59136853 + (TA)n Simple_repeat Simple_repeat 2 78 0 258 146 18 55 chr10 81179947 81180002 -59136763 + L1MD2 LINE L1 6057 6109 -250 6061 122 45 81 chr10 81180020 81180313 -59136452 - Tigger3b DNA MER2_type -1804 1224 922 7486 37 6 0 chr10 81180313 81181463 -59135302 + L1PA4 LINE L1 4999 6153 -2 6061 122 45 81 chr10 81181463 81182132 -59134633 - Tigger3b DNA MER2_type -2106 922 316 233 29 29 0 chr10 81182132 81182166 -59134599 + (TA)n Simple_repeat Simple_repeat 1 35 0 6061 122 45 81 chr10 81182166 81182459 -59134306 - Tigger3b DNA MER2_type -2712 316 14 302 260 40 0 chr10 81183502 81183602 -59133163 + MIR3 SINE MIR 77 180 -28 1582 211 82 18 chr10 81183774 81183947 -59132818 + MLT1C LTR MaLR 1 161 -306 2207 121 0 3 chr10 81183947 81184252 -59132513 + AluSx SINE Alu 1 304 -8 1582 211 82 18 chr10 81184252 81184515 -59132250 + MLT1C LTR MaLR 161 465 -2 397 289 18 9 chr10 81184519 81184633 -59132132 - L2 LINE L2 -3 3310 3196 237 310 0 0 chr10 81184750 81184808 -59131957 - L3 LINE CR1 0 1577 1520 329 340 7 48 chr10 81185350 81185497 -59131268 + MIR3 SINE MIR 3 143 -65 502 341 70 60 chr10 81186182 81186786 -59129979 + L2 LINE L2 2606 3268 -4 227 333 41 32 chr10 81187717 81187840 -59128925 + MIR3 SINE MIR 74 197 -11 347 374 47 0 chr10 81187940 81188111 -59128654 + MIR SINE MIR 25 203 -59 256 317 55 73 chr10 81188930 81189094 -59127671 + MIR SINE MIR 27 187 -75 314 301 98 16 chr10 81190185 81190308 -59126457 - MIR3 SINE MIR -62 146 14 1485 223 46 0 chr10 81190432 81190755 -59126010 - MLT1A1 LTR MaLR -4 361 24 231 184 0 0 chr10 81191064 81191102 -59125663 + MLT1L LTR MaLR 47 84 -531 333 320 156 14 chr10 81191149 81191514 -59125251 + MLT1L LTR MaLR 195 611 -4 214 330 85 8 chr10 81191612 81191730 -59125035 + L2 LINE L2 2928 3054 -218 302 303 80 62 chr10 81192647 81192809 -59123956 - L2 LINE L2 0 3272 3108 366 253 262 18 chr10 81192891 81193120 -59123645 - L2 LINE L2 -1 3312 3028 366 206 78 186 chr10 81193246 81193644 -59123121 - L2 LINE L2 -2 3311 2957 1665 159 58 33 chr10 81193644 81193840 -59122925 + MLT2B2 LTR ERVL 1 191 -324 1262 172 88 63 chr10 81193840 81194125 -59122640 + AluJo SINE Alu 1 292 -20 1665 159 58 33 chr10 81194125 81194385 -59122380 + MLT2B2 LTR ERVL 191 515 0 201 256 158 24 chr10 81194431 81194513 -59122252 + MIR SINE MIR 159 251 -11 21 0 0 0 chr10 81194581 81194602 -59122163 + AT_rich Low_complexity Low_complexity 1 21 0 267 355 9 9 chr10 81194709 81194816 -59121949 - MIR3 SINE MIR -15 193 87 1609 223 34 12 chr10 81194981 81195344 -59121421 + L1ME2 LINE L1 5483 5857 -307 360 0 0 0 chr10 81195344 81195384 -59121381 + (CA)n Simple_repeat Simple_repeat 2 41 0 1609 223 34 12 chr10 81195384 81195428 -59121337 + L1ME2 LINE L1 5857 5899 -265 335 342 7 26 chr10 81195474 81195626 -59121139 + LTR67 LTR ERVL 3 151 -406 1046 287 84 27 chr10 81196013 81196490 -59120275 + L2 LINE L2 2296 2799 -515 536 289 189 32 chr10 81196527 81197427 -59119338 + L1M3 LINE L1 3759 4799 -1347 1857 219 37 18 chr10 81197504 81197960 -59118805 - LTR40a LTR ERVL -54 465 1 343 333 55 37 chr10 81197983 81198473 -59118292 + L1M3 LINE L1 4877 5375 -771 246 321 95 24 chr10 81198491 81198743 -59118022 + L1M3 LINE L1 5412 5681 -490 269 308 75 95 chr10 81198784 81199089 -59117676 + L2 LINE L2 2974 3272 0 324 317 49 14 chr10 81200039 81200181 -59116584 + MIR3 SINE MIR 35 181 -27 521 290 67 42 chr10 81200199 81200437 -59116328 + MIR SINE MIR 19 262 0 1233 302 39 29 chr10 81200470 81200983 -59115782 + MLT1E LTR MaLR 18 535 -58 470 230 267 0 chr10 81201204 81201365 -59115400 - MER63B DNA MER1_type -232 204 1 312 257 138 28 chr10 81201565 81201674 -59115091 + MIR SINE MIR 122 242 -20 383 321 9 9 chr10 81202018 81202124 -59114641 + L2 LINE L2 3166 3271 -1 185 216 0 135 chr10 81202138 81202212 -59114553 - MIR3 SINE MIR -25 183 120 207 294 40 87 chr10 81203211 81203337 -59113428 + L2 LINE L2 2896 3015 -257 393 102 0 0 chr10 81203376 81203435 -59113330 + (TG)n Simple_repeat Simple_repeat 2 60 0 610 199 178 0 chr10 81203632 81203778 -59112987 + MER96 DNA MER1_type 1 172 -3 206 378 61 0 chr10 81203869 81203967 -59112798 + MIR SINE MIR 26 129 -133 661 249 87 31 chr10 81206307 81206536 -59110229 + MIR SINE MIR 19 260 -2 225 319 77 0 chr10 81206609 81206700 -59110065 + L2 LINE L2 3172 3269 -3 186 43 0 0 chr10 81207173 81207196 -59109569 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 317 320 20 10 chr10 81208313 81208413 -59108352 + MIR SINE MIR 125 225 -37 261 311 139 7 chr10 81208477 81208628 -59108137 - MIR SINE MIR -50 212 42 1742 168 57 30 chr10 81209566 81209900 -59106865 - MER61A LTR ERV1 0 343 1 196 333 19 46 chr10 81210432 81210540 -59106225 - MIR SINE MIR -74 134 30 1714 143 109 3 chr10 81210750 81211072 -59105693 - MER46B DNA MER2_type -5 231 1 299 200 31 31 chr10 81211836 81211901 -59104864 + MIR SINE MIR 41 105 -103 184 283 0 22 chr10 81212047 81212093 -59104672 - MIR SINE MIR -8 254 210 235 233 192 14 chr10 81212542 81212615 -59104150 + L2 LINE L2 3209 3294 -19 186 281 110 37 chr10 81213365 81213447 -59103318 - L2 LINE L2 -18 3254 3167 245 293 49 12 chr10 81213474 81213556 -59103209 - MIR SINE MIR -16 246 162 294 313 43 43 chr10 81214018 81214226 -59102539 + L2 LINE L2 2870 3077 -195 1280 245 65 21 chr10 81214237 81214665 -59102100 - MLT1C LTR MaLR -16 451 5 189 297 55 33 chr10 81214750 81214841 -59101924 + L2 LINE L2 3161 3253 -19 199 356 76 15 chr10 81215983 81216115 -59100650 + MIR SINE MIR 64 203 -59 425 264 45 17 chr10 81216160 81216341 -59100424 - MIR SINE MIR -42 220 35 451 319 94 55 chr10 81216477 81216827 -59099938 - L2 LINE L2 -111 3161 2826 204 40 0 0 chr10 81216827 81216852 -59099913 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 451 319 94 55 chr10 81216852 81217402 -59099363 - L2 LINE L2 -446 2826 2213 398 301 26 52 chr10 81217989 81218142 -59098623 + L2 LINE L2 3165 3313 0 203 284 49 25 chr10 81218386 81218467 -59098298 - L2 LINE L2 -52 3220 3138 222 350 36 36 chr10 81218529 81218669 -59098096 - L2 LINE L2 -480 2834 2695 697 226 6 18 chr10 81218747 81218915 -59097850 - MER63A DNA MER1_type 0 210 45 262 304 0 22 chr10 81220111 81220203 -59096562 + CT-rich Low_complexity Low_complexity 2 91 0 373 315 28 21 chr10 81220432 81220575 -59096190 - MIR3 SINE MIR -29 179 36 281 298 35 57 chr10 81221034 81221175 -59095590 + MIR3 SINE MIR 44 181 -27 427 295 115 11 chr10 81221927 81222110 -59094655 + MIR SINE MIR 50 251 -11 769 230 86 79 chr10 81222119 81222536 -59094229 - MLT1H LTR MaLR 0 549 130 183 271 0 0 chr10 81222673 81222721 -59094044 + L2 LINE L2 3223 3270 -2 1300 249 84 11 chr10 81223588 81223969 -59092796 - MLT1I LTR MaLR 0 409 1 280 350 24 24 chr10 81224434 81224557 -59092208 + MIR SINE MIR 42 164 -98 439 303 57 57 chr10 81224671 81224935 -59091830 + L3 LINE CR1 1271 1534 -43 257 277 81 0 chr10 81226278 81226378 -59090387 - MIR SINE MIR -60 148 69 214 247 131 38 chr10 81226454 81226587 -59090178 + MER5B DNA MER1_type 50 173 -5 364 236 75 28 chr10 81226747 81226853 -59089912 + MIR SINE MIR 35 145 -63 671 246 77 11 chr10 81227063 81227246 -59089519 - MIR SINE MIR -37 225 31 298 332 43 43 chr10 81227913 81228100 -59088665 + MIR3 SINE MIR 20 206 -2 221 316 105 13 chr10 81228100 81228176 -59088589 + MIR SINE MIR 22 104 -104 286 303 50 25 chr10 81228723 81228842 -59087923 - MIR SINE MIR -128 134 13 722 188 146 6 chr10 81228845 81229010 -59087755 - MER5A DNA MER1_type -1 188 1 782 185 53 0 chr10 81229314 81229465 -59087300 + MLT1F1 LTR MaLR 105 263 -304 1943 193 48 0 chr10 81230491 81230870 -59085895 - MLT1F1 LTR MaLR -170 397 1 229 222 12 49 chr10 81231484 81231565 -59085200 + L1 LINE L1 2136 2213 -3933 694 220 99 0 chr10 81232244 81232435 -59084330 - L2 LINE L2 -2 3311 3102 846 209 52 5 chr10 81232793 81232984 -59083781 + MER3 DNA MER1_type 1 200 -9 386 156 39 13 chr10 81233096 81233173 -59083592 + MIR SINE MIR 87 165 -97 330 67 0 0 chr10 81233304 81233349 -59083416 + (TG)n Simple_repeat Simple_repeat 2 46 0 2472 127 86 10 chr10 81233349 81233744 -59083021 - MSTA LTR MaLR -3 425 1 249 139 0 0 chr10 81233744 81233787 -59082978 + (TG)n Simple_repeat Simple_repeat 1 43 0 469 293 100 0 chr10 81233787 81234046 -59082719 + L1ME4a LINE L1 5584 5868 -253 438 274 24 30 chr10 81234057 81234225 -59082540 + L1ME4a LINE L1 5947 6113 -8 201 279 0 33 chr10 81236072 81236133 -59080632 + MIR3 SINE MIR 106 164 -44 197 237 17 34 chr10 81236146 81236205 -59080560 - MIR SINE MIR -97 111 54 477 259 132 33 chr10 81236898 81237110 -59079655 + MIR SINE MIR 28 260 -2 261 233 103 78 chr10 81237157 81237273 -59079492 - MER5A DNA MER1_type -26 163 45 939 241 57 68 chr10 81237433 81237769 -59078996 - MER46C DNA MER2_type 0 338 7 520 317 21 20 chr10 81237777 81237985 -59078780 - MIR SINE MIR -48 214 3 251 250 45 62 chr10 81238388 81238500 -59078265 + MIR SINE MIR 6 115 -147 641 194 0 22 chr10 81238948 81239128 -59077637 + CT-rich Low_complexity Low_complexity 1 176 0 661 329 43 92 chr10 81239165 81239655 -59077110 - L2 LINE L2 -2 3270 2805 348 299 33 60 chr10 81240158 81240342 -59076423 - MIR3 SINE MIR -11 197 19 567 228 186 0 chr10 81240370 81240515 -59076250 - MER5A DNA MER1_type 0 189 18 240 346 19 19 chr10 81241040 81241144 -59075621 + MIR3 SINE MIR 99 202 -6 21 0 0 0 chr10 81241746 81241767 -59074998 + AT_rich Low_complexity Low_complexity 1 21 0 1335 209 89 9 chr10 81242179 81242495 -59074270 + MLT1A1 LTR MaLR 1 341 -24 332 291 50 35 chr10 81242939 81243080 -59073685 + MIR3 SINE MIR 25 167 -41 191 319 0 59 chr10 81243830 81243949 -59072816 + MIR SINE MIR 20 131 -77 1295 224 151 33 chr10 81246287 81246770 -59069995 + MLT1F LTR MaLR 3 542 0 466 277 84 6 chr10 81246830 81246996 -59069769 + MIR SINE MIR 70 248 -14 219 339 77 59 chr10 81247034 81247255 -59069510 + L2 LINE L2 2872 3096 -176 608 343 19 23 chr10 81249434 81249650 -59067115 + MIR SINE MIR 20 234 -28 300 287 46 0 chr10 81249650 81249737 -59067028 + MER91A DNA MER1_type 5 95 -101 322 350 55 25 chr10 81249915 81250115 -59066650 - L3 LINE CR1 -81 1496 1291 255 335 63 52 chr10 81250274 81250465 -59066300 - MLT1I LTR MaLR -146 263 71 196 318 0 0 chr10 81250571 81250634 -59066131 + MIR SINE MIR 82 144 -64 359 220 80 30 chr10 81251625 81251725 -59065040 - L2 LINE L2 -1 3312 3208 260 333 14 0 chr10 81251792 81251861 -59064904 - MIR SINE MIR -105 103 34 782 279 47 25 chr10 81252245 81252619 -59064146 + L1MC/D LINE L1 5198 5598 -566 192 311 52 82 chr10 81252668 81252803 -59063962 - L2 LINE L2 -25 3247 3117 417 228 129 29 chr10 81252823 81253005 -59063760 - MIR SINE MIR -50 212 10 541 316 68 29 chr10 81253151 81253357 -59063408 + MIR SINE MIR 45 258 -4 225 196 0 0 chr10 81253364 81253415 -59063350 + GA-rich Low_complexity Low_complexity 2 52 0 192 125 0 0 chr10 81254616 81254648 -59062117 + (TC)n Simple_repeat Simple_repeat 1 32 0 905 210 40 20 chr10 81255542 81255658 -59061107 - MER20 DNA MER1_type 0 219 96 2199 137 15 12 chr10 81255658 81255994 -59060771 + MER1B DNA MER1_type 1 337 0 905 210 40 20 chr10 81255994 81256077 -59060688 - MER20 DNA MER1_type -123 96 16 313 341 62 0 chr10 81256882 81257011 -59059754 + MIR3 SINE MIR 24 160 -48 341 342 82 13 chr10 81257254 81257412 -59059353 + MIR SINE MIR 21 189 -73 189 0 0 0 chr10 81257616 81257637 -59059128 + (CA)n Simple_repeat Simple_repeat 2 22 0 212 196 0 39 chr10 81257706 81257757 -59059008 + (CATA)n Simple_repeat Simple_repeat 2 50 0 224 211 197 0 chr10 81257800 81257876 -59058889 + MIR SINE MIR 63 153 -109 400 151 81 0 chr10 81258952 81259038 -59057727 + L1MB3 LINE L1 5702 5794 -386 * 681 146 17 0 chr10 81259035 81259159 -59057606 - L1MB2 LINE L1 -222 5949 5813 318 82 0 0 chr10 81259185 81259234 -59057531 - Alu SINE Alu 0 302 254 1706 156 7 10 chr10 81259261 81259562 -59057203 + AluJo SINE Alu 12 311 -1 2015 163 36 6 chr10 81259588 81259945 -59056820 + L1MB3 LINE L1 5814 6181 -2 5539 211 49 26 chr10 81260078 81260541 -59056224 + Charlie1a DNA MER1_type 1 452 -2309 1955 123 0 33 chr10 81260541 81260843 -59055922 - AluSx SINE Alu -18 294 3 5539 211 49 26 chr10 81260843 81261801 -59054964 + Charlie1a DNA MER1_type 452 1455 0 219 146 0 0 chr10 81261837 81261878 -59054887 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 1180 180 15 0 chr10 81262291 81262491 -59054274 - MER58A DNA MER1_type 0 224 22 184 370 34 0 chr10 81262758 81262877 -59053888 - MIR SINE MIR -107 155 33 576 272 56 61 chr10 81263315 81263722 -59053043 + L1M3 LINE L1 5266 5688 -476 552 311 111 57 chr10 81263723 81264235 -59052530 - L3 LINE CR1 -576 1001 462 2212 101 16 0 chr10 81264245 81264580 -59052185 + AluSq SINE Alu 1 340 0 220 69 0 0 chr10 81264551 81264762 -59052003 + (GAAA)n Simple_repeat Simple_repeat 1 211 0 326 278 95 47 chr10 81265011 81265180 -59051585 + MIR SINE MIR 16 192 -70 194 229 60 48 chr10 81265483 81265566 -59051199 - MIR SINE MIR -69 139 56 2246 72 7 3 chr10 81265682 81265973 -59050792 + AluY SINE Alu 1 292 -19 210 237 17 34 chr10 81266185 81266244 -59050521 + L2 LINE L2 2429 2486 -828 185 244 167 13 chr10 81266353 81266431 -59050334 - MIR SINE MIR -83 125 36 482 291 14 0 chr10 81267352 81267500 -59049265 + L1ME4a LINE L1 5759 5908 -213 259 196 106 85 chr10 81267688 81267877 -59048888 + L1ME4a LINE L1 5928 6120 -1 514 337 15 0 chr10 81268564 81268769 -59047996 + L2 LINE L2 2460 2667 -647 324 307 116 40 chr10 81268763 81269040 -59047725 + L2 LINE L2 3015 3312 -1 * 308 347 80 5 chr10 81271563 81271771 -59044994 + MIR SINE MIR 37 261 -1 393 239 58 72 chr10 81271961 81272099 -59044666 + MLT1J2 LTR MaLR 267 402 -48 216 271 167 0 chr10 81272638 81272734 -59044031 - MIR3 SINE MIR -4 204 93 329 307 230 4 chr10 81273182 81273452 -59043313 - L3 LINE CR1 -96 1481 1151 325 220 99 0 chr10 81273463 81273554 -59043211 + MER5A DNA MER1_type 4 103 -86 1238 188 87 18 chr10 81273577 81273890 -59042875 + AluJo SINE Alu 1 332 0 189 314 43 81 chr10 81274080 81274290 -59042475 - L3 LINE CR1 -650 927 726 * 486 261 33 72 chr10 81274249 81274429 -59042336 + MER5B DNA MER1_type 6 178 0 537 250 0 0 chr10 81274707 81274819 -59041946 - MER81 DNA DNA 0 114 3 276 220 114 76 chr10 81274839 81274971 -59041794 - MLT1H LTR MaLR -243 306 170 198 339 46 18 chr10 81275527 81275636 -59041129 - L3 LINE CR1 -770 807 696 219 268 29 29 chr10 81276432 81276509 -59040256 + MIR SINE MIR 46 123 -85 401 298 12 18 chr10 81277096 81277264 -59039501 + CT-rich Low_complexity Low_complexity 2 168 0 1931 180 30 22 chr10 81277337 81277699 -59039066 + MLT1A1 LTR MaLR 1 365 0 198 297 65 29 chr10 81277896 81278034 -59038731 - L2 LINE L2 -10 3303 3161 270 221 93 23 chr10 81278829 81278915 -59037850 - MIR SINE MIR -55 153 62 188 161 0 0 chr10 81279177 81279208 -59037557 - MIR SINE MIR -69 139 109 222 228 53 0 chr10 81279345 81279402 -59037363 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 439 277 131 61 chr10 81279863 81280192 -59036573 - L2 LINE L2 -49 3223 2872 2949 232 33 25 chr10 81281078 81281846 -59034919 - L1ME1 LINE L1 -15 6151 5378 255 341 24 0 chr10 81281855 81281937 -59034828 + MIR SINE MIR 58 141 -67 285 313 49 28 chr10 81282100 81282244 -59034521 + L2 LINE L2 2612 2758 -556 428 231 19 29 chr10 81282259 81282363 -59034402 - L2 LINE L2 -1 3271 3169 457 223 54 54 chr10 81282367 81282515 -59034250 - MIR3 SINE MIR -55 153 6 239 308 44 6 chr10 81283211 81283370 -59033395 - LTR67 LTR ERVL -2 555 391 403 257 66 40 chr10 81283785 81283937 -59032828 + MIR SINE MIR 3 158 -104 1376 167 0 14 chr10 81284077 81284298 -59032467 - MER20 DNA MER1_type -1 218 1 247 293 91 70 chr10 81284977 81285318 -59031447 + L1MC/D LINE L1 565 912 -5722 324 281 19 41 chr10 81285657 81285875 -59030890 + L1MC/D LINE L1 1468 1724 -4862 26 30 0 0 chr10 81285936 81285969 -59030796 + AT_rich Low_complexity Low_complexity 1 33 0 1572 48 87 0 chr10 81286452 81286660 -59030105 - L1PA4 LINE L1 0 6155 5930 808 324 35 37 chr10 81286932 81287197 -59029568 + L1ME1 LINE L1 5340 5604 -562 1715 104 0 0 chr10 81287197 81287427 -59029338 - AluSg SINE Alu -53 257 28 808 324 35 37 chr10 81287427 81287440 -59029325 + L1ME1 LINE L1 5604 5616 -550 2354 136 27 11 chr10 81287440 81287808 -59028957 + THE1C LTR MaLR 2 375 0 808 324 35 37 chr10 81287808 81288096 -59028669 + L1ME1 LINE L1 5616 5906 -260 33 0 0 0 chr10 81288104 81288137 -59028628 + AT_rich Low_complexity Low_complexity 1 33 0 2081 191 65 25 chr10 81288210 81288300 -59028465 + L1M4 LINE L1 4021 4106 -2040 1779 128 11 4 chr10 81288300 81288573 -59028192 + AluSx SINE Alu 1 275 -37 244 48 48 0 chr10 81288576 81288618 -59028147 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 2081 191 65 25 chr10 81288618 81289048 -59027717 + L1M4 LINE L1 4107 4566 -1580 515 149 21 64 chr10 81289048 81289189 -59027576 + L1MB7 LINE L1 6049 6183 -1 265 313 107 5 chr10 81289510 81289734 -59027031 + L1MC/D LINE L1 3463 3709 -2935 399 281 169 43 chr10 81289763 81289994 -59026771 + L1MC/D LINE L1 3662 3921 -2723 4509 160 57 18 chr10 81290151 81291031 -59025734 - L1MD1 LINE L1 0 6636 5723 6037 226 67 48 chr10 81291059 81291873 -59024892 - L1MD1 LINE L1 -1623 4917 4120 2000 129 0 3 chr10 81291873 81292167 -59024598 - AluSx SINE Alu -14 298 6 6037 226 67 48 chr10 81292167 81292388 -59024377 - L1MD1 LINE L1 -2420 4120 3905 1915 112 0 28 chr10 81292388 81292742 -59024023 - AluSx SINE Alu 0 351 6 6037 226 67 48 chr10 81292742 81296551 -59020214 - L1MD1 LINE L1 -2635 3905 21 650 268 18 31 chr10 81296573 81296801 -59019964 - L1ME3A LINE L1 -7 6163 5939 2292 220 67 29 chr10 81296978 81297610 -59019155 - MER21B LTR ERV1 -71 792 137 643 192 293 0 chr10 81297614 81297843 -59018922 - L1MC4 LINE L1 -953 7089 6794 2147 179 38 42 chr10 81297845 81298343 -59018422 + MLT1D LTR MaLR 3 498 -7 709 230 8 113 chr10 81298366 81298623 -59018142 - L1MC4a LINE L1 -1096 6712 6483 485 322 96 46 chr10 81298761 81299177 -59017588 + L1MC/D LINE L1 5112 5548 -1096 296 164 33 0 chr10 81299192 81299253 -59017512 - MADE1 DNA Mariner 0 80 18 387 303 153 11 chr10 81299386 81299759 -59017006 + L1MC/D LINE L1 5857 6282 -2024 524 320 200 30 chr10 81300205 81300770 -59015995 - L1MC4a LINE L1 -1855 5953 5293 563 294 68 53 chr10 81300822 81301705 -59015060 - L1MC4a LINE L1 -943 5203 4308 1896 182 22 25 chr10 81301910 81302109 -59014656 + Tigger2a DNA MER2_type 1 199 -2509 2070 133 0 31 chr10 81302109 81302426 -59014339 - AluSx SINE Alu -5 307 1 1896 182 22 25 chr10 81302426 81302632 -59014133 + Tigger2a DNA MER2_type 199 405 -29 206 216 0 0 chr10 81302673 81302710 -59014055 + polypurine Low_complexity Low_complexity 2 38 0 2406 71 3 3 chr10 81302805 81303101 -59013664 + AluY SINE Alu 1 296 -15 431 238 20 82 chr10 81303674 81303980 -59012785 + MLT1I LTR MaLR 67 347 -62 4607 226 29 60 chr10 81304192 81305775 -59010990 + L1M4 LINE L1 2844 4377 -1769 475 225 63 0 chr10 81306055 81306166 -59010599 - L2 LINE L2 -1356 1958 1841 * 585 217 14 101 chr10 81306160 81306367 -59010398 + L2 LINE L2 2120 2308 -1006 563 278 61 48 chr10 81306377 81306672 -59010093 + L2 LINE L2 2554 2852 -462 226 224 0 0 chr10 81306662 81306711 -59010054 + L2 LINE L2 3265 3313 0 * 959 287 8 24 chr10 81307564 81307818 -59008947 + MIR SINE MIR 1 250 -12 358 293 95 0 chr10 81307990 81308106 -59008659 + MIR3 SINE MIR 65 191 -17 486 296 157 6 chr10 81308296 81308455 -59008310 - MER5A DNA MER1_type -3 186 4 944 219 5 0 chr10 81308707 81308903 -59007862 + MER3 DNA MER1_type 1 197 -12 253 216 159 11 chr10 81309388 81309476 -59007289 - MIR SINE MIR -92 116 16 443 347 36 18 chr10 81309509 81309728 -59007037 - MIR SINE MIR -13 249 27 310 284 182 13 chr10 81309909 81310256 -59006509 - L2 LINE L2 -300 3013 2607 419 328 95 27 chr10 81312201 81312497 -59004268 - L3 LINE CR1 -84 1493 1178 2073 121 34 7 chr10 81312970 81313268 -59003497 - AluSx SINE Alu -6 306 1 1902 245 58 25 chr10 81313534 81314138 -59002627 + L1ME3A LINE L1 5546 6169 -1 219 185 0 19 chr10 81314613 81314667 -59002098 + (TTA)n Simple_repeat Simple_repeat 3 55 0 216 158 0 0 chr10 81315476 81315514 -59001251 + GA-rich Low_complexity Low_complexity 3 40 0 408 351 90 24 chr10 81315655 81315866 -59000899 - MIR SINE MIR -10 252 28 270 293 113 60 chr10 81316010 81316310 -59000455 + L2 LINE L2 2905 3220 -52 266 253 115 58 chr10 81316410 81316584 -59000181 - MIR3 SINE MIR -1 207 24 381 314 7 15 chr10 81316950 81317087 -58999678 - MIR SINE MIR -106 156 21 248 125 0 125 chr10 81317146 81317210 -58999555 + MIR SINE MIR 107 162 -100 379 277 115 0 chr10 81317548 81317678 -58999087 + MER103 DNA DNA 20 164 -2 207 0 0 0 chr10 81317875 81317898 -58998867 + (TCTCCC)n Simple_repeat Simple_repeat 6 28 0 508 30 0 100 chr10 81317901 81318001 -58998764 + SVA Other Other 1 90 -1296 21 0 0 0 chr10 81318252 81318273 -58998492 + GC_rich Low_complexity Low_complexity 1 21 0 6901 64 18 43 chr10 81318540 81320379 -58996386 + SVA Other Other 1 1386 0 1499 253 68 52 chr10 81320525 81321099 -58995666 + MLT1K LTR MaLR 4 586 -2 291 180 0 0 chr10 81321231 81321281 -58995484 + MER91B DNA MER1_type 2 51 -139 380 339 0 19 chr10 81321487 81321635 -58995130 + MIR SINE MIR 16 159 -63 2623 66 0 0 chr10 81321651 81321956 -58994809 - AluY SINE Alu -5 306 2 231 297 0 0 chr10 81321958 81322022 -58994743 + L2 LINE L2 2992 3055 -217 414 311 30 18 chr10 81323735 81323899 -58992866 + L2 LINE L2 1513 1678 -1636 1146 199 37 12 chr10 81323901 81324142 -58992623 + MIR SINE MIR 6 252 -10 * 1437 265 59 59 chr10 81324127 81324639 -58992126 + L2 LINE L2 1664 2178 -1136 1491 181 28 16 chr10 81324639 81324959 -58991806 - MER33 DNA MER1_type 0 324 1 1437 265 59 59 chr10 81324959 81325076 -58991689 + L2 LINE L2 2177 2293 -1021 703 310 47 18 chr10 81325101 81325714 -58991051 - L2 LINE L2 -211 3102 2395 417 210 49 21 chr10 81325801 81325944 -58990821 + LTR16A LTR ERVL 304 450 0 267 247 26 0 chr10 81328066 81328143 -58988622 - L1MC4 LINE L1 -1350 6692 6614 182 264 221 29 chr10 81328539 81328679 -58988086 + MIR SINE MIR 31 197 -65 230 336 52 43 chr10 81328706 81328822 -58987943 - MIR SINE MIR -75 133 17 25 0 0 0 chr10 81329315 81329340 -58987425 + AT_rich Low_complexity Low_complexity 1 25 0 294 275 55 46 chr10 81330304 81330413 -58986352 - MIR SINE MIR -132 130 21 851 236 108 71 chr10 81331329 81331617 -58985148 - MLT1C LTR MaLR 0 467 156 2303 116 0 0 chr10 81331617 81331927 -58984838 - AluSg SINE Alu 0 310 1 851 236 108 71 chr10 81331927 81332075 -58984690 - MLT1C LTR MaLR -311 156 15 325 299 71 7 chr10 81333665 81333819 -58982946 - MER103 DNA DNA 0 166 3 180 198 49 99 chr10 81335866 81335947 -58980818 + MIR SINE MIR 178 254 -8 283 290 105 31 chr10 81336256 81336418 -58980347 - MIR3 SINE MIR -15 193 20 236 277 75 11 chr10 81336797 81336891 -58979874 - L2 LINE L2 -20 3252 3153 370 200 70 0 chr10 81337533 81337633 -58979132 + L1ME3A LINE L1 5792 5898 -272 593 250 0 0 chr10 81337647 81337783 -58978982 + L1ME3A LINE L1 6030 6165 -5 303 173 29 35 chr10 81338172 81338256 -58978509 - MIR SINE MIR -57 151 87 400 285 19 6 chr10 81338862 81339020 -58977745 + (TTCA)n Simple_repeat Simple_repeat 3 162 0 674 252 35 83 chr10 81339035 81339349 -58977416 + MLT1I LTR MaLR 1 299 -110 948 290 39 44 chr10 81339355 81339813 -58976952 + LTR16B LTR ERVL 8 463 -1 324 0 0 0 chr10 81340768 81340804 -58975961 + (CA)n Simple_repeat Simple_repeat 2 37 0 413 294 0 0 chr10 81341160 81341262 -58975503 + MIR SINE MIR 84 185 -77 358 210 43 56 chr10 81341323 81341485 -58975280 + L1ME4a LINE L1 5961 6120 -1 368 299 73 0 chr10 81341640 81341777 -58974988 - MIR3 SINE MIR -42 166 20 233 143 0 20 chr10 81342146 81342195 -58974570 + (TCC)n Simple_repeat Simple_repeat 2 49 0 1695 185 107 0 chr10 81342949 81343115 -58973650 + MLT1B LTR MaLR 1 148 -242 2044 137 7 0 chr10 81343115 81343407 -58973358 + AluSq SINE Alu 1 294 -19 1695 185 107 0 chr10 81343407 81343586 -58973179 + MLT1B LTR MaLR 148 383 -7 967 215 57 23 chr10 81343616 81343881 -58972884 + ORSL DNA AcHobo 2 275 0 2282 110 0 3 chr10 81345509 81345809 -58970956 + AluSg SINE Alu 1 299 -11 279 278 114 28 chr10 81346002 81346178 -58970587 - MLT1L LTR MaLR 0 615 425 286 323 10 10 chr10 81346290 81346386 -58970379 - MLT1L LTR MaLR -328 287 192 1377 220 51 46 chr10 81346415 81346538 -58970227 + MER119 DNA MER1_type 8 129 -454 2103 131 7 7 chr10 81346538 81346843 -58969922 - AluSc SINE Alu -4 305 1 1377 220 51 46 chr10 81346843 81347092 -58969673 + MER119 DNA MER1_type 129 382 -201 997 152 40 0 chr10 81347092 81347290 -58969475 + L1MA8 LINE L1 6065 6270 -21 24 32 0 0 chr10 81347339 81347370 -58969395 + AT_rich Low_complexity Low_complexity 1 31 0 764 193 46 61 chr10 81347377 81347574 -58969191 + MER119 DNA MER1_type 389 582 -1 2210 131 103 28 chr10 81347725 81348054 -58968711 + MSTA LTR MaLR 1 366 -62 2047 107 16 66 chr10 81348054 81348373 -58968392 + AluSx SINE Alu 1 303 -9 2210 131 103 28 chr10 81348373 81348439 -58968326 + MSTA LTR MaLR 366 426 -2 215 333 40 47 chr10 81349097 81349247 -58967518 + L2 LINE L2 3122 3270 -2 * 285 298 58 8 chr10 81349244 81349365 -58967400 - MIR SINE MIR -76 186 60 267 279 29 50 chr10 81349531 81349671 -58967094 + MIR3 SINE MIR 23 159 -49 339 260 40 10 chr10 81349901 81350001 -58966764 - MIR SINE MIR -112 150 48 279 0 0 0 chr10 81350217 81350248 -58966517 + (TG)n Simple_repeat Simple_repeat 2 32 0 262 239 37 85 chr10 81350763 81350914 -58965851 + MIR SINE MIR 20 164 -58 187 322 46 62 chr10 81351051 81351355 -58965410 + L3 LINE CR1 1101 1399 -178 240 349 47 8 chr10 81352852 81352981 -58963784 + MIR3 SINE MIR 21 154 -54 597 195 81 29 chr10 81353369 81353543 -58963222 - MER53 DNA DNA -1 188 6 242 253 22 77 chr10 81354375 81354466 -58962299 + MIR SINE MIR 108 193 -69 185 326 0 0 chr10 81354685 81354734 -58962031 - L3 LINE CR1 -542 1035 987 328 241 0 13 chr10 81355217 81355296 -58961469 + MIR SINE MIR 68 145 -63 3522 206 59 20 chr10 81355511 81356440 -58960325 + L1MC4a LINE L1 6844 7808 0 427 219 23 8 chr10 81356548 81356650 -58960115 - MIR SINE MIR -48 214 112 543 302 7 7 chr10 81356875 81357024 -58959741 + MIR SINE MIR 39 187 -75 232 238 0 32 chr10 81357416 81357479 -58959286 + GA-rich Low_complexity Low_complexity 4 64 0 217 283 0 0 chr10 81358071 81358124 -58958641 + MIR3 SINE MIR 108 160 -48 389 267 117 0 chr10 81358124 81358244 -58958521 + MER5B DNA MER1_type 1 134 -44 997 296 66 73 chr10 81358263 81358323 -58958442 + L1MEc LINE L1 29 88 -6308 1217 199 183 43 chr10 81358323 81358766 -58957999 - MLT1D LTR MaLR 0 505 1 997 296 66 73 chr10 81358766 81359920 -58956845 + L1MEc LINE L1 88 1234 -5162 2626 234 46 42 chr10 81359927 81360688 -58956077 - MER21B LTR ERV1 -2 861 98 253 259 12 35 chr10 81360825 81360910 -58955855 - MER21B LTR ERV1 -780 83 1 1504 250 89 31 chr10 81360944 81361653 -58955112 + L1MEc LINE L1 1257 2006 -4390 532 196 155 0 chr10 81361654 81361802 -58954963 + L1MEc LINE L1 2630 2800 -3415 643 243 86 0 chr10 81361803 81361955 -58954810 - MER63A DNA MER1_type 0 210 46 2750 255 75 27 chr10 81362019 81363185 -58953580 + L1MEc LINE L1 2806 4027 -2188 180 0 0 0 chr10 81364420 81364440 -58952325 + (CAA)n Simple_repeat Simple_repeat 2 21 0 404 214 7 69 chr10 81364550 81364695 -58952070 + FLAM_C SINE Alu 1 136 -7 2022 118 37 3 chr10 81366112 81366408 -58950357 - AluSx SINE Alu -6 306 1 1747 140 125 0 chr10 81366408 81366737 -58950028 - MSTA LTR MaLR -58 370 1 558 199 71 14 chr10 81366888 81367029 -58949736 - MER119 DNA MER1_type -1 582 434 4363 175 24 15 chr10 81369542 81369974 -58946791 + L1MB7 LINE L1 5208 5635 -549 543 125 0 0 chr10 81369974 81370054 -58946711 - MADE1 DNA Mariner 0 80 1 4363 175 24 15 chr10 81370054 81370589 -58946176 + L1MB7 LINE L1 5635 6184 0 1902 245 58 25 chr10 81371541 81372145 -58944620 + L1ME3A LINE L1 5546 6169 -1 33 0 0 0 chr10 81372650 81372683 -58944082 + AT_rich Low_complexity Low_complexity 1 33 0 281 307 69 20 chr10 81374364 81374465 -58942300 + L2 LINE L2 3147 3252 -20 238 261 0 23 chr10 81374683 81374813 -58941952 + C-rich Low_complexity Low_complexity 3 129 0 315 300 0 0 chr10 81374825 81374925 -58941840 + C-rich Low_complexity Low_complexity 1 100 0 814 151 47 23 chr10 81375084 81375256 -58941509 - MER2 DNA MER2_type -169 176 1 352 297 55 8 chr10 81375429 81375557 -58941208 - L2 LINE L2 -1 3312 3179 449 318 124 8 chr10 81375982 81376240 -58940525 - LTR16C LTR ERVL -37 454 167 226 359 39 8 chr10 81377140 81377268 -58939497 + MIR3 SINE MIR 23 154 -54 313 372 20 5 chr10 81377968 81378167 -58938598 + L2 LINE L2 2467 2668 -646 263 289 72 12 chr10 81378354 81378437 -58938328 + L2 LINE L2 3184 3271 -1 1950 197 34 21 chr10 81379114 81379592 -58937173 - L1MC4a LINE L1 -480 7328 6845 299 228 6 138 chr10 81379808 81379975 -58936790 - MIR3 SINE MIR -63 145 1 1471 184 28 16 chr10 81380532 81380852 -58935913 + MER33 DNA MER1_type 1 324 0 1140 253 43 69 chr10 81380858 81381367 -58935398 - L2 LINE L2 -1155 2159 1664 450 307 30 12 chr10 81381352 81381518 -58935247 - MIR SINE MIR -10 252 84 * 570 295 47 5 chr10 81382624 81382814 -58933951 - MIR SINE MIR -2 260 63 309 225 72 87 chr10 81383478 81383616 -58933149 - MLT1J2 LTR MaLR -48 402 267 252 328 59 19 chr10 81383899 81384014 -58932751 - MIR SINE MIR -67 141 37 802 292 42 14 chr10 81385518 81385806 -58930959 + LTR16B LTR ERVL 168 463 -1 189 74 0 0 chr10 81386615 81386642 -58930123 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 538 251 153 21 chr10 81388340 81388575 -58928190 - MLT1K LTR MaLR -4 584 319 687 140 0 0 chr10 81388577 81388677 -58928088 - LTR12 LTR ERV1 0 714 615 260 275 11 0 chr10 81388679 81388770 -58927995 - LTR30 LTR ERV1 -79 643 552 1241 77 77 73 chr10 81388791 81389011 -58927754 - LTR12 LTR ERV1 -441 273 53 241 235 0 0 chr10 81389011 81389062 -58927703 - LTR30 LTR ERV1 -670 52 2 2168 94 0 0 chr10 81389062 81389338 -58927427 + AluSg SINE Alu 27 302 -8 488 105 0 0 chr10 81390181 81390257 -58926508 - AluY SINE Alu -2 307 232 1474 80 0 0 chr10 81390257 81390433 -58926332 - AluY SINE Alu -135 176 1 391 219 141 8 chr10 81390850 81390978 -58925787 + MIR SINE MIR 117 261 -1 291 276 50 83 chr10 81391061 81391242 -58925523 - MIR3 SINE MIR -4 204 30 394 256 94 90 chr10 81392198 81392710 -58924055 + L2 LINE L2 2682 3198 -74 219 69 0 0 chr10 81392928 81392957 -58923808 + (TG)n Simple_repeat Simple_repeat 1 29 0 271 186 0 0 chr10 81393299 81393342 -58923423 + MIR SINE MIR 103 145 -117 197 262 0 0 chr10 81393599 81393641 -58923124 - MIR SINE MIR -62 146 105 315 0 0 0 chr10 81393919 81393954 -58922811 + (TG)n Simple_repeat Simple_repeat 1 35 0 2376 75 10 0 chr10 81394131 81394423 -58922342 + AluSp SINE Alu 1 295 -18 219 230 40 27 chr10 81395455 81395529 -58921236 - L2 LINE L2 -25 3247 3173 252 301 23 8 chr10 81395854 81395979 -58920786 - MIR SINE MIR -64 144 28 739 277 95 14 chr10 81396229 81396576 -58920189 - MLT1J1 LTR MaLR 0 446 72 183 352 0 0 chr10 81397850 81397904 -58918861 + L3 LINE CR1 1360 1413 -164 582 237 0 0 chr10 81398097 81398211 -58918554 - MER81 DNA DNA 0 114 1 317 295 70 25 chr10 81398540 81398740 -58918025 + L1MC5 LINE L1 7274 7482 -479 1758 235 29 55 chr10 81398887 81399101 -58917664 - L1MEc LINE L1 -5800 596 378 216 67 0 0 chr10 81399101 81399131 -58917634 + (TG)n Simple_repeat Simple_repeat 2 31 0 1758 235 29 55 chr10 81399131 81399494 -58917271 - L1MEc LINE L1 -6018 378 34 232 273 73 45 chr10 81400095 81400205 -58916560 + MIR SINE MIR 27 139 -123 380 275 28 9 chr10 81400298 81400407 -58916358 + MIR SINE MIR 39 149 -59 399 207 72 62 chr10 81400670 81400863 -58915902 - L1ME4a LINE L1 0 6121 5927 709 271 28 6 chr10 81401535 81401716 -58915049 - MIR SINE MIR -1 261 77 193 331 53 45 chr10 81402080 81402213 -58914552 + MIR SINE MIR 127 260 -2 297 275 80 7 chr10 81403497 81403635 -58913130 + MIR SINE MIR 28 175 -87 227 279 114 0 chr10 81404455 81404534 -58912231 - MIR SINE MIR -78 130 43 326 255 44 56 chr10 81404637 81404784 -58911981 + MIR3 SINE MIR 14 166 -82 187 268 67 62 chr10 81406210 81406419 -58910346 + L2 LINE L2 2402 2611 -703 246 316 18 35 chr10 81406508 81406622 -58910143 + L2 LINE L2 3202 3313 0 231 333 76 15 chr10 81406849 81406981 -58909784 - L3 LINE CR1 -27 1550 1411 220 294 12 12 chr10 81407162 81407247 -58909518 - L3 LINE CR1 -418 1159 1075 449 261 115 6 chr10 81407827 81407984 -58908781 + MIR SINE MIR 46 219 -43 912 231 96 73 chr10 81408401 81408928 -58907837 - MLT1F LTR MaLR -30 565 14 200 200 22 0 chr10 81409199 81409244 -58907521 - L2 LINE L2 0 3313 3268 471 316 77 19 chr10 81409798 81409898 -58906867 - MIR SINE MIR -28 234 141 1648 96 5 5 chr10 81409898 81410118 -58906647 - AluSq SINE Alu -11 302 83 471 316 77 19 chr10 81410118 81410226 -58906539 - MIR SINE MIR -121 141 14 1021 189 148 30 chr10 81410446 81410716 -58906049 - AluJo SINE Alu 0 302 1 262 258 142 42 chr10 81411513 81411633 -58905132 - MIR SINE MIR -71 137 6 274 265 12 12 chr10 81411655 81411738 -58905027 - L1ME3A LINE L1 -48 6122 6040 235 67 67 0 chr10 81411764 81411809 -58904956 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 659 161 0 103 chr10 81411813 81411910 -58904855 + MER47A DNA MER2_type 2 79 -2244 2304 119 0 3 chr10 81411910 81412221 -58904544 + AluSx SINE Alu 1 310 -2 659 161 0 103 chr10 81412221 81412278 -58904487 + MER47A DNA MER2_type 79 140 -226 21 0 0 0 chr10 81413360 81413381 -58903384 + AT_rich Low_complexity Low_complexity 1 21 0 268 291 100 66 chr10 81413718 81413959 -58902806 - MLT1K LTR MaLR -113 475 227 368 335 64 12 chr10 81414726 81414899 -58901866 + MIR3 SINE MIR 4 185 -23 412 351 0 8 chr10 81415285 81415416 -58901349 - MIR3 SINE MIR -54 154 25 657 320 114 21 chr10 81415688 81416202 -58900563 + L2 LINE L2 2737 3295 -18 4462 189 25 12 chr10 81416389 81417662 -58899103 + L1MB7 LINE L1 4348 5657 -527 515 125 0 0 chr10 81417662 81417742 -58899023 - MADE1 DNA Mariner 0 80 1 4462 189 25 12 chr10 81417742 81418277 -58898488 + L1MB7 LINE L1 5657 6184 0 239 211 19 0 chr10 81418468 81418520 -58898245 - Zaphod DNA AcHobo -3968 63 11 236 311 41 33 chr10 81418561 81418683 -58898082 + MER117 DNA MER1_type 22 144 -53 291 224 0 60 chr10 81418939 81419006 -58897759 - MIR SINE MIR -194 68 6 273 307 125 17 chr10 81419041 81419217 -58897548 - MIR SINE MIR -43 219 25 375 132 0 0 chr10 81419271 81419339 -58897426 + (CA)n Simple_repeat Simple_repeat 1 68 0 225 393 18 12 chr10 81419431 81419594 -58897171 + L2 LINE L2 1713 1876 -1438 543 286 116 33 chr10 81419832 81420168 -58896597 + LTR16C LTR ERVL 111 474 -17 326 297 55 8 chr10 81420568 81420696 -58896069 + L2 LINE L2 3179 3312 -1 1094 209 72 51 chr10 81420869 81421200 -58895565 + MER2 DNA MER2_type 1 338 -7 210 225 202 22 chr10 81421536 81421625 -58895140 - L2 LINE L2 -29 3284 3180 211 323 21 31 chr10 81421686 81421782 -58894983 - MIR SINE MIR 0 262 168 1493 205 45 17 chr10 81421785 81422401 -58894364 - MER63 DNA MER1_type -2 1060 255 188 220 20 20 chr10 81422429 81422479 -58894286 - MIR SINE MIR -92 170 121 204 376 0 0 chr10 81423176 81423261 -58893504 + L2 LINE L2 2872 2956 -316 210 132 0 0 chr10 81423265 81423303 -58893462 - L2 LINE L2 -213 3059 3022 386 189 0 0 chr10 81423538 81423612 -58893153 + MER116 DNA Mariner 7 80 0 387 275 108 8 chr10 81423612 81423732 -58893033 + MIR SINE MIR 105 236 -26 666 280 70 36 chr10 81423741 81423988 -58892777 - MIR SINE MIR 0 262 5 582 299 24 0 chr10 81424318 81424482 -58892283 - MLT2E LTR ERVL -429 199 32 381 250 39 70 chr10 81425105 81425233 -58891532 + MLT1L LTR MaLR 289 516 -99 233 65 0 0 chr10 81425544 81425575 -58891190 - L2 LINE L2 -3 3269 3239 222 105 0 0 chr10 81425927 81425965 -58890800 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 206 344 0 0 chr10 81425978 81426039 -58890726 - L2 LINE L2 -21 3292 3232 596 258 47 110 chr10 81426419 81426892 -58889873 - MLT1K LTR MaLR 0 588 146 308 302 135 16 chr10 81427197 81427323 -58889442 + MIR SINE MIR 33 173 -89 757 258 21 0 chr10 81428336 81428522 -58888243 - MER117 DNA MER1_type -1 196 7 885 202 116 131 chr10 81428524 81428930 -58887835 + MER21B LTR ERV1 1 400 -463 376 153 0 0 chr10 81429073 81429132 -58887633 - MER58A DNA MER1_type -3 221 163 * 596 233 241 19 chr10 81429129 81429395 -58887370 + MER21B LTR ERV1 449 808 -123 1003 164 97 0 chr10 81429466 81429661 -58887104 + MER58A DNA MER1_type 1 214 -10 231 250 33 54 chr10 81430396 81430488 -58886277 - MLT1K LTR MaLR -353 235 146 232 310 126 0 chr10 81430797 81430884 -58885881 + MIR SINE MIR 38 135 -73 286 333 86 50 chr10 81430892 81431114 -58885651 - MER102a DNA MER1_type -8 322 93 208 273 0 0 chr10 81431294 81431349 -58885416 + MIR SINE MIR 58 112 -150 365 267 0 0 chr10 81432859 81432945 -58883820 - L2 LINE L2 0 3272 3187 191 290 32 0 chr10 81432946 81433008 -58883757 - MIR SINE MIR 0 262 199 * 433 270 17 0 chr10 81432994 81433109 -58883656 + MER5B DNA MER1_type 15 131 -47 288 242 0 0 chr10 81433256 81433322 -58883443 + MER5B DNA MER1_type 108 173 -5 499 227 174 17 chr10 81433327 81433499 -58883266 - MIR SINE MIR -46 216 18 432 234 91 145 chr10 81433642 81433904 -58882861 + MLT1L LTR MaLR 90 424 -191 1769 249 59 16 chr10 81434006 81434496 -58882269 - MLT1J LTR MaLR 0 511 1 404 335 102 29 chr10 81434540 81434956 -58881809 - L2 LINE L2 -262 3010 2569 257 214 0 0 chr10 81435927 81435983 -58880782 - MIR SINE MIR -30 232 177 1732 132 6 100 chr10 81438872 81439213 -58877552 + AluJo SINE Alu 1 309 -3 409 315 0 27 chr10 81439789 81439938 -58876827 - LTR16B LTR ERVL 0 464 320 251 385 25 0 chr10 81440160 81440282 -58876483 + L2 LINE L2 2933 3057 -215 275 284 54 47 chr10 81440958 81441106 -58875659 - MIR SINE MIR -80 182 34 527 313 115 14 chr10 81442159 81442437 -58874328 + L2 LINE L2 2995 3300 -13 222 37 0 0 chr10 81442437 81442464 -58874301 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 313 305 43 7 chr10 81444219 81444360 -58872405 - MIR3 SINE MIR -30 178 33 206 241 35 0 chr10 81444494 81444552 -58872213 + MIR3 SINE MIR 15 74 -134 180 152 0 0 chr10 81445331 81445364 -58871401 + CT-rich Low_complexity Low_complexity 1 33 0 296 233 68 29 chr10 81446498 81446601 -58870164 - MIR3 SINE MIR -53 155 49 443 333 18 12 chr10 81448451 81448619 -58868146 - MIR SINE MIR -33 229 61 518 319 32 11 chr10 81448667 81448859 -58867906 + MIR SINE MIR 20 215 -47 299 281 171 46 chr10 81449556 81449819 -58866946 + L2 LINE L2 2804 3099 -173 182 265 20 0 chr10 81449976 81450025 -58866740 + L2 LINE L2 3247 3296 -17 453 261 62 25 chr10 81451497 81451658 -58865107 + MER5B DNA MER1_type 9 175 -3 857 235 16 0 chr10 81451668 81451851 -58864914 + MER5A DNA MER1_type 4 189 0 190 147 0 0 chr10 81452600 81452634 -58864131 + L2 LINE L2 3017 3050 -222 479 252 0 0 chr10 81452727 81452830 -58863935 - MIR SINE MIR -67 141 39 318 253 105 0 chr10 81453649 81453744 -58863021 - L2 LINE L2 -20 3293 3189 934 221 119 33 chr10 81456956 81457291 -58859474 - MLT1A1 LTR MaLR 0 365 2 * 1122 182 123 79 chr10 81457291 81457573 -58859192 + MLT1C LTR MaLR 53 360 -107 2280 111 3 7 chr10 81457573 81457879 -58858886 - AluSq SINE Alu -8 305 1 1122 182 123 79 chr10 81457879 81457993 -58858772 + MLT1C LTR MaLR 360 467 0 225 248 184 56 chr10 81458149 81458274 -58858491 - L3 LINE CR1 -313 1264 1124 200 160 20 60 chr10 81458324 81458374 -58858391 + (TTCA)n Simple_repeat Simple_repeat 2 49 0 349 316 51 0 chr10 81458374 81458491 -58858274 - L2 LINE L2 0 3272 3150 270 167 0 0 chr10 81459375 81459417 -58857348 - MIR SINE MIR -58 150 109 573 297 47 5 chr10 81459949 81460141 -58856624 + MIR SINE MIR 63 262 0 227 151 0 19 chr10 81460596 81460649 -58856116 + LTR66 LTR ERVL 398 449 -161 242 56 28 0 chr10 81460737 81460773 -58855992 + (TCCA)n Simple_repeat Simple_repeat 2 38 0 244 357 52 19 chr10 81461728 81461938 -58854827 - L2 LINE L2 -159 3113 2897 396 301 9 23 chr10 81462140 81462279 -58854486 - MIR SINE MIR -59 149 12 297 284 105 63 chr10 81462752 81462942 -58853823 + L2 LINE L2 2885 3082 -190 289 297 0 0 chr10 81463009 81463083 -58853682 + (TG)n Simple_repeat Simple_repeat 1 74 0 194 336 14 71 chr10 81463270 81463353 -58853412 + L2 LINE L2 3180 3253 -60 1163 162 0 73 chr10 81463353 81463587 -58853178 - MER20 DNA MER1_type 0 219 3 194 336 14 71 chr10 81463587 81463643 -58853122 + L2 LINE L2 3253 3311 -2 7582 196 30 35 chr10 81465424 81466016 -58850749 + L1MB8 LINE L1 3445 4038 -2140 1225 208 100 30 chr10 81466016 81466161 -58850604 - AluJb SINE Alu -20 292 159 387 0 0 0 chr10 81466161 81466204 -58850561 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1225 208 100 30 chr10 81466204 81466327 -58850438 - AluJb SINE Alu -153 159 5 7582 196 30 35 chr10 81466327 81467262 -58849503 + L1MB8 LINE L1 4038 4976 -1202 1888 128 10 48 chr10 81467262 81467575 -58849190 + AluJb SINE Alu 1 301 -11 7582 196 30 35 chr10 81467575 81468574 -58848191 + L1MB8 LINE L1 4976 5961 -217 1973 140 0 11 chr10 81468574 81468887 -58847878 + AluSx SINE Alu 1 310 0 7582 196 30 35 chr10 81468887 81469104 -58847661 + L1MB8 LINE L1 5961 6178 0 409 299 22 22 chr10 81469175 81469309 -58847456 - MIR3 SINE MIR -41 167 34 183 309 22 86 chr10 81470229 81470368 -58846397 + MIR3 SINE MIR 30 159 -49 260 254 79 40 chr10 81471047 81471173 -58845592 - MIR SINE MIR -32 230 100 327 170 45 152 chr10 81471833 81471945 -58844820 - MER102b DNA MER1_type -1 340 241 700 55 0 0 chr10 81472020 81472111 -58844654 + L1PA5 LINE L1 6064 6154 0 261 83 0 0 chr10 81472132 81472168 -58844597 + (TA)n Simple_repeat Simple_repeat 2 37 0 2111 132 7 0 chr10 81472168 81472455 -58844310 - AluSx SINE Alu -22 290 2 186 43 0 0 chr10 81472463 81472486 -58844279 + (TG)n Simple_repeat Simple_repeat 2 24 0 892 220 0 12 chr10 81472487 81472655 -58844110 - AluJo SINE Alu -25 287 122 395 244 73 63 chr10 81472825 81473030 -58843735 + L1ME4a LINE L1 5550 5756 -365 306 294 29 47 chr10 81473175 81473345 -58843420 + L1ME4a LINE L1 5942 6108 -13 234 284 14 40 chr10 81473462 81473536 -58843229 + MIR3 SINE MIR 105 176 -32 424 299 235 30 chr10 81473737 81474634 -58842131 - L2 LINE L2 -190 3082 1941 1330 238 129 8 chr10 81475440 81475805 -58840960 + MLT1I LTR MaLR 1 409 0 192 232 54 0 chr10 81475821 81475877 -58840888 + MIR SINE MIR 89 147 -61 241 286 13 0 chr10 81476056 81476133 -58840632 - L3 LINE CR1 -251 1326 1249 289 286 111 18 chr10 81476570 81476741 -58840024 + LTR33 LTR ERVL 327 513 -8 288 247 112 0 chr10 81477542 81477631 -58839134 + MIR SINE MIR 35 133 -129 514 322 41 25 chr10 81477697 81477939 -58838826 - MIR SINE MIR -1 261 16 373 286 32 32 chr10 81478000 81478154 -58838611 - L1MC5 LINE L1 -54 7907 7754 412 317 44 22 chr10 81478243 81478423 -58838342 + MIR3 SINE MIR 4 196 -54 1898 201 24 10 chr10 81478487 81478896 -58837869 - MLT1C LTR MaLR 0 467 53 256 303 92 97 chr10 81479184 81479629 -58837136 + L2 LINE L2 2813 3255 -17 203 311 85 33 chr10 81479763 81480033 -58836732 - L3 LINE CR1 -215 1362 1079 252 286 55 74 chr10 81481665 81481976 -58834789 + L2 LINE L2 2544 2848 -466 631 291 154 44 chr10 81482280 81482623 -58834142 + L1ME4a LINE L1 5735 6115 -6 2137 150 0 0 chr10 81483229 81483535 -58833230 + AluSx SINE Alu 1 306 -6 342 161 65 0 chr10 81483698 81483760 -58833005 - MIR SINE MIR -93 115 50 14875 175 32 56 chr10 81483827 81490901 -58825864 + L1MA4A LINE L1 73 6965 -40 777 124 78 0 chr10 81490901 81491030 -58825735 - MER85 DNA T2_type 0 139 1 14875 175 32 56 chr10 81491030 81491067 -58825698 + L1MA4A LINE L1 6965 7001 -4 213 271 0 0 chr10 81492041 81492089 -58824676 - L2 LINE L2 -3 3269 3222 277 176 0 0 chr10 81492614 81492665 -58824100 - L2 LINE L2 0 3272 3222 221 159 35 195 chr10 81492736 81492849 -58823916 + MIR3 SINE MIR 94 188 -20 186 325 104 13 chr10 81493427 81493581 -58823184 + MIR SINE MIR 63 230 -32 431 168 5 57 chr10 81493640 81493761 -58823004 - MIR SINE MIR -74 134 19 319 290 266 5 chr10 81493772 81493979 -58822786 - L2 LINE L2 -129 3184 2924 844 304 49 60 chr10 81494041 81494071 -58822694 + LTR67 LTR ERVL 93 122 -435 2539 87 11 55 chr10 81494071 81494452 -58822313 + THE1B LTR MaLR 1 364 0 844 304 49 60 chr10 81494452 81494891 -58821874 + LTR67 LTR ERVL 122 557 0 325 281 95 30 chr10 81494932 81495245 -58821520 + MLT1I LTR MaLR 66 403 -6 254 315 136 12 chr10 81495254 81495360 -58821405 - L2 LINE L2 -406 2908 2774 2385 95 0 3 chr10 81495360 81495665 -58821100 - AluSg SINE Alu -6 304 1 254 315 136 12 chr10 81495665 81495720 -58821045 - L2 LINE L2 -540 2774 2727 311 396 121 0 chr10 81495775 81495982 -58820783 - L3 LINE CR1 -20 1557 1326 239 328 84 17 chr10 81496895 81497014 -58819751 - MIR3 SINE MIR -52 156 30 237 243 14 29 chr10 81497110 81497180 -58819585 - LTR33A LTR ERVL -8 515 447 711 187 22 0 chr10 81497268 81497407 -58819358 + MLT1H LTR MaLR 393 534 -15 246 353 163 7 chr10 81498692 81498845 -58817920 + L2 LINE L2 2174 2350 -964 270 344 87 30 chr10 81498905 81499239 -58817526 + L2 LINE L2 2576 2928 -386 321 315 42 48 chr10 81499274 81499439 -58817326 + L2 LINE L2 3048 3211 -61 626 231 170 26 chr10 81499533 81499762 -58817003 - MIR SINE MIR 0 262 1 423 263 124 0 chr10 81499872 81500009 -58816756 + MER103 DNA DNA 12 165 -1 297 263 0 40 chr10 81500114 81500213 -58816552 + LTR67 LTR ERVL 459 553 -4 1272 56 11 6 chr10 81500996 81501175 -58815590 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 668 122 27 14 chr10 81501180 81501383 -58815382 + GA-rich Low_complexity Low_complexity 1 205 0 2562 68 0 3 chr10 81501632 81501962 -58814803 - AluY SINE Alu 0 329 1 1132 231 128 60 chr10 81501988 81502537 -58814228 + MLT1G LTR MaLR 1 587 -3 2270 81 27 10 chr10 81502620 81502915 -58813850 - AluSg SINE Alu -10 300 1 23 0 0 0 chr10 81502921 81502944 -58813821 + AT_rich Low_complexity Low_complexity 1 23 0 521 200 29 12 chr10 81502999 81503169 -58813596 + GA-rich Low_complexity Low_complexity 3 175 0 425 316 80 46 chr10 81503194 81503567 -58813198 + L2 LINE L2 1728 2113 -1201 1111 285 93 37 chr10 81503682 81504492 -58812273 - L1MC4a LINE L1 -328 5793 5122 2562 66 0 0 chr10 81504492 81504794 -58811971 + AluY SINE Alu 1 302 -9 1111 285 93 37 chr10 81504794 81505028 -58811737 - L1MC4a LINE L1 -999 5122 4903 1979 208 72 13 chr10 81505193 81505650 -58811115 - LTR40a LTR ERVL 0 519 36 626 323 96 16 chr10 81505666 81505969 -58810796 - L1MC4a LINE L1 -1481 4665 4339 253 339 109 23 chr10 81506015 81506399 -58810366 + L2 LINE L2 2148 2564 -750 192 77 0 0 chr10 81506806 81506832 -58809933 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 259 296 74 28 chr10 81506835 81506943 -58809822 - L2 LINE L2 -9 3263 3151 402 257 250 0 chr10 81506955 81507099 -58809666 + MER5A DNA MER1_type 10 189 0 653 306 19 14 chr10 81507839 81508048 -58808717 - MIR SINE MIR -7 255 46 478 206 36 73 chr10 81508935 81509100 -58807665 - MER102b DNA MER1_type -116 225 67 27 0 0 0 chr10 81509613 81509640 -58807125 + GC_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr10 81509687 81509708 -58807057 + GC_rich Low_complexity Low_complexity 1 21 0 180 179 0 0 chr10 81509717 81509756 -58807009 + G-rich Low_complexity Low_complexity 4 42 0 22 56 0 0 chr10 81509871 81509907 -58806858 + GC_rich Low_complexity Low_complexity 1 36 0 759 200 119 5 chr10 81510609 81510794 -58805971 - MER58C DNA MER1_type -1 214 9 499 292 35 40 chr10 81511153 81511355 -58805410 + MIR SINE MIR 37 237 -25 23 33 0 0 chr10 81511690 81511720 -58805045 + AT_rich Low_complexity Low_complexity 1 30 0 225 272 70 91 chr10 81511776 81512074 -58804691 - L1ME4a LINE L1 -82 6039 5748 1596 92 3 158 chr10 81512513 81512841 -58803924 + LTR12 LTR ERV1 1 277 -437 245 313 10 0 chr10 81512841 81512940 -58803825 + LTR30 LTR ERV1 544 643 -79 613 143 10 0 chr10 81512942 81513040 -58803725 + LTR12 LTR ERV1 615 713 -1 206 193 18 0 chr10 81513041 81513098 -58803667 + GA-rich Low_complexity Low_complexity 2 59 0 256 302 9 47 chr10 81513242 81513348 -58803417 + MIR SINE MIR 74 175 -87 326 303 84 13 chr10 81513427 81513582 -58803183 - L2 LINE L2 -28 3285 3120 2240 83 4 7 chr10 81513622 81513900 -58802865 - AluSx SINE Alu -35 277 1 464 286 110 44 chr10 81514125 81514352 -58802413 - L2 LINE L2 -387 2927 2686 2977 263 36 53 chr10 81514355 81515298 -58801467 + L1ME LINE L1 141 1066 -5139 1838 121 48 4 chr10 81515298 81515599 -58801166 + AluSx SINE Alu 1 313 0 2977 263 36 53 chr10 81515599 81515755 -58801010 + L1ME LINE L1 1066 1223 -4982 272 231 194 0 chr10 81515807 81515915 -58800850 + FLAM_A SINE Alu 5 133 0 403 226 92 7 chr10 81515988 81516180 -58800585 + L1ME LINE L1 1340 1648 -928 1265 134 25 5 chr10 81516224 81516425 -58800340 - MER2 DNA MER2_type -134 211 7 689 274 64 56 chr10 81516438 81517014 -58799751 + L1ME LINE L1 1563 2143 -4253 925 257 31 12 chr10 81517028 81517285 -58799480 - L2 LINE L2 -660 2654 2393 184 345 22 29 chr10 81517746 81517885 -58798880 + MIR SINE MIR 9 146 -116 831 287 22 4 chr10 81518095 81518325 -58798440 - MIR SINE MIR -23 239 6 21 0 0 0 chr10 81518501 81518522 -58798243 + AT_rich Low_complexity Low_complexity 1 21 0 2237 131 0 0 chr10 81518576 81518874 -58797891 + AluSx SINE Alu 1 298 -14 180 111 0 0 chr10 81518877 81518904 -58797861 + (GA)n Simple_repeat Simple_repeat 2 28 0 227 289 13 101 chr10 81519624 81519773 -58796992 + MIR3 SINE MIR 11 146 -62 268 272 44 61 chr10 81520390 81520504 -58796261 - L2 LINE L2 0 3313 3202 2391 98 6 16 chr10 81520743 81521059 -58795706 + AluSq SINE Alu 1 313 0 257 224 56 105 chr10 81521353 81521496 -58795269 + MER112 DNA MER1_type 94 229 -31 288 297 101 24 chr10 81521526 81521735 -58795030 - L2 LINE L2 -506 2808 2584 530 306 69 9 chr10 81521839 81522055 -58794710 + MIR SINE MIR 32 260 -2 229 250 26 0 chr10 81523522 81523598 -58793167 + MIR SINE MIR 54 131 -131 606 235 65 7 chr10 81524345 81524498 -58792267 - MIR SINE MIR -95 167 6 331 82 0 20 chr10 81524981 81525030 -58791735 + MLT1D LTR MaLR 246 293 -212 260 125 42 0 chr10 81525031 81525079 -58791686 + MLT1E2 LTR MaLR 528 577 -49 390 308 93 34 chr10 81525221 81525494 -58791271 - L2 LINE L2 -208 3064 2780 672 294 37 5 chr10 81525712 81525899 -58790866 + L3 LINE CR1 1384 1576 -1 221 130 14 58 chr10 81527148 81527217 -58789548 + GA-rich Low_complexity Low_complexity 4 69 0 269 303 84 25 chr10 81527544 81527663 -58789102 - MIR SINE MIR -90 172 47 394 315 44 0 chr10 81527888 81528029 -58788736 + MIR SINE MIR 37 182 -62 2151 123 0 0 chr10 81528991 81529276 -58787489 + AluSx SINE Alu 1 285 -27 198 0 0 0 chr10 81529276 81529298 -58787467 + (CA)n Simple_repeat Simple_repeat 2 23 0 275 274 82 0 chr10 81531280 81531353 -58785412 - MIR3 SINE MIR -17 191 113 234 312 0 0 chr10 81531609 81531702 -58785063 + (TG)n Simple_repeat Simple_repeat 1 93 0 267 283 189 19 chr10 81532012 81532118 -58784647 + L2 LINE L2 2925 3048 -224 598 264 21 36 chr10 81532196 81532389 -58784376 - MIR SINE MIR -53 209 20 195 42 0 0 chr10 81532613 81532637 -58784128 + (TG)n Simple_repeat Simple_repeat 2 25 0 222 128 0 0 chr10 81532722 81532761 -58784004 + (TG)n Simple_repeat Simple_repeat 1 39 0 1661 178 10 30 chr10 81533588 81533886 -58782879 + AluJb SINE Alu 1 292 -20 562 229 184 0 chr10 81534169 81534387 -58782378 - LTR33A LTR ERVL 0 523 266 476 312 127 5 chr10 81534501 81534690 -58782075 + MER102a DNA MER1_type 119 330 0 358 340 0 9 chr10 81534705 81534811 -58781954 - MIR SINE MIR -63 145 41 422 316 58 34 chr10 81536265 81536376 -58780389 - L2 LINE L2 -58 3255 3148 1856 166 0 0 chr10 81536376 81536659 -58780106 + AluJo SINE Alu 11 293 -19 422 316 58 34 chr10 81536659 81536680 -58780085 - L2 LINE L2 -165 3148 3129 804 100 0 0 chr10 81536680 81536800 -58779965 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 422 316 58 34 chr10 81536800 81536992 -58779773 - L2 LINE L2 -184 3129 2922 323 368 143 17 chr10 81537327 81537746 -58779019 + L2 LINE L2 2364 2835 -479 253 278 76 56 chr10 81537934 81538078 -58778687 + L2 LINE L2 3167 3313 0 201 152 0 0 chr10 81538746 81538779 -58777986 + (TTAGGG)n Simple_repeat Simple_repeat 3 35 0 200 244 122 0 chr10 81539110 81539192 -58777573 - MIR3 SINE MIR -16 192 101 352 299 48 27 chr10 81539230 81539377 -58777388 - MIR SINE MIR -79 183 34 1369 232 37 3 chr10 81540182 81540509 -58776256 + MER58B DNA MER1_type 1 338 -3 426 198 12 0 chr10 81540513 81540594 -58776171 + MLT1J LTR MaLR 100 181 -330 238 314 22 44 chr10 81540694 81540831 -58775934 + MLT1J LTR MaLR 326 459 -52 2215 132 0 0 chr10 81540933 81541237 -58775528 + AluSx SINE Alu 1 304 -8 480 171 0 0 chr10 81541418 81541494 -58775271 + Tigger5 DNA MER2_type 3 78 -2245 365 206 0 0 chr10 81541497 81541570 -58775195 - Tigger5 DNA MER2_type -6 2317 2245 1681 171 62 0 chr10 81541570 81541845 -58774920 - AluSx SINE Alu -20 292 1 452 207 0 0 chr10 81541848 81541930 -58774835 + Tigger5 DNA MER2_type 2242 2323 0 596 254 95 39 chr10 81542429 81542661 -58774104 + MIR SINE MIR 14 258 -4 237 308 49 54 chr10 81543285 81543470 -58773295 + MIR3 SINE MIR 3 186 -22 2107 119 35 54 chr10 81544057 81544428 -58772337 + THE1B LTR MaLR 1 364 0 381 279 18 9 chr10 81544586 81544697 -58772068 - MIR SINE MIR -41 221 110 1857 141 32 0 chr10 81544855 81545168 -58771597 - MLT1D LTR MaLR -3 502 180 197 333 113 40 chr10 81546124 81546384 -58770381 + L2 LINE L2 2399 2706 -608 2522 81 3 0 chr10 81546384 81546692 -58770073 - AluSq SINE Alu -4 309 1 197 333 113 40 chr10 81546692 81546875 -58769890 + L2 LINE L2 2706 2874 -440 281 291 12 0 chr10 81546895 81546981 -58769784 + (CA)n Simple_repeat Simple_repeat 1 87 0 216 232 43 14 chr10 81546981 81547050 -58769715 + L2 LINE L2 2906 2976 -337 1938 167 66 20 chr10 81547532 81547939 -58768826 + MSTB LTR MaLR 1 426 0 390 341 65 19 chr10 81548335 81548549 -58768216 - L2 LINE L2 0 3313 3090 460 270 72 0 chr10 81551347 81551458 -58765307 - L2 LINE L2 -22 3250 3132 220 314 155 37 chr10 81551652 81551923 -58764842 - L2 LINE L2 -467 2847 2545 693 288 11 27 chr10 81551980 81552197 -58764568 - MIR SINE MIR -8 254 40 612 329 122 25 chr10 81553211 81553685 -58763080 - L2 LINE L2 -556 2758 2239 1506 218 19 50 chr10 81553692 81554069 -58762696 - MLT1A1 LTR MaLR 0 365 1 2881 139 2 2 chr10 81554069 81554507 -58762258 - MLT1A1-int LTR MaLR 0 1735 1298 1942 196 23 91 chr10 81554511 81555025 -58761740 - MLT1A1-int LTR MaLR -804 931 453 482 318 97 44 chr10 81555093 81555549 -58761216 - L2 LINE L2 -1199 2115 1636 213 356 58 0 chr10 81556587 81556691 -58760074 + MER5B DNA MER1_type 4 113 -65 861 284 106 50 chr10 81557839 81558339 -58758426 - MLT1K LTR MaLR -41 547 20 450 331 18 18 chr10 81559164 81559333 -58757432 - MER5B DNA MER1_type -5 173 5 1204 275 83 40 chr10 81559474 81560031 -58756734 - MER66B-int LTR ERV1 -6094 582 2 871 152 112 61 chr10 81560033 81560322 -58756443 - MER66B LTR ERV1 0 486 196 240 250 0 0 chr10 81560825 81560877 -58755888 + MIR SINE MIR 72 123 -139 1043 137 10 68 chr10 81561092 81561297 -58755468 + AluSg/x SINE Alu 118 310 0 340 292 116 58 chr10 81561965 81562294 -58754471 + L1ME LINE L1 5259 5552 -569 186 367 39 0 chr10 81562465 81562593 -58754172 - L2 LINE L2 -818 2496 2364 379 286 102 0 chr10 81562923 81563070 -58753695 + L2 LINE L2 2922 3083 -230 294 148 0 0 chr10 81563115 81563169 -58753596 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 296 265 31 31 chr10 81564650 81564748 -58752017 - L2 LINE L2 -58 3255 3158 1836 174 3 0 chr10 81564761 81565042 -58751723 + AluJo SINE Alu 11 295 -17 216 0 0 0 chr10 81565042 81565066 -58751699 + (GA)n Simple_repeat Simple_repeat 2 25 0 1836 174 3 0 chr10 81565066 81565083 -58751682 + AluJo SINE Alu 295 310 -2 522 108 0 0 chr10 81565087 81565170 -58751595 + (GGAA)n Simple_repeat Simple_repeat 1 83 0 1752 196 0 7 chr10 81566342 81566648 -58750117 - AluJo SINE Alu -8 304 1 2513 86 0 10 chr10 81566674 81566988 -58749777 + AluY SINE Alu 1 311 0 1929 86 100 11 chr10 81566994 81567263 -58749502 + AluY SINE Alu 1 293 -18 439 311 58 29 chr10 81567265 81567506 -58749259 - L1 LINE L1 -1169 4977 4730 787 246 94 5 chr10 81567767 81567970 -58748795 + MER58A DNA MER1_type 4 224 0 2215 139 19 6 chr10 81569372 81569732 -58747033 + MLT1A1 LTR MaLR 1 365 0 408 339 36 18 chr10 81569748 81569913 -58746852 + MIR SINE MIR 25 192 -70 882 211 53 11 chr10 81570540 81570730 -58746035 - MIR SINE MIR -48 214 17 448 201 61 104 chr10 81571200 81571364 -58745401 + L2 LINE L2 3155 3311 -2 815 204 122 10 chr10 81571385 81571581 -58745184 - MER20 DNA MER1_type 0 219 2 485 323 56 5 chr10 81573001 81573199 -58743566 + MIR SINE MIR 7 214 -48 3942 89 5 2 chr10 81574285 81574837 -58741928 - THE1A-int LTR MaLR -1026 554 1 2777 96 0 0 chr10 81574837 81575192 -58741573 - THE1A LTR MaLR 0 355 1 195 42 0 0 chr10 81575193 81575217 -58741548 + (TA)n Simple_repeat Simple_repeat 1 24 0 2620 189 58 17 chr10 81575254 81576254 -58740511 + L1MC4 LINE L1 6714 7902 -140 1016 174 62 0 chr10 81576286 81576464 -58740301 - AluSg/x SINE Alu -3 309 121 1904 139 6 43 chr10 81576501 81576824 -58739941 + AluSx SINE Alu 2 312 0 320 316 56 63 chr10 81577528 81578084 -58738681 + L1ME4a LINE L1 5296 5847 -274 2023 152 27 38 chr10 81578848 81579216 -58737549 - THE1B LTR MaLR 0 364 1 569 184 158 0 chr10 81579366 81579480 -58737285 + FLAM_C SINE Alu 2 133 0 22 35 0 0 chr10 81579481 81579510 -58737255 + AT_rich Low_complexity Low_complexity 1 29 0 487 295 145 5 chr10 81579692 81580086 -58736679 - L1ME3 LINE L1 -185 5977 5532 194 383 21 35 chr10 81580400 81580541 -58736224 + MIR3 SINE MIR 41 179 -29 1625 140 12 81 chr10 81580816 81581137 -58735628 - AluSx SINE Alu -13 299 1 775 290 36 22 chr10 81581194 81581418 -58735347 + MIR SINE MIR 34 260 -2 186 43 0 0 chr10 81581825 81581848 -58734917 + (TG)n Simple_repeat Simple_repeat 2 24 0 243 274 107 12 chr10 81582036 81582120 -58734645 - L2 LINE L2 -85 3187 3096 2432 251 83 21 chr10 81582474 81583456 -58733309 + HAL1 LINE L1 1065 2107 -400 367 255 16 167 chr10 81584291 81584498 -58732267 - MIR SINE MIR -72 190 16 207 289 26 26 chr10 81584723 81584799 -58731966 + L3 LINE CR1 1204 1279 -298 320 264 173 0 chr10 81585091 81585201 -58731564 - MIR3 SINE MIR -73 135 7 205 336 144 8 chr10 81585399 81585524 -58731241 + MIR3 SINE MIR 4 145 -63 639 304 50 29 chr10 81585679 81586057 -58730708 - LTR16A1 LTR ERVL -22 435 50 324 278 196 23 chr10 81586140 81586313 -58730452 - MIR SINE MIR -59 203 1 301 358 12 6 chr10 81586541 81586714 -58730051 + (TGG)n Simple_repeat Simple_repeat 3 176 0 324 200 0 0 chr10 81586754 81586829 -58729936 + (TGG)n Simple_repeat Simple_repeat 3 77 0 210 239 0 0 chr10 81586916 81586987 -58729778 + (ATGGTG)n Simple_repeat Simple_repeat 1 71 0 182 157 0 59 chr10 81587056 81587107 -58729658 + (ATGGTG)n Simple_repeat Simple_repeat 5 52 0 511 326 152 0 chr10 81587951 81588175 -58728590 - MIR SINE MIR -2 260 3 477 262 7 35 chr10 81589234 81589375 -58727390 - MIR SINE MIR -8 254 118 21 0 0 0 chr10 81589847 81589868 -58726897 + AT_rich Low_complexity Low_complexity 1 21 0 180 191 95 0 chr10 81589880 81589922 -58726843 - MIR SINE MIR -66 142 97 424 302 7 0 chr10 81590134 81590273 -58726492 + (CCA)n Simple_repeat Simple_repeat 1 140 0 921 215 77 5 chr10 81590660 81590855 -58725910 + MER3 DNA MER1_type 1 209 0 292 298 149 0 chr10 81591685 81591799 -58724966 - LTR16C LTR ERVL -1 490 360 404 290 55 0 chr10 81591844 81591989 -58724776 - LTR16C LTR ERVL -202 289 137 302 291 27 18 chr10 81592074 81592184 -58724581 + MIR SINE MIR 95 205 -57 732 313 121 36 chr10 81592496 81592838 -58723927 + MLT1L LTR MaLR 130 520 -95 945 224 55 24 chr10 81592838 81593092 -58723673 - MIR SINE MIR 0 262 1 732 313 121 36 chr10 81593092 81593197 -58723568 + MLT1L LTR MaLR 520 615 0 332 276 57 9 chr10 81593351 81593456 -58723309 - MIR SINE MIR -27 235 126 530 267 93 0 chr10 81593467 81593628 -58723137 - MIR SINE MIR -2 260 85 323 375 16 5 chr10 81594561 81594753 -58722012 + LTR16C LTR ERVL 134 327 -164 272 249 169 78 chr10 81594740 81595149 -58721616 + LTR67 LTR ERVL 109 554 -3 * 258 298 50 62 chr10 81595322 81595483 -58721282 - L2 LINE L2 -95 3177 3019 267 79 0 0 chr10 81595737 81595775 -58720990 + (CA)n Simple_repeat Simple_repeat 1 38 0 411 319 19 13 chr10 81595976 81596133 -58720632 + MIR3 SINE MIR 3 160 -48 499 276 122 0 chr10 81596138 81596294 -58720471 + MER117 DNA MER1_type 6 180 -17 576 254 0 0 chr10 81596373 81596495 -58720270 - MER63A DNA MER1_type -2 208 87 276 218 218 36 chr10 81597032 81597142 -58719623 - MIR3 SINE MIR -45 163 34 2825 123 9 2 chr10 81597144 81597565 -58719200 - LTR12 LTR ERV1 -234 480 57 375 44 0 0 chr10 81597565 81597610 -58719155 - LTR12 LTR ERV1 -617 97 53 235 231 0 0 chr10 81597610 81597662 -58719103 - LTR30 LTR ERV1 -670 52 1 264 258 15 76 chr10 81597738 81597870 -58718895 - MIR3 SINE MIR -80 128 5 258 292 14 0 chr10 81598702 81598774 -58717991 - L2 LINE L2 -208 3064 2992 497 286 68 14 chr10 81599020 81599240 -58717525 + L1ME LINE L1 5588 5819 -302 1406 221 78 48 chr10 81599254 81599730 -58717035 - LTR16C LTR ERVL -1 490 1 318 217 84 12 chr10 81599759 81599842 -58716923 + MER103 DNA DNA 30 118 -48 321 135 0 0 chr10 81600171 81600223 -58716542 + (CA)n Simple_repeat Simple_repeat 1 52 0 488 327 25 0 chr10 81600224 81600426 -58716339 + L1MC4a LINE L1 5729 5935 -1873 558 162 44 22 chr10 81600706 81600842 -58715923 + L1ME4a LINE L1 5983 6121 0 232 361 115 23 chr10 81601674 81601934 -58714831 - L3b LINE CR1 -13 1570 1287 344 286 30 44 chr10 81603306 81603441 -58713324 + MIR SINE MIR 18 149 -60 360 322 51 0 chr10 81603498 81603616 -58713149 - MIR SINE MIR -80 182 59 596 242 51 67 chr10 81603720 81604034 -58712731 + MLT1G1 LTR MaLR 1 309 -286 390 347 79 0 chr10 81604913 81605103 -58711662 - MIR SINE MIR -50 212 8 25 0 0 0 chr10 81605470 81605495 -58711270 + AT_rich Low_complexity Low_complexity 1 25 0 180 254 111 0 chr10 81606267 81606330 -58710435 - MIR SINE MIR -85 123 54 278 316 62 28 chr10 81607279 81607456 -58709309 + L2 LINE L2 2851 3033 -239 241 358 67 15 chr10 81607606 81607740 -58709025 + L2 LINE L2 3132 3272 0 208 320 10 30 chr10 81608670 81608770 -58707995 - L3 LINE CR1 -411 1166 1069 745 255 27 0 chr10 81608915 81609099 -58707666 - MER5A DNA MER1_type 0 189 1 903 164 0 0 chr10 81610393 81610564 -58706201 + (TGGG)n Simple_repeat Simple_repeat 1 171 0 225 154 0 0 chr10 81610567 81610606 -58706159 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 198 234 43 85 chr10 81610652 81610746 -58706019 - MER5C DNA MER1_type -7 317 228 228 213 319 0 chr10 81610757 81610851 -58705914 - MER5C DNA MER1_type -200 124 1 357 364 51 11 chr10 81610866 81611042 -58705723 - MIR SINE MIR -48 214 32 342 0 0 0 chr10 81612212 81612250 -58704515 + (CA)n Simple_repeat Simple_repeat 2 39 0 364 240 115 10 chr10 81612349 81612453 -58704312 - MIR3 SINE MIR -51 157 43 584 250 11 19 chr10 81612991 81613226 -58703539 - MIR SINE MIR 0 262 31 289 227 62 47 chr10 81613749 81613877 -58702888 - MIR SINE MIR -112 150 21 372 280 47 27 chr10 81614624 81614774 -58701991 - L2 LINE L2 0 3313 3161 322 283 0 11 chr10 81614887 81614979 -58701786 + MIR3 SINE MIR 66 156 -52 250 268 73 85 chr10 81615154 81615318 -58701447 + L2 LINE L2 2920 3081 -191 665 256 28 19 chr10 81615509 81615724 -58701041 - MIR SINE MIR 0 262 46 448 333 86 18 chr10 81615724 81616060 -58700705 - L1MC4a LINE L1 -1869 5939 5581 392 276 153 15 chr10 81616363 81616566 -58700199 - MER102a DNA MER1_type 0 330 100 1673 164 3 30 chr10 81616638 81616943 -58699822 + AluJo SINE Alu 1 297 -15 243 282 31 15 chr10 81617353 81617479 -58699286 + MIR SINE MIR 22 148 -68 284 250 0 0 chr10 81617616 81617676 -58699089 + MER94 DNA DNA 75 134 0 1328 245 86 28 chr10 81618210 81618638 -58698127 - MLT1C LTR MaLR -7 460 8 871 248 48 77 chr10 81619062 81619541 -58697224 + L2 LINE L2 2804 3268 -45 237 269 102 28 chr10 81619579 81619687 -58697078 + L2 LINE L2 3179 3294 -19 249 33 0 0 chr10 81619786 81619816 -58696949 + (TC)n Simple_repeat Simple_repeat 1 30 0 527 191 0 6 chr10 81619899 81620077 -58696688 + (CA)n Simple_repeat Simple_repeat 1 177 0 195 69 0 0 chr10 81620076 81620105 -58696660 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 397 246 57 0 chr10 81620134 81620256 -58696509 - L2 LINE L2 -5 3267 3139 180 294 20 0 chr10 81620300 81620351 -58696414 + MIR SINE MIR 96 147 -61 210 311 0 40 chr10 81620550 81620624 -58696141 + MIR SINE MIR 81 151 -111 224 245 19 0 chr10 81621004 81621057 -58695708 - L2 LINE L2 -25 3288 3235 243 293 69 4 chr10 81621574 81621723 -58695042 - MIR SINE MIR -47 161 3 300 299 47 0 chr10 81622670 81622777 -58693988 + L2 LINE L2 3191 3302 -11 303 322 17 9 chr10 81622922 81623037 -58693728 + L2 LINE L2 2951 3066 -206 1644 193 135 10 chr10 81623085 81623500 -58693265 + MLT1C LTR MaLR 1 467 0 323 245 53 0 chr10 81623500 81623586 -58693179 + MIR SINE MIR 54 147 -115 542 241 96 31 chr10 81623594 81623861 -58692904 + MLT1J2 LTR MaLR 23 314 -132 1796 136 151 0 chr10 81624107 81624431 -58692334 - MER83C LTR ERV1 0 373 1 278 328 128 16 chr10 81624431 81624546 -58692219 + MIR3 SINE MIR 28 159 -49 319 278 42 21 chr10 81624559 81624703 -58692062 - MER117 DNA MER1_type -50 147 1 400 265 10 0 chr10 81625398 81625495 -58691270 - L1MC4 LINE L1 -1339 6983 1996 473 294 102 26 chr10 81625945 81626248 -58690517 - MER102b DNA MER1_type 0 341 16 596 245 83 21 chr10 81627132 81627324 -58689441 + MIR SINE MIR 54 257 -5 250 300 82 20 chr10 81627331 81627532 -58689233 - MIR SINE MIR -41 221 6 667 221 81 0 chr10 81627782 81627931 -58688834 - MER5A DNA MER1_type -6 183 23 242 206 145 38 chr10 81628092 81628223 -58688542 - L2 LINE L2 -339 2974 2830 238 284 198 0 chr10 81628244 81628360 -58688405 + MLT1J1 LTR MaLR 59 197 -249 369 236 217 25 chr10 81628697 81628782 -58687983 - MER5A DNA MER1_type 0 189 122 2203 122 30 0 chr10 81628782 81629085 -58687680 - AluSx SINE Alu 0 312 1 369 236 217 25 chr10 81629085 81629156 -58687609 - MER5A DNA MER1_type -67 122 3 1906 155 3 33 chr10 81629160 81629463 -58687302 + AluJo SINE Alu 1 294 -18 240 188 47 129 chr10 81629683 81629768 -58686997 + MIR SINE MIR 101 178 -84 600 204 43 19 chr10 81629847 81630009 -58686756 + MLT1J LTR MaLR 281 446 -65 1067 193 28 9 chr10 81630348 81630561 -58686204 - MER20 DNA MER1_type 0 219 3 687 189 34 23 chr10 81630572 81630747 -58686018 - MER5B DNA MER1_type -1 177 1 331 314 72 7 chr10 81631529 81631682 -58685083 + MER5A DNA MER1_type 24 186 -3 212 313 10 21 chr10 81631855 81631951 -58684814 - MIR SINE MIR -88 120 26 419 319 26 26 chr10 81632310 81632501 -58684264 - MIR SINE MIR 0 262 72 341 304 104 60 chr10 81632605 81632918 -58683847 + L2 LINE L2 2836 3173 -99 1197 183 103 71 chr10 81632918 81633296 -58683469 - MLT1B LTR MaLR 0 390 1 341 304 104 60 chr10 81633296 81633397 -58683368 + L2 LINE L2 3173 3268 -4 211 241 92 46 chr10 81633383 81633470 -58683295 - L3 LINE CR1 -62 1515 1425 * 180 0 0 0 chr10 81633553 81633573 -58683192 + (TAA)n Simple_repeat Simple_repeat 2 21 0 839 235 0 0 chr10 81633600 81633762 -58683003 + FRAM SINE Alu 1 162 -4 217 324 166 0 chr10 81633789 81633928 -58682837 - L3 LINE CR1 -229 1348 1187 181 333 44 18 chr10 81634976 81635090 -58681675 - MIR SINE MIR -12 250 134 216 360 22 29 chr10 81635680 81635819 -58680946 - MIR SINE MIR -29 233 96 382 330 100 31 chr10 81635945 81636266 -58680499 - L2 LINE L2 0 3272 2930 232 316 145 3 chr10 81636370 81636652 -58680113 - L2 LINE L2 -572 2742 2421 233 290 122 8 chr10 81636907 81637038 -58679727 + MIR SINE MIR 108 253 -9 697 281 15 0 chr10 81637495 81637691 -58679074 + MIR SINE MIR 63 261 -1 250 288 0 41 chr10 81637925 81638071 -58678694 + C-rich Low_complexity Low_complexity 3 142 0 251 305 0 0 chr10 81638211 81638270 -58678495 + (CAGGG)n Simple_repeat Simple_repeat 3 61 0 209 281 52 21 chr10 81638415 81638511 -58678254 - MIR3 SINE MIR -43 165 67 452 364 11 5 chr10 81640635 81640822 -58675943 + MIR3 SINE MIR 13 200 -8 618 287 55 48 chr10 81640944 81641233 -58675532 - MER102b DNA MER1_type -44 297 7 2044 155 94 5 chr10 81641251 81641644 -58675121 - MSTA LTR MaLR 0 428 1 252 343 94 32 chr10 81642707 81643016 -58673749 - L2 LINE L2 -421 2893 2566 460 283 32 59 chr10 81643915 81643978 -58672787 - MIR SINE MIR -47 215 152 1029 286 48 29 chr10 81643978 81644457 -58672308 - LTR16C LTR ERVL -2 489 2 460 283 32 59 chr10 81644457 81644580 -58672185 - MIR SINE MIR -110 152 34 1523 219 66 15 chr10 81645554 81645964 -58670801 - MER63B DNA MER1_type -4 432 2 588 263 41 31 chr10 81646241 81646435 -58670330 - MIR SINE MIR -54 208 13 265 214 14 14 chr10 81646586 81646656 -58670109 + CT-rich Low_complexity Low_complexity 5 74 0 253 245 75 19 chr10 81646924 81647030 -58669735 - MER104 DNA Tc2 -25 155 44 324 274 137 61 chr10 81647131 81647394 -58669371 - L2 LINE L2 0 3313 3031 525 311 101 42 chr10 81647506 81647934 -58668831 - L2 LINE L2 -479 2835 2383 215 281 41 33 chr10 81648158 81648279 -58668486 - L2 LINE L2 -218 3054 2933 554 200 33 13 chr10 81648420 81648444 -58668321 - L1MA10 LINE L1 -2 6332 6309 3366 203 40 11 chr10 81648444 81649942 -58666823 - L1ME1 LINE L1 -15 6151 4619 540 273 83 24 chr10 81650488 81650693 -58666072 - MIR SINE MIR -31 231 15 247 297 33 11 chr10 81651004 81651095 -58665670 - MLT1K LTR MaLR -44 544 452 384 322 146 17 chr10 81651195 81651434 -58665331 - MLT1K LTR MaLR -315 273 4 245 293 53 0 chr10 81653007 81653082 -58663683 + L2 LINE L2 3235 3313 0 356 254 74 25 chr10 81653661 81653783 -58662982 + MIR3 SINE MIR 45 172 -36 617 259 56 48 chr10 81653924 81654175 -58662590 - MLT1I LTR MaLR -29 380 128 205 176 0 0 chr10 81654855 81654889 -58661876 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 2296 99 3 0 chr10 81655018 81655320 -58661445 + AluSc SINE Alu 1 303 -6 561 262 47 37 chr10 81655332 81655546 -58661219 - MIR SINE MIR -13 249 34 187 278 46 74 chr10 81655793 81655901 -58660864 - L2 LINE L2 -211 3061 2957 267 330 107 27 chr10 81655946 81656170 -58660595 + MIR SINE MIR 20 261 -1 263 258 34 45 chr10 81656814 81656903 -58659862 - MIR SINE MIR -108 154 67 379 283 8 8 chr10 81657079 81657199 -58659566 + L2 LINE L2 3192 3311 -2 301 185 15 0 chr10 81657203 81657268 -58659497 + L2 LINE L2 2478 2543 -771 2456 232 7 32 chr10 81657268 81657759 -58659006 + L1ME1 LINE L1 5449 5897 -281 1011 62 0 0 chr10 81657759 81657887 -58658878 + L1PA5 LINE L1 6023 6150 -4 2456 232 7 32 chr10 81657887 81658163 -58658602 + L1ME1 LINE L1 5897 6178 0 1758 166 0 11 chr10 81658173 81658457 -58658308 + AluJo SINE Alu 1 281 -31 220 282 12 12 chr10 81658496 81658581 -58658184 + L2 LINE L2 2543 2627 -687 1186 217 93 37 chr10 81658662 81659017 -58657748 + LTR16A1 LTR ERVL 83 457 0 1839 336 31 31 chr10 81659085 81660061 -58656704 + HERV16 LTR ERVL 97 1072 -3924 453 147 0 0 chr10 81660116 81660184 -58656581 + MER58 DNA MER1_type 2353 2420 0 576 244 0 0 chr10 81660267 81660394 -58656371 + L1MB5 LINE L1 4579 4705 -1441 4818 170 33 30 chr10 81660583 81662049 -58654716 + L1MB5 LINE L1 4692 6166 -8 3353 314 65 47 chr10 81662124 81662416 -58654349 + HERV16 LTR ERVL 1342 1627 -4137 1160 203 9 5 chr10 81662416 81662638 -58654127 + MER58A DNA MER1_type 1 223 -1 3353 314 65 47 chr10 81662638 81663331 -58653434 + HERV16 LTR ERVL 1627 2306 -3458 2200 107 21 0 chr10 81663331 81663622 -58653143 + AluSx SINE Alu 1 297 -15 3353 314 65 47 chr10 81663622 81664401 -58652364 + HERV16 LTR ERVL 2306 3069 -2695 1844 120 69 72 chr10 81664401 81664777 -58651988 - THE1C LTR MaLR 0 375 1 3353 314 65 47 chr10 81664777 81665834 -58650931 + HERV16 LTR ERVL 3069 4250 -1514 310 329 77 38 chr10 81665847 81666160 -58650605 + HERV16 LTR ERVL 5004 5328 -436 1119 261 62 44 chr10 81666339 81666775 -58649990 + LTR16A1 LTR ERVL 1 444 -13 237 284 34 45 chr10 81666798 81666886 -58649879 + L2 LINE L2 3186 3272 0 674 246 144 69 chr10 81667273 81667578 -58649187 - MER102a DNA MER1_type 0 330 3 243 287 115 11 chr10 81667959 81668046 -58648719 - MIR SINE MIR -71 137 42 398 53 18 0 chr10 81668242 81668299 -58648466 + (CA)n Simple_repeat Simple_repeat 1 58 0 280 228 114 35 chr10 81668966 81669080 -58647685 + MIR3 SINE MIR 44 166 -42 1636 184 43 60 chr10 81669197 81669566 -58647199 + MLT1A2 LTR MaLR 1 363 -11 274 197 33 33 chr10 81669577 81669638 -58647127 + MER103 DNA DNA 58 118 -48 1577 242 73 42 chr10 81669642 81670118 -58646647 - LTR16C LTR ERVL 0 491 1 599 254 134 23 chr10 81670642 81670859 -58645906 + MIR SINE MIR 7 247 -15 190 286 29 0 chr10 81670886 81670956 -58645809 - MIR SINE MIR -10 252 181 210 37 0 0 chr10 81670959 81670986 -58645779 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 273 278 40 76 chr10 81671585 81671783 -58644982 - MIR3 SINE MIR -5 203 13 351 0 0 0 chr10 81672891 81672930 -58643835 + (TG)n Simple_repeat Simple_repeat 1 39 0 296 265 137 73 chr10 81673385 81673887 -58642878 + MLT1J LTR MaLR 34 511 0 2707 93 8 11 chr10 81674168 81674544 -58642221 - THE1C LTR MaLR 0 375 1 5557 104 27 1 chr10 81674544 81675322 -58641443 - THE1C-int LTR MaLR 0 1580 783 275 175 16 16 chr10 81675447 81675510 -58641255 - L2 LINE L2 -213 3059 2997 261 222 83 28 chr10 81676159 81676231 -58640534 - L2 LINE L2 0 3272 3197 213 159 0 0 chr10 81678012 81678056 -58638709 + (CA)n Simple_repeat Simple_repeat 1 44 0 318 362 0 0 chr10 81678143 81678292 -58638473 + (CA)n Simple_repeat Simple_repeat 2 150 0 191 215 15 0 chr10 81678491 81678556 -58638209 + (CA)n Simple_repeat Simple_repeat 1 66 0 201 256 0 0 chr10 81678601 81678683 -58638082 + (CA)n Simple_repeat Simple_repeat 1 82 0 278 250 0 30 chr10 81678722 81678854 -58637911 + (CATATA)n Simple_repeat Simple_repeat 6 133 0 436 319 0 0 chr10 81678865 81679003 -58637762 + (CA)n Simple_repeat Simple_repeat 1 138 0 381 43 0 0 chr10 81679030 81679077 -58637688 + (CA)n Simple_repeat Simple_repeat 2 48 0 1868 153 47 7 chr10 81679124 81679424 -58637341 + AluJb SINE Alu 1 312 0 260 212 15 0 chr10 81679438 81679504 -58637261 + GA-rich Low_complexity Low_complexity 1 67 0 637 108 0 18 chr10 81679531 81679642 -58637123 + (GGAA)n Simple_repeat Simple_repeat 2 110 0 215 260 26 13 chr10 81679704 81679781 -58636984 - MIR SINE MIR -119 143 66 221 328 181 0 chr10 81680219 81680396 -58636369 + MIR SINE MIR 51 259 -3 478 268 0 24 chr10 81680714 81680841 -58635924 - MIR SINE MIR -68 140 17 501 281 60 36 chr10 81681102 81681436 -58635329 + L1M4 LINE L1 4490 4831 -1315 286 208 20 59 chr10 81681735 81681836 -58634929 + L1MC5 LINE L1 7833 7929 -32 842 265 135 57 chr10 81681993 81682533 -58634232 + MLT1K LTR MaLR 3 584 -4 22 0 0 0 chr10 81683538 81683560 -58633205 + AT_rich Low_complexity Low_complexity 1 22 0 906 296 17 32 chr10 81683640 81684070 -58632695 - L1ME3A LINE L1 -96 6025 5594 597 336 68 17 chr10 81684222 81684517 -58632248 + MLT1I LTR MaLR 100 409 0 308 302 35 43 chr10 81684520 81684636 -58632129 - L2 LINE L2 -7 3265 3151 788 287 39 10 chr10 81684767 81685142 -58631623 - MLT1K LTR MaLR -116 472 22 949 224 56 0 chr10 81685184 81685380 -58631385 - MER63A DNA MER1_type -1 209 3 391 267 30 30 chr10 81685392 81685557 -58631208 + MIR3 SINE MIR 41 205 -3 1871 166 16 0 chr10 81686553 81686860 -58629905 - AluJo SINE Alu 0 312 1 287 324 19 0 chr10 81686865 81686970 -58629795 - L2 LINE L2 -12 3301 3195 * 379 285 69 0 chr10 81686957 81687087 -58629678 - MIR SINE MIR -76 186 48 242 343 0 19 chr10 81687229 81687334 -58629431 - L3 LINE CR1 -296 1281 1179 191 344 0 0 chr10 81687357 81687421 -58629344 - MER5A DNA MER1_type 0 189 126 857 153 14 93 chr10 81687432 81687555 -58629210 + Charlie5 DNA MER1_type 2 105 -2519 1967 143 3 3 chr10 81687555 81687884 -58628881 + AluSx SINE Alu 1 329 0 857 153 14 93 chr10 81687884 81687973 -58628792 + Charlie5 DNA MER1_type 105 199 -2425 * 875 147 11 40 chr10 81687972 81688149 -58628616 + Charlie5 DNA MER1_type 2352 2523 -89 647 209 9 0 chr10 81688150 81688291 -58628474 + FLAM_A SINE Alu 2 143 0 23 0 0 0 chr10 81688307 81688330 -58628435 + AT_rich Low_complexity Low_complexity 1 23 0 527 197 0 8 chr10 81688330 81688423 -58628342 + (CA)n Simple_repeat Simple_repeat 2 94 -28 2015 159 3 50 chr10 81688423 81688735 -58628030 - MER47A DNA MER2_type -1957 366 74 2134 126 0 0 chr10 81688735 81689029 -58627736 + AluSx SINE Alu 1 294 -18 2015 159 3 50 chr10 81689029 81689100 -58627665 - MER47A DNA MER2_type -2249 74 1 2005 142 11 37 chr10 81689105 81689458 -58627307 + MER2 DNA MER2_type 1 344 0 527 197 0 8 chr10 81689458 81689480 -58627285 + (CA)n Simple_repeat Simple_repeat 98 122 0 242 254 79 35 chr10 81689511 81689625 -58627140 - L3 LINE CR1 -405 1172 1054 728 291 48 27 chr10 81689675 81690046 -58626719 - L3 LINE CR1 -661 916 538 533 289 134 34 chr10 81690120 81690507 -58626258 + L1ME4a LINE L1 5621 6046 -75 233 317 83 28 chr10 81690525 81690670 -58626095 - MIR SINE MIR -62 200 48 444 233 20 135 chr10 81690802 81690912 -58625853 + L2 LINE L2 1569 1690 -1624 1933 161 3 0 chr10 81690912 81691211 -58625554 + AluSx SINE Alu 1 300 -12 444 233 20 135 chr10 81691211 81691224 -58625541 + L2 LINE L2 1690 1703 -1611 1916 164 0 13 chr10 81691224 81691528 -58625237 + AluJo SINE Alu 1 300 -12 444 233 20 135 chr10 81691528 81691648 -58625117 + L2 LINE L2 1703 1785 -1529 1507 135 9 26 chr10 81691680 81691982 -58624783 + MSTA LTR MaLR 1 339 -89 1104 119 23 17 chr10 81692328 81692505 -58624260 + MLT1A2 LTR MaLR 1 178 -196 246 179 0 0 chr10 81692506 81692562 -58624203 + CT-rich Low_complexity Low_complexity 1 56 0 1068 202 30 0 chr10 81692567 81692765 -58624000 + MLT1A2 LTR MaLR 187 390 0 1788 174 65 39 chr10 81693394 81693780 -58622985 + MSTD LTR MaLR 1 396 0 344 314 128 38 chr10 81693865 81694155 -58622610 + HAL1b LINE L1 337 652 -696 791 274 148 12 chr10 81694160 81694485 -58622280 + MLT1K LTR MaLR 190 558 -30 4011 211 28 17 chr10 81694504 81694666 -58622099 - L1M4 LINE L1 -2008 4138 3979 1143 241 104 23 chr10 81694666 81695098 -58621667 - MLT1C LTR MaLR 0 467 1 4011 211 28 17 chr10 81695098 81695911 -58620854 - L1M4 LINE L1 -2167 3979 3153 2378 211 25 2 chr10 81695906 81696433 -58620332 - L1M4 LINE L1 -3382 2764 2226 * 626 198 6 37 chr10 81696442 81696604 -58620161 - L1MC5 LINE L1 -183 7778 7622 207 302 68 26 chr10 81696913 81697105 -58619660 + L2 LINE L2 2328 2527 -787 414 266 28 21 chr10 81697370 81697513 -58619252 - MIR SINE MIR -108 154 11 387 232 134 7 chr10 81698196 81698338 -58618427 + HAL1 LINE L1 771 930 -1577 1604 206 92 20 chr10 81698346 81698782 -58617983 - MER31A LTR ERV1 -10 533 1 272 226 179 10 chr10 81698804 81698820 -58617945 + HAL1 LINE L1 920 932 -1575 2046 147 20 0 chr10 81698820 81699126 -58617639 + AluSx SINE Alu 1 312 0 272 226 179 10 chr10 81699126 81699304 -58617461 + HAL1 LINE L1 932 1147 -1360 307 296 0 80 chr10 81699407 81699569 -58617196 - L2 LINE L2 -299 2973 2825 755 173 18 159 chr10 81699699 81699770 -58616995 - MLT1G1 LTR MaLR 0 595 516 1926 136 7 0 chr10 81699770 81700043 -58616722 + AluSx SINE Alu 1 275 -37 755 173 18 159 chr10 81700043 81700197 -58616568 - MLT1G1 LTR MaLR -79 516 402 475 238 109 57 chr10 81700196 81700444 -58616321 - MLT1K LTR MaLR -236 352 92 * 279 296 31 0 chr10 81701037 81701135 -58615630 - L3 LINE CR1 -96 1481 1381 230 256 81 12 chr10 81701651 81701737 -58615028 + MIR SINE MIR 81 172 -90 2349 217 31 6 chr10 81702195 81702828 -58613937 - MER99 DNA DNA -85 743 43 499 322 40 23 chr10 81703055 81703229 -58613536 + MIR SINE MIR 34 210 -52 389 138 49 24 chr10 81703628 81703751 -58613014 + GA-rich Low_complexity Low_complexity 3 128 0 996 153 132 171 chr10 81703787 81704174 -58612591 - MLT1B LTR MaLR -2 388 1 545 259 58 17 chr10 81704329 81704503 -58612262 - MLT1K LTR MaLR -3 585 405 4421 50 0 9 chr10 81704681 81705262 -58611503 - L1P LINE L1 -2991 3155 2580 324 265 116 51 chr10 81705264 81705479 -58611286 - L1M4c LINE L1 -5209 1175 947 233 229 29 14 chr10 81705523 81705593 -58611172 + CT-rich Low_complexity Low_complexity 5 75 0 1081 158 0 0 chr10 81706045 81706222 -58610543 - AluJo SINE Alu -2 310 134 217 200 22 0 chr10 81706223 81706268 -58610497 + (TA)n Simple_repeat Simple_repeat 2 47 0 354 260 70 10 chr10 81706268 81706368 -58610397 - L1MC4 LINE L1 -1322 6720 6615 1597 156 7 20 chr10 81706368 81706663 -58610102 - AluJo SINE Alu -21 291 1 481 239 14 22 chr10 81706664 81706802 -58609963 - AluJo SINE Alu -174 138 2 6371 41 6 14 chr10 81707127 81707939 -58608826 - L1P LINE L1 -866 5280 4475 230 293 112 26 chr10 81708448 81708564 -58608201 - L3 LINE CR1 -2 1575 1450 319 344 0 0 chr10 81708727 81708820 -58607945 - FLAM_A SINE Alu -1 132 40 501 275 19 18 chr10 81708833 81709124 -58607641 + CT-rich Low_complexity Low_complexity 1 291 0 231 345 0 0 chr10 81709125 81709180 -58607585 + polypyrimidine Low_complexity Low_complexity 4 58 0 435 239 11 33 chr10 81709182 81709366 -58607399 + CT-rich Low_complexity Low_complexity 1 180 0 581 222 0 0 chr10 81709641 81709749 -58607016 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3183 134 36 10 chr10 81709740 81710324 -58606441 + Tigger3(Golem) DNA MER2_type 2277 2875 -154 1456 167 44 44 chr10 81710373 81710667 -58606098 + THE1C LTR MaLR 1 294 -81 1135 255 98 19 chr10 81711126 81711503 -58605262 - MLT1I LTR MaLR -2 407 1 245 262 24 0 chr10 81712117 81712201 -58604564 + L1MCc LINE L1 25 110 -6313 268 311 32 64 chr10 81712339 81712590 -58604175 + L1MCc LINE L1 59 301 -6122 337 268 71 30 chr10 81713028 81713196 -58603569 + L1MCc LINE L1 1129 1303 -5120 307 273 116 8 chr10 81713581 81713702 -58603063 + L1MCc LINE L1 1552 1685 -5437 361 301 130 25 chr10 81713933 81714138 -58602627 - MIR SINE MIR -28 234 11 501 275 110 20 chr10 81714769 81714969 -58601796 + L2 LINE L2 3084 3301 -12 1350 251 87 29 chr10 81715785 81716304 -58600461 - MLT1H LTR MaLR 0 549 1 475 66 0 0 chr10 81716769 81716830 -58599935 - THE1A LTR MaLR -294 61 1 7903 100 2 1 chr10 81716830 81717871 -58598894 - THE1A-int LTR MaLR 0 1580 539 19383 25 0 0 chr10 81718028 81720926 -58595839 + L1PA2 LINE L1 3133 6031 -124 234 302 0 0 chr10 81720941 81720984 -58595781 + G-rich Low_complexity Low_complexity 1 43 0 10075 53 20 35 chr10 81721692 81723099 -58593666 + SVA Other Other 1 1386 0 1224 102 0 0 chr10 81723099 81723266 -58593499 + AluSg/x SINE Alu 133 299 -13 2356 152 85 52 chr10 81723305 81723379 -58593386 - MLT1D LTR MaLR 0 505 435 2199 96 3 0 chr10 81723379 81723680 -58593085 + AluSg SINE Alu 1 302 -8 2356 152 85 52 chr10 81723680 81724087 -58592678 - MLT1D LTR MaLR -70 435 8 3021 164 58 35 chr10 81724113 81724323 -58592442 + LTR26E LTR ERV1 1 205 -417 2154 98 3 0 chr10 81724323 81724618 -58592147 + AluSx SINE Alu 1 296 -16 3021 164 58 35 chr10 81724618 81725015 -58591750 + LTR26E LTR ERV1 205 622 0 455 48 0 0 chr10 81725015 81725078 -58591687 + L1PB1 LINE L1 6087 6149 -2 366 341 51 9 chr10 81725239 81725453 -58591312 - MIR SINE MIR 0 262 40 434 179 26 33 chr10 81725599 81725721 -58591044 + MIR SINE MIR 89 208 -54 244 346 20 0 chr10 81725791 81725892 -58590873 + MIR3 SINE MIR 89 191 -17 723 203 92 0 chr10 81726436 81726599 -58590166 + MIR SINE MIR 64 241 -21 465 19 0 0 chr10 81727231 81727285 -58589480 + (CA)n Simple_repeat Simple_repeat 1 54 0 505 222 0 0 chr10 81727688 81727787 -58588978 + MIR SINE MIR 46 144 -118 191 210 21 203 chr10 81727798 81727879 -58588886 + MIR SINE MIR 122 168 -94 2188 88 3 7 chr10 81727879 81728175 -58588590 + AluSq SINE Alu 1 295 -18 191 210 21 203 chr10 81728175 81728236 -58588529 + MIR SINE MIR 168 238 -24 278 257 122 0 chr10 81728254 81728328 -58588437 + L2 LINE L2 3190 3272 0 223 348 0 0 chr10 81728379 81728448 -58588317 + MIR SINE MIR 175 243 -19 1720 144 7 24 chr10 81729757 81730055 -58586710 + AluJo SINE Alu 1 293 -19 465 315 89 5 chr10 81731549 81731752 -58585013 + MIR SINE MIR 2 221 -41 1007 58 0 109 chr10 81732787 81732943 -58583822 + AluY SINE Alu 1 139 -172 5430 27 0 2 chr10 81732949 81733569 -58583196 + L1PA4 LINE L1 5456 6074 -81 249 266 31 0 chr10 81733700 81733764 -58583001 + MIR SINE MIR 193 258 -4 44240 29 21 1 chr10 81734081 81740110 -58576655 - L1PA2 LINE L1 -1 6154 2 271 279 0 90 chr10 81740120 81740242 -58576523 - MIR3 SINE MIR -1 207 97 401 268 21 0 chr10 81740545 81740642 -58576123 - MIR3 SINE MIR -43 165 67 369 0 0 0 chr10 81740981 81741022 -58575743 + (CA)n Simple_repeat Simple_repeat 2 42 0 2168 107 7 0 chr10 81742257 81742565 -58574200 - AluSx SINE Alu -2 310 1 1507 210 0 7 chr10 81743100 81743400 -58573365 + AluJo SINE Alu 1 298 -14 625 73 0 10 chr10 81743403 81743499 -58573266 + L1PB1 LINE L1 6056 6150 -1 39 22 0 0 chr10 81743499 81743545 -58573220 + AT_rich Low_complexity Low_complexity 1 46 0 320 272 66 44 chr10 81743969 81744105 -58572660 + MIR SINE MIR 26 164 -98 327 291 10 10 chr10 81744484 81744587 -58572178 + LTR67 LTR ERVL 434 536 -21 1158 109 239 17 chr10 81744771 81745009 -58571756 - AluSg1 SINE Alu -18 291 1 475 270 129 30 chr10 81745187 81745420 -58571345 - MIR SINE MIR 0 262 7 192 107 0 0 chr10 81745606 81745634 -58571131 - MIR SINE MIR -148 60 33 504 242 78 20 chr10 81746884 81747035 -58569730 + MER115 DNA AcHobo 5 164 -529 537 263 46 0 chr10 81747035 81747187 -58569578 + MER3 DNA MER1_type 1 159 -50 190 269 37 112 chr10 81747361 81747603 -58569162 + L2 LINE L2 2836 3059 -213 2032 118 0 10 chr10 81747745 81748034 -58568731 + AluSg SINE Alu 1 286 -24 2049 119 0 0 chr10 81748363 81748657 -58568108 + AluSx SINE Alu 1 294 -18 624 208 44 0 chr10 81748698 81748714 -58568051 + MER5A DNA MER1_type 1 23 -166 213 327 95 24 chr10 81748714 81748882 -58567883 - MER5A DNA MER1_type -2 187 8 249 231 108 0 chr10 81750136 81750201 -58566564 + MIR SINE MIR 79 150 -112 194 260 0 0 chr10 81750311 81750361 -58566404 + MIR SINE MIR 148 197 -65 480 269 16 9 chr10 81751172 81751305 -58565460 - MIR SINE MIR -58 150 24 1638 164 0 35 chr10 81751305 81751615 -58565150 + AluJo SINE Alu 1 299 -13 480 269 16 9 chr10 81751615 81751634 -58565131 - MIR SINE MIR -184 24 7 972 113 0 0 chr10 81751720 81751853 -58564912 + AluSq/x SINE Alu 1 133 -179 213 39 0 0 chr10 81751854 81751880 -58564885 + (TCTCCC)n Simple_repeat Simple_repeat 1 26 0 537 294 34 39 chr10 81751895 81752099 -58564666 + MIR SINE MIR 47 249 -13 1472 175 3 26 chr10 81752117 81752420 -58564345 - AluSc SINE Alu -3 296 1 1478 183 17 7 chr10 81753098 81753387 -58563378 + AluJb SINE Alu 1 292 -20 2294 86 0 0 chr10 81753555 81753858 -58562907 - AluY SINE Alu -8 303 1 1589 158 26 53 chr10 81753861 81754165 -58562600 - AluJo SINE Alu -16 296 1 2410 109 0 0 chr10 81754170 81754473 -58562292 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 81754478 81754499 -58562266 + AT_rich Low_complexity Low_complexity 1 21 0 319 320 97 3 chr10 81754801 81754953 -58561812 - MIR3 SINE MIR -32 176 8 2052 139 7 10 chr10 81755480 81755781 -58560984 + AluSx SINE Alu 2 301 -11 1032 254 101 7 chr10 81755790 81756195 -58560570 + L1M4 LINE L1 4377 4819 -1327 463 120 15 150 chr10 81756193 81756326 -58560439 + L1ME2 LINE L1 5928 6042 -122 * 585 230 0 20 chr10 81756318 81756470 -58560295 + L1ME2 LINE L1 6002 6150 -14 564 267 62 19 chr10 81756471 81756681 -58560084 - MLT1K LTR MaLR -280 308 90 180 305 34 59 chr10 81757610 81757657 -58559108 - MIR3 SINE MIR -92 116 69 2952 85 63 35 chr10 81757657 81757982 -58558783 + MER101 LTR ERV1 2 345 -129 2179 138 0 0 chr10 81757982 81758279 -58558486 + AluJo SINE Alu 1 297 -15 2952 85 63 35 chr10 81758279 81758413 -58558352 + MER101 LTR ERV1 345 474 0 180 305 34 59 chr10 81758413 81758483 -58558282 - MIR3 SINE MIR -139 69 2 705 238 78 26 chr10 81759070 81759263 -58557502 + MIR SINE MIR 40 242 -20 1598 173 46 21 chr10 81759416 81759529 -58557236 + AluJb SINE Alu 1 110 -202 2408 112 8 17 chr10 81759529 81759887 -58556878 + THE1A LTR MaLR 1 355 0 1598 173 46 21 chr10 81759887 81759902 -58556863 + AluJb SINE Alu 110 123 -189 207 0 0 0 chr10 81759902 81759925 -58556840 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1598 173 46 21 chr10 81759925 81760079 -58556686 + AluJb SINE Alu 123 291 -21 546 269 19 13 chr10 81760095 81760251 -58556514 + MIR SINE MIR 34 190 -72 2267 127 3 0 chr10 81760312 81760620 -58556145 - AluSx SINE Alu -3 309 1 423 236 11 25 chr10 81760844 81760965 -58555800 + MLT1I LTR MaLR 27 135 -274 371 228 40 0 chr10 81760977 81761078 -58555687 + MLT1I LTR MaLR 303 407 -2 2076 133 8 61 chr10 81761366 81761741 -58555024 - THE1A LTR MaLR 0 355 1 12144 99 1 0 chr10 81761741 81763319 -58553446 - THE1A-int LTR MaLR 0 1580 1 2064 133 21 56 chr10 81763319 81763696 -58553069 - THE1B LTR MaLR 0 364 1 1731 189 14 82 chr10 81763791 81764305 -58552460 - MLT1D LTR MaLR -4 501 23 1868 157 37 3 chr10 81764322 81764616 -58552149 - AluJo SINE Alu -8 304 1 1168 136 15 29 chr10 81764743 81764949 -58551816 - THE1C LTR MaLR -2 373 171 31473 98 14 59 chr10 81764975 81766795 -58549970 - L1PA7 LINE L1 -1 6153 4254 2827 10 0 3 chr10 81766795 81767101 -58549664 - AluYa5 SINE Alu -6 305 1 31473 98 14 59 chr10 81767101 81768489 -58548276 - L1PA7 LINE L1 -1900 4254 2806 2100 115 31 0 chr10 81768489 81768775 -58547990 - AluSg1 SINE Alu -10 299 5 31473 98 14 59 chr10 81768775 81771997 -58544768 - L1PA7 LINE L1 -3348 2806 14 1252 92 31 25 chr10 81771997 81772193 -58544572 - THE1C LTR MaLR -178 197 1 1378 149 37 40 chr10 81772365 81772688 -58544077 - MER33 DNA MER1_type 0 324 3 1770 174 10 23 chr10 81772821 81773126 -58543639 - AluJb SINE Alu -11 301 1 283 194 32 129 chr10 81773348 81773472 -58543293 - L1ME LINE L1 -419 5702 5591 2416 81 0 7 chr10 81774611 81774918 -58541847 + AluSx SINE Alu 3 307 -5 1363 197 4 0 chr10 81775030 81775279 -58541486 + MER47A DNA MER2_type 1 250 -116 2030 148 0 3 chr10 81775279 81775576 -58541189 + AluJb SINE Alu 1 296 -16 667 363 71 19 chr10 81776409 81776820 -58539945 + L2 LINE L2 2837 3268 -4 243 0 0 0 chr10 81777139 81777166 -58539599 + (T)n Simple_repeat Simple_repeat 1 27 0 1510 72 5 0 chr10 81777456 81777651 -58539114 + L1PA7 LINE L1 5958 6153 -1 29 28 0 0 chr10 81777689 81777725 -58539040 + AT_rich Low_complexity Low_complexity 1 36 0 2553 69 0 0 chr10 81778646 81778952 -58537813 + AluY SINE Alu 1 306 -5 261 0 0 0 chr10 81780139 81780168 -58536597 + (CA)n Simple_repeat Simple_repeat 2 30 0 1350 176 75 103 chr10 81780230 81780312 -58536453 + Charlie4a DNA MER1_type 16 99 -1862 2231 75 38 7 chr10 81780312 81780605 -58536160 - AluSp SINE Alu -11 302 1 1350 176 75 103 chr10 81780605 81781027 -58535738 + Charlie4a DNA MER1_type 99 506 -2 903 129 7 14 chr10 81781406 81781545 -58535220 + AluJo SINE Alu 1 138 -174 1877 153 3 17 chr10 81781546 81781841 -58534924 + AluJo SINE Alu 1 291 -21 360 253 91 10 chr10 81781842 81781941 -58534824 + L1MC4 LINE L1 6614 6720 -1322 316 255 53 32 chr10 81781868 81781962 -58534803 - L1MC4 LINE L1 -1333 6709 6614 * 1168 158 0 0 chr10 81781987 81782164 -58534601 + AluJo SINE Alu 134 310 -2 597 138 11 0 chr10 81782588 81782682 -58534083 - FLAM_A SINE Alu -2 140 46 1093 136 19 0 chr10 81782805 81782967 -58533798 - AluSc SINE Alu -10 299 135 390 273 103 41 chr10 81782981 81783248 -58533517 - MLT1K LTR MaLR -15 573 318 315 177 25 25 chr10 81783298 81783377 -58533388 - MLT1K LTR MaLR -375 213 135 2224 116 0 0 chr10 81783781 81784074 -58532691 + AluSg SINE Alu 1 293 -17 226 304 191 0 chr10 81784086 81784201 -58532564 + MIR3 SINE MIR 43 179 -29 534 199 93 107 chr10 81784352 81784568 -58532197 - L2 LINE L2 -2 3311 3099 * 686 267 157 29 chr10 81784557 81785047 -58531718 - L2 LINE L2 -417 2897 2345 212 256 0 90 chr10 81785280 81785358 -58531407 + MIR3 SINE MIR 112 182 -26 3141 170 60 26 chr10 81786231 81786897 -58529868 + L1MB7 LINE L1 5339 6029 -155 2070 122 7 13 chr10 81786897 81787200 -58529565 - AluSx SINE Alu -11 301 1 3141 170 60 26 chr10 81787200 81787244 -58529521 + L1MB7 LINE L1 6029 6070 -114 1041 177 62 66 chr10 81787248 81787474 -58529291 + AluJo SINE Alu 51 275 -37 727 173 8 0 chr10 81787482 81787615 -58529150 + L1MB7 LINE L1 6046 6179 -5 203 302 16 0 chr10 81787935 81787998 -58528767 + GA-rich Low_complexity Low_complexity 4 67 0 396 298 24 24 chr10 81788163 81788331 -58528434 + MLT1J2 LTR MaLR 1 168 -282 436 226 38 0 chr10 81788381 81788487 -58528278 - MER96 DNA MER1_type? -63 112 3 254 339 38 22 chr10 81788532 81788715 -58528050 + MLT1L LTR MaLR 430 615 0 212 375 31 0 chr10 81788942 81789038 -58527727 + MIR SINE MIR 24 122 -140 2262 101 17 0 chr10 81789213 81789510 -58527255 - AluSg SINE Alu -8 302 1 394 309 13 33 chr10 81790052 81790204 -58526561 - MIR3 SINE MIR -15 193 45 1048 149 21 46 chr10 81790780 81790844 -58525921 - MER5A DNA MER1_type 0 189 125 1830 92 78 35 chr10 81790844 81791126 -58525639 + AluSq SINE Alu 1 294 -19 1048 149 21 46 chr10 81791126 81791255 -58525510 - MER5A DNA MER1_type -64 125 1 757 201 63 17 chr10 81791353 81791455 -58525310 + MIR SINE MIR 78 193 -69 2184 97 13 36 chr10 81791455 81791763 -58525002 + AluSx SINE Alu 1 301 -11 757 201 63 17 chr10 81791763 81791834 -58524931 + MIR SINE MIR 193 259 -3 220 259 0 19 chr10 81791911 81791965 -58524800 - L3 LINE CR1 -9 1568 1516 391 202 26 61 chr10 81792007 81792096 -58524669 + MER5A DNA MER1_type 39 125 -64 2201 117 10 0 chr10 81792096 81792387 -58524378 - AluSx SINE Alu -18 294 1 391 202 26 61 chr10 81792387 81792411 -58524354 + MER5A DNA MER1_type 125 148 -41 1513 133 0 5 chr10 81792411 81792629 -58524136 + AluSg/x SINE Alu 83 299 -11 275 372 8 25 chr10 81792683 81792804 -58523961 - MIR SINE MIR -71 137 19 2185 94 10 3 chr10 81792823 81793111 -58523654 + AluSp SINE Alu 1 290 -23 181 346 65 28 chr10 81793122 81793229 -58523536 - L3 LINE CR1 -34 1543 1433 246 315 0 0 chr10 81793314 81793387 -58523378 + L2 LINE L2 2779 2851 -463 1150 168 254 6 chr10 81793912 81794258 -58522507 - Tigger7 DNA MER2_type 0 2487 2056 182 229 125 0 chr10 81794482 81794530 -58522235 + L2 LINE L2 3200 3253 -19 248 299 80 0 chr10 81794647 81794760 -58522005 + MIR SINE MIR 7 129 -79 2411 70 7 0 chr10 81794807 81795094 -58521671 + AluY SINE Alu 1 289 -22 358 239 73 28 chr10 81795926 81796035 -58520730 - Charlie8 DNA MER1_type -2216 201 88 219 69 0 0 chr10 81796360 81796389 -58520376 + (CATCC)n Simple_repeat Simple_repeat 3 31 0 604 160 92 34 chr10 81796980 81797099 -58519666 + AluJo/FLAM SINE Alu 2 127 -175 289 194 57 40 chr10 81797102 81797195 -58519570 - AluJ/FLAM SINE Alu -215 87 7 1490 198 65 0 chr10 81799178 81799456 -58517309 + AluJb SINE Alu 1 296 -16 24 32 0 0 chr10 81799539 81799570 -58517195 + AT_rich Low_complexity Low_complexity 1 31 0 366 68 305 0 chr10 81799946 81800005 -58516760 - MADE1 DNA Mariner -3 77 1 207 0 0 0 chr10 81800186 81800209 -58516556 + (A)n Simple_repeat Simple_repeat 1 23 0 332 309 20 46 chr10 81801356 81801508 -58515257 + L2 LINE L2 2934 3081 -232 2158 116 0 10 chr10 81801508 81801802 -58514963 + AluSg SINE Alu 1 291 -19 180 238 267 20 chr10 81801927 81802028 -58514737 + L2 LINE L2 3173 3298 -15 953 197 27 49 chr10 81803014 81803237 -58513528 - MER20 DNA MER1_type 0 219 2 2293 86 6 6 chr10 81804811 81804931 -58511834 + AluSq SINE Alu 1 120 -193 189 0 0 0 chr10 81804931 81804952 -58511813 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2293 86 6 6 chr10 81804952 81805144 -58511621 + AluSq SINE Alu 119 313 0 2262 108 3 6 chr10 81805160 81805474 -58511291 + AluSq SINE Alu 1 313 0 1596 157 13 23 chr10 81805622 81805928 -58510837 - AluSx SINE Alu -9 303 1 1481 148 16 0 chr10 81806520 81806776 -58509989 + AluSx SINE Alu 35 294 -18 1621 161 16 20 chr10 81806809 81807139 -58509626 + AluJo SINE Alu 5 312 0 802 169 0 22 chr10 81807162 81807298 -58509467 + FLAM_C SINE Alu 1 133 0 1906 133 3 26 chr10 81807388 81807696 -58509069 + AluSx SINE Alu 1 301 -11 837 303 92 36 chr10 81809667 81810242 -58506523 + L2 LINE L2 1794 2400 -914 608 314 241 10 chr10 81810230 81810666 -58506099 - L2 LINE L2 0 3313 2778 * 1114 93 0 7 chr10 81810685 81810836 -58505929 + AluY SINE Alu 1 150 -161 2067 106 0 26 chr10 81810862 81811165 -58505600 - AluSg SINE Alu -15 295 1 1742 137 28 0 chr10 81811827 81812111 -58504654 - AluSx SINE Alu -20 292 1 376 269 56 81 chr10 81813785 81813982 -58502783 + L1MC5 LINE L1 7552 7743 -218 373 235 0 20 chr10 81814007 81814109 -58502656 + L1MC5 LINE L1 7808 7907 -54 2063 112 17 3 chr10 81814110 81814406 -58502359 - AluSx SINE Alu -12 300 1 841 191 6 6 chr10 81814436 81814593 -58502172 - FAM SINE Alu -17 168 12 1278 190 16 45 chr10 81815070 81815219 -58501546 + AluJo SINE Alu 1 138 -174 2025 132 0 0 chr10 81815219 81815514 -58501251 + AluSx SINE Alu 5 299 -13 1278 190 16 45 chr10 81815514 81815674 -58501091 + AluJo SINE Alu 138 301 -11 34 0 0 0 chr10 81815806 81815840 -58500925 + AT_rich Low_complexity Low_complexity 1 34 0 1454 152 10 76 chr10 81815944 81816246 -58500519 + AluJb SINE Alu 16 297 -15 348 153 93 85 chr10 81816594 81816682 -58500083 - MER104 DNA Tc2 -1721 177 86 1619 174 17 7 chr10 81816682 81816976 -58499789 + AluJb SINE Alu 5 301 -11 348 153 93 85 chr10 81816976 81817005 -58499760 - MER104 DNA Tc2 -1812 86 59 1885 136 0 0 chr10 81817005 81817284 -58499481 + AluSg SINE Alu 1 279 -31 427 152 95 0 chr10 81817403 81817508 -58499257 - L1M4 LINE L1 -841 5305 5191 2011 113 0 0 chr10 81817512 81817819 -58498946 - AluSx SINE Alu 0 307 1 350 276 97 30 chr10 81817883 81818017 -58498748 - MIR SINE MIR 0 262 120 330 293 162 69 chr10 81817996 81818363 -58498402 + L3 LINE CR1 947 1375 -202 * 2003 131 3 6 chr10 81818363 81818676 -58498089 + AluSq SINE Alu 1 312 -1 330 293 162 69 chr10 81818676 81818814 -58497951 + L3 LINE CR1 1375 1499 -78 1900 198 80 2 chr10 81819184 81819673 -58497092 - L1MB2 LINE L1 -55 6116 5555 180 246 46 62 chr10 81819809 81819874 -58496891 - L3 LINE CR1 -228 1349 1286 2145 137 40 0 chr10 81820221 81820571 -58496194 - THE1B LTR MaLR 0 364 1 288 195 17 119 chr10 81820957 81821075 -58495690 + Charlie8 DNA MER1_type 56 161 -2256 269 333 98 11 chr10 81821461 81821635 -58495130 + MIR SINE MIR 65 253 -9 523 181 176 33 chr10 81922305 81922487 -58394278 - MER5C DNA MER1_type -92 232 25 2240 113 0 7 chr10 81922571 81922873 -58393892 - AluSx SINE Alu -12 300 1 1889 122 15 0 chr10 81923320 81923583 -58393182 - AluSx SINE Alu -15 297 31 4741 120 33 29 chr10 81923584 81925104 -58391661 + pTR5 LTR ERV1 1 2438 0 488 106 0 0 chr10 81925107 81925173 -58391592 - AluS SINE Alu -246 67 2 211 365 113 0 chr10 81925310 81925425 -58391340 + MIR3 SINE MIR 4 131 -77 409 283 169 0 chr10 81925671 81925837 -58390928 - MIR SINE MIR -19 243 50 330 248 40 16 chr10 81926014 81926139 -58390626 + L1MC5 LINE L1 7107 7234 -727 2328 60 20 7 chr10 81926235 81926535 -58390230 + AluY SINE Alu 1 304 -7 994 210 122 100 chr10 81926583 81927192 -58389573 + L1MC5 LINE L1 7292 7913 -48 953 184 31 15 chr10 81927465 81927661 -58389104 - AluJo SINE Alu -113 199 1 233 259 37 37 chr10 81928077 81928158 -58388607 + L2 LINE L2 3138 3218 -54 2044 116 14 0 chr10 81928162 81928438 -58388327 + AluSx SINE Alu 1 280 -32 22 0 0 0 chr10 81928757 81928779 -58387986 + AT_rich Low_complexity Low_complexity 1 22 0 2234 108 3 25 chr10 81929916 81930231 -58386534 - AluSp SINE Alu -5 308 1 1815 148 14 3 chr10 81930602 81930893 -58385872 - AluSx SINE Alu -18 294 1 1837 247 91 37 chr10 81930963 81931770 -58384995 - L1M4 LINE L1 -2271 3875 3026 776 244 21 0 chr10 81931756 81931949 -58384816 + L1M4 LINE L1 2680 2876 -3270 * 538 242 22 11 chr10 81931958 81932140 -58384625 - L1M4 LINE L1 -3113 3033 2850 2077 115 14 3 chr10 81932359 81932647 -58384118 + AluSq SINE Alu 1 291 -22 2084 152 3 44 chr10 81933022 81933223 -58383542 - MLT1A1 LTR MaLR -19 346 165 2388 76 7 0 chr10 81933223 81933525 -58383240 - AluSp SINE Alu -9 304 1 2084 152 3 44 chr10 81933525 81933684 -58383081 - MLT1A1 LTR MaLR -200 165 1 923 211 87 19 chr10 81934112 81934377 -58382388 + L1MEc LINE L1 318 600 -5796 2086 94 19 36 chr10 81934439 81934746 -58382019 + AluSx SINE Alu 1 302 -10 533 134 0 31 chr10 81934816 81934913 -58381852 + L1MA4 LINE L1 6196 6289 -11 620 88 0 0 chr10 81935061 81935141 -58381624 + MADE1 DNA Mariner 1 80 0 5256 109 15 12 chr10 81937107 81937849 -58378916 - L1PA15 LINE L1 -4 6161 5418 1835 157 4 0 chr10 81937860 81938161 -58378604 - AluJb SINE Alu 0 302 1 1277 210 57 82 chr10 81938766 81939016 -58377749 - MLT1C LTR MaLR 0 467 233 2130 124 10 3 chr10 81939016 81939322 -58377443 - AluSx SINE Alu -4 308 1 1277 210 57 82 chr10 81939322 81939547 -58377218 - MLT1C LTR MaLR -234 233 4 1669 178 7 11 chr10 81939642 81939929 -58376836 + AluJo SINE Alu 1 286 -26 2221 84 37 0 chr10 81940422 81940720 -58376045 - AluSc SINE Alu 0 309 1 415 219 125 8 chr10 81941608 81941736 -58375029 - MER96B DNA MER1_type? -233 184 42 656 136 0 27 chr10 81941861 81941971 -58374794 + FLAM_C SINE Alu 35 141 -2 591 210 122 18 chr10 81941975 81942204 -58374561 + L1M4 LINE L1 2946 3198 -2948 * 745 197 71 10 chr10 81942186 81942384 -58374381 + L1MC3 LINE L1 7576 7785 0 199 184 53 0 chr10 81942984 81943022 -58373743 + MIR SINE MIR 119 158 -104 1996 111 18 0 chr10 81943062 81943374 -58373391 + AluSx SINE Alu 1 317 0 209 283 29 109 chr10 81943645 81943736 -58373029 + MIR SINE MIR 21 99 -163 1688 177 0 26 chr10 81943736 81944047 -58372718 - AluJb SINE Alu -9 303 1 209 283 29 109 chr10 81944047 81944093 -58372672 + MIR SINE MIR 99 147 -115 275 163 0 0 chr10 81944595 81944638 -58372127 - Alu SINE Alu -265 43 1 2097 111 10 7 chr10 81945187 81945475 -58371290 - AluSx SINE Alu -23 289 1 2367 156 61 0 chr10 82050084 82050475 -58266290 + MSTA LTR MaLR 2 416 -12 399 271 107 8 chr10 82051166 82051288 -58265477 - MIR3 SINE MIR -46 162 29 255 152 0 0 chr10 82051477 82051523 -58265242 + (TG)n Simple_repeat Simple_repeat 2 47 0 282 271 52 26 chr10 82051871 82051887 -58264878 - L1MA10 LINE L1 -1 6333 6318 827 223 145 8 chr10 82051887 82052129 -58264636 - L1ME2 LINE L1 -9 6155 5881 866 148 218 45 chr10 82052355 82052598 -58264167 + LTR12 LTR ERV1 1 285 -429 267 227 0 40 chr10 82052599 82052674 -58264091 + LTR30 LTR ERV1 553 624 -98 665 140 0 0 chr10 82052682 82052782 -58263983 + LTR12 LTR ERV1 615 714 0 1628 146 0 85 chr10 82053059 82053387 -58263378 + AluJo SINE Alu 1 300 -12 1799 204 27 85 chr10 82053786 82054274 -58262491 + MLT2B1 LTR ERVL 15 473 -47 207 0 0 0 chr10 82054274 82054297 -58262468 + (CA)n Simple_repeat Simple_repeat 2 24 0 1799 204 27 85 chr10 82054297 82054324 -58262441 + MLT2B1 LTR ERVL 473 500 -20 1281 230 124 57 chr10 82054466 82054591 -58262174 + L1MCc LINE L1 44 159 -6264 2234 86 3 7 chr10 82054591 82054894 -58261871 + AluSx SINE Alu 1 302 -10 1281 230 124 57 chr10 82054894 82055242 -58261523 + L1MCc LINE L1 159 549 -5874 262 308 26 43 chr10 82055311 82055428 -58261337 + L1MCc LINE L1 655 769 -5654 1740 248 159 35 chr10 82055440 82055783 -58260982 + L1MCc LINE L1 867 1166 -5775 2451 117 28 58 chr10 82055783 82056210 -58260555 - MLT2D LTR ERVL 0 414 1 1740 248 159 35 chr10 82056210 82056794 -58259971 + L1MCc LINE L1 1166 1676 -5265 240 35 0 0 chr10 82056794 82056823 -58259942 + (CA)n Simple_repeat Simple_repeat 1 29 0 1740 248 159 35 chr10 82056823 82057004 -58259761 + L1MCc LINE L1 1676 1833 -5108 576 90 20 60 chr10 82057004 82057104 -58259661 - L1MA1 LINE L1 0 6302 6207 1740 248 159 35 chr10 82057104 82057446 -58259319 + L1MCc LINE L1 1833 2131 -4810 1136 71 0 13 chr10 82057446 82057601 -58259164 + L1PA8 LINE L1 6020 6172 0 1740 248 159 35 chr10 82057601 82057809 -58258956 + L1MCc LINE L1 2131 2740 -4201 2209 169 50 25 chr10 82057834 82057898 -58258867 - MLT1D LTR MaLR -3 502 441 2053 115 0 0 chr10 82057898 82058218 -58258547 + AluSg1 SINE Alu 1 309 0 2209 169 50 25 chr10 82058218 82058591 -58258174 - MLT1D LTR MaLR -64 441 54 388 234 18 63 chr10 82058593 82058704 -58258061 + L1MCc LINE L1 2908 3013 -4109 899 261 19 29 chr10 82058716 82059179 -58257586 + L1MEc LINE L1 2040 2451 -3764 834 151 8 0 chr10 82059179 82059305 -58257460 + AluJb SINE Alu 6 132 -180 7465 229 77 31 chr10 82059308 82060958 -58255807 + L1MEc LINE L1 2436 4245 -1970 1481 171 6 70 chr10 82060958 82061274 -58255491 - AluJb SINE Alu -16 296 1 7465 229 77 31 chr10 82061274 82062151 -58254614 + L1MEc LINE L1 4245 5081 -1134 979 188 14 9 chr10 82062158 82062371 -58254394 + AluJo SINE Alu 96 309 -3 248 243 14 0 chr10 82062371 82062445 -58254320 + L1MEc LINE L1 5065 5139 -1076 253 231 19 0 chr10 82062449 82062501 -58254264 - L1M4 LINE L1 -2050 4096 4044 * 2687 181 50 20 chr10 82062476 82063182 -58253583 + L1MB8 LINE L1 5120 5847 -400 1969 182 42 24 chr10 82063282 82063706 -58253059 + L1MB8 LINE L1 5816 6247 0 2328 129 43 3 chr10 82063713 82064063 -58252702 + MER47A DNA MER2_type 2 365 -1 1025 184 25 25 chr10 82064373 82064532 -58252233 - AluJo SINE Alu -27 285 124 218 0 94 0 chr10 82064532 82064564 -58252201 + T-rich Low_complexity Low_complexity 2 36 0 1025 184 25 25 chr10 82064564 82064605 -58252160 - AluJo SINE Alu -187 125 85 2028 121 3 13 chr10 82064612 82064942 -58251823 - AluSq SINE Alu 0 313 1 397 233 0 16 chr10 82065513 82065642 -58251123 - LTR41 LTR ERVL 0 773 647 355 147 0 0 chr10 82065635 82065703 -58251062 + LTR5 LTR ERVK 737 804 -165 * 412 268 109 7 chr10 82065720 82065858 -58250907 - LTR41 LTR ERVL -621 152 1 599 232 67 18 chr10 82065858 82066082 -58250683 - L1M4b LINE L1 -4069 3069 2835 477 118 26 0 chr10 82066091 82066167 -58250598 + L1M3 LINE L1 5486 5563 -771 364 77 31 0 chr10 82066167 82066232 -58250533 + (TA)n Simple_repeat Simple_repeat 1 67 0 652 253 48 42 chr10 82066236 82066402 -58250363 - AluJo SINE Alu -30 282 116 283 235 12 0 chr10 82066402 82066483 -58250282 - L1M4b LINE L1 -4329 2809 2728 1914 177 27 0 chr10 82066486 82066981 -58249784 - L1M4 LINE L1 -554 5630 5122 1691 286 39 25 chr10 82066974 82067529 -58249236 - L1M4b LINE L1 -6055 804 169 * 698 226 14 0 chr10 82067667 82067813 -58248952 - L1M4b LINE L1 -6710 149 2 506 209 27 9 chr10 82067862 82067972 -58248793 - MER57A LTR ERV1 0 403 292 2428 149 30 0 chr10 82068420 82068817 -58247948 + L1MA6 LINE L1 5892 6300 0 1792 169 0 29 chr10 82068920 82069233 -58247532 + AluJb SINE Alu 1 304 -8 330 132 0 0 chr10 82069408 82069461 -58247304 + (CA)n Simple_repeat Simple_repeat 2 54 0 537 319 80 26 chr10 82070234 82070460 -58246305 - MIR SINE MIR -3 259 22 693 268 24 0 chr10 82071169 82071333 -58245432 + MIR SINE MIR 63 230 -32 403 213 0 49 chr10 82072011 82072363 -58244402 + (TG)n Simple_repeat Simple_repeat 1 334 0 289 299 23 28 chr10 82072366 82072543 -58244222 + (CGTG)n Simple_repeat Simple_repeat 3 178 0 * 499 228 22 22 chr10 82072468 82072648 -58244117 + (TG)n Simple_repeat Simple_repeat 1 180 0 196 207 8 33 chr10 82072712 82072833 -58243932 + (TG)n Simple_repeat Simple_repeat 1 118 0 371 243 6 40 chr10 82072845 82073018 -58243747 + (TG)n Simple_repeat Simple_repeat 1 167 0 381 255 0 43 chr10 82073035 82073219 -58243546 + (TG)n Simple_repeat Simple_repeat 1 176 0 483 217 0 48 chr10 82073245 82073434 -58243331 + (TG)n Simple_repeat Simple_repeat 1 180 0 379 190 2 56 chr10 82073479 82073948 -58242817 + (TG)n Simple_repeat Simple_repeat 1 443 0 183 200 0 0 chr10 82075208 82075243 -58241522 + MIR SINE MIR 54 88 -174 420 280 88 63 chr10 82076330 82076569 -58240196 + Charlie8 DNA MER1_type 1 245 -2172 496 224 109 0 chr10 82076635 82076791 -58239974 + MER5B DNA MER1_type 1 173 -5 24 53 0 0 chr10 82078638 82078676 -58238089 + AT_rich Low_complexity Low_complexity 1 38 0 615 278 15 25 chr10 82080351 82080549 -58236216 - MIR3 SINE MIR -8 200 5 300 263 15 22 chr10 82081522 82081659 -58235106 + (CAGAGA)n Simple_repeat Simple_repeat 3 138 0 277 192 0 0 chr10 82082184 82082236 -58234529 - MIR SINE MIR -62 146 95 563 259 29 35 chr10 82083072 82083242 -58233523 + MIR SINE MIR 38 206 -56 192 331 83 23 chr10 82083416 82083549 -58233216 - L3 LINE CR1 -116 1461 1321 204 306 28 0 chr10 82083872 82083944 -58232821 - MIR SINE MIR -122 140 67 184 295 21 63 chr10 82084211 82084306 -58232459 - L3 LINE CR1 -872 705 615 193 388 8 31 chr10 82084412 82084541 -58232224 + MIR SINE MIR 37 162 -100 372 22 0 0 chr10 82084554 82084599 -58232166 + (TG)n Simple_repeat Simple_repeat 1 45 0 1960 141 3 6 chr10 82084628 82084940 -58231825 - AluSx SINE Alu -1 311 1 1301 149 193 28 chr10 82084945 82085194 -58231571 - AluJo SINE Alu -11 291 2 760 190 33 38 chr10 82085253 82085437 -58231328 + MIR SINE MIR 80 262 0 229 248 58 83 chr10 82086041 82086162 -58230603 + MIR3 SINE MIR 15 132 -76 235 337 91 11 chr10 82087526 82087701 -58229064 + L2 LINE L2 1601 1789 -1525 731 314 111 36 chr10 82088031 82088537 -58228228 + L2 LINE L2 2016 2559 -755 322 353 7 0 chr10 82088742 82088895 -58227870 + L2 LINE L2 2900 3053 -260 768 179 0 15 chr10 82090100 82090234 -58226531 - FLAM_A SINE Alu -1 132 1 1002 306 96 22 chr10 82090241 82090827 -58225938 - L1MC4a LINE L1 -1926 5882 5254 2513 182 14 34 chr10 82090847 82091352 -58225413 - L1MB8 LINE L1 -2 6176 5682 234 175 63 32 chr10 82091355 82091418 -58225347 + Charlie8 DNA MER1_type 57 121 -2296 582 184 184 33 chr10 82091595 82091747 -58225018 + MER5A DNA MER1_type 1 175 -14 524 158 388 24 chr10 82091816 82091981 -58224784 + MIR SINE MIR 9 233 -29 674 309 28 12 chr10 82093215 82093467 -58223298 + MIR SINE MIR 4 259 -3 312 346 9 22 chr10 82093762 82093962 -58222803 - MIR SINE MIR -6 256 61 210 278 56 44 chr10 82094579 82094669 -58222096 - MIR SINE MIR -85 123 33 458 319 7 0 chr10 82094918 82095062 -58221703 + L3 LINE CR1 1422 1566 -11 513 286 54 81 chr10 82095097 82095468 -58221297 + L1ME4a LINE L1 5504 5864 -257 433 318 33 0 chr10 82096374 82096525 -58220240 - MIR SINE MIR -69 193 38 281 167 50 0 chr10 82096645 82096705 -58220060 + MIR3 SINE MIR 94 156 -52 2409 80 0 0 chr10 82097288 82097599 -58219166 - AluY SINE Alu 0 311 1 397 234 86 0 chr10 82097713 82097834 -58218931 - MIR SINE MIR -57 151 22 377 281 33 25 chr10 82097944 82098065 -58218700 - L2 LINE L2 0 3272 3151 205 347 49 21 chr10 82098224 82098368 -58218397 - MIR SINE MIR -25 237 90 262 275 20 47 chr10 82098892 82099041 -58217724 + GA-rich Low_complexity Low_complexity 1 145 0 212 295 0 33 chr10 82100976 82101037 -58215728 + MIR SINE MIR 90 148 -60 458 193 84 2 chr10 82101153 82101308 -58215457 - MIR SINE MIR -68 140 12 500 194 31 0 chr10 82101706 82101804 -58214961 - MIR SINE MIR -125 137 37 449 263 75 6 chr10 82102472 82102632 -58214133 - MER5A DNA MER1_type -18 171 1 497 219 17 0 chr10 82102694 82102813 -58213952 - MIR SINE MIR -55 153 33 215 270 130 17 chr10 82103212 82103327 -58213438 + MIR3 SINE MIR 2 129 -79 263 319 32 0 chr10 82103534 82103628 -58213137 - L2 LINE L2 -35 3237 3141 463 226 7 90 chr10 82103842 82103950 -58212815 + MIR3 SINE MIR 56 149 -59 415 285 112 11 chr10 82103950 82104129 -58212636 + MER117 DNA MER1_type 1 197 0 463 226 7 90 chr10 82104129 82104175 -58212590 + MIR3 SINE MIR 149 197 -11 794 246 220 26 chr10 82105095 82105445 -58211320 + L2 LINE L2 2878 3295 -18 240 293 95 82 chr10 82105525 82106000 -58210765 - L2 LINE L2 -403 2911 2431 395 269 25 7 chr10 82107748 82107900 -58208865 + MIR SINE MIR 1 152 -77 387 217 132 5 chr10 82108263 82108417 -58208348 - MIR SINE MIR -70 192 16 240 280 247 0 chr10 82108711 82108804 -58207961 + MIR SINE MIR 32 147 -61 195 129 0 0 chr10 82108808 82108839 -58207926 + (TG)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr10 82108839 82108864 -58207901 + (GA)n Simple_repeat Simple_repeat 1 25 0 360 312 71 24 chr10 82109752 82109922 -58206843 + MER5B DNA MER1_type 1 178 0 230 200 120 53 chr10 82109922 82109997 -58206768 - MIR3 SINE MIR -48 160 81 199 343 78 10 chr10 82110350 82110452 -58206313 + MIR3 SINE MIR 78 186 -22 225 330 99 0 chr10 82110531 82110622 -58206143 - L3b LINE CR1 -196 1387 1288 384 223 10 68 chr10 82111041 82111144 -58205621 - MER5A DNA MER1_type -84 105 9 220 403 0 17 chr10 82111235 82111354 -58205411 - MIR SINE MIR -64 198 82 285 269 54 21 chr10 82111559 82111652 -58205113 + MIR SINE MIR 30 125 -83 840 203 89 0 chr10 82111763 82111965 -58204800 + MIR SINE MIR 23 242 -20 265 268 0 0 chr10 82112076 82112132 -58204633 - MIR SINE MIR -3 259 204 199 256 195 0 chr10 82112579 82112661 -58204104 + MIR SINE MIR 13 110 -152 216 231 19 0 chr10 82112667 82112719 -58204046 + GA-rich Low_complexity Low_complexity 2 54 0 367 332 30 25 chr10 82113267 82113466 -58203299 - MIR SINE MIR -41 221 22 236 309 105 7 chr10 82113912 82114064 -58202701 - L2 LINE L2 -189 3083 2917 229 250 36 0 chr10 82114073 82114129 -58202636 + (CATG)n Simple_repeat Simple_repeat 1 58 0 184 318 0 0 chr10 82114332 82114376 -58202389 - L2 LINE L2 -19 3253 3210 187 320 110 10 chr10 82114405 82114505 -58202260 - MIR SINE MIR -118 144 35 222 182 0 23 chr10 82114750 82114794 -58201971 - L2 LINE L2 -213 3059 3017 2082 122 22 0 chr10 82115556 82115867 -58200898 + AluSx SINE Alu 1 317 0 766 226 19 38 chr10 82115905 82116117 -58200648 - MIR SINE MIR -33 229 22 187 333 0 16 chr10 82116263 82116326 -58200439 - L2 LINE L2 -3 3269 3208 353 149 15 0 chr10 82116488 82116555 -58200210 + CT-rich Low_complexity Low_complexity 2 69 0 2307 121 0 6 chr10 82116673 82116988 -58199777 - AluSq SINE Alu 0 313 1 630 156 62 129 chr10 82118242 82118332 -58198433 + ORSL DNA AcHobo 1 95 -180 2294 112 0 0 chr10 82118332 82118635 -58198130 + AluSx SINE Alu 1 303 -9 302 0 0 26 chr10 82118635 82118674 -58198091 + (TA)n Simple_repeat Simple_repeat 2 39 0 630 156 62 129 chr10 82118674 82118799 -58197966 + ORSL DNA AcHobo 94 200 -75 2450 104 0 0 chr10 82118799 82119108 -58197657 + AluSx SINE Alu 1 309 -3 630 156 62 129 chr10 82119108 82119146 -58197619 + ORSL DNA AcHobo 200 239 -36 367 310 7 55 chr10 82119261 82119406 -58197359 + L2 LINE L2 3171 3308 -5 226 324 81 0 chr10 82120523 82120597 -58196168 - L1MC3 LINE L1 -1002 6783 6704 809 267 5 5 chr10 82120614 82120816 -58195949 + MIR SINE MIR 20 221 -41 792 191 31 5 chr10 82121427 82121621 -58195144 + L1MB8 LINE L1 1269 1467 -4917 * 3385 224 36 54 chr10 82121610 82122796 -58193969 + L1MB8 LINE L1 2072 3236 -3146 808 238 0 0 chr10 82122796 82122956 -58193809 + FRAM SINE Alu 1 160 -6 3385 224 36 54 chr10 82122956 82123103 -58193662 + L1MB8 LINE L1 3236 3384 -2998 1991 160 56 0 chr10 82123100 82123476 -58193289 + L1MB2 LINE L1 5655 6051 -120 * 670 171 13 13 chr10 82123534 82123686 -58193079 + L1MB3 LINE L1 6030 6181 -2 1533 226 20 25 chr10 82123687 82124364 -58192401 + L1MB8 LINE L1 3367 4046 -2368 2124 122 7 0 chr10 82124364 82124660 -58192105 + AluSx SINE Alu 1 298 -14 1533 226 20 25 chr10 82124660 82124820 -58191945 + L1MB8 LINE L1 4046 6408 -6 482 280 21 0 chr10 82125153 82125296 -58191469 - MIR SINE MIR 0 262 117 356 40 20 0 chr10 82125727 82125777 -58190988 + (CA)n Simple_repeat Simple_repeat 1 51 0 518 293 46 0 chr10 82125958 82126132 -58190633 + MIR SINE MIR 44 225 -37 601 248 92 10 chr10 82127929 82128135 -58188630 + MIR SINE MIR 28 250 -12 288 218 115 13 chr10 82128236 82128314 -58188451 + MIR SINE MIR 65 150 -58 233 253 168 0 chr10 82129566 82129661 -58187104 - MIR SINE MIR -21 241 131 246 252 68 39 chr10 82129677 82129780 -58186985 - MER5A DNA MER1_type -18 171 66 999 152 11 11 chr10 82129780 82129958 -58186807 - L1MB3 LINE L1 -2 6181 6004 282 164 0 0 chr10 82130242 82130297 -58186468 + T-rich Low_complexity Low_complexity 1 55 0 233 196 62 80 chr10 82130690 82130802 -58185963 - MIR3 SINE MIR -21 187 78 1974 139 0 45 chr10 82132106 82132416 -58184349 - AluJb SINE Alu -16 296 1 447 298 32 19 chr10 82132439 82132597 -58184168 - MIR SINE MIR -32 230 71 267 210 16 16 chr10 82134328 82134390 -58182375 - L3 LINE CR1 -109 1468 1407 218 371 43 17 chr10 82134532 82134648 -58182117 - L2 LINE L2 -15 3298 3180 1228 99 12 17 chr10 82134701 82134873 -58181892 + AluSg/x SINE Alu 127 297 -13 440 333 20 15 chr10 82134947 82135148 -58181617 - L2 LINE L2 -214 3058 2857 189 0 0 0 chr10 82135174 82135195 -58181570 + (CA)n Simple_repeat Simple_repeat 2 22 0 189 330 126 39 chr10 82135210 82135313 -58181452 + MIR3 SINE MIR 44 155 -53 217 248 248 10 chr10 82135633 82135734 -58181031 + MIR SINE MIR 17 141 -67 342 0 0 0 chr10 82136143 82136181 -58180584 + (CA)n Simple_repeat Simple_repeat 2 39 0 184 316 18 0 chr10 82136547 82136604 -58180161 + L3 LINE CR1 1371 1428 -149 591 247 26 0 chr10 82136632 82136786 -58179979 + MER103 DNA DNA 2 159 -7 181 259 37 0 chr10 82138138 82138192 -58178573 - MIR SINE MIR -66 142 87 220 338 0 0 chr10 82140099 82140179 -58176586 + (CCGAG)n Simple_repeat Simple_repeat 2 81 0 * 232 245 0 0 chr10 82140120 82140192 -58176573 + (CAGGC)n Simple_repeat Simple_repeat 1 72 0 22 70 0 0 chr10 82140208 82140251 -58176514 + GC_rich Low_complexity Low_complexity 1 43 0 24 67 0 0 chr10 82140508 82140553 -58176212 + GC_rich Low_complexity Low_complexity 1 45 0 27 96 0 0 chr10 82140621 82140704 -58176061 + GC_rich Low_complexity Low_complexity 1 83 0 210 136 68 0 chr10 82140747 82140791 -58175974 + (CCCCG)n Simple_repeat Simple_repeat 5 51 0 285 29 0 0 chr10 82141378 82141412 -58175353 + (TG)n Simple_repeat Simple_repeat 2 35 0 183 80 0 0 chr10 82141860 82141885 -58174880 + (CCCCCG)n Simple_repeat Simple_repeat 5 29 0 296 307 8 24 chr10 82142018 82142145 -58174620 + MIR SINE MIR 29 153 -109 1795 150 8 4 chr10 82142530 82142796 -58173969 + AluJb SINE Alu 13 279 -33 212 267 92 53 chr10 82143555 82143686 -58173079 - MIR3 SINE MIR -54 154 19 215 265 44 29 chr10 82143884 82143952 -58172813 + MIR SINE MIR 85 153 -109 250 302 21 21 chr10 82144776 82144872 -58171893 - MER117 DNA MER1_type -96 101 6 262 75 0 0 chr10 82144934 82144974 -58171791 - MADE1 DNA Mariner 0 80 41 344 131 0 36 chr10 82145014 82145098 -58171667 + (CA)n Simple_repeat Simple_repeat 2 82 0 225 286 104 0 chr10 82145137 82145214 -58171551 - MER91A DNA MER1_type -108 88 4 3600 146 27 69 chr10 82145738 82145937 -58170828 - MER44D DNA MER2_type -1883 704 498 1820 150 3 40 chr10 82145937 82146237 -58170528 + AluJb SINE Alu 1 289 -23 3600 146 27 69 chr10 82146237 82146772 -58169993 - MER44D DNA MER2_type -2089 498 1 314 318 39 19 chr10 82147603 82147757 -58169008 + L2 LINE L2 2897 3053 -219 192 189 132 0 chr10 82147933 82147986 -58168779 + L2 LINE L2 3213 3272 0 236 293 0 13 chr10 82148352 82148427 -58168338 + MLT1I LTR MaLR 334 407 -2 212 301 0 48 chr10 82148427 82148510 -58168255 - MIR3 SINE MIR -32 176 98 246 271 144 72 chr10 82148845 82148950 -58167815 - L1ME3A LINE L1 -204 5966 5870 825 161 87 19 chr10 82148950 82149111 -58167654 - FAM SINE Alu -3 172 1 246 271 144 72 chr10 82149111 82149366 -58167399 - L1ME3A LINE L1 -300 5870 5580 217 293 0 40 chr10 82149474 82149549 -58167216 + MIR SINE MIR 91 162 -100 1634 201 105 12 chr10 82150161 82150560 -58166205 - MER63B DNA MER1_type 0 436 1 22 0 0 0 chr10 82150768 82150790 -58165975 + AT_rich Low_complexity Low_complexity 1 22 0 392 289 76 41 chr10 82150830 82151027 -58165738 - L1ME4a LINE L1 -93 6028 5825 613 291 96 0 chr10 82151091 82151290 -58165475 + MIR SINE MIR 40 257 -5 582 341 61 35 chr10 82151412 82151758 -58165007 + L2 LINE L2 2341 2695 -619 440 218 111 79 chr10 82151763 82151979 -58164786 - MER112 DNA MER1_type -1 259 37 1915 150 7 0 chr10 82151982 82152276 -58164489 + MER1A DNA MER1_type 1 296 -233 438 65 0 0 chr10 82152287 82152349 -58164416 - LTR10D LTR ERV1 -451 62 1 * 1441 89 0 111 chr10 82152349 82152615 -58164150 + MER1A DNA MER1_type 297 532 -1 234 62 0 0 chr10 82152624 82152656 -58164109 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 2362 115 0 0 chr10 82152661 82152965 -58163800 - AluSx SINE Alu -5 307 4 1568 140 18 0 chr10 82153482 82153767 -58162998 + L1MA3 LINE L1 6014 6303 -2 865 111 19 106 chr10 82154099 82154306 -58162459 + MER53 DNA DNA 1 189 0 524 200 80 40 chr10 82154746 82154871 -58161894 - MER94 DNA DNA 0 134 5 22 35 0 0 chr10 82155051 82155080 -58161685 + AT_rich Low_complexity Low_complexity 1 29 0 290 381 77 35 chr10 82155157 82155532 -58161233 + L2 LINE L2 1092 1482 -1832 366 319 125 17 chr10 82155565 82155910 -58160855 + L2 LINE L2 1606 1987 -1327 2135 178 43 17 chr10 82155932 82156347 -58160418 + MSTB LTR MaLR 1 426 0 776 219 141 41 chr10 82156528 82156798 -58159967 - MLT1D LTR MaLR -120 385 89 341 300 40 27 chr10 82157028 82157178 -58159587 - MLT1J LTR MaLR -2 509 358 375 143 24 12 chr10 82157190 82157274 -58159491 + CT-rich Low_complexity Low_complexity 2 86 0 1358 172 14 72 chr10 82157275 82157565 -58159200 - AluJb SINE Alu -39 273 1 292 114 23 0 chr10 82157618 82157662 -58159103 - MLT1J LTR MaLR -200 311 267 499 241 30 8 chr10 82157676 82157809 -58158956 - MLT1J LTR MaLR -351 160 25 2872 256 115 10 chr10 82157878 82157965 -58158800 - L2 LINE L2 -456 2858 2782 195 42 0 0 chr10 82157965 82157989 -58158776 + (GGGAGA)n Simple_repeat Simple_repeat 3 26 0 2872 256 115 10 chr10 82157989 82158841 -58157924 - L2 LINE L2 -532 2782 1820 508 316 101 23 chr10 82158844 82159230 -58157535 - L2 LINE L2 -716 2598 2183 2731 170 20 14 chr10 82159323 82159816 -58156949 + MLT2B2 LTR ERVL 1 496 -19 287 243 118 35 chr10 82159831 82159975 -58156790 - MIR SINE MIR -66 196 41 757 197 22 36 chr10 82160963 82161186 -58155579 + L1M4 LINE L1 5087 5306 -840 1551 187 10 30 chr10 82161188 82161488 -58155277 + AluJo SINE Alu 1 294 -18 953 102 86 0 chr10 82161488 82161616 -58155149 + AluJb SINE Alu 1 139 -173 243 0 0 0 chr10 82161635 82161662 -58155103 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2782 32 3 0 chr10 82161673 82161983 -58154782 + AluY SINE Alu 1 311 0 3878 172 77 24 chr10 82161996 82162263 -58154502 + L1MB7 LINE L1 5271 5522 -662 2063 125 0 25 chr10 82162263 82162583 -58154182 + AluSx SINE Alu 1 312 0 3878 172 77 24 chr10 82162583 82163165 -58153600 + L1MB7 LINE L1 5522 6165 -19 2209 80 56 3 chr10 82163184 82163470 -58153295 + AluSx SINE Alu 1 301 -11 207 282 87 48 chr10 82164681 82164784 -58151981 - MIR SINE MIR -60 148 42 588 362 28 14 chr10 82165221 82165580 -58151185 + L3 LINE CR1 1189 1552 -25 1836 140 19 26 chr10 82165582 82165889 -58150876 + AluJb SINE Alu 1 305 -7 2451 43 0 3 chr10 82166416 82166722 -58150043 - AluY SINE Alu 0 305 1 1995 142 20 7 chr10 82166722 82167017 -58149748 - AluJb SINE Alu -13 299 1 588 266 53 74 chr10 82167099 82167343 -58149422 + LTR16C LTR ERVL 253 491 0 395 255 42 75 chr10 82167381 82167593 -58149172 + MLT1K LTR MaLR 368 572 -16 2130 151 0 0 chr10 82167690 82167995 -58148770 + AluJb SINE Alu 1 305 -7 419 291 190 5 chr10 82168006 82168224 -58148541 + MIR SINE MIR 2 262 0 2260 116 0 0 chr10 82168301 82168593 -58148172 - AluSg SINE Alu -18 292 1 965 253 12 32 chr10 82168695 82168944 -58147821 - MIR SINE MIR -2 260 17 2031 120 14 3 chr10 82169883 82170167 -58146598 + AluSx SINE Alu 1 287 -25 315 0 0 0 chr10 82170167 82170202 -58146563 + (GA)n Simple_repeat Simple_repeat 2 36 0 1704 207 0 3 chr10 82170380 82170685 -58146080 + AluJb SINE Alu 1 304 -8 881 280 49 20 chr10 82171840 82172190 -58144575 + HAL1 LINE L1 2 361 -2146 4613 160 57 10 chr10 82172192 82173110 -58143655 + L1MC3 LINE L1 5646 6606 -1179 1732 121 191 183 chr10 82173119 82173172 -58143593 + L1MC3 LINE L1 6824 6875 -910 378 61 0 0 chr10 82173172 82173221 -58143544 + (CA)n Simple_repeat Simple_repeat 2 50 0 1732 121 191 183 chr10 82173221 82173445 -58143320 + L1MC3 LINE L1 6875 7096 -689 342 264 28 9 chr10 82173445 82173551 -58143214 + MLT1F1 LTR MaLR 36 143 -424 1732 121 191 183 chr10 82173551 82173862 -58142903 + L1MC3 LINE L1 7096 7524 -261 2304 108 0 0 chr10 82173975 82174270 -58142495 + AluSg SINE Alu 1 295 -15 402 314 83 34 chr10 82174605 82174804 -58141961 + HAL1 LINE L1 351 560 -1943 2691 30 3 3 chr10 82174804 82175107 -58141658 + AluSq SINE Alu 1 303 -10 4396 134 24 1 chr10 82175144 82175862 -58140903 + L1MA8 LINE L1 5553 6286 -5 21 0 0 0 chr10 82175863 82175884 -58140881 + AT_rich Low_complexity Low_complexity 1 21 0 1550 186 13 60 chr10 82175886 82176204 -58140561 + AluJo SINE Alu 1 303 -9 991 225 215 27 chr10 82176209 82176399 -58140366 + HAL1 LINE L1 554 707 -1800 315 71 0 0 chr10 82176399 82176441 -58140324 + (CA)n Simple_repeat Simple_repeat 1 42 0 991 225 215 27 chr10 82176441 82176730 -58140035 + HAL1 LINE L1 707 1123 -1384 * 5376 160 28 18 chr10 82176716 82177844 -58138921 + L1MC2 LINE L1 5185 6327 -17 2231 96 3 3 chr10 82177844 82178135 -58138630 + AluSc SINE Alu 1 291 -18 5376 160 28 18 chr10 82178135 82178152 -58138613 + L1MC2 LINE L1 6327 6342 -2 3224 268 57 27 chr10 82178170 82179240 -58137525 + HAL1 LINE L1 1088 2211 -296 315 0 0 0 chr10 82179240 82179275 -58137490 + (TG)n Simple_repeat Simple_repeat 1 35 0 3224 268 57 27 chr10 82179275 82179582 -58137183 + HAL1 LINE L1 2211 2507 0 199 302 198 8 chr10 82179652 82179778 -58136987 - MIR SINE MIR -40 222 73 279 334 98 57 chr10 82180212 82180547 -58136218 - L2 LINE L2 0 3272 2924 926 167 69 0 chr10 82180803 82180977 -58135788 - AluJo SINE Alu -7 305 120 468 0 0 0 chr10 82181232 82181284 -58135481 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 26 30 0 0 chr10 82181855 82181888 -58134877 + AT_rich Low_complexity Low_complexity 1 33 0 1754 174 11 0 chr10 82181897 82182178 -58134587 + AluJo SINE Alu 7 290 -22 910 182 13 7 chr10 82182431 82182585 -58134180 - FRAM SINE Alu -11 155 1 445 180 164 8 chr10 82183117 82183245 -58133520 + MER103 DNA DNA 2 149 -17 348 288 153 8 chr10 82183381 82183499 -58133266 - MER5A DNA MER1_type -48 141 7 300 181 74 31 chr10 82184156 82184248 -58132517 + L1MC4 LINE L1 5894 5992 -174 642 290 47 21 chr10 82184557 82184750 -58132015 - MIR SINE MIR -64 198 1 1084 233 119 27 chr10 82184943 82185312 -58131453 + MLT1I LTR MaLR 1 403 -6 238 271 161 17 chr10 82185350 82185468 -58131297 - L3 LINE CR1 -328 1249 1115 2426 85 7 0 chr10 82185539 82185846 -58130919 - AluY SINE Alu -2 309 1 304 315 22 0 chr10 82186033 82186125 -58130640 + MIR SINE MIR 59 152 -110 352 323 31 8 chr10 82187188 82187318 -58129447 - MIR3 SINE MIR -67 141 9 1724 164 7 3 chr10 82187779 82188065 -58128700 - AluJo SINE Alu -21 291 5 293 241 120 19 chr10 82188329 82188437 -58128328 + MIR3 SINE MIR 46 164 -44 2104 181 64 5 chr10 82189372 82189793 -58126972 - L1MB5 LINE L1 0 6174 5729 230 279 51 13 chr10 82190206 82190285 -58126480 - MIR SINE MIR -67 141 60 440 262 69 116 chr10 82191134 82191409 -58125356 - L2 LINE L2 -32 3281 3020 1238 66 7 0 chr10 82191609 82191761 -58125004 + AluY SINE Alu 146 298 -13 416 314 8 12 chr10 82191846 82191993 -58124772 + MIR SINE MIR 48 196 -12 310 255 103 21 chr10 82192929 82193074 -58123691 + LTR33 LTR ERVL 38 194 -327 380 231 87 12 chr10 82193169 82193342 -58123423 + LTR33 LTR ERVL 328 513 -8 1775 161 59 0 chr10 82193642 82193757 -58123008 + AluJb SINE Alu 1 108 -204 913 59 30 0 chr10 82193757 82193892 -58122873 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 1775 161 59 0 chr10 82193892 82194062 -58122703 + AluJb SINE Alu 108 303 -9 442 337 165 21 chr10 82194149 82194440 -58122325 - L3 LINE CR1 -84 1493 1161 1749 125 25 14 chr10 82194490 82194770 -58121995 + Charlie3 DNA MER1_type 1 283 -2427 1144 175 4 17 chr10 82194792 82195026 -58121739 - L1 LINE L1 -2338 3808 3578 189 74 0 0 chr10 82195027 82195054 -58121711 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 229 309 109 0 chr10 82195106 82195281 -58121484 + L1ME LINE L1 5317 5510 -652 305 263 0 0 chr10 82195810 82195890 -58120875 + (CTGGGG)n Simple_repeat Simple_repeat 3 82 0 2173 126 3 0 chr10 82195932 82196226 -58120539 + AluSx SINE Alu 16 310 -2 511 341 44 31 chr10 82196229 82196546 -58120219 - L1M4 LINE L1 -797 5349 5029 345 274 0 0 chr10 82196547 82196653 -58120112 - L1MA10 LINE L1 -1 6333 6228 2120 104 0 17 chr10 82196727 82197037 -58119728 - AluSq SINE Alu 0 306 2 2273 132 0 0 chr10 82198000 82198311 -58118454 + AluSx SINE Alu 1 311 -1 333 299 10 42 chr10 82198828 82199091 -58117674 + CT-rich Low_complexity Low_complexity 1 254 0 315 182 39 19 chr10 82199247 82199401 -58117364 + CT-rich Low_complexity Low_complexity 2 158 0 227 222 56 11 chr10 82199806 82199896 -58116869 - L1ME3 LINE L1 -91 6071 5978 1609 206 0 22 chr10 82201488 82201804 -58114961 + AluJb SINE Alu 1 309 -3 275 287 66 53 chr10 82204457 82204643 -58112122 - MIR SINE MIR -54 208 16 22 0 0 0 chr10 82205885 82205907 -58110858 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr10 82208480 82208515 -58108250 + (CGG)n Simple_repeat Simple_repeat 2 36 0 186 133 0 0 chr10 82209549 82209579 -58107186 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 189 309 73 0 chr10 82209859 82209927 -58106838 - L2 LINE L2 -52 3220 3148 440 198 0 10 chr10 82211339 82211440 -58105325 + L1MB2 LINE L1 6069 6168 -3 1844 173 99 19 chr10 82212663 82213086 -58103679 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 82213236 82213292 -58103473 + AT_rich Low_complexity Low_complexity 1 56 0 1200 141 84 14 chr10 82213832 82214045 -58102720 + MER30 DNA MER1_type 1 228 -2 1808 130 3 33 chr10 82214281 82214588 -58102177 + AluSq SINE Alu 5 302 -11 2063 101 0 0 chr10 82214957 82215234 -58101531 + AluSc SINE Alu 1 277 -32 341 336 49 36 chr10 82216374 82216821 -58099944 + L1M4 LINE L1 2470 2922 -3224 466 277 44 66 chr10 82217356 82217630 -58099135 + MER113 DNA MER1_type? 94 361 -160 197 191 0 24 chr10 82218420 82218462 -58098303 + MIR SINE MIR 140 180 -82 201 174 0 87 chr10 82218897 82218966 -58097799 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 243 255 11 58 chr10 82219019 82219207 -58097558 + (TG)n Simple_repeat Simple_repeat 2 180 0 222 37 0 0 chr10 82219242 82219269 -58097496 + (TG)n Simple_repeat Simple_repeat 1 27 0 2138 129 0 0 chr10 82220455 82220766 -58095999 + AluSq SINE Alu 3 313 0 583 267 88 26 chr10 82221143 82221416 -58095349 + MLT1I LTR MaLR 75 364 -45 576 290 61 30 chr10 82221506 82221737 -58095028 + MIR SINE MIR 21 258 -4 462 283 33 0 chr10 82222032 82222184 -58094581 - MER112 DNA MER1_type -103 157 1 1840 170 3 0 chr10 82222692 82222998 -58093767 + AluSq SINE Alu 5 311 -2 331 269 82 86 chr10 82223002 82223317 -58093448 + L1M3de LINE L1 916 1231 -4934 1672 119 6 103 chr10 82223317 82223636 -58093129 + AluSx SINE Alu 1 288 -24 2166 105 0 6 chr10 82223644 82223924 -58092841 + AluY SINE Alu 1 280 -31 324 0 0 0 chr10 82223924 82223960 -58092805 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2166 105 0 6 chr10 82223960 82223992 -58092773 + AluY SINE Alu 280 311 0 331 269 82 86 chr10 82223992 82224331 -58092434 + L1M3de LINE L1 1238 1552 -4613 394 257 192 5 chr10 82224483 82224697 -58092068 + L1M3de LINE L1 3215 3468 -2661 804 121 0 0 chr10 82224745 82224861 -58091904 + AluJb SINE Alu 1 116 -196 912 276 76 71 chr10 82224879 82225082 -58091683 + L1ME LINE L1 4266 4466 -1680 1899 148 3 3 chr10 82225082 82225392 -58091373 + AluSx SINE Alu 1 310 -2 912 276 76 71 chr10 82225392 82225444 -58091321 + L1ME LINE L1 4466 4516 -1630 1985 126 3 0 chr10 82225444 82225738 -58091027 - L1PA13 LINE L1 -7 6156 5862 912 276 76 71 chr10 82225738 82225836 -58090929 + L1ME LINE L1 4516 4612 -1534 1951 117 0 23 chr10 82225836 82226136 -58090629 - AluSx SINE Alu -6 306 14 912 276 76 71 chr10 82226136 82226568 -58090197 + L1ME LINE L1 4612 5040 -1106 2064 126 0 0 chr10 82226568 82226862 -58089903 - AluSx SINE Alu -18 294 1 912 276 76 71 chr10 82226862 82226931 -58089834 + L1ME LINE L1 5040 5107 -1039 1249 252 90 77 chr10 82226931 82227274 -58089491 - MLT1E1 LTR MaLR 0 654 298 1847 136 0 20 chr10 82227274 82227597 -58089168 + AluSx SINE Alu 1 312 0 1249 252 90 77 chr10 82227597 82227899 -58088866 - MLT1E1 LTR MaLR -356 298 1 912 276 76 71 chr10 82227899 82228036 -58088729 + L1ME LINE L1 5107 5270 -876 1636 183 3 3 chr10 82228036 82228325 -58088440 - AluJo SINE Alu -22 290 2 912 276 76 71 chr10 82228325 82228415 -58088350 + L1ME LINE L1 5270 5358 -788 2130 123 0 13 chr10 82228452 82228768 -58087997 - AluSx SINE Alu 0 312 1 715 231 104 37 chr10 82228928 82229227 -58087538 + LTR48B LTR ERV1 255 573 -71 3835 125 56 50 chr10 82229323 82229467 -58087298 - MER50 LTR ERV1 -23 711 569 1818 117 0 53 chr10 82229467 82229793 -58086972 + AluSx SINE Alu 1 310 0 3835 125 56 50 chr10 82229793 82230345 -58086420 - MER50 LTR ERV1 -165 569 10 380 254 57 131 chr10 82230347 82230510 -58086255 + L1ME LINE L1 5514 5649 -521 1669 162 0 51 chr10 82230510 82230825 -58085940 + AluJb SINE Alu 12 310 -2 380 254 57 131 chr10 82230825 82230944 -58085821 + L1ME LINE L1 5649 5775 -395 272 245 237 36 chr10 82231286 82231425 -58085340 - MIR3 SINE MIR -33 175 9 190 259 0 52 chr10 82231444 82231502 -58085263 + L2 LINE L2 3200 3254 -18 7928 19 1 0 chr10 82231546 82233219 -58083546 + L1PA3 LINE L1 4475 6155 0 2176 108 0 3 chr10 82233534 82233840 -58082925 - AluSx SINE Alu -7 305 1 442 181 50 131 chr10 82234321 82234520 -58082245 - MER117 DNA MER1_type -3 194 12 539 256 143 25 chr10 82234556 82234759 -58082006 - MIR SINE MIR -8 254 28 492 258 137 33 chr10 82234909 82235091 -58081674 - L2 LINE L2 -1 3312 3112 435 326 19 51 chr10 82235077 82235292 -58081473 - L2 LINE L2 -3071 243 36 * 2010 105 29 38 chr10 82235482 82235756 -58081009 + AluSx SINE Alu 2 274 -38 792 83 0 0 chr10 82235756 82235865 -58080900 + (CAATA)n Simple_repeat Simple_repeat 2 110 0 2010 105 29 38 chr10 82235865 82235904 -58080861 + AluSx SINE Alu 274 312 0 2098 124 0 6 chr10 82235904 82236219 -58080546 + AluSq SINE Alu 1 313 0 5201 80 28 0 chr10 82236420 82237092 -58079673 - LTR8 LTR ERV1 0 691 1 736 202 48 21 chr10 82237604 82237792 -58078973 + LTR41 LTR ERVL 1 193 -580 446 233 128 83 chr10 82238050 82238304 -58078461 + LTR41 LTR ERVL 510 795 0 401 327 13 19 chr10 82238601 82238760 -58078005 - MIR SINE MIR -93 169 12 427 345 100 9 chr10 82238776 82238996 -58077769 - MIR SINE MIR -21 241 2 201 74 0 0 chr10 82239217 82239244 -58077521 + (CCCTAA)n Simple_repeat Simple_repeat 2 28 0 309 331 17 40 chr10 82240341 82240516 -58076249 + L1M4 LINE L1 3047 3217 -2929 2305 140 72 37 chr10 82241528 82241956 -58074809 - MSTB2 LTR MaLR 0 457 15 409 162 0 0 chr10 82241957 82242025 -58074740 - MER81 DNA DNA -45 69 2 743 323 97 44 chr10 82242025 82242859 -58073906 - HAL1 LINE L1 -1629 878 1 294 279 54 65 chr10 82242836 82243112 -58073653 - L1MEd LINE L1 -4931 1205 933 * 594 208 40 132 chr10 82243261 82243511 -58073254 + MIR SINE MIR 32 258 -4 224 367 29 7 chr10 82244285 82244424 -58072341 - L2 LINE L2 -213 3059 2918 978 128 0 0 chr10 82244575 82244708 -58072057 + FLAM_C SINE Alu 1 133 0 357 346 20 69 chr10 82244740 82244942 -58071823 - L2 LINE L2 -621 2693 2502 289 246 0 0 chr10 82245041 82245106 -58071659 + MER69 DNA AcHobo 107 171 -1055 * 2083 245 110 11 chr10 82245102 82246014 -58070751 - MER69 DNA AcHobo -429 2097 159 228 229 33 49 chr10 82246016 82246077 -58070688 + MER7A DNA MER2_type 1 60 -288 1772 187 0 0 chr10 82246195 82246495 -58070270 + MER7A DNA MER2_type 49 346 0 635 187 8 24 chr10 82246498 82246621 -58070144 - MER69 DNA AcHobo -2371 155 35 308 268 12 0 chr10 82247694 82247776 -58068989 - MIR SINE MIR -88 174 92 632 215 61 6 chr10 82249129 82249292 -58067473 - MER53 DNA DNA 0 189 18 2114 109 0 16 chr10 82249294 82249607 -58067158 - AluSg SINE Alu -2 308 1 186 348 49 73 chr10 82249745 82249992 -58066773 + L2 LINE L2 2601 2841 -473 335 304 62 83 chr10 82250147 82250247 -58066518 + L1M4 LINE L1 4154 4255 -1891 2027 131 10 0 chr10 82250247 82250553 -58066212 + AluSx SINE Alu 1 309 -3 335 304 62 83 chr10 82250553 82250728 -58066037 + L1M4 LINE L1 4255 4423 -1723 1882 196 22 0 chr10 82250791 82251149 -58065616 + MER47A DNA MER2_type 1 366 0 446 320 47 39 chr10 82251917 82252151 -58064614 + MIR SINE MIR 14 249 -13 284 186 29 29 chr10 82252227 82252297 -58064468 - MIR SINE MIR -108 154 85 240 303 53 0 chr10 82252842 82252918 -58063847 + MIR3 SINE MIR 82 161 -47 239 280 129 0 chr10 82253758 82253851 -58062914 - L2 LINE L2 0 3272 3168 309 275 8 75 chr10 82255731 82255851 -58060914 + MIR3 SINE MIR 15 126 -82 222 282 58 29 chr10 82257448 82257551 -58059214 + MIR3 SINE MIR 9 114 -94 1538 288 95 13 chr10 82257606 82257956 -58058809 - L1MC4 LINE L1 -139 7903 7583 189 0 0 0 chr10 82257956 82257977 -58058788 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1538 288 95 13 chr10 82257977 82258234 -58058531 - L1MC4 LINE L1 -459 7583 7246 196 293 38 57 chr10 82258951 82259057 -58057708 - MIR SINE MIR -78 184 81 219 250 28 14 chr10 82259281 82259353 -58057412 + (TA)n Simple_repeat Simple_repeat 1 73 0 327 104 0 0 chr10 82259626 82259674 -58057091 + (CA)n Simple_repeat Simple_repeat 2 49 0 11381 162 14 21 chr10 82259859 82260792 -58055973 - L1MA5 LINE L1 0 7002 6064 1537 188 7 0 chr10 82260792 82261080 -58055685 - AluJo SINE Alu -22 290 1 11381 162 14 21 chr10 82261080 82262361 -58054404 - L1MA5 LINE L1 -938 6064 4817 2237 79 3 31 chr10 82262361 82262679 -58054086 + AluSx SINE Alu 1 309 -3 11381 162 14 21 chr10 82262679 82263589 -58053176 - L1MA5 LINE L1 -2185 4817 3902 1190 203 36 33 chr10 82263600 82263905 -58052860 + AluJo SINE Alu 7 312 0 4183 204 47 6 chr10 82263910 82265489 -58051276 - L1MA5 LINE L1 -2942 3906 2257 1091 294 42 21 chr10 82265845 82266321 -58050444 - L1ME3A LINE L1 0 6170 5685 38513 76 18 10 chr10 82266391 82272503 -58044262 + L1PA6 LINE L1 11 6170 0 373 252 87 0 chr10 82272507 82272622 -58044143 - L1ME3A LINE L1 -578 5586 5462 477 184 0 0 chr10 82272625 82272712 -58044053 + L1MC1 LINE L1 1358 1444 -4940 6311 204 30 5 chr10 82272913 82275380 -58041385 + L1MC1 LINE L1 4040 6569 0 22 35 0 0 chr10 82275380 82275409 -58041356 + AT_rich Low_complexity Low_complexity 1 29 0 1269 233 77 14 chr10 82275409 82275838 -58040927 + L1M4 LINE L1 4317 4772 -1374 1101 158 47 0 chr10 82275841 82276056 -58040709 + L1MA8 LINE L1 6067 6291 0 744 249 11 0 chr10 82276477 82276662 -58040103 + L1M4 LINE L1 4762 4948 -1198 282 253 0 0 chr10 82276669 82276752 -58040013 + GA-rich Low_complexity Low_complexity 4 86 0 1745 164 29 23 chr10 82276753 82277063 -58039702 + AluSx SINE Alu 1 312 0 746 186 22 28 chr10 82277068 82277382 -58039383 + GA-rich Low_complexity Low_complexity 1 312 0 1482 218 22 8 chr10 82277420 82277783 -58038982 + L1M4 LINE L1 4967 5334 -812 1533 220 17 25 chr10 82277893 82278252 -58038513 - MLT1A1 LTR MaLR 0 365 10 353 287 32 38 chr10 82278997 82279241 -58037524 + MIR SINE MIR 4 243 -19 267 175 0 0 chr10 82281025 82281082 -58035683 + (CA)n Simple_repeat Simple_repeat 2 58 0 503 289 99 47 chr10 82281303 82281667 -58035098 + L2 LINE L2 2931 3313 0 384 322 95 52 chr10 82282407 82282808 -58033957 + L1MEd LINE L1 366 783 -5336 27 29 0 0 chr10 82282875 82282909 -58033856 + AT_rich Low_complexity Low_complexity 1 34 0 225 191 119 48 chr10 82283075 82283159 -58033606 + MLT1J1 LTR MaLR 75 164 -282 2284 105 3 0 chr10 82283442 82283736 -58033029 + AluSx SINE Alu 3 297 -15 277 132 0 0 chr10 82284202 82284240 -58032525 - Alu SINE Alu -263 40 3 390 272 196 5 chr10 82284359 82284543 -58032222 + MIR SINE MIR 15 233 -29 248 257 14 0 chr10 82284565 82284639 -58032126 + L1M4 LINE L1 3787 3861 -2285 805 31 0 0 chr10 82285441 82285537 -58031228 + L1PA4 LINE L1 6058 6153 -2 * 17448 73 0 0 chr10 82285507 82288599 -58028166 + L1PA6 LINE L1 3044 6145 -9 22 35 0 0 chr10 82288720 82288749 -58028016 + AT_rich Low_complexity Low_complexity 1 29 0 2108 170 14 0 chr10 82288860 82289218 -58027547 + MER47A DNA MER2_type 4 366 0 430 335 30 30 chr10 82290014 82290250 -58026515 + MIR SINE MIR 14 249 -13 222 145 145 14 chr10 82290327 82290396 -58026369 - MIR SINE MIR -108 154 77 183 333 53 0 chr10 82290923 82290998 -58025767 + MIR3 SINE MIR 82 160 -48 10669 174 77 65 chr10 82292034 82292649 -58024116 + L1MA5 LINE L1 2420 3026 -3274 2162 122 3 7 chr10 82292649 82292953 -58023812 + AluSp SINE Alu 1 303 -10 10669 174 77 65 chr10 82292953 82293023 -58023742 + L1MA5 LINE L1 3026 3094 -3206 1558 197 17 17 chr10 82293023 82293323 -58023442 - AluJo SINE Alu -12 300 1 10669 174 77 65 chr10 82293323 82293807 -58022958 + L1MA5 LINE L1 3094 3571 -2729 3224 139 14 2 chr10 82293807 82294295 -58022470 - LOR1a LTR ERV1 -1 496 3 10669 174 77 65 chr10 82294295 82295160 -58021605 + L1MA5 LINE L1 3571 4424 -1876 749 157 7 82 chr10 82295160 82295270 -58021495 + FLAM_C SINE Alu 4 102 -210 3800 177 162 36 chr10 82295270 82296221 -58020544 + MER11C LTR ERVK 1 1071 0 749 157 7 82 chr10 82296221 82296257 -58020508 + FLAM_C SINE Alu 102 139 -173 10669 174 77 65 chr10 82296257 82297906 -58018859 + L1MA5 LINE L1 4424 6298 -2 264 240 27 13 chr10 82298437 82298512 -58018253 + (TA)n Simple_repeat Simple_repeat 2 77 0 2215 131 10 34 chr10 82299001 82299016 -58017749 - HUERS-P2 LTR ERV1 -1 3087 3073 4236 171 59 6 chr10 82299016 82299801 -58016964 - LTR1B LTR ERV1 0 826 1 2215 131 10 34 chr10 82299801 82300150 -58016615 - HUERS-P2 LTR ERV1 -15 3073 669 8286 148 50 8 chr10 82300150 82301441 -58015324 - HUERS-P2 LTR ERV1 -494 6597 5253 2200 116 0 0 chr10 82301444 82301737 -58015028 + MER52-int LTR ERV1 4904 5196 -1895 616 122 0 0 chr10 82301745 82301835 -58014930 - HUERS-P2 LTR ERV1 -1818 5273 5184 * 15888 176 15 17 chr10 82301828 82304566 -58012199 - HUERS-P2 LTR ERV1 -2875 4216 1544 306 278 41 10 chr10 82304782 82304879 -58011886 - MER97c DNA MER1_type? -855 235 136 1633 289 66 17 chr10 82305027 82305666 -58011099 + L1MC4 LINE L1 7239 7908 -134 224 301 36 10 chr10 82305713 82305841 -58010924 - MIR SINE MIR -71 137 9 281 258 8 75 chr10 82307451 82307571 -58009194 - MIR3 SINE MIR -82 126 15 198 320 53 0 chr10 82310397 82310472 -58006293 - MIR3 SINE MIR -47 161 83 419 330 47 34 chr10 82311150 82311383 -58005382 - MIR SINE MIR -13 249 14 1830 194 19 6 chr10 82312130 82312490 -58004275 - MER47A DNA MER2_type 0 366 2 14158 203 31 8 chr10 82312532 82315456 -58001309 - L1PA12 LINE L1 -2232 5352 968 185 81 0 27 chr10 82315456 82315493 -58001272 + (TTG)n Simple_repeat Simple_repeat 2 37 0 14158 203 31 8 chr10 82315493 82316475 -58000290 - L1PA12 LINE L1 -6616 968 11 1388 69 21 0 chr10 82316726 82316750 -58000015 + L1P LINE L1 2122 2144 -4002 7651 21 0 0 chr10 82316750 82317826 -57998939 - L1PA4 LINE L1 -3 6152 5075 1388 69 21 0 chr10 82317826 82317990 -57998775 + L1P LINE L1 2144 2314 -3832 5385 165 50 7 chr10 82318080 82319407 -57997358 + L1P4 LINE L1 4215 5591 -572 6103 57 3 0 chr10 82319407 82320179 -57996586 + L1PA7 LINE L1 5367 6141 -13 2296 287 80 18 chr10 82320239 82320790 -57995975 - L1M4 LINE L1 -2409 3737 3222 2100 159 0 0 chr10 82320790 82321135 -57995630 - L1PA16 LINE L1 -18 6148 5804 2296 287 80 18 chr10 82321135 82321830 -57994935 - L1M4 LINE L1 -2924 3222 2413 1137 96 0 0 chr10 82321888 82322044 -57994721 + L1P4 LINE L1 5607 5762 -399 263 211 84 0 chr10 82322149 82322220 -57994545 - L1M4 LINE L1 -2283 3863 3787 505 319 76 5 chr10 82322259 82322444 -57994321 - MIR SINE MIR -63 199 2 26 50 0 0 chr10 82322695 82322735 -57994030 + AT_rich Low_complexity Low_complexity 1 40 0 26 50 0 0 chr10 82323420 82323460 -57993305 + AT_rich Low_complexity Low_complexity 1 40 0 213 41 82 41 chr10 82323505 82323554 -57993211 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 351 244 78 17 chr10 82324725 82324840 -57991925 - L2 LINE L2 0 3313 3192 342 143 0 0 chr10 82325155 82325218 -57991547 + (TG)n Simple_repeat Simple_repeat 2 64 0 2275 86 3 29 chr10 82328055 82328368 -57988397 + AluY SINE Alu 2 306 -5 2181 158 54 31 chr10 82328873 82329297 -57987468 - Tigger2a DNA MER2_type 0 434 1 276 77 0 0 chr10 82329427 82329466 -57987299 + (TG)n Simple_repeat Simple_repeat 1 39 0 217 146 24 0 chr10 82329622 82329663 -57987102 + (CA)n Simple_repeat Simple_repeat 1 42 0 29 28 0 0 chr10 82329779 82329815 -57986950 + AT_rich Low_complexity Low_complexity 1 36 0 579 271 0 7 chr10 82329936 82330076 -57986689 - MLT1F LTR MaLR -399 143 5 392 287 84 73 chr10 82330124 82330410 -57986355 - MLT1F-int LTR MaLR -60 1311 1023 25 51 0 0 chr10 82331074 82331113 -57985652 + AT_rich Low_complexity Low_complexity 1 39 0 270 329 151 9 chr10 82331179 82331404 -57985361 - L2 LINE L2 -10 3303 3047 1024 155 18 0 chr10 82331500 82331668 -57985097 + ERVL-B1 LTR ERVL 5587 5757 -7 1457 257 115 13 chr10 82331668 82332138 -57984627 + MLT2B1 LTR ERVL 1 518 -2 1665 241 28 47 chr10 82332218 82332691 -57984074 - MLT2B1 LTR ERVL -56 464 1 1569 158 17 14 chr10 82332691 82332982 -57983783 - ERVL-B1 LTR ERVL -7 5757 5466 * 3481 188 36 6 chr10 82332961 82333619 -57983146 - ERVL-B1 LTR ERVL -886 4878 4201 5662 218 138 18 chr10 82333634 82334994 -57981771 - MER52A LTR ERV1 -232 1523 1 9505 102 14 2 chr10 82334994 82336318 -57980447 + MER57A-int LTR ERV1 5810 7148 -389 556 152 105 0 chr10 82336318 82336423 -57980342 + LTR54B LTR ERV1 3 118 -380 1230 113 204 9 chr10 82336446 82336667 -57980098 + MER57A-int LTR ERV1 7274 7537 0 1765 170 86 5 chr10 82336667 82337038 -57979727 + MER57A LTR ERV1 1 401 -2 935 185 120 0 chr10 82338321 82338521 -57978244 - MER57A LTR ERV1 -27 376 153 771 65 79 15 chr10 82338526 82339650 -57977115 + (TA)n Simple_repeat Simple_repeat 1 1195 0 27 29 0 0 chr10 82339809 82339843 -57976922 + AT_rich Low_complexity Low_complexity 1 34 0 524 321 30 34 chr10 82340052 82340289 -57976476 - MIR SINE MIR -14 248 13 601 318 50 0 chr10 82340489 82340668 -57976097 + MER5A DNA MER1_type 2 189 0 3039 209 26 54 chr10 82340774 82341404 -57975361 - L1MB4 LINE L1 -51 6129 5483 180 0 0 0 chr10 82341404 82341424 -57975341 + (TC)n Simple_repeat Simple_repeat 2 21 0 3039 209 26 54 chr10 82341424 82341492 -57975273 - L1MB4 LINE L1 -697 5483 5415 1793 139 0 65 chr10 82341492 82341802 -57974963 + AluSx SINE Alu 1 290 -22 3039 209 26 54 chr10 82341802 82342342 -57974423 - L1MB4 LINE L1 -765 5415 4776 1286 82 18 32 chr10 82342340 82342691 -57974074 + L1PB1 LINE L1 5159 6150 -1 * 7516 245 79 38 chr10 82342691 82344452 -57972313 - L1M4 LINE L1 -833 5549 3861 2385 61 0 0 chr10 82344452 82344749 -57972016 + AluY SINE Alu 8 304 -7 7516 245 79 38 chr10 82344749 82346947 -57969818 - L1M4 LINE L1 -2521 3861 1434 1387 106 48 5 chr10 82346975 82347183 -57969582 + AluSp SINE Alu 97 313 0 215 238 0 0 chr10 82347391 82347433 -57969332 + A-rich Low_complexity Low_complexity 3 44 0 307 314 29 19 chr10 82347647 82347752 -57969013 + L1MDa LINE L1 886 991 -5549 * 4233 222 15 18 chr10 82347736 82348746 -57968019 + L1MD1 LINE L1 5236 6242 0 2329 248 61 56 chr10 82348726 82348971 -57967794 + L1MB1 LINE L1 3012 3254 -2892 * 2199 123 10 0 chr10 82348971 82349281 -57967484 + AluSq SINE Alu 1 313 0 2329 248 61 56 chr10 82349281 82350167 -57966598 + L1MB1 LINE L1 3254 4149 -1997 579 234 152 17 chr10 82350168 82350200 -57966565 + L1MB1 LINE L1 4335 4361 -1785 1204 207 3 53 chr10 82350200 82350504 -57966261 + AluJo SINE Alu 1 289 -23 579 234 152 17 chr10 82350504 82350707 -57966058 + L1MB1 LINE L1 4361 4600 -1546 24 53 0 0 chr10 82350759 82350797 -57965968 + AT_rich Low_complexity Low_complexity 1 38 0 267 254 16 0 chr10 82352522 82352585 -57964180 + MER5B DNA MER1_type 1 64 -114 844 207 0 0 chr10 82352586 82352731 -57964034 + FRAM SINE Alu 2 146 -30 243 237 96 156 chr10 82352740 82352875 -57963890 + MER5B DNA MER1_type 50 176 -2 380 274 61 30 chr10 82353022 82353186 -57963579 + L1MB1 LINE L1 4966 5134 -1012 4528 170 41 5 chr10 82353243 82354114 -57962651 + L1MB1 LINE L1 5266 6168 0 558 287 22 3 chr10 82354111 82354405 -57962360 + L1ME3 LINE L1 5191 5493 -669 * 732 143 0 17 chr10 82354406 82354525 -57962240 + FRAM SINE Alu 41 157 -19 1109 283 45 12 chr10 82354531 82354955 -57961810 + L1ME3 LINE L1 5482 5919 -245 340 345 35 0 chr10 82354976 82355121 -57961644 + L1ME3 LINE L1 5996 6145 -17 26 30 0 0 chr10 82355160 82355193 -57961572 + AT_rich Low_complexity Low_complexity 1 33 0 247 354 83 0 chr10 82355347 82355443 -57961322 - MIR SINE MIR -112 150 47 38 0 0 0 chr10 82355502 82355540 -57961225 + AT_rich Low_complexity Low_complexity 1 38 0 197 328 106 32 chr10 82355580 82355769 -57960996 + MIR SINE MIR 43 245 -17 * 809 331 150 19 chr10 82355763 82356389 -57960376 + L2 LINE L2 312 1019 -2295 999 286 105 67 chr10 82356393 82356760 -57960005 + L2 LINE L2 2522 2873 -440 1607 219 11 37 chr10 82356760 82357135 -57959630 - MLT1A1 LTR MaLR 0 365 1 999 286 105 67 chr10 82357135 82357220 -57959545 + L2 LINE L2 2873 2953 -360 2313 132 5 16 chr10 82357220 82357599 -57959166 - THE1C LTR MaLR 0 375 1 999 286 105 67 chr10 82357599 82357903 -57958862 + L2 LINE L2 2953 3313 0 241 282 60 26 chr10 82359050 82359166 -57957599 + L1M4c LINE L1 22 396 -6250 1949 199 53 36 chr10 82359255 82359807 -57956958 + L1MB4 LINE L1 5710 6178 -2 36 0 0 0 chr10 82359814 82359850 -57956915 + AT_rich Low_complexity Low_complexity 1 36 0 242 180 16 0 chr10 82359864 82359925 -57956840 + (TG)n Simple_repeat Simple_repeat 2 63 0 367 169 0 14 chr10 82360019 82360090 -57956675 + L1MC1 LINE L1 6254 6323 -10 2255 59 0 36 chr10 82360118 82360424 -57956341 - AluY SINE Alu -16 295 1 250 313 28 49 chr10 82360485 82360629 -57956136 - MLT1L LTR MaLR -24 591 451 1436 213 56 69 chr10 82361315 82361690 -57955075 - MLT1A2 LTR MaLR -4 370 1 932 252 126 64 chr10 82361922 82362359 -57954406 - MLT1C LTR MaLR -3 464 1 27 49 0 0 chr10 82362665 82362706 -57954059 + AT_rich Low_complexity Low_complexity 1 41 0 24 67 0 0 chr10 82364525 82364570 -57952195 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr10 82364776 82364801 -57951964 + AT_rich Low_complexity Low_complexity 1 25 0 661 271 17 17 chr10 82364868 82365049 -57951716 + MIR SINE MIR 58 238 -24 27 49 0 0 chr10 82365051 82365092 -57951673 + AT_rich Low_complexity Low_complexity 1 41 0 232 333 71 80 chr10 82366210 82366660 -57950105 - L2 LINE L2 0 3272 2827 195 42 0 0 chr10 82366668 82366692 -57950073 + (T)n Simple_repeat Simple_repeat 1 24 0 1053 224 67 58 chr10 82366791 82367104 -57949661 + L1MCa LINE L1 10 325 -6101 939 282 21 6 chr10 82367108 82367448 -57949317 + L1MCa LINE L1 2566 2910 -3516 366 256 26 51 chr10 82367508 82367625 -57949140 + MER5B DNA MER1_type 59 172 -6 28 48 0 0 chr10 82367761 82367803 -57948962 + AT_rich Low_complexity Low_complexity 1 42 0 449 58 16 277 chr10 82367824 82368012 -57948753 + L1MA8 LINE L1 6010 6148 -143 26 0 0 0 chr10 82368775 82368801 -57947964 + AT_rich Low_complexity Low_complexity 1 26 0 2441 46 0 3 chr10 82369049 82369352 -57947413 - AluY SINE Alu -9 302 1 21 36 0 0 chr10 82370785 82370813 -57945952 + AT_rich Low_complexity Low_complexity 1 28 0 667 270 58 32 chr10 82371312 82371657 -57945108 - L1ME1 LINE L1 -2 6164 5811 * 3877 200 63 38 chr10 82371656 82372960 -57943805 - L1MC2 LINE L1 -11 6333 4901 360 0 0 0 chr10 82372968 82373008 -57943757 + (TG)n Simple_repeat Simple_repeat 1 40 0 1475 246 77 48 chr10 82373022 82373809 -57942956 - L1ME1 LINE L1 -378 5788 4982 239 338 93 34 chr10 82373915 82374119 -57942646 + MLT1J LTR MaLR 24 239 -272 1719 71 9 0 chr10 82374310 82374536 -57942229 - L1PA6 LINE L1 -7 6147 5920 22 0 0 0 chr10 82375076 82375098 -57941667 + AT_rich Low_complexity Low_complexity 1 22 0 270 188 0 0 chr10 82375517 82375581 -57941184 + L1MA2 LINE L1 6241 6304 0 821 139 0 0 chr10 82376425 82376562 -57940203 - AluSg/x SINE Alu -8 302 166 2635 114 0 10 chr10 82376653 82377040 -57939725 - L1PA13 LINE L1 -4 6159 5777 325 294 59 29 chr10 82377135 82377271 -57939494 + L1MC3 LINE L1 6503 6642 -1143 * 382 240 0 62 chr10 82377239 82377335 -57939430 - L1MC4 LINE L1 -1339 6703 6614 344 348 9 0 chr10 82377335 82377447 -57939318 - L1MC4 LINE L1 -1341 6701 6589 * 360 294 63 0 chr10 82377423 82377580 -57939185 + L1MC4 LINE L1 6586 6705 -1337 350 246 53 35 chr10 82377521 82377635 -57939130 - L1MC4 LINE L1 -1323 6719 6604 * 1208 268 73 54 chr10 82377676 82378105 -57938660 + L1M4 LINE L1 2303 2722 -3424 631 64 11 11 chr10 82378105 82378199 -57938566 + (TAGA)n Simple_repeat Simple_repeat 1 94 0 1208 268 73 54 chr10 82378199 82378952 -57937813 + L1M4 LINE L1 2722 3508 -2638 519 258 94 81 chr10 82379029 82379867 -57936898 + L1M4 LINE L1 4422 5270 -876 1248 183 84 22 chr10 82379909 82380183 -57936582 + AluJb SINE Alu 1 291 -11 1875 101 14 28 chr10 82383105 82383427 -57933338 + AluSq SINE Alu 1 318 0 481 311 197 3 chr10 82387056 82387345 -57929420 + MLT1I LTR MaLR 65 409 0 578 328 80 13 chr10 82387990 82388304 -57928461 + LTR16A LTR ERVL 21 355 -95 2365 90 0 0 chr10 82388402 82388713 -57928052 - AluY SINE Alu 0 311 1 197 305 12 37 chr10 82388843 82388925 -57927840 - L2 LINE L2 -1004 2310 2231 284 315 56 0 chr10 82389058 82389166 -57927599 - MLT1H LTR MaLR -26 523 410 852 254 44 44 chr10 82389455 82389703 -57927062 - MIR SINE MIR -5 257 10 2233 99 3 3 chr10 82391326 82391638 -57925127 + AluSx SINE Alu 1 312 0 746 219 49 34 chr10 82393372 82393577 -57923188 + MER63A DNA MER1_type 1 208 -2 1296 209 34 4 chr10 82393904 82394172 -57922593 + LTR43 LTR ERV1 195 470 -132 1302 223 96 47 chr10 82394447 82394873 -57921892 + MER101 LTR ERV1 9 455 -19 2177 90 0 0 chr10 82396674 82396953 -57919812 - AluSx SINE Alu -33 279 1 658 244 57 122 chr10 82397199 82397658 -57919107 + MER63C DNA MER1_type 83 511 -419 251 302 103 0 chr10 82404472 82404598 -57912167 + MIR SINE MIR 93 231 -31 855 249 90 34 chr10 82405316 82405670 -57911095 - MLT1A2 LTR MaLR 0 374 1 259 170 22 39 chr10 82408109 82408291 -57908474 + (TG)n Simple_repeat Simple_repeat 2 180 0 283 319 0 0 chr10 82409814 82409908 -57906857 + G-rich Low_complexity Low_complexity 1 94 0 1464 196 38 46 chr10 82411896 82412268 -57904497 + MLT1A2 LTR MaLR 6 374 0 2539 32 0 10 chr10 82412679 82412987 -57903778 - AluY SINE Alu -6 305 1 822 177 0 49 chr10 82413476 82413640 -57903125 - AluSc SINE Alu -26 283 128 321 348 12 37 chr10 82414240 82414404 -57902361 - MIR SINE MIR -54 208 49 806 249 92 29 chr10 82414534 82414807 -57901958 + MLT1L LTR MaLR 2 291 -324 447 306 56 60 chr10 82414807 82415059 -57901706 - L2 LINE L2 -2345 969 719 665 276 100 17 chr10 82415355 82415594 -57901171 + MLT1L LTR MaLR 324 582 -33 184 387 19 0 chr10 82618348 82618454 -57698311 - MIR SINE MIR -67 141 34 24 0 0 0 chr10 82618669 82618693 -57698072 + AT_rich Low_complexity Low_complexity 1 24 0 1129 99 6 12 chr10 82621112 82621284 -57695481 - L1M1 LINE L1 -4716 2849 2679 582 208 138 0 chr10 82621408 82621567 -57695198 + MER53 DNA DNA 7 187 -2 324 373 10 23 chr10 82621602 82621856 -57694909 - LTR16A LTR ERVL -202 248 1 2217 88 57 0 chr10 82622334 82622630 -57694135 + AluSp SINE Alu 1 313 0 188 271 34 0 chr10 82622891 82622950 -57693815 + MIR SINE MIR 202 262 0 1914 150 37 6 chr10 82623299 82623626 -57693139 + MER1B DNA MER1_type 1 337 0 2294 158 35 24 chr10 82624306 82624729 -57692036 - MSTC LTR MaLR 0 428 1 708 237 132 5 chr10 82625925 82626115 -57690650 + MER20 DNA MER1_type 6 219 0 702 269 72 18 chr10 82626178 82626401 -57690364 - MIR SINE MIR 0 262 28 360 0 0 0 chr10 82626546 82626586 -57690179 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 25 0 0 0 chr10 82626673 82626698 -57690067 + AT_rich Low_complexity Low_complexity 1 25 0 42 77 0 0 chr10 82626803 82626894 -57689871 + AT_rich Low_complexity Low_complexity 1 91 0 25 20 0 59 chr10 82627464 82627515 -57689250 + AT_rich Low_complexity Low_complexity 1 48 0 641 348 100 18 chr10 82627540 82628029 -57688736 + L2 LINE L2 2503 3039 -274 252 143 0 0 chr10 82629083 82629125 -57687640 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 22 0 0 0 chr10 82629620 82629642 -57687123 + AT_rich Low_complexity Low_complexity 1 22 0 39 60 0 0 chr10 82629961 82630028 -57686737 + AT_rich Low_complexity Low_complexity 1 67 0 296 285 45 19 chr10 82630224 82630328 -57686437 + FRAM/FAM SINE Alu 1 83 -83 2929 106 11 7 chr10 82630412 82630847 -57685918 - L1PA13 LINE L1 -6 6157 5721 220 256 77 0 chr10 82630862 82630940 -57685825 - L2 LINE L2 -342 2971 2888 338 254 130 86 chr10 82631336 82631651 -57685114 - L1M4 LINE L1 -2693 3453 3125 378 274 57 45 chr10 82631675 82631920 -57684845 - L1M4 LINE L1 -3139 3007 2760 229 62 12 86 chr10 82632925 82633006 -57683759 + (TA)n Simple_repeat Simple_repeat 1 75 0 2105 121 3 7 chr10 82633467 82633764 -57683001 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr10 82633792 82633825 -57682940 + AT_rich Low_complexity Low_complexity 1 33 0 186 313 38 0 chr10 82634649 82634729 -57682036 - MIR SINE MIR -127 135 53 371 343 54 12 chr10 82634903 82635069 -57681696 + MIR SINE MIR 53 225 -37 2049 113 3 3 chr10 82635873 82636164 -57680601 - AluSx SINE Alu -21 291 1 223 330 10 0 chr10 82637063 82637163 -57679602 + G-rich Low_complexity Low_complexity 2 102 0 229 62 12 86 chr10 82637672 82637753 -57679012 + (TA)n Simple_repeat Simple_repeat 2 76 0 331 275 83 71 chr10 82638760 82639314 -57677451 + L1 LINE L1 2760 3402 -2744 247 256 77 0 chr10 82639446 82639524 -57677241 + L2 LINE L2 2889 2972 -342 2903 110 11 7 chr10 82639539 82639974 -57676791 + L1PA13 LINE L1 5721 6157 -6 296 263 45 23 chr10 82640074 82640162 -57676603 - FRAM/FAM SINE Alu -83 83 1 397 226 32 0 chr10 82640357 82640450 -57676315 + MLT1K LTR MaLR 482 577 -11 300 53 0 0 chr10 82640664 82640702 -57676063 + (CA)n Simple_repeat Simple_repeat 2 39 0 2385 63 0 13 chr10 82640895 82641194 -57675571 - AluY SINE Alu -16 295 1 385 114 14 14 chr10 82644940 82645010 -57671755 + L1MA8 LINE L1 6011 6080 -211 240 123 35 111 chr10 82645031 82645128 -57671637 + L1MA8 LINE L1 6054 6148 -143 26 0 0 0 chr10 82645890 82645916 -57670849 + AT_rich Low_complexity Low_complexity 1 26 0 2545 43 0 3 chr10 82646166 82646467 -57670298 - AluY SINE Alu -11 300 1 2186 105 0 10 chr10 82647016 82647356 -57669409 + AluSq SINE Alu 1 313 0 21 36 0 0 chr10 82648871 82648899 -57667866 + AT_rich Low_complexity Low_complexity 1 28 0 682 278 55 29 chr10 82649428 82649773 -57666992 - L1ME1 LINE L1 -2 6164 5811 3973 201 56 40 chr10 82649774 82651092 -57665673 - L1MC2 LINE L1 -9 6335 4898 378 0 0 0 chr10 82651096 82651138 -57665627 + (TG)n Simple_repeat Simple_repeat 1 42 0 1455 292 20 4 chr10 82651142 82651598 -57665167 - L1ME1 LINE L1 -368 5798 5336 661 221 105 64 chr10 82651597 82652051 -57664714 - L1ME LINE L1 -711 5455 4983 * 251 338 93 34 chr10 82652157 82652361 -57664404 + MLT1J LTR MaLR 24 239 -272 1717 70 4 0 chr10 82652552 82652779 -57663986 - L1PA6 LINE L1 -7 6147 5920 22 0 0 0 chr10 82653323 82653345 -57663420 + AT_rich Low_complexity Low_complexity 1 22 0 279 188 0 0 chr10 82653779 82653843 -57662922 + L1MA2 LINE L1 6241 6304 0 755 157 15 0 chr10 82654687 82654821 -57661944 - AluSg/x SINE Alu -9 303 168 2550 114 0 10 chr10 82654914 82655299 -57661466 - L1PA13 LINE L1 -6 6157 5777 225 224 0 82 chr10 82655498 82655596 -57661169 - L1MC4 LINE L1 -1339 6703 6614 228 213 0 0 chr10 82655599 82655660 -57661105 + (TA)n Simple_repeat Simple_repeat 1 61 0 210 222 0 125 chr10 82656100 82656131 -57660634 - L2 LINE L2 -5 3308 3289 1684 146 20 53 chr10 82656131 82656265 -57660500 + AluJo SINE Alu 7 144 -168 1699 58 5 5 chr10 82656265 82656473 -57660292 + AluY SINE Alu 93 300 -11 1684 146 20 53 chr10 82656473 82656639 -57660126 + AluJo SINE Alu 144 297 -15 210 222 0 125 chr10 82656639 82656679 -57660086 - L2 LINE L2 -24 3289 3246 1037 292 48 35 chr10 82656696 82657152 -57659613 - L2 LINE L2 -33 3280 2819 2500 160 24 5 chr10 82657159 82657583 -57659182 - MSTB1 LTR MaLR 0 432 1 1483 185 3 64 chr10 82657659 82657988 -57658777 + AluJo SINE Alu 1 309 -3 740 200 85 24 chr10 82660127 82660292 -57656473 + Charlie4a DNA MER1_type 1 175 -333 729 266 59 19 chr10 82660316 82660674 -57656091 + LTR16A LTR ERVL 25 450 0 * 1066 202 121 0 chr10 82660674 82660963 -57655802 + Charlie4a DNA MER1_type 169 493 -15 300 50 0 0 chr10 82661197 82661219 -57655546 + (TA)n Simple_repeat Simple_repeat 2 26 -15 1868 151 31 3 chr10 82661219 82661510 -57655255 + AluSx SINE Alu 2 300 -12 300 50 0 0 chr10 82661510 82661527 -57655238 + (TA)n Simple_repeat Simple_repeat 25 41 0 531 113 0 0 chr10 82661528 82661608 -57655157 + (CA)n Simple_repeat Simple_repeat 1 80 0 511 308 121 18 chr10 82661636 82661860 -57654905 - MIR SINE MIR 0 262 16 351 249 0 122 chr10 82661886 82662083 -57654682 - L1MC5 LINE L1 -49 7912 7740 215 361 100 33 chr10 82662116 82662296 -57654469 + L2 LINE L2 2676 2867 -447 361 316 140 0 chr10 82662553 82662667 -57654098 + L2 LINE L2 3123 3252 -20 285 29 0 0 chr10 82662674 82662708 -57654057 + (TG)n Simple_repeat Simple_repeat 2 35 0 271 203 16 16 chr10 82663571 82663635 -57653130 + MER116 DNA Mariner 11 74 -6 545 249 93 66 chr10 82663658 82663991 -57652774 - L1ME4a LINE L1 -178 5943 5602 2031 146 7 7 chr10 82663996 82664305 -57652460 - AluSx SINE Alu -3 309 1 313 302 43 17 chr10 82664364 82664480 -57652285 + L2 LINE L2 3195 3313 0 729 306 54 12 chr10 82664671 82664913 -57651852 + MIR SINE MIR 11 262 0 950 250 119 44 chr10 82665570 82666076 -57650689 - L2 LINE L2 -2 3311 2786 4217 90 11 8 chr10 82666660 82667280 -57649485 + L1MA3 LINE L1 5684 6305 0 2429 76 0 16 chr10 82667563 82667879 -57648886 - AluY SINE Alu 0 311 1 24 32 0 0 chr10 82667887 82667918 -57648847 + AT_rich Low_complexity Low_complexity 1 31 0 990 326 77 40 chr10 82668299 82668596 -57648169 + L2 LINE L2 2341 2625 -688 2006 158 0 0 chr10 82668596 82668899 -57647866 - AluJo SINE Alu -9 303 1 990 326 77 40 chr10 82668899 82669357 -57647408 + L2 LINE L2 2625 3122 -191 305 155 0 0 chr10 82669445 82669503 -57647262 - L1ME4a LINE L1 -1 6120 6063 542 273 8 0 chr10 82669532 82669653 -57647112 + L2 LINE L2 3191 3312 -1 311 153 0 0 chr10 82670270 82670329 -57646436 - L1ME4a LINE L1 0 6121 6063 22 35 0 0 chr10 82670621 82670650 -57646115 + AT_rich Low_complexity Low_complexity 1 29 0 426 281 15 30 chr10 82670768 82670967 -57645798 - L1ME LINE L1 -403 5718 5523 216 292 90 48 chr10 82672586 82672787 -57643978 - MIR SINE MIR -15 247 34 454 235 25 13 chr10 82673715 82673824 -57642941 - MER5A DNA MER1_type -60 118 18 315 338 19 5 chr10 82673914 82674130 -57642635 - L1ME4a LINE L1 -239 5882 5664 207 139 0 0 chr10 82674168 82674204 -57642561 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 234 279 101 13 chr10 82674671 82674750 -57642015 - MER91B DNA MER1_type -1 189 104 454 206 63 40 chr10 82674773 82674899 -57641866 - MER91B DNA MER1_type -60 130 2 438 219 166 64 chr10 82675059 82675223 -57641542 - MER5A DNA MER1_type -1 188 6 395 131 143 0 chr10 82675317 82675401 -57641364 - MER5B DNA MER1_type -82 96 1 1225 75 0 70 chr10 82675575 82675774 -57640991 + MER30B DNA MER1_type 6 190 0 1485 194 136 70 chr10 82676375 82676855 -57639910 + MLT1F1 LTR MaLR 4 522 -45 2571 54 0 0 chr10 82676855 82677152 -57639613 + AluY SINE Alu 1 297 -14 1485 194 136 70 chr10 82677152 82677187 -57639578 + MLT1F1 LTR MaLR 522 553 -14 300 53 0 0 chr10 82677345 82677383 -57639382 + (TG)n Simple_repeat Simple_repeat 2 39 0 371 205 36 0 chr10 82677603 82677686 -57639079 - MLT1K LTR MaLR -21 567 482 229 207 17 0 chr10 82678466 82678524 -57638241 + MLT1K LTR MaLR 522 580 -8 201 244 0 0 chr10 82678688 82678729 -57638036 - MIR3 SINE MIR -7 201 161 283 192 25 16 chr10 82678753 82678875 -57637890 - L1ME LINE L1 -769 5395 5268 22 0 0 0 chr10 82679114 82679136 -57637629 + AT_rich Low_complexity Low_complexity 1 22 0 286 295 0 0 chr10 82679160 82679255 -57637510 - L1ME LINE L1 -1175 4971 4877 1397 148 115 112 chr10 82679794 82680212 -57636553 + MLT1C LTR MaLR 45 463 -4 773 272 51 20 chr10 82680407 82680602 -57636163 + MIR SINE MIR 50 250 -12 1131 219 49 50 chr10 82680804 82681185 -57635580 + MLT1B LTR MaLR 6 392 -4 919 271 124 65 chr10 82681250 82681367 -57635398 + L2 LINE L2 2078 2187 -1127 1246 204 88 62 chr10 82681367 82681719 -57635046 + MLT1A1 LTR MaLR 5 365 0 919 271 124 65 chr10 82681719 82682199 -57634566 + L2 LINE L2 2187 2710 -604 483 204 23 53 chr10 82682369 82682501 -57634264 - L1ME1 LINE L1 -5 6161 6034 421 220 130 0 chr10 82682535 82682635 -57634130 - FLAM_A SINE Alu -17 116 4 433 305 188 17 chr10 82682651 82683131 -57633634 + L2 LINE L2 2698 3269 -44 440 149 0 0 chr10 82683158 82683232 -57633533 + MER116 DNA Mariner 1 74 -6 444 303 54 21 chr10 82683712 82683953 -57632812 + MIR SINE MIR 2 250 -12 193 340 126 0 chr10 82684836 82684939 -57631826 - MIR SINE MIR -1 261 146 3656 118 0 0 chr10 82685761 82686312 -57630453 + L1PA15 LINE L1 5523 6073 -92 208 329 233 0 chr10 82687898 82687971 -57628794 + L2 LINE L2 3133 3222 -50 978 168 25 0 chr10 82688676 82688837 -57627928 - FRAM SINE Alu -1 165 1 1008 168 0 12 chr10 82689283 82689450 -57627315 - FRAM SINE Alu -1 165 1 229 122 0 0 chr10 82689982 82690023 -57626742 - L1ME4a LINE L1 -17 6104 6064 27 92 0 0 chr10 82690318 82690394 -57626371 + AT_rich Low_complexity Low_complexity 1 76 0 1580 174 48 36 chr10 82690612 82690968 -57625797 - THE1B LTR MaLR -4 360 1 773 114 15 0 chr10 82691395 82691526 -57625239 + (TTCC)n Simple_repeat Simple_repeat 1 133 0 2006 129 3 24 chr10 82691526 82691821 -57624944 - AluJb SINE Alu -23 289 1 1350 228 102 68 chr10 82692129 82692805 -57623960 - HAL1 LINE L1 -100 2407 1709 1177 285 113 22 chr10 82692828 82693471 -57623294 - HAL1 LINE L1 -1783 724 23 25 31 0 0 chr10 82693522 82693554 -57623211 + AT_rich Low_complexity Low_complexity 1 32 0 908 207 40 34 chr10 82693818 82694219 -57622546 + LTR16A1 LTR ERVL 7 457 0 190 286 245 0 chr10 82695203 82695301 -57621464 + MIR SINE MIR 24 145 -117 3262 87 11 0 chr10 82695335 82695783 -57620982 - L1PA14 LINE L1 -14 7585 7133 18291 166 8 18 chr10 82695913 82697425 -57619340 - L1PA14 LINE L1 -459 7140 5615 2189 113 3 7 chr10 82697425 82697725 -57619040 + AluSp SINE Alu 1 299 -14 18291 166 8 18 chr10 82697725 82701674 -57615091 - L1PA14 LINE L1 -1984 5615 1714 918 312 47 33 chr10 82701698 82702121 -57614644 - L2 LINE L2 -9 3304 2876 2391 96 0 0 chr10 82702162 82702455 -57614310 + AluSg SINE Alu 1 293 -17 5579 99 6 6 chr10 82702455 82703273 -57613492 - L1MA2 LINE L1 -2 6302 5485 688 181 94 35 chr10 82703438 82703609 -57613156 - MIR SINE MIR -12 250 70 203 0 37 0 chr10 82703655 82703682 -57613083 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2232 115 49 14 chr10 82704005 82704354 -57612411 - THE1B LTR MaLR -2 362 2 3862 201 21 50 chr10 82704357 82705355 -57611410 - LTR5 LTR ERVK 0 969 1 10437 109 20 28 chr10 82705359 82706952 -57609813 - THE1B-int LTR MaLR 0 1580 1 2120 115 46 17 chr10 82706952 82707301 -57609464 - THE1B LTR MaLR 0 364 6 5079 104 26 0 chr10 82707395 82708125 -57608640 + L1PA16 LINE L1 5409 6157 -9 1560 198 60 13 chr10 82709489 82709787 -57606978 + AluJb SINE Alu 1 312 0 1938 168 7 0 chr10 82710020 82710330 -57606435 - AluJo SINE Alu 0 312 1 482 269 15 23 chr10 82710333 82710463 -57606302 - L2 LINE L2 0 3313 3185 2301 95 0 25 chr10 82710732 82711047 -57605718 - AluSx SINE Alu -5 307 1 1517 223 0 26 chr10 82711128 82711437 -57605328 + AluJo SINE Alu 1 301 -11 543 198 110 138 chr10 82711445 82711903 -57604862 + MER110A LTR ERV1 70 491 0 306 248 0 78 chr10 82712057 82712186 -57604579 + L1MC4a LINE L1 5254 5372 -2436 1613 243 37 14 chr10 82712222 82712655 -57604110 - LTR47B LTR ERVL 0 443 1 5080 80 7 6 chr10 82712710 82713400 -57603365 + L1PA10 LINE L1 5478 6168 0 3390 229 48 45 chr10 82713431 82714617 -57602148 + L1MC4a LINE L1 5402 6590 -1218 1318 171 27 4 chr10 82714625 82714883 -57601882 + L1MC4a LINE L1 6651 6914 -894 1944 148 46 11 chr10 82714937 82715288 -57601477 - Tigger3(Golem) DNA MER2_type -2666 363 1 27 49 0 0 chr10 82715411 82715452 -57601313 + AT_rich Low_complexity Low_complexity 1 41 0 262 264 22 55 chr10 82716108 82716199 -57600566 - L2 LINE L2 0 3313 3226 1192 241 37 25 chr10 82716210 82716645 -57600120 + L1MC5 LINE L1 7464 7903 -58 244 233 33 0 chr10 82716895 82716955 -57599810 + AluJ/FRAM SINE Alu 233 294 -8 1987 129 0 4 chr10 82716966 82717244 -57599521 + AluSx SINE Alu 36 312 0 406 359 22 17 chr10 82717712 82717893 -57598872 - L2 LINE L2 -225 3047 2866 2065 67 21 42 chr10 82717914 82718198 -57598567 + AluSg SINE Alu 1 278 -32 225 0 0 0 chr10 82718198 82718223 -57598542 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2492 52 0 10 chr10 82718277 82718582 -57598183 - AluY SINE Alu -9 302 1 1088 331 154 9 chr10 82718835 82719621 -57597144 + L2 LINE L2 2078 2977 -337 2723 193 72 25 chr10 82719671 82720308 -57596457 + LTR65 LTR ERV1 3 669 0 182 246 35 35 chr10 82720308 82720365 -57596400 + L2 LINE L2 3025 3081 -191 2332 93 0 0 chr10 82720974 82721285 -57595480 - AluY SINE Alu 0 311 1 198 189 0 0 chr10 82721473 82721510 -57595255 + L2 LINE L2 3277 3313 0 2178 95 0 0 chr10 82722119 82722415 -57594350 + AluY SINE Alu 9 304 -7 333 269 109 32 chr10 82722860 82723016 -57593749 + MIR SINE MIR 94 261 -1 1598 166 49 7 chr10 82723072 82723356 -57593409 - Tigger3b DNA MER2_type -2 1229 934 1510 122 0 34 chr10 82723357 82723594 -57593171 + AluJb SINE Alu 1 229 -83 1981 159 0 0 chr10 82723609 82723918 -57592847 - AluSx SINE Alu -3 309 1 31 0 0 0 chr10 82723932 82723963 -57592802 + AT_rich Low_complexity Low_complexity 1 31 0 962 178 11 6 chr10 82723997 82724177 -57592588 + FAM SINE Alu 1 45 -4 2987 159 50 10 chr10 82724177 82724692 -57592073 - Tigger3b DNA MER2_type -695 536 1 1811 185 147 25 chr10 82724769 82724833 -57591932 - MLT1D LTR MaLR -2 503 448 1697 175 3 7 chr10 82724833 82725142 -57591623 + AluJb SINE Alu 1 308 -4 1811 185 147 25 chr10 82725142 82725525 -57591240 - MLT1D LTR MaLR -57 448 1 1009 186 23 9 chr10 82725884 82726099 -57590666 - AluJo SINE Alu -6 306 89 1036 140 12 0 chr10 82726106 82726270 -57590495 + MSTB1 LTR MaLR 23 188 -244 597 167 0 0 chr10 82726291 82726381 -57590384 - AluJo SINE Alu -221 91 2 1630 156 16 0 chr10 82726381 82726637 -57590128 + MSTB1 LTR MaLR 173 432 0 2080 143 30 33 chr10 82726642 82727035 -57589730 - L1MB4 LINE L1 -32 6148 5757 890 130 0 0 chr10 82727041 82727172 -57589593 - AluSq/x SINE Alu -181 131 1 8039 211 47 43 chr10 82727172 82727296 -57589469 - L1MB4 LINE L1 -412 5768 5646 2228 153 51 12 chr10 82727296 82727707 -57589058 - MSTA LTR MaLR 0 428 2 8039 211 47 43 chr10 82727707 82728064 -57588701 - L1MB4 LINE L1 -534 5646 5292 308 119 0 0 chr10 82728064 82728106 -57588659 - MSTA LTR MaLR 0 428 387 8039 211 47 43 chr10 82728106 82730227 -57586538 - L1MB4 LINE L1 -888 5292 3118 2288 154 48 10 chr10 82730631 82731047 -57585718 + MSTB1 LTR MaLR 1 432 0 665 276 100 17 chr10 82731563 82731802 -57584963 - MLT1L LTR MaLR -33 582 324 447 306 56 60 chr10 82732098 82732350 -57584415 + L2 LINE L2 719 969 -2345 806 249 92 29 chr10 82732350 82732623 -57584142 - MLT1L LTR MaLR -324 291 2 321 348 12 37 chr10 82732753 82732917 -57583848 + MIR SINE MIR 49 208 -54 822 183 0 43 chr10 82733517 82733681 -57583084 + AluJb SINE Alu 130 286 -26 2539 32 0 10 chr10 82734170 82734478 -57582287 + AluY SINE Alu 1 305 -6 1464 196 38 46 chr10 82734889 82735261 -57581504 - MLT1A2 LTR MaLR 0 374 6 283 319 0 0 chr10 82737250 82737344 -57579421 + C-rich Low_complexity Low_complexity 1 94 0 259 170 22 39 chr10 82738867 82739049 -57577716 + (CA)n Simple_repeat Simple_repeat 2 180 0 855 249 90 34 chr10 82741488 82741842 -57574923 + MLT1A2 LTR MaLR 1 374 0 251 302 103 0 chr10 82742560 82742686 -57574079 - MIR SINE MIR -31 231 93 658 244 57 122 chr10 82749500 82749959 -57566806 - MER63C DNA MER1_type -419 511 83 2177 90 0 0 chr10 82750205 82750484 -57566281 + AluSx SINE Alu 1 279 -33 1302 223 96 47 chr10 82752285 82752711 -57564054 - MER101 LTR ERV1 -19 455 9 1296 209 34 4 chr10 82752986 82753254 -57563511 - LTR43 LTR ERV1 -132 470 195 746 219 49 34 chr10 82753581 82753786 -57562979 - MER63A DNA MER1_type -2 208 1 2233 99 3 3 chr10 82755520 82755832 -57560933 - AluSx SINE Alu 0 312 1 852 254 44 44 chr10 82757455 82757703 -57559062 + MIR SINE MIR 10 257 -5 284 315 56 0 chr10 82757992 82758100 -57558665 + MLT1H LTR MaLR 410 523 -26 197 305 12 37 chr10 82758233 82758315 -57558450 + L2 LINE L2 2231 2310 -1004 2365 90 0 0 chr10 82758445 82758756 -57558009 + AluY SINE Alu 1 311 0 578 328 80 13 chr10 82758854 82759168 -57557597 - LTR16A LTR ERVL -95 355 21 481 311 197 3 chr10 82759813 82760102 -57556663 - MLT1I LTR MaLR 0 409 65 1874 101 14 28 chr10 82763731 82764053 -57552712 - AluSq SINE Alu 0 318 1 1248 183 84 22 chr10 82766975 82767249 -57549516 - AluJb SINE Alu -11 291 1 519 258 94 81 chr10 82767291 82768129 -57548636 - L1M4 LINE L1 -876 5270 4422 1208 268 73 54 chr10 82768206 82768959 -57547806 - L1M4 LINE L1 -2638 3508 2722 631 64 11 11 chr10 82768959 82769053 -57547712 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1208 268 73 54 chr10 82769053 82769482 -57547283 - L1M4 LINE L1 -3424 2722 2303 184 30 61 0 chr10 82769531 82769564 -57547201 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 350 246 53 35 chr10 82769564 82769637 -57547128 + L1MC4 LINE L1 6610 6719 -1323 * 360 294 63 0 chr10 82769578 82769735 -57547030 - L1MC4 LINE L1 -1337 6705 6586 * 365 310 9 17 chr10 82769711 82769827 -57546938 + L1MC4 LINE L1 6589 6703 -1339 228 213 0 0 chr10 82769759 82769820 -57546945 + (TA)n Simple_repeat Simple_repeat 2 62 0 314 340 10 0 chr10 82769820 82769846 -57546919 - L1MC4 LINE L1 -1336 6706 6617 * 328 240 0 62 chr10 82769823 82769919 -57546846 + L1MC4 LINE L1 6614 6703 -1339 2571 114 0 10 chr10 82770118 82770505 -57546260 + L1PA13 LINE L1 5777 6159 -4 865 139 0 0 chr10 82770596 82770733 -57546032 + AluSg/x SINE Alu 168 304 -8 262 188 0 0 chr10 82771577 82771641 -57545124 - L1MA2 LINE L1 0 6304 6241 22 0 0 0 chr10 82772060 82772082 -57544683 + AT_rich Low_complexity Low_complexity 1 22 0 1688 71 9 0 chr10 82772622 82772848 -57543917 + L1PA6 LINE L1 5920 6147 -7 1345 246 77 48 chr10 82773352 82774136 -57542629 + L1ME1 LINE L1 4985 5788 -378 360 0 0 0 chr10 82774150 82774190 -57542575 + (CA)n Simple_repeat Simple_repeat 1 40 0 3543 202 62 37 chr10 82774198 82775502 -57541263 + L1MC2 LINE L1 4901 6333 -11 584 278 55 29 chr10 82775501 82775846 -57540919 + L1ME1 LINE L1 5811 6164 -2 * 21 36 0 0 chr10 82776345 82776373 -57540392 + AT_rich Low_complexity Low_complexity 1 28 0 2522 46 0 3 chr10 82777806 82778109 -57538656 + AluY SINE Alu 1 302 -9 26 0 0 0 chr10 82778357 82778383 -57538382 + AT_rich Low_complexity Low_complexity 1 26 0 235 90 26 115 chr10 82779146 82779224 -57537541 - L1MA8 LINE L1 -143 6148 6078 439 97 15 11 chr10 82779249 82779334 -57537431 - L1MA8 LINE L1 -98 6091 6010 28 48 0 0 chr10 82779355 82779397 -57537368 + AT_rich Low_complexity Low_complexity 1 42 0 377 256 26 51 chr10 82779533 82779650 -57537115 - MER5B DNA MER1_type -6 172 59 834 282 21 6 chr10 82779710 82780050 -57536715 - L1MCa LINE L1 -3516 2910 2566 956 210 59 59 chr10 82780054 82780340 -57536425 - L1MCa LINE L1 -6101 325 40 195 42 0 0 chr10 82780466 82780490 -57536275 + (A)n Simple_repeat Simple_repeat 1 24 0 269 331 71 80 chr10 82780498 82780948 -57535817 + L2 LINE L2 2827 3272 0 27 49 0 0 chr10 82782066 82782107 -57534658 + AT_rich Low_complexity Low_complexity 1 41 0 642 271 17 17 chr10 82782109 82782290 -57534475 - MIR SINE MIR -24 238 58 25 0 0 0 chr10 82782357 82782382 -57534383 + AT_rich Low_complexity Low_complexity 1 25 0 29 47 0 0 chr10 82782587 82782630 -57534135 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 82784452 82784493 -57532272 + AT_rich Low_complexity Low_complexity 1 41 0 803 252 123 27 chr10 82784859 82785232 -57531533 + MLT1C LTR MaLR 54 462 -5 1330 213 57 65 chr10 82785466 82785837 -57530928 + MLT1A2 LTR MaLR 1 368 -6 2285 59 0 39 chr10 82786730 82787037 -57529728 + AluY SINE Alu 1 295 -16 342 172 0 0 chr10 82787072 82787136 -57529629 - L1MC1 LINE L1 -16 6317 6254 346 251 53 18 chr10 82787171 82787342 -57529423 + (TA)n Simple_repeat Simple_repeat 1 177 0 1745 200 53 36 chr10 82787342 82787894 -57528871 - L1MB4 LINE L1 -2 6178 5710 993 285 115 64 chr10 82789246 82789550 -57527215 - L2 LINE L2 0 3313 3026 2390 127 5 16 chr10 82789550 82789929 -57526836 + THE1C LTR MaLR 1 375 0 993 285 115 64 chr10 82789929 82790014 -57526751 - L2 LINE L2 -287 3026 2947 1670 212 11 30 chr10 82790014 82790386 -57526379 + MLT1A1 LTR MaLR 1 365 0 993 285 115 64 chr10 82790386 82790788 -57525977 - L2 LINE L2 -366 2947 2476 835 323 168 11 chr10 82790832 82791386 -57525379 - L2 LINE L2 -2362 952 312 38 0 0 0 chr10 82791609 82791647 -57525118 + AT_rich Low_complexity Low_complexity 1 38 0 237 354 83 0 chr10 82791706 82791802 -57524963 + MIR SINE MIR 47 150 -112 26 30 0 0 chr10 82791956 82791989 -57524776 + AT_rich Low_complexity Low_complexity 1 33 0 293 338 35 0 chr10 82792028 82792173 -57524592 - L1ME3 LINE L1 -17 6145 5996 946 278 45 12 chr10 82792194 82792618 -57524147 - L1ME3 LINE L1 -245 5919 5482 751 143 0 17 chr10 82792624 82792743 -57524022 - FRAM SINE Alu -19 157 41 471 292 16 3 chr10 82792749 82793038 -57523727 - L1ME3 LINE L1 -676 5486 5191 * 4205 172 41 5 chr10 82793035 82793906 -57522859 - L1MB1 LINE L1 0 6168 5266 325 274 61 30 chr10 82793963 82794127 -57522638 - L1MB1 LINE L1 -1012 5134 4966 234 207 118 178 chr10 82794274 82794409 -57522356 - MER5B DNA MER1_type -2 176 50 876 200 0 0 chr10 82794418 82794563 -57522202 - FRAM SINE Alu -30 146 2 269 254 16 0 chr10 82794564 82794627 -57522138 - MER5B DNA MER1_type -114 64 1 24 53 0 0 chr10 82796352 82796390 -57520375 + AT_rich Low_complexity Low_complexity 1 38 0 417 247 170 0 chr10 82796453 82796635 -57520130 - L1MB1 LINE L1 -1557 4589 4377 1312 195 3 58 chr10 82796636 82796949 -57519816 - AluJo SINE Alu -16 296 1 1946 248 61 56 chr10 82796982 82797868 -57518897 - L1MB1 LINE L1 -1997 4149 3254 2278 119 10 0 chr10 82797868 82798178 -57518587 - AluSq SINE Alu 0 313 1 1946 248 61 56 chr10 82798178 82798423 -57518342 - L1MB1 LINE L1 -2892 3254 3012 * 3902 222 15 18 chr10 82798403 82799413 -57517352 - L1MD1 LINE L1 0 6636 5630 295 248 50 40 chr10 82799397 82799498 -57517267 - L1MD1 LINE L1 -5549 991 890 * 215 238 0 0 chr10 82799716 82799758 -57517007 + T-rich Low_complexity Low_complexity 3 44 0 1402 111 48 5 chr10 82799964 82800172 -57516593 - AluSp SINE Alu 0 313 97 2366 243 103 22 chr10 82800200 82801580 -57515185 + L1M4c LINE L1 1434 2925 -3457 262 321 69 0 chr10 82803175 82803306 -57513459 - MIR3 SINE MIR -36 172 33 413 230 75 79 chr10 82803487 82803668 -57513097 + MIR SINE MIR 1 174 -65 2090 133 17 0 chr10 82803998 82804300 -57512465 - AluSq SINE Alu -6 307 1 299 305 59 54 chr10 82804476 82804679 -57512086 - L2 LINE L2 -1406 1908 1705 230 207 0 17 chr10 82804733 82804791 -57511974 - LTR67 LTR ERVL -10 547 491 2188 116 0 29 chr10 82804792 82805102 -57511663 + AluSx SINE Alu 1 301 -11 989 188 6 0 chr10 82805102 82805278 -57511487 + AluSc SINE Alu 132 308 -1 189 0 0 0 chr10 82806394 82806415 -57510350 + (GCTG)n Simple_repeat Simple_repeat 4 24 0 1073 248 108 14 chr10 82806744 82807172 -57509593 + MLT1J LTR MaLR 4 471 -40 438 20 0 0 chr10 82807766 82807817 -57508948 + (CATAT)n Simple_repeat Simple_repeat 4 54 0 30 0 0 0 chr10 82808075 82808105 -57508660 + AT_rich Low_complexity Low_complexity 1 30 0 1184 107 146 5 chr10 82808404 82808610 -57508155 + MER46A DNA MER2_type 2 236 0 706 191 0 8 chr10 82808798 82808924 -57507841 + FLAM_A SINE Alu 1 125 -8 922 129 14 0 chr10 82809264 82809403 -57507362 + FLAM_C SINE Alu 1 141 -2 303 203 58 0 chr10 82809856 82809925 -57506840 + MLT1J LTR MaLR 394 466 -45 369 324 29 9 chr10 82810189 82810399 -57506366 + MLT1K LTR MaLR 374 587 -1 564 224 60 16 chr10 82811019 82811202 -57505563 - MLT1K LTR MaLR 0 588 398 2135 93 0 0 chr10 82811317 82811618 -57505147 - AluSx SINE Alu 0 314 14 328 257 20 3 chr10 82811694 82811865 -57504900 - MLT1K LTR MaLR -359 229 4 628 259 132 74 chr10 82812666 82812871 -57503894 - MLT1I LTR MaLR -7 402 210 2864 142 12 10 chr10 82812871 82813357 -57503408 - L1PA16 LINE L1 -5 6161 5675 628 259 132 74 chr10 82813357 82813530 -57503235 - MLT1I LTR MaLR -199 210 2 228 293 32 38 chr10 82813706 82813863 -57502902 + MLT1J LTR MaLR 258 413 -98 476 264 3 2 chr10 82814024 82814148 -57502617 + MIR SINE MIR 30 154 -54 230 309 45 27 chr10 82814433 82814543 -57502222 + MLT1L LTR MaLR 422 533 -82 289 190 35 0 chr10 82814673 82814731 -57502034 + HsTC2 DNA Tc2 1836 1895 -3 2276 111 3 0 chr10 82814847 82815154 -57501611 + AluSq SINE Alu 1 308 -5 2512 137 47 5 chr10 82816496 82816905 -57499860 + MSTB LTR MaLR 1 426 0 455 273 58 81 chr10 82818852 82819248 -57497517 - MLT1K LTR MaLR -192 396 10 197 206 281 0 chr10 82820086 82820190 -57496575 + MIR SINE MIR 15 150 -58 607 153 114 30 chr10 82821486 82821617 -57495148 + MLT1D LTR MaLR 14 155 -350 4088 80 26 4 chr10 82821619 82822154 -57494611 - LTR6A LTR ERV1 -17 547 1 753 209 240 28 chr10 82822154 82822431 -57494334 + MLT1D LTR MaLR 169 505 0 265 248 56 96 chr10 82823326 82823451 -57493314 - MIR SINE MIR -127 135 16 498 270 37 18 chr10 82825421 82825584 -57491181 - MIR SINE MIR -77 185 20 492 18 0 0 chr10 82825601 82825658 -57491107 + (TG)n Simple_repeat Simple_repeat 2 58 0 182 262 82 0 chr10 82826168 82826229 -57490536 - MIR SINE MIR -80 182 117 452 224 28 9 chr10 82828342 82828449 -57488316 - MER5A DNA MER1_type -77 112 4 216 250 150 30 chr10 82829187 82829287 -57487478 + MIR3 SINE MIR 45 156 -52 305 327 96 21 chr10 82829608 82829889 -57486876 - L3 LINE CR1 -87 1490 1189 197 204 45 23 chr10 82830820 82830864 -57485901 - MIR SINE MIR -76 132 88 1497 121 5 5 chr10 82830929 82831152 -57485613 + AluSx SINE Alu 1 223 -89 198 0 0 0 chr10 82831162 82831184 -57485581 + (A)n Simple_repeat Simple_repeat 1 22 0 2363 71 0 0 chr10 82831185 82831479 -57485286 + AluY SINE Alu 1 294 -17 2117 117 7 0 chr10 82831485 82831792 -57484973 + AluSc SINE Alu 1 309 0 2285 92 0 9 chr10 82833601 82833917 -57482848 - AluSq SINE Alu 0 313 1 2158 69 0 17 chr10 82834109 82834429 -57482336 - AluY SINE Alu 0 315 1 966 185 181 32 chr10 82834880 82835345 -57481420 - L1M4b LINE L1 -1479 5478 4945 723 201 46 23 chr10 82835347 82835521 -57481244 + L1M4 LINE L1 4141 4318 -1828 * 766 251 79 68 chr10 82835520 82835887 -57480878 - L1M4b LINE L1 -2001 4956 4586 198 0 0 0 chr10 82835974 82835996 -57480769 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 1454 204 32 0 chr10 82836005 82836313 -57480452 + AluJb SINE Alu 1 317 0 218 79 0 26 chr10 82836367 82836405 -57480360 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 1089 216 48 12 chr10 82836479 82836812 -57479953 - L1M4b LINE L1 -3435 3522 3178 355 296 60 36 chr10 82836876 82837326 -57479439 - L1M4b LINE L1 -4078 3060 2600 441 271 59 44 chr10 82837332 82837479 -57479286 - L1M4b LINE L1 -4440 2517 2374 1813 156 23 7 chr10 82837479 82837786 -57478979 - AluJb SINE Alu 0 312 1 441 271 59 44 chr10 82837786 82837978 -57478787 - L1M4b LINE L1 -4583 2374 2173 352 155 258 21 chr10 82837985 82838082 -57478683 + FLAM_C SINE Alu 9 128 -5 227 250 50 0 chr10 82838087 82838147 -57478618 + GA-rich Low_complexity Low_complexity 2 64 0 553 248 85 43 chr10 82838165 82838230 -57478535 - L1M4b LINE L1 -4928 2210 2149 2099 107 0 13 chr10 82838230 82838538 -57478227 + AluSx SINE Alu 1 304 -8 553 248 85 43 chr10 82838538 82838941 -57477824 - L1M4b LINE L1 -4989 2149 1582 2037 75 16 75 chr10 82840057 82840240 -57476525 - AluSp SINE Alu -11 302 145 2296 76 7 0 chr10 82840240 82840541 -57476224 - AluSp SINE Alu -10 303 1 2037 75 16 75 chr10 82840541 82840678 -57476087 - AluSp SINE Alu -168 145 1 437 287 19 32 chr10 82840859 82841016 -57475749 - MLT1H LTR MaLR -387 162 8 233 297 47 47 chr10 82841268 82841396 -57475369 - LTR33A LTR ERVL -339 184 57 496 267 27 135 chr10 82843114 82843522 -57473243 - MER63C DNA MER1_type -419 511 148 * 1249 169 8 40 chr10 82843508 82843757 -57473008 - MER39B LTR ERV1 -409 244 4 269 380 37 12 chr10 82843760 82843923 -57472842 + L2 LINE L2 3106 3272 0 229 292 0 0 chr10 82846220 82846268 -57470497 - MIR SINE MIR -164 98 51 220 118 20 20 chr10 82846448 82846499 -57470266 + CT-rich Low_complexity Low_complexity 1 51 0 279 299 64 19 chr10 82846865 82847022 -57469743 - LTR41 LTR ERVL -609 164 1 234 0 0 0 chr10 82847152 82847178 -57469587 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 342 0 0 0 chr10 82847177 82847215 -57469550 + (CA)n Simple_repeat Simple_repeat 1 38 0 980 253 120 41 chr10 82847230 82847260 -57469505 - L1M4 LINE L1 -1537 4609 4583 2373 53 0 31 chr10 82847260 82847579 -57469186 - AluY SINE Alu 0 311 3 980 253 120 41 chr10 82847579 82848106 -57468659 - L1M4 LINE L1 -1563 4583 4008 2106 112 3 0 chr10 82848315 82848610 -57468155 + AluSp SINE Alu 1 296 -17 422 149 35 0 chr10 82848627 82848714 -57468051 - L1MB8 LINE L1 0 6178 6089 3525 210 63 12 chr10 82849187 82850067 -57466698 + L1ME2 LINE L1 5222 6140 -24 1577 153 54 27 chr10 82850328 82850623 -57466142 - AluJo SINE Alu -7 305 3 1861 147 0 0 chr10 82851574 82851859 -57464906 + AluJb SINE Alu 11 295 -17 315 272 191 14 chr10 82851910 82852057 -57464708 + L1ME4a LINE L1 4477 4649 -1497 3352 149 32 69 chr10 82852074 82852786 -57463979 + L1MB8 LINE L1 5451 6136 -42 410 317 155 39 chr10 82852912 82853455 -57463310 + L1ME4a LINE L1 4793 5398 -748 2127 136 0 0 chr10 82853484 82853794 -57462971 + AluSx SINE Alu 1 310 -2 318 372 54 14 chr10 82853959 82854182 -57462583 + L1ME4a LINE L1 5781 6012 -109 1023 135 0 29 chr10 82854183 82854353 -57462412 - FRAM SINE Alu -12 164 1 1592 157 31 14 chr10 82854499 82854792 -57461973 + AluJb SINE Alu 1 298 -14 410 147 15 0 chr10 82854809 82854877 -57461888 + FLAM_A SINE Alu 39 107 -35 338 313 80 27 chr10 82854881 82855031 -57461734 + L1ME4a LINE L1 5924 6081 -40 1658 166 18 0 chr10 82855046 82855351 -57461414 + AluJo SINE Alu 1 310 0 2231 108 0 9 chr10 82855386 82855701 -57461064 - AluSx SINE Alu 0 312 1 342 218 27 55 chr10 82856352 82856462 -57460303 + LTR33A LTR ERVL 415 521 -2 811 112 15 0 chr10 82857099 82857233 -57459532 + (GAAA)n Simple_repeat Simple_repeat 1 136 0 570 169 89 32 chr10 82857270 82857394 -57459371 + MLT1K LTR MaLR 456 586 -2 234 319 232 7 chr10 82857448 82857586 -57459179 + L2 LINE L2 3100 3268 -4 1770 186 61 3 chr10 82857966 82858311 -57458454 - MLT1A1 LTR MaLR 0 365 1 199 286 36 0 chr10 82859598 82859654 -57457111 + L2 LINE L2 3234 3291 -22 1990 133 0 0 chr10 82860264 82860558 -57456207 + AluSx SINE Alu 1 294 -18 2068 122 3 0 chr10 82861322 82861618 -57455147 + AluSp SINE Alu 1 297 -16 842 252 101 49 chr10 82861720 82862125 -57454640 + L1MCc LINE L1 24 449 -5974 1737 217 108 65 chr10 82862319 82862951 -57453814 + L1MCc LINE L1 740 1398 -5025 29 78 0 0 chr10 82863777 82863841 -57452924 + AT_rich Low_complexity Low_complexity 1 64 0 289 292 26 0 chr10 82863918 82864031 -57452734 + L1MC/D LINE L1 5749 5864 -1944 304 308 67 10 chr10 82864470 82864574 -57452191 - L2 LINE L2 -2 3270 3161 845 134 0 8 chr10 82864609 82864743 -57452022 + FLAM_C SINE Alu 7 139 -4 1212 204 11 15 chr10 82864748 82865013 -57451752 + L1MB8 LINE L1 4856 5119 -1027 3994 143 17 14 chr10 82865013 82865703 -57451062 + L1MB8 LINE L1 5475 6166 -12 430 297 198 0 chr10 82865780 82865982 -57450783 - L2 LINE L2 -252 3061 2820 1008 311 170 35 chr10 82866305 82867163 -57449602 - L2 LINE L2 -727 2587 1614 251 352 71 6 chr10 82867402 82867584 -57449181 + L2 LINE L2 2495 2688 -626 1412 176 149 10 chr10 82867585 82867881 -57448884 + MLT1F1 LTR MaLR 100 436 -131 2262 87 7 0 chr10 82868525 82868823 -57447942 + AluSp SINE Alu 1 300 -13 26 0 0 0 chr10 82868826 82868852 -57447913 + AT_rich Low_complexity Low_complexity 1 26 0 1781 153 0 7 chr10 82869190 82869491 -57447274 - AluJo SINE Alu -13 299 1 355 304 0 26 chr10 82870764 82870879 -57445886 - L3 LINE CR1 -263 1314 1203 2467 70 0 0 chr10 82870897 82871198 -57445567 + AluY SINE Alu 1 301 -10 1919 145 7 7 chr10 82871873 82872169 -57444596 - AluJb SINE Alu -16 296 1 590 159 182 0 chr10 82872192 82872324 -57444441 - L1PA16 LINE L1 -9 6157 6002 2227 123 0 0 chr10 82872336 82872638 -57444127 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 82873273 82873294 -57443471 + AT_rich Low_complexity Low_complexity 1 21 0 327 211 0 26 chr10 82873967 82874043 -57442722 + MER21B LTR ERV1 1 74 -789 1570 176 0 86 chr10 82874142 82874466 -57442299 + AluJb SINE Alu 1 296 -16 2265 96 0 0 chr10 82874899 82875191 -57441574 - AluSg SINE Alu -18 292 1 21 0 0 0 chr10 82875198 82875219 -57441546 + AT_rich Low_complexity Low_complexity 1 21 0 2410 50 3 7 chr10 82875462 82875759 -57441006 - AluY SINE Alu -15 296 1 416 319 85 26 chr10 82876326 82876633 -57440132 - L1ME4a LINE L1 -296 5825 5501 307 195 6 24 chr10 82876699 82876821 -57439944 - L1ME4a LINE L1 -759 5392 5279 326 325 83 18 chr10 82876933 82877102 -57439663 - L1ME4a LINE L1 -1077 5069 4890 31 0 0 0 chr10 82877121 82877152 -57439613 + AT_rich Low_complexity Low_complexity 1 31 0 1993 152 3 0 chr10 82877265 82877562 -57439203 + AluSq SINE Alu 5 302 -11 285 221 0 0 chr10 82877941 82878009 -57438756 - L1ME3 LINE L1 -2 6160 6093 294 172 108 43 chr10 82878188 82878281 -57438484 + L1MC5 LINE L1 7808 7906 -55 299 314 86 0 chr10 82878421 82878526 -57438239 + MIR SINE MIR 32 145 -117 22 56 0 0 chr10 82878661 82878697 -57438068 + AT_rich Low_complexity Low_complexity 1 36 0 4301 123 34 3 chr10 82878768 82879075 -57437690 - L1PA16 LINE L1 -3 6163 5867 219 36 0 0 chr10 82879075 82879103 -57437662 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1754 176 0 7 chr10 82879103 82879382 -57437383 - AluJb SINE Alu -30 282 6 4301 123 34 3 chr10 82879382 82879756 -57437009 - L1PA16 LINE L1 -298 5868 5460 1922 163 7 13 chr10 82879757 82880058 -57436707 + AluJb SINE Alu 1 299 -13 201 162 0 0 chr10 82880241 82880278 -57436487 + T-rich Low_complexity Low_complexity 1 37 0 215 231 11 33 chr10 82881281 82881372 -57435393 + (CGG)n Simple_repeat Simple_repeat 3 91 0 355 333 38 13 chr10 82882209 82882368 -57434397 - L1ME4a LINE L1 -1368 4778 4616 535 145 0 0 chr10 82882374 82882457 -57434308 - AluJ/FLAM SINE Alu -225 87 5 1196 269 111 21 chr10 82882471 82883129 -57433636 - L1ME4a LINE L1 -1540 4606 3890 6937 239 87 39 chr10 82883150 82883848 -57432917 - L1MC4a LINE L1 -6 7802 7139 2137 144 0 0 chr10 82883848 82884160 -57432605 - AluJb SINE Alu 0 312 1 6937 239 87 39 chr10 82884160 82884512 -57432253 - L1MC4a LINE L1 -669 7139 6805 1827 172 0 0 chr10 82884512 82884802 -57431963 + AluJb SINE Alu 1 290 -22 2398 109 0 0 chr10 82884807 82885118 -57431647 + AluSx SINE Alu 1 311 -1 6937 239 87 39 chr10 82885118 82886396 -57430369 - L1MC4a LINE L1 -1006 6802 5587 1701 171 0 0 chr10 82886396 82886653 -57430112 - AluJb SINE Alu -53 259 3 6937 239 87 39 chr10 82886653 82887614 -57429151 - L1MC4a LINE L1 -2221 5587 4673 1363 189 40 57 chr10 82887614 82887911 -57428854 - AluJo SINE Alu -20 292 1 6937 239 87 39 chr10 82887911 82888084 -57428681 - L1MC4a LINE L1 -3135 4673 4510 2019 138 13 13 chr10 82888084 82888396 -57428369 - AluSx SINE Alu 0 312 1 6937 239 87 39 chr10 82888396 82888542 -57428223 - L1MC4a LINE L1 -3298 4510 4018 1556 183 50 11 chr10 82888624 82888903 -57427862 - AluJb SINE Alu -22 290 1 527 201 33 4 chr10 82888951 82889120 -57427645 + L1MD2 LINE L1 6194 7807 -2 772 282 165 8 chr10 82889129 82889516 -57427249 + L2 LINE L2 2205 2652 -662 531 221 96 82 chr10 82889556 82889764 -57427001 + L2 LINE L2 3102 3312 -1 717 250 77 14 chr10 82890104 82890324 -57426441 - MIR SINE MIR -28 234 1 202 150 25 0 chr10 82890329 82890369 -57426396 + T-rich Low_complexity Low_complexity 3 43 0 189 319 85 11 chr10 82890413 82890507 -57426258 - MIR SINE MIR -122 140 40 194 412 0 0 chr10 82891158 82891243 -57425522 - MIR SINE MIR -133 129 45 328 291 206 14 chr10 82891825 82892048 -57424717 + L2 LINE L2 2225 2490 -824 2419 80 0 0 chr10 82892731 82893030 -57423735 + AluSg SINE Alu 1 299 -11 258 286 0 48 chr10 82893241 82893346 -57423419 + L1ME LINE L1 5724 5823 -298 2406 57 0 3 chr10 82893859 82894158 -57422607 + AluY SINE Alu 1 298 -13 2246 101 10 0 chr10 82894415 82894711 -57422054 + AluSx SINE Alu 1 299 -13 1175 171 46 14 chr10 82894724 82894940 -57421825 + 7SLRNA srpRNA srpRNA 2 224 -96 757 164 0 29 chr10 82894940 82895080 -57421685 + FLAM_C SINE Alu 6 141 -2 537 139 69 20 chr10 82895090 82895191 -57421574 + 7SLRNA srpRNA srpRNA 213 318 -2 830 212 108 9 chr10 82895231 82895443 -57421322 + MIR SINE MIR 19 251 -11 22 35 0 0 chr10 82895589 82895618 -57421147 + AT_rich Low_complexity Low_complexity 1 29 0 1502 169 65 0 chr10 82895697 82895957 -57420808 - AluJo SINE Alu -35 277 1 2005 112 7 3 chr10 82897977 82898262 -57418503 + AluSc SINE Alu 1 286 -23 2065 123 3 0 chr10 82898438 82898731 -57418034 - AluSx SINE Alu -18 294 1 2099 119 3 0 chr10 82898842 82899136 -57417629 + AluSx SINE Alu 1 295 -17 1594 161 0 70 chr10 82899148 82899446 -57417319 + AluJb SINE Alu 1 277 -35 1952 133 24 7 chr10 82899446 82899738 -57417027 - AluSq SINE Alu -14 299 2 2148 93 20 27 chr10 82899992 82900292 -57416473 + AluSx SINE Alu 1 298 -14 895 193 0 0 chr10 82900415 82900608 -57416157 - FRAM SINE Alu 0 191 1 370 320 112 24 chr10 82900660 82900866 -57415899 + L2 LINE L2 1812 2035 -1279 247 292 241 7 chr10 82900914 82901051 -57415714 - L2 LINE L2 -2 3270 3102 1968 122 62 0 chr10 82901052 82901340 -57415425 + AluSx SINE Alu 1 306 -6 224 294 70 7 chr10 82901856 82901999 -57414766 + L2 LINE L2 2140 2291 -1023 276 111 0 0 chr10 82902178 82902223 -57414542 + (T)n Simple_repeat Simple_repeat 1 45 0 688 158 87 8 chr10 82902360 82902386 -57414379 + MER30 DNA MER1_type 94 117 -113 2358 83 0 17 chr10 82902386 82902688 -57414077 + AluSx SINE Alu 1 297 -15 688 158 87 8 chr10 82902688 82902788 -57413977 + MER30 DNA MER1_type 117 230 0 244 297 0 14 chr10 82903501 82903575 -57413190 + MIR SINE MIR 6 78 -184 2132 54 0 4 chr10 82903785 82904043 -57412722 + AluY SINE Alu 39 295 -16 2511 58 0 13 chr10 82904048 82904360 -57412405 + AluY SINE Alu 1 308 -3 2204 125 0 3 chr10 82904814 82905126 -57411639 + AluY SINE Alu 1 311 0 278 302 71 8 chr10 82905135 82905261 -57411504 - MER94 DNA DNA 0 134 1 1791 173 3 37 chr10 82905743 82906066 -57410699 + AluJb SINE Alu 1 312 0 233 224 0 0 chr10 82906171 82906229 -57410536 + A-rich Low_complexity Low_complexity 1 58 0 234 216 0 0 chr10 82906271 82906322 -57410443 + L2 LINE L2 2405 2455 -859 188 408 0 0 chr10 82906461 82906559 -57410206 - MIR SINE MIR -157 105 8 22 0 0 0 chr10 82906785 82906807 -57409958 + AT_rich Low_complexity Low_complexity 1 22 0 960 171 38 46 chr10 82906839 82906894 -57409871 - L1MA6 LINE L1 0 6300 6246 2287 112 0 0 chr10 82906894 82907189 -57409576 - AluSx SINE Alu -17 295 1 960 171 38 46 chr10 82907189 82907373 -57409392 - L1MA6 LINE L1 -54 6246 6063 1488 136 53 4 chr10 82907373 82907601 -57409164 + AluSq SINE Alu 66 304 -9 1605 187 11 7 chr10 82907654 82907937 -57408828 - AluJb SINE Alu -28 284 1 1319 170 87 73 chr10 82907937 82908237 -57408528 - AluJb SINE Alu -7 305 2 342 255 42 0 chr10 82908240 82908374 -57408391 - L1MEc LINE L1 -4878 1235 1133 643 144 0 0 chr10 82908382 82908472 -57408293 - AluJ/FLAM SINE Alu -215 97 8 2083 147 3 6 chr10 82908502 82908814 -57407951 - AluSx SINE Alu -1 311 1 678 228 23 49 chr10 82908817 82909116 -57407649 - L1MEc LINE L1 -4952 1275 942 1426 146 15 0 chr10 82909118 82909324 -57407441 - AluSg/x SINE Alu -22 288 80 1588 263 133 26 chr10 82909470 82910237 -57406528 - L1MEc LINE L1 -5502 894 46 233 227 15 0 chr10 82910261 82910327 -57406438 - L1MCc LINE L1 -4313 2809 2743 563 207 11 56 chr10 82910435 82910614 -57406151 - L1MCc LINE L1 -4681 2441 2271 2300 86 20 7 chr10 82910624 82910927 -57405838 - AluSc SINE Alu 0 309 3 428 123 0 41 chr10 82910929 82911002 -57405763 - AluJo/FLAM SINE Alu -180 132 63 654 232 89 68 chr10 82911110 82911537 -57405228 - L1MCc LINE L1 -4921 2201 1766 246 174 0 0 chr10 82911541 82911587 -57405178 + CT-rich Low_complexity Low_complexity 3 48 0 723 284 56 30 chr10 82911604 82912048 -57404717 - L1MCc LINE L1 -4887 1536 1129 6075 143 45 83 chr10 82912171 82913139 -57403626 + L1MC3 LINE L1 6401 7299 -486 1807 182 0 10 chr10 82913139 82913435 -57403330 + AluJo SINE Alu 2 294 -18 6075 143 45 83 chr10 82913435 82913905 -57402860 + L1MC3 LINE L1 7299 7785 0 417 294 47 64 chr10 82914368 82914773 -57401992 - L1MCc LINE L1 -6009 414 17 600 270 142 26 chr10 82914773 82915040 -57401725 + L2 LINE L2 2969 3266 -47 35 0 0 0 chr10 82915724 82915759 -57401006 + AT_rich Low_complexity Low_complexity 1 35 0 295 301 48 12 chr10 82915818 82915901 -57400864 + MIR SINE MIR 17 102 -160 1958 139 4 0 chr10 82916126 82916451 -57400314 - AluJb SINE Alu 0 328 3 4502 160 27 15 chr10 82916764 82917735 -57399030 + L1MB5 LINE L1 5191 6165 -9 1693 180 17 0 chr10 82917862 82918157 -57398608 - AluJb SINE Alu -12 300 1 1528 274 99 20 chr10 82918181 82918945 -57397820 + HAL1 LINE L1 143 967 -1540 22 0 0 0 chr10 82918972 82918994 -57397771 + AT_rich Low_complexity Low_complexity 1 22 0 1096 195 127 8 chr10 82919048 82919284 -57397481 + AluJo SINE Alu 23 286 -26 391 297 101 0 chr10 82919336 82919555 -57397210 + HAL1 LINE L1 1114 1354 -1153 2657 27 0 0 chr10 82919556 82919855 -57396910 + AluYa5 SINE Alu 1 299 -12 226 283 17 142 chr10 82920303 82920423 -57396342 + L2 LINE L2 3166 3270 -2 667 228 0 0 chr10 82920921 82921044 -57395721 + FLAM_C SINE Alu 3 125 -18 809 211 12 12 chr10 82921175 82921336 -57395429 + AluJb SINE Alu 145 305 -7 1340 74 0 0 chr10 82921464 82921647 -57395118 - AluSq SINE Alu 0 306 124 2204 112 3 6 chr10 82921647 82921961 -57394804 - AluSq SINE Alu 0 313 1 1866 158 10 0 chr10 82922372 82922663 -57394102 + AluJb SINE Alu 1 294 -18 2061 132 3 0 chr10 82922858 82923147 -57393618 - AluJb SINE Alu -15 297 8 733 215 34 0 chr10 82923642 82923791 -57392974 - MSTB LTR MaLR -272 154 1 458 162 0 0 chr10 82923791 82923865 -57392900 + L1MB4 LINE L1 6041 6114 -66 1037 181 106 0 chr10 82923915 82924114 -57392651 + AluSg/x SINE Alu 82 301 -9 860 97 53 0 chr10 82924219 82924333 -57392432 + AluSq/x SINE Alu 14 133 -179 2455 81 0 0 chr10 82924336 82924644 -57392121 + AluY SINE Alu 1 308 -3 1256 58 0 0 chr10 82924826 82924982 -57391783 + MER107 DNA MER1_type 4 159 -38 1591 103 3 103 chr10 82925122 82925424 -57391341 - AluSc SINE Alu -37 272 1 352 293 199 22 chr10 82925877 82926058 -57390707 - MIR SINE MIR -5 257 45 273 283 0 0 chr10 82926176 82926236 -57390529 + AluSp SINE Alu 132 191 -112 * 384 125 0 47 chr10 82926217 82926281 -57390484 + FLAM_A SINE Alu 69 129 -4 233 246 49 0 chr10 82926642 82926703 -57390062 + MER103 DNA DNA 2 65 -101 261 201 60 52 chr10 82926721 82926881 -57389884 + MIR SINE MIR 31 260 -2 308 189 63 53 chr10 82926892 82926987 -57389778 + MER103 DNA DNA 70 165 -1 2066 137 0 13 chr10 82927090 82927396 -57389369 - AluJb SINE Alu -10 302 1 2272 102 3 0 chr10 82927477 82927772 -57388993 - AluSp SINE Alu -17 296 1 690 319 124 40 chr10 82927905 82928910 -57387855 + L2 LINE L2 926 2015 -1299 277 253 162 10 chr10 82928903 82929002 -57387763 - L2 LINE L2 -5 3267 3154 * 387 261 87 53 chr10 82929186 82929450 -57387315 + L2 LINE L2 1716 1988 -1326 194 243 54 14 chr10 82929492 82929566 -57387199 + L2 LINE L2 2144 2220 -1094 2204 95 3 3 chr10 82929566 82929860 -57386905 + AluSq SINE Alu 2 295 -18 1040 156 13 0 chr10 82929862 82930016 -57386749 + AluJb SINE Alu 134 289 -23 2284 109 0 0 chr10 82930580 82930884 -57385881 - AluSx SINE Alu -2 310 7 272 86 0 0 chr10 82930988 82931023 -57385742 + U2 snRNA snRNA 1 35 -153 21 0 0 0 chr10 82931023 82931044 -57385721 + AT_rich Low_complexity Low_complexity 1 21 0 1893 152 10 0 chr10 82931308 82931604 -57385161 - AluSx SINE Alu -13 299 1 4125 141 21 80 chr10 82931618 82931997 -57384768 - L1MB7 LINE L1 -19 6165 5765 2243 123 3 0 chr10 82931997 82932307 -57384458 - AluSp SINE Alu -2 311 1 4125 141 21 80 chr10 82932307 82932687 -57384078 - L1MB7 LINE L1 -419 5765 5364 231 36 0 0 chr10 82932687 82932715 -57384050 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1384 132 136 8 chr10 82932718 82932968 -57383797 - AluJb SINE Alu -30 282 1 4125 141 21 80 chr10 82932968 82933098 -57383667 - L1MB7 LINE L1 -822 5362 5324 2068 103 0 10 chr10 82933098 82933390 -57383375 - AluY SINE Alu -16 295 7 751 167 0 47 chr10 82933545 82933695 -57383070 + AluJb SINE Alu 161 303 -9 2070 123 3 0 chr10 82933710 82934003 -57382762 + AluSg SINE Alu 1 294 -16 308 306 46 0 chr10 82934401 82934509 -57382256 + MIR SINE MIR 149 261 -1 517 400 19 13 chr10 82934665 82934980 -57381785 - MLT1K LTR MaLR -235 353 37 405 268 56 28 chr10 82935338 82935480 -57381285 + LTR50 LTR ERVL 463 608 -187 293 321 107 0 chr10 82935885 82936016 -57380749 + MIR SINE MIR 56 200 -62 31 88 0 0 chr10 82936097 82936177 -57380588 + AT_rich Low_complexity Low_complexity 1 80 0 412 297 58 13 chr10 82936342 82936497 -57380268 - MER63 DNA MER1_type -273 789 2 701 281 97 26 chr10 82936771 82937081 -57379684 - MER58B DNA MER1_type 0 341 10 289 120 0 60 chr10 82937182 82937232 -57379533 - MLT2B1 LTR ERVL 0 554 508 396 203 16 31 chr10 82937236 82937364 -57379401 + (CAGAGA)n Simple_repeat Simple_repeat 4 129 0 1911 209 139 5 chr10 82937364 82937780 -57378985 - MLT2B1 LTR ERVL -48 472 1 250 172 47 0 chr10 82937838 82937902 -57378863 + CT-rich Low_complexity Low_complexity 2 68 0 547 341 123 63 chr10 82938413 82938869 -57377896 + L3 LINE CR1 447 874 -703 883 269 23 0 chr10 82938869 82939085 -57377680 + MER58A DNA MER1_type 1 221 -3 547 341 123 63 chr10 82939085 82939638 -57377127 + L3 LINE CR1 874 1516 -61 21 0 0 0 chr10 82939804 82939825 -57376940 + AT_rich Low_complexity Low_complexity 1 21 0 246 32 0 0 chr10 82939848 82939879 -57376886 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 2125 100 0 0 chr10 82939882 82940161 -57376604 - AluSx SINE Alu -33 279 1 2398 73 10 3 chr10 82940881 82941182 -57375583 - AluSp SINE Alu -10 303 1 384 272 101 1 chr10 82941609 82941745 -57375020 - MIR SINE MIR -62 146 42 558 308 122 5 chr10 82942193 82942414 -57374351 - MIR SINE MIR -15 247 1 278 299 10 21 chr10 82943073 82943170 -57373595 - MIR SINE MIR -71 191 96 1627 173 0 45 chr10 82943316 82943629 -57373136 + AluJb SINE Alu 1 299 -13 2356 53 0 13 chr10 82943792 82944091 -57372674 + AluY SINE Alu 2 296 -15 1373 61 0 11 chr10 82944104 82944285 -57372480 + AluY SINE Alu 131 309 -2 417 198 33 33 chr10 82945136 82945227 -57371538 - MIR SINE MIR -125 137 47 235 234 0 0 chr10 82946516 82946563 -57370202 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 647 181 96 18 chr10 82946747 82946913 -57369852 + L1MA10 LINE L1 6155 6333 -1 260 341 0 0 chr10 82950247 82950332 -57366433 + (TG)n Simple_repeat Simple_repeat 2 86 0 596 202 48 30 chr10 82950542 82950710 -57366055 - L1 LINE L1 -902 5244 5074 200 300 31 27 chr10 82951018 82951127 -57365638 - MIR SINE MIR -93 115 57 26 30 0 0 chr10 82951920 82951953 -57364812 + AT_rich Low_complexity Low_complexity 1 33 0 556 264 66 0 chr10 82951973 82952140 -57364625 - MER5B DNA MER1_type 0 178 1 28 0 0 0 chr10 82954223 82954251 -57362514 + AT_rich Low_complexity Low_complexity 1 28 0 226 295 16 47 chr10 82954446 82954575 -57362190 - L1ME LINE L1 -369 5752 5628 1754 209 16 14 chr10 82957543 82957911 -57358854 + L1MA8 LINE L1 5809 6177 -114 2641 39 0 0 chr10 82958075 82958383 -57358382 + AluY SINE Alu 1 308 -3 593 111 56 0 chr10 82958749 82958857 -57357908 + L1MA8 LINE L1 6178 6291 0 2327 50 6 47 chr10 82959337 82959656 -57357109 - AluY SINE Alu -5 306 1 262 286 57 0 chr10 82961398 82961468 -57355297 + MER91C DNA MER1_type 43 116 -24 201 250 97 0 chr10 82962251 82962323 -57354442 + MIR SINE MIR 176 254 -8 26 30 0 0 chr10 82963180 82963213 -57353552 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr10 82965019 82965043 -57351722 + AT_rich Low_complexity Low_complexity 1 24 0 2217 88 57 0 chr10 82966488 82966784 -57349981 + AluSp SINE Alu 1 313 0 198 271 34 0 chr10 82967050 82967109 -57349656 + MIR SINE MIR 202 262 0 322 280 104 16 chr10 82967473 82967598 -57349167 - MIR SINE MIR -107 155 20 220 247 22 22 chr10 82967775 82967864 -57348901 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 372 22 0 0 chr10 82967925 82967970 -57348795 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 0 0 0 chr10 82968063 82968090 -57348675 + AT_rich Low_complexity Low_complexity 1 27 0 1551 150 120 0 chr10 82968093 82968367 -57348398 - AluJb SINE Alu -5 307 1 6259 75 22 29 chr10 82968423 82969242 -57347523 - L1PA7 LINE L1 0 6154 5326 2535 37 7 0 chr10 82969242 82969540 -57347225 - AluY SINE Alu -11 300 1 6259 75 22 29 chr10 82969540 82969734 -57347031 - L1PA7 LINE L1 -828 5326 5132 204 274 0 0 chr10 82970162 82970213 -57346552 + (CA)n Simple_repeat Simple_repeat 1 51 0 180 111 0 0 chr10 82970740 82970767 -57345998 + (CA)n Simple_repeat Simple_repeat 2 28 0 1279 215 66 46 chr10 82970901 82971250 -57345515 + MLT1A1 LTR MaLR 10 365 0 242 319 81 31 chr10 82971305 82971465 -57345300 + MIR SINE MIR 91 258 -4 29 0 0 0 chr10 82972382 82972411 -57344354 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 82973115 82973144 -57343621 + AT_rich Low_complexity Low_complexity 1 29 0 194 286 54 77 chr10 82973704 82973872 -57342893 + MIR SINE MIR 91 254 -8 301 268 53 79 chr10 82974261 82974489 -57342276 - MIR SINE MIR 0 262 41 2266 86 33 3 chr10 82975074 82975376 -57341389 + AluSp SINE Alu 1 311 -2 22 0 0 0 chr10 82975575 82975597 -57341168 + AT_rich Low_complexity Low_complexity 1 22 0 194 62 31 0 chr10 82976142 82976174 -57340591 + (CGAGG)n Simple_repeat Simple_repeat 3 35 0 214 172 11 81 chr10 82976767 82976854 -57339911 + (CCCCG)n Simple_repeat Simple_repeat 3 83 0 25 0 0 0 chr10 82977061 82977086 -57339679 + GC_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr10 82977201 82977239 -57339526 + GC_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr10 82977348 82977381 -57339384 + GC_rich Low_complexity Low_complexity 1 33 0 325 248 50 40 chr10 82978062 82978163 -57338602 + L1MDa LINE L1 890 991 -5549 * 1543 215 22 43 chr10 82978147 82978586 -57338179 + L1MC/D LINE L1 5236 5665 -577 299 253 21 11 chr10 82978557 82978652 -57338113 + L1ME3 LINE L1 5398 5493 -669 * 691 176 0 17 chr10 82978653 82978772 -57337993 + FRAM SINE Alu 41 157 -19 1140 264 49 16 chr10 82978777 82979202 -57337563 + L1ME3 LINE L1 5481 5919 -245 309 310 55 7 chr10 82979218 82979363 -57337402 + L1ME3 LINE L1 5994 6145 -17 27 0 0 0 chr10 82979402 82979429 -57337336 + AT_rich Low_complexity Low_complexity 1 27 0 196 354 83 0 chr10 82979583 82979679 -57337086 - MIR SINE MIR -112 150 47 34 0 0 0 chr10 82979738 82979772 -57336993 + AT_rich Low_complexity Low_complexity 1 34 0 333 339 91 21 chr10 82979995 82980237 -57336528 + L2 LINE L2 312 570 -2744 2237 113 0 0 chr10 83031127 83031459 -57285306 - AluSq SINE Alu 0 313 1 2533 49 0 3 chr10 83032006 83032314 -57284451 + AluY SINE Alu 1 307 -4 26 0 0 0 chr10 83032564 83032590 -57284175 + AT_rich Low_complexity Low_complexity 1 26 0 235 90 26 115 chr10 83033352 83033430 -57283335 - L1MA8 LINE L1 -143 6148 6078 375 103 44 0 chr10 83033470 83033538 -57283227 - L1MA8 LINE L1 -211 6080 6010 377 256 26 51 chr10 83033734 83033851 -57282914 - MER5B DNA MER1_type -6 172 59 814 277 33 6 chr10 83033911 83034247 -57282518 - L1MCa LINE L1 -3516 2910 2566 965 210 45 59 chr10 83034251 83034541 -57282224 - L1MCa LINE L1 -6101 325 40 180 111 0 0 chr10 83034664 83034691 -57282074 + (A)n Simple_repeat Simple_repeat 1 27 0 232 343 85 64 chr10 83034699 83035121 -57281644 + L2 LINE L2 2827 3260 -12 225 0 0 0 chr10 83035121 83035146 -57281619 + (TA)n Simple_repeat Simple_repeat 2 26 0 232 343 85 64 chr10 83035146 83035160 -57281605 + L2 LINE L2 3260 3272 0 22 56 0 0 chr10 83036274 83036310 -57280455 + AT_rich Low_complexity Low_complexity 1 36 0 608 282 17 17 chr10 83036312 83036493 -57280272 - MIR SINE MIR -24 238 58 29 0 0 0 chr10 83036560 83036589 -57280176 + AT_rich Low_complexity Low_complexity 1 29 0 25 83 0 0 chr10 83036776 83036836 -57279929 + AT_rich Low_complexity Low_complexity 1 60 0 27 49 0 0 chr10 83038661 83038702 -57278063 + AT_rich Low_complexity Low_complexity 1 41 0 787 245 149 38 chr10 83039069 83039437 -57277328 + MLT1C LTR MaLR 54 462 -5 1305 214 56 70 chr10 83039671 83040044 -57276721 + MLT1A2 LTR MaLR 1 368 -6 2346 56 0 30 chr10 83040937 83041241 -57275524 + AluY SINE Alu 1 295 -16 356 156 0 0 chr10 83041276 83041340 -57275425 - L1MC1 LINE L1 -16 6317 6254 343 187 43 80 chr10 83041350 83041537 -57275228 + (TA)n Simple_repeat Simple_repeat 1 180 0 1806 194 53 36 chr10 83041537 83042089 -57274676 - L1MB4 LINE L1 -2 6178 5710 1024 284 115 64 chr10 83043427 83043730 -57273035 - L2 LINE L2 0 3313 3027 2393 124 5 16 chr10 83043730 83044109 -57272656 + THE1C LTR MaLR 1 375 0 1024 284 115 64 chr10 83044109 83044194 -57272571 - L2 LINE L2 -286 3027 2948 1572 217 19 27 chr10 83044194 83044562 -57272203 + MLT1A1 LTR MaLR 1 365 0 1024 284 115 64 chr10 83044562 83044964 -57271801 - L2 LINE L2 -365 2948 2476 851 314 174 11 chr10 83045008 83045559 -57271206 - L2 LINE L2 -2362 952 312 34 0 0 0 chr10 83045781 83045815 -57270950 + AT_rich Low_complexity Low_complexity 1 34 0 218 343 45 0 chr10 83045871 83045970 -57270795 + MIR SINE MIR 45 150 -105 26 30 0 0 chr10 83046124 83046157 -57270608 + AT_rich Low_complexity Low_complexity 1 33 0 304 336 34 0 chr10 83046196 83046342 -57270423 - L1ME3 LINE L1 -17 6145 5995 1031 264 65 10 chr10 83046362 83046778 -57269987 - L1ME3 LINE L1 -250 5916 5478 713 160 0 17 chr10 83046783 83046902 -57269863 - FRAM SINE Alu -19 157 41 504 281 13 4 chr10 83046908 83047198 -57269567 - L1ME3 LINE L1 -678 5486 5191 * 4025 171 60 5 chr10 83047195 83048051 -57268714 - L1MB1 LINE L1 0 6168 5266 334 258 65 32 chr10 83048148 83048272 -57268493 - L1MB1 LINE L1 -1053 5093 4966 243 206 118 176 chr10 83048418 83048554 -57268211 - MER5B DNA MER1_type -1 177 50 852 214 0 0 chr10 83048563 83048708 -57268057 - FRAM SINE Alu -30 146 2 260 270 16 0 chr10 83048709 83048772 -57267993 - MER5B DNA MER1_type -114 64 1 24 53 0 0 chr10 83050498 83050536 -57266229 + AT_rich Low_complexity Low_complexity 1 38 0 483 237 154 15 chr10 83050599 83050791 -57265974 - L1MB1 LINE L1 -1557 4589 4361 1321 195 3 50 chr10 83050791 83051094 -57265671 - AluJo SINE Alu -23 289 1 483 237 154 15 chr10 83051094 83051126 -57265639 - L1MB1 LINE L1 -1785 4361 4335 1747 253 66 57 chr10 83051127 83052009 -57264756 - L1MB1 LINE L1 -1997 4149 3254 2201 129 10 0 chr10 83052009 83052319 -57264446 - AluSq SINE Alu 0 313 1 1747 253 66 57 chr10 83052319 83052508 -57264257 - L1MB1 LINE L1 -2892 3254 3068 3966 215 17 18 chr10 83052535 83053543 -57263222 - L1MD1 LINE L1 0 6636 5630 295 248 50 40 chr10 83053527 83053628 -57263137 - L1MD1 LINE L1 -5549 991 890 * 215 238 0 0 chr10 83053841 83053883 -57262882 + T-rich Low_complexity Low_complexity 3 44 0 27 29 0 0 chr10 83054307 83054341 -57262424 + GC_rich Low_complexity Low_complexity 1 34 0 323 266 24 107 chr10 83054453 83054622 -57262143 + L1M2 LINE L1 823 977 -5872 212 0 36 0 chr10 83054898 83054926 -57261839 + (CGG)n Simple_repeat Simple_repeat 3 31 0 22 0 0 0 chr10 83056088 83056110 -57260655 + AT_rich Low_complexity Low_complexity 1 22 0 2263 86 33 3 chr10 83056312 83056616 -57260149 - AluSp SINE Alu 0 313 1 408 271 53 67 chr10 83057201 83057426 -57259339 + MIR SINE MIR 41 262 0 264 339 18 42 chr10 83057818 83057986 -57258779 - MIR SINE MIR -8 254 91 22 35 0 0 chr10 83058546 83058575 -57258190 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 83059184 83059213 -57257552 + AT_rich Low_complexity Low_complexity 1 29 0 216 339 79 30 chr10 83060132 83060297 -57256468 - MIR SINE MIR -4 258 86 1206 212 63 43 chr10 83060347 83060696 -57256069 - MLT1A1 LTR MaLR 0 365 10 180 111 0 0 chr10 83060826 83060853 -57255912 + (TG)n Simple_repeat Simple_repeat 2 28 0 249 108 0 0 chr10 83061382 83061419 -57255346 + (TG)n Simple_repeat Simple_repeat 1 37 0 6503 71 20 6 chr10 83061874 83062884 -57253881 + L1PA7 LINE L1 5132 6154 0 200 111 22 0 chr10 83063041 83063086 -57253679 + A-rich Low_complexity Low_complexity 2 47 0 300 27 0 0 chr10 83063186 83063223 -57253542 + (CA)n Simple_repeat Simple_repeat 2 38 0 231 247 21 21 chr10 83063284 83063377 -57253388 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 333 283 87 36 chr10 83063554 83063692 -57253073 + MIR SINE MIR 20 164 -98 216 0 0 0 chr10 83065234 83065258 -57251507 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 281 380 37 12 chr10 83066138 83066301 -57250464 - L2 LINE L2 0 3272 3106 1191 114 0 47 chr10 83066304 83066515 -57250250 + MER39B LTR ERV1 4 204 -449 359 249 24 106 chr10 83066540 83066948 -57249817 + MER63 DNA MER1_type 148 641 -419 225 302 103 0 chr10 83073763 83073889 -57242876 + MIR SINE MIR 93 231 -31 832 249 90 34 chr10 83074607 83074961 -57241804 - MLT1A2 LTR MaLR 0 374 1 280 204 23 6 chr10 83077400 83077572 -57239193 + (TG)n Simple_repeat Simple_repeat 2 176 0 283 319 0 0 chr10 83079095 83079189 -57237576 + G-rich Low_complexity Low_complexity 1 94 0 1421 201 32 45 chr10 83081181 83081555 -57235210 + MLT1A2 LTR MaLR 6 374 0 2913 216 58 85 chr10 83082096 83083603 -57233162 - L1MB8 LINE L1 -253 5925 4377 258 32 0 0 chr10 83083611 83083642 -57233123 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 866 173 0 0 chr10 83083642 83083766 -57232999 - AluSq/x SINE Alu -185 127 1 2913 216 58 85 chr10 83083766 83084349 -57232416 - L1MB8 LINE L1 -1801 4377 3780 1861 91 0 0 chr10 83084349 83084580 -57232185 - AluSg SINE Alu -18 292 62 1600 81 0 38 chr10 83086433 83086668 -57230097 - L1PA8 LINE L1 -8 6164 5939 186 293 134 0 chr10 83087545 83087627 -57229138 - L2 LINE L2 0 3272 3180 1179 106 0 0 chr10 83087664 83087815 -57228950 + AluSq/x SINE Alu 1 151 -161 767 231 15 10 chr10 83088227 83088426 -57228339 - L1MB3 LINE L1 -3 6180 5981 2171 111 0 0 chr10 83089350 83089638 -57227127 + AluSc SINE Alu 1 288 -21 417 39 0 0 chr10 83090757 83090808 -57225957 + (TG)n Simple_repeat Simple_repeat 2 52 0 47 44 0 0 chr10 83091101 83091169 -57225596 + AT_rich Low_complexity Low_complexity 1 68 0 295 212 121 0 chr10 83091712 83091778 -57224987 - MER58A DNA MER1_type -33 74 1 768 249 11 0 chr10 83093036 83093221 -57223544 + MER5A DNA MER1_type 1 187 -2 704 179 13 7 chr10 83093600 83093751 -57223014 + L1MB3 LINE L1 6031 6182 -1 234 91 0 0 chr10 83093974 83094007 -57222758 + (T)n Simple_repeat Simple_repeat 1 33 0 377 327 13 6 chr10 83095090 83095249 -57221516 + (TATG)n Simple_repeat Simple_repeat 2 161 0 * 438 326 6 11 chr10 83095159 83095340 -57221425 + (TG)n Simple_repeat Simple_repeat 1 180 0 1955 111 4 0 chr10 83095925 83096187 -57220578 + AluSp SINE Alu 47 309 -4 21 36 0 0 chr10 83096298 83096326 -57220439 + AT_rich Low_complexity Low_complexity 1 28 0 542 233 91 45 chr10 83096400 83096714 -57220051 + MLT1G1 LTR MaLR 264 554 -1 2357 108 42 31 chr10 83098056 83098416 -57218349 + THE1B LTR MaLR 1 364 0 234 227 92 59 chr10 83099102 83099221 -57217544 - MER46C DNA MER2_type -37 301 179 324 0 0 0 chr10 83100980 83101016 -57215749 + (CA)n Simple_repeat Simple_repeat 1 36 0 2284 84 17 17 chr10 83101573 83101872 -57214893 - AluY SINE Alu -12 299 1 21 0 0 0 chr10 83102389 83102410 -57214355 + AT_rich Low_complexity Low_complexity 1 21 0 1857 135 14 0 chr10 83103870 83104166 -57212599 + AluJb SINE Alu 11 310 -2 986 68 0 0 chr10 83104784 83104902 -57211863 + AluSq/x SINE Alu 1 118 -195 214 171 0 0 chr10 83105635 83105670 -57211095 + (CAT)n Simple_repeat Simple_repeat 2 36 0 3215 196 30 46 chr10 83106754 83107579 -57209186 - L1MC3 LINE L1 0 7785 6974 2318 79 0 35 chr10 83107640 83107956 -57208809 + AluSc SINE Alu 1 305 -4 38 75 0 0 chr10 83107983 83108063 -57208702 + AT_rich Low_complexity Low_complexity 1 80 0 2261 56 0 4 chr10 83108273 83108542 -57208223 - AluY SINE Alu -16 295 28 2281 86 0 0 chr10 83108944 83109222 -57207543 - AluY SINE Alu -33 278 1 5201 182 17 30 chr10 83109225 83110341 -57206424 - L1P LINE L1 -2208 3938 2838 859 139 6 36 chr10 83110450 83110615 -57206150 - L1P LINE L1 -3603 2543 2384 1438 209 58 26 chr10 83110750 83111094 -57205671 - MER57B LTR ERV1 0 434 80 27 29 0 0 chr10 83112661 83112695 -57204070 + AT_rich Low_complexity Low_complexity 1 34 0 459 63 0 0 chr10 83113190 83113253 -57203512 + (TA)n Simple_repeat Simple_repeat 2 64 0 210 37 0 0 chr10 83113252 83113279 -57203486 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 2054 248 48 15 chr10 83114708 83115297 -57201468 + MLT1E2 LTR MaLR 14 621 -5 1145 151 92 4 chr10 83115297 83115548 -57201217 + L1MA9 LINE L1 6040 6312 0 261 0 0 0 chr10 83115659 83115688 -57201077 + (CA)n Simple_repeat Simple_repeat 2 30 0 371 299 131 18 chr10 83116127 83116348 -57200417 - MIR SINE MIR -15 247 2 895 325 83 32 chr10 83116552 83117430 -57199335 - L2 LINE L2 0 3313 2376 549 216 40 0 chr10 83117530 83117655 -57199110 - L1ME3A LINE L1 -45 6125 5996 519 230 86 14 chr10 83117662 83117801 -57198964 + L1ME3A LINE L1 5883 6031 -139 302 207 85 0 chr10 83117788 83117870 -57198895 - L1ME3A LINE L1 -190 5974 5886 * 667 279 143 55 chr10 83117878 83119098 -57197667 - L1M4 LINE L1 -1821 4325 2999 954 35 0 0 chr10 83119245 83119359 -57197406 - L1PA3 LINE L1 0 6155 6042 251 104 21 0 chr10 83119506 83119554 -57197211 + (TA)n Simple_repeat Simple_repeat 1 49 0 557 244 150 10 chr10 83120179 83120372 -57196393 - MIR SINE MIR -26 236 17 598 241 70 40 chr10 83123869 83124097 -57192668 - L2 LINE L2 -1119 2195 1961 669 185 92 0 chr10 83124097 83124216 -57192549 + AluJb SINE Alu 169 298 -14 382 310 126 14 chr10 83124216 83124375 -57192390 - L2 LINE L2 -1347 1967 1827 2208 54 0 0 chr10 83124375 83124635 -57192130 + AluY SINE Alu 38 297 -14 382 310 126 14 chr10 83124635 83124667 -57192098 - L2 LINE L2 -1487 1827 1800 2218 70 0 76 chr10 83124667 83124982 -57191783 + AluSg1 SINE Alu 1 291 -18 382 310 126 14 chr10 83124982 83125147 -57191618 - L2 LINE L2 -1514 1800 1570 308 290 24 32 chr10 83126424 83126548 -57190217 - L2 LINE L2 -1 3312 3190 2527 60 0 3 chr10 83127349 83127649 -57189116 - AluY SINE Alu -12 299 1 1249 144 17 87 chr10 83128501 83128799 -57187966 - L1MA4 LINE L1 -1 6299 6023 2073 130 0 3 chr10 83130298 83130603 -57186162 - AluSx SINE Alu 0 304 1 1008 257 77 72 chr10 83132301 83132831 -57183934 - MLT1F1 LTR MaLR 0 567 5 1393 251 179 24 chr10 83133745 83134414 -57182351 - L2 LINE L2 -1933 1381 609 1569 128 53 53 chr10 83134892 83135073 -57181692 - AluJo SINE Alu -8 304 121 198 0 0 0 chr10 83135073 83135095 -57181670 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1569 128 53 53 chr10 83135095 83135217 -57181548 - AluJo SINE Alu -190 122 1 203 326 56 22 chr10 83136082 83136171 -57180594 - MIR SINE MIR -93 115 24 26 0 0 0 chr10 83136744 83136770 -57179995 + AT_rich Low_complexity Low_complexity 1 26 0 549 216 150 12 chr10 83136821 83136988 -57179777 - MER3 DNA MER1_type 0 209 20 424 271 144 47 chr10 83137796 83138032 -57178733 - MIR SINE MIR -2 260 2 21 0 0 0 chr10 83138052 83138073 -57178692 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr10 83139061 83139088 -57177677 + (T)n Simple_repeat Simple_repeat 1 27 0 1636 100 0 9 chr10 83139160 83139380 -57177385 - AluY SINE Alu -11 300 83 24 32 0 0 chr10 83140185 83140216 -57176549 + AT_rich Low_complexity Low_complexity 1 31 0 414 0 0 0 chr10 83140378 83140424 -57176341 + (TA)n Simple_repeat Simple_repeat 1 46 0 324 130 14 29 chr10 83140533 83140602 -57176163 + L1P LINE L1 2325 2392 -3754 22 0 0 0 chr10 83140719 83140741 -57176024 + AT_rich Low_complexity Low_complexity 1 22 0 331 295 9 0 chr10 83141028 83141140 -57175625 + MIR SINE MIR 149 261 -1 377 346 19 19 chr10 83141293 83141455 -57175310 - MLT1K LTR MaLR -235 353 192 266 298 183 39 chr10 83141831 83142039 -57174726 + LTR50 LTR ERVL 53 290 -505 390 258 36 122 chr10 83142068 83142289 -57174476 + LTR50 LTR ERVL 463 664 -131 241 298 107 0 chr10 83142615 83142746 -57174019 + MIR SINE MIR 56 200 -62 223 178 0 0 chr10 83142832 83142877 -57173888 + A-rich Low_complexity Low_complexity 1 45 0 378 303 58 13 chr10 83143073 83143228 -57173537 - MER63 DNA MER1_type -273 789 2 702 296 71 26 chr10 83143518 83143829 -57172936 - MER58B DNA MER1_type -15 326 2 231 133 0 67 chr10 83143934 83143979 -57172786 - MLT2B1 LTR ERVL -13 541 500 259 259 28 19 chr10 83143988 83144096 -57172669 + (CAGAGA)n Simple_repeat Simple_repeat 4 112 0 1993 199 134 12 chr10 83144104 83144536 -57172229 - MLT2B1 LTR ERVL -35 485 1 239 164 36 0 chr10 83144600 83144655 -57172110 + CT-rich Low_complexity Low_complexity 2 58 0 24 32 0 0 chr10 83144858 83144889 -57171876 + AT_rich Low_complexity Low_complexity 1 31 0 212 342 181 11 chr10 83145167 83145427 -57171338 + L3 LINE CR1 447 750 -827 1024 247 9 0 chr10 83145621 83145840 -57170925 + MER58A DNA MER1_type 1 221 -3 240 345 47 37 chr10 83145987 83146178 -57170587 + L3 LINE CR1 1252 1444 -133 21 0 0 0 chr10 83146399 83146420 -57170345 + AT_rich Low_complexity Low_complexity 1 21 0 230 0 33 0 chr10 83146440 83146470 -57170295 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2247 97 0 0 chr10 83146472 83146751 -57170014 - AluSx SINE Alu -33 279 1 328 272 104 0 chr10 83147870 83147995 -57168770 - MIR SINE MIR -73 189 52 187 361 67 0 chr10 83148597 83148716 -57168049 + L2 LINE L2 3140 3266 -6 367 287 32 38 chr10 83150522 83150766 -57165999 - MIR SINE MIR -19 243 4 180 231 26 0 chr10 83151748 83151787 -57164978 - MIR3 SINE MIR -54 154 115 644 204 0 6 chr10 83154169 83154326 -57162439 + CT-rich Low_complexity Low_complexity 4 159 0 187 293 114 32 chr10 83154774 83154897 -57161868 + MIR3 SINE MIR 8 140 -68 873 146 0 8 chr10 83155010 83155140 -57161625 - AluJb SINE Alu -183 129 1 212 343 154 14 chr10 83156120 83156263 -57160502 + MER5A DNA MER1_type 27 189 0 1823 169 10 3 chr10 83157149 83157457 -57159308 + AluSx SINE Alu 1 310 -2 873 271 13 13 chr10 83157467 83157703 -57159062 + MIR SINE MIR 20 255 -7 242 56 28 0 chr10 83157799 83157835 -57158930 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1723 163 0 7 chr10 83160000 83160277 -57156488 - AluJo SINE Alu -33 279 5 375 244 95 95 chr10 83160280 83160522 -57156243 - L1M4 LINE L1 -2962 3184 2943 308 293 8 60 chr10 83160532 83160665 -57156100 - L1M LINE L1 -713 5408 5283 2052 120 0 7 chr10 83161864 83162180 -57154585 - AluSx SINE Alu 0 314 1 2449 72 0 0 chr10 83164301 83164594 -57152171 - AluY SINE Alu -18 293 1 324 258 37 56 chr10 83164735 83164891 -57151874 + MIR3 SINE MIR 19 172 -36 655 287 92 14 chr10 83165256 83165472 -57151293 - L2 LINE L2 -1025 2289 2091 1560 134 134 4 chr10 83165472 83165733 -57151032 + AluJb SINE Alu 1 295 -17 655 287 92 14 chr10 83165733 83165885 -57150880 - L2 LINE L2 -1223 2091 1892 377 255 60 34 chr10 83166687 83166836 -57149929 - MIR SINE MIR -90 172 20 291 185 0 0 chr10 83167303 83167357 -57149408 + MIR SINE MIR 94 147 -61 292 239 0 0 chr10 83167374 83167441 -57149324 + MIR SINE MIR 81 147 -61 343 263 38 0 chr10 83168780 83168913 -57147852 + (CCCCAG)n Simple_repeat Simple_repeat 3 140 0 181 133 0 0 chr10 83171319 83171349 -57145416 - MIR SINE MIR -108 154 125 776 280 179 12 chr10 83172464 83172889 -57143876 - L2 LINE L2 0 3313 2818 270 275 77 11 chr10 83174136 83174227 -57142538 + MIR SINE MIR 99 195 -67 27 0 0 0 chr10 83174373 83174400 -57142365 + AT_rich Low_complexity Low_complexity 1 27 0 2252 99 3 3 chr10 83175695 83175989 -57140776 + AluSx SINE Alu 3 296 -16 206 327 28 56 chr10 83177614 83177721 -57139044 - MIR SINE MIR -79 183 80 1583 178 52 17 chr10 83178142 83178429 -57138336 - AluJo SINE Alu -14 298 2 5475 223 32 25 chr10 83178430 83180076 -57136689 - L1PA15-16 LINE L1 -3955 2248 669 417 348 20 10 chr10 83180148 83180352 -57136413 - L1PA15-16 LINE L1 -5645 559 354 463 328 16 46 chr10 83180446 83180769 -57135996 - L1PA15-16 LINE L1 -5839 365 53 252 364 68 49 chr10 83180952 83181466 -57135299 - L1M2 LINE L1 -6314 535 12 3173 251 11 39 chr10 83181501 83182571 -57134194 - L1M2 LINE L1 -4172 2677 1638 1965 114 200 12 chr10 83183071 83183485 -57133280 + LTR14B LTR ERVK 1 608 0 393 325 8 0 chr10 83183497 83183620 -57133145 - L1M2 LINE L1 -5827 942 819 210 37 0 0 chr10 83183739 83183766 -57132999 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 45425 36 3 1 chr10 83184455 83190600 -57126165 + L1PA4 LINE L1 2 6155 0 236 250 49 49 chr10 83190592 83190736 -57126029 - L1ME4a LINE L1 -78 6043 5900 * 301 389 43 9 chr10 83191053 83191264 -57125501 - L1MC4a LINE L1 -1926 5882 5665 209 170 43 0 chr10 83191264 83191311 -57125454 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 1705 164 13 33 chr10 83191350 83191654 -57125111 + AluJo SINE Alu 1 298 -14 646 288 85 34 chr10 83191654 83192008 -57124757 - L1MC4a LINE L1 -2170 5638 5267 1198 121 0 6 chr10 83192019 83192192 -57124573 - L1PA16 LINE L1 -226 5940 5769 7288 132 7 5 chr10 83192197 83193428 -57123337 + HERVH LTR ERV1 3804 5020 -2287 2704 75 40 12 chr10 83193432 83193834 -57122931 + HERVH LTR ERV1 7283 7695 -18 217 132 0 0 chr10 83193834 83193872 -57122893 + (T)n Simple_repeat Simple_repeat 1 38 0 8144 13 0 0 chr10 83193876 83195169 -57121596 - L1HS LINE L1 -2 6153 4861 7034 20 0 0 chr10 83195168 83195965 -57120800 + L1HS LINE L1 4064 4860 -1286 * 1759 90 112 11 chr10 83195995 83196325 -57120440 + LTR7 LTR ERV1 1 412 -38 5276 128 63 22 chr10 83196335 83197348 -57119417 - L1PA16 LINE L1 -9 6157 5257 865 152 8 0 chr10 83197350 83197482 -57119283 + AluSq/x SINE Alu 1 133 -179 2101 129 0 0 chr10 83197487 83197782 -57118983 + AluSg SINE Alu 1 295 -15 295 152 0 0 chr10 83197782 83197828 -57118937 - L1 LINE L1 -881 5265 5220 * 10748 178 24 3 chr10 83197824 83200256 -57116509 - L1M2 LINE L1 -743 6105 2134 2174 99 0 3 chr10 83200511 83200795 -57115970 + AluSg SINE Alu 1 283 -27 309 26 0 0 chr10 83200795 83200833 -57115932 + (CA)n Simple_repeat Simple_repeat 2 39 0 567 315 30 7 chr10 83251830 83252128 -57064637 - L1PA12 LINE L1 -7276 305 1 542 338 30 43 chr10 83252522 83252918 -57063847 + L2 LINE L2 2210 2600 -714 2103 147 0 0 chr10 83253220 83253532 -57063233 - AluSx SINE Alu 0 312 1 2048 116 3 7 chr10 83253702 83253994 -57062771 + AluSx SINE Alu 20 310 -2 642 191 7 52 chr10 83254235 83254371 -57062394 + FLAM_C SINE Alu 12 141 -2 770 251 47 5 chr10 83254493 83254708 -57062057 + MER58A DNA MER1_type 1 224 0 660 243 29 85 chr10 83254751 83254814 -57061951 + L1ME3A LINE L1 5904 5969 -201 2259 105 0 13 chr10 83254814 83255118 -57061647 - AluSx SINE Alu -12 300 1 660 243 29 85 chr10 83255118 83255326 -57061439 + L1ME3A LINE L1 5969 6160 -10 581 288 53 67 chr10 83255332 83255877 -57060888 + L2 LINE L2 2785 3313 0 193 319 50 28 chr10 83255922 83256063 -57060702 - L2 LINE L2 -373 2941 2798 1930 152 10 0 chr10 83256064 83256373 -57060392 + AluSx SINE Alu 1 312 0 427 215 141 96 chr10 83256436 83256748 -57060017 + MER96B DNA MER1_type? 2 327 -90 2198 229 78 7 chr10 83256753 83257294 -57059471 + L1MCa LINE L1 20 598 -5828 * 3984 203 40 69 chr10 83257290 83257454 -57059311 + L1MB7 LINE L1 4140 4307 -1877 808 161 0 29 chr10 83257454 83257591 -57059174 + FLAM_C SINE Alu 1 133 0 3984 203 40 69 chr10 83257591 83258047 -57058718 + L1MB7 LINE L1 4307 4774 -1410 2379 86 3 10 chr10 83258047 83258360 -57058405 + AluY SINE Alu 1 311 0 3984 203 40 69 chr10 83258360 83258925 -57057840 + L1MB7 LINE L1 4774 5353 -831 2020 123 3 14 chr10 83258925 83259209 -57057556 + AluSx SINE Alu 1 281 -31 3984 203 40 69 chr10 83259209 83259349 -57057416 + L1MB7 LINE L1 5353 5495 -689 659 174 99 0 chr10 83259349 83259470 -57057295 + FLAM_C SINE Alu 1 133 0 3984 203 40 69 chr10 83259470 83259708 -57057057 + L1MB7 LINE L1 5495 5738 -446 2372 90 3 3 chr10 83259708 83260009 -57056756 + AluSq SINE Alu 1 301 -12 3984 203 40 69 chr10 83260009 83260174 -57056591 + L1MB7 LINE L1 5738 5814 -370 1117 57 14 0 chr10 83260174 83260315 -57056450 + L1PA7 LINE L1 6007 6149 -5 3984 203 40 69 chr10 83260315 83260435 -57056330 + L1MB7 LINE L1 5814 5936 -248 822 201 13 0 chr10 83260436 83260585 -57056180 + AluJo SINE Alu 1 151 -161 728 188 49 90 chr10 83260588 83260811 -57055954 + L1MB7 LINE L1 5971 6184 0 2417 99 0 0 chr10 83261384 83261686 -57055079 + AluSq SINE Alu 1 302 -11 2082 122 0 0 chr10 83261686 83261965 -57054800 + AluY SINE Alu 1 279 -32 261 0 0 0 chr10 83261965 83261994 -57054771 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1275 154 19 19 chr10 83262400 83262614 -57054151 + MER46A DNA MER2_type 22 235 -1 2397 100 0 0 chr10 83263045 83263344 -57053421 + AluSq SINE Alu 1 299 -14 22 35 0 0 chr10 83263530 83263559 -57053206 + AT_rich Low_complexity Low_complexity 1 29 0 3640 201 36 64 chr10 83263714 83263769 -57052996 + L1MB2 LINE L1 3968 4023 -2123 2089 133 3 7 chr10 83263769 83264069 -57052696 + AluSg SINE Alu 1 299 -11 3640 201 36 64 chr10 83264069 83264401 -57052364 + L1MB2 LINE L1 4023 4363 -1783 2255 115 3 7 chr10 83264401 83264706 -57052059 + AluSg SINE Alu 1 304 -6 2404 92 0 13 chr10 83264706 83265019 -57051746 + AluY SINE Alu 1 310 -1 3640 201 36 64 chr10 83265019 83265336 -57051429 + L1MB2 LINE L1 4362 4638 -1508 2089 118 7 23 chr10 83265336 83265641 -57051124 + AluSx SINE Alu 1 300 -12 3640 201 36 64 chr10 83265641 83265980 -57050785 + L1MB2 LINE L1 4638 4985 -1161 1457 165 115 0 chr10 83266041 83266302 -57050463 - AluSp SINE Alu -22 291 1 825 156 0 15 chr10 83266433 83266612 -57050153 + FLAM_C SINE Alu 1 133 0 3946 169 65 20 chr10 83266613 83266836 -57049929 + L1MB2 LINE L1 5049 5260 -911 1775 175 3 3 chr10 83266836 83267122 -57049643 + AluJb SINE Alu 3 288 -24 3946 169 65 20 chr10 83267122 83267844 -57048921 + L1MB2 LINE L1 5260 6013 -158 516 202 101 0 chr10 83267854 83267963 -57048802 + MLT1B LTR MaLR 2 121 -269 2289 105 7 3 chr10 83267971 83268276 -57048489 + AluSx SINE Alu 1 306 -6 398 170 60 0 chr10 83268285 83268385 -57048380 + L1MB2 LINE L1 6064 6169 -2 444 98 0 0 chr10 83269267 83269328 -57047437 - Alu SINE Alu -251 62 2 1310 152 102 53 chr10 83269330 83269369 -57047396 + LTR49 LTR ERV1 204 240 -355 1708 193 0 10 chr10 83269369 83269669 -57047096 + AluJb SINE Alu 2 298 -14 1310 152 102 53 chr10 83269669 83269931 -57046834 + LTR49 LTR ERV1 240 520 -75 1719 119 42 4 chr10 83269931 83270192 -57046573 + MER41B LTR ERV1 1 271 -364 206 81 27 0 chr10 83270200 83270237 -57046528 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1313 114 5 5 chr10 83270243 83270427 -57046338 - AluSg/x SINE Alu -20 292 109 1115 104 6 29 chr10 83270429 83270667 -57046098 + AluSq SINE Alu 145 378 0 248 114 0 0 chr10 83270671 83270706 -57046059 + MER4E LTR ERV1 745 779 0 703 58 0 0 chr10 83271019 83271105 -57045660 + LTR8A LTR ERV1 1 86 -641 957 173 0 0 chr10 83271122 83271272 -57045493 - AluJb SINE Alu -26 286 137 3638 116 74 24 chr10 83271272 83271894 -57044871 + LTR8A LTR ERV1 73 725 -2 1656 184 0 45 chr10 83272196 83272342 -57044423 + AluJo SINE Alu 1 127 -185 2180 110 7 0 chr10 83272342 83272632 -57044133 + AluSx SINE Alu 6 297 -15 1656 184 0 45 chr10 83272632 83272795 -57043970 + AluJo SINE Alu 127 296 -16 2270 108 0 0 chr10 83273480 83273775 -57042990 - AluSx SINE Alu -17 295 1 530 110 12 0 chr10 83273983 83274065 -57042700 - AluS SINE Alu -228 84 2 559 256 95 31 chr10 83274427 83274717 -57042048 + MLT2C1 LTR ERVL 17 393 -4 270 266 26 104 chr10 83274722 83274832 -57041933 + ERVL-C1 LTR ERVL 2 98 -5666 2096 107 14 3 chr10 83274832 83275123 -57041642 + AluSg SINE Alu 1 294 -16 270 266 26 104 chr10 83275123 83275166 -57041599 + ERVL-C1 LTR ERVL 98 143 -5621 1704 222 23 11 chr10 83275228 83275580 -57041185 + ERVL LTR ERVL 4267 4622 -1142 1631 117 144 0 chr10 83275580 83275837 -57040928 - AluSx SINE Alu -18 294 1 504 233 133 57 chr10 83275874 83276084 -57040681 + MLT2C1 LTR ERVL 172 397 0 2100 141 16 0 chr10 83276206 83276511 -57040254 + AluSg SINE Alu 1 310 0 2294 100 0 3 chr10 83276797 83277108 -57039657 + AluY SINE Alu 1 310 -1 587 371 22 25 chr10 83277267 83277714 -57039051 + L1PA13 LINE L1 1 446 -6341 2141 125 3 0 chr10 83278522 83278826 -57037939 + AluSp SINE Alu 1 305 -8 2887 170 11 30 chr10 83278827 83279398 -57037367 + L1PA16 LINE L1 5607 6166 0 410 192 26 0 chr10 83280785 83280863 -57035902 + AluJ/FLAM SINE Alu 1 80 -222 306 114 68 0 chr10 83280869 83280957 -57035808 + (TA)n Simple_repeat Simple_repeat 1 94 0 1144 71 0 0 chr10 83280958 83281098 -57035667 + AluSg/x SINE Alu 157 296 -14 561 38 6 126 chr10 83281099 83281258 -57035507 + (TA)n Simple_repeat Simple_repeat 1 140 0 2284 106 0 0 chr10 83281595 83281896 -57034869 + AluSx SINE Alu 1 301 -11 284 232 0 0 chr10 83281983 83282052 -57034713 + A-rich Low_complexity Low_complexity 1 69 0 1279 186 14 0 chr10 83282242 83282463 -57034302 + AluJo SINE Alu 5 228 -84 1254 173 101 75 chr10 83282531 83282889 -57033876 - MSTC LTR MaLR -61 367 1 1910 130 0 7 chr10 83283150 83283420 -57033345 - AluSx SINE Alu -10 302 35 1879 178 0 9 chr10 83283985 83284300 -57032465 - AluSx SINE Alu 0 312 1 471 297 67 6 chr10 83284347 83284512 -57032253 - MER101 LTR ERV1 -67 407 233 234 336 53 46 chr10 83284508 83284791 -57031974 - MER101B LTR ERV1 -280 290 6 * 657 158 65 43 chr10 83284991 83285130 -57031635 + LTR8 LTR ERV1 1 142 -549 449 140 54 32 chr10 83285130 83285244 -57031521 - AluSg/x SINE Alu 0 310 206 2109 116 3 19 chr10 83285741 83286051 -57030714 + AluSp SINE Alu 1 305 -8 2867 178 5 30 chr10 83286052 83286626 -57030139 + L1PA16 LINE L1 5607 6166 0 420 209 25 4 chr10 83287996 83288094 -57028671 + AluJ/FLAM SINE Alu 1 80 -222 742 94 47 0 chr10 83288097 83288267 -57028498 + (TA)n Simple_repeat Simple_repeat 2 179 0 919 146 0 0 chr10 83288275 83288412 -57028353 + AluSg/x SINE Alu 157 293 -17 180 184 0 0 chr10 83288499 83288548 -57028217 + A-rich Low_complexity Low_complexity 1 49 0 1294 181 14 0 chr10 83288759 83288980 -57027785 + AluJo SINE Alu 5 228 -84 1220 176 100 78 chr10 83289047 83289406 -57027359 - MSTC LTR MaLR -61 367 1 2022 152 0 0 chr10 83289672 83289974 -57026791 - AluSx SINE Alu -10 302 1 467 122 24 12 chr10 83290178 83290260 -57026505 - AluS SINE Alu -228 84 2 483 313 0 0 chr10 83290622 83290772 -57025993 + MLT2C2 LTR ERVL 17 166 -298 398 201 194 58 chr10 83290777 83290916 -57025849 + MLT2C1 LTR ERVL 240 397 0 2066 123 10 3 chr10 83291027 83291329 -57025436 + AluSg SINE Alu 1 304 -6 1699 230 23 0 chr10 83291434 83291782 -57024983 + ERVL LTR ERVL 4267 4622 -1142 2070 128 14 0 chr10 83291782 83292079 -57024686 - AluSx SINE Alu -11 301 1 430 225 143 62 chr10 83292116 83292325 -57024440 + MLT2C1 LTR ERVL 172 397 0 1903 161 16 0 chr10 83292447 83292752 -57024013 + AluSx SINE Alu 1 310 -2 569 371 25 27 chr10 83293137 83293584 -57023181 + L1PA13 LINE L1 1 446 -6341 1931 158 3 0 chr10 83294394 83294704 -57022061 + AluSp SINE Alu 3 313 0 2938 171 5 30 chr10 83294705 83295279 -57021486 + L1PA16 LINE L1 5607 6166 0 365 218 26 0 chr10 83296662 83296740 -57020025 + AluJ/FLAM SINE Alu 1 80 -222 38 0 0 0 chr10 83296743 83296781 -57019984 + AT_rich Low_complexity Low_complexity 1 38 0 947 145 0 0 chr10 83296781 83296922 -57019843 + AluSg/x SINE Alu 159 302 -10 603 74 0 0 chr10 83296922 83297003 -57019762 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 2207 125 0 0 chr10 83297349 83297653 -57019112 + AluSx SINE Alu 1 304 -8 240 273 0 0 chr10 83297740 83297817 -57018948 + A-rich Low_complexity Low_complexity 1 77 0 1389 176 9 0 chr10 83298007 83298229 -57018536 + AluJo SINE Alu 5 228 -84 1035 199 101 76 chr10 83298290 83298646 -57018119 - MSTC LTR MaLR -61 367 3 1959 122 0 7 chr10 83298912 83299190 -57017575 - AluSx SINE Alu -2 310 35 1889 174 0 0 chr10 83299749 83300048 -57016717 - AluSx SINE Alu -13 299 1 506 330 5 5 chr10 83300078 83300269 -57016496 - MER101 LTR ERV1 -51 423 233 264 346 49 34 chr10 83300265 83300528 -57016237 - MER101B LTR ERV1 -280 290 24 * 658 146 66 44 chr10 83300738 83300875 -57015890 + LTR8 LTR ERV1 1 140 -551 2239 96 17 0 chr10 83300898 83301191 -57015574 - AluSg SINE Alu -12 298 1 223 255 0 0 chr10 83301966 83302013 -57014752 + GA-rich Low_complexity Low_complexity 3 49 0 1977 93 0 41 chr10 83302934 83303224 -57013541 - AluY SINE Alu -2 309 32 2048 136 3 13 chr10 83305070 83305371 -57011394 + AluSg SINE Alu 1 298 -12 2039 134 0 0 chr10 83305749 83306062 -57010703 + AluSx SINE Alu 1 313 0 1581 173 34 20 chr10 83306556 83306851 -57009914 + AluJb SINE Alu 3 301 -11 2241 113 3 0 chr10 83306963 83307263 -57009502 - AluSx SINE Alu -11 301 1 710 267 78 54 chr10 83307646 83308011 -57008754 + L2 LINE L2 2247 2625 -689 2250 118 0 0 chr10 83308011 83308307 -57008458 - AluSx SINE Alu -16 296 1 710 267 78 54 chr10 83308307 83308364 -57008401 + L2 LINE L2 2625 2679 -635 2017 129 20 0 chr10 83308429 83308724 -57008041 - AluSx SINE Alu -11 301 1 624 226 8 8 chr10 83309195 83309319 -57007446 + FLAM_A SINE Alu 1 124 -9 512 181 21 0 chr10 83309502 83309596 -57007169 + FRAM SINE Alu 75 170 -6 1070 151 0 24 chr10 83309601 83309767 -57006998 + AluJb SINE Alu 129 290 -22 1051 224 23 33 chr10 83309775 83310079 -57006686 + L1M3 LINE L1 4496 4796 -1350 1711 175 65 70 chr10 83310114 83310305 -57006460 + L1M3 LINE L1 4765 4956 -1227 2352 80 3 3 chr10 83310305 83310606 -57006159 + AluY SINE Alu 1 301 -10 1711 175 65 70 chr10 83310606 83310906 -57005859 + L1M3 LINE L1 4956 5256 -927 2388 104 3 0 chr10 83310906 83311214 -57005551 + AluSx SINE Alu 1 309 -3 1711 175 65 70 chr10 83311214 83311360 -57005405 + L1M3 LINE L1 5256 5725 -458 210 246 46 0 chr10 83311507 83311572 -57005193 + MIR SINE MIR 10 77 -185 407 268 103 10 chr10 83312138 83312332 -57004433 - L1MC5 LINE L1 -55 7906 7695 1755 148 20 14 chr10 83312477 83312774 -57003991 + AluJo SINE Alu 1 299 -13 250 297 44 0 chr10 83313102 83313193 -57003572 - MIR SINE MIR -65 197 103 214 269 90 0 chr10 83313436 83313514 -57003251 - MIR SINE MIR -60 202 118 280 278 139 33 chr10 83313707 83313858 -57002907 - MIR SINE MIR -13 249 83 180 0 0 0 chr10 83314003 83314023 -57002742 + (CAA)n Simple_repeat Simple_repeat 1 20 0 1887 124 7 7 chr10 83314303 83314594 -57002171 - AluSx SINE Alu -17 295 5 1844 92 12 12 chr10 83314898 83315149 -57001616 - AluSx SINE Alu -46 266 16 2394 80 6 13 chr10 83315165 83315478 -57001287 - AluY SINE Alu 0 311 1 2463 46 0 0 chr10 83315677 83315984 -57000781 + AluY SINE Alu 1 307 0 2016 134 7 10 chr10 83316087 83316377 -57000388 + AluSx SINE Alu 1 289 -23 35 0 0 0 chr10 83316377 83316412 -57000353 + AT_rich Low_complexity Low_complexity 1 35 0 1847 159 7 3 chr10 83317202 83317492 -56999273 + AluSx SINE Alu 1 291 -21 272 27 27 0 chr10 83317537 83317574 -56999191 + (TA)n Simple_repeat Simple_repeat 2 39 0 1964 162 42 85 chr10 83317909 83318095 -56998670 - MER4D LTR ERV1 -5 898 706 2091 143 3 0 chr10 83318095 83318403 -56998362 + AluSx SINE Alu 1 309 -3 1964 162 42 85 chr10 83318403 83318857 -56997908 - MER4D LTR ERV1 -197 706 1 11096 114 39 25 chr10 83318857 83319019 -56997746 - MER4D-int LTR ERV1 0 6758 6600 2335 104 3 0 chr10 83319019 83319318 -56997447 + AluSp SINE Alu 1 300 -13 11096 114 39 25 chr10 83319318 83319705 -56997060 - MER4D-int LTR ERV1 -158 6600 6220 1420 124 177 12 chr10 83319705 83319954 -56996811 + AluSc SINE Alu 1 290 -9 11096 114 39 25 chr10 83319954 83320709 -56996056 - MER4D-int LTR ERV1 -538 6220 5477 2317 99 3 13 chr10 83320709 83321012 -56995753 + AluSg SINE Alu 1 300 -10 11096 114 39 25 chr10 83321012 83321177 -56995588 - MER4D-int LTR ERV1 -1281 5477 5316 1646 148 50 37 chr10 83321177 83321303 -56995462 + AluJb SINE Alu 1 124 -188 2053 124 3 3 chr10 83321303 83321593 -56995172 + AluSq SINE Alu 6 295 -18 1646 148 50 37 chr10 83321593 83321764 -56995001 + AluJb SINE Alu 124 302 -10 11096 114 39 25 chr10 83321764 83322072 -56994693 - MER4D-int LTR ERV1 -1442 5316 4953 1193 124 110 53 chr10 83322073 83322130 -56994635 + AluSx SINE Alu 56 108 -204 1588 126 130 11 chr10 83322130 83322391 -56994374 + AluSg1 SINE Alu 1 292 -17 1193 124 110 53 chr10 83322391 83322542 -56994223 + AluSx SINE Alu 108 276 -36 243 0 0 0 chr10 83322548 83322575 -56994190 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1706 114 0 0 chr10 83322577 83322804 -56993961 - MER4D-int LTR ERV1 -1792 4966 4740 1647 70 107 37 chr10 83322803 83323101 -56993664 - MER4B-int LTR ERV1 -4115 2643 2325 * 218 125 21 0 chr10 83323132 83323180 -56993585 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 419 98 0 0 chr10 83323183 83323260 -56993505 + MER4B-int LTR ERV1 1550 2468 -4130 4532 124 76 7 chr10 83323273 83323984 -56992781 + MER4E LTR ERV1 20 779 0 4933 91 29 59 chr10 83323984 83324372 -56992393 - MER4B-int LTR ERV1 -4439 2319 1921 2272 114 0 10 chr10 83324372 83324680 -56992085 - AluSg1 SINE Alu -1 308 4 4933 91 29 59 chr10 83324680 83325203 -56991562 - MER4B-int LTR ERV1 -4837 1921 1436 1936 204 83 24 chr10 83324727 83325266 -56991499 - LTR57-int LTR ERVL -3763 1580 1010 * 1037 226 106 127 chr10 83325267 83326084 -56990681 + LTR1B LTR ERV1 28 826 0 2252 109 57 14 chr10 83326084 83326505 -56990260 - MER4B-int LTR ERV1 -4412 2186 1748 180 111 0 0 chr10 83326514 83326541 -56990224 + (CA)n Simple_repeat Simple_repeat 2 28 0 4361 125 98 30 chr10 83326541 83326640 -56990125 - MER4B-int LTR ERV1 -5614 1144 1053 2148 125 3 0 chr10 83326640 83326935 -56989830 + AluSx SINE Alu 1 296 -16 4361 125 98 30 chr10 83326935 83327605 -56989160 - MER4B-int LTR ERV1 -5705 1053 328 2423 87 3 0 chr10 83327660 83327970 -56988795 - AluY SINE Alu 0 311 1 1948 177 0 0 chr10 83328036 83328347 -56988418 - AluSx SINE Alu -1 311 1 1538 158 109 48 chr10 83328347 83328677 -56988088 - MER4B LTR ERV1 -260 350 1 2348 81 0 0 chr10 83328734 83329048 -56987717 - AluSc SINE Alu 0 314 1 1187 124 42 48 chr10 83329245 83329361 -56987404 + AluJo SINE Alu 4 77 -235 381 22 0 0 chr10 83329361 83329407 -56987358 + (TAA)n Simple_repeat Simple_repeat 1 46 0 1187 124 42 48 chr10 83329407 83329551 -56987214 + AluJo SINE Alu 77 220 -92 258 281 30 72 chr10 83329962 83330197 -56986568 - L1M4 LINE L1 -1198 4948 4724 356 307 115 25 chr10 83330333 83330577 -56986188 - L1M4 LINE L1 -891 5255 4990 699 152 0 18 chr10 83330879 83330991 -56985774 + FLAM_C SINE Alu 23 132 -11 2082 145 0 3 chr10 83331238 83331535 -56985230 + AluSx SINE Alu 1 296 -16 2258 91 40 0 chr10 83331836 83332133 -56984632 + AluSq SINE Alu 1 309 -4 504 252 84 0 chr10 83332663 83332818 -56983947 + MIR SINE MIR 90 257 -5 1926 127 24 3 chr10 83332830 83333121 -56983644 - AluSg SINE Alu -13 297 1 722 262 40 20 chr10 83333296 83333548 -56983217 - MIR SINE MIR -1 261 5 1842 126 7 4 chr10 83333643 83333914 -56982851 - AluSx SINE Alu -14 298 27 207 0 0 0 chr10 83333926 83333949 -56982816 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 690 171 0 0 chr10 83333949 83334060 -56982705 - FLAM_C SINE Alu -27 116 6 1265 122 117 5 chr10 83335344 83335557 -56981208 - AluSx SINE Alu -16 296 60 1765 145 6 43 chr10 83336284 83336425 -56980340 + AluJb SINE Alu 1 146 -166 2078 125 0 0 chr10 83336425 83336731 -56980034 + AluSx SINE Alu 1 306 0 1765 145 6 43 chr10 83336731 83336911 -56979854 + AluJb SINE Alu 146 312 0 1708 166 23 20 chr10 83337014 83337316 -56979449 + AluJo SINE Alu 3 305 -7 229 266 16 0 chr10 83337951 83338015 -56978750 + L2 LINE L2 3204 3268 -4 382 306 12 23 chr10 83338177 83338350 -56978415 - MER5B DNA MER1_type -3 175 5 2123 120 10 7 chr10 83338733 83339033 -56977732 - AluSx SINE Alu -11 301 1 2056 140 0 34 chr10 83339422 83339744 -56977021 + AluSx SINE Alu 1 311 -1 2359 92 13 0 chr10 83340442 83340747 -56976018 - AluSc SINE Alu 0 309 1 2192 119 0 22 chr10 83340909 83341221 -56975544 + AluSx SINE Alu 5 309 -3 2364 78 3 3 chr10 83342188 83342484 -56974281 + AluSg SINE Alu 1 296 -14 723 177 23 0 chr10 83342596 83342726 -56974039 - FLAM_A SINE Alu 0 133 1 729 253 33 65 chr10 83342775 83342988 -56973777 - L1ME LINE L1 -305 5816 5616 2104 116 0 33 chr10 83342988 83343289 -56973476 + AluSx SINE Alu 1 291 -21 729 253 33 65 chr10 83343289 83343411 -56973354 - L1ME LINE L1 -505 5616 5492 469 245 141 98 chr10 83343600 83344266 -56972499 - L1ME LINE L1 -1085 5061 4367 1006 55 0 24 chr10 83344284 83344411 -56972354 + AluY SINE Alu 174 297 -14 730 159 0 0 chr10 83344411 83344524 -56972241 - AluJo/FLAM SINE Alu -198 114 2 477 148 0 0 chr10 83344528 83344616 -56972149 - AluS SINE Alu -1 310 223 1133 213 81 103 chr10 83344620 83345026 -56971739 - L1ME LINE L1 -1776 4370 3957 1698 158 0 25 chr10 83345026 83345305 -56971460 + AluJo SINE Alu 11 282 -30 1133 213 81 103 chr10 83345305 83345349 -56971416 - L1ME LINE L1 -2189 3957 3914 2552 59 0 7 chr10 83345349 83345653 -56971112 + AluY SINE Alu 1 302 -9 1133 213 81 103 chr10 83345653 83345750 -56971015 - L1ME LINE L1 -2232 3914 3831 506 315 60 5 chr10 83345908 83346124 -56970641 - MIR SINE MIR -28 234 7 24 0 0 0 chr10 83346331 83346355 -56970410 + AT_rich Low_complexity Low_complexity 1 24 0 190 226 81 32 chr10 83347320 83347382 -56969383 + L2 LINE L2 3206 3270 -2 1634 161 23 75 chr10 83348529 83348780 -56967985 - MER7A DNA MER2_type -2697 341 79 378 0 0 0 chr10 83348780 83348822 -56967943 + (TA)n Simple_repeat Simple_repeat 2 43 0 1897 115 0 26 chr10 83348822 83349091 -56967674 + AluSx SINE Alu 38 299 -13 1634 161 23 75 chr10 83349091 83349186 -56967579 - MER7A DNA MER2_type -2957 81 14 2447 66 0 0 chr10 83349187 83349473 -56967292 + AluY SINE Alu 1 286 -25 221 162 0 0 chr10 83349600 83349637 -56967128 - MIR SINE MIR -90 118 82 189 154 0 0 chr10 83349898 83349937 -56966828 + A-rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr10 83350949 83350971 -56965794 + AT_rich Low_complexity Low_complexity 1 22 0 2180 123 0 0 chr10 83350980 83351273 -56965492 - AluSx SINE Alu -19 293 1 13788 82 6 1 chr10 83351541 83353409 -56963356 - L1PA7 LINE L1 -1039 5107 3230 7260 53 8 0 chr10 83353409 83354440 -56962325 + L1PA7 LINE L1 5117 6154 0 2121 165 10 7 chr10 83354448 83354853 -56961912 + L1 LINE L1 4250 4655 -1491 1454 108 0 0 chr10 83354853 83355039 -56961726 + AluSx SINE Alu 34 219 -93 649 182 14 7 chr10 83355043 83355191 -56961574 + GA-rich Low_complexity Low_complexity 2 150 0 288 178 133 44 chr10 83355323 83355413 -56961352 - MER5A DNA MER1_type -83 106 9 1615 176 30 7 chr10 83355837 83356132 -56960633 + AluJb SINE Alu 1 302 -10 2499 48 0 7 chr10 83356195 83356488 -56960277 + AluY SINE Alu 1 291 -20 339 323 75 82 chr10 83357202 83357666 -56959099 + HAL1 LINE L1 977 1437 -1070 1670 172 3 21 chr10 83357689 83357824 -56958941 + AluJb SINE Alu 1 137 -175 2236 94 3 7 chr10 83357824 83358121 -56958644 + AluSc SINE Alu 1 296 -13 1670 172 3 21 chr10 83358121 83358276 -56958489 + AluJb SINE Alu 137 286 -26 255 306 90 0 chr10 83358295 83358406 -56958359 + HAL1 LINE L1 1424 1544 -963 180 0 0 0 chr10 83358470 83358490 -56958275 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2129 128 0 0 chr10 83358493 83358782 -56957983 - AluSx SINE Alu -23 289 1 2227 124 0 3 chr10 83359164 83359470 -56957295 - AluSx SINE Alu -7 305 1 377 314 21 43 chr10 83360623 83360759 -56956006 - MIR SINE MIR -8 254 121 1736 132 97 0 chr10 83360759 83361039 -56955726 + AluSx SINE Alu 1 305 0 377 314 21 43 chr10 83361039 83361089 -56955676 - MIR SINE MIR -141 121 71 198 0 0 0 chr10 83361090 83361112 -56955653 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 12336 70 4 1 chr10 83361249 83362781 -56953984 + HERVK14 LTR ERVK 17 1553 -4392 465 48 0 0 chr10 83362798 83362860 -56953905 + HERVK14 LTR ERVK 3317 3378 -2567 4678 84 16 43 chr10 83362860 83363588 -56953177 + HERVK14 LTR ERVK 4944 5572 -373 1313 178 0 5 chr10 83363590 83363621 -56953144 + MER41C-int LTR ERV1 7545 7756 0 1480 77 0 0 chr10 83363621 83363803 -56952962 + HERVK14 LTR ERVK 5578 5759 -186 377 168 0 18 chr10 83363803 83363878 -56952887 + MER41C LTR ERV1 1 61 -493 473 15 30 61 chr10 83363878 83363944 -56952821 + HERVK14 LTR ERVK 5835 5898 -47 843 285 36 36 chr10 83363968 83364298 -56952467 + HERVK14 LTR ERVK 6912 7241 -2 2064 72 5 176 chr10 83364303 83364718 -56952047 + LTR14A LTR ERVK 1 344 0 832 98 219 0 chr10 83364720 83364843 -56951922 - AluSg SINE Alu -160 150 1 241 279 196 76 chr10 83364977 83365050 -56951715 + MIR3 SINE MIR 21 84 -124 1912 146 3 10 chr10 83365050 83365345 -56951420 - AluSx SINE Alu -19 293 1 241 279 196 76 chr10 83365345 83365429 -56951336 + MIR3 SINE MIR 84 197 -11 390 278 0 19 chr10 83365465 83365573 -56951192 + L3 LINE CR1 1419 1524 -53 332 288 84 23 chr10 83365598 83365813 -56950952 - MIR SINE MIR 0 262 35 301 273 83 8 chr10 83366056 83366177 -56950588 - MIR SINE MIR -55 153 24 186 43 0 0 chr10 83366274 83366297 -56950468 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2296 85 7 0 chr10 83366301 83366584 -56950181 - AluSp SINE Alu -27 286 2 1971 134 6 35 chr10 83367054 83367232 -56949533 - AluSx SINE Alu -7 305 138 2595 53 3 0 chr10 83367232 83367534 -56949231 - AluY SINE Alu -8 303 1 1971 134 6 35 chr10 83367534 83367669 -56949096 - AluSx SINE Alu -174 138 1 456 130 0 0 chr10 83368355 83368432 -56948333 - AluSp/q SINE Alu 0 313 237 1424 152 104 60 chr10 83369112 83369447 -56947318 - MER4B LTR ERV1 -260 350 1 1162 189 0 5 chr10 83369887 83370072 -56946693 - AluJo SINE Alu -128 184 1 396 303 46 26 chr10 83370072 83370224 -56946541 - L1ME LINE L1 -502 5668 5514 3843 123 52 46 chr10 83370226 83370778 -56945987 + MER50 LTR ERV1 10 569 -165 1988 116 3 31 chr10 83370778 83371105 -56945660 - AluSx SINE Alu 0 319 1 3843 123 52 46 chr10 83371105 83371249 -56945516 + MER50 LTR ERV1 569 711 -23 623 210 51 60 chr10 83371348 83371631 -56945134 - LTR29 LTR ERV1 -89 529 221 2205 127 0 13 chr10 83371790 83372106 -56944659 + AluSx SINE Alu 1 312 0 2192 119 0 22 chr10 83372473 83372785 -56943980 + AluSx SINE Alu 5 309 -3 2186 95 10 3 chr10 83373752 83374046 -56942719 + AluSg SINE Alu 1 296 -14 722 262 40 20 chr10 83374141 83374393 -56942372 + MIR SINE MIR 5 261 -1 1926 127 24 3 chr10 83374568 83374859 -56941906 + AluSg SINE Alu 1 297 -13 504 252 84 0 chr10 83374871 83375026 -56941739 - MIR SINE MIR -5 257 90 2250 91 40 0 chr10 83375557 83375853 -56940912 - AluSq SINE Alu -5 308 1 2082 145 0 3 chr10 83376154 83376451 -56940314 - AluSx SINE Alu -16 296 1 699 152 0 18 chr10 83376698 83376810 -56939955 - FLAM_C SINE Alu -11 132 23 1960 100 45 4 chr10 83377778 83378070 -56938695 + AluSc SINE Alu 2 304 0 2205 111 3 0 chr10 83378152 83378449 -56938316 + AluSp SINE Alu 1 298 -15 2258 112 0 0 chr10 83378459 83378755 -56938010 + AluSq SINE Alu 1 296 -17 453 260 62 27 chr10 83378756 83378902 -56937863 + L1MC4a LINE L1 5477 5627 -2181 342 189 180 18 chr10 83378967 83379078 -56937687 + L1MC4a LINE L1 5786 5914 -1894 2115 133 0 0 chr10 83379305 83379598 -56937167 + AluSx SINE Alu 1 293 -19 802 149 0 8 chr10 83379807 83379941 -56936824 - FLAM_C SINE Alu 0 133 1 2250 93 3 7 chr10 83379958 83380248 -56936517 - AluSq SINE Alu -24 289 1 367 210 59 17 chr10 83380374 83380493 -56936272 - Charlie1 DNA MER1_type -29 2732 2609 2018 144 17 0 chr10 83380520 83380812 -56935953 - AluSx SINE Alu -15 297 1 264 244 24 49 chr10 83380859 83380941 -56935824 - Charlie1a DNA MER1_type -1325 130 51 2033 139 3 3 chr10 83380999 83381294 -56935471 - AluSx SINE Alu -17 295 1 1632 165 25 14 chr10 83381339 83381618 -56935147 + AluSx SINE Alu 1 282 -30 186 194 45 0 chr10 83381627 83381694 -56935071 + (TA)n Simple_repeat Simple_repeat 1 70 0 2561 52 0 7 chr10 83381750 83382056 -56934709 + AluY SINE Alu 1 304 -7 24 32 0 0 chr10 83382096 83382127 -56934638 + AT_rich Low_complexity Low_complexity 1 31 0 462 268 57 89 chr10 83382229 83382434 -56934331 + MER31-int LTR ERV1 2456 2666 -2270 2143 121 30 3 chr10 83382434 83382739 -56934026 - AluSq SINE Alu 0 313 1 462 268 57 89 chr10 83382739 83383025 -56933740 + MER31-int LTR ERV1 2666 2931 -2005 1071 217 57 13 chr10 83383061 83383360 -56933405 + LTR37A LTR ERV1 1 312 -114 1449 211 59 3 chr10 83383381 83383552 -56933213 - AluJb SINE Alu -7 305 110 357 24 0 0 chr10 83383552 83383594 -56933171 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1449 211 59 3 chr10 83383594 83383711 -56933054 - AluJb SINE Alu -202 110 1 186 43 0 0 chr10 83384029 83384052 -56932713 + (GA)n Simple_repeat Simple_repeat 2 24 0 2340 108 3 16 chr10 83384078 83384394 -56932371 + AluSx SINE Alu 1 312 0 631 248 196 0 chr10 83384599 83384918 -56931847 - L1ME3A LINE L1 -68 6097 5689 1823 155 52 0 chr10 83384919 83385311 -56931454 - AluJb SINE Alu 0 411 5 303 218 90 0 chr10 83385315 83385393 -56931372 - L1ME3A LINE L1 -469 5701 5617 * 951 217 24 4 chr10 83385383 83385620 -56931145 - L1MC4a LINE L1 -1198 6610 6402 * 4472 212 42 51 chr10 83385612 83386818 -56929947 + L1MC4a LINE L1 6614 7808 0 198 333 49 20 chr10 83386845 83386947 -56929818 + L2 LINE L2 2715 2819 -495 359 282 94 8 chr10 83387318 83387435 -56929330 - MIR SINE MIR -101 161 35 2078 124 6 6 chr10 83387912 83388252 -56928513 + L1PB1 LINE L1 5766 6106 -45 244 114 0 0 chr10 83388253 83388288 -56928477 + Alu SINE Alu 1 35 -264 2453 77 0 16 chr10 83388325 83388638 -56928127 - AluY SINE Alu -3 308 1 1190 86 16 21 chr10 83388654 83388841 -56927924 + L1MA3 LINE L1 6120 6305 0 2001 131 10 17 chr10 83388997 83389295 -56927470 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 83389297 83389337 -56927428 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 83389337 83389658 -56927107 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 83389799 83389940 -56926825 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 83389940 83390253 -56926512 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 83390253 83390577 -56926188 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 83391065 83391096 -56925669 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 83391097 83391392 -56925373 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 83392236 83392443 -56924322 + MIR SINE MIR 20 249 -13 2377 90 0 3 chr10 83392730 83393029 -56923736 - AluSx SINE Alu -14 298 1 35 0 0 0 chr10 83393052 83393087 -56923678 + AT_rich Low_complexity Low_complexity 1 35 0 1762 152 29 48 chr10 83393088 83393398 -56923367 - AluJo SINE Alu -8 304 1 839 117 0 17 chr10 83393493 83393613 -56923152 + FLAM_C SINE Alu 1 118 -25 33 43 0 0 chr10 83393613 83393660 -56923105 + AT_rich Low_complexity Low_complexity 1 47 0 368 296 45 38 chr10 83393906 83394142 -56922623 + L1MC4a LINE L1 4883 5116 -1005 2071 64 0 36 chr10 83394142 83394423 -56922342 + AluY SINE Alu 39 309 -2 368 296 45 38 chr10 83394423 83394735 -56922030 + L1MC4a LINE L1 5116 5510 -611 2297 68 12 52 chr10 83394781 83395105 -56921660 - AluY SINE Alu 0 311 1 446 312 22 22 chr10 83395301 83395532 -56921233 + L1MC4a LINE L1 5632 5862 -1946 2204 108 10 3 chr10 83395532 83395829 -56920936 - AluSx SINE Alu -13 299 1 194 264 69 28 chr10 83396302 83396374 -56920391 - MER5A DNA MER1_type -19 170 96 524 209 8 23 chr10 83396749 83396878 -56919887 + LTR37A LTR ERV1 296 422 -4 183 297 132 22 chr10 83397005 83397096 -56919669 + MIR SINE MIR 41 141 -67 323 324 11 6 chr10 83397592 83397768 -56918997 + GA-rich Low_complexity Low_complexity 1 177 0 244 307 21 29 chr10 83397814 83397954 -56918811 + GA-rich Low_complexity Low_complexity 2 140 0 1849 120 0 4 chr10 83398409 83398668 -56918097 + AluSg SINE Alu 50 307 -3 1642 203 45 73 chr10 83398752 83398951 -56917814 - L1MC5 LINE L1 -30 7931 7728 2329 129 0 0 chr10 83398951 83399261 -56917504 - AluSx SINE Alu -2 310 1 1642 203 45 73 chr10 83399261 83399678 -56917087 - L1MC5 LINE L1 -233 7728 7332 2259 78 0 11 chr10 83399700 83400019 -56916746 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 83400019 83400336 -56916429 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 83401159 83401354 -56915411 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 83401354 83401389 -56915376 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 83401389 83401510 -56915255 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 83401594 83401731 -56915034 - MIR3 SINE MIR -52 156 9 201 282 92 80 chr10 83402252 83402330 -56914435 - L3 LINE CR1 -339 1238 1162 2096 154 0 0 chr10 83402330 83402629 -56914136 + AluJb SINE Alu 1 299 -13 201 282 92 80 chr10 83402629 83402713 -56914052 - L3 LINE CR1 -415 1162 1074 579 228 15 95 chr10 83402819 83403082 -56913683 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 83403330 83403424 -56913341 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 83403649 83403949 -56912816 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 83403990 83404232 -56912533 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 83404401 83404433 -56912332 + MER63 DNA MER1_type 703 734 -328 887 101 7 50 chr10 83404437 83404576 -56912189 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 83404602 83404661 -56912104 + MER63 DNA MER1_type 968 1026 -35 226 297 139 67 chr10 83404801 83405246 -56911519 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 83405413 83405527 -56911238 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 83405637 83405793 -56910972 + MIR SINE MIR 65 262 0 2301 88 0 0 chr10 83406015 83406335 -56910430 + AluSx SINE Alu 1 320 0 1504 202 43 52 chr10 83407165 83407422 -56909343 + Charlie4a DNA MER1_type 49 307 -1654 1952 147 0 13 chr10 83407422 83407721 -56909044 - AluJb SINE Alu -17 295 1 1504 202 43 52 chr10 83407721 83407749 -56909016 + Charlie4a DNA MER1_type 307 334 -1627 1827 109 19 89 chr10 83407749 83408062 -56908703 - AluSx SINE Alu -21 291 1 1504 202 43 52 chr10 83408062 83408088 -56908677 + Charlie4a DNA MER1_type 334 359 -1602 2426 94 3 0 chr10 83408088 83408395 -56908370 - AluSx SINE Alu -4 308 1 1504 202 43 52 chr10 83408395 83408541 -56908224 + Charlie4a DNA MER1_type 359 504 -4 182 207 37 73 chr10 83408760 83408842 -56907923 - MIR3 SINE MIR -129 79 1 2881 185 20 43 chr10 83410068 83410121 -56906644 - L1MB5 LINE L1 -10 6662 6609 2320 113 7 3 chr10 83410121 83410431 -56906334 + AluJb SINE Alu 1 311 -1 2881 185 20 43 chr10 83410431 83410625 -56906140 - L1MB5 LINE L1 -63 6609 6412 2759 164 20 80 chr10 83410625 83411210 -56905555 + MER44D DNA MER2_type 1 605 0 2881 185 20 43 chr10 83411210 83411358 -56905407 - L1MB5 LINE L1 -260 6412 6262 2288 117 0 0 chr10 83411358 83411657 -56905108 - AluSg SINE Alu -11 299 1 2881 185 20 43 chr10 83411657 83411907 -56904858 - L1MB5 LINE L1 -410 6262 6030 1232 227 13 10 chr10 83411907 83412086 -56904679 - L1MB5 LINE L1 -2119 4525 4343 2457 88 0 13 chr10 83412086 83412391 -56904374 - AluSx SINE Alu -11 301 1 1232 227 13 10 chr10 83412391 83412510 -56904255 - L1MB5 LINE L1 -2301 4343 4226 * 7068 168 23 7 chr10 83412509 83413778 -56902987 + L1M1 LINE L1 813 2101 -5464 4659 228 120 28 chr10 83413778 83414581 -56902184 - L1MB5 LINE L1 -4784 1862 1135 1770 162 0 4 chr10 83414581 83414852 -56901913 - AluJb SINE Alu -42 270 1 4659 228 120 28 chr10 83414852 83415744 -56901021 - L1MB5 LINE L1 -5511 1135 7 446 264 108 14 chr10 83415766 83415914 -56900851 - MIR3 SINE MIR -46 162 1 398 264 83 8 chr10 83416533 83416654 -56900111 + MER5A DNA MER1_type 58 187 -2 192 276 23 58 chr10 83416580 83416667 -56900098 - MER5A DNA MER1_type -102 87 4 * 281 127 0 73 chr10 83416734 83416789 -56899976 - MER96B DNA MER1_type? -5 412 362 3097 149 51 35 chr10 83417218 83417822 -56898943 - LTR18B LTR ERVL 0 614 1 1179 252 65 16 chr10 83417849 83418171 -56898594 - MER102b DNA MER1_type -3 338 1 1575 189 27 10 chr10 83418631 83418803 -56897962 - AluJo SINE Alu -6 306 125 2312 94 3 7 chr10 83418803 83419101 -56897664 - AluSx SINE Alu -15 297 1 1575 189 27 10 chr10 83419101 83419229 -56897536 - AluJo SINE Alu -187 125 1 2074 109 39 3 chr10 83421220 83421503 -56895262 - AluSx SINE Alu -19 293 1 583 312 69 18 chr10 83421728 83421946 -56894819 - MIR SINE MIR -28 234 6 1662 180 80 50 chr10 83423917 83424294 -56892471 + MLT1B LTR MaLR 1 388 -2 446 310 65 0 chr10 83425000 83425155 -56891610 + MIR SINE MIR 1 165 -97 516 286 239 19 chr10 83425269 83426291 -56890474 + L2 LINE L2 2008 3313 0 207 245 20 0 chr10 83426352 83426401 -56890364 + MIR3 SINE MIR 151 200 -8 355 259 123 65 chr10 83427176 83427346 -56889419 + MIR3 SINE MIR 10 189 -19 243 230 35 92 chr10 83427813 83427900 -56888865 - MIR SINE MIR -102 160 79 271 306 90 9 chr10 83429073 83429184 -56887581 - MIR SINE MIR -115 147 28 1004 224 5 14 chr10 83429357 83429567 -56887198 + MIR SINE MIR 21 228 -34 194 161 0 0 chr10 83429689 83429720 -56887045 - MIR SINE MIR -165 97 67 372 94 0 0 chr10 83430730 83430783 -56885982 + (CA)n Simple_repeat Simple_repeat 1 53 0 310 273 187 7 chr10 83430995 83431134 -56885631 + MER5A DNA MER1_type 26 189 0 1951 163 0 22 chr10 83433217 83433536 -56883229 - AluJb SINE Alu 0 312 1 256 276 166 41 chr10 83434121 83434266 -56882499 - MIR SINE MIR -56 206 44 508 272 114 43 chr10 83434466 83434950 -56881815 + L2 LINE L2 2759 3282 -31 447 171 0 11 chr10 83435240 83435328 -56881437 - MIR3 SINE MIR -21 187 101 253 275 83 25 chr10 83436201 83436321 -56880444 + MIR SINE MIR 82 208 -54 193 303 91 30 chr10 83436610 83436709 -56880056 + MIR3 SINE MIR 61 165 -43 644 207 124 6 chr10 83438518 83438687 -56878078 - MER5A DNA MER1_type 0 189 1 1106 134 128 0 chr10 83438760 83438947 -56877818 - AluJo SINE Alu -18 294 84 2446 107 0 0 chr10 83438966 83439276 -56877489 - AluSx SINE Alu -2 310 1 1842 134 54 0 chr10 83439279 83439556 -56877209 - AluSx SINE Alu -20 292 1 2389 91 10 0 chr10 83440474 83440781 -56875984 + AluSx SINE Alu 1 310 -2 474 297 156 0 chr10 83440783 83441066 -56875699 + L1MC4 LINE L1 5588 5914 -1894 2086 100 0 31 chr10 83441681 83441971 -56874794 - AluSx SINE Alu -14 298 18 493 353 83 8 chr10 83442075 83442438 -56874327 - L3 LINE CR1 -701 876 487 216 0 0 0 chr10 83442910 83442934 -56873831 + (TC)n Simple_repeat Simple_repeat 2 25 0 767 200 7 0 chr10 83443325 83443470 -56873295 - MER5A DNA MER1_type -30 159 14 367 213 66 115 chr10 83443471 83443654 -56873111 - MER5A DNA MER1_type -14 175 2 1526 94 106 196 chr10 83443703 83444173 -56872592 + MSTA LTR MaLR 1 428 0 2452 167 55 7 chr10 83444231 83444667 -56872098 + LTR32 LTR ERVL 15 471 0 1414 203 135 0 chr10 83445457 83445806 -56870959 + MSTD LTR MaLR 1 396 0 1910 154 0 37 chr10 83445868 83446192 -56870573 + AluJb SINE Alu 1 312 0 712 147 42 5 chr10 83446197 83447009 -56869756 + L1MC1 LINE L1 5188 6333 0 303 250 60 80 chr10 83447156 83447233 -56869532 + L1MC4 LINE L1 6612 6688 -1354 1154 92 6 11 chr10 83447233 83447407 -56869358 - L1PA8 LINE L1 -9 6163 5991 303 250 60 80 chr10 83447407 83447429 -56869336 + L1MC4 LINE L1 6688 6709 -1333 553 200 123 32 chr10 83447538 83447693 -56869072 + MER21B LTR ERV1 638 806 -57 198 241 241 9 chr10 83448148 83448264 -56868501 - MIR3 SINE MIR 0 208 66 560 184 148 10 chr10 83448747 83448943 -56867822 - L1MC5 LINE L1 -57 7904 7682 389 150 0 0 chr10 83448945 83449005 -56867760 - Tigger5 DNA MER2_type 0 2323 2264 560 167 0 0 chr10 83449027 83449111 -56867654 + Tigger5 DNA MER2_type 5 88 -2235 326 182 0 0 chr10 83449175 83449230 -56867535 - Tigger5 DNA MER2_type -2268 55 1 185 250 194 0 chr10 83449550 83449622 -56867143 + L2 LINE L2 3187 3272 0 321 287 39 16 chr10 83450163 83450292 -56866473 - MER103 DNA DNA -28 138 7 853 209 124 13 chr10 83450292 83450526 -56866239 - MIR SINE MIR 0 262 3 635 266 13 7 chr10 83450708 83450862 -56865903 + MIR SINE MIR 2 156 -106 1934 170 34 17 chr10 83451853 83452211 -56864554 + MLT1A1 LTR MaLR 1 364 -1 243 0 0 0 chr10 83452245 83452272 -56864493 + (CA)n Simple_repeat Simple_repeat 1 27 0 455 302 30 44 chr10 83453019 83453246 -56863519 + MIR SINE MIR 30 252 -10 262 279 161 31 chr10 83453245 83453406 -56863359 + MIR SINE MIR 7 188 -74 * 1045 236 77 30 chr10 83453713 83454116 -56862649 + MLT1D LTR MaLR 19 440 -65 729 72 0 0 chr10 83454124 83454221 -56862544 + L1M3 LINE L1 5549 5645 -523 1086 174 5 62 chr10 83454222 83454446 -56862319 - MER46A DNA MER2_type 0 236 26 384 149 28 93 chr10 83454414 83454454 -56862311 + MLT1D LTR MaLR 403 444 -61 * 2732 171 13 4 chr10 83454454 83454981 -56861784 + L1MB3 LINE L1 5643 6174 -9 384 149 28 93 chr10 83454981 83455047 -56861718 + MLT1D LTR MaLR 444 502 -3 438 186 40 0 chr10 83455050 83455174 -56861591 + L1MA7 LINE L1 6162 6290 -1 1493 111 0 0 chr10 83455174 83455373 -56861392 - AluY SINE Alu -9 302 104 466 105 26 26 chr10 83457664 83457740 -56859025 - Alu SINE Alu -16 295 220 871 91 27 0 chr10 83457740 83457850 -56858915 - AluSg/x SINE Alu -124 188 76 498 125 0 0 chr10 83457953 83458025 -56858740 - MER69 DNA AcHobo -5 2521 2450 * 559 186 28 35 chr10 83458021 83458166 -56858599 - MER69 DNA AcHobo -1079 147 4 315 212 10 101 chr10 83458591 83458690 -56858075 + Charlie8 DNA MER1_type 140 229 -2188 2070 113 102 15 chr10 83459456 83459791 -56856974 - THE1B LTR MaLR 0 364 1 371 267 84 8 chr10 83459949 83460080 -56856685 - MIR SINE MIR -61 201 61 580 274 11 28 chr10 83460836 83461015 -56855750 - MIR3 SINE MIR -7 201 26 2514 60 0 7 chr10 83461449 83461748 -56855017 + AluY SINE Alu 1 297 -14 327 237 74 44 chr10 83462078 83462213 -56854552 + MLT1J LTR MaLR 6 144 -367 630 263 56 11 chr10 83462265 83462444 -56854321 + MER5A DNA MER1_type 1 187 -2 267 93 0 0 chr10 83462538 83462581 -56854184 + (GA)n Simple_repeat Simple_repeat 2 44 0 2512 66 0 3 chr10 83462904 83463205 -56853560 - AluY SINE Alu -11 300 1 1069 134 0 0 chr10 83463332 83463474 -56853291 + AluJb SINE Alu 1 142 -170 25 51 0 0 chr10 83463478 83463517 -56853248 + AT_rich Low_complexity Low_complexity 1 39 0 604 124 0 48 chr10 83464557 83464662 -56852103 + AluJ/FLAM SINE Alu 1 100 -212 204 40 0 0 chr10 83464664 83464689 -56852076 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 384 296 270 12 chr10 83465034 83465379 -56851386 + L2 LINE L2 1976 2409 -905 2411 100 3 0 chr10 83466572 83466873 -56849892 + AluSx SINE Alu 1 302 -10 353 214 56 0 chr10 83467868 83467957 -56848808 - MIR SINE MIR -57 205 112 252 0 0 0 chr10 83468226 83468254 -56848511 + (CAGGG)n Simple_repeat Simple_repeat 3 30 0 210 220 0 0 chr10 83469088 83469147 -56847618 + A-rich Low_complexity Low_complexity 1 59 0 932 175 94 7 chr10 83469469 83469756 -56847009 + L1MC3 LINE L1 7335 7729 -266 407 173 115 0 chr10 83469761 83469865 -56846900 + L1MC3 LINE L1 7669 7784 -1 815 145 0 22 chr10 83469921 83470059 -56846706 + FLAM_C SINE Alu 9 143 0 381 258 67 46 chr10 83470192 83470386 -56846379 - L1MC4a LINE L1 -1909 5899 5702 2444 79 7 0 chr10 83470394 83470699 -56846066 - AluSx SINE Alu -5 307 1 195 259 17 0 chr10 83471457 83471515 -56845250 - L2 LINE L2 -9 3263 3205 212 315 148 9 chr10 83471606 83471714 -56845051 + MIR SINE MIR 20 142 -66 21 0 0 0 chr10 83471867 83471888 -56844877 + AT_rich Low_complexity Low_complexity 1 21 0 252 158 0 0 chr10 83471893 83471931 -56844834 - Alu SINE Alu -265 38 1 289 272 17 61 chr10 83471934 83472052 -56844713 - L1M4 LINE L1 -3106 3040 2931 2173 124 0 0 chr10 83472052 83472350 -56844415 - AluSx SINE Alu -14 298 1 289 272 17 61 chr10 83472350 83472411 -56844354 - L1M4 LINE L1 -3215 2931 2869 22 0 0 0 chr10 83472441 83472463 -56844302 + AT_rich Low_complexity Low_complexity 1 22 0 750 131 16 0 chr10 83472474 83472596 -56844169 + FLAM_C SINE Alu 5 128 -5 478 317 72 59 chr10 83472667 83472963 -56843802 - L1M4 LINE L1 -3380 2766 2475 891 186 23 12 chr10 83472963 83473135 -56843630 - FAM SINE Alu -1 174 1 478 317 72 59 chr10 83473135 83473443 -56843322 - L1M4 LINE L1 -3671 2475 2110 184 328 69 17 chr10 83473800 83473916 -56842849 + L2 LINE L2 2268 2389 -925 601 206 113 21 chr10 83474028 83474169 -56842596 + MER69 DNA AcHobo 2 155 -1071 1732 183 0 0 chr10 83474172 83474472 -56842293 - MER7A DNA MER2_type 0 346 49 1947 267 143 8 chr10 83474653 83475305 -56841460 + MER69 DNA AcHobo 159 898 -1628 200 374 29 7 chr10 83475359 83475498 -56841267 + L2 LINE L2 2918 3059 -213 564 205 39 130 chr10 83476257 83476511 -56840254 - MIR SINE MIR 0 262 32 355 303 49 38 chr10 83476664 83476931 -56839834 + L1MEd LINE L1 919 1188 -4931 * 470 329 91 43 chr10 83476908 83477468 -56839297 + HAL1 LINE L1 -16 570 -1920 418 147 0 0 chr10 83477743 83477811 -56838954 + MER81 DNA DNA 2 69 -45 742 249 109 48 chr10 83477812 83478205 -56838560 + MSTB2 LTR MaLR 15 431 -26 1319 152 4 51 chr10 83478339 83478596 -56838169 + MSTB2 LTR MaLR 213 457 0 245 250 0 0 chr10 83478596 83478648 -56838117 + MER81 DNA DNA 63 114 0 659 96 19 0 chr10 83479634 83479738 -56837027 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 224 26 0 79 chr10 83480855 83480893 -56835872 + (TTAGGG)n Simple_repeat Simple_repeat 6 40 0 397 306 116 39 chr10 83481100 83481327 -56835438 + MIR SINE MIR 2 246 -16 399 347 12 12 chr10 83481327 83481494 -56835271 + MIR SINE MIR 3 169 -93 404 237 128 83 chr10 83481791 83482045 -56834720 - LTR41 LTR ERVL 0 795 510 742 197 48 21 chr10 83482303 83482491 -56834274 - LTR41 LTR ERVL -580 193 1 5130 85 28 0 chr10 83483003 83483675 -56833090 + LTR8 LTR ERV1 1 691 0 2184 118 0 0 chr10 83483876 83484189 -56832576 - AluSq SINE Alu 0 313 1 2012 104 29 29 chr10 83484189 83484220 -56832545 - AluSx SINE Alu -3 309 279 594 103 0 0 chr10 83484220 83484307 -56832458 + (TACTG)n Simple_repeat Simple_repeat 4 90 0 2012 104 29 29 chr10 83484307 83484583 -56832182 - AluSx SINE Alu -32 280 2 402 354 9 42 chr10 83484773 83484988 -56831777 + L2 LINE L2 36 243 -3071 * 509 258 118 38 chr10 83484974 83485160 -56831605 + L2 LINE L2 3112 3312 -1 432 256 199 26 chr10 83485310 83485501 -56831264 + MIR SINE MIR 28 251 -11 413 191 45 126 chr10 83485539 83485738 -56831027 + MER117 DNA MER1_type 12 194 -3 2170 100 0 3 chr10 83486219 83486520 -56830245 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 83486825 83486846 -56829919 + AT_rich Low_complexity Low_complexity 1 21 0 7881 24 0 0 chr10 83486846 83488526 -56828239 - L1PA3 LINE L1 0 6155 4476 190 259 0 52 chr10 83488571 83488629 -56828136 - L2 LINE L2 -18 3254 3200 265 243 243 37 chr10 83488651 83488787 -56827978 + MIR3 SINE MIR 12 175 -33 305 121 0 181 chr10 83489230 83489493 -56827272 - AluJ/FRAM SINE Alu 0 480 233 2183 119 3 0 chr10 83489718 83490029 -56826736 - AluSx SINE Alu 0 312 1 186 43 0 0 chr10 83490055 83490078 -56826687 + (TC)n Simple_repeat Simple_repeat 2 24 0 229 261 14 0 chr10 83490277 83490346 -56826419 + MER105 DNA DNA 11 80 -124 1309 211 59 3 chr10 83490396 83490513 -56826252 + AluJb SINE Alu 1 110 -202 357 24 0 0 chr10 83490513 83490555 -56826210 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1309 211 59 3 chr10 83490555 83490726 -56826039 + AluJb SINE Alu 110 305 -7 1139 217 57 13 chr10 83490747 83491046 -56825719 - LTR37A LTR ERV1 -114 312 1 514 268 57 89 chr10 83491082 83491368 -56825397 - MER31-int LTR ERV1 -2005 2931 2666 1989 121 30 3 chr10 83491368 83491673 -56825092 + AluSq SINE Alu 1 313 0 514 268 57 89 chr10 83491673 83491878 -56824887 - MER31-int LTR ERV1 -2270 2666 2456 24 32 0 0 chr10 83491980 83492011 -56824754 + AT_rich Low_complexity Low_complexity 1 31 0 1229 145 68 68 chr10 83492058 83492368 -56824397 - AluSx SINE Alu -1 311 2 21 0 0 0 chr10 83492463 83492484 -56824281 + AT_rich Low_complexity Low_complexity 1 21 0 415 180 262 66 chr10 83492489 83492672 -56824093 - HAL1 LINE L1 -36 2471 2253 1095 211 85 126 chr10 83492811 83493351 -56823414 - HAL1 LINE L1 -604 1903 1386 326 245 85 43 chr10 83493354 83493448 -56823317 - HAL1 LINE L1 -1487 1020 923 513 197 155 21 chr10 83493451 83493644 -56823121 - HAL1 LINE L1 -1511 996 778 212 289 79 18 chr10 83493934 83494048 -56822717 + MIR SINE MIR 33 153 -55 1010 148 85 0 chr10 83494513 83494689 -56822076 - AluSg/x SINE Alu 0 312 122 1794 108 4 0 chr10 83494691 83494942 -56821823 - AluSq SINE Alu -16 297 46 628 212 42 67 chr10 83495098 83495345 -56821420 - LTR29 LTR ERV1 -135 509 221 2101 123 0 13 chr10 83495504 83495820 -56820945 + AluSx SINE Alu 1 312 0 342 238 27 96 chr10 83495849 83495946 -56820819 - L1M4 LINE L1 -778 5368 5266 1664 176 3 3 chr10 83495946 83496235 -56820530 + AluJo SINE Alu 2 290 -22 342 238 27 96 chr10 83496235 83496372 -56820393 - L1M4 LINE L1 -880 5266 5151 1149 255 89 89 chr10 83496372 83496681 -56820084 + MLT1E1 LTR MaLR 1 309 -345 1823 134 0 21 chr10 83496681 83496997 -56819768 - AluSx SINE Alu 0 310 1 1149 255 89 89 chr10 83496997 83497340 -56819425 + MLT1E1 LTR MaLR 308 654 0 342 238 27 96 chr10 83497340 83497365 -56819400 - L1M4 LINE L1 -995 5151 5126 1959 119 3 29 chr10 83497409 83497719 -56819046 + AluSq SINE Alu 1 302 -11 2129 82 0 24 chr10 83498089 83498382 -56818383 + AluSc SINE Alu 1 286 -23 336 296 45 17 chr10 83499715 83499894 -56816871 + L1M4 LINE L1 2681 2864 -3282 446 271 48 66 chr10 83500485 83500758 -56816007 + MER113 DNA MER1_type? 94 361 -160 227 203 29 29 chr10 83501562 83501631 -56815134 + (CATCT)n Simple_repeat Simple_repeat 5 73 0 1367 217 3 7 chr10 83501806 83502096 -56814669 + AluJo SINE Alu 2 290 -22 1029 278 81 60 chr10 83502105 83502233 -56814532 - L1M4 LINE L1 -874 5272 5148 1203 252 89 89 chr10 83502233 83502542 -56814223 + MLT1E1 LTR MaLR 1 309 -345 1823 134 0 21 chr10 83502542 83502858 -56813907 - AluSx SINE Alu 0 310 1 1203 252 89 89 chr10 83502858 83503201 -56813564 + MLT1E1 LTR MaLR 308 654 0 1029 278 81 60 chr10 83503201 83503270 -56813495 - L1M4 LINE L1 -998 5148 5082 2122 119 0 0 chr10 83503270 83503565 -56813200 + AluSx SINE Alu 1 295 -17 1029 278 81 60 chr10 83503565 83503997 -56812768 - L1M4 LINE L1 -1064 5082 4660 1907 116 0 24 chr10 83503997 83504289 -56812476 + AluSx SINE Alu 14 298 -14 1029 278 81 60 chr10 83504289 83504387 -56812378 - L1M4 LINE L1 -1486 4660 4565 1969 126 3 0 chr10 83504387 83504681 -56812084 + L1PA13 LINE L1 5862 6156 -7 1029 278 81 60 chr10 83504681 83504733 -56812032 - L1M4 LINE L1 -1581 4565 4516 1923 145 3 3 chr10 83504733 83505043 -56811722 - AluSx SINE Alu -2 310 1 1029 278 81 60 chr10 83505043 83505239 -56811526 - L1M4 LINE L1 -1630 4516 4273 805 130 0 0 chr10 83505264 83505379 -56811386 - AluJb SINE Alu -196 116 2 363 262 192 5 chr10 83505428 83505642 -56811123 - L1M3de LINE L1 -2661 3879 3626 447 271 87 76 chr10 83505795 83506123 -56810642 - L1M3de LINE L1 -4613 1848 1525 2137 117 0 0 chr10 83506123 83506475 -56810290 - AluY SINE Alu 0 311 1 1708 122 6 100 chr10 83506477 83506806 -56809959 - AluSx SINE Alu -14 298 1 447 271 87 76 chr10 83506806 83507123 -56809642 - L1M3de LINE L1 -4936 1525 1300 1911 157 3 0 chr10 83507127 83507433 -56809332 - AluSq SINE Alu -2 311 5 465 283 33 0 chr10 83507943 83508095 -56808670 + MER112 DNA MER1_type 1 157 -103 507 294 69 39 chr10 83508390 83508621 -56808144 - MIR SINE MIR -4 258 21 609 264 88 26 chr10 83508712 83508985 -56807780 - MLT1I LTR MaLR -45 364 75 2136 129 0 0 chr10 83509354 83509665 -56807100 - AluSq SINE Alu 0 313 3 312 27 0 0 chr10 83510851 83510888 -56805877 + (CA)n Simple_repeat Simple_repeat 1 37 0 237 291 24 12 chr10 83510923 83511088 -56805677 + (CA)n Simple_repeat Simple_repeat 2 168 0 201 174 0 87 chr10 83511166 83511235 -56805530 + (CAGAGA)n Simple_repeat Simple_repeat 6 68 0 215 200 50 33 chr10 83511670 83511730 -56805035 - MIR SINE MIR -82 180 120 446 271 48 66 chr10 83512499 83512772 -56803993 - MER113 DNA MER1_type? -160 361 94 316 306 47 17 chr10 83513307 83513542 -56803223 - L1M4 LINE L1 -3224 2922 2681 323 340 49 0 chr10 83513610 83513754 -56803011 - L1M4 LINE L1 -3526 2620 2470 2129 82 0 24 chr10 83514878 83515171 -56801594 - AluSc SINE Alu -23 286 1 1801 129 13 30 chr10 83515540 83515843 -56800922 - AluSq SINE Alu -11 302 5 1183 150 84 14 chr10 83516079 83516292 -56800473 - MER30 DNA MER1_type -2 228 1 35 54 0 0 chr10 83516832 83516888 -56799877 + AT_rich Low_complexity Low_complexity 1 56 0 1820 173 99 19 chr10 83517037 83517460 -56799305 - LTR48 LTR ERV1 0 787 331 456 198 0 10 chr10 83518681 83518782 -56797983 - L1MB2 LINE L1 -3 6168 6069 183 309 73 0 chr10 83520193 83520261 -56796504 + L2 LINE L2 3148 3220 -52 207 100 0 0 chr10 83520538 83520568 -56796197 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr10 83520740 83520761 -56796004 + (A)n Simple_repeat Simple_repeat 1 21 0 207 0 0 0 chr10 83521608 83521631 -56795134 + (CCG)n Simple_repeat Simple_repeat 2 24 0 269 287 66 53 chr10 83525471 83525657 -56791108 + MIR SINE MIR 16 208 -54 1422 197 0 36 chr10 83527603 83527912 -56788853 - AluJb SINE Alu -14 298 1 256 232 50 10 chr10 83529495 83529594 -56787171 + L1ME3 LINE L1 5969 6071 -91 355 183 39 13 chr10 83530000 83530153 -56786612 + GA-rich Low_complexity Low_complexity 2 158 0 287 307 0 62 chr10 83530321 83530513 -56786252 + GA-rich Low_complexity Low_complexity 1 180 0 2168 119 0 0 chr10 83531126 83531438 -56785327 - AluSx SINE Alu 0 312 1 192 207 259 0 chr10 83532019 83532077 -56784688 + MIR SINE MIR 100 172 -90 225 311 0 0 chr10 83532224 83532314 -56784451 + L1M4 LINE L1 4744 4833 -1313 881 117 0 0 chr10 83532413 83532533 -56784232 + AluSq/x SINE Alu 1 120 -193 2191 120 0 0 chr10 83533097 83533396 -56783369 + AluSx SINE Alu 1 299 -13 185 270 230 14 chr10 83533901 83533975 -56782790 + MIR SINE MIR 60 149 -113 2173 86 7 10 chr10 83534074 83534375 -56782390 + AluSq SINE Alu 1 300 -13 359 362 46 9 chr10 83534997 83535215 -56781550 - MIR SINE MIR -15 247 22 4976 120 12 15 chr10 83536082 83536942 -56779823 - HSMAR2 DNA Mariner -2 1300 352 1628 121 0 0 chr10 83536942 83537173 -56779592 - AluSg/x SINE Alu -4 306 76 4976 120 12 15 chr10 83537173 83537524 -56779241 - HSMAR2 DNA Mariner -950 352 2 216 0 0 0 chr10 83538910 83538934 -56777831 + (TGAG)n Simple_repeat Simple_repeat 4 27 0 39 38 0 0 chr10 83539043 83539096 -56777669 + AT_rich Low_complexity Low_complexity 1 53 0 300 298 104 65 chr10 83539104 83539383 -56777382 + L1 LINE L1 2667 2956 -3190 294 316 21 0 chr10 83540598 83540693 -56776072 - L1ME LINE L1 -541 5580 5484 4759 36 19 7 chr10 83540714 83541291 -56775474 - L1PA5 LINE L1 0 6154 5571 186 133 0 0 chr10 83541306 83541336 -56775429 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 1515 186 92 12 chr10 83541629 83541967 -56774798 + MLT1A1 LTR MaLR 1 365 0 3531 72 126 24 chr10 83542621 83543159 -56773606 + LTR61 LTR ERV1 2 594 -1 205 333 120 26 chr10 83543383 83543500 -56773265 - L2 LINE L2 -23 3249 3122 685 167 51 0 chr10 83543535 83543673 -56773092 + L1MA9 LINE L1 6168 6312 0 26 50 0 0 chr10 83543738 83543778 -56772987 + AT_rich Low_complexity Low_complexity 1 40 0 307 282 122 20 chr10 83544111 83544356 -56772409 - L2 LINE L2 -358 2956 2687 * 607 294 50 5 chr10 83544353 83544574 -56772191 + L2 LINE L2 1879 2109 -1205 185 318 11 34 chr10 83545367 83545455 -56771310 + MIR SINE MIR 103 188 -74 411 329 79 9 chr10 83546903 83547119 -56769646 + MIR SINE MIR 25 255 -7 452 241 28 0 chr10 83549477 83549585 -56767180 - MER103 DNA DNA 0 166 56 225 282 113 0 chr10 83550825 83550896 -56765869 - MIR SINE MIR -70 138 60 432 35 69 35 chr10 83553579 83553695 -56763070 + (CACAG)n Simple_repeat Simple_repeat 2 121 0 181 349 24 12 chr10 83557318 83557401 -56759364 + MIR SINE MIR 58 141 -67 327 240 154 0 chr10 83558106 83558210 -56758555 + MIR SINE MIR 69 188 -74 2015 127 0 10 chr10 83559691 83559990 -56756775 - AluSx SINE Alu -16 296 1 207 0 0 0 chr10 83560794 83560817 -56755948 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1066 164 31 62 chr10 83561705 83561931 -56754834 - MER20 DNA MER1_type 0 219 1 1050 114 85 11 chr10 83562136 83562312 -56754453 + MER5A DNA MER1_type 1 189 0 948 155 53 25 chr10 83562883 83563121 -56753644 + L1MA6 LINE L1 6029 6294 -6 246 62 0 0 chr10 83563351 83563383 -56753382 + (TTC)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 83564153 83564176 -56752589 + (TG)n Simple_repeat Simple_repeat 2 24 0 492 326 74 21 chr10 83565426 83565668 -56751097 + MIR SINE MIR 8 262 0 413 256 22 74 chr10 83565724 83565850 -56750915 - L1MC4a LINE L1 -157 5964 5833 1899 132 0 20 chr10 83565850 83566145 -56750620 - AluSg SINE Alu -20 290 2 413 256 22 74 chr10 83566145 83566291 -56750474 - L1MC4a LINE L1 -288 5833 5683 789 158 0 0 chr10 83567218 83567338 -56749427 + MER39 LTR ERV1 588 707 0 2168 123 0 0 chr10 83568136 83568446 -56748319 + AluSx SINE Alu 1 310 -2 1449 286 86 42 chr10 83568750 83569449 -56747316 + L1MB5 LINE L1 2 731 -5811 1970 120 6 22 chr10 83569450 83569800 -56746965 - MER4A LTR ERV1 -1 663 261 683 111 0 10 chr10 83569800 83569899 -56746866 - MER4A LTR ERV1 -566 98 1 1271 210 56 84 chr10 83569899 83570361 -56746404 + L1MB5 LINE L1 728 1176 -5366 1042 156 6 0 chr10 83570361 83570534 -56746231 + AluSg/x SINE Alu 132 305 -7 2616 225 25 55 chr10 83570534 83571430 -56745335 + L1MB5 LINE L1 1179 2047 -4599 1905 149 3 0 chr10 83571738 83572040 -56744725 - AluSq SINE Alu -10 303 1 26 30 0 0 chr10 83574231 83574264 -56742501 + AT_rich Low_complexity Low_complexity 1 33 0 2017 116 0 7 chr10 83574286 83574588 -56742177 + AluY SINE Alu 1 300 -11 280 255 110 7 chr10 83574653 83574798 -56741967 + L1MB5 LINE L1 2212 2371 -4275 718 182 0 47 chr10 83574805 83574953 -56741812 + AluJo SINE Alu 10 150 -162 442 217 0 0 chr10 83575062 83575154 -56741611 + AluJ/FRAM SINE Alu 218 309 -3 3405 217 41 167 chr10 83575165 83576416 -56740349 + L1MB5 LINE L1 2368 3775 -2869 1182 191 32 18 chr10 83576416 83576698 -56740067 + AluJb SINE Alu 11 296 -16 3405 217 41 167 chr10 83576698 83576910 -56739855 + L1MB5 LINE L1 3775 4012 -2632 1867 158 3 3 chr10 83576910 83577208 -56739557 + AluSx SINE Alu 1 298 -14 3405 217 41 167 chr10 83577208 83577650 -56739115 + L1MB5 LINE L1 4012 4283 -2361 1721 179 3 0 chr10 83577651 83577953 -56738812 + AluJo SINE Alu 1 303 -9 40125 74 9 7 chr10 83577967 83583718 -56733047 + L1PA6 LINE L1 11 5777 -377 2388 71 0 7 chr10 83583718 83584027 -56732738 + AluY SINE Alu 5 311 0 40125 74 9 7 chr10 83584027 83584402 -56732363 + L1PA6 LINE L1 5777 6150 -4 5188 178 57 64 chr10 83584390 83586698 -56730067 + L1MB5 LINE L1 4265 6542 -130 * 1929 150 0 7 chr10 83586698 83586984 -56729781 + AluSx SINE Alu 1 284 -28 5188 178 57 64 chr10 83586984 83587115 -56729650 + L1MB5 LINE L1 6542 6672 0 1935 157 98 51 chr10 83587387 83587796 -56728969 - MSTA LTR MaLR 0 428 1 2363 73 0 3 chr10 83587855 83588156 -56728609 + AluY SINE Alu 1 300 -11 267 93 0 0 chr10 83588479 83588522 -56728243 + (TC)n Simple_repeat Simple_repeat 2 44 0 533 251 78 34 chr10 83588616 83588795 -56727970 - MER5A DNA MER1_type -2 187 1 323 230 74 44 chr10 83588847 83588982 -56727783 - MLT1J LTR MaLR -367 144 6 2468 50 0 13 chr10 83589317 83589617 -56727148 - AluY SINE Alu -15 296 1 571 287 91 32 chr10 83589629 83589970 -56726795 - L1ME LINE L1 -301 5820 5460 305 122 20 0 chr10 83590037 83590086 -56726679 - MIR SINE MIR -1 261 212 374 259 54 18 chr10 83590194 83590306 -56726459 + MIR SINE MIR 97 212 -50 22 0 0 0 chr10 83590572 83590594 -56726171 + AT_rich Low_complexity Low_complexity 1 22 0 1973 130 55 0 chr10 83591244 83591536 -56725229 - AluSx SINE Alu -4 308 1 2538 53 0 3 chr10 83591933 83592234 -56724531 + AluY SINE Alu 1 300 -11 21 36 0 0 chr10 83592271 83592299 -56724466 + AT_rich Low_complexity Low_complexity 1 28 0 391 331 41 80 chr10 83592648 83593010 -56723755 + L2 LINE L2 2629 2976 -338 452 262 28 21 chr10 83593560 83593701 -56723064 + L2 LINE L2 3172 3313 0 3275 172 35 27 chr10 83593726 83594383 -56722382 - L1MC3 LINE L1 -6 7779 7118 1064 101 0 0 chr10 83594383 83594521 -56722244 - AluSp/q SINE Alu -13 300 163 398 146 0 12 chr10 83594527 83594609 -56722156 - L1MC3 LINE L1 -151 7634 7554 1136 101 0 20 chr10 83594609 83594758 -56722007 - AluSq/x SINE Alu -162 150 5 2371 187 96 7 chr10 83594761 83595301 -56721464 - L1MC3 LINE L1 -658 7127 6540 1177 219 98 39 chr10 83595337 83595907 -56720858 + L1M4 LINE L1 2113 2823 -3323 5034 111 50 41 chr10 83596532 83597899 -56718866 - pTR5 LTR ERV1 0 2438 741 253 335 3 0 chr10 83597901 83598009 -56718756 - L1MDb LINE L1 -5947 449 20 2077 119 0 3 chr10 83598043 83598328 -56718437 - AluSx SINE Alu -28 284 1 565 207 0 9 chr10 83598850 83598961 -56717804 + Alu SINE Alu 2 111 -200 * 666 177 7 50 chr10 83598959 83599100 -56717665 - AluSp SINE Alu -69 244 110 697 197 0 0 chr10 83599201 83599343 -56717422 - L1 LINE L1 -1664 4482 4341 4342 174 36 37 chr10 83599348 83599975 -56716790 + Cheshire DNA MER1_type 1484 2111 -309 2219 69 10 0 chr10 83599975 83600264 -56716501 - AluY SINE Alu -19 292 1 4342 174 36 37 chr10 83600264 83600545 -56716220 + Cheshire DNA MER1_type 2111 2391 -29 425 323 145 35 chr10 83601903 83602303 -56714462 + L2 LINE L2 1001 1444 -1870 224 275 310 4 chr10 83602488 83602717 -56714048 + L2 LINE L2 1758 2056 -1258 427 346 38 0 chr10 83603983 83604168 -56712597 - MIR SINE MIR -70 192 1 458 92 0 31 chr10 83604386 83604451 -56712314 - AluY SINE Alu -166 145 83 1593 66 0 5 chr10 83604566 83604764 -56712001 + AluY SINE Alu 100 296 -15 233 276 0 79 chr10 83604807 83604839 -56711926 - L2 LINE L2 -2 3311 3278 2367 102 3 0 chr10 83604839 83605143 -56711622 + AluSq SINE Alu 2 306 -7 233 276 0 79 chr10 83605143 83605186 -56711579 - L2 LINE L2 -35 3278 3242 1695 193 21 20 chr10 83605190 83605551 -56711214 + MLT1A1 LTR MaLR 1 365 0 296 383 77 50 chr10 83605551 83605851 -56710914 - L2 LINE L2 -93 3179 2872 1300 233 115 6 chr10 83606014 83606370 -56710395 + L1MC4a LINE L1 5536 5930 -1878 331 154 111 136 chr10 83606420 83606582 -56710183 + L1MC4a LINE L1 6191 6348 -1460 21 0 0 0 chr10 83606618 83606639 -56710126 + AT_rich Low_complexity Low_complexity 1 21 0 199 208 260 0 chr10 83608506 83608583 -56708182 - L2 LINE L2 -10 3303 3207 1913 138 7 3 chr10 83608725 83609023 -56707742 + AluSx SINE Alu 1 299 -13 242 174 22 0 chr10 83609339 83609385 -56707380 - MER5A DNA MER1_type -98 91 45 3722 119 21 70 chr10 83609393 83610308 -56706457 - pTR5 LTR ERV1 -143 2295 1113 483 86 111 0 chr10 83610408 83610489 -56706276 - pTR5 LTR ERV1 -1604 834 745 1913 189 93 0 chr10 83610661 83611057 -56705708 - MLT1D LTR MaLR -65 440 8 4388 202 58 31 chr10 83611059 83611200 -56705565 - L1MC4 LINE L1 -220 7822 7686 1946 151 0 40 chr10 83611200 83611525 -56705240 - AluJb SINE Alu 0 312 1 4388 202 58 31 chr10 83611525 83612529 -56704236 - L1MC4 LINE L1 -356 7686 6646 2312 93 0 19 chr10 83613789 83614100 -56702665 - AluSc SINE Alu -4 305 1 1014 236 138 77 chr10 83614751 83615230 -56701535 - Charlie2 DNA MER1_type -2272 590 83 1035 222 84 89 chr10 83616121 83616475 -56700290 - L1MEc LINE L1 -5152 1244 893 2476 88 0 0 chr10 83616475 83616783 -56699982 - AluSg SINE Alu -2 308 1 1035 222 84 89 chr10 83616783 83617014 -56699751 - L1MEc LINE L1 -5503 893 662 1999 94 102 105 chr10 83617677 83618093 -56698672 - LTR14B LTR ERVK 0 608 1 5199 138 44 29 chr10 83618244 83618947 -56697818 - L1MB3 LINE L1 0 6183 5471 203 88 29 0 chr10 83618947 83618981 -56697784 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5199 138 44 29 chr10 83618981 83619273 -56697492 - L1MB3 LINE L1 -712 5471 5185 901 258 268 10 chr10 83619340 83619736 -56697029 + L2 LINE L2 2183 2680 -634 6912 83 16 6 chr10 83619876 83620865 -56695900 + L1PA12 LINE L1 5171 6168 0 2310 109 0 0 chr10 83621130 83621423 -56695342 - AluSx SINE Alu -19 293 1 369 205 181 0 chr10 83621498 83621581 -56695184 - MER45A DNA AcHobo -1 177 80 2307 104 10 0 chr10 83622472 83622781 -56693984 + AluSx SINE Alu 1 312 0 1763 163 14 0 chr10 83622834 83623122 -56693643 + AluJb SINE Alu 11 302 -10 677 245 25 31 chr10 83623138 83623334 -56693431 - MIR SINE MIR 0 262 68 1898 181 36 0 chr10 83624867 83625199 -56691566 - MLT1A1 LTR MaLR 0 365 22 2032 132 26 3 chr10 83625231 83625535 -56691230 + AluSx SINE Alu 1 311 -1 1537 144 30 4 chr10 83625707 83625943 -56690822 + AluSx SINE Alu 1 242 -70 307 149 0 0 chr10 83626125 83626196 -56690569 - AluJb SINE Alu 0 313 243 331 154 0 0 chr10 83626296 83626348 -56690417 - Alu SINE Alu -250 52 1 2424 52 10 3 chr10 83626379 83626669 -56690096 + AluY SINE Alu 1 292 -19 705 173 16 24 chr10 83627917 83628044 -56688721 - AluJb SINE Alu -54 258 133 1989 123 60 0 chr10 83628270 83628555 -56688210 + AluSg SINE Alu 1 302 -8 2739 122 166 4 chr10 83629029 83629512 -56687253 - Tigger1 DNA MER2_type 0 2418 1858 * 9883 113 25 39 chr10 83629510 83629811 -56686954 - Tigger1 DNA MER2_type -822 1596 1292 2090 125 0 41 chr10 83629811 83630131 -56686634 + AluSq SINE Alu 1 307 -6 9883 113 25 39 chr10 83630131 83630928 -56685837 - Tigger1 DNA MER2_type -1126 1292 524 2145 113 13 13 chr10 83630928 83631228 -56685537 - AluSx SINE Alu -12 300 1 9883 113 25 39 chr10 83631228 83631678 -56685087 - Tigger1 DNA MER2_type -1894 524 69 405 0 0 0 chr10 83631680 83631725 -56685040 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1050 132 0 7 chr10 83631727 83631879 -56684886 - AluSg/x SINE Alu -28 284 134 2247 101 7 3 chr10 83631879 83632175 -56684590 - AluSx SINE Alu -15 297 1 240 380 37 9 chr10 83632371 83632479 -56684286 - MIR SINE MIR -65 143 33 520 200 11 0 chr10 83632986 83633081 -56683684 + MER5A DNA MER1_type 14 109 -80 522 278 52 39 chr10 83634335 83634696 -56682069 + L1ME2 LINE L1 5276 5635 -486 555 223 153 6 chr10 83634731 83634888 -56681877 + MER5A DNA MER1_type 7 186 -3 300 284 135 37 chr10 83635030 83635245 -56681520 + L1ME2 LINE L1 5648 5886 -278 306 0 0 0 chr10 83635832 83635866 -56680899 + (TA)n Simple_repeat Simple_repeat 2 35 0 2673 53 0 0 chr10 83635866 83636170 -56680595 - AluY SINE Alu -7 304 1 237 305 0 0 chr10 83636606 83636665 -56680100 + L2 LINE L2 3210 3268 -4 631 183 108 0 chr10 83637673 83637793 -56678972 + FLAM_C SINE Alu 1 133 0 647 209 20 7 chr10 83638618 83638766 -56677999 - MIR SINE MIR 0 262 113 276 317 135 0 chr10 83639840 83639944 -56676821 + L2 LINE L2 3144 3261 -11 261 0 0 0 chr10 83640153 83640182 -56676583 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1782 213 193 3 chr10 83640426 83641020 -56675745 + L1M4 LINE L1 1214 1920 -4726 5911 138 39 7 chr10 83641023 83642805 -56673960 + L1MA3 LINE L1 4220 6061 -244 1742 118 14 7 chr10 83642928 83643216 -56673549 + L1MA2 LINE L1 6015 6304 0 2052 154 88 0 chr10 83644071 83644435 -56672330 - MSTD LTR MaLR 0 396 1 2268 114 3 13 chr10 83645151 83645467 -56671298 - AluSq SINE Alu 0 313 1 538 345 179 4 chr10 83646002 83646694 -56670071 + L2 LINE L2 2045 2857 -457 210 383 37 0 chr10 83646862 83646969 -56669796 + L2 LINE L2 3142 3252 -20 353 230 195 9 chr10 83647444 83647557 -56669208 - MER94 DNA DNA 0 134 1 343 277 151 0 chr10 83647585 83647704 -56669061 + L2 LINE L2 3136 3272 0 186 71 0 0 chr10 83648028 83648056 -56668709 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 28 29 0 0 chr10 83648981 83649016 -56667749 + AT_rich Low_complexity Low_complexity 1 35 0 186 247 123 14 chr10 83650133 83650206 -56666559 - L3 LINE CR1 -261 1316 1236 808 89 37 15 chr10 83650318 83650453 -56666312 - L1MA4 LINE L1 -1 6299 6162 1759 92 0 4 chr10 83650865 83651093 -56665672 + AluSg/x SINE Alu 84 310 0 2436 86 3 0 chr10 83651363 83651664 -56665101 + AluSp SINE Alu 1 302 -11 237 267 11 46 chr10 83651688 83651813 -56664952 - MIR SINE MIR -81 127 41 2359 109 0 0 chr10 83652329 83652631 -56664134 + AluSx SINE Alu 11 312 0 1755 236 62 0 chr10 83652706 83653112 -56663653 + Cheshire DNA MER1_type 2 432 -1988 745 139 15 44 chr10 83653122 83653259 -56663506 + FLAM_A SINE Alu 10 142 0 5177 182 31 18 chr10 83653260 83653472 -56663293 + Cheshire DNA MER1_type 443 651 -1769 1898 112 77 14 chr10 83653472 83653758 -56663007 + AluSx SINE Alu 1 304 -8 5177 182 31 18 chr10 83653758 83654157 -56662608 + Cheshire DNA MER1_type 651 1044 -1376 2823 73 3 0 chr10 83654157 83654511 -56662254 + THE1A LTR MaLR 1 355 0 5177 182 31 18 chr10 83654511 83654939 -56661826 + Cheshire DNA MER1_type 1044 1496 -924 293 243 0 27 chr10 83655096 83655170 -56661595 - Tigger1 DNA MER2_type -2346 72 1 2314 119 0 0 chr10 83656546 83656858 -56659907 - AluSx SINE Alu 0 312 1 189 107 0 0 chr10 83656891 83656919 -56659846 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 1183 106 55 18 chr10 83656932 83657149 -56659616 - L1MA8 LINE L1 -99 6192 5968 256 138 31 131 chr10 83657431 83657561 -56659204 - L2 LINE L2 -85 3228 3112 850 192 158 42 chr10 83657584 83657705 -56659060 - L1M4 LINE L1 -1127 5019 4913 2677 55 0 0 chr10 83657705 83658016 -56658749 + AluY SINE Alu 1 311 0 850 192 158 42 chr10 83658016 83658154 -56658611 - L1M4 LINE L1 -1233 4913 4730 1078 72 0 0 chr10 83658165 83658303 -56658462 + Alu SINE Alu 173 310 0 709 227 31 0 chr10 83658310 83658504 -56658261 - L1M4 LINE L1 -1412 4734 4535 756 206 172 0 chr10 83658504 83658684 -56658081 - AluJb SINE Alu 0 312 102 552 215 0 0 chr10 83658796 83658903 -56657862 - AluJ SINE Alu -204 108 2 1813 169 7 0 chr10 83658904 83659199 -56657566 - AluJo SINE Alu -15 297 1 1392 230 75 37 chr10 83659207 83659672 -56657093 - L1M4 LINE L1 -1612 4534 4052 335 152 0 170 chr10 83659677 83659789 -56656976 - L1M4 LINE L1 -2391 3755 3663 248 217 22 0 chr10 83659906 83659952 -56656813 - L1MCb LINE L1 -5482 563 517 1027 299 50 52 chr10 83659994 83660218 -56656547 - L1MCb LINE L1 -5524 521 298 2548 54 0 0 chr10 83660218 83660515 -56656250 + AluY SINE Alu 1 297 -14 1027 299 50 52 chr10 83660515 83660607 -56656158 - L1MCb LINE L1 -5747 298 207 1199 197 203 3 chr10 83660607 83660912 -56655853 - MER47A DNA MER2_type 0 366 1 1027 299 50 52 chr10 83660912 83661116 -56655649 - L1MCb LINE L1 -5838 207 1 203 284 80 11 chr10 83661214 83661302 -56655463 - MIR SINE MIR -83 179 86 2160 128 0 19 chr10 83661461 83661773 -56654992 + AluSx SINE Alu 1 306 -6 339 281 25 8 chr10 83661845 83661966 -56654799 + MIR SINE MIR 23 145 -63 453 300 67 6 chr10 83662636 83662816 -56653949 + MIR SINE MIR 48 238 -24 245 270 147 44 chr10 83663811 83663888 -56652877 - MIR SINE MIR -32 230 162 2461 63 0 41 chr10 83663888 83664207 -56652558 - AluY SINE Alu -5 306 1 245 270 147 44 chr10 83664207 83664333 -56652432 - MIR SINE MIR -100 162 6 1948 142 14 10 chr10 83664776 83665071 -56651694 + AluSx SINE Alu 1 296 -16 1893 158 0 16 chr10 83665438 83665742 -56651023 + AluJo SINE Alu 1 299 -13 1863 140 0 0 chr10 83665914 83666178 -56650587 + AluSx SINE Alu 26 289 -23 22 70 0 0 chr10 83666178 83666221 -56650544 + AT_rich Low_complexity Low_complexity 1 43 0 2396 86 10 0 chr10 83666225 83666527 -56650238 + AluSg SINE Alu 1 305 -5 351 303 148 30 chr10 83667296 83667487 -56649278 - L2 LINE L2 -75 3197 2956 2108 94 4 0 chr10 83667487 83667796 -56648969 - AluSx SINE Alu 0 316 7 351 303 148 30 chr10 83667796 83667900 -56648865 - L2 LINE L2 -316 2956 2866 2645 58 0 3 chr10 83668889 83669200 -56647565 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 83669213 83669241 -56647524 + AT_rich Low_complexity Low_complexity 1 28 0 1979 123 70 0 chr10 83669854 83670138 -56646627 - AluSg SINE Alu -6 304 1 2668 206 29 41 chr10 83670189 83670559 -56646206 + L1ME1 LINE L1 5520 5880 -286 2242 114 0 23 chr10 83670559 83670867 -56645898 + AluSx SINE Alu 2 302 -10 2668 206 29 41 chr10 83670867 83671150 -56645615 + L1ME1 LINE L1 5880 6165 -1 432 213 45 64 chr10 83671255 83671419 -56645346 - L1MA9 LINE L1 0 6291 6135 2416 64 0 10 chr10 83671426 83671723 -56645042 + AluY SINE Alu 6 299 -12 1368 79 0 6 chr10 83671723 83671901 -56644864 + AluY SINE Alu 133 309 -2 1038 231 25 56 chr10 83671905 83672226 -56644539 - L1MA9 LINE L1 -172 6140 5830 1426 254 90 15 chr10 83672430 83672872 -56643893 - MER77 LTR ERV1 -4 601 160 716 267 134 65 chr10 83672931 83673340 -56643425 - MLT1L LTR MaLR -34 581 123 3729 107 0 4 chr10 83673340 83673853 -56642912 + MER9 LTR ERVK 1 511 0 716 267 134 65 chr10 83673853 83673986 -56642779 - MLT1L LTR MaLR -492 123 1 1096 118 0 0 chr10 83674079 83674231 -56642534 + AluSg/x SINE Alu 154 305 -5 306 73 0 0 chr10 83674231 83674272 -56642493 + (TA)n Simple_repeat Simple_repeat 1 41 0 752 203 86 5 chr10 83674565 83674752 -56642013 + MIR SINE MIR 34 235 -27 27 62 0 0 chr10 83674753 83674801 -56641964 + AT_rich Low_complexity Low_complexity 1 48 0 879 116 0 8 chr10 83674843 83674964 -56641801 + AluJo/FLAM SINE Alu 11 130 -182 1825 162 0 35 chr10 83674967 83675282 -56641483 + AluJo SINE Alu 1 304 -8 292 286 69 20 chr10 83675448 83675651 -56641114 - L1M4 LINE L1 -2145 4001 3789 2253 226 54 70 chr10 83675669 83675895 -56640870 + HsTC2 DNA Tc2 15 243 -1655 719 178 0 0 chr10 83675895 83676013 -56640752 + AluJo/FLAM SINE Alu 1 118 -184 2410 62 3 31 chr10 83676013 83676333 -56640432 - AluY SINE Alu 0 311 1 2253 226 54 70 chr10 83676333 83676344 -56640421 + HsTC2 DNA Tc2 242 252 -1646 2489 65 0 3 chr10 83676344 83676653 -56640112 - AluY SINE Alu -3 308 1 2253 226 54 70 chr10 83676653 83677084 -56639681 + HsTC2 DNA Tc2 252 674 -1224 660 203 14 134 chr10 83677082 83677329 -56639436 + HsTC2 DNA Tc2 1328 1719 -179 * 246 274 51 23 chr10 83677455 83677627 -56639138 + MLT1L LTR MaLR 371 611 -4 451 70 35 35 chr10 83678987 83679102 -56637663 + (TA)n Simple_repeat Simple_repeat 1 115 0 2374 94 0 0 chr10 83679575 83679873 -56636892 - AluSx SINE Alu -14 298 1 1592 146 56 31 chr10 83679930 83680218 -56636547 - AluJb SINE Alu -12 300 6 189 286 89 0 chr10 83682960 83683016 -56633749 - MIR SINE MIR -61 147 87 429 215 6 120 chr10 83683814 83683972 -56632793 + MIR3 SINE MIR 6 145 -63 269 368 33 22 chr10 83684450 83684632 -56632133 - MIR3 SINE MIR -6 202 19 280 296 67 103 chr10 83684747 83685088 -56631677 - L2 LINE L2 -8 3264 2936 297 349 61 13 chr10 83685199 83685428 -56631337 - L2 LINE L2 -617 2697 2458 180 368 26 0 chr10 83685487 83685563 -56631202 - L2 LINE L2 -940 2374 2297 282 302 94 50 chr10 83686949 83687108 -56629657 + MIR SINE MIR 27 192 -70 245 268 0 61 chr10 83688593 83688675 -56628090 - L2 LINE L2 -4 3268 3192 234 280 215 0 chr10 83689059 83689166 -56627599 - MER5A DNA MER1_type 0 189 60 2077 183 36 87 chr10 83689248 83689897 -56626868 - LTR6A LTR ERV1 0 564 1 1292 173 184 0 chr10 83690064 83690319 -56626446 - AluJo SINE Alu 0 302 1 1593 166 60 3 chr10 83690345 83690676 -56626089 - L1PB4 LINE L1 0 6156 5807 2340 114 0 0 chr10 83691289 83691595 -56625170 - AluSc SINE Alu -3 306 1 2679 54 3 3 chr10 83691606 83691919 -56624846 - AluSp SINE Alu 0 313 1 309 207 0 0 chr10 83693871 83693929 -56622836 - MER103 DNA DNA -105 61 4 503 257 40 40 chr10 83694035 83694210 -56622555 - MIR SINE MIR -11 251 77 405 282 32 16 chr10 83695535 83695686 -56621079 - MIR3 SINE MIR -2 206 56 971 196 152 5 chr10 83696073 83696297 -56620468 - MLT1D LTR MaLR 0 505 249 1768 141 40 50 chr10 83696599 83696896 -56619869 + AluJo SINE Alu 1 294 -18 2019 110 20 47 chr10 83696896 83697196 -56619569 + AluSx SINE Alu 1 292 -20 188 342 70 18 chr10 83697612 83697726 -56619039 - L2 LINE L2 -22 3291 3172 1715 162 48 6 chr10 83698512 83698863 -56617902 + MER47A DNA MER2_type 1 366 0 2189 140 3 0 chr10 83699174 83699474 -56617291 + AluSx SINE Alu 1 301 -11 281 358 52 0 chr10 83700004 83700163 -56616602 - MIR SINE MIR -58 204 28 236 286 14 0 chr10 83700169 83700239 -56616526 - MIR SINE MIR -122 86 16 1966 124 3 37 chr10 83700689 83700987 -56615778 + AluSx SINE Alu 1 288 -24 1544 96 0 5 chr10 83701216 83701413 -56615352 - AluY SINE Alu -14 297 102 358 142 134 3 chr10 83701415 83701490 -56615275 - AluY SINE Alu -232 67 1 314 298 66 45 chr10 83701632 83701830 -56614935 - MIR SINE MIR -33 229 28 631 144 0 29 chr10 83701833 83702006 -56614759 + (CCCTG)n Simple_repeat Simple_repeat 3 170 0 2440 103 0 3 chr10 83702402 83702714 -56614051 - AluSq SINE Alu -2 311 1 1348 147 5 5 chr10 83702765 83702976 -56613789 + AluJo SINE Alu 90 300 -12 269 255 0 0 chr10 83703130 83703187 -56613578 - L1ME LINE L1 -236 5885 5826 2127 121 0 37 chr10 83703187 83703510 -56613255 - AluSx SINE Alu -1 311 1 269 255 0 0 chr10 83703510 83703546 -56613219 - L1ME LINE L1 -294 5827 5792 222 359 53 23 chr10 83704127 83704258 -56612507 + L2 LINE L2 3136 3270 -2 2183 128 13 0 chr10 83704671 83704969 -56611796 + AluSx SINE Alu 1 302 -10 2321 102 0 3 chr10 83706162 83706457 -56610308 + AluSq SINE Alu 1 294 -19 2298 208 57 67 chr10 83706810 83707244 -56609521 - MER67B LTR ERV1 -14 647 221 2252 107 0 0 chr10 83707244 83707534 -56609231 + AluSx SINE Alu 1 290 -22 2298 208 57 67 chr10 83707534 83707753 -56609012 - MER67B LTR ERV1 -440 221 1 1030 185 130 30 chr10 83707792 83708062 -56608703 - AluJo SINE Alu -5 297 1 383 116 14 29 chr10 83708066 83708135 -56608630 - MER5A DNA MER1_type -118 71 4 581 207 71 41 chr10 83708319 83708428 -56608337 + MER5B DNA MER1_type 3 120 -58 1743 170 10 13 chr10 83708428 83708728 -56608037 - AluJo SINE Alu -13 299 1 581 207 71 41 chr10 83708728 83708787 -56607978 + MER5B DNA MER1_type 120 176 -2 3703 129 28 7 chr10 83708880 83709494 -56607271 + MER39B LTR ERV1 22 648 -5 993 214 92 10 chr10 83710172 83710475 -56606290 - L2 LINE L2 -532 2782 2455 262 261 31 0 chr10 83710484 83710549 -56606216 - L2 LINE L2 -816 2498 2432 644 204 0 23 chr10 83710865 83710997 -56605768 + MER5B DNA MER1_type 50 178 0 1522 163 92 57 chr10 83711168 83711591 -56605174 + L1MC5 LINE L1 6693 7130 -831 2378 119 0 0 chr10 83711831 83712143 -56604622 + AluSx SINE Alu 1 312 0 2139 126 71 96 chr10 83712145 83712461 -56604304 + L1MA8 LINE L1 5498 5820 -471 715 192 15 0 chr10 83712461 83712591 -56604174 + FLAM_A SINE Alu 2 133 0 2139 126 71 96 chr10 83712591 83712731 -56604034 + L1MA8 LINE L1 5820 5944 -347 2339 91 3 41 chr10 83712731 83713050 -56603715 + AluSx SINE Alu 1 307 -5 2139 126 71 96 chr10 83713050 83713083 -56603682 + L1MA8 LINE L1 5944 5976 -315 4493 127 6 62 chr10 83713083 83713502 -56603263 + MER70A-int LTR ERVL 4275 4631 -392 2353 106 0 25 chr10 83713502 83713823 -56602942 + AluSq SINE Alu 1 313 0 4493 127 6 62 chr10 83713823 83714191 -56602574 + MER70A-int LTR ERVL 4631 5018 -5 1123 127 17 0 chr10 83714201 83714374 -56602391 + MER70A LTR ERVL 1 176 -296 2079 109 11 0 chr10 83714374 83714648 -56602117 + AluSx SINE Alu 1 277 -35 183 42 0 0 chr10 83714652 83714676 -56602089 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 282 0 0 0 chr10 83715462 83715495 -56601270 + MER72 LTR ERV1 688 720 -2 395 238 117 82 chr10 83716284 83716515 -56600250 - LTR16A LTR ERVL -99 351 113 213 39 0 0 chr10 83717107 83717133 -56599632 + (CA)n Simple_repeat Simple_repeat 2 27 0 187 293 155 44 chr10 83718349 83718530 -56598235 + L2 LINE L2 622 822 -2492 215 347 166 24 chr10 83718595 83719270 -56597495 + L2 LINE L2 967 1544 -1770 791 167 0 0 chr10 83719270 83719402 -56597363 - FLAM_C SINE Alu -1 132 1 215 347 166 24 chr10 83719402 83719819 -56596946 + L2 LINE L2 1544 2215 -1099 662 252 102 37 chr10 83719880 83720174 -56596591 + MLT1J LTR MaLR 107 419 -92 261 191 0 36 chr10 83720258 83720342 -56596423 + CT-rich Low_complexity Low_complexity 3 83 0 853 138 0 36 chr10 83720349 83720487 -56596278 - FLAM_C SINE Alu 0 133 1 276 297 0 14 chr10 83721057 83721131 -56595634 + MLT1K LTR MaLR 142 214 -374 2216 131 0 6 chr10 83721219 83721531 -56595234 - AluSx SINE Alu -2 310 1 260 233 55 0 chr10 83721729 83721802 -56594963 + MLT1K LTR MaLR 509 585 -3 415 368 29 0 chr10 83721860 83722034 -56594731 - MIR SINE MIR -34 228 50 21 0 0 0 chr10 83722415 83722436 -56594329 + AT_rich Low_complexity Low_complexity 1 21 0 555 117 0 0 chr10 83722522 83722599 -56594166 + AluS SINE Alu 2 78 -231 1678 129 48 10 chr10 83723245 83723556 -56593209 - THE1C LTR MaLR 0 375 53 1520 225 3 7 chr10 83723934 83724232 -56592533 + AluJb SINE Alu 1 297 -15 415 189 0 0 chr10 83724232 83724306 -56592459 + L1ME LINE L1 5495 5568 -598 418 276 0 0 chr10 83724351 83724456 -56592309 - FLAM_C SINE Alu -28 105 1 211 297 12 42 chr10 83724987 83725152 -56591613 + CT-rich Low_complexity Low_complexity 4 163 0 1058 154 6 0 chr10 83725364 83725526 -56591239 + FRAM SINE Alu 2 164 -12 332 319 194 0 chr10 83725585 83725776 -56590989 - MIR SINE MIR -32 230 3 2244 206 21 8 chr10 83726561 83727032 -56589733 + L1MA5 LINE L1 5470 5946 -354 1178 236 27 8 chr10 83727033 83727292 -56589473 + AluJo SINE Alu 1 264 -48 4147 98 32 11 chr10 83727992 83728615 -56588150 + SVA Other Other 224 859 -527 483 158 0 0 chr10 83729223 83729305 -56587460 - AluS SINE Alu -231 82 1 698 158 17 0 chr10 83729657 83729777 -56586988 - AluSq/x SINE Alu -183 130 9 824 144 23 0 chr10 83731039 83731171 -56585594 + FRAM SINE Alu 24 158 -18 392 290 140 47 chr10 83731179 83731395 -56585370 - MIR SINE MIR -26 236 4 2214 232 14 3 chr10 83731988 83732561 -56584204 - L1 LINE L1 -1080 5066 4488 1127 163 0 0 chr10 83732566 83732738 -56584027 - AluSp SINE Alu -6 307 136 1625 229 13 28 chr10 83732741 83733199 -56583566 - L1 LINE L1 -1656 4490 4040 1267 128 51 25 chr10 83733418 83734682 -56582083 + GSATII Satellite centromeric 1 1296 -25 229 253 13 13 chr10 83734860 83734935 -56581830 - MIR SINE MIR -80 182 108 1221 109 103 2 chr10 83736123 83736829 -56579936 + GSATII Satellite centromeric 1 776 -32 183 80 0 0 chr10 83737648 83737673 -56579092 + (A)n Simple_repeat Simple_repeat 1 25 0 243 0 0 0 chr10 83738739 83738766 -56577999 + (T)n Simple_repeat Simple_repeat 1 27 0 928 255 95 54 chr10 83740146 83740433 -56576332 - MER21B LTR ERV1 -57 806 499 1506 189 32 11 chr10 83740433 83740714 -56576051 - AluJo SINE Alu -14 298 12 928 255 95 54 chr10 83740714 83740794 -56575971 - MER21B LTR ERV1 -364 499 424 803 185 0 126 chr10 83740795 83741033 -56575732 + AluJb SINE Alu 2 209 -103 353 165 44 55 chr10 83743486 83743577 -56573188 - MIR SINE MIR -62 200 111 182 172 17 138 chr10 83744097 83744155 -56572610 + MER5A DNA MER1_type 35 85 -104 530 248 22 15 chr10 83744472 83744609 -56572156 - MIR SINE MIR -37 225 88 195 146 0 0 chr10 83744777 83744818 -56571947 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 566 236 82 32 chr10 83744913 83745133 -56571632 - MLT1K LTR MaLR 0 588 358 255 276 47 39 chr10 83745724 83745851 -56570914 + L2 LINE L2 2854 2981 -291 711 136 16 64 chr10 83745858 83745969 -56570796 + AluSx SINE Alu 15 121 -192 198 0 0 0 chr10 83745969 83745991 -56570774 + (CAA)n Simple_repeat Simple_repeat 2 23 0 711 136 16 64 chr10 83745991 83746004 -56570761 + AluSx SINE Alu 121 133 -180 1169 114 0 0 chr10 83746033 83746221 -56570544 + AluSx SINE Alu 125 312 0 629 256 17 28 chr10 83746221 83746401 -56570364 + MER63B DNA MER1_type 20 197 -239 732 256 62 0 chr10 83746649 83746844 -56569921 + MER63B DNA MER1_type 228 434 0 27 0 0 0 chr10 83748932 83748959 -56567806 + AT_rich Low_complexity Low_complexity 1 27 0 1423 117 120 21 chr10 83749122 83749405 -56567360 + L1MA9 LINE L1 5997 6307 -5 202 151 0 75 chr10 83749494 83749547 -56567218 + GA-rich Low_complexity Low_complexity 4 52 0 515 206 10 0 chr10 83750036 83750133 -56566632 - U6 snRNA snRNA -1 106 9 1778 81 0 0 chr10 83752416 83752637 -56564128 + AluSg/x SINE Alu 83 303 -7 268 228 0 0 chr10 83752653 83752710 -56564055 + L1ME LINE L1 5603 5659 -462 6949 37 19 1 chr10 83753665 83754579 -56562186 + L1P LINE L1 2551 3480 -2666 507 261 30 28 chr10 83755900 83756058 -56560707 + L1ME LINE L1 5500 5659 -462 22 0 0 0 chr10 83756129 83756151 -56560614 + AT_rich Low_complexity Low_complexity 1 22 0 828 231 77 16 chr10 83757553 83757800 -56558965 + AluJo SINE Alu 42 303 -9 1091 263 101 17 chr10 83757804 83758328 -56558437 - L2 LINE L2 -216 3097 2541 673 223 0 23 chr10 83758419 83758549 -56558216 + FLAM_C SINE Alu 1 127 -6 932 216 53 4 chr10 83758613 83758685 -56558080 + AluJo SINE Alu 49 116 -196 207 0 0 0 chr10 83758685 83758708 -56558057 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 932 216 53 4 chr10 83758708 83758862 -56557903 + AluJo SINE Alu 116 286 -26 21 0 0 0 chr10 83759004 83759025 -56557740 + AT_rich Low_complexity Low_complexity 1 21 0 240 217 9 94 chr10 83759026 83759132 -56557633 + LTR37A LTR ERV1 241 337 -89 1324 186 48 7 chr10 83759329 83759620 -56557145 - AluSg SINE Alu -7 303 1 1340 261 48 52 chr10 83762024 83762602 -56554163 - L1ME2 LINE L1 -134 6030 5455 192 257 129 14 chr10 83763261 83763331 -56553434 - L2 LINE L2 -57 3215 3138 2277 111 0 0 chr10 83764018 83764316 -56552449 - AluSc SINE Alu -11 298 1 1580 165 175 25 chr10 83764700 83765099 -56551666 + LTR1B LTR ERV1 368 826 0 4076 141 8 10 chr10 83765102 83765721 -56551044 + L1PA15 LINE L1 5544 6161 -4 268 326 57 16 chr10 83765742 83765935 -56550830 + L1ME LINE L1 5646 5846 -275 306 280 13 27 chr10 83766162 83766312 -56550453 + C-rich Low_complexity Low_complexity 4 151 0 1443 181 30 53 chr10 83766908 83767304 -56549461 - MLT2B3 LTR ERVL 0 554 183 2087 137 102 23 chr10 83767317 83767844 -56548921 + SATR1 Satellite Satellite 1 568 -121 242 310 5 38 chr10 83768073 83768257 -56548508 + T-rich Low_complexity Low_complexity 3 180 0 * 294 242 16 59 chr10 83768143 83768329 -56548436 + CT-rich Low_complexity Low_complexity 3 180 0 5657 130 20 11 chr10 83768461 83769821 -56546944 - L1PB1 LINE L1 -105 6046 4676 690 153 16 0 chr10 83769827 83769951 -56546814 - L1PB1 LINE L1 -2305 3841 3716 1697 222 86 13 chr10 83770562 83771085 -56545680 + L1M4 LINE L1 4771 5331 -815 1095 134 0 0 chr10 83771252 83771416 -56545349 + MER2 DNA MER2_type 66 229 -116 233 214 87 71 chr10 83772185 83772270 -56544495 - HAL1b LINE L1 -21 1327 1245 1918 127 4 4 chr10 83772270 83772545 -56544220 + AluSx SINE Alu 1 275 -37 336 102 0 0 chr10 83772549 83772598 -56544167 + (CA)n Simple_repeat Simple_repeat 2 50 0 233 214 87 71 chr10 83772598 83772633 -56544132 - HAL1b LINE L1 -105 1243 1200 755 152 30 8 chr10 83772660 83772792 -56543973 + MER5A DNA MER1_type 32 166 -23 706 183 0 0 chr10 83772796 83772911 -56543854 - Tigger1 DNA MER2_type 0 2418 2304 840 146 146 14 chr10 83772915 83773059 -56543706 + FRAM SINE Alu 1 160 -16 797 211 119 4 chr10 83773066 83773327 -56543438 - Tigger1 DNA MER2_type -106 2312 2022 8329 35 16 0 chr10 83773520 83774539 -56542226 - L1P LINE L1 -1504 4642 3608 209 229 0 16 chr10 83775057 83775118 -56541647 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 7841 17 0 0 chr10 83775119 83775997 -56540768 - L1PA2 LINE L1 -11 6144 5267 27 0 0 0 chr10 83776520 83776547 -56540218 + AT_rich Low_complexity Low_complexity 1 27 0 1944 169 3 0 chr10 83776668 83776976 -56539789 - AluSq SINE Alu -4 309 1 23 0 0 0 chr10 83776979 83777002 -56539763 + AT_rich Low_complexity Low_complexity 1 23 0 2066 135 0 7 chr10 83777044 83777340 -56539425 - AluSx SINE Alu -18 294 1 2453 154 9 42 chr10 83777348 83777782 -56538983 - L1MC1 LINE L1 0 6333 5914 751 172 45 0 chr10 83778806 83778940 -56537825 - Tigger7 DNA MER2_type 0 2487 2348 691 144 52 39 chr10 83778946 83779099 -56537666 + MER21A LTR ERV1 747 901 -30 21 36 0 0 chr10 83779495 83779523 -56537242 + AT_rich Low_complexity Low_complexity 1 28 0 2197 115 0 0 chr10 83779572 83779876 -56536889 - AluSx SINE Alu -8 304 1 482 66 11 33 chr10 83779904 83779995 -56536770 + (TA)n Simple_repeat Simple_repeat 1 89 0 251 319 42 7 chr10 83780214 83780358 -56536407 + L1ME LINE L1 5528 5676 -445 510 270 152 24 chr10 83781740 83781845 -56534920 - L1MC4 LINE L1 0 8042 7952 351 0 0 0 chr10 83781845 83781884 -56534881 + (CA)n Simple_repeat Simple_repeat 2 40 0 510 270 152 24 chr10 83781884 83782025 -56534740 - L1MC4 LINE L1 -90 7952 7749 2201 105 0 23 chr10 83782025 83782329 -56534436 + AluY SINE Alu 1 297 -14 510 270 152 24 chr10 83782329 83782377 -56534388 - L1MC4 LINE L1 -293 7749 7709 979 144 0 24 chr10 83782384 83782551 -56534214 - AluSg/x SINE Alu -17 293 131 3459 226 120 10 chr10 83783300 83783740 -56533025 + L1MC4 LINE L1 6563 6953 -1089 1824 137 3 27 chr10 83783740 83784039 -56532726 + AluSx SINE Alu 1 292 -20 3459 226 120 10 chr10 83784039 83784603 -56532162 + L1MC4 LINE L1 6953 7678 -364 1045 264 91 29 chr10 83784594 83785311 -56531454 + L1M4 LINE L1 2808 3568 -2578 * 1373 222 80 0 chr10 83785313 83785651 -56531114 + MER47A DNA MER2_type 1 365 -1 1739 150 4 4 chr10 83786003 83786269 -56530496 - AluJb SINE Alu -12 300 35 2548 57 0 0 chr10 83786351 83786652 -56530113 - AluY SINE Alu -10 301 1 24 0 0 0 chr10 83786657 83786681 -56530084 + AT_rich Low_complexity Low_complexity 1 24 0 1647 161 0 69 chr10 83786738 83787055 -56529710 - AluJo SINE Alu -17 295 1 252 0 0 0 chr10 83787059 83787087 -56529678 + (T)n Simple_repeat Simple_repeat 1 28 0 3350 199 156 8 chr10 83787125 83787902 -56528863 + Charlie1a DNA MER1_type 3 894 -561 783 140 53 20 chr10 83787915 83788065 -56528700 - L1MD3 LINE L1 0 7995 7841 1564 164 50 25 chr10 83788065 83788382 -56528383 + Charlie1a DNA MER1_type 881 1205 -250 315 0 0 0 chr10 83788394 83788429 -56528336 + (CA)n Simple_repeat Simple_repeat 2 36 0 1988 130 21 25 chr10 83788441 83788646 -56528119 - L1MA5 LINE L1 -275 6025 5821 1255 178 5 5 chr10 83788646 83788854 -56527911 - MER6B DNA MER2_type -1 209 2 1988 130 21 25 chr10 83788854 83789255 -56527510 - L1MA5 LINE L1 -479 5821 5395 2749 16 0 0 chr10 83789255 83789566 -56527199 - AluYa5 SINE Alu 0 311 1 1988 130 21 25 chr10 83789566 83789917 -56526848 - L1MA5 LINE L1 -905 5395 5044 721 186 79 9 chr10 83789926 83790141 -56526624 + Charlie1a DNA MER1_type 1221 1450 -5 482 222 20 59 chr10 83790109 83790262 -56526503 + MER105 DNA DNA 13 159 -45 * 236 238 0 0 chr10 83790263 83790305 -56526460 - MER105 DNA DNA -162 42 1 218 292 56 14 chr10 83790317 83790389 -56526376 + MIR SINE MIR 188 262 0 367 292 5 19 chr10 83790435 83790644 -56526121 - L1M4 LINE L1 -917 5229 5024 1624 251 99 9 chr10 83790670 83791197 -56525568 + L2 LINE L2 1875 2448 -866 595 57 0 90 chr10 83791198 83791209 -56525556 - L1MA3 LINE L1 -239 6066 6056 2825 115 38 0 chr10 83791209 83791627 -56525138 - MER57B LTR ERV1 0 434 1 595 57 0 90 chr10 83791627 83791737 -56525028 - L1MA3 LINE L1 -249 6056 5956 911 163 0 38 chr10 83791742 83791926 -56524839 - FRAM SINE Alu 0 176 1 551 276 83 93 chr10 83791955 83792174 -56524591 - MLT1L LTR MaLR -77 538 318 2514 45 0 6 chr10 83792174 83792486 -56524279 + AluY SINE Alu 1 310 -1 551 276 83 93 chr10 83792486 83792661 -56524104 - MLT1L LTR MaLR -297 318 148 2148 119 0 0 chr10 83792661 83792963 -56523802 - AluSx SINE Alu -10 302 1 551 276 83 93 chr10 83792963 83793106 -56523659 - MLT1L LTR MaLR -467 148 5 278 315 47 60 chr10 83793358 83793507 -56523258 - MLT1J2 LTR MaLR -37 413 267 539 232 30 26 chr10 83793513 83793709 -56523056 - MLT1J1 LTR MaLR -255 256 21 526 97 0 0 chr10 83794459 83794531 -56522234 - AluJ/FRAM SINE Alu -16 296 225 350 287 105 14 chr10 83794788 83794931 -56521834 - LTR16B LTR ERVL -308 156 1 336 251 210 26 chr10 83795446 83795687 -56521078 - MLT1I LTR MaLR -5 445 136 2523 211 30 28 chr10 83795721 83796257 -56520508 - MER87 LTR ERV1 0 541 5 1109 102 0 0 chr10 83796743 83796890 -56519875 - AluSq/x SINE Alu -166 147 1 432 269 75 60 chr10 83797133 83797246 -56519519 - L1ME LINE L1 -362 5759 5649 1827 136 3 3 chr10 83797246 83797540 -56519225 - AluJo SINE Alu -13 299 6 432 269 75 60 chr10 83797540 83797694 -56519071 - L1ME LINE L1 -472 5649 5488 469 250 15 128 chr10 83798069 83798133 -56518632 - MIR3 SINE MIR -5 203 133 2561 45 3 0 chr10 83798133 83798443 -56518322 - AluY SINE Alu 0 311 1 469 250 15 128 chr10 83798443 83798574 -56518191 - MIR3 SINE MIR -75 133 30 689 189 220 31 chr10 83798686 83798877 -56517888 - MER67B LTR ERV1 -434 227 1 189 74 0 0 chr10 83798967 83798994 -56517771 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 2168 105 0 0 chr10 83798994 83799289 -56517476 - AluSg SINE Alu -15 295 1 378 0 0 0 chr10 83799317 83799359 -56517406 + (TA)n Simple_repeat Simple_repeat 2 43 0 2170 47 57 17 chr10 83799359 83799657 -56517108 - AluY SINE Alu -1 310 1 405 314 48 54 chr10 83799885 83800385 -56516380 - L1ME LINE L1 -1172 4974 4478 1877 155 3 0 chr10 83800506 83800802 -56515963 - AluJb SINE Alu -10 302 6 186 43 0 0 chr10 83801061 83801084 -56515681 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2219 101 0 0 chr10 83801084 83801372 -56515393 - AluSq SINE Alu -22 291 1 368 234 16 8 chr10 83801441 83801565 -56515200 - L1MC4 LINE L1 -1 8041 7917 735 174 20 34 chr10 83801705 83801854 -56514911 - MER58B DNA MER1_type 0 341 195 5911 67 20 15 chr10 83802018 83802974 -56513791 - SVA Other Other -520 866 1 239 285 16 16 chr10 83803141 83803264 -56513501 + G-rich Low_complexity Low_complexity 3 125 0 324 0 0 0 chr10 83803399 83803435 -56513330 + (TG)n Simple_repeat Simple_repeat 2 37 0 1115 225 22 7 chr10 83803435 83803711 -56513054 - MLT2D LTR ERVL -129 285 6 205 316 105 0 chr10 83804516 83804630 -56512135 - L2 LINE L2 -1 3271 3146 236 317 83 7 chr10 83804874 83805019 -56511746 + LTR16C LTR ERVL 247 402 -89 1172 155 63 17 chr10 83805573 83805812 -56510953 + L1MB7 LINE L1 5916 6165 -19 2549 198 24 15 chr10 83806026 83806567 -56510198 + MER74A LTR ERVL 1 546 -12 293 357 147 6 chr10 83806668 83806982 -56509783 + L2 LINE L2 2898 3255 -17 1263 126 5 29 chr10 83806988 83807195 -56509570 - AluJo SINE Alu -29 283 82 303 152 0 51 chr10 83807225 83807304 -56509461 + AluS SINE Alu 2 76 -227 337 190 40 10 chr10 83807524 83807624 -56509141 - L1MC5 LINE L1 -31 7930 7828 292 215 65 54 chr10 83809697 83809790 -56506975 + MER21B LTR ERV1 3 96 -767 3500 207 87 18 chr10 83809796 83810568 -56506197 + MER21B LTR ERV1 19 843 -20 331 274 124 58 chr10 83810664 83811026 -56505739 + LTR33 LTR ERVL 75 460 -61 1786 147 7 13 chr10 83811983 83812282 -56504483 + AluJb SINE Alu 1 297 -15 42 20 0 0 chr10 83812285 83812334 -56504431 + AT_rich Low_complexity Low_complexity 1 49 0 1681 130 11 14 chr10 83812823 83813107 -56503658 + AluSq SINE Alu 1 283 -30 1009 153 18 0 chr10 83813788 83813958 -56502807 + AluSg/x SINE Alu 138 310 0 219 288 9 90 chr10 83814431 83814464 -56502301 + MIR SINE MIR 108 142 -120 2195 195 33 13 chr10 83814464 83814916 -56501849 + LOR1b LTR ERV1 1 461 0 219 288 9 90 chr10 83814916 83814993 -56501772 + MIR SINE MIR 142 209 -53 2200 164 0 5 chr10 83814993 83815370 -56501395 + L1PA16 LINE L1 5792 6166 0 1992 111 7 0 chr10 83815371 83815686 -56501079 + AluSp SINE Alu 1 317 0 709 70 122 0 chr10 83815697 83815812 -56500953 + AluSg/x SINE Alu 184 312 0 4610 133 121 87 chr10 83815824 83817255 -56499510 - pTR5 LTR ERV1 -2 2436 743 2187 78 31 3 chr10 83817335 83817629 -56499136 + AluSx SINE Alu 1 302 -10 449 242 65 77 chr10 83817988 83818236 -56498529 - HAL1 LINE L1 -112 2395 2151 279 219 21 13 chr10 83818275 83818384 -56498381 + HsTC2 DNA Tc2 6 1836 -62 2254 264 99 38 chr10 83818719 83819268 -56497497 - HAL1 LINE L1 -749 1758 1244 2128 95 10 7 chr10 83819268 83819563 -56497202 - AluSx SINE Alu -16 296 1 2254 264 99 38 chr10 83819563 83820122 -56496643 - HAL1 LINE L1 -1263 1244 582 322 261 203 26 chr10 83820644 83820797 -56495968 - HAL1 LINE L1 -1921 586 407 707 220 66 37 chr10 83821192 83821465 -56495300 - MLT1B LTR MaLR 0 390 110 1431 148 48 31 chr10 83821648 83821938 -56494827 - MLT1B LTR MaLR -95 295 1 2172 160 73 3 chr10 83822621 83822977 -56493788 + MER72 LTR ERV1 14 394 -328 1179 170 5 19 chr10 83822965 83823177 -56493588 + MER72 LTR ERV1 514 722 0 * 255 383 16 16 chr10 83823218 83823346 -56493419 + L2 LINE L2 3145 3272 0 184 345 111 33 chr10 83824159 83824823 -56491942 + L2 LINE L2 2245 2960 -354 204 294 0 82 chr10 83825027 83825072 -56491693 - L3 LINE CR1 -3 1574 1538 1478 198 0 0 chr10 83825072 83825345 -56491420 + AluJo SINE Alu 35 307 -5 204 294 0 82 chr10 83825345 83825384 -56491381 - L3 LINE CR1 -39 1538 1497 272 200 0 0 chr10 83825397 83825447 -56491318 - MLT1H1 LTR MaLR -4 538 489 1121 45 0 0 chr10 83825447 83825579 -56491186 + AluY SINE Alu 1 132 -179 2436 66 0 0 chr10 83825583 83825885 -56490880 + AluY SINE Alu 1 302 -9 1042 251 81 63 chr10 83825885 83826244 -56490521 - MLT1H1 LTR MaLR -42 513 141 1937 145 3 0 chr10 83826244 83826541 -56490224 + AluSx SINE Alu 3 300 -12 1042 251 81 63 chr10 83826541 83826685 -56490080 - MLT1H1 LTR MaLR -414 141 1 1477 84 51 103 chr10 83827556 83827829 -56488936 - AluSx SINE Alu -52 260 2 392 294 0 0 chr10 83827856 83827958 -56488807 - AluSp/q SINE Alu -2 301 200 511 224 42 75 chr10 83827979 83828193 -56488572 + MLT1J LTR MaLR 230 436 -75 911 163 0 38 chr10 83828218 83828402 -56488363 + FRAM SINE Alu 1 176 0 595 57 0 90 chr10 83828407 83828517 -56488248 + L1MA3 LINE L1 5956 6056 -249 2825 115 38 0 chr10 83828517 83828935 -56487830 + MER57B LTR ERV1 1 434 0 595 57 0 90 chr10 83828935 83828946 -56487819 + L1MA3 LINE L1 6056 6066 -239 1624 251 99 9 chr10 83828947 83829474 -56487291 - L2 LINE L2 -866 2448 1875 367 292 5 19 chr10 83829500 83829709 -56487056 + L1M4 LINE L1 5024 5229 -917 218 292 56 14 chr10 83829755 83829827 -56486938 - MIR SINE MIR 0 262 188 236 238 0 0 chr10 83829839 83829881 -56486884 + MER105 DNA DNA 1 42 -162 482 222 20 59 chr10 83829882 83830035 -56486730 - MER105 DNA DNA -45 159 13 * 721 186 79 9 chr10 83830003 83830218 -56486547 - Charlie1a DNA MER1_type -5 1450 1221 4208 128 15 25 chr10 83830227 83830578 -56486187 + L1MA8 LINE L1 5044 5397 -894 2749 16 0 0 chr10 83830578 83830889 -56485876 + AluYa5 SINE Alu 1 311 0 4208 128 15 25 chr10 83830889 83831290 -56485475 + L1MA8 LINE L1 5397 5790 -501 1171 178 5 5 chr10 83831290 83831498 -56485267 + MER6B DNA MER2_type 2 209 -1 4208 128 15 25 chr10 83831498 83831653 -56485112 + L1MA8 LINE L1 5790 5945 -346 315 0 0 0 chr10 83831715 83831750 -56485015 + (TG)n Simple_repeat Simple_repeat 2 36 0 1516 164 50 25 chr10 83831762 83832079 -56484686 - Charlie1a DNA MER1_type -250 1205 881 758 140 53 20 chr10 83832079 83832229 -56484536 + L1MD3 LINE L1 7841 7995 0 3246 199 156 8 chr10 83832242 83833019 -56483746 - Charlie1a DNA MER1_type -561 894 3 252 0 0 0 chr10 83833057 83833085 -56483680 + (A)n Simple_repeat Simple_repeat 1 28 0 1539 164 0 69 chr10 83833089 83833406 -56483359 + AluJo SINE Alu 1 295 -17 24 0 0 0 chr10 83833463 83833487 -56483278 + AT_rich Low_complexity Low_complexity 1 24 0 2438 57 0 0 chr10 83833492 83833793 -56482972 + AluY SINE Alu 1 301 -10 1644 150 4 4 chr10 83833875 83834141 -56482624 + AluJb SINE Alu 35 300 -12 841 299 109 15 chr10 83834493 83834831 -56481934 + L1M4 LINE L1 3034 3403 -2743 317 212 45 0 chr10 83834846 83834912 -56481853 + L1M4 LINE L1 5058 5126 -1020 * 387 171 8 122 chr10 83834908 83834974 -56481791 + L1MB7 LINE L1 6076 6124 -60 1291 183 3 82 chr10 83834974 83835303 -56481462 + AluSx SINE Alu 1 305 0 387 171 8 122 chr10 83835303 83835358 -56481407 + L1MB7 LINE L1 6124 6184 0 7146 224 72 23 chr10 83835369 83837672 -56479093 + L1M4 LINE L1 2564 4980 -1166 515 267 0 0 chr10 83837995 83838096 -56478669 + MER81 DNA DNA 1 101 -13 1759 156 74 61 chr10 83838671 83838751 -56478014 + MLT2C1 LTR ERVL 1 78 -319 2431 53 20 0 chr10 83838751 83839051 -56477714 - AluY SINE Alu -5 306 1 1759 156 74 61 chr10 83839051 83839320 -56477445 + MLT2C1 LTR ERVL 78 358 -39 192 77 0 0 chr10 83839320 83839346 -56477419 + (CA)n Simple_repeat Simple_repeat 1 26 0 1759 156 74 61 chr10 83839346 83839387 -56477378 + MLT2C1 LTR ERVL 358 397 0 311 280 76 107 chr10 83839704 83839929 -56476836 - MIR SINE MIR -8 254 37 180 281 0 18 chr10 83840375 83840432 -56476333 + MIR3 SINE MIR 100 155 -53 2196 108 0 7 chr10 83840561 83840867 -56475898 + AluSq SINE Alu 1 304 -9 300 111 0 0 chr10 83840870 83840915 -56475850 + (GA)n Simple_repeat Simple_repeat 2 46 0 185 292 112 11 chr10 83841481 83841570 -56475195 + MIR3 SINE MIR 1 98 -110 1383 206 53 36 chr10 83841603 83841962 -56474803 + MLT1A2 LTR MaLR 10 374 0 785 297 86 38 chr10 83842057 83842425 -56474340 - L1MC/D LINE L1 -743 5403 5126 2404 68 0 7 chr10 83842425 83842732 -56474033 + AluY SINE Alu 1 305 -6 785 297 86 38 chr10 83842732 83842855 -56473910 - L1MC/D LINE L1 -1020 5126 5010 248 286 220 0 chr10 83842935 83843047 -56473718 + MIR SINE MIR 17 151 -65 439 163 131 69 chr10 83843052 83843168 -56473597 + MER104 DNA Tc2 7 137 -1761 2312 80 0 3 chr10 83843168 83843467 -56473298 - AluY SINE Alu -13 298 1 439 163 131 69 chr10 83843467 83843510 -56473255 + MER104 DNA Tc2 137 176 -4 183 27 54 27 chr10 83843778 83843815 -56472950 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 238 300 45 64 chr10 83844168 83844278 -56472487 - MIR SINE MIR -47 215 108 378 0 0 0 chr10 83844533 83844575 -56472190 + (CA)n Simple_repeat Simple_repeat 1 42 0 2062 113 10 0 chr10 83845315 83845608 -56471157 + AluSx SINE Alu 1 296 -16 2318 70 0 7 chr10 83846952 83847252 -56469513 + AluY SINE Alu 1 298 -13 1941 149 0 10 chr10 83847437 83847797 -56468968 + AluJb SINE Alu 7 363 0 210 386 26 9 chr10 83848084 83848198 -56468567 - L2 LINE L2 -35 3237 3122 572 222 8 17 chr10 83848214 83848453 -56468312 + GA-rich Low_complexity Low_complexity 1 237 0 1209 196 4 33 chr10 83848460 83848705 -56468060 + L1MB5 LINE L1 5937 6174 0 288 264 154 16 chr10 83848705 83848887 -56467878 - L2 LINE L2 -157 3156 2950 4135 112 147 138 chr10 83849322 83850698 -56466067 - pTR5 LTR ERV1 0 2438 742 2128 122 7 0 chr10 83851083 83851387 -56465378 + AluSx SINE Alu 1 306 -6 989 279 17 17 chr10 83852585 83852879 -56463886 + MER41E LTR ERV1 219 512 0 213 238 0 0 chr10 83853070 83853112 -56463653 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 287 257 0 40 chr10 83853214 83853288 -56463477 + MIR SINE MIR 81 151 -57 204 405 34 0 chr10 83856590 83856679 -56460086 - MIR SINE MIR -59 149 58 6128 28 6 7 chr10 83858205 83858911 -56457854 - SVA Other Other -5 1381 677 201 364 0 30 chr10 83858924 83859056 -56457709 + CT-rich Low_complexity Low_complexity 5 132 0 355 320 10 22 chr10 83859349 83859541 -56457224 + CT-rich Low_complexity Low_complexity 1 189 0 265 316 13 0 chr10 83859574 83859653 -56457112 + C-rich Low_complexity Low_complexity 1 80 0 * 287 333 6 23 chr10 83859634 83859805 -56456960 + CT-rich Low_complexity Low_complexity 2 169 0 268 40 120 0 chr10 83859864 83859914 -56456851 + GA-rich Low_complexity Low_complexity 6 61 0 377 315 68 18 chr10 83860676 83860895 -56455870 + L1MC4a LINE L1 4317 4546 -1600 931 214 173 7 chr10 83860938 83861362 -56455403 + MLT1F1 LTR MaLR 1 565 -2 324 392 54 31 chr10 83861809 83862031 -56454734 + L1MC4a LINE L1 5683 5909 -1899 28 61 0 0 chr10 83862323 83862372 -56454393 + AT_rich Low_complexity Low_complexity 1 49 0 1834 99 107 0 chr10 83862964 83863236 -56453529 + AluSg SINE Alu 1 301 -9 367 253 180 0 chr10 83864310 83864440 -56452325 - MIR SINE MIR -70 192 41 463 277 175 48 chr10 83864840 83865165 -56451600 + MLT1J2 LTR MaLR 1 386 -64 2368 85 0 0 chr10 83865165 83865472 -56451293 - AluY SINE Alu -4 307 1 463 277 175 48 chr10 83865472 83865540 -56451225 + MLT1J2 LTR MaLR 386 444 -6 409 181 40 114 chr10 83865552 83865641 -56451124 - MER5A DNA MER1_type -30 159 84 2144 113 0 3 chr10 83865641 83865941 -56450824 - AluSq SINE Alu -14 299 1 409 181 40 114 chr10 83865941 83866000 -56450765 - MER5A DNA MER1_type -105 84 22 298 277 66 1 chr10 83866218 83866322 -56450443 + MIR SINE MIR 37 146 -67 2206 114 0 0 chr10 83867548 83867856 -56448909 + AluSq SINE Alu 1 308 -5 841 229 117 11 chr10 83867856 83868214 -56448551 + LTR37A LTR ERV1 31 426 0 296 254 79 53 chr10 83868226 83868415 -56448350 - L3 LINE CR1 -3 1574 1381 204 344 11 21 chr10 83869373 83869466 -56447299 - MIR SINE MIR -13 249 158 1884 18 0 9 chr10 83869561 83869781 -56446984 + AluY SINE Alu 83 300 -11 521 228 68 25 chr10 83870159 83870321 -56446444 + MLT1K LTR MaLR 398 566 -22 2087 120 10 0 chr10 83870659 83870960 -56445805 - AluSx SINE Alu -8 304 1 1477 67 72 5 chr10 83871258 83871466 -56445299 - AluY SINE Alu -8 303 82 2027 151 17 82 chr10 83877619 83878036 -56438729 + MLT1B LTR MaLR 1 390 0 2303 173 6 3 chr10 83878085 83878449 -56438316 - MLT1A1 LTR MaLR 0 365 1 1297 203 125 3 chr10 83879331 83879627 -56437138 - MER58B DNA MER1_type 0 341 10 1749 149 3 14 chr10 83879991 83880286 -56436479 + AluJb SINE Alu 1 292 -20 261 0 0 0 chr10 83880289 83880318 -56436447 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1266 125 0 0 chr10 83880324 83880508 -56436257 + AluSg/x SINE Alu 129 312 0 636 246 0 8 chr10 83881240 83881374 -56435391 + FLAM_A SINE Alu 1 133 0 674 96 10 0 chr10 83881375 83881479 -56435286 + (GA)n Simple_repeat Simple_repeat 1 105 0 2362 84 0 0 chr10 83882288 83882598 -56434167 - AluY SINE Alu -1 310 1 253 315 41 34 chr10 83884310 83884456 -56432309 - MIR SINE MIR -37 225 79 2472 54 0 10 chr10 83884773 83885087 -56431678 + AluY SINE Alu 1 311 0 512 204 130 43 chr10 83886425 83886587 -56430178 + MER3 DNA MER1_type 1 129 -80 2226 158 150 15 chr10 83886620 83886920 -56429845 + LTR24B LTR ERV1 41 299 -277 1830 127 14 4 chr10 83886920 83887196 -56429569 + AluSx SINE Alu 3 281 -31 2226 158 150 15 chr10 83887196 83887362 -56429403 + LTR24B LTR ERV1 299 570 -6 222 304 184 8 chr10 83889670 83889795 -56426970 - MIR3 SINE MIR -55 153 7 * 323 352 19 0 chr10 83889787 83889892 -56426873 - L2 LINE L2 0 3313 3207 922 305 149 27 chr10 83890060 83891318 -56425447 + L2 LINE L2 1868 3285 -28 1093 164 79 86 chr10 83891778 83892082 -56424683 + AluJo SINE Alu 1 302 0 2309 90 3 66 chr10 83892541 83892875 -56423890 + AluSp SINE Alu 1 313 0 192 326 0 65 chr10 83893023 83893115 -56423650 - MIR SINE MIR -62 146 61 374 344 0 16 chr10 83893479 83893604 -56423161 - MIR3 SINE MIR -49 159 37 237 359 99 6 chr10 83894283 83894464 -56422301 + MIR SINE MIR 47 244 -18 296 216 155 35 chr10 83894751 83894867 -56421898 + MIR SINE MIR 16 145 -63 191 257 148 20 chr10 83895178 83895279 -56421486 - MIR3 SINE MIR -16 192 79 1216 187 24 0 chr10 83895633 83895842 -56420923 - MER58A DNA MER1_type 0 224 11 458 229 57 7 chr10 83896006 83896146 -56420619 + L1ME1 LINE L1 5764 5910 -260 740 296 107 10 chr10 83896170 83896785 -56419980 + L1MEc LINE L1 790 1464 -4932 572 194 117 129 chr10 83896852 83897022 -56419743 + L1MEc LINE L1 3024 3192 -3023 401 136 57 0 chr10 83897022 83897110 -56419655 + L1MB3 LINE L1 6090 6182 -1 572 194 117 129 chr10 83897110 83897187 -56419578 + L1MEc LINE L1 3192 3268 -2947 573 267 56 29 chr10 83897214 83897441 -56419324 + L1ME1 LINE L1 5946 6334 0 429 70 0 0 chr10 83897799 83897856 -56418909 + (CA)n Simple_repeat Simple_repeat 2 58 0 402 225 59 113 chr10 83897879 83898101 -56418664 + L1ME LINE L1 5545 5754 -367 293 323 42 0 chr10 83898514 83898610 -56418155 + L3 LINE CR1 1344 1443 -134 361 261 69 46 chr10 83898732 83898862 -56417903 - MER94 DNA DNA -1 133 1 22 0 0 0 chr10 83899041 83899063 -56417702 + AT_rich Low_complexity Low_complexity 1 22 0 3372 158 26 14 chr10 83899395 83900015 -56416750 - L1MB3 LINE L1 -142 6041 5415 2631 41 0 0 chr10 83900364 83900657 -56416108 - AluY SINE Alu -18 293 1 810 296 120 35 chr10 83902326 83902869 -56413896 + L2 LINE L2 1609 2197 -1117 634 287 57 14 chr10 83903045 83903410 -56413355 + L2 LINE L2 2709 3088 -225 239 299 37 37 chr10 83903450 83903557 -56413208 + L2 LINE L2 3196 3302 -11 264 311 53 45 chr10 83903709 83903841 -56412924 + L2 LINE L2 3138 3270 -2 329 316 121 15 chr10 83904210 83904416 -56412349 - MIR SINE MIR -15 247 20 248 275 125 8 chr10 83905742 83905862 -56410903 + MER5A DNA MER1_type 19 152 -37 663 132 0 97 chr10 83906107 83906251 -56410514 - FLAM_C SINE Alu -12 131 2 1273 158 31 14 chr10 83908660 83908882 -56407883 + AluJb SINE Alu 87 312 0 1850 154 10 7 chr10 83908938 83909231 -56407534 - AluSx SINE Alu -18 294 1 2499 87 3 0 chr10 83910159 83910471 -56406294 + AluSq SINE Alu 1 313 0 263 223 43 64 chr10 83910499 83910593 -56406172 + MER112 DNA MER1_type 1 92 -168 2358 95 0 3 chr10 83910606 83910902 -56405863 + AluSx SINE Alu 1 295 -17 344 276 92 25 chr10 83910958 83911121 -56405644 - HAL1 LINE L1 0 2507 2334 1937 74 0 0 chr10 83911141 83911370 -56405395 + AluY SINE Alu 1 229 -82 924 127 49 0 chr10 83911371 83911513 -56405252 + AluSp SINE Alu 97 245 -68 677 297 110 28 chr10 83911513 83911941 -56404824 - HAL1 LINE L1 -185 2322 1860 1082 184 5 0 chr10 83912060 83912250 -56404515 - AluSx SINE Alu -1 311 121 4748 38 0 0 chr10 83912250 83912833 -56403932 - L1PA3 LINE L1 0 6155 5573 10796 21 0 0 chr10 83912833 83914319 -56402446 + L1PA3 LINE L1 4086 5571 -584 908 105 0 0 chr10 83914319 83914433 -56402332 - AluSx SINE Alu -177 135 22 1353 273 86 19 chr10 83914434 83915385 -56401380 - HAL1 LINE L1 -882 1625 579 453 275 42 12 chr10 83915651 83915818 -56400947 - HAL1 LINE L1 -2333 174 3 1607 189 113 44 chr10 83915915 83916365 -56400400 + MLT1E2 LTR MaLR 75 555 -71 1102 182 132 47 chr10 83916371 83916446 -56400319 - MER2 DNA MER2_type 0 345 278 183 42 0 0 chr10 83916446 83916470 -56400295 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1102 182 132 47 chr10 83916470 83916497 -56400268 - MER2 DNA MER2_type -67 278 255 2499 56 0 0 chr10 83916497 83916784 -56399981 + AluY SINE Alu 19 305 -6 1102 182 132 47 chr10 83916784 83916809 -56399956 - MER2 DNA MER2_type -90 255 234 1863 163 10 3 chr10 83916809 83917104 -56399661 - AluJb SINE Alu -15 297 1 1102 182 132 47 chr10 83917104 83917292 -56399473 - MER2 DNA MER2_type -111 234 1 2263 113 0 0 chr10 83917309 83917602 -56399163 + AluSg1 SINE Alu 1 293 -16 1247 204 5 0 chr10 83917698 83917909 -56398856 - AluJb SINE Alu -100 212 1 200 59 29 0 chr10 83918708 83918742 -56398023 + (TCCCC)n Simple_repeat Simple_repeat 3 37 0 29 28 0 0 chr10 83919500 83919536 -56397229 + AT_rich Low_complexity Low_complexity 1 36 0 2153 208 34 51 chr10 83920366 83920976 -56395789 + L1MC4 LINE L1 6951 7550 -492 1244 157 157 8 chr10 83921065 83921326 -56395439 - AluJo SINE Alu -1 301 2 318 222 14 28 chr10 83922771 83922843 -56393922 - MER2 DNA MER2_type -2 343 273 2054 131 24 0 chr10 83922843 83923133 -56393632 + AluSx SINE Alu 1 297 -15 686 71 0 0 chr10 83923157 83923255 -56393510 - MER2 DNA MER2_type -155 190 93 550 174 174 20 chr10 83924363 83924512 -56392253 + AluSg/x SINE Alu 135 306 -3 308 198 19 113 chr10 83924552 83924658 -56392107 - MER5A DNA MER1_type -84 105 10 1565 156 17 10 chr10 83925887 83926175 -56390590 + MER49 LTR ERV1 1 290 -633 1467 218 35 14 chr10 83926209 83926557 -56390208 + MER4D LTR ERV1 549 903 0 1665 197 0 23 chr10 83926662 83926967 -56389798 + AluJo SINE Alu 1 298 -14 503 310 103 10 chr10 83929472 83929762 -56387003 + L1MC4a LINE L1 5621 5937 -1871 279 79 0 0 chr10 83930836 83930874 -56385891 + (CACCC)n Simple_repeat Simple_repeat 5 42 0 1463 156 0 4 chr10 83931076 83931307 -56385458 + AluJo SINE Alu 69 298 -14 1534 183 90 50 chr10 83932727 83933192 -56383573 + MER31A LTR ERV1 1 484 -1 211 139 0 23 chr10 83933973 83934016 -56382749 + (CAACC)n Simple_repeat Simple_repeat 2 43 0 192 221 26 104 chr10 83934145 83934222 -56382543 - MIR SINE MIR -76 186 116 658 259 119 10 chr10 83935250 83935451 -56381314 + MLT1I LTR MaLR 187 409 0 2421 88 0 10 chr10 83935733 83936039 -56380726 + AluSx SINE Alu 1 303 -9 423 242 30 38 chr10 83936051 83936131 -56380634 + MIR SINE MIR 84 164 -98 2394 110 3 0 chr10 83936131 83936441 -56380324 - AluSq SINE Alu -2 311 1 423 242 30 38 chr10 83936441 83936492 -56380273 + MIR SINE MIR 164 214 -48 523 148 0 0 chr10 83937349 83937430 -56379335 + AluJ/FLAM SINE Alu 7 87 -225 24 85 0 0 chr10 83938637 83938696 -56378069 + GC_rich Low_complexity Low_complexity 1 59 0 21 57 0 0 chr10 83938760 83938795 -56377970 + GC_rich Low_complexity Low_complexity 1 35 0 1577 161 68 29 chr10 83939561 83939841 -56376924 - AluJo SINE Alu -21 291 1 1502 300 178 15 chr10 83939923 83941173 -56375592 - L2 LINE L2 -1 3312 1851 1094 264 137 13 chr10 83941268 83941715 -56375050 + MLT1J LTR MaLR 3 504 -7 190 250 52 31 chr10 83941735 83941831 -56374934 - L2 LINE L2 -1610 1704 1607 614 163 284 7 chr10 83942266 83942407 -56374358 - AluJb SINE Alu -12 300 121 492 338 6 14 chr10 83942736 83943083 -56373682 + G-rich Low_complexity Low_complexity 1 343 0 1447 129 0 32 chr10 83943084 83943332 -56373433 - L1MB7 LINE L1 -331 6351 6112 1738 157 50 56 chr10 83943332 83943541 -56373224 - MSTC LTR MaLR 0 428 220 2020 116 24 0 chr10 83943541 83943835 -56372930 - AluSx SINE Alu -11 301 1 1738 157 50 56 chr10 83943835 83944002 -56372763 - MSTC LTR MaLR -208 220 54 8106 198 28 19 chr10 83944002 83944751 -56372014 - L1MB7 LINE L1 -609 6073 5332 1556 188 3 20 chr10 83944751 83945054 -56371711 - AluSx SINE Alu -14 298 1 8106 198 28 19 chr10 83945054 83945841 -56370924 - L1MB7 LINE L1 -1350 5332 4522 1593 185 0 13 chr10 83945841 83946139 -56370626 - AluJb SINE Alu -8 304 11 8106 198 28 19 chr10 83946139 83946696 -56370069 - L1MB7 LINE L1 -2160 4522 3972 740 213 19 0 chr10 83946708 83946863 -56369902 - L1MB7 LINE L1 -6379 163 6 42 0 0 0 chr10 83947060 83947102 -56369663 + AT_rich Low_complexity Low_complexity 1 42 0 1308 173 100 67 chr10 83948939 83949269 -56367496 - MER2 DNA MER2_type -3 341 1 198 243 0 0 chr10 83949276 83949313 -56367452 - L2 LINE L2 -23 3290 3254 2148 102 0 0 chr10 83949420 83949738 -56367027 + AluSx SINE Alu 1 318 0 458 158 189 18 chr10 83950114 83950262 -56366503 + MIR SINE MIR 20 192 -62 335 304 137 6 chr10 83952058 83952219 -56364546 - MIR SINE MIR 0 262 81 288 0 0 0 chr10 83952558 83952590 -56364175 + (TG)n Simple_repeat Simple_repeat 1 32 0 225 324 70 35 chr10 83952646 83952788 -56363977 - L2 LINE L2 -508 2806 2660 181 293 104 19 chr10 83953218 83953324 -56363441 + L2 LINE L2 2947 3061 -211 361 233 121 43 chr10 83953538 83953654 -56363111 - L2 LINE L2 -2 3311 3187 1724 166 0 7 chr10 83954215 83954505 -56362260 + AluJb SINE Alu 1 288 -24 397 264 0 11 chr10 83954756 83954843 -56361922 + MIR3 SINE MIR 92 177 -31 645 292 24 24 chr10 83954934 83955143 -56361622 + MIR SINE MIR 20 228 -34 360 78 219 16 chr10 83955472 83955536 -56361229 + MADE1 DNA Mariner 1 77 -3 225 307 58 29 chr10 83955855 83955992 -56360773 + MIR3 SINE MIR 9 149 -59 452 307 83 40 chr10 83956727 83956828 -56359937 - L1MC4a LINE L1 -1677 6131 6036 2325 90 0 0 chr10 83956828 83957129 -56359636 - AluY SINE Alu -10 301 1 452 307 83 40 chr10 83957129 83957353 -56359412 - L1MC4a LINE L1 -1772 6036 5792 301 249 92 32 chr10 83957370 83957541 -56359224 - L1MC4a LINE L1 -823 5323 5139 2159 112 0 13 chr10 83957541 83957855 -56358910 - AluSx SINE Alu -2 310 1 301 249 92 32 chr10 83957855 83957868 -56358897 - L1MC4a LINE L1 -1007 5139 5128 611 135 6 159 chr10 83958318 83958397 -56358368 + MER63 DNA MER1_type 894 935 -125 2074 84 7 14 chr10 83958397 83958684 -56358081 - AluSx SINE Alu -27 285 1 611 135 6 159 chr10 83958684 83958774 -56357991 + MER63 DNA MER1_type 935 1037 -23 369 234 169 36 chr10 83958828 83959135 -56357630 + L1ME4a LINE L1 5616 5963 -158 1449 91 0 0 chr10 83959947 83960134 -56356631 - AluSg/x SINE Alu -26 286 100 433 39 0 0 chr10 83960390 83960442 -56356323 - AluY SINE Alu -265 53 2 180 237 0 43 chr10 83961393 83961486 -56355279 + CT-rich Low_complexity Low_complexity 5 93 0 205 273 30 15 chr10 83962007 83962073 -56354692 + L2 LINE L2 3245 3311 -2 575 313 103 17 chr10 83962144 83962492 -56354273 + L2 LINE L2 2855 3232 -81 764 274 69 58 chr10 83962849 83963005 -56353760 - MLT1I LTR MaLR -21 388 226 2140 114 0 13 chr10 83963005 83963321 -56353444 + AluSq SINE Alu 1 312 -1 764 274 69 58 chr10 83963321 83963438 -56353327 - MLT1I LTR MaLR -183 226 112 340 257 108 65 chr10 83964477 83964691 -56352074 - MLT1H LTR MaLR -164 385 163 218 320 196 0 chr10 83965011 83965108 -56351657 + MIR SINE MIR 72 187 -75 238 315 104 100 chr10 83966117 83966246 -56350519 + L3 LINE CR1 1199 1331 -246 2353 156 70 0 chr10 83966246 83966643 -56350122 - MSTB LTR MaLR 0 426 2 238 315 104 100 chr10 83966643 83966754 -56350011 + L3 LINE CR1 1331 1440 -137 335 308 19 0 chr10 83967380 83967487 -56349278 - MIR SINE MIR -68 140 32 400 284 10 0 chr10 83967957 83968059 -56348706 + MIR SINE MIR 139 241 -21 225 308 19 39 chr10 83968873 83968977 -56347788 - MIR SINE MIR -5 257 156 995 302 0 4 chr10 83968979 83969234 -56347531 - MIR SINE MIR 0 262 9 314 330 11 0 chr10 83969660 83969751 -56347014 - L2 LINE L2 -51 3262 3171 1128 295 91 34 chr10 83969752 83970257 -56346508 - MLT1K LTR MaLR -42 546 13 186 338 88 0 chr10 83970278 83970346 -56346419 - L2 LINE L2 -81 3191 3118 2156 145 92 22 chr10 83972242 83972642 -56344123 + MSTA LTR MaLR 1 428 0 795 282 24 15 chr10 83972731 83972959 -56343806 + MIR SINE MIR 31 258 -4 402 275 55 0 chr10 83972985 83973094 -56343671 - L2 LINE L2 -4 3309 3195 919 161 151 0 chr10 83973244 83973430 -56343335 + MER20 DNA MER1_type 2 215 -4 1296 94 0 0 chr10 83973970 83974140 -56342625 - AluSg SINE Alu -140 170 1 1222 219 55 63 chr10 83974978 83975025 -56341740 - MLT1A1 LTR MaLR -2 363 317 2176 104 3 0 chr10 83975025 83975334 -56341431 - AluSx SINE Alu -2 310 1 1222 219 55 63 chr10 83975334 83975652 -56341113 - MLT1A1 LTR MaLR -48 317 1 315 337 61 6 chr10 83975861 83976024 -56340741 - L1ME1 LINE L1 -270 5896 5725 384 301 26 9 chr10 83976702 83976815 -56339950 + MER5B DNA MER1_type 8 122 -56 30 0 0 0 chr10 83976980 83977010 -56339755 + AT_rich Low_complexity Low_complexity 1 30 0 1216 215 67 39 chr10 83977424 83977680 -56339085 + MER2 DNA MER2_type 6 274 -71 2128 118 3 6 chr10 83977680 83977993 -56338772 - AluSx SINE Alu 0 312 1 1216 215 67 39 chr10 83977993 83978066 -56338699 + MER2 DNA MER2_type 274 344 -1 326 306 94 6 chr10 83978341 83978521 -56338244 - HAL1 LINE L1 -863 1644 1449 301 252 87 9 chr10 83978568 83978683 -56338082 - L1MEd LINE L1 -4919 1200 1077 374 216 12 161 chr10 83978961 83979123 -56337642 + MIR3 SINE MIR 15 152 -56 180 316 99 41 chr10 83979399 83979570 -56337195 + L2 LINE L2 2717 2897 -417 321 324 37 0 chr10 83979802 83979910 -56336855 + L2 LINE L2 3201 3312 -1 1996 135 72 26 chr10 83980311 83980659 -56336106 + THE1B LTR MaLR 1 364 0 2356 134 52 45 chr10 83980826 83980865 -56335900 - MSTA LTR MaLR 0 428 391 2252 103 0 13 chr10 83980865 83981177 -56335588 + AluSg SINE Alu 1 308 -2 2356 134 52 45 chr10 83981177 83981562 -56335203 - MSTA LTR MaLR -37 391 1 500 300 17 67 chr10 83981807 83982047 -56334718 - MIR SINE MIR -11 251 24 903 293 85 6 chr10 83982085 83982416 -56334349 - LTR16B LTR ERVL 0 464 108 208 327 0 0 chr10 83982788 83982840 -56333925 + MER91 DNA MER1_type 137 188 -2 232 196 59 0 chr10 83983138 83983189 -56333576 + L1MA8 LINE L1 5483 5536 -776 4005 104 25 68 chr10 83983209 83983381 -56333384 + L1MA8 LINE L1 5596 5774 -517 1748 167 3 3 chr10 83983381 83983668 -56333097 - AluJo SINE Alu -25 287 1 4005 104 25 68 chr10 83983668 83984058 -56332707 + L1MA8 LINE L1 5774 6123 -168 1299 192 35 92 chr10 83984058 83984375 -56332390 - AluJo SINE Alu -3 299 1 4005 104 25 68 chr10 83984375 83984533 -56332232 + L1MA8 LINE L1 6123 6286 -5 401 297 45 13 chr10 83987093 83987248 -56329517 + MIR SINE MIR 53 212 -50 246 316 20 0 chr10 83987809 83987907 -56328858 - MIR SINE MIR -17 245 146 31461 59 6 7 chr10 83987914 83993631 -56323134 - L1PA6 LINE L1 0 6154 442 184 196 87 0 chr10 83993631 83993677 -56323088 - MIR SINE MIR -96 166 117 256 227 61 15 chr10 83993775 83993841 -56322924 + L3 LINE CR1 1405 1473 -104 1104 145 0 0 chr10 83994230 83994382 -56322383 - FRAM SINE Alu -24 152 1 412 338 79 13 chr10 83994461 83994689 -56322076 + MIR SINE MIR 20 262 0 1207 281 56 7 chr10 83994694 83995256 -56321509 - L1ME3 LINE L1 -295 5867 5272 368 283 68 85 chr10 83995286 83995579 -56321186 - HAL1 LINE L1 -1382 1125 838 293 277 0 0 chr10 83996537 83996602 -56320163 + L2 LINE L2 3208 3272 0 194 275 12 75 chr10 83997191 83997271 -56319494 + MIR SINE MIR 7 81 -181 243 378 0 0 chr10 83998088 83998178 -56318587 + MIR SINE MIR 36 125 -83 346 281 13 72 chr10 83999159 83999312 -56317453 - MIR SINE MIR -34 228 85 397 272 0 0 chr10 83999406 83999509 -56317256 - MER5A DNA MER1_type -80 109 7 1406 171 175 0 chr10 83999523 83999803 -56316962 + MER58B DNA MER1_type 1 329 -12 3354 101 12 4 chr10 84000620 84001107 -56315658 - L1MB3 LINE L1 -7 6176 5686 321 289 41 10 chr10 84001257 84001354 -56315411 + MER90 LTR ERV1 469 568 -7 3542 163 15 9 chr10 84001727 84002790 -56313975 - L1M2 LINE L1 -554 5737 4672 689 208 0 8 chr10 84002941 84003071 -56313694 + AluJb SINE Alu 125 253 -59 211 220 18 48 chr10 84003442 84003610 -56313155 + CT-rich Low_complexity Low_complexity 2 164 0 * 377 230 20 20 chr10 84003585 84003733 -56313032 + T-rich Low_complexity Low_complexity 2 149 0 281 299 8 12 chr10 84003734 84003985 -56312780 + CT-rich Low_complexity Low_complexity 1 250 0 3244 184 5 8 chr10 84004162 84004767 -56311998 + L1P LINE L1 3706 4308 -1838 24 32 0 0 chr10 84005005 84005036 -56311729 + GC_rich Low_complexity Low_complexity 1 31 0 6263 80 21 0 chr10 84005229 84006096 -56310669 + L1P LINE L1 3807 4691 -1455 5770 105 48 14 chr10 84006740 84007665 -56309100 + L1MA3 LINE L1 5274 6229 -76 734 148 45 13 chr10 84007677 84007832 -56308933 + L1M LINE L1 5259 5418 -884 293 305 61 19 chr10 84008204 84008466 -56308299 + L1M4 LINE L1 4220 4492 -1654 1073 236 46 40 chr10 84008466 84008594 -56308171 + MLT1C LTR MaLR 1 127 -340 2052 153 53 8 chr10 84008594 84008953 -56307812 - THE1C LTR MaLR 0 375 1 1073 236 46 40 chr10 84008953 84009171 -56307594 + MLT1C LTR MaLR 127 349 -118 525 146 0 0 chr10 84009200 84009296 -56307469 - L1MA7 LINE L1 -1 6290 6195 508 165 28 0 chr10 84009312 84009421 -56307344 + L1MA7 LINE L1 6108 6219 -72 631 227 0 8 chr10 84009442 84009570 -56307195 + MLT1C LTR MaLR 340 466 -1 448 169 13 0 chr10 84009573 84009650 -56307115 + Tigger1 DNA MER2_type 5 82 -2336 607 238 60 0 chr10 84009651 84009802 -56306963 + Tigger1 DNA MER2_type 246 405 -2013 288 209 23 52 chr10 84009954 84010126 -56306639 + A-rich Low_complexity Low_complexity 2 168 0 981 165 0 6 chr10 84010355 84010513 -56306252 + AluSg/x SINE Alu 140 296 -16 233 175 63 0 chr10 84010561 84010624 -56306141 + (TA)n Simple_repeat Simple_repeat 2 68 0 312 304 70 52 chr10 84010652 84010882 -56305883 - L1MC4 LINE L1 -180 7862 7629 215 224 0 45 chr10 84011788 84011855 -56304910 + CT-rich Low_complexity Low_complexity 3 66 0 2303 187 55 16 chr10 84011984 84012423 -56304342 + MER21B LTR ERV1 282 737 -126 2802 104 28 2 chr10 84012424 84012847 -56303918 - MER57B LTR ERV1 0 434 1 2262 79 3 10 chr10 84013927 84014218 -56302547 + AluSp SINE Alu 10 298 -15 1695 93 20 8 chr10 84016450 84016697 -56300068 - L1PA8A LINE L1 0 6131 5882 1891 90 16 12 chr10 84016749 84017005 -56299760 + AluSc SINE Alu 45 301 -8 2310 87 10 0 chr10 84017118 84017416 -56299349 + AluY SINE Alu 1 301 -10 1344 156 4 4 chr10 84017589 84017814 -56298951 - L1 LINE L1 -1864 4282 4058 913 176 80 1 chr10 84017814 84018010 -56298755 - LTR47A LTR ERVL 0 452 243 1093 151 35 15 chr10 84018058 84018336 -56298429 - LTR49-int LTR ERV1 -394 5686 4455 807 78 23 113 chr10 84018336 84018593 -56298172 + AluSc SINE Alu 54 287 -22 1191 143 32 40 chr10 84018620 84018872 -56297893 - LTR49-int LTR ERV1 -851 5480 5231 3996 160 16 31 chr10 84018872 84019624 -56297141 - L1PB4 LINE L1 -1 6155 5415 265 395 0 12 chr10 84019705 84019867 -56296898 + CT-rich Low_complexity Low_complexity 1 160 0 20777 101 23 2 chr10 84019986 84023090 -56293675 + L1P LINE L1 1242 4409 -1737 331 328 8 16 chr10 84024438 84024583 -56292182 - MIR SINE MIR -63 145 19 495 359 34 4 chr10 84024971 84025205 -56291560 - MIR SINE MIR -2 260 20 376 214 229 14 chr10 84025223 84025363 -56291402 + MER5A DNA MER1_type 9 178 -11 279 0 0 0 chr10 84025560 84025591 -56291174 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 645 30 53 38 chr10 84025591 84025722 -56291043 + (TCTA)n Simple_repeat Simple_repeat 1 133 0 324 337 47 24 chr10 84026078 84026247 -56290518 + MIR3 SINE MIR 35 207 -1 2443 238 48 37 chr10 84026377 84027143 -56289622 - MER69B DNA AcHobo -91 1135 361 1723 146 59 17 chr10 84027584 84027872 -56288893 - AluJo SINE Alu -12 300 1 29 0 0 0 chr10 84027883 84027912 -56288853 + AT_rich Low_complexity Low_complexity 1 29 0 1238 226 80 29 chr10 84027958 84028308 -56288457 - MER93a LTR ERV1 0 402 35 382 265 34 60 chr10 84028377 84028645 -56288120 + L1MC5 LINE L1 7428 7688 -273 409 212 20 121 chr10 84029431 84029629 -56287136 + MER5B DNA MER1_type 1 178 0 583 221 62 0 chr10 84030775 84030920 -56285845 - MER5B DNA MER1_type -24 154 1 223 313 12 0 chr10 84031296 84031376 -56285389 + L2 LINE L2 3194 3274 -39 597 154 0 0 chr10 84031414 84031524 -56285241 + (TGGA)n Simple_repeat Simple_repeat 4 113 0 2086 115 128 33 chr10 84031604 84031994 -56284771 - MSTA LTR MaLR 0 428 2 23 0 0 0 chr10 84032922 84032945 -56283820 + GC_rich Low_complexity Low_complexity 1 23 0 296 267 58 23 chr10 84033135 84033221 -56283544 - MER77 LTR ERV1 -476 129 41 543 239 181 21 chr10 84033238 84033476 -56283289 - L2 LINE L2 -995 2319 2044 224 274 176 20 chr10 84033689 84033842 -56282923 - MIR SINE MIR 0 262 86 2461 65 0 7 chr10 84034262 84034569 -56282196 - AluY SINE Alu -6 305 1 245 215 430 7 chr10 84034648 84034797 -56281968 - MIR SINE MIR -17 245 34 346 282 58 0 chr10 84035272 84035375 -56281390 - MIR SINE MIR -98 164 56 2104 158 103 3 chr10 84036659 84037046 -56279719 + MSTB LTR MaLR 1 426 0 676 203 115 37 chr10 84037762 84037979 -56278786 - L1MA9 LINE L1 -39 6273 6040 379 162 0 14 chr10 84037985 84038059 -56278706 - L1MC3 LINE L1 -12 7773 7701 14276 118 29 23 chr10 84038091 84040059 -56276706 + Tigger1 DNA MER2_type 2 1986 -432 1584 93 0 0 chr10 84040059 84040273 -56276492 + L1PA13 LINE L1 5946 6159 -4 14276 118 29 23 chr10 84040273 84040513 -56276252 + Tigger1 DNA MER2_type 1986 2223 -195 222 37 0 0 chr10 84040517 84040544 -56276221 + (TA)n Simple_repeat Simple_repeat 2 28 0 2088 110 14 3 chr10 84040550 84040841 -56275924 - AluSg SINE Alu -16 294 1 27 22 0 22 chr10 84040841 84040865 -56275900 + AT_rich Low_complexity Low_complexity 1 25 -19 2456 80 0 3 chr10 84040865 84041177 -56275588 - AluY SINE Alu 0 311 1 27 22 0 22 chr10 84041177 84041197 -56275568 + AT_rich Low_complexity Low_complexity 25 44 0 1411 185 29 120 chr10 84041202 84041354 -56275411 - MER4A LTR ERV1 0 695 531 2297 90 0 0 chr10 84041354 84041643 -56275122 - AluSc SINE Alu -7 302 14 1411 185 29 120 chr10 84041643 84042196 -56274569 - MER4A LTR ERV1 -164 531 1 883 186 0 81 chr10 84042196 84042268 -56274497 + Tigger1 DNA MER2_type 2240 2317 -101 2107 122 7 10 chr10 84042268 84042571 -56274194 + AluSx SINE Alu 3 304 -8 883 186 0 81 chr10 84042571 84042693 -56274072 + Tigger1 DNA MER2_type 2317 2417 -1 * 2800 223 61 79 chr10 84042693 84043501 -56273264 + MER21B LTR ERV1 19 811 -52 1221 119 20 91 chr10 84043528 84043781 -56272984 - L1MC3 LINE L1 -82 7703 7469 1652 240 53 96 chr10 84044038 84044760 -56272005 + LTR8 LTR ERV1 1 691 0 647 277 120 47 chr10 84044801 84045248 -56271517 - L1M4 LINE L1 -2829 3317 2904 2189 127 0 9 chr10 84045248 84045563 -56271202 - AluSx SINE Alu 0 312 1 647 277 120 47 chr10 84045563 84046196 -56270569 - L1M4 LINE L1 -3242 2904 2158 395 172 2 31 chr10 84046200 84046294 -56270471 + LTR24B LTR ERV1 9 97 -368 632 277 35 25 chr10 84046373 84046692 -56270073 + LTR24B LTR ERV1 145 569 0 347 296 67 0 chr10 84046869 84047004 -56269761 - L1 LINE L1 -1984 4162 4019 657 205 103 26 chr10 84047230 84047386 -56269379 + MLT1J LTR MaLR 1 168 -343 508 214 92 0 chr10 84047530 84047661 -56269104 + MLT1J LTR MaLR 366 508 -3 21 0 0 0 chr10 84047846 84047867 -56268898 + AT_rich Low_complexity Low_complexity 1 21 0 361 21 21 0 chr10 84048292 84048339 -56268426 + MADE1 DNA Mariner 1 48 -32 273 351 95 19 chr10 84048863 84049179 -56267586 - L2 LINE L2 -638 2676 2337 5204 164 31 8 chr10 84049881 84050707 -56266058 + MER49 LTR ERV1 32 881 -42 2324 74 0 86 chr10 84050707 84051044 -56265721 + AluY SINE Alu 1 308 -3 5204 164 31 8 chr10 84051044 84051089 -56265676 + MER49 LTR ERV1 881 923 0 1694 161 0 58 chr10 84051384 84051713 -56265052 - AluJb SINE Alu -2 310 1 279 79 0 0 chr10 84051719 84051757 -56265008 + (T)n Simple_repeat Simple_repeat 1 38 0 1575 47 0 0 chr10 84051767 84051960 -56264805 - L1PA4 LINE L1 0 6155 5963 563 319 31 0 chr10 84052247 84052410 -56264355 + MIR SINE MIR 47 214 -48 400 305 214 34 chr10 84054721 84055137 -56261628 - L3 LINE CR1 -44 1533 1043 232 315 39 31 chr10 84055453 84055580 -56261185 + MIR3 SINE MIR 29 156 -52 320 338 32 6 chr10 84057312 84057469 -56259296 + MIR SINE MIR 47 207 -55 182 263 40 20 chr10 84058406 84058505 -56258260 - MIR3 SINE MIR -22 186 86 545 261 154 31 chr10 84058530 84058913 -56257852 - HAL1 LINE L1 -74 2433 2004 1602 130 136 30 chr10 84060161 84060500 -56256265 + THE1C LTR MaLR 1 375 0 399 127 0 0 chr10 84060670 84060733 -56256032 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 1766 119 35 53 chr10 84061429 84061747 -56255018 - MLT1B LTR MaLR -3 387 76 202 220 0 20 chr10 84062276 84062326 -56254439 - MIR SINE MIR -119 143 95 622 252 53 19 chr10 84063215 84063421 -56253344 + MIR SINE MIR 48 260 -2 633 283 31 40 chr10 84064414 84064640 -56252125 + MIR SINE MIR 12 235 -27 2900 130 64 2 chr10 84067112 84067448 -56249317 + L1MA9 LINE L1 5806 6181 -131 351 0 0 0 chr10 84067448 84067487 -56249278 + (CA)n Simple_repeat Simple_repeat 1 39 0 2900 130 64 2 chr10 84067487 84067618 -56249147 + L1MA9 LINE L1 6181 6302 -10 296 280 25 8 chr10 84067732 84067850 -56248915 - L2 LINE L2 -717 2597 2478 2284 103 0 0 chr10 84067977 84068269 -56248496 - AluSx SINE Alu -20 292 1 3109 99 24 39 chr10 84068685 84069178 -56247587 + L1PB4 LINE L1 5476 5961 -195 256 175 159 87 chr10 84069224 84069350 -56247415 + L1MC5 LINE L1 7795 7929 -32 2286 103 0 0 chr10 84069736 84070026 -56246739 - AluSc SINE Alu -19 290 1 275 281 37 0 chr10 84070668 84070750 -56246015 + MIR SINE MIR 63 147 -61 511 202 92 0 chr10 84071237 84071356 -56245409 - MIR SINE MIR -54 208 79 21 36 0 0 chr10 84071522 84071550 -56245215 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 84071740 84071777 -56244988 + AT_rich Low_complexity Low_complexity 1 37 0 2291 95 7 0 chr10 84072253 84072549 -56244216 - AluSp SINE Alu -15 298 1 2709 67 0 3 chr10 84072906 84073250 -56243515 + LTR14A LTR ERVK 1 343 -1 2103 141 3 0 chr10 84073250 84073549 -56243216 - AluSx SINE Alu -8 304 5 457 100 0 0 chr10 84073551 84073611 -56243154 - AluSq/x SINE Alu -175 137 78 1344 158 0 14 chr10 84073611 84073820 -56242945 - AluSx SINE Alu -100 212 7 593 180 87 19 chr10 84073839 84074000 -56242765 - HAL1b LINE L1 -598 750 579 24 32 0 0 chr10 84074044 84074075 -56242690 + AT_rich Low_complexity Low_complexity 1 31 0 424 299 183 9 chr10 84078944 84079376 -56237389 + L2 LINE L2 2540 3052 -261 1546 227 192 16 chr10 84081593 84082082 -56234683 - MLT1G LTR MaLR -6 584 10 2358 119 19 14 chr10 84083817 84084179 -56232586 - THE1B LTR MaLR 0 364 1 2491 70 0 3 chr10 84084317 84084615 -56232150 - AluY SINE Alu -14 297 1 250 168 18 18 chr10 84084625 84084689 -56232076 - MLT1H LTR MaLR -2 553 484 328 231 163 69 chr10 84084789 84084992 -56231773 - MLT1H LTR MaLR -246 303 82 43462 34 21 3 chr10 84085438 84091474 -56225291 - L1PA2 LINE L1 -1 6154 4 1281 196 90 40 chr10 84092377 84092839 -56223926 + MLT1E2 LTR MaLR 97 605 -49 2093 122 3 3 chr10 84094095 84094389 -56222376 - AluSg SINE Alu -16 294 1 304 232 240 0 chr10 84094579 84094704 -56222061 + MIR SINE MIR 53 207 -55 2527 87 0 0 chr10 84094939 84095250 -56221515 - AluSq SINE Alu -2 311 1 3420 173 55 7 chr10 84095739 84095995 -56220770 + MER50 LTR ERV1 1 243 -491 2263 120 0 0 chr10 84095995 84096296 -56220469 + AluSg1 SINE Alu 1 301 -8 3420 173 55 7 chr10 84096296 84096733 -56220032 + MER50 LTR ERV1 243 727 -7 283 312 88 0 chr10 84096795 84096920 -56219845 + MIR SINE MIR 126 261 -1 2035 109 0 68 chr10 84097172 84097483 -56219282 + AluSx SINE Alu 1 290 -22 1529 236 103 82 chr10 84097622 84098403 -56218362 + L1MC5 LINE L1 6277 7116 -845 2060 135 0 3 chr10 84098403 84098692 -56218073 - AluSx SINE Alu -24 288 1 1529 236 103 82 chr10 84098692 84099342 -56217423 + L1MC5 LINE L1 7116 7751 -210 5045 105 27 21 chr10 84099415 84100189 -56216576 + MER4E LTR ERV1 1 779 0 280 321 75 25 chr10 84100837 84100996 -56215769 + L2 LINE L2 2947 3113 -159 266 247 0 12 chr10 84101237 84101318 -56215447 + T-rich Low_complexity Low_complexity 3 82 0 3601 90 14 6 chr10 84101566 84102075 -56214690 + LTR10D LTR ERV1 1 513 0 1343 276 33 48 chr10 84102100 84103150 -56213615 + HERVI LTR ERV1 23 1132 -6653 34321 183 12 21 chr10 84103452 84107066 -56209699 + HERVI LTR ERV1 1144 4669 -3116 2467 68 7 0 chr10 84107066 84107373 -56209392 + AluY SINE Alu 1 309 -2 34321 183 12 21 chr10 84107373 84110446 -56206319 + HERVI LTR ERV1 4669 7769 -16 3521 101 12 0 chr10 84110459 84110966 -56205799 + LTR10D LTR ERV1 1 513 0 259 296 96 14 chr10 84111025 84111245 -56205520 - L1MEc LINE L1 -4622 1774 1537 357 233 117 53 chr10 84111428 84111634 -56205131 - L1MEc LINE L1 -4903 1302 1084 1693 156 48 38 chr10 84112819 84113190 -56203575 - THE1C LTR MaLR 0 375 1 816 219 66 47 chr10 84113222 84113548 -56203217 + MER66A LTR ERV1 170 438 -40 515 263 133 17 chr10 84113677 84113917 -56202848 + LTR16A1 LTR ERVL 190 457 0 2116 113 27 0 chr10 84114311 84114612 -56202153 + AluSx SINE Alu 2 310 -2 879 176 0 48 chr10 84115480 84115525 -56201240 - L1MB1 LINE L1 -1 6167 6121 712 200 0 0 chr10 84115525 84115650 -56201115 - FLAM_A SINE Alu -8 125 1 879 176 0 48 chr10 84115650 84115792 -56200973 - L1MB1 LINE L1 -47 6121 5989 210 256 0 58 chr10 84116036 84116122 -56200643 + CT-rich Low_complexity Low_complexity 2 82 0 206 241 93 0 chr10 84116239 84116293 -56200472 - MIR SINE MIR -116 92 34 551 183 61 0 chr10 84116761 84116876 -56199889 + MER63 DNA MER1_type 3 750 -86 237 289 0 0 chr10 84116875 84116927 -56199838 + MER63 DNA MER1_type 1006 1057 -4 * 2625 103 19 0 chr10 84117208 84117576 -56199189 + THE1C LTR MaLR 1 375 0 2127 106 27 10 chr10 84118494 84118787 -56197978 - AluSx SINE Alu -14 298 1 819 264 53 27 chr10 84118890 84119189 -56197576 + MLT1I LTR MaLR 85 391 -18 780 284 74 26 chr10 84120316 84120587 -56196178 + MLT1I LTR MaLR 104 387 -22 1676 151 10 50 chr10 84121082 84121381 -56195384 + AluJo SINE Alu 1 287 -25 192 77 0 0 chr10 84121384 84121410 -56195355 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 2047 182 75 4 chr10 84121697 84122207 -56194558 - L1M4 LINE L1 -985 5555 5010 193 271 51 0 chr10 84122377 84122436 -56194329 + MIR3 SINE MIR 99 160 -48 241 269 0 0 chr10 84123169 84123221 -56193544 + L2 LINE L2 3262 3313 0 183 220 0 40 chr10 84123408 84123458 -56193307 - MIR SINE MIR -113 149 102 564 211 179 19 chr10 84123467 84123623 -56193142 - MER5A DNA MER1_type 0 189 9 277 154 19 0 chr10 84123850 84123902 -56192863 + L1M4 LINE L1 4702 4754 -1392 1511 157 139 0 chr10 84124647 84124921 -56191844 - AluJb SINE Alu 0 312 1 2413 81 0 0 chr10 84124961 84125258 -56191507 - AluY SINE Alu -14 297 1 1828 159 23 17 chr10 84126262 84126607 -56190158 - MLT2D LTR ERVL -67 347 1 1145 53 0 0 chr10 84127373 84127505 -56189260 + AluY SINE Alu 1 132 -179 257 160 0 0 chr10 84127959 84128009 -56188756 + L1M4 LINE L1 4420 4469 -1677 * 4002 205 54 14 chr10 84128004 84128276 -56188489 - L1MDa LINE L1 -2938 3602 3342 2090 139 0 0 chr10 84128276 84128577 -56188188 - AluSx SINE Alu -9 303 3 4002 205 54 14 chr10 84128577 84130250 -56186515 - L1MDa LINE L1 -3198 3342 1579 381 298 42 24 chr10 84130258 84130426 -56186339 + L1ME LINE L1 5600 5770 -351 691 251 50 0 chr10 84130574 84130753 -56186012 + MIR SINE MIR 75 262 0 276 30 0 0 chr10 84130963 84130996 -56185769 + (TA)n Simple_repeat Simple_repeat 2 34 0 330 269 62 102 chr10 84131398 84131654 -56185111 - L1ME LINE L1 -529 5592 5347 263 321 132 38 chr10 84132010 84132169 -56184596 + L3 LINE CR1 1020 1193 -384 561 236 43 14 chr10 84132404 84132544 -56184221 + MIR SINE MIR 117 260 -2 2854 171 22 32 chr10 84133183 84133565 -56183200 - MER67B LTR ERV1 0 661 286 2131 153 22 3 chr10 84133565 84133924 -56182841 - MER47A DNA MER2_type 0 366 1 2854 171 22 32 chr10 84133924 84134167 -56182598 - MER67B LTR ERV1 -375 286 42 217 248 46 64 chr10 84135016 84135125 -56181640 - MIR SINE MIR -43 219 113 6767 203 53 28 chr10 84135447 84135579 -56181186 - L1MB8 LINE L1 -6 6983 6856 1599 179 3 50 chr10 84135579 84135881 -56180884 - AluJb SINE Alu -24 288 1 6767 203 53 28 chr10 84135881 84137166 -56179599 - L1MB8 LINE L1 -133 6856 5604 2175 79 3 50 chr10 84137166 84137278 -56179487 + AluSc SINE Alu 21 137 -172 2290 85 4 0 chr10 84137278 84137581 -56179184 + AluSp SINE Alu 1 304 0 2175 79 3 50 chr10 84137581 84137768 -56178997 + AluSc SINE Alu 137 309 0 6767 203 53 28 chr10 84137768 84138965 -56177800 - L1MB8 LINE L1 -1385 5604 4306 906 137 0 0 chr10 84139990 84140114 -56176651 - FLAM_C SINE Alu -9 124 1 987 280 23 4 chr10 84141006 84141485 -56175280 - L1MB8 LINE L1 -2631 4326 3839 455 256 91 6 chr10 84141506 84141682 -56175083 - L1MB8 LINE L1 -6658 201 11 239 345 181 13 chr10 84141827 84142053 -56174712 + L3 LINE CR1 1276 1539 -38 2081 174 10 15 chr10 84142395 84142787 -56173978 - MLT1B LTR MaLR 0 390 1 1631 189 16 16 chr10 84143600 84143907 -56172858 + AluJo SINE Alu 1 307 -5 1264 129 0 5 chr10 84144065 84144251 -56172514 + AluSp SINE Alu 120 304 -9 489 324 106 61 chr10 84144662 84145276 -56171489 - L1M4 LINE L1 -1964 4182 3545 420 306 172 48 chr10 84145487 84146419 -56170346 - L1M4 LINE L1 -2883 3263 2217 897 136 30 32 chr10 84146533 84146733 -56170032 - L1MD1 LINE L1 -8 6234 6083 367 102 0 0 chr10 84146735 84146784 -56169981 - MER93b LTR ERV1 -324 49 1 189 0 0 0 chr10 84146820 84146841 -56169924 + (TG)n Simple_repeat Simple_repeat 1 21 0 183 42 0 0 chr10 84146840 84146864 -56169901 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 1280 183 10 5 chr10 84147282 84147592 -56169173 + MLT1A1 LTR MaLR 5 365 0 2338 94 3 0 chr10 84148263 84148560 -56168205 + AluSp SINE Alu 9 306 -7 2367 148 22 3 chr10 84149466 84149823 -56166942 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr10 84150181 84150211 -56166554 + AT_rich Low_complexity Low_complexity 1 30 0 378 221 125 15 chr10 84150233 84150369 -56166396 + L1ME LINE L1 5578 5728 -393 1408 229 43 3 chr10 84150476 84150778 -56165987 - MER58B DNA MER1_type -2 339 26 23 33 0 0 chr10 84150819 84150849 -56165916 + AT_rich Low_complexity Low_complexity 1 30 0 585 240 175 62 chr10 84150909 84151246 -56165519 + MLT1H LTR MaLR 171 545 -4 1324 204 4 8 chr10 84151849 84152089 -56164676 - MER8 DNA MER2_type 0 239 1 397 293 46 11 chr10 84152263 84152437 -56164328 - MIR SINE MIR -55 207 28 5742 194 40 22 chr10 84153178 84153890 -56162875 - L1MC1 LINE L1 -12 6321 5623 1942 163 30 9 chr10 84153890 84154222 -56162543 + MER44D DNA MER2_type 1 609 0 5742 194 40 22 chr10 84154222 84155254 -56161511 - L1MC1 LINE L1 -710 5623 4531 2129 132 0 3 chr10 84155254 84155550 -56161215 - AluSx SINE Alu -11 301 7 5742 194 40 22 chr10 84155550 84155894 -56160871 - L1MC1 LINE L1 -1802 4531 4195 367 255 230 12 chr10 84156055 84156216 -56160549 + MIR SINE MIR 13 208 -54 202 355 13 59 chr10 84159597 84159749 -56157016 - L2 LINE L2 -5 3308 3164 551 261 87 20 chr10 84159775 84160088 -56156677 + LTR33 LTR ERVL 1 364 -157 226 158 0 0 chr10 84160129 84160167 -56156598 + LTR33 LTR ERVL 484 521 0 1555 227 104 34 chr10 84160177 84160649 -56156116 - MLT1D LTR MaLR 0 505 1 303 380 51 22 chr10 84160831 84161147 -56155618 - L2 LINE L2 -363 2951 2627 486 207 20 60 chr10 84162482 84162632 -56154133 + MLT2F LTR ERVL 1 144 -519 1312 209 209 32 chr10 84162798 84163033 -56153732 + MLT2B1 LTR ERVL 2 194 -326 180 0 0 0 chr10 84163033 84163053 -56153712 + (CATCT)n Simple_repeat Simple_repeat 1 20 0 1312 209 209 32 chr10 84163053 84163258 -56153507 + MLT2B1 LTR ERVL 194 520 0 1228 171 92 60 chr10 84163363 84163644 -56153121 + AluJo SINE Alu 1 290 -22 520 267 143 53 chr10 84164455 84164811 -56151954 - L2 LINE L2 -1 3312 2925 2309 71 7 3 chr10 84165787 84166102 -56150663 + AluSp SINE Alu 1 316 0 379 254 95 74 chr10 84166359 84166642 -56150123 - L1ME LINE L1 -364 5757 5469 298 231 0 22 chr10 84166668 84166759 -56150006 + L1ME4a LINE L1 5767 5855 -266 411 242 127 25 chr10 84166812 84166969 -56149796 + L1ME4a LINE L1 5947 6119 -2 1428 211 48 10 chr10 84167042 84167336 -56149429 + AluJo SINE Alu 1 305 -7 2415 58 10 3 chr10 84167540 84167835 -56148930 + AluY SINE Alu 1 297 -14 489 246 55 82 chr10 84168099 84168282 -56148483 - MER5B DNA MER1_type 0 178 1 1143 222 26 60 chr10 84168409 84168810 -56147955 + LTR10B LTR ERV1 112 540 -7 3386 198 23 82 chr10 84168810 84169840 -56146925 + LTR5 LTR ERVK 1 969 0 701 188 26 19 chr10 84170263 84170417 -56146348 + MER104 DNA Tc2 1 155 -25 702 274 0 6 chr10 84170439 84170603 -56146162 + L2 LINE L2 2531 2693 -621 4375 247 94 81 chr10 84170603 84170834 -56145931 + L2 LINE L2 343 569 -2745 2179 127 3 0 chr10 84170834 84171126 -56145639 - AluSx SINE Alu -19 293 1 4375 247 94 81 chr10 84171126 84172912 -56143853 + L2 LINE L2 569 2387 -927 804 196 191 0 chr10 84173426 84173615 -56143150 + AluJb SINE Alu 85 309 -3 464 252 156 29 chr10 84173788 84174026 -56142739 + L2 LINE L2 1576 1843 -1471 516 288 77 30 chr10 84174026 84174259 -56142506 - MLT1J LTR MaLR 0 511 268 248 275 83 28 chr10 84174398 84174507 -56142258 + MLT1H LTR MaLR 145 259 -290 1342 233 180 30 chr10 84174927 84175455 -56141310 + L2 LINE L2 1843 2449 -865 2167 72 0 0 chr10 84175477 84175755 -56141010 - L1PA8 LINE L1 -20 6152 5875 872 281 23 4 chr10 84175800 84176063 -56140702 + L1ME3 LINE L1 5762 6029 -133 236 276 0 0 chr10 84176077 84176135 -56140630 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 611 239 71 119 chr10 84176334 84176499 -56140266 + L2 LINE L2 2540 2711 -603 306 50 0 0 chr10 84176499 84176539 -56140226 + (TC)n Simple_repeat Simple_repeat 2 41 0 611 239 71 119 chr10 84176539 84176552 -56140213 + L2 LINE L2 2711 2723 -591 2145 123 0 13 chr10 84176552 84176852 -56139913 - AluSx SINE Alu -16 296 1 611 239 71 119 chr10 84176852 84176940 -56139825 + L2 LINE L2 2723 2794 -520 4089 104 238 23 chr10 84176960 84178233 -56138532 + pTR5 LTR ERV1 743 2438 0 220 308 23 39 chr10 84178239 84178369 -56138396 + L2 LINE L2 3013 3140 -173 1835 248 23 41 chr10 84178385 84178550 -56138215 + MLT1H1 LTR MaLR 27 194 -361 2235 106 0 10 chr10 84178550 84178852 -56137913 - AluY SINE Alu -12 299 1 1835 248 23 41 chr10 84178852 84179218 -56137547 + MLT1H1 LTR MaLR 194 548 -7 1855 145 31 0 chr10 84179351 84179641 -56137124 + AluSg SINE Alu 1 299 -11 2175 112 0 7 chr10 84180206 84180500 -56136265 + AluSq SINE Alu 3 294 -19 27145 118 54 68 chr10 84180506 84186355 -56130410 + L1PA8 LINE L1 2 5764 -408 1157 109 29 0 chr10 84186343 84186518 -56130247 + L1P LINE L1 3492 3671 -2475 * 3068 82 7 17 chr10 84186518 84186927 -56129838 + L1PA8 LINE L1 5762 6171 -1 209 136 0 23 chr10 84187072 84187116 -56129649 + (GGGAGA)n Simple_repeat Simple_repeat 1 43 0 2417 54 7 3 chr10 84187246 84187541 -56129224 - AluY SINE Alu -15 296 1 236 184 69 23 chr10 84187960 84188047 -56128718 + L1MEd LINE L1 45 135 -5984 2097 115 16 44 chr10 84188339 84188474 -56128291 + AluSx SINE Alu 1 138 -174 2511 68 0 10 chr10 84188474 84188784 -56127981 + AluY SINE Alu 2 308 -3 2097 115 16 44 chr10 84188784 84188969 -56127796 + AluSx SINE Alu 138 312 0 4524 185 39 32 chr10 84189053 84190118 -56126647 - MER69 DNA AcHobo -4 2522 1451 815 346 18 18 chr10 84190281 84190610 -56126155 + L1M3a LINE L1 1 329 -5626 4336 239 98 9 chr10 84191767 84193087 -56123678 + L1M3a LINE L1 369 1806 -4228 1903 93 0 0 chr10 84193090 84193338 -56123427 + L1PB4 LINE L1 -111 136 -5898 * 20591 31 0 1 chr10 84193337 84196531 -56120234 + L1PA4 LINE L1 2964 6155 0 7819 197 30 14 chr10 84196569 84198655 -56118110 + L1PB4 LINE L1 1825 3950 -2084 28171 117 14 57 chr10 84198706 84205140 -56111625 - L1PA7 LINE L1 0 6154 9 695 180 8 16 chr10 84205352 84205480 -56111285 + FLAM_C SINE Alu 5 131 -12 2178 157 18 27 chr10 84205494 84205657 -56111108 + MSTB1 LTR MaLR 36 199 -233 2420 50 3 20 chr10 84205657 84205956 -56110809 + AluY SINE Alu 4 297 -14 2178 157 18 27 chr10 84205956 84206193 -56110572 + MSTB1 LTR MaLR 199 432 0 438 224 0 26 chr10 84206196 84206312 -56110453 + MER4B-int LTR ERV1 881 993 -4130 653 256 99 41 chr10 84206321 84206563 -56110202 + MER34C LTR ERV1 159 414 -171 1427 186 52 66 chr10 84206576 84207118 -56109647 + MER4B-int LTR ERV1 1868 2416 -3915 2241 78 7 3 chr10 84207118 84207414 -56109351 - AluY SINE Alu -14 297 1 1427 186 52 66 chr10 84207414 84207598 -56109167 + MER4B-int LTR ERV1 2416 3464 -2867 375 188 0 34 chr10 84207703 84207820 -56108945 + MER4B-int LTR ERV1 1838 1950 -3173 2238 207 21 36 chr10 84207912 84208617 -56108148 + MER4B-int LTR ERV1 2790 4632 -1953 363 203 0 14 chr10 84208623 84208697 -56108068 + MER4B-int LTR ERV1 5169 5241 -1090 5179 156 29 22 chr10 84208697 84210172 -56106593 + L1PB4 LINE L1 4544 6043 -1 2444 128 33 62 chr10 84210172 84210438 -56106327 + MER4B-int LTR ERV1 5231 5503 -945 1640 92 26 4 chr10 84210438 84210666 -56106099 - AluSc SINE Alu -23 286 54 2444 128 33 62 chr10 84210666 84210940 -56105825 + MER4B-int LTR ERV1 5503 5806 -642 836 164 85 0 chr10 84211007 84211184 -56105581 + LTR47A LTR ERVL 261 452 0 6637 151 39 4 chr10 84211184 84213347 -56103418 + L1MA4 LINE L1 4058 6294 -6 26 30 0 0 chr10 84213350 84213383 -56103382 + AT_rich Low_complexity Low_complexity 1 33 0 35 63 0 0 chr10 84213803 84213866 -56102899 + AT_rich Low_complexity Low_complexity 1 63 0 2153 125 0 0 chr10 84213884 84214180 -56102585 - AluSx SINE Alu -16 296 1 539 270 124 24 chr10 84214465 84214843 -56101922 - L1M4 LINE L1 -1711 4435 4020 334 274 70 38 chr10 84216527 84216684 -56100081 - MIR3 SINE MIR -7 201 40 243 346 188 5 chr10 84216797 84216999 -56099766 + MIR SINE MIR 4 242 -20 1860 164 39 6 chr10 84217091 84217426 -56099339 + MER7A DNA MER2_type 2 345 -1 227 213 0 16 chr10 84220830 84220891 -56095874 + (TA)n Simple_repeat Simple_repeat 1 60 0 280 319 217 54 chr10 84221298 84221634 -56095131 + L2 LINE L2 2882 3272 0 912 202 72 29 chr10 84221693 84221970 -56094795 + MLT1C LTR MaLR 34 322 -145 6085 139 126 93 chr10 84221985 84223627 -56093138 + pTR5 LTR ERV1 743 2438 0 517 240 16 16 chr10 84223628 84223762 -56093003 + MLT1C LTR MaLR 349 466 -1 345 283 38 0 chr10 84223949 84224055 -56092710 - MIR SINE MIR -53 209 100 199 283 330 6 chr10 84225465 84225638 -56091127 - MIR SINE MIR -13 249 21 25 75 0 0 chr10 84228098 84228151 -56088614 + AT_rich Low_complexity Low_complexity 1 53 0 14576 59 6 0 chr10 84228159 84230777 -56085988 - L1PA6 LINE L1 -5 6149 3500 433 338 78 20 chr10 84230784 84231067 -56085698 - L1ME3A LINE L1 -306 5864 5564 3161 156 52 3 chr10 84231067 84231669 -56085096 + L1MA5 LINE L1 5670 6300 0 513 208 58 8 chr10 84231964 84232102 -56084663 + L1M2 LINE L1 11 218 -6631 7064 220 73 26 chr10 84232112 84235753 -56081012 + L1M2 LINE L1 1709 5598 -1250 1787 164 0 38 chr10 84235903 84236086 -56080679 - AluJb SINE Alu -7 305 138 249 57 0 0 chr10 84236086 84236121 -56080644 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1787 164 0 38 chr10 84236121 84236254 -56080511 - AluJb SINE Alu -174 138 1 748 198 22 50 chr10 84236275 84236457 -56080308 - MER20 DNA MER1_type -42 177 1 960 215 4 28 chr10 84237020 84237160 -56079605 + L1MA5A LINE L1 4309 4442 -2406 2429 139 57 57 chr10 84237160 84237671 -56079094 + MER9 LTR ERVK 1 511 0 960 215 4 28 chr10 84237671 84237781 -56078984 + L1MA5A LINE L1 4442 4553 -2295 232 204 57 11 chr10 84237781 84237869 -56078896 - L1 LINE L1 -2170 3976 3885 5157 166 29 3 chr10 84238155 84239500 -56077265 + L1MA5A LINE L1 5618 6996 -3 4279 150 36 4 chr10 84239524 84240332 -56076433 - L1PA15 LINE L1 -9 6156 5323 * 10554 96 3 1 chr10 84240320 84240332 -56076433 - L1PA15 LINE L1 -1058 5088 5078 5392 83 12 0 chr10 84240332 84241577 -56075188 - L1PA8 LINE L1 -6 6166 4983 10554 96 3 1 chr10 84241577 84243146 -56073619 - L1PA15 LINE L1 -1068 5078 3503 1769 169 31 8 chr10 84243147 84243537 -56073228 - L1P LINE L1 -815 5331 4933 436 348 5 5 chr10 84243788 84243972 -56072793 - MLT1F-int LTR MaLR -488 883 700 592 275 76 26 chr10 84244229 84244679 -56072086 - MLT1F-int LTR MaLR -776 595 4 957 252 66 87 chr10 84244680 84245208 -56071557 - MLT1F LTR MaLR 0 542 26 1452 212 67 72 chr10 84245695 84246377 -56070388 - L1MC5 LINE L1 -608 7353 6709 542 238 109 12 chr10 84246383 84246631 -56070134 + L1ME LINE L1 4264 4535 -1611 * 26208 72 5 5 chr10 84246630 84250113 -56066652 + L1P LINE L1 3 3487 -2659 17663 30 6 0 chr10 84250318 84253064 -56063701 + L1PA4 LINE L1 3401 6153 -2 2128 232 21 18 chr10 84253072 84253641 -56063124 + L1ME LINE L1 4523 5093 -1053 647 87 11 0 chr10 84254015 84254107 -56062658 - L1PA16 LINE L1 -9 6157 6065 2050 104 0 52 chr10 84254112 84254259 -56062506 + AluSx SINE Alu 1 154 -158 2425 74 0 10 chr10 84254259 84254569 -56062196 + AluY SINE Alu 1 307 -4 2050 104 0 52 chr10 84254569 84254747 -56062018 + AluSx SINE Alu 154 309 -3 1014 196 0 6 chr10 84254747 84254926 -56061839 + AluJb SINE Alu 134 311 -1 222 171 0 0 chr10 84255240 84255275 -56061490 - L3 LINE CR1 -607 970 936 2439 143 64 0 chr10 84256315 84256708 -56060057 + MSTB LTR MaLR 2 419 -7 490 145 0 0 chr10 84257110 84257179 -56059586 - AluJo SINE Alu -163 149 81 289 265 48 54 chr10 84257299 84257470 -56059295 + MIR SINE MIR 42 214 -48 539 174 11 0 chr10 84257474 84257566 -56059199 + MLT1F LTR MaLR 1 93 -449 1651 164 43 16 chr10 84257845 84258149 -56058616 - AluJb SINE Alu 0 312 1 31 0 0 0 chr10 84258152 84258183 -56058582 + AT_rich Low_complexity Low_complexity 1 31 0 489 306 59 0 chr10 84258365 84258535 -56058230 + MIR SINE MIR 19 198 -64 2290 115 0 0 chr10 84259051 84259355 -56057410 + AluSx SINE Alu 1 304 -8 262 245 109 98 chr10 84259376 84259560 -56057205 + L1ME LINE L1 5539 5726 -395 1081 216 76 30 chr10 84259971 84260299 -56056466 + L1MCc LINE L1 17 359 -6064 250 287 32 43 chr10 84260958 84261052 -56055713 - L2 LINE L2 -17 3296 3204 810 205 0 0 chr10 84261080 84261202 -56055563 + FLAM_C SINE Alu 5 126 -17 2345 95 0 3 chr10 84261208 84261513 -56055252 + AluSx SINE Alu 1 304 -8 238 321 53 21 chr10 84261528 84261718 -56055047 + L1ME LINE L1 5531 5726 -395 1258 220 96 28 chr10 84262129 84262556 -56054209 + L1MCc LINE L1 17 472 -5951 656 219 263 9 chr10 84262738 84263058 -56053707 + L1MCc LINE L1 818 1218 -5205 288 240 10 10 chr10 84263070 84263166 -56053599 + L1MCc LINE L1 1616 1711 -5230 23 33 0 0 chr10 84267008 84267038 -56049727 + AT_rich Low_complexity Low_complexity 1 30 0 1032 146 64 109 chr10 84267516 84267736 -56049029 + MER63A DNA MER1_type 1 210 0 1181 176 33 0 chr10 84268011 84268221 -56048544 + MER20 DNA MER1_type 3 219 0 2187 61 6 54 chr10 84269341 84269654 -56047111 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 84270354 84270377 -56046388 + AT_rich Low_complexity Low_complexity 1 23 0 6568 99 16 11 chr10 84270382 84271332 -56045433 - L1MA3 LINE L1 0 6305 5351 10107 173 17 8 chr10 84271348 84273249 -56043516 - L1MA3 LINE L1 -1072 5074 3158 648 216 9 0 chr10 84273258 84273374 -56043391 + FLAM_C SINE Alu 2 118 -15 198 0 0 0 chr10 84273375 84273397 -56043368 + (CA)n Simple_repeat Simple_repeat 2 23 0 25 31 0 0 chr10 84273696 84273728 -56043037 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr10 84273813 84273844 -56042921 + AT_rich Low_complexity Low_complexity 1 31 0 328 258 57 50 chr10 84273899 84274058 -56042707 + L1MC4 LINE L1 7695 7854 -188 242 250 0 0 chr10 84274077 84274141 -56042624 + GA-rich Low_complexity Low_complexity 1 64 0 730 115 0 35 chr10 84274276 84274389 -56042376 + AluJo SINE Alu 28 136 -176 1420 207 51 14 chr10 84274389 84274664 -56042101 + AluJo SINE Alu 2 286 -16 836 318 107 19 chr10 84274701 84275167 -56041598 - MLT1J LTR MaLR -2 509 3 339 118 0 0 chr10 84275363 84275414 -56041351 - MADE1 DNA Mariner 0 80 30 288 190 0 35 chr10 84275419 84275477 -56041288 - AluJo SINE Alu -160 142 87 1179 204 0 19 chr10 84275480 84275696 -56041069 - AluJo SINE Alu -94 218 7 307 67 22 0 chr10 84275697 84275742 -56041023 - MADE1 DNA Mariner -34 46 1 2678 145 29 7 chr10 84276875 84277296 -56039469 - MSTB1 LTR MaLR 0 432 3 1809 198 82 49 chr10 84277964 84278008 -56038757 + MLT1D LTR MaLR 1 42 -463 2298 69 253 8 chr10 84278008 84278368 -56038397 - LTR7 LTR ERV1 -2 448 1 1809 198 82 49 chr10 84278368 84278771 -56037994 + MLT1D LTR MaLR 42 430 -75 1124 231 44 0 chr10 84278771 84279000 -56037765 - MER8 DNA MER2_type 0 239 1 2357 87 0 10 chr10 84279003 84279303 -56037462 - AluSg SINE Alu -13 297 1 1809 198 82 49 chr10 84279303 84279339 -56037426 + MLT1D LTR MaLR 431 505 0 292 346 47 0 chr10 84279597 84279724 -56037041 - MIR SINE MIR -82 180 48 340 303 41 14 chr10 84280826 84280971 -56035794 - MIR SINE MIR 0 262 114 1548 203 3 20 chr10 84281061 84281357 -56035408 + AluJo SINE Alu 1 291 -21 408 328 122 4 chr10 84281424 84281647 -56035118 + MIR SINE MIR 6 251 -11 180 152 0 0 chr10 84282239 84282272 -56034493 + (TG)n Simple_repeat Simple_repeat 1 33 0 2342 102 0 0 chr10 84282642 84282946 -56033819 - AluSq SINE Alu -9 304 1 2315 154 5 19 chr10 84283421 84283791 -56032974 - MLT1A1 LTR MaLR 0 365 1 485 296 91 28 chr10 84284719 84285006 -56031759 + L1ME4a LINE L1 5523 5827 -294 28 29 0 0 chr10 84285735 84285770 -56030995 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr10 84286608 84286634 -56030131 + AT_rich Low_complexity Low_complexity 1 26 0 303 263 30 53 chr10 84287014 84287147 -56029618 + MIR SINE MIR 22 151 -111 4713 107 10 3 chr10 84287839 84288447 -56028318 + LTR9 LTR ERV1 1 612 0 478 319 81 17 chr10 84289190 84289425 -56027340 + MIR SINE MIR 13 262 0 5430 142 45 44 chr10 84289468 84290519 -56026246 + L1MC2 LINE L1 5282 6333 -11 417 177 213 7 chr10 84290522 84290663 -56026102 + HAL1 LINE L1 1417 1586 -921 21 57 0 0 chr10 84290678 84290713 -56026052 + AT_rich Low_complexity Low_complexity 1 35 0 191 387 84 60 chr10 84290849 84291052 -56025713 - L2 LINE L2 -338 2976 2759 1151 227 4 13 chr10 84291052 84291277 -56025488 - MER58A DNA MER1_type 0 224 2 191 387 84 60 chr10 84291277 84291440 -56025325 - L2 LINE L2 -555 2759 2601 1942 160 11 42 chr10 84291695 84292077 -56024688 + LTR55 LTR ERV 4 373 -175 376 200 12 0 chr10 84292118 84292198 -56024567 + LTR55 LTR ERV 461 541 -7 337 337 95 41 chr10 84292239 84292628 -56024137 - L2 LINE L2 -1100 2214 1805 200 357 83 9 chr10 84293067 84293193 -56023572 + MIR3 SINE MIR 12 146 -82 3249 167 4 15 chr10 84293340 84293880 -56022885 + MER44D DNA MER2_type 4 592 -13 238 302 10 18 chr10 84293903 84293997 -56022768 - MER5B DNA MER1_type -3 175 92 387 273 73 36 chr10 84294540 84294705 -56022060 - MIR SINE MIR -74 188 18 599 303 54 25 chr10 84294796 84295037 -56021728 + L1ME3A LINE L1 14 261 -6281 4874 117 38 8 chr10 84295297 84296078 -56020687 - SVA Other Other -550 836 32 1170 189 148 30 chr10 84296617 84296887 -56019878 - AluJo SINE Alu 0 302 1 3589 147 21 2 chr10 84297713 84298471 -56018294 - L1M2 LINE L1 -743 5403 4787 1557 165 35 28 chr10 84299201 84299486 -56017279 + AluJb SINE Alu 1 287 -25 257 347 110 40 chr10 84300735 84301061 -56015704 + L2 LINE L2 2188 2536 -778 901 279 49 16 chr10 84301160 84301404 -56015361 + MLT1E LTR MaLR 1 252 -341 21 0 0 0 chr10 84302170 84302191 -56014574 + AT_rich Low_complexity Low_complexity 1 21 0 273 265 47 90 chr10 84304751 84305030 -56011735 + L1ME3A LINE L1 1478 1744 -4890 2284 131 15 38 chr10 84305076 84305473 -56011292 - MLT1B LTR MaLR -1 389 2 1941 137 0 37 chr10 84305689 84305988 -56010777 - AluSx SINE Alu -24 288 1 1279 231 54 10 chr10 84305992 84306287 -56010478 - AluJo SINE Alu -1 311 4 2223 59 3 3 chr10 84307816 84308106 -56008659 - L1P LINE L1 -1416 4730 4441 1539 273 20 36 chr10 84308119 84308731 -56008034 + L1ME3A LINE L1 2941 3542 -3102 369 321 20 25 chr10 84312079 84312275 -56004490 - MIR SINE MIR -65 197 3 278 247 0 13 chr10 84312289 84312366 -56004399 + MIR SINE MIR 65 140 -122 253 258 16 0 chr10 84313374 84313436 -56003329 - AluSg/x SINE Alu -131 171 109 237 139 266 51 chr10 84315193 84315272 -56001493 + L2 LINE L2 3212 3307 -6 320 284 17 17 chr10 84316164 84316280 -56000485 + L1ME3A LINE L1 5532 5647 -997 569 239 81 58 chr10 84316333 84316592 -56000173 + L1ME3A LINE L1 6399 6663 -5 4786 214 14 10 chr10 84317408 84318916 -55997849 + L1PBa LINE L1 2188 3758 -3104 22 56 0 0 chr10 84321861 84321897 -55994868 + AT_rich Low_complexity Low_complexity 1 36 0 1678 174 3 21 chr10 84321897 84322184 -55994581 + AluJo SINE Alu 1 282 -30 185 0 0 39 chr10 84322188 84322214 -55994551 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 973 173 0 69 chr10 84322624 84322826 -55993939 - AluJb SINE Alu -5 307 120 619 259 0 6 chr10 84322841 84323015 -55993750 - AluY SINE Alu -128 183 11 223 291 0 0 chr10 84323599 84323654 -55993111 + L2 LINE L2 2997 3051 -221 813 230 56 14 chr10 84323734 84323947 -55992818 + MIR SINE MIR 15 236 -26 461 271 63 20 chr10 84323948 84324192 -55992573 + MLT1G LTR MaLR 28 282 -308 1734 133 95 43 chr10 84324912 84325258 -55991507 + L1MC/D LINE L1 5457 5820 -524 2465 99 8 8 chr10 84325263 84325618 -55991147 + THE1A LTR MaLR 1 355 0 1430 179 6 58 chr10 84325648 84325960 -55990805 + AluJo SINE Alu 5 300 -12 3329 112 4 4 chr10 84325960 84326423 -55990342 + LTR10E LTR ERV1 171 633 0 353 319 43 28 chr10 84326444 84326585 -55990180 + L2 LINE L2 3098 3240 -32 288 313 0 0 chr10 84326606 84326689 -55990076 - MIR SINE MIR -2 260 178 1876 104 0 15 chr10 84326891 84327151 -55989614 - AluSx SINE Alu -50 262 7 375 146 155 29 chr10 84327177 84327280 -55989485 - L1MA4 LINE L1 -1 6299 6184 2117 124 0 0 chr10 84327736 84328035 -55988730 + AluSx SINE Alu 14 312 0 216 0 0 0 chr10 84328080 84328104 -55988661 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2087 134 7 7 chr10 84328175 84328482 -55988283 - AluSx SINE Alu -5 307 1 32 0 0 0 chr10 84328818 84328850 -55987915 + AT_rich Low_complexity Low_complexity 1 32 0 2284 94 0 10 chr10 84330096 84330395 -55986370 - AluSq SINE Alu -15 298 3 23 92 0 0 chr10 84330508 84330573 -55986192 + AT_rich Low_complexity Low_complexity 1 65 0 668 202 14 67 chr10 84330695 84331091 -55985674 - AluSx SINE Alu 0 396 16 254 258 172 0 chr10 84332372 84332500 -55984265 + MIR SINE MIR 47 196 -66 186 43 0 0 chr10 84332568 84332591 -55984174 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1183 94 0 0 chr10 84332593 84332742 -55984023 - AluSg/x SINE Alu -30 280 132 2198 120 3 0 chr10 84332742 84333041 -55983724 - AluSq SINE Alu -13 300 1 675 106 26 18 chr10 84333150 84333284 -55983481 - FLAM_C SINE Alu 0 139 5 1148 120 0 6 chr10 84334641 84334808 -55981957 - AluSg/x SINE Alu -7 303 138 505 223 78 36 chr10 84335874 84336040 -55980725 - MIR SINE MIR -11 251 79 2332 94 7 0 chr10 84336323 84336622 -55980143 - AluSx SINE Alu -11 301 1 705 291 98 18 chr10 84336696 84337160 -55979605 - L1P4 LINE L1 -474 5692 5173 2122 133 3 19 chr10 84337161 84337477 -55979288 + AluSx SINE Alu 2 312 0 1491 287 119 30 chr10 84338181 84339522 -55977243 + L2 LINE L2 1763 3237 -35 227 313 24 0 chr10 84340602 84340703 -55976062 - MIR SINE MIR -62 146 46 2332 157 87 2 chr10 84341938 84342384 -55974381 - MER31A LTR ERV1 -1 484 1 2123 104 11 7 chr10 84344269 84344549 -55972216 + AluSx SINE Alu 1 281 -31 351 44 0 0 chr10 84344566 84344611 -55972154 + (TC)n Simple_repeat Simple_repeat 2 46 0 198 103 0 0 chr10 84344623 84344652 -55972113 + (CA)n Simple_repeat Simple_repeat 2 30 0 637 247 95 5 chr10 84344653 84344843 -55971922 + L1MC4a LINE L1 5701 5907 -1901 1952 122 12 86 chr10 84344993 84345330 -55971435 - AluSx SINE Alu 0 312 1 981 83 94 66 chr10 84345356 84345537 -55971228 + MLT1C LTR MaLR 1 186 -281 746 137 8 8 chr10 84347331 84347455 -55969310 + AluSq/x SINE Alu 13 136 -176 2170 125 14 0 chr10 84347458 84347754 -55969011 + AluSx SINE Alu 4 303 -9 26 0 0 0 chr10 84347941 84347967 -55968798 + AT_rich Low_complexity Low_complexity 1 26 0 2190 81 6 69 chr10 84348127 84348447 -55968318 + AluSq SINE Alu 1 300 -13 315 287 125 7 chr10 84348580 84348716 -55968049 + L2 LINE L2 3161 3312 -1 228 35 0 0 chr10 84349768 84349797 -55966968 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 256 0 0 chr10 84350996 84351039 -55965726 - L2 LINE L2 -24 3248 3206 2168 120 0 0 chr10 84351807 84352106 -55964659 + AluSg SINE Alu 6 304 -6 1239 162 10 10 chr10 84352289 84352486 -55964279 + AluJo SINE Alu 86 282 -30 1806 140 0 4 chr10 84352931 84353222 -55963543 + AluSx SINE Alu 22 311 0 200 167 0 42 chr10 84354815 84354863 -55961902 + A-rich Low_complexity Low_complexity 1 46 0 26 30 0 0 chr10 84355264 84355297 -55961468 + AT_rich Low_complexity Low_complexity 1 33 0 581 126 0 29 chr10 84355680 84355783 -55960982 + FLAM_A SINE Alu 42 141 -1 405 39 0 0 chr10 84355875 84355926 -55960839 + (TG)n Simple_repeat Simple_repeat 1 51 0 2199 122 0 3 chr10 84356098 84356401 -55960364 - AluSx SINE Alu -10 302 1 317 229 12 12 chr10 84356404 84356487 -55960278 - L1M LINE L1 -2412 5396 5314 2152 105 31 3 chr10 84357261 84357555 -55959210 - AluSg SINE Alu -8 302 1 1525 157 69 153 chr10 84357686 84357793 -55958972 + MLT2D LTR ERVL 1 115 -299 1908 153 0 20 chr10 84357793 84358094 -55958671 - AluJb SINE Alu -17 295 1 1525 157 69 153 chr10 84358094 84358438 -55958327 + MLT2D LTR ERVL 115 414 0 223 373 42 0 chr10 84360310 84360428 -55956337 - MIR SINE MIR -53 209 87 183 80 0 0 chr10 84360945 84360970 -55955795 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 185 276 121 0 chr10 84361898 84361956 -55954809 + L2 LINE L2 3189 3253 -19 600 280 6 6 chr10 84362543 84362700 -55954065 - AluSx SINE Alu -155 157 1 550 307 28 11 chr10 84362747 84362923 -55953842 - MIR SINE MIR -70 192 14 718 208 97 96 chr10 84363046 84363189 -55953576 + MLT1C LTR MaLR 34 175 -292 1663 166 0 4 chr10 84363189 84363466 -55953299 + AluJb SINE Alu 26 301 -11 2041 152 0 3 chr10 84363470 84363772 -55952993 + AluSx SINE Alu 1 301 -11 718 208 97 96 chr10 84363772 84363996 -55952769 + MLT1C LTR MaLR 177 377 -90 441 291 30 111 chr10 84364140 84364374 -55952391 - L2 LINE L2 -43 3229 3015 1393 168 122 8 chr10 84364439 84364701 -55952064 - MLT1C LTR MaLR 0 467 176 2126 132 3 0 chr10 84364702 84364997 -55951768 - AluSx SINE Alu -16 296 1 1437 186 80 17 chr10 84365509 84365962 -55950803 + MLT1F LTR MaLR 1 567 0 273 57 0 0 chr10 84366124 84366159 -55950606 + (TC)n Simple_repeat Simple_repeat 2 36 0 419 97 61 0 chr10 84366162 84366276 -55950489 + (TA)n Simple_repeat Simple_repeat 2 122 0 1222 116 6 12 chr10 84366315 84366515 -55950250 - AluSg/x SINE Alu 0 310 112 271 254 0 0 chr10 84366656 84366711 -55950054 + MSTD LTR MaLR 218 272 -124 1778 170 0 4 chr10 84366869 84367145 -55949620 - AluJb SINE Alu -32 280 6 2130 106 0 50 chr10 84367200 84367521 -55949244 - AluSx SINE Alu -7 305 1 1095 260 116 16 chr10 84368044 84368494 -55948271 + L1MC4 LINE L1 7547 8041 -1 219 200 0 0 chr10 84369069 84369124 -55947641 - L2 LINE L2 -304 2968 2914 2329 90 0 0 chr10 84370111 84370400 -55946365 + AluSx SINE Alu 1 289 -23 2377 115 0 0 chr10 84370973 84371285 -55945480 + AluSq SINE Alu 1 312 -1 36042 36 3 0 chr10 84371912 84376793 -55939972 + L1PA4 LINE L1 1034 5927 -228 3051 247 45 12 chr10 84377120 84378189 -55938576 + L1ME1 LINE L1 1002 2249 -4314 1562 206 67 6 chr10 84378201 84378545 -55938220 - MLT1A1 LTR MaLR 0 365 1 4981 227 69 17 chr10 84378546 84380601 -55936164 + L1ME1 LINE L1 4241 6397 -5 5135 234 114 7 chr10 84380611 84381476 -55935289 + L1M3 LINE L1 3437 4208 -1976 2082 154 12 45 chr10 84381476 84381879 -55934886 + MLT1B LTR MaLR 1 390 0 5135 234 114 7 chr10 84381879 84382949 -55933816 + L1M3 LINE L1 4208 5586 -598 1307 99 47 28 chr10 84382943 84383199 -55933566 - L1P4 LINE L1 -687 5476 5217 * 4579 121 5 9 chr10 84383200 84383853 -55932912 + L1PA13 LINE L1 5512 6161 -2 807 204 81 16 chr10 84383853 84384039 -55932726 + L1M3 LINE L1 5571 5768 -412 2213 134 24 53 chr10 84384040 84384414 -55932351 + Tigger2 DNA MER2_type 2356 2718 0 568 290 100 33 chr10 84384651 84385059 -55931706 - MER101 LTR ERV1 -55 419 39 274 311 124 42 chr10 84385892 84386133 -55930632 + HAL1 LINE L1 2222 2482 -25 201 261 0 0 chr10 84386363 84386409 -55930356 + CT-rich Low_complexity Low_complexity 1 46 0 1188 290 62 20 chr10 84386463 84386866 -55929899 + LTR16A LTR ERVL 17 436 -14 2317 97 0 3 chr10 84386905 84387203 -55929562 + AluSc SINE Alu 1 297 -12 234 272 24 40 chr10 84387641 84387766 -55928999 - L2 LINE L2 -122 3191 3069 334 245 71 71 chr10 84388372 84388556 -55928209 + L1MEd LINE L1 916 1099 -5020 592 315 34 19 chr10 84388598 84388840 -55927925 - MIR SINE MIR 0 262 18 1019 201 238 67 chr10 84390166 84390629 -55926136 + MLT1E1 LTR MaLR 113 654 0 302 148 136 23 chr10 84392480 84392568 -55924197 - LTR50 LTR ERVL 0 795 698 997 209 18 64 chr10 84392628 84392911 -55923854 - MER31B LTR ERV1 -55 411 142 3620 141 83 20 chr10 84392911 84393634 -55923131 - LTR1B LTR ERV1 0 785 1 666 170 14 54 chr10 84393634 84393776 -55922989 - MER31A LTR ERV1 -349 136 1 1008 253 171 11 chr10 84393777 84394308 -55922457 - LTR50 LTR ERVL -99 696 1 2245 184 12 12 chr10 84394406 84394809 -55921956 + MER57A LTR ERV1 1 403 0 1520 172 82 60 chr10 84395332 84395734 -55921031 + MER34C LTR ERV1 165 575 -10 4175 77 5 16 chr10 84395825 84396314 -55920451 - MER41A LTR ERV1 0 554 70 2741 85 65 0 chr10 84396314 84396668 -55920097 - MER51B LTR ERV1 0 377 1 4175 77 5 16 chr10 84396668 84396738 -55920027 - MER41A LTR ERV1 -484 70 1 1826 168 83 14 chr10 84397471 84397834 -55918931 + LTR8A LTR ERV1 1 388 -339 297 100 20 20 chr10 84397838 84397888 -55918877 - HUERS-P1 LTR ERV1 -3348 1532 1483 * 345 200 40 13 chr10 84397858 84397933 -55918832 - HUERS-P1 LTR ERV1 -5487 844 768 2183 142 0 0 chr10 84397934 84398245 -55918520 + AluSx SINE Alu 2 312 0 5198 197 72 36 chr10 84398255 84399567 -55917198 - HUERS-P1 LTR ERV1 -4648 1615 4 1127 204 43 5 chr10 84399567 84399775 -55916990 - HUERS-P1 LTR ERV1 -6047 216 1 530 240 0 0 chr10 84399775 84399875 -55916890 - LTR8A LTR ERV1 0 727 628 3118 119 39 86 chr10 84400227 84400867 -55915898 + MER4B LTR ERV1 1 610 0 288 264 11 11 chr10 84400898 84400985 -55915780 - MIR SINE MIR 0 262 176 233 354 0 0 chr10 84401000 84401079 -55915686 - L2 LINE L2 -6 3307 3229 1709 137 68 22 chr10 84401126 84401447 -55915318 - MER61A LTR ERV1 0 343 8 16376 94 41 18 chr10 84401472 84401904 -55914861 - MER61A-int LTR ERV1 0 5217 4796 2387 92 0 0 chr10 84401904 84402210 -55914555 + AluSg SINE Alu 1 306 -4 16376 94 41 18 chr10 84402210 84404158 -55912607 - MER61A-int LTR ERV1 -421 4796 2783 1556 148 72 20 chr10 84404158 84404463 -55912302 - MER61A LTR ERV1 -22 321 1 272 336 33 8 chr10 84404487 84404609 -55912156 - MIR SINE MIR -91 171 47 503 193 304 0 chr10 84405225 84405360 -55911405 + MER5A DNA MER1_type 14 189 0 305 350 16 8 chr10 84405373 84405496 -55911269 + MIR3 SINE MIR 78 201 -7 195 432 8 0 chr10 84405594 84405726 -55911039 - MIR SINE MIR -125 137 5 1992 143 35 24 chr10 84405918 84406289 -55910476 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr10 84406391 84406415 -55910350 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr10 84406715 84406753 -55910012 + AT_rich Low_complexity Low_complexity 1 38 0 270 286 26 13 chr10 84407095 84407172 -55909593 - L2 LINE L2 -14 3299 3222 21 36 0 0 chr10 84407204 84407232 -55909533 + AT_rich Low_complexity Low_complexity 1 28 0 481 317 80 41 chr10 84407282 84407620 -55909145 - L2 LINE L2 -753 2561 2211 206 167 21 0 chr10 84408365 84408413 -55908352 + A-rich Low_complexity Low_complexity 5 53 0 317 371 68 0 chr10 84409185 84409422 -55907343 + L1MC/D LINE L1 5381 5633 -2175 200 310 0 35 chr10 84410152 84410265 -55906500 + GA-rich Low_complexity Low_complexity 4 112 0 371 336 76 15 chr10 84410480 84410810 -55905955 + L1MC4a LINE L1 5338 5687 -2121 603 208 6 64 chr10 84410811 84410939 -55905826 + MIR SINE MIR 74 191 -71 1965 143 0 19 chr10 84410939 84411246 -55905519 + AluSx SINE Alu 1 301 -11 603 208 6 64 chr10 84411246 84411290 -55905475 + MIR SINE MIR 191 236 -26 265 284 180 21 chr10 84411364 84411558 -55905207 + L1MC4a LINE L1 5709 5933 -1875 25 31 0 0 chr10 84411635 84411667 -55905098 + AT_rich Low_complexity Low_complexity 1 32 0 876 156 0 0 chr10 84411672 84411800 -55904965 - AluJb SINE Alu -184 128 1 2167 153 25 35 chr10 84411958 84412358 -55904407 - MSTD LTR MaLR 0 396 1 1201 212 68 96 chr10 84412408 84412538 -55904227 - MER39 LTR ERV1 -45 662 530 1954 159 0 3 chr10 84412538 84412839 -55903926 + AluJb SINE Alu 10 309 -3 1201 212 68 96 chr10 84412839 84413123 -55903642 - MER39 LTR ERV1 -177 530 260 288 184 71 51 chr10 84413097 84413195 -55903570 - LTR48B LTR ERV1 -544 100 1 * 22 106 0 0 chr10 84413302 84413387 -55903378 + AT_rich Low_complexity Low_complexity 1 85 0 29 28 0 0 chr10 84413455 84413491 -55903274 + AT_rich Low_complexity Low_complexity 1 36 0 630 256 51 34 chr10 84414464 84414698 -55902067 + L1MC/D LINE L1 5515 5752 -2056 274 281 31 0 chr10 84415055 84415151 -55901614 + L1ME3A LINE L1 69 167 -5952 4132 122 8 12 chr10 84415390 84415935 -55900830 + MER41B LTR ERV1 1 544 -91 3996 82 24 0 chr10 84415935 84416474 -55900291 - MER41A LTR ERV1 0 554 3 4132 122 8 12 chr10 84416474 84416566 -55900199 + MER41B LTR ERV1 544 635 0 426 309 62 44 chr10 84417204 84417723 -55899042 + L1ME3A LINE L1 944 1486 -4824 201 39 0 0 chr10 84417723 84417749 -55899016 + (CA)n Simple_repeat Simple_repeat 1 26 0 426 309 62 44 chr10 84417749 84417902 -55898863 + L1ME3A LINE L1 1486 1635 -4675 1015 280 78 37 chr10 84417990 84418718 -55898047 + L1ME3A LINE L1 1792 2513 -3616 23 0 0 0 chr10 84418720 84418743 -55898022 + AT_rich Low_complexity Low_complexity 1 23 0 6741 205 43 26 chr10 84418975 84420101 -55896664 - ERVL LTR ERVL -983 4781 3623 196 51 26 26 chr10 84420101 84420140 -55896625 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6741 205 43 26 chr10 84420140 84420470 -55896295 - ERVL LTR ERVL -2141 3623 3300 1532 195 92 26 chr10 84420470 84420819 -55895946 - MLT1D LTR MaLR -133 372 1 1409 256 139 31 chr10 84420819 84421754 -55895011 + L1ME3A LINE L1 4071 4904 -1225 2153 117 3 3 chr10 84421754 84422053 -55894712 + AluSx SINE Alu 1 299 -13 15266 130 30 51 chr10 84422061 84423973 -55892792 - Tigger2 DNA MER2_type 0 2718 882 2062 99 35 3 chr10 84423973 84424256 -55892509 + AluSx SINE Alu 1 292 -20 15266 130 30 51 chr10 84424256 84425119 -55891646 - Tigger2 DNA MER2_type -1836 882 2 1409 256 139 31 chr10 84425119 84425199 -55891566 + L1ME3A LINE L1 4910 5211 -918 964 281 65 11 chr10 84425195 84425648 -55891117 + L1M1 LINE L1 5258 5725 -471 * 1144 224 75 59 chr10 84425900 84426356 -55890409 - MLT1C LTR MaLR 0 467 5 2781 13 0 10 chr10 84426709 84427023 -55889742 - AluYa5 SINE Alu 0 311 1 930 252 20 8 chr10 84427694 84427940 -55888825 + L1ME3A LINE L1 5669 5917 -236 1226 216 49 4 chr10 84427966 84428211 -55888554 + LTR47B LTR ERVL 188 443 0 7890 215 57 63 chr10 84428211 84431214 -55885551 - L1MB8 LINE L1 -134 6044 2953 681 190 16 0 chr10 84431214 84431335 -55885430 - AluJb SINE Alu -189 123 1 7890 215 57 63 chr10 84431335 84431842 -55884923 - L1MB8 LINE L1 -3225 2953 2445 1443 170 34 34 chr10 84431871 84432165 -55884600 - AluJo SINE Alu -5 307 14 224 179 0 0 chr10 84432217 84432256 -55884509 + MIR SINE MIR 117 155 -107 24 0 0 0 chr10 84435322 84435346 -55881419 + AT_rich Low_complexity Low_complexity 1 24 0 2055 128 0 0 chr10 84436089 84436385 -55880380 - AluSc SINE Alu -13 296 1 859 249 0 34 chr10 84437559 84437768 -55878997 - MER58A DNA MER1_type -1 223 22 234 238 12 36 chr10 84437931 84438015 -55878750 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 212 264 0 0 chr10 84438020 84438073 -55878692 + L2 LINE L2 3258 3310 -3 192 222 99 25 chr10 84438061 84438142 -55878623 + L2 LINE L2 2394 2480 -834 * 14256 176 37 36 chr10 84439179 84439529 -55877236 - L1PB4 LINE L1 0 6872 6524 1171 9 42 5 chr10 84439529 84439742 -55877023 + (TCTA)n Simple_repeat Simple_repeat 1 221 0 14256 176 37 36 chr10 84439742 84443121 -55873644 - L1PB4 LINE L1 -348 6524 2998 2322 113 3 0 chr10 84443121 84443431 -55873334 - AluSx SINE Alu -1 311 1 14256 176 37 36 chr10 84443431 84445767 -55870998 - L1PB4 LINE L1 -3874 2998 666 1185 148 0 15 chr10 84445770 84445972 -55870793 - L1PB4 LINE L1 -6663 200 2 532 271 28 22 chr10 84446474 84446655 -55870110 - MER5A DNA MER1_type -1 188 7 182 292 21 0 chr10 84448774 84448822 -55867943 - L2 LINE L2 -16 3256 3208 189 0 0 0 chr10 84449153 84449174 -55867591 + (TA)n Simple_repeat Simple_repeat 2 22 0 2818 10 0 0 chr10 84449174 84449480 -55867285 - AluY SINE Alu -5 306 1 247 283 54 36 chr10 84449497 84449663 -55867102 + L1ME1 LINE L1 5804 5975 -195 224 283 71 26 chr10 84450019 84450132 -55866633 + MIR SINE MIR 27 144 -64 337 353 77 14 chr10 84450642 84450863 -55865902 + L2 LINE L2 880 1114 -2200 192 250 62 0 chr10 84450882 84450930 -55865835 - L2 LINE L2 -336 2977 2927 1227 167 62 40 chr10 84450931 84451207 -55865558 + LTR52 LTR ERVL 138 419 -2 249 394 14 7 chr10 84451302 84451444 -55865321 - L2 LINE L2 -609 2705 2563 516 227 7 58 chr10 84451478 84451632 -55865133 - L2 LINE L2 -905 2409 2264 1614 148 17 0 chr10 84451764 84452061 -55864704 - L1MA9 LINE L1 0 6312 6011 348 24 0 0 chr10 84452715 84452756 -55864009 + (TG)n Simple_repeat Simple_repeat 1 41 0 7268 44 1 9 chr10 84453479 84454498 -55862267 + L1PA5 LINE L1 5143 6154 0 322 337 51 0 chr10 84454570 84454668 -55862097 + L2 LINE L2 3161 3263 -9 25 0 0 0 chr10 84454715 84454740 -55862025 + AT_rich Low_complexity Low_complexity 1 25 0 2334 148 35 9 chr10 84454758 84455192 -55861573 - L1PA15 LINE L1 -2 6163 5719 2120 161 39 24 chr10 84455192 84455608 -55861157 + Tigger2a DNA MER2_type 13 434 0 2056 154 0 0 chr10 84456005 84456310 -55860455 - AluSx SINE Alu -7 305 1 357 264 11 0 chr10 84456481 84456572 -55860193 - MER94 DNA DNA -40 94 3 1713 243 85 81 chr10 84456955 84457322 -55859443 + L1ME LINE L1 26 390 -5690 231 36 0 0 chr10 84457322 84457350 -55859415 + (GA)n Simple_repeat Simple_repeat 2 29 0 1713 243 85 81 chr10 84457350 84458103 -55858662 + L1ME LINE L1 390 1103 -4977 507 261 172 0 chr10 84459044 84459178 -55857587 + MER5A DNA MER1_type 33 189 0 180 152 0 0 chr10 84459777 84459810 -55856955 + (CA)n Simple_repeat Simple_repeat 2 34 0 2668 224 82 22 chr10 84460842 84461578 -55855187 - MER21B LTR ERV1 -64 799 20 850 282 123 44 chr10 84462392 84462896 -55853869 + MLT1H LTR MaLR 1 544 -5 21 0 0 0 chr10 84463388 84463409 -55853356 + AT_rich Low_complexity Low_complexity 1 21 0 197 81 0 27 chr10 84463748 84463785 -55852980 + (TG)n Simple_repeat Simple_repeat 1 36 0 209 105 0 26 chr10 84463797 84463835 -55852930 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 196 340 0 0 chr10 84464538 84464591 -55852174 + L2 LINE L2 2246 2298 -1016 893 291 58 21 chr10 84464676 84465057 -55851708 + L1ME3A LINE L1 5318 5712 -450 962 173 11 17 chr10 84465065 84465244 -55851521 - Tigger2 DNA MER2_type -10 2708 2531 566 343 50 24 chr10 84465247 84465629 -55851136 + L1ME3A LINE L1 5720 6111 -59 1675 235 174 23 chr10 84465703 84466029 -55850736 - MER97b DNA MER1_type? -53 841 565 1901 155 14 70 chr10 84466029 84466442 -55850323 - MLT1B LTR MaLR 0 390 1 1675 235 174 23 chr10 84466442 84466846 -55849919 - MER97b DNA MER1_type? -329 565 1 2245 160 56 17 chr10 84467133 84467545 -55849220 + MSTA LTR MaLR 1 428 0 1095 185 38 0 chr10 84467948 84468159 -55848606 + MER20 DNA MER1_type 1 219 0 186 43 0 0 chr10 84468185 84468208 -55848557 + (A)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr10 84468225 84468265 -55848500 + AT_rich Low_complexity Low_complexity 1 40 0 15826 157 23 7 chr10 84469082 84471891 -55844874 + L1M1 LINE L1 53 2905 -4660 2436 65 0 0 chr10 84471891 84472182 -55844583 + AluY SINE Alu 1 291 -20 318 26 0 0 chr10 84472199 84472238 -55844527 + (CA)n Simple_repeat Simple_repeat 2 40 0 1160 101 19 0 chr10 84472238 84472396 -55844369 + AluSq SINE Alu 130 290 -23 308 278 79 16 chr10 84473223 84473349 -55843416 + MIR SINE MIR 16 149 -59 272 280 131 9 chr10 84473767 84473874 -55842891 + L1ME3A LINE L1 5602 5721 -449 962 173 11 17 chr10 84473874 84474053 -55842712 - Tigger2 DNA MER2_type -10 2708 2531 566 343 50 24 chr10 84474056 84474438 -55842327 + L1ME3A LINE L1 5720 6111 -59 1675 235 174 23 chr10 84474512 84474838 -55841927 - MER97c DNA MER1_type? -53 841 565 1885 157 14 70 chr10 84474838 84475251 -55841514 - MLT1B LTR MaLR 0 390 1 1675 235 174 23 chr10 84475251 84475655 -55841110 - MER97c DNA MER1_type? -329 565 1 2245 160 56 17 chr10 84475942 84476354 -55840411 + MSTA LTR MaLR 1 428 0 1095 185 38 0 chr10 84476757 84476968 -55839797 + MER20 DNA MER1_type 1 219 0 186 43 0 0 chr10 84476994 84477017 -55839748 + (A)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr10 84477034 84477074 -55839691 + AT_rich Low_complexity Low_complexity 1 40 0 16764 152 22 12 chr10 84477891 84480700 -55836065 + L1M1 LINE L1 53 2898 -4667 2327 67 0 3 chr10 84480700 84481023 -55835742 + AluY SINE Alu 1 322 0 16764 152 22 12 chr10 84481023 84481210 -55835555 + L1M1 LINE L1 2898 3082 -4483 2359 87 0 3 chr10 84481218 84481552 -55835213 + L1MA2 LINE L1 5446 5778 -526 7021 56 6 0 chr10 84481552 84482925 -55833840 + L1PA6 LINE L1 4777 6151 -3 2900 119 21 69 chr10 84482925 84483480 -55833285 + L1MA2 LINE L1 5769 6304 0 1684 187 54 9 chr10 84483511 84483843 -55832922 + MER7A DNA MER2_type 2 346 0 1527 175 38 35 chr10 84483893 84484259 -55832506 - Tigger7 DNA MER2_type 0 2587 2221 500 260 18 26 chr10 84484255 84484480 -55832285 - Tigger7 DNA MER2_type -434 299 1 * 25 0 0 0 chr10 84484497 84484522 -55832243 + AT_rich Low_complexity Low_complexity 1 25 0 5108 172 20 63 chr10 84484681 84485203 -55831562 + L1PA16 LINE L1 1 526 -6323 476 77 0 0 chr10 84485203 84485268 -55831497 - THE1B LTR MaLR -204 160 96 5108 172 20 63 chr10 84485268 84485714 -55831051 + L1PA16 LINE L1 526 989 -5860 2504 155 22 20 chr10 84485702 84486087 -55830678 + L1PA16 LINE L1 1492 1875 -4974 * 2284 132 22 25 chr10 84486087 84486452 -55830313 - THE1B LTR MaLR 0 364 1 11342 94 15 13 chr10 84486452 84488029 -55828736 - THE1B-int LTR MaLR -1 1579 1 1894 124 72 66 chr10 84488029 84488391 -55828374 - THE1B LTR MaLR 0 364 1 2504 155 22 20 chr10 84488391 84488505 -55828260 + L1PA16 LINE L1 1874 1994 -4855 * 11464 201 21 21 chr10 84488483 84489860 -55826905 + L1PA16 LINE L1 2827 4202 -2667 1929 176 0 0 chr10 84489860 84490162 -55826603 + AluJb SINE Alu 1 302 -10 11464 201 21 21 chr10 84490162 84492758 -55824007 + L1PA16 LINE L1 4202 6800 -69 298 291 19 10 chr10 84493181 84493284 -55823481 - MIR SINE MIR -122 140 37 3793 176 57 18 chr10 84494157 84495047 -55821718 + L1MC3 LINE L1 6861 7785 0 1130 255 52 0 chr10 84495043 84495511 -55821254 + L1ME1 LINE L1 2501 2998 -3542 * 402 295 110 62 chr10 84495619 84496272 -55820493 - L1M2 LINE L1 -5461 1388 832 4703 258 58 24 chr10 84496276 84498277 -55818488 + L1ME1 LINE L1 2900 4968 -1572 303 28 0 0 chr10 84498617 84498653 -55818112 + (CAT)n Simple_repeat Simple_repeat 1 36 0 30 69 0 0 chr10 84498915 84498973 -55817792 + AT_rich Low_complexity Low_complexity 1 58 0 1101 215 36 20 chr10 84501030 84501332 -55815433 - HsTC2 DNA Tc2 0 1899 1593 322 327 20 13 chr10 84501412 84501562 -55815203 - HsTC2 DNA Tc2 -1747 151 1 252 215 0 15 chr10 84501858 84501923 -55814842 - Charlie7 DNA MER1_type -2512 100 37 21 0 0 0 chr10 84502829 84502850 -55813915 + AT_rich Low_complexity Low_complexity 1 21 0 2259 133 5 16 chr10 84502863 84503238 -55813527 - L1PA13 LINE L1 -4 6159 5789 10432 173 19 20 chr10 84503238 84505280 -55811485 - L1PA13 LINE L1 -807 5339 3300 459 298 119 40 chr10 84505658 84506011 -55810754 + L1MEd LINE L1 12 392 -5727 320 102 11 159 chr10 84506604 84506692 -55810073 + MADE1 DNA Mariner 2 76 -4 284 224 0 94 chr10 84507019 84507104 -55809661 + HAL1 LINE L1 1570 1646 -861 328 328 79 45 chr10 84507531 84507821 -55808944 - L1M4 LINE L1 -905 5241 4942 641 296 84 11 chr10 84508718 84508992 -55807773 - L1MEc LINE L1 -6029 367 74 2392 199 70 64 chr10 84509056 84509235 -55807530 + L1ME1 LINE L1 5016 5192 -1380 2036 129 0 3 chr10 84509235 84509550 -55807215 - AluSq SINE Alu 0 314 1 2392 199 70 64 chr10 84509550 84510612 -55806153 + L1ME1 LINE L1 5192 6266 -306 6220 82 17 2 chr10 84510612 84511502 -55805263 + L1PB1 LINE L1 4885 5796 -355 297 0 0 0 chr10 84511502 84511535 -55805230 + (TG)n Simple_repeat Simple_repeat 2 34 0 6220 82 17 2 chr10 84511535 84511896 -55804869 + L1PB1 LINE L1 5796 6150 -1 675 242 83 62 chr10 84511970 84512259 -55804506 + L1ME1 LINE L1 6256 6550 -10 852 158 0 0 chr10 84514565 84514698 -55802067 + AluSq/x SINE Alu 1 133 -179 375 229 57 129 chr10 84514822 84515102 -55801663 - L1M4 LINE L1 -2157 3989 3730 319 288 18 9 chr10 84516747 84516858 -55799907 - L1MC4 LINE L1 -27 8015 7904 797 220 14 79 chr10 84516993 84517117 -55799648 - L1ME2 LINE L1 -1 6163 6032 1452 203 138 10 chr10 84517117 84517531 -55799234 - MLT1C LTR MaLR 0 467 1 797 220 14 79 chr10 84517531 84517697 -55799068 - L1ME2 LINE L1 -132 6032 5892 311 229 107 30 chr10 84517740 84517871 -55798894 - LTR67 LTR ERVL -4 553 413 758 340 72 31 chr10 84518066 84518578 -55798187 - LTR67 LTR ERVL -1 556 24 54 16 0 0 chr10 84519112 84519173 -55797592 + AT_rich Low_complexity Low_complexity 1 61 0 1896 195 29 0 chr10 84519922 84520307 -55796458 - MER63 DNA MER1_type 0 1060 665 4788 161 20 41 chr10 84520379 84521556 -55795209 - L1MB3 LINE L1 0 6183 5030 423 320 85 28 chr10 84521672 84521725 -55795040 - HERVL LTR ERVL -1352 4302 4253 1505 244 75 29 chr10 84521725 84522208 -55794557 + MLT1D LTR MaLR 1 505 0 423 320 85 28 chr10 84522208 84522401 -55794364 - HERVL LTR ERVL -1401 4253 4042 823 188 37 87 chr10 84522724 84522942 -55793823 + MER58C DNA MER1_type 9 215 0 850 250 123 54 chr10 84523108 84523230 -55793535 + MLT1F1 LTR MaLR 2 114 -453 240 86 0 0 chr10 84523230 84523265 -55793500 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 850 250 123 54 chr10 84523265 84523463 -55793302 + MLT1F1 LTR MaLR 114 297 -270 1891 57 8 23 chr10 84523463 84523727 -55793038 + L1PA4 LINE L1 5896 6155 0 850 250 123 54 chr10 84523727 84523920 -55792845 + MLT1F1 LTR MaLR 297 565 -2 646 372 53 16 chr10 84523965 84524399 -55792366 - HERVL LTR ERVL -2711 3053 2589 195 42 0 0 chr10 84524399 84524423 -55792342 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 646 372 53 16 chr10 84524423 84524593 -55792172 - HERVL LTR ERVL -3175 2589 2427 219 154 0 0 chr10 84524608 84524647 -55792118 + (TA)n Simple_repeat Simple_repeat 2 40 0 329 268 29 86 chr10 84524753 84524786 -55791979 + L1ME4a LINE L1 5622 5655 -466 1740 194 0 7 chr10 84524786 84525090 -55791675 + AluJb SINE Alu 2 303 -9 329 268 29 86 chr10 84525090 84525299 -55791466 + L1ME4a LINE L1 5655 5850 -271 634 124 0 0 chr10 84525300 84525397 -55791368 + AluSg/x SINE Alu 216 312 0 208 246 16 0 chr10 84526321 84526382 -55790383 + (TTCA)n Simple_repeat Simple_repeat 3 64 0 472 301 70 32 chr10 84526456 84526642 -55790123 + MIR3 SINE MIR 5 197 -11 535 322 11 11 chr10 84527105 84527288 -55789477 - MER5A DNA MER1_type 0 189 7 303 255 96 0 chr10 84528117 84528211 -55788554 - L2 LINE L2 -29 3243 3141 389 161 0 0 chr10 84528333 84528395 -55788370 - AluJo/FRAM SINE Alu -36 266 205 287 241 0 0 chr10 84528379 84528433 -55788332 - AluSc SINE Alu -113 186 133 * 315 260 0 0 chr10 84528621 84528698 -55788067 - L2 LINE L2 -712 2602 2526 681 274 43 25 chr10 84528861 84529213 -55787552 + MLT1I LTR MaLR 21 409 0 283 247 81 90 chr10 84529425 84529648 -55787117 + LTR67 LTR ERVL 327 547 -10 263 261 159 11 chr10 84529656 84529744 -55787021 - L2 LINE L2 -981 2333 2233 3408 198 29 7 chr10 84531063 84531756 -55785009 - L1MB3 LINE L1 -2 6417 5704 480 48 0 0 chr10 84531756 84531819 -55784946 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 3408 198 29 7 chr10 84531819 84531873 -55784892 - L1MB3 LINE L1 -715 5704 5653 8489 259 47 10 chr10 84531973 84534848 -55781917 - L1MB3 LINE L1 -806 5576 2597 15780 237 34 35 chr10 84534852 84540020 -55776745 - L1PA15 LINE L1 -8 7595 2457 1797 82 16 43 chr10 84540020 84540312 -55776453 - AluSq SINE Alu 0 321 37 15780 237 34 35 chr10 84540312 84542763 -55774002 - L1PA15 LINE L1 -5146 2457 6 1332 181 34 2 chr10 84542776 84543174 -55773591 - L1MB3 LINE L1 -3775 2607 2199 2355 176 26 100 chr10 84543175 84543855 -55772910 - L1MA9 LINE L1 -37 6275 5646 1307 198 18 12 chr10 84543852 84544313 -55772452 - L1MB3 LINE L1 -4174 2210 1654 * 4552 149 51 54 chr10 84544324 84544486 -55772279 - L1MC1 LINE L1 -1 6332 6171 2055 127 0 0 chr10 84544486 84544769 -55771996 + AluSx SINE Alu 1 283 -29 4552 149 51 54 chr10 84544769 84545552 -55771213 - L1MC1 LINE L1 -162 6171 5390 2565 98 3 3 chr10 84545573 84545941 -55770824 - L1PB1 LINE L1 -2 6865 6498 34 0 0 0 chr10 84545952 84545986 -55770779 + AT_rich Low_complexity Low_complexity 1 34 0 14687 179 58 5 chr10 84545988 84546020 -55770745 - L1PB1 LINE L1 -360 6507 6478 225 0 0 0 chr10 84546020 84546045 -55770720 + (ATTG)n Simple_repeat Simple_repeat 3 27 0 14687 179 58 5 chr10 84546045 84552182 -55764583 - L1PB1 LINE L1 -389 6478 6 4050 147 36 5 chr10 84552201 84552954 -55763811 - L1MA5 LINE L1 -2 6298 5523 1200 244 58 8 chr10 84552955 84553336 -55763429 - L1MC1 LINE L1 -751 5395 4996 303 111 63 32 chr10 84553413 84553476 -55763289 - L1MC1 LINE L1 -1601 4545 4481 244 200 0 0 chr10 84553474 84553519 -55763246 - L1M4c LINE L1 -4706 1678 1634 * 1505 172 68 52 chr10 84553498 84553806 -55762959 - L1M4c LINE L1 -6043 341 29 499 305 41 22 chr10 84553937 84554304 -55762461 - L1MC1 LINE L1 -1944 4202 3829 5443 152 80 5 chr10 84554476 84555619 -55761146 - L1PA16 LINE L1 0 6166 4890 330 87 0 0 chr10 84556482 84556528 -55760237 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 27 0 0 0 chr10 84557071 84557098 -55759667 + AT_rich Low_complexity Low_complexity 1 27 0 243 335 16 44 chr10 84557226 84557367 -55759398 + MIR SINE MIR 20 154 -91 2183 93 3 13 chr10 84557658 84557959 -55758806 + AluY SINE Alu 1 298 -13 2013 102 0 8 chr10 84558212 84558477 -55758288 + AluSg SINE Alu 35 297 -13 722 221 81 118 chr10 84559339 84559823 -55756942 + LTR37B LTR ERV1 1 466 -2 364 321 52 32 chr10 84561466 84561660 -55755105 + MIR SINE MIR 3 198 -64 1191 188 96 12 chr10 84562845 84563281 -55753484 - LTR54 LTR ERV1 -3 400 1 180 308 94 51 chr10 84563438 84563555 -55753210 + L2 LINE L2 3151 3272 0 393 141 0 0 chr10 84564108 84564179 -55752586 + (CA)n Simple_repeat Simple_repeat 2 72 0 26 50 0 0 chr10 84564416 84564456 -55752309 + AT_rich Low_complexity Low_complexity 1 40 0 444 303 35 14 chr10 84564494 84564636 -55752129 - MIR SINE MIR -99 163 19 1508 240 60 22 chr10 84565047 84565225 -55751540 + MLT1C LTR MaLR 1 171 -296 1656 143 7 14 chr10 84565225 84565512 -55751253 + L1PA16 LINE L1 5873 6157 -9 1508 240 60 22 chr10 84565512 84565783 -55750982 + MLT1C LTR MaLR 171 467 0 646 201 13 0 chr10 84565930 84566079 -55750686 + L1MA10 LINE L1 6180 6330 -4 2152 83 0 21 chr10 84566505 84566793 -55749972 + AluSg SINE Alu 17 298 -12 288 309 123 43 chr10 84566941 84567103 -55749662 - MER5B DNA MER1_type 0 178 4 253 297 8 0 chr10 84569054 84569172 -55747593 - L1ME LINE L1 -297 5824 5706 2229 115 3 3 chr10 84569296 84569601 -55747164 + AluSx SINE Alu 6 310 -2 454 343 78 25 chr10 84569752 84569902 -55746863 - L2 LINE L2 -3 3310 3169 2634 97 24 16 chr10 84569902 84570274 -55746491 - THE1C LTR MaLR 0 375 1 454 343 78 25 chr10 84570274 84570406 -55746359 - L2 LINE L2 -144 3169 3013 182 388 20 20 chr10 84570447 84570599 -55746166 - L2 LINE L2 -414 2900 2749 21 36 0 0 chr10 84570801 84570829 -55745936 + AT_rich Low_complexity Low_complexity 1 28 0 758 284 14 3 chr10 84570850 84571135 -55745630 - L1M4 LINE L1 -3573 2573 2286 2491 65 0 7 chr10 84571261 84571571 -55745194 - AluY SINE Alu -3 308 1 25 31 0 0 chr10 84571912 84571944 -55744821 + AT_rich Low_complexity Low_complexity 1 32 0 2178 92 0 16 chr10 84572199 84572502 -55744263 - AluY SINE Alu -13 298 1 262 328 55 31 chr10 84572616 84572744 -55744021 - MIR SINE MIR -61 201 71 2178 116 0 0 chr10 84572780 84573072 -55743693 - AluSx SINE Alu -14 298 7 210 176 12 82 chr10 84573078 84573163 -55743602 + T-rich Low_complexity Low_complexity 2 80 0 537 207 180 0 chr10 84573179 84573329 -55743436 - L1MB2 LINE L1 -8 6163 5987 1931 159 0 0 chr10 84573583 84573872 -55742893 - AluJb SINE Alu -23 289 1 278 259 43 17 chr10 84574476 84574592 -55742173 - Charlie7 DNA MER1_type -1 2611 2493 356 277 0 0 chr10 84574742 84574825 -55741940 + L2 LINE L2 3184 3266 -6 1386 127 72 104 chr10 84575998 84576344 -55740421 - MER1B DNA MER1_type 0 337 3 342 162 222 0 chr10 84576484 84576583 -55740182 - MER1B DNA MER1_type -174 123 3 1090 296 96 34 chr10 84576658 84577442 -55739323 - L1MC4 LINE L1 -18 8024 7193 292 331 86 53 chr10 84577472 84577831 -55738934 - L2 LINE L2 0 3313 2943 273 312 19 70 chr10 84577805 84577962 -55738803 - L2 LINE L2 -570 2744 2596 * 202 209 0 0 chr10 84578192 84578235 -55738530 + (TG)n Simple_repeat Simple_repeat 1 43 0 2079 135 0 0 chr10 84579277 84579574 -55737191 - AluSx SINE Alu -15 297 1 180 111 0 0 chr10 84580306 84580333 -55736432 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 198 0 0 0 chr10 84580332 84580354 -55736411 + (GA)n Simple_repeat Simple_repeat 2 23 0 319 306 38 45 chr10 84580973 84581130 -55735635 - MIR SINE MIR -3 259 104 240 250 0 0 chr10 84581703 84581751 -55735014 - MER91 DNA MER1_type -10 186 139 288 232 127 66 chr10 84581924 84582105 -55734660 - L2 LINE L2 -11 3302 3111 22 56 0 0 chr10 84582172 84582208 -55734557 + AT_rich Low_complexity Low_complexity 1 36 0 617 197 129 11 chr10 84582289 84582360 -55734405 + MER3 DNA MER1_type 11 72 -137 1028 32 0 0 chr10 84582360 84582485 -55734280 + L1PA13 LINE L1 6026 6150 -13 617 197 129 11 chr10 84582485 84582591 -55734174 + MER3 DNA MER1_type 72 209 0 371 278 53 41 chr10 84583804 84583973 -55732792 + L1M4 LINE L1 3090 3260 -2886 25 31 0 0 chr10 84584681 84584713 -55732052 + AT_rich Low_complexity Low_complexity 1 32 0 1279 274 95 22 chr10 84584851 84584990 -55731775 - MLT1G LTR MaLR -19 571 444 1334 215 63 23 chr10 84584990 84585339 -55731426 - MLT1A1 LTR MaLR -2 363 1 1279 274 95 22 chr10 84585339 84585652 -55731113 - MLT1G LTR MaLR -146 444 86 407 297 49 58 chr10 84585860 84586264 -55730501 + L1 LINE L1 2596 3003 -3143 203 0 37 0 chr10 84586344 84586371 -55730394 + (TCTA)n Simple_repeat Simple_repeat 2 29 0 443 278 147 38 chr10 84586760 84587026 -55729739 + MLT1L LTR MaLR 156 450 -165 253 335 135 12 chr10 84587961 84588131 -55728634 + MLT1I LTR MaLR 198 388 -21 468 294 58 58 chr10 84588286 84588789 -55727976 + L1MEd LINE L1 706 1208 -4911 212 200 18 0 chr10 84588859 84588914 -55727851 + GA-rich Low_complexity Low_complexity 1 56 0 252 309 68 99 chr10 84589022 84589137 -55727628 - L2 LINE L2 0 3313 3196 2357 97 0 0 chr10 84589137 84589436 -55727329 - AluSx SINE Alu -13 299 1 252 309 68 99 chr10 84589436 84589573 -55727192 - L2 LINE L2 -117 3196 3073 1076 165 45 0 chr10 84589573 84589714 -55727051 - L1MA9 LINE L1 -1 6311 6155 186 71 0 0 chr10 84589714 84589742 -55727023 + (TG)n Simple_repeat Simple_repeat 1 28 0 1076 165 45 0 chr10 84589742 84589824 -55726941 - L1MA9 LINE L1 -157 6155 6078 252 309 68 99 chr10 84589824 84589923 -55726842 - L2 LINE L2 -240 3073 2972 25 31 0 0 chr10 84590195 84590227 -55726538 + AT_rich Low_complexity Low_complexity 1 32 0 607 348 107 31 chr10 84590354 84590708 -55726057 - MLT1K LTR MaLR -105 483 103 403 87 159 0 chr10 84590746 84590815 -55725950 + MADE1 DNA Mariner 1 80 0 208 114 0 45 chr10 84592494 84592538 -55724227 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1406 251 79 40 chr10 84593048 84593518 -55723247 - LTR16C LTR ERVL -3 488 1 247 170 40 0 chr10 84593577 84593651 -55723114 + L1ME LINE L1 5707 5785 -379 29 47 0 0 chr10 84593953 84593996 -55722769 + AT_rich Low_complexity Low_complexity 1 43 0 2326 84 0 3 chr10 84596144 84596442 -55720323 - AluY SINE Alu -14 297 1 2768 104 12 5 chr10 84596447 84596851 -55719914 - L1PA11 LINE L1 -7 6167 5761 563 175 10 0 chr10 84596890 84596987 -55719778 - AluJb SINE Alu -106 206 109 785 93 0 0 chr10 84596988 84597095 -55719670 - L1PA11 LINE L1 -421 5747 5641 * 5879 158 38 22 chr10 84597094 84598249 -55718516 + L1P LINE L1 2126 3298 -2848 4064 139 45 63 chr10 84598250 84599049 -55717716 + LTR1 LTR ERV1 1 785 0 6199 127 22 0 chr10 84599049 84600032 -55716733 + L1P LINE L1 3296 4300 -1846 252 0 0 0 chr10 84600033 84600061 -55716704 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1588 170 37 0 chr10 84600063 84600333 -55716432 - AluJb SINE Alu -32 280 1 319 169 13 13 chr10 84600624 84600701 -55716064 + CT-rich Low_complexity Low_complexity 3 79 0 308 297 44 0 chr10 84600923 84601014 -55715751 - L1 LINE L1 -2382 3764 3670 29 0 0 0 chr10 84601429 84601458 -55715307 + AT_rich Low_complexity Low_complexity 1 29 0 213 206 22 43 chr10 84601524 84601616 -55715149 + A-rich Low_complexity Low_complexity 2 91 0 547 126 37 60 chr10 84602247 84602392 -55714373 + MIR SINE MIR 61 198 -61 23 33 0 0 chr10 84603846 84603876 -55712889 + AT_rich Low_complexity Low_complexity 1 30 0 258 279 29 29 chr10 84604627 84604731 -55712034 + L1ME LINE L1 5370 5473 -648 1824 159 37 76 chr10 84604794 84605229 -55711536 + MSTB LTR MaLR 9 426 0 847 185 85 0 chr10 84605390 84605579 -55711186 + MER3 DNA MER1_type 5 209 0 228 318 0 0 chr10 84605588 84605651 -55711114 + L2 LINE L2 102 164 -3150 327 318 137 56 chr10 84605652 84606083 -55710682 + L2 LINE L2 1477 1942 -1372 507 319 90 85 chr10 84606800 84607568 -55709197 + L1M4 LINE L1 3567 4338 -1808 258 263 44 26 chr10 84607755 84607869 -55708896 + L1M4 LINE L1 4612 4727 -1419 23 78 0 0 chr10 84609530 84609581 -55707184 + AT_rich Low_complexity Low_complexity 1 51 0 2403 269 54 35 chr10 84609799 84611465 -55705300 + L1MCa LINE L1 1597 3435 -2991 552 217 125 0 chr10 84611475 84611595 -55705170 - MER58B DNA MER1_type 0 341 207 1749 272 42 57 chr10 84611600 84611829 -55704936 + L1MCa LINE L1 3471 3702 -2724 2332 92 0 0 chr10 84611829 84612132 -55704633 + AluSx SINE Alu 1 303 -9 1749 272 42 57 chr10 84612132 84612763 -55704002 + L1MCa LINE L1 3702 4318 -2108 457 369 53 0 chr10 84612977 84613164 -55703601 - MIR SINE MIR -32 230 34 463 246 165 40 chr10 84614050 84614298 -55702467 - L1M4 LINE L1 -1304 4842 4564 1119 308 106 20 chr10 84614757 84616139 -55700626 + L1ME3A LINE L1 2453 3953 -2193 800 303 101 21 chr10 84616250 84616864 -55699901 + L1ME3A LINE L1 5274 5936 -234 1012 31 79 0 chr10 84617233 84617360 -55699405 - MER85 DNA T2_type -2 137 1 21 0 0 0 chr10 84617543 84617564 -55699201 + AT_rich Low_complexity Low_complexity 1 21 0 660 289 106 33 chr10 84618208 84618481 -55698284 + L2 LINE L2 3020 3312 -1 2319 85 10 3 chr10 84618739 84619045 -55697720 - AluSq SINE Alu -5 308 1 409 183 31 22 chr10 84621618 84621726 -55695039 - L1M4 LINE L1 -1143 5003 4896 2078 118 3 19 chr10 84622003 84622316 -55694449 - AluSx SINE Alu 0 312 5 705 179 63 53 chr10 84623120 84623327 -55693438 - MER3 DNA MER1_type 0 209 1 1943 98 22 0 chr10 84623385 84623548 -55693217 - AluSx SINE Alu -13 299 126 195 42 0 0 chr10 84623548 84623572 -55693193 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1943 98 22 0 chr10 84623572 84623685 -55693080 - AluSx SINE Alu -186 126 17 1591 215 45 8 chr10 84624064 84624445 -55692320 + MSTD LTR MaLR 1 395 -1 617 239 8 0 chr10 84624714 84624858 -55691907 - FLAM_A SINE Alu 0 145 1 437 78 0 0 chr10 84625123 84625187 -55691578 - L1MA3 LINE L1 -7 6298 6235 4056 251 60 12 chr10 84625445 84626335 -55690430 - L1MB7 LINE L1 -16 6168 5322 669 11 33 0 chr10 84626335 84626425 -55690340 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 4056 251 60 12 chr10 84626425 84628275 -55688490 - L1MB7 LINE L1 -862 5322 3089 347 219 87 104 chr10 84628581 84628869 -55687896 - L1MC/D LINE L1 -771 5562 5296 489 311 88 62 chr10 84629071 84629602 -55687163 - L1MC/D LINE L1 -1112 5034 4490 528 293 113 14 chr10 84631159 84631381 -55685384 - MIR SINE MIR -10 252 9 207 149 21 21 chr10 84631589 84631636 -55685129 + CT-rich Low_complexity Low_complexity 3 49 0 576 220 34 85 chr10 84631711 84631821 -55684944 - L1MC5 LINE L1 -79 7882 7768 2161 99 27 0 chr10 84631821 84632115 -55684650 - AluSq SINE Alu -11 302 1 576 220 34 85 chr10 84632115 84632299 -55684466 - L1MC5 LINE L1 -193 7768 7603 2182 103 0 3 chr10 84633092 84633384 -55683381 - AluSg SINE Alu -16 294 4 24 0 0 0 chr10 84633398 84633422 -55683343 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 84633678 84633699 -55683066 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 84633841 84633866 -55682899 + AT_rich Low_complexity Low_complexity 1 25 0 1459 166 47 33 chr10 84633880 84634181 -55682584 - MER2 DNA MER2_type -39 306 2 255 61 0 0 chr10 84634198 84634231 -55682534 + (TG)n Simple_repeat Simple_repeat 2 34 0 2151 151 34 29 chr10 84635090 84635618 -55681147 - LTR10E LTR ERV1 -20 571 1 344 325 32 7 chr10 84635766 84635920 -55680845 + L1MEd LINE L1 916 1073 -5046 702 313 44 22 chr10 84635999 84636504 -55680261 + L1MEd LINE L1 1202 1717 -4593 21 0 0 0 chr10 84637406 84637427 -55679338 + AT_rich Low_complexity Low_complexity 1 21 0 804 249 94 114 chr10 84637441 84637986 -55678779 + MLT1H LTR MaLR 12 545 -4 283 247 0 41 chr10 84638005 84638102 -55678663 + L1ME LINE L1 812 904 -5301 333 248 34 81 chr10 84638110 84638450 -55678315 + L1ME LINE L1 1504 1665 -911 21 0 0 0 chr10 84638467 84638488 -55678277 + AT_rich Low_complexity Low_complexity 1 21 0 278 360 20 5 chr10 84638647 84638850 -55677915 + L1MEd LINE L1 3325 3530 -2599 229 256 56 38 chr10 84638893 84638973 -55677792 - MIR SINE MIR -63 145 105 181 292 0 0 chr10 84639412 84639460 -55677305 - L2 LINE L2 -1 3312 3265 1889 110 50 0 chr10 84639535 84639817 -55676948 - AluSg SINE Alu -14 296 1 2078 122 3 0 chr10 84639956 84640260 -55676505 + AluSx SINE Alu 1 305 -7 855 147 34 5 chr10 84640607 84640782 -55675983 + L1MB2 LINE L1 5991 6180 0 22 0 0 0 chr10 84641196 84641218 -55675547 + AT_rich Low_complexity Low_complexity 1 22 0 399 340 62 39 chr10 84641991 84642297 -55674468 - HAL1b LINE L1 -685 663 351 504 156 44 88 chr10 84642345 84642505 -55674260 - L1MA8 LINE L1 -12 6279 6127 613 207 71 45 chr10 84642542 84642740 -55674025 - L1MC5 LINE L1 -52 7909 7707 1627 193 86 5 chr10 84643021 84643430 -55673335 - L1MB8 LINE L1 -42 6136 5695 1416 225 84 22 chr10 84643434 84643593 -55673172 - L1MB8 LINE L1 -2712 3434 3286 378 91 0 0 chr10 84643593 84643648 -55673117 + (TG)n Simple_repeat Simple_repeat 2 56 0 1416 225 84 22 chr10 84643648 84644035 -55672730 - L1MB8 LINE L1 -2860 3286 2854 373 244 12 0 chr10 84644036 84644122 -55672643 - Tigger5 DNA MER2_type 0 2323 2237 320 200 0 0 chr10 84644132 84644187 -55672578 - Tigger5 DNA MER2_type -2268 55 1 817 184 83 47 chr10 84644187 84644465 -55672300 - L1MB8 LINE L1 -3292 2854 2567 180 0 0 0 chr10 84645073 84645093 -55671672 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr10 84645737 84645765 -55671000 + AT_rich Low_complexity Low_complexity 1 28 0 394 317 124 6 chr10 84646432 84646593 -55670172 + MIR SINE MIR 10 189 -73 26 88 0 0 chr10 84646624 84646692 -55670073 + AT_rich Low_complexity Low_complexity 1 68 0 297 289 35 0 chr10 84647008 84647150 -55669615 + L1M4 LINE L1 2148 2294 -3852 297 253 60 36 chr10 84647170 84647336 -55669429 + L1M4 LINE L1 2371 2540 -3606 207 383 54 13 chr10 84647347 84647496 -55669269 + L2 LINE L2 3158 3312 -1 25 99 0 0 chr10 84647590 84647671 -55669094 + AT_rich Low_complexity Low_complexity 1 81 0 27 0 0 0 chr10 84647894 84647921 -55668844 + AT_rich Low_complexity Low_complexity 1 27 0 2417 257 95 9 chr10 84647992 84649049 -55667716 + L1ME3A LINE L1 2139 3277 -2869 317 300 27 20 chr10 84649049 84649199 -55667566 + L1ME3A LINE L1 4518 4668 -1478 664 150 9 9 chr10 84649265 84649378 -55667387 + MER4D LTR ERV1 791 903 0 1695 218 32 11 chr10 84649382 84649753 -55667012 + MER4D-int LTR ERV1 6 384 -6374 * 3449 152 11 81 chr10 84649751 84650343 -55666422 + MER4D-int LTR ERV1 686 971 -5787 2157 113 3 0 chr10 84650343 84650643 -55666122 + AluSx SINE Alu 1 301 -11 3449 152 11 81 chr10 84650643 84651070 -55665695 + MER4D-int LTR ERV1 971 1426 -5332 2526 55 0 0 chr10 84651584 84651892 -55664873 + AluY SINE Alu 1 308 -3 3086 122 29 30 chr10 84652011 84652536 -55664229 - L1PA16 LINE L1 0 6166 5643 646 152 9 180 chr10 84652633 84652844 -55663921 + MER4D-int LTR ERV1 3779 3953 -4167 34 73 0 28 chr10 84652860 84652969 -55663796 + AT_rich Low_complexity Low_complexity 1 106 0 1977 183 32 8 chr10 84653127 84653504 -55663261 + MER4D-int LTR ERV1 5932 6317 -441 2057 135 57 16 chr10 84653612 84653983 -55662782 + MER4D-int LTR ERV1 6373 6758 0 4210 141 82 45 chr10 84653983 84654066 -55662699 + MER4D LTR ERV1 1 79 -793 492 72 0 0 chr10 84654066 84654135 -55662630 + (CA)n Simple_repeat Simple_repeat 2 70 0 4210 141 82 45 chr10 84654135 84654853 -55661912 + MER4D LTR ERV1 79 832 -40 2477 53 0 7 chr10 84654858 84655161 -55661604 - AluY SINE Alu -10 301 1 438 277 38 16 chr10 84655251 84655435 -55661330 + L1ME3A LINE L1 4883 5070 -1076 1942 143 32 40 chr10 84655507 84655885 -55660880 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr10 84655970 84655993 -55660772 + AT_rich Low_complexity Low_complexity 1 23 0 1033 268 73 32 chr10 84656094 84656601 -55660164 + L1ME3A LINE L1 5413 5940 -230 2151 104 7 3 chr10 84656870 84657167 -55659598 + AluSx SINE Alu 1 298 -14 333 309 112 8 chr10 84657289 84657538 -55659227 + L1ME3A LINE L1 5612 5886 -284 1821 180 39 0 chr10 84659237 84659571 -55657194 - MER7A DNA MER2_type -1 345 1 305 331 63 78 chr10 84660099 84660498 -55656267 + L1MEd LINE L1 402 794 -5325 2177 117 0 3 chr10 84660528 84660835 -55655930 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 84660944 84660965 -55655800 + AT_rich Low_complexity Low_complexity 1 21 0 2037 136 7 0 chr10 84661014 84661309 -55655456 + AluSx SINE Alu 1 297 -15 1942 169 72 36 chr10 84661319 84661856 -55654909 + MLT2A2 LTR ERVL 1 554 0 4688 106 3 6 chr10 84661856 84662525 -55654240 + HERVL-A2 LTR ERVL 1 667 -4987 * 5567 109 10 1 chr10 84662509 84663288 -55653477 + HERVL LTR ERVL 3750 4535 -1119 8337 82 6 21 chr10 84663327 84664469 -55652296 + HERVL LTR ERVL 4530 5654 0 601 212 106 17 chr10 84664469 84664498 -55652267 + Ricksha DNA DNA 336 380 -2866 2134 162 44 35 chr10 84664507 84665055 -55651710 + MLT2A2 LTR ERVL 1 554 0 465 306 26 33 chr10 84665063 84665334 -55651431 + L1MEd LINE L1 985 1253 -4866 1392 255 113 10 chr10 84665497 84666002 -55650763 + L1M4c LINE L1 1297 1853 -4531 1034 242 95 11 chr10 84666067 84666352 -55650413 - MER2 DNA MER2_type 0 345 37 10046 224 84 14 chr10 84666507 84669346 -55647419 + L1M4c LINE L1 2509 5546 -836 489 306 76 21 chr10 84671261 84671786 -55644979 - HAL1b LINE L1 -704 644 67 2271 132 95 16 chr10 84672880 84673485 -55643280 - MER39 LTR ERV1 0 707 1 1925 129 28 3 chr10 84673784 84674070 -55642695 - AluSx SINE Alu -12 300 8 29 60 0 0 chr10 84674080 84674130 -55642635 + AT_rich Low_complexity Low_complexity 1 50 0 315 0 0 0 chr10 84674484 84674519 -55642246 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1573 179 7 4 chr10 84674525 84674799 -55641966 - AluJo SINE Alu -37 275 1 207 408 48 37 chr10 84675116 84675388 -55641377 - L2 LINE L2 -598 2716 2442 285 177 35 0 chr10 84675519 84675576 -55641189 + MIR SINE MIR 115 173 -89 204 40 0 0 chr10 84676650 84676675 -55640090 + (TAA)n Simple_repeat Simple_repeat 3 27 0 332 324 73 20 chr10 84676957 84677161 -55639604 + L1MEd LINE L1 2299 2513 -3616 21 36 0 0 chr10 84677257 84677285 -55639480 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 84678544 84678579 -55638186 + AT_rich Low_complexity Low_complexity 1 35 0 241 260 81 75 chr10 84678669 84678842 -55637923 - HAL1 LINE L1 -37 2470 2297 686 297 16 6 chr10 84678873 84679055 -55637710 + MIR SINE MIR 2 185 -77 233 370 0 0 chr10 84679326 84679399 -55637366 - HAL1 LINE L1 -2422 85 13 2480 50 0 3 chr10 84679761 84680063 -55636702 + AluY SINE Alu 1 301 -10 2003 110 0 14 chr10 84680073 84680363 -55636402 + AluSx SINE Alu 1 286 -26 4332 131 51 4 chr10 84680591 84681276 -55635489 + LTR62 LTR ERVK 1 717 -2 406 321 18 12 chr10 84682561 84682726 -55634039 - MIR SINE MIR -31 231 66 259 374 52 6 chr10 84682904 84683078 -55633687 + MIR SINE MIR 47 228 -34 297 291 57 63 chr10 84684071 84684246 -55632519 + MIR3 SINE MIR 28 201 -7 24 0 0 0 chr10 84684283 84684307 -55632458 + AT_rich Low_complexity Low_complexity 1 24 0 206 265 0 0 chr10 84684467 84684516 -55632249 + A-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr10 84684741 84684770 -55631995 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr10 84684935 84684965 -55631800 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr10 84685451 84685483 -55631282 + AT_rich Low_complexity Low_complexity 1 32 0 230 262 37 55 chr10 84685503 84685667 -55631098 - L1ME4a LINE L1 -113 6008 5848 2559 178 32 16 chr10 84686182 84686681 -55630084 + L1MB2 LINE L1 5636 6142 -29 340 270 189 11 chr10 84686701 84686886 -55629879 + L1ME1 LINE L1 5941 6158 -8 536 170 165 82 chr10 84687335 84687517 -55629248 - L1MA10 LINE L1 0 6334 6138 9426 152 27 1 chr10 84687519 84689098 -55627667 + Tigger4(Zombi) DNA MER2_type 292 1911 -820 8117 117 50 122 chr10 84689098 84690753 -55626012 + THE1B-int LTR MaLR 45 1580 0 600 150 0 102 chr10 84690753 84690880 -55625885 + THE1B LTR MaLR 1 114 -250 21206 161 15 8 chr10 84690880 84694522 -55622243 - L1P4 LINE L1 -549 5619 1943 189 0 0 0 chr10 84694522 84694543 -55622222 + (CAGGG)n Simple_repeat Simple_repeat 5 25 0 21206 161 15 8 chr10 84694543 84695084 -55621681 - L1P4 LINE L1 -4225 1943 1408 1779 163 55 22 chr10 84695090 84695453 -55621312 - THE1C LTR MaLR 0 375 1 8046 132 38 2 chr10 84695453 84696679 -55620086 - THE1C-int LTR MaLR 0 1580 312 671 195 0 26 chr10 84696675 84696829 -55619936 - L1 LINE L1 -3029 3181 3032 * 698 261 119 15 chr10 84696829 84696940 -55619825 - L1 LINE L1 -4928 1213 1115 194 0 39 0 chr10 84696940 84696966 -55619799 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 698 261 119 15 chr10 84696966 84697114 -55619651 - L1 LINE L1 -5026 1115 927 2194 97 30 0 chr10 84698029 84698328 -55618437 + AluSp SINE Alu 6 313 0 4090 235 72 13 chr10 84699378 84700980 -55615785 + L1MEc LINE L1 1295 2976 -3239 1700 232 22 3 chr10 84700980 84701338 -55615427 + MLT1A1 LTR MaLR 1 365 0 4090 235 72 13 chr10 84701338 84702100 -55614665 + L1MEc LINE L1 2976 3691 -2524 1358 221 53 12 chr10 84702178 84702499 -55614266 + MER2 DNA MER2_type 4 337 -8 2968 213 49 83 chr10 84702504 84702972 -55613793 - Tigger4(Zombi) DNA MER2_type -83 2648 2214 2216 58 10 58 chr10 84702972 84703284 -55613481 + AluSp SINE Alu 1 297 -16 2968 213 49 83 chr10 84703284 84703576 -55613189 - Tigger4(Zombi) DNA MER2_type -517 2214 1914 452 113 0 0 chr10 84703576 84703638 -55613127 - MSTA LTR MaLR 0 428 367 1621 185 94 7 chr10 84703641 84703875 -55612890 + L1 LINE L1 3111 3323 -2823 1602 192 22 26 chr10 84703875 84704188 -55612577 + AluJo SINE Alu 1 312 0 1621 185 94 7 chr10 84704188 84704380 -55612385 + L1 LINE L1 3323 3574 -2572 2244 92 7 0 chr10 84704680 84704972 -55611793 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 84705227 84705249 -55611516 + AT_rich Low_complexity Low_complexity 1 22 0 477 266 38 6 chr10 84705251 84705409 -55611356 - L1MA9 LINE L1 -54 6258 6096 * 717 225 50 10 chr10 84705406 84705606 -55611159 - L1MA9 LINE L1 -592 5720 5513 1579 198 11 101 chr10 84706499 84706934 -55609831 + MSTD LTR MaLR 1 396 0 2671 239 31 9 chr10 84707682 84708321 -55608444 - MER82 DNA MER2_type 0 653 1 4593 181 21 16 chr10 84708593 84709489 -55607276 + MER4D LTR ERV1 1 660 -4 268 357 122 10 chr10 84709846 84710042 -55606723 + LTR33 LTR ERVL 304 521 0 24 0 0 0 chr10 84710879 84710903 -55605862 + AT_rich Low_complexity Low_complexity 1 24 0 250 214 12 36 chr10 84711037 84711121 -55605644 + L1MEc LINE L1 35 116 -6280 1151 266 65 65 chr10 84711188 84711974 -55604791 + L1M4 LINE L1 3377 4162 -1984 27 92 0 0 chr10 84711975 84712051 -55604714 + AT_rich Low_complexity Low_complexity 1 76 0 744 171 19 13 chr10 84712143 84712301 -55604464 - L1MB7 LINE L1 -231 5953 5795 919 235 21 24 chr10 84712317 84712606 -55604159 - L1M4 LINE L1 -1465 4681 4394 1858 193 51 11 chr10 84712607 84712980 -55603785 - MSTD LTR MaLR 0 396 9 461 256 94 17 chr10 84712990 84713224 -55603541 - L1M4 LINE L1 -1749 4397 4146 291 207 0 35 chr10 84713224 84713282 -55603483 + polypyrimidine Low_complexity Low_complexity 3 58 0 745 92 31 31 chr10 84713282 84713445 -55603320 + CT-rich Low_complexity Low_complexity 3 165 0 2688 281 49 19 chr10 84713447 84714619 -55602146 - L1M4 LINE L1 -1951 4195 2989 438 20 0 0 chr10 84714647 84714698 -55602067 + (TG)n Simple_repeat Simple_repeat 2 52 0 1173 227 56 19 chr10 84714699 84715108 -55601657 + MER74A LTR ERVL 16 571 -51 608 257 118 12 chr10 84716121 84716366 -55600399 + L1ME LINE L1 5316 5586 -580 2006 132 73 3 chr10 84716428 84716768 -55599997 + THE1B LTR MaLR 1 364 0 479 325 165 5 chr10 84717349 84717731 -55599034 + Charlie7 DNA MER1_type 228 670 -1942 229 258 22 34 chr10 84717995 84718084 -55598681 + MLT1J1 LTR MaLR 321 408 -38 274 252 56 21 chr10 84718146 84718289 -55598476 + Charlie7 DNA MER1_type 696 843 -1769 514 229 73 10 chr10 84718339 84718544 -55598221 + Charlie7 DNA MER1_type 993 1210 -1402 255 226 16 0 chr10 84718744 84718806 -55597959 + Charlie7 DNA MER1_type 1502 1564 -1048 535 288 42 9 chr10 84719123 84719335 -55597430 - L1ME LINE L1 -658 5504 5286 292 161 32 16 chr10 84719336 84719398 -55597367 - LTR23 LTR ERV1 0 437 375 1833 155 53 23 chr10 84719400 84719832 -55596933 - LTR56 LTR ERV1 0 445 1 563 230 219 0 chr10 84719832 84720097 -55596668 - L1ME LINE L1 -858 5288 4966 605 280 83 17 chr10 84720134 84720570 -55596195 + L1ME LINE L1 4981 5441 -725 1293 234 54 48 chr10 84720573 84720944 -55595821 + L1M4 LINE L1 13 385 -6157 1495 111 4 9 chr10 84720962 84721187 -55595578 - pTR5 LTR ERV1 -2044 394 171 364 204 31 20 chr10 84721189 84721287 -55595478 - LTR30 LTR ERV1 -80 642 544 5752 135 59 119 chr10 84721287 84722651 -55594114 - pTR5 LTR ERV1 -413 2025 743 2623 221 40 41 chr10 84722719 84723269 -55593496 + L1M4 LINE L1 477 1026 -5516 546 29 0 0 chr10 84723269 84723337 -55593428 + (TATAG)n Simple_repeat Simple_repeat 3 70 0 1553 139 19 107 chr10 84723337 84723519 -55593246 - AluSx SINE Alu -23 289 143 1855 168 3 0 chr10 84723519 84723811 -55592954 - AluSx SINE Alu -17 295 3 1553 139 19 107 chr10 84723811 84723938 -55592827 - AluSx SINE Alu -169 143 7 2623 221 40 41 chr10 84723938 84724110 -55592655 + L1M4 LINE L1 1024 1199 -5343 846 187 6 24 chr10 84724336 84724521 -55592244 - MLT1C LTR MaLR -5 462 214 483 189 28 0 chr10 84724556 84724662 -55592103 - L1MA9 LINE L1 -47 6265 6157 1322 216 4 8 chr10 84724687 84724942 -55591823 - MER54B LTR ERVL 0 793 540 249 192 19 0 chr10 84724963 84725015 -55591750 - Alu SINE Alu -248 53 1 218 319 75 21 chr10 84725030 84725124 -55591641 - MIR SINE MIR -148 114 16 236 239 92 85 chr10 84725893 84726023 -55590742 + MIR SINE MIR 101 231 -31 225 289 0 0 chr10 84726194 84726246 -55590519 + LTR30 LTR ERV1 1 52 -670 1039 149 14 27 chr10 84726263 84726472 -55590293 + LTR12 LTR ERV1 55 1983 -455 256 145 87 29 chr10 84726510 84726579 -55590186 + LTR12 LTR ERV1 205 277 -437 290 260 0 0 chr10 84726579 84726656 -55590109 + LTR30 LTR ERV1 544 620 -102 659 157 50 8 chr10 84726656 84726777 -55589988 + LTR12 LTR ERV1 355 480 -234 429 291 139 0 chr10 84727566 84727724 -55589041 + MIR SINE MIR 39 218 -44 1834 147 149 8 chr10 84727743 84728118 -55588647 + MSTA LTR MaLR 1 428 0 244 114 0 0 chr10 84728450 84728485 -55588280 - MLT1I LTR MaLR -21 388 354 1540 155 35 0 chr10 84728501 84728987 -55587778 + L1MA6 LINE L1 3893 4588 -1558 5630 169 35 13 chr10 84728996 84730480 -55586285 + L1MA6 LINE L1 4774 6295 -5 326 196 0 11 chr10 84731440 84731509 -55585256 - AluS SINE Alu -244 57 6 1254 156 89 117 chr10 84731774 84732166 -55584599 + MLT1B LTR MaLR 1 381 -9 846 324 137 10 chr10 84733929 84734420 -55582345 - L2 LINE L2 -1806 1508 956 383 231 154 23 chr10 84734439 84734569 -55582196 - L2 LINE L2 -2471 843 697 1043 194 0 20 chr10 84734569 84734765 -55582000 - MER20 DNA MER1_type 0 219 28 665 273 158 64 chr10 84734831 84735330 -55581435 - L2 LINE L2 -2617 697 152 252 0 0 0 chr10 84735599 84735627 -55581138 + (TG)n Simple_repeat Simple_repeat 2 29 0 2317 184 58 39 chr10 84736192 84737276 -55579489 + L1MB8 LINE L1 4771 5868 -310 21 36 0 0 chr10 84737654 84737682 -55579083 + AT_rich Low_complexity Low_complexity 1 28 0 2174 256 40 55 chr10 84737800 84739309 -55577456 + L1MC/D LINE L1 58 1870 -4851 1162 249 80 7 chr10 84739296 84739711 -55577054 + L1MC/D LINE L1 5790 6237 -745 * 520 298 66 45 chr10 84739867 84740109 -55576656 + LTR16A LTR ERVL 73 319 -131 211 205 0 0 chr10 84740174 84740213 -55576552 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2171 112 52 0 chr10 84740215 84740545 -55576220 - MER41C LTR ERV1 -207 347 1 1811 183 8 2 chr10 84740548 84741024 -55575741 + L1MC3 LINE L1 7162 7784 -1 29 84 0 0 chr10 84741038 84741109 -55575656 + AT_rich Low_complexity Low_complexity 1 71 0 22 0 0 0 chr10 84741598 84741620 -55575145 + AT_rich Low_complexity Low_complexity 1 22 0 204 304 43 14 chr10 84742207 84742276 -55574489 - L3 LINE CR1 -12 1565 1495 2320 94 0 3 chr10 84742292 84742601 -55574164 + AluSc SINE Alu 1 308 -1 952 256 84 18 chr10 84743234 84743628 -55573137 - L1M4 LINE L1 -1098 5048 4629 359 341 22 33 chr10 84743646 84743916 -55572849 + L1PA13 LINE L1 7 273 -7308 189 0 0 0 chr10 84744104 84744125 -55572640 + (CAGTG)n Simple_repeat Simple_repeat 2 22 0 580 144 0 34 chr10 84744972 84745090 -55571675 + L1PA13 LINE L1 2321 2434 -5140 616 157 50 8 chr10 84795446 84795567 -55521198 - LTR12 LTR ERV1 -234 480 355 266 260 0 0 chr10 84795567 84795644 -55521121 - LTR30 LTR ERV1 -102 620 544 1177 98 4 159 chr10 84795752 84796029 -55520736 - LTR12 LTR ERV1 -480 234 1 306 196 0 11 chr10 84796497 84796566 -55520199 + AluS SINE Alu 6 57 -243 3226 153 32 7 chr10 84797526 84798116 -55518649 - L1MA6 LINE L1 -5 6295 5691 1829 61 11 69 chr10 84798217 84798478 -55518287 - AluSp SINE Alu -67 246 1 2361 121 18 8 chr10 84798488 84798886 -55517879 + Tigger4(Zombi) DNA MER2_type 2245 2646 -85 1308 221 49 12 chr10 84798893 84799218 -55517547 - MER2 DNA MER2_type -8 337 1 296 228 127 0 chr10 84799218 84799295 -55517470 + Tigger4(Zombi) DNA MER2_type 2645 2731 0 1923 265 34 0 chr10 84799295 84800054 -55516711 - L1M4 LINE L1 -2525 3621 2837 1488 223 26 3 chr10 84800055 84800365 -55516400 - MLT1A1 LTR MaLR 0 365 49 5122 156 23 72 chr10 84800470 84801389 -55515376 - L1MA6 LINE L1 -744 5402 4714 249 57 0 0 chr10 84801389 84801424 -55515341 + (TG)n Simple_repeat Simple_repeat 2 36 0 5122 156 23 72 chr10 84801424 84801985 -55514780 - L1MA6 LINE L1 -1432 4714 4127 911 234 59 16 chr10 84801984 84802288 -55514477 - L1M4 LINE L1 -1817 4827 4511 * 219 319 75 21 chr10 84803185 84803279 -55513486 + MIR SINE MIR 16 114 -148 229 192 19 0 chr10 84803294 84803346 -55513419 + Alu SINE Alu 1 53 -250 1262 216 4 4 chr10 84803367 84803621 -55513144 + MER54B LTR ERVL 540 793 0 452 189 28 0 chr10 84803646 84803752 -55513013 + L1MA9 LINE L1 6157 6265 -47 825 181 6 22 chr10 84803792 84803977 -55512788 + MLT1C LTR MaLR 219 467 0 578 208 30 12 chr10 84803978 84804146 -55512619 - L1M4 LINE L1 -5343 1199 1029 891 113 31 160 chr10 84804150 84804275 -55512490 + AluSq SINE Alu 7 100 -213 1878 170 3 0 chr10 84804275 84804569 -55512196 + AluSx SINE Alu 1 295 -17 891 113 31 160 chr10 84804569 84804637 -55512128 + AluSq SINE Alu 100 175 -138 297 221 29 29 chr10 84804811 84804915 -55511850 + L1M4 LINE L1 2693 2796 -3350 2063 169 37 11 chr10 84805113 84805491 -55511274 + MER61D LTR ERV1 114 501 0 4254 106 214 125 chr10 84805557 84805632 -55511133 - pTR5 LTR ERV1 0 2438 2371 2552 26 7 7 chr10 84805632 84805934 -55510831 - AluY SINE Alu -9 302 1 4254 106 214 125 chr10 84805934 84807234 -55509531 - pTR5 LTR ERV1 -67 2371 835 2276 92 7 0 chr10 84807634 84807926 -55508839 + AluSq SINE Alu 1 294 -19 1585 185 94 7 chr10 84808226 84808418 -55508347 - L1 LINE L1 -2572 3574 3400 1618 192 22 26 chr10 84808418 84808731 -55508034 - AluJo SINE Alu 0 312 1 1585 185 94 7 chr10 84808731 84808965 -55507800 - L1 LINE L1 -2746 3400 3111 449 113 0 0 chr10 84808968 84809030 -55507735 + MSTA LTR MaLR 367 428 0 2190 163 69 11 chr10 84809030 84809322 -55507443 + Tigger4(Zombi) DNA MER2_type 1914 2244 -487 2247 64 10 55 chr10 84809322 84809633 -55507132 - AluSp SINE Alu -16 297 1 2190 163 69 11 chr10 84809633 84809801 -55506964 + Tigger4(Zombi) DNA MER2_type 2244 2401 -330 1579 198 11 101 chr10 84810819 84811254 -55505511 + MSTD LTR MaLR 1 396 0 2671 239 31 9 chr10 84812002 84812641 -55504124 - MER82 DNA MER2_type 0 653 1 4593 181 21 16 chr10 84812913 84813809 -55502956 + MER4D LTR ERV1 1 660 -4 268 357 122 10 chr10 84814166 84814362 -55502403 + LTR33 LTR ERVL 304 521 0 24 0 0 0 chr10 84815232 84815256 -55501509 + AT_rich Low_complexity Low_complexity 1 24 0 250 214 12 36 chr10 84815390 84815474 -55501291 + L1MEc LINE L1 35 116 -6280 1137 267 65 65 chr10 84815541 84816327 -55500438 + L1M4 LINE L1 3377 4162 -1984 27 92 0 0 chr10 84816328 84816404 -55500361 + AT_rich Low_complexity Low_complexity 1 76 0 744 171 19 13 chr10 84816496 84816654 -55500111 - L1MB7 LINE L1 -231 5953 5795 919 235 21 24 chr10 84816670 84816959 -55499806 - L1M4 LINE L1 -1465 4681 4394 1858 193 51 11 chr10 84816960 84817333 -55499432 - MSTD LTR MaLR 0 396 9 461 256 94 17 chr10 84817343 84817577 -55499188 - L1M4 LINE L1 -1749 4397 4146 291 207 0 35 chr10 84817577 84817635 -55499130 + polypyrimidine Low_complexity Low_complexity 3 58 0 745 92 31 31 chr10 84817635 84817798 -55498967 + CT-rich Low_complexity Low_complexity 3 165 0 2688 281 49 19 chr10 84817800 84818972 -55497793 - L1M4 LINE L1 -1951 4195 2989 438 20 0 0 chr10 84819000 84819051 -55497714 + (TG)n Simple_repeat Simple_repeat 2 52 0 1173 227 56 19 chr10 84819052 84819461 -55497304 + MER74A LTR ERVL 16 571 -51 608 257 118 12 chr10 84820474 84820719 -55496046 + L1ME LINE L1 5316 5586 -580 2006 132 73 3 chr10 84820781 84821121 -55495644 + THE1B LTR MaLR 1 364 0 479 325 165 5 chr10 84821702 84822084 -55494681 + Charlie7 DNA MER1_type 228 670 -1942 229 258 22 34 chr10 84822348 84822437 -55494328 + MLT1J1 LTR MaLR 321 408 -38 274 252 56 21 chr10 84822499 84822642 -55494123 + Charlie7 DNA MER1_type 696 843 -1769 514 229 73 10 chr10 84822692 84822897 -55493868 + Charlie7 DNA MER1_type 993 1210 -1402 329 251 136 37 chr10 84823097 84823288 -55493477 + Charlie7 DNA MER1_type 1502 1711 -901 535 288 42 9 chr10 84823402 84823614 -55493151 - L1ME LINE L1 -658 5504 5286 292 161 32 16 chr10 84823615 84823677 -55493088 - LTR23 LTR ERV1 0 437 375 1833 155 53 23 chr10 84823679 84824111 -55492654 - LTR56 LTR ERV1 0 445 1 563 230 219 0 chr10 84824111 84824376 -55492389 - L1ME LINE L1 -858 5288 4966 605 280 83 17 chr10 84824413 84824849 -55491916 + L1ME LINE L1 4981 5441 -725 1293 234 54 48 chr10 84824852 84825223 -55491542 + L1M4 LINE L1 13 385 -6157 1495 111 4 9 chr10 84825241 84825466 -55491299 - pTR5 LTR ERV1 -2044 394 171 364 204 31 20 chr10 84825468 84825566 -55491199 - LTR30 LTR ERV1 -80 642 544 5752 135 59 119 chr10 84825566 84826930 -55489835 - pTR5 LTR ERV1 -413 2025 743 1992 228 39 44 chr10 84826998 84827543 -55489222 + L1M4 LINE L1 477 1018 -5524 372 22 0 0 chr10 84827549 84827594 -55489171 + (TATAG)n Simple_repeat Simple_repeat 1 45 0 429 291 139 0 chr10 84827961 84828119 -55488646 + MIR SINE MIR 39 218 -44 1834 147 149 8 chr10 84828138 84828513 -55488252 + MSTA LTR MaLR 1 428 0 244 114 0 0 chr10 84828845 84828880 -55487885 - MLT1I LTR MaLR -21 388 354 1540 155 35 0 chr10 84828896 84829382 -55487383 + L1 LINE L1 3893 4588 -1558 1043 250 10 10 chr10 84829391 84829679 -55487086 + L1 LINE L1 4774 5061 -1085 1254 156 89 117 chr10 84829801 84830193 -55486572 + MLT1B LTR MaLR 1 381 -9 846 324 137 10 chr10 84831956 84832447 -55484318 - L2 LINE L2 -1806 1508 956 383 231 154 23 chr10 84832466 84832596 -55484169 - L2 LINE L2 -2471 843 697 1043 194 0 20 chr10 84832596 84832792 -55483973 - MER20 DNA MER1_type 0 219 28 665 273 158 64 chr10 84832858 84833357 -55483408 - L2 LINE L2 -2617 697 152 252 0 0 0 chr10 84833626 84833654 -55483111 + (TG)n Simple_repeat Simple_repeat 2 29 0 2317 184 58 39 chr10 84834219 84835303 -55481462 + L1MB8 LINE L1 4771 5868 -310 21 36 0 0 chr10 84835681 84835709 -55481056 + AT_rich Low_complexity Low_complexity 1 28 0 843 285 36 13 chr10 84835827 84836168 -55480597 + L1MCc LINE L1 58 749 -5673 245 200 0 0 chr10 84836393 84836433 -55480332 + L1MCc LINE L1 899 938 -5484 1693 245 47 17 chr10 84836562 84837447 -55479318 + L1MCc LINE L1 957 1870 -4851 772 252 93 9 chr10 84837597 84837913 -55478852 + L1MC/D LINE L1 5096 5442 -745 520 298 66 45 chr10 84838069 84838311 -55478454 + LTR16A LTR ERVL 73 319 -131 211 205 0 0 chr10 84838376 84838415 -55478350 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2186 109 52 0 chr10 84838417 84838747 -55478018 - MER41C LTR ERV1 -207 347 1 1811 183 8 2 chr10 84838750 84839226 -55477539 + L1MC3 LINE L1 7162 7784 -1 29 84 0 0 chr10 84839240 84839311 -55477454 + AT_rich Low_complexity Low_complexity 1 71 0 190 319 43 14 chr10 84839881 84839950 -55476815 - L3 LINE CR1 -12 1565 1495 2320 94 0 3 chr10 84839966 84840275 -55476490 + AluSc SINE Alu 1 308 -1 952 256 84 18 chr10 84840908 84841302 -55475463 - L1M4 LINE L1 -1098 5284 4865 359 341 22 33 chr10 84841320 84841590 -55475175 + L1PA15 LINE L1 7 273 -7308 189 0 0 0 chr10 84841778 84841799 -55474966 + (CAGTG)n Simple_repeat Simple_repeat 2 22 0 15477 216 17 12 chr10 84842646 84842790 -55473975 + L1PA15 LINE L1 2321 2463 -5140 282 29 0 0 chr10 84842790 84842825 -55473940 + (CA)n Simple_repeat Simple_repeat 2 36 0 15477 216 17 12 chr10 84842825 84846879 -55469886 + L1PA15 LINE L1 2463 6570 -1033 207 25 75 0 chr10 84846879 84846919 -55469846 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 15477 216 17 12 chr10 84846919 84847941 -55468824 + L1PA15 LINE L1 6570 7585 -18 583 222 53 26 chr10 84848203 84848392 -55468373 - L1M4 LINE L1 -1525 4857 4664 * 1058 132 6 0 chr10 84848384 84848558 -55468207 - L1M2 LINE L1 -635 5665 5491 4720 151 35 17 chr10 84848658 84849415 -55467350 - L1PA16 LINE L1 -68 6098 5318 2293 107 0 3 chr10 84849415 84849725 -55467040 - AluSc SINE Alu 0 309 1 4720 151 35 17 chr10 84849725 84850162 -55466603 - L1PA16 LINE L1 -848 5318 4890 2450 259 79 12 chr10 84850156 84851554 -55465211 - L1M4 LINE L1 -2631 3751 2261 * 3006 179 22 8 chr10 84851554 84852186 -55464579 - L1MC2 LINE L1 -9 6335 5695 1336 227 16 23 chr10 84852188 84852576 -55464189 - L1MC2 LINE L1 -941 5205 4821 2010 163 47 6 chr10 84854514 84854877 -55461888 - L1PA15 LINE L1 0 6165 5788 6259 190 18 18 chr10 84854882 84855928 -55460837 + L1P4 LINE L1 3934 4978 -1187 2256 139 8 35 chr10 84855928 84856302 -55460463 - THE1B LTR MaLR 0 364 1 6259 190 18 18 chr10 84856302 84856819 -55459946 + L1P4 LINE L1 4978 5494 -671 24 67 0 0 chr10 84857174 84857219 -55459546 + AT_rich Low_complexity Low_complexity 1 45 0 1544 257 57 66 chr10 84857436 84858618 -55458147 + L1MC5 LINE L1 6414 7595 -366 1722 75 0 0 chr10 84858776 84859003 -55457762 - L1PA5 LINE L1 0 6154 5928 247 67 0 0 chr10 84859003 84859033 -55457732 + L1PA5 LINE L1 5904 5933 -221 808 273 64 32 chr10 84859190 84859534 -55457231 + L1ME3 LINE L1 5733 6087 -75 499 219 48 43 chr10 84859559 84859769 -55456996 + L1MC5 LINE L1 7570 7780 -181 307 325 0 0 chr10 84859776 84859899 -55456866 + L1M4 LINE L1 2465 2587 -3559 5397 174 23 5 chr10 84860010 84860996 -55455769 + Tigger4(Zombi) DNA MER2_type 908 1911 -820 9416 130 56 8 chr10 84860996 84862461 -55454304 + THE1B-int LTR MaLR 45 1580 0 600 150 0 102 chr10 84862461 84862588 -55454177 + THE1B LTR MaLR 1 114 -250 21206 161 15 8 chr10 84862588 84866230 -55450535 - L1P4 LINE L1 -549 5619 1943 189 0 0 0 chr10 84866230 84866251 -55450514 + (CAGGG)n Simple_repeat Simple_repeat 5 25 0 21206 161 15 8 chr10 84866251 84866792 -55449973 - L1P4 LINE L1 -4225 1943 1408 1836 154 55 22 chr10 84866798 84867161 -55449604 - THE1C LTR MaLR 0 375 1 8068 131 38 2 chr10 84867161 84868387 -55448378 - THE1C-int LTR MaLR 0 1580 312 671 195 0 26 chr10 84868383 84868537 -55448228 - L1 LINE L1 -3029 3181 3032 * 698 261 119 15 chr10 84868537 84868648 -55448117 - L1 LINE L1 -4928 1213 1115 194 0 39 0 chr10 84868648 84868674 -55448091 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 698 261 119 15 chr10 84868674 84868822 -55447943 - L1 LINE L1 -5026 1115 927 2194 97 30 0 chr10 84869737 84870036 -55446729 + AluSp SINE Alu 6 313 0 3240 223 91 12 chr10 84871086 84872592 -55444173 + L1MEc LINE L1 1295 2808 -3407 1332 225 41 3 chr10 84872728 84873066 -55443699 + L1MEc LINE L1 3603 3953 -2262 404 236 16 32 chr10 84873081 84873204 -55443561 + L1MEc LINE L1 4862 4982 -1233 * 1775 226 142 10 chr10 84873189 84873703 -55443062 + L1MB7 LINE L1 5585 6166 -18 240 280 48 24 chr10 84873746 84873871 -55442894 + L1MC5 LINE L1 7801 7928 -33 21 57 0 0 chr10 84875846 84875881 -55440884 + AT_rich Low_complexity Low_complexity 1 35 0 184 333 54 31 chr10 84876600 84876729 -55440036 - L2 LINE L2 -457 2857 2726 341 339 37 0 chr10 84876740 84876849 -55439916 - MIR SINE MIR -136 126 14 258 356 133 25 chr10 84877544 84877741 -55439024 + L2 LINE L2 2606 2843 -471 2030 119 6 13 chr10 84877741 84878052 -55438713 - AluSx SINE Alu -3 309 1 258 356 133 25 chr10 84878052 84878132 -55438633 + L2 LINE L2 2843 2913 -401 274 259 125 9 chr10 84878330 84878442 -55438323 + L2 LINE L2 3189 3313 0 355 299 112 14 chr10 84878443 84878657 -55438108 + L1MB8 LINE L1 3651 3885 -2261 385 288 127 77 chr10 84879432 84879536 -55437229 + L1MB8 LINE L1 4509 4606 -1540 1334 126 26 4 chr10 84879536 84879766 -55436999 - L1PB2 LINE L1 -7 6144 5910 385 288 127 77 chr10 84879766 84879984 -55436781 + L1MB8 LINE L1 4606 4847 -1299 197 350 91 28 chr10 84880623 84880766 -55435999 - MIR SINE MIR -91 171 20 493 178 0 11 chr10 84881378 84881468 -55435297 + FLAM_C SINE Alu 29 117 -26 366 23 0 0 chr10 84881468 84881511 -55435254 + (CA)n Simple_repeat Simple_repeat 2 44 0 182 61 0 30 chr10 84881848 84881881 -55434884 + (TTG)n Simple_repeat Simple_repeat 2 33 0 605 225 6 56 chr10 84882373 84882551 -55434214 - L1M4 LINE L1 -3328 2818 2650 2204 221 33 6 chr10 84882563 84883075 -55433690 + L1MB8 LINE L1 5653 6178 0 267 286 82 19 chr10 84883074 84883280 -55433485 - L1M4 LINE L1 -3496 2650 2432 * 24 85 0 0 chr10 84883311 84883370 -55433395 + AT_rich Low_complexity Low_complexity 1 59 0 2447 63 0 0 chr10 84883990 84884293 -55432472 - AluY SINE Alu -8 303 1 1920 142 6 25 chr10 84884369 84884687 -55432078 - AluSx SINE Alu 0 312 1 224 258 15 0 chr10 84884983 84885049 -55431716 + (TA)n Simple_repeat Simple_repeat 1 67 0 22 0 0 0 chr10 84887659 84887681 -55429084 + AT_rich Low_complexity Low_complexity 1 22 0 2025 97 13 30 chr10 84887682 84887859 -55428906 + AluY SINE Alu 1 179 -132 207 0 0 0 chr10 84887859 84887882 -55428883 + (CTA)n Simple_repeat Simple_repeat 2 24 0 2025 97 13 30 chr10 84887882 84887990 -55428775 + AluY SINE Alu 179 283 -28 252 0 0 0 chr10 84887990 84888018 -55428747 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 2025 97 13 30 chr10 84888018 84888031 -55428734 + AluY SINE Alu 283 295 -16 21 36 0 0 chr10 84888817 84888845 -55427920 + AT_rich Low_complexity Low_complexity 1 28 0 209 151 19 0 chr10 84889440 84889493 -55427272 + (TATAA)n Simple_repeat Simple_repeat 3 56 0 21 0 0 0 chr10 84890401 84890422 -55426343 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 84893010 84893045 -55423720 + AT_rich Low_complexity Low_complexity 1 35 0 204 139 70 0 chr10 84893380 84893423 -55423342 + A-rich Low_complexity Low_complexity 2 47 0 389 376 9 14 chr10 84894554 84894775 -55421990 - MIR SINE MIR -34 228 9 24 91 0 0 chr10 84894817 84894883 -55421882 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr10 84894960 84894995 -55421770 + AT_rich Low_complexity Low_complexity 1 35 0 612 260 315 22 chr10 84895766 84896144 -55420621 - L2 LINE L2 -343 2971 2469 1878 176 21 19 chr10 84896144 84896518 -55420247 - THE1C LTR MaLR 0 375 1 612 260 315 22 chr10 84896518 84896539 -55420226 - L2 LINE L2 -845 2469 2455 324 363 31 0 chr10 84896740 84896900 -55419865 + L1MC/D LINE L1 5479 5643 -2165 3779 104 24 14 chr10 84897001 84897588 -55419177 - L1PA10 LINE L1 -1 6167 5575 739 136 0 16 chr10 84897588 84897706 -55419059 - L1P LINE L1 -2101 4045 3928 257 315 36 18 chr10 84897855 84897966 -55418799 + MIR SINE MIR 150 262 0 2093 143 138 5 chr10 84897994 84898372 -55418393 + MSTA LTR MaLR 1 428 0 9282 175 17 7 chr10 84898372 84900001 -55416764 + MSTA-int LTR MaLR 1 1645 -6 1842 141 121 45 chr10 84900007 84900405 -55416360 + MSTA LTR MaLR 1 428 0 27 0 0 0 chr10 84900961 84900988 -55415777 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 84901276 84901298 -55415467 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 84902852 84902881 -55413884 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr10 84902940 84902966 -55413799 + AT_rich Low_complexity Low_complexity 1 26 0 939 320 68 42 chr10 84903534 84903865 -55412900 + L2 LINE L2 2446 2767 -546 2071 133 0 7 chr10 84903865 84904173 -55412592 + AluSx SINE Alu 1 306 -6 939 320 68 42 chr10 84904173 84904684 -55412081 + L2 LINE L2 2767 3313 0 431 246 99 35 chr10 84904711 84904853 -55411912 + MLT1L LTR MaLR 465 615 0 1838 161 0 55 chr10 84905804 84906133 -55410632 - AluSx SINE Alu -1 311 1 21 82 0 0 chr10 84906651 84906700 -55410065 + AT_rich Low_complexity Low_complexity 1 49 0 234 254 0 0 chr10 84907307 84907366 -55409399 - L1MC5 LINE L1 -74 7887 7829 853 244 41 0 chr10 84907684 84907930 -55408835 + L1M4 LINE L1 1070 1325 -5217 524 200 72 4 chr10 84907920 84908142 -55408623 - L1M4 LINE L1 -5488 1054 773 * 240 341 8 39 chr10 84908142 84908271 -55408494 + L1M4 LINE L1 2332 2456 -4190 499 226 90 17 chr10 84908295 84908472 -55408293 - L1M4 LINE L1 -1805 4341 4152 369 0 0 0 chr10 84908480 84908491 -55408274 + (CA)n Simple_repeat Simple_repeat 1 52 0 369 0 0 0 chr10 84908491 84908532 -55408233 + (CA)n Simple_repeat Simple_repeat 2 42 0 243 195 34 34 chr10 84908629 84908747 -55408018 + (TA)n Simple_repeat Simple_repeat 1 118 0 239 242 0 11 chr10 84908784 84908879 -55407886 + (TA)n Simple_repeat Simple_repeat 1 94 0 561 165 58 10 chr10 84908906 84909009 -55407756 - FRAM SINE Alu -37 139 32 270 247 49 0 chr10 84909130 84909211 -55407554 + MER110 LTR ERV1 2 86 -405 732 231 32 82 chr10 84909274 84909555 -55407210 + MER110 LTR ERV1 79 345 -146 680 214 121 15 chr10 84909588 84909625 -55407140 - L1MA9 LINE L1 -38 6274 6242 492 62 0 0 chr10 84909625 84909689 -55407076 + (TA)n Simple_repeat Simple_repeat 1 64 0 680 214 121 15 chr10 84909689 84909857 -55406908 - L1MA9 LINE L1 -70 6242 6047 243 210 0 49 chr10 84909850 84909931 -55406834 - L1MB1 LINE L1 -163 6026 5950 * 229 235 10 10 chr10 84911099 84911201 -55405564 + (TA)n Simple_repeat Simple_repeat 1 102 0 22 35 0 0 chr10 84911215 84911244 -55405521 + AT_rich Low_complexity Low_complexity 1 29 0 4155 176 34 53 chr10 84911262 84912485 -55404280 - L1MA9 LINE L1 -14 6298 5090 9293 19 0 1 chr10 84912485 84914339 -55402426 + L1PA3 LINE L1 4299 6150 -5 1311 228 45 34 chr10 84914653 84915097 -55401668 - L1MA9 LINE L1 -1110 5036 4588 * 5233 215 31 53 chr10 84915081 84915875 -55400890 - L1 LINE L1 -1447 4699 3952 2507 54 3 0 chr10 84915875 84916190 -55400575 + L1PA5 LINE L1 5835 6150 -4 5233 215 31 53 chr10 84916190 84916922 -55399843 - L1 LINE L1 -2194 3952 3206 636 168 0 0 chr10 84916955 84917056 -55399709 - AluJ SINE Alu -21 291 191 933 35 0 0 chr10 84917057 84917170 -55399595 - L1PA5 LINE L1 -1132 5014 4902 7018 54 2 9 chr10 84917170 84918322 -55398443 + L1PA5 LINE L1 5004 6149 -5 983 213 5 10 chr10 84918335 84918537 -55398228 - AluJ SINE Alu -111 201 1 1796 141 106 6 chr10 84918702 84919043 -55397722 + THE1C LTR MaLR 1 375 0 335 335 57 26 chr10 84919289 84919677 -55397088 - HAL1 LINE L1 -855 1652 1253 22 0 0 0 chr10 84920689 84920711 -55396054 + AT_rich Low_complexity Low_complexity 1 22 0 2049 126 7 3 chr10 84921198 84921499 -55395266 - AluSx SINE Alu -10 302 1 2294 102 0 0 chr10 84922254 84922557 -55394208 + AluSg SINE Alu 1 303 -7 414 0 0 0 chr10 84922558 84922604 -55394161 + (TA)n Simple_repeat Simple_repeat 1 46 0 1025 304 81 66 chr10 84923229 84923446 -55393319 - L2 LINE L2 -1 3312 3100 2078 147 9 3 chr10 84923446 84923787 -55392978 + MER61A LTR ERV1 1 343 0 1025 304 81 66 chr10 84923787 84924172 -55392593 - L2 LINE L2 -213 3100 2694 1788 134 0 61 chr10 84924172 84924500 -55392265 - AluSx SINE Alu -4 308 1 1025 304 81 66 chr10 84924500 84924775 -55391990 - L2 LINE L2 -619 2694 2425 313 293 101 10 chr10 84925207 84925306 -55391459 - L2 LINE L2 -523 2791 2684 30 27 0 0 chr10 84926224 84926261 -55390504 + AT_rich Low_complexity Low_complexity 1 37 0 2327 166 64 46 chr10 84926273 84926790 -55389975 - L1MA9 LINE L1 0 6312 5787 189 0 0 0 chr10 84926817 84926838 -55389927 + (GA)n Simple_repeat Simple_repeat 1 21 0 1384 174 84 3 chr10 84926839 84927172 -55389593 - L1 LINE L1 -2553 5012 4653 2416 269 58 23 chr10 84927217 84928377 -55388388 - L1 LINE L1 -3851 3714 2544 1637 276 23 2 chr10 84928376 84928774 -55387991 - L1 LINE L1 -5734 1762 1357 * 240 318 51 17 chr10 84929241 84929355 -55387410 - MIR SINE MIR -59 149 33 306 314 8 0 chr10 84929922 84930040 -55386725 - HAL1b LINE L1 -52 1296 1178 554 245 98 85 chr10 84930056 84930505 -55386260 - HAL1b LINE L1 -239 1109 655 21 71 0 0 chr10 84930786 84930828 -55385937 + AT_rich Low_complexity Low_complexity 1 42 0 484 272 98 60 chr10 84930843 84931280 -55385485 - HAL1b LINE L1 -806 542 89 227 216 68 0 chr10 84931425 84931513 -55385252 - L1ME LINE L1 -196 5925 5832 366 196 78 10 chr10 84931519 84931621 -55385144 - L1MC3 LINE L1 0 7785 7677 3018 89 2 16 chr10 84931621 84932048 -55384717 - L1PA11 LINE L1 -5 6169 5749 2647 93 5 0 chr10 84932493 84932860 -55383905 - L1PB1 LINE L1 -1 6150 5782 541 58 18 80 chr10 84932901 84933179 -55383586 + (TA)n Simple_repeat Simple_repeat 1 260 0 227 111 0 0 chr10 84933179 84933215 -55383550 - L1P5 LINE L1 -332 5819 5784 561 33 40 73 chr10 84933245 84933526 -55383239 + (TA)n Simple_repeat Simple_repeat 1 271 0 241 105 0 0 chr10 84933537 84933575 -55383190 - L1P5 LINE L1 -332 5819 5782 545 95 6 71 chr10 84933575 84933744 -55383021 + (TA)n Simple_repeat Simple_repeat 1 158 0 11892 193 8 25 chr10 84933754 84937025 -55379740 - L1P5 LINE L1 -359 5792 2581 4056 133 34 36 chr10 84937023 84937935 -55378830 - L1PBa LINE L1 -3814 3048 2065 * 29 70 0 0 chr10 84938538 84938595 -55378170 + AT_rich Low_complexity Low_complexity 1 57 0 251 331 29 14 chr10 84938781 84938920 -55377845 + L1MD2 LINE L1 5455 5595 -526 401 0 20 0 chr10 84939007 84939056 -55377709 + (TG)n Simple_repeat Simple_repeat 2 51 0 5828 211 26 16 chr10 84939076 84940523 -55376242 - L1P LINE L1 -813 5341 3885 4433 69 25 3 chr10 84940571 84941202 -55375563 + L1PA8A LINE L1 5519 6162 0 29 71 4 0 chr10 84941635 84941749 -55375016 + AT_rich Low_complexity Low_complexity 1 78 0 780 150 36 0 chr10 84942323 84942463 -55374302 - L1MC/D LINE L1 -651 5591 5447 2591 227 41 27 chr10 84942471 84943127 -55373638 + L1MD2 LINE L1 5688 6352 -7 240 312 56 40 chr10 84943506 84943631 -55373134 - LTR33A LTR ERVL -94 429 303 35 54 0 0 chr10 84944019 84944075 -55372690 + AT_rich Low_complexity Low_complexity 1 56 0 425 348 22 40 chr10 84944223 84944499 -55372266 + Charlie2 DNA MER1_type 1 271 -2511 1066 281 160 18 chr10 84944597 84945442 -55371323 + Charlie2b DNA MER1_type 1140 2104 -678 286 214 86 17 chr10 84945495 84945612 -55371153 + Charlie2b DNA MER1_type 2316 2440 -342 212 208 19 0 chr10 84945866 84945919 -55370846 + A-rich Low_complexity Low_complexity 3 56 0 560 149 0 21 chr10 84946807 84946901 -55369864 - MER8 DNA MER2_type 0 239 148 1272 189 62 4 chr10 84946907 84947166 -55369599 + AluJo SINE Alu 5 278 -34 180 97 0 0 chr10 84947180 84947211 -55369554 + (CAAG)n Simple_repeat Simple_repeat 2 32 0 14299 143 35 11 chr10 84947321 84947487 -55369278 - L1M1 LINE L1 -4098 3467 3307 207 0 0 0 chr10 84947487 84947510 -55369255 + (CAAG)n Simple_repeat Simple_repeat 1 23 0 14299 143 35 11 chr10 84947510 84948415 -55368350 - L1M1 LINE L1 -4258 3307 2426 2286 110 0 7 chr10 84948415 84948725 -55368040 + AluSx SINE Alu 1 308 -4 14299 143 35 11 chr10 84948725 84950069 -55366696 - L1M1 LINE L1 -5139 2426 992 334 250 115 0 chr10 84950077 84950173 -55366592 - L1M4 LINE L1 -534 5880 5774 750 146 0 0 chr10 84950251 84950361 -55366404 + L1M1 LINE L1 1613 1722 -5843 2148 88 0 0 chr10 84950364 84950637 -55366128 - AluSx SINE Alu -39 273 1 1393 263 31 15 chr10 84950637 84951117 -55365648 - L1M4 LINE L1 -2317 4065 3578 22 80 0 0 chr10 84951125 84951175 -55365590 + AT_rich Low_complexity Low_complexity 1 50 0 254 210 84 25 chr10 84951419 84951538 -55365227 - Charlie2 DNA MER1_type -342 2520 2395 2645 260 98 17 chr10 84951583 84952219 -55364546 - L1MEc LINE L1 -2808 3574 2991 192 97 0 0 chr10 84952219 84952250 -55364515 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2645 260 98 17 chr10 84952250 84952901 -55363864 - L1MEc LINE L1 -3391 2991 2210 300 275 92 25 chr10 84952904 84953024 -55363741 - L1MC4 LINE L1 -1340 6702 6575 320 225 85 131 chr10 84953061 84953297 -55363468 - L1MEc LINE L1 -4441 2122 1898 1744 255 47 40 chr10 84953461 84954203 -55362562 - L1MEc LINE L1 -4552 1832 1086 621 200 75 49 chr10 84954206 84954489 -55362276 - L1MCa LINE L1 -3938 2488 2194 * 4620 195 19 40 chr10 84954486 84955166 -55361599 - L1MC1 LINE L1 0 6613 5961 1757 129 3 56 chr10 84955166 84955469 -55361296 - AluSx SINE Alu -23 289 3 4620 195 19 40 chr10 84955469 84955840 -55360925 - L1MC1 LINE L1 -652 5961 5584 * 6188 251 74 17 chr10 84955830 84958153 -55358612 - L1MC1 LINE L1 -1310 5116 2662 1157 102 6 6 chr10 84958277 84958444 -55358321 - AluY SINE Alu -144 167 1 225 232 49 0 chr10 84958445 84958527 -55358238 - L1MC1 LINE L1 -4072 2535 2450 907 162 94 4 chr10 84958567 84958802 -55357963 - L1MC1 LINE L1 -4012 2414 2159 1997 225 79 32 chr10 84958922 84960179 -55356586 - L1M4 LINE L1 -3120 3524 2201 248 257 112 92 chr10 84961789 84962225 -55354540 + HAL1 LINE L1 1483 1927 -580 250 244 103 0 chr10 84962227 84962305 -55354460 - L2 LINE L2 -8 3305 3220 861 276 66 70 chr10 84962355 84962812 -55353953 - MER21B LTR ERV1 -124 807 329 493 366 14 11 chr10 84962957 84963241 -55353524 + LTR16A LTR ERVL 18 302 -148 3719 150 68 102 chr10 84963243 84964114 -55352651 - Tigger3b DNA MER2_type -1 1231 391 303 302 79 15 chr10 84964336 84964468 -55352297 - LTR16A LTR ERVL 0 457 306 2212 163 31 3 chr10 84964473 84964859 -55351906 + Tigger3b DNA MER2_type 2 398 -833 1336 187 37 17 chr10 84964861 84965040 -55351725 - L1M4 LINE L1 -5086 1456 1282 1790 173 51 15 chr10 84965040 84965376 -55351389 - MER7A DNA MER2_type 0 346 1 1336 187 37 17 chr10 84965376 84965544 -55351221 - L1M4 LINE L1 -5260 1282 1102 * 1487 331 21 77 chr10 84965537 84966281 -55350484 - L1M4 LINE L1 -5826 716 14 277 278 57 16 chr10 84967221 84967415 -55349350 - L1M4 LINE L1 -1488 4658 4457 237 299 0 13 chr10 84967457 84967545 -55349220 + CT-rich Low_complexity Low_complexity 2 145 0 349 284 106 55 chr10 84967603 84967821 -55348944 - L1M4 LINE L1 -1871 4275 4047 241 135 39 0 chr10 84967850 84967902 -55348863 + (TA)n Simple_repeat Simple_repeat 2 55 0 2345 110 0 0 chr10 84967919 84968229 -55348536 - AluSx SINE Alu -2 310 1 23 33 0 0 chr10 84968349 84968379 -55348386 + AT_rich Low_complexity Low_complexity 1 30 0 343 352 57 13 chr10 84968396 84968626 -55348139 - L1M4 LINE L1 -2292 3854 3615 713 323 72 17 chr10 84968979 84969433 -55347332 + L2 LINE L2 2752 3239 -74 2353 72 0 10 chr10 84969681 84969988 -55346777 - AluY SINE Alu -7 304 1 257 311 11 0 chr10 84970289 84970379 -55346386 + (CTA)n Simple_repeat Simple_repeat 1 91 0 2112 258 83 20 chr10 84970539 84971959 -55344806 - L1ME1 LINE L1 -65 6101 4601 22 0 0 0 chr10 84972416 84972438 -55344327 + AT_rich Low_complexity Low_complexity 1 22 0 482 329 42 40 chr10 84972664 84973044 -55343721 - L1MC4a LINE L1 -1935 5873 5493 209 356 11 11 chr10 84973049 84973136 -55343629 - L2 LINE L2 -1 3271 3185 21 0 0 0 chr10 84973307 84973328 -55343437 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 84973445 84973472 -55343293 + AT_rich Low_complexity Low_complexity 1 27 0 356 191 0 0 chr10 84973940 84974003 -55342762 + MLT1E2 LTR MaLR 89 151 -503 746 264 119 47 chr10 84974093 84974411 -55342354 + MLT1E2 LTR MaLR 208 548 -78 261 0 0 0 chr10 84974426 84974455 -55342310 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1508 130 41 27 chr10 84974463 84974756 -55342009 - L1MA9 LINE L1 -11 6301 6005 554 175 88 0 chr10 84974759 84974873 -55341892 - L1MA9 LINE L1 -593 5719 5596 1452 163 36 30 chr10 84974882 84975291 -55341474 - L1MA9 LINE L1 -754 5392 5057 239 286 0 0 chr10 84976049 84976105 -55340660 - HAL1 LINE L1 -619 1888 1833 401 327 20 20 chr10 84976161 84976311 -55340454 + LTR33 LTR ERVL 9 158 -363 194 291 18 0 chr10 84976689 84976744 -55340021 + MIR SINE MIR 101 156 -106 3903 156 16 4 chr10 84977011 84977708 -55339057 - L1MA6 LINE L1 -184 6116 5412 837 164 79 0 chr10 84977713 84977890 -55338875 + L1MA6 LINE L1 6106 6296 -4 212 296 111 93 chr10 84978527 84978666 -55338099 + MIR3 SINE MIR 27 171 -37 3117 27 0 5 chr10 84978666 84979037 -55337728 - L1PA3 LINE L1 -1 6154 5786 212 296 111 93 chr10 84979037 84979059 -55337706 + MIR3 SINE MIR 171 191 -17 324 0 0 0 chr10 84981117 84981153 -55335612 + (TG)n Simple_repeat Simple_repeat 2 37 0 1013 171 11 16 chr10 84981871 84982058 -55334707 - MER5A DNA MER1_type -3 186 1 469 318 182 24 chr10 84983133 84983735 -55333030 - L2 LINE L2 -1 3312 2623 300 220 70 30 chr10 84984398 84984498 -55332267 + MIR SINE MIR 49 152 -110 287 328 59 0 chr10 84984807 84984926 -55331839 + L2 LINE L2 3188 3313 0 * 584 354 57 22 chr10 84984908 84985224 -55331541 - L2 LINE L2 -1 3312 2986 1361 298 144 34 chr10 84985366 84986100 -55330665 - L2 LINE L2 -513 2801 1987 474 209 11 11 chr10 84986239 84986330 -55330435 + MER50 LTR ERV1 621 711 -23 513 115 0 0 chr10 84987409 84987496 -55329269 + (TA)n Simple_repeat Simple_repeat 1 87 0 22 0 0 0 chr10 84987970 84987992 -55328773 + AT_rich Low_complexity Low_complexity 1 22 0 297 243 108 61 chr10 84988874 84989088 -55327677 - L1MCc LINE L1 -4922 640 417 235 345 53 18 chr10 84989380 84989493 -55327272 - L1MCc LINE L1 -5618 452 336 347 311 7 68 chr10 84989658 84989806 -55326959 - L1MCc LINE L1 -5890 180 42 2013 128 27 0 chr10 84989883 84990181 -55326584 + AluSg SINE Alu 1 306 -4 321 125 16 16 chr10 84991490 84991554 -55325211 - L1MC1 LINE L1 0 6333 6270 7088 106 10 21 chr10 84991554 84992637 -55324128 - MER11C LTR ERVK 0 1071 1 5001 46 5 26 chr10 84992637 84993284 -55323481 - HERVK11 LTR ERVK 0 7953 7321 1010 92 0 20 chr10 84993267 84993420 -55323345 + HERVK11 LTR ERVK 3323 3472 -4481 * 3588 254 21 24 chr10 84993421 84994199 -55322566 - L1MC1 LINE L1 -72 6261 5487 2558 196 33 2 chr10 84994225 84994741 -55322024 - L1MC/D LINE L1 -563 5796 5265 22 70 0 0 chr10 84995988 84996031 -55320734 + AT_rich Low_complexity Low_complexity 1 43 0 452 272 60 60 chr10 84996060 84996328 -55320437 - L1ME3A LINE L1 -12 6158 5891 * 1955 246 26 29 chr10 84996325 84996906 -55319859 + L1MD2 LINE L1 5778 6356 -3 1252 272 42 18 chr10 84997325 84997841 -55318924 + L1MC4 LINE L1 6458 7059 -834 * 1301 268 70 31 chr10 84997835 84997967 -55318798 + L1MC4 LINE L1 7338 7463 -579 2189 141 8 27 chr10 84997967 84998336 -55318429 - THE1B LTR MaLR -2 362 1 1301 268 70 31 chr10 84998336 84998744 -55318021 + L1MC4 LINE L1 7463 7899 -143 2138 98 0 0 chr10 84999303 84999607 -55317158 + AluY SINE Alu 10 313 0 408 290 49 87 chr10 85000022 85000308 -55316457 - HAL1 LINE L1 -868 1639 1365 1045 130 26 0 chr10 85000364 85000556 -55316209 - L1MA4 LINE L1 0 6300 6104 27 49 0 0 chr10 85000641 85000682 -55316083 + AT_rich Low_complexity Low_complexity 1 41 0 1501 258 89 13 chr10 85000836 85001374 -55315391 - L1MC4a LINE L1 0 7808 7230 909 233 55 37 chr10 85001381 85001652 -55315113 - MLT1E LTR MaLR 0 593 318 1310 284 75 19 chr10 85001758 85002328 -55314437 - L1MC4a LINE L1 -1953 5855 5254 300 299 41 74 chr10 85002342 85002586 -55314179 - L1MC4a LINE L1 -918 5228 4993 258 0 23 45 chr10 85002589 85002633 -55314132 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 7642 19 4 4 chr10 85002633 85003601 -55313164 - L1PA2 LINE L1 -16 6139 5172 1382 92 5 0 chr10 85003701 85003897 -55312868 - L1P LINE L1 -5937 209 13 438 314 33 54 chr10 85003890 85004135 -55312630 - L1MC4a LINE L1 -1148 4998 4749 * 2155 114 0 3 chr10 85004135 85004434 -55312331 - AluSg SINE Alu -12 298 1 438 314 33 54 chr10 85004434 85004707 -55312058 - L1MC4a LINE L1 -1397 4749 4491 907 185 0 0 chr10 85004783 85004956 -55311809 - L1 LINE L1 -2145 4001 3829 6447 122 18 24 chr10 85005039 85006203 -55310562 - L1MA2 LINE L1 0 6304 5146 2356 162 45 12 chr10 85006203 85006623 -55310142 + MER61C LTR ERV1 1 434 0 6447 122 18 24 chr10 85006623 85006662 -55310103 - L1MA2 LINE L1 -1158 5146 5108 848 116 27 27 chr10 85006657 85006804 -55309961 - L1MA2 LINE L1 -398 5906 5760 * 7853 242 10 72 chr10 85006803 85009852 -55306913 - L1M4 LINE L1 -1053 6512 3697 1868 133 7 4 chr10 85009852 85010153 -55306612 - AluSx SINE Alu 0 308 7 7853 242 10 72 chr10 85010153 85010471 -55306294 - L1M4 LINE L1 -3868 3697 3361 * 11263 180 43 22 chr10 85010468 85011355 -55305410 - L1M4 LINE L1 -4899 2666 1799 2262 111 3 0 chr10 85011355 85011653 -55305112 - AluSp SINE Alu -13 300 2 11263 180 43 22 chr10 85011653 85013350 -55303415 - L1M4 LINE L1 -5766 1799 13 1830 230 41 19 chr10 85013368 85013882 -55302883 - L1MB7 LINE L1 -10 6985 6461 1389 235 26 53 chr10 85013878 85014064 -55302701 - L1MB7 LINE L1 -771 6186 5997 * 728 239 0 0 chr10 85014064 85014227 -55302538 - FRAM SINE Alu 0 166 4 1389 235 26 53 chr10 85014227 85014530 -55302235 - L1MB7 LINE L1 -960 5997 5710 29 47 0 0 chr10 85014585 85014628 -55302137 + AT_rich Low_complexity Low_complexity 1 43 0 4442 247 26 47 chr10 85014665 85015771 -55300994 - L1MB7 LINE L1 -2168 4789 3734 2118 132 0 3 chr10 85015771 85016081 -55300684 - AluSg SINE Alu -1 309 1 4442 247 26 47 chr10 85016081 85016754 -55300011 - L1MB7 LINE L1 -3223 3734 3048 1085 273 58 83 chr10 85016798 85018309 -55298456 - L1MB7 LINE L1 -3888 3071 1598 * 4245 174 29 64 chr10 85018305 85018905 -55297860 - L1MA7 LINE L1 0 6291 5743 279 0 0 0 chr10 85018905 85018936 -55297829 + (TG)n Simple_repeat Simple_repeat 2 32 0 4245 174 29 64 chr10 85018936 85019399 -55297366 - L1MA7 LINE L1 -548 5743 5265 808 198 5 21 chr10 85019381 85019573 -55297192 - L1MB7 LINE L1 -5231 1628 1440 * 2946 287 78 35 chr10 85019581 85020820 -55295945 - L1MB7 LINE L1 -5461 1398 107 4058 197 39 3 chr10 85020824 85021570 -55295195 + LTR39 LTR ERV1 1 773 -10 1497 179 4 21 chr10 85021687 85021710 -55295055 - AluJb SINE Alu -12 300 278 6160 62 5 3 chr10 85021710 85022488 -55294277 + LTR17 LTR ERV1 1 780 0 1497 179 4 21 chr10 85022488 85022743 -55294022 - AluJb SINE Alu -34 278 27 266 304 40 40 chr10 85022881 85023006 -55293759 - L1MEc LINE L1 -1988 4227 4103 210 191 0 0 chr10 85023097 85023144 -55293621 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1539 246 67 13 chr10 85023159 85023871 -55292894 - L1MEc LINE L1 -3329 2886 2170 665 334 78 50 chr10 85023887 85024216 -55292549 + L2 LINE L2 2508 2826 -487 1826 180 49 0 chr10 85024216 85024544 -55292221 + MER2 DNA MER2_type 1 344 0 665 334 78 50 chr10 85024544 85024989 -55291776 + L2 LINE L2 2826 3310 -3 353 348 58 13 chr10 85025823 85025978 -55290787 + MIR SINE MIR 2 163 -99 5917 150 55 37 chr10 85025978 85027188 -55289577 - Tigger3b DNA MER2_type 0 1231 1 232 312 43 0 chr10 85027240 85027333 -55289432 - MIR SINE MIR -6 256 160 243 196 39 0 chr10 85027527 85027578 -55289187 - MER20 DNA MER1_type -1 218 166 536 165 91 16 chr10 85027588 85027709 -55289056 + L1MB7 LINE L1 5998 6127 -57 939 75 15 0 chr10 85027720 85027853 -55288912 - L1PA5 LINE L1 -5 6149 6015 419 299 34 14 chr10 85027853 85027989 -55288776 - MER20 DNA MER1_type -53 166 25 191 61 30 0 chr10 85028189 85028222 -55288543 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 12783 201 29 9 chr10 85028617 85032364 -55284401 - L1PA13 LINE L1 -11 6152 2359 243 0 0 0 chr10 85033307 85033334 -55283431 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 86 0 4 chr10 85033338 85033618 -55283147 - AluY SINE Alu -32 279 1 474 242 164 15 chr10 85033684 85033953 -55282812 - MER5C DNA MER1_type -1 323 15 523 243 165 17 chr10 85034166 85034524 -55282241 + L1M4 LINE L1 3279 3689 -2457 592 268 21 30 chr10 85034556 85034791 -55281974 + L1M4 LINE L1 3796 4028 -2118 3922 178 161 15 chr10 85034791 85036205 -55280560 + MER52A LTR ERV1 1 1755 0 862 293 57 0 chr10 85036205 85036505 -55280260 + L1M4 LINE L1 4025 4341 -1805 3167 124 42 11 chr10 85036505 85037059 -55279706 + L1MA3 LINE L1 5735 6305 0 462 217 99 37 chr10 85037065 85037275 -55279490 + L1ME1 LINE L1 5891 6108 -56 369 75 0 0 chr10 85038313 85038366 -55278399 + (CA)n Simple_repeat Simple_repeat 2 54 0 2771 264 100 21 chr10 85038501 85039851 -55276914 + L1MD2 LINE L1 3237 4693 -1453 3562 241 65 21 chr10 85039890 85041159 -55275606 + L1MD2 LINE L1 5015 6343 -16 229 194 28 14 chr10 85041632 85041704 -55275061 + L1MD2 LINE L1 6285 6357 -2 183 313 19 100 chr10 85041920 85041967 -55274798 + MIR SINE MIR 106 155 -107 2170 44 44 11 chr10 85041967 85042268 -55274497 + AluY SINE Alu 2 311 0 183 313 19 100 chr10 85042268 85042379 -55274386 + MIR SINE MIR 155 252 -10 982 144 11 29 chr10 85042453 85042627 -55274138 - MER58B DNA MER1_type -6 335 165 263 293 41 41 chr10 85042786 85042909 -55273856 - L2 LINE L2 -459 2855 2733 640 309 93 51 chr10 85043043 85043396 -55273369 - L2 LINE L2 -363 2951 2584 306 87 0 0 chr10 85043681 85043727 -55273038 + (TC)n Simple_repeat Simple_repeat 2 47 0 204 208 28 14 chr10 85043726 85043798 -55272967 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 * 22 0 0 0 chr10 85043883 85043905 -55272860 + AT_rich Low_complexity Low_complexity 1 22 0 430 244 28 89 chr10 85044399 85044579 -55272186 + MER92C LTR ERV1 1 169 -385 271 80 160 0 chr10 85044671 85044721 -55272044 + MER92C LTR ERV1 497 554 0 236 278 0 11 chr10 85045591 85045681 -55271084 + L1ME LINE L1 5705 5793 -371 230 243 14 29 chr10 85046753 85046823 -55269942 + (CATA)n Simple_repeat Simple_repeat 2 70 0 225 269 15 0 chr10 85048417 85048484 -55268281 + L1M4 LINE L1 2133 2200 -3946 * 240 186 34 0 chr10 85048471 85048530 -55268235 - L1MC4 LINE L1 -1323 6719 6659 1053 150 0 0 chr10 85048536 85048716 -55268049 + (TA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr10 85048718 85048752 -55268013 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 555 256 123 10 chr10 85048814 85048910 -55267855 + L1M4 LINE L1 2233 2317 -3829 2615 128 34 0 chr10 85048910 85049324 -55267441 - MSTA LTR MaLR 0 428 1 13973 142 17 29 chr10 85049331 85051777 -55264988 + Tigger1 DNA MER2_type 2 2417 -1 555 256 123 10 chr10 85051777 85052055 -55264710 + L1M4 LINE L1 2322 2658 -3488 752 250 29 0 chr10 85052058 85052230 -55264535 + MER45A DNA AcHobo 2 178 0 1465 60 0 0 chr10 85052260 85052444 -55264321 - L1PB1 LINE L1 -2 6149 5966 257 231 0 0 chr10 85052444 85052496 -55264269 + LTR30 LTR ERV1 1 52 -670 463 70 4 0 chr10 85052496 85052580 -55264185 + LTR12 LTR ERV1 53 251 -463 394 266 16 0 chr10 85052580 85052704 -55264061 + LTR30 LTR ERV1 517 642 -80 275 227 0 40 chr10 85052684 85052759 -55264006 + LTR30 LTR ERV1 553 624 -98 * 759 160 25 0 chr10 85052759 85052878 -55263887 + LTR12 LTR ERV1 359 480 -234 4814 147 17 28 chr10 85052879 85053535 -55263230 - L1PB1 LINE L1 -182 5969 5307 1833 166 3 0 chr10 85053535 85053825 -55262940 - AluSx SINE Alu -21 291 1 4814 147 17 28 chr10 85053825 85054569 -55262196 - L1PB1 LINE L1 -844 5307 4571 233 311 68 14 chr10 85054691 85054765 -55262000 - MER5A DNA MER1_type -57 132 55 2385 156 25 0 chr10 85055853 85056296 -55260469 + L1MA6 LINE L1 5847 6300 0 186 274 16 48 chr10 85056309 85056371 -55260394 - MER5A DNA MER1_type -48 141 82 191 343 166 18 chr10 85056748 85057025 -55259740 - L2 LINE L2 -5 3308 2991 230 409 43 0 chr10 85059394 85059487 -55257278 + L2 LINE L2 3151 3247 -25 183 419 0 0 chr10 85059729 85059822 -55256943 - L2 LINE L2 -13 3300 3208 751 209 181 61 chr10 85059866 85060258 -55256507 - LTR8A LTR ERV1 0 727 289 339 232 113 65 chr10 85060432 85060587 -55256178 - MER87 LTR ERV1 -387 154 1 854 278 60 17 chr10 85060596 85060898 -55255867 - HUERS-P1 LTR ERV1 -2 6261 5947 301 313 23 16 chr10 85060982 85061110 -55255655 - MER57-int LTR ERV1 -502 4452 4324 * 323 333 50 13 chr10 85061003 85061162 -55255603 - MER70-int LTR ERVL -321 4702 4538 6433 173 78 35 chr10 85061467 85063080 -55253685 - MER57-int LTR ERV1 -57 6274 4569 1428 156 100 52 chr10 85063080 85063369 -55253396 + AluSx SINE Alu 1 303 -9 6433 173 78 35 chr10 85063369 85063500 -55253265 - MER57-int LTR ERV1 -1762 4569 4445 1679 190 90 58 chr10 85063478 85063947 -55252818 - MER57-int LTR ERV1 -3349 4771 4288 * 2701 171 16 54 chr10 85063936 85064562 -55252203 - MER57-int LTR ERV1 -2624 3322 2721 3199 130 99 129 chr10 85064589 85065957 -55250808 + pTR5 LTR ERV1 5 691 -23 695 219 62 0 chr10 85065966 85066126 -55250639 - MER57-int LTR ERV1 -4577 2960 2791 3285 126 33 41 chr10 85066148 85066728 -55250037 - LTR39 LTR ERV1 -208 575 1 272 227 31 94 chr10 85067333 85067461 -55249304 - MER21B LTR ERV1 -170 693 574 3972 116 140 114 chr10 85067564 85068909 -55247856 + pTR5 LTR ERV1 743 2438 0 2170 102 20 0 chr10 85069077 85069370 -55247395 + AluSp SINE Alu 1 299 -14 300 233 22 44 chr10 85069479 85069569 -55247196 + MLT1J2 LTR MaLR 357 444 -6 29 60 0 0 chr10 85069575 85069625 -55247140 + AT_rich Low_complexity Low_complexity 1 50 0 339 261 39 34 chr10 85069625 85069850 -55246915 - L1 LINE L1 -2158 3988 3757 204 332 233 21 chr10 85069874 85070201 -55246564 + L2 LINE L2 2645 3036 -277 282 303 141 35 chr10 85070366 85070564 -55246201 - LTR16A LTR ERVL -9 441 223 198 0 0 0 chr10 85070680 85070702 -55246063 + (T)n Simple_repeat Simple_repeat 1 22 0 347 358 37 0 chr10 85070715 85070877 -55245888 - LTR16A1 LTR ERVL -289 168 1 350 308 109 45 chr10 85071108 85071355 -55245410 + L2 LINE L2 3028 3290 -23 1641 186 22 0 chr10 85071405 85071716 -55245049 - L1MC1 LINE L1 -11 6322 6005 2070 153 5 16 chr10 85071788 85072067 -55244698 - L1MC1 LINE L1 -438 5895 5620 2474 144 62 7 chr10 85072067 85072107 -55244658 + LOR1b LTR ERV1 1 37 -424 2252 112 0 13 chr10 85072107 85072419 -55244346 - AluY SINE Alu -3 308 1 2474 144 62 7 chr10 85072419 85072815 -55243950 + LOR1b LTR ERV1 37 461 0 2070 153 5 16 chr10 85072815 85072913 -55243852 - L1MC1 LINE L1 -713 5620 5522 774 281 77 65 chr10 85073232 85073816 -55242949 - L1 LINE L1 -2873 3273 2683 556 308 70 23 chr10 85074366 85074762 -55242003 - L1ME LINE L1 -437 5684 5269 27 73 0 0 chr10 85075232 85075287 -55241478 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr10 85075318 85075341 -55241424 + AT_rich Low_complexity Low_complexity 1 23 0 182 286 20 0 chr10 85075418 85075467 -55241298 - MER5B DNA MER1_type -49 129 80 325 330 32 60 chr10 85076729 85076914 -55239851 - MIR3 SINE MIR -13 195 16 23 68 0 0 chr10 85078833 85078877 -55237888 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 85079528 85079578 -55237187 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr10 85080007 85080030 -55236735 + AT_rich Low_complexity Low_complexity 1 23 0 2112 84 0 10 chr10 85080440 85080738 -55236027 - L1PB1 LINE L1 -492 5659 5365 3231 107 8 4 chr10 85080740 85081219 -55235546 + L1PB1 LINE L1 5671 6151 0 1087 280 50 35 chr10 85081478 85081938 -55234827 + L1MCc LINE L1 19 485 -5938 1496 190 37 17 chr10 85082049 85082402 -55234363 + MLT1A1 LTR MaLR 4 363 -2 717 256 109 71 chr10 85082643 85083015 -55233750 + L1MCc LINE L1 979 1335 -5573 2467 50 0 7 chr10 85083015 85083312 -55233453 + AluY SINE Alu 1 295 -16 717 256 109 71 chr10 85083312 85083942 -55232823 + L1MCc LINE L1 1335 2017 -4891 207 229 0 21 chr10 85084547 85084595 -55232170 + L2 LINE L2 3265 3311 -2 202 361 31 10 chr10 85085866 85085963 -55230802 - MIR SINE MIR -76 132 34 3243 178 33 13 chr10 85086015 85086622 -55230143 + LTR31 LTR ERV1 1 619 0 301 389 0 0 chr10 85087093 85087219 -55229546 + HERVS71 LTR ERV1 1464 1589 -5948 1201 178 21 66 chr10 85087273 85087559 -55229206 + LTR57-int LTR ERVL 310 582 -4761 780 179 96 79 chr10 85087295 85087701 -55229064 + HERVS71 LTR ERV1 1521 1951 -2334 * 559 162 46 70 chr10 85087688 85087894 -55228871 + HERVS71 LTR ERV1 1390 1552 -234 * 309 179 15 0 chr10 85087884 85087951 -55228814 + HERVS71 LTR ERV1 3201 3268 -3063 * 905 343 47 42 chr10 85089871 85090602 -55226163 + HERVS71 LTR ERV1 2571 3304 -3818 277 376 8 8 chr10 85090605 85090738 -55226027 + HERVS71 LTR ERV1 4889 5021 -3957 620 324 40 60 chr10 85090950 85091792 -55224973 + HERVS71 LTR ERV1 5341 7604 -516 2245 117 0 0 chr10 85093484 85093783 -55222982 + AluSc SINE Alu 1 299 -10 3124 192 31 7 chr10 85093848 85094452 -55222313 + LTR31 LTR ERV1 1 619 0 443 290 28 97 chr10 85094908 85095198 -55221567 - L2 LINE L2 -550 2764 2495 403 286 77 12 chr10 85095271 85095439 -55221326 + MIR SINE MIR 34 212 -50 358 333 83 11 chr10 85095462 85095642 -55221123 - MIR SINE MIR 0 262 70 282 253 13 0 chr10 85095935 85096010 -55220755 + (TA)n Simple_repeat Simple_repeat 2 77 0 2537 68 0 0 chr10 85096459 85096769 -55219996 + AluY SINE Alu 2 311 0 364 327 9 0 chr10 85097277 85097387 -55219378 + (TG)n Simple_repeat Simple_repeat 2 112 0 714 268 162 46 chr10 85097920 85098248 -55218517 + MLT1E LTR MaLR 1 366 -227 5027 176 30 53 chr10 85098249 85100060 -55216705 - L1 LINE L1 -2671 4894 3089 1360 264 31 14 chr10 85100061 85100577 -55216188 - L1M4 LINE L1 -3444 2702 2178 553 321 31 37 chr10 85100581 85101089 -55215676 + L1ME3A LINE L1 4523 5027 -1119 * 1135 196 25 0 chr10 85101088 85101328 -55215437 - L1PB1 LINE L1 -3740 2406 2161 1016 207 22 5 chr10 85101328 85101550 -55215215 + L1PB1 LINE L1 2423 2648 -3498 * 5297 168 10 44 chr10 85101531 85103639 -55213126 + L1PB1 LINE L1 4157 6192 0 687 299 113 18 chr10 85103650 85104345 -55212420 + L1ME3A LINE L1 5043 5811 -351 2059 120 0 0 chr10 85104348 85104657 -55212108 - AluSq SINE Alu 0 309 1 321 344 10 0 chr10 85104720 85104816 -55211949 - MER5A DNA MER1_type -83 106 10 870 276 53 16 chr10 85104818 85105137 -55211628 + L1ME3A LINE L1 5791 6121 -49 383 98 16 0 chr10 85105146 85105207 -55211558 + (TA)n Simple_repeat Simple_repeat 1 62 0 4022 207 23 48 chr10 85105495 85106405 -55210360 + L1MB5 LINE L1 4383 5217 -957 237 33 0 0 chr10 85106405 85106435 -55210330 + (TG)n Simple_repeat Simple_repeat 1 30 0 4022 207 23 48 chr10 85106435 85107370 -55209395 + L1MB5 LINE L1 5217 6174 0 237 290 30 76 chr10 85108040 85108171 -55208594 - MIR SINE MIR -96 166 42 1033 256 46 52 chr10 85109405 85109729 -55207036 - MLT1H LTR MaLR -222 327 6 17400 137 10 11 chr10 85109769 85116182 -55200583 + L1PA8A LINE L1 4 6445 -1 1677 198 10 0 chr10 85116808 85117116 -55199649 + AluJo SINE Alu 1 311 -1 814 180 0 16 chr10 85117128 85117244 -55199521 + GA-rich Low_complexity Low_complexity 1 114 -66 2398 72 0 0 chr10 85117244 85117535 -55199230 + AluSc SINE Alu 1 291 -18 814 180 0 16 chr10 85117535 85117601 -55199164 + GA-rich Low_complexity Low_complexity 114 180 0 22 56 0 0 chr10 85117753 85117789 -55198976 + AT_rich Low_complexity Low_complexity 1 36 0 369 346 45 40 chr10 85117874 85118076 -55198689 - L2 LINE L2 -2793 521 319 241 361 69 28 chr10 85118284 85118428 -55198337 - MIR SINE MIR -108 154 5 25 0 0 0 chr10 85119008 85119033 -55197732 + AT_rich Low_complexity Low_complexity 1 25 0 230 167 74 0 chr10 85119033 85119087 -55197678 - L1ME LINE L1 -279 5887 5830 22 35 0 0 chr10 85119087 85119116 -55197649 + AT_rich Low_complexity Low_complexity 1 29 0 7637 99 11 1 chr10 85119124 85121007 -55195758 - L1PA7 LINE L1 -15 6139 4236 3741 88 9 2 chr10 85121007 85121539 -55195226 - L1P LINE L1 -1682 4464 3929 269 272 0 86 chr10 85121924 85122005 -55194760 + L2 LINE L2 3238 3311 -2 2351 35 0 0 chr10 85122311 85122593 -55194172 - L1PA2 LINE L1 0 6155 5874 2819 25 0 0 chr10 85122593 85122918 -55193847 + L1PA2 LINE L1 5550 5874 -281 496 347 57 17 chr10 85123367 85123667 -55193098 + L2 LINE L2 3002 3313 0 839 301 58 84 chr10 85124243 85124860 -55191905 + L1ME3A LINE L1 615 1215 -4904 25 31 0 0 chr10 85125046 85125078 -55191687 + AT_rich Low_complexity Low_complexity 1 32 0 1673 103 40 4 chr10 85125199 85125452 -55191313 - L1PA11 LINE L1 -6 6168 5907 1163 137 186 0 chr10 85125749 85126041 -55190724 + L1MA4A LINE L1 5220 5559 -744 459 198 241 0 chr10 85126537 85126653 -55190112 + MER61D LTR ERV1 340 483 -18 2872 168 117 18 chr10 85126669 85127328 -55189437 + L1MA4A LINE L1 5556 6279 -24 244 319 109 17 chr10 85127331 85128039 -55188726 + L1ME3A LINE L1 2458 3230 -2899 420 262 47 39 chr10 85128096 85128352 -55188413 - L1M4 LINE L1 -2207 3939 3682 351 299 87 32 chr10 85128420 85128824 -55187941 + L1ME3A LINE L1 4925 5350 -779 * 373 233 99 76 chr10 85128809 85129071 -55187694 + L1ME3A LINE L1 5673 5940 -213 246 378 42 7 chr10 85129267 85129410 -55187355 + L2 LINE L2 3128 3275 -38 273 359 24 59 chr10 85129564 85129854 -55186911 + HAL1 LINE L1 237 516 -1991 * 6269 220 37 1 chr10 85129837 85131332 -55185433 + L1PA15 LINE L1 3063 4610 -1536 6092 217 87 18 chr10 85131332 85132826 -55183939 - MER52A LTR ERV1 0 1755 46 5478 122 26 11 chr10 85133676 85135201 -55181564 + L1PA15 LINE L1 4624 6161 -4 264 225 101 54 chr10 85135235 85135364 -55181401 + HAL1 LINE L1 793 927 -1580 253 296 32 8 chr10 85135468 85135593 -55181172 + HAL1 LINE L1 2264 2391 -116 295 198 0 23 chr10 85135697 85135783 -55180982 + (TA)n Simple_repeat Simple_repeat 2 85 0 1199 278 52 21 chr10 85136266 85136651 -55180114 + LTR16A LTR ERVL 51 447 -3 282 308 43 34 chr10 85137452 85137660 -55179105 - MLT1J LTR MaLR -8 503 294 206 0 69 0 chr10 85138051 85138080 -55178685 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1856 146 7 0 chr10 85138082 85138363 -55178402 - AluSx SINE Alu -29 283 1 1296 270 33 14 chr10 85138654 85139084 -55177681 - L1MB8 LINE L1 0 6178 5741 2686 97 11 3 chr10 85139084 85139456 -55177309 + THE1C LTR MaLR 1 375 0 1088 118 20 7 chr10 85139456 85139659 -55177106 + THE1C-int LTR MaLR 1 209 -1424 313 149 26 97 chr10 85139636 85139750 -55177015 + L1M4 LINE L1 5124 5229 -917 * 232 250 0 0 chr10 85140317 85140369 -55176396 + LTR30 LTR ERV1 1 52 -670 1306 153 34 75 chr10 85140369 85140700 -55176065 + LTR12 LTR ERV1 55 285 -429 307 234 64 0 chr10 85140701 85140795 -55175970 + LTR30 LTR ERV1 553 652 -70 722 102 0 0 chr10 85140795 85140893 -55175872 + LTR12 LTR ERV1 617 714 0 397 330 89 40 chr10 85141382 85141731 -55175034 + L1MC4a LINE L1 5596 5964 -157 2699 26 0 0 chr10 85141788 85142094 -55174671 + AluYa5 SINE Alu 1 306 -5 239 229 0 0 chr10 85142170 85142218 -55174547 + HAL1b LINE L1 410 457 -891 501 83 0 0 chr10 85142464 85142536 -55174229 + Alu SINE Alu 230 301 -11 24 67 0 0 chr10 85142902 85142947 -55173818 + AT_rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr10 85143062 85143089 -55173676 + AT_rich Low_complexity Low_complexity 1 27 0 303 256 116 0 chr10 85143731 85143860 -55172905 + L1ME LINE L1 5694 5837 -333 26 50 0 0 chr10 85144034 85144074 -55172691 + AT_rich Low_complexity Low_complexity 1 40 0 389 320 95 37 chr10 85144123 85144586 -55172179 - L1M4 LINE L1 -2912 3234 2745 5281 141 16 2 chr10 85145374 85146524 -55170241 + L1PA16 LINE L1 4995 6157 -9 355 315 89 25 chr10 85146734 85146937 -55169828 + MIR SINE MIR 41 256 -6 1953 150 41 15 chr10 85147273 85147612 -55169153 + MER7A DNA MER2_type 1 346 0 22 0 0 0 chr10 85148442 85148464 -55168301 + AT_rich Low_complexity Low_complexity 1 22 0 327 25 0 0 chr10 85149562 85149602 -55167163 + (TG)n Simple_repeat Simple_repeat 2 41 0 402 283 109 22 chr10 85149613 85149797 -55166968 - HAL1 LINE L1 -1262 1245 1046 263 254 183 8 chr10 85149978 85150104 -55166661 - HAL1 LINE L1 -1570 937 790 273 315 49 56 chr10 85150276 85150419 -55166346 - HAL1 LINE L1 -1789 718 577 356 280 74 46 chr10 85150494 85150669 -55166096 - HAL1 LINE L1 -2132 375 196 554 217 11 69 chr10 85150691 85150880 -55165885 - MER104 DNA MER2_type -2 178 1 639 290 41 44 chr10 85150915 85151562 -55165203 - MER21B LTR ERV1 -149 714 25 519 231 16 55 chr10 85151569 85151751 -55165014 - HAL1 LINE L1 -2320 187 13 4592 194 3 8 chr10 85151763 85152759 -55164006 + L1PA15-16 LINE L1 1996 2989 -3860 953 197 10 5 chr10 85152766 85152969 -55163796 + L1PBa LINE L1 1 204 -6659 * 4787 149 34 14 chr10 85152960 85153811 -55162954 + L1PBa LINE L1 1113 1980 -4883 * 6026 210 31 6 chr10 85153792 85155418 -55161347 + L1PBa LINE L1 2656 4381 -2481 825 177 6 17 chr10 85155422 85155603 -55161162 + L1 LINE L1 2979 3157 -3692 253 259 37 0 chr10 85155612 85155693 -55161072 - L1P LINE L1 -2912 3234 3151 270 118 0 92 chr10 85155697 85155892 -55160873 + (TA)n Simple_repeat Simple_repeat 2 178 0 235 125 0 88 chr10 85155903 85156095 -55160670 + (TA)n Simple_repeat Simple_repeat 1 175 0 2622 201 2 21 chr10 85156138 85156706 -55160059 + L1 LINE L1 3179 3735 -3114 2196 251 43 4 chr10 85156738 85157416 -55159349 + L1 LINE L1 2772 3475 -2671 1123 118 15 26 chr10 85157521 85157716 -55159049 + L1PB1 LINE L1 5958 6150 -1 34 24 0 0 chr10 85157716 85157757 -55159008 + AT_rich Low_complexity Low_complexity 1 41 0 16192 164 18 1 chr10 85157764 85161626 -55155139 + L1PA12 LINE L1 2276 6168 0 2268 102 0 0 chr10 85162457 85162761 -55154004 - AluY SINE Alu -7 304 1 481 314 11 0 chr10 85162818 85162993 -55153772 + (CA)n Simple_repeat Simple_repeat 2 178 0 374 338 38 28 chr10 85163553 85163766 -55152999 - L2 LINE L2 0 3313 3099 2256 81 0 3 chr10 85164209 85164494 -55152271 + AluSc SINE Alu 1 284 -25 865 360 96 12 chr10 85164723 85165328 -55151437 - L2 LINE L2 -790 2524 1869 1272 157 9 5 chr10 85165507 85165723 -55151042 - Tigger1 DNA MER2_type 0 2418 2202 785 173 0 87 chr10 85165711 85165884 -55150881 - Tigger1 DNA MER2_type -2260 158 1 * 1116 190 33 0 chr10 85166216 85166427 -55150338 - MER20 DNA MER1_type -1 218 1 227 258 34 34 chr10 85166489 85166578 -55150187 - L1M2 LINE L1 -4279 2570 2482 326 316 32 29 chr10 85167481 85167794 -55148971 - L1MEc LINE L1 -4840 1556 1243 2258 39 3 14 chr10 85167820 85168144 -55148621 - AluY SINE Alu 0 321 1 322 301 123 33 chr10 85168311 85168587 -55148178 - L1MEc LINE L1 -5258 947 647 241 348 63 19 chr10 85169313 85169471 -55147294 + MIR SINE MIR 92 256 -6 267 294 235 0 chr10 85170242 85170378 -55146387 + MLT1H LTR MaLR 382 549 0 240 284 11 63 chr10 85171010 85171105 -55145660 + L2 LINE L2 2321 2410 -904 1843 74 0 12 chr10 85171652 85171934 -55144831 + AluY SINE Alu 42 320 0 1848 115 72 4 chr10 85172631 85172909 -55143856 + AluSq SINE Alu 1 297 -16 747 147 7 7 chr10 85173245 85173381 -55143384 - FRAM SINE Alu 0 40 1 * 772 185 15 0 chr10 85173381 85173514 -55143251 - AluJb SINE Alu -172 140 6 1505 270 83 22 chr10 85173633 85174355 -55142410 + L1ME1 LINE L1 5405 6332 -2 2014 264 33 66 chr10 85174355 85175173 -55141592 - L1ME1 LINE L1 -46 6120 5331 2704 10 0 0 chr10 85175173 85175472 -55141293 - AluYa5 SINE Alu -12 299 1 2014 264 33 66 chr10 85175472 85175529 -55141236 - L1ME1 LINE L1 -835 5331 5274 12325 236 47 36 chr10 85175546 85178337 -55138428 + L1PB4 LINE L1 12 2769 -4148 2125 79 0 0 chr10 85178337 85178604 -55138161 + AluY SINE Alu 25 291 -20 12325 236 47 36 chr10 85178604 85181836 -55134929 + L1PB4 LINE L1 2769 6174 -743 23 0 0 0 chr10 85181836 85181859 -55134906 + AT_rich Low_complexity Low_complexity 1 23 0 12637 167 35 21 chr10 85181861 85185612 -55131153 - L1MA1 LINE L1 0 6302 2498 3537 178 7 17 chr10 85185657 85186361 -55130404 + L1PB4 LINE L1 6162 6858 0 1225 235 43 115 chr10 85186386 85186982 -55129783 - L1M4 LINE L1 -881 5265 4748 347 156 52 0 chr10 85186982 85187059 -55129706 - L1MA8 LINE L1 -6 6285 6205 1225 235 43 115 chr10 85187059 85187320 -55129445 - L1M4 LINE L1 -1398 4748 4470 1041 244 209 4 chr10 85187397 85187951 -55128814 - L1M4 LINE L1 -2896 3250 2583 1223 223 117 51 chr10 85188088 85188523 -55128242 - L1MCc LINE L1 -5942 481 18 409 318 95 0 chr10 85188539 85188665 -55128100 - MIR SINE MIR -102 160 23 649 260 103 77 chr10 85191648 85192064 -55124701 + MLT1J1 LTR MaLR 15 441 -5 212 262 0 0 chr10 85192661 85192703 -55124062 + (ATG)n Simple_repeat Simple_repeat 2 43 0 374 273 27 9 chr10 85193114 85193224 -55123541 + MIR SINE MIR 116 227 -35 36 62 0 0 chr10 85193250 85193314 -55123451 + AT_rich Low_complexity Low_complexity 1 64 0 183 193 0 105 chr10 85193360 85193417 -55123348 - L2 LINE L2 -1530 1784 1734 244 218 0 0 chr10 85193694 85193749 -55123016 + (CA)n Simple_repeat Simple_repeat 1 55 0 23 54 0 0 chr10 85194740 85194777 -55121988 + AT_rich Low_complexity Low_complexity 1 37 0 231 305 105 0 chr10 85195033 85195128 -55121637 - MIR SINE MIR -59 203 99 200 295 66 16 chr10 85195450 85195511 -55121254 - MIR SINE MIR -107 101 38 280 292 98 1 chr10 85195991 85196097 -55120668 + MIR SINE MIR 40 153 -67 1346 240 3 7 chr10 85196534 85196830 -55119935 - AluJo SINE Alu -17 295 1 2491 64 0 0 chr10 85197569 85197864 -55118901 - AluY SINE Alu -16 295 1 958 171 0 0 chr10 85198419 85198577 -55118188 - FAM SINE Alu -17 158 1 897 330 89 18 chr10 85198790 85199227 -55117538 - MLT1J LTR MaLR -43 468 1 397 358 19 6 chr10 85200547 85200709 -55116056 + L2 LINE L2 643 806 -2508 36172 95 12 9 chr10 85200889 85207019 -55109746 - L1PA6 LINE L1 -7 6147 11 5081 298 70 48 chr10 85207718 85209344 -55107421 + L2 LINE L2 602 2308 -1005 2061 127 7 3 chr10 85209344 85209651 -55107114 + AluSg SINE Alu 1 308 -2 5081 298 70 48 chr10 85209651 85210680 -55106085 + L2 LINE L2 2308 3313 0 308 282 10 82 chr10 85210804 85211010 -55105755 - MLT1K LTR MaLR -3 585 395 32 81 0 0 chr10 85211474 85211548 -55105217 + AT_rich Low_complexity Low_complexity 1 74 0 551 328 58 8 chr10 85211851 85212092 -55104673 - MIR SINE MIR -1 261 9 1640 175 38 10 chr10 85212107 85212398 -55104367 - AluSx SINE Alu -13 299 1 7369 168 42 5 chr10 85212401 85214779 -55101986 - L1MA8 LINE L1 0 7251 4789 284 306 0 0 chr10 85214772 85214844 -55101921 - L1MA8 LINE L1 -3476 3630 3559 * 8186 85 3 10 chr10 85214843 85215977 -55100788 - L1P LINE L1 -4198 1948 823 4853 38 0 0 chr10 85215978 85216557 -55100208 + L1PA4 LINE L1 5571 6149 -6 216 0 0 0 chr10 85216579 85216603 -55100162 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1797 227 27 4 chr10 85216603 85217151 -55099614 - L1MA8 LINE L1 -3538 3568 3007 6205 236 142 31 chr10 85217163 85219406 -55097359 - L1MA8 LINE L1 -4520 2517 1 246 105 0 0 chr10 85220146 85220184 -55096581 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr10 85220424 85220446 -55096319 + AT_rich Low_complexity Low_complexity 1 22 0 837 199 24 34 chr10 85222196 85222402 -55094363 + MER3 DNA MER1_type 5 208 -1 238 186 57 71 chr10 85222740 85222810 -55093955 - L2 LINE L2 0 3313 3245 214 273 79 29 chr10 85223578 85223717 -55093048 - L2 LINE L2 -798 2516 2371 180 0 0 0 chr10 85225265 85225285 -55091480 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 85225844 85225865 -55090900 + AT_rich Low_complexity Low_complexity 1 21 0 325 337 124 5 chr10 85226112 85226305 -55090460 + MIR SINE MIR 44 259 -3 201 347 28 0 chr10 85226613 85226685 -55090080 - MIR3 SINE MIR -54 154 81 1898 139 7 0 chr10 85226731 85227004 -55089761 + AluSx SINE Alu 16 290 -22 235 189 14 27 chr10 85227817 85227891 -55088874 + GA-rich Low_complexity Low_complexity 1 73 0 1099 83 0 0 chr10 85229048 85229181 -55087584 + AluSg1 SINE Alu 1 133 -176 2167 101 0 14 chr10 85229181 85229477 -55087288 + AluSg1 SINE Alu 1 292 -17 455 241 154 37 chr10 85230644 85230806 -55085959 - MER5A DNA MER1_type 0 189 9 1211 222 94 139 chr10 85231255 85232215 -55084550 + MER52A LTR ERV1 527 636 0 2022 107 0 31 chr10 85232363 85232653 -55084112 - AluSg SINE Alu 0 310 30 497 280 78 93 chr10 85232666 85233075 -55083690 - L1ME4a LINE L1 -93 6028 5625 2414 75 0 31 chr10 85233075 85233396 -55083369 + AluY SINE Alu 1 311 0 497 280 78 93 chr10 85233396 85233446 -55083319 - L1ME4a LINE L1 -496 5625 5576 552 310 207 6 chr10 85233550 85234063 -55082702 - L2 LINE L2 -431 2883 2268 2135 121 0 0 chr10 85234737 85235026 -55081739 + AluSg SINE Alu 1 289 -21 2132 144 129 5 chr10 85235690 85236071 -55080694 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr10 85236492 85236516 -55080249 + AT_rich Low_complexity Low_complexity 1 24 0 2126 95 10 14 chr10 85237717 85238012 -55078753 + AluSx SINE Alu 1 294 -18 413 237 51 17 chr10 85238155 85238273 -55078492 + MIR SINE MIR 130 251 -11 743 285 28 44 chr10 85238375 85238624 -55078141 - MIR SINE MIR -6 256 12 1854 103 4 4 chr10 85238961 85239214 -55077551 - MLT2A1 LTR ERVL 0 444 192 282 310 207 7 chr10 85240157 85240302 -55076463 + MIR3 SINE MIR 30 203 -5 184 330 98 52 chr10 85242184 85242239 -55074526 - MIR SINE MIR -25 237 186 4945 86 10 26 chr10 85242239 85242941 -55073824 - LTR8 LTR ERV1 0 691 1 184 330 98 52 chr10 85242941 85243058 -55073707 - MIR SINE MIR -76 186 57 3744 149 18 3 chr10 85243194 85243820 -55072945 - MER41B LTR ERV1 0 635 1 2226 125 0 0 chr10 85244809 85245121 -55071644 + AluSx SINE Alu 1 312 0 355 282 82 46 chr10 85246156 85246351 -55070414 - L1ME LINE L1 -347 5774 5573 1637 163 58 25 chr10 85246385 85246748 -55070017 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 85247994 85248037 -55068728 + AT_rich Low_complexity Low_complexity 1 43 0 281 262 11 0 chr10 85248248 85248335 -55068430 + HAL1b LINE L1 714 784 -800 272 301 23 51 chr10 85248806 85248846 -55067919 + L1MC4a LINE L1 6554 6594 -1214 198 71 0 0 chr10 85248846 85248874 -55067891 + (TG)n Simple_repeat Simple_repeat 2 29 0 272 301 23 51 chr10 85248874 85249009 -55067756 + L1MC4a LINE L1 6594 6724 -1084 * 733 228 0 49 chr10 85249007 85249231 -55067534 + L1MC5 LINE L1 7026 7238 -723 320 274 15 22 chr10 85249293 85249428 -55067337 + L1MC5 LINE L1 7394 7527 -434 24 0 0 0 chr10 85249887 85249911 -55066854 + AT_rich Low_complexity Low_complexity 1 24 0 1320 230 211 13 chr10 85250244 85250863 -55065902 - L1ME3A LINE L1 -205 6359 5618 979 263 126 56 chr10 85250888 85251618 -55065147 - L1ME3A LINE L1 -1714 4826 4149 729 263 134 48 chr10 85251618 85252079 -55064686 + MLT1D LTR MaLR 1 501 -4 979 263 126 56 chr10 85252079 85252228 -55064537 - L1ME3A LINE L1 -2391 4149 4012 2020 126 30 0 chr10 85252228 85252530 -55064235 - AluY SINE Alu 0 311 1 979 263 126 56 chr10 85252530 85252672 -55064093 - L1ME3A LINE L1 -2528 4012 3732 1515 156 20 10 chr10 85252682 85252977 -55063788 - L1MD1 LINE L1 -7 6235 5938 1909 195 36 8 chr10 85252978 85253368 -55063397 - L1MD1 LINE L1 -441 5801 5401 982 177 20 0 chr10 85253369 85253567 -55063198 + L1PB1 LINE L1 3591 3792 -2354 6238 164 15 4 chr10 85253575 85255541 -55061224 + L1PB1 LINE L1 4157 6144 -7 369 43 0 0 chr10 85255543 85255590 -55061175 + (TG)n Simple_repeat Simple_repeat 2 48 0 791 17 15 146 chr10 85255603 85256257 -55060508 + (TA)n Simple_repeat Simple_repeat 1 568 0 322 253 58 0 chr10 85256257 85256344 -55060421 + L1MC4 LINE L1 6612 6703 -1339 1511 203 75 3 chr10 85256368 85256727 -55060038 - L1ME3A LINE L1 -4423 2117 1733 938 215 9 33 chr10 85256741 85256955 -55059810 - MLT1D LTR MaLR -296 209 1 338 235 48 65 chr10 85257010 85257240 -55059525 + L1M4 LINE L1 3695 3920 -2226 32 0 0 0 chr10 85257390 85257422 -55059343 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr10 85257708 85257732 -55059033 + (TG)n Simple_repeat Simple_repeat 1 24 0 1468 240 16 25 chr10 85257772 85258138 -55058627 - MLT1A1 LTR MaLR 0 365 3 24200 151 16 21 chr10 85258556 85264965 -55051800 + L1PA8A LINE L1 4 6444 -2 1945 211 44 2 chr10 85265574 85265981 -55050784 + MSTB LTR MaLR 1 424 -2 5617 201 39 4 chr10 85265982 85267100 -55049665 + MSTB-int LTR MaLR 1 1158 -493 887 216 22 11 chr10 85267158 85267339 -55049426 + MLT2B3 LTR ERVL 251 433 -121 264 141 33 33 chr10 85267341 85267433 -55049332 + (TA)n Simple_repeat Simple_repeat 2 93 0 254 32 0 0 chr10 85267469 85267500 -55049265 + MLT2B3 LTR ERVL 414 444 0 1670 180 18 3 chr10 85267834 85268118 -55048647 - AluJo SINE Alu -24 288 1 464 265 92 56 chr10 85268133 85268500 -55048265 - L1ME3A LINE L1 -307 5855 5478 2046 126 0 10 chr10 85268510 85268811 -55047954 - AluSx SINE Alu -14 298 1 25 75 0 0 chr10 85268991 85269044 -55047721 + AT_rich Low_complexity Low_complexity 1 53 0 552 253 152 6 chr10 85269381 85269539 -55047226 + MER5A DNA MER1_type 9 189 0 24 32 0 0 chr10 85271353 85271384 -55045381 + AT_rich Low_complexity Low_complexity 1 31 0 1060 69 7 28 chr10 85271391 85271536 -55045229 + AluSx SINE Alu 1 142 -171 42893 33 21 1 chr10 85271536 85277563 -55039202 + L1PA2 LINE L1 5 6155 0 25 0 0 0 chr10 85277563 85277588 -55039177 + AT_rich Low_complexity Low_complexity 1 25 0 1073 152 5 35 chr10 85277588 85277786 -55038979 + AluSx SINE Alu 120 311 -1 341 358 48 19 chr10 85278020 85278288 -55038477 - L1ME LINE L1 -299 5822 5547 3810 180 33 15 chr10 85279217 85279996 -55036769 + L1MB2 LINE L1 5377 6169 -2 23 0 0 0 chr10 85280123 85280146 -55036619 + AT_rich Low_complexity Low_complexity 1 23 0 1379 85 15 0 chr10 85280449 85280648 -55036117 + L1MA1 LINE L1 6029 6230 -72 409 229 28 56 chr10 85280646 85280860 -55035905 + L1ME1 LINE L1 2759 2966 -3180 * 2492 229 30 29 chr10 85280864 85281006 -55035759 + L1ME1 LINE L1 3365 3505 -2641 2457 74 3 3 chr10 85281006 85281315 -55035450 + AluY SINE Alu 2 310 -1 2492 229 30 29 chr10 85281315 85281910 -55034855 + L1ME1 LINE L1 3505 4103 -2043 * 3187 257 55 4 chr10 85281908 85282939 -55033826 + L1M4 LINE L1 3735 4818 -1328 230 242 22 0 chr10 85283012 85283103 -55033662 + L1M4 LINE L1 4405 4497 -1649 * 449 303 30 0 chr10 85283096 85283330 -55033435 + L1ME1 LINE L1 4128 4368 -1778 356 226 30 23 chr10 85283397 85283530 -55033235 + L1ME1 LINE L1 4589 4722 -1424 573 239 107 11 chr10 85283538 85283810 -55032955 + L1ME1 LINE L1 4902 5199 -947 1871 84 15 4 chr10 85283939 85284212 -55032553 + L1MA1 LINE L1 6027 6302 0 2321 268 40 22 chr10 85284216 85285028 -55031737 + L1ME1 LINE L1 5349 6334 0 22 70 0 0 chr10 85285180 85285223 -55031542 + AT_rich Low_complexity Low_complexity 1 43 0 373 266 65 68 chr10 85285245 85285757 -55031008 + L1MEc LINE L1 1863 2372 -4024 226 238 119 0 chr10 85285773 85285874 -55030891 + L1MEc LINE L1 2373 2485 -3730 1964 154 127 7 chr10 85286344 85286753 -55030012 + LOR1b LTR ERV1 1 458 -3 2166 71 0 0 chr10 85286971 85287253 -55029512 - L1PA12 LINE L1 0 6168 5887 233 291 13 25 chr10 85287269 85287348 -55029417 + L2 LINE L2 2545 2622 -692 693 179 0 8 chr10 85287348 85287465 -55029300 + FLAM_C SINE Alu 1 116 -17 267 103 0 0 chr10 85287468 85287507 -55029258 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 194 0 39 0 chr10 85288109 85288135 -55028630 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1824 216 40 16 chr10 85288638 85289087 -55027678 + MER31B LTR ERV1 3 462 -4 192 322 23 35 chr10 85289290 85289377 -55027388 + MIR SINE MIR 20 105 -103 186 43 0 0 chr10 85290196 85290219 -55026546 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2872 155 105 72 chr10 85290304 85291008 -55025757 - LTR8A LTR ERV1 0 727 1 370 206 29 0 chr10 85291444 85291546 -55025219 + GA-rich Low_complexity Low_complexity 1 105 0 193 326 111 22 chr10 85291740 85291875 -55024890 - MIR SINE MIR -110 152 6 2597 154 31 22 chr10 85291880 85292370 -55024395 - MER4E LTR ERV1 0 779 103 4894 86 5 5 chr10 85292370 85293037 -55023728 - PABL_B LTR ERV1 0 667 1 2597 154 31 22 chr10 85293037 85293142 -55023623 - MER4E LTR ERV1 -676 103 1 186 321 48 24 chr10 85293372 85293456 -55023309 + MIR SINE MIR 65 150 -112 3690 134 59 78 chr10 85294391 85295184 -55021581 + LTR1 LTR ERV1 8 785 0 459 134 0 24 chr10 85295543 85295625 -55021140 + LTR24B LTR ERV1 4 83 -493 501 270 68 18 chr10 85295809 85296031 -55020734 + LTR24B LTR ERV1 337 569 -7 22 35 0 0 chr10 85296127 85296156 -55020609 + AT_rich Low_complexity Low_complexity 1 29 0 40865 63 7 1 chr10 85296876 85302988 -55013777 + L1PA5 LINE L1 3 6154 0 27 29 0 0 chr10 85303363 85303397 -55013368 + AT_rich Low_complexity Low_complexity 1 34 0 1094 294 74 2 chr10 85303440 85303927 -55012838 - L1M4 LINE L1 -923 5223 4702 204 117 33 33 chr10 85304006 85304066 -55012699 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 277 261 91 18 chr10 85304160 85304325 -55012440 + L1ME3A LINE L1 2176 2352 -3794 584 293 104 32 chr10 85304501 85304940 -55011825 + L1ME3A LINE L1 3525 3931 -2231 1882 127 13 40 chr10 85304940 85305240 -55011525 + AluSx SINE Alu 1 292 -20 584 293 104 32 chr10 85305240 85306976 -55009789 + L1ME3A LINE L1 3931 5866 -296 1957 129 3 7 chr10 85307607 85307917 -55008848 + AluSx SINE Alu 1 309 -3 713 263 73 10 chr10 85308077 85308282 -55008483 - MIR SINE MIR -36 226 9 1027 345 145 22 chr10 85308529 85309683 -55007082 + L2 LINE L2 1080 2375 -939 210 250 0 0 chr10 85310154 85310226 -55006539 + (TA)n Simple_repeat Simple_repeat 2 73 0 362 351 84 0 chr10 85310676 85310901 -55005864 - L1ME LINE L1 -399 5754 5511 311 254 85 63 chr10 85310928 85311259 -55005506 - L1ME LINE L1 -699 5435 5104 915 223 84 0 chr10 85311469 85311671 -55005094 + MER58A DNA MER1_type 1 219 -5 295 320 30 0 chr10 85311734 85311834 -55004931 - L1ME LINE L1 -1311 4818 4716 291 300 31 6 chr10 85311948 85312108 -55004657 - L1ME LINE L1 -1576 4553 4390 * 483 264 82 25 chr10 85312103 85312383 -55004382 - L1ME LINE L1 -5008 1111 816 2330 93 0 3 chr10 85313604 85313904 -55002861 - AluSq SINE Alu -14 299 1 457 280 99 65 chr10 85313971 85314435 -55002330 + L1M4 LINE L1 2475 2954 -3192 199 172 17 17 chr10 85314776 85314834 -55001931 + (TA)n Simple_repeat Simple_repeat 1 58 0 24 0 0 0 chr10 85316027 85316051 -55000714 + AT_rich Low_complexity Low_complexity 1 24 0 1153 317 69 35 chr10 85316997 85317528 -54999237 + MLT1G1 LTR MaLR 3 595 0 533 152 0 54 chr10 85318579 85318617 -54998148 + MER6B DNA MER2_type 1 40 -104 3323 137 73 36 chr10 85318617 85319247 -54997518 + MER39B LTR ERV1 1 653 0 533 152 0 54 chr10 85319247 85319300 -54997465 + MER6B DNA MER2_type 40 87 -123 225 239 15 0 chr10 85319531 85319598 -54997167 + L1M4 LINE L1 2694 2761 -3385 * 970 148 27 110 chr10 85319588 85319851 -54996914 + L1MA5 LINE L1 6059 6299 -1 1240 264 165 2 chr10 85319860 85320485 -54996280 + L1M4 LINE L1 2756 3482 -2664 238 392 69 0 chr10 85320485 85320615 -54996150 - MIR SINE MIR -104 158 20 714 235 108 0 chr10 85320678 85320844 -54995921 + MER5A DNA MER1_type 1 184 -5 21 36 0 0 chr10 85321693 85321721 -54995044 + AT_rich Low_complexity Low_complexity 1 28 0 3365 144 19 46 chr10 85322146 85322821 -54993944 - L1MC2 LINE L1 -8 6336 5680 560 301 6 24 chr10 85324199 85324538 -54992227 + L1M4 LINE L1 3118 3450 -2696 398 270 59 82 chr10 85324661 85325002 -54991763 + L1M4 LINE L1 3546 3878 -2268 30 0 0 0 chr10 85325035 85325065 -54991700 + AT_rich Low_complexity Low_complexity 1 30 0 17012 131 9 1 chr10 85325161 85328658 -54988107 - L1PA8A LINE L1 -2 6129 2611 7224 177 14 42 chr10 85328659 85330258 -54986507 - L1PA8A LINE L1 -3630 2516 961 183 100 0 0 chr10 85330258 85330288 -54986477 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7224 177 14 42 chr10 85330288 85330308 -54986457 - L1PA8A LINE L1 -5185 961 942 * 16119 31 1 0 chr10 85330302 85332248 -54984517 - L1P LINE L1 -1161 4985 3039 2224 123 0 0 chr10 85332352 85332654 -54984111 - AluSx SINE Alu -10 302 1 2283 96 3 3 chr10 85332693 85332995 -54983770 - AluSx SINE Alu -10 302 1 7952 42 1 0 chr10 85332996 85334077 -54982688 - L1P2 LINE L1 -665 5489 4408 595 165 0 19 chr10 85334085 85334188 -54982577 - FRAM SINE Alu -13 163 63 879 183 21 5 chr10 85334188 85334374 -54982391 + MER5A DNA MER1_type 1 189 0 589 227 0 8 chr10 85385397 85385525 -54931240 + FLAM_A SINE Alu 1 127 -15 281 274 14 0 chr10 85385869 85385942 -54930823 - MIR3 SINE MIR -40 168 95 811 194 18 18 chr10 85386468 85386633 -54930132 - FRAM SINE Alu -16 160 1 30 45 0 0 chr10 85386778 85386822 -54929943 + AT_rich Low_complexity Low_complexity 1 44 0 2098 91 9 69 chr10 85387119 85387438 -54929327 - AluSp SINE Alu -11 302 3 2259 102 0 0 chr10 85387469 85387763 -54929002 + AluSx SINE Alu 1 294 -18 1477 224 52 31 chr10 85388875 85389161 -54927604 - MSTD LTR MaLR 0 396 98 2164 117 3 7 chr10 85389161 85389461 -54927304 - AluSq SINE Alu -14 299 1 1477 224 52 31 chr10 85389461 85389562 -54927203 - MSTD LTR MaLR -298 98 1 294 304 87 36 chr10 85391356 85391494 -54925271 + MLT1K LTR MaLR 159 303 -285 266 250 11 22 chr10 85391691 85391783 -54924982 + CT-rich Low_complexity Low_complexity 2 92 0 261 424 13 0 chr10 85393416 85393567 -54923198 + MIR3 SINE MIR 49 201 -7 21 36 0 0 chr10 85393958 85393986 -54922779 + AT_rich Low_complexity Low_complexity 1 28 0 3135 218 44 30 chr10 85394661 85395481 -54921284 - L1MB4 LINE L1 -6 6174 5344 321 280 49 72 chr10 85395568 85395832 -54920933 - MIR SINE MIR -4 258 1 219 139 0 0 chr10 85395906 85395942 -54920823 + (CA)n Simple_repeat Simple_repeat 1 36 0 1177 268 100 39 chr10 85396107 85396596 -54920169 + LTR40a LTR ERVL 1 519 0 253 276 155 17 chr10 85396600 85396716 -54920049 - MIR SINE MIR -8 254 123 3144 180 24 73 chr10 85397775 85398554 -54918211 + L1PB3 LINE L1 5401 6141 -13 417 198 0 12 chr10 85398744 85398825 -54917940 + MLT1J LTR MaLR 378 457 -54 2176 110 13 3 chr10 85399718 85400019 -54916746 + AluSc SINE Alu 1 304 -5 1558 173 99 185 chr10 85400472 85400893 -54915872 - L1MD3 LINE L1 -451 5649 5835 252 0 0 0 chr10 85400893 85400921 -54915844 + (CA)n Simple_repeat Simple_repeat 2 29 0 1558 173 99 185 chr10 85400921 85401498 -54915267 - L1MD3 LINE L1 -264 5836 5211 264 237 17 0 chr10 85401510 85401569 -54915196 - LTR40b LTR ERVL -1 461 402 315 71 0 0 chr10 85401569 85401611 -54915154 + (CA)n Simple_repeat Simple_repeat 1 42 0 209 182 0 68 chr10 85401613 85401701 -54915064 + (TA)n Simple_repeat Simple_repeat 2 83 0 233 196 0 0 chr10 85401701 85401747 -54915018 - L1MC/D LINE L1 -646 5713 5668 315 110 0 60 chr10 85401768 85401868 -54914897 + (TA)n Simple_repeat Simple_repeat 1 94 0 229 174 22 0 chr10 85402066 85402112 -54914653 - LTR40a LTR ERVL -377 142 96 1624 214 79 62 chr10 85402184 85402286 -54914479 - L1MD3 LINE L1 -875 5205 5106 2361 83 0 7 chr10 85402286 85402588 -54914177 - AluY SINE Alu -11 300 1 1624 214 79 62 chr10 85402588 85403206 -54913559 - L1MD3 LINE L1 -974 5106 4473 1143 211 34 75 chr10 85403212 85403506 -54913259 + AluJo SINE Alu 1 282 -30 30 0 0 0 chr10 85403506 85403536 -54913229 + AT_rich Low_complexity Low_complexity 1 30 0 3741 266 82 28 chr10 85403543 85405539 -54911226 - L1MD3 LINE L1 -1601 4479 2376 270 232 37 0 chr10 85405527 85405609 -54911156 + L1MC4 LINE L1 6617 6701 -1341 * 366 129 0 0 chr10 85405617 85405679 -54911086 + (TA)n Simple_repeat Simple_repeat 2 63 0 981 284 54 38 chr10 85405679 85406783 -54909982 - L1MD3 LINE L1 -3692 2388 1316 228 263 70 76 chr10 85406850 85407021 -54909744 - L1MD3 LINE L1 -5447 636 467 318 279 123 28 chr10 85407122 85407301 -54909464 - L1MD3 LINE L1 -5621 449 254 23 0 0 0 chr10 85407497 85407520 -54909245 + AT_rich Low_complexity Low_complexity 1 23 0 258 230 66 53 chr10 85408063 85408215 -54908550 + HAL1b LINE L1 640 793 -555 204 307 13 0 chr10 85408294 85408369 -54908396 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 2209 114 0 3 chr10 85410032 85410330 -54906435 - AluSx SINE Alu -15 297 1 1151 180 13 25 chr10 85410586 85410825 -54905940 - MER46A DNA MER2_type 0 236 1 187 253 126 53 chr10 85411042 85411137 -54905628 - MIR SINE MIR -121 141 40 216 167 0 0 chr10 85412188 85412236 -54904529 + (TAG)n Simple_repeat Simple_repeat 1 48 0 399 252 39 31 chr10 85412508 85412635 -54904130 + L2 LINE L2 3185 3312 -1 257 328 92 29 chr10 85412874 85413048 -54903717 - MIR SINE MIR 0 262 78 387 0 0 0 chr10 85413059 85413102 -54903663 + (TG)n Simple_repeat Simple_repeat 2 44 0 475 355 37 12 chr10 85413223 85413468 -54903297 - MIR SINE MIR -2 260 10 1502 299 174 13 chr10 85413502 85414457 -54902308 - L2 LINE L2 -45 3268 2150 727 362 91 42 chr10 85414621 85415428 -54901337 - L3 LINE CR1 -473 1104 259 1854 175 3 3 chr10 85415484 85415792 -54900973 + AluJo SINE Alu 1 308 -4 720 245 96 19 chr10 85416679 85416887 -54899878 - MIR SINE MIR -30 232 9 1458 204 31 3 chr10 85417045 85417369 -54899396 + L1MD3 LINE L1 7663 7995 0 1679 212 31 0 chr10 85417508 85417862 -54898903 - L1MB8 LINE L1 -176 6002 5638 227 273 290 16 chr10 85421397 85421580 -54895185 + MIR SINE MIR 30 262 0 811 167 29 61 chr10 85422539 85422784 -54893981 - L1MA7 LINE L1 0 6291 6055 452 349 36 16 chr10 85422928 85423120 -54893645 - MIR SINE MIR -54 208 13 1682 165 30 8 chr10 85425155 85425451 -54891314 - AluJo SINE Alu 0 312 11 621 211 60 24 chr10 85425535 85425701 -54891064 + MIR SINE MIR 74 245 -17 358 257 55 9 chr10 85427266 85427375 -54889390 - MER5B DNA MER1_type -1 177 64 247 266 0 0 chr10 85427776 85427840 -54888925 + MIR SINE MIR 88 151 -111 1926 81 32 7 chr10 85427985 85428268 -54888497 + L1PA8 LINE L1 5881 6170 -2 198 71 0 0 chr10 85428773 85428801 -54887964 + (TG)n Simple_repeat Simple_repeat 2 29 0 334 337 56 31 chr10 85429097 85429293 -54887472 + L2 LINE L2 2208 2408 -906 379 241 36 9 chr10 85429518 85429630 -54887135 + MER94 DNA DNA 4 118 -16 26 64 0 0 chr10 85429774 85429821 -54886944 + AT_rich Low_complexity Low_complexity 1 47 0 199 297 10 50 chr10 85430189 85430290 -54886475 + MIR SINE MIR 104 200 -62 405 335 57 11 chr10 85431468 85431644 -54885121 - MIR3 SINE MIR -9 199 16 2098 105 3 3 chr10 85432451 85432736 -54884029 - AluSx SINE Alu -25 287 3 2418 108 5 70 chr10 85432935 85433118 -54883647 - L1MA3 LINE L1 -1 7723 7530 1808 128 60 0 chr10 85433118 85433383 -54883382 - AluSx SINE Alu -28 284 4 2418 108 5 70 chr10 85433383 85433643 -54883122 - L1MA3 LINE L1 -194 7530 7309 11297 162 35 7 chr10 85433721 85433757 -54883008 - L1MA3 LINE L1 -512 7212 7178 1583 45 0 20 chr10 85433757 85433959 -54882806 - L1PA5 LINE L1 -8 6146 5949 11297 162 35 7 chr10 85433959 85435972 -54880793 - L1MA3 LINE L1 -546 7178 5058 906 5 0 81 chr10 85435972 85436158 -54880607 + (TA)n Simple_repeat Simple_repeat 2 172 0 11297 162 35 7 chr10 85436158 85436855 -54879910 - L1MA3 LINE L1 -2666 5058 4382 6247 93 11 1 chr10 85436874 85438383 -54878382 - L1PA14 LINE L1 -9 6152 4639 43 47 0 0 chr10 85438385 85438449 -54878316 + AT_rich Low_complexity Low_complexity 1 64 0 2108 114 13 10 chr10 85438450 85438748 -54878017 + AluSx SINE Alu 1 299 -13 8548 170 47 29 chr10 85438775 85440756 -54876009 - L1MA3 LINE L1 -4741 2824 14 189 333 0 15 chr10 85441332 85441398 -54875367 - L2 LINE L2 -11 3302 3238 1960 184 35 27 chr10 85442119 85442670 -54874095 - MLT2A2 LTR ERVL 0 554 1 874 209 12 0 chr10 85444199 85444362 -54872403 + FRAM SINE Alu 1 165 -1 264 224 0 0 chr10 85444580 85444647 -54872118 + (TA)n Simple_repeat Simple_repeat 1 67 0 1621 139 56 56 chr10 85446380 85446682 -54870083 - AluJo SINE Alu -10 302 1 1979 179 0 0 chr10 85447361 85447673 -54869092 + AluJb SINE Alu 1 312 0 390 292 60 60 chr10 85448282 85448515 -54868250 + MIR SINE MIR 9 241 -21 389 242 200 0 chr10 85450804 85450924 -54865841 - MIR SINE MIR -70 192 49 861 99 8 0 chr10 85451833 85451954 -54864811 + FLAM_C SINE Alu 4 125 -8 559 256 105 6 chr10 85452170 85452342 -54864423 - MER5A DNA MER1_type 0 189 1 187 283 10 61 chr10 85452395 85452494 -54864271 - L3b LINE CR1 -356 1227 1134 264 30 0 0 chr10 85452664 85452697 -54864068 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 22 35 0 0 chr10 85452713 85452742 -54864023 + AT_rich Low_complexity Low_complexity 1 29 0 222 136 0 0 chr10 85454141 85454185 -54862580 + (A)n Simple_repeat Simple_repeat 1 44 0 472 340 68 13 chr10 85455401 85455636 -54861129 + MIR SINE MIR 7 254 -8 1054 225 14 0 chr10 85455640 85455858 -54860907 - MER58A DNA MER1_type 0 224 4 345 267 19 29 chr10 85456014 85456119 -54860646 - MIR SINE MIR -86 122 19 224 321 68 37 chr10 85456154 85456332 -54860433 + MIR SINE MIR 33 216 -46 221 250 0 0 chr10 85456356 85456400 -54860365 + polypyrimidine Low_complexity Low_complexity 1 44 0 414 155 31 10 chr10 85456410 85456507 -54860258 + CT-rich Low_complexity Low_complexity 4 102 0 6079 169 32 15 chr10 85456515 85457013 -54859752 - L1MA7 LINE L1 0 6291 5803 297 0 0 0 chr10 85457013 85457046 -54859719 + (TG)n Simple_repeat Simple_repeat 2 34 0 6079 169 32 15 chr10 85457046 85458638 -54858127 - L1MA7 LINE L1 -488 5803 4161 23 0 0 0 chr10 85459321 85459344 -54857421 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 85459582 85459605 -54857160 + AT_rich Low_complexity Low_complexity 1 23 0 230 352 37 9 chr10 85459897 85460005 -54856760 + MIR SINE MIR 31 141 -121 206 283 0 0 chr10 85462009 85462069 -54854696 + (TG)n Simple_repeat Simple_repeat 2 61 0 221 349 83 80 chr10 85462902 85463338 -54853427 + L2 LINE L2 2826 3262 -10 196 247 14 41 chr10 85463561 85463634 -54853131 - L2 LINE L2 -211 3061 2991 370 122 0 0 chr10 85464098 85464180 -54852585 - AluS SINE Alu 0 314 233 491 311 91 29 chr10 85464625 85464866 -54851899 - L2 LINE L2 -865 2449 2194 191 280 0 0 chr10 85465149 85465199 -54851566 - MIR SINE MIR -61 147 98 411 298 108 57 chr10 85467270 85467530 -54849235 - L2 LINE L2 -353 2961 2716 2080 122 14 0 chr10 85467530 85467824 -54848941 - AluSx SINE Alu -13 299 2 2077 102 14 50 chr10 85467828 85468192 -54848573 - L1MA4A LINE L1 -4 6299 5949 411 298 108 57 chr10 85468192 85468315 -54848450 - L2 LINE L2 -600 2714 2553 218 283 245 31 chr10 85468326 85468485 -54848280 - L2 LINE L2 -884 2430 2238 269 172 91 34 chr10 85468695 85468788 -54847977 - L1MC/D LINE L1 -321 5800 5712 21 36 0 0 chr10 85468868 85468896 -54847869 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 85469219 85469249 -54847516 + AT_rich Low_complexity Low_complexity 1 30 0 1665 252 66 69 chr10 85469530 85469640 -54847125 - L1MCa LINE L1 -4039 2387 2278 2266 80 14 0 chr10 85469640 85469927 -54846838 - AluSp SINE Alu -22 291 1 1665 252 66 69 chr10 85469927 85470243 -54846522 - L1MCa LINE L1 -4148 2278 1963 186 133 0 0 chr10 85470243 85470273 -54846492 + (TA)n Simple_repeat Simple_repeat 1 30 0 1665 252 66 69 chr10 85470273 85470703 -54846062 - L1MCa LINE L1 -4463 1963 1407 798 239 38 8 chr10 85470726 85470990 -54845775 - L1MCa LINE L1 -5512 1095 824 666 240 90 5 chr10 85471099 85471299 -54845466 + MER97c DNA MER1_type? 202 418 -672 1028 306 56 74 chr10 85471767 85472689 -54844076 - HAL1 LINE L1 -1589 918 13 35 0 0 0 chr10 85473099 85473134 -54843631 + AT_rich Low_complexity Low_complexity 1 35 0 383 252 244 8 chr10 85474125 85474256 -54842509 + MIR SINE MIR 47 208 -54 450 65 0 0 chr10 85474264 85474326 -54842439 + (TA)n Simple_repeat Simple_repeat 1 62 0 736 301 103 42 chr10 85475163 85475611 -54841154 - MLT1J LTR MaLR -12 499 25 366 23 0 0 chr10 85477281 85477324 -54839441 + (CA)n Simple_repeat Simple_repeat 2 44 0 269 360 47 0 chr10 85479278 85479364 -54837401 + L2 LINE L2 3122 3211 -61 297 336 43 0 chr10 85479476 85479592 -54837173 - MIR SINE MIR -56 206 86 305 271 98 8 chr10 85479679 85479801 -54836964 + MER103 DNA DNA 21 153 -13 363 23 0 0 chr10 85480497 85480541 -54836224 + (CA)n Simple_repeat Simple_repeat 2 45 0 413 253 195 11 chr10 85480595 85480769 -54835996 + MIR SINE MIR 53 258 -4 22 0 0 0 chr10 85480991 85481013 -54835752 + AT_rich Low_complexity Low_complexity 1 22 0 888 219 10 10 chr10 85481206 85481398 -54835367 - AluJo SINE Alu -22 290 99 259 219 146 0 chr10 85481406 85481502 -54835263 + L1 LINE L1 3370 3479 -2667 624 170 0 0 chr10 85481511 85481611 -54835154 - AluJo SINE Alu -212 100 1 548 154 74 17 chr10 85481616 85481791 -54834974 - Charlie1 DNA MER1_type -47 2714 2530 11652 219 46 31 chr10 85481838 85487149 -54829616 - L1MB1 LINE L1 -1 6403 1029 21 0 0 0 chr10 85487219 85487240 -54829525 + AT_rich Low_complexity Low_complexity 1 21 0 989 192 106 0 chr10 85487260 85487458 -54829307 + MER20 DNA MER1_type 1 219 0 723 231 17 6 chr10 85487718 85487888 -54828877 + Charlie1a DNA MER1_type 1 187 -1268 280 200 0 50 chr10 85487931 85487991 -54828774 - MLT1J LTR MaLR -315 196 140 262 290 0 0 chr10 85490192 85490261 -54826504 - MIR3 SINE MIR -34 174 106 25 31 0 0 chr10 85490723 85490755 -54826010 + AT_rich Low_complexity Low_complexity 1 32 0 4043 149 19 4 chr10 85491510 85492375 -54824390 + L1MA1 LINE L1 4562 5444 -743 1107 123 24 9 chr10 85492369 85492580 -54824185 + L1MA1 LINE L1 5967 6180 -122 * 23 54 0 0 chr10 85492602 85492639 -54824126 + AT_rich Low_complexity Low_complexity 1 37 0 783 145 27 7 chr10 85492703 85492851 -54823914 - L1MA2 LINE L1 -135 6033 5887 1869 146 3 34 chr10 85492994 85493129 -54823636 + AluSx SINE Alu 1 139 -173 2056 114 0 0 chr10 85493129 85493402 -54823363 + AluSg SINE Alu 1 273 -37 185 0 40 0 chr10 85493409 85493434 -54823331 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1869 146 3 34 chr10 85493434 85493611 -54823154 + AluSx SINE Alu 145 311 -1 389 325 86 0 chr10 85493699 85493862 -54822903 + MIR SINE MIR 60 236 -26 209 266 12 0 chr10 85494240 85494295 -54822470 + MIR SINE MIR 64 122 -86 383 278 40 16 chr10 85494370 85494496 -54822269 - MLT1L LTR MaLR -102 513 385 908 117 50 100 chr10 85494891 85495131 -54821634 + L1MB4 LINE L1 5945 6172 -8 3167 133 90 19 chr10 85495941 85496518 -54820247 + L1MC1 LINE L1 5708 6325 -8 1985 89 107 0 chr10 85496518 85496799 -54819966 + AluSq SINE Alu 1 311 -2 2275 56 0 0 chr10 85497227 85497493 -54819272 + AluY SINE Alu 22 287 -24 30 0 0 0 chr10 85497714 85497744 -54819021 + AT_rich Low_complexity Low_complexity 1 30 0 2287 161 20 15 chr10 85498976 85499385 -54817380 - MSTB LTR MaLR -15 411 1 182 103 0 26 chr10 85500110 85500149 -54816616 + (CA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 85500220 85500241 -54816524 + AT_rich Low_complexity Low_complexity 1 21 0 308 299 143 20 chr10 85500489 85500733 -54816032 + L1MC4a LINE L1 5119 5392 -754 1423 179 0 27 chr10 85501019 85501276 -54815489 - AluJo SINE Alu -30 282 33 727 298 86 81 chr10 85501288 85502015 -54814750 + L2 LINE L2 2584 3313 0 345 285 62 65 chr10 85502027 85502318 -54814447 + L1MC4a LINE L1 5593 5882 -1926 1724 167 0 31 chr10 85502781 85503099 -54813666 + AluJo SINE Alu 1 308 -4 346 238 79 8 chr10 85503099 85503225 -54813540 - L1ME4a LINE L1 -13 6108 5974 305 289 11 0 chr10 85503567 85503657 -54813108 + L2 LINE L2 2451 2541 -773 1147 316 58 18 chr10 85503967 85504728 -54812037 + L2 LINE L2 2524 3313 0 259 325 112 5 chr10 85504796 85505002 -54811763 - L1ME4a LINE L1 -341 5780 5553 287 292 0 17 chr10 85505064 85505184 -54811581 - L1ME4a LINE L1 -688 5433 5316 21 36 0 0 chr10 85505327 85505355 -54811410 + AT_rich Low_complexity Low_complexity 1 28 0 363 281 141 27 chr10 85506265 85506450 -54810315 + MIR SINE MIR 32 237 -25 353 323 126 52 chr10 85506961 85507473 -54809292 + L2 LINE L2 2664 3270 -2 1727 117 8 0 chr10 85508208 85508448 -54808317 + AluSq SINE Alu 1 242 -71 221 355 86 35 chr10 85510018 85510215 -54806550 - L3 LINE CR1 -5 1572 1366 231 220 0 0 chr10 85510265 85510315 -54806450 - L2 LINE L2 -2 3311 3262 37 23 0 0 chr10 85511450 85511494 -54805271 + AT_rich Low_complexity Low_complexity 1 44 0 393 184 0 57 chr10 85512070 85512211 -54804554 + CT-rich Low_complexity Low_complexity 2 134 0 2256 114 3 0 chr10 85513226 85513532 -54803233 - AluSx SINE Alu -5 307 1 252 59 0 0 chr10 85513960 85513994 -54802771 + (TG)n Simple_repeat Simple_repeat 1 34 0 198 97 0 0 chr10 85513994 85514019 -54802746 + (GA)n Simple_repeat Simple_repeat 2 26 0 2003 107 0 7 chr10 85514480 85514775 -54801990 - AluSg SINE Alu 0 303 11 292 279 153 49 chr10 85515719 85515902 -54800863 - MIR SINE MIR 0 262 61 503 357 83 27 chr10 85516262 85516710 -54800055 + L2 LINE L2 2302 2774 -540 25 0 0 0 chr10 85517277 85517302 -54799463 + AT_rich Low_complexity Low_complexity 1 25 0 307 326 13 101 chr10 85517785 85518012 -54798753 + L1MEd LINE L1 78 284 -5835 605 303 86 41 chr10 85518138 85518894 -54797871 + L1MEd LINE L1 445 1234 -4885 380 309 72 19 chr10 85518905 85519167 -54797598 + L1MEd LINE L1 1313 1588 -4722 1848 300 181 41 chr10 85519245 85520349 -54796416 + L2 LINE L2 622 1911 -1403 2259 97 7 3 chr10 85520349 85520659 -54796106 - AluY SINE Alu 0 311 1 1848 300 181 41 chr10 85520659 85520762 -54796003 + L2 LINE L2 1911 1998 -1316 264 83 0 42 chr10 85520762 85520810 -54795955 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 1204 186 25 61 chr10 85520810 85521090 -54795675 - AluJo SINE Alu 0 360 43 2396 276 134 23 chr10 85521090 85522232 -54794533 + L2 LINE L2 1984 3251 -62 351 302 88 103 chr10 85522283 85522670 -54794095 + MLT1J1 LTR MaLR 66 446 0 298 261 6 36 chr10 85522710 85522875 -54793890 + (TAAA)n Simple_repeat Simple_repeat 1 160 0 276 230 106 80 chr10 85524493 85524606 -54792159 - MIR3 SINE MIR -87 121 6 285 186 0 0 chr10 85525389 85525459 -54791306 + (TCCA)n Simple_repeat Simple_repeat 2 71 0 541 83 0 0 chr10 85525519 85525591 -54791174 - MADE1 DNA Mariner -7 73 2 14811 33 2 1 chr10 85526773 85528608 -54788157 - L1PA3 LINE L1 -2675 3471 1635 15971 33 11 0 chr10 85528608 85531277 -54785488 + L1PA3 LINE L1 3474 6152 -3 4525 171 16 28 chr10 85531296 85532133 -54784632 + MER6 DNA MER2_type 39 865 0 30 59 0 0 chr10 85533617 85533668 -54783097 + AT_rich Low_complexity Low_complexity 1 51 0 356 240 68 123 chr10 85533825 85533971 -54782794 + MIR3 SINE MIR 32 169 -39 236 191 32 0 chr10 85534076 85534139 -54782626 + GA-rich Low_complexity Low_complexity 3 67 0 269 289 44 35 chr10 85535095 85535209 -54781556 + MIR SINE MIR 7 121 -141 322 219 10 52 chr10 85535443 85535539 -54781226 + L1MC4 LINE L1 6614 6705 -1337 221 324 67 19 chr10 85535772 85535877 -54780888 + MIR SINE MIR 11 120 -142 294 349 53 14 chr10 85537334 85537543 -54779222 + MIR SINE MIR 46 262 0 196 291 17 94 chr10 85538053 85538170 -54778595 - MIR SINE MIR -75 187 80 804 133 36 30 chr10 85539099 85539265 -54777500 + L1MB1 LINE L1 6002 6168 0 495 300 100 11 chr10 85539326 85539516 -54777249 + MIR SINE MIR 21 227 -35 181 255 75 38 chr10 85540982 85541088 -54775677 - L2 LINE L2 -40 3273 3164 538 324 31 8 chr10 85541231 85541452 -54775313 - MIR SINE MIR -36 226 3 1561 187 75 12 chr10 85542524 85542925 -54773840 + LTR37A LTR ERV1 1 426 0 180 0 0 0 chr10 85543444 85543464 -54773301 + (CAA)n Simple_repeat Simple_repeat 2 21 0 348 307 68 16 chr10 85546422 85546614 -54770151 - MIR SINE MIR -1 261 60 2179 122 0 0 chr10 85546631 85546927 -54769838 - AluSx SINE Alu -14 298 3 183 231 0 0 chr10 85547317 85547356 -54769409 - L2 LINE L2 -3 3269 3231 216 0 0 0 chr10 85547554 85547578 -54769187 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 276 100 0 0 chr10 85549148 85549188 -54767577 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 29 0 0 0 chr10 85549525 85549554 -54767211 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr10 85550000 85550020 -54766745 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 469 314 48 30 chr10 85550062 85550396 -54766369 + L1ME LINE L1 5338 5677 -444 24 32 0 0 chr10 85550407 85550438 -54766327 + AT_rich Low_complexity Low_complexity 1 31 0 29 47 0 0 chr10 85550601 85550644 -54766121 + AT_rich Low_complexity Low_complexity 1 43 0 274 289 89 50 chr10 85551061 85551241 -54765524 - MIR3 SINE MIR -8 200 14 627 152 0 51 chr10 85551322 85551460 -54765305 - MER33 DNA MER1_type 0 363 233 6122 181 26 5 chr10 85551469 85552770 -54763995 + L1 LINE L1 3104 4431 -1715 916 133 28 11 chr10 85552770 85552942 -54763823 + L1MA4 LINE L1 6109 6292 -8 706 206 44 25 chr10 85552945 85553185 -54763580 - MER33 DNA MER1_type -91 233 1 447 19 0 0 chr10 85554020 85554072 -54762693 + (CA)n Simple_repeat Simple_repeat 2 53 0 196 256 0 0 chr10 85555183 85555226 -54761539 + MIR SINE MIR 85 127 -81 185 355 0 0 chr10 85555438 85555500 -54761265 + L2 LINE L2 3243 3304 -9 19153 42 0 4 chr10 85555766 85558921 -54757844 + L1PA5 LINE L1 3000 6154 0 492 279 71 11 chr10 85559900 85560083 -54756682 - MIR SINE MIR 0 262 69 1555 127 163 36 chr10 85560111 85560442 -54756323 - THE1C LTR MaLR 0 375 3 268 235 0 15 chr10 85561293 85561361 -54755404 + MIR SINE MIR 165 231 -31 384 313 46 41 chr10 85561472 85561667 -54755098 + MIR SINE MIR 60 255 -7 2238 130 31 6 chr10 85562448 85562803 -54753962 + THE1B LTR MaLR 1 364 0 10958 112 1 28 chr10 85562804 85564427 -54752338 + THE1B-int LTR MaLR 2 1580 0 1972 144 40 8 chr10 85564427 85564780 -54751985 + THE1B LTR MaLR 1 364 0 272 290 33 0 chr10 85565596 85565704 -54751061 + MIR SINE MIR 77 188 -62 321 378 26 26 chr10 85567701 85567852 -54748913 + L2 LINE L2 3117 3267 -5 2342 88 3 7 chr10 85568348 85568656 -54748109 + AluSc SINE Alu 1 307 -2 385 278 70 47 chr10 85568777 85569737 -54747028 + L1MC/D LINE L1 4487 5484 -758 234 0 0 0 chr10 85569932 85569958 -54746807 + (CA)n Simple_repeat Simple_repeat 1 26 0 314 194 54 116 chr10 85570719 85570848 -54745917 + MIR SINE MIR 68 188 -74 1860 200 26 26 chr10 85570877 85571262 -54745503 - MLT1B LTR MaLR 0 390 6 383 258 32 0 chr10 85571434 85571527 -54745238 + L2 LINE L2 1581 1676 -1638 254 279 15 0 chr10 85571539 85571607 -54745158 + MER112 DNA MER1_type 4 72 -188 423 0 0 0 chr10 85571820 85571867 -54744898 + (TG)n Simple_repeat Simple_repeat 2 48 0 573 161 0 0 chr10 85571891 85571984 -54744781 - FLAM_A SINE Alu -49 93 1 1172 310 134 28 chr10 85571994 85572938 -54743827 + L2 LINE L2 1691 2735 -579 184 156 178 0 chr10 85572960 85573005 -54743760 + L2 LINE L2 3219 3271 -1 23 0 0 0 chr10 85573385 85573408 -54743357 + AT_rich Low_complexity Low_complexity 1 23 0 2064 157 0 0 chr10 85574249 85574635 -54742130 - AluSx SINE Alu 0 386 1 352 306 40 23 chr10 85575174 85575347 -54741418 - L2 LINE L2 -681 2633 2458 248 282 55 64 chr10 85575497 85575607 -54741158 + MIR SINE MIR 79 187 -75 1648 137 56 0 chr10 85576755 85577004 -54739761 + AluSq SINE Alu 3 265 -48 317 284 52 26 chr10 85577161 85577316 -54739449 - MIR SINE MIR -4 258 100 374 286 70 29 chr10 85578129 85578300 -54738465 - MIR SINE MIR -15 247 70 326 287 30 10 chr10 85579103 85579204 -54737561 + CT-rich Low_complexity Low_complexity 6 108 0 244 0 56 0 chr10 85579972 85580008 -54736757 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 307 283 81 103 chr10 85580855 85581262 -54735503 + HAL1b LINE L1 169 566 -782 336 286 45 0 chr10 85581703 85581815 -54734950 + L1ME LINE L1 5523 5639 -482 1754 186 3 0 chr10 85582212 85582513 -54734252 + AluJo SINE Alu 3 304 -8 344 295 0 33 chr10 85582517 85582639 -54734126 + MIR3 SINE MIR 60 177 -31 256 260 106 0 chr10 85582872 85582976 -54733789 + MER103 DNA DNA 6 120 -46 35 54 0 0 chr10 85583625 85583681 -54733084 + AT_rich Low_complexity Low_complexity 1 56 0 225 231 51 39 chr10 85584474 85584552 -54732213 - MIR SINE MIR -20 242 164 294 354 10 0 chr10 85585623 85585722 -54731043 - MIR3 SINE MIR -5 203 104 458 307 109 29 chr10 85585763 85586183 -54730582 + L2 LINE L2 1578 2031 -1283 845 336 122 31 chr10 85586360 85587096 -54729669 + L2 LINE L2 2034 2836 -478 2119 93 10 33 chr10 85588471 85588773 -54727992 + AluSx SINE Alu 1 295 -17 1241 180 70 33 chr10 85588897 85589169 -54727596 + AluJo SINE Alu 24 305 -7 24 53 0 0 chr10 85589519 85589557 -54727208 + AT_rich Low_complexity Low_complexity 1 38 0 354 270 51 7 chr10 85589941 85590078 -54726687 + MER112 DNA MER1_type 83 225 -35 526 242 219 14 chr10 85590565 85590780 -54725985 + MIR SINE MIR 4 262 0 1763 225 67 19 chr10 85591580 85592060 -54724705 - MLT1D LTR MaLR -2 503 1 200 299 0 65 chr10 85592201 85592278 -54724487 + L3 LINE CR1 970 1041 -536 1592 175 77 57 chr10 85592992 85593358 -54723407 + MLT1B LTR MaLR 18 390 0 2369 231 11 18 chr10 85593358 85594035 -54722730 + MLT1B-int LTR MaLR 1 884 -487 348 256 100 0 chr10 85594119 85594209 -54722556 + MLT-int LTR MaLR 683 781 -954 1810 245 24 5 chr10 85594390 85594803 -54721962 + MLT1B-int LTR MaLR 1311 1731 -4 1549 205 29 44 chr10 85594814 85595199 -54721566 + MLT1B LTR MaLR 12 390 0 253 355 94 0 chr10 85595475 85595613 -54721152 - MIR SINE MIR -28 180 30 21 0 0 0 chr10 85596020 85596041 -54720724 + AT_rich Low_complexity Low_complexity 1 21 0 2580 62 0 0 chr10 85596643 85596947 -54719818 - AluSc SINE Alu -5 304 1 747 214 0 0 chr10 85597000 85597131 -54719634 + FLAM_C SINE Alu 1 131 -2 1782 133 25 12 chr10 85597642 85597966 -54718799 + L1MA5A LINE L1 5970 6297 0 263 239 9 124 chr10 85597993 85598106 -54718659 - MIR SINE MIR -54 208 109 200 355 50 43 chr10 85598460 85598601 -54718164 - L2 LINE L2 -3 3310 3169 273 308 0 0 chr10 85599410 85599475 -54717290 + L2 LINE L2 3203 3267 -5 1525 255 68 37 chr10 85599697 85600183 -54716582 - MLT1D LTR MaLR 0 505 5 777 259 17 35 chr10 85600198 85600430 -54716335 + LTR16C LTR ERVL 264 491 0 606 63 0 0 chr10 85600462 85600541 -54716224 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 1986 247 21 28 chr10 85600935 85601470 -54715295 + LTR31 LTR ERV1 74 604 -15 307 156 47 31 chr10 85601496 85601560 -54715205 - L1MEc LINE L1 -4890 1673 1609 5899 98 26 3 chr10 85601560 85602933 -54713832 + L1PA13 LINE L1 4766 6158 -5 226 111 0 44 chr10 85602945 85602990 -54713775 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 239 330 0 0 chr10 85602991 85603079 -54713686 - L1MEc LINE L1 -4929 1455 1368 2810 253 57 69 chr10 85603107 85604362 -54712403 - L1MEc LINE L1 -5121 1442 203 641 231 40 23 chr10 85604619 85604699 -54712066 + MER69A DNA AcHobo 2 79 -2447 2173 124 0 3 chr10 85604699 85604998 -54711767 - AluSq SINE Alu -15 298 1 641 231 40 23 chr10 85604998 85605090 -54711675 + MER69A DNA AcHobo 79 177 0 247 25 50 0 chr10 85605168 85605208 -54711557 + (CA)n Simple_repeat Simple_repeat 1 42 0 187 320 0 0 chr10 85605810 85605860 -54710905 - L2 LINE L2 -12 3301 3252 261 0 0 0 chr10 85606054 85606083 -54710682 + (CA)n Simple_repeat Simple_repeat 1 29 0 627 268 82 30 chr10 85607118 85607349 -54709416 - MER115 DNA AcHobo 0 693 451 244 220 0 0 chr10 85607706 85607756 -54709009 - MER115 DNA AcHobo -623 70 21 628 304 89 62 chr10 85608127 85608753 -54708012 + L1M4 LINE L1 2421 3063 -3083 21 36 0 0 chr10 85608804 85608832 -54707933 + AT_rich Low_complexity Low_complexity 1 28 0 811 133 0 8 chr10 85609257 85609377 -54707388 + FLAM_C SINE Alu 13 131 -12 232 143 57 14 chr10 85609510 85609580 -54707185 + (TA)n Simple_repeat Simple_repeat 2 74 0 387 298 118 35 chr10 85609583 85610410 -54706355 + L1M4 LINE L1 3758 4653 -1493 188 265 0 0 chr10 85610466 85610500 -54706265 + MIR SINE MIR 20 53 -209 23 33 0 0 chr10 85610815 85610845 -54705920 + AT_rich Low_complexity Low_complexity 1 30 0 415 314 113 39 chr10 85610954 85611396 -54705369 + L1ME4a LINE L1 5335 5809 -312 869 114 0 0 chr10 85611431 85611554 -54705211 - AluSg/x SINE Alu -1 311 189 267 266 65 39 chr10 85611621 85611775 -54704990 + L1ME4a LINE L1 5871 6028 -93 2876 0 0 0 chr10 85612423 85612730 -54704035 + AluYa5 SINE Alu 1 307 -4 658 248 177 71 chr10 85612738 85613275 -54703490 + MLT1G1 LTR MaLR 2 595 0 269 297 155 19 chr10 85613580 85613735 -54703030 - MIR SINE MIR -67 195 20 497 275 108 12 chr10 85613750 85613917 -54702848 - MER5A DNA MER1_type -4 185 3 239 309 34 54 chr10 85615273 85615422 -54701343 + MIR SINE MIR 55 200 -62 490 321 110 44 chr10 85615753 85616361 -54700404 + L1M4 LINE L1 4734 5381 -765 503 234 19 106 chr10 85616812 85616944 -54699821 - MER106A DNA MER1_type 0 236 135 1912 127 48 7 chr10 85616944 85617235 -54699530 - AluSx SINE Alu -9 303 1 503 234 19 106 chr10 85617235 85617358 -54699407 - MER106A DNA MER1_type -101 135 3 253 300 118 9 chr10 85617995 85618105 -54698660 - MIR SINE MIR -47 215 94 448 283 186 39 chr10 85618213 85618524 -54698241 - L2 LINE L2 -36 3277 2921 660 265 45 25 chr10 85618531 85618731 -54698034 - MLT1J2 LTR MaLR -2 448 245 1032 260 89 14 chr10 85618909 85619336 -54697429 - L2 LINE L2 -354 2918 2456 1314 241 60 29 chr10 85619433 85619848 -54696917 - MLT1G1 LTR MaLR -167 428 1 870 321 34 12 chr10 85619849 85620176 -54696589 - L2 LINE L2 -873 2441 2108 250 194 0 147 chr10 85620496 85620644 -54696121 + MLT2D LTR ERVL 229 366 -48 245 91 78 13 chr10 85620649 85620726 -54696039 + (TA)n Simple_repeat Simple_repeat 1 82 0 28 0 0 0 chr10 85621732 85621760 -54695005 + AT_rich Low_complexity Low_complexity 1 28 0 1143 194 73 45 chr10 85622961 85623249 -54693516 + AluJo SINE Alu 1 296 -6 225 259 17 0 chr10 85623396 85623454 -54693311 + CT-rich Low_complexity Low_complexity 6 64 0 201 121 0 0 chr10 85623454 85623487 -54693278 + (CA)n Simple_repeat Simple_repeat 1 33 0 4085 26 62 0 chr10 85623605 85624102 -54692663 - L1PA4 LINE L1 -4 6151 5624 353 273 60 47 chr10 85625321 85625471 -54691294 + MIR3 SINE MIR 3 154 -54 1425 281 59 18 chr10 85626541 85627053 -54689712 + MER77 LTR ERV1 67 599 -6 203 313 125 47 chr10 85627123 85627251 -54689514 - MIR3 SINE MIR -59 149 12 650 176 23 15 chr10 85627530 85627661 -54689104 + L1MC1 LINE L1 6188 6319 -14 1368 204 52 89 chr10 85628446 85628931 -54687834 + MLT1C LTR MaLR 1 467 0 189 121 0 0 chr10 85629217 85629250 -54687515 + (CA)n Simple_repeat Simple_repeat 2 34 0 2506 150 10 74 chr10 85629439 85629552 -54687213 - MLT1C LTR MaLR 0 467 348 2065 122 0 0 chr10 85629552 85629831 -54686934 + AluSx SINE Alu 14 292 -20 2506 150 10 74 chr10 85629831 85630216 -54686549 - MLT1C LTR MaLR -119 348 1 241 149 46 35 chr10 85630512 85630599 -54686166 + GA-rich Low_complexity Low_complexity 3 90 0 1463 195 27 0 chr10 85632493 85632749 -54684016 - AluJo SINE Alu -48 264 2 259 283 88 0 chr10 85635052 85635165 -54681600 + MLT1J LTR MaLR 20 142 -369 1192 200 11 57 chr10 85635238 85635503 -54681262 + AluJo SINE Alu 44 296 -16 9921 202 51 18 chr10 85635521 85637214 -54679551 + L1MB2 LINE L1 2581 4215 -1956 207 0 0 0 chr10 85637214 85637237 -54679528 + (CA)n Simple_repeat Simple_repeat 1 23 0 9921 202 51 18 chr10 85637237 85639014 -54677751 + L1MB2 LINE L1 4215 6164 -7 274 319 30 15 chr10 85639066 85639201 -54677564 + MLT1J LTR MaLR 245 381 -130 279 277 153 85 chr10 85639836 85639930 -54676835 - L2 LINE L2 -47 3266 3180 441 0 0 0 chr10 85639930 85639979 -54676786 + (TG)n Simple_repeat Simple_repeat 2 50 0 279 277 153 85 chr10 85639979 85640191 -54676574 - L2 LINE L2 -133 3180 2939 207 0 0 0 chr10 85640264 85640287 -54676478 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 85641808 85641830 -54674935 + AT_rich Low_complexity Low_complexity 1 22 0 952 48 0 16 chr10 85642285 85642434 -54674331 + L1PA4 LINE L1 6016 6162 0 272 292 117 25 chr10 85642435 85642555 -54674210 + MIR SINE MIR 56 186 -76 2361 100 0 6 chr10 85642718 85643029 -54673736 - AluSg1 SINE Alu 0 309 1 837 190 123 5 chr10 85643412 85643607 -54673158 + MSTA LTR MaLR 1 218 -210 361 76 30 0 chr10 85643608 85643674 -54673091 + (TC)n Simple_repeat Simple_repeat 2 69 0 1134 177 9 22 chr10 85643674 85643906 -54672859 + MSTA LTR MaLR 200 428 0 529 289 40 61 chr10 85644478 85644755 -54672010 + MER21B LTR ERV1 24 294 -569 201 154 0 0 chr10 85645306 85645345 -54671420 + T-rich Low_complexity Low_complexity 1 39 0 301 247 112 37 chr10 85645377 85645563 -54671202 + MER21B LTR ERV1 379 659 -272 333 287 85 11 chr10 85646000 85646094 -54670671 + MER5B DNA MER1_type 4 104 -74 1538 177 21 21 chr10 85646737 85647020 -54669745 + AluJo SINE Alu 9 291 -21 225 254 0 0 chr10 85647151 85647210 -54669555 - L1MC/D LINE L1 -2037 5771 5713 228 281 31 52 chr10 85647529 85647625 -54669140 + MER5B DNA MER1_type 85 178 0 21 0 0 0 chr10 85647861 85647882 -54668883 + AT_rich Low_complexity Low_complexity 1 21 0 1466 142 12 4 chr10 85647902 85648148 -54668617 - MER4D LTR ERV1 -655 248 1 362 171 188 17 chr10 85648156 85648273 -54668492 + L1MC2 LINE L1 6207 6343 -1 348 300 80 13 chr10 85648888 85649038 -54667727 - MIR SINE MIR -36 226 67 29 47 0 0 chr10 85649314 85649357 -54667408 + AT_rich Low_complexity Low_complexity 1 43 0 1916 138 7 14 chr10 85649435 85649748 -54667017 + AluSq SINE Alu 1 311 0 2183 28 0 0 chr10 85652351 85652603 -54664162 + AluY SINE Alu 1 252 -59 1522 156 36 20 chr10 85653259 85653561 -54663204 + L1PB4 LINE L1 5822 6128 -28 575 311 106 45 chr10 85654474 85654679 -54662086 + L1ME4a LINE L1 5255 5446 -675 213 39 0 0 chr10 85654679 85654705 -54662060 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 575 311 106 45 chr10 85654705 85655284 -54661481 + L1ME4a LINE L1 5446 6094 -27 189 0 0 0 chr10 85656326 85656347 -54660418 + (ATG)n Simple_repeat Simple_repeat 3 23 0 363 44 0 0 chr10 85656836 85656881 -54659884 + (TG)n Simple_repeat Simple_repeat 2 46 0 188 234 0 16 chr10 85658366 85658430 -54658335 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 357 329 21 28 chr10 85658848 85658991 -54657774 + MIR SINE MIR 48 189 -73 1090 183 112 18 chr10 85659646 85659931 -54656834 + MER33 DNA MER1_type 1 312 -12 1933 167 10 6 chr10 85661068 85661259 -54655506 - AluJo SINE Alu 0 312 118 243 0 0 0 chr10 85661259 85661286 -54655479 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1933 167 10 6 chr10 85661286 85661405 -54655360 - AluJo SINE Alu -194 118 1 27 0 0 0 chr10 85661632 85661659 -54655106 + AT_rich Low_complexity Low_complexity 1 27 0 2351 102 0 0 chr10 85662132 85662437 -54654328 + AluSx SINE Alu 1 305 -7 236 371 35 0 chr10 85662726 85662869 -54653896 - MIR SINE MIR -33 229 82 235 358 92 12 chr10 85662974 85663226 -54653539 + L2 LINE L2 2791 3058 -255 1707 181 0 7 chr10 85663334 85663615 -54653150 + AluJo SINE Alu 1 279 -33 180 0 0 0 chr10 85663616 85663636 -54653129 + (CAT)n Simple_repeat Simple_repeat 2 21 0 212 271 0 0 chr10 85663708 85663767 -54652998 + A-rich Low_complexity Low_complexity 1 59 0 234 0 0 0 chr10 85664226 85664252 -54652513 + (A)n Simple_repeat Simple_repeat 1 26 0 1478 199 51 14 chr10 85664899 85665015 -54651750 + AluJo SINE Alu 1 111 -201 189 0 0 0 chr10 85665015 85665036 -54651729 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 1478 199 51 14 chr10 85665036 85665215 -54651550 + AluJo SINE Alu 111 307 -5 185 183 28 49 chr10 85666367 85666457 -54650308 + (CACCAT)n Simple_repeat Simple_repeat 4 91 -51 1658 229 46 20 chr10 85666457 85666912 -54649853 + MLT1C LTR MaLR 1 467 0 185 183 28 49 chr10 85666912 85666963 -54649802 + (CACCAT)n Simple_repeat Simple_repeat 91 142 0 294 413 7 0 chr10 85667230 85667368 -54649397 - MIR3 SINE MIR -33 175 37 852 316 140 22 chr10 85668783 85669455 -54647310 + L2 LINE L2 2313 3074 -239 234 0 0 0 chr10 85669621 85669647 -54647118 + (ATG)n Simple_repeat Simple_repeat 2 27 0 241 227 74 147 chr10 85669656 85669819 -54646946 - MIR SINE MIR 0 262 112 236 349 46 28 chr10 85670644 85670753 -54646012 + L3 LINE CR1 280 390 -1187 522 227 84 13 chr10 85670905 85671059 -54645706 - MIR SINE MIR -14 248 84 436 352 128 18 chr10 85671107 85671505 -54645260 + L3 LINE CR1 1129 1570 -7 2129 147 0 0 chr10 85671546 85671858 -54644907 + AluSq SINE Alu 1 312 -1 207 0 0 0 chr10 85671858 85671881 -54644884 + (TA)n Simple_repeat Simple_repeat 1 23 0 301 301 92 43 chr10 85672802 85672965 -54643800 + MIR SINE MIR 87 257 -5 1175 199 36 58 chr10 85673165 85673527 -54643238 - MLT1A1 LTR MaLR 0 365 12 195 100 0 0 chr10 85673876 85673906 -54642859 + (CA)n Simple_repeat Simple_repeat 2 31 0 1663 199 7 10 chr10 85674165 85674471 -54642294 - AluJo SINE Alu -7 305 1 1801 109 109 7 chr10 85675608 85675892 -54640873 + AluSq SINE Alu 1 313 0 295 291 85 60 chr10 85676145 85676427 -54640338 - MLT1L LTR MaLR -201 414 126 220 265 0 0 chr10 85676642 85676691 -54640074 - MIR SINE MIR -66 196 148 297 241 0 46 chr10 85676858 85676966 -54639799 - L1ME4a LINE L1 -58 6063 5961 386 223 31 124 chr10 85677767 85677960 -54638805 - MER5B DNA MER1_type 0 178 4 629 333 153 25 chr10 85678150 85679056 -54637709 + L2 LINE L2 2283 3311 -2 441 165 38 0 chr10 85681252 85681331 -54635434 + MLT1B LTR MaLR 1 82 -308 839 151 5 107 chr10 85681367 85681500 -54635265 + MLT1B LTR MaLR 205 311 -79 1992 145 44 0 chr10 85681500 85681797 -54634968 - AluSx SINE Alu -2 310 1 839 151 5 107 chr10 85681797 85681868 -54634897 + MLT1B LTR MaLR 311 388 -2 274 289 69 13 chr10 85682638 85682797 -54633968 + L1ME4a LINE L1 5950 6117 -4 2082 131 12 0 chr10 85682884 85683228 -54633537 - L1MA2 LINE L1 0 6304 5957 206 206 15 0 chr10 85683533 85683601 -54633164 + (TA)n Simple_repeat Simple_repeat 1 69 0 280 261 88 53 chr10 85684000 85684157 -54632608 - MIR3 SINE MIR -33 175 13 22 0 0 0 chr10 85685498 85685520 -54631245 + AT_rich Low_complexity Low_complexity 1 22 0 717 225 147 35 chr10 85687875 85688133 -54628632 - L1ME3A LINE L1 -26 6144 5858 22198 47 44 2 chr10 85688446 85691412 -54625353 - L1P LINE L1 -3056 3090 1 306 328 26 26 chr10 85691466 85691658 -54625107 - L1M4 LINE L1 -2983 3163 2972 23 33 0 0 chr10 85692344 85692374 -54624391 + AT_rich Low_complexity Low_complexity 1 30 0 2008 129 0 7 chr10 85692399 85692677 -54624088 - AluSx SINE Alu -36 276 1 2289 115 0 3 chr10 85693218 85693531 -54623234 - AluSx SINE Alu 0 312 1 475 313 13 13 chr10 85695693 85695843 -54620922 + MER5B DNA MER1_type 28 177 -1 2224 208 105 53 chr10 85696225 85696922 -54619843 + MER44D DNA MER2_type 1 605 0 315 297 94 23 chr10 85697795 85697923 -54618842 - MIR3 SINE MIR -46 162 26 2343 108 0 0 chr10 85698258 85698565 -54618200 - AluSx SINE Alu -5 307 1 263 239 0 0 chr10 85699157 85699203 -54617562 - MIR3 SINE MIR -48 160 115 1921 225 52 33 chr10 85699273 85699793 -54616972 + MER77 LTR ERV1 56 585 -20 1156 246 40 9 chr10 85700351 85700672 -54616093 + LTR53 LTR ERVL 189 519 0 183 80 0 0 chr10 85700914 85700939 -54615826 + (T)n Simple_repeat Simple_repeat 1 25 0 3886 196 52 18 chr10 85701246 85702074 -54614691 - MER21B LTR ERV1 -1 862 7 4406 144 66 29 chr10 85702197 85703623 -54613142 + pTR5 LTR ERV1 724 2606 0 1152 194 106 3 chr10 85703662 85703982 -54612783 - L1MA7 LINE L1 0 6291 5939 215 235 111 25 chr10 85704048 85704129 -54612636 + MIR SINE MIR 66 153 -109 32 75 0 0 chr10 85705762 85705829 -54610936 + AT_rich Low_complexity Low_complexity 1 67 0 22 80 0 0 chr10 85706021 85706071 -54610694 + AT_rich Low_complexity Low_complexity 1 50 0 234 344 148 16 chr10 85706883 85707133 -54609632 + L2 LINE L2 2560 2842 -472 1981 103 4 0 chr10 85707423 85707686 -54609079 - AluSp SINE Alu -12 301 38 218 180 20 20 chr10 85707809 85707859 -54608906 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 278 271 12 47 chr10 85709241 85709326 -54607439 + L2 LINE L2 3191 3272 0 21 36 0 0 chr10 85709952 85709980 -54606785 + AT_rich Low_complexity Low_complexity 1 28 0 286 256 70 23 chr10 85710334 85710463 -54606302 + LTR16C LTR ERVL 357 491 0 22 0 0 0 chr10 85711499 85711521 -54605244 + AT_rich Low_complexity Low_complexity 1 22 0 1169 276 55 82 chr10 85712082 85712792 -54603973 - MER21B LTR ERV1 -149 714 24 293 291 82 38 chr10 85713045 85713203 -54603562 + MIR SINE MIR 36 200 -62 244 264 132 9 chr10 85714278 85714384 -54602381 - MIR SINE MIR -142 120 2 334 333 68 10 chr10 85714420 85714627 -54602138 + L3 LINE CR1 1284 1502 -75 21 0 0 0 chr10 85715239 85715260 -54601505 + AT_rich Low_complexity Low_complexity 1 21 0 499 305 77 18 chr10 85715621 85715906 -54600859 - MER46C DNA MER2_type -34 304 3 249 323 104 17 chr10 85715917 85716077 -54600688 - MIR SINE MIR -27 235 63 1539 218 61 21 chr10 85716077 85716454 -54600311 + MSTD LTR MaLR 1 392 -4 249 323 104 17 chr10 85716454 85716476 -54600289 - MIR SINE MIR -199 63 44 311 341 65 7 chr10 85717780 85717918 -54598847 + MIR SINE MIR 5 150 -112 195 69 0 0 chr10 85717999 85718028 -54598737 + (TTA)n Simple_repeat Simple_repeat 1 29 0 389 229 14 4 chr10 85718870 85718966 -54597799 + MLT1A1 LTR MaLR 22 101 -264 1976 59 0 0 chr10 85718968 85719204 -54597561 + AluY SINE Alu 1 236 -75 1211 50 0 0 chr10 85719204 85719345 -54597420 + AluY SINE Alu 158 298 -13 1153 190 9 9 chr10 85719345 85719561 -54597204 + MLT1A1 LTR MaLR 148 363 -2 1993 128 7 7 chr10 85719845 85720142 -54596623 + AluSx SINE Alu 2 298 -14 226 266 255 0 chr10 85720492 85720586 -54596179 + MER94 DNA DNA 3 120 -14 210 143 0 0 chr10 85721044 85721079 -54595686 + (TG)n Simple_repeat Simple_repeat 2 36 0 2365 82 3 0 chr10 85721478 85721771 -54594994 - AluY SINE Alu -17 294 1 235 274 32 11 chr10 85722426 85722521 -54594244 + MLT1K LTR MaLR 492 588 0 1824 135 0 24 chr10 85723556 85723895 -54592870 - AluJb SINE Alu 0 332 1 243 0 0 0 chr10 85724585 85724612 -54592153 + (A)n Simple_repeat Simple_repeat 1 27 0 6479 174 29 44 chr10 85724863 85726189 -54590576 + L1MC1 LINE L1 2 1308 -5118 6632 212 35 53 chr10 85726192 85729084 -54587681 + L1MC1 LINE L1 1710 4653 -1960 1170 148 0 0 chr10 85729084 85729253 -54587512 + AluSg/x SINE Alu 117 285 -27 6632 212 35 53 chr10 85729253 85729529 -54587236 + L1MC1 LINE L1 4653 4932 -1681 2292 107 0 0 chr10 85729529 85729820 -54586945 + AluSg SINE Alu 3 293 -17 6632 212 35 53 chr10 85729820 85731165 -54585600 + L1MC1 LINE L1 4932 6300 -313 1634 159 7 28 chr10 85731165 85731455 -54585310 + AluJo SINE Alu 1 284 -28 222 37 0 0 chr10 85731458 85731485 -54585280 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 6632 212 35 53 chr10 85731485 85731850 -54584915 + L1MC1 LINE L1 6302 6611 -2 264 163 12 38 chr10 85731851 85731958 -54584807 + (TTATA)n Simple_repeat Simple_repeat 1 104 0 1522 248 58 23 chr10 85731960 85732909 -54583856 + L1MC/D LINE L1 4661 5640 -602 2414 242 13 13 chr10 85732928 85733528 -54583237 + L1MD2 LINE L1 5528 6127 -232 488 290 55 72 chr10 85733682 85734441 -54582324 + L1MEd LINE L1 511 1256 -4863 287 287 14 29 chr10 85734436 85734581 -54582184 + L1M3 LINE L1 5461 5599 -567 * 415 287 28 66 chr10 85734924 85735395 -54581370 - L1MEd LINE L1 -4946 1173 721 727 217 9 91 chr10 85735854 85736075 -54580690 - MER20 DNA MER1_type 0 219 17 280 171 0 0 chr10 85736073 85736114 -54580651 + FRAM/FAM SINE Alu 28 68 -98 * 2114 127 0 13 chr10 85736124 85736438 -54580327 + AluSq SINE Alu 1 310 -3 262 287 69 55 chr10 85736536 85736738 -54580027 - L1MEd LINE L1 -5913 206 2 334 322 87 17 chr10 85737180 85737295 -54579470 + MIR SINE MIR 11 133 -129 1346 229 26 16 chr10 85737377 85737683 -54579082 + AluJo SINE Alu 1 309 -3 269 250 11 33 chr10 85738400 85738492 -54578273 + L1MC4 LINE L1 6613 6702 -1340 247 204 34 0 chr10 85738511 85738599 -54578166 + (CATA)n Simple_repeat Simple_repeat 2 92 0 2049 132 23 0 chr10 85739135 85739439 -54577326 - AluSx SINE Alu -1 311 1 264 149 0 0 chr10 85739821 85739868 -54576897 + (T)n Simple_repeat Simple_repeat 1 47 0 571 282 82 98 chr10 85740241 85740719 -54576046 - MLT1G3 LTR MaLR -5 544 1 2219 76 3 40 chr10 85741422 85741725 -54575040 - AluY SINE Alu -19 292 1 550 235 88 2 chr10 85742186 85742370 -54574395 + MER110A LTR ERV1 311 484 0 1445 169 38 13 chr10 85742397 85742758 -54574007 + L1M2 LINE L1 5088 5460 -743 2064 187 65 22 chr10 85742758 85743202 -54573563 - LTR32 LTR ERVL 0 471 9 584 131 163 15 chr10 85743165 85743373 -54573392 - LTR29 LTR ERV1 -356 266 1 * 36 53 0 0 chr10 85743385 85743442 -54573323 + AT_rich Low_complexity Low_complexity 1 57 0 2025 167 112 116 chr10 85743742 85743906 -54572859 + LTR8A LTR ERV1 1 164 -563 3793 138 39 0 chr10 85743906 85744517 -54572248 - MER41B LTR ERV1 0 635 1 2025 167 112 116 chr10 85744517 85745082 -54571683 + LTR8A LTR ERV1 164 727 0 226 245 0 0 chr10 85745083 85745132 -54571633 + (CATA)n Simple_repeat Simple_repeat 4 52 0 480 77 0 0 chr10 85745823 85745888 -54570877 + (TG)n Simple_repeat Simple_repeat 2 66 0 195 297 62 69 chr10 85746260 85746405 -54570360 + MIR3 SINE MIR 64 207 -1 1524 122 196 8 chr10 85747692 85747947 -54568818 - AluSg1 SINE Alu -6 303 1 230 373 118 9 chr10 85748068 85748178 -54568587 - L2 LINE L2 0 3272 3151 458 216 129 17 chr10 85748979 85749095 -54567670 - FLAM_C SINE Alu -3 130 2 5567 86 3 3 chr10 85749147 85749878 -54566887 - LTR17 LTR ERV1 -49 731 1 191 221 94 71 chr10 85750095 85750222 -54566543 - L2 LINE L2 -837 2477 2348 22 80 0 0 chr10 85751817 85751867 -54564898 + AT_rich Low_complexity Low_complexity 1 50 0 1520 160 7 45 chr10 85752100 85752388 -54564377 - AluSx SINE Alu -24 288 12 200 213 0 21 chr10 85753011 85753058 -54563707 + MIR SINE MIR 167 212 -50 357 323 184 14 chr10 85753768 85753985 -54562780 - MIR SINE MIR -3 259 6 461 321 158 38 chr10 85753990 85754520 -54562245 + L3 LINE CR1 961 1554 -23 1384 258 146 19 chr10 85756308 85756790 -54559975 - MLT1E1 LTR MaLR -8 635 104 403 287 19 0 chr10 85756761 85756869 -54559896 - MLT1E LTR MaLR -433 160 51 * 411 38 0 0 chr10 85757616 85757669 -54559096 + (TG)n Simple_repeat Simple_repeat 1 53 0 246 32 0 0 chr10 85757668 85757699 -54559066 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 21 0 0 0 chr10 85758216 85758237 -54558528 + AT_rich Low_complexity Low_complexity 1 21 0 229 365 64 100 chr10 85759896 85760225 -54556540 + L2 LINE L2 2953 3269 -3 1782 110 0 0 chr10 85760406 85760642 -54556123 + AluSq SINE Alu 1 236 -77 225 0 0 0 chr10 85761139 85761164 -54555601 + (CA)n Simple_repeat Simple_repeat 2 26 0 327 308 71 44 chr10 85761699 85761881 -54554884 - MIR SINE MIR -27 235 49 201 74 0 0 chr10 85762277 85762304 -54554461 + (CA)n Simple_repeat Simple_repeat 2 28 0 1078 154 6 16 chr10 85762435 85762617 -54554148 + AluSg/x SINE Alu 118 297 -13 198 376 87 0 chr10 85763177 85763350 -54553415 + L2 LINE L2 2310 2497 -817 388 340 53 19 chr10 85764978 85765184 -54551581 - MIR SINE MIR -21 241 29 753 45 9 1 chr10 85765259 85765358 -54551407 - L1PA6 LINE L1 -191 5963 5875 1392 78 0 11 chr10 85765358 85765549 -54551216 + L1PA6 LINE L1 5963 6151 -3 25 99 0 0 chr10 85766165 85766246 -54550519 + AT_rich Low_complexity Low_complexity 1 81 0 249 183 0 50 chr10 85766433 85766493 -54550272 + GA-rich Low_complexity Low_complexity 2 58 0 207 100 0 0 chr10 85766772 85766802 -54549963 + (T)n Simple_repeat Simple_repeat 1 30 0 207 323 70 7 chr10 85767820 85767954 -54548811 - MER5B DNA MER1_type 0 189 29 6139 208 40 72 chr10 85768110 85768539 -54548226 - L1MB7 LINE L1 -65 6355 5914 2308 91 0 0 chr10 85768539 85768836 -54547929 + AluY SINE Alu 1 297 -14 6139 208 40 72 chr10 85768836 85771299 -54545466 - L1MB7 LINE L1 -506 5914 3552 281 89 22 0 chr10 85771299 85771344 -54545421 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 6139 208 40 72 chr10 85771344 85771537 -54545228 - L1MB7 LINE L1 -2868 3552 3354 1721 221 92 19 chr10 85771538 85771608 -54545157 - L1MB7 LINE L1 -3428 2954 2890 13239 152 47 9 chr10 85771608 85773448 -54543317 - Tigger1 DNA MER2_type -1 2417 469 2164 132 6 3 chr10 85773448 85773759 -54543006 - AluSq SINE Alu -1 312 1 13239 152 47 9 chr10 85773759 85774247 -54542518 - Tigger1 DNA MER2_type -1949 469 1 1721 221 92 19 chr10 85774247 85774866 -54541899 - L1MB7 LINE L1 -3492 2890 2222 207 0 0 0 chr10 85774869 85774892 -54541873 + (TA)n Simple_repeat Simple_repeat 1 23 0 186 43 0 0 chr10 85774908 85774931 -54541834 + (T)n Simple_repeat Simple_repeat 1 23 0 2720 10 0 0 chr10 85774934 85775242 -54541523 - L1HS LINE L1 0 6155 5848 2254 84 14 0 chr10 85775264 85775561 -54541204 - AluY SINE Alu -10 301 1 402 250 101 93 chr10 85775564 85775853 -54540912 - L1M4c LINE L1 -4184 2462 2232 1812 170 0 29 chr10 85775853 85776164 -54540601 - AluJb SINE Alu -10 302 1 402 250 101 93 chr10 85776164 85776264 -54540501 - L1M4c LINE L1 -4414 2232 2134 458 184 10 10 chr10 85776268 85776371 -54540394 - L1MB8 LINE L1 -53 6125 6023 3546 193 34 37 chr10 85776475 85777774 -54538991 - L1MA9 LINE L1 -194 6006 4716 2229 88 0 3 chr10 85777774 85778058 -54538707 - AluSc SINE Alu -24 285 3 3546 193 34 37 chr10 85778058 85778160 -54538605 - L1MA9 LINE L1 -1484 4716 4615 935 248 18 5 chr10 85778165 85778387 -54538378 - L1MA9 LINE L1 -5716 239 15 5603 224 30 37 chr10 85778400 85780111 -54536654 - L1M4c LINE L1 -4729 1917 210 4033 113 180 82 chr10 85780111 85781415 -54535350 - pTR5 LTR ERV1 -143 2295 281 717 194 32 59 chr10 85781428 85781614 -54535151 - L1M4c LINE L1 -6360 182 2 189 0 0 0 chr10 85784263 85784284 -54532481 + (CA)n Simple_repeat Simple_repeat 1 21 0 2062 190 44 72 chr10 85784817 85785385 -54531380 + MER92C LTR ERV1 1 552 -2 2179 111 7 3 chr10 85787207 85787505 -54529260 + AluSc SINE Alu 1 299 -10 1677 207 27 0 chr10 85787914 85788252 -54528513 + MER7A DNA MER2_type 2 346 0 2052 131 0 0 chr10 85788347 85788672 -54528093 + AluSx SINE Alu 1 325 0 23 33 0 0 chr10 85788983 85789013 -54527752 + AT_rich Low_complexity Low_complexity 1 30 0 473 286 23 8 chr10 85789586 85789719 -54527046 + L2 LINE L2 3129 3263 -50 203 290 245 2 chr10 85790395 85790520 -54526245 - MIR SINE MIR -61 147 4 420 267 99 134 chr10 85792616 85793242 -54523523 - L1M2 LINE L1 -5490 1359 417 320 299 79 106 chr10 85793007 85793488 -54523277 + L1M2 LINE L1 539 1006 -5843 * 318 294 144 71 chr10 85793330 85793656 -54523109 - L1M2 LINE L1 -6024 825 476 * 395 282 55 103 chr10 85793797 85794194 -54522571 + L1M2 LINE L1 859 1236 -5613 205 138 0 0 chr10 85794262 85794291 -54522474 + (TCC)n Simple_repeat Simple_repeat 1 29 0 180 97 0 0 chr10 85799346 85799377 -54517388 + (T)n Simple_repeat Simple_repeat 1 31 0 237 250 0 26 chr10 85800568 85800644 -54516121 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 244 309 0 32 chr10 85800666 85800760 -54516005 + MIR SINE MIR 75 165 -97 964 208 107 41 chr10 85802636 85802954 -54513811 - MER2 DNA MER2_type -6 339 1 1366 174 37 30 chr10 85802954 85803253 -54513512 - L1MA10 LINE L1 -35 6299 5999 1207 66 12 6 chr10 85804185 85804351 -54512414 + L1PA10 LINE L1 6000 6166 -2 580 304 103 42 chr10 85805859 85806307 -54510458 - MLT1J LTR MaLR -12 499 25 312 27 0 0 chr10 85807977 85808014 -54508751 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 360 47 0 chr10 85809968 85810054 -54506711 + L2 LINE L2 3122 3211 -61 291 336 43 0 chr10 85810166 85810282 -54506483 - MIR SINE MIR -56 206 86 269 271 98 8 chr10 85810369 85810491 -54506274 + MER103 DNA DNA 21 153 -13 399 21 0 0 chr10 85811187 85811235 -54505530 + (CA)n Simple_repeat Simple_repeat 2 49 0 416 253 195 11 chr10 85811289 85811463 -54505302 + MIR SINE MIR 53 258 -4 22 0 0 0 chr10 85811685 85811707 -54505058 + AT_rich Low_complexity Low_complexity 1 22 0 910 219 10 10 chr10 85811900 85812092 -54504673 - AluJo SINE Alu -22 290 99 246 208 146 0 chr10 85812100 85812196 -54504569 + L1 LINE L1 3370 3479 -2667 633 170 0 0 chr10 85812205 85812305 -54504460 - AluJo SINE Alu -212 100 1 508 154 74 17 chr10 85812310 85812485 -54504280 - Charlie1 DNA MER1_type -47 2714 2530 10859 219 45 30 chr10 85812532 85817836 -54498929 - L1MB1 LINE L1 -1 6403 1034 21 0 0 0 chr10 85817913 85817934 -54498831 + AT_rich Low_complexity Low_complexity 1 21 0 989 192 106 0 chr10 85817954 85818152 -54498613 + MER20 DNA MER1_type 1 219 0 668 231 25 0 chr10 85818412 85818582 -54498183 + Charlie1a DNA MER1_type 1 187 -1268 261 200 0 50 chr10 85818625 85818685 -54498080 - MLT1J LTR MaLR -315 196 140 264 290 0 0 chr10 85820886 85820955 -54495810 - MIR3 SINE MIR -34 174 106 25 31 0 0 chr10 85821417 85821449 -54495316 + AT_rich Low_complexity Low_complexity 1 32 0 3827 149 19 4 chr10 85822204 85823069 -54493696 + L1MA1 LINE L1 4562 5444 -743 1030 128 24 9 chr10 85823063 85823274 -54493491 + L1MA1 LINE L1 5967 6180 -122 * 23 54 0 0 chr10 85823296 85823333 -54493432 + AT_rich Low_complexity Low_complexity 1 37 0 735 143 27 8 chr10 85823397 85823545 -54493220 - L1MA2 LINE L1 -135 6033 5887 1908 146 3 34 chr10 85823688 85823823 -54492942 + AluSx SINE Alu 1 139 -173 2063 103 4 4 chr10 85823823 85824096 -54492669 + AluSg SINE Alu 1 273 -37 185 0 40 0 chr10 85824103 85824128 -54492637 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1908 146 3 34 chr10 85824128 85824306 -54492459 + AluSx SINE Alu 145 312 0 391 325 86 0 chr10 85824394 85824557 -54492208 + MIR SINE MIR 60 236 -26 212 266 12 0 chr10 85824935 85824990 -54491775 + MIR SINE MIR 64 122 -86 346 326 109 18 chr10 85825065 85825396 -54491369 - MLT1L LTR MaLR -102 513 153 181 296 31 80 chr10 85825465 85825627 -54491138 + MIR SINE MIR 44 197 -65 254 253 213 0 chr10 85826978 85827053 -54489712 - L2 LINE L2 0 3272 3182 1823 330 134 20 chr10 85827288 85827449 -54489316 - L2 LINE L2 -444 2870 2729 2068 148 0 0 chr10 85827449 85827752 -54489013 - AluSx SINE Alu -9 303 1 1823 330 134 20 chr10 85827752 85828874 -54487891 - L2 LINE L2 -585 2729 1441 286 283 40 96 chr10 85829193 85829370 -54487395 + L2 LINE L2 2915 3081 -191 1495 233 64 54 chr10 85829893 85830391 -54486374 + MLT1D LTR MaLR 1 503 -2 216 352 40 16 chr10 85830734 85830859 -54485906 + MIR SINE MIR 19 146 -62 21 0 0 0 chr10 85830936 85830957 -54485808 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 85831043 85831064 -54485701 + (TGAG)n Simple_repeat Simple_repeat 3 23 0 226 313 188 0 chr10 85831454 85831550 -54485215 + L2 LINE L2 3144 3257 -15 212 0 0 35 chr10 85832601 85832630 -54484135 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 204 125 0 0 chr10 85832918 85832950 -54483815 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2317 95 0 0 chr10 85833026 85833320 -54483445 + AluSg SINE Alu 1 294 -16 1197 142 0 16 chr10 85833321 85833511 -54483254 + AluSg/x SINE Alu 124 310 0 390 42 0 0 chr10 85834177 85834225 -54482540 + (TG)n Simple_repeat Simple_repeat 2 49 0 252 210 161 0 chr10 85834303 85834365 -54482400 + MIR SINE MIR 117 188 -74 427 225 0 0 chr10 85834375 85834455 -54482310 - L2 LINE L2 -9 3304 3225 2253 90 3 7 chr10 85835221 85835522 -54481243 + AluSg SINE Alu 1 300 -10 312 318 56 28 chr10 85836358 85836512 -54480253 - MIR SINE MIR -64 144 5 293 389 60 19 chr10 85837345 85837561 -54479204 - L2 LINE L2 -549 2765 2541 22 0 0 0 chr10 85837958 85837980 -54478785 + AT_rich Low_complexity Low_complexity 1 22 0 337 280 19 37 chr10 85838516 85838623 -54478142 - MLT1J2 LTR MaLR -3 447 343 746 322 96 30 chr10 85838631 85839090 -54477675 + LTR33 LTR ERVL 26 514 -7 254 340 29 10 chr10 85841175 85841278 -54475487 - MIR SINE MIR -66 196 92 219 302 35 23 chr10 85841376 85841462 -54475303 + L3 LINE CR1 1488 1574 -3 585 311 21 0 chr10 85841659 85841849 -54474916 + MIR SINE MIR 69 262 0 2134 134 21 16 chr10 85841876 85842249 -54474516 - THE1C LTR MaLR 0 375 1 303 335 57 6 chr10 85842273 85842431 -54474334 - MIR SINE MIR 0 262 97 345 281 8 62 chr10 85846293 85846421 -54470344 + MIR SINE MIR 24 144 -64 371 162 81 0 chr10 85846431 85846505 -54470260 + MER116 DNA Mariner 1 80 0 247 176 20 0 chr10 85847177 85847228 -54469537 - Charlie7 DNA MER1_type -2511 101 50 1567 166 76 26 chr10 85847552 85847896 -54468869 + MER46B DNA MER2_type 1 236 0 197 273 45 15 chr10 85847957 85848023 -54468742 + L2 LINE L2 3227 3294 -19 21 0 0 0 chr10 85848037 85848058 -54468707 + AT_rich Low_complexity Low_complexity 1 21 0 465 320 84 42 chr10 85848142 85848570 -54468195 - MLT1L LTR MaLR -74 541 96 1555 164 21 38 chr10 85848784 85849071 -54467694 - AluJo SINE Alu -30 282 1 27 49 0 0 chr10 85849594 85849635 -54467130 + AT_rich Low_complexity Low_complexity 1 41 0 2207 98 3 25 chr10 85850258 85850573 -54466192 - AluSq SINE Alu -5 308 1 243 61 0 0 chr10 85850755 85850788 -54465977 + (TG)n Simple_repeat Simple_repeat 2 34 0 668 257 65 47 chr10 85852383 85852597 -54464168 - MER20 DNA MER1_type -1 218 1 943 216 116 24 chr10 85853956 85854206 -54462559 + AluJo SINE Alu 21 293 -19 192 313 172 0 chr10 85855444 85855508 -54461257 - L2 LINE L2 -61 3211 3137 411 21 0 0 chr10 85856850 85856898 -54459867 + (CA)n Simple_repeat Simple_repeat 2 49 0 329 287 87 9 chr10 85857320 85857435 -54459330 + L2 LINE L2 3168 3291 -22 283 357 63 0 chr10 85857482 85857608 -54459157 + L2 LINE L2 3138 3271 -1 244 149 45 30 chr10 85857946 85858013 -54458752 + L1M4 LINE L1 3885 3952 -2194 36 62 0 0 chr10 85858163 85858227 -54458538 + AT_rich Low_complexity Low_complexity 1 64 0 269 339 46 15 chr10 85859665 85859795 -54456970 + MIR SINE MIR 51 184 -78 451 286 66 44 chr10 85859812 85859994 -54456771 - MIR SINE MIR -1 261 76 194 0 39 0 chr10 85860595 85860621 -54456144 + (TTA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 85861364 85861392 -54455373 + AT_rich Low_complexity Low_complexity 1 28 0 2113 118 90 6 chr10 85862677 85863023 -54453742 - THE1C LTR MaLR 0 375 1 398 266 0 0 chr10 85863429 85863508 -54453257 + MER2 DNA MER2_type 1 79 -266 635 292 83 37 chr10 85863599 85864054 -54452711 + HAL1b LINE L1 406 881 -467 2108 109 3 22 chr10 85864268 85864579 -54452186 + AluSq SINE Alu 1 305 -8 186 336 88 44 chr10 85865312 85865449 -54451316 - L2 LINE L2 -60 3212 3070 1130 263 67 40 chr10 85865909 85866297 -54450468 - MER74B LTR ERVL -56 566 160 2246 65 0 4 chr10 85866297 85866597 -54450168 + AluY SINE Alu 8 306 0 1130 263 67 40 chr10 85866597 85866686 -54450079 - MER74B LTR ERVL -462 160 75 548 268 127 103 chr10 85866721 85867471 -54449294 + L2 LINE L2 2144 2911 -403 257 292 60 114 chr10 85867510 85867808 -54448957 + L2 LINE L2 3030 3311 -2 744 279 9 18 chr10 85868323 85868549 -54448216 + MER58A DNA MER1_type 1 224 0 438 101 0 0 chr10 85869174 85869243 -54447522 + (CA)n Simple_repeat Simple_repeat 1 69 0 381 327 60 30 chr10 85869329 85869528 -54447237 + MIR SINE MIR 52 256 -6 260 362 81 22 chr10 85869769 85869918 -54446847 + L2 LINE L2 2525 2664 -650 2471 76 0 0 chr10 85869918 85870222 -54446543 - AluY SINE Alu -7 304 1 260 362 81 22 chr10 85870222 85870343 -54446422 + L2 LINE L2 2664 2811 -503 185 341 119 32 chr10 85870681 85870733 -54446032 + L2 LINE L2 3136 3182 -90 225 0 0 0 chr10 85870733 85870758 -54446007 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 185 341 119 32 chr10 85870758 85870831 -54445934 + L2 LINE L2 3182 3272 0 413 295 108 12 chr10 85871570 85871736 -54445029 - MIR SINE MIR -61 201 20 193 29 59 0 chr10 85872120 85872154 -54444611 + (TA)n Simple_repeat Simple_repeat 1 36 0 312 324 94 6 chr10 85872171 85872341 -54444424 - L1M4 LINE L1 -1059 5087 4903 230 224 0 15 chr10 85872393 85872460 -54444305 - L1MCa LINE L1 -4355 2071 2006 1209 132 0 0 chr10 85872496 85872663 -54444102 - AluSx SINE Alu -145 167 1 230 222 144 0 chr10 85872712 85872802 -54443963 - L1ME LINE L1 -689 5473 5371 301 309 95 18 chr10 85872861 85873029 -54443736 - L1ME LINE L1 -1021 5125 4945 244 345 0 45 chr10 85875565 85875675 -54441090 - L2 LINE L2 -16 3297 3193 496 279 111 17 chr10 85876551 85876849 -54439916 + HAL1 LINE L1 1249 1574 -933 292 316 176 7 chr10 85877585 85877721 -54439044 + MIR3 SINE MIR 7 165 -43 3326 122 0 79 chr10 85877821 85877959 -54438806 - MER1A DNA MER1_type -2173 527 380 1929 112 18 4 chr10 85877959 85878237 -54438528 - AluSx SINE Alu -30 282 1 3326 122 0 79 chr10 85878237 85878670 -54438095 - MER1A DNA MER1_type -2320 380 1 231 384 14 41 chr10 85878682 85878828 -54437937 + MIR SINE MIR 5 146 -116 207 0 0 0 chr10 85879186 85879209 -54437556 + (T)n Simple_repeat Simple_repeat 1 23 0 254 305 68 17 chr10 85879987 85880105 -54436660 + MIR SINE MIR 21 144 -118 1293 241 31 8 chr10 85880421 85880774 -54435991 - MLT1A1 LTR MaLR 0 365 5 222 118 0 0 chr10 85881134 85881168 -54435597 + (TAA)n Simple_repeat Simple_repeat 2 35 0 447 317 58 5 chr10 85881674 85881879 -54434886 + MIR SINE MIR 38 253 -9 276 260 77 29 chr10 85881913 85882017 -54434748 + L2 LINE L2 2618 2726 -588 223 296 111 58 chr10 85882317 85882506 -54434259 + L2 LINE L2 3112 3310 -3 22 56 0 0 chr10 85883450 85883486 -54433279 + AT_rich Low_complexity Low_complexity 1 36 0 1962 93 0 12 chr10 85883544 85883802 -54432963 + AluSq SINE Alu 35 289 -24 185 191 0 48 chr10 85883847 85883889 -54432876 + L2 LINE L2 3030 3069 -203 421 269 19 0 chr10 85884205 85884313 -54432452 + Charlie8 DNA MER1_type 75 184 -2233 337 254 18 27 chr10 85885515 85885625 -54431140 + GA-rich Low_complexity Low_complexity 4 112 0 444 305 8 8 chr10 85885993 85886121 -54430644 - MIR SINE MIR -33 229 102 332 294 34 17 chr10 85886122 85886241 -54430524 - MIR SINE MIR -43 219 99 287 360 159 32 chr10 85886489 85887242 -54429523 + L2 LINE L2 524 1372 -1942 298 339 74 47 chr10 85887247 85887610 -54429155 + L2 LINE L2 2576 2948 -366 4458 176 31 62 chr10 85888138 85888328 -54428437 + L1MC3 LINE L1 6687 6881 -904 189 0 0 0 chr10 85888328 85888349 -54428416 + (CA)n Simple_repeat Simple_repeat 2 22 0 4458 176 31 62 chr10 85888349 85889254 -54427511 + L1MC3 LINE L1 6881 7748 -37 2140 126 0 3 chr10 85889254 85889267 -54427498 - AluSx SINE Alu -20 292 280 199 0 65 0 chr10 85889267 85889298 -54427467 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2140 126 0 3 chr10 85889298 85889577 -54427188 - AluSx SINE Alu -32 280 1 2289 108 0 0 chr10 85889599 85889895 -54426870 - AluSg SINE Alu -14 296 1 26 0 0 0 chr10 85890803 85890829 -54425936 + AT_rich Low_complexity Low_complexity 1 26 0 1981 149 10 0 chr10 85891161 85891457 -54425308 + AluSx SINE Alu 1 299 -13 203 392 48 32 chr10 85891527 85891652 -54425113 + MIR SINE MIR 8 134 -128 187 385 0 0 chr10 85892433 85892511 -54424254 - MIR SINE MIR -73 135 58 1568 205 0 26 chr10 85893319 85893626 -54423139 + AluJo SINE Alu 1 299 -13 227 56 56 0 chr10 85893629 85893665 -54423100 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2325 148 23 35 chr10 85894556 85894753 -54422012 + MSTB LTR MaLR 1 199 -227 2169 116 24 40 chr10 85894753 85895131 -54421634 + THE1C LTR MaLR 1 372 -3 3170 105 40 8 chr10 85895131 85895626 -54421139 - MER9 LTR ERVK 0 511 1 2325 148 23 35 chr10 85895626 85895858 -54420907 + MSTB LTR MaLR 197 426 0 283 331 63 11 chr10 85896382 85896557 -54420208 - MIR SINE MIR -2 260 77 26 0 0 0 chr10 85896716 85896742 -54420023 + AT_rich Low_complexity Low_complexity 1 26 0 215 103 26 0 chr10 85897276 85897315 -54419450 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 308 51 0 chr10 85897565 85897643 -54419122 - L2 LINE L2 -783 2531 2450 1789 307 261 37 chr10 85897722 85897826 -54418939 - L2 LINE L2 -983 2331 2252 1874 109 77 57 chr10 85897826 85898192 -54418573 - THE1C LTR MaLR 0 375 3 1789 307 261 37 chr10 85898192 85899943 -54416822 - L2 LINE L2 -1062 2252 60 499 274 67 6 chr10 85900618 85900782 -54415983 + MER5B DNA MER1_type 2 175 -3 249 186 0 0 chr10 85901894 85901937 -54414828 - MIR SINE MIR -103 159 117 866 174 56 6 chr10 85903360 85903538 -54413227 - MER5A DNA MER1_type 0 189 3 674 270 71 13 chr10 85903547 85903773 -54412992 + MIR SINE MIR 24 262 0 299 316 46 40 chr10 85904315 85904467 -54412298 + MER117 DNA MER1_type 2 154 -43 486 302 137 6 chr10 85904954 85905136 -54411629 + MIR SINE MIR 57 262 0 588 338 55 35 chr10 85905577 85905944 -54410821 - L2 LINE L2 0 3313 2940 21 107 0 0 chr10 85907077 85907161 -54409604 + AT_rich Low_complexity Low_complexity 1 84 0 23 0 0 0 chr10 85907799 85907822 -54408943 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr10 85908376 85908410 -54408355 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 85910845 85910866 -54405899 + AT_rich Low_complexity Low_complexity 1 21 0 243 340 73 89 chr10 85912520 85912835 -54403930 + L2 LINE L2 2951 3260 -12 387 0 0 0 chr10 85915946 85915989 -54400776 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 771 266 26 0 chr10 85916182 85916374 -54400391 + MIR SINE MIR 4 200 -62 188 240 93 40 chr10 85916502 85916577 -54400188 - MER5B DNA MER1_type -71 107 29 263 274 0 14 chr10 85920021 85920094 -54396671 + (TG)n Simple_repeat Simple_repeat 2 73 0 2252 93 0 0 chr10 85920267 85920580 -54396185 - AluSg SINE Alu 0 315 3 2230 152 62 0 chr10 85920787 85921189 -54395576 + MSTA LTR MaLR 1 427 -1 472 296 107 0 chr10 85921915 85922084 -54394681 - MIR SINE MIR -14 248 62 307 261 84 0 chr10 85922235 85922383 -54394382 - L2 LINE L2 -1 3312 3187 2350 56 3 33 chr10 85924336 85924640 -54392125 - AluY SINE Alu -16 295 1 207 69 0 0 chr10 85924665 85924694 -54392071 + (CA)n Simple_repeat Simple_repeat 2 30 0 3667 238 50 30 chr10 85924804 85924853 -54391912 + L1MD1 LINE L1 4264 4311 -1931 192 77 0 0 chr10 85924853 85924879 -54391886 + (CA)n Simple_repeat Simple_repeat 2 27 0 3667 238 50 30 chr10 85924879 85926763 -54390002 + L1MD1 LINE L1 4311 6236 -6 339 25 0 0 chr10 85928240 85928280 -54388485 + (TG)n Simple_repeat Simple_repeat 2 41 0 349 359 99 53 chr10 85929628 85930040 -54386725 - L2 LINE L2 0 3272 2842 1383 159 4 0 chr10 85930325 85930583 -54386182 - L1MA4A LINE L1 -2 6301 6043 3105 159 5 18 chr10 85930587 85931159 -54385606 - L1PA16 LINE L1 -16 6150 5586 25 65 0 0 chr10 85931498 85931544 -54385221 + AT_rich Low_complexity Low_complexity 1 46 0 1655 197 7 10 chr10 85931667 85931967 -54384798 + AluJo SINE Alu 3 301 -11 250 146 0 0 chr10 85931967 85932008 -54384757 + (GA)n Simple_repeat Simple_repeat 1 41 0 566 130 0 10 chr10 85932009 85932109 -54384656 + (GGAA)n Simple_repeat Simple_repeat 4 102 0 763 243 44 15 chr10 85933063 85933269 -54383496 - MIR SINE MIR -40 222 11 747 261 6 0 chr10 85933388 85933564 -54383201 + MER58A DNA MER1_type 48 224 0 364 278 24 44 chr10 85933978 85934183 -54382582 + L1MC5 LINE L1 7707 7907 -54 610 193 0 83 chr10 85934647 85934792 -54381973 + FLAM_A SINE Alu 1 133 0 250 260 156 0 chr10 85935187 85935264 -54381501 - L2 LINE L2 0 3313 3225 282 167 0 0 chr10 85935460 85935520 -54381245 + (TA)n Simple_repeat Simple_repeat 1 60 0 372 250 110 29 chr10 85936112 85936248 -54380517 - MER3 DNA MER1_type -56 153 7 198 0 0 0 chr10 85937142 85937164 -54379601 + (CA)n Simple_repeat Simple_repeat 2 23 0 2299 75 0 0 chr10 85937394 85937698 -54379067 + AluSg1 SINE Alu 2 305 0 916 254 107 22 chr10 85937735 85938137 -54378628 - L1MC/D LINE L1 -2058 5750 5315 182 91 30 0 chr10 85938317 85938350 -54378415 + CT-rich Low_complexity Low_complexity 2 35 0 927 213 71 3 chr10 85938407 85938730 -54378035 - MLT1E1 LTR MaLR -191 433 1 2604 55 0 3 chr10 85938789 85939100 -54377665 - AluY SINE Alu -1 310 1 2398 65 0 3 chr10 85939227 85939520 -54377245 - AluY SINE Alu -19 292 1 326 350 68 14 chr10 85939619 85939899 -54376866 - L1MC/D LINE L1 -1486 4660 4366 660 310 52 28 chr10 85939950 85940521 -54376244 - L1MC/D LINE L1 -1867 4279 3695 21 0 0 0 chr10 85940547 85940568 -54376197 + AT_rich Low_complexity Low_complexity 1 21 0 2580 51 3 6 chr10 85940647 85940959 -54375806 + AluY SINE Alu 1 311 0 279 56 0 0 chr10 85941918 85941954 -54374811 + MADE1 DNA Mariner 1 36 -44 21 57 0 0 chr10 85942247 85942282 -54374483 + AT_rich Low_complexity Low_complexity 1 35 0 207 69 0 0 chr10 85942382 85942411 -54374354 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 225 97 0 0 chr10 85942411 85942442 -54374323 - AluSx SINE Alu -22 280 250 1102 153 0 12 chr10 85942444 85942614 -54374151 - AluSx SINE Alu -144 168 1 186 276 122 68 chr10 85944151 85944372 -54372393 + L2 LINE L2 2470 2702 -612 184 122 49 0 chr10 85945010 85945051 -54371714 + CT-rich Low_complexity Low_complexity 1 43 0 664 269 24 53 chr10 85945870 85946078 -54370687 - MIR SINE MIR -5 257 56 348 298 119 36 chr10 85946164 85946332 -54370433 + MIR SINE MIR 77 258 -4 1830 148 18 3 chr10 85947129 85947413 -54369352 + AluSx SINE Alu 10 297 -15 1146 153 0 0 chr10 85947413 85947590 -54369175 + AluSg/x SINE Alu 134 310 -2 28 0 0 0 chr10 85947590 85947618 -54369147 + AT_rich Low_complexity Low_complexity 1 28 0 423 250 116 47 chr10 85948194 85948366 -54368399 + MIR SINE MIR 36 219 -43 280 274 34 94 chr10 85948591 85948708 -54368057 - MIR3 SINE MIR -6 202 93 2354 87 0 7 chr10 85948752 85949062 -54367703 + AluY SINE Alu 1 308 -3 238 299 83 42 chr10 85949070 85949214 -54367551 + MIR3 SINE MIR 19 168 -40 334 305 154 30 chr10 85949472 85949803 -54366962 - MARNA DNA Mariner -141 445 74 2024 101 66 0 chr10 85949886 85950172 -54366593 - AluSx SINE Alu -7 305 1 192 336 115 19 chr10 85950679 85950783 -54365982 + MIR3 SINE MIR 46 159 -49 291 284 102 8 chr10 85951521 85951648 -54365117 + L2 LINE L2 3175 3313 0 578 127 134 116 chr10 85951945 85952234 -54364531 - MER4C LTR ERV1 -9 655 157 * 1447 139 50 84 chr10 85952217 85952576 -54364189 - MER4A LTR ERV1 -317 347 1 214 294 186 0 chr10 85953013 85953115 -54363650 + L2 LINE L2 3192 3312 -1 326 306 149 8 chr10 85954667 85954801 -54361964 + MIR3 SINE MIR 40 192 -16 1080 152 38 62 chr10 85954925 85955135 -54361630 + LTR1B LTR ERV1 1 205 -621 1368 172 74 64 chr10 85955141 85955559 -54361206 + LTR1B LTR ERV1 379 826 0 281 364 30 0 chr10 85955573 85955705 -54361060 - MIR SINE MIR -3 259 124 3361 246 43 39 chr10 85957666 85958094 -54358671 - L1MDa LINE L1 -2320 3895 3470 2180 108 0 0 chr10 85958094 85958390 -54358375 - AluSq SINE Alu -17 296 1 3361 246 43 39 chr10 85958390 85959389 -54357376 - L1MDa LINE L1 -2745 3470 2462 1200 182 0 34 chr10 85959396 85959632 -54357133 - AluJo SINE Alu -1 311 84 632 241 28 8 chr10 85959632 85959849 -54356916 - L1MDa LINE L1 -3748 2467 2245 1692 264 75 55 chr10 85959853 85960066 -54356699 - L1MDa LINE L1 -4277 2119 1912 228 35 0 0 chr10 85960066 85960095 -54356670 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 1692 264 75 55 chr10 85960095 85960946 -54355819 - L1MDa LINE L1 -4484 1912 1034 259 250 0 0 chr10 85960944 85961004 -54355761 - L1MDa LINE L1 -6202 194 135 * 1261 191 94 43 chr10 85961959 85962330 -54354435 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr10 85962578 85962599 -54354166 + AT_rich Low_complexity Low_complexity 1 21 0 670 122 0 9 chr10 85962600 85962707 -54354058 - L1MA5A LINE L1 -5 6292 6187 235 226 0 0 chr10 85963620 85963682 -54353083 + T-rich Low_complexity Low_complexity 1 62 0 425 278 58 34 chr10 85964602 85964897 -54351868 - L1ME4a LINE L1 -236 5885 5584 238 226 143 83 chr10 85965728 85965861 -54350904 - MER103 DNA DNA -4 162 22 401 327 19 6 chr10 85966661 85966817 -54349948 - L3 LINE CR1 -7 1570 1413 1645 50 87 0 chr10 85968133 85968352 -54348413 + AluY SINE Alu 1 238 -73 228 67 0 0 chr10 85968362 85968392 -54348373 + (A)n Simple_repeat Simple_repeat 1 30 0 203 389 0 44 chr10 85968559 85968649 -54348116 - L2 LINE L2 -98 3174 3089 400 271 89 58 chr10 85969434 85969692 -54347073 + MLT1L LTR MaLR 348 613 -2 304 242 0 0 chr10 85969692 85969754 -54347011 - MIR SINE MIR -99 163 102 676 159 7 36 chr10 85969764 85969902 -54346863 + FRAM SINE Alu 41 174 -2 191 333 14 28 chr10 85969902 85969974 -54346791 - MIR SINE MIR -151 111 41 906 254 47 0 chr10 85970134 85970347 -54346418 - MER58A DNA MER1_type 0 224 2 1447 127 23 0 chr10 85970741 85970962 -54345803 - AluSg/x SINE Alu 0 312 87 2831 202 74 0 chr10 85971389 85972013 -54344752 - L1MB7 LINE L1 -182 6002 5333 2043 130 58 19 chr10 85973484 85973845 -54342920 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr10 85973860 85973893 -54342872 + AT_rich Low_complexity Low_complexity 1 33 0 181 219 49 0 chr10 85973894 85973935 -54342830 - L2 LINE L2 -963 2351 2309 698 132 9 0 chr10 85974996 85975102 -54341663 + U6 snRNA snRNA 1 107 0 1685 80 50 0 chr10 85975102 85975364 -54341401 + L1MA2 LINE L1 6030 6304 0 190 364 13 0 chr10 85975644 85975721 -54341044 + MIR SINE MIR 109 186 -76 1474 152 16 63 chr10 85975830 85976146 -54340619 - L1PB4 LINE L1 -3 6153 5853 348 129 48 0 chr10 85976146 85976208 -54340557 - L1PB4 LINE L1 -1336 4810 4746 3237 171 12 15 chr10 85976342 85977343 -54339422 - L1P5 LINE L1 -352 5804 4808 443 172 0 21 chr10 85977334 85977427 -54339338 + L1P5 LINE L1 4746 4836 -1310 * 1974 191 39 7 chr10 85977407 85977872 -54338893 + L1 LINE L1 4266 4745 -1401 40974 34 22 2 chr10 85978288 85984314 -54332451 - L1PA2 LINE L1 0 6155 5 225 350 60 104 chr10 85984538 85984924 -54331841 - L2 LINE L2 0 3272 2904 2385 60 0 13 chr10 85985121 85985422 -54331343 - AluY SINE Alu -14 297 1 221 368 0 0 chr10 85986339 85986407 -54330358 - L2 LINE L2 -4 3268 3201 225 159 0 0 chr10 85986413 85986457 -54330308 + (CA)n Simple_repeat Simple_repeat 1 44 0 504 314 109 0 chr10 85987223 85987452 -54329313 - L2 LINE L2 -748 2566 2313 1632 161 6 40 chr10 85988243 85988566 -54328199 - AluJo SINE Alu 0 312 1 2119 125 7 3 chr10 85988623 85988919 -54327846 - AluSq SINE Alu -16 297 1 1326 185 50 31 chr10 85991640 85992025 -54324740 - MSTC LTR MaLR 0 428 2 1099 218 74 85 chr10 85994858 85995330 -54321435 - MLT1C LTR MaLR 0 467 1 202 129 0 0 chr10 85995791 85995822 -54320943 - L2 LINE L2 -8 3264 3234 261 0 0 0 chr10 85996307 85996336 -54320429 + (A)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 85996459 85996480 -54320285 + AT_rich Low_complexity Low_complexity 1 21 0 360 119 0 0 chr10 85996629 85996688 -54320077 + (TG)n Simple_repeat Simple_repeat 2 60 0 1567 197 0 52 chr10 85996689 85996999 -54319766 - AluJo SINE Alu -18 294 1 229 297 135 38 chr10 85997479 85997745 -54319020 + L1ME LINE L1 5310 5601 -520 2293 77 0 7 chr10 85997748 85998066 -54318699 - AluY SINE Alu 0 316 1 207 225 99 70 chr10 86000369 86000440 -54316325 + MIR SINE MIR 38 110 -98 23 0 0 0 chr10 86000979 86001002 -54315763 + AT_rich Low_complexity Low_complexity 1 23 0 47 61 0 0 chr10 86001817 86001899 -54314866 + AT_rich Low_complexity Low_complexity 1 82 0 1742 166 3 31 chr10 86002022 86002348 -54314417 + AluSx SINE Alu 1 318 0 377 237 149 0 chr10 86002354 86002468 -54314297 + MIR SINE MIR 110 240 -22 1664 194 0 3 chr10 86003620 86003909 -54312856 - AluJb SINE Alu -24 288 1 3458 182 105 5 chr10 86004191 86004942 -54311823 - LTR1B LTR ERV1 0 826 1 324 127 0 0 chr10 86005255 86005310 -54311455 + (CA)n Simple_repeat Simple_repeat 2 56 0 200 318 61 15 chr10 86005314 86005380 -54311385 - L2 LINE L2 -30 3242 3174 223 324 27 27 chr10 86005746 86005820 -54310945 - L2 LINE L2 -6 3266 3193 1777 172 47 47 chr10 86005917 86006341 -54310424 - MSTB1 LTR MaLR -8 424 1 1789 163 0 0 chr10 86006927 86007203 -54309562 - AluSx SINE Alu -36 276 1 256 290 50 40 chr10 86008728 86008828 -54307937 - MER5A DNA MER1_type -25 164 64 361 255 183 7 chr10 86008866 86009019 -54307746 - MER5A DNA MER1_type -1 188 9 2513 57 0 0 chr10 86009565 86009861 -54306904 + AluY SINE Alu 1 296 -15 330 312 71 14 chr10 86009978 86010119 -54306646 + MIR3 SINE MIR 44 192 -16 181 80 0 0 chr10 86010368 86010393 -54306372 + MER5B DNA MER1_type 33 57 -121 301 167 17 0 chr10 86010394 86010454 -54306311 - MER5A DNA MER1_type -83 106 46 502 288 56 0 chr10 86010515 86010675 -54306090 + MER5B DNA MER1_type 10 178 0 188 298 18 0 chr10 86011133 86011190 -54305575 - L2 LINE L2 -5 3267 3210 324 70 0 0 chr10 86011725 86011768 -54304997 + (TG)n Simple_repeat Simple_repeat 1 43 0 254 161 0 18 chr10 86012801 86012857 -54303908 + CT-rich Low_complexity Low_complexity 2 56 0 2335 105 7 0 chr10 86012874 86013180 -54303585 - AluSx SINE Alu -4 308 1 307 276 55 55 chr10 86013801 86013928 -54302837 + MIR SINE MIR 135 261 -1 237 108 0 0 chr10 86014220 86014257 -54302508 + (A)n Simple_repeat Simple_repeat 1 37 0 225 282 194 0 chr10 86014742 86014866 -54301899 - L2 LINE L2 -1291 2023 1876 705 263 108 13 chr10 86015012 86015384 -54301381 + L1ME3A LINE L1 5538 5944 -226 580 291 214 5 chr10 86015642 86015848 -54300917 - MIR SINE MIR 0 262 14 420 252 54 0 chr10 86016014 86016125 -54300640 + MER94 DNA DNA 17 133 -1 28 48 0 0 chr10 86016368 86016410 -54300355 + AT_rich Low_complexity Low_complexity 1 42 0 5614 102 28 24 chr10 86018576 86019628 -54297137 - L1PA11 LINE L1 0 6174 5152 2180 125 0 0 chr10 86021084 86021409 -54295356 - AluSx SINE Alu 0 312 1 452 288 126 27 chr10 86022215 86022621 -54294144 + L1MC4a LINE L1 5444 5889 -1919 25 0 0 0 chr10 86022802 86022827 -54293938 + AT_rich Low_complexity Low_complexity 1 25 0 339 346 27 16 chr10 86023128 86023313 -54293452 + MER5A DNA MER1_type 3 189 0 190 228 114 38 chr10 86023588 86023667 -54293098 - MIR SINE MIR -155 107 23 225 256 186 23 chr10 86024395 86024524 -54292241 + MIR SINE MIR 51 200 -62 299 318 52 65 chr10 86025862 86026016 -54290749 + MLT1J LTR MaLR 65 216 -234 219 36 0 0 chr10 86026402 86026430 -54290335 + (A)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 86027288 86027308 -54289457 + (TA)n Simple_repeat Simple_repeat 2 21 0 660 122 24 0 chr10 86030018 86030141 -54286624 + (TCCA)n Simple_repeat Simple_repeat 1 126 0 4874 193 31 15 chr10 86030151 86031168 -54285597 - Tigger6a DNA MER2_type 0 1083 50 348 24 0 0 chr10 86032895 86032936 -54283829 + (TG)n Simple_repeat Simple_repeat 1 41 0 1054 234 91 23 chr10 86033837 86034179 -54282586 - MLT1A1 LTR MaLR 0 365 1 210 336 92 0 chr10 86034636 86034755 -54282010 - MIR SINE MIR -7 255 126 389 297 169 0 chr10 86034776 86034924 -54281841 - MER5A DNA MER1_type -2 187 15 1835 166 0 26 chr10 86034976 86035284 -54281481 - AluJo SINE Alu -12 300 1 258 255 33 0 chr10 86035609 86035826 -54280939 + (TA)n Simple_repeat Simple_repeat 1 224 0 336 328 67 32 chr10 86038165 86038359 -54278406 + MIR SINE MIR 17 212 -50 253 319 141 15 chr10 86038820 86038955 -54277810 - MIR SINE MIR -107 155 4 239 54 27 0 chr10 86038964 86039001 -54277764 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 426 297 29 81 chr10 86039553 86039799 -54276966 - L2 LINE L2 -246 3067 2835 2098 115 0 42 chr10 86039863 86040176 -54276589 - AluSx SINE Alu -12 300 1 238 229 0 0 chr10 86041031 86041079 -54275686 - MIR SINE MIR -63 145 98 402 341 35 6 chr10 86041790 86041960 -54274805 + MIR SINE MIR 9 183 -79 288 337 20 0 chr10 86042084 86042182 -54274583 - L2 LINE L2 -22 3291 3192 1830 120 78 0 chr10 86042197 86042455 -54274310 + AluSg SINE Alu 1 278 -32 695 108 9 0 chr10 86042455 86042566 -54274199 + (GAAA)n Simple_repeat Simple_repeat 1 112 0 203 0 37 0 chr10 86043032 86043059 -54273706 + (TA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr10 86043061 86043082 -54273683 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 22 56 0 0 chr10 86043762 86043798 -54272967 + AT_rich Low_complexity Low_complexity 1 36 0 1017 296 65 41 chr10 86044036 86044543 -54272222 - MLT1H1 LTR MaLR 0 555 37 408 105 0 0 chr10 86044618 86044675 -54272090 + Alu SINE Alu 1 57 -246 1028 198 63 41 chr10 86044771 86044851 -54271914 + L1MB7 LINE L1 5837 5914 -270 276 77 0 0 chr10 86044851 86044890 -54271875 + (TA)n Simple_repeat Simple_repeat 2 40 0 1028 198 63 41 chr10 86044890 86045127 -54271638 + L1MB7 LINE L1 5914 6161 -23 267 297 0 0 chr10 86045268 86045342 -54271423 + HsTC2 DNA Tc2 1825 1898 0 1159 138 6 0 chr10 86045436 86045603 -54271162 - AluSx SINE Alu -123 189 22 294 205 26 39 chr10 86045657 86045735 -54271030 + GA-rich Low_complexity Low_complexity 3 79 0 184 342 112 33 chr10 86046065 86046217 -54270548 + L2 LINE L2 3108 3271 -1 14464 138 19 12 chr10 86046654 86049053 -54267712 - Tigger1 DNA MER2_type -1 2417 2 1676 179 19 79 chr10 86049094 86049512 -54267253 - MLT2C1 LTR ERVL 0 397 5 360 348 101 14 chr10 86051184 86051409 -54265356 + MIR SINE MIR 12 255 -7 594 322 30 13 chr10 86051937 86052170 -54264595 - MIR SINE MIR -12 250 14 184 345 92 8 chr10 86052255 86052374 -54264391 - L2 LINE L2 -619 2695 2567 1347 201 18 14 chr10 86053007 86053286 -54263479 - AluJo SINE Alu -10 302 23 1462 264 87 11 chr10 86054985 86055538 -54261227 + L1ME1 LINE L1 5544 6138 -28 308 279 132 15 chr10 86056693 86056829 -54259936 + MER103 DNA DNA 6 157 -9 180 0 0 0 chr10 86057042 86057062 -54259703 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3884 217 38 16 chr10 86058045 86059837 -54256928 - L1MB7 LINE L1 0 6682 4857 2899 247 53 51 chr10 86059812 86060973 -54255792 - L1MCb LINE L1 -4875 1170 7 * 1694 162 0 60 chr10 86061006 86061359 -54255406 - AluJb SINE Alu 0 335 1 5285 239 33 44 chr10 86061359 86063426 -54253339 - L1MB7 LINE L1 -1763 4801 2757 226 305 70 0 chr10 86063620 86063748 -54253017 - L1MB7 LINE L1 -4491 2075 1939 4615 242 41 65 chr10 86063754 86064660 -54252105 - L1MB7 LINE L1 -4706 1860 934 2384 92 0 0 chr10 86064660 86064965 -54251800 - AluY SINE Alu -6 305 1 4615 242 41 65 chr10 86064965 86066009 -54250756 - L1MB7 LINE L1 -5632 934 -64 1305 172 90 4 chr10 86066627 86066883 -54249882 - L1MA4 LINE L1 -246 6054 5777 15671 130 9 1 chr10 86066883 86070180 -54246585 - L1PA8A LINE L1 0 6446 3142 528 105 0 0 chr10 86070180 86070256 -54246509 - Alu SINE Alu -2 310 235 10126 167 9 24 chr10 86070257 86073404 -54243361 - L1PA8A LINE L1 -3301 3160 3 32 43 0 0 chr10 86074092 86074138 -54242627 + AT_rich Low_complexity Low_complexity 1 46 0 334 250 0 0 chr10 86074139 86074219 -54242546 - L1M4 LINE L1 -2324 3822 3743 321 308 109 69 chr10 86074337 86074958 -54241807 - L1M4 LINE L1 -2459 3687 3042 425 354 80 56 chr10 86076596 86077009 -54239756 - L2 LINE L2 -3 3269 2847 279 0 0 0 chr10 86077193 86077224 -54239541 + (T)n Simple_repeat Simple_repeat 1 31 0 23 0 0 0 chr10 86077766 86077789 -54238976 + AT_rich Low_complexity Low_complexity 1 23 0 259 391 14 0 chr10 86077937 86078075 -54238690 - MIR SINE MIR -122 140 1 286 178 75 60 chr10 86078309 86078480 -54238285 + L1MC5 LINE L1 6970 7195 -766 2141 136 0 0 chr10 86078503 86078811 -54237954 - AluSx SINE Alu -4 308 1 24 0 0 0 chr10 86078900 86078924 -54237841 + AT_rich Low_complexity Low_complexity 1 24 0 203 364 73 36 chr10 86079915 86080135 -54236630 + L2 LINE L2 2344 2571 -743 227 337 30 10 chr10 86080476 86080577 -54236188 + L2 LINE L2 2985 3087 -185 3592 112 0 0 chr10 86080703 86081203 -54235562 + L1PA10 LINE L1 5652 6151 -17 866 146 8 0 chr10 86081711 86081834 -54234931 + FLAM_C SINE Alu 1 124 -9 199 322 184 0 chr10 86082824 86082911 -54233854 - L2 LINE L2 -14 3258 3156 189 229 67 86 chr10 86082966 86083071 -54233694 + L2 LINE L2 2323 2425 -889 245 304 0 0 chr10 86083173 86083265 -54233500 + (TA)n Simple_repeat Simple_repeat 1 92 0 330 269 10 29 chr10 86084514 86084618 -54232147 - MER103 DNA DNA -39 127 26 642 316 18 18 chr10 86085501 86085729 -54231036 - MIR SINE MIR -30 232 5 357 271 39 32 chr10 86087242 86087397 -54229368 - MLT1J2 LTR MaLR -248 202 47 223 256 178 16 chr10 86087455 86087584 -54229181 + MIR SINE MIR 59 208 -54 246 323 58 13 chr10 86088324 86088425 -54228340 - MIR SINE MIR -115 93 15 202 244 0 0 chr10 86088444 86088485 -54228280 + L2 LINE L2 3213 3253 -19 577 226 57 57 chr10 86089317 86089494 -54227271 - MIR SINE MIR -70 192 16 3246 150 54 23 chr10 86089597 86090023 -54226742 - Tigger3(Golem) DNA MER2_type -1 3027 2573 2458 56 0 13 chr10 86090023 86090326 -54226439 - AluY SINE Alu -12 299 1 3246 150 54 23 chr10 86090326 86090546 -54226219 - Tigger3(Golem) DNA MER2_type -455 2573 2361 1377 170 13 87 chr10 86090546 86090857 -54225908 - AluJo SINE Alu -6 306 19 605 98 0 22 chr10 86090858 86090950 -54225815 - Tigger3(Golem) DNA MER2_type -662 2367 2278 * 664 178 0 9 chr10 86090943 86091050 -54225715 - Tigger3(Golem) DNA MER2_type -2923 106 1 2363 134 0 40 chr10 86091611 86091962 -54224803 - MER1B DNA MER1_type 0 337 1 258 291 137 33 chr10 86093037 86093219 -54223546 + MIR SINE MIR 8 208 -54 407 357 0 24 chr10 86093821 86093947 -54222818 - L2 LINE L2 0 3272 3150 253 271 82 0 chr10 86094536 86094621 -54222144 + MIR SINE MIR 110 201 -61 274 242 236 38 chr10 86094689 86094846 -54221919 + MIR SINE MIR 59 246 -16 216 264 173 64 chr10 86095677 86095787 -54220978 + L2 LINE L2 3145 3266 -6 2322 88 0 0 chr10 86095884 86096192 -54220573 + AluSp SINE Alu 1 308 0 210 118 0 0 chr10 86096417 86096451 -54220314 + (TA)n Simple_repeat Simple_repeat 2 35 0 200 330 19 19 chr10 86096906 86097009 -54219756 - MIR SINE MIR -113 149 47 205 211 0 0 chr10 86098130 86098168 -54218597 - MIR SINE MIR -112 150 113 240 35 0 0 chr10 86101937 86101966 -54214799 + (TG)n Simple_repeat Simple_repeat 2 30 0 441 325 57 17 chr10 86102030 86102266 -54214499 - MIR SINE MIR -10 252 5 221 211 18 0 chr10 86102871 86102928 -54213837 + GA-rich Low_complexity Low_complexity 1 58 0 245 324 0 0 chr10 86103217 86103285 -54213480 + CT-rich Low_complexity Low_complexity 3 70 0 198 387 21 0 chr10 86103287 86103380 -54213385 - L2 LINE L2 -5 3267 3173 203 103 26 0 chr10 86103498 86103537 -54213228 + (TGG)n Simple_repeat Simple_repeat 3 42 0 197 218 10 158 chr10 86104344 86104445 -54212320 + MIR SINE MIR 66 151 -111 1770 183 45 15 chr10 86105085 86105418 -54211347 - MER61A LTR ERV1 0 343 1 1979 98 80 0 chr10 86105664 86105939 -54210826 + AluSq SINE Alu 1 297 -16 191 213 149 0 chr10 86105980 86106027 -54210738 - L2 LINE L2 0 3272 3219 246 32 0 0 chr10 86107494 86107525 -54209240 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 256 291 60 0 chr10 86107546 86107663 -54209102 + L1MB3 LINE L1 -176 4294967243 -6333 2953 226 23 28 chr10 86108106 86109025 -54207740 + L1MB3 LINE L1 805 1787 -4516 1505 237 44 20 chr10 86109051 86109548 -54207217 + L1MB3 LINE L1 3275 3783 -2599 * 4910 189 20 18 chr10 86109544 86110920 -54205845 + L1MB3 LINE L1 5042 6417 -2 270 239 84 14 chr10 86111501 86111572 -54205193 - MIR SINE MIR -182 80 5 3924 25 0 14 chr10 86112281 86112716 -54204049 - SVA Other Other 0 1386 958 302 277 78 21 chr10 86113180 86113321 -54203444 + MIR SINE MIR 37 185 -77 211 277 0 15 chr10 86113323 86113388 -54203377 + (CATA)n Simple_repeat Simple_repeat 3 66 0 1593 93 133 19 chr10 86113451 86113721 -54203044 + AluSg1 SINE Alu 1 301 -8 2279 91 0 3 chr10 86113721 86114029 -54202736 + AluY SINE Alu 1 308 -3 1012 255 32 25 chr10 86114108 86114422 -54202343 + L1MB7 LINE L1 5868 6183 -1 352 336 81 19 chr10 86114725 86114936 -54201829 - MLT1I LTR MaLR -177 232 9 2034 145 0 7 chr10 86115737 86116033 -54200732 + AluSx SINE Alu 1 294 -18 481 326 16 47 chr10 86116584 86116777 -54199988 + MER5A DNA MER1_type 1 187 -2 628 269 34 14 chr10 86118313 86118521 -54198244 + MIR SINE MIR 51 262 0 22 35 0 0 chr10 86118549 86118578 -54198187 + AT_rich Low_complexity Low_complexity 1 29 0 202 175 25 0 chr10 86118821 86118861 -54197904 + L3b LINE CR1 1529 1569 -14 320 363 39 0 chr10 86169479 86169661 -54147104 + MIR SINE MIR 74 262 0 306 303 155 21 chr10 86169669 86169811 -54146954 + MIR SINE MIR 8 168 -94 422 279 0 0 chr10 86169817 86169921 -54146844 + MER58A DNA MER1_type 3 106 -1 3969 99 17 29 chr10 86170456 86170826 -54145939 - L1PA10 LINE L1 -274 5894 5521 1501 145 5 0 chr10 86170826 86171047 -54145718 + AluSg/x SINE Alu 89 310 -2 3969 99 17 29 chr10 86171047 86171474 -54145291 - L1PA10 LINE L1 -647 5521 5107 1814 136 30 0 chr10 86171607 86171872 -54144893 + AluSx SINE Alu 1 273 -39 60 15 0 0 chr10 86173560 86173627 -54143138 + AT_rich Low_complexity Low_complexity 1 67 0 208 221 117 0 chr10 86173786 86173863 -54142902 + MIR SINE MIR 106 191 -71 35 24 0 0 chr10 86173901 86173943 -54142822 + AT_rich Low_complexity Low_complexity 1 42 0 225 333 29 0 chr10 86174488 86174557 -54142208 + MIR3 SINE MIR 85 155 -53 303 254 90 8 chr10 86174735 86174857 -54141908 + L1ME4a LINE L1 5990 6121 0 1976 184 29 0 chr10 86175429 86175805 -54140960 + MLT1B LTR MaLR 1 387 -3 1661 185 202 91 chr10 86175811 86176663 -54140102 - LTR28 LTR ERV1 -7 819 1 221 336 119 14 chr10 86177581 86177724 -54139041 - MIR SINE MIR -71 191 34 1221 242 40 7 chr10 86178424 86178721 -54138044 + Tigger5 DNA MER2_type 1 307 -2016 1077 188 0 28 chr10 86178725 86178943 -54137822 + Tigger5 DNA MER2_type 2112 2323 0 233 282 39 48 chr10 86179402 86179505 -54137260 - L2 LINE L2 0 3272 3171 329 244 23 107 chr10 86179605 86179736 -54137029 + L2 LINE L2 3194 3313 0 271 333 0 0 chr10 86179755 86179824 -54136941 + L2 LINE L2 3204 3272 0 21 0 0 0 chr10 86180095 86180116 -54136649 + AT_rich Low_complexity Low_complexity 1 21 0 2150 110 3 3 chr10 86181104 86181413 -54135352 - AluSg1 SINE Alu 0 309 1 269 356 8 0 chr10 86181759 86181877 -54134888 + CT-rich Low_complexity Low_complexity 3 121 0 228 211 0 0 chr10 86181927 86181998 -54134767 + (TG)n Simple_repeat Simple_repeat 1 71 0 428 287 0 7 chr10 86182156 86182299 -54134466 + L1MC4 LINE L1 6459 6600 -1442 1616 187 41 3 chr10 86182326 86182669 -54134096 + MLT1B LTR MaLR 34 389 -1 186 143 0 0 chr10 86182748 86182783 -54133982 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 1745 161 123 38 chr10 86182791 86183022 -54133743 - LTR2B LTR ERV1 0 490 280 186 43 0 0 chr10 86183022 86183045 -54133720 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1745 161 123 38 chr10 86183045 86183236 -54133529 - LTR2B LTR ERV1 -210 280 32 790 255 24 95 chr10 86183255 86183400 -54133365 + L1MC4 LINE L1 6611 6765 -1277 2568 64 0 0 chr10 86183400 86183727 -54133038 - L1PA8 LINE L1 -13 6159 5833 790 255 24 95 chr10 86183727 86183878 -54132887 + L1MC4 LINE L1 6765 6971 -1071 1194 235 149 17 chr10 86183982 86184196 -54132569 + L1MC4 LINE L1 7440 7624 -418 2170 122 0 0 chr10 86184196 86184492 -54132273 - AluSq SINE Alu -17 296 1 1194 235 149 17 chr10 86184492 86184685 -54132080 + L1MC4 LINE L1 7624 7901 -141 228 250 0 0 chr10 86184747 86184799 -54131966 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 312 319 49 49 chr10 86184926 86185130 -54131635 - MIR SINE MIR -36 226 23 242 28 0 28 chr10 86185610 86185646 -54131119 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2548 43 0 10 chr10 86186678 86186981 -54129784 - AluY SINE Alu -11 300 1 1621 64 83 0 chr10 86187084 86187302 -54129463 - AluY SINE Alu -10 301 66 970 94 7 31 chr10 86188670 86188943 -54127822 + (TG)n Simple_repeat Simple_repeat 2 447 0 539 292 21 47 chr10 86191109 86191301 -54125464 + MER5A DNA MER1_type 1 187 -2 198 306 41 27 chr10 86191353 86191548 -54125217 + MIR SINE MIR 2 259 -3 1939 145 10 0 chr10 86191877 86192167 -54124598 + AluSg SINE Alu 5 297 -13 1746 47 0 0 chr10 86192167 86192401 -54124364 + L1PA3 LINE L1 5939 6155 0 46 0 0 0 chr10 86192615 86192661 -54124104 + AT_rich Low_complexity Low_complexity 1 46 0 228 149 0 0 chr10 86193747 86193794 -54122971 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 7195 47 6 1 chr10 86193814 86194802 -54121963 + L1PA6 LINE L1 5162 6153 -1 30 27 0 0 chr10 86194802 86194839 -54121926 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr10 86195049 86195083 -54121682 + AT_rich Low_complexity Low_complexity 1 34 0 1992 223 135 13 chr10 86195682 86196238 -54120527 + MLT1E2 LTR MaLR 1 624 -2 1201 162 13 0 chr10 86197201 86197429 -54119336 + L1MA4 LINE L1 6069 6299 -1 694 236 169 0 chr10 86197429 86197624 -54119141 + L1MB1 LINE L1 5940 6167 -1 21 57 0 0 chr10 86197859 86197894 -54118871 + AT_rich Low_complexity Low_complexity 1 35 0 23 97 0 0 chr10 86197909 86197981 -54118784 + AT_rich Low_complexity Low_complexity 1 72 0 25 65 0 0 chr10 86198208 86198254 -54118511 + AT_rich Low_complexity Low_complexity 1 46 0 1422 239 61 30 chr10 86198271 86198795 -54117970 + MER114 LTR ERV 33 572 -76 22 0 0 0 chr10 86198997 86199019 -54117746 + AT_rich Low_complexity Low_complexity 1 22 0 336 335 161 13 chr10 86200904 86201208 -54115557 - L3 LINE CR1 -24 1553 1205 757 171 12 171 chr10 86201291 86201543 -54115222 + MER20 DNA MER1_type 1 212 -7 637 281 38 40 chr10 86202107 86202506 -54114259 - L1ME3A LINE L1 -232 5921 5524 511 245 119 60 chr10 86202683 86203018 -54113747 - L1ME3A LINE L1 -3647 2482 2128 213 235 29 20 chr10 86203069 86203171 -54113594 + T-rich Low_complexity Low_complexity 1 103 0 347 234 93 83 chr10 86203422 86203712 -54113053 - L1ME3A LINE L1 -5081 1038 746 3429 211 75 12 chr10 86205754 86206655 -54110110 + L1MB8 LINE L1 5207 6165 -13 229 191 16 0 chr10 86206655 86206718 -54110047 + MER53 DNA DNA 15 78 -111 1418 197 54 3 chr10 86206729 86207024 -54109741 + Tigger1 DNA MER2_type 1 310 -2108 4228 140 41 37 chr10 86207028 86207081 -54109684 + Tigger1 DNA MER2_type 1637 1688 -730 2281 98 0 3 chr10 86207081 86207386 -54109379 + AluSx SINE Alu 1 304 -8 4228 140 41 37 chr10 86207386 86207787 -54108978 + Tigger1 DNA MER2_type 1688 2098 -320 2300 62 10 0 chr10 86207787 86208078 -54108687 + AluY SINE Alu 1 294 -17 4228 140 41 37 chr10 86208078 86208401 -54108364 + Tigger1 DNA MER2_type 2098 2418 0 320 149 245 0 chr10 86208404 86208498 -54108267 - MER53 DNA DNA -72 117 1 254 322 69 0 chr10 86210992 86211079 -54105686 + L2 LINE L2 3192 3284 -29 429 81 0 0 chr10 86211721 86211783 -54104982 + (CA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr10 86212384 86212406 -54104359 + AT_rich Low_complexity Low_complexity 1 22 0 205 227 0 45 chr10 86214130 86214218 -54102547 + T-rich Low_complexity Low_complexity 1 84 0 498 322 12 42 chr10 86214241 86214520 -54102245 + L1ME LINE L1 5398 5637 -527 1946 150 9 81 chr10 86214585 86215006 -54101759 + L1P LINE L1 4544 4934 -1212 21 71 0 0 chr10 86215889 86215931 -54100834 + AT_rich Low_complexity Low_complexity 1 42 0 290 130 0 19 chr10 86216001 86216055 -54100710 + (TA)n Simple_repeat Simple_repeat 1 53 0 257 68 23 0 chr10 86216215 86216259 -54100506 + (TA)n Simple_repeat Simple_repeat 1 45 0 195 301 36 12 chr10 86216381 86216464 -54100301 - MIR SINE MIR -12 250 166 735 243 33 28 chr10 86219202 86219416 -54097349 - MIR SINE MIR -7 255 41 240 312 106 28 chr10 86220035 86220176 -54096589 + L3 LINE CR1 1154 1305 -272 348 311 65 60 chr10 86220835 86221083 -54095682 + L3 LINE CR1 1326 1574 -3 186 43 0 0 chr10 86221673 86221696 -54095069 + (T)n Simple_repeat Simple_repeat 1 23 0 1174 109 13 0 chr10 86221856 86222012 -54094753 + AluSq SINE Alu 138 295 -18 262 276 45 22 chr10 86222072 86222206 -54094559 - L1ME LINE L1 -267 5854 5718 28 0 0 0 chr10 86223108 86223136 -54093629 + AT_rich Low_complexity Low_complexity 1 28 0 2182 112 0 19 chr10 86223143 86223455 -54093310 + AluSq SINE Alu 1 306 -7 180 366 27 70 chr10 86223680 86223866 -54092899 + L2 LINE L2 2889 3066 -206 617 270 169 45 chr10 86224286 86224576 -54092189 - MLT1L LTR MaLR -125 490 71 984 256 192 20 chr10 86227384 86227547 -54089218 + L1MC4 LINE L1 6470 6604 -1438 282 29 0 0 chr10 86227547 86227582 -54089183 + (TG)n Simple_repeat Simple_repeat 2 36 0 984 256 192 20 chr10 86227582 86227808 -54088957 + L1MC4 LINE L1 6604 6926 -1116 * 1832 156 61 3 chr10 86227806 86228134 -54088631 - L1MA9 LINE L1 -377 5935 5589 231 146 0 0 chr10 86228136 86228191 -54088574 + (TG)n Simple_repeat Simple_repeat 2 56 0 948 248 55 19 chr10 86228193 86228503 -54088262 + L1MA9 LINE L1 5954 6274 -38 1749 237 69 54 chr10 86228519 86229345 -54087420 + L1MC4 LINE L1 6918 7903 -139 2291 101 0 0 chr10 86229969 86230266 -54086499 - AluSc SINE Alu -12 297 1 1544 191 92 3 chr10 86230444 86230779 -54085986 - MLT1A1 LTR MaLR 0 365 1 2632 64 11 6 chr10 86231087 86231446 -54085319 - L1PA13 LINE L1 -1 6162 5802 995 82 0 0 chr10 86231447 86231581 -54085184 + L1P4 LINE L1 5609 5742 -426 27 0 0 0 chr10 86231841 86231868 -54084897 + AT_rich Low_complexity Low_complexity 1 27 0 625 204 65 119 chr10 86232493 86232845 -54083920 + L1MC5 LINE L1 6729 7061 -900 1494 170 62 82 chr10 86232853 86233241 -54083524 - L1PB4 LINE L1 -4 6152 5773 1431 215 40 104 chr10 86233258 86233882 -54082883 + L1MC5 LINE L1 7085 7700 -261 208 200 22 0 chr10 86233882 86233927 -54082838 + (TA)n Simple_repeat Simple_repeat 1 46 0 1431 215 40 104 chr10 86233927 86234017 -54082748 + L1MC5 LINE L1 7700 7794 -167 32 26 0 0 chr10 86234063 86234102 -54082663 + AT_rich Low_complexity Low_complexity 1 39 0 2198 108 19 58 chr10 86234144 86234522 -54082243 + THE1B LTR MaLR 1 363 -1 266 250 62 78 chr10 86234844 86234884 -54081881 - HAL1 LINE L1 -1603 904 865 339 65 0 0 chr10 86234884 86234930 -54081835 + (CA)n Simple_repeat Simple_repeat 2 47 0 266 250 62 78 chr10 86234930 86235017 -54081748 - HAL1 LINE L1 -1642 865 779 441 276 107 64 chr10 86235040 86235471 -54081294 - HAL1 LINE L1 -1810 697 53 1546 200 91 13 chr10 86235472 86235867 -54080898 - LTR37A LTR ERV1 0 426 1 23 0 0 0 chr10 86236842 86236865 -54079900 + AT_rich Low_complexity Low_complexity 1 23 0 462 223 9 109 chr10 86237250 86237449 -54079316 - MER92B LTR ERV1 -370 184 1 660 234 103 63 chr10 86237563 86237958 -54078807 - MER67C LTR ERV1 0 543 233 9517 30 0 1 chr10 86238013 86239924 -54076841 - L1PA3 LINE L1 -3 6152 4242 2625 23 0 0 chr10 86239924 86240229 -54076536 + L1PA3 LINE L1 3934 4238 -1908 566 200 47 63 chr10 86240278 86240468 -54076297 - MER67B LTR ERV1 -340 321 135 192 40 0 0 chr10 86240470 86240495 -54076270 + (T)n Simple_repeat Simple_repeat 1 25 0 1119 195 53 65 chr10 86240602 86240788 -54075977 - MER67B LTR ERV1 -342 319 137 2196 102 58 0 chr10 86240788 86241081 -54075684 - AluSx SINE Alu -2 310 1 1119 195 53 65 chr10 86241081 86241217 -54075548 - MER67B LTR ERV1 -524 137 1 268 276 74 31 chr10 86242146 86242284 -54074481 - MER5B DNA MER1_type -42 146 1 1142 234 47 4 chr10 86242713 86242970 -54073795 + MLT1F1 LTR MaLR 105 372 -195 627 207 25 0 chr10 86242974 86243095 -54073670 + MER20 DNA MER1_type 7 130 -89 374 127 18 0 chr10 86243163 86243218 -54073547 + MLT1F1 LTR MaLR 367 422 -145 1246 206 123 132 chr10 86243220 86244114 -54072651 - LTR1B LTR ERV1 0 1020 1 686 186 41 14 chr10 86244114 86244257 -54072508 + MLT1F1 LTR MaLR 421 567 0 21 36 0 0 chr10 86246265 86246293 -54070472 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr10 86246368 86246395 -54070370 + AT_rich Low_complexity Low_complexity 1 27 0 301 285 108 33 chr10 86246944 86247158 -54069607 + L1ME3A LINE L1 5622 5851 -1957 264 122 0 0 chr10 86247612 86247653 -54069112 + (T)n Simple_repeat Simple_repeat 1 41 0 279 301 100 59 chr10 86248213 86248622 -54068143 + L2 LINE L2 2807 3232 -81 226 355 66 53 chr10 86248819 86248971 -54067794 - MER91A DNA MER1_type -7 189 36 1766 265 33 53 chr10 86249006 86250175 -54066590 + L1ME1 LINE L1 3286 6162 -4 1596 146 57 36 chr10 86250705 86251006 -54065759 + AluSx SINE Alu 1 307 -5 2341 115 0 0 chr10 86251243 86251556 -54065209 + AluSq SINE Alu 1 313 0 402 331 33 7 chr10 86252046 86252197 -54064568 + L1ME3A LINE L1 5796 5950 -220 312 204 39 10 chr10 86252394 86252406 -54064359 + (TA)n Simple_repeat Simple_repeat 2 12 -95 2042 124 55 0 chr10 86252406 86252697 -54064068 + AluSg SINE Alu 1 307 -3 312 204 39 10 chr10 86252697 86252787 -54063978 + (TA)n Simple_repeat Simple_repeat 12 107 0 211 306 71 10 chr10 86253995 86254093 -54062672 - L2 LINE L2 0 3313 3210 466 285 66 26 chr10 86254096 86254247 -54062518 + LTR33 LTR ERVL 19 175 -346 339 333 8 0 chr10 86254389 86254509 -54062256 + LTR33 LTR ERVL 400 520 -1 223 283 19 0 chr10 86254876 86254929 -54061836 - L2 LINE L2 -233 3039 2986 219 338 68 39 chr10 86254988 86255195 -54061570 - L2 LINE L2 -337 2977 2765 574 146 19 0 chr10 86255643 86255746 -54061019 + L1PA13 LINE L1 6055 6159 -4 272 274 16 0 chr10 86256170 86256232 -54060533 - MER94 DNA DNA 0 134 72 308 274 49 0 chr10 86258355 86258457 -54058308 + GA-rich Low_complexity Low_complexity 2 108 0 1963 133 3 7 chr10 86258705 86259007 -54057758 - AluSg SINE Alu -9 301 1 226 266 32 40 chr10 86259322 86259459 -54057306 - MIR SINE MIR -88 174 40 225 326 31 107 chr10 86261239 86261435 -54055330 + L2 LINE L2 3042 3222 -50 326 297 55 41 chr10 86262246 86262391 -54054374 - MIR SINE MIR -96 166 20 25 0 0 0 chr10 86262454 86262479 -54054286 + AT_rich Low_complexity Low_complexity 1 25 0 763 301 43 69 chr10 86262969 86263719 -54053046 - L2 LINE L2 0 3313 2597 289 331 80 34 chr10 86263795 86264058 -54052707 + L2 LINE L2 2210 2484 -830 259 308 152 43 chr10 86264365 86264641 -54052124 - L2 LINE L2 -564 2750 2445 309 326 30 15 chr10 86266386 86266518 -54050247 - L3 LINE CR1 -1 1576 1443 3817 178 20 18 chr10 86266746 86267370 -54049395 + L1MA9 LINE L1 5164 5797 -515 222 37 0 0 chr10 86267370 86267397 -54049368 + (CA)n Simple_repeat Simple_repeat 1 27 0 3817 178 20 18 chr10 86267397 86267603 -54049162 + L1MA9 LINE L1 5797 6001 -311 385 373 21 33 chr10 86268044 86268285 -54048480 + L1MC/D LINE L1 5544 5781 -2027 279 0 0 0 chr10 86269131 86269162 -54047603 + (TG)n Simple_repeat Simple_repeat 2 32 0 337 231 108 54 chr10 86269224 86269354 -54047411 + MER69A DNA AcHobo 8 144 -33 2299 92 13 7 chr10 86269739 86270044 -54046721 + AluSg SINE Alu 1 307 -3 243 152 0 0 chr10 86270470 86270516 -54046249 + (CA)n Simple_repeat Simple_repeat 1 46 0 2706 106 24 0 chr10 86270736 86271331 -54045434 - L1PA10 LINE L1 -528 5640 5037 * 3672 87 2 0 chr10 86271326 86271809 -54044956 + L1PA10 LINE L1 5638 6121 -47 304 343 40 40 chr10 86272193 86272368 -54044397 + MIR3 SINE MIR 30 204 -4 2456 219 113 31 chr10 86273041 86274333 -54042432 + L1MC2 LINE L1 1277 2643 -3572 1842 211 33 91 chr10 86274360 86274911 -54041854 - LTR26E LTR ERV1 -12 610 1 3599 260 85 47 chr10 86274918 86276674 -54040091 + L1MC2 LINE L1 2659 4480 -1735 998 201 5 0 chr10 86276705 86276919 -54039846 - L1M4 LINE L1 -1216 4930 4716 3417 186 51 1 chr10 86276921 86277610 -54039155 + L1MC2 LINE L1 5689 6411 -2 350 240 42 0 chr10 86278761 86278857 -54037908 - MIR SINE MIR -4 258 159 30 0 0 0 chr10 86278999 86279029 -54037736 + AT_rich Low_complexity Low_complexity 1 30 0 892 236 0 0 chr10 86279379 86279557 -54037208 - AluJo SINE Alu -1 311 134 330 139 0 0 chr10 86279558 86279630 -54037135 + (TA)n Simple_repeat Simple_repeat 1 72 0 757 148 0 31 chr10 86279631 86279759 -54037006 - AluJo SINE Alu -174 128 5 287 310 52 42 chr10 86279874 86280123 -54036642 + L1MC/D LINE L1 5485 5737 -384 2943 161 4 8 chr10 86280202 86280710 -54036055 + L1PA16 LINE L1 5661 6166 0 2076 120 7 0 chr10 86280723 86281007 -54035758 + AluSg SINE Alu 1 286 -24 288 111 0 0 chr10 86281631 86281676 -54035089 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1898 123 4 11 chr10 86281680 86281957 -54034808 - AluSx SINE Alu -37 275 1 255 288 210 26 chr10 86282053 86282282 -54034483 + L2 LINE L2 1300 1570 -1744 595 307 62 77 chr10 86282291 86282413 -54034352 + L2 LINE L2 1718 1840 -1474 2303 113 0 0 chr10 86282413 86282722 -54034043 - AluSx SINE Alu -3 309 1 595 307 62 77 chr10 86282722 86282987 -54033778 + L2 LINE L2 1840 2099 -1215 21 71 0 0 chr10 86283305 86283347 -54033418 + AT_rich Low_complexity Low_complexity 1 42 0 2272 88 0 0 chr10 86283554 86283848 -54032917 - AluSc SINE Alu -15 294 1 2169 96 3 7 chr10 86285692 86285984 -54030781 - AluSc SINE Alu -18 291 1 808 165 0 0 chr10 86286367 86286500 -54030265 + FLAM_C SINE Alu 1 133 0 225 247 35 0 chr10 86287631 86287716 -54029049 + (TA)n Simple_repeat Simple_repeat 1 88 0 455 294 68 11 chr10 86287831 86288008 -54028757 - MIR SINE MIR -41 221 35 836 278 35 52 chr10 86288971 86289374 -54027391 + MLT1J1 LTR MaLR 18 413 -33 317 261 113 9 chr10 86289787 86289902 -54026863 + MIR SINE MIR 81 207 -55 245 146 37 131 chr10 86290895 86291007 -54025758 - MER5A DNA MER1_type -85 104 6 2341 124 76 37 chr10 86292617 86292688 -54024077 - MSTB LTR MaLR 0 426 359 2332 81 3 0 chr10 86292688 86292985 -54023780 + AluY SINE Alu 1 298 -13 2341 124 76 37 chr10 86292985 86293323 -54023442 - MSTB LTR MaLR -67 359 1 1847 210 51 24 chr10 86293985 86294494 -54022271 - Charlie1b DNA MER1_type 0 523 1 642 282 127 9 chr10 86294834 86295054 -54021711 - MIR SINE MIR -11 251 6 933 105 7 33 chr10 86295241 86295393 -54021372 - L1PA16 LINE L1 0 6166 6019 193 265 48 24 chr10 86295740 86295823 -54020942 - MIR SINE MIR -97 165 81 240 35 0 0 chr10 86296495 86296524 -54020241 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1986 142 3 0 chr10 86297105 86297400 -54019365 + AluSx SINE Alu 1 296 -16 660 271 93 0 chr10 86297660 86297811 -54018954 - MER45A DNA AcHobo -3 175 11 190 184 0 0 chr10 86298651 86298689 -54018076 + MIR SINE MIR 181 218 -44 227 208 135 42 chr10 86299122 86299218 -54017547 - L2 LINE L2 0 3272 3168 241 324 0 14 chr10 86299647 86299718 -54017047 - L2 LINE L2 -19 3253 3184 193 324 14 14 chr10 86300559 86300630 -54016135 - L2 LINE L2 0 3313 3243 374 0 22 0 chr10 86301128 86301174 -54015591 + (CA)n Simple_repeat Simple_repeat 2 48 0 646 228 5 27 chr10 86301871 86302055 -54014710 + L1MC2 LINE L1 4914 5093 -1053 951 191 12 63 chr10 86302061 86302313 -54014452 - L1MB3 LINE L1 -1 6182 5944 4973 174 56 20 chr10 86302389 86302893 -54013872 + L1MC2 LINE L1 5149 5634 -710 243 0 0 0 chr10 86302893 86302920 -54013845 + (CA)n Simple_repeat Simple_repeat 2 28 0 4973 174 56 20 chr10 86302920 86303572 -54013193 + L1MC2 LINE L1 5634 6343 -1 513 129 59 0 chr10 86303685 86303786 -54012979 - MER2 DNA MER2_type -134 211 105 213 114 29 0 chr10 86304017 86304052 -54012713 + CT-rich Low_complexity Low_complexity 3 38 0 2438 152 29 55 chr10 86304172 86304697 -54012068 - L1MA8 LINE L1 -12 6279 5769 2713 128 27 8 chr10 86304697 86305167 -54011598 - L1MA4 LINE L1 0 6300 5815 368 111 2 0 chr10 86305270 86305329 -54011436 - L1MB3 LINE L1 -571 5603 5544 345 331 46 46 chr10 86307546 86307875 -54008890 - L1MC/D LINE L1 -2000 5808 5480 335 349 61 15 chr10 86308732 86308864 -54007901 - L2 LINE L2 -1 3271 3134 418 332 168 31 chr10 86308947 86309565 -54007200 - L2 LINE L2 -463 2851 2149 347 369 0 23 chr10 86309867 86309997 -54006768 - MIR SINE MIR -65 143 17 438 287 22 15 chr10 86310660 86310796 -54005969 + MLT1I LTR MaLR 69 205 -204 231 243 100 0 chr10 86311210 86311280 -54005485 - MIR SINE MIR -102 160 84 310 268 43 55 chr10 86312201 86312365 -54004400 + MLT1J2 LTR MaLR 266 427 -23 25 51 0 0 chr10 86312446 86312485 -54004280 + AT_rich Low_complexity Low_complexity 1 39 0 31 26 0 0 chr10 86312682 86312720 -54004045 + AT_rich Low_complexity Low_complexity 1 38 0 506 296 86 34 chr10 86313109 86313342 -54003423 - MIR SINE MIR 0 262 18 1010 124 57 0 chr10 86315439 86315616 -54001149 + L1MA7 LINE L1 6075 6261 -30 30 27 0 0 chr10 86315668 86315705 -54001060 + AT_rich Low_complexity Low_complexity 1 37 0 382 216 102 80 chr10 86316483 86316659 -54000106 + MLT1J2 LTR MaLR 269 448 -2 196 200 0 0 chr10 86317069 86317104 -53999661 - MIR SINE MIR -12 250 216 181 375 31 31 chr10 86317283 86317443 -53999322 + L2 LINE L2 2699 2858 -456 1569 172 0 4 chr10 86317630 86317891 -53998874 - AluSq SINE Alu -53 260 1 463 307 181 42 chr10 86318133 86319072 -53997693 + L1M4 LINE L1 3589 4658 -1488 910 294 116 6 chr10 86319686 86320040 -53996725 + LTR16B LTR ERVL 66 458 -6 280 274 65 32 chr10 86320170 86320356 -53996409 + L1ME4a LINE L1 5926 6117 -4 666 229 154 0 chr10 86321344 86321532 -53995233 + MIR SINE MIR 25 241 -21 6032 91 18 1 chr10 86321612 86322606 -53994159 + L1PA14 LINE L1 5129 6144 -17 1157 318 103 40 chr10 86322930 86323989 -53992776 - L2 LINE L2 -1084 2230 1105 1123 167 23 0 chr10 86324689 86324904 -53991861 - L1MA6 LINE L1 -1 6299 6080 282 29 0 0 chr10 86326058 86326093 -53990672 + (TG)n Simple_repeat Simple_repeat 1 35 0 238 312 28 83 chr10 86326241 86326350 -53990415 + MIR SINE MIR 47 149 -113 295 329 129 7 chr10 86326472 86326627 -53990138 + MIR SINE MIR 47 220 -42 954 188 61 73 chr10 86326678 86327008 -53989757 + L1MC5 LINE L1 6882 7207 -754 256 203 44 95 chr10 86327077 86327235 -53989530 + L1MC5 LINE L1 7392 7541 -420 27 49 0 0 chr10 86327497 86327538 -53989227 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr10 86328870 86328902 -53987863 + AT_rich Low_complexity Low_complexity 1 32 0 221 295 74 32 chr10 86328948 86329043 -53987722 - L2 LINE L2 -16 3256 3158 376 320 126 31 chr10 86329887 86330109 -53986656 - MIR SINE MIR -19 243 1 27 0 0 0 chr10 86330339 86330366 -53986399 + AT_rich Low_complexity Low_complexity 1 27 0 318 50 0 0 chr10 86330547 86330587 -53986178 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr10 86331052 86331072 -53985693 + (A)n Simple_repeat Simple_repeat 1 20 0 186 240 0 0 chr10 86331444 86331494 -53985271 + (TA)n Simple_repeat Simple_repeat 2 51 0 256 223 0 64 chr10 86331495 86331589 -53985176 - L1MC4 LINE L1 -1340 6702 6615 180 111 0 0 chr10 86331602 86331629 -53985136 + (TA)n Simple_repeat Simple_repeat 1 27 0 243 174 41 102 chr10 86331631 86331729 -53985036 - L1MC4 LINE L1 -1336 6706 6615 * 257 195 106 106 chr10 86331692 86331815 -53984950 + L1MC4 LINE L1 6614 6736 -1306 206 229 0 21 chr10 86332134 86332182 -53984583 + CT-rich Low_complexity Low_complexity 1 47 0 214 348 0 34 chr10 86332608 86332697 -53984068 - MIR SINE MIR -116 146 61 30 0 0 0 chr10 86383101 86383131 -53933634 + AT_rich Low_complexity Low_complexity 1 30 0 392 276 30 8 chr10 86383151 86383285 -53933480 - L1M4 LINE L1 -2250 3896 3760 1712 183 0 7 chr10 86383523 86383849 -53932916 + AluJo SINE Alu 1 324 0 25 0 0 0 chr10 86383851 86383876 -53932889 + AT_rich Low_complexity Low_complexity 1 25 0 411 261 86 90 chr10 86383901 86384549 -53932216 + L1MC1 LINE L1 2291 2937 -3209 2162 112 7 0 chr10 86384549 86384843 -53931922 + AluSc SINE Alu 1 296 -13 411 261 86 90 chr10 86384843 86384940 -53931825 + L1MC1 LINE L1 2937 3033 -3113 3314 183 90 0 chr10 86385554 86386388 -53930377 + L1MC1 LINE L1 5073 5974 -359 2440 69 0 3 chr10 86386388 86386691 -53930074 + AluY SINE Alu 1 302 -9 261 194 0 45 chr10 86386927 86386994 -53929771 - L3 LINE CR1 -190 1387 1324 260 269 90 13 chr10 86389304 86389460 -53927305 - L1M4 LINE L1 -2229 3917 3750 325 306 60 38 chr10 86389461 86389644 -53927121 - L1M4 LINE L1 -2452 3694 3508 451 268 88 79 chr10 86389665 86389927 -53926838 - L1M4 LINE L1 -2937 3209 2951 2177 109 7 0 chr10 86389927 86390221 -53926544 - AluSc SINE Alu -13 296 1 451 268 88 79 chr10 86390221 86390869 -53925896 - L1M4 LINE L1 -3195 2951 2291 25 0 0 0 chr10 86390894 86390919 -53925846 + AT_rich Low_complexity Low_complexity 1 25 0 1703 183 0 7 chr10 86390921 86391247 -53925518 - AluJo SINE Alu 0 324 1 1138 298 65 18 chr10 86391485 86392207 -53924558 + L1ME3A LINE L1 3760 4515 -1631 208 147 0 0 chr10 86392240 86392274 -53924491 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 347 266 21 55 chr10 86392371 86392608 -53924157 + L1ME3A LINE L1 4527 4755 -1391 521 261 123 84 chr10 86392643 86393141 -53923624 + L1ME3A LINE L1 5292 5808 -362 322 306 54 54 chr10 86393253 86393439 -53923326 + L1ME3A LINE L1 5977 6162 -8 1339 286 105 18 chr10 86394114 86395065 -53921700 + L2 LINE L2 2281 3313 0 320 262 24 32 chr10 86395179 86395305 -53921460 - MER103 DNA DNA -41 125 1 224 321 151 0 chr10 86395847 86395953 -53920812 + MIR SINE MIR 120 241 -21 195 329 53 0 chr10 86396383 86396459 -53920306 - L2 LINE L2 0 3272 3193 1928 136 20 0 chr10 86397462 86397764 -53919001 + AluSx SINE Alu 1 308 -4 828 103 0 0 chr10 86397766 86397882 -53918883 + AluSq/x SINE Alu 1 116 -197 209 303 144 48 chr10 86399847 86400035 -53916730 + L3 LINE CR1 1086 1291 -286 349 268 102 31 chr10 86400100 86400227 -53916538 - MIR SINE MIR -104 158 23 21 36 0 0 chr10 86400318 86400346 -53916419 + AT_rich Low_complexity Low_complexity 1 28 0 267 309 41 10 chr10 86400919 86401016 -53915749 + MLT1E LTR MaLR 53 152 -441 213 139 0 0 chr10 86401888 86401931 -53914834 + (CATA)n Simple_repeat Simple_repeat 2 44 0 597 220 85 17 chr10 86402753 86402930 -53913835 - MER53 DNA DNA 0 189 1 207 0 0 0 chr10 86403646 86403669 -53913096 + (A)n Simple_repeat Simple_repeat 1 23 0 2398 50 0 13 chr10 86403852 86404151 -53912614 + AluY SINE Alu 1 295 -16 378 322 157 26 chr10 86404360 86404849 -53911916 - L2 LINE L2 -9 3304 2700 2184 92 19 41 chr10 86405930 86406245 -53910520 + AluSq SINE Alu 1 308 -5 192 319 134 25 chr10 86406245 86406364 -53910401 + L2 LINE L2 3136 3267 -5 2058 124 13 3 chr10 86406569 86406875 -53909890 - AluSq SINE Alu -4 309 1 1558 213 3 3 chr10 86407959 86408260 -53908505 + AluJb SINE Alu 1 301 -11 286 329 56 19 chr10 86408820 86408981 -53907784 + MIR SINE MIR 25 191 -71 22 94 0 0 chr10 86409600 86409664 -53907101 + AT_rich Low_complexity Low_complexity 1 64 0 230 324 0 14 chr10 86410807 86410878 -53905887 + L2 LINE L2 3014 3083 -189 5409 221 53 5 chr10 86411369 86413449 -53903316 + L1MC1 LINE L1 3804 5974 -359 1219 44 0 0 chr10 86413449 86413586 -53903179 + AluY SINE Alu 1 137 -174 2099 197 55 18 chr10 86413586 86413709 -53903056 + L1MC1 LINE L1 5828 5945 -388 2291 67 0 3 chr10 86413709 86414064 -53902701 + AluY SINE Alu 1 354 0 2099 197 55 18 chr10 86414064 86414427 -53902338 + L1MC1 LINE L1 5945 6333 0 2272 107 3 0 chr10 86414635 86414935 -53901830 + AluSx SINE Alu 1 301 -11 234 368 107 17 chr10 86415842 86416076 -53900689 + L2 LINE L2 225 479 -2835 594 292 113 68 chr10 86416141 86416566 -53900199 + MLT1J2 LTR MaLR 2 445 -5 411 390 138 13 chr10 86416566 86417089 -53899676 + L2 LINE L2 565 1152 -2162 341 261 243 0 chr10 86417814 86417925 -53898840 - MIR SINE MIR -14 248 111 192 313 31 16 chr10 86418724 86418788 -53897977 - MIR SINE MIR -59 149 85 290 215 0 0 chr10 86419308 86419373 -53897392 - L1MB4 LINE L1 -17 6163 6099 329 47 0 0 chr10 86419373 86419416 -53897349 + MADE1 DNA Mariner 1 43 -37 626 216 26 1 chr10 86419422 86419599 -53897166 - L1MB4 LINE L1 -80 6100 5923 6623 61 5 2 chr10 86419920 86420796 -53895969 + L1PA8 LINE L1 5306 6172 0 1004 99 119 0 chr10 86421108 86421259 -53895506 + THE1B LTR MaLR 196 364 0 25 75 0 0 chr10 86421384 86421437 -53895328 + AT_rich Low_complexity Low_complexity 1 53 0 4699 71 3 3 chr10 86422694 86423336 -53893429 + L1PA8 LINE L1 5542 6172 0 469 289 89 17 chr10 86423530 86423765 -53893000 - LTR43 LTR ERV1 -158 444 193 26 0 0 0 chr10 86424867 86424893 -53891872 + AT_rich Low_complexity Low_complexity 1 26 0 214 184 0 0 chr10 86424953 86424991 -53891774 + CT-rich Low_complexity Low_complexity 2 39 0 243 61 0 0 chr10 86425000 86425033 -53891732 + (CA)n Simple_repeat Simple_repeat 2 34 0 476 294 166 5 chr10 86425524 86425711 -53891054 - MIR SINE MIR -10 252 36 1128 146 111 0 chr10 86426285 86426511 -53890254 - L1MA8 LINE L1 -4 6287 6037 2560 47 0 3 chr10 86426919 86427218 -53889547 + AluY SINE Alu 1 298 -13 261 194 0 45 chr10 86427454 86427521 -53889244 - L3 LINE CR1 -190 1387 1324 2326 102 3 6 chr10 86429384 86429697 -53887068 - AluSx SINE Alu 0 312 1 287 363 0 0 chr10 86429841 86429954 -53886811 + L2 LINE L2 3200 3312 -1 1864 155 7 10 chr10 86430462 86430753 -53886012 + AluJb SINE Alu 1 290 -22 3514 191 4 11 chr10 86432163 86432915 -53883850 + L1 LINE L1 3954 4700 -1446 247 200 0 0 chr10 86433602 86433647 -53883118 - MIR SINE MIR -66 142 98 1738 88 0 12 chr10 86433692 86433942 -53882823 - L1PA8 LINE L1 -8 6164 5918 477 271 108 38 chr10 86435018 86435258 -53881507 - MIR SINE MIR 0 262 6 1017 265 70 47 chr10 86436082 86436715 -53880050 + L2 LINE L2 2563 3222 -91 2135 188 29 5 chr10 86436720 86437135 -53879630 - MLT1C LTR MaLR 0 467 43 2652 101 3 11 chr10 86437135 86437502 -53879263 - THE1B LTR MaLR 0 364 1 2764 110 2 5 chr10 86437502 86437901 -53878864 - THE1B-int LTR MaLR 0 1580 1183 364 267 69 35 chr10 86437928 86438044 -53878721 + L2 LINE L2 3193 3312 -1 193 297 54 40 chr10 86438229 86438303 -53878462 - L2 LINE L2 -10 3303 3229 331 260 110 34 chr10 86438615 86438761 -53878004 + MIR SINE MIR 49 205 -57 979 235 14 5 chr10 86439948 86440161 -53876604 + MER74A LTR ERVL 1 215 -343 339 167 0 0 chr10 86440155 86440209 -53876556 + MER74B LTR ERVL 538 591 -31 * 24 53 0 0 chr10 86440283 86440321 -53876444 + AT_rich Low_complexity Low_complexity 1 38 0 243 0 0 0 chr10 86440827 86440854 -53875911 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 345 301 7 35 chr10 86441077 86441220 -53875545 + GA-rich Low_complexity Low_complexity 1 139 0 239 242 32 0 chr10 86442110 86442172 -53874593 - MIR SINE MIR -95 167 104 259 302 9 66 chr10 86442623 86442729 -53874036 - MIR SINE MIR -139 123 24 2043 117 27 0 chr10 86444185 86444483 -53872282 - AluSx SINE Alu 0 312 7 713 204 173 0 chr10 86445281 86445443 -53871322 + MER58A DNA MER1_type 4 193 -31 6717 64 16 0 chr10 86445503 86446733 -53870032 + L1PA7 LINE L1 4906 6148 -6 21 0 0 0 chr10 86446770 86446791 -53869974 + AT_rich Low_complexity Low_complexity 1 21 0 1059 226 69 33 chr10 86447709 86448041 -53868724 + MER2 DNA MER2_type 1 344 0 512 254 214 15 chr10 86448600 86448801 -53867964 - MIR SINE MIR -10 252 12 308 321 75 46 chr10 86448889 86449120 -53867645 + MIR SINE MIR 9 248 -14 1706 107 48 4 chr10 86449981 86450233 -53866532 - AluSx SINE Alu -7 305 43 382 335 97 57 chr10 86450509 86451331 -53865434 - L2 LINE L2 0 3272 2305 6553 190 42 32 chr10 86452481 86453970 -53862795 - L1MC3 LINE L1 -10 7775 6272 417 280 38 8 chr10 86453963 86454095 -53862670 - L1MCa LINE L1 -6284 142 7 * 429 20 0 0 chr10 86454977 86455027 -53861738 + (CA)n Simple_repeat Simple_repeat 2 51 0 323 208 26 0 chr10 86455139 86455216 -53861549 - MER53 DNA DNA 0 189 111 331 330 63 28 chr10 86455582 86455831 -53860934 - MIR SINE MIR -4 258 3 306 195 0 0 chr10 86456040 86456117 -53860648 + (TA)n Simple_repeat Simple_repeat 1 77 0 253 105 0 0 chr10 86456117 86456155 -53860610 + (CA)n Simple_repeat Simple_repeat 1 38 0 2050 116 39 0 chr10 86457174 86457459 -53859306 + AluSx SINE Alu 1 296 -16 1545 225 3 3 chr10 86457625 86457918 -53858847 - AluJo SINE Alu -17 295 3 3125 223 53 56 chr10 86458745 86460769 -53855996 + L1MCb LINE L1 1 2105 -4459 260 206 41 0 chr10 86460773 86460846 -53855919 + L1MCb LINE L1 2181 2256 -4308 2299 77 3 13 chr10 86460847 86461146 -53855619 - AluY SINE Alu -15 296 1 2283 154 61 0 chr10 86462039 86462434 -53854331 - MSTA LTR MaLR 0 428 10 537 310 31 26 chr10 86462727 86462922 -53853843 - MIR SINE MIR -21 241 46 1641 217 56 23 chr10 86463258 86464312 -53852453 + L1MCb LINE L1 2772 3933 -2631 392 312 82 0 chr10 86464305 86464475 -53852290 + L1M4 LINE L1 5054 5237 -909 * 9995 146 20 9 chr10 86464743 86466368 -53850397 - Tigger4(Zombi) DNA MER2_type -1089 1642 1 186 259 0 37 chr10 86467926 86467980 -53848785 + L2 LINE L2 3261 3312 -1 1530 109 41 0 chr10 86471380 86471601 -53845164 + MER30 DNA MER1_type 1 230 0 1326 167 28 8 chr10 86471824 86472075 -53844690 - Tigger2 DNA MER2_type 0 2718 2463 4231 151 19 11 chr10 86472141 86472858 -53843907 - Tigger2 DNA MER2_type -1974 744 22 599 144 10 0 chr10 86472864 86472961 -53843804 - Tigger2 DNA MER2_type -2619 99 2 235 203 31 16 chr10 86472961 86473025 -53843740 + (CATATA)n Simple_repeat Simple_repeat 4 68 0 788 201 67 58 chr10 86473255 86473578 -53843187 + LTR24B LTR ERV1 220 464 -3 537 310 31 26 chr10 86475038 86475233 -53841532 + MIR SINE MIR 46 241 -21 2348 154 55 0 chr10 86475526 86475923 -53840842 + MSTA LTR MaLR 10 428 0 2117 92 41 3 chr10 86476816 86477110 -53839655 + AluY SINE Alu 1 305 -6 228 273 0 0 chr10 86477133 86477188 -53839577 - Zaphod DNA AcHobo 0 4031 3977 373 316 12 53 chr10 86477294 86477465 -53839300 - MER115 DNA AcHobo -389 304 141 782 263 142 0 chr10 86477514 86477761 -53839004 - LTR16C LTR ERVL -62 429 148 2118 107 0 4 chr10 86478006 86478287 -53838478 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr10 86478288 86478308 -53838457 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 281 333 18 0 chr10 86479824 86479938 -53836827 - MIR SINE MIR -22 240 125 2369 66 0 20 chr10 86480038 86480343 -53836422 + AluY SINE Alu 5 303 -8 471 279 34 39 chr10 86480640 86480848 -53835917 + MLT1J LTR MaLR 303 509 -2 199 293 15 19 chr10 86481709 86481847 -53834918 + MER5A DNA MER1_type 1 188 -1 2183 126 0 0 chr10 86482558 86482867 -53833898 - AluSx SINE Alu -3 309 1 327 328 56 8 chr10 86483160 86483285 -53833480 - MIR SINE MIR -109 153 23 506 333 64 41 chr10 86483667 86484154 -53832611 - L1M4 LINE L1 -3519 2627 2130 935 226 59 30 chr10 86484225 86484575 -53832190 - MSTD LTR MaLR 0 396 1 1183 180 67 8 chr10 86484611 86484850 -53831915 + MER44D DNA MER2_type 1 523 -86 821 200 0 17 chr10 86484851 86485026 -53831739 + FRAM SINE Alu 1 169 -7 377 259 12 0 chr10 86485027 86485108 -53831657 + MER44D DNA MER2_type 528 609 0 218 240 40 0 chr10 86485114 86485164 -53831601 - L2 LINE L2 -49 3264 3213 484 266 51 25 chr10 86485167 86485325 -53831440 + MLT1J2 LTR MaLR 5 166 -284 1610 131 0 0 chr10 86485489 86485711 -53831054 - AluSx SINE Alu -31 281 60 2002 168 5 13 chr10 86485916 86486270 -53830495 + MLT2C1 LTR ERVL 1 462 -51 1536 246 30 24 chr10 86486392 86486855 -53829910 - MLT1C LTR MaLR -1 466 1 236 303 73 37 chr10 86486903 86487012 -53829753 + MLT1J2 LTR MaLR 134 246 -204 312 156 104 13 chr10 86487042 86487119 -53829646 + MLT1I LTR MaLR 298 381 -28 241 195 61 73 chr10 86487251 86487333 -53829432 - MER104 DNA Tc2 -81 99 19 291 240 78 95 chr10 86487351 86487530 -53829235 - L2 LINE L2 -174 3139 2964 994 250 16 8 chr10 86487605 86487861 -53828904 + L1MC4a LINE L1 6358 6615 -1193 21 36 0 0 chr10 86488072 86488100 -53828665 + AT_rich Low_complexity Low_complexity 1 28 0 1962 127 81 35 chr10 86488601 86488947 -53827818 + THE1B LTR MaLR 3 364 0 25 75 0 0 chr10 86489073 86489126 -53827639 + AT_rich Low_complexity Low_complexity 1 53 0 4880 45 2 15 chr10 86490383 86491000 -53825765 + L1PA4 LINE L1 5542 6150 -5 193 29 29 29 chr10 86491005 86491040 -53825725 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 583 146 0 9 chr10 86491043 86491153 -53825612 + MER2 DNA MER2_type 85 193 -152 1506 196 60 6 chr10 86491459 86491776 -53824989 - MER58B DNA MER1_type -4 337 4 315 0 0 0 chr10 86494902 86494937 -53821828 + (CA)n Simple_repeat Simple_repeat 2 36 0 381 227 111 82 chr10 86494959 86495302 -53821463 - L1ME4a LINE L1 -233 5888 5536 1991 113 8 0 chr10 86495942 86496208 -53820557 - AluSq SINE Alu -45 268 1 254 170 57 0 chr10 86499286 86499339 -53817426 + MIR SINE MIR 88 143 -119 21 0 0 0 chr10 86500507 86500528 -53816237 + AT_rich Low_complexity Low_complexity 1 21 0 2567 150 9 2 chr10 86500804 86501244 -53815521 - L1PA15 LINE L1 -3 6162 5720 227 319 52 43 chr10 86501461 86501577 -53815188 + MIR3 SINE MIR 89 205 -3 3404 196 14 42 chr10 86502388 86502720 -53814045 + L1MB7 LINE L1 4980 5320 -864 1737 181 17 0 chr10 86502720 86503012 -53813753 + AluJo SINE Alu 1 297 -15 3404 196 14 42 chr10 86503012 86503898 -53812867 + L1MB7 LINE L1 5320 6165 -19 274 310 112 0 chr10 86503906 86504022 -53812743 - LTR16A LTR ERVL -113 337 209 306 231 0 77 chr10 86504063 86504154 -53812611 - LTR16A LTR ERVL -312 138 55 273 285 51 46 chr10 86505892 86506090 -53810675 - MIR SINE MIR -51 211 21 219 357 36 12 chr10 86506137 86506221 -53810544 - MER5A DNA MER1_type -43 146 61 226 411 0 20 chr10 86506346 86506492 -53810273 - L2 LINE L2 -622 2692 2550 218 215 177 25 chr10 86507374 86507453 -53809312 - MIR SINE MIR 0 262 172 27 29 0 0 chr10 86508136 86508170 -53808595 + AT_rich Low_complexity Low_complexity 1 34 0 245 303 0 11 chr10 86508181 86508270 -53808495 - MIR SINE MIR -108 154 67 21 36 0 0 chr10 86508709 86508737 -53808028 + AT_rich Low_complexity Low_complexity 1 28 0 915 204 144 13 chr10 86509424 86509794 -53806971 + MER66A LTR ERV1 97 438 -40 253 303 90 0 chr10 86510356 86510445 -53806320 + MIR SINE MIR 47 143 -65 526 206 0 0 chr10 86510888 86510990 -53805775 + MER52A LTR ERV1 40 141 -1614 * 4890 160 101 57 chr10 86510985 86512100 -53804665 + MER52A LTR ERV1 591 1755 0 454 317 23 50 chr10 86512708 86512929 -53803836 + MIR SINE MIR 32 246 -16 24 0 0 0 chr10 86513332 86513356 -53803409 + AT_rich Low_complexity Low_complexity 1 24 0 2343 126 0 0 chr10 86514218 86514528 -53802237 + AluSx SINE Alu 1 310 -2 389 296 19 0 chr10 86514685 86514844 -53801921 - HAL1b LINE L1 -768 580 419 378 309 146 18 chr10 86515470 86515635 -53801130 + MER5A DNA MER1_type 4 189 0 585 278 91 88 chr10 86516386 86516760 -53800005 - L2 LINE L2 -1 3312 2938 216 355 32 24 chr10 86516851 86516975 -53799790 + L2 LINE L2 2505 2629 -685 180 0 0 0 chr10 86516976 86516996 -53799769 + (T)n Simple_repeat Simple_repeat 1 20 0 2058 82 0 0 chr10 86516996 86517253 -53799512 - AluSq SINE Alu -56 257 1 476 259 88 37 chr10 86517424 86517718 -53799047 + L1M4 LINE L1 4993 5301 -845 35 54 0 0 chr10 86518340 86518396 -53798369 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 86519872 86519903 -53796862 + AT_rich Low_complexity Low_complexity 1 31 0 558 227 141 37 chr10 86519999 86520162 -53796603 - MER5A DNA MER1_type 0 189 10 189 364 68 8 chr10 86521895 86522013 -53794752 - MIR3 SINE MIR -15 193 69 24 0 0 0 chr10 86522265 86522289 -53794476 + AT_rich Low_complexity Low_complexity 1 24 0 252 261 109 11 chr10 86522538 86522630 -53794135 + MER5A DNA MER1_type 9 109 -80 3694 176 43 0 chr10 86523233 86523899 -53792866 - MER44D DNA MER2_type -37 568 2 208 237 85 0 chr10 86523939 86523998 -53792767 - MIR SINE MIR -65 197 134 1652 158 6 76 chr10 86524761 86525090 -53791675 + AluJb SINE Alu 1 306 -6 183 329 51 0 chr10 86527138 86527217 -53789548 - MIR SINE MIR -7 255 173 192 279 49 98 chr10 86528009 86528131 -53788634 - L3 LINE CR1 -20 1557 1442 2155 118 7 0 chr10 86528191 86528488 -53788277 - AluSq SINE Alu -14 299 1 202 343 14 14 chr10 86528586 86528656 -53788109 + L2 LINE L2 3184 3253 -19 190 176 0 29 chr10 86528628 86528662 -53788103 + MIR SINE MIR 222 254 -8 * 22 0 0 0 chr10 86529086 86529108 -53787657 + AT_rich Low_complexity Low_complexity 1 22 0 240 320 183 39 chr10 86530033 86530630 -53786135 - L2 LINE L2 -697 2617 1935 226 167 42 0 chr10 86530916 86530964 -53785801 + CT-rich Low_complexity Low_complexity 3 52 0 1325 178 159 14 chr10 86531789 86532222 -53784543 + LTR54B LTR ERV1 1 496 -2 292 181 101 94 chr10 86532417 86532555 -53784210 + L1MA10 LINE L1 6196 6334 0 531 301 114 30 chr10 86533866 86534165 -53782600 + MLT1I LTR MaLR 85 408 -1 2113 111 10 3 chr10 86534761 86535059 -53781706 + AluSp SINE Alu 9 308 -5 25 0 0 0 chr10 86535064 86535089 -53781676 + AT_rich Low_complexity Low_complexity 1 25 0 387 295 94 41 chr10 86535106 86535425 -53781340 + L1MEd LINE L1 974 1400 -1090 4394 243 54 66 chr10 86535500 86538276 -53778489 + L1MB8 LINE L1 17 2902 -3923 1905 204 108 14 chr10 86538260 86538939 -53777826 + L1MB8 LINE L1 5672 6414 -262 * 21 0 0 0 chr10 86538939 86538960 -53777805 + AT_rich Low_complexity Low_complexity 1 21 0 2218 112 0 7 chr10 86539138 86539441 -53777324 - AluSx SINE Alu -6 306 6 1550 232 36 3 chr10 86540661 86540993 -53775772 - MSTD LTR MaLR 0 396 54 2773 270 30 21 chr10 86541023 86541794 -53774971 - MSTD-int LTR MaLR -5 1730 953 * 3033 233 25 14 chr10 86541791 86542341 -53774424 - MSTD-int LTR MaLR -1013 722 180 252 0 0 0 chr10 86542341 86542369 -53774396 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 15990 28 4 2 chr10 86542369 86545044 -53771721 - L1PA3 LINE L1 -3 6152 3472 3033 233 25 14 chr10 86545044 86545204 -53771561 - MSTD-int LTR MaLR -1554 181 3 1547 188 36 84 chr10 86545208 86545623 -53771142 - MSTD LTR MaLR -1 395 1 202 309 0 29 chr10 86545624 86545692 -53771073 - L2 LINE L2 -289 2983 2918 901 299 19 34 chr10 86546460 86546785 -53769980 + L1MDb LINE L1 16 335 -6074 1282 253 107 49 chr10 86546934 86547348 -53769417 + L1MDb LINE L1 691 1148 -5261 5287 53 6 0 chr10 86547348 86548008 -53768757 + L1PA7 LINE L1 5490 6153 -1 1282 253 107 49 chr10 86548008 86548163 -53768602 + L1MDb LINE L1 1148 1293 -5116 5992 259 20 60 chr10 86548180 86549084 -53767681 + L1MA9 LINE L1 7 945 -6223 1934 128 55 33 chr10 86549084 86549451 -53767314 + THE1C LTR MaLR 1 375 0 5992 259 20 60 chr10 86549451 86551897 -53764868 + L1MA9 LINE L1 945 2996 -4172 5120 214 15 97 chr10 86551904 86552609 -53764156 + L1MA9 LINE L1 3482 4243 -2924 2131 113 13 16 chr10 86552609 86552920 -53763845 + AluSx SINE Alu 1 310 -2 5120 214 15 97 chr10 86552920 86554107 -53762658 + L1MA9 LINE L1 4243 5220 -1947 3348 202 55 40 chr10 86554108 86554736 -53762029 + L1MA9 LINE L1 6134 6751 -582 1645 204 10 0 chr10 86554736 86555030 -53761735 + AluJo SINE Alu 7 303 -9 3348 202 55 40 chr10 86555030 86555395 -53761370 + L1MA9 LINE L1 6751 7149 -184 333 0 0 0 chr10 86555395 86555432 -53761333 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 3348 202 55 40 chr10 86555432 86555582 -53761183 + L1MA9 LINE L1 7149 7295 -38 181 135 0 54 chr10 86557553 86557590 -53759175 + L2 LINE L2 1674 1708 -1606 25 51 0 0 chr10 86558227 86558266 -53758499 + AT_rich Low_complexity Low_complexity 1 39 0 229 304 0 14 chr10 86559217 86559286 -53757479 + HAL1 LINE L1 2 69 -2438 367 324 82 59 chr10 86559575 86559831 -53756934 + HAL1 LINE L1 577 838 -1669 234 0 0 0 chr10 86559835 86559861 -53756904 + (GA)n Simple_repeat Simple_repeat 1 26 0 393 269 88 58 chr10 86559907 86560271 -53756494 + HAL1 LINE L1 972 1346 -1161 227 91 0 23 chr10 86560698 86560742 -53756023 + (TA)n Simple_repeat Simple_repeat 2 44 0 205 155 35 0 chr10 86562834 86562892 -53753873 + CT-rich Low_complexity Low_complexity 1 60 0 22 35 0 0 chr10 86563028 86563057 -53753708 + AT_rich Low_complexity Low_complexity 1 29 0 1960 94 50 44 chr10 86563060 86563358 -53753407 + AluSx SINE Alu 1 300 -12 1818 178 13 0 chr10 86563398 86563696 -53753069 + AluSx SINE Alu 1 302 -10 1162 206 24 10 chr10 86563711 86564003 -53752762 - MER33 DNA MER1_type -23 301 6 336 338 68 51 chr10 86564251 86564562 -53752203 - L1M4 LINE L1 -2062 4084 3769 653 183 40 0 chr10 86564806 86564932 -53751833 - MSTC LTR MaLR -297 131 1 496 166 2 17 chr10 86565445 86565877 -53750888 + AluJb SINE Alu 1 312 0 26 50 0 0 chr10 86565903 86565943 -53750822 + AT_rich Low_complexity Low_complexity 1 40 0 35 24 0 0 chr10 86566033 86566075 -53750690 + AT_rich Low_complexity Low_complexity 1 42 0 258 259 148 0 chr10 86566599 86566734 -53750031 - L1 LINE L1 -1089 5057 4903 22 0 0 0 chr10 86567037 86567059 -53749706 + AT_rich Low_complexity Low_complexity 1 22 0 458 224 0 0 chr10 86568263 86568361 -53748404 - MSTB1 LTR MaLR -8 449 352 1411 180 42 92 chr10 86568367 86568767 -53747998 - MSTB1 LTR MaLR -52 380 1 27 0 0 0 chr10 86569833 86569860 -53746905 + AT_rich Low_complexity Low_complexity 1 27 0 187 135 0 0 chr10 86569934 86569971 -53746794 - L2 LINE L2 0 3313 3277 248 163 33 98 chr10 86570016 86570108 -53746657 - MER94 DNA DNA -44 90 5 253 399 87 0 chr10 86570169 86570307 -53746458 + L2 LINE L2 2896 3045 -268 29 0 0 0 chr10 86573412 86573441 -53743324 + AT_rich Low_complexity Low_complexity 1 29 0 2098 137 0 0 chr10 86573773 86574066 -53742699 - AluSc SINE Alu -14 295 3 289 174 26 35 chr10 86574133 86574248 -53742517 + GA-rich Low_complexity Low_complexity 2 115 0 280 275 153 59 chr10 86574340 86574802 -53741963 + L1MC4a LINE L1 5254 5782 -2026 1615 174 113 6 chr10 86574802 86575130 -53741635 - MLT1A1 LTR MaLR -2 363 1 280 275 153 59 chr10 86575130 86575241 -53741524 + L1MC4a LINE L1 5782 5881 -1927 330 290 194 39 chr10 86575249 86575528 -53741237 + L1MC4a LINE L1 5866 6187 -1621 23 0 0 0 chr10 86575529 86575552 -53741213 + AT_rich Low_complexity Low_complexity 1 23 0 289 314 39 51 chr10 86575692 86575848 -53740917 - L2 LINE L2 -1 3312 3159 22 35 0 0 chr10 86576904 86576933 -53739832 + AT_rich Low_complexity Low_complexity 1 29 0 431 253 187 11 chr10 86578851 86578907 -53737858 + MIR SINE MIR 49 94 -168 284 62 0 21 chr10 86578907 86578955 -53737810 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 431 253 187 11 chr10 86578955 86579080 -53737685 + MIR SINE MIR 94 262 0 61 15 0 0 chr10 86579087 86579155 -53737610 + AT_rich Low_complexity Low_complexity 1 68 0 414 265 10 0 chr10 86579300 86579402 -53737363 - MER94 DNA DNA -31 103 1 37 0 0 0 chr10 86579663 86579700 -53737065 + AT_rich Low_complexity Low_complexity 1 37 0 362 259 91 74 chr10 86580274 86580616 -53736149 + L1ME4a LINE L1 5540 5916 -205 1628 176 0 20 chr10 86580629 86580924 -53735841 - AluJo SINE Alu -9 303 15 1752 176 10 10 chr10 86581543 86581850 -53734915 + AluJo SINE Alu 1 307 -5 392 348 39 0 chr10 86582836 86583017 -53733748 - MIR SINE MIR -1 261 74 1733 193 34 0 chr10 86583135 86583488 -53733277 + MLT1A1 LTR MaLR 1 365 0 273 299 80 66 chr10 86583686 86583823 -53732942 - MIR3 SINE MIR -67 141 3 21 0 0 0 chr10 86585470 86585491 -53731274 + AT_rich Low_complexity Low_complexity 1 21 0 247 324 14 0 chr10 86585610 86585684 -53731081 + GA-rich Low_complexity Low_complexity 3 77 0 748 289 23 23 chr10 86585972 86586190 -53730575 + MIR SINE MIR 14 231 -31 271 372 48 7 chr10 86586405 86586550 -53730215 + L2 LINE L2 3122 3272 0 2004 121 35 3 chr10 86586885 86587174 -53729591 - AluSx SINE Alu -14 298 1 584 215 0 7 chr10 86587449 86587593 -53729172 + GA-rich Low_complexity Low_complexity 3 145 0 328 351 0 0 chr10 86587602 86587736 -53729029 + A-rich Low_complexity Low_complexity 1 134 0 188 320 0 0 chr10 86589773 86589823 -53726942 - L2 LINE L2 -8 3264 3215 3738 76 8 0 chr10 86591786 86592285 -53724480 - L1PA8 LINE L1 -1 6171 5669 236 149 21 0 chr10 86592639 86592686 -53724079 + CT-rich Low_complexity Low_complexity 1 48 0 1421 195 47 10 chr10 86592687 86592984 -53723781 - AluJo SINE Alu -4 308 1 425 306 58 0 chr10 86594043 86594216 -53722549 + L2 LINE L2 563 745 -2569 236 296 37 65 chr10 86594244 86594352 -53722413 + MIR SINE MIR 51 155 -107 410 265 228 0 chr10 86594932 86595094 -53721671 + MIR SINE MIR 64 262 0 328 336 15 23 chr10 86595113 86595244 -53721521 - MIR SINE MIR -112 150 21 1012 115 65 104 chr10 86595562 86595822 -53720943 - L1MA8 LINE L1 0 6291 6042 * 2961 143 8 18 chr10 86595815 86596318 -53720447 + L1MA8 LINE L1 5525 6022 -269 2343 107 0 0 chr10 86596328 86596637 -53720128 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 86597006 86597035 -53719730 + AT_rich Low_complexity Low_complexity 1 29 0 2258 100 3 3 chr10 86597338 86597647 -53719118 + AluY SINE Alu 1 309 -2 195 125 0 0 chr10 86598711 86598751 -53718014 + (CA)n Simple_repeat Simple_repeat 2 41 0 2381 125 8 19 chr10 86599091 86599459 -53717306 - THE1B LTR MaLR 0 364 1 11884 90 3 4 chr10 86599459 86601040 -53715725 - THE1B-int LTR MaLR 0 1580 2 2408 87 25 33 chr10 86601041 86601407 -53715358 - THE1B LTR MaLR 0 364 2 1139 237 62 22 chr10 86601487 86601845 -53714920 - MLT1A2 LTR MaLR 0 374 3 787 176 57 11 chr10 86601917 86602093 -53714672 - MER53 DNA DNA -2 187 4 2391 98 0 0 chr10 86603625 86603978 -53712787 - AluSx SINE Alu 0 355 3 3306 159 22 10 chr10 86604198 86604784 -53711981 - L1PA16 LINE L1 -9 6157 5565 322 305 38 61 chr10 86604884 86605097 -53711668 + HAL1 LINE L1 2225 2432 -75 2013 134 0 0 chr10 86605959 86606242 -53710523 + AluSq SINE Alu 3 285 -28 2354 77 0 22 chr10 86606242 86606554 -53710211 + AluY SINE Alu 1 305 -6 194 108 54 0 chr10 86606572 86606609 -53710156 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 222 37 0 0 chr10 86606835 86606862 -53709903 + (TA)n Simple_repeat Simple_repeat 1 27 0 188 389 29 7 chr10 86606956 86607095 -53709670 - MIR SINE MIR -3 259 118 224 245 74 92 chr10 86607211 86607274 -53709491 - MIR SINE MIR -18 244 181 2149 101 39 0 chr10 86607274 86607560 -53709205 - AluSx SINE Alu -15 297 1 224 245 74 92 chr10 86607560 86607659 -53709106 - MIR SINE MIR -81 181 85 568 268 73 3 chr10 86607816 86608061 -53708704 - LTR33A LTR ERVL -23 500 232 412 238 16 33 chr10 86608116 86608238 -53708527 - LTR33A LTR ERVL -401 122 3 217 302 0 0 chr10 86608945 86608998 -53707767 - L2 LINE L2 -17 3296 3244 463 240 133 0 chr10 86609335 86609485 -53707280 - LTR33A LTR ERVL -26 497 328 21 0 0 0 chr10 86609569 86609590 -53707175 + AT_rich Low_complexity Low_complexity 1 21 0 237 318 249 35 chr10 86609712 86609913 -53706852 + L3 LINE CR1 1267 1510 -67 2293 75 3 17 chr10 86609974 86610269 -53706496 + AluY SINE Alu 9 299 -12 23 0 0 0 chr10 86610398 86610421 -53706344 + AT_rich Low_complexity Low_complexity 1 23 0 1318 217 30 21 chr10 86611575 86611907 -53704858 + MLT1A1 LTR MaLR 4 338 -27 312 330 9 0 chr10 86612137 86612243 -53704522 + L3 LINE CR1 1382 1488 -89 1607 163 4 11 chr10 86612277 86612547 -53704218 - AluSx SINE Alu -44 268 1 732 208 50 0 chr10 86613356 86613558 -53703207 + L1MA8 LINE L1 6075 6286 -5 910 294 129 44 chr10 86614139 86614512 -53702253 + L2 LINE L2 2421 2884 -429 1967 150 0 0 chr10 86614512 86614799 -53701966 - AluSx SINE Alu -1 311 25 910 294 129 44 chr10 86614799 86615036 -53701729 + L2 LINE L2 2884 3099 -214 496 296 6 12 chr10 86615071 86615233 -53701532 + MER5A DNA MER1_type 27 187 -2 274 298 16 16 chr10 86615249 86615370 -53701395 + L1ME3A LINE L1 4034 4154 -1992 239 296 30 52 chr10 86615518 86615748 -53701017 + L1ME3A LINE L1 4374 4598 -1548 327 25 0 0 chr10 86616096 86616136 -53700629 + (CA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 86616194 86616215 -53700550 + AT_rich Low_complexity Low_complexity 1 21 0 1612 183 3 31 chr10 86616277 86616567 -53700198 + AluJo SINE Alu 1 282 -30 446 260 0 0 chr10 86616593 86616697 -53700068 + FLAM_C SINE Alu 2 105 -38 244 0 0 53 chr10 86616930 86616968 -53699797 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 2242 110 0 3 chr10 86617050 86617360 -53699405 - AluSx SINE Alu -3 309 1 477 256 74 42 chr10 86617452 86617667 -53699098 + L1ME3A LINE L1 5608 5829 -341 1916 106 4 0 chr10 86618013 86618307 -53698458 + AluSc SINE Alu 29 309 0 397 222 188 28 chr10 86618380 86618556 -53698209 + MER3 DNA MER1_type 4 207 -2 350 284 58 140 chr10 86618903 86619124 -53697641 + L1MEd LINE L1 827 992 -5127 1421 160 0 4 chr10 86619124 86619361 -53697404 + L1PA15 LINE L1 5929 6164 -1 350 284 58 140 chr10 86619361 86619603 -53697162 + L1MEd LINE L1 992 1252 -4867 1923 126 3 60 chr10 86619622 86619940 -53696825 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 86619949 86619970 -53696795 + AT_rich Low_complexity Low_complexity 1 21 0 1422 159 3 99 chr10 86619975 86620309 -53696456 + AluJb SINE Alu 3 304 -8 234 62 0 0 chr10 86620617 86620649 -53696116 + (TA)n Simple_repeat Simple_repeat 2 33 0 2248 119 0 0 chr10 86620649 86620952 -53695813 - AluSx SINE Alu -9 303 1 283 311 41 0 chr10 86622248 86622370 -53694395 + MER103 DNA DNA 16 142 -24 231 119 21 32 chr10 86622527 86622622 -53694143 + GA-rich Low_complexity Low_complexity 1 93 0 206 290 56 80 chr10 86623596 86623758 -53693007 + MIR3 SINE MIR 5 162 -46 21 57 0 0 chr10 86624469 86624504 -53692261 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr10 86624560 86624586 -53692179 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr10 86625745 86625769 -53690996 + (CA)n Simple_repeat Simple_repeat 1 24 0 527 302 47 12 chr10 86626688 86626860 -53689905 - MIR SINE MIR -48 214 37 24 77 0 0 chr10 86629726 86629778 -53686987 + AT_rich Low_complexity Low_complexity 1 52 0 238 249 162 49 chr10 86629808 86630073 -53686692 - L1ME4a LINE L1 -38 6083 5789 26 50 0 0 chr10 86630400 86630440 -53686325 + AT_rich Low_complexity Low_complexity 1 40 0 1611 192 10 7 chr10 86630686 86630988 -53685777 - AluJb SINE Alu -9 303 1 234 269 0 0 chr10 86631119 86631171 -53685594 + LTR30 LTR ERV1 1 52 -670 1957 102 185 176 chr10 86631171 86631844 -53684921 + LTR12 LTR ERV1 57 2313 -125 577 324 12 0 chr10 86631847 86632017 -53684748 - MIR SINE MIR -71 191 20 2217 141 57 43 chr10 86632627 86633046 -53683719 + MER61C LTR ERV1 1 425 -9 1815 98 109 0 chr10 86633194 86633459 -53683306 - AluSx SINE Alu -15 297 4 470 311 62 6 chr10 86633589 86633766 -53682999 + MIR SINE MIR 47 233 -29 250 234 0 21 chr10 86634404 86634498 -53682267 + GA-rich Low_complexity Low_complexity 1 92 0 290 246 127 28 chr10 86635941 86636083 -53680682 + MLT1J1 LTR MaLR 1 156 -290 312 188 130 0 chr10 86636607 86636676 -53680089 + MER116 DNA Mariner 1 78 -2 201 74 0 0 chr10 86636984 86637011 -53679754 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 223 333 156 21 chr10 86637410 86637551 -53679214 - L2 LINE L2 -9 3263 3104 4738 133 21 75 chr10 86639081 86639292 -53677473 + Tigger3b DNA MER2_type 1 222 -2806 2090 117 3 0 chr10 86639292 86639574 -53677191 + AluSq SINE Alu 1 283 -30 4738 133 21 75 chr10 86639574 86640315 -53676450 + Tigger3b DNA MER2_type 222 902 -329 273 289 24 0 chr10 86642415 86642498 -53674267 + GA-rich Low_complexity Low_complexity 3 87 0 497 295 75 37 chr10 86643303 86643544 -53673221 - MIR SINE MIR -1 261 12 287 304 22 22 chr10 86644287 86644379 -53672386 - L2 LINE L2 0 3313 3222 599 296 18 23 chr10 86644435 86644655 -53672110 + MIR SINE MIR 37 255 -7 452 321 67 6 chr10 86644858 86645023 -53671742 + MIR SINE MIR 13 187 -75 691 237 19 26 chr10 86645027 86645183 -53671582 + MER45A DNA AcHobo 21 175 -3 381 198 37 0 chr10 86645187 86645268 -53671497 + MIR SINE MIR 178 261 -1 4144 154 17 11 chr10 86645989 86646131 -53670634 + MER50 LTR ERV1 1 141 -593 2718 75 124 8 chr10 86646131 86646533 -53670232 + LTR7 LTR ERV1 1 449 -1 4144 154 17 11 chr10 86646533 86647096 -53669669 + MER50 LTR ERV1 141 710 -24 1532 166 72 7 chr10 86647377 86647693 -53669072 + AluJb SINE Alu 1 334 0 2071 133 7 0 chr10 86647936 86648237 -53668528 + AluSx SINE Alu 1 303 -9 386 266 0 0 chr10 86648542 86648636 -53668129 + LTR8A LTR ERV1 600 693 -34 4063 146 21 22 chr10 86648885 86649461 -53667304 + LTR8A LTR ERV1 1 578 -149 1944 117 11 0 chr10 86649461 86649792 -53666973 + AluSx SINE Alu 1 334 0 4063 146 21 22 chr10 86649792 86649940 -53666825 + LTR8A LTR ERV1 578 725 -2 364 282 61 66 chr10 86650398 86650823 -53665942 + L1MA8 LINE L1 5862 6284 -7 25 0 0 0 chr10 86650830 86650855 -53665910 + AT_rich Low_complexity Low_complexity 1 25 0 405 289 46 30 chr10 86651316 86651538 -53665227 - MIR SINE MIR -14 248 25 1604 199 41 39 chr10 86651572 86651960 -53664805 - MER57A LTR ERV1 -2 401 13 496 222 29 82 chr10 86651970 86652177 -53664588 + MER33 DNA MER1_type 42 237 -87 271 302 47 9 chr10 86652366 86652472 -53664293 - MER5B DNA MER1_type -68 110 1 2138 73 11 0 chr10 86653505 86653839 -53662926 - AluY SINE Alu 0 341 5 1736 189 90 47 chr10 86654268 86654624 -53662141 - MLT1C LTR MaLR -3 464 84 1834 212 11 0 chr10 86654624 86654983 -53661782 - MLT1A1 LTR MaLR -2 363 1 1736 189 90 47 chr10 86654983 86655071 -53661694 - MLT1C LTR MaLR -383 84 1 270 0 0 0 chr10 86656172 86656202 -53660563 + (TG)n Simple_repeat Simple_repeat 1 30 0 239 280 128 24 chr10 86657350 86657475 -53659290 - MIR SINE MIR -30 232 95 1994 221 24 21 chr10 86657560 86657985 -53658780 - MLT2B3 LTR ERVL -128 426 1 212 365 148 6 chr10 86658018 86658221 -53658544 - MIR SINE MIR -3 259 30 1459 162 53 118 chr10 86659593 86660007 -53656758 - MSTD LTR MaLR -9 387 1 190 353 12 12 chr10 86660198 86660283 -53656482 - L2 LINE L2 0 3272 3188 21 0 0 0 chr10 86660386 86660407 -53656358 + AT_rich Low_complexity Low_complexity 1 21 0 1998 133 0 0 chr10 86660442 86660727 -53656038 + AluSc SINE Alu 6 290 -19 204 363 39 29 chr10 86660948 86661050 -53655715 - L2 LINE L2 -592 2722 2620 4848 247 59 24 chr10 86661132 86663601 -53653164 - L1ME1 LINE L1 -12 6154 3600 24 0 0 0 chr10 86663648 86663672 -53653093 + AT_rich Low_complexity Low_complexity 1 24 0 1200 363 0 55 chr10 86663751 86664079 -53652686 + AluSx SINE Alu 1 310 -2 816 213 38 33 chr10 86664202 86664385 -53652380 + MER5A DNA MER1_type 6 189 0 710 359 89 31 chr10 86664466 86665233 -53651532 - L2 LINE L2 -1877 1437 627 1913 138 28 0 chr10 86666348 86666637 -53650128 + AluSx SINE Alu 1 297 -15 441 0 0 0 chr10 86666668 86666717 -53650048 + (TG)n Simple_repeat Simple_repeat 2 50 0 1276 190 42 10 chr10 86667068 86667357 -53649408 - L1MC3 LINE L1 -8 7777 7480 299 309 114 30 chr10 86667358 86667594 -53649171 - MIR SINE MIR -5 257 2 568 278 57 11 chr10 86668794 86668970 -53647795 + MIR SINE MIR 48 231 -31 230 174 43 0 chr10 86669047 86669093 -53647672 + CT-rich Low_complexity Low_complexity 3 50 0 27 0 0 0 chr10 86669707 86669734 -53647031 + AT_rich Low_complexity Low_complexity 1 27 0 1891 153 0 0 chr10 86670344 86670626 -53646139 + AluSx SINE Alu 1 282 -30 4421 215 26 92 chr10 86670893 86672456 -53644309 - L1MC3 LINE L1 -19 7766 6306 1911 260 37 34 chr10 86672466 86673055 -53643710 - L1MCb LINE L1 -5454 591 1 354 107 0 0 chr10 86673528 86673584 -53643181 + (GGGA)n Simple_repeat Simple_repeat 4 59 0 2023 127 47 42 chr10 86673671 86674032 -53642733 - THE1B LTR MaLR -1 363 1 216 283 22 0 chr10 86674739 86674831 -53641934 + (TA)n Simple_repeat Simple_repeat 2 95 0 225 280 103 41 chr10 86674888 86675131 -53641634 - L1MC3 LINE L1 -1985 5823 5566 825 207 67 0 chr10 86675193 86675357 -53641408 - FAM SINE Alu 0 175 1 2198 177 61 0 chr10 86675772 86676179 -53640586 - MSTB1 LTR MaLR 0 432 1 2199 129 0 0 chr10 86676327 86676630 -53640135 - AluSx SINE Alu -9 303 1 266 230 35 0 chr10 86676647 86676734 -53640031 - L1M4 LINE L1 -3671 2475 2386 22 56 0 0 chr10 86676750 86676786 -53639979 + AT_rich Low_complexity Low_complexity 1 36 0 298 309 0 0 chr10 86677428 86677509 -53639256 - MER117 DNA MER1_type -104 93 13 259 253 139 0 chr10 86677632 86677711 -53639054 - MIR SINE MIR -77 185 96 2244 113 0 0 chr10 86680941 86681243 -53635522 - AluSx SINE Alu -6 306 5 791 272 119 51 chr10 86681473 86681959 -53634806 + LTR33 LTR ERVL 3 521 0 2132 110 38 0 chr10 86682219 86682510 -53634255 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr10 86682896 86682917 -53633848 + AT_rich Low_complexity Low_complexity 1 21 0 1159 60 0 0 chr10 86683396 86683545 -53633220 - AluY SINE Alu 0 311 163 252 0 0 0 chr10 86685056 86685084 -53631681 + (A)n Simple_repeat Simple_repeat 1 28 0 1553 179 11 0 chr10 86685845 86686108 -53630657 - MER47A DNA MER2_type -97 269 4 292 203 72 7 chr10 86686108 86686246 -53630519 + (TA)n Simple_repeat Simple_repeat 2 148 0 1996 142 13 7 chr10 86686497 86686807 -53629958 - AluSx SINE Alu 0 312 1 2049 125 7 0 chr10 86687300 86687587 -53629178 - AluSx SINE Alu -23 289 1 336 273 164 9 chr10 86689406 86689516 -53627249 - L2 LINE L2 0 3313 3187 22 35 0 0 chr10 86689769 86689798 -53626967 + AT_rich Low_complexity Low_complexity 1 29 0 630 332 86 19 chr10 86691181 86691854 -53624911 - L2 LINE L2 -16 3297 2576 21 57 0 0 chr10 86692927 86692962 -53623803 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr10 86693248 86693286 -53623479 + (CA)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr10 86693597 86693619 -53623146 + AT_rich Low_complexity Low_complexity 1 22 0 307 239 72 124 chr10 86696165 86696273 -53620492 + MIR SINE MIR 41 134 -128 1764 173 10 13 chr10 86696273 86696574 -53620191 + AluJb SINE Alu 1 300 -12 307 239 72 124 chr10 86696574 86696674 -53620091 + MIR SINE MIR 134 238 -24 234 361 0 28 chr10 86698311 86698419 -53618346 - MIR SINE MIR -66 142 38 213 390 126 34 chr10 86699419 86699688 -53617077 - L3 LINE CR1 -733 844 551 294 306 70 25 chr10 86699882 86700039 -53616726 + MIR SINE MIR 34 197 -65 700 243 29 38 chr10 86701169 86701379 -53615386 + MIR SINE MIR 5 212 -50 183 204 0 0 chr10 86702710 86702754 -53614011 + (TG)n Simple_repeat Simple_repeat 1 44 0 270 0 0 0 chr10 86704627 86704657 -53612108 + (TG)n Simple_repeat Simple_repeat 1 30 0 1008 268 35 19 chr10 86705651 86705965 -53610800 + LTR16A LTR ERVL 132 450 0 348 358 37 5 chr10 86706986 86707173 -53609592 - MIR SINE MIR -49 213 21 2033 152 89 17 chr10 86707289 86707704 -53609061 + MER65A LTR ERV1 1 445 0 311 44 22 0 chr10 86707714 86707759 -53609006 + (TG)n Simple_repeat Simple_repeat 2 47 0 750 318 9 9 chr10 86707995 86708215 -53608550 + MIR SINE MIR 12 231 -31 186 429 0 0 chr10 86709162 86709232 -53607533 - L2 LINE L2 -5 3267 3198 483 202 168 0 chr10 86710177 86710296 -53606469 - MER67A LTR ERV1 0 543 405 281 172 0 0 chr10 86710310 86710368 -53606397 + L1 LINE L1 4181 4238 -1908 2772 96 2 35 chr10 86710368 86710825 -53605940 + LTR7 LTR ERV1 1 442 -8 873 243 65 14 chr10 86710832 86711186 -53605579 + L1 LINE L1 4233 4604 -1542 795 202 30 20 chr10 86711363 86711561 -53605204 + MER20 DNA MER1_type 1 200 -19 1413 89 6 0 chr10 86712384 86712564 -53604201 + AluSq SINE Alu 1 181 -132 228 135 0 0 chr10 86712909 86712946 -53603819 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 449 349 62 24 chr10 86712949 86713290 -53603475 - L2 LINE L2 -599 2715 2362 1016 306 57 5 chr10 86713663 86714032 -53602733 - MLT1I LTR MaLR -13 396 9 202 301 103 64 chr10 86714045 86714201 -53602564 - MIR SINE MIR -53 209 48 1969 153 3 3 chr10 86714767 86715075 -53601690 + AluSg SINE Alu 1 308 -2 188 388 37 19 chr10 86715375 86715589 -53601176 - L2 LINE L2 -1648 1666 1449 2088 100 18 0 chr10 86715648 86715973 -53600792 + AluSq SINE Alu 1 330 0 225 326 78 54 chr10 86716597 86716839 -53599926 - L2 LINE L2 -2401 913 666 51 31 0 0 chr10 86718036 86718101 -53598664 + AT_rich Low_complexity Low_complexity 1 65 0 50 51 0 0 chr10 86718710 86718788 -53597977 + AT_rich Low_complexity Low_complexity 1 78 0 2253 97 3 3 chr10 86718941 86719239 -53597526 - AluSq SINE Alu -11 302 5 512 227 8 23 chr10 86719535 86719667 -53597098 + MLT1F1 LTR MaLR 1 130 -437 205 182 0 23 chr10 86720163 86720207 -53596558 + L2 LINE L2 3271 3313 0 193 367 43 22 chr10 86720341 86720480 -53596285 - L2 LINE L2 -205 3067 2926 282 295 127 42 chr10 86721490 86721656 -53595109 + MIR SINE MIR 4 183 -79 5408 111 30 12 chr10 86771965 86772519 -53544246 + L1PA13 LINE L1 4834 5377 -786 2043 131 34 0 chr10 86772519 86772816 -53543949 + AluSq SINE Alu 1 307 -6 5408 111 30 12 chr10 86772816 86773571 -53543194 + L1PA13 LINE L1 5377 6161 -2 465 271 45 12 chr10 86773609 86773856 -53542909 + L1MC4a LINE L1 7554 7808 0 200 319 28 14 chr10 86774721 86774793 -53541972 + L2 LINE L2 3236 3308 -5 2368 87 0 16 chr10 86776005 86776314 -53540451 + AluY SINE Alu 1 304 -7 11314 119 20 37 chr10 86776763 86779011 -53537754 - L1P3 LINE L1 -4189 2272 1 1169 272 122 20 chr10 86779018 86779067 -53537698 - L1M4 LINE L1 -1062 5084 5041 1054 163 5 33 chr10 86779067 86779282 -53537483 - MER3 DNA MER1_type 0 209 1 1169 272 122 20 chr10 86779282 86780110 -53536655 - L1M4 LINE L1 -1105 5041 4118 11643 171 20 18 chr10 86780391 86782934 -53533831 + MER52-int LTR ERV1 1576 4185 -2906 369 168 262 7 chr10 86783807 86783956 -53532809 - MER53 DNA DNA -2 187 1 2003 178 5 22 chr10 86784254 86784625 -53532140 + MLT1A1 LTR MaLR 1 365 0 263 279 15 0 chr10 86785057 86785125 -53531640 + CT-rich Low_complexity Low_complexity 1 69 0 291 252 143 17 chr10 86785234 86785353 -53531412 + MIR SINE MIR 123 256 -6 247 410 28 0 chr10 86785884 86786028 -53530737 + L2 LINE L2 2727 2874 -440 224 224 0 119 chr10 86786008 86786075 -53530690 - L2 LINE L2 0 3313 3255 * 708 190 15 22 chr10 86786075 86786212 -53530553 + FLAM_A SINE Alu 1 136 -6 182 276 32 49 chr10 86786250 86786373 -53530392 - L2 LINE L2 -91 3222 3102 218 296 30 89 chr10 86786431 86786600 -53530165 + L2 LINE L2 2934 3092 -180 254 273 30 81 chr10 86786719 86786818 -53529947 + L2 LINE L2 3137 3230 -42 1768 171 51 18 chr10 86786884 86787218 -53529547 + MER7A DNA MER2_type 3 345 -1 215 185 56 37 chr10 86789085 86789139 -53527626 + MIR3 SINE MIR 100 154 -54 333 48 0 0 chr10 86789514 86789556 -53527209 - MLT2B2 LTR ERVL 0 464 423 285 29 0 0 chr10 86789556 86789590 -53527175 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 114 0 0 chr10 86789608 86789643 -53527122 + (TG)n Simple_repeat Simple_repeat 2 36 0 253 290 0 11 chr10 86789829 86789922 -53526843 + (TA)n Simple_repeat Simple_repeat 2 93 0 2090 209 35 26 chr10 86789927 86790387 -53526378 - MLT2B2 LTR ERVL -51 464 1 2913 258 62 31 chr10 86791054 86792913 -53523852 - L1MCb LINE L1 -4511 2053 1 5764 115 3 11 chr10 86792949 86794214 -53522551 - L1PA13 LINE L1 -5 6158 4878 2075 168 9 12 chr10 86794375 86794797 -53521968 - L1PA13 LINE L1 -2172 3974 3554 843 177 0 0 chr10 86794799 86794957 -53521808 - L1PA13 LINE L1 -3884 2262 2105 766 159 0 12 chr10 86796476 86796639 -53520126 - L1P LINE L1 -3635 2511 2351 228 254 0 0 chr10 86796777 86796836 -53519929 - Tigger2 DNA MER2_type -1596 1122 1064 361 233 67 67 chr10 86797211 86797361 -53519404 + MER58C DNA MER1_type 66 215 0 24 32 0 0 chr10 86797842 86797873 -53518892 + AT_rich Low_complexity Low_complexity 1 31 0 21033 78 6 0 chr10 86797873 86801528 -53515237 - L1PA3 LINE L1 0 6155 2482 1433 134 167 48 chr10 86802182 86802517 -53514248 + THE1C LTR MaLR 1 375 0 583 206 185 27 chr10 86802864 86803010 -53513755 + MER5A DNA MER1_type 2 170 -19 204 368 0 0 chr10 86803092 86803179 -53513586 + MIR3 SINE MIR 86 172 -36 500 284 93 9 chr10 86803188 86803413 -53513352 - MIR SINE MIR -10 252 9 226 338 56 48 chr10 86803985 86804216 -53512549 + L2 LINE L2 2367 2599 -715 678 269 6 6 chr10 86804318 86804485 -53512280 - MLT1E2 LTR MaLR 0 626 460 188 150 0 0 chr10 86804911 86804951 -53511814 + L2 LINE L2 3016 3055 -217 783 226 42 37 chr10 86805082 86805498 -53511267 - MLT2B1 LTR ERVL 0 520 15 260 262 33 0 chr10 86805551 86805612 -53511153 + L2 LINE L2 3205 3267 -5 252 157 12 24 chr10 86806047 86806130 -53510635 + CT-rich Low_complexity Low_complexity 3 84 0 261 278 33 11 chr10 86806823 86806913 -53509852 - MIR3 SINE MIR -4 204 113 3426 180 25 21 chr10 86808309 86808537 -53508228 + L1PA13 LINE L1 1 227 -6560 1104 78 7 0 chr10 86808537 86808690 -53508075 + L1PA5 LINE L1 6001 6154 0 3426 180 25 21 chr10 86808690 86809132 -53507633 + L1PA13 LINE L1 227 674 -6113 17208 197 31 11 chr10 86809172 86809638 -53507127 + L1PA13 LINE L1 758 1213 -5601 198 103 0 0 chr10 86809638 86809667 -53507098 + (CTG)n Simple_repeat Simple_repeat 1 29 0 17208 197 31 11 chr10 86809667 86815110 -53501655 + L1PA13 LINE L1 1213 6805 -9 185 258 0 65 chr10 86815647 86815709 -53501056 - L2 LINE L2 -213 3059 3002 2295 168 34 17 chr10 86815796 86816214 -53500551 + MSTA LTR MaLR 2 426 -2 243 316 18 61 chr10 86816497 86816611 -53500154 + L3 LINE CR1 952 1060 -517 274 272 49 0 chr10 86816635 86816716 -53500049 + MER5A DNA MER1_type 28 112 -77 1934 93 4 0 chr10 86816731 86816989 -53499776 + AluY SINE Alu 53 311 0 295 308 68 15 chr10 86818491 86818624 -53498141 - MIR SINE MIR -30 232 93 21 36 0 0 chr10 86819201 86819229 -53497536 + AT_rich Low_complexity Low_complexity 1 28 0 246 133 22 22 chr10 86819788 86819833 -53496932 + MIR SINE MIR 10 54 -208 1215 201 10 113 chr10 86819841 86820258 -53496507 - MLT1A2 LTR MaLR 0 374 1 506 274 65 13 chr10 86820259 86820412 -53496353 + MIR SINE MIR 100 260 -2 211 274 152 78 chr10 86821091 86821192 -53495573 - MIR SINE MIR -3 259 167 2411 87 0 0 chr10 86821192 86821490 -53495275 - AluSq SINE Alu -15 298 1 211 274 152 78 chr10 86821490 86821618 -53495147 - MIR SINE MIR -95 167 13 277 262 114 69 chr10 86822041 86822575 -53494190 - L1ME LINE L1 -4982 1223 666 427 358 47 9 chr10 86822673 86822905 -53493860 - L1ME LINE L1 -6122 274 34 762 155 7 40 chr10 86823224 86823372 -53493393 + FLAM_C SINE Alu 1 143 0 699 168 0 24 chr10 86823383 86823508 -53493257 + AluSg/x SINE Alu 121 242 -70 977 316 33 5 chr10 86823508 86823875 -53492890 - L1M2 LINE L1 -6472 377 1 481 243 208 41 chr10 86824179 86824520 -53492245 + MLT1H1 LTR MaLR 158 555 0 1994 133 130 36 chr10 86825126 86825364 -53491401 - MSTA LTR MaLR 0 428 137 2138 94 49 0 chr10 86825364 86825650 -53491115 + AluSx SINE Alu 1 300 -12 1994 133 130 36 chr10 86825650 86825802 -53490963 - MSTA LTR MaLR -291 137 1 1770 206 80 9 chr10 86825865 86826301 -53490464 + MLT1C LTR MaLR 1 467 0 1232 179 22 15 chr10 86826326 86826600 -53490165 - MER11B LTR ERVK 0 1236 961 1317 89 54 2 chr10 86826703 86826977 -53489788 - MER11B LTR ERVK -856 380 1 2116 139 0 0 chr10 86827065 86827366 -53489399 - AluSx SINE Alu -11 301 1 21 36 0 0 chr10 86827367 86827395 -53489370 + AT_rich Low_complexity Low_complexity 1 28 0 246 259 35 12 chr10 86827774 86827859 -53488906 + MLT1D-int LTR MaLR 1248 1334 -37 1253 237 115 37 chr10 86827859 86828294 -53488471 + MLT1E3 LTR MaLR 156 624 0 226 274 49 20 chr10 86828307 86828409 -53488356 + MLT1E3-int LTR MaLR 36 140 -1231 408 86 0 0 chr10 86828414 86828472 -53488293 - THE1-int LTR MaLR -1029 551 494 2403 107 0 0 chr10 86828472 86828781 -53487984 - AluSq SINE Alu -4 309 1 661 272 23 14 chr10 86828787 86829004 -53487761 + MLT1E3-int LTR MaLR 299 517 -854 628 270 82 13 chr10 86829301 86829617 -53487148 - L1MCa LINE L1 -3516 3024 2675 1387 173 141 32 chr10 86829617 86829930 -53486835 + MER7A DNA MER2_type 2 346 0 628 270 82 13 chr10 86829930 86830002 -53486763 - L1MCa LINE L1 -3865 2675 2609 371 215 85 39 chr10 86830003 86830133 -53486632 + MLT1D LTR MaLR 1 136 -369 629 293 74 30 chr10 86830235 86831148 -53485617 - L1MCa LINE L1 -4328 2393 1234 2929 182 15 40 chr10 86831148 86831594 -53485171 - MER54B LTR ERVL 0 793 364 2119 93 40 0 chr10 86831594 86831918 -53484847 + L1PA8 LINE L1 5834 6170 -2 2929 182 15 40 chr10 86831918 86832076 -53484689 - MER54B LTR ERVL -429 364 204 235 232 71 18 chr10 86832178 86832290 -53484475 - L1MCa LINE L1 -4922 1100 983 225 0 0 0 chr10 86834126 86834151 -53482614 + (CA)n Simple_repeat Simple_repeat 1 25 0 1339 270 80 20 chr10 86834971 86835812 -53480953 - L1M4 LINE L1 -2064 4082 3192 499 151 0 0 chr10 86835861 86835934 -53480831 + AluS SINE Alu 1 73 -240 584 125 0 0 chr10 86835937 86836025 -53480740 + L1P LINE L1 11 98 -6048 * 10404 124 11 21 chr10 86836023 86837799 -53478966 + L1P LINE L1 623 2380 -3766 242 304 29 0 chr10 86837899 86837968 -53478797 - L1MCa LINE L1 -5560 980 910 748 228 0 90 chr10 86837971 86838160 -53478605 + FAM SINE Alu 1 172 -3 1913 266 109 19 chr10 86838229 86838932 -53477833 - L1MCa LINE L1 -5771 769 3 307 327 31 25 chr10 86839100 86839262 -53477503 - L1M4 LINE L1 -1874 4272 4110 219 69 0 0 chr10 86839713 86839742 -53477023 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr10 86839752 86839775 -53476990 + AT_rich Low_complexity Low_complexity 1 23 0 573 245 7 0 chr10 86839824 86839967 -53476798 + L1PA16 LINE L1 6007 6150 -16 183 100 0 0 chr10 86840724 86840754 -53476011 + (C)n Simple_repeat Simple_repeat 1 30 0 216 268 98 36 chr10 86842228 86842340 -53474425 - MIR SINE MIR -56 206 88 3741 155 56 39 chr10 86842471 86843243 -53473522 + LTR1 LTR ERV1 1 785 0 299 270 60 20 chr10 86843323 86843423 -53473342 - MER5A DNA MER1_type -80 109 6 223 274 68 14 chr10 86843878 86843951 -53472814 + MIR3 SINE MIR 105 181 -27 505 237 42 8 chr10 86845334 86845452 -53471313 + MIR SINE MIR 27 148 -114 561 136 0 0 chr10 86845455 86845536 -53471229 + AluJ/FLAM SINE Alu 3 83 -229 243 170 0 0 chr10 86845903 86845950 -53470815 + LTR1 LTR ERV1 716 762 -23 188 367 63 0 chr10 86847331 86847410 -53469355 - MIR SINE MIR -147 115 32 207 305 76 17 chr10 86849474 86849592 -53467173 - L2 LINE L2 -9 3304 3180 277 384 89 30 chr10 86849707 86850009 -53466756 - L2 LINE L2 -2694 620 301 423 195 0 0 chr10 86850011 86850088 -53466677 + AluJ/FLAM SINE Alu 1 77 -235 28 0 0 0 chr10 86850633 86850661 -53466104 + AT_rich Low_complexity Low_complexity 1 28 0 1850 166 95 26 chr10 86850670 86851091 -53465674 + LTR7 LTR ERV1 1 450 0 417 379 33 8 chr10 86851620 86851860 -53464905 - MIR SINE MIR -11 251 6 49 52 0 0 chr10 86852318 86852395 -53464370 + AT_rich Low_complexity Low_complexity 1 77 0 2415 69 7 0 chr10 86852520 86852823 -53463942 - AluY SINE Alu -6 305 1 2620 229 72 24 chr10 86853221 86854310 -53462455 - L1ME1 LINE L1 -5 6161 5005 3764 162 19 36 chr10 86854313 86855148 -53461617 + HSMAR2 DNA Mariner 2 822 -480 5141 127 16 17 chr10 86855306 86856267 -53460498 - L1M1 LINE L1 -3890 3675 2716 * 12348 184 23 14 chr10 86856245 86856285 -53460480 - L1M1 LINE L1 -5098 2467 2429 1799 162 35 0 chr10 86856285 86856575 -53460190 - AluSg SINE Alu -8 302 3 12348 184 23 14 chr10 86856575 86858967 -53457798 - L1M1 LINE L1 -5136 2429 15 201 171 0 0 chr10 86858992 86859027 -53457738 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 583 200 0 27 chr10 86859033 86859183 -53457582 + L1MD3 LINE L1 7713 7858 -137 391 263 79 20 chr10 86859390 86859542 -53457223 + L1MD3 LINE L1 7826 7986 -9 515 341 56 25 chr10 86860411 86860523 -53456242 + ERVL LTR ERVL 3882 3989 -1766 2111 137 131 8 chr10 86860523 86860904 -53455861 - MSTA LTR MaLR 0 428 1 515 341 56 25 chr10 86860904 86861564 -53455201 + ERVL LTR ERVL 3989 4675 -1080 333 306 0 22 chr10 86862146 86862280 -53454485 + LTR16A LTR ERVL 20 150 -300 279 281 12 0 chr10 86862372 86862454 -53454311 + MER63 DNA MER1_type 979 1061 0 286 290 148 12 chr10 86862782 86862944 -53453821 - MIR SINE MIR 0 262 79 214 317 114 0 chr10 86862950 86863073 -53453692 + L2 LINE L2 2077 2213 -1101 1213 236 98 14 chr10 86863079 86863435 -53453330 - MLT1F LTR MaLR -4 538 153 1205 259 48 20 chr10 86863443 86863795 -53452970 + MLT2D LTR ERVL 5 366 -48 502 327 0 0 chr10 86863896 86864049 -53452716 - MLT1F LTR MaLR -389 153 1 776 306 47 49 chr10 86864049 86864435 -53452330 + L2 LINE L2 2216 2600 -714 1526 235 96 32 chr10 86865289 86865821 -53450944 - MLT1F1 LTR MaLR 0 567 2 587 327 62 0 chr10 86866026 86866237 -53450528 + MIR SINE MIR 13 236 -26 252 100 0 0 chr10 86866241 86866281 -53450484 + (TTA)n Simple_repeat Simple_repeat 3 42 0 229 300 17 0 chr10 86866362 86866422 -53450343 - L2 LINE L2 -43 3270 3210 1130 228 22 4 chr10 86866593 86866865 -53449900 + AluJo SINE Alu 1 277 -35 291 160 0 0 chr10 86867977 86868027 -53448738 - L1MC3 LINE L1 -1216 6569 6520 1067 157 11 16 chr10 86868029 86868214 -53448551 + MER4D LTR ERV1 1 184 -688 * 2688 168 102 4 chr10 86868210 86868739 -53448026 + MER4D LTR ERV1 323 903 0 2948 228 40 40 chr10 86868743 86869090 -53447675 - L1MC3 LINE L1 -1268 6517 6171 252 0 0 0 chr10 86869090 86869118 -53447647 + (TA)n Simple_repeat Simple_repeat 2 29 0 2948 228 40 40 chr10 86869118 86869427 -53447338 - L1MC3 LINE L1 -1614 6171 5858 2065 133 3 7 chr10 86869427 86869729 -53447036 + AluY SINE Alu 1 301 -10 2948 228 40 40 chr10 86869729 86869996 -53446769 - L1MC3 LINE L1 -1926 5859 5593 892 197 155 48 chr10 86870007 86870297 -53446468 + MLT1A1 LTR MaLR 1 321 -44 417 243 28 21 chr10 86870302 86870455 -53446310 - L1 LINE L1 -2510 3636 3483 438 165 0 44 chr10 86870709 86870800 -53445965 - MER88 LTR ERVL -377 87 1 2215 192 140 18 chr10 86870838 86871459 -53445306 + MER44D DNA MER2_type 32 600 -5 3726 145 19 12 chr10 86871542 86872190 -53444575 - MER39B LTR ERV1 0 653 2 254 395 37 16 chr10 86872259 86872449 -53444316 - MIR SINE MIR -48 214 21 1890 253 64 39 chr10 86873150 86873819 -53442946 - MER76 LTR ERV 0 688 3 23 86 0 0 chr10 86874013 86874071 -53442694 + AT_rich Low_complexity Low_complexity 1 58 0 195 215 0 76 chr10 86874294 86874373 -53442392 + L2 LINE L2 3134 3206 -107 301 225 13 172 chr10 86874475 86874626 -53442139 + L2 LINE L2 3187 3313 0 1401 226 54 43 chr10 86874930 86875390 -53441375 + MER31B LTR ERV1 2 466 0 232 305 45 60 chr10 86875894 86876225 -53440540 - L1M4 LINE L1 -1789 4357 4032 2081 240 37 75 chr10 86876978 86877450 -53439315 + MER21B LTR ERV1 1 434 -429 1608 148 62 54 chr10 86877450 86877822 -53438943 + THE1C LTR MaLR 1 375 0 2081 240 37 75 chr10 86877822 86878128 -53438637 + MER21B LTR ERV1 434 750 -113 8621 24 4 1 chr10 86878801 86879863 -53436902 - L1P LINE L1 -1132 5014 3950 302 285 6 89 chr10 86879898 86880056 -53436709 - L1M4 LINE L1 -2204 3942 3798 2483 79 0 0 chr10 86880089 86880394 -53436371 - AluY SINE Alu -6 305 1 281 322 0 0 chr10 86881252 86881339 -53435426 - L2 LINE L2 -1636 1678 1592 359 390 13 13 chr10 86881521 86881749 -53435016 - L2 LINE L2 -2370 944 717 690 298 84 50 chr10 86881757 86882140 -53434625 + L2 LINE L2 2397 2792 -522 646 333 84 29 chr10 86882411 86882790 -53433975 - LTR16B LTR ERVL -21 443 44 5040 94 9 0 chr10 86882935 86883691 -53433074 - L1P3 LINE L1 -1740 4406 3644 * 5732 95 3 57 chr10 86883688 86884001 -53432764 + L1P3 LINE L1 4416 4744 -1428 207 0 0 0 chr10 86884001 86884024 -53432741 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5732 95 3 57 chr10 86884024 86885021 -53431744 + L1P3 LINE L1 4744 5673 -499 689 120 0 9 chr10 86985023 86985131 -53331634 - MSTA LTR MaLR -321 107 1 598 243 35 0 chr10 86985131 86985300 -53331465 - L1M4 LINE L1 -1298 5084 4910 2442 264 62 32 chr10 86985303 86986451 -53330314 - L1M4 LINE L1 -4521 1792 805 292 286 12 2 chr10 86986800 86986901 -53329864 - L1M4 LINE L1 -5813 490 33 1739 191 0 13 chr10 86986904 86987218 -53329547 - AluJo SINE Alu 0 312 3 935 237 12 93 chr10 86987221 86987569 -53329196 - L1M4 LINE L1 -978 5168 4856 2199 112 0 7 chr10 86987569 86987907 -53328858 - AluSx SINE Alu 0 336 1 935 237 12 93 chr10 86987907 86987973 -53328792 - L1M4 LINE L1 -1290 4856 4786 1384 222 48 17 chr10 86989222 86989578 -53327187 - MER39 LTR ERV1 -17 690 324 538 59 47 0 chr10 86990773 86990858 -53325907 + CT-rich Low_complexity Low_complexity 2 90 0 1458 181 62 28 chr10 86990858 86991146 -53325619 - AluJb SINE Alu -14 298 1 279 114 0 0 chr10 86991303 86991347 -53325418 + (CA)n Simple_repeat Simple_repeat 2 45 0 1524 192 42 0 chr10 86992724 86992741 -53324024 - AluJb SINE Alu -13 299 284 405 0 0 0 chr10 86992741 86992786 -53323979 + (GTTTG)n Simple_repeat Simple_repeat 1 45 0 1524 192 42 0 chr10 86992786 86993055 -53323710 - AluJb SINE Alu -28 284 1 1886 191 27 50 chr10 86993233 86993673 -53323092 + MLT1C LTR MaLR 38 467 0 2618 147 40 17 chr10 86993978 86994449 -53322316 - MER31A LTR ERV1 -3 482 1 331 211 256 0 chr10 86994521 86994611 -53322154 - AluJ SINE Alu -8 294 182 1277 149 0 10 chr10 86994651 86994845 -53321920 - AluJ SINE Alu -120 192 1 1165 234 26 92 chr10 86995741 86996287 -53320478 - MER67D LTR ERV1 -4 510 1 280 337 110 0 chr10 86996291 86996454 -53320311 - MIR SINE MIR -15 247 67 1821 152 14 28 chr10 86996462 86996751 -53320014 - AluJo SINE Alu -23 289 5 1717 209 79 8 chr10 86997488 86997856 -53318909 - MER39 LTR ERV1 -140 567 174 24 0 0 0 chr10 86998053 86998077 -53318688 + AT_rich Low_complexity Low_complexity 1 24 0 4441 171 14 48 chr10 86998196 86999123 -53317642 + MER4D LTR ERV1 1 896 -7 22 0 0 0 chr10 86999126 86999148 -53317617 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 86999240 86999264 -53317501 + AT_rich Low_complexity Low_complexity 1 24 0 444 314 78 29 chr10 86999553 86999795 -53316970 - MLT1J2 LTR MaLR -23 427 174 248 234 0 31 chr10 87000200 87000264 -53316501 + L1MC5 LINE L1 7852 7913 -48 23 0 0 0 chr10 87000264 87000287 -53316478 + AT_rich Low_complexity Low_complexity 1 23 0 489 350 32 0 chr10 87000287 87000473 -53316292 + MIR SINE MIR 34 225 -37 338 302 58 53 chr10 87000740 87000965 -53315800 - L1MEd LINE L1 -5880 239 14 226 193 18 0 chr10 87001372 87001429 -53315336 - L1MCa LINE L1 -4362 2064 2007 254 319 62 26 chr10 87001544 87001657 -53315108 - L2 LINE L2 -1362 1952 1836 236 264 15 117 chr10 87001701 87001898 -53314867 + L2 LINE L2 2260 2436 -878 466 180 0 98 chr10 87002880 87003002 -53313763 + FLAM_C SINE Alu 1 110 -33 291 140 0 0 chr10 87003008 87003058 -53313707 + (GA)n Simple_repeat Simple_repeat 1 50 0 180 111 0 0 chr10 87003667 87003694 -53313071 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 282 36 0 91 chr10 87003770 87003825 -53312940 + L1MA9 LINE L1 6262 6311 -1 3581 133 8 48 chr10 87003834 87004478 -53312287 - L1PA15 LINE L1 -3 6162 5545 3263 201 21 0 chr10 87004478 87005155 -53311610 - L1PA15 LINE L1 -987 5159 4469 24 32 0 0 chr10 87005656 87005687 -53311078 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr10 87005761 87005784 -53310981 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1742 168 18 34 chr10 87005898 87006279 -53310486 - THE1C LTR MaLR 0 375 1 181 198 69 0 chr10 87006281 87006397 -53310368 + (TA)n Simple_repeat Simple_repeat 1 124 0 475 279 29 64 chr10 87006448 87006517 -53310248 + MIR SINE MIR 8 78 -184 3189 91 39 0 chr10 87006517 87007001 -53309764 - L1MA2 LINE L1 0 6304 5802 475 279 29 64 chr10 87007001 87007190 -53309575 + MIR SINE MIR 78 254 -8 616 317 70 8 chr10 87007229 87007472 -53309293 + MIR SINE MIR 5 262 0 262 336 64 9 chr10 87007578 87007688 -53309077 + MIR3 SINE MIR 41 156 -52 1592 220 66 54 chr10 87008085 87008584 -53308181 - MLT1D LTR MaLR 0 505 1 814 205 39 154 chr10 87008592 87008848 -53307917 + L1MC/D LINE L1 5099 5246 -1113 2093 135 0 0 chr10 87008848 87009145 -53307620 + AluSx SINE Alu 1 297 -15 814 205 39 154 chr10 87009145 87009521 -53307244 + L1MC/D LINE L1 5246 5664 -695 * 1317 256 50 42 chr10 87009519 87010000 -53306765 + L1MB7 LINE L1 733 1217 -5325 929 236 10 0 chr10 87010002 87010197 -53306568 + AluJo SINE Alu 72 268 -44 1315 265 49 52 chr10 87010255 87010809 -53305956 + L1MB7 LINE L1 1458 2009 -4637 6257 222 49 18 chr10 87010828 87013542 -53303223 + L1MB7 LINE L1 3867 6660 -22 28 0 0 0 chr10 87014523 87014551 -53302214 + AT_rich Low_complexity Low_complexity 1 28 0 315 213 0 0 chr10 87015062 87015137 -53301628 + (TATATG)n Simple_repeat Simple_repeat 1 75 0 22 35 0 0 chr10 87016267 87016296 -53300469 + AT_rich Low_complexity Low_complexity 1 29 0 479 290 132 17 chr10 87016309 87016719 -53300046 + L1MC/D LINE L1 4061 4517 -1629 1299 185 39 0 chr10 87016731 87017017 -53299748 - L1MA7 LINE L1 -5 6110 5814 12223 230 50 14 chr10 87017156 87021801 -53294964 - L1MA7 LINE L1 -918 5052 87 653 257 78 27 chr10 87021858 87022154 -53294611 + L1MC/D LINE L1 4507 4817 -1329 237 301 86 11 chr10 87022375 87022561 -53294204 + L1ME3A LINE L1 5137 5336 -810 * 300 280 84 4 chr10 87022558 87022713 -53294052 + L1ME3A LINE L1 5985 6158 -8 198 216 21 62 chr10 87022759 87022856 -53293909 - MER5C DNA MER1_type -121 203 111 254 206 14 0 chr10 87022979 87023052 -53293713 + (TA)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr10 87023150 87023173 -53293592 + AT_rich Low_complexity Low_complexity 1 23 0 253 264 101 17 chr10 87023583 87023761 -53293004 + L1MC/D LINE L1 4798 4990 -1156 282 366 31 0 chr10 87024361 87024552 -53292213 + L1MC/D LINE L1 5657 5853 -1955 360 275 58 8 chr10 87025964 87026084 -53290681 + MIR SINE MIR 63 188 -74 269 273 110 15 chr10 87026306 87026439 -53290326 - MER20 DNA MER1_type 0 219 71 2056 125 3 0 chr10 87026480 87026769 -53289996 + AluSx SINE Alu 11 300 -12 2659 157 118 84 chr10 87026864 87027400 -53289365 - LTR8A LTR ERV1 0 727 160 1958 153 0 3 chr10 87027400 87027701 -53289064 + AluSx SINE Alu 1 300 -12 2659 157 118 84 chr10 87027701 87027867 -53288898 - LTR8A LTR ERV1 -567 160 1 3367 133 56 2 chr10 87029470 87030025 -53286740 - LTR29 LTR ERV1 -20 602 18 1456 279 147 31 chr10 87030402 87031043 -53285722 + MER50 LTR ERV1 1 715 -19 411 208 0 20 chr10 87031016 87031117 -53285648 - MER34C LTR ERV1 -31 554 456 * 2011 120 83 8 chr10 87031117 87031492 -53285273 - LTR7 LTR ERV1 0 450 1 1211 213 196 11 chr10 87031582 87031944 -53284821 - MER34C LTR ERV1 -156 429 1 2138 137 42 101 chr10 87032030 87032691 -53284074 - MER4A LTR ERV1 0 465 1 23 0 0 0 chr10 87033497 87033520 -53283245 + AT_rich Low_complexity Low_complexity 1 23 0 1923 203 49 88 chr10 87033575 87034245 -53282520 + LTR48B LTR ERV1 1 644 0 2849 147 16 56 chr10 87034297 87034537 -53282228 - MER41E LTR ERV1 0 512 303 4682 103 11 0 chr10 87034537 87035190 -53281575 + PABL_A LTR ERV1 1 660 0 2849 147 16 56 chr10 87035190 87035465 -53281300 - MER41E LTR ERV1 -209 303 18 2139 167 37 36 chr10 87035537 87036558 -53280207 + PABL_A-int LTR ERV1 65 1591 -3289 2510 192 14 32 chr10 87036667 87037173 -53279592 + LTR31 LTR ERV1 108 604 -15 413 215 0 11 chr10 87037183 87037276 -53279489 + LTR48B-int LTR ERV1 898 989 -5342 182 152 0 43 chr10 87037277 87037323 -53279442 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 611 271 41 18 chr10 87037356 87037526 -53279239 + LTR48B-int LTR ERV1 1116 1289 -5042 204 40 0 0 chr10 87038157 87038182 -53278583 + (CCA)n Simple_repeat Simple_repeat 3 27 0 2928 71 0 5 chr10 87038252 87038631 -53278134 + MLT2A1 LTR ERVL 1 377 -67 183 156 0 0 chr10 87038747 87038779 -53277986 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 379 248 24 107 chr10 87038782 87038988 -53277777 + LTR48B-int LTR ERV1 1681 1869 -4462 541 281 15 36 chr10 87039096 87039292 -53277473 + LTR48B-int LTR ERV1 1909 2100 -4231 750 198 33 55 chr10 87039304 87039742 -53277023 + LTR48B-int LTR ERV1 1154 3129 -3202 7744 218 70 63 chr10 87039751 87041265 -53275500 + LTR48B-int LTR ERV1 1680 3183 -3148 14893 35 7 2 chr10 87041265 87043844 -53272921 + L1PA4 LINE L1 3566 6155 0 7744 218 70 63 chr10 87043844 87045343 -53271422 + LTR48B-int LTR ERV1 3183 6175 -156 1450 240 100 46 chr10 87045441 87046049 -53270716 + LTR48B LTR ERV1 1 641 -3 1168 275 156 32 chr10 87046252 87046280 -53270485 + LTR8 LTR ERV1 1 24 -667 3726 142 10 23 chr10 87046280 87046900 -53269865 - LTR9 LTR ERV1 0 612 1 1168 275 156 32 chr10 87046900 87047486 -53269279 + LTR8 LTR ERV1 24 691 0 22 0 0 0 chr10 87047545 87047567 -53269198 + AT_rich Low_complexity Low_complexity 1 22 0 2235 119 0 3 chr10 87048098 87048410 -53268355 - AluSx SINE Alu -1 311 1 3557 176 84 24 chr10 87048874 87050140 -53266625 + L1ME1 LINE L1 4759 6095 -71 668 280 39 40 chr10 87050142 87050316 -53266449 + L1MEc LINE L1 1551 1724 -4839 210 37 0 0 chr10 87050316 87050343 -53266422 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 668 280 39 40 chr10 87050343 87050573 -53266192 + L1MEc LINE L1 1724 2113 -4450 409 288 91 101 chr10 87050596 87051159 -53265606 + L1MEc LINE L1 1898 2454 -4109 1059 248 114 2 chr10 87051165 87051628 -53265137 + L1MEc LINE L1 2727 3241 -3141 345 259 31 77 chr10 87051658 87051917 -53264848 + L1MEc LINE L1 3457 3703 -2679 922 219 18 44 chr10 87051920 87052148 -53264617 + AluJo SINE Alu 11 232 -80 189 0 0 0 chr10 87052148 87052169 -53264596 + (A)n Simple_repeat Simple_repeat 1 21 0 1818 264 43 35 chr10 87052169 87052909 -53263856 + L1MEc LINE L1 3673 4418 -1964 1241 238 11 37 chr10 87052902 87053251 -53263514 + L1MB8 LINE L1 5820 6159 -19 * 30 0 0 0 chr10 87053260 87053290 -53263475 + AT_rich Low_complexity Low_complexity 1 30 0 981 105 8 0 chr10 87053298 87053431 -53263334 + AluSq/x SINE Alu 1 134 -179 2059 113 0 0 chr10 87053431 87053713 -53263052 + AluSx SINE Alu 1 282 -30 521 220 88 0 chr10 87053816 87053998 -53262767 + AluSg/x SINE Alu 87 284 -25 222 91 0 0 chr10 87054679 87054712 -53262053 + (TCTA)n Simple_repeat Simple_repeat 1 33 0 194 174 22 0 chr10 87054898 87054944 -53261821 + (TA)n Simple_repeat Simple_repeat 1 47 0 537 164 45 18 chr10 87054996 87055106 -53261659 - L1MB1 LINE L1 -23 6145 6033 1287 190 13 43 chr10 87055615 87055915 -53260850 - AluJo SINE Alu -19 293 3 210 71 0 0 chr10 87056206 87056234 -53260531 + (A)n Simple_repeat Simple_repeat 1 28 0 267 236 0 0 chr10 87056399 87056471 -53260294 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 2457 68 0 0 chr10 87056940 87057247 -53259518 + AluY SINE Alu 1 307 -4 1831 158 7 10 chr10 87057372 87057675 -53259090 + AluSx SINE Alu 1 302 -10 315 0 0 0 chr10 87057676 87057711 -53259054 + (CA)n Simple_repeat Simple_repeat 2 36 0 353 354 10 14 chr10 87057912 87058121 -53258644 + L1ME LINE L1 75 282 -5788 776 187 15 0 chr10 87058755 87058889 -53257876 - AluJo SINE Alu -176 136 1 3999 135 64 29 chr10 87060576 87061324 -53255441 + LTR1 LTR ERV1 12 785 0 943 303 46 26 chr10 87061385 87061735 -53255030 + MLT1I LTR MaLR 47 403 -6 1426 179 26 77 chr10 87061886 87062026 -53254739 + AluJo SINE Alu 1 147 -165 1916 134 3 34 chr10 87062026 87062346 -53254419 + AluSx SINE Alu 1 310 -2 1426 179 26 77 chr10 87062346 87062518 -53254247 + AluJo SINE Alu 147 297 -15 6276 76 17 1 chr10 87064392 87065205 -53251560 + LTR12 LTR ERV1 1 826 0 9046 102 13 11 chr10 87065229 87066537 -53250228 + HERV9 LTR ERV1 58 1367 -7032 585 62 0 12 chr10 87066538 87066619 -53250146 + HERV9 LTR ERV1 1661 1740 -5156 * 3313 100 0 2 chr10 87066617 87067076 -53249689 + HERV9 LTR ERV1 7626 8083 -316 243 0 0 0 chr10 87067120 87067147 -53249618 + (CA)n Simple_repeat Simple_repeat 2 28 0 367 219 36 0 chr10 87067151 87067288 -53249477 + (TA)n Simple_repeat Simple_repeat 1 142 0 1081 252 50 73 chr10 87067318 87067882 -53248883 + L1MC3 LINE L1 646 1196 -4849 8724 201 11 19 chr10 87067960 87070369 -53246396 + L1M1 LINE L1 1802 6162 -558 6404 125 13 35 chr10 87070565 87071788 -53244977 + L1MA1 LINE L1 5101 6295 -7 21 36 0 0 chr10 87071788 87071816 -53244949 + AT_rich Low_complexity Low_complexity 1 28 0 7801 231 70 61 chr10 87071820 87077014 -53239751 + L1MC3 LINE L1 1951 7202 -1001 2258 66 0 0 chr10 87077014 87077288 -53239477 + AluSc SINE Alu 35 308 -1 7801 231 70 61 chr10 87077288 87078128 -53238637 + L1MC3 LINE L1 7202 8033 -170 327 279 56 82 chr10 87079344 87079509 -53237256 + L1MEc LINE L1 1666 1823 -4717 1387 197 34 96 chr10 87079509 87079925 -53236840 + MLT1B LTR MaLR 1 390 0 327 279 56 82 chr10 87079925 87080028 -53236737 + L1MEc LINE L1 1823 1927 -4613 21 0 0 0 chr10 87080558 87080579 -53236186 + AT_rich Low_complexity Low_complexity 1 21 0 334 330 15 25 chr10 87080581 87080784 -53235981 + L1MDa LINE L1 3506 3706 -2834 2052 179 53 27 chr10 87080784 87081197 -53235568 + MSTB1 LTR MaLR 9 432 0 1686 238 77 72 chr10 87081246 87082304 -53234461 + L1M4 LINE L1 4236 5298 -848 2200 258 89 16 chr10 87082404 87083695 -53233070 + L1MEc LINE L1 2006 3366 -3174 1190 234 62 39 chr10 87083707 87084139 -53232626 + L1M4 LINE L1 4755 5196 -950 2486 228 64 132 chr10 87085809 87086041 -53230724 + L1MDa LINE L1 1 247 -6293 282 29 0 0 chr10 87086041 87086076 -53230689 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2486 228 64 132 chr10 87086076 87086097 -53230668 + L1MDa LINE L1 247 268 -6272 1536 209 0 3 chr10 87086097 87086379 -53230386 - AluJb SINE Alu -31 281 1 2486 228 64 132 chr10 87086379 87087312 -53229453 + L1MDa LINE L1 268 1107 -5433 927 142 7 7 chr10 87087420 87087568 -53229197 + MSTA LTR MaLR 256 403 -25 540 69 14 0 chr10 87087566 87087638 -53229127 + MSTA LTR MaLR 355 427 -1 * 4174 193 17 46 chr10 87087643 87088329 -53228436 + L1MB2 LINE L1 4848 5478 -693 294 29 0 0 chr10 87088329 87088364 -53228401 + (CA)n Simple_repeat Simple_repeat 2 36 0 4174 193 17 46 chr10 87088364 87089040 -53227725 + L1MB2 LINE L1 5478 6171 0 4040 169 34 31 chr10 87089036 87089808 -53226957 + L1MC2 LINE L1 5152 5925 -419 * 12327 146 51 49 chr10 87089808 87092219 -53224546 - Tigger1 DNA MER2_type 0 2418 3 4040 169 34 31 chr10 87092219 87092352 -53224413 + L1MC2 LINE L1 5925 6056 -288 1905 121 14 4 chr10 87092353 87092654 -53224111 - AluSq SINE Alu 0 304 1 273 77 26 0 chr10 87092654 87092693 -53224072 + Tigger4(Zombi) DNA MER2_type 2692 2731 0 426 267 25 0 chr10 87092693 87092813 -53223952 + L1MD1 LINE L1 6114 6236 -6 227 393 56 9 chr10 87093232 87093339 -53223426 + L2 LINE L2 3150 3261 -11 183 324 129 43 chr10 87093336 87093475 -53223290 - L2 LINE L2 -1414 1900 1750 * 244 253 35 35 chr10 87095251 87095338 -53221427 + L2 LINE L2 3215 3301 -12 3865 158 24 14 chr10 87095433 87096137 -53220628 + MER50 LTR ERV1 1 711 -23 870 144 0 0 chr10 87096736 87096868 -53219897 + FLAM_C SINE Alu 2 133 0 4314 94 72 45 chr10 87097139 87097852 -53218913 + SVA Other Other 655 1386 0 1906 113 0 4 chr10 87098670 87098936 -53217829 - AluSq SINE Alu -16 297 33 2109 206 16 19 chr10 87100203 87100636 -53216129 - MSTB1 LTR MaLR 0 432 1 238 226 16 16 chr10 87101948 87102010 -53214755 + MER3 DNA MER1_type 6 67 -142 331 269 0 0 chr10 87102324 87102402 -53214363 + L2 LINE L2 3186 3263 -9 192 40 0 0 chr10 87102523 87102548 -53214217 + (CA)n Simple_repeat Simple_repeat 2 26 0 523 204 9 0 chr10 87102581 87102694 -53214071 - Tigger1 DNA MER2_type -4 2414 2301 7388 193 54 90 chr10 87102697 87104962 -53211803 + L1M2 LINE L1 5 2189 -4660 1994 165 3 5 chr10 87104958 87105328 -53211437 + L1MA4A LINE L1 5903 6271 -32 * 23 54 0 0 chr10 87105337 87105374 -53211391 + AT_rich Low_complexity Low_complexity 1 37 0 12213 147 34 11 chr10 87105374 87107614 -53209151 - Tigger1 DNA MER2_type -101 2317 26 315 225 82 86 chr10 87107709 87107976 -53208789 + L1ME3A LINE L1 4457 4722 -1424 767 156 23 8 chr10 87107996 87108124 -53208641 + FLAM_C SINE Alu 1 130 -13 639 277 132 16 chr10 87108162 87109018 -53207747 + L1ME3A LINE L1 4760 5707 -463 283 231 69 0 chr10 87109021 87109181 -53207584 + (TA)n Simple_repeat Simple_repeat 2 172 0 258 156 0 0 chr10 87109193 87109238 -53207527 + (TA)n Simple_repeat Simple_repeat 2 46 0 1381 196 25 32 chr10 87109244 87109524 -53207241 - AluJo SINE Alu -34 278 1 1230 254 78 5 chr10 87109524 87109946 -53206819 + L1ME3A LINE L1 5700 6152 -18 457 318 85 53 chr10 87110861 87111265 -53205500 + L1M2 LINE L1 2901 3326 -3522 446 283 26 70 chr10 87111265 87111537 -53205228 - MIR SINE MIR 0 262 3 457 318 85 53 chr10 87111537 87111639 -53205126 + L1M2 LINE L1 3326 3423 -3425 26 30 0 0 chr10 87111849 87111882 -53204883 + AT_rich Low_complexity Low_complexity 1 33 0 34 0 0 0 chr10 87111952 87111986 -53204779 + AT_rich Low_complexity Low_complexity 1 34 0 403 246 135 62 chr10 87112013 87112223 -53204542 + L1ME4a LINE L1 5833 6065 -56 2109 121 6 16 chr10 87112223 87112536 -53204229 - AluSx SINE Alu -2 310 1 403 246 135 62 chr10 87112536 87112569 -53204196 + L1ME4a LINE L1 6065 6094 -27 403 289 95 55 chr10 87112697 87112950 -53203815 + L1ME2 LINE L1 5810 6072 -92 903 296 141 5 chr10 87112976 87113381 -53203384 + MLT1H LTR MaLR 89 548 -1 253 343 71 0 chr10 87113590 87113730 -53203035 + MER117 DNA MER1_type 6 155 -42 252 319 44 18 chr10 87113757 87113870 -53202895 - MIR3 SINE MIR -53 155 40 344 288 142 12 chr10 87115043 87115227 -53201538 + MIR SINE MIR 5 208 -54 234 286 82 61 chr10 87116232 87116330 -53200435 + MIR3 SINE MIR 101 200 -8 225 322 35 23 chr10 87116995 87117082 -53199683 + L2 LINE L2 2717 2804 -510 * 237 280 40 0 chr10 87117081 87117156 -53199609 + MIR SINE MIR 121 198 -64 288 287 119 30 chr10 87117528 87117730 -53199035 - MIR SINE MIR 0 262 43 2058 161 22 16 chr10 87120719 87121139 -53195626 - MER89 LTR ERV1 0 559 38 195 113 57 0 chr10 87121635 87121688 -53195077 + (TA)n Simple_repeat Simple_repeat 2 57 0 3165 83 4 28 chr10 87121702 87122162 -53194603 - L1PB2 LINE L1 -6 6145 5697 873 182 91 5 chr10 87122296 87122505 -53194260 - MER61E LTR ERV1 -4 565 339 229 222 0 97 chr10 87122607 87122679 -53194086 - MER61E LTR ERV1 -406 163 99 * 390 191 79 0 chr10 87122676 87122765 -53194000 - LTR25 LTR ERV1 -431 363 268 225 337 81 0 chr10 87123846 87123932 -53192833 + MIR SINE MIR 42 134 -74 2455 63 3 0 chr10 87123958 87124257 -53192508 - AluY SINE Alu -11 300 1 22 56 0 0 chr10 87125025 87125061 -53191704 + AT_rich Low_complexity Low_complexity 1 36 0 3450 223 32 82 chr10 87125105 87126598 -53190167 - L1MB7 LINE L1 0 6420 5056 2045 119 4 0 chr10 87126598 87126875 -53189890 - AluSp SINE Alu -2 311 34 3450 223 32 82 chr10 87126875 87127389 -53189376 - L1MB7 LINE L1 -1364 5056 4518 1987 273 45 30 chr10 87127582 87128328 -53188437 - L1MB7 LINE L1 -4610 1774 1008 1975 161 135 5 chr10 87128328 87128707 -53188058 - MSTA LTR MaLR 0 428 1 1987 273 45 30 chr10 87128707 87128905 -53187860 - L1MB7 LINE L1 -5376 1008 815 210 91 0 0 chr10 87128909 87128942 -53187823 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 883 217 56 106 chr10 87128967 87129428 -53187337 + LTR8A LTR ERV1 290 727 0 384 311 149 63 chr10 87129430 87129807 -53186958 + L2 LINE L2 2197 2623 -691 2114 155 12 54 chr10 87129807 87130214 -53186551 - MLT1B LTR MaLR 0 390 1 384 311 149 63 chr10 87130214 87130299 -53186466 + L2 LINE L2 2623 2699 -615 212 333 40 83 chr10 87130404 87130632 -53186133 + MIR SINE MIR 2 219 -43 1890 200 146 26 chr10 87130779 87131613 -53185152 - L1MD3 LINE L1 -743 5403 5017 253 290 0 0 chr10 87131629 87131691 -53185074 + L2 LINE L2 3015 3076 -196 22 0 0 0 chr10 87132502 87132524 -53184241 + AT_rich Low_complexity Low_complexity 1 22 0 2204 117 0 0 chr10 87132524 87132814 -53183951 - AluSx SINE Alu -22 290 1 230 279 16 0 chr10 87133615 87133676 -53183089 - MER5A DNA MER1_type 0 189 128 645 235 112 0 chr10 87133745 87133915 -53182850 - MER5A DNA MER1_type 0 189 1 385 318 145 11 chr10 87135204 87135383 -53181382 - MIR SINE MIR -23 239 37 236 381 8 24 chr10 87135630 87135756 -53181009 + L2 LINE L2 3053 3176 -96 1215 247 25 29 chr10 87139309 87139799 -53176966 + L1MD1 LINE L1 2701 3188 -2958 3290 223 79 12 chr10 87139828 87141017 -53175748 + L1MD1 LINE L1 4842 5950 -292 14493 142 29 55 chr10 87141017 87141787 -53174978 + Tigger4(Zombi) DNA MER2_type 1 789 -1942 2189 117 0 10 chr10 87141787 87142094 -53174671 + AluSx SINE Alu 1 304 -8 14493 142 29 55 chr10 87142094 87143474 -53173291 + Tigger4(Zombi) DNA MER2_type 789 2203 -528 2226 115 7 7 chr10 87143474 87143769 -53172996 + AluSx SINE Alu 1 295 -17 14493 142 29 55 chr10 87143769 87144380 -53172385 + Tigger4(Zombi) DNA MER2_type 2203 2693 -38 2102 127 34 0 chr10 87144380 87144671 -53172094 - AluSx SINE Alu -11 301 1 14493 142 29 55 chr10 87144671 87144710 -53172055 + Tigger4(Zombi) DNA MER2_type 2693 2731 0 3290 223 79 12 chr10 87144710 87144830 -53171935 + L1MD1 LINE L1 5950 6236 -6 221 393 56 9 chr10 87145249 87145356 -53171409 + L2 LINE L2 3150 3261 -11 245 253 35 35 chr10 87147268 87147355 -53169410 + L2 LINE L2 3215 3301 -12 1896 176 39 10 chr10 87147450 87147860 -53168905 + MER50 LTR ERV1 1 422 -312 557 206 0 0 chr10 87148715 87148841 -53167924 - L1P LINE L1 -2684 3462 3337 571 181 26 9 chr10 87150060 87150176 -53166589 + FAM SINE Alu 55 172 -13 471 278 100 7 chr10 87150822 87151041 -53165724 + L1ME LINE L1 524 759 -5311 339 177 0 48 chr10 87151209 87151271 -53165494 + MLT1J2 LTR MaLR 57 115 -335 869 158 14 0 chr10 87151295 87151441 -53165324 + L1PB4 LINE L1 6008 6155 -1 22 56 0 0 chr10 87151713 87151749 -53165016 + AT_rich Low_complexity Low_complexity 1 36 0 411 274 75 65 chr10 87151831 87152152 -53164613 + L1M4 LINE L1 3034 3357 -2789 23 78 0 0 chr10 87152170 87152221 -53164544 + AT_rich Low_complexity Low_complexity 1 51 0 226 319 44 31 chr10 87152358 87152518 -53164247 + L1MC/D LINE L1 5688 5849 -1959 423 318 112 18 chr10 87153204 87153427 -53163338 - MIR SINE MIR -12 250 7 315 311 82 30 chr10 87153667 87153937 -53162828 - L2 LINE L2 -892 2422 2139 302 302 170 33 chr10 87153984 87154166 -53162599 + L3 LINE CR1 1298 1504 -73 180 339 28 78 chr10 87154654 87154834 -53161931 + L2 LINE L2 2890 3060 -212 324 0 0 0 chr10 87155119 87155155 -53161610 + (TG)n Simple_repeat Simple_repeat 1 36 0 201 351 39 0 chr10 87155563 87155640 -53161125 + MIR SINE MIR 110 189 -73 1953 137 7 7 chr10 87155651 87155944 -53160821 + AluSx SINE Alu 1 293 -19 1226 334 44 10 chr10 87156180 87156590 -53160175 - LTR16A LTR ERVL -2 448 25 21 57 0 0 chr10 87156720 87156755 -53160010 + AT_rich Low_complexity Low_complexity 1 35 0 339 317 90 14 chr10 87156845 87156990 -53159775 + MIR SINE MIR 50 205 -57 248 137 20 0 chr10 87157106 87157157 -53159608 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 392 52 35 0 chr10 87157158 87157216 -53159549 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 294 95 0 0 chr10 87157237 87157279 -53159486 + (CA)n Simple_repeat Simple_repeat 1 42 0 1616 332 9 45 chr10 87157282 87157851 -53158914 - MLT2B1 LTR ERVL -54 500 1 582 341 55 5 chr10 87158961 87159181 -53157584 - MIR SINE MIR -12 250 20 796 157 5 122 chr10 87159668 87159865 -53156900 + MER44D DNA MER2_type 1 444 -165 234 260 7 41 chr10 87159923 87160069 -53156696 + A-rich Low_complexity Low_complexity 2 142 0 218 79 0 26 chr10 87160252 87160290 -53156475 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 5064 155 39 29 chr10 87160291 87161092 -53155673 - L1PA16 LINE L1 -2 6164 5341 2242 112 0 3 chr10 87161092 87161396 -53155369 - AluSx SINE Alu -9 303 1 5064 155 39 29 chr10 87161396 87162112 -53154653 - L1PA16 LINE L1 -825 5341 4633 4826 251 45 76 chr10 87162105 87162965 -53153800 - L1PA12 LINE L1 -3553 4031 3146 * 243 0 0 0 chr10 87162965 87162992 -53153773 + (TG)n Simple_repeat Simple_repeat 2 28 0 4826 251 45 76 chr10 87162992 87164151 -53152614 - L1PA12 LINE L1 -4438 3146 1952 1748 151 94 23 chr10 87164151 87164501 -53152264 - THE1C LTR MaLR 0 375 1 4826 251 45 76 chr10 87164501 87166157 -53150608 - L1PA12 LINE L1 -5632 1952 9 954 179 28 0 chr10 87166160 87166339 -53150426 + MER44D DNA MER2_type 422 605 0 256 290 190 0 chr10 87166421 87166521 -53150244 - MIR SINE MIR -54 208 90 2317 152 31 21 chr10 87166756 87167178 -53149587 + MSTC LTR MaLR 1 426 -2 234 155 52 129 chr10 87168189 87168344 -53148421 - L1ME4a LINE L1 -53 6068 5926 419 349 6 6 chr10 87168355 87168530 -53148235 + (TATG)n Simple_repeat Simple_repeat 2 176 0 261 128 0 0 chr10 87168557 87168596 -53148169 - MSTC LTR MaLR -202 226 188 292 309 16 16 chr10 87168629 87168755 -53148010 + (TATG)n Simple_repeat Simple_repeat 3 128 0 1644 287 144 26 chr10 87168869 87169791 -53146974 - HAL1 LINE L1 -28 2479 1383 856 19 0 68 chr10 87169791 87169953 -53146812 + (TA)n Simple_repeat Simple_repeat 1 151 0 1644 287 144 26 chr10 87169953 87170220 -53146545 - HAL1 LINE L1 -1124 1383 1149 459 242 20 71 chr10 87170223 87170421 -53146344 - L1MEc LINE L1 -4781 2341 2154 728 263 26 5 chr10 87170515 87170709 -53146056 - MLT1F LTR MaLR 0 542 345 478 275 80 65 chr10 87170786 87170986 -53145779 - MLT1E LTR MaLR -339 203 1 759 325 42 15 chr10 87171099 87171499 -53145266 - L1MEc LINE L1 -5992 431 21 2038 130 0 3 chr10 87171759 87172059 -53144706 - AluSx SINE Alu -13 299 1 528 348 86 6 chr10 87172152 87172503 -53144262 - L1M4 LINE L1 -3381 2765 2387 728 220 11 16 chr10 87172637 87172828 -53143937 - L1M4c LINE L1 -1232 5725 5536 10145 153 14 6 chr10 87172831 87174442 -53142323 + Ricksha_c DNA DNA 8 1631 -415 309 77 0 0 chr10 87174442 87174481 -53142284 + Alu SINE Alu 1 39 -269 531 203 136 0 chr10 87174587 87174705 -53142060 - Ricksha DNA DNA -1912 134 1 476 250 8 0 chr10 87174705 87174829 -53141936 - L1M4c LINE L1 -1409 5548 5424 2663 264 62 33 chr10 87174847 87176049 -53140716 - L1M4c LINE L1 -1699 5258 4023 214 188 0 72 chr10 87176062 87176131 -53140634 + T-rich Low_complexity Low_complexity 4 67 0 1871 272 61 45 chr10 87176202 87177583 -53139182 - L1M4c LINE L1 -4309 2829 1285 245 29 29 0 chr10 87177583 87177617 -53139148 + (TTCTG)n Simple_repeat Simple_repeat 4 38 0 1871 272 61 45 chr10 87177617 87177686 -53139079 - L1M4c LINE L1 -5853 1285 1219 247 273 16 66 chr10 87177823 87177944 -53138821 - L1M4c LINE L1 -5918 937 823 30 0 0 0 chr10 87178216 87178246 -53138519 + AT_rich Low_complexity Low_complexity 1 30 0 236 335 42 12 chr10 87178298 87178465 -53138300 - HAL1 LINE L1 -1120 1387 1216 33 43 0 0 chr10 87179538 87179585 -53137180 + AT_rich Low_complexity Low_complexity 1 47 0 1196 217 31 38 chr10 87179999 87180418 -53136347 + MLT2B1 LTR ERVL 6 465 -50 193 20 41 61 chr10 87180435 87180484 -53136281 + (TA)n Simple_repeat Simple_repeat 1 48 0 236 136 91 0 chr10 87180506 87180550 -53136215 + MLT2B1 LTR ERVL 473 520 0 306 0 0 0 chr10 87181099 87181133 -53135632 + (TG)n Simple_repeat Simple_repeat 2 35 0 1370 219 146 33 chr10 87181139 87181536 -53135229 - MLT2B1 LTR ERVL -78 442 1 289 251 69 27 chr10 87181869 87181988 -53134777 - MIR SINE MIR -65 143 62 1083 157 6 0 chr10 87182024 87182202 -53134563 + L1MC1 LINE L1 6154 6332 -1 350 306 91 0 chr10 87183124 87183245 -53133520 - MIR SINE MIR -67 195 64 271 269 187 45 chr10 87183610 87183744 -53133021 - MIR SINE MIR -8 254 102 248 286 0 14 chr10 87184096 87184166 -53132599 + (TAA)n Simple_repeat Simple_repeat 2 70 0 26 0 0 0 chr10 87185143 87185169 -53131596 + AT_rich Low_complexity Low_complexity 1 26 0 232 327 39 0 chr10 87185401 87185505 -53131260 - L3 LINE CR1 -197 1380 1273 1870 129 31 7 chr10 87185785 87186072 -53130693 - AluSq SINE Alu -19 294 1 295 337 84 12 chr10 87186092 87186258 -53130507 - MIR SINE MIR -84 178 1 1762 181 17 15 chr10 87186908 87187273 -53129492 - MLT1A1 LTR MaLR 0 505 1 320 366 123 22 chr10 87187308 87187584 -53129181 - L2 LINE L2 0 3272 2969 906 290 137 7 chr10 87187703 87188148 -53128617 - LTR33A LTR ERVL -14 509 7 390 216 57 0 chr10 87188763 87188851 -53127914 + MER3 DNA MER1_type 117 209 0 303 253 72 17 chr10 87188880 87189004 -53127761 + MIR SINE MIR 28 155 -67 24 32 0 0 chr10 87189361 87189392 -53127373 + AT_rich Low_complexity Low_complexity 1 31 0 229 239 128 17 chr10 87189512 87189629 -53127136 - L1ME LINE L1 -218 5903 5774 837 234 25 30 chr10 87191202 87191399 -53125366 + MIR SINE MIR 28 223 -39 3695 170 40 28 chr10 87191940 87193307 -53123458 - L1MC2 LINE L1 -3 6341 4886 449 195 41 0 chr10 87193344 87193467 -53123298 + L1M4 LINE L1 4748 4875 -1271 2958 228 93 112 chr10 87194044 87195433 -53121332 - L1MDa LINE L1 -3367 3173 1759 1567 213 0 6 chr10 87195433 87195747 -53121018 + AluJo SINE Alu 1 312 0 2958 228 93 112 chr10 87195747 87196005 -53120760 - L1MDa LINE L1 -4781 1759 1 259 291 169 34 chr10 87197379 87197527 -53119238 - MER5A DNA MER1_type -1 188 21 * 269 305 168 23 chr10 87197399 87197530 -53119235 + MER5B DNA MER1_type 25 174 -4 260 161 49 49 chr10 87197807 87197888 -53118877 - LTR33A LTR ERVL -25 498 418 389 314 336 7 chr10 87197969 87198243 -53118522 - LTR50 LTR ERVL -300 495 132 446 286 0 0 chr10 87198284 87198389 -53118376 + MLT1F1 LTR MaLR 43 147 -420 332 304 15 114 chr10 87198414 87198615 -53118150 + MLT1F-int LTR MaLR 959 1139 -232 1343 239 93 27 chr10 87198855 87199352 -53117413 + MLT1F LTR MaLR 22 542 0 290 230 110 10 chr10 87199352 87199450 -53117315 - LTR50 LTR ERVL -682 113 6 1119 208 39 103 chr10 87199864 87200254 -53116511 + MLT1A1 LTR MaLR 1 365 0 542 117 0 0 chr10 87200309 87200403 -53116362 + L1MB3 LINE L1 6088 6181 -2 275 294 0 0 chr10 87200421 87200489 -53116276 - MIR SINE MIR -148 114 47 6019 235 107 8 chr10 87200520 87202039 -53114726 - L1M3c LINE L1 -4526 1615 1 720 54 0 0 chr10 87203292 87203385 -53113380 + (TTTC)n Simple_repeat Simple_repeat 1 93 0 315 224 178 9 chr10 87204799 87204906 -53111859 + MIR SINE MIR 52 176 -86 389 266 24 24 chr10 87204920 87205009 -53111756 - MIR SINE MIR -15 247 156 2473 195 70 6 chr10 87205009 87205526 -53111239 - MER44D DNA MER2_type 0 605 1 389 266 24 24 chr10 87205526 87205560 -53111205 - MIR SINE MIR -105 157 124 195 259 86 60 chr10 87205943 87206059 -53110706 - MIR SINE MIR -77 185 67 265 271 105 50 chr10 87207239 87207420 -53109345 + L2 LINE L2 3119 3309 -4 333 341 117 62 chr10 87207462 87208286 -53108479 - L2 LINE L2 0 3313 2428 1131 136 120 20 chr10 87208286 87208536 -53108229 - ORSL DNA AcHobo 0 275 1 333 341 117 62 chr10 87208536 87208695 -53108070 - L2 LINE L2 -885 2428 2279 226 302 79 30 chr10 87209030 87209232 -53107533 + MLT1K LTR MaLR 354 565 -23 335 325 98 12 chr10 87209271 87209434 -53107331 + MIR SINE MIR 86 262 0 287 311 148 22 chr10 87209869 87210004 -53106761 + L2 LINE L2 3121 3272 0 213 296 19 0 chr10 87210708 87210762 -53106003 - L2 LINE L2 -9 3263 3209 1721 164 79 108 chr10 87210913 87211394 -53105371 + MLT1C LTR MaLR 1 467 0 1330 172 51 25 chr10 87211593 87211907 -53104858 + MER33 DNA MER1_type 1 322 -2 457 298 135 53 chr10 87213121 87213595 -53103170 - L1ME4a LINE L1 -66 6055 5543 21 36 0 0 chr10 87213724 87213752 -53103013 + AT_rich Low_complexity Low_complexity 1 28 0 8244 29 6 0 chr10 87213763 87215534 -53101231 + L1PA3 LINE L1 4378 6162 0 228 182 0 0 chr10 87215556 87215600 -53101165 - L1P LINE L1 -769 5362 5319 556 275 115 42 chr10 87216058 87216371 -53100394 + L1ME4a LINE L1 5786 6121 0 1967 186 56 55 chr10 87217111 87217506 -53099259 + L1MB7 LINE L1 5587 5985 -199 249 33 0 0 chr10 87217506 87217536 -53099229 + (TG)n Simple_repeat Simple_repeat 2 31 0 1967 186 56 55 chr10 87217536 87217726 -53099039 + L1MB7 LINE L1 5985 6173 -11 216 0 0 0 chr10 87217752 87217776 -53098989 + (GA)n Simple_repeat Simple_repeat 2 25 0 2184 85 0 4 chr10 87217800 87218081 -53098684 - AluY SINE Alu -20 291 12 350 269 102 0 chr10 87219574 87219682 -53097083 - L2 LINE L2 0 3313 3195 280 326 35 38 chr10 87220590 87220777 -53095988 - MIR SINE MIR -45 217 33 2246 113 21 0 chr10 87220852 87221180 -53095585 - L1PA14 LINE L1 -2 6159 5825 191 277 59 67 chr10 87221552 87221671 -53095094 - MIR SINE MIR -58 204 87 288 0 0 0 chr10 87221795 87221827 -53094938 + (TG)n Simple_repeat Simple_repeat 2 33 0 181 139 47 0 chr10 87222209 87222252 -53094513 + (TATATG)n Simple_repeat Simple_repeat 6 50 0 1715 153 28 18 chr10 87222282 87222609 -53094156 - Tigger2a DNA MER2_type -104 330 1 2550 287 76 31 chr10 87222618 87224048 -53092717 - L2 LINE L2 -32 3281 1783 732 310 11 27 chr10 87224057 87224318 -53092447 + MIR SINE MIR 6 262 0 739 338 129 32 chr10 87225229 87226090 -53090675 - L2 LINE L2 -884 2430 1487 456 19 0 0 chr10 87226102 87226155 -53090610 + (GA)n Simple_repeat Simple_repeat 2 54 0 269 209 11 33 chr10 87226582 87226673 -53090092 + L1ME3A LINE L1 6077 6165 -5 315 297 58 32 chr10 87226870 87227213 -53089552 - L1M4 LINE L1 -2800 3346 2995 462 234 7 32 chr10 87227217 87227371 -53089394 - L1ME2 LINE L1 -9 6155 6006 1936 240 72 61 chr10 87227473 87228364 -53088401 - L1ME2 LINE L1 -9 6155 5255 701 250 55 88 chr10 87229028 87229222 -53087543 - L1ME2 LINE L1 -2732 3414 3215 324 83 0 0 chr10 87229222 87229270 -53087495 + (TG)n Simple_repeat Simple_repeat 1 48 0 701 250 55 88 chr10 87229270 87229846 -53086919 - L1ME2 LINE L1 -2931 3215 2670 21 0 0 0 chr10 87229880 87229901 -53086864 + AT_rich Low_complexity Low_complexity 1 21 0 928 193 6 6 chr10 87229999 87230160 -53086605 - FRAM SINE Alu -10 166 6 2228 136 38 20 chr10 87230417 87230867 -53085898 - L1M2 LINE L1 -591 5721 5264 562 213 24 52 chr10 87230871 87231082 -53085683 - L1M2 LINE L1 -1032 5114 4910 1135 128 10 57 chr10 87231781 87232077 -53084688 - L1P LINE L1 -2784 3362 3081 569 151 38 0 chr10 87232735 87232841 -53083924 - AluSq/x SINE Alu -203 110 1 361 269 19 0 chr10 87233182 87233290 -53083475 + L1MDa LINE L1 1 110 -6430 749 241 47 82 chr10 87233337 87233740 -53083025 + L1MDa LINE L1 97 485 -6055 249 220 0 0 chr10 87234558 87234608 -53082157 + Tigger1 DNA MER2_type 2 51 -2367 993 137 0 26 chr10 87234613 87234803 -53081962 - AluSp SINE Alu -11 302 118 186 176 0 0 chr10 87234815 87234866 -53081899 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 282 232 23 17 chr10 87235096 87235277 -53081488 + T-rich Low_complexity Low_complexity 1 182 0 285 239 32 39 chr10 87235371 87235526 -53081239 + CT-rich Low_complexity Low_complexity 2 155 0 1821 146 38 0 chr10 87236369 87236656 -53080109 + AluSx SINE Alu 1 298 -14 301 310 6 29 chr10 87236891 87237065 -53079700 + C-rich Low_complexity Low_complexity 1 170 0 268 179 45 9 chr10 87237109 87237221 -53079544 + C-rich Low_complexity Low_complexity 3 118 0 1616 172 72 38 chr10 87238522 87239056 -53077709 + MLT2A2 LTR ERVL 5 554 0 1259 211 56 7 chr10 87239676 87239961 -53076804 + L1MB8 LINE L1 5871 6169 -9 317 150 0 192 chr10 87239962 87240082 -53076683 - MER96B DNA MER1_type? -317 100 4 201 380 62 0 chr10 87240113 87240242 -53076523 - L2 LINE L2 -559 2755 2619 272 304 89 45 chr10 87240484 87240745 -53076020 + L2 LINE L2 2720 2989 -283 4788 141 43 22 chr10 87240856 87240960 -53075805 + L1P3 LINE L1 309 409 -6052 330 0 19 39 chr10 87240960 87241012 -53075753 + (TTG)n Simple_repeat Simple_repeat 2 52 0 4788 141 43 22 chr10 87241012 87241864 -53074901 + L1P3 LINE L1 409 1285 -5176 6773 111 34 32 chr10 87243938 87245302 -53071463 + L1P LINE L1 4056 5423 -740 220 320 80 0 chr10 87246744 87246844 -53069921 - MIR3 SINE MIR -1 207 100 23 0 0 0 chr10 87246871 87246894 -53069871 + AT_rich Low_complexity Low_complexity 1 23 0 4778 136 52 34 chr10 87247432 87248430 -53068335 + Tigger3b DNA MER2_type 91 1106 -125 390 344 20 7 chr10 87248810 87248961 -53067804 + MER5B DNA MER1_type 23 175 -3 204 319 0 55 chr10 87249013 87249104 -53067661 - MER5A DNA MER1_type 0 189 104 * 248 282 177 33 chr10 87249025 87249157 -53067608 + MER5B DNA MER1_type 12 189 0 248 369 0 12 chr10 87249333 87249417 -53067348 + MIR SINE MIR 33 115 -93 219 302 42 36 chr10 87249903 87250054 -53066711 + MIR SINE MIR 16 164 -71 398 324 22 27 chr10 87250657 87250879 -53065886 - HAL1b LINE L1 -756 592 372 22 35 0 0 chr10 87251762 87251791 -53064974 + AT_rich Low_complexity Low_complexity 1 29 0 1445 197 19 44 chr10 87252604 87252919 -53063846 + AluJo SINE Alu 1 307 -5 664 261 0 42 chr10 87253178 87253343 -53063422 + MER58A DNA MER1_type 1 158 0 28 71 0 0 chr10 87254331 87254387 -53062378 + AT_rich Low_complexity Low_complexity 1 56 0 216 293 24 24 chr10 87254540 87254622 -53062143 - MIR3 SINE MIR -34 174 93 1428 114 170 3 chr10 87254997 87255303 -53061462 + L1P4 LINE L1 5254 5610 -564 290 255 12 56 chr10 87255506 87255667 -53061098 + CT-rich Low_complexity Low_complexity 3 156 0 1328 154 36 0 chr10 87255780 87256000 -53060765 - AluJb SINE Alu -82 230 3 233 115 0 58 chr10 87256336 87256388 -53060377 + (T)n Simple_repeat Simple_repeat 1 49 0 965 233 3 35 chr10 87257380 87257663 -53059102 - AluJo SINE Alu -34 278 5 211 280 172 0 chr10 87257998 87258091 -53058674 - MIR3 SINE MIR -33 175 67 2227 93 0 0 chr10 87258845 87259135 -53057630 + AluSq SINE Alu 19 308 -5 1662 151 3 55 chr10 87260703 87260994 -53055771 - AluSx SINE Alu -36 276 1 973 315 54 68 chr10 87261780 87262560 -53054205 - ERVL-E LTR ERVL -4210 1554 786 374 338 91 5 chr10 87262560 87262646 -53054119 - ERVL-E LTR ERVL -4973 681 604 1541 189 15 0 chr10 87262646 87262911 -53053854 + AluJo SINE Alu 1 269 -43 374 338 91 5 chr10 87262911 87263163 -53053602 - ERVL-E LTR ERVL -5050 604 296 5698 126 13 24 chr10 87263391 87264304 -53052461 - MER4D LTR ERV1 0 903 1 1058 270 56 22 chr10 87264344 87264700 -53052065 - MLT2E LTR ERVL 0 628 261 * 1269 260 118 11 chr10 87264692 87265071 -53051694 + MLT1G1 LTR MaLR 128 547 -48 593 232 113 52 chr10 87265071 87265265 -53051500 - MER58C DNA MER1_type 0 215 10 233 266 0 0 chr10 87265272 87265330 -53051435 + MLT1G1 LTR MaLR 498 584 0 415 305 42 75 chr10 87265577 87265816 -53050949 - MIR SINE MIR -6 256 26 317 291 13 0 chr10 87266251 87266330 -53050435 + Tigger7 DNA MER2_type 1 80 -2407 * 1012 175 192 4 chr10 87266327 87266556 -53050209 - Tigger7 DNA MER2_type -2140 347 76 * 1773 160 27 15 chr10 87266554 87266886 -53049879 + Tigger7 DNA MER2_type 2143 2478 -9 249 277 142 82 chr10 87267574 87267856 -53048909 + MLT1I LTR MaLR 111 409 0 420 289 129 24 chr10 87268289 87268621 -53048144 - L1M4 LINE L1 -1479 4667 4301 1243 225 121 4 chr10 87268724 87269137 -53047628 + L1ME3 LINE L1 5688 6161 -9 272 170 40 70 chr10 87269155 87269255 -53047510 + L1ME3 LINE L1 5942 6038 -124 258 338 53 26 chr10 87269886 87270037 -53046728 + MIR SINE MIR 108 262 0 303 240 72 67 chr10 87270121 87270329 -53046436 + L1ME LINE L1 5542 5750 -371 433 335 57 10 chr10 87270337 87270531 -53046234 + L2 LINE L2 2847 3049 -264 504 243 27 0 chr10 87270531 87270642 -53046123 - L1M3f LINE L1 -5214 114 1 6043 245 38 30 chr10 87270642 87272709 -53044056 - L1M4 LINE L1 -849 5297 3215 292 160 0 0 chr10 87272703 87272753 -53044012 - L1MCa LINE L1 -6280 146 97 * 1367 215 54 0 chr10 87272767 87273083 -53043682 - L1MA4 LINE L1 -11 6289 5957 273 262 0 16 chr10 87273060 87273121 -53043644 - L1MCa LINE L1 -6360 66 7 * 448 168 56 0 chr10 87273102 87273227 -53043538 - L1MDa LINE L1 -4026 2514 2383 1147 183 103 26 chr10 87273244 87273362 -53043403 - L1MA9 LINE L1 -38 6274 6167 2413 86 0 13 chr10 87273362 87273675 -53043090 - AluY SINE Alu -2 309 1 1147 183 103 26 chr10 87273675 87273868 -53042897 - L1MA9 LINE L1 -145 6167 5939 * 1574 277 61 28 chr10 87273840 87274491 -53042274 - L1MDa LINE L1 -5268 1272 534 364 205 0 60 chr10 87274485 87274568 -53042197 - L1M3e LINE L1 -5121 1909 1832 * 2336 275 76 38 chr10 87274568 87275673 -53041092 - L1M3e LINE L1 -5878 1152 6 313 293 33 66 chr10 87275694 87275875 -53040890 - L1M4 LINE L1 -3317 3109 2935 1716 175 0 23 chr10 87276097 87276405 -53040360 - AluJo SINE Alu -11 301 1 569 301 88 13 chr10 87276954 87277193 -53039572 + MIR SINE MIR 6 262 0 1709 166 109 46 chr10 87278451 87278818 -53037947 + MLT1B LTR MaLR 1 390 0 757 311 12 12 chr10 87279829 87280083 -53036682 + MIR SINE MIR 9 262 0 300 245 41 31 chr10 87281965 87282063 -53034702 + MIR SINE MIR 56 154 -108 1410 172 86 11 chr10 87282786 87283054 -53033711 + AluJo SINE Alu 1 288 -24 1399 185 65 60 chr10 87283606 87283973 -53032792 + MLT1A2 LTR MaLR 4 372 -2 1702 198 73 43 chr10 87284790 87285280 -53031485 + MLT1D LTR MaLR 1 505 0 1812 154 13 89 chr10 87285455 87285850 -53030915 + MLT1A1 LTR MaLR 1 365 0 892 110 0 0 chr10 87286036 87286172 -53030593 - L1MA3 LINE L1 0 6305 6170 21 0 0 0 chr10 87286175 87286196 -53030569 + AT_rich Low_complexity Low_complexity 1 21 0 389 149 27 27 chr10 87286660 87286734 -53030031 - MLT1E1 LTR MaLR -401 253 180 1957 67 84 14 chr10 87286876 87287160 -53029605 - L1PA11 LINE L1 -4 6170 5867 2491 97 17 0 chr10 87287160 87287509 -53029256 + L1PA11 LINE L1 5493 5847 -327 2681 182 99 33 chr10 87287598 87287846 -53028919 - L1MC3 LINE L1 -1645 6140 5910 640 183 15 51 chr10 87287846 87287983 -53028782 - FLAM_C SINE Alu -1 132 1 2681 182 99 33 chr10 87287983 87288403 -53028362 - L1MC3 LINE L1 -1875 5910 5428 2206 80 0 0 chr10 87288417 87288692 -53028073 + AluY SINE Alu 22 296 -15 372 268 21 32 chr10 87288809 87289024 -53027741 - L1MCa LINE L1 -4799 1629 1413 210 200 0 0 chr10 87289434 87289469 -53027296 + MER91B DNA MER1_type 35 69 -121 204 283 0 0 chr10 87289892 87289945 -53026820 + MIR SINE MIR 210 262 0 239 389 35 0 chr10 87290790 87290903 -53025862 - MIR SINE MIR -109 153 37 219 319 49 40 chr10 87291542 87291698 -53025067 - MIR3 SINE MIR -29 179 20 232 192 0 19 chr10 87291736 87291788 -53024977 + T-rich Low_complexity Low_complexity 3 53 0 2063 148 7 0 chr10 87292089 87292399 -53024366 - AluJb SINE Alu 0 312 1 21 0 0 0 chr10 87293593 87293614 -53023151 + AT_rich Low_complexity Low_complexity 1 21 0 39 0 0 0 chr10 87294227 87294266 -53022499 + AT_rich Low_complexity Low_complexity 1 39 0 372 259 111 0 chr10 87294985 87295093 -53021672 + MIR3 SINE MIR 84 203 -5 38 68 0 0 chr10 87295163 87295236 -53021529 + AT_rich Low_complexity Low_complexity 1 73 0 1181 244 97 47 chr10 87295402 87295804 -53020961 - LTR41 LTR ERVL -344 429 8 189 0 0 0 chr10 87297171 87297192 -53019573 + (TG)n Simple_repeat Simple_repeat 1 21 0 213 400 15 7 chr10 87297868 87298003 -53018762 + MIR SINE MIR 51 186 -76 4462 144 32 35 chr10 87298788 87299316 -53017449 - L1MA9 LINE L1 0 6312 5785 2222 70 6 42 chr10 87299316 87299628 -53017137 - AluY SINE Alu -10 301 1 4462 144 32 35 chr10 87299628 87299911 -53016854 - L1MA9 LINE L1 -527 5785 5503 388 159 0 0 chr10 87299911 87299974 -53016791 + L1MA9 LINE L1 5414 5476 -692 308 307 197 0 chr10 87300083 87300220 -53016545 - MIR SINE MIR -36 226 63 349 304 18 0 chr10 87302200 87302312 -53014453 - MIR SINE MIR -109 153 40 241 273 40 10 chr10 87302376 87302475 -53014290 + CT-rich Low_complexity Low_complexity 3 104 0 562 238 14 27 chr10 87303466 87303613 -53013152 - MLT1G1 LTR MaLR 0 595 451 38 22 0 0 chr10 87303954 87303999 -53012766 + AT_rich Low_complexity Low_complexity 1 45 0 255 320 0 10 chr10 87304061 87304158 -53012607 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 245 143 0 20 chr10 87304245 87304294 -53012471 + (TG)n Simple_repeat Simple_repeat 1 48 0 26 0 0 0 chr10 87305388 87305414 -53011351 + AT_rich Low_complexity Low_complexity 1 26 0 623 343 83 44 chr10 87305862 87306066 -53010699 + L1ME3A LINE L1 1438 1633 -4763 2280 108 0 0 chr10 87306066 87306372 -53010393 + AluSq SINE Alu 1 306 -7 623 343 83 44 chr10 87306372 87306392 -53010373 + L1ME3A LINE L1 1633 1651 -4745 216 97 0 0 chr10 87306392 87306423 -53010342 + (CA)n Simple_repeat Simple_repeat 1 31 0 623 343 83 44 chr10 87306423 87306944 -53009821 + L1ME3A LINE L1 1651 2213 -4183 762 299 101 16 chr10 87306944 87307646 -53009119 + L1ME3A LINE L1 2179 2940 -3275 534 301 65 14 chr10 87307736 87308012 -53008753 + L1ME3A LINE L1 4873 5162 -1053 777 178 138 0 chr10 87308014 87308166 -53008599 + AluSg/x SINE Alu 128 300 -12 1093 242 150 37 chr10 87308339 87308987 -53007778 + L1ME3A LINE L1 5369 6089 -150 255 196 0 0 chr10 87308992 87309048 -53007717 + L1ME3A LINE L1 6158 6213 -26 5516 132 9 35 chr10 87310243 87311154 -53005611 - MER49 LTR ERV1 -33 890 4 411 239 239 17 chr10 87312375 87312555 -53004210 - MIR SINE MIR -10 252 33 461 336 0 0 chr10 87314943 87315068 -53001697 - MIR SINE MIR -90 172 48 344 356 7 7 chr10 87316160 87316219 -53000546 + (TG)n Simple_repeat Simple_repeat 1 59 -90 189 74 0 0 chr10 87316219 87316246 -53000519 + (CATG)n Simple_repeat Simple_repeat 2 28 0 344 356 7 7 chr10 87316246 87316335 -53000430 + (TG)n Simple_repeat Simple_repeat 58 149 0 21 57 0 0 chr10 87316940 87316975 -52999790 + AT_rich Low_complexity Low_complexity 1 35 0 195 319 19 38 chr10 87317068 87317228 -52999537 + L2 LINE L2 2818 2974 -339 2845 173 129 0 chr10 87317498 87318087 -52998678 + LTR51 LTR ERV1 3 667 -4 2280 222 25 61 chr10 87318260 87318367 -52998398 + LTR9 LTR ERV1 8 117 -495 1535 94 0 0 chr10 87318367 87318558 -52998207 - AluSq SINE Alu -18 295 105 2280 222 25 61 chr10 87318558 87319077 -52997688 + LTR9 LTR ERV1 117 612 0 757 241 113 80 chr10 87319782 87320321 -52996444 + MER34B LTR ERV1 6 562 -3 228 235 0 0 chr10 87320411 87320462 -52996303 - L2 LINE L2 -85 3187 3137 2003 207 45 68 chr10 87320632 87321279 -52995486 - MER92B LTR ERV1 -4 632 1 266 298 46 23 chr10 87321280 87321411 -52995354 + MIR SINE MIR 114 247 -15 298 389 0 15 chr10 87322304 87322435 -52994330 + MIR SINE MIR 28 156 -106 612 205 0 0 chr10 87322438 87322555 -52994210 - L1MD2 LINE L1 -367 5992 5876 * 2223 210 17 28 chr10 87322553 87323086 -52993679 - L1MA10 LINE L1 -9 6325 5799 1081 165 0 0 chr10 87323214 87323390 -52993375 - L1MA10 LINE L1 -520 5771 5596 21 0 0 0 chr10 87323428 87323449 -52993316 + AT_rich Low_complexity Low_complexity 1 21 0 248 301 173 47 chr10 87323509 87323938 -52992827 - LTR33A LTR ERVL -37 486 4 1905 264 56 119 chr10 87323969 87325266 -52991499 - L2 LINE L2 0 3313 626 417 320 113 10 chr10 87325338 87325541 -52991224 + MIR SINE MIR 5 228 -34 815 208 69 6 chr10 87325616 87325789 -52990976 - MER5A DNA MER1_type -5 184 1 324 203 25 25 chr10 87325789 87325868 -52990897 + MER5A DNA MER1_type 110 188 -1 689 241 99 59 chr10 87326212 87326656 -52990109 + LTR37B LTR ERV1 7 468 0 24 53 0 0 chr10 87327462 87327500 -52989265 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 87328125 87328147 -52988618 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 87328163 87328186 -52988579 + AT_rich Low_complexity Low_complexity 1 23 0 1449 199 100 82 chr10 87330074 87330229 -52986536 + L1MD1 LINE L1 18 169 -6371 2239 108 0 0 chr10 87330229 87330524 -52986241 + AluSx SINE Alu 12 306 -6 1449 199 100 82 chr10 87330524 87330830 -52985935 + L1MD1 LINE L1 169 487 -6053 4997 231 45 41 chr10 87330848 87331137 -52985628 + L1MD1 LINE L1 3770 4057 -2579 351 0 0 0 chr10 87331137 87331176 -52985589 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 4997 231 45 41 chr10 87331176 87332937 -52983828 + L1MD1 LINE L1 4057 5818 -818 2048 125 18 0 chr10 87332937 87333217 -52983548 + AluSq SINE Alu 1 285 -28 4997 231 45 41 chr10 87333217 87334034 -52982731 + L1MD1 LINE L1 5818 6631 -5 4926 36 2 0 chr10 87334595 87335183 -52981582 - L1PA4 LINE L1 -3 6152 5564 3522 8 0 0 chr10 87335847 87336244 -52980521 + L1HS LINE L1 5759 6155 0 371 243 18 27 chr10 87336299 87336410 -52980355 + L1M4 LINE L1 4080 4189 -1957 287 242 74 11 chr10 87336433 87336528 -52980237 - L1MC4a LINE L1 -1633 6175 6075 1001 196 0 6 chr10 87336618 87336791 -52979974 - AluJb SINE Alu -17 295 124 2729 217 47 12 chr10 87338033 87338841 -52977924 + L1MB3 LINE L1 4074 4958 -1188 2017 134 0 7 chr10 87338841 87339131 -52977634 - AluSx SINE Alu -24 288 1 3491 195 82 16 chr10 87339133 87339933 -52976832 + L1MB3 LINE L1 5318 6170 -13 523 263 8 0 chr10 87340465 87340583 -52976182 - MER45A DNA AcHobo 0 178 60 378 313 102 70 chr10 87340629 87341006 -52975759 - L2 LINE L2 -175 3138 2757 319 309 139 22 chr10 87343031 87343261 -52973504 - MIR SINE MIR 0 262 6 1253 177 5 5 chr10 87344040 87344255 -52972510 + AluJo SINE Alu 78 292 -20 1935 154 66 6 chr10 87344589 87344921 -52971844 + MSTB LTR MaLR 75 426 0 226 179 51 39 chr10 87345184 87345262 -52971503 - HAL1b LINE L1 -336 1012 934 1129 193 41 8 chr10 87345307 87345551 -52971214 + AluSg SINE Alu 55 306 -4 846 185 42 101 chr10 87345551 87345633 -52971132 + L1MC1 LINE L1 6105 6190 -143 2238 90 3 16 chr10 87345633 87345945 -52970820 - AluSc SINE Alu -1 308 1 846 185 42 101 chr10 87345945 87346100 -52970665 + L1MC1 LINE L1 6190 6328 -5 677 280 88 70 chr10 87346102 87346945 -52969820 - HAL1b LINE L1 -395 953 96 8987 246 43 17 chr10 87347337 87352864 -52963901 - L1MA8 LINE L1 -3 7707 2017 1856 234 14 53 chr10 87354130 87354622 -52962143 - L1MA8 LINE L1 -6550 939 467 21 0 0 0 chr10 87354850 87354871 -52961894 + AT_rich Low_complexity Low_complexity 1 21 0 360 219 61 12 chr10 87354876 87354955 -52961810 + MER67A LTR ERV1 1 83 -460 1563 216 43 23 chr10 87354955 87355048 -52961717 + MER67A LTR ERV1 3 93 -450 2493 154 42 2 chr10 87355048 87355495 -52961270 + MER4C LTR ERV1 1 465 0 1563 216 43 23 chr10 87355495 87355904 -52960861 + MER67A LTR ERV1 93 543 0 425 259 29 12 chr10 87355914 87356084 -52960681 + L1 LINE L1 4509 4681 -1465 551 279 77 0 chr10 87356113 87356296 -52960469 - MER67A LTR ERV1 -69 474 278 413 301 65 57 chr10 87356312 87356574 -52960191 + L1 LINE L1 4741 5004 -1142 21 36 0 0 chr10 87356786 87356814 -52959951 + AT_rich Low_complexity Low_complexity 1 28 0 276 358 43 0 chr10 87356917 87357079 -52959686 - MIR SINE MIR -6 256 88 27 73 0 0 chr10 87357267 87357322 -52959443 + AT_rich Low_complexity Low_complexity 1 55 0 2278 122 24 16 chr10 87357435 87357805 -52958960 - THE1C LTR MaLR 0 375 3 8232 148 43 39 chr10 87357807 87359338 -52957427 - THE1C-int LTR MaLR 0 1580 43 37428 77 11 9 chr10 87359339 87364866 -52951899 - L1P2 LINE L1 -588 5566 13 294 243 29 15 chr10 87364879 87365015 -52951750 - L1M4 LINE L1 -771 5375 5238 268 314 48 9 chr10 87365349 87365454 -52951311 + MIR SINE MIR 94 202 -60 1547 247 54 70 chr10 87365961 87366843 -52949922 + L1M4 LINE L1 2226 3093 -3053 3463 233 64 26 chr10 87366861 87367817 -52948948 + L1M2b LINE L1 1 992 -6217 231 374 11 0 chr10 87367836 87367927 -52948838 + L1M2b LINE L1 1175 1266 -5943 1974 164 41 16 chr10 87367959 87368325 -52948440 + THE1C LTR MaLR 1 375 0 2460 97 81 107 chr10 87368325 87368831 -52947934 + THE1C-int LTR MaLR 1 493 -1087 460 136 0 0 chr10 87368834 87368900 -52947865 - AluJ/FLAM SINE Alu -233 79 14 1196 175 23 9 chr10 87368900 87369117 -52947648 + AluSg/x SINE Alu 84 303 -9 1835 170 3 23 chr10 87369117 87369459 -52947306 + THE1C-int LTR MaLR 500 834 -746 853 165 55 46 chr10 87369464 87369682 -52947083 - THE1C LTR MaLR -152 223 4 9011 135 43 43 chr10 87369685 87371265 -52945500 - THE1C-int LTR MaLR 0 1580 1 1349 194 114 15 chr10 87371265 87371606 -52945159 - THE1C LTR MaLR 0 375 1 3785 182 7 14 chr10 87371609 87371790 -52944975 + THE1C-int LTR MaLR 933 1114 -537 2095 162 34 17 chr10 87371790 87372148 -52944617 - THE1B LTR MaLR 0 364 1 3785 182 7 14 chr10 87372148 87372690 -52944075 + THE1C-int LTR MaLR 1114 1651 0 1830 215 38 33 chr10 87372690 87372883 -52943882 + MSTB LTR MaLR 1 192 -234 2256 122 0 0 chr10 87372883 87373186 -52943579 + AluSx SINE Alu 1 303 -9 1830 215 38 33 chr10 87373186 87373416 -52943349 + MSTB LTR MaLR 192 426 0 2547 179 38 2 chr10 87373416 87374040 -52942725 + L1 LINE L1 2315 2958 -3890 9460 204 25 14 chr10 87374054 87376520 -52940245 + L1 LINE L1 3611 6105 -743 3338 215 22 45 chr10 87376535 87378135 -52938630 - MER83B-int LTR ERV1 -2658 3605 866 851 283 64 47 chr10 87378170 87378577 -52938188 - MER83B-int LTR ERV1 -4055 2276 1863 486 185 33 53 chr10 87378565 87378716 -52938049 - MER83B-int LTR ERV1 -2595 2285 2138 * 977 179 0 22 chr10 87379062 87379095 -52937670 - LTR47A LTR ERVL -1 451 419 2035 141 35 19 chr10 87379095 87379464 -52937301 + THE1C LTR MaLR 1 375 0 977 179 0 22 chr10 87379464 87379609 -52937156 - LTR47A LTR ERVL -33 419 277 2057 275 66 17 chr10 87379609 87380621 -52936144 + L1M4 LINE L1 3625 4686 -1460 1887 173 5 32 chr10 87380727 87381229 -52935536 + L1MB3 LINE L1 3628 5674 -647 520 226 0 0 chr10 87381899 87382005 -52934760 + U6 snRNA snRNA 1 106 -1 825 149 19 12 chr10 87382005 87382166 -52934599 + L1MB3 LINE L1 5997 6158 -25 303 224 37 84 chr10 87382167 87382274 -52934491 + MER65A LTR ERV1 2 103 -342 4545 214 58 12 chr10 87382828 87384271 -52932494 - L1MD1 LINE L1 0 6242 4637 1908 168 0 0 chr10 87384271 87384574 -52932191 - AluJo SINE Alu -9 303 1 4545 214 58 12 chr10 87384574 87385688 -52931077 - L1MD1 LINE L1 -1605 4637 3576 196 321 37 25 chr10 87386613 87386694 -52930071 - L2 LINE L2 -246 3026 2945 21 0 0 0 chr10 87387374 87387395 -52929370 + AT_rich Low_complexity Low_complexity 1 21 0 1215 269 94 12 chr10 87387955 87388382 -52928383 + L1MDb LINE L1 96 557 -5852 2448 193 20 12 chr10 87388423 87388984 -52927781 + L1MDb LINE L1 653 1217 -5192 1424 265 18 48 chr10 87390310 87390820 -52925945 + L1PA15-16 LINE L1 13 504 -6345 2132 107 101 18 chr10 87390820 87391156 -52925609 - THE1B LTR MaLR 0 364 1 1424 265 18 48 chr10 87391156 87391246 -52925519 + L1PA15-16 LINE L1 504 595 -6254 628 331 32 53 chr10 87391405 87392002 -52924763 + L1M2 LINE L1 687 1558 -5290 3579 238 40 27 chr10 87392014 87393127 -52923638 + L1M2 LINE L1 1481 2578 -4270 1556 204 4 14 chr10 87393127 87393431 -52923334 + AluSx SINE Alu 5 305 0 3579 238 40 27 chr10 87393431 87393736 -52923029 + L1M2 LINE L1 2578 2878 -3970 2141 99 0 7 chr10 87393736 87394053 -52922712 + AluY SINE Alu 1 315 0 3579 238 40 27 chr10 87394053 87394230 -52922535 + L1M2 LINE L1 2878 3051 -3797 1834 128 8 4 chr10 87394230 87394496 -52922269 + AluSq SINE Alu 31 297 -16 2420 51 3 3 chr10 87394498 87394792 -52921973 + AluY SINE Alu 1 294 -17 3579 238 40 27 chr10 87394792 87395593 -52921172 + L1M2 LINE L1 3051 3916 -2932 1842 168 26 12 chr10 87395595 87395935 -52920830 + L1PB4 LINE L1 5812 6156 0 337 303 50 43 chr10 87395979 87396260 -52920505 - ERVL LTR ERVL -2734 3030 2748 1111 313 64 11 chr10 87396304 87396742 -52920023 + LTR33 LTR ERVL 53 513 -8 457 329 61 27 chr10 87397275 87397570 -52919195 - ERVL LTR ERVL -3699 2065 1761 268 240 50 25 chr10 87397927 87397953 -52918812 - L1MA4A LINE L1 0 6303 6278 2955 165 82 3 chr10 87397953 87398571 -52918194 - L1PB4 LINE L1 -14 6844 6178 40514 37 22 2 chr10 87398602 87404636 -52912129 - L1PA3 LINE L1 0 6155 1 5989 211 23 13 chr10 87404638 87404821 -52911944 - L1PB4 LINE L1 -671 6187 6007 2233 129 0 0 chr10 87404821 87405124 -52911641 - AluSg SINE Alu -7 303 1 5989 211 23 13 chr10 87405124 87406923 -52909842 - L1PB4 LINE L1 -851 6007 4190 2943 283 32 26 chr10 87406945 87408337 -52908428 - L1PB4 LINE L1 -4358 2490 998 1345 240 23 171 chr10 87408499 87409777 -52906988 - L1PB4 LINE L1 -5752 1097 13 8115 178 23 11 chr10 87409793 87412460 -52904305 - L1MA4 LINE L1 -7 6293 3596 776 195 7 0 chr10 87412466 87412620 -52904145 - L1PB4 LINE L1 0 6338 6184 * 6931 168 16 1 chr10 87412606 87414639 -52902126 + L1PA13 LINE L1 4090 6144 -19 3009 191 98 29 chr10 87414652 87414877 -52901888 - L1PB4 LINE L1 -129 6209 6001 369 0 0 0 chr10 87414877 87414918 -52901847 + (TG)n Simple_repeat Simple_repeat 2 42 0 3009 191 98 29 chr10 87414918 87415246 -52901519 - L1PB4 LINE L1 -337 6001 5697 5239 198 39 2 chr10 87415246 87417187 -52899578 - L1PA15 LINE L1 -2 7582 5580 3009 191 98 29 chr10 87417187 87418037 -52898728 - L1PB4 LINE L1 -641 5697 2678 1866 224 17 15 chr10 87418031 87418579 -52898186 - L1PA15 LINE L1 -4476 3089 2553 * 1917 165 47 30 chr10 87418589 87419118 -52897647 - MLT2A2 LTR ERVL -8 546 2 6367 158 57 9 chr10 87419129 87420363 -52896402 - L1PB4 LINE L1 -4065 1263 1 2044 161 54 61 chr10 87420499 87420548 -52896217 - MSTB LTR MaLR 0 426 378 2472 75 3 3 chr10 87420548 87420855 -52895910 + AluSx SINE Alu 1 307 -5 2044 161 54 61 chr10 87420855 87421234 -52895531 - MSTB LTR MaLR -48 378 1 622 328 82 19 chr10 87421423 87422244 -52894521 + ERVL LTR ERVL 3338 4247 -1517 321 26 0 0 chr10 87422567 87422605 -52894160 + (TG)n Simple_repeat Simple_repeat 1 38 0 434 330 61 37 chr10 87422746 87423204 -52893561 + ERVL LTR ERVL 4912 5380 -384 248 317 0 0 chr10 87423958 87424040 -52892725 + LTR67 LTR ERVL 435 516 -41 258 242 187 22 chr10 87424093 87424184 -52892581 + L2 LINE L2 2804 2909 -363 504 0 0 0 chr10 87424195 87424251 -52892514 + (CA)n Simple_repeat Simple_repeat 1 56 0 621 197 104 67 chr10 87424549 87424742 -52892023 + MER45R DNA AcHobo 1 200 -1381 3882 188 87 12 chr10 87424874 87425915 -52890850 + MER45R DNA AcHobo 436 1553 -28 2054 111 4 7 chr10 87426050 87426329 -52890436 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr10 87426330 87426364 -52890401 + (CA)n Simple_repeat Simple_repeat 1 34 0 457 323 141 22 chr10 87426535 87426811 -52889954 + L2 LINE L2 3005 3313 0 312 287 10 20 chr10 87428162 87428263 -52888502 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 87428385 87428412 -52888353 + AT_rich Low_complexity Low_complexity 1 27 0 196 311 52 118 chr10 87429100 87429406 -52887359 + L2 LINE L2 2986 3271 -1 337 322 34 7 chr10 87430057 87430203 -52886562 + L1ME LINE L1 5636 5785 -336 417 341 0 6 chr10 87430591 87430758 -52886007 + L2 LINE L2 1802 1967 -1347 1274 201 8 8 chr10 87430758 87430997 -52885768 - MER8 DNA MER2_type 0 239 1 407 241 0 0 chr10 87431035 87431122 -52885643 + MER58 DNA MER1_type 168 254 -87 1260 299 102 30 chr10 87431126 87431494 -52885271 + L2 LINE L2 1991 2331 -983 315 0 0 0 chr10 87431494 87431529 -52885236 + (CA)n Simple_repeat Simple_repeat 1 35 0 1260 299 102 30 chr10 87431529 87431826 -52884939 + L2 LINE L2 2331 2704 -610 345 341 198 9 chr10 87431854 87432071 -52884694 + L2 LINE L2 2804 3061 -211 571 340 171 23 chr10 87432662 87433351 -52883414 + L2 LINE L2 1216 2006 -1308 486 139 0 0 chr10 87436436 87436522 -52880243 + (TC)n Simple_repeat Simple_repeat 1 86 0 326 266 61 11 chr10 87436960 87437087 -52879678 - MIR SINE MIR -68 140 11 2637 100 3 16 chr10 87438287 87438656 -52878109 + THE1B LTR MaLR 1 364 0 799 292 52 35 chr10 87439185 87439226 -52877539 - MLT1I LTR MaLR 0 409 370 390 91 0 0 chr10 87439226 87439281 -52877484 + (CA)n Simple_repeat Simple_repeat 2 56 0 799 292 52 35 chr10 87439281 87439606 -52877159 - MLT1I LTR MaLR -39 370 37 2153 103 0 10 chr10 87439637 87439928 -52876837 + AluSg SINE Alu 1 288 -22 258 272 117 10 chr10 87440064 87440167 -52876598 - MIR SINE MIR -78 130 17 228 35 0 0 chr10 87440248 87440277 -52876488 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 629 260 148 9 chr10 87443154 87443377 -52873388 - MIR SINE MIR -7 255 2 402 226 43 67 chr10 87444298 87444462 -52872303 + L2 LINE L2 2995 3154 -159 527 190 25 41 chr10 87444515 87444636 -52872129 + MLT1D LTR MaLR 1 119 -386 718 230 69 18 chr10 87444646 87444812 -52871953 + MLT1D LTR MaLR 275 456 -49 1679 224 77 59 chr10 87444812 87445356 -52871409 + MLT2B3 LTR ERVL 1 554 0 718 230 69 18 chr10 87445356 87445406 -52871359 + MLT1D LTR MaLR 456 502 -3 335 263 25 0 chr10 87445412 87445492 -52871273 + L2 LINE L2 3232 3313 0 204 280 65 21 chr10 87445618 87445711 -52871054 + L2 LINE L2 1394 1490 -1824 * 226 320 80 56 chr10 87445664 87445789 -52870976 - L2 LINE L2 -7 3265 3138 185 250 0 0 chr10 87445829 87445869 -52870896 - L2 LINE L2 -16 3256 3217 209 204 0 74 chr10 87445941 87445995 -52870770 + MIR SINE MIR 92 141 -67 1301 209 20 20 chr10 87446053 87446354 -52870411 + MLT2D LTR ERVL 1 301 -113 197 262 97 10 chr10 87446405 87446508 -52870257 + L2 LINE L2 3075 3186 -127 352 220 209 0 chr10 87446572 87446663 -52870102 + MLT2D LTR ERVL 305 414 0 360 337 9 3 chr10 87446736 87446871 -52869894 - MIR SINE MIR -62 146 22 4507 275 78 20 chr10 87447449 87449664 -52867101 + L1MC/D LINE L1 37 2392 -3823 2373 104 0 0 chr10 87449664 87449972 -52866793 + AluSg SINE Alu 1 308 -2 4507 275 78 20 chr10 87449972 87450362 -52866403 + L1MC/D LINE L1 2392 2758 -3457 403 232 26 53 chr10 87450377 87450528 -52866237 - L1M4 LINE L1 -3355 2791 2645 2938 246 36 1 chr10 87450643 87451535 -52865230 + L1MC/D LINE L1 4271 5193 -1022 239 89 156 0 chr10 87451539 87451584 -52865181 + MER68 LTR ERV1 1 52 -510 2480 209 19 8 chr10 87451593 87452111 -52864654 + MER68 LTR ERV1 29 552 -10 540 207 95 93 chr10 87452111 87452649 -52864116 + L1MC/D LINE L1 5198 5755 -745 270 155 35 0 chr10 87452648 87452706 -52864059 + L1MA10 LINE L1 6268 6327 -7 * 2002 115 0 7 chr10 87452728 87452998 -52863767 + AluSx SINE Alu 8 275 -37 225 0 0 0 chr10 87453002 87453027 -52863738 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 491 327 73 14 chr10 87453716 87454071 -52862694 + L1ME LINE L1 520 895 -5175 673 140 26 0 chr10 87454071 87454185 -52862580 - Tigger1 DNA MER2_type -218 2200 2084 1244 142 0 0 chr10 87454185 87454361 -52862404 - AluSg/x SINE Alu -3 309 134 2200 81 7 7 chr10 87454361 87454700 -52862065 - AluY SINE Alu 0 311 1 1655 152 3 3 chr10 87454700 87454983 -52861782 - L1M2 LINE L1 -527 5785 5503 371 186 0 0 chr10 87454976 87455046 -52861719 + L1M3 LINE L1 5407 5476 -692 * 307 307 197 0 chr10 87455155 87455292 -52861473 - MIR SINE MIR -36 226 63 351 304 18 0 chr10 87457272 87457384 -52859381 - MIR SINE MIR -109 153 40 241 273 40 10 chr10 87457448 87457547 -52859218 + CT-rich Low_complexity Low_complexity 3 104 0 514 245 14 27 chr10 87458538 87458685 -52858080 - MLT1G1 LTR MaLR 0 595 451 38 22 0 0 chr10 87459026 87459071 -52857694 + AT_rich Low_complexity Low_complexity 1 45 0 255 320 0 10 chr10 87459133 87459230 -52857535 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 227 149 0 21 chr10 87459317 87459364 -52857401 + (TG)n Simple_repeat Simple_repeat 1 46 0 26 0 0 0 chr10 87460459 87460485 -52856280 + AT_rich Low_complexity Low_complexity 1 26 0 1987 130 6 29 chr10 87461141 87461456 -52855309 + AluSp SINE Alu 1 308 -5 1692 234 14 53 chr10 87462461 87462953 -52853812 - L1M3e LINE L1 -6550 480 8 21 0 0 0 chr10 87463181 87463202 -52853563 + AT_rich Low_complexity Low_complexity 1 21 0 363 222 62 0 chr10 87463207 87463285 -52853480 + MER67A LTR ERV1 1 83 -460 1563 216 43 23 chr10 87463285 87463378 -52853387 + MER67A LTR ERV1 3 93 -450 2493 154 42 2 chr10 87463378 87463825 -52852940 + MER4C LTR ERV1 1 465 0 1563 216 43 23 chr10 87463825 87464234 -52852531 + MER67A LTR ERV1 93 543 0 425 259 29 12 chr10 87464244 87464414 -52852351 + L1M4 LINE L1 4509 4681 -1465 551 279 77 0 chr10 87464443 87464626 -52852139 - MER67A LTR ERV1 -69 474 278 410 303 73 61 chr10 87464641 87464903 -52851862 + L1M4 LINE L1 4740 5004 -1142 21 36 0 0 chr10 87465114 87465142 -52851623 + AT_rich Low_complexity Low_complexity 1 28 0 276 358 43 0 chr10 87465245 87465407 -52851358 - MIR SINE MIR -6 256 88 27 73 0 0 chr10 87465595 87465650 -52851115 + AT_rich Low_complexity Low_complexity 1 55 0 2278 122 24 16 chr10 87465763 87466133 -52850632 - THE1C LTR MaLR 0 375 3 8232 148 43 39 chr10 87466135 87467666 -52849099 - THE1C-int LTR MaLR 0 1580 43 38276 57 26 10 chr10 87467667 87473121 -52843644 - L1P2 LINE L1 -588 5566 1 7125 207 20 18 chr10 87473123 87473306 -52843459 - L1P5 LINE L1 -671 5542 5361 2224 129 0 0 chr10 87473306 87473608 -52843157 - AluSg SINE Alu -8 302 1 7125 207 20 18 chr10 87473608 87475407 -52841358 - L1P5 LINE L1 -852 5361 3545 2855 285 33 27 chr10 87475429 87476820 -52839945 - L1P5 LINE L1 -4358 1845 353 1339 239 24 171 chr10 87476982 87478259 -52838506 - L1M2b LINE L1 -5752 1097 13 8085 178 23 12 chr10 87478275 87480943 -52835822 - L1MA4 LINE L1 -7 7712 5015 776 195 7 0 chr10 87480949 87481103 -52835662 - L1PB4 LINE L1 0 6156 6002 * 6944 168 16 1 chr10 87481089 87483122 -52833643 + L1PA13 LINE L1 4090 6144 -19 2030 150 63 10 chr10 87483135 87483360 -52833405 - L1PB4 LINE L1 -129 6027 5815 387 0 0 0 chr10 87483360 87483403 -52833362 + (TG)n Simple_repeat Simple_repeat 2 44 0 2030 150 63 10 chr10 87483403 87483590 -52833175 - L1PB4 LINE L1 -341 5815 5593 577 240 45 0 chr10 87483565 87483719 -52833046 - L1MA4 LINE L1 -2557 5008 4848 * 5029 174 36 8 chr10 87483731 87485680 -52831085 - L1PA15 LINE L1 -2 6163 4161 2680 213 132 2 chr10 87485674 87486530 -52830235 - L1MA4 LINE L1 -2684 4881 3915 * 1918 229 15 9 chr10 87486524 87487070 -52829695 - L1MA4 LINE L1 -4476 3089 2553 * 1966 163 48 29 chr10 87487080 87487608 -52829157 - MLT2A2 LTR ERVL -8 546 2 6367 158 57 9 chr10 87487619 87488853 -52827912 - L1M3f LINE L1 -4065 1263 1 2044 161 54 61 chr10 87488989 87489038 -52827727 - MSTB LTR MaLR 0 426 378 2364 93 0 7 chr10 87489038 87489348 -52827417 + AluY SINE Alu 1 308 -3 2044 161 54 61 chr10 87489348 87489727 -52827038 - MSTB LTR MaLR -48 378 1 632 326 82 19 chr10 87489916 87490737 -52826028 + ERVL LTR ERVL 3338 4247 -1517 303 28 0 0 chr10 87491060 87491096 -52825669 + (TG)n Simple_repeat Simple_repeat 1 36 0 434 330 61 37 chr10 87491237 87491695 -52825070 + ERVL LTR ERVL 4912 5380 -384 248 317 0 0 chr10 87492449 87492531 -52824234 + LTR67 LTR ERVL 435 516 -41 267 231 187 22 chr10 87492584 87492675 -52824090 + L2 LINE L2 2804 2909 -363 378 0 0 0 chr10 87492686 87492728 -52824037 + (CA)n Simple_repeat Simple_repeat 1 42 0 621 197 104 67 chr10 87493025 87493218 -52823547 + MER45R DNA AcHobo 1 200 -1381 3882 188 87 12 chr10 87493350 87494391 -52822374 + MER45R DNA AcHobo 436 1553 -28 2054 111 4 7 chr10 87494526 87494805 -52821960 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr10 87494806 87494840 -52821925 + (CA)n Simple_repeat Simple_repeat 1 34 0 457 323 141 22 chr10 87495011 87495287 -52821478 + L2 LINE L2 3005 3313 0 312 287 10 20 chr10 87496639 87496740 -52820025 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 87496862 87496889 -52819876 + AT_rich Low_complexity Low_complexity 1 27 0 337 322 34 7 chr10 87498547 87498693 -52818072 + L1ME LINE L1 5636 5785 -336 432 335 0 6 chr10 87499081 87499248 -52817517 + L2 LINE L2 1802 1967 -1347 1244 200 8 12 chr10 87499248 87499488 -52817277 - MER8 DNA MER2_type 0 239 1 407 241 0 0 chr10 87499526 87499613 -52817152 + MER58 DNA MER1_type 168 254 -87 1274 305 98 25 chr10 87499617 87499985 -52816780 + L2 LINE L2 1991 2331 -983 315 0 0 0 chr10 87499985 87500020 -52816745 + (CA)n Simple_repeat Simple_repeat 1 35 0 1274 305 98 25 chr10 87500020 87500317 -52816448 + L2 LINE L2 2331 2704 -610 345 341 198 9 chr10 87500345 87500562 -52816203 + L2 LINE L2 2804 3061 -211 565 330 177 29 chr10 87501153 87501842 -52814923 + L2 LINE L2 1216 2006 -1308 468 143 0 0 chr10 87504928 87505012 -52811753 + (TC)n Simple_repeat Simple_repeat 1 84 0 326 266 61 11 chr10 87505451 87505578 -52811187 - MIR SINE MIR -68 140 11 2623 103 3 16 chr10 87506778 87507147 -52809618 + THE1B LTR MaLR 1 364 0 918 292 52 35 chr10 87507676 87507717 -52809048 - MLT1I LTR MaLR 0 409 370 390 91 0 0 chr10 87507717 87507772 -52808993 + (CA)n Simple_repeat Simple_repeat 2 56 0 918 292 52 35 chr10 87507772 87508097 -52808668 - MLT1I LTR MaLR -39 370 37 2124 110 0 10 chr10 87508128 87508419 -52808346 + AluSg SINE Alu 1 288 -22 256 272 117 10 chr10 87508555 87508658 -52808107 - MIR SINE MIR -78 130 17 228 35 0 0 chr10 87508739 87508768 -52807997 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 618 260 148 9 chr10 87511647 87511870 -52804895 - MIR SINE MIR -7 255 2 391 226 43 67 chr10 87512790 87512954 -52803811 + L2 LINE L2 2995 3154 -159 580 190 25 41 chr10 87513007 87513128 -52803637 + MLT1D LTR MaLR 1 119 -386 806 226 69 18 chr10 87513138 87513304 -52803461 + MLT1D LTR MaLR 275 456 -49 1947 227 65 60 chr10 87513304 87513855 -52802910 + MLT2B3 LTR ERVL 1 554 0 806 226 69 18 chr10 87513855 87513905 -52802860 + MLT1D LTR MaLR 456 502 -3 328 263 25 0 chr10 87513911 87513991 -52802774 + L2 LINE L2 3232 3313 0 336 308 55 6 chr10 87515576 87515758 -52801007 + L1MC4a LINE L1 5701 5891 -1917 445 303 0 0 chr10 87516048 87516147 -52800618 + L2 LINE L2 3171 3269 -3 21 0 0 0 chr10 87516809 87516830 -52799935 + AT_rich Low_complexity Low_complexity 1 21 0 2234 68 4 4 chr10 87517131 87517461 -52799304 + AluY SINE Alu 1 330 0 338 378 50 37 chr10 87519382 87519623 -52797142 + L2 LINE L2 3028 3271 -1 249 312 118 0 chr10 87519897 87519990 -52796775 + MIR SINE MIR 57 160 -102 2763 16 0 13 chr10 87520239 87520552 -52796213 - AluYa5 SINE Alu -2 309 1 2013 227 49 13 chr10 87522449 87522999 -52793766 + L1MB2 LINE L1 2628 3197 -2949 459 0 0 0 chr10 87523039 87523090 -52793675 + (TA)n Simple_repeat Simple_repeat 1 51 0 2958 72 6 0 chr10 87523090 87523453 -52793312 - L1PA7 LINE L1 -19 6135 5771 297 270 0 0 chr10 87523455 87523555 -52793210 + T-rich Low_complexity Low_complexity 1 100 0 10052 95 1 1 chr10 87523558 87525654 -52791111 - L1PA7 LINE L1 -3 6151 4055 5115 218 47 6 chr10 87525654 87525970 -52790795 + L1MB2 LINE L1 3923 4224 -1922 234 62 0 0 chr10 87525970 87526002 -52790763 + (CA)n Simple_repeat Simple_repeat 1 32 0 5115 218 47 6 chr10 87526002 87526937 -52789828 + L1MB2 LINE L1 4224 5226 -920 2725 145 99 44 chr10 87526941 87527528 -52789237 + L1MB2 LINE L1 5295 5913 -255 444 151 23 0 chr10 87527532 87527618 -52789147 + L1MB2 LINE L1 6076 6163 -8 1441 212 0 41 chr10 87528552 87528868 -52787897 - AluJo SINE Alu -5 307 5 392 277 139 44 chr10 87529322 87529661 -52787104 - L1ME4a LINE L1 -280 5841 5471 5419 153 16 5 chr10 87532065 87533050 -52783715 + L1PA16 LINE L1 5171 6166 0 2911 256 60 16 chr10 87533049 87534533 -52782232 - L1ME1 LINE L1 -47 6119 4569 * 1471 189 28 21 chr10 87535445 87535736 -52781029 + AluJb SINE Alu 1 293 -19 239 0 32 0 chr10 87537534 87537565 -52779200 + (CA)n Simple_repeat Simple_repeat 2 33 0 2316 140 61 10 chr10 87537939 87538146 -52778619 - MER41C LTR ERV1 0 554 359 339 25 0 0 chr10 87538146 87538186 -52778579 + (TG)n Simple_repeat Simple_repeat 1 40 0 2316 140 61 10 chr10 87538186 87538385 -52778380 - MER41C LTR ERV1 -195 359 127 1929 123 0 24 chr10 87538938 87539231 -52777534 + AluSx SINE Alu 1 286 -26 3579 85 2 0 chr10 87539267 87539727 -52777038 - MER41A LTR ERV1 0 554 94 1587 161 0 0 chr10 87539860 87540115 -52776650 + AluSx SINE Alu 45 299 -13 405 0 0 0 chr10 87540761 87540806 -52775959 + (CA)n Simple_repeat Simple_repeat 2 46 0 2116 115 0 3 chr10 87540807 87541093 -52775672 - AluSg SINE Alu -25 285 1 22 0 0 0 chr10 87541096 87541118 -52775647 + AT_rich Low_complexity Low_complexity 1 22 0 2436 86 83 0 chr10 87541175 87541524 -52775241 - L1PA13 LINE L1 0 6163 5786 365 358 48 5 chr10 87542082 87542269 -52774496 + L3 LINE CR1 1276 1470 -107 1949 121 38 7 chr10 87542307 87542596 -52774169 - AluSx SINE Alu -14 298 1 1182 157 124 12 chr10 87543228 87543477 -52773288 + L1MB2 LINE L1 5893 6169 -2 363 296 0 0 chr10 87543522 87543637 -52773128 + HAL1b LINE L1 935 1049 -299 1103 197 83 28 chr10 87545955 87546244 -52770521 + MLT1F1 LTR MaLR 259 563 -4 260 269 66 15 chr10 87547839 87547952 -52768813 + MIR SINE MIR 41 154 -64 329 261 43 30 chr10 87550028 87550129 -52766636 - MIR SINE MIR -78 130 44 355 301 218 38 chr10 87551025 87551291 -52765474 + L2 LINE L2 2911 3224 -89 2856 281 76 13 chr10 87551395 87552030 -52764735 - L1ME LINE L1 -1606 4474 3881 1909 133 0 18 chr10 87552030 87552316 -52764449 - AluSx SINE Alu -11 301 21 2856 281 76 13 chr10 87552316 87552932 -52763833 - L1ME LINE L1 -2199 3881 3144 23 0 0 0 chr10 87553019 87553042 -52763723 + AT_rich Low_complexity Low_complexity 1 23 0 1741 208 24 62 chr10 87553099 87553522 -52763243 - MLT2D LTR ERVL -7 407 1 2123 274 54 39 chr10 87553530 87555446 -52761319 - L1ME LINE L1 -3456 2624 608 704 247 18 75 chr10 87555446 87555673 -52761092 - MER58C DNA MER1_type -1 214 1 2123 274 54 39 chr10 87555673 87556256 -52760509 - L1ME LINE L1 -5472 608 35 586 155 0 0 chr10 87556755 87556839 -52759926 + AluJb SINE Alu 168 251 -61 252 295 72 96 chr10 87557377 87557709 -52759056 + L2 LINE L2 2328 2651 -663 214 152 43 0 chr10 87559630 87559676 -52757089 + T-rich Low_complexity Low_complexity 1 48 0 2944 97 25 2 chr10 87559676 87560079 -52756686 - L1MA2 LINE L1 0 6304 5893 307 301 149 41 chr10 87560287 87560492 -52756273 - MIR SINE MIR -14 248 11 203 290 160 40 chr10 87561782 87561882 -52754883 + MIR SINE MIR 30 141 -67 438 20 0 0 chr10 87562109 87562160 -52754605 + (CAT)n Simple_repeat Simple_repeat 2 52 0 434 287 75 16 chr10 87562160 87562348 -52754417 - MIR SINE MIR -14 248 50 234 312 191 35 chr10 87564406 87564637 -52752128 + L2 LINE L2 2996 3262 -10 258 203 29 14 chr10 87565543 87565612 -52751153 + MLT1F1 LTR MaLR 7 76 -466 318 246 36 73 chr10 87565625 87565735 -52751030 + MLT1F1 LTR MaLR 177 282 -285 1936 130 0 94 chr10 87565864 87566194 -52750571 + AluSx SINE Alu 2 300 -2 1416 269 137 8 chr10 87566495 87567008 -52749757 - L2 LINE L2 -540 2774 2196 201 39 0 0 chr10 87567402 87567428 -52749337 + (TA)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 87567491 87567521 -52749244 + AT_rich Low_complexity Low_complexity 1 30 0 2056 115 4 4 chr10 87568226 87568504 -52748261 + AluSq SINE Alu 1 278 -35 1015 118 18 0 chr10 87568504 87568674 -52748091 + GA-rich Low_complexity Low_complexity 2 174 0 893 219 50 12 chr10 87568774 87568868 -52747897 - L1MD2 LINE L1 -105 6648 6559 198 0 0 0 chr10 87568868 87568890 -52747875 + (TG)n Simple_repeat Simple_repeat 1 22 0 893 219 50 12 chr10 87568890 87569571 -52747194 - L1MD2 LINE L1 -194 6559 5744 * 1321 228 114 14 chr10 87569554 87569993 -52746772 - L1MD2 LINE L1 -4071 2469 1987 1172 217 44 4 chr10 87570006 87570255 -52746510 - L1MD2 LINE L1 -6127 416 158 427 261 110 32 chr10 87570362 87570580 -52746185 + MER102a DNA MER1_type 70 304 -26 441 272 86 19 chr10 87570697 87570859 -52745906 - MIR SINE MIR -73 189 17 2293 81 19 10 chr10 87571056 87571363 -52745402 - AluY SINE Alu -1 310 1 734 186 0 16 chr10 87571508 87571637 -52745128 + FRAM SINE Alu 20 146 -30 792 241 123 29 chr10 87572252 87572643 -52744122 + MLT1G LTR MaLR 10 495 -72 2435 169 2 1 chr10 87572656 87573177 -52743588 - LTR69 LTR ERVL -5 583 1 354 194 15 0 chr10 87573184 87573251 -52743514 + MLT1G LTR MaLR 488 555 0 354 360 0 9 chr10 87573596 87573710 -52743055 + L2 LINE L2 3180 3292 -21 1534 194 56 29 chr10 87574030 87574236 -52742529 - MLT1B LTR MaLR 0 390 170 396 40 0 0 chr10 87574236 87574286 -52742479 + (GA)n Simple_repeat Simple_repeat 1 50 0 1534 194 56 29 chr10 87574286 87574419 -52742346 - MLT1B LTR MaLR -220 170 42 2182 116 3 25 chr10 87574447 87574766 -52741999 - AluSq SINE Alu -1 312 1 621 254 74 45 chr10 87575688 87575932 -52740833 + MIR SINE MIR 12 262 0 315 71 0 0 chr10 87576089 87576131 -52740634 + (TG)n Simple_repeat Simple_repeat 1 42 0 904 254 56 85 chr10 87576755 87577168 -52739597 - MLT1J2 LTR MaLR -48 402 2 231 322 34 62 chr10 87577922 87578099 -52738666 - L2 LINE L2 -183 3089 2918 232 320 72 33 chr10 87579698 87579801 -52736964 - HAL1 LINE L1 -769 1738 1626 207 0 0 0 chr10 87579801 87579824 -52736941 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 232 320 72 33 chr10 87579824 87579873 -52736892 - HAL1 LINE L1 -881 1626 1580 2252 104 0 3 chr10 87580871 87581168 -52735597 + AluSx SINE Alu 1 296 -16 1580 180 67 42 chr10 87581236 87581592 -52735173 + MLT1A1 LTR MaLR 1 365 0 431 255 19 0 chr10 87581780 87581886 -52734879 - MER103 DNA DNA -55 111 4 1188 357 0 79 chr10 87581969 87582297 -52734468 + AluJo SINE Alu 1 302 0 4538 129 72 36 chr10 87583484 87584527 -52732238 + L1MA8 LINE L1 5046 6104 -187 768 205 8 0 chr10 87584528 87584655 -52732110 - FLAM_C SINE Alu -14 129 2 803 169 81 0 chr10 87584656 87584816 -52731949 + L1MA8 LINE L1 6097 6269 -22 462 307 185 20 chr10 87584836 87585145 -52731620 - LTR16A LTR ERVL -91 366 10 251 310 11 23 chr10 87585348 87585435 -52731330 + MIR SINE MIR 59 144 -118 199 294 76 59 chr10 87585837 87585956 -52730809 + MIR3 SINE MIR 57 177 -31 1431 186 79 19 chr10 87586003 87586321 -52730444 - MER44D DNA MER2_type 0 609 3 604 327 68 65 chr10 87586409 87586952 -52729813 - L2 LINE L2 -2 3270 2731 514 263 172 43 chr10 87587629 87588001 -52728764 + MLT1H LTR MaLR 121 540 -9 319 251 34 151 chr10 87588056 87588554 -52728211 + HAL1 LINE L1 1233 1672 -835 807 274 68 19 chr10 87589575 87589838 -52726927 + Charlie8 DNA MER1_type 3 278 -2139 362 273 56 14 chr10 87589984 87590127 -52726638 - MIR3 SINE MIR -41 167 19 2313 163 84 7 chr10 87590321 87590751 -52726014 + L1MB3 LINE L1 5499 5961 -222 423 0 0 0 chr10 87590751 87590798 -52725967 + (TG)n Simple_repeat Simple_repeat 1 47 0 2260 98 0 52 chr10 87592806 87593131 -52723634 + AluSx SINE Alu 1 308 -4 716 200 0 15 chr10 87593214 87593349 -52723416 + FLAM_A SINE Alu 1 133 0 425 147 0 0 chr10 87593516 87593584 -52723181 + L1MA9 LINE L1 6242 6309 -3 21 71 0 0 chr10 87593680 87593722 -52723043 + AT_rich Low_complexity Low_complexity 1 42 0 4379 198 17 12 chr10 87594025 87595008 -52721757 - L1MB1 LINE L1 0 6168 5174 639 149 9 0 chr10 87595009 87595116 -52721649 + L1MB1 LINE L1 5071 5178 -968 472 296 18 24 chr10 87596294 87596463 -52720302 + MIR SINE MIR 95 262 0 2678 128 35 28 chr10 87596472 87596901 -52719864 + MSTB1 LTR MaLR 1 432 0 472 349 0 0 chr10 87597408 87597554 -52719211 - MIR SINE MIR -109 153 8 480 295 72 32 chr10 87598789 87599040 -52717725 - MIR SINE MIR 0 262 2 258 56 0 0 chr10 87599260 87599296 -52717469 + (CA)n Simple_repeat Simple_repeat 1 36 0 333 238 95 29 chr10 87600206 87600311 -52716454 + MER5A DNA MER1_type 13 124 -65 230 222 19 0 chr10 87600321 87600375 -52716390 - MER5A DNA MER1_type -83 106 52 751 214 8 0 chr10 87602807 87602938 -52713827 + FLAM_A SINE Alu 1 132 -1 508 304 43 6 chr10 87603096 87603302 -52713463 - L1 LINE L1 -2382 3764 3547 21 36 0 0 chr10 87603390 87603418 -52713347 + AT_rich Low_complexity Low_complexity 1 28 0 724 311 40 57 chr10 87603524 87604049 -52712716 - L1MEd LINE L1 -5569 550 35 220 258 0 67 chr10 87604159 87604248 -52712517 - L2 LINE L2 -222 3050 2968 521 216 0 0 chr10 87605597 87605685 -52711080 + AluJ/FLAM SINE Alu 4 91 -221 25 31 0 0 chr10 87605690 87605722 -52711043 + AT_rich Low_complexity Low_complexity 1 32 0 1195 68 32 42 chr10 87605734 87605924 -52710841 + L1MA5A LINE L1 5779 5966 -331 736 349 59 3 chr10 87606459 87606783 -52709982 - L1MEc LINE L1 -6015 381 40 35 54 0 0 chr10 87608645 87608701 -52708064 + AT_rich Low_complexity Low_complexity 1 56 0 1116 112 0 0 chr10 87608886 87609038 -52707727 - AluSp/q SINE Alu -4 309 158 426 292 69 17 chr10 87609038 87609271 -52707494 + L1M4 LINE L1 4247 4491 -1655 38 81 0 0 chr10 87609310 87609397 -52707368 + AT_rich Low_complexity Low_complexity 1 87 0 390 274 147 29 chr10 87609597 87609626 -52707139 - L1MC4a LINE L1 -1892 5916 5892 2218 120 0 0 chr10 87609626 87609640 -52707125 - AluSq SINE Alu 0 313 300 274 57 0 0 chr10 87609640 87609675 -52707090 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 2218 120 0 0 chr10 87609675 87609961 -52706804 - AluSq SINE Alu -12 301 1 390 274 147 29 chr10 87609961 87610135 -52706630 - L1MC4a LINE L1 -1916 5892 5689 429 267 96 111 chr10 87610419 87610811 -52705954 - MLT1I LTR MaLR -4 405 21 244 234 0 0 chr10 87611559 87611623 -52705142 + L1ME LINE L1 5727 5790 -331 272 235 12 35 chr10 87612633 87612718 -52704047 - MIR SINE MIR -132 130 48 235 281 56 11 chr10 87612822 87612911 -52703854 + MER91A DNA MER1_type 16 108 -88 258 299 20 75 chr10 87613107 87613254 -52703511 + MIR SINE MIR 28 166 -96 235 158 0 0 chr10 87613982 87614020 -52702745 + MIR SINE MIR 109 146 -116 537 319 30 9 chr10 87616119 87616351 -52700414 + MIR SINE MIR 15 251 -11 342 0 0 0 chr10 87616717 87616755 -52700010 + (CA)n Simple_repeat Simple_repeat 1 38 0 737 240 40 0 chr10 87616811 87616986 -52699779 + MER5A DNA MER1_type 1 182 -7 1923 157 3 7 chr10 87617361 87617660 -52699105 - AluSx SINE Alu -14 298 1 1868 176 0 3 chr10 87617662 87617969 -52698796 - AluJo SINE Alu -6 306 1 948 216 41 30 chr10 87618516 87618784 -52697981 + MER33 DNA MER1_type 1 271 -53 289 231 44 11 chr10 87618811 87618902 -52697863 - MER5B DNA MER1_type -5 173 80 459 294 183 46 chr10 87619062 87619477 -52697288 - L2 LINE L2 -1 3312 2841 1825 174 57 14 chr10 87619524 87619874 -52696891 + MLT1A1 LTR MaLR 1 365 0 509 74 37 25 chr10 87620073 87620154 -52696611 + L1MC1 LINE L1 6252 6333 0 306 310 190 0 chr10 87620206 87620380 -52696385 + L2 LINE L2 2928 3134 -179 264 59 0 0 chr10 87620401 87620435 -52696330 + (TG)n Simple_repeat Simple_repeat 2 35 0 264 321 0 25 chr10 87620454 87620535 -52696230 + L2 LINE L2 3189 3267 -5 304 237 57 72 chr10 87620891 87621085 -52695680 + L1MC5 LINE L1 7723 7913 -48 297 285 78 51 chr10 87621116 87621372 -52695393 - L2 LINE L2 -1026 2288 2026 232 259 69 26 chr10 87621454 87621570 -52695195 + L3 LINE CR1 1249 1369 -208 548 261 12 101 chr10 87622011 87622138 -52694627 + MIR SINE MIR 29 123 -139 1552 143 10 101 chr10 87622138 87622445 -52694320 + AluJb SINE Alu 1 279 -33 548 261 12 101 chr10 87622445 87622574 -52694191 + MIR SINE MIR 123 262 0 371 43 0 0 chr10 87623589 87623636 -52693129 - THE1B LTR MaLR -25 339 293 2746 102 8 5 chr10 87624260 87624634 -52692131 - THE1C LTR MaLR 0 375 1 325 296 57 11 chr10 87624982 87625158 -52691607 + MIR SINE MIR 28 211 -51 333 374 16 0 chr10 87626152 87626339 -52690426 + MIR SINE MIR 67 256 -6 1308 98 0 0 chr10 87626359 87626523 -52690242 - AluSg/x SINE Alu -13 299 136 304 125 0 0 chr10 87626523 87626563 -52690202 + AluS SINE Alu 18 57 -251 279 271 221 20 chr10 87626901 87627100 -52689665 - L3 LINE CR1 -705 872 634 989 179 6 11 chr10 87627164 87627343 -52689422 + AluSg/x SINE Alu 135 312 0 398 283 98 23 chr10 87627408 87627581 -52689184 + MIR SINE MIR 18 203 -59 3511 73 0 0 chr10 87627606 87628046 -52688719 - MLT2A1 LTR ERVL -4 440 1 45723 68 7 2 chr10 87628047 87633676 -52683089 - HERVL-A1 LTR ERVL -1 5653 1 3220 114 22 27 chr10 87633676 87634186 -52682579 - MLT2A1 LTR ERVL 0 515 5 255 265 78 10 chr10 87634208 87634310 -52682455 - MIR SINE MIR -57 205 97 581 267 11 22 chr10 87635321 87635501 -52681264 + MER5B DNA MER1_type 1 178 0 874 189 126 5 chr10 87635511 87635702 -52681063 + MER20 DNA MER1_type 3 216 -3 211 103 244 0 chr10 87635715 87635769 -52680996 + MER5C DNA MER1_type 4 76 -113 1815 137 41 0 chr10 87635770 87636040 -52680725 + AluSx SINE Alu 1 281 -31 204 67 0 0 chr10 87636041 87636071 -52680694 + (TC)n Simple_repeat Simple_repeat 1 30 0 187 109 0 43 chr10 87636073 87636119 -52680646 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 220 0 0 chr10 87636137 87636187 -52680578 + MER5A DNA MER1_type 60 109 -80 246 264 173 18 chr10 87636441 87636551 -52680214 + MIR SINE MIR 27 153 -109 268 297 22 11 chr10 87636600 87636691 -52680074 + MIR SINE MIR 49 140 -122 200 274 57 65 chr10 87637297 87637421 -52679344 + L2 LINE L2 3138 3260 -12 2293 110 0 0 chr10 87638642 87638933 -52677832 + AluSq SINE Alu 1 291 -22 195 42 0 0 chr10 87638933 87638957 -52677808 + (GA)n Simple_repeat Simple_repeat 2 25 0 180 97 0 0 chr10 87639384 87639415 -52677350 + (CA)n Simple_repeat Simple_repeat 1 31 0 238 366 46 0 chr10 87639629 87639760 -52677005 - MIR SINE MIR -54 208 72 186 184 26 0 chr10 87640515 87640553 -52676212 - MIR SINE MIR -163 99 61 768 249 26 56 chr10 87640870 87641139 -52675626 - MLT1J LTR MaLR -149 362 102 363 191 115 51 chr10 87641282 87641377 -52675388 - MIR SINE MIR -37 225 115 2572 152 44 0 chr10 87641377 87641785 -52674980 - MSTB LTR MaLR 0 426 1 363 191 115 51 chr10 87641785 87641846 -52674919 - MIR SINE MIR -147 115 59 240 35 0 0 chr10 87642240 87642269 -52674496 + (CA)n Simple_repeat Simple_repeat 1 29 0 319 282 86 0 chr10 87642807 87642924 -52673841 - L2 LINE L2 -9 3263 3137 1929 276 67 37 chr10 87643426 87644281 -52672484 + L1M3c LINE L1 10 939 -5202 1221 136 0 51 chr10 87644283 87644497 -52672268 + L1MA9 LINE L1 5672 5874 -438 383 286 165 1 chr10 87645358 87645555 -52671210 - MIR SINE MIR -1 261 36 939 179 10 53 chr10 87645772 87645979 -52670786 + MLT2B1 LTR ERVL 1 198 -322 998 88 18 12 chr10 87645979 87646149 -52670616 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 217 220 55 22 chr10 87646155 87646246 -52670519 + (GAATG)n Simple_repeat Simple_repeat 3 96 0 445 91 13 13 chr10 87646269 87646346 -52670419 + (GGAA)n Simple_repeat Simple_repeat 1 77 0 861 181 207 36 chr10 87646346 87646585 -52670180 + MLT2B2 LTR ERVL 207 515 0 824 181 7 0 chr10 87647241 87647379 -52669386 + FAM SINE Alu 37 175 -10 2226 97 7 0 chr10 87647381 87647693 -52669072 + AluSx SINE Alu 1 314 0 812 233 23 23 chr10 87647703 87647922 -52668843 + AluJo SINE Alu 12 230 -82 1974 196 66 58 chr10 87648017 87648145 -52668620 + LTR53 LTR ERVL 1 127 -392 2279 108 3 3 chr10 87648145 87648450 -52668315 + AluSg SINE Alu 1 305 -5 1974 196 66 58 chr10 87648450 87648836 -52667929 + LTR53 LTR ERVL 127 519 0 234 222 0 0 chr10 87649322 87649367 -52667398 + MIR SINE MIR 129 173 -89 357 197 28 0 chr10 87650930 87651001 -52665764 + LTR16C LTR ERVL 419 491 0 856 171 86 6 chr10 87651242 87651417 -52665348 + MER5A DNA MER1_type 1 189 0 317 237 43 14 chr10 87651562 87651701 -52665064 + (TA)n Simple_repeat Simple_repeat 1 143 0 2213 94 0 3 chr10 87651790 87652076 -52664689 - AluSq SINE Alu -28 285 1 182 244 22 0 chr10 87653155 87653200 -52663565 + L3 LINE CR1 1520 1565 -12 731 189 0 26 chr10 87654378 87654531 -52662234 + AluJb SINE Alu 164 312 0 261 0 0 0 chr10 87654561 87654590 -52662175 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 600 294 87 5 chr10 87654635 87654853 -52661912 + MIR SINE MIR 23 258 -4 328 237 83 45 chr10 87654862 87655018 -52661747 + L1ME4a LINE L1 5957 6118 -3 22 0 0 0 chr10 87655137 87655159 -52661606 + GC_rich Low_complexity Low_complexity 1 22 0 524 300 148 28 chr10 87655694 87656094 -52660671 + L1ME4a LINE L1 5346 5795 -326 180 176 0 0 chr10 87656223 87656257 -52660508 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 256 156 42 135 chr10 87656257 87656353 -52660412 + L1ME4a LINE L1 5935 6021 -100 2899 205 43 21 chr10 87656932 87657665 -52659100 + L1ME1 LINE L1 5427 6332 -2 1491 163 7 33 chr10 87658193 87658469 -52658296 - ERVL LTR ERVL -2051 3713 3445 1849 300 44 46 chr10 87658479 87659233 -52657532 + HERV16 LTR ERVL 2342 3093 -1903 21 0 0 0 chr10 87659546 87659567 -52657198 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 87659902 87659922 -52656843 + (T)n Simple_repeat Simple_repeat 1 20 0 1523 219 99 20 chr10 87660017 87660410 -52656355 + MLT1C LTR MaLR 1 424 -43 259 243 23 90 chr10 87660471 87660617 -52656148 + FLAM_A SINE Alu 5 126 -7 717 145 17 26 chr10 87660995 87661112 -52655653 + FLAM_A SINE Alu 17 132 -10 428 307 83 86 chr10 87661131 87661515 -52655250 + L2 LINE L2 2890 3272 0 774 263 45 24 chr10 87662706 87662953 -52653812 - MLT1I LTR MaLR -140 269 18 298 309 146 18 chr10 87663040 87663205 -52653560 + L3 LINE CR1 1390 1575 -2 271 235 25 25 chr10 87664029 87664110 -52652655 + MLT1E-int LTR MaLR 1654 1734 -1 967 240 86 50 chr10 87664111 87664448 -52652317 + MLT1E LTR MaLR 1 349 -244 865 297 74 31 chr10 87664738 87665468 -52651297 + L1MEc LINE L1 1913 2631 -3584 1483 278 85 34 chr10 87665726 87665747 -52651018 - L2 LINE L2 -1192 2122 2104 2124 66 17 24 chr10 87665747 87666036 -52650729 + AluY SINE Alu 1 287 -24 1483 278 85 34 chr10 87666036 87666316 -52650449 - L2 LINE L2 -1210 2104 1840 2608 143 83 2 chr10 87666316 87666748 -52650017 - MLT1C LTR MaLR 0 467 1 1483 278 85 34 chr10 87666748 87667117 -52649648 - L2 LINE L2 -1474 1840 1417 1624 198 117 11 chr10 87667741 87668099 -52648666 + MSTD LTR MaLR 1 396 0 1529 155 79 14 chr10 87668288 87668566 -52648199 + MSTA LTR MaLR 133 428 0 2081 168 14 48 chr10 87668570 87669011 -52647754 + L1MD3 LINE L1 7570 7995 0 1950 220 0 3 chr10 87669158 87669522 -52647243 - MLT1A1 LTR MaLR 0 365 3 234 174 0 0 chr10 87669546 87669592 -52647173 + (CA)n Simple_repeat Simple_repeat 2 47 0 655 136 18 0 chr10 87669635 87669745 -52647020 + L1MA5 LINE L1 6187 6298 -2 2009 130 33 7 chr10 87669779 87670079 -52646686 + AluSx SINE Alu 1 308 -4 185 185 0 0 chr10 87670128 87670155 -52646610 - MIR SINE MIR -146 62 36 235 268 21 10 chr10 87671717 87671814 -52644951 + L1ME4a LINE L1 5962 6059 -62 26 30 0 0 chr10 87672099 87672132 -52644633 + AT_rich Low_complexity Low_complexity 1 33 0 457 186 93 0 chr10 87672331 87672428 -52644337 + LTR49-int LTR ERV1 2963 3068 -3263 570 115 13 0 chr10 87672428 87672506 -52644259 + AluS SINE Alu 1 79 -233 2074 170 28 25 chr10 87672508 87673016 -52643749 - MLT2A2 LTR ERVL -44 510 1 952 254 47 65 chr10 87673028 87673563 -52643202 - LTR49-int LTR ERV1 -4227 2104 1519 2526 71 0 3 chr10 87673655 87673965 -52642800 + AluY SINE Alu 1 309 -2 1007 220 47 8 chr10 87674569 87674805 -52641960 - PABL_B LTR ERV1 -1 666 422 1925 189 74 38 chr10 87674814 87675285 -52641480 + LTR2B LTR ERV1 3 490 0 11623 175 12 4 chr10 87675285 87677209 -52639556 + HERVE LTR ERV1 1 1940 -5873 7751 49 1 2 chr10 87677369 87678534 -52638231 + L1PA7 LINE L1 4991 6154 0 873 158 140 0 chr10 87678538 87678702 -52638063 + Tigger4(Zombi) DNA MER2_type 2545 2731 0 307 227 273 87 chr10 87679089 87679239 -52637526 - LTR41 LTR ERVL -592 181 4 1325 222 3 38 chr10 87679374 87679694 -52637071 + L1ME1 LINE L1 5851 6159 -7 584 241 9 0 chr10 87680640 87680752 -52636013 + FLAM_A SINE Alu 1 113 -29 188 200 40 80 chr10 87681097 87681147 -52635618 - L2 LINE L2 -20 3293 3246 239 230 129 1 chr10 87681170 87681259 -52635506 + MIR SINE MIR 58 154 -58 547 127 173 0 chr10 87681316 87681426 -52635339 + MLT1B LTR MaLR 1 129 -261 1025 157 6 0 chr10 87681442 87681601 -52635164 + MLT1B LTR MaLR 231 390 0 1678 298 121 19 chr10 87681731 87682519 -52634246 + L2 LINE L2 33 900 -2414 1046 279 73 41 chr10 87682508 87683080 -52633685 - L2 LINE L2 -1 3312 2714 * 789 264 86 11 chr10 87683076 87683407 -52633358 + L2 LINE L2 884 1300 -2014 * 486 290 78 57 chr10 87683614 87684265 -52632500 - L1MEd LINE L1 -4864 1255 591 829 199 48 0 chr10 87684737 87684903 -52631862 + MLT1E1 LTR MaLR 481 654 0 22 0 0 0 chr10 87685409 87685431 -52631334 + AT_rich Low_complexity Low_complexity 1 22 0 2897 197 32 9 chr10 87685463 87686026 -52630739 - MER4D LTR ERV1 0 903 328 597 93 0 0 chr10 87686026 87686101 -52630664 - AluS SINE Alu -228 85 11 838 115 0 0 chr10 87686102 87686272 -52630493 + AluSg/x SINE Alu 170 339 0 871 126 26 13 chr10 87686272 87686423 -52630342 - MER4D LTR ERV1 -572 331 179 32 0 0 0 chr10 87686429 87686461 -52630304 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr10 87686681 87686703 -52630062 + AT_rich Low_complexity Low_complexity 1 22 0 2610 99 13 61 chr10 87686776 87686995 -52629770 - THE1C LTR MaLR 0 375 147 1875 102 8 0 chr10 87686995 87687249 -52629516 + AluSg SINE Alu 55 310 0 2610 99 13 61 chr10 87687249 87687260 -52629505 - THE1C LTR MaLR -228 147 137 2165 102 7 0 chr10 87687260 87687555 -52629210 + AluSp SINE Alu 1 297 -16 2610 99 13 61 chr10 87687555 87687717 -52629048 - THE1C LTR MaLR -238 137 1 37 39 0 0 chr10 87689166 87689217 -52627548 + AT_rich Low_complexity Low_complexity 1 51 0 718 231 100 0 chr10 87689261 87689421 -52627344 - MER45A DNA AcHobo -1 177 2 189 0 0 0 chr10 87689546 87689567 -52627198 + (TG)n Simple_repeat Simple_repeat 2 22 0 2363 105 0 3 chr10 87689606 87689919 -52626846 + AluSq SINE Alu 1 312 -1 210 263 51 68 chr10 87691128 87691246 -52625519 - L2 LINE L2 -193 3079 2964 465 289 21 37 chr10 87691341 87691531 -52625234 - MIR SINE MIR -3 259 73 2054 124 10 13 chr10 87691861 87692175 -52624590 + AluSq SINE Alu 1 313 0 332 206 43 22 chr10 87692615 87692707 -52624058 - HAL1 LINE L1 -343 2164 2071 252 299 32 64 chr10 87692956 87693143 -52623622 - HAL1 LINE L1 -706 1801 1621 575 266 74 26 chr10 87693150 87693379 -52623386 - LTR33A LTR ERVL -20 503 264 406 162 141 50 chr10 87693590 87693689 -52623076 - MER21A LTR ERV1 -20 911 804 542 263 116 50 chr10 87693689 87694163 -52622602 - MER34B LTR ERV1 0 565 5 10692 183 47 46 chr10 87694169 87696468 -52620297 - MER34B-int LTR ERV1 -3 6328 4024 2492 52 0 10 chr10 87696468 87696774 -52619991 + AluY SINE Alu 1 303 -8 10692 183 47 46 chr10 87696774 87697030 -52619735 - MER34B-int LTR ERV1 -2307 4024 3770 1792 167 13 13 chr10 87697031 87697207 -52619558 - AluJb SINE Alu 0 312 137 210 37 0 0 chr10 87697207 87697234 -52619531 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2140 99 0 3 chr10 87697234 87697518 -52619247 - AluY SINE Alu -28 283 1 1792 167 13 13 chr10 87697518 87697652 -52619113 - AluJb SINE Alu -173 139 1 911 286 95 28 chr10 87698278 87698677 -52618088 - L2 LINE L2 -637 2677 2252 212 333 0 0 chr10 87698870 87698924 -52617841 - L2 LINE L2 0 3272 3219 181 321 37 12 chr10 87699141 87699222 -52617543 - MIR SINE MIR -105 103 21 524 282 148 15 chr10 87699527 87699729 -52617036 - MIR SINE MIR -31 231 3 1822 164 0 41 chr10 87700608 87700926 -52615839 - AluJo SINE Alu -7 305 1 1715 161 46 0 chr10 87701274 87701559 -52615206 + AluJo SINE Alu 1 298 -14 757 260 98 10 chr10 87701878 87702082 -52614683 + MLT1H1 LTR MaLR 2 223 -332 1330 132 105 5 chr10 87702084 87702303 -52614462 + AluSx SINE Alu 55 295 -17 1124 277 13 16 chr10 87702303 87702621 -52614144 + MLT1H1 LTR MaLR 221 537 -18 1150 180 141 14 chr10 87702622 87702906 -52613859 - MLT1D LTR MaLR -185 320 1 799 134 118 0 chr10 87703182 87703309 -52613456 + U1 snRNA snRNA 1 142 -23 859 206 71 5 chr10 87704038 87704222 -52612543 - MER58A DNA MER1_type -23 201 6 293 308 150 15 chr10 87704663 87704796 -52611969 - L2 LINE L2 -7 3265 3115 471 363 0 20 chr10 87704893 87705094 -52611671 + LTR67 LTR ERVL 65 261 -296 365 295 33 0 chr10 87705201 87705323 -52611442 + LTR67 LTR ERVL 432 557 0 539 348 60 29 chr10 87705405 87705825 -52610940 - L2 LINE L2 -341 2973 2541 291 270 103 8 chr10 87706657 87706783 -52609982 - LTR16A LTR ERVL -13 437 300 269 271 42 10 chr10 87706869 87706965 -52609800 - LTR16A1 LTR ERVL -301 156 58 1201 56 0 0 chr10 87707159 87707302 -52609463 - L1PA8 LINE L1 0 6172 6030 231 286 103 0 chr10 87707320 87707446 -52609319 + MIR SINE MIR 111 249 -13 235 272 10 29 chr10 87707512 87707615 -52609150 - L1MC/D LINE L1 -1993 5815 5715 1853 175 0 7 chr10 87707986 87708283 -52608482 + AluJb SINE Alu 1 295 -17 214 298 95 0 chr10 87708709 87708793 -52607972 + MIR SINE MIR 163 254 -8 2947 84 3 11 chr10 87709827 87710194 -52606571 - THE1B LTR MaLR 0 364 1 352 231 131 34 chr10 87711310 87711479 -52605286 - MLT1H LTR MaLR -27 522 331 284 0 0 27 chr10 87711915 87711952 -52604813 + (CA)n Simple_repeat Simple_repeat 2 37 0 508 211 149 11 chr10 87713318 87713493 -52603272 + MIR SINE MIR 1 199 -63 912 92 54 0 chr10 87713755 87713885 -52602880 - AluSc SINE Alu -2 307 171 1242 104 6 6 chr10 87713971 87714134 -52602631 - AluSc SINE Alu -146 163 1 705 297 45 0 chr10 87714460 87714682 -52602083 - MIR SINE MIR -3 259 28 387 0 0 0 chr10 87714717 87714760 -52602005 + (TG)n Simple_repeat Simple_repeat 2 44 0 334 241 61 36 chr10 87715933 87716071 -52600694 - MIR SINE MIR -50 212 73 246 333 0 0 chr10 87716070 87716136 -52600629 - L2 LINE L2 -1 3312 3247 * 708 292 82 48 chr10 87716912 87716937 -52599828 + L1ME LINE L1 43 66 -6004 729 228 8 0 chr10 87716937 87717064 -52599701 + FLAM_A SINE Alu 1 128 -5 708 292 82 48 chr10 87717064 87717476 -52599289 + L1ME LINE L1 66 495 -5575 * 763 245 68 110 chr10 87717474 87718177 -52598588 + L1ME LINE L1 749 1332 -4748 2170 145 0 0 chr10 87718177 87718487 -52598278 + AluSx SINE Alu 1 310 -2 763 245 68 110 chr10 87718487 87718696 -52598069 + L1ME LINE L1 1332 1548 -4532 332 235 0 35 chr10 87718863 87718886 -52597879 - LTR50 LTR ERVL -2 793 771 1901 150 17 0 chr10 87718886 87719179 -52597586 + AluSx SINE Alu 1 298 -14 332 235 0 35 chr10 87719179 87719240 -52597525 - LTR50 LTR ERVL -24 771 712 890 186 70 6 chr10 87719298 87719470 -52597295 + MER46B DNA MER2_type 1 58 -178 27225 121 12 72 chr10 87719480 87723549 -52593216 + L1P LINE L1 12 3731 -2415 2797 13 0 0 chr10 87723549 87723850 -52592915 + AluY SINE Alu 1 301 -10 27225 121 12 72 chr10 87723850 87724749 -52592016 + L1P LINE L1 3731 4682 -1464 21 0 0 0 chr10 87724968 87724989 -52591776 + AT_rich Low_complexity Low_complexity 1 21 0 286 246 29 0 chr10 87725053 87725122 -52591643 + MER94 DNA DNA 2 72 -62 2280 147 3 28 chr10 87725512 87725866 -52590899 - MER7A DNA MER2_type -3 343 1 581 244 189 5 chr10 87726254 87726471 -52590294 - MLT1K LTR MaLR -5 583 327 399 230 119 50 chr10 87727015 87727279 -52589486 + MER34 LTR ERV1 392 542 0 279 257 27 0 chr10 87727281 87727355 -52589410 + MLT1J2 LTR MaLR 120 195 -255 * 297 127 16 63 chr10 87727341 87727404 -52589361 - Charlie5 DNA MER1_type -319 2293 2234 296 195 219 71 chr10 87727763 87727932 -52588833 + LTR41 LTR ERVL 1 194 -579 514 207 122 58 chr10 87728240 87728487 -52588278 + LTR41 LTR ERVL 513 795 0 984 231 95 97 chr10 87729540 87730078 -52586687 - MER34 LTR ERV1 -4 538 2 377 223 146 0 chr10 87730354 87730457 -52586308 - L2 LINE L2 -2 3311 3194 408 279 57 36 chr10 87730621 87730761 -52586004 + MIR SINE MIR 47 189 -73 206 234 0 0 chr10 87730811 87730858 -52585907 + (AATTG)n Simple_repeat Simple_repeat 5 51 0 232 293 19 47 chr10 87731030 87731136 -52585629 - MIR SINE MIR -12 250 148 245 390 48 0 chr10 87731222 87731368 -52585397 + L2 LINE L2 2589 2741 -573 481 204 246 7 chr10 87731376 87731518 -52585247 - MER5A DNA MER1_type 0 189 14 2252 111 0 0 chr10 87732149 87732447 -52584318 + AluSg SINE Alu 1 298 -12 209 157 20 39 chr10 87732567 87732618 -52584147 + GA-rich Low_complexity Low_complexity 5 54 0 640 270 150 27 chr10 87733022 87733322 -52583443 - L2 LINE L2 -740 2574 2238 424 306 87 55 chr10 87733353 87733645 -52583120 - L1 LINE L1 -2034 4112 3831 2217 128 0 0 chr10 87733645 87733950 -52582815 + AluSx SINE Alu 1 305 -7 424 306 87 55 chr10 87733950 87734214 -52582551 - L1 LINE L1 -2315 3831 3522 3421 164 15 70 chr10 87734321 87735040 -52581725 + LTR8 LTR ERV1 3 682 -9 215 214 0 0 chr10 87735196 87735238 -52581527 + (CA)n Simple_repeat Simple_repeat 2 43 0 431 287 113 28 chr10 87735277 87735559 -52581206 - L1 LINE L1 -2984 3162 2857 204 289 0 0 chr10 87735738 87735790 -52580975 + MIR SINE MIR 105 156 -106 310 305 52 26 chr10 87736178 87736388 -52580377 + MIR SINE MIR 2 262 0 475 232 54 9 chr10 87736549 87736661 -52580104 + FLAM_A SINE Alu 5 121 -12 401 277 0 22 chr10 87737395 87737532 -52579233 + (CA)n Simple_repeat Simple_repeat 1 134 0 836 259 178 24 chr10 87738069 87738524 -52578241 + MLT1H1 LTR MaLR 31 555 0 185 299 154 0 chr10 87738644 87738761 -52578004 - MIR SINE MIR -58 204 70 417 232 87 40 chr10 87739587 87739735 -52577030 + MIR SINE MIR 1 154 -64 1276 275 97 43 chr10 87739871 87740355 -52576410 + MLT1J LTR MaLR 1 510 -1 247 333 158 0 chr10 87740653 87740773 -52575992 - MIR SINE MIR -7 255 117 525 208 131 30 chr10 87742095 87742263 -52574502 - L2 LINE L2 0 3313 3129 265 323 32 48 chr10 87742324 87742342 -52574423 + LTR16C LTR ERVL 104 121 -370 4999 80 35 0 chr10 87742342 87742979 -52573786 + PABL_A LTR ERV1 1 659 -1 265 323 32 48 chr10 87742979 87743084 -52573681 + LTR16C LTR ERVL 121 225 -266 495 224 119 0 chr10 87743084 87743227 -52573538 + LTR41 LTR ERVL 20 179 -594 363 312 96 74 chr10 87743321 87743645 -52573120 + LTR41 LTR ERVL 361 691 -82 1599 223 94 49 chr10 87743653 87743959 -52572806 - MER74B LTR ERVL -6 616 274 2297 102 13 3 chr10 87743959 87744264 -52572501 - AluSq SINE Alu -5 308 1 1599 223 94 49 chr10 87744264 87744491 -52572274 - MER74B LTR ERVL -348 274 59 387 139 59 16 chr10 87744491 87744593 -52572172 + LTR50 LTR ERVL 687 772 -1 325 260 55 27 chr10 87744729 87744875 -52571890 + L1ME LINE L1 5574 5723 -398 778 191 0 0 chr10 87744923 87745038 -52571727 - FLAM_A SINE Alu -18 115 1 255 250 15 44 chr10 87745085 87745153 -52571612 + L2 LINE L2 3145 3210 -62 382 228 0 63 chr10 87746051 87746178 -52570587 + MER113 DNA MER1_type? 2 120 -401 240 259 52 0 chr10 87746292 87746350 -52570415 + MER113 DNA MER1_type? 458 518 -3 232 204 61 92 chr10 87746792 87746890 -52569875 + MIR3 SINE MIR 66 160 -48 1504 201 25 22 chr10 87747118 87747396 -52569369 + AluJb SINE Alu 1 279 -33 2496 103 26 63 chr10 87748134 87748180 -52568585 - THE1B LTR MaLR 0 364 318 2179 112 0 10 chr10 87748180 87748475 -52568290 + AluSq SINE Alu 1 292 -21 2496 103 26 63 chr10 87748475 87748806 -52567959 - THE1B LTR MaLR -46 318 1 632 307 2 28 chr10 87749109 87749320 -52567445 - MIR SINE MIR -38 224 19 1846 147 6 29 chr10 87749957 87750270 -52566495 + AluSx SINE Alu 1 306 -6 583 167 91 68 chr10 87751590 87751722 -52565043 + FLAM_C SINE Alu 3 137 -6 270 218 69 89 chr10 87751733 87751878 -52564887 + L1MC5 LINE L1 7719 7860 -101 2274 187 21 12 chr10 87751878 87752300 -52564465 + MSTB LTR MaLR 1 426 0 270 218 69 89 chr10 87752300 87752356 -52564409 + L1MC5 LINE L1 7860 7916 -45 1864 171 0 28 chr10 87752384 87752705 -52564060 + AluSx SINE Alu 1 312 0 2235 109 0 3 chr10 87753051 87753363 -52563402 + AluY SINE Alu 1 311 0 216 0 0 0 chr10 87753373 87753397 -52563368 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6164 133 41 32 chr10 87753405 87754064 -52562701 + L1MA4A LINE L1 4558 5209 -1094 13373 27 0 0 chr10 87754064 87756287 -52560478 - L1PA3 LINE L1 -1 6154 3909 6164 133 41 32 chr10 87756287 87757365 -52559400 + L1MA4A LINE L1 5209 6301 -2 391 280 69 37 chr10 87757402 87757591 -52559174 - MER117 DNA MER1_type 0 197 3 1692 128 113 0 chr10 87757670 87757935 -52558830 - AluSx SINE Alu -17 295 1 367 215 315 0 chr10 87759514 87759644 -52557121 + MER5B DNA MER1_type 1 171 -7 255 232 182 0 chr10 87759931 87760030 -52556735 + L2 LINE L2 3197 3313 0 2349 167 63 23 chr10 87760149 87760592 -52556173 - LTR32 LTR ERVL 0 471 11 358 316 36 75 chr10 87760612 87760793 -52555972 - LTR16C LTR ERVL -52 439 277 1358 184 67 21 chr10 87760793 87761075 -52555690 + AluJb SINE Alu 1 295 -17 358 316 36 75 chr10 87761075 87761251 -52555514 - LTR16C LTR ERVL -214 277 96 1691 165 29 4 chr10 87762551 87762824 -52553941 + AluJo SINE Alu 6 285 -27 24 53 0 0 chr10 87762824 87762862 -52553903 + AT_rich Low_complexity Low_complexity 1 38 0 345 279 19 0 chr10 87763184 87763288 -52553477 - MER5A DNA MER1_type -80 109 4 1172 162 22 0 chr10 87763460 87763645 -52553120 - MER5A DNA MER1_type 0 189 1 642 248 33 42 chr10 87763855 87764069 -52552696 - L1MCb LINE L1 -4006 2739 2528 689 209 0 0 chr10 87764089 87764199 -52552566 - FLAM_A SINE Alu -29 113 4 1780 217 134 14 chr10 87764208 87764789 -52551976 - L1MCb LINE L1 -4068 2496 1846 2245 106 0 3 chr10 87765056 87765359 -52551406 + AluSx SINE Alu 1 302 -10 3252 188 49 45 chr10 87766278 87766373 -52550392 - L1MCb LINE L1 -4796 1768 1675 2339 110 0 0 chr10 87766373 87766681 -52550084 + AluSg SINE Alu 1 308 -2 3252 188 49 45 chr10 87766681 87767793 -52548972 - L1MCb LINE L1 -4889 1675 553 1619 294 44 26 chr10 87767834 87768408 -52548357 - L1MCb LINE L1 -5459 586 3 1509 178 43 21 chr10 87768875 87769156 -52547609 + AluJo SINE Alu 1 287 -25 24 0 0 0 chr10 87769156 87769180 -52547585 + AT_rich Low_complexity Low_complexity 1 24 0 763 239 43 62 chr10 87769425 87769671 -52547094 + MIR SINE MIR 15 259 -3 1686 96 0 0 chr10 87769856 87770074 -52546691 + AluSc SINE Alu 72 289 -20 2583 182 24 44 chr10 87770288 87770420 -52546345 - MER41B LTR ERV1 -5 599 466 2286 100 0 0 chr10 87770420 87770721 -52546044 + AluSg SINE Alu 1 301 -9 2583 182 24 44 chr10 87770721 87771037 -52545728 - MER41B LTR ERV1 -138 466 210 2141 119 0 3 chr10 87771037 87771331 -52545434 - AluSx SINE Alu -4 308 16 2583 182 24 44 chr10 87771331 87771452 -52545313 - MER41B LTR ERV1 -394 210 88 482 0 17 0 chr10 87771491 87771549 -52545216 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 620 309 48 24 chr10 87771553 87771889 -52544876 + L1ME4a LINE L1 5603 5946 -175 491 134 0 0 chr10 87872378 87872460 -52444305 + L1PB3 LINE L1 6070 6151 -3 22 0 0 0 chr10 87872474 87872496 -52444269 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 87872552 87872573 -52444192 + AT_rich Low_complexity Low_complexity 1 21 0 408 239 29 14 chr10 87873867 87874005 -52442760 + L1MD3 LINE L1 5694 5833 -1975 1061 113 0 0 chr10 87874005 87874146 -52442619 + AluJb SINE Alu 1 141 -171 33 0 0 0 chr10 87874191 87874224 -52442541 + AT_rich Low_complexity Low_complexity 1 33 0 734 193 40 147 chr10 87874274 87874624 -52442141 + L1MD3 LINE L1 6172 6284 -1524 315 0 0 0 chr10 87874624 87874659 -52442106 + (CA)n Simple_repeat Simple_repeat 2 36 0 734 193 40 147 chr10 87874659 87874949 -52441816 + L1MD3 LINE L1 6284 6603 -1205 2374 100 0 0 chr10 87876133 87876442 -52440323 - AluY SINE Alu -2 309 1 378 196 123 0 chr10 87876610 87876748 -52440017 + L1 LINE L1 3126 3280 -2866 234 0 0 0 chr10 87877791 87877817 -52438948 + (T)n Simple_repeat Simple_repeat 1 26 0 790 134 0 0 chr10 87878607 87878726 -52438039 + LTR12 LTR ERV1 348 466 -248 1736 197 0 16 chr10 87879934 87880249 -52436516 - AluJo SINE Alu -2 310 1 4781 195 59 7 chr10 87880670 87881755 -52435010 + L1 LINE L1 3268 4418 -1728 270 0 0 0 chr10 87881755 87881785 -52434980 + (CA)n Simple_repeat Simple_repeat 2 31 0 4781 195 59 7 chr10 87881785 87881852 -52434913 + L1 LINE L1 4418 4480 -1666 2246 96 0 0 chr10 87882075 87882367 -52434398 + AluSx SINE Alu 3 294 -18 660 225 102 54 chr10 87883144 87883477 -52433288 - HAL1 LINE L1 -1319 1188 840 263 206 138 0 chr10 87883655 87883789 -52432976 + AluYa8 SINE Alu 1 130 -170 289 248 55 64 chr10 87883960 87884178 -52432587 + L1MC4 LINE L1 7825 8040 -2 242 284 11 21 chr10 87884181 87884276 -52432489 - L3b LINE CR1 -331 1252 1159 5451 55 18 20 chr10 87884410 87885154 -52431611 + SVA Other Other 1 742 -644 192 272 87 43 chr10 87885926 87886018 -52430747 + MIR3 SINE MIR 2 97 -111 1834 125 18 4 chr10 87886133 87886405 -52430360 + AluSg SINE Alu 21 296 -14 357 307 19 23 chr10 87886644 87886901 -52429864 + L1ME3A LINE L1 4957 5212 -934 1270 248 101 20 chr10 87886986 87887629 -52429136 + L1ME3A LINE L1 5262 5979 -187 1103 191 131 20 chr10 87887765 87888063 -52428702 - L2 LINE L2 -1294 2020 1690 1398 84 90 17 chr10 87888097 87888418 -52428347 - MER4C LTR ERV1 0 465 88 2040 101 25 35 chr10 87888419 87888735 -52428030 + AluSq SINE Alu 1 313 0 377 218 0 11 chr10 87888771 87888858 -52427907 - MER4C LTR ERV1 -364 101 16 1164 246 150 76 chr10 87889370 87889552 -52427213 + L1M4 LINE L1 3574 3741 -2405 606 205 8 17 chr10 87889552 87889669 -52427096 + FLAM_A SINE Alu 1 116 -17 1164 246 150 76 chr10 87889669 87889689 -52427076 + L1M4 LINE L1 3741 3758 -2388 2448 76 0 0 chr10 87889689 87889990 -52426775 + AluSx SINE Alu 1 301 -11 1164 246 150 76 chr10 87889990 87890861 -52425904 + L1M4 LINE L1 3758 4727 -1419 5494 147 22 16 chr10 87891094 87892150 -52424615 - L1P LINE L1 -1588 4558 3497 1928 138 40 0 chr10 87892687 87892984 -52423781 - AluSx SINE Alu -3 309 1 219 258 97 75 chr10 87893051 87893144 -52423621 + L2 LINE L2 2397 2491 -823 335 350 17 16 chr10 87894344 87894532 -52422233 - MLT1I LTR MaLR -194 215 27 2026 150 63 12 chr10 87895909 87896533 -52420232 + MER39 LTR ERV1 1 707 0 2321 120 33 8 chr10 87896538 87896904 -52419861 + THE1C LTR MaLR 1 375 0 1228 152 5 10 chr10 87897402 87897600 -52419165 + AluJb SINE Alu 98 294 -18 322 273 107 16 chr10 87897651 87897893 -52418872 + HAL1b LINE L1 126 389 -959 333 304 149 23 chr10 87897989 87898203 -52418562 + L2 LINE L2 2509 2749 -565 183 333 17 17 chr10 87898491 87898551 -52418214 + L2 LINE L2 3127 3186 -86 228 264 0 0 chr10 87898686 87898739 -52418026 + MER117 DNA MER1_type 36 88 -109 842 167 0 0 chr10 87898739 87898865 -52417900 + FLAM_C SINE Alu 1 126 -17 1145 163 70 54 chr10 87899382 87899826 -52416939 - L1M4 LINE L1 -676 5498 5049 848 169 0 21 chr10 87899826 87899968 -52416797 - FLAM_C SINE Alu -4 139 1 374 212 35 9 chr10 87899968 87900081 -52416684 - L1M4 LINE L1 -1091 5055 4940 2029 111 4 4 chr10 87900154 87900433 -52416332 + AluSq SINE Alu 21 299 -14 434 186 0 0 chr10 87900443 87900513 -52416252 + AluJ/FLAM SINE Alu 1 70 -242 2078 253 42 9 chr10 87900513 87901275 -52415490 + L1M4 LINE L1 2936 3722 -2424 924 149 11 35 chr10 87901276 87901450 -52415315 - MER54B LTR ERVL -1 792 623 485 99 25 0 chr10 87901570 87901651 -52415114 + L1PA16 LINE L1 6077 6159 -7 180 0 0 0 chr10 87901654 87901674 -52415091 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1252 124 0 11 chr10 87901705 87901882 -52414883 + AluSg/x SINE Alu 121 295 -17 654 191 286 4 chr10 87901895 87902136 -52414629 + MER34C LTR ERV1 258 566 -19 24 32 0 0 chr10 87902342 87902373 -52414392 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 87902425 87902449 -52414316 + GC_rich Low_complexity Low_complexity 1 24 0 294 304 36 0 chr10 87904683 87904821 -52411944 - L1MC4a LINE L1 -1853 5955 5813 278 232 12 73 chr10 87905456 87905490 -52411275 - MER31B LTR ERV1 -389 77 42 1639 131 6 97 chr10 87905490 87905810 -52410955 + AluJo SINE Alu 1 291 -21 278 232 12 73 chr10 87905810 87905857 -52410908 - MER31B LTR ERV1 -424 42 1 268 344 82 8 chr10 87906981 87907103 -52409662 - L2 LINE L2 -5 3267 3137 357 24 0 0 chr10 87907180 87907222 -52409543 + (TG)n Simple_repeat Simple_repeat 2 43 0 2737 252 63 17 chr10 87907772 87908767 -52407998 - L1ME1 LINE L1 -17 6149 5104 198 103 0 0 chr10 87909035 87909064 -52407701 + (TTCC)n Simple_repeat Simple_repeat 2 30 0 2220 115 6 3 chr10 87909578 87909890 -52406875 - AluSq SINE Alu 0 313 1 622 139 57 0 chr10 87909910 87910032 -52406733 - FLAM_C SINE Alu -4 129 1 257 200 15 0 chr10 87910242 87910307 -52406458 + L1MA10 LINE L1 6170 6235 -99 5227 118 11 6 chr10 87910339 87911185 -52405580 - L1PA11 LINE L1 0 6174 5325 1184 138 25 10 chr10 87911329 87911532 -52405233 + MER21A LTR ERV1 723 928 -3 583 276 108 41 chr10 87911533 87912113 -52404652 + L1M4 LINE L1 2985 3606 -2540 258 242 215 41 chr10 87912253 87912472 -52404293 + L1M4 LINE L1 3683 3939 -2207 509 269 112 51 chr10 87912668 87912999 -52403766 + L1M4 LINE L1 4204 4554 -1592 675 147 69 9 chr10 87913055 87913171 -52403594 + FLAM_C SINE Alu 11 133 -10 345 326 0 8 chr10 87913175 87913307 -52403458 + L1M4 LINE L1 4577 4707 -1439 737 188 110 47 chr10 87913564 87913819 -52402946 + L1MC/D LINE L1 3902 4172 -1974 2463 225 67 16 chr10 87913846 87914839 -52401926 + L1MC/D LINE L1 4530 5575 -667 2162 135 3 0 chr10 87915918 87916229 -52400536 - AluSx SINE Alu 0 312 1 341 219 140 0 chr10 87916419 87916533 -52400232 - L1MC5 LINE L1 -796 7165 7036 318 205 229 95 chr10 87916639 87916781 -52399984 - L1ME3 LINE L1 -9 6153 5973 714 242 21 26 chr10 87916781 87916971 -52399794 + MER5A DNA MER1_type 1 189 0 318 205 229 95 chr10 87916971 87917038 -52399727 - L1ME3 LINE L1 -189 5973 5916 456 256 107 14 chr10 87917090 87917436 -52399329 - L1MCc LINE L1 -5813 610 185 1511 243 46 15 chr10 87917537 87917932 -52398833 - L1MC4 LINE L1 -1161 6881 6475 1553 146 28 8 chr10 87917932 87918185 -52398580 - Tigger3(Golem) DNA MER2_type 0 3029 2772 745 177 20 54 chr10 87918182 87918329 -52398436 - Tigger3(Golem) DNA MER2_type -2887 142 1 * 5312 175 35 14 chr10 87919193 87920877 -52395888 - L1PB4 LINE L1 -329 5827 4114 9587 87 0 23 chr10 87921430 87922734 -52394031 + HERVL-A1 LTR ERVL 4381 5654 0 1256 134 36 26 chr10 87922734 87923088 -52393677 + MLT2A1 LTR ERVL 1 265 -188 666 202 0 0 chr10 87923195 87923314 -52393451 + FLAM_A SINE Alu 10 128 -14 1692 162 36 26 chr10 87923317 87923626 -52393139 + AluSx SINE Alu 1 312 0 836 331 77 10 chr10 87923936 87924341 -52392424 + L3 LINE CR1 1134 1565 -12 416 282 57 43 chr10 87924326 87924535 -52392230 - L2 LINE L2 -5 3308 3097 * 1746 167 7 7 chr10 87924698 87924986 -52391779 - AluJb SINE Alu -24 288 1 354 234 259 6 chr10 87925682 87925840 -52390925 - L2 LINE L2 0 3313 3116 886 173 60 0 chr10 87929265 87929415 -52387350 - AluJb SINE Alu -153 159 1 3271 213 81 24 chr10 87929437 87930313 -52386452 - L1ME2 LINE L1 -8 6156 5232 2207 117 0 0 chr10 87930418 87930708 -52386057 - AluSx SINE Alu -20 292 3 347 123 35 0 chr10 87930995 87931052 -52385713 + MSTA LTR MaLR 1 59 -369 1289 129 36 141 chr10 87931560 87931894 -52384871 - AluJo SINE Alu -3 299 1 2068 109 0 7 chr10 87932406 87932714 -52384051 + AluSg SINE Alu 1 306 0 1869 171 10 0 chr10 87932719 87933023 -52383742 + AluJo SINE Alu 1 307 -5 2080 110 24 3 chr10 87933159 87933450 -52383315 - AluSx SINE Alu -15 297 1 505 217 143 53 chr10 87933451 87933640 -52383125 - MLT1E2 LTR MaLR -333 293 88 769 192 0 0 chr10 87933791 87933921 -52382844 + FLAM_A SINE Alu 1 130 -3 1442 169 47 36 chr10 87933954 87934232 -52382533 + AluJo SINE Alu 1 281 -31 220 194 254 15 chr10 87934267 87934334 -52382431 - L2 LINE L2 -5 3267 3185 1505 210 0 17 chr10 87934819 87935119 -52381646 + AluJo SINE Alu 3 297 -15 436 307 114 0 chr10 87937374 87937550 -52379215 + MIR SINE MIR 47 242 -20 384 342 128 16 chr10 87938645 87938902 -52377863 + L2 LINE L2 210 495 -2819 1918 128 0 85 chr10 87939106 87939472 -52377293 - MER1B DNA MER1_type 0 337 3 1765 216 135 41 chr10 87939474 87939932 -52376833 - L1M4 LINE L1 -1900 4744 4196 282 56 0 0 chr10 87939932 87939968 -52376797 + (TA)n Simple_repeat Simple_repeat 1 36 0 1765 216 135 41 chr10 87939968 87940213 -52376552 - L1M4 LINE L1 -2448 4196 3975 522 164 66 8 chr10 87940214 87940336 -52376429 - L1M4 LINE L1 -3483 3161 3033 * 1243 211 105 63 chr10 87940323 87940770 -52375995 - L1M4 LINE L1 -4643 2003 1537 3290 220 56 63 chr10 87940834 87941863 -52374902 - L1M4 LINE L1 -5503 1039 18 5728 167 44 39 chr10 87941909 87942411 -52374354 - L1MC2 LINE L1 -9 6335 5837 1767 160 14 7 chr10 87942411 87942699 -52374066 + AluJb SINE Alu 1 290 -22 5728 167 44 39 chr10 87942699 87943194 -52373571 - L1MC2 LINE L1 -507 5837 5346 1918 103 29 32 chr10 87943194 87943506 -52373259 - L1PA16 LINE L1 -1 6165 5855 5728 167 44 39 chr10 87943506 87944236 -52372529 - L1MC2 LINE L1 -998 5346 4582 276 130 0 0 chr10 87944378 87944424 -52372341 + (CA)n Simple_repeat Simple_repeat 1 46 0 357 265 106 18 chr10 87945429 87945599 -52371166 + L1MC4 LINE L1 7856 8040 -2 773 296 18 14 chr10 87945622 87945842 -52370923 - MIR SINE MIR -1 261 41 200 279 152 0 chr10 87946125 87946204 -52370561 - MIR SINE MIR -73 135 45 207 157 0 0 chr10 87946591 87946642 -52370123 + A-rich Low_complexity Low_complexity 1 51 0 2379 56 13 3 chr10 87947000 87947306 -52369459 + AluY SINE Alu 1 309 -2 2426 64 0 0 chr10 87947307 87947605 -52369160 + AluY SINE Alu 2 299 -12 189 0 0 0 chr10 87948083 87948104 -52368661 + (CA)n Simple_repeat Simple_repeat 2 22 0 318 80 0 0 chr10 87948104 87948154 -52368611 + (GA)n Simple_repeat Simple_repeat 1 50 0 2145 104 17 0 chr10 87948189 87948477 -52368288 + AluSx SINE Alu 1 293 -19 1423 123 0 5 chr10 87948663 87948866 -52367899 - AluSg/x SINE Alu -10 300 99 420 274 189 0 chr10 87949858 87950011 -52366754 + MIR SINE MIR 65 246 -16 219 69 0 0 chr10 87950134 87950163 -52366602 + (T)n Simple_repeat Simple_repeat 1 29 0 1332 275 87 55 chr10 87951484 87952511 -52364254 - HAL1 LINE L1 -617 1890 831 2506 71 7 0 chr10 87952699 87953008 -52363757 - AluY SINE Alu 0 311 1 252 308 75 8 chr10 87953211 87953344 -52363421 + L1MC4 LINE L1 7606 7747 -295 227 213 0 0 chr10 87953378 87953425 -52363340 + L1ME LINE L1 5870 5916 -205 7082 55 8 0 chr10 87953669 87955106 -52361659 + L1PA7 LINE L1 4718 6154 0 233 302 47 64 chr10 87955800 87955972 -52360793 - MIR SINE MIR -47 215 47 2362 79 0 0 chr10 87956113 87956405 -52360360 - AluY SINE Alu -19 292 1 1923 212 104 25 chr10 87956439 87957004 -52359761 - L1ME3A LINE L1 -5 6165 5556 971 263 60 40 chr10 87957776 87958354 -52358411 - L1ME3A LINE L1 -221 5949 5357 740 289 34 25 chr10 87958368 87958721 -52358044 - L1ME3A LINE L1 -866 5280 4925 790 171 104 0 chr10 87958755 87958919 -52357846 - AluJb SINE Alu -5 307 127 1702 221 31 16 chr10 87959535 87959988 -52356777 - L1ME1 LINE L1 -5 6161 5702 2132 123 0 0 chr10 87960045 87960337 -52356428 + AluSx SINE Alu 1 292 -20 397 280 68 26 chr10 87960359 87960516 -52356249 + MIR SINE MIR 43 211 -51 2181 93 26 7 chr10 87960523 87960825 -52355940 + AluSp SINE Alu 1 308 -5 427 274 60 6 chr10 87961182 87961350 -52355415 - MER112 DNA MER1_type -17 243 67 304 255 53 11 chr10 87961932 87962026 -52354739 + L1M4 LINE L1 4572 4669 -1477 976 215 0 0 chr10 87962222 87962394 -52354371 - FAM SINE Alu 0 175 4 246 231 185 0 chr10 87963621 87963686 -52353079 + MIR SINE MIR 183 259 -3 386 220 22 0 chr10 87964259 87964350 -52352415 - MER58 DNA MER1_type 0 2420 2328 406 220 99 11 chr10 87964364 87964455 -52352310 - MER58 DNA MER1_type -241 100 2 571 296 49 27 chr10 87964466 87964872 -52351893 - L1M4 LINE L1 -3420 2726 2312 1743 205 66 23 chr10 87964947 87965386 -52351379 - MLT1C LTR MaLR -4 463 6 231 173 77 0 chr10 87965392 87965444 -52351321 - L1ME1 LINE L1 -4 6422 6367 2406 103 26 9 chr10 87965802 87966151 -52350614 + THE1B LTR MaLR 1 355 -9 2225 117 13 0 chr10 87966220 87966528 -52350237 - AluSx SINE Alu 0 312 1 2552 229 81 25 chr10 87967159 87967937 -52348828 - L1ME1 LINE L1 -120 6306 5497 516 87 87 0 chr10 87968157 87968420 -52348345 + (TA)n Simple_repeat Simple_repeat 1 285 0 494 113 49 0 chr10 87968453 87968595 -52348170 + (TA)n Simple_repeat Simple_repeat 1 149 0 21 0 0 0 chr10 87968595 87968616 -52348149 + AT_rich Low_complexity Low_complexity 1 21 0 205 100 40 0 chr10 87968621 87968671 -52348094 + (TA)n Simple_repeat Simple_repeat 1 52 0 2048 109 0 17 chr10 87968675 87968977 -52347788 - AluSx SINE Alu 0 312 16 4745 216 76 87 chr10 87968994 87969956 -52346809 - L1ME1 LINE L1 -997 5409 4438 1730 146 8 0 chr10 87969956 87970216 -52346549 - AluSx SINE Alu -13 299 38 4745 216 76 87 chr10 87970216 87970486 -52346279 - L1ME1 LINE L1 -1968 4438 4167 1610 203 0 4 chr10 87970486 87970767 -52345998 - AluJb SINE Alu -30 282 3 4745 216 76 87 chr10 87970767 87971033 -52345732 - L1ME1 LINE L1 -2239 4167 3900 1958 116 0 50 chr10 87971033 87971335 -52345430 - AluSx SINE Alu -10 302 16 4745 216 76 87 chr10 87971335 87972256 -52344509 - L1ME1 LINE L1 -2506 3900 3015 1245 242 67 33 chr10 87972266 87972992 -52343773 - L1ME1 LINE L1 -4916 1490 773 222 239 11 87 chr10 87973652 87973744 -52343021 - MER5A DNA MER1_type -14 175 91 917 234 39 52 chr10 87974155 87974441 -52342324 - L1ME3 LINE L1 -8 6154 5873 549 249 94 40 chr10 87975561 87975762 -52341003 - MLT1I LTR MaLR -17 392 181 468 0 0 0 chr10 87976185 87976237 -52340528 + (TG)n Simple_repeat Simple_repeat 1 52 0 2289 113 0 3 chr10 87976260 87976569 -52340196 - AluSx SINE Alu -2 310 3 2256 82 41 0 chr10 87976690 87976983 -52339782 - AluY SINE Alu -6 305 1 2431 62 0 34 chr10 87977436 87977758 -52339007 - AluY SINE Alu 0 311 1 208 358 69 47 chr10 87977774 87978048 -52338717 + L2 LINE L2 1462 1741 -1573 246 105 0 0 chr10 87978408 87978446 -52338319 + (TG)n Simple_repeat Simple_repeat 1 38 0 433 172 17 78 chr10 87978490 87978606 -52338159 + LTR29 LTR ERV1 1 109 -513 228 352 151 48 chr10 87978616 87978974 -52337791 + L2 LINE L2 2340 2734 -580 884 125 7 0 chr10 87979281 87979425 -52337340 + L1MA5A LINE L1 6153 6297 0 270 246 0 0 chr10 87979457 87979514 -52337251 + MIR SINE MIR 204 260 -2 253 241 62 62 chr10 87979710 87979822 -52336943 - L1ME3 LINE L1 -452 5669 5558 21 36 0 0 chr10 87980108 87980136 -52336629 + AT_rich Low_complexity Low_complexity 1 28 0 187 335 90 13 chr10 87980782 87980937 -52335828 + L2 LINE L2 2854 3020 -252 216 0 0 0 chr10 87980959 87980983 -52335782 + (T)n Simple_repeat Simple_repeat 1 24 0 400 296 89 0 chr10 87980993 87981128 -52335637 + MIR SINE MIR 113 259 -3 34 0 0 0 chr10 87982751 87982785 -52333980 + AT_rich Low_complexity Low_complexity 1 34 0 21 57 0 0 chr10 87982906 87982941 -52333824 + AT_rich Low_complexity Low_complexity 1 35 0 2109 122 0 10 chr10 87983232 87983528 -52333237 + AluSx SINE Alu 1 293 -19 342 270 81 44 chr10 87983713 87984009 -52332756 - L1MC5 LINE L1 -232 7729 7423 354 321 133 18 chr10 87984684 87984849 -52331916 + MIR3 SINE MIR 18 201 -7 289 255 157 83 chr10 87985188 87985324 -52331441 + MIR SINE MIR 2 161 -101 2468 81 0 7 chr10 87985324 87985633 -52331132 + AluSx SINE Alu 1 307 -5 289 255 157 83 chr10 87985633 87985712 -52331053 + MIR SINE MIR 161 233 -29 275 271 57 0 chr10 87985945 87986015 -52330750 - MLT1L LTR MaLR -215 400 327 355 235 132 37 chr10 87986082 87986218 -52330547 - MLT1L LTR MaLR -369 246 98 293 176 0 0 chr10 87986431 87986482 -52330283 + Tigger5 DNA MER2_type 29 79 -2244 416 218 0 13 chr10 87986483 87986561 -52330204 - Tigger5 DNA MER2_type -5 2318 2242 246 261 0 0 chr10 87986572 87986618 -52330147 + Tigger5 DNA MER2_type 2278 2323 0 1583 190 3 14 chr10 87986791 87987081 -52329684 - AluJb SINE Alu -25 287 1 2363 81 3 0 chr10 87987381 87987688 -52329077 - AluY SINE Alu -3 308 1 456 360 7 0 chr10 87990140 87990290 -52326475 - MIR3 SINE MIR -28 180 30 250 188 62 0 chr10 87990514 87990562 -52326203 - L2 LINE L2 -6 3307 3257 1694 160 82 0 chr10 87991000 87991268 -52325497 - AluJb SINE Alu -22 290 1 269 305 42 47 chr10 87991588 87991801 -52324964 - L1ME4a LINE L1 -25 6096 5885 36 23 0 0 chr10 87992318 87992361 -52324404 + AT_rich Low_complexity Low_complexity 1 43 0 683 200 87 0 chr10 87992835 87992985 -52323780 + MER3 DNA MER1_type 47 209 0 2107 100 0 0 chr10 87994084 87994355 -52322410 + AluSp SINE Alu 29 299 -14 1963 128 6 40 chr10 87994722 87994899 -52321866 - AluSx SINE Alu -2 310 128 396 0 0 0 chr10 87994899 87994943 -52321822 + (TA)n Simple_repeat Simple_repeat 1 44 0 2050 76 79 11 chr10 87994944 87995221 -52321544 - AluY SINE Alu -15 296 1 1963 128 6 40 chr10 87995221 87995362 -52321403 - AluSx SINE Alu -183 129 1 246 128 0 0 chr10 87995423 87995462 -52321303 + (TG)n Simple_repeat Simple_repeat 2 40 0 1454 242 96 20 chr10 87996052 87996552 -52320213 - L1MD2 LINE L1 -49 6704 6167 410 238 10 0 chr10 87996575 87996676 -52320089 - L1MD2 LINE L1 -1597 4943 4842 42064 57 2 0 chr10 87996689 88002822 -52313943 - L1PA5 LINE L1 0 6154 13 3798 242 38 21 chr10 88002867 88002943 -52313822 - L1MD2 LINE L1 -1756 4784 4711 2220 114 0 3 chr10 88002943 88003250 -52313515 + AluY SINE Alu 1 306 -5 3798 242 38 21 chr10 88003250 88004405 -52312360 - L1MD2 LINE L1 -1829 4711 3532 3243 135 9 36 chr10 88004409 88004614 -52312151 - MER41B LTR ERV1 -89 546 337 3443 138 0 31 chr10 88004614 88005158 -52311607 - MER1A DNA MER1_type 0 527 1 3243 135 9 36 chr10 88005158 88005509 -52311256 - MER41B LTR ERV1 -298 337 5 1373 169 13 0 chr10 88005510 88005741 -52311024 - MER41B-int LTR ERV1 -3 5943 5710 800 163 28 0 chr10 88005767 88005908 -52310857 - MER41A LTR ERV1 0 554 410 2115 236 113 16 chr10 88005913 88007189 -52309576 - L1MD2 LINE L1 -2995 3545 2163 1575 214 92 43 chr10 88007187 88007232 -52309533 - L1MD2 LINE L1 -6068 472 431 * 2529 50 0 0 chr10 88007232 88007530 -52309235 - AluY SINE Alu -13 298 1 1575 214 92 43 chr10 88007530 88007929 -52308836 - L1MD2 LINE L1 -6109 431 6 204 270 20 90 chr10 88008416 88008516 -52308249 - MER5B DNA MER1_type -76 102 10 439 324 64 6 chr10 88008844 88009017 -52307748 - MIR3 SINE MIR -9 199 17 226 336 93 0 chr10 88009792 88009899 -52306866 + MIR3 SINE MIR 83 199 -9 2169 105 0 3 chr10 88010085 88010380 -52306385 - AluSg SINE Alu -16 294 1 32 0 0 0 chr10 88010603 88010635 -52306130 + AT_rich Low_complexity Low_complexity 1 32 0 303 71 0 0 chr10 88012780 88012822 -52303943 + (TA)n Simple_repeat Simple_repeat 2 43 0 2387 85 0 3 chr10 88013310 88013616 -52303149 - AluY SINE Alu -6 305 1 2243 74 3 14 chr10 88013888 88014184 -52302581 + AluY SINE Alu 1 293 -18 190 217 33 33 chr10 88014412 88014472 -52302293 + MIR SINE MIR 110 169 -93 314 263 123 114 chr10 88015645 88015881 -52300884 - MIR SINE MIR -7 255 18 300 284 124 42 chr10 88016019 88016325 -52300440 - L1ME4a LINE L1 -195 5926 5596 2175 98 0 11 chr10 88017457 88017742 -52299023 + AluSg SINE Alu 1 314 0 289 0 0 0 chr10 88017742 88017774 -52298991 + (TAAA)n Simple_repeat Simple_repeat 2 176 0 22 0 0 0 chr10 88018932 88018954 -52297811 + AT_rich Low_complexity Low_complexity 1 22 0 315 327 63 19 chr10 88019046 88019205 -52297560 + MIR SINE MIR 41 206 -56 332 276 95 71 chr10 88019270 88019480 -52297285 - MIR SINE MIR -11 251 37 215 232 0 95 chr10 88019796 88019891 -52296874 - MIR SINE MIR -2 260 175 186 133 0 0 chr10 88020238 88020268 -52296497 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 311 376 70 29 chr10 88021131 88021474 -52295291 + L2 LINE L2 2904 3260 -12 37 0 0 0 chr10 88021961 88021998 -52294767 + AT_rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr10 88023313 88023342 -52293423 + (TG)n Simple_repeat Simple_repeat 1 29 0 221 0 35 0 chr10 88023341 88023370 -52293395 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 216 272 37 0 chr10 88025854 88025935 -52290830 + (CATATA)n Simple_repeat Simple_repeat 5 88 0 * 221 238 0 0 chr10 88025894 88025936 -52290829 + (CA)n Simple_repeat Simple_repeat 2 43 0 1953 110 0 8 chr10 88026378 88026642 -52290123 - AluSx SINE Alu -3 309 48 25 0 0 0 chr10 88027557 88027582 -52289183 + AT_rich Low_complexity Low_complexity 1 25 0 1493 155 33 18 chr10 88030126 88030461 -52286304 - MER61C LTR ERV1 0 434 1 2185 143 74 11 chr10 88031231 88031665 -52285100 - L1MA4 LINE L1 -1 6299 5839 2036 112 3 30 chr10 88034994 88035299 -52281466 - AluSx SINE Alu -9 303 7 185 0 40 0 chr10 88035359 88035384 -52281381 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1188 147 0 11 chr10 88035458 88035635 -52281130 + AluJb SINE Alu 124 298 -14 1209 225 59 4 chr10 88035638 88036036 -52280729 - L1MB7 LINE L1 -73 6105 5667 2002 118 0 0 chr10 88036036 88036316 -52280449 + MER61E LTR ERV1 1 280 -289 5898 66 33 5 chr10 88036316 88037075 -52279690 - LTR17 LTR ERV1 0 780 1 2459 62 0 0 chr10 88037075 88037367 -52279398 - HERV17 LTR ERV1 0 8626 8335 303 51 0 0 chr10 88037357 88037396 -52279369 - HERV17 LTR ERV1 -1078 7548 7510 * 5061 52 8 3 chr10 88037389 88038001 -52278764 - HERV17 LTR ERV1 -2607 6019 5405 * 11037 55 3 4 chr10 88037980 88039306 -52277459 - HERV17 LTR ERV1 -4872 3754 2430 * 15606 64 32 6 chr10 88039298 88041254 -52275511 - HERV17 LTR ERV1 -6619 2007 1 5884 75 30 5 chr10 88041254 88042015 -52274750 - LTR17 LTR ERV1 0 780 1 1398 187 8 23 chr10 88042015 88042272 -52274493 + MER61E LTR ERV1 277 529 -40 4822 208 43 25 chr10 88042279 88043639 -52273126 - L1MB7 LINE L1 -514 5670 4336 2247 120 67 6 chr10 88043639 88043981 -52272784 + THE1B LTR MaLR 2 364 0 9901 104 45 38 chr10 88043981 88044397 -52272368 + THE1B-int LTR MaLR 1 413 -1167 2368 91 3 0 chr10 88044397 88044693 -52272072 - AluSp SINE Alu -12 301 5 9901 104 45 38 chr10 88044693 88045845 -52270920 + THE1B-int LTR MaLR 413 1580 0 2244 151 6 14 chr10 88045845 88046075 -52270690 + THE1B LTR MaLR 1 228 -136 2632 58 0 3 chr10 88046075 88046387 -52270378 + AluY SINE Alu 1 311 0 2244 151 6 14 chr10 88046387 88046521 -52270244 + THE1B LTR MaLR 228 362 -2 4822 208 43 25 chr10 88046521 88046667 -52270098 - L1MB7 LINE L1 -1847 4337 4139 650 239 78 18 chr10 88048137 88048355 -52268410 - MIR SINE MIR -29 233 3 1155 203 83 5 chr10 88049193 88049495 -52267270 + MER33 DNA MER1_type 1 310 -14 2139 134 76 15 chr10 88050485 88050828 -52265937 - THE1B LTR MaLR 0 364 1 227 295 26 13 chr10 88052740 88052818 -52263947 + MLT1I LTR MaLR 229 307 -102 412 86 29 0 chr10 88053115 88053185 -52263580 + (TG)n Simple_repeat Simple_repeat 2 73 0 295 326 163 18 chr10 88054775 88055057 -52261708 - MLT1K LTR MaLR -113 475 153 1897 142 3 45 chr10 88055585 88055768 -52260997 - AluJo SINE Alu -14 298 132 1939 89 19 92 chr10 88055768 88056082 -52260683 + AluSx SINE Alu 1 291 -21 1897 142 3 45 chr10 88056082 88056209 -52260556 - AluJo SINE Alu -180 132 1 330 326 55 33 chr10 88056465 88056738 -52260027 - L1ME3A LINE L1 -312 5858 5580 722 200 7 7 chr10 88056762 88056897 -52259868 + AluJb SINE Alu 164 298 -14 259 324 60 0 chr10 88056931 88057058 -52259707 - L1M1 LINE L1 -710 5452 5338 249 262 83 0 chr10 88057886 88057970 -52258795 + L2 LINE L2 3160 3250 -22 2269 107 0 0 chr10 88057974 88058273 -52258492 - AluSx SINE Alu -13 299 1 326 282 88 69 chr10 88058305 88058610 -52258155 + L1M4 LINE L1 4526 4836 -1310 1400 157 10 57 chr10 88058684 88058984 -52257781 - LTR55 LTR ERV -262 286 1 566 261 45 27 chr10 88059165 88059387 -52257378 - MIR SINE MIR -1 261 36 1127 193 110 3 chr10 88059538 88059828 -52256937 - LTR50 LTR ERVL -2 793 473 1179 137 151 33 chr10 88059858 88060129 -52256636 - LTR50 LTR ERVL -475 320 18 185 278 0 83 chr10 88061207 88061279 -52255486 + MIR SINE MIR 31 96 -166 471 290 124 16 chr10 88061557 88061743 -52255022 + MIR SINE MIR 51 256 -6 189 0 0 0 chr10 88061996 88062017 -52254748 + (TG)n Simple_repeat Simple_repeat 1 21 0 557 313 32 29 chr10 88063169 88063415 -52253350 - MIR SINE MIR 0 262 16 361 321 60 6 chr10 88063748 88063916 -52252849 + HERVL LTR ERVL 5216 5392 -262 27 0 0 0 chr10 88064221 88064248 -52252517 + AT_rich Low_complexity Low_complexity 1 27 0 950 290 109 60 chr10 88064515 88065036 -52251729 + LTR67 LTR ERVL 2 548 -9 2406 70 0 10 chr10 88065036 88065334 -52251431 + AluY SINE Alu 1 295 -16 1004 88 0 20 chr10 88065477 88065625 -52251140 + L1PA4 LINE L1 6011 6155 0 228 186 0 139 chr10 88066844 88066899 -52249866 - L1M4 LINE L1 -343 5910 5870 2043 132 139 13 chr10 88066899 88067279 -52249486 - MSTA LTR MaLR 0 428 1 228 186 0 139 chr10 88067279 88067309 -52249456 - L1M4 LINE L1 -383 5870 5837 910 205 16 98 chr10 88067311 88067618 -52249147 - L1M4 LINE L1 -629 5604 5323 24 32 0 0 chr10 88067621 88067652 -52249113 + AT_rich Low_complexity Low_complexity 1 31 0 258 32 0 0 chr10 88067675 88067706 -52249059 + (TG)n Simple_repeat Simple_repeat 2 32 0 1904 230 58 95 chr10 88067777 88067935 -52248830 - L1M4 LINE L1 -978 5237 5075 1611 190 0 40 chr10 88067935 88068131 -52248634 - AluJb SINE Alu 0 312 132 2096 121 21 0 chr10 88068131 88068420 -52248345 + AluSg SINE Alu 1 295 -15 1611 190 0 40 chr10 88068420 88068544 -52248221 - AluJb SINE Alu -180 132 5 1904 230 58 95 chr10 88068544 88069516 -52247249 - L1M4 LINE L1 -1140 5075 4149 1165 143 5 16 chr10 88069517 88069706 -52247059 - AluSg/x SINE Alu -5 307 121 2776 263 73 42 chr10 88069708 88071015 -52245750 - L1M4 LINE L1 -2074 4141 2788 2495 85 0 0 chr10 88071015 88071320 -52245445 - AluSq SINE Alu -8 305 1 2776 263 73 42 chr10 88071320 88071363 -52245402 - L1M4 LINE L1 -3427 2788 2748 911 279 85 51 chr10 88072263 88072590 -52244175 - L1MEc LINE L1 -3453 2762 2448 2376 54 0 4 chr10 88072590 88072870 -52243895 - AluY SINE Alu -16 295 17 911 279 85 51 chr10 88072870 88072890 -52243875 - L1MEc LINE L1 -3767 2448 2430 2286 67 0 3 chr10 88072890 88073172 -52243593 - AluY SINE Alu -14 297 17 911 279 85 51 chr10 88073172 88073777 -52242988 - L1MEc LINE L1 -3785 2430 1793 291 54 0 0 chr10 88073777 88073814 -52242951 + (TG)n Simple_repeat Simple_repeat 2 38 0 911 279 85 51 chr10 88073814 88074040 -52242725 - L1MEc LINE L1 -4422 1793 1576 205 138 17 17 chr10 88074040 88074098 -52242667 + (TA)n Simple_repeat Simple_repeat 2 59 0 589 296 19 0 chr10 88074103 88074265 -52242500 - ERVL LTR ERVL -646 5118 4954 553 352 48 17 chr10 88074396 88074971 -52241794 - ERVL LTR ERVL -2919 2077 1528 1022 180 16 0 chr10 88074997 88075180 -52241585 + MER5A DNA MER1_type 4 189 0 2429 85 0 3 chr10 88075312 88075618 -52241147 - AluSq SINE Alu -8 305 1 5892 62 42 8 chr10 88076152 88076906 -52239859 - LTR17 LTR ERV1 0 780 1 3986 137 1 55 chr10 88076946 88077617 -52239148 + MER41B LTR ERV1 1 635 0 1588 207 127 24 chr10 88078101 88078559 -52238206 + MLT1D LTR MaLR 1 505 0 529 280 101 47 chr10 88078561 88078746 -52238019 + L1MC4a LINE L1 5293 5045 -1119 3639 152 86 27 chr10 88078746 88079071 -52237694 + LTR48 LTR ERV1 1 305 -482 2512 78 0 0 chr10 88079071 88079379 -52237386 - AluY SINE Alu -3 308 1 3639 152 86 27 chr10 88079379 88079796 -52236969 + LTR48 LTR ERV1 305 787 0 529 280 101 47 chr10 88079796 88080360 -52236405 + L1MC4a LINE L1 5044 5576 -588 1058 259 133 48 chr10 88080496 88080979 -52235786 + Tigger8 DNA MER2_type 112 635 -31 9156 115 109 29 chr10 88081950 88083531 -52233234 + pTR5 LTR ERV1 732 2438 0 671 207 35 0 chr10 88083599 88083744 -52233021 - L1MD3 LINE L1 -14 7981 7832 475 276 0 0 chr10 88083761 88083859 -52232906 - MER81 DNA DNA 0 114 17 999 189 0 0 chr10 88083883 88084047 -52232718 + AluSg/x SINE Alu 139 302 -10 329 164 33 0 chr10 88084056 88084117 -52232648 - MER81 DNA DNA -49 65 3 739 158 5 133 chr10 88084117 88084313 -52232452 - L1MD3 LINE L1 -176 7819 7649 2178 110 0 0 chr10 88084314 88084623 -52232142 - AluSx SINE Alu 0 312 4 625 172 8 8 chr10 88084659 88084781 -52231984 - L1MD3 LINE L1 -269 7726 7605 1283 83 35 0 chr10 88084907 88085076 -52231689 - AluSq SINE Alu -138 175 1 318 80 0 0 chr10 88085111 88085161 -52231604 + (TC)n Simple_repeat Simple_repeat 1 50 0 189 0 0 0 chr10 88085161 88085182 -52231583 + (TG)n Simple_repeat Simple_repeat 2 22 0 1378 90 53 0 chr10 88085660 88085849 -52230916 - AluSg/x SINE Alu -12 300 102 279 254 153 0 chr10 88086949 88087067 -52229698 - MER103 DNA DNA -8 158 23 2873 7 0 0 chr10 88088365 88088669 -52228096 + AluYb8 SINE Alu 1 304 -14 240 291 39 62 chr10 88089480 88089659 -52227106 + L2 LINE L2 2570 2744 -570 306 259 84 46 chr10 88089937 88090068 -52226697 + L2 LINE L2 3172 3307 -6 759 69 0 0 chr10 88090068 88090170 -52226595 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 298 352 33 22 chr10 88090324 88090506 -52226259 + LTR37B LTR ERV1 10 193 -275 2698 135 31 0 chr10 88090571 88090986 -52225779 - MSTA LTR MaLR 0 428 1 5362 162 67 31 chr10 88090986 88091112 -52225653 - MSTA-int LTR MaLR 0 1651 1531 2466 49 7 26 chr10 88091112 88091418 -52225347 + AluY SINE Alu 1 300 -11 5362 162 67 31 chr10 88091418 88092272 -52224493 - MSTA-int LTR MaLR -120 1531 635 204 210 48 16 chr10 88092346 88092408 -52224357 - L2 LINE L2 -251 3062 2999 676 240 10 5 chr10 88092575 88092767 -52223998 - LTR37B LTR ERV1 -45 423 231 3188 154 7 40 chr10 88092830 88093409 -52223356 - MSTA-int LTR MaLR -1091 560 1 2477 137 14 39 chr10 88093409 88093649 -52223116 - MSTA LTR MaLR 0 428 202 2423 94 0 3 chr10 88093649 88093948 -52222817 - AluSq SINE Alu -14 299 2 2477 137 14 39 chr10 88093948 88094146 -52222619 - MSTA LTR MaLR -226 202 1 684 176 53 37 chr10 88094146 88094333 -52222432 + LTR37B LTR ERV1 234 423 -45 204 210 48 16 chr10 88094500 88094562 -52222203 + L2 LINE L2 2999 3062 -251 261 167 0 0 chr10 88094564 88094618 -52222147 + (CA)n Simple_repeat Simple_repeat 2 55 0 1255 222 26 61 chr10 88094831 88095209 -52221556 - MLT1A1 LTR MaLR 0 365 1 4719 216 70 96 chr10 88095209 88096322 -52220443 - MLT1A1-int LTR MaLR 0 1735 694 289 27 27 0 chr10 88096322 88096359 -52220406 + MADE1 DNA Mariner 1 38 -42 4719 216 70 96 chr10 88096359 88097034 -52219731 - MLT1A1-int LTR MaLR -1041 694 3 799 241 42 38 chr10 88097089 88097326 -52219439 + MIR SINE MIR 2 239 -23 2268 86 0 0 chr10 88098022 88098302 -52218463 + AluSp SINE Alu 23 302 -11 205 290 95 18 chr10 88099931 88100100 -52216665 - MIR3 SINE MIR -7 201 20 2487 77 3 0 chr10 88100307 88100606 -52216159 + AluSp SINE Alu 1 300 -13 2156 121 0 7 chr10 88100635 88100933 -52215832 + AluSq SINE Alu 1 296 -17 1895 68 4 0 chr10 88100933 88101170 -52215595 - L1PA10 LINE L1 -18 6150 5913 797 240 36 5 chr10 88101203 88101399 -52215366 + Charlie1b DNA MER1_type 1 202 -321 998 188 107 7 chr10 88101467 88101775 -52214990 + Charlie1b DNA MER1_type 184 522 -1 207 361 44 22 chr10 88102328 88102511 -52214254 - L2 LINE L2 -190 3082 2896 367 289 13 34 chr10 88102538 88102687 -52214078 + (TATG)n Simple_repeat Simple_repeat 2 147 0 512 326 0 6 chr10 88102709 88102940 -52213825 + (TG)n Simple_repeat Simple_repeat 1 229 0 262 333 160 7 chr10 88103013 88103163 -52213602 - MIR SINE MIR -39 223 51 288 310 43 26 chr10 88103957 88104132 -52212633 - MIR SINE MIR -37 171 2 2427 87 3 3 chr10 88106977 88107288 -52209477 - AluY SINE Alu 0 311 1 4581 113 57 106 chr10 88107837 88108607 -52208158 + Tigger3b DNA MER2_type 293 1006 -2022 2534 188 35 63 chr10 88108607 88109177 -52207588 + MER41C LTR ERV1 1 554 0 4581 113 57 106 chr10 88109177 88109388 -52207377 + Tigger3b DNA MER2_type 1006 1226 -5 545 387 87 99 chr10 88110066 88110482 -52206283 + MLT1H LTR MaLR 119 529 -20 1069 269 179 50 chr10 88110556 88111243 -52205522 + Charlie7 DNA MER1_type 232 1007 -1605 2121 148 39 14 chr10 88111246 88111610 -52205155 + MSTC LTR MaLR 1 373 -55 959 118 0 0 chr10 88111610 88111754 -52205011 - L1PA16 LINE L1 -137 6029 5886 1220 258 155 59 chr10 88111754 88112642 -52204123 + Charlie7 DNA MER1_type 1047 2020 -592 10681 158 67 29 chr10 88112644 88114733 -52202032 + L1P LINE L1 639 2805 -3341 1350 86 0 0 chr10 88115096 88115270 -52201495 + MLT2A2 LTR ERVL 1 174 -279 310 290 0 32 chr10 88116321 88116445 -52200320 - L1ME LINE L1 -365 5756 5637 341 348 74 28 chr10 88116680 88117151 -52199614 - L1ME LINE L1 -757 5389 4897 2374 82 0 3 chr10 88117168 88117471 -52199294 - AluY SINE Alu -9 302 1 1540 218 103 10 chr10 88117471 88117870 -52198895 - L1MDa LINE L1 -6099 441 6 180 0 0 0 chr10 88119367 88119387 -52197378 + (GTGTG)n Simple_repeat Simple_repeat 1 20 0 2299 78 3 0 chr10 88119894 88120201 -52196564 - AluSq SINE Alu 0 308 1 2582 64 0 13 chr10 88120414 88120725 -52196040 - AluY SINE Alu -4 307 1 359 268 24 0 chr10 88125542 88125624 -52191141 - FRAM SINE Alu -12 154 71 4768 152 61 23 chr10 88125919 88126794 -52189971 + L1MA8 LINE L1 4958 5913 -378 2245 92 3 10 chr10 88126794 88127089 -52189676 + AluY SINE Alu 1 293 -18 4768 152 61 23 chr10 88127089 88127480 -52189285 + L1MA8 LINE L1 5913 6288 -3 374 143 0 0 chr10 88127600 88127665 -52189100 + AluJ/FLAM SINE Alu 1 58 -244 421 237 92 37 chr10 88127947 88128384 -52188381 - L1MEc LINE L1 -5839 557 38 599 146 10 0 chr10 88128390 88128486 -52188279 - AluSg/x SINE Alu -17 293 197 1148 52 0 8 chr10 88128655 88128789 -52187976 - AluSq/x SINE Alu -180 133 1 2416 80 3 0 chr10 88129259 88129561 -52187204 + AluSp SINE Alu 1 303 -10 1344 177 34 0 chr10 88129692 88129958 -52186807 + L1MA4 LINE L1 6023 6297 -3 276 339 8 48 chr10 88130006 88130305 -52186460 - L1M4 LINE L1 -2050 4096 3812 2462 67 0 3 chr10 88130305 88130603 -52186162 - AluY SINE Alu -14 297 1 276 339 8 48 chr10 88130603 88130657 -52186108 - L1M4 LINE L1 -2334 3812 3757 2235 82 0 51 chr10 88131002 88131317 -52185448 + AluY SINE Alu 1 299 -12 980 171 21 16 chr10 88132663 88132850 -52183915 - MLT1D LTR MaLR -4 501 314 584 267 84 18 chr10 88133390 88133615 -52183150 - MIR SINE MIR -8 254 15 297 365 60 6 chr10 88133683 88133850 -52182915 - MIR3 SINE MIR -28 180 5 2513 80 0 0 chr10 88133942 88134253 -52182512 + AluY SINE Alu 1 311 0 221 333 0 22 chr10 88134425 88134515 -52182250 + CT-rich Low_complexity Low_complexity 4 91 0 28 29 0 0 chr10 88134718 88134753 -52182012 + AT_rich Low_complexity Low_complexity 1 35 0 6791 204 27 46 chr10 88134766 88135574 -52181191 + L1ME LINE L1 3528 4350 -1796 1689 166 10 33 chr10 88135574 88135881 -52180884 - AluJo SINE Alu -12 300 1 6791 204 27 46 chr10 88135881 88136884 -52179881 + L1ME LINE L1 4350 5305 -841 230 214 0 0 chr10 88136887 88136929 -52179836 - MSTA LTR MaLR -2 426 385 * 2040 117 81 15 chr10 88136926 88137260 -52179505 + Tigger3(Golem) DNA MER2_type 2674 3029 0 228 174 29 14 chr10 88137260 88137329 -52179436 + (TATATG)n Simple_repeat Simple_repeat 1 70 0 277 294 0 12 chr10 88238025 88238110 -52078655 + L1ME LINE L1 5578 5661 -460 503 288 99 13 chr10 88238171 88238404 -52078361 + MIR SINE MIR 9 261 -1 22 0 0 0 chr10 88238714 88238736 -52078029 + AT_rich Low_complexity Low_complexity 1 22 0 5515 137 40 7 chr10 88238757 88239189 -52077576 - Tigger1 DNA MER2_type 0 2418 2002 2351 70 7 10 chr10 88239189 88239489 -52077276 - AluY SINE Alu -12 299 1 5515 137 40 7 chr10 88239489 88239942 -52076823 - Tigger1 DNA MER2_type -416 2002 1504 3117 147 32 11 chr10 88239946 88240469 -52076296 - Tigger1 DNA MER2_type -1881 537 4 904 159 6 35 chr10 88240827 88240997 -52075768 - L1MA10 LINE L1 -7 6327 6163 763 154 44 0 chr10 88241023 88241159 -52075606 + L1MB1 LINE L1 5991 6132 -36 302 214 247 39 chr10 88241423 88241577 -52075188 + MIR SINE MIR 64 249 -13 1862 124 53 0 chr10 88241584 88241749 -52075016 - AluSx SINE Alu -14 298 110 207 0 0 0 chr10 88241749 88241772 -52074993 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1862 124 53 0 chr10 88241772 88241889 -52074876 - AluSx SINE Alu -202 110 1 671 304 73 27 chr10 88242790 88243119 -52073646 - L2 LINE L2 0 3313 2970 723 318 19 37 chr10 88243122 88243446 -52073319 + L2 LINE L2 2501 2818 -496 671 267 107 24 chr10 88243747 88244083 -52072682 - MLT1J2 LTR MaLR -40 369 2 367 330 97 39 chr10 88244221 88244479 -52072286 - L2 LINE L2 -433 2881 2609 208 196 0 22 chr10 88244544 88244590 -52072175 + (TA)n Simple_repeat Simple_repeat 2 46 0 406 228 44 0 chr10 88244600 88244714 -52072051 + MER112 DNA MER1_type 141 259 -1 793 252 48 17 chr10 88244920 88245150 -52071615 + Charlie1 DNA MER1_type 3 239 -2522 392 229 202 0 chr10 88245147 88245256 -52071509 + Charlie1 DNA MER1_type 2631 2761 0 * 1020 350 46 24 chr10 88245503 88246086 -52070679 + L2 LINE L2 2110 2705 -609 509 354 31 4 chr10 88247109 88247338 -52069427 - MIR SINE MIR -25 237 3 906 210 28 0 chr10 88247909 88248090 -52068675 + MER5A DNA MER1_type 3 188 -1 878 263 137 24 chr10 88250795 88251302 -52065463 + MLT1G3 LTR MaLR 1 537 -5 3455 126 50 6 chr10 88251419 88251965 -52064800 + LTR24B LTR ERV1 1 570 -6 407 268 113 41 chr10 88252627 88252821 -52063944 - LTR50 LTR ERVL -586 209 2 565 306 87 9 chr10 88252887 88253116 -52063649 - MLT1K LTR MaLR -6 582 336 418 312 83 10 chr10 88255914 88256119 -52060646 + MIR SINE MIR 40 259 -3 319 333 39 32 chr10 88256310 88256466 -52060299 + MIR SINE MIR 73 229 -33 1864 231 143 21 chr10 88256847 88257405 -52059360 - MLT1E2 LTR MaLR 0 626 1 761 176 113 19 chr10 88258091 88258250 -52058515 - MER5B DNA MER1_type -4 174 1 287 261 15 0 chr10 88262656 88262721 -52054044 + (CTA)n Simple_repeat Simple_repeat 3 68 0 759 302 15 0 chr10 88262725 88262930 -52053835 - MIR SINE MIR -7 255 48 393 222 60 96 chr10 88263020 88263187 -52053578 + MLT1K LTR MaLR 411 571 -17 673 274 80 34 chr10 88263474 88263917 -52052848 - MLT1F LTR MaLR 0 590 7 225 238 83 12 chr10 88264729 88264813 -52051952 - L1 LINE L1 -872 5274 5185 221 340 7 21 chr10 88265336 88265477 -52051288 + CT-rich Low_complexity Low_complexity 3 141 0 385 257 0 0 chr10 88265802 88265872 -52050893 + MER21B LTR ERV1 19 88 -775 3864 207 23 21 chr10 88265877 88266675 -52050090 + MER21B LTR ERV1 44 842 -21 341 224 53 0 chr10 88266993 88267069 -52049696 - MIR SINE MIR -9 253 174 1994 112 31 21 chr10 88267090 88267377 -52049388 - AluSx SINE Alu -14 298 9 3433 173 45 5 chr10 88267821 88268418 -52048347 + LTR26E LTR ERV1 2 622 0 24 67 0 0 chr10 88268563 88268608 -52048157 + AT_rich Low_complexity Low_complexity 1 45 0 291 293 68 46 chr10 88268781 88269044 -52047721 + L1MC/D LINE L1 5255 5523 -2285 4151 163 36 49 chr10 88269206 88269977 -52046788 - L1MD1 LINE L1 0 6636 5876 2225 102 3 26 chr10 88269977 88270290 -52046475 - AluSp SINE Alu -6 307 2 4151 163 36 49 chr10 88270290 88270400 -52046365 - L1MD1 LINE L1 -760 5876 5766 7136 204 79 30 chr10 88270401 88272306 -52044459 - L1MD1 LINE L1 -4097 2443 446 966 185 0 0 chr10 88272304 88272461 -52044304 - L1MD1 LINE L1 -6296 244 88 * 520 300 96 52 chr10 88272619 88273065 -52043700 - L1 LINE L1 -1506 4640 4175 824 144 11 17 chr10 88275442 88275622 -52041143 + GA-rich Low_complexity Low_complexity 2 180 0 241 135 0 0 chr10 88275622 88275659 -52041106 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 302 281 12 0 chr10 88275969 88276051 -52040714 + MIR3 SINE MIR 120 202 -6 22 35 0 0 chr10 88276232 88276261 -52040504 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 88277975 88278000 -52038765 + AT_rich Low_complexity Low_complexity 1 25 0 954 125 23 23 chr10 88278000 88278176 -52038589 - L1MA8 LINE L1 -5 6286 6111 289 271 110 19 chr10 88278176 88278331 -52038434 - L1ME LINE L1 -455 5666 5498 654 314 105 36 chr10 88278464 88278960 -52037805 - L1MC/D LINE L1 -1986 5822 5293 35 83 0 0 chr10 88278960 88279044 -52037721 + AT_rich Low_complexity Low_complexity 1 84 0 25 0 0 0 chr10 88279190 88279215 -52037550 + AT_rich Low_complexity Low_complexity 1 25 0 306 322 155 28 chr10 88279592 88280051 -52036714 - L1MC/D LINE L1 -1575 4571 4055 230 301 6 62 chr10 88280076 88280252 -52036513 - L1MC/D LINE L1 -2127 4019 3854 39007 69 2 3 chr10 88280275 88286424 -52030341 + L1PA5 LINE L1 11 6153 -1 338 202 61 0 chr10 88287340 88287439 -52029326 + MLT1I LTR MaLR 267 371 -38 1379 87 69 13 chr10 88287444 88287675 -52029090 - L1MA3 LINE L1 0 6305 6062 3723 89 35 18 chr10 88287682 88288037 -52028728 - L1PB2 LINE L1 -2 6149 5779 261 0 0 0 chr10 88288037 88288066 -52028699 + (TA)n Simple_repeat Simple_repeat 1 29 0 3723 89 35 18 chr10 88288066 88288274 -52028491 - L1PB2 LINE L1 -372 5779 5576 6009 205 9 4 chr10 88288274 88289676 -52027089 + L1 LINE L1 3759 5168 -978 30 0 0 0 chr10 88290039 88290069 -52026696 + AT_rich Low_complexity Low_complexity 1 30 0 278 348 92 35 chr10 88290151 88290292 -52026473 - MER5A DNA MER1_type -4 185 37 230 288 117 81 chr10 88290486 88290510 -52026255 + L2 LINE L2 3199 3221 -92 1916 147 10 16 chr10 88290510 88290817 -52025948 - AluSx SINE Alu -7 305 1 230 288 117 81 chr10 88290817 88290903 -52025862 + L2 LINE L2 3221 3313 0 1346 181 34 90 chr10 88291026 88291413 -52025352 + MLT1A1 LTR MaLR 1 365 0 1496 168 89 41 chr10 88291803 88292095 -52024670 + AluJb SINE Alu 3 308 -4 25 65 0 0 chr10 88292527 88292573 -52024192 + AT_rich Low_complexity Low_complexity 1 46 0 1925 129 0 0 chr10 88292651 88292922 -52023843 - AluSq SINE Alu -23 290 20 233 250 10 42 chr10 88293204 88293300 -52023465 - MLT1I LTR MaLR -235 174 82 2233 203 32 20 chr10 88293855 88294352 -52022413 + MLT1D LTR MaLR 3 505 0 2128 119 0 28 chr10 88294497 88294815 -52021950 + AluSc SINE Alu 1 309 0 425 141 51 0 chr10 88294892 88294970 -52021795 + MLT1C LTR MaLR 1 82 -385 1991 163 37 29 chr10 88294970 88295517 -52021248 - MLT2A2 LTR ERVL 0 554 3 1432 194 100 17 chr10 88295519 88295879 -52020886 + MLT1C LTR MaLR 78 467 0 368 123 43 21 chr10 88296904 88297041 -52019724 + CT-rich Low_complexity Low_complexity 1 139 0 615 228 96 0 chr10 88297043 88297179 -52019586 - FAM SINE Alu -36 149 1 560 270 13 6 chr10 88297457 88297616 -52019149 - MIR SINE MIR -3 259 100 2300 118 0 3 chr10 88297899 88298212 -52018553 - AluSq SINE Alu -1 312 1 24 32 0 0 chr10 88298261 88298292 -52018473 + AT_rich Low_complexity Low_complexity 1 31 0 445 358 0 0 chr10 88298332 88298455 -52018310 - L2 LINE L2 0 3272 3150 864 281 77 0 chr10 88299260 88299545 -52017220 - LTR16C LTR ERVL -24 467 161 312 91 0 0 chr10 88299939 88299983 -52016782 + (GA)n Simple_repeat Simple_repeat 2 45 0 367 290 60 16 chr10 88299995 88300178 -52016587 + Charlie8 DNA MER1_type 75 265 -2152 813 314 161 17 chr10 88300652 88301418 -52015347 + L2 LINE L2 2421 3313 0 351 318 34 36 chr10 88301885 88302251 -52014514 - MLT1H1 LTR MaLR -4 551 182 2157 165 21 21 chr10 88303382 88303801 -52012964 - MSTB LTR MaLR -7 419 1 281 244 128 0 chr10 88304019 88304097 -52012668 - L2 LINE L2 -31 3241 3154 374 299 22 22 chr10 88304564 88304698 -52012067 - MIR SINE MIR -34 228 95 197 313 0 12 chr10 88305261 88305341 -52011424 + L2 LINE L2 3163 3241 -72 24 53 0 0 chr10 88306120 88306158 -52010607 + AT_rich Low_complexity Low_complexity 1 38 0 410 287 84 6 chr10 88306232 88306399 -52010366 + MIR SINE MIR 75 254 -8 439 346 75 9 chr10 88307208 88307422 -52009343 + MIR SINE MIR 2 229 -33 230 71 0 24 chr10 88308207 88308249 -52008516 + (CA)n Simple_repeat Simple_repeat 1 41 0 260 276 24 31 chr10 88308835 88308962 -52007803 - MER103 DNA DNA -2 164 39 307 219 0 0 chr10 88309020 88309084 -52007681 - MLT1G1 LTR MaLR -2 593 530 414 308 54 44 chr10 88309153 88309468 -52007297 - MLT1H LTR MaLR -230 319 2 457 329 21 0 chr10 88309510 88309650 -52007115 - MIR3 SINE MIR -48 160 18 1738 236 143 0 chr10 88312334 88312788 -52003977 + L1MDa LINE L1 17 535 -6005 932 261 61 0 chr10 88312797 88313157 -52003608 + L1MDa LINE L1 2951 3332 -3208 1960 249 65 9 chr10 88313175 88313913 -52002852 + L1MDa LINE L1 4004 4782 -1758 1730 228 56 32 chr10 88313928 88314872 -52001893 + L1MDa LINE L1 5182 6153 -483 2262 139 5 32 chr10 88315424 88315798 -52000967 - THE1B LTR MaLR 0 364 1 219 36 0 0 chr10 88316431 88316459 -52000306 + (CA)n Simple_repeat Simple_repeat 1 28 0 202 189 21 32 chr10 88316561 88316656 -52000109 + (TA)n Simple_repeat Simple_repeat 2 95 0 280 254 49 78 chr10 88316782 88316924 -51999841 - MIR SINE MIR -94 168 31 257 189 38 0 chr10 88316956 88317009 -51999756 + L2 LINE L2 3259 3313 0 2308 114 0 0 chr10 88317693 88318001 -51998764 - AluSg SINE Alu -2 308 1 27 81 0 0 chr10 88318589 88318651 -51998114 + AT_rich Low_complexity Low_complexity 1 62 0 245 29 29 0 chr10 88321423 88321457 -51995308 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2176 104 3 31 chr10 88321496 88321813 -51994952 - AluSg SINE Alu -2 308 1 1920 116 6 69 chr10 88322671 88322989 -51993776 + AluSc SINE Alu 5 302 -7 618 238 92 107 chr10 88323447 88323510 -51993255 + MLT1B LTR MaLR 114 176 -214 1398 116 31 9 chr10 88323510 88323735 -51993030 + L1PA13 LINE L1 5934 6163 0 618 238 92 107 chr10 88323735 88323952 -51992813 + MLT1B LTR MaLR 176 390 0 365 301 113 74 chr10 88324897 88325329 -51991436 + L2 LINE L2 2339 2787 -527 4520 195 38 10 chr10 88325345 88326626 -51990139 - L1MA7 LINE L1 0 6291 4982 2510 45 0 13 chr10 88326769 88327077 -51989688 - AluY SINE Alu 0 311 8 449 316 72 29 chr10 88328115 88328561 -51988204 + HAL1b LINE L1 627 1091 -257 31 26 0 0 chr10 88328885 88328923 -51987842 + AT_rich Low_complexity Low_complexity 1 38 0 1943 114 62 0 chr10 88328931 88329203 -51987562 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr10 88329206 88329228 -51987537 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 21 57 0 0 chr10 88329320 88329355 -51987410 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 88329392 88329414 -51987351 + AT_rich Low_complexity Low_complexity 1 22 0 264 30 0 0 chr10 88330009 88330042 -51986723 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 369 0 0 0 chr10 88330783 88330824 -51985941 + (CA)n Simple_repeat Simple_repeat 2 42 0 426 333 77 11 chr10 88330884 88331067 -51985698 - MIR SINE MIR -48 214 20 563 298 57 61 chr10 88332689 88333100 -51983665 + LTR35 LTR ERV1 144 547 -9 1375 274 41 16 chr10 88333115 88333480 -51983285 + LOR1-int LTR ERV1 5 378 -1408 6525 162 19 36 chr10 88333610 88334932 -51981833 + LTR57-int LTR ERVL 296 1594 -3749 5798 176 59 79 chr10 88334003 88336361 -51980404 + LOR1-int LTR ERV1 694 2807 -2129 * 367 126 11 126 chr10 88336496 88336591 -51980174 + LOR1-int LTR ERV1 3786 3869 -4251 279 211 0 0 chr10 88336885 88336937 -51979828 + LOR1-int LTR ERV1 3950 4001 -4119 * 357 197 92 0 chr10 88336919 88336995 -51979770 + MER49-int LTR ERV1 6054 6136 -622 1179 211 38 11 chr10 88336996 88337269 -51979496 + MER49-int LTR ERV1 6445 7064 -32 4408 125 23 0 chr10 88337295 88338024 -51978741 + L1PA16 LINE L1 5204 5945 -221 2928 101 34 20 chr10 88338024 88338462 -51978303 + MLT2A1 LTR ERVL 1 444 0 41858 87 18 8 chr10 88338462 88344057 -51972708 + HERVL-A1-A1 LTR ERVL 1 5654 0 2930 72 41 3 chr10 88344057 88344446 -51972319 + MLT2A1 LTR ERVL 1 404 -40 226 218 26 13 chr10 88344446 88344524 -51972241 + (TA)n Simple_repeat Simple_repeat 1 79 0 343 85 0 0 chr10 88344524 88344571 -51972194 + MLT2A1 LTR ERVL 390 436 -8 1425 135 13 4 chr10 88344571 88344800 -51971965 + L1PA16 LINE L1 5934 6164 -2 4392 150 21 20 chr10 88344800 88345546 -51971219 + MER49 LTR ERV1 14 760 -163 363 228 26 18 chr10 88346000 88346114 -51970651 + LOR1-int LTR ERV1 7358 7472 -648 270 0 0 0 chr10 88346114 88346144 -51970621 + (CA)n Simple_repeat Simple_repeat 2 31 0 812 278 33 49 chr10 88346370 88346805 -51969960 + LTR35 LTR ERV1 144 556 0 1117 161 28 76 chr10 88347179 88347428 -51969337 - MSTB LTR MaLR -2 424 188 680 188 15 13 chr10 88347440 88347471 -51969294 - L1P LINE L1 -1221 4925 4896 3768 111 17 7 chr10 88347471 88348046 -51968719 - L1PA15 LINE L1 0 6165 5585 680 188 15 13 chr10 88348046 88348208 -51968557 - L1P LINE L1 -1250 4896 4730 1332 165 0 0 chr10 88348209 88348415 -51968350 - MSTB LTR MaLR -219 207 2 2329 88 0 16 chr10 88348477 88348785 -51967980 + AluY SINE Alu 1 303 -8 864 292 46 51 chr10 88348798 88349401 -51967364 - L1ME3A LINE L1 -224 5946 5347 1235 177 4 40 chr10 88349634 88349911 -51966854 + L1MB3 LINE L1 5915 6181 -2 810 184 21 32 chr10 88349939 88350129 -51966636 + L1MC3 LINE L1 7444 7631 -154 237 170 64 0 chr10 88352370 88352417 -51964348 + (ATATG)n Simple_repeat Simple_repeat 5 54 0 1990 169 22 8 chr10 88352649 88353004 -51963761 - MLT1A1 LTR MaLR 0 365 6 218 330 11 11 chr10 88355343 88355431 -51961334 + MIR SINE MIR 164 251 -11 1123 306 117 13 chr10 88356942 88357573 -51959192 + Charlie7 DNA MER1_type 1 697 -1915 226 65 0 0 chr10 88358493 88358524 -51958241 + L1MA9 LINE L1 6279 6309 -3 6230 93 17 1 chr10 88359066 88360368 -51956397 + L1PA14 LINE L1 4842 6158 -3 1994 182 38 19 chr10 88360764 88361182 -51955583 - MSTB LTR MaLR 0 426 1 4781 169 23 8 chr10 88361182 88362007 -51954758 - MSTB-int LTR MaLR 0 1651 815 425 223 143 0 chr10 88362999 88363111 -51953654 + L2 LINE L2 3185 3312 -1 6383 129 19 27 chr10 88363822 88364902 -51951863 + MER11C LTR ERVK 1 1071 0 1234 231 155 31 chr10 88365776 88365815 -51950950 - MLT2B2 LTR ERVL 0 515 482 360 0 0 0 chr10 88365815 88365855 -51950910 + (TG)n Simple_repeat Simple_repeat 2 41 0 1234 231 155 31 chr10 88365855 88366273 -51950492 - MLT2B2 LTR ERVL -33 482 1 833 281 88 49 chr10 88368034 88368560 -51948205 + L1ME3 LINE L1 5290 5835 -327 477 155 108 1 chr10 88368872 88368982 -51947783 - L1MA8 LINE L1 -2 6289 6174 189 171 0 0 chr10 88370566 88370601 -51946164 + (CTATT)n Simple_repeat Simple_repeat 1 35 0 588 290 171 27 chr10 88370928 88371331 -51945434 + LTR33A LTR ERVL 61 521 -2 237 139 0 0 chr10 88371567 88371610 -51945155 + (GA)n Simple_repeat Simple_repeat 1 43 0 316 278 169 36 chr10 88371798 88372232 -51944533 + L1MDa LINE L1 1107 1617 -5017 235 282 28 14 chr10 88372245 88372387 -51944378 + L1MDa LINE L1 1540 1683 -4859 6359 239 55 32 chr10 88372726 88374132 -51942633 + L1MA10 LINE L1 1090 2463 -3865 772 108 85 15 chr10 88374132 88374262 -51942503 - MER85 DNA T2_type 0 139 1 6359 239 55 32 chr10 88374262 88376128 -51940637 + L1MA10 LINE L1 2463 4408 -1920 9795 160 23 11 chr10 88376133 88377840 -51938925 + Tigger1 DNA MER2_type 1 1728 -690 850 79 0 0 chr10 88377840 88377954 -51938811 - L1PA6 LINE L1 -243 5911 5798 587 183 0 0 chr10 88377958 88378062 -51938703 + Tigger1 DNA MER2_type 1728 1831 -587 518 231 163 20 chr10 88378062 88378209 -51938556 - FRAM SINE Alu -1 175 8 2994 186 27 7 chr10 88378254 88378841 -51937924 + Tigger1 DNA MER2_type 1818 2416 -2 4387 216 27 28 chr10 88378842 88380936 -51935829 + L1MA10 LINE L1 4411 6509 -7 321 311 94 20 chr10 88380963 88381207 -51935558 + L1ME3 LINE L1 4085 4346 -1800 1348 262 93 25 chr10 88381307 88382112 -51934653 + L1ME3 LINE L1 4385 5244 -902 285 89 0 0 chr10 88382128 88382173 -51934592 + (TA)n Simple_repeat Simple_repeat 1 45 0 216 213 71 0 chr10 88382185 88382312 -51934453 + (TA)n Simple_repeat Simple_repeat 1 136 0 348 268 3 12 chr10 88382326 88382460 -51934305 + L1ME3 LINE L1 5340 5472 -770 9251 39 15 0 chr10 88382505 88383672 -51933093 - L1PA3 LINE L1 -2172 3974 2791 11879 28 1 0 chr10 88383672 88385849 -51930916 + L1PA3 LINE L1 3979 6155 0 28 0 0 0 chr10 88385901 88385929 -51930836 + AT_rich Low_complexity Low_complexity 1 28 0 748 256 16 58 chr10 88386101 88386408 -51930357 + L1ME3 LINE L1 5493 5790 -331 285 227 32 32 chr10 88386531 88386685 -51930080 + (CATATA)n Simple_repeat Simple_repeat 2 155 0 323 217 78 54 chr10 88386695 88386824 -51929941 + L1ME3 LINE L1 5908 6039 -123 1216 216 93 29 chr10 88386841 88387151 -51929614 - MER58B DNA MER1_type -1 340 11 5811 211 32 9 chr10 88387258 88388402 -51928363 + L1MC3 LINE L1 5029 5014 -1132 2039 149 3 0 chr10 88388402 88388704 -51928061 - AluSx SINE Alu -9 303 1 5811 211 32 9 chr10 88388704 88389105 -51927660 + L1MC3 LINE L1 5013 5403 -743 1015 211 64 48 chr10 88389107 88389419 -51927346 - MER2 DNA MER2_type -28 317 1 1699 180 18 60 chr10 88389419 88389802 -51926963 + L1MC3 LINE L1 6644 7010 -775 1860 187 3 3 chr10 88389828 88390160 -51926605 + MER7A DNA MER2_type 1 330 -16 2287 182 48 15 chr10 88390161 88390701 -51926064 + L1MC3 LINE L1 7100 7761 -24 1783 157 0 42 chr10 88391027 88391340 -51925425 - AluJb SINE Alu -12 300 1 23 0 0 0 chr10 88393320 88393343 -51923422 + AT_rich Low_complexity Low_complexity 1 23 0 318 323 97 4 chr10 88393795 88394052 -51922713 - L1ME LINE L1 -295 5826 5546 448 339 152 31 chr10 88394371 88394819 -51921946 - L2 LINE L2 -4 3309 2808 5168 248 45 32 chr10 88394856 88396443 -51920322 + L1M4 LINE L1 11 1618 -4924 2612 103 37 28 chr10 88396454 88396934 -51919831 - MLT2A1 LTR ERVL 0 453 1 975 243 34 50 chr10 88396934 88397312 -51919453 + L1M4 LINE L1 1624 1995 -4651 775 269 32 53 chr10 88397355 88398144 -51918621 + L1M4 LINE L1 2211 2992 -3652 21 57 0 0 chr10 88398207 88398242 -51918523 + AT_rich Low_complexity Low_complexity 1 35 0 3700 213 32 33 chr10 88398242 88399109 -51917656 - L1MB1 LINE L1 -32 6157 5289 189 0 0 0 chr10 88399109 88399130 -51917635 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 3700 213 32 33 chr10 88399130 88399884 -51916881 - L1MB1 LINE L1 -900 5289 4536 243 250 0 0 chr10 88399890 88399942 -51916823 + MLT1H LTR MaLR 492 543 -6 4493 183 36 19 chr10 88401415 88403216 -51913549 - L1MA7 LINE L1 -1 6290 4459 3283 191 44 44 chr10 88403182 88403303 -51913462 + L1 LINE L1 3582 3702 -2444 * 2276 101 0 0 chr10 88403303 88403599 -51913166 + AluSq SINE Alu 1 296 -17 3283 191 44 44 chr10 88403599 88404339 -51912426 + L1 LINE L1 3701 4443 -1703 2761 7 0 0 chr10 88405284 88405581 -51911184 - AluY SINE Alu -2 309 13 808 257 110 66 chr10 88405914 88406413 -51910352 - MLT1H1 LTR MaLR 0 555 96 372 143 130 0 chr10 88406490 88406567 -51910198 - MLT1H1 LTR MaLR -508 87 1 700 79 0 44 chr10 88406922 88407036 -51909729 + L1PA13 LINE L1 6055 6163 0 25 31 0 0 chr10 88407053 88407085 -51909680 + AT_rich Low_complexity Low_complexity 1 32 0 238 234 47 0 chr10 88407499 88407563 -51909202 - MIR SINE MIR -70 192 126 271 335 131 27 chr10 88408570 88408791 -51907974 - L2 LINE L2 -374 2940 2697 303 309 0 0 chr10 88409689 88409770 -51906995 + CT-rich Low_complexity Low_complexity 3 83 0 1779 78 4 4 chr10 88409826 88410070 -51906695 + L1PA7 LINE L1 5911 6154 0 304 396 50 9 chr10 88411377 88411698 -51905067 - MER102b DNA MER1_type -4 337 4 244 236 18 0 chr10 88412711 88412766 -51903999 + (CA)n Simple_repeat Simple_repeat 2 57 0 425 337 12 6 chr10 88413415 88413581 -51903184 - MLT1I LTR MaLR -15 394 228 911 88 0 0 chr10 88413632 88413792 -51902973 - AluY SINE Alu 0 336 177 843 273 158 5 chr10 88413796 88414177 -51902588 - L2 LINE L2 -914 2400 1962 193 368 105 53 chr10 88416016 88416149 -51900616 + L2 LINE L2 3072 3211 -61 306 314 94 28 chr10 88416952 88417377 -51899388 - L1MC/D LINE L1 -460 5661 5346 195 442 0 0 chr10 88417500 88417595 -51899170 + L2 LINE L2 3210 3304 -9 592 345 55 13 chr10 88421810 88422045 -51894720 + MIR SINE MIR 2 246 -16 458 333 102 27 chr10 88422070 88422511 -51894254 + L2 LINE L2 2185 2658 -656 2202 121 0 0 chr10 88422573 88422879 -51893886 + AluSq SINE Alu 1 306 -7 41 21 0 0 chr10 88424250 88424298 -51892467 + AT_rich Low_complexity Low_complexity 1 48 0 1173 231 58 62 chr10 88424798 88425262 -51891503 - L1ME1 LINE L1 -50 6116 5655 1703 113 4 0 chr10 88425262 88425492 -51891273 - AluSc SINE Alu -76 233 3 619 202 82 144 chr10 88425494 88425583 -51891182 - L1ME1 LINE L1 -975 5171 5078 2075 174 29 74 chr10 88425583 88426070 -51890695 - MLT1C LTR MaLR -2 465 1 619 202 82 144 chr10 88426070 88426431 -51890334 - L1ME1 LINE L1 -1068 5078 4749 753 313 89 47 chr10 88426460 88426988 -51889777 - L1MEd LINE L1 -4972 1147 598 24 0 0 0 chr10 88427405 88427429 -51889336 + AT_rich Low_complexity Low_complexity 1 24 0 472 200 110 10 chr10 88427879 88427979 -51888786 + FLAM_C SINE Alu 3 112 -31 1546 228 38 24 chr10 88428059 88428510 -51888255 - MER39 LTR ERV1 -1 706 250 364 241 83 83 chr10 88428477 88428566 -51888199 - MER39 LTR ERV1 -574 133 42 * 1656 136 0 0 chr10 88428566 88428802 -51887963 - AluSg/x SINE Alu -5 307 72 364 241 83 83 chr10 88428802 88428845 -51887920 - MER39 LTR ERV1 -664 43 1 595 272 74 37 chr10 88430209 88430452 -51886313 + MIR SINE MIR 1 252 -10 1478 202 9 47 chr10 88430493 88430810 -51885955 + AluJb SINE Alu 1 305 -7 474 306 66 22 chr10 88430903 88431086 -51885679 - MIR SINE MIR -65 197 7 200 69 0 0 chr10 88431113 88431142 -51885623 + L2 LINE L2 3285 3313 0 216 314 78 0 chr10 88431593 88431695 -51885070 + MIR SINE MIR 101 210 -52 22 0 0 0 chr10 88431798 88431820 -51884945 + AT_rich Low_complexity Low_complexity 1 22 0 848 173 89 65 chr10 88432372 88432586 -51884179 - MER20 DNA MER1_type 0 219 1 314 330 116 0 chr10 88433782 88433894 -51882871 + MIR SINE MIR 21 145 -117 40909 53 4 2 chr10 88434061 88440193 -51876572 + L1PA3 LINE L1 9 6153 -2 1203 179 35 72 chr10 88440264 88440611 -51876154 + L1MA8 LINE L1 5948 6281 -10 267 271 172 25 chr10 88441596 88441718 -51875047 - MIR SINE MIR -21 241 102 202 78 98 0 chr10 88442864 88442915 -51873850 + (TA)n Simple_repeat Simple_repeat 1 56 0 1399 213 33 12 chr10 88443256 88443590 -51873175 + MLT2D LTR ERVL 5 345 -69 248 246 15 0 chr10 88443776 88443841 -51872924 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 516 319 52 5 chr10 88445098 88445289 -51871476 + MIR SINE MIR 20 219 -43 1114 221 77 20 chr10 88446211 88446564 -51870201 - L1ME3 LINE L1 0 6162 5790 238 217 48 0 chr10 88448354 88448437 -51868328 + (TA)n Simple_repeat Simple_repeat 1 87 0 1867 114 62 0 chr10 88448533 88448805 -51867960 + AluSq SINE Alu 1 289 -24 1780 51 0 9 chr10 88449233 88449449 -51867316 + AluY SINE Alu 88 301 -10 5014 130 251 61 chr10 88449528 88450963 -51865802 + pTR5 LTR ERV1 375 2438 0 21 0 0 0 chr10 88451435 88451456 -51865309 + AT_rich Low_complexity Low_complexity 1 21 0 463 333 79 9 chr10 88451770 88451998 -51864767 - MLT1J2 LTR MaLR 0 450 207 1549 193 112 12 chr10 88452204 88452535 -51864230 + MLT1A1 LTR MaLR 2 365 0 2462 84 48 25 chr10 88452540 88452895 -51863870 + THE1B LTR MaLR 1 363 -1 659 268 17 47 chr10 88453874 88454109 -51862656 - MIR SINE MIR -14 248 21 1650 140 63 22 chr10 88454809 88455080 -51861685 + AluJo SINE Alu 1 282 -30 22 35 0 0 chr10 88455104 88455133 -51861632 + AT_rich Low_complexity Low_complexity 1 29 0 5139 182 53 48 chr10 88455695 88456293 -51860472 + LTR56-int LTR ERV1 4410 5003 -120 9103 108 13 0 chr10 88456293 88457563 -51859202 + HSMAR1 DNA Mariner 1 1286 -1 5139 182 53 48 chr10 88457563 88458310 -51858455 + LTR56-int LTR ERV1 5003 4355 -768 2364 93 0 0 chr10 88458310 88458612 -51858153 + AluSg SINE Alu 1 302 -8 5139 182 53 48 chr10 88458612 88459227 -51857538 + LTR56-int LTR ERV1 4354 4964 -159 577 102 10 41 chr10 88459386 88459484 -51857281 - AluY SINE Alu -8 303 209 1101 208 48 37 chr10 88459485 88459810 -51856955 + LTR56 LTR ERV1 11 309 -128 2179 120 13 0 chr10 88459810 88460111 -51856654 + AluSc SINE Alu 1 305 -4 1101 208 48 37 chr10 88460111 88460242 -51856523 + LTR56 LTR ERV1 309 437 0 21 71 0 0 chr10 88460319 88460361 -51856404 + AT_rich Low_complexity Low_complexity 1 42 0 208 184 0 20 chr10 88460518 88460567 -51856198 + T-rich Low_complexity Low_complexity 3 50 0 30 0 0 0 chr10 88461248 88461278 -51855487 + AT_rich Low_complexity Low_complexity 1 30 0 2385 72 0 3 chr10 88463387 88463679 -51853086 - AluY SINE Alu -20 291 1 212 184 0 0 chr10 88465422 88465460 -51851305 + T-rich Low_complexity Low_complexity 1 38 0 2061 146 12 12 chr10 88465478 88465821 -51850944 - MER2 DNA MER2_type -1 343 1 2554 11 3 0 chr10 88466270 88466586 -51850179 - AluYb8 SINE Alu 0 317 1 621 285 102 25 chr10 88467172 88467576 -51849189 + L1M4 LINE L1 3725 4159 -1987 2225 99 0 0 chr10 88467813 88468119 -51848646 + AluY SINE Alu 1 306 0 913 287 62 45 chr10 88468548 88469520 -51847245 - L1ME LINE L1 -4838 1140 316 377 276 29 105 chr10 88469586 88469796 -51846969 - L1ME LINE L1 -5867 203 10 1309 155 11 72 chr10 88471738 88471946 -51844819 + L1PA16 LINE L1 5907 6095 -71 1551 210 0 27 chr10 88471946 88472241 -51844524 - AluJo SINE Alu -23 289 3 1309 155 11 72 chr10 88472241 88472309 -51844456 + L1PA16 LINE L1 6095 6166 0 401 307 15 36 chr10 88473063 88473200 -51843565 + MIR3 SINE MIR 14 147 -61 272 48 24 0 chr10 88473561 88473603 -51843162 + (TG)n Simple_repeat Simple_repeat 2 44 0 2854 129 2 16 chr10 88474324 88474757 -51842008 + MSTA LTR MaLR 1 427 -1 1633 212 210 21 chr10 88475163 88475815 -51840950 + LTR50 LTR ERVL 18 792 -3 481 260 0 0 chr10 88476125 88476221 -51840544 + MER5A DNA MER1_type 9 104 -85 2282 100 3 10 chr10 88476555 88476866 -51839899 + AluSc SINE Alu 1 309 0 326 213 100 60 chr10 88477577 88477727 -51839038 + HAL1 LINE L1 938 1093 -1414 206 189 0 19 chr10 88477909 88477962 -51838803 + GA-rich Low_complexity Low_complexity 4 55 0 2348 105 3 0 chr10 88478301 88478605 -51838160 + AluSp SINE Alu 1 305 -8 217 225 0 50 chr10 88479181 88479261 -51837504 + T-rich Low_complexity Low_complexity 2 77 0 416 296 154 0 chr10 88479324 88479493 -51837272 + MIR SINE MIR 62 256 -6 2734 146 26 2 chr10 88479672 88480090 -51836675 + MSTA LTR MaLR 1 428 0 207 250 125 85 chr10 88480717 88480941 -51835824 - L2 LINE L2 0 3313 3081 826 170 59 0 chr10 88482757 88482910 -51833855 + FRAM SINE Alu 6 167 -9 4508 90 0 0 chr10 88483811 88484365 -51832400 - MER41A LTR ERV1 0 554 1 12110 89 24 3 chr10 88484365 88485988 -51830777 - MER41A-int LTR ERV1 -2 5944 4288 312 316 35 0 chr10 88486105 88486219 -51830546 - MIR SINE MIR -85 177 60 987 224 169 69 chr10 88487935 88488439 -51828326 + LTR1B LTR ERV1 38 591 -235 322 297 77 19 chr10 88490182 88490337 -51826428 + MIR SINE MIR 48 211 -51 1597 196 14 7 chr10 88490976 88491272 -51825493 + AluJb SINE Alu 3 300 -12 404 304 146 16 chr10 88491352 88491605 -51825160 + MER34B LTR ERV1 5 290 -275 1502 131 14 5 chr10 88491676 88491898 -51824867 + MER30 DNA MER1_type 2 225 -5 1347 230 37 50 chr10 88492014 88492470 -51824295 + LTR49-int LTR ERV1 1372 1821 -4510 * 4127 178 14 96 chr10 88492461 88493475 -51823290 + LTR49-int LTR ERV1 2558 3654 -1469 1960 148 20 0 chr10 88493475 88493780 -51822985 + AluSq SINE Alu 1 311 -2 4127 178 14 96 chr10 88493780 88493872 -51822893 + LTR49-int LTR ERV1 3654 2567 -2556 2034 141 7 0 chr10 88493872 88494163 -51822602 + AluSg SINE Alu 1 293 -17 4127 178 14 96 chr10 88494163 88494371 -51822394 + LTR49-int LTR ERV1 2566 2790 -2333 247 245 198 9 chr10 88494523 88494629 -51822136 - MIR SINE MIR -32 230 105 305 298 98 6 chr10 88494932 88495084 -51821681 + MIR SINE MIR 28 188 -64 192 263 35 35 chr10 88497277 88497334 -51819431 - L3 LINE CR1 -234 1343 1287 236 394 15 0 chr10 88497464 88497601 -51819164 - L3 LINE CR1 -419 1158 1020 501 229 19 6 chr10 88497924 88498081 -51818684 + GA-rich Low_complexity Low_complexity 2 160 0 227 279 29 0 chr10 88499308 88499376 -51817389 + GA-rich Low_complexity Low_complexity 3 72 0 1272 271 79 14 chr10 88499619 88500051 -51816714 + MLT2E LTR ERVL 167 626 -2 2294 113 0 0 chr10 88500140 88500450 -51816315 - AluSg SINE Alu 0 310 1 1902 249 56 41 chr10 88500480 88501091 -51815674 - MER74B LTR ERVL 0 622 3 1826 164 0 0 chr10 88501175 88501516 -51815249 + AluJb SINE Alu 1 341 0 768 273 171 40 chr10 88501923 88502374 -51814391 + MLT1G1 LTR MaLR 14 523 -44 441 202 54 39 chr10 88503165 88503294 -51813471 + MER53 DNA DNA 2 132 -57 269 356 86 6 chr10 88503524 88503698 -51813067 - MIR SINE MIR -56 206 19 441 149 14 0 chr10 88504471 88504545 -51812220 - MLT1A1 LTR MaLR 0 365 291 1382 208 30 0 chr10 88504619 88504884 -51811881 - MLT1A1 LTR MaLR 0 365 93 1326 192 20 99 chr10 88504908 88505262 -51811503 - MLT1A1 LTR MaLR -38 327 2 461 208 0 10 chr10 88505262 88505357 -51811408 - MLT1A1 LTR MaLR -271 94 1 217 374 6 18 chr10 88506094 88506257 -51810508 - MIR SINE MIR -79 183 23 1768 189 3 0 chr10 88506905 88507196 -51809569 + AluJo SINE Alu 1 292 -20 377 330 82 16 chr10 88507282 88507476 -51809289 + MIR SINE MIR 5 211 -51 577 288 65 16 chr10 88508211 88508393 -51808372 + MIR SINE MIR 30 214 -48 202 222 0 0 chr10 88508405 88508450 -51808315 + (CAT)n Simple_repeat Simple_repeat 3 47 0 253 233 70 35 chr10 88508554 88508640 -51808125 + MER103 DNA DNA 33 121 -45 352 317 173 14 chr10 88508656 88508864 -51807901 + MIR SINE MIR 8 248 -14 384 208 0 0 chr10 88510112 88510189 -51806576 + MIR SINE MIR 64 140 -122 310 306 226 0 chr10 88510380 88510504 -51806261 + L2 LINE L2 3118 3269 -3 183 156 0 0 chr10 88511042 88511074 -51805691 + (CA)n Simple_repeat Simple_repeat 1 32 0 206 239 65 65 chr10 88511951 88512043 -51804722 - MIR SINE MIR -50 212 121 259 238 140 104 chr10 88512622 88512815 -51803950 + L2 LINE L2 3021 3220 -93 1525 207 100 2 chr10 88512826 88513242 -51803523 + MLT2B2 LTR ERVL 1 507 -13 226 319 30 4 chr10 88513312 88513418 -51803347 - MIR SINE MIR -64 144 35 969 189 50 0 chr10 88513743 88513923 -51802842 + MER5A DNA MER1_type 1 189 0 378 283 137 40 chr10 88514647 88514873 -51801892 - L3 LINE CR1 -86 1491 1244 360 315 47 8 chr10 88515583 88515710 -51801055 + MIR SINE MIR 23 154 -108 334 337 72 11 chr10 88516816 88516997 -51799768 + MIR SINE MIR 64 255 -7 346 294 44 50 chr10 88517279 88517439 -51799326 - MIR SINE MIR -14 248 90 2268 125 0 0 chr10 88517473 88517778 -51798987 + AluSq SINE Alu 1 305 -8 210 162 0 0 chr10 88518235 88518272 -51798493 + A-rich Low_complexity Low_complexity 1 37 0 556 269 17 71 chr10 88518507 88518745 -51798020 + MLT1K LTR MaLR 364 588 0 244 320 13 0 chr10 88518756 88518831 -51797934 + L2 LINE L2 3238 3313 0 26 30 0 0 chr10 88518987 88519020 -51797745 + AT_rich Low_complexity Low_complexity 1 33 0 545 231 25 55 chr10 88519194 88519393 -51797372 + L1MC5 LINE L1 7763 7955 -6 183 42 0 0 chr10 88519492 88519516 -51797249 + (CA)n Simple_repeat Simple_repeat 2 25 0 2229 213 69 22 chr10 88519800 88520377 -51796388 - L1MB7 LINE L1 -5 6179 5576 484 294 48 30 chr10 88520705 88520936 -51795829 - L1MEc LINE L1 -6012 384 150 2211 190 43 7 chr10 88521000 88521415 -51795350 - MSTB1 LTR MaLR -2 430 1 1051 171 88 0 chr10 88521812 88522017 -51794748 - Tigger1 DNA MER2_type 0 2418 2196 677 178 39 8 chr10 88522017 88522146 -51794619 + FLAM_C SINE Alu 1 133 -10 568 184 19 10 chr10 88522146 88522249 -51794516 - Tigger1 DNA MER2_type -209 2209 2106 8933 158 37 11 chr10 88522352 88523895 -51792870 - Tigger1 DNA MER2_type -833 1585 3 2173 191 39 5 chr10 88523895 88524303 -51792462 - MSTB LTR MaLR -4 422 1 195 378 54 18 chr10 88524345 88524456 -51792309 + L2 LINE L2 3155 3269 -3 2389 265 58 26 chr10 88524877 88527158 -51789607 + L1MB5 LINE L1 8 2214 -4430 216 0 0 0 chr10 88527158 88527182 -51789583 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 652 254 0 0 chr10 88527184 88527298 -51789467 - FLAM_A SINE Alu -18 115 2 2389 265 58 26 chr10 88527298 88527908 -51788857 + L1MB5 LINE L1 2214 3283 -3361 275 217 19 0 chr10 88527935 88528009 -51788756 + L1MB5 LINE L1 5042 5117 -1527 246 128 0 0 chr10 88528010 88528049 -51788716 + (TTTC)n Simple_repeat Simple_repeat 4 42 0 2527 224 32 31 chr10 88528073 88528862 -51787903 + L1MB5 LINE L1 5184 5970 -706 30678 114 13 57 chr10 88528947 88535381 -51781384 - L1PA7 LINE L1 0 6154 12 1949 196 26 33 chr10 88535408 88535861 -51780904 + L1MB5 LINE L1 5976 6425 -247 1379 235 11 50 chr10 88535873 88536251 -51780514 - MLT1A2 LTR MaLR -11 363 1 893 240 8 58 chr10 88536251 88536509 -51780256 + L1MB5 LINE L1 6421 6665 -7 494 269 156 6 chr10 88537114 88537274 -51779491 + MER5A DNA MER1_type 4 187 -2 258 280 76 34 chr10 88537338 88537456 -51779309 + L2 LINE L2 3149 3271 -1 369 303 43 0 chr10 88538283 88538445 -51778320 + MER112 DNA MER1_type 3 171 -89 308 282 167 33 chr10 88538504 88538834 -51777931 - L1 LINE L1 -2044 4102 3729 318 338 45 23 chr10 88538959 88539225 -51777540 + L1M3d LINE L1 1 272 -5619 * 4737 288 22 17 chr10 88539206 88540484 -51776281 + L1M3de LINE L1 2 1212 -5441 4033 253 63 23 chr10 88540592 88542473 -51774292 + L1M3de LINE L1 1201 2841 -3891 6255 15 0 1 chr10 88542474 88543191 -51773574 + L1PA3 LINE L1 5359 6074 -81 942 152 69 0 chr10 88543372 88543576 -51773189 + L1MCa LINE L1 1785 2002 -4424 * 6536 202 38 41 chr10 88543572 88545197 -51771568 - L1MCa LINE L1 -4801 1625 6 304 375 8 16 chr10 88545396 88545524 -51771241 + L2 LINE L2 2920 3046 -267 188 132 0 26 chr10 88545634 88545672 -51771093 + (TA)n Simple_repeat Simple_repeat 2 38 0 357 309 24 24 chr10 88545747 88545870 -51770895 - MIR SINE MIR -114 148 26 228 206 29 39 chr10 88545950 88546052 -51770713 - L1MC4 LINE L1 -1339 6703 6603 371 203 38 83 chr10 88546068 88546201 -51770564 + L2 LINE L2 3133 3259 -54 24 85 0 0 chr10 88547275 88547334 -51769431 + AT_rich Low_complexity Low_complexity 1 59 0 722 232 21 0 chr10 88547416 88547606 -51769159 + L1MA4 LINE L1 6100 6293 -7 21 0 0 0 chr10 88547606 88547627 -51769138 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 88547994 88548016 -51768749 + AT_rich Low_complexity Low_complexity 1 22 0 222 258 0 0 chr10 88548560 88548622 -51768143 + (CA)n Simple_repeat Simple_repeat 1 62 0 321 227 13 27 chr10 88549930 88550005 -51766760 - L2 LINE L2 0 3272 3199 846 251 39 68 chr10 88551072 88551410 -51765355 - MLT1D LTR MaLR -9 496 169 777 197 69 48 chr10 88551426 88551614 -51765151 - MLT1D LTR MaLR -313 192 1 412 288 59 35 chr10 88551646 88551816 -51764949 + MER96 DNA MER1_type 2 175 0 22 35 0 0 chr10 88553965 88553994 -51762771 + AT_rich Low_complexity Low_complexity 1 29 0 266 226 48 0 chr10 88554509 88554571 -51762194 - MIR SINE MIR -79 183 119 270 348 107 33 chr10 88554676 88555012 -51761753 + L3 LINE CR1 1210 1570 -7 237 196 18 36 chr10 88555021 88555077 -51761688 + MIR3 SINE MIR 105 159 -49 266 255 245 31 chr10 88555400 88555592 -51761173 - MIR SINE MIR -10 252 20 22 0 0 0 chr10 88557069 88557091 -51759674 + GC_rich Low_complexity Low_complexity 1 22 0 14739 196 23 8 chr10 88558358 88563807 -51752958 - L1PB1 LINE L1 -1 6866 1332 1011 286 103 45 chr10 88564173 88565228 -51751537 - L1MEc LINE L1 -2227 4313 3198 236 285 9 15 chr10 88565374 88565495 -51751270 - L1MEc LINE L1 -3373 3167 3046 1231 256 79 15 chr10 88565640 88566043 -51750722 + MLT1C LTR MaLR 1 429 -38 350 241 73 56 chr10 88566057 88566289 -51750476 - L1MEc LINE L1 -3672 2868 2633 343 217 136 65 chr10 88566319 88566503 -51750262 - L1MEc LINE L1 -4104 2617 2421 268 299 27 34 chr10 88566702 88566849 -51749916 - L1MEc LINE L1 -4570 2151 2006 318 87 0 0 chr10 88566859 88566905 -51749860 + (TG)n Simple_repeat Simple_repeat 2 47 0 284 304 0 0 chr10 88566985 88567064 -51749701 - MLT1A1 LTR MaLR -115 259 181 685 204 31 43 chr10 88567124 88567286 -51749479 - MLT1A1 LTR MaLR -205 160 1 6001 206 39 71 chr10 88567286 88568817 -51747948 - MLT1A2-int LTR MaLR 0 1735 255 * 6809 141 10 6 chr10 88568813 88570545 -51746220 + L1MA1 LINE L1 4562 6302 0 26 0 0 0 chr10 88570545 88570571 -51746194 + AT_rich Low_complexity Low_complexity 1 26 0 1323 198 23 0 chr10 88570577 88570840 -51745925 - MLT1A2-int LTR MaLR -1466 269 1 1041 191 60 132 chr10 88570840 88571243 -51745522 - MLT1A2 LTR MaLR 0 374 1 512 244 70 92 chr10 88571247 88571865 -51744900 - L1MEc LINE L1 -4628 1912 1309 1194 265 96 49 chr10 88572047 88572497 -51744268 + L1MCc LINE L1 814 1241 -5700 2013 132 7 0 chr10 88572497 88572808 -51743957 + AluSp SINE Alu 3 315 0 1194 265 96 49 chr10 88572808 88573604 -51743161 + L1MCc LINE L1 1241 2108 -4833 4489 175 7 32 chr10 88573754 88574453 -51742312 + L1MC2 LINE L1 5436 6108 -236 1914 170 0 3 chr10 88574453 88574759 -51742006 + AluSx SINE Alu 1 305 -7 4489 175 7 32 chr10 88574759 88574966 -51741799 + L1MC2 LINE L1 6108 6319 -25 946 239 42 31 chr10 88574985 88575274 -51741491 + L1MD2 LINE L1 5349 5640 -526 466 279 44 6 chr10 88575287 88575445 -51741320 - MER106B DNA MER1_type 0 1059 896 947 294 61 6 chr10 88575511 88575972 -51740793 + L1MD2 LINE L1 5644 6142 -24 675 244 58 16 chr10 88576030 88576272 -51740493 + L1MCc LINE L1 3140 3391 -3550 1322 256 116 44 chr10 88576294 88576947 -51739818 + L1MC4 LINE L1 6219 6918 -1124 1809 226 75 66 chr10 88577168 88577547 -51739218 + L1MD3 LINE L1 6907 7281 -714 2499 52 3 3 chr10 88577547 88577884 -51738881 - AluY SINE Alu 0 337 1 1809 226 75 66 chr10 88577884 88577943 -51738822 + L1MD3 LINE L1 7281 7338 -657 461 231 22 0 chr10 88577943 88578034 -51738731 + MLT1F1 LTR MaLR 33 125 -442 1809 226 75 66 chr10 88578034 88578572 -51738193 + L1MD3 LINE L1 7338 7980 -15 210 191 0 0 chr10 88579572 88579619 -51737146 + GA-rich Low_complexity Low_complexity 2 48 0 2057 135 0 0 chr10 88579711 88579992 -51736773 + AluSx SINE Alu 1 281 -31 22 56 0 0 chr10 88580361 88580397 -51736368 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 88580652 88580677 -51736088 + AT_rich Low_complexity Low_complexity 1 25 0 1581 214 0 3 chr10 88580990 88581298 -51735467 - AluJo SINE Alu 0 312 6 378 328 44 63 chr10 88581834 88582105 -51734660 + L1ME LINE L1 5325 5590 -531 362 183 0 12 chr10 88582747 88582829 -51733936 + GA-rich Low_complexity Low_complexity 3 83 0 306 0 0 0 chr10 88583184 88583218 -51733547 + (TG)n Simple_repeat Simple_repeat 2 35 0 615 253 91 139 chr10 88583420 88584045 -51732720 - MLT1G1 LTR MaLR 0 595 1 226 211 23 148 chr10 88584237 88584365 -51732400 - MLT1G1-int LTR MaLR -184 1187 1076 562 256 81 31 chr10 88584988 88585246 -51731519 - MLT1G1-int LTR MaLR -793 578 308 385 235 35 9 chr10 88585380 88585495 -51731270 - MLT1G1 LTR MaLR -1 594 477 629 253 121 49 chr10 88585577 88585882 -51730883 - MLT1G1 LTR MaLR -259 336 10 24 53 0 0 chr10 88585938 88585976 -51730789 + AT_rich Low_complexity Low_complexity 1 38 0 567 192 0 0 chr10 88586604 88586703 -51730062 + Tigger3b DNA MER2_type 2 100 -1131 3950 152 59 38 chr10 88586704 88586784 -51729981 + Tigger3b DNA MER2_type 275 352 -2676 1707 149 10 43 chr10 88586784 88587086 -51729679 + AluJb SINE Alu 21 312 0 3950 152 59 38 chr10 88587086 88587272 -51729493 + Tigger3b DNA MER2_type 352 533 -2495 3152 48 2 0 chr10 88587272 88587667 -51729098 + L1PA4 LINE L1 5757 6152 -3 3950 152 59 38 chr10 88587667 88588327 -51728438 + Tigger3b DNA MER2_type 533 1222 -9 2107 123 3 0 chr10 88588415 88588700 -51728065 + AluSg1 SINE Alu 1 286 -23 316 242 22 22 chr10 88588700 88588781 -51727984 - L1MC4 LINE L1 -1344 6698 6615 * 360 247 0 32 chr10 88588701 88588794 -51727971 + L1MC4 LINE L1 6614 6703 -1339 41321 29 21 1 chr10 88589519 88595551 -51721214 + L1HS LINE L1 1 6155 0 468 0 0 0 chr10 88595600 88595652 -51721113 + (A)n Simple_repeat Simple_repeat 1 52 0 2293 109 10 0 chr10 88595941 88596245 -51720520 + AluSc SINE Alu 1 307 -2 669 100 0 10 chr10 88597023 88597123 -51719642 + AluSc SINE Alu 1 99 -210 2520 80 0 0 chr10 88597304 88597616 -51719149 - AluSx SINE Alu 0 312 1 494 223 60 82 chr10 88597751 88597935 -51718830 - MLT2B1 LTR ERVL 0 554 375 * 646 171 0 39 chr10 88597931 88598060 -51718705 + MSTC LTR MaLR 305 428 0 * 1316 176 48 45 chr10 88598060 88598365 -51718400 - MLT2B1 LTR ERVL -214 306 1 336 356 17 34 chr10 88598413 88598652 -51718113 - L1M4 LINE L1 -3227 2919 2685 260 328 16 5 chr10 88598792 88598981 -51717784 - L1M4 LINE L1 -3559 2587 2397 21 0 0 0 chr10 88599094 88599115 -51717650 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 88599466 88599492 -51717273 + AT_rich Low_complexity Low_complexity 1 26 0 12377 177 14 16 chr10 88599949 88602461 -51714304 - L1PA13 LINE L1 -4 6159 3657 2082 106 14 7 chr10 88602461 88602753 -51714012 - AluSg1 SINE Alu -14 295 2 12377 177 14 16 chr10 88602753 88603552 -51713213 - L1PA13 LINE L1 -2506 3657 2857 342 325 107 55 chr10 88603748 88604208 -51712557 - L1M4 LINE L1 -2720 3426 2922 1618 167 38 28 chr10 88604208 88604495 -51712270 - AluJb SINE Alu -12 300 11 342 325 107 55 chr10 88604495 88604671 -51712094 - L1M4 LINE L1 -3224 2922 2757 22 35 0 0 chr10 88605380 88605409 -51711356 + AT_rich Low_complexity Low_complexity 1 29 0 342 0 0 0 chr10 88605835 88605873 -51710892 + (CA)n Simple_repeat Simple_repeat 2 39 0 1117 243 86 11 chr10 88609158 88609585 -51707180 - MLT1H LTR MaLR 0 549 60 305 292 67 8 chr10 88609655 88609775 -51706990 - MIR SINE MIR -93 169 43 311 274 105 16 chr10 88612439 88612563 -51704202 - L2 LINE L2 0 3272 3138 1127 295 118 58 chr10 88612740 88613540 -51703225 - L2 LINE L2 -420 2894 2047 355 288 165 18 chr10 88613990 88614160 -51702605 + MIR SINE MIR 38 232 -30 233 196 18 0 chr10 88614536 88614592 -51702173 + (TATG)n Simple_repeat Simple_repeat 3 59 0 202 342 50 30 chr10 88616364 88616566 -51700199 + L2 LINE L2 2821 3026 -246 237 319 6 35 chr10 88617654 88617823 -51698942 + (TA)n Simple_repeat Simple_repeat 2 165 0 330 219 0 62 chr10 88617824 88617920 -51698845 - L1MC4 LINE L1 -1339 6703 6614 258 207 0 0 chr10 88618617 88618675 -51698090 + (TA)n Simple_repeat Simple_repeat 1 58 0 2162 147 0 0 chr10 88618785 88619092 -51697673 + AluSx SINE Alu 1 307 -5 2629 58 0 0 chr10 88620308 88620616 -51696149 + AluY SINE Alu 1 308 -3 1614 88 4 32 chr10 88620675 88620924 -51695841 + L1PA8 LINE L1 5926 6167 -5 398 219 129 84 chr10 88621075 88621253 -51695512 - MER5A DNA MER1_type 0 189 4 697 189 88 83 chr10 88621299 88621516 -51695249 + MER20 DNA MER1_type 1 218 -1 1635 220 78 4 chr10 88622763 88623227 -51693538 - MER68 LTR ERV1 -55 528 1 2133 127 0 7 chr10 88624006 88624306 -51692459 + AluSx SINE Alu 1 298 -14 2314 108 0 0 chr10 88626018 88626315 -51690450 - AluSc SINE Alu -12 297 1 818 257 89 65 chr10 88630317 88630780 -51685985 - MLT1K LTR MaLR -2 474 1 7803 32 0 0 chr10 88631194 88632677 -51684088 - L1PA4 LINE L1 0 6155 4654 10556 37 6 0 chr10 88632677 88633948 -51682817 - L1P LINE L1 -1370 4776 3498 769 190 27 60 chr10 88633973 88634157 -51682608 + MLT1A2 LTR MaLR 1 178 -196 297 89 0 0 chr10 88634157 88634202 -51682563 + (TC)n Simple_repeat Simple_repeat 1 45 0 505 251 123 0 chr10 88634232 88634395 -51682370 + MLT1A2 LTR MaLR 208 390 0 213 344 0 32 chr10 88634395 88634488 -51682277 - MIR3 SINE MIR -114 94 5 288 0 0 0 chr10 88634805 88634837 -51681928 + (T)n Simple_repeat Simple_repeat 1 32 0 715 294 6 11 chr10 88634947 88635127 -51681638 + MER97c DNA MER1_type? 1 179 -911 558 251 27 35 chr10 88636754 88636816 -51679949 + MER97b DNA MER1_type? 59 120 -970 2268 161 2 54 chr10 88636816 88637226 -51679539 - MLT1B LTR MaLR 0 390 2 558 251 27 35 chr10 88637226 88637486 -51679279 + MER97b DNA MER1_type? 120 418 -672 3038 151 80 4 chr10 88637488 88638025 -51678740 + L1PA10 LINE L1 4615 5192 -954 4792 64 5 26 chr10 88638025 88639078 -51677687 - MER11A LTR ERVK 0 1266 1 6805 86 10 8 chr10 88639078 88640048 -51676717 + L1PA10 LINE L1 5187 6158 -10 471 263 229 0 chr10 88640049 88640224 -51676541 + MER97b DNA MER1_type? 406 620 -433 776 171 0 6 chr10 88640517 88640687 -51676078 + (CA)n Simple_repeat Simple_repeat 2 170 0 14748 128 73 43 chr10 88642381 88646147 -51670618 - MER41A-int LTR ERV1 -1514 3757 1 4634 79 0 0 chr10 88646198 88646752 -51670013 - MER41A LTR ERV1 0 554 1 204 163 0 0 chr10 88647130 88647173 -51669592 + (CA)n Simple_repeat Simple_repeat 2 44 0 287 259 12 59 chr10 88648836 88648921 -51667844 + MIR SINE MIR 34 114 -94 326 268 41 21 chr10 88651814 88651911 -51664854 + MIR SINE MIR 3 101 -161 257 396 87 3 chr10 88651918 88652216 -51664549 + LTR16A LTR ERVL 1 323 -127 1636 171 4 4 chr10 88652222 88652485 -51664280 - AluJo SINE Alu -45 267 5 21 36 0 0 chr10 88653439 88653467 -51663298 + AT_rich Low_complexity Low_complexity 1 28 0 180 77 0 0 chr10 88653520 88653546 -51663219 + (TC)n Simple_repeat Simple_repeat 1 26 0 222 62 0 0 chr10 88653569 88653601 -51663164 + (CA)n Simple_repeat Simple_repeat 2 33 0 389 284 93 27 chr10 88653921 88654104 -51662661 + MIR SINE MIR 67 261 -1 21 36 0 0 chr10 88654582 88654610 -51662155 + AT_rich Low_complexity Low_complexity 1 28 0 454 189 83 45 chr10 88655239 88655371 -51661394 + MIR SINE MIR 61 197 -65 419 205 35 18 chr10 88655456 88655627 -51661138 + GA-rich Low_complexity Low_complexity 1 174 0 388 224 82 41 chr10 88657155 88657327 -51659438 - MER5A DNA MER1_type -6 183 4 658 278 35 12 chr10 88657343 88657512 -51659253 + MER5B DNA MER1_type 6 178 0 1540 233 72 14 chr10 88657551 88657991 -51658774 + L1MB7 LINE L1 5698 6168 -2 470 226 96 0 chr10 88657992 88658107 -51658658 + MER5A DNA MER1_type 64 189 0 241 310 62 8 chr10 88658336 88658465 -51658300 + MIR SINE MIR 108 243 -19 204 222 62 49 chr10 88659543 88659624 -51657141 - MIR SINE MIR -48 214 133 349 269 65 9 chr10 88662073 88662181 -51654584 - L2 LINE L2 -2 3270 3157 640 286 208 40 chr10 88662273 88662724 -51654041 - L2 LINE L2 -421 2893 2367 268 300 199 25 chr10 88662801 88663070 -51653695 - L3 LINE CR1 -173 1404 1084 2975 9 0 0 chr10 88663070 88663388 -51653377 + AluYb8 SINE Alu 1 318 0 609 306 98 39 chr10 88663708 88664094 -51652671 + L2 LINE L2 2874 3282 -31 241 288 40 40 chr10 88664443 88664641 -51652124 - L1ME LINE L1 -305 5816 5619 2217 123 150 5 chr10 88664699 88665072 -51651693 - MSTA LTR MaLR -1 427 1 365 338 76 50 chr10 88665720 88666178 -51650587 - L1ME LINE L1 -2694 3452 2983 1733 166 3 14 chr10 88667352 88667636 -51649129 - LTR9 LTR ERV1 0 612 332 1656 71 28 0 chr10 88667633 88667845 -51648920 - LTR9 LTR ERV1 -394 218 1 * 594 301 117 9 chr10 88667870 88668195 -51648570 - L1MC4 LINE L1 -7 8035 7676 1799 231 9 14 chr10 88668201 88668545 -51648220 + L1MC4 LINE L1 7343 7686 -356 1193 192 77 0 chr10 88668545 88668753 -51648012 - MER58A DNA MER1_type 0 224 1 1799 231 9 14 chr10 88668753 88668850 -51647915 + L1MC4 LINE L1 7686 7782 -260 600 386 36 28 chr10 88668862 88669442 -51647323 + L1PA16 LINE L1 789 1373 -6201 303 317 0 10 chr10 88669581 88669682 -51647083 + L1PA16 LINE L1 2084 2183 -5398 13586 222 26 31 chr10 88669987 88673370 -51643395 + L1PA16 LINE L1 2256 5654 -1950 2861 91 6 0 chr10 88673370 88673723 -51643042 + THE1A LTR MaLR 1 355 0 11669 98 17 33 chr10 88673723 88675328 -51641437 + THE1A-int LTR MaLR 1 1580 0 2751 104 0 0 chr10 88675328 88675683 -51641082 + THE1A LTR MaLR 1 355 0 13586 222 26 31 chr10 88675683 88677531 -51639234 + L1PA16 LINE L1 5651 7499 -105 334 172 0 0 chr10 88677532 88677590 -51639175 + L1PA16 LINE L1 7536 7593 -11 2594 108 24 14 chr10 88677740 88678111 -51638654 + THE1C LTR MaLR 1 375 0 1085 242 91 24 chr10 88678176 88678506 -51638259 - L1MC4 LINE L1 -365 7677 7326 1706 167 83 6 chr10 88681686 88682034 -51634731 - MSTA LTR MaLR 0 428 54 253 306 0 0 chr10 88682156 88682218 -51634547 + L2 LINE L2 3210 3271 -1 820 293 20 24 chr10 88682422 88682675 -51634090 - MIR SINE MIR -1 261 10 2315 97 0 7 chr10 88683285 88683584 -51633181 + AluY SINE Alu 1 297 -14 335 327 193 19 chr10 88684917 88685296 -51631469 + L2 LINE L2 2869 3313 0 262 328 35 17 chr10 88685334 88685450 -51631315 + MIR SINE MIR 113 230 -32 387 258 86 20 chr10 88685629 88685780 -51630985 + MIR SINE MIR 102 262 0 853 133 11 22 chr10 88686281 88686461 -51630304 + GA-rich Low_complexity Low_complexity 3 180 0 502 290 105 5 chr10 88687332 88687532 -51629233 + MIR SINE MIR 18 237 -25 258 352 104 11 chr10 88688517 88688699 -51628066 + MIR SINE MIR 57 255 -7 599 280 109 22 chr10 88688718 88689079 -51627686 + L2 LINE L2 2616 3058 -255 677 249 100 74 chr10 88689079 88689509 -51627256 - LTR16A1 LTR ERVL 0 457 17 370 284 10 0 chr10 88689618 88689720 -51627045 + L2 LINE L2 3161 3263 -50 1011 131 125 0 chr10 88690534 88690702 -51626063 + AluSg/x SINE Alu 122 310 -2 180 0 0 0 chr10 88690938 88690958 -51625807 + (CTG)n Simple_repeat Simple_repeat 2 21 0 197 231 0 39 chr10 88692067 88692119 -51624646 - MIR SINE MIR -128 134 85 310 277 99 21 chr10 88692704 88692845 -51623920 - MIR SINE MIR 0 262 111 432 310 63 24 chr10 88693138 88693470 -51623295 + MLT1K LTR MaLR 236 580 -8 367 364 53 6 chr10 88693707 88693887 -51622878 + MIR SINE MIR 5 191 -65 507 230 100 74 chr10 88694622 88694852 -51621913 - L2 LINE L2 -1 3312 3077 1588 199 43 0 chr10 88694892 88695173 -51621592 + AluJo SINE Alu 1 293 -19 381 133 0 0 chr10 88695218 88695278 -51621487 + AluS SINE Alu 1 60 -243 2122 86 7 0 chr10 88695282 88695562 -51621203 - AluY SINE Alu -10 301 20 270 0 0 0 chr10 88695730 88695760 -51621005 + (CA)n Simple_repeat Simple_repeat 1 30 0 250 0 0 0 chr10 88695966 88695995 -51620770 - L1PA2 LINE L1 -432 5723 5695 3757 16 0 0 chr10 88695995 88696423 -51620342 + L1PA2 LINE L1 5728 6155 0 22 0 0 0 chr10 88697131 88697153 -51619612 + AT_rich Low_complexity Low_complexity 1 22 0 727 311 42 14 chr10 88697985 88698342 -51618423 + MLT1I LTR MaLR 39 405 -4 2718 231 59 46 chr10 88699377 88700445 -51616320 - L1M4 LINE L1 -1568 4578 3497 210 195 39 0 chr10 88700608 88700685 -51616080 + CT-rich Low_complexity Low_complexity 4 83 0 750 351 42 17 chr10 88700744 88701234 -51615531 + L2 LINE L2 2567 3068 -245 1170 207 92 21 chr10 88701247 88701585 -51615180 - MLT1A2 LTR MaLR -11 363 2 182 91 30 0 chr10 88701813 88701846 -51614919 + (TG)n Simple_repeat Simple_repeat 2 35 0 666 232 80 2 chr10 88702816 88703106 -51613659 + MLT2F LTR ERVL 19 377 -286 215 208 26 78 chr10 88703334 88703411 -51613354 - L2 LINE L2 -6 3266 3194 666 284 53 9 chr10 88704193 88704514 -51612251 - L1M4 LINE L1 -1071 5075 4741 434 252 17 0 chr10 88704525 88704640 -51612125 - MER20 DNA MER1_type -19 200 84 328 320 135 3 chr10 88704680 88704992 -51611773 - L1ME LINE L1 -4578 1502 1150 1033 234 39 72 chr10 88704998 88705430 -51611335 - LTR52 LTR ERVL -3 418 1 739 270 130 83 chr10 88705555 88706440 -51610325 - L1ME LINE L1 -5145 925 19 229 259 78 9 chr10 88706491 88706607 -51610158 - L1M4 LINE L1 -846 5300 5177 922 58 7 29 chr10 88706625 88706764 -51610001 - L1PA4 LINE L1 -1 6154 6019 997 219 75 69 chr10 88706938 88707555 -51609210 - L1ME1 LINE L1 -8 6245 5644 2925 242 27 25 chr10 88707568 88709214 -51607551 - L1ME1 LINE L1 -3038 3177 1559 233 250 16 0 chr10 88709338 88709402 -51607363 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 30 69 0 0 chr10 88709977 88710035 -51606730 + AT_rich Low_complexity Low_complexity 1 58 0 185 35 69 0 chr10 88710041 88710070 -51606695 + T-rich Low_complexity Low_complexity 1 31 0 2132 100 44 20 chr10 88710070 88710411 -51606354 - L1PA10 LINE L1 -21 6147 5799 22 56 0 0 chr10 88710897 88710933 -51605832 + AT_rich Low_complexity Low_complexity 1 36 0 560 176 59 0 chr10 88711106 88711225 -51605540 + L1MC3 LINE L1 7651 7776 -9 29 0 0 0 chr10 88711582 88711611 -51605154 + AT_rich Low_complexity Low_complexity 1 29 0 11654 189 27 30 chr10 88711611 88714961 -51601804 - L1PA14 LINE L1 -5 6156 2798 641 128 0 0 chr10 88714961 88715063 -51601702 - L1PA11 LINE L1 0 6174 6073 11654 189 27 30 chr10 88715063 88715133 -51601632 - L1PA14 LINE L1 -3363 2798 2729 2108 80 19 51 chr10 88715133 88715444 -51601321 - AluY SINE Alu -10 301 1 11654 189 27 30 chr10 88715444 88715915 -51600850 - L1PA14 LINE L1 -3432 2729 2272 1666 247 65 64 chr10 88716959 88717873 -51598892 - L1ME1 LINE L1 -66 6100 5189 313 136 30 0 chr10 88717903 88717969 -51598796 - L1ME1 LINE L1 -1069 5077 5010 1480 242 59 41 chr10 88718037 88718662 -51598103 + L1MCa LINE L1 1519 2347 -4260 1128 227 72 38 chr10 88718694 88719253 -51597512 + Charlie7 DNA MER1_type 1922 2499 -113 24 85 0 0 chr10 88719258 88719317 -51597448 + AT_rich Low_complexity Low_complexity 1 59 0 406 293 40 64 chr10 88719523 88719772 -51596993 + MIR SINE MIR 1 243 -19 435 221 84 46 chr10 88719821 88719952 -51596813 - MIR SINE MIR -21 241 106 842 61 0 9 chr10 88720232 88720346 -51596419 - MLT2A1 LTR ERVL -331 113 1 238 341 67 24 chr10 88720422 88720586 -51596179 - L2 LINE L2 -9 3304 3134 302 169 39 26 chr10 88720898 88720975 -51595790 - L1MEc LINE L1 -4436 1960 1883 348 319 78 16 chr10 88720997 88721188 -51595577 + L2 LINE L2 3104 3306 -7 255 299 19 28 chr10 88721702 88721809 -51594956 - MER94 DNA DNA -17 117 12 244 319 22 30 chr10 88722506 88722641 -51594124 + CT-rich Low_complexity Low_complexity 5 138 0 453 299 26 13 chr10 88723339 88723493 -51593272 - L2 LINE L2 0 3313 3158 203 200 63 74 chr10 88723523 88723618 -51593147 - L2 LINE L2 -372 2900 2807 21 36 0 0 chr10 88724407 88724435 -51592330 + AT_rich Low_complexity Low_complexity 1 28 0 211 294 10 29 chr10 88724863 88724965 -51591800 + GA-rich Low_complexity Low_complexity 4 103 0 1071 207 67 81 chr10 88725103 88725461 -51591304 - MLT1D LTR MaLR 0 505 153 3891 150 17 14 chr10 88725507 88726207 -51590558 - MER50 LTR ERV1 -23 711 10 481 217 40 91 chr10 88726195 88726393 -51590372 - MLT1D LTR MaLR -313 192 5 * 252 235 0 0 chr10 88727206 88727274 -51589491 + (CA)n Simple_repeat Simple_repeat 1 68 0 2013 169 29 23 chr10 88727328 88727712 -51589053 + MLT1B LTR MaLR 5 390 0 737 145 8 0 chr10 88727814 88727945 -51588820 - L1MA4A LINE L1 -5 6298 6167 24 32 0 0 chr10 88729122 88729153 -51587612 + AT_rich Low_complexity Low_complexity 1 31 0 265 47 47 0 chr10 88729293 88729336 -51587429 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 253 237 10 41 chr10 88729460 88729557 -51587208 - L1MC/D LINE L1 -1983 5825 5732 456 176 8 17 chr10 88730208 88730327 -51586438 + GA-rich Low_complexity Low_complexity 3 120 0 241 196 20 0 chr10 88730465 88730516 -51586249 + T-rich Low_complexity Low_complexity 4 55 0 279 331 30 23 chr10 88730598 88730731 -51586034 + MIR SINE MIR 36 169 -93 290 273 173 33 chr10 88731536 88731686 -51585079 - MIR SINE MIR -71 191 21 221 335 103 68 chr10 88732015 88732296 -51584469 - L2 LINE L2 -41 3231 2941 467 290 87 55 chr10 88732304 88732614 -51584151 - MLT1I LTR MaLR -19 390 71 2371 83 10 3 chr10 88732860 88733160 -51583605 + AluSx SINE Alu 11 312 0 292 363 51 0 chr10 88733943 88734100 -51582665 + MIR SINE MIR 98 262 0 387 305 28 17 chr10 88734731 88734908 -51581857 - L2 LINE L2 -58 3255 3077 215 320 131 49 chr10 88736187 88736309 -51580456 - MIR SINE MIR -110 152 21 2454 91 3 0 chr10 88736670 88736979 -51579786 - AluY SINE Alu -1 310 1 228 305 55 78 chr10 88737083 88737211 -51579554 - MIR3 SINE MIR -46 162 38 255 269 193 8 chr10 88737415 88737534 -51579231 + MIR SINE MIR 118 258 -4 2220 107 30 0 chr10 88738350 88738648 -51578117 - AluSc SINE Alu -2 307 1 518 208 42 17 chr10 88740596 88740716 -51576049 - MER5A DNA MER1_type -64 125 3 633 298 0 0 chr10 88741565 88741733 -51575032 - LTR33 LTR ERVL -353 168 1 757 289 116 72 chr10 88742865 88743213 -51573552 + L2 LINE L2 2835 3209 -104 225 0 0 0 chr10 88743213 88743238 -51573527 + (TG)n Simple_repeat Simple_repeat 2 26 0 757 289 116 72 chr10 88743238 88743345 -51573420 + L2 LINE L2 3209 3310 -3 4222 164 56 1 chr10 88743345 88744026 -51572739 - MER72 LTR ERV1 0 722 5 299 323 141 27 chr10 88744345 88744565 -51572200 + MIR SINE MIR 15 259 -3 272 319 69 28 chr10 88745436 88745580 -51571185 - MER5A DNA MER1_type -5 184 35 * 631 252 56 0 chr10 88745452 88745595 -51571170 + MER5A DNA MER1_type 38 188 -1 2457 212 35 53 chr10 88745911 88746534 -51570231 + LTR9 LTR ERV1 1 612 0 233 339 67 12 chr10 88746747 88746912 -51569853 - MIR SINE MIR 0 262 89 452 311 104 42 chr10 88747060 88747414 -51569351 - MLT1I LTR MaLR -15 394 19 854 272 79 20 chr10 88747651 88748004 -51568761 - L1ME3A LINE L1 -228 5942 5569 343 180 54 108 chr10 88748004 88748115 -51568650 + L1ME LINE L1 5472 5576 -590 1584 310 50 37 chr10 88748119 88748904 -51567861 - ERVL LTR ERVL -1227 4537 3743 915 150 8 0 chr10 88749129 88749262 -51567503 + AluJo SINE Alu 1 134 -178 693 186 0 0 chr10 88749303 88749405 -51567360 + AluJb SINE Alu 3 104 -208 * 744 167 0 38 chr10 88749402 88749534 -51567231 + FLAM_A SINE Alu 16 142 0 1289 201 9 88 chr10 88749543 88749861 -51566904 + AluJo SINE Alu 3 295 -17 260 215 31 15 chr10 88749992 88750057 -51566708 + L1M3d LINE L1 1 66 -5825 * 294 329 71 24 chr10 88750039 88750249 -51566516 + L1M4 LINE L1 48 267 -6275 14406 205 89 28 chr10 88750560 88751129 -51565636 + L1M1 LINE L1 1180 1713 -5852 195 42 0 0 chr10 88751129 88751153 -51565612 + (GA)n Simple_repeat Simple_repeat 1 24 0 14406 205 89 28 chr10 88751153 88755636 -51561129 + L1M1 LINE L1 1713 6550 -1015 1408 50 0 17 chr10 88755939 88756120 -51560645 - AluY SINE Alu -14 297 120 344 318 11 28 chr10 88756488 88756664 -51560101 + CT-rich Low_complexity Low_complexity 2 174 0 814 127 24 0 chr10 88757154 88757280 -51559485 + AluSp/q SINE Alu 177 305 -8 248 210 145 0 chr10 88757498 88757560 -51559205 - MER116 DNA Mariner -3 77 7 431 294 128 11 chr10 88758876 88759063 -51557702 - MIR SINE MIR -17 245 37 491 341 172 12 chr10 88759128 88759448 -51557317 + L2 LINE L2 2943 3313 0 2172 223 60 4 chr10 88759959 88760426 -51556339 - MLT1D LTR MaLR -8 497 5 201 376 116 17 chr10 88760894 88761075 -51555690 + L2 LINE L2 2779 2977 -337 283 314 44 44 chr10 88761200 88761359 -51555406 + L2 LINE L2 3150 3308 -5 354 301 10 10 chr10 88761441 88761544 -51555221 - L2 LINE L2 -581 2733 2631 10993 67 2 3 chr10 88761654 88763782 -51552983 - L1PA6 LINE L1 0 6154 4025 208 397 16 8 chr10 88764469 88764595 -51552170 + L2 LINE L2 2283 2409 -905 27865 100 9 12 chr10 88764646 88768657 -51548108 + L1PA14 LINE L1 11 4009 -2137 5622 145 13 5 chr10 88768846 88769834 -51546931 + L1PA14 LINE L1 5151 6158 -3 2853 197 36 20 chr10 88769863 88770594 -51546171 + L1 LINE L1 3081 3822 -2324 771 184 9 0 chr10 88770623 88770737 -51546028 + FRAM SINE Alu 1 114 -62 1298 245 44 45 chr10 88770737 88771619 -51545146 + L1MB5 LINE L1 1471 2437 -3947 577 238 30 12 chr10 88771605 88771773 -51544992 + L1MB5 LINE L1 4765 4935 -1447 * 2975 215 44 39 chr10 88771746 88771873 -51544892 + L1MB5 LINE L1 5600 5725 -685 3391 44 0 0 chr10 88771873 88772258 -51544507 + L1PA5 LINE L1 5770 6154 0 2975 215 44 39 chr10 88772258 88772927 -51543838 + L1MB5 LINE L1 5725 6400 -10 1067 314 76 15 chr10 88772941 88773402 -51543363 - ERVL LTR ERVL -2432 3332 2844 27 0 0 0 chr10 88773555 88773582 -51543183 + AT_rich Low_complexity Low_complexity 1 27 0 2342 77 0 26 chr10 88773609 88773922 -51542843 - AluY SINE Alu -6 305 1 28 0 0 0 chr10 88775022 88775050 -51541715 + AT_rich Low_complexity Low_complexity 1 28 0 1824 256 45 11 chr10 88775734 88776359 -51540406 - MER114 LTR ERV 0 648 3 31 44 0 0 chr10 88776403 88776448 -51540317 + AT_rich Low_complexity Low_complexity 1 45 0 445 232 263 25 chr10 88776877 88777075 -51539690 + MIR SINE MIR 1 245 -17 183 309 29 0 chr10 88778554 88778622 -51538143 - L2 LINE L2 -3 3269 3200 931 190 20 41 chr10 88778645 88778840 -51537925 - MLT1C LTR MaLR 0 467 277 342 153 17 0 chr10 88778836 88778895 -51537870 - MLT1C LTR MaLR -355 112 53 * 258 362 38 30 chr10 88779140 88779375 -51537390 - L2 LINE L2 -2032 1282 1046 1084 203 150 55 chr10 88780374 88780862 -51535903 + L1MC4 LINE L1 7187 7720 -322 290 333 49 0 chr10 88780862 88781006 -51535759 + MIR SINE MIR 99 249 -13 181 275 0 0 chr10 88781270 88781310 -51535455 + L2 LINE L2 3020 3059 -254 465 226 44 77 chr10 88781379 88781560 -51535205 + L2 LINE L2 3100 3274 -39 4182 246 85 23 chr10 88782213 88784010 -51532755 - L1MB1 LINE L1 -4 6164 4206 462 53 13 26 chr10 88784010 88784086 -51532679 + (TA)n Simple_repeat Simple_repeat 1 75 0 4182 246 85 23 chr10 88784086 88784448 -51532317 - L1MB1 LINE L1 -1962 4206 3868 403 205 88 94 chr10 88784449 88784620 -51532145 - L1MB1 LINE L1 -2890 3256 3087 1529 275 46 12 chr10 88784631 88785412 -51531353 + L1M1 LINE L1 3046 3885 -3680 406 62 46 0 chr10 88785412 88785477 -51531288 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1529 275 46 12 chr10 88785477 88785667 -51531098 + L1M1 LINE L1 3885 4067 -3498 621 163 23 39 chr10 88785712 88785841 -51530924 + MER6 DNA MER2_type 736 862 -3 1311 187 26 29 chr10 88785845 88786188 -51530577 + L1M1 LINE L1 4067 4408 -3157 486 111 16 95 chr10 88786189 88786315 -51530450 - L1PA16 LINE L1 -4 6162 6047 6791 218 18 31 chr10 88786421 88788172 -51528593 + L1MA6 LINE L1 2376 4104 -2042 3238 201 56 7 chr10 88788207 88788924 -51527841 + L1MA6 LINE L1 4407 5158 -988 1757 172 24 11 chr10 88788925 88789297 -51527468 + L1MA6 LINE L1 5923 6299 -1 1188 224 65 68 chr10 88789317 88789930 -51526835 - L1MC5 LINE L1 -337 7624 7014 710 248 35 90 chr10 88790037 88790380 -51526385 - L1MC5 LINE L1 -1013 6948 6625 207 0 0 0 chr10 88790380 88790403 -51526362 + (CA)n Simple_repeat Simple_repeat 2 24 0 198 0 0 0 chr10 88790844 88790866 -51525899 + (CA)n Simple_repeat Simple_repeat 1 22 0 1592 286 31 29 chr10 88790874 88791492 -51525273 - L1MC5 LINE L1 -1862 5946 5328 327 317 85 42 chr10 88791493 88791752 -51525013 - L1MC5 LINE L1 -796 5350 5081 1589 194 30 53 chr10 88791805 88792409 -51524356 - L1MD2 LINE L1 -15 6227 5668 1555 202 79 57 chr10 88792608 88793078 -51523687 - MLT1D LTR MaLR -2 503 24 1889 244 23 26 chr10 88793097 88794009 -51522756 - L1MD2 LINE L1 -749 5397 4688 22 0 0 0 chr10 88794103 88794125 -51522640 + AT_rich Low_complexity Low_complexity 1 22 0 1362 246 13 26 chr10 88794533 88794919 -51521846 + L1ME1 LINE L1 5260 5640 -2168 446 211 58 26 chr10 88794934 88795090 -51521675 + Charlie4a DNA MER1_type 203 363 -145 284 348 70 25 chr10 88795600 88795758 -51521007 + MER96 DNA MER1_type? 11 175 0 207 299 45 0 chr10 88795758 88795825 -51520940 - MIR SINE MIR -81 127 58 21 0 0 0 chr10 88796118 88796139 -51520626 + AT_rich Low_complexity Low_complexity 1 21 0 1340 239 141 9 chr10 88796323 88796684 -51520081 + L1ME1 LINE L1 5612 6048 -118 2188 46 25 0 chr10 88796684 88796967 -51519798 - L1PA5 LINE L1 -4 6150 5861 1340 239 141 9 chr10 88796967 88797066 -51519699 + L1ME1 LINE L1 6048 6133 -33 516 229 19 38 chr10 88797076 88797233 -51519532 + Charlie4a DNA MER1_type 355 508 0 507 17 0 0 chr10 88797372 88797432 -51519333 + (TG)n Simple_repeat Simple_repeat 1 60 0 227 298 19 19 chr10 88797630 88797734 -51519031 - L1MEd LINE L1 -5994 125 22 22 0 0 0 chr10 88797793 88797815 -51518950 + AT_rich Low_complexity Low_complexity 1 22 0 358 304 49 46 chr10 88798350 88798613 -51518152 + L3 LINE CR1 1311 1574 -3 26 0 0 0 chr10 88798773 88798799 -51517966 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr10 88798855 88798906 -51517859 + (TG)n Simple_repeat Simple_repeat 2 52 0 222 62 0 0 chr10 88799050 88799082 -51517683 + (T)n Simple_repeat Simple_repeat 1 32 0 1020 212 119 99 chr10 88799267 88799307 -51517458 - MLT2B1 LTR ERVL -1 519 481 342 67 0 0 chr10 88799307 88799352 -51517413 + (TG)n Simple_repeat Simple_repeat 1 45 0 186 43 0 0 chr10 88799361 88799384 -51517381 + (GA)n Simple_repeat Simple_repeat 2 24 0 1020 212 119 99 chr10 88799384 88799838 -51516927 - MLT2B1 LTR ERVL -46 474 5 612 266 38 49 chr10 88799854 88800146 -51516619 - L1ME LINE L1 -528 5918 5628 351 185 87 35 chr10 88800197 88800370 -51516395 - L1M4 LINE L1 -2848 3298 3117 213 264 11 46 chr10 88800387 88800474 -51516291 + L2 LINE L2 3189 3272 0 3218 133 6 4 chr10 88802212 88802708 -51514057 + LOR1a LTR ERV1 1 497 0 1779 227 27 15 chr10 88805130 88805930 -51510835 + L1MC/D LINE L1 4790 5596 -743 3380 241 55 6 chr10 88805940 88807036 -51509729 - L1ME LINE L1 -2756 3670 2522 2752 165 73 21 chr10 88807101 88807785 -51508980 - L1MCa LINE L1 -3898 2528 1806 418 246 24 42 chr10 88807790 88807957 -51508808 + CT-rich Low_complexity Low_complexity 4 167 0 245 50 0 50 chr10 88808001 88808041 -51508724 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 8271 196 32 15 chr10 88808235 88810195 -51506570 + L1MA9 LINE L1 3521 5522 -743 1299 166 38 10 chr10 88810228 88810517 -51506248 + L1MA9 LINE L1 6013 6309 -3 3485 245 27 2 chr10 88811380 88812294 -51504471 + L1 LINE L1 2171 3107 -3039 180 0 0 0 chr10 88812413 88812433 -51504332 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 88812810 88812831 -51503934 + AT_rich Low_complexity Low_complexity 1 21 0 183 277 69 23 chr10 88814028 88814158 -51502607 + MIR3 SINE MIR 56 191 -17 260 333 116 52 chr10 88814748 88815135 -51501630 - L2 LINE L2 0 3272 2861 327 349 83 31 chr10 88815170 88815497 -51501268 + L2 LINE L2 1421 1764 -1550 280 179 26 0 chr10 88815497 88815575 -51501190 + CT-rich Low_complexity Low_complexity 3 82 0 1776 173 3 7 chr10 88815576 88815883 -51500882 - AluJb SINE Alu -6 306 1 22 35 0 0 chr10 88815891 88815920 -51500845 + AT_rich Low_complexity Low_complexity 1 29 0 207 175 0 0 chr10 88815949 88815989 -51500776 + CT-rich Low_complexity Low_complexity 1 40 0 1507 310 53 21 chr10 88816250 88817399 -51499366 - L1ME3A LINE L1 -220 6019 4835 1980 290 67 44 chr10 88817399 88819022 -51497743 - L1ME3A LINE L1 -2104 4111 2451 410 304 37 6 chr10 88819024 88819185 -51497580 + L2 LINE L2 2242 2407 -907 1818 145 62 0 chr10 88820442 88820731 -51496034 - AluSx SINE Alu -5 307 1 185 139 23 0 chr10 88820829 88820872 -51495893 + (CA)n Simple_repeat Simple_repeat 1 44 0 1166 290 3 19 chr10 88821039 88821353 -51495412 + L1MDb LINE L1 9 317 -6092 332 327 9 0 chr10 88821524 88821634 -51495131 + HERVL LTR ERVL 3767 3877 -1777 744 329 55 7 chr10 88821638 88821927 -51494838 + HERVL LTR ERVL 4006 4308 -1456 690 283 56 42 chr10 88822093 88822379 -51494386 + HERVL LTR ERVL 4509 4798 -966 895 308 47 38 chr10 88822412 88822918 -51493847 + HERVL LTR ERVL 4870 5380 -384 23 0 0 0 chr10 88825516 88825539 -51491226 + AT_rich Low_complexity Low_complexity 1 23 0 228 345 103 9 chr10 88825578 88825694 -51491071 - MIR SINE MIR -110 152 26 351 337 84 72 chr10 88825954 88826301 -51490464 - L2 LINE L2 -32 3240 2890 290 374 40 59 chr10 88827074 88827347 -51489418 - L2 LINE L2 -10 3262 2995 263 189 0 14 chr10 88827919 88827993 -51488772 - L1ME3A LINE L1 -4128 2268 2196 7691 25 3 0 chr10 88827995 88829662 -51487103 - L1PA3 LINE L1 -5 6150 4481 10515 35 0 0 chr10 88829765 88831030 -51485735 + L1P LINE L1 3187 4451 -1695 336 268 26 88 chr10 88831030 88831224 -51485541 - L1ME3A LINE L1 -4181 2215 2034 1020 303 69 42 chr10 88831370 88832399 -51484366 - L1ME LINE L1 -4441 1955 847 441 0 0 0 chr10 88832399 88832448 -51484317 + (TG)n Simple_repeat Simple_repeat 2 50 0 1020 303 69 42 chr10 88832448 88832640 -51484125 - L1ME LINE L1 -5549 847 661 2629 104 0 6 chr10 88832850 88833215 -51483550 - THE1B LTR MaLR -1 363 1 374 369 10 5 chr10 88833389 88833595 -51483170 - L1ME LINE L1 -6016 380 174 * 397 238 59 80 chr10 88833590 88833729 -51483036 - L1M3 LINE L1 -568 5583 5463 1703 92 0 0 chr10 88834074 88834291 -51482474 + AluSq SINE Alu 1 217 -96 206 326 33 0 chr10 88834946 88835038 -51481727 - MIR SINE MIR -69 139 45 3220 170 81 14 chr10 88835121 88835749 -51481016 + LTR51 LTR ERV1 1 670 -1 253 263 12 0 chr10 88836500 88836580 -51480185 + (TG)n Simple_repeat Simple_repeat 1 81 0 350 299 36 36 chr10 88837200 88837337 -51479428 - MIR SINE MIR -39 223 87 352 307 54 24 chr10 88837651 88837817 -51478948 + MIR SINE MIR 21 191 -71 2387 211 146 23 chr10 88837907 88838608 -51478157 - LTR48 LTR ERV1 0 787 1 1812 238 45 19 chr10 88839475 88839962 -51476803 - LTR26 LTR ERV1 0 603 104 734 333 63 9 chr10 88841246 88841783 -51474982 + L1ME4a LINE L1 5556 6121 0 478 256 138 19 chr10 88842158 88842318 -51474447 + MER5A DNA MER1_type 11 189 0 300 309 62 28 chr10 88842433 88842611 -51474154 + MIR SINE MIR 79 262 0 4501 118 20 10 chr10 88843648 88844332 -51472433 + LTR8 LTR ERV1 1 691 0 512 255 71 52 chr10 88845520 88845905 -51470860 - MER31-int LTR ERV1 -2946 1990 1563 587 241 68 45 chr10 88845914 88846180 -51470585 - LTR57-int LTR ERVL -3832 1511 1240 * 736 119 19 183 chr10 88846113 88846381 -51470384 - MER57-int LTR ERV1 -215 3129 858 606 238 21 61 chr10 88846397 88846653 -51470112 - MER57-int LTR ERV1 -3633 2313 1840 443 171 154 45 chr10 88846731 88846870 -51469895 - MER57-int LTR ERV1 -4433 1667 503 307 270 45 27 chr10 88847589 88847700 -51469065 - MER57-int LTR ERV1 -5433 2104 1992 545 232 52 103 chr10 88848081 88848448 -51468317 - MER34B LTR ERV1 0 565 218 548 130 0 0 chr10 88848480 88848557 -51468208 + U6 snRNA snRNA 1 77 -30 30 27 0 0 chr10 88848593 88848630 -51468135 + AT_rich Low_complexity Low_complexity 1 37 0 235 200 133 56 chr10 88848666 88848756 -51468009 - MER34 LTR ERV1 -420 122 26 298 302 111 32 chr10 88848767 88848893 -51467872 + L2 LINE L2 3137 3272 0 2227 108 3 0 chr10 88850627 88850923 -51465842 + AluSp SINE Alu 1 297 -16 1659 256 89 16 chr10 88850943 88851330 -51465435 - MLT1E2 LTR MaLR -25 601 161 2647 152 52 2 chr10 88851330 88851792 -51464973 - MER31A LTR ERV1 0 485 1 1659 256 89 16 chr10 88851792 88851955 -51464810 - MLT1E2 LTR MaLR -465 161 11 2158 223 48 21 chr10 88852392 88852908 -51463857 - LTR31 LTR ERV1 -15 604 75 373 348 42 0 chr10 88853250 88853368 -51463397 - L2 LINE L2 0 3313 3191 207 259 136 0 chr10 88854432 88854513 -51462252 - MIR SINE MIR -118 144 53 240 377 0 0 chr10 88854552 88854629 -51462136 - MIR SINE MIR -183 79 3 909 206 47 131 chr10 88854740 88855323 -51461442 + MER34 LTR ERV1 13 585 0 1848 137 0 0 chr10 88855474 88855737 -51461028 - AluSx SINE Alu -12 300 38 604 296 106 55 chr10 88856406 88856976 -51459789 + L2 LINE L2 2654 3278 -35 1153 236 73 58 chr10 88858041 88858490 -51458275 + L1MD2 LINE L1 5904 6359 0 189 0 0 0 chr10 88858494 88858515 -51458250 + (A)n Simple_repeat Simple_repeat 1 21 0 1061 277 10 62 chr10 88859361 88859848 -51456917 + L1ME1 LINE L1 917 1378 -5165 327 233 12 12 chr10 88859859 88859945 -51456820 + L1ME1 LINE L1 1469 1554 -4986 7846 262 46 27 chr10 88859951 88862409 -51454356 + L1ME1 LINE L1 2092 4688 -1872 3742 153 21 6 chr10 88862409 88863078 -51453687 + L1PB4 LINE L1 5477 6155 -1 7846 262 46 27 chr10 88863078 88864932 -51451833 + L1ME1 LINE L1 4688 6505 -55 279 0 0 0 chr10 88864960 88864991 -51451774 + (A)n Simple_repeat Simple_repeat 1 31 0 5014 177 62 18 chr10 88864995 88866473 -51450292 + L1MC2 LINE L1 4798 6337 -7 867 348 138 24 chr10 88867512 88868626 -51448139 + L2 LINE L2 1811 3052 -220 301 240 0 19 chr10 88868826 88868930 -51447835 + GA-rich Low_complexity Low_complexity 4 105 0 713 327 85 21 chr10 88869112 88869500 -51447265 + MLT1J2 LTR MaLR 1 413 -37 23 68 0 0 chr10 88870147 88870191 -51446574 + AT_rich Low_complexity Low_complexity 1 44 0 217 277 15 0 chr10 88870605 88870670 -51446095 + (TA)n Simple_repeat Simple_repeat 1 66 0 632 302 93 26 chr10 88870955 88871375 -51445390 - L1ME3A LINE L1 -210 5952 5505 589 285 95 24 chr10 88871476 88871982 -51444783 - L1ME3A LINE L1 -743 5403 4862 307 220 160 10 chr10 88872317 88872417 -51444348 - LTR16A1 LTR ERVL 0 457 343 2360 120 3 11 chr10 88872417 88872784 -51443981 + L1PA16 LINE L1 5794 6157 -9 297 284 11 21 chr10 88872803 88872898 -51443867 - LTR16A1 LTR ERVL -308 149 56 280 250 40 59 chr10 88874052 88874204 -51442561 + L1ME3A LINE L1 313 461 -5658 860 300 68 16 chr10 88874512 88875332 -51441433 + L1ME3A LINE L1 3078 3940 -2189 787 285 52 36 chr10 88875580 88875966 -51440799 + L1ME3A LINE L1 5732 6123 -30 913 250 18 18 chr10 88876841 88877113 -51439652 + L1MEd LINE L1 2512 2783 -3346 3270 121 15 75 chr10 88877114 88877725 -51439040 + MER4B LTR ERV1 1 574 -36 3079 264 51 42 chr10 88877725 88878940 -51437825 + L1MEd LINE L1 2756 3991 -2138 189 0 0 0 chr10 88878940 88878961 -51437804 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 3079 264 51 42 chr10 88878961 88879304 -51437461 + L1MEd LINE L1 3991 4329 -1800 535 292 34 78 chr10 88879414 88879866 -51436899 - L1MEc LINE L1 -4372 2024 1606 201 39 0 0 chr10 88879866 88879892 -51436873 + (TG)n Simple_repeat Simple_repeat 1 26 0 535 292 34 78 chr10 88879892 88880065 -51436700 - L1MEc LINE L1 -4790 1606 1427 474 146 0 0 chr10 88880065 88880147 -51436618 + (TC)n Simple_repeat Simple_repeat 2 83 0 239 363 0 20 chr10 88880592 88880738 -51436027 + CT-rich Low_complexity Low_complexity 2 144 0 * 311 254 7 51 chr10 88880678 88880816 -51435949 + T-rich Low_complexity Low_complexity 5 136 0 303 323 19 12 chr10 88880866 88881027 -51435738 + CT-rich Low_complexity Low_complexity 1 162 0 396 138 0 0 chr10 88881325 88881390 -51435375 + (TC)n Simple_repeat Simple_repeat 2 66 0 491 322 44 40 chr10 88881649 88882078 -51434687 - L1MEc LINE L1 -5965 431 1 496 254 53 146 chr10 88882135 88883021 -51433744 - L1MC4a LINE L1 -126 7916 7113 3459 148 76 0 chr10 88883201 88883804 -51432961 - MER39B LTR ERV1 -4 649 1 365 235 25 0 chr10 88884986 88885067 -51431698 + MER81 DNA DNA 32 114 0 230 189 0 0 chr10 88885374 88885411 -51431354 - L1MA9 LINE L1 0 6312 6276 * 1046 163 22 0 chr10 88885405 88885583 -51431182 + L1MA7 LINE L1 5758 5939 -352 365 0 0 22 chr10 88885833 88885879 -51430886 + (CA)n Simple_repeat Simple_repeat 2 46 0 1134 23 47 12 chr10 88885896 88886068 -51430697 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 192 213 160 53 chr10 88886128 88886222 -51430543 + MIR3 SINE MIR 68 171 -37 314 104 0 42 chr10 88886967 88887015 -51429750 - U2 snRNA snRNA -142 46 1 181 333 35 18 chr10 88887043 88887157 -51429608 + L2 LINE L2 690 805 -2509 535 277 133 5 chr10 88887201 88887396 -51429369 - MIR SINE MIR -20 242 23 180 346 0 26 chr10 88887897 88887975 -51428790 + L2 LINE L2 1359 1434 -1880 261 311 26 26 chr10 88888294 88888445 -51428320 + L2 LINE L2 2110 2260 -1054 846 152 15 0 chr10 88888607 88888739 -51428026 + AluJo SINE Alu 1 134 -178 213 193 18 18 chr10 88888964 88889021 -51427744 + (TAA)n Simple_repeat Simple_repeat 3 59 0 822 331 103 47 chr10 88889203 88890600 -51426165 - L2 LINE L2 -373 2941 1466 1610 199 51 8 chr10 88890690 88891041 -51425724 + L1MD1 LINE L1 5877 6242 0 188 364 92 46 chr10 88891044 88891327 -51425438 - L2 LINE L2 -1944 1370 1075 297 180 0 4 chr10 88891545 88891608 -51425157 - MLT2D LTR ERVL -2 412 357 219 191 24 12 chr10 88891609 88891693 -51425072 + GA-rich Low_complexity Low_complexity 2 86 0 1650 188 36 31 chr10 88891704 88892060 -51424705 - MLT2D LTR ERVL -56 358 1 353 260 26 0 chr10 88892101 88892178 -51424587 + MER94 DNA DNA 55 133 -1 288 280 301 11 chr10 88893285 88893471 -51423294 + MIR SINE MIR 4 243 -19 991 244 15 0 chr10 88893537 88893742 -51423023 + MER63A DNA MER1_type 3 210 0 2338 180 124 72 chr10 88894820 88895539 -51421226 - LTR1B LTR ERV1 -63 957 1 2248 92 3 0 chr10 88895572 88895864 -51420901 + AluSp SINE Alu 21 313 0 6711 180 40 42 chr10 88896070 88897584 -51419181 + L1ME3A LINE L1 22 1533 -4893 2346 89 0 13 chr10 88897584 88897886 -51418879 + AluSc SINE Alu 1 298 -11 1485 274 77 8 chr10 88897892 88898477 -51418288 - L1MCa LINE L1 -3400 3026 2402 1039 153 62 14 chr10 88898488 88898697 -51418068 - L1MCa LINE L1 -4066 2360 2142 9682 210 67 18 chr10 88898826 88900008 -51416757 + L1ME3A LINE L1 1729 2851 -3773 2571 50 0 3 chr10 88900008 88900309 -51416456 - AluY SINE Alu -11 300 1 9682 210 67 18 chr10 88900309 88903202 -51413563 + L1ME3A LINE L1 2851 6008 -616 307 275 74 63 chr10 88903481 88903798 -51412967 + L1MC4a LINE L1 2288 2574 -3852 * 1440 259 107 22 chr10 88903791 88904927 -51411838 + L1MC4a LINE L1 4829 6103 -347 254 315 9 9 chr10 88905047 88905155 -51411610 + L1ME3A LINE L1 6326 6433 -17 203 233 0 23 chr10 88905236 88905279 -51411486 - L2 LINE L2 -21 3251 3210 2082 125 26 3 chr10 88905289 88905629 -51411136 - AluSq SINE Alu 0 347 1 275 266 0 0 chr10 88905683 88905747 -51411018 - MIR SINE MIR -121 141 78 198 300 0 17 chr10 88906107 88906167 -51410598 + MIR SINE MIR 87 145 -63 269 280 189 17 chr10 88906325 88906500 -51410265 + LTR33 LTR ERVL 90 294 -227 233 291 71 39 chr10 88907706 88907833 -51408932 - MIR SINE MIR -119 143 13 218 340 111 7 chr10 88909866 88910019 -51406746 + MIR SINE MIR 56 224 -38 35 41 0 0 chr10 88911406 88911455 -51405310 + AT_rich Low_complexity Low_complexity 1 49 0 36 0 0 0 chr10 88912854 88912890 -51403875 + AT_rich Low_complexity Low_complexity 1 36 0 234 0 0 0 chr10 88912961 88912987 -51403778 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 291 104 0 0 chr10 88912986 88913034 -51403731 + (CA)n Simple_repeat Simple_repeat 1 48 0 195 100 0 0 chr10 88915228 88915258 -51401507 + (TG)n Simple_repeat Simple_repeat 1 30 0 215 348 22 0 chr10 88916200 88916292 -51400473 - MIR SINE MIR -108 154 61 231 267 35 69 chr10 88920751 88920867 -51395898 - MIR SINE MIR -77 131 20 1723 140 42 36 chr10 88920874 88921182 -51395583 - AluJo SINE Alu -2 310 1 406 272 69 40 chr10 88921309 88921482 -51395283 + MER5B DNA MER1_type 1 178 0 204 234 0 47 chr10 88921587 88921651 -51395114 + MIR SINE MIR 186 246 -16 188 292 52 10 chr10 88922419 88922515 -51394250 - MIR SINE MIR -7 255 156 209 200 0 0 chr10 88923830 88923865 -51392900 + polypurine Low_complexity Low_complexity 3 37 0 198 71 0 0 chr10 88924255 88924283 -51392482 + (TC)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 88925801 88925823 -51390942 + AT_rich Low_complexity Low_complexity 1 22 0 237 321 31 47 chr10 88926819 88927012 -51389753 + L2 LINE L2 2622 2811 -503 401 271 42 42 chr10 88927464 88927608 -51389157 - MIR SINE MIR -33 229 86 253 310 14 41 chr10 88929035 88929180 -51387585 + MIR SINE MIR 120 260 -2 312 335 46 12 chr10 88929273 88929446 -51387319 - MIR SINE MIR -64 198 20 193 250 0 0 chr10 88929931 88929971 -51386794 + L2 LINE L2 3266 3305 -8 1806 154 42 7 chr10 88930303 88930588 -51386177 - AluSx SINE Alu -17 295 1 272 213 0 16 chr10 88931851 88931912 -51384853 + MIR SINE MIR 24 83 -125 298 311 76 0 chr10 88932540 88932659 -51384106 + L2 LINE L2 2986 3113 -159 463 382 6 0 chr10 88933793 88933971 -51382794 + (CA)n Simple_repeat Simple_repeat 2 180 0 709 174 14 58 chr10 88935468 88935606 -51381159 - FLAM_A SINE Alu -1 132 1 311 366 88 34 chr10 88937709 88938029 -51378736 + L1MB7 LINE L1 5472 5808 -2000 265 250 79 86 chr10 88939271 88939411 -51377354 - MIR SINE MIR -59 149 11 665 240 145 39 chr10 88939701 88939906 -51376859 - L1M4 LINE L1 -2686 3460 3278 1668 158 30 27 chr10 88939906 88940203 -51376562 - AluJb SINE Alu -14 298 1 665 240 145 39 chr10 88940203 88940356 -51376409 - L1M4 LINE L1 -2868 3278 3064 1149 195 0 9 chr10 88941131 88941341 -51375424 - AluJb SINE Alu -30 282 75 256 269 16 44 chr10 88941483 88941665 -51375100 + (TTTA)n Simple_repeat Simple_repeat 4 180 0 356 324 0 43 chr10 88941838 88942023 -51374742 + CT-rich Low_complexity Low_complexity 1 177 0 1171 229 36 13 chr10 88942605 88942915 -51373850 + L1MB7 LINE L1 5871 6184 0 21 36 0 0 chr10 88943160 88943188 -51373577 + AT_rich Low_complexity Low_complexity 1 28 0 1740 134 7 40 chr10 88944171 88944448 -51372317 + AluSx SINE Alu 14 281 -31 249 118 0 0 chr10 88944806 88944840 -51371925 + MER45A DNA AcHobo 79 112 -66 1162 173 14 34 chr10 88944840 88945048 -51371717 - AluJo SINE Alu -22 290 87 469 176 0 0 chr10 88945048 88945122 -51371643 + MER45A DNA AcHobo 105 178 0 194 259 185 44 chr10 88945183 88945318 -51371447 - L2 LINE L2 0 3313 3160 285 293 113 82 chr10 88946050 88946482 -51370283 + L2 LINE L2 2632 3090 -182 1118 172 0 16 chr10 88947109 88947301 -51369464 + AluSx SINE Alu 1 189 -123 190 305 76 80 chr10 88947370 88947672 -51369093 + L3 LINE CR1 1155 1455 -122 23 0 0 0 chr10 88948998 88949021 -51367744 + AT_rich Low_complexity Low_complexity 1 23 0 282 271 47 0 chr10 88949895 88949911 -51366854 - L1MA4A LINE L1 -3 6300 6285 5145 127 39 11 chr10 88949911 88950728 -51366037 - L1PB4 LINE L1 -7 6149 5310 342 307 73 7 chr10 88951177 88951314 -51365451 - ERVL LTR ERVL -3499 2265 2120 669 115 0 0 chr10 88951447 88951534 -51365231 + AluS SINE Alu 3 89 -224 890 26 163 7 chr10 88951534 88951687 -51365078 + LTR13 LTR ERVK 1 177 -830 317 239 54 0 chr10 88952093 88952185 -51364580 - THE1-int LTR MaLR -577 1003 907 875 239 79 18 chr10 88952189 88952469 -51364296 + MSTA LTR MaLR 76 372 -56 484 234 156 0 chr10 88952498 88952639 -51364126 - MST-int LTR MaLR -981 670 508 1175 274 9 9 chr10 88952642 88952974 -51363791 + MSTA-int LTR MaLR 32 363 -1288 241 259 89 62 chr10 88953922 88954034 -51362731 - MER5A DNA MER1_type 0 189 75 410 208 302 10 chr10 88954059 88954155 -51362610 + FLAM_A SINE Alu 1 124 -9 288 172 0 0 chr10 88955136 88955194 -51361571 + (TG)n Simple_repeat Simple_repeat 2 59 0 950 100 7 7 chr10 88956486 88956626 -51360139 + THE1C-int LTR MaLR 1441 1580 0 2868 90 5 16 chr10 88956626 88957005 -51359760 + THE1C LTR MaLR 1 375 0 1092 180 0 6 chr10 88957005 88957188 -51359577 - Tigger2 DNA MER2_type -257 2461 2280 386 284 74 23 chr10 88957711 88957916 -51358849 + L1ME2 LINE L1 5841 6061 -101 192 343 14 14 chr10 88959342 88959415 -51357350 + MIR3 SINE MIR 132 204 -4 862 229 11 11 chr10 88959424 88959599 -51357166 + MER5A DNA MER1_type 2 176 -13 24 0 0 0 chr10 88961120 88961144 -51355621 + AT_rich Low_complexity Low_complexity 1 24 0 2121 180 2 37 chr10 88961361 88961766 -51354999 - L1MC1 LINE L1 -49 6284 5894 471 243 230 0 chr10 88962732 88962880 -51353885 + MIR SINE MIR 73 254 -8 438 244 92 0 chr10 88963565 88963684 -51353081 - L2 LINE L2 -4 3309 3180 268 239 214 8 chr10 88964088 88964205 -51352560 - MST-int LTR MaLR -1004 647 507 * 306 199 17 2 chr10 88964201 88964277 -51352488 + MST-int LTR MaLR 27 103 -1477 810 237 79 62 chr10 88964399 88964703 -51352062 + MSTA LTR MaLR 75 385 -43 561 199 153 10 chr10 88964711 88964865 -51351900 - MST-int LTR MaLR -963 661 463 * 1165 214 8 4 chr10 88964860 88965126 -51351639 + MSTA-int LTR MaLR 28 294 -1357 2235 93 17 7 chr10 88965832 88966133 -51350632 - AluSq SINE Alu -9 304 1 845 170 0 0 chr10 88966148 88966289 -51350476 + FRAM SINE Alu 35 175 -1 1057 111 217 21 chr10 88966358 88966547 -51350218 - MER30 DNA MER1_type 0 230 5 253 256 13 26 chr10 88967798 88967876 -51348889 + MIR3 SINE MIR 9 85 -123 936 209 6 0 chr10 88968015 88968187 -51348578 + MER5A DNA MER1_type 17 189 0 3008 51 11 0 chr10 88968462 88968832 -51347933 + MER11C LTR ERVK 698 1071 0 1099 241 15 15 chr10 88969606 88969876 -51346889 - AluJo SINE Alu -37 275 6 1380 186 40 0 chr10 88970837 88971090 -51345675 + L1MA5 LINE L1 5679 5941 -359 1087 233 31 8 chr10 88971098 88971356 -51345409 + AluJo SINE Alu 1 264 -48 1293 170 80 0 chr10 88971423 88971699 -51345066 + L1MA5 LINE L1 5997 6294 -6 293 296 0 0 chr10 88971735 88971806 -51344959 + MLT1F1 LTR MaLR 79 149 -418 566 236 0 0 chr10 88972638 88972744 -51344021 + U6 snRNA snRNA 1 106 -1 633 206 0 0 chr10 88974943 88975040 -51341725 + FLAM_A SINE Alu 2 98 -44 22 70 0 0 chr10 88975049 88975092 -51341673 + AT_rich Low_complexity Low_complexity 1 43 0 841 149 26 45 chr10 88975298 88975422 -51341343 + AluSx SINE Alu 3 125 -187 216 0 0 0 chr10 88975422 88975446 -51341319 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 841 149 26 45 chr10 88975446 88975475 -51341290 + AluSx SINE Alu 125 153 -159 22 0 0 0 chr10 88977355 88977377 -51339388 + AT_rich Low_complexity Low_complexity 1 22 0 222 317 0 0 chr10 88978038 88978098 -51338667 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3445 128 22 0 chr10 88978740 88979232 -51337533 + L1PA10 LINE L1 5655 6157 -11 1782 161 25 0 chr10 88979638 88979917 -51336848 - AluSq SINE Alu -27 286 1 338 162 29 15 chr10 88980524 88980592 -51336173 - MER34C LTR ERV1 -94 491 423 937 90 90 0 chr10 88980849 88980982 -51335783 + AluSg SINE Alu 1 145 -165 744 181 0 9 chr10 88981111 88981227 -51335538 - FLAM_C SINE Alu -18 115 1 2699 193 54 9 chr10 88981593 88982131 -51334634 - MER68 LTR ERV1 0 562 1 1101 210 13 4 chr10 88983483 88983712 -51333053 + L1MB8 LINE L1 5653 5883 -295 413 230 10 0 chr10 88984096 88984196 -51332569 - L1MA9 LINE L1 -49 6263 6163 502 172 11 32 chr10 88985145 88985238 -51331527 - AluSg/x SINE Alu -17 292 202 270 311 57 52 chr10 88985793 88986126 -51330639 + L2 LINE L2 2745 3106 -166 24 53 0 0 chr10 88986598 88986636 -51330129 + AT_rich Low_complexity Low_complexity 1 38 0 2713 17 0 0 chr10 88986783 88987075 -51329690 - L1PA2 LINE L1 0 6155 5864 361 22 0 0 chr10 88987075 88987121 -51329644 + L1P LINE L1 5344 5389 -766 1947 135 7 13 chr10 88987807 88988111 -51328654 - AluSx SINE Alu -10 302 1 245 360 0 0 chr10 88988287 88988376 -51328389 + L2 LINE L2 2577 2665 -649 2047 121 3 7 chr10 88989946 88990244 -51326521 - AluSq SINE Alu -16 297 1 404 302 6 23 chr10 88990438 88990610 -51326155 + CT-rich Low_complexity Low_complexity 3 171 0 415 199 40 0 chr10 88990816 88990909 -51325856 - MSTA LTR MaLR -270 105 1 5816 231 57 25 chr10 88990909 88992478 -51324287 - MSTA-int LTR MaLR 0 1651 34 470 275 28 7 chr10 88992480 88992622 -51324143 + THE1-int LTR MaLR 464 608 -972 1236 252 55 60 chr10 88992774 88992914 -51323851 + MER21B LTR ERV1 291 430 -433 1361 167 18 106 chr10 88992914 88993243 -51323522 - AluJb SINE Alu -11 301 2 1236 252 55 60 chr10 88993243 88993321 -51323444 + MER21B LTR ERV1 430 507 -356 1828 158 3 10 chr10 88993321 88993612 -51323153 + AluJo SINE Alu 9 297 -15 1236 252 55 60 chr10 88993612 88993844 -51322921 + MER21B LTR ERV1 507 740 -123 1847 140 11 3 chr10 88994515 88994800 -51321965 + AluSx SINE Alu 5 291 -21 841 142 65 0 chr10 88995054 88995209 -51321556 - AluSq SINE Alu -147 166 2 2830 28 0 3 chr10 88995256 88995576 -51321189 + L1PA4 LINE L1 5834 6152 -3 281 171 60 0 chr10 88995597 88995714 -51321051 + (TA)n Simple_repeat Simple_repeat 2 125 0 1977 163 18 90 chr10 88995714 88996212 -51320553 + L1MA9 LINE L1 5774 6235 -77 318 214 0 0 chr10 88996220 88996276 -51320489 + L1M4 LINE L1 4879 4934 -1212 2096 88 7 14 chr10 88996276 88996561 -51320204 - THE1A LTR MaLR 0 355 73 1355 243 92 7 chr10 88996688 88997091 -51319674 - L1MC4a LINE L1 -660 7148 6712 1937 100 18 94 chr10 88997472 88997801 -51318964 - AluSq SINE Alu -9 304 1 184 287 58 58 chr10 88997997 88998084 -51318681 - MIR SINE MIR -17 245 159 196 335 88 44 chr10 88999424 88999651 -51317114 + MIR SINE MIR 20 256 -6 652 218 0 32 chr10 88999807 88999931 -51316834 + FLAM_A SINE Alu 6 125 -17 183 42 0 0 chr10 88999971 88999995 -51316770 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 732 160 39 26 chr10 89000378 89000534 -51316231 - MER21A LTR ERV1 -29 902 745 829 149 45 0 chr10 89000538 89000672 -51316093 + Tigger7 DNA MER2_type 2348 2487 0 587 218 0 0 chr10 89001911 89002012 -51314753 - AluJ/FLAM SINE Alu -210 102 2 1413 201 82 6 chr10 89002020 89002339 -51314426 - L1M3 LINE L1 -361 5822 5480 432 168 0 107 chr10 89002502 89002633 -51314132 + AluY SINE Alu 2 118 -193 815 194 37 0 chr10 89003139 89003330 -51313435 - L1M3 LINE L1 -1797 4349 4152 2193 155 19 8 chr10 89003340 89003715 -51313050 - L1PA15 LINE L1 -21 6144 5766 * 2967 230 81 20 chr10 89003711 89004577 -51312188 - L1M3 LINE L1 -1975 4171 3253 1488 231 60 11 chr10 89005518 89005869 -51310896 + MSTA LTR MaLR 1 368 -60 1294 170 22 0 chr10 89005898 89006128 -51310637 + MSTA-int LTR MaLR 13 247 -1404 1158 182 37 12 chr10 89006131 89006373 -51310392 + MSTA-int LTR MaLR 1404 1651 0 1501 230 32 27 chr10 89006373 89006747 -51310018 + MSTA LTR MaLR 1 376 -52 474 207 157 0 chr10 89006762 89006913 -51309852 - MST-int LTR MaLR -959 661 465 3710 170 84 8 chr10 89007111 89008128 -51308637 + L1M2 LINE L1 4642 5743 -557 1880 93 4 12 chr10 89008128 89008385 -51308380 - AluSg SINE Alu -12 298 44 3710 170 84 8 chr10 89008385 89008397 -51308368 + L1M2 LINE L1 5743 5753 -547 442 293 8 0 chr10 89008860 89008983 -51307782 - MIR SINE MIR -60 202 79 213 39 0 0 chr10 89009711 89009737 -51307028 + (A)n Simple_repeat Simple_repeat 1 26 0 306 211 42 0 chr10 89009969 89010040 -51306725 - MER5A DNA MER1_type 0 189 116 238 261 0 0 chr10 89010213 89010259 -51306506 - MER5A DNA MER1_type -85 104 59 274 309 43 36 chr10 89010382 89010521 -51306244 + MIR SINE MIR 12 151 -111 3700 80 110 5 chr10 89011704 89012269 -51304496 + MER11A LTR ERVK 1 624 -642 1236 284 70 32 chr10 89012563 89012672 -51304093 + MLT1J LTR MaLR 26 129 -382 2008 130 57 41 chr10 89012672 89013041 -51303724 + THE1C LTR MaLR 1 375 0 1236 284 70 32 chr10 89013041 89013399 -51303366 + MLT1J LTR MaLR 129 511 0 528 283 61 42 chr10 89013557 89013769 -51302996 + MLT1K LTR MaLR 372 587 -1 695 328 23 8 chr10 89014947 89015203 -51301562 + MIR SINE MIR 2 261 -1 2727 141 45 7 chr10 89016001 89016448 -51300317 - MER4C LTR ERV1 0 465 2 1522 104 4 70 chr10 89017785 89018026 -51298739 - AluSp SINE Alu -88 225 1 871 212 103 106 chr10 89018128 89018430 -51298335 - AluJo SINE Alu -1 301 1 1048 244 108 27 chr10 89018522 89019043 -51297722 + L2 LINE L2 2541 3097 -216 1299 221 30 17 chr10 89019047 89019345 -51297420 - AluJo SINE Alu -10 302 1 1461 187 31 61 chr10 89019354 89019713 -51297052 - MLT1D LTR MaLR -8 497 150 565 213 14 35 chr10 89019715 89019856 -51296909 + FLAM_C SINE Alu 6 143 0 1425 214 10 16 chr10 89019858 89020161 -51296604 + AluJo SINE Alu 1 301 -11 257 51 26 0 chr10 89020665 89020704 -51296061 + (CA)n Simple_repeat Simple_repeat 2 41 0 238 299 82 10 chr10 89020980 89021077 -51295688 - MIR SINE MIR -60 148 45 240 261 0 24 chr10 89023515 89023765 -51293000 + (CA)n Simple_repeat Simple_repeat 1 243 0 483 289 6 12 chr10 89023805 89023978 -51292787 + (CA)n Simple_repeat Simple_repeat 1 172 0 602 306 107 5 chr10 89024548 89024754 -51292011 - MIR SINE MIR -13 249 23 553 344 48 3 chr10 89024795 89025129 -51291636 - L1ME4a LINE L1 -267 5854 5506 224 307 105 26 chr10 89025579 89025693 -51291072 - MIR SINE MIR -65 143 21 288 77 0 0 chr10 89026404 89026443 -51290322 + (CA)n Simple_repeat Simple_repeat 2 40 0 264 277 157 0 chr10 89026456 89026539 -51290226 + L2 LINE L2 3177 3272 0 343 184 87 19 chr10 89026620 89026723 -51290042 + LTR33 LTR ERVL 14 123 -398 778 221 28 22 chr10 89026794 89026975 -51289790 - MER5A DNA MER1_type -5 184 3 1709 120 88 42 chr10 89026999 89027146 -51289619 - AluSx SINE Alu -15 297 158 2783 93 27 13 chr10 89027146 89027521 -51289244 - L1PA10 LINE L1 -2 6166 5787 1709 120 88 42 chr10 89027521 89027657 -51289108 - AluSx SINE Alu -154 158 1 280 319 159 12 chr10 89027670 89027833 -51288932 - MIR SINE MIR -74 188 2 963 187 12 0 chr10 89028690 89028861 -51287904 - AluSq SINE Alu -140 173 1 1746 127 41 20 chr10 89028889 89029181 -51287584 + AluSq SINE Alu 1 298 -15 387 0 0 0 chr10 89029245 89029288 -51287477 + (TC)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr10 89029287 89029311 -51287454 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 211 268 18 0 chr10 89029447 89029503 -51287262 + (TAA)n Simple_repeat Simple_repeat 1 57 0 333 0 0 0 chr10 89029996 89030033 -51286732 + (A)n Simple_repeat Simple_repeat 1 37 0 16118 43 7 2 chr10 89030719 89032707 -51284058 - L1P LINE L1 -2080 4066 2069 1823 36 5 0 chr10 89032703 89032923 -51283842 + L1P LINE L1 1826 2046 -4100 * 25 31 0 0 chr10 89032960 89032992 -51283773 + AT_rich Low_complexity Low_complexity 1 32 0 354 329 87 14 chr10 89033359 89033703 -51283062 - HAL1b LINE L1 -588 760 392 218 297 8 51 chr10 89033704 89033822 -51282943 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 89033737 89033904 -51282861 + CT-rich Low_complexity Low_complexity 1 160 0 358 325 12 12 chr10 89033920 89034086 -51282679 + CT-rich Low_complexity Low_complexity 3 168 0 388 248 51 8 chr10 89034570 89034687 -51282078 - L1M4c LINE L1 -4183 2201 2080 4350 199 31 21 chr10 89034900 89036601 -51280164 - L1MB3 LINE L1 -3 6180 4457 2283 73 0 0 chr10 89038135 89038410 -51278355 - AluY SINE Alu -16 295 21 10272 30 2 3 chr10 89038425 89040412 -51276353 - L1PA4 LINE L1 0 6155 4168 191 279 82 0 chr10 89040594 89040655 -51276110 + MIR SINE MIR 87 152 -56 183 184 0 0 chr10 89040951 89040989 -51275776 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 534 262 43 43 chr10 89041440 89041679 -51275086 + L1MC/D LINE L1 5575 5802 -331 900 225 35 21 chr10 89042555 89042844 -51273921 + L1ME2 LINE L1 2925 3217 -2929 * 1442 266 26 0 chr10 89042836 89043254 -51273511 + L1ME2 LINE L1 4504 4932 -1214 2311 265 47 23 chr10 89043254 89044169 -51272596 + L1ME2 LINE L1 5192 6132 -32 2323 88 10 0 chr10 89044220 89044515 -51272250 + AluSp SINE Alu 8 305 -8 328 210 119 85 chr10 89046196 89046372 -51270393 + MIR SINE MIR 68 249 -13 1110 216 28 0 chr10 89046699 89046917 -51269848 - MER58A DNA MER1_type 0 224 1 1189 279 97 11 chr10 89049118 89049732 -51267033 - L1ME LINE L1 -370 5800 5121 243 0 0 0 chr10 89050682 89050709 -51266056 + (TG)n Simple_repeat Simple_repeat 1 27 0 318 380 58 6 chr10 89052179 89052350 -51264415 - L2 LINE L2 -4 3268 3089 287 251 150 48 chr10 89052498 89052705 -51264060 - Charlie8 DNA MER1_type -2153 264 37 449 288 68 24 chr10 89053458 89053663 -51263102 + MIR SINE MIR 23 236 -26 306 257 46 9 chr10 89054713 89054822 -51261943 - 7SK RNA RNA -68 125 13 246 351 30 18 chr10 89055200 89055365 -51261400 - L2 LINE L2 -174 3098 2932 354 195 56 159 chr10 89057259 89057434 -51259331 - L2 LINE L2 -6 3307 3164 506 256 47 60 chr10 89057434 89057649 -51259116 - MER58C DNA MER1_type -3 212 1 354 195 56 159 chr10 89057649 89057724 -51259041 - L2 LINE L2 -149 3164 3083 1899 167 83 39 chr10 89057996 89058403 -51258362 + MSTC LTR MaLR 2 426 -2 205 146 0 42 chr10 89058750 89058798 -51257967 + (TAAAAA)n Simple_repeat Simple_repeat 2 47 0 311 336 119 25 chr10 89059598 89059916 -51256849 + L2 LINE L2 2924 3271 -1 2260 299 138 30 chr10 89059931 89061648 -51255117 + L2 LINE L2 1145 3092 -221 354 282 59 0 chr10 89061767 89061852 -51254913 + MER81 DNA DNA 3 92 -22 185 283 0 17 chr10 89061872 89061932 -51254833 + L2 LINE L2 3255 3313 0 366 348 11 17 chr10 89062753 89062934 -51253831 - MIR SINE MIR -36 226 47 293 245 53 11 chr10 89064210 89064304 -51252461 - MIR SINE MIR -43 219 122 503 279 76 43 chr10 89065234 89065466 -51251299 + MIR SINE MIR 7 262 0 251 232 0 0 chr10 89065716 89065772 -51250993 + MIR3 SINE MIR 149 204 -4 2276 169 51 11 chr10 89067224 89067673 -51249092 + MLT1C LTR MaLR 1 467 0 251 339 18 54 chr10 89067750 89067862 -51248903 + L2 LINE L2 3137 3244 -28 282 248 118 33 chr10 89068373 89068526 -51248239 - MIR SINE MIR -77 185 20 211 311 284 0 chr10 89068939 89069087 -51247678 + MIR SINE MIR 46 235 -27 180 231 0 0 chr10 89070310 89070349 -51246416 - MIR SINE MIR -119 143 105 244 288 90 49 chr10 89070838 89071126 -51245639 + L2 LINE L2 2290 2589 -725 532 288 6 0 chr10 89071398 89071561 -51245204 - MIR SINE MIR -83 179 16 349 328 8 0 chr10 89071567 89071689 -51245076 + L2 LINE L2 3150 3272 0 397 291 31 0 chr10 89072464 89072591 -51244174 - MIR3 SINE MIR -5 203 73 221 276 118 0 chr10 89073189 89073316 -51243449 - MIR SINE MIR -13 249 108 379 256 64 0 chr10 89074028 89074153 -51242612 - MER103 DNA DNA -12 154 22 14790 121 46 8 chr10 89075145 89075301 -51241464 + Tigger1 DNA MER2_type 30 179 -2239 186 43 0 0 chr10 89075301 89075324 -51241441 + (TTA)n Simple_repeat Simple_repeat 3 25 0 14790 121 46 8 chr10 89075324 89076242 -51240523 + Tigger1 DNA MER2_type 179 1060 -1358 2092 115 3 0 chr10 89076242 89076529 -51240236 - AluSc SINE Alu -21 288 1 14790 121 46 8 chr10 89076529 89077729 -51239036 + Tigger1 DNA MER2_type 1060 2393 -25 308 267 20 20 chr10 89078460 89078561 -51238204 - MIR SINE MIR -87 175 75 908 269 106 45 chr10 89080061 89080484 -51236281 + LTR16A1 LTR ERVL 1 449 -8 269 300 22 67 chr10 89083398 89083578 -51233187 - L2 LINE L2 -200 3072 2901 539 182 24 0 chr10 89084355 89084476 -51232289 + L1P5 LINE L1 5445 5572 -584 340 206 0 0 chr10 89085922 89085985 -51230780 + MER63 DNA MER1_type 703 765 -297 499 314 0 10 chr10 89087111 89087315 -51229450 + L1M4 LINE L1 3426 3627 -2519 484 291 67 12 chr10 89087315 89087480 -51229285 + MLT1J2 LTR MaLR 1 174 -276 1512 290 87 26 chr10 89087718 89088144 -51228621 + L1M4 LINE L1 3644 4043 -2103 1284 207 101 17 chr10 89088144 89088502 -51228263 - MLT1B LTR MaLR -2 388 1 1512 290 87 26 chr10 89088502 89089220 -51227545 + L1M4 LINE L1 4043 4873 -1273 314 276 65 22 chr10 89089293 89089478 -51227287 + L1ME LINE L1 4378 4570 -1576 286 176 20 0 chr10 89089716 89089767 -51226998 + L1MC3 LINE L1 6092 6143 -1642 * 377 270 63 52 chr10 89089759 89089933 -51226832 + L1ME LINE L1 5607 5782 -388 23 68 0 0 chr10 89090201 89090245 -51226520 + AT_rich Low_complexity Low_complexity 1 44 0 558 287 89 47 chr10 89090295 89090780 -51225985 + HAL1b LINE L1 674 1178 -170 926 184 0 0 chr10 89090936 89091104 -51225661 + FRAM SINE Alu 2 169 -7 604 200 0 0 chr10 89091844 89091959 -51224806 - FRAM SINE Alu -56 120 6 377 248 145 14 chr10 89092386 89092531 -51224234 - L3 LINE CR1 -697 880 717 654 348 61 55 chr10 89093720 89094211 -51222554 - L3 LINE CR1 -859 718 225 189 0 0 0 chr10 89094324 89094345 -51222420 + (CA)n Simple_repeat Simple_repeat 2 22 0 251 327 97 18 chr10 89094427 89094592 -51222173 - MIR SINE MIR -12 250 73 226 350 43 61 chr10 89095634 89095797 -51220968 - L2 LINE L2 -1 3271 3112 1720 173 3 16 chr10 89095835 89096147 -51220618 + AluJb SINE Alu 5 312 0 223 403 68 9 chr10 89096409 89096734 -51220031 - L2 LINE L2 -527 2787 2444 1148 200 30 0 chr10 89096750 89096985 -51219780 + L1MC2 LINE L1 5985 6226 -118 * 4946 165 33 12 chr10 89096981 89098006 -51218759 + L1PB4 LINE L1 4737 5796 -360 468 0 0 0 chr10 89098006 89098058 -51218707 + (TA)n Simple_repeat Simple_repeat 1 52 0 4946 165 33 12 chr10 89098058 89098426 -51218339 + L1PB4 LINE L1 5796 6155 -1 554 230 29 0 chr10 89098412 89098551 -51218214 + L1MC2 LINE L1 6202 6344 0 * 283 282 42 49 chr10 89099776 89099918 -51216847 - L3 LINE CR1 -148 1429 1289 436 333 91 35 chr10 89099936 89100342 -51216423 - L2 LINE L2 -4 3309 2881 1849 263 94 20 chr10 89100386 89101371 -51215394 - L1M4 LINE L1 -2868 3278 2221 237 367 0 0 chr10 89101533 89101612 -51215153 - L3 LINE CR1 -739 838 760 206 295 279 8 chr10 89101642 89101771 -51214994 - MER5A DNA MER1_type 0 189 26 237 366 37 19 chr10 89102110 89102271 -51214494 - L3 LINE CR1 -997 580 417 2829 169 41 61 chr10 89102280 89102883 -51213882 - L1MC2 LINE L1 -464 5880 5296 2073 138 0 3 chr10 89102883 89103195 -51213570 - AluSx SINE Alu -1 311 1 2829 169 41 61 chr10 89103195 89103432 -51213333 - L1MC2 LINE L1 -1048 5296 5056 23 33 0 0 chr10 89103447 89103477 -51213288 + AT_rich Low_complexity Low_complexity 1 30 0 817 286 52 0 chr10 89103983 89104231 -51212534 - MIR SINE MIR -1 261 1 1539 128 51 0 chr10 89105543 89105800 -51210965 + L1PB1 LINE L1 5866 6135 -16 420 71 0 0 chr10 89156569 89156625 -51160140 + (TC)n Simple_repeat Simple_repeat 1 56 0 235 315 0 0 chr10 89156625 89156717 -51160048 + (CA)n Simple_repeat Simple_repeat 2 93 0 25 0 0 0 chr10 89157710 89157735 -51159030 + AT_rich Low_complexity Low_complexity 1 25 0 424 333 70 32 chr10 89157902 89158244 -51158521 + L2 LINE L2 2586 2940 -374 318 320 30 10 chr10 89158454 89158554 -51158211 + L2 LINE L2 3204 3305 -8 256 253 14 58 chr10 89158787 89159067 -51157698 + CT-rich Low_complexity Low_complexity 1 267 0 203 191 32 11 chr10 89159102 89159196 -51157569 + C-rich Low_complexity Low_complexity 2 97 0 22 0 0 0 chr10 89159544 89159566 -51157199 + AT_rich Low_complexity Low_complexity 1 22 0 1333 116 10 5 chr10 89159568 89159766 -51156999 - L1PA16 LINE L1 -9 6157 5959 7945 28 0 0 chr10 89159779 89161263 -51155502 - L1PA3 LINE L1 -3 6152 4678 195 129 0 0 chr10 89161283 89161314 -51155451 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 329 280 49 76 chr10 89161334 89161441 -51155324 - L1ME1 LINE L1 -102 6064 5956 2403 100 3 0 chr10 89161441 89161751 -51155014 - AluSx SINE Alu -1 311 1 329 280 49 76 chr10 89161751 89161907 -51154858 - L1ME1 LINE L1 -210 5956 5808 7871 44 0 1 chr10 89162009 89163183 -51153582 + L1PA5 LINE L1 4987 6154 0 359 231 22 0 chr10 89163227 89163318 -51153447 + L1MB8 LINE L1 6086 6178 0 343 308 89 56 chr10 89163354 89163993 -51152772 + L1MEc LINE L1 1103 1697 -4518 1327 116 0 79 chr10 89164161 89164408 -51152357 - AluSg/x SINE Alu 0 316 87 14868 38 2 18 chr10 89164555 89166445 -51150320 - L1P LINE L1 -1226 4920 3062 275 237 44 18 chr10 89167179 89167293 -51149472 + (TCTCTG)n Simple_repeat Simple_repeat 6 122 0 234 302 0 0 chr10 89167502 89167555 -51149210 - MER58 DNA MER1_type -2367 53 1 597 234 24 5 chr10 89167806 89168018 -51148747 + MLT1H1 LTR MaLR 1 209 -381 993 139 13 126 chr10 89168018 89168248 -51148517 - MER20 DNA MER1_type 0 219 16 1101 246 95 12 chr10 89168276 89168601 -51148164 + MLT1H1 LTR MaLR 202 553 -2 495 139 13 0 chr10 89168792 89168871 -51147894 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr10 89169130 89169151 -51147614 + AT_rich Low_complexity Low_complexity 1 21 0 250 32 0 0 chr10 89169519 89169550 -51147215 + L1PA2 LINE L1 4802 4832 -1314 8069 24 0 7 chr10 89169882 89171024 -51145741 + L1PA2 LINE L1 5018 6155 0 1053 257 123 68 chr10 89171639 89172189 -51144576 + MLT1H1 LTR MaLR 3 548 -7 260 274 43 63 chr10 89172313 89172497 -51144268 - MIR SINE MIR -50 212 27 247 299 75 56 chr10 89173810 89173917 -51142848 + MIR SINE MIR 23 131 -131 21 36 0 0 chr10 89173995 89174023 -51142742 + AT_rich Low_complexity Low_complexity 1 28 0 312 294 126 0 chr10 89174466 89174585 -51142180 + L2 LINE L2 2526 2659 -655 402 273 137 43 chr10 89174629 89174929 -51141836 + MLT1J1 LTR MaLR 66 393 -53 739 309 98 43 chr10 89174964 89175576 -51141189 + L2 LINE L2 2670 3311 -2 457 253 118 68 chr10 89175938 89176440 -51140325 + L1ME4a LINE L1 5347 5873 -248 33 56 0 0 chr10 89177220 89177274 -51139491 + AT_rich Low_complexity Low_complexity 1 54 0 371 239 62 0 chr10 89177847 89177977 -51138788 - Charlie7 DNA MER1_type -41 2571 2434 1155 287 45 22 chr10 89177979 89178487 -51138278 - Charlie7 DNA MER1_type -1890 722 203 838 243 157 0 chr10 89178490 89178770 -51137995 + MER5C DNA MER1_type 1 324 0 2525 183 29 113 chr10 89178816 89179429 -51137336 - REP3 LTR ERV 0 562 1 350 206 19 19 chr10 89179430 89179537 -51137228 - Charlie7 DNA MER1_type -2448 164 58 203 280 67 0 chr10 89179736 89179811 -51136954 - L2 LINE L2 0 3313 3234 467 315 118 17 chr10 89180180 89180418 -51136347 + MIR SINE MIR 1 262 0 198 269 103 69 chr10 89180450 89180595 -51136170 - L3 LINE CR1 -279 1298 1149 645 229 251 37 chr10 89180662 89181064 -51135701 - MLT1H LTR MaLR -4 545 58 746 230 25 0 chr10 89182836 89182997 -51133768 - MER5B DNA MER1_type -9 169 5 456 219 0 0 chr10 89183184 89183266 -51133499 - MER81 DNA DNA -29 85 4 256 246 14 43 chr10 89183953 89184022 -51132743 - L2 LINE L2 -65 3207 3141 208 280 220 34 chr10 89184218 89184336 -51132429 + MIR SINE MIR 22 161 -101 408 257 115 11 chr10 89185910 89186093 -51130672 + MIR SINE MIR 57 258 -4 423 239 130 87 chr10 89186121 89186351 -51130414 + MIR SINE MIR 22 261 -1 331 331 59 83 chr10 89187117 89187371 -51129394 - MIR SINE MIR -6 256 9 207 139 0 0 chr10 89187675 89187711 -51129054 + (CA)n Simple_repeat Simple_repeat 1 36 0 713 295 203 8 chr10 89187838 89188260 -51128505 - L2 LINE L2 -1 3312 2786 472 254 101 6 chr10 89190309 89190478 -51126287 + MLT1J2 LTR MaLR 21 205 -245 601 150 22 22 chr10 89191322 89191502 -51125263 + (CA)n Simple_repeat Simple_repeat 1 180 0 192 152 22 43 chr10 89192542 89192588 -51124177 + MIR SINE MIR 84 128 -134 209 360 136 0 chr10 89193463 89193508 -51123257 + L2 LINE L2 3125 3163 -109 195 42 0 0 chr10 89193508 89193532 -51123233 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 209 360 136 0 chr10 89193532 89193611 -51123154 + L2 LINE L2 3163 3266 -6 227 321 43 70 chr10 89193790 89193977 -51122788 + L2 LINE L2 3080 3261 -11 23 33 0 0 chr10 89194636 89194666 -51122099 + AT_rich Low_complexity Low_complexity 1 30 0 277 287 23 11 chr10 89195733 89195820 -51120945 + L2 LINE L2 3209 3296 -17 447 222 89 22 chr10 89199440 89199575 -51117190 + MER103 DNA DNA 11 154 -12 293 295 90 0 chr10 89199677 89199799 -51116966 - L3 LINE CR1 -723 854 722 295 266 0 13 chr10 89200977 89201056 -51115709 - MER103 DNA DNA -78 88 11 405 211 70 99 chr10 89202266 89202437 -51114328 + HAL1 LINE L1 1488 1653 -854 1809 174 61 121 chr10 89202774 89202957 -51113808 - L1PA14 LINE L1 0 6161 5969 2081 108 3 63 chr10 89202957 89203290 -51113475 - AluSp SINE Alu 0 313 1 1809 174 61 121 chr10 89203290 89203726 -51113039 - L1PA14 LINE L1 -192 5969 5579 3614 172 43 5 chr10 89203915 89204921 -51111844 - L1MA6 LINE L1 -649 5651 4613 3737 148 17 25 chr10 89204921 89205560 -51111205 + L1MA6 LINE L1 5662 6300 0 415 253 89 78 chr10 89205906 89206175 -51110590 + L1M4 LINE L1 2778 3049 -3097 756 244 117 0 chr10 89206257 89206470 -51110295 - MIR SINE MIR -5 257 20 532 283 88 49 chr10 89206477 89206806 -51109959 + L1M4 LINE L1 3174 3515 -2631 1011 290 106 35 chr10 89207076 89208177 -51108588 + L1M4 LINE L1 3868 5046 -1100 401 271 54 30 chr10 89208151 89208354 -51108411 + L1MEc LINE L1 9 216 -6180 * 432 0 0 0 chr10 89208379 89208427 -51108338 + (CA)n Simple_repeat Simple_repeat 2 49 0 437 56 0 0 chr10 89208450 89208504 -51108261 + L1MA2 LINE L1 5920 5973 -331 704 87 16 16 chr10 89208593 89208720 -51108045 + L1MA2 LINE L1 5973 6099 -205 3370 153 17 50 chr10 89208955 89209617 -51107148 - Tigger7 DNA MER2_type -1847 640 1 518 242 23 8 chr10 89209682 89209814 -51106951 - MIR SINE MIR -32 230 97 217 322 175 6 chr10 89210555 89210726 -51106039 + MIR SINE MIR 54 253 -9 350 314 29 7 chr10 89210900 89211037 -51105728 + MIR SINE MIR 3 142 -120 884 262 96 72 chr10 89211050 89211571 -51105194 - MLT1G1 LTR MaLR -2 593 20 196 298 0 0 chr10 89211593 89211650 -51105115 + MIR SINE MIR 156 212 -50 704 237 0 40 chr10 89211763 89211915 -51104850 + MIR SINE MIR 93 238 -24 258 262 0 0 chr10 89213063 89213124 -51103641 + MER116 DNA Mariner 18 78 -2 185 279 0 0 chr10 89213131 89213174 -51103591 + MIR SINE MIR 220 262 0 217 311 39 19 chr10 89213202 89213305 -51103460 + MIR SINE MIR 128 232 -30 418 296 146 41 chr10 89214243 89214510 -51102255 - L2 LINE L2 -2 3270 2976 521 237 30 59 chr10 89217856 89218087 -51098678 - MIR SINE MIR -4 258 34 1163 260 130 29 chr10 89218127 89218265 -51098500 + MER69 DNA AcHobo 1 124 -2402 2489 128 8 0 chr10 89218265 89218623 -51098142 + MER46B DNA MER2_type 1 236 0 1163 260 130 29 chr10 89218623 89219000 -51097765 + MER69 DNA AcHobo 124 568 -1958 980 200 61 41 chr10 89218998 89219054 -51097711 + MER69 DNA AcHobo 2010 2063 -463 * 1723 190 3 0 chr10 89219054 89219343 -51097422 + AluJb SINE Alu 1 290 -22 980 200 61 41 chr10 89219343 89219581 -51097184 + MER69 DNA AcHobo 2063 2310 -216 375 23 0 0 chr10 89219581 89219625 -51097140 + (TG)n Simple_repeat Simple_repeat 1 44 0 604 225 46 40 chr10 89219627 89219800 -51096965 + MER69 DNA AcHobo 2350 2523 -3 385 276 6 49 chr10 89221032 89221195 -51095570 + L1MC4a LINE L1 4903 5058 -1088 1227 283 25 73 chr10 89221360 89222004 -51094761 + L1MC4a LINE L1 5266 5807 -314 1277 108 0 6 chr10 89222007 89222183 -51094582 + L1PA16 LINE L1 5792 5966 -200 25817 46 2 2 chr10 89222191 89225325 -51091440 + L1P LINE L1 7 3140 -3006 4214 116 25 5 chr10 89225501 89226243 -51090522 - L1PB3 LINE L1 -248 5906 5149 337 274 112 51 chr10 89226587 89226750 -51090015 + L1MD2 LINE L1 2102 2280 -4116 1933 97 9 44 chr10 89226750 89227070 -51089695 + AluSx SINE Alu 1 309 -3 337 274 112 51 chr10 89227070 89227103 -51089662 + L1MD2 LINE L1 2280 2310 -4086 4817 198 25 33 chr10 89227306 89228332 -51088433 + L1PA15 LINE L1 1224 2241 -4546 13626 209 42 10 chr10 89228332 89232167 -51084598 + L1PA15 LINE L1 2968 6815 -1 840 267 192 45 chr10 89232204 89233239 -51083526 + L1MD2 LINE L1 2739 3925 -2290 3459 243 69 19 chr10 89233244 89236016 -51080749 + L1ME3A LINE L1 17 2935 -3471 2450 125 25 14 chr10 89236016 89236376 -51080389 + THE1B LTR MaLR 1 364 0 3459 243 69 19 chr10 89236376 89236957 -51079808 + L1ME3A LINE L1 2935 3485 -2921 9435 201 40 8 chr10 89236968 89241044 -51075721 + L1PA13 LINE L1 1 4366 -2431 7776 170 24 1 chr10 89241046 89243198 -51073567 + L1PA13 LINE L1 4639 6810 -4 1127 262 38 61 chr10 89243198 89243771 -51072994 + L1ME3A LINE L1 3478 4037 -2369 4174 208 55 34 chr10 89243778 89245136 -51071629 + L1MD2 LINE L1 4825 6230 -198 423 0 0 0 chr10 89245136 89245183 -51071582 + (CA)n Simple_repeat Simple_repeat 2 48 0 4174 208 55 34 chr10 89245183 89245384 -51071381 + L1MD2 LINE L1 6230 6425 -3 1966 268 62 12 chr10 89245515 89246336 -51070429 + L1ME3A LINE L1 4107 4968 -1438 693 158 188 24 chr10 89246336 89246501 -51070264 + MER74A LTR ERVL 366 557 -1 1012 270 39 6 chr10 89246506 89246836 -51069929 + L1ME3A LINE L1 6077 6417 -13 1661 193 33 0 chr10 89246968 89247268 -51069497 + AluSx SINE Alu 1 310 -2 351 285 75 43 chr10 89247287 89247568 -51069197 + L1ME4a LINE L1 3162 3451 -2695 633 289 122 39 chr10 89247861 89248173 -51068592 + MLT1L LTR MaLR 258 595 -20 755 308 65 41 chr10 89248717 89249452 -51067313 + L1ME4a LINE L1 5347 6099 -22 274 229 138 46 chr10 89255561 89255670 -51061095 - L2 LINE L2 -2 3270 3152 187 207 155 0 chr10 89255797 89255855 -51060910 + MIR SINE MIR 37 103 -159 192 183 127 42 chr10 89256491 89256562 -51060203 + MIR SINE MIR 93 169 -93 787 268 50 0 chr10 89257343 89257541 -51059224 - MER58A DNA MER1_type -16 208 1 183 291 18 18 chr10 89259907 89259962 -51056803 + L2 LINE L2 3203 3257 -15 864 156 0 0 chr10 89259999 89260179 -51056586 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 301 309 12 0 chr10 89261419 89261503 -51055262 + L2 LINE L2 3228 3312 -1 210 211 0 0 chr10 89261667 89261705 -51055060 - MIR SINE MIR -29 233 196 1906 183 42 22 chr10 89263813 89264169 -51052596 - MLT1A1 LTR MaLR 0 365 3 393 75 0 0 chr10 89266619 89266672 -51050093 + (TA)n Simple_repeat Simple_repeat 1 53 0 387 0 0 0 chr10 89266673 89266716 -51050049 + (GA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr10 89267021 89267041 -51049724 + (A)n Simple_repeat Simple_repeat 1 20 0 1295 158 12 46 chr10 89267108 89267348 -51049417 - MER46A DNA MER2_type -1 235 4 384 316 53 37 chr10 89267361 89267551 -51049214 - MIR SINE MIR -35 227 35 12300 32 3 0 chr10 89269655 89271819 -51044946 + L1PA4 LINE L1 3981 6147 -8 1032 242 56 50 chr10 89271965 89272502 -51044263 - L1MEd LINE L1 -4862 1257 718 539 71 30 10 chr10 89272524 89272623 -51044142 + (TC)n Simple_repeat Simple_repeat 2 102 0 386 336 98 55 chr10 89272854 89273291 -51043474 - L1MEd LINE L1 -5642 477 22 185 270 0 0 chr10 89273745 89273782 -51042983 - L2 LINE L2 -708 2606 2570 265 314 23 40 chr10 89275324 89275499 -51041266 + MLT1L LTR MaLR 444 615 0 21 36 0 0 chr10 89275895 89275923 -51040842 + AT_rich Low_complexity Low_complexity 1 28 0 691 227 147 6 chr10 89276485 89276648 -51040117 + MER5A DNA MER1_type 4 189 0 352 293 129 7 chr10 89276662 89276809 -51039956 + MIR SINE MIR 9 173 -89 297 382 0 7 chr10 89277723 89277867 -51038898 + CT-rich Low_complexity Low_complexity 5 147 0 3808 123 11 33 chr10 89278341 89278953 -51037812 - L1MA6 LINE L1 -258 6042 5445 1592 125 25 0 chr10 89278953 89279193 -51037572 - L1MA5A LINE L1 -3 6294 6049 3808 123 11 33 chr10 89279193 89279241 -51037524 - L1MA6 LINE L1 -855 5445 5397 1494 127 12 24 chr10 89279241 89279492 -51037273 + L1MA6 LINE L1 6052 6300 0 188 257 14 0 chr10 89279769 89279839 -51036926 + GA-rich Low_complexity Low_complexity 2 72 0 409 184 58 10 chr10 89280510 89280613 -51036152 + L1ME1 LINE L1 47 154 -6242 1780 228 42 68 chr10 89280699 89281431 -51035334 + L1ME1 LINE L1 625 1337 -5059 232 279 109 36 chr10 89281433 89281680 -51035085 + L1ME1 LINE L1 1413 1677 -4719 3839 236 42 41 chr10 89281687 89282915 -51033850 + L1ME1 LINE L1 3504 4732 -1483 421 205 12 0 chr10 89282934 89283017 -51033748 - MER96 DNA MER1_type? -91 84 1 811 267 46 72 chr10 89283017 89283362 -51033403 + L1ME1 LINE L1 4723 5058 -1157 * 878 226 76 45 chr10 89283352 89283687 -51033078 + L1ME1 LINE L1 5884 6231 -2 1980 134 20 3 chr10 89283769 89284061 -51032704 + AluSx SINE Alu 1 297 -15 222 37 0 0 chr10 89284061 89284088 -51032677 + (TA)n Simple_repeat Simple_repeat 1 27 0 704 272 81 28 chr10 89284200 89284483 -51032282 + L2 LINE L2 2496 2793 -521 319 325 118 18 chr10 89285419 89285588 -51031177 + MIR SINE MIR 2 187 -75 246 304 61 54 chr10 89285613 89285761 -51031004 + L1ME4a LINE L1 5327 5475 -646 679 266 52 4 chr10 89285892 89286125 -51030640 + L1ME4a LINE L1 5677 5920 -201 24 32 0 0 chr10 89286177 89286208 -51030557 + AT_rich Low_complexity Low_complexity 1 31 0 1774 135 62 24 chr10 89286660 89287001 -51029764 - L1MA8 LINE L1 -13 6278 5925 7329 142 42 5 chr10 89287002 89288184 -51028581 - Tigger3b DNA MER2_type 0 1231 7 2076 119 13 0 chr10 89288190 89288492 -51028273 - L1MA8 LINE L1 -366 5925 5620 251 288 0 0 chr10 89288638 89288697 -51028068 + MIR SINE MIR 189 247 -15 235 315 140 42 chr10 89289728 89289871 -51026894 + L2 LINE L2 3111 3267 -5 2039 60 0 12 chr10 89290239 89290554 -51026211 - AluY SINE Alu 0 348 37 477 329 60 17 chr10 89290564 89290798 -51025967 - MIR SINE MIR -13 249 6 1423 214 28 33 chr10 89291165 89291525 -51025240 - Tigger7 DNA MER2_type -1 2490 1 221 208 338 0 chr10 89291725 89291802 -51024963 + MIR SINE MIR 54 156 -106 2718 258 47 47 chr10 89291866 89293008 -51023757 + L2 LINE L2 1955 3091 -222 210 330 74 40 chr10 89293007 89293183 -51023582 + L2 LINE L2 3042 3223 -90 * 1197 255 21 28 chr10 89293225 89293613 -51023152 + L1ME1 LINE L1 51 435 -5961 * 8603 247 39 29 chr10 89293609 89296153 -51020612 + L1ME1 LINE L1 883 3445 -2770 2093 139 7 0 chr10 89296153 89296462 -51020303 - AluSx SINE Alu -1 311 1 8603 247 39 29 chr10 89296462 89297927 -51018838 + L1ME1 LINE L1 3445 4894 -1321 2936 219 57 37 chr10 89297931 89298977 -51017788 + L1ME1 LINE L1 5158 6230 -5 323 307 37 75 chr10 89300249 89300490 -51016275 - L2 LINE L2 -865 2449 2218 242 281 78 0 chr10 89301163 89301227 -51015538 - L2 LINE L2 -57 3215 3147 761 238 61 9 chr10 89302344 89302558 -51014207 + MIR SINE MIR 32 256 -6 2185 122 3 3 chr10 89302558 89302870 -51013895 + AluSx SINE Alu 1 312 0 418 246 6 6 chr10 89304258 89304437 -51012328 + (CA)n Simple_repeat Simple_repeat 2 180 0 467 249 0 6 chr10 89304486 89304667 -51012098 + (CA)n Simple_repeat Simple_repeat 1 180 0 309 139 23 12 chr10 89304685 89304771 -51011994 + (CA)n Simple_repeat Simple_repeat 1 87 0 241 257 57 122 chr10 89305825 89306070 -51010695 + L2 LINE L2 3084 3312 -1 222 325 205 21 chr10 89307142 89307376 -51009389 + L3 LINE CR1 639 915 -662 633 302 136 8 chr10 89307611 89307869 -51008896 + L3 LINE CR1 1179 1469 -108 315 350 15 15 chr10 89307957 89308094 -51008671 - MER5B DNA MER1_type 0 178 42 401 286 45 23 chr10 89308752 89308885 -51007880 + MIR3 SINE MIR 4 139 -69 191 231 77 0 chr10 89309317 89309369 -51007396 + MIR SINE MIR 157 212 -50 402 322 30 20 chr10 89310980 89311168 -51005597 - MIR SINE MIR -68 140 4 301 351 14 0 chr10 89312553 89312738 -51004027 - MIR SINE MIR -3 259 71 238 281 99 25 chr10 89313050 89313171 -51003594 + L2 LINE L2 3143 3272 0 3588 246 87 50 chr10 89316792 89319550 -50997215 + L1ME2 LINE L1 3290 6154 -10 2172 143 0 9 chr10 89319674 89319989 -50996776 + AluSx SINE Alu 1 312 0 509 308 62 40 chr10 89320105 89320505 -50996260 + L1ME LINE L1 5260 5668 -502 599 324 78 93 chr10 89320717 89322132 -50994633 + L1MEc LINE L1 110 1503 -4893 3799 290 44 36 chr10 89322173 89324039 -50992726 + L1M2c LINE L1 4 1745 -5044 4181 269 36 27 chr10 89324063 89324437 -50992328 + L1MEc LINE L1 1514 1883 -2330 2344 77 0 10 chr10 89324437 89324737 -50992028 + AluY SINE Alu 2 298 -13 4181 269 36 27 chr10 89324737 89326251 -50990514 + L1MEc LINE L1 1883 3352 -861 847 243 78 12 chr10 89326351 89326594 -50990171 + L1M2c LINE L1 350 608 -6181 6644 229 53 19 chr10 89326594 89328771 -50987994 + L1M2c LINE L1 461 2665 -4124 315 318 19 19 chr10 89329006 89329160 -50987605 + L1MC3 LINE L1 463 616 -5914 224 89 0 67 chr10 89329178 89329223 -50987542 + (TC)n Simple_repeat Simple_repeat 1 42 0 243 203 0 0 chr10 89329243 89329302 -50987463 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 227 254 0 45 chr10 89329303 89329370 -50987395 + L1MC3 LINE L1 6609 6672 -1113 1506 254 88 55 chr10 89329452 89330661 -50986104 + L1MC3 LINE L1 1403 2650 -3890 4281 220 62 32 chr10 89330667 89332027 -50984738 + L1MC3 LINE L1 3305 4704 -1836 750 184 100 53 chr10 89332009 89332330 -50984435 + L1MC3 LINE L1 5364 5699 -841 * 2593 230 27 45 chr10 89332339 89333122 -50983643 + L1MC3 LINE L1 5776 6544 -1635 3867 125 9 11 chr10 89333147 89333713 -50983052 - L1PA15 LINE L1 -9 6156 5592 979 141 12 0 chr10 89333823 89333986 -50982779 - L1P4 LINE L1 -402 5759 5595 1680 168 7 7 chr10 89333986 89334271 -50982494 + AluJo SINE Alu 19 303 -9 1272 245 70 18 chr10 89334285 89334334 -50982431 + L1MC4a LINE L1 6205 6250 -1558 2286 99 3 0 chr10 89334334 89334628 -50982137 + AluSg SINE Alu 1 295 -15 1272 245 70 18 chr10 89334628 89335049 -50981716 + L1MC4a LINE L1 6250 6620 -1188 2380 229 36 43 chr10 89335088 89335448 -50981317 + L1MD3 LINE L1 6617 6971 -1024 1987 129 7 10 chr10 89335448 89335742 -50981023 - AluSx SINE Alu -18 294 2 2380 229 36 43 chr10 89335742 89336049 -50980716 + L1MD3 LINE L1 6971 7279 -716 373 280 8 53 chr10 89336049 89336181 -50980584 + MLT1F1 LTR MaLR 5 130 -437 985 126 120 0 chr10 89336183 89336350 -50980415 + L1MD3 LINE L1 7415 7601 -394 583 192 40 60 chr10 89336350 89336501 -50980264 + AluSq/x SINE Alu 2 149 -164 2028 150 53 3 chr10 89337152 89337492 -50979273 - MER47A DNA MER2_type 0 366 10 509 278 83 20 chr10 89339852 89340154 -50976611 - L1ME LINE L1 -595 5644 5324 2148 105 6 40 chr10 89340413 89340736 -50976029 - AluSx SINE Alu 0 312 1 496 296 64 7 chr10 89340795 89341075 -50975690 - L1ME LINE L1 -3736 2479 2184 493 281 111 5 chr10 89341466 89341665 -50975100 - L1ME LINE L1 -4645 1751 1532 1832 226 77 29 chr10 89341673 89342155 -50974610 - MLT1D LTR MaLR 0 505 1 19806 48 1 7 chr10 89342177 89344612 -50972153 + L1PA5 LINE L1 2 2420 -3726 24430 33 0 0 chr10 89344712 89348262 -50968503 + L1PA5 LINE L1 2605 6154 0 219 322 0 0 chr10 89350123 89350193 -50966572 - MIR SINE MIR -82 126 57 482 213 0 0 chr10 89351453 89351528 -50965237 - Tigger2a DNA MER2_type 0 434 360 2353 54 30 0 chr10 89351528 89351823 -50964942 - L1PA13 LINE L1 -82 6081 5778 1841 174 52 25 chr10 89351840 89352203 -50964562 - Tigger2a DNA MER2_type -61 373 1 308 271 60 38 chr10 89352930 89353063 -50963702 - LTR16A1 LTR ERVL -3 454 319 638 245 87 15 chr10 89355271 89355467 -50961298 - MIR SINE MIR -6 256 47 1565 193 51 98 chr10 89356147 89356626 -50960139 - MLT1D LTR MaLR 0 505 52 2272 105 0 10 chr10 89356626 89356930 -50959835 + AluSx SINE Alu 1 301 -11 1565 193 51 98 chr10 89356930 89356980 -50959785 - MLT1D LTR MaLR -453 52 1 492 241 39 1 chr10 89357970 89358101 -50958664 + MIR SINE MIR 38 171 -70 555 242 55 87 chr10 89358121 89358410 -50958355 + L1ME4a LINE L1 5825 6104 -17 376 234 89 40 chr10 89359901 89360025 -50956740 - L1ME LINE L1 -381 5740 5611 397 259 46 0 chr10 89360380 89360488 -50956277 + MER8 DNA MER2_type 6 118 -121 306 156 0 0 chr10 89360479 89360524 -50956241 - Tigger2a DNA MER2_type -388 46 2 * 1487 221 67 40 chr10 89360846 89361295 -50955470 + MLT1H LTR MaLR 82 542 -7 440 319 148 7 chr10 89361297 89361607 -50955158 + L1MC/D LINE L1 5363 5716 -2092 2402 229 55 88 chr10 89362100 89363293 -50953472 - Charlie7 DNA MER1_type -32 2580 1428 307 188 211 15 chr10 89363387 89363520 -50953245 - Charlie7 DNA MER1_type -2453 159 1 22 0 0 0 chr10 89364427 89364449 -50952316 + AT_rich Low_complexity Low_complexity 1 22 0 1026 170 56 70 chr10 89365025 89365295 -50951470 + L1MD3 LINE L1 7730 7995 0 659 303 72 22 chr10 89365960 89366805 -50949960 - HAL1 LINE L1 -1111 1396 474 1486 184 40 14 chr10 89366926 89367203 -50949562 - AluJo SINE Alu -28 284 1 253 303 38 97 chr10 89367204 89367389 -50949376 - HAL1 LINE L1 -2333 174 1 345 276 0 0 chr10 89367413 89367489 -50949276 + LTR67 LTR ERVL 482 557 0 1711 168 58 97 chr10 89367652 89368010 -50948755 + MSTD LTR MaLR 1 342 -54 871 164 0 0 chr10 89368010 89368138 -50948627 - L1PA15 LINE L1 -18 6147 6020 1711 168 58 97 chr10 89368138 89368191 -50948574 + MSTD LTR MaLR 342 396 0 387 0 0 0 chr10 89369109 89369152 -50947613 + (CA)n Simple_repeat Simple_repeat 2 44 0 401 309 62 19 chr10 89369744 89369954 -50946811 - MIR SINE MIR -8 254 36 878 264 31 12 chr10 89370334 89370588 -50946177 - MIR SINE MIR -1 261 3 544 325 58 65 chr10 89370630 89370907 -50945858 - L2 LINE L2 -12 3260 2986 180 111 0 0 chr10 89371214 89371241 -50945524 + (A)n Simple_repeat Simple_repeat 1 27 0 570 229 38 30 chr10 89371786 89371917 -50944848 - MER5B DNA MER1_type 0 178 47 227 313 108 48 chr10 89372183 89372349 -50944416 + L2 LINE L2 3044 3219 -53 946 186 13 66 chr10 89372353 89372579 -50944186 + MER20 DNA MER1_type 4 217 -2 1377 254 84 2 chr10 89372873 89373267 -50943498 - L1M4c LINE L1 -4586 2060 1635 3958 217 86 63 chr10 89373267 89373701 -50943064 - L1M4c LINE L1 -5216 1326 903 2363 133 34 3 chr10 89373701 89374054 -50942711 - THE1B LTR MaLR 0 364 1 3958 217 86 63 chr10 89374054 89374115 -50942650 - L1M4c LINE L1 -5639 903 845 2164 141 0 0 chr10 89374115 89374420 -50942345 - AluSx SINE Alu -7 305 1 3958 217 86 63 chr10 89374420 89375155 -50941610 - L1M4c LINE L1 -5697 845 62 8044 83 8 6 chr10 89375155 89376989 -50939776 - L1PA7 LINE L1 -2 6152 4316 3958 217 86 63 chr10 89376989 89377037 -50939728 - L1M4c LINE L1 -6480 62 17 193 314 91 109 chr10 89377875 89378085 -50938680 + L2 LINE L2 3007 3212 -60 620 227 6 0 chr10 89378898 89379074 -50937691 + CT-rich Low_complexity Low_complexity 2 178 0 586 202 11 17 chr10 89379108 89379286 -50937479 + GA-rich Low_complexity Low_complexity 4 180 0 247 93 23 0 chr10 89479369 89479412 -50837353 - LTR9 LTR ERV1 -568 44 1 1638 154 0 22 chr10 89480497 89480769 -50835996 - AluSx SINE Alu -35 277 12 562 322 105 34 chr10 89480856 89481662 -50835103 - L2 LINE L2 -130 3142 2240 203 258 32 0 chr10 89481993 89482055 -50834710 + (TCCA)n Simple_repeat Simple_repeat 3 66 0 884 171 8 0 chr10 89482070 89482334 -50834431 + (TCCA)n Simple_repeat Simple_repeat 1 266 0 240 246 18 0 chr10 89482387 89482444 -50834321 - L2 LINE L2 -2 3270 3213 316 273 0 13 chr10 89484017 89484094 -50832671 - L2 LINE L2 0 3272 3197 243 311 39 19 chr10 89484148 89484251 -50832514 - L2 LINE L2 -250 3022 2918 360 257 128 29 chr10 89484713 89484922 -50831843 - MIR SINE MIR -21 241 3 187 236 28 0 chr10 89486542 89486614 -50830151 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 298 324 169 0 chr10 89487090 89487232 -50829533 + L2 LINE L2 3101 3266 -6 919 121 29 0 chr10 89487703 89487877 -50828888 - L1 LINE L1 -1318 4828 4650 270 290 61 23 chr10 89488451 89488582 -50828183 + L2 LINE L2 3136 3271 -1 23 33 0 0 chr10 89489504 89489534 -50827231 + AT_rich Low_complexity Low_complexity 1 30 0 222 37 0 0 chr10 89489658 89489685 -50827080 + (TG)n Simple_repeat Simple_repeat 1 27 0 415 321 94 41 chr10 89489737 89490101 -50826664 - L1M4c LINE L1 -1313 1430 851 555 284 44 31 chr10 89490650 89490875 -50825890 - MIR SINE MIR -21 241 14 461 238 86 20 chr10 89491557 89491708 -50825057 - MIR SINE MIR -79 183 23 199 234 0 21 chr10 89491830 89491877 -50824888 + L2 LINE L2 3210 3255 -17 205 283 0 0 chr10 89491888 89491934 -50824831 + L2 LINE L2 3193 3238 -75 199 224 104 0 chr10 89492287 89492354 -50824411 + L2 LINE L2 3234 3307 -6 347 323 139 0 chr10 89492398 89492556 -50824209 - MIR SINE MIR -74 188 9 375 302 16 8 chr10 89494018 89494147 -50822618 + MIR SINE MIR 20 149 -113 895 132 110 16 chr10 89494447 89494629 -50822136 - L1PA16 LINE L1 0 6166 5968 312 273 16 55 chr10 89494851 89494979 -50821786 - MIR SINE MIR -120 142 20 241 237 160 46 chr10 89497645 89497776 -50818989 - MLT1H LTR MaLR -2 547 402 1991 137 18 0 chr10 89498589 89498874 -50817891 + AluJb SINE Alu 23 312 0 181 318 48 0 chr10 89498878 89498941 -50817824 - MIR SINE MIR -109 153 88 392 331 101 6 chr10 89501360 89501538 -50815227 + MLT1K LTR MaLR 340 534 -54 853 205 0 27 chr10 89503050 89503235 -50813530 - MER3 DNA MER1_type -19 190 11 260 255 144 46 chr10 89504396 89504549 -50812216 - MIR SINE MIR -65 197 30 803 216 28 6 chr10 89504576 89504752 -50812013 + MIR SINE MIR 69 248 -14 192 125 0 0 chr10 89505486 89505518 -50811247 + (TG)n Simple_repeat Simple_repeat 1 32 0 302 257 67 9 chr10 89506215 89506320 -50810445 - MIR SINE MIR -84 178 68 656 190 196 0 chr10 89507183 89507362 -50809403 + MIR SINE MIR 43 256 -6 22 0 0 0 chr10 89507362 89507384 -50809381 + AT_rich Low_complexity Low_complexity 1 22 0 345 298 9 0 chr10 89507535 89507649 -50809116 - MIR SINE MIR -61 147 33 987 174 6 3 chr10 89508218 89508416 -50808349 - L1MB7 LINE L1 -217 5953 5755 316 304 74 74 chr10 89509005 89509039 -50807726 - L1MC4 LINE L1 -195 7847 7814 1953 161 13 10 chr10 89509039 89509350 -50807415 - AluJo SINE Alu 0 312 1 316 304 74 74 chr10 89509350 89509585 -50807180 - L1MC4 LINE L1 -227 7815 7578 4747 39 0 2 chr10 89509592 89510183 -50806582 - L1PA3 LINE L1 0 6155 5566 5811 27 1 0 chr10 89510183 89511079 -50805686 + L1PA3 LINE L1 4665 5561 -594 327 307 93 28 chr10 89511403 89511618 -50805147 + L2 LINE L2 1687 1915 -1399 186 343 41 0 chr10 89511635 89511708 -50805057 + L2 LINE L2 3195 3270 -2 276 204 185 6 chr10 89511731 89511893 -50804872 - AluSc SINE Alu -7 292 102 469 194 50 134 chr10 89512054 89512255 -50804510 - LTR33 LTR ERVL -272 249 66 656 267 96 24 chr10 89512350 89512683 -50804082 - LTR16A1 LTR ERVL -99 358 2 226 210 48 32 chr10 89513684 89513746 -50803019 - MIR3 SINE MIR -47 161 99 207 199 0 37 chr10 89514434 89514488 -50802277 - MIR SINE MIR -60 148 100 206 322 105 21 chr10 89516783 89516926 -50799839 + MIR SINE MIR 77 231 -31 222 62 0 0 chr10 89517479 89517511 -50799254 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 232 298 113 32 chr10 89518136 89518260 -50798505 - MIR SINE MIR -109 153 20 322 139 125 0 chr10 89518901 89518973 -50797792 - MIR SINE MIR -79 183 103 309 388 36 0 chr10 89518992 89519211 -50797554 - MIR SINE MIR -3 259 33 415 289 44 7 chr10 89519352 89519487 -50797278 + (CATG)n Simple_repeat Simple_repeat 3 142 0 276 238 0 99 chr10 89520834 89521015 -50795750 + (CTACT)n Simple_repeat Simple_repeat 4 166 0 220 369 6 13 chr10 89521697 89521854 -50794911 + G-rich Low_complexity Low_complexity 3 158 0 234 331 8 8 chr10 89521893 89522017 -50794748 + GA-rich Low_complexity Low_complexity 1 124 0 229 256 0 51 chr10 89522035 89522113 -50794652 + C-rich Low_complexity Low_complexity 1 74 0 271 285 62 69 chr10 89523247 89523377 -50793388 + L2 LINE L2 3138 3266 -6 369 239 0 0 chr10 89523397 89523514 -50793251 + (TGGA)n Simple_repeat Simple_repeat 3 119 0 602 214 0 16 chr10 89523526 89523708 -50793057 + (TGGG)n Simple_repeat Simple_repeat 1 179 0 628 262 142 0 chr10 89524786 89525011 -50791754 + MIR SINE MIR 3 259 -3 315 331 12 12 chr10 89526148 89526311 -50790454 + (TG)n Simple_repeat Simple_repeat 1 163 0 213 232 0 0 chr10 89526334 89526403 -50790362 + (TG)n Simple_repeat Simple_repeat 2 70 0 271 279 20 91 chr10 89526644 89526941 -50789824 - L2 LINE L2 -153 3119 2844 410 138 131 0 chr10 89527573 89527681 -50789084 - MIR SINE MIR -65 143 37 414 300 88 35 chr10 89527719 89527946 -50788819 - MIR SINE MIR -18 244 6 467 268 73 12 chr10 89528085 89528249 -50788516 + MER5B DNA MER1_type 5 178 0 1422 232 103 48 chr10 89529607 89529716 -50787049 - L1M4 LINE L1 -1711 4933 4831 1610 180 37 17 chr10 89529716 89530010 -50786755 - AluJo SINE Alu -12 300 1 1422 232 103 48 chr10 89530010 89530582 -50786183 - L1M4 LINE L1 -1813 4831 4215 727 147 0 9 chr10 89531009 89531125 -50785640 - MLT1A1 LTR MaLR -246 119 5 2081 244 25 6 chr10 89531133 89531775 -50784990 - L1M4 LINE L1 -2441 4203 3550 564 222 89 30 chr10 89531774 89532087 -50784678 - L1M4 LINE L1 -3723 2921 2596 * 299 200 0 0 chr10 89532087 89532157 -50784608 - L1M4 LINE L1 -3981 2665 2596 367 143 0 0 chr10 89532157 89532227 -50784538 - L1M4 LINE L1 -3981 2665 2596 1777 191 41 13 chr10 89532227 89532862 -50783903 - L1M4 LINE L1 -3981 2665 1914 1756 143 6 12 chr10 89532862 89533183 -50783582 - L1MB3 LINE L1 0 6183 5865 1777 191 41 13 chr10 89533183 89533326 -50783439 - L1M4 LINE L1 -4732 1914 1776 1989 129 45 3 chr10 89533327 89533613 -50783152 + AluSx SINE Alu 1 298 -14 1608 176 9 102 chr10 89533632 89534053 -50782712 + MLT1B LTR MaLR 9 390 0 1197 171 12 4 chr10 89534053 89534293 -50782472 - L1M4 LINE L1 -4867 1779 1538 4149 193 27 8 chr10 89535812 89536744 -50780021 - L1ME1 LINE L1 -5 6161 5214 444 111 148 12 chr10 89537577 89537658 -50779107 + MLT1B LTR MaLR 1 92 -375 1778 138 143 51 chr10 89537658 89537841 -50778924 + MSTA LTR MaLR 1 166 -262 2477 78 0 0 chr10 89537841 89538135 -50778630 + AluY SINE Alu 5 298 -13 1778 138 143 51 chr10 89538135 89538343 -50778422 + MSTA LTR MaLR 166 428 0 813 116 0 0 chr10 89538345 89538474 -50778291 + MSTA-int LTR MaLR 3 131 -1520 * 6517 142 23 28 chr10 89538468 89538797 -50777968 + MSTA-int LTR MaLR 433 762 -818 2254 113 0 32 chr10 89538797 89539108 -50777657 + AluSc SINE Alu 1 301 -8 6517 142 23 28 chr10 89539108 89539931 -50776834 + MSTA-int LTR MaLR 762 1580 0 1726 160 169 5 chr10 89539931 89540299 -50776466 + MSTA LTR MaLR 1 428 0 1164 112 10 25 chr10 89540299 89540496 -50776269 + MLT1B LTR MaLR 88 281 -109 2574 247 74 87 chr10 89540598 89541491 -50775274 - L1M4 LINE L1 -4944 1598 732 10779 21 1 1 chr10 89541491 89543567 -50773198 + L1PA3 LINE L1 4078 6155 0 2574 247 74 87 chr10 89543567 89544279 -50772486 - L1M4 LINE L1 -5810 732 13 2704 248 88 15 chr10 89544284 89545290 -50771475 - L1MEc LINE L1 -4759 1637 559 445 339 0 6 chr10 89545738 89545918 -50770847 + (CA)n Simple_repeat Simple_repeat 1 179 0 265 247 14 0 chr10 89545968 89546041 -50770724 + (CA)n Simple_repeat Simple_repeat 1 74 0 883 155 128 16 chr10 89547508 89547695 -50769070 - MER6B DNA MER2_type -2 208 1 191 140 228 18 chr10 89547943 89548000 -50768765 - MIR SINE MIR -71 191 123 408 252 93 13 chr10 89548343 89548494 -50768271 + MIR SINE MIR 8 170 -92 723 322 72 33 chr10 89551515 89552025 -50764740 + MLT1K LTR MaLR 59 588 0 1807 153 3 21 chr10 89552223 89552547 -50764218 + AluSx SINE Alu 1 319 0 198 214 36 18 chr10 89553382 89553438 -50763327 + L2 LINE L2 2993 3049 -223 373 314 95 57 chr10 89554758 89555073 -50761692 - HAL1 LINE L1 -1303 1204 878 251 256 7 102 chr10 89555454 89555591 -50761174 - L1MEc LINE L1 -6236 160 37 2170 127 0 0 chr10 89555596 89555903 -50760862 - AluSx SINE Alu -3 309 3 22 0 0 0 chr10 89555906 89555928 -50760837 + AT_rich Low_complexity Low_complexity 1 22 0 251 284 174 0 chr10 89556032 89556141 -50760624 - L2 LINE L2 0 3272 3145 423 310 82 27 chr10 89557124 89557308 -50759457 - MIR SINE MIR -41 221 28 2174 119 3 0 chr10 89557311 89557613 -50759152 - AluSx SINE Alu -9 303 1 643 294 114 13 chr10 89557805 89558104 -50758661 - MLT1I LTR MaLR 0 409 81 307 291 95 39 chr10 89559004 89559183 -50757582 + MIR SINE MIR 23 211 -51 249 260 39 13 chr10 89559189 89559266 -50757499 - L2 LINE L2 0 3313 3235 465 221 279 6 chr10 89560771 89560943 -50755822 + MIR SINE MIR 12 230 -32 635 93 28 37 chr10 89561951 89562058 -50754707 - AluSp SINE Alu -130 183 78 1352 137 0 5 chr10 89562058 89562269 -50754496 - AluSg SINE Alu -100 210 1 476 320 122 64 chr10 89562281 89562956 -50753809 - L2 LINE L2 -38 3275 2563 219 36 0 0 chr10 89563495 89563523 -50753242 + (GA)n Simple_repeat Simple_repeat 1 28 0 183 129 0 0 chr10 89563873 89563904 -50752861 + (TG)n Simple_repeat Simple_repeat 1 31 0 359 309 121 0 chr10 89565523 89565672 -50751093 - MIR SINE MIR -33 229 63 204 308 15 15 chr10 89566418 89566483 -50750282 - MIR SINE MIR -60 148 84 388 314 100 0 chr10 89567956 89568096 -50748669 + L2 LINE L2 3160 3313 0 2757 216 61 34 chr10 89569103 89569473 -50747292 - L1ME1 LINE L1 -5 6161 5803 2005 128 3 0 chr10 89569473 89569792 -50746973 - AluSq SINE Alu 0 320 1 2757 216 61 34 chr10 89569792 89570822 -50745943 - L1ME1 LINE L1 -363 5803 4732 239 273 156 23 chr10 89571721 89571849 -50744916 + MIR3 SINE MIR 3 147 -61 234 0 0 0 chr10 89571969 89571995 -50744770 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 517 272 141 5 chr10 89572117 89572308 -50744457 + MIR SINE MIR 7 223 -39 324 70 0 0 chr10 89573711 89573754 -50743011 + (TCC)n Simple_repeat Simple_repeat 2 44 0 235 299 9 65 chr10 89574006 89574113 -50742652 - MIR SINE MIR -68 140 40 310 355 192 4 chr10 89576624 89576858 -50739907 + L2 LINE L2 2995 3272 0 312 347 90 18 chr10 89579357 89579524 -50737241 + MER5A DNA MER1_type 11 189 0 255 79 0 0 chr10 89579856 89579894 -50736871 + (TG)n Simple_repeat Simple_repeat 2 39 0 273 299 207 23 chr10 89580070 89580244 -50736521 - MIR SINE MIR -6 256 51 684 199 41 0 chr10 89581090 89581236 -50735529 - MER63 DNA MER1_type -58 778 1 385 333 129 5 chr10 89582189 89582375 -50734390 - MIR SINE MIR -52 210 2 249 288 62 25 chr10 89582869 89582949 -50733816 + MIR SINE MIR 118 200 -62 423 321 87 31 chr10 89583897 89584093 -50732672 + MIR SINE MIR 35 241 -21 1222 77 20 0 chr10 89584109 89584304 -50732461 - L1P LINE L1 -765 5381 5183 1068 31 0 0 chr10 89584304 89584430 -50732335 + L1PA5 LINE L1 6026 6153 -1 448 333 108 32 chr10 89585798 89586113 -50730652 + L2 LINE L2 2934 3272 0 228 360 122 0 chr10 89586641 89586805 -50729960 + MIR SINE MIR 70 253 -9 778 87 9 17 chr10 89587017 89587132 -50729633 + L1PA5 LINE L1 6041 6154 0 5184 98 24 27 chr10 89587743 89588553 -50728212 + SVA Other Other 580 1386 0 354 264 107 44 chr10 89589174 89589333 -50727432 - MIR SINE MIR -73 189 21 834 161 70 54 chr10 89591524 89591710 -50725055 + MER5A DNA MER1_type 1 189 0 278 238 0 16 chr10 89591710 89591773 -50724992 + MER5B DNA MER1_type 17 78 -100 967 173 0 0 chr10 89593508 89593658 -50723107 + FRAM SINE Alu 4 153 -13 189 74 0 0 chr10 89593775 89593802 -50722963 + (TC)n Simple_repeat Simple_repeat 2 28 0 417 279 62 5 chr10 89593939 89594248 -50722517 + LTR33 LTR ERVL 50 419 -102 834 321 165 15 chr10 89594391 89595037 -50721728 + L3 LINE CR1 497 1282 -295 896 278 81 30 chr10 89595596 89595930 -50720835 - MLT1I LTR MaLR 0 409 59 212 59 29 0 chr10 89596520 89596554 -50720211 + (TC)n Simple_repeat Simple_repeat 1 35 0 333 271 16 0 chr10 89596770 89596899 -50719866 + (TG)n Simple_repeat Simple_repeat 1 131 0 278 50 25 0 chr10 89597732 89597772 -50718993 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 24 53 0 0 chr10 89597896 89597934 -50718831 + AT_rich Low_complexity Low_complexity 1 38 0 1635 272 171 38 chr10 89598243 89599622 -50717143 - L2 LINE L2 -491 2823 1261 2051 131 0 0 chr10 89600450 89600719 -50716046 + AluSx SINE Alu 18 287 -21 690 55 0 0 chr10 89600719 89600810 -50715955 + (CATA)n Simple_repeat Simple_repeat 2 92 0 495 288 93 21 chr10 89600821 89601380 -50715385 + L1ME4a LINE L1 4321 4919 -1227 523 271 111 36 chr10 89601834 89602244 -50714521 + L1ME4a LINE L1 5435 5870 -251 204 313 45 18 chr10 89602995 89603107 -50713658 - MIR SINE MIR -57 205 91 444 246 16 8 chr10 89603188 89603310 -50713455 - L1MA9 LINE L1 -237 6075 5953 1541 35 0 10 chr10 89603311 89603510 -50713255 - L1PA5 LINE L1 0 6154 5958 795 56 0 0 chr10 89603510 89603618 -50713147 + L1PA5 LINE L1 5860 5967 -187 858 215 81 16 chr10 89603916 89604163 -50712602 + MLT1C LTR MaLR 8 270 -197 204 308 0 0 chr10 89604889 89604954 -50711811 + G-rich Low_complexity Low_complexity 3 67 0 234 0 0 0 chr10 89604960 89604986 -50711779 + (GGGGA)n Simple_repeat Simple_repeat 3 28 0 341 296 0 20 chr10 89605357 89605455 -50711310 + MIR SINE MIR 21 116 -146 801 274 96 37 chr10 89607048 89607219 -50709546 + L1MC5 LINE L1 7329 7489 -472 500 210 167 25 chr10 89607219 89607381 -50709384 + MER5A DNA MER1_type 4 188 -1 801 274 96 37 chr10 89607381 89607774 -50708991 + L1MC5 LINE L1 7489 7926 -35 356 256 133 38 chr10 89607940 89608156 -50708609 - MIR SINE MIR -14 248 10 21 0 0 0 chr10 89609692 89609713 -50707052 + AT_rich Low_complexity Low_complexity 1 21 0 182 231 165 33 chr10 89610223 89610314 -50706451 + MIR SINE MIR 44 146 -62 583 276 101 14 chr10 89610937 89611154 -50705611 + MIR SINE MIR 18 253 -9 630 197 0 0 chr10 89611743 89611890 -50704875 + (ATG)n Simple_repeat Simple_repeat 2 148 0 674 273 56 1 chr10 89611898 89612108 -50704657 - MIR SINE MIR -18 244 21 1285 138 77 113 chr10 89612216 89612542 -50704223 - MER7A DNA MER2_type -34 312 1 962 180 154 22 chr10 89612542 89612661 -50704104 - MER33 DNA MER1_type -2280 305 203 2193 51 0 4 chr10 89612661 89612917 -50703848 + AluY SINE Alu 40 294 -17 962 180 154 22 chr10 89612917 89613064 -50703701 - MER33 DNA MER1_type -2382 203 4 288 324 77 82 chr10 89613467 89613637 -50703128 - MIR SINE MIR -74 188 20 459 282 164 10 chr10 89616755 89616950 -50699815 + MIR SINE MIR 6 230 -32 220 269 0 30 chr10 89617160 89617227 -50699538 - L2 LINE L2 -20 3252 3188 324 253 44 11 chr10 89617436 89617527 -50699238 + MIR SINE MIR 98 191 -71 1290 174 87 10 chr10 89618233 89618521 -50698244 + MER63 DNA MER1_type 748 1057 -5 260 302 0 0 chr10 89620729 89620792 -50695973 + MIR SINE MIR 165 227 -35 1471 202 36 25 chr10 89620821 89621182 -50695583 - MLT1A1 LTR MaLR 0 365 1 230 225 138 0 chr10 89622865 89622951 -50693814 - MIR SINE MIR -68 140 74 1201 113 43 4 chr10 89623066 89623296 -50693469 - L1MA8 LINE L1 -2 6289 6051 5459 237 54 11 chr10 89623616 89625274 -50691491 - L1M4 LINE L1 -1391 4755 3026 427 337 24 6 chr10 89625315 89625484 -50691281 + MIR SINE MIR 73 244 -18 464 304 37 0 chr10 89625862 89625997 -50690768 + MIR SINE MIR 20 159 -103 * 554 299 120 4 chr10 89625988 89626222 -50690543 - MIR SINE MIR 0 262 2 238 262 193 14 chr10 89627492 89627637 -50689128 - MIR SINE MIR -44 218 48 284 68 0 23 chr10 89628240 89628284 -50688481 + (CA)n Simple_repeat Simple_repeat 2 44 0 761 157 17 73 chr10 89628381 89628559 -50688206 - MER20 DNA MER1_type -20 199 32 542 312 40 0 chr10 89628943 89629116 -50687649 + MER63A DNA MER1_type 27 206 -4 216 214 0 0 chr10 89629622 89629678 -50687087 + (CATG)n Simple_repeat Simple_repeat 3 58 0 291 297 113 44 chr10 89630192 89630512 -50686253 + LTR33A LTR ERVL 8 349 -174 285 298 29 0 chr10 89630549 89630653 -50686112 + LTR33A LTR ERVL 417 523 0 237 232 0 14 chr10 89630883 89630952 -50685813 + (CA)n Simple_repeat Simple_repeat 1 68 0 2176 173 29 11 chr10 89631009 89631459 -50685306 + L1MB3 LINE L1 5726 6183 0 191 321 155 0 chr10 89632009 89632093 -50684672 + MIR SINE MIR 156 252 -10 223 330 60 0 chr10 89632322 89632422 -50684343 - L3 LINE CR1 -156 1421 1316 233 324 119 14 chr10 89632912 89633122 -50683643 + L1MD2 LINE L1 5619 5850 -1958 202 210 0 48 chr10 89634259 89634321 -50682444 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 186 43 0 0 chr10 89635154 89635177 -50681588 + (CATTT)n Simple_repeat Simple_repeat 5 27 0 283 339 33 8 chr10 89635178 89635299 -50681466 - MIR SINE MIR -80 182 59 848 285 123 12 chr10 89635701 89636133 -50680632 - L2 LINE L2 0 3313 2834 988 228 26 9 chr10 89637243 89637475 -50679290 - MIR SINE MIR -15 247 12 198 204 23 0 chr10 89637632 89637676 -50679089 - MIR SINE MIR -16 246 202 339 298 142 18 chr10 89637956 89638174 -50678591 - L1MC4a LINE L1 -1881 5927 5683 239 228 18 0 chr10 89638999 89639056 -50677709 + L2 LINE L2 2997 3054 -218 1219 299 57 19 chr10 89639466 89640081 -50676684 + L1ME3A LINE L1 5291 5928 -242 2044 106 0 22 chr10 89640129 89640451 -50676314 + L1PA13 LINE L1 5849 6163 0 21 0 0 0 chr10 89640774 89640795 -50675970 + AT_rich Low_complexity Low_complexity 1 21 0 269 286 0 0 chr10 89641015 89641078 -50675687 + L2 LINE L2 3210 3272 0 398 216 52 0 chr10 89641776 89641873 -50674892 + MIR SINE MIR 106 207 -55 390 296 45 6 chr10 89642538 89642714 -50674051 - MER117 DNA MER1_type -8 189 7 1301 185 86 28 chr10 89644096 89644421 -50672344 + L1MD2 LINE L1 6012 6355 -4 184 309 82 18 chr10 89645601 89645711 -50671054 - MIR SINE MIR -109 153 37 211 357 48 16 chr10 89645745 89645871 -50670894 + L2 LINE L2 3138 3267 -5 2703 36 3 0 chr10 89646371 89646676 -50670089 - AluY SINE Alu -5 306 1 207 333 57 43 chr10 89647394 89647535 -50669230 + L2 LINE L2 3098 3240 -32 483 300 145 26 chr10 89647651 89647961 -50668804 + L1ME4a LINE L1 5709 6055 -66 234 344 47 31 chr10 89648064 89648192 -50668573 - MIR SINE MIR -19 243 114 245 275 0 12 chr10 89648209 89648289 -50668476 + L1ME4a LINE L1 5844 5922 -199 206 67 0 0 chr10 89648630 89648660 -50668105 + MIR SINE MIR 106 135 -127 1294 109 0 0 chr10 89698957 89699131 -50617634 + AluSg/x SINE Alu 129 302 -8 230 179 0 64 chr10 89700980 89701058 -50615707 + G-rich Low_complexity Low_complexity 4 76 0 302 271 117 67 chr10 89702023 89702263 -50614502 - L2 LINE L2 -89 3183 2932 342 0 0 0 chr10 89702598 89702636 -50614129 + (CA)n Simple_repeat Simple_repeat 2 39 0 1925 152 7 13 chr10 89704742 89705044 -50611721 - AluJb SINE Alu -7 305 6 210 229 36 24 chr10 89705187 89705270 -50611495 + T-rich Low_complexity Low_complexity 2 85 0 2352 104 7 0 chr10 89707772 89708080 -50608685 - AluSx SINE Alu 0 312 3 187 300 71 0 chr10 89708476 89708546 -50608219 - MIR SINE MIR -90 172 98 848 238 119 11 chr10 89708557 89708834 -50607931 + MLT1D LTR MaLR 12 318 -187 295 268 0 0 chr10 89709737 89709819 -50606946 - L1ME4a LINE L1 -78 6043 5962 366 318 77 18 chr10 89709853 89710023 -50606742 + L2 LINE L2 3134 3313 0 977 278 50 37 chr10 89710036 89710493 -50606272 - L1ME4a LINE L1 -248 5873 5411 956 229 64 8 chr10 89711758 89711994 -50604771 - MIR SINE MIR -3 259 11 1670 123 62 9 chr10 89712470 89712795 -50603970 + L1MB3 LINE L1 5281 5622 -561 3040 137 45 19 chr10 89712803 89713239 -50603526 - LTR24B LTR ERV1 -20 556 102 2325 126 0 0 chr10 89713239 89713549 -50603216 - AluSx SINE Alu -2 310 1 3040 137 45 19 chr10 89713549 89713651 -50603114 - LTR24B LTR ERV1 -474 102 4 3486 112 18 9 chr10 89713651 89713938 -50602827 + L1MB3 LINE L1 5616 5912 -271 1834 183 3 7 chr10 89713938 89714244 -50602521 + AluJb SINE Alu 1 305 -7 3486 112 18 9 chr10 89714244 89714517 -50602248 + L1MB3 LINE L1 5912 6181 -2 379 330 113 45 chr10 89715059 89715395 -50601370 + L2 LINE L2 2909 3267 -5 370 240 30 10 chr10 89715475 89715575 -50601190 + L2 LINE L2 188 289 -3025 882 277 56 29 chr10 89715583 89715995 -50600770 + L1ME3A LINE L1 1398 1820 -4576 2160 257 89 66 chr10 89716241 89716896 -50599869 + L1ME3A LINE L1 2183 2821 -3394 2208 139 0 0 chr10 89716896 89717197 -50599568 + AluSx SINE Alu 1 301 -11 2160 257 89 66 chr10 89717197 89717233 -50599532 + L1ME3A LINE L1 2821 2855 -3360 2259 110 3 22 chr10 89717233 89717552 -50599213 - AluSq SINE Alu 0 313 1 2160 257 89 66 chr10 89717552 89717684 -50599081 + L1ME3A LINE L1 2855 2982 -3233 2473 51 0 7 chr10 89717684 89717980 -50598785 + AluY SINE Alu 18 311 0 2160 257 89 66 chr10 89717980 89718638 -50598127 + L1ME3A LINE L1 2982 3675 -2540 2561 68 6 0 chr10 89718638 89718949 -50597816 + AluSp SINE Alu 1 313 0 2160 257 89 66 chr10 89718949 89719246 -50597519 + L1ME3A LINE L1 3675 3964 -2251 302 293 0 12 chr10 89719284 89719366 -50597399 + L1ME3A LINE L1 4548 4628 -1587 846 300 72 17 chr10 89719369 89719885 -50596880 + L1ME3A LINE L1 4665 5208 -1007 673 273 84 6 chr10 89720011 89720232 -50596533 + MLT1H1 LTR MaLR 4 279 -316 445 297 188 0 chr10 89720223 89720388 -50596377 + MLT1H1 LTR MaLR 400 595 0 * 343 189 136 0 chr10 89720390 89720511 -50596254 + L1ME3A LINE L1 5376 5534 -894 920 269 48 44 chr10 89720512 89720924 -50595841 + L1ME3A LINE L1 5611 6024 -215 1942 161 0 23 chr10 89720973 89721283 -50595482 + AluSx SINE Alu 1 303 -9 237 335 55 50 chr10 89721295 89721477 -50595288 + L1ME3A LINE L1 6035 6217 -22 207 259 210 25 chr10 89721488 89721569 -50595196 + L2 LINE L2 1422 1517 -1797 2573 239 158 25 chr10 89721653 89722931 -50593834 + L2 LINE L2 1722 3161 -152 2622 30 0 10 chr10 89722931 89723235 -50593530 - AluYa5 SINE Alu 0 311 11 583 143 84 17 chr10 89724183 89724302 -50592463 + MLT2D LTR ERVL 221 347 -67 242 284 168 0 chr10 89724845 89724940 -50591825 - MIR SINE MIR -49 213 103 621 242 0 0 chr10 89725912 89726061 -50590704 - L1MA10 LINE L1 -10 6324 6176 4277 140 36 14 chr10 89726065 89726877 -50589888 + L1MA9 LINE L1 5483 6312 0 780 213 37 57 chr10 89726890 89727134 -50589631 - L1MA10 LINE L1 -143 6191 5953 1732 217 31 13 chr10 89727659 89728046 -50588719 - MSTD LTR MaLR -2 394 1 299 235 12 12 chr10 89730029 89730110 -50586655 + GA-rich Low_complexity Low_complexity 1 81 0 351 338 114 5 chr10 89730117 89730336 -50586429 - MIR SINE MIR -7 255 13 209 176 0 0 chr10 89730662 89730696 -50586069 + CT-rich Low_complexity Low_complexity 2 35 0 953 176 0 13 chr10 89730757 89730916 -50585849 + FRAM SINE Alu 5 161 -15 220 331 14 0 chr10 89731596 89731691 -50585074 + MIR SINE MIR 20 115 -93 504 286 117 15 chr10 89732271 89732477 -50584288 - MIR SINE MIR 0 262 36 217 246 246 8 chr10 89734119 89734253 -50582512 + MIR SINE MIR 59 224 -38 204 214 0 0 chr10 89734675 89734731 -50582034 + (TCCA)n Simple_repeat Simple_repeat 4 59 0 434 233 49 18 chr10 89734772 89734935 -50581830 + (TCCA)n Simple_repeat Simple_repeat 1 168 0 265 211 0 32 chr10 89734961 89735056 -50581709 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 250 282 59 47 chr10 89735917 89736087 -50580678 - MER5A DNA MER1_type -1 188 17 1728 196 6 6 chr10 89736767 89737079 -50579686 - AluJo SINE Alu 0 312 1 342 98 0 0 chr10 89737760 89737811 -50578954 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 729 244 135 40 chr10 89737830 89738360 -50578405 - L2 LINE L2 -54 3259 2667 293 290 43 0 chr10 89738418 89738511 -50578254 - MIR SINE MIR -69 139 43 1680 153 55 3 chr10 89739409 89739736 -50577029 + L1MB3 LINE L1 5828 6171 -12 335 290 45 53 chr10 89739752 89739856 -50576909 + L1ME4a LINE L1 5639 5742 -379 2618 57 0 10 chr10 89739856 89740170 -50576595 + AluY SINE Alu 1 311 0 335 290 45 53 chr10 89740170 89740310 -50576455 + L1ME4a LINE L1 5742 5881 -240 254 254 159 47 chr10 89741142 89741374 -50575391 + L1MC4a LINE L1 1337 1594 -4936 312 27 0 0 chr10 89741433 89741470 -50575295 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2030 122 7 0 chr10 89741470 89741748 -50575017 - AluSx SINE Alu -32 280 1 268 22 44 22 chr10 89741764 89741809 -50574956 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 2043 134 0 16 chr10 89741847 89742152 -50574613 + AluSx SINE Alu 1 300 -12 330 308 48 0 chr10 89742289 89742393 -50574372 + MIR SINE MIR 103 211 -51 260 313 101 19 chr10 89742444 89742636 -50574129 + HAL1b LINE L1 447 647 -701 994 190 36 0 chr10 89742636 89742857 -50573908 + L1MB5 LINE L1 5946 6174 0 260 313 101 19 chr10 89742857 89742904 -50573861 + HAL1b LINE L1 647 689 -659 2231 119 3 0 chr10 89742934 89743227 -50573538 + AluSx SINE Alu 1 294 -18 273 284 88 14 chr10 89743480 89743628 -50573137 + MER20B DNA MER1_type 56 214 -5 402 293 66 37 chr10 89743680 89744178 -50572587 + L1MC4a LINE L1 2444 2956 -3584 494 316 95 9 chr10 89744240 89744471 -50572294 - MIR SINE MIR -9 253 3 787 320 103 10 chr10 89744780 89745361 -50571404 + L1MC4a LINE L1 4346 4980 -1560 2160 123 3 3 chr10 89745891 89746193 -50570572 + AluSx SINE Alu 1 302 -10 713 302 96 22 chr10 89746716 89747191 -50569574 + L1MC4a LINE L1 5791 6167 -348 251 333 24 24 chr10 89750673 89750799 -50565966 + MIR3 SINE MIR 15 140 -68 258 317 17 58 chr10 89751104 89751224 -50565541 - MIR SINE MIR -60 148 34 606 286 26 13 chr10 89751402 89751633 -50565132 + LTR16A LTR ERVL 199 432 -18 556 316 70 63 chr10 89752125 89752556 -50564209 + L2 LINE L2 2830 3263 -9 2545 125 54 33 chr10 89752560 89752985 -50563780 - Tigger2a DNA MER2_type 0 434 1 191 286 111 0 chr10 89753689 89753752 -50563013 - L2 LINE L2 -49 3223 3154 202 162 0 0 chr10 89753759 89753796 -50562969 - MIR SINE MIR -109 153 117 530 225 17 8 chr10 89754407 89754527 -50562238 + MER103 DNA DNA 1 121 -45 239 342 0 0 chr10 89754695 89754771 -50561994 + L2 LINE L2 3224 3299 -14 2332 46 3 26 chr10 89755886 89756188 -50560577 - AluY SINE Alu -16 295 1 2403 84 0 0 chr10 89756736 89757045 -50559720 - AluSx SINE Alu -3 309 1 387 242 42 11 chr10 89757079 89757174 -50559591 + MLT1K LTR MaLR 142 239 -349 235 238 32 16 chr10 89757147 89757210 -50559555 + MLT1K LTR MaLR 144 207 -381 * 558 278 23 23 chr10 89757210 89757386 -50559379 + MLT1K LTR MaLR 139 314 -274 2117 94 0 0 chr10 89757618 89757895 -50558870 - AluSx SINE Alu -35 277 1 761 220 6 0 chr10 89757925 89758084 -50558681 - MIR SINE MIR -73 189 30 240 233 35 81 chr10 89758132 89758218 -50558547 + L2 LINE L2 3191 3272 0 339 313 83 58 chr10 89758800 89759148 -50557617 - L2 LINE L2 -2 3311 2955 534 363 115 18 chr10 89759222 89759734 -50557031 + HAL1 LINE L1 1946 2507 0 209 314 14 0 chr10 89760177 89760247 -50556518 + L2 LINE L2 2994 3064 -208 338 319 18 9 chr10 89763058 89763171 -50553594 + MER5B DNA MER1_type 14 127 -51 493 248 39 20 chr10 89763290 89763443 -50553322 - MIR SINE MIR -78 184 29 470 283 16 43 chr10 89764913 89765097 -50551668 + L2 LINE L2 2921 3099 -173 865 287 71 36 chr10 89766407 89766828 -50549937 + MLT1K LTR MaLR 129 564 -24 281 314 122 25 chr10 89767212 89767531 -50549234 - L2 LINE L2 -3 3269 2920 831 310 134 16 chr10 89768828 89769489 -50547276 - L2 LINE L2 -7 3306 2554 2611 114 10 5 chr10 89769690 89770077 -50546688 - L1MA5 LINE L1 -5 6295 5907 350 343 77 24 chr10 89770592 89770840 -50545925 + L3 LINE CR1 810 1070 -507 351 306 44 6 chr10 89770860 89771020 -50545745 - MIR SINE MIR -14 248 83 1043 63 0 0 chr10 89771058 89771185 -50545580 + AluSg SINE Alu 1 127 -183 187 326 52 0 chr10 89771226 89771361 -50545404 - MIR3 SINE MIR -21 187 46 1965 162 24 32 chr10 89771388 89771765 -50545000 - MLT1A2 LTR MaLR 0 374 1 267 294 76 0 chr10 89772114 89772206 -50544559 - L2 LINE L2 -18 3295 3197 369 260 125 13 chr10 89773574 89773713 -50543052 - MIR SINE MIR -63 145 36 690 251 88 10 chr10 89775417 89775757 -50541008 + MLT1I LTR MaLR 16 409 0 319 333 9 0 chr10 89776589 89776703 -50540062 + (TG)n Simple_repeat Simple_repeat 1 115 0 2080 165 56 80 chr10 89777386 89777514 -50539251 + MLT1D LTR MaLR 3 132 -373 2312 90 0 0 chr10 89777514 89777815 -50538950 + AluY SINE Alu 1 301 -10 2080 165 56 80 chr10 89777815 89778201 -50538564 + MLT1D LTR MaLR 132 505 0 425 266 93 102 chr10 89779224 89779558 -50537207 + L1ME4a LINE L1 5791 6121 0 456 294 118 14 chr10 89779698 89779919 -50536846 - MIR SINE MIR -6 256 13 592 256 50 74 chr10 89780667 89780964 -50535801 + MER102b DNA MER1_type 20 309 -32 22 56 0 0 chr10 89782358 89782394 -50534371 + GC_rich Low_complexity Low_complexity 1 36 0 204 289 23 31 chr10 89784464 89784592 -50532173 + C-rich Low_complexity Low_complexity 6 132 0 24 0 0 0 chr10 89785206 89785230 -50531535 + GC_rich Low_complexity Low_complexity 1 24 0 234 0 0 0 chr10 89785593 89785619 -50531146 + (CAGCC)n Simple_repeat Simple_repeat 4 29 0 364 279 7 7 chr10 89785637 89785791 -50530974 + (CGG)n Simple_repeat Simple_repeat 1 154 0 310 270 11 35 chr10 89786045 89786219 -50530546 + C-rich Low_complexity Low_complexity 1 170 0 1017 133 0 0 chr10 89786319 89786462 -50530303 + AluSg SINE Alu 119 261 -51 237 83 0 0 chr10 89786466 89786502 -50530263 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 573 236 173 15 chr10 89786599 89786870 -50529895 + L1MC5 LINE L1 7603 7916 -45 231 190 103 0 chr10 89787326 89787384 -50529381 - MIR SINE MIR -21 241 178 26 30 0 0 chr10 89787416 89787449 -50529316 + AT_rich Low_complexity Low_complexity 1 33 0 371 303 153 26 chr10 89787456 89787684 -50529081 - MIR SINE MIR -2 260 4 1750 166 3 0 chr10 89788680 89788969 -50527796 + AluSx SINE Alu 19 308 -4 2378 74 3 0 chr10 89789547 89789845 -50526920 - AluSp SINE Alu -14 299 1 412 329 90 15 chr10 89790357 89790746 -50526019 - L1ME LINE L1 -490 5672 5255 2148 85 0 19 chr10 89791266 89791573 -50525192 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr10 89791607 89791631 -50525134 + AT_rich Low_complexity Low_complexity 1 24 0 1808 140 51 43 chr10 89791636 89791835 -50524930 + L1MC3 LINE L1 6709 6905 -880 1673 172 0 44 chr10 89791835 89792155 -50524610 + AluJb SINE Alu 1 306 -6 1808 140 51 43 chr10 89792155 89792347 -50524418 + L1MC3 LINE L1 6905 7103 -682 273 315 11 0 chr10 89792350 89792439 -50524326 + MLT1F1 LTR MaLR 45 134 -433 424 172 0 35 chr10 89792452 89792539 -50524226 + L1MC3 LINE L1 7218 7301 -484 1203 86 10 51 chr10 89792539 89792736 -50524029 + AluSg/x SINE Alu 122 310 -2 2002 138 11 149 chr10 89792739 89792790 -50523975 + L1MC3 LINE L1 7287 7343 -442 2033 126 0 7 chr10 89792790 89793091 -50523674 + AluSg SINE Alu 1 299 -11 2002 138 11 149 chr10 89793091 89793197 -50523568 + L1MC3 LINE L1 7343 7462 -323 2237 99 3 7 chr10 89793197 89793500 -50523265 + AluSx SINE Alu 1 302 -10 2002 138 11 149 chr10 89793500 89793562 -50523203 + L1MC3 LINE L1 7462 7531 -254 1624 161 10 10 chr10 89793562 89793854 -50522911 + AluJb SINE Alu 1 292 -20 2002 138 11 149 chr10 89793854 89794156 -50522609 + L1MC3 LINE L1 7531 7729 -56 1624 117 117 25 chr10 89794156 89794430 -50522335 - AluSx SINE Alu -13 299 1 2002 138 11 149 chr10 89794430 89794469 -50522296 + L1MC3 LINE L1 7729 7772 -13 1165 96 0 24 chr10 89794472 89794659 -50522106 - AluSg/x SINE Alu 0 300 118 1281 141 5 19 chr10 89794686 89794892 -50521873 - AluJo SINE Alu -25 287 85 862 149 0 8 chr10 89794901 89795035 -50521730 - FLAM_C SINE Alu -10 133 1 1056 137 0 0 chr10 89795189 89795350 -50521415 - AluSg/x SINE Alu -19 293 133 783 259 27 14 chr10 89795499 89795719 -50521046 - Charlie8 DNA MER1_type -2128 289 67 192 319 69 17 chr10 89795780 89795896 -50520869 + L2 LINE L2 3191 3312 -1 1933 149 0 0 chr10 89795940 89796242 -50520523 - AluSq SINE Alu -11 302 1 278 278 22 22 chr10 89796295 89796385 -50520380 - ERVL LTR ERVL -3418 2346 2257 1082 238 94 0 chr10 89796484 89796761 -50520004 - MLT1I LTR MaLR 0 409 107 440 280 63 34 chr10 89796907 89797082 -50519683 - ERVL LTR ERVL -3668 2096 1917 882 241 45 72 chr10 89797082 89797157 -50519608 + MLT2D LTR ERVL 1 76 -338 2065 113 0 3 chr10 89797157 89797470 -50519295 + AluSg SINE Alu 1 312 0 882 241 45 72 chr10 89797470 89797763 -50519002 + MLT2D LTR ERVL 76 362 -52 1473 196 28 3 chr10 89797763 89798049 -50518716 + AluJb SINE Alu 2 294 -18 381 312 21 0 chr10 89798055 89798148 -50518617 + L1MC4 LINE L1 6615 6709 -1333 330 157 0 86 chr10 89798118 89798188 -50518577 - L1MC4 LINE L1 -1339 6703 6640 * 2901 244 73 59 chr10 89798222 89799187 -50517578 + MLT1A2-int LTR MaLR 1 1104 -267 2224 96 26 0 chr10 89799187 89799490 -50517275 - AluSq SINE Alu -2 311 1 2901 244 73 59 chr10 89799490 89799715 -50517050 + MLT1A2-int LTR MaLR 1104 1324 -47 939 200 28 76 chr10 89799775 89800025 -50516740 + MLT1A2 LTR MaLR 1 238 -136 328 329 87 34 chr10 89800060 89800267 -50516498 + HERVL LTR ERVL 1665 1882 -3772 875 166 5 3 chr10 89800267 89800456 -50516309 - MLT1A2 LTR MaLR 0 374 185 376 123 53 0 chr10 89800419 89800476 -50516289 + MER105 DNA DNA 145 204 0 * 579 160 85 0 chr10 89800958 89801052 -50515713 - MER5B DNA MER1_type -2 176 75 255 51 51 0 chr10 89801060 89801099 -50515666 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 1703 154 18 21 chr10 89801099 89801384 -50515381 - AluSx SINE Alu -28 284 1 2015 114 7 13 chr10 89801390 89801697 -50515068 - AluSp SINE Alu -8 305 1 1596 228 54 74 chr10 89801986 89802500 -50514265 + MLT1F1 LTR MaLR 26 530 -37 2118 111 3 7 chr10 89802500 89802806 -50513959 - AluSg SINE Alu -5 305 1 1596 228 54 74 chr10 89802806 89802844 -50513921 + MLT1F1 LTR MaLR 530 567 0 1284 190 120 53 chr10 89802867 89803209 -50513556 + MLT1A1 LTR MaLR 1 365 0 1551 228 205 17 chr10 89803731 89804214 -50512551 - MLT1E LTR MaLR 0 593 20 1095 114 51 0 chr10 89804214 89804372 -50512393 - AluSg/x SINE Alu -16 294 129 1421 104 7 50 chr10 89804587 89804866 -50511899 + AluSg SINE Alu 1 267 -43 1802 135 4 0 chr10 89806001 89806268 -50510497 + AluSq SINE Alu 1 268 -45 1331 258 76 85 chr10 89806333 89806865 -50509900 + L1ME3A LINE L1 4086 4621 -1549 1996 113 23 13 chr10 89806865 89807166 -50509599 + AluSx SINE Alu 1 304 -8 1331 258 76 85 chr10 89807166 89807400 -50509365 + L1ME3A LINE L1 4621 4856 -1314 2118 178 118 15 chr10 89807400 89807856 -50508909 - MLT1D LTR MaLR -2 503 1 1331 258 76 85 chr10 89807856 89808083 -50508682 + L1ME3A LINE L1 4856 5083 -1087 1473 155 71 34 chr10 89808083 89808379 -50508386 + AluJb SINE Alu 1 307 -5 1331 258 76 85 chr10 89808379 89808608 -50508157 + L1ME3A LINE L1 5083 5312 -858 2049 134 0 6 chr10 89808608 89808921 -50507844 + AluSx SINE Alu 1 311 -1 1331 258 76 85 chr10 89808921 89809310 -50507455 + L1ME3A LINE L1 5312 5718 -452 2066 135 0 0 chr10 89809310 89809621 -50507144 + AluSx SINE Alu 1 311 -1 1331 258 76 85 chr10 89809621 89809864 -50506901 + L1ME3A LINE L1 5718 5962 -208 931 214 101 69 chr10 89809875 89810101 -50506664 - MSTD LTR MaLR -4 392 144 2100 132 0 0 chr10 89810101 89810412 -50506353 - AluSx SINE Alu 0 312 2 931 214 101 69 chr10 89810412 89810519 -50506246 - MSTD LTR MaLR -252 144 42 2033 110 3 32 chr10 89810771 89811080 -50505685 - AluSx SINE Alu -12 300 1 2784 207 57 86 chr10 89811107 89812127 -50504638 + L1ME3 LINE L1 5146 6138 -24 2179 101 3 0 chr10 89812305 89812603 -50504162 + AluSq SINE Alu 1 299 -14 509 245 82 31 chr10 89812982 89813141 -50503624 - MLT1G1 LTR MaLR 0 595 429 2038 135 3 3 chr10 89814027 89814330 -50502435 + AluJo SINE Alu 1 303 -9 1897 126 0 20 chr10 89814725 89815027 -50501738 + AluSx SINE Alu 3 298 -14 210 179 0 0 chr10 89815032 89815071 -50501694 + MIR SINE MIR 214 252 -10 2021 85 3 48 chr10 89815786 89816099 -50500666 + AluSx SINE Alu 2 301 0 243 230 319 18 chr10 89816102 89816215 -50500550 + L2 LINE L2 3165 3311 -2 350 280 198 48 chr10 89816771 89817286 -50499479 - L2 LINE L2 -351 2963 2372 702 181 97 13 chr10 89817677 89817832 -50498933 + MIR SINE MIR 14 181 -81 297 320 157 14 chr10 89818086 89818233 -50498532 - MER5B DNA MER1_type -6 172 5 1985 91 3 91 chr10 89819814 89820155 -50496610 - AluSx SINE Alu -1 311 1 280 323 40 8 chr10 89820440 89820564 -50496201 - MER113 DNA MER1_type? -29 492 365 310 222 111 11 chr10 89820582 89820672 -50496093 - HAL1b LINE L1 -8 1340 1242 186 43 0 0 chr10 89820744 89820767 -50495998 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 403 319 56 43 chr10 89820896 89821200 -50495565 - L1ME3A LINE L1 -230 5940 5633 252 232 61 24 chr10 89821268 89821350 -50495415 - L1M1 LINE L1 -720 5582 5498 2097 102 0 10 chr10 89821428 89821722 -50495043 + AluSx SINE Alu 1 291 -21 1772 152 16 7 chr10 89821860 89822169 -50494596 - AluJo SINE Alu 0 312 1 1230 151 4 46 chr10 89822210 89822449 -50494316 - AluJb SINE Alu -83 229 1 2064 119 0 3 chr10 89822453 89822746 -50494019 - AluSx SINE Alu -18 294 3 6224 135 14 1 chr10 89822764 89823749 -50493016 + L1MA4 LINE L1 5300 6297 -3 765 157 0 0 chr10 89824206 89824327 -50492438 + FLAM_C SINE Alu 2 122 -21 964 193 20 63 chr10 89824396 89824650 -50492115 - MER96B DNA MER1_type? -10 407 165 2329 90 0 0 chr10 89824875 89825176 -50491589 + AluSx SINE Alu 1 301 -11 289 246 82 18 chr10 89825414 89825524 -50491241 + L1MC4a LINE L1 6573 6689 -1119 2099 236 44 62 chr10 89825539 89826284 -50490481 + L1MC5 LINE L1 6804 7535 -426 335 249 92 65 chr10 89826339 89826524 -50490241 + L1ME3A LINE L1 5931 6120 -50 183 236 42 0 chr10 89828382 89828454 -50488311 - L2 LINE L2 -56 3257 3183 1977 114 0 4 chr10 89830301 89830637 -50486128 - AluSx SINE Alu 0 337 3 1479 197 0 23 chr10 89831037 89831342 -50485423 - AluJo SINE Alu -14 298 1 811 252 132 87 chr10 89831367 89831553 -50485212 - HAL1 LINE L1 0 2507 2331 2040 93 11 0 chr10 89831553 89831878 -50484887 - AluSg SINE Alu 0 328 1 2378 55 3 0 chr10 89831887 89832180 -50484585 - AluY SINE Alu -17 294 1 811 252 132 87 chr10 89832180 89832590 -50484175 - HAL1 LINE L1 -183 2324 1873 226 297 109 57 chr10 89832870 89833045 -50483720 + MIR SINE MIR 35 218 -44 1906 72 7 79 chr10 89833317 89833608 -50483157 - AluSx SINE Alu -40 272 3 22 35 0 0 chr10 89834077 89834106 -50482659 + AT_rich Low_complexity Low_complexity 1 29 0 2168 87 3 3 chr10 89834106 89834393 -50482372 - AluSx SINE Alu -25 287 1 1635 148 14 24 chr10 89834406 89834696 -50482069 - AluJo SINE Alu -25 287 1 1776 131 19 47 chr10 89835175 89835645 -50481120 + AluJo SINE Alu 1 461 0 530 269 64 99 chr10 89835681 89836155 -50480610 - L1ME4a LINE L1 -85 6036 5547 1824 158 28 3 chr10 89836155 89836478 -50480287 + L1MC1 LINE L1 5993 6323 -10 2223 97 0 0 chr10 89836478 89836777 -50479988 - AluSg SINE Alu -10 300 2 530 269 64 99 chr10 89836777 89836883 -50479882 - L1ME4a LINE L1 -572 5549 5477 1622 142 24 21 chr10 89836941 89837230 -50479535 + AluJb SINE Alu 1 290 -22 523 252 25 0 chr10 89837232 89837351 -50479414 - L2 LINE L2 -17 3296 3175 629 243 114 89 chr10 89837362 89837799 -50478966 - L2 LINE L2 -740 2574 2127 777 256 28 41 chr10 89837837 89837875 -50478890 - L1ME4a LINE L1 -2329 3817 3780 2092 107 31 0 chr10 89837875 89838165 -50478600 - AluSx SINE Alu -13 299 1 777 256 28 41 chr10 89838165 89838446 -50478319 - L1ME4a LINE L1 -2366 3780 3502 243 186 14 71 chr10 89838447 89838492 -50478273 - MSTB LTR MaLR 0 426 385 1476 181 4 4 chr10 89838492 89838769 -50477996 - AluJb SINE Alu -35 277 1 243 186 14 71 chr10 89838769 89838793 -50477972 - MSTB LTR MaLR -41 385 361 2072 132 0 0 chr10 89838805 89839101 -50477664 + AluSg SINE Alu 1 296 -14 704 161 8 8 chr10 89839103 89839227 -50477538 - L1MC1 LINE L1 -9 6324 6201 410 226 78 0 chr10 89839227 89839329 -50477436 - L1ME LINE L1 -482 5684 5575 1954 151 3 3 chr10 89839330 89839641 -50477124 + AluJb SINE Alu 1 311 -1 206 105 26 0 chr10 89839644 89839682 -50477083 + GA-rich Low_complexity Low_complexity 2 40 0 298 256 12 12 chr10 89839682 89839764 -50477001 - L1ME LINE L1 -572 5592 5511 * 2812 204 8 3 chr10 89839736 89840343 -50476422 + L1MA4 LINE L1 4807 5419 -750 958 118 0 15 chr10 89840349 89840484 -50476281 + AluJ SINE Alu 1 133 -169 2288 108 55 77 chr10 89840507 89840732 -50476033 + L1MA4 LINE L1 5386 5614 -686 2561 153 61 46 chr10 89840732 89841255 -50475510 + LTR26B LTR ERV1 1 531 0 2288 108 55 77 chr10 89841255 89841413 -50475352 + L1MA4 LINE L1 5614 5760 -540 2163 113 3 0 chr10 89841413 89841723 -50475042 + AluSx SINE Alu 1 311 -1 2288 108 55 77 chr10 89841723 89841791 -50474974 + L1MA4 LINE L1 5760 5828 -472 838 180 6 23 chr10 89841792 89841950 -50474815 + AluJ SINE Alu 137 293 -19 2641 126 16 72 chr10 89841950 89842467 -50474298 + L1MA4 LINE L1 5812 6299 -1 838 180 6 23 chr10 89842467 89842480 -50474285 + AluJ SINE Alu 293 305 -7 843 234 10 0 chr10 89842480 89842681 -50474084 - L1ME LINE L1 -644 5522 5320 2308 86 0 0 chr10 89842682 89842983 -50473782 - AluSx SINE Alu -11 301 1 435 266 109 80 chr10 89842985 89843458 -50473307 - L1ME LINE L1 -2220 3926 3468 1838 142 13 10 chr10 89843458 89843761 -50473004 - AluSx SINE Alu -8 304 1 435 266 109 80 chr10 89843761 89843939 -50472826 - L1ME LINE L1 -2678 3468 3297 2156 98 7 3 chr10 89843939 89844235 -50472530 - AluSq SINE Alu -16 297 1 435 266 109 80 chr10 89844235 89844504 -50472261 - L1ME LINE L1 -2849 3297 2973 2236 91 3 0 chr10 89844504 89844802 -50471963 - AluSq SINE Alu -13 300 2 435 266 109 80 chr10 89844802 89844863 -50471902 - L1ME LINE L1 -3173 2973 2915 1702 143 7 7 chr10 89844867 89845153 -50471612 - AluJb SINE Alu -17 295 10 28 0 0 0 chr10 89845168 89845196 -50471569 + AT_rich Low_complexity Low_complexity 1 28 0 2170 113 3 0 chr10 89845196 89845505 -50471260 + AluSx SINE Alu 1 310 -2 587 139 0 0 chr10 89845676 89845762 -50471003 - AluJ/FLAM SINE Alu -226 86 1 815 254 75 4 chr10 89845787 89846055 -50470710 - L1ME2 LINE L1 -278 5955 5669 431 59 85 0 chr10 89846059 89846177 -50470588 + (TA)n Simple_repeat Simple_repeat 2 129 0 1283 182 77 0 chr10 89846182 89846303 -50470462 - AluJb SINE Alu -46 266 156 426 20 0 0 chr10 89846303 89846354 -50470411 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1283 182 77 0 chr10 89846354 89846479 -50470286 - AluJb SINE Alu -156 156 1 519 247 53 35 chr10 89846489 89846659 -50470106 - L1ME2 LINE L1 -563 5670 5498 2276 104 0 0 chr10 89846666 89846975 -50469790 - AluSc SINE Alu 0 309 1 2098 113 0 7 chr10 89846977 89847287 -50469478 - AluSg SINE Alu -2 308 1 1792 154 3 3 chr10 89847289 89847587 -50469178 - AluJb SINE Alu -14 298 1 1533 235 41 2 chr10 89847595 89848007 -50468758 - L1ME2 LINE L1 -1098 5117 4690 * 1801 219 193 106 chr10 89848005 89848155 -50468610 - L1ME2 LINE L1 -2016 4199 4063 1816 131 10 7 chr10 89848155 89848446 -50468319 - AluJb SINE Alu -13 299 8 1801 219 193 106 chr10 89848446 89848962 -50467803 - L1ME2 LINE L1 -2152 4063 3593 686 199 23 8 chr10 89848962 89849093 -50467672 + AluJo SINE Alu 3 135 -177 1801 219 193 106 chr10 89849093 89850378 -50466387 - L1ME2 LINE L1 -2622 3593 2020 2026 74 0 60 chr10 89850770 89851068 -50465697 - AluSc SINE Alu -25 284 5 2045 138 7 0 chr10 89851313 89851609 -50465156 - AluSx SINE Alu -14 298 1 327 252 196 21 chr10 89851625 89851768 -50464997 - MIR SINE MIR -42 220 53 26 30 0 0 chr10 89852885 89852918 -50463847 + AT_rich Low_complexity Low_complexity 1 33 0 2010 136 14 10 chr10 89855279 89855574 -50461191 - AluSx SINE Alu -11 301 6 22 35 0 0 chr10 89857284 89857313 -50459452 + AT_rich Low_complexity Low_complexity 1 29 0 2398 49 0 39 chr10 89857319 89857624 -50459141 - AluY SINE Alu -18 293 1 400 197 77 26 chr10 89858399 89858516 -50458249 + MLT1L LTR MaLR 134 256 -359 957 100 0 8 chr10 89858749 89858879 -50457886 + AluJb SINE Alu 5 133 -179 2097 127 7 16 chr10 89859049 89859357 -50457408 - AluSx SINE Alu -7 305 1 29 60 0 0 chr10 89859416 89859466 -50457299 + AT_rich Low_complexity Low_complexity 1 50 0 2297 70 0 13 chr10 89859783 89860085 -50456680 + AluY SINE Alu 1 298 -13 239 184 340 0 chr10 89860491 89860594 -50456171 + L1MB7 LINE L1 4904 5041 -1105 3564 162 76 49 chr10 89860596 89860765 -50456000 + L1MB7 LINE L1 5159 5322 -862 1860 151 7 13 chr10 89860765 89861063 -50455702 + AluJb SINE Alu 1 296 -16 3564 162 76 49 chr10 89861063 89861886 -50454879 + L1MB7 LINE L1 5322 6183 -1 195 42 0 0 chr10 89861918 89861942 -50454823 + (A)n Simple_repeat Simple_repeat 1 24 0 1046 205 0 19 chr10 89862102 89862409 -50454356 + MER2 DNA MER2_type 3 345 0 1690 164 25 11 chr10 89862553 89862834 -50453931 - AluJo SINE Alu -17 295 11 692 250 51 10 chr10 89864037 89864233 -50452532 + Charlie1 DNA MER1_type 1 204 -2557 392 178 0 33 chr10 89864234 89864324 -50452441 + Charlie1 DNA MER1_type 2633 2719 -42 2007 128 7 13 chr10 89864792 89865097 -50451668 + AluSx SINE Alu 1 303 -9 1310 202 107 0 chr10 89865221 89865473 -50451292 + AluJb SINE Alu 1 279 -33 1762 179 0 26 chr10 89865640 89865947 -50450818 - AluJb SINE Alu -13 299 1 1105 221 24 69 chr10 89866855 89867230 -50449535 + L1MD2 LINE L1 5992 6349 -10 1751 191 0 17 chr10 89867262 89867561 -50449204 - AluJo SINE Alu -18 294 1 927 99 0 23 chr10 89868132 89868263 -50448502 - FLAM_C SINE Alu -1 132 5 2162 123 0 13 chr10 89868418 89868718 -50448047 - AluSx SINE Alu -16 296 1 255 128 0 0 chr10 89869303 89869336 -50447429 + (A)n Simple_repeat Simple_repeat 1 36 -11 2034 140 3 10 chr10 89869336 89869650 -50447115 + AluSq SINE Alu 1 312 -1 255 128 0 0 chr10 89869650 89869663 -50447102 + (A)n Simple_repeat Simple_repeat 35 47 0 1855 128 83 7 chr10 89869783 89870101 -50446664 + AluSx SINE Alu 1 340 0 7963 53 122 95 chr10 89871380 89872765 -50444000 + SVA Other Other 2 1423 0 222 235 20 0 chr10 89873689 89873740 -50443025 - L3b LINE CR1 -176 1407 1356 841 152 0 15 chr10 89874241 89874373 -50442392 + FLAM_C SINE Alu 7 136 -7 2049 107 0 0 chr10 89874398 89874659 -50442106 + AluSx SINE Alu 1 261 -51 237 83 0 0 chr10 89874663 89874699 -50442066 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 537 236 71 18 chr10 89874796 89875021 -50441744 + L1MC5 LINE L1 7603 7839 -122 252 190 103 0 chr10 89875523 89875581 -50441184 - MIR SINE MIR -21 241 178 36 62 0 0 chr10 89875613 89875677 -50441088 + AT_rich Low_complexity Low_complexity 1 64 0 310 266 165 25 chr10 89875709 89875867 -50440898 - MIR SINE MIR -65 197 18 1844 166 3 0 chr10 89876877 89877166 -50439599 + AluSx SINE Alu 19 308 -4 2466 71 3 0 chr10 89877744 89878040 -50438725 - AluSp SINE Alu -16 297 1 306 312 64 18 chr10 89878552 89878941 -50437824 - L1ME LINE L1 -490 5672 5255 2323 84 0 19 chr10 89879461 89879769 -50436996 + AluSx SINE Alu 1 302 -10 734 203 0 0 chr10 89880181 89880309 -50436456 + AluSg/x SINE Alu 144 271 -39 3632 134 176 7 chr10 89880338 89881082 -50435683 + Tigger3(Golem) DNA MER2_type 2159 3028 -1 1756 150 36 11 chr10 89881589 89881891 -50434874 + AluSx SINE Alu 1 309 0 2055 116 0 46 chr10 89882206 89882533 -50434232 - AluSx SINE Alu 0 312 1 1581 171 168 0 chr10 89882533 89882879 -50433886 + LTR47A LTR ERVL 46 449 -3 1976 138 11 3 chr10 89883320 89883603 -50433162 + AluJo SINE Alu 4 288 -24 30 27 0 0 chr10 89883606 89883643 -50433122 + AT_rich Low_complexity Low_complexity 1 37 0 1546 195 7 14 chr10 89883736 89884028 -50432737 - AluJb SINE Alu -22 290 1 182 239 65 0 chr10 89884195 89884241 -50432524 - MIR SINE MIR -136 126 78 2279 90 0 7 chr10 89884704 89885005 -50431760 - AluY SINE Alu -12 299 1 1738 155 14 17 chr10 89885229 89885526 -50431239 - AluJb SINE Alu -16 296 1 27 29 0 0 chr10 89885561 89885595 -50431170 + AT_rich Low_complexity Low_complexity 1 34 0 1317 135 5 29 chr10 89885711 89885847 -50430918 + AluSq SINE Alu 2 133 -180 2203 100 0 10 chr10 89885847 89886166 -50430599 + AluSx SINE Alu 1 312 0 1317 135 5 29 chr10 89886166 89886236 -50430529 + AluSq SINE Alu 133 203 -110 2339 107 0 3 chr10 89886272 89886582 -50430183 - AluSx SINE Alu -3 309 1 613 199 30 15 chr10 89886921 89887052 -50429713 - FLAM_A SINE Alu 0 133 1 2304 104 0 3 chr10 89887063 89887362 -50429403 - AluSx SINE Alu -14 298 1 1471 181 91 18 chr10 89888681 89888957 -50427808 - AluJb SINE Alu -10 302 7 2231 114 3 3 chr10 89891260 89891558 -50425207 + AluSx SINE Alu 1 298 -14 655 138 0 0 chr10 89891610 89891704 -50425061 + AluJ/FLAM SINE Alu 1 94 -218 330 186 29 0 chr10 89891704 89891774 -50424991 + AluJo SINE Alu 66 137 -165 475 302 104 10 chr10 89891907 89892195 -50424570 - MER46C DNA MER2_type -22 316 2 604 156 52 44 chr10 89892927 89893062 -50423703 + AluJo SINE Alu 1 136 -176 2236 87 0 0 chr10 89893112 89893399 -50423366 + AluY SINE Alu 1 287 -24 2263 97 7 0 chr10 89893436 89893734 -50423031 + AluSx SINE Alu 2 301 -11 1908 118 11 4 chr10 89894549 89894812 -50421953 + AluSq SINE Alu 1 265 -48 2080 108 87 0 chr10 89894826 89895113 -50421652 + AluSq SINE Alu 1 312 -1 1753 167 3 10 chr10 89895176 89895470 -50421295 + AluJb SINE Alu 1 292 -20 2194 117 0 13 chr10 89895841 89896157 -50420608 + AluSx SINE Alu 1 312 0 2232 103 13 6 chr10 89896271 89896582 -50420183 - AluSq SINE Alu 0 313 1 381 258 149 16 chr10 89897689 89897883 -50418882 + MLT1J LTR MaLR 28 247 -264 1072 234 83 134 chr10 89898295 89898410 -50418355 + L1MC4 LINE L1 5821 5940 -1972 2300 82 3 0 chr10 89898410 89898701 -50418064 - AluSp SINE Alu -21 292 1 1072 234 83 134 chr10 89898701 89899796 -50416969 + L1MC4 LINE L1 5940 7052 -860 845 175 29 0 chr10 89899796 89899967 -50416798 + L1MA9 LINE L1 5934 6109 -203 1011 188 86 0 chr10 89899970 89900167 -50416598 + Tigger3(Golem) DNA MER2_type 2 215 -2814 1269 119 6 0 chr10 89900168 89900344 -50416421 + AluSp SINE Alu 2 178 -135 1644 142 7 28 chr10 89900444 89900732 -50416033 + AluSx SINE Alu 23 304 -8 839 135 5 146 chr10 89900735 89900768 -50415997 + AluJo/FRAM SINE Alu 137 173 -139 2391 101 62 0 chr10 89900768 89901123 -50415642 + MER51B LTR ERV1 1 377 0 839 135 5 146 chr10 89901123 89901281 -50415484 + AluJo/FRAM SINE Alu 173 301 -11 2486 90 0 0 chr10 89901354 89901665 -50415100 + AluSq SINE Alu 1 311 -2 907 152 0 0 chr10 89902124 89902256 -50414509 + FRAM SINE Alu 26 157 -19 309 291 13 70 chr10 89902438 89902596 -50414169 - MIR SINE MIR -112 150 2 2642 36 13 0 chr10 89904388 89904693 -50412072 - AluY SINE Alu -2 309 1 2743 157 67 24 chr10 89905790 89906339 -50410426 + MER50 LTR ERV1 1 573 -161 1950 142 23 0 chr10 89906339 89906642 -50410123 - AluSx SINE Alu -2 310 1 466 271 7 29 chr10 89906653 89906751 -50410014 + L2 LINE L2 3172 3271 -42 1439 179 42 3 chr10 89906751 89907063 -50409702 + MER33 DNA MER1_type 1 324 0 466 271 7 29 chr10 89907063 89907078 -50409687 + L2 LINE L2 3271 3285 -28 2178 133 0 3 chr10 89907078 89907379 -50409386 + AluJb SINE Alu 1 300 -12 466 271 7 29 chr10 89907379 89907404 -50409361 + L2 LINE L2 3285 3308 -5 2256 137 75 50 chr10 89907425 89907674 -50409091 + L1MC2 LINE L1 5815 6056 -288 2192 124 14 0 chr10 89907674 89907964 -50408801 + AluSx SINE Alu 3 296 -16 2256 137 75 50 chr10 89907964 89908128 -50408637 + L1MC2 LINE L1 6056 6246 -98 2178 131 3 3 chr10 89908128 89908434 -50408331 + AluSx SINE Alu 1 306 -6 2256 137 75 50 chr10 89908434 89908536 -50408229 + L1MC2 LINE L1 6246 6344 0 199 250 28 28 chr10 89908545 89908617 -50408148 + L2 LINE L2 2668 2739 -575 1097 168 35 35 chr10 89908924 89909056 -50407709 + AluSx SINE Alu 1 135 -177 2456 75 0 13 chr10 89909056 89909362 -50407403 + AluY SINE Alu 1 302 -9 1097 168 35 35 chr10 89909362 89909432 -50407333 + AluSx SINE Alu 134 203 -109 250 216 0 39 chr10 89909577 89909628 -50407137 + FRAM/FAM SINE Alu 2 50 -116 366 182 0 30 chr10 89909728 89909827 -50406938 + GA-rich Low_complexity Low_complexity 3 98 0 1277 78 6 0 chr10 89909836 89910015 -50406750 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 484 190 89 67 chr10 89910126 89910228 -50406537 + L1MB4 LINE L1 5971 6080 -100 1542 96 55 0 chr10 89910228 89910446 -50406319 - MER30 DNA MER1_type 0 230 1 484 190 89 67 chr10 89910446 89910522 -50406243 + L1MB4 LINE L1 6080 6153 -27 1999 132 28 0 chr10 89910531 89910819 -50405946 - AluSx SINE Alu -16 296 1 194 0 0 37 chr10 89910854 89910881 -50405884 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 637 167 0 0 chr10 89910883 89910979 -50405786 - FLAM_A SINE Alu -27 115 20 374 337 65 15 chr10 89911061 89911260 -50405505 - LTR33 LTR ERVL -310 211 3 919 254 107 26 chr10 89911569 89911916 -50404849 + MLT1J2 LTR MaLR 3 377 -73 452 227 92 0 chr10 89911902 89912021 -50404744 + MLT1F1 LTR MaLR 271 400 -167 * 1102 122 0 26 chr10 89912024 89912203 -50404562 + FAM SINE Alu 1 48 0 928 163 29 0 chr10 89912204 89912376 -50404389 + MLT1F1 LTR MaLR 391 567 0 344 308 19 51 chr10 89912399 89912555 -50404210 - L1M4 LINE L1 -1120 5026 4876 2031 109 10 20 chr10 89913146 89913480 -50403285 - AluSx SINE Alu 0 312 1 822 261 142 35 chr10 89913842 89914211 -50402554 - LTR33 LTR ERVL -4 517 102 4282 83 5 0 chr10 89914211 89914762 -50402003 - MER41A LTR ERV1 0 554 1 822 261 142 35 chr10 89914762 89914787 -50401978 - LTR33 LTR ERVL -419 102 81 211 308 15 0 chr10 89915040 89915105 -50401660 - MIR SINE MIR -97 111 46 2143 157 12 3 chr10 89915276 89915614 -50401151 + MER61A LTR ERV1 1 341 -2 579 152 9 0 chr10 89916375 89916480 -50400285 - MSTC LTR MaLR 0 428 323 539 126 0 0 chr10 89916480 89916567 -50400198 - L1MC1 LINE L1 -447 5886 5800 339 154 13 103 chr10 89916567 89916645 -50400120 - MSTC LTR MaLR -160 268 198 539 164 10 0 chr10 89916647 89916751 -50400014 + CT-rich Low_complexity Low_complexity 4 108 0 2145 136 7 3 chr10 89916756 89917065 -50399700 - AluSq SINE Alu -1 312 3 1150 102 134 0 chr10 89917066 89917253 -50399512 - MSTC LTR MaLR -216 212 1 817 201 15 20 chr10 89917448 89917647 -50399118 - LTR33 LTR ERVL 0 521 324 1229 160 19 133 chr10 89917817 89917918 -50398847 + MER58B DNA MER1_type 6 117 -2303 4522 136 28 0 chr10 89917918 89918626 -50398139 + L1MC1 LINE L1 5601 6328 -5 1229 160 19 133 chr10 89918626 89918886 -50397879 + MER58B DNA MER1_type 117 326 -15 2156 124 7 0 chr10 89919181 89919472 -50397293 + AluSx SINE Alu 4 296 -16 402 279 98 11 chr10 89919478 89919661 -50397104 + LTR16C LTR ERVL 291 489 -2 734 159 13 51 chr10 89919844 89920116 -50396649 + CT-rich Low_complexity Low_complexity 1 282 -313 2226 133 0 19 chr10 89920116 89920433 -50396332 - AluSx SINE Alu -1 311 1 734 159 13 51 chr10 89920433 89920463 -50396302 + CT-rich Low_complexity Low_complexity 282 595 0 1582 195 0 14 chr10 89920464 89920741 -50396024 - AluJo SINE Alu -39 273 1 2179 145 0 3 chr10 89922052 89922362 -50394403 + AluSg SINE Alu 1 309 -1 345 279 85 0 chr10 89922362 89922491 -50394274 + MER20 DNA MER1_type 79 218 -1 318 194 0 0 chr10 89922656 89922717 -50394048 - MIR SINE MIR -94 114 53 24 32 0 0 chr10 89922864 89922895 -50393870 + AT_rich Low_complexity Low_complexity 1 31 0 2806 94 3 0 chr10 89922940 89923303 -50393462 - THE1B LTR MaLR 0 364 1 2237 88 10 20 chr10 89923599 89923894 -50392871 - AluSq SINE Alu -21 292 1 2261 131 113 5 chr10 89923955 89924345 -50392420 + MSTB1 LTR MaLR 1 432 0 2210 120 7 0 chr10 89924462 89924761 -50392004 + AluSx SINE Alu 1 301 -11 2397 80 3 3 chr10 89924978 89925280 -50391485 - AluY SINE Alu -9 302 1 366 246 79 16 chr10 89925321 89925447 -50391318 + MIR SINE MIR 65 198 -64 320 367 42 0 chr10 89925766 89925886 -50390879 - L1MC/D LINE L1 -2050 5758 5634 2205 120 0 0 chr10 89925886 89926198 -50390567 - AluSx SINE Alu 0 312 1 627 215 0 16 chr10 89926213 89926334 -50390431 - FLAM_C SINE Alu -23 120 2 2390 96 0 0 chr10 89926523 89926824 -50389941 - AluSx SINE Alu -11 301 1 2235 117 0 3 chr10 89926826 89927133 -50389632 - AluSq SINE Alu -7 306 1 461 250 45 32 chr10 89927872 89928028 -50388737 - MIR3 SINE MIR -49 159 2 930 108 0 8 chr10 89928179 89928308 -50388457 + FLAM_C SINE Alu 1 128 -15 181 241 52 0 chr10 89929235 89929293 -50387472 + MIR SINE MIR 87 147 -61 21 57 0 0 chr10 89930567 89930602 -50386163 + AT_rich Low_complexity Low_complexity 1 35 0 320 246 0 15 chr10 89930604 89930669 -50386096 + L1MC/D LINE L1 5292 5355 -2453 370 261 53 48 chr10 89930762 89930969 -50385796 + L1MC/D LINE L1 5591 5798 -2010 * 2106 101 3 34 chr10 89930973 89931269 -50385496 - AluSx SINE Alu -12 300 14 1069 238 42 0 chr10 89931269 89931527 -50385238 + L1MC/D LINE L1 5408 5679 -2129 22 35 0 0 chr10 89931550 89931579 -50385186 + AT_rich Low_complexity Low_complexity 1 29 0 327 262 54 7 chr10 89931583 89931732 -50385033 + L1MC/D LINE L1 5641 5796 -2012 718 139 0 0 chr10 89931738 89931846 -50384919 - AluSg/x SINE Alu 0 310 203 407 148 0 0 chr10 89931947 89932038 -50384727 + AluS SINE Alu 222 312 0 849 148 0 0 chr10 89932110 89932255 -50384510 - FLAM_C SINE Alu 0 145 1 180 0 0 0 chr10 89932387 89932407 -50384358 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2284 104 3 0 chr10 89932409 89932698 -50384067 - AluSx SINE Alu -20 292 3 382 256 71 36 chr10 89933000 89933168 -50383597 - MLT1F1 LTR MaLR -2 540 367 635 283 22 54 chr10 89933177 89933417 -50383348 - MLT1F1 LTR MaLR -274 266 68 2435 107 0 0 chr10 89933417 89933725 -50383040 - AluSq SINE Alu -5 308 1 635 283 22 54 chr10 89933725 89933791 -50382974 - MLT1F1 LTR MaLR -472 68 1 247 339 31 4 chr10 89934047 89934151 -50382614 + MIR SINE MIR 17 118 -90 868 231 24 5 chr10 89934156 89934368 -50382397 - LTR33 LTR ERVL -2 519 304 349 200 171 9 chr10 89934504 89934609 -50382156 - LTR33 LTR ERVL -399 122 1 2229 115 7 0 chr10 89934754 89935050 -50381715 + AluSx SINE Alu 1 298 -14 822 111 79 0 chr10 89935315 89935441 -50381324 - AluSx SINE Alu -2 308 173 638 107 0 0 chr10 89935441 89935525 -50381240 - AluSx SINE Alu -228 85 2 21 0 0 0 chr10 89936093 89936114 -50380651 + AT_rich Low_complexity Low_complexity 1 21 0 634 141 0 0 chr10 89936114 89936213 -50380552 - FRAM SINE Alu -20 156 58 2060 119 26 85 chr10 89936213 89936600 -50380165 - THE1B LTR MaLR 0 364 1 6271 97 26 9 chr10 89936600 89937490 -50379275 - THE1B-int LTR MaLR 0 1580 676 308 189 0 0 chr10 89937490 89937543 -50379222 - AluS SINE Alu -243 57 5 2397 85 0 3 chr10 89937554 89937849 -50378916 - AluSx SINE Alu -16 296 3 1751 155 30 23 chr10 89938212 89938516 -50378249 + AluJb SINE Alu 7 312 0 1387 168 82 86 chr10 89938564 89939016 -50377749 - LTR7 LTR ERV1 0 450 1 3384 107 35 9 chr10 89939016 89939559 -50377206 - HERVH LTR ERV1 0 7713 7157 1619 126 0 0 chr10 89939552 89939813 -50376952 - HERVH LTR ERV1 -1697 6016 5756 * 3931 158 14 9 chr10 89939803 89941056 -50375709 - HERVH LTR ERV1 -1935 4719 3357 * 12363 127 9 28 chr10 89941052 89943128 -50373637 - HERVH LTR ERV1 -4876 2837 800 1928 164 61 27 chr10 89943183 89943627 -50373138 - HERVH LTR ERV1 -7254 459 1 804 154 147 24 chr10 89943627 89943985 -50372780 - LTR7 LTR ERV1 0 450 1 4539 125 42 50 chr10 89944357 89944615 -50372150 - MER4E LTR ERV1 0 779 521 1920 127 83 0 chr10 89944615 89944891 -50371874 - AluSx SINE Alu -13 299 1 4539 125 42 50 chr10 89944891 89945275 -50371490 - MER4E LTR ERV1 -258 521 136 2211 125 0 3 chr10 89945275 89945586 -50371179 + AluSx SINE Alu 1 310 -2 4539 125 42 50 chr10 89945586 89945682 -50371083 - MER4E LTR ERV1 -643 136 44 2655 40 0 0 chr10 89945682 89945982 -50370783 + AluY SINE Alu 1 300 -11 4539 125 42 50 chr10 89945982 89946026 -50370739 - MER4E LTR ERV1 -735 44 1 3672 107 114 46 chr10 89946443 89947090 -50369675 - LTR8 LTR ERV1 0 691 1 321 175 126 78 chr10 89947470 89947491 -50369274 + L1M4 LINE L1 5431 5450 -724 2378 100 0 7 chr10 89947491 89947801 -50368964 - AluSq SINE Alu 0 313 6 321 175 126 78 chr10 89947801 89947882 -50368883 + L1M4 LINE L1 5450 5538 -636 584 141 0 10 chr10 89947884 89947983 -50368782 + MER4A LTR ERV1 1 98 -566 319 122 11 7 chr10 89947983 89948075 -50368690 + MER4A LTR ERV1 261 415 -249 2179 100 4 4 chr10 89948094 89948375 -50368390 - AluSq SINE Alu -32 281 1 246 53 53 0 chr10 89948377 89948415 -50368350 + MER4A LTR ERV1 407 446 -218 1470 130 4 9 chr10 89948481 89948711 -50368054 + MER4B LTR ERV1 382 610 0 2023 99 4 0 chr10 89948758 89949011 -50367754 - AluSp SINE Alu -20 293 40 297 216 23 0 chr10 89949137 89949225 -50367540 + AluSp/q SINE Alu 214 303 0 964 126 42 0 chr10 89949234 89949401 -50367364 + L1MB4 LINE L1 5968 6141 -39 2158 97 0 52 chr10 89949403 89949551 -50367214 + AluSx SINE Alu 1 126 -186 1102 37 0 0 chr10 89949551 89949686 -50367079 + L1PA4 LINE L1 6018 6152 -3 2158 97 0 52 chr10 89949686 89949845 -50366920 + AluSx SINE Alu 126 292 -20 1851 146 56 3 chr10 89949973 89950260 -50366505 - AluSx SINE Alu -8 304 3 288 0 0 0 chr10 89950631 89950663 -50366102 + (TC)n Simple_repeat Simple_repeat 1 32 0 * 333 0 0 0 chr10 89950662 89950699 -50366066 + (CA)n Simple_repeat Simple_repeat 1 37 0 2272 128 0 0 chr10 89950750 89951062 -50365703 - AluSx SINE Alu 0 312 1 298 244 61 84 chr10 89951180 89951393 -50365372 - LTR67 LTR ERVL 0 557 350 896 211 0 49 chr10 89951969 89952173 -50364592 - AluJ SINE Alu -5 307 114 347 0 23 0 chr10 89952305 89952348 -50364417 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 712 124 0 19 chr10 89952348 89952453 -50364312 - AluJ SINE Alu -192 120 18 389 229 7 36 chr10 89952459 89952599 -50364166 - L1MC4a LINE L1 -1819 5989 5854 611 234 0 0 chr10 89952622 89952729 -50364036 - AluSc SINE Alu -36 273 167 24 53 0 0 chr10 89952913 89952951 -50363814 + AT_rich Low_complexity Low_complexity 1 38 0 1131 236 43 0 chr10 89952974 89953232 -50363533 - L1MC4a LINE L1 -2129 5679 5411 2019 144 3 0 chr10 89953232 89953530 -50363235 + AluSx SINE Alu 14 312 0 384 250 0 0 chr10 89953535 89953631 -50363134 + L1M LINE L1 5327 5422 -2386 2022 125 28 0 chr10 89953632 89953919 -50362846 - AluSx SINE Alu -17 295 1 232 167 0 0 chr10 89953973 89954021 -50362744 + (TTG)n Simple_repeat Simple_repeat 1 48 0 776 165 19 96 chr10 89954021 89954037 -50362728 - L1MC4a LINE L1 -824 5322 5306 748 147 0 66 chr10 89954037 89954173 -50362592 - FLAM_C SINE Alu -6 127 1 776 165 19 96 chr10 89954173 89954287 -50362478 - L1MC4a LINE L1 -840 5306 5185 216 0 0 0 chr10 89954287 89954311 -50362454 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1950 139 4 0 chr10 89954314 89954587 -50362178 - AluSx SINE Alu -34 278 5 776 165 19 96 chr10 89954587 89954711 -50362054 - L1MC4a LINE L1 -963 5183 5083 * 1306 164 18 9 chr10 89954709 89954727 -50362038 - L1MCa LINE L1 -5064 843 827 2325 109 3 0 chr10 89954727 89955039 -50361726 - AluSq SINE Alu 0 313 1 1306 164 18 9 chr10 89955039 89955212 -50361553 - L1MCa LINE L1 -5080 827 648 1933 162 3 10 chr10 89955212 89955390 -50361375 - AluJo SINE Alu 0 312 135 1794 80 101 14 chr10 89955390 89955666 -50361099 - AluSc SINE Alu -9 300 1 1933 162 3 10 chr10 89955666 89955801 -50360964 - AluJo SINE Alu -177 135 1 1306 164 18 9 chr10 89955801 89955867 -50360898 - L1MCa LINE L1 -5259 648 584 823 66 123 0 chr10 89955914 89956036 -50360729 + MER85 DNA T2_type 1 137 -2 799 173 0 0 chr10 89956060 89956193 -50360572 - FLAM_A SINE Alu 0 133 1 1323 194 9 0 chr10 89956755 89956977 -50359788 + MER58A DNA MER1_type 1 224 0 1684 272 25 20 chr10 89957139 89957488 -50359277 - LTR16C LTR ERVL 0 491 138 2228 106 6 37 chr10 89957488 89957810 -50358955 - AluSx SINE Alu 0 312 1 1684 272 25 20 chr10 89957810 89957949 -50358816 - LTR16C LTR ERVL -353 138 1 2197 107 0 17 chr10 89958311 89958611 -50358154 - AluSx SINE Alu -17 295 1 2054 117 0 4 chr10 89958776 89959050 -50357715 - AluSq SINE Alu -30 283 11 2240 92 0 54 chr10 89959072 89959386 -50357379 - AluSp SINE Alu -11 302 6 2243 94 3 7 chr10 89959620 89959917 -50356848 - AluSq SINE Alu -11 302 7 1823 51 9 0 chr10 89960559 89960775 -50355990 + AluY SINE Alu 1 218 -93 266 50 50 0 chr10 89960775 89960815 -50355950 + AluY SINE Alu 250 291 -9 23 54 0 0 chr10 89961241 89961278 -50355487 + AT_rich Low_complexity Low_complexity 1 37 0 1401 127 0 0 chr10 89962220 89962409 -50354356 + AluSx SINE Alu 40 228 -84 279 221 180 59 chr10 89963720 89963769 -50352996 + L1MC5 LINE L1 7638 7680 -281 2201 92 3 0 chr10 89963769 89964080 -50352685 + AluSp SINE Alu 1 312 0 279 221 180 59 chr10 89964080 89964251 -50352514 + L1MC5 LINE L1 7680 7886 -75 225 65 0 0 chr10 89964522 89964553 -50352212 + (A)n Simple_repeat Simple_repeat 1 31 0 312 130 98 76 chr10 89966344 89966436 -50350329 + L1MC5 LINE L1 7838 7931 -30 275 262 8 63 chr10 89966415 89966541 -50350224 + HAL1 LINE L1 2353 2471 -36 * 475 239 157 19 chr10 89967487 89967646 -50349119 + MER5A DNA MER1_type 9 189 0 327 25 0 0 chr10 89967935 89967975 -50348790 + (TG)n Simple_repeat Simple_repeat 2 41 0 989 230 147 30 chr10 89968937 89969332 -50347433 + L2 LINE L2 2868 3308 -5 245 29 29 0 chr10 89969365 89969399 -50347366 + (TA)n Simple_repeat Simple_repeat 1 35 0 2251 88 7 3 chr10 89969399 89969694 -50347071 - AluSc SINE Alu -13 296 1 2056 145 3 0 chr10 89969698 89970009 -50346756 - AluJb SINE Alu 0 312 1 829 257 150 27 chr10 89970411 89970934 -50345831 + L2 LINE L2 2719 3309 -4 2474 67 0 3 chr10 89970969 89971267 -50345498 + AluY SINE Alu 1 297 -14 2093 117 4 0 chr10 89971276 89971549 -50345216 + AluSq SINE Alu 15 288 -25 410 265 45 35 chr10 89971562 89971762 -50345003 - L1M4 LINE L1 -3529 2617 2416 1471 251 122 47 chr10 89971777 89972286 -50344479 + MLT1H LTR MaLR 1 547 -2 1413 142 76 76 chr10 89972438 89972741 -50344024 - AluJb SINE Alu -9 303 1 1995 111 25 7 chr10 89972749 89973062 -50343703 - AluSx SINE Alu 0 318 1 410 216 0 41 chr10 89973073 89973170 -50343595 + L2 LINE L2 3172 3264 -49 1466 179 42 3 chr10 89973171 89973483 -50343282 + MER33 DNA MER1_type 1 324 0 2151 133 0 3 chr10 89973498 89973799 -50342966 + AluJb SINE Alu 1 300 -12 2351 127 74 72 chr10 89973845 89974094 -50342671 + L1MC2 LINE L1 5815 6062 -282 2164 117 14 7 chr10 89974094 89974384 -50342381 + AluSx SINE Alu 3 294 -18 2351 127 74 72 chr10 89974384 89974548 -50342217 + L1MC2 LINE L1 6062 6232 -112 2158 119 3 3 chr10 89974548 89974842 -50341923 + AluSx SINE Alu 1 294 -18 2351 127 74 72 chr10 89974842 89974956 -50341809 + L1MC2 LINE L1 6232 6344 0 23 0 0 0 chr10 89975031 89975054 -50341711 + AT_rich Low_complexity Low_complexity 1 23 0 731 133 39 23 chr10 89975344 89975472 -50341293 + AluJo SINE Alu 1 130 -172 2442 75 0 13 chr10 89975476 89975782 -50340983 + AluY SINE Alu 1 302 -9 2055 145 7 7 chr10 89975785 89976089 -50340676 + AluSx SINE Alu 1 304 -8 854 133 5 144 chr10 89976089 89976125 -50340640 + AluJo SINE Alu 134 173 -139 2442 101 62 0 chr10 89976125 89976480 -50340285 + MER51B LTR ERV1 1 377 0 854 133 5 144 chr10 89976480 89976638 -50340127 + AluJo SINE Alu 173 301 -11 2501 90 0 0 chr10 89976711 89977022 -50339743 + AluSq SINE Alu 1 311 -2 894 152 0 0 chr10 89977481 89977613 -50339152 + FRAM SINE Alu 26 157 -19 256 253 0 38 chr10 89977845 89977924 -50338841 - MIR SINE MIR -156 106 31 2631 36 13 0 chr10 89979742 89980047 -50336718 - AluY SINE Alu -2 309 1 2916 148 67 24 chr10 89981142 89981691 -50335074 + MER50 LTR ERV1 1 573 -161 1738 142 22 0 chr10 89981691 89981965 -50334800 - AluSx SINE Alu -2 310 31 447 136 159 11 chr10 89981965 89982053 -50334712 - LTR12 LTR ERV1 -133 581 481 316 224 31 20 chr10 89982055 89982153 -50334612 - LTR30 LTR ERV1 -80 642 544 323 125 23 23 chr10 89982185 89982273 -50334492 + C-rich Low_complexity Low_complexity 2 89 0 425 126 28 28 chr10 89982328 89982438 -50334327 - LTR12 LTR ERV1 -508 206 43 287 189 97 24 chr10 89982446 89982547 -50334218 - AluS SINE Alu -225 78 1 657 150 55 8 chr10 89982548 89982675 -50334090 + MER50 LTR ERV1 540 672 -62 2299 99 0 19 chr10 89982747 89983059 -50333706 - AluSg SINE Alu -4 306 1 2098 126 7 0 chr10 89984192 89984486 -50332279 - AluSg SINE Alu -14 296 1 2030 120 0 7 chr10 89984493 89984813 -50331952 - AluSx SINE Alu 0 318 1 613 199 30 15 chr10 89985152 89985283 -50331482 - FLAM_A SINE Alu 0 133 1 2318 104 0 3 chr10 89985294 89985593 -50331172 - AluSx SINE Alu -14 298 1 1451 181 91 18 chr10 89986912 89987188 -50329577 - AluJb SINE Alu -10 302 7 2241 114 3 3 chr10 89989491 89989789 -50326976 + AluSx SINE Alu 1 298 -14 651 140 0 0 chr10 89989842 89989935 -50326830 + AluJ/FLAM SINE Alu 2 94 -218 357 186 29 0 chr10 89989935 89990005 -50326760 + AluJo SINE Alu 66 137 -165 575 292 108 14 chr10 89990138 89990426 -50326339 - MER46C DNA MER2_type -22 316 2 605 157 52 45 chr10 89991159 89991293 -50325472 + AluJo SINE Alu 2 136 -176 2276 87 0 0 chr10 89991343 89991630 -50325135 + AluY SINE Alu 1 287 -24 2287 97 7 0 chr10 89991667 89991965 -50324800 + AluSx SINE Alu 2 301 -11 1923 118 11 4 chr10 89992780 89993043 -50323722 + AluSq SINE Alu 1 265 -48 2096 108 87 0 chr10 89993057 89993344 -50323421 + AluSq SINE Alu 1 312 -1 1764 167 3 10 chr10 89993407 89993701 -50323064 + AluJb SINE Alu 1 292 -20 2208 117 0 13 chr10 89994072 89994388 -50322377 + AluSx SINE Alu 1 312 0 2256 103 13 6 chr10 89994502 89994813 -50321952 - AluSq SINE Alu 0 313 1 442 258 149 16 chr10 89995920 89996114 -50320651 + MLT1J LTR MaLR 28 247 -264 1253 230 83 136 chr10 89996508 89996641 -50320124 + L1MC4 LINE L1 5806 5944 -1968 2331 82 3 0 chr10 89996641 89996932 -50319833 - AluSp SINE Alu -21 292 1 1253 230 83 136 chr10 89996932 89998027 -50318738 + L1MC4 LINE L1 5944 7052 -860 921 179 29 0 chr10 89998027 89998200 -50318565 + L1MA9 LINE L1 5934 6111 -201 2676 136 102 58 chr10 89998201 89998399 -50318366 + Tigger3b DNA MER2_type 2 190 -2838 2190 109 3 3 chr10 89998399 89998693 -50318072 + AluSp SINE Alu 2 295 -18 2676 136 102 58 chr10 89998693 89999045 -50317720 + Tigger3b DNA MER2_type 190 576 -655 488 65 52 0 chr10 89999046 89999123 -50317642 - Alu SINE Alu 0 309 229 1119 111 20 0 chr10 89999123 89999276 -50317489 - AluSq SINE Alu -155 158 3 3194 104 140 39 chr10 89999278 89999473 -50317292 + Tigger3b DNA MER2_type 547 721 -2308 1835 171 10 0 chr10 89999473 89999777 -50316988 + AluJb SINE Alu 1 307 -5 3194 104 140 39 chr10 89999777 90000204 -50316561 + Tigger3b DNA MER2_type 721 1232 0 263 306 0 0 chr10 90000295 90000367 -50316398 + C-rich Low_complexity Low_complexity 1 72 0 1933 131 31 10 chr10 90000520 90000811 -50315954 + AluSx SINE Alu 1 297 -15 1767 174 3 7 chr10 90001933 90002232 -50314533 + AluJb SINE Alu 1 298 -14 2390 77 0 16 chr10 90002869 90003179 -50313586 + AluY SINE Alu 1 305 -6 3110 192 119 128 chr10 90003309 90003706 -50313059 + L1MC4 LINE L1 6460 6859 -1183 692 85 32 0 chr10 90003706 90003800 -50312965 + U6 snRNA snRNA 1 97 -10 3110 192 119 128 chr10 90003800 90004749 -50312016 + L1MC4 LINE L1 6859 7886 -156 957 211 5 10 chr10 90004787 90004981 -50311784 + MER20 DNA MER1_type 23 215 -4 1853 146 21 0 chr10 90005198 90005485 -50311280 + AluSx SINE Alu 1 293 -19 2242 99 0 7 chr10 90006041 90006371 -50310394 + AluSx SINE Alu 1 312 0 2497 72 0 0 chr10 90006394 90006698 -50310067 - AluY SINE Alu -6 305 2 941 250 74 6 chr10 90006713 90007037 -50309728 + L1MC4 LINE L1 6696 7041 -1001 1018 221 133 11 chr10 90007051 90007418 -50309347 - L1MA9 LINE L1 -38 6274 5863 429 338 43 9 chr10 90007454 90007822 -50308943 + L1MC4 LINE L1 6968 7294 -514 278 268 80 29 chr10 90007869 90008007 -50308758 + L1MC5 LINE L1 7302 7446 -515 2318 70 0 17 chr10 90008037 90008337 -50308428 + AluY SINE Alu 3 297 -14 23 0 0 0 chr10 90008578 90008601 -50308164 + AT_rich Low_complexity Low_complexity 1 23 0 1056 172 10 15 chr10 90008782 90008980 -50307785 - AluJo SINE Alu -6 306 110 1964 138 0 3 chr10 90008980 90009269 -50307496 + AluSx SINE Alu 1 288 -24 3593 194 92 8 chr10 90009278 90010179 -50306586 + Charlie1a DNA MER1_type 95 1071 -384 1482 169 20 4 chr10 90010479 90010733 -50306032 + AluJb SINE Alu 35 292 -20 3243 154 55 104 chr10 90010743 90011093 -50305672 + L1MB4 LINE L1 4947 5313 -867 2114 126 3 0 chr10 90011093 90011394 -50305371 + AluSq SINE Alu 1 302 -11 3243 154 55 104 chr10 90011394 90012301 -50304464 + L1MB4 LINE L1 5313 6151 -29 1583 169 72 12 chr10 90014628 90014947 -50301818 - MER44D DNA MER2_type -1 608 1 1352 169 20 68 chr10 90016957 90017252 -50299513 - AluJo SINE Alu -31 281 1 261 257 91 94 chr10 90017286 90017562 -50299203 + L1MC/D LINE L1 5575 5849 -1959 210 189 38 0 chr10 90017977 90018030 -50298735 - MIR SINE MIR -55 153 99 2247 107 0 0 chr10 90018138 90018438 -50298327 + AluSg SINE Alu 1 300 -10 378 105 0 0 chr10 90018448 90018505 -50298260 + AluJ/FLAM SINE Alu 1 57 -245 343 287 16 49 chr10 90018593 90018715 -50298050 + L3 LINE CR1 1158 1275 -302 2287 95 0 3 chr10 90018732 90019028 -50297737 + AluY SINE Alu 2 296 -15 1830 159 0 14 chr10 90019148 90019443 -50297322 + AluSx SINE Alu 1 291 -21 365 265 83 66 chr10 90019573 90019655 -50297110 - MIR SINE MIR -11 251 172 2182 72 41 27 chr10 90019655 90019947 -50296818 + AluY SINE Alu 1 296 -15 365 265 83 66 chr10 90019947 90019972 -50296793 - MIR SINE MIR -90 172 149 879 218 173 7 chr10 90019972 90020261 -50296504 + MER46C DNA MER2_type 1 337 -1 365 265 83 66 chr10 90020261 90020333 -50296432 - MIR SINE MIR -113 149 68 234 203 0 43 chr10 90020365 90020434 -50296331 + L1ME LINE L1 5724 5789 -332 2149 105 26 13 chr10 90020784 90021090 -50295675 - AluSx SINE Alu -2 310 1 873 120 113 0 chr10 90021123 90021293 -50295472 + AluSg/x SINE Alu 135 319 0 441 219 73 26 chr10 90021366 90021517 -50295248 + L1MC4a LINE L1 5678 5835 -1973 34 96 0 0 chr10 90021517 90021621 -50295144 + AT_rich Low_complexity Low_complexity 1 104 0 1928 129 3 10 chr10 90021944 90022239 -50294526 + AluSx SINE Alu 1 293 -19 450 237 174 40 chr10 90022619 90022843 -50293922 + Charlie2 DNA MER1_type 9 262 -2520 816 155 80 194 chr10 90022911 90023167 -50293598 + Charlie2 DNA MER1_type 1862 2146 -716 1759 113 88 7 chr10 90023167 90023441 -50293324 + AluSc SINE Alu 1 296 -13 439 226 136 52 chr10 90023451 90023606 -50293159 + FAM SINE Alu 4 171 -4 816 155 80 194 chr10 90023606 90023931 -50292834 + Charlie2 DNA MER1_type 2156 2516 -346 727 157 0 79 chr10 90023931 90024071 -50292694 - FLAM_C SINE Alu -3 130 2 1916 119 84 7 chr10 90024073 90024359 -50292406 - AluSx SINE Alu -4 308 1 816 155 80 194 chr10 90024359 90024614 -50292151 + Charlie2 DNA MER1_type 2517 2616 -246 22 35 0 0 chr10 90024667 90024696 -50292069 + AT_rich Low_complexity Low_complexity 1 29 0 1252 224 95 4 chr10 90024747 90025011 -50291754 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 90025014 90025037 -50291728 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 284 297 69 7 chr10 90025069 90025214 -50291551 + L1ME3A LINE L1 6016 6169 -1 1663 160 7 56 chr10 90025265 90025571 -50291194 + AluJo SINE Alu 1 291 -21 221 250 0 0 chr10 90025789 90025853 -50290912 + A-rich Low_complexity Low_complexity 1 64 0 2392 82 7 0 chr10 90025858 90026162 -50290603 + AluSx SINE Alu 1 306 -6 627 292 221 60 chr10 90026193 90027528 -50289237 + L2 LINE L2 557 2213 -1101 2352 35 56 3 chr10 90027528 90027815 -50288950 - AluY SINE Alu -9 302 1 627 292 221 60 chr10 90027815 90028141 -50288624 + L2 LINE L2 2213 2485 -829 2172 96 0 20 chr10 90028538 90028841 -50287924 - AluSg SINE Alu -13 297 1 2459 82 3 0 chr10 90028841 90029144 -50287621 - AluSg SINE Alu -6 304 1 1479 193 34 7 chr10 90029606 90029901 -50286864 - AluJo SINE Alu -9 303 1 493 139 21 146 chr10 90029936 90030080 -50286685 + AluJo SINE Alu 11 136 -176 280 205 223 36 chr10 90030281 90030393 -50286372 + MIR SINE MIR 59 191 -71 1493 199 50 0 chr10 90030424 90030721 -50286044 + AluJb SINE Alu 1 312 0 336 262 67 91 chr10 90031460 90031670 -50285095 + L1MC5 LINE L1 7713 7917 -44 739 128 0 0 chr10 90031817 90031926 -50284839 - AluSx SINE Alu -10 299 191 911 51 8 25 chr10 90031929 90032047 -50284718 - AluSx SINE Alu -174 138 23 1652 127 81 12 chr10 90032102 90032384 -50284381 - AluSg SINE Alu 0 303 4 2182 107 0 7 chr10 90033750 90034060 -50282705 + AluSq SINE Alu 1 308 -5 229 221 88 44 chr10 90034092 90034160 -50282605 + L2 LINE L2 3243 3313 0 * 304 187 240 0 chr10 90034159 90034234 -50282531 + MIR SINE MIR 55 147 -61 1983 144 3 0 chr10 90034273 90034564 -50282201 + AluSx SINE Alu 1 292 -20 30 27 0 0 chr10 90034733 90034770 -50281995 + AT_rich Low_complexity Low_complexity 1 37 0 1546 195 7 14 chr10 90034863 90035155 -50281610 - AluJb SINE Alu -22 290 1 182 239 65 0 chr10 90035322 90035368 -50281397 - MIR SINE MIR -136 126 78 2223 79 3 16 chr10 90035831 90036134 -50280631 - AluY SINE Alu -12 299 1 1773 155 14 14 chr10 90036358 90036654 -50280111 - AluJb SINE Alu -16 296 1 27 29 0 0 chr10 90036689 90036723 -50280042 + AT_rich Low_complexity Low_complexity 1 34 0 1231 137 15 29 chr10 90036839 90036973 -50279792 + AluSq SINE Alu 2 133 -180 2216 97 0 10 chr10 90036973 90037292 -50279473 + AluSx SINE Alu 1 312 0 1231 137 15 29 chr10 90037292 90037362 -50279403 + AluSq SINE Alu 133 203 -110 2547 68 0 0 chr10 90037398 90037705 -50279060 - AluY SINE Alu -3 308 2 894 256 29 8 chr10 90037724 90038044 -50278721 + L1MC4 LINE L1 6666 7041 -1001 1018 221 133 11 chr10 90038058 90038425 -50278340 - L1MA9 LINE L1 -38 6274 5863 429 338 43 9 chr10 90038461 90038829 -50277936 + L1MC4 LINE L1 6968 7294 -514 278 268 80 29 chr10 90038876 90039014 -50277751 + L1MC5 LINE L1 7302 7446 -515 2318 70 0 17 chr10 90039044 90039344 -50277421 + AluY SINE Alu 3 297 -14 23 0 0 0 chr10 90039585 90039608 -50277157 + AT_rich Low_complexity Low_complexity 1 23 0 1056 172 10 15 chr10 90039789 90039987 -50276778 - AluJo SINE Alu -6 306 110 1964 138 0 3 chr10 90039987 90040276 -50276489 + AluSx SINE Alu 1 288 -24 3593 194 92 8 chr10 90040285 90041186 -50275579 + Charlie1a DNA MER1_type 95 1071 -384 1482 169 20 4 chr10 90041486 90041740 -50275025 + AluJb SINE Alu 35 292 -20 3243 154 55 104 chr10 90041750 90042100 -50274665 + L1MB4 LINE L1 4947 5313 -867 2114 126 3 0 chr10 90042100 90042401 -50274364 + AluSq SINE Alu 1 302 -11 3243 154 55 104 chr10 90042401 90043308 -50273457 + L1MB4 LINE L1 5313 6151 -29 1583 169 72 12 chr10 90045635 90045954 -50270811 - MER44D DNA MER2_type -1 608 1 1352 169 20 68 chr10 90047964 90048259 -50268506 - AluJo SINE Alu -31 281 1 261 257 91 94 chr10 90048293 90048569 -50268196 + L1MC/D LINE L1 5575 5849 -1959 210 189 38 0 chr10 90048984 90049037 -50267728 - MIR SINE MIR -55 153 99 2247 107 0 0 chr10 90049145 90049445 -50267320 + AluSg SINE Alu 1 300 -10 378 105 0 0 chr10 90049455 90049512 -50267253 + AluJ/FLAM SINE Alu 1 57 -245 343 287 16 49 chr10 90049600 90049722 -50267043 + L3 LINE CR1 1158 1275 -302 2287 95 0 3 chr10 90049739 90050035 -50266730 + AluY SINE Alu 2 296 -15 1830 159 0 14 chr10 90050155 90050450 -50266315 + AluSx SINE Alu 1 291 -21 365 265 83 66 chr10 90050580 90050662 -50266103 - MIR SINE MIR -11 251 172 2147 72 41 31 chr10 90050662 90050955 -50265810 + AluY SINE Alu 1 296 -15 365 265 83 66 chr10 90050955 90050980 -50265785 - MIR SINE MIR -90 172 149 879 218 173 7 chr10 90050980 90051269 -50265496 + MER46C DNA MER2_type 1 337 -1 365 265 83 66 chr10 90051269 90051341 -50265424 - MIR SINE MIR -113 149 68 234 203 0 43 chr10 90051373 90051442 -50265323 + L1ME LINE L1 5724 5789 -332 1439 94 38 19 chr10 90051792 90052005 -50264760 - AluSg/x SINE Alu -2 310 94 2677 190 44 26 chr10 90102057 90103245 -50213520 - L1 LINE L1 -1724 4422 2962 252 0 0 0 chr10 90104709 90104737 -50212028 + (GA)n Simple_repeat Simple_repeat 2 29 0 663 62 49 9 chr10 90104913 90105054 -50211711 + LTR17 LTR ERV1 589 780 0 308 273 11 0 chr10 90105241 90105329 -50211436 - L1MC5 LINE L1 -66 7895 7807 2232 114 3 7 chr10 90105428 90105727 -50211038 - AluSx SINE Alu -14 298 1 192 77 0 0 chr10 90106275 90106301 -50210464 + (T)n Simple_repeat Simple_repeat 1 26 0 225 286 0 0 chr10 90107082 90107138 -50209627 - L3b LINE CR1 -196 1387 1332 1517 98 62 5 chr10 90107639 90107863 -50208902 + AluSx SINE Alu 59 295 -17 591 100 0 30 chr10 90112259 90112359 -50204406 + AluSp/q SINE Alu 209 305 -8 629 198 4 153 chr10 90112406 90112648 -50204117 + MLT1B LTR MaLR 185 390 0 1892 120 0 4 chr10 90112870 90113137 -50203628 + AluSx SINE Alu 1 266 -46 258 333 11 0 chr10 90113277 90113370 -50203395 - HERVR LTR ERV1 -3220 4172 4079 302 305 37 26 chr10 90113840 90114030 -50202735 - HERVR LTR ERV1 -4377 4049 3858 1843 171 13 0 chr10 90114044 90114342 -50202423 - AluJb SINE Alu -7 305 4 1829 129 28 7 chr10 90116755 90117041 -50199724 - AluJo SINE Alu -15 297 6 219 316 197 7 chr10 90117619 90117771 -50198994 - MIR SINE MIR -29 233 53 611 127 42 0 chr10 90118966 90119084 -50197681 - AluJb SINE Alu 0 312 190 257 313 36 9 chr10 90119598 90119710 -50197055 + MIR SINE MIR 115 229 -33 591 219 48 7 chr10 90120242 90120388 -50196377 - MIR SINE MIR -77 185 34 314 328 9 9 chr10 90121319 90121435 -50195330 - MIR SINE MIR -69 139 24 184 271 57 14 chr10 90121573 90121643 -50195122 + MIR3 SINE MIR 3 75 -133 211 216 0 20 chr10 90123742 90123793 -50192972 - MIR SINE MIR -154 108 59 1196 137 33 0 chr10 90126731 90126914 -50189851 - AluSg SINE Alu -121 189 1 1024 167 17 0 chr10 90126915 90127095 -50189670 - MLT1B LTR MaLR -207 183 1 1145 128 101 27 chr10 90127104 90127323 -50189442 - MSTA LTR MaLR 0 428 194 7593 27 0 1 chr10 90127323 90128856 -50187909 - L1PA4 LINE L1 0 6155 4660 198 0 0 0 chr10 90129448 90129470 -50187295 + (GGCTG)n Simple_repeat Simple_repeat 3 24 0 328 309 55 0 chr10 90130260 90130370 -50186395 + LTR33A LTR ERVL 30 145 -378 238 269 26 13 chr10 90130499 90130577 -50186188 + LTR33A LTR ERVL 318 396 -127 1854 122 11 0 chr10 90131883 90132181 -50184584 + AluSx SINE Alu 11 311 0 223 170 0 21 chr10 90133387 90133434 -50183331 + C-rich Low_complexity Low_complexity 5 50 0 332 246 46 18 chr10 90134967 90135101 -50181664 + MIR SINE MIR 1 142 -66 2202 116 3 3 chr10 90137973 90138284 -50178481 + AluSx SINE Alu 1 311 -1 331 323 43 32 chr10 90138395 90138581 -50178184 + MIR SINE MIR 47 234 -28 409 205 18 107 chr10 90138675 90138787 -50177978 - MER5B DNA MER1_type -31 147 46 750 241 55 30 chr10 90139150 90139386 -50177379 + Charlie4a DNA MER1_type 84 325 -183 279 291 0 13 chr10 90141604 90141683 -50175082 + MIR SINE MIR 32 109 -153 2238 137 41 22 chr10 90141802 90142217 -50174548 + L1MD1 LINE L1 5819 6241 -1 2316 68 3 19 chr10 90142220 90142527 -50174238 + AluSg SINE Alu 1 302 -8 436 93 0 0 chr10 90142527 90142581 -50174184 + (TA)n Simple_repeat Simple_repeat 2 55 0 2936 176 142 3 chr10 90142581 90143227 -50173538 + L1MB7 LINE L1 5427 6162 -22 676 273 44 55 chr10 90143289 90143560 -50173205 + Charlie2 DNA MER1_type 1856 2123 -739 2343 57 3 3 chr10 90143560 90143856 -50172909 - AluY SINE Alu -15 296 1 21 36 0 0 chr10 90144201 90144229 -50172536 + AT_rich Low_complexity Low_complexity 1 28 0 737 154 98 38 chr10 90144494 90144709 -50172056 + MER33 DNA MER1_type 1 233 -91 715 127 110 25 chr10 90144711 90144829 -50171936 + FLAM_C SINE Alu 2 129 -14 291 119 17 0 chr10 90144830 90144889 -50171876 + MER33 DNA MER1_type 228 287 -37 2333 82 7 0 chr10 90144974 90145277 -50171488 + AluSg SINE Alu 1 305 -5 322 206 0 0 chr10 90145373 90145436 -50171329 + MER103 DNA DNA 52 114 -52 331 267 147 90 chr10 90145476 90145742 -50171023 - L1ME4a LINE L1 -4 6117 5837 1530 163 14 28 chr10 90145755 90146043 -50170722 - AluJo SINE Alu -13 299 16 228 35 0 0 chr10 90146178 90146207 -50170558 + (A)n Simple_repeat Simple_repeat 1 29 0 194 0 0 114 chr10 90146211 90146246 -50170519 + (C)n Simple_repeat Simple_repeat 1 31 0 439 154 0 106 chr10 90146435 90146539 -50170226 + AluJ/FRAM SINE Alu 220 312 0 334 209 15 0 chr10 90146544 90146611 -50170154 + Charlie4 DNA MER1_type 1889 1956 -5 1575 227 56 48 chr10 90147667 90148245 -50168520 + LTR24B LTR ERV1 1 635 0 888 266 26 54 chr10 90148245 90148626 -50168139 + LTR24B-int LTR ERV1 1 507 -4616 1728 161 3 10 chr10 90148626 90148918 -50167847 + AluSx SINE Alu 1 290 -22 888 266 26 54 chr10 90148918 90149062 -50167703 + LTR24B-int LTR ERV1 507 654 -4469 400 354 73 24 chr10 90149124 90149370 -50167395 + MER4B-int LTR ERV1 402 659 -6099 1819 155 0 10 chr10 90149412 90149721 -50167044 + AluSg SINE Alu 1 306 -4 289 279 0 0 chr10 90149750 90149829 -50166936 + MER4B-int LTR ERV1 667 745 -4378 21 0 0 0 chr10 90150973 90150994 -50165771 + GC_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr10 90151131 90151188 -50165577 + GC_rich Low_complexity Low_complexity 1 57 0 23 78 0 0 chr10 90151213 90151264 -50165501 + GC_rich Low_complexity Low_complexity 1 51 0 431 211 234 8 chr10 90152376 90152504 -50164261 - MIR SINE MIR -59 203 47 204 263 127 34 chr10 90153579 90153697 -50163068 - L2 LINE L2 -50 3263 3135 319 282 130 57 chr10 90153879 90154141 -50162624 - L1M4c LINE L1 -5167 1217 937 399 359 30 4 chr10 90154318 90154580 -50162185 - L1M4 LINE L1 -2482 3664 3396 189 0 0 0 chr10 90154847 90154868 -50161897 + (T)n Simple_repeat Simple_repeat 1 21 0 1827 126 61 0 chr10 90154899 90155193 -50161572 - AluSx SINE Alu 0 312 1 513 204 88 15 chr10 90155558 90155695 -50161070 - MER104 DNA Tc2 -27 153 7 1013 32 103 0 chr10 90156229 90156355 -50160410 - MER85 DNA T2_type 0 139 1 592 301 71 21 chr10 90156414 90156696 -50160069 - L2 LINE L2 -830 2484 2189 355 255 169 71 chr10 90156710 90156894 -50159871 - MLT1K LTR MaLR -16 572 371 2055 110 3 3 chr10 90157016 90157316 -50159449 - AluSx SINE Alu -12 300 1 2317 85 3 0 chr10 90157557 90157851 -50158914 - AluSg SINE Alu -15 295 1 2460 57 3 3 chr10 90158448 90158748 -50158017 - AluY SINE Alu -11 300 1 21 36 0 0 chr10 90159092 90159120 -50157645 + AT_rich Low_complexity Low_complexity 1 28 0 904 142 109 52 chr10 90159393 90159599 -50157166 + MER33 DNA MER1_type 6 232 -2353 695 126 109 25 chr10 90159599 90159718 -50157047 + FLAM_C SINE Alu 1 129 -4 904 142 109 52 chr10 90159718 90159778 -50156987 + MER33 DNA MER1_type 232 287 -37 2426 82 7 0 chr10 90159863 90160166 -50156599 + AluSg SINE Alu 1 305 -5 323 206 0 0 chr10 90160262 90160325 -50156440 + MER103 DNA DNA 52 114 -52 1636 171 16 36 chr10 90160644 90160949 -50155816 - AluJo SINE Alu -13 299 1 327 324 80 29 chr10 90160957 90161275 -50155490 - L1MC/D LINE L1 -320 5801 5501 1568 58 48 14 chr10 90161275 90161483 -50155282 - AluY SINE Alu -14 297 83 2231 105 0 0 chr10 90161483 90161779 -50154986 - AluSc SINE Alu -13 296 1 327 324 80 29 chr10 90161779 90161822 -50154943 - L1MC/D LINE L1 -619 5502 5448 1808 167 7 0 chr10 90162064 90162346 -50154419 + AluJo SINE Alu 11 294 -18 639 230 53 32 chr10 90163432 90163619 -50153146 + MIR SINE MIR 65 255 -7 787 181 0 39 chr10 90163941 90164096 -50152669 + FAM SINE Alu 22 170 -15 1746 157 11 0 chr10 90164667 90164947 -50151818 + AluJb SINE Alu 1 283 -29 741 167 30 0 chr10 90164947 90165079 -50151686 + AluJo/FRAM SINE Alu 161 296 -16 943 203 21 11 chr10 90166091 90166278 -50150487 - MIR SINE MIR -73 189 1 198 0 0 0 chr10 90166413 90166435 -50150330 + (ATTG)n Simple_repeat Simple_repeat 4 25 0 690 205 12 54 chr10 90166437 90166603 -50150162 - AluJb SINE Alu -34 278 120 2532 63 0 0 chr10 90166784 90167087 -50149678 - AluY SINE Alu -8 303 1 255 250 83 38 chr10 90167464 90167596 -50149169 - L1ME4a LINE L1 0 6121 5984 2272 106 3 13 chr10 90167964 90168275 -50148490 + AluSx SINE Alu 1 308 -4 2349 87 7 0 chr10 90168509 90168807 -50147958 - AluSx SINE Alu -12 300 1 735 317 111 56 chr10 90169044 90169933 -50146832 + L1M4 LINE L1 3424 4361 -1785 1362 222 92 12 chr10 90170733 90171156 -50145609 - Charlie4a DNA MER1_type -51 457 1 1753 268 113 53 chr10 90171161 90171946 -50144819 + L2 LINE L2 357 1188 -2126 1722 174 10 13 chr10 90171956 90172255 -50144510 + AluJb SINE Alu 3 300 -12 286 157 48 24 chr10 90172260 90172343 -50144422 - L1MB1 LINE L1 -52 6137 6053 2190 103 24 0 chr10 90172389 90172681 -50144084 + AluSp SINE Alu 1 299 -14 316 130 0 0 chr10 90172725 90172779 -50143986 - L1MA5A LINE L1 -22 6275 6222 841 145 35 7 chr10 90172781 90172926 -50143839 - MER30 DNA MER1_type 0 230 82 29 0 0 0 chr10 90172942 90172971 -50143794 + AT_rich Low_complexity Low_complexity 1 29 0 734 189 8 0 chr10 90172975 90173097 -50143668 - AluSq/x SINE Alu -187 126 4 616 74 0 0 chr10 90173104 90173185 -50143580 - MER30 DNA MER1_type -148 82 2 2111 111 67 18 chr10 90173187 90173574 -50143191 - L1MA5A LINE L1 -71 6226 5821 816 188 0 0 chr10 90173592 90173725 -50143040 - AluSq/x SINE Alu -180 133 1 1646 166 32 9 chr10 90173727 90174065 -50142700 - L1MA5A LINE L1 -468 5829 5484 482 53 13 0 chr10 90174098 90174174 -50142591 - L1MA5A LINE L1 -965 5332 5256 505 49 111 0 chr10 90174180 90174261 -50142504 - L1M1 LINE L1 -818 5482 5393 1618 201 0 7 chr10 90174261 90174559 -50142206 - AluJo SINE Alu -16 296 1 705 209 19 25 chr10 90174560 90174718 -50142047 - FRAM SINE Alu -11 165 9 2265 182 29 122 chr10 90174736 90175100 -50141665 - L1 LINE L1 -758 5388 4992 2390 57 0 20 chr10 90175100 90175396 -50141369 - AluSg SINE Alu -20 290 1 2265 182 29 122 chr10 90175396 90175479 -50141286 - L1 LINE L1 -1154 4992 4903 301 103 17 0 chr10 90175479 90175537 -50141228 - Charlie5 DNA MER1_type -63 2549 2491 939 156 167 85 chr10 90175540 90175810 -50140955 - AluSg SINE Alu -7 293 2 2265 182 29 122 chr10 90175810 90176271 -50140494 - L1 LINE L1 -1245 4901 4558 * 8365 194 109 32 chr10 90176260 90176511 -50140254 - L1MB2 LINE L1 -95 6076 5846 2285 88 16 13 chr10 90176511 90176819 -50139946 - AluSx SINE Alu -3 309 1 8365 194 109 32 chr10 90176819 90178245 -50138520 - L1MB2 LINE L1 -325 5846 4530 1382 158 158 0 chr10 90178245 90178504 -50138261 - AluJo SINE Alu -2 300 1 8365 194 109 32 chr10 90178504 90179957 -50136808 - L1MB2 LINE L1 -1641 4530 2649 2054 116 13 3 chr10 90179957 90180258 -50136507 - AluSp SINE Alu -9 304 1 8365 194 109 32 chr10 90180258 90180460 -50136305 - L1MB2 LINE L1 -3522 2649 2464 1785 267 241 28 chr10 90180460 90181471 -50135294 + L2 LINE L2 1147 2373 -941 1819 143 159 8 chr10 90182271 90182643 -50134122 - MSTA LTR MaLR 0 428 1 406 237 53 61 chr10 90183144 90183268 -50133497 + Charlie2 DNA MER1_type 46 169 -2613 2079 126 3 3 chr10 90183268 90183561 -50133204 - AluSq SINE Alu -18 295 3 406 237 53 61 chr10 90183561 90183681 -50133084 + Charlie2 DNA MER1_type 169 288 -2494 3363 178 102 20 chr10 90183682 90184087 -50132678 + L1MB7 LINE L1 4860 5231 -953 2204 129 0 3 chr10 90184087 90184390 -50132375 + AluSx SINE Alu 1 302 -10 3363 178 102 20 chr10 90184390 90184531 -50132234 + L1MB7 LINE L1 5231 5359 -825 2474 64 0 19 chr10 90184531 90184845 -50131920 + AluY SINE Alu 1 308 -3 432 0 0 0 chr10 90184845 90184893 -50131872 + (TA)n Simple_repeat Simple_repeat 2 49 0 3363 178 102 20 chr10 90184893 90185539 -50131226 + L1MB7 LINE L1 5358 6162 -22 840 236 60 86 chr10 90185601 90185872 -50130893 + Charlie2 DNA MER1_type 1856 2113 -749 2336 81 0 3 chr10 90185872 90186168 -50130597 - AluSg SINE Alu -15 295 1 840 236 60 86 chr10 90186168 90186328 -50130437 + Charlie2 DNA MER1_type 2113 2276 -586 423 149 0 0 chr10 90186328 90186402 -50130363 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 1594 140 22 18 chr10 90186403 90186675 -50130090 - AluSx SINE Alu -39 273 1 277 211 12 88 chr10 90186675 90186720 -50130045 + Charlie2 DNA MER1_type 2258 2305 -557 2134 133 3 0 chr10 90186720 90187021 -50129744 - AluSc SINE Alu -7 302 1 277 211 12 88 chr10 90187021 90187146 -50129619 + Charlie2 DNA MER1_type 2305 2415 -447 863 160 0 0 chr10 90187170 90187301 -50129464 + FLAM_C SINE Alu 1 131 -12 400 205 256 5 chr10 90187313 90187508 -50129257 + Charlie2 DNA MER1_type 2450 2693 -169 269 268 49 0 chr10 90187508 90187590 -50129175 + MIR SINE MIR 87 172 -90 2185 78 57 0 chr10 90188022 90188304 -50128461 - AluSq SINE Alu -15 298 1 1722 190 55 39 chr10 90188364 90188853 -50127912 - MLT1D LTR MaLR -8 497 1 278 267 86 19 chr10 90188939 90189044 -50127721 + MIR SINE MIR 42 153 -109 212 219 178 27 chr10 90189112 90189185 -50127580 + MIR SINE MIR 106 189 -73 183 152 0 0 chr10 90189465 90189511 -50127254 + (TA)n Simple_repeat Simple_repeat 1 46 0 2127 119 3 0 chr10 90189512 90189807 -50126958 - AluSp SINE Alu -17 296 1 21 36 0 0 chr10 90189814 90189842 -50126923 + AT_rich Low_complexity Low_complexity 1 28 0 360 0 0 0 chr10 90191147 90191187 -50125578 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1203 195 18 0 chr10 90191223 90191444 -50125321 - AluJb SINE Alu -2 310 86 2403 70 6 13 chr10 90191711 90191888 -50124877 - AluSx SINE Alu 0 312 136 2075 130 0 7 chr10 90191888 90192187 -50124578 - AluSg SINE Alu -13 297 1 2403 70 6 13 chr10 90192187 90192323 -50124442 - AluSx SINE Alu -176 136 1 28 48 0 0 chr10 90192546 90192588 -50124177 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 90193051 90193074 -50123691 + AT_rich Low_complexity Low_complexity 1 23 0 276 267 69 26 chr10 90193951 90194067 -50122698 + MIR SINE MIR 129 249 -13 475 105 47 0 chr10 90194107 90194193 -50122572 + CT-rich Low_complexity Low_complexity 3 92 0 1579 184 50 0 chr10 90194196 90194478 -50122287 - AluJb SINE Alu 0 312 17 661 243 78 23 chr10 90194699 90194917 -50121848 + Charlie8 DNA MER1_type 4 233 -2184 318 321 143 0 chr10 90195007 90195044 -50121721 + Charlie8 DNA MER1_type 368 398 -2019 2334 88 10 3 chr10 90195044 90195349 -50121416 - AluSq SINE Alu -6 307 1 318 321 143 0 chr10 90195349 90195576 -50121189 + Charlie8 DNA MER1_type 398 670 -1747 1728 154 20 23 chr10 90195792 90196097 -50120668 - AluJb SINE Alu -8 304 1 2245 72 3 7 chr10 90196375 90196666 -50120099 - AluY SINE Alu -17 294 5 433 157 15 3 chr10 90197483 90197681 -50119084 + AluJo SINE Alu 39 302 -10 567 192 67 8 chr10 90197909 90198029 -50118736 - FLAM_C SINE Alu -16 127 1 483 287 214 17 chr10 90198139 90198828 -50117937 - L1M4 LINE L1 -1112 5034 4191 1973 132 28 0 chr10 90198901 90199189 -50117576 - AluSx SINE Alu -16 296 1 370 145 58 0 chr10 90199200 90199269 -50117496 - MLT1B LTR MaLR -290 100 28 198 0 0 0 chr10 90199449 90199471 -50117294 + (T)n Simple_repeat Simple_repeat 1 22 0 887 240 104 56 chr10 90199501 90199876 -50116889 - MLT1C LTR MaLR -47 420 28 3250 240 57 51 chr10 90199888 90200034 -50116731 - L1MC4 LINE L1 -3 8039 7895 252 0 0 0 chr10 90200034 90200062 -50116703 + (CA)n Simple_repeat Simple_repeat 2 29 0 3250 240 57 51 chr10 90200062 90200113 -50116652 - L1MC4 LINE L1 -147 7895 7846 2332 102 0 0 chr10 90200113 90200417 -50116348 - AluY SINE Alu -7 304 1 3250 240 57 51 chr10 90200417 90201219 -50115546 - L1MC4 LINE L1 -196 7846 7027 1427 178 31 24 chr10 90201219 90201506 -50115259 - AluJb SINE Alu -23 289 1 3250 240 57 51 chr10 90201506 90201835 -50114930 - L1MC4 LINE L1 -1015 7027 6701 23 0 0 0 chr10 90201964 90201987 -50114778 + AT_rich Low_complexity Low_complexity 1 23 0 1777 190 0 16 chr10 90202029 90202339 -50114426 - AluJo SINE Alu -7 305 1 1779 139 0 0 chr10 90202427 90202678 -50114087 - AluSx SINE Alu -16 296 46 1269 224 53 13 chr10 90202679 90203135 -50113630 - L1M4 LINE L1 -2609 3537 3064 250 310 240 0 chr10 90203189 90203318 -50113447 + MIR SINE MIR 17 176 -86 805 126 0 7 chr10 90203808 90203943 -50112822 - L1MB4 LINE L1 -13 6167 6034 1957 152 0 14 chr10 90203954 90204250 -50112515 - AluJb SINE Alu -20 292 1 655 188 38 0 chr10 90204261 90204394 -50112371 - FLAM_C SINE Alu 0 143 6 2525 198 52 34 chr10 90204395 90204640 -50112125 - L1MB7 LINE L1 -140 6044 5805 2232 88 0 34 chr10 90204640 90204937 -50111828 - AluSx SINE Alu -25 287 1 2525 198 52 34 chr10 90204937 90205549 -50111216 - L1MB7 LINE L1 -379 5805 5171 558 146 0 0 chr10 90205574 90205656 -50111109 - AluSq/x SINE Alu -184 129 48 2058 148 0 0 chr10 90205684 90205995 -50110770 - AluSx SINE Alu -1 311 1 324 164 14 41 chr10 90205998 90206071 -50110694 - L1MB7 LINE L1 -976 5170 5100 749 214 98 65 chr10 90206071 90206469 -50110296 - L1MC5 LINE L1 -430 7531 7121 27 0 0 0 chr10 90206470 90206497 -50110268 + AT_rich Low_complexity Low_complexity 1 27 0 1132 207 0 9 chr10 90206497 90206710 -50110055 + AluJo SINE Alu 44 254 -58 925 233 125 15 chr10 90206745 90207210 -50109555 - L1MC4 LINE L1 -1659 6126 5616 786 200 72 118 chr10 90207246 90207291 -50109474 - L1MC5 LINE L1 -894 7067 7021 2118 151 28 28 chr10 90207291 90207715 -50109050 - L1MC1 LINE L1 0 6333 5910 786 200 72 118 chr10 90207715 90208125 -50108640 - L1MC5 LINE L1 -940 7021 6633 506 268 116 25 chr10 90208489 90208843 -50107922 - HAL1b LINE L1 -725 623 238 457 175 12 0 chr10 90208855 90208935 -50107830 - AluJ/FLAM SINE Alu -211 101 21 2227 115 3 0 chr10 90209435 90209739 -50107026 - AluSg SINE Alu -5 305 1 476 254 94 64 chr10 90210400 90210780 -50105985 + MLT1I LTR MaLR 1 392 -17 1057 150 139 8 chr10 90210780 90211047 -50105718 + MER33 DNA MER1_type 1 302 -22 512 305 78 67 chr10 90211090 90211552 -50105213 + HAL1 LINE L1 416 882 -1625 2525 150 22 27 chr10 90211731 90212219 -50104546 - L1MB3 LINE L1 -13 6170 5685 1579 196 37 25 chr10 90212220 90212628 -50104137 + L1 LINE L1 3341 3753 -2393 2182 112 0 0 chr10 90212686 90212973 -50103792 - AluSg SINE Alu -23 287 1 223 317 30 40 chr10 90213395 90213496 -50103269 + MIR SINE MIR 13 112 -150 320 234 32 89 chr10 90213513 90213637 -50103128 + L2 LINE L2 3192 3308 -5 227 261 22 65 chr10 90213641 90213733 -50103032 + MIR SINE MIR 151 238 -24 213 39 0 0 chr10 90213812 90213838 -50102927 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2047 92 57 0 chr10 90213972 90214255 -50102510 - AluSg SINE Alu -11 299 1 1639 185 7 17 chr10 90214695 90214997 -50101768 - AluJb SINE Alu -11 301 3 664 233 101 13 chr10 90215811 90216010 -50100755 + MIR SINE MIR 27 238 -24 1673 130 13 82 chr10 90216469 90216784 -50099981 - AluJb SINE Alu -19 293 1 591 120 46 19 chr10 90217005 90217113 -50099652 - L1MB8 LINE L1 -6 6172 6062 866 233 0 125 chr10 90217144 90217283 -50099482 + MIR SINE MIR 4 88 -174 2244 99 26 0 chr10 90217283 90217585 -50099180 - AluSx SINE Alu -2 310 1 866 233 0 125 chr10 90217585 90217741 -50099024 + MIR SINE MIR 88 262 0 631 177 268 40 chr10 90217948 90218146 -50098619 - MIR SINE MIR 0 262 20 279 0 0 0 chr10 90218738 90218769 -50097996 + (TG)n Simple_repeat Simple_repeat 2 32 0 938 173 5 38 chr10 90219742 90219927 -50096838 - AluJb SINE Alu 0 312 134 219 36 0 0 chr10 90220126 90220154 -50096611 + (TG)n Simple_repeat Simple_repeat 1 28 0 1616 197 14 14 chr10 90220154 90220433 -50096332 - AluJb SINE Alu -33 279 1 555 245 71 59 chr10 90220648 90220970 -50095795 - L1MC4 LINE L1 -27 8015 7690 240 222 97 28 chr10 90221043 90221068 -50095697 - L1MC4 LINE L1 -364 7678 7656 270 0 0 0 chr10 90221068 90221098 -50095667 + (CA)n Simple_repeat Simple_repeat 2 31 0 240 222 97 28 chr10 90221098 90221144 -50095621 - L1MC4 LINE L1 -386 7656 7602 26 30 0 0 chr10 90221561 90221594 -50095171 + AT_rich Low_complexity Low_complexity 1 33 0 214 191 21 0 chr10 90221636 90221683 -50095082 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 499 257 56 85 chr10 90221889 90222267 -50094498 - L1ME3A LINE L1 -221 5949 5583 2121 131 0 0 chr10 90222528 90222818 -50093947 + AluSg SINE Alu 1 290 -20 23 33 0 0 chr10 90223439 90223469 -50093296 + AT_rich Low_complexity Low_complexity 1 30 0 2647 201 107 49 chr10 90223990 90224573 -50092192 - L1MD1 LINE L1 -10 6232 5684 2359 150 48 25 chr10 90224573 90225047 -50091718 - MER31A LTR ERV1 0 485 1 2647 201 107 49 chr10 90225047 90225539 -50091226 - L1MD1 LINE L1 -558 5684 5098 1095 164 70 59 chr10 90225534 90225820 -50090945 - L1MB7 LINE L1 -171 6013 5725 * 1796 164 3 30 chr10 90226132 90226431 -50090334 + AluJo SINE Alu 3 293 -19 217 200 14 114 chr10 90226541 90226611 -50090154 - L2 LINE L2 -22 3291 3229 2268 106 0 3 chr10 90226842 90227143 -50089622 + AluSg SINE Alu 1 300 -10 1216 218 154 7 chr10 90227206 90227614 -50089151 - L1MB8 LINE L1 -116 6062 5595 1003 188 18 0 chr10 90227617 90227787 -50088978 + AluJb SINE Alu 131 303 -9 863 189 58 0 chr10 90227791 90227981 -50088784 - L1MB8 LINE L1 -596 5582 5382 232 333 29 20 chr10 90228351 90228453 -50088312 - L2 LINE L2 -1024 2290 2188 646 261 168 48 chr10 90228497 90228873 -50087892 - MLT1L LTR MaLR -49 566 146 983 140 0 0 chr10 90229777 90229920 -50086845 + AluJb SINE Alu 169 311 -1 2263 75 48 0 chr10 90229942 90230236 -50086529 + AluSg SINE Alu 3 310 0 233 54 54 0 chr10 90231096 90231133 -50085632 - L1PA8 LINE L1 -9 6163 6125 992 132 0 0 chr10 90231172 90231308 -50085457 + AluSq/x SINE Alu 1 136 -176 1852 183 0 0 chr10 90231309 90231609 -50085156 + AluJb SINE Alu 3 302 -10 354 23 0 0 chr10 90231888 90231931 -50084834 + (TG)n Simple_repeat Simple_repeat 2 44 0 712 87 0 0 chr10 90231934 90232026 -50084739 - AluS SINE Alu -221 92 1 654 112 0 0 chr10 90232801 90232890 -50083875 + AluSg/x SINE Alu 199 287 -25 2021 141 0 0 chr10 90233987 90234270 -50082495 + AluSx SINE Alu 21 303 -9 1736 144 67 28 chr10 90234333 90234618 -50082147 - AluJo SINE Alu -16 296 1 197 385 144 23 chr10 90235019 90235635 -50081130 + L2 LINE L2 1969 2659 -655 311 253 35 35 chr10 90235775 90235862 -50080903 - L2 LINE L2 -1 3312 3226 237 289 44 22 chr10 90236136 90236226 -50080539 - L2 LINE L2 -213 3059 2968 1947 176 51 21 chr10 90236226 90237008 -50079757 + MER21B LTR ERV1 1 861 -2 236 372 67 48 chr10 90237060 90237297 -50079468 - L2 LINE L2 -384 2930 2684 2133 131 39 28 chr10 90237297 90237656 -50079109 - THE1B LTR MaLR 0 364 2 236 372 67 48 chr10 90237656 90237749 -50079016 - L2 LINE L2 -630 2684 2594 195 282 103 13 chr10 90238267 90238345 -50078420 - L2 LINE L2 -211 3061 2977 205 372 20 41 chr10 90238398 90238594 -50078171 - L2 LINE L2 -570 2744 2553 194 0 39 0 chr10 90239426 90239452 -50077313 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1911 102 4 0 chr10 90239452 90239698 -50077067 - AluSq SINE Alu -32 281 35 229 329 0 27 chr10 90239710 90239783 -50076982 + MIR SINE MIR 2 72 -190 695 288 88 18 chr10 90239783 90240123 -50076642 - LTR16C LTR ERVL -3 488 125 2532 55 0 0 chr10 90240375 90240666 -50076099 + AluY SINE Alu 4 294 -17 189 74 0 0 chr10 90240667 90240694 -50076071 + (TA)n Simple_repeat Simple_repeat 2 28 0 319 315 53 29 chr10 90240875 90241169 -50075596 - HERVL LTR ERVL -1436 4218 3954 1203 113 0 0 chr10 90241198 90241357 -50075408 + AluSg/x SINE Alu 124 282 -30 180 0 0 0 chr10 90241628 90241648 -50075117 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1093 101 0 0 chr10 90241673 90241811 -50074954 - AluSq/x SINE Alu -175 138 1 22 35 0 0 chr10 90242195 90242224 -50074541 + AT_rich Low_complexity Low_complexity 1 29 0 595 116 0 0 chr10 90242224 90242310 -50074455 + AluJ/FLAM SINE Alu 1 86 -226 2020 136 0 3 chr10 90242592 90242887 -50073878 - AluSg SINE Alu -16 294 1 383 274 74 15 chr10 90242907 90243042 -50073723 + MIR SINE MIR 120 262 0 354 205 70 82 chr10 90243099 90243270 -50073495 - L1M4 LINE L1 -2860 3286 3118 323 387 110 16 chr10 90243452 90243816 -50072949 + L2 LINE L2 2424 2821 -493 297 360 54 15 chr10 90243911 90244114 -50072651 + L2 LINE L2 2872 3082 -190 352 229 67 38 chr10 90244294 90244399 -50072366 - MER3 DNA MER1_type -96 113 6 195 219 24 0 chr10 90244402 90244443 -50072322 + L2 LINE L2 3215 3256 -16 2318 95 3 0 chr10 90244695 90244989 -50071776 + AluSx SINE Alu 1 295 -17 182 248 396 10 chr10 90245077 90245178 -50071587 - MER5A DNA MER1_type -3 186 47 1001 138 0 26 chr10 90245284 90245456 -50071309 - FRAM SINE Alu 0 168 1 21 36 0 0 chr10 90245974 90246002 -50070763 + AT_rich Low_complexity Low_complexity 1 28 0 230 283 131 20 chr10 90246084 90246183 -50070582 + L2 LINE L2 3199 3308 -5 773 195 67 0 chr10 90246603 90246752 -50070013 + AluJb SINE Alu 136 294 -18 384 312 156 13 chr10 90246795 90247026 -50069739 + L1 LINE L1 2690 2953 -3193 1027 219 14 14 chr10 90247027 90247237 -50069528 + AluJb SINE Alu 86 295 -17 764 257 45 10 chr10 90247379 90247581 -50069184 - MIR SINE MIR -1 261 53 273 265 146 19 chr10 90247595 90247904 -50068861 + L1 LINE L1 3162 3509 -2637 8326 70 5 0 chr10 90248205 90249271 -50067494 - MER11C LTR ERVK 0 1071 1 1662 129 119 0 chr10 90249581 90249859 -50066906 - AluSx SINE Alu 0 312 2 711 253 130 79 chr10 90251344 90251889 -50064876 - MER21B LTR ERV1 -150 713 141 318 258 38 36 chr10 90251910 90252055 -50064710 - MER77 LTR ERV1 -406 199 13 1311 196 185 20 chr10 90252103 90252460 -50064305 - MLT1F1 LTR MaLR 0 567 152 681 133 0 55 chr10 90252473 90252601 -50064164 - FLAM_C SINE Alu -9 134 14 559 191 61 0 chr10 90252615 90252730 -50064035 - MLT1F1 LTR MaLR -445 122 1 452 190 86 0 chr10 90252797 90252913 -50063852 + L1 LINE L1 3877 4002 -2144 21 0 0 0 chr10 90252919 90252940 -50063825 + AT_rich Low_complexity Low_complexity 1 21 0 4480 139 54 0 chr10 90253093 90253946 -50062819 + L1 LINE L1 4122 5020 -1126 886 133 0 47 chr10 90253976 90254126 -50062639 - FLAM_C SINE Alu 0 143 1 297 197 0 45 chr10 90254174 90254194 -50062571 - Tigger2 DNA MER2_type -2645 73 54 2157 94 39 0 chr10 90254194 90254480 -50062285 + AluSx SINE Alu 1 297 -15 297 197 0 45 chr10 90254480 90254525 -50062240 - Tigger2 DNA MER2_type -2664 54 11 304 255 43 28 chr10 90254539 90254680 -50062085 + L1ME3A LINE L1 5611 5753 -2055 437 212 30 10 chr10 90254719 90254818 -50061947 + FAM SINE Alu 68 168 -17 355 321 46 46 chr10 90254818 90255036 -50061729 + L1ME3A LINE L1 5746 5963 -207 2197 128 0 0 chr10 90255144 90255441 -50061324 + AluSx SINE Alu 1 297 -15 2527 53 0 0 chr10 90255498 90255797 -50060968 - AluY SINE Alu -12 299 1 1119 264 148 15 chr10 90256643 90257417 -50059348 - L2 LINE L2 -2 3311 2439 1999 140 14 0 chr10 90257635 90257928 -50058837 - AluSx SINE Alu -9 303 7 366 266 96 23 chr10 90258101 90258278 -50058487 - MLT1K LTR MaLR 0 588 399 22 0 0 0 chr10 90258494 90258516 -50058249 + AT_rich Low_complexity Low_complexity 1 22 0 7458 57 18 9 chr10 90258743 90259707 -50057058 + HERVH LTR ERV1 6742 7713 0 3027 42 2 187 chr10 90259707 90260257 -50056508 + LTR7 LTR ERV1 1 448 -2 248 281 89 30 chr10 90260376 90260511 -50056254 - MER20B DNA MER1_type -613 170 28 * 534 235 287 31 chr10 90260493 90260880 -50055885 - LTR50 LTR ERVL -275 520 35 239 244 43 113 chr10 90261015 90261053 -50055712 + MIR SINE MIR 67 106 -156 1824 116 4 8 chr10 90261053 90261320 -50055445 - AluSg SINE Alu 0 310 45 239 244 43 113 chr10 90261320 90261396 -50055369 + MIR SINE MIR 106 173 -89 232 290 173 42 chr10 90261450 90261619 -50055146 + MIR SINE MIR 20 208 -54 1275 142 91 18 chr10 90261805 90262024 -50054741 + MER46A DNA MER2_type 2 236 0 21 0 0 0 chr10 90263771 90263792 -50052973 + AT_rich Low_complexity Low_complexity 1 21 0 2212 110 3 3 chr10 90263831 90264131 -50052634 + AluSx SINE Alu 1 300 -12 2374 90 0 0 chr10 90264131 90264430 -50052335 + AluSp SINE Alu 1 299 -14 356 283 11 0 chr10 90264572 90264664 -50052101 - MIR SINE MIR -108 154 62 33 0 0 0 chr10 90264664 90264697 -50052068 + AT_rich Low_complexity Low_complexity 1 33 0 525 292 206 74 chr10 90264763 90265077 -50051688 + L2 LINE L2 2139 2410 -903 1759 157 7 7 chr10 90265077 90265379 -50051386 - AluJo SINE Alu 0 302 1 525 292 206 74 chr10 90265379 90266113 -50050652 + L2 LINE L2 2410 3313 0 184 319 0 0 chr10 90266137 90266184 -50050581 - L3b LINE CR1 -7 1576 1530 1828 138 38 7 chr10 90266185 90266475 -50050290 + AluJo SINE Alu 1 299 -13 186 222 28 56 chr10 90266929 90267001 -50049764 - MIR SINE MIR -10 252 183 720 226 77 28 chr10 90267022 90267270 -50049495 + MIR SINE MIR 3 262 0 54 0 0 0 chr10 90267288 90267342 -50049423 + AT_rich Low_complexity Low_complexity 1 54 0 259 216 39 88 chr10 90267350 90267404 -50049361 - MIR SINE MIR -64 198 150 670 243 35 12 chr10 90267404 90267573 -50049192 - FAM SINE Alu -2 173 1 259 216 39 88 chr10 90267573 90267620 -50049145 - MIR SINE MIR -112 150 102 205 343 67 45 chr10 90267852 90267959 -50048806 + L2 LINE L2 3136 3248 -24 742 128 0 107 chr10 90267959 90268108 -50048657 + FLAM_C SINE Alu 1 133 0 205 343 67 45 chr10 90268108 90268134 -50048631 + L2 LINE L2 3248 3272 0 180 77 0 0 chr10 90269043 90269069 -50047696 + (TCCCC)n Simple_repeat Simple_repeat 3 28 0 2185 110 0 7 chr10 90269071 90269363 -50047402 - AluY SINE Alu -21 290 1 2379 84 0 37 chr10 90269363 90269686 -50047079 - AluSx SINE Alu -1 311 1 2169 107 4 0 chr10 90269748 90270054 -50046711 + AluSx SINE Alu 2 308 0 244 315 54 11 chr10 90270236 90270328 -50046437 - MIR3 SINE MIR -5 203 108 278 258 82 21 chr10 90270939 90271036 -50045729 + MIR SINE MIR 106 208 -54 1902 95 45 8 chr10 90271157 90271421 -50045344 + AluSg SINE Alu 1 274 -36 2546 66 0 0 chr10 90271857 90272162 -50044603 - AluY SINE Alu -6 305 1 209 234 21 0 chr10 90272854 90272901 -50043864 + MIR SINE MIR 106 153 -109 226 320 0 13 chr10 90273502 90273577 -50043188 - MLT1L LTR MaLR -536 79 6 23 0 0 0 chr10 90273621 90273644 -50043121 + AT_rich Low_complexity Low_complexity 1 23 0 525 264 164 73 chr10 90273689 90274128 -50042637 - MLT1L LTR MaLR -47 568 90 361 263 40 33 chr10 90275087 90275239 -50041526 + L2 LINE L2 3161 3313 0 1412 171 191 161 chr10 90275294 90275574 -50041191 + L1MC5 LINE L1 6656 6926 -1035 1314 129 47 168 chr10 90275574 90275914 -50040851 + AluJb SINE Alu 1 299 -3 1412 171 191 161 chr10 90275914 90276192 -50040573 + L1MC5 LINE L1 6926 7194 -767 408 163 13 22 chr10 90276192 90276281 -50040484 - MER3 DNA MER1_type -100 109 31 1412 171 191 161 chr10 90276281 90276840 -50039925 + L1MC5 LINE L1 7194 7898 -63 1757 93 0 0 chr10 90276866 90277091 -50039674 + AluSg/x SINE Alu 71 295 -17 243 288 0 0 chr10 90277120 90277200 -50039565 + L1ME4a LINE L1 5946 6025 -96 2146 84 10 24 chr10 90277340 90277638 -50039127 + AluSq SINE Alu 8 301 -12 459 248 16 16 chr10 90277669 90277794 -50038971 - L1MC5 LINE L1 -53 7908 7784 696 132 0 0 chr10 90277863 90277954 -50038811 + AluSx SINE Alu 2 92 -220 2435 33 0 0 chr10 90277954 90278226 -50038539 + AluY SINE Alu 31 302 -9 1639 107 4 0 chr10 90278226 90278450 -50038315 + AluSx SINE Alu 80 305 -5 2071 112 27 0 chr10 90278527 90278822 -50037943 - AluSx SINE Alu -9 303 1 1171 164 5 19 chr10 90278825 90279039 -50037726 - AluJo SINE Alu -100 212 2 2208 115 3 6 chr10 90279058 90279371 -50037394 - AluSx SINE Alu 0 312 1 1319 212 44 11 chr10 90279793 90280067 -50036698 + MER58B DNA MER1_type 10 292 -49 916 180 18 0 chr10 90280077 90280244 -50036521 + MER3 DNA MER1_type 40 209 0 774 289 140 10 chr10 90280784 90281192 -50035573 - L2 LINE L2 -367 2947 2487 2257 89 7 10 chr10 90281485 90281788 -50034977 - AluSq SINE Alu -11 302 1 195 333 41 34 chr10 90281815 90281962 -50034803 + L2 LINE L2 3158 3305 -8 238 204 133 71 chr10 90282143 90282256 -50034509 - MIR SINE MIR -49 213 94 319 286 53 64 chr10 90282431 90282602 -50034163 - MIR3 SINE MIR -13 195 27 2175 105 0 14 chr10 90282837 90283132 -50033633 + AluSx SINE Alu 1 291 -21 2010 156 0 0 chr10 90283200 90283501 -50033264 + AluJo SINE Alu 1 301 -11 1362 60 6 12 chr10 90284224 90284390 -50032375 + U1 snRNA snRNA 1 165 0 35 24 0 0 chr10 90284390 90284432 -50032333 + AT_rich Low_complexity Low_complexity 1 42 0 902 137 0 23 chr10 90285258 90285389 -50031376 - FLAM_C SINE Alu -5 128 1 225 65 0 0 chr10 90286749 90286780 -50029985 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1717 158 53 0 chr10 90287098 90287383 -50029382 - AluJb SINE Alu -12 300 1 901 129 0 0 chr10 90287405 90287537 -50029228 + AluJb SINE Alu 170 301 -11 21 0 0 0 chr10 90287644 90287665 -50029100 + AT_rich Low_complexity Low_complexity 1 21 0 281 148 98 0 chr10 90287844 90287905 -50028860 + L1MCa LINE L1 2179 2245 -4181 2534 60 3 0 chr10 90288163 90288464 -50028301 + AluY SINE Alu 1 302 -9 227 254 30 45 chr10 90288465 90288532 -50028233 - L3 LINE CR1 -15 1562 1497 450 296 230 18 chr10 90288557 90288953 -50027812 - L3 LINE CR1 -251 1326 847 283 106 0 21 chr10 90288953 90289000 -50027765 - Charlie2 DNA MER1_type -756 2106 2061 365 207 73 0 chr10 90289358 90289440 -50027325 + MIR SINE MIR 169 256 -6 559 251 40 40 chr10 90289464 90289687 -50027078 + Charlie2 DNA MER1_type 2 224 -2558 894 212 128 60 chr10 90289775 90289916 -50026849 + Charlie2 DNA MER1_type 1897 2027 -835 2075 124 3 0 chr10 90289916 90290206 -50026559 + AluSp SINE Alu 6 296 -17 894 212 128 60 chr10 90290206 90290399 -50026366 + Charlie2 DNA MER1_type 2027 2254 -608 945 173 209 16 chr10 90290401 90290527 -50026238 + AluSg1 SINE Alu 1 101 -208 2503 87 0 0 chr10 90290527 90290837 -50025928 + AluSx SINE Alu 1 310 -2 945 173 209 16 chr10 90290837 90290964 -50025801 + AluSg1 SINE Alu 101 303 -6 1474 198 134 53 chr10 90290969 90291530 -50025235 + Charlie2 DNA MER1_type 2256 2861 -1 394 326 82 43 chr10 90292184 90292272 -50024493 - MIR SINE MIR -13 249 166 1774 174 3 0 chr10 90292272 90292559 -50024206 - AluJo SINE Alu -22 290 3 394 326 82 43 chr10 90292559 90292703 -50024062 - MIR SINE MIR -96 166 8 635 147 0 69 chr10 90292726 90292842 -50023923 - FLAM_A SINE Alu -2 140 33 205 151 38 0 chr10 90292894 90292947 -50023818 + (TA)n Simple_repeat Simple_repeat 2 56 0 25 83 0 0 chr10 90293534 90293594 -50023171 + AT_rich Low_complexity Low_complexity 1 60 0 283 356 62 6 chr10 90295354 90295514 -50021251 - HAL1 LINE L1 -1963 544 376 2002 224 96 10 chr10 90295527 90296019 -50020746 + MLT1F LTR MaLR 1 534 -8 715 340 71 3 chr10 90296039 90296377 -50020388 - HAL1 LINE L1 -2146 361 1 273 221 65 0 chr10 90296380 90296457 -50020308 - L1MC/D LINE L1 -2322 5486 5405 1971 119 22 4 chr10 90296518 90296815 -50019950 - AluSx SINE Alu 0 302 1 718 289 42 5 chr10 90297121 90297311 -50019454 + HAL1 LINE L1 608 804 -1703 397 278 33 20 chr10 90297316 90297467 -50019298 + L1MEc LINE L1 148 300 -6096 3238 253 96 31 chr10 90297468 90298257 -50018508 + L1MEc LINE L1 446 1182 -5214 2264 65 18 0 chr10 90298257 90298561 -50018204 - AluY SINE Alu 0 309 1 2154 126 0 0 chr10 90298566 90298859 -50017906 - AluSx SINE Alu -19 293 1 3238 253 96 31 chr10 90298859 90299329 -50017436 + L1MEc LINE L1 1185 1795 -4601 1217 263 90 61 chr10 90300537 90301093 -50015672 - L1MCa LINE L1 -4528 2594 2055 2601 36 0 16 chr10 90301093 90301400 -50015365 + AluY SINE Alu 1 302 -9 1217 263 90 61 chr10 90301400 90301896 -50014869 - L1MCa LINE L1 -5067 2055 1308 3994 146 44 29 chr10 90301915 90302641 -50014124 + L1MA4 LINE L1 5433 6169 -131 1301 152 0 5 chr10 90302643 90302841 -50013924 + AluJb SINE Alu 86 282 -30 818 116 7 65 chr10 90302844 90302999 -50013766 + L1MA4 LINE L1 6155 6300 0 841 272 41 32 chr10 90303000 90303338 -50013427 - L1MCa LINE L1 -5138 1285 945 788 280 31 49 chr10 90303666 90303948 -50012817 + HAL1 LINE L1 2062 2335 -172 1808 168 23 3 chr10 90303948 90304252 -50012513 + AluSx SINE Alu 1 310 -2 788 280 31 49 chr10 90304252 90304422 -50012343 + HAL1 LINE L1 2335 2506 -1 306 249 133 48 chr10 90304649 90304688 -50012077 + L1MC4a LINE L1 5720 5754 -2054 2223 118 0 16 chr10 90304688 90305003 -50011762 + AluSx SINE Alu 1 310 -2 306 249 133 48 chr10 90305003 90305128 -50011637 + L1MC4a LINE L1 5754 5898 -1910 22 35 0 0 chr10 90305311 90305340 -50011425 + AT_rich Low_complexity Low_complexity 1 29 0 489 160 0 13 chr10 90305462 90305537 -50011228 + AluJb SINE Alu 2 75 -237 1689 136 0 0 chr10 90305579 90305814 -50010951 + AluJb SINE Alu 70 304 -8 258 254 53 42 chr10 90305823 90306100 -50010665 + L1MC/D LINE L1 5054 5343 -817 1892 146 3 14 chr10 90306105 90306393 -50010372 + AluJb SINE Alu 4 288 -24 323 296 106 0 chr10 90306405 90306547 -50010218 + L1MC/D LINE L1 5328 5484 -2324 276 30 0 0 chr10 90307741 90307774 -50008991 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1532 157 15 25 chr10 90307787 90308061 -50008704 - AluSx SINE Alu -37 275 5 4059 201 65 23 chr10 90308110 90309762 -50007003 + L1ME1 LINE L1 4177 5903 -263 1680 63 5 24 chr10 90309763 90309968 -50006797 - AluSx SINE Alu -111 201 1 452 203 75 30 chr10 90309975 90310108 -50006657 + L1ME1 LINE L1 6022 6160 -6 1834 126 8 0 chr10 90310127 90310381 -50006384 + AluSx SINE Alu 44 299 -13 378 148 37 37 chr10 90310910 90310991 -50005774 - MLT1G LTR MaLR -15 575 495 2268 101 0 13 chr10 90311344 90311642 -50005123 + AluSx SINE Alu 1 294 -18 1556 234 52 11 chr10 90312514 90312958 -50003807 - MLT1C LTR MaLR 0 467 6 2177 119 23 0 chr10 90313250 90313553 -50003212 - AluSx SINE Alu -1 311 2 422 322 40 52 chr10 90314300 90314333 -50002432 - L1MC4a LINE L1 -1902 5906 5874 1821 160 45 0 chr10 90314333 90314620 -50002145 - AluJo SINE Alu 0 312 13 422 322 40 52 chr10 90314620 90314987 -50001778 - L1MC4a LINE L1 -1934 5874 5511 2123 143 7 0 chr10 90315484 90315791 -50000974 - AluSx SINE Alu -3 309 1 621 229 75 53 chr10 90315836 90316063 -50000702 + MER46C DNA MER2_type 81 312 -26 3703 131 40 5 chr10 90316414 90317073 -49999692 - L1MA2 LINE L1 0 6304 5623 1926 217 88 34 chr10 90317104 90317629 -49999136 - MER68 LTR ERV1 -8 554 2 3797 76 12 13 chr10 90319368 90320367 -49996398 - L1P2 LINE L1 -432 5723 4731 540 120 0 0 chr10 90320506 90320581 -49996184 - AluS SINE Alu -233 76 2 2105 112 0 60 chr10 90320582 90320913 -49995852 - AluSx SINE Alu -1 311 1 22 35 0 0 chr10 90320959 90320988 -49995777 + AT_rich Low_complexity Low_complexity 1 29 0 312 289 72 36 chr10 90320988 90321154 -49995611 - HAL1b LINE L1 -746 602 431 31 0 0 0 chr10 90321191 90321222 -49995543 + AT_rich Low_complexity Low_complexity 1 31 0 320 242 40 57 chr10 90321222 90321346 -49995419 - AluSq/x SINE Alu -176 127 6 284 262 12 98 chr10 90321363 90321527 -49995238 - FRAM SINE Alu -8 158 9 332 274 166 32 chr10 90321760 90321917 -49994848 - MIR SINE MIR -66 196 19 2303 119 0 0 chr10 90322084 90322379 -49994386 + AluSx SINE Alu 1 295 -17 2446 108 0 3 chr10 90325440 90325754 -49991011 - AluSq SINE Alu 0 313 1 340 271 111 37 chr10 90325760 90325883 -49990882 - L1ME4a LINE L1 -1 6120 6008 2282 89 10 13 chr10 90325883 90326185 -49990580 - AluSx SINE Alu -11 301 1 340 271 111 37 chr10 90326185 90326538 -49990227 - L1ME4a LINE L1 -113 6008 5524 2236 114 7 0 chr10 90327510 90327808 -49988957 - AluSx SINE Alu -12 300 1 852 180 62 0 chr10 90327966 90328127 -49988638 - FAM SINE Alu -4 171 1 2091 114 40 7 chr10 90328201 90328498 -49988267 + AluSx SINE Alu 1 307 -5 303 170 0 0 chr10 90328498 90328545 -49988220 - L1MC4 LINE L1 -1344 6698 6652 275 329 171 19 chr10 90328770 90329190 -49987575 - HAL1 LINE L1 -874 1633 1150 775 154 66 186 chr10 90329223 90329600 -49987165 - L1MC4 LINE L1 -1 8041 7710 999 193 0 0 chr10 90329618 90329784 -49986981 - FRAM SINE Alu -16 160 1 599 151 28 0 chr10 90330381 90330487 -49986278 - L1PA16 LINE L1 -49 6117 6009 2300 95 0 14 chr10 90330680 90330974 -49985791 - AluSq SINE Alu -13 300 11 2302 107 0 0 chr10 90331737 90332028 -49984737 + AluSx SINE Alu 1 291 -21 979 65 0 0 chr10 90332299 90332422 -49984343 - AluSg/x SINE Alu -9 303 181 1883 127 58 22 chr10 90333047 90333408 -49983357 - THE1C LTR MaLR 0 375 2 432 156 26 0 chr10 90334632 90334709 -49982056 - AluJ/FRAM SINE Alu -16 296 218 776 136 15 30 chr10 90334710 90334842 -49981923 - AluJo/FLAM SINE Alu -172 130 1 286 203 31 0 chr10 90334934 90334998 -49981767 - MIR SINE MIR -110 98 33 1910 148 21 0 chr10 90335200 90335491 -49981274 - AluJo SINE Alu -15 297 1 364 296 56 42 chr10 90335498 90335640 -49981125 - MIR3 SINE MIR -64 144 1 2473 66 10 0 chr10 90336138 90336439 -49980326 + AluSp SINE Alu 1 304 -9 2575 71 0 0 chr10 90336440 90336749 -49980016 + AluSg SINE Alu 2 310 0 507 17 0 0 chr10 90337064 90337124 -49979641 + (TG)n Simple_repeat Simple_repeat 2 61 0 1076 139 0 0 chr10 90337124 90337275 -49979490 - AluSg/x SINE Alu -28 282 132 2426 55 24 0 chr10 90337275 90337567 -49979198 - AluSq SINE Alu -14 299 1 182 222 167 0 chr10 90338281 90338335 -49978430 + MIR SINE MIR 65 127 -135 1493 146 41 17 chr10 90338493 90338774 -49977991 - MER44D DNA MER2_type -1898 593 320 1956 164 7 7 chr10 90338774 90339084 -49977681 + AluJb SINE Alu 1 310 -2 1493 146 41 17 chr10 90339084 90339096 -49977669 - MER44D DNA MER2_type -2171 320 23 327 294 102 17 chr10 90341840 90342017 -49974748 - MER117 DNA MER1_type -3 194 3 346 225 108 18 chr10 90343384 90343495 -49973270 + MIR SINE MIR 33 153 -109 312 299 203 8 chr10 90344283 90344524 -49972241 - L2 LINE L2 -536 2778 2491 2278 91 0 17 chr10 90344631 90344928 -49971837 - AluSg SINE Alu -18 292 1 2722 239 55 52 chr10 90344957 90345209 -49971556 + HAL1 LINE L1 618 868 -1639 2064 137 31 0 chr10 90345209 90345501 -49971264 + AluJo SINE Alu 1 301 -11 2722 239 55 52 chr10 90345501 90345929 -49970836 + HAL1 LINE L1 868 1305 -1202 1960 153 3 10 chr10 90345929 90346229 -49970536 + AluJo SINE Alu 1 298 -14 2722 239 55 52 chr10 90346229 90346608 -49970157 + HAL1 LINE L1 1305 1681 -826 626 209 16 8 chr10 90346673 90346802 -49969963 + FLAM_C SINE Alu 2 131 -2 2211 113 0 0 chr10 90346851 90347173 -49969592 + AluSx SINE Alu 1 322 0 845 172 15 0 chr10 90347179 90347313 -49969452 + AluJo SINE Alu 1 136 -176 2025 131 23 7 chr10 90347322 90347627 -49969138 + AluSg SINE Alu 1 310 0 671 271 133 7 chr10 90347733 90348035 -49968730 + HAL1 LINE L1 1701 2040 -467 1120 93 0 0 chr10 90348225 90348364 -49968401 + AluSp/q SINE Alu 163 301 -12 437 248 117 0 chr10 90348375 90348520 -49968245 + HAL1 LINE L1 2306 2467 -40 1091 208 0 39 chr10 90348529 90348578 -49968187 - MER58A DNA MER1_type -2198 222 173 824 180 78 12 chr10 90348578 90348745 -49968020 - MER45A DNA AcHobo 0 178 1 1091 208 0 39 chr10 90348745 90348926 -49967839 - MER58A DNA MER1_type -2247 173 1 1841 159 31 0 chr10 90349025 90349315 -49967450 + AluJb SINE Alu 3 301 -11 4548 72 21 6 chr10 90349654 90350761 -49966004 - MER11A LTR ERVK 0 1266 1 697 170 19 82 chr10 90350835 90350994 -49965771 + MER20 DNA MER1_type 70 218 -1 365 254 43 0 chr10 90353822 90353939 -49962826 + MIR SINE MIR 44 165 -43 229 200 88 50 chr10 90354489 90354569 -49962196 - MIR SINE MIR -74 188 106 29 28 0 0 chr10 90356079 90356115 -49960650 + GC_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr10 90356387 90356407 -49960358 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 302 301 11 0 chr10 90358541 90358634 -49958131 + (TG)n Simple_repeat Simple_repeat 1 94 0 332 251 222 18 chr10 90358721 90358888 -49957877 - MIR SINE MIR -37 225 25 313 275 46 0 chr10 90359156 90359265 -49957500 + MIR SINE MIR 70 183 -79 189 0 0 0 chr10 90359332 90359353 -49957412 + (CAT)n Simple_repeat Simple_repeat 1 21 0 280 255 94 47 chr10 90361792 90361898 -49954867 - MIR SINE MIR 0 262 152 768 160 87 48 chr10 90362981 90363187 -49953578 - Tigger7 DNA MER2_type -7 2480 2267 256 16 47 172 chr10 90363180 90363210 -49953555 - Tigger7 DNA MER2_type -2369 118 98 * 2303 106 7 0 chr10 90363210 90363511 -49953254 - AluSx SINE Alu -9 303 1 256 16 47 172 chr10 90363511 90363544 -49953221 - Tigger7 DNA MER2_type -2388 99 63 639 170 102 0 chr10 90363557 90363704 -49953061 - LTR49 LTR ERV1 0 595 434 1218 236 114 20 chr10 90363712 90364114 -49952651 - LTR48B LTR ERV1 -204 440 1 1258 125 22 0 chr10 90364140 90364324 -49952441 + AluSp SINE Alu 123 310 -3 450 0 0 0 chr10 90365041 90365091 -49951674 + (TG)n Simple_repeat Simple_repeat 2 51 0 421 257 88 20 chr10 90365853 90366001 -49950764 + MIR SINE MIR 91 248 -14 21 57 0 0 chr10 90369191 90369226 -49947539 + GC_rich Low_complexity Low_complexity 1 35 0 764 113 7 71 chr10 90370278 90370419 -49946346 + FLAM_C SINE Alu 1 132 -1 261 0 0 0 chr10 90370739 90370768 -49945997 + (CA)n Simple_repeat Simple_repeat 2 30 0 2486 139 21 104 chr10 90371200 90371530 -49945235 - LTR26B LTR ERV1 -5 526 263 2131 115 13 19 chr10 90371530 90371844 -49944921 + AluSx SINE Alu 1 312 0 2486 139 21 104 chr10 90371844 90372087 -49944678 - LTR26B LTR ERV1 -268 263 1 339 298 107 71 chr10 90372529 90372762 -49944003 - HAL1b LINE L1 -490 858 635 225 0 0 0 chr10 90372762 90372787 -49943978 + (TC)n Simple_repeat Simple_repeat 2 26 0 2163 130 0 0 chr10 90372787 90373079 -49943686 - AluSq SINE Alu -21 292 1 339 298 107 71 chr10 90373079 90373096 -49943669 - HAL1b LINE L1 -712 636 598 1991 112 0 47 chr10 90373193 90373540 -49943225 - AluSx SINE Alu 0 333 1 22 35 0 0 chr10 90373586 90373615 -49943150 + AT_rich Low_complexity Low_complexity 1 29 0 383 265 72 36 chr10 90373615 90373781 -49942984 - HAL1b LINE L1 -746 602 431 756 154 15 8 chr10 90373835 90373965 -49942800 - AluJo SINE Alu -176 136 6 1845 142 10 43 chr10 90373980 90374282 -49942483 - AluJo SINE Alu -18 294 3 1954 148 7 3 chr10 90374446 90374737 -49942028 + AluJo SINE Alu 5 296 -16 537 165 0 0 chr10 90374744 90374841 -49941924 + (TG)n Simple_repeat Simple_repeat 2 98 0 935 166 27 70 chr10 90374842 90374954 -49941811 - L1M4 LINE L1 -487 5691 5576 2142 131 3 13 chr10 90374954 90375267 -49941498 - AluSg SINE Alu 0 310 1 935 166 27 70 chr10 90375267 90375367 -49941398 - L1M4 LINE L1 -602 5576 5479 1187 160 0 0 chr10 90375367 90375542 -49941223 - FAM SINE Alu 0 175 1 935 166 27 70 chr10 90375542 90375563 -49941202 - L1M4 LINE L1 -699 5479 5459 306 236 67 85 chr10 90375563 90375728 -49941037 - L1MCa LINE L1 -5122 1304 1143 1859 218 64 64 chr10 90375981 90376058 -49940707 + L1MC4a LINE L1 5865 5941 -1867 2348 113 0 0 chr10 90376058 90376367 -49940398 + AluSg SINE Alu 1 309 -1 1859 218 64 64 chr10 90376367 90376403 -49940362 + L1MC4a LINE L1 5941 5976 -1832 1941 160 21 0 chr10 90376403 90376691 -49940074 + AluSx SINE Alu 1 294 -18 1859 218 64 64 chr10 90376691 90377310 -49939455 + L1MC4a LINE L1 5975 6598 -1210 816 157 0 8 chr10 90377336 90377457 -49939308 + AluJb SINE Alu 1 120 -192 1643 119 0 0 chr10 90377669 90377888 -49938877 - AluSg/x SINE Alu -9 301 83 1008 215 6 0 chr10 90378737 90378914 -49937851 - MER45A DNA AcHobo 0 178 1 1853 114 46 10 chr10 90378975 90379282 -49937483 + THE1C LTR MaLR 1 318 -57 1167 70 76 5 chr10 90379281 90379466 -49937299 - PABL_B LTR ERV1 -221 446 249 * 2375 110 0 0 chr10 90380381 90380691 -49936074 - AluSg SINE Alu 0 310 1 376 302 43 36 chr10 90381245 90381384 -49935381 - MIR3 SINE MIR -49 159 20 6004 41 16 1 chr10 90382259 90383023 -49933742 - L1PA5 LINE L1 -2 6152 5378 602 279 104 70 chr10 90383533 90383795 -49932970 - HAL1 LINE L1 -1127 1380 1104 2762 35 0 3 chr10 90383795 90384107 -49932658 - AluY SINE Alu 0 311 1 602 279 104 70 chr10 90384107 90384160 -49932605 - HAL1 LINE L1 -1403 1104 1054 271 235 76 17 chr10 90384175 90384294 -49932471 - HAL1 LINE L1 -1554 953 828 3364 191 24 40 chr10 90384301 90385101 -49931664 - L1MB3 LINE L1 -1 6182 5396 305 233 57 85 chr10 90385085 90385261 -49931504 - HAL1 LINE L1 -1648 859 689 * 8280 169 35 9 chr10 90385258 90388107 -49928658 - L1MA3 LINE L1 0 6305 3379 397 286 49 87 chr10 90388096 90388463 -49928302 - HAL1 LINE L1 -1808 699 347 * 1092 278 32 0 chr10 90388655 90388968 -49927797 + L1M4 LINE L1 3437 3759 -2387 2308 104 0 0 chr10 90388969 90389257 -49927508 + AluSx SINE Alu 1 288 -24 238 229 48 0 chr10 90389257 90389340 -49927425 + L1MC4 LINE L1 6617 6703 -1339 201 222 0 22 chr10 90389343 90389388 -49927377 + (TA)n Simple_repeat Simple_repeat 1 44 0 49 0 0 0 chr10 90390106 90390155 -49926610 + AT_rich Low_complexity Low_complexity 1 49 0 1416 116 10 0 chr10 90390313 90390511 -49926254 + AluY SINE Alu 102 301 -10 691 220 0 8 chr10 90391044 90391176 -49925589 + FLAM_A SINE Alu 1 131 -2 1673 178 3 33 chr10 90391179 90391483 -49925282 + AluJo SINE Alu 1 295 -17 317 336 218 24 chr10 90391635 90392016 -49924749 - L2 LINE L2 -5 3308 2854 481 172 54 0 chr10 90392024 90392117 -49924648 + LTR47B LTR ERVL 5 102 -341 2368 102 0 0 chr10 90392124 90392429 -49924336 - AluSx SINE Alu -7 305 1 1279 158 28 28 chr10 90392430 90392677 -49924088 + LTR47A LTR ERVL 206 452 0 3081 151 20 56 chr10 90392677 90393287 -49923478 + L1MB2 LINE L1 5582 6169 -2 2232 114 10 3 chr10 90393292 90393599 -49923166 - AluSx SINE Alu -3 309 1 2124 102 3 14 chr10 90393614 90393924 -49922841 - AluSp SINE Alu 0 307 1 2264 116 7 0 chr10 90393925 90394228 -49922537 - AluSp SINE Alu -8 305 1 1537 232 45 30 chr10 90394242 90394733 -49922032 + L1MC4a LINE L1 7160 7657 -151 53 73 0 0 chr10 90394738 90394847 -49921918 + AT_rich Low_complexity Low_complexity 1 109 0 348 64 0 0 chr10 90395571 90395618 -49921147 + (TCC)n Simple_repeat Simple_repeat 2 48 0 2159 106 0 3 chr10 90395685 90396019 -49920746 + AluSq SINE Alu 1 333 0 959 269 179 5 chr10 90396073 90396504 -49920261 + LTR33 LTR ERVL 15 520 -1 286 110 0 20 chr10 90398071 90398127 -49918638 + MER69 DNA AcHobo 2444 2498 -28 278 56 0 0 chr10 90398649 90398685 -49918080 - MIR SINE MIR -114 148 113 2151 143 0 3 chr10 90400088 90400396 -49916369 - AluSx SINE Alu -5 307 1 185 284 34 45 chr10 90400568 90400609 -49916156 - MIR SINE MIR -74 188 148 2556 69 27 0 chr10 90400609 90400944 -49915821 + LTR14A LTR ERVK 1 344 0 185 284 34 45 chr10 90400944 90400990 -49915775 - MIR SINE MIR -114 148 102 2480 78 0 3 chr10 90401913 90402219 -49914546 + AluY SINE Alu 1 305 -6 2310 67 42 0 chr10 90402221 90402504 -49914261 + AluY SINE Alu 2 296 -15 470 286 44 68 chr10 90402583 90402674 -49914091 + L1M4 LINE L1 4963 5055 -1091 1388 142 151 57 chr10 90402674 90402707 -49914058 - MLT1A1 LTR MaLR -2 363 334 2150 135 0 0 chr10 90402707 90403004 -49913761 + AluSx SINE Alu 1 297 -15 1388 142 151 57 chr10 90403004 90403302 -49913463 - MLT1A1 LTR MaLR -31 334 1 470 286 44 68 chr10 90403302 90403504 -49913261 + L1M4 LINE L1 5055 5249 -897 358 298 16 0 chr10 90403512 90403633 -49913132 + L1P LINE L1 5305 5427 -729 1027 123 32 73 chr10 90404049 90404215 -49912550 - L1MA4A LINE L1 -4 6299 6143 2116 112 0 77 chr10 90404215 90404553 -49912212 - AluSx SINE Alu 0 312 1 1027 123 32 73 chr10 90404553 90404605 -49912160 - L1MA4A LINE L1 -160 6143 6090 2313 102 0 0 chr10 90405099 90405393 -49911372 - AluY SINE Alu -17 294 1 309 176 13 6 chr10 90406771 90406857 -49909908 + Alu SINE Alu 1 42 -260 1366 128 5 15 chr10 90406957 90407161 -49909604 + AluSp SINE Alu 95 296 -17 1005 241 69 38 chr10 90407173 90407293 -49909472 + AluJo SINE Alu 3 118 -184 2015 150 3 0 chr10 90407293 90407593 -49909172 - AluSx SINE Alu -6 306 6 1005 241 69 38 chr10 90407593 90407762 -49909003 + AluJo SINE Alu 118 301 -1 1808 156 50 20 chr10 90407879 90408181 -49908584 + AluSx SINE Alu 1 311 -1 217 174 333 0 chr10 90408394 90408463 -49908302 + MER5C DNA MER1_type 33 124 -200 2175 148 0 0 chr10 90408593 90408903 -49907862 + AluSx SINE Alu 3 312 0 1228 111 8 95 chr10 90408908 90408958 -49907807 - PABL_A-int LTR ERV1 -4066 949 896 2155 108 44 0 chr10 90408958 90409253 -49907512 + AluSq SINE Alu 1 308 -5 1228 111 8 95 chr10 90409253 90409454 -49907311 - PABL_A-int LTR ERV1 -4119 896 750 585 156 0 0 chr10 90409448 90409538 -49907227 - pTR5 LTR ERV1 -2046 392 303 * 303 233 11 0 chr10 90409540 90409630 -49907135 - LTR30 LTR ERV1 -79 643 553 5331 159 106 36 chr10 90409635 90410839 -49905926 - pTR5 LTR ERV1 -409 2029 743 3403 130 136 77 chr10 90410837 90411242 -49905523 - MER4A-int LTR ERV1 -5013 1585 1205 * 360 119 0 0 chr10 90411242 90411301 -49905464 + (CA)n Simple_repeat Simple_repeat 2 60 0 3403 130 136 77 chr10 90411301 90412345 -49904420 - MER4A-int LTR ERV1 -5393 1205 1 1995 122 3 19 chr10 90412348 90412699 -49904066 - MER4A LTR ERV1 0 664 261 696 102 0 10 chr10 90412699 90412797 -49903968 - MER4A LTR ERV1 -566 98 2 235 188 0 0 chr10 90412816 90412864 -49903901 - LTR66 LTR ERVL -169 441 394 438 170 0 70 chr10 90412884 90412984 -49903781 + L1M4 LINE L1 167 259 -6283 * 12826 197 39 34 chr10 90412983 90413259 -49903506 - L1PA13 LINE L1 -2033 4764 4491 1506 77 0 0 chr10 90413259 90413441 -49903324 - AluY SINE Alu -15 296 115 1874 204 92 24 chr10 90413441 90413898 -49902867 + LTR2B LTR ERV1 3 490 0 905 133 0 0 chr10 90413898 90414018 -49902747 - AluY SINE Alu -191 120 1 12826 197 39 34 chr10 90414018 90414499 -49902266 - L1PA13 LINE L1 -2306 4491 4014 2265 119 0 19 chr10 90414499 90414817 -49901948 - AluSx SINE Alu 0 312 1 12826 197 39 34 chr10 90414817 90418705 -49898060 - L1PA13 LINE L1 -2783 4014 2 313 199 29 2 chr10 90418720 90418796 -49897969 - L1M4 LINE L1 -1818 4564 4488 1696 175 4 4 chr10 90418810 90419079 -49897686 - AluJb SINE Alu -43 269 1 1083 240 44 3 chr10 90419110 90419498 -49897267 - L1M4 LINE L1 -2659 3723 3320 858 108 108 78 chr10 90419509 90419676 -49897089 - MER30B DNA MER1_type 0 230 59 1925 183 78 32 chr10 90419677 90420115 -49896650 - LTR2B LTR ERV1 -1 489 32 388 123 18 0 chr10 90420132 90420189 -49896576 - MER30B DNA MER1_type -129 61 4 2150 130 7 3 chr10 90420228 90420535 -49896230 - AluSc SINE Alu -1 308 1 23 0 0 0 chr10 90420535 90420558 -49896207 + AT_rich Low_complexity Low_complexity 1 23 0 743 99 30 0 chr10 90420558 90420659 -49896106 - U6 snRNA snRNA -2 105 2 2008 84 58 22 chr10 90420702 90420976 -49895789 - AluY SINE Alu -24 287 4 2557 228 62 46 chr10 90420976 90421220 -49895545 - L1M4 LINE L1 -3116 3266 3027 1995 141 0 7 chr10 90421220 90421517 -49895248 - AluSx SINE Alu -17 295 1 2019 121 3 29 chr10 90421519 90421833 -49894932 - AluJb SINE Alu -6 306 1 2557 228 62 46 chr10 90421833 90422067 -49894698 - L1M4 LINE L1 -3355 3027 2798 1641 174 0 0 chr10 90422067 90422325 -49894440 + AluJb SINE Alu 1 258 -54 2557 228 62 46 chr10 90422325 90422725 -49894040 - L1M4 LINE L1 -3584 2798 2370 510 111 56 0 chr10 90422761 90422851 -49893914 + AluJb SINE Alu 206 300 -12 1808 155 0 7 chr10 90422865 90423143 -49893622 + AluJb SINE Alu 14 289 -23 1763 161 30 16 chr10 90423152 90423457 -49893308 + AluSx SINE Alu 1 309 -3 609 235 94 19 chr10 90423813 90423993 -49892772 - L1M4 LINE L1 -4190 2194 2029 2507 71 0 0 chr10 90423993 90424287 -49892478 - AluY SINE Alu -17 294 1 609 235 94 19 chr10 90424287 90424455 -49892310 - L1M4 LINE L1 -4355 2029 1726 2167 127 0 0 chr10 90424455 90424747 -49892018 - AluSx SINE Alu -20 292 1 1326 209 57 17 chr10 90424760 90425057 -49891708 - AluJo SINE Alu -3 309 1 585 202 61 0 chr10 90425061 90425175 -49891590 - AluJo SINE Alu -178 134 14 1944 114 46 11 chr10 90425200 90425480 -49891285 - AluSg SINE Alu -20 290 1 1410 204 64 83 chr10 90425536 90425957 -49890808 - L1M4 LINE L1 -4652 1732 1320 1567 69 0 25 chr10 90425957 90426190 -49890575 - AluY SINE Alu 0 311 89 529 176 0 0 chr10 90426237 90426322 -49890443 + AluJ/FLAM SINE Alu 5 89 -223 1060 105 19 91 chr10 90426425 90426634 -49890131 + AluJb SINE Alu 119 312 0 697 189 110 100 chr10 90426650 90426850 -49889915 + L1M4 LINE L1 5060 5265 -881 706 219 0 0 chr10 90426850 90426969 -49889796 - FLAM_A SINE Alu -14 119 1 697 189 110 100 chr10 90426969 90427049 -49889716 + L1M4 LINE L1 5265 5343 -803 239 200 32 128 chr10 90427057 90427182 -49889583 + HAL1 LINE L1 2359 2471 -36 814 208 153 0 chr10 90427189 90427372 -49889393 + MER20 DNA MER1_type 5 215 -4 2218 128 0 0 chr10 90427386 90427684 -49889081 + AluSx SINE Alu 1 298 -14 21 57 0 0 chr10 90427730 90427765 -49889000 + AT_rich Low_complexity Low_complexity 1 35 0 2354 71 7 3 chr10 90427899 90428193 -49888572 - AluY SINE Alu -16 295 1 216 163 0 0 chr10 90428244 90428287 -49888478 + A-rich Low_complexity Low_complexity 1 43 0 1551 183 0 50 chr10 90428501 90428818 -49887947 + AluSg SINE Alu 1 301 -9 685 181 8 8 chr10 90428964 90429091 -49887674 - AluY SINE Alu -183 128 2 216 163 0 0 chr10 90429143 90429186 -49887579 + A-rich Low_complexity Low_complexity 1 43 0 2208 119 0 10 chr10 90429400 90429711 -49887054 + AluSg SINE Alu 1 308 -2 1818 163 3 7 chr10 90429889 90430184 -49886581 + AluJb SINE Alu 1 294 -18 21 36 0 0 chr10 90430694 90430722 -49886043 + AT_rich Low_complexity Low_complexity 1 28 0 570 82 0 0 chr10 90430730 90430803 -49885962 + U3 snRNA snRNA 1 73 -144 2212 117 0 28 chr10 90432552 90432693 -49884072 + AluSx SINE Alu 1 144 -168 2161 109 3 16 chr10 90432693 90433005 -49883760 + AluSx SINE Alu 5 312 0 2212 117 0 28 chr10 90433005 90433180 -49883585 + AluSx SINE Alu 144 308 -4 329 226 91 9 chr10 90433180 90433314 -49883451 + L1MB7 LINE L1 6039 6178 0 350 244 104 0 chr10 90434411 90434526 -49882239 - MIR SINE MIR -66 142 16 198 313 172 10 chr10 90434656 90434755 -49882010 - L2 LINE L2 -17 3255 3141 2469 264 173 8 chr10 90434757 90435907 -49880858 - L2 LINE L2 -1090 2224 885 2539 63 0 16 chr10 90436318 90436633 -49880132 + AluSg SINE Alu 1 310 0 2379 85 0 7 chr10 90437413 90437719 -49879046 - AluSq SINE Alu -9 304 1 323 265 157 34 chr10 90437766 90437913 -49878852 - L1ME LINE L1 -452 5669 5505 2069 102 7 4 chr10 90438136 90438411 -49878354 - AluSc SINE Alu -33 276 1 401 138 0 0 chr10 90438428 90438486 -49878279 - FLAM SINE Alu -19 124 67 21 0 0 0 chr10 90438599 90438620 -49878145 + AT_rich Low_complexity Low_complexity 1 21 0 2276 86 0 0 chr10 90439012 90439292 -49877473 - AluY SINE Alu -31 280 1 2322 94 0 3 chr10 90439735 90440033 -49876732 + AluSc SINE Alu 1 297 -12 591 186 0 9 chr10 90441610 90441723 -49875042 + L1MB8 LINE L1 6066 6177 -1 2014 93 48 4 chr10 90442367 90442636 -49874129 + AluSx SINE Alu 4 284 -28 2110 127 3 13 chr10 90442744 90442907 -49873858 - AluSx SINE Alu -15 297 137 2332 87 0 3 chr10 90442907 90443206 -49873559 - AluSc SINE Alu -11 298 1 2110 127 3 13 chr10 90443206 90443342 -49873423 - AluSx SINE Alu -175 137 1 2271 92 3 0 chr10 90444180 90444496 -49872269 - AluSp SINE Alu 0 318 2 2291 50 3 107 chr10 90444999 90445337 -49871428 - AluY SINE Alu -8 303 1 1540 71 95 9 chr10 90446213 90446424 -49870341 + AluSg/x SINE Alu 81 309 -3 567 125 0 0 chr10 90446451 90446531 -49870234 - AluS SINE Alu -233 80 1 526 273 119 31 chr10 90446840 90447067 -49869698 - MIR SINE MIR -2 260 14 187 313 100 62 chr10 90447455 90447695 -49869070 + L2 LINE L2 2721 2969 -345 1914 141 46 0 chr10 90448367 90448650 -49868115 - AluJb SINE Alu -16 296 1 2266 97 10 10 chr10 90450359 90450658 -49866107 + AluSg SINE Alu 1 299 -11 234 91 0 0 chr10 90450975 90451008 -49865757 + (CAA)n Simple_repeat Simple_repeat 1 33 0 877 117 7 41 chr10 90451296 90451441 -49865324 + FLAM_C SINE Alu 1 140 -3 2319 90 0 0 chr10 90451443 90451742 -49865023 + AluSc SINE Alu 1 299 -10 2435 82 3 0 chr10 90451973 90452276 -49864489 + AluY SINE Alu 1 304 -7 636 219 44 0 chr10 90452610 90452747 -49864018 + L1M4 LINE L1 3567 3709 -2437 * 755 176 52 42 chr10 90452725 90452918 -49863847 + L1M4 LINE L1 4368 4562 -1584 1362 215 37 11 chr10 90452918 90453188 -49863577 + AluJb SINE Alu 1 277 -35 413 157 0 93 chr10 90453204 90453312 -49863453 + L1M4 LINE L1 4549 4646 -1500 1550 186 29 48 chr10 90454068 90454380 -49862385 - AluJo SINE Alu -6 306 1 2271 99 10 19 chr10 90454534 90454846 -49861919 - AluY SINE Alu -1 310 2 1959 137 46 0 chr10 90455145 90455429 -49861336 + AluSx SINE Alu 1 297 -15 222 239 148 11 chr10 90455634 90455722 -49861043 - MIR SINE MIR -56 206 107 25 31 0 0 chr10 90455800 90455832 -49860933 + AT_rich Low_complexity Low_complexity 1 32 0 1097 135 39 0 chr10 90456038 90456194 -49860571 - AluSg/x SINE Alu -18 294 133 212 270 0 34 chr10 90456293 90456382 -49860383 + A-rich Low_complexity Low_complexity 4 89 0 2083 128 26 0 chr10 90456566 90456870 -49859895 + AluSx SINE Alu 1 312 0 1435 160 9 0 chr10 90457956 90458169 -49858596 - AluJb SINE Alu -30 282 68 606 219 8 0 chr10 90458271 90458394 -49858371 - FLAM_C SINE Alu -8 125 2 734 269 90 19 chr10 90459366 90459678 -49857087 + L2 LINE L2 2976 3309 -4 618 161 32 16 chr10 90459818 90459942 -49856823 + L1MA7 LINE L1 5989 6114 -177 763 203 15 0 chr10 90459943 90460076 -49856689 + AluJo SINE Alu 2 136 -176 641 183 37 63 chr10 90460077 90460268 -49856497 + L1MA7 LINE L1 6106 6291 0 912 193 5 5 chr10 90460357 90460549 -49856216 + AluJo SINE Alu 120 311 -1 5850 72 18 49 chr10 90461097 90462148 -49854617 + SVA Other Other 16 868 -518 6639 63 19 49 chr10 90462159 90463141 -49853624 + SVA Other Other 433 1385 -1 1723 134 108 7 chr10 90464136 90464413 -49852352 + AluSx SINE Alu 1 305 -7 744 165 28 0 chr10 90464885 90464994 -49851771 + FLAM_C SINE Alu 6 117 -26 249 33 0 0 chr10 90464994 90465024 -49851741 + (CA)n Simple_repeat Simple_repeat 2 31 0 2236 106 3 13 chr10 90466240 90466552 -49850213 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr10 90466765 90466786 -49849979 + AT_rich Low_complexity Low_complexity 1 21 0 237 324 36 43 chr10 90467451 90467590 -49849175 + L2 LINE L2 2399 2536 -778 2426 57 9 28 chr10 90467719 90468036 -49848729 + AluY SINE Alu 1 311 0 2336 240 91 50 chr10 90468051 90468817 -49847948 - MER21B LTR ERV1 -58 805 8 2105 126 0 0 chr10 90468977 90469296 -49847469 + AluSp SINE Alu 2 320 0 373 245 40 147 chr10 90470448 90470721 -49846044 + MIR SINE MIR 11 254 -8 312 272 53 105 chr10 90475371 90475599 -49841166 - L1M2 LINE L1 -5846 1003 788 779 108 125 0 chr10 90476438 90476558 -49840207 + FLAM_C SINE Alu 6 140 -3 1224 127 70 150 chr10 90477255 90477569 -49839196 + AluYb8 SINE Alu 11 299 -19 1948 122 7 11 chr10 90477723 90478029 -49838736 - AluSx SINE Alu 0 305 1 260 303 59 59 chr10 90478159 90478198 -49838567 - MIR SINE MIR -100 162 124 2395 90 3 0 chr10 90478198 90478497 -49838268 + AluSp SINE Alu 1 300 -13 260 303 59 59 chr10 90478497 90478609 -49838156 - MIR SINE MIR -137 125 11 1892 157 0 0 chr10 90478738 90479037 -49837728 - AluJb SINE Alu -8 304 6 22 0 0 0 chr10 90479289 90479311 -49837454 + AT_rich Low_complexity Low_complexity 1 22 0 3719 182 90 16 chr10 90479330 90480447 -49836318 - L1MB7 LINE L1 -216 5968 4716 2313 101 3 3 chr10 90480447 90480745 -49836020 - AluSx SINE Alu -14 298 1 3719 182 90 16 chr10 90480745 90481046 -49835719 - L1MB7 LINE L1 -1468 4716 4439 947 198 59 50 chr10 90481333 90481400 -49835365 - L1MB7 LINE L1 -1697 4449 4384 723 221 0 0 chr10 90481400 90481527 -49835238 - FLAM_A SINE Alu -6 127 1 947 198 59 50 chr10 90481527 90481594 -49835171 - L1MB7 LINE L1 -1762 4384 4319 1651 167 0 18 chr10 90481594 90481869 -49834896 + AluSx SINE Alu 1 270 -42 947 198 59 50 chr10 90481869 90482036 -49834729 - L1MB7 LINE L1 -1827 4319 4144 624 244 26 5 chr10 90482038 90482204 -49834561 - L1MC4a LINE L1 -357 5827 5650 896 174 72 82 chr10 90482301 90482393 -49834372 - AluJo SINE Alu -99 213 122 2208 129 0 3 chr10 90482393 90482696 -49834069 + AluSx SINE Alu 1 302 -10 896 174 72 82 chr10 90482696 90482810 -49833955 - AluJo SINE Alu -190 122 9 2361 90 0 0 chr10 90482897 90483186 -49833579 + AluSc SINE Alu 1 289 -20 31 44 0 0 chr10 90483186 90483231 -49833534 + AT_rich Low_complexity Low_complexity 1 45 0 2414 81 3 13 chr10 90483919 90484226 -49832539 + AluSx SINE Alu 1 304 -8 2158 84 49 3 chr10 90484233 90484518 -49832247 + AluSx SINE Alu 1 298 -14 193 56 28 28 chr10 90484553 90484589 -49832176 + (TAAAAA)n Simple_repeat Simple_repeat 2 37 0 2198 105 7 0 chr10 90484629 90484924 -49831841 - AluSg SINE Alu -13 297 1 481 284 115 60 chr10 90485473 90485857 -49830908 - MLT1L LTR MaLR -8 607 203 2315 95 0 3 chr10 90485967 90486272 -49830493 - AluSq SINE Alu -9 304 1 2238 117 0 3 chr10 90487098 90487407 -49829358 + AluSq SINE Alu 1 308 -5 481 367 80 6 chr10 90487424 90487751 -49829014 - L2 LINE L2 -215 3098 2741 838 154 0 70 chr10 90487821 90487845 -49828920 - FLAM_C SINE Alu -169 133 109 1844 154 10 19 chr10 90487845 90488018 -49828747 - AluSx SINE Alu -3 309 139 2212 104 17 0 chr10 90488018 90488316 -49828449 - AluSp SINE Alu -10 303 1 1844 154 10 19 chr10 90488316 90488454 -49828311 - AluSx SINE Alu -173 139 1 838 154 0 70 chr10 90488454 90488572 -49828193 - FLAM_C SINE Alu -193 109 1 2154 101 10 3 chr10 90489269 90489566 -49827199 - AluSq SINE Alu -14 299 1 1965 134 0 7 chr10 90489973 90490257 -49826508 + AluJo SINE Alu 1 282 -30 186 43 0 0 chr10 90490260 90490283 -49826482 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2191 108 7 3 chr10 90490295 90490591 -49826174 + AluSg SINE Alu 1 297 -13 743 186 59 3 chr10 90490658 90490815 -49825950 + L1M4 LINE L1 4994 5163 -983 2094 125 3 3 chr10 90490815 90491112 -49825653 - AluSx SINE Alu -15 297 1 743 186 59 3 chr10 90491112 90491141 -49825624 + L1M4 LINE L1 5163 5189 -957 24 0 0 0 chr10 90491224 90491248 -49825517 + AT_rich Low_complexity Low_complexity 1 24 0 2076 115 0 43 chr10 90491248 90491571 -49825194 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 90491617 90491646 -49825119 + AT_rich Low_complexity Low_complexity 1 29 0 239 265 72 36 chr10 90491646 90491812 -49824953 - HAL1b LINE L1 -746 602 431 789 154 15 8 chr10 90491866 90491996 -49824769 - AluJo SINE Alu -176 136 6 1797 142 10 43 chr10 90492011 90492313 -49824452 - AluJo SINE Alu -18 294 3 1944 149 7 3 chr10 90492470 90492766 -49823999 + AluJo SINE Alu 1 297 -15 537 165 0 0 chr10 90492773 90492870 -49823895 + (TG)n Simple_repeat Simple_repeat 2 98 0 1021 147 21 69 chr10 90492871 90492983 -49823782 - L1M4 LINE L1 -487 5691 5575 2084 131 3 13 chr10 90492983 90493296 -49823469 - AluSg SINE Alu 0 310 1 1021 147 21 69 chr10 90493296 90493398 -49823367 - L1M4 LINE L1 -603 5575 5479 1210 157 0 0 chr10 90493398 90493570 -49823195 - FAM SINE Alu -3 172 1 1021 147 21 69 chr10 90493570 90493591 -49823174 - L1M4 LINE L1 -699 5479 5459 2145 210 52 70 chr10 90494008 90494085 -49822680 + L1MC4a LINE L1 5865 5942 -1866 2299 101 0 0 chr10 90494085 90494381 -49822384 + AluSg SINE Alu 1 296 -14 2145 210 52 70 chr10 90494381 90494430 -49822335 + L1MC4a LINE L1 5942 5990 -1818 1894 160 21 0 chr10 90494430 90494717 -49822048 + AluSx SINE Alu 1 293 -19 2145 210 52 70 chr10 90494717 90495336 -49821429 + L1MC4a LINE L1 5990 6598 -1210 839 157 0 8 chr10 90495362 90495483 -49821282 + AluJb SINE Alu 1 120 -192 1612 119 0 0 chr10 90495695 90495914 -49820851 - AluSg/x SINE Alu -9 303 85 1050 215 6 0 chr10 90496763 90496940 -49819825 - MER45A DNA AcHobo 0 178 1 1950 114 46 10 chr10 90497001 90497308 -49819457 + THE1C LTR MaLR 1 318 -57 1244 65 76 5 chr10 90497307 90497492 -49819273 - PABL_B LTR ERV1 -221 446 249 * 2301 106 0 10 chr10 90498405 90498717 -49818048 - AluSg SINE Alu -1 309 1 362 302 43 36 chr10 90499271 90499410 -49817355 - MIR3 SINE MIR -49 159 20 6328 41 16 1 chr10 90500285 90501049 -49815716 - L1PA5 LINE L1 -2 6152 5378 234 257 130 58 chr10 90501483 90501822 -49814943 - HAL1 LINE L1 -1042 1465 1152 2726 35 0 3 chr10 90501822 90502134 -49814631 - AluY SINE Alu 0 311 1 234 257 130 58 chr10 90502134 90502321 -49814444 - HAL1 LINE L1 -1355 1152 828 3604 193 22 39 chr10 90502328 90503128 -49813637 - L1MB3 LINE L1 -1 6182 5396 349 233 57 85 chr10 90503112 90503288 -49813477 - HAL1 LINE L1 -1648 859 689 * 8993 170 35 9 chr10 90503285 90506134 -49810631 - L1MA3 LINE L1 0 6305 3379 479 287 48 88 chr10 90506123 90506499 -49810266 - HAL1 LINE L1 -1808 699 339 * 1175 268 32 0 chr10 90506682 90506995 -49809770 + L1M4 LINE L1 3437 3759 -2387 2272 104 0 0 chr10 90506996 90507284 -49809481 + AluSx SINE Alu 1 288 -24 290 235 24 0 chr10 90507284 90507369 -49809396 + L1MC4 LINE L1 6617 6703 -1339 227 321 0 0 chr10 90507388 90507472 -49809293 + L1MC4 LINE L1 6615 6698 -1344 256 259 47 0 chr10 90507476 90507561 -49809204 + L1MC4 LINE L1 6615 6703 -1339 2097 210 38 20 chr10 90507563 90508058 -49808707 + L1M4 LINE L1 3751 4254 -1892 490 295 152 14 chr10 90508743 90508960 -49807805 - MIR SINE MIR -14 248 2 1553 166 42 65 chr10 90509999 90510306 -49806459 - AluJb SINE Alu -12 300 1 22 56 0 0 chr10 90510978 90511014 -49805751 + AT_rich Low_complexity Low_complexity 1 36 0 300 295 31 16 chr10 90511172 90511301 -49805464 - MIR SINE MIR -36 226 96 2211 96 14 0 chr10 90511557 90511848 -49804917 + AluSp SINE Alu 3 297 -16 1015 69 15 0 chr10 90512044 90512174 -49804591 - AluSq/x SINE Alu -180 132 1 1331 139 163 10 chr10 90512479 90512767 -49803998 - L1MA4 LINE L1 -1 6299 5968 501 251 72 18 chr10 90512957 90513124 -49803641 - L1MC4a LINE L1 -1884 5924 5749 1090 191 40 0 chr10 90514153 90514352 -49802413 - MER58A DNA MER1_type -16 208 2 1856 147 17 3 chr10 90514653 90514952 -49801813 + AluSx SINE Alu 1 303 -9 22 35 0 0 chr10 90515437 90515466 -49801299 + AT_rich Low_complexity Low_complexity 1 29 0 209 301 73 49 chr10 90515944 90516067 -49800698 + L2 LINE L2 2918 3043 -229 1485 85 5 0 chr10 90516809 90516997 -49799768 - L1PA5 LINE L1 -2 6152 5964 31 0 0 0 chr10 90516997 90517028 -49799737 + AT_rich Low_complexity Low_complexity 1 31 0 2455 79 0 0 chr10 90517085 90517389 -49799376 - AluY SINE Alu -6 305 2 642 257 40 23 chr10 90519212 90519387 -49797378 + MER5B DNA MER1_type 1 178 0 311 195 78 109 chr10 90519425 90519553 -49797212 + MIR3 SINE MIR 84 207 -1 1260 79 0 0 chr10 90519702 90519854 -49796911 + AluSp SINE Alu 130 281 -32 678 283 0 0 chr10 90519883 90520042 -49796723 + FRAM SINE Alu 2 160 -6 241 252 59 30 chr10 90520528 90520663 -49796102 - Charlie1a DNA MER1_type -15 1440 1302 748 244 6 0 chr10 90520663 90520819 -49795946 - MER20 DNA MER1_type -3 216 60 1785 216 184 32 chr10 90520835 90521001 -49795764 - Charlie1a DNA MER1_type -1487 1274 1135 2136 124 0 0 chr10 90521001 90521300 -49795465 + AluY SINE Alu 1 299 -12 1785 216 184 32 chr10 90521300 90521314 -49795451 - Charlie1a DNA MER1_type -1626 1135 1124 2077 129 3 0 chr10 90521314 90521609 -49795156 + AluSx SINE Alu 5 300 -12 1785 216 184 32 chr10 90521609 90522086 -49794679 - Charlie1a DNA MER1_type -1637 1124 492 1241 175 101 30 chr10 90522086 90522354 -49794411 - AluJo SINE Alu -25 287 1 1785 216 184 32 chr10 90522354 90522421 -49794344 - Charlie1a DNA MER1_type -2269 492 437 978 223 114 11 chr10 90522443 90522716 -49794049 - Charlie1a DNA MER1_type -1069 386 86 2126 112 0 0 chr10 90522782 90523058 -49793707 + AluSq SINE Alu 1 276 -37 326 289 0 12 chr10 90523079 90523162 -49793603 - Charlie1a DNA MER1_type -1373 82 1 1972 104 6 89 chr10 90523960 90524287 -49792478 - AluSg SINE Alu -10 300 1 2103 108 3 7 chr10 90526271 90526567 -49790198 - AluY SINE Alu -3 308 14 980 158 0 18 chr10 90526699 90526863 -49789902 + AluSg/x SINE Alu 134 294 -15 812 172 0 0 chr10 90526867 90526983 -49789782 - FLAM_C SINE Alu -26 117 2 4412 142 28 75 chr10 90526983 90527162 -49789603 + L1MB7 LINE L1 5151 5337 -847 2381 78 0 3 chr10 90527162 90527458 -49789307 + AluY SINE Alu 1 295 -16 4412 142 28 75 chr10 90527458 90527588 -49789177 + L1MB7 LINE L1 5337 5472 -712 1412 146 123 8 chr10 90527588 90527841 -49788924 + AluJb SINE Alu 1 282 -30 191 35 0 35 chr10 90527844 90527873 -49788892 + (TAA)n Simple_repeat Simple_repeat 2 29 0 4412 142 28 75 chr10 90527873 90528250 -49788515 + L1MB7 LINE L1 5474 5780 -404 2250 113 7 0 chr10 90528250 90528559 -49788206 + AluSp SINE Alu 1 311 -2 4412 142 28 75 chr10 90528559 90528919 -49787846 + L1MB7 LINE L1 5780 6156 -28 1876 155 10 0 chr10 90528931 90529227 -49787538 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr10 90529490 90529511 -49787254 + AT_rich Low_complexity Low_complexity 1 21 0 284 28 0 28 chr10 90529511 90529547 -49787218 - U2 snRNA snRNA -153 35 1 355 323 249 30 chr10 90529553 90529647 -49787118 - L2 LINE L2 -604 2710 2638 2356 104 0 0 chr10 90529647 90529955 -49786810 + AluSx SINE Alu 3 310 -2 355 323 249 30 chr10 90529955 90530249 -49786516 - L2 LINE L2 -676 2638 2410 2134 92 3 3 chr10 90530249 90530552 -49786213 - AluSx SINE Alu 0 304 2 355 323 249 30 chr10 90530552 90530626 -49786139 - L2 LINE L2 -904 2410 2144 379 253 55 45 chr10 90530727 90530929 -49785836 - L2 LINE L2 -1395 1919 1716 257 253 162 10 chr10 90531113 90531212 -49785553 + L2 LINE L2 3154 3267 -5 * 680 327 123 35 chr10 90531205 90532207 -49784558 - L2 LINE L2 -1299 2015 926 2296 85 10 0 chr10 90532340 90532633 -49784132 + AluSp SINE Alu 1 296 -17 2111 131 0 16 chr10 90532714 90533020 -49783745 + AluJb SINE Alu 1 301 -11 318 189 63 53 chr10 90533123 90533218 -49783547 - MER103 DNA DNA -1 165 70 260 225 0 75 chr10 90533308 90533388 -49783377 - MIR SINE MIR -158 104 31 240 246 49 0 chr10 90533406 90533467 -49783298 - MER103 DNA DNA -101 65 2 407 125 0 47 chr10 90533828 90533892 -49782873 - FLAM_A SINE Alu -13 129 69 372 293 199 22 chr10 90534051 90534232 -49782533 + MIR SINE MIR 45 257 -5 2280 57 3 63 chr10 90534682 90534997 -49781768 + AluSc SINE Alu 1 296 -13 299 341 123 0 chr10 90535287 90535425 -49781340 + MIR SINE MIR 36 190 -72 1821 116 4 0 chr10 90535431 90535727 -49781038 - AluY SINE Alu 0 318 22 21 71 0 0 chr10 90535779 90535821 -49780944 + AT_rich Low_complexity Low_complexity 1 42 0 1708 123 28 7 chr10 90536272 90536557 -49780208 + AluSp SINE Alu 3 293 -20 1866 157 7 0 chr10 90536626 90536919 -49779846 - AluSx SINE Alu -17 295 1 251 259 0 0 chr10 90536920 90536978 -49779787 + MIR SINE MIR 56 113 -149 2063 139 7 7 chr10 90537251 90537561 -49779204 - AluSx SINE Alu -2 310 1 189 0 0 0 chr10 90537670 90537691 -49779074 + (A)n Simple_repeat Simple_repeat 1 21 0 1503 82 0 10 chr10 90537889 90538083 -49778682 - MER107 DNA MER1_type -2 195 4 2444 88 0 0 chr10 90538265 90538573 -49778192 - AluY SINE Alu -3 308 1 886 88 53 0 chr10 90538576 90538690 -49778075 - AluSq/x SINE Alu -179 133 14 1044 181 106 0 chr10 90538795 90538994 -49777771 - AluSg/x SINE Alu -9 301 82 441 189 0 0 chr10 90539044 90539118 -49777647 - L1MB4 LINE L1 -66 6114 6041 733 221 34 0 chr10 90539118 90539267 -49777498 + MSTB LTR MaLR 1 154 -272 2034 138 3 0 chr10 90539699 90539988 -49776777 + AluJb SINE Alu 8 297 -15 1860 162 10 0 chr10 90540184 90540480 -49776285 - AluJb SINE Alu -13 299 1 2198 112 3 6 chr10 90540891 90541205 -49775560 + AluSq SINE Alu 1 313 0 1419 55 0 0 chr10 90541205 90541369 -49775396 + AluSq SINE Alu 124 287 -26 1748 192 7 3 chr10 90541513 90541815 -49774950 - AluJo SINE Alu -7 305 3 225 275 17 142 chr10 90542308 90542428 -49774337 - L2 LINE L2 -2 3270 3166 420 292 8 25 chr10 90543168 90543288 -49773477 - MIR SINE MIR -35 227 110 321 266 98 35 chr10 90543525 90543698 -49773067 - HAL1 LINE L1 -27 2480 2297 376 254 134 38 chr10 90543712 90544281 -49772484 - HAL1 LINE L1 -478 2029 1346 211 163 0 41 chr10 90544283 90544332 -49772433 + T-rich Low_complexity Low_complexity 2 48 0 1034 144 11 17 chr10 90544337 90544511 -49772254 - AluSg/x SINE Alu -7 305 133 233 0 62 0 chr10 90544511 90544543 -49772222 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2101 105 7 7 chr10 90544543 90544828 -49771937 - AluSx SINE Alu -27 285 1 555 281 99 0 chr10 90544829 90545050 -49771715 - HAL1 LINE L1 -1153 1354 1112 1074 195 127 8 chr10 90545100 90545336 -49771429 - AluJo SINE Alu -26 286 23 23 0 0 0 chr10 90545390 90545413 -49771352 + AT_rich Low_complexity Low_complexity 1 23 0 1812 262 105 27 chr10 90545431 90546202 -49770563 - HAL1 LINE L1 -1534 973 143 1626 197 14 0 chr10 90546226 90546521 -49770244 + AluJb SINE Alu 1 299 -13 4911 162 27 15 chr10 90546648 90547623 -49769142 - L1MB5 LINE L1 -9 6165 5185 1911 146 4 0 chr10 90547931 90548242 -49768523 + AluJb SINE Alu 2 313 0 255 285 80 100 chr10 90548312 90548561 -49768204 - MIR SINE MIR -14 248 5 36 0 0 0 chr10 90548608 90548644 -49768121 + AT_rich Low_complexity Low_complexity 1 36 0 620 262 142 26 chr10 90549331 90549598 -49767167 - L2 LINE L2 -47 3266 2969 601 291 44 62 chr10 90549598 90550003 -49766762 + L1MCc LINE L1 17 414 -6009 6728 145 44 79 chr10 90550465 90550931 -49765834 - L1MC3 LINE L1 0 7785 7304 1774 163 3 29 chr10 90550931 90551237 -49765528 - AluJo SINE Alu -13 299 2 6728 145 44 79 chr10 90551237 90552205 -49764560 - L1MC3 LINE L1 -481 7304 6401 1007 287 18 43 chr10 90552328 90552789 -49763976 + L1MCc LINE L1 1129 1586 -4887 237 178 0 0 chr10 90552804 90552849 -49763916 + GA-rich Low_complexity Low_complexity 3 47 0 822 234 88 65 chr10 90552849 90553281 -49763484 + L1MCc LINE L1 1760 2201 -4921 450 125 0 42 chr10 90553389 90553461 -49763304 + FLAM_A SINE Alu 63 131 -11 2243 96 20 7 chr10 90553463 90553766 -49762999 + AluSc SINE Alu 3 309 0 610 232 100 19 chr10 90553776 90554139 -49762626 + L1MCc LINE L1 2271 2782 -4159 1828 251 128 46 chr10 90554154 90554984 -49761781 + L1MEc LINE L1 475 1372 -5453 1445 141 15 0 chr10 90555064 90555270 -49761495 + AluSg/x SINE Alu 82 290 -22 806 230 19 49 chr10 90555272 90555572 -49761193 + L1MEc LINE L1 1371 1590 -4952 1995 151 6 6 chr10 90555575 90555887 -49760878 + AluSx SINE Alu 1 312 0 683 177 115 0 chr10 90555900 90556013 -49760752 + FLAM_C SINE Alu 8 133 -10 338 314 17 0 chr10 90556014 90556132 -49760633 + L1MEc LINE L1 1583 1702 -4840 1349 163 87 73 chr10 90556135 90556435 -49760330 + AluJb SINE Alu 2 305 -7 1669 165 14 18 chr10 90556435 90556720 -49760045 + AluJb SINE Alu 1 284 -28 1503 119 53 9 chr10 90556775 90557001 -49759764 - AluSq SINE Alu -12 301 66 1053 168 37 66 chr10 90557001 90557185 -49759580 + L1MA6 LINE L1 6063 6240 -60 2299 112 0 0 chr10 90557185 90557481 -49759284 + AluSx SINE Alu 1 296 -16 1053 168 37 66 chr10 90557481 90557540 -49759225 + L1MA6 LINE L1 6240 6299 -1 22 0 0 0 chr10 90557571 90557593 -49759172 + AT_rich Low_complexity Low_complexity 1 22 0 669 282 5 19 chr10 90557943 90558149 -49758616 - L2 LINE L2 -707 2607 2405 208 246 0 0 chr10 90558191 90558248 -49758517 + T-rich Low_complexity Low_complexity 1 57 0 1755 173 3 37 chr10 90558352 90558675 -49758090 - AluJb SINE Alu 0 312 1 350 294 71 8 chr10 90559157 90559283 -49757482 + MER94 DNA DNA 1 134 0 2268 106 3 3 chr10 90559288 90559599 -49757166 - AluY SINE Alu 0 311 1 2572 54 0 13 chr10 90560053 90560366 -49756399 - AluY SINE Alu -2 309 1 2203 56 0 4 chr10 90560371 90560638 -49756127 - AluY SINE Alu -6 305 40 233 297 0 14 chr10 90560846 90560920 -49755845 - MIR SINE MIR -184 78 6 732 162 0 9 chr10 90561628 90561739 -49755026 - MER30 DNA MER1_type -1 229 120 1179 113 0 0 chr10 90561739 90561898 -49754867 - AluSx SINE Alu -21 289 131 1109 80 0 7 chr10 90561998 90562136 -49754629 - AluSx SINE Alu -176 137 1 768 122 16 8 chr10 90562136 90562259 -49754506 - MER30 DNA MER1_type -106 124 1 2382 106 3 0 chr10 90562318 90562629 -49754136 + AluSp SINE Alu 2 313 0 210 294 70 7 chr10 90562754 90562897 -49753868 - L2 LINE L2 -1023 2291 2140 1956 121 61 0 chr10 90563413 90563693 -49753072 - AluSx SINE Alu -15 297 1 250 292 241 7 chr10 90563694 90563831 -49752934 + L2 LINE L2 3102 3270 -2 334 316 112 24 chr10 90563879 90564085 -49752680 - L2 LINE L2 -1279 2035 1812 1006 184 0 0 chr10 90564137 90564305 -49752460 + FRAM SINE Alu 1 166 -10 1177 177 23 9 chr10 90764497 90764712 -49552053 - AluJo SINE Alu -6 306 89 936 146 12 0 chr10 90764719 90764883 -49551882 + MSTB1 LTR MaLR 23 188 -244 604 154 0 0 chr10 90764901 90764992 -49551773 - AluJo SINE Alu -221 91 1 1518 141 12 0 chr10 90764993 90765235 -49551530 + MSTB1 LTR MaLR 175 419 -13 1861 155 30 33 chr10 90765252 90765645 -49551120 - L1MB4 LINE L1 -32 6148 5757 872 153 0 0 chr10 90765655 90765786 -49550979 - AluSq/x SINE Alu -181 131 1 7369 211 46 42 chr10 90765786 90765910 -49550855 - L1MB4 LINE L1 -405 5769 5647 2205 146 53 15 chr10 90765910 90766322 -49550443 - MSTA LTR MaLR 0 428 1 7369 211 46 42 chr10 90766322 90766679 -49550086 - L1MB4 LINE L1 -527 5647 5293 285 119 0 0 chr10 90766679 90766721 -49550044 - MSTA LTR MaLR 0 428 387 7369 211 46 42 chr10 90766721 90768841 -49547924 - L1MB4 LINE L1 -881 5293 3118 2332 147 50 12 chr10 90769244 90769660 -49547105 + MSTB1 LTR MaLR 1 432 0 556 288 82 16 chr10 90770176 90770419 -49546346 - MLT1L LTR MaLR -33 582 324 468 339 31 39 chr10 90770715 90770975 -49545790 + L2 LINE L2 719 976 -2338 694 251 101 16 chr10 90770985 90771232 -49545533 - MLT1L LTR MaLR -337 278 11 311 348 12 37 chr10 90771371 90771535 -49545230 + MIR SINE MIR 49 208 -54 901 165 0 49 chr10 90772135 90772299 -49544466 + AluSc SINE Alu 128 283 -26 2557 45 0 10 chr10 90772786 90773094 -49543671 + AluY SINE Alu 1 305 -6 500 312 55 15 chr10 90773811 90774010 -49542755 - MIR SINE MIR -37 225 19 2308 107 0 7 chr10 90774171 90774471 -49542294 - AluSq SINE Alu -15 298 1 386 363 84 16 chr10 90774777 90775097 -49541668 + L2 LINE L2 1286 1627 -1687 362 197 263 36 chr10 90775607 90775744 -49541021 - MIR SINE MIR -82 180 13 254 294 10 49 chr10 90777086 90777188 -49539577 - MER5A DNA MER1_type -89 100 3 306 256 122 79 chr10 90777540 90777794 -49538971 + L1M2 LINE L1 702 966 -5883 218 299 52 41 chr10 90778499 90778596 -49538169 - L2 LINE L2 0 3313 3216 256 297 0 0 chr10 90778970 90779034 -49537731 - MIR3 SINE MIR -33 175 112 595 303 138 9 chr10 90779132 90779363 -49537402 - MIR SINE MIR 0 262 2 21 0 0 0 chr10 90780473 90780494 -49536271 + AT_rich Low_complexity Low_complexity 1 21 0 440 195 168 26 chr10 90781789 90781902 -49534863 + MER94 DNA DNA 3 131 -3 245 216 0 0 chr10 90782152 90782203 -49534562 - MER5B DNA MER1_type -7 171 121 841 286 27 31 chr10 90782733 90782992 -49533773 + MIR SINE MIR 2 259 -3 310 282 146 9 chr10 90783240 90783350 -49533415 - L1MC/D LINE L1 -2042 5766 5642 890 150 7 0 chr10 90783358 90783498 -49533267 + AluJb SINE Alu 1 141 -171 689 278 95 26 chr10 90783530 90783918 -49532847 - L1MC/D LINE L1 -451 5670 5256 367 310 111 5 chr10 90783955 90784171 -49532594 - L1MC/D LINE L1 -892 5254 5016 265 265 245 26 chr10 90784294 90784445 -49532320 - MIR3 SINE MIR -20 188 5 203 308 8 34 chr10 90785128 90785245 -49531520 + CT-rich Low_complexity Low_complexity 2 115 0 757 126 25 0 chr10 90785477 90785596 -49531169 + FRAM SINE Alu 46 167 -9 339 328 162 15 chr10 90785608 90785812 -49530953 - L3 LINE CR1 -193 1384 1151 21 0 0 0 chr10 90785994 90786015 -49530750 + AT_rich Low_complexity Low_complexity 1 21 0 263 320 64 16 chr10 90786246 90786371 -49530394 - MIR3 SINE MIR -10 198 68 1521 193 104 89 chr10 90786399 90786479 -49530286 - L1MC4 LINE L1 -48 7994 7917 1826 194 111 40 chr10 90786479 90786948 -49529817 - MLT1D LTR MaLR 0 505 4 1521 193 104 89 chr10 90786948 90787471 -49529294 - L1MC4 LINE L1 -125 7917 7377 2125 121 0 0 chr10 90787471 90787760 -49529005 - AluSx SINE Alu -23 289 1 1521 193 104 89 chr10 90787760 90787839 -49528926 - L1MC4 LINE L1 -665 7377 7301 2352 113 0 0 chr10 90787849 90788159 -49528606 + AluSx SINE Alu 1 310 -2 489 226 59 21 chr10 90788372 90788558 -49528207 + L1MC5 LINE L1 7720 7912 -49 2382 92 0 0 chr10 90788567 90788873 -49527892 - AluSx SINE Alu -6 306 1 258 301 72 12 chr10 90788952 90789035 -49527730 - L2 LINE L2 -9 3263 3176 403 198 25 0 chr10 90789119 90789200 -49527565 - Tigger5 DNA MER2_type 0 2323 2241 297 218 0 0 chr10 90789195 90789250 -49527515 + Tigger5 DNA MER2_type 2264 2318 -5 * 410 211 0 0 chr10 90789252 90789328 -49527437 - Tigger5 DNA MER2_type -2245 78 3 292 204 28 65 chr10 90789633 90789741 -49527024 - L1PA13 LINE L1 -216 5954 5851 1136 114 0 0 chr10 90789742 90789917 -49526848 + L1PA13 LINE L1 5928 6102 -61 356 245 90 19 chr10 90790122 90790277 -49526488 + L1ME1 LINE L1 5996 6161 -5 551 267 59 0 chr10 90790296 90790483 -49526282 - L1ME3A LINE L1 -318 5852 5655 1450 131 0 0 chr10 90790508 90790706 -49526059 - AluSq SINE Alu -115 198 1 2446 71 0 0 chr10 90790706 90791003 -49525762 - AluY SINE Alu -14 297 1 21 0 0 0 chr10 90791004 90791025 -49525740 + AT_rich Low_complexity Low_complexity 1 21 0 2845 142 84 16 chr10 90791198 90791949 -49524816 - MER21A LTR ERV1 -6 925 1 2111 183 34 11 chr10 90791949 90792387 -49524378 - MER21A-int LTR ERV1 0 4191 3744 198 0 0 0 chr10 90792802 90792824 -49523941 + (TG)n Simple_repeat Simple_repeat 2 23 0 686 250 83 44 chr10 90792829 90793227 -49523538 - L1MC4a LINE L1 -246 5924 5500 24 67 0 0 chr10 90793734 90793779 -49522986 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr10 90794015 90794038 -49522727 + AT_rich Low_complexity Low_complexity 1 23 0 447 274 91 19 chr10 90794300 90794508 -49522257 - L1ME3A LINE L1 -251 5919 5697 593 172 0 0 chr10 90794636 90794729 -49522036 - AluJ/FLAM SINE Alu -219 93 1 286 244 82 30 chr10 90794735 90794870 -49521895 + L1ME1 LINE L1 6021 6162 -4 1833 157 30 47 chr10 90795134 90795167 -49521598 - L1MB7 LINE L1 0 6184 6152 13452 117 47 60 chr10 90795167 90796095 -49520670 - Tigger1 DNA MER2_type -1 2417 1478 2079 60 4 34 chr10 90796095 90796364 -49520401 - AluY SINE Alu -12 299 39 13452 117 47 60 chr10 90796364 90797884 -49518881 - Tigger1 DNA MER2_type -940 1478 1 1833 157 30 47 chr10 90797884 90798276 -49518489 - L1MB7 LINE L1 -32 6152 5766 7672 52 40 0 chr10 90798284 90800054 -49516711 - L1PA5 LINE L1 0 6154 4353 28156 75 25 3 chr10 90800054 90804057 -49512708 - L1PA5 LINE L1 -2033 4113 26 1666 147 112 0 chr10 90804367 90804680 -49512085 + MER46B DNA MER2_type 13 235 -1 205 288 68 14 chr10 90804687 90804760 -49512005 + MIR SINE MIR 157 233 -29 432 229 6 0 chr10 90805543 90805642 -49511123 - L1MC1 LINE L1 -9 6335 6228 2241 103 0 31 chr10 90806787 90807107 -49509658 - AluSx SINE Alu -2 310 1 199 325 48 0 chr10 90807109 90807192 -49509573 + L2 LINE L2 2210 2296 -1018 376 352 63 7 chr10 90807475 90807617 -49509148 + L3 LINE CR1 1377 1526 -51 416 352 71 28 chr10 90807652 90807905 -49508860 - L2 LINE L2 -1 3271 3008 1849 141 0 3 chr10 90808390 90808694 -49508071 + AluJb SINE Alu 1 303 0 641 155 74 14 chr10 90809144 90809159 -49507606 - L1MA10 LINE L1 -2 6332 6318 2494 208 133 19 chr10 90809159 90809679 -49507086 - L1ME1 LINE L1 -8 6158 5699 2214 129 0 0 chr10 90809679 90809981 -49506784 - AluSx SINE Alu -10 302 1 2494 208 133 19 chr10 90809981 90810252 -49506513 - L1ME1 LINE L1 -467 5699 5460 354 23 0 0 chr10 90810252 90810295 -49506470 + (TG)n Simple_repeat Simple_repeat 2 44 0 2494 208 133 19 chr10 90810295 90810367 -49506398 - L1ME1 LINE L1 -706 5460 5198 23 0 0 0 chr10 90810368 90810391 -49506374 + AT_rich Low_complexity Low_complexity 1 23 0 289 238 71 32 chr10 90810391 90810517 -49506248 - L1MEc LINE L1 -5762 634 504 1042 188 0 0 chr10 90810517 90810682 -49506083 - AluJb SINE Alu -15 297 133 352 175 144 0 chr10 90810726 90810823 -49505942 - FLAM_A SINE Alu -1 132 22 948 238 147 10 chr10 90810886 90811273 -49505492 - L1MEc LINE L1 -5918 478 39 1839 155 16 13 chr10 90812610 90812914 -49503851 - AluJo SINE Alu -7 305 1 286 108 31 0 chr10 90813173 90813238 -49503527 + CT-rich Low_complexity Low_complexity 2 68 0 279 0 0 0 chr10 90813240 90813271 -49503494 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 152 61 0 chr10 90814237 90814303 -49502462 - MER21A LTR ERV1 0 931 862 2295 159 54 10 chr10 90814308 90814716 -49502049 - MSTB LTR MaLR 0 426 1 1605 139 39 32 chr10 90814722 90815032 -49501733 - MSTB-int LTR MaLR -6 1645 1334 1596 190 37 3 chr10 90815044 90815344 -49501421 - AluJb SINE Alu -2 310 1 1144 115 45 10 chr10 90815375 90815575 -49501190 + MSTA LTR MaLR 222 428 0 1719 190 23 8 chr10 90815575 90816115 -49500650 + MSTA-int LTR MaLR 3 598 -1050 1423 175 4 8 chr10 90816115 90816355 -49500410 + AluJb SINE Alu 1 239 -73 22 0 0 0 chr10 90816446 90816468 -49500297 + AT_rich Low_complexity Low_complexity 1 22 0 1264 124 55 0 chr10 90816488 90816690 -49500075 - MSTB LTR MaLR -213 213 1 3363 168 122 26 chr10 90816690 90817421 -49499344 - MER21B LTR ERV1 -60 803 3 306 291 0 23 chr10 90818479 90818565 -49498200 - MER117 DNA MER1_type -86 111 28 2205 160 5 66 chr10 90818707 90819226 -49497539 - MER41B LTR ERV1 -20 615 132 1746 181 0 19 chr10 90819389 90819698 -49497067 + AluJb SINE Alu 1 303 -9 1390 207 15 8 chr10 90819864 90820130 -49496635 - AluSx SINE Alu -20 292 25 197 234 169 0 chr10 90820457 90820534 -49496231 + MIR SINE MIR 24 113 -95 202 277 108 0 chr10 90820732 90820815 -49495950 - L3 LINE CR1 -1302 275 184 34 0 0 0 chr10 90821393 90821427 -49495338 + AT_rich Low_complexity Low_complexity 1 34 0 583 268 58 0 chr10 90822185 90822375 -49494390 + MER33 DNA MER1_type 1 201 -123 560 260 28 78 chr10 90822704 90823023 -49493742 - MER102b DNA MER1_type -12 329 27 23 33 0 0 chr10 90824066 90824096 -49492669 + AT_rich Low_complexity Low_complexity 1 30 0 3517 55 0 2 chr10 90826235 90826674 -49490091 - L1PA5 LINE L1 -1 6153 5716 1574 165 62 17 chr10 90830002 90830293 -49486472 - AluJo SINE Alu -8 304 1 1840 160 13 22 chr10 90830734 90831046 -49485719 - AluJo SINE Alu 0 312 4 5587 101 27 14 chr10 90831746 90832605 -49484160 + MER4D LTR ERV1 1 870 -2 295 248 99 0 chr10 90832836 90832937 -49483828 - MIR SINE MIR -34 228 118 2176 125 3 10 chr10 90833049 90833354 -49483411 - AluSx SINE Alu -9 303 1 2375 162 114 9 chr10 90835275 90835732 -49481033 + LTR10B LTR ERV1 1 505 0 441 155 155 10 chr10 90835795 90835892 -49480873 - HY1 scRNA scRNA -1 111 1 685 215 0 0 chr10 90835921 90836051 -49480714 - FLAM_A SINE Alu 0 133 4 444 156 0 92 chr10 90836166 90836275 -49480490 - L1M LINE L1 -785 5381 5300 6834 169 99 8 chr10 90836281 90839127 -49477638 + L1MA4A LINE L1 15 3220 -3628 659 234 0 0 chr10 90839129 90839253 -49477512 + FRAM SINE Alu 1 124 -52 2083 180 75 5 chr10 90839253 90839653 -49477112 + MSTA LTR MaLR 1 428 0 9375 171 13 6 chr10 90839653 90841292 -49475473 + MSTA-int LTR MaLR 1 1651 0 1058 213 100 16 chr10 90841294 90841604 -49475161 + MSTA LTR MaLR 3 338 -90 905 142 41 30 chr10 90841735 90841904 -49474861 + MSTA LTR MaLR 256 426 -2 283 75 0 0 chr10 90841907 90841947 -49474818 + Alu SINE Alu 257 296 -6 12019 164 24 30 chr10 90841953 90844978 -49471787 + L1MA4A LINE L1 3215 6212 -793 2253 113 0 0 chr10 90844978 90845269 -49471496 + AluSg SINE Alu 1 291 -19 12019 164 24 30 chr10 90845269 90846059 -49470706 + L1MA4A LINE L1 6212 7005 0 349 191 48 0 chr10 90846069 90846174 -49470591 - L1M4 LINE L1 -843 5303 5194 * 1809 244 42 20 chr10 90846158 90846757 -49470008 - L1ME3A LINE L1 -280 6388 5777 252 243 19 37 chr10 90846862 90846969 -49469796 - L1ME3A LINE L1 -4934 1608 1504 463 306 63 45 chr10 90846986 90847319 -49469446 - L1ME3A LINE L1 -5010 1624 1286 21 0 0 0 chr10 90847326 90847347 -49469418 + AT_rich Low_complexity Low_complexity 1 21 0 1673 73 0 4 chr10 90847348 90847581 -49469184 - L1MA2 LINE L1 -1 6303 6072 6981 147 17 11 chr10 90847581 90848904 -49467861 - L1 LINE L1 -1278 4868 3537 1623 199 87 115 chr10 90848904 90849616 -49467149 + LTR1B LTR ERV1 55 746 -80 247 178 0 22 chr10 90850124 90850169 -49466596 + L2 LINE L2 3250 3293 -20 2159 118 7 0 chr10 90850216 90850504 -49466261 + AluSg SINE Alu 1 290 -20 1835 151 24 15 chr10 90850521 90850602 -49466163 - MER2 DNA MER2_type -1 343 264 1659 191 3 20 chr10 90850602 90850900 -49465865 + AluJo SINE Alu 1 293 -19 1835 151 24 15 chr10 90850900 90851156 -49465609 - MER2 DNA MER2_type -80 264 3 625 265 93 9 chr10 90851884 90852099 -49464666 - MIR SINE MIR -22 240 8 2871 122 2 4 chr10 90853190 90853641 -49463124 - L1PA16 LINE L1 -296 5870 5421 238 141 0 125 chr10 90853641 90853705 -49463060 + MER53 DNA DNA 62 117 -72 2320 109 26 113 chr10 90854038 90854414 -49462351 - MSTC LTR MaLR 0 428 99 1953 149 17 3 chr10 90854414 90854709 -49462056 - AluJb SINE Alu -13 299 1 2320 109 26 113 chr10 90854709 90854801 -49461964 - MSTC LTR MaLR -329 99 1 374 284 103 0 chr10 90855134 90855250 -49461515 + L2 LINE L2 3186 3313 0 616 276 138 26 chr10 90855478 90855746 -49461019 + L2 LINE L2 3016 3313 0 2106 226 45 23 chr10 90856179 90856741 -49460024 + L1MC4a LINE L1 5366 5939 -1869 189 0 0 0 chr10 90856746 90856767 -49459998 + (TA)n Simple_repeat Simple_repeat 2 22 0 32 0 0 0 chr10 90856851 90856883 -49459882 + AT_rich Low_complexity Low_complexity 1 32 0 3667 96 19 9 chr10 90856883 90857414 -49459351 - L1PA11 LINE L1 -4 6170 5635 1643 175 7 10 chr10 90857414 90857711 -49459054 - AluJb SINE Alu -16 296 1 373 294 59 35 chr10 90857715 90857885 -49458880 + L1MC4a LINE L1 6098 6271 -1537 1161 214 107 3 chr10 90858125 90858501 -49458264 + L1MC4 LINE L1 6563 6916 -892 279 222 61 10 chr10 90858574 90858673 -49458092 + L1MC5 LINE L1 6957 7060 -901 334 261 67 22 chr10 90858691 90858825 -49457940 + MLT1J LTR MaLR 372 511 0 2377 151 80 9 chr10 90858880 90859345 -49457420 - LTR44 LTR ERV1 -3 516 19 700 146 0 9 chr10 90859861 90859971 -49456794 - FLAM_C SINE Alu -10 133 25 461 247 73 73 chr10 90860070 90860345 -49456420 + MLT1D LTR MaLR 18 292 -213 360 310 81 73 chr10 90860536 90861028 -49455737 - HAL1b LINE L1 -944 1399 88 1266 223 132 0 chr10 90861890 90862262 -49454503 - LTR16A LTR ERVL -5 445 25 271 244 12 131 chr10 90863049 90863060 -49453705 - Charlie8 DNA MER1_type -2269 148 137 3656 73 4 4 chr10 90863060 90863551 -49453214 - L1PA7 LINE L1 -6 6148 5658 271 244 12 131 chr10 90863551 90863707 -49453058 - Charlie8 DNA MER1_type -2280 137 1 1016 144 74 59 chr10 90864354 90864610 -49452155 + L1MB5 LINE L1 5383 5642 -542 345 172 0 0 chr10 90864611 90864675 -49452090 + (TG)n Simple_repeat Simple_repeat 2 65 0 344 261 0 22 chr10 90864679 90864771 -49451994 + L1MC4 LINE L1 6614 6703 -1339 1009 186 18 9 chr10 90864778 90865004 -49451761 + L1MB5 LINE L1 5643 5870 -304 382 297 40 7 chr10 90865011 90865159 -49451606 - HAL1 LINE L1 -1216 1291 1139 1979 155 3 7 chr10 90865514 90865818 -49450947 - AluSx SINE Alu -9 303 1 1836 215 81 66 chr10 90867836 90868367 -49448398 - MLT1H LTR MaLR -8 541 3 26 0 0 0 chr10 90868529 90868555 -49448210 + AT_rich Low_complexity Low_complexity 1 26 0 568 277 133 42 chr10 90869282 90869567 -49447198 - MLT1L LTR MaLR -88 527 217 787 232 17 11 chr10 90869732 90869909 -49446856 + MER45A DNA AcHobo 1 178 0 529 266 52 17 chr10 90870146 90870319 -49446446 + LTR16C LTR ERVL 299 477 -14 448 303 86 11 chr10 90870495 90870670 -49446095 - MIR SINE MIR -27 235 48 1732 169 0 30 chr10 90870825 90871126 -49445639 + AluJb SINE Alu 1 292 -20 931 203 11 6 chr10 90871770 90871952 -49444813 - AluJo SINE Alu -8 304 122 1593 187 0 17 chr10 90871978 90872272 -49444493 - AluJb SINE Alu -20 292 4 261 0 0 0 chr10 90872292 90872321 -49444444 + (TA)n Simple_repeat Simple_repeat 2 30 0 1748 163 10 3 chr10 90872321 90872610 -49444155 - AluJo SINE Alu -21 291 1 626 233 161 36 chr10 90872723 90873058 -49443707 - Charlie7 DNA MER1_type -1 2611 2235 4847 175 22 1 chr10 90873097 90874387 -49442378 - L1MB7 LINE L1 -77 6107 4790 1365 217 53 37 chr10 90874390 90874827 -49441938 - Charlie7 DNA MER1_type -373 2239 1796 2430 62 0 0 chr10 90874897 90875188 -49441577 + AluY SINE Alu 2 292 -19 3043 92 6 5 chr10 90875213 90875620 -49441145 + MLT2A1 LTR ERVL 1 524 -30 1501 206 4 0 chr10 90875691 90875967 -49440798 + AluJo SINE Alu 2 278 -34 206 32 32 0 chr10 90875970 90876001 -49440764 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 643 244 63 43 chr10 90876170 90876424 -49440341 - L1MEd LINE L1 -4866 1253 995 344 117 67 0 chr10 90876432 90876492 -49440273 + MER89 LTR ERV1 2 65 -494 787 165 23 0 chr10 90876585 90876718 -49440047 - FLAM_C SINE Alu 0 143 8 1202 217 33 23 chr10 90876726 90877025 -49439740 + MER89 LTR ERV1 249 550 -9 466 278 78 51 chr10 90877083 90877418 -49439347 - L1MEd LINE L1 -5184 935 592 1939 168 7 0 chr10 90879256 90879559 -49437206 - AluJo SINE Alu -7 305 1 452 267 33 0 chr10 90879912 90880032 -49436733 + MIR SINE MIR 122 245 -17 736 188 58 92 chr10 90880103 90880266 -49436499 + LTR37A LTR ERV1 41 195 -231 1081 111 25 6 chr10 90880266 90880428 -49436337 - L1PA15 LINE L1 0 6165 6001 736 188 58 92 chr10 90880428 90880504 -49436261 + LTR37A LTR ERV1 195 272 -154 414 162 14 0 chr10 90880552 90880626 -49436139 + L1MB8 LINE L1 6103 6177 -1 800 153 145 60 chr10 90881912 90882130 -49434635 + ORSL DNA AcHobo 1 244 -31 3937 104 35 0 chr10 90882130 90882639 -49434126 + MER1A DNA MER1_type 1 527 0 800 153 145 60 chr10 90882639 90882669 -49434096 + ORSL DNA AcHobo 244 270 -5 2304 102 0 3 chr10 90882709 90883013 -49433752 + AluSx SINE Alu 1 303 -9 2266 128 48 31 chr10 90883027 90883385 -49433380 + THE1B LTR MaLR 1 364 0 12214 100 11 3 chr10 90883385 90884952 -49431813 + THE1B-int LTR MaLR 1 1580 0 1646 156 89 73 chr10 90884952 90885257 -49431508 + THE1B LTR MaLR 1 314 -50 2101 106 46 0 chr10 90885257 90885539 -49431226 + AluSc SINE Alu 1 295 -14 1646 156 89 73 chr10 90885539 90885591 -49431174 + THE1B LTR MaLR 314 364 0 914 241 62 21 chr10 90885593 90885834 -49430931 + MIR SINE MIR 11 261 -1 1619 203 17 3 chr10 90885964 90886265 -49430500 + AluJb SINE Alu 2 306 -6 1347 327 148 23 chr10 90886390 90887013 -49429752 - L3 LINE CR1 -2 1575 1031 2167 171 118 0 chr10 90887013 90887394 -49429371 - MSTB LTR MaLR 0 426 1 1347 327 148 23 chr10 90887394 90887756 -49429009 - L3 LINE CR1 -546 1031 467 273 311 58 73 chr10 90887801 90887943 -49428822 - MER5A DNA MER1_type 0 189 38 1959 139 26 3 chr10 90887943 90888246 -49428519 + AluJb SINE Alu 1 310 -2 358 234 234 0 chr10 90888302 90888447 -49428318 + MER5A DNA MER1_type 10 188 -1 203 195 24 0 chr10 90888485 90888526 -49428239 + GA-rich Low_complexity Low_complexity 2 43 0 516 302 6 17 chr10 90888569 90888721 -49428044 + MIR SINE MIR 92 243 -19 2057 187 46 26 chr10 90888721 90889176 -49427589 + MLT1C LTR MaLR 1 464 -3 516 302 6 17 chr10 90889176 90889195 -49427570 + MIR SINE MIR 243 261 -1 268 331 72 28 chr10 90889345 90889526 -49427239 - L2 LINE L2 -167 3105 2917 251 232 196 54 chr10 90890164 90890276 -49426489 - L2 LINE L2 -1 3312 3185 1119 283 97 17 chr10 90890330 90890619 -49426146 - LTR33 LTR ERVL -9 512 169 2112 127 35 127 chr10 90890619 90891075 -49425690 + MLT2D LTR ERVL 1 414 0 1119 283 97 17 chr10 90891075 90891258 -49425507 - LTR33 LTR ERVL -352 169 2 324 337 65 84 chr10 90891396 90891826 -49424939 + L2 LINE L2 2827 3248 -24 878 154 0 0 chr10 90891850 90891973 -49424792 + AluJo SINE Alu 2 124 -178 749 129 9 9 chr10 90891997 90892161 -49424604 + AluJo SINE Alu 197 360 0 321 223 98 36 chr10 90893190 90893302 -49423463 + MLT1K LTR MaLR 468 586 -2 295 292 108 15 chr10 90893954 90894084 -49422681 + L1ME LINE L1 5602 5743 -378 1590 199 3 45 chr10 90894135 90894471 -49422294 - AluJb SINE Alu 0 326 3 23 33 0 0 chr10 90894479 90894509 -49422256 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 90894578 90894601 -49422164 + AT_rich Low_complexity Low_complexity 1 23 0 184 329 63 25 chr10 90894753 90894832 -49421933 + MIR3 SINE MIR 113 194 -14 419 291 113 48 chr10 90895010 90895468 -49421297 - MLT1K LTR MaLR -62 526 10 183 232 12 61 chr10 90895473 90895555 -49421210 + L2 LINE L2 3194 3271 -1 616 285 34 25 chr10 90896251 90896486 -49420279 - L1MC4a LINE L1 -1839 5969 5733 375 105 0 0 chr10 90896493 90896550 -49420215 + Alu SINE Alu 244 300 0 2322 141 19 11 chr10 90896707 90897084 -49419681 + MER57A LTR ERV1 12 391 -12 3676 183 19 101 chr10 90897085 90898009 -49418756 + MER57A-int LTR ERV1 1 849 -6688 221 159 0 0 chr10 90898192 90898236 -49418529 + A-rich Low_complexity Low_complexity 1 44 0 379 121 0 0 chr10 90898290 90898348 -49418417 + MER34C LTR ERV1 155 212 -373 660 204 8 160 chr10 90898383 90898745 -49418020 + MER57A-int LTR ERV1 1093 1399 -3724 251 242 0 0 chr10 90898761 90898823 -49417942 + MER57A-int LTR ERV1 1508 1569 -217 682 164 0 191 chr10 90898837 90899093 -49417672 + MER57A-int LTR ERV1 3247 3453 -2878 1519 177 102 4 chr10 90899238 90899503 -49417262 - AluJo SINE Alu -21 291 1 7184 185 70 65 chr10 90899504 90900216 -49416549 + MER57A-int LTR ERV1 1725 2432 -4887 2005 145 34 0 chr10 90900216 90900512 -49416253 + AluSx SINE Alu 1 306 -6 7184 185 70 65 chr10 90900512 90901688 -49415077 + MER57A-int LTR ERV1 2432 3601 -3718 270 0 0 0 chr10 90901688 90901718 -49415047 + (CA)n Simple_repeat Simple_repeat 2 31 0 7184 185 70 65 chr10 90901718 90901933 -49414832 + MER57A-int LTR ERV1 3601 5821 -1498 7635 163 18 25 chr10 90902258 90902969 -49413796 + MER57A-int LTR ERV1 5825 6523 -1014 2186 85 48 10 chr10 90902969 90903263 -49413502 + AluSx SINE Alu 1 305 -7 7635 163 18 25 chr10 90903263 90903883 -49412882 + MER57A-int LTR ERV1 6523 7146 -391 710 117 22 66 chr10 90903883 90904020 -49412745 + LTR54B LTR ERV1 3 133 -365 593 146 0 0 chr10 90904020 90904109 -49412656 + MER57A-int LTR ERV1 7281 7369 -168 839 161 15 0 chr10 90904114 90904244 -49412521 + AluJb SINE Alu 2 133 -179 758 188 0 14 chr10 90904247 90904385 -49412380 + MER57A-int LTR ERV1 7383 7518 -19 2239 156 25 25 chr10 90904386 90904483 -49412282 + MER57A LTR ERV1 1 97 -306 2587 119 22 14 chr10 90904483 90904524 -49412241 - THE1B LTR MaLR 0 364 325 2196 72 0 14 chr10 90904524 90904802 -49411963 + AluY SINE Alu 24 297 -14 2587 119 22 14 chr10 90904802 90905121 -49411644 - THE1B LTR MaLR -39 325 1 2239 156 25 25 chr10 90905121 90905426 -49411339 + MER57A LTR ERV1 96 403 0 419 250 87 0 chr10 90905475 90905579 -49411186 + MER81 DNA DNA 1 113 -1 4248 157 35 26 chr10 90906004 90906837 -49409928 + L1MB7 LINE L1 5336 6175 -9 2476 187 49 44 chr10 90907053 90907604 -49409161 - MLT2B3 LTR ERVL 0 554 1 22241 124 33 10 chr10 90907604 90910827 -49405938 - HERVL-B3 LTR ERVL 0 5654 2505 1801 111 25 0 chr10 90910827 90911071 -49405694 + AluSg SINE Alu 1 250 -60 22241 124 33 10 chr10 90911071 90911182 -49405583 - HERVL-B3 LTR ERVL -3149 2505 2398 5162 107 25 56 chr10 90911182 90911986 -49404779 - MER4E LTR ERV1 0 779 1 22241 124 33 10 chr10 90911986 90912936 -49403829 - HERVL-B3 LTR ERVL -3256 2398 36 2273 194 33 43 chr10 90913177 90913192 -49403573 - MLT2B3 LTR ERVL -39 508 494 489 34 0 0 chr10 90913192 90913251 -49403514 + (CA)n Simple_repeat Simple_repeat 2 60 0 2273 194 33 43 chr10 90913251 90913752 -49403013 - MLT2B3 LTR ERVL -53 494 1 25 31 0 0 chr10 90914307 90914339 -49402426 + AT_rich Low_complexity Low_complexity 1 32 0 858 206 96 0 chr10 90914473 90914672 -49402093 + MIR SINE MIR 3 220 -42 180 0 0 0 chr10 90915540 90915560 -49401205 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1421 185 45 70 chr10 90916010 90916324 -49400441 + AluJo SINE Alu 1 306 -6 289 241 86 43 chr10 90916712 90916828 -49399937 + MIR SINE MIR 47 167 -95 1602 228 97 42 chr10 90916846 90917003 -49399762 - MLT1F1 LTR MaLR -2 565 418 2993 83 8 0 chr10 90917003 90917364 -49399401 + THE1B LTR MaLR 1 364 0 1602 228 97 42 chr10 90917364 90917736 -49399029 - MLT1F1 LTR MaLR -149 418 1 1149 202 50 43 chr10 90917967 90918411 -49398354 - MER63D DNA MER1_type -438 623 114 1362 204 55 96 chr10 90918565 90919130 -49397635 - MER34 LTR ERV1 0 542 1 2360 98 0 0 chr10 90919864 90920161 -49396604 + AluSx SINE Alu 1 297 -15 936 221 43 29 chr10 90920248 90920456 -49396309 - MLT1E LTR MaLR -382 211 1 5595 188 40 58 chr10 90920456 90921447 -49395318 - L1MC4a LINE L1 -260 7548 6540 2560 93 51 20 chr10 90921447 90921800 -49394965 - THE1B LTR MaLR 0 364 1 5595 188 40 58 chr10 90921800 90921988 -49394777 - L1MC4a LINE L1 -1268 6540 6394 1704 190 0 3 chr10 90921988 90922316 -49394449 + AluJb SINE Alu 1 327 0 5595 188 40 58 chr10 90922316 90922488 -49394277 - L1MC4a LINE L1 -1414 6394 6220 21 0 0 0 chr10 90922488 90922509 -49394256 + AT_rich Low_complexity Low_complexity 1 21 0 2195 124 0 3 chr10 90922536 90922835 -49393930 - AluSx SINE Alu -14 298 1 29 28 0 0 chr10 90923032 90923068 -49393697 + AT_rich Low_complexity Low_complexity 1 36 0 4394 118 18 9 chr10 90923529 90924159 -49392606 + MER41B LTR ERV1 1 635 0 351 266 0 0 chr10 90924465 90924544 -49392221 + MER5A DNA MER1_type 104 182 -7 231 217 0 133 chr10 90924613 90924696 -49392069 + MER5B DNA MER1_type 102 173 -5 771 206 16 57 chr10 90924890 90925084 -49391681 + MER5A DNA MER1_type 1 186 -3 298 203 0 76 chr10 90925097 90925176 -49391589 - MER5B DNA MER1_type -37 141 69 28 0 0 0 chr10 90925679 90925707 -49391058 + AT_rich Low_complexity Low_complexity 1 28 0 2231 90 27 10 chr10 90926222 90926523 -49390242 + AluSq SINE Alu 1 306 -7 2167 117 0 0 chr10 90927202 90927493 -49389272 + AluSg SINE Alu 1 291 -19 2141 117 0 32 chr10 90927873 90928189 -49388576 - AluSx SINE Alu -6 306 1 1251 0 0 0 chr10 90928196 90928331 -49388434 - AluYa5/8 SINE Alu -5 306 172 201 261 8 134 chr10 90928331 90928450 -49388315 + L2 LINE L2 2994 3097 -175 238 337 47 12 chr10 90929113 90929199 -49387566 + L2 LINE L2 3137 3225 -47 423 235 53 96 chr10 90930206 90930393 -49386372 + MIR3 SINE MIR 23 201 -7 2273 110 3 0 chr10 90930501 90930801 -49385964 - AluSq SINE Alu -12 301 1 252 293 157 14 chr10 90931821 90931961 -49384804 + MIR SINE MIR 15 174 -88 297 128 0 0 chr10 90932498 90932545 -49384220 + (CTG)n Simple_repeat Simple_repeat 3 49 0 230 81 27 0 chr10 90933396 90933433 -49383332 + L1MA9 LINE L1 6275 6312 0 185 219 0 0 chr10 90933654 90933686 -49383079 + L2 LINE L2 3270 3301 -12 261 211 39 0 chr10 90934813 90934865 -49381900 - L2 LINE L2 -14 3299 3246 1246 104 6 27 chr10 90935470 90935653 -49381112 - AluSg/x SINE Alu -2 308 130 2344 102 0 0 chr10 90935713 90936018 -49380747 - AluSx SINE Alu -7 305 1 381 304 52 0 chr10 90936284 90936419 -49380346 + MIR SINE MIR 105 246 -16 1447 172 0 55 chr10 90936555 90936828 -49379937 - AluJo SINE Alu -54 258 1 314 162 88 29 chr10 90937492 90937560 -49379205 + L2 LINE L2 3242 3313 0 504 363 23 35 chr10 90937643 90937822 -49378943 - L1MEd LINE L1 -5396 723 543 2495 64 0 0 chr10 90937822 90938117 -49378648 - AluY SINE Alu -16 295 1 504 363 23 35 chr10 90938117 90938334 -49378431 - L1MEd LINE L1 -5576 543 332 2152 123 0 3 chr10 90938565 90938866 -49377899 - AluSx SINE Alu -8 304 5 1913 145 13 16 chr10 90939778 90940089 -49376676 + AluJb SINE Alu 1 310 -2 297 0 0 0 chr10 90941265 90941298 -49375467 + (TG)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr10 90943183 90943208 -49373557 + (CA)n Simple_repeat Simple_repeat 1 25 0 506 272 63 6 chr10 90943599 90943757 -49373008 - MIR SINE MIR -37 225 59 933 228 43 21 chr10 90945351 90945584 -49371181 + MER58 DNA MER1_type 1 238 -2182 823 134 8 8 chr10 90945928 90946062 -49370703 - FLAM_C SINE Alu -4 139 6 345 109 0 0 chr10 90946155 90946210 -49370555 + (TG)n Simple_repeat Simple_repeat 2 56 0 225 0 0 0 chr10 90946296 90946321 -49370444 + (T)n Simple_repeat Simple_repeat 1 25 0 1471 166 81 127 chr10 90946711 90946779 -49369986 + Charlie4a DNA MER1_type 1 71 -1890 2151 113 0 3 chr10 90946779 90947071 -49369694 - AluSx SINE Alu -20 292 2 1471 166 81 127 chr10 90947071 90947531 -49369234 + Charlie4a DNA MER1_type 71 505 -3 408 265 44 22 chr10 90948327 90948463 -49368302 - MER5B DNA MER1_type -35 143 5 213 39 0 0 chr10 90948574 90948600 -49368165 + (T)n Simple_repeat Simple_repeat 1 26 0 1114 157 0 6 chr10 90949331 90949509 -49367256 + FRAM SINE Alu 1 176 0 2191 132 0 0 chr10 90949517 90949821 -49366944 + AluSx SINE Alu 1 304 -8 6165 153 23 3 chr10 90950730 90952185 -49364580 + L1MA4A LINE L1 4821 6297 -6 286 237 62 0 chr10 90952236 90952333 -49364432 + L1M4 LINE L1 5191 5293 -853 1955 153 7 10 chr10 90952349 90952649 -49364116 + AluJb SINE Alu 1 299 -13 1060 204 92 107 chr10 90953192 90953585 -49363180 - L1ME3A LINE L1 0 6170 5784 916 178 124 50 chr10 90953594 90953796 -49362969 + MER20 DNA MER1_type 3 219 0 2467 174 28 4 chr10 90954131 90954597 -49362168 - L1MB7 LINE L1 0 6184 5708 243 146 0 0 chr10 90955644 90955685 -49361080 + (T)n Simple_repeat Simple_repeat 1 41 0 2076 116 0 61 chr10 90955687 90956016 -49360749 - AluSx SINE Alu -3 309 1 1850 166 0 17 chr10 90956298 90956600 -49360165 - AluJo SINE Alu -15 297 1 850 222 113 14 chr10 90957104 90957337 -49359428 - L1ME3A LINE L1 -200 5970 5715 380 277 7 46 chr10 90957337 90957499 -49359266 - MIR SINE MIR -65 143 13 1628 187 28 7 chr10 90958013 90958297 -49358468 + AluJo SINE Alu 1 290 -22 521 156 33 0 chr10 90959540 90959630 -49357135 - MER53 DNA DNA -1 188 96 * 566 172 0 0 chr10 90959551 90959644 -49357121 + MER53 DNA DNA 23 115 -74 360 290 10 0 chr10 90959772 90959872 -49356893 + L2 LINE L2 3172 3272 0 1851 103 197 9 chr10 90960082 90960422 -49356343 + L1MA6 LINE L1 5893 6296 -4 23 0 0 0 chr10 90960914 90960937 -49355828 + AT_rich Low_complexity Low_complexity 1 23 0 2153 82 10 3 chr10 90961037 90961361 -49355404 - AluY SINE Alu 0 311 2 2324 101 3 0 chr10 90961664 90961970 -49354795 + AluSp SINE Alu 1 307 -6 2369 74 19 7 chr10 90961994 90962303 -49354462 + AluSp SINE Alu 1 313 0 1707 267 107 38 chr10 90962317 90963183 -49353582 + L1MC4a LINE L1 5264 6189 -1619 720 268 84 25 chr10 90963337 90963576 -49353189 - MIR SINE MIR -8 254 2 294 274 24 24 chr10 90964117 90964241 -49352524 + MER5A DNA MER1_type 60 183 -6 810 153 102 32 chr10 90964406 90964563 -49352202 + AluJb SINE Alu 129 296 -16 386 297 173 43 chr10 90964730 90965174 -49351591 - L2 LINE L2 -835 2479 1978 258 186 0 0 chr10 90965538 90965581 -49351184 - MIR SINE MIR -38 224 182 199 240 0 20 chr10 90966646 90966696 -49350069 - L2 LINE L2 -2 3311 3263 * 217 301 227 43 chr10 90966686 90966849 -49349916 - MIR SINE MIR -47 215 23 244 310 130 34 chr10 90967235 90967474 -49349291 - L2 LINE L2 -465 2849 2588 1586 164 95 43 chr10 90967692 90968039 -49348726 - MLT1A1 LTR MaLR 0 365 1 2057 138 78 15 chr10 90969426 90969824 -49346941 - L1MC3 LINE L1 0 7785 7363 805 183 0 15 chr10 90971351 90971488 -49345277 + FLAM_A SINE Alu 7 141 -1 793 213 56 6 chr10 90971904 90972064 -49344701 - AluJo SINE Alu -23 289 122 1826 112 0 0 chr10 90972177 90972418 -49344347 + AluSc SINE Alu 3 243 -66 26 0 0 0 chr10 90972478 90972504 -49344261 + AT_rich Low_complexity Low_complexity 1 26 0 315 219 160 8 chr10 90972709 90972828 -49343937 - L1ME LINE L1 -326 5795 5659 1641 176 23 26 chr10 90972982 90973288 -49343477 + AluJb SINE Alu 3 307 -5 28 29 0 0 chr10 90973512 90973547 -49343218 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr10 90973747 90973775 -49342990 + AT_rich Low_complexity Low_complexity 1 28 0 1608 207 0 10 chr10 90973834 90974318 -49342447 - AluJo SINE Alu 0 312 1 255 251 102 60 chr10 90974869 90975036 -49341729 + MIR SINE MIR 36 209 -53 366 23 0 0 chr10 90975868 90975911 -49340854 + (TG)n Simple_repeat Simple_repeat 2 44 0 647 282 33 19 chr10 90976091 90976304 -49340461 - MIR SINE MIR -25 237 22 2110 153 0 0 chr10 90977228 90977536 -49339229 - AluSx SINE Alu -4 308 1 1831 216 153 52 chr10 90977584 90978316 -49338449 - L1ME2 LINE L1 -14 6150 5304 2406 93 0 0 chr10 90978316 90978626 -49338139 - AluSg SINE Alu 0 310 1 1831 216 153 52 chr10 90978626 90978664 -49338101 - L1ME2 LINE L1 -860 5304 5271 297 0 0 0 chr10 90978679 90978701 -49338064 + (TG)n Simple_repeat Simple_repeat 1 55 0 297 0 0 0 chr10 90978701 90978734 -49338031 + (TG)n Simple_repeat Simple_repeat 2 34 0 376 233 58 19 chr10 90978805 90978908 -49337857 + L2 LINE L2 3207 3313 0 1503 207 0 7 chr10 90979067 90979372 -49337393 + AluJb SINE Alu 1 303 0 2140 121 23 10 chr10 90980150 90980457 -49336308 - AluJo SINE Alu 0 312 2 23 0 0 0 chr10 90981468 90981491 -49335274 + AT_rich Low_complexity Low_complexity 1 23 0 210 312 11 32 chr10 90982129 90982222 -49334543 + MIR3 SINE MIR 111 201 -7 209 154 231 0 chr10 90982541 90982580 -49334185 - MIR SINE MIR -129 79 32 2102 126 3 7 chr10 90983311 90983613 -49333152 + AluSx SINE Alu 1 301 -11 756 275 30 17 chr10 90983687 90983928 -49332837 + MIR SINE MIR 11 251 -11 354 276 8 37 chr10 90984917 90985051 -49331714 - Charlie8 DNA MER1_type -2174 243 114 1885 139 0 27 chr10 90985051 90985352 -49331413 - AluJb SINE Alu -19 293 1 24 53 0 0 chr10 90985557 90985595 -49331170 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 90985905 90985927 -49330838 + (A)n Simple_repeat Simple_repeat 1 22 0 515 231 76 58 chr10 90989465 90989690 -49327075 - MIR SINE MIR -32 230 2 1373 177 9 95 chr10 90990143 90990460 -49326305 - AluJo SINE Alu -2 310 21 2146 114 43 3 chr10 90990624 90990923 -49325842 - AluSx SINE Alu -1 311 1 616 250 175 35 chr10 90991807 90992035 -49324730 + MIR SINE MIR 2 261 -1 739 194 8 0 chr10 90992069 90992193 -49324572 + FLAM_A SINE Alu 1 125 -8 267 250 26 13 chr10 90992293 90992369 -49324396 - L2 LINE L2 -11 3261 3185 2096 127 0 0 chr10 90992455 90992778 -49323987 - AluSx SINE Alu 0 312 1 275 302 259 11 chr10 90993668 90993857 -49322908 - MIR SINE MIR -4 258 23 23 0 0 0 chr10 90994077 90994100 -49322665 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 90994389 90994420 -49322345 + AT_rich Low_complexity Low_complexity 1 31 0 259 271 200 29 chr10 90995952 90996092 -49320673 - MIR SINE MIR -51 211 48 323 85 21 0 chr10 90997063 90997110 -49319655 - MLT2D LTR ERVL 0 520 473 219 227 23 0 chr10 90997119 90997247 -49319518 + (TA)n Simple_repeat Simple_repeat 1 131 0 26 0 0 0 chr10 90997247 90997273 -49319492 + AT_rich Low_complexity Low_complexity 1 26 0 313 221 50 7 chr10 90997288 90997428 -49319337 + (TA)n Simple_repeat Simple_repeat 1 146 0 240 35 0 0 chr10 90997444 90997473 -49319292 + (CA)n Simple_repeat Simple_repeat 2 30 0 2058 161 52 3 chr10 90997478 90997827 -49318938 - MLT2D LTR ERVL -48 366 1 1785 158 0 57 chr10 90998290 90998477 -49318288 - AluJo SINE Alu -14 298 135 279 0 0 0 chr10 90998477 90998508 -49318257 + (CA)n Simple_repeat Simple_repeat 2 32 0 1785 158 0 57 chr10 90998508 90998636 -49318129 - AluJo SINE Alu -177 135 1 1693 82 78 19 chr10 90998664 90998742 -49318023 + L1MA3 LINE L1 6034 6106 -199 2135 104 0 0 chr10 90998742 90999048 -49317717 + AluSc SINE Alu 1 306 0 1693 82 78 19 chr10 90999048 90999224 -49317541 + L1MA3 LINE L1 6106 6305 0 294 230 20 110 chr10 91000991 91001050 -49315715 + MIR3 SINE MIR 92 140 -68 2121 113 10 0 chr10 91001050 91001343 -49315422 + AluSx SINE Alu 1 296 -16 294 230 20 110 chr10 91001343 91001383 -49315382 + MIR3 SINE MIR 140 182 -26 38 22 0 0 chr10 91001540 91001585 -49315180 + AT_rich Low_complexity Low_complexity 1 45 0 4064 136 36 31 chr10 91001766 91002309 -49314456 + Tigger1 DNA MER2_type 1 549 -1869 2221 107 10 0 chr10 91002309 91002608 -49314157 + AluSp SINE Alu 3 304 -9 4064 136 36 31 chr10 91002608 91002727 -49314038 + Tigger1 DNA MER2_type 549 666 -1752 876 123 58 13 chr10 91002727 91002882 -49313883 - LTR49 LTR ERV1 0 595 434 650 246 12 36 chr10 91003103 91003270 -49313495 - MER5B DNA MER1_type -15 163 1 333 319 144 22 chr10 91003305 91003575 -49313190 + L2 LINE L2 2306 2608 -706 316 325 56 12 chr10 91004002 91004162 -49312603 + MIR3 SINE MIR 41 207 -1 417 39 0 0 chr10 91004187 91004238 -49312527 + (TA)n Simple_repeat Simple_repeat 2 52 0 1131 213 43 5 chr10 91005162 91005373 -49311392 - MER20 DNA MER1_type 0 219 1 2397 107 0 0 chr10 91005779 91006089 -49310676 - AluSg SINE Alu 0 310 1 1906 300 67 10 chr10 91006129 91006742 -49310023 - MER115 DNA AcHobo -2 691 44 4713 150 40 57 chr10 91006905 91007063 -49309702 - L1MB3 LINE L1 -7 6176 6017 1532 161 56 14 chr10 91007063 91007348 -49309417 + AluJo SINE Alu 1 297 -15 4713 150 40 57 chr10 91007348 91007929 -49308836 - L1MB3 LINE L1 -166 6017 5428 294 29 0 0 chr10 91007929 91007964 -49308801 + (TG)n Simple_repeat Simple_repeat 2 36 0 1708 141 27 4 chr10 91007964 91008226 -49308539 - AluJb SINE Alu -44 268 1 4713 150 40 57 chr10 91008226 91008836 -49307929 - L1MB3 LINE L1 -753 5430 4850 3833 203 40 45 chr10 91009102 91010004 -49306761 + Charlie1a DNA MER1_type 1 897 -558 3145 176 37 17 chr10 91009982 91010628 -49306137 + Charlie1 DNA MER1_type 2103 2761 0 * 2264 116 0 0 chr10 91010917 91011218 -49305547 - AluSx SINE Alu -11 301 1 1887 134 7 24 chr10 91011286 91011584 -49305181 - AluJo SINE Alu -19 293 1 2094 116 17 0 chr10 91012568 91012861 -49303904 + AluSx SINE Alu 1 298 -14 2351 88 3 0 chr10 91013425 91013719 -49303046 + AluSg SINE Alu 1 295 -15 194 361 65 19 chr10 91014937 91015045 -49301720 + L2 LINE L2 3145 3257 -15 205 182 0 0 chr10 91015719 91015752 -49301013 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 255 266 0 0 chr10 91016452 91016516 -49300249 - MIR3 SINE MIR -23 185 122 201 220 68 17 chr10 91016590 91016649 -49300116 - MIR SINE MIR -130 78 17 2164 114 17 0 chr10 91017447 91017744 -49299021 - AluSg SINE Alu -8 302 1 1372 141 111 67 chr10 91017744 91017846 -49298919 - AluSx SINE Alu -2 310 214 3628 92 17 6 chr10 91017846 91018326 -49298439 + L1PA8A LINE L1 5633 6117 -14 1372 141 111 67 chr10 91018326 91018520 -49298245 - AluSx SINE Alu -98 214 1 186 71 0 0 chr10 91018650 91018678 -49298087 + (T)n Simple_repeat Simple_repeat 1 28 0 725 211 92 79 chr10 91019422 91019726 -49297039 + LTR49 LTR ERV1 5 312 -283 300 271 50 29 chr10 91019739 91019879 -49296886 + HERVL LTR ERVL 3406 3548 -2106 298 208 208 9 chr10 91020286 91020392 -49296373 + LTR67 LTR ERVL 429 555 -2 746 180 93 0 chr10 91020626 91020765 -49296000 - AluJb SINE Alu -9 303 152 607 259 205 0 chr10 91022012 91022217 -49294548 - MIR SINE MIR -4 258 12 23 68 0 0 chr10 91023223 91023267 -49293498 + AT_rich Low_complexity Low_complexity 1 44 0 180 179 0 0 chr10 91023898 91023937 -49292828 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 91025037 91025058 -49291707 + AT_rich Low_complexity Low_complexity 1 21 0 2141 89 28 0 chr10 91025229 91025520 -49291245 + AluSq SINE Alu 1 299 -14 338 280 275 11 chr10 91027096 91027285 -49289480 - MIR SINE MIR -4 258 20 350 276 87 73 chr10 91027821 91028107 -49288658 + L1MC4a LINE L1 2156 2445 -3981 299 316 115 8 chr10 91028219 91028472 -49288293 + L1MC4a LINE L1 2532 2811 -3615 267 242 67 30 chr10 91028564 91028729 -49288036 - L1M4 LINE L1 -874 5272 5102 600 217 111 17 chr10 91029320 91029500 -49287265 + MIR SINE MIR 63 259 -3 746 139 134 76 chr10 91029879 91029911 -49286854 + AluJo SINE Alu 78 107 -205 2055 128 131 13 chr10 91029911 91030294 -49286471 + MSTA LTR MaLR 1 428 0 746 139 134 76 chr10 91030294 91030433 -49286332 + AluJo SINE Alu 107 259 -53 1757 141 28 7 chr10 91031108 91031392 -49285373 + AluJb SINE Alu 2 291 -21 1389 195 89 7 chr10 91031489 91031771 -49284994 - AluJo SINE Alu -6 306 2 2034 105 0 11 chr10 91032196 91032472 -49284293 - AluSq SINE Alu -17 296 24 1892 87 0 45 chr10 91032518 91032783 -49283982 + AluSg SINE Alu 3 255 -55 845 204 30 12 chr10 91032896 91033063 -49283702 + AluJo SINE Alu 120 289 -23 301 260 148 59 chr10 91033288 91033566 -49283199 + L1MC4a LINE L1 4880 5205 -1221 1848 156 0 7 chr10 91033566 91033874 -49282891 + AluSx SINE Alu 1 306 -6 301 260 148 59 chr10 91033874 91033987 -49282778 + L1MC4a LINE L1 5205 5306 -1120 615 229 133 78 chr10 91034076 91034566 -49282199 + L1MC5 LINE L1 7313 7829 -132 1569 256 101 59 chr10 91034900 91035138 -49281627 + L1MC4a LINE L1 5467 5694 -740 1521 177 22 47 chr10 91035138 91035455 -49281310 + AluJo SINE Alu 3 311 -1 1569 256 101 59 chr10 91035455 91035949 -49280816 + L1MC4a LINE L1 5694 6098 -336 1473 107 0 103 chr10 91035954 91036226 -49280539 + AluSg/x SINE Alu 66 309 -3 1513 168 84 37 chr10 91036640 91036962 -49279803 - MER1B DNA MER1_type 0 337 1 26 0 0 0 chr10 91037139 91037165 -49279600 + AT_rich Low_complexity Low_complexity 1 26 0 300 267 128 0 chr10 91037299 91037385 -49279380 + L2 LINE L2 3176 3272 0 1436 191 44 10 chr10 91038190 91038484 -49278281 + AluJo SINE Alu 1 304 -8 214 337 152 51 chr10 91038653 91039048 -49277717 + L2 LINE L2 2825 3259 -13 2032 113 24 0 chr10 91039055 91039346 -49277419 + AluSx SINE Alu 1 298 -14 212 83 0 28 chr10 91041580 91041616 -49275149 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1036 190 0 0 chr10 91041626 91041800 -49274965 - AluJo SINE Alu -138 174 1 21 36 0 0 chr10 91041823 91041851 -49274914 + AT_rich Low_complexity Low_complexity 1 28 0 296 140 0 0 chr10 91042355 91042405 -49274360 - L1PA12 LINE L1 -269 5899 5850 1158 51 6 6 chr10 91042406 91042562 -49274203 + L1PA13 LINE L1 6006 6161 -2 374 250 43 79 chr10 91043664 91043828 -49272937 - MIR SINE MIR -61 201 44 434 254 127 33 chr10 91043878 91044055 -49272710 + L1MC2 LINE L1 895 1109 -5010 1753 158 3 20 chr10 91044055 91044359 -49272406 + AluJb SINE Alu 1 299 -13 434 254 127 33 chr10 91044359 91044456 -49272309 + L1MC2 LINE L1 1109 1195 -4924 2316 113 0 0 chr10 91044526 91044836 -49271929 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 91044899 91044921 -49271844 + AT_rich Low_complexity Low_complexity 1 22 0 248 247 74 0 chr10 91044995 91045076 -49271689 + L1MEd LINE L1 91 177 -5942 1898 148 7 10 chr10 91045866 91046157 -49270608 - AluJb SINE Alu -22 290 1 766 136 14 27 chr10 91046186 91046333 -49270432 + L1MA5A LINE L1 6151 6295 -2 388 223 136 64 chr10 91046671 91046922 -49269843 + L1ME4a LINE L1 5841 6109 -12 198 0 0 0 chr10 91047566 91047588 -49269177 + (A)n Simple_repeat Simple_repeat 1 22 0 406 179 48 0 chr10 91047590 91047674 -49269091 + AluSq/x SINE Alu 48 135 -167 303 196 82 21 chr10 91047683 91047757 -49269008 + L1MC2 LINE L1 2199 2282 -3847 2047 148 28 22 chr10 91047757 91048116 -49268649 - MER46B DNA MER2_type 0 236 1 303 196 82 21 chr10 91048116 91048138 -49268627 + L1MC2 LINE L1 2282 2301 -3828 1287 198 56 54 chr10 91048179 91048435 -49268330 + L1MC2 LINE L1 4890 5144 -985 1933 101 4 8 chr10 91048435 91048692 -49268073 + AluSq SINE Alu 34 289 -24 263 28 28 0 chr10 91048695 91048731 -49268034 + (TAAAA)n Simple_repeat Simple_repeat 5 41 0 1287 198 56 54 chr10 91048731 91048879 -49267886 + L1MC2 LINE L1 5145 5299 -830 608 115 221 0 chr10 91048881 91049003 -49267762 + L1MA5 LINE L1 6152 6300 0 * 4275 171 88 20 chr10 91049001 91049995 -49266770 + L1MC2 LINE L1 5266 6327 0 438 316 132 43 chr10 91050195 91050613 -49266152 + L1MEd LINE L1 330 784 -5335 1046 162 6 17 chr10 91050730 91050903 -49265862 - AluJo SINE Alu -141 171 1 377 298 208 30 chr10 91050952 91051352 -49265413 + L1MEd LINE L1 1215 1685 -4625 1552 159 45 4 chr10 91051696 91051960 -49264805 + AluJb SINE Alu 24 298 -14 1626 174 34 7 chr10 91052056 91052354 -49264411 + AluJb SINE Alu 1 306 -6 247 186 0 0 chr10 91052731 91052774 -49263991 + L1 LINE L1 4939 4981 -1165 320 326 99 16 chr10 91053059 91053301 -49263464 + L1ME LINE L1 5550 5811 -359 48 32 0 0 chr10 91054313 91054375 -49262390 + AT_rich Low_complexity Low_complexity 1 62 0 25 31 0 0 chr10 91054602 91054634 -49262131 + AT_rich Low_complexity Low_complexity 1 32 0 2028 106 3 0 chr10 91055644 91055927 -49260838 + AluY SINE Alu 12 295 -16 1418 186 48 3 chr10 91056300 91056591 -49260174 + AluJo SINE Alu 5 308 -4 21 0 0 0 chr10 91056801 91056822 -49259943 + AT_rich Low_complexity Low_complexity 1 21 0 1741 192 0 3 chr10 91058397 91058710 -49258055 + AluJb SINE Alu 1 312 0 216 0 0 0 chr10 91058941 91058965 -49257800 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2074 98 3 66 chr10 91059863 91060181 -49256584 + AluSx SINE Alu 3 300 -12 442 237 112 40 chr10 91060698 91060894 -49255871 - MIR SINE MIR -13 249 51 2823 175 52 6 chr10 91061020 91061556 -49255209 + MER68 LTR ERV1 2 562 0 571 326 65 8 chr10 91062356 91062601 -49254164 - MIR SINE MIR -1 261 3 1500 169 28 0 chr10 91062929 91063183 -49253582 + AluJo SINE Alu 29 289 -23 931 182 23 36 chr10 91063452 91063659 -49253106 + MER20 DNA MER1_type 14 219 0 493 318 85 22 chr10 91063940 91064163 -49252602 - MIR SINE MIR -14 248 12 651 111 0 10 chr10 91065193 91065292 -49251473 + MER4A LTR ERV1 1 98 -566 1782 130 5 54 chr10 91065292 91065655 -49251110 + MER4A LTR ERV1 261 664 0 2675 113 228 24 chr10 91065658 91066301 -49250464 + MER4A-int LTR ERV1 1 840 -5758 1253 251 45 17 chr10 91066345 91066714 -49250051 + MER4A-int LTR ERV1 1845 3064 -4171 * 4296 113 35 11 chr10 91066702 91067582 -49249183 + MER4A-int LTR ERV1 189 1144 -5614 270 0 0 0 chr10 91067584 91067614 -49249151 + (TG)n Simple_repeat Simple_repeat 2 31 0 5003 100 211 157 chr10 91067617 91069449 -49247316 + MER4A-int LTR ERV1 1748 3678 -2920 11852 97 58 44 chr10 91069450 91071482 -49245283 + MER4A-int LTR ERV1 3837 5896 -702 526 182 212 0 chr10 91071483 91071615 -49245150 + AluSg/x SINE Alu 137 296 -16 4159 103 51 17 chr10 91071615 91072303 -49244462 + MER4A-int LTR ERV1 5888 6598 0 601 96 53 11 chr10 91072304 91072398 -49244367 + MER4A LTR ERV1 1 98 -566 1791 141 20 44 chr10 91072398 91072752 -49244013 + MER4A LTR ERV1 261 664 0 2051 140 0 0 chr10 91073342 91073628 -49243137 - AluSx SINE Alu -26 286 1 251 207 52 0 chr10 91075507 91075565 -49241200 - L1ME2 LINE L1 -213 5951 5891 1858 204 115 8 chr10 91075651 91076156 -49240609 + MER34B LTR ERV1 7 565 0 1269 269 85 7 chr10 91076181 91076639 -49240126 - L1ME2 LINE L1 -414 5748 5255 398 221 106 18 chr10 91076678 91076791 -49239974 - MIR SINE MIR -40 222 100 543 272 140 15 chr10 91076919 91077261 -49239504 - L1ME2 LINE L1 -1672 4474 4090 618 115 0 0 chr10 91077420 91077540 -49239225 + AluSg/x SINE Alu 192 311 0 1189 277 92 28 chr10 91077551 91078129 -49238636 - L1ME2 LINE L1 -2168 3978 3364 1501 166 218 25 chr10 91078130 91078562 -49238203 - Tigger2 DNA MER2_type 0 2718 2 1980 110 40 0 chr10 91078583 91078904 -49237861 - AluSq SINE Alu 0 332 1 302 220 95 18 chr10 91078935 91079103 -49237662 - L1ME2 LINE L1 -2845 3301 3121 308 344 80 24 chr10 91079131 91079343 -49237422 - L1ME2 LINE L1 -3283 2863 2640 512 277 125 11 chr10 91079345 91079720 -49237045 - L1ME2 LINE L1 -3528 2618 2201 1953 144 0 0 chr10 91080009 91080320 -49236445 + AluSx SINE Alu 1 311 0 198 355 123 49 chr10 91080723 91081114 -49235651 + L2 LINE L2 2241 2660 -654 1915 95 57 4 chr10 91081230 91081513 -49235252 - AluSx SINE Alu 0 305 9 187 283 0 0 chr10 91082606 91082652 -49234113 + L2 LINE L2 3264 3309 -4 417 297 35 28 chr10 91083057 91083202 -49233563 + MIR3 SINE MIR 40 185 -23 194 366 89 0 chr10 91087291 91087403 -49229362 - L2 LINE L2 -1 3271 3150 1671 122 24 84 chr10 91089998 91090294 -49226471 + AluJb SINE Alu 7 284 -28 293 319 39 44 chr10 91090406 91090588 -49226177 - MIR SINE MIR -46 216 36 180 0 0 0 chr10 91090944 91090964 -49225801 + (CAA)n Simple_repeat Simple_repeat 2 21 0 263 277 178 59 chr10 91091251 91091352 -49225413 + MER81 DNA DNA 2 114 0 23 33 0 0 chr10 91091785 91091815 -49224950 + AT_rich Low_complexity Low_complexity 1 30 0 2313 94 0 14 chr10 91092093 91092390 -49224375 + AluSx SINE Alu 1 293 -19 373 336 8 8 chr10 91092396 91092518 -49224247 - MER5A DNA MER1_type -5 184 63 648 147 49 15 chr10 91092538 91092679 -49224086 + MLT1A2 LTR MaLR 186 427 -40 22 0 0 0 chr10 91093115 91093137 -49223628 + AT_rich Low_complexity Low_complexity 1 22 0 3521 94 6 10 chr10 91093273 91093783 -49222982 + L1MA3 LINE L1 5789 6296 -9 221 214 57 0 chr10 91093791 91093861 -49222904 + A-rich Low_complexity Low_complexity 2 75 0 856 268 38 13 chr10 91095214 91095453 -49221312 + MIR SINE MIR 11 255 -7 2551 60 0 0 chr10 91096156 91096456 -49220309 - AluY SINE Alu -11 300 1 980 167 0 18 chr10 91096548 91096716 -49220049 - FRAM SINE Alu -14 162 1 26 0 0 0 chr10 91098056 91098082 -49218683 + AT_rich Low_complexity Low_complexity 1 26 0 12895 108 30 32 chr10 91098209 91098823 -49217942 + Tigger1 DNA MER2_type 1 615 -1803 1595 188 3 21 chr10 91098823 91099110 -49217655 - AluJo SINE Alu -30 282 1 12895 108 30 32 chr10 91099110 91100074 -49216691 + Tigger1 DNA MER2_type 615 1577 -841 2113 92 4 7 chr10 91100074 91100401 -49216364 - AluSc SINE Alu 0 326 1 12895 108 30 32 chr10 91100401 91100875 -49215890 + Tigger1 DNA MER2_type 1577 2051 -367 189 319 0 0 chr10 91101759 91101806 -49214959 - L3 LINE CR1 -5 1572 1526 576 308 60 1 chr10 91101816 91102021 -49214744 + MIR SINE MIR 3 219 -43 442 339 48 5 chr10 91102075 91102261 -49214504 - L3 LINE CR1 -96 1481 1288 210 294 141 54 chr10 91102323 91102507 -49214258 - L3 LINE CR1 -563 1014 815 1022 235 73 4 chr10 91102650 91102884 -49213881 - MIR SINE MIR -5 257 8 676 127 68 0 chr10 91102922 91103040 -49213725 - AluJb SINE Alu -11 301 176 1235 168 0 19 chr10 91103047 91103256 -49213509 + AluJo SINE Alu 93 297 -15 7056 206 83 63 chr10 91103265 91103651 -49213114 - L1MDb LINE L1 -1293 5247 4870 1623 177 7 3 chr10 91103651 91103934 -49212831 - 7SLRNA srpRNA srpRNA -7 313 30 7056 206 83 63 chr10 91103934 91104566 -49212199 - L1MDb LINE L1 -1670 4870 4252 1998 125 47 0 chr10 91104566 91104863 -49211902 - AluSx SINE Alu -1 311 1 7056 206 83 63 chr10 91104863 91106441 -49210324 - L1MDb LINE L1 -2288 4252 2636 724 191 40 17 chr10 91107030 91107203 -49209562 - AluSq SINE Alu -136 177 1 21 57 0 0 chr10 91107252 91107287 -49209478 + AT_rich Low_complexity Low_complexity 1 35 0 213 305 12 12 chr10 91107652 91107734 -49209031 - MIR3 SINE MIR -6 202 121 1626 168 0 11 chr10 91107741 91108003 -49208762 + AluJb SINE Alu 1 259 -53 936 282 89 58 chr10 91108272 91108665 -49208100 - MLT1K LTR MaLR -10 578 174 388 279 106 31 chr10 91109567 91109793 -49206972 + L1M4 LINE L1 2266 2508 -3638 6030 143 87 5 chr10 91109860 91110965 -49205800 + Tigger3b DNA MER2_type 1 1196 -35 22 56 0 0 chr10 91111005 91111041 -49205724 + AT_rich Low_complexity Low_complexity 1 36 0 23 86 0 0 chr10 91111159 91111217 -49205548 + AT_rich Low_complexity Low_complexity 1 58 0 419 233 42 8 chr10 91112533 91112653 -49204112 + MIR SINE MIR 127 250 -12 22 0 0 0 chr10 91113658 91113680 -49203085 + AT_rich Low_complexity Low_complexity 1 22 0 1109 171 95 8 chr10 91113767 91113884 -49202881 + AluSx SINE Alu 1 106 -206 219 69 0 0 chr10 91113884 91113913 -49202852 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1109 171 95 8 chr10 91113913 91114047 -49202718 + AluSx SINE Alu 106 274 -38 911 92 46 7 chr10 91114781 91114934 -49201831 - Tigger2 DNA MER2_type -99 2619 2461 3691 147 42 39 chr10 91114991 91115184 -49201581 - Tigger2 DNA MER2_type -1965 753 562 2301 107 0 0 chr10 91115184 91115494 -49201271 + AluSg SINE Alu 1 310 0 3691 147 42 39 chr10 91115494 91116014 -49200751 - Tigger2 DNA MER2_type -2156 562 38 727 261 102 10 chr10 91116177 91116560 -49200205 - L1MDb LINE L1 -4044 2496 2079 772 178 65 30 chr10 91116562 91116754 -49200011 - FRAM SINE Alu 0 40 1 3142 227 90 18 chr10 91116754 91117855 -49198910 - L1MDb LINE L1 -4474 2066 934 355 374 37 26 chr10 91118447 91118717 -49198048 - L1MDb LINE L1 -6212 328 56 502 119 0 3 chr10 91118719 91118963 -49197802 + AluSx SINE Alu 1 307 -3 1759 214 13 11 chr10 91119028 91119211 -49197554 + MLT1A2 LTR MaLR 1 182 -192 216 0 0 0 chr10 91119211 91119235 -49197530 + (TC)n Simple_repeat Simple_repeat 1 24 0 1759 214 13 11 chr10 91119235 91119424 -49197341 + MLT1A2 LTR MaLR 182 374 0 1868 166 7 10 chr10 91120677 91120979 -49195786 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr10 91122015 91122036 -49194729 + AT_rich Low_complexity Low_complexity 1 21 0 208 316 0 95 chr10 91122149 91122244 -49194521 - L2 LINE L2 -20 3293 3208 990 210 44 48 chr10 91122249 91122308 -49194457 - MIR SINE MIR 0 262 204 360 0 0 0 chr10 91122308 91122348 -49194417 + (CA)n Simple_repeat Simple_repeat 2 41 0 990 210 44 48 chr10 91122348 91122382 -49194383 - MIR SINE MIR -58 204 171 2210 127 0 10 chr10 91122382 91122690 -49194075 + AluSx SINE Alu 1 305 -7 990 210 44 48 chr10 91122690 91122843 -49193922 - MIR SINE MIR -91 171 16 1951 144 26 7 chr10 91122999 91123304 -49193461 + AluJb SINE Alu 1 311 -1 983 102 0 15 chr10 91123385 91123522 -49193243 + FLAM_C SINE Alu 9 143 0 23 54 0 0 chr10 91125235 91125272 -49191493 + AT_rich Low_complexity Low_complexity 1 37 0 2946 112 39 0 chr10 91125561 91126024 -49190741 - Tigger3b DNA MER2_type -1 1230 750 3345 130 46 13 chr10 91126074 91126688 -49190077 - Tigger3b DNA MER2_type -596 635 2 249 274 115 0 chr10 91127039 91127152 -49189613 - L1ME LINE L1 -311 5810 5685 1586 214 148 29 chr10 91127186 91127329 -49189436 - Charlie2 DNA MER1_type -1 2861 2736 2146 67 0 119 chr10 91127329 91127672 -49189093 - AluSq SINE Alu -11 302 1 1586 214 148 29 chr10 91127672 91128399 -49188366 - Charlie2 DNA MER1_type -126 2736 1887 636 228 65 49 chr10 91128425 91128671 -49188094 - Charlie2 DNA MER1_type -2538 324 75 2052 131 38 0 chr10 91129988 91130279 -49186486 + AluSx SINE Alu 1 302 -10 424 297 35 28 chr10 91131905 91132050 -49184715 + MIR3 SINE MIR 40 185 -23 940 168 114 6 chr10 91133048 91133215 -49183550 - AluJo SINE Alu -127 185 1 270 181 39 142 chr10 91133222 91133248 -49183517 - L1MD3 LINE L1 0 7995 7968 2182 127 0 0 chr10 91133248 91133540 -49183225 - AluSx SINE Alu -20 292 1 270 181 39 142 chr10 91133540 91133586 -49183179 - L1MD3 LINE L1 -27 7968 7939 1982 154 13 3 chr10 91133586 91133892 -49182873 - AluJb SINE Alu -3 309 1 270 181 39 142 chr10 91133892 91133945 -49182820 - L1MD3 LINE L1 -56 7939 7882 2202 129 3 0 chr10 91133973 91134275 -49182490 + AluSx SINE Alu 1 303 -9 826 145 0 0 chr10 91134288 91134405 -49182360 - FLAM_C SINE Alu -16 117 1 469 235 130 6 chr10 91134407 91134569 -49182196 - L1MC4a LINE L1 -90 7718 7537 765 132 9 0 chr10 91135094 91135208 -49181557 - AluJo SINE Alu -177 135 21 799 134 56 0 chr10 91135449 91135591 -49181174 - MER66A LTR ERV1 -83 395 246 6779 59 0 18 chr10 91135600 91136947 -49179818 - L1PA6 LINE L1 0 6154 4811 392 266 19 57 chr10 91137119 91137277 -49179488 + MLT1H-int LTR MaLR 1032 1183 -188 180 111 0 0 chr10 91137403 91137430 -49179335 + (TG)n Simple_repeat Simple_repeat 1 27 0 914 214 98 96 chr10 91137509 91137948 -49178817 + MLT1H LTR MaLR 76 515 -34 300 244 22 22 chr10 91137986 91138076 -49178689 - MLT1H1 LTR MaLR -164 391 302 236 167 0 0 chr10 91138166 91138208 -49178557 + MLT1H LTR MaLR 547 588 -2 2056 120 7 13 chr10 91138218 91138517 -49178248 + AluSx SINE Alu 1 297 -15 341 296 37 9 chr10 91138623 91138731 -49178034 + L2 LINE L2 3199 3309 -4 396 90 346 0 chr10 91138803 91138881 -49177884 + MER83 LTR ERV1 1 105 -343 681 90 0 0 chr10 91139040 91139140 -49177625 + AluSg/x SINE Alu 210 309 0 2349 70 33 3 chr10 91140225 91140525 -49176240 + AluSc SINE Alu 1 309 0 183 42 0 0 chr10 91143901 91143925 -49172840 + (CCCTG)n Simple_repeat Simple_repeat 2 25 0 32 57 0 0 chr10 91143983 91144036 -49172729 + GC_rich Low_complexity Low_complexity 1 53 0 23 86 0 0 chr10 91144240 91144298 -49172467 + GC_rich Low_complexity Low_complexity 1 58 0 201 39 0 0 chr10 91144447 91144473 -49172292 + (CGG)n Simple_repeat Simple_repeat 3 28 0 21 82 0 0 chr10 91144622 91144671 -49172094 + GC_rich Low_complexity Low_complexity 1 49 0 2315 111 0 0 chr10 91149697 91150004 -49166761 - AluSx SINE Alu -5 307 1 829 268 39 13 chr10 91150411 91150642 -49166123 + MIR SINE MIR 23 259 -3 2083 105 3 27 chr10 91151986 91152280 -49164485 - AluSp SINE Alu -26 287 1 26 30 0 0 chr10 91152636 91152669 -49164096 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr10 91152903 91152930 -49163835 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1034 186 16 0 chr10 91153059 91153242 -49163523 - MER5A DNA MER1_type -1 188 3 1683 184 10 10 chr10 91153473 91153772 -49162993 + AluJo SINE Alu 1 299 -13 208 326 79 0 chr10 91153775 91153864 -49162901 + MIR SINE MIR 58 153 -109 700 208 21 42 chr10 91153928 91154120 -49162645 + MER20 DNA MER1_type 4 191 -28 21 0 0 0 chr10 91154456 91154477 -49162288 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 91156105 91156128 -49160637 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 91157398 91157418 -49159347 + (T)n Simple_repeat Simple_repeat 1 20 0 21 71 0 0 chr10 91158042 91158084 -49158681 + AT_rich Low_complexity Low_complexity 1 42 0 2304 54 0 11 chr10 91158554 91158832 -49157933 - AluY SINE Alu -15 296 22 276 77 0 0 chr10 91159582 91159621 -49157144 + (TG)n Simple_repeat Simple_repeat 2 40 0 2241 109 3 3 chr10 91159792 91160103 -49156662 - AluSx SINE Alu 0 312 2 338 292 46 74 chr10 91161229 91161445 -49155320 - MIR SINE MIR -2 260 51 191 292 77 0 chr10 91161457 91161522 -49155243 + MIR SINE MIR 183 252 -10 7019 51 0 0 chr10 91161706 91162689 -49154076 - L1PA5 LINE L1 -6 6148 5155 289 134 20 0 chr10 91164030 91164096 -49152669 + L1ME3 LINE L1 6090 6160 -2 728 206 153 16 chr10 91164295 91164484 -49152281 - MIR SINE MIR -8 254 40 403 309 17 0 chr10 91164486 91164661 -49152104 + L1ME4a LINE L1 5649 5826 -295 782 267 74 0 chr10 91165385 91165587 -49151178 - MIR SINE MIR -44 218 2 505 274 203 19 chr10 91166110 91166322 -49150443 + MIR SINE MIR 8 258 -4 216 366 86 72 chr10 91166569 91167001 -49149764 + L2 LINE L2 2834 3271 -1 1331 245 110 0 chr10 91167100 91167455 -49149310 + MSTD LTR MaLR 1 394 -2 4210 245 63 29 chr10 91167455 91168714 -49148051 + MSTD-int LTR MaLR 2 1303 -432 372 155 14 0 chr10 91168702 91168773 -49147992 + MSTD-int LTR MaLR 1664 1735 0 * 1433 204 82 22 chr10 91168773 91169140 -49147625 + MSTD LTR MaLR 1 389 -7 21 36 0 0 chr10 91169347 91169375 -49147390 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 91169704 91169725 -49147040 + AT_rich Low_complexity Low_complexity 1 21 0 250 298 142 5 chr10 91170086 91170291 -49146474 - L1ME4a LINE L1 -12 6109 5877 258 256 93 58 chr10 91170517 91170689 -49146076 - L1MC5 LINE L1 -473 7488 7311 343 298 80 18 chr10 91170703 91171169 -49145596 - L1MC4 LINE L1 -582 7460 6971 1551 197 38 10 chr10 91171196 91171485 -49145280 - AluJb SINE Alu -15 297 1 994 281 42 8 chr10 91171510 91171863 -49144902 - L1MC4 LINE L1 -980 7062 6698 1851 168 31 0 chr10 91172013 91172305 -49144460 + AluJb SINE Alu 3 303 -9 792 162 0 22 chr10 91172316 91172452 -49144313 + FLAM_C SINE Alu 1 133 0 342 288 64 69 chr10 91172766 91172999 -49143766 - L1MC4a LINE L1 -1751 6057 5826 432 183 14 0 chr10 91173476 91173547 -49143218 - Tigger2 DNA MER2_type 0 2718 2647 22 0 0 0 chr10 91174278 91174300 -49142465 + AT_rich Low_complexity Low_complexity 1 22 0 648 168 0 80 chr10 91174596 91174733 -49142032 + FLAM_A SINE Alu 1 126 -7 2080 112 30 0 chr10 91176627 91176922 -49139843 - AluSq SINE Alu -9 304 1 39086 75 5 13 chr10 91177384 91183559 -49133206 - L1PA6 LINE L1 -7 6147 11 2066 141 0 0 chr10 91183568 91183873 -49132892 - AluJb SINE Alu -7 305 1 325 257 101 9 chr10 91184012 91184121 -49132644 + MER103 DNA DNA 15 133 -33 246 158 0 53 chr10 91184124 91184181 -49132584 + T-rich Low_complexity Low_complexity 3 56 0 1700 161 25 11 chr10 91184344 91184629 -49132136 - AluJo SINE Alu -21 291 3 600 152 86 53 chr10 91184882 91185033 -49131732 - L1MB5 LINE L1 0 6174 6019 2114 107 10 10 chr10 91185046 91185345 -49131420 - AluSx SINE Alu -4 308 10 247 325 154 62 chr10 91185439 91185679 -49131086 - MIR SINE MIR 0 262 1 566 253 51 6 chr10 91185730 91185888 -49130877 + Charlie8 DNA MER1_type 46 210 -2207 1215 277 160 9 chr10 91186146 91186709 -49130056 + HAL1 LINE L1 1316 1963 -544 402 329 114 36 chr10 91186773 91187080 -49129685 + HAL1 LINE L1 2158 2488 -19 309 39 0 77 chr10 91187089 91187167 -49129598 + (TA)n Simple_repeat Simple_repeat 1 72 0 9510 194 94 61 chr10 91187172 91188015 -49128750 - L1MB3 LINE L1 -62 6357 5543 1814 119 51 37 chr10 91188015 91188309 -49128456 + AluSg SINE Alu 1 298 -12 9510 194 94 61 chr10 91188309 91188894 -49127871 - L1MB3 LINE L1 -876 5543 4978 1689 201 0 0 chr10 91188894 91189182 -49127583 - AluJo SINE Alu -24 288 1 9510 194 94 61 chr10 91189182 91190006 -49126759 - L1MB3 LINE L1 -1441 4978 4182 1958 135 10 10 chr10 91190006 91190303 -49126462 - AluSx SINE Alu -15 297 1 9510 194 94 61 chr10 91190303 91191507 -49125258 - L1MB3 LINE L1 -2237 4182 3019 2103 130 0 3 chr10 91191507 91191800 -49124965 - AluSx SINE Alu -20 292 1 9510 194 94 61 chr10 91191800 91193995 -49122770 - L1MB3 LINE L1 -3400 3019 454 207 0 0 0 chr10 91193995 91194018 -49122747 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9510 194 94 61 chr10 91194018 91194458 -49122307 - L1MB3 LINE L1 -5965 454 30 2301 98 0 16 chr10 91194467 91194772 -49121993 - AluSx SINE Alu -12 300 1 329 276 11 0 chr10 91196056 91196143 -49120622 - LTR67 LTR ERVL -9 548 461 397 272 155 48 chr10 91196634 91197214 -49119551 - L1MC4a LINE L1 -1887 5921 5280 2250 120 0 0 chr10 91197569 91197868 -49118897 - AluSx SINE Alu -13 299 1 873 174 45 25 chr10 91198638 91198839 -49117926 - MER3 DNA MER1_type -4 205 1 24 53 0 0 chr10 91198995 91199033 -49117732 + AT_rich Low_complexity Low_complexity 1 38 0 2076 202 56 31 chr10 91199035 91199108 -49117657 - L1ME1 LINE L1 -5 6161 6091 252 0 0 0 chr10 91199108 91199136 -49117629 + (CA)n Simple_repeat Simple_repeat 2 29 0 2076 202 56 31 chr10 91199136 91199601 -49117164 - L1ME1 LINE L1 -75 6091 5610 2030 201 86 21 chr10 91199599 91200103 -49116662 + L1ME LINE L1 4793 5367 -797 * 2006 141 0 22 chr10 91200103 91200422 -49116343 + AluJb SINE Alu 1 312 0 2030 201 86 21 chr10 91200422 91200663 -49116102 + L1ME LINE L1 5367 5591 -573 338 97 0 68 chr10 91200733 91200836 -49115929 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 2134 129 7 3 chr10 91200837 91201147 -49115618 - AluSx SINE Alu -1 311 1 1559 135 61 36 chr10 91201568 91201932 -49114833 + MSTA LTR MaLR 1 375 0 268 333 0 0 chr10 91202165 91202234 -49114531 + L2 LINE L2 3241 3309 -4 638 257 111 24 chr10 91202259 91202637 -49114128 - L1ME LINE L1 -5130 940 530 371 188 50 0 chr10 91203103 91203183 -49113582 - Charlie4 DNA MER1_type -1737 224 141 2948 238 93 18 chr10 91203293 91204313 -49112452 - HAL1 LINE L1 -310 2197 1101 315 221 91 0 chr10 91204313 91204390 -49112375 + MIR SINE MIR 158 241 -21 360 292 58 26 chr10 91204447 91204601 -49112164 + MIR SINE MIR 59 217 -45 346 396 68 43 chr10 91206002 91206441 -49110324 - L2 LINE L2 -12 3260 2811 705 171 1 14 chr10 91207053 91207191 -49109574 - MIR3 SINE MIR -4 204 67 419 318 62 17 chr10 91208558 91208734 -49108031 + MIR SINE MIR 5 188 -74 529 238 53 21 chr10 91209430 91209732 -49107033 - MER46C DNA MER2_type 0 338 2 21 36 0 0 chr10 91209756 91209784 -49106981 + AT_rich Low_complexity Low_complexity 1 28 0 382 312 45 0 chr10 91210406 91210560 -49106205 + MIR SINE MIR 102 262 0 21 36 0 0 chr10 91210791 91210819 -49105946 + AT_rich Low_complexity Low_complexity 1 28 0 541 328 162 54 chr10 91211211 91211897 -49104868 + L3 LINE CR1 151 910 -667 1206 180 18 26 chr10 91212912 91213184 -49103581 - L1MA9 LINE L1 0 6312 6043 2391 74 0 13 chr10 91214243 91214541 -49102224 + AluSc SINE Alu 1 294 -15 180 328 31 0 chr10 91217229 91217293 -49099472 - MIR SINE MIR -122 140 75 2263 97 6 28 chr10 91218884 91219203 -49097562 - AluSx SINE Alu 0 312 1 23 54 0 0 chr10 91219250 91219287 -49097478 + AT_rich Low_complexity Low_complexity 1 37 0 213 305 12 12 chr10 91219652 91219734 -49097031 - MIR3 SINE MIR -6 202 121 1626 168 0 11 chr10 91219741 91220003 -49096762 + AluJb SINE Alu 1 259 -53 936 282 89 58 chr10 91220272 91220665 -49096100 - MLT1K LTR MaLR -10 578 174 388 279 106 31 chr10 91221567 91221793 -49094972 + L1M4 LINE L1 2266 2508 -3638 6030 143 87 5 chr10 91221860 91222965 -49093800 + Tigger3b DNA MER2_type 1 1196 -35 22 56 0 0 chr10 91223005 91223041 -49093724 + AT_rich Low_complexity Low_complexity 1 36 0 23 86 0 0 chr10 91223159 91223217 -49093548 + AT_rich Low_complexity Low_complexity 1 58 0 419 233 42 8 chr10 91224533 91224653 -49092112 + MIR SINE MIR 127 250 -12 22 0 0 0 chr10 91225659 91225681 -49091084 + AT_rich Low_complexity Low_complexity 1 22 0 1232 173 82 8 chr10 91225768 91225885 -49090880 + AluSx SINE Alu 1 108 -204 219 69 0 0 chr10 91225885 91225914 -49090851 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1232 173 82 8 chr10 91225914 91226051 -49090714 + AluSx SINE Alu 108 274 -38 911 92 46 7 chr10 91226786 91226939 -49089826 - Tigger2 DNA MER2_type -99 2619 2461 3917 146 44 37 chr10 91226996 91227189 -49089576 - Tigger2 DNA MER2_type -1965 753 563 2301 107 0 0 chr10 91227189 91227499 -49089266 + AluSg SINE Alu 1 310 0 3917 146 44 37 chr10 91227499 91228053 -49088712 - Tigger2 DNA MER2_type -2155 563 1 1927 133 10 3 chr10 91228236 91228537 -49088228 + AluSx SINE Alu 1 303 -9 2661 35 3 0 chr10 91229557 91229867 -49086898 + AluY SINE Alu 1 311 0 208 200 0 55 chr10 91229987 91230042 -49086723 - MIR SINE MIR -74 188 137 2078 111 10 7 chr10 91230306 91230604 -49086161 - AluSx SINE Alu -13 299 1 385 303 50 0 chr10 91232368 91232467 -49084298 + MIR SINE MIR 45 148 -60 1980 155 3 0 chr10 91233047 91233357 -49083408 + AluSx SINE Alu 1 311 -1 2117 115 3 3 chr10 91233525 91233812 -49082953 + AluSx SINE Alu 6 292 -20 734 225 91 0 chr10 91234753 91234940 -49081825 - L1PB4 LINE L1 0 6156 5953 1809 135 123 76 chr10 91234958 91235365 -49081400 - MSTB LTR MaLR 0 426 1 208 143 36 0 chr10 91236166 91236222 -49080543 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 91236816 91236838 -49079927 + AT_rich Low_complexity Low_complexity 1 22 0 254 167 0 0 chr10 91237964 91238012 -49078753 - AluJo SINE Alu 0 302 255 1078 164 0 33 chr10 91238012 91238195 -49078570 - AluJo SINE Alu -135 177 1 2259 92 3 10 chr10 91238408 91238712 -49078053 + AluSq SINE Alu 2 303 -10 21 57 0 0 chr10 91240395 91240430 -49076335 + AT_rich Low_complexity Low_complexity 1 35 0 207 100 0 0 chr10 91240439 91240469 -49076296 + (T)n Simple_repeat Simple_repeat 1 30 0 478 333 125 14 chr10 91241037 91241334 -49075431 + L2 LINE L2 2633 2962 -352 1919 128 3 24 chr10 91241789 91242079 -49074686 + AluSx SINE Alu 20 303 -9 360 0 0 0 chr10 91242084 91242124 -49074641 + (CA)n Simple_repeat Simple_repeat 2 41 0 213 39 0 0 chr10 91242145 91242171 -49074594 + (TATG)n Simple_repeat Simple_repeat 2 27 0 2556 97 78 0 chr10 91242288 91242699 -49074066 - L1MA5 LINE L1 -4 6296 5854 560 346 100 7 chr10 91242863 91243143 -49073622 - L2 LINE L2 -149 3164 2859 336 251 100 125 chr10 91243157 91243468 -49073297 - L2 LINE L2 -557 2757 2455 418 303 101 35 chr10 91243495 91243693 -49073072 + MIR SINE MIR 2 212 -50 1692 160 44 4 chr10 91243841 91244116 -49072649 + AluJb SINE Alu 1 286 -26 243 0 0 0 chr10 91244116 91244143 -49072622 + (CA)n Simple_repeat Simple_repeat 2 28 0 1852 156 10 7 chr10 91244331 91244632 -49072133 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr10 91246483 91246509 -49070256 + (T)n Simple_repeat Simple_repeat 1 26 0 190 56 56 0 chr10 91247432 91247468 -49069297 + (TA)n Simple_repeat Simple_repeat 1 38 0 189 0 0 0 chr10 91248492 91248513 -49068252 + (A)n Simple_repeat Simple_repeat 1 21 0 257 280 0 42 chr10 91249896 91250014 -49066751 - L1ME4a LINE L1 -78 6043 5931 44 0 0 0 chr10 91250773 91250817 -49065948 + AT_rich Low_complexity Low_complexity 1 44 0 228 35 0 0 chr10 91251134 91251163 -49065602 + (TG)n Simple_repeat Simple_repeat 1 29 0 415 287 132 15 chr10 91251521 91251657 -49065108 - L2 LINE L2 -5 3267 3116 393 228 126 120 chr10 91251734 91252059 -49064706 + MLT1I LTR MaLR 83 409 0 627 248 120 12 chr10 91252180 91252430 -49064335 - L2 LINE L2 -16 3297 3021 232 250 130 40 chr10 91254650 91254750 -49062015 - MIR SINE MIR -113 149 41 1680 170 7 11 chr10 91254818 91255101 -49061664 + AluJo SINE Alu 1 282 -30 226 365 45 13 chr10 91255555 91255711 -49061054 - L2 LINE L2 -336 2977 2817 1012 180 12 55 chr10 91255769 91256024 -49060741 - Charlie1 DNA MER1_type -525 2236 1993 1158 261 79 69 chr10 91256184 91256867 -49059898 + L1ME LINE L1 271 960 -5110 535 308 71 5 chr10 91257663 91257861 -49058904 - MIR SINE MIR -47 215 5 740 177 190 4 chr10 91257940 91258166 -49058599 - Charlie1 DNA MER1_type -5 2756 2489 2205 94 20 3 chr10 91258178 91258475 -49058290 - AluSx SINE Alu -9 303 2 814 179 12 24 chr10 91258476 91258644 -49058121 - Charlie1 DNA MER1_type -683 2078 1913 357 375 73 43 chr10 91258729 91259057 -49057708 + L3 LINE CR1 46 383 -1194 515 331 23 17 chr10 91259326 91259498 -49057267 + MIR3 SINE MIR 3 175 -33 1278 153 27 97 chr10 91259585 91259824 -49056941 + MER33 DNA MER1_type 1 188 -2397 1782 168 0 3 chr10 91259824 91260110 -49056655 - AluJb SINE Alu -17 295 11 1278 153 27 97 chr10 91260110 91260234 -49056531 + MER33 DNA MER1_type 188 319 -5 389 236 81 32 chr10 91260596 91260719 -49056046 + MIR SINE MIR 17 145 -117 1628 188 0 11 chr10 91261274 91261583 -49055182 - AluSx SINE Alu 0 306 1 2099 126 0 3 chr10 91261800 91262102 -49054663 - AluSq SINE Alu -12 301 1 21 36 0 0 chr10 91262457 91262485 -49054280 + AT_rich Low_complexity Low_complexity 1 28 0 1051 322 109 44 chr10 91262508 91262673 -49054092 + L2 LINE L2 734 887 -2427 2820 16 0 0 chr10 91262673 91262984 -49053781 - AluYa5 SINE Alu 0 311 1 1051 322 109 44 chr10 91262984 91263702 -49053063 + L2 LINE L2 887 1674 -1640 5630 188 23 46 chr10 91263924 91265053 -49051712 + L1MC1 LINE L1 3938 5091 -1242 2278 112 0 0 chr10 91265053 91265356 -49051409 + AluSx SINE Alu 1 303 -9 5630 188 23 46 chr10 91265356 91266685 -49050080 + L1MC1 LINE L1 5091 6333 0 1177 262 93 39 chr10 91266679 91267262 -49049503 + L1MEc LINE L1 859 1498 -4898 * 522 216 49 166 chr10 91267262 91267520 -49049245 - MLT1A1 LTR MaLR -2 363 169 2322 104 0 16 chr10 91267520 91267837 -49048928 + AluSx SINE Alu 1 312 0 522 216 49 166 chr10 91267837 91267989 -49048776 - MLT1A1 LTR MaLR -196 169 1 1177 262 93 39 chr10 91267989 91268200 -49048565 + L1MEc LINE L1 1498 1696 -4700 323 265 59 0 chr10 91268201 91268303 -49048462 + L1MEc LINE L1 1731 1838 -4558 1702 219 26 78 chr10 91268321 91268860 -49047905 - MLT2B1 LTR ERVL 0 520 10 1434 155 4 12 chr10 91268864 91269109 -49047656 - MLT2D LTR ERVL -171 243 1 1880 222 39 41 chr10 91269109 91269366 -49047399 + L1MEc LINE L1 1855 2111 -4104 1994 145 0 7 chr10 91269366 91269663 -49047102 + AluJo SINE Alu 2 296 -16 1880 222 39 41 chr10 91269663 91270208 -49046557 + L1MEc LINE L1 2111 2614 -3601 2244 116 7 0 chr10 91270424 91270734 -49046031 - AluSx SINE Alu 0 312 1 1543 192 96 3 chr10 91270981 91271346 -49045419 - L1MB7 LINE L1 -19 6165 5767 2404 64 0 16 chr10 91271857 91272170 -49044595 + AluSc SINE Alu 1 308 -1 1363 247 140 30 chr10 91272633 91273290 -49043475 - HAL1 LINE L1 -154 2353 1625 1887 106 18 18 chr10 91273308 91273581 -49043184 + AluSx SINE Alu 22 294 -18 256 275 14 0 chr10 91273732 91273801 -49042964 - MIR SINE MIR -27 235 166 782 221 46 173 chr10 91273873 91274463 -49042302 - HAL1 LINE L1 -981 1526 1063 2189 113 3 10 chr10 91274463 91274774 -49041991 - AluSc SINE Alu 0 309 1 782 221 46 173 chr10 91274774 91274985 -49041780 - HAL1 LINE L1 -1444 1063 827 1160 279 179 21 chr10 91275328 91276002 -49040763 + L2 LINE L2 1976 2756 -558 2057 145 3 3 chr10 91276141 91276451 -49040314 - AluSx SINE Alu -2 310 1 1644 172 21 7 chr10 91276689 91276980 -49039785 - AluJo SINE Alu -14 298 4 342 384 23 0 chr10 91277384 91277517 -49039248 + HAL1b LINE L1 59 194 -1154 2611 144 58 15 chr10 91277770 91278180 -49038585 - MSTA LTR MaLR 0 428 1 11127 140 7 2 chr10 91278225 91280684 -49036081 + L1PA10 LINE L1 3700 6166 -2 312 295 50 45 chr10 91280990 91281190 -49035575 + L1M4c LINE L1 2276 2476 -3908 258 273 0 81 chr10 91281232 91281331 -49035434 - L2 LINE L2 0 3313 3223 2430 89 0 0 chr10 91281698 91282001 -49034764 - AluSq SINE Alu -10 303 1 336 286 99 22 chr10 91282069 91282251 -49034514 + L1ME4a LINE L1 5917 6112 -9 31 26 0 0 chr10 91282257 91282295 -49034470 + AT_rich Low_complexity Low_complexity 1 38 0 340 230 67 52 chr10 91282706 91282841 -49033924 + MIR SINE MIR 10 146 -116 231 229 0 0 chr10 91282889 91282950 -49033815 + (TA)n Simple_repeat Simple_repeat 1 61 0 287 256 132 33 chr10 91283021 91283142 -49033623 - L2 LINE L2 0 3313 3181 1795 157 3 23 chr10 91284509 91284815 -49031950 + AluJb SINE Alu 6 305 -7 238 53 84 95 chr10 91284987 91285082 -49031683 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 335 180 11 0 chr10 91285101 91285181 -49031584 + (TA)n Simple_repeat Simple_repeat 2 85 -6 2521 68 3 3 chr10 91285181 91285490 -49031275 - AluY SINE Alu -2 309 1 335 180 11 0 chr10 91285490 91285498 -49031267 + (TA)n Simple_repeat Simple_repeat 85 91 0 272 283 0 0 chr10 91285549 91285648 -49031117 + (TA)n Simple_repeat Simple_repeat 2 100 0 212 349 87 35 chr10 91285831 91286003 -49030762 - L2 LINE L2 -337 2977 2797 693 161 0 0 chr10 91286728 91286852 -49029913 - L1MA3 LINE L1 0 6305 6182 2099 122 19 86 chr10 91286871 91287203 -49029562 + L1MA3 LINE L1 5735 6088 -217 2139 117 0 3 chr10 91287203 91287493 -49029272 + AluSx SINE Alu 1 289 -23 2099 122 19 86 chr10 91287493 91287542 -49029223 + L1MA3 LINE L1 6088 6088 -217 2388 91 3 0 chr10 91287542 91287840 -49028925 - AluSp SINE Alu -14 299 1 2099 122 19 86 chr10 91287840 91287874 -49028891 + L1MA3 LINE L1 6088 6123 -182 1332 155 5 14 chr10 91287875 91288088 -49028677 + AluJo SINE Alu 87 297 -15 309 334 107 24 chr10 91288126 91288426 -49028339 - L2 LINE L2 -224 3048 2712 204 125 0 0 chr10 91288426 91288458 -49028307 + (CTCA)n Simple_repeat Simple_repeat 4 35 0 696 232 45 17 chr10 91288528 91288705 -49028060 + MLT1J1 LTR MaLR 3 184 -262 361 263 20 40 chr10 91288960 91289112 -49027653 - L2 LINE L2 -734 2580 2432 1716 171 10 20 chr10 91289197 91289490 -49027275 - AluJo SINE Alu -22 290 1 2447 88 0 0 chr10 91289952 91290260 -49026505 - AluSx SINE Alu -4 308 1 487 248 15 29 chr10 91290349 91290486 -49026279 - L2 LINE L2 -4 3309 3175 249 298 138 11 chr10 91290492 91290673 -49026092 - L2 LINE L2 -1303 2011 1808 1577 198 75 37 chr10 91290673 91290974 -49025791 - MLT1A1 LTR MaLR 0 365 48 2776 98 14 6 chr10 91290974 91291332 -49025433 + THE1B LTR MaLR 4 364 0 1577 198 75 37 chr10 91291332 91291378 -49025387 - MLT1A1 LTR MaLR -317 48 5 323 250 115 31 chr10 91291983 91292079 -49024686 + MER91A DNA MER1_type 23 126 -70 800 171 0 0 chr10 91292102 91292225 -49024540 - FLAM_C SINE Alu -20 123 1 830 150 100 61 chr10 91293097 91293201 -49023564 - MER5A DNA MER1_type -1 188 73 2417 89 0 0 chr10 91293201 91293505 -49023260 - AluSx SINE Alu -8 304 1 830 150 100 61 chr10 91293505 91293580 -49023185 - MER5A DNA MER1_type -116 73 2 314 275 84 40 chr10 91294172 91294458 -49022307 - L1MC/D LINE L1 -642 5520 5282 2394 89 0 3 chr10 91294811 91295114 -49021651 - AluSg SINE Alu -8 302 1 592 129 0 0 chr10 91295232 91295317 -49021448 + AluSg/x SINE Alu 216 300 -12 183 42 0 0 chr10 91295382 91295406 -49021359 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1539 173 7 53 chr10 91295406 91295706 -49021059 - AluJo SINE Alu -26 286 1 2345 166 73 14 chr10 91295793 91296220 -49020545 - LTR47A LTR ERVL 0 452 1 379 277 129 86 chr10 91296235 91296640 -49020125 - L1MC/D LINE L1 -1624 4522 4079 1713 180 7 0 chr10 91296640 91296935 -49019830 - AluJo SINE Alu -13 299 3 379 277 129 86 chr10 91296935 91297157 -49019608 - L1MC/D LINE L1 -2067 4079 3868 319 274 58 62 chr10 91297696 91297782 -49018983 - L1P LINE L1 -1861 4285 4200 1806 161 20 7 chr10 91297782 91298081 -49018684 + AluJb SINE Alu 1 303 -9 319 274 58 62 chr10 91298081 91298380 -49018385 - L1P LINE L1 -1946 4200 3899 2066 150 3 0 chr10 91299625 91299932 -49016833 - AluSx SINE Alu -2 310 3 183 375 28 45 chr10 91300919 91301095 -49015670 - L2 LINE L2 -249 3023 2851 1451 185 21 28 chr10 91301300 91301612 -49015153 + AluJo SINE Alu 1 310 0 207 217 22 0 chr10 91301780 91301826 -49014939 + GA-rich Low_complexity Low_complexity 2 48 0 2657 184 32 100 chr10 91302971 91303358 -49013407 + L1MA9 LINE L1 5601 5918 -394 1721 164 49 7 chr10 91303358 91303644 -49013121 + AluJb SINE Alu 5 302 -10 2657 184 32 100 chr10 91303644 91303978 -49012787 + L1MA9 LINE L1 5918 6273 -39 226 229 28 73 chr10 91304349 91304458 -49012307 - MLT1L LTR MaLR 0 615 512 336 260 68 61 chr10 91304612 91304827 -49011938 - MLT1J LTR MaLR -310 201 3 538 278 7 21 chr10 91304844 91304988 -49011777 - MIR SINE MIR -120 142 1 889 315 78 50 chr10 91305240 91306192 -49010573 + L2 LINE L2 2339 3313 0 2515 74 0 0 chr10 91306285 91306596 -49010169 + AluY SINE Alu 1 311 0 2442 90 0 0 chr10 91306602 91306913 -49009852 + AluSq SINE Alu 1 311 -2 1061 265 121 17 chr10 91307694 91308049 -49008716 - MLT1J2 LTR MaLR -58 392 1 205 304 98 20 chr10 91308050 91308152 -49008613 - MIR SINE MIR -150 112 3 28 61 0 0 chr10 91308172 91308221 -49008544 + AT_rich Low_complexity Low_complexity 1 49 0 1325 263 116 11 chr10 91308641 91309105 -49007660 + HsTC2 DNA Tc2 1 513 -1385 2392 63 40 0 chr10 91309125 91309424 -49007341 - AluY SINE Alu 0 311 1 1251 224 139 5 chr10 91309426 91309819 -49006946 + HsTC2 DNA Tc2 1283 1892 -6 2325 90 7 0 chr10 91310993 91311292 -49005473 - AluSp SINE Alu -12 301 1 393 291 110 53 chr10 91311548 91311775 -49004990 - L1ME4a LINE L1 -259 5862 5623 711 284 65 60 chr10 91312255 91312671 -49004094 - MARNA DNA Mariner -44 542 125 1832 161 44 0 chr10 91313008 91313325 -49003440 - L1MC1 LINE L1 -1 6332 6002 744 286 88 28 chr10 91313349 91313713 -49003052 - LTR16A LTR ERVL -6 444 59 590 276 73 0 chr10 91313767 91314013 -49002752 - L1ME4a LINE L1 -183 5938 5675 1934 150 7 0 chr10 91314131 91314437 -49002328 + AluSx SINE Alu 1 308 -4 420 227 82 0 chr10 91314459 91314556 -49002209 - MIR SINE MIR -68 194 90 357 303 73 6 chr10 91314630 91314795 -49001970 - L1ME4a LINE L1 -452 5669 5494 235 309 21 11 chr10 91315621 91315715 -49001050 + MIR SINE MIR 159 253 -9 408 285 7 49 chr10 91315786 91315930 -49000835 + MIR SINE MIR 110 247 -15 529 95 0 0 chr10 91316063 91316137 -49000628 - L1MA9 LINE L1 -6 6306 6233 2004 166 3 18 chr10 91316137 91316475 -49000290 + MER44D DNA MER2_type 2 604 -5 1948 185 57 5 chr10 91316478 91316884 -48999881 - L1MA9 LINE L1 -75 6237 5811 228 284 0 0 chr10 91316981 91317055 -48999710 + T-rich Low_complexity Low_complexity 1 74 0 1542 143 9 5 chr10 91317800 91318023 -48998742 - MER58A DNA MER1_type 0 224 1 1166 182 82 46 chr10 91318193 91318473 -48998292 - MLT1C LTR MaLR -3 464 175 2164 135 0 6 chr10 91318474 91318786 -48997979 - AluSx SINE Alu -1 311 2 1010 104 8 0 chr10 91318787 91318921 -48997844 - AluSq/x SINE Alu -177 135 1 716 202 81 35 chr10 91318921 91319094 -48997671 - MLT1C LTR MaLR -209 181 1 209 365 27 64 chr10 91319211 91319430 -48997335 - L2 LINE L2 -258 3014 2804 521 263 95 11 chr10 91319747 91319926 -48996839 - MIR SINE MIR 0 262 69 2251 84 0 3 chr10 91320286 91320602 -48996163 + AluSg SINE Alu 1 315 0 842 275 168 38 chr10 91322695 91323359 -48993406 - L2 LINE L2 -2 3311 2560 2190 128 0 0 chr10 91323478 91323776 -48992989 - AluSx SINE Alu -10 302 5 982 177 0 0 chr10 91324101 91324259 -48992506 - AluJb SINE Alu -10 302 145 853 193 132 95 chr10 91324259 91324637 -48992128 - LTR37B LTR ERV1 -68 400 9 391 282 94 88 chr10 91324780 91325099 -48991666 - L2 LINE L2 0 3272 2952 287 250 14 0 chr10 91326093 91326165 -48990600 + (ATGGTG)n Simple_repeat Simple_repeat 4 76 0 385 175 234 22 chr10 91326166 91326303 -48990462 - MIR SINE MIR -5 257 92 1459 128 70 16 chr10 91326434 91326676 -48990089 + L1PA16 LINE L1 5903 6157 -9 368 169 0 62 chr10 91327301 91327431 -48989334 + T-rich Low_complexity Low_complexity 2 123 0 3140 197 119 12 chr10 91328241 91328430 -48988335 + MER99 DNA DNA 3 170 -658 1431 126 63 0 chr10 91328430 91328652 -48988113 - MER46A DNA MER2_type 0 236 1 3140 197 119 12 chr10 91328652 91329207 -48987558 + MER99 DNA DNA 170 827 -1 2266 114 0 25 chr10 91329432 91329747 -48987018 + AluSg SINE Alu 1 307 -3 339 246 254 0 chr10 91329908 91330026 -48986739 + MIR SINE MIR 40 187 -75 415 271 0 112 chr10 91330720 91330862 -48985903 + MIR SINE MIR 73 185 -77 832 182 6 6 chr10 91330862 91331027 -48985738 + L1MB3 LINE L1 6017 6181 -2 415 271 0 112 chr10 91331027 91331098 -48985667 + MIR SINE MIR 185 262 0 236 283 250 13 chr10 91332199 91332351 -48984414 - MIR SINE MIR -62 200 13 534 301 143 0 chr10 91332616 91332819 -48983946 + MIR SINE MIR 15 246 -16 2028 144 3 10 chr10 91332927 91333232 -48983533 - AluJb SINE Alu -9 303 1 409 318 153 50 chr10 91333236 91333557 -48983208 - L2 LINE L2 -1 3271 2918 283 265 162 15 chr10 91334129 91334265 -48982500 + MIR SINE MIR 102 257 -5 413 272 67 84 chr10 91334302 91334541 -48982224 + MIR SINE MIR 23 257 -5 419 255 110 7 chr10 91334552 91334697 -48982068 - MIR SINE MIR -25 237 78 2867 13 0 0 chr10 91334743 91335049 -48981716 + AluYa5 SINE Alu 1 306 -5 205 29 29 29 chr10 91335255 91335290 -48981475 + (CAA)n Simple_repeat Simple_repeat 2 36 0 213 270 34 22 chr10 91335430 91335519 -48981246 - MIR3 SINE MIR -36 172 83 265 203 38 0 chr10 91335679 91335758 -48981007 + L1ME4a LINE L1 6038 6119 -2 1723 158 47 7 chr10 91335783 91335942 -48980823 - AluJo SINE Alu -22 290 114 189 0 0 0 chr10 91335942 91335963 -48980802 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1723 158 47 7 chr10 91335963 91336082 -48980683 - AluJo SINE Alu -198 114 1 603 306 128 34 chr10 91336555 91336970 -48979795 - L2 LINE L2 0 3313 2860 585 230 7 14 chr10 91337009 91337157 -48979608 + L2 LINE L2 3167 3313 0 517 326 79 21 chr10 91337131 91337511 -48979254 - L2 LINE L2 -416 2898 2497 * 205 152 43 0 chr10 91337567 91337613 -48979152 + (TATAA)n Simple_repeat Simple_repeat 3 50 0 605 270 72 98 chr10 91337656 91338074 -48978691 + MLT1J LTR MaLR 105 511 0 264 158 0 0 chr10 91338180 91338237 -48978528 + (TG)n Simple_repeat Simple_repeat 2 58 0 417 20 0 0 chr10 91338237 91338287 -48978478 + (GA)n Simple_repeat Simple_repeat 1 50 0 833 272 34 45 chr10 91338291 91338644 -48978121 - L2 LINE L2 -945 2369 2021 272 287 74 25 chr10 91339412 91339534 -48977231 - L2 LINE L2 -1 3271 3144 312 325 153 0 chr10 91339643 91339800 -48976965 + MER5A DNA MER1_type 9 189 0 443 263 26 0 chr10 91339818 91339932 -48976833 - L2 LINE L2 -263 3050 2934 440 192 0 0 chr10 91340079 91340152 -48976613 - AluJ/FLAM SINE Alu -238 74 2 2035 134 0 26 chr10 91340204 91340509 -48976256 + AluSx SINE Alu 1 297 -15 1109 146 0 55 chr10 91341767 91341987 -48974778 + AluSx SINE Alu 1 208 -104 337 202 42 92 chr10 91342390 91342509 -48974256 - L2 LINE L2 0 3313 3201 288 56 0 0 chr10 91342540 91342576 -48974189 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 2901 29 3 20 chr10 91342656 91343006 -48973759 - L1PA4 LINE L1 -1 6154 5811 276 170 0 21 chr10 91343063 91343110 -48973655 + Alu SINE Alu 2 47 -256 842 64 0 0 chr10 91343618 91343728 -48973037 + L1PA13 LINE L1 6051 6160 -3 183 80 0 0 chr10 91343751 91343776 -48972989 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1793 167 17 0 chr10 91343867 91344154 -48972611 - AluSx SINE Alu -19 293 2 354 296 93 21 chr10 91344853 91345187 -48971578 + L1MC4 LINE L1 7103 7460 -582 281 256 93 58 chr10 91345201 91345373 -48971392 + L1MC5 LINE L1 7311 7488 -473 778 254 71 36 chr10 91346639 91347032 -48969733 + L1MC4 LINE L1 6656 7062 -980 1554 194 38 10 chr10 91347057 91347346 -48969419 + AluJb SINE Alu 1 297 -15 289 267 57 9 chr10 91347373 91347478 -48969287 + L1MC5 LINE L1 6971 7080 -881 267 376 34 0 chr10 91398471 91398588 -48918177 + G-rich Low_complexity Low_complexity 6 126 0 * 464 273 11 33 chr10 91398518 91398701 -48918064 + GA-rich Low_complexity Low_complexity 1 179 0 389 293 60 13 chr10 91400056 91400206 -48916559 - MIR SINE MIR -50 212 56 568 285 17 22 chr10 91400267 91400446 -48916319 - MIR SINE MIR -1 261 84 1573 163 61 22 chr10 91400465 91400778 -48915987 - THE1C LTR MaLR 0 375 51 658 204 35 64 chr10 91400879 91401051 -48915714 - THE1C LTR MaLR -182 193 27 221 333 0 0 chr10 91401057 91401108 -48915657 - MIR SINE MIR -199 63 13 1696 268 107 20 chr10 91402027 91402665 -48914100 + MER115 DNA AcHobo 1 693 0 212 325 86 26 chr10 91402782 91402899 -48913866 + MIR3 SINE MIR 35 158 -50 380 235 76 0 chr10 91402958 91403077 -48913688 - MER103 DNA DNA -2 164 37 653 249 18 12 chr10 91403091 91403260 -48913505 - MIR SINE MIR -7 255 86 4311 163 37 21 chr10 91403413 91404252 -48912513 + L1MB8 LINE L1 5319 6170 -8 551 323 85 8 chr10 91404404 91404652 -48912113 - L2 LINE L2 -1 3271 3005 194 284 135 35 chr10 91404691 91404832 -48911933 - L2 LINE L2 -448 2866 2712 22 0 0 0 chr10 91404881 91404903 -48911862 + AT_rich Low_complexity Low_complexity 1 22 0 255 245 75 21 chr10 91404911 91405005 -48911760 - L1ME LINE L1 -298 5823 5725 192 77 0 0 chr10 91405276 91405302 -48911463 + (TC)n Simple_repeat Simple_repeat 2 27 0 258 290 0 43 chr10 91406054 91406123 -48910642 + MIR SINE MIR 20 85 -123 317 353 19 29 chr10 91406366 91406573 -48910192 + MIR3 SINE MIR 3 207 -1 201 320 179 34 chr10 91408045 91408279 -48908486 - L2 LINE L2 -1 3271 3004 253 321 12 68 chr10 91408398 91408560 -48908205 - L2 LINE L2 -443 2871 2719 314 289 39 39 chr10 91408570 91408698 -48908067 - L2 LINE L2 -8 3305 3178 2045 97 30 0 chr10 91408944 91409212 -48907553 + AluSc SINE Alu 1 276 -33 234 91 0 0 chr10 91409212 91409245 -48907520 + (CA)n Simple_repeat Simple_repeat 1 33 0 846 283 136 7 chr10 91409383 91409669 -48907096 - LTR16C LTR ERVL -137 354 32 335 347 6 54 chr10 91409778 91409806 -48906959 - MIR SINE MIR -84 178 150 1197 146 9 73 chr10 91409806 91410039 -48906726 + MER20 DNA MER1_type 2 219 0 335 347 6 54 chr10 91410039 91410177 -48906588 - MIR SINE MIR -112 150 20 317 312 227 0 chr10 91411312 91411453 -48905312 - L2 LINE L2 -1 3271 3099 1163 190 117 0 chr10 91411738 91412028 -48904737 + MER5C DNA MER1_type 1 324 0 296 277 200 15 chr10 91412033 91412163 -48904602 + L2 LINE L2 3118 3271 -1 201 154 0 0 chr10 91412564 91412603 -48904162 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 396 321 92 0 chr10 91412606 91412737 -48904028 - L2 LINE L2 -3 3269 3127 3388 146 25 41 chr10 91413353 91413920 -48902845 - L1MB7 LINE L1 -19 6165 5608 207 0 0 0 chr10 91413920 91413943 -48902822 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3388 146 25 41 chr10 91413943 91414012 -48902753 - L1MB7 LINE L1 -576 5608 5539 25 0 0 0 chr10 91414012 91414037 -48902728 + AT_rich Low_complexity Low_complexity 1 25 0 218 349 48 0 chr10 91414140 91414223 -48902542 - L2 LINE L2 0 3313 3227 233 369 78 10 chr10 91414253 91414356 -48902409 + L3b LINE CR1 1430 1539 -44 247 220 160 70 chr10 91414642 91414742 -48902023 - MIR SINE MIR -70 192 84 21 0 0 0 chr10 91415049 91415070 -48901695 + AT_rich Low_complexity Low_complexity 1 21 0 698 243 81 19 chr10 91416049 91416259 -48900506 - MIR SINE MIR -38 224 2 250 307 67 63 chr10 91416415 91416653 -48900112 + MIR SINE MIR 20 258 -4 278 289 51 66 chr10 91417812 91418009 -48898756 - MLT1J LTR MaLR -92 419 226 334 245 59 10 chr10 91418092 91418194 -48898571 + MIR SINE MIR 74 180 -82 244 270 202 0 chr10 91418651 91418740 -48898025 + L2 LINE L2 3154 3260 -12 459 236 99 25 chr10 91418918 91419079 -48897686 - MIR SINE MIR -16 246 74 507 239 74 61 chr10 91419214 91419377 -48897388 + MIR SINE MIR 88 252 -10 261 231 359 8 chr10 91419418 91419535 -48897230 - MER5B DNA MER1_type -20 158 1 405 299 124 50 chr10 91419812 91420407 -48896358 - L2 LINE L2 -426 2888 2250 238 183 0 117 chr10 91420507 91420567 -48896198 + Charlie4 DNA MER1_type 1 53 -1908 22 0 0 0 chr10 91420779 91420801 -48895964 + AT_rich Low_complexity Low_complexity 1 22 0 5076 160 49 8 chr10 91420849 91421430 -48895335 + L1MB7 LINE L1 4871 5427 -757 183 42 0 0 chr10 91421430 91421454 -48895311 + (CAT)n Simple_repeat Simple_repeat 3 26 0 5076 160 49 8 chr10 91421454 91422121 -48894644 + L1MB7 LINE L1 5427 6168 -16 300 250 147 9 chr10 91422359 91422475 -48894290 - L2 LINE L2 -13 3300 3169 3492 148 13 27 chr10 91423579 91424214 -48892551 - L1PB1 LINE L1 0 6151 5526 295 114 0 0 chr10 91424407 91424451 -48892314 - L1PB1 LINE L1 -660 5491 5448 238 200 73 18 chr10 91424482 91424537 -48892228 - MER5A DNA MER1_type 0 189 132 2049 146 0 13 chr10 91424542 91424857 -48891908 + AluSx SINE Alu 1 311 -1 509 245 32 27 chr10 91425011 91425166 -48891599 + MIR SINE MIR 4 154 -58 254 307 95 69 chr10 91425504 91425693 -48891072 - L2 LINE L2 -4 3268 3075 718 299 83 37 chr10 91426765 91427196 -48889569 + L2 LINE L2 2863 3313 0 382 192 62 62 chr10 91429151 91429281 -48887484 - MIR3 SINE MIR -1 207 78 516 219 9 9 chr10 91430918 91431023 -48885742 - MER81 DNA DNA 0 114 10 271 215 86 32 chr10 91431183 91431276 -48885489 - L2 LINE L2 -1347 1967 1870 414 308 16 39 chr10 91431341 91431523 -48885242 + MER5B DNA MER1_type 1 178 0 698 265 34 25 chr10 91432568 91432794 -48883971 - MIR SINE MIR -4 258 37 583 279 40 21 chr10 91433516 91433731 -48883034 + MIR SINE MIR 1 214 -48 612 251 31 78 chr10 91433763 91433812 -48882953 - MIR SINE MIR -5 257 207 1220 151 28 14 chr10 91433812 91434024 -48882741 + MER20 DNA MER1_type 1 215 -4 612 251 31 78 chr10 91434024 91434229 -48882536 - MIR SINE MIR -55 207 15 320 255 19 38 chr10 91434309 91434415 -48882350 - MER5A DNA MER1_type 0 189 86 209 297 76 51 chr10 91435050 91435168 -48881597 - L2 LINE L2 0 3272 3152 247 339 102 45 chr10 91435256 91435433 -48881332 + L2 LINE L2 2914 3100 -172 744 288 49 5 chr10 91435830 91436035 -48880730 - MIR SINE MIR -3 259 46 23 0 0 0 chr10 91436725 91436748 -48880017 + AT_rich Low_complexity Low_complexity 1 23 0 313 245 5 132 chr10 91437413 91437534 -48879231 - MLT1J LTR MaLR -171 444 241 287 104 21 0 chr10 91437589 91437637 -48879128 + (ATGTG)n Simple_repeat Simple_repeat 4 52 0 650 292 53 53 chr10 91437733 91438093 -48878672 - MLT1I LTR MaLR -4 405 46 426 372 35 42 chr10 91438191 91438476 -48878289 - L2 LINE L2 -9 3263 2981 365 305 152 20 chr10 91438515 91438666 -48878099 + MIR3 SINE MIR 37 207 -1 2025 130 27 14 chr10 91438920 91439213 -48877552 - AluSx SINE Alu -15 297 1 632 332 75 4 chr10 91439472 91439713 -48877052 - MIR SINE MIR -4 258 1 577 293 65 95 chr10 91439838 91440343 -48876422 - MLT1K LTR MaLR -95 493 4 331 267 23 0 chr10 91440446 91440532 -48876233 + (CACCAT)n Simple_repeat Simple_repeat 2 89 0 557 320 66 22 chr10 91440538 91440766 -48875999 - MIR SINE MIR -7 255 18 199 326 0 35 chr10 91440859 91440945 -48875820 - L3 LINE CR1 -893 684 602 387 307 13 26 chr10 91441240 91441392 -48875373 - MIR SINE MIR -44 164 14 467 277 35 0 chr10 91442045 91442186 -48874579 + MIR SINE MIR 74 219 -43 210 162 0 0 chr10 91442623 91442660 -48874105 + A-rich Low_complexity Low_complexity 1 37 0 209 305 17 0 chr10 91443406 91443465 -48873300 - L3 LINE CR1 -1 1576 1517 222 118 0 0 chr10 91443995 91444029 -48872736 + (TG)n Simple_repeat Simple_repeat 1 34 0 232 206 44 15 chr10 91444029 91444092 -48872673 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 483 224 15 33 chr10 91444103 91444226 -48872539 - MIR SINE MIR -63 145 71 183 326 232 11 chr10 91444252 91444347 -48872418 - MIR SINE MIR -62 146 31 183 288 17 17 chr10 91444885 91444944 -48871821 - MER5A DNA MER1_type 0 189 131 222 37 0 0 chr10 91445371 91445398 -48871367 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1956 149 3 0 chr10 91445400 91445682 -48871083 - AluSx SINE Alu -29 283 1 200 217 0 0 chr10 91446481 91446527 -48870238 + A-rich Low_complexity Low_complexity 1 46 0 557 265 122 77 chr10 91446588 91446795 -48869970 - L1ME3A LINE L1 0 6153 5957 195 69 0 0 chr10 91446795 91446824 -48869941 + (CAATA)n Simple_repeat Simple_repeat 1 29 0 557 265 122 77 chr10 91446824 91447133 -48869632 - L1ME3A LINE L1 -196 5957 5614 3367 265 91 25 chr10 91447142 91448456 -48868309 - L1ME3A LINE L1 -575 5570 4104 230 0 33 0 chr10 91448456 91448486 -48868279 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 3367 265 91 25 chr10 91448486 91448904 -48867861 - L1ME3A LINE L1 -2041 4104 3715 935 271 66 46 chr10 91448933 91449543 -48867222 - L1ME3A LINE L1 -2499 3630 3009 778 225 12 0 chr10 91449546 91449719 -48867046 + MER104 DNA Tc2 1 175 -5 321 248 77 64 chr10 91449798 91450173 -48866592 - L1ME3A LINE L1 -5060 1059 680 334 228 20 0 chr10 91451410 91451511 -48865254 + CT-rich Low_complexity Low_complexity 2 104 0 2193 109 3 0 chr10 91452490 91452783 -48863982 - AluSc SINE Alu -15 294 1 206 333 0 0 chr10 91452917 91452968 -48863797 + L2 LINE L2 3205 3255 -17 419 286 148 20 chr10 91453076 91453279 -48863486 + MIR SINE MIR 34 262 0 278 271 51 68 chr10 91454180 91454298 -48862467 + MIR3 SINE MIR 55 170 -38 2690 109 28 14 chr10 91454317 91454676 -48862089 - THE1B LTR MaLR 0 364 1 398 253 59 35 chr10 91454889 91455097 -48861668 - MIR SINE MIR -1 261 2 473 163 11 11 chr10 91455164 91455256 -48861509 - MIR SINE MIR -71 191 100 230 323 46 8 chr10 91455529 91455659 -48861106 + LTR67 LTR ERVL 46 180 -377 259 240 52 31 chr10 91455905 91456001 -48860764 + LTR67 LTR ERVL 460 557 0 299 228 0 0 chr10 91456167 91456224 -48860541 - MER63 DNA MER1_type -24 1038 982 1271 231 43 0 chr10 91456233 91456489 -48860276 + Tigger7 DNA MER2_type 1 267 -2220 598 157 0 39 chr10 91456488 91456502 -48860263 + Tigger7 DNA MER2_type 2390 2403 -84 * 2293 128 3 60 chr10 91456502 91456870 -48859895 + MER7A DNA MER2_type 2 346 0 598 157 0 39 chr10 91456870 91456957 -48859808 + Tigger7 DNA MER2_type 2403 2487 0 433 246 82 0 chr10 91456958 91457068 -48859697 - MER63 DNA MER1_type -317 745 1 182 288 38 50 chr10 91457280 91457360 -48859405 + L2 LINE L2 3022 3100 -172 342 242 20 30 chr10 91457399 91457498 -48859267 - MIR SINE MIR -10 252 155 253 269 11 54 chr10 91457833 91457926 -48858839 + L2 LINE L2 2976 3064 -208 213 39 0 0 chr10 91458280 91458306 -48858459 + (TG)n Simple_repeat Simple_repeat 2 27 0 660 344 12 8 chr10 91459440 91459690 -48857075 - MIR SINE MIR -7 255 5 1396 167 0 0 chr10 91459844 91460072 -48856693 + AluJo SINE Alu 82 309 -3 233 255 0 0 chr10 91460406 91460457 -48856308 + L2 LINE L2 3263 3313 0 477 241 135 71 chr10 91460887 91461057 -48855708 - MER5A DNA MER1_type 0 189 9 444 33 50 0 chr10 91461714 91461774 -48854991 - L1MB7 LINE L1 -2 6182 6120 228 154 0 26 chr10 91462133 91462172 -48854593 + MER5A DNA MER1_type 9 46 -143 256 202 37 138 chr10 91462807 91462916 -48853849 + MIR SINE MIR 91 188 -74 517 286 102 15 chr10 91462927 91463123 -48853642 - MIR SINE MIR -4 258 46 189 0 0 0 chr10 91465338 91465359 -48851406 + (CA)n Simple_repeat Simple_repeat 2 22 0 226 129 12 59 chr10 91465370 91465455 -48851310 + (TTA)n Simple_repeat Simple_repeat 3 83 0 254 128 26 26 chr10 91465470 91465548 -48851217 + (TAA)n Simple_repeat Simple_repeat 3 80 0 29 70 0 0 chr10 91465548 91465605 -48851160 + AT_rich Low_complexity Low_complexity 1 57 0 2637 61 0 0 chr10 91465768 91466079 -48850686 + AluY SINE Alu 1 311 0 2799 102 11 3 chr10 91467973 91468334 -48848431 + THE1B LTR MaLR 1 364 0 261 309 50 65 chr10 91468669 91468808 -48847957 + MIR3 SINE MIR 57 193 -15 252 0 0 0 chr10 91469292 91469320 -48847445 + (CA)n Simple_repeat Simple_repeat 2 29 0 297 198 314 0 chr10 91470621 91470707 -48846058 - MER81 DNA DNA 0 114 2 270 256 97 70 chr10 91470800 91470948 -48845817 + MIR SINE MIR 4 156 -52 241 321 36 18 chr10 91473560 91473672 -48843093 + MLT1J LTR MaLR 1 114 -397 2388 106 0 0 chr10 91473672 91474003 -48842762 - AluSx SINE Alu 0 331 1 476 336 62 9 chr10 91474003 91474229 -48842536 + MLT1J LTR MaLR 101 338 -173 393 238 12 79 chr10 91474284 91474448 -48842317 - MER104 DNA Tc2 -13 167 15 264 111 0 0 chr10 91475010 91475055 -48841710 + (GA)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 91475100 91475122 -48841643 + AT_rich Low_complexity Low_complexity 1 22 0 1228 120 285 69 chr10 91475285 91475576 -48841189 - THE1B LTR MaLR -1 363 1 264 59 0 0 chr10 91475864 91475898 -48840867 + (TG)n Simple_repeat Simple_repeat 1 34 0 774 291 122 17 chr10 91476096 91476557 -48840208 + MLT1J LTR MaLR 3 511 0 190 244 231 26 chr10 91477326 91477404 -48839361 - MIR SINE MIR -94 114 21 9413 202 44 35 chr10 91477420 91478700 -48838065 - L1MA5 LINE L1 -4 7358 6091 2502 73 0 6 chr10 91478700 91479013 -48837752 - AluY SINE Alu 0 311 1 9413 202 44 35 chr10 91479013 91479661 -48837104 - L1MA5 LINE L1 -1271 6091 5450 797 125 0 0 chr10 91479661 91479781 -48836984 - L1PB1 LINE L1 -5 6146 6027 9413 202 44 35 chr10 91479781 91482028 -48834737 - L1MA5 LINE L1 -1912 5450 3225 2280 110 0 3 chr10 91482028 91482328 -48834437 - AluSc SINE Alu -10 299 1 9413 202 44 35 chr10 91482328 91484594 -48832171 - L1MA5 LINE L1 -4137 3225 1 304 275 33 33 chr10 91484779 91484870 -48831895 - L2 LINE L2 0 3313 3223 291 185 0 0 chr10 91484870 91484924 -48831841 + Alu SINE Alu 247 300 -2 603 322 109 16 chr10 91484926 91485230 -48831535 - L2 LINE L2 -84 3229 2898 618 246 54 88 chr10 91485356 91485596 -48831169 - MIR SINE MIR -26 236 5 1334 256 167 6 chr10 91486845 91487373 -48829392 + MLT1E2 LTR MaLR 14 626 0 352 279 9 0 chr10 91487373 91487484 -48829281 - L1ME LINE L1 -362 5759 5648 195 42 0 0 chr10 91488530 91488554 -48828211 + (TG)n Simple_repeat Simple_repeat 1 24 0 497 260 20 33 chr10 91488734 91488884 -48827881 + MIR SINE MIR 7 154 -108 217 324 0 0 chr10 91489378 91489446 -48827319 + L2 LINE L2 2719 2786 -528 514 323 126 19 chr10 91489631 91489996 -48826769 + MLT1K LTR MaLR 151 554 -34 881 0 57 34 chr10 91492999 91493174 -48823591 + (TA)n Simple_repeat Simple_repeat 2 180 0 330 233 12 12 chr10 91493611 91493697 -48823068 + MLT1I LTR MaLR 324 409 0 2138 133 3 0 chr10 91494010 91494310 -48822455 - AluSx SINE Alu -11 301 1 256 265 0 24 chr10 91495089 91495172 -48821593 + (TATG)n Simple_repeat Simple_repeat 3 83 0 183 184 0 0 chr10 91495473 91495511 -48821254 + GA-rich Low_complexity Low_complexity 4 41 0 392 268 21 10 chr10 91495546 91495643 -48821122 + L2 LINE L2 3173 3270 -2 451 163 10 0 chr10 91497358 91497456 -48819309 - L1MA7 LINE L1 -5 6286 6188 211 197 145 53 chr10 91497733 91497809 -48818956 + MIR SINE MIR 64 146 -62 502 250 56 6 chr10 91498185 91498315 -48818450 + MIR SINE MIR 115 251 -11 197 238 95 16 chr10 91499705 91499768 -48816997 + L2 LINE L2 3186 3253 -60 952 194 26 62 chr10 91500110 91500337 -48816428 - MER20 DNA MER1_type 0 219 1 369 277 201 13 chr10 91500582 91500741 -48816024 + MER5A DNA MER1_type 1 189 0 199 318 0 16 chr10 91501395 91501458 -48815307 + L2 LINE L2 3206 3267 -5 488 226 148 7 chr10 91502405 91502560 -48814205 + MLT1H LTR MaLR 51 227 -322 374 222 22 104 chr10 91502652 91502787 -48813978 + MLT1H LTR MaLR 424 547 -2 357 264 46 11 chr10 91503069 91503156 -48813609 + MIR SINE MIR 64 153 -55 180 243 0 0 chr10 91503179 91503216 -48813549 + L2 LINE L2 3263 3299 -14 1418 187 47 39 chr10 91503569 91503928 -48812837 + MLT1B LTR MaLR 5 366 -24 384 324 41 12 chr10 91503949 91504119 -48812646 - MIR SINE MIR -86 176 2 2112 121 150 3 chr10 91504454 91504827 -48811938 + MSTA LTR MaLR 1 428 0 881 134 140 6 chr10 91505295 91505466 -48811299 - MER20 DNA MER1_type -5 214 21 1738 194 0 0 chr10 91505810 91506089 -48810676 + AluJb SINE Alu 9 287 -25 212 315 92 46 chr10 91506242 91506372 -48810393 - MIR SINE MIR 0 262 127 979 289 107 35 chr10 91507197 91507709 -48809056 + MLT1H1 LTR MaLR 1 549 -6 4088 27 8 0 chr10 91507927 91508411 -48808354 + L1PA4 LINE L1 5666 6153 -2 318 50 0 0 chr10 91509180 91509220 -48807545 + (TG)n Simple_repeat Simple_repeat 2 41 0 * 405 164 0 0 chr10 91509211 91509284 -48807481 + (TA)n Simple_repeat Simple_repeat 2 74 0 334 255 0 43 chr10 91509284 91509378 -48807387 - L1MC4 LINE L1 -1339 6703 6614 534 306 47 6 chr10 91509416 91509586 -48807179 + MER5A DNA MER1_type 7 183 -6 37 0 0 0 chr10 91509647 91509684 -48807081 + AT_rich Low_complexity Low_complexity 1 37 0 270 281 85 0 chr10 91509810 91509892 -48806873 - MIR SINE MIR 0 262 174 518 257 251 16 chr10 91510451 91510638 -48806127 - MIR SINE MIR 0 262 32 358 338 119 5 chr10 91510697 91510898 -48805867 - L2 LINE L2 -1 3312 3089 274 332 80 2 chr10 91510934 91511098 -48805667 - MIR SINE MIR -68 140 16 293 331 31 8 chr10 91512849 91512976 -48803789 + Charlie8 DNA MER1_type 2 131 -2286 1175 218 20 12 chr10 91512976 91513463 -48803302 + L1ME LINE L1 5044 5536 -630 22 35 0 0 chr10 91514256 91514285 -48802480 + AT_rich Low_complexity Low_complexity 1 29 0 353 335 132 9 chr10 91514289 91514516 -48802249 + L1M4 LINE L1 4651 4905 -1241 1847 186 55 31 chr10 91515082 91515538 -48801227 + MLT1C LTR MaLR 1 467 0 429 287 82 31 chr10 91515676 91515871 -48800894 - MIR SINE MIR -24 238 34 371 276 40 13 chr10 91515901 91516053 -48800712 + MARNA DNA Mariner 423 578 -8 709 324 77 34 chr10 91517176 91517884 -48798881 - L2 LINE L2 0 3272 2524 228 290 16 0 chr10 91518403 91518465 -48798300 - L2 LINE L2 -1 3271 3209 693 282 74 40 chr10 91519783 91520162 -48796603 - MLT1K LTR MaLR -8 580 189 614 59 0 0 chr10 91520327 91520412 -48796353 + Alu SINE Alu 220 304 -5 215 299 0 26 chr10 91520460 91520577 -48796188 + T-rich Low_complexity Low_complexity 3 116 0 197 97 16 65 chr10 91521024 91521086 -48795679 + (TTA)n Simple_repeat Simple_repeat 1 59 0 381 278 143 58 chr10 91521097 91521320 -48795445 - MIR SINE MIR 0 262 21 2211 124 7 0 chr10 91521580 91521886 -48794879 - AluSq SINE Alu -5 308 1 1250 309 32 17 chr10 91522152 91522621 -48794144 - MLT1K LTR MaLR -44 544 69 2342 106 3 0 chr10 91523646 91523958 -48792807 + AluSq SINE Alu 1 313 0 215 288 123 0 chr10 91524996 91525069 -48791696 + L2 LINE L2 3229 3310 -3 199 245 0 20 chr10 91525280 91525329 -48791436 + L2 LINE L2 2719 2766 -548 203 265 0 0 chr10 91526471 91526520 -48790245 - L2 LINE L2 0 3313 3265 256 305 24 24 chr10 91526524 91526606 -48790159 - MIR SINE MIR -111 97 16 577 314 29 33 chr10 91526651 91526893 -48789872 - MIR SINE MIR -12 250 10 331 330 10 0 chr10 91527526 91527629 -48789136 + MIR3 SINE MIR 64 167 -41 574 274 11 45 chr10 91527641 91527820 -48788945 - MER117 DNA MER1_type -19 178 6 394 286 67 39 chr10 91528303 91528481 -48788284 + MIR SINE MIR 49 231 -31 431 243 34 67 chr10 91528847 91529060 -48787705 - MIR SINE MIR -38 224 19 1174 201 48 1 chr10 91529986 91530286 -48786479 - MLT1A1 LTR MaLR -4 361 1 445 266 52 23 chr10 91530688 91530861 -48785904 - MIR SINE MIR 0 262 85 1788 188 3 0 chr10 91531320 91531629 -48785136 + AluJo SINE Alu 1 310 -2 243 0 0 0 chr10 91532626 91532653 -48784112 + (T)n Simple_repeat Simple_repeat 1 27 0 977 236 18 14 chr10 91532849 91533069 -48783696 + MER58A DNA MER1_type 4 224 0 273 202 60 24 chr10 91534371 91534455 -48782310 - MLT1I LTR MaLR -322 87 1 253 251 88 96 chr10 91534496 91534859 -48781906 + L2 LINE L2 1823 2182 -1132 180 77 0 0 chr10 91534891 91534917 -48781848 + (CAAT)n Simple_repeat Simple_repeat 4 29 0 235 237 93 0 chr10 91535068 91535165 -48781600 - MLT1L LTR MaLR 0 615 510 2358 201 9 2 chr10 91535385 91535837 -48780928 - L1MB7 LINE L1 -9 6175 5721 350 234 71 78 chr10 91535959 91536100 -48780665 - MLT1L LTR MaLR -457 158 19 214 182 0 0 chr10 91536114 91536158 -48780607 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 521 276 39 60 chr10 91536622 91536854 -48779911 - MIR SINE MIR 0 262 36 2344 149 8 25 chr10 91536986 91537381 -48779384 + MLT1B LTR MaLR 3 390 0 255 140 120 0 chr10 91537381 91537431 -48779334 + MIR3 SINE MIR 110 165 -43 264 30 0 0 chr10 91537829 91537862 -48778903 + (TG)n Simple_repeat Simple_repeat 2 34 0 232 219 0 0 chr10 91538290 91538331 -48778434 + polypyrimidine Low_complexity Low_complexity 2 42 0 830 158 16 0 chr10 91538337 91538464 -48778301 - FLAM_A SINE Alu -4 129 1 629 303 73 4 chr10 91538773 91539007 -48777758 - MIR SINE MIR 0 262 13 1104 176 0 0 chr10 91539390 91539577 -48777188 - MER53 DNA DNA 0 189 3 184 360 56 0 chr10 91540723 91540812 -48775953 - L2 LINE L2 -215 3057 2964 2594 44 0 22 chr10 91540866 91541182 -48775583 + AluY SINE Alu 1 309 -2 817 167 0 0 chr10 91541711 91541843 -48774922 - FRAM SINE Alu -5 171 40 340 153 294 0 chr10 91542571 91542656 -48774109 - L2 LINE L2 0 3313 3204 396 184 18 18 chr10 91543107 91543216 -48773549 + CT-rich Low_complexity Low_complexity 2 110 0 27 0 0 0 chr10 91543423 91543450 -48773315 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr10 91546290 91546314 -48770451 + AT_rich Low_complexity Low_complexity 1 24 0 302 323 29 76 chr10 91546378 91546694 -48770071 + L2 LINE L2 2374 2674 -640 364 288 161 41 chr10 91546801 91547486 -48769279 - L1M4 LINE L1 -2196 3950 3184 2232 86 14 0 chr10 91548552 91548866 -48767899 + AluSp SINE Alu 1 318 0 380 279 21 36 chr10 91548934 91549074 -48767691 + MIR SINE MIR 120 257 -5 210 71 0 0 chr10 91550578 91550606 -48766159 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 214 27 0 54 chr10 91551511 91551548 -48765217 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 208 273 146 24 chr10 91552935 91553100 -48763665 - L2 LINE L2 -371 2943 2759 * 245 352 112 26 chr10 91553092 91553325 -48763440 - L2 LINE L2 -123 3149 2897 * 730 206 121 45 chr10 91553315 91553516 -48763249 + MIR SINE MIR 17 238 -24 2116 206 51 28 chr10 91553516 91554010 -48762755 + MLT1D LTR MaLR 1 505 0 730 206 121 45 chr10 91554010 91554031 -48762734 + MIR SINE MIR 238 256 -6 398 229 57 29 chr10 91554228 91554333 -48762432 - LTR67 LTR ERVL -22 535 428 214 200 20 20 chr10 91554692 91554742 -48762023 + MIR SINE MIR 104 153 -109 192 299 103 23 chr10 91554791 91554878 -48761887 + L2 LINE L2 2922 3015 -257 703 286 131 26 chr10 91554902 91555290 -48761475 + LTR33A LTR ERVL 11 439 -84 2157 242 81 13 chr10 91555292 91555834 -48760931 - MLT1G LTR MaLR -2 588 10 301 343 84 56 chr10 91555925 91556176 -48760589 + L2 LINE L2 3015 3272 0 705 239 74 78 chr10 91556292 91556601 -48760164 - MER102b DNA MER1_type 0 341 34 206 167 83 50 chr10 91557160 91557220 -48759545 + L2 LINE L2 3208 3269 -3 228 205 144 0 chr10 91557256 91557318 -48759447 + MIR SINE MIR 84 154 -54 440 294 80 43 chr10 91558416 91558692 -48758073 + L2 LINE L2 2968 3253 -19 310 148 49 0 chr10 91560476 91560537 -48756228 + MLT1K LTR MaLR 522 585 -3 298 330 9 28 chr10 91560631 91560737 -48756028 - MIR SINE MIR -146 116 13 186 278 130 46 chr10 91561183 91561291 -48755474 - L2 LINE L2 0 3313 3197 183 200 0 0 chr10 91563946 91563986 -48752779 + MIR SINE MIR 96 135 -73 496 296 21 37 chr10 91564258 91564444 -48752321 + MIR SINE MIR 30 213 -49 199 354 61 10 chr10 91564518 91564617 -48752148 - MIR SINE MIR -60 148 45 2224 103 7 0 chr10 91565628 91565928 -48750837 - AluSc SINE Alu -7 302 1 453 326 47 42 chr10 91566225 91566461 -48750304 - MIR SINE MIR -14 248 12 194 224 86 0 chr10 91567115 91567173 -48749592 + MIR SINE MIR 44 106 -156 555 204 53 0 chr10 91567217 91567330 -48749435 - MLT1I LTR MaLR -6 403 285 494 172 0 35 chr10 91567430 91567517 -48749248 - MLT1I LTR MaLR -253 156 73 310 300 71 14 chr10 91567829 91567969 -48748796 - L2 LINE L2 -220 3052 2905 181 348 146 0 chr10 91568213 91568302 -48748463 + MIR3 SINE MIR 77 178 -30 312 214 45 56 chr10 91568860 91568949 -48747816 + MIR SINE MIR 83 170 -92 255 61 0 0 chr10 91569004 91569037 -48747728 + (TAA)n Simple_repeat Simple_repeat 1 33 0 576 197 27 106 chr10 91569332 91569520 -48747245 + MER69A DNA AcHobo 1 173 -4 557 289 0 7 chr10 91569553 91569688 -48747077 + MIR SINE MIR 17 150 -112 198 0 0 0 chr10 91569695 91569717 -48747048 + (TTC)n Simple_repeat Simple_repeat 2 23 0 6625 146 6 21 chr10 91569717 91571683 -48745082 - L1PB1 LINE L1 -4 6147 4214 350 21 21 0 chr10 91572581 91572628 -48744137 + (CA)n Simple_repeat Simple_repeat 2 49 0 631 310 70 19 chr10 91572785 91573043 -48743722 + LTR16B LTR ERVL 194 464 0 1725 187 7 0 chr10 91573172 91573472 -48743293 + AluJo SINE Alu 1 302 -10 421 321 22 27 chr10 91574061 91574245 -48742520 - MER20 DNA MER1_type -1 218 36 667 237 153 89 chr10 91574435 91574861 -48741904 - MLT1K LTR MaLR -51 537 85 1095 154 0 0 chr10 91575716 91575891 -48740874 - AluSg/x SINE Alu -2 310 136 189 260 41 55 chr10 91576460 91576533 -48740232 + L2 LINE L2 3187 3258 -14 458 243 109 59 chr10 91578098 91578300 -48738465 + MER112 DNA MER1_type 40 251 -9 293 330 57 9 chr10 91578308 91578414 -48738351 - MER5A DNA MER1_type -16 173 63 309 333 44 18 chr10 91578433 91578547 -48738218 + L2 LINE L2 3156 3272 0 187 244 24 0 chr10 91578686 91578727 -48738038 - L3 LINE CR1 -12 1565 1524 330 242 60 63 chr10 91578745 91578914 -48737851 - MER5A DNA MER1_type -11 167 1 456 275 96 11 chr10 91578952 91579130 -48737635 - L3 LINE CR1 -99 1478 1286 736 303 59 30 chr10 91579152 91579676 -48737089 - L1ME4a LINE L1 -48 6073 5535 4064 155 16 7 chr10 91580052 91580787 -48735978 - L1MB3 LINE L1 -1 6182 5441 26 50 0 0 chr10 91581203 91581243 -48735522 + AT_rich Low_complexity Low_complexity 1 40 0 501 326 15 8 chr10 91581279 91581537 -48735228 + L1ME3A LINE L1 5633 5894 -276 1657 196 10 7 chr10 91581652 91581958 -48734807 + AluJo SINE Alu 1 307 -5 500 325 115 46 chr10 91582288 91582869 -48733896 - L1ME4a LINE L1 -1111 5035 4496 3979 52 2 6 chr10 91582869 91583370 -48733395 + L1PA6 LINE L1 5656 6154 0 500 325 115 46 chr10 91583370 91583828 -48732937 - L1ME4a LINE L1 -1650 4496 3915 250 137 0 78 chr10 91584812 91584863 -48731902 - L2 LINE L2 0 3272 3226 609 271 33 33 chr10 91585217 91585431 -48731334 - MIR SINE MIR 0 262 49 637 278 103 5 chr10 91586031 91586254 -48730511 - MIR SINE MIR -13 249 5 1089 191 11 0 chr10 91586428 91586616 -48730149 - MER58A DNA MER1_type 0 224 35 269 345 0 8 chr10 91587758 91587877 -48728888 + GA-rich Low_complexity Low_complexity 3 120 0 263 238 0 83 chr10 91588270 91588354 -48728411 + MIR SINE MIR 112 188 -74 378 0 0 0 chr10 91588363 91588405 -48728360 + (CA)n Simple_repeat Simple_repeat 2 43 0 2504 125 15 5 chr10 91589449 91589849 -48726916 + L1PA13 LINE L1 5755 6158 -5 1835 173 37 6 chr10 91591671 91592024 -48724741 + MLT1A1 LTR MaLR 2 365 0 229 295 85 31 chr10 91592063 91592192 -48724573 - L2 LINE L2 -1 3271 3136 227 269 43 54 chr10 91592454 91592547 -48724218 + MER91B DNA MER1_type 33 124 -66 1720 156 44 30 chr10 91592674 91592969 -48723796 - AluJo SINE Alu -13 299 1 2015 141 29 35 chr10 91593439 91593814 -48722951 - THE1C LTR MaLR 0 375 3 712 284 47 19 chr10 91594008 91594223 -48722542 - MIR SINE MIR -10 252 32 207 222 56 0 chr10 91594355 91594409 -48722356 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 531 328 58 72 chr10 91595158 91595591 -48721174 + L2 LINE L2 2835 3261 -11 358 210 0 12 chr10 91595802 91595883 -48720882 - MER116 DNA Mariner 0 80 1 1656 222 142 43 chr10 91596370 91596956 -48719809 - HsTC2a DNA Tc2 0 744 101 566 253 14 0 chr10 91597377 91597523 -48719242 - MER117 DNA MER1_type -49 148 1 2211 105 6 29 chr10 91598642 91598957 -48717808 + AluSc SINE Alu 1 308 -1 254 348 65 0 chr10 91600571 91600663 -48716102 + L2 LINE L2 3175 3272 0 2962 236 45 34 chr10 91602566 91603353 -48713412 - L1ME1 LINE L1 -22 6144 5350 3908 174 32 19 chr10 91603396 91604906 -48711859 - L1MB5 LINE L1 -192 5982 4439 1432 186 12 63 chr10 91604918 91605221 -48711544 - L1ME1 LINE L1 -777 5369 5093 2102 117 0 13 chr10 91605221 91605519 -48711246 + AluSx SINE Alu 2 295 -17 1432 186 12 63 chr10 91605519 91605640 -48711125 - L1ME1 LINE L1 -1053 5093 4967 202 227 80 68 chr10 91605731 91605819 -48710946 + MIR SINE MIR 124 212 -50 486 345 65 0 chr10 91605934 91606134 -48710631 + MIR SINE MIR 2 214 -48 357 355 96 70 chr10 91606274 91606660 -48710105 + L2 LINE L2 2872 3267 -5 396 286 43 25 chr10 91607888 91608049 -48708716 - MIR SINE MIR -10 252 89 497 300 126 58 chr10 91608229 91608712 -48708053 + MARNA DNA Mariner 63 578 -8 3646 233 93 45 chr10 91608759 91609474 -48707291 + L1PA13 LINE L1 1 785 -6002 216 0 0 0 chr10 91609474 91609498 -48707267 + (CTTTG)n Simple_repeat Simple_repeat 5 28 0 3646 233 93 45 chr10 91609498 91609841 -48706924 + L1PA13 LINE L1 785 1110 -5677 20366 165 27 13 chr10 91609853 91615179 -48701586 + L1PA13 LINE L1 1397 6814 0 1667 153 21 17 chr10 91615813 91616100 -48700665 + AluJb SINE Alu 1 288 -24 1695 161 3 39 chr10 91616403 91616713 -48700052 + AluJo SINE Alu 14 312 0 250 264 0 56 chr10 91617576 91617648 -48699117 + L2 LINE L2 3205 3272 0 2023 171 91 44 chr10 91617928 91618403 -48698362 + MLT1D LTR MaLR 1 497 -8 236 324 63 18 chr10 91618448 91618559 -48698206 + MIR SINE MIR 61 176 -86 560 135 0 58 chr10 91618639 91618743 -48698022 - L1MC1 LINE L1 0 6333 6236 201 311 111 15 chr10 91620806 91620941 -48695824 + L2 LINE L2 3153 3300 -13 185 298 143 12 chr10 91621575 91621659 -48695106 + MIR SINE MIR 69 163 -99 385 319 8 0 chr10 91621672 91621791 -48694974 + MIR SINE MIR 139 258 -4 441 308 57 43 chr10 91623064 91623275 -48693490 + MIR SINE MIR 29 242 -20 458 184 44 35 chr10 91623434 91623548 -48693217 - L1MB3 LINE L1 0 6183 6069 351 410 52 40 chr10 91623555 91624075 -48692690 + L1PBb LINE L1 6 531 -6318 262 364 8 45 chr10 91624244 91624491 -48692274 + L1PBb LINE L1 767 1004 -5845 322 281 91 28 chr10 91624621 91624924 -48691841 + L1PBb LINE L1 1003 1563 -5285 7889 219 31 19 chr10 91624935 91628253 -48688512 + L1PA16 LINE L1 725 4217 -2006 1625 148 107 23 chr10 91628253 91628598 -48688167 + THE1C LTR MaLR 2 375 0 7889 219 31 19 chr10 91628598 91630605 -48686160 + L1PA16 LINE L1 4217 6199 -24 3738 134 22 16 chr10 91630617 91631252 -48685513 - L1MB3 LINE L1 -100 6083 5445 2224 140 5 31 chr10 91631639 91632024 -48684741 + THE1C LTR MaLR 1 375 0 3314 99 11 78 chr10 91632024 91632591 -48684174 + THE1C-int LTR MaLR 1 529 -1051 * 3996 108 2 16 chr10 91632581 91633148 -48683617 + THE1C-int LTR MaLR 1022 1580 0 2157 148 8 26 chr10 91633148 91633526 -48683239 + THE1C LTR MaLR 1 371 -4 276 30 0 0 chr10 91633631 91633664 -48683101 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1002 85 8 0 chr10 91633666 91633795 -48682970 - AluSq/x SINE Alu -182 130 1 2041 142 3 7 chr10 91633797 91634100 -48682665 - AluSx SINE Alu -10 302 1 234 277 96 0 chr10 91634187 91634270 -48682495 - L1MEd LINE L1 -3576 2553 2463 862 287 27 55 chr10 91634724 91634963 -48681802 - L1MEd LINE L1 -4642 1668 1424 1578 161 104 0 chr10 91634963 91635242 -48681523 - AluJo SINE Alu -4 308 1 862 287 27 55 chr10 91635242 91635959 -48680806 - L1MEd LINE L1 -4886 1424 707 201 39 0 0 chr10 91635961 91635987 -48680778 + (TA)n Simple_repeat Simple_repeat 2 27 0 331 173 10 115 chr10 91635987 91636091 -48680674 - L1MC4 LINE L1 -1337 6705 6613 315 277 77 23 chr10 91636094 91636224 -48680541 - L1MEd LINE L1 -5422 697 561 383 375 70 0 chr10 91636319 91636519 -48680246 + L1M4 LINE L1 3978 4191 -1955 329 297 164 17 chr10 91636651 91636944 -48679821 + L1M4 LINE L1 4622 4957 -1189 763 281 181 17 chr10 91639271 91639572 -48677193 - L1MC4a LINE L1 -1762 6046 5796 1840 209 3 11 chr10 91639572 91639940 -48676825 + MLT1A1 LTR MaLR 1 365 0 763 281 181 17 chr10 91639940 91640212 -48676553 - L1MC4a LINE L1 -2012 5796 5379 290 253 131 30 chr10 91640268 91640367 -48676398 + MIR SINE MIR 148 256 -6 1866 173 0 6 chr10 91641097 91641410 -48675355 - AluJo SINE Alu -1 311 1 706 269 170 61 chr10 91643209 91643704 -48673061 + MLT1K LTR MaLR 23 571 -17 216 191 0 24 chr10 91643776 91643818 -48672947 + CT-rich Low_complexity Low_complexity 1 41 0 277 283 54 11 chr10 91643907 91643999 -48672766 + MIR3 SINE MIR 107 202 -6 2330 65 10 3 chr10 91644644 91644951 -48671814 - AluY SINE Alu -2 309 1 637 231 22 0 chr10 91645392 91645526 -48671239 + MIR SINE MIR 100 236 -26 214 278 120 83 chr10 91646636 91646671 -48670094 + L2 LINE L2 3175 3207 -106 2408 81 3 0 chr10 91646671 91646969 -48669796 + AluSg SINE Alu 1 299 -11 2194 84 4 0 chr10 91646969 91647244 -48669521 + AluSp SINE Alu 32 307 -6 214 278 120 83 chr10 91647244 91647340 -48669425 + L2 LINE L2 3206 3312 -1 311 67 22 0 chr10 91647902 91647947 -48668818 + MADE1 DNA Mariner 1 46 -34 773 295 161 34 chr10 91648360 91648736 -48668029 - L2 LINE L2 -4 3309 2982 1065 157 98 0 chr10 91648736 91648940 -48667825 + MER58A DNA MER1_type 1 224 0 773 295 161 34 chr10 91648940 91649390 -48667375 - L2 LINE L2 -331 2982 2332 464 322 70 19 chr10 91651520 91651679 -48665086 - MIR SINE MIR -12 250 76 461 163 0 0 chr10 91651679 91651759 -48665006 + MER116 DNA Mariner 1 80 0 464 322 70 19 chr10 91651759 91651813 -48664952 - MIR SINE MIR -186 76 26 190 260 110 0 chr10 91652803 91652876 -48663889 + L3b LINE CR1 1347 1427 -156 329 253 211 0 chr10 91654905 91655000 -48661765 + L2 LINE L2 3186 3300 -13 552 186 23 54 chr10 91655362 91655491 -48661274 - AluSq/x SINE Alu -186 127 3 27 29 0 0 chr10 91655558 91655592 -48661173 + AT_rich Low_complexity Low_complexity 1 34 0 280 164 30 0 chr10 91655594 91655661 -48661104 + (TA)n Simple_repeat Simple_repeat 2 70 0 223 172 17 52 chr10 91655979 91656037 -48660728 + CT-rich Low_complexity Low_complexity 2 57 0 40761 61 8 5 chr10 91656130 91662258 -48654507 - L1PA5 LINE L1 -8 6146 2 486 256 126 47 chr10 91663032 91663223 -48653542 - MIR SINE MIR -25 237 32 273 367 29 0 chr10 91663305 91663444 -48653321 - MER117 DNA MER1_type -51 146 4 1182 284 40 21 chr10 91663493 91663916 -48652849 + MLT1J1 LTR MaLR 3 433 -13 386 260 87 0 chr10 91664318 91664468 -48652297 + MER103 DNA DNA 3 165 -1 1966 129 10 10 chr10 91664922 91665224 -48651541 + AluSq SINE Alu 1 302 -11 23 33 0 0 chr10 91665573 91665603 -48651162 + AT_rich Low_complexity Low_complexity 1 30 0 667 331 30 8 chr10 91666047 91666310 -48650455 + MLT1L LTR MaLR 8 276 -339 1761 119 0 12 chr10 91666337 91666588 -48650177 - AluSg SINE Alu -24 286 39 344 328 31 31 chr10 91666717 91666823 -48649942 + MLT1L LTR MaLR 422 530 -85 1589 186 34 52 chr10 91666823 91667204 -48649561 - MLT1A2 LTR MaLR 0 374 1 344 328 31 31 chr10 91667204 91667289 -48649476 + MLT1L LTR MaLR 529 613 -2 287 305 70 23 chr10 91668935 91669063 -48647702 - MIR SINE MIR -12 250 117 1377 84 15 5 chr10 91669092 91669294 -48647471 + L1PA11 LINE L1 5950 6153 -21 198 103 0 0 chr10 91669320 91669349 -48647416 + (CA)n Simple_repeat Simple_repeat 2 30 0 685 276 85 1 chr10 91669613 91669831 -48646934 + MIR SINE MIR 16 249 -13 267 298 193 9 chr10 91670302 91670416 -48646349 - MIR SINE MIR -70 192 58 306 0 0 0 chr10 91671409 91671443 -48645322 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 91671496 91671517 -48645248 + AT_rich Low_complexity Low_complexity 1 21 0 247 250 17 0 chr10 91671646 91671706 -48645059 + GA-rich Low_complexity Low_complexity 1 61 0 195 100 0 0 chr10 91671857 91671887 -48644878 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 712 209 77 43 chr10 91671887 91672122 -48644643 - L2 LINE L2 -38 3275 3033 444 310 76 10 chr10 91672119 91672316 -48644449 - L2 LINE L2 -537 2777 2568 * 216 111 0 0 chr10 91672333 91672369 -48644396 + (TG)n Simple_repeat Simple_repeat 2 37 0 1511 152 49 150 chr10 91672377 91672929 -48643836 + LTR54B LTR ERV1 3 498 0 22 0 0 0 chr10 91672951 91672973 -48643792 + AT_rich Low_complexity Low_complexity 1 22 0 2714 217 121 21 chr10 91672974 91674057 -48642708 - L1ME3A LINE L1 -4 6166 4984 305 254 109 9 chr10 91674205 91674315 -48642450 + L2 LINE L2 3189 3309 -4 552 277 209 13 chr10 91674518 91674960 -48641805 - L1MC/D LINE L1 -303 5818 5304 21 36 0 0 chr10 91675004 91675032 -48641733 + AT_rich Low_complexity Low_complexity 1 28 0 1308 238 75 42 chr10 91675139 91675573 -48641192 + LTR33 LTR ERVL 1 456 -65 2011 124 7 24 chr10 91675573 91675871 -48640894 - AluSx SINE Alu -19 293 1 1308 238 75 42 chr10 91675871 91675940 -48640825 + LTR33 LTR ERVL 456 521 0 758 266 60 10 chr10 91676928 91677127 -48639638 + MIR SINE MIR 31 239 -23 180 0 0 0 chr10 91677330 91677350 -48639415 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 188 323 16 0 chr10 91678513 91678575 -48638190 - L2 LINE L2 0 3313 3251 22 0 0 0 chr10 91679385 91679407 -48637358 + AT_rich Low_complexity Low_complexity 1 22 0 232 290 130 25 chr10 91679830 91679992 -48636773 + MIR SINE MIR 84 262 0 713 220 98 56 chr10 91681595 91682185 -48634580 - LTR48 LTR ERV1 0 787 9 246 62 0 0 chr10 91683114 91683146 -48633619 + (CA)n Simple_repeat Simple_repeat 1 32 0 6607 128 62 15 chr10 91683259 91684141 -48632624 - Tigger3b DNA MER2_type -1813 1215 263 3437 122 42 57 chr10 91684141 91684804 -48631961 + MER39B LTR ERV1 1 653 0 6607 128 62 15 chr10 91684804 91685079 -48631686 - Tigger3b DNA MER2_type -2765 263 3 817 244 87 51 chr10 91685380 91685449 -48631316 - L1MC/D LINE L1 -724 5450 5385 1387 238 128 42 chr10 91685449 91685995 -48630770 + MLT1G1 LTR MaLR 3 595 0 817 244 87 51 chr10 91685995 91686242 -48630523 - L1MC/D LINE L1 -789 5385 5148 2376 63 0 38 chr10 91686242 91686561 -48630204 - AluY SINE Alu -4 307 1 817 244 87 51 chr10 91686561 91687348 -48629417 - L1MC/D LINE L1 -1026 5148 4310 26 64 0 0 chr10 91687359 91687406 -48629359 + AT_rich Low_complexity Low_complexity 1 47 0 11112 188 23 20 chr10 91687662 91690074 -48626691 + Cheshire DNA MER1_type 1 2420 0 475 161 31 151 chr10 91690157 91690349 -48626416 - MIR SINE MIR -14 248 80 443 324 67 6 chr10 91690352 91690531 -48626234 + MIR SINE MIR 29 218 -44 592 296 42 25 chr10 91690779 91691019 -48625746 + MIR SINE MIR 13 256 -6 542 187 6 115 chr10 91691169 91691351 -48625414 - MER53 DNA DNA -26 163 2 198 0 0 0 chr10 91693395 91693417 -48623348 + (A)n Simple_repeat Simple_repeat 1 22 0 220 187 0 0 chr10 91693548 91693595 -48623170 - MIR SINE MIR -88 120 73 594 293 187 46 chr10 91693908 91694788 -48621977 + L2 LINE L2 2302 3313 0 1802 230 123 49 chr10 91696552 91697169 -48619596 + MER20B DNA MER1_type 1 678 -105 2254 92 0 3 chr10 91697169 91697462 -48619303 + AluSc SINE Alu 1 292 -17 1802 230 123 49 chr10 91697462 91697553 -48619212 + MER20B DNA MER1_type 678 761 -22 6578 202 53 60 chr10 91697559 91698707 -48618058 + L1MB7 LINE L1 13 1166 -5478 13592 26 1 0 chr10 91698707 91701096 -48615669 + L1PA4 LINE L1 3768 6152 -3 6578 202 53 60 chr10 91701096 91703553 -48613212 + L1MB7 LINE L1 1166 3679 -2965 1721 192 13 11 chr10 91703557 91703938 -48612827 + L1MB7 LINE L1 5069 5450 -1194 2724 212 15 6 chr10 91703957 91704494 -48612271 - MER74A LTR ERVL -16 542 1 4470 168 61 14 chr10 91704504 91705651 -48611114 + L1MB7 LINE L1 5460 6663 -19 1539 220 89 30 chr10 91705696 91706124 -48610641 - MLT1D LTR MaLR -40 465 13 25 75 0 0 chr10 91706819 91706872 -48609893 + AT_rich Low_complexity Low_complexity 1 53 0 365 245 10 20 chr10 91708433 91708531 -48608234 + HAL1b LINE L1 362 458 -890 1457 208 130 93 chr10 91708728 91709552 -48607213 + L1MC5 LINE L1 7090 7943 -18 1501 199 3 32 chr10 91709646 91709962 -48606803 + AluJo SINE Alu 1 307 -5 441 336 15 8 chr10 91710139 91710273 -48606492 + MIR SINE MIR 17 151 -57 341 307 196 30 chr10 91710749 91711045 -48605720 + L3b LINE CR1 1180 1524 -59 5773 147 48 12 chr10 91711226 91712448 -48604317 - L1PBa LINE L1 -3632 3230 1956 4405 106 9 0 chr10 91712461 91713096 -48603669 + L1PB1 LINE L1 5507 6147 -4 33 0 0 0 chr10 91713349 91713382 -48603383 + AT_rich Low_complexity Low_complexity 1 33 0 775 242 142 11 chr10 91714218 91714528 -48602237 + MLT1A1 LTR MaLR 1 369 -5 1113 212 18 5 chr10 91715791 91716008 -48600757 - MER58A DNA MER1_type -4 220 1 22 80 0 0 chr10 91716096 91716146 -48600619 + AT_rich Low_complexity Low_complexity 1 50 0 249 304 113 28 chr10 91716536 91716653 -48600112 + MIR SINE MIR 26 152 -56 358 371 116 19 chr10 91717488 91718128 -48598637 - L2 LINE L2 -11 3261 2550 250 228 167 80 chr10 91718167 91718329 -48598436 - MIR SINE MIR -29 233 58 338 219 31 0 chr10 91718726 91718790 -48597975 + L2 LINE L2 3247 3312 -1 216 274 137 29 chr10 91719249 91719351 -48597414 - L2 LINE L2 0 3313 3201 812 259 21 0 chr10 91721466 91721655 -48595110 + MIR SINE MIR 68 260 -2 22 56 0 0 chr10 91722097 91722133 -48594632 + AT_rich Low_complexity Low_complexity 1 36 0 200 59 29 0 chr10 91722133 91722167 -48594598 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2231 86 4 0 chr10 91722167 91722447 -48594318 - AluSp SINE Alu -32 281 1 22 0 0 0 chr10 91723976 91723998 -48592767 + AT_rich Low_complexity Low_complexity 1 22 0 262 345 70 19 chr10 91724069 91724296 -48592469 - MIR3 SINE MIR -26 236 5 1989 118 0 17 chr10 91725617 91725977 -48590788 + AluSq SINE Alu 1 355 0 1216 265 164 9 chr10 91726242 91726676 -48590089 - MLT1D LTR MaLR -4 501 1 1410 171 52 25 chr10 91728657 91728943 -48587822 - AluJo SINE Alu -18 294 1 295 235 143 17 chr10 91729782 91729901 -48586864 + MIR SINE MIR 1 134 -128 406 287 121 40 chr10 91729923 91730146 -48586619 + L2 LINE L2 3073 3313 0 328 289 127 54 chr10 91731968 91732134 -48584631 - L2 LINE L2 -1 3271 3094 610 246 131 5 chr10 91732480 91732671 -48584094 - MIR SINE MIR 0 262 48 197 228 70 18 chr10 91732957 91733014 -48583751 - MIR SINE MIR -102 160 101 292 337 133 0 chr10 91733649 91733815 -48582950 - MIR SINE MIR -14 248 61 569 276 26 18 chr10 91735006 91735206 -48581559 + MIR SINE MIR 3 206 -56 8826 223 45 29 chr10 91735416 91738547 -48578218 - L1MEc LINE L1 -999 5216 2069 205 376 23 23 chr10 91739219 91739352 -48577413 + MIR3 SINE MIR 3 135 -73 329 295 29 36 chr10 91740405 91740544 -48576221 + MIR SINE MIR 68 205 -57 311 269 15 46 chr10 91741605 91741735 -48575030 + MIR SINE MIR 137 262 0 23 0 0 0 chr10 91741800 91741823 -48574942 + AT_rich Low_complexity Low_complexity 1 23 0 1165 308 41 33 chr10 91743444 91743738 -48573027 + MLT1L LTR MaLR 1 291 -324 2429 77 17 0 chr10 91743738 91744038 -48572727 + AluSp SINE Alu 1 305 -8 1165 308 41 33 chr10 91744038 91744350 -48572415 + MLT1L LTR MaLR 291 612 -3 228 207 69 0 chr10 91744774 91744832 -48571933 + LTR67 LTR ERVL 483 544 -13 454 303 114 11 chr10 91745509 91745684 -48571081 - MIR3 SINE MIR -6 202 10 364 333 79 67 chr10 91745727 91745967 -48570798 + L2 LINE L2 2954 3196 -76 328 311 63 50 chr10 91746303 91746602 -48570163 - MLT1L LTR MaLR 0 615 313 263 355 113 19 chr10 91748528 91748953 -48567812 + L2 LINE L2 2034 2498 -816 202 284 40 40 chr10 91749117 91749191 -48567574 + L2 LINE L2 2670 2743 -571 24239 71 4 2 chr10 91749233 91752584 -48564181 + L1PA5 LINE L1 11 3365 -2781 13432 49 11 0 chr10 91752584 91755076 -48561689 + L1PA5 LINE L1 3667 6175 0 291 360 125 47 chr10 91755136 91755480 -48561285 + L2 LINE L2 2824 3194 -78 26 64 0 0 chr10 91755680 91755727 -48561038 + AT_rich Low_complexity Low_complexity 1 47 0 399 362 53 5 chr10 91757779 91757967 -48558798 + MIR SINE MIR 7 203 -59 334 300 92 8 chr10 91757991 91758111 -48558654 + MIR SINE MIR 20 149 -113 1083 294 43 17 chr10 91759088 91759506 -48557259 + LTR16A LTR ERVL 22 450 0 518 333 139 16 chr10 91759840 91760227 -48556538 - L2 LINE L2 -1026 2288 1854 260 261 11 176 chr10 91760818 91761079 -48555686 - L2 LINE L2 -1 3271 3054 223 315 15 96 chr10 91761175 91761301 -48555464 - L3b LINE CR1 -120 1463 1357 2470 77 0 0 chr10 91761301 91761599 -48555166 - AluY SINE Alu -13 298 1 223 315 15 96 chr10 91761599 91761669 -48555096 - L3b LINE CR1 -226 1357 1283 234 0 0 0 chr10 91761720 91761746 -48555019 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 35 78 0 0 chr10 91762197 91762274 -48554491 + AT_rich Low_complexity Low_complexity 1 77 0 229 269 0 0 chr10 91762394 91762446 -48554319 - MIR SINE MIR -110 98 47 189 107 0 0 chr10 91764826 91764854 -48551911 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 201 74 0 0 chr10 91764984 91765011 -48551754 + (T)n Simple_repeat Simple_repeat 1 27 0 273 320 92 7 chr10 91765888 91766041 -48550724 - MIR SINE MIR -3 259 94 585 276 147 32 chr10 91766237 91766577 -48550188 + L2 LINE L2 2935 3313 0 1195 68 25 0 chr10 91768107 91768268 -48548497 - L1MA3 LINE L1 -1 6304 6140 269 298 14 176 chr10 91768343 91768622 -48548143 - L2 LINE L2 -1 3271 3038 2251 188 40 0 chr10 91769011 91769432 -48547333 + MLT1C LTR MaLR 30 467 0 237 146 0 0 chr10 91769704 91769752 -48547013 + (TG)n Simple_repeat Simple_repeat 1 48 0 281 321 25 0 chr10 91769898 91769979 -48546786 + MIR SINE MIR 19 101 -107 544 265 221 5 chr10 91770824 91771028 -48545737 + MIR SINE MIR 5 252 -10 356 254 104 15 chr10 91771211 91771345 -48545420 - L2 LINE L2 0 3313 3168 654 191 9 0 chr10 91772205 91772315 -48544450 + FLAM_C SINE Alu 13 123 -20 22 0 0 0 chr10 91773179 91773201 -48543564 + AT_rich Low_complexity Low_complexity 1 22 0 674 215 92 0 chr10 91773513 91773676 -48543089 - MER5B DNA MER1_type 0 178 1 557 220 207 7 chr10 91773690 91773840 -48542925 + MER5A DNA MER1_type 10 189 0 436 211 66 30 chr10 91774758 91774924 -48541841 + L1ME4a LINE L1 5695 5866 -255 278 339 55 0 chr10 91775145 91775272 -48541493 + MLT1K LTR MaLR 132 265 -323 210 171 0 0 chr10 91775567 91775602 -48541163 + T-rich Low_complexity Low_complexity 1 35 0 357 24 0 0 chr10 91775706 91775748 -48541017 + (TG)n Simple_repeat Simple_repeat 1 42 0 263 136 12 37 chr10 91775792 91775873 -48540892 + (TA)n Simple_repeat Simple_repeat 2 80 0 989 59 0 7 chr10 91776049 91776184 -48540581 - L1PA15 LINE L1 -3 6162 6029 766 84 0 0 chr10 91776184 91776291 -48540474 + L1P4 LINE L1 5681 5787 -378 303 288 98 78 chr10 91776406 91776501 -48540264 - L1MC4a LINE L1 -1818 5990 5898 2461 81 0 0 chr10 91776501 91776798 -48539967 - AluSg SINE Alu -13 297 1 303 288 98 78 chr10 91776798 91776907 -48539858 - L1MC4a LINE L1 -1910 5898 5782 223 258 195 16 chr10 91776935 91777063 -48539702 + MIR SINE MIR 100 250 -12 351 301 44 13 chr10 91777125 91777334 -48539431 - L1MC4a LINE L1 -602 5757 5530 2393 227 31 40 chr10 91777452 91778056 -48538709 - MER77 LTR ERV1 -1 604 6 198 271 0 0 chr10 91778534 91778582 -48538183 - L2 LINE L2 0 3313 3266 358 315 56 22 chr10 91778587 91778765 -48538000 + MER5A DNA MER1_type 6 189 0 2044 148 30 0 chr10 91778809 91779146 -48537619 - MER7A DNA MER2_type -1 345 1 189 0 0 0 chr10 91779310 91779331 -48537434 + (CA)n Simple_repeat Simple_repeat 2 22 0 325 300 22 56 chr10 91780215 91780395 -48536370 - MER20 DNA MER1_type -17 202 29 529 298 83 9 chr10 91780508 91780736 -48536029 + MIR SINE MIR 14 258 -4 389 235 92 0 chr10 91782218 91782316 -48534449 - MER5C DNA MER1_type -203 121 15 23 0 0 0 chr10 91782801 91782824 -48533941 + AT_rich Low_complexity Low_complexity 1 23 0 218 281 24 0 chr10 91783187 91783269 -48533496 + (ATG)n Simple_repeat Simple_repeat 3 86 0 454 350 6 0 chr10 91783295 91783472 -48533293 + (ATG)n Simple_repeat Simple_repeat 3 180 0 594 340 21 13 chr10 91783532 91783770 -48532995 - MIR SINE MIR -17 245 6 494 80 60 10 chr10 91784717 91784817 -48531948 + CT-rich Low_complexity Low_complexity 1 105 0 466 171 342 0 chr10 91784829 91784946 -48531819 + MIR SINE MIR 35 191 -71 261 294 12 0 chr10 91785305 91785390 -48531375 + MIR SINE MIR 121 206 -56 207 0 0 0 chr10 91785442 91785465 -48531300 + (CAT)n Simple_repeat Simple_repeat 2 24 0 216 97 0 0 chr10 91785659 91785690 -48531075 + (T)n Simple_repeat Simple_repeat 1 31 0 2234 101 3 3 chr10 91786307 91786603 -48530162 - AluSp SINE Alu -17 296 1 354 61 0 0 chr10 91786661 91786710 -48530055 + (TG)n Simple_repeat Simple_repeat 2 50 0 15208 135 7 8 chr10 91786867 91789347 -48527418 + L1PA8 LINE L1 1450 3926 -2220 41474 53 3 25 chr10 91789355 91795628 -48521137 + L1PA5 LINE L1 11 6139 -15 216 0 0 0 chr10 91795628 91795652 -48521113 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 91795651 91795689 -48521076 + (TG)n Simple_repeat Simple_repeat 1 38 0 9436 98 10 16 chr10 91795689 91797834 -48518931 + L1PA8 LINE L1 3914 6044 -128 273 300 8 77 chr10 91798295 91798425 -48518340 + MIR SINE MIR 49 169 -93 271 289 99 4 chr10 91800421 91800550 -48516215 - MIR SINE MIR -57 205 4 327 49 0 0 chr10 91800768 91800809 -48515956 + (TG)n Simple_repeat Simple_repeat 2 42 0 365 291 80 25 chr10 91801863 91802189 -48514576 - L1M4 LINE L1 -1439 4943 4600 236 228 0 51 chr10 91802237 91802316 -48514449 - L1M4 LINE L1 -3939 2445 2371 660 295 59 53 chr10 91802723 91803776 -48512989 - L1MC4a LINE L1 -748 5398 4791 366 23 0 0 chr10 91804142 91804185 -48512580 + (TG)n Simple_repeat Simple_repeat 2 44 0 836 146 6 0 chr10 91805025 91805183 -48511582 + L1MA4 LINE L1 6137 6295 -5 231 36 0 0 chr10 91805628 91805656 -48511109 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 450 266 182 21 chr10 91806899 91807091 -48509674 - MIR SINE MIR -7 255 33 2370 238 86 160 chr10 91808258 91809630 -48507135 - L2 LINE L2 -5 3308 1837 1790 161 135 11 chr10 91809630 91810009 -48506756 - MSTB LTR MaLR 0 426 1 2370 238 86 160 chr10 91810009 91810127 -48506638 - L2 LINE L2 -1476 1837 1712 679 197 84 18 chr10 91810127 91810344 -48506421 - MER106B DNA MER1_type 0 1059 5 2370 238 86 160 chr10 91810344 91810911 -48505854 - L2 LINE L2 -1601 1712 1198 21 0 0 0 chr10 91811271 91811292 -48505473 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 21 chr10 91812565 91812613 -48504152 + (TATG)n Simple_repeat Simple_repeat 2 48 0 202 345 100 0 chr10 91812885 91812995 -48503770 - L2 LINE L2 -13 3259 3139 708 224 29 29 chr10 91813081 91813286 -48503479 + MIR SINE MIR 44 248 -14 21 36 0 0 chr10 91814005 91814033 -48502732 + AT_rich Low_complexity Low_complexity 1 28 0 372 226 73 58 chr10 91814382 91814519 -48502246 + MIR3 SINE MIR 67 205 -3 249 347 21 11 chr10 91815510 91815605 -48501160 + MIR3 SINE MIR 103 198 -10 1684 173 0 36 chr10 91815738 91816039 -48500726 - AluJo SINE Alu -12 300 11 21 0 0 0 chr10 91816115 91816136 -48500629 + AT_rich Low_complexity Low_complexity 1 21 0 360 153 51 0 chr10 91816561 91816679 -48500086 + (TA)n Simple_repeat Simple_repeat 1 124 0 1805 130 11 0 chr10 91816679 91816941 -48499824 - AluSx SINE Alu -26 286 22 2153 99 3 3 chr10 91817046 91817340 -48499425 - AluSx SINE Alu -18 294 1 1316 140 8 0 chr10 91817397 91817633 -48499132 - L1MA7 LINE L1 -1 6290 6053 2216 92 10 7 chr10 91817774 91818077 -48498688 - AluSc SINE Alu -5 304 1 21 82 0 0 chr10 91818255 91818304 -48498461 + AT_rich Low_complexity Low_complexity 1 49 0 533 123 12 0 chr10 91820185 91820266 -48496499 - L1MB7 LINE L1 -241 5922 5841 * 855 199 11 82 chr10 91820262 91820529 -48496236 + L1MB7 LINE L1 5917 6164 -20 2452 260 52 31 chr10 91820640 91822146 -48494619 - L1M4c LINE L1 -4240 2585 875 359 181 0 12 chr10 91822146 91822229 -48494536 + CT-rich Low_complexity Low_complexity 3 84 0 217 408 31 8 chr10 91822723 91822853 -48493912 - L3 LINE CR1 -1443 134 2 252 228 39 47 chr10 91824108 91824235 -48492530 - L1ME1 LINE L1 -1629 4517 4392 2260 214 36 2 chr10 91824237 91824769 -48491996 + L1ME1 LINE L1 4521 5070 -1076 3252 223 33 42 chr10 91825189 91825339 -48491426 + L1ME1 LINE L1 5122 5272 -894 5412 115 52 1 chr10 91825339 91826577 -48490188 + L1PA14 LINE L1 4873 6159 -2 3252 223 33 42 chr10 91826577 91827480 -48489285 + L1ME1 LINE L1 5272 6161 -5 2378 99 3 0 chr10 91827500 91827803 -48488962 + AluSp SINE Alu 1 304 -9 193 291 32 87 chr10 91830298 91830468 -48486297 - MIR SINE MIR -76 132 18 2138 134 0 6 chr10 91831640 91831954 -48484811 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 91836359 91836380 -48480385 + AT_rich Low_complexity Low_complexity 1 21 0 200 31 62 0 chr10 91836652 91836684 -48480081 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2379 186 52 58 chr10 91837232 91837841 -48478924 + L1MC4 LINE L1 7196 7801 -241 1069 199 45 55 chr10 91837838 91838129 -48478636 + L1MC4 LINE L1 7753 8040 -2 * 29 61 0 0 chr10 91838129 91838162 -48478603 + AT_rich Low_complexity Low_complexity 1 33 0 28 0 0 0 chr10 91838289 91838317 -48478448 + AT_rich Low_complexity Low_complexity 1 28 0 612 204 84 30 chr10 91838420 91838587 -48478178 + L1MC4 LINE L1 7862 8037 -5 427 306 32 28 chr10 91838616 91838832 -48477933 + L1MC4 LINE L1 7636 7852 -190 22 0 0 0 chr10 91839224 91839246 -48477519 + AT_rich Low_complexity Low_complexity 1 22 0 309 82 82 0 chr10 91840341 91840390 -48476375 + MADE1 DNA Mariner 1 53 -27 245 308 0 28 chr10 91840651 91840758 -48476007 - L1MC4 LINE L1 -1335 6707 6604 343 343 22 34 chr10 91841794 91841899 -48474866 + MER5A DNA MER1_type 10 114 -75 1179 188 37 94 chr10 91841899 91842356 -48474409 + MSTB1 LTR MaLR 2 432 0 343 343 22 34 chr10 91842356 91842428 -48474337 + MER5A DNA MER1_type 114 185 -4 290 238 40 56 chr10 91842633 91842759 -48474006 - L1MC5 LINE L1 -48 7913 7790 2009 158 7 0 chr10 91842796 91843106 -48473659 + AluSx SINE Alu 1 312 0 22 35 0 0 chr10 91843179 91843208 -48473557 + AT_rich Low_complexity Low_complexity 1 29 0 205 229 108 48 chr10 91843290 91843373 -48473392 + MIR SINE MIR 166 253 -9 1202 233 73 99 chr10 91843400 91843876 -48472889 + MLT1F1 LTR MaLR 1 464 -103 834 256 101 108 chr10 91843879 91844542 -48472223 + L1MC4 LINE L1 5707 6373 -1669 324 0 0 0 chr10 91844542 91844578 -48472187 + (TG)n Simple_repeat Simple_repeat 2 37 0 834 256 101 108 chr10 91844578 91845585 -48471180 + L1MC4 LINE L1 6373 7461 -581 728 173 45 109 chr10 91845585 91845787 -48470978 + MER5A DNA MER1_type 1 189 0 834 256 101 108 chr10 91845787 91846223 -48470542 + L1MC4 LINE L1 7461 7899 -143 44 46 0 0 chr10 91846237 91846302 -48470463 + AT_rich Low_complexity Low_complexity 1 65 0 204 40 0 0 chr10 91846955 91846980 -48469785 + (CA)n Simple_repeat Simple_repeat 2 26 0 813 290 15 23 chr10 91847924 91848183 -48468582 + MIR SINE MIR 6 262 0 342 285 49 32 chr10 91848992 91849115 -48467650 + L2 LINE L2 3148 3272 0 278 169 15 0 chr10 91849153 91849218 -48467547 + GA-rich Low_complexity Low_complexity 5 70 0 330 331 106 76 chr10 91849322 91849624 -48467141 + L3b LINE CR1 1207 1517 -66 1932 98 0 15 chr10 91850292 91850557 -48466208 + AluSg SINE Alu 35 295 -15 29 28 0 0 chr10 91850582 91850618 -48466147 + AT_rich Low_complexity Low_complexity 1 36 0 239 245 32 43 chr10 91850629 91850723 -48466042 - MIR SINE MIR -46 216 124 1357 275 150 19 chr10 91850988 91851527 -48465238 - L2 LINE L2 -820 2494 1885 635 226 18 0 chr10 91851574 91851738 -48465027 - L1ME4a LINE L1 -275 5846 5680 457 333 7 7 chr10 91852546 91852696 -48464069 + MIR SINE MIR 52 201 -61 507 281 25 20 chr10 91852886 91853089 -48463676 - L1MC4a LINE L1 -1883 5925 5722 746 264 119 14 chr10 91853394 91853683 -48463082 - L1MC4a LINE L1 -498 5672 5350 3298 158 70 20 chr10 91853723 91853762 -48463003 - L1MB1 LINE L1 -3 6165 6129 2165 147 21 19 chr10 91853762 91854136 -48462629 - THE1C LTR MaLR 0 375 1 3298 158 70 20 chr10 91854136 91854734 -48462031 - L1MB1 LINE L1 -39 6129 5496 28 0 0 0 chr10 91854936 91854964 -48461801 + AT_rich Low_complexity Low_complexity 1 28 0 613 362 37 65 chr10 91855034 91855437 -48461328 + L2 LINE L2 2866 3257 -15 2201 146 5 45 chr10 91855506 91855909 -48460856 + MLT1B LTR MaLR 4 390 0 201 312 70 25 chr10 91858340 91858497 -48458268 - MIR SINE MIR 0 262 99 508 284 49 12 chr10 91858638 91858800 -48457965 - MER5B DNA MER1_type -1 177 10 21 0 0 0 chr10 91859031 91859052 -48457713 + AT_rich Low_complexity Low_complexity 1 21 0 243 68 0 81 chr10 91859307 91859381 -48457384 + (TA)n Simple_repeat Simple_repeat 1 68 0 391 292 83 88 chr10 91862290 91862629 -48454136 + L3b LINE CR1 1111 1447 -136 211 139 28 0 chr10 91863977 91864013 -48452752 + (TATAG)n Simple_repeat Simple_repeat 2 38 0 910 168 6 0 chr10 91864193 91864354 -48452411 - MER3 DNA MER1_type -46 163 2 273 71 0 18 chr10 91864588 91864644 -48452121 - LTR66 LTR ERVL -171 439 385 27 0 0 0 chr10 91864651 91864678 -48452087 + AT_rich Low_complexity Low_complexity 1 27 0 29 28 0 0 chr10 91865076 91865112 -48451653 + AT_rich Low_complexity Low_complexity 1 36 0 842 269 97 97 chr10 91865952 91866109 -48450656 + HAL1 LINE L1 2 158 -2349 1820 162 0 10 chr10 91866109 91866405 -48450360 + AluJo SINE Alu 4 296 -16 842 269 97 97 chr10 91866405 91866961 -48449804 + HAL1 LINE L1 157 715 -1792 607 281 23 6 chr10 91866963 91867134 -48449631 + MER91A DNA MER1_type 1 174 -22 200 302 0 0 chr10 91867161 91867204 -48449561 + MER91A DNA MER1_type 142 184 -12 510 265 61 31 chr10 91867319 91867678 -48449087 + HAL1 LINE L1 788 1196 -1311 1173 267 119 39 chr10 91867748 91868188 -48448577 + HAL1 LINE L1 1392 1890 -617 2227 94 0 29 chr10 91868188 91868496 -48448269 + AluSx SINE Alu 1 299 -13 1173 267 119 39 chr10 91868496 91868624 -48448141 + HAL1 LINE L1 1890 2006 -501 21 57 0 0 chr10 91869581 91869616 -48447149 + AT_rich Low_complexity Low_complexity 1 35 0 245 206 65 28 chr10 91870206 91870313 -48446452 - L1MC5 LINE L1 -37 7924 7814 465 265 98 39 chr10 91870599 91870803 -48445962 + MIR SINE MIR 41 256 -6 316 282 36 9 chr10 91870804 91870914 -48445851 - L1MDa LINE L1 -3970 2570 2458 184 314 50 75 chr10 91873012 91873171 -48443594 - L2 LINE L2 -8 3305 3151 230 418 6 12 chr10 91874030 91874200 -48442565 - L2 LINE L2 -557 2757 2589 340 335 114 12 chr10 91874338 91874663 -48442102 - L2 LINE L2 -1036 2278 1921 204 347 32 11 chr10 91874785 91874880 -48441885 + MIR SINE MIR 51 147 -61 293 372 84 4 chr10 91874985 91875211 -48441554 + MIR SINE MIR 13 256 -6 298 262 26 8 chr10 91875349 91875448 -48441317 + MIR SINE MIR 24 124 -84 203 263 118 0 chr10 91875613 91875689 -48441076 + MIR SINE MIR 178 262 0 1319 58 29 0 chr10 91875934 91876108 -48440657 + L1PA11 LINE L1 5994 6172 -2 559 312 35 10 chr10 91876523 91876725 -48440040 + MIR SINE MIR 14 220 -42 * 1264 277 122 23 chr10 91876724 91877496 -48439269 + L2 LINE L2 2452 3311 -2 351 328 61 21 chr10 91877813 91878139 -48438626 + L1MB2 LINE L1 5595 5933 -238 * 1887 223 28 47 chr10 91877849 91878387 -48438378 + L1ME3A LINE L1 5638 6165 -5 279 312 32 32 chr10 91880042 91880167 -48436598 + L2 LINE L2 3148 3272 0 384 278 124 22 chr10 91880812 91881085 -48435680 - MARNA DNA Mariner -13 573 273 297 223 125 45 chr10 91881198 91881310 -48435455 - MARNA DNA Mariner -457 129 9 676 276 71 27 chr10 91884487 91884712 -48432053 + MIR SINE MIR 28 262 0 2289 131 17 3 chr10 91885807 91886166 -48430599 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr10 91886469 91886497 -48430268 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 91886664 91886694 -48430071 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 91886838 91886866 -48429899 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 91886903 91886931 -48429834 + AT_rich Low_complexity Low_complexity 1 28 0 531 123 12 0 chr10 91888680 91888761 -48428004 - L1MB7 LINE L1 -246 5922 5841 * 1061 165 21 79 chr10 91888757 91889036 -48427729 + L1MB7 LINE L1 5917 6179 -5 223 179 0 0 chr10 91889269 91889308 -48427457 + MER5B DNA MER1_type 1 39 -139 688 225 56 0 chr10 91889390 91889550 -48427215 + MER5A DNA MER1_type 2 170 -19 491 148 0 0 chr10 91890228 91890309 -48426456 + L1P LINE L1 4874 4954 -1192 474 73 0 0 chr10 91890309 91890371 -48426394 + L1PA14 LINE L1 6092 6159 -2 924 254 32 26 chr10 91890420 91890766 -48425999 + L1M4 LINE L1 3437 3784 -2362 1121 205 24 79 chr10 91891319 91891492 -48425273 + L1MA10 LINE L1 5982 6128 -206 1683 190 6 19 chr10 91891492 91891808 -48424957 - AluJo SINE Alu 0 312 1 1121 205 24 79 chr10 91891808 91892005 -48424760 + L1MA10 LINE L1 6128 6334 0 286 315 0 0 chr10 91892007 91892080 -48424685 + L3 LINE CR1 1500 1572 -5 230 303 124 11 chr10 91894202 91894380 -48422385 + L2 LINE L2 3116 3313 0 1939 128 0 0 chr10 91894385 91894650 -48422115 + AluSx SINE Alu 1 265 -47 231 122 0 0 chr10 91895647 91895696 -48421069 - LTR66 LTR ERVL -168 442 394 229 98 0 0 chr10 91895723 91895764 -48421001 - LTR66 LTR ERVL -172 438 398 * 240 139 0 0 chr10 91895734 91895777 -48420988 + LTR66 LTR ERVL 398 440 -170 222 171 0 0 chr10 91895781 91895822 -48420943 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 712 185 79 17 chr10 91895824 91896002 -48420763 + MER5A DNA MER1_type 1 189 0 740 296 56 47 chr10 91896272 91896823 -48419942 + L2 LINE L2 2708 3258 -55 394 365 83 0 chr10 91897935 91898116 -48418649 + MIR SINE MIR 62 257 -5 181 257 64 55 chr10 91898629 91898738 -48418027 - MIR SINE MIR -6 256 147 271 301 68 45 chr10 91898773 91898906 -48417859 - MIR SINE MIR -110 152 17 28 0 0 0 chr10 91898990 91899018 -48417747 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 91899156 91899184 -48417581 + AT_rich Low_complexity Low_complexity 1 28 0 444 294 101 8 chr10 91899353 91899472 -48417293 + L2 LINE L2 3184 3313 0 3254 130 67 17 chr10 91899505 91900090 -48416675 - MER39B LTR ERV1 -35 618 5 1576 218 52 97 chr10 91900268 91900805 -48415960 + MLT2B1 LTR ERVL 1 513 -7 786 277 106 61 chr10 91901149 91901802 -48414963 + L1MC4a LINE L1 5278 5959 -1849 230 106 21 0 chr10 91901804 91901851 -48414914 + LTR66 LTR ERVL 394 441 -169 259 200 307 0 chr10 91902600 91902675 -48414090 - MIR SINE MIR -1 261 164 205 138 0 0 chr10 91903361 91903390 -48413375 + (CCCCCG)n Simple_repeat Simple_repeat 3 31 0 308 287 74 9 chr10 91904255 91904363 -48412402 + MIR SINE MIR 87 201 -61 316 306 94 55 chr10 91904432 91904687 -48412078 + L1 LINE L1 4068 4332 -1814 1168 161 13 40 chr10 91905120 91905344 -48411421 - AluJb SINE Alu -10 302 85 289 297 76 60 chr10 91905611 91905796 -48410969 - MIR3 SINE MIR -6 202 15 635 114 0 0 chr10 91906165 91906253 -48410512 - HY4 scRNA scRNA -3 90 3 232 356 227 11 chr10 91906259 91906523 -48410242 + L2 LINE L2 2593 2913 -401 476 263 69 94 chr10 91906947 91907266 -48409499 + L2 LINE L2 2951 3261 -52 440 136 0 0 chr10 91907381 91907447 -48409318 - L1P LINE L1 -718 5413 5348 3241 166 100 5 chr10 91908437 91909214 -48407551 - Charlie5 DNA MER1_type -116 2496 1646 661 116 91 0 chr10 91909217 91909338 -48407427 - Charlie5 DNA MER1_type -2448 164 33 278 298 64 0 chr10 91909558 91909652 -48407113 - MER94 DNA DNA -23 111 12 491 319 47 18 chr10 91910272 91910441 -48406324 - MIR SINE MIR -29 233 60 468 327 60 7 chr10 91910887 91911037 -48405728 + MIR SINE MIR 20 177 -85 229 320 6 13 chr10 91911406 91911562 -48405203 + (TA)n Simple_repeat Simple_repeat 1 155 0 221 327 18 35 chr10 91911637 91911750 -48405015 + L2 LINE L2 3203 3313 0 275 200 7 51 chr10 91912475 91912542 -48404223 + MIR SINE MIR 14 81 -127 1017 281 45 37 chr10 91912912 91913293 -48403472 - LTR16A1 LTR ERVL 0 457 74 635 304 149 10 chr10 91913475 91913863 -48402902 - ERVL LTR ERVL -505 5259 4818 21 0 0 0 chr10 91914190 91914211 -48402554 + AT_rich Low_complexity Low_complexity 1 21 0 959 273 83 20 chr10 91915172 91915667 -48401098 - L1M4 LINE L1 -1254 4892 4367 772 232 84 55 chr10 91915676 91916129 -48400636 - L1MC5 LINE L1 -30 7931 7466 250 195 52 0 chr10 91916184 91916261 -48400504 + (TA)n Simple_repeat Simple_repeat 2 82 0 322 322 0 0 chr10 91916261 91916351 -48400414 + L1MC4 LINE L1 6614 6703 -1339 * 369 278 0 0 chr10 91916271 91916361 -48400404 - L1MC4 LINE L1 -1339 6703 6614 427 236 60 20 chr10 91916381 91916577 -48400188 - L1ME1 LINE L1 -122 6044 5794 3400 188 9 7 chr10 91917053 91917734 -48399031 - L1M4 LINE L1 -3338 2808 2127 3309 96 43 2 chr10 91917743 91918253 -48398512 - L1PBa LINE L1 -4116 2747 2217 874 320 68 23 chr10 91919416 91919859 -48396906 + L2 LINE L2 2425 2887 -427 781 291 75 11 chr10 91921083 91921434 -48395331 + L2 LINE L2 2577 2953 -319 * 933 224 11 0 chr10 91921415 91921594 -48395171 + MER5A DNA MER1_type 7 187 -2 1066 251 137 40 chr10 91921635 91922038 -48394727 - LTR16A1 LTR ERVL -4 453 12 310 237 32 43 chr10 91922244 91922337 -48394428 + L2 LINE L2 3015 3106 -207 2025 229 37 22 chr10 91922345 91922887 -48393878 - L1ME1 LINE L1 -6 6160 5611 1229 212 36 23 chr10 91922888 91923205 -48393560 + MLT1A1 LTR MaLR 2 426 -41 928 243 58 12 chr10 91923305 91923564 -48393201 - L1ME1 LINE L1 -581 5585 5315 1122 253 49 37 chr10 91923568 91923975 -48392790 - L1MD3 LINE L1 -20 7975 7564 990 180 49 35 chr10 91924054 91924338 -48392427 - L1ME1 LINE L1 -914 5232 4945 351 281 14 82 chr10 91924660 91924806 -48391959 - MIR3 SINE MIR -1 207 72 411 139 0 35 chr10 91924838 91924924 -48391841 - LTR30 LTR ERV1 -98 624 542 202 250 22 22 chr10 91926435 91926527 -48390238 + CT-rich Low_complexity Low_complexity 4 95 0 794 234 151 78 chr10 91927866 91927985 -48388780 - L1ME3A LINE L1 -311 5928 5819 715 188 0 0 chr10 91927985 91928118 -48388647 - FLAM_C SINE Alu 0 133 1 794 234 151 78 chr10 91928118 91928396 -48388369 - L1ME3A LINE L1 -420 5819 5502 855 150 0 0 chr10 91928396 91928529 -48388236 - AluSg/x SINE Alu -6 304 172 1033 113 0 7 chr10 91928530 91928671 -48388094 - AluSq SINE Alu -66 247 108 570 229 13 13 chr10 91928693 91928846 -48387919 - L1ME3A LINE L1 -747 5486 5334 426 308 39 0 chr10 91928857 91929013 -48387752 - L1ME3A LINE L1 -980 5235 5074 194 0 39 0 chr10 91930111 91930137 -48386628 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 341 112 19 47 chr10 91933328 91933435 -48383330 + (TTATA)n Simple_repeat Simple_repeat 3 106 0 2092 165 59 0 chr10 91933603 91933887 -48382878 - L1MA9 LINE L1 -71 6241 5924 180 0 0 0 chr10 91933887 91933907 -48382858 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2092 165 59 0 chr10 91933907 91934027 -48382738 - L1MA9 LINE L1 -388 5924 5813 230 192 0 55 chr10 91934027 91934100 -48382665 + LTR66 LTR ERVL 370 438 -172 216 158 0 0 chr10 91934100 91934138 -48382627 + (CA)n Simple_repeat Simple_repeat 1 38 0 331 296 25 25 chr10 91934245 91934444 -48382321 - L1ME3A LINE L1 -4087 2309 2111 339 284 114 63 chr10 91934671 91935083 -48381682 - L1ME3A LINE L1 -4654 1482 805 1258 200 138 22 chr10 91935129 91935354 -48381411 - MSTD LTR MaLR 0 396 114 1925 130 4 0 chr10 91935354 91935631 -48381134 - AluSx SINE Alu -8 304 27 1258 200 138 22 chr10 91935631 91935760 -48381005 - MSTD LTR MaLR -282 114 1 44 94 0 0 chr10 91936795 91936923 -48379842 + AT_rich Low_complexity Low_complexity 1 128 0 2174 135 0 0 chr10 91937219 91937522 -48379243 + AluSx SINE Alu 1 303 -9 427 248 91 16 chr10 91937751 91937872 -48378893 + L2 LINE L2 3182 3311 -2 391 362 20 20 chr10 91937919 91938115 -48378650 + MIR SINE MIR 2 197 -65 2097 270 80 67 chr10 91938332 91939605 -48377160 - L2 LINE L2 0 3313 1861 194 241 37 19 chr10 91940572 91940626 -48376139 - MIR SINE MIR -207 55 1 473 243 10 0 chr10 91942209 91942312 -48374453 + L1MCa LINE L1 19 122 -6304 2109 187 53 0 chr10 91942333 91942713 -48374052 + L1MCa LINE L1 360 759 -5667 740 177 0 0 chr10 91942714 91942838 -48373927 + L1MC1 LINE L1 6196 6319 -14 2021 148 34 31 chr10 91943155 91943589 -48373176 + MER51B LTR ERV1 1 377 0 2460 66 0 3 chr10 91944030 91944333 -48372432 + AluSc SINE Alu 3 304 -5 1647 241 90 15 chr10 91944683 91945396 -48371369 + L1M4 LINE L1 4264 5109 -1037 7478 114 45 4 chr10 91945396 91946698 -48370067 + L1PBa LINE L1 1337 2692 -4171 1058 154 0 0 chr10 91947661 91947823 -48368942 - AluSg/x SINE Alu -24 288 127 572 241 152 0 chr10 91947942 91948100 -48368665 - MIR SINE MIR -44 218 37 225 0 0 0 chr10 91948374 91948399 -48368366 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1982 110 0 0 chr10 91948409 91948672 -48368093 - AluSx SINE Alu -49 263 1 844 223 0 6 chr10 91949194 91949360 -48367405 - AluJo SINE Alu -147 165 1 23 33 0 0 chr10 91949683 91949713 -48367052 + AT_rich Low_complexity Low_complexity 1 30 0 915 291 99 83 chr10 91950411 91950786 -48365979 - L2 LINE L2 -614 2700 2308 974 211 156 46 chr10 91950786 91951113 -48365652 - MLT1A1 LTR MaLR -2 363 1 915 291 99 83 chr10 91951113 91951390 -48365375 - L2 LINE L2 -1006 2308 2037 1213 138 0 0 chr10 91951517 91951691 -48365074 + AluSx SINE Alu 1 174 -138 21 0 0 0 chr10 91952288 91952309 -48364456 + AT_rich Low_complexity Low_complexity 1 21 0 3017 173 40 26 chr10 91953470 91954150 -48362615 - L1P3 LINE L1 -4734 1141 990 7349 120 43 14 chr10 91954378 91955055 -48361710 - Tigger1 DNA MER2_type -868 1550 822 1917 176 14 24 chr10 91955055 91955470 -48361295 - L1MA4 LINE L1 -5 6295 5885 7349 120 43 14 chr10 91955470 91955976 -48360789 - Tigger1 DNA MER2_type -1596 822 332 209 243 0 54 chr10 91956149 91956223 -48360542 + GA-rich Low_complexity Low_complexity 3 72 0 442 270 75 31 chr10 91956771 91956930 -48359835 + MIR3 SINE MIR 41 206 -2 22 0 0 0 chr10 91957096 91957118 -48359647 + AT_rich Low_complexity Low_complexity 1 22 0 207 100 0 0 chr10 91957195 91957225 -48359540 + (T)n Simple_repeat Simple_repeat 1 30 0 1797 149 11 0 chr10 91957488 91957764 -48359001 + AluSx SINE Alu 16 294 -18 1041 360 73 28 chr10 91958463 91959253 -48357512 + L2 LINE L2 2152 2977 -337 673 174 0 8 chr10 91959837 91959958 -48356807 + FLAM_C SINE Alu 4 123 -20 448 309 164 43 chr10 91960421 91961181 -48355584 + L2 LINE L2 2328 3294 -19 376 335 26 13 chr10 91961206 91961361 -48355404 - MER5A DNA MER1_type -32 157 1 192 77 0 0 chr10 91961592 91961618 -48355147 + (T)n Simple_repeat Simple_repeat 1 26 0 25 31 0 0 chr10 91962548 91962580 -48354185 + AT_rich Low_complexity Low_complexity 1 32 0 252 309 105 68 chr10 91962613 91962775 -48353990 + MIR3 SINE MIR 35 202 -6 214 340 0 0 chr10 91962937 91962987 -48353778 + L2 LINE L2 3134 3183 -89 255 152 0 0 chr10 91963068 91963114 -48353651 + GA-rich Low_complexity Low_complexity 2 47 0 1994 201 100 28 chr10 91963894 91964472 -48352293 + L1ME1 LINE L1 5543 6162 -4 1820 151 3 3 chr10 91964810 91965121 -48351644 + AluSx SINE Alu 1 311 0 525 217 33 8 chr10 91965181 91965301 -48351464 + AluJb SINE Alu 180 302 -10 245 183 17 0 chr10 91965323 91965383 -48351382 + GA-rich Low_complexity Low_complexity 4 64 0 499 305 121 0 chr10 91965400 91965590 -48351175 - MIR SINE MIR -1 261 49 277 277 72 0 chr10 91965574 91965657 -48351108 - L2 LINE L2 -999 2315 2227 * 263 175 49 21 chr10 91965750 91965893 -48350872 + (TA)n Simple_repeat Simple_repeat 2 148 0 276 267 10 50 chr10 91966297 91966398 -48350367 - LTR33A LTR ERVL 0 523 427 494 187 75 0 chr10 91966988 91967095 -48349670 + Charlie1 DNA MER1_type 2411 2525 -236 368 128 75 53 chr10 91967097 91967191 -48349574 + Charlie1 DNA MER1_type 2666 2761 0 24 53 0 0 chr10 91968057 91968095 -48348670 + AT_rich Low_complexity Low_complexity 1 38 0 2300 93 0 0 chr10 91968306 91968596 -48348169 - AluSx SINE Alu -21 291 2 22 56 0 0 chr10 91969678 91969714 -48347051 + AT_rich Low_complexity Low_complexity 1 36 0 28 61 0 0 chr10 91969874 91969923 -48346842 + AT_rich Low_complexity Low_complexity 1 49 0 1496 17 11 0 chr10 91970271 91970450 -48346315 - L1PA5 LINE L1 -3 6151 5971 24 32 0 0 chr10 91970927 91970958 -48345807 + AT_rich Low_complexity Low_complexity 1 31 0 2123 171 13 5 chr10 91971045 91971430 -48345335 + MLT1B LTR MaLR 3 390 0 189 0 0 0 chr10 91972853 91972874 -48343891 + (TA)n Simple_repeat Simple_repeat 2 22 0 1573 178 30 0 chr10 91974076 91974345 -48342420 + AluJb SINE Alu 1 277 -35 776 261 65 14 chr10 91974509 91974800 -48341965 + L1ME3 LINE L1 5004 5309 -837 1929 151 3 16 chr10 91974813 91975118 -48341647 + AluSx SINE Alu 11 311 -1 2724 256 18 37 chr10 91975133 91975247 -48341518 + L1ME3 LINE L1 5293 5408 -754 1698 104 0 4 chr10 91975247 91975477 -48341288 + AluSq SINE Alu 69 297 -16 2724 256 18 37 chr10 91975477 91976248 -48340517 + L1ME3 LINE L1 5408 6161 -1 453 304 116 5 chr10 91976267 91976491 -48340274 + L2 LINE L2 1935 2183 -1131 351 301 62 57 chr10 91976491 91976667 -48340098 + MER5B DNA MER1_type 1 177 -1 1403 299 90 33 chr10 91976667 91977745 -48339020 + L2 LINE L2 2175 3313 0 562 278 66 62 chr10 91977782 91978041 -48338724 - MIR SINE MIR 0 262 3 260 55 73 0 chr10 91978272 91978327 -48338438 + (TA)n Simple_repeat Simple_repeat 1 59 0 231 311 24 92 chr10 91978352 91978516 -48338249 - L2 LINE L2 -113 3159 3007 6853 66 10 2 chr10 91978554 91979824 -48336941 + L1PA7 LINE L1 4847 6125 -29 23 54 0 0 chr10 91979864 91979901 -48336864 + AT_rich Low_complexity Low_complexity 1 37 0 860 77 0 0 chr10 91979947 91980064 -48336701 - L1PA13 LINE L1 -3 6160 6044 620 276 83 0 chr10 91981239 91981420 -48335345 + MIR SINE MIR 3 198 -64 331 296 68 0 chr10 91981423 91981555 -48335210 - MIR SINE MIR -1 261 121 1982 107 23 7 chr10 91981911 91982210 -48334555 - AluSg SINE Alu -6 304 1 257 311 26 118 chr10 91982372 91982678 -48334087 - L3 LINE CR1 -113 1464 1187 875 229 42 5 chr10 91982748 91982940 -48333825 + AluJo SINE Alu 1 199 -113 302 206 14 0 chr10 91983871 91983944 -48332821 + CT-rich Low_complexity Low_complexity 4 77 0 249 294 37 64 chr10 91984171 91984280 -48332485 - L2 LINE L2 -199 3073 2968 256 260 120 0 chr10 91984360 91984460 -48332305 - L1ME4a LINE L1 -31 6090 5979 470 209 8 54 chr10 91984470 91984599 -48332166 - L1MA10 LINE L1 -1 6333 6211 415 377 115 0 chr10 91985434 91985686 -48331079 - L2 LINE L2 -382 2932 2652 438 294 152 5 chr10 91986203 91986387 -48330378 - MIR SINE MIR -48 214 4 960 281 97 57 chr10 91986405 91987099 -48329666 - L2 LINE L2 0 3313 2576 657 307 40 35 chr10 91987370 91987622 -48329143 - MIR SINE MIR -13 249 4 26 74 0 0 chr10 91987664 91987718 -48329047 + AT_rich Low_complexity Low_complexity 1 54 0 189 214 0 0 chr10 91988524 91988566 -48328199 + GA-rich Low_complexity Low_complexity 1 42 0 414 0 0 0 chr10 91988799 91988845 -48327920 + (CA)n Simple_repeat Simple_repeat 2 47 0 204 40 0 0 chr10 91988844 91988869 -48327896 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 211 213 21 21 chr10 91989232 91989279 -48327486 + MIR SINE MIR 118 164 -98 2288 76 7 0 chr10 91990352 91990641 -48326124 - AluY SINE Alu -20 291 1 299 231 265 26 chr10 91990772 91990889 -48325876 + MIR SINE MIR 91 235 -27 401 291 77 53 chr10 91991401 91991597 -48325168 + MIR SINE MIR 13 212 -50 1235 34 0 0 chr10 91992009 91992157 -48324608 - L1PA4 LINE L1 -3 6152 6005 405 264 250 7 chr10 91994296 91994440 -48322325 + MER5A DNA MER1_type 10 188 -1 393 22 0 0 chr10 91995434 91995480 -48321285 + (TTA)n Simple_repeat Simple_repeat 2 47 0 958 242 116 53 chr10 91996573 91996973 -48319792 - L1MC5 LINE L1 -71 7890 7450 2123 121 3 0 chr10 91996973 91997270 -48319495 - AluSg SINE Alu -12 298 1 958 242 116 53 chr10 91997270 91997378 -48319387 - L1MC5 LINE L1 -511 7450 7350 905 146 0 0 chr10 91997455 91997592 -48319173 - L1PB4 LINE L1 -5 6151 6015 624 200 79 42 chr10 91997599 91997764 -48319001 - MER20 DNA MER1_type -45 174 4 24 0 0 0 chr10 91997796 91997820 -48318945 + AT_rich Low_complexity Low_complexity 1 24 0 512 231 178 65 chr10 91997872 91998227 -48318538 - L1MC5 LINE L1 -722 7239 6845 347 247 139 57 chr10 91998229 91998387 -48318378 - L1MC4a LINE L1 -1021 6787 6617 507 352 45 6 chr10 91998914 91999093 -48317672 - MIR3 SINE MIR -7 201 16 1929 142 14 0 chr10 91999585 91999899 -48316866 + AluSx SINE Alu 1 312 0 333 250 180 8 chr10 92000183 92000311 -48316454 + MIR SINE MIR 36 185 -77 26 0 0 0 chr10 92000820 92000846 -48315919 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr10 92001913 92001935 -48314830 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr10 92001985 92002032 -48314733 + AT_rich Low_complexity Low_complexity 1 47 0 481 274 65 89 chr10 92002078 92002242 -48314523 - L2 LINE L2 -77 3236 3078 2101 169 7 14 chr10 92002242 92002661 -48314104 - L1MA3 LINE L1 0 6305 5890 481 274 65 89 chr10 92002661 92002744 -48314021 - L2 LINE L2 -235 3078 2995 1502 229 111 18 chr10 92002804 92003246 -48313519 - LTR40a LTR ERVL -36 483 1 609 250 154 0 chr10 92003246 92003402 -48313363 - MER5A DNA MER1_type -9 180 1 204 313 36 0 chr10 92004436 92004519 -48312246 - MIR SINE MIR -41 221 136 27 49 0 0 chr10 92004521 92004562 -48312203 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr10 92005056 92005078 -48311687 + AT_rich Low_complexity Low_complexity 1 22 0 505 176 46 0 chr10 92005191 92005299 -48311466 + L1MA3 LINE L1 21 133 -7432 * 16200 101 26 42 chr10 92005296 92006627 -48310138 + L1MA3 LINE L1 1099 2449 -5275 264 150 0 0 chr10 92006627 92006667 -48310098 + Alu SINE Alu 1 40 -262 1676 83 0 22 chr10 92006667 92006895 -48309870 + AluSg/x SINE Alu 86 308 -2 16200 101 26 42 chr10 92006895 92007899 -48308866 + L1MA3 LINE L1 2448 3466 -4258 1902 118 20 34 chr10 92007899 92008195 -48308570 + AluSx SINE Alu 1 292 -20 16200 101 26 42 chr10 92008195 92008853 -48307912 + L1MA3 LINE L1 3466 7724 0 691 280 43 47 chr10 92008941 92009406 -48307359 - L1MC5 LINE L1 -42 7919 7457 719 164 8 23 chr10 92010935 92011063 -48305702 + AluJb SINE Alu 6 131 -181 202 21 106 0 chr10 92011063 92011110 -48305655 + (TA)n Simple_repeat Simple_repeat 1 52 0 51 17 0 0 chr10 92011239 92011297 -48305468 + AT_rich Low_complexity Low_complexity 1 58 0 319 257 55 18 chr10 92011309 92011418 -48305347 - L1MC4 LINE L1 -1321 6721 6609 304 228 0 89 chr10 92011438 92011539 -48305226 + L1MC4 LINE L1 6612 6703 -1339 * 317 213 64 32 chr10 92011450 92011544 -48305221 - L1MC4 LINE L1 -1338 6704 6608 201 74 0 0 chr10 92011559 92011586 -48305179 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 192 0 39 chr10 92011608 92011660 -48305105 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 450 137 11 50 chr10 92011679 92011861 -48304904 + (TA)n Simple_repeat Simple_repeat 1 175 0 300 27 0 0 chr10 92011905 92011942 -48304823 + (TG)n Simple_repeat Simple_repeat 2 38 0 1685 115 200 27 chr10 92012409 92012774 -48303991 - MSTA LTR MaLR 0 428 1 500 229 78 22 chr10 92013594 92013773 -48302992 - MER5A DNA MER1_type 0 189 1 216 366 0 0 chr10 92014401 92014472 -48302293 - MIR SINE MIR -7 255 185 462 315 61 6 chr10 92014522 92014709 -48302056 + MIR SINE MIR 63 257 -5 342 309 168 0 chr10 92014958 92015107 -48301658 + MIR3 SINE MIR 32 205 -3 445 241 19 28 chr10 92015529 92015637 -48301128 + MER21B LTR ERV1 312 418 -445 506 165 0 18 chr10 92016575 92016798 -48299967 + L1MB3 LINE L1 6077 6297 0 671 262 7 0 chr10 92017059 92017200 -48299565 - FRAM SINE Alu -30 146 5 797 179 0 21 chr10 92017232 92017377 -48299388 - FLAM_C SINE Alu -1 142 1 286 317 87 0 chr10 92018577 92018681 -48298084 + MIR SINE MIR 89 201 -61 444 241 44 38 chr10 92018882 92019040 -48297725 + MER104 DNA Tc2 6 164 -16 2124 119 10 6 chr10 92019961 92020272 -48296493 + AluSx SINE Alu 1 312 0 226 292 88 18 chr10 92020325 92020438 -48296327 + L1ME LINE L1 5527 5647 -523 390 311 72 36 chr10 92020615 92020782 -48295983 + MER45A DNA AcHobo 4 176 -2 21 0 0 0 chr10 92020827 92020848 -48295917 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 92020943 92020970 -48295795 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr10 92024615 92024647 -48292118 + AT_rich Low_complexity Low_complexity 1 32 0 2110 209 117 58 chr10 92024664 92025456 -48291309 - Charlie2 DNA MER1_type -16 2846 1993 2140 66 35 0 chr10 92025456 92025744 -48291021 - L1PA7 LINE L1 -1 6153 5856 2110 209 117 58 chr10 92025744 92025850 -48290915 - Charlie2 DNA MER1_type -869 1993 1895 577 304 105 36 chr10 92025895 92026171 -48290594 - Charlie2 DNA MER1_type -2452 330 36 284 316 74 48 chr10 92026183 92026575 -48290190 - L1ME4a LINE L1 -214 5907 5506 395 119 15 0 chr10 92026588 92026655 -48290110 - L1ME3 LINE L1 -2 6229 6162 1876 238 104 34 chr10 92026665 92027427 -48289338 - L1ME3 LINE L1 -158 6075 5257 905 192 44 15 chr10 92027427 92027630 -48289135 - L1MA9 LINE L1 -38 6274 6066 2010 151 6 6 chr10 92027633 92027945 -48288820 - AluSx SINE Alu 0 312 1 645 242 147 13 chr10 92027946 92028260 -48288505 - L1ME3 LINE L1 -951 5264 4909 423 267 53 111 chr10 92029242 92029467 -48287298 + MIR SINE MIR 1 212 -50 802 307 16 30 chr10 92029679 92029829 -48286936 - L1ME3 LINE L1 -1800 4415 4264 2047 109 0 31 chr10 92029829 92030158 -48286607 + AluSx SINE Alu 1 320 0 802 307 16 30 chr10 92030158 92030439 -48286326 - L1ME3 LINE L1 -1951 4264 3989 1342 245 88 26 chr10 92030650 92031298 -48285467 - L1ME3 LINE L1 -2587 3628 2941 * 1361 246 51 47 chr10 92031295 92031909 -48284856 - L1ME3 LINE L1 -3488 2727 2154 361 118 0 40 chr10 92031916 92031992 -48284773 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 2262 105 3 0 chr10 92032523 92032827 -48283938 - AluSx SINE Alu -7 305 1 230 193 18 0 chr10 92034427 92034484 -48282281 + (TA)n Simple_repeat Simple_repeat 1 58 0 40 37 0 0 chr10 92034511 92034565 -48282200 + AT_rich Low_complexity Low_complexity 1 54 0 375 233 57 114 chr10 92035324 92035500 -48281265 - MIR SINE MIR -23 239 74 286 362 21 0 chr10 92035513 92035654 -48281111 - LTR16B LTR ERVL -320 144 1 1320 128 0 9 chr10 92036496 92036707 -48280058 + L1PA13 LINE L1 5950 6158 -5 24 77 0 0 chr10 92037060 92037112 -48279653 + AT_rich Low_complexity Low_complexity 1 52 0 1966 127 14 3 chr10 92038186 92038477 -48278288 + AluSq SINE Alu 1 294 -19 367 249 5 102 chr10 92038612 92038817 -48277948 - MER5A DNA MER1_type -3 186 2 537 241 56 144 chr10 92038870 92039040 -48277725 + MIR SINE MIR 13 152 -110 1756 175 3 13 chr10 92039040 92039355 -48277410 - AluJb SINE Alu 0 312 1 537 241 56 144 chr10 92039355 92039454 -48277311 + MIR SINE MIR 152 258 -4 230 248 80 16 chr10 92039815 92039940 -48276825 - L1ME4a LINE L1 -3 6118 5986 375 300 127 6 chr10 92039976 92040323 -48276442 - L1ME4a LINE L1 -201 5920 5532 221 208 0 38 chr10 92040466 92040519 -48276246 + CT-rich Low_complexity Low_complexity 4 54 0 242 181 181 14 chr10 92041142 92041214 -48275551 + LTR67 LTR ERVL 457 540 -17 187 214 243 0 chr10 92041555 92041625 -48275140 - MIR SINE MIR -1 261 175 327 348 94 6 chr10 92041729 92041910 -48274855 + MIR SINE MIR 15 211 -51 594 332 19 0 chr10 92041965 92042170 -48274595 + LTR33 LTR ERVL 7 215 -306 371 259 54 0 chr10 92042225 92042337 -48274428 + LTR33 LTR ERVL 304 421 -100 290 198 236 0 chr10 92042340 92042446 -48274319 + MER94 DNA DNA 4 134 0 1484 181 3 24 chr10 92042575 92042890 -48273875 + AluJb SINE Alu 1 309 0 313 368 75 9 chr10 92043349 92043561 -48273204 + L2 LINE L2 2411 2636 -678 202 308 0 15 chr10 92046079 92046144 -48270621 + T-rich Low_complexity Low_complexity 3 66 0 235 289 24 60 chr10 92046254 92046337 -48270428 + MIR SINE MIR 183 262 0 2227 54 7 7 chr10 92046450 92046758 -48270007 - AluY SINE Alu 0 309 2 423 239 0 28 chr10 92046766 92046875 -48269890 - MIR SINE MIR -51 211 106 373 240 163 8 chr10 92046944 92047073 -48269692 - MIR SINE MIR -111 151 3 201 147 0 0 chr10 92047567 92047601 -48269164 + (TG)n Simple_repeat Simple_repeat 2 35 0 454 246 16 25 chr10 92047883 92048005 -48268760 - MER5A DNA MER1_type -1 188 68 264 306 8 33 chr10 92047904 92048025 -48268740 + MER5A DNA MER1_type 34 151 -38 * 688 301 81 4 chr10 92049051 92049287 -48267478 + MIR SINE MIR 9 262 0 244 341 61 30 chr10 92050081 92050245 -48266520 - L2 LINE L2 -458 2856 2688 237 340 69 40 chr10 92050590 92050966 -48265799 - L2 LINE L2 -454 2860 2474 413 304 25 17 chr10 92051238 92051386 -48265379 + MIR SINE MIR 14 162 -46 427 306 61 14 chr10 92051518 92051665 -48265100 - MIR SINE MIR -87 175 22 511 258 31 8 chr10 92051734 92051862 -48264903 + MER91A DNA MER1_type 36 166 -30 287 224 16 32 chr10 92052284 92052409 -48264356 + GA-rich Low_complexity Low_complexity 3 125 0 26 50 0 0 chr10 92053310 92053350 -48263415 + AT_rich Low_complexity Low_complexity 1 40 0 305 296 116 32 chr10 92053363 92053552 -48263213 - MIR SINE MIR -29 233 29 285 279 15 0 chr10 92054226 92054294 -48262471 + MER5B DNA MER1_type 61 129 -49 212 111 22 0 chr10 92055262 92055307 -48261458 + T-rich Low_complexity Low_complexity 4 49 0 2226 100 13 13 chr10 92055745 92056055 -48260710 + AluY SINE Alu 2 311 0 194 293 65 73 chr10 92057235 92057358 -48259407 - MIR SINE MIR -11 251 130 21 0 0 0 chr10 92057371 92057392 -48259373 + AT_rich Low_complexity Low_complexity 1 21 0 1494 201 4 4 chr10 92057431 92057695 -48259070 - AluJo SINE Alu -48 264 1 226 290 80 50 chr10 92057885 92057985 -48258780 - MIR SINE MIR -29 233 131 1714 168 124 21 chr10 92058039 92058427 -48258338 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr10 92059063 92059086 -48257679 + AT_rich Low_complexity Low_complexity 1 23 0 321 270 130 9 chr10 92059656 92059771 -48256994 - MIR SINE MIR -74 188 60 2571 267 37 35 chr10 92059775 92060497 -48256268 + L1PA15 LINE L1 1 724 -6063 * 10240 244 22 10 chr10 92060478 92063816 -48252949 + L1PA15 LINE L1 1281 4669 -2128 5460 78 0 14 chr10 92063808 92064550 -48252215 + L1PA8A LINE L1 5373 6104 -27 * 1828 136 0 0 chr10 92064551 92064808 -48251957 + AluSx SINE Alu 47 303 -9 6208 188 10 4 chr10 92064815 92066994 -48249771 + L1PA15 LINE L1 4644 6816 0 199 0 65 0 chr10 92067075 92067106 -48249659 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 718 188 8 0 chr10 92067578 92067695 -48249070 - FLAM_C SINE Alu -15 118 1 447 246 70 14 chr10 92067958 92068100 -48248665 - MLT1K LTR MaLR -280 308 159 697 233 13 7 chr10 92068979 92069129 -48247636 + MLT1E LTR MaLR 9 159 -434 1698 256 43 13 chr10 92069134 92069186 -48247579 + MLT1E LTR MaLR 119 168 -425 1817 121 0 0 chr10 92069186 92069435 -48247330 + AluSx SINE Alu 1 249 -63 1698 256 43 13 chr10 92069435 92069842 -48246923 + MLT1E LTR MaLR 168 592 -1 203 114 45 34 chr10 92069867 92069955 -48246810 + (TTATA)n Simple_repeat Simple_repeat 3 91 0 32 0 0 0 chr10 92070032 92070064 -48246701 + AT_rich Low_complexity Low_complexity 1 32 0 511 252 70 2 chr10 92070119 92070316 -48246449 - L1MEc LINE L1 -4959 1646 1305 475 327 121 9 chr10 92070901 92071124 -48245641 - MIR SINE MIR -14 248 1 1814 157 68 3 chr10 92071237 92071574 -48245191 - MER46B DNA MER2_type -1 235 2 21 0 0 0 chr10 92071597 92071618 -48245147 + AT_rich Low_complexity Low_complexity 1 21 0 238 250 0 0 chr10 92071653 92071705 -48245060 - L2 LINE L2 -252 3061 3010 1452 160 40 13 chr10 92071970 92072282 -48244483 - THE1C LTR MaLR -28 347 1 742 151 56 11 chr10 92072283 92072462 -48244303 + Charlie5 DNA MER1_type 2398 2584 -28 28 61 0 0 chr10 92072902 92072951 -48243814 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr10 92074525 92074549 -48242216 + AT_rich Low_complexity Low_complexity 1 24 0 204 225 42 35 chr10 92074659 92074801 -48241964 + (TATAA)n Simple_repeat Simple_repeat 5 147 0 657 283 75 17 chr10 92076327 92076567 -48240198 + MIR SINE MIR 9 262 0 580 320 105 5 chr10 92076758 92076958 -48239807 - MIR SINE MIR -10 252 33 702 24 0 0 chr10 92077889 92077973 -48238792 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 345 169 42 0 chr10 92079326 92079397 -48237368 - MER53 DNA DNA -3 186 113 775 245 57 14 chr10 92079639 92079851 -48236914 - MIR SINE MIR -40 222 2 698 294 16 32 chr10 92080140 92080388 -48236377 + MIR SINE MIR 5 248 -14 270 116 0 0 chr10 92080515 92080558 -48236207 + (TC)n Simple_repeat Simple_repeat 1 43 0 398 209 104 43 chr10 92081068 92081183 -48235582 - L2 LINE L2 -3 3310 3189 301 307 139 35 chr10 92081867 92082069 -48234696 - MIR SINE MIR -9 253 31 231 208 21 0 chr10 92082143 92082191 -48234574 + GA-rich Low_complexity Low_complexity 1 49 0 341 329 79 7 chr10 92083533 92083673 -48233092 - MIR SINE MIR -1 261 112 303 244 139 26 chr10 92083947 92084062 -48232703 - MER20B DNA MER1_type -642 141 14 384 22 0 0 chr10 92084154 92084199 -48232566 + (CA)n Simple_repeat Simple_repeat 2 46 0 203 260 0 0 chr10 92085187 92085237 -48231528 + (TG)n Simple_repeat Simple_repeat 1 50 0 203 330 27 54 chr10 92085754 92085866 -48230899 - L2 LINE L2 -641 2673 2565 338 221 47 31 chr10 92086827 92086954 -48229811 - L1 LINE L1 -806 5340 5212 5624 160 26 11 chr10 92087271 92088854 -48227911 - L1MA4 LINE L1 -8 6292 4687 2373 134 4 26 chr10 92088852 92089308 -48227457 + L1MA4 LINE L1 4222 4667 -1479 * 413 318 21 48 chr10 92090060 92090249 -48226516 - MIR SINE MIR -54 208 25 24 0 0 0 chr10 92091331 92091355 -48225410 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 92091414 92091440 -48225325 + AT_rich Low_complexity Low_complexity 1 26 0 303 202 76 50 chr10 92091440 92091559 -48225206 - L1ME4a LINE L1 -30 6091 5970 26 0 0 0 chr10 92092124 92092150 -48224615 + AT_rich Low_complexity Low_complexity 1 26 0 521 255 14 7 chr10 92092152 92092297 -48224468 - L1ME1 LINE L1 -9 6157 6012 398 252 35 17 chr10 92092789 92092904 -48223861 + L2 LINE L2 3196 3312 -1 389 356 101 19 chr10 92093160 92093477 -48223288 + L2 LINE L2 1817 2159 -1155 249 353 39 0 chr10 92095237 92095339 -48221426 - L2 LINE L2 -556 2758 2653 237 277 48 39 chr10 92095565 92095771 -48220994 + L1ME4a LINE L1 5830 6037 -84 286 249 11 2 chr10 92095788 92095895 -48220870 + L1ME3A LINE L1 5821 5926 -244 2074 102 3 40 chr10 92096601 92096904 -48219861 - AluSq SINE Alu -21 292 1 1289 216 79 23 chr10 92096999 92097342 -48219423 - L1MD1 LINE L1 -160 6082 5721 1448 77 50 9 chr10 92098162 92098384 -48218381 + L1MA3 LINE L1 6075 6305 0 22 0 0 0 chr10 92098694 92098716 -48218049 + AT_rich Low_complexity Low_complexity 1 22 0 257 330 0 27 chr10 92098972 92099084 -48217681 - HAL1b LINE L1 -862 486 378 275 212 24 24 chr10 92099728 92099813 -48216952 + (TATG)n Simple_repeat Simple_repeat 3 87 0 269 309 49 0 chr10 92100223 92100304 -48216461 + MIR3 SINE MIR 83 167 -41 1902 153 0 3 chr10 92100494 92100776 -48215989 + AluSx SINE Alu 16 296 -16 260 293 17 0 chr10 92101300 92101358 -48215407 - L2 LINE L2 -23 3290 3232 861 146 120 31 chr10 92103597 92103789 -48212976 - MER3 DNA MER1_type 0 209 1 330 263 111 41 chr10 92103990 92104161 -48212604 + MIR SINE MIR 66 248 -14 968 237 80 86 chr10 92104779 92105191 -48211574 + MER113 DNA MER1_type? 1 411 -110 2083 170 124 18 chr10 92105191 92105643 -48211122 + MLT1D LTR MaLR 4 503 -2 968 237 80 86 chr10 92105643 92105754 -48211011 + MER113 DNA MER1_type? 411 521 0 307 280 105 46 chr10 92106148 92106473 -48210292 - L1ME4a LINE L1 -67 6054 5711 1471 180 12 64 chr10 92106869 92107197 -48209568 + AluJb SINE Alu 1 311 -1 529 296 104 5 chr10 92107692 92107917 -48208848 - MIR SINE MIR 0 262 19 624 36 0 24 chr10 92107969 92108053 -48208712 - L1PA5 LINE L1 -6 6148 6067 777 42 0 0 chr10 92108053 92108149 -48208616 + L1PA5 LINE L1 5875 5970 -184 201 222 0 0 chr10 92108891 92108936 -48207829 + MIR SINE MIR 92 136 -72 406 289 57 19 chr10 92110346 92110505 -48206260 - MER5A DNA MER1_type 0 189 25 1084 164 50 10 chr10 92110923 92111124 -48205641 - MER20 DNA MER1_type 0 219 11 181 274 16 32 chr10 92111134 92111196 -48205569 + MIR SINE MIR 90 150 -58 560 292 87 30 chr10 92111575 92112101 -48204664 + L1ME LINE L1 5258 5817 -304 266 282 10 0 chr10 92112158 92112261 -48204504 + (TA)n Simple_repeat Simple_repeat 1 104 0 38 0 0 0 chr10 92112378 92112416 -48204349 + AT_rich Low_complexity Low_complexity 1 38 0 233 284 0 54 chr10 92112416 92112490 -48204275 + MIR3 SINE MIR 139 208 0 1887 184 7 0 chr10 92112517 92112827 -48203938 + AluJb SINE Alu 1 312 0 343 259 224 11 chr10 92112910 92113084 -48203681 - MIR SINE MIR -13 249 39 494 284 111 0 chr10 92113258 92113420 -48203345 - MIR SINE MIR -19 243 64 2199 49 46 0 chr10 92114040 92114324 -48202441 - THE1B-int LTR MaLR -1283 297 1 1959 132 88 18 chr10 92114324 92114664 -48202101 - THE1B LTR MaLR 0 364 1 2358 87 7 0 chr10 92115728 92116027 -48200738 - AluSq SINE Alu -12 301 1 232 343 164 15 chr10 92116683 92116817 -48199948 + MIR3 SINE MIR 38 191 -17 6975 39 2 0 chr10 92117442 92118280 -48198485 + L1PA5 LINE L1 5304 6143 -11 294 221 49 107 chr10 92119283 92119405 -48197360 + MIR3 SINE MIR 2 123 -85 180 0 0 0 chr10 92119750 92119770 -48196995 + (T)n Simple_repeat Simple_repeat 1 20 0 337 352 37 6 chr10 92119884 92120046 -48196719 - MIR SINE MIR -91 171 5 1771 187 56 41 chr10 92120708 92121138 -48195627 + MER66A LTR ERV1 97 476 -2 344 393 131 17 chr10 92121211 92121570 -48195195 - L2 LINE L2 0 3272 2873 242 180 16 0 chr10 92121587 92121648 -48195117 - L1ME4a LINE L1 0 6121 6060 243 240 10 31 chr10 92121772 92121868 -48194897 - L1ME4a LINE L1 -235 5886 5793 1236 283 51 11 chr10 92121889 92122260 -48194505 - LTR16A LTR ERVL -5 445 60 808 215 62 0 chr10 92122636 92122813 -48193952 + MER5A DNA MER1_type 1 188 -1 2169 104 0 20 chr10 92122821 92123119 -48193646 - AluSc SINE Alu -17 292 1 678 317 8 42 chr10 92123226 92123485 -48193280 - MIR SINE MIR -5 257 8 188 231 77 0 chr10 92123963 92124015 -48192750 - MER5A DNA MER1_type -99 90 35 * 213 250 73 29 chr10 92123970 92124038 -48192727 + MER5A DNA MER1_type 119 189 0 812 204 68 11 chr10 92124046 92124222 -48192543 - MER5A DNA MER1_type 0 189 4 236 333 40 10 chr10 92124226 92124325 -48192440 - MIR3 SINE MIR -49 159 58 2249 99 0 0 chr10 92125041 92125385 -48191380 - AluSp SINE Alu 0 344 1 338 247 196 77 chr10 92125619 92125813 -48190952 - MIR SINE MIR -31 231 15 1058 292 71 20 chr10 92125925 92126333 -48190432 + L2 LINE L2 2881 3309 -4 351 270 87 32 chr10 92127333 92127459 -48189306 - MIR SINE MIR -35 227 95 3003 224 106 38 chr10 92127747 92128650 -48188115 - L1MC4 LINE L1 -2 8040 7055 183 80 0 0 chr10 92128650 92128675 -48188090 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 3003 224 106 38 chr10 92128675 92128812 -48187953 - L1MC4 LINE L1 -987 7055 6929 428 277 54 31 chr10 92129038 92129168 -48187597 - MIR SINE MIR -118 144 12 2149 107 31 50 chr10 92129798 92130180 -48186585 - THE1C LTR MaLR 0 375 1 1289 302 35 5 chr10 92132051 92132428 -48184337 - LTR16A LTR ERVL -7 443 56 474 319 54 6 chr10 92132510 92132676 -48184089 - MIR SINE MIR -61 201 28 258 381 35 30 chr10 92134387 92134584 -48182181 + MIR3 SINE MIR 10 207 -1 22 0 0 0 chr10 92135008 92135030 -48181735 + AT_rich Low_complexity Low_complexity 1 22 0 2019 118 10 17 chr10 92135031 92135319 -48181446 - AluSx SINE Alu -26 286 1 196 233 151 14 chr10 92135436 92135509 -48181256 - MIR3 SINE MIR -1 207 125 25 51 0 0 chr10 92136024 92136063 -48180702 + AT_rich Low_complexity Low_complexity 1 39 0 296 287 93 23 chr10 92136136 92136265 -48180500 - MIR SINE MIR -111 151 14 313 169 46 0 chr10 92138312 92138377 -48178388 + MER63 DNA MER1_type 660 727 -334 887 150 0 0 chr10 92138677 92138810 -48177955 - FLAM_A SINE Alu 0 133 1 2563 37 0 3 chr10 92139675 92139975 -48176790 + AluY SINE Alu 2 300 -11 525 191 0 0 chr10 92140739 92140823 -48175942 - FLAM_A SINE Alu -58 84 1 243 0 0 0 chr10 92141114 92141141 -48175624 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 288 0 0 0 chr10 92141140 92141172 -48175593 + (CA)n Simple_repeat Simple_repeat 1 32 0 640 246 161 19 chr10 92141670 92141881 -48174884 - MIR SINE MIR -12 250 10 441 246 98 0 chr10 92142420 92142542 -48174223 + MER5A DNA MER1_type 5 138 -51 * 743 313 66 60 chr10 92142541 92143094 -48173671 + L2 LINE L2 2722 3271 -1 764 260 78 77 chr10 92145516 92145897 -48170868 - L1ME4a LINE L1 0 6121 5737 1767 169 0 38 chr10 92145897 92146217 -48170548 - AluJo SINE Alu -4 308 1 764 260 78 77 chr10 92146217 92146423 -48170342 - L1ME4a LINE L1 -384 5737 5533 182 105 26 0 chr10 92146543 92146581 -48170184 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 260 222 16 16 chr10 92147636 92147699 -48169066 + GA-rich Low_complexity Low_complexity 5 67 0 21 57 0 0 chr10 92148238 92148273 -48168492 + AT_rich Low_complexity Low_complexity 1 35 0 202 321 37 37 chr10 92148737 92148818 -48167947 - L2 LINE L2 -71 3201 3121 340 363 25 88 chr10 92148934 92149367 -48167398 + L2 LINE L2 2852 3257 -15 197 339 0 0 chr10 92149397 92149456 -48167309 + MIR SINE MIR 204 262 0 339 327 44 13 chr10 92150023 92150182 -48166583 + MIR3 SINE MIR 39 202 -6 578 249 45 69 chr10 92150684 92150781 -48165984 + MER102a DNA MER1_type 61 159 -1258 2037 105 46 26 chr10 92150781 92151087 -48165678 + AluSx SINE Alu 1 312 0 578 249 45 69 chr10 92151087 92151234 -48165531 + MER102a DNA MER1_type 159 299 -31 1895 122 36 24 chr10 92151491 92151865 -48164900 - Tigger3(Golem) DNA MER2_type -1 3028 2 456 233 34 123 chr10 92152347 92152493 -48164272 + L2 LINE L2 3138 3270 -2 500 276 79 0 chr10 92152551 92152703 -48164062 - MIR SINE MIR -75 187 24 701 280 65 16 chr10 92153230 92153485 -48163280 + MIR SINE MIR 3 262 0 2582 95 19 6 chr10 92153781 92154140 -48162625 + THE1B LTR MaLR 1 364 0 208 234 0 0 chr10 92155084 92155131 -48161634 + MER91 DNA MER1_type 78 124 -16 325 294 251 5 chr10 92155168 92155355 -48161410 + L2 LINE L2 2828 3060 -253 590 249 28 44 chr10 92155944 92156125 -48160640 + MER5B DNA MER1_type 1 178 0 411 297 103 0 chr10 92157516 92157661 -48159104 + MER63A DNA MER1_type 42 201 -9 844 238 127 13 chr10 92157811 92158118 -48158647 + MER93a LTR ERV1 61 402 0 535 292 137 13 chr10 92158311 92158537 -48158228 - MIR SINE MIR 0 262 9 241 235 49 37 chr10 92158633 92158714 -48158051 - L2 LINE L2 -4 3268 3187 677 274 93 30 chr10 92160194 92160524 -48156241 - L2 LINE L2 -266 3047 2697 1148 303 110 11 chr10 92161451 92162061 -48154704 + L2 LINE L2 2152 2821 -493 10877 145 31 29 chr10 92162071 92163383 -48153382 - Tigger4(Zombi) DNA MER2_type -830 1901 582 2203 129 0 0 chr10 92163383 92163686 -48153079 - AluSx SINE Alu -9 303 1 10877 145 31 29 chr10 92163686 92164267 -48152498 - Tigger4(Zombi) DNA MER2_type -2149 582 4 231 167 0 0 chr10 92164267 92164309 -48152456 + (TA)n Simple_repeat Simple_repeat 2 43 0 241 102 68 34 chr10 92164309 92164368 -48152397 - LTR66 LTR ERVL -171 439 379 216 176 0 59 chr10 92164368 92164419 -48152346 + L2 LINE L2 3266 3313 0 356 333 85 12 chr10 92164729 92164894 -48151871 - MIR3 SINE MIR -2 206 30 333 100 0 0 chr10 92165116 92165166 -48151599 + (TG)n Simple_repeat Simple_repeat 1 50 0 725 236 66 11 chr10 92165661 92165843 -48150922 + MIR SINE MIR 71 262 0 223 262 243 10 chr10 92166457 92166560 -48150205 + MER5A DNA MER1_type 63 189 0 326 325 11 48 chr10 92166578 92166766 -48149999 + MER5A DNA MER1_type 7 187 -2 3087 151 15 2 chr10 92168617 92169135 -48147630 + LTR45 LTR ERV1 1 525 0 379 160 264 0 chr10 92169928 92170034 -48146731 + MER53 DNA DNA 8 141 -48 918 171 34 6 chr10 92170064 92170239 -48146526 + MER20 DNA MER1_type 39 218 -1 4407 136 13 27 chr10 92170814 92171399 -48145366 - MER50 LTR ERV1 -27 707 115 306 0 0 0 chr10 92171399 92171433 -48145332 + (TA)n Simple_repeat Simple_repeat 1 34 0 2090 115 28 0 chr10 92171434 92171721 -48145044 - AluSx SINE Alu -17 295 1 4407 136 13 27 chr10 92171721 92171848 -48144917 - MER50 LTR ERV1 -618 116 3 651 326 29 16 chr10 92171857 92172099 -48144666 - L2 LINE L2 -564 2750 2506 261 314 118 25 chr10 92172107 92172211 -48144554 + LTR50 LTR ERVL 7 100 -695 2001 196 9 48 chr10 92172211 92172671 -48144094 + LTR47B LTR ERVL 1 442 -1 261 314 118 25 chr10 92172671 92172770 -48143995 + LTR50 LTR ERVL 100 229 -566 875 243 187 11 chr10 92172818 92173176 -48143589 + LTR50 LTR ERVL 344 764 -31 441 317 65 50 chr10 92173204 92173526 -48143239 - L2 LINE L2 -773 2541 2215 1092 236 33 22 chr10 92173890 92174161 -48142604 - MER93b LTR ERV1 -2 371 98 209 283 39 122 chr10 92175901 92175924 -48140841 - MER5A DNA MER1_type -18 171 148 2098 120 3 3 chr10 92175924 92176225 -48140540 + AluSg SINE Alu 1 301 -9 209 283 39 122 chr10 92176225 92176381 -48140384 - MER5A DNA MER1_type -41 148 7 283 243 29 14 chr10 92176804 92176874 -48139891 + MER106B DNA MER1_type 1 71 -988 382 244 52 67 chr10 92176912 92177105 -48139660 - MER34 LTR ERV1 0 542 353 326 224 0 0 chr10 92177436 92177510 -48139255 - MER34C LTR ERV1 -468 101 1 499 184 32 16 chr10 92177510 92177635 -48139130 + MER106B DNA MER1_type 933 1059 0 973 252 18 18 chr10 92177782 92178008 -48138757 - MIR SINE MIR -32 230 5 203 392 10 0 chr10 92178203 92178305 -48138460 - MIR SINE MIR 0 262 160 472 325 10 36 chr10 92178352 92178546 -48138219 - MIR SINE MIR 0 262 74 308 292 18 88 chr10 92179521 92179617 -48137148 + MIR SINE MIR 60 140 -122 751 214 0 0 chr10 92179617 92179743 -48137022 + FLAM_A SINE Alu 1 126 -7 308 292 18 88 chr10 92179743 92179817 -48136948 + MIR SINE MIR 140 218 -44 707 260 23 17 chr10 92179893 92180070 -48136695 + MLT1H LTR MaLR 116 293 -256 189 253 211 0 chr10 92180233 92180328 -48136437 + L3 LINE CR1 1454 1568 -9 210 245 0 0 chr10 92180684 92180733 -48136032 - L2 LINE L2 0 3313 3265 1649 269 60 15 chr10 92180759 92181354 -48135411 + L1ME3A LINE L1 5536 6157 -13 315 0 0 0 chr10 92181361 92181396 -48135369 + (CA)n Simple_repeat Simple_repeat 2 36 0 519 316 147 62 chr10 92182042 92182286 -48134479 + LTR67 LTR ERVL 50 272 -285 1606 235 64 20 chr10 92182286 92182724 -48134041 - LTR40b LTR ERVL -3 459 3 519 316 147 62 chr10 92182724 92182947 -48133818 + LTR67 LTR ERVL 272 557 0 276 244 47 35 chr10 92183684 92183770 -48132995 - MIR3 SINE MIR -7 201 115 2863 77 51 19 chr10 92184115 92184156 -48132609 - MLT2A1 LTR ERVL 0 444 406 270 0 0 0 chr10 92184156 92184186 -48132579 + (CA)n Simple_repeat Simple_repeat 2 31 0 2863 77 51 19 chr10 92184186 92184574 -48132191 - MLT2A1 LTR ERVL -38 406 1 540 303 43 11 chr10 92184979 92185164 -48131601 - MIR SINE MIR -16 246 56 333 295 93 51 chr10 92185256 92185493 -48131272 + L1ME4a LINE L1 5838 6084 -37 26 50 0 0 chr10 92186044 92186084 -48130681 + AT_rich Low_complexity Low_complexity 1 40 0 419 301 115 11 chr10 92186663 92186846 -48129919 - MIR SINE MIR -48 214 13 6578 72 12 10 chr10 92187046 92188213 -48128552 - L1PA7 LINE L1 0 6154 4989 298 339 28 9 chr10 92188293 92188402 -48128363 + MIR3 SINE MIR 91 201 -7 21 0 0 0 chr10 92188568 92188589 -48128176 + AT_rich Low_complexity Low_complexity 1 21 0 1374 225 60 9 chr10 92188778 92189112 -48127653 + MLT1A2 LTR MaLR 24 374 0 193 280 187 53 chr10 92189794 92189944 -48126821 - MIR SINE MIR -26 236 67 1404 206 92 48 chr10 92190217 92190718 -48126047 - Charlie1b DNA MER1_type 0 523 1 1492 174 87 14 chr10 92191637 92191925 -48124840 - AluJb SINE Alu -1 311 3 229 253 105 0 chr10 92192114 92192209 -48124556 - L1ME LINE L1 -201 5920 5816 269 289 80 40 chr10 92192223 92192424 -48124341 - L1ME LINE L1 -416 5705 5497 487 258 76 61 chr10 92195034 92195298 -48121467 - Charlie8 DNA MER1_type -997 1420 55 271 299 58 11 chr10 92195371 92195458 -48121307 - MIR SINE MIR -78 130 40 280 301 0 14 chr10 92195649 92195722 -48121043 + MIR SINE MIR 50 121 -141 207 0 0 0 chr10 92195731 92195754 -48121011 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 227 241 0 17 chr10 92196305 92196363 -48120402 + G-rich Low_complexity Low_complexity 1 57 0 193 296 0 0 chr10 92198938 92198982 -48117783 + L2 LINE L2 3268 3311 -2 2806 43 9 0 chr10 92198998 92199344 -48117421 - L1PA5 LINE L1 -2 6152 5804 197 0 0 122 chr10 92199463 92199512 -48117253 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 296 269 13 0 chr10 92200767 92200845 -48115920 - MER117 DNA MER1_type -40 157 79 243 254 17 0 chr10 92200868 92200927 -48115838 - MIR SINE MIR -2 260 201 675 249 37 16 chr10 92200977 92201166 -48115599 + MIR SINE MIR 70 262 0 422 336 87 34 chr10 92201124 92201332 -48115433 - MIR SINE MIR -34 228 10 * 214 194 75 90 chr10 92201348 92201415 -48115350 - L2 LINE L2 -48 3265 3200 21 0 0 0 chr10 92203450 92203471 -48113294 + AT_rich Low_complexity Low_complexity 1 21 0 273 211 8 149 chr10 92203610 92203679 -48113086 - MER5A DNA MER1_type -62 120 86 1680 170 36 14 chr10 92203679 92203956 -48112809 - AluJb SINE Alu -25 287 5 273 211 8 149 chr10 92203956 92204027 -48112738 - MER5A DNA MER1_type -96 86 7 347 314 57 14 chr10 92204820 92204960 -48111805 - MIR SINE MIR -98 164 19 246 283 75 46 chr10 92204973 92205213 -48111552 - L1ME4a LINE L1 -3 6118 5872 1416 229 55 8 chr10 92205765 92206145 -48110620 - L1MC4a LINE L1 -1 7807 7410 514 329 29 67 chr10 92206312 92206790 -48109975 - L2 LINE L2 -461 2853 2394 903 201 137 33 chr10 92207498 92207827 -48108938 + L1MC4 LINE L1 7120 7482 -560 260 270 230 10 chr10 92208356 92208456 -48108309 - MER5A DNA MER1_type 0 189 68 198 186 20 167 chr10 92208422 92208463 -48108302 + MER5A DNA MER1_type 102 121 -68 * 390 74 0 0 chr10 92208463 92208517 -48108248 + (TG)n Simple_repeat Simple_repeat 1 54 0 198 186 20 167 chr10 92208517 92208577 -48108188 + MER5A DNA MER1_type 121 188 -1 2263 106 3 0 chr10 92209598 92209891 -48106874 + AluSq SINE Alu 1 294 -19 292 291 179 22 chr10 92210066 92210200 -48106565 + MIR SINE MIR 3 157 -105 21 82 0 0 chr10 92210967 92211016 -48105749 + AT_rich Low_complexity Low_complexity 1 49 0 651 284 83 16 chr10 92211147 92211460 -48105305 - MLT1L LTR MaLR -79 536 203 307 320 76 35 chr10 92211746 92211918 -48104847 - MIR SINE MIR -64 198 20 303 122 0 0 chr10 92212965 92213014 -48103751 + (CA)n Simple_repeat Simple_repeat 1 49 0 219 324 76 29 chr10 92213818 92213923 -48102842 - MIR SINE MIR -127 135 26 647 145 46 8 chr10 92214240 92214371 -48102394 - Charlie1 DNA MER1_type -2 2759 2624 697 208 71 0 chr10 92214398 92214552 -48102213 - Charlie1 DNA MER1_type -2596 165 1 475 349 128 12 chr10 92214974 92215301 -48101464 + LTR67 LTR ERVL 101 465 -92 254 330 60 43 chr10 92215383 92215568 -48101197 + MER5A DNA MER1_type 1 188 -1 2188 116 0 0 chr10 92215656 92215948 -48100817 - AluSx SINE Alu -20 292 1 223 243 200 0 chr10 92216372 92216442 -48100323 - MIR3 SINE MIR -6 202 119 321 259 0 12 chr10 92216582 92216663 -48100102 + MIR SINE MIR 82 161 -101 * 702 281 65 41 chr10 92216652 92216832 -48099933 - MIR SINE MIR 0 262 73 1168 282 85 37 chr10 92216832 92217396 -48099369 - MLT1E LTR MaLR -2 591 1 702 281 65 41 chr10 92217396 92217461 -48099304 - MIR SINE MIR -189 73 11 2276 90 3 3 chr10 92218708 92219007 -48097758 - AluY SINE Alu -12 299 1 21 36 0 0 chr10 92219212 92219240 -48097525 + AT_rich Low_complexity Low_complexity 1 28 0 651 236 39 34 chr10 92220383 92220561 -48096204 - MER5A DNA MER1_type -3 186 8 717 246 64 15 chr10 92220576 92220779 -48095986 + MER58A DNA MER1_type 1 213 -11 1229 161 71 33 chr10 92222630 92222755 -48094010 - L1MA8 LINE L1 0 6300 6181 1891 144 18 0 chr10 92222755 92223039 -48093726 - AluJb SINE Alu -23 289 1 1229 161 71 33 chr10 92223039 92223303 -48093462 - L1MA8 LINE L1 -119 6181 5863 352 298 32 8 chr10 92223746 92223870 -48092895 + MIR3 SINE MIR 77 203 -5 202 276 29 95 chr10 92223907 92224012 -48092753 + MIR SINE MIR 106 203 -59 498 250 9 9 chr10 92224107 92224219 -48092546 - L2 LINE L2 0 3313 3202 2185 103 4 0 chr10 92225735 92226039 -48090726 - AluSx SINE Alu 0 305 1 438 285 8 39 chr10 92226342 92226472 -48090293 + MIR3 SINE MIR 37 162 -46 238 350 21 50 chr10 92226475 92226615 -48090150 - MER5A DNA MER1_type -6 183 48 490 196 0 11 chr10 92228258 92228350 -48088415 + MER5A DNA MER1_type 16 106 -83 298 367 67 22 chr10 92228436 92228616 -48088149 - MER5A DNA MER1_type 0 189 2 1019 162 44 20 chr10 92228691 92228895 -48087870 + MER3 DNA MER1_type 1 209 0 27 29 0 0 chr10 92230465 92230499 -48086266 + AT_rich Low_complexity Low_complexity 1 34 0 192 40 0 0 chr10 92230808 92230833 -48085932 + (TA)n Simple_repeat Simple_repeat 1 25 0 573 308 51 71 chr10 92231710 92232119 -48084646 - L2 LINE L2 -1 3271 2871 223 410 0 0 chr10 92233448 92233526 -48083239 + MIR SINE MIR 38 115 -93 7005 39 2 0 chr10 92234207 92235045 -48081720 + L1PA5 LINE L1 5304 6143 -11 295 221 49 107 chr10 92236048 92236170 -48080595 + MIR3 SINE MIR 2 123 -85 189 0 0 0 chr10 92236515 92236536 -48080229 + (T)n Simple_repeat Simple_repeat 1 21 0 343 346 37 6 chr10 92236650 92236812 -48079953 - MIR SINE MIR -91 171 5 1802 187 56 41 chr10 92237475 92237905 -48078860 + MER66A LTR ERV1 97 476 -2 324 317 32 16 chr10 92237986 92238109 -48078656 - L2 LINE L2 -9 3304 3180 258 182 15 0 chr10 92238353 92238420 -48078345 - HAL1b LINE L1 0 6121 1291 225 248 26 26 chr10 92238521 92238634 -48078131 - L1ME LINE L1 -216 5905 5793 1197 275 57 16 chr10 92238655 92239026 -48077739 - LTR16A LTR ERVL -5 445 60 881 215 62 0 chr10 92239402 92239579 -48077186 + MER5A DNA MER1_type 1 188 -1 2214 101 0 20 chr10 92239587 92239885 -48076880 - AluSc SINE Alu -17 292 1 636 320 8 42 chr10 92239992 92240251 -48076514 - MIR SINE MIR -5 257 8 192 231 77 0 chr10 92240729 92240781 -48075984 - MER5A DNA MER1_type -99 90 35 * 215 250 73 29 chr10 92240736 92240804 -48075961 + MER5A DNA MER1_type 119 189 0 886 204 68 11 chr10 92240812 92240988 -48075777 - MER5A DNA MER1_type 0 189 4 228 333 40 10 chr10 92240992 92241091 -48075674 - MIR3 SINE MIR -49 159 58 2254 99 0 0 chr10 92241808 92242137 -48074628 - AluSp SINE Alu 0 329 1 320 247 196 77 chr10 92242371 92242565 -48074200 - MIR SINE MIR -31 231 15 1089 282 73 22 chr10 92242678 92243086 -48073679 + L2 LINE L2 2881 3309 -4 366 270 87 32 chr10 92244087 92244213 -48072552 - MIR SINE MIR -35 227 95 3197 219 106 38 chr10 92244499 92245404 -48071361 - L1MC4 LINE L1 0 8042 7055 183 80 0 0 chr10 92245404 92245429 -48071336 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 3197 219 106 38 chr10 92245429 92245566 -48071199 - L1MC4 LINE L1 -987 7055 6929 418 277 54 31 chr10 92245792 92245922 -48070843 - MIR SINE MIR -118 144 12 2337 107 31 50 chr10 92246552 92246934 -48069831 - THE1C LTR MaLR 0 375 1 1276 299 42 5 chr10 92248805 92249189 -48067576 - LTR16A LTR ERVL -7 443 46 454 319 54 6 chr10 92249264 92249430 -48067335 - MIR SINE MIR -61 201 28 228 381 35 30 chr10 92251141 92251338 -48065427 + MIR3 SINE MIR 10 207 -1 2055 125 10 22 chr10 92251762 92252073 -48064692 - AluSx SINE Alu -5 307 1 188 233 151 14 chr10 92252190 92252263 -48064502 - MIR3 SINE MIR -1 207 125 289 287 101 31 chr10 92252890 92253019 -48063746 - MIR SINE MIR -111 151 14 313 162 44 0 chr10 92255064 92255132 -48061633 + MER63 DNA MER1_type 656 726 -334 826 188 0 0 chr10 92255428 92255587 -48061178 - FLAM_A SINE Alu 0 159 1 1254 135 34 24 chr10 92256068 92256275 -48060490 - AluSx SINE Alu -66 246 38 2377 76 0 10 chr10 92256284 92256585 -48060180 - AluY SINE Alu -13 298 1 961 122 50 22 chr10 92257878 92258058 -48058707 + L1MA5A LINE L1 5990 6174 -123 2136 86 13 50 chr10 92258058 92258361 -48058404 + AluSx SINE Alu 1 292 -20 984 153 0 0 chr10 92258576 92258726 -48058039 - AluJo SINE Alu -162 150 1 366 304 39 1 chr10 92260981 92261138 -48055627 + MIR SINE MIR 38 198 -62 1420 198 20 94 chr10 92261287 92261681 -48055084 - MLT1A1 LTR MaLR 0 365 1 375 23 0 0 chr10 92261832 92261876 -48054889 + (CA)n Simple_repeat Simple_repeat 1 44 0 187 274 85 85 chr10 92261925 92262089 -48054676 + MIR SINE MIR 57 220 -42 581 261 34 23 chr10 92262682 92262858 -48053907 + MIR SINE MIR 37 214 -48 1728 168 0 48 chr10 92263392 92263701 -48053064 - AluJb SINE Alu -18 294 1 638 250 100 23 chr10 92263820 92264040 -48052725 - MIR SINE MIR -3 259 23 580 278 18 12 chr10 92264402 92264571 -48052194 + MIR SINE MIR 45 214 -48 548 281 130 26 chr10 92265305 92265536 -48051229 + MIR SINE MIR 5 259 -3 182 282 37 92 chr10 92265574 92265737 -48051028 - L3 LINE CR1 -221 1356 1203 2471 106 74 3 chr10 92268127 92268477 -48048288 + THE1C LTR MaLR 1 375 0 270 0 0 0 chr10 92269175 92269205 -48047560 + (T)n Simple_repeat Simple_repeat 1 30 0 1252 174 0 0 chr10 92269480 92269681 -48047084 - AluJo SINE Alu -18 294 94 2515 123 26 11 chr10 92269871 92270252 -48046513 + MLT1B LTR MaLR 1 387 -3 1121 240 47 42 chr10 92271002 92271361 -48045404 - MLT1A2 LTR MaLR -12 362 2 32 43 0 0 chr10 92271691 92271737 -48045028 + AT_rich Low_complexity Low_complexity 1 46 0 199 425 0 9 chr10 92272389 92272502 -48044263 + MIR3 SINE MIR 88 199 -9 2656 203 52 93 chr10 92272535 92272697 -48044068 - L1MB7 LINE L1 0 6184 6017 2385 115 48 25 chr10 92272697 92273053 -48043712 - THE1B LTR MaLR 0 364 1 2656 203 52 93 chr10 92273053 92273682 -48043083 - L1MB7 LINE L1 -167 6017 5426 1673 138 4 4 chr10 92275583 92275860 -48040905 - AluSq SINE Alu 0 315 39 366 333 60 27 chr10 92276615 92276798 -48039967 - MER5A DNA MER1_type 0 189 1 200 275 93 78 chr10 92276848 92276921 -48039844 + MIR SINE MIR 67 137 -125 863 125 0 17 chr10 92276921 92277041 -48039724 + FLAM_C SINE Alu 1 118 -15 200 275 93 78 chr10 92277041 92277160 -48039605 + MIR SINE MIR 137 262 0 209 281 90 22 chr10 92277520 92277609 -48039156 + MIR SINE MIR 119 213 -49 231 114 0 0 chr10 92277827 92277862 -48038903 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 201 170 0 64 chr10 92277922 92277969 -48038796 + (TATG)n Simple_repeat Simple_repeat 1 44 0 695 255 0 72 chr10 92278006 92278159 -48038606 + FRAM SINE Alu 5 146 -30 198 0 0 0 chr10 92278163 92278185 -48038580 + (CA)n Simple_repeat Simple_repeat 2 23 0 275 281 0 0 chr10 92278185 92278267 -48038498 + L1MC4 LINE L1 6614 6695 -1347 252 253 11 42 chr10 92278191 92278286 -48038479 - L1MC4 LINE L1 -1339 6703 6612 * 822 257 9 14 chr10 92279613 92279823 -48036942 - MIR SINE MIR -7 255 47 345 100 0 0 chr10 92279854 92279913 -48036852 - L1MD3 LINE L1 -1 7990 7726 2466 135 28 38 chr10 92279919 92280341 -48036424 + MSTB LTR MaLR 4 421 -5 639 254 113 21 chr10 92282426 92282666 -48034099 - MIR SINE MIR 0 262 1 205 294 0 44 chr10 92283426 92283494 -48033271 + L2 LINE L2 3206 3270 -2 739 225 117 42 chr10 92284253 92284493 -48032272 - MIR SINE MIR -2 260 4 181 235 59 39 chr10 92285774 92285825 -48030940 + MIR3 SINE MIR 143 194 -14 636 262 78 5 chr10 92286488 92286679 -48030086 + MIR SINE MIR 33 237 -25 612 281 11 34 chr10 92286867 92287045 -48029720 - MIR SINE MIR -70 192 19 331 290 0 0 chr10 92287593 92287686 -48029079 - MIR SINE MIR -122 140 48 692 249 31 21 chr10 92287696 92287889 -48028876 + MIR SINE MIR 2 196 -66 24 0 0 0 chr10 92289206 92289230 -48027535 + AT_rich Low_complexity Low_complexity 1 24 0 1503 147 70 70 chr10 92289647 92289946 -48026819 - AluJo SINE Alu -12 300 2 1744 161 34 3 chr10 92289950 92290241 -48026524 - AluJo SINE Alu -11 301 2 2944 20 6 0 chr10 92290296 92290642 -48026123 - L1PA4 LINE L1 -3 6152 5805 420 235 128 0 chr10 92291201 92291303 -48025462 + L2 LINE L2 3158 3272 0 238 65 22 43 chr10 92292063 92292109 -48024656 + (ATG)n Simple_repeat Simple_repeat 3 47 0 232 284 38 6 chr10 92293310 92293493 -48023272 + L1ME4a LINE L1 5931 6119 -2 391 290 97 17 chr10 92293578 92293754 -48023011 - MIR3 SINE MIR -17 191 2 250 243 18 5 chr10 92294105 92294173 -48022592 - MIR SINE MIR -71 137 90 767 276 63 29 chr10 92294214 92294453 -48022312 + MIR SINE MIR 10 256 -6 180 111 0 0 chr10 92295050 92295077 -48021688 + (A)n Simple_repeat Simple_repeat 1 27 0 2008 146 39 16 chr10 92297172 92297535 -48019230 + THE1C LTR MaLR 1 371 -4 222 171 0 0 chr10 92298567 92298608 -48018157 + A-rich Low_complexity Low_complexity 1 41 0 477 276 32 19 chr10 92299438 92299594 -48017171 + MIR SINE MIR 105 262 0 1877 184 96 38 chr10 92299699 92300176 -48016589 - MLT1D LTR MaLR 0 505 1 1026 211 135 28 chr10 92300309 92300636 -48016129 - MLT1A1 LTR MaLR -3 362 1 322 239 14 0 chr10 92301140 92301211 -48015554 + L2 LINE L2 2905 2976 -337 2134 101 0 0 chr10 92301324 92301600 -48015165 - AluSg SINE Alu -18 292 17 784 216 61 28 chr10 92301889 92302102 -48014663 - MIR SINE MIR -34 228 9 239 228 105 0 chr10 92302417 92302474 -48014291 + MER81 DNA DNA 47 109 -5 1028 134 82 5 chr10 92302591 92302785 -48013980 + MER3 DNA MER1_type 1 209 0 274 267 267 30 chr10 92302795 92302930 -48013835 - MER5B DNA MER1_type -7 171 5 197 293 32 98 chr10 92302942 92303065 -48013700 + MER5A DNA MER1_type 1 115 -74 2615 180 65 5 chr10 92303081 92303637 -48013128 - L1MC3 LINE L1 0 7785 7197 301 267 11 11 chr10 92303645 92303735 -48013030 - MLT1F1 LTR MaLR -442 125 36 538 340 89 41 chr10 92304556 92304950 -48011815 + L3 LINE CR1 1146 1558 -19 373 329 22 7 chr10 92305180 92305317 -48011448 + MIR3 SINE MIR 58 196 -12 493 290 138 21 chr10 92305574 92305864 -48010901 - MER102a DNA MER1_type -6 324 1 1838 107 32 121 chr10 92306271 92306463 -48010302 - THE1C LTR MaLR 0 375 238 585 0 0 0 chr10 92306463 92306528 -48010237 + (TA)n Simple_repeat Simple_repeat 2 66 0 1838 107 32 121 chr10 92306528 92306747 -48010018 - THE1C LTR MaLR -137 238 1 522 296 5 5 chr10 92307154 92307353 -48009412 - MARNA DNA Mariner -195 391 193 276 215 11 32 chr10 92307549 92307642 -48009123 + T-rich Low_complexity Low_complexity 5 95 0 233 140 18 0 chr10 92307644 92307701 -48009064 + (TTTAG)n Simple_repeat Simple_repeat 3 60 0 2300 201 29 47 chr10 92307720 92308278 -48008487 - MER34B LTR ERV1 -5 560 13 342 62 0 0 chr10 92309577 92309625 -48007140 - MADE1 DNA Mariner 0 80 33 192 265 176 0 chr10 92309630 92309698 -48007067 - MER5A DNA MER1_type -55 134 55 353 277 56 56 chr10 92309850 92310045 -48006720 + MIR3 SINE MIR 5 199 -9 252 242 152 68 chr10 92310148 92310280 -48006485 + MIR SINE MIR 21 163 -99 514 299 75 11 chr10 92310848 92311022 -48005743 + MIR SINE MIR 16 200 -62 431 313 124 28 chr10 92313196 92313445 -48003320 + L2 LINE L2 3038 3310 -3 249 33 0 0 chr10 92313480 92313510 -48003255 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1879 40 0 0 chr10 92314200 92314425 -48002340 + L1PA5 LINE L1 5923 6147 -7 216 0 0 0 chr10 92314425 92314449 -48002316 + (TG)n Simple_repeat Simple_repeat 2 25 0 2284 105 0 0 chr10 92315462 92315756 -48001009 - AluSc SINE Alu -15 294 1 302 300 28 8 chr10 92315970 92316223 -48000542 - L1MEc LINE L1 -4122 2274 2017 2176 116 0 0 chr10 92317357 92317649 -47999116 - AluSx SINE Alu -20 292 1 767 183 0 15 chr10 92318067 92318198 -47998567 - FLAM_C SINE Alu -3 130 2 260 232 134 0 chr10 92318460 92318542 -47998223 + MIR SINE MIR 62 154 -108 496 241 15 38 chr10 92319154 92319287 -47997478 + L2 LINE L2 3183 3312 -1 1745 58 31 0 chr10 92319649 92319872 -47996893 + MER30 DNA MER1_type 1 230 0 3248 18 0 0 chr10 92320638 92321035 -47995730 - L1PA2 LINE L1 -920 5226 4830 7022 12 0 0 chr10 92321035 92321891 -47994874 + L1PA2 LINE L1 5231 6086 -69 726 192 10 26 chr10 92321996 92322213 -47994552 + L1PA2 LINE L1 5953 6166 0 212 0 36 0 chr10 92322679 92322707 -47994058 + (TTA)n Simple_repeat Simple_repeat 1 29 0 330 295 40 20 chr10 92322707 92322856 -47993909 - MIR SINE MIR -1 261 110 21 36 0 0 chr10 92323859 92323887 -47992878 + AT_rich Low_complexity Low_complexity 1 28 0 439 346 15 0 chr10 92324297 92324430 -47992335 + L2 LINE L2 3137 3271 -1 533 232 140 34 chr10 92324940 92325147 -47991618 + MIR SINE MIR 34 262 0 278 297 314 6 chr10 92325667 92325842 -47990923 + MIR SINE MIR 20 248 -14 574 308 38 14 chr10 92325886 92326097 -47990668 + MIR SINE MIR 35 250 -12 313 250 91 11 chr10 92326760 92326848 -47989917 + MER5A DNA MER1_type 15 109 -80 457 248 114 34 chr10 92327253 92327402 -47989363 + MIR SINE MIR 46 206 -56 234 0 0 0 chr10 92327402 92327428 -47989337 + (A)n Simple_repeat Simple_repeat 1 26 0 207 0 0 0 chr10 92327428 92327451 -47989314 + (CA)n Simple_repeat Simple_repeat 2 24 0 366 287 81 35 chr10 92327969 92328143 -47988622 + L3 LINE CR1 1372 1553 -24 195 189 0 0 chr10 92328522 92328575 -47988190 + GA-rich Low_complexity Low_complexity 2 54 0 24 0 0 0 chr10 92328877 92328901 -47987864 + AT_rich Low_complexity Low_complexity 1 24 0 344 286 0 27 chr10 92328964 92329076 -47987689 - MIR SINE MIR -123 139 31 516 192 0 79 chr10 92329724 92329927 -47986838 - MER113 DNA MER1_type? -290 231 45 187 246 7 7 chr10 92330438 92330576 -47986189 + GA-rich Low_complexity Low_complexity 4 141 0 1848 202 30 20 chr10 92331546 92331952 -47984813 + MLT2D LTR ERVL 1 410 -4 220 220 0 0 chr10 92332206 92332256 -47984509 + T-rich Low_complexity Low_complexity 1 50 0 363 230 115 14 chr10 92332554 92332702 -47984063 - MER103 DNA DNA -2 164 2 503 328 70 21 chr10 92332787 92333028 -47983737 + MIR SINE MIR 4 256 -6 190 250 12 12 chr10 92333046 92333130 -47983635 + CT-rich Low_complexity Low_complexity 3 86 0 413 188 0 7 chr10 92333143 92333239 -47983526 - L1MD3 LINE L1 -2 7993 6244 210 300 46 122 chr10 92333252 92333515 -47983250 - L2 LINE L2 -52 3220 2978 24 0 0 0 chr10 92335152 92335176 -47981589 + GC_rich Low_complexity Low_complexity 1 24 0 631 284 36 18 chr10 92335713 92335938 -47980827 - MIR SINE MIR -14 248 20 237 257 40 10 chr10 92336326 92336427 -47980338 + (TA)n Simple_repeat Simple_repeat 2 105 0 22 0 0 0 chr10 92336445 92336467 -47980298 + AT_rich Low_complexity Low_complexity 1 22 0 43 20 0 0 chr10 92338592 92338642 -47978123 + AT_rich Low_complexity Low_complexity 1 50 0 1856 139 13 26 chr10 92339330 92339639 -47977126 + AluSx SINE Alu 1 305 -7 2045 95 16 118 chr10 92340128 92340569 -47976196 + L1MA8 LINE L1 5891 6286 -5 234 252 54 81 chr10 92340993 92341104 -47975661 - MER5B DNA MER1_type -69 109 2 649 159 6 74 chr10 92341912 92342075 -47974690 - MLT1B LTR MaLR -75 315 164 180 135 0 0 chr10 92342127 92342164 -47974601 + (A)n Simple_repeat Simple_repeat 1 37 0 826 155 0 72 chr10 92342241 92342435 -47974330 - MLT1B LTR MaLR -210 180 1 334 279 54 0 chr10 92342452 92342563 -47974202 + MIR3 SINE MIR 78 194 -14 2327 71 3 3 chr10 92342663 92342987 -47973778 + AluSc SINE Alu 1 324 0 1870 122 7 25 chr10 92344554 92344885 -47971880 + AluSx SINE Alu 1 326 0 208 313 31 21 chr10 92346014 92346110 -47970655 + MIR SINE MIR 20 116 -92 575 291 57 24 chr10 92346380 92346590 -47970175 - MIR SINE MIR -11 251 35 1356 36 0 0 chr10 92348154 92348319 -47968446 - L1PA3 LINE L1 0 6155 5991 243 0 0 0 chr10 92348957 92348965 -47967800 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 243 0 0 0 chr10 92348965 92348992 -47967773 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 26 50 0 0 chr10 92349123 92349163 -47967602 + AT_rich Low_complexity Low_complexity 1 40 0 189 244 35 0 chr10 92349282 92349368 -47967397 + (TA)n Simple_repeat Simple_repeat 1 89 0 1949 138 0 3 chr10 92349418 92349728 -47967037 - AluSx SINE Alu 0 309 1 350 372 62 4 chr10 92350391 92350617 -47966148 + L2 LINE L2 3075 3313 0 497 295 8 8 chr10 92352198 92352320 -47964445 + MER5B DNA MER1_type 1 122 -56 516 219 0 0 chr10 92352321 92352417 -47964348 - MER5A DNA MER1_type -85 104 9 250 297 31 0 chr10 92352856 92352920 -47963845 + MIR SINE MIR 25 90 -118 238 284 103 17 chr10 92353696 92353812 -47962953 - MIR SINE MIR -65 143 18 1777 167 22 22 chr10 92355955 92356267 -47960498 - AluJo SINE Alu 0 312 1 25 0 0 0 chr10 92356820 92356845 -47959920 + AT_rich Low_complexity Low_complexity 1 25 0 326 356 36 52 chr10 92357595 92357789 -47958976 - MIR3 SINE MIR -11 197 7 299 179 0 0 chr10 92359953 92360020 -47956745 - Charlie5 DNA MER1_type -82 2530 2464 404 261 31 0 chr10 92360038 92360168 -47956597 - L1MEc LINE L1 -6121 275 142 291 280 59 57 chr10 92360739 92361189 -47955576 - L1MEd LINE L1 -875 1615 1073 180 245 0 0 chr10 92361383 92361436 -47955329 + T-rich Low_complexity Low_complexity 1 53 0 4657 134 30 52 chr10 92361543 92362930 -47953835 - pTR5 LTR ERV1 0 2606 1523 418 188 0 12 chr10 92363743 92363828 -47952937 + MER61E LTR ERV1 2 85 -484 1312 201 103 20 chr10 92363890 92364393 -47952372 + MER61E LTR ERV1 249 794 0 2466 118 20 46 chr10 92364826 92365027 -47951738 + MSTA LTR MaLR 1 206 -222 2169 117 0 7 chr10 92365027 92365327 -47951438 + AluSx SINE Alu 1 298 -14 2466 118 20 46 chr10 92365327 92365516 -47951249 + MSTA LTR MaLR 206 381 -47 2161 126 0 3 chr10 92365516 92365818 -47950947 + AluSg SINE Alu 1 301 -9 2466 118 20 46 chr10 92365818 92365865 -47950900 + MSTA LTR MaLR 381 428 0 225 265 0 15 chr10 92366647 92366710 -47950055 - MLT1L LTR MaLR -44 571 510 447 298 28 22 chr10 92366710 92366891 -47949874 - MER63A DNA MER1_type -2 208 27 798 296 48 38 chr10 92367601 92368000 -47948765 - LTR16C LTR ERVL 0 491 89 227 222 0 0 chr10 92368607 92368652 -47948113 + L2 LINE L2 3265 3309 -4 801 292 29 12 chr10 92369176 92369416 -47947349 + MIR SINE MIR 3 246 -16 278 333 58 22 chr10 92370067 92370205 -47946560 + L2 LINE L2 2924 3066 -206 277 203 178 25 chr10 92370217 92370335 -47946430 + MIR SINE MIR 127 262 0 331 308 209 30 chr10 92370577 92370660 -47946105 - L1ME4a LINE L1 0 6121 6054 2228 106 7 0 chr10 92370660 92370952 -47945813 + AluSx SINE Alu 1 294 -18 331 308 209 30 chr10 92370952 92371131 -47945634 - L1ME4a LINE L1 -67 6054 5812 2750 102 0 0 chr10 92371149 92371513 -47945252 + THE1B LTR MaLR 1 364 0 193 80 0 0 chr10 92372082 92372107 -47944658 - L2 LINE L2 -20 3293 3269 529 262 0 0 chr10 92372124 92372265 -47944500 + L1M4 LINE L1 3914 4054 -2092 271 271 14 14 chr10 92372299 92372369 -47944396 - MIR SINE MIR -111 151 82 347 175 16 0 chr10 92372649 92372712 -47944053 - L2 LINE L2 -1 3312 3249 30 0 0 0 chr10 92373438 92373468 -47943297 + AT_rich Low_complexity Low_complexity 1 30 0 410 296 70 28 chr10 92373935 92374077 -47942688 + MIR SINE MIR 1 148 -114 317 315 55 44 chr10 92374158 92374339 -47942426 - MER5A DNA MER1_type 0 189 7 657 290 146 50 chr10 92375204 92375683 -47941082 - L2 LINE L2 -6 3307 2777 1514 186 24 3 chr10 92376151 92376442 -47940323 - L1MB5 LINE L1 -2 6172 5876 742 82 0 0 chr10 92377018 92377116 -47939649 - AluSp/q SINE Alu -13 300 203 319 236 6 50 chr10 92377177 92377338 -47939427 + (TA)n Simple_repeat Simple_repeat 2 155 0 242 263 0 0 chr10 92377510 92377586 -47939179 + L1MC4 LINE L1 6628 6703 -1339 259 213 66 16 chr10 92377693 92377754 -47939011 - MIR SINE MIR -61 147 84 231 36 0 0 chr10 92378038 92378066 -47938699 + (TG)n Simple_repeat Simple_repeat 2 29 0 566 156 149 7 chr10 92378650 92378791 -47937974 - MER34 LTR ERV1 -2 540 380 878 174 0 0 chr10 92378791 92378935 -47937830 + FRAM SINE Alu 21 164 -12 771 204 73 61 chr10 92378935 92379273 -47937492 - MER39 LTR ERV1 -148 559 5 215 328 112 35 chr10 92379810 92379926 -47936839 - MER5A DNA MER1_type -16 173 49 324 224 112 0 chr10 92380147 92380245 -47936520 - MIR SINE MIR -53 209 101 13270 184 27 34 chr10 92380390 92385200 -47931565 - L1MA3 LINE L1 -10 7714 2952 11185 159 30 68 chr10 92385200 92385724 -47931041 - L1MA3 LINE L1 -5267 2298 1756 477 0 0 0 chr10 92385724 92385777 -47930988 + (TC)n Simple_repeat Simple_repeat 2 54 0 11185 159 30 68 chr10 92385777 92387621 -47929144 - L1MA3 LINE L1 -5809 1756 18 5645 183 39 30 chr10 92387652 92388316 -47928449 - L1PA16 LINE L1 0 6166 5509 2392 82 0 10 chr10 92388316 92388619 -47928146 - AluSg SINE Alu -10 300 1 5645 183 39 30 chr10 92388619 92390642 -47926123 - L1PA16 LINE L1 -657 5509 3425 441 341 129 4 chr10 92390914 92391110 -47925655 + MIR SINE MIR 5 224 -38 244 355 124 14 chr10 92391932 92392214 -47924551 + L2 LINE L2 2432 2744 -570 1413 179 16 16 chr10 92392379 92392630 -47924135 + MLT1A1 LTR MaLR 115 365 0 1684 93 9 4 chr10 92392804 92393030 -47923735 + AluSg/x SINE Alu 83 309 -3 33 66 0 0 chr10 92393342 92393403 -47923362 + AT_rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr10 92394258 92394280 -47922485 + AT_rich Low_complexity Low_complexity 1 22 0 2394 84 3 3 chr10 92394506 92394816 -47921949 - AluSq SINE Alu -3 310 1 3192 155 83 11 chr10 92395129 92395755 -47921010 + L1MC3 LINE L1 6894 7564 -221 202 191 21 64 chr10 92395916 92396010 -47920755 + (TATAA)n Simple_repeat Simple_repeat 4 93 0 280 315 28 9 chr10 92397103 92397211 -47919554 + MIR SINE MIR 82 191 -71 2484 74 3 0 chr10 92398121 92398432 -47918333 - AluSp SINE Alu -1 312 1 258 313 112 37 chr10 92398966 92399100 -47917665 + L2 LINE L2 2920 3063 -209 1635 276 53 5 chr10 92399101 92399536 -47917229 + LTR40b LTR ERVL 7 462 0 2105 104 7 0 chr10 92399704 92399991 -47916774 + AluSq SINE Alu 1 289 -24 21 0 0 0 chr10 92400211 92400232 -47916533 + AT_rich Low_complexity Low_complexity 1 21 0 481 329 167 0 chr10 92401468 92401684 -47915081 + MIR SINE MIR 1 252 -10 246 279 143 26 chr10 92402214 92402368 -47914397 - L1ME4a LINE L1 -12 6109 5938 569 312 83 28 chr10 92402433 92402795 -47913970 + MLT1J LTR MaLR 1 382 -129 37 39 0 0 chr10 92403012 92403063 -47913702 + AT_rich Low_complexity Low_complexity 1 51 0 401 243 71 80 chr10 92403348 92403587 -47913178 - L1ME4a LINE L1 -410 5711 5475 2460 136 31 12 chr10 92404315 92404735 -47912030 + MSTA LTR MaLR 1 428 0 256 272 43 11 chr10 92404939 92405031 -47911734 - U13 snRNA snRNA -9 95 1 183 129 0 0 chr10 92405201 92405232 -47911533 + (TG)n Simple_repeat Simple_repeat 2 32 0 1824 274 93 25 chr10 92405235 92406543 -47910222 + L1ME3A LINE L1 4620 6023 -147 21 0 0 0 chr10 92407079 92407100 -47909665 + AT_rich Low_complexity Low_complexity 1 21 0 1426 219 14 0 chr10 92407566 92407844 -47908921 + AluJb SINE Alu 1 282 -30 3026 296 80 21 chr10 92408152 92409412 -47907353 + L2 LINE L2 1227 2561 -753 569 208 19 0 chr10 92409962 92410068 -47906697 + MIR SINE MIR 65 172 -90 366 255 28 9 chr10 92410502 92410608 -47906157 - MIR SINE MIR -7 255 148 4279 163 56 7 chr10 92410661 92411140 -47905625 + L1MB1 LINE L1 5281 5820 -348 384 103 0 0 chr10 92411140 92411198 -47905567 + (CA)n Simple_repeat Simple_repeat 1 58 0 4279 163 56 7 chr10 92411198 92411564 -47905201 + L1MB1 LINE L1 5820 6167 -1 329 349 13 40 chr10 92411591 92411743 -47905022 - MIR3 SINE MIR -43 165 18 506 189 28 0 chr10 92412185 92412291 -47904474 - AluSg/x SINE Alu -3 299 191 622 128 0 0 chr10 92412291 92412377 -47904388 - AluS SINE Alu -225 88 3 535 323 40 15 chr10 92412630 92412831 -47903934 + MIR SINE MIR 21 226 -36 274 311 55 12 chr10 92413863 92414027 -47902738 - L1MC4a LINE L1 -1884 5924 5754 777 167 0 0 chr10 92414978 92415116 -47901649 + L1 LINE L1 3826 3963 -2183 5157 142 16 7 chr10 92415237 92416936 -47899829 + L1PA16 LINE L1 4456 6164 -2 252 368 53 41 chr10 92417353 92417619 -47899146 - L2 LINE L2 -9 3263 2995 375 239 91 129 chr10 92417631 92417839 -47898926 - L1ME4a LINE L1 -3 6101 5887 2289 102 0 10 chr10 92417839 92418152 -47898613 + AluSg SINE Alu 1 310 0 375 239 91 129 chr10 92418152 92418546 -47898219 - L1ME4a LINE L1 -217 5887 5522 259 387 116 6 chr10 92418637 92418965 -47897800 - L2 LINE L2 -397 2917 2554 491 314 53 11 chr10 92419152 92419340 -47897425 + MIR SINE MIR 15 210 -52 305 277 135 28 chr10 92419506 92419647 -47897118 - MIR SINE MIR -48 214 59 316 273 0 116 chr10 92420247 92420445 -47896320 - L1ME4a LINE L1 -2277 3852 3678 348 137 0 0 chr10 92420445 92420496 -47896269 - AluJ/FRAM SINE Alu -29 273 223 637 226 96 105 chr10 92420515 92420679 -47896086 - MER110A LTR ERV1 0 468 304 1237 34 0 0 chr10 92420679 92420826 -47895939 + L1PA5 LINE L1 6001 6147 -7 637 226 96 105 chr10 92420826 92421119 -47895646 - MER110A LTR ERV1 -164 304 44 261 338 0 7 chr10 92421215 92421357 -47895408 - L1ME4a LINE L1 -2507 3622 3482 25 31 0 0 chr10 92421399 92421431 -47895334 + AT_rich Low_complexity Low_complexity 1 32 0 612 99 0 0 chr10 92421431 92421512 -47895253 - AluSg/x SINE Alu -27 283 203 4746 170 88 38 chr10 92421512 92421820 -47894945 - L1MC1 LINE L1 -7 6326 6035 2240 120 0 0 chr10 92421820 92422128 -47894637 - AluSx SINE Alu -4 308 1 4746 170 88 38 chr10 92422128 92422789 -47893976 - L1MC1 LINE L1 -298 6035 5279 2125 117 0 10 chr10 92422789 92423097 -47893668 - AluSq SINE Alu -8 305 1 4746 170 88 38 chr10 92423097 92423487 -47893278 - L1MC1 LINE L1 -1054 5279 4910 449 285 8 0 chr10 92423490 92423620 -47893145 - L1ME4a LINE L1 -5987 132 2 898 229 98 58 chr10 92424007 92424417 -47892348 - LTR37A LTR ERV1 0 426 1 335 335 19 32 chr10 92424545 92424700 -47892065 - MER5B DNA MER1_type -11 167 15 218 388 106 16 chr10 92424837 92425025 -47891740 + MIR SINE MIR 2 206 -56 186 382 9 9 chr10 92425051 92425161 -47891604 + MIR SINE MIR 147 256 -6 2337 93 0 0 chr10 92425571 92425862 -47890903 - AluSc SINE Alu -18 291 1 25 0 0 0 chr10 92425873 92425898 -47890867 + AT_rich Low_complexity Low_complexity 1 25 0 302 277 0 0 chr10 92428163 92428246 -47888519 + L2 LINE L2 2900 2982 -290 1470 111 28 24 chr10 92428246 92428499 -47888266 - L1PA11 LINE L1 -2 6172 5919 614 286 11 11 chr10 92428604 92428782 -47887983 - MIR SINE MIR -65 197 20 3193 167 18 66 chr10 92428788 92429174 -47887591 - L1MA7 LINE L1 -22 6269 5866 1914 108 8 0 chr10 92429174 92429432 -47887333 - AluSg SINE Alu -2 308 49 3193 167 18 66 chr10 92429432 92430712 -47886053 - L1MA7 LINE L1 -425 5866 4627 512 164 39 0 chr10 92430813 92430917 -47885848 + L1MA7 LINE L1 6146 6253 -38 330 26 0 0 chr10 92431068 92431107 -47885658 + (TG)n Simple_repeat Simple_repeat 2 40 0 418 236 114 16 chr10 92432406 92432529 -47884236 + MIR SINE MIR 77 211 -51 1406 146 20 4 chr10 92432535 92432625 -47884140 + L1MA6 LINE L1 6050 6137 -163 1948 116 43 0 chr10 92432625 92432902 -47883863 - AluSg SINE Alu -14 296 8 1406 146 20 4 chr10 92432902 92433058 -47883707 + L1MA6 LINE L1 6137 6300 0 631 282 53 6 chr10 92433612 92433782 -47882983 - MER5B DNA MER1_type 0 178 1 1916 117 7 26 chr10 92434119 92434426 -47882339 - L1PA15 LINE L1 -21 6144 5844 690 410 19 73 chr10 92434441 92434756 -47882009 - AluYa8 SINE Alu -2 298 1 271 200 100 0 chr10 92434823 92434893 -47881872 - L1ME LINE L1 -302 5819 5743 220 213 16 0 chr10 92435142 92435203 -47881562 + (TTAAG)n Simple_repeat Simple_repeat 3 64 0 458 335 80 13 chr10 92435444 92435683 -47881082 + MIR SINE MIR 5 259 -3 317 200 31 0 chr10 92436152 92436217 -47880548 + L2 LINE L2 3247 3313 0 307 276 71 0 chr10 92436250 92436348 -47880417 - MIR SINE MIR -68 194 90 298 317 35 121 chr10 92437323 92437613 -47879152 + L2 LINE L2 3008 3272 0 470 262 5 63 chr10 92437711 92437902 -47878863 + GA-rich Low_complexity Low_complexity 1 180 0 468 316 24 67 chr10 92438232 92438500 -47878265 + MIR SINE MIR 4 256 -6 405 315 101 39 chr10 92438619 92438876 -47877889 + L3 LINE CR1 589 861 -716 2060 134 3 3 chr10 92439814 92440120 -47876645 + AluSx SINE Alu 1 306 -6 289 284 167 0 chr10 92440760 92440862 -47875903 - L2 LINE L2 -5 3267 3149 2163 132 0 0 chr10 92441951 92442262 -47874503 + AluSx SINE Alu 1 311 -1 263 247 12 12 chr10 92442324 92442405 -47874360 - MER103 DNA DNA -9 157 77 430 370 69 5 chr10 92442407 92442610 -47874155 + L2 LINE L2 2858 3073 -240 230 319 0 0 chr10 92442819 92442888 -47873877 - MIR3 SINE MIR -48 160 92 278 311 222 19 chr10 92442955 92443167 -47873598 - MIR SINE MIR -6 256 2 413 234 64 0 chr10 92443581 92443675 -47873090 - L2 LINE L2 -2 3270 3171 189 0 0 0 chr10 92443796 92443817 -47872948 + (A)n Simple_repeat Simple_repeat 1 21 0 716 208 0 21 chr10 92444068 92444212 -47872553 - MLT2D LTR ERVL 0 414 274 548 292 39 11 chr10 92444243 92444527 -47872238 - L1MEc LINE L1 -4734 1576 1285 434 302 68 77 chr10 92444552 92445321 -47871444 - L1MEc LINE L1 -4912 1207 446 446 186 0 108 chr10 92445471 92445600 -47871165 - MLT1H LTR MaLR -14 535 421 308 243 0 14 chr10 92445946 92446016 -47870749 - MIR SINE MIR -138 124 56 306 0 0 0 chr10 92446146 92446180 -47870585 + (TG)n Simple_repeat Simple_repeat 2 35 0 243 227 0 0 chr10 92446845 92446889 -47869876 + polypurine Low_complexity Low_complexity 2 45 0 24 0 0 0 chr10 92447222 92447246 -47869519 + AT_rich Low_complexity Low_complexity 1 24 0 276 220 18 55 chr10 92447247 92447356 -47869409 + HAL1b LINE L1 226 330 -1018 775 259 68 93 chr10 92447647 92448637 -47868128 + L1M4 LINE L1 4032 4996 -1150 * 2012 222 54 121 chr10 92448628 92449363 -47867402 + L1ME1 LINE L1 4596 5188 -978 2121 111 7 3 chr10 92449363 92449660 -47867105 + AluSx SINE Alu 1 298 -14 2012 222 54 121 chr10 92449660 92450572 -47866193 + L1ME1 LINE L1 5188 6159 -7 234 239 119 0 chr10 92450569 92450636 -47866129 + L1M4 LINE L1 4795 4869 -1277 * 4845 93 1 1 chr10 92451297 92451965 -47864800 + L1PA10 LINE L1 5312 5979 -189 207 0 0 0 chr10 92452483 92452506 -47864259 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1188 175 4 29 chr10 92452637 92452883 -47863882 - L1PA16 LINE L1 0 6166 5927 821 291 75 28 chr10 92452920 92453278 -47863487 + MER76 LTR ERV 284 658 -30 306 299 121 19 chr10 92454361 92454568 -47862197 + MIR SINE MIR 20 247 -15 1532 171 7 52 chr10 92454612 92454899 -47861866 + AluJo SINE Alu 1 274 -38 714 294 52 0 chr10 92457942 92458136 -47858629 + MIR SINE MIR 43 246 -16 1217 227 46 5 chr10 92458342 92458728 -47858037 + MER63C DNA MER1_type 1 494 -436 26 50 0 0 chr10 92459074 92459114 -47857651 + AT_rich Low_complexity Low_complexity 1 40 0 1731 158 46 15 chr10 92459250 92459579 -47857186 - MER44D DNA MER2_type 0 609 1 1048 264 39 14 chr10 92459618 92459974 -47856791 - L1MC4 LINE L1 -473 7569 7205 423 311 18 37 chr10 92460736 92460900 -47855865 - MIR3 SINE MIR -35 173 13 816 204 0 19 chr10 92460923 92461080 -47855685 - FRAM SINE Alu -12 154 1 859 265 71 68 chr10 92461668 92462215 -47854550 + HAL1b LINE L1 342 890 -458 345 313 40 13 chr10 92462524 92462824 -47853941 + L1M4 LINE L1 2143 2450 -3696 674 235 46 97 chr10 92463109 92463522 -47853243 + L1M4 LINE L1 3029 3420 -2726 185 231 13 90 chr10 92463583 92463661 -47853104 + L2 LINE L2 3242 3313 0 7189 277 104 17 chr10 92463947 92466819 -47849946 + L2 LINE L2 213 3313 0 220 311 17 84 chr10 92466846 92466965 -47849800 - L2 LINE L2 -52 3220 3110 247 309 12 36 chr10 92467168 92467252 -47849513 - L2 LINE L2 -50 3222 3141 2333 99 3 6 chr10 92467375 92467687 -47849078 + AluSp SINE Alu 3 313 0 3380 188 35 3 chr10 92468249 92468882 -47847883 - MER82 DNA MER2_type 0 653 1 234 0 0 0 chr10 92469661 92469687 -47847078 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 2565 150 102 2 chr10 92469697 92470170 -47846595 - LTR64 LTR ERVK -38 520 1 243 306 36 90 chr10 92470171 92470393 -47846372 + MIR SINE MIR 53 262 0 236 254 76 17 chr10 92470428 92470546 -47846219 - L1ME4a LINE L1 -13 6108 5984 2433 152 42 16 chr10 92472239 92472738 -47844027 - L1MA8 LINE L1 0 6291 5780 3473 217 30 50 chr10 92472966 92473282 -47843483 - L1M4 LINE L1 -5639 903 582 1670 197 37 8 chr10 92473282 92473633 -47843132 + MLT1A1 LTR MaLR 4 364 -1 3473 217 30 50 chr10 92473633 92474223 -47842542 - L1M4 LINE L1 -5960 582 15 1653 177 96 6 chr10 92474398 92474742 -47842023 - MLT1B LTR MaLR 0 390 16 683 253 62 8 chr10 92474766 92475023 -47841742 - L1ME4a LINE L1 -339 5823 5553 303 263 77 19 chr10 92475025 92475288 -47841477 - L1ME4a LINE L1 -710 5452 5171 247 235 10 41 chr10 92475435 92475533 -47841232 + L1MC4 LINE L1 6614 6708 -1334 * 1482 290 106 14 chr10 92475523 92476664 -47840101 - L1ME4a LINE L1 -1094 5052 3807 1944 109 42 17 chr10 92476672 92477141 -47839624 - MLT2A2 LTR ERVL -2 451 3 902 260 128 26 chr10 92477212 92477947 -47838818 - L1ME4a LINE L1 -2659 3487 2678 281 252 87 0 chr10 92478136 92478251 -47838514 + L1MEd LINE L1 714 838 -5281 407 294 48 0 chr10 92478370 92478516 -47838249 - HAL1 LINE L1 -821 1686 1534 282 298 34 75 chr10 92478524 92478637 -47838128 + L1MEd LINE L1 974 1090 -5029 2426 88 0 0 chr10 92478637 92478944 -47837821 + AluSx SINE Alu 1 307 -5 282 298 34 75 chr10 92478944 92479095 -47837670 + L1MEd LINE L1 1090 1227 -4892 1008 163 98 15 chr10 92479137 92479340 -47837425 - Tigger2 DNA MER2_type 0 2718 2499 6006 48 9 0 chr10 92479341 92480256 -47836509 + L1P2 LINE L1 4605 5527 -627 285 340 76 14 chr10 92480903 92481047 -47835718 + MIR SINE MIR 104 256 -6 2127 269 62 16 chr10 92481622 92482310 -47834455 - L1ME3A LINE L1 -9 6161 5442 2073 139 24 24 chr10 92483582 92483964 -47832801 - L1MB2 LINE L1 -4 6167 5786 6567 87 3 0 chr10 92483993 92484887 -47831878 - L1PB1 LINE L1 -1 6150 5254 549 248 21 21 chr10 92484897 92485038 -47831727 - MLT1E LTR MaLR -451 142 2 667 277 98 8 chr10 92485057 92485292 -47831473 - MIR SINE MIR 0 262 7 1701 156 10 36 chr10 92487791 92488098 -47828667 + AluJb SINE Alu 5 303 -9 258 259 26 43 chr10 92488267 92488383 -47828382 + CT-rich Low_complexity Low_complexity 5 118 0 244 338 0 0 chr10 92488682 92488753 -47828012 + L2 LINE L2 3198 3268 -4 287 317 39 19 chr10 92488985 92489089 -47827676 - L2 LINE L2 -20 3293 3188 1311 297 55 27 chr10 92491872 92492976 -47823789 - L1M4 LINE L1 -2695 3451 2317 294 182 0 0 chr10 92493063 92493129 -47823636 + (CA)n Simple_repeat Simple_repeat 2 67 0 739 297 67 22 chr10 92493636 92494100 -47822665 - L1ME4a LINE L1 -6 6115 5631 290 348 43 0 chr10 92494877 92495015 -47821750 - MIR SINE MIR -12 250 107 236 158 0 35 chr10 92495060 92495076 -47821689 + A-rich Low_complexity Low_complexity 1 16 -39 2253 113 0 3 chr10 92495076 92495386 -47821379 + AluSc SINE Alu 1 309 0 236 158 0 35 chr10 92495386 92495426 -47821339 + A-rich Low_complexity Low_complexity 16 55 0 400 265 33 66 chr10 92495727 92495999 -47820766 + L1MB8 LINE L1 5742 6004 -174 581 261 34 86 chr10 92496372 92496596 -47820169 + MIR SINE MIR 3 224 -38 188 352 23 0 chr10 92496685 92496773 -47819992 - L2 LINE L2 -1671 1643 1554 395 282 131 48 chr10 92497728 92498224 -47818541 + L1M4 LINE L1 2447 2983 -3163 1917 204 40 2 chr10 92499081 92499482 -47817283 + MLT2C2 LTR ERVL 1 416 -48 1595 252 135 26 chr10 92500822 92501369 -47815396 + MLT1E2 LTR MaLR 20 626 0 188 253 13 101 chr10 92502142 92502221 -47814544 - L2 LINE L2 0 3313 3242 829 282 172 19 chr10 92502229 92502647 -47814118 + MLT1G1 LTR MaLR 114 595 0 225 331 105 38 chr10 92502806 92502939 -47813826 - L2 LINE L2 -583 2731 2590 360 228 9 35 chr10 92503078 92503192 -47813573 - L1MC5 LINE L1 -44 7917 7807 185 256 39 39 chr10 92503231 92503309 -47813456 - L2 LINE L2 -8 3305 3228 1233 281 108 4 chr10 92503357 92503827 -47812938 - LTR33 LTR ERVL 0 521 3 1537 265 53 2 chr10 92503985 92504438 -47812327 - L1ME3A LINE L1 -1 6169 5694 2359 196 52 8 chr10 92505337 92505821 -47810944 - MLT1D LTR MaLR 0 505 1 2312 110 0 0 chr10 92506360 92506668 -47810097 - AluSx SINE Alu -2 310 3 339 367 45 11 chr10 92506831 92507008 -47809757 - MIR SINE MIR -76 186 4 197 283 61 81 chr10 92507291 92507365 -47809400 - L2 LINE L2 -182 3090 3016 2120 73 52 3 chr10 92507365 92507651 -47809114 + AluY SINE Alu 1 300 -11 197 283 61 81 chr10 92507651 92507823 -47808942 - L2 LINE L2 -256 3016 2849 319 297 144 9 chr10 92508057 92508168 -47808597 + L2 LINE L2 3142 3267 -5 1783 198 90 0 chr10 92508352 92508731 -47808034 - MER63 DNA MER1_type 0 1061 649 692 223 47 62 chr10 92508731 92508924 -47807841 - MER58A DNA MER1_type 0 224 35 231 279 0 15 chr10 92559644 92559712 -47757053 + GA-rich Low_complexity Low_complexity 5 71 0 250 335 45 6 chr10 92560216 92560392 -47756373 + L1ME4a LINE L1 5939 6121 0 22 0 0 0 chr10 92560510 92560532 -47756233 + AT_rich Low_complexity Low_complexity 1 22 0 1027 171 19 46 chr10 92560635 92560851 -47755914 - L1PA16 LINE L1 -6 6160 5951 229 182 0 23 chr10 92561839 92561883 -47754882 + MER58A DNA MER1_type 15 57 -167 21 0 0 0 chr10 92561888 92561909 -47754856 + AT_rich Low_complexity Low_complexity 1 21 0 524 184 0 0 chr10 92561910 92561986 -47754779 + AluJ/FLAM SINE Alu 2 77 -235 2180 142 33 38 chr10 92563292 92563658 -47753107 + THE1B LTR MaLR 1 364 0 285 296 11 0 chr10 92563789 92563877 -47752888 + L1ME LINE L1 5571 5659 -462 386 200 18 27 chr10 92563974 92564084 -47752681 + L1ME4a LINE L1 6011 6119 -2 1389 259 127 11 chr10 92564617 92565075 -47751690 - L1ME3A LINE L1 -5 6165 5652 589 288 25 10 chr10 92565234 92565432 -47751333 - MIR SINE MIR -3 259 59 25 75 0 0 chr10 92566466 92566519 -47750246 + AT_rich Low_complexity Low_complexity 1 53 0 5267 132 61 23 chr10 92566600 92567273 -47749492 + L1MC1 LINE L1 5434 6149 -184 2214 113 0 7 chr10 92567273 92567573 -47749192 + AluSx SINE Alu 1 298 -14 5267 132 61 23 chr10 92567573 92567765 -47749000 + L1MC1 LINE L1 6149 6332 -1 450 222 32 56 chr10 92567963 92568089 -47748676 - L2 LINE L2 -2 3311 3189 180 0 0 0 chr10 92568111 92568131 -47748634 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1804 158 4 0 chr10 92568131 92568410 -47748355 - AluJb SINE Alu -32 280 1 217 313 50 0 chr10 92568528 92568627 -47748138 + MIR SINE MIR 148 251 -11 210 318 79 16 chr10 92569146 92569209 -47747556 - MER91C DNA MER1_type -38 102 36 1593 184 11 28 chr10 92569284 92569567 -47747198 - AluJo SINE Alu -18 294 17 318 98 0 20 chr10 92571372 92571423 -47745342 - MADE1 DNA Mariner 0 80 31 863 122 12 1 chr10 92571423 92571670 -47745095 + AluSx SINE Alu 1 279 -31 277 93 0 0 chr10 92571692 92571735 -47745030 - MADE1 DNA Mariner -37 43 1 203 270 68 74 chr10 92571735 92571898 -47744867 - L2 LINE L2 -55 3217 3056 464 286 62 25 chr10 92572667 92572828 -47743937 - MIR SINE MIR -89 173 7 16361 121 45 49 chr10 92573725 92574797 -47741968 + Tigger2 DNA MER2_type 1 1076 -1642 1574 203 3 20 chr10 92574797 92575098 -47741667 + AluJo SINE Alu 1 296 -16 16361 121 45 49 chr10 92575098 92576754 -47740011 + Tigger2 DNA MER2_type 1076 2718 0 256 296 0 74 chr10 92576841 92576949 -47739816 - MIR SINE MIR 0 262 163 490 273 67 31 chr10 92577092 92577286 -47739479 + MIR SINE MIR 43 243 -19 186 222 0 0 chr10 92577480 92577516 -47739249 + L2 LINE L2 3206 3241 -72 373 319 52 0 chr10 92577607 92577723 -47739042 - MIR SINE MIR -139 123 2 571 231 141 0 chr10 92578121 92578242 -47738523 + FRAM SINE Alu 1 138 -38 34 42 0 0 chr10 92578242 92578290 -47738475 + AT_rich Low_complexity Low_complexity 1 48 0 512 287 37 32 chr10 92578345 92578533 -47738232 - MIR SINE MIR -70 192 4 186 344 40 24 chr10 92578866 92578991 -47737774 - L2 LINE L2 -194 3078 2952 23 0 0 0 chr10 92579669 92579692 -47737073 + AT_rich Low_complexity Low_complexity 1 23 0 199 301 27 27 chr10 92579797 92579870 -47736895 + MIR3 SINE MIR 87 159 -49 180 355 7 50 chr10 92580852 92580993 -47735772 - L2 LINE L2 -838 2476 2342 22 35 0 0 chr10 92581417 92581446 -47735319 + AT_rich Low_complexity Low_complexity 1 29 0 785 106 0 0 chr10 92582363 92582467 -47734298 + AluSp/q SINE Alu 199 302 -11 183 80 0 0 chr10 92582616 92582641 -47734124 + (TA)n Simple_repeat Simple_repeat 1 25 0 966 256 131 25 chr10 92582654 92583069 -47733696 + L1MC4a LINE L1 5514 5964 -1844 25 0 0 0 chr10 92583216 92583241 -47733524 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr10 92584307 92584348 -47732417 + AT_rich Low_complexity Low_complexity 1 41 0 2160 106 6 34 chr10 92584954 92585275 -47731490 + AluSx SINE Alu 1 312 0 2126 100 7 0 chr10 92585693 92586030 -47730735 - AluSg SINE Alu 0 339 1 1876 92 32 0 chr10 92586035 92586285 -47730480 - AluSg SINE Alu -16 294 37 22 0 0 0 chr10 92586286 92586308 -47730457 + AT_rich Low_complexity Low_complexity 1 22 0 2145 52 10 38 chr10 92586308 92586647 -47730118 - AluY SINE Alu 0 331 1 261 333 46 0 chr10 92587164 92587251 -47729514 - MIR SINE MIR -76 132 42 1364 228 73 42 chr10 92587280 92587775 -47728990 + L1ME1 LINE L1 5650 6159 -7 2441 70 6 13 chr10 92587957 92588270 -47728495 - AluY SINE Alu 0 311 1 194 257 0 0 chr10 92588731 92588766 -47727999 + L2 LINE L2 3053 3087 -185 218 316 0 26 chr10 92588795 92588871 -47727894 + L2 LINE L2 3177 3250 -22 266 305 99 14 chr10 92588981 92589194 -47727571 - MIR SINE MIR -18 244 14 24 0 0 0 chr10 92590100 92590124 -47726641 + AT_rich Low_complexity Low_complexity 1 24 0 944 305 169 6 chr10 92590185 92590347 -47726418 - L2 LINE L2 -12 3301 3167 195 45 0 68 chr10 92590347 92590391 -47726374 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2081 118 7 0 chr10 92590393 92590690 -47726075 + AluSx SINE Alu 1 299 -13 944 305 169 6 chr10 92590690 92591085 -47725680 - L2 LINE L2 -146 3167 2624 2441 128 33 19 chr10 92591085 92591444 -47725321 - THE1B LTR MaLR 0 364 1 12413 97 2 3 chr10 92591444 92593026 -47723739 - THE1B-int LTR MaLR 0 1580 1 2258 131 28 31 chr10 92593029 92593387 -47723378 - THE1B LTR MaLR -7 357 1 922 260 117 14 chr10 92593387 92593668 -47723097 - L2 LINE L2 -686 2628 2319 439 233 124 67 chr10 92593672 92594098 -47722667 - LTR33A LTR ERVL 0 523 3 770 272 196 3 chr10 92594110 92594456 -47722309 - L2 LINE L2 -993 2321 1909 375 242 137 16 chr10 92594461 92594585 -47722180 + MIR SINE MIR 82 220 -42 1839 182 102 31 chr10 92594774 92595187 -47721578 - MER65A LTR ERV1 -3 442 1 1518 266 50 64 chr10 92595323 92595947 -47720818 + L1ME1 LINE L1 28 642 -5754 1198 218 71 20 chr10 92595984 92596337 -47720428 + L1ME1 LINE L1 4879 5249 -966 3672 165 56 27 chr10 92596350 92597065 -47719700 + L1MB8 LINE L1 5430 6165 -13 2953 180 99 12 chr10 92597104 92597742 -47719023 + L1ME1 LINE L1 5365 6057 -178 712 234 13 0 chr10 92597784 92597942 -47718823 + L1MA10 LINE L1 6175 6334 0 225 313 112 15 chr10 92597945 92598079 -47718686 - MIR SINE MIR -2 260 114 199 355 41 16 chr10 92598148 92598269 -47718496 - L2 LINE L2 -8 3264 3141 1631 113 0 0 chr10 92599160 92599381 -47717384 + AluSg/x SINE Alu 71 291 -19 291 165 13 51 chr10 92599383 92599462 -47717303 + Charlie8 DNA MER1_type 88 163 -2254 384 213 32 21 chr10 92600468 92600562 -47716203 + MER5A DNA MER1_type 11 105 -84 8028 165 71 105 chr10 92601497 92603314 -47713451 - MER52A LTR ERV1 0 1755 1 1145 161 98 5 chr10 92603723 92603928 -47712837 + Tigger4(Zombi) DNA MER2_type 1 224 -2507 3739 101 60 5 chr10 92603950 92604504 -47712261 + Tigger4(Zombi) DNA MER2_type 2148 2731 0 654 267 114 81 chr10 92605022 92605305 -47711460 - LTR33 LTR ERVL 0 521 214 2846 10 0 0 chr10 92605305 92605608 -47711157 + L1PA2 LINE L1 5853 6155 0 654 267 114 81 chr10 92605608 92605807 -47710958 - LTR33 LTR ERVL -307 214 23 564 300 114 18 chr10 92606026 92606253 -47710512 + MIR SINE MIR 8 256 -6 258 244 163 38 chr10 92606355 92606564 -47710201 - L1ME4a LINE L1 -120 6001 5767 2169 88 0 0 chr10 92606598 92606872 -47709893 + AluY SINE Alu 29 302 -9 2033 81 0 26 chr10 92606908 92607180 -47709585 + AluSc SINE Alu 1 265 -44 5150 254 63 13 chr10 92607881 92609645 -47707120 + ERVL LTR ERVL 2417 5334 -430 1684 175 0 38 chr10 92609645 92609959 -47706806 + AluJb SINE Alu 1 302 -10 6841 91 52 0 chr10 92609959 92610923 -47705842 - L1PA12 LINE L1 -9 6159 5183 1013 173 99 30 chr10 92611700 92611902 -47704863 + MER58A DNA MER1_type 1 216 -8 2426 229 84 13 chr10 92612925 92613532 -47703233 + MLT2F LTR ERVL 14 663 0 311 331 54 14 chr10 92613553 92613701 -47703064 + MIR3 SINE MIR 32 185 -23 811 228 35 18 chr10 92613952 92614123 -47702642 + MER96 DNA MER1_type 2 175 0 220 229 157 0 chr10 92614126 92614196 -47702569 + MIR SINE MIR 32 112 -150 567 226 44 130 chr10 92614557 92614827 -47701938 - MIR SINE MIR 0 262 16 205 289 79 13 chr10 92614828 92614904 -47701861 + L2 LINE L2 3184 3264 -8 412 352 28 0 chr10 92615136 92615318 -47701447 + MIR SINE MIR 72 258 -4 216 300 0 0 chr10 92615355 92615415 -47701350 + L2 LINE L2 3254 3313 0 213 291 0 0 chr10 92615673 92615728 -47701037 + L2 LINE L2 3259 3313 0 380 252 218 7 chr10 92616593 92616740 -47700025 - MIR SINE MIR -7 255 78 38 68 0 0 chr10 92616978 92617051 -47699714 + AT_rich Low_complexity Low_complexity 1 73 0 22 35 0 0 chr10 92617065 92617094 -47699671 + AT_rich Low_complexity Low_complexity 1 29 0 509 282 75 24 chr10 92618056 92618311 -47698454 + L1MC4a LINE L1 5613 5880 -1928 28 29 0 0 chr10 92618401 92618436 -47698329 + AT_rich Low_complexity Low_complexity 1 35 0 753 184 57 85 chr10 92619292 92619695 -47697070 + MER31B LTR ERV1 1 465 -1 425 271 71 19 chr10 92619696 92619851 -47696914 - MIR SINE MIR -93 169 7 202 356 34 17 chr10 92620207 92620325 -47696440 - MIR3 SINE MIR -41 167 48 236 321 67 22 chr10 92620345 92620479 -47696286 - MIR3 SINE MIR -9 199 60 2491 89 0 6 chr10 92620533 92620848 -47695917 + AluSp SINE Alu 1 313 0 359 243 339 17 chr10 92620854 92621031 -47695734 - MIR SINE MIR -11 251 18 226 259 0 0 chr10 92621080 92621138 -47695627 + MIR SINE MIR 86 143 -119 2593 161 13 0 chr10 92621219 92621617 -47695148 + MER57A LTR ERV1 1 403 0 24 0 0 0 chr10 92622700 92622724 -47694041 + AT_rich Low_complexity Low_complexity 1 24 0 2675 93 133 5 chr10 92622897 92623296 -47693469 + LTR7 LTR ERV1 1 450 0 9786 174 49 60 chr10 92623296 92626879 -47689886 + HERVH LTR ERV1 1 3601 -4112 6695 130 5 6 chr10 92626870 92628010 -47688755 + HERVH LTR ERV1 3809 4915 -2287 * 1478 187 4 0 chr10 92628007 92628274 -47688491 + HERVH LTR ERV1 5749 6016 -1697 * 3356 91 62 47 chr10 92628267 92628816 -47687949 + HERVH LTR ERV1 7157 7713 0 2151 97 23 5 chr10 92628816 92629204 -47687561 + LTR7 LTR ERV1 1 439 -11 346 259 42 35 chr10 92629247 92629390 -47687375 - L1ME4a LINE L1 -196 5925 5782 494 164 28 34 chr10 92629413 92629590 -47687175 + CT-rich Low_complexity Low_complexity 4 179 0 352 306 92 10 chr10 92629590 92629796 -47686969 - HAL1 LINE L1 0 2507 2285 512 254 105 84 chr10 92630190 92630477 -47686288 + MLT1J2 LTR MaLR 93 431 -19 726 198 6 66 chr10 92630861 92630980 -47685785 - MIR SINE MIR 0 262 154 1574 180 46 11 chr10 92630980 92631263 -47685502 - AluJo SINE Alu -17 295 3 726 198 6 66 chr10 92631263 92631310 -47685455 - MIR SINE MIR -108 154 106 1870 142 83 42 chr10 92631312 92631672 -47685093 + THE1C LTR MaLR 1 375 0 1277 175 65 86 chr10 92631811 92631996 -47684769 - MLT1B LTR MaLR 0 390 214 324 0 0 0 chr10 92631996 92632032 -47684733 + (GA)n Simple_repeat Simple_repeat 1 36 0 1277 175 65 86 chr10 92632032 92632184 -47684581 - MLT1B LTR MaLR -176 214 60 571 216 64 8 chr10 92632291 92632416 -47684349 + L2 LINE L2 3182 3313 0 1969 161 78 47 chr10 92632606 92632990 -47683775 - MSTD LTR MaLR 0 396 1 1908 167 3 13 chr10 92633042 92633354 -47683411 + AluJb SINE Alu 1 309 -3 666 35 0 0 chr10 92633354 92633439 -47683326 + (GGAAA)n Simple_repeat Simple_repeat 1 85 0 756 243 81 6 chr10 92633799 92633972 -47682793 - MER5A DNA MER1_type -3 186 1 1712 157 16 19 chr10 92634556 92634868 -47681897 + AluSx SINE Alu 1 311 -1 7958 229 52 56 chr10 92635313 92637059 -47679706 + L1M2 LINE L1 10 1746 -5103 2117 112 10 0 chr10 92637059 92637354 -47679411 + AluSx SINE Alu 7 304 -8 7958 229 52 56 chr10 92637354 92637986 -47678779 + L1M2 LINE L1 1746 2379 -4470 5662 141 15 1 chr10 92637995 92638911 -47677854 + L1MA4A LINE L1 5369 6297 -6 2024 79 16 0 chr10 92639054 92639308 -47677457 + AluSx SINE Alu 1 258 -54 571 289 92 4 chr10 92639363 92639591 -47677174 - MIR SINE MIR 0 262 15 271 216 54 117 chr10 92639594 92639705 -47677060 - L2 LINE L2 0 3313 3210 673 250 6 18 chr10 92641567 92641731 -47675034 - MER5A DNA MER1_type 0 189 28 243 255 20 10 chr10 92643069 92643169 -47673596 + (TTTG)n Simple_repeat Simple_repeat 1 101 0 26 74 0 0 chr10 92643330 92643384 -47673381 + AT_rich Low_complexity Low_complexity 1 54 0 1993 125 16 23 chr10 92649588 92649893 -47666872 + AluSx SINE Alu 1 303 -9 360 269 32 0 chr10 92650113 92650206 -47666559 - L1ME LINE L1 -614 5548 5453 270 300 9 36 chr10 92650314 92650424 -47666341 + CT-rich Low_complexity Low_complexity 2 108 0 1933 141 0 17 chr10 92650506 92650803 -47665962 + AluJb SINE Alu 1 292 -20 2010 68 0 4 chr10 92650918 92651168 -47665597 + AluY SINE Alu 45 293 -18 473 233 139 93 chr10 92651434 92651606 -47665159 - MER5A DNA MER1_type 0 189 10 2955 149 92 37 chr10 92651791 92652390 -47664375 + L1MB8 LINE L1 5546 6177 -1 1819 243 98 43 chr10 92652681 92652737 -47664028 - Zaphod DNA AcHobo -3397 634 583 2156 116 7 0 chr10 92652737 92653029 -47663736 + AluSc SINE Alu 3 296 -13 1819 243 98 43 chr10 92653029 92653572 -47663193 - Zaphod DNA AcHobo -3448 583 2 609 0 0 0 chr10 92654266 92654335 -47662430 - L1PA2 LINE L1 -4 6151 6083 41244 68 7 4 chr10 92654444 92660575 -47656190 + L1PA5 LINE L1 2 6150 -4 393 319 34 59 chr10 92660592 92660915 -47655850 + L1PA12 LINE L1 7 321 -7260 7378 172 18 64 chr10 92661472 92663117 -47653648 + L1P LINE L1 3824 5392 -754 664 251 78 17 chr10 92663117 92663324 -47653441 - L1MA9 LINE L1 -400 5912 5688 688 56 0 0 chr10 92663324 92663413 -47653352 + L1PA6 LINE L1 6066 6154 0 664 251 78 17 chr10 92663413 92663436 -47653329 - L1MA9 LINE L1 -624 5688 5668 5360 118 11 3 chr10 92663442 92664223 -47652542 + L1PA15 LINE L1 5374 6161 -4 6336 89 27 14 chr10 92664223 92665080 -47651685 + L1MA3 LINE L1 5417 6305 0 200 267 33 33 chr10 92665083 92665143 -47651622 + MER5A DNA MER1_type 49 108 -81 2678 122 53 107 chr10 92665178 92665616 -47651149 - MER4B LTR ERV1 -36 574 177 2305 119 0 0 chr10 92665616 92665927 -47650838 + AluSx SINE Alu 1 311 -1 2678 122 53 107 chr10 92665927 92666095 -47650670 - MER4B LTR ERV1 -433 177 1 652 277 45 13 chr10 92667136 92667375 -47649390 + L1ME1 LINE L1 5932 6330 -4 2908 81 98 5 chr10 92668116 92668526 -47648239 - LTR7 LTR ERV1 -2 448 1 518 253 6 63 chr10 92668530 92668704 -47648061 - MIR SINE MIR -39 223 60 200 308 132 0 chr10 92668988 92669079 -47647686 - MIR SINE MIR -65 143 41 320 330 34 0 chr10 92669181 92669299 -47647466 + MER5A DNA MER1_type 1 122 -67 565 245 148 79 chr10 92669308 92669500 -47647265 - LTR24B LTR ERV1 -2 574 397 1815 153 4 4 chr10 92669500 92669820 -47646945 - AluSx SINE Alu 0 320 1 565 245 148 79 chr10 92669820 92669925 -47646840 - LTR24B LTR ERV1 -179 397 301 2000 148 3 0 chr10 92669925 92670229 -47646536 + AluJb SINE Alu 1 305 -7 565 245 148 79 chr10 92670229 92670298 -47646467 - LTR24B LTR ERV1 -275 301 238 1745 106 0 0 chr10 92670298 92670525 -47646240 + AluSg SINE Alu 1 227 -83 565 245 148 79 chr10 92670525 92670689 -47646076 - LTR24B LTR ERV1 -338 238 4 183 318 53 71 chr10 92671578 92671748 -47645017 + MER5A DNA MER1_type 8 174 -15 762 150 60 0 chr10 92671903 92672036 -47644729 + FLAM_C SINE Alu 3 143 0 238 200 341 44 chr10 92672133 92672268 -47644497 + MER5A DNA MER1_type 9 183 -6 2412 81 10 0 chr10 92672831 92673138 -47643627 - AluSg SINE Alu 0 310 1 859 160 0 0 chr10 92674341 92674466 -47642299 + FLAM_C SINE Alu 1 125 -18 694 155 0 14 chr10 92674466 92674608 -47642157 + GA-rich Low_complexity Low_complexity 4 143 0 1840 168 3 13 chr10 92675731 92676046 -47640719 - AluJb SINE Alu 0 312 1 227 209 0 23 chr10 92676211 92676254 -47640511 + Tigger5 DNA MER2_type 27 68 -2255 1682 100 48 8 chr10 92676257 92676506 -47640259 + Tigger5 DNA MER2_type 2064 2322 -1 * 2669 165 58 13 chr10 92676506 92676954 -47639811 - MLT2B1 LTR ERVL -52 468 1 2504 75 0 0 chr10 92678624 92678929 -47637836 + AluY SINE Alu 1 305 -6 1341 119 24 5 chr10 92680225 92680435 -47636330 + L1MA8 LINE L1 6071 6284 -7 2208 169 137 26 chr10 92681397 92682004 -47634761 - MER39 LTR ERV1 0 707 1 264 252 138 50 chr10 92682306 92682465 -47634300 + MIR SINE MIR 18 190 -72 1251 279 73 90 chr10 92682467 92683267 -47633498 + L1MEd LINE L1 6 818 -5301 1825 114 15 0 chr10 92683267 92683529 -47633236 + AluSq SINE Alu 35 300 -13 1251 279 73 90 chr10 92683529 92683594 -47633171 + L1MEd LINE L1 818 883 -5236 2152 123 0 0 chr10 92683594 92683918 -47632847 + AluSx SINE Alu 1 324 0 1251 279 73 90 chr10 92683918 92684320 -47632445 + L1MEd LINE L1 883 1254 -4865 342 299 69 42 chr10 92684366 92684510 -47632255 + HAL1 LINE L1 1441 1588 -919 1082 204 35 9 chr10 92684524 92684755 -47632010 - L1MC4a LINE L1 0 7808 7572 2746 204 56 2 chr10 92685376 92685892 -47630873 - MER68 LTR ERV1 -8 554 11 1560 225 108 40 chr10 92685892 92686832 -47629933 - HERVL68-B1 LTR ERVL -7 3030 1993 797 184 0 7 chr10 92686839 92686980 -47629785 - LTR39 LTR ERV1 0 783 644 * 1486 126 13 0 chr10 92686971 92687201 -47629564 - LTR39 LTR ERV1 -550 233 1 513 183 114 0 chr10 92687209 92687340 -47629425 - HERVL68-B1 LTR ERVL -1055 1982 1837 942 239 169 55 chr10 92687344 92687872 -47628893 + LTR48B LTR ERV1 7 643 -1 1321 213 4 16 chr10 92687872 92688126 -47628639 - HERVL68-B1 LTR ERVL -1203 1834 1584 1027 214 107 81 chr10 92688130 92688551 -47628214 + MER34B LTR ERV1 5 436 -129 3151 92 10 51 chr10 92688553 92688663 -47628102 - LTR15 LTR ERV1 -25 468 355 2201 93 0 3 chr10 92688663 92688952 -47627813 - AluSc SINE Alu -21 288 1 3151 92 10 51 chr10 92688952 92689329 -47627436 - LTR15 LTR ERV1 -138 355 1 2074 131 0 3 chr10 92689381 92689672 -47627093 + AluJb SINE Alu 1 290 -22 2051 206 46 28 chr10 92689761 92690257 -47626508 - HERVL68-B1 LTR ERVL -1534 1503 999 2769 213 24 64 chr10 92690264 92690939 -47625826 + MER72 LTR ERV1 1 648 -74 381 173 67 0 chr10 92690939 92691014 -47625751 - LTR8A LTR ERV1 0 727 648 2488 89 3 46 chr10 92691017 92691388 -47625377 + MER4A LTR ERV1 3 357 -307 2692 149 52 17 chr10 92691397 92691874 -47624891 + MER50 LTR ERV1 1 494 -240 268 61 0 0 chr10 92691894 92691927 -47624838 - MER4A LTR ERV1 -498 166 134 * 1541 128 10 102 chr10 92691917 92692038 -47624727 + MER50 LTR ERV1 434 565 -169 1976 98 0 4 chr10 92692038 92692303 -47624462 + AluY SINE Alu 33 296 -15 1541 128 10 102 chr10 92692303 92692494 -47624271 + MER50 LTR ERV1 565 717 -17 1693 114 23 7 chr10 92692522 92692830 -47623935 + MER4E LTR ERV1 355 779 0 2971 172 53 43 chr10 92692830 92692908 -47623857 - LTR8A LTR ERV1 -77 650 574 2144 129 0 0 chr10 92692908 92693211 -47623554 - AluSg SINE Alu -5 305 3 2971 172 53 43 chr10 92693211 92693776 -47622989 - LTR8A LTR ERV1 -153 574 1 545 101 0 13 chr10 92693776 92693853 -47622912 + MER72 LTR ERV1 645 720 -2 1576 183 10 113 chr10 92693851 92693871 -47622894 - MER21B LTR ERV1 -394 469 449 3957 143 26 37 chr10 92693871 92694513 -47622252 + MER41B LTR ERV1 1 635 0 1576 183 10 113 chr10 92694513 92694679 -47622086 - MER21B LTR ERV1 -414 449 347 3981 121 8 0 chr10 92694679 92695202 -47621563 + MER1A DNA MER1_type 1 527 0 1576 183 10 113 chr10 92695202 92695429 -47621336 - MER21B LTR ERV1 -516 347 98 414 235 0 12 chr10 92695477 92695562 -47621203 - MER21B LTR ERV1 -775 88 5 4958 137 39 5 chr10 92696560 92697364 -47619401 + L1MA4 LINE L1 5420 6250 -50 28 61 0 0 chr10 92697648 92697697 -47619068 + AT_rich Low_complexity Low_complexity 1 49 0 210 91 0 0 chr10 92698131 92698164 -47618601 + (TC)n Simple_repeat Simple_repeat 2 34 0 399 21 0 0 chr10 92698164 92698212 -47618553 + (CA)n Simple_repeat Simple_repeat 1 48 0 279 291 85 37 chr10 92698292 92698457 -47618308 - MIR SINE MIR -62 200 35 510 352 97 11 chr10 92698705 92698881 -47617884 + MER91A DNA MER1_type 1 191 -5 843 95 48 16 chr10 92698916 92699042 -47617723 - AluSp SINE Alu -183 130 1 1421 195 29 93 chr10 92699122 92699532 -47617233 - MLT1B LTR MaLR 0 390 7 369 156 0 78 chr10 92700142 92700219 -47616546 + MER92B LTR ERV1 1 71 -565 1974 148 0 28 chr10 92700230 92700547 -47616218 - AluJb SINE Alu 0 312 5 2393 81 7 0 chr10 92701843 92702141 -47614624 + AluY SINE Alu 1 300 -11 289 61 20 20 chr10 92702987 92703036 -47613729 + (TA)n Simple_repeat Simple_repeat 1 49 0 9697 39 4 0 chr10 92703657 92704828 -47611937 - L1PA5 LINE L1 -850 5296 4121 7263 42 22 8 chr10 92704828 92705685 -47611080 + L1PA5 LINE L1 5283 6154 0 1399 193 15 22 chr10 92706172 92706441 -47610324 - AluJo SINE Alu -17 295 29 323 155 12 0 chr10 92707213 92707297 -47609468 + (CA)n Simple_repeat Simple_repeat 2 86 0 621 229 39 58 chr10 92708397 92708555 -47608210 - MER3 DNA MER1_type 0 209 54 1767 161 3 32 chr10 92708555 92708866 -47607899 - AluJo SINE Alu 0 312 11 621 229 39 58 chr10 92708866 92708912 -47607853 - MER3 DNA MER1_type -155 54 9 952 183 46 73 chr10 92708920 92709078 -47607687 - MER20 DNA MER1_type -1 218 65 1990 121 7 7 chr10 92709078 92709383 -47607382 + AluSx SINE Alu 1 305 0 952 183 46 73 chr10 92709383 92709442 -47607323 - MER20 DNA MER1_type -154 65 6 1397 132 24 5 chr10 92710205 92710418 -47606347 + L1PA15 LINE L1 5797 6013 -152 2623 46 0 7 chr10 92711394 92711701 -47605064 + AluY SINE Alu 1 305 -6 263 281 230 7 chr10 92712101 92712240 -47604525 - MER5A DNA MER1_type -11 178 9 601 181 31 114 chr10 92712257 92712450 -47604315 - MER5B DNA MER1_type -1 177 1 200 263 121 50 chr10 92712451 92712550 -47604215 - MIR3 SINE MIR -49 159 54 525 296 48 11 chr10 92713478 92713667 -47603098 - MIR SINE MIR -54 208 13 2112 135 3 3 chr10 92714249 92714560 -47602205 + AluSx SINE Alu 1 311 -1 1259 201 12 16 chr10 92714922 92715171 -47601594 + MER90 LTR ERV1 123 370 -205 354 247 0 0 chr10 92715177 92715250 -47601515 - MLT1J2 LTR MaLR -344 106 34 1010 277 63 70 chr10 92716615 92717103 -47599662 - LTR33 LTR ERVL -32 489 5 1054 181 11 6 chr10 92717568 92717750 -47599015 + MER5A DNA MER1_type 6 188 -1 2456 70 0 3 chr10 92718098 92718400 -47598365 + AluY SINE Alu 1 301 -10 1786 148 14 3 chr10 92718781 92719071 -47597694 - AluJb SINE Alu -13 299 7 298 384 111 17 chr10 92719297 92719469 -47597296 + MER91A DNA MER1_type 1 188 -8 1785 148 57 10 chr10 92720116 92720414 -47596351 - AluSx SINE Alu 0 312 1 187 75 0 50 chr10 92720473 92720513 -47596252 + (TTATA)n Simple_repeat Simple_repeat 4 41 0 2850 167 47 0 chr10 92723134 92723578 -47593187 + LTR24 LTR ERV1 1 465 -2 833 201 0 35 chr10 92724374 92724543 -47592222 - FAM SINE Alu -13 172 10 243 103 0 0 chr10 92725282 92725321 -47591444 + (TG)n Simple_repeat Simple_repeat 2 40 0 2555 53 0 7 chr10 92725381 92725685 -47591080 + AluY SINE Alu 1 302 -9 209 262 0 0 chr10 92726112 92726154 -47590611 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 225 250 125 0 chr10 92726157 92726237 -47590528 + L1MC4 LINE L1 7924 8013 -29 2249 108 0 0 chr10 92726459 92726755 -47590010 - AluSx SINE Alu -16 296 1 569 192 108 8 chr10 92727002 92727132 -47589633 + L1MD2 LINE L1 6197 6339 -20 23 33 0 0 chr10 92728025 92728055 -47588710 + AT_rich Low_complexity Low_complexity 1 30 0 348 268 33 65 chr10 92728296 92728316 -47588449 - MER5B DNA MER1_type -23 155 136 2548 63 3 16 chr10 92728316 92728631 -47588134 - AluSp SINE Alu 0 313 3 348 268 33 65 chr10 92728631 92728763 -47588002 - MER5B DNA MER1_type -42 136 8 214 309 107 48 chr10 92728790 92728874 -47587891 - MIR SINE MIR -72 136 48 1763 147 3 11 chr10 92729576 92729861 -47586904 - AluJo SINE Alu -27 285 3 2234 108 3 3 chr10 92729868 92730175 -47586590 - AluSc SINE Alu -2 307 1 180 176 59 39 chr10 92730215 92730266 -47586499 - MIR SINE MIR 0 262 211 2222 112 10 0 chr10 92731800 92732103 -47584662 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr10 92732241 92732276 -47584489 + AT_rich Low_complexity Low_complexity 1 35 0 411 292 88 26 chr10 92732285 92732386 -47584379 - MIR SINE MIR -12 250 157 1755 153 163 3 chr10 92732386 92732686 -47584079 - MER7A DNA MER2_type 0 346 1 411 292 88 26 chr10 92732686 92732776 -47583989 - MIR SINE MIR -105 157 47 225 0 0 0 chr10 92732927 92732952 -47583813 + (TA)n Simple_repeat Simple_repeat 2 26 0 4554 167 12 61 chr10 92732985 92733272 -47583493 - L1MB5 LINE L1 0 6174 5875 5350 164 34 22 chr10 92733272 92734163 -47582602 - MER54A LTR ERVL 0 901 1 4554 167 12 61 chr10 92734163 92734579 -47582186 - L1MB5 LINE L1 -299 5875 5528 2272 181 32 45 chr10 92734579 92735042 -47581723 - MSTB2 LTR MaLR 0 457 1 4554 167 12 61 chr10 92735042 92735303 -47581462 - L1MB5 LINE L1 -646 5528 5256 517 247 130 36 chr10 92735429 92735645 -47581120 - L1P4 LINE L1 -304 5817 5599 39 22 0 0 chr10 92735653 92735699 -47581066 + AT_rich Low_complexity Low_complexity 1 46 0 240 294 0 6 chr10 92735764 92735855 -47580910 - L1P4 LINE L1 -663 5492 5404 822 189 0 0 chr10 92735869 92735991 -47580774 - FLAM_C SINE Alu -12 131 10 6939 182 23 16 chr10 92736220 92736416 -47580349 - L1MB3 LINE L1 -1 6182 5989 3942 62 9 0 chr10 92736416 92736870 -47579895 + LTR22A LTR ERVK 1 458 0 6939 182 23 16 chr10 92736870 92738007 -47578758 - L1MB3 LINE L1 -194 5989 4825 1313 219 47 77 chr10 92738007 92738409 -47578356 + MLT1B LTR MaLR 1 390 0 6939 182 23 16 chr10 92738409 92739421 -47577344 - L1MB3 LINE L1 -1358 4825 3821 2155 116 3 17 chr10 92739448 92739749 -47577016 - AluSx SINE Alu -15 297 1 657 246 68 14 chr10 92739749 92739956 -47576809 + L1MD2 LINE L1 5922 6139 -220 700 191 27 14 chr10 92739965 92740112 -47576653 + L1MD2 LINE L1 6195 6343 -16 408 296 128 0 chr10 92740290 92740462 -47576303 - MIR SINE MIR -44 218 25 1713 222 54 86 chr10 92742337 92742990 -47573775 + MER72 LTR ERV1 1 632 -90 1632 154 14 31 chr10 92743011 92743303 -47573462 + AluJb SINE Alu 9 295 -17 188 314 57 76 chr10 92743364 92743469 -47573296 - L2 LINE L2 -51 3221 3119 2240 195 86 25 chr10 92743748 92744224 -47572541 - MLT1D LTR MaLR 0 505 1 935 71 0 0 chr10 92744394 92744507 -47572258 - L1PA11 LINE L1 -2 6172 6060 4914 76 107 0 chr10 92744522 92745142 -47571623 + LTR12 LTR ERV1 1 686 -2 23476 91 10 5 chr10 92745144 92748266 -47568499 + HERV9 LTR ERV1 1 3139 -5260 6396 96 5 8 chr10 92748273 92749141 -47567624 + HERV9 LTR ERV1 4080 4944 -3455 1947 149 85 54 chr10 92749126 92749878 -47566887 + HERV17 LTR ERV1 745 1720 -5176 * 4865 92 0 2 chr10 92749872 92750517 -47566248 + HERV17 LTR ERV1 7756 8399 0 5458 88 122 0 chr10 92750517 92751253 -47565512 + LTR12 LTR ERV1 1 826 0 1370 92 25 0 chr10 92751253 92751449 -47565316 - L1PA11 LINE L1 -107 6067 5867 527 154 58 19 chr10 92751449 92751553 -47565212 - Charlie5 DNA MER1_type -258 2354 2247 26 0 0 0 chr10 92751559 92751585 -47565180 + AT_rich Low_complexity Low_complexity 1 26 0 231 289 0 0 chr10 92751585 92751637 -47565128 - Charlie5 DNA MER1_type -2559 53 2 589 172 6 112 chr10 92751658 92751768 -47564997 + MER96B DNA MER1_type? 24 111 -306 1786 147 0 69 chr10 92751768 92752088 -47564677 + AluJb SINE Alu 1 298 -14 589 172 6 112 chr10 92752088 92752146 -47564619 + MER96B DNA MER1_type? 111 174 -243 341 318 19 0 chr10 92752148 92752255 -47564510 + L2 LINE L2 3201 3309 -4 277 266 241 25 chr10 92752350 92752549 -47564216 + L1MC/D LINE L1 5491 5732 -2076 368 181 157 0 chr10 92752572 92752681 -47564084 + FLAM_C SINE Alu 20 141 0 409 304 118 14 chr10 92753967 92754187 -47562578 + MIR SINE MIR 17 259 -3 2189 86 0 7 chr10 92754236 92754527 -47562238 - AluSg SINE Alu -21 289 1 257 0 30 0 chr10 92754574 92754607 -47562158 + (CAA)n Simple_repeat Simple_repeat 3 36 0 21 0 0 0 chr10 92757009 92757030 -47559735 + AT_rich Low_complexity Low_complexity 1 21 0 282 286 0 0 chr10 92757046 92757109 -47559656 - MIR SINE MIR -6 256 194 25 83 0 0 chr10 92758488 92758548 -47558217 + AT_rich Low_complexity Low_complexity 1 60 0 247 237 40 53 chr10 92758870 92758946 -47557819 - MER5A DNA MER1_type -106 83 9 710 230 46 23 chr10 92758961 92759135 -47557630 - MER5B DNA MER1_type 0 178 1 289 322 76 8 chr10 92759829 92759947 -47556818 - MIR3 SINE MIR -12 196 71 1359 275 79 7 chr10 92760314 92760717 -47556048 + LTR16B LTR ERVL 1 432 -32 1772 176 3 13 chr10 92760857 92761159 -47555606 + AluSx SINE Alu 1 299 -13 1393 182 23 101 chr10 92761220 92761616 -47555149 - MLT1A1 LTR MaLR 0 365 1 716 324 28 4 chr10 92762516 92762766 -47553999 - MIR SINE MIR -4 258 3 227 196 0 36 chr10 92763254 92763267 -47553498 + G-rich Low_complexity Low_complexity 3 15 -41 631 117 0 0 chr10 92763267 92763361 -47553404 + L1MA8 LINE L1 6194 6287 -4 227 196 0 36 chr10 92763361 92763403 -47553362 + G-rich Low_complexity Low_complexity 15 56 0 266 305 29 19 chr10 92763760 92763865 -47552900 + GA-rich Low_complexity Low_complexity 2 107 0 644 276 59 71 chr10 92766030 92766367 -47550398 - L2 LINE L2 0 3313 2981 316 195 12 24 chr10 92767459 92767541 -47549224 + L1MC5 LINE L1 7827 7907 -54 26 50 0 0 chr10 92767701 92767741 -47549024 + AT_rich Low_complexity Low_complexity 1 40 0 355 234 129 48 chr10 92768335 92768459 -47548306 + MIR SINE MIR 115 248 -14 2255 102 0 0 chr10 92769297 92769590 -47547175 - AluY SINE Alu -18 293 1 214 250 0 18 chr10 92770656 92770712 -47546053 + MIR3 SINE MIR 154 208 0 195 323 0 0 chr10 92771834 92771896 -47544869 + MIR SINE MIR 201 262 0 477 249 73 40 chr10 92773075 92773252 -47543513 - MER5A DNA MER1_type 0 189 7 231 361 74 19 chr10 92773232 92773340 -47543425 + L2 LINE L2 3151 3264 -8 * 232 343 149 41 chr10 92773423 92773811 -47542954 + L2 LINE L2 2216 2645 -669 209 262 115 0 chr10 92774880 92774941 -47541824 + MIR SINE MIR 119 186 -76 889 45 36 0 chr10 92774974 92775086 -47541679 + MER30 DNA MER1_type 3 118 -112 585 97 18 26 chr10 92775089 92775202 -47541563 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 731 177 16 0 chr10 92775202 92775326 -47541439 + MER30 DNA MER1_type 105 230 0 342 260 30 65 chr10 92775669 92775838 -47540927 - MIR SINE MIR -70 192 30 1512 190 47 7 chr10 92776445 92776745 -47540020 + MER58B DNA MER1_type 30 341 0 1977 132 16 22 chr10 92778083 92778394 -47538371 + AluJb SINE Alu 1 309 -3 485 243 28 0 chr10 92778526 92778633 -47538132 + MER81 DNA DNA 5 114 0 576 258 43 17 chr10 92779616 92779798 -47536967 - MIR3 SINE MIR -19 189 5 232 163 23 0 chr10 92782514 92782557 -47534208 + L1ME4a LINE L1 5623 5666 -455 496 270 40 22 chr10 92782696 92782922 -47533843 + L1ME4a LINE L1 5718 5947 -174 39157 84 10 8 chr10 92782935 92789063 -47527702 + L1PA6 LINE L1 15 6154 0 183 156 0 0 chr10 92789197 92789229 -47527536 + (TG)n Simple_repeat Simple_repeat 1 32 0 5426 197 18 21 chr10 92789612 92789711 -47527054 + MER45B DNA AcHobo 1 99 -1482 2283 84 0 0 chr10 92789711 92789985 -47526780 - AluSq SINE Alu -19 294 21 5426 197 18 21 chr10 92789985 92790927 -47525838 + MER45B DNA AcHobo 99 1039 -1 462 250 125 0 chr10 92790979 92791115 -47525650 - LTR16A LTR ERVL -24 426 274 249 250 53 45 chr10 92791148 92791280 -47525485 - LTR16A LTR ERVL -259 191 59 2220 162 29 6 chr10 92791699 92792039 -47524726 + MER7A DNA MER2_type 1 346 0 700 156 32 18 chr10 92792060 92792234 -47524531 - MER20 DNA MER1_type -1 218 1 189 74 0 0 chr10 92792300 92792327 -47524438 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1315 156 70 47 chr10 92792333 92792590 -47524175 - AluJb SINE Alu -38 274 12 434 350 102 40 chr10 92792806 92793229 -47523536 + L2 LINE L2 2804 3252 -20 212 162 0 0 chr10 92793239 92793276 -47523489 + GA-rich Low_complexity Low_complexity 3 39 0 269 316 11 11 chr10 92794027 92794122 -47522643 + MIR SINE MIR 51 145 -63 374 143 0 48 chr10 92794140 92794203 -47522562 - MLT1I LTR MaLR 0 409 350 328 233 7 25 chr10 92794426 92794570 -47522195 + MIR SINE MIR 64 262 0 4457 68 3 16 chr10 92794831 92795400 -47521365 - L1PA10 LINE L1 0 6168 5607 2565 88 3 3 chr10 92795402 92795895 -47520870 + L1PA10 LINE L1 5125 5617 -551 227 111 0 22 chr10 92797671 92797716 -47519049 + (TG)n Simple_repeat Simple_repeat 1 44 0 348 64 0 0 chr10 92797800 92797847 -47518918 + (TG)n Simple_repeat Simple_repeat 2 48 0 201 39 0 0 chr10 92797883 92797909 -47518856 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 256 196 112 84 chr10 92797911 92797954 -47518811 + MIR3 SINE MIR 51 91 -117 2110 123 3 3 chr10 92797954 92798255 -47518510 + AluSq SINE Alu 1 301 -12 256 196 112 84 chr10 92798255 92798318 -47518447 + MIR3 SINE MIR 91 160 -48 2168 104 0 64 chr10 92798738 92799065 -47517700 + AluSx SINE Alu 1 306 -6 645 115 0 0 chr10 92799074 92799170 -47517595 - L1P4 LINE L1 -551 5617 5522 200 310 80 53 chr10 92799564 92799677 -47517088 + L2 LINE L2 2638 2753 -561 576 268 72 65 chr10 92801100 92801503 -47515262 + MLT1J LTR MaLR 56 461 -50 391 293 34 56 chr10 92801777 92802043 -47514722 + L1ME4a LINE L1 5002 5261 -885 480 206 0 39 chr10 92802050 92802152 -47514613 - L2 LINE L2 0 3313 3216 1598 238 63 30 chr10 92802153 92802661 -47514104 + MLT1E LTR MaLR 1 525 -68 369 260 178 62 chr10 92803992 92804346 -47512419 + MLT1L LTR MaLR 40 434 -181 483 267 68 7 chr10 92804347 92804493 -47512272 + MIR SINE MIR 48 202 -60 575 261 8 8 chr10 92804561 92804695 -47512070 - L2 LINE L2 0 3313 3180 375 245 90 20 chr10 92804846 92805046 -47511719 + Charlie8 DNA MER1_type 40 253 -2164 555 329 63 28 chr10 92805579 92805898 -47510867 + L1ME4a LINE L1 5556 5885 -236 275 322 56 7 chr10 92806579 92806722 -47510043 - MIR SINE MIR -42 220 71 1852 137 4 0 chr10 92807145 92807401 -47509364 + AluSx SINE Alu 1 257 -55 237 286 65 0 chr10 92808015 92808092 -47508673 + MIR3 SINE MIR 86 167 -41 3160 201 29 43 chr10 92809394 92810453 -47506312 - L1ME2 LINE L1 -2 6162 5119 1034 198 52 147 chr10 92810458 92810778 -47505987 + L1M4 LINE L1 4324 4673 -1473 2295 122 0 0 chr10 92810778 92811090 -47505675 - AluSx SINE Alu 0 312 1 1034 198 52 147 chr10 92811090 92811108 -47505657 + L1M4 LINE L1 4673 4691 -1455 1942 185 0 3 chr10 92811108 92811416 -47505349 - AluJb SINE Alu -5 307 1 1034 198 52 147 chr10 92811416 92811653 -47505112 + L1M4 LINE L1 4691 4845 -1301 383 229 77 29 chr10 92811654 92811824 -47504941 + L1M4 LINE L1 4935 5112 -1034 314 320 50 3 chr10 92813028 92813221 -47503544 - MIR SINE MIR 0 262 14 306 319 84 17 chr10 92813231 92813350 -47503415 + L2 LINE L2 3139 3265 -7 201 231 0 19 chr10 92814345 92814397 -47502368 + L2 LINE L2 3263 3313 0 309 336 16 16 chr10 92814756 92814881 -47501884 + L2 LINE L2 3143 3267 -5 2498 79 3 0 chr10 92815582 92815887 -47500878 + AluSp SINE Alu 3 308 -5 182 118 29 0 chr10 92816150 92816184 -47500581 + C-rich Low_complexity Low_complexity 3 37 0 468 272 18 0 chr10 92816385 92816499 -47500266 - LTR33 LTR ERVL -105 416 301 376 172 0 50 chr10 92816626 92816725 -47500040 - LTR33 LTR ERVL -414 107 14 273 184 149 23 chr10 92817352 92817439 -47499326 + MIR SINE MIR 65 162 -100 354 264 9 19 chr10 92817939 92818045 -47498720 + MIR SINE MIR 158 262 0 337 330 105 5 chr10 92818551 92818742 -47498023 + MIR SINE MIR 34 243 -19 315 105 0 0 chr10 92819941 92819998 -47496767 + (TG)n Simple_repeat Simple_repeat 2 58 0 240 111 0 0 chr10 92820530 92820566 -47496199 + (A)n Simple_repeat Simple_repeat 1 36 0 1769 161 3 13 chr10 92820794 92821093 -47495672 + AluJo SINE Alu 2 297 -15 1346 183 38 98 chr10 92821243 92821641 -47495124 - MLT1A2 LTR MaLR 0 374 1 1044 192 0 0 chr10 92821877 92822049 -47494716 + FAM SINE Alu 2 173 -2 379 281 9 18 chr10 92822081 92822195 -47494570 - MIR SINE MIR -1 261 149 * 397 195 24 140 chr10 92822189 92822300 -47494465 + MIR SINE MIR 5 93 -169 639 202 0 31 chr10 92822300 92822429 -47494336 + FLAM_A SINE Alu 2 126 -7 397 195 24 140 chr10 92822429 92822481 -47494284 + MIR SINE MIR 93 149 -113 293 238 177 33 chr10 92822498 92822679 -47494086 + MER46C DNA MER2_type 34 240 -98 235 299 46 23 chr10 92822743 92822830 -47493935 + MIR SINE MIR 174 262 0 522 276 41 28 chr10 92822841 92822986 -47493779 - MIR SINE MIR -108 154 8 987 164 72 19 chr10 92823413 92823621 -47493144 + MER20 DNA MER1_type 1 219 0 234 333 32 13 chr10 92823979 92824135 -47492630 - L2 LINE L2 -293 2979 2821 1017 206 0 11 chr10 92824712 92825020 -47491745 + AluJo SINE Alu 110 415 0 2126 127 0 43 chr10 92825559 92825809 -47490956 + L1P5 LINE L1 5420 5650 -506 2136 112 6 35 chr10 92825809 92826122 -47490643 + AluSx SINE Alu 1 304 -8 2126 127 0 43 chr10 92826122 92826242 -47490523 + L1P5 LINE L1 5650 5774 -382 352 351 53 16 chr10 92826483 92826671 -47490094 - MIR SINE MIR -50 212 18 * 363 253 96 27 chr10 92826662 92826808 -47489957 + MIR SINE MIR 107 262 0 266 312 97 19 chr10 92826996 92827150 -47489615 - L3 LINE CR1 -620 957 792 25 0 0 0 chr10 92827528 92827553 -47489212 + AT_rich Low_complexity Low_complexity 1 25 0 385 124 13 39 chr10 92827580 92827678 -47489087 + L1PB4 LINE L1 5782 5857 -299 424 202 0 11 chr10 92827678 92827747 -47489018 + L1PB4 LINE L1 6062 6149 -7 423 281 62 31 chr10 92828585 92828809 -47487956 + MARNA DNA Mariner 149 379 -207 1629 168 4 11 chr10 92828831 92829147 -47487618 - AluJb SINE Alu 0 319 6 2098 194 80 33 chr10 92829802 92830353 -47486412 - MER21B LTR ERV1 -112 751 175 212 98 0 24 chr10 92830875 92830916 -47485849 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr10 92831020 92831042 -47485723 + AT_rich Low_complexity Low_complexity 1 22 0 980 72 0 65 chr10 92831958 92832097 -47484668 + AluSp SINE Alu 1 130 -183 426 269 229 49 chr10 92832352 92832719 -47484046 + MLT1K LTR MaLR 69 527 -61 1980 123 0 0 chr10 92832719 92832995 -47483770 - AluSp SINE Alu 0 313 38 426 269 229 49 chr10 92832995 92833059 -47483706 + MLT1K LTR MaLR 527 578 -10 198 277 36 60 chr10 92833114 92833197 -47483568 - MIR SINE MIR -109 99 19 429 319 89 20 chr10 92833748 92833996 -47482769 + L1MC2 LINE L1 5523 5787 -2021 883 254 116 84 chr10 92834013 92834577 -47482188 + HAL1 LINE L1 19 563 -1944 2070 94 3 18 chr10 92834577 92834863 -47481902 + AluSx SINE Alu 1 282 -30 225 0 0 0 chr10 92834868 92834893 -47481872 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 883 254 116 84 chr10 92834893 92834975 -47481790 + HAL1 LINE L1 566 692 -1815 1323 145 17 0 chr10 92835008 92835243 -47481522 - Tigger5 DNA MER2_type 0 2323 2085 1131 186 9 27 chr10 92835233 92835454 -47481311 - Tigger5 DNA MER2_type -2085 238 22 * 270 282 28 0 chr10 92835498 92835569 -47481196 + HAL1 LINE L1 795 867 -1640 726 258 72 13 chr10 92835748 92836066 -47480699 + HAL1 LINE L1 973 1309 -1198 546 262 134 14 chr10 92836096 92836547 -47480218 + L1ME LINE L1 4951 5442 -722 937 149 65 51 chr10 92836547 92836761 -47480004 + L1MC2 LINE L1 6119 6335 -9 258 281 31 0 chr10 92837104 92837168 -47479597 - MIR SINE MIR -112 96 31 1383 172 31 92 chr10 92837539 92837865 -47478900 + AluJb SINE Alu 1 306 -6 676 237 11 11 chr10 92838105 92838291 -47478474 + L1MB3 LINE L1 31 216 -6647 * 2681 151 11 2 chr10 92838268 92838746 -47478019 + L1MB3 LINE L1 1392 1873 -4990 26 0 0 0 chr10 92838752 92838778 -47477987 + AT_rich Low_complexity Low_complexity 1 26 0 1757 106 4 0 chr10 92838784 92839020 -47477745 + AluSp SINE Alu 1 237 -76 8544 202 11 13 chr10 92839023 92841071 -47475694 + L1MB3 LINE L1 3565 5608 -1254 1340 163 0 0 chr10 92841071 92841267 -47475498 + AluSg/x SINE Alu 92 287 -25 595 255 25 46 chr10 92841288 92841484 -47475281 + L2 LINE L2 3109 3300 -13 2193 112 16 3 chr10 92841680 92841985 -47474780 + AluSg SINE Alu 1 309 -1 301 255 170 7 chr10 92844560 92844713 -47472052 - L1ME4a LINE L1 -5 6116 5939 1709 101 4 32 chr10 92844716 92844964 -47471801 + AluY SINE Alu 71 311 0 30947 94 8 21 chr10 92844970 92851255 -47465510 + L1PA7 LINE L1 12 6154 0 3046 152 22 0 chr10 92851273 92851768 -47464997 + L1MB3 LINE L1 6310 6815 -84 2751 233 70 29 chr10 92851781 92852598 -47464167 + MER21B LTR ERV1 3 852 -11 529 118 0 0 chr10 92852608 92852693 -47464072 + L1MB3 LINE L1 6815 6899 0 483 277 38 13 chr10 92852722 92852881 -47463884 - L1ME4a LINE L1 -234 5887 5725 25 65 0 0 chr10 92853063 92853109 -47463656 + AT_rich Low_complexity Low_complexity 1 46 0 242 322 101 13 chr10 92853378 92853527 -47463238 - L2 LINE L2 -925 2389 2228 294 268 94 63 chr10 92853561 92853688 -47463077 - MER5A DNA MER1_type -40 149 19 251 297 59 0 chr10 92853742 92853843 -47462922 - L2 LINE L2 -1204 2110 2004 1284 202 30 72 chr10 92853869 92854218 -47462547 - MLT1A2 LTR MaLR 0 374 39 2237 110 0 10 chr10 92854323 92854661 -47462104 + AluSx SINE Alu 4 312 0 700 83 0 0 chr10 92855404 92855488 -47461277 + AluSg SINE Alu 35 118 -192 228 256 51 39 chr10 92855963 92856041 -47460724 + MIR3 SINE MIR 82 160 -48 333 184 194 39 chr10 92856081 92856131 -47460634 + MER102a DNA MER1_type 32 73 -2344 1974 93 52 7 chr10 92856131 92856564 -47460201 + AluSg SINE Alu 1 445 0 333 184 194 39 chr10 92856564 92856615 -47460150 + MER102a DNA MER1_type 73 150 -2267 326 296 0 0 chr10 92857149 92857237 -47459528 + MER102a DNA MER1_type 221 308 -22 326 287 23 0 chr10 92857412 92857499 -47459266 + L2 LINE L2 3220 3308 -5 630 212 0 17 chr10 92857580 92857698 -47459067 - FLAM_A SINE Alu -11 131 16 301 217 19 47 chr10 92857857 92857963 -47458802 - L1MC4 LINE L1 -1326 6716 6614 582 159 0 0 chr10 92857965 92858072 -47458693 + (TA)n Simple_repeat Simple_repeat 1 107 0 228 173 0 0 chr10 92858073 92858125 -47458640 - L1MC4 LINE L1 -1339 6703 6652 185 329 12 24 chr10 92858319 92858401 -47458364 - L2 LINE L2 -30 3283 3203 275 215 285 28 chr10 92858534 92858701 -47458064 - MIR SINE MIR -13 249 39 195 114 0 0 chr10 92858768 92858803 -47457962 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 4098 154 66 96 chr10 92858810 92859750 -47457015 + MER21A LTR ERV1 18 929 -2 209 327 33 40 chr10 92860078 92860228 -47456537 - L2 LINE L2 -92 3221 3073 2005 115 0 0 chr10 92860234 92860504 -47456261 + AluSx SINE Alu 1 270 -42 1415 97 20 0 chr10 92860604 92860799 -47455966 + AluSg/x SINE Alu 98 296 -14 433 322 39 28 chr10 92860817 92860997 -47455768 - L2 LINE L2 -282 3031 2850 1379 199 97 41 chr10 92861139 92861687 -47455078 - LTR9B LTR ERV1 -32 582 4 320 297 62 105 chr10 92861736 92862059 -47454706 + L2 LINE L2 2964 3272 0 286 314 126 31 chr10 92862143 92862334 -47454431 - MIR SINE MIR -19 243 35 228 263 154 13 chr10 92862678 92862834 -47453931 + L1ME4a LINE L1 5914 6091 -30 820 168 0 29 chr10 92862855 92862992 -47453773 + FLAM_A SINE Alu 1 133 0 5683 161 34 24 chr10 92863007 92863597 -47453168 + L1MC1 LINE L1 5282 5888 -445 1918 102 0 0 chr10 92863597 92863851 -47452914 + AluSc SINE Alu 41 294 -15 5683 161 34 24 chr10 92863851 92864296 -47452469 + L1MC1 LINE L1 5888 6327 -6 2266 109 156 153 chr10 92864629 92865289 -47451476 - MER4A LTR ERV1 0 664 3 357 338 32 7 chr10 92865596 92865750 -47451015 - MIR SINE MIR 0 262 105 413 335 99 0 chr10 92865833 92865994 -47450771 + MER91A DNA MER1_type 1 177 -19 59 27 0 0 chr10 92866245 92866318 -47450447 + AT_rich Low_complexity Low_complexity 1 73 0 1508 182 43 32 chr10 92866472 92866818 -47449947 + L1MB5 LINE L1 5801 6150 -24 57 28 0 0 chr10 92866938 92867009 -47449756 + AT_rich Low_complexity Low_complexity 1 71 0 2373 84 7 0 chr10 92867241 92867539 -47449226 - AluSx SINE Alu -12 300 1 1692 159 43 45 chr10 92868043 92868105 -47448660 - L1MB7 LINE L1 -19 6165 6104 2433 59 0 10 chr10 92868105 92868411 -47448354 - AluY SINE Alu -8 303 1 1692 159 43 45 chr10 92868411 92868700 -47448065 - L1MB7 LINE L1 -80 6104 5815 1902 118 4 32 chr10 92868827 92869107 -47447658 + AluSx SINE Alu 28 299 -13 180 302 0 0 chr10 92869508 92869561 -47447204 + L2 LINE L2 3002 3054 -218 201 192 0 19 chr10 92869828 92869880 -47446885 + (TTAA)n Simple_repeat Simple_repeat 4 54 0 210 111 22 22 chr10 92870827 92870872 -47445893 + T-rich Low_complexity Low_complexity 2 46 0 460 263 26 18 chr10 92871019 92871133 -47445632 + L2 LINE L2 3199 3313 0 32 26 0 0 chr10 92871408 92871447 -47445318 + AT_rich Low_complexity Low_complexity 1 39 0 425 322 34 27 chr10 92871641 92871790 -47444975 + MIR3 SINE MIR 34 183 -25 1734 137 0 67 chr10 92872218 92872533 -47444232 + AluJb SINE Alu 1 294 -18 369 269 132 18 chr10 92874006 92874173 -47442592 + MIR SINE MIR 8 193 -69 373 232 236 7 chr10 92874363 92874503 -47442262 + MER5A DNA MER1_type 7 167 -11 1850 81 0 4 chr10 92874543 92874777 -47441988 - AluSg SINE Alu -25 285 53 881 168 0 76 chr10 92874844 92875029 -47441736 - FRAM SINE Alu 0 40 1 1748 185 0 6 chr10 92875709 92876023 -47440742 - AluJo SINE Alu 0 312 1 208 306 8 97 chr10 92876454 92876534 -47440231 + MIR SINE MIR 20 85 -177 2355 92 0 16 chr10 92876534 92876850 -47439915 - AluY SINE Alu 0 311 1 208 306 8 97 chr10 92876850 92876903 -47439862 + MIR SINE MIR 85 141 -121 1722 160 38 7 chr10 92876942 92877235 -47439530 + AluJo SINE Alu 5 306 -6 830 225 41 0 chr10 92877283 92877452 -47439313 - MER20 DNA MER1_type -8 211 36 21 36 0 0 chr10 92877540 92877568 -47439197 + AT_rich Low_complexity Low_complexity 1 28 0 2003 160 0 3 chr10 92877916 92878228 -47438537 - AluSx SINE Alu -1 311 1 198 366 7 26 chr10 92878546 92878699 -47438066 + L2 LINE L2 2886 3035 -237 31 26 0 0 chr10 92878884 92878922 -47437843 + AT_rich Low_complexity Low_complexity 1 38 0 592 265 22 112 chr10 92878968 92879171 -47437594 + MIR SINE MIR 11 186 -76 1767 169 7 20 chr10 92879171 92879467 -47437298 + AluJb SINE Alu 1 292 -20 592 265 22 112 chr10 92879467 92879531 -47437234 + MIR SINE MIR 186 254 -8 200 250 16 47 chr10 92879562 92879626 -47437139 + L2 LINE L2 3191 3252 -61 28 48 0 0 chr10 92880187 92880229 -47436536 + AT_rich Low_complexity Low_complexity 1 42 0 275 267 50 20 chr10 92880339 92880440 -47436325 - MIR SINE MIR -123 139 36 1354 264 131 25 chr10 92880440 92880929 -47435836 + MLT1H LTR MaLR 1 541 -8 7634 101 10 14 chr10 92880959 92882832 -47433933 + L1PA7 LINE L1 4255 6154 0 3046 152 22 0 chr10 92882850 92883345 -47433420 + L1MB3 LINE L1 5594 6099 -84 2751 233 70 29 chr10 92883358 92884175 -47432590 + MER21B LTR ERV1 3 852 -11 529 118 0 0 chr10 92884185 92884270 -47432495 + L1MB3 LINE L1 6099 6183 0 483 277 38 13 chr10 92884299 92884458 -47432307 - L1ME4a LINE L1 -234 5887 5725 25 65 0 0 chr10 92884640 92884686 -47432079 + AT_rich Low_complexity Low_complexity 1 46 0 242 322 101 13 chr10 92884955 92885104 -47431661 - L2 LINE L2 -925 2389 2228 294 268 94 63 chr10 92885138 92885265 -47431500 - MER5A DNA MER1_type -40 149 19 251 297 59 0 chr10 92885319 92885420 -47431345 - L2 LINE L2 -1204 2110 2004 1284 202 30 72 chr10 92885446 92885795 -47430970 - MLT1A2 LTR MaLR 0 374 39 2237 110 0 10 chr10 92885900 92886238 -47430527 + AluSx SINE Alu 4 312 0 318 237 13 26 chr10 92887248 92887324 -47429441 + L2 LINE L2 3190 3264 -49 1845 186 0 7 chr10 92888031 92888338 -47428427 + AluJo SINE Alu 3 307 -5 1646 159 24 17 chr10 92888404 92888699 -47428066 - AluJo SINE Alu -15 297 1 252 289 105 13 chr10 92889103 92889179 -47427586 - MIR SINE MIR -100 108 26 312 295 67 19 chr10 92889708 92889813 -47426952 + MIR SINE MIR 21 130 -78 1053 194 24 0 chr10 92890271 92890477 -47426288 + L1PA16 LINE L1 5956 6166 0 2409 82 0 0 chr10 92890921 92891212 -47425553 + AluSg SINE Alu 1 291 -19 228 291 55 30 chr10 92891282 92891447 -47425318 + L1ME LINE L1 5563 5731 -390 198 0 0 0 chr10 92891809 92891831 -47424934 + (A)n Simple_repeat Simple_repeat 1 22 0 182 209 47 0 chr10 92892000 92892043 -47424722 + L2 LINE L2 3210 3254 -18 236 291 33 113 chr10 92892106 92892257 -47424508 - MIR3 SINE MIR -38 170 32 192 77 0 0 chr10 92892788 92892814 -47423951 + (GGA)n Simple_repeat Simple_repeat 1 26 0 233 330 38 87 chr10 92893133 92893503 -47423262 + L2 LINE L2 706 1057 -2257 701 289 45 0 chr10 92893785 92893986 -47422779 + MIR SINE MIR 53 262 0 209 200 24 11 chr10 92894262 92894316 -47422449 + GA-rich Low_complexity Low_complexity 2 36 0 467 350 58 18 chr10 92894316 92894710 -47422055 + L2 LINE L2 1706 2115 -1199 210 37 0 0 chr10 92894725 92894752 -47422013 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 92895226 92895248 -47421517 + AT_rich Low_complexity Low_complexity 1 22 0 268 321 45 54 chr10 92895299 92895635 -47421130 + L2 LINE L2 2657 2986 -327 197 238 0 0 chr10 92895832 92895874 -47420891 + L2 LINE L2 3217 3258 -14 2184 110 3 13 chr10 92896024 92896334 -47420431 + AluSx SINE Alu 1 307 -5 24 0 0 0 chr10 92898155 92898179 -47418586 + AT_rich Low_complexity Low_complexity 1 24 0 2376 102 0 0 chr10 92898293 92898598 -47418167 + AluSx SINE Alu 5 309 -3 1578 172 17 44 chr10 92898607 92898903 -47417862 + AluJo SINE Alu 6 293 -19 997 161 0 6 chr10 92899130 92899291 -47417474 + AluJb SINE Alu 125 284 -28 1289 128 5 10 chr10 92899609 92899812 -47416953 + AluSq SINE Alu 105 306 -7 2356 113 11 8 chr10 92899852 92900206 -47416559 - THE1A LTR MaLR 0 355 1 2001 145 0 3 chr10 92900278 92900581 -47416184 - AluSx SINE Alu 0 302 1 925 284 163 49 chr10 92900726 92901210 -47415555 - L2 LINE L2 -1 3271 2653 2213 91 0 0 chr10 92901210 92901496 -47415269 - AluSg SINE Alu -18 292 7 925 284 163 49 chr10 92901496 92901759 -47415006 - L2 LINE L2 -619 2653 2421 211 283 50 0 chr10 92901888 92901948 -47414817 - MER5A DNA MER1_type -3 186 124 2181 107 3 0 chr10 92902917 92903206 -47413559 - AluSx SINE Alu -22 290 1 205 323 248 0 chr10 92903324 92903550 -47413215 + L2 LINE L2 2242 2523 -791 1893 106 109 0 chr10 92903752 92904026 -47412739 - AluSx SINE Alu -8 304 1 255 275 0 0 chr10 92904631 92904700 -47412065 + MLT1F1 LTR MaLR 57 125 -442 2804 168 44 0 chr10 92904700 92905272 -47411493 + L1MC3 LINE L1 7189 7785 0 471 236 6 155 chr10 92905899 92906092 -47410673 + MER5B DNA MER1_type 1 175 -14 215 317 0 0 chr10 92906312 92906372 -47410393 + L2 LINE L2 3251 3310 -3 313 325 63 16 chr10 92906446 92906572 -47410193 - L2 LINE L2 -2 3270 3139 2223 130 0 32 chr10 92908680 92909027 -47407738 + MER1B DNA MER1_type 1 336 -1 1454 188 20 40 chr10 92909257 92909555 -47407210 + AluJo SINE Alu 1 292 -20 763 171 0 8 chr10 92909593 92909710 -47407055 + FLAM_A SINE Alu 11 126 -16 345 343 30 12 chr10 92910305 92910474 -47406291 - MER5A DNA MER1_type -10 179 8 1844 104 47 54 chr10 92910812 92911110 -47405655 - AluSx SINE Alu -16 296 1 1150 171 73 5 chr10 92911379 92911584 -47405181 + AluJo SINE Alu 38 256 -56 2183 129 0 6 chr10 92911822 92912133 -47404632 - AluSx SINE Alu -3 309 1 227 314 14 0 chr10 92912393 92912463 -47404302 + MIR SINE MIR 83 153 -109 222 105 0 0 chr10 92912606 92912644 -47404121 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2155 97 0 3 chr10 92912649 92912938 -47403827 - AluY SINE Alu -21 290 3 283 145 0 132 chr10 92912989 92913065 -47403700 - L3 LINE CR1 -7 1570 1505 2316 63 33 13 chr10 92913540 92913841 -47402924 - AluY SINE Alu -3 308 2 22 88 0 0 chr10 92914680 92914737 -47402028 + AT_rich Low_complexity Low_complexity 1 57 0 13024 140 52 1 chr10 92915358 92917633 -47399132 - Tigger1 DNA MER2_type -1 2417 26 2747 199 49 9 chr10 92917641 92918274 -47398491 - L1MB8 LINE L1 -22 6156 5499 505 250 59 55 chr10 92918272 92918492 -47398273 + HAL1 LINE L1 1531 1751 -756 * 234 226 65 0 chr10 92918499 92918561 -47398204 + HAL1 LINE L1 2431 2496 -11 23 33 0 0 chr10 92918561 92918591 -47398174 + AT_rich Low_complexity Low_complexity 1 30 0 353 311 50 54 chr10 92919280 92919502 -47397263 + L2 LINE L2 3077 3297 -16 277 356 68 4 chr10 92919925 92920224 -47396541 + L2 LINE L2 2728 3048 -224 564 285 170 43 chr10 92920244 92920673 -47396092 + L2 LINE L2 2758 3244 -69 329 266 168 6 chr10 92920929 92920984 -47395781 - MER46C DNA MER2_type -4 334 289 180 0 0 0 chr10 92920984 92921004 -47395761 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2215 78 21 0 chr10 92921006 92921288 -47395477 - AluY SINE Alu -23 288 1 329 266 168 6 chr10 92921288 92921402 -47395363 - MER46C DNA MER2_type -49 289 134 26 30 0 0 chr10 92921571 92921604 -47395161 + AT_rich Low_complexity Low_complexity 1 33 0 307 312 211 10 chr10 92921609 92921808 -47394957 - MIR SINE MIR -5 257 19 21 0 0 0 chr10 92922849 92922870 -47393895 + AT_rich Low_complexity Low_complexity 1 21 0 216 229 21 0 chr10 92924215 92924263 -47392502 + MIR SINE MIR 183 231 -31 1806 128 63 68 chr10 92924595 92924962 -47391803 - MLT1A1 LTR MaLR 0 365 1 185 0 0 39 chr10 92925067 92925093 -47391672 + (CTG)n Simple_repeat Simple_repeat 2 26 0 676 266 45 0 chr10 92925094 92925271 -47391494 - MIR SINE MIR -11 251 67 235 163 0 0 chr10 92925803 92925846 -47390919 - MER53 DNA DNA -146 43 1 2251 83 28 0 chr10 92926423 92926713 -47390052 + AluSx SINE Alu 1 298 -14 701 153 71 0 chr10 92927375 92927545 -47389220 - L1MA7 LINE L1 -2 6289 6108 2482 133 44 22 chr10 92927547 92928004 -47388761 - L1MA7 LINE L1 -283 6008 5542 214 245 57 0 chr10 92928800 92928853 -47387912 - L2 LINE L2 -49 3223 3168 22 35 0 0 chr10 92929325 92929354 -47387411 + AT_rich Low_complexity Low_complexity 1 29 0 246 128 0 0 chr10 92929603 92929642 -47387123 + (A)n Simple_repeat Simple_repeat 1 39 0 810 259 78 60 chr10 92929934 92930385 -47386380 + L1MC4a LINE L1 5435 5893 -1915 256 234 4 138 chr10 92930388 92930627 -47386138 + L1MC5 LINE L1 7711 7917 -44 262 94 22 8 chr10 92930664 92930720 -47386045 + L1MB8 LINE L1 6129 6184 0 497 237 66 0 chr10 92931900 92932052 -47384713 + L1ME3A LINE L1 6002 6163 -7 182 238 71 83 chr10 92933802 92933886 -47382879 + MIR SINE MIR 63 145 -117 2136 131 0 13 chr10 92934743 92935048 -47381717 + AluSx SINE Alu 1 301 -11 2090 135 10 0 chr10 92935112 92935409 -47381356 + AluSx SINE Alu 1 300 -12 399 165 0 0 chr10 92935409 92935494 -47381271 + (TA)n Simple_repeat Simple_repeat 2 86 0 558 212 181 52 chr10 92937603 92937796 -47378969 - MER20 DNA MER1_type 0 219 2 277 272 0 43 chr10 92937865 92937957 -47378808 - MIR3 SINE MIR -15 193 106 1131 241 86 38 chr10 92939333 92939777 -47376988 + MLT1C LTR MaLR 1 465 -2 613 276 122 19 chr10 92939942 92940156 -47376609 + MIR SINE MIR 24 259 -3 323 295 218 0 chr10 92940462 92940618 -47376147 - MIR SINE MIR -1 261 72 1432 212 6 35 chr10 92940771 92941087 -47375678 + AluJb SINE Alu 5 311 -1 681 250 75 71 chr10 92942250 92942558 -47374207 - MER102b DNA MER1_type 0 341 33 890 234 30 5 chr10 92942701 92942902 -47373863 + MER63A DNA MER1_type 5 210 0 198 302 31 42 chr10 92943086 92943182 -47373583 - MIR SINE MIR -98 164 70 511 110 12 24 chr10 92943277 92943359 -47373406 - MER5A DNA MER1_type 0 189 109 13427 124 22 38 chr10 92943865 92943988 -47372777 - Tigger1 DNA MER2_type 0 2418 2295 2198 103 7 7 chr10 92943988 92944288 -47372477 + AluSx SINE Alu 4 303 -9 13427 124 22 38 chr10 92944288 92944337 -47372428 - Tigger1 DNA MER2_type -123 2295 2247 2231 94 0 3 chr10 92944337 92944625 -47372140 - AluY SINE Alu -24 287 1 13427 124 22 38 chr10 92944625 92946096 -47370669 - Tigger1 DNA MER2_type -171 2247 823 2019 156 0 0 chr10 92946096 92946398 -47370367 - AluJb SINE Alu -10 302 1 13427 124 22 38 chr10 92946398 92947162 -47369603 - Tigger1 DNA MER2_type -1595 823 48 2342 80 0 0 chr10 92947605 92947905 -47368860 - AluY SINE Alu -11 300 1 182 239 0 15 chr10 92947919 92947986 -47368779 + GA-rich Low_complexity Low_complexity 3 68 0 525 227 178 106 chr10 92948454 92948647 -47368118 + L2 LINE L2 2927 3154 -159 2037 125 4 0 chr10 92948647 92948927 -47367838 - AluSx SINE Alu -20 292 12 525 227 178 106 chr10 92948927 92949054 -47367711 + L2 LINE L2 3154 3270 -43 311 287 91 35 chr10 92949613 92949756 -47367009 + MIR3 SINE MIR 37 187 -21 342 296 28 9 chr10 92949756 92949864 -47366901 - MIR3 SINE MIR -52 156 47 670 171 165 24 chr10 92951025 92951189 -47365576 - MIR SINE MIR -1 261 75 443 319 66 0 chr10 92952334 92952500 -47364265 + MER5B DNA MER1_type 1 177 -1 319 296 86 43 chr10 92953409 92953595 -47363170 + MIR3 SINE MIR 4 197 -11 339 258 62 109 chr10 92953807 92954082 -47362683 + L1ME LINE L1 5558 5819 -302 2026 130 3 7 chr10 92954090 92954383 -47362382 + AluJb SINE Alu 1 292 -20 314 123 18 0 chr10 92954496 92954553 -47362212 + GA-rich Low_complexity Low_complexity 4 61 0 597 119 60 0 chr10 92955166 92955250 -47361515 - AluJb SINE Alu -201 111 23 424 262 104 6 chr10 92955859 92956023 -47360742 + L1MC/D LINE L1 5637 5816 -1992 872 200 13 13 chr10 92956066 92956216 -47360549 + FAM SINE Alu 20 169 -16 2131 109 0 0 chr10 92956218 92956502 -47360263 + AluSg SINE Alu 4 287 -23 535 194 2 0 chr10 92956658 92956798 -47359967 + MLT1I LTR MaLR 290 407 -2 1141 270 42 54 chr10 92958148 92958555 -47358210 + MLT1I LTR MaLR 8 409 0 5650 165 35 32 chr10 92959438 92960506 -47356259 + MER11C LTR ERVK 1 1071 0 2298 100 3 3 chr10 92960594 92960893 -47355872 + AluSp SINE Alu 1 299 -14 376 247 68 26 chr10 92961017 92961150 -47355615 - MIR3 SINE MIR -3 205 63 375 227 23 11 chr10 92961152 92961240 -47355525 + MLT1K LTR MaLR 493 581 -7 214 279 45 54 chr10 92961254 92961288 -47355477 + MIR3 SINE MIR 93 126 -82 2042 143 0 10 chr10 92961288 92961588 -47355177 - AluSx SINE Alu -15 297 1 214 279 45 54 chr10 92961588 92961664 -47355101 + MIR3 SINE MIR 126 202 -6 669 266 110 81 chr10 92961922 92962128 -47354637 + L1ME4a LINE L1 5480 5679 -442 2259 94 0 10 chr10 92962128 92962426 -47354339 + AluY SINE Alu 1 295 -16 669 266 110 81 chr10 92962426 92962786 -47353979 + L1ME4a LINE L1 5679 6068 -53 2257 103 3 10 chr10 92962786 92963098 -47353667 - AluY SINE Alu -1 310 1 669 266 110 81 chr10 92963098 92963147 -47353618 + L1ME4a LINE L1 6068 6114 -7 1244 157 60 20 chr10 92963794 92964043 -47352722 - ORSL DNA AcHobo 0 275 17 371 259 50 39 chr10 92964265 92964435 -47352330 - MER5A DNA MER1_type -3 186 2 1784 161 10 13 chr10 92964479 92964777 -47351988 - AluJb SINE Alu -15 297 1 2367 74 0 0 chr10 92965880 92966165 -47350600 - AluY SINE Alu -11 300 16 1080 221 65 21 chr10 92966743 92967068 -47349697 - MER2 DNA MER2_type 0 345 7 271 259 167 19 chr10 92967087 92967195 -47349570 - L2 LINE L2 0 3313 3190 3897 175 38 23 chr10 92967467 92968263 -47348502 + L1MB8 LINE L1 5356 6163 -15 24 0 0 0 chr10 92968671 92968695 -47348070 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr10 92968909 92968937 -47347828 + AT_rich Low_complexity Low_complexity 1 28 0 634 221 48 0 chr10 92969888 92970033 -47346732 - MIR SINE MIR -1 261 110 2426 73 0 0 chr10 92970068 92970368 -47346397 - AluY SINE Alu -11 300 1 705 228 0 0 chr10 92970462 92970585 -47346180 + FLAM_A SINE Alu 1 123 -10 189 0 0 0 chr10 92971533 92971554 -47345211 + (TG)n Simple_repeat Simple_repeat 2 22 0 473 187 26 27 chr10 92971557 92971742 -47345023 + L1MC5 LINE L1 7687 7908 -53 860 229 34 34 chr10 92972635 92972840 -47343925 + MER63A DNA MER1_type 6 210 0 180 315 198 9 chr10 92973372 92973483 -47343282 - L3 LINE CR1 -4 1573 1442 469 240 140 0 chr10 92973564 92973714 -47343051 + L3 LINE CR1 1218 1388 -189 210 100 0 0 chr10 92973724 92973754 -47343011 - MIR SINE MIR 0 262 233 250 259 0 0 chr10 92973756 92973810 -47342955 - L3 LINE CR1 -606 971 918 1817 193 105 14 chr10 92974773 92975136 -47341629 - MSTD LTR MaLR 0 396 1 3254 216 37 28 chr10 92975141 92975890 -47340875 - MSTD-int LTR MaLR -6 1729 974 615 130 65 9 chr10 92975890 92976029 -47340736 - AluY SINE Alu 0 326 182 2308 84 0 0 chr10 92976037 92976324 -47340441 - AluY SINE Alu -24 287 1 398 281 30 55 chr10 92976325 92976441 -47340324 - MSTD-int LTR MaLR -726 925 813 2378 55 10 0 chr10 92976441 92976731 -47340034 - AluY SINE Alu -18 293 1 398 281 30 55 chr10 92976731 92976778 -47339987 - MSTD-int LTR MaLR -838 813 766 4888 116 34 12 chr10 92976866 92977639 -47339126 - Tigger3(Golem) DNA MER2_type -1 3028 2239 1258 198 26 0 chr10 92977632 92977864 -47338901 - Tigger3(Golem) DNA MER2_type -2791 238 1 * 3702 201 38 27 chr10 92977873 92978639 -47338126 - MSTD-int LTR MaLR -960 775 2 1957 183 103 3 chr10 92978641 92979001 -47337764 - MSTD LTR MaLR 0 396 1 384 330 110 11 chr10 92979016 92979207 -47337558 - MIR SINE MIR -14 248 39 544 227 37 7 chr10 92979315 92979459 -47337306 + MIR SINE MIR 114 262 0 273 29 0 0 chr10 92979966 92980000 -47336765 + (CA)n Simple_repeat Simple_repeat 2 35 0 1400 64 0 0 chr10 92981146 92981360 -47335405 + AluY SINE Alu 123 311 0 257 299 149 30 chr10 92981461 92981595 -47335170 - MIR3 SINE MIR -11 197 48 307 302 140 78 chr10 92984045 92984856 -47331909 + L1M2 LINE L1 528 1235 -5614 208 329 57 14 chr10 92985493 92985563 -47331202 + MIR SINE MIR 2 74 -188 238 211 158 26 chr10 92985701 92985777 -47330988 + MIR SINE MIR 158 243 -19 225 278 166 53 chr10 92986033 92986184 -47330581 - MIR3 SINE MIR -6 202 35 207 281 98 0 chr10 92986506 92986588 -47330177 + MIR SINE MIR 113 202 -60 398 100 129 0 chr10 92986589 92986659 -47330106 + LTR24 LTR ERV1 2 80 -387 996 171 6 6 chr10 92986671 92986835 -47329930 - FRAM SINE Alu -11 165 2 2103 151 56 0 chr10 92986838 92987176 -47329589 + LTR24 LTR ERV1 111 467 0 232 286 143 0 chr10 92987218 92987302 -47329463 + L2 LINE L2 3116 3211 -61 1603 88 79 9 chr10 92987345 92987560 -47329205 - MER30 DNA MER1_type 0 230 1 436 227 78 23 chr10 92988081 92988209 -47328556 - L2 LINE L2 0 3313 3179 369 196 56 19 chr10 92988263 92988370 -47328395 - L1ME3A LINE L1 0 6170 6060 31 0 0 0 chr10 92988450 92988481 -47328284 + AT_rich Low_complexity Low_complexity 1 31 0 494 349 67 45 chr10 92988601 92988888 -47327877 - L2 LINE L2 -162 3110 2831 4270 131 68 33 chr10 92988888 92989590 -47327175 - LTR8A LTR ERV1 0 727 1 494 349 67 45 chr10 92989590 92989974 -47326791 - L2 LINE L2 -441 2831 2418 196 352 0 0 chr10 92990345 92990416 -47326349 + L2 LINE L2 3201 3271 -1 213 132 0 26 chr10 92990427 92990465 -47326300 - MIR SINE MIR -60 148 112 354 156 211 33 chr10 92990613 92990682 -47326083 + MLT1L LTR MaLR 185 275 -340 6029 115 27 7 chr10 92990682 92991537 -47325228 - MER4D LTR ERV1 0 872 1 354 156 211 33 chr10 92991537 92991557 -47325208 + MLT1L LTR MaLR 275 290 -325 184 306 61 0 chr10 92992098 92992147 -47324618 - L2 LINE L2 -55 3258 3207 198 309 0 53 chr10 92992284 92992378 -47324387 - L2 LINE L2 -226 3046 2958 3558 152 42 7 chr10 92992553 92993150 -47323615 - LTR35 LTR ERV1 0 618 1 711 277 26 30 chr10 92993525 92993756 -47323009 - MIR SINE MIR -1 261 32 264 224 45 15 chr10 92993775 92993842 -47322923 + MER21B LTR ERV1 14 82 -781 619 221 19 39 chr10 92993901 92994055 -47322710 + MER21B LTR ERV1 98 248 -615 1989 184 147 49 chr10 92994085 92994155 -47322610 + MER21B LTR ERV1 329 391 -472 2696 117 58 19 chr10 92994155 92994567 -47322198 - MSTA LTR MaLR 0 428 1 1989 184 147 49 chr10 92994567 92994725 -47322040 + MER21B LTR ERV1 391 532 -331 1842 135 241 11 chr10 92994725 92995073 -47321692 + MSTA LTR MaLR 1 428 0 10115 142 22 15 chr10 92995075 92996642 -47320123 + MSTA-int LTR MaLR 3 1580 0 1203 153 192 69 chr10 92996642 92996976 -47319789 + MSTA LTR MaLR 1 375 0 1989 184 147 49 chr10 92996976 92997210 -47319555 + MER21B LTR ERV1 531 842 -21 2337 156 11 0 chr10 92997496 92997855 -47318910 + MER47A DNA MER2_type 4 366 0 2358 228 98 3 chr10 92998117 92998860 -47317905 - MER21B LTR ERV1 -1 862 2 241 247 24 59 chr10 92999268 92999353 -47317412 - LTR67 LTR ERVL -380 177 96 247 287 29 92 chr10 92999617 92999757 -47317008 + MIR SINE MIR 5 133 -129 739 237 24 29 chr10 92999757 92999964 -47316801 + MER3 DNA MER1_type 1 206 -3 247 287 29 92 chr10 92999964 92999997 -47316768 + MIR SINE MIR 133 167 -95 289 260 101 41 chr10 93000070 93000239 -47316526 - L2 LINE L2 -103 3210 3032 2548 177 64 94 chr10 93000389 93000575 -47316190 + L1MC5 LINE L1 6866 7056 -905 2180 121 3 0 chr10 93000575 93000865 -47315900 + AluSp SINE Alu 1 291 -22 2548 177 64 94 chr10 93000865 93001500 -47315265 + L1MC5 LINE L1 7056 7642 -319 2100 110 14 3 chr10 93001500 93001792 -47314973 - AluSx SINE Alu -12 300 6 2548 177 64 94 chr10 93001792 93002052 -47314713 + L1MC5 LINE L1 7642 7908 -53 454 259 59 73 chr10 93002120 93002178 -47314587 + MLT1J LTR MaLR 326 383 -128 1618 178 132 3 chr10 93002178 93002526 -47314239 + MSTD LTR MaLR 4 396 0 454 259 59 73 chr10 93002526 93002717 -47314048 + MLT1J LTR MaLR 383 509 -2 830 326 82 15 chr10 93002804 93003380 -47313385 - L2 LINE L2 -412 2902 2209 855 132 73 0 chr10 93003443 93003579 -47313186 - FRAM SINE Alu -13 163 18 542 309 27 21 chr10 93003613 93003801 -47312964 - MIR SINE MIR -70 192 4 440 258 73 0 chr10 93004077 93004201 -47312564 - MLT1G LTR MaLR -41 549 417 1656 182 69 14 chr10 93004241 93004587 -47312178 + MLT1A1 LTR MaLR 1 365 0 402 265 56 39 chr10 93004655 93004835 -47311930 - MLT1J2 LTR MaLR -188 379 203 222 37 0 0 chr10 93005319 93005346 -47311419 + (GA)n Simple_repeat Simple_repeat 1 27 0 991 230 31 50 chr10 93005404 93005665 -47311100 + MIR SINE MIR 5 260 -2 430 327 101 45 chr10 93005661 93006310 -47310455 - L2 LINE L2 0 3272 2565 * 237 122 0 0 chr10 93006427 93006468 -47310297 + L1ME1 LINE L1 5847 5887 -234 2843 151 23 6 chr10 93006706 93007229 -47309536 - L1MB8 LINE L1 -4 6174 5643 566 171 114 14 chr10 93007252 93007392 -47309373 + L1ME1 LINE L1 6009 6162 -4 349 277 54 54 chr10 93007549 93007679 -47309086 - MIR SINE MIR -76 186 57 449 186 257 16 chr10 93008275 93008458 -47308307 + LTR33A LTR ERVL 293 519 -4 2679 120 42 0 chr10 93008489 93008898 -47307867 - MSTA LTR MaLR -2 426 1 1004 232 41 0 chr10 93009281 93009501 -47307264 - MLT1J2 LTR MaLR -221 229 1 1008 241 102 25 chr10 93010768 93011170 -47305595 - MLT1J1 LTR MaLR -13 433 1 235 180 0 20 chr10 93011664 93011714 -47305051 + T-rich Low_complexity Low_complexity 6 54 0 495 303 80 28 chr10 93011933 93012257 -47304508 - L1ME3A LINE L1 -230 5940 5600 2224 109 0 3 chr10 93012275 93012568 -47304197 + AluSg SINE Alu 2 293 -17 236 289 43 19 chr10 93012931 93013048 -47303717 + MIR SINE MIR 10 130 -78 2206 134 0 0 chr10 93013050 93013349 -47303416 - AluSx SINE Alu -13 299 1 910 134 8 0 chr10 93013349 93013483 -47303282 - AluSq/x SINE Alu -177 135 1 871 260 9 18 chr10 93013593 93013816 -47302949 - MIR SINE MIR -10 252 32 285 189 236 28 chr10 93013835 93013941 -47302824 + MLT1F LTR MaLR 374 501 -41 1273 155 9 26 chr10 93013941 93014173 -47302592 - AluJo SINE Alu -1 311 84 234 186 0 0 chr10 93014174 93014217 -47302548 + MLT1F LTR MaLR 491 533 -9 1029 187 95 84 chr10 93014296 93014825 -47301940 + MER34B LTR ERV1 12 560 -5 737 77 0 0 chr10 93014845 93014949 -47301816 - AluY SINE Alu 0 311 208 403 200 174 26 chr10 93014986 93015101 -47301664 + MIR SINE MIR 27 158 -104 378 200 86 0 chr10 93015172 93015277 -47301488 + LTR37A LTR ERV1 54 167 -259 585 216 0 16 chr10 93015278 93015403 -47301362 + FLAM_A SINE Alu 8 130 -12 518 249 72 10 chr10 93015453 93015646 -47301119 + LTR37A LTR ERV1 222 426 0 386 200 89 0 chr10 93015646 93015736 -47301029 + MIR SINE MIR 160 257 -5 216 277 108 24 chr10 93017127 93017210 -47299555 + MIR SINE MIR 66 155 -107 308 293 15 30 chr10 93017214 93017347 -47299418 - MLT1J LTR MaLR -144 367 237 324 0 0 0 chr10 93017697 93017733 -47299032 + (TG)n Simple_repeat Simple_repeat 1 36 0 564 308 101 13 chr10 93017932 93018169 -47298596 - MIR SINE MIR -1 261 4 1898 205 27 46 chr10 93018245 93019034 -47297731 + L1MC4 LINE L1 7086 7808 0 336 263 140 9 chr10 93019168 93019282 -47297483 + MER91B DNA MER1_type 2 130 -60 343 255 61 0 chr10 93019296 93019394 -47297371 + MER91B DNA MER1_type 87 190 0 403 185 120 9 chr10 93019699 93019807 -47296958 - MLT1L LTR MaLR 0 615 496 294 288 29 71 chr10 93020087 93020257 -47296508 - MLT1L LTR MaLR -415 200 38 2511 165 59 40 chr10 93020374 93020968 -47295797 + L1MB2 LINE L1 5563 6167 -4 22 0 0 0 chr10 93021397 93021419 -47295346 + AT_rich Low_complexity Low_complexity 1 22 0 2464 70 0 0 chr10 93021536 93021834 -47294931 - AluY SINE Alu -12 299 2 401 235 71 125 chr10 93021948 93022117 -47294648 + L1ME4a LINE L1 5746 5923 -198 2093 148 3 0 chr10 93022117 93022422 -47294343 + AluSx SINE Alu 1 306 -6 401 235 71 125 chr10 93022422 93022475 -47294290 + L1ME4a LINE L1 5923 5977 -144 2026 93 83 0 chr10 93022475 93022753 -47294012 + AluY SINE Alu 9 309 -2 401 235 71 125 chr10 93022753 93022865 -47293900 + L1ME4a LINE L1 5977 6063 -58 2407 119 23 56 chr10 93023293 93023723 -47293042 + Tigger2a DNA MER2_type 1 416 -18 345 271 60 23 chr10 93024897 93025030 -47291735 + MIR SINE MIR 108 245 -17 2199 123 0 0 chr10 93025032 93025340 -47291425 - AluSx SINE Alu -2 310 3 353 261 119 101 chr10 93026186 93026259 -47290506 + HAL1 LINE L1 1234 1304 -1203 2142 104 10 0 chr10 93026259 93026548 -47290217 - AluSg SINE Alu -18 292 1 353 261 119 101 chr10 93026548 93026792 -47289973 + HAL1 LINE L1 1304 1557 -950 3882 221 58 37 chr10 93027347 93027712 -47289053 - L1MC4a LINE L1 0 7808 7452 1859 176 7 3 chr10 93027712 93028018 -47288747 - AluJo SINE Alu -4 308 2 3882 221 58 37 chr10 93028018 93028399 -47288366 - L1MC4a LINE L1 -356 7452 7080 2045 150 75 52 chr10 93028399 93028839 -47287926 - LTR47A LTR ERVL -2 450 1 3882 221 58 37 chr10 93028839 93029374 -47287391 - L1MC4a LINE L1 -728 7080 6596 1722 175 3 10 chr10 93029374 93029671 -47287094 + AluJo SINE Alu 2 296 -16 3882 221 58 37 chr10 93029671 93029724 -47287041 - L1MC4a LINE L1 -1212 6596 6546 293 304 62 12 chr10 93029999 93030160 -47286605 - MER117 DNA MER1_type -16 181 13 187 302 115 31 chr10 93031057 93031153 -47285612 - L2 LINE L2 -30 3283 3180 328 164 74 25 chr10 93031164 93031286 -47285479 + L1ME4a LINE L1 5992 6119 -2 188 256 146 37 chr10 93031855 93031937 -47284828 - MIR SINE MIR 0 262 172 559 221 39 100 chr10 93031947 93032178 -47284587 - MER46C DNA MER2_type 0 338 122 4776 278 20 14 chr10 93032502 93034217 -47282548 - Tigger4(Zombi) DNA MER2_type -601 2130 405 258 245 14 84 chr10 93034291 93034434 -47282331 - MER46C DNA MER2_type -205 133 1 242 145 145 48 chr10 93034446 93034508 -47282257 - MIR SINE MIR -120 142 75 5171 129 19 31 chr10 93035303 93036208 -47280557 + MER4D LTR ERV1 10 903 0 633 172 31 8 chr10 93036246 93036374 -47280391 + L1PA15 LINE L1 6035 6165 0 40 21 0 0 chr10 93036413 93036460 -47280305 + AT_rich Low_complexity Low_complexity 1 47 0 2155 123 31 18 chr10 93036460 93036850 -47279915 - Tigger3b DNA MER2_type -506 725 331 1915 169 0 0 chr10 93037064 93037371 -47279394 - AluJb SINE Alu -5 307 1 314 260 30 30 chr10 93037532 93037632 -47279133 - HAL1 LINE L1 -164 2343 2244 214 313 81 20 chr10 93037850 93037949 -47278816 + L2 LINE L2 2782 2886 -428 258 246 213 16 chr10 93038125 93038247 -47278518 - L2 LINE L2 -10 3303 3158 262 269 75 6 chr10 93038265 93038404 -47278361 - MIR SINE MIR -25 237 8 705 182 139 6 chr10 93038474 93038639 -47278126 - MER105 DNA DNA -16 188 2 275 301 60 36 chr10 93038890 93038973 -47277792 + MIR SINE MIR 20 104 -158 256 294 33 0 chr10 93038975 93039067 -47277698 - MIR SINE MIR -26 236 142 * 476 287 88 11 chr10 93039013 93039194 -47277571 + MIR SINE MIR 43 237 -25 490 313 97 44 chr10 93039410 93039771 -47276994 + L2 LINE L2 2530 2909 -405 * 519 291 160 52 chr10 93039749 93040155 -47276610 - L2 LINE L2 -1 3312 2863 923 242 162 58 chr10 93040261 93040959 -47275806 - L1MC4 LINE L1 -32 8010 7140 602 260 75 25 chr10 93041779 93041979 -47274786 + MIR SINE MIR 51 260 -2 206 333 111 20 chr10 93042745 93042844 -47273921 - L2 LINE L2 -63 3209 3102 1107 223 76 43 chr10 93043211 93043633 -47273132 - LTR55 LTR ERV -15 533 98 2288 89 7 0 chr10 93043642 93043944 -47272821 - AluSc SINE Alu -5 304 1 358 227 31 10 chr10 93043987 93044084 -47272681 - LTR55 LTR ERV -449 99 1 2245 89 7 10 chr10 93044448 93044750 -47272015 - AluSg1 SINE Alu -8 301 1 1154 244 62 9 chr10 93045383 93045707 -47271058 + MER58B DNA MER1_type 1 341 0 2008 215 85 130 chr10 93045709 93048108 -47268657 - L1ME1 LINE L1 -294 5872 3590 2431 71 3 0 chr10 93048108 93048404 -47268361 - AluSp SINE Alu -16 297 1 2008 215 85 130 chr10 93048404 93048560 -47268205 - L1ME1 LINE L1 -2576 3590 3428 206 200 33 0 chr10 93049532 93049592 -47267173 + (TTA)n Simple_repeat Simple_repeat 1 62 0 1924 125 3 54 chr10 93050109 93050422 -47266343 - AluSx SINE Alu -15 297 1 281 213 28 11 chr10 93051733 93051823 -47264942 - L1P5 LINE L1 -392 5764 5677 1643 194 3 13 chr10 93052131 93052446 -47264319 - AluJo SINE Alu 0 312 1 198 287 208 30 chr10 93052462 93052563 -47264202 - L2 LINE L2 0 3272 3154 2119 124 7 3 chr10 93052971 93053269 -47263496 + AluSx SINE Alu 3 301 -11 290 180 124 157 chr10 93053371 93053588 -47263177 + L1ME4a LINE L1 5563 5772 -349 241 257 69 10 chr10 93053672 93053773 -47262992 + L1ME4a LINE L1 5968 6074 -47 28 0 0 0 chr10 93054062 93054090 -47262675 + AT_rich Low_complexity Low_complexity 1 28 0 2252 80 11 0 chr10 93054090 93054377 -47262388 + AluSc SINE Alu 1 290 -19 497 213 37 142 chr10 93055403 93055599 -47261166 + MER112 DNA MER1_type 2 167 -93 1938 149 0 0 chr10 93055599 93055914 -47260851 + AluJb SINE Alu 1 315 0 497 213 37 142 chr10 93055914 93055982 -47260783 + MER112 DNA MER1_type 167 241 -19 1676 149 64 20 chr10 93058132 93058427 -47258338 + AluJo SINE Alu 1 308 -4 1267 276 162 19 chr10 93059715 93060401 -47256364 - L1MC4 LINE L1 0 8042 7259 1987 119 3 14 chr10 93060587 93060897 -47255868 - AluSg SINE Alu 0 307 1 1773 180 10 3 chr10 93061285 93061585 -47255180 + AluJo SINE Alu 6 307 -5 1630 200 20 7 chr10 93061803 93062098 -47254667 - AluJo SINE Alu -13 299 1 2390 87 0 0 chr10 93062279 93062588 -47254177 + AluY SINE Alu 2 310 -1 289 290 87 14 chr10 93063466 93063604 -47253161 + MIR SINE MIR 112 259 -3 1979 132 0 10 chr10 93064135 93064438 -47252327 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 93064483 93064504 -47252261 + AT_rich Low_complexity Low_complexity 1 21 0 1672 147 7 53 chr10 93064504 93064804 -47251961 - AluSx SINE Alu -24 288 3 182 237 0 0 chr10 93065360 93065398 -47251367 - L3 LINE CR1 -11 1566 1529 27 29 0 0 chr10 93065475 93065509 -47251256 + AT_rich Low_complexity Low_complexity 1 34 0 550 244 8 0 chr10 93065510 93065629 -47251136 - FLAM_C SINE Alu -12 121 2 1500 163 14 37 chr10 93066710 93067005 -47249760 - AluJo SINE Alu -24 288 1 937 183 0 7 chr10 93067152 93067305 -47249460 - AluJb SINE Alu -19 293 142 22 0 0 0 chr10 93068013 93068035 -47248730 + AT_rich Low_complexity Low_complexity 1 22 0 442 226 323 5 chr10 93068436 93068542 -47248223 - MIR SINE MIR -13 249 178 1886 125 29 26 chr10 93068542 93068853 -47247912 - AluSx SINE Alu 0 312 1 442 226 323 5 chr10 93068853 93068932 -47247833 - MIR SINE MIR -84 178 5 402 21 0 0 chr10 93068948 93068995 -47247770 + (TG)n Simple_repeat Simple_repeat 2 48 0 25 75 0 0 chr10 93070285 93070338 -47246427 + AT_rich Low_complexity Low_complexity 1 53 0 220 373 0 13 chr10 93070348 93070423 -47246342 - L2 LINE L2 -11 3261 3188 246 381 85 14 chr10 93070751 93071032 -47245733 - L2 LINE L2 -452 2862 2562 1700 164 14 10 chr10 93072170 93072463 -47244302 - AluJo SINE Alu -16 296 3 21 0 0 0 chr10 93073491 93073512 -47243253 + AT_rich Low_complexity Low_complexity 1 21 0 2059 128 0 3 chr10 93074170 93074460 -47242305 + AluSq SINE Alu 1 289 -24 300 350 29 0 chr10 93075008 93075111 -47241654 + MER5A DNA MER1_type 83 188 -1 184 318 32 0 chr10 93075390 93075453 -47241312 - L2 LINE L2 -72 3200 3136 2297 83 0 7 chr10 93075578 93075880 -47240885 - AluSc SINE Alu -9 300 1 271 248 143 9 chr10 93076797 93076902 -47239863 - MIR SINE MIR -71 191 73 21 57 0 0 chr10 93079602 93079637 -47237128 + AT_rich Low_complexity Low_complexity 1 35 0 453 267 104 2 chr10 93080054 93080432 -47236333 - L1ME3A LINE L1 -298 5872 5296 578 256 45 27 chr10 93080478 93080813 -47235952 - MER21B LTR ERV1 -374 489 98 1042 146 13 0 chr10 93080851 93081009 -47235756 - FRAM SINE Alu -13 163 4 3547 128 8 6 chr10 93081087 93081611 -47235154 - MER1A DNA MER1_type -1 526 2 351 198 80 160 chr10 93081695 93081835 -47234930 - MIR SINE MIR -3 259 144 3684 179 35 41 chr10 93081835 93082568 -47234197 + MER44D DNA MER2_type 1 601 -4 351 198 80 160 chr10 93082568 93082664 -47234101 - MIR SINE MIR -118 144 42 2093 84 13 10 chr10 93082889 93083188 -47233577 - AluY SINE Alu -11 300 1 24 0 0 0 chr10 93084626 93084650 -47232115 + AT_rich Low_complexity Low_complexity 1 24 0 235 125 75 0 chr10 93084681 93084721 -47232044 + MLT1F1 LTR MaLR 83 125 -442 1211 192 102 15 chr10 93084721 93085158 -47231607 + L1MD3 LINE L1 7404 7981 -14 1781 92 0 0 chr10 93085824 93086052 -47230713 + AluSg SINE Alu 1 228 -82 540 87 0 68 chr10 93086162 93086265 -47230500 - AluSc SINE Alu -3 306 211 3774 142 63 31 chr10 93086564 93087325 -47229440 - LTR1 LTR ERV1 0 785 1 6944 28 0 0 chr10 93087662 93088477 -47228288 + L1PA3 LINE L1 5336 6150 -5 2305 92 0 0 chr10 93088597 93088892 -47227873 - AluSq SINE Alu -18 295 1 267 236 0 42 chr10 93088982 93089054 -47227711 - MIR3 SINE MIR -130 78 10 2186 147 88 72 chr10 93089951 93090463 -47226302 - L1MB7 LINE L1 -19 6165 5646 22 0 0 0 chr10 93091392 93091414 -47225351 + AT_rich Low_complexity Low_complexity 1 22 0 395 325 41 0 chr10 93091712 93091835 -47224930 - L2 LINE L2 0 3313 3186 271 225 56 34 chr10 93092539 93092628 -47224137 + MIR SINE MIR 69 159 -103 2132 98 10 7 chr10 93094204 93094500 -47222265 - AluSc SINE Alu -12 297 1 22 0 0 0 chr10 93094555 93094577 -47222188 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 93094928 93094952 -47221813 + AT_rich Low_complexity Low_complexity 1 24 0 548 223 17 13 chr10 93095947 93096176 -47220589 + CT-rich Low_complexity Low_complexity 1 230 0 1605 196 0 14 chr10 93096176 93096472 -47220293 - AluJo SINE Alu -14 298 7 395 181 80 5 chr10 93096807 93096901 -47219864 - L1MD3 LINE L1 -6 7989 6233 1464 269 133 44 chr10 93097199 93097624 -47219141 - L1ME3 LINE L1 -83 6079 5693 270 0 0 0 chr10 93097624 93097654 -47219111 + (TA)n Simple_repeat Simple_repeat 1 30 0 1464 269 133 44 chr10 93097654 93098374 -47218391 - L1ME3 LINE L1 -469 5693 4845 1480 228 129 19 chr10 93098375 93098964 -47217801 - L1M4 LINE L1 -1155 4991 4338 261 312 176 14 chr10 93100154 93100375 -47216390 + MIR SINE MIR 3 259 -3 287 307 21 54 chr10 93100713 93100861 -47215904 + MIR SINE MIR 74 216 -46 227 324 97 32 chr10 93101744 93101929 -47214836 - L2 LINE L2 -9 3304 3108 644 202 0 25 chr10 93102075 93102194 -47214571 - FLAM_A SINE Alu -17 116 1 686 255 102 56 chr10 93102541 93102887 -47213878 - MLT1H1 LTR MaLR -187 355 3 278 282 60 31 chr10 93102897 93103012 -47213753 - MER5A DNA MER1_type -54 135 7 2041 130 10 0 chr10 93103583 93103876 -47212889 + AluSx SINE Alu 1 296 -16 210 150 0 50 chr10 93104393 93104453 -47212312 + (TTA)n Simple_repeat Simple_repeat 1 57 0 263 26 51 0 chr10 93104453 93104492 -47212273 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 7579 28 7 0 chr10 93104492 93105805 -47210960 - L1PA3 LINE L1 -13 6142 4825 4157 26 12 0 chr10 93105805 93106312 -47210453 + L1PA3 LINE L1 4323 4835 -1311 * 4359 38 0 0 chr10 93106309 93106841 -47209924 - L1PA3 LINE L1 -4220 1926 1395 2378 88 0 0 chr10 93106838 93107166 -47209599 + L1PA3 LINE L1 1063 1390 -4756 * 30 27 0 0 chr10 93107430 93107467 -47209298 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr10 93107553 93107581 -47209184 + AT_rich Low_complexity Low_complexity 1 28 0 1192 83 18 0 chr10 93107768 93107936 -47208829 - L1PA7 LINE L1 0 6154 5984 1031 203 9 22 chr10 93108550 93108772 -47207993 - MER20 DNA MER1_type 0 219 1 1288 62 96 0 chr10 93109848 93109990 -47206775 + MER107 DNA MER1_type 4 168 -29 285 29 0 0 chr10 93109990 93110024 -47206741 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1288 62 96 0 chr10 93110024 93110058 -47206707 + MER107 DNA MER1_type 168 197 0 458 244 16 16 chr10 93110561 93110684 -47206081 - MER119 DNA MER1_type 0 583 461 576 243 216 6 chr10 93110695 93110876 -47205889 - MER119 DNA MER1_type -359 224 6 205 200 0 0 chr10 93111188 93111228 -47205537 + T-rich Low_complexity Low_complexity 1 40 0 628 312 131 46 chr10 93111380 93111953 -47204812 + L2 LINE L2 2631 3281 -32 2175 226 134 19 chr10 93112005 93112589 -47204176 + MER76 LTR ERV 38 688 0 30 27 0 0 chr10 93113951 93113988 -47202777 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 93114381 93114402 -47202363 + AT_rich Low_complexity Low_complexity 1 21 0 19343 175 33 21 chr10 93115131 93122807 -47193958 - L1MA1 LINE L1 -7 7714 12 261 208 170 47 chr10 93122930 93123036 -47193729 - MIR3 SINE MIR -7 201 83 1033 254 40 5 chr10 93123366 93123590 -47193175 - MER82 DNA MER2_type -1 652 421 824 284 89 35 chr10 93123741 93123823 -47192942 + L1ME LINE L1 1037 1113 -5488 2155 131 0 0 chr10 93123823 93124120 -47192645 - AluSq SINE Alu -16 297 1 824 284 89 35 chr10 93124120 93124775 -47191990 + L1ME LINE L1 1113 1736 -4865 1062 16 8 0 chr10 93124775 93124903 -47191862 - L1PA4 LINE L1 -3 6152 6024 824 284 89 35 chr10 93124903 93124939 -47191826 + L1ME LINE L1 1736 1769 -4832 601 227 52 16 chr10 93124934 93125163 -47191602 + L1ME1 LINE L1 5202 5437 -733 * 471 227 157 10 chr10 93125167 93125365 -47191400 + L1ME1 LINE L1 5937 6163 -3 4418 88 32 3 chr10 93125708 93126324 -47190441 - MER51A LTR ERV1 0 634 1 3028 78 10 0 chr10 93127864 93128274 -47188491 - L1P5 LINE L1 -427 5724 5311 2133 121 0 75 chr10 93128327 93128391 -47188374 - L1PB1 LINE L1 -8 6143 6076 2893 0 0 0 chr10 93128391 93128699 -47188066 - AluYa5 SINE Alu 0 311 4 2133 121 0 75 chr10 93128699 93129022 -47187743 - L1PB1 LINE L1 -75 6076 5785 239 216 18 36 chr10 93129025 93129136 -47187629 + (TTATA)n Simple_repeat Simple_repeat 2 110 0 309 95 95 6 chr10 93129138 93129445 -47187320 + (TA)n Simple_repeat Simple_repeat 1 334 0 6394 123 63 12 chr10 93129445 93131284 -47185481 - L1PBa LINE L1 -4776 2087 4 293 250 0 0 chr10 93132765 93132825 -47183940 + MER58 DNA MER1_type 183 242 -2178 2328 161 133 26 chr10 93132827 93133323 -47183442 - MER44D DNA MER2_type 0 605 2 995 197 24 14 chr10 93133790 93133998 -47182767 + MER2 DNA MER2_type 1 210 -135 478 278 59 35 chr10 93134374 93134543 -47182222 - MER5B DNA MER1_type 0 178 6 281 305 62 88 chr10 93135185 93135457 -47181308 + MLT1L LTR MaLR 220 484 -131 330 65 0 0 chr10 93136228 93136274 -47180491 + MADE1 DNA Mariner 1 46 -34 2533 150 14 18 chr10 93136564 93136998 -47179767 - MSTB1 LTR MaLR 0 432 1 414 208 10 21 chr10 93137129 93137225 -47179540 - L2 LINE L2 -9 3263 3169 1894 129 34 34 chr10 93137290 93137584 -47179181 - AluSx SINE Alu -18 294 1 374 123 15 15 chr10 93137609 93137674 -47179091 - MSTB1 LTR MaLR 0 432 368 216 342 57 25 chr10 93137770 93137928 -47178837 + L2 LINE L2 2855 3017 -255 4430 74 48 0 chr10 93137985 93138567 -47178198 + LTR66 LTR ERVL 1 610 0 468 136 12 0 chr10 93139192 93139273 -47177492 + MER53 DNA DNA 105 186 -3 184 327 0 0 chr10 93139591 93139643 -47177122 + MIR3 SINE MIR 151 202 -6 230 274 16 16 chr10 93139802 93139864 -47176901 - L2 LINE L2 -1 3271 3210 362 330 45 26 chr10 93140694 93140961 -47175804 + L1M3c LINE L1 5 276 -5865 2481 206 44 5 chr10 93141466 93142074 -47174691 + L1M3c LINE L1 958 1589 -4552 268 233 0 41 chr10 93142077 93142120 -47174645 + (CATATA)n Simple_repeat Simple_repeat 3 46 -26 2477 67 0 0 chr10 93142120 93142420 -47174345 + AluY SINE Alu 1 300 -11 268 233 0 41 chr10 93142420 93142426 -47174339 + (CATATA)n Simple_repeat Simple_repeat 46 51 -21 14786 141 11 14 chr10 93142426 93143267 -47173498 - Tigger1 DNA MER2_type 0 2418 1576 1858 164 0 0 chr10 93143267 93143553 -47173212 - AluJb SINE Alu -26 286 1 14786 141 11 14 chr10 93143553 93145137 -47171628 - Tigger1 DNA MER2_type -842 1576 1 268 233 0 41 chr10 93145137 93145159 -47171606 + (CATATA)n Simple_repeat Simple_repeat 51 72 0 2755 147 12 25 chr10 93145179 93145696 -47171069 + L1MA9 LINE L1 5803 6312 0 54 49 0 0 chr10 93145696 93145778 -47170987 + AT_rich Low_complexity Low_complexity 1 82 0 372 314 34 11 chr10 93145882 93146123 -47170642 - L1ME4a LINE L1 -213 5908 5689 731 226 71 19 chr10 93148050 93148262 -47168503 - MER90 LTR ERV1 -2 573 351 1475 188 17 7 chr10 93148786 93149073 -47167692 + AluJo SINE Alu 1 290 -22 360 337 94 20 chr10 93149948 93150150 -47166615 + MIR SINE MIR 40 256 -6 335 351 0 0 chr10 93150744 93150858 -47165907 - MER81 DNA DNA 0 114 1 270 331 49 28 chr10 93151202 93151344 -47165421 + MER5A DNA MER1_type 21 165 -24 656 24 12 0 chr10 93151446 93151528 -47165237 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 368 256 56 22 chr10 93151633 93151723 -47165042 + L2 LINE L2 3142 3234 -38 26 0 0 0 chr10 93152743 93152769 -47163996 + AT_rich Low_complexity Low_complexity 1 26 0 5796 134 49 13 chr10 93152789 93154194 -47162571 - L1MA8 LINE L1 -12 6279 4829 3909 134 44 13 chr10 93154416 93155049 -47161716 + MER39B LTR ERV1 1 653 0 1309 167 27 116 chr10 93155074 93155445 -47161320 - LTR49 LTR ERV1 -256 339 2 1550 149 15 22 chr10 93156226 93156495 -47160270 - AluJo SINE Alu -45 267 1 290 252 96 43 chr10 93156619 93156734 -47160031 + L2 LINE L2 2950 3070 -202 596 248 80 48 chr10 93156799 93157029 -47159736 - MIR SINE MIR -3 259 18 225 261 0 72 chr10 93157123 93157192 -47159573 + L2 LINE L2 3191 3254 -18 2009 280 120 26 chr10 93157289 93157578 -47159187 + L2 LINE L2 1900 2160 -1153 2266 89 0 0 chr10 93157578 93157908 -47158857 + AluY SINE Alu 1 330 0 2009 280 120 26 chr10 93157908 93158699 -47158066 + L2 LINE L2 2160 2875 -438 2586 120 28 14 chr10 93158699 93159058 -47157707 - THE1B LTR MaLR 0 364 1 12243 87 23 1 chr10 93159058 93160603 -47156162 - THE1B-int LTR MaLR 0 1580 1 2629 112 28 11 chr10 93160603 93160961 -47155804 - THE1B LTR MaLR 0 364 1 2009 280 120 26 chr10 93160961 93161017 -47155748 + L2 LINE L2 2874 3135 -178 216 179 0 0 chr10 93161079 93161118 -47155647 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 1882 151 3 28 chr10 93161227 93161544 -47155221 + AluJb SINE Alu 1 309 -3 1838 141 7 0 chr10 93161553 93161823 -47154942 + AluSx SINE Alu 3 274 -38 279 0 0 0 chr10 93161833 93161864 -47154901 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 203 299 45 0 chr10 93162553 93162620 -47154145 + L3 LINE CR1 600 669 -908 2080 124 7 0 chr10 93162757 93163048 -47153717 - AluSx SINE Alu -17 295 3 216 218 13 13 chr10 93163284 93163408 -47153357 + (TTAAA)n Simple_repeat Simple_repeat 1 124 0 535 267 0 8 chr10 93163750 93163870 -47152895 + MER92B LTR ERV1 2 120 -516 453 169 0 0 chr10 93163977 93164048 -47152717 + MER92C LTR ERV1 484 554 0 308 300 69 15 chr10 93164099 93164229 -47152536 - L2 LINE L2 -25 3247 3111 39 84 0 0 chr10 93164946 93165041 -47151724 + AT_rich Low_complexity Low_complexity 1 95 0 187 163 23 23 chr10 93165109 93165152 -47151613 - MIR SINE MIR -91 171 129 397 313 30 15 chr10 93167287 93167421 -47149344 - L2 LINE L2 -1 3271 3136 443 345 76 22 chr10 93167843 93168010 -47148755 - L2 LINE L2 -427 2887 2730 585 105 0 0 chr10 93168010 93168096 -47148669 + (TA)n Simple_repeat Simple_repeat 2 87 0 443 345 76 22 chr10 93168096 93168244 -47148521 - L2 LINE L2 -584 2730 2555 1121 322 70 20 chr10 93168249 93168706 -47148059 - MLT1J LTR MaLR -2 509 30 238 356 73 26 chr10 93168727 93168918 -47147847 - L2 LINE L2 -759 2555 2356 555 282 95 32 chr10 93169035 93169287 -47147478 - L1MC4a LINE L1 -161 5960 5693 445 321 162 3 chr10 93169295 93169616 -47147149 - L1MC4a LINE L1 -2174 5634 5263 346 269 67 39 chr10 93169782 93169990 -47146775 - L1ME4a LINE L1 -180 5941 5728 440 255 101 7 chr10 93170497 93170646 -47146119 + ERVL-E LTR ERVL 5594 5756 -8 723 245 114 23 chr10 93170647 93171154 -47145611 + MLT2E LTR ERVL 2 588 -40 254 240 160 0 chr10 93171169 93171244 -47145521 + L2 LINE L2 3226 3312 -1 970 254 77 37 chr10 93172380 93172923 -47143842 - HAL1 LINE L1 -32 2475 1911 935 189 74 49 chr10 93172935 93173179 -47143586 + ORSL DNA AcHobo 25 274 -1 708 254 103 26 chr10 93173196 93173468 -47143297 - HAL1 LINE L1 -607 1900 1608 3060 148 70 0 chr10 93173468 93173982 -47142783 - MER34B LTR ERV1 0 565 16 327 191 0 16 chr10 93173985 93174048 -47142717 - HAL1 LINE L1 -899 1608 1547 722 275 174 21 chr10 93174190 93174656 -47142109 - HAL1 LINE L1 -1946 561 25 1666 154 42 0 chr10 93174702 93174988 -47141777 - AluSg SINE Alu -12 298 1 2075 145 7 3 chr10 93175405 93175708 -47141057 + AluSx SINE Alu 5 308 -4 25 31 0 0 chr10 93175735 93175767 -47140998 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr10 93175909 93175930 -47140835 + AT_rich Low_complexity Low_complexity 1 21 0 499 250 0 51 chr10 93175930 93176086 -47140679 - MLT1K LTR MaLR -4 584 437 21 0 0 0 chr10 93176279 93176300 -47140465 + AT_rich Low_complexity Low_complexity 1 21 0 733 283 91 72 chr10 93176395 93176925 -47139840 + LTR67 LTR ERVL 1 540 -17 639 227 170 18 chr10 93177170 93177399 -47139366 + L2 LINE L2 2560 2823 -491 628 143 42 17 chr10 93180372 93180491 -47136274 - Charlie1 DNA MER1_type -2 2759 2638 * 1797 165 115 0 chr10 93180490 93180854 -47135911 - Charlie1 DNA MER1_type -1746 1015 610 1774 264 171 5 chr10 93180962 93181733 -47135032 - L1ME2 LINE L1 -26 6138 5237 482 311 40 0 chr10 93181760 93181911 -47134854 + L2 LINE L2 2820 2976 -338 316 304 88 15 chr10 93182007 93182211 -47134554 - L1MC5 LINE L1 -204 7757 7539 6861 174 34 34 chr10 93182281 93182750 -47134015 - L1PB4 LINE L1 0 6471 6003 2305 76 7 3 chr10 93182750 93183040 -47133725 - AluSp SINE Alu -20 293 3 6861 174 34 34 chr10 93183040 93184203 -47132562 - L1PB4 LINE L1 -468 6003 4844 1903 176 0 0 chr10 93184203 93184509 -47132256 - AluJo SINE Alu -4 308 3 6861 174 34 34 chr10 93184509 93185257 -47131508 - L1PB4 LINE L1 -1627 4844 4097 779 136 0 0 chr10 93185252 93185362 -47131403 - L1PB4 LINE L1 -6346 115 6 * 213 324 44 0 chr10 93185371 93185439 -47131326 - MIR SINE MIR -55 153 83 225 94 0 0 chr10 93185873 93185905 -47130860 + (CA)n Simple_repeat Simple_repeat 1 32 0 437 109 0 0 chr10 93186101 93186165 -47130600 + MER53 DNA DNA 2 65 -124 331 294 0 29 chr10 93187025 93187127 -47129638 + GA-rich Low_complexity Low_complexity 6 104 0 440 211 32 21 chr10 93187720 93187815 -47128950 + MER103 DNA DNA 64 159 -7 1310 202 44 0 chr10 93188116 93188388 -47128377 + Charlie4a DNA MER1_type 17 300 -208 695 225 0 36 chr10 93188389 93188527 -47128238 - FLAM_A SINE Alu 0 133 1 184 289 22 0 chr10 93188561 93188606 -47128159 + L2 LINE L2 3258 3303 -10 1805 192 0 6 chr10 93188797 93189109 -47127656 + AluJb SINE Alu 1 310 -2 2336 103 0 3 chr10 93189404 93189714 -47127051 + AluSc SINE Alu 1 309 0 1029 229 144 50 chr10 93189928 93190330 -47126435 + MLT1C LTR MaLR 34 505 0 252 185 0 0 chr10 93190720 93190774 -47125991 + (TG)n Simple_repeat Simple_repeat 2 55 0 1661 69 15 0 chr10 93191934 93192138 -47124627 + L1PA7 LINE L1 5948 6154 0 337 356 82 7 chr10 93192916 93193062 -47123703 + MIR SINE MIR 1 157 -105 232 202 39 77 chr10 93193233 93193337 -47123428 + MIR SINE MIR 163 262 0 1777 159 80 14 chr10 93193908 93194260 -47122505 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr10 93195078 93195111 -47121654 + AT_rich Low_complexity Low_complexity 1 33 0 206 214 34 34 chr10 93195610 93195699 -47121066 + (TA)n Simple_repeat Simple_repeat 1 89 0 1217 176 0 38 chr10 93195724 93195962 -47120803 - AluJo SINE Alu 0 312 84 376 316 124 15 chr10 93198489 93198755 -47118010 - L3b LINE CR1 -184 1399 1105 4205 227 74 26 chr10 93199122 93200920 -47115845 + L1ME2 LINE L1 3964 5851 -313 1542 175 118 0 chr10 93200968 93201299 -47115466 + MER63 DNA MER1_type 675 1044 -18 885 229 66 46 chr10 93201301 93201603 -47115162 + L1ME2 LINE L1 5848 6155 -9 471 18 0 0 chr10 93201668 93201724 -47115041 + (CA)n Simple_repeat Simple_repeat 2 57 0 438 218 0 0 chr10 93201923 93202001 -47114764 - MER58C DNA MER1_type -22 193 116 419 225 0 8 chr10 93201999 93202128 -47114637 + CT-rich Low_complexity Low_complexity 3 130 0 * 263 91 0 23 chr10 93202243 93202287 -47114478 + (TCC)n Simple_repeat Simple_repeat 3 45 0 590 183 29 66 chr10 93202290 93202427 -47114338 - MER58C DNA MER1_type -83 132 1 5800 101 5 3 chr10 93203323 93204255 -47112510 - L1PB2 LINE L1 0 6151 5218 429 165 0 12 chr10 93204359 93204444 -47112321 - L1PB2 LINE L1 -908 5238 5155 330 311 87 6 chr10 93204607 93204768 -47111997 + MIR SINE MIR 89 262 0 264 291 33 46 chr10 93205063 93205214 -47111551 + L2 LINE L2 3165 3313 0 189 325 40 87 chr10 93205973 93206099 -47110666 + MIR SINE MIR 33 152 -56 1000 323 47 43 chr10 93206549 93207338 -47109427 - L2 LINE L2 -25 3288 2412 204 67 0 0 chr10 93207588 93207618 -47109147 + (T)n Simple_repeat Simple_repeat 1 30 0 1516 139 104 51 chr10 93207879 93208253 -47108512 - L1MA3 LINE L1 -1 6304 5911 333 281 37 18 chr10 93208515 93208679 -47108086 - L1ME4a LINE L1 0 6121 5955 383 293 23 15 chr10 93208716 93208849 -47107916 + L2 LINE L2 3180 3313 0 319 175 0 0 chr10 93209247 93209304 -47107461 + Tigger5 DNA MER2_type 1 57 -2266 1388 113 35 4 chr10 93209333 93209562 -47107203 + Tigger5 DNA MER2_type 2088 2323 0 254 143 79 0 chr10 93209852 93209915 -47106850 + MLT1K LTR MaLR 521 588 0 624 298 29 29 chr10 93210646 93210891 -47105874 + MIR SINE MIR 15 259 -3 289 252 2 0 chr10 93210997 93211072 -47105693 + MER58C DNA MER1_type 21 96 -119 246 301 55 49 chr10 93211072 93211255 -47105510 + MER92C LTR ERV1 1 184 -370 344 153 0 0 chr10 93211337 93211396 -47105369 + MER92C LTR ERV1 494 552 -2 396 218 20 10 chr10 93211414 93211515 -47105250 + MER58C DNA MER1_type 112 213 -2 285 317 89 16 chr10 93211822 93211945 -47104820 - MIR SINE MIR -111 151 20 210 279 225 16 chr10 93211962 93212091 -47104674 + L3 LINE CR1 1247 1402 -175 180 185 0 0 chr10 93212280 93212307 -47104458 + MER5B DNA MER1_type 22 48 -130 486 293 30 18 chr10 93213410 93213574 -47103191 - MIR SINE MIR -13 249 84 255 169 0 68 chr10 93213665 93213724 -47103041 - HERV16 LTR ERVL -2246 2750 2696 2270 102 3 3 chr10 93213734 93214037 -47102728 + AluSc SINE Alu 1 303 -6 3850 91 18 0 chr10 93214064 93214624 -47102141 + LTR43 LTR ERV1 1 570 -32 2018 138 55 0 chr10 93214636 93214927 -47101838 - AluSx SINE Alu -4 308 2 2109 118 13 47 chr10 93214927 93215309 -47101456 - THE1C LTR MaLR -6 369 1 260 79 0 0 chr10 93215309 93215346 -47101419 + LTR43 LTR ERV1 566 602 0 985 341 58 5 chr10 93215373 93215997 -47100768 - HERV16 LTR ERVL -2851 2634 1978 384 356 27 11 chr10 93216301 93216489 -47100276 - HERV16 LTR ERVL -4082 1682 1492 257 312 32 0 chr10 93216583 93216740 -47100025 - L1MEc LINE L1 -4807 1756 1595 318 336 121 0 chr10 93216756 93216905 -47099860 - L1MEc LINE L1 -5073 1311 1145 254 193 96 0 chr10 93217039 93217122 -47099643 + L1ME3A LINE L1 5177 5267 -879 390 196 77 2 chr10 93217198 93217370 -47099395 + L1ME3A LINE L1 5294 5463 -693 670 171 8 16 chr10 93217414 93217543 -47099222 + FLAM_C SINE Alu 1 128 -5 203 316 18 0 chr10 93217638 93217695 -47099070 + L2 LINE L2 3205 3262 -10 283 229 84 0 chr10 93218023 93218106 -47098659 + MER103 DNA DNA 67 156 -10 986 257 91 49 chr10 93218424 93218895 -47097870 + L1ME3A LINE L1 5680 6170 0 360 313 78 56 chr10 93219016 93219195 -47097570 - MIR SINE MIR -68 194 12 13001 180 35 33 chr10 93219298 93219967 -47096798 - L1MA3 LINE L1 0 7724 7058 1035 40 0 0 chr10 93219967 93220093 -47096672 + L1PA3 LINE L1 6030 6155 0 13001 180 35 33 chr10 93220093 93223772 -47092993 - L1MA3 LINE L1 -666 7058 3357 235 132 0 0 chr10 93223768 93223806 -47092959 + L1M1 LINE L1 713 750 -6815 * 1731 312 41 8 chr10 93223828 93224603 -47092162 - L1MEc LINE L1 -5410 1153 353 424 309 103 0 chr10 93225393 93225558 -47091207 - MIR SINE MIR -76 186 5 362 315 0 0 chr10 93226632 93226759 -47090006 - MLT1L LTR MaLR -137 478 352 260 220 110 64 chr10 93228457 93228566 -47088199 + MIR3 SINE MIR 65 178 -30 701 170 15 15 chr10 93228566 93228701 -47088064 - MLT1A1 LTR MaLR -2 372 238 722 230 155 0 chr10 93228702 93228915 -47087850 + MSTB2 LTR MaLR 1 246 -211 1402 192 57 170 chr10 93228924 93229730 -47087035 + LTR8A LTR ERV1 1 715 -12 288 258 11 22 chr10 93229733 93229822 -47086943 + MSTB2 LTR MaLR 252 339 -118 1549 171 58 76 chr10 93229848 93230311 -47086454 + LTR49 LTR ERV1 91 545 -50 706 172 17 52 chr10 93230357 93230531 -47086234 + MSTB2-int LTR MaLR 1484 1651 0 2336 158 33 33 chr10 93230531 93230988 -47085777 + MSTB2 LTR MaLR 1 457 0 1090 197 4 21 chr10 93230988 93231222 -47085543 - MLT1A1 LTR MaLR -135 230 1 376 306 30 25 chr10 93231263 93231462 -47085303 - MER102a DNA MER1_type -15 315 116 * 829 289 68 36 chr10 93231455 93231969 -47084796 + LTR33A LTR ERVL 15 520 -3 304 264 62 23 chr10 93231973 93232025 -47084740 - MER102a DNA MER1_type -196 134 85 1118 188 92 127 chr10 93232025 93232451 -47084314 - MLT2D LTR ERVL -3 411 1 304 264 62 23 chr10 93232451 93232527 -47084238 - MER102a DNA MER1_type -245 85 1 340 248 188 0 chr10 93232655 93232756 -47084009 + L2 LINE L2 3194 3313 0 233 330 0 34 chr10 93232770 93232858 -47083907 - L2 LINE L2 -5 3267 3183 11791 195 46 21 chr10 93233300 93233537 -47083228 - L1P5 LINE L1 -703 5508 5279 258 32 0 0 chr10 93233537 93233568 -47083197 + (TTA)n Simple_repeat Simple_repeat 2 32 0 11791 195 46 21 chr10 93233568 93235505 -47081260 - L1P5 LINE L1 -932 5279 3393 589 0 79 0 chr10 93235505 93235606 -47081159 + (TA)n Simple_repeat Simple_repeat 2 110 0 11791 195 46 21 chr10 93235606 93238791 -47077974 - L1P5 LINE L1 -2818 3393 1 3826 286 33 32 chr10 93238758 93240392 -47076373 - L1PBa LINE L1 -5226 1637 3 * 362 276 51 0 chr10 93240592 93240690 -47076075 - L2 LINE L2 0 3272 3170 206 363 50 0 chr10 93240925 93241005 -47075760 + L2 LINE L2 3149 3232 -40 734 250 19 19 chr10 93241638 93241846 -47074919 - MSTD LTR MaLR 0 396 189 470 156 46 0 chr10 93241981 93242078 -47074687 - MSTC LTR MaLR -295 101 1 341 339 26 56 chr10 93242388 93242583 -47074182 + L3 LINE CR1 117 305 -1272 3033 211 14 11 chr10 93242602 93243313 -47073452 - MER63C DNA MER1_type -149 781 69 333 235 0 0 chr10 93243330 93243415 -47073350 + (TA)n Simple_repeat Simple_repeat 2 86 0 186 43 0 0 chr10 93243517 93243540 -47073225 + (CA)n Simple_repeat Simple_repeat 2 24 0 242 130 0 93 chr10 93243554 93243608 -47073157 - MER63C DNA MER1_type -877 53 5 528 299 85 55 chr10 93244459 93244730 -47072035 + L2 LINE L2 2989 3267 -5 249 313 75 22 chr10 93245312 93245446 -47071319 + MER5A DNA MER1_type 7 147 -42 237 271 83 62 chr10 93245629 93245773 -47070992 + LTR16A1 LTR ERVL 180 326 -131 335 300 69 10 chr10 93245773 93246029 -47070736 - LTR16A1 LTR ERVL -8 449 120 2109 156 31 38 chr10 93246087 93246462 -47070303 + MLT2D LTR ERVL 1 374 -40 410 53 18 0 chr10 93246462 93246519 -47070246 + (CA)n Simple_repeat Simple_repeat 2 59 0 2109 156 31 38 chr10 93246519 93246560 -47070205 + MLT2D LTR ERVL 374 414 0 449 296 8 0 chr10 93246589 93246714 -47070051 + LTR16A1 LTR ERVL 330 455 -2 11456 164 31 11 chr10 93246732 93249777 -47066988 - L1PA13 LINE L1 0 6814 3728 8483 195 44 10 chr10 93249778 93251824 -47064941 - L1PA13 LINE L1 -3432 3365 1196 246 62 0 0 chr10 93251824 93251856 -47064909 + (CAG)n Simple_repeat Simple_repeat 1 32 0 8483 195 44 10 chr10 93251856 93252500 -47064265 - L1PA13 LINE L1 -5601 1196 575 211 239 0 0 chr10 93252501 93252547 -47064218 + MER5A DNA MER1_type 144 189 0 261 196 0 18 chr10 93252557 93252613 -47064152 - MLT1H LTR MaLR 0 549 495 292 234 32 21 chr10 93253708 93253802 -47062963 - MLT1H-int LTR MaLR -1640 95 1 226 194 48 0 chr10 93253802 93253864 -47062901 - MLT1H LTR MaLR 0 549 485 1658 174 3 17 chr10 93253864 93254191 -47062574 + AluJb SINE Alu 1 323 0 604 249 89 0 chr10 93255218 93255387 -47061378 - MLT1J2 LTR MaLR 0 450 267 2133 214 29 42 chr10 93255517 93256040 -47060725 + MLT1F1 LTR MaLR 52 567 0 519 236 34 58 chr10 93256040 93256247 -47060518 - MLT1J2 LTR MaLR -248 202 1 498 256 159 26 chr10 93256457 93256652 -47060113 - MIR SINE MIR -2 260 40 293 281 35 44 chr10 93256958 93257072 -47059693 + MIR SINE MIR 114 226 -36 338 295 0 0 chr10 93257140 93257218 -47059547 + L2 LINE L2 3186 3263 -9 389 328 103 5 chr10 93257469 93257664 -47059101 + L3b LINE CR1 1116 1329 -254 549 370 21 63 chr10 93258193 93258477 -47058288 - L2 LINE L2 -12 3260 2989 21 57 0 0 chr10 93258583 93258618 -47058147 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 93258851 93258883 -47057882 + AT_rich Low_complexity Low_complexity 1 32 0 314 123 18 0 chr10 93259286 93259343 -47057422 + GA-rich Low_complexity Low_complexity 2 59 0 267 200 29 29 chr10 93259457 93259527 -47057238 + MLT1K LTR MaLR 511 580 -8 565 271 65 35 chr10 93259823 93259949 -47056816 + MIR SINE MIR 27 165 -97 1660 165 3 33 chr10 93259949 93260252 -47056513 + AluJb SINE Alu 3 296 -16 565 271 65 35 chr10 93260252 93260354 -47056411 + MIR SINE MIR 165 262 0 405 303 72 33 chr10 93261142 93261294 -47055471 + MER5A DNA MER1_type 2 159 -30 273 242 16 0 chr10 93261635 93261697 -47055068 + MER20B DNA MER1_type 114 176 -607 341 224 0 0 chr10 93261977 93262044 -47054721 + MER69 DNA AcHobo 1 67 -2459 387 197 189 31 chr10 93262171 93262298 -47054467 + MER69 DNA AcHobo 2380 2526 0 978 169 33 5 chr10 93263140 93263324 -47053441 - MER5A DNA MER1_type 0 189 1 202 314 69 39 chr10 93263343 93263445 -47053320 + MER5B DNA MER1_type 12 116 -62 340 172 141 0 chr10 93263467 93263531 -47053234 + MER96 DNA MER1_type? 103 175 0 476 183 9 9 chr10 93263971 93264086 -47052679 - L1MC4 LINE L1 -2 8040 7926 190 73 49 0 chr10 93264154 93264195 -47052570 + CT-rich Low_complexity Low_complexity 1 43 0 1268 262 228 10 chr10 93264213 93264918 -47051847 - L1MC4 LINE L1 -364 7678 6820 258 148 0 0 chr10 93266461 93266515 -47050250 + (GA)n Simple_repeat Simple_repeat 1 54 0 750 188 93 122 chr10 93268373 93268614 -47048151 + LTR37B LTR ERV1 38 264 -204 1939 165 0 46 chr10 93268614 93268965 -47047800 - MER1B DNA MER1_type 0 337 3 750 188 93 122 chr10 93268965 93269132 -47047633 + LTR37B LTR ERV1 264 434 -34 761 228 27 0 chr10 93269908 93270092 -47046673 - LTR16A LTR ERVL -1 449 261 180 388 15 60 chr10 93270227 93270353 -47046412 + L2 LINE L2 2543 2658 -656 562 206 40 0 chr10 93270353 93270479 -47046286 + MER94 DNA DNA 1 131 -3 180 388 15 60 chr10 93270479 93270553 -47046212 + L2 LINE L2 2658 2734 -580 2191 201 24 0 chr10 93271410 93271832 -47044933 + MLT1A1-int LTR MaLR 1304 1735 0 1279 192 82 74 chr10 93271832 93272196 -47044569 + MLT1A1 LTR MaLR 1 358 -7 274 300 45 5 chr10 93272331 93272551 -47044214 - L1ME LINE L1 -236 5885 5657 38397 68 6 2 chr10 93272556 93278677 -47038088 - L1PA5 LINE L1 -6 6148 1 2537 151 26 7 chr10 93280287 93280705 -47036060 + MSTB LTR MaLR 1 426 0 884 282 65 96 chr10 93282026 93282660 -47034105 + MER21B LTR ERV1 101 714 -149 1019 224 53 20 chr10 93282737 93283095 -47033670 - MER114 LTR ERV -276 372 3 212 322 33 66 chr10 93283249 93283432 -47033333 + L2 LINE L2 2747 2923 -391 349 262 18 48 chr10 93285646 93285814 -47030951 - HAL1 LINE L1 -17 2490 2328 869 244 114 32 chr10 93286065 93286504 -47030261 - HAL1 LINE L1 -400 2107 1633 1452 191 35 4 chr10 93286504 93286760 -47030005 - AluJb SINE Alu -12 300 37 266 121 138 0 chr10 93286854 93286912 -47029853 + MER114 LTR ERV 401 466 -182 9535 145 14 0 chr10 93287595 93290347 -47026418 + L1MA1 LINE L1 3510 6302 0 24 0 0 0 chr10 93290942 93290966 -47025799 + AT_rich Low_complexity Low_complexity 1 24 0 414 153 45 99 chr10 93292380 93292491 -47024274 + MER21B LTR ERV1 1 105 -758 346 250 0 0 chr10 93292493 93292561 -47024204 + MER21B LTR ERV1 22 89 -774 3096 219 69 17 chr10 93292564 93293344 -47023421 + MER21B LTR ERV1 43 863 0 234 356 44 0 chr10 93293408 93293498 -47023267 - MIR SINE MIR -133 129 36 528 299 85 55 chr10 93294571 93294842 -47021923 + L2 LINE L2 2989 3267 -5 249 313 75 22 chr10 93295424 93295558 -47021207 + MER5A DNA MER1_type 7 147 -42 237 271 83 62 chr10 93295741 93295885 -47020880 + LTR16A1 LTR ERVL 180 326 -131 335 300 69 10 chr10 93295885 93296141 -47020624 - LTR16A1 LTR ERVL -8 449 120 2035 163 31 38 chr10 93296199 93296574 -47020191 + MLT2D LTR ERVL 1 374 -40 557 28 14 0 chr10 93296574 93296645 -47020120 + (CA)n Simple_repeat Simple_repeat 2 73 0 2035 163 31 38 chr10 93296645 93296686 -47020079 + MLT2D LTR ERVL 374 414 0 449 296 8 0 chr10 93296715 93296840 -47019925 + LTR16A1 LTR ERVL 330 455 -2 36099 95 9 4 chr10 93296858 93302997 -47013768 - L1PA13 LINE L1 0 6163 1 270 116 47 0 chr10 93303897 93303940 -47012825 - AluSp SINE Alu -138 165 121 201 39 0 0 chr10 93304365 93304391 -47012374 + (GA)n Simple_repeat Simple_repeat 2 27 0 26 30 0 0 chr10 93304413 93304446 -47012319 + AT_rich Low_complexity Low_complexity 1 33 0 225 146 55 36 chr10 93304451 93304506 -47012259 - L1ME4a LINE L1 -2 6119 6064 237 222 103 32 chr10 93304684 93304810 -47011955 - L1ME LINE L1 -318 5803 5669 253 310 120 22 chr10 93305129 93305315 -47011450 - L2 LINE L2 -298 2974 2778 24 85 0 0 chr10 93305728 93305787 -47010978 + AT_rich Low_complexity Low_complexity 1 59 0 1578 183 3 36 chr10 93305953 93306096 -47010669 + AluJb SINE Alu 1 147 -165 1813 137 0 67 chr10 93306096 93306410 -47010355 + AluSx SINE Alu 1 293 -19 1578 183 3 36 chr10 93306410 93306572 -47010193 + AluJb SINE Alu 147 296 -16 581 137 0 0 chr10 93306726 93306821 -47009944 - L1PA5 LINE L1 -11 6143 6049 3401 189 39 18 chr10 93307121 93307910 -47008855 - L1MA9 LINE L1 0 6312 5507 7876 211 20 41 chr10 93307911 93308375 -47008390 - L1MA9 LINE L1 -743 5403 4931 1957 170 13 86 chr10 93308375 93308839 -47007926 + MSTB1 LTR MaLR 3 432 0 7876 211 20 41 chr10 93308839 93309219 -47007546 - L1MA9 LINE L1 -1215 4931 4545 2302 120 0 0 chr10 93309219 93309528 -47007237 + AluSg SINE Alu 1 309 -1 7876 211 20 41 chr10 93309528 93309568 -47007197 - L1MA9 LINE L1 -1601 4545 4506 1054 77 11 33 chr10 93309568 93309751 -47007014 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 7876 211 20 41 chr10 93309751 93311089 -47005676 - L1MA9 LINE L1 -1640 4506 3244 686 320 40 18 chr10 93311516 93311744 -47005021 - MIR SINE MIR 0 262 30 7136 204 58 88 chr10 93311938 93313739 -47003026 - MER52A LTR ERV1 -8 1747 1 309 385 35 6 chr10 93314518 93314692 -47002073 + L1ME4a LINE L1 5725 5903 -218 411 233 33 40 chr10 93314711 93314861 -47001904 + L1ME4a LINE L1 5963 6111 -10 499 239 18 170 chr10 93315407 93315796 -47000969 + L2 LINE L2 2943 3272 0 222 91 0 0 chr10 93315961 93315994 -47000771 + (TG)n Simple_repeat Simple_repeat 2 34 0 429 343 53 10 chr10 93316070 93316277 -47000488 + MIR SINE MIR 34 249 -13 1139 200 36 4 chr10 93318580 93318805 -46997960 - MER46A DNA MER2_type -1 235 4 1134 223 5 5 chr10 93318901 93319125 -46997640 - MER58A DNA MER1_type 0 224 1 463 165 205 16 chr10 93319850 93319977 -46996788 + MER5A DNA MER1_type 10 160 -29 26 0 0 0 chr10 93320723 93320749 -46996016 + AT_rich Low_complexity Low_complexity 1 26 0 194 231 0 58 chr10 93320749 93320801 -46995964 - MER5B DNA MER1_type -124 54 6 22 0 0 0 chr10 93322152 93322174 -46994591 + AT_rich Low_complexity Low_complexity 1 22 0 2276 82 0 0 chr10 93322267 93322396 -46994369 + AluSq SINE Alu 3 131 -189 198 0 0 0 chr10 93322396 93322418 -46994347 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2276 82 0 0 chr10 93322418 93322606 -46994159 + AluSq SINE Alu 130 320 0 313 222 81 15 chr10 93322606 93322740 -46994025 - L1ME LINE L1 -682 5439 5297 23 33 0 0 chr10 93322980 93323010 -46993755 + AT_rich Low_complexity Low_complexity 1 30 0 336 299 8 34 chr10 93323109 93323226 -46993539 - L2 LINE L2 -251 3021 2908 216 343 104 20 chr10 93323347 93323598 -46993167 - L2 LINE L2 -2409 905 634 345 344 131 5 chr10 93323805 93324026 -46992739 + MIR SINE MIR 1 249 -13 395 276 270 5 chr10 93324546 93324742 -46992023 - MIR SINE MIR -13 249 2 1194 219 84 7 chr10 93324832 93325129 -46991636 - MLT2D LTR ERVL -4 410 91 475 288 37 60 chr10 93325473 93325688 -46991077 - MIR SINE MIR 0 262 53 4615 171 34 24 chr10 93326082 93327540 -46989225 - L1MB1 LINE L1 0 6404 4916 8356 53 113 6 chr10 93327543 93328688 -46988077 + L1PA3 LINE L1 4 1271 -4875 21640 30 7 0 chr10 93328710 93332077 -46984688 + L1PA3 LINE L1 2782 6155 0 6580 210 64 9 chr10 93332118 93334009 -46982756 - L1MB1 LINE L1 -1455 4927 2814 2174 261 72 16 chr10 93334047 93335090 -46981675 - L1MB1 LINE L1 -3983 2399 1216 222 236 90 22 chr10 93335954 93336043 -46980722 + L2 LINE L2 3178 3272 0 239 146 18 0 chr10 93336899 93336954 -46979811 + (TG)n Simple_repeat Simple_repeat 1 56 0 5886 143 61 35 chr10 93337031 93338161 -46978604 - Tigger3b DNA MER2_type -5 1226 68 2600 279 52 8 chr10 93338177 93339290 -46977475 + L1ME3 LINE L1 4899 6065 -97 770 216 132 0 chr10 93339301 93339514 -46977251 + L1ME3 LINE L1 5915 6155 -7 428 222 0 0 chr10 93339554 93339635 -46977130 - Tigger3b DNA MER2_type -1141 90 10 2223 81 0 34 chr10 93340759 93341055 -46975710 - AluSc SINE Alu -23 286 1 21 0 0 0 chr10 93341160 93341181 -46975584 + AT_rich Low_complexity Low_complexity 1 21 0 337 329 120 17 chr10 93341371 93341605 -46975160 - L1MC/D LINE L1 -1988 5820 5563 308 298 84 36 chr10 93342247 93342556 -46974209 + HAL1b LINE L1 116 439 -909 726 167 23 23 chr10 93342590 93342722 -46974043 + AluJ SINE Alu 2 133 -169 22 0 0 0 chr10 93342722 93342744 -46974021 + AT_rich Low_complexity Low_complexity 1 22 0 312 296 23 0 chr10 93342744 93342832 -46973933 - L1MC4 LINE L1 -1339 6703 6614 757 224 0 7 chr10 93342837 93343009 -46973756 + AluJ SINE Alu 141 311 0 1874 234 59 46 chr10 93343010 93343582 -46973183 + L1ME1 LINE L1 5597 6333 -1 317 368 18 0 chr10 93343621 93343792 -46972973 + HAL1b LINE L1 469 642 -706 882 209 113 32 chr10 93344038 93344383 -46972382 + L1MC4a LINE L1 5945 6317 -1491 3288 98 35 4 chr10 93344485 93344965 -46971800 - LTR19B LTR ERV1 0 580 86 444 246 30 22 chr10 93344956 93345090 -46971675 + MLT1G LTR MaLR 444 578 -12 * 391 216 11 0 chr10 93345100 93345188 -46971577 + L1MC4 LINE L1 7090 7178 -864 * 12126 212 26 12 chr10 93345187 93346910 -46969855 + L1P4 LINE L1 2750 4447 -2422 2330 109 0 0 chr10 93346910 93347212 -46969553 + AluSc SINE Alu 1 302 -7 12126 212 26 12 chr10 93347212 93347651 -46969114 + L1P4 LINE L1 4447 4878 -1991 1972 132 7 17 chr10 93347651 93347946 -46968819 - AluSc SINE Alu -17 292 1 12126 212 26 12 chr10 93347946 93348106 -46968659 + L1P4 LINE L1 4878 5034 -1835 198 71 0 0 chr10 93348106 93348134 -46968631 + (CA)n Simple_repeat Simple_repeat 2 29 0 12126 212 26 12 chr10 93348134 93349305 -46967460 + L1P4 LINE L1 5034 6297 -572 3541 134 42 28 chr10 93349305 93349937 -46966828 + L1PA16 LINE L1 5522 6165 -1 352 269 56 101 chr10 93349943 93350229 -46966536 - L1MC/D LINE L1 -2221 5587 5315 1542 243 57 17 chr10 93350303 93350746 -46966019 + L1MC4 LINE L1 7171 7636 -406 2552 61 0 3 chr10 93350746 93351056 -46965709 + AluY SINE Alu 1 309 -2 1542 243 57 17 chr10 93351056 93351089 -46965676 + L1MC4 LINE L1 7636 7666 -376 430 292 47 51 chr10 93351297 93351371 -46965394 + L1M4 LINE L1 2602 2675 -3471 3640 69 0 4 chr10 93351371 93351848 -46964917 + L1PA6 LINE L1 5680 6154 0 430 292 47 51 chr10 93351848 93352225 -46964540 + L1M4 LINE L1 2675 3051 -3095 27 49 0 0 chr10 93352851 93352892 -46963873 + AT_rich Low_complexity Low_complexity 1 41 0 322 299 149 42 chr10 93353551 93353765 -46963000 + MIR SINE MIR 2 238 -24 312 250 100 50 chr10 93354434 93354554 -46962211 + L2 LINE L2 3178 3303 -10 354 353 144 12 chr10 93354644 93354817 -46961948 - L2 LINE L2 -11 3261 3066 442 271 53 53 chr10 93355820 93356082 -46960683 + MIR SINE MIR 1 262 0 269 140 20 0 chr10 93356244 93356294 -46960471 - MLT1K LTR MaLR -29 559 509 1999 153 0 19 chr10 93357054 93357456 -46959309 - AluSx SINE Alu 0 396 1 34 42 0 0 chr10 93357491 93357539 -46959226 + AT_rich Low_complexity Low_complexity 1 48 0 237 271 0 0 chr10 93357662 93357721 -46959044 + MLT1L LTR MaLR 194 252 -363 460 257 56 84 chr10 93357824 93358051 -46958714 + MLT1L LTR MaLR 291 613 -2 26 0 0 0 chr10 93358126 93358152 -46958613 + AT_rich Low_complexity Low_complexity 1 26 0 387 338 113 17 chr10 93359012 93359305 -46957460 - L2 LINE L2 -924 2390 2070 1540 214 26 10 chr10 93359844 93360147 -46956618 - AluJb SINE Alu -4 308 1 191 400 71 7 chr10 93360572 93360712 -46956053 - L3 LINE CR1 -439 1138 990 471 258 72 72 chr10 93360716 93360910 -46955855 + MIR SINE MIR 32 225 -37 1862 134 21 0 chr10 93361598 93361881 -46954884 + AluSx SINE Alu 21 309 -3 395 314 132 0 chr10 93362507 93362666 -46954099 - MIR SINE MIR -19 243 64 1257 204 39 81 chr10 93366663 93367070 -46949695 + MLT1B LTR MaLR 1 390 0 649 309 14 0 chr10 93367829 93368036 -46948729 + MIR SINE MIR 53 262 0 665 296 49 4 chr10 93368130 93368373 -46948392 - MER67D LTR ERV1 0 514 261 847 188 62 49 chr10 93368384 93368788 -46947977 + MLT2D LTR ERVL 57 464 0 * 1420 154 0 61 chr10 93368788 93369066 -46947699 - MER67D LTR ERV1 -249 265 5 33 43 0 0 chr10 93369133 93369180 -46947585 + AT_rich Low_complexity Low_complexity 1 47 0 2310 93 0 19 chr10 93369403 93369713 -46947052 + AluSp SINE Alu 1 304 -9 481 270 133 47 chr10 93370293 93370504 -46946261 + MIR SINE MIR 10 238 -24 187 295 216 21 chr10 93371213 93371403 -46945362 - L2 LINE L2 -431 2883 2657 302 373 67 20 chr10 93372160 93372460 -46944305 - L2 LINE L2 -1178 2136 1823 329 310 16 31 chr10 93372566 93372695 -46944070 + LTR67 LTR ERVL 92 218 -339 331 254 78 51 chr10 93372755 93372972 -46943793 + L1ME LINE L1 5586 5808 -313 241 260 65 24 chr10 93373827 93373950 -46942815 - MLT1L LTR MaLR -50 565 438 249 294 12 0 chr10 93374036 93374121 -46942644 - MLT1J LTR MaLR -331 180 95 299 280 42 17 chr10 93374138 93374256 -46942509 + MIR SINE MIR 124 244 -18 41 21 0 0 chr10 93374326 93374374 -46942391 + AT_rich Low_complexity Low_complexity 1 48 0 1480 256 134 50 chr10 93374374 93375383 -46941382 - HAL1 LINE L1 0 2507 1415 792 258 123 32 chr10 93375407 93375910 -46940855 - HAL1 LINE L1 -1466 1041 493 462 259 61 61 chr10 93376319 93376581 -46940184 + MIR SINE MIR 1 262 0 275 194 111 0 chr10 93376723 93376795 -46939970 - MLT1K LTR MaLR 0 588 509 317 314 81 35 chr10 93376987 93377159 -46939606 - MLT1K LTR MaLR -268 320 141 1978 107 7 37 chr10 93378288 93378613 -46938152 + AluSx SINE Alu 1 312 0 3484 146 22 49 chr10 93378620 93379335 -46937430 - LTR1 LTR ERV1 -89 696 1 462 243 92 92 chr10 93379554 93379871 -46936894 - L1 LINE L1 -2951 3195 2879 2679 113 0 0 chr10 93380201 93380565 -46936200 + THE1B LTR MaLR 1 364 0 1895 184 5 52 chr10 93380902 93381325 -46935440 - MER57A LTR ERV1 0 403 1 253 300 30 0 chr10 93381487 93381587 -46935178 - HAL1b LINE L1 -778 570 468 23 33 0 0 chr10 93381991 93382021 -46934744 + AT_rich Low_complexity Low_complexity 1 30 0 12211 198 16 34 chr10 93382022 93386356 -46930409 - L1PA16 LINE L1 -9 6860 2449 1436 225 0 10 chr10 93386356 93386645 -46930120 + AluJb SINE Alu 2 287 -25 12211 198 16 34 chr10 93386645 93387113 -46929652 - L1PA16 LINE L1 -4420 2449 1974 2770 13 0 0 chr10 93387113 93387414 -46929351 + AluYa5 SINE Alu 1 301 -10 12211 198 16 34 chr10 93387414 93388800 -46927965 - L1PA16 LINE L1 -4895 1974 734 1049 161 83 0 chr10 93388794 93388987 -46927778 - L1PA16 LINE L1 -6640 209 1 * 23 0 0 0 chr10 93390356 93390379 -46926386 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr10 93390436 93390475 -46926290 + (CA)n Simple_repeat Simple_repeat 2 40 0 938 262 91 32 chr10 93390723 93391171 -46925594 - MLT1D LTR MaLR 0 467 1 353 328 47 0 chr10 93391197 93391325 -46925440 + L2 LINE L2 3180 3313 0 2001 134 108 3 chr10 93392426 93392813 -46923952 + MSTA LTR MaLR 1 428 0 282 332 62 42 chr10 93392840 93393147 -46923618 + L2 LINE L2 1384 1696 -1618 203 241 17 17 chr10 93393199 93393257 -46923508 + (CTCA)n Simple_repeat Simple_repeat 3 60 0 4806 102 19 21 chr10 93393457 93394212 -46922553 + L1PB1 LINE L1 5394 6146 -5 819 268 32 86 chr10 93394225 93394726 -46922039 + MLT1G3 LTR MaLR 16 555 0 485 191 17 9 chr10 93395013 93395128 -46921637 + MER103 DNA DNA 2 117 -49 336 268 121 42 chr10 93397156 93397346 -46919419 + L2 LINE L2 3017 3221 -92 343 293 118 17 chr10 93397670 93397957 -46918808 + L2 LINE L2 824 1139 -2175 261 271 125 31 chr10 93397964 93398060 -46918705 - MIR3 SINE MIR -36 172 68 320 307 222 0 chr10 93398074 93398227 -46918538 - MIR SINE MIR -7 255 69 311 311 9 28 chr10 93398231 93398337 -46918428 - L2 LINE L2 0 3272 3169 496 295 152 22 chr10 93398352 93398576 -46918189 - MIR SINE MIR -7 255 3 711 221 111 30 chr10 93399451 93399650 -46917115 - MER20 DNA MER1_type 0 219 5 502 274 38 59 chr10 93399650 93399836 -46916929 - MIR SINE MIR -55 207 26 288 0 0 0 chr10 93400990 93401022 -46915743 + (CAA)n Simple_repeat Simple_repeat 2 33 0 734 328 32 4 chr10 93401110 93401360 -46915405 + MIR SINE MIR 5 261 -1 2402 75 7 0 chr10 93402344 93402650 -46914115 + AluSq SINE Alu 1 308 -5 374 56 0 19 chr10 93402673 93402727 -46914038 + (GAAAA)n Simple_repeat Simple_repeat 3 55 0 562 261 171 0 chr10 93403627 93403803 -46912962 + MIR SINE MIR 57 262 0 196 237 0 0 chr10 93404106 93404144 -46912621 - L2 LINE L2 -32 3281 3244 634 296 5 23 chr10 93404189 93404405 -46912360 - Zaphod DNA AcHobo -3818 213 2 287 247 47 113 chr10 93404431 93404477 -46912288 - MIR SINE MIR -114 148 101 2166 119 6 13 chr10 93404477 93404789 -46911976 - AluSx SINE Alu -2 310 1 287 247 47 113 chr10 93404789 93404892 -46911873 - MIR SINE MIR -161 101 9 780 91 0 0 chr10 93405311 93405371 -46911394 + (TCCC)n Simple_repeat Simple_repeat 1 170 0 780 91 0 0 chr10 93405371 93405481 -46911284 + (TCCC)n Simple_repeat Simple_repeat 3 112 0 20320 153 32 35 chr10 93405670 93407972 -46908793 - L1MA3 LINE L1 0 7724 5417 2166 131 3 6 chr10 93407972 93408285 -46908480 - AluSq SINE Alu -1 312 1 20320 153 32 35 chr10 93408285 93408353 -46908412 - L1MA3 LINE L1 -2307 5417 5350 2033 133 0 48 chr10 93408353 93408668 -46908097 - AluSx SINE Alu -12 300 1 20320 153 32 35 chr10 93408668 93409078 -46907687 - L1MA3 LINE L1 -2374 5350 4940 629 116 0 11 chr10 93409078 93409173 -46907592 - AluSc SINE Alu -13 296 203 20320 153 32 35 chr10 93409173 93414034 -46902731 - L1MA3 LINE L1 -2784 4940 7 370 284 34 14 chr10 93414034 93414182 -46902583 - L2 LINE L2 -1 3312 3162 2206 171 31 38 chr10 93414411 93414603 -46902162 - MER67C LTR ERV1 0 710 518 2305 102 3 3 chr10 93414603 93414908 -46901857 + AluSc SINE Alu 1 305 -4 2206 171 31 38 chr10 93414908 93415344 -46901421 - MER67C LTR ERV1 -192 518 10 194 368 86 11 chr10 93415708 93415882 -46900883 - MIR3 SINE MIR -6 202 16 1237 170 27 36 chr10 93416175 93416399 -46900366 - AluJb SINE Alu -19 293 72 581 115 21 10 chr10 93416733 93416829 -46899936 + MER4A LTR ERV1 1 97 -567 * 1616 128 19 67 chr10 93416826 93417192 -46899573 + MER4A LTR ERV1 257 664 0 2406 92 94 15 chr10 93417194 93417598 -46899167 + MER4A-int LTR ERV1 1 436 -6162 370 130 65 22 chr10 93417869 93417961 -46898804 + MER4A-int LTR ERV1 1262 1357 -5241 3370 71 0 9 chr10 93417961 93418413 -46898352 - LTR7 LTR ERV1 -2 448 1 2385 77 45 13 chr10 93418413 93418791 -46897974 - HERVH LTR ERV1 0 7713 7324 1349 117 19 0 chr10 93418793 93419007 -46897758 - HERVH LTR ERV1 -1896 5817 5600 4069 149 0 1 chr10 93419008 93419671 -46897094 - HERVH LTR ERV1 -2564 5149 4488 3200 119 0 8 chr10 93419665 93420178 -46896587 - HERVH LTR ERV1 -3713 4000 3492 * 870 140 7 0 chr10 93420168 93420318 -46896447 - HERVH LTR ERV1 -4423 3290 3140 * 18982 100 16 13 chr10 93420297 93423282 -46893483 - HERVH LTR ERV1 -4718 2995 1 3298 64 4 13 chr10 93423284 93423736 -46893029 - LTR7 LTR ERV1 -2 448 1 818 273 28 5 chr10 93423736 93423952 -46892813 + MER4A-int LTR ERV1 1940 2160 -4171 2319 196 84 42 chr10 93423996 93424908 -46891857 + MER4A-int LTR ERV1 196 1189 -5569 3498 101 117 10 chr10 93424920 93425595 -46891170 + MER4A-int LTR ERV1 1756 2502 -4096 2163 130 14 0 chr10 93425595 93425888 -46890877 - AluSx SINE Alu -15 297 1 1084 156 147 0 chr10 93425892 93426116 -46890649 - LTR8 LTR ERV1 -434 257 1 1689 118 185 71 chr10 93426116 93426640 -46890125 + MER4A-int LTR ERV1 2737 3320 -3278 14070 110 73 17 chr10 93426644 93429177 -46887588 + MER4A-int LTR ERV1 3919 6593 -5 358 178 100 11 chr10 93429188 93429278 -46887487 + MER4A LTR ERV1 1 98 -566 1351 169 5 77 chr10 93429278 93429650 -46887115 + MER4A LTR ERV1 261 664 0 496 205 49 0 chr10 93430509 93430631 -46886134 + MER103 DNA DNA 8 135 -31 376 234 81 8 chr10 93430816 93430940 -46885825 + MER113 DNA MER1_type? 90 222 -299 2546 161 72 36 chr10 93431359 93431856 -46884909 - MLT2B2 LTR ERVL 0 515 1 355 277 69 64 chr10 93431912 93432114 -46884651 - L1MC4 LINE L1 -116 7926 7724 1000 145 120 10 chr10 93432354 93432554 -46884211 + MLT2B3 LTR ERVL 1 222 -332 26 0 0 0 chr10 93432883 93432909 -46883856 + AT_rich Low_complexity Low_complexity 1 26 0 208 328 129 35 chr10 93433483 93433599 -46883166 - MIR SINE MIR -66 142 16 196 291 122 47 chr10 93434662 93434834 -46881931 + L2 LINE L2 3128 3312 -1 533 316 42 0 chr10 93435591 93435759 -46881006 - MIR SINE MIR -86 176 2 24 77 0 0 chr10 93436505 93436557 -46880208 + AT_rich Low_complexity Low_complexity 1 52 0 1843 172 16 9 chr10 93437163 93437540 -46879225 - MLT1A1 LTR MaLR -6 359 1 437 178 93 9 chr10 93438193 93438300 -46878465 + L1MA3 LINE L1 19 134 -7431 * 13391 173 39 14 chr10 93438297 93438953 -46877812 + L1MA3 LINE L1 1105 1743 -5822 333 0 0 0 chr10 93438953 93438990 -46877775 + (GA)n Simple_repeat Simple_repeat 2 38 0 13391 173 39 14 chr10 93438990 93442331 -46874434 + L1MA3 LINE L1 1743 5206 -2359 3451 129 8 13 chr10 93442359 93443407 -46873358 + L1MA3 LINE L1 6129 7168 -555 1973 130 58 22 chr10 93443407 93443769 -46872996 + THE1C LTR MaLR 1 375 0 3030 120 99 0 chr10 93443769 93444294 -46872471 + THE1C-int LTR MaLR 1 577 -1003 1871 119 3 3 chr10 93444301 93444595 -46872170 + THE1C-int LTR MaLR 1287 1580 0 1989 113 49 23 chr10 93444595 93444933 -46871832 + THE1C LTR MaLR 1 347 -28 1683 209 64 25 chr10 93444933 93445373 -46871392 - LTR2B LTR ERV1 0 490 34 3161 110 21 37 chr10 93445420 93445991 -46870774 + L1MA3 LINE L1 7163 7724 0 1994 150 3 16 chr10 93447137 93447504 -46869261 - L1P5 LINE L1 -360 5796 5435 21 0 0 0 chr10 93448256 93448277 -46868488 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 93450005 93450033 -46866732 + AT_rich Low_complexity Low_complexity 1 28 0 38604 62 5 0 chr10 93450033 93456005 -46860760 - L1PA5 LINE L1 -11 6143 150 1567 57 0 26 chr10 93456005 93456232 -46860533 - pTR5 LTR ERV1 -2046 392 172 327 235 10 0 chr10 93456235 93456333 -46860432 - LTR30 LTR ERV1 -80 642 544 3767 120 102 78 chr10 93456333 93457251 -46859514 - pTR5 LTR ERV1 -413 2025 776 1063 87 0 0 chr10 93457271 93457421 -46859344 - L1P LINE L1 -5994 152 3 2884 134 23 6 chr10 93457442 93457912 -46858853 + L1PB2 LINE L1 5671 6148 -3 21 0 0 0 chr10 93457916 93457937 -46858828 + AT_rich Low_complexity Low_complexity 1 21 0 188 170 19 0 chr10 93457938 93457991 -46858774 + (TA)n Simple_repeat Simple_repeat 1 54 0 1358 247 102 2 chr10 93458027 93458420 -46858345 - MLT2B1 LTR ERVL -68 452 21 27 29 0 0 chr10 93459240 93459274 -46857491 + AT_rich Low_complexity Low_complexity 1 34 0 192 286 137 48 chr10 93459557 93459725 -46857040 + L2 LINE L2 2297 2479 -835 786 354 5 68 chr10 93459786 93460181 -46856584 + L2 LINE L2 2903 3272 0 2401 125 28 14 chr10 93460418 93460777 -46855988 + THE1B LTR MaLR 1 364 0 259 326 139 59 chr10 93463779 93464067 -46852698 + L2 LINE L2 3003 3313 0 356 207 14 69 chr10 93464652 93464797 -46851968 + MER113 DNA MER1_type? 7 143 -378 463 350 29 36 chr10 93466166 93466446 -46850319 + L2 LINE L2 3032 3309 -4 249 292 19 106 chr10 93466911 93467072 -46849693 - MIR SINE MIR -42 220 74 287 384 15 8 chr10 93467667 93467800 -46848965 + MIR3 SINE MIR 66 199 -9 1501 169 188 6 chr10 93468204 93468566 -46848199 + MSTA LTR MaLR 1 428 0 3848 165 26 4 chr10 93469265 93469999 -46846766 - L1MB4 LINE L1 0 6180 5431 23 33 0 0 chr10 93470415 93470445 -46846320 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 93470582 93470610 -46846155 + AT_rich Low_complexity Low_complexity 1 28 0 2630 182 57 58 chr10 93472112 93472291 -46844474 + LTR9B LTR ERV1 7 185 -459 2050 89 50 14 chr10 93472291 93472573 -46844192 + AluY SINE Alu 11 302 -9 2630 182 57 58 chr10 93472573 93473030 -46843735 + LTR9B LTR ERV1 185 642 -2 634 192 56 16 chr10 93473121 93473282 -46843483 + HUERS-P3 LTR ERV1 411 559 -6859 5869 182 31 17 chr10 93473288 93475115 -46841650 + HUERS-P3 LTR ERV1 747 2884 -5318 1782 216 5 30 chr10 93475112 93475515 -46841250 + HUERS-P3 LTR ERV1 6520 6912 -2007 * 428 218 0 1 chr10 93475526 93475628 -46841137 + HUERS-P3 LTR ERV1 6846 6934 -484 712 178 18 12 chr10 93475648 93475831 -46840934 + HUERS-P3 LTR ERV1 3754 4320 -560 1142 194 19 9 chr10 93476130 93476346 -46840419 + HUERS-P3 LTR ERV1 8702 8919 0 2528 196 56 38 chr10 93476352 93476979 -46839786 + LTR9B LTR ERV1 7 644 0 219 298 130 53 chr10 93477490 93477621 -46839144 + MIR3 SINE MIR 10 150 -58 25 0 0 0 chr10 93477831 93477856 -46838909 + AT_rich Low_complexity Low_complexity 1 25 0 396 319 42 88 chr10 93478312 93478597 -46838168 + L2 LINE L2 2995 3266 -6 399 329 14 7 chr10 93479644 93479784 -46836981 + HsTC2 DNA Tc2 1 141 -1757 445 122 27 0 chr10 93479801 93479875 -46836890 + HsTC2 DNA Tc2 1281 1356 -542 263 194 0 65 chr10 93479891 93479984 -46836781 + L1MB8 LINE L1 5923 6009 -169 894 169 26 11 chr10 93479985 93480174 -46836591 + L1MB8 LINE L1 5981 6172 -6 344 222 201 14 chr10 93480219 93480363 -46836402 + HsTC2 DNA Tc2 1574 1744 -154 396 243 0 47 chr10 93480575 93480682 -46836083 - LTR33 LTR ERVL -308 213 112 5341 210 35 40 chr10 93480702 93481782 -46834983 - Charlie1a DNA MER1_type -1311 1450 379 846 189 13 19 chr10 93481782 93481941 -46834824 - FAM SINE Alu -17 158 1 5341 210 35 40 chr10 93481941 93482309 -46834456 - Charlie1a DNA MER1_type -2382 379 10 261 157 26 64 chr10 93482460 93482567 -46834198 + HsTC2 DNA Tc2 1788 1893 -5 222 91 0 0 chr10 93483545 93483578 -46833187 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 415 293 134 0 chr10 93483807 93483964 -46832801 + MIR SINE MIR 45 222 -40 22 35 0 0 chr10 93486177 93486206 -46830559 + AT_rich Low_complexity Low_complexity 1 29 0 218 277 234 0 chr10 93486708 93486849 -46829916 + MIR SINE MIR 25 198 -64 201 167 0 0 chr10 93487019 93487055 -46829710 + T-rich Low_complexity Low_complexity 1 36 0 2196 131 0 6 chr10 93488445 93488758 -46828007 - AluSx SINE Alu -1 311 1 462 261 58 5 chr10 93489038 93489245 -46827520 + L1ME LINE L1 5562 5779 -342 268 158 108 58 chr10 93489380 93489500 -46827265 + L1ME4a LINE L1 5985 6110 -11 29 28 0 0 chr10 93489710 93489746 -46827019 + AT_rich Low_complexity Low_complexity 1 36 0 40412 38 22 1 chr10 93490393 93496421 -46820344 - L1PA3 LINE L1 0 6155 2 23 0 0 0 chr10 93497710 93497733 -46819032 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 93498586 93498608 -46818157 + AT_rich Low_complexity Low_complexity 1 22 0 315 278 0 14 chr10 93498613 93498685 -46818080 - L2 LINE L2 -6 3266 3196 194 352 0 0 chr10 93499535 93499589 -46817176 - MER5A DNA MER1_type 0 189 136 325 264 40 8 chr10 93499937 93500062 -46816703 - L1MA8 LINE L1 0 6291 6163 2045 128 14 7 chr10 93500273 93500570 -46816195 + AluSx SINE Alu 1 299 -13 705 138 0 215 chr10 93500656 93500902 -46815863 - 7SK RNA RNA 0 193 1 6042 128 13 42 chr10 93501684 93503687 -46813078 - L1MA1 LINE L1 0 6302 4354 1331 139 27 5 chr10 93505119 93505342 -46811423 - L1PA15 LINE L1 -1 6164 5937 249 291 19 10 chr10 93505607 93505710 -46811055 - MLT1I LTR MaLR 0 409 306 578 308 102 18 chr10 93505876 93506210 -46810555 - MLT1I LTR MaLR -47 362 1 2083 128 4 0 chr10 93506427 93506708 -46810057 - AluSx SINE Alu -30 282 1 278 290 110 0 chr10 93507643 93507743 -46809022 - MIR SINE MIR -21 241 131 2210 105 79 18 chr10 93508392 93508735 -46808030 + THE1B LTR MaLR 1 364 0 216 311 56 11 chr10 93508738 93508828 -46807937 - MIR3 SINE MIR -10 198 105 460 324 14 24 chr10 93509572 93509779 -46806986 + MIR SINE MIR 3 207 -55 461 316 96 41 chr10 93509789 93510057 -46806708 + MLT1G LTR MaLR 2 309 -246 459 52 0 0 chr10 93510057 93510115 -46806650 + (GA)n Simple_repeat Simple_repeat 1 58 0 461 316 96 41 chr10 93510115 93510314 -46806451 + MLT1G LTR MaLR 309 495 -60 292 286 171 0 chr10 93510381 93510486 -46806279 - MIR SINE MIR -38 224 102 814 300 55 0 chr10 93510675 93510982 -46805783 - MLT1H LTR MaLR -224 325 2 434 290 0 0 chr10 93510982 93511089 -46805676 - MIR SINE MIR -154 108 2 372 273 11 0 chr10 93511203 93511303 -46805462 + MIR SINE MIR 52 153 -55 467 294 116 72 chr10 93513443 93513736 -46803029 - L2 LINE L2 0 3313 3008 253 204 0 0 chr10 93513803 93513852 -46802913 + AluJ/monomer SINE Alu 3 51 -252 1107 156 0 0 chr10 93513909 93514089 -46802676 + MSTA LTR MaLR 1 180 -248 481 266 8 0 chr10 93514093 93514217 -46802548 - MER58A DNA MER1_type 0 125 1 461 205 76 58 chr10 93514719 93514890 -46801875 - LTR33A LTR ERVL -60 463 290 2484 106 0 24 chr10 93515225 93515603 -46801162 - L1PB1 LINE L1 -1 6150 5782 326 221 0 0 chr10 93515608 93515676 -46801089 + L1MC4 LINE L1 6636 6703 -1339 354 195 0 0 chr10 93515681 93515758 -46801007 + (TA)n Simple_repeat Simple_repeat 1 77 0 714 102 0 62 chr10 93515761 93515889 -46800876 - L1P5 LINE L1 -360 5791 5672 222 156 0 0 chr10 93516301 93516346 -46800419 + (CA)n Simple_repeat Simple_repeat 2 46 0 186 363 106 22 chr10 93517533 93517712 -46799053 + L3 LINE CR1 1371 1564 -13 13298 37 0 0 chr10 93519459 93521833 -46794932 - L1PA4 LINE L1 0 6155 3779 10119 27 0 0 chr10 93521833 93523121 -46793644 + L1PA4 LINE L1 2491 3778 -2368 231 200 0 0 chr10 93523258 93523308 -46793457 + (TG)n Simple_repeat Simple_repeat 1 50 0 231 276 0 0 chr10 93523626 93523684 -46793081 + MLT1I LTR MaLR 91 148 -261 241 303 74 25 chr10 93523784 93523906 -46792859 + MLT1J2 LTR MaLR 263 390 -60 248 268 18 0 chr10 93524145 93524201 -46792564 + L2 LINE L2 3250 3306 -7 181 309 0 18 chr10 93524247 93524302 -46792463 - L2 LINE L2 -1 3271 3218 247 227 8 31 chr10 93524506 93524634 -46792131 + CT-rich Low_complexity Low_complexity 1 125 0 1597 175 18 72 chr10 93524718 93524792 -46791973 + MSTD LTR MaLR 3 79 -317 2149 120 0 7 chr10 93524792 93525093 -46791672 - AluSg SINE Alu -11 299 1 1597 175 18 72 chr10 93525093 93525365 -46791400 + MSTD LTR MaLR 79 328 -68 2237 140 6 6 chr10 93525365 93525708 -46791057 - MER61A LTR ERV1 0 343 1 1597 175 18 72 chr10 93525708 93525748 -46791017 + MSTD LTR MaLR 328 369 -27 418 375 42 19 chr10 93527397 93527613 -46789152 - MIR SINE MIR -6 256 36 377 317 7 0 chr10 93527613 93527758 -46789007 - LTR16C LTR ERVL 0 491 346 1350 167 57 66 chr10 93528442 93528808 -46787957 - THE1C LTR MaLR -12 363 1 487 29 14 14 chr10 93531565 93531635 -46785130 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 26 0 0 0 chr10 93531969 93531995 -46784770 + AT_rich Low_complexity Low_complexity 1 26 0 1134 181 14 32 chr10 93532765 93532981 -46783784 + AluJo SINE Alu 1 212 -100 24 0 0 0 chr10 93532989 93533013 -46783752 + AT_rich Low_complexity Low_complexity 1 24 0 2980 78 78 0 chr10 93533013 93533384 -46783381 + MLT2A1 LTR ERVL 5 412 -32 273 29 0 0 chr10 93533384 93533418 -46783347 + (TA)n Simple_repeat Simple_repeat 2 35 0 2980 78 78 0 chr10 93533418 93533454 -46783311 + MLT2A1 LTR ERVL 412 444 0 306 206 0 0 chr10 93533458 93533526 -46783239 + (TG)n Simple_repeat Simple_repeat 2 69 0 1782 216 49 18 chr10 93534738 93535191 -46781574 + MLT1C LTR MaLR 1 467 0 252 253 109 50 chr10 93535558 93535779 -46780986 + MER112 DNA MER1_type 10 243 -17 25 0 0 0 chr10 93536524 93536549 -46780216 + AT_rich Low_complexity Low_complexity 1 25 0 2920 93 21 0 chr10 93539370 93539824 -46776941 + L1PA10 LINE L1 5709 6171 0 548 345 47 91 chr10 93539932 93540723 -46776042 + L2 LINE L2 2521 3272 0 546 305 43 35 chr10 93541426 93541708 -46775057 - MLT1I LTR MaLR -26 383 100 2222 140 22 51 chr10 93541708 93542123 -46774642 + MER57A LTR ERV1 1 403 0 250 295 33 0 chr10 93542453 93542514 -46774251 + MIR SINE MIR 65 127 -81 299 255 55 90 chr10 93542713 93542858 -46773907 + MLT1J2 LTR MaLR 281 420 -30 296 256 58 0 chr10 93542902 93542988 -46773777 + MIR SINE MIR 160 250 -12 300 297 115 7 chr10 93543546 93543694 -46773071 - L1ME4a LINE L1 -2 6119 5956 403 279 88 17 chr10 93543698 93543995 -46772770 - L1ME4a LINE L1 -237 5884 5567 276 342 51 0 chr10 93545375 93545454 -46771311 - L2 LINE L2 -35 3237 3155 183 162 0 0 chr10 93546352 93546389 -46770376 + A-rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr10 93546406 93546446 -46770319 + AT_rich Low_complexity Low_complexity 1 40 0 2210 222 50 11 chr10 93546476 93547098 -46769667 + L1ME1 LINE L1 5516 6161 -5 281 290 43 22 chr10 93547131 93547269 -46769496 + L1MC5 LINE L1 7711 7851 -110 559 323 65 19 chr10 93547784 93547963 -46768802 - MLT1J2 LTR MaLR -7 443 274 3582 116 6 33 chr10 93547963 93548505 -46768260 - MER1A DNA MER1_type 0 527 1 559 323 65 19 chr10 93548505 93548693 -46768072 - MLT1J2 LTR MaLR -176 274 59 2446 59 10 7 chr10 93548724 93549030 -46767735 - AluY SINE Alu -4 307 1 272 309 24 0 chr10 93549136 93549220 -46767545 - MER5B DNA MER1_type -73 105 20 387 217 63 56 chr10 93549355 93549498 -46767267 - LTR16A LTR ERVL -6 444 301 402 320 107 11 chr10 93549796 93549974 -46766791 + MIR SINE MIR 12 206 -56 271 143 0 0 chr10 93550417 93550459 -46766306 + 5S rRNA rRNA 1 42 -79 418 239 108 23 chr10 93551060 93551190 -46765575 - MIR SINE MIR -48 214 74 241 238 38 0 chr10 93551205 93551285 -46765480 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 269 263 75 0 chr10 93551379 93551459 -46765306 + MER91C DNA MER1_type 20 105 -35 194 297 121 0 chr10 93553003 93553094 -46763671 - L2 LINE L2 0 3272 3171 1587 243 33 55 chr10 93553426 93553940 -46762825 + MLT1D LTR MaLR 3 505 0 374 285 118 56 chr10 93554004 93554309 -46762456 - MLT1K LTR MaLR -116 472 149 1632 227 48 24 chr10 93555389 93555843 -46760922 - MLT1C LTR MaLR -2 465 1 2641 187 40 21 chr10 93556008 93556579 -46760186 + MER90 LTR ERV1 32 613 -1 2068 136 35 37 chr10 93558147 93558523 -46758242 - THE1C LTR MaLR 0 375 1 1743 185 21 0 chr10 93559057 93559387 -46757378 - L1MC1 LINE L1 -18 6315 5979 23 0 0 0 chr10 93559881 93559904 -46756861 + AT_rich Low_complexity Low_complexity 1 23 0 1196 308 28 21 chr10 93559938 93560405 -46756360 + LTR38 LTR ERV1 87 556 0 315 281 56 56 chr10 93560740 93560900 -46755865 + MIR SINE MIR 53 212 -50 1186 230 184 8 chr10 93560958 93561425 -46755340 + MLT1F LTR MaLR 6 540 -2 297 207 46 0 chr10 93561669 93561756 -46755009 - MER103 DNA DNA -7 159 69 952 190 91 20 chr10 93561791 93562115 -46754650 + MSTD LTR MaLR 1 396 0 513 0 0 0 chr10 93562527 93562584 -46754181 + (TA)n Simple_repeat Simple_repeat 1 57 0 646 310 37 33 chr10 93563069 93563311 -46753454 - MIR SINE MIR -12 250 8 1113 183 27 71 chr10 93563618 93563954 -46752811 + MER33 DNA MER1_type 1 315 -9 712 216 98 20 chr10 93564415 93564669 -46752096 - L1ME LINE L1 -3394 2686 2413 5622 150 19 16 chr10 93564678 93565942 -46750823 - L1MA8 LINE L1 0 6291 5029 743 234 37 23 chr10 93565983 93566332 -46750433 - L1ME LINE L1 -3849 2231 1909 351 159 35 72 chr10 93566337 93566423 -46750342 - THE1B LTR MaLR -8 420 274 14480 200 18 7 chr10 93566424 93571564 -46745201 + L1PB1 LINE L1 1099 6183 -684 297 0 0 0 chr10 93571564 93571597 -46745168 + (TG)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chr10 93571596 93571624 -46745141 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 14480 200 18 7 chr10 93571597 93571984 -46744781 + L1PB1 LINE L1 6183 6867 0 23 0 0 0 chr10 93571984 93572007 -46744758 + AT_rich Low_complexity Low_complexity 1 23 0 2302 108 0 0 chr10 93572013 93572320 -46744445 - THE1B LTR MaLR -57 307 1 213 65 0 0 chr10 93572373 93572404 -46744361 + (CA)n Simple_repeat Simple_repeat 2 32 0 1084 307 68 4 chr10 93572468 93572995 -46743770 - L1ME LINE L1 -4462 1799 1239 387 270 63 81 chr10 93572995 93573169 -46743596 + LTR41 LTR ERVL 1 171 -602 299 255 47 31 chr10 93573622 93573813 -46742952 + LTR50 LTR ERVL 582 793 -2 1002 245 27 32 chr10 93573816 93574361 -46742404 - L1ME LINE L1 -4890 1190 627 347 261 70 0 chr10 93574368 93574483 -46742282 - L1ME LINE L1 -5583 487 365 1346 42 0 0 chr10 93575051 93575218 -46741547 + L1PA4 LINE L1 5989 6155 0 244 341 123 28 chr10 93575867 93576046 -46740719 + MLT1K LTR MaLR 186 381 -207 264 256 26 0 chr10 93576139 93576217 -46740548 + MER116 DNA Mariner 1 80 0 4096 190 30 33 chr10 93576264 93577684 -46739081 + L1MB4 LINE L1 4757 6174 -6 289 257 38 57 chr10 93578309 93578414 -46738351 + MIR SINE MIR 89 191 -71 486 287 94 88 chr10 93578935 93579528 -46737237 + HAL1 LINE L1 795 1391 -1116 277 82 41 0 chr10 93579532 93579581 -46737184 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 297 271 136 8 chr10 93579661 93579779 -46736986 + HAL1 LINE L1 1505 1637 -870 29 0 0 0 chr10 93579920 93579949 -46736816 + AT_rich Low_complexity Low_complexity 1 29 0 353 293 167 36 chr10 93580359 93580694 -46736071 + L1M4 LINE L1 2222 2600 -3546 1063 175 100 7 chr10 93580770 93581050 -46735715 + MER33 DNA MER1_type 19 324 0 501 276 179 10 chr10 93581711 93581907 -46734858 + MIR SINE MIR 7 235 -27 1789 174 178 25 chr10 93584231 93584669 -46732096 + MLT1D LTR MaLR 1 505 0 418 281 82 0 chr10 93585638 93585773 -46730992 - MIR SINE MIR -38 224 79 288 113 0 56 chr10 93586492 93586563 -46730202 + (TTCC)n Simple_repeat Simple_repeat 1 67 0 606 210 8 0 chr10 93587434 93587553 -46729212 + L1MA4 LINE L1 5909 6028 -272 42058 39 24 2 chr10 93587553 93593575 -46723190 + L1PA3 LINE L1 1 6155 0 1382 170 15 0 chr10 93593587 93593857 -46722908 + L1MA4 LINE L1 6015 6288 -12 3981 126 19 13 chr10 93594038 93594663 -46722102 + L1PA16 LINE L1 5529 6157 -9 868 288 92 2 chr10 93595121 93595510 -46721255 - LTR33 LTR ERVL -2 519 12 446 221 53 0 chr10 93596529 93596624 -46720141 - L2 LINE L2 -7 3306 3207 424 297 108 14 chr10 93596779 93596963 -46719802 - MLT1L LTR MaLR -58 547 275 2172 84 3 7 chr10 93597252 93597536 -46719229 - AluSc SINE Alu -26 283 1 816 144 0 0 chr10 93597750 93597868 -46718897 + FLAM_C SINE Alu 1 118 -25 215 31 31 0 chr10 93597868 93597900 -46718865 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2305 97 7 0 chr10 93597989 93598287 -46718478 + AluSx SINE Alu 1 300 -12 1830 161 0 20 chr10 93598492 93598791 -46717974 - AluJb SINE Alu -16 296 4 235 147 0 0 chr10 93598967 93599001 -46717764 + Alu SINE Alu 1 34 -267 21 57 0 0 chr10 93599011 93599046 -46717719 + AT_rich Low_complexity Low_complexity 1 35 0 1728 156 20 7 chr10 93599671 93599966 -46716799 + AluSg SINE Alu 3 301 -9 2206 84 39 0 chr10 93600255 93600540 -46716225 + AluY SINE Alu 1 296 -15 1878 161 0 13 chr10 93600732 93601037 -46715728 + AluJb SINE Alu 1 301 -11 1141 163 224 41 chr10 93601226 93601588 -46715177 - MSTC LTR MaLR 0 428 1 276 219 35 83 chr10 93601736 93601844 -46714921 + L1MC4 LINE L1 5269 5368 -2440 2233 82 3 20 chr10 93601844 93602147 -46714618 - AluSq SINE Alu -15 298 1 276 219 35 83 chr10 93602147 93602207 -46714558 + L1MC4 LINE L1 5368 5429 -2379 231 252 81 24 chr10 93602254 93602377 -46714388 + L1MC4 LINE L1 6933 7062 -980 2043 139 3 7 chr10 93602977 93603280 -46713485 + AluSx SINE Alu 2 303 -9 28 0 0 0 chr10 93603372 93603400 -46713365 + AT_rich Low_complexity Low_complexity 1 28 0 961 189 165 68 chr10 93603536 93603858 -46712907 - MLT1A1 LTR MaLR -12 353 1 888 204 96 36 chr10 93603958 93604292 -46712473 + L1M4 LINE L1 4465 4818 -1328 3872 158 32 21 chr10 93604295 93605015 -46711750 + Tigger1 DNA MER2_type 22 749 -1669 266 261 135 18 chr10 93607479 93607590 -46709175 - L2 LINE L2 0 3272 3149 311 146 0 0 chr10 93607739 93607787 -46708978 - L1MD3 LINE L1 -218 7777 7730 251 24 0 49 chr10 93608019 93608060 -46708705 + (TTTTG)n Simple_repeat Simple_repeat 3 180 0 2013 130 0 11 chr10 93608060 93608345 -46708420 - AluSx SINE Alu -1 322 1 307 316 29 7 chr10 93608354 93608493 -46708272 - MER103 DNA DNA -1 165 24 * 589 232 57 11 chr10 93608492 93608669 -46708096 + MER113 DNA MER1_type? 9 193 -328 2492 59 0 3 chr10 93609070 93609373 -46707392 - AluY SINE Alu -9 302 1 1284 140 0 0 chr10 93609883 93610062 -46706703 - AluSp SINE Alu -134 179 1 1535 188 11 121 chr10 93610067 93610545 -46706220 - L1ME1 LINE L1 -330 5836 5412 2504 88 3 25 chr10 93610547 93610727 -46706038 + L1PB1 LINE L1 5794 5963 -188 2718 10 0 3 chr10 93610727 93611028 -46705737 + AluYa5 SINE Alu 1 300 -11 2504 88 3 25 chr10 93611028 93611212 -46705553 + L1PB1 LINE L1 5963 6150 -1 2187 93 10 7 chr10 93611219 93611510 -46705255 + AluSq SINE Alu 1 292 -21 2276 112 3 0 chr10 93611731 93612035 -46704730 + AluSc SINE Alu 1 305 -4 815 179 0 0 chr10 93612050 93612173 -46704592 + FLAM_C SINE Alu 3 125 -18 370 215 21 21 chr10 93612284 93612377 -46704388 + L1M4 LINE L1 4532 4624 -1522 381 115 0 0 chr10 93612878 93612939 -46703826 + L1MB8 LINE L1 6110 6170 -8 1747 132 0 26 chr10 93613048 93613313 -46703452 - AluSx SINE Alu -20 292 35 2062 93 7 4 chr10 93613598 93613867 -46702898 - AluSx SINE Alu -14 298 29 2634 62 6 0 chr10 93613867 93614204 -46702561 + LTR14A LTR ERVK 6 344 0 276 242 42 42 chr10 93614204 93614245 -46702520 - AluY SINE Alu -259 41 1 563 249 40 43 chr10 93614250 93614503 -46702262 - L1ME4a LINE L1 -260 5861 5610 282 149 43 0 chr10 93614522 93614569 -46702196 - AluSx SINE Alu -253 50 2 1187 145 5 31 chr10 93614751 93614944 -46701821 - AluSx SINE Alu -123 189 2 24 0 0 0 chr10 93615023 93615047 -46701718 + AT_rich Low_complexity Low_complexity 1 24 0 476 79 0 0 chr10 93615050 93615113 -46701652 + Alu SINE Alu 1 63 -247 231 137 0 55 chr10 93615113 93615186 -46701579 + (TA)n Simple_repeat Simple_repeat 2 70 0 909 135 15 0 chr10 93615275 93615408 -46701357 + AluJb SINE Alu 1 135 -177 1730 96 4 13 chr10 93615408 93615638 -46701127 + AluSx SINE Alu 2 229 -83 2301 75 4 0 chr10 93616084 93616400 -46700365 - AluSc SINE Alu 0 319 3 388 248 40 27 chr10 93616464 93616613 -46700152 + L1MB1 LINE L1 5529 5679 -442 2145 113 3 0 chr10 93617174 93617458 -46699307 - AluSg SINE Alu -25 285 1 23 0 0 0 chr10 93618239 93618262 -46698503 + AT_rich Low_complexity Low_complexity 1 23 0 830 328 41 32 chr10 93618399 93618860 -46697905 - MLT1J LTR MaLR -45 466 2 436 322 51 6 chr10 93618953 93619130 -46697635 + MIR SINE MIR 17 201 -61 437 233 34 68 chr10 93619920 93620066 -46696699 + MIR SINE MIR 57 197 -65 1665 184 33 14 chr10 93620280 93620644 -46696121 + L1MB1 LINE L1 5798 6168 0 2185 130 28 0 chr10 93620644 93620999 -46695766 + L1MB3 LINE L1 5813 6183 0 2780 149 11 7 chr10 93621325 93621780 -46694985 + MSTB2 LTR MaLR 1 457 0 22 0 0 0 chr10 93622214 93622236 -46694529 + AT_rich Low_complexity Low_complexity 1 22 0 871 294 94 71 chr10 93622521 93623101 -46693664 + L1MEd LINE L1 54 654 -5465 7779 153 22 1 chr10 93623101 93624218 -46692547 + L1PA10 LINE L1 4054 5221 -947 207 0 0 0 chr10 93624218 93624241 -46692524 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7779 153 22 1 chr10 93624241 93625206 -46691559 + L1PA10 LINE L1 5221 6164 -4 871 294 94 71 chr10 93625206 93625326 -46691439 + L1MEd LINE L1 654 770 -5349 1402 222 126 31 chr10 93625458 93626031 -46690734 + L1MEd LINE L1 2200 2826 -3303 475 249 47 77 chr10 93626049 93626084 -46690681 + MER5B DNA MER1_type 9 44 -134 1377 234 136 58 chr10 93626084 93626121 -46690644 - MLT1F LTR MaLR -2 540 507 2302 107 0 22 chr10 93626121 93626440 -46690325 + AluSx SINE Alu 1 312 0 1377 234 136 58 chr10 93626440 93626903 -46689862 - MLT1F LTR MaLR -35 507 1 475 249 47 77 chr10 93626903 93627036 -46689729 + MER5B DNA MER1_type 44 172 -6 309 193 59 13 chr10 93627236 93627321 -46689444 + MER5B DNA MER1_type 94 175 -3 198 401 14 14 chr10 93628012 93628154 -46688611 + MIR3 SINE MIR 40 181 -27 27 0 0 0 chr10 93628512 93628539 -46688226 + AT_rich Low_complexity Low_complexity 1 27 0 313 225 155 47 chr10 93629791 93629920 -46686845 + L1ME4a LINE L1 5974 6116 -5 287 229 229 33 chr10 93629995 93630117 -46686648 + MIR SINE MIR 73 218 -44 180 324 15 15 chr10 93630342 93630410 -46686355 - MIR3 SINE MIR -21 187 120 645 216 114 13 chr10 93631636 93631863 -46684902 + MER5C DNA MER1_type 60 309 -15 268 193 145 24 chr10 93631920 93632003 -46684762 - MER103 DNA DNA -52 114 22 247 179 141 26 chr10 93632904 93632982 -46683783 + L1ME4a LINE L1 5986 6072 -49 236 254 188 29 chr10 93634157 93634295 -46682470 + L2 LINE L2 3130 3289 -24 190 301 177 18 chr10 93634711 93634824 -46681941 + MIR SINE MIR 22 152 -110 1734 269 84 54 chr10 93636398 93637686 -46679079 - L1MEc LINE L1 -2488 3727 2401 503 300 107 41 chr10 93637729 93638833 -46677932 - L1MEc LINE L1 -4147 2249 1073 7475 37 9 2 chr10 93638908 93640115 -46676650 - L1PA4 LINE L1 -4 6151 4942 1296 198 32 56 chr10 93640496 93640834 -46675931 - MER44D DNA MER2_type 0 609 10 949 293 80 22 chr10 93641393 93642031 -46674734 - L1ME3A LINE L1 -224 5946 5260 33 43 0 0 chr10 93642228 93642275 -46674490 + AT_rich Low_complexity Low_complexity 1 47 0 1845 192 0 0 chr10 93642298 93642610 -46674155 + AluJo SINE Alu 1 312 0 22 35 0 0 chr10 93643047 93643076 -46673689 + AT_rich Low_complexity Low_complexity 1 29 0 437 253 89 27 chr10 93643417 93643563 -46673202 - L2 LINE L2 -3 3310 3156 1049 325 105 16 chr10 93643927 93644566 -46672199 - L2 LINE L2 -682 2632 1937 442 204 20 10 chr10 93645705 93645803 -46670962 + MLT1H LTR MaLR 73 171 -378 * 3633 140 24 30 chr10 93645801 93646431 -46670334 + MER73 LTR ERVL 17 642 -2 779 294 69 50 chr10 93646438 93646815 -46669950 + MLT1H LTR MaLR 166 549 0 405 0 0 0 chr10 93647030 93647075 -46669690 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 111 0 0 chr10 93647814 93647841 -46668924 + (A)n Simple_repeat Simple_repeat 1 27 0 244 197 0 30 chr10 93648314 93648380 -46668385 + A-rich Low_complexity Low_complexity 2 65 0 221 318 0 0 chr10 93648609 93648675 -46668090 - MIR SINE MIR -105 157 92 2104 86 55 7 chr10 93650506 93650796 -46665969 + AluSg SINE Alu 1 304 -6 1880 175 33 0 chr10 93650865 93651202 -46665563 - MER7A DNA MER2_type 0 346 1 22 35 0 0 chr10 93651961 93651990 -46664775 + AT_rich Low_complexity Low_complexity 1 29 0 2569 95 63 21 chr10 93652129 93652559 -46664206 + LTR7 LTR ERV1 1 448 -2 19269 107 16 14 chr10 93652561 93655544 -46661221 + HERVH LTR ERV1 1 2987 -4726 892 142 20 0 chr10 93655538 93655686 -46661079 + HERVH LTR ERV1 3140 3290 -4423 * 3343 113 4 6 chr10 93655676 93656179 -46660586 + HERVH LTR ERV1 3492 3993 -3720 4274 149 1 1 chr10 93656181 93656843 -46659922 + HERVH LTR ERV1 4488 5149 -2564 1384 110 23 14 chr10 93656840 93657059 -46659706 + HERVH LTR ERV1 5597 5817 -1896 * 2437 82 50 16 chr10 93657061 93657438 -46659327 + HERVH LTR ERV1 7324 7713 0 2558 91 58 28 chr10 93657438 93657866 -46658899 + LTR7 LTR ERV1 1 441 -9 25 65 0 0 chr10 93657942 93657988 -46658777 + AT_rich Low_complexity Low_complexity 1 46 0 927 237 90 35 chr10 93658336 93658799 -46657966 - MER114 LTR ERV 0 648 154 7072 95 17 2 chr10 93658799 93659754 -46657011 - LTR5 LTR ERVK 0 969 1 927 237 90 35 chr10 93659754 93659878 -46656887 - MER114 LTR ERV -494 154 38 2525 111 33 65 chr10 93660171 93660631 -46656134 + MER65A LTR ERV1 1 445 0 21 0 0 0 chr10 93660642 93660663 -46656102 + AT_rich Low_complexity Low_complexity 1 21 0 244 315 133 29 chr10 93660663 93660885 -46655880 - MIR SINE MIR -4 258 4 259 191 55 82 chr10 93660958 93660972 -46655793 - L1MA4A LINE L1 -13 6290 6277 854 266 11 19 chr10 93660972 93661235 -46655530 - L1PB4 LINE L1 -4 6152 5892 50 90 0 0 chr10 93661432 93661566 -46655199 + AT_rich Low_complexity Low_complexity 1 134 0 468 105 0 0 chr10 93662053 93662129 -46654636 + (TC)n Simple_repeat Simple_repeat 1 76 0 834 318 144 0 chr10 93662574 93662914 -46653851 + MLT1I LTR MaLR 12 400 -9 216 182 0 0 chr10 93664131 93664175 -46652590 + L2 LINE L2 3269 3312 -1 290 366 16 8 chr10 93664272 93664395 -46652370 - MIR SINE MIR -73 189 66 236 239 155 35 chr10 93664796 93664938 -46651827 + L1M4 LINE L1 5174 5332 -814 21 0 0 0 chr10 93664973 93664994 -46651771 + AT_rich Low_complexity Low_complexity 1 21 0 2067 125 0 13 chr10 93665139 93665452 -46651313 + AluSg SINE Alu 1 309 -1 463 331 28 0 chr10 93665460 93665638 -46651127 - LTR33 LTR ERVL -336 185 3 4904 147 43 4 chr10 93666029 93666911 -46649854 + L1PB4 LINE L1 5169 6094 -62 7202 42 12 0 chr10 93666911 93667995 -46648770 + L1PA4 LINE L1 5059 6152 -3 4904 147 43 4 chr10 93667995 93668060 -46648705 + L1PB4 LINE L1 6094 6155 -1 235 299 15 96 chr10 93668475 93668672 -46648093 - L2 LINE L2 -50 3263 3083 603 310 71 35 chr10 93669236 93669575 -46647190 - HAL1b LINE L1 -954 394 44 23 78 0 0 chr10 93669634 93669685 -46647080 + AT_rich Low_complexity Low_complexity 1 51 0 2300 67 0 0 chr10 93669696 93670020 -46646745 - AluY SINE Alu 0 324 1 217 343 0 27 chr10 93671857 93671930 -46644835 - L3 LINE CR1 -1322 255 185 267 305 90 17 chr10 93672148 93672325 -46644440 + L2 LINE L2 654 843 -2471 1788 118 4 0 chr10 93672833 93673078 -46643687 - AluSx SINE Alu -64 248 3 21 36 0 0 chr10 93673140 93673168 -46643597 + AT_rich Low_complexity Low_complexity 1 28 0 195 372 11 21 chr10 93673198 93673292 -46643473 + L2 LINE L2 3163 3255 -17 188 260 100 0 chr10 93673336 93673386 -46643379 - MER5A DNA MER1_type -1 188 134 239 310 56 0 chr10 93673549 93673620 -46643145 - MIR SINE MIR 0 262 188 23 0 0 0 chr10 93674165 93674188 -46642577 + AT_rich Low_complexity Low_complexity 1 23 0 299 242 118 73 chr10 93674462 93674640 -46642125 + MIR SINE MIR 2 187 -75 246 243 9 117 chr10 93675236 93675347 -46641418 - MIR SINE MIR -50 212 114 693 307 117 15 chr10 93675356 93675698 -46641067 - MLT1I LTR MaLR -17 392 16 2018 301 42 45 chr10 93675854 93676760 -46640005 - L2 LINE L2 -2409 905 3 259 219 110 0 chr10 93676837 93676910 -46639855 + L2 LINE L2 3186 3266 -6 212 365 32 0 chr10 93677500 93677563 -46639202 + L3 LINE CR1 1491 1555 -22 655 186 70 64 chr10 93677643 93677815 -46638950 + MLT1B LTR MaLR 1 173 -217 1237 162 0 25 chr10 93677816 93678051 -46638714 - L1 LINE L1 -857 5289 5061 824 114 27 67 chr10 93678068 93678217 -46638548 - FRAM SINE Alu -14 162 20 1448 152 40 40 chr10 93678267 93678589 -46638176 + L1MA9 LINE L1 5986 6307 -5 486 220 147 13 chr10 93678610 93678765 -46638000 + MLT1B LTR MaLR 156 372 -18 22 35 0 0 chr10 93678888 93678917 -46637848 + AT_rich Low_complexity Low_complexity 1 29 0 413 300 82 36 chr10 93680001 93680221 -46636544 + MIR SINE MIR 31 260 -2 310 373 127 54 chr10 93680991 93681361 -46635404 + L2 LINE L2 2860 3256 -16 276 77 0 0 chr10 93681362 93681401 -46635364 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 418 252 0 91 chr10 93681734 93681877 -46634888 - MIR SINE MIR -92 170 41 1625 192 11 0 chr10 93682398 93682674 -46634091 + AluJo SINE Alu 1 279 -33 282 156 0 0 chr10 93682802 93682847 -46633918 - MSTD LTR MaLR -1 364 320 730 195 23 0 chr10 93682851 93682979 -46633786 - FLAM_C SINE Alu -10 133 3 815 200 138 115 chr10 93682982 93683205 -46633560 - MSTD LTR MaLR -43 353 117 2051 123 0 3 chr10 93683205 93683518 -46633247 + AluSx SINE Alu 1 312 0 815 200 138 115 chr10 93683518 93683633 -46633132 - MSTD LTR MaLR -279 117 6 2320 100 0 0 chr10 93687728 93688029 -46628736 + AluSc SINE Alu 1 301 -8 191 364 101 0 chr10 93688826 93688925 -46627840 - MIR SINE MIR -55 153 45 2898 9 0 0 chr10 93688988 93689304 -46627461 - AluYb8 SINE Alu -2 316 1 3789 140 18 28 chr10 93690357 93691080 -46625685 - L1MA8 LINE L1 0 6291 5576 7152 50 5 1 chr10 93691892 93693136 -46623629 + L1PA6 LINE L1 4906 6152 -2 414 241 18 42 chr10 93693413 93693542 -46623223 - MER5A DNA MER1_type 0 178 51 236 318 20 60 chr10 93693434 93693585 -46623180 + MER5A DNA MER1_type 35 179 -10 * 348 200 160 10 chr10 93693684 93693784 -46622981 - L2 LINE L2 -2 3311 3197 298 243 180 9 chr10 93694305 93694416 -46622349 + LTR67 LTR ERVL 427 556 -1 495 363 58 0 chr10 93695517 93695707 -46621058 + ERVL LTR ERVL 1960 2160 -3604 483 179 0 0 chr10 93695711 93695795 -46620970 - MLT1A1 LTR MaLR 0 365 282 1748 151 7 11 chr10 93695923 93696208 -46620557 - MLT1A1 LTR MaLR -81 284 1 532 314 155 29 chr10 93696211 93696625 -46620140 + ERVL LTR ERVL 2164 2629 -3135 1066 320 101 23 chr10 93696801 93697485 -46619280 + ERVL LTR ERVL 2827 3563 -2201 517 216 23 31 chr10 93697608 93697742 -46619023 - MER69A DNA AcHobo -45 132 1 979 263 110 9 chr10 93697879 93698198 -46618567 + ERVL LTR ERVL 4008 4358 -1406 264 257 0 40 chr10 93698556 93698630 -46618135 + Tigger5 DNA MER2_type 2246 2316 -7 470 227 0 0 chr10 93698654 93698742 -46618023 - Tigger5 DNA MER2_type -2235 88 1 392 195 23 23 chr10 93698753 93698840 -46617925 + Tigger5 DNA MER2_type 2237 2323 0 321 187 0 0 chr10 93698847 93698922 -46617843 + GA-rich Low_complexity Low_complexity 2 76 0 1897 231 74 35 chr10 93700847 93701331 -46615434 - MLT1E LTR MaLR -90 503 1 272 235 157 9 chr10 93702411 93702526 -46614239 - MIR SINE MIR -12 250 119 186 354 10 31 chr10 93702570 93702666 -46614099 - MIR SINE MIR -155 107 14 2112 122 10 0 chr10 93703128 93703515 -46613250 + AluSx SINE Alu 1 390 0 397 305 69 65 chr10 93703619 93703881 -46612884 - L2 LINE L2 -43 3270 3008 * 557 348 95 42 chr10 93703876 93704745 -46612020 + L2 LINE L2 2353 3262 -10 354 305 8 23 chr10 93704750 93704881 -46611884 + GA-rich Low_complexity Low_complexity 3 131 0 660 242 115 0 chr10 93704955 93705137 -46611628 + MER3 DNA MER1_type 1 203 -6 1506 179 9 80 chr10 93705909 93706234 -46610531 - AluJo SINE Alu -10 302 1 249 57 0 0 chr10 93707434 93707469 -46609296 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr10 93707959 93707987 -46608778 + AT_rich Low_complexity Low_complexity 1 28 0 236 281 134 37 chr10 93708477 93708641 -46608124 - L2 LINE L2 -5 3308 3129 1696 167 27 24 chr10 93709100 93709429 -46607336 - MER2 DNA MER2_type -12 333 4 23 33 0 0 chr10 93709499 93709529 -46607236 + AT_rich Low_complexity Low_complexity 1 30 0 709 297 172 24 chr10 93710196 93710743 -46606022 + L2 LINE L2 2680 3309 -4 198 0 0 0 chr10 93711272 93711294 -46605471 + (TTG)n Simple_repeat Simple_repeat 3 24 0 248 167 0 0 chr10 93712816 93712852 -46603913 + LTR9 LTR ERV1 262 297 -315 3718 115 70 2 chr10 93712883 93713439 -46603326 - LTR9 LTR ERV1 -18 594 1 180 229 0 42 chr10 93713439 93713487 -46603278 + MIR SINE MIR 97 142 -120 2315 141 26 8 chr10 93713896 93714279 -46602486 + MLT1B LTR MaLR 1 390 0 513 272 107 0 chr10 93715386 93715555 -46601210 + MIR SINE MIR 76 262 0 354 295 67 0 chr10 93716006 93716111 -46600654 - MER5A DNA MER1_type -22 167 56 29 0 0 0 chr10 93717466 93717495 -46599270 + AT_rich Low_complexity Low_complexity 1 29 0 2101 141 93 13 chr10 93717710 93718106 -46598659 - MSTA LTR MaLR 0 428 1 1535 225 39 14 chr10 93718126 93718482 -46598283 + MLT1A1 LTR MaLR 1 365 0 501 303 66 0 chr10 93718505 93718716 -46598049 - L1ME3A LINE L1 -225 5945 5721 325 221 58 29 chr10 93718938 93719042 -46597723 + MLT1L LTR MaLR 495 601 -14 26 0 0 0 chr10 93719345 93719371 -46597394 + AT_rich Low_complexity Low_complexity 1 26 0 379 263 84 0 chr10 93719955 93720088 -46596677 + MLT1J1 LTR MaLR 40 182 -227 275 254 30 0 chr10 93720236 93720303 -46596462 + MLT1I LTR MaLR 341 409 0 22 0 0 0 chr10 93720989 93721011 -46595754 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr10 93721148 93721190 -46595575 + AT_rich Low_complexity Low_complexity 1 42 0 1630 197 7 0 chr10 93721190 93721479 -46595286 - AluJo SINE Alu -21 291 1 794 270 15 0 chr10 93721757 93721953 -46594812 + Charlie1a DNA MER1_type 1 199 -1256 328 189 252 49 chr10 93722290 93722433 -46594332 - MER58B DNA MER1_type -1 340 169 3059 199 58 110 chr10 93722445 93723528 -46593237 + Charlie1a DNA MER1_type 188 1214 -241 28836 70 7 6 chr10 93723531 93728206 -46588559 - L1PA6 LINE L1 -11 6143 1462 1742 194 16 47 chr10 93728522 93728908 -46587857 - MLT1A2 LTR MaLR 0 374 1 21 0 0 0 chr10 93729250 93729271 -46587494 + AT_rich Low_complexity Low_complexity 1 21 0 533 108 0 0 chr10 93729271 93729354 -46587411 - L1MA7 LINE L1 -6 6285 6203 223 304 0 0 chr10 93729897 93729953 -46586812 + GA-rich Low_complexity Low_complexity 4 59 0 705 231 89 59 chr10 93730712 93731036 -46585729 - MER46C DNA MER2_type 0 338 5 224 216 0 0 chr10 93731038 93731075 -46585690 - MIR SINE MIR -148 114 78 228 275 154 0 chr10 93731475 93731566 -46585199 - L2 LINE L2 -4 3309 3205 * 670 271 16 26 chr10 93731540 93731732 -46585033 + MIR SINE MIR 41 230 -32 181 295 95 86 chr10 93731939 93732044 -46584721 + MIR SINE MIR 38 143 -65 423 354 74 50 chr10 93733056 93733395 -46583370 + L2 LINE L2 2926 3272 0 556 300 43 51 chr10 93734433 93734686 -46582079 - MIR SINE MIR -10 252 2 233 225 50 12 chr10 93734686 93734766 -46581999 + L1M3 LINE L1 5348 5430 -750 305 331 79 8 chr10 93735030 93735157 -46581608 + L1ME LINE L1 5610 5745 -376 55 56 0 0 chr10 93735393 93735483 -46581282 + AT_rich Low_complexity Low_complexity 1 90 0 440 302 47 29 chr10 93736021 93736193 -46580572 + MIR SINE MIR 40 214 -48 1093 225 201 15 chr10 93737737 93738071 -46578694 - MSTD LTR MaLR 0 396 1 347 0 23 0 chr10 93738763 93738806 -46577959 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 22 0 0 0 chr10 93738866 93738888 -46577877 + AT_rich Low_complexity Low_complexity 1 22 0 229 261 11 22 chr10 93739063 93739155 -46577610 + L1ME LINE L1 5592 5682 -439 200 285 111 49 chr10 93739965 93740109 -46576656 - L2 LINE L2 -6 3307 3155 252 303 114 30 chr10 93740225 93740357 -46576408 + MIR SINE MIR 32 174 -88 1678 127 79 14 chr10 93740613 93740905 -46575860 + MER4B LTR ERV1 1 311 -299 7773 164 31 24 chr10 93741354 93742846 -46573919 - L1P LINE L1 -4634 1512 11 941 191 21 17 chr10 93742875 93743110 -46573655 + Charlie1 DNA MER1_type 2526 2761 0 334 281 0 94 chr10 93743110 93743236 -46573529 - MLT1L LTR MaLR -460 155 42 1951 176 85 15 chr10 93745584 93745982 -46570783 - MSTB LTR MaLR 0 426 1 216 278 226 17 chr10 93746221 93746336 -46570429 + MIR SINE MIR 61 199 -63 25 0 0 0 chr10 93746419 93746444 -46570321 + AT_rich Low_complexity Low_complexity 1 25 0 1982 140 78 13 chr10 93746569 93746954 -46569811 - Tigger3b DNA MER2_type -654 577 168 233 30 30 0 chr10 93746954 93746987 -46569778 - MER4E LTR ERV1 0 779 746 989 212 23 9 chr10 93747087 93747304 -46569461 + MER58A DNA MER1_type 5 224 0 561 295 81 19 chr10 93747841 93748051 -46568714 + MIR SINE MIR 11 233 -29 231 114 0 0 chr10 93748691 93748726 -46568039 + (GA)n Simple_repeat Simple_repeat 2 36 0 2550 36 7 3 chr10 93749093 93749398 -46567367 - AluY SINE Alu -5 306 1 1235 244 143 73 chr10 93751129 93751633 -46565132 + MLT1F1 LTR MaLR 4 567 0 348 274 44 30 chr10 93751634 93751769 -46564996 + MER117 DNA MER1_type 45 181 -16 249 33 0 0 chr10 93753216 93753246 -46563519 + (CA)n Simple_repeat Simple_repeat 1 30 0 600 229 0 0 chr10 93754304 93754413 -46562352 + FLAM_A SINE Alu 1 109 -33 195 42 0 0 chr10 93754417 93754441 -46562324 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 215 341 24 8 chr10 93754647 93754773 -46561992 + L2 LINE L2 2454 2581 -733 3015 144 19 150 chr10 93754795 93755570 -46561195 - L1 LINE L1 -1254 4892 4255 2177 129 7 0 chr10 93755570 93755880 -46560885 + AluSx SINE Alu 1 312 0 3015 144 19 150 chr10 93755880 93756025 -46560740 - L1 LINE L1 -1891 4255 4093 2212 197 50 13 chr10 93756024 93756558 -46560207 + L1 LINE L1 2698 3258 -2888 * 2841 81 93 0 chr10 93756558 93756968 -46559797 - LTR7 LTR ERV1 -2 448 1 2212 197 50 13 chr10 93756968 93757032 -46559733 + L1 LINE L1 3258 3318 -2828 369 0 0 0 chr10 93757285 93757326 -46559439 + (TG)n Simple_repeat Simple_repeat 1 41 0 386 356 21 37 chr10 93758309 93758500 -46558265 - MER5A DNA MER1_type 0 189 2 192 349 151 0 chr10 93758724 93758830 -46557935 - L2 LINE L2 -5 3308 3187 1068 330 37 36 chr10 93758977 93759675 -46557090 - L2 LINE L2 0 3313 2606 885 175 110 51 chr10 93760164 93760519 -46556246 - L1MDa LINE L1 -3996 2544 2169 950 191 16 45 chr10 93760523 93760687 -46556078 + L1M2 LINE L1 2431 2587 -4262 4470 79 112 0 chr10 93760687 93761306 -46555459 - LTR12 LTR ERV1 0 688 1 950 191 16 45 chr10 93761306 93761387 -46555378 + L1M2 LINE L1 2587 2669 -4180 3387 233 33 23 chr10 93761392 93762773 -46553992 + L1M1 LINE L1 3152 4577 -2988 379 132 44 15 chr10 93762851 93762919 -46553846 + MER61A-int LTR ERV1 631 700 -4517 17138 108 22 18 chr10 93762959 93766097 -46550668 + MER61A-int LTR ERV1 1320 4632 -585 1841 74 60 32 chr10 93766092 93766375 -46550390 + MER61A-int LTR ERV1 4927 5217 0 * 1476 148 158 26 chr10 93766375 93766678 -46550087 + MER61A LTR ERV1 1 343 0 520 258 16 0 chr10 93766728 93766856 -46549909 + L1MD2 LINE L1 6194 6323 -36 2193 70 3 0 chr10 93766862 93767149 -46549616 - L1PA5 LINE L1 0 6154 5867 182 259 0 17 chr10 93767370 93767428 -46549337 + MIR SINE MIR 160 216 -46 735 199 20 7 chr10 93767446 93767597 -46549168 - MER58A DNA MER1_type -9 215 63 901 218 6 0 chr10 93767598 93767768 -46548997 + Tigger3b DNA MER2_type 1 171 -1060 3300 89 51 118 chr10 93767768 93768475 -46548290 + MER4A LTR ERV1 1 779 0 5591 131 54 32 chr10 93768475 93768873 -46547892 + Tigger3b DNA MER2_type 168 556 -2472 2005 142 0 0 chr10 93768873 93769161 -46547604 - AluSx SINE Alu -24 288 1 5591 131 54 32 chr10 93769161 93769803 -46546962 + Tigger3b DNA MER2_type 556 1231 0 232 339 18 0 chr10 93769807 93769863 -46546902 - MER58A DNA MER1_type -167 57 1 267 320 131 7 chr10 93769907 93770060 -46546705 + MIR3 SINE MIR 36 207 -1 26 0 0 0 chr10 93770601 93770627 -46546138 + AT_rich Low_complexity Low_complexity 1 26 0 325 346 45 23 chr10 93771020 93771153 -46545612 - MIR3 SINE MIR -67 141 6 233 352 181 11 chr10 93771443 93771713 -46545052 - L2 LINE L2 0 3272 2957 206 331 23 39 chr10 93771869 93771999 -46544766 + L2 LINE L2 2213 2340 -974 225 0 0 0 chr10 93772284 93772309 -46544456 + (TG)n Simple_repeat Simple_repeat 2 26 0 381 22 0 0 chr10 93772444 93772490 -46544275 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 14962 53 2 1 chr10 93772490 93775141 -46541624 - L1PA5 LINE L1 -16 6138 3480 546 348 112 41 chr10 93775927 93776032 -46540733 + L2 LINE L2 2185 2281 -1033 2231 82 0 7 chr10 93776032 93776336 -46540429 - AluY SINE Alu 0 302 1 546 348 112 41 chr10 93776336 93776963 -46539802 + L2 LINE L2 2281 2971 -343 40 0 0 0 chr10 93777074 93777114 -46539651 + AT_rich Low_complexity Low_complexity 1 40 0 278 252 157 35 chr10 93778314 93778429 -46538336 - MIR3 SINE MIR -46 162 34 784 228 139 0 chr10 93778451 93778653 -46538112 + MIR SINE MIR 22 251 -11 2153 149 112 31 chr10 93778744 93779199 -46537566 - MLT1D LTR MaLR -13 492 1 261 0 0 0 chr10 93779329 93779358 -46537407 + (TG)n Simple_repeat Simple_repeat 2 30 0 8162 140 8 7 chr10 93780058 93780529 -46536236 - HSMAR2 DNA Mariner 0 1302 833 2492 117 8 13 chr10 93780529 93780906 -46535859 + THE1C LTR MaLR 1 375 0 8162 140 8 7 chr10 93780906 93781732 -46535033 - HSMAR2 DNA Mariner -469 833 3 2321 210 38 13 chr10 93782368 93782845 -46533920 - MLT1D LTR MaLR -8 497 9 290 286 9 57 chr10 93782907 93783012 -46533753 - MER102a DNA MER1_type -9 321 222 278 197 15 15 chr10 93784070 93784136 -46532629 + CT-rich Low_complexity Low_complexity 1 66 0 273 29 0 0 chr10 93784144 93784178 -46532587 + (TG)n Simple_repeat Simple_repeat 1 34 0 186 219 0 0 chr10 93784178 93784242 -46532523 + GA-rich Low_complexity Low_complexity 1 64 0 234 207 0 0 chr10 93784727 93784785 -46531980 + CT-rich Low_complexity Low_complexity 1 58 0 207 190 52 0 chr10 93785382 93785440 -46531325 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 306 0 0 0 chr10 93786588 93786622 -46530143 + (TA)n Simple_repeat Simple_repeat 1 34 0 195 222 0 0 chr10 93786734 93786779 -46529986 + (TA)n Simple_repeat Simple_repeat 1 45 0 230 130 0 0 chr10 93786785 93786831 -46529934 + LTR66 LTR ERVL 394 439 -171 * 2729 169 31 38 chr10 93786823 93787254 -46529511 + MER21B LTR ERV1 13 458 -405 1677 148 64 3 chr10 93787254 93787537 -46529228 - AluSg SINE Alu -10 300 1 2729 169 31 38 chr10 93787537 93787900 -46528865 + MER21B LTR ERV1 458 822 -41 25 0 0 0 chr10 93788777 93788802 -46527963 + AT_rich Low_complexity Low_complexity 1 25 0 203 327 36 107 chr10 93788813 93789149 -46527616 - L2 LINE L2 -51 3221 2910 539 269 41 0 chr10 93789562 93789733 -46527032 + MIR SINE MIR 12 189 -73 323 178 47 9 chr10 93789781 93789888 -46526877 + (TA)n Simple_repeat Simple_repeat 2 112 0 28 48 0 0 chr10 93790553 93790595 -46526170 + AT_rich Low_complexity Low_complexity 1 42 0 10894 209 29 15 chr10 93790800 93792929 -46523836 + L1MA4A LINE L1 2 2159 -4690 2188 184 37 39 chr10 93793078 93793948 -46522817 + L1MA4A LINE L1 2518 3385 -3463 * 5274 178 29 5 chr10 93793947 93795034 -46521731 + L1MA4A LINE L1 3777 4889 -1959 2088 183 58 22 chr10 93795047 93795458 -46521307 + MSTB LTR MaLR 1 426 0 2598 169 17 4 chr10 93795520 93795986 -46520779 + L1MA4A LINE L1 6478 6949 -56 988 109 26 6 chr10 93796041 93796197 -46520568 - L1PA13 LINE L1 -13 6150 5992 35 24 0 0 chr10 93796276 93796318 -46520447 + AT_rich Low_complexity Low_complexity 1 42 0 267 75 30 90 chr10 93796324 93796391 -46520374 - L1MA4A LINE L1 -6 6297 6235 5827 112 23 3 chr10 93796461 93797562 -46519203 - L1PA13 LINE L1 0 6163 5047 383 302 22 35 chr10 93797583 93797815 -46518950 + L1MEc LINE L1 1439 1667 -4729 444 289 18 3 chr10 93797989 93798207 -46518558 - L1MEc LINE L1 -1019 1471 1195 2965 237 42 15 chr10 93798241 93799088 -46517677 + L1ME1 LINE L1 5241 6102 -64 449 314 38 4 chr10 93800018 93800279 -46516486 - L1MEc LINE L1 -4954 1165 896 21 36 0 0 chr10 93800776 93800804 -46515961 + AT_rich Low_complexity Low_complexity 1 28 0 213 65 0 0 chr10 93800948 93800979 -46515786 + (CA)n Simple_repeat Simple_repeat 2 32 0 227 250 40 13 chr10 93802077 93802153 -46514612 - LTR33A LTR ERVL -2 521 444 223 222 0 28 chr10 93802635 93802707 -46514058 + (TA)n Simple_repeat Simple_repeat 1 70 0 29 84 0 0 chr10 93803018 93803089 -46513676 + AT_rich Low_complexity Low_complexity 1 71 0 217 197 26 0 chr10 93803267 93803343 -46513422 + (TA)n Simple_repeat Simple_repeat 2 79 0 2250 116 0 0 chr10 93803410 93803711 -46513054 - AluSx SINE Alu -11 301 1 843 321 58 18 chr10 93803921 93804367 -46512398 - LTR16B LTR ERVL 0 464 1 311 256 23 0 chr10 93804658 93804744 -46512021 + MLT1C LTR MaLR 3 90 -377 659 323 45 17 chr10 93805032 93805382 -46511383 + LTR16A LTR ERVL 43 400 -50 25 51 0 0 chr10 93805469 93805508 -46511257 + AT_rich Low_complexity Low_complexity 1 39 0 5331 238 69 18 chr10 93807442 93808864 -46507901 + L1MA5 LINE L1 805 2299 -4490 1085 145 16 11 chr10 93808932 93809118 -46507647 - MER57A LTR ERV1 0 403 217 486 114 0 0 chr10 93809118 93809188 -46507577 + L1PA16 LINE L1 23 92 -6757 9484 212 23 9 chr10 93809242 93810648 -46506117 + L1PA16 LINE L1 2794 4178 -2691 191 36 36 0 chr10 93810648 93810676 -46506089 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 9484 212 23 9 chr10 93810676 93813288 -46503477 + L1PA16 LINE L1 4178 6869 0 * 13738 188 31 11 chr10 93813281 93817846 -46498919 + L1MA5 LINE L1 2285 6942 0 204 331 117 0 chr10 93817987 93818132 -46498633 + L2 LINE L2 2821 2982 -290 185 266 71 71 chr10 93818156 93818269 -46498496 + MIR SINE MIR 10 122 -140 1844 231 52 82 chr10 93818542 93819175 -46497590 - MER90 LTR ERV1 0 614 1 772 293 97 19 chr10 93819875 93820406 -46496359 - L1ME3A LINE L1 -221 6018 5443 317 252 66 33 chr10 93820406 93820557 -46496208 - L1ME3A LINE L1 -936 5492 5337 823 275 49 63 chr10 93820668 93821224 -46495541 - MLT1G1 LTR MaLR 0 555 1 21 0 0 0 chr10 93821516 93821537 -46495228 + AT_rich Low_complexity Low_complexity 1 21 0 283 326 44 15 chr10 93821569 93821704 -46495061 - L1ME3A LINE L1 -1938 4277 4139 963 255 11 23 chr10 93821741 93822004 -46494761 + L1M4 LINE L1 8 267 -6275 1546 341 32 45 chr10 93822072 93823038 -46493727 - L1ME3A LINE L1 -2730 3485 2532 676 313 63 11 chr10 93823163 93823604 -46493161 - L1ME3A LINE L1 -4596 1800 1337 2941 171 2 36 chr10 93823630 93824214 -46492551 + L1MA10 LINE L1 5770 6333 -1 2278 119 0 0 chr10 93824223 93824535 -46492230 + AluSq SINE Alu 1 312 -1 855 225 104 9 chr10 93824566 93824797 -46491968 + MLT1D LTR MaLR 253 505 0 300 340 147 38 chr10 93826545 93826892 -46489873 - MLT1K LTR MaLR -162 426 42 541 283 78 33 chr10 93828425 93828531 -46488234 + HAL1b LINE L1 935 1035 -313 2202 112 0 0 chr10 93828531 93828827 -46487938 + AluSx SINE Alu 1 296 -16 541 283 78 33 chr10 93828827 93829116 -46487649 + HAL1b LINE L1 1035 1348 0 361 266 78 62 chr10 93830001 93830245 -46486520 - L1ME LINE L1 -387 5734 5487 243 309 89 31 chr10 93830538 93830829 -46485936 - L1ME LINE L1 -2045 4101 3794 27 0 0 0 chr10 93830912 93830939 -46485826 + AT_rich Low_complexity Low_complexity 1 27 0 4511 173 52 22 chr10 93831300 93832173 -46484592 - MER54A LTR ERVL 0 901 3 512 309 119 17 chr10 93832318 93832554 -46484211 + MIR SINE MIR 3 262 0 360 303 230 11 chr10 93833204 93833583 -46483182 - L1ME LINE L1 -2695 3451 2990 1301 26 0 0 chr10 93833794 93833948 -46482817 + L1PA5 LINE L1 5997 6150 -4 204 316 61 18 chr10 93834295 93834409 -46482356 + L3 LINE CR1 377 495 -1082 214 295 0 0 chr10 93834691 93834752 -46482013 - MIR SINE MIR -35 227 167 1009 290 114 51 chr10 93834755 93836084 -46480681 + L1MEd LINE L1 6 1462 -4848 397 322 8 8 chr10 93836085 93836206 -46480559 - MIR SINE MIR -128 134 14 21 57 0 0 chr10 93836678 93836713 -46480052 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr10 93837063 93837103 -46479662 + AT_rich Low_complexity Low_complexity 1 40 0 358 232 225 14 chr10 93837232 93837374 -46479391 + MIR SINE MIR 33 204 -58 308 311 66 26 chr10 93838180 93838331 -46478434 - MIR SINE MIR -14 248 92 191 364 125 0 chr10 93838370 93838458 -46478307 - L2 LINE L2 -47 3225 3127 215 305 17 85 chr10 93839392 93839510 -46477255 + L2 LINE L2 3139 3248 -24 1222 298 66 17 chr10 93839678 93840413 -46476352 + L2 LINE L2 2486 3262 -51 1985 152 7 0 chr10 93840472 93840761 -46476004 + AluSx SINE Alu 4 294 -18 660 294 20 48 chr10 93840947 93841195 -46475570 + MIR SINE MIR 11 251 -11 360 306 100 17 chr10 93841607 93841787 -46474978 - MER117 DNA MER1_type -1 196 2 440 287 59 37 chr10 93842166 93842302 -46474463 - MIR3 SINE MIR -67 141 3 374 314 139 18 chr10 93842696 93842919 -46473846 + MIR SINE MIR 13 262 0 371 314 38 45 chr10 93842938 93843139 -46473626 + MIR SINE MIR 26 222 -40 554 340 126 34 chr10 93843327 93844090 -46472675 - L2 LINE L2 -5 3267 2418 191 368 95 0 chr10 93844120 93844215 -46472550 - L2 LINE L2 -965 2349 2246 1957 161 0 0 chr10 93845132 93845430 -46471335 + AluSx SINE Alu 1 298 -14 664 269 18 12 chr10 93845581 93845752 -46471013 + MER5B DNA MER1_type 7 178 0 2524 103 17 3 chr10 93845773 93846132 -46470633 - THE1B LTR MaLR 0 364 1 329 332 37 37 chr10 93850612 93850856 -46465909 - L2 LINE L2 -245 3068 2825 221 269 77 13 chr10 93851174 93851252 -46465513 - MIR SINE MIR -2 260 178 182 373 0 13 chr10 93851671 93851746 -46465019 + L2 LINE L2 2644 2717 -597 28 0 0 0 chr10 93851764 93851792 -46464973 + AT_rich Low_complexity Low_complexity 1 28 0 1815 138 83 29 chr10 93852264 93852576 -46464189 + THE1B LTR MaLR 1 329 -35 5950 75 9 1 chr10 93852576 93853344 -46463421 + THE1B-int LTR MaLR 807 1580 0 2199 119 73 15 chr10 93853344 93853687 -46463078 + THE1B LTR MaLR 1 363 -1 210 302 23 23 chr10 93855822 93855908 -46460857 + MIR SINE MIR 171 256 -6 219 345 9 26 chr10 93855939 93856055 -46460710 + L2 LINE L2 2937 3050 -222 21 0 0 0 chr10 93856108 93856129 -46460636 + AT_rich Low_complexity Low_complexity 1 21 0 205 343 14 14 chr10 93856205 93856275 -46460490 - MIR SINE MIR -186 76 7 1937 89 183 113 chr10 93856610 93856650 -46460115 - MLT2A1 LTR ERVL 0 444 408 459 0 0 0 chr10 93856650 93856701 -46460064 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1937 89 183 113 chr10 93856701 93857075 -46459690 - MLT2A1 LTR ERVL -36 408 1 43950 75 5 1 chr10 93857075 93862709 -46454056 - HERVL-A1-A1 LTR ERVL 0 5654 1 3096 81 33 5 chr10 93862715 93863137 -46453628 - MLT2A1 LTR ERVL -10 434 1 514 316 89 77 chr10 93863320 93863735 -46453030 + L3 LINE CR1 941 1360 -217 207 0 0 0 chr10 93864261 93864284 -46452481 + (TG)n Simple_repeat Simple_repeat 1 23 0 627 296 46 42 chr10 93864503 93864763 -46452002 + MIR SINE MIR 2 262 0 265 152 0 22 chr10 93866059 93866105 -46450660 + L2 LINE L2 3265 3309 -4 710 198 66 24 chr10 93866575 93866742 -46450023 + MER5B DNA MER1_type 5 178 0 1777 142 7 7 chr10 93866919 93867193 -46449572 + AluSg SINE Alu 2 275 -35 539 308 35 25 chr10 93867776 93867974 -46448791 + MIR SINE MIR 6 205 -57 1537 201 7 14 chr10 93868363 93868656 -46448109 - AluJo SINE Alu -21 291 1 627 209 115 6 chr10 93869239 93869421 -46447344 + MER51D LTR ERV1 456 657 0 * 2308 111 26 92 chr10 93869421 93869875 -46446890 - MER65A LTR ERV1 -21 424 1 314 250 147 60 chr10 93870198 93870314 -46446451 - MIR SINE MIR -12 250 125 926 161 98 0 chr10 93870322 93870496 -46446269 - L1P4 LINE L1 -395 5771 5581 204 289 60 36 chr10 93870503 93870586 -46446179 - MIR SINE MIR -123 139 55 32 57 0 0 chr10 93870855 93870908 -46445857 + AT_rich Low_complexity Low_complexity 1 53 0 1960 225 73 6 chr10 93870928 93871394 -46445371 - MLT1D LTR MaLR -8 497 1 22 35 0 0 chr10 93871427 93871456 -46445309 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 93872410 93872432 -46444333 + AT_rich Low_complexity Low_complexity 1 22 0 215 77 0 26 chr10 93872608 93872647 -46444118 + (CA)n Simple_repeat Simple_repeat 1 38 0 261 245 0 128 chr10 93872693 93872787 -46443978 - MER5A DNA MER1_type -77 112 31 190 269 287 28 chr10 93872801 93872909 -46443856 + MER5A DNA MER1_type 31 166 -23 21 57 0 0 chr10 93873910 93873945 -46442820 + AT_rich Low_complexity Low_complexity 1 35 0 758 102 73 29 chr10 93874159 93874296 -46442469 + L1MA9 LINE L1 6145 6287 -25 1567 204 137 20 chr10 93875024 93875476 -46441289 - MLT1D LTR MaLR 0 505 1 554 312 116 10 chr10 93875785 93876077 -46440688 - MLT1I LTR MaLR -28 381 59 229 299 46 58 chr10 93876236 93876410 -46440355 + L1MEc LINE L1 1905 2076 -4320 * 875 263 112 53 chr10 93876406 93876995 -46439770 + L1MEc LINE L1 2357 2980 -3235 2534 267 59 50 chr10 93877245 93878960 -46437805 + L1ME3 LINE L1 241 2076 -4004 1880 172 0 0 chr10 93878960 93879251 -46437514 + AluSx SINE Alu 6 296 -16 2534 267 59 50 chr10 93879251 93879668 -46437097 + L1ME3 LINE L1 2076 2488 -3592 923 197 17 6 chr10 93879669 93879847 -46436918 - AluJb SINE Alu 0 312 133 804 205 6 35 chr10 93879956 93880127 -46436638 - AluJo SINE Alu -146 166 1 1072 259 28 13 chr10 93880131 93880524 -46436241 + L1ME3 LINE L1 2492 2890 -3190 2339 155 45 65 chr10 93880528 93880993 -46435772 - MLT2C2 LTR ERVL -7 457 2 6527 235 62 17 chr10 93880994 93883055 -46433710 + L1ME3 LINE L1 2886 5062 -1041 2211 136 0 0 chr10 93883055 93883365 -46433400 + AluSx SINE Alu 3 312 0 6527 235 62 17 chr10 93883365 93883571 -46433194 + L1ME3 LINE L1 5062 5257 -846 1964 259 37 50 chr10 93883670 93884478 -46432287 + L1ME3 LINE L1 5275 6072 -24 1936 176 40 32 chr10 93884485 93885032 -46431733 - MLT2A2 LTR ERVL 0 554 1 311 210 8 48 chr10 93885300 93885424 -46431341 + (TA)n Simple_repeat Simple_repeat 2 120 0 317 260 0 144 chr10 93885755 93885901 -46430864 + MIR SINE MIR 19 143 -65 240 327 26 59 chr10 93886093 93886246 -46430519 + MIR SINE MIR 31 178 -84 2112 91 10 17 chr10 93886361 93886658 -46430107 + AluY SINE Alu 4 298 -13 365 340 131 7 chr10 93887831 93888009 -46428756 + MIR3 SINE MIR 2 197 -11 723 248 131 0 chr10 93888232 93888430 -46428335 - MER58A DNA MER1_type 0 224 1 223 327 119 20 chr10 93888585 93888686 -46428079 + MIR SINE MIR 23 133 -75 206 245 128 11 chr10 93888844 93888938 -46427827 - MIR SINE MIR -58 204 100 446 281 149 18 chr10 93889773 93889994 -46426771 + MLT1H LTR MaLR 4 253 -296 249 212 76 15 chr10 93890005 93890071 -46426694 + L1MDa LINE L1 989 1058 -5482 6162 100 10 19 chr10 93890071 93891047 -46425718 + MER11C LTR ERVK 1 1057 -14 431 55 0 0 chr10 93891086 93891141 -46425624 - HERVK11 LTR ERVK -1590 6363 6309 4647 180 59 53 chr10 93891141 93892394 -46424371 + L1MDa LINE L1 1053 2313 -4227 183 80 0 0 chr10 93892403 93892428 -46424337 + (TA)n Simple_repeat Simple_repeat 2 26 0 2940 98 5 12 chr10 93892961 93893390 -46423375 + L1PB2 LINE L1 5724 6149 -2 318 323 89 6 chr10 93894748 93894906 -46421859 + L1MC4a LINE L1 4695 4865 -1281 303 143 0 0 chr10 93894923 93894965 -46421800 + 5S rRNA rRNA 1 42 -79 358 359 44 32 chr10 93894967 93895282 -46421483 + L1MC4a LINE L1 4881 5199 -947 357 270 140 36 chr10 93895594 93895901 -46420864 + L1MC4a LINE L1 5563 5901 -1907 401 66 16 0 chr10 93897325 93897386 -46419379 + (TG)n Simple_repeat Simple_repeat 1 62 0 275 257 29 14 chr10 93898463 93898533 -46418232 - MIR3 SINE MIR -33 175 105 512 302 99 22 chr10 93899628 93899860 -46416905 + MIR SINE MIR 11 260 -2 484 283 151 10 chr10 93900570 93900775 -46415990 - MIR SINE MIR -12 250 17 253 260 14 0 chr10 93901041 93901114 -46415651 - L2 LINE L2 -5 3308 3235 809 172 12 41 chr10 93901546 93901715 -46415050 - FRAM SINE Alu -2 164 1 1088 264 4 16 chr10 93901966 93902224 -46414541 + MIR SINE MIR 8 262 0 231 88 0 0 chr10 93903222 93903256 -46413509 + (T)n Simple_repeat Simple_repeat 1 34 0 338 203 95 0 chr10 93903384 93903458 -46413307 + MIR SINE MIR 81 161 -101 1138 87 0 7 chr10 93903460 93903609 -46413156 + AluSq/x SINE Alu 1 148 -164 1645 112 0 17 chr10 93903609 93903883 -46412882 + AluSq SINE Alu 55 324 0 601 146 0 29 chr10 93904038 93904181 -46412584 + AluSp/q SINE Alu 185 324 0 362 238 10 40 chr10 93904186 93904287 -46412478 + MIR SINE MIR 165 262 0 817 175 70 6 chr10 93905597 93905768 -46410997 - MER105 DNA DNA -1 203 22 276 338 0 0 chr10 93905941 93906021 -46410744 - L2 LINE L2 -5 3267 3188 1165 124 5 26 chr10 93907034 93907227 -46409538 + L1PB2 LINE L1 5961 6149 -2 2076 217 19 10 chr10 93907293 93907703 -46409062 + MLT2C2 LTR ERVL 1 414 -50 351 60 0 0 chr10 93907738 93907788 -46408977 + (CA)n Simple_repeat Simple_repeat 1 50 0 2426 134 18 51 chr10 93907806 93908255 -46408510 + Tigger2a DNA MER2_type 1 434 0 235 179 89 0 chr10 93908264 93908320 -46408445 + MLT2C2 LTR ERVL 460 520 0 2119 112 0 0 chr10 93909527 93909804 -46406961 - AluSq SINE Alu -17 296 20 6074 180 30 15 chr10 93910736 93912942 -46403823 - L1MA5 LINE L1 0 6300 4069 9739 189 20 10 chr10 93912943 93914344 -46402421 - L1 LINE L1 -1321 5007 3575 2110 135 138 5 chr10 93914344 93914722 -46402043 + MSTA LTR MaLR 1 428 0 9739 189 20 10 chr10 93914722 93915500 -46401265 - L1 LINE L1 -2753 3575 2806 6538 183 23 38 chr10 93915498 93917623 -46399142 - L1 LINE L1 -4065 1263 10 * 17781 158 18 16 chr10 93917629 93920794 -46395971 + ERVL-B3 LTR ERVL 2575 5745 -19 3188 160 9 47 chr10 93920806 93921382 -46395383 + MLT2B3 LTR ERVL 1 554 0 2180 101 37 0 chr10 93921656 93921952 -46394813 - AluSx SINE Alu -5 307 1 342 261 33 0 chr10 93922076 93922168 -46394597 + L1MC4 LINE L1 6607 6701 -1341 1163 342 80 27 chr10 93922191 93922703 -46394062 - L2 LINE L2 -31 3241 2758 339 25 0 0 chr10 93922703 93922743 -46394022 + (TG)n Simple_repeat Simple_repeat 2 41 0 1163 342 80 27 chr10 93922743 93923229 -46393536 - L2 LINE L2 -514 2758 2197 2159 187 0 8 chr10 93923639 93924040 -46392725 - MER66B LTR ERV1 -88 398 1 28 29 0 0 chr10 93925147 93925182 -46391583 + AT_rich Low_complexity Low_complexity 1 35 0 2956 95 73 0 chr10 93925923 93926345 -46390420 - MLT2A2 LTR ERVL 0 453 1 21721 85 8 1 chr10 93926345 93931911 -46384854 - HERVL-A2 LTR ERVL 0 5654 1 2805 106 52 29 chr10 93931911 93932354 -46384411 - MLT2A2 LTR ERVL 0 453 1 1712 184 3 3 chr10 93932384 93932677 -46384088 - AluJb SINE Alu -19 293 1 2402 125 5 35 chr10 93933208 93933583 -46383182 + THE1B LTR MaLR 1 364 0 194 312 161 32 chr10 93933615 93933801 -46382964 + L2 LINE L2 2709 2918 -396 216 210 194 16 chr10 93934034 93934096 -46382669 + MIR3 SINE MIR 126 198 -10 189 351 0 0 chr10 93934765 93934822 -46381943 + MIR SINE MIR 71 127 -135 729 292 27 27 chr10 93935298 93935558 -46381207 + MIR SINE MIR 2 261 -1 265 292 0 49 chr10 93935597 93935741 -46381024 - MLT1J LTR MaLR -41 470 334 421 224 129 0 chr10 93935766 93935882 -46380883 - MER58B DNA MER1_type -11 330 200 454 326 61 19 chr10 93935934 93936198 -46380567 - MLT1J LTR MaLR -234 277 3 1948 182 56 8 chr10 93936206 93936601 -46380164 - MER54A LTR ERVL 0 901 488 2196 167 0 0 chr10 93936836 93937195 -46379570 - MER46B DNA MER2_type -1 235 2 1388 246 57 33 chr10 93937486 93937977 -46378788 - MLT1D LTR MaLR -2 503 1 21 0 0 0 chr10 93939042 93939063 -46377702 + AT_rich Low_complexity Low_complexity 1 21 0 311 357 0 9 chr10 93939243 93939355 -46377410 + MER5B DNA MER1_type 2 112 -66 353 320 32 16 chr10 93939383 93939508 -46377257 - L3 LINE CR1 -52 1525 1399 477 298 57 21 chr10 93940068 93940209 -46376556 - MIR3 SINE MIR -46 162 17 416 369 67 32 chr10 93940972 93941326 -46375439 - L3 LINE CR1 -1094 483 112 2480 59 0 7 chr10 93941326 93941629 -46375136 + AluY SINE Alu 1 301 -10 416 369 67 32 chr10 93941629 93941675 -46375090 - L3 LINE CR1 -1465 112 69 202 296 148 19 chr10 93941691 93941799 -46374966 - L2 LINE L2 -4 3309 3188 793 114 15 0 chr10 93942250 93942382 -46374383 + (TTTC)n Simple_repeat Simple_repeat 1 134 0 523 260 123 10 chr10 93942416 93942620 -46374145 - L2 LINE L2 -88 3225 2999 322 296 78 52 chr10 93942871 93943141 -46373624 - L1ME LINE L1 -283 5838 5562 396 267 115 47 chr10 93944176 93944376 -46372389 + MIR SINE MIR 1 208 -54 671 299 95 4 chr10 93945015 93945246 -46371519 + MIR SINE MIR 9 260 -2 293 335 18 60 chr10 93945284 93945451 -46371314 + MIR3 SINE MIR 24 183 -25 3306 157 20 75 chr10 93945607 93946338 -46370427 + LTR8 LTR ERV1 1 691 0 1743 156 34 62 chr10 93946555 93946576 -46370189 - THE1C LTR MaLR -2 373 353 2257 86 3 3 chr10 93946576 93946868 -46369897 - AluY SINE Alu -19 292 1 1743 156 34 62 chr10 93946868 93947230 -46369535 - THE1C LTR MaLR -22 353 1 285 75 0 0 chr10 93947727 93947767 -46368998 + (TG)n Simple_repeat Simple_repeat 1 40 0 738 308 40 5 chr10 93948080 93948304 -46368461 + MIR SINE MIR 29 260 -2 215 31 31 0 chr10 93948313 93948345 -46368420 + (CA)n Simple_repeat Simple_repeat 2 34 0 2113 174 100 15 chr10 93948786 93949246 -46367519 + MLT1D LTR MaLR 5 503 -2 661 265 48 26 chr10 93950136 93950366 -46366399 - MER102b DNA MER1_type -4 337 103 21 0 0 0 chr10 93950466 93950487 -46366278 + AT_rich Low_complexity Low_complexity 1 21 0 20799 165 34 18 chr10 93950617 93952344 -46364421 + L1MA3 LINE L1 1 1699 -5866 366 23 0 0 chr10 93952344 93952387 -46364378 + (GA)n Simple_repeat Simple_repeat 2 44 0 20799 165 34 18 chr10 93952387 93955658 -46361107 + L1MA3 LINE L1 1699 4916 -2649 2325 80 3 13 chr10 93955658 93955972 -46360793 + AluY SINE Alu 1 311 0 20799 165 34 18 chr10 93955972 93956065 -46360700 + L1MA3 LINE L1 4916 5006 -2559 1465 224 3 26 chr10 93956065 93956369 -46360396 + AluJo SINE Alu 1 297 -15 20799 165 34 18 chr10 93956369 93957456 -46359309 + L1MA3 LINE L1 5006 6299 -1266 4145 129 16 3 chr10 93957453 93957792 -46358973 + L1MA3 LINE L1 6870 7203 -521 * 333 0 0 0 chr10 93957792 93957829 -46358936 + (CA)n Simple_repeat Simple_repeat 2 38 0 4145 129 16 3 chr10 93957829 93958185 -46358580 + L1MA3 LINE L1 7203 7574 -150 446 157 41 83 chr10 93958172 93958293 -46358472 + L1M1 LINE L1 13 128 -7437 * 17193 174 23 10 chr10 93958289 93962995 -46353770 + L1PA13 LINE L1 2195 6954 0 27 0 0 0 chr10 93964386 93964413 -46352352 + AT_rich Low_complexity Low_complexity 1 27 0 4089 242 45 21 chr10 93964846 93964933 -46351832 - L1ME2 LINE L1 -19 6079 5996 1824 167 16 43 chr10 93964933 93965305 -46351460 - MLT1A1 LTR MaLR 0 365 4 4089 242 45 21 chr10 93965305 93966363 -46350402 - L1ME2 LINE L1 -102 5996 4965 2429 198 9 0 chr10 93966363 93966787 -46349978 + MSTB1 LTR MaLR 1 428 -4 4089 242 45 21 chr10 93966787 93967815 -46348950 - L1ME2 LINE L1 -1133 4965 3851 2116 211 20 6 chr10 93968046 93968465 -46348300 + MSTB LTR MaLR 1 428 0 6442 190 5 2 chr10 93968465 93969609 -46347156 + MSTB-int LTR MaLR 1 1148 -503 257 185 138 0 chr10 93969611 93969676 -46347089 - Tigger5 DNA MER2_type -31 2292 2219 1368 251 45 78 chr10 93969677 93970497 -46346268 - L1ME2 LINE L1 -3363 2717 1978 1421 203 25 83 chr10 93970499 93970581 -46346184 - MLT1B LTR MaLR 0 390 305 1202 75 139 0 chr10 93970581 93970726 -46346039 + MER107 DNA MER1_type 1 175 -22 293 0 0 26 chr10 93970726 93970764 -46346001 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1202 75 139 0 chr10 93970764 93970791 -46345974 + MER107 DNA MER1_type 175 197 0 1421 203 25 83 chr10 93970791 93971116 -46345649 - MLT1B LTR MaLR -85 305 7 789 262 154 63 chr10 93971122 93971679 -46345086 - L1ME2 LINE L1 -4153 1927 1332 2050 156 32 6 chr10 93971693 93972040 -46344725 - MER47A DNA MER2_type -10 356 1 326 298 45 49 chr10 93972044 93972808 -46343957 - L1ME2 LINE L1 -4758 1322 379 284 47 0 23 chr10 93972808 93972851 -46343914 + (TG)n Simple_repeat Simple_repeat 2 43 0 326 298 45 49 chr10 93972851 93973229 -46343536 - L1ME2 LINE L1 -5701 379 1 273 262 0 0 chr10 93974657 93974718 -46342047 - L2 LINE L2 0 3313 3253 385 330 57 63 chr10 93974894 93975194 -46341571 - MLT1K LTR MaLR -102 486 189 336 335 91 42 chr10 93975573 93975860 -46340905 - L2 LINE L2 0 3272 2972 1840 124 36 0 chr10 93976204 93976479 -46340286 - AluSx SINE Alu -27 285 1 22 56 0 0 chr10 93977027 93977063 -46339702 + AT_rich Low_complexity Low_complexity 1 36 0 2789 216 43 19 chr10 93977816 93978488 -46338277 + MER76 LTR ERV 1 688 0 7024 58 3 1 chr10 93978687 93979991 -46336774 + L1PA7 LINE L1 4844 6149 -5 267 267 0 0 chr10 93980064 93980124 -46336641 - MER113 DNA MER1_type? 0 521 462 234 271 12 0 chr10 93980190 93980275 -46336490 - MER113 DNA MER1_type? -405 116 31 22 0 0 0 chr10 93980654 93980676 -46336089 + AT_rich Low_complexity Low_complexity 1 22 0 419 184 10 0 chr10 93980686 93980784 -46335981 + L1MC3 LINE L1 7555 7653 -132 969 247 5 27 chr10 93980793 93981016 -46335749 + LTR52 LTR ERVL 1 218 -203 236 360 57 24 chr10 93981023 93981320 -46335445 + L1M3d LINE L1 1 307 -5584 6931 270 55 13 chr10 93981339 93984765 -46332000 + L1M3de LINE L1 3 3276 -3456 5386 259 33 20 chr10 93984771 93986862 -46329903 - L1PA12 LINE L1 -3125 4459 2353 3178 160 28 0 chr10 93986866 93987446 -46329319 + L1MA5 LINE L1 5700 6295 -5 599 256 97 10 chr10 93987446 93987563 -46329202 + LTR52 LTR ERVL 210 315 -106 384 22 0 0 chr10 93987563 93987608 -46329157 + (TG)n Simple_repeat Simple_repeat 1 45 0 599 256 97 10 chr10 93987608 93987685 -46329080 + LTR52 LTR ERVL 315 421 0 608 134 98 0 chr10 93987687 93987799 -46328966 + L1MC3 LINE L1 7663 7785 0 513 289 70 11 chr10 93988341 93988528 -46328237 - MIR SINE MIR -45 217 20 368 352 6 45 chr10 93989597 93989776 -46326989 + MIR3 SINE MIR 20 191 -17 184 358 0 0 chr10 93990606 93990687 -46326078 - MIR SINE MIR -1 261 181 1839 285 51 54 chr10 93990691 93991743 -46325022 - L2 LINE L2 0 3313 2277 444 332 47 5 chr10 93991722 93991912 -46324853 - MIR SINE MIR -49 213 16 * 1534 251 82 21 chr10 93991940 93992514 -46324251 + L1M4 LINE L1 4594 5202 -944 5217 152 39 14 chr10 93992520 93993459 -46323306 + L1PB1 LINE L1 3 965 -5898 5873 139 26 21 chr10 93993459 93994146 -46322619 + L1PB1 LINE L1 5503 6194 -673 246 32 0 0 chr10 93994146 93994177 -46322588 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 5873 139 26 21 chr10 93994177 93994852 -46321913 + L1PB1 LINE L1 6194 6864 -3 274 236 0 0 chr10 93994929 93995001 -46321764 + L1M4 LINE L1 5191 5262 -884 960 291 185 23 chr10 93995006 93995569 -46321196 - MER20B DNA MER1_type -129 654 1 216 363 20 27 chr10 93996946 93997092 -46319673 - L3 LINE CR1 -402 1175 1031 264 56 0 0 chr10 93997826 93997842 -46318923 + (T)n Simple_repeat Simple_repeat 1 16 -20 1972 127 35 0 chr10 93997842 93998126 -46318639 + AluSx SINE Alu 1 294 -18 264 56 0 0 chr10 93998126 93998145 -46318620 + (T)n Simple_repeat Simple_repeat 15 36 0 227 309 21 21 chr10 93998383 93998477 -46318288 - L1M4 LINE L1 -295 5879 5786 332 291 44 54 chr10 93998721 93998986 -46317779 - L1M4 LINE L1 -615 5547 5349 26 50 0 0 chr10 93999014 93999054 -46317711 + AT_rich Low_complexity Low_complexity 1 40 0 397 302 38 45 chr10 93999520 93999607 -46317158 - L1M4 LINE L1 -1386 4760 4674 2028 141 0 3 chr10 93999607 93999906 -46316859 - AluSx SINE Alu -14 298 1 397 302 38 45 chr10 93999906 94000106 -46316659 - L1M4 LINE L1 -1472 4674 4475 339 224 12 12 chr10 94000449 94000534 -46316231 + MLT2E LTR ERVL 109 193 -435 * 443 295 179 22 chr10 94000522 94000790 -46315975 + MLT2E LTR ERVL 319 628 0 23 68 0 0 chr10 94001302 94001346 -46315419 + AT_rich Low_complexity Low_complexity 1 44 0 313 307 69 35 chr10 94001347 94001549 -46315216 + L1ME3A LINE L1 5060 5268 -878 692 311 97 25 chr10 94001553 94002161 -46314604 + L1ME3A LINE L1 5301 5962 -208 185 296 139 17 chr10 94002532 94002647 -46314118 + L2 LINE L2 3143 3271 -1 1183 242 26 0 chr10 94002951 94003257 -46313508 + L1MC3 LINE L1 4006 4319 -1827 5230 105 8 6 chr10 94003262 94003951 -46312814 - L1PA13 LINE L1 -4 6159 5467 1457 133 0 22 chr10 94003951 94004177 -46312588 + AluSg/x SINE Alu 76 296 -14 5230 105 8 6 chr10 94004177 94004266 -46312499 - L1PA13 LINE L1 -696 5467 5380 * 5632 206 54 28 chr10 94004258 94005734 -46311031 + L1MC3 LINE L1 4307 5743 -403 2295 143 22 0 chr10 94005734 94006090 -46310675 - THE1B LTR MaLR 0 364 1 5632 206 54 28 chr10 94006090 94006652 -46310113 + L1MC3 LINE L1 5743 6289 143 1679 198 32 121 chr10 94006652 94007248 -46309517 + MER67A LTR ERV1 1 543 0 5632 206 54 28 chr10 94007248 94007290 -46309475 + L1MC3 LINE L1 6289 5133 -1013 1762 206 80 29 chr10 94007290 94007767 -46308998 + MLT1D LTR MaLR 5 505 0 5632 206 54 28 chr10 94007767 94008036 -46308729 + L1MC3 LINE L1 5132 5392 -754 3775 163 88 5 chr10 94008028 94008312 -46308453 - L1MB1 LINE L1 -55 6113 5854 * 1095 44 13 6 chr10 94008312 94008471 -46308294 + (TCTA)n Simple_repeat Simple_repeat 1 160 0 3775 163 88 5 chr10 94008471 94008939 -46307826 - L1MB1 LINE L1 -314 5854 5299 2183 210 19 28 chr10 94008940 94009482 -46307283 - L1MB1 LINE L1 -813 5333 4797 * 4295 173 39 43 chr10 94009480 94010434 -46306331 + L1MC3 LINE L1 6715 7664 -121 1334 161 84 110 chr10 94010473 94010864 -46305901 - MER31B LTR ERV1 -79 387 7 516 139 109 1 chr10 94010869 94010980 -46305785 + L1MC3 LINE L1 6204 6333 -11 2360 82 7 0 chr10 94011450 94011742 -46305023 + AluSc SINE Alu 1 294 -15 2475 59 0 0 chr10 94012281 94012571 -46304194 - AluY SINE Alu -20 291 2 506 309 149 0 chr10 94012608 94012802 -46303963 - MIR SINE MIR -11 251 29 181 325 65 13 chr10 94012847 94012924 -46303841 + MIR3 SINE MIR 116 196 -12 468 283 78 11 chr10 94013659 94013839 -46302926 + L2 LINE L2 1920 2111 -1203 1789 302 95 16 chr10 94014095 94014523 -46302242 + L2 LINE L2 2138 2531 -782 1824 183 14 30 chr10 94014523 94014894 -46301871 - MLT1A1 LTR MaLR 0 365 1 1789 302 95 16 chr10 94014894 94015451 -46301314 + L2 LINE L2 2531 3214 -99 459 281 82 6 chr10 94015449 94015620 -46301145 + MIR SINE MIR 64 247 -15 * 22 35 0 0 chr10 94017064 94017093 -46299672 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 94017710 94017732 -46299033 + AT_rich Low_complexity Low_complexity 1 22 0 868 323 149 23 chr10 94017805 94018496 -46298269 - L3 LINE CR1 -7 1570 793 801 261 70 43 chr10 94018859 94019158 -46297607 + LTR33 LTR ERVL 4 310 -211 440 382 25 0 chr10 94019719 94019876 -46296889 + MIR SINE MIR 7 167 -95 23 0 0 0 chr10 94019889 94019912 -46296853 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 94019937 94019968 -46296797 + AT_rich Low_complexity Low_complexity 1 31 0 195 244 0 0 chr10 94020656 94020697 -46296068 + MIR3 SINE MIR 164 204 -4 976 174 6 18 chr10 94020742 94020909 -46295856 - MLT1C LTR MaLR 0 467 303 1440 166 166 19 chr10 94020909 94021223 -46295542 + LTR47A LTR ERVL 1 360 -92 5767 189 42 31 chr10 94021228 94023243 -46293522 + L1PA15 LINE L1 4078 6160 -5 1497 153 0 0 chr10 94023835 94024050 -46292715 - AluJb SINE Alu -97 215 1 193 163 0 122 chr10 94024122 94024171 -46292594 - L2 LINE L2 0 3272 3230 313 289 184 51 chr10 94024590 94024668 -46292097 - L1ME4a LINE L1 -130 5991 5925 2134 127 0 0 chr10 94024668 94024960 -46291805 - AluSx SINE Alu -20 292 1 313 289 184 51 chr10 94024960 94025196 -46291569 - L1ME4a LINE L1 -196 5925 5635 311 264 104 77 chr10 94026545 94026727 -46290038 - L1ME LINE L1 -375 5746 5560 25 0 0 0 chr10 94026750 94026775 -46289990 + AT_rich Low_complexity Low_complexity 1 25 0 2808 150 55 0 chr10 94026775 94026922 -46289843 - L1MA9 LINE L1 0 6312 6175 339 25 0 0 chr10 94026922 94026962 -46289803 + (TG)n Simple_repeat Simple_repeat 1 40 0 2808 150 55 0 chr10 94026962 94027500 -46289265 - L1MA9 LINE L1 -137 6175 5442 525 217 40 66 chr10 94027500 94027698 -46289067 - LTR19C LTR ERV1 0 779 587 1899 95 4 11 chr10 94027714 94027978 -46288787 - AluY SINE Alu 0 311 50 7221 173 54 23 chr10 94028078 94029738 -46287027 - L1 LINE L1 -1579 5588 3878 1605 114 4 4 chr10 94029742 94029979 -46286786 - Tigger3(Golem) DNA MER2_type 0 3029 2793 563 264 7 0 chr10 94029987 94030127 -46286638 - Tigger3(Golem) DNA MER2_type -2887 142 2 525 153 63 0 chr10 94030128 94030239 -46286526 - L1 LINE L1 -3292 3875 3758 385 334 71 33 chr10 94030236 94030601 -46286164 - L1 LINE L1 -5287 1881 1503 * 481 264 33 8 chr10 94031827 94031948 -46284817 - L2 LINE L2 0 3313 3190 296 180 0 0 chr10 94031999 94032049 -46284716 - ERVL-B2 LTR ERVL 0 5764 5715 192 97 0 0 chr10 94032444 94032475 -46284290 + (A)n Simple_repeat Simple_repeat 1 31 0 3757 175 50 3 chr10 94032497 94033211 -46283554 - ERVL-B2 LTR ERVL -57 5707 4960 21272 156 24 34 chr10 94033315 94037797 -46278968 - ERVL-B2 LTR ERVL -1029 4735 2 864 225 55 0 chr10 94037798 94037998 -46278767 - MLT2B2 LTR ERVL 0 515 305 28 29 0 0 chr10 94038148 94038183 -46278582 + AT_rich Low_complexity Low_complexity 1 35 0 6498 87 11 1 chr10 94038786 94039862 -46276903 + L1PA8 LINE L1 5080 6164 -8 262 246 0 0 chr10 94039892 94039949 -46276816 - HAL1b LINE L1 -81 1267 1211 318 309 7 22 chr10 94039972 94040108 -46276657 + (CATATA)n Simple_repeat Simple_repeat 5 138 0 21 0 0 0 chr10 94040337 94040358 -46276407 + AT_rich Low_complexity Low_complexity 1 21 0 1863 158 46 27 chr10 94040853 94041221 -46275544 + THE1C LTR MaLR 1 375 0 610 281 162 46 chr10 94041273 94041699 -46275066 - HAL1b LINE L1 -421 927 397 2321 103 0 3 chr10 94041699 94042010 -46274755 + AluSq SINE Alu 1 310 -3 610 281 162 46 chr10 94042010 94042239 -46274526 - HAL1b LINE L1 -951 397 196 227 171 0 0 chr10 94042257 94042298 -46274467 + L2 LINE L2 3273 3313 0 374 273 79 55 chr10 94042301 94042575 -46274190 - HAL1b LINE L1 -1142 486 332 489 317 136 10 chr10 94044239 94044472 -46272293 + MIR SINE MIR 5 249 -13 496 255 196 0 chr10 94047484 94047637 -46269128 + MIR SINE MIR 18 200 -62 2592 182 171 23 chr10 94047830 94048479 -46268286 + L1MC3 LINE L1 7040 7784 -1 325 272 88 22 chr10 94050745 94050881 -46265884 + MER117 DNA MER1_type 1 145 -52 394 314 46 51 chr10 94051768 94051943 -46264822 - L2 LINE L2 -9 3263 3090 2000 133 0 33 chr10 94052136 94052436 -46264329 - AluSx SINE Alu -20 292 3 24 0 0 0 chr10 94052655 94052679 -46264086 + AT_rich Low_complexity Low_complexity 1 24 0 555 204 20 0 chr10 94053140 94053238 -46263527 + Tigger3b DNA MER2_type 3 102 -1129 480 119 0 0 chr10 94053267 94053334 -46263431 + Tigger3b DNA MER2_type 340 406 -825 371 169 0 0 chr10 94053332 94053391 -46263374 + AluJ/FRAM SINE Alu 232 290 -12 * 734 187 60 0 chr10 94053406 94053540 -46263225 + Tigger3b DNA MER2_type 373 514 -718 * 2522 69 52 10 chr10 94053528 94053935 -46262830 - Tigger3(Golem) DNA MER2_type -296 2733 2310 2412 172 2 11 chr10 94053935 94054376 -46262389 + L1MB3 LINE L1 5705 6141 -42 * 16965 68 1 7 chr10 94054360 94054755 -46262010 + L1P LINE L1 1991 2387 -3759 5123 15 2 0 chr10 94054755 94055337 -46261428 + L1PA3 LINE L1 5571 6155 0 16965 68 1 7 chr10 94055337 94057205 -46259560 + L1P LINE L1 2387 4242 -1904 880 119 8 0 chr10 94057658 94057784 -46258981 + AluSg/x SINE Alu 166 292 -17 199 279 0 16 chr10 94057788 94057849 -46258916 + MIR SINE MIR 164 223 -39 2240 109 146 8 chr10 94058956 94059332 -46257433 + MSTA LTR MaLR 1 428 0 255 287 51 31 chr10 94059564 94059759 -46257006 - L1ME4a LINE L1 -37 6084 5886 209 194 0 0 chr10 94059844 94059880 -46256885 + L2 LINE L2 3160 3195 -77 313 266 0 0 chr10 94059897 94059976 -46256789 - L1ME4a LINE L1 -336 5785 5707 1350 241 62 8 chr10 94060368 94060738 -46256027 - MLT1J2 LTR MaLR -8 442 53 232 250 20 50 chr10 94061032 94061132 -46255633 + LTR67 LTR ERVL 460 556 -1 263 196 18 0 chr10 94061252 94061308 -46255457 - L1ME4a LINE L1 -428 5693 5637 339 352 23 17 chr10 94062467 94062643 -46254122 + L1ME LINE L1 3679 3855 -2291 357 297 81 53 chr10 94062760 94063387 -46253378 + L1ME LINE L1 4015 4659 -1487 421 321 91 73 chr10 94063933 94064429 -46252336 + L1ME LINE L1 5267 5771 -350 1864 112 52 14 chr10 94064539 94064826 -46251939 - AluSx SINE Alu -14 298 1 750 198 74 59 chr10 94065123 94065199 -46251566 + HsTC2 DNA Tc2 1 74 -1824 2259 96 7 0 chr10 94065199 94065491 -46251274 + AluSg SINE Alu 1 294 -16 750 198 74 59 chr10 94065491 94065616 -46251149 + HsTC2 DNA Tc2 74 205 -1693 698 175 58 29 chr10 94065618 94065755 -46251010 - Tigger3(Golem) DNA MER2_type -3 3026 2886 383 134 149 0 chr10 94065753 94065820 -46250945 - Tigger3(Golem) DNA MER2_type -2952 77 1 * 833 274 27 63 chr10 94065861 94066441 -46250324 - MLT1G LTR MaLR -6 549 1 278 203 29 0 chr10 94066441 94066509 -46250256 + HsTC2 DNA Tc2 236 305 -1593 480 135 10 10 chr10 94066541 94066637 -46250128 + HsTC2 DNA Tc2 1747 1842 -56 437 237 124 21 chr10 94066647 94066833 -46249932 + LTR33 LTR ERVL 8 212 -309 230 208 0 0 chr10 94067017 94067065 -46249700 + HsTC2 DNA Tc2 1836 1883 -15 23 54 0 0 chr10 94068044 94068081 -46248684 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr10 94068109 94068131 -46248634 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr10 94069017 94069038 -46247727 + (A)n Simple_repeat Simple_repeat 1 21 0 1820 234 94 11 chr10 94069324 94069897 -46246868 + L1ME3 LINE L1 5533 6153 -9 265 343 76 29 chr10 94070279 94070489 -46246276 - L1MEd LINE L1 -5455 664 445 1988 138 43 27 chr10 94070587 94070956 -46245809 - THE1C LTR MaLR 0 375 1 502 213 158 16 chr10 94071929 94072088 -46244677 - MER5A DNA MER1_type 0 189 5 5186 27 2 0 chr10 94073037 94073637 -46243128 + L1PA3 LINE L1 5552 6152 -3 21 0 0 0 chr10 94073707 94073728 -46243037 + AT_rich Low_complexity Low_complexity 1 21 0 438 294 61 17 chr10 94074084 94074315 -46242450 + L1ME3A LINE L1 5401 5641 -523 1094 218 92 78 chr10 94074336 94075024 -46241741 - Charlie2 DNA MER1_type -16 2846 2150 * 2467 240 90 15 chr10 94075018 94075800 -46240965 - Charlie2b DNA MER1_type -1519 1263 422 333 120 10 140 chr10 94075800 94075900 -46240865 + MER53 DNA DNA 4 90 -99 365 313 46 32 chr10 94076344 94076561 -46240204 + L1ME3A LINE L1 5694 5913 -257 650 205 13 40 chr10 94076751 94076902 -46239863 - MIR SINE MIR -37 225 79 23 33 0 0 chr10 94076937 94076967 -46239798 + AT_rich Low_complexity Low_complexity 1 30 0 1514 216 142 4 chr10 94078190 94078640 -46238125 - MLT2B1 LTR ERVL -8 512 1 767 161 0 46 chr10 94078932 94079062 -46237703 + FLAM_C SINE Alu 1 124 -19 31 0 0 0 chr10 94079062 94079093 -46237672 + AT_rich Low_complexity Low_complexity 1 31 0 280 244 116 47 chr10 94079140 94079226 -46237539 + MIR SINE MIR 96 187 -75 225 0 0 0 chr10 94079282 94079307 -46237458 + (CA)n Simple_repeat Simple_repeat 2 26 0 613 147 60 0 chr10 94079496 94079612 -46237153 + L1MA4 LINE L1 6015 6137 -163 2375 126 44 15 chr10 94079618 94080118 -46236647 - MER73 LTR ERVL -63 581 5 408 302 5 99 chr10 94080399 94080601 -46236164 + MER5A DNA MER1_type 2 184 -5 273 241 24 60 chr10 94081380 94081463 -46235302 + MIR3 SINE MIR 107 186 -22 302 259 35 77 chr10 94082601 94082744 -46234021 - L2 LINE L2 -6 3307 3171 21 57 0 0 chr10 94084129 94084164 -46232601 + AT_rich Low_complexity Low_complexity 1 35 0 235 282 107 39 chr10 94087474 94087577 -46229188 + L2 LINE L2 3148 3257 -15 655 194 19 120 chr10 94087754 94087970 -46228795 - MER20 DNA MER1_type -24 195 2 232 314 162 65 chr10 94087979 94088245 -46228520 + L2 LINE L2 2770 3055 -217 2003 200 3 3 chr10 94088344 94088709 -46228056 - MLT1A1 LTR MaLR 0 365 1 848 223 53 0 chr10 94088916 94089122 -46227643 + MER58A DNA MER1_type 8 224 0 663 289 77 12 chr10 94089226 94089472 -46227293 + MIR SINE MIR 1 262 0 1397 238 69 7 chr10 94089752 94090159 -46226606 + MER110 LTR ERV1 46 477 -14 295 328 35 0 chr10 94090267 94090383 -46226382 + MIR SINE MIR 51 170 -92 910 164 38 0 chr10 94090834 94090993 -46225772 - FRAM SINE Alu -12 164 1 416 280 80 13 chr10 94092374 94092524 -46224241 - MIR SINE MIR -77 185 26 234 91 0 0 chr10 94092858 94092891 -46223874 + (TTA)n Simple_repeat Simple_repeat 2 34 0 362 307 0 0 chr10 94093566 94093667 -46223098 - L2 LINE L2 0 3313 3213 243 333 0 0 chr10 94093974 94094037 -46222728 + polypurine Low_complexity Low_complexity 4 66 0 484 325 142 30 chr10 94094867 94095409 -46221356 + L1ME4a LINE L1 4245 4847 -1299 856 128 0 0 chr10 94095944 94096061 -46220704 + FLAM_C SINE Alu 2 118 -15 204 40 0 0 chr10 94096067 94096092 -46220673 + (GA)n Simple_repeat Simple_repeat 2 26 0 247 286 136 5 chr10 94096093 94096292 -46220473 + L1ME4a LINE L1 5364 5588 -574 490 329 63 50 chr10 94096296 94096755 -46220010 + L1ME4a LINE L1 5633 6097 -24 183 211 58 39 chr10 94097666 94097718 -46219047 + MER5A DNA MER1_type 29 81 -108 381 301 127 19 chr10 94097752 94098011 -46218754 - L3 LINE CR1 -640 937 651 586 257 57 33 chr10 94098043 94098288 -46218477 + MER112 DNA MER1_type 8 258 -2 1976 230 86 56 chr10 94098293 94099041 -46217724 + L1ME3A LINE L1 5377 6146 -24 266 180 16 0 chr10 94099456 94099517 -46217248 - MLT1E3 LTR MaLR 0 624 563 200 33 0 33 chr10 94099534 94099564 -46217201 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2296 104 3 0 chr10 94100759 94101067 -46215698 + AluSg SINE Alu 1 309 -1 1811 229 81 102 chr10 94101165 94101599 -46215166 + HAL1b LINE L1 90 532 -816 2561 57 3 0 chr10 94101599 94101899 -46214866 + AluSp SINE Alu 1 301 -12 1811 229 81 102 chr10 94101899 94102067 -46214698 + HAL1b LINE L1 532 702 -646 2854 13 0 0 chr10 94102067 94102379 -46214386 + AluYb8 SINE Alu 1 312 -6 1811 229 81 102 chr10 94102379 94102711 -46214054 + HAL1b LINE L1 702 993 -355 3596 122 40 11 chr10 94102711 94103291 -46213474 + L1MA5A LINE L1 5651 6252 -45 2079 135 0 3 chr10 94103291 94103595 -46213170 + AluSx SINE Alu 1 303 -9 3596 122 40 11 chr10 94103595 94103638 -46213127 + L1MA5A LINE L1 6252 6292 -5 1811 229 81 102 chr10 94103638 94103987 -46212778 + HAL1b LINE L1 993 1348 0 268 130 0 0 chr10 94104062 94104108 -46212657 - L1MA9 LINE L1 -69 6243 6198 336 48 0 0 chr10 94104316 94104358 -46212407 + (TG)n Simple_repeat Simple_repeat 1 42 0 9046 184 62 28 chr10 94104498 94106201 -46210564 - L1MA9 LINE L1 -262 6050 4406 6710 69 22 4 chr10 94106201 94107180 -46209585 - L1PA8 LINE L1 -8 6164 5175 9046 184 62 28 chr10 94107180 94108662 -46208103 - L1MA9 LINE L1 -1906 4406 2753 335 182 61 0 chr10 94108777 94108843 -46207922 - MIR3 SINE MIR -16 192 123 1525 226 72 19 chr10 94109313 94109689 -46207076 - MSTD LTR MaLR 0 396 1 502 271 14 7 chr10 94109851 94109991 -46206774 - MER5B DNA MER1_type 0 178 38 1345 176 58 8 chr10 94109991 94110252 -46206513 + AluJb SINE Alu 1 274 -38 3544 109 11 65 chr10 94110252 94110886 -46205879 + LTR8 LTR ERV1 1 600 -91 405 0 0 0 chr10 94110886 94110931 -46205834 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 183 222 22 0 chr10 94110932 94110977 -46205788 - MER5B DNA MER1_type -132 46 1 968 222 79 17 chr10 94111436 94111863 -46204902 + L1ME LINE L1 5209 5674 -490 2702 119 67 68 chr10 94111863 94112449 -46204316 + LTR59 LTR ERV1 1 585 -12 275 219 50 59 chr10 94112684 94112803 -46203962 + MER4-int LTR ERV1 375 492 -6106 323 158 26 26 chr10 94112967 94113043 -46203722 + MER4D LTR ERV1 284 359 -544 283 159 0 0 chr10 94113032 94113076 -46203689 + LTR49 LTR ERV1 165 208 -387 * 815 129 21 14 chr10 94113070 94113210 -46203555 + MER39B LTR ERV1 513 653 0 1637 147 29 38 chr10 94113223 94113564 -46203201 + MER39B-int LTR ERV1 13 350 -5981 815 171 110 92 chr10 94113532 94113931 -46202834 + MER39B-int LTR ERV1 347 1482 -4464 * 1240 143 85 76 chr10 94113926 94114426 -46202339 + MER4B-int LTR ERV1 766 1917 -2963 198 0 0 0 chr10 94114544 94114566 -46202199 + (T)n Simple_repeat Simple_repeat 1 22 0 3903 171 14 1 chr10 94114586 94115288 -46201477 - MER50 LTR ERV1 -23 711 1 387 191 0 0 chr10 94115290 94115358 -46201407 + MER4B-int LTR ERV1 1404 1471 -4860 1943 201 84 83 chr10 94115358 94116140 -46200625 + LTR1B LTR ERV1 1 783 -43 1434 251 40 63 chr10 94116155 94116917 -46199848 + MER4B-int LTR ERV1 1860 2656 -3675 433 245 136 34 chr10 94116921 94117068 -46199697 + MER34C LTR ERV1 155 316 -269 4516 173 39 48 chr10 94117078 94117864 -46198901 + MER4B-int LTR ERV1 1834 2625 -3070 2597 48 0 13 chr10 94117864 94118176 -46198589 + AluY SINE Alu 1 308 -3 4516 173 39 48 chr10 94118176 94118782 -46197983 + MER4B-int LTR ERV1 2625 3767 -1928 3461 71 0 2 chr10 94118836 94119285 -46197480 + LTR7 LTR ERV1 1 448 -2 17521 92 25 22 chr10 94119287 94122957 -46193808 + HERVH LTR ERV1 1 3746 -3967 1151 42 0 0 chr10 94122952 94123096 -46193669 + HERVH LTR ERV1 3850 3993 -3720 * 4493 142 0 1 chr10 94123098 94123761 -46193004 + HERVH LTR ERV1 4488 5149 -2564 1447 120 18 5 chr10 94123762 94123979 -46192786 + HERVH LTR ERV1 5600 5819 -1894 * 2490 73 43 14 chr10 94123977 94124346 -46192419 + HERVH LTR ERV1 7322 7701 -12 2878 164 23 62 chr10 94124346 94124358 -46192407 + LTR9 LTR ERV1 7 18 -594 3613 53 0 2 chr10 94124358 94124807 -46191958 + LTR7 LTR ERV1 1 448 -2 1954 129 0 0 chr10 94124809 94125088 -46191677 + AluSx SINE Alu 22 300 -12 2878 164 23 62 chr10 94125088 94125700 -46191065 + LTR9 LTR ERV1 19 612 0 4956 214 46 48 chr10 94125701 94126628 -46190137 + LTR49-int LTR ERV1 747 1674 -2517 2144 116 0 0 chr10 94126628 94126920 -46189845 - AluSx SINE Alu 0 312 21 4956 214 46 48 chr10 94126920 94127077 -46189688 + LTR49-int LTR ERV1 1674 1831 -2360 1224 126 70 28 chr10 94127077 94127292 -46189473 + L1PA11 LINE L1 5951 6174 0 4956 214 46 48 chr10 94127292 94127424 -46189341 + LTR49-int LTR ERV1 1831 1962 -2229 958 189 0 47 chr10 94127524 94127714 -46189051 + LTR49-int LTR ERV1 5047 5227 -1531 409 95 191 24 chr10 94127708 94127792 -46188973 + LTR49-int LTR ERV1 4887 4984 -1347 * 2489 174 57 48 chr10 94127780 94128321 -46188444 + LTR49-int LTR ERV1 5557 6102 -656 1364 208 23 8 chr10 94128320 94128585 -46188180 + LTR49-int LTR ERV1 6829 7097 -1023 * 3056 136 60 72 chr10 94128591 94129189 -46187576 + LTR59 LTR ERV1 1 591 -6 1164 236 78 3 chr10 94129189 94129533 -46187232 + L1ME1 LINE L1 5668 6037 -129 1504 184 42 113 chr10 94129533 94129723 -46187042 + MSTD LTR MaLR 1 203 -193 1996 129 43 0 chr10 94129723 94130003 -46186762 + AluSx SINE Alu 6 297 -15 1504 184 42 113 chr10 94130003 94130183 -46186582 + MSTD LTR MaLR 203 340 -56 2123 150 135 8 chr10 94130183 94130562 -46186203 + MSTA LTR MaLR 2 428 0 1504 184 42 113 chr10 94130562 94130614 -46186151 + MSTD LTR MaLR 340 394 -2 251 243 7 100 chr10 94130622 94130762 -46186003 + L1MB7 LINE L1 6049 6175 -9 27 29 0 0 chr10 94130765 94130799 -46185966 + AT_rich Low_complexity Low_complexity 1 34 0 440 205 0 0 chr10 94132216 94132294 -46184471 - Tigger5 DNA MER2_type -2244 79 2 266 169 70 0 chr10 94132349 94132420 -46184345 - MIR SINE MIR -73 189 114 22036 132 42 16 chr10 94132462 94132548 -46184217 + L1M1 LINE L1 8 90 -7475 333 82 0 0 chr10 94132548 94132597 -46184168 + (CA)n Simple_repeat Simple_repeat 2 50 0 22036 132 42 16 chr10 94132597 94133113 -46183652 + L1M1 LINE L1 90 592 -6973 1921 144 144 24 chr10 94133113 94133495 -46183270 + MSTA LTR MaLR 1 428 0 9246 144 16 41 chr10 94133497 94135116 -46181649 + MSTA-int LTR MaLR 3 1580 0 1862 167 143 11 chr10 94135116 94135494 -46181271 + MSTA LTR MaLR 1 428 0 22036 132 42 16 chr10 94135494 94138122 -46178643 + L1M1 LINE L1 592 3153 -4412 2288 84 0 0 chr10 94138122 94138408 -46178357 + AluY SINE Alu 25 310 -1 22036 132 42 16 chr10 94138408 94138467 -46178298 + L1M1 LINE L1 3153 3209 -4356 198 0 0 0 chr10 94138467 94138489 -46178276 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 22036 132 42 16 chr10 94138489 94138707 -46178058 + L1M1 LINE L1 3209 3610 -3955 778 155 0 68 chr10 94138707 94138855 -46177910 + AluJo SINE Alu 2 139 -173 10311 172 51 57 chr10 94138855 94140824 -46175941 + L1M1 LINE L1 3595 5549 -2016 1416 48 59 0 chr10 94140824 94141010 -46175755 - L1PA7 LINE L1 -2 6152 5956 10311 172 51 57 chr10 94141010 94141530 -46175235 + L1M1 LINE L1 5549 6070 -1495 2060 133 3 7 chr10 94141941 94142243 -46174522 + AluJb SINE Alu 1 301 -11 303 269 83 0 chr10 94142403 94142511 -46174254 + MIR3 SINE MIR 58 174 -34 324 209 139 0 chr10 94142511 94142597 -46174168 - LTR33 LTR ERVL 0 521 424 9126 112 110 30 chr10 94142606 94144179 -46172586 - pTR5 LTR ERV1 0 2438 741 449 229 174 35 chr10 94144792 94144993 -46171772 + MIR SINE MIR 8 236 -26 196 355 20 33 chr10 94145601 94145753 -46171012 - L2 LINE L2 0 3272 3123 588 245 164 101 chr10 94145854 94146361 -46170404 - MLT1H LTR MaLR -3 546 8 443 333 88 74 chr10 94147029 94147380 -46169385 - L2 LINE L2 -3 3269 2914 1580 191 10 17 chr10 94147952 94148246 -46168519 - AluJo SINE Alu -20 292 1 225 257 140 66 chr10 94148665 94148801 -46167964 - L2 LINE L2 0 3313 3168 1336 184 65 5 chr10 94148801 94149121 -46167644 + MSTD LTR MaLR 1 396 0 180 219 24 0 chr10 94149144 94149185 -46167580 - MIR SINE MIR -134 74 33 1638 300 187 7 chr10 94149197 94150434 -46166331 + L2 LINE L2 1768 3237 -76 209 169 17 0 chr10 94151555 94151614 -46165151 + CT-rich Low_complexity Low_complexity 2 61 0 342 0 0 0 chr10 94151614 94151652 -46165113 + (CA)n Simple_repeat Simple_repeat 1 38 0 270 100 0 0 chr10 94151779 94151819 -46164946 + MIR SINE MIR 121 160 -102 453 319 39 17 chr10 94152129 94152361 -46164404 - MIR SINE MIR -2 260 24 191 289 24 36 chr10 94152336 94152419 -46164346 + L2 LINE L2 3152 3233 -39 * 526 255 6 32 chr10 94152466 94152623 -46164142 + MIR SINE MIR 8 160 -102 251 240 0 0 chr10 94152671 94152721 -46164044 + MER46C DNA MER2_type 1 50 -288 1286 174 29 4 chr10 94152745 94152986 -46163779 - MLT1D LTR MaLR 0 505 259 231 211 0 0 chr10 94152977 94153015 -46163750 + MER46C DNA MER2_type 287 324 -14 * 24 32 0 0 chr10 94153017 94153048 -46163717 + AT_rich Low_complexity Low_complexity 1 31 0 2082 146 3 0 chr10 94153154 94153456 -46163309 + AluSx SINE Alu 1 303 -9 1705 192 35 49 chr10 94153483 94153853 -46162912 + MLT1A1 LTR MaLR 1 365 0 384 202 35 0 chr10 94154533 94154647 -46162118 + CT-rich Low_complexity Low_complexity 1 118 0 236 339 36 9 chr10 94154648 94154760 -46162005 - L2 LINE L2 -3 3269 3155 314 235 0 10 chr10 94155090 94155188 -46161577 + GA-rich Low_complexity Low_complexity 4 100 0 1812 175 24 15 chr10 94155215 94155553 -46161212 + MER58B DNA MER1_type 1 341 0 667 260 35 0 chr10 94155673 94155842 -46160923 - MER5B DNA MER1_type 0 178 4 2625 58 0 6 chr10 94155880 94156193 -46160572 + AluY SINE Alu 1 311 0 194 346 102 8 chr10 94156196 94156214 -46160551 - L2 LINE L2 -613 2701 2686 635 213 40 40 chr10 94156214 94156388 -46160377 + MER5B DNA MER1_type 1 174 -4 194 346 102 8 chr10 94156388 94156496 -46160269 - L2 LINE L2 -628 2686 2563 186 348 22 0 chr10 94156986 94157078 -46159687 + MIR SINE MIR 162 255 -7 1407 183 119 18 chr10 94157497 94157825 -46158940 - MER46B DNA MER2_type 0 236 1 1179 244 29 65 chr10 94157936 94158322 -46158443 - MLT1J LTR MaLR -139 372 1 311 310 39 0 chr10 94158546 94158675 -46158090 + MIR SINE MIR 53 186 -76 313 330 65 27 chr10 94159312 94159497 -46157268 - L1ME3A LINE L1 -7 6163 5972 2140 88 33 26 chr10 94159499 94159806 -46156959 - AluSp SINE Alu -4 309 1 234 275 33 11 chr10 94159876 94159967 -46156798 - L1ME3A LINE L1 -220 5950 5858 383 267 46 20 chr10 94159970 94160165 -46156600 + L1MC5 LINE L1 7727 7926 -35 262 273 39 0 chr10 94160164 94160241 -46156524 - L1ME3A LINE L1 -291 5879 5800 * 336 213 12 12 chr10 94160245 94160325 -46156440 + MER5A DNA MER1_type 7 86 -103 21 36 0 0 chr10 94160538 94160566 -46156199 + AT_rich Low_complexity Low_complexity 1 28 0 257 127 113 42 chr10 94160638 94160709 -46156056 + MER52C LTR ERV1 8 83 -1195 7075 173 31 47 chr10 94161064 94162621 -46154144 + MER52A LTR ERV1 345 1755 0 21 36 0 0 chr10 94162687 94162715 -46154050 + AT_rich Low_complexity Low_complexity 1 28 0 471 298 114 0 chr10 94163503 94163731 -46153034 - MIR SINE MIR 0 262 9 3686 129 35 7 chr10 94164045 94164648 -46152117 - L1MA2 LINE L1 -1 6303 5684 287 276 53 46 chr10 94164752 94164904 -46151861 - MLT1K LTR MaLR -4 584 432 216 163 20 20 chr10 94164934 94164983 -46151782 - L3 LINE CR1 -490 1087 1039 722 286 122 23 chr10 94165336 94165640 -46151125 - MLT1L LTR MaLR -102 513 180 496 298 110 8 chr10 94166101 94166410 -46150355 - L2 LINE L2 -292 3021 2677 450 255 15 7 chr10 94166512 94166666 -46150099 - L1ME3A LINE L1 -554 5608 5454 357 347 72 22 chr10 94166782 94167004 -46149761 - L2 LINE L2 -381 2933 2701 640 278 55 62 chr10 94167787 94168624 -46148141 + L1MEc LINE L1 802 1591 -4624 2423 82 3 0 chr10 94168624 94168930 -46147835 + AluY SINE Alu 1 307 -4 640 278 55 62 chr10 94168930 94168993 -46147772 + L1MEc LINE L1 1591 1653 -4562 2382 115 25 6 chr10 94168998 94169355 -46147410 + THE1B LTR MaLR 1 364 0 791 145 14 51 chr10 94169376 94169514 -46147251 + FLAM_C SINE Alu 1 133 0 24 0 0 0 chr10 94169515 94169539 -46147226 + AT_rich Low_complexity Low_complexity 1 24 0 1588 214 49 33 chr10 94169751 94170264 -46146501 + L1ME2 LINE L1 5593 6113 -51 1734 160 6 63 chr10 94170573 94170904 -46145861 - AluJo SINE Alu 0 312 1 578 208 56 7 chr10 94170945 94171089 -46145676 + L1ME2 LINE L1 6013 6163 -1 330 327 30 0 chr10 94171091 94171192 -46145573 - L2 LINE L2 -609 2705 2602 210 265 154 34 chr10 94171218 94171335 -46145430 - L2 LINE L2 -1498 1816 1686 1625 152 48 4 chr10 94171383 94171653 -46145112 + AluSx SINE Alu 1 282 -30 318 308 88 22 chr10 94171727 94171954 -46144811 - L2 LINE L2 -1714 1600 1359 447 294 48 0 chr10 94173650 94173776 -46142989 - L3 LINE CR1 -13 1564 1433 21 0 0 0 chr10 94174048 94174069 -46142696 + AT_rich Low_complexity Low_complexity 1 21 0 1196 182 76 0 chr10 94175956 94176192 -46140573 + Tigger7 DNA MER2_type 14 267 -466 459 92 0 0 chr10 94176195 94176260 -46140505 + Tigger7 DNA MER2_type 2394 2458 -33 300 301 54 0 chr10 94176298 94176391 -46140374 - MIR3 SINE MIR -26 182 85 284 191 15 15 chr10 94176761 94176829 -46139936 - MLT1B LTR MaLR 0 390 323 251 190 127 13 chr10 94176855 94176913 -46139852 - MLT1A2 LTR MaLR -160 214 132 2325 104 0 13 chr10 94176913 94177229 -46139536 - AluSx SINE Alu 0 312 1 251 190 127 13 chr10 94177229 94177249 -46139516 - MLT1A2 LTR MaLR -242 132 116 294 233 0 14 chr10 94177349 94177422 -46139343 - MLT1A2 LTR MaLR -301 73 2 21 0 0 0 chr10 94178946 94178967 -46137798 + AT_rich Low_complexity Low_complexity 1 21 0 243 255 0 19 chr10 94178998 94179104 -46137661 + L2 LINE L2 3133 3313 0 200 306 16 0 chr10 94179576 94179638 -46137127 - L2 LINE L2 0 3313 3251 * 331 177 146 52 chr10 94179629 94179725 -46137040 - L2 LINE L2 -950 2364 2260 601 311 236 0 chr10 94179750 94180094 -46136671 - L2 LINE L2 -1159 2155 1731 1847 147 7 7 chr10 94180303 94180595 -46136170 - AluSx SINE Alu -20 292 1 332 278 129 113 chr10 94180606 94180994 -46135771 - L2 LINE L2 -1 3271 2878 504 248 0 9 chr10 94181090 94181203 -46135562 - MER58 DNA MER1_type -2306 114 3 1055 203 28 37 chr10 94181323 94181738 -46135027 - L1 LINE L1 -3856 3709 3301 614 309 96 10 chr10 94181748 94182039 -46134726 - L1 LINE L1 -5127 2369 2054 638 256 45 15 chr10 94182442 94182641 -46134124 + MLT1H1 LTR MaLR 1 205 -350 235 276 26 13 chr10 94182739 94182815 -46133950 - MLT1I LTR MaLR -308 247 171 373 311 94 52 chr10 94182820 94183279 -46133486 + L2 LINE L2 2226 2703 -611 735 250 54 7 chr10 94183374 94183650 -46133115 - L1MC4a LINE L1 -1760 6048 5760 2838 116 7 36 chr10 94185391 94185832 -46130933 + MSTC LTR MaLR 1 428 0 277 273 128 27 chr10 94186893 94187080 -46129685 - MLT1I LTR MaLR -203 206 1 770 172 8 0 chr10 94187331 94187459 -46129306 + FLAM_C SINE Alu 1 129 -14 2438 80 0 3 chr10 94187486 94187788 -46128977 + AluSx SINE Alu 1 301 -11 348 260 72 94 chr10 94188249 94188526 -46128239 - L1ME4a LINE L1 -4 6117 5847 392 376 6 0 chr10 94189510 94189675 -46127090 + MIR SINE MIR 86 251 -11 225 94 0 0 chr10 94189682 94189714 -46127051 + (ATG)n Simple_repeat Simple_repeat 3 34 0 180 0 0 0 chr10 94189850 94189870 -46126895 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 713 305 112 52 chr10 94190043 94190901 -46125864 - L1MEd LINE L1 -5194 925 17 431 296 50 20 chr10 94191558 94191757 -46125008 + MIR SINE MIR 46 250 -12 655 333 63 42 chr10 94192151 94192484 -46124281 + L2 LINE L2 2933 3272 0 395 143 90 158 chr10 94194355 94194441 -46122324 - L2 LINE L2 -2 3311 3236 2169 121 0 13 chr10 94194441 94194747 -46122018 + AluSg SINE Alu 2 303 -7 395 143 90 158 chr10 94194747 94194793 -46121972 - L2 LINE L2 -77 3236 3188 510 206 10 0 chr10 94194811 94194913 -46121852 - MIR SINE MIR -35 227 125 578 272 41 0 chr10 94194949 94195096 -46121669 - MIR SINE MIR -108 154 2 259 341 12 0 chr10 94196122 94196207 -46120558 + L2 LINE L2 2970 3055 -217 651 271 18 18 chr10 94196980 94197150 -46119615 + MIR SINE MIR 12 181 -81 282 194 0 0 chr10 94198036 94198103 -46118662 + GA-rich Low_complexity Low_complexity 2 68 0 203 125 21 21 chr10 94199579 94199627 -46117138 + T-rich Low_complexity Low_complexity 1 48 0 242 216 0 0 chr10 94199796 94199847 -46116918 + Tigger5 DNA MER2_type 3 53 -2270 388 200 0 12 chr10 94199852 94199932 -46116833 - Tigger5 DNA MER2_type -3 2320 2242 1628 238 10 24 chr10 94200019 94200524 -46116241 + L1 LINE L1 4880 5377 -769 40 73 0 0 chr10 94200679 94200761 -46116004 + AT_rich Low_complexity Low_complexity 1 82 0 1892 152 66 32 chr10 94200834 94201362 -46115403 - MLT2A2 LTR ERVL 0 554 5 3040 137 11 35 chr10 94201388 94201709 -46115056 - Tigger3b DNA MER2_type -2491 537 233 1767 167 6 43 chr10 94201709 94202033 -46114732 - AluJo SINE Alu 0 312 1 3040 137 11 35 chr10 94202033 94202259 -46114506 - Tigger3b DNA MER2_type -2795 233 3 1629 128 8 0 chr10 94202266 94202532 -46114233 - L1M2 LINE L1 -533 5779 5512 3880 105 6 50 chr10 94202838 94203476 -46113289 - MER4B LTR ERV1 0 610 1 1264 177 157 4 chr10 94203700 94203949 -46112816 + AluJo SINE Alu 1 287 -25 2135 94 3 14 chr10 94203972 94204258 -46112507 + AluY SINE Alu 14 296 -15 821 277 117 35 chr10 94204406 94204807 -46111958 - Charlie8 DNA MER1_type -556 1861 1428 1334 263 60 60 chr10 94204890 94205491 -46111274 - Charlie8 DNA MER1_type -1160 1257 657 1980 184 30 73 chr10 94205491 94206024 -46110741 + MLT2B1 LTR ERVL 1 510 -10 796 257 55 20 chr10 94206028 94206374 -46110391 - Charlie8 DNA MER1_type -1755 662 305 1058 104 0 0 chr10 94207507 94207642 -46109123 - AluSp/q SINE Alu -15 298 164 1536 161 29 29 chr10 94207642 94207921 -46108844 - AluJo SINE Alu -25 287 9 290 194 36 29 chr10 94208068 94208207 -46108558 + CT-rich Low_complexity Low_complexity 1 140 0 3457 144 41 22 chr10 94208682 94209397 -46107368 + L1 LINE L1 4130 4857 -1289 1455 132 71 17 chr10 94209405 94209701 -46107064 + L1MA6 LINE L1 5989 6300 0 311 148 136 34 chr10 94210031 94210119 -46106646 + MER5C DNA MER1_type 2 98 -226 244 182 261 0 chr10 94210130 94210218 -46106547 + FLAM_C SINE Alu 22 132 -1 260 184 20 0 chr10 94210530 94210579 -46106186 + MER5C DNA MER1_type 275 324 0 2963 69 13 8 chr10 94261102 94261494 -46055271 - L1PA6 LINE L1 -82 6072 5679 2215 92 11 0 chr10 94261991 94262275 -46054490 + AluSc SINE Alu 1 287 -22 268 258 79 0 chr10 94263564 94263653 -46053112 + MIR3 SINE MIR 102 197 -11 223 260 91 0 chr10 94264830 94264907 -46051858 + MIR SINE MIR 56 139 -123 1652 179 7 19 chr10 94265510 94265817 -46050948 + AluJo SINE Alu 1 303 -9 13182 127 12 33 chr10 94267691 94270893 -46045872 - L1P3 LINE L1 -3253 3208 2 1553 173 9 47 chr10 94270897 94271215 -46045550 - AluJb SINE Alu -6 306 1 1941 226 55 26 chr10 94271287 94271356 -46045409 + MLT1D LTR MaLR 1 67 -438 498 108 0 0 chr10 94271356 94271430 -46045335 + (TA)n Simple_repeat Simple_repeat 1 74 0 1941 226 55 26 chr10 94271430 94271851 -46044914 + MLT1D LTR MaLR 67 505 0 1355 354 50 28 chr10 94272115 94273079 -46043686 - ERVL LTR ERVL -403 5361 4377 6998 149 25 3 chr10 94273111 94274233 -46042532 - Ricksha DNA DNA -40 3206 2060 422 158 13 0 chr10 94274233 94274309 -46042456 - MLT2B3 LTR ERVL -469 85 9 789 133 83 4 chr10 94274309 94274550 -46042215 - Ricksha DNA DNA -1693 353 2 * 3119 312 95 21 chr10 94274550 94276042 -46040723 - ERVL LTR ERVL -1384 4380 2776 191 163 82 20 chr10 94276271 94276320 -46040445 - MIR SINE MIR -121 141 90 228 274 48 24 chr10 94276452 94276536 -46040229 - L3 LINE CR1 -3 1574 1489 532 283 91 40 chr10 94276609 94276906 -46039859 - MLT1H LTR MaLR 0 549 238 258 356 144 0 chr10 94277092 94277252 -46039513 + MIR SINE MIR 48 230 -32 271 312 23 11 chr10 94277575 94277683 -46039082 + MIR SINE MIR 17 126 -82 1196 46 13 20 chr10 94277923 94278076 -46038689 - L1PA6 LINE L1 -4 6150 5999 814 173 8 0 chr10 94278410 94278537 -46038228 + FLAM_C SINE Alu 1 128 -15 430 222 69 49 chr10 94278609 94278771 -46037994 - MER5B DNA MER1_type -5 184 8 23 0 0 0 chr10 94279285 94279308 -46037457 + AT_rich Low_complexity Low_complexity 1 23 0 700 157 0 0 chr10 94279308 94279410 -46037355 - U6 snRNA snRNA -4 103 2 344 293 73 7 chr10 94279578 94279728 -46037037 - MIR3 SINE MIR -13 195 36 296 353 7 7 chr10 94280927 94281077 -46035688 - L1MC4a LINE L1 -1927 5881 5732 840 161 0 0 chr10 94281865 94281983 -46034782 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr10 94281985 94282010 -46034755 + AT_rich Low_complexity Low_complexity 1 25 0 269 154 19 19 chr10 94282164 94282216 -46034549 + L2 LINE L2 3247 3298 -15 639 263 11 17 chr10 94282482 94282661 -46034104 + MER5B DNA MER1_type 1 178 0 2077 133 0 0 chr10 94282830 94283164 -46033601 - AluSx SINE Alu 0 334 1 304 263 25 62 chr10 94283164 94283314 -46033451 - L2 LINE L2 -6 3307 3160 299 382 66 0 chr10 94283382 94283518 -46033247 + MIR3 SINE MIR 30 174 -34 192 309 32 32 chr10 94284959 94285053 -46031712 - MIR3 SINE MIR -7 201 108 1246 234 122 53 chr10 94285107 94285715 -46031050 + L1MC4 LINE L1 7392 8041 -1 414 288 27 0 chr10 94285736 94285847 -46030918 + L2 LINE L2 3191 3304 -9 308 202 7 7 chr10 94286578 94286723 -46030042 + CT-rich Low_complexity Low_complexity 1 145 0 183 271 85 17 chr10 94288094 94288153 -46028612 - MIR SINE MIR -120 142 80 189 107 0 0 chr10 94288155 94288183 -46028582 + (TG)n Simple_repeat Simple_repeat 2 29 0 2227 116 3 0 chr10 94288582 94288892 -46027873 + AluY SINE Alu 1 311 0 3234 141 31 2 chr10 94288918 94289437 -46027328 + L1MB3 LINE L1 5621 6154 -29 335 322 89 0 chr10 94289517 94289775 -46026990 + L1M4 LINE L1 2206 2486 -3660 1401 207 10 39 chr10 94290401 94290706 -46026059 + AluJo SINE Alu 1 296 -16 743 66 52 0 chr10 94291221 94291357 -46025408 + (TAGA)n Simple_repeat Simple_repeat 1 143 0 2859 102 3 0 chr10 94291357 94291711 -46025054 + THE1A LTR MaLR 1 355 0 1024 75 29 0 chr10 94291729 94291902 -46024863 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 655 302 39 17 chr10 94293255 94293487 -46023278 - MIR SINE MIR -12 250 14 541 302 21 21 chr10 94293709 94293898 -46022867 - MIR SINE MIR -54 208 20 278 276 10 41 chr10 94293908 94294006 -46022759 + MER117 DNA MER1_type 24 118 -79 1692 200 7 0 chr10 94294011 94294321 -46022444 + AluJo SINE Alu 1 312 0 243 333 28 28 chr10 94294418 94294526 -46022239 - MIR3 SINE MIR -48 160 53 440 233 107 89 chr10 94295408 94295678 -46021087 - MER20B DNA MER1_type 0 783 509 1689 249 103 15 chr10 94295786 94296260 -46020505 - MER20B DNA MER1_type -267 516 1 1812 151 10 39 chr10 94296897 94297202 -46019563 - AluJb SINE Alu -16 296 1 416 274 18 9 chr10 94297827 94297960 -46018805 - MIR SINE MIR -61 147 23 24 0 0 0 chr10 94298303 94298327 -46018438 + AT_rich Low_complexity Low_complexity 1 24 0 234 317 179 0 chr10 94298461 94298584 -46018181 + MIR SINE MIR 8 152 -110 2239 113 7 3 chr10 94298633 94298942 -46017823 + AluSg SINE Alu 1 310 0 2193 109 0 10 chr10 94299137 94299431 -46017334 - AluSc SINE Alu -18 291 1 6712 96 26 0 chr10 94299518 94300671 -46016094 - L1PA11 LINE L1 -1 6173 5006 989 209 22 0 chr10 94301007 94301189 -46015576 - MLT1C LTR MaLR -5 462 277 * 1859 174 7 83 chr10 94301187 94301564 -46015201 + MLT1B LTR MaLR 9 354 -36 1841 159 61 12 chr10 94301564 94301890 -46014875 - MER2 DNA MER2_type -1 343 2 1859 174 7 83 chr10 94301890 94301921 -46014844 + MLT1B LTR MaLR 354 386 -4 1431 171 61 0 chr10 94301925 94302188 -46014577 - MLT1C LTR MaLR -186 281 3 764 270 34 30 chr10 94302199 94302477 -46014288 + MLT1H LTR MaLR 1 320 -229 1602 197 19 3 chr10 94302531 94302840 -46013925 + MER58B DNA MER1_type 27 340 -1 297 230 104 35 chr10 94302850 94303002 -46013763 + MLT1G LTR MaLR 375 583 -7 1842 178 0 0 chr10 94303042 94303334 -46013431 - AluJb SINE Alu -20 292 1 2159 271 96 44 chr10 94304038 94304455 -46012310 - L2 LINE L2 -22 3291 2897 1528 201 23 0 chr10 94304455 94304754 -46012011 - AluJo SINE Alu -6 306 1 2159 271 96 44 chr10 94304754 94304768 -46011997 - L2 LINE L2 -416 2897 2885 2112 125 3 0 chr10 94304768 94305063 -46011702 - AluSq SINE Alu -17 296 1 2159 271 96 44 chr10 94305063 94305676 -46011089 - L2 LINE L2 -428 2885 2194 286 255 32 21 chr10 94305679 94305773 -46010992 - LTR16C LTR ERVL -140 351 257 7609 56 0 5 chr10 94305888 94307197 -46009568 - L1PA7 LINE L1 -3 6151 4847 1188 260 39 14 chr10 94307304 94307662 -46009103 + MLT1J LTR MaLR 40 406 -105 481 184 144 115 chr10 94307889 94307956 -46008809 + MER5A DNA MER1_type 9 73 -116 781 181 9 0 chr10 94307956 94308072 -46008693 + FLAM_C SINE Alu 1 117 -16 481 184 144 115 chr10 94308072 94308178 -46008587 + MER5A DNA MER1_type 73 187 -2 660 262 23 41 chr10 94308885 94309106 -46007659 + MIR SINE MIR 31 247 -15 204 40 0 0 chr10 94309122 94309147 -46007618 + (TA)n Simple_repeat Simple_repeat 1 25 0 1451 155 69 0 chr10 94309528 94309760 -46007005 + AluSq SINE Alu 18 265 -48 383 324 49 7 chr10 94309815 94309957 -46006808 - MIR SINE MIR -112 150 3 209 306 0 0 chr10 94309983 94310032 -46006733 - L2 LINE L2 -229 3043 2995 7538 32 2 0 chr10 94310032 94310911 -46005854 - L1PA4 LINE L1 -1 6154 5274 2119 234 105 18 chr10 94311135 94311743 -46005022 + MLT2F LTR ERVL 1 661 -2 230 253 0 55 chr10 94311749 94311840 -46004925 - LTR67 LTR ERVL -15 542 457 226 284 95 38 chr10 94311878 94312089 -46004676 + L2 LINE L2 1685 1907 -1407 905 232 93 30 chr10 94312212 94312544 -46004221 + LTR16A LTR ERVL 97 449 -1 702 340 110 17 chr10 94312544 94313027 -46003738 + L2 LINE L2 1989 2516 -798 237 265 12 84 chr10 94313536 94313619 -46003146 - L2 LINE L2 -10 3262 3186 465 232 226 6 chr10 94313927 94314104 -46002661 - MIR SINE MIR 0 262 47 510 224 155 0 chr10 94314663 94314779 -46001986 - MER63 DNA MER1_type -302 760 1 2254 99 7 0 chr10 94314979 94315273 -46001492 - AluSx SINE Alu -2 310 15 2282 62 0 10 chr10 94315300 94315591 -46001174 - AluY SINE Alu 0 311 24 2626 210 114 85 chr10 94315619 94316434 -46000331 - MER97b DNA MER1_type? -7 1046 194 1586 166 6 54 chr10 94316434 94316747 -46000018 + AluJo SINE Alu 1 298 -14 2626 210 114 85 chr10 94316747 94316947 -45999818 - MER97b DNA MER1_type? -859 194 1 347 225 33 67 chr10 94316947 94317067 -45999698 + MER5B DNA MER1_type 63 178 0 890 220 181 46 chr10 94317428 94317950 -45998815 + L2 LINE L2 2626 3227 -86 1066 178 0 0 chr10 94317962 94318136 -45998629 - AluJb SINE Alu -10 302 129 284 284 14 0 chr10 94318138 94318212 -45998553 + L2 LINE L2 3239 3313 0 212 59 29 0 chr10 94318240 94318274 -45998491 + (TAA)n Simple_repeat Simple_repeat 2 36 0 473 279 125 14 chr10 94318322 94318530 -45998235 - HAL1 LINE L1 -113 2394 2164 315 242 10 61 chr10 94318581 94318680 -45998085 - HAL1b LINE L1 -441 907 814 559 297 35 103 chr10 94319956 94320411 -45996354 - L2 LINE L2 0 3313 2890 551 167 61 18 chr10 94321278 94321392 -45995373 - MER3 DNA MER1_type 0 209 91 180 0 0 0 chr10 94322047 94322067 -45994698 + (A)n Simple_repeat Simple_repeat 1 20 0 906 213 11 0 chr10 94322262 94322436 -45994329 - MER5B DNA MER1_type 0 178 3 288 77 0 0 chr10 94322441 94322480 -45994285 + (A)n Simple_repeat Simple_repeat 1 39 0 404 333 82 31 chr10 94322994 94323189 -45993576 - L2 LINE L2 -5 3267 3063 312 347 41 0 chr10 94323267 94323388 -45993377 + LTR16A LTR ERVL 2 127 -323 322 219 15 88 chr10 94323454 94323591 -45993174 - L2 LINE L2 -448 2866 2740 5465 110 4 8 chr10 94323767 94325122 -45991643 + L1PA7 LINE L1 4638 5985 -169 16172 117 16 8 chr10 94325222 94327690 -45989075 - L1P LINE L1 -1555 4591 2104 790 236 97 110 chr10 94328153 94328333 -45988432 + MLT1K LTR MaLR 112 293 -295 2018 143 0 10 chr10 94328333 94328634 -45988131 - AluSx SINE Alu -14 298 1 790 236 97 110 chr10 94328634 94328936 -45987829 + MLT1K LTR MaLR 293 588 0 2279 145 89 56 chr10 94329462 94329639 -45987126 + MSTA LTR MaLR 1 171 -257 2313 51 51 0 chr10 94329639 94329935 -45986830 + AluY SINE Alu 1 311 0 2279 145 89 56 chr10 94329935 94330171 -45986594 + MSTA LTR MaLR 171 428 0 2401 40 6 77 chr10 94330364 94330691 -45986074 + AluY SINE Alu 1 304 -7 338 346 62 11 chr10 94330909 94331088 -45985677 - Tigger8 DNA MER2_type -6 660 473 2310 216 48 47 chr10 94331118 94331885 -45984880 - Charlie2 DNA MER1_type -234 2628 1861 600 260 178 19 chr10 94331895 94332164 -45984601 - Charlie2 DNA MER1_type -2547 315 4 1056 318 65 27 chr10 94332164 94332858 -45983907 - L2 LINE L2 -114 3199 2472 1560 208 36 34 chr10 94333188 94333636 -45983129 + MER69 DNA AcHobo 2078 2526 0 1202 280 84 69 chr10 94333700 94334110 -45982655 - L2 LINE L2 -924 2390 1988 1907 171 128 26 chr10 94334110 94334525 -45982240 - MSTB2 LTR MaLR 0 457 1 1202 280 84 69 chr10 94334525 94334661 -45982104 - L2 LINE L2 -1326 1988 1856 2285 119 3 0 chr10 94334661 94334972 -45981793 + AluSx SINE Alu 1 312 0 1202 280 84 69 chr10 94334972 94335220 -45981545 - L2 LINE L2 -1458 1856 1583 617 124 21 10 chr10 94337310 94337407 -45979358 + MER4A LTR ERV1 1 98 -566 1940 120 182 31 chr10 94337407 94337758 -45979007 + MER4A LTR ERV1 261 664 0 672 111 60 34 chr10 94338319 94338436 -45978329 + L1MB3 LINE L1 6058 6177 -6 591 280 91 18 chr10 94338670 94338956 -45977809 - L1MC4a LINE L1 -1878 5930 5624 24 0 0 0 chr10 94339250 94339274 -45977491 + AT_rich Low_complexity Low_complexity 1 24 0 389 246 33 60 chr10 94339359 94339521 -45977244 - MIR3 SINE MIR -73 135 3 7866 118 35 23 chr10 94339873 94340594 -45976171 + Tigger3b DNA MER2_type 2 746 -2282 2333 99 0 0 chr10 94340594 94340888 -45975877 + AluSg SINE Alu 1 294 -16 7866 118 35 23 chr10 94340888 94341380 -45975385 + Tigger3b DNA MER2_type 746 1230 -1 385 228 25 0 chr10 94341627 94341706 -45975059 - MLT1J2 LTR MaLR -24 426 346 321 216 137 22 chr10 94341806 94341945 -45974820 - MLT1J2 LTR MaLR -291 159 5 219 36 0 0 chr10 94342829 94342857 -45973908 + (TG)n Simple_repeat Simple_repeat 1 28 0 396 311 49 44 chr10 94344867 94345050 -45971715 - MIR3 SINE MIR -7 201 18 990 309 40 21 chr10 94345715 94346142 -45970623 + LTR16A LTR ERVL 16 450 0 2474 169 36 36 chr10 94346287 94346790 -45969975 - MLT1D LTR MaLR 0 505 3 216 67 0 0 chr10 94347413 94347443 -45969322 + (GA)n Simple_repeat Simple_repeat 1 30 0 1765 157 29 0 chr10 94347443 94347717 -45969048 - AluJb SINE Alu -30 282 1 244 250 44 15 chr10 94347746 94347814 -45968951 + L2 LINE L2 3096 3165 -107 23 54 0 0 chr10 94348317 94348354 -45968411 + AT_rich Low_complexity Low_complexity 1 37 0 697 284 127 41 chr10 94348636 94349178 -45967587 - L1ME3A LINE L1 -222 6017 5429 1654 283 107 64 chr10 94349225 94349633 -45967132 - L1ME3A LINE L1 -840 5375 4986 2326 96 0 3 chr10 94349633 94349936 -45966829 - AluSq SINE Alu -11 302 1 1654 283 107 64 chr10 94349936 94350582 -45966183 - L1ME3A LINE L1 -1229 4986 4370 2014 22 22 0 chr10 94350582 94350811 -45965954 + L1PA2 LINE L1 5921 6154 -1 1654 283 107 64 chr10 94350811 94350832 -45965933 - L1ME3A LINE L1 -1845 4370 4351 2183 90 4 0 chr10 94350832 94351111 -45965654 + AluSq SINE Alu 12 291 -22 1654 283 107 64 chr10 94351111 94351150 -45965615 - L1ME3A LINE L1 -1864 4351 4315 261 0 0 0 chr10 94351150 94351179 -45965586 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1654 283 107 64 chr10 94351179 94352789 -45963976 - L1ME3A LINE L1 -1900 4315 2529 976 162 0 0 chr10 94352961 94353157 -45963608 - FRAM SINE Alu 0 195 1 544 268 42 11 chr10 94353693 94353899 -45962866 - L1ME3A LINE L1 -855 1721 1505 1520 204 87 73 chr10 94353900 94354582 -45962183 - Charlie7 DNA MER1_type 0 2612 1922 5297 97 36 0 chr10 94354601 94355342 -45961423 + L1PB1 LINE L1 5381 6148 -3 335 291 39 10 chr10 94355470 94355573 -45961192 + MIR3 SINE MIR 82 187 -21 361 342 25 0 chr10 94355643 94355801 -45960964 + L1MC4a LINE L1 5764 5925 -1883 2144 130 0 0 chr10 94355986 94356278 -45960487 + AluSx SINE Alu 1 292 -20 317 146 11 34 chr10 94356314 94356403 -45960362 + (TA)n Simple_repeat Simple_repeat 2 88 0 1902 197 0 78 chr10 94356532 94356953 -45959812 - MLT1B LTR MaLR 0 390 3 197 300 83 8 chr10 94357226 94357346 -45959419 + L3 LINE CR1 1314 1442 -135 22 56 0 0 chr10 94358470 94358506 -45958259 + AT_rich Low_complexity Low_complexity 1 36 0 286 128 0 0 chr10 94358522 94358561 -45958204 - U6 snRNA snRNA 0 107 69 657 286 55 5 chr10 94358796 94358995 -45957770 + MIR SINE MIR 4 212 -50 977 290 109 19 chr10 94359708 94360084 -45956681 + LTR16A LTR ERVL 25 434 -16 252 0 0 0 chr10 94360763 94360791 -45955974 + (CA)n Simple_repeat Simple_repeat 2 29 0 305 280 87 65 chr10 94360954 94361169 -45955596 - L2 LINE L2 -167 3105 2881 1655 223 25 33 chr10 94361169 94361568 -45955197 + MSTD LTR MaLR 1 396 0 305 280 87 65 chr10 94361568 94361627 -45955138 - L2 LINE L2 -391 2881 2825 495 229 55 9 chr10 94361935 94362044 -45954721 - MER81 DNA DNA 0 114 1 2861 104 3 3 chr10 94362289 94362653 -45954112 - THE1B LTR MaLR 0 364 1 11184 102 33 35 chr10 94362653 94364236 -45952529 - THE1B-int LTR MaLR 0 1580 2 2905 83 11 6 chr10 94364237 94364599 -45952166 - THE1B LTR MaLR 0 364 1 689 264 95 78 chr10 94364854 94365316 -45951449 + MLT1J LTR MaLR 4 473 -38 429 209 33 0 chr10 94366560 94366651 -45950114 + MER53 DNA DNA 96 189 0 1758 167 33 3 chr10 94367648 94367977 -45948788 - AluJo SINE Alu 0 340 3 364 371 62 58 chr10 94368672 94368899 -45947866 + L2 LINE L2 2818 3049 -223 755 207 20 66 chr10 94368899 94369097 -45947668 - MER5A DNA MER1_type 0 189 1 364 371 62 58 chr10 94369097 94369303 -45947462 + L2 LINE L2 3049 3253 -19 404 254 75 22 chr10 94369683 94369817 -45946948 + MIR SINE MIR 21 161 -101 723 276 50 50 chr10 94369825 94369972 -45946793 + MIR SINE MIR 2 151 -111 380 215 13 0 chr10 94369972 94370051 -45946714 - MER116 DNA Mariner 0 80 1 723 276 50 50 chr10 94370051 94370164 -45946601 + MIR SINE MIR 150 262 0 327 184 40 0 chr10 94370509 94370585 -45946180 - MER116 DNA Mariner 0 80 2 252 144 67 89 chr10 94370653 94370743 -45946022 + HsTC2 DNA Tc2 29 1834 -64 526 189 110 43 chr10 94370814 94370978 -45945787 + LTR33A LTR ERVL 343 517 -6 352 354 82 46 chr10 94371090 94371597 -45945168 - L2 LINE L2 -5 3267 2743 3889 104 41 2 chr10 94371710 94372217 -45944548 - MER1A DNA MER1_type 0 527 1 513 372 111 24 chr10 94372238 94372913 -45943852 - L2 LINE L2 -1 3271 2537 1776 149 0 4 chr10 94373406 94373688 -45943077 + AluJb SINE Alu 25 305 0 2114 132 10 0 chr10 94373698 94374002 -45942763 + AluSx SINE Alu 1 307 -5 750 178 8 8 chr10 94374022 94374140 -45942625 + FLAM_C SINE Alu 1 118 -15 899 208 69 20 chr10 94374171 94374416 -45942349 - Charlie8 DNA MER1_type -2160 257 1 1059 299 61 39 chr10 94374797 94375438 -45941327 + L1MC4a LINE L1 5267 5921 -1887 231 196 84 0 chr10 94375579 94375686 -45941079 + (TA)n Simple_repeat Simple_repeat 2 117 0 1898 121 0 0 chr10 94375697 94375954 -45940811 - AluSx SINE Alu -17 295 39 225 267 0 67 chr10 94376672 94376762 -45940003 - L2 LINE L2 0 3272 3189 356 247 12 0 chr10 94376902 94376983 -45939782 + MER103 DNA DNA 66 147 -19 391 268 242 16 chr10 94378181 94378491 -45938274 + L1ME3A LINE L1 5506 5885 -285 21 57 0 0 chr10 94378811 94378846 -45937919 + AT_rich Low_complexity Low_complexity 1 35 0 332 232 0 0 chr10 94378872 94378941 -45937824 - L1ME2 LINE L1 -93 6071 6003 2233 107 0 0 chr10 94378962 94379251 -45937514 + AluSx SINE Alu 15 303 -9 607 320 102 47 chr10 94379448 94380007 -45936758 - L2 LINE L2 -1002 2312 1723 506 182 193 34 chr10 94380248 94380400 -45936365 + MER5A DNA MER1_type 4 183 -6 244 308 23 81 chr10 94380976 94381148 -45935617 - MER5A DNA MER1_type -24 165 4 188 350 94 5 chr10 94381416 94381619 -45935146 + L2 LINE L2 1773 1993 -1321 786 238 17 33 chr10 94381865 94382046 -45934719 - MER45A DNA AcHobo 0 178 1 195 275 132 0 chr10 94383437 94383528 -45933237 + L2 LINE L2 2560 2662 -652 11321 74 8 1 chr10 94383888 94385490 -45931275 + L1P3 LINE L1 3875 5489 -665 4887 36 0 0 chr10 94385489 94386094 -45930671 + L1PA4 LINE L1 2793 3397 -2749 * 17693 38 7 1 chr10 94386094 94388895 -45927870 + L1PA4 LINE L1 3353 6154 -1 209 306 0 0 chr10 94388895 94388944 -45927821 + L2 LINE L2 2995 3043 -229 383 324 49 7 chr10 94388970 94389112 -45927653 + MIR SINE MIR 3 150 -112 1451 155 69 0 chr10 94389167 94389399 -45927366 - AluSq SINE Alu -48 265 18 204 40 0 0 chr10 94389781 94389806 -45926959 + (TA)n Simple_repeat Simple_repeat 2 26 0 734 262 18 36 chr10 94389822 94390043 -45926722 - MIR SINE MIR -15 247 31 481 184 144 115 chr10 94390750 94390856 -45925909 - MER5A DNA MER1_type -2 187 73 781 181 9 0 chr10 94390856 94390972 -45925793 - FLAM_C SINE Alu -16 117 1 481 184 144 115 chr10 94390972 94391039 -45925726 - MER5A DNA MER1_type -116 73 9 1289 253 35 16 chr10 94391266 94391638 -45925127 - MLT1J LTR MaLR -105 406 28 222 277 0 0 chr10 94392267 94392314 -45924451 - L2 LINE L2 -16 3256 3210 2706 162 42 26 chr10 94393309 94393803 -45922962 + L1MC1 LINE L1 5819 6320 -13 350 172 138 121 chr10 94395678 94395852 -45920913 + MLT1K LTR MaLR 394 570 -18 1709 172 0 24 chr10 94396531 94396860 -45919905 + AluJo SINE Alu 1 322 0 483 287 72 74 chr10 94396921 94397325 -45919440 + LTR67 LTR ERVL 105 507 -50 273 180 30 150 chr10 94397744 94397844 -45918921 + MER94 DNA DNA 5 92 -42 387 279 99 25 chr10 94400814 94400975 -45915790 + MIR3 SINE MIR 31 203 -5 * 532 306 74 56 chr10 94400949 94401273 -45915492 + L2 LINE L2 2512 2841 -473 426 292 0 15 chr10 94402107 94402237 -45914528 + MIR SINE MIR 8 135 -127 1986 148 0 10 chr10 94402586 94402891 -45913874 - AluJb SINE Alu -10 302 1 1972 151 0 0 chr10 94403067 94403374 -45913391 + AluSx SINE Alu 1 307 0 1171 193 79 25 chr10 94403808 94404104 -45912661 - MLT1G3 LTR MaLR 0 555 228 426 198 9 45 chr10 94404099 94404210 -45912555 - MLT1G3 LTR MaLR -473 117 11 * 2633 204 65 21 chr10 94404529 94405064 -45911701 - MLT1F1 LTR MaLR -8 559 1 1543 214 62 6 chr10 94406985 94407308 -45909457 - MER58B DNA MER1_type 0 341 1 432 274 32 32 chr10 94407577 94407701 -45909064 + L2 LINE L2 3147 3270 -2 2300 98 0 9 chr10 94407731 94408046 -45908719 - AluSx SINE Alu 0 312 1 361 341 131 5 chr10 94409516 94409730 -45907035 + MIR3 SINE MIR 8 246 -16 508 213 251 6 chr10 94409782 94409965 -45906800 - MIR SINE MIR -16 246 19 294 267 95 26 chr10 94410151 94410267 -45906498 - MIR SINE MIR -23 239 116 26 0 0 0 chr10 94414257 94414283 -45902482 + AT_rich Low_complexity Low_complexity 1 26 0 2892 7 0 0 chr10 94414598 94414908 -45901857 - AluYb8 SINE Alu -8 310 1 288 338 47 2 chr10 94416136 94416279 -45900486 + MIR SINE MIR 9 155 -66 405 311 66 25 chr10 94418019 94418215 -45898550 + MIR SINE MIR 52 255 -7 227 203 162 14 chr10 94418291 94418365 -45898400 + L1ME LINE L1 5718 5802 -319 22 70 0 0 chr10 94418900 94418943 -45897822 + AT_rich Low_complexity Low_complexity 1 43 0 378 306 50 19 chr10 94418961 94419121 -45897644 - L1ME4a LINE L1 -26 6095 5931 465 244 17 64 chr10 94420407 94420579 -45896186 + L2 LINE L2 2703 2866 -448 312 347 41 0 chr10 94420645 94420766 -45895999 - LTR16A LTR ERVL -323 127 2 404 333 82 31 chr10 94420844 94421039 -45895726 + L2 LINE L2 3063 3267 -5 288 77 0 0 chr10 94421553 94421592 -45895173 + (T)n Simple_repeat Simple_repeat 1 39 0 906 213 11 0 chr10 94421597 94421771 -45894994 + MER5B DNA MER1_type 3 178 0 180 0 0 0 chr10 94421966 94421986 -45894779 + (T)n Simple_repeat Simple_repeat 1 20 0 551 167 61 18 chr10 94422641 94422755 -45894010 + MER3 DNA MER1_type 91 209 0 559 297 35 103 chr10 94423622 94424077 -45892688 + L2 LINE L2 2890 3313 0 315 242 10 61 chr10 94425352 94425451 -45891314 + HAL1b LINE L1 814 907 -441 473 279 125 14 chr10 94425502 94425710 -45891055 + HAL1 LINE L1 2164 2394 -113 212 59 29 0 chr10 94425758 94425792 -45890973 + (TTA)n Simple_repeat Simple_repeat 2 36 0 284 284 14 0 chr10 94425820 94425894 -45890871 - L2 LINE L2 0 3313 3239 1066 178 0 0 chr10 94425896 94426070 -45890695 + AluJb SINE Alu 129 302 -10 890 220 181 46 chr10 94426082 94426604 -45890161 - L2 LINE L2 -86 3227 2626 347 225 33 67 chr10 94426964 94427084 -45889681 - MER5B DNA MER1_type 0 178 63 2605 208 114 86 chr10 94427084 94427285 -45889480 + MER97b DNA MER1_type? 1 195 -858 1586 166 6 54 chr10 94427285 94427598 -45889167 - AluJo SINE Alu -14 298 1 2605 208 114 86 chr10 94427598 94428413 -45888352 + MER97b DNA MER1_type? 195 1046 -7 2282 62 0 10 chr10 94428441 94428732 -45888033 + AluY SINE Alu 24 311 0 2254 99 7 0 chr10 94428759 94429053 -45887712 + AluSx SINE Alu 15 310 -2 510 224 155 0 chr10 94429253 94429369 -45887396 + MER63 DNA MER1_type 1 760 -76 465 232 226 6 chr10 94429927 94430104 -45886661 + MIR SINE MIR 47 262 0 264 268 12 73 chr10 94430412 94430494 -45886271 + L2 LINE L2 3186 3262 -10 702 340 110 17 chr10 94431003 94431486 -45885279 - L2 LINE L2 -798 2516 1989 905 232 93 30 chr10 94431486 94431818 -45884947 - LTR16A LTR ERVL -1 449 97 226 284 95 38 chr10 94431942 94432153 -45884612 - L2 LINE L2 -1407 1907 1685 230 253 0 55 chr10 94432191 94432282 -45884483 + LTR67 LTR ERVL 457 542 -15 2119 234 105 18 chr10 94432288 94432896 -45883869 - MLT2F LTR ERVL -2 661 1 7988 25 0 0 chr10 94433120 94433999 -45882766 + L1PA4 LINE L1 5274 6152 -3 333 320 48 20 chr10 94435375 94435522 -45881243 - MIR3 SINE MIR -25 183 33 207 198 12 35 chr10 94435838 94435924 -45880841 + CT-rich Low_complexity Low_complexity 1 84 0 180 273 0 0 chr10 94436229 94436295 -45880470 + CT-rich Low_complexity Low_complexity 4 69 0 6853 229 82 28 chr10 94437464 94439472 -45877293 + L1MEc LINE L1 37 2152 -4244 237 313 50 40 chr10 94439780 94439978 -45876787 + L2 LINE L2 1332 1531 -1783 2206 102 26 3 chr10 94440120 94440424 -45876341 - AluSq SINE Alu -2 311 1 355 219 114 19 chr10 94440645 94440750 -45876015 - MIR SINE MIR -111 151 37 204 163 0 0 chr10 94441116 94441159 -45875606 + (TATG)n Simple_repeat Simple_repeat 2 44 0 354 226 32 40 chr10 94441202 94441326 -45875439 + L1M4 LINE L1 4696 4818 -1328 2687 116 11 24 chr10 94441444 94441824 -45874941 + THE1C LTR MaLR 1 375 0 449 295 103 33 chr10 94441901 94442444 -45874321 + L1M4 LINE L1 4466 5046 -1100 2113 116 0 3 chr10 94442631 94442939 -45873826 - AluSx SINE Alu 0 307 1 3397 187 42 14 chr10 94443029 94444100 -45872665 - L1PB4 LINE L1 0 6165 5033 1527 165 0 28 chr10 94444154 94444409 -45872356 - AluJo SINE Alu -59 253 6 2134 194 11 5 chr10 94444414 94444853 -45871912 - L1PB4 LINE L1 -1101 5045 4604 1304 158 0 5 chr10 94444853 94445094 -45871671 - AluSg/x SINE Alu 0 318 79 5537 206 34 11 chr10 94445100 94446383 -45870382 - L1PB4 LINE L1 -2184 3962 2650 476 256 0 62 chr10 94448053 94448196 -45868569 + MIR SINE MIR 113 247 -15 2855 143 5 23 chr10 94448196 94448630 -45868135 + MSTB LTR MaLR 1 426 0 476 256 0 62 chr10 94448630 94448646 -45868119 + MIR SINE MIR 247 262 0 429 248 184 7 chr10 94448660 94448801 -45867964 + MIR SINE MIR 49 214 -48 276 330 19 19 chr10 94449917 94450023 -45866742 + MIR SINE MIR 8 113 -149 377 305 0 0 chr10 94450086 94450181 -45866584 - MIR SINE MIR -51 211 117 2073 109 4 0 chr10 94450479 94450754 -45866011 - AluSg SINE Alu -12 298 23 189 195 0 0 chr10 94450824 94450865 -45865900 + (CA)n Simple_repeat Simple_repeat 2 42 0 2712 139 44 2 chr10 94451259 94451668 -45865097 - MSTA LTR MaLR -2 426 1 9718 172 38 4 chr10 94451668 94453264 -45863501 - MSTA-int LTR MaLR 0 1651 2 2534 150 46 12 chr10 94453266 94453679 -45863086 - MSTA LTR MaLR -1 427 1 393 307 92 74 chr10 94453802 94454085 -45862680 - L2 LINE L2 0 3272 2985 443 240 240 7 chr10 94454095 94454241 -45862524 + MER5A DNA MER1_type 10 189 0 184 383 0 11 chr10 94454254 94454348 -45862417 - L2 LINE L2 -290 2982 2890 2754 113 8 5 chr10 94455183 94455555 -45861210 - THE1C LTR MaLR 0 375 3 10007 101 35 71 chr10 94455557 94457197 -45859568 - THE1C-int LTR MaLR 0 1580 1 2853 112 5 5 chr10 94457197 94457572 -45859193 - THE1C LTR MaLR 0 375 1 424 256 83 0 chr10 94457729 94457850 -45858915 - L2 LINE L2 -25 3288 3158 260 318 16 39 chr10 94457890 94458019 -45858746 + LTR16B LTR ERVL 34 159 -305 721 124 44 29 chr10 94458057 94458194 -45858571 + MER53 DNA DNA 1 139 -50 1401 143 42 38 chr10 94458194 94458459 -45858306 + AluJb SINE Alu 1 266 -46 538 316 73 9 chr10 94458459 94458677 -45858088 + HERV16 LTR ERVL 2 233 -4763 3373 282 104 36 chr10 94458984 94460816 -45855949 + HERV16 LTR ERVL 599 2609 -2387 242 143 0 102 chr10 94461173 94461222 -45855543 + LTR16A LTR ERVL 1 44 -406 1329 203 123 69 chr10 94461435 94461899 -45854866 + MLT1D LTR MaLR 7 495 -10 225 313 22 67 chr10 94462062 94462196 -45854569 - L2 LINE L2 -168 3104 2977 397 298 112 44 chr10 94462989 94463399 -45853366 + Charlie8 DNA MER1_type 1 438 -1979 251 77 51 0 chr10 94464652 94464691 -45852074 - MER97a DNA MER1_type? -715 179 139 6225 80 43 11 chr10 94464733 94466504 -45850261 - L1PA11 LINE L1 0 6174 4346 475 293 63 6 chr10 94466721 94466895 -45849870 - MIR SINE MIR -70 192 9 6657 21 6 0 chr10 94467179 94467901 -45848864 - L1PA3 LINE L1 -3 6152 5427 307 238 204 48 chr10 94468529 94468735 -45848030 - L1ME4a LINE L1 -5 6116 5879 482 276 184 5 chr10 94468919 94469115 -45847650 - MIR SINE MIR -24 238 8 2272 119 0 0 chr10 94469193 94469505 -45847260 - AluSx SINE Alu 0 312 1 389 342 0 0 chr10 94471217 94471337 -45845428 - MIR SINE MIR -115 147 28 1974 192 26 26 chr10 94471477 94471867 -45844898 - MSTD LTR MaLR -6 390 1 213 284 45 0 chr10 94471879 94471946 -45844819 - MER5B DNA MER1_type -105 73 4 1796 117 36 0 chr10 94472280 94472527 -45844238 - AluSx SINE Alu -9 303 48 737 241 6 13 chr10 94472818 94472976 -45843789 + MIR SINE MIR 14 170 -92 180 167 197 0 chr10 94473227 94473293 -45843472 + MIR SINE MIR 180 258 -4 881 195 33 67 chr10 94473892 94474102 -45842663 - MER3 DNA MER1_type -4 205 3 24 53 0 0 chr10 94474914 94474952 -45841813 + AT_rich Low_complexity Low_complexity 1 38 0 400 168 11 21 chr10 94475389 94475484 -45841281 - MER69 DNA AcHobo -26 2500 2407 348 229 0 0 chr10 94475650 94475711 -45841054 - MER69 DNA AcHobo -1165 61 1 305 278 105 19 chr10 94475737 94475899 -45840866 - MIR3 SINE MIR -24 184 9 371 280 206 19 chr10 94475916 94476130 -45840635 + MIR SINE MIR 3 256 -6 192 214 0 0 chr10 94476865 94476907 -45839858 + L2 LINE L2 3270 3311 -2 181 261 0 22 chr10 94476917 94476963 -45839802 - L3 LINE CR1 -1265 312 268 660 280 49 37 chr10 94476984 94477227 -45839538 - MIR SINE MIR -1 261 16 235 200 117 17 chr10 94477669 94477729 -45839036 + MIR SINE MIR 81 146 -116 543 267 108 47 chr10 94477843 94478120 -45838645 + L2 LINE L2 3016 3309 -4 202 322 119 44 chr10 94478148 94478443 -45838322 + L2 LINE L2 2385 2701 -613 856 250 108 56 chr10 94478876 94479164 -45837601 - Charlie2 DNA MER1_type -2479 303 1 722 266 97 26 chr10 94479258 94479484 -45837281 + MIR SINE MIR 21 262 0 208 298 202 0 chr10 94479628 94479722 -45837043 - L2 LINE L2 0 3313 3201 527 281 15 108 chr10 94479952 94480212 -45836553 + L3 LINE CR1 707 942 -635 459 72 29 0 chr10 94480466 94480535 -45836230 - L1PA15 LINE L1 -5 6160 6090 1075 76 0 0 chr10 94480548 94480679 -45836086 - AluSg SINE Alu -179 131 1 32 0 0 0 chr10 94480837 94480869 -45835896 + AT_rich Low_complexity Low_complexity 1 32 0 934 291 118 34 chr10 94481693 94482195 -45834570 + L3 LINE CR1 1029 1572 -5 420 55 0 0 chr10 94482578 94482633 -45834132 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr10 94482711 94482743 -45834022 + AT_rich Low_complexity Low_complexity 1 32 0 414 281 89 35 chr10 94482934 94483137 -45833628 + MIR SINE MIR 31 244 -18 611 176 54 3 chr10 94483161 94483373 -45833392 - MER58B DNA MER1_type 0 341 58 493 243 46 40 chr10 94484029 94484181 -45832584 + L1ME4a LINE L1 5555 5707 -414 324 268 16 24 chr10 94484368 94484491 -45832274 + L1ME4a LINE L1 5831 5952 -169 447 246 14 35 chr10 94484846 94484988 -45831777 + L1ME4a LINE L1 5934 6072 -49 456 224 52 15 chr10 94485236 94485370 -45831395 + LTR33 LTR ERVL 1 139 -382 727 266 74 4 chr10 94485412 94485656 -45831109 + LTR33 LTR ERVL 259 519 -2 968 212 115 55 chr10 94486607 94487008 -45829757 - MLT1H LTR MaLR 0 555 92 2579 50 3 0 chr10 94487008 94487306 -45829459 - AluY SINE Alu -12 299 1 968 212 115 55 chr10 94487306 94487402 -45829363 - MLT1H LTR MaLR -463 92 3 28 29 0 0 chr10 94487547 94487582 -45829183 + AT_rich Low_complexity Low_complexity 1 35 0 1435 158 0 45 chr10 94487729 94487976 -45828789 - AluJb SINE Alu -75 237 2 1339 270 94 18 chr10 94488031 94488730 -45828035 - L1ME3A LINE L1 -219 5951 5195 219 195 0 0 chr10 94489770 94489811 -45826954 + MIR SINE MIR 216 256 -6 5282 187 68 39 chr10 94490823 94491989 -45824776 + Charlie1a DNA MER1_type 4 1283 -1478 1676 170 13 29 chr10 94491989 94492295 -45824470 + AluJo SINE Alu 1 301 -11 5282 187 68 39 chr10 94492295 94492473 -45824292 + Charlie1a DNA MER1_type 1283 1454 -1 838 175 96 0 chr10 94494823 94494989 -45821776 + L1MC3 LINE L1 7603 7784 -1 394 247 37 117 chr10 94494996 94495296 -45821469 - L1ME4a LINE L1 -16 6105 5830 629 72 0 0 chr10 94495299 94495382 -45821383 - Alu SINE Alu -4 307 225 1032 147 0 0 chr10 94495382 94495532 -45821233 - AluSq SINE Alu -160 153 4 323 262 68 0 chr10 94495542 94495645 -45821120 - L1ME4a LINE L1 -2005 5803 5694 2508 54 0 0 chr10 94495647 94495945 -45820820 - AluY SINE Alu -13 298 1 286 259 0 0 chr10 94496176 94496234 -45820531 + L2 LINE L2 3194 3251 -21 516 32 0 0 chr10 94496239 94496301 -45820464 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 677 109 0 9 chr10 94496301 94496411 -45820354 + (GGGGA)n Simple_repeat Simple_repeat 3 111 0 852 214 125 96 chr10 94496688 94497103 -45819662 + MLT1H LTR MaLR 123 549 0 246 62 0 0 chr10 94497219 94497251 -45819514 + (CA)n Simple_repeat Simple_repeat 2 33 0 634 149 103 0 chr10 94497290 94497397 -45819368 + AluJb SINE Alu 78 195 -117 876 293 76 19 chr10 94497416 94497901 -45818864 + L1M4 LINE L1 3854 4366 -1780 309 283 141 0 chr10 94497987 94498079 -45818686 + L2 LINE L2 3199 3303 -10 688 153 27 0 chr10 94498092 94498203 -45818562 + MER81 DNA DNA 1 114 0 1703 192 5 69 chr10 94498811 94499123 -45817642 + MLT1A1 LTR MaLR 1 285 -80 808 189 0 0 chr10 94499123 94499245 -45817520 - FLAM_C SINE Alu -11 122 1 1703 192 5 69 chr10 94499245 94499322 -45817443 + MLT1A1 LTR MaLR 285 365 0 4629 177 50 24 chr10 94499400 94500240 -45816525 + MER21B LTR ERV1 1 862 -1 475 295 87 0 chr10 94500631 94500804 -45815961 - MIR SINE MIR -70 192 5 2148 111 4 0 chr10 94501257 94501571 -45815194 + AluSx SINE Alu 1 315 0 2029 107 3 28 chr10 94501576 94501905 -45814860 + AluSx SINE Alu 1 322 0 32 75 0 0 chr10 94501989 94502056 -45814709 + AT_rich Low_complexity Low_complexity 1 67 0 801 294 117 35 chr10 94502101 94502529 -45814236 - L2 LINE L2 -470 2844 2382 531 235 26 0 chr10 94502666 94502781 -45813984 + MLT1E LTR MaLR 1 118 -475 * 1637 208 63 11 chr10 94502778 94503129 -45813636 + MLT1E LTR MaLR 225 593 0 21 36 0 0 chr10 94503228 94503256 -45813509 + AT_rich Low_complexity Low_complexity 1 28 0 243 288 137 0 chr10 94503343 94503416 -45813349 - MIR SINE MIR -76 132 50 382 373 149 13 chr10 94504279 94504507 -45812258 - L2 LINE L2 -15 3257 2999 4787 159 23 32 chr10 94504566 94505963 -45810802 + L1MB8 LINE L1 4726 6113 -65 1669 155 26 55 chr10 94505963 94506272 -45810493 - AluJo SINE Alu -12 300 1 4787 159 23 32 chr10 94506272 94506338 -45810427 + L1MB8 LINE L1 6113 6178 0 1247 266 109 36 chr10 94506361 94506449 -45810316 + MLT1H LTR MaLR 9 89 -460 2415 111 111 16 chr10 94506449 94506649 -45810116 - MSTA LTR MaLR -4 424 245 207 0 0 0 chr10 94506649 94506672 -45810093 + (GA)n Simple_repeat Simple_repeat 1 23 0 2415 111 111 16 chr10 94506672 94506858 -45809907 - MSTA LTR MaLR -183 245 1 1247 266 109 36 chr10 94506858 94507273 -45809492 + MLT1H LTR MaLR 89 549 0 2226 97 3 3 chr10 94507550 94507840 -45808925 - AluSc SINE Alu -19 290 1 1496 229 52 25 chr10 94507880 94508286 -45808479 + L1MC4a LINE L1 7386 7802 -6 1101 292 106 27 chr10 94508355 94509252 -45807513 - L2 LINE L2 -9 3304 2330 546 298 7 13 chr10 94509773 94509924 -45806841 + MIR SINE MIR 5 154 -108 1867 241 10 3 chr10 94509977 94510363 -45806402 + LTR16A LTR ERVL 62 450 0 343 287 46 0 chr10 94510363 94510471 -45806294 + MIR SINE MIR 150 262 0 196 282 28 14 chr10 94513238 94513309 -45803456 + MIR SINE MIR 49 120 -142 294 267 0 0 chr10 94513434 94513524 -45803241 - L1MC4 LINE L1 -1339 6703 6614 261 0 0 0 chr10 94513530 94513559 -45803206 + (GA)n Simple_repeat Simple_repeat 2 30 0 570 214 104 55 chr10 94513606 94513807 -45802958 + MIR SINE MIR 51 261 -1 391 266 0 84 chr10 94514115 94514269 -45802496 - MER103 DNA DNA -2 164 24 199 267 44 67 chr10 94514609 94514699 -45802066 - L2 LINE L2 -16 3256 3169 284 329 36 12 chr10 94514874 94515041 -45801724 + MIR3 SINE MIR 36 206 -2 699 272 104 0 chr10 94515922 94516124 -45800641 + MIR SINE MIR 37 259 -3 452 214 36 50 chr10 94516138 94516278 -45800487 - MIR SINE MIR -49 213 76 220 298 29 39 chr10 94516747 94516851 -45799914 + MIR3 SINE MIR 81 183 -25 192 383 67 8 chr10 94517435 94517555 -45799210 - L2 LINE L2 -2 3270 3144 196 342 41 8 chr10 94518120 94518222 -45798543 + MIR SINE MIR 17 120 -105 182 222 0 0 chr10 94518219 94518255 -45798510 - MIR SINE MIR -8 254 219 * 1707 179 17 34 chr10 94518276 94518627 -45798138 + MLT1A1 LTR MaLR 10 354 -11 523 293 89 11 chr10 94518635 94518826 -45797939 - MIR SINE MIR -51 211 6 274 341 23 0 chr10 94518842 94518930 -45797835 + MIR3 SINE MIR 113 202 -6 237 316 26 17 chr10 94519070 94519187 -45797578 + L2 LINE L2 2939 3056 -216 526 261 124 4 chr10 94519973 94520247 -45796518 + LTR33A LTR ERVL 119 463 -60 206 32 32 0 chr10 94521252 94521283 -45795482 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 233 259 30 15 chr10 94521792 94521927 -45794838 + (CCCCG)n Simple_repeat Simple_repeat 1 137 0 21 0 0 0 chr10 94521976 94521997 -45794768 + GC_rich Low_complexity Low_complexity 1 21 0 343 304 116 60 chr10 94521998 94522334 -45794431 - L1M2 LINE L1 -5644 1205 851 23 33 0 0 chr10 94522488 94522518 -45794247 + GC_rich Low_complexity Low_complexity 1 30 0 831 250 75 36 chr10 94523648 94523956 -45792809 + L2 LINE L2 2994 3313 0 594 106 106 43 chr10 94524424 94524518 -45792247 - AluJb SINE Alu -20 292 193 22 0 0 0 chr10 94524630 94524652 -45792113 + AT_rich Low_complexity Low_complexity 1 22 0 301 255 161 74 chr10 94524942 94525091 -45791674 - MIR3 SINE MIR -13 195 34 259 278 157 0 chr10 94525173 94525281 -45791484 + L2 LINE L2 3139 3263 -9 479 305 110 25 chr10 94525581 94525817 -45790948 + MIR SINE MIR 6 261 -1 252 254 18 114 chr10 94525834 94525948 -45790817 + MIR3 SINE MIR 83 185 -23 198 250 18 0 chr10 94526928 94526984 -45789781 + L2 LINE L2 3256 3312 -1 2319 109 0 3 chr10 94527568 94527879 -45788886 + AluSg SINE Alu 1 310 0 5397 165 44 12 chr10 94528203 94530119 -45786646 + L1MC1 LINE L1 4143 6111 -222 324 261 45 97 chr10 94530885 94531061 -45785704 - MIR3 SINE MIR -23 185 19 1960 145 21 0 chr10 94531063 94531353 -45785412 + AluSx SINE Alu 1 296 -16 199 238 152 67 chr10 94531905 94532010 -45784755 + MIR SINE MIR 57 170 -92 434 214 34 17 chr10 94532324 94532441 -45784324 - L1ME3A LINE L1 -8 6162 6044 2036 143 7 0 chr10 94533308 94533601 -45783164 + AluSx SINE Alu 1 295 -17 1086 272 109 72 chr10 94533976 94534799 -45781966 + HAL1 LINE L1 117 970 -1537 * 18890 62 3 3 chr10 94534794 94537135 -45779630 - L1P LINE L1 -3796 2350 11 459 213 72 68 chr10 94537318 94537461 -45779304 + HAL1 LINE L1 2283 2429 -78 1976 167 3 0 chr10 94537461 94537772 -45778993 - AluJb SINE Alu 0 312 1 459 213 72 68 chr10 94537772 94537849 -45778916 + HAL1 LINE L1 2429 2504 -3 378 61 0 0 chr10 94537908 94537957 -45778808 + MADE1 DNA Mariner 32 80 0 411 282 32 25 chr10 94538024 94538167 -45778598 - MER5B DNA MER1_type -26 163 10 11037 150 12 19 chr10 94538431 94541269 -45775496 - L1PA13 LINE L1 -6 6157 3257 269 173 0 0 chr10 94541254 94541306 -45775459 - L1 LINE L1 -2533 3613 3562 * 10555 196 43 35 chr10 94541309 94545113 -45771652 - L1PA12 LINE L1 -2662 4922 1 216 158 0 0 chr10 94545605 94545643 -45771122 + (TA)n Simple_repeat Simple_repeat 2 39 0 266 152 0 0 chr10 94545655 94545701 -45771064 + L1MC4 LINE L1 6658 6703 -1339 444 208 228 0 chr10 94546036 94546185 -45770580 - MER5A DNA MER1_type 0 189 7 623 267 0 53 chr10 94546195 94546382 -45770383 - MER5B DNA MER1_type -1 177 1 896 27 0 27 chr10 94547057 94547167 -45769598 - L1PA3 LINE L1 0 6155 6049 1972 86 0 0 chr10 94547169 94547426 -45769339 + L1P LINE L1 20 276 -5870 21 0 0 0 chr10 94547587 94547608 -45769157 + AT_rich Low_complexity Low_complexity 1 21 0 735 275 111 8 chr10 94547945 94548189 -45768576 - L2 LINE L2 -1930 1384 1116 453 322 116 34 chr10 94548210 94548530 -45768235 + L2 LINE L2 2927 3272 0 1971 202 28 3 chr10 94549079 94549435 -45767330 - MLT1A1 LTR MaLR 0 365 1 441 340 57 0 chr10 94549458 94549617 -45767148 + MIR3 SINE MIR 34 201 -7 3430 150 34 4 chr10 94550104 94550638 -45766127 - MER44D DNA MER2_type 0 605 1 342 231 55 0 chr10 94551040 94551147 -45765618 + MIR SINE MIR 71 191 -17 2294 244 104 50 chr10 94551641 94551918 -45764847 - L2 LINE L2 0 3313 3052 2354 238 63 23 chr10 94551918 94552516 -45764249 + MLT1E2 LTR MaLR 1 622 -4 2294 244 104 50 chr10 94552516 94553214 -45763551 - L2 LINE L2 -261 3052 2272 2411 179 42 28 chr10 94553214 94553712 -45763053 + MLT1D LTR MaLR 1 505 0 2294 244 104 50 chr10 94553712 94553852 -45762913 - L2 LINE L2 -1041 2272 2141 1152 228 162 20 chr10 94553854 94554305 -45762460 - L2 LINE L2 -1590 1724 1210 285 146 0 0 chr10 94554517 94554565 -45762200 + (TA)n Simple_repeat Simple_repeat 2 49 0 207 0 0 0 chr10 94554565 94554588 -45762177 + (GA)n Simple_repeat Simple_repeat 2 24 0 557 154 55 0 chr10 94554590 94554681 -45762084 - AluJ SINE Alu -34 278 183 874 121 16 8 chr10 94554690 94554814 -45761951 - AluJ SINE Alu -187 125 1 413 302 42 42 chr10 94554847 94555039 -45761726 - LTR16C LTR ERVL 0 491 300 428 264 125 68 chr10 94555530 94555810 -45760955 + L2 LINE L2 2921 3216 -97 773 114 5 185 chr10 94556883 94557094 -45759671 - Tigger2 DNA MER2_type -1 2717 2545 985 104 7 0 chr10 94557194 94557329 -45759436 - THE1B LTR MaLR -35 329 194 897 218 11 16 chr10 94557539 94557727 -45759038 - MER5A DNA MER1_type -2 187 1 333 218 172 0 chr10 94557752 94557839 -45758926 - MER5B DNA MER1_type -2 176 75 375 312 72 8 chr10 94557938 94558063 -45758702 - L2 LINE L2 -14 3258 3126 821 125 14 42 chr10 94558074 94558218 -45758547 + AluJo SINE Alu 5 144 -168 521 202 149 0 chr10 94558591 94558705 -45758060 + MER20 DNA MER1_type 89 219 0 214 284 28 64 chr10 94558939 94559048 -45757717 + L2 LINE L2 2949 3053 -260 757 196 15 15 chr10 94559172 94559305 -45757460 - FLAM_C SINE Alu 0 133 1 1270 171 40 24 chr10 94559499 94559797 -45756968 + L1MD3 LINE L1 7687 7989 -6 271 256 0 26 chr10 94561589 94561667 -45755098 - MIR3 SINE MIR -1 207 132 224 200 0 55 chr10 94561717 94561772 -45754993 + MER5B DNA MER1_type 2 53 -125 519 191 85 0 chr10 94561797 94561891 -45754874 - FRAM SINE Alu -35 141 40 795 111 9 0 chr10 94562176 94562284 -45754481 - AluSx SINE Alu -74 236 128 2242 76 0 0 chr10 94562288 94562563 -45754202 - L1PA7 LINE L1 -5 6149 5875 930 61 0 0 chr10 94562564 94562678 -45754087 + L1PA7 LINE L1 5766 5879 -275 970 96 16 0 chr10 94562678 94562803 -45753962 - AluSx SINE Alu -180 132 6 736 266 66 26 chr10 94562861 94563151 -45753614 - MLT1I LTR MaLR -109 337 1 2038 112 37 10 chr10 94563535 94563830 -45752935 + AluSx SINE Alu 1 303 -9 2706 162 42 26 chr10 94565658 94566152 -45750613 - L1MC1 LINE L1 -13 6320 5819 222 277 0 0 chr10 94567147 94567194 -45749571 + L2 LINE L2 3210 3256 -16 1289 253 35 16 chr10 94567823 94568195 -45748570 + MLT1J LTR MaLR 28 406 -105 481 184 144 115 chr10 94568422 94568489 -45748276 + MER5A DNA MER1_type 9 73 -116 781 181 9 0 chr10 94568489 94568605 -45748160 + FLAM_C SINE Alu 1 117 -16 481 184 144 115 chr10 94568605 94568711 -45748054 + MER5A DNA MER1_type 73 187 -2 754 275 17 33 chr10 94569399 94569639 -45747126 + MIR SINE MIR 12 247 -15 204 40 0 0 chr10 94569655 94569680 -45747085 + (TA)n Simple_repeat Simple_repeat 1 25 0 1451 155 69 0 chr10 94570062 94570294 -45746471 + AluSq SINE Alu 18 265 -48 383 324 49 7 chr10 94570349 94570491 -45746274 - MIR SINE MIR -112 150 3 209 306 0 0 chr10 94570517 94570566 -45746199 - L2 LINE L2 -229 3043 2995 17693 36 2 17 chr10 94570566 94573972 -45742793 - L1PA4 LINE L1 -1 6154 2793 10509 74 8 1 chr10 94573971 94575573 -45741192 - L1P3 LINE L1 -665 5489 3875 * 190 275 132 0 chr10 94575933 94576024 -45740741 - L2 LINE L2 -652 2662 2560 718 238 17 33 chr10 94577415 94577596 -45739169 + MER45A DNA AcHobo 1 178 0 196 345 94 5 chr10 94577842 94578045 -45738720 - L2 LINE L2 -1321 1993 1773 233 302 35 93 chr10 94578313 94578485 -45738280 + MER5A DNA MER1_type 4 165 -24 501 182 193 34 chr10 94579061 94579213 -45737552 - MER5A DNA MER1_type -6 183 4 630 335 101 32 chr10 94579446 94580013 -45736752 + L2 LINE L2 1707 2312 -1002 2241 107 0 0 chr10 94580210 94580499 -45736266 - AluSx SINE Alu -9 303 15 296 215 0 0 chr10 94580524 94580589 -45736176 + L1ME2 LINE L1 6007 6071 -93 21 57 0 0 chr10 94580615 94580650 -45736115 + AT_rich Low_complexity Low_complexity 1 35 0 285 273 225 15 chr10 94580970 94581237 -45735528 - L1ME3A LINE L1 -285 5885 5563 320 247 12 0 chr10 94582478 94582559 -45734206 - MER103 DNA DNA -19 147 66 239 267 0 67 chr10 94582698 94582788 -45733977 + L2 LINE L2 3189 3272 0 1905 121 0 0 chr10 94583506 94583763 -45733002 + AluSx SINE Alu 39 295 -17 231 196 84 0 chr10 94583774 94583881 -45732884 + (TA)n Simple_repeat Simple_repeat 2 117 0 847 291 59 45 chr10 94584022 94584679 -45732086 - L1MC4a LINE L1 -302 5819 5254 799 212 53 13 chr10 94585044 94585270 -45731495 + Charlie8 DNA MER1_type 1 235 -2182 708 178 8 8 chr10 94585320 94585438 -45731327 - FLAM_C SINE Alu -15 118 1 2140 128 10 0 chr10 94585457 94585761 -45731004 - AluSx SINE Alu -5 307 1 368 341 131 5 chr10 94587230 94587444 -45729321 + MIR3 SINE MIR 8 246 -16 505 213 251 6 chr10 94587496 94587679 -45729086 - MIR SINE MIR -16 246 19 299 267 95 26 chr10 94587865 94587981 -45728784 - MIR SINE MIR -23 239 116 26 0 0 0 chr10 94591971 94591997 -45724768 + AT_rich Low_complexity Low_complexity 1 26 0 2851 7 0 0 chr10 94592312 94592622 -45724143 - AluYb8 SINE Alu -8 310 1 295 338 47 2 chr10 94593849 94593992 -45722773 + MIR SINE MIR 9 155 -66 413 322 61 20 chr10 94595718 94595928 -45720837 + MIR SINE MIR 37 255 -7 22 70 0 0 chr10 94596613 94596656 -45720109 + AT_rich Low_complexity Low_complexity 1 43 0 384 306 50 19 chr10 94596674 94596834 -45719931 - L1ME4a LINE L1 -26 6095 5931 462 244 17 64 chr10 94598120 94598292 -45718473 + L2 LINE L2 2703 2866 -448 279 347 41 0 chr10 94598358 94598479 -45718286 - LTR16A LTR ERVL -323 127 2 409 333 82 31 chr10 94598557 94598752 -45718013 + L2 LINE L2 3063 3267 -5 288 77 0 0 chr10 94599266 94599305 -45717460 + (T)n Simple_repeat Simple_repeat 1 39 0 830 213 11 0 chr10 94599310 94599484 -45717281 + MER5B DNA MER1_type 3 178 0 180 0 0 0 chr10 94599679 94599699 -45717066 + (T)n Simple_repeat Simple_repeat 1 20 0 494 167 61 18 chr10 94600354 94600468 -45716297 + MER3 DNA MER1_type 91 209 0 585 297 35 103 chr10 94601335 94601790 -45714975 + L2 LINE L2 2890 3313 0 317 242 10 61 chr10 94603065 94603164 -45713601 + HAL1b LINE L1 814 907 -441 407 301 0 0 chr10 94603287 94603423 -45713342 + HAL1 LINE L1 2259 2394 -113 212 59 29 0 chr10 94603471 94603505 -45713260 + (TTA)n Simple_repeat Simple_repeat 2 36 0 293 284 14 0 chr10 94603533 94603607 -45713158 - L2 LINE L2 0 3313 3239 1079 178 0 0 chr10 94603609 94603783 -45712982 + AluJb SINE Alu 129 302 -10 889 222 181 46 chr10 94603795 94604317 -45712448 - L2 LINE L2 -86 3227 2626 348 225 33 67 chr10 94604678 94604798 -45711967 - MER5B DNA MER1_type 0 178 63 2206 196 73 99 chr10 94604798 94604998 -45711767 + MER97a DNA MER1_type? 1 205 -848 1610 166 6 54 chr10 94604998 94605311 -45711454 - AluJo SINE Alu -14 298 1 2206 196 73 99 chr10 94605311 94606126 -45710639 + MER97a DNA MER1_type? 205 1046 -7 2269 62 0 10 chr10 94606154 94606445 -45710320 + AluY SINE Alu 24 311 0 2213 99 10 0 chr10 94606472 94606765 -45710000 + AluSx SINE Alu 15 310 -2 459 224 155 0 chr10 94606965 94607081 -45709684 + MER63 DNA MER1_type 1 760 -76 468 232 226 6 chr10 94607639 94607816 -45708949 + MIR SINE MIR 47 262 0 265 268 12 73 chr10 94608124 94608206 -45708559 + L2 LINE L2 3186 3262 -10 725 339 109 16 chr10 94608715 94609199 -45707566 - L2 LINE L2 -798 2516 1988 801 239 95 25 chr10 94609204 94609530 -45707235 - LTR16A LTR ERVL -5 445 97 237 284 99 43 chr10 94609654 94609865 -45706900 - L2 LINE L2 -1407 1907 1685 1877 234 105 18 chr10 94610000 94610608 -45706157 - MLT2F LTR ERVL -2 661 1 7489 25 0 0 chr10 94610832 94611711 -45705054 + L1PA4 LINE L1 5274 6152 -3 344 320 41 14 chr10 94613087 94613234 -45703531 - MIR3 SINE MIR -25 183 33 207 198 12 35 chr10 94613549 94613635 -45703130 + CT-rich Low_complexity Low_complexity 1 84 0 180 273 0 0 chr10 94613940 94614006 -45702759 + CT-rich Low_complexity Low_complexity 4 69 0 6046 231 81 27 chr10 94615175 94617183 -45699582 + L1MEc LINE L1 37 2152 -4244 245 313 50 40 chr10 94617491 94617689 -45699076 + L2 LINE L2 1332 1531 -1783 2207 102 26 3 chr10 94617831 94618135 -45698630 - AluSq SINE Alu -2 311 1 421 229 105 9 chr10 94618356 94618461 -45698304 - MIR SINE MIR -111 151 37 204 163 0 0 chr10 94618827 94618870 -45697895 + (TATG)n Simple_repeat Simple_repeat 2 44 0 324 236 36 9 chr10 94618927 94619037 -45697728 + L1M4 LINE L1 4706 4818 -1328 2504 116 11 24 chr10 94619155 94619535 -45697230 + THE1C LTR MaLR 1 375 0 298 291 108 37 chr10 94619612 94620103 -45696662 + L1M4 LINE L1 4466 4991 -1155 2108 116 0 3 chr10 94620342 94620649 -45696116 - AluSx SINE Alu 0 307 2 206 256 0 0 chr10 94720951 94720994 -45595771 + (TG)n Simple_repeat Simple_repeat 2 44 0 2060 134 3 3 chr10 94721079 94721385 -45595380 + AluSx SINE Alu 1 306 -6 1689 154 50 0 chr10 94721401 94721681 -45595084 + AluJo SINE Alu 9 302 -10 2358 94 0 0 chr10 94721681 94721989 -45594776 + AluSg SINE Alu 1 309 -1 194 268 0 54 chr10 94722044 94722100 -45594665 - MIR SINE MIR -154 108 56 1777 166 10 7 chr10 94724462 94724764 -45592001 + AluJb SINE Alu 1 303 -9 385 297 154 15 chr10 94724892 94725087 -45591678 + L1M4 LINE L1 4018 4239 -1907 1672 159 8 4 chr10 94725409 94725673 -45591092 + AluJb SINE Alu 1 265 -47 1281 167 0 27 chr10 94726293 94726514 -45590251 + AluJo SINE Alu 1 215 -97 2031 143 0 6 chr10 94726564 94726878 -45589887 + AluSx SINE Alu 1 312 0 993 146 0 0 chr10 94727124 94727295 -45589470 - AluSg/x SINE Alu 0 302 132 2213 90 3 7 chr10 94727295 94727595 -45589170 - AluSg1 SINE Alu -10 299 1 1991 120 0 0 chr10 94727595 94727879 -45588886 - AluSx SINE Alu -3 309 26 2060 133 3 3 chr10 94727916 94728225 -45588540 + AluSx SINE Alu 1 309 -3 253 269 17 42 chr10 94728470 94728589 -45588176 + CT-rich Low_complexity Low_complexity 5 120 0 260 160 20 0 chr10 94729080 94729130 -45587635 - MER117 DNA MER1_type -39 158 108 259 184 0 0 chr10 94729152 94729201 -45587564 - MER117 DNA MER1_type -48 149 101 351 255 105 39 chr10 94729380 94729533 -45587232 - MER117 DNA MER1_type -34 163 1 204 339 0 0 chr10 94730815 94730874 -45585891 - L2 LINE L2 0 3272 3214 246 293 10 20 chr10 94730888 94730987 -45585778 + MER81 DNA DNA 13 110 -4 206 118 0 0 chr10 94731455 94731489 -45585276 + (CCCTG)n Simple_repeat Simple_repeat 1 34 0 2256 68 0 0 chr10 94732563 94732872 -45583893 + AluSg SINE Alu 2 310 0 245 304 143 0 chr10 94733063 94733175 -45583590 + MIR SINE MIR 16 143 -119 1861 166 4 120 chr10 94733427 94733597 -45583168 - L1MA4 LINE L1 -14 6286 6098 1937 162 0 6 chr10 94733597 94733911 -45582854 + AluJo SINE Alu 1 312 0 1861 166 4 120 chr10 94733911 94733936 -45582829 - L1MA4 LINE L1 -202 6098 6072 1919 127 3 27 chr10 94733936 94734236 -45582529 + AluSx SINE Alu 1 293 -19 2228 98 3 0 chr10 94734238 94734533 -45582232 + AluSp SINE Alu 1 296 -17 1861 166 4 120 chr10 94734533 94734874 -45581891 - L1MA4 LINE L1 -229 6071 5809 180 219 0 0 chr10 94737855 94737896 -45578869 + (CGTG)n Simple_repeat Simple_repeat 4 44 0 323 236 13 102 chr10 94738475 94738634 -45578131 - MIR SINE MIR -62 146 4 738 123 114 0 chr10 94739198 94739312 -45577453 + FLAM_C SINE Alu 1 127 -6 241 303 13 0 chr10 94739421 94739497 -45577268 + MIR SINE MIR 108 184 -78 278 312 9 0 chr10 94739799 94739908 -45576857 - L2 LINE L2 -371 2942 2833 782 307 152 13 chr10 94740368 94740921 -45575844 - L2 LINE L2 -545 2769 2140 246 276 31 39 chr10 94741392 94741519 -45575246 - MLT1J LTR MaLR -34 477 352 2278 86 3 0 chr10 94741596 94741886 -45574879 - AluSp SINE Alu -22 291 1 361 278 9 37 chr10 94741895 94742003 -45574762 - MLT1J LTR MaLR -194 317 213 1962 147 0 16 chr10 94742229 94742541 -45574224 - AluJo SINE Alu 0 312 6 2063 111 7 3 chr10 94742556 94742854 -45573911 - AluSx SINE Alu -13 299 1 2366 64 3 0 chr10 94742880 94743175 -45573590 + AluY SINE Alu 1 296 -15 2377 72 0 0 chr10 94743181 94743495 -45573270 + AluSp SINE Alu 4 317 0 2154 104 3 13 chr10 94744272 94744571 -45572194 + AluSx SINE Alu 2 297 -15 1579 179 16 19 chr10 94744579 94744887 -45571878 + AluJb SINE Alu 1 307 -5 2217 83 3 38 chr10 94745308 94745444 -45571321 + AluSx SINE Alu 1 140 -172 2162 126 0 0 chr10 94745444 94745753 -45571012 + AluSg SINE Alu 1 309 -1 2217 83 3 38 chr10 94745753 94745930 -45570835 + AluSx SINE Alu 140 303 -9 930 147 0 0 chr10 94745966 94746109 -45570656 + FRAM SINE Alu 23 165 -11 457 304 66 11 chr10 94746241 94746422 -45570343 - MIR SINE MIR -52 210 20 191 375 59 29 chr10 94746514 94746650 -45570115 + MIR SINE MIR 109 248 -14 1919 138 3 3 chr10 94746660 94746951 -45569814 + AluJo SINE Alu 1 291 -21 823 164 8 0 chr10 94747024 94747152 -45569613 + FLAM_C SINE Alu 1 129 -14 274 308 53 12 chr10 94747287 94747456 -45569309 + L1MC/D LINE L1 5587 5762 -2046 35 24 0 0 chr10 94747457 94747499 -45569266 + AT_rich Low_complexity Low_complexity 1 42 0 903 123 0 7 chr10 94747499 94747637 -45569128 + FRAM SINE Alu 22 158 -18 2248 97 3 0 chr10 94747645 94747943 -45568822 + AluSc SINE Alu 1 299 -10 1964 107 28 14 chr10 94748058 94748349 -45568416 + AluSx SINE Alu 1 295 -17 2326 79 13 0 chr10 94748361 94748666 -45568099 + AluY SINE Alu 1 309 -2 1296 155 0 5 chr10 94748780 94748986 -45567779 + AluSg/x SINE Alu 82 286 -24 298 248 87 47 chr10 94749548 94749697 -45567068 - LTR33 LTR ERVL -354 167 13 265 272 171 8 chr10 94750543 94750670 -45566095 - MIR SINE MIR -62 146 16 285 321 0 0 chr10 94750780 94750861 -45565904 - MIR SINE MIR -110 152 72 383 201 54 0 chr10 94753385 94753490 -45563275 + MIR SINE MIR 25 139 -69 350 200 0 27 chr10 94753524 94753539 -45563226 + AluSg/x SINE Alu 120 134 -168 898 132 0 0 chr10 94753539 94753660 -45563105 + FLAM_C SINE Alu 5 125 -8 350 200 0 27 chr10 94753660 94753719 -45563046 + AluSg/x SINE Alu 134 192 -110 1237 164 147 0 chr10 94753719 94753950 -45562815 + AluJo SINE Alu 17 281 -31 1706 129 54 14 chr10 94753950 94754229 -45562536 + AluSx SINE Alu 8 297 -15 540 246 67 50 chr10 94754273 94754452 -45562313 + MIR SINE MIR 14 195 -67 2393 49 0 64 chr10 94754510 94754836 -45561929 - AluSq SINE Alu -8 305 1 240 325 65 24 chr10 94756807 94756930 -45559835 + MIR SINE MIR 112 239 -23 480 262 143 24 chr10 94757057 94757267 -45559498 + MIR SINE MIR 28 262 0 183 80 0 0 chr10 94757521 94757546 -45559219 + (T)n Simple_repeat Simple_repeat 1 25 0 2216 99 0 10 chr10 94757550 94757862 -45558903 - AluSc SINE Alu 0 309 1 1568 157 31 11 chr10 94757865 94758126 -45558639 - AluJo SINE Alu -22 290 25 3330 183 64 37 chr10 94758136 94758184 -45558581 - L1MB5 LINE L1 0 6174 6129 2296 93 0 0 chr10 94758184 94758484 -45558281 + AluY SINE Alu 1 300 -11 3330 183 64 37 chr10 94758484 94758608 -45558157 - L1MB5 LINE L1 -45 6129 6010 1700 228 53 97 chr10 94758608 94758958 -45557807 - LTR9 LTR ERV1 0 612 301 2068 113 30 3 chr10 94758958 94759260 -45557505 - AluSg SINE Alu 0 310 1 1700 228 53 97 chr10 94759260 94759549 -45557216 - LTR9 LTR ERV1 -311 301 1 3330 183 64 37 chr10 94759549 94759774 -45556991 - L1MB5 LINE L1 -164 6010 5792 1693 168 36 7 chr10 94759774 94760077 -45556688 - AluJb SINE Alu 0 312 1 3330 183 64 37 chr10 94760077 94760371 -45556394 - L1MB5 LINE L1 -382 5792 5507 1679 138 55 61 chr10 94760371 94760563 -45556202 - AluSx SINE Alu -3 309 118 2224 113 0 0 chr10 94760563 94760872 -45555893 - AluSc SINE Alu 0 309 1 1679 138 55 61 chr10 94760872 94760990 -45555775 - AluSx SINE Alu -194 118 1 3330 183 64 37 chr10 94760990 94761003 -45555762 - L1MB5 LINE L1 -667 5507 5496 213 39 0 0 chr10 94761003 94761029 -45555736 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3330 183 64 37 chr10 94761029 94761209 -45555556 - L1MB5 LINE L1 -678 5496 5260 1617 144 10 53 chr10 94761256 94761555 -45555210 + AluJo SINE Alu 16 301 -11 699 70 0 0 chr10 94761566 94761652 -45555113 + AluY SINE Alu 1 86 -224 884 145 0 33 chr10 94761746 94761898 -45554867 + AluJo SINE Alu 1 147 -165 2410 61 0 0 chr10 94762320 94762615 -45554150 - AluY SINE Alu -16 295 1 1110 129 18 0 chr10 94762632 94762803 -45553962 + AluJb SINE Alu 120 293 -19 2944 192 62 33 chr10 94762842 94763456 -45553309 - LTR27 LTR ERV1 -2 634 3 292 341 123 28 chr10 94763466 94763677 -45553088 + L2 LINE L2 3040 3270 -2 223 390 21 0 chr10 94763766 94763861 -45552904 - L2 LINE L2 -14 3299 3203 1923 139 21 3 chr10 94763892 94764180 -45552585 + AluSx SINE Alu 1 293 -19 2261 92 7 10 chr10 94764180 94764485 -45552280 + AluSg SINE Alu 1 304 -6 977 103 0 29 chr10 94764485 94764621 -45552144 + AluJo/FLAM SINE Alu 2 133 -169 2472 57 0 3 chr10 94764621 94764921 -45551844 + AluY SINE Alu 1 299 -12 1748 149 13 30 chr10 94764928 94765229 -45551536 + AluJb SINE Alu 1 296 -16 667 274 118 22 chr10 94765295 94765653 -45551112 + L1M4 LINE L1 2647 3042 -3104 2412 67 7 0 chr10 94765653 94765952 -45550813 + AluY SINE Alu 1 301 -10 667 274 118 22 chr10 94765952 94765969 -45550796 + L1M4 LINE L1 3042 3056 -3090 1545 186 0 11 chr10 94765972 94766247 -45550518 + AluJo SINE Alu 21 292 -20 1291 103 25 39 chr10 94766249 94766452 -45550313 - AluY SINE Alu -9 302 103 829 248 83 9 chr10 94766526 94766853 -45549912 + L1M4 LINE L1 3077 3427 -2719 500 314 64 0 chr10 94766914 94767070 -45549695 - L2 LINE L2 -210 3062 2897 2276 90 17 0 chr10 94767423 94767724 -45549041 - AluSq SINE Alu -7 306 1 267 263 26 13 chr10 94767731 94767807 -45548958 - MIR SINE MIR -105 157 81 2214 110 0 3 chr10 94767966 94768276 -45548489 + AluSc SINE Alu 1 309 0 279 200 0 50 chr10 94769123 94769203 -45547562 + C-rich Low_complexity Low_complexity 2 77 0 864 130 0 22 chr10 94769230 94769368 -45547397 - FLAM_C SINE Alu 0 143 9 373 260 39 8 chr10 94769377 94769504 -45547261 + L2 LINE L2 2891 3021 -251 410 181 145 0 chr10 94769505 94769588 -45547177 + FLAM_C SINE Alu 40 134 -9 746 81 61 0 chr10 94769604 94769703 -45547062 + AluSg/x SINE Alu 82 186 -124 276 146 0 0 chr10 94769703 94769786 -45546979 + Alu SINE Alu 242 324 0 1993 137 20 3 chr10 94769837 94770136 -45546629 + AluSx SINE Alu 1 304 -8 192 291 105 35 chr10 94770176 94770262 -45546503 - MIR SINE MIR -94 168 77 457 209 93 29 chr10 94770775 94770947 -45545818 - MLT1K LTR MaLR -58 530 348 357 239 109 0 chr10 94770948 94771040 -45545725 - MIR SINE MIR -103 159 58 2081 114 17 0 chr10 94771109 94771407 -45545358 - AluSq SINE Alu -10 303 1 1417 187 37 50 chr10 94771407 94771607 -45545158 - AluJo SINE Alu -6 296 100 1952 148 3 10 chr10 94771607 94771742 -45545023 + AluSx SINE Alu 1 135 -177 2784 25 0 0 chr10 94771742 94772059 -45544706 + AluYb8 SINE Alu 1 317 -1 1952 148 3 10 chr10 94772059 94772221 -45544544 + AluSx SINE Alu 135 296 -16 1417 187 37 50 chr10 94772221 94772319 -45544446 - AluJo SINE Alu -202 100 2 907 245 62 11 chr10 94772561 94772872 -45543893 - L2 LINE L2 -247 3066 2738 908 143 0 0 chr10 94772984 94773117 -45543648 + AluJo/FLAM SINE Alu 1 133 -169 1258 167 0 5 chr10 94773118 94773334 -45543431 - AluJo SINE Alu -13 299 85 491 155 0 0 chr10 94773334 94773405 -45543360 - AluSc SINE Alu -61 248 178 1656 106 4 8 chr10 94773405 94773641 -45543124 - AluSx SINE Alu -77 235 1 2096 83 10 26 chr10 94773649 94773951 -45542814 - AluY SINE Alu -14 297 1 24 0 0 0 chr10 94773955 94773979 -45542786 + AT_rich Low_complexity Low_complexity 1 24 0 752 130 0 58 chr10 94773999 94774115 -45542650 + AluJb SINE Alu 174 282 -30 2252 92 0 3 chr10 94774115 94774419 -45542346 - AluSx SINE Alu -9 303 1 752 130 0 58 chr10 94774419 94774440 -45542325 + AluJb SINE Alu 282 303 -9 1089 259 64 33 chr10 94774859 94775083 -45541682 - MLT1K LTR MaLR -24 564 348 2186 115 16 0 chr10 94775083 94775388 -45541377 - AluSx SINE Alu -2 310 1 1649 171 9 65 chr10 94775389 94775574 -45541191 - AluSx SINE Alu -8 304 143 2211 107 0 0 chr10 94775574 94775883 -45540882 - AluY SINE Alu -2 309 1 813 184 0 7 chr10 94775883 94776019 -45540746 - AluSq/x SINE Alu -178 135 1 1089 259 64 33 chr10 94776019 94776182 -45540583 - MLT1K LTR MaLR -239 349 163 181 0 0 0 chr10 94776546 94776566 -45540199 + (TTTA)n Simple_repeat Simple_repeat 3 144 0 2076 113 0 0 chr10 94776566 94776859 -45539906 - AluSx SINE Alu -1 312 1 1552 157 35 14 chr10 94776865 94777152 -45539613 - AluJo SINE Alu -19 293 1 881 136 0 36 chr10 94777152 94777292 -45539473 - AluJo SINE Alu -177 135 1 288 137 0 0 chr10 94777298 94777349 -45539416 + (TG)n Simple_repeat Simple_repeat 2 52 0 380 206 0 0 chr10 94777353 94777421 -45539344 - L1MC4 LINE L1 -1339 6703 6636 559 105 0 0 chr10 94777422 94777498 -45539267 - Alu SINE Alu -11 300 225 1421 96 0 0 chr10 94777498 94777685 -45539080 - AluSc SINE Alu -40 269 83 1914 108 0 0 chr10 94777685 94777989 -45538776 + AluSg SINE Alu 30 333 0 2030 130 13 0 chr10 94778005 94778313 -45538452 + AluSx SINE Alu 1 312 0 375 296 24 65 chr10 94778530 94778699 -45538066 - MIR SINE MIR -12 250 89 314 289 78 16 chr10 94778704 94778832 -45537933 - MER91B DNA MER1_type -52 138 3 798 67 0 0 chr10 94778981 94778992 -45537773 + (TG)n Simple_repeat Simple_repeat 1 11 -413 2209 87 3 3 chr10 94778992 94779292 -45537473 - AluSp SINE Alu -13 300 1 798 67 0 0 chr10 94779292 94779300 -45537465 + (TG)n Simple_repeat Simple_repeat 10 424 0 798 67 0 0 chr10 94779300 94779405 -45537360 + (TG)n Simple_repeat Simple_repeat 2 106 0 2315 80 0 3 chr10 94779440 94779739 -45537026 - AluSx SINE Alu -14 298 1 339 273 18 161 chr10 94780114 94780307 -45536458 + L2 LINE L2 2946 3165 -107 2222 94 0 10 chr10 94780307 94780615 -45536150 + AluSg SINE Alu 1 305 -5 2480 56 0 0 chr10 94780615 94780917 -45535848 + AluY SINE Alu 1 302 -9 2346 97 0 0 chr10 94780918 94781226 -45535539 + AluSc SINE Alu 1 308 -1 339 273 18 161 chr10 94781226 94781315 -45535450 + L2 LINE L2 3163 3190 -82 243 298 121 40 chr10 94781451 94781575 -45535190 - L2 LINE L2 -1 3271 3138 2209 80 0 33 chr10 94781634 94781935 -45534830 - AluSx SINE Alu -13 299 9 2376 77 0 6 chr10 94781942 94782255 -45534510 - AluY SINE Alu 0 311 1 1864 148 10 10 chr10 94782257 94782560 -45534205 - AluJo SINE Alu -9 303 1 2025 140 3 0 chr10 94782603 94782903 -45533862 + AluSx SINE Alu 1 301 -11 1831 149 30 0 chr10 94783696 94783997 -45532768 + AluSq SINE Alu 2 311 -2 1779 109 86 4 chr10 94784121 94784388 -45532377 - AluSx SINE Alu -17 295 7 317 305 55 61 chr10 94784551 94784879 -45531886 - L2 LINE L2 -528 2786 2461 240 272 37 0 chr10 94784939 94785020 -45531745 - L2 LINE L2 -1020 2294 2211 2225 89 16 0 chr10 94785199 94785502 -45531263 - AluSx SINE Alu -4 308 1 936 189 0 18 chr10 94785532 94785701 -45531064 + AluJb SINE Alu 131 296 -16 1064 123 0 23 chr10 94785877 94786048 -45530717 - AluJo SINE Alu -21 291 125 22 0 0 0 chr10 94786048 94786070 -45530695 + AT_rich Low_complexity Low_complexity 1 22 0 1023 113 11 43 chr10 94786075 94786260 -45530505 - AluSq SINE Alu -1 312 134 1949 86 36 50 chr10 94786260 94786561 -45530204 - AluSx SINE Alu -15 297 1 1718 114 37 63 chr10 94786561 94786710 -45530055 - AluSq SINE Alu -22 291 152 1791 154 31 0 chr10 94786710 94786996 -45529769 - AluSq SINE Alu -18 295 1 1718 114 37 63 chr10 94786996 94787145 -45529620 - AluSq SINE Alu -161 152 1 1749 188 31 55 chr10 94787145 94787381 -45529384 - L1MB3 LINE L1 -123 6060 5820 2044 103 3 42 chr10 94787381 94787692 -45529073 + AluSp SINE Alu 4 302 -11 2398 80 0 0 chr10 94787697 94788008 -45528757 - AluSx SINE Alu -1 311 1 1749 188 31 55 chr10 94788008 94788181 -45528584 - L1MB3 LINE L1 -367 5816 5655 280 302 135 0 chr10 94788289 94788415 -45528350 - MIR SINE MIR -80 182 40 2011 108 27 0 chr10 94788561 94788857 -45527908 - AluSx SINE Alu -4 308 5 653 255 65 20 chr10 94788900 94789100 -45527665 - MIR SINE MIR -21 241 33 909 160 7 0 chr10 94790112 94790262 -45526503 + FRAM SINE Alu 7 157 -19 2389 74 3 0 chr10 94790264 94790573 -45526192 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr10 94791125 94791153 -45525612 + GC_rich Low_complexity Low_complexity 1 28 0 215 103 26 0 chr10 94791537 94791576 -45525189 + (CGG)n Simple_repeat Simple_repeat 2 41 0 699 50 8 50 chr10 94791619 94791738 -45525027 + (CGG)n Simple_repeat Simple_repeat 1 114 0 220 151 19 19 chr10 94791760 94791831 -45524934 + (CGG)n Simple_repeat Simple_repeat 1 71 0 29 28 0 0 chr10 94792025 94792061 -45524704 + GC_rich Low_complexity Low_complexity 1 36 0 1789 99 19 15 chr10 94793392 94793654 -45523111 + AluSx SINE Alu 30 292 -20 2486 64 0 0 chr10 94793683 94793994 -45522771 - AluY SINE Alu 0 311 1 186 118 0 0 chr10 94794068 94794102 -45522663 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 720 145 46 61 chr10 94794175 94794306 -45522459 - FLAM_C SINE Alu -4 129 1 1691 138 26 26 chr10 94794397 94794742 -45522023 - AluJb SINE Alu 0 350 6 1948 147 0 7 chr10 94794795 94795094 -45521671 + AluSx SINE Alu 1 297 -15 504 252 152 0 chr10 94795130 94795281 -45521484 - MLT1C LTR MaLR 0 505 332 555 128 21 43 chr10 94795378 94795472 -45521293 - FLAM_A SINE Alu -6 136 45 2392 69 0 0 chr10 94795474 94795779 -45520986 - AluY SINE Alu -6 305 1 553 238 28 13 chr10 94795779 94795931 -45520834 - MLT1C LTR MaLR -280 187 26 1923 103 30 40 chr10 94795932 94796234 -45520531 - AluSp SINE Alu -14 299 1 949 129 0 0 chr10 94796242 94796381 -45520384 - AluJo SINE Alu -173 139 1 2040 139 3 0 chr10 94797468 94797777 -45518988 - AluSx SINE Alu -2 310 1 1469 153 78 4 chr10 94797781 94798062 -45518703 - AluSx SINE Alu -10 302 1 631 208 0 24 chr10 94798073 94798198 -45518567 - FLAM_A SINE Alu -10 123 2 500 249 23 51 chr10 94798201 94798378 -45518387 + MER58C DNA MER1_type 44 215 0 204 370 116 6 chr10 94798496 94798669 -45518096 - MIR SINE MIR -32 230 39 1045 261 29 94 chr10 94798725 94798863 -45517902 - MLT1J LTR MaLR -37 474 329 2089 79 0 7 chr10 94798863 94799142 -45517623 - AluSx SINE Alu -15 297 21 1045 261 29 94 chr10 94799142 94799493 -45517272 - MLT1J LTR MaLR -182 329 17 1793 159 0 7 chr10 94799669 94799970 -45516795 - AluSx SINE Alu -13 299 1 1779 138 3 27 chr10 94800399 94800696 -45516069 - AluJo SINE Alu -10 302 13 221 294 120 11 chr10 94800839 94800931 -45515834 + MIR SINE MIR 111 212 -50 1464 193 10 17 chr10 94800941 94801231 -45515534 + AluJo SINE Alu 5 292 -20 180 161 0 0 chr10 94801295 94801326 -45515439 + MIR SINE MIR 219 249 -13 229 296 72 0 chr10 94801549 94801674 -45515091 - L2 LINE L2 -1321 1993 1860 299 308 0 33 chr10 94801865 94801956 -45514809 - L2 LINE L2 -10 3262 3175 457 281 33 0 chr10 94802144 94802265 -45514500 + MIR SINE MIR 105 229 -33 2177 119 0 3 chr10 94802588 94802898 -45513867 - AluSx SINE Alu -3 309 1 1051 123 0 7 chr10 94803626 94803781 -45512984 - FRAM SINE Alu -30 146 1 2369 76 3 16 chr10 94803791 94804105 -45512660 + AluSq SINE Alu 1 310 -3 1754 130 8 0 chr10 94804114 94804368 -45512397 + AluSq SINE Alu 1 256 -57 205 234 247 0 chr10 94804557 94804634 -45512131 - MIR SINE MIR -115 147 52 2468 49 3 7 chr10 94804763 94805071 -45511694 + AluY SINE Alu 1 307 -4 2250 95 23 0 chr10 94805084 94805390 -45511375 + AluSp SINE Alu 1 313 0 256 137 0 20 chr10 94805428 94805479 -45511286 + AluJo SINE Alu 82 131 -171 538 118 0 13 chr10 94805481 94805752 -45511013 + AluSq SINE Alu 1 313 0 810 186 7 0 chr10 94805754 94805899 -45510866 + AluJo SINE Alu 137 282 -30 180 302 129 17 chr10 94806329 94806445 -45510320 + MIR3 SINE MIR 11 139 -69 1647 167 3 17 chr10 94806727 94807020 -45509745 - AluJb SINE Alu -23 289 1 1377 158 42 8 chr10 94807063 94807303 -45509462 - AluJb SINE Alu -26 286 39 2235 97 0 0 chr10 94807405 94807703 -45509062 + AluSx SINE Alu 1 298 -14 1121 121 0 65 chr10 94807977 94808004 -45508761 - MER4E LTR ERV1 0 779 752 2229 76 0 3 chr10 94808004 94808324 -45508441 - AluSp SINE Alu 0 313 1 1121 121 0 65 chr10 94808324 94808495 -45508270 - MER4E LTR ERV1 -27 752 594 1461 188 37 11 chr10 94808501 94808773 -45507992 + AluJo SINE Alu 5 283 -19 300 191 0 0 chr10 94808773 94808820 -45507945 - Alu SINE Alu -256 47 1 375 245 110 59 chr10 94808871 94808929 -45507836 - L1MC5 LINE L1 -178 7783 7729 2114 117 19 3 chr10 94808929 94809236 -45507529 - AluSx SINE Alu 0 312 1 375 245 110 59 chr10 94809236 94809415 -45507350 - L1MC5 LINE L1 -232 7729 7561 1969 148 0 3 chr10 94809415 94809718 -45507047 - AluSx SINE Alu -10 302 1 2235 79 0 26 chr10 94809726 94810031 -45506734 - AluY SINE Alu -14 297 1 375 245 110 59 chr10 94810031 94810056 -45506709 - L1MC5 LINE L1 -406 7555 7497 2245 98 0 0 chr10 94810100 94810397 -45506368 - AluSx SINE Alu -15 297 1 1542 150 160 3 chr10 94810538 94810838 -45505927 + MER101 LTR ERV1 2 348 -126 951 87 14 0 chr10 94810838 94810976 -45505789 + AluSg/x SINE Alu 171 310 0 838 139 7 0 chr10 94810989 94811126 -45505639 + MER101 LTR ERV1 337 474 0 2281 110 0 0 chr10 94811268 94811577 -45505188 - AluSc SINE Alu 0 309 1 529 103 0 0 chr10 94811629 94811707 -45505058 - MER4C LTR ERV1 -11 454 377 1484 110 0 0 chr10 94811709 94811909 -45504856 + AluSq SINE Alu 1 200 -113 236 88 0 0 chr10 94811911 94811945 -45504820 + AluSq SINE Alu 238 271 -31 263 136 19 0 chr10 94811964 94812058 -45504707 + GA-rich Low_complexity Low_complexity 1 95 0 635 164 9 9 chr10 94812063 94812179 -45504586 - MER4C LTR ERV1 -77 388 273 765 139 0 0 chr10 94812237 94812359 -45504406 - MER4C LTR ERV1 -207 258 137 2078 70 6 64 chr10 94812360 94812674 -45504091 - AluY SINE Alu -14 297 2 361 505 0 0 chr10 94812677 94812838 -45503927 - AluJ/monomer SINE Alu -257 46 2 1451 132 48 8 chr10 94812841 94813092 -45503673 - AluSx SINE Alu -10 302 42 380 214 12 0 chr10 94813129 94813213 -45503552 - L1MC/D LINE L1 -522 5811 5727 790 61 0 0 chr10 94813457 94813556 -45503209 + AluS SINE Alu 2 100 -213 1128 58 0 7 chr10 94813556 94813695 -45503070 - AluY SINE Alu -173 138 1 21 0 0 0 chr10 94813715 94813736 -45503029 + AT_rich Low_complexity Low_complexity 1 21 0 670 132 7 110 chr10 94814158 94814294 -45502471 + FLAM_C SINE Alu 2 123 -20 1580 144 3 125 chr10 94814384 94814750 -45502015 + AluSx SINE Alu 5 302 0 2068 105 11 0 chr10 94814758 94815043 -45501722 + AluSg SINE Alu 5 292 -18 865 215 12 0 chr10 94815047 94815210 -45501555 + FRAM SINE Alu 2 166 0 2211 99 0 0 chr10 94815224 94815518 -45501247 + AluY SINE Alu 1 294 -17 777 185 0 0 chr10 94815568 94815698 -45501067 + AluJo SINE Alu 1 130 -172 1273 167 3 147 chr10 94815700 94816041 -45500724 - AluJo SINE Alu -9 293 2 1998 121 4 0 chr10 94816044 94816355 -45500410 - AluSx SINE Alu 0 312 1 633 190 0 0 chr10 94816371 94816471 -45500294 + AluJo SINE Alu 132 231 -81 482 222 102 28 chr10 94816546 94816715 -45500050 - L1P4 LINE L1 -543 5618 5439 2104 114 3 0 chr10 94816865 94817163 -45499602 - AluSx SINE Alu -13 299 1 1980 112 6 35 chr10 94817182 94817495 -45499270 + AluSx SINE Alu 1 304 -8 2065 125 0 3 chr10 94817497 94817800 -45498965 + AluSx SINE Alu 1 302 -10 2383 48 3 0 chr10 94817802 94818082 -45498683 + AluY SINE Alu 3 286 -25 264 30 0 0 chr10 94818082 94818115 -45498650 + (CA)n Simple_repeat Simple_repeat 2 34 0 837 220 100 5 chr10 94818151 94818351 -45498414 + MER20 DNA MER1_type 1 219 0 827 178 7 0 chr10 94818453 94818588 -45498177 + FLAM_C SINE Alu 2 137 -6 1777 142 40 10 chr10 94818588 94818891 -45497874 + AluSx SINE Alu 1 312 0 2041 129 0 19 chr10 94818914 94819232 -45497533 + AluSx SINE Alu 1 312 0 2370 88 0 0 chr10 94819233 94819538 -45497227 + AluY SINE Alu 1 305 -6 2063 120 3 3 chr10 94819763 94820063 -45496702 - AluSx SINE Alu -12 300 1 2254 109 0 0 chr10 94820289 94820600 -45496165 + AluSx SINE Alu 1 311 -1 2166 89 0 40 chr10 94820609 94820934 -45495831 + AluSx SINE Alu 1 312 0 2228 68 3 26 chr10 94820935 94821243 -45495522 + AluY SINE Alu 1 301 -10 1649 164 40 13 chr10 94821243 94821547 -45495218 + AluJb SINE Alu 1 312 0 1271 145 42 169 chr10 94821575 94821912 -45494853 - AluSx SINE Alu -16 296 3 839 178 7 0 chr10 94821913 94822048 -45494717 - AluJo SINE Alu -175 137 2 1554 129 65 0 chr10 94822106 94822354 -45494411 - AluSx SINE Alu -13 299 36 1988 98 51 0 chr10 94822366 94822641 -45494124 - AluSc SINE Alu -20 289 1 2396 60 0 0 chr10 94822641 94822940 -45493825 - AluY SINE Alu -12 299 1 2098 113 0 0 chr10 94822944 94823237 -45493528 - AluSp SINE Alu -14 299 7 1987 132 3 16 chr10 94823247 94823550 -45493215 - AluSg SINE Alu -11 299 1 1753 163 0 10 chr10 94823622 94823911 -45492854 + AluJb SINE Alu 2 287 -25 1711 160 10 7 chr10 94824200 94824494 -45492271 - AluSx SINE Alu -16 296 2 227 236 0 0 chr10 94824495 94824550 -45492215 - L1MD2 LINE L1 -170 6189 6135 1580 148 0 0 chr10 94824646 94824918 -45491847 + AluSx SINE Alu 45 316 0 283 135 0 157 chr10 94824918 94825007 -45491758 - L1MD2 LINE L1 -437 5922 5848 1360 152 0 0 chr10 94825175 94825385 -45491380 - AluJo SINE Alu -100 212 3 1080 97 0 42 chr10 94825588 94825753 -45491012 + AluSg/x SINE Alu 155 312 0 1934 66 0 0 chr10 94825754 94825996 -45490769 + AluY SINE Alu 1 242 -69 320 125 16 0 chr10 94826035 94826099 -45490666 + C-rich Low_complexity Low_complexity 1 65 0 1729 90 72 48 chr10 94826099 94826288 -45490477 - AluSg SINE Alu -11 299 116 2410 62 0 3 chr10 94826288 94826593 -45490172 - AluY SINE Alu -7 304 1 330 70 70 70 chr10 94826593 94826650 -45490115 - AluSg SINE Alu -186 114 58 1729 90 72 48 chr10 94826650 94826693 -45490072 - AluSg SINE Alu -193 117 3 868 124 159 0 chr10 94826693 94826805 -45489960 - AluSg SINE Alu -175 135 1 782 169 7 34 chr10 94826910 94827058 -45489707 - AluJb SINE Alu -167 145 2 2190 92 3 3 chr10 94827061 94827356 -45489409 - AluSp SINE Alu -18 295 1 211 259 71 98 chr10 94827433 94827528 -45489237 + L2 LINE L2 3203 3296 -17 1882 144 6 10 chr10 94827528 94827841 -45488924 + AluJb SINE Alu 1 312 0 211 259 71 98 chr10 94827841 94827857 -45488908 + L2 LINE L2 3296 3311 -2 1942 109 18 0 chr10 94828011 94828314 -45488451 - AluSc SINE Alu 0 309 2 2131 118 0 19 chr10 94828315 94828628 -45488137 - AluSq SINE Alu -6 307 1 1473 173 16 62 chr10 94828751 94829074 -45487691 + AluJo SINE Alu 1 308 -4 2093 107 0 0 chr10 94829079 94829417 -45487348 + AluSx SINE Alu 3 340 0 2098 99 3 3 chr10 94829578 94829871 -45486894 - AluY SINE Alu -18 293 1 957 75 15 0 chr10 94829871 94830004 -45486761 - AluSp SINE Alu -178 135 1 206 264 0 0 chr10 94830073 94830126 -45486639 + L2 LINE L2 3261 3313 0 211 176 0 0 chr10 94830371 94830405 -45486360 + (CCG)n Simple_repeat Simple_repeat 3 36 0 272 254 11 49 chr10 94830561 94830746 -45486019 + (CGGG)n Simple_repeat Simple_repeat 1 178 0 25 51 0 0 chr10 94830822 94830861 -45485904 + GC_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 94830898 94830931 -45485834 + GC_rich Low_complexity Low_complexity 1 33 0 29 28 0 0 chr10 94831068 94831104 -45485661 + GC_rich Low_complexity Low_complexity 1 36 0 27 62 0 0 chr10 94831255 94831303 -45485462 + GC_rich Low_complexity Low_complexity 1 48 0 180 0 0 0 chr10 94831858 94831878 -45484887 + (T)n Simple_repeat Simple_repeat 1 20 0 290 244 0 84 chr10 94831956 94832075 -45484690 + MIR SINE MIR 32 140 -122 2060 104 3 0 chr10 94832437 94832726 -45484039 - AluSx SINE Alu -20 292 3 279 293 121 0 chr10 94832826 94832925 -45483840 + L2 LINE L2 3160 3270 -2 1939 161 7 0 chr10 94832976 94833286 -45483479 + AluJb SINE Alu 1 312 0 423 350 68 34 chr10 94833419 94833653 -45483112 + MIR SINE MIR 3 244 -18 257 0 0 0 chr10 94833653 94833690 -45483075 - AluY SINE Alu -4 298 262 669 174 132 14 chr10 94833692 94833836 -45482929 + AluJb SINE Alu 138 298 -14 2165 117 0 22 chr10 94834187 94834503 -45482262 - AluSq SINE Alu -4 309 1 1967 122 10 13 chr10 94834503 94834806 -45481959 - AluSx SINE Alu -10 302 1 223 125 0 0 chr10 94834979 94835011 -45481754 - MER91B DNA MER1_type -123 67 36 422 215 37 9 chr10 94835048 94835155 -45481610 - L2 LINE L2 -12 3260 3151 424 299 39 16 chr10 94835156 94835283 -45481482 + MIR SINE MIR 126 255 -7 1480 185 22 0 chr10 94835422 94835692 -45481073 - MER7A DNA MER2_type -8 338 65 286 153 102 0 chr10 94835730 94835789 -45480976 - MER7A DNA MER2_type -275 73 9 2321 99 0 3 chr10 94835856 94836169 -45480596 - AluSq SINE Alu -1 312 1 1667 161 18 7 chr10 94836194 94836479 -45480286 + AluJb SINE Alu 1 288 -24 2082 99 7 10 chr10 94836490 94836792 -45479973 + AluSx SINE Alu 1 301 -11 2247 67 0 20 chr10 94837169 94837495 -45479270 - AluY SINE Alu 0 311 1 2015 105 6 51 chr10 94837571 94837748 -45479017 - AluSp SINE Alu -12 301 143 1993 80 87 7 chr10 94837748 94838036 -45478729 - AluY SINE Alu 0 311 1 2015 105 6 51 chr10 94838036 94838173 -45478592 - AluSp SINE Alu -170 143 1 742 177 0 28 chr10 94838386 94838527 -45478238 - FLAM_A SINE Alu 0 142 6 700 177 15 31 chr10 94839166 94839296 -45477469 - FLAM_C SINE Alu -4 129 2 2341 88 3 0 chr10 94839307 94839615 -45477150 - AluSp SINE Alu -4 309 1 252 309 74 49 chr10 94839665 94839827 -45476938 + L2 LINE L2 2639 2804 -510 375 155 83 0 chr10 94839980 94840064 -45476701 + MER21B LTR ERV1 98 188 -675 * 1169 231 195 22 chr10 94840049 94840312 -45476453 + MER21B LTR ERV1 355 571 -292 1285 184 79 14 chr10 94840312 94840589 -45476176 - AluJo SINE Alu -17 295 1 1169 231 195 22 chr10 94840589 94840741 -45476024 + MER21B LTR ERV1 571 842 -21 2287 84 10 0 chr10 94840802 94841100 -45475665 + AluSp SINE Alu 1 301 -12 503 254 167 8 chr10 94841121 94841361 -45475404 + L2 LINE L2 2867 3144 -169 1583 156 98 0 chr10 94841374 94841649 -45475116 - AluJb SINE Alu -6 306 5 2126 82 0 60 chr10 94841660 94841841 -45474924 - AluSq SINE Alu -13 300 145 2124 106 3 13 chr10 94841841 94842144 -45474621 - AluSx SINE Alu -12 300 1 2126 82 0 60 chr10 94842144 94842281 -45474484 - AluSq SINE Alu -168 145 1 21 0 0 0 chr10 94842289 94842310 -45474455 + AT_rich Low_complexity Low_complexity 1 21 0 2078 124 0 3 chr10 94842714 94843013 -45473752 + AluSg SINE Alu 1 298 -12 1243 85 12 0 chr10 94843288 94843453 -45473312 - AluY SINE Alu -12 299 133 2584 33 0 3 chr10 94843453 94843755 -45473010 - AluY SINE Alu -10 301 1 216 0 0 0 chr10 94844552 94844576 -45472189 + (TA)n Simple_repeat Simple_repeat 2 25 0 1877 139 30 0 chr10 94844580 94844883 -45471882 - AluSx SINE Alu 0 312 1 1765 143 21 0 chr10 94844897 94845183 -45471582 - AluSx SINE Alu -2 310 19 2078 97 24 0 chr10 94845204 94845494 -45471271 - AluSc SINE Alu -12 297 1 2012 128 10 3 chr10 94846359 94846655 -45470110 + AluJo SINE Alu 1 298 -14 1952 137 3 6 chr10 94846658 94846971 -45469794 + AluSx SINE Alu 1 312 0 2105 129 0 0 chr10 94847198 94847509 -45469256 - AluSx SINE Alu -1 311 1 188 326 53 45 chr10 94847511 94847643 -45469122 + MIR SINE MIR 116 248 -14 324 310 0 10 chr10 94848110 94848210 -45468555 + L1ME3 LINE L1 5065 5163 -983 1464 146 4 8 chr10 94848210 94848450 -45468315 - AluSp SINE Alu -5 308 70 1758 102 28 67 chr10 94848556 94848869 -45467896 + AluSg SINE Alu 9 310 0 871 298 90 32 chr10 94848873 94849301 -45467464 + L1ME3 LINE L1 5367 5839 -323 1280 165 184 12 chr10 94849301 94849556 -45467209 - AluJo SINE Alu -2 300 2 871 298 90 32 chr10 94849556 94849761 -45467004 + L1ME3 LINE L1 5839 6031 -131 1136 93 0 0 chr10 94850387 94850537 -45466228 + AluSg/x SINE Alu 144 293 -17 1799 168 0 0 chr10 94850640 94850925 -45465840 - AluJb SINE Alu -10 302 18 1699 138 0 43 chr10 94851584 94851889 -45464876 + AluJo SINE Alu 1 292 -20 1001 88 0 7 chr10 94851947 94852083 -45464682 + AluSq/x SINE Alu 1 135 -178 2112 120 7 3 chr10 94852083 94852392 -45464373 + AluSq SINE Alu 1 310 -3 2356 57 0 17 chr10 94852393 94852694 -45464071 - AluY SINE Alu -15 296 1 362 207 117 0 chr10 94853172 94853283 -45463482 + MER113 DNA MER1_type? 69 192 -329 2060 129 3 0 chr10 94853321 94853624 -45463141 - AluSx SINE Alu -8 304 1 289 278 79 16 chr10 94853625 94853751 -45463014 + MER113 DNA MER1_type? 265 398 -123 211 269 19 0 chr10 94855562 94855614 -45461151 + MER5A DNA MER1_type 30 82 -107 203 273 0 0 chr10 94856411 94856455 -45460310 + (CCCCAG)n Simple_repeat Simple_repeat 2 45 0 232 296 247 22 chr10 94857943 94858006 -45458759 + L2 LINE L2 2624 2672 -642 1966 103 59 10 chr10 94858006 94858296 -45458469 - AluSp SINE Alu -8 305 2 232 296 247 22 chr10 94858296 94858499 -45458266 + L2 LINE L2 2672 2950 -364 260 268 62 82 chr10 94858557 94858751 -45458014 + L2 LINE L2 3122 3311 -2 180 380 53 11 chr10 94858774 94858961 -45457804 - MIR SINE MIR -55 207 13 1959 138 20 0 chr10 94859584 94859881 -45456884 - AluSx SINE Alu -2 310 8 762 175 0 0 chr10 94859926 94860046 -45456719 - AluJb SINE Alu -58 254 135 991 168 6 0 chr10 94860048 94860215 -45456550 - AluSg/x SINE Alu -16 294 127 1870 98 4 0 chr10 94860216 94860462 -45456303 - AluSx SINE Alu -59 253 7 1225 168 111 43 chr10 94860470 94860750 -45456015 - AluJo SINE Alu -13 299 1 785 276 77 6 chr10 94861419 94861846 -45454919 - L2 LINE L2 -160 3153 2689 1994 132 0 16 chr10 94862004 94862307 -45454458 - AluSx SINE Alu -14 298 1 1187 126 0 16 chr10 94862311 94862477 -45454288 - AluSp SINE Alu -9 304 140 2046 118 7 13 chr10 94862477 94862781 -45453984 - AluSq SINE Alu -11 302 1 1187 126 0 16 chr10 94862781 94862797 -45453968 - AluSp SINE Alu -173 140 125 2110 131 0 0 chr10 94862870 94863176 -45453589 - AluSx SINE Alu -6 306 1 438 315 43 37 chr10 94863185 94863509 -45453256 - L1ME4a LINE L1 -274 5847 5522 2311 61 10 0 chr10 94863539 94863832 -45452933 - AluY SINE Alu -15 296 1 1765 143 0 11 chr10 94863918 94864197 -45452568 - AluSx SINE Alu 0 312 37 2166 63 40 23 chr10 94864209 94864508 -45452257 - AluY SINE Alu -7 304 1 892 50 0 41 chr10 94864508 94864629 -45452136 - AluY SINE Alu -175 136 21 186 260 110 102 chr10 94865019 94865146 -45451619 + MIR SINE MIR 20 147 -115 344 259 47 35 chr10 94865596 94865766 -45450999 - L2 LINE L2 -464 2850 2679 186 133 0 0 chr10 94866241 94866271 -45450494 + (GAA)n Simple_repeat Simple_repeat 2 31 0 831 273 169 10 chr10 94866661 94866762 -45450003 - L1MC4 LINE L1 -1 8041 7957 1575 153 54 37 chr10 94866762 94866914 -45449851 - AluJb SINE Alu -3 299 151 2001 117 3 39 chr10 94866914 94867084 -45449681 - AluSq SINE Alu -16 297 122 207 0 0 0 chr10 94867084 94867107 -45449658 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2028 92 26 0 chr10 94867108 94867381 -45449384 - AluY SINE Alu -31 280 1 2001 117 3 39 chr10 94867381 94867516 -45449249 - AluSq SINE Alu -190 123 1 1575 153 54 37 chr10 94867516 94867657 -45449108 - AluJb SINE Alu -151 151 1 831 273 169 10 chr10 94867657 94867940 -45448825 - L1MC4 LINE L1 -85 7957 7596 858 87 40 0 chr10 94867950 94868076 -45448689 - FLAM_C SINE Alu -12 131 1 2538 265 119 34 chr10 94868077 94868782 -45447983 - L1MC4 LINE L1 -491 7551 6907 1850 159 0 16 chr10 94868782 94869096 -45447669 - AluJb SINE Alu -3 309 1 2538 265 119 34 chr10 94869096 94869265 -45447500 - L1MC4 LINE L1 -1135 6907 6754 1693 199 0 3 chr10 94869265 94869562 -45447203 + AluJo SINE Alu 1 296 -16 2538 265 119 34 chr10 94869562 94869790 -45446975 - L1MC4 LINE L1 -1288 6754 6354 2140 116 0 7 chr10 94869834 94870136 -45446629 + AluSx SINE Alu 1 300 -12 1475 156 40 0 chr10 94870145 94870395 -45446370 + AluJb SINE Alu 1 260 -52 2011 86 68 0 chr10 94870489 94870767 -45445998 + AluSg SINE Alu 1 297 -13 193 271 0 0 chr10 94870893 94870941 -45445824 + MER5B DNA MER1_type 1 48 -130 624 144 21 0 chr10 94870959 94871056 -45445709 - AluJb SINE Alu -24 288 190 1198 240 72 0 chr10 94871078 94871357 -45445408 + AluJo SINE Alu 2 300 -2 341 307 0 50 chr10 94871364 94871504 -45445261 + MER5B DNA MER1_type 46 178 0 367 286 103 43 chr10 94871842 94872076 -45444689 + L1MC4a LINE L1 5812 6059 -1749 2020 96 0 0 chr10 94872126 94872397 -45444368 + AluY SINE Alu 39 309 -2 1328 147 70 80 chr10 94872405 94872719 -45444046 + AluSx SINE Alu 1 311 -1 439 236 0 41 chr10 94873439 94873562 -45443203 - MER3 DNA MER1_type 0 209 92 2146 123 0 0 chr10 94873602 94873902 -45442863 - AluSx SINE Alu -12 300 1 1585 118 4 0 chr10 94873907 94874145 -45442620 - AluSg SINE Alu -12 298 60 2070 99 7 10 chr10 94874145 94874436 -45442329 - AluSx SINE Alu -16 296 6 484 231 179 5 chr10 94874436 94874710 -45442055 - L1M4 LINE L1 -3785 3172 2833 2201 71 26 32 chr10 94874717 94875026 -45441739 - AluSx SINE Alu -5 307 1 331 331 138 17 chr10 94875026 94875207 -45441558 - L1M4 LINE L1 -5450 1409 1207 294 332 106 22 chr10 94875630 94875856 -45440909 - L1M4 LINE L1 -6613 246 2 1084 97 7 7 chr10 94876359 94876514 -45440251 + AluSq SINE Alu 1 155 -158 1732 174 3 7 chr10 94876694 94876998 -45439767 + AluJo SINE Alu 1 303 -9 2381 80 0 0 chr10 94877040 94877340 -45439425 + AluSg SINE Alu 1 300 -10 682 182 0 54 chr10 94877440 94877465 -45439300 - FLAM_C SINE Alu -172 140 115 2129 118 7 0 chr10 94877465 94877769 -45438996 + AluSp SINE Alu 1 306 -7 682 182 0 54 chr10 94877769 94877891 -45438874 - FLAM_C SINE Alu -197 115 1 2284 94 0 3 chr10 94878103 94878410 -45438355 - AluSx SINE Alu -6 306 1 282 243 72 18 chr10 94878419 94878530 -45438235 - L1ME3 LINE L1 -2 6160 6044 1567 126 92 44 chr10 94879293 94879449 -45437316 - AluJb SINE Alu -4 308 161 2279 92 3 10 chr10 94879449 94879763 -45437002 - AluSp SINE Alu -1 312 1 1567 126 92 44 chr10 94879763 94879900 -45436865 - AluJb SINE Alu -151 161 1 648 157 0 41 chr10 94879916 94879950 -45436815 - FLAM_A SINE Alu -170 141 107 1908 128 7 20 chr10 94879950 94880246 -45436519 + AluSg SINE Alu 1 292 -18 648 157 0 41 chr10 94880246 94880332 -45436433 - FLAM_A SINE Alu -204 107 26 306 203 29 67 chr10 94880365 94880470 -45436295 - AluSc SINE Alu -108 191 112 213 211 88 0 chr10 94880493 94880550 -45436215 - MIR SINE MIR -189 73 12 736 220 0 0 chr10 94881010 94881142 -45435623 - AluJo SINE Alu -176 136 5 185 326 129 8 chr10 94881776 94881908 -45434857 + MIR SINE MIR 77 224 -38 2202 86 0 45 chr10 94882719 94883032 -45433733 - AluSx SINE Alu -13 299 1 1085 143 143 22 chr10 94883417 94883641 -45433124 + AluJo SINE Alu 49 299 -13 2422 84 0 0 chr10 94883658 94883966 -45432799 - AluSq SINE Alu 0 313 6 235 217 0 0 chr10 94883977 94884023 -45432742 + FRAM SINE Alu 1 38 -129 316 256 39 13 chr10 94884027 94884105 -45432660 - L1MCa LINE L1 -4351 2075 1996 316 320 40 0 chr10 94884082 94884182 -45432583 + L1MC3 LINE L1 6543 6646 -1139 * 349 209 44 7 chr10 94884125 94884215 -45432550 - L1MC4 LINE L1 -1339 6983 1977 708 119 0 56 chr10 94884244 94884370 -45432395 + FRAM SINE Alu 21 139 -37 198 350 175 8 chr10 94884646 94884766 -45431999 - MIR SINE MIR -75 187 48 301 247 52 52 chr10 94885515 94885612 -45431153 - L1M4 LINE L1 -364 5814 5718 2128 113 0 7 chr10 94886128 94886438 -45430327 - AluSq SINE Alu -5 308 1 1817 125 69 0 chr10 94886447 94886736 -45430029 - AluSq SINE Alu 0 313 5 2105 107 0 0 chr10 94886746 94887037 -45429728 - AluY SINE Alu -16 295 5 182 193 74 0 chr10 94887037 94887086 -45429679 - MIR SINE MIR -63 145 103 1897 144 0 46 chr10 94888121 94888448 -45428317 - AluJb SINE Alu 0 312 1 2063 133 7 0 chr10 94888508 94888808 -45427957 - AluSx SINE Alu -10 302 1 210 330 157 0 chr10 94890134 94890249 -45426516 + L2 LINE L2 3054 3186 -86 468 286 17 39 chr10 94890340 94890518 -45426247 + MER58B DNA MER1_type 168 341 0 328 216 99 25 chr10 94890564 94890724 -45426041 + MIR SINE MIR 51 227 -35 1993 128 0 39 chr10 94891109 94891227 -45425538 + AluSx SINE Alu 1 122 -190 2365 58 7 10 chr10 94891227 94891535 -45425230 + AluY SINE Alu 1 307 -4 1993 128 0 39 chr10 94891535 94891722 -45425043 + AluSx SINE Alu 122 294 -18 180 0 0 0 chr10 94892437 94892457 -45424308 + (T)n Simple_repeat Simple_repeat 1 20 0 2229 101 20 0 chr10 94893112 94893418 -45423347 - AluSx SINE Alu 0 312 1 1201 133 5 24 chr10 94893446 94893656 -45423109 + AluJb SINE Alu 17 222 -90 1519 217 105 8 chr10 94893674 94894066 -45422699 - L1MB5 LINE L1 -69 6105 5676 2413 69 3 0 chr10 94894078 94894384 -45422381 - AluY SINE Alu -2 309 3 2116 130 0 3 chr10 94894386 94894686 -45422079 - AluSx SINE Alu -13 299 1 1234 147 0 80 chr10 94894696 94894947 -45421818 - AluJo SINE Alu 0 312 82 1781 155 3 27 chr10 94895090 94895386 -45421379 + AluSx SINE Alu 1 289 -23 1875 164 0 7 chr10 94895392 94895697 -45421068 + AluSx SINE Alu 1 303 -9 2089 112 41 0 chr10 94895714 94895891 -45420874 - AluY SINE Alu -2 309 114 207 69 0 0 chr10 94895891 94895920 -45420845 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2089 112 41 0 chr10 94895920 94896037 -45420728 - AluY SINE Alu -197 114 3 1690 159 24 10 chr10 94896039 94896334 -45420431 - AluJb SINE Alu -13 299 1 1497 202 13 18 chr10 94896396 94896777 -45419988 - L1MB5 LINE L1 -1100 5046 4668 295 286 93 12 chr10 94896825 94896986 -45419779 - L1MC5 LINE L1 -179 7782 7609 994 170 12 6 chr10 94896990 94897155 -45419610 - AluJ SINE Alu 0 302 137 1167 194 127 12 chr10 94897168 94897421 -45419344 - AluSg SINE Alu -15 295 14 662 302 32 40 chr10 94897428 94897802 -45418963 - L1MC4 LINE L1 -333 7709 7339 325 301 52 4 chr10 94897881 94898018 -45418747 - MIR SINE MIR -62 146 12 221 319 17 34 chr10 94898667 94898786 -45417979 + L2 LINE L2 2952 3068 -204 960 119 56 0 chr10 94899228 94899371 -45417394 - AluJ SINE Alu -161 151 1 1997 125 3 19 chr10 94899373 94899684 -45417081 - AluSx SINE Alu -6 306 1 709 171 34 27 chr10 94899739 94899885 -45416880 - L1MB3 LINE L1 -2 6181 6035 2075 104 0 32 chr10 94899887 94900195 -45416570 - AluSx SINE Alu -14 298 1 2176 99 0 0 chr10 94900292 94900637 -45416128 - AluSx SINE Alu 0 345 1 778 143 24 16 chr10 94900640 94900766 -45415999 - AluJo/FLAM SINE Alu -185 127 1 758 145 0 83 chr10 94900871 94901016 -45415749 - FLAM_C SINE Alu 0 133 1 518 283 22 0 chr10 94901665 94901803 -45414962 + MIR SINE MIR 44 184 -78 1121 222 8 12 chr10 94901867 94902110 -45414655 - MIR SINE MIR -19 243 2 900 131 0 26 chr10 94902742 94902884 -45413881 + FRAM SINE Alu 28 167 -145 2307 76 0 16 chr10 94902884 94903200 -45413565 + AluY SINE Alu 1 311 0 802 232 0 24 chr10 94903372 94903540 -45413225 + AluJb SINE Alu 136 299 -13 2182 109 0 13 chr10 94903625 94903929 -45412836 + AluSx SINE Alu 1 300 -12 2309 97 0 6 chr10 94903983 94904294 -45412471 - AluSc SINE Alu 0 309 1 2018 151 0 19 chr10 94904303 94904621 -45412144 - AluSx SINE Alu 0 312 1 1560 138 32 87 chr10 94906541 94906707 -45410058 - AluSx SINE Alu -17 295 152 1862 105 76 7 chr10 94906707 94906984 -45409781 + AluSx SINE Alu 1 296 -16 1560 138 32 87 chr10 94906984 94907129 -45409636 - AluSx SINE Alu -160 152 1 2169 116 0 0 chr10 94907992 94908286 -45408479 - AluSq SINE Alu -19 294 1 202 312 244 29 chr10 94910202 94910407 -45406358 + MIR SINE MIR 14 262 0 329 260 0 42 chr10 94910411 94910507 -45406258 + FLAM_A SINE Alu 42 133 0 2303 62 31 0 chr10 94910635 94910924 -45405841 + AluY SINE Alu 1 298 -13 289 296 17 55 chr10 94910955 94911136 -45405629 - L1MEd LINE L1 -4921 1705 1450 2075 109 23 3 chr10 94911138 94911442 -45405323 - AluSx SINE Alu -2 310 1 351 278 0 0 chr10 94911520 94911610 -45405155 + MER94 DNA DNA 1 90 -44 1052 199 0 10 chr10 94911880 94912081 -45404684 + AluJo SINE Alu 22 220 -92 33 25 0 0 chr10 94912107 94912147 -45404618 + AT_rich Low_complexity Low_complexity 1 40 0 480 377 72 15 chr10 94912753 94913018 -45403747 - L1MC4a LINE L1 -1817 5991 5712 2214 98 0 0 chr10 94913094 94913390 -45403375 + AluSx SINE Alu 1 296 -16 2280 104 3 0 chr10 94913414 94913722 -45403043 - AluSc SINE Alu 0 309 1 1864 120 10 27 chr10 94913925 94914090 -45402675 - AluSx SINE Alu -14 298 139 2364 80 0 0 chr10 94914090 94914391 -45402374 - AluSx SINE Alu -11 301 1 1864 120 10 27 chr10 94914391 94914524 -45402241 - AluSx SINE Alu -173 139 5 245 268 0 0 chr10 94915045 94915101 -45401664 + MIR SINE MIR 92 147 -115 182 337 34 11 chr10 94915218 94915307 -45401458 - MIR SINE MIR -73 135 45 2308 107 7 0 chr10 94915618 94915927 -45400838 - AluSx SINE Alu -1 311 1 658 202 0 0 chr10 94915987 94916096 -45400669 + FLAM_A SINE Alu 15 123 -19 1796 188 0 3 chr10 94916110 94916430 -45400335 + 7SLRNA srpRNA srpRNA 1 319 -1 2046 110 17 3 chr10 94916492 94916783 -45399982 + AluSx SINE Alu 1 295 -17 1394 198 38 26 chr10 94917562 94917906 -45398859 - MLT1B LTR MaLR 0 390 43 311 299 37 0 chr10 94918393 94918500 -45398265 - MLT1K LTR MaLR -317 271 161 1886 111 40 7 chr10 94919210 94919507 -45397258 - AluSx SINE Alu -4 308 2 1820 155 10 17 chr10 94919721 94920018 -45396747 - AluJb SINE Alu -16 296 2 683 237 0 0 chr10 94920494 94920625 -45396140 - FLAM_A SINE Alu -2 131 1 283 276 187 36 chr10 94920635 94920860 -45395905 - L1MC4a LINE L1 -1913 5895 5637 193 197 28 113 chr10 94921174 94921245 -45395520 + L2 LINE L2 2407 2471 -843 285 29 0 0 chr10 94921620 94921654 -45395111 + (TG)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr10 94923302 94923325 -45393440 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 94923692 94923715 -45393050 + AT_rich Low_complexity Low_complexity 1 23 0 207 139 0 0 chr10 94924216 94924252 -45392513 + (A)n Simple_repeat Simple_repeat 1 36 0 337 313 226 22 chr10 94925853 94926358 -45390407 + L2 LINE L2 1975 2582 -732 2131 114 3 0 chr10 94926456 94926746 -45390019 + AluSx SINE Alu 10 300 -12 2329 94 0 7 chr10 94927398 94927707 -45389058 - AluSx SINE Alu -5 307 1 2466 71 0 0 chr10 94927712 94928022 -45388743 - AluY SINE Alu -1 310 1 1995 125 14 0 chr10 94928033 94928322 -45388443 - AluSx SINE Alu -19 293 1 25 31 0 0 chr10 94928322 94928354 -45388411 + AT_rich Low_complexity Low_complexity 1 32 0 2214 92 0 16 chr10 94928354 94928670 -45388095 - AluSq SINE Alu -1 312 2 871 123 39 0 chr10 94928670 94928800 -45387965 - AluSq/x SINE Alu -178 135 1 365 275 45 56 chr10 94928800 94928978 -45387787 + L2 LINE L2 2923 3098 -174 201 39 0 0 chr10 94929182 94929208 -45387557 + (CTG)n Simple_repeat Simple_repeat 3 28 0 203 286 10 41 chr10 94929652 94929750 -45387015 + (TTGGGG)n Simple_repeat Simple_repeat 2 96 0 22 0 0 0 chr10 94930576 94930598 -45386167 + GC_rich Low_complexity Low_complexity 1 22 0 601 230 40 0 chr10 94931577 94931703 -45385062 + FLAM_C SINE Alu 1 131 -2 2079 131 6 6 chr10 94931758 94932070 -45384695 - AluSx SINE Alu 0 312 1 515 204 31 0 chr10 94932100 94932198 -45384567 + AluJ SINE Alu 29 129 -183 624 223 0 0 chr10 94932200 94932312 -45384453 + AluJ SINE Alu 38 149 -163 939 187 12 6 chr10 94932336 94932507 -45384258 + AluJ SINE Alu 125 296 -16 2110 101 0 10 chr10 94932513 94932644 -45384121 + AluY SINE Alu 5 136 -175 2535 50 0 0 chr10 94932644 94932947 -45383818 + AluY SINE Alu 1 303 -8 2110 101 0 10 chr10 94932947 94933113 -45383652 + AluY SINE Alu 136 299 -12 2163 88 29 13 chr10 94933119 94933425 -45383340 - AluSq SINE Alu -2 311 1 2154 107 0 0 chr10 94933704 94934006 -45382759 - AluSx SINE Alu 0 302 1 1340 116 0 0 chr10 94934010 94934199 -45382566 - AluSg/x SINE Alu -5 307 119 592 90 0 0 chr10 94934299 94934377 -45382388 - AluJ/FLAM SINE Alu -234 78 1 2057 133 17 0 chr10 94934381 94934681 -45382084 - AluSg SINE Alu -5 305 1 1667 147 17 57 chr10 94934715 94935015 -45381750 + AluJb SINE Alu 1 288 -24 2147 104 34 0 chr10 94935022 94935320 -45381445 + AluSg SINE Alu 1 308 -2 843 268 120 25 chr10 94935820 94935852 -45380913 - L1MD3 LINE L1 0 7995 7967 2148 99 10 7 chr10 94935852 94936156 -45380609 - AluSg SINE Alu -4 306 2 843 268 120 25 chr10 94936156 94936489 -45380276 - L1MD3 LINE L1 -28 7967 7595 402 265 49 12 chr10 94936545 94936707 -45380058 - L1MC4 LINE L1 -659 7383 7216 1602 170 71 64 chr10 94936708 94936769 -45379996 - MSTB1 LTR MaLR -5 427 368 2192 100 0 13 chr10 94936769 94937069 -45379696 + AluSq SINE Alu 1 296 -17 1602 170 71 64 chr10 94937069 94937431 -45379334 - MSTB1 LTR MaLR -64 368 1 441 222 81 37 chr10 94937441 94938220 -45378545 - L1MC4 LINE L1 -680 7128 6508 432 258 50 44 chr10 94938246 94938428 -45378337 - L1MC3 LINE L1 -1368 6417 6235 288 310 44 0 chr10 94938814 94938927 -45377838 - MLT1L LTR MaLR -129 486 369 1709 150 0 21 chr10 94941445 94941732 -45375033 - AluJo SINE Alu -2 310 30 937 106 7 26 chr10 94941871 94942022 -45374743 - AluSg/x SINE Alu 0 312 165 224 306 14 90 chr10 94943338 94943482 -45373283 - L2 LINE L2 -505 2809 2677 21 57 0 0 chr10 94944013 94944048 -45372717 + AT_rich Low_complexity Low_complexity 1 35 0 2365 79 7 3 chr10 94947540 94947843 -45368922 - AluSq SINE Alu -9 304 1 351 267 35 17 chr10 94947891 94948007 -45368758 + MIR SINE MIR 20 137 -125 185 281 16 31 chr10 94948323 94948387 -45368378 + MIR3 SINE MIR 97 159 -49 380 319 42 16 chr10 94949261 94949452 -45367313 - MLT1K LTR MaLR -16 572 377 2349 78 0 7 chr10 94950714 94951020 -45365745 - AluSq SINE Alu -9 304 1 2299 101 0 3 chr10 94953428 94953734 -45363031 + AluSx SINE Alu 1 305 -7 1255 185 122 11 chr10 94957333 94957603 -45359162 - AluJo SINE Alu -12 300 1 2833 236 50 29 chr10 94957678 94958943 -45357822 - L1MB8 LINE L1 -12 6166 4881 522 227 143 10 chr10 94959090 94959344 -45357421 - MLT1C LTR MaLR -10 495 187 200 381 132 10 chr10 94959569 94959766 -45356999 + L2 LINE L2 3055 3275 -38 477 303 174 45 chr10 94959868 94959983 -45356782 + L1ME4a LINE L1 5598 5697 -424 722 220 0 8 chr10 94959983 94960115 -45356650 + AluJo/FLAM SINE Alu 1 131 -171 2005 138 0 3 chr10 94960116 94960413 -45356352 + AluSx SINE Alu 2 297 -15 477 303 174 45 chr10 94960413 94960559 -45356206 + L1ME4a LINE L1 5696 5895 -226 587 231 0 0 chr10 94960604 94960721 -45356044 + L1MB3 LINE L1 6052 6168 -15 1404 174 0 59 chr10 94960740 94960845 -45355920 + AluSq SINE Alu 30 140 -173 2221 103 0 10 chr10 94960845 94961155 -45355610 + AluSc SINE Alu 1 307 -2 1404 174 0 59 chr10 94961155 94961336 -45355429 + AluSq SINE Alu 140 299 -14 2386 86 0 13 chr10 94961356 94961669 -45355096 + AluSc SINE Alu 1 309 0 1839 170 0 6 chr10 94961679 94961990 -45354775 + AluJo SINE Alu 1 309 -3 1532 167 53 14 chr10 94963749 94964031 -45352734 + AluSx SINE Alu 1 293 -19 2145 114 7 0 chr10 94964053 94964352 -45352413 + AluSx SINE Alu 1 301 -11 801 210 0 13 chr10 94964559 94964716 -45352049 + FRAM SINE Alu 8 162 -14 1739 154 26 20 chr10 94964740 94965046 -45351719 + AluSx SINE Alu 1 308 -4 993 288 97 41 chr10 94965197 94966083 -45350682 + L1ME3 LINE L1 4926 5942 -222 2441 48 0 0 chr10 94966083 94966376 -45350389 + AluY SINE Alu 1 293 -18 993 288 97 41 chr10 94966376 94966613 -45350152 + L1ME3 LINE L1 5942 6164 0 897 104 15 22 chr10 94966846 94966980 -45349785 + FLAM_C SINE Alu 1 133 0 2469 54 0 0 chr10 94966988 94967283 -45349482 + AluY SINE Alu 3 297 -14 1536 180 29 10 chr10 94967717 94968023 -45348742 + AluJo SINE Alu 1 312 0 1076 225 109 90 chr10 94968159 94968455 -45348310 - MER77 LTR ERV1 -10 595 283 2196 102 0 3 chr10 94968455 94968750 -45348015 - AluSx SINE Alu -14 298 5 1076 225 109 90 chr10 94968750 94968977 -45347788 - MER77 LTR ERV1 -322 283 62 22 0 0 0 chr10 94968999 94969021 -45347744 + AT_rich Low_complexity Low_complexity 1 22 0 1194 120 5 26 chr10 94969272 94969463 -45347302 - AluSg/x SINE Alu -8 304 118 698 100 0 45 chr10 94970523 94970633 -45346132 - AluSg/x SINE Alu -6 306 202 1922 118 21 3 chr10 94970864 94971152 -45345613 + AluSx SINE Alu 1 293 -19 182 222 0 0 chr10 94971437 94971473 -45345292 + MIR SINE MIR 110 145 -117 2328 96 0 0 chr10 94972531 94972833 -45343932 - AluSc SINE Alu -7 302 1 2182 101 3 0 chr10 94972860 94973158 -45343607 + AluSg SINE Alu 1 299 -11 710 197 150 0 chr10 94973309 94973456 -45343309 + AluJo SINE Alu 119 287 -25 661 38 0 0 chr10 94974163 94974242 -45342523 + AluS SINE Alu 1 79 -234 1569 134 118 8 chr10 94974259 94974521 -45342244 + AluSg1 SINE Alu 14 304 -5 596 245 27 7 chr10 94974521 94974668 -45342097 + MER58B DNA MER1_type 155 304 -37 1846 168 0 3 chr10 94974672 94974981 -45341784 + AluJo SINE Alu 1 308 -4 340 340 93 12 chr10 94975177 94975339 -45341426 + L1ME LINE L1 5584 5758 -412 1739 78 21 4 chr10 94975557 94975799 -45340966 + AluSg SINE Alu 1 246 -64 2210 114 0 0 chr10 94976224 94976532 -45340233 - AluSg SINE Alu -2 308 1 808 120 0 0 chr10 94976820 94976928 -45339837 - FLAM_C SINE Alu -25 118 11 2227 113 0 0 chr10 94978493 94978795 -45337970 + AluSc SINE Alu 1 302 -7 2191 90 3 13 chr10 94978865 94979164 -45337601 + AluSp SINE Alu 1 296 -17 948 118 0 0 chr10 94980045 94980180 -45336585 + FLAM_C SINE Alu 9 143 0 225 94 0 0 chr10 94980711 94980743 -45336022 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 251 262 0 0 chr10 94980854 94980915 -45335850 + GA-rich Low_complexity Low_complexity 2 62 0 305 319 31 8 chr10 94981298 94981448 -45335317 - MIR3 SINE MIR -54 154 22 325 242 30 61 chr10 94981713 94981812 -45334953 + MIR SINE MIR 57 152 -56 1057 147 0 0 chr10 94982086 94982249 -45334516 + AluJb SINE Alu 137 299 -13 342 0 0 0 chr10 94982249 94982287 -45334478 + (TA)n Simple_repeat Simple_repeat 2 39 0 1975 41 0 4 chr10 94982477 94982720 -45334045 - AluY SINE Alu -69 242 1 220 213 33 16 chr10 94983438 94983499 -45333266 - MIR SINE MIR -63 145 84 2039 97 18 0 chr10 94983753 94984063 -45332702 - AluSx SINE Alu 0 315 1 972 107 0 0 chr10 94984064 94984195 -45332570 - AluSq/x SINE Alu -175 137 7 1448 169 0 38 chr10 94984220 94984481 -45332284 - AluJo SINE Alu -56 256 6 336 272 10 0 chr10 94984494 94984597 -45332168 - L1M4 LINE L1 -5241 1614 1511 1453 169 0 40 chr10 94984598 94984871 -45331894 - AluJb SINE Alu -6 306 45 743 212 88 12 chr10 94984877 94985047 -45331718 - AluJo SINE Alu -14 298 116 520 206 48 48 chr10 94985047 94985193 -45331572 - L1M4 LINE L1 -5357 1502 1357 2223 88 0 22 chr10 94985199 94985518 -45331247 - AluSx SINE Alu 0 312 1 1653 154 19 41 chr10 94985539 94985858 -45330907 - AluJb SINE Alu 0 312 1 246 295 0 0 chr10 94986097 94986158 -45330607 - L1M4 LINE L1 -5878 977 917 483 307 37 20 chr10 94986308 94986552 -45330213 - L1M4 LINE L1 -6280 575 328 1740 175 0 7 chr10 94986609 94986922 -45329843 - AluSx SINE Alu 0 311 1 1637 154 0 70 chr10 94987016 94987347 -45329418 + AluJo SINE Alu 3 310 -2 292 310 40 10 chr10 94987668 94987768 -45328997 - MIR SINE MIR -79 183 81 361 154 15 0 chr10 94988106 94988171 -45328594 - AluSx SINE Alu -2 300 235 1285 105 11 0 chr10 94988171 94988352 -45328413 - AluSx SINE Alu -129 183 1 757 261 199 29 chr10 94988367 94988793 -45327972 + MLT1G LTR MaLR 43 530 -12 2048 111 19 7 chr10 94989103 94989129 -45327636 - AluSq SINE Alu -2 311 287 387 0 0 0 chr10 94989129 94989172 -45327593 + (TA)n Simple_repeat Simple_repeat 1 43 0 2048 111 19 7 chr10 94989172 94989452 -45327313 - AluSq SINE Alu -26 287 1 439 115 0 0 chr10 94989481 94989542 -45327223 + AluS SINE Alu 2 62 -247 1871 117 7 4 chr10 94989544 94989818 -45326947 - AluSx SINE Alu -7 305 31 803 181 0 14 chr10 94989819 94989957 -45326808 - AluJb SINE Alu -175 137 2 2042 114 0 0 chr10 94990072 94990362 -45326403 + AluSx SINE Alu 12 301 -11 1502 177 23 48 chr10 94990934 94991244 -45325521 + AluJb SINE Alu 1 302 0 1598 202 0 13 chr10 94991305 94991612 -45325153 + AluJb SINE Alu 1 303 -9 1905 133 17 3 chr10 94991637 94991937 -45324828 - AluSq SINE Alu -9 304 1 565 191 45 9 chr10 94992007 94992117 -45324648 + AluJo/FLAM SINE Alu 1 114 -188 2066 95 3 3 chr10 94992117 94992444 -45324321 - AluY SINE Alu 0 327 1 2315 89 0 0 chr10 94992467 94992771 -45323994 + AluSc SINE Alu 5 308 -1 1704 189 0 7 chr10 94992787 94993089 -45323676 + AluJb SINE Alu 1 300 -12 1272 116 0 0 chr10 94993120 94993293 -45323472 + AluSg/x SINE Alu 135 307 -5 750 193 1 4 chr10 94993296 94993437 -45323328 + L1MA6 LINE L1 5691 5831 -333 2144 101 23 0 chr10 94993437 94993743 -45323022 + AluSq SINE Alu 1 313 0 750 193 1 4 chr10 94993743 94993775 -45322990 + L1MA6 LINE L1 5831 5862 -302 1998 118 10 7 chr10 94993838 94994144 -45322621 + AluSg SINE Alu 1 307 -3 913 96 8 0 chr10 94994354 94994479 -45322286 + AluSq/x SINE Alu 9 134 -179 1961 84 81 0 chr10 94994480 94994764 -45322001 + AluY SINE Alu 1 307 -4 2209 153 117 47 chr10 94994766 94994862 -45321903 + L1MB3 LINE L1 5578 5666 -517 1904 124 10 13 chr10 94994862 94995161 -45321604 + AluSx SINE Alu 1 298 -14 2209 153 117 47 chr10 94995161 94995331 -45321434 + L1MB3 LINE L1 5666 5823 -360 1964 103 0 43 chr10 94995331 94995632 -45321133 + AluSx SINE Alu 3 290 -22 258 32 0 0 chr10 94995632 94995663 -45321102 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 2209 153 117 47 chr10 94995663 94995922 -45320843 + L1MB3 LINE L1 5822 6142 -41 2349 61 0 3 chr10 94995922 94996215 -45320550 + AluY SINE Alu 1 292 -19 1724 163 7 3 chr10 94996227 94996527 -45320238 + AluSg SINE Alu 1 301 -9 2205 89 7 0 chr10 94996539 94996832 -45319933 + AluY SINE Alu 2 296 -15 266 206 15 0 chr10 94997290 94997358 -45319407 + CT-rich Low_complexity Low_complexity 3 71 0 1999 120 0 43 chr10 94997364 94997554 -45319211 - AluJb SINE Alu 0 312 140 2214 92 0 0 chr10 94997554 94997848 -45318917 - AluSg SINE Alu -16 294 1 1999 120 0 43 chr10 94997848 94997983 -45318782 - AluJb SINE Alu -172 140 1 914 124 30 55 chr10 94997984 94998069 -45318696 - L1MB3 LINE L1 -43 6140 6054 1747 152 40 7 chr10 94998069 94998365 -45318400 - AluSx SINE Alu -6 306 1 914 124 30 55 chr10 94998365 94998480 -45318285 - L1MB3 LINE L1 -129 6054 5945 299 220 11 77 chr10 94998572 94998663 -45318102 - L1MB3 LINE L1 -199 5969 5885 416 208 0 0 chr10 94998663 94998740 -45318025 - AluSq SINE Alu -2 311 235 913 85 31 15 chr10 94998740 94998870 -45317895 - AluSq SINE Alu -171 142 11 2059 131 0 0 chr10 94998910 94999207 -45317558 - AluSx SINE Alu -15 297 1 199 118 0 59 chr10 94999251 94999302 -45317463 + (CCCCCA)n Simple_repeat Simple_repeat 1 48 0 2317 80 0 6 chr10 94999404 94999716 -45317049 - AluY SINE Alu -1 310 1 1901 101 22 0 chr10 94999716 94999983 -45316782 - AluSg SINE Alu -16 294 22 2156 122 0 0 chr10 95000225 95000536 -45316229 + AluSx SINE Alu 1 311 -1 2174 98 7 0 chr10 95000545 95000842 -45315923 + AluSg SINE Alu 1 299 -11 1672 102 0 0 chr10 95000843 95001068 -45315697 - AluSq SINE Alu -88 225 1 1688 193 3 0 chr10 95001353 95001658 -45315107 + AluJo SINE Alu 1 306 -6 2130 105 0 7 chr10 95001658 95001983 -45314782 + AluSc SINE Alu 1 309 0 1799 94 101 18 chr10 95001986 95002263 -45314502 + AluSx SINE Alu 4 303 -9 2083 132 0 0 chr10 95002865 95003161 -45313604 + AluSg SINE Alu 1 296 -14 2209 175 73 31 chr10 95003259 95003296 -45313469 - L1MB3 LINE L1 -1 6182 6148 2146 103 3 0 chr10 95003296 95003588 -45313177 - AluSx SINE Alu -19 293 1 2209 175 73 31 chr10 95003588 95004099 -45312666 - L1MB3 LINE L1 -35 6148 5611 1664 125 3 90 chr10 95004099 95004162 -45312603 - AluSx SINE Alu -19 293 226 2299 74 3 0 chr10 95004162 95004458 -45312307 - AluY SINE Alu -14 297 1 1664 125 3 90 chr10 95004458 95004587 -45312178 - AluSx SINE Alu -86 226 87 1286 45 0 7 chr10 95004587 95004741 -45312024 - L1PA7 LINE L1 -11 6143 5991 233 0 62 0 chr10 95004746 95004778 -45311987 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1664 125 3 90 chr10 95004778 95004899 -45311866 - AluSx SINE Alu -229 83 1 2165 82 6 31 chr10 95005399 95005534 -45311231 + AluY SINE Alu 1 138 -173 2369 74 0 10 chr10 95005534 95005845 -45310920 + AluY SINE Alu 1 308 -3 2165 82 6 31 chr10 95005845 95006026 -45310739 + AluY SINE Alu 138 309 -2 1908 129 0 13 chr10 95006169 95006471 -45310294 - AluJo SINE Alu -14 298 1 254 292 150 0 chr10 95006471 95006591 -45310174 - MIR SINE MIR -47 215 78 2036 75 6 63 chr10 95006845 95007163 -45309602 - AluSq SINE Alu -12 301 2 1969 146 0 3 chr10 95007166 95007468 -45309297 - AluSx SINE Alu -11 301 1 2331 77 0 10 chr10 95007476 95007786 -45308979 - AluY SINE Alu -4 307 1 2139 109 0 0 chr10 95007834 95008128 -45308637 + AluSx SINE Alu 10 303 -9 21 36 0 0 chr10 95008143 95008171 -45308594 + AT_rich Low_complexity Low_complexity 1 28 0 1924 146 0 0 chr10 95008193 95008487 -45308278 - AluJb SINE Alu -16 296 3 2425 62 0 13 chr10 95008617 95008924 -45307841 - AluY SINE Alu -8 303 1 1318 171 7 36 chr10 95009086 95009360 -45307405 + AluJo SINE Alu 1 266 -46 62 14 0 0 chr10 95009364 95009433 -45307332 + AT_rich Low_complexity Low_complexity 1 69 0 1994 72 47 4 chr10 95010917 95011195 -45305570 - AluSx SINE Alu -22 290 1 912 115 0 0 chr10 95012436 95012566 -45304199 - AluJo SINE Alu -178 134 5 288 0 0 0 chr10 95013247 95013279 -45303486 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2078 111 0 0 chr10 95013489 95013778 -45302987 - AluSg SINE Alu -16 294 6 2011 103 31 3 chr10 95014077 95014368 -45302397 - AluSq SINE Alu -14 299 1 1784 129 77 0 chr10 95014452 95014739 -45302026 - AluSq SINE Alu -4 309 1 791 209 40 0 chr10 95015018 95015166 -45301599 - FRAM SINE Alu -9 157 4 2127 75 7 3 chr10 95015173 95015489 -45301276 - AluSp SINE Alu 0 317 1 1276 147 79 40 chr10 95015511 95015786 -45300979 - AluJo SINE Alu 0 314 30 1034 117 13 0 chr10 95016438 95016592 -45300173 - AluSg/x SINE Alu -1 311 156 1737 53 0 0 chr10 95016595 95016803 -45299962 - AluSq SINE Alu -105 208 1 448 197 63 63 chr10 95016813 95016955 -45299810 - MIR SINE MIR -74 188 47 1524 176 3 32 chr10 95017045 95017357 -45299408 + AluJb SINE Alu 1 303 -9 1892 197 124 45 chr10 95017437 95017944 -45298821 - MLT1F1 LTR MaLR -8 559 13 830 155 23 0 chr10 95017962 95018091 -45298674 - FLAM_C SINE Alu -1 132 1 1867 92 38 0 chr10 95018102 95018364 -45298401 - AluSg SINE Alu -3 307 36 1082 152 0 6 chr10 95018400 95018565 -45298200 + AluSg/x SINE Alu 133 296 -14 1877 116 10 20 chr10 95018629 95018940 -45297825 + AluSx SINE Alu 1 312 0 1581 135 98 7 chr10 95019035 95019309 -45297456 + AluSg SINE Alu 1 299 -11 1767 161 17 17 chr10 95019428 95019727 -45297038 + AluJb SINE Alu 1 299 -13 1601 193 40 7 chr10 95019766 95020062 -45296703 + AluJo SINE Alu 1 306 -6 746 164 0 0 chr10 95020506 95020622 -45296143 - FLAM_C SINE Alu -25 118 3 2185 97 3 0 chr10 95020632 95020922 -45295843 - AluSq SINE Alu -22 291 1 816 138 57 0 chr10 95021417 95021540 -45295225 - AluSq/x SINE Alu -181 131 2 525 164 138 0 chr10 95021683 95021799 -45294966 - L1MB5 LINE L1 0 6174 6043 2337 83 0 0 chr10 95021804 95022106 -45294659 - AluY SINE Alu -9 302 1 868 208 6 6 chr10 95022108 95022267 -45294498 - FRAM SINE Alu -7 159 1 661 193 0 83 chr10 95022335 95022480 -45294285 + FLAM_A SINE Alu 1 133 0 2441 77 0 0 chr10 95022501 95022812 -45293953 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 95022822 95022844 -45293921 + AT_rich Low_complexity Low_complexity 1 22 0 828 155 23 8 chr10 95022850 95022979 -45293786 + AluSq/x SINE Alu 3 133 -179 2419 57 0 7 chr10 95022988 95023287 -45293478 + AluY SINE Alu 1 297 -14 2114 119 0 0 chr10 95023357 95023659 -45293106 - AluSx SINE Alu -10 302 1 803 149 19 149 chr10 95024313 95024447 -45292318 + MER46A DNA MER2_type 1 151 -2580 2698 109 12 92 chr10 95024447 95024517 -45292248 + MER83 LTR ERV1 1 75 -373 2156 120 0 0 chr10 95024517 95024818 -45291947 + AluSq SINE Alu 1 301 -12 2698 109 12 92 chr10 95024818 95025035 -45291730 + MER83 LTR ERV1 75 308 -140 2325 86 0 7 chr10 95025035 95025337 -45291428 + AluSq SINE Alu 1 300 -13 2698 109 12 92 chr10 95025337 95025462 -45291303 + MER83 LTR ERV1 308 372 -76 2064 108 3 16 chr10 95025462 95025768 -45290997 - AluSx SINE Alu -10 302 1 2698 109 12 92 chr10 95025768 95025840 -45290925 + MER83 LTR ERV1 372 448 0 803 149 19 149 chr10 95025840 95025974 -45290791 + MER46A DNA MER2_type 151 234 -2 254 255 163 0 chr10 95025999 95026122 -45290643 - MIR SINE MIR -17 245 99 221 175 0 0 chr10 95026779 95026819 -45289946 + T-rich Low_complexity Low_complexity 1 40 0 2015 117 10 3 chr10 95026961 95027270 -45289495 - AluSx SINE Alu -1 311 1 1494 157 104 0 chr10 95027270 95027538 -45289227 - AluJo SINE Alu -15 297 2 249 196 89 0 chr10 95027822 95027878 -45288887 + MIR SINE MIR 63 123 -85 1974 122 3 3 chr10 95027879 95028174 -45288591 - AluSx SINE Alu -17 295 1 933 129 0 0 chr10 95028179 95028311 -45288454 - FLAM_C SINE Alu -10 133 2 1925 110 28 0 chr10 95028674 95028956 -45287809 - AluSx SINE Alu -18 294 5 942 156 0 13 chr10 95029078 95029232 -45287533 + FRAM SINE Alu 4 155 -21 897 239 17 29 chr10 95029232 95029470 -45287295 - MER58B DNA MER1_type -37 304 70 2070 99 0 7 chr10 95029470 95029762 -45287003 + AluSc SINE Alu 1 290 -19 664 126 0 0 chr10 95029765 95029860 -45286905 - AluJ/FLAM SINE Alu -215 97 3 212 242 0 0 chr10 95029873 95029939 -45286826 + (TA)n Simple_repeat Simple_repeat 1 66 0 1576 146 30 27 chr10 95029939 95030058 -45286707 - L1MB3 LINE L1 -7 6176 6059 2208 90 3 19 chr10 95030058 95030370 -45286395 - AluSx SINE Alu -5 307 1 1576 146 30 27 chr10 95030370 95030551 -45286214 - L1MB3 LINE L1 -124 6059 5875 1310 189 10 42 chr10 95030553 95030860 -45285905 + AluSp SINE Alu 2 298 -5 780 124 0 0 chr10 95030860 95030965 -45285800 + AluSc SINE Alu 132 236 -73 204 259 19 0 chr10 95031201 95031255 -45285510 + MIR SINE MIR 102 156 -106 2253 85 23 0 chr10 95031348 95031653 -45285112 + AluSp SINE Alu 1 312 -1 554 176 0 0 chr10 95032310 95032401 -45284364 + AluJo SINE Alu 122 212 -100 1161 148 36 31 chr10 95032409 95032473 -45284292 - AluJb SINE Alu -115 197 135 2454 65 0 3 chr10 95032473 95032783 -45283982 - AluYa5 SINE Alu -2 309 1 1161 148 36 31 chr10 95032783 95032914 -45283851 - AluJb SINE Alu -177 135 1 1322 211 0 36 chr10 95032915 95033080 -45283685 - AluJo SINE Alu -17 295 144 1862 124 57 0 chr10 95033080 95033363 -45283402 - AluSg SINE Alu -11 299 1 1322 211 0 36 chr10 95033363 95033500 -45283265 - AluJo SINE Alu -168 144 4 2129 94 43 10 chr10 95034210 95034509 -45282256 + AluSg SINE Alu 1 309 -1 2320 88 0 0 chr10 95034878 95035186 -45281579 - AluY SINE Alu -3 308 1 2077 136 0 3 chr10 95035189 95035491 -45281274 - AluSx SINE Alu -11 301 1 1827 166 0 3 chr10 95035669 95035964 -45280801 - AluJo SINE Alu -18 294 1 786 185 0 7 chr10 95035968 95036103 -45280662 - AluJo/FRAM SINE Alu -4 308 175 1588 89 0 5 chr10 95036104 95036318 -45280447 + AluSg/x SINE Alu 88 300 -12 1852 160 3 10 chr10 95036697 95037010 -45279755 - AluJo SINE Alu -1 311 1 2361 80 3 10 chr10 95037501 95037815 -45278950 - AluSp SINE Alu -1 312 1 1120 155 5 25 chr10 95037827 95038007 -45278758 - AluJo SINE Alu 0 312 130 1934 139 7 10 chr10 95038007 95038310 -45278455 - AluSx SINE Alu -8 304 3 2186 114 3 0 chr10 95038310 95038618 -45278147 - AluSp SINE Alu -2 311 3 1120 155 5 25 chr10 95038618 95038636 -45278129 - AluJo SINE Alu -180 132 117 662 246 171 0 chr10 95038653 95038840 -45277925 + MER20 DNA MER1_type 1 219 0 348 127 32 0 chr10 95038918 95038981 -45277784 - MSTB LTR MaLR 0 426 362 1722 162 7 36 chr10 95038990 95039130 -45277635 + AluJb SINE Alu 3 146 -166 2571 38 0 16 chr10 95039130 95039446 -45277319 + AluY SINE Alu 1 311 0 1722 162 7 36 chr10 95039446 95039613 -45277152 + AluJb SINE Alu 146 301 -11 812 147 0 42 chr10 95039613 95039746 -45277019 + L1MB3 LINE L1 6053 6181 -2 2259 102 0 3 chr10 95039755 95040058 -45276707 + AluSg SINE Alu 1 302 -8 2004 114 7 4 chr10 95040067 95040389 -45276376 + AluSq SINE Alu 1 323 0 204 164 284 0 chr10 95040943 95041010 -45275755 + MIR SINE MIR 108 193 -69 1911 125 30 0 chr10 95041168 95041464 -45275301 - AluSx SINE Alu -3 309 5 1112 174 0 0 chr10 95041554 95041749 -45275016 + AluJo SINE Alu 118 312 0 1816 121 0 92 chr10 95041796 95042142 -45274623 - AluYb8 SINE Alu -4 314 1 2475 66 0 0 chr10 95042142 95042443 -45274322 - AluSp SINE Alu -12 301 1 2332 93 0 0 chr10 95042461 95042771 -45273994 - AluY SINE Alu -1 310 1 2216 95 0 10 chr10 95042771 95043074 -45273691 - AluY SINE Alu -8 303 3 22 0 0 0 chr10 95043144 95043166 -45273599 + AT_rich Low_complexity Low_complexity 1 22 0 1327 166 0 85 chr10 95043166 95043461 -45273304 - AluJo SINE Alu -7 305 36 365 253 74 11 chr10 95043856 95043951 -45272814 + MIR SINE MIR 110 210 -52 2213 82 10 0 chr10 95044162 95044453 -45272312 - AluSp SINE Alu -19 294 1 1927 119 7 20 chr10 95044453 95044747 -45272018 - AluSx SINE Alu -22 290 1 855 137 0 0 chr10 95044762 95044893 -45271872 + FLAM_C SINE Alu 11 141 -2 2051 99 0 26 chr10 95044953 95045255 -45271510 - AluSg SINE Alu -16 294 1 1641 161 0 7 chr10 95045260 95045539 -45271226 - AluJb SINE Alu -10 302 26 180 71 0 0 chr10 95045554 95045560 -45271205 + (T)n Simple_repeat Simple_repeat 1 6 -22 1870 151 0 7 chr10 95045560 95045852 -45270913 + AluSx SINE Alu 1 290 -22 180 71 0 0 chr10 95045852 95045873 -45270892 + (T)n Simple_repeat Simple_repeat 5 28 0 351 139 11 178 chr10 95045986 95046061 -45270704 - MER96B DNA MER1_type? -251 166 80 785 148 0 16 chr10 95046061 95046189 -45270576 + FLAM_A SINE Alu 5 130 -3 351 139 11 178 chr10 95046189 95046215 -45270550 - MER96B DNA MER1_type? -337 80 51 2235 96 0 13 chr10 95046215 95046517 -45270248 + AluSq SINE Alu 1 298 -15 351 139 11 178 chr10 95046517 95046594 -45270171 - MER96B DNA MER1_type? -366 51 17 186 43 0 0 chr10 95046936 95046959 -45269806 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 711 174 0 33 chr10 95046960 95047081 -45269684 - FLAM_C SINE Alu -15 118 2 2249 119 0 0 chr10 95047301 95047613 -45269152 - AluSx SINE Alu 0 312 1 2191 102 7 0 chr10 95047613 95047907 -45268858 - AluSx SINE Alu -14 298 3 784 133 0 52 chr10 95048046 95048181 -45268584 + FLAM_C SINE Alu 1 128 -5 835 128 8 0 chr10 95048847 95048972 -45267793 - FRAM SINE Alu -21 155 30 2040 144 7 0 chr10 95049120 95049425 -45267340 + AluJb SINE Alu 1 307 -5 2219 86 3 13 chr10 95049445 95049747 -45267018 - AluSg SINE Alu -9 301 3 2247 97 0 3 chr10 95050294 95050594 -45266171 + AluSq SINE Alu 1 299 -14 1679 167 13 17 chr10 95050604 95050904 -45265861 + AluJo SINE Alu 1 299 -13 2019 108 26 19 chr10 95050954 95051261 -45265504 - AluSx SINE Alu 0 312 4 594 231 156 9 chr10 95051282 95051494 -45265271 - L2 LINE L2 -334 2979 2743 2681 26 3 0 chr10 95052809 95053118 -45263647 + AluYb8 SINE Alu 1 310 -8 704 186 0 0 chr10 95053164 95053277 -45263488 + FRAM SINE Alu 42 154 -22 1769 152 13 25 chr10 95053284 95053599 -45263166 + AluJo SINE Alu 1 311 -1 207 100 0 0 chr10 95053885 95053915 -45262850 + (TA)n Simple_repeat Simple_repeat 1 30 0 2059 95 0 89 chr10 95054232 95054407 -45262358 - AluSx SINE Alu -5 307 118 2308 70 0 20 chr10 95054407 95054709 -45262056 - AluY SINE Alu -8 303 8 2059 95 0 89 chr10 95054709 95054724 -45262041 - AluSx SINE Alu -194 118 103 2365 75 0 0 chr10 95054724 95055019 -45261746 - AluY SINE Alu -16 295 1 2059 95 0 89 chr10 95055019 95055164 -45261601 - AluSx SINE Alu -209 103 1 275 355 0 0 chr10 95055366 95055459 -45261306 - L2 LINE L2 0 3313 3221 2356 80 0 3 chr10 95055459 95055759 -45261006 + AluY SINE Alu 1 299 -12 2379 74 0 0 chr10 95055772 95056071 -45260694 + AluY SINE Alu 10 308 -3 1941 136 31 0 chr10 95056103 95056397 -45260368 - AluSx SINE Alu -9 303 1 632 107 0 0 chr10 95056536 95056620 -45260145 + AluSq/x SINE Alu 42 125 -188 604 132 0 0 chr10 95056624 95056715 -45260050 + FRAM SINE Alu 72 162 -14 1053 100 25 12 chr10 95056715 95056875 -45259890 + AluSq SINE Alu 1 162 -151 1095 135 5 77 chr10 95057243 95057368 -45259397 + AluJo SINE Alu 12 118 -194 2107 118 13 0 chr10 95057368 95057672 -45259093 + AluSx SINE Alu 3 310 -2 1095 135 5 77 chr10 95057672 95057754 -45259011 + AluJo SINE Alu 118 204 -108 1842 82 49 0 chr10 95057755 95058023 -45258742 + AluSp SINE Alu 31 310 0 389 218 177 0 chr10 95058030 95058154 -45258611 + MIR SINE MIR 20 165 -97 210 328 0 0 chr10 95059802 95059860 -45256905 + MIR SINE MIR 16 73 -189 536 211 6 18 chr10 95059956 95060027 -45256738 + CT-rich Low_complexity Low_complexity 1 71 -93 1993 145 16 3 chr10 95060027 95060330 -45256435 - AluSx SINE Alu 0 312 6 536 211 6 18 chr10 95060330 95060424 -45256341 + CT-rich Low_complexity Low_complexity 71 164 0 1893 138 3 20 chr10 95060436 95060734 -45256031 - AluJo SINE Alu -19 293 1 2082 103 23 17 chr10 95060766 95060894 -45255871 + AluSx SINE Alu 1 127 -185 2232 91 13 0 chr10 95060894 95061201 -45255564 + AluY SINE Alu 1 311 0 2082 103 23 17 chr10 95061201 95061372 -45255393 + AluSx SINE Alu 127 302 -10 2332 81 7 3 chr10 95061659 95061968 -45254797 - AluSg SINE Alu 0 310 1 959 115 0 7 chr10 95062085 95062224 -45254541 + FRAM SINE Alu 29 166 -10 241 61 0 0 chr10 95062786 95062819 -45253946 + MIR SINE MIR 111 143 -119 208 139 28 0 chr10 95062999 95063035 -45253730 + G-rich Low_complexity Low_complexity 1 37 0 647 262 47 0 chr10 95063807 95063998 -45252767 + MER20 DNA MER1_type 20 219 0 1964 155 3 0 chr10 95064081 95064384 -45252381 + AluJo SINE Alu 1 304 -8 1953 125 17 3 chr10 95064538 95064827 -45251938 - AluSq SINE Alu -20 293 1 2245 71 19 13 chr10 95064827 95065135 -45251630 - AluY SINE Alu -1 310 1 1613 180 14 7 chr10 95065138 95065433 -45251332 - AluJo SINE Alu -15 297 1 1024 126 0 0 chr10 95065435 95065578 -45251187 - AluJb SINE Alu -25 287 145 597 269 176 55 chr10 95065876 95066240 -45250525 - MLT1J LTR MaLR -4 507 100 988 187 0 11 chr10 95066243 95066425 -45250340 - AluJo SINE Alu -132 180 1 219 341 147 0 chr10 95066534 95066663 -45250102 + L2 LINE L2 3164 3311 -2 2366 75 0 10 chr10 95066855 95067161 -45249604 + AluY SINE Alu 1 303 -8 2050 121 3 13 chr10 95067166 95067471 -45249294 + AluSp SINE Alu 1 302 -11 1048 161 0 0 chr10 95067734 95067896 -45248869 - AluSg/x SINE Alu -14 296 135 900 225 10 34 chr10 95067896 95068105 -45248660 - AluJb SINE Alu -108 204 1 262 189 0 0 chr10 95068126 95068179 -45248586 - L1M3 LINE L1 -610 5561 5509 213 39 0 0 chr10 95068280 95068306 -45248459 + (A)n Simple_repeat Simple_repeat 1 26 0 2013 140 0 0 chr10 95068587 95068879 -45247886 - AluSx SINE Alu -20 292 1 1564 132 107 15 chr10 95068879 95069018 -45247747 - AluJb SINE Alu -15 297 172 189 0 0 0 chr10 95069018 95069039 -45247726 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1751 68 137 12 chr10 95069039 95069287 -45247478 - AluY SINE Alu -32 279 1 1564 132 107 15 chr10 95069287 95069418 -45247347 - AluJb SINE Alu -139 173 1 880 117 39 0 chr10 95069839 95069967 -45246798 + AluJo/FLAM SINE Alu 1 133 -169 2039 118 3 29 chr10 95069970 95070082 -45246683 + AluSx SINE Alu 1 114 -198 2202 94 7 3 chr10 95070082 95070380 -45246385 - AluSq SINE Alu -13 300 2 2039 118 3 29 chr10 95070380 95070580 -45246185 + AluSx SINE Alu 114 305 -7 2166 108 17 0 chr10 95070580 95070876 -45245889 + AluSx SINE Alu 1 301 -11 1624 148 48 42 chr10 95070886 95071196 -45245569 + AluJb SINE Alu 1 312 0 2516 56 0 0 chr10 95071253 95071556 -45245209 + AluY SINE Alu 1 303 -8 498 268 13 13 chr10 95071673 95071830 -45244935 - HAL1 LINE L1 -105 2402 2246 2078 104 0 27 chr10 95071982 95072279 -45244486 - AluSg SINE Alu -21 289 1 2219 102 6 13 chr10 95072279 95072592 -45244173 - AluSx SINE Alu -1 311 1 1962 139 7 0 chr10 95072594 95072881 -45243884 - AluSx SINE Alu -23 289 1 183 290 18 148 chr10 95072905 95073074 -45243691 - MIR3 SINE MIR -60 148 2 271 325 63 8 chr10 95073267 95073393 -45243372 + L2 LINE L2 2910 3042 -271 2381 152 29 103 chr10 95073428 95073535 -45243230 + L1MB3 LINE L1 5558 5671 -512 2301 65 10 23 chr10 95073535 95073841 -45242924 + AluY SINE Alu 1 302 -9 2096 135 7 0 chr10 95073851 95074154 -45242611 + AluSg SINE Alu 1 305 -5 2327 63 0 23 chr10 95074157 95074459 -45242306 + AluY SINE Alu 1 295 -16 2381 152 29 103 chr10 95074459 95074629 -45242136 + L1MB3 LINE L1 5682 5863 -320 1811 188 3 0 chr10 95074629 95074937 -45241828 + AluSx SINE Alu 1 309 -3 2381 152 29 103 chr10 95074937 95075275 -45241490 + L1MB3 LINE L1 5863 6142 -41 1731 111 0 0 chr10 95075275 95075509 -45241256 + AluSq SINE Alu 1 234 -79 430 299 13 25 chr10 95075560 95075711 -45241054 - MIR SINE MIR -65 143 23 226 290 0 75 chr10 95075763 95075856 -45240909 - MIR SINE MIR -69 193 108 688 222 33 0 chr10 95076585 95076738 -45240027 + MIR SINE MIR 26 183 -79 948 189 0 0 chr10 95076738 95076907 -45239858 - FRAM SINE Alu -7 169 1 595 151 0 11 chr10 95076982 95077075 -45239690 + AluJ/FLAM SINE Alu 1 92 -220 1886 126 55 3 chr10 95077179 95077472 -45239293 - AluSg SINE Alu -1 309 2 2491 74 3 0 chr10 95077539 95077851 -45238914 - AluSp SINE Alu 0 313 1 580 227 47 8 chr10 95077857 95077985 -45238780 - FLAM_A SINE Alu 0 142 10 204 267 120 0 chr10 95078103 95078178 -45238587 + MIR SINE MIR 41 124 -138 1272 163 40 116 chr10 95078310 95078572 -45238193 + L1MB3 LINE L1 5428 5650 -533 2516 58 3 0 chr10 95078572 95078884 -45237881 + AluSp SINE Alu 1 313 0 1272 163 40 116 chr10 95078884 95079025 -45237740 + L1MB3 LINE L1 5650 5800 -383 1743 156 44 3 chr10 95079091 95079386 -45237379 - AluJb SINE Alu 0 312 6 2247 146 37 10 chr10 95079400 95079438 -45237327 + L1MB3 LINE L1 5788 5824 -359 2334 93 0 0 chr10 95079438 95079738 -45237027 + AluSc SINE Alu 1 300 -9 2051 121 0 19 chr10 95079742 95080049 -45236716 + AluSq SINE Alu 1 301 -12 2247 146 37 10 chr10 95080049 95080388 -45236377 + L1MB3 LINE L1 5826 6180 -3 356 265 82 61 chr10 95080681 95080877 -45235888 + L1ME3A LINE L1 5963 6162 -8 305 317 20 10 chr10 95080877 95080978 -45235787 + L1ME4a LINE L1 5930 6031 -90 2183 84 3 39 chr10 95081015 95081206 -45235559 - AluSp SINE Alu -14 299 103 2249 83 3 10 chr10 95081206 95081506 -45235259 - AluY SINE Alu -13 298 1 2392 71 0 3 chr10 95081506 95081803 -45234962 - AluY SINE Alu -15 296 1 2183 84 3 39 chr10 95081803 95081920 -45234845 - AluSp SINE Alu -208 105 1 2004 122 14 0 chr10 95081931 95082219 -45234546 - AluSx SINE Alu -20 292 1 1988 152 0 13 chr10 95082296 95082612 -45234153 + AluJo SINE Alu 1 312 0 308 273 34 0 chr10 95082649 95082737 -45234028 + MER3 DNA MER1_type 7 97 -112 1723 160 34 7 chr10 95082754 95083048 -45233717 - AluSx SINE Alu -9 303 2 1100 110 6 29 chr10 95083067 95083240 -45233525 - FRAM SINE Alu -12 164 1 2056 106 0 3 chr10 95083269 95083551 -45233214 - AluSx SINE Alu -31 281 1 241 139 0 0 chr10 95083560 95083603 -45233162 + MER3 DNA MER1_type 157 199 -10 1399 128 113 38 chr10 95083712 95083817 -45232948 + AluJo SINE Alu 9 105 -207 1886 132 0 14 chr10 95083817 95084098 -45232667 + AluSx SINE Alu 3 279 -33 189 0 0 0 chr10 95084100 95084121 -45232644 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1399 128 113 38 chr10 95084121 95084278 -45232487 + AluJo SINE Alu 105 294 -18 2054 109 13 10 chr10 95084278 95084582 -45232183 + AluSq SINE Alu 9 313 0 495 48 0 0 chr10 95085068 95085130 -45231635 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 1766 128 73 10 chr10 95085935 95086224 -45230541 - AluJo SINE Alu -5 307 1 368 253 205 5 chr10 95087173 95087434 -45229331 - L2 LINE L2 -226 3087 2775 2303 93 3 0 chr10 95087434 95087735 -45229030 - AluSp SINE Alu -11 302 1 1027 161 6 0 chr10 95087739 95087901 -45228864 - AluJo/FRAM SINE Alu -16 296 134 2300 91 0 0 chr10 95087901 95088198 -45228567 - AluSx SINE Alu -15 297 1 659 230 344 25 chr10 95088202 95088373 -45228392 + L2 LINE L2 2896 3011 -302 1912 126 40 7 chr10 95088373 95088674 -45228091 - AluSq SINE Alu -2 311 1 1593 161 103 0 chr10 95088674 95088947 -45227818 - AluJo SINE Alu -11 301 1 659 230 344 25 chr10 95088947 95089091 -45227674 + L2 LINE L2 3010 3313 0 204 224 245 10 chr10 95089089 95089187 -45227578 + MIR SINE MIR 11 131 -131 * 1670 179 0 23 chr10 95089290 95089428 -45227337 + AluJo SINE Alu 1 141 -171 2177 127 0 0 chr10 95089428 95089728 -45227037 + AluSx SINE Alu 3 302 -10 1670 179 0 23 chr10 95089728 95089891 -45226874 + AluJo SINE Alu 141 295 -17 2185 111 0 0 chr10 95089891 95090189 -45226576 + AluSg SINE Alu 1 298 -12 716 170 50 0 chr10 95090786 95090945 -45225820 + L1MB5 LINE L1 5945 6111 -63 1447 143 0 5 chr10 95090952 95091175 -45225590 - AluJb SINE Alu -4 308 87 1995 98 62 0 chr10 95091198 95091473 -45225292 - AluSc SINE Alu -17 292 1 1611 136 0 139 chr10 95091487 95091847 -45224918 + AluJo SINE Alu 3 312 0 615 151 0 108 chr10 95091896 95092035 -45224730 - FLAM_C SINE Alu -9 134 11 2166 83 28 17 chr10 95092054 95092344 -45224421 - AluSg SINE Alu -17 293 1 2231 100 3 7 chr10 95092346 95092647 -45224118 - AluSx SINE Alu -12 300 1 224 346 107 24 chr10 95092770 95092975 -45223790 + L2 LINE L2 2534 2755 -559 184 289 144 22 chr10 95093040 95093130 -45223635 + L2 LINE L2 3152 3252 -20 226 238 127 0 chr10 95093228 95093291 -45223474 + MIR SINE MIR 6 76 -186 1951 140 0 52 chr10 95095316 95095515 -45221250 - AluJo SINE Alu 0 312 135 2314 106 0 3 chr10 95095515 95095827 -45220938 + AluSx SINE Alu 1 311 -1 1951 140 0 52 chr10 95095827 95095956 -45220809 - AluJo SINE Alu -177 135 1 326 252 291 0 chr10 95097264 95097391 -45219374 + MIR SINE MIR 99 262 0 1344 119 40 40 chr10 95097464 95097691 -45219074 - AluSg/x SINE Alu -10 302 76 2227 90 10 0 chr10 95097734 95098022 -45218743 - AluSx SINE Alu -21 291 1 324 307 110 43 chr10 95098192 95098446 -45218319 + L2 LINE L2 2917 3187 -85 279 321 69 0 chr10 95098472 95098605 -45218160 + MIR SINE MIR 13 162 -46 277 291 185 7 chr10 95099162 95099313 -45217452 - MIR SINE MIR -28 234 57 2225 109 0 6 chr10 95099404 95099716 -45217049 + AluSx SINE Alu 1 310 -2 2221 95 7 3 chr10 95099727 95100031 -45216734 + AluSg SINE Alu 1 305 -5 210 128 0 0 chr10 95100046 95100085 -45216680 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1464 201 40 4 chr10 95100243 95100521 -45216244 - AluSq SINE Alu -15 288 1 716 214 0 0 chr10 95100638 95100764 -45216001 - FLAM_A SINE Alu -7 126 1 2192 118 0 6 chr10 95101174 95101487 -45215278 + AluSx SINE Alu 1 311 -1 1100 126 16 182 chr10 95101518 95101607 -45215158 + L1MB3 LINE L1 5864 5966 -217 261 0 0 0 chr10 95101607 95101636 -45215129 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1932 131 0 0 chr10 95101642 95101917 -45214848 - AluSx SINE Alu -37 275 1 1100 126 16 182 chr10 95101917 95102077 -45214688 + L1MB3 LINE L1 5971 6156 -27 818 188 0 0 chr10 95102077 95102210 -45214555 + FLAM_C SINE Alu 1 133 0 1100 126 16 182 chr10 95102210 95102287 -45214478 + L1MB3 LINE L1 6156 6133 -50 2228 107 7 0 chr10 95102287 95102586 -45214179 - AluSx SINE Alu -11 301 1 1100 126 16 182 chr10 95102586 95102624 -45214141 + L1MB3 LINE L1 6132 6175 -8 1471 175 0 32 chr10 95102643 95102895 -45213870 + AluJo SINE Alu 38 281 -31 200 31 62 0 chr10 95102899 95102931 -45213834 + A-rich Low_complexity Low_complexity 2 35 0 2122 109 6 6 chr10 95102932 95103243 -45213522 + AluY SINE Alu 1 311 0 615 349 90 28 chr10 95103398 95103822 -45212943 + L1ME LINE L1 4604 5053 -1093 204 40 0 0 chr10 95103852 95103877 -45212888 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1671 147 37 18 chr10 95103879 95104026 -45212739 - AluJo SINE Alu -32 280 124 1549 105 9 13 chr10 95104026 95104255 -45212510 - AluSg/x SINE Alu -16 296 69 1671 147 37 18 chr10 95104255 95104380 -45212385 - AluJo SINE Alu -188 124 3 2229 105 3 0 chr10 95104465 95104769 -45211996 + AluSx SINE Alu 1 305 -7 580 239 142 15 chr10 95104858 95105055 -45211710 - MER58B DNA MER1_type -3 338 117 1757 97 8 8 chr10 95105175 95105432 -45211333 - AluSq SINE Alu -6 307 51 319 105 140 0 chr10 95105451 95105508 -45211257 - AluJo SINE Alu -35 267 203 980 106 0 0 chr10 95105509 95105641 -45211124 + AluJb SINE Alu 2 133 -179 1385 148 19 0 chr10 95105641 95105851 -45210914 - AluJo SINE Alu -98 214 1 460 167 10 31 chr10 95105872 95105968 -45210797 - MER58B DNA MER1_type -239 102 9 320 318 27 144 chr10 95105998 95106144 -45210621 + L1ME LINE L1 5302 5463 -701 1529 193 44 0 chr10 95106144 95106419 -45210346 + AluJb SINE Alu 14 300 -12 320 318 27 144 chr10 95106419 95106476 -45210289 + L1ME LINE L1 5463 5525 -639 2220 117 0 0 chr10 95106476 95106785 -45209980 + AluSx SINE Alu 1 309 -3 2248 79 3 10 chr10 95106785 95107088 -45209677 + AluSp SINE Alu 1 301 -12 320 318 27 144 chr10 95107088 95107250 -45209515 + L1ME LINE L1 5523 5635 -529 2297 95 0 3 chr10 95107350 95107656 -45209109 + AluSg SINE Alu 5 309 -1 691 164 69 13 chr10 95107925 95108084 -45208681 + MER58B DNA MER1_type 78 245 -96 320 147 80 0 chr10 95108102 95108177 -45208588 + L1MA10 LINE L1 6254 6334 0 730 167 0 0 chr10 95108177 95108291 -45208474 + FLAM_C SINE Alu 2 115 -18 304 241 51 0 chr10 95108367 95108446 -45208319 + MER58B DNA MER1_type 247 329 -12 2066 107 13 20 chr10 95108577 95108875 -45207890 - AluSx SINE Alu -16 296 1 23 0 0 0 chr10 95108886 95108909 -45207856 + AT_rich Low_complexity Low_complexity 1 23 0 191 278 148 19 chr10 95108967 95109075 -45207690 + L2 LINE L2 2922 3043 -270 2091 105 0 10 chr10 95109076 95109370 -45207395 + AluSg SINE Alu 5 295 -15 722 220 14 21 chr10 95109499 95109640 -45207125 - AluJb SINE Alu -49 263 124 339 309 11 0 chr10 95109641 95109735 -45207030 - MIR SINE MIR -77 185 91 2087 86 0 0 chr10 95109735 95110004 -45206761 + AluSx SINE Alu 44 312 0 1925 126 31 0 chr10 95110496 95110782 -45205983 - AluSx SINE Alu -1 311 17 324 253 19 46 chr10 95110786 95110895 -45205870 + MIR SINE MIR 48 159 -49 311 256 30 78 chr10 95110919 95111074 -45205691 - MIR SINE MIR -51 211 65 2207 96 3 0 chr10 95111108 95111401 -45205364 - AluSq SINE Alu -19 294 1 2164 91 7 0 chr10 95111422 95111709 -45205056 - AluSx SINE Alu -23 289 1 721 256 124 55 chr10 95111913 95112152 -45204613 + MLT1K LTR MaLR 193 465 -123 1777 182 0 7 chr10 95112152 95112454 -45204311 + AluJo SINE Alu 7 306 -6 721 256 124 55 chr10 95112454 95112561 -45204204 + MLT1K LTR MaLR 465 563 -25 2306 82 3 3 chr10 95112799 95113105 -45203660 - AluSx SINE Alu -6 306 1 181 176 34 50 chr10 95116064 95116183 -45200582 + (TCTCTG)n Simple_repeat Simple_repeat 4 120 0 2388 76 3 0 chr10 95116426 95116728 -45200037 - AluSp SINE Alu -10 303 1 471 284 19 39 chr10 95116732 95116887 -45199878 - MIR SINE MIR -65 197 46 212 236 8 79 chr10 95117463 95117590 -45199175 + (CAGGG)n Simple_repeat Simple_repeat 5 122 0 27 73 0 0 chr10 95117977 95118032 -45198733 + GC_rich Low_complexity Low_complexity 1 55 0 205 244 0 35 chr10 95118205 95118291 -45198474 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 418 199 0 0 chr10 95118443 95118531 -45198234 + MIR SINE MIR 105 191 -62 823 142 0 0 chr10 95118682 95118802 -45197963 + FLAM_C SINE Alu 6 125 -18 1340 173 56 72 chr10 95118824 95118981 -45197784 + AluJo SINE Alu 1 152 -160 2187 111 0 0 chr10 95118981 95119279 -45197486 + AluSx SINE Alu 13 310 -2 1340 173 56 72 chr10 95119279 95119427 -45197338 + AluJo SINE Alu 152 301 -11 370 287 40 10 chr10 95119460 95119561 -45197204 + L2 LINE L2 3168 3271 -42 195 100 0 0 chr10 95119979 95120009 -45196756 + (TCC)n Simple_repeat Simple_repeat 1 30 0 284 172 35 0 chr10 95120083 95120141 -45196624 - MIR SINE MIR -99 163 104 2066 101 9 28 chr10 95120235 95120553 -45196212 + AluSx SINE Alu 1 312 0 244 276 66 26 chr10 95123256 95123332 -45193433 + L2 LINE L2 3176 3254 -18 181 263 0 92 chr10 95124795 95124871 -45191894 + L2 LINE L2 3027 3095 -177 1762 176 0 7 chr10 95124896 95125191 -45191574 - AluJo SINE Alu -11 301 9 1011 118 12 19 chr10 95125562 95125723 -45191042 - L1PA7 LINE L1 -1 6153 5994 1399 103 98 9 chr10 95125728 95125942 -45190823 - AluSg SINE Alu -19 291 59 21 0 0 0 chr10 95226257 95226278 -45090487 + AT_rich Low_complexity Low_complexity 1 21 0 1653 88 26 13 chr10 95226278 95226531 -45090234 - AluSp SINE Alu 0 311 56 5811 78 8 6 chr10 95227144 95227949 -45088816 - L1P LINE L1 -3024 3122 2317 180 152 0 0 chr10 95228745 95228778 -45087987 + (TAA)n Simple_repeat Simple_repeat 2 34 0 887 199 142 8 chr10 95228826 95229093 -45087672 - AluSg SINE Alu -7 303 1 946 102 55 0 chr10 95229843 95229970 -45086795 + AluSx SINE Alu 1 134 -178 37 23 0 0 chr10 95229970 95230014 -45086751 + AT_rich Low_complexity Low_complexity 1 44 0 1356 111 11 0 chr10 95230018 95230208 -45086557 + AluSx SINE Alu 118 309 -3 1342 94 0 0 chr10 95230209 95230379 -45086386 + LTR8 LTR ERV1 522 691 0 531 183 76 15 chr10 95230380 95230511 -45086254 + L1MD1 LINE L1 6103 6241 -1 582 289 103 63 chr10 95230892 95231385 -45085380 - L1ME4a LINE L1 -30 6091 5552 2229 87 0 48 chr10 95231385 95231697 -45085068 + AluSc SINE Alu 1 297 -12 582 289 103 63 chr10 95231697 95231998 -45084767 - L1ME4a LINE L1 -569 5552 5265 272 329 77 26 chr10 95232300 95232534 -45084231 + L2 LINE L2 2860 3105 -208 713 275 113 80 chr10 95232818 95233465 -45083300 + HAL1 LINE L1 303 970 -1537 * 7177 39 16 0 chr10 95233460 95234409 -45082356 - L1P LINE L1 -3796 2350 1387 742 160 58 11 chr10 95234510 95234698 -45082067 + L1P LINE L1 78 274 -5872 21 0 0 0 chr10 95234860 95234881 -45081884 + AT_rich Low_complexity Low_complexity 1 21 0 730 275 111 8 chr10 95235218 95235462 -45081303 - L2 LINE L2 -1930 1384 1116 471 322 116 34 chr10 95235483 95235803 -45080962 + L2 LINE L2 2927 3272 0 1808 202 28 3 chr10 95236352 95236708 -45080057 - MLT1A1 LTR MaLR 0 365 1 454 340 57 0 chr10 95236731 95236890 -45079875 + MIR3 SINE MIR 34 201 -7 3166 150 34 4 chr10 95237377 95237911 -45078854 - MER44D DNA MER2_type 0 605 1 342 231 55 0 chr10 95238313 95238420 -45078345 + MIR SINE MIR 71 191 -17 309 256 95 113 chr10 95238914 95239188 -45077577 - L2 LINE L2 0 3313 3045 575 170 18 70 chr10 95239191 95239362 -45077403 + MLT1E2 LTR MaLR 1 162 -464 1426 188 208 0 chr10 95239535 95239896 -45076869 - L1P LINE L1 -2454 3692 3257 243 173 0 0 chr10 95239881 95239933 -45076832 - L1 LINE L1 -2533 3613 3562 * 9366 194 40 25 chr10 95239936 95243742 -45073023 - L1PA12 LINE L1 -2662 4922 1 216 158 0 0 chr10 95244234 95244272 -45072493 + (TA)n Simple_repeat Simple_repeat 2 39 0 242 152 0 0 chr10 95244284 95244330 -45072435 + L1MC4 LINE L1 6658 6703 -1339 444 208 228 0 chr10 95244665 95244814 -45071951 - MER5A DNA MER1_type 0 189 7 655 267 0 53 chr10 95244824 95245011 -45071754 - MER5B DNA MER1_type -1 177 1 804 27 0 36 chr10 95245686 95245797 -45070968 - L1PA3 LINE L1 0 6155 6049 810 120 75 5 chr10 95245799 95245999 -45070766 + L1P LINE L1 20 233 -5913 258 348 54 16 chr10 95246651 95246835 -45069930 - L2 LINE L2 -936 2378 2188 23 0 0 0 chr10 95247596 95247619 -45069146 + AT_rich Low_complexity Low_complexity 1 23 0 1142 141 16 42 chr10 95247672 95247863 -45068902 + MER5A DNA MER1_type 4 189 0 339 233 262 0 chr10 95248150 95248253 -45068512 - MIR SINE MIR -113 149 20 22 0 0 0 chr10 95248269 95248291 -45068474 + AT_rich Low_complexity Low_complexity 1 22 0 237 31 0 172 chr10 95248386 95248450 -45068315 + L1MB4 LINE L1 6128 6180 0 374 271 39 23 chr10 95248450 95248579 -45068186 - MER5B DNA MER1_type -27 151 21 843 277 156 16 chr10 95248696 95249061 -45067704 - L2 LINE L2 -6 3307 2892 363 301 0 45 chr10 95249059 95249192 -45067573 - L2 LINE L2 -676 2638 2512 * 476 82 22 52 chr10 95249519 95249653 -45067112 + (TA)n Simple_repeat Simple_repeat 2 131 0 27 62 0 0 chr10 95250021 95250069 -45066696 + AT_rich Low_complexity Low_complexity 1 48 0 225 0 0 0 chr10 95250619 95250644 -45066121 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr10 95251407 95251430 -45065335 + AT_rich Low_complexity Low_complexity 1 23 0 282 245 0 0 chr10 95251439 95251492 -45065273 - L2 LINE L2 -36 3236 3184 351 351 110 10 chr10 95251576 95251949 -45064816 + L2 LINE L2 2175 2637 -677 799 208 16 73 chr10 95253095 95253287 -45063478 + MER5A DNA MER1_type 9 189 0 241 298 75 0 chr10 95253399 95253493 -45063272 - MIR SINE MIR -14 248 148 532 288 43 42 chr10 95253499 95253777 -45062988 - L2 LINE L2 -10 3303 2959 223 264 287 0 chr10 95253777 95253864 -45062901 - MIR SINE MIR -115 147 36 21 57 0 0 chr10 95253954 95253989 -45062776 + AT_rich Low_complexity Low_complexity 1 35 0 183 162 0 0 chr10 95254832 95254869 -45061896 + (TA)n Simple_repeat Simple_repeat 1 37 0 1759 138 3 58 chr10 95254940 95255251 -45061514 - AluJb SINE Alu -18 294 1 878 127 0 8 chr10 95255253 95255379 -45061386 - AluJo/FLAM SINE Alu -187 125 1 3148 227 223 76 chr10 95255619 95257516 -45059249 - L2 LINE L2 -145 3168 993 26 0 0 0 chr10 95257737 95257763 -45059002 + AT_rich Low_complexity Low_complexity 1 26 0 614 206 206 42 chr10 95259022 95259236 -45057529 - MIR SINE MIR -11 251 3 368 257 29 29 chr10 95259518 95259623 -45057142 - MER5B DNA MER1_type -73 105 1 1758 154 29 32 chr10 95259763 95259906 -45056859 + AluJo SINE Alu 1 143 -169 2525 109 5 19 chr10 95259906 95260274 -45056491 + THE1B LTR MaLR 2 364 0 1758 154 29 32 chr10 95260274 95260441 -45056324 + AluJo SINE Alu 143 310 -2 219 377 39 7 chr10 95260497 95260651 -45056114 + MIR SINE MIR 4 162 -100 376 267 84 79 chr10 95261377 95261579 -45055186 + MIR SINE MIR 49 251 -11 2295 95 0 3 chr10 95261794 95262089 -45054676 + AluSx SINE Alu 2 295 -17 1264 151 83 0 chr10 95262279 95262571 -45054194 - MER33 DNA MER1_type -13 311 1 345 100 0 0 chr10 95262914 95262964 -45053801 + (T)n Simple_repeat Simple_repeat 1 50 0 407 238 174 117 chr10 95263353 95263634 -45053131 + L2 LINE L2 3017 3313 0 279 209 52 52 chr10 95265269 95265384 -45051381 - AluSp SINE Alu -188 115 1 251 267 59 50 chr10 95265403 95265504 -45051261 - MIR3 SINE MIR -25 183 82 653 224 139 6 chr10 95265889 95266054 -45050711 + MER5A DNA MER1_type 3 189 0 1134 168 34 5 chr10 95266106 95266315 -45050450 + MER20 DNA MER1_type 1 215 -4 848 224 118 48 chr10 95266652 95266982 -45049783 - L1MC4 LINE L1 0 8042 7690 255 260 52 0 chr10 95266989 95267066 -45049699 + HAL1 LINE L1 48 128 -2379 185 349 63 0 chr10 95267070 95267133 -45049632 + L2 LINE L2 3241 3307 -6 430 150 442 14 chr10 95267492 95267639 -45049126 + HAL1 LINE L1 1657 1866 -641 718 189 107 40 chr10 95267645 95267959 -45048806 + Charlie5 DNA MER1_type 2 2584 -28 4660 245 46 25 chr10 95268002 95269543 -45047222 - L2 LINE L2 -2 3311 1743 1334 261 76 17 chr10 95269887 95270358 -45046407 + MLT1E2 LTR MaLR 124 622 -4 2403 239 76 41 chr10 95270360 95271060 -45045705 - L2 LINE L2 -307 3006 2275 2133 178 42 32 chr10 95271060 95271560 -45045205 + MLT1D LTR MaLR 1 505 0 2403 239 76 41 chr10 95271560 95271700 -45045065 - L2 LINE L2 -1038 2275 2141 1163 228 162 20 chr10 95271702 95272153 -45044612 - L2 LINE L2 -1590 1724 1210 285 146 0 0 chr10 95272365 95272413 -45044352 + (TA)n Simple_repeat Simple_repeat 2 49 0 207 0 0 0 chr10 95272413 95272436 -45044329 + (GA)n Simple_repeat Simple_repeat 2 24 0 525 154 55 0 chr10 95272438 95272529 -45044236 - AluJ SINE Alu -34 278 183 877 121 16 8 chr10 95272538 95272662 -45044103 - AluJ SINE Alu -187 125 1 350 318 31 31 chr10 95272695 95272887 -45043878 - LTR16C LTR ERVL 0 491 300 434 264 125 68 chr10 95273378 95273658 -45043107 + L2 LINE L2 2921 3216 -97 221 308 132 11 chr10 95273787 95273878 -45042887 - L2 LINE L2 -29 3243 3142 486 179 25 70 chr10 95274003 95274175 -45042590 - MLT1F1 LTR MaLR 0 567 411 283 335 79 7 chr10 95274373 95274525 -45042240 - MIR SINE MIR -19 243 81 594 244 104 16 chr10 95274861 95275054 -45041711 - L2 LINE L2 -1 3312 3103 433 277 145 28 chr10 95275066 95275408 -45041357 + L2 LINE L2 2711 3081 -232 825 215 185 13 chr10 95276147 95276449 -45040316 - LTR16A LTR ERVL 0 450 97 304 291 12 12 chr10 95276626 95276712 -45040053 - MIR3 SINE MIR -3 205 120 1366 285 21 8 chr10 95276734 95277110 -45039655 - LTR16C LTR ERVL -2 489 109 303 353 89 11 chr10 95277598 95277788 -45038977 + MIR SINE MIR 2 206 -56 1146 177 84 29 chr10 95278037 95278397 -45038368 - MSTC LTR MaLR 0 428 4 649 315 70 17 chr10 95278897 95279138 -45037627 + MIR SINE MIR 4 252 -10 277 281 0 0 chr10 95279190 95279247 -45037518 + MIR SINE MIR 5 61 -201 622 277 11 0 chr10 95279320 95279497 -45037268 + MIR SINE MIR 84 262 0 1437 201 71 49 chr10 95280165 95280617 -45036148 + LTR37B LTR ERV1 7 468 0 259 220 0 0 chr10 95281172 95281222 -45035543 + L3 LINE CR1 1480 1529 -48 204 316 30 53 chr10 95281315 95281448 -45035317 + L2 LINE L2 3126 3255 -58 180 0 0 0 chr10 95282228 95282248 -45034517 + (CA)n Simple_repeat Simple_repeat 2 21 0 1504 117 0 48 chr10 95282634 95282865 -45033900 + AluSq SINE Alu 1 220 -93 652 147 18 0 chr10 95282866 95282975 -45033790 + AluSg/x SINE Alu 190 300 -12 321 309 64 0 chr10 95283067 95283161 -45033604 - L2 LINE L2 -13 3300 3201 1078 253 113 16 chr10 95283658 95284022 -45032743 + L2 LINE L2 2883 3281 -32 3175 216 96 54 chr10 95284256 95285278 -45031487 - L1MC4 LINE L1 -6 8036 6972 289 103 121 17 chr10 95285391 95285449 -45031316 - MER5A DNA MER1_type -107 82 19 817 176 46 8 chr10 95286264 95286395 -45030370 + AluJo SINE Alu 2 137 -175 2681 10 0 0 chr10 95286412 95286701 -45030064 + AluYb8 SINE Alu 1 289 -29 194 367 17 0 chr10 95287923 95287983 -45028782 + L2 LINE L2 3250 3310 -3 234 356 43 37 chr10 95288641 95288804 -45027961 - L2 LINE L2 -337 2977 2814 592 315 20 36 chr10 95288848 95289099 -45027666 + MIR SINE MIR 14 260 -2 217 245 0 0 chr10 95290254 95290303 -45026462 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 2097 80 6 73 chr10 95290409 95290722 -45026043 - AluSp SINE Alu -21 292 1 652 215 168 38 chr10 95290798 95290957 -45025808 + MLT1C LTR MaLR 1 195 -272 1858 161 20 26 chr10 95290957 95291261 -45025504 + AluJb SINE Alu 1 302 -10 652 215 168 38 chr10 95291261 95291310 -45025455 + MLT1C LTR MaLR 195 236 -231 286 314 145 65 chr10 95292956 95293711 -45023054 - L2 LINE L2 0 3272 2456 2332 75 3 7 chr10 95293977 95294269 -45022496 - AluY SINE Alu -20 291 1 2243 103 0 0 chr10 95294732 95295024 -45021741 - AluSq SINE Alu -21 292 1 411 312 43 0 chr10 95295105 95295243 -45021522 + MIR3 SINE MIR 44 187 -21 2122 124 10 0 chr10 95295566 95295865 -45020900 - AluSg SINE Alu -8 302 1 1724 226 96 37 chr10 95297678 95298188 -45018577 - MLT1H LTR MaLR -8 541 2 465 19 0 0 chr10 95299222 95299276 -45017489 + (TA)n Simple_repeat Simple_repeat 1 54 0 186 43 0 0 chr10 95300351 95300374 -45016391 + (T)n Simple_repeat Simple_repeat 1 23 0 1315 286 175 20 chr10 95301126 95301840 -45014925 - L2 LINE L2 -1509 1805 981 657 76 0 0 chr10 95302607 95302699 -45014066 + (TAGA)n Simple_repeat Simple_repeat 3 94 0 36 53 0 0 chr10 95302943 95303000 -45013765 + AT_rich Low_complexity Low_complexity 1 57 0 647 238 95 40 chr10 95303497 95303749 -45013016 - MLT1H LTR MaLR -8 541 276 200 294 59 15 chr10 95304289 95304357 -45012408 + L2 LINE L2 3141 3211 -61 267 312 7 28 chr10 95304831 95304972 -45011793 + CT-rich Low_complexity Low_complexity 5 142 0 205 309 0 12 chr10 95305077 95305158 -45011607 + CT-rich Low_complexity Low_complexity 3 82 0 1972 203 13 20 chr10 95305361 95305751 -45011014 - MLT1B LTR MaLR -3 387 1 507 271 105 6 chr10 95305763 95305944 -45010821 + MIR SINE MIR 38 236 -26 633 311 107 38 chr10 95306518 95307162 -45009603 - L2 LINE L2 -17 3255 2566 216 291 17 60 chr10 95309137 95309254 -45007511 + MIR3 SINE MIR 2 113 -95 450 204 23 0 chr10 95309968 95310056 -45006709 + Zaphod DNA AcHobo 3942 4031 0 192 300 0 0 chr10 95310111 95310161 -45006604 - L2 LINE L2 -9 3304 3255 406 268 106 16 chr10 95310575 95310698 -45006067 + L2 LINE L2 3138 3271 -1 501 263 137 43 chr10 95311055 95311531 -45005234 + L1MC4a LINE L1 5589 6106 -15 517 283 7 20 chr10 95311557 95311709 -45005056 + L2 LINE L2 3158 3307 -6 198 0 0 0 chr10 95313254 95313276 -45003489 + (A)n Simple_repeat Simple_repeat 1 22 0 387 266 121 0 chr10 95313516 95313640 -45003125 + MIR SINE MIR 14 152 -110 2891 106 22 2 chr10 95313683 95314097 -45002668 + L1MA3 LINE L1 5884 6305 0 315 316 9 9 chr10 95314494 95314608 -45002157 - MER81 DNA DNA 0 114 1 332 257 101 50 chr10 95315730 95315909 -45000856 + MIR3 SINE MIR 21 208 0 452 247 120 27 chr10 95316167 95316317 -45000448 - MER5B DNA MER1_type -13 165 2 853 163 169 0 chr10 95316328 95316488 -45000277 + MER5A DNA MER1_type 3 189 0 231 36 0 0 chr10 95317226 95317254 -44999511 + (TC)n Simple_repeat Simple_repeat 2 29 0 2035 181 92 51 chr10 95317392 95317422 -44999343 - MLT2B3 LTR ERVL -8 546 519 360 0 0 0 chr10 95317422 95317462 -44999303 + (TG)n Simple_repeat Simple_repeat 2 41 0 2035 181 92 51 chr10 95317462 95317483 -44999282 - MLT2B3 LTR ERVL -35 519 500 428 0 19 0 chr10 95317483 95317535 -44999230 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2035 181 92 51 chr10 95317535 95317951 -44998814 - MLT2B3 LTR ERVL -54 500 59 2371 65 269 0 chr10 95317968 95318321 -44998444 - LTR7 LTR ERV1 -2 448 1 2065 130 79 14 chr10 95318321 95318689 -44998076 - HERVH LTR ERV1 0 7713 7322 1453 113 17 30 chr10 95318673 95318903 -44997862 - HERVH LTR ERV1 -1887 5826 5600 * 865 200 7 0 chr10 95318904 95319059 -44997706 - HERVH LTR ERV1 -2564 5149 4994 6491 118 22 5 chr10 95319059 95320555 -44996210 - HERVH LTR ERV1 -1805 5286 3492 955 132 6 19 chr10 95320545 95320704 -44996061 - HERVH LTR ERV1 -4423 3290 3134 * 1197 133 0 10 chr10 95320680 95320876 -44995889 - HERVH LTR ERV1 -4718 2995 2802 366 24 0 0 chr10 95320982 95321024 -44995741 - LTR7 LTR ERV1 -408 42 1 279 196 0 0 chr10 95321025 95321076 -44995689 - MLT2B3 LTR ERVL -503 51 1 229 270 54 0 chr10 95321301 95321375 -44995390 + MLT1K LTR MaLR 511 588 0 1094 200 131 14 chr10 95321531 95321635 -44995130 - L1ME3A LINE L1 -2 6160 6070 1821 167 0 25 chr10 95321635 95321952 -44994813 + AluJo SINE Alu 1 309 -3 1094 200 131 14 chr10 95321952 95322196 -44994569 - L1ME3A LINE L1 -92 6070 5770 505 271 77 32 chr10 95322803 95323024 -44993741 - MLT1L LTR MaLR -384 231 1 2300 111 13 0 chr10 95324587 95324893 -44991872 + AluSx SINE Alu 1 310 -2 287 281 61 0 chr10 95325357 95325439 -44991326 + L2 LINE L2 3186 3272 0 807 248 30 81 chr10 95326220 95326515 -44990250 + MLT1H1 LTR MaLR 24 303 -252 606 256 8 8 chr10 95326529 95326654 -44990111 + AluJb SINE Alu 2 126 -186 180 77 0 0 chr10 95326661 95326687 -44990078 + (A)n Simple_repeat Simple_repeat 1 26 0 776 215 168 0 chr10 95326689 95326903 -44989862 + MLT1H1 LTR MaLR 287 536 -6 2166 118 13 0 chr10 95327071 95327377 -44989388 + AluSx SINE Alu 1 310 -2 448 267 203 5 chr10 95328472 95328659 -44988106 + MIR SINE MIR 27 250 -12 217 321 54 0 chr10 95329037 95329093 -44987672 - MER91 DNA MER1_type -2 138 80 387 0 0 0 chr10 95329726 95329769 -44986996 + (TA)n Simple_repeat Simple_repeat 1 43 0 761 270 66 13 chr10 95330201 95330427 -44986338 - MIR SINE MIR 0 262 25 808 151 0 36 chr10 95330631 95330770 -44985995 + AluSg/x SINE Alu 173 306 -6 257 310 62 47 chr10 95331691 95331820 -44984945 - L2 LINE L2 -38 3234 3104 291 150 138 50 chr10 95332009 95332089 -44984676 + L1ME3A LINE L1 6084 6170 0 2225 130 21 13 chr10 95332346 95332470 -44984295 + L1MA5 LINE L1 5921 6043 -257 2007 112 0 0 chr10 95332470 95332729 -44984036 + AluSx SINE Alu 39 297 -15 2225 130 21 13 chr10 95332729 95332981 -44983784 + L1MA5 LINE L1 6043 6300 0 599 168 84 26 chr10 95333452 95333607 -44983158 + MER53 DNA DNA 19 182 -7 13586 30 7 1 chr10 95333758 95336207 -44980558 - L1PA3 LINE L1 0 6155 3691 4631 22 40 0 chr10 95336207 95336711 -44980054 - SVA Other Other -3 1383 860 24 32 0 0 chr10 95337219 95337250 -44979515 + AT_rich Low_complexity Low_complexity 1 31 0 1213 139 15 5 chr10 95339305 95339506 -44977259 - L1PA15 LINE L1 -7 6158 5956 914 197 11 6 chr10 95339935 95340113 -44976652 - MER58A DNA MER1_type -26 198 20 270 0 0 0 chr10 95340327 95340357 -44976408 + (TG)n Simple_repeat Simple_repeat 2 31 0 252 152 0 0 chr10 95340357 95340403 -44976362 + L1M4 LINE L1 5229 5274 -872 191 320 40 30 chr10 95340641 95340741 -44976024 + L2 LINE L2 3153 3253 -60 3833 217 67 30 chr10 95340859 95341900 -44974865 + L1MB7 LINE L1 5 1091 -5455 1198 157 5 5 chr10 95341900 95342110 -44974655 + MER2 DNA MER2_type 1 210 -135 24 53 0 0 chr10 95342110 95342148 -44974617 + AT_rich Low_complexity Low_complexity 1 38 0 2485 227 57 21 chr10 95342203 95343010 -44973755 + L1MB7 LINE L1 1099 1934 -4712 1502 183 80 27 chr10 95343008 95343562 -44973203 + L1MB7 LINE L1 5563 6143 -529 * 495 140 20 40 chr10 95343573 95343673 -44973092 - Tigger7 DNA MER2_type 0 2487 2390 1370 190 19 15 chr10 95343675 95343938 -44972827 - Tigger7 DNA MER2_type -2223 264 1 2102 171 50 2 chr10 95343941 95344379 -44972386 + L1MB7 LINE L1 6150 6608 -74 659 113 350 23 chr10 95344485 95344662 -44972103 - MER46A DNA MER2_type 0 236 2 198 228 0 14 chr10 95345272 95345338 -44971427 - MIR SINE MIR -38 170 106 7304 31 9 8 chr10 95345575 95347121 -44969644 + L1PA4 LINE L1 4616 6155 0 1995 134 7 16 chr10 95348268 95348575 -44968190 + AluSx SINE Alu 1 304 -8 217 277 0 31 chr10 95351512 95351577 -44965188 + L3 LINE CR1 1510 1572 -5 1180 239 151 47 chr10 95352777 95353636 -44963129 + L2 LINE L2 2367 3313 0 279 157 0 0 chr10 95354202 95354253 -44962512 + (TG)n Simple_repeat Simple_repeat 2 52 0 514 295 147 6 chr10 95355137 95355293 -44961472 - MER5A DNA MER1_type -3 186 9 294 218 45 91 chr10 95355368 95355478 -44961287 - L3 LINE CR1 -3 1574 1470 706 236 98 46 chr10 95355563 95355910 -44960855 - L1ME4a LINE L1 -288 5833 5469 256 240 40 0 chr10 95355959 95356059 -44960706 - L1ME4a LINE L1 -840 5306 5203 25 31 0 0 chr10 95357225 95357257 -44959508 + AT_rich Low_complexity Low_complexity 1 32 0 716 145 77 0 chr10 95358484 95358601 -44958164 + FLAM_C SINE Alu 1 126 -17 2063 160 0 0 chr10 95358612 95358924 -44957841 + AluJb SINE Alu 1 312 0 255 156 22 67 chr10 95359884 95359974 -44956791 + (TATAA)n Simple_repeat Simple_repeat 4 89 0 316 195 93 34 chr10 95360075 95360193 -44956572 - L1MC4 LINE L1 0 8042 7918 452 315 74 37 chr10 95360266 95360564 -44956201 + L1MB7 LINE L1 4541 4849 -1297 558 266 64 5 chr10 95360789 95360977 -44955788 - L2 LINE L2 -244 3069 2871 290 297 81 39 chr10 95361268 95361527 -44955238 + L1MB7 LINE L1 5255 5524 -2284 2250 86 0 48 chr10 95361563 95361877 -44954888 - AluSc SINE Alu -10 299 1 5024 82 45 46 chr10 95362670 95363711 -44953054 - SVA Other Other -518 868 38 252 0 0 0 chr10 95363715 95363743 -44953022 + (AGGGGG)n Simple_repeat Simple_repeat 6 33 0 28557 47 2 2 chr10 95363743 95367444 -44949321 - L1P LINE L1 -2446 3700 1 21 57 0 0 chr10 95367454 95367489 -44949276 + AT_rich Low_complexity Low_complexity 1 35 0 5742 232 34 39 chr10 95367534 95369248 -44947517 + L1M4 LINE L1 4 1709 -4833 1756 97 0 0 chr10 95369258 95369484 -44947281 + AluSx SINE Alu 1 226 -86 4345 78 40 13 chr10 95369485 95370104 -44946661 + L1PA8A LINE L1 5496 6131 0 2300 186 69 7 chr10 95370104 95370642 -44946123 + L1MB7 LINE L1 5598 6168 -16 307 311 61 6 chr10 95370910 95371090 -44945675 - L1MC/D LINE L1 -2000 5808 5619 441 256 68 15 chr10 95371120 95371253 -44945512 + MIR3 SINE MIR 3 142 -66 213 273 106 0 chr10 95372188 95372254 -44944511 + L2 LINE L2 3221 3293 -20 21 36 0 0 chr10 95372443 95372471 -44944294 + AT_rich Low_complexity Low_complexity 1 28 0 1637 121 67 4 chr10 95372487 95372766 -44943999 - AluSx SINE Alu 0 321 28 954 158 0 32 chr10 95373212 95373370 -44943395 + FAM SINE Alu 10 162 -23 235 163 41 0 chr10 95373450 95373499 -44943266 + MER58 DNA MER1_type 2355 2405 -15 2391 148 38 14 chr10 95374660 95375037 -44941728 + MSTA LTR MaLR 1 368 -60 222 62 0 0 chr10 95375037 95375069 -44941696 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1743 171 24 10 chr10 95375069 95375362 -44941403 - AluJb SINE Alu -15 297 1 2391 148 38 14 chr10 95375362 95375401 -44941364 + MSTA LTR MaLR 367 428 0 189 0 0 0 chr10 95376085 95376106 -44940659 + (A)n Simple_repeat Simple_repeat 1 21 0 361 354 71 26 chr10 95376106 95376332 -44940433 + L1MEd LINE L1 331 566 -5553 989 174 0 0 chr10 95376341 95376502 -44940263 + FRAM SINE Alu 1 157 -19 2134 113 3 3 chr10 95376515 95376806 -44939959 + AluSx SINE Alu 10 300 -12 1877 139 49 7 chr10 95376808 95377122 -44939643 + AluSx SINE Alu 1 312 0 1896 125 35 14 chr10 95377125 95377413 -44939352 + AluJb SINE Alu 1 294 -18 442 213 147 67 chr10 95377545 95377702 -44939063 + L1MEd LINE L1 691 834 -5285 1928 138 58 9 chr10 95377702 95378027 -44938738 + MER61A LTR ERV1 1 341 -2 442 213 147 67 chr10 95378027 95378230 -44938535 + L1MEd LINE L1 834 1080 -5039 304 158 0 0 chr10 95378293 95378350 -44938415 - MER92C LTR ERV1 -2 552 496 537 274 22 11 chr10 95378424 95378603 -44938162 - MER92C LTR ERV1 -373 181 1 336 363 50 12 chr10 95378603 95378763 -44938002 + HAL1 LINE L1 1231 1396 -1111 417 246 87 16 chr10 95379591 95379717 -44937048 - L2 LINE L2 -4 3268 3134 5195 119 17 3 chr10 95380782 95381554 -44935211 + LTR39 LTR ERV1 1 783 0 1847 143 60 30 chr10 95382020 95382384 -44934381 - THE1C LTR MaLR 0 375 1 488 353 6 6 chr10 95382898 95383071 -44933694 - MIR SINE MIR -82 180 8 2083 148 9 32 chr10 95383354 95383699 -44933066 - MER1B DNA MER1_type 0 337 1 524 250 69 25 chr10 95384109 95384313 -44932452 + LTR7 LTR ERV1 238 450 0 332 128 105 12 chr10 95384692 95384778 -44931987 + L1MD3 LINE L1 6480 6573 -1422 2015 250 72 16 chr10 95384786 95385519 -44931246 + L1MC4 LINE L1 7269 8042 0 322 109 156 0 chr10 95385583 95385647 -44931118 - MLT1D LTR MaLR -5 500 427 471 204 175 0 chr10 95385647 95385784 -44930981 - MLT1D LTR MaLR -181 324 164 1284 188 85 38 chr10 95385799 95385821 -44930944 - MLT1B LTR MaLR -34 356 336 2281 129 3 12 chr10 95385821 95386161 -44930604 + MER1B DNA MER1_type 1 337 0 1284 188 85 38 chr10 95386161 95386478 -44930287 - MLT1B LTR MaLR -54 336 1 349 284 83 75 chr10 95387109 95387458 -44929307 + MLT1K LTR MaLR 229 580 -8 1065 215 136 15 chr10 95387995 95388334 -44928431 - MLT1F1 LTR MaLR 0 567 188 201 94 0 0 chr10 95388334 95388366 -44928399 + (GA)n Simple_repeat Simple_repeat 2 33 0 970 179 24 33 chr10 95388388 95388600 -44928165 + MER20 DNA MER1_type 10 219 0 456 288 113 0 chr10 95388624 95388784 -44927981 - MIR SINE MIR -51 211 34 2171 138 0 0 chr10 95389460 95389771 -44926994 - AluSx SINE Alu -1 311 1 252 0 0 0 chr10 95389842 95389870 -44926895 + (A)n Simple_repeat Simple_repeat 1 28 0 462 269 78 61 chr10 95390641 95390698 -44926067 + MER112 DNA MER1_type 5 60 -200 360 0 0 0 chr10 95390698 95390738 -44926027 + (CA)n Simple_repeat Simple_repeat 2 41 0 462 269 78 61 chr10 95390738 95390925 -44925840 + MER112 DNA MER1_type 60 253 -7 420 188 58 99 chr10 95391678 95391970 -44924795 - L1MC5 LINE L1 -193 7768 7489 2561 84 35 24 chr10 95392565 95392936 -44923829 + THE1C LTR MaLR 1 375 0 340 275 0 11 chr10 95393000 95393091 -44923674 + L1MC4 LINE L1 6614 6703 -1339 338 286 37 32 chr10 95393047 95393152 -44923613 - L1MC4 LINE L1 -1339 6703 6600 * 2208 134 0 0 chr10 95393152 95393444 -44923321 - AluSx SINE Alu -20 292 1 338 286 37 32 chr10 95393444 95393554 -44923211 - L1MC4 LINE L1 -1442 6600 1581 414 233 19 31 chr10 95393633 95393649 -44923116 - L1MA10 LINE L1 -2 6332 6317 3188 184 69 37 chr10 95393649 95394573 -44922192 - L1ME2 LINE L1 -9 6155 5209 793 274 76 13 chr10 95394579 95394988 -44921777 - L1ME LINE L1 -4416 1980 1441 352 203 69 66 chr10 95395187 95395208 -44921557 - L1ME LINE L1 -5344 825 806 396 0 0 0 chr10 95395208 95395252 -44921513 + (TA)n Simple_repeat Simple_repeat 2 45 0 352 203 69 66 chr10 95395252 95395489 -44921276 - L1ME LINE L1 -5363 806 585 825 315 41 12 chr10 95395782 95396201 -44920564 - L1ME LINE L1 -5929 467 37 1968 138 0 24 chr10 95396231 95396522 -44920243 + AluSx SINE Alu 1 284 -28 297 309 60 47 chr10 95396966 95397115 -44919650 - MIR SINE MIR -67 195 45 1046 251 40 8 chr10 95397383 95397630 -44919135 - MIR SINE MIR 0 262 8 235 283 51 21 chr10 95397645 95397766 -44918999 - MIR3 SINE MIR -47 161 72 474 260 8 16 chr10 95397967 95398090 -44918675 - L2 LINE L2 -5 3308 3187 1140 293 69 12 chr10 95399408 95399828 -44916937 + LTR16A LTR ERVL 7 450 0 198 209 0 0 chr10 95400122 95400165 -44916600 + (CAT)n Simple_repeat Simple_repeat 3 45 0 13779 64 1 0 chr10 95400982 95402861 -44913904 - L1PA5 LINE L1 -3038 3108 1228 18249 46 11 3 chr10 95402861 95405908 -44910857 + L1PA5 LINE L1 3101 6151 -3 224 59 29 0 chr10 95405911 95405945 -44910820 + (TAA)n Simple_repeat Simple_repeat 3 37 0 180 0 0 0 chr10 95407685 95407705 -44909060 + (A)n Simple_repeat Simple_repeat 1 20 0 582 330 14 5 chr10 95409046 95409267 -44907498 - L2 LINE L2 -571 2743 2521 5666 38 4 0 chr10 95409727 95410459 -44906306 - L1PA13 LINE L1 -2234 3912 3178 8394 137 8 1 chr10 95410459 95412700 -44904065 + L1PA13 LINE L1 3915 6148 -15 23 33 0 0 chr10 95412700 95412730 -44904035 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 32 25 chr10 95412973 95413116 -44903649 + MER5B DNA MER1_type 10 163 -26 350 61 0 0 chr10 95413183 95413232 -44903533 - MADE1 DNA Mariner 0 80 32 371 213 72 68 chr10 95413291 95413368 -44903397 - HAL1 LINE L1 -3 2504 2429 1999 167 3 0 chr10 95413368 95413679 -44903086 + AluJb SINE Alu 1 312 0 371 213 72 68 chr10 95413679 95413822 -44902943 - HAL1 LINE L1 -78 2429 2283 28137 52 2 2 chr10 95414005 95417698 -44899067 + L1P LINE L1 11 3700 -2446 252 0 0 0 chr10 95417698 95417726 -44899039 + (CCCCCT)n Simple_repeat Simple_repeat 6 33 0 4911 84 53 56 chr10 95417730 95418564 -44898201 + SVA Other Other 38 868 -518 28 0 0 0 chr10 95420352 95420380 -44896385 + AT_rich Low_complexity Low_complexity 1 28 0 2250 100 3 0 chr10 95424822 95425112 -44891653 + AluSx SINE Alu 1 291 -21 29 0 0 0 chr10 95425888 95425917 -44890848 + AT_rich Low_complexity Low_complexity 1 29 0 374 233 116 20 chr10 95427518 95427664 -44889101 - MLT1J2 LTR MaLR -290 160 1 183 290 58 29 chr10 95430290 95430359 -44886406 + L2 LINE L2 3141 3211 -61 1872 142 21 0 chr10 95430574 95430855 -44885910 - AluSx SINE Alu -25 287 1 1795 219 95 11 chr10 95431093 95431568 -44885197 + MLT1E2 LTR MaLR 112 626 0 520 274 16 0 chr10 95431778 95431902 -44884863 + L2 LINE L2 3170 3295 -18 257 206 27 82 chr10 95432112 95432185 -44884580 - MIR3 SINE MIR -39 169 101 205 300 45 120 chr10 95432388 95432655 -44884110 - L2 LINE L2 -5 3267 3021 2191 106 13 3 chr10 95432744 95433045 -44883720 + AluSx SINE Alu 1 304 -8 283 303 147 9 chr10 95433642 95433751 -44883014 - L2 LINE L2 -6 3266 3143 300 356 82 67 chr10 95433813 95434083 -44882682 - L2 LINE L2 -6 3266 2993 5189 207 32 32 chr10 95434090 95435553 -44881212 + L1P LINE L1 2221 3683 -2463 653 273 69 13 chr10 95435836 95436046 -44880719 + MIR SINE MIR 3 221 -32 1252 228 47 0 chr10 95437198 95437474 -44879291 + Tigger7 DNA MER2_type 10 298 -2189 * 2087 115 19 40 chr10 95437471 95437846 -44878919 + Tigger7 DNA MER2_type 2221 2587 0 742 221 17 6 chr10 95439214 95439395 -44877370 - LTR41 LTR ERVL -586 187 5 186 43 0 0 chr10 95439978 95440001 -44876764 + (TTC)n Simple_repeat Simple_repeat 2 24 0 693 179 16 53 chr10 95440520 95440710 -44876055 - MER20 DNA MER1_type -7 212 30 268 328 43 16 chr10 95442553 95442689 -44874076 + MER5B DNA MER1_type 20 173 -16 753 160 0 8 chr10 95442909 95443034 -44873731 - FLAM_C SINE Alu -19 124 1 2013 181 55 5 chr10 95443444 95443848 -44872917 + MSTA LTR MaLR 5 428 0 703 244 51 108 chr10 95444546 95445000 -44871765 + Charlie7 DNA MER1_type 1 428 -2184 916 234 74 4 chr10 95445028 95445285 -44871480 + L1MC5 LINE L1 5318 5592 -2216 1539 196 50 138 chr10 95445290 95446145 -44870620 + L1MC5 LINE L1 6788 7567 -394 1506 221 57 19 chr10 95446145 95446512 -44870253 - MSTD LTR MaLR 0 396 16 689 208 86 57 chr10 95446565 95446844 -44869921 + L1MC5 LINE L1 7611 7897 -64 593 248 142 13 chr10 95446866 95447168 -44869597 + Charlie7 DNA MER1_type 397 737 -1875 1842 272 47 9 chr10 95447177 95447758 -44869007 + L1MEc LINE L1 37 639 -5757 1077 134 5 41 chr10 95447758 95447952 -44868813 - MER20 DNA MER1_type 0 219 33 2888 252 43 22 chr10 95447970 95448492 -44868273 + L1MEc LINE L1 638 1148 -5248 2043 126 4 0 chr10 95448492 95448789 -44867976 + AluSc SINE Alu 1 298 0 2888 252 43 22 chr10 95448789 95449459 -44867306 + L1MEc LINE L1 1148 1856 -4540 25 0 0 0 chr10 95449746 95449771 -44866994 + AT_rich Low_complexity Low_complexity 1 25 0 387 214 90 0 chr10 95450035 95450124 -44866641 - MIR3 SINE MIR -36 172 76 18428 42 0 2 chr10 95450191 95453244 -44863521 - L1PA4 LINE L1 -1 6154 3101 8309 74 2 2 chr10 95453244 95454415 -44862350 + L1P LINE L1 1228 2398 -3748 1674 265 145 25 chr10 95454723 95455439 -44861326 - L2 LINE L2 -1390 1924 1123 7819 111 14 45 chr10 95456013 95457525 -44859240 - HERVH LTR ERV1 -5913 1800 398 4936 194 40 40 chr10 95457681 95458508 -44858257 - L1 LINE L1 -1236 5870 5044 401 135 81 0 chr10 95458508 95458582 -44858183 + Tigger5 DNA MER2_type 2244 2323 0 4936 194 40 40 chr10 95458582 95459675 -44857090 - L1 LINE L1 -2062 5044 4051 11827 29 1 0 chr10 95459820 95461473 -44855292 - L1P1 LINE L1 -586 5569 3915 5669 42 5 0 chr10 95461463 95462204 -44854561 + L1P1 LINE L1 3168 3912 -2234 * 582 330 14 5 chr10 95462664 95462885 -44853880 + L2 LINE L2 2521 2743 -571 180 0 0 0 chr10 95464228 95464248 -44852517 + (T)n Simple_repeat Simple_repeat 1 20 0 2456 239 49 38 chr10 95464627 95465042 -44851723 - L1 LINE L1 -3622 3484 3075 1289 196 0 0 chr10 95465042 95465277 -44851488 + MER46A DNA MER2_type 1 235 -1 2456 239 49 38 chr10 95465277 95467497 -44849268 - L1 LINE L1 -4031 3075 3 326 288 25 0 chr10 95468385 95468465 -44848300 - MER5A DNA MER1_type 0 189 108 200 333 0 29 chr10 95469105 95469174 -44847591 - MER5A DNA MER1_type -85 104 38 * 285 175 16 32 chr10 95469115 95469178 -44847587 + MER5A DNA MER1_type 106 167 -22 678 119 0 45 chr10 95469965 95470099 -44846666 + AluSp SINE Alu 1 128 -185 4280 134 41 21 chr10 95471015 95471537 -44845228 + L1MA9 LINE L1 4948 5458 -854 2293 120 0 0 chr10 95471537 95471846 -44844919 + AluSc SINE Alu 1 309 0 4280 134 41 21 chr10 95471846 95472148 -44844617 + L1MA9 LINE L1 5458 5752 -560 414 0 0 0 chr10 95472148 95472194 -44844571 + (CA)n Simple_repeat Simple_repeat 1 46 0 4280 134 41 21 chr10 95472194 95472455 -44844310 + L1MA9 LINE L1 5752 6054 -258 1372 199 100 62 chr10 95472463 95472834 -44843931 - MSTD LTR MaLR -11 385 1 1595 100 44 0 chr10 95472835 95473086 -44843679 + L1MA9 LINE L1 6051 6312 0 197 250 107 0 chr10 95473246 95473302 -44843463 - L2 LINE L2 -7 3306 3245 327 236 74 108 chr10 95473653 95473801 -44842964 + MIR SINE MIR 118 260 -2 223 348 22 45 chr10 95473891 95473980 -44842785 - MIR SINE MIR -103 105 19 468 260 151 74 chr10 95474272 95474703 -44842062 - MLT1J LTR MaLR -18 493 30 941 190 25 5 chr10 95475414 95475614 -44841151 - MER3 DNA MER1_type -5 204 1 217 264 58 81 chr10 95475774 95475861 -44840904 - L2 LINE L2 -20 3252 3168 324 370 89 5 chr10 95476053 95476256 -44840509 - L2 LINE L2 -557 2757 2538 323 237 51 42 chr10 95476277 95476395 -44840370 + MARNA DNA Mariner 269 387 -199 2011 128 44 0 chr10 95476620 95476785 -44839980 - AluSq SINE Alu -3 310 125 468 0 0 0 chr10 95476785 95476837 -44839928 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2011 128 44 0 chr10 95476837 95476968 -44839797 - AluSq SINE Alu -188 125 1 21 36 0 0 chr10 95476971 95476999 -44839766 + AT_rich Low_complexity Low_complexity 1 28 0 316 326 140 69 chr10 95479790 95480603 -44836162 + L1M2 LINE L1 582 1452 -5397 216 269 28 28 chr10 95480608 95480749 -44836016 + (CACCC)n Simple_repeat Simple_repeat 4 144 0 189 0 0 0 chr10 95481133 95481154 -44835611 + (CCTG)n Simple_repeat Simple_repeat 2 22 0 745 256 101 29 chr10 95482250 95482527 -44834238 - MER46C DNA MER2_type -41 297 1 914 91 0 0 chr10 95482644 95482765 -44834000 - AluSc SINE Alu -12 297 177 26 30 0 0 chr10 95482805 95482838 -44833927 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr10 95482857 95482884 -44833881 + (TG)n Simple_repeat Simple_repeat 2 28 0 29 47 0 0 chr10 95483321 95483364 -44833401 + AT_rich Low_complexity Low_complexity 1 43 0 250 296 25 0 chr10 95483552 95483633 -44833132 + MER5B DNA MER1_type 1 83 -95 534 267 34 27 chr10 95483636 95483782 -44832983 + MER5B DNA MER1_type 6 152 -26 228 291 36 0 chr10 95483795 95483850 -44832915 + MER5A DNA MER1_type 83 139 -50 265 326 109 71 chr10 95484611 95485050 -44831715 - L2 LINE L2 -8 3264 2809 342 0 0 0 chr10 95485382 95485420 -44831345 + (TG)n Simple_repeat Simple_repeat 2 39 0 423 254 78 62 chr10 95485601 95485794 -44830971 - MIR SINE MIR 0 262 67 312 258 68 45 chr10 95486408 95486540 -44830225 + MIR SINE MIR 126 260 -2 264 283 0 17 chr10 95486541 95486601 -44830164 + Tigger3(Golem) DNA MER2_type 2 60 -2969 1459 153 44 8 chr10 95486604 95486853 -44829912 + Tigger3(Golem) DNA MER2_type 2781 3038 0 5764 28 9 0 chr10 95487647 95488332 -44828433 - L1PA4 LINE L1 0 6155 5465 2130 121 3 16 chr10 95490580 95490894 -44825871 + AluSg SINE Alu 1 310 0 257 363 110 10 chr10 95491322 95491631 -44825134 + L2 LINE L2 1753 2092 -1222 1542 100 45 0 chr10 95491676 95491896 -44824869 + MER30 DNA MER1_type 1 230 0 477 314 62 43 chr10 95492293 95492551 -44824214 + L2 LINE L2 2632 2894 -420 208 283 186 18 chr10 95493347 95493460 -44823305 + MIR SINE MIR 130 261 -1 402 263 224 24 chr10 95493470 95493675 -44823090 + MIR SINE MIR 5 250 -12 212 261 160 34 chr10 95493870 95493989 -44822776 + MIR3 SINE MIR 71 204 -4 580 299 45 66 chr10 95494242 95494577 -44822188 - MLT1I LTR MaLR -9 400 73 23 0 0 0 chr10 95495166 95495189 -44821576 + AT_rich Low_complexity Low_complexity 1 23 0 395 292 42 0 chr10 95495228 95495348 -44821417 - MIR SINE MIR 0 262 138 30 18 0 54 chr10 95495693 95495749 -44821016 + AT_rich Low_complexity Low_complexity 1 53 0 33 43 0 0 chr10 95495927 95495974 -44820791 + AT_rich Low_complexity Low_complexity 1 47 0 379 244 137 20 chr10 95496205 95496402 -44820363 + L1ME4a LINE L1 5709 5928 -193 240 122 0 0 chr10 95496838 95496879 -44819886 + (CA)n Simple_repeat Simple_repeat 1 41 0 34976 34 1 5 chr10 95497132 95502212 -44814553 - L1PA3 LINE L1 -1 6154 1099 195 337 84 11 chr10 95502324 95502419 -44814346 + L3 LINE CR1 1441 1542 -35 970 230 63 66 chr10 95503626 95504021 -44812744 - L1MC4a LINE L1 -1815 5993 5600 282 369 6 48 chr10 95504678 95504846 -44811919 + MIR3 SINE MIR 39 199 -9 584 294 104 9 chr10 95505013 95505234 -44811531 + MIR SINE MIR 11 252 -10 23 33 0 0 chr10 95505367 95505397 -44811368 + AT_rich Low_complexity Low_complexity 1 30 0 3105 201 81 4 chr10 95505878 95506847 -44809918 + L1MD1 LINE L1 4920 5963 -279 1956 179 3 21 chr10 95506921 95507257 -44809508 + MER7A DNA MER2_type 18 345 -1 22 0 0 0 chr10 95508718 95508740 -44808025 + AT_rich Low_complexity Low_complexity 1 22 0 2026 141 0 3 chr10 95508765 95509062 -44807703 - AluSx SINE Alu -16 296 1 22 35 0 0 chr10 95509546 95509575 -44807190 + AT_rich Low_complexity Low_complexity 1 29 0 699 159 159 0 chr10 95509702 95509834 -44806931 - MER5A DNA MER1_type 0 189 37 562 255 125 0 chr10 95509997 95510205 -44806560 - L1M4 LINE L1 -1542 4604 4371 509 274 48 32 chr10 95510229 95510258 -44806507 - L1M4 LINE L1 -1825 4321 4294 2552 130 43 14 chr10 95510258 95510680 -44806085 - Tigger2a DNA MER2_type 0 434 1 509 274 48 32 chr10 95510680 95510902 -44805863 - L1M4 LINE L1 -1852 4294 4066 773 256 24 24 chr10 95510942 95511153 -44805612 + L1ME LINE L1 5436 5646 -516 614 178 0 0 chr10 95511681 95511788 -44804977 - FLAM_C SINE Alu -36 107 1 1437 237 153 22 chr10 95512099 95512563 -44804202 + L1MC4a LINE L1 6364 6803 -1005 * 3868 231 41 13 chr10 95512560 95513649 -44803116 - L1M4 LINE L1 -2094 4052 2933 1537 157 68 3 chr10 95513646 95513940 -44802825 + L1MC2 LINE L1 5589 5901 -443 * 7790 207 70 66 chr10 95513971 95515790 -44800975 + L1P4 LINE L1 1 1812 -4985 1025 172 15 54 chr10 95515790 95515993 -44800772 + AluJo SINE Alu 107 301 -11 7790 207 70 66 chr10 95515993 95517743 -44799022 + L1P4 LINE L1 1812 3806 -2991 9103 196 24 5 chr10 95517749 95518009 -44798756 + L1P4 LINE L1 4073 4327 -2489 366 61 0 0 chr10 95518009 95518058 -44798707 + (CA)n Simple_repeat Simple_repeat 2 50 0 9103 196 24 5 chr10 95518058 95519816 -44796949 + L1P4 LINE L1 4327 6124 -692 476 276 91 45 chr10 95519893 95520505 -44796260 + L1MEd LINE L1 1371 2059 -4662 2339 151 47 26 chr10 95520557 95520982 -44795783 + Tigger2a DNA MER2_type 1 434 0 333 282 0 92 chr10 95521174 95521369 -44795396 + L1MEd LINE L1 2399 2575 -3965 592 308 142 47 chr10 95521645 95522475 -44794290 - L2 LINE L2 -24 3289 2365 617 278 153 14 chr10 95522475 95522698 -44794067 - L2 LINE L2 -1329 1985 1732 779 236 300 32 chr10 95522734 95523107 -44793658 - LTR33 LTR ERVL -3 518 46 572 261 0 20 chr10 95523140 95523293 -44793472 - L2 LINE L2 -1640 1674 1525 372 173 0 27 chr10 95523328 95523403 -44793362 - SST1 Satellite centromeric -1490 73 1 2493 56 3 0 chr10 95523934 95524236 -44792529 + AluYb8 SINE Alu 1 303 -15 808 296 40 13 chr10 95524269 95524570 -44792195 - L2 LINE L2 -1923 1391 1083 317 346 63 0 chr10 95524996 95525123 -44791642 + MER91C DNA MER1_type 6 140 0 42 57 0 0 chr10 95525717 95525787 -44790978 + AT_rich Low_complexity Low_complexity 1 70 0 24 0 0 0 chr10 95525870 95525894 -44790871 + AT_rich Low_complexity Low_complexity 1 24 0 254 216 0 14 chr10 95525894 95525968 -44790797 - L1ME4a LINE L1 -3 6118 6046 1225 109 6 11 chr10 95525971 95526145 -44790620 + AluSg/x SINE Alu 84 256 -54 357 279 176 0 chr10 95526478 95526682 -44790083 - L1ME4a LINE L1 -286 5835 5596 304 267 128 43 chr10 95526758 95526945 -44789820 - L1ME4a LINE L1 -674 5492 5290 234 227 0 0 chr10 95527362 95527406 -44789359 - L1MC4 LINE L1 -368 7674 7631 199 273 62 62 chr10 95529393 95529521 -44787244 - MIR SINE MIR -115 147 20 25 31 0 0 chr10 95529870 95529902 -44786863 + AT_rich Low_complexity Low_complexity 1 32 0 3035 188 48 13 chr10 95530366 95530994 -44785771 + MER82 DNA MER2_type 1 650 -3 784 271 79 5 chr10 95532320 95532523 -44784242 - MER58A DNA MER1_type 0 224 7 22 0 0 0 chr10 95532659 95532681 -44784084 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 95534558 95534584 -44782181 + AT_rich Low_complexity Low_complexity 1 26 0 286 300 150 0 chr10 95536825 95536965 -44779800 - L1ME4a LINE L1 -84 6037 5877 25 0 0 0 chr10 95537750 95537775 -44778990 + AT_rich Low_complexity Low_complexity 1 25 0 471 216 34 2 chr10 95538559 95538672 -44778093 + MIR SINE MIR 53 169 -39 36 100 0 0 chr10 95538800 95538920 -44777845 + AT_rich Low_complexity Low_complexity 1 120 0 2027 115 0 51 chr10 95538931 95539245 -44777520 - AluSx SINE Alu -14 298 1 1099 122 12 24 chr10 95539253 95539417 -44777348 - AluSg/x SINE Alu -7 305 144 1409 71 0 95 chr10 95539784 95539994 -44776771 - AluSg SINE Alu -120 190 1 21 0 0 0 chr10 95541596 95541617 -44775148 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr10 95543372 95543405 -44773360 + AT_rich Low_complexity Low_complexity 1 33 0 27 87 0 0 chr10 95544967 95545036 -44771729 + AT_rich Low_complexity Low_complexity 1 69 0 23 0 0 0 chr10 95545110 95545133 -44771632 + AT_rich Low_complexity Low_complexity 1 23 0 1251 59 5 27 chr10 95545463 95545650 -44771115 + L1PA15 LINE L1 5308 5490 -675 40922 33 22 1 chr10 95545650 95551674 -44765091 + L1PA2 LINE L1 1 6155 0 3092 111 85 14 chr10 95551681 95552197 -44764568 + L1PA15 LINE L1 5476 6028 -137 29028 105 12 16 chr10 95552299 95557816 -44758949 - L1PA7 LINE L1 -76 6078 589 296 160 20 0 chr10 95557842 95557892 -44758873 - MER5A DNA MER1_type -114 75 25 26 0 0 0 chr10 95559560 95559586 -44757179 + AT_rich Low_complexity Low_complexity 1 26 0 3045 118 7 0 chr10 95559725 95560176 -44756589 + L1P3 LINE L1 2 455 -6006 * 4177 90 18 2 chr10 95560167 95560790 -44755975 + L1P3 LINE L1 959 1591 -4870 11084 35 0 3 chr10 95560891 95562923 -44753842 - L1PA5 LINE L1 -148 6006 3981 2605 255 75 18 chr10 95562917 95563959 -44752806 + L1M4 LINE L1 3022 4122 -2024 * 1672 271 40 26 chr10 95564004 95564721 -44752044 + L1M4 LINE L1 4036 4762 -1384 1305 146 17 21 chr10 95564899 95565132 -44751633 - MER1B DNA MER1_type -65 232 1 407 319 0 9 chr10 95565182 95565295 -44751470 - MIR SINE MIR -117 145 34 369 361 16 8 chr10 95565306 95565428 -44751337 + L2 LINE L2 3191 3313 0 688 195 185 44 chr10 95568596 95568801 -44747964 + MIR SINE MIR 15 248 -14 399 282 128 28 chr10 95569526 95569889 -44746876 - L1ME LINE L1 -479 5642 5258 492 200 109 79 chr10 95569906 95570071 -44746694 + MIR SINE MIR 35 204 -58 217 184 13 40 chr10 95570077 95570153 -44746612 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 234 234 47 0 chr10 95570179 95570243 -44746522 + MIR SINE MIR 196 262 0 397 301 84 30 chr10 95570573 95571440 -44745325 - L1MEd LINE L1 -4759 1551 495 506 321 134 23 chr10 95571469 95571768 -44744997 - L1MEd LINE L1 -5735 384 53 182 262 0 0 chr10 95571833 95571875 -44744890 - L2 LINE L2 -4 3309 3268 2464 81 0 3 chr10 95572115 95572423 -44744342 - AluY SINE Alu -4 307 1 248 279 0 0 chr10 95573784 95573845 -44742920 + (TG)n Simple_repeat Simple_repeat 2 62 0 520 300 103 27 chr10 95573963 95574186 -44742579 - MIR SINE MIR -10 252 13 297 301 54 0 chr10 95574277 95574370 -44742395 + MIR SINE MIR 31 128 -80 545 263 114 43 chr10 95574511 95574792 -44741973 + L1M4 LINE L1 2971 3271 -2875 6119 89 15 15 chr10 95575497 95575681 -44741084 + L1PA11 LINE L1 5254 5437 -737 2089 120 0 28 chr10 95575681 95575998 -44740767 + AluSx SINE Alu 3 310 -2 6119 89 15 15 chr10 95575998 95576732 -44740033 + L1PA11 LINE L1 5436 6172 -2 356 287 67 67 chr10 95576912 95577107 -44739658 + HAL1b LINE L1 453 647 -701 2329 115 0 6 chr10 95577251 95577565 -44739200 - AluSx SINE Alu 0 312 1 308 287 20 30 chr10 95577573 95577674 -44739091 + MIR SINE MIR 30 129 -133 356 219 44 31 chr10 95577674 95577834 -44738931 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 458 244 98 18 chr10 95578252 95578416 -44738349 - MLT1J2 LTR MaLR -18 432 256 339 309 72 36 chr10 95578476 95578780 -44737985 - LTR16A LTR ERVL -76 374 60 373 170 53 11 chr10 95578811 95578905 -44737860 - MLT1J1 LTR MaLR -339 107 10 195 262 98 22 chr10 95579821 95579949 -44736816 + MIR SINE MIR 65 204 -4 2191 166 103 13 chr10 95580191 95580648 -44736117 - MLT1D LTR MaLR -7 498 1 251 306 52 6 chr10 95580968 95581141 -44735624 + L1ME4a LINE L1 5844 6024 -97 245 261 103 21 chr10 95581557 95581708 -44735057 - MIR SINE MIR -29 179 1 204 40 0 0 chr10 95583434 95583459 -44733306 + (TTCCC)n Simple_repeat Simple_repeat 1 25 0 2367 94 0 0 chr10 95583696 95583993 -44732772 - AluSq SINE Alu -16 297 1 27522 66 10 4 chr10 95584470 95589067 -44727698 + L1PA7 LINE L1 1536 6154 0 639 219 16 0 chr10 95589068 95589191 -44727574 + MER5A DNA MER1_type 65 189 0 1760 185 62 21 chr10 95589520 95589941 -44726824 + L1MDa LINE L1 1328 1765 -4775 2078 151 32 0 chr10 95589948 95590260 -44726505 + MSTC LTR MaLR 1 322 -106 3357 195 100 23 chr10 95590270 95590685 -44726080 + L1MDa LINE L1 1783 2165 -4375 1664 209 3 0 chr10 95590685 95590982 -44725783 + AluJo SINE Alu 1 298 -14 3357 195 100 23 chr10 95590982 95592113 -44724652 + L1MDa LINE L1 2165 3435 -3105 894 52 17 0 chr10 95592115 95592230 -44724535 - L1PA5 LINE L1 -1 6153 6037 204 40 0 0 chr10 95594044 95594069 -44722696 + (TTCCC)n Simple_repeat Simple_repeat 1 25 0 2389 94 0 0 chr10 95594306 95594603 -44722162 - AluSq SINE Alu -16 297 1 31920 37 3 0 chr10 95595080 95599681 -44717084 + L1PA5 LINE L1 1536 6145 -9 23 0 0 0 chr10 95599681 95599704 -44717061 + AT_rich Low_complexity Low_complexity 1 23 0 461 180 54 5 chr10 95599747 95599805 -44716960 - L1P4 LINE L1 -612 5553 5499 1145 122 0 11 chr10 95599805 95599993 -44716772 - L1MA6 LINE L1 0 6300 6115 461 180 54 5 chr10 95599993 95600081 -44716684 - L1P4 LINE L1 -666 5499 5389 29 0 0 0 chr10 95600081 95600110 -44716655 + AT_rich Low_complexity Low_complexity 1 29 0 291 282 109 19 chr10 95600989 95601145 -44715620 + MIR SINE MIR 2 171 -91 550 299 18 0 chr10 95601302 95601466 -44715299 + MIR SINE MIR 88 254 -8 592 261 24 18 chr10 95602117 95602282 -44714483 - MIR3 SINE MIR -35 173 8 1342 225 50 24 chr10 95602329 95602783 -44713982 - L1ME3A LINE L1 -96 6074 5565 404 196 38 63 chr10 95602810 95602968 -44713797 - MIR3 SINE MIR -52 156 3 351 235 43 17 chr10 95603713 95603828 -44712937 + MER103 DNA DNA 36 153 -13 2430 122 8 19 chr10 95603849 95604217 -44712548 - THE1B LTR MaLR 0 364 1 1978 196 38 94 chr10 95604512 95605171 -44711594 + MLT1G LTR MaLR 2 590 0 388 304 46 46 chr10 95605889 95605925 -44710840 - L2 LINE L2 -529 2785 2750 2043 122 24 0 chr10 95605925 95606213 -44710552 - AluSx SINE Alu -17 295 1 388 304 46 46 chr10 95606213 95606413 -44710352 - L2 LINE L2 -563 2751 2549 1620 141 6 86 chr10 95606739 95607066 -44709699 + AluJo SINE Alu 1 301 -11 360 64 0 0 chr10 95607202 95607249 -44709516 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 473 299 99 28 chr10 95607249 95607603 -44709162 + HAL1b LINE L1 477 855 -493 2004 134 28 7 chr10 95607924 95608215 -44708550 + AluSg SINE Alu 1 297 -13 228 217 67 0 chr10 95608259 95608319 -44708446 + L1MC5 LINE L1 7161 7224 -737 435 244 155 25 chr10 95608394 95608710 -44708055 + L1MC5 LINE L1 7235 7591 -370 310 227 47 47 chr10 95609072 95609200 -44707565 + L1MC5 LINE L1 7609 7736 -225 408 330 41 10 chr10 95609398 95609592 -44707173 - MIR SINE MIR -44 218 19 24 32 0 0 chr10 95610655 95610686 -44706079 + AT_rich Low_complexity Low_complexity 1 31 0 2181 110 3 32 chr10 95610696 95611005 -44705760 + AluSx SINE Alu 1 300 -12 1624 210 40 100 chr10 95611018 95611599 -44705166 - L1MC4 LINE L1 -31 8011 7466 484 260 145 25 chr10 95611599 95611799 -44704966 + MLT1K LTR MaLR 332 555 -33 1169 107 173 5 chr10 95612200 95612397 -44704368 - MER30 DNA MER1_type 0 230 1 1956 196 2 30 chr10 95612662 95613060 -44703705 - MLT1B LTR MaLR -3 387 1 355 303 104 61 chr10 95613107 95613338 -44703427 - MLT1L LTR MaLR -38 577 337 311 256 0 13 chr10 95613331 95613409 -44703356 - MLT1J LTR MaLR -325 186 110 * 1915 146 7 3 chr10 95613441 95613736 -44703029 + AluSx SINE Alu 1 296 -16 3322 170 9 12 chr10 95613746 95614310 -44702455 + MER68 LTR ERV1 1 562 0 1950 139 3 35 chr10 95614830 95615147 -44701618 - AluSx SINE Alu -5 307 1 212 250 0 11 chr10 95616327 95616419 -44700346 + CT-rich Low_complexity Low_complexity 6 96 0 2211 121 0 3 chr10 95617136 95617434 -44699331 - AluSg SINE Alu -13 297 1 2363 104 9 15 chr10 95618025 95618361 -44698404 - MER1B DNA MER1_type 0 337 4 340 253 40 0 chr10 95619021 95619120 -44697645 + MIR SINE MIR 43 145 -63 22 35 0 0 chr10 95619462 95619491 -44697274 + AT_rich Low_complexity Low_complexity 1 29 0 273 294 15 0 chr10 95619580 95619648 -44697117 + L2 LINE L2 3230 3298 -15 751 197 178 0 chr10 95619830 95619982 -44696783 - MER20 DNA MER1_type -18 201 23 185 294 0 0 chr10 95620218 95620269 -44696496 - L2 LINE L2 -5 3308 3258 214 179 26 0 chr10 95620461 95620500 -44696265 + GA-rich Low_complexity Low_complexity 3 42 0 216 0 0 0 chr10 95621706 95621730 -44695035 + (A)n Simple_repeat Simple_repeat 1 24 0 190 233 0 50 chr10 95621948 95622008 -44694757 - MIR3 SINE MIR -1 207 151 255 235 49 49 chr10 95622407 95622509 -44694256 - MLT1L LTR MaLR -9 606 505 381 274 89 7 chr10 95622624 95622759 -44694006 - MLT1L LTR MaLR -297 318 173 262 200 154 0 chr10 95622797 95622862 -44693903 - MLT1L LTR MaLR -532 83 9 1865 195 11 77 chr10 95622900 95623352 -44693413 + MLT2B1 LTR ERVL 1 422 -98 620 242 69 0 chr10 95623667 95623862 -44692903 + MIR SINE MIR 56 262 0 237 389 56 0 chr10 95623921 95624065 -44692700 + L2 LINE L2 3118 3269 -3 237 217 100 17 chr10 95624241 95624301 -44692464 - L2 LINE L2 -4 3309 3245 2652 100 5 18 chr10 95624525 95624905 -44691860 - THE1C LTR MaLR 0 375 1 10408 90 46 40 chr10 95624905 95626475 -44690290 - THE1C-int LTR MaLR 0 1580 1 2476 118 21 16 chr10 95626475 95626848 -44689917 - THE1C LTR MaLR 0 375 1 304 262 117 0 chr10 95627965 95628068 -44688697 - L2 LINE L2 -1 3312 3198 1690 173 3 7 chr10 95628364 95628653 -44688112 + AluJo SINE Alu 1 288 -24 284 344 112 1 chr10 95630051 95630244 -44686521 - MIR SINE MIR -15 247 33 811 148 0 0 chr10 95630483 95630646 -44686119 - FLAM_A SINE Alu 0 163 1 738 266 37 21 chr10 95630843 95631084 -44685681 + MIR SINE MIR 18 262 0 497 181 181 16 chr10 95631090 95631217 -44685548 + L2 LINE L2 3162 3309 -4 368 293 115 6 chr10 95631245 95631419 -44685346 - MIR SINE MIR -66 196 4 306 261 11 23 chr10 95631828 95631916 -44684849 + L2 LINE L2 3185 3271 -1 305 353 33 0 chr10 95631925 95632047 -44684718 + MIR3 SINE MIR 37 162 -46 1676 202 19 39 chr10 95632527 95632889 -44683876 - MLT2B1 LTR ERVL -8 512 158 1878 147 65 12 chr10 95632913 95633440 -44683325 - MER51A LTR ERV1 -9 625 1 828 178 12 31 chr10 95633440 95633603 -44683162 - MLT2B1 LTR ERVL -360 160 1 301 312 150 29 chr10 95633644 95633815 -44682950 - MIR3 SINE MIR -5 203 12 398 273 38 30 chr10 95633815 95633947 -44682818 - MER5B DNA MER1_type 0 178 46 1873 140 82 18 chr10 95633964 95634091 -44682674 + MLT1A1 LTR MaLR 1 118 -247 2618 118 67 0 chr10 95634091 95634496 -44682269 + MSTB1 LTR MaLR 1 432 0 1873 140 82 18 chr10 95634496 95634711 -44682054 + MLT1A1 LTR MaLR 118 365 0 2366 234 124 13 chr10 95634711 95635389 -44681376 - L1ME3A LINE L1 -17 6153 5401 2824 16 0 0 chr10 95636490 95636794 -44679971 - AluYb8 SINE Alu -14 304 1 1765 122 25 0 chr10 95636906 95637331 -44679434 + AluSx SINE Alu 33 463 0 629 285 53 32 chr10 95637395 95637641 -44679124 - MLT1I LTR MaLR 0 409 159 779 209 7 0 chr10 95638278 95638426 -44678339 - AluSg/x SINE Alu -19 291 143 1805 148 35 7 chr10 95638679 95638963 -44677802 - AluSx SINE Alu -20 292 1 1621 111 5 0 chr10 95639643 95639859 -44676906 - AluSc SINE Alu -82 227 11 827 87 0 0 chr10 95639859 95639962 -44676803 + AluSg/x SINE Alu 187 289 -21 443 231 8 0 chr10 95640551 95640685 -44676080 + (TAG)n Simple_repeat Simple_repeat 1 135 0 402 235 150 8 chr10 95640705 95640833 -44675932 - MIR SINE MIR -53 209 60 216 314 118 0 chr10 95641581 95641683 -44675082 - L2 LINE L2 -1 3271 3158 655 268 162 56 chr10 95641698 95642199 -44674566 - MLT1L LTR MaLR 0 615 62 379 262 0 19 chr10 95642700 95642807 -44673958 + L1MC4a LINE L1 5736 5840 -1968 2265 188 142 10 chr10 95642867 95643366 -44673399 + MLT1F1 LTR MaLR 1 565 -2 489 263 181 6 chr10 95643402 95643573 -44673192 - MIR SINE MIR -21 241 41 228 111 0 0 chr10 95643596 95643632 -44673133 + (CTATA)n Simple_repeat Simple_repeat 2 37 0 222 37 0 0 chr10 95643638 95643665 -44673100 + (TG)n Simple_repeat Simple_repeat 2 28 0 761 140 0 0 chr10 95643708 95643815 -44672950 + AluSq/x SINE Alu 1 107 -205 2037 93 29 14 chr10 95643933 95644211 -44672554 - AluSq SINE Alu 0 313 32 380 267 83 0 chr10 95645193 95645313 -44671452 - MER117 DNA MER1_type -50 147 18 224 279 0 0 chr10 95645546 95645607 -44671158 + MIR SINE MIR 85 145 -63 478 251 114 66 chr10 95645710 95645870 -44670895 + MLT1J LTR MaLR 1 175 -336 2460 73 3 0 chr10 95645870 95646172 -44670593 + AluSx SINE Alu 1 303 -9 478 251 114 66 chr10 95646172 95646222 -44670543 + MLT1J LTR MaLR 175 221 -290 498 232 13 60 chr10 95646517 95646546 -44670219 + Charlie8 DNA MER1_type 93 122 -219 1949 173 0 0 chr10 95646546 95646847 -44669918 + AluJb SINE Alu 1 301 -11 498 232 13 60 chr10 95646847 95646968 -44669797 + Charlie8 DNA MER1_type 122 236 -105 2015 141 23 0 chr10 95646992 95647297 -44669468 - AluSq SINE Alu -1 312 1 437 294 88 12 chr10 95647596 95647766 -44668999 + MLT1J LTR MaLR 206 388 -123 180 111 0 0 chr10 95647844 95647871 -44668894 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1611 288 65 24 chr10 95648127 95648711 -44668054 - MLT1L LTR MaLR 0 615 8 428 266 0 0 chr10 95648716 95648810 -44667955 + MIR3 SINE MIR 81 174 -34 189 147 0 0 chr10 95649066 95649100 -44667665 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 219 209 77 66 chr10 95649666 95649757 -44667008 + MIR SINE MIR 60 151 -111 278 235 0 0 chr10 95649898 95649949 -44666816 - L2 LINE L2 -17 3296 3246 183 200 0 0 chr10 95649978 95650013 -44666752 - L2 LINE L2 -23 3290 3256 27 0 0 0 chr10 95650013 95650040 -44666725 + AT_rich Low_complexity Low_complexity 1 27 0 543 265 7 27 chr10 95650362 95650509 -44666256 + MIR SINE MIR 31 174 -88 186 240 80 27 chr10 95650853 95650928 -44665837 - MIR SINE MIR -25 237 159 210 296 12 12 chr10 95651372 95651453 -44665312 + MIR3 SINE MIR 98 178 -30 * 422 305 136 25 chr10 95651450 95651729 -44665036 - L2 LINE L2 -1 3312 3003 377 270 121 0 chr10 95652478 95652652 -44664113 - MIR SINE MIR -21 241 47 217 226 0 0 chr10 95653531 95653584 -44663181 + L2 LINE L2 3200 3252 -61 322 290 118 62 chr10 95653743 95654160 -44662605 + L2 LINE L2 2829 3268 -4 280 283 58 17 chr10 95654404 95654524 -44662241 + L2 LINE L2 2696 2820 -494 422 278 78 11 chr10 95655059 95655239 -44661526 - MIR SINE MIR -37 225 34 280 263 98 23 chr10 95655430 95655563 -44661202 - MIR SINE MIR -67 195 53 197 219 141 0 chr10 95657734 95657798 -44658967 + L2 LINE L2 3240 3312 -1 3512 157 34 57 chr10 95657843 95657973 -44658792 - L1MC2 LINE L1 -11 6333 6202 2057 125 4 0 chr10 95657973 95658273 -44658492 - AluSx SINE Alu 0 301 1 3512 157 34 57 chr10 95658273 95658901 -44657864 - L1MC2 LINE L1 -142 6202 5591 206 305 67 0 chr10 95659158 95659263 -44657502 - L2 LINE L2 -87 3226 3115 351 288 96 0 chr10 95660644 95660790 -44655975 - MIR SINE MIR 0 262 103 803 199 45 6 chr10 95660794 95660970 -44655795 + MER5A DNA MER1_type 3 185 -4 281 238 179 0 chr10 95660978 95661062 -44655703 - MIR SINE MIR -157 105 7 23 39 0 39 chr10 95661441 95661456 -44655309 + AT_rich Low_complexity Low_complexity 1 15 -35 1797 105 41 10 chr10 95661456 95661751 -44655014 + L1MA5A LINE L1 5992 6295 -2 23 39 0 39 chr10 95661751 95661787 -44654978 + AT_rich Low_complexity Low_complexity 15 50 0 1816 204 40 49 chr10 95661792 95662263 -44654502 - MLT1C LTR MaLR 0 467 1 336 290 101 2 chr10 95662378 95662515 -44654250 + MER5A DNA MER1_type 8 167 -22 253 286 91 39 chr10 95662396 95662550 -44654215 - MER5A DNA MER1_type -25 164 3 * 337 284 15 22 chr10 95663915 95664057 -44652708 - MIR SINE MIR -64 144 9 1873 190 121 17 chr10 95664744 95665159 -44651606 + MLT2C2 LTR ERVL 3 460 -4 537 209 189 7 chr10 95665403 95665551 -44651214 + MER5A DNA MER1_type 15 189 0 776 249 54 5 chr10 95665691 95665912 -44650853 - MIR SINE MIR 0 262 31 451 251 35 60 chr10 95666332 95666531 -44650234 + L2 LINE L2 3117 3310 -3 263 242 17 5 chr10 95668204 95668273 -44648492 + Charlie8 DNA MER1_type 1360 1418 -999 1635 176 65 9 chr10 95668352 95668757 -44648008 + LOR1a LTR ERV1 1 497 0 757 50 0 20 chr10 95669169 95669270 -44647495 - L1MA1 LINE L1 0 6302 6204 5737 20 0 0 chr10 95669270 95669905 -44646860 + L1PA3 LINE L1 5510 6152 -3 193 329 24 24 chr10 95670420 95670502 -44646263 + L2 LINE L2 2567 2648 -666 438 36 0 0 chr10 95671652 95671708 -44645057 + (TC)n Simple_repeat Simple_repeat 1 56 0 324 0 0 0 chr10 95671707 95671743 -44645022 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 4859 125 9 21 chr10 95672098 95672888 -44643877 - L1MA7 LINE L1 -1 6290 5511 279 273 16 41 chr10 95673230 95673351 -44643414 - L2 LINE L2 -40 3273 3156 920 206 65 9 chr10 95674444 95674658 -44642107 + MIR SINE MIR 31 256 -6 1351 153 15 0 chr10 95674719 95674922 -44641843 + AluJo SINE Alu 100 305 -7 2536 51 0 16 chr10 95674951 95675265 -44641500 - AluY SINE Alu -2 309 1 181 225 0 0 chr10 95675366 95675406 -44641359 + L2 LINE L2 3221 3260 -12 321 246 0 74 chr10 95675587 95675709 -44641056 - L2 LINE L2 -211 3102 2990 779 175 0 0 chr10 95677237 95677374 -44639391 + AluSc SINE Alu 15 151 -158 329 76 0 2 chr10 95677478 95677523 -44639242 - Alu SINE Alu -261 41 1 1511 87 0 0 chr10 95678393 95678588 -44638177 - L1PA13 LINE L1 -19 6144 5950 2272 116 0 0 chr10 95679070 95679372 -44637393 + AluSq SINE Alu 1 302 -11 324 362 41 0 chr10 95679653 95679820 -44636945 - MIR SINE MIR -64 144 18 255 316 132 18 chr10 95679880 95680108 -44636657 + L2 LINE L2 2466 2719 -595 447 322 29 86 chr10 95680252 95680566 -44636199 + L2 LINE L2 2939 3234 -38 238 284 100 106 chr10 95681287 95681607 -44635158 + L2 LINE L2 2945 3262 -10 30863 114 15 64 chr10 95681612 95687753 -44629012 + L1PA7 LINE L1 9 5834 -320 982 36 0 0 chr10 95687853 95687964 -44628801 - AluY SINE Alu -200 111 1 181 225 0 0 chr10 95688065 95688105 -44628660 + L2 LINE L2 3221 3260 -12 321 246 0 74 chr10 95688286 95688408 -44628357 - L2 LINE L2 -211 3102 2990 24 32 0 0 chr10 95689896 95689927 -44626838 + AT_rich Low_complexity Low_complexity 1 31 0 2041 100 0 4 chr10 95689934 95690203 -44626562 + AluSc SINE Alu 15 282 -27 307 59 119 0 chr10 95690203 95690321 -44626444 + (TA)n Simple_repeat Simple_repeat 1 132 0 25 65 0 0 chr10 95690456 95690502 -44626263 + AT_rich Low_complexity Low_complexity 1 46 0 1695 259 71 49 chr10 95690508 95692052 -44624713 - L1ME3A LINE L1 -219 5934 4367 267 145 58 0 chr10 95692105 95692174 -44624591 + (TA)n Simple_repeat Simple_repeat 1 73 0 1512 269 67 49 chr10 95692180 95692234 -44624531 - L1ME3A LINE L1 -1790 4339 4287 1837 217 70 49 chr10 95692234 95692765 -44624000 - MLT1F LTR MaLR 0 542 1 1512 269 67 49 chr10 95692765 95693724 -44623041 - L1ME3A LINE L1 -1842 4287 3308 500 277 63 118 chr10 95693831 95693938 -44622827 - L1ME3A LINE L1 -5443 676 565 1469 159 123 4 chr10 95693938 95694226 -44622539 - AluSx SINE Alu 0 318 1 500 277 63 118 chr10 95694226 95694369 -44622396 - L1ME3A LINE L1 -5554 565 416 8661 110 24 6 chr10 95694369 95695632 -44621133 - HSMAR1 DNA Mariner -2 1285 1 500 277 63 118 chr10 95695632 95696050 -44620715 - L1ME3A LINE L1 -5703 416 43 1626 183 0 43 chr10 95697263 95697564 -44619201 - AluJo SINE Alu -24 288 1 481 281 51 34 chr10 95697594 95698128 -44618637 + L1MEc LINE L1 789 1224 -4981 487 276 22 11 chr10 95698145 95698326 -44618439 + L1MEc LINE L1 1593 1775 -4621 24 32 0 0 chr10 95698410 95698441 -44618324 + AT_rich Low_complexity Low_complexity 1 31 0 386 262 89 4 chr10 95698516 95698741 -44618024 + L1MEc LINE L1 2023 2266 -4130 777 255 87 26 chr10 95698785 95699016 -44617749 + MIR SINE MIR 3 247 -15 2443 118 22 0 chr10 95699028 95699384 -44617381 + THE1B LTR MaLR 1 364 0 199 287 181 0 chr10 95699396 95699490 -44617275 - MIR SINE MIR -75 187 77 371 231 149 41 chr10 95699527 95699648 -44617117 + L2 LINE L2 3180 3313 0 693 326 14 5 chr10 95699817 95700035 -44616730 - MIR SINE MIR -11 251 32 606 277 70 84 chr10 95700308 95700614 -44616151 + MLT1L LTR MaLR 132 430 -185 2170 133 7 0 chr10 95700614 95700923 -44615842 + AluSx SINE Alu 1 311 -1 606 277 70 84 chr10 95700923 95701104 -44615661 + MLT1L LTR MaLR 430 612 -3 203 311 107 10 chr10 95701201 95701304 -44615461 + MIR SINE MIR 24 136 -72 231 42 0 62 chr10 95701318 95701366 -44615399 + (TTTTTA)n Simple_repeat Simple_repeat 4 48 0 369 0 0 0 chr10 95701366 95701407 -44615358 + (TG)n Simple_repeat Simple_repeat 2 42 0 659 229 28 34 chr10 95701491 95701670 -44615095 + MER5B DNA MER1_type 1 178 0 400 284 83 35 chr10 95702354 95702523 -44614242 + MIR3 SINE MIR 5 181 -27 579 262 117 68 chr10 95702603 95702927 -44613838 - MER102b DNA MER1_type -1 340 1 308 214 0 0 chr10 95706224 95706280 -44610485 + MIR3 SINE MIR 116 171 -37 370 172 0 23 chr10 95706357 95706444 -44610321 + CT-rich Low_complexity Low_complexity 4 88 0 395 288 42 8 chr10 95706444 95706562 -44610203 + MER5B DNA MER1_type 55 176 -2 278 286 0 42 chr10 95706459 95706578 -44610187 - MER5A DNA MER1_type -75 114 1 * 405 194 58 71 chr10 95706879 95707034 -44609731 + L1ME4a LINE L1 5924 6076 -45 189 132 0 0 chr10 95707504 95707542 -44609223 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 95708999 95709020 -44607745 + AT_rich Low_complexity Low_complexity 1 21 0 314 206 164 0 chr10 95709416 95709489 -44607276 + MIR SINE MIR 68 152 -110 608 244 170 39 chr10 95709650 95709801 -44606964 - MIR SINE MIR -3 259 67 2010 88 0 0 chr10 95709801 95710051 -44606714 + AluSx SINE Alu 56 305 -7 608 244 170 39 chr10 95710051 95710128 -44606637 - MIR SINE MIR -195 67 1 324 306 82 15 chr10 95710184 95710318 -44606447 - MIR3 SINE MIR -56 152 10 232 240 19 29 chr10 95710428 95710532 -44606233 + L1ME4a LINE L1 5992 6094 -27 28 0 0 0 chr10 95711518 95711546 -44605219 + AT_rich Low_complexity Low_complexity 1 28 0 759 226 152 5 chr10 95711695 95711899 -44604866 - MIR SINE MIR -10 252 19 2256 99 3 6 chr10 95712439 95712751 -44604014 + AluSx SINE Alu 1 311 -1 27 0 0 0 chr10 95712924 95712951 -44603814 + AT_rich Low_complexity Low_complexity 1 27 0 284 256 49 12 chr10 95713078 95713160 -44603605 - L2 LINE L2 0 3313 3229 1061 281 94 7 chr10 95713465 95713908 -44602857 + LTR33 LTR ERVL 13 521 0 515 302 12 87 chr10 95713914 95714042 -44602723 - L2 LINE L2 -488 2826 2725 656 106 10 0 chr10 95714042 95714146 -44602619 + L1PB4 LINE L1 6044 6148 -8 515 302 12 87 chr10 95714146 95714269 -44602496 - L2 LINE L2 -589 2725 2594 432 256 211 25 chr10 95714578 95714777 -44601988 - MIR SINE MIR -4 258 23 306 295 78 24 chr10 95714809 95714975 -44601790 - MIR SINE MIR -3 259 85 197 227 0 0 chr10 95714961 95715005 -44601760 + L2 LINE L2 3017 3060 -212 * 501 291 70 42 chr10 95715490 95715703 -44601062 + MIR SINE MIR 10 228 -34 677 321 149 16 chr10 95715740 95716176 -44600589 + L3 LINE CR1 1083 1576 -1 214 338 0 0 chr10 95716376 95716444 -44600321 - L3 LINE CR1 -1 1576 1509 573 219 69 131 chr10 95716542 95716848 -44599917 - MLT1A1 LTR MaLR -87 287 1 1266 231 27 66 chr10 95717003 95717309 -44599456 - L1MEc LINE L1 -3916 2480 2210 890 184 31 18 chr10 95717309 95717472 -44599293 - FRAM SINE Alu -1 165 1 1266 231 27 66 chr10 95717472 95717800 -44598965 - L1MEc LINE L1 -4186 2210 1871 * 2036 274 95 35 chr10 95717788 95718061 -44598704 - L1MEc LINE L1 -5282 1114 859 2544 60 0 0 chr10 95718061 95718361 -44598404 - AluY SINE Alu -11 300 1 2036 274 95 35 chr10 95718361 95718481 -44598284 - L1MEc LINE L1 -5537 859 748 2421 68 19 13 chr10 95718481 95718790 -44597975 + AluY SINE Alu 1 311 0 2036 274 95 35 chr10 95718790 95718891 -44597874 - L1MEc LINE L1 -5648 748 654 1807 181 0 23 chr10 95718891 95719200 -44597565 + AluJo SINE Alu 1 302 -10 2036 274 95 35 chr10 95719200 95719726 -44597039 - L1MEc LINE L1 -5742 654 31 369 287 92 4 chr10 95719735 95719995 -44596770 - L1MD2 LINE L1 -287 5883 5651 21 0 0 0 chr10 95719995 95720016 -44596749 + AT_rich Low_complexity Low_complexity 1 21 0 2619 197 16 109 chr10 95720212 95721375 -44595390 - L1ME1 LINE L1 -5 6161 4789 2184 100 21 3 chr10 95721375 95721666 -44595099 - AluSx SINE Alu -16 296 1 2619 197 16 109 chr10 95721666 95721759 -44595006 - L1ME1 LINE L1 -1377 4789 4689 553 240 66 8 chr10 95722196 95722317 -44594448 - MIR SINE MIR -123 139 12 321 241 230 0 chr10 95722385 95722472 -44594293 + L3 LINE CR1 448 554 -1023 216 301 116 14 chr10 95722540 95722686 -44594079 + L3 LINE CR1 651 811 -766 * 279 297 119 0 chr10 95722685 95722786 -44593979 + L2 LINE L2 3153 3265 -7 191 308 45 60 chr10 95722821 95722954 -44593811 + L3 LINE CR1 846 976 -601 1817 175 4 0 chr10 95723021 95723324 -44593441 - AluJb SINE Alu 0 305 2 7877 120 18 18 chr10 95723620 95723647 -44593118 - HSMAR2 DNA Mariner -1 1301 1275 659 169 119 0 chr10 95723647 95723765 -44593000 + FLAM_A SINE Alu 2 133 0 7877 120 18 18 chr10 95723765 95725038 -44591727 - HSMAR2 DNA Mariner -27 1275 2 252 300 0 0 chr10 95725046 95725116 -44591649 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 1124 154 163 3 chr10 95725293 95725613 -44591152 + L1MC2 LINE L1 5949 6335 -9 1132 278 82 52 chr10 95726047 95726434 -44590331 - L2 LINE L2 -2 3311 2828 3371 83 0 44 chr10 95726434 95726771 -44589994 - LTR46 LTR ERV1 0 460 149 2373 110 7 0 chr10 95726771 95727081 -44589684 - AluSq SINE Alu -1 312 1 3371 83 0 44 chr10 95727081 95727224 -44589541 - LTR46 LTR ERV1 -311 149 1 1132 278 82 52 chr10 95727224 95727461 -44589304 - L2 LINE L2 -485 2828 2599 2741 222 32 42 chr10 95727794 95728628 -44588137 + L1ME2 LINE L1 5280 6105 -59 579 168 0 9 chr10 95728647 95728754 -44588011 + FLAM_A SINE Alu 25 130 -12 348 181 123 93 chr10 95728858 95729062 -44587703 + L1MC4 LINE L1 7832 8041 -1 2931 130 31 24 chr10 95730884 95731429 -44585336 - L1MA8 LINE L1 -207 6084 5536 379 304 106 0 chr10 95731605 95731766 -44584999 + MIR SINE MIR 35 212 -50 3115 135 19 84 chr10 95731770 95732164 -44584601 + L1PA16 LINE L1 5520 5853 -313 2340 103 0 0 chr10 95732164 95732465 -44584300 - AluSq SINE Alu -12 301 1 3115 135 19 84 chr10 95732465 95732745 -44584020 + L1PA16 LINE L1 5853 6150 -16 429 246 179 8 chr10 95732819 95732953 -44583812 - MER5A DNA MER1_type 0 189 33 590 223 16 0 chr10 95733240 95733361 -44583404 + FLAM_A SINE Alu 3 125 -8 1731 157 0 11 chr10 95733373 95733647 -44583118 - AluJo SINE Alu -25 287 17 456 301 32 0 chr10 95734056 95734179 -44582586 + MIR SINE MIR 60 186 -76 202 313 27 60 chr10 95734362 95734512 -44582253 + MIR SINE MIR 47 191 -71 195 42 0 0 chr10 95734876 95734900 -44581865 + (CTG)n Simple_repeat Simple_repeat 1 24 0 346 127 0 0 chr10 95735339 95735402 -44581363 + L1PA16 LINE L1 6100 6162 -4 487 300 116 50 chr10 95735408 95735961 -44580804 + L2 LINE L2 2698 3272 0 272 275 12 0 chr10 95736236 95736316 -44580449 - MLT1I LTR MaLR -261 148 68 27 0 0 0 chr10 95736624 95736651 -44580114 + AT_rich Low_complexity Low_complexity 1 27 0 294 234 106 0 chr10 95737324 95737418 -44579347 + MIR SINE MIR 33 136 -72 261 263 211 9 chr10 95737518 95737632 -44579133 + L2 LINE L2 3136 3272 0 24 0 0 0 chr10 95738217 95738241 -44578524 + AT_rich Low_complexity Low_complexity 1 24 0 2491 108 0 37 chr10 95739049 95739257 -44577508 - THE1B LTR MaLR 0 364 150 1961 113 0 14 chr10 95739257 95739540 -44577225 + AluSx SINE Alu 1 279 -33 270 0 0 0 chr10 95739546 95739576 -44577189 + (CA)n Simple_repeat Simple_repeat 2 31 0 2491 108 0 37 chr10 95739576 95739738 -44577027 - THE1B LTR MaLR -219 145 1 307 338 136 21 chr10 95740841 95741172 -44575593 + L1M4 LINE L1 4735 5103 -1043 1298 186 15 4 chr10 95741185 95741459 -44575306 + L1 LINE L1 5001 5277 -869 6976 58 8 1 chr10 95741564 95742608 -44574157 + L1PA7 LINE L1 5099 6148 -6 1731 143 2 92 chr10 95743218 95743611 -44573154 + MLT1B LTR MaLR 1 358 -32 284 184 126 46 chr10 95744576 95744663 -44572102 - MIR SINE MIR -155 107 14 355 307 91 49 chr10 95745309 95745680 -44571085 - L2 LINE L2 -223 3049 2655 299 247 21 41 chr10 95745746 95745843 -44570922 - MIR3 SINE MIR -5 203 109 21 0 0 0 chr10 95745982 95746003 -44570762 + AT_rich Low_complexity Low_complexity 1 21 0 1588 97 29 118 chr10 95746106 95746487 -44570278 - L1P LINE L1 -1044 5102 4756 460 275 113 13 chr10 95746824 95747133 -44569632 - L1ME4a LINE L1 -229 5892 5553 476 301 30 0 chr10 95747655 95747821 -44568944 - LTR33A LTR ERVL 0 523 353 400 305 37 48 chr10 95747887 95748055 -44568710 - LTR33A LTR ERVL -321 200 45 444 50 0 0 chr10 95748057 95748117 -44568648 + MADE1 DNA Mariner 1 60 -20 298 220 30 68 chr10 95748647 95748779 -44567986 + HAL1 LINE L1 2245 2371 -136 1012 261 90 30 chr10 95748892 95749226 -44567539 + L2 LINE L2 2921 3274 -39 237 128 25 0 chr10 95749992 95750037 -44566728 + MLT2D LTR ERVL 1 41 -373 302 272 93 53 chr10 95750056 95750379 -44566386 - L1MEd LINE L1 -5281 838 503 9623 93 8 0 chr10 95750721 95752871 -44563894 + L1PA7 LINE L1 3970 6152 -2 263 286 38 29 chr10 95753003 95753108 -44563657 - L2 LINE L2 0 3313 3208 291 135 58 0 chr10 95753478 95753530 -44563235 - MER5A DNA MER1_type -1 188 134 1220 161 0 105 chr10 95753538 95753805 -44562960 - AluJo SINE Alu -69 243 5 535 191 32 0 chr10 95753807 95753901 -44562864 - MER5A DNA MER1_type -76 113 17 983 158 131 41 chr10 95754400 95754465 -44562300 - MER33 DNA MER1_type -2261 324 266 2003 139 3 16 chr10 95754465 95754781 -44561984 + AluJb SINE Alu 1 312 0 983 158 131 41 chr10 95754781 95755006 -44561759 - MER33 DNA MER1_type -2319 266 8 1023 233 161 35 chr10 95755203 95755607 -44561158 + MLT1J LTR MaLR 12 466 -45 421 284 180 28 chr10 95755739 95755950 -44560815 - MIR SINE MIR 0 262 20 340 333 9 0 chr10 95756514 95756628 -44560137 + L2 LINE L2 3154 3268 -4 202 260 0 0 chr10 95757055 95757105 -44559660 + CT-rich Low_complexity Low_complexity 4 53 0 414 300 10 0 chr10 95758278 95758378 -44558387 + L2 LINE L2 3171 3271 -1 527 215 126 11 chr10 95758412 95758592 -44558173 - MIR SINE MIR 0 262 61 843 231 47 91 chr10 95758873 95759368 -44557397 + L2 LINE L2 2733 3211 -102 378 0 0 0 chr10 95759794 95759836 -44556929 + (TTG)n Simple_repeat Simple_repeat 3 44 0 743 252 83 29 chr10 95761580 95761822 -44554943 - MIR SINE MIR 0 262 8 1932 147 0 38 chr10 95762033 95762346 -44554419 + AluJo SINE Alu 1 301 -11 574 298 41 92 chr10 95763724 95764039 -44552726 + L2 LINE L2 2970 3268 -4 198 0 0 0 chr10 95764954 95764976 -44551789 + (TAA)n Simple_repeat Simple_repeat 3 24 0 1036 97 81 9 chr10 95765265 95765464 -44551301 - THE1B LTR MaLR 0 364 161 638 308 47 5 chr10 95766391 95766602 -44550163 + MIR SINE MIR 42 261 -1 188 325 67 17 chr10 95766732 95766852 -44549913 + L2 LINE L2 3147 3272 0 265 143 0 0 chr10 95767072 95767121 -44549644 + L1MA10 LINE L1 6279 6327 -7 724 184 0 16 chr10 95767152 95767277 -44549488 + FLAM_C SINE Alu 2 124 -19 33 58 0 35 chr10 95767278 95767365 -44549400 + AT_rich Low_complexity Low_complexity 1 84 0 306 303 63 80 chr10 95767386 95767686 -44549079 + L1M4 LINE L1 3975 4269 -1877 265 267 81 42 chr10 95767766 95768174 -44548591 + L1M4 LINE L1 4405 4828 -1318 25 65 0 0 chr10 95768232 95768278 -44548487 + AT_rich Low_complexity Low_complexity 1 46 0 973 253 107 24 chr10 95768617 95768992 -44547773 + LTR33 LTR ERVL 116 521 0 254 50 25 0 chr10 95769031 95769071 -44547694 + (TC)n Simple_repeat Simple_repeat 2 42 0 210 216 0 0 chr10 95769175 95769212 -44547553 + (CA)n Simple_repeat Simple_repeat 2 38 0 1109 158 70 9 chr10 95769338 95769363 -44547402 + L1MD2 LINE L1 6112 6134 -225 243 0 0 0 chr10 95769363 95769390 -44547375 + (CA)n Simple_repeat Simple_repeat 2 28 0 1109 158 70 9 chr10 95769390 95769592 -44547173 + L1MD2 LINE L1 6134 6353 -6 2088 138 7 0 chr10 95769600 95769890 -44546875 - AluSx SINE Alu -20 292 1 2129 123 3 0 chr10 95769901 95770193 -44546572 - AluSx SINE Alu -17 295 3 2270 90 30 0 chr10 95770488 95770789 -44545976 + AluSg SINE Alu 1 310 0 557 287 24 57 chr10 95770972 95771219 -44545546 + L2 LINE L2 1083 1321 -1993 1705 309 126 27 chr10 95771229 95772402 -44544363 + L2 LINE L2 1790 3073 -199 1718 145 28 14 chr10 95772480 95772769 -44543996 + MER1B DNA MER1_type 46 338 -1 207 286 14 107 chr10 95772769 95772909 -44543856 + L2 LINE L2 3150 3276 -37 874 294 118 51 chr10 95773086 95773460 -44543305 + L2 LINE L2 2874 3272 0 2060 128 24 0 chr10 95773708 95773997 -44542768 - AluSx SINE Alu -16 296 1 410 217 86 63 chr10 95774677 95774852 -44541913 + MLT1J LTR MaLR 287 465 -46 314 225 12 62 chr10 95774890 95774970 -44541795 + MER5A DNA MER1_type 1 76 -113 2132 291 81 24 chr10 95775206 95776168 -44540597 + L2 LINE L2 2301 3312 -1 573 262 78 59 chr10 95776339 95776610 -44540155 + MLT1L LTR MaLR 120 395 -220 4121 116 6 11 chr10 95776616 95777088 -44539677 + MER51C LTR ERV1 1 451 -189 2261 125 19 32 chr10 95777088 95777457 -44539308 - THE1B LTR MaLR 0 364 1 4121 116 6 11 chr10 95777457 95777647 -44539118 + MER51C LTR ERV1 451 640 0 760 224 47 14 chr10 95777647 95777854 -44538911 + MLT1L LTR MaLR 398 611 -4 214 273 0 0 chr10 95777926 95777970 -44538795 + polypurine Low_complexity Low_complexity 2 45 0 32 26 0 0 chr10 95778200 95778239 -44538526 + AT_rich Low_complexity Low_complexity 1 39 0 22 70 0 0 chr10 95778808 95778851 -44537914 + AT_rich Low_complexity Low_complexity 1 43 0 2394 125 53 0 chr10 95779285 95779660 -44537105 - L1PA15 LINE L1 0 6816 6422 21670 41 10 0 chr10 95779660 95783112 -44533653 - L1PA5 LINE L1 -132 6022 2541 16435 205 27 32 chr10 95783111 95785478 -44531287 - L1PA15 LINE L1 -743 6054 3677 * 720 178 0 0 chr10 95785478 95785596 -44531169 - AluJb SINE Alu -192 120 3 16435 205 27 32 chr10 95785596 95787644 -44529121 - L1PA15 LINE L1 -3120 3677 1533 216 0 0 0 chr10 95787644 95787668 -44529097 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 16435 205 27 32 chr10 95787668 95788753 -44528012 - L1PA15 LINE L1 -5264 1533 444 672 197 88 0 chr10 95788784 95788921 -44527844 - L1PA15 LINE L1 -6638 149 1 626 289 50 17 chr10 95790439 95790619 -44526146 + MIR SINE MIR 41 226 -36 408 299 53 41 chr10 95791083 95791327 -44525438 - L1ME3A LINE L1 -235 5935 5689 6718 165 23 63 chr10 95791937 95792200 -44524565 + L1M3f LINE L1 2 274 -5468 1130 50 0 0 chr10 95792200 95792340 -44524425 + L1PA5 LINE L1 6011 6150 -4 6718 165 23 63 chr10 95792340 95792377 -44524388 + L1M3f LINE L1 274 311 -5431 1951 137 7 3 chr10 95792377 95792684 -44524081 + AluSx SINE Alu 5 312 0 6718 165 23 63 chr10 95792684 95793166 -44523599 + L1M3f LINE L1 311 811 -4931 1402 208 41 10 chr10 95793166 95793459 -44523306 + AluJo SINE Alu 1 302 -10 6718 165 23 63 chr10 95793459 95794425 -44522340 + L1M3f LINE L1 811 1677 -4065 503 206 48 0 chr10 95794422 95794548 -44522217 + L1MA4 LINE L1 6167 6298 -2 * 2308 74 3 10 chr10 95794557 95794854 -44521911 + AluSx SINE Alu 1 295 -17 28 48 0 0 chr10 95794876 95794918 -44521847 + AT_rich Low_complexity Low_complexity 1 42 0 1180 206 74 31 chr10 95795213 95795316 -44521449 + L1ME3 LINE L1 5442 5539 -625 2357 59 3 13 chr10 95795316 95795620 -44521145 + AluY SINE Alu 1 301 -10 1180 206 74 31 chr10 95795620 95795841 -44520924 + L1ME3 LINE L1 5539 5780 -384 487 122 33 11 chr10 95795836 95795926 -44520839 - L1ME2 LINE L1 -283 5881 5790 * 734 154 0 46 chr10 95796865 95796995 -44519770 + FLAM_C SINE Alu 1 124 -9 45 75 0 0 chr10 95796995 95797089 -44519676 + AT_rich Low_complexity Low_complexity 1 94 0 225 276 16 65 chr10 95797492 95797535 -44519230 + L1MC4 LINE L1 7925 7969 -73 1023 178 46 36 chr10 95797535 95797710 -44519055 - MER58A DNA MER1_type -2198 222 42 2317 67 3 0 chr10 95797710 95798026 -44518739 + AluY SINE Alu 1 317 0 1023 178 46 36 chr10 95798026 95798068 -44518697 - MER58A DNA MER1_type -2378 42 2 225 276 16 65 chr10 95798068 95798147 -44518618 + L1MC4 LINE L1 7969 8041 -1 596 266 39 52 chr10 95799396 95799494 -44517271 + MIR SINE MIR 20 118 -144 1721 180 136 37 chr10 95799494 95799950 -44516815 + MLT1D LTR MaLR 5 505 0 596 266 39 52 chr10 95799950 95800084 -44516681 + MIR SINE MIR 118 249 -13 321 315 161 23 chr10 95800641 95800771 -44515994 - L2 LINE L2 -2 3270 3123 1914 134 24 30 chr10 95800880 95801208 -44515557 + THE1C LTR MaLR 50 375 0 401 272 65 14 chr10 95801524 95801741 -44515024 + L1M3f LINE L1 2515 2742 -3586 498 326 82 43 chr10 95801879 95802301 -44514464 + L1M3f LINE L1 2935 3384 -2944 2243 118 7 0 chr10 95802301 95802607 -44514158 - AluSx SINE Alu -1 311 4 498 326 82 43 chr10 95802607 95802718 -44514047 + L1M3f LINE L1 3384 3489 -2839 22 35 0 0 chr10 95803030 95803059 -44513706 + AT_rich Low_complexity Low_complexity 1 29 0 2632 227 38 27 chr10 95803125 95803944 -44512821 + L1M3f LINE L1 4018 4845 -1483 385 199 152 7 chr10 95804067 95804168 -44512597 - AluJo SINE Alu -96 206 111 1328 171 83 88 chr10 95804170 95804284 -44512481 + L1ME3 LINE L1 5789 5902 -260 1501 178 3 83 chr10 95804284 95804610 -44512155 + AluJo SINE Alu 6 305 -7 1328 171 83 88 chr10 95804610 95804870 -44511895 + L1ME3 LINE L1 5902 6161 -1 42595 33 24 3 chr10 95805460 95811483 -44505282 + L1PA3 LINE L1 1 6151 -4 2818 120 7 41 chr10 95812279 95812722 -44504043 - MSTC LTR MaLR 0 428 1 2167 162 0 0 chr10 95812753 95813086 -44503679 - MER1B DNA MER1_type -1 336 4 21 71 0 0 chr10 95814315 95814357 -44502408 + AT_rich Low_complexity Low_complexity 1 42 0 388 219 0 0 chr10 95815227 95815309 -44501456 - L1ME3A LINE L1 -5 6234 6153 524 207 237 15 chr10 95815378 95815576 -44501189 - L1ME3A LINE L1 -88 6151 5910 1542 230 78 8 chr10 95815585 95815972 -44500793 - L1ME3A LINE L1 -384 5855 5442 835 237 0 0 chr10 95816017 95816173 -44500592 + FRAM SINE Alu 1 156 -10 21 0 0 0 chr10 95816222 95816243 -44500522 + AT_rich Low_complexity Low_complexity 1 21 0 802 206 28 28 chr10 95816366 95816459 -44500306 + L1PB4 LINE L1 2377 2472 -4377 2012 109 20 33 chr10 95816459 95816761 -44500004 + AluSx SINE Alu 1 298 -14 802 206 28 28 chr10 95816761 95816847 -44499918 + L1PB4 LINE L1 2471 2556 -4293 1097 145 0 0 chr10 95816855 95817014 -44499751 + AluSg/x SINE Alu 130 288 -22 1626 264 10 14 chr10 95817015 95817559 -44499206 + L1PB4 LINE L1 2554 3096 -3753 1193 191 20 0 chr10 95817665 95817917 -44498848 + L1PB4 LINE L1 3019 3275 -3574 * 10395 168 33 14 chr10 95817906 95820844 -44495921 + L1PB4 LINE L1 3690 6691 -168 2011 131 3 3 chr10 95820844 95821147 -44495618 + AluSx SINE Alu 1 303 0 10395 168 33 14 chr10 95821147 95821315 -44495450 + L1PB4 LINE L1 6691 6854 -5 24 32 0 0 chr10 95821793 95821824 -44494941 + AT_rich Low_complexity Low_complexity 1 31 0 223 135 0 39 chr10 95821837 95821889 -44494876 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 200 337 0 0 chr10 95822238 95822324 -44494441 + CT-rich Low_complexity Low_complexity 6 91 0 1045 268 76 26 chr10 95823249 95823708 -44493057 - L1ME3A LINE L1 -1108 5107 4626 1386 238 79 25 chr10 95823708 95824228 -44492537 + MLT2F LTR ERVL 8 605 -58 192 200 0 0 chr10 95824228 95824273 -44492492 + (TA)n Simple_repeat Simple_repeat 1 45 0 1622 172 13 78 chr10 95824307 95824679 -44492086 - MER7A DNA MER2_type 0 346 1 329 86 0 7 chr10 95824689 95824740 -44492025 + MLT2F LTR ERVL 506 663 0 5075 257 79 27 chr10 95824742 95826158 -44490607 - L1MEc LINE L1 -1592 4623 3282 2422 73 0 6 chr10 95826158 95826471 -44490294 - AluY SINE Alu 0 311 1 5075 257 79 27 chr10 95826471 95827087 -44489678 - L1MEc LINE L1 -2933 3282 2699 1485 223 35 16 chr10 95827087 95827454 -44489311 - MLT1A2 LTR MaLR 0 374 1 5075 257 79 27 chr10 95827454 95827931 -44488834 - L1MEc LINE L1 -3516 2699 2025 2029 168 78 34 chr10 95827931 95828134 -44488631 - MLT1C LTR MaLR 0 467 275 3497 74 13 0 chr10 95828134 95828581 -44488184 + MLT2A2 LTR ERVL 1 453 0 2029 168 78 34 chr10 95828581 95828824 -44487941 - MLT1C LTR MaLR -192 275 1 327 326 70 51 chr10 95828840 95828958 -44487807 - L1MEc LINE L1 -4387 2009 1895 1680 173 44 10 chr10 95828958 95829253 -44487512 - AluJo SINE Alu -5 307 3 327 326 70 51 chr10 95829253 95829407 -44487358 - L1MEc LINE L1 -4501 1895 1732 270 239 56 53 chr10 95829411 95829699 -44487066 - L1MEc LINE L1 -4985 1230 794 207 0 0 0 chr10 95829863 95829886 -44486879 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1493 177 34 19 chr10 95829892 95830158 -44486607 - AluJo SINE Alu -42 270 1 1576 161 47 40 chr10 95830403 95830701 -44486064 + AluJo SINE Alu 2 301 -11 309 104 0 8 chr10 95831660 95831717 -44485048 - L1MA5A LINE L1 0 6300 6244 213 39 0 0 chr10 95831717 95831743 -44485022 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1386 164 0 56 chr10 95831748 95831998 -44484767 - AluJb SINE Alu -33 279 44 1482 90 9 0 chr10 95832000 95832211 -44484554 - L1MA5A LINE L1 -49 6248 6036 2461 166 62 7 chr10 95832235 95832668 -44484097 - LTR32 LTR ERVL 0 471 15 1720 168 28 0 chr10 95832881 95833166 -44483599 + AluJo SINE Alu 1 293 -19 248 333 64 8 chr10 95833173 95833422 -44483343 - L1M4 LINE L1 -1332 4814 4552 477 281 110 75 chr10 95833441 95833814 -44482951 + L1ME LINE L1 5434 5819 -345 566 198 30 0 chr10 95834054 95834155 -44482610 + FLAM_C SINE Alu 22 125 -18 2121 134 0 0 chr10 95834183 95834488 -44482277 + AluSx SINE Alu 1 305 -7 1296 248 128 10 chr10 95835080 95835463 -44481302 + MLT1J1 LTR MaLR 1 428 -18 1438 268 88 5 chr10 95836055 95836439 -44480326 + LTR16A LTR ERVL 1 416 -34 879 191 88 126 chr10 95837040 95837438 -44479327 - MLT1B LTR MaLR -2 388 6 6704 196 30 29 chr10 95837443 95838808 -44477957 - MLT1C-int LTR MaLR 0 1371 6 1310 192 20 8 chr10 95838815 95839065 -44477700 - MLT1C LTR MaLR -2 465 213 624 252 71 6 chr10 95839371 95839629 -44477136 - L1M4 LINE L1 -2378 3768 3497 241 255 96 11 chr10 95839637 95839731 -44477034 + L1M4 LINE L1 3823 3924 -2222 2039 129 0 13 chr10 95839732 95840043 -44476722 + AluSg SINE Alu 1 307 -3 1015 164 0 23 chr10 95840153 95840330 -44476435 + FRAM SINE Alu 2 174 -2 243 333 37 0 chr10 95840334 95840442 -44476323 + L1M4 LINE L1 4027 4138 -2008 496 140 0 65 chr10 95840710 95840817 -44475948 - L1MC5 LINE L1 -54 7907 7808 671 269 152 25 chr10 95841104 95841711 -44475054 + L1M4 LINE L1 4415 5098 -1048 446 290 20 5 chr10 95841770 95841970 -44474795 + L1M4 LINE L1 5190 5392 -754 586 207 51 62 chr10 95841972 95842228 -44474537 + MLT1A1 LTR MaLR 1 249 -125 532 116 0 12 chr10 95842250 95842336 -44474429 - L1MA3 LINE L1 0 6305 6221 1808 84 36 18 chr10 95842497 95842772 -44473993 - L1MA2 LINE L1 -18 6286 6007 644 167 22 51 chr10 95842773 95842911 -44473854 + MLT1A1 LTR MaLR 228 361 -4 1260 163 48 5 chr10 95842948 95843157 -44473608 - AluJo SINE Alu -8 304 87 1265 119 0 20 chr10 95843179 95843381 -44473384 - Tigger1 DNA MER2_type 0 2418 2221 21469 140 59 18 chr10 95843384 95846372 -44470393 + L1MA3 LINE L1 16 2880 -4844 2424 80 0 0 chr10 95846372 95846672 -44470093 + AluSq SINE Alu 1 300 -13 21469 140 59 18 chr10 95846672 95848259 -44468506 + L1MA3 LINE L1 2880 4401 -3323 2428 67 6 10 chr10 95848259 95848571 -44468194 + AluY SINE Alu 1 311 0 21469 140 59 18 chr10 95848571 95849524 -44467241 + L1MA3 LINE L1 4401 5314 -2410 1470 201 34 27 chr10 95849524 95849822 -44466943 + AluJo SINE Alu 1 300 -12 21469 140 59 18 chr10 95849822 95850750 -44466015 + L1MA3 LINE L1 5314 6203 -1521 2190 117 0 0 chr10 95850750 95851058 -44465707 + AluSx SINE Alu 5 312 0 21469 140 59 18 chr10 95851058 95851993 -44464772 + L1MA3 LINE L1 6203 7724 0 2104 121 35 109 chr10 95852009 95852497 -44464268 - Tigger1 DNA MER2_type -182 2236 1785 453 177 42 52 chr10 95852501 95852597 -44464168 - FRAM SINE Alu -12 164 70 863 187 39 39 chr10 95852597 95852827 -44463938 - Charlie3 DNA MER1_type -2480 230 1 4348 131 28 3 chr10 95852827 95853536 -44463229 - Tigger1 DNA MER2_type -1493 925 199 180 0 0 0 chr10 95854209 95854229 -44462536 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2306 98 0 0 chr10 95857728 95858025 -44458740 - AluSg SINE Alu -13 297 1 539 298 242 19 chr10 95858418 95858794 -44457971 + L3 LINE CR1 1050 1509 -68 734 150 8 15 chr10 95859487 95859620 -44457145 + AluJb SINE Alu 3 134 -178 1473 171 65 4 chr10 95859621 95859884 -44456881 + AluJb SINE Alu 1 279 -33 325 276 51 0 chr10 95860469 95860567 -44456198 - L2 LINE L2 -3 3310 3208 2099 108 0 24 chr10 95861029 95861316 -44455449 - AluSq SINE Alu -33 280 1 198 103 0 0 chr10 95862286 95862315 -44454450 + (T)n Simple_repeat Simple_repeat 1 29 0 315 345 35 17 chr10 95863845 95863961 -44452804 - L2 LINE L2 -5 3267 3150 2364 74 0 7 chr10 95863966 95864265 -44452500 + AluY SINE Alu 2 298 -13 622 283 228 18 chr10 95864311 95864911 -44451854 - L2 LINE L2 -67 3246 2531 505 291 158 0 chr10 95864945 95865103 -44451662 - L2 LINE L2 -1037 2277 2095 508 208 8 33 chr10 95865124 95865244 -44451521 + L2 LINE L2 2339 2455 -859 2566 44 0 0 chr10 95865637 95865935 -44450830 + AluY SINE Alu 1 298 -13 235 284 37 99 chr10 95865935 95866093 -44450672 + L2 LINE L2 2584 2731 -583 202 208 21 42 chr10 95866255 95866303 -44450462 - L2 LINE L2 -35 3278 3232 715 131 77 8 chr10 95866353 95866483 -44450282 + AluSq/x SINE Alu 1 139 -173 494 252 91 65 chr10 95866663 95866964 -44449801 + L1MC4a LINE L1 5608 5410 -711 1815 166 16 23 chr10 95866964 95867272 -44449493 + AluJo SINE Alu 1 306 -6 494 252 91 65 chr10 95867272 95867524 -44449241 + L1MC4a LINE L1 5409 5653 -468 273 342 9 26 chr10 95868278 95868392 -44448373 - L2 LINE L2 -37 3276 3165 474 246 149 0 chr10 95868394 95868508 -44448257 + MER5B DNA MER1_type 3 133 -45 270 195 0 91 chr10 95869272 95869349 -44447416 + MIR SINE MIR 118 187 -75 31 0 0 0 chr10 95869393 95869424 -44447341 + AT_rich Low_complexity Low_complexity 1 31 0 275 278 98 38 chr10 95869792 95869925 -44446840 - MIR3 SINE MIR -58 150 10 272 225 0 28 chr10 95870272 95870343 -44446422 + Tigger5 DNA MER2_type 2250 2318 -5 409 209 12 0 chr10 95870473 95870559 -44446206 + Tigger5 DNA MER2_type 2237 2323 0 222 206 0 33 chr10 95870620 95870712 -44446053 + (CA)n Simple_repeat Simple_repeat 2 90 0 291 305 13 26 chr10 95870737 95870818 -44445947 - L1M4 LINE L1 -2216 3930 3850 2293 107 0 10 chr10 95870818 95871118 -44445647 - AluSg SINE Alu -13 297 1 291 305 13 26 chr10 95871118 95871187 -44445578 - L1M4 LINE L1 -2296 3850 3782 1040 167 56 0 chr10 95871881 95872079 -44444686 + MER20 DNA MER1_type 1 209 -10 466 319 28 22 chr10 95872092 95872274 -44444491 - LTR33 LTR ERVL -306 215 33 390 259 106 8 chr10 95872401 95872801 -44443964 - L1M4 LINE L1 -599 5585 5127 901 57 0 0 chr10 95872844 95872950 -44443815 + AluY SINE Alu 192 297 -14 340 297 183 40 chr10 95872979 95873302 -44443463 - L1M4 LINE L1 -1089 5057 4689 255 202 131 0 chr10 95874022 95874106 -44442659 - HAL1 LINE L1 -901 1606 1512 356 199 146 12 chr10 95874317 95874488 -44442277 - L1MEd LINE L1 -5000 1119 926 319 226 71 12 chr10 95875150 95875234 -44441531 - L2 LINE L2 0 3272 3184 341 237 86 0 chr10 95875241 95875334 -44441431 - MER5C DNA MER1_type -5 319 219 449 252 8 25 chr10 95875343 95875462 -44441303 - MER5C DNA MER1_type -207 117 1 789 190 34 62 chr10 95879170 95879427 -44437338 + L1MC4 LINE L1 6242 6358 -1 23 68 0 0 chr10 95879762 95879806 -44436959 + AT_rich Low_complexity Low_complexity 1 44 0 654 331 70 35 chr10 95880040 95880536 -44436229 + L2 LINE L2 2490 3043 -229 824 238 6 6 chr10 95880980 95881152 -44435613 + MER5B DNA MER1_type 7 178 0 770 229 6 24 chr10 95881178 95881344 -44435421 + MER5A DNA MER1_type 27 189 0 247 307 23 0 chr10 95881802 95881890 -44434875 + MIR SINE MIR 173 262 0 2370 98 0 10 chr10 95882650 95882956 -44433809 - AluSx SINE Alu -9 303 1 665 139 0 0 chr10 95886229 95886337 -44430428 + FLAM_C SINE Alu 35 142 -1 2239 94 19 13 chr10 95886753 95887061 -44429704 - AluSp SINE Alu -3 310 1 843 164 159 17 chr10 95887073 95887305 -44429460 - L1MD3 LINE L1 -1 7994 7730 2314 89 0 10 chr10 95889163 95889465 -44427300 - AluY SINE Alu -12 299 1 2489 81 0 0 chr10 95889484 95889794 -44426971 - AluY SINE Alu -1 310 1 220 257 27 167 chr10 95890086 95890308 -44426457 - MIR3 SINE MIR -6 202 12 2355 89 3 3 chr10 95891002 95891304 -44425461 - AluSq SINE Alu -11 302 1 2294 86 3 10 chr10 95891353 95891656 -44425109 - AluSx SINE Alu -11 301 1 213 240 0 0 chr10 95892424 95892474 -44424291 + T-rich Low_complexity Low_complexity 1 50 0 2209 100 3 3 chr10 95892603 95892903 -44423862 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr10 95893416 95893439 -44423326 + AT_rich Low_complexity Low_complexity 1 23 0 1056 143 5 54 chr10 95893529 95893732 -44423033 + MER46A DNA MER2_type 44 236 0 2035 109 46 20 chr10 95894086 95894390 -44422375 + AluSx SINE Alu 1 312 0 655 292 76 28 chr10 95894611 95894861 -44421904 - MIR SINE MIR 0 262 1 24 53 0 0 chr10 95895620 95895658 -44421107 + AT_rich Low_complexity Low_complexity 1 38 0 195 279 44 29 chr10 95896570 95896638 -44420127 + MIR3 SINE MIR 92 160 -48 1923 167 39 21 chr10 95898201 95898584 -44418181 + MLT1B LTR MaLR 1 390 0 1772 168 34 3 chr10 95898950 95899248 -44417517 - AluJb SINE Alu -5 307 1 24 32 0 0 chr10 95900125 95900156 -44416609 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 95900699 95900720 -44416045 + AT_rich Low_complexity Low_complexity 1 21 0 2050 145 3 0 chr10 95901374 95901678 -44415087 - AluSx SINE Alu -5 307 3 385 285 223 0 chr10 95901833 95901963 -44414802 + MER5A DNA MER1_type 30 188 -1 514 212 45 3 chr10 95901972 95902104 -44414661 - MER5A DNA MER1_type 0 189 15 768 148 0 2 chr10 95902147 95902403 -44414362 + AluSx SINE Alu 1 307 -5 343 210 99 0 chr10 95902414 95902495 -44414270 + MER105 DNA DNA 112 200 -4 2236 57 11 4 chr10 95902573 95902873 -44413892 + AluSq SINE Alu 1 302 0 267 277 18 36 chr10 95903039 95903151 -44413614 - MER5A DNA MER1_type -40 149 40 252 0 0 0 chr10 95903674 95903702 -44413063 + (A)n Simple_repeat Simple_repeat 1 28 0 1324 120 0 21 chr10 95903971 95904163 -44412602 - AluSx SINE Alu -122 190 3 413 300 29 29 chr10 95905169 95905309 -44411456 + MIR3 SINE MIR 55 194 -14 340 253 59 24 chr10 95905348 95905518 -44411247 + L1P LINE L1 4962 5137 -1009 616 109 0 0 chr10 95905611 95905703 -44411062 + AluSp/q SINE Alu 216 307 -6 288 0 0 0 chr10 95905705 95905737 -44411028 + (CA)n Simple_repeat Simple_repeat 2 33 0 1856 127 68 0 chr10 95905830 95906149 -44410616 + AluSq SINE Alu 1 339 0 2230 122 0 3 chr10 95906149 95906460 -44410305 + AluSg SINE Alu 1 310 0 259 245 132 53 chr10 95906677 95906848 -44409917 + L1ME2 LINE L1 5504 5689 -432 245 268 28 28 chr10 95907051 95907122 -44409643 + MER5A DNA MER1_type 1 71 -118 1159 233 93 0 chr10 95908326 95908669 -44408096 + L1ME2 LINE L1 5763 6137 -27 354 262 89 74 chr10 95908728 95908930 -44407835 + L1MC4 LINE L1 7838 8042 0 610 212 9 0 chr10 95909293 95909406 -44407359 - MER81 DNA DNA 0 114 1 192 244 22 0 chr10 95909907 95909952 -44406813 + L3b LINE CR1 1530 1575 -8 22 0 0 0 chr10 95910107 95910129 -44406636 + AT_rich Low_complexity Low_complexity 1 22 0 2389 81 0 0 chr10 95911220 95911516 -44405249 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr10 95912440 95912461 -44404304 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 95913185 95913207 -44403558 + AT_rich Low_complexity Low_complexity 1 22 0 1722 204 170 67 chr10 95915004 95915396 -44401369 - L1ME2 LINE L1 -10 6154 5804 2016 114 70 18 chr10 95915396 95915737 -44401028 + MER46B DNA MER2_type 3 236 0 1722 204 170 67 chr10 95915737 95915984 -44400781 - L1ME2 LINE L1 -360 5804 5452 337 330 56 37 chr10 95915995 95916210 -44400555 - L3 LINE CR1 -30 1547 1329 1128 302 74 52 chr10 95916240 95916335 -44400430 - L3 LINE CR1 -387 1190 1099 1741 173 3 7 chr10 95916335 95916618 -44400147 + AluJb SINE Alu 1 282 -30 267 104 0 0 chr10 95916622 95916670 -44400095 + (CAAAC)n Simple_repeat Simple_repeat 4 51 0 1128 302 74 52 chr10 95916670 95917228 -44399537 - L3 LINE CR1 -480 1097 517 2400 85 3 3 chr10 95918112 95918417 -44398348 + AluSx SINE Alu 3 307 -5 904 161 13 7 chr10 95918673 95918822 -44397943 - AluSg/x SINE Alu -16 296 147 1874 127 36 0 chr10 95918880 95919181 -44397584 + AluSx SINE Alu 1 311 0 29 0 0 0 chr10 95919498 95919527 -44397238 + AT_rich Low_complexity Low_complexity 1 29 0 228 353 0 0 chr10 95919661 95919729 -44397036 + L2 LINE L2 2561 2628 -686 272 367 33 8 chr10 95919925 95920045 -44396720 + L2 LINE L2 2925 3047 -225 2163 110 20 0 chr10 95920406 95920706 -44396059 + AluSx SINE Alu 1 306 -6 25 51 0 0 chr10 95921594 95921633 -44395132 + AT_rich Low_complexity Low_complexity 1 39 0 1861 152 0 4 chr10 95922907 95923184 -44393581 + AluJb SINE Alu 3 278 -34 380 169 0 0 chr10 95924102 95924161 -44392604 - Tigger4(Zombi) DNA MER2_type 0 2731 2673 21 0 0 0 chr10 95924748 95924769 -44391996 + AT_rich Low_complexity Low_complexity 1 21 0 2513 69 0 0 chr10 95925489 95925794 -44390971 + AluY SINE Alu 1 305 -6 907 186 128 25 chr10 95925964 95926238 -44390527 - MER33 DNA MER1_type 0 324 23 246 314 38 19 chr10 95926716 95926821 -44389944 + L2 LINE L2 2555 2661 -653 6027 138 104 5 chr10 95926852 95927174 -44389591 - Tigger3b DNA MER2_type -1797 1231 942 203 61 30 0 chr10 95927174 95927207 -44389558 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 6027 138 104 5 chr10 95927207 95928004 -44388761 - Tigger3b DNA MER2_type -2086 942 1 214 299 149 30 chr10 95928270 95928404 -44388361 + L2 LINE L2 3159 3308 -5 2480 60 3 3 chr10 95929658 95929959 -44386806 - AluY SINE Alu -10 301 1 2318 81 10 10 chr10 95930513 95930862 -44385903 + AluSg SINE Alu 1 349 0 2212 83 0 21 chr10 95930929 95931247 -44385518 + AluY SINE Alu 1 312 0 1983 96 4 0 chr10 95931705 95931966 -44384799 - AluSp SINE Alu -3 310 49 236 302 130 30 chr10 95932044 95932213 -44384552 + L2 LINE L2 3128 3313 0 213 39 0 0 chr10 95932550 95932576 -44384189 + (T)n Simple_repeat Simple_repeat 1 26 0 307 143 0 0 chr10 95933292 95933341 -44383424 + AluS SINE Alu 233 281 -20 198 0 0 0 chr10 95933397 95933419 -44383346 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1346 158 94 41 chr10 95933422 95933688 -44383077 - AluJb SINE Alu -30 282 3 660 164 16 31 chr10 95934304 95934432 -44382333 - FLAM_C SINE Alu -7 126 1 27 0 0 0 chr10 95934629 95934656 -44382109 + AT_rich Low_complexity Low_complexity 1 27 0 370 246 158 9 chr10 95934920 95935034 -44381731 - L2 LINE L2 0 3313 3183 248 189 0 0 chr10 95936264 95936317 -44380448 - L1 LINE L1 -1109 5037 4985 2301 66 21 3 chr10 95936317 95936606 -44380159 - AluSx SINE Alu -18 294 1 2215 124 71 21 chr10 95937196 95937631 -44379134 - L1MA5 LINE L1 -6 6294 5838 2169 83 45 0 chr10 95939077 95939367 -44377398 - AluSc SINE Alu -6 303 1 2846 178 114 78 chr10 95939381 95940121 -44376644 - L1MB7 LINE L1 -10 6174 5362 252 111 0 0 chr10 95940121 95940157 -44376608 - U2 snRNA snRNA -152 36 1 2846 178 114 78 chr10 95940157 95940256 -44376509 - L1MB7 LINE L1 -822 5362 5268 222 226 0 16 chr10 95940409 95940471 -44376294 - L2 LINE L2 -573 2741 2681 325 250 24 12 chr10 95940578 95940662 -44376103 + MLT1A1 LTR MaLR 187 271 -94 667 133 9 0 chr10 95940665 95940770 -44375995 - MLT1A2 LTR MaLR -211 163 58 1153 110 0 0 chr10 95940779 95940934 -44375831 + AluSg/x SINE Alu 152 306 -4 1249 161 0 29 chr10 95941103 95941330 -44375435 + AluJb SINE Alu 86 306 0 570 289 80 19 chr10 95941347 95941758 -44375007 - L1 LINE L1 -1704 4442 4007 27 0 0 0 chr10 95941877 95941904 -44374861 + AT_rich Low_complexity Low_complexity 1 27 0 968 178 0 0 chr10 95941904 95942067 -44374698 + FRAM SINE Alu 1 158 -18 256 288 12 12 chr10 95942082 95942162 -44374603 - MER5A DNA MER1_type -75 114 35 239 264 23 101 chr10 95942252 95942381 -44374384 + MIR SINE MIR 96 214 -48 344 253 39 51 chr10 95943809 95943987 -44372778 - AluSq SINE Alu -19 284 109 394 292 39 62 chr10 95944074 95944379 -44372386 - L1M4 LINE L1 -1487 4659 4362 293 320 144 40 chr10 95944646 95944838 -44371927 - L3b LINE CR1 -30 1553 1322 2072 110 48 0 chr10 95944838 95945129 -44371636 - AluY SINE Alu -6 305 1 293 320 144 40 chr10 95945129 95945214 -44371551 - L3b LINE CR1 -261 1322 1247 685 253 172 5 chr10 95945267 95945465 -44371300 - MIR SINE MIR -13 249 19 250 324 22 89 chr10 95945626 95945851 -44370914 + LTR16B LTR ERVL 38 247 -217 699 174 80 61 chr10 95945963 95946176 -44370589 + L1ME4a LINE L1 5902 6118 -3 361 222 22 0 chr10 95947635 95947725 -44369040 + MIR SINE MIR 70 161 -101 1127 269 106 46 chr10 95948003 95948483 -44368282 - L2 LINE L2 0 3313 2805 1088 140 0 0 chr10 95948602 95948759 -44368006 + AluSg/x SINE Alu 123 279 -31 23 0 0 0 chr10 95948759 95948782 -44367983 + AT_rich Low_complexity Low_complexity 1 23 0 1020 260 180 11 chr10 95948783 95949160 -44367605 - Zaphod DNA AcHobo -3590 441 1 316 59 39 0 chr10 95949480 95949531 -44367234 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 1548 171 47 37 chr10 95949543 95949842 -44366923 + AluJo SINE Alu 1 302 -10 314 244 151 0 chr10 95949928 95950014 -44366751 - MIR SINE MIR -65 143 45 1765 107 172 14 chr10 95950985 95951276 -44365489 + MER1B DNA MER1_type 1 337 0 584 304 79 31 chr10 95951276 95951503 -44365262 + MIR SINE MIR 21 258 -4 1521 140 36 4 chr10 95951600 95951879 -44364886 - AluSx SINE Alu -10 302 15 180 0 0 0 chr10 95952403 95952423 -44364342 + (TCC)n Simple_repeat Simple_repeat 3 22 0 709 109 0 10 chr10 95952431 95952524 -44364241 - AluY SINE Alu -5 306 213 2572 102 14 8 chr10 95952524 95952877 -44363888 - THE1A LTR MaLR 0 355 1 706 138 32 17 chr10 95953062 95953188 -44363577 - MLT1A1 LTR MaLR -70 326 170 1117 211 5 0 chr10 95953188 95953390 -44363375 - Zaphod DNA AcHobo -1301 2730 2528 716 162 110 0 chr10 95953390 95953526 -44363239 + MER33 DNA MER1_type 1 151 -173 300 221 0 29 chr10 95953531 95953599 -44363166 + L1MC4 LINE L1 6638 6703 -1339 2053 126 0 3 chr10 95953608 95953893 -44362872 - AluSx SINE Alu -28 284 1 387 196 116 0 chr10 95953905 95954017 -44362748 + MER33 DNA MER1_type 160 284 -40 252 59 0 0 chr10 95954299 95954333 -44362432 + (GA)n Simple_repeat Simple_repeat 1 34 0 310 318 84 70 chr10 95955000 95955497 -44361268 - L1M2 LINE L1 -5580 1269 766 841 162 27 87 chr10 95956356 95956541 -44360224 - FAM SINE Alu -1 174 1 865 157 41 0 chr10 95956554 95956701 -44360064 - AluJb SINE Alu -15 297 145 1899 78 27 27 chr10 95959064 95959358 -44357407 - AluSx SINE Alu -18 294 1 186 152 0 65 chr10 95959466 95959512 -44357253 + L2 LINE L2 2716 2758 -556 231 267 57 38 chr10 95959529 95959634 -44357131 + MIR SINE MIR 110 216 -46 315 288 106 8 chr10 95959700 95959832 -44356933 - MIR SINE MIR -44 218 74 204 241 86 0 chr10 95959844 95959902 -44356863 - L2 LINE L2 -1 3312 3250 325 296 212 21 chr10 95960035 95960370 -44356395 - L2 LINE L2 -3 3310 2912 319 308 33 0 chr10 95960400 95960491 -44356274 - L2 LINE L2 -519 2795 2702 500 281 121 5 chr10 95960576 95960800 -44355965 + MIR SINE MIR 3 252 -10 295 272 62 0 chr10 95960823 95960904 -44355861 + MIR SINE MIR 74 159 -103 889 250 9 5 chr10 95960941 95961161 -44355604 - MER46C DNA MER2_type -33 305 85 627 172 20 0 chr10 95961168 95961267 -44355498 - FLAM_A SINE Alu -23 119 19 241 264 0 0 chr10 95961282 95961335 -44355430 - MER46C DNA MER2_type -285 53 1 248 286 41 20 chr10 95961336 95961402 -44355363 + MIR SINE MIR 162 232 -30 1568 186 13 33 chr10 95961402 95961542 -44355223 + AluJo SINE Alu 1 142 -170 2425 86 0 0 chr10 95961542 95961844 -44354921 + AluY SINE Alu 1 302 -9 1568 186 13 33 chr10 95961844 95962004 -44354761 + AluJo SINE Alu 142 295 -17 248 286 41 20 chr10 95962004 95962035 -44354730 + MIR SINE MIR 232 261 -1 1993 225 91 51 chr10 95962077 95962535 -44354230 + L1M2 LINE L1 2533 2971 -4595 2038 108 14 0 chr10 95962535 95962812 -44353953 - AluSq SINE Alu -3 310 30 1993 225 91 51 chr10 95962812 95962881 -44353884 + L1M2 LINE L1 2971 3036 -4530 1251 207 134 36 chr10 95962881 95963156 -44353609 - AluJo SINE Alu 0 302 1 1993 225 91 51 chr10 95963156 95963404 -44353361 + L1M2 LINE L1 3036 3320 -4246 639 212 38 30 chr10 95963417 95963549 -44353216 + FLAM_A SINE Alu 1 133 0 1297 147 0 0 chr10 95963665 95963856 -44352909 + AluSg/x SINE Alu 105 295 -15 327 104 143 78 chr10 95963857 95963929 -44352836 - MER104 DNA Tc2 -75 105 29 1157 284 24 41 chr10 95963929 95964348 -44352417 + LTR33 LTR ERVL 1 412 -109 1672 219 91 16 chr10 95964352 95964782 -44351983 - MLT1C LTR MaLR 0 467 6 329 163 175 12 chr10 95964797 95964877 -44351888 + LTR33 LTR ERVL 429 521 0 664 231 120 63 chr10 95964951 95964993 -44351772 - MLT1J LTR MaLR -26 485 447 3277 213 14 15 chr10 95964993 95965647 -44351118 + MER82 DNA MER2_type 1 653 0 664 231 120 63 chr10 95965647 95966023 -44350742 - MLT1J LTR MaLR -64 447 2 191 121 30 0 chr10 95966085 95966118 -44350647 + MIR SINE MIR 43 76 -132 355 233 0 0 chr10 95966120 95966210 -44350555 - L1M4 LINE L1 -3113 3033 2944 2547 65 0 0 chr10 95966223 95966530 -44350235 - AluY SINE Alu -3 308 2 1237 183 110 38 chr10 95966535 95966687 -44350078 - AluJb SINE Alu -1 311 171 2319 94 3 22 chr10 95966687 95967006 -44349759 - AluSq SINE Alu 0 313 1 1940 112 25 0 chr10 95967008 95967284 -44349481 - AluSp SINE Alu -11 302 20 1237 183 110 38 chr10 95967284 95967418 -44349347 - AluJb SINE Alu -141 171 1 2343 100 3 0 chr10 95967436 95967745 -44349020 - AluSg SINE Alu 0 310 1 2453 213 44 17 chr10 95967933 95968529 -44348236 - L1M4 LINE L1 -3207 2939 2328 11231 186 44 38 chr10 95968660 95969271 -44347494 - L1 LINE L1 -773 5373 4767 1811 144 4 4 chr10 95969271 95969541 -44347224 - AluJo SINE Alu -22 290 21 11231 186 44 38 chr10 95969541 95970831 -44345934 - L1 LINE L1 -1379 4767 3487 2491 75 7 0 chr10 95970831 95971139 -44345626 - AluSp SINE Alu -2 311 2 1932 121 0 37 chr10 95971148 95971446 -44345319 - AluSx SINE Alu -23 289 3 11231 186 44 38 chr10 95971446 95972207 -44344558 - L1 LINE L1 -2666 3480 2683 1548 152 3 84 chr10 95973118 95973484 -44343281 - AluSx SINE Alu 0 341 1 1588 162 3 43 chr10 95974466 95974768 -44341997 + AluJo SINE Alu 3 292 -20 297 0 0 0 chr10 95974771 95974804 -44341961 + (TG)n Simple_repeat Simple_repeat 2 34 0 2292 81 0 0 chr10 95975520 95975804 -44340961 + AluSx SINE Alu 17 300 -12 256 294 0 78 chr10 95976283 95976341 -44340424 - MER5B DNA MER1_type -82 96 48 2187 114 0 3 chr10 95976341 95976647 -44340118 + AluSq SINE Alu 1 305 -8 256 294 0 78 chr10 95976647 95976690 -44340075 - MER5B DNA MER1_type -130 48 3 3934 178 53 58 chr10 95977013 95977274 -44339491 - L1MB8 LINE L1 -1 6177 5916 1850 174 57 21 chr10 95977274 95977608 -44339157 + MER7A DNA MER2_type 3 346 0 3934 178 53 58 chr10 95977608 95977753 -44339012 - L1MB8 LINE L1 -262 5916 5772 4604 138 22 6 chr10 95977753 95978477 -44338288 - L1MB2 LINE L1 0 6171 5436 3934 178 53 58 chr10 95978477 95978588 -44338177 - L1MB8 LINE L1 -406 5772 5662 2050 95 4 0 chr10 95978588 95978852 -44337913 + AluSp SINE Alu 40 304 -9 3934 178 53 58 chr10 95978852 95979298 -44337467 - L1MB8 LINE L1 -516 5662 5215 1965 149 3 13 chr10 95979298 95979613 -44337152 - AluSx SINE Alu 0 312 1 3934 178 53 58 chr10 95979613 95980260 -44336505 - L1MB8 LINE L1 -963 5215 4583 1936 133 27 3 chr10 95980600 95980893 -44335872 - AluJo SINE Alu -12 300 1 22 35 0 0 chr10 95980905 95980934 -44335831 + AT_rich Low_complexity Low_complexity 1 29 0 417 129 0 0 chr10 95981878 95981948 -44334817 + (TG)n Simple_repeat Simple_repeat 2 71 0 24 0 0 0 chr10 95983101 95983125 -44333640 + AT_rich Low_complexity Low_complexity 1 24 0 1652 187 53 0 chr10 95983687 95983971 -44332794 + AluJb SINE Alu 5 303 -9 364 83 0 0 chr10 95983971 95984019 -44332746 + MER33 DNA MER1_type 315 362 -1 2926 219 41 65 chr10 95984027 95984368 -44332397 - Zaphod DNA AcHobo -1513 2518 2170 2813 116 24 16 chr10 95984368 95984524 -44332241 + L1PA13 LINE L1 5736 5889 -274 4072 186 39 53 chr10 95984524 95985491 -44331274 - LTR13 LTR ERVK 0 954 1 2813 116 24 16 chr10 95985491 95985757 -44331008 + L1PA13 LINE L1 5889 6161 -2 2926 219 41 65 chr10 95985757 95986344 -44330421 - Zaphod DNA AcHobo -1861 2170 1612 1080 104 0 0 chr10 95986344 95986479 -44330286 + AluSq/x SINE Alu 1 135 -178 2406 61 0 14 chr10 95986479 95986773 -44329992 + AluY SINE Alu 1 290 -21 340 130 29 0 chr10 95986773 95986842 -44329923 + (TA)n Simple_repeat Simple_repeat 2 72 0 243 215 0 43 chr10 95986843 95986936 -44329829 + L1MC4 LINE L1 6615 6703 -1339 * 255 225 22 11 chr10 95986867 95986956 -44329809 - L1MC4 LINE L1 -1339 6703 6614 2189 99 0 7 chr10 95987691 95987985 -44328780 + AluSg SINE Alu 1 292 -18 29 47 0 0 chr10 95988058 95988101 -44328664 + AT_rich Low_complexity Low_complexity 1 43 0 267 277 18 36 chr10 95989255 95989367 -44327398 - MER5A DNA MER1_type -40 149 40 243 0 0 0 chr10 95989891 95989918 -44326847 + (A)n Simple_repeat Simple_repeat 1 27 0 1339 115 0 21 chr10 95990187 95990379 -44326386 - AluSx SINE Alu -122 190 3 393 300 29 29 chr10 95991384 95991524 -44325241 + MIR3 SINE MIR 55 194 -14 374 278 41 0 chr10 95991563 95991732 -44325033 + L1P LINE L1 4962 5137 -1009 647 118 0 0 chr10 95991825 95991918 -44324847 + AluSp/q SINE Alu 216 308 -5 252 0 0 0 chr10 95991920 95991948 -44324817 + (CA)n Simple_repeat Simple_repeat 2 29 0 2217 108 0 3 chr10 95992041 95992348 -44324417 + AluSx SINE Alu 1 306 -6 207 0 0 0 chr10 95993342 95993365 -44323400 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 284 0 28 0 chr10 95993364 95993400 -44323365 + (TA)n Simple_repeat Simple_repeat 2 38 0 193 336 88 36 chr10 95994233 95994370 -44322395 - MIR3 SINE MIR -18 190 47 1715 170 50 16 chr10 95995729 95996052 -44320713 + MER7A DNA MER2_type 14 345 -1 202 216 0 0 chr10 95996631 95996668 -44320097 + CT-rich Low_complexity Low_complexity 4 40 0 25 31 0 0 chr10 95996668 95996700 -44320065 + AT_rich Low_complexity Low_complexity 1 32 0 703 186 103 13 chr10 95996737 95996893 -44319872 - AluJ SINE Alu -14 298 129 1406 38 0 0 chr10 95996898 95997058 -44319707 + AluY SINE Alu 140 299 -12 664 173 0 31 chr10 95997059 95997186 -44319579 - AluJ SINE Alu -185 127 5 794 229 38 33 chr10 95998919 95999129 -44317636 - MER58A DNA MER1_type 0 224 14 2222 87 7 0 chr10 96003956 96004243 -44312522 + AluSp SINE Alu 1 289 -24 925 114 0 30 chr10 96004276 96004408 -44312357 + AluSq/x SINE Alu 9 136 -177 2527 59 0 0 chr10 96004408 96004713 -44312052 + AluY SINE Alu 1 305 -6 2022 138 0 7 chr10 96005355 96005651 -44311114 + AluSx SINE Alu 1 294 -18 1410 249 94 31 chr10 96006642 96007099 -44309666 - MER21B LTR ERV1 -49 814 329 27 0 0 0 chr10 96007243 96007270 -44309495 + AT_rich Low_complexity Low_complexity 1 27 0 406 336 0 8 chr10 96007349 96007468 -44309297 + L2 LINE L2 3194 3311 -2 291 314 118 0 chr10 96007700 96007802 -44308963 - MER102a DNA MER1_type 0 330 217 5618 150 31 18 chr10 96008327 96009322 -44307443 - L1MC2 LINE L1 -14 6330 5323 966 175 61 79 chr10 96009322 96009551 -44307214 - AluJo SINE Alu -6 306 82 404 58 58 0 chr10 96009551 96009620 -44307145 - L1M LINE L1 -1014 5330 5258 1992 136 10 0 chr10 96010135 96010429 -44306336 + AluSx SINE Alu 1 297 -15 2159 129 28 25 chr10 96010781 96011144 -44305621 - THE1B LTR MaLR 0 364 1 2363 90 3 0 chr10 96011923 96012224 -44304541 - AluSp SINE Alu -11 302 1 902 237 92 25 chr10 96013158 96013474 -44303291 + MER46C DNA MER2_type 1 337 -1 215 275 14 29 chr10 96013690 96013759 -44303006 + MIR SINE MIR 48 115 -147 341 231 308 0 chr10 96013944 96014074 -44302691 - MIR SINE MIR 0 262 93 2834 7 0 0 chr10 96014074 96014380 -44302385 + AluYa5 SINE Alu 1 306 -5 2046 135 0 7 chr10 96015022 96015318 -44301447 + AluSx SINE Alu 1 294 -18 2456 234 78 55 chr10 96016309 96017086 -44299679 - MER21B LTR ERV1 -49 814 20 403 289 114 71 chr10 96017224 96017618 -44299147 - L2 LINE L2 -9 3263 2853 3583 104 52 4 chr10 96017743 96018303 -44298462 - L1MC1 LINE L1 -377 5956 5370 1633 161 36 15 chr10 96018303 96018632 -44298133 - L1MC1 LINE L1 -8 6325 5990 3490 127 23 3 chr10 96019275 96019843 -44296922 - L1PA13 LINE L1 0 6163 5585 247 225 14 42 chr10 96020338 96020409 -44296356 + Charlie4 DNA MER1_type 1888 1956 -5 314 299 52 0 chr10 96025444 96025458 -44291307 - L1MA10 LINE L1 0 6334 6321 3108 221 66 25 chr10 96025458 96026856 -44289909 - L1ME2 LINE L1 -11 6153 4702 2453 74 0 0 chr10 96027653 96027949 -44288816 + AluY SINE Alu 1 296 -15 314 164 0 0 chr10 96028867 96028928 -44287837 + L1MB7 LINE L1 6115 6175 -9 255 61 0 0 chr10 96029038 96029071 -44287694 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2222 87 7 0 chr10 96030962 96031249 -44285516 + AluSp SINE Alu 1 289 -24 1879 136 0 40 chr10 96031282 96031414 -44285351 + AluSx SINE Alu 9 145 -167 2302 80 0 0 chr10 96031414 96031701 -44285064 + AluY SINE Alu 1 287 -24 411 38 0 0 chr10 96031701 96031754 -44285011 + (TA)n Simple_repeat Simple_repeat 2 54 0 1879 136 0 40 chr10 96031754 96031922 -44284843 + AluSx SINE Alu 143 298 -14 1857 151 3 17 chr10 96031928 96032226 -44284539 + AluJb SINE Alu 1 294 -18 260 87 0 0 chr10 96032244 96032290 -44284475 + LTR66 LTR ERVL 394 439 -171 435 230 163 51 chr10 96033112 96033290 -44283475 - L1 LINE L1 -1158 4988 4791 23 33 0 0 chr10 96033634 96033664 -44283101 + AT_rich Low_complexity Low_complexity 1 30 0 2012 109 50 3 chr10 96034477 96034760 -44282005 + AluSx SINE Alu 1 296 -16 181 214 54 71 chr10 96035467 96035523 -44281242 - MIR SINE MIR -95 113 59 2379 88 0 3 chr10 96035841 96036148 -44280617 + AluSg SINE Alu 1 306 -4 1870 127 9 67 chr10 96038273 96038604 -44278161 + AluSx SINE Alu 1 312 0 1486 143 45 66 chr10 96039071 96039214 -44277551 - L1ME1 LINE L1 -315 5851 5707 2160 115 0 38 chr10 96039214 96039527 -44277238 + AluSx SINE Alu 1 301 -11 1486 143 45 66 chr10 96039527 96039718 -44277047 - L1ME1 LINE L1 -459 5707 5524 2215 85 7 7 chr10 96039845 96040138 -44276627 - AluSp SINE Alu -19 294 2 242 172 35 0 chr10 96040280 96040338 -44276427 + L1ME3 LINE L1 5910 5969 -193 287 250 103 78 chr10 96040362 96040566 -44276199 + L1ME3 LINE L1 5962 6162 0 2023 107 21 3 chr10 96041000 96041290 -44275475 - AluSq SINE Alu -8 305 11 2852 248 79 39 chr10 96041402 96042277 -44274488 + L1MEc LINE L1 11 850 -5546 787 196 0 0 chr10 96042277 96042410 -44274355 + FLAM_C SINE Alu 1 133 0 2852 248 79 39 chr10 96042410 96042431 -44274334 + L1MEc LINE L1 850 869 -5527 198 0 0 0 chr10 96042431 96042453 -44274312 + (CA)n Simple_repeat Simple_repeat 2 23 0 2852 248 79 39 chr10 96042453 96042645 -44274120 + L1MEc LINE L1 869 1143 -5253 22 0 0 0 chr10 96043289 96043311 -44273454 + AT_rich Low_complexity Low_complexity 1 22 0 2352 78 7 0 chr10 96043313 96043607 -44273158 + AluSg SINE Alu 1 296 -14 4651 145 55 24 chr10 96043639 96044690 -44272075 - L1MA9 LINE L1 -106 6206 5131 991 164 69 5 chr10 96044694 96044883 -44271882 - MER46A DNA MER2_type -3 233 33 1802 166 0 10 chr10 96044911 96045207 -44271558 - AluJo SINE Alu -19 293 1 3516 121 40 113 chr10 96045211 96046061 -44270704 - L1MA9 LINE L1 -1016 5130 4343 2877 139 132 95 chr10 96046059 96046295 -44270470 - Charlie1a DNA MER1_type -1327 1434 1208 * 1576 139 16 23 chr10 96046295 96046553 -44270212 - AluJo SINE Alu -2 310 55 2877 139 132 95 chr10 96046553 96047259 -44269506 - Charlie1a DNA MER1_type -1553 1208 458 1058 221 90 62 chr10 96047519 96047647 -44269118 - Charlie1a DNA MER1_type -2355 406 283 2048 115 13 26 chr10 96047647 96047959 -44268806 - AluSx SINE Alu -4 308 1 1058 221 90 62 chr10 96047959 96048220 -44268545 - Charlie1a DNA MER1_type -2478 283 6 1794 172 0 17 chr10 96048783 96049085 -44267680 - AluJo SINE Alu -15 297 1 708 213 0 0 chr10 96049991 96050118 -44266647 + FLAM_A SINE Alu 1 127 -6 26 64 0 0 chr10 96050397 96050444 -44266321 + AT_rich Low_complexity Low_complexity 1 47 0 232 77 77 26 chr10 96050445 96050484 -44266281 - MIR SINE MIR -18 244 204 501 266 107 24 chr10 96050563 96050732 -44266033 - MIR SINE MIR -78 184 2 342 285 129 71 chr10 96050821 96051270 -44265495 - MLT1K LTR MaLR -51 537 63 23 33 0 0 chr10 96051592 96051622 -44265143 + AT_rich Low_complexity Low_complexity 1 30 0 217 47 47 23 chr10 96051856 96051899 -44264866 + (TTTTTA)n Simple_repeat Simple_repeat 2 45 0 397 294 105 49 chr10 96052053 96052339 -44264426 + L3 LINE CR1 975 1276 -301 2155 117 0 23 chr10 96052603 96052910 -44263855 + AluSx SINE Alu 1 300 -12 267 54 0 0 chr10 96053199 96053236 -44263529 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2195 86 7 0 chr10 96053236 96053516 -44263249 - AluSq SINE Alu -31 282 1 27 29 0 0 chr10 96054049 96054083 -44262682 + AT_rich Low_complexity Low_complexity 1 34 0 191 259 37 67 chr10 96055154 96055289 -44261476 + MER5B DNA MER1_type 32 162 -16 234 0 0 0 chr10 96057409 96057435 -44259330 + (TC)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr10 96057434 96057455 -44259310 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 21 71 0 0 chr10 96057912 96057954 -44258811 + AT_rich Low_complexity Low_complexity 1 42 0 183 129 0 0 chr10 96058252 96058283 -44258482 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 96058989 96059011 -44257754 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 96061105 96061125 -44255640 + (TAA)n Simple_repeat Simple_repeat 2 21 0 324 211 187 73 chr10 96061618 96061741 -44255024 + MIR SINE MIR 11 147 -115 2310 78 3 50 chr10 96062404 96062577 -44254188 - AluSx SINE Alu -7 305 152 2667 52 0 0 chr10 96062577 96062886 -44253879 - AluY SINE Alu -1 310 2 2310 78 3 50 chr10 96062886 96063032 -44253733 - AluSx SINE Alu -160 152 1 617 114 0 9 chr10 96063032 96063137 -44253628 - L1M4 LINE L1 -727 5451 5348 662 227 0 0 chr10 96063217 96063349 -44253416 + FLAM_A SINE Alu 1 132 -1 500 249 63 95 chr10 96063349 96063476 -44253289 + L1MC4a LINE L1 5387 5516 -605 2151 96 0 58 chr10 96063476 96063788 -44252977 - AluSq SINE Alu -19 294 1 500 249 63 95 chr10 96063788 96064109 -44252656 + L1MC4a LINE L1 5516 5819 -302 1640 158 83 0 chr10 96064803 96065068 -44251697 + AluJb SINE Alu 1 287 -25 831 183 14 58 chr10 96065363 96065571 -44251194 + L1MA1 LINE L1 18 216 -7349 6018 168 43 3 chr10 96065574 96067235 -44249530 + L1MA1 LINE L1 390 2219 -5346 3231 171 69 63 chr10 96067224 96067309 -44249456 + L1MA1 LINE L1 3789 3872 -3693 * 2043 118 3 14 chr10 96067309 96067598 -44249167 + AluSx SINE Alu 1 286 -26 540 45 0 0 chr10 96067598 96067665 -44249100 + (CATA)n Simple_repeat Simple_repeat 2 68 0 3231 171 69 63 chr10 96067665 96068104 -44248661 + L1MA1 LINE L1 3872 4324 -3241 2235 113 7 7 chr10 96068104 96068413 -44248352 + AluSq SINE Alu 5 313 0 3231 171 69 63 chr10 96068413 96068804 -44247961 + L1MA1 LINE L1 4324 4711 -2854 1786 85 17 0 chr10 96068804 96069039 -44247726 + AluSg SINE Alu 60 298 -12 607 139 0 0 chr10 96069042 96069143 -44247622 + L1MA1 LINE L1 5279 5379 -2186 1912 140 32 7 chr10 96069143 96069422 -44247343 + AluSx SINE Alu 1 286 -26 6827 88 31 20 chr10 96069423 96070205 -44246560 + L1MA1 LINE L1 6393 7199 -522 2355 110 0 0 chr10 96070205 96070506 -44246259 + AluSq SINE Alu 1 301 -12 6827 88 31 20 chr10 96070506 96071017 -44245748 + L1MA1 LINE L1 7199 7703 -18 274 137 0 78 chr10 96071017 96071028 -44245737 + AluSg/x SINE Alu 126 136 -166 2116 141 3 13 chr10 96071028 96071334 -44245431 + AluSx SINE Alu 1 303 -9 274 137 0 78 chr10 96071334 96071373 -44245392 + AluSg/x SINE Alu 136 172 -130 2345 82 0 3 chr10 96072553 96072847 -44243918 + AluSc SINE Alu 1 293 -16 183 294 203 25 chr10 96072870 96073033 -44243732 + L3 LINE CR1 667 858 -719 372 294 68 7 chr10 96073586 96073732 -44243033 + L3 LINE CR1 962 1116 -461 2161 126 0 19 chr10 96074274 96074591 -44242174 - AluSx SINE Alu -1 311 1 1727 183 0 10 chr10 96074882 96075177 -44241588 + AluJb SINE Alu 1 292 -20 472 202 101 0 chr10 96075360 96075449 -44241316 + FLAM_A SINE Alu 2 99 -43 312 137 0 0 chr10 96075455 96075506 -44241259 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2268 111 0 16 chr10 96075833 96076149 -44240616 + AluSx SINE Alu 1 311 -1 62 14 0 0 chr10 96076149 96076218 -44240547 + AT_rich Low_complexity Low_complexity 1 69 0 2342 98 3 0 chr10 96076289 96076596 -44240169 + AluSp SINE Alu 1 308 -5 2392 93 3 0 chr10 96076607 96076919 -44239846 + AluSp SINE Alu 1 313 0 2125 123 0 3 chr10 96078486 96078770 -44237995 - AluSx SINE Alu -24 288 6 412 229 83 7 chr10 96079250 96079394 -44237371 - MER103 DNA DNA -2 164 10 24 32 0 0 chr10 96079399 96079430 -44237335 + AT_rich Low_complexity Low_complexity 1 31 0 2080 151 3 0 chr10 96079565 96079877 -44236888 + AluSq SINE Alu 1 313 0 306 0 0 0 chr10 96080140 96080174 -44236591 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 328 16 33 chr10 96080194 96080255 -44236510 - MIR SINE MIR -133 75 16 2231 90 0 17 chr10 96080517 96080816 -44235949 + AluSg SINE Alu 3 296 -14 392 252 157 0 chr10 96082570 96082729 -44234036 - L1M4 LINE L1 -1172 4974 4791 23 33 0 0 chr10 96083073 96083103 -44233662 + AT_rich Low_complexity Low_complexity 1 30 0 2068 110 50 0 chr10 96083916 96084198 -44232567 + AluSx SINE Alu 1 296 -16 186 214 54 71 chr10 96084905 96084961 -44231804 - MIR SINE MIR -95 113 59 2397 88 0 3 chr10 96085279 96085586 -44231179 + AluSg SINE Alu 1 306 -4 1908 127 9 67 chr10 96087711 96088042 -44228723 + AluSx SINE Alu 1 312 0 1387 146 45 66 chr10 96088510 96088653 -44228112 - L1ME1 LINE L1 -315 5851 5707 2168 119 0 39 chr10 96088653 96088965 -44227800 + AluSx SINE Alu 1 300 -12 1387 146 45 66 chr10 96088965 96089156 -44227609 - L1ME1 LINE L1 -459 5707 5524 2359 65 7 7 chr10 96089283 96089577 -44227188 - AluSq SINE Alu -19 294 1 2059 130 0 3 chr10 96089676 96089987 -44226778 - AluSx SINE Alu 0 310 1 231 254 0 0 chr10 96090961 96091016 -44225749 + (TG)n Simple_repeat Simple_repeat 2 56 0 697 185 134 6 chr10 96091339 96091496 -44225269 + MER69A DNA AcHobo 1 177 0 30 27 0 0 chr10 96092010 96092047 -44224718 + AT_rich Low_complexity Low_complexity 1 37 0 21 21 0 64 chr10 96092222 96092269 -44224496 + AT_rich Low_complexity Low_complexity 1 44 0 188 332 251 40 chr10 96092701 96092948 -44223817 + L2 LINE L2 2964 3262 -10 29 28 0 0 chr10 96093002 96093038 -44223727 + AT_rich Low_complexity Low_complexity 1 36 0 205 186 0 23 chr10 96093259 96093302 -44223463 + GA-rich Low_complexity Low_complexity 1 42 0 1741 155 17 7 chr10 96094286 96094576 -44222189 - AluJo SINE Alu -19 293 1 331 219 146 10 chr10 96094693 96094789 -44221976 - MIR SINE MIR -79 183 75 1380 140 166 0 chr10 96094821 96095092 -44221673 - MER7A DNA MER2_type -31 315 2 2034 144 14 0 chr10 96096534 96096825 -44219940 - AluSx SINE Alu -17 295 1 21 36 0 0 chr10 96096977 96097005 -44219760 + AT_rich Low_complexity Low_complexity 1 28 0 690 279 176 37 chr10 96097066 96097446 -44219319 - L2 LINE L2 -5 3308 2876 216 0 0 0 chr10 96097555 96097579 -44219186 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1559 184 25 7 chr10 96097584 96097861 -44218904 - AluJo SINE Alu -30 282 1 218 313 27 45 chr10 96098059 96098141 -44218624 + MER5A DNA MER1_type 72 153 -36 2182 103 10 0 chr10 96098141 96098431 -44218334 - AluSx SINE Alu -19 293 1 218 313 27 45 chr10 96098431 96098460 -44218305 + MER5A DNA MER1_type 153 181 -8 218 259 103 52 chr10 96098502 96098618 -44218147 - L2 LINE L2 -30 3242 3121 340 295 18 36 chr10 96098669 96098781 -44217984 - L2 LINE L2 -244 3028 2919 1159 193 57 7 chr10 96099130 96099410 -44217355 - L1MB4 LINE L1 -8 6408 6115 2501 176 23 35 chr10 96099420 96099942 -44216823 - L1MB4 LINE L1 -387 6029 5518 824 138 15 0 chr10 96099942 96100072 -44216693 - FLAM_C SINE Alu -1 132 1 2501 176 23 35 chr10 96100072 96100177 -44216588 - L1MB4 LINE L1 -898 5518 5413 553 196 131 0 chr10 96100171 96100324 -44216441 - L1MB4 LINE L1 -4825 1559 1387 * 25 0 0 0 chr10 96100369 96100394 -44216371 + AT_rich Low_complexity Low_complexity 1 25 0 652 319 158 21 chr10 96101222 96101587 -44215178 + L3 LINE CR1 673 1119 -458 2420 81 0 10 chr10 96101587 96101894 -44214871 - AluY SINE Alu -7 304 1 652 319 158 21 chr10 96101894 96102004 -44214761 + L3 LINE CR1 1119 1213 -364 1690 196 17 3 chr10 96102472 96102768 -44213997 - AluJo SINE Alu -12 300 1 1442 211 58 0 chr10 96102999 96103307 -44213458 - MER68 LTR ERV1 -206 356 31 2045 128 14 0 chr10 96103456 96103744 -44213021 + AluSx SINE Alu 1 292 -20 1476 138 9 9 chr10 96103762 96103986 -44212779 - AluSx SINE Alu -88 224 1 192 174 87 43 chr10 96104107 96104153 -44212612 - MIR SINE MIR -12 250 203 866 134 0 16 chr10 96104453 96104580 -44212185 + FLAM_C SINE Alu 1 125 -8 21 0 0 0 chr10 96105485 96105506 -44211259 + AT_rich Low_complexity Low_complexity 1 21 0 2306 101 3 16 chr10 96105576 96105883 -44210882 + AluSx SINE Alu 1 303 -9 435 280 30 48 chr10 96106707 96106875 -44209890 + MIR3 SINE MIR 35 199 -9 276 279 254 50 chr10 96107445 96107646 -44209119 + MIR SINE MIR 21 262 0 257 318 53 33 chr10 96107660 96107811 -44208954 + L3 LINE CR1 722 875 -702 749 287 105 34 chr10 96107830 96108154 -44208611 + L3 LINE CR1 988 1334 -243 710 238 63 43 chr10 96108175 96108524 -44208241 + L1MC4 LINE L1 7687 8042 0 22 0 0 0 chr10 96108652 96108674 -44208091 + AT_rich Low_complexity Low_complexity 1 22 0 273 266 16 31 chr10 96109881 96110009 -44206756 + (TATATG)n Simple_repeat Simple_repeat 5 130 0 1356 175 143 4 chr10 96111508 96111760 -44205005 + AluJo SINE Alu 1 287 -25 2197 110 13 3 chr10 96111907 96112217 -44204548 - AluSq SINE Alu 0 313 1 377 288 50 73 chr10 96112909 96113038 -44203727 + L2 LINE L2 2456 2579 -735 4572 55 2 9 chr10 96113038 96113605 -44203160 + LTR6A LTR ERV1 1 563 -1 377 288 50 73 chr10 96113605 96113694 -44203071 + L2 LINE L2 2579 2669 -645 300 314 64 32 chr10 96113701 96113857 -44202908 + L2 LINE L2 2772 2932 -382 636 229 59 76 chr10 96113902 96114138 -44202627 - L2 LINE L2 -907 2407 2176 211 192 0 77 chr10 96114337 96114389 -44202376 - L2 LINE L2 -6 3266 3219 240 256 73 77 chr10 96114434 96114531 -44202234 + L1M4 LINE L1 2322 2418 -3728 2029 133 0 7 chr10 96114531 96114833 -44201932 + AluSx SINE Alu 4 303 -9 240 256 73 77 chr10 96114833 96114981 -44201784 + L1M4 LINE L1 2418 2566 -3580 2177 114 7 3 chr10 96115129 96115427 -44201338 - AluSq SINE Alu -14 299 1 262 202 67 76 chr10 96115434 96115553 -44201212 + L1M4 LINE L1 2663 2780 -3366 297 251 110 18 chr10 96115574 96115737 -44201028 + L1M4 LINE L1 4113 4290 -1856 256 165 176 0 chr10 96115761 96115852 -44200913 + L1M4 LINE L1 4422 4528 -1618 22 56 0 0 chr10 96115872 96115908 -44200857 + AT_rich Low_complexity Low_complexity 1 36 0 1744 245 210 5 chr10 96115925 96117011 -44199754 + L1MC2 LINE L1 2310 3653 -2493 2112 98 6 64 chr10 96117047 96117375 -44199390 - AluSx SINE Alu -3 309 1 2712 165 108 18 chr10 96117383 96117994 -44198771 + MER44D DNA MER2_type 40 705 0 407 133 72 0 chr10 96118004 96118087 -44198678 + L1MC2 LINE L1 3651 3739 -2407 * 3594 161 68 86 chr10 96118060 96118213 -44198552 + L1MC2 LINE L1 5000 5154 -1190 1716 120 117 18 chr10 96118213 96118487 -44198278 + AluSx SINE Alu 1 301 -11 3594 161 68 86 chr10 96118487 96119557 -44197208 + L1MC2 LINE L1 5154 6206 -138 385 138 53 53 chr10 96119603 96119697 -44197068 + L1MC2 LINE L1 6199 6292 -52 433 49 0 30 chr10 96119747 96119973 -44196792 + AluY SINE Alu 1 299 -11 1949 137 44 3 chr10 96119987 96120280 -44196485 + AluSx SINE Alu 6 310 -2 3075 166 73 10 chr10 96120292 96120979 -44195786 + L1MD1 LINE L1 5304 6033 -209 2084 137 0 0 chr10 96121746 96122038 -44194727 + AluJb SINE Alu 1 292 -20 265 290 48 100 chr10 96122142 96122373 -44194392 - L2 LINE L2 -77 3195 2977 634 287 162 68 chr10 96122399 96123246 -44193519 + L2 LINE L2 2348 3256 -16 2476 53 0 23 chr10 96123475 96123779 -44192986 - AluY SINE Alu -14 297 1 22 35 0 0 chr10 96124119 96124148 -44192617 + AT_rich Low_complexity Low_complexity 1 29 0 309 308 58 25 chr10 96124317 96124437 -44192328 + L2 LINE L2 3144 3267 -5 2178 129 7 0 chr10 96124950 96125259 -44191506 - AluSx SINE Alu -1 311 1 2418 75 0 0 chr10 96125425 96125720 -44191045 + AluY SINE Alu 1 295 -16 279 0 0 0 chr10 96125913 96125944 -44190821 + (CA)n Simple_repeat Simple_repeat 2 32 0 275 200 27 0 chr10 96126682 96126757 -44190008 + (TA)n Simple_repeat Simple_repeat 2 78 0 1986 107 38 34 chr10 96126987 96127278 -44189487 - AluSx SINE Alu -20 292 1 1168 136 68 0 chr10 96127331 96127522 -44189243 - MER2 DNA MER2_type -141 204 1 2080 130 3 10 chr10 96127765 96128064 -44188701 + AluSx SINE Alu 1 297 -15 664 243 141 54 chr10 96128130 96128443 -44188322 - MER102b DNA MER1_type -1 340 1 316 242 50 50 chr10 96128883 96128982 -44187783 - MER103 DNA DNA -19 147 49 2321 104 3 0 chr10 96128983 96129290 -44187475 + AluSq SINE Alu 1 308 -5 2407 90 3 0 chr10 96129301 96129613 -44187152 + AluSp SINE Alu 1 313 0 2125 123 0 3 chr10 96131180 96131464 -44185301 - AluSx SINE Alu -24 288 6 381 248 76 7 chr10 96131944 96132089 -44184676 - MER103 DNA DNA -2 164 10 24 32 0 0 chr10 96132094 96132125 -44184640 + AT_rich Low_complexity Low_complexity 1 31 0 2080 151 3 0 chr10 96132260 96132572 -44184193 + AluSq SINE Alu 1 313 0 342 0 0 0 chr10 96132836 96132874 -44183891 + (CA)n Simple_repeat Simple_repeat 2 39 0 186 328 16 33 chr10 96132894 96132955 -44183810 - MIR SINE MIR -133 75 16 2231 90 0 17 chr10 96133217 96133516 -44183249 + AluSg SINE Alu 3 296 -14 328 321 52 16 chr10 96134300 96134440 -44182325 - MIR SINE MIR -74 134 16 1938 147 33 3 chr10 96134804 96135104 -44181661 - AluJo SINE Alu -3 309 1 740 149 0 0 chr10 96135137 96135244 -44181521 + AluSq/x SINE Alu 1 107 -205 1319 143 11 114 chr10 96135244 96135517 -44181248 - AluJo SINE Alu -52 260 16 275 341 54 8 chr10 96135561 96135690 -44181075 + MIR3 SINE MIR 63 197 -11 24 32 0 0 chr10 96135850 96135881 -44180884 + AT_rich Low_complexity Low_complexity 1 31 0 818 156 0 8 chr10 96135883 96136011 -44180754 - FLAM_C SINE Alu -6 127 1 563 330 70 54 chr10 96136062 96136667 -44180098 - L2 LINE L2 -3 3269 2596 198 133 0 0 chr10 96136748 96136778 -44179987 - L2 LINE L2 -21 3251 3222 534 146 23 62 chr10 96137215 96137345 -44179420 + L1MB8 LINE L1 6053 6177 -1 1611 174 10 40 chr10 96138181 96138479 -44178286 - AluJo SINE Alu -23 289 1 399 179 12 54 chr10 96138520 96138688 -44178077 + GA-rich Low_complexity Low_complexity 5 165 0 1583 178 87 7 chr10 96139240 96139515 -44177250 + AluJb SINE Alu 1 297 -15 235 242 0 11 chr10 96139515 96139606 -44177159 + G-rich Low_complexity Low_complexity 1 90 0 294 308 97 42 chr10 96139864 96140037 -44176728 - MIR SINE MIR -79 183 3 22 35 0 0 chr10 96140079 96140108 -44176657 + AT_rich Low_complexity Low_complexity 1 29 0 238 296 154 43 chr10 96140177 96140339 -44176426 - MIR SINE MIR -71 191 12 309 308 58 25 chr10 96141026 96141146 -44175619 - L2 LINE L2 -5 3267 3144 22 35 0 0 chr10 96141315 96141344 -44175421 + AT_rich Low_complexity Low_complexity 1 29 0 2436 59 0 23 chr10 96141684 96141988 -44174777 + AluY SINE Alu 1 297 -14 2291 72 3 23 chr10 96142360 96142664 -44174101 - AluY SINE Alu -13 298 1 315 0 0 0 chr10 96144030 96144065 -44172700 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2184 86 22 4 chr10 96144067 96144345 -44172420 - AluSx SINE Alu -29 283 1 2053 85 64 0 chr10 96145668 96145951 -44170814 + AluY SINE Alu 2 302 -9 2399 64 0 0 chr10 96146335 96146644 -44170121 - AluY SINE Alu 0 309 1 2354 109 0 3 chr10 96147362 96147675 -44169090 - AluSx SINE Alu 0 312 1 234 284 149 21 chr10 96148293 96148434 -44168331 + MIR SINE MIR 94 252 -10 1529 123 9 5 chr10 96149991 96150210 -44166555 - AluJb SINE Alu -10 302 83 197 231 0 0 chr10 96150827 96150866 -44165899 + L2 LINE L2 3262 3300 -13 2222 101 7 0 chr10 96151270 96151558 -44165207 + AluSg SINE Alu 1 290 -20 2181 106 0 3 chr10 96152024 96152331 -44164434 + AluSx SINE Alu 1 306 0 2190 119 10 0 chr10 96154263 96154566 -44162199 + AluSx SINE Alu 1 306 -6 2005 129 10 3 chr10 96155272 96155567 -44161198 - AluSq SINE Alu -16 297 1 2090 134 3 0 chr10 96155614 96155920 -44160845 - AluSq SINE Alu -6 307 1 2408 78 0 0 chr10 96156086 96156381 -44160384 + AluY SINE Alu 1 295 -16 297 0 0 0 chr10 96156574 96156607 -44160158 + (CA)n Simple_repeat Simple_repeat 2 34 0 195 169 42 0 chr10 96157348 96157419 -44159346 + (TA)n Simple_repeat Simple_repeat 1 74 0 1256 192 149 45 chr10 96157586 96157649 -44159116 - MER2 DNA MER2_type -5 340 285 1982 107 38 34 chr10 96157649 96157940 -44158825 - AluSx SINE Alu -20 292 1 1256 192 149 45 chr10 96157940 96158184 -44158581 - MER2 DNA MER2_type -60 285 1 2070 130 3 10 chr10 96158427 96158726 -44158039 + AluSx SINE Alu 1 297 -15 788 243 141 54 chr10 96158792 96159105 -44157660 - MER102b DNA MER1_type -1 340 1 471 200 19 119 chr10 96159545 96159645 -44157120 - MER103 DNA DNA -19 147 67 2354 106 3 0 chr10 96159645 96159957 -44156808 + AluSp SINE Alu 1 313 0 471 200 19 119 chr10 96159957 96160016 -44156749 - MER103 DNA DNA -99 67 4 1766 89 38 4 chr10 96160084 96160320 -44156445 - AluSp SINE Alu -23 290 47 2387 109 0 0 chr10 96160525 96160837 -44155928 - AluSx SINE Alu 0 312 1 445 162 0 0 chr10 96160981 96161049 -44155716 - AluJo SINE Alu -7 305 238 1140 163 0 0 chr10 96161051 96161217 -44155548 - AluJo SINE Alu -146 166 1 2074 107 20 33 chr10 96161337 96161637 -44155128 + AluSq SINE Alu 1 296 -17 1347 183 118 15 chr10 96161645 96161907 -44154858 + AluJo SINE Alu 1 289 -23 2368 94 0 7 chr10 96162032 96162341 -44154424 - AluSp SINE Alu -6 307 1 2539 62 0 0 chr10 96162352 96162656 -44154109 - AluY SINE Alu -7 304 1 2268 110 0 3 chr10 96163390 96163691 -44153074 + AluSx SINE Alu 1 300 -12 366 329 68 14 chr10 96164650 96164796 -44151969 + L2 LINE L2 3119 3272 0 285 257 129 7 chr10 96165092 96165232 -44151533 - MIR SINE MIR -10 252 96 316 222 14 0 chr10 96165817 96165889 -44150876 + MER103 DNA DNA 26 98 -68 2374 75 3 16 chr10 96166145 96166451 -44150314 - AluY SINE Alu -9 302 1 1006 151 12 24 chr10 96166664 96166830 -44149935 - FRAM SINE Alu -2 164 1 226 359 46 62 chr10 96167087 96167346 -44149419 + L2 LINE L2 2808 3062 -210 1105 120 24 0 chr10 96167481 96167648 -44149117 - AluSg/x SINE Alu -8 302 132 2221 132 0 0 chr10 96167648 96167958 -44148807 - AluSx SINE Alu -2 310 1 198 250 67 0 chr10 96168224 96168284 -44148481 - L2 LINE L2 -219 3053 2990 2420 106 0 0 chr10 96168298 96168655 -44148110 + AluSx SINE Alu 1 357 0 2282 95 7 0 chr10 96171022 96171317 -44145448 - AluY SINE Alu -14 297 1 374 321 24 36 chr10 96171738 96171903 -44144862 - MIR SINE MIR -48 214 52 1199 181 195 0 chr10 96173319 96173601 -44143164 + L1MB7 LINE L1 5835 6171 -13 2207 94 3 44 chr10 96173892 96174210 -44142555 - AluSx SINE Alu -7 305 1 217 333 0 0 chr10 96176244 96176304 -44140461 + MIR SINE MIR 30 89 -119 813 282 39 13 chr10 96176314 96176548 -44140217 - MIR SINE MIR -2 260 21 27 0 0 0 chr10 96176803 96176830 -44139935 + GC_rich Low_complexity Low_complexity 1 27 0 1873 134 0 0 chr10 96176942 96177217 -44139548 - AluSg SINE Alu -35 275 1 34 0 0 0 chr10 96178017 96178051 -44138714 + AT_rich Low_complexity Low_complexity 1 34 0 2466 80 0 0 chr10 96178787 96179087 -44137678 - AluSg1 SINE Alu -9 300 1 2521 63 0 3 chr10 96179090 96179393 -44137372 - AluY SINE Alu -7 304 3 740 234 62 31 chr10 96179562 96179788 -44136977 - MIR SINE MIR -4 258 26 216 0 0 0 chr10 96179889 96179913 -44136852 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 2249 96 0 0 chr10 96179915 96180197 -44136568 - AluSq SINE Alu -31 282 1 455 230 82 15 chr10 96180287 96180422 -44136343 + L1MC4 LINE L1 7512 7655 -387 1174 38 0 0 chr10 96181739 96181870 -44134895 + AluY SINE Alu 2 132 -179 1031 70 0 8 chr10 96181895 96182023 -44134742 + AluY SINE Alu 2 128 -183 285 51 0 0 chr10 96182023 96182062 -44134703 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2381 81 7 0 chr10 96182068 96182377 -44134388 + AluY SINE Alu 1 311 0 2265 115 0 0 chr10 96182471 96182766 -44133999 - AluSx SINE Alu -17 295 1 2341 88 0 7 chr10 96182776 96183073 -44133692 - AluSc SINE Alu -14 295 1 221 102 68 0 chr10 96183104 96183163 -44133602 + (TA)n Simple_repeat Simple_repeat 2 64 0 459 231 19 0 chr10 96183198 96183318 -44133447 + L1MC4 LINE L1 7880 7995 0 213 333 0 0 chr10 96183800 96183860 -44132905 - L2 LINE L2 -40 3232 3173 202 345 73 18 chr10 96184506 96184616 -44132149 - L2 LINE L2 -213 3059 2944 476 273 71 49 chr10 96185176 96185400 -44131365 - MIR SINE MIR -15 247 12 204 40 0 0 chr10 96186201 96186226 -44130539 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1994 144 0 10 chr10 96187490 96187789 -44128976 - AluJb SINE Alu -16 296 1 322 227 101 67 chr10 96188563 96188682 -44128083 + MIR3 SINE MIR 81 203 -5 435 274 99 25 chr10 96188722 96188923 -44127842 - L2 LINE L2 0 3313 3098 732 139 113 17 chr10 96188932 96189047 -44127718 + FLAM_C SINE Alu 2 127 -16 420 267 115 63 chr10 96189105 96189159 -44127606 - L2 LINE L2 -284 3029 2979 1908 156 0 10 chr10 96189159 96189467 -44127298 + AluSx SINE Alu 1 305 -7 420 267 115 63 chr10 96189467 96189603 -44127162 - L2 LINE L2 -334 2979 2829 1051 142 178 10 chr10 96189991 96190188 -44126577 + MER30 DNA MER1_type 1 230 0 6118 96 26 10 chr10 96190249 96191226 -44125539 + L1PA13 LINE L1 5128 6117 -46 1661 170 34 17 chr10 96191531 96191825 -44124940 + AluJo SINE Alu 7 305 -7 394 311 83 16 chr10 96191901 96192157 -44124608 + L2 LINE L2 2952 3185 -87 391 350 124 28 chr10 96193098 96193535 -44123230 + L3 LINE CR1 1022 1500 -77 280 193 0 18 chr10 96193576 96193633 -44123132 - MER58 DNA MER1_type -114 101 46 1090 189 76 18 chr10 96193659 96193934 -44122831 - MER33 DNA MER1_type -1 323 33 22903 57 5 0 chr10 96194379 96197939 -44118826 + L1PA6 LINE L1 2585 6154 0 1546 159 15 38 chr10 96197934 96197987 -44118778 + L1MA3 LINE L1 5002 5055 -1091 189 0 0 0 chr10 96197987 96198008 -44118757 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1546 159 15 38 chr10 96198008 96198294 -44118471 + L1MA3 LINE L1 5055 5333 -813 2384 94 0 0 chr10 96198326 96198624 -44118141 - AluSg SINE Alu -12 298 1 2320 80 3 10 chr10 96199482 96199783 -44116982 + AluY SINE Alu 1 299 -12 5783 102 7 29 chr10 96200294 96200761 -44116004 + L1MA3 LINE L1 5324 5761 -544 2246 122 3 0 chr10 96200761 96201073 -44115692 + AluSp SINE Alu 1 313 0 5783 102 7 29 chr10 96201073 96201558 -44115207 + L1MA3 LINE L1 5761 6255 -50 2320 98 3 0 chr10 96201558 96201854 -44114911 + AluSg SINE Alu 1 297 -13 7879 16 0 0 chr10 96201854 96203409 -44113356 + L1PA3 LINE L1 4598 6154 -1 2580 55 0 0 chr10 96203502 96203813 -44112952 + AluY SINE Alu 1 311 0 253 240 93 0 chr10 96205852 96205927 -44110838 - L2 LINE L2 0 3313 3232 1970 152 23 0 chr10 96206028 96206330 -44110435 - AluJo SINE Alu -3 309 1 601 281 92 16 chr10 96206373 96206558 -44110207 + MIR SINE MIR 22 220 -42 2259 93 0 20 chr10 96207116 96207417 -44109348 + AluSq SINE Alu 5 299 -14 2084 137 0 0 chr10 96208939 96209231 -44107534 + AluJb SINE Alu 1 292 -20 252 299 48 100 chr10 96209335 96209566 -44107199 - L2 LINE L2 -77 3195 2977 634 287 162 68 chr10 96209592 96210439 -44106326 + L2 LINE L2 2348 3256 -16 2185 134 0 0 chr10 96210668 96210966 -44105799 - AluSx SINE Alu -14 298 1 471 285 44 15 chr10 96211509 96211646 -44105119 + MER5A DNA MER1_type 49 189 0 908 118 0 15 chr10 96212022 96212157 -44104608 - FLAM_C SINE Alu 0 133 1 241 215 248 66 chr10 96213186 96213307 -44103458 + MIR3 SINE MIR 33 175 -33 945 326 83 37 chr10 96213360 96213976 -44102789 + L2 LINE L2 2296 2939 -375 1048 157 27 17 chr10 96214007 96214239 -44102526 - L1MB8 LINE L1 -118 6053 5820 416 219 65 24 chr10 96214296 96214465 -44102300 + L1MC5 LINE L1 7750 7925 -36 187 224 56 39 chr10 96214473 96214620 -44102145 + L2 LINE L2 2988 3198 -115 2227 106 17 0 chr10 96215269 96215571 -44101194 + AluSx SINE Alu 1 307 -5 2058 138 21 0 chr10 96216698 96216988 -44099777 + AluSx SINE Alu 1 296 -16 205 186 0 23 chr10 96217431 96217474 -44099291 + CT-rich Low_complexity Low_complexity 1 42 0 29 28 0 0 chr10 96217695 96217731 -44099034 + AT_rich Low_complexity Low_complexity 1 36 0 188 332 251 40 chr10 96217785 96218032 -44098733 - L2 LINE L2 -10 3262 2964 21 21 0 64 chr10 96218464 96218511 -44098254 + AT_rich Low_complexity Low_complexity 1 44 0 30 27 0 0 chr10 96218686 96218723 -44098042 + AT_rich Low_complexity Low_complexity 1 37 0 697 185 134 6 chr10 96219237 96219394 -44097371 - MER69A DNA AcHobo 0 177 1 231 254 0 0 chr10 96219717 96219772 -44096993 + (CA)n Simple_repeat Simple_repeat 2 56 0 2060 130 0 3 chr10 96220745 96221056 -44095709 + AluSx SINE Alu 1 310 0 2407 104 0 0 chr10 96221155 96221464 -44095301 + AluSx SINE Alu 1 309 -3 2303 87 7 13 chr10 96221710 96222010 -44094755 - AluSx SINE Alu -14 298 1 1455 158 73 0 chr10 96222662 96222909 -44093856 - AluSx SINE Alu -19 293 29 2236 102 0 34 chr10 96223014 96223336 -44093429 - AluSq SINE Alu 0 313 3 238 259 0 0 chr10 96223411 96223465 -44093300 - MIR SINE MIR -10 252 199 1968 111 8 0 chr10 96223465 96223726 -44093039 - AluSg SINE Alu -47 263 1 579 237 32 13 chr10 96223989 96224145 -44092620 + L1ME3A LINE L1 5961 6119 -51 1700 152 48 3 chr10 96224611 96224921 -44091844 - L1MC1 LINE L1 0 6333 6010 2103 86 4 0 chr10 96224923 96225191 -44091574 + AluSq SINE Alu 6 274 -39 213 39 0 0 chr10 96225647 96225673 -44091092 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 661 219 186 14 chr10 96225860 96226070 -44090695 - MIR SINE MIR 0 262 17 1389 228 71 18 chr10 96226073 96226468 -44090297 - L1ME1 LINE L1 -12 6154 5739 13126 136 32 34 chr10 96226726 96226931 -44089834 - Tigger1 DNA MER2_type 0 2418 2214 899 182 6 18 chr10 96226931 96227096 -44089669 + FRAM SINE Alu 1 163 -3 13126 136 32 34 chr10 96227096 96227868 -44088897 - Tigger1 DNA MER2_type -204 2214 1442 2457 95 0 0 chr10 96227868 96228174 -44088591 - AluSx SINE Alu -6 306 1 13126 136 32 34 chr10 96228174 96229394 -44087371 - Tigger1 DNA MER2_type -976 1442 220 2083 114 0 7 chr10 96229394 96229699 -44087066 + AluSx SINE Alu 5 307 0 13126 136 32 34 chr10 96229699 96229918 -44086847 - Tigger1 DNA MER2_type -2198 220 2 2533 92 2 72 chr10 96230237 96230557 -44086208 + THE1C LTR MaLR 1 342 -33 2335 112 0 3 chr10 96230557 96230862 -44085903 - AluSq SINE Alu -9 304 1 2533 92 2 72 chr10 96230862 96230902 -44085863 + THE1C LTR MaLR 342 334 -41 2343 113 0 0 chr10 96230902 96231204 -44085561 - AluSq SINE Alu -11 302 1 2533 92 2 72 chr10 96231204 96231245 -44085520 + THE1C LTR MaLR 333 375 0 186 299 195 0 chr10 96231425 96231502 -44085263 - L3 LINE CR1 -165 1412 1321 314 232 16 16 chr10 96232375 96232500 -44084265 + GA-rich Low_complexity Low_complexity 1 125 0 226 307 168 30 chr10 96233209 96233310 -44083455 + MER5B DNA MER1_type 64 178 0 2204 102 0 3 chr10 96233387 96233681 -44083084 - AluSx SINE Alu -19 293 1 770 191 0 0 chr10 96233779 96233905 -44082860 + FLAM_C SINE Alu 1 126 -7 26 0 0 0 chr10 96233905 96233931 -44082834 + AT_rich Low_complexity Low_complexity 1 26 0 321 247 0 27 chr10 96233936 96234009 -44082756 - MIR SINE MIR -157 105 35 404 113 0 28 chr10 96234399 96234470 -44082295 + L1PA16 LINE L1 6094 6162 -4 266 324 46 19 chr10 96234816 96234924 -44081841 - L2 LINE L2 -22 3291 3181 328 304 26 17 chr10 96235414 96235529 -44081236 + MIR3 SINE MIR 65 180 -28 231 276 26 43 chr10 96236723 96236839 -44079926 - MIR SINE MIR -58 204 91 1266 183 91 16 chr10 96236948 96237338 -44079427 - L1ME2 LINE L1 -198 5966 5528 1975 146 0 3 chr10 96237573 96237860 -44078905 + AluSx SINE Alu 1 286 -26 21 0 0 0 chr10 96238077 96238098 -44078667 + AT_rich Low_complexity Low_complexity 1 21 0 388 240 124 24 chr10 96238109 96238251 -44078514 - MIR SINE MIR -62 146 4 1111 134 115 14 chr10 96238615 96238824 -44077941 - MER30 DNA MER1_type 0 230 1 2272 108 0 0 chr10 96239927 96240223 -44076542 - AluSx SINE Alu -15 297 2 842 182 0 0 chr10 96240324 96240456 -44076309 + FLAM_C SINE Alu 1 132 -11 879 166 226 6 chr10 96242232 96242413 -44074352 - MER58A DNA MER1_type 0 224 4 903 197 56 0 chr10 96242423 96242601 -44074164 - MER5A DNA MER1_type 0 189 2 21 0 0 0 chr10 96242786 96242807 -44073958 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 96243133 96243156 -44073609 + (A)n Simple_repeat Simple_repeat 1 23 0 710 198 84 20 chr10 96243406 96243608 -44073157 + MER58C DNA MER1_type 1 215 0 2389 96 0 0 chr10 96244309 96244610 -44072155 + AluSx SINE Alu 1 301 -11 190 316 70 0 chr10 96245809 96245866 -44070899 + L3b LINE CR1 1197 1257 -326 2117 103 0 7 chr10 96246088 96246391 -44070374 + AluSc SINE Alu 1 301 0 325 193 219 17 chr10 96246534 96246653 -44070112 - L1ME4a LINE L1 -4 6117 5975 289 295 11 32 chr10 96247724 96247819 -44068946 + MIR SINE MIR 47 139 -123 1639 151 0 60 chr10 96247861 96248159 -44068606 + AluJb SINE Alu 7 286 -26 2266 107 0 0 chr10 96248202 96248500 -44068265 - AluSx SINE Alu -14 298 1 1906 167 3 3 chr10 96249679 96249991 -44066774 + AluJb SINE Alu 1 312 0 288 0 0 0 chr10 96250086 96250118 -44066647 + (A)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr10 96250180 96250201 -44066564 + AT_rich Low_complexity Low_complexity 1 21 0 2288 100 3 3 chr10 96250205 96250514 -44066251 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 96250921 96250942 -44065823 + AT_rich Low_complexity Low_complexity 1 21 0 392 262 121 27 chr10 96251205 96251354 -44065411 - MIR SINE MIR -71 191 29 829 70 9 17 chr10 96251464 96251579 -44065186 - AluSc SINE Alu -3 306 193 2189 110 3 0 chr10 96251762 96252061 -44064704 + AluSq SINE Alu 1 300 -13 2402 103 3 0 chr10 96252149 96252461 -44064304 + AluSp SINE Alu 1 313 0 311 260 162 19 chr10 96252578 96252732 -44064033 + L1ME LINE L1 5603 5778 -343 1743 129 118 0 chr10 96252895 96253175 -44063590 + AluSq SINE Alu 1 313 0 184 247 117 0 chr10 96253198 96253275 -44063490 + L2 LINE L2 1345 1430 -1884 220 309 41 32 chr10 96253672 96253795 -44062970 - L3b LINE CR1 -205 1378 1255 201 74 0 0 chr10 96254536 96254563 -44062202 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 869 114 0 0 chr10 96254563 96254677 -44062088 - FLAM_C SINE Alu -23 120 7 2155 118 0 0 chr10 96254711 96254990 -44061775 + AluSx SINE Alu 17 295 -17 1298 152 48 35 chr10 96255230 96255461 -44061304 - AluJo SINE Alu -19 293 60 2513 78 0 0 chr10 96255555 96255861 -44060904 - AluY SINE Alu -5 306 1 2086 122 3 10 chr10 96255925 96256221 -44060544 + AluSc SINE Alu 1 294 -15 2461 50 7 10 chr10 96256525 96256812 -44059953 + AluY SINE Alu 1 288 -23 327 49 0 0 chr10 96256812 96256853 -44059912 + (CA)n Simple_repeat Simple_repeat 2 42 0 227 291 63 0 chr10 96257505 96257584 -44059181 - MIR SINE MIR -71 191 108 259 247 26 39 chr10 96257813 96257890 -44058875 - MER5A DNA MER1_type -1 188 113 250 280 11 54 chr10 96257815 96257908 -44058857 + MER5A DNA MER1_type 18 106 -83 * 418 264 93 21 chr10 96258111 96258251 -44058514 + MIR SINE MIR 1 150 -112 2254 85 3 7 chr10 96258254 96258548 -44058217 + AluSc SINE Alu 3 295 -14 1190 123 0 0 chr10 96258548 96258710 -44058055 + AluSg/x SINE Alu 134 295 -17 691 260 121 22 chr10 96259470 96259593 -44057172 - MIR SINE MIR 0 262 153 2196 116 3 0 chr10 96259593 96259896 -44056869 + AluSg SINE Alu 2 305 -5 691 260 121 22 chr10 96259896 96259995 -44056770 - MIR SINE MIR -109 153 18 497 268 121 11 chr10 96260408 96260598 -44056167 - MIR SINE MIR -28 234 24 2479 73 3 0 chr10 96260875 96261176 -44055589 + AluSp SINE Alu 1 302 -11 2127 106 38 0 chr10 96261176 96261468 -44055297 + AluSg SINE Alu 1 303 -7 261 0 0 0 chr10 96261661 96261690 -44055075 + (GA)n Simple_repeat Simple_repeat 2 30 0 326 278 229 14 chr10 96261749 96261972 -44054793 - L3b LINE CR1 -81 1502 1232 2598 52 3 3 chr10 96262028 96262335 -44054430 + AluSp SINE Alu 1 307 -6 2098 113 0 0 chr10 96263011 96263322 -44053443 + AluSx SINE Alu 1 311 0 476 341 52 0 chr10 96263624 96263759 -44053006 + L2 LINE L2 3116 3257 -15 1775 174 14 74 chr10 96263810 96264242 -44052523 + L1ME1 LINE L1 5423 5828 -338 39 0 0 0 chr10 96264271 96264310 -44052455 + AT_rich Low_complexity Low_complexity 1 39 0 1601 198 30 28 chr10 96264310 96264674 -44052091 + L1MB7 LINE L1 5815 6179 -5 2278 97 0 13 chr10 96264697 96265006 -44051759 - AluY SINE Alu -6 305 1 1032 156 0 0 chr10 96265114 96265294 -44051471 + (TA)n Simple_repeat Simple_repeat 1 180 0 1267 104 0 23 chr10 96265310 96265483 -44051282 - AluSq SINE Alu -140 173 5 2062 124 0 0 chr10 96266602 96266884 -44049881 - AluSg1 SINE Alu -8 301 20 259 197 213 0 chr10 96267011 96267072 -44049693 + HAL1 LINE L1 2386 2459 -48 439 281 14 14 chr10 96267081 96267220 -44049545 - MIR SINE MIR -4 258 120 2399 102 3 0 chr10 96267236 96267541 -44049224 - AluSx SINE Alu -6 306 1 2265 88 17 3 chr10 96267842 96268138 -44048627 - AluSp SINE Alu -13 300 1 745 203 139 0 chr10 96268200 96268358 -44048407 - AluJo SINE Alu -13 299 120 1967 158 10 0 chr10 96268744 96269048 -44047717 - AluJb SINE Alu -5 307 1 440 197 53 30 chr10 96269240 96269355 -44047410 + MIR SINE MIR 110 230 -32 2165 116 0 3 chr10 96269355 96269657 -44047108 + AluSc SINE Alu 1 301 -8 440 197 53 30 chr10 96269657 96269673 -44047092 + MIR SINE MIR 230 244 -18 2049 141 0 7 chr10 96270349 96270653 -44046112 - AluSx SINE Alu -2 310 9 2235 116 0 7 chr10 96271008 96271318 -44045447 + AluSq SINE Alu 1 308 -5 2094 100 7 17 chr10 96271438 96271729 -44045036 + AluSg SINE Alu 15 302 -8 463 245 0 10 chr10 96271963 96272065 -44044700 + MIR SINE MIR 91 191 -71 2138 89 7 46 chr10 96272521 96272825 -44043940 + AluSx SINE Alu 1 292 -20 2318 95 0 20 chr10 96273302 96273608 -44043157 - AluSx SINE Alu -12 300 1 2122 104 3 45 chr10 96273637 96273946 -44042819 - AluSq SINE Alu -17 296 1 424 174 0 0 chr10 96273973 96274042 -44042723 - AluSq SINE Alu -9 304 236 1851 122 8 0 chr10 96274067 96274314 -44042451 - AluSq SINE Alu -64 249 1 1356 129 25 0 chr10 96274322 96274553 -44042212 + MER33 DNA MER1_type 1 234 -90 904 140 0 7 chr10 96274553 96274689 -44042076 + AluJo SINE Alu 1 135 -177 497 133 51 0 chr10 96274689 96274787 -44041978 + MER33 DNA MER1_type 261 363 0 491 187 70 117 chr10 96274922 96275093 -44041672 + MER110 LTR ERV1 322 484 -7 1562 146 38 118 chr10 96275849 96276246 -44040519 + MLT1A1 LTR MaLR 1 365 0 2181 118 0 10 chr10 96276254 96276551 -44040214 - AluSx SINE Alu -18 294 1 2090 145 3 0 chr10 96276610 96276913 -44039852 - AluSx SINE Alu -8 304 1 2236 113 0 3 chr10 96276917 96277217 -44039548 - AluSg SINE Alu -11 299 1 2158 107 3 3 chr10 96277217 96277506 -44039259 - AluSg SINE Alu -20 290 1 * 2410 91 0 3 chr10 96277505 96277813 -44038952 - AluSc SINE Alu -2 307 1 24 32 0 0 chr10 96277887 96277918 -44038847 + AT_rich Low_complexity Low_complexity 1 31 0 1061 113 0 0 chr10 96277921 96278062 -44038703 + AluSc SINE Alu 1 141 -168 1339 122 0 0 chr10 96278811 96279000 -44037765 + AluSc SINE Alu 119 307 -2 225 0 0 0 chr10 96279014 96279039 -44037726 + (CA)n Simple_repeat Simple_repeat 2 26 0 2433 91 0 0 chr10 96279245 96279553 -44037212 + AluSp SINE Alu 1 308 -5 1370 207 30 8 chr10 96279617 96279883 -44036882 + AluJb SINE Alu 17 288 -24 2233 108 0 10 chr10 96279892 96280221 -44036544 + AluSg SINE Alu 1 310 0 665 170 0 18 chr10 96280574 96280686 -44036079 - AluJb SINE Alu -7 305 196 1959 129 25 0 chr10 96281641 96281927 -44034838 + AluSx SINE Alu 1 293 -19 2063 139 0 0 chr10 96282976 96283271 -44033494 + AluSx SINE Alu 1 295 -17 827 185 7 7 chr10 96283332 96283483 -44033282 + MLT1A1 LTR MaLR 1 151 -214 673 167 0 0 chr10 96283486 96283588 -44033177 + FLAM_A SINE Alu 20 121 -21 897 189 6 25 chr10 96283629 96283788 -44032977 + MLT1A1 LTR MaLR 167 322 -43 902 150 0 14 chr10 96283960 96284100 -44032665 - FLAM_C SINE Alu -3 140 3 225 313 0 0 chr10 96284417 96284481 -44032284 - Charlie4 DNA MER1_type -6 1955 1892 340 282 0 0 chr10 96285224 96285309 -44031456 + L2 LINE L2 2430 2514 -800 2206 104 6 38 chr10 96285329 96285515 -44031250 - AluSx SINE Alu 0 312 139 2209 95 0 57 chr10 96285515 96285830 -44030935 - AluSg SINE Alu -13 297 1 2206 104 6 38 chr10 96285830 96285961 -44030804 - AluSx SINE Alu -173 139 5 226 275 127 112 chr10 96286054 96286330 -44030435 + L2 LINE L2 2686 2965 -349 1651 151 85 18 chr10 96286352 96286624 -44030141 + AluJo SINE Alu 1 290 -22 209 138 50 0 chr10 96286625 96286705 -44030060 + (TA)n Simple_repeat Simple_repeat 1 84 0 2387 104 0 0 chr10 96286731 96287038 -44029727 - AluSc SINE Alu -2 307 1 705 223 23 0 chr10 96287156 96287286 -44029479 + FLAM_A SINE Alu 1 133 0 417 254 146 57 chr10 96287363 96287582 -44029183 + L1ME4a LINE L1 5776 6033 -88 2280 90 0 0 chr10 96287582 96287872 -44028893 + AluSg SINE Alu 1 290 -20 417 254 146 57 chr10 96287872 96287967 -44028798 + L1ME4a LINE L1 6033 6118 -3 298 253 102 110 chr10 96288291 96288655 -44028110 - L2 LINE L2 -7 3306 2946 2588 36 7 3 chr10 96289350 96289656 -44027109 - AluY SINE Alu -4 307 1 2095 122 7 3 chr10 96289658 96289953 -44026812 - AluSx SINE Alu -16 296 1 25 23 0 23 chr10 96290464 96290484 -44026281 + AT_rich Low_complexity Low_complexity 1 20 -22 2417 82 0 0 chr10 96290484 96290777 -44025988 - AluSg SINE Alu -17 293 1 25 23 0 23 chr10 96290777 96290799 -44025966 + AT_rich Low_complexity Low_complexity 20 42 0 1750 167 0 33 chr10 96290799 96291099 -44025666 - AluJo SINE Alu -22 290 1 2297 93 0 3 chr10 96291528 96291828 -44024937 + AluSp SINE Alu 1 299 -14 257 167 167 0 chr10 96291911 96291965 -44024800 - L2 LINE L2 -1 3312 3250 25 0 0 0 chr10 96292227 96292252 -44024513 + AT_rich Low_complexity Low_complexity 1 25 0 227 209 154 36 chr10 96293290 96293400 -44023365 - MIR3 SINE MIR -54 154 32 2260 92 0 0 chr10 96293477 96293785 -44022980 - AluSx SINE Alu 0 308 1 2303 101 0 7 chr10 96293819 96294117 -44022648 - AluSq SINE Alu -14 299 4 2287 98 0 3 chr10 96294242 96294539 -44022226 + AluSg SINE Alu 1 296 -14 1871 147 19 26 chr10 96295012 96295319 -44021446 + AluSx SINE Alu 1 305 -7 2183 115 7 0 chr10 96295594 96295890 -44020875 + AluSg SINE Alu 2 299 -11 389 258 98 111 chr10 96296284 96296412 -44020353 + MIR SINE MIR 1 126 -136 2168 108 7 10 chr10 96296412 96296718 -44020047 + AluSg SINE Alu 1 305 -5 389 258 98 111 chr10 96296718 96296833 -44019932 + MIR SINE MIR 126 241 -21 1840 135 4 0 chr10 96296963 96297223 -44019542 + AluSx SINE Alu 35 295 -17 699 295 55 17 chr10 96297283 96297520 -44019245 - MIR SINE MIR 0 262 17 324 273 0 50 chr10 96297534 96297633 -44019132 + MIR3 SINE MIR 87 180 -28 430 125 0 91 chr10 96297703 96297791 -44018974 + MADE1 DNA Mariner 1 80 0 321 276 0 67 chr10 96298031 96298136 -44018629 + MIR3 SINE MIR 73 170 -38 2250 80 0 4 chr10 96298231 96298507 -44018258 + AluSq SINE Alu 1 275 -38 180 0 0 0 chr10 96298512 96298532 -44018233 + (CA)n Simple_repeat Simple_repeat 1 20 0 385 311 146 52 chr10 96301354 96301853 -44014912 - L1M2 LINE L1 -5518 1331 786 231 36 0 0 chr10 96302040 96302068 -44014697 + (CTG)n Simple_repeat Simple_repeat 1 28 0 222 37 0 0 chr10 96304793 96304820 -44011945 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 22 0 0 0 chr10 96305475 96305497 -44011268 + AT_rich Low_complexity Low_complexity 1 22 0 2326 89 0 0 chr10 96305831 96306123 -44010642 + AluSx SINE Alu 2 293 -19 2286 95 0 0 chr10 96306207 96306502 -44010263 - AluY SINE Alu -16 295 1 2410 99 0 0 chr10 96306899 96307201 -44009564 - AluSg SINE Alu -8 302 1 2168 114 0 3 chr10 96307520 96307817 -44008948 + AluSx SINE Alu 1 296 -16 2555 51 3 6 chr10 96307819 96308131 -44008634 + AluY SINE Alu 1 311 0 2256 95 0 3 chr10 96308277 96308573 -44008192 - AluY SINE Alu -16 295 1 2003 149 3 7 chr10 96308975 96309146 -44007619 - AluSx SINE Alu -4 308 138 225 0 0 0 chr10 96309146 96309171 -44007594 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 2077 96 4 0 chr10 96309172 96309442 -44007323 - AluSp SINE Alu -22 291 21 2003 149 3 7 chr10 96309442 96309577 -44007188 - AluSx SINE Alu -173 139 1 686 149 0 0 chr10 96309648 96309755 -44007010 - AluSg/x SINE Alu 0 309 203 2151 126 17 56 chr10 96309825 96310182 -44006583 + MER2 DNA MER2_type 2 344 0 399 281 54 38 chr10 96310521 96310655 -44006110 + L2 LINE L2 1860 1990 -1324 4602 146 114 81 chr10 96310655 96310862 -44005903 + Tigger3b DNA MER2_type 1 200 -2828 2363 87 0 7 chr10 96310862 96311160 -44005605 + AluSc SINE Alu 1 296 -13 4602 146 114 81 chr10 96311160 96311503 -44005262 + Tigger3b DNA MER2_type 200 530 -2498 2035 119 0 7 chr10 96311503 96311788 -44004977 + AluSx SINE Alu 1 283 -29 4602 146 114 81 chr10 96311788 96311858 -44004907 + Tigger3b DNA MER2_type 530 596 -2432 2297 68 3 7 chr10 96311858 96312153 -44004612 - AluY SINE Alu -17 294 1 4602 146 114 81 chr10 96312153 96312454 -44004311 + Tigger3b DNA MER2_type 596 886 -2142 1766 123 0 120 chr10 96312454 96312796 -44003969 - AluSx SINE Alu -11 301 1 4602 146 114 81 chr10 96312796 96313063 -44003702 + Tigger3b DNA MER2_type 886 1231 0 399 281 54 38 chr10 96313063 96313113 -44003652 + L2 LINE L2 1990 2047 -1267 245 0 89 0 chr10 96313131 96313176 -44003589 + CT-rich Low_complexity Low_complexity 2 50 0 609 274 31 42 chr10 96313213 96313501 -44003264 + L1ME3A LINE L1 4774 5058 -1088 1191 130 0 0 chr10 96313560 96313729 -44003036 + AluSg/x SINE Alu 135 303 -7 1665 198 109 57 chr10 96313776 96314374 -44002391 + L1ME3A LINE L1 5208 5822 -348 25 0 0 0 chr10 96314385 96314410 -44002355 + AT_rich Low_complexity Low_complexity 1 25 0 1213 126 0 11 chr10 96314410 96314585 -44002180 - AluJb SINE Alu -139 173 1 285 266 55 64 chr10 96314587 96314696 -44002069 + L1ME3A LINE L1 5826 5933 -237 628 110 0 0 chr10 96314697 96314779 -44001986 - FRAM SINE Alu -20 156 75 453 213 55 132 chr10 96314791 96314945 -44001820 + L1ME3A LINE L1 5944 6075 -95 2477 87 0 0 chr10 96314945 96315254 -44001511 + AluSc SINE Alu 1 309 0 453 213 55 132 chr10 96315254 96315334 -44001431 + L1ME3A LINE L1 6075 6160 -10 1025 163 12 6 chr10 96315348 96315514 -44001251 + AluJo SINE Alu 123 289 -23 1863 189 0 0 chr10 96315712 96316008 -44000757 + AluJb SINE Alu 1 296 -16 687 199 66 42 chr10 96316422 96316588 -44000177 - FAM SINE Alu -5 170 1 220 234 0 0 chr10 96316591 96316638 -44000127 + T-rich Low_complexity Low_complexity 1 47 0 639 259 0 0 chr10 96316640 96316771 -43999994 - FLAM_C SINE Alu 0 133 3 287 245 0 113 chr10 96317075 96317181 -43999584 + L2 LINE L2 1812 1905 -1409 1035 197 93 58 chr10 96317270 96317529 -43999236 + MLT1E2 LTR MaLR 387 626 0 348 358 110 24 chr10 96317767 96318150 -43998615 + L2 LINE L2 2365 2780 -534 2385 84 10 0 chr10 96318152 96318450 -43998315 - AluSc SINE Alu -8 301 1 237 314 220 0 chr10 96318618 96318736 -43998029 + L2 LINE L2 3117 3260 -12 332 248 68 75 chr10 96318976 96319063 -43997702 - L1ME LINE L1 -455 5666 5579 1835 151 17 3 chr10 96319063 96319355 -43997410 - AluJb SINE Alu -11 301 6 332 248 68 75 chr10 96319355 96319400 -43997365 - L1ME LINE L1 -542 5579 5535 2314 113 0 0 chr10 96319494 96319795 -43996970 - AluSq SINE Alu -12 301 1 2278 110 0 7 chr10 96319855 96320165 -43996600 - AluSx SINE Alu -4 308 1 486 0 0 0 chr10 96320391 96320445 -43996320 + (TA)n Simple_repeat Simple_repeat 2 55 0 24 32 0 0 chr10 96320493 96320524 -43996241 + AT_rich Low_complexity Low_complexity 1 31 0 1367 134 0 5 chr10 96320529 96320723 -43996042 - AluY SINE Alu -118 193 1 2302 115 7 0 chr10 96320724 96321028 -43995737 - AluSx SINE Alu -6 306 1 2409 81 3 0 chr10 96321085 96321382 -43995383 + AluSp SINE Alu 1 298 -15 537 328 73 22 chr10 96321564 96321796 -43994969 - MIR SINE MIR -6 256 13 2390 93 0 0 chr10 96322034 96322335 -43994430 + AluSq SINE Alu 1 301 -12 2183 117 0 13 chr10 96322365 96322674 -43994091 - AluSx SINE Alu -7 305 1 600 323 5 53 chr10 96323063 96323200 -43993565 + MER91A DNA MER1_type 16 144 -52 2088 119 3 3 chr10 96323200 96323514 -43993251 - AluSx SINE Alu 0 314 1 600 323 5 53 chr10 96323514 96323564 -43993201 + MER91A DNA MER1_type 144 195 -1 277 255 156 10 chr10 96323571 96323678 -43993087 - MIR SINE MIR -62 146 37 236 395 0 0 chr10 96324028 96324104 -43992661 + MIR SINE MIR 20 95 -167 721 253 109 9 chr10 96324108 96324329 -43992436 - MIR SINE MIR 0 262 20 839 128 0 0 chr10 96324330 96324447 -43992318 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr10 96324447 96324482 -43992283 + AT_rich Low_complexity Low_complexity 1 35 0 185 197 91 45 chr10 96324488 96324554 -43992211 + MIR SINE MIR 96 164 -98 466 191 9 78 chr10 96324591 96324706 -43992059 - AluJ SINE Alu -22 290 184 895 139 0 0 chr10 96324706 96324835 -43991930 - AluJ SINE Alu -183 129 1 1946 146 0 10 chr10 96324842 96325144 -43991621 - AluSx SINE Alu -13 299 1 787 182 8 0 chr10 96325468 96325589 -43991176 - FLAM_C SINE Alu -20 123 2 568 261 29 48 chr10 96325658 96325812 -43990953 - MIR SINE MIR -1 261 112 2278 118 3 0 chr10 96325812 96326116 -43990649 + AluSx SINE Alu 1 305 -7 568 261 29 48 chr10 96326116 96326171 -43990594 - MIR SINE MIR -150 112 57 1367 78 0 0 chr10 96326332 96326499 -43990266 + AluSg/x SINE Alu 134 300 -12 448 173 173 36 chr10 96326535 96326645 -43990120 + FLAM_C SINE Alu 1 125 -8 2106 103 24 0 chr10 96326650 96326940 -43989825 + AluSx SINE Alu 1 297 -15 2163 100 30 0 chr10 96327240 96327540 -43989225 + AluSq SINE Alu 1 309 -4 2794 137 28 21 chr10 96327584 96328009 -43988756 + MSTC LTR MaLR 1 428 0 280 268 116 121 chr10 96328241 96328517 -43988248 - L2 LINE L2 0 3313 3038 2396 85 0 0 chr10 96328517 96328812 -43987953 + AluSq SINE Alu 1 295 -18 280 268 116 121 chr10 96328812 96328931 -43987834 - L2 LINE L2 -275 3038 2920 735 210 74 11 chr10 96328946 96329122 -43987643 - MER58C DNA MER1_type -2 213 27 727 282 117 30 chr10 96329140 96329473 -43987292 - L2 LINE L2 -407 2907 2546 2085 97 10 0 chr10 96329591 96329879 -43986886 - AluSc SINE Alu -18 291 1 866 177 0 0 chr10 96330113 96330243 -43986522 + FLAM_C SINE Alu 3 132 -1 758 319 74 32 chr10 96330614 96331018 -43985747 - LTR16A LTR ERVL -6 444 24 2191 119 0 0 chr10 96331330 96331623 -43985142 - AluSx SINE Alu -19 293 1 225 317 117 95 chr10 96331841 96332261 -43984504 - L2 LINE L2 -3 3269 2841 2030 139 0 23 chr10 96332325 96332635 -43984130 - AluJb SINE Alu -9 303 1 2172 111 0 20 chr10 96332660 96332966 -43983799 + AluSx SINE Alu 1 300 -12 3629 164 76 146 chr10 96332970 96333914 -43982851 - L1MC4a LINE L1 0 7808 6885 547 143 82 0 chr10 96333914 96334012 -43982753 - HY1 scRNA scRNA -1 111 6 3629 164 76 146 chr10 96334012 96334345 -43982420 - L1MC4a LINE L1 -923 6885 6530 645 196 0 45 chr10 96334355 96334488 -43982277 - L2 LINE L2 -1 3312 3186 317 284 9 115 chr10 96334564 96334912 -43981853 - L2 LINE L2 -561 2753 2443 22 35 0 0 chr10 96334942 96334971 -43981794 + AT_rich Low_complexity Low_complexity 1 29 0 329 302 7 50 chr10 96335027 96335166 -43981599 + L2 LINE L2 3179 3311 -2 359 308 184 5 chr10 96335827 96336012 -43980753 + MIR SINE MIR 32 249 -13 298 284 83 9 chr10 96336206 96336315 -43980450 + L2 LINE L2 3194 3310 -3 1935 137 55 0 chr10 96336324 96336616 -43980149 + AluSx SINE Alu 1 308 -4 252 250 42 21 chr10 96336825 96336913 -43979852 + LTR67 LTR ERVL 428 517 -40 994 178 46 0 chr10 96336913 96337087 -43979678 - MER20 DNA MER1_type -2 217 36 5643 171 68 52 chr10 96337293 96337603 -43979162 - L1MB8 LINE L1 -5 6173 5869 2551 71 0 0 chr10 96337603 96337912 -43978853 - AluY SINE Alu -1 310 2 5643 171 68 52 chr10 96337912 96338031 -43978734 - L1MB8 LINE L1 -309 5869 5753 2487 96 0 0 chr10 96338031 96338344 -43978421 - AluSq SINE Alu 0 313 1 5643 171 68 52 chr10 96338344 96339374 -43977391 - L1MB8 LINE L1 -425 5753 4741 2166 116 0 0 chr10 96339374 96339668 -43977097 + AluSx SINE Alu 1 294 -18 2352 84 0 10 chr10 96339668 96339966 -43976799 + AluSg1 SINE Alu 1 295 -14 5643 171 68 52 chr10 96339966 96340364 -43976401 - L1MB8 LINE L1 -1437 4741 4286 2403 93 0 0 chr10 96340364 96340664 -43976101 - AluSc SINE Alu -9 300 1 5643 171 68 52 chr10 96340664 96340988 -43975777 - L1MB8 LINE L1 -1892 4286 3969 1623 158 0 33 chr10 96341525 96341798 -43974967 + AluSx SINE Alu 41 304 -8 299 64 0 21 chr10 96341798 96341826 -43974939 + (GA)n Simple_repeat Simple_repeat 1 29 -17 2190 110 10 10 chr10 96341826 96342134 -43974631 + AluSq SINE Alu 1 308 -5 299 64 0 21 chr10 96342134 96342152 -43974613 + (GA)n Simple_repeat Simple_repeat 29 46 0 1109 188 0 5 chr10 96342206 96342392 -43974373 + AluJb SINE Alu 3 187 -125 218 192 0 0 chr10 96342420 96342472 -43974293 + A-rich Low_complexity Low_complexity 1 52 0 2441 91 0 3 chr10 96342516 96342824 -43973941 - AluSx SINE Alu -4 308 2 352 113 88 38 chr10 96342824 96342904 -43973861 - L1M LINE L1 -782 5402 5319 288 143 0 0 chr10 96342896 96342945 -43973820 + L1M LINE L1 5310 5358 -976 * 239 138 0 52 chr10 96342945 96343003 -43973762 - L1M LINE L1 -976 5358 5304 721 164 17 0 chr10 96343042 96343158 -43973607 - FLAM_C SINE Alu -15 118 1 488 247 20 20 chr10 96343158 96343304 -43973461 - L1M4 LINE L1 -846 5300 5155 1735 235 97 19 chr10 96343304 96343780 -43972985 - Charlie1a DNA MER1_type -942 513 1 2199 117 10 0 chr10 96344173 96344472 -43972293 + AluSg SINE Alu 1 302 -8 1896 149 17 3 chr10 96344734 96345035 -43971730 + AluJb SINE Alu 1 305 -7 489 301 18 48 chr10 96345075 96345299 -43971466 - MIR SINE MIR -10 252 36 186 273 136 15 chr10 96345299 96345365 -43971400 - MER5A DNA MER1_type 0 189 116 * 195 309 12 36 chr10 96345311 96345395 -43971370 + MER5A DNA MER1_type 34 115 -74 2357 90 3 3 chr10 96345480 96345792 -43970973 - AluSx SINE Alu 0 312 1 2371 88 0 0 chr10 96345806 96346102 -43970663 - AluSc SINE Alu -13 296 1 694 344 94 33 chr10 96346127 96346634 -43970131 + L2 LINE L2 2737 3272 0 2212 175 20 32 chr10 96346674 96347019 -43969746 - MSTD LTR MaLR 0 396 53 2280 109 0 0 chr10 96347019 96347336 -43969429 - AluSx SINE Alu 0 317 1 2212 175 20 32 chr10 96347336 96347389 -43969376 - MSTD LTR MaLR -343 53 1 2364 82 23 0 chr10 96347696 96348000 -43968765 - AluY SINE Alu 0 311 1 2152 130 0 0 chr10 96348068 96348367 -43968398 + AluSx SINE Alu 1 299 -13 1253 86 0 0 chr10 96348899 96349050 -43967715 - AluSc SINE Alu -16 293 143 522 128 94 17 chr10 96349417 96349534 -43967231 - L1MB7 LINE L1 -1 6183 6058 2588 165 18 42 chr10 96349539 96349943 -43966822 - L1MB7 LINE L1 -77 6107 5716 1936 125 37 20 chr10 96349943 96350238 -43966527 + AluJb SINE Alu 1 300 -12 2588 165 18 42 chr10 96350238 96350354 -43966411 - L1MB7 LINE L1 -468 5716 5599 1907 141 14 0 chr10 96350729 96351019 -43965746 + AluSx SINE Alu 1 294 -18 1977 126 0 14 chr10 96351021 96351307 -43965458 + AluSx SINE Alu 1 282 -30 31 26 0 0 chr10 96351319 96351357 -43965408 + AT_rich Low_complexity Low_complexity 1 38 0 893 109 0 8 chr10 96351371 96351499 -43965266 + FLAM_C SINE Alu 9 135 -8 504 74 74 0 chr10 96351499 96351620 -43965145 + (TA)n Simple_repeat Simple_repeat 1 130 0 284 252 136 0 chr10 96354529 96354632 -43962133 + L2 LINE L2 3197 3313 0 1655 131 26 64 chr10 96354857 96355169 -43961596 - AluJb SINE Alu -12 300 1 2003 123 3 40 chr10 96355256 96355557 -43961208 + AluSx SINE Alu 3 292 -20 376 288 46 33 chr10 96355738 96355891 -43960874 + MER5B DNA MER1_type 2 156 -22 295 262 195 34 chr10 96355944 96356093 -43960672 + MIR SINE MIR 1 173 -89 1554 192 24 11 chr10 96356521 96356808 -43959957 + AluJo SINE Alu 1 291 -21 389 252 70 9 chr10 96356853 96356968 -43959797 - L2 LINE L2 -4 3309 3188 312 146 18 0 chr10 96357082 96357137 -43959628 - Alu SINE Alu 0 308 253 2185 95 0 3 chr10 96357149 96357469 -43959296 - AluY SINE Alu 0 319 1 249 159 0 0 chr10 96357592 96357636 -43959129 + (TA)n Simple_repeat Simple_repeat 2 45 0 2069 112 14 10 chr10 96357640 96357936 -43958829 - AluSp SINE Alu -16 297 1 1845 151 0 35 chr10 96358928 96359239 -43957526 - AluJb SINE Alu -12 300 1 2133 128 3 13 chr10 96359245 96359551 -43957214 - AluSg SINE Alu -7 303 1 1823 133 0 0 chr10 96359677 96359926 -43956839 + AluSx SINE Alu 1 249 -63 208 295 58 45 chr10 96360122 96360278 -43956487 + L2 LINE L2 2220 2377 -937 1641 133 54 21 chr10 96360331 96360610 -43956155 - AluJb SINE Alu -8 304 17 792 141 30 116 chr10 96360685 96360884 -43955881 - AluJo SINE Alu -129 183 2 1626 168 7 11 chr10 96361677 96361957 -43954808 + AluJo SINE Alu 34 312 0 1689 144 0 58 chr10 96361962 96362274 -43954491 + AluJo SINE Alu 1 294 -18 1933 151 24 7 chr10 96362653 96362951 -43953814 - AluSx SINE Alu -9 303 1 273 263 80 36 chr10 96363171 96363308 -43953457 + MIR SINE MIR 8 150 -112 1110 149 0 0 chr10 96363380 96363541 -43953224 + MER2 DNA MER2_type 10 170 -175 2356 102 7 0 chr10 96363541 96363845 -43952920 + AluSx SINE Alu 1 306 -6 1377 134 0 5 chr10 96363846 96364040 -43952725 + AluY SINE Alu 1 193 -118 24 32 0 0 chr10 96364045 96364076 -43952689 + AT_rich Low_complexity Low_complexity 1 31 0 486 0 0 0 chr10 96364124 96364178 -43952587 + (TA)n Simple_repeat Simple_repeat 2 55 0 2266 107 3 0 chr10 96364404 96364702 -43952063 + AluSp SINE Alu 1 299 -14 2718 196 84 56 chr10 96364703 96364909 -43951856 + ERVL LTR ERVL 342 541 -5223 2231 125 3 0 chr10 96364909 96365220 -43951545 - AluSx SINE Alu 0 312 1 2718 196 84 56 chr10 96365220 96365671 -43951094 + ERVL LTR ERVL 541 1017 -4747 566 188 16 36 chr10 96365673 96365851 -43950914 + MLT1-int LTR MaLR 618 880 -491 282 215 0 15 chr10 96365918 96365983 -43950782 + MLT-int LTR MaLR 680 743 -992 1555 213 24 119 chr10 96366063 96366185 -43950580 + MLT1B-int LTR MaLR 1267 1399 -336 2251 101 3 10 chr10 96366185 96366482 -43950283 + AluSx SINE Alu 1 295 -17 1555 213 24 119 chr10 96366482 96366722 -43950043 + MLT1B-int LTR MaLR 1399 1660 -75 2053 102 41 3 chr10 96366722 96367015 -43949750 - AluY SINE Alu -7 304 1 1555 213 24 119 chr10 96367015 96367027 -43949738 + MLT1B-int LTR MaLR 1660 1672 -63 942 128 0 0 chr10 96367027 96367160 -43949605 - FLAM_C SINE Alu 0 133 1 1555 213 24 119 chr10 96367160 96367294 -43949471 + MLT1B-int LTR MaLR 1672 1728 -7 1607 198 81 3 chr10 96367302 96367661 -43949104 + MLT1B LTR MaLR 4 390 0 614 198 12 80 chr10 96367661 96367815 -43948950 + LTR8-int LTR ERV1 3842 4005 -186 4055 116 13 96 chr10 96367815 96367973 -43948792 + LTR8 LTR ERV1 1 170 -521 1945 135 51 0 chr10 96367973 96368269 -43948496 + AluSx SINE Alu 1 311 -1 4055 116 13 96 chr10 96368269 96368699 -43948066 + LTR8 LTR ERV1 170 516 -175 1803 132 68 27 chr10 96368699 96368994 -43947771 + AluSx SINE Alu 3 309 -3 4055 116 13 96 chr10 96368994 96369157 -43947608 + LTR8 LTR ERV1 516 691 0 2360 94 3 0 chr10 96369558 96369856 -43946909 + AluSg SINE Alu 1 299 -11 288 232 147 0 chr10 96369875 96369970 -43946795 + MIR SINE MIR 41 149 -59 899 137 8 0 chr10 96369971 96370102 -43946663 - AluJb SINE Alu -180 132 1 298 208 0 0 chr10 96370102 96370155 -43946610 + MLT1H LTR MaLR 497 549 0 2356 93 0 7 chr10 96370229 96370529 -43946236 + AluSg SINE Alu 1 298 -12 584 264 120 41 chr10 96371143 96371511 -43945254 - L2 LINE L2 -565 2749 2353 499 232 134 16 chr10 96371566 96371760 -43945005 - MIR SINE MIR -2 260 44 239 188 78 0 chr10 96371787 96371851 -43944914 + MIR3 SINE MIR 102 170 -38 372 94 16 31 chr10 96372371 96372435 -43944330 - MLT1A2 LTR MaLR -8 366 304 229 180 80 0 chr10 96372428 96372478 -43944287 - Alu SINE Alu -4 298 245 * 584 222 5 5 chr10 96372639 96372828 -43943937 + AluSg/x SINE Alu 120 308 -1 591 232 285 32 chr10 96372828 96372950 -43943815 - L2 LINE L2 -1486 1828 1738 204 67 0 0 chr10 96372950 96372980 -43943785 + (TG)n Simple_repeat Simple_repeat 2 31 0 591 232 285 32 chr10 96372980 96373292 -43943473 - L2 LINE L2 -1576 1738 1284 232 273 0 15 chr10 96373294 96373360 -43943405 - L1MC/D LINE L1 -2273 5535 5471 3129 79 20 44 chr10 96373386 96373440 -43943325 - MLT2A1 LTR ERVL 0 444 390 180 0 0 0 chr10 96373440 96373460 -43943305 + (GA)n Simple_repeat Simple_repeat 2 21 0 3129 79 20 44 chr10 96373460 96373480 -43943285 - MLT2A1 LTR ERVL -54 390 371 1821 85 35 27 chr10 96373480 96373740 -43943025 - AluSg SINE Alu -12 298 37 3129 79 20 44 chr10 96373740 96374119 -43942646 - MLT2A1 LTR ERVL -73 371 1 614 186 10 0 chr10 96374162 96374264 -43942501 - FLAM_A SINE Alu -28 114 12 233 133 22 0 chr10 96374295 96374340 -43942425 - L1MC/D LINE L1 -2342 5466 5421 2116 137 0 3 chr10 96374351 96374658 -43942107 + AluSx SINE Alu 3 308 -4 1902 127 97 47 chr10 96374662 96374820 -43941945 + MLT1A1 LTR MaLR 5 154 -211 2042 136 7 3 chr10 96374820 96375114 -43941651 + AluSq SINE Alu 1 295 -18 1902 127 97 47 chr10 96375114 96375295 -43941470 + MLT1A1 LTR MaLR 154 361 -4 378 178 39 5 chr10 96375295 96375395 -43941370 + L1MC4a LINE L1 7122 7280 -611 243 0 0 0 chr10 96375454 96375481 -43941284 + (CA)n Simple_repeat Simple_repeat 2 28 0 888 198 36 5 chr10 96375481 96375673 -43941092 + L1MC4 LINE L1 7481 7678 -364 2270 123 0 0 chr10 96375687 96375996 -43940769 + AluSg SINE Alu 1 309 -1 1301 119 0 0 chr10 96376102 96376278 -43940487 + AluSg/x SINE Alu 120 295 -15 183 42 0 0 chr10 96376336 96376360 -43940405 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 713 207 0 50 chr10 96376519 96376659 -43940106 - FLAM_A SINE Alu 0 133 1 2011 115 4 4 chr10 96376662 96376931 -43939834 - AluSx SINE Alu -43 269 1 1605 128 8 20 chr10 96376989 96377238 -43939527 - AluSx SINE Alu -17 295 50 1020 155 159 41 chr10 96377243 96377383 -43939382 - L1MC2 LINE L1 -375 5969 5847 1904 127 6 40 chr10 96377383 96377706 -43939059 - AluSx SINE Alu 0 312 1 1020 155 159 41 chr10 96377706 96377810 -43938955 - L1MC2 LINE L1 -497 5847 5696 432 244 0 0 chr10 96377810 96377892 -43938873 - FRAM/FAM SINE Alu -94 82 1 698 80 89 0 chr10 96377895 96378007 -43938758 - L1MC/D LINE L1 -904 5440 5319 1197 157 5 16 chr10 96378013 96378198 -43938567 + AluSx SINE Alu 5 187 -125 1038 246 95 14 chr10 96378324 96378599 -43938166 - L1MEd LINE L1 -2641 3488 3164 2543 74 3 0 chr10 96378599 96378909 -43937856 + AluSp SINE Alu 1 311 -2 1038 246 95 14 chr10 96378909 96379064 -43937701 - L1MEd LINE L1 -2965 3164 3023 1614 177 0 31 chr10 96379064 96379352 -43937413 - AluJb SINE Alu 0 312 34 2480 72 0 0 chr10 96379369 96379662 -43937103 - AluSc SINE Alu -7 302 10 851 217 54 0 chr10 96379675 96379841 -43936924 - FAM SINE Alu 0 175 1 5469 131 88 50 chr10 96379861 96380967 -43935798 - L1MC1 LINE L1 0 6333 5185 1848 103 22 26 chr10 96380980 96381253 -43935512 - AluY SINE Alu 0 311 40 2213 206 71 53 chr10 96381253 96381694 -43935071 - L1MEd LINE L1 -3113 3016 2556 1672 173 0 41 chr10 96381694 96381989 -43934776 + AluJo SINE Alu 9 291 -21 2213 206 71 53 chr10 96381989 96382251 -43934514 - L1MEd LINE L1 -3573 2556 2300 2179 110 0 3 chr10 96382324 96382614 -43934151 - AluSx SINE Alu -23 289 1 21 82 0 0 chr10 96382802 96382851 -43933914 + AT_rich Low_complexity Low_complexity 1 49 0 232 323 101 25 chr10 96382910 96383068 -43933697 - MIR SINE MIR -36 226 57 212 260 20 0 chr10 96383634 96383684 -43933081 + CT-rich Low_complexity Low_complexity 2 52 0 270 310 110 0 chr10 96383776 96383876 -43932889 - LTR33 LTR ERVL -305 216 106 953 262 39 26 chr10 96384011 96384316 -43932449 - L1MC/D LINE L1 -2020 5788 5480 1813 176 6 0 chr10 96384498 96384810 -43931955 + L1MC3 LINE L1 7190 7503 -282 675 272 19 6 chr10 96384805 96384963 -43931802 + L1MC4 LINE L1 5477 5636 -2172 * 403 113 48 0 chr10 96385090 96385152 -43931613 - L1MC3 LINE L1 -237 7548 7484 353 141 16 0 chr10 96385148 96385212 -43931553 - L1MC3 LINE L1 -523 7262 7198 * 262 272 0 48 chr10 96385425 96385528 -43931237 - L1MEd LINE L1 -4917 1202 1105 303 200 88 84 chr10 96385601 96385668 -43931097 - L1MC5 LINE L1 -568 7474 7409 189 0 0 0 chr10 96385668 96385689 -43931076 + (TA)n Simple_repeat Simple_repeat 2 22 0 303 200 88 84 chr10 96385689 96385845 -43930920 - L1MC5 LINE L1 -633 7409 7235 310 193 0 110 chr10 96385860 96385969 -43930796 - L1MC5 LINE L1 -733 7228 7132 901 238 49 16 chr10 96385992 96386236 -43930529 - L1MC5 LINE L1 -2172 5636 5385 2235 101 11 0 chr10 96386723 96387009 -43929756 - AluSq SINE Alu -24 289 1 287 245 144 14 chr10 96387598 96387737 -43929028 - MIR SINE MIR -26 236 80 21 36 0 0 chr10 96388455 96388483 -43928282 + AT_rich Low_complexity Low_complexity 1 28 0 272 217 0 24 chr10 96388661 96388744 -43928021 + (TA)n Simple_repeat Simple_repeat 1 81 0 346 234 0 43 chr10 96388747 96388841 -43927924 + L1MC4 LINE L1 6614 6703 -1339 587 195 78 16 chr10 96388965 96389093 -43927672 + AluJo SINE Alu 3 138 -174 2485 76 3 0 chr10 96389382 96389686 -43927079 - AluSp SINE Alu -8 305 1 2444 231 114 0 chr10 96389691 96390413 -43926352 + L1M4 LINE L1 3228 4031 -2115 5102 105 96 23 chr10 96390414 96391292 -43925473 - Tigger3b DNA MER2_type 0 1231 290 1616 186 3 14 chr10 96391292 96391577 -43925188 + AluJo SINE Alu 1 282 -30 636 105 0 0 chr10 96391596 96391682 -43925083 + AluSg/x SINE Alu 218 303 -7 2311 110 3 0 chr10 96391697 96392006 -43924759 + AluSg SINE Alu 1 310 0 1319 181 57 28 chr10 96392025 96392055 -43924710 - Tigger3b DNA MER2_type -2719 310 282 2617 27 3 3 chr10 96392055 96392351 -43924414 + AluY SINE Alu 1 296 -15 1319 181 57 28 chr10 96392351 96392602 -43924163 - Tigger3b DNA MER2_type -2747 282 21 281 222 0 69 chr10 96392623 96392643 -43924122 + L1M4 LINE L1 4033 4053 -2093 2176 108 0 26 chr10 96392643 96392948 -43923817 + AluSq SINE Alu 2 298 -15 281 222 0 69 chr10 96392948 96392999 -43923766 + L1M4 LINE L1 4053 4099 -2047 1933 151 24 7 chr10 96393519 96393817 -43922948 - AluSx SINE Alu -9 303 1 273 263 80 36 chr10 96394037 96394174 -43922591 + MIR SINE MIR 8 150 -112 1785 156 45 36 chr10 96394246 96394407 -43922358 + MER2 DNA MER2_type 10 168 -177 2287 92 3 7 chr10 96394407 96394700 -43922065 + AluSx SINE Alu 1 292 -20 1785 156 45 36 chr10 96394700 96394871 -43921894 + MER2 DNA MER2_type 168 345 0 2632 64 3 0 chr10 96395062 96395374 -43921391 - AluSp SINE Alu 0 313 1 1617 177 122 60 chr10 96397003 96397471 -43919294 - Charlie4a DNA MER1_type -11 497 1 299 194 0 30 chr10 96397520 96397587 -43919178 - MIR SINE MIR -196 66 2 2129 119 3 0 chr10 96397757 96398052 -43918713 + AluY SINE Alu 1 296 -15 735 184 54 0 chr10 96398099 96398246 -43918519 - MER5A DNA MER1_type 0 189 35 282 319 44 31 chr10 96398104 96398264 -43918501 + MER5A DNA MER1_type 20 181 -8 * 902 147 0 0 chr10 96398438 96398574 -43918191 + AluJb SINE Alu 161 296 -16 250 278 83 69 chr10 96398635 96398779 -43917986 - MLT1K LTR MaLR -9 579 434 2070 128 0 3 chr10 96399362 96399651 -43917114 + AluSx SINE Alu 1 288 -24 512 176 8 50 chr10 96399684 96399803 -43916962 + FLAM_A SINE Alu 20 133 -9 354 45 0 0 chr10 96399807 96399851 -43916914 + (TG)n Simple_repeat Simple_repeat 1 44 0 719 168 67 0 chr10 96400083 96400202 -43916563 + FLAM_C SINE Alu 1 127 -6 1917 103 19 4 chr10 96400225 96400496 -43916269 + AluSx SINE Alu 1 275 -37 583 99 0 0 chr10 96400498 96400579 -43916186 - MER41A LTR ERV1 -159 395 315 2102 88 0 4 chr10 96400710 96400973 -43915792 - AluY SINE Alu -49 262 1 2462 73 15 12 chr10 96400974 96401302 -43915463 - MER41A LTR ERV1 -225 329 1 483 68 0 0 chr10 96401426 96401499 -43915266 - Alu SINE Alu -2 310 238 2506 72 0 3 chr10 96401429 96401736 -43915029 - AluY SINE Alu -5 306 1 324 253 89 21 chr10 96401779 96401969 -43914796 + L1MC4 LINE L1 7839 8041 -1 655 151 0 56 chr10 96402448 96402574 -43914191 + L1MB3 LINE L1 6064 6182 -1 22 0 0 0 chr10 96403190 96403212 -43913553 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 96404903 96404934 -43911831 + AT_rich Low_complexity Low_complexity 1 31 0 2210 115 0 3 chr10 96405683 96405987 -43910778 + AluSg SINE Alu 1 303 -7 2269 82 0 3 chr10 96406052 96406345 -43910420 + AluY SINE Alu 1 292 -19 1683 153 49 17 chr10 96406349 96406637 -43910128 + AluJb SINE Alu 1 297 -15 1441 188 6 60 chr10 96406641 96406955 -43909810 + AluJo SINE Alu 1 297 -15 2251 104 7 0 chr10 96407092 96407389 -43909376 + AluSx SINE Alu 2 300 -12 807 151 0 17 chr10 96407492 96407611 -43909154 - FLAM_C SINE Alu -25 118 2 451 274 75 30 chr10 96409175 96409288 -43907477 + MER5A DNA MER1_type 4 130 -59 1525 182 19 36 chr10 96409288 96409595 -43907170 - AluJo SINE Alu -10 302 1 451 274 75 30 chr10 96409595 96409658 -43907107 + MER5A DNA MER1_type 130 189 0 1957 133 26 3 chr10 96409824 96410126 -43906639 - AluSx SINE Alu -1 311 3 1302 186 40 108 chr10 96410131 96410482 -43906283 - L1M4 LINE L1 -1646 4500 4184 2066 130 0 3 chr10 96410482 96410781 -43905984 - AluSx SINE Alu -14 298 1 1302 186 40 108 chr10 96410781 96410875 -43905890 - L1M4 LINE L1 -1962 4184 4085 1717 177 7 7 chr10 96410875 96411174 -43905591 + AluSx SINE Alu 1 299 -13 888 156 12 12 chr10 96411182 96411342 -43905423 + AluJo SINE Alu 14 173 -139 2245 85 16 10 chr10 96411578 96411884 -43904881 + AluSp SINE Alu 5 312 -1 338 300 71 0 chr10 96412111 96412259 -43904506 - L2 LINE L2 -6 3266 104 1964 152 0 0 chr10 96412599 96412889 -43903876 + AluSx SINE Alu 1 290 -22 755 92 0 0 chr10 96413155 96413253 -43903512 + HY3 scRNA scRNA 2 99 -2 25 0 0 0 chr10 96413367 96413392 -43903373 + AT_rich Low_complexity Low_complexity 1 25 0 2399 93 0 3 chr10 96414717 96415028 -43901737 - AluSq SINE Alu -3 310 1 351 161 18 0 chr10 96415047 96415103 -43901662 - MER58A DNA MER1_type 0 224 168 439 226 0 0 chr10 96415105 96415189 -43901576 - MER58A DNA MER1_type -23 84 1 221 202 131 12 chr10 96415325 96415346 -43901419 - L2 LINE L2 -1202 2112 2095 696 189 24 24 chr10 96415346 96415473 -43901292 + FLAM_A SINE Alu 4 130 -3 221 202 131 12 chr10 96415473 96415535 -43901230 - L2 LINE L2 -1219 2095 2019 1878 171 3 0 chr10 96415537 96415835 -43900930 + AluJb SINE Alu 6 304 -8 963 210 160 42 chr10 96415840 96415925 -43900840 - L2 LINE L2 -1389 1925 1851 2209 97 7 13 chr10 96415925 96416233 -43900532 + AluSp SINE Alu 1 306 -7 963 210 160 42 chr10 96416233 96416575 -43900190 - L2 LINE L2 -1463 1851 1397 1798 147 3 52 chr10 96416583 96416890 -43899875 + AluJo SINE Alu 1 292 -20 1160 62 6 37 chr10 96417608 96417770 -43898995 + AluSp/q SINE Alu 155 311 -2 2093 136 0 0 chr10 96417779 96418074 -43898691 + AluSx SINE Alu 1 295 -17 2419 103 0 0 chr10 96418079 96418391 -43898374 + AluSx SINE Alu 1 312 0 827 233 0 0 chr10 96419117 96419263 -43897502 + FRAM SINE Alu 1 146 -30 491 242 180 28 chr10 96419619 96419830 -43896935 - L1MC4a LINE L1 -1865 5943 5701 2124 93 0 0 chr10 96419832 96420102 -43896663 + AluSx SINE Alu 21 290 -22 21 0 0 0 chr10 96420132 96420153 -43896612 + AT_rich Low_complexity Low_complexity 1 21 0 1435 186 28 63 chr10 96420472 96420790 -43895975 - AluJb SINE Alu -5 307 1 1792 138 11 11 chr10 96420861 96421129 -43895636 - AluJo SINE Alu -31 281 14 199 275 60 120 chr10 96422086 96422253 -43894512 + L2 LINE L2 3144 3300 -13 2316 99 3 0 chr10 96422255 96422559 -43894206 - AluSq SINE Alu -7 306 2 239 278 44 56 chr10 96423542 96423632 -43893133 - MIR SINE MIR -39 223 135 1682 119 71 19 chr10 96423920 96424188 -43892577 + AluSx SINE Alu 1 282 -30 2100 128 16 3 chr10 96424376 96424681 -43892084 - AluJb SINE Alu -3 309 1 2146 102 55 0 chr10 96425181 96425474 -43891291 - AluSq SINE Alu -4 309 1 749 198 0 0 chr10 96425754 96425870 -43890895 + FLAM_A SINE Alu 1 116 -17 1757 127 0 4 chr10 96425893 96426137 -43890628 + AluSx SINE Alu 1 243 -69 791 10 10 0 chr10 96426155 96426251 -43890514 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 2438 76 0 7 chr10 96426592 96426893 -43889872 + AluSp SINE Alu 1 299 -14 2316 97 0 0 chr10 96426898 96427197 -43889568 + AluSx SINE Alu 1 299 -13 279 299 172 17 chr10 96428790 96428964 -43887801 + MIR SINE MIR 13 213 -49 2460 143 7 51 chr10 96429019 96429468 -43887297 - LTR3 LTR ERVK -3 429 1 21 0 0 0 chr10 96429708 96429729 -43887036 + AT_rich Low_complexity Low_complexity 1 21 0 378 42 0 0 chr10 96430593 96430641 -43886124 + (TG)n Simple_repeat Simple_repeat 2 49 0 517 270 0 16 chr10 96430781 96430907 -43885858 - L2 LINE L2 0 3272 3149 24 32 0 0 chr10 96431199 96431230 -43885535 + AT_rich Low_complexity Low_complexity 1 31 0 362 301 40 57 chr10 96431991 96432167 -43884598 + MIR SINE MIR 20 192 -70 522 205 174 7 chr10 96433114 96433300 -43883465 + MIR SINE MIR 15 232 -30 190 263 40 53 chr10 96433634 96433710 -43883055 - L2 LINE L2 -8 3305 3231 243 325 44 18 chr10 96433767 96433881 -43882884 + L2 LINE L2 3189 3305 -8 198 0 0 0 chr10 96433986 96434008 -43882757 + (T)n Simple_repeat Simple_repeat 1 22 0 1360 197 7 15 chr10 96434041 96434310 -43882455 + AluJb SINE Alu 21 287 -25 2236 117 3 0 chr10 96434313 96434622 -43882143 + AluSg SINE Alu 1 310 0 2840 162 34 8 chr10 96435428 96435935 -43880830 + L1MB7 LINE L1 5663 6182 -2 9074 175 23 54 chr10 96435935 96436965 -43879800 - L1MA3 LINE L1 0 7724 6663 2097 113 21 3 chr10 96436965 96437256 -43879509 - AluSx SINE Alu -11 301 6 9074 175 23 54 chr10 96437256 96437495 -43879270 - L1MA3 LINE L1 -1061 6663 6418 1939 172 0 6 chr10 96437495 96437809 -43878956 - AluSx SINE Alu 0 312 1 9074 175 23 54 chr10 96437809 96438413 -43878352 - L1MA3 LINE L1 -1306 6418 5797 1126 169 0 0 chr10 96438413 96438590 -43878175 - AluJb SINE Alu -2 310 134 9074 175 23 54 chr10 96438590 96438962 -43877803 - L1MA3 LINE L1 -1927 5797 5415 2241 100 10 3 chr10 96438962 96439273 -43877492 + AluSp SINE Alu 1 313 0 9074 175 23 54 chr10 96439273 96440312 -43876453 - L1MA3 LINE L1 -2309 5415 4345 216 0 0 0 chr10 96440312 96440336 -43876429 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1657 180 3 17 chr10 96440338 96440501 -43876264 - AluJb SINE Alu -25 287 128 2172 127 0 3 chr10 96440501 96440808 -43875957 - AluSx SINE Alu -6 306 1 1657 180 3 17 chr10 96440808 96440933 -43875832 - AluJb SINE Alu -184 128 3 2322 103 7 0 chr10 96440935 96441235 -43875530 - AluSg SINE Alu -8 302 1 9074 175 23 54 chr10 96441235 96441536 -43875229 - L1MA3 LINE L1 -3381 4343 4157 771 161 0 7 chr10 96441536 96441673 -43875092 + L1PA15 LINE L1 5199 5334 -812 1415 124 9 19 chr10 96441674 96441884 -43874881 + AluJb SINE Alu 91 298 -14 5041 128 36 17 chr10 96441884 96442244 -43874521 + L1PA15 LINE L1 5322 5674 -491 234 0 0 0 chr10 96442244 96442270 -43874495 + (CA)n Simple_repeat Simple_repeat 1 26 0 5041 128 36 17 chr10 96442270 96442716 -43874049 + L1PA15 LINE L1 5674 6143 -22 1807 165 7 13 chr10 96442717 96443020 -43873745 + AluSx SINE Alu 1 301 -11 911 244 31 4 chr10 96443024 96443249 -43873516 - L1MA3 LINE L1 -3404 4161 3931 2147 120 0 0 chr10 96443249 96443541 -43873224 - AluSg SINE Alu -16 294 3 258 111 0 0 chr10 96443569 96443614 -43873151 - AluSp/q SINE Alu -1 302 258 8761 118 44 22 chr10 96443614 96444104 -43872661 - L1MA3 LINE L1 -4556 3009 2531 2374 95 0 0 chr10 96444104 96444408 -43872357 + AluSq SINE Alu 1 304 -9 8761 118 44 22 chr10 96444408 96444457 -43872308 - L1MA3 LINE L1 -5034 2531 2485 2131 110 7 0 chr10 96444457 96444747 -43872018 - AluSq SINE Alu -17 296 5 8761 118 44 22 chr10 96444747 96445607 -43871158 - L1MA3 LINE L1 -5080 2485 1578 1514 101 0 5 chr10 96445728 96445949 -43870816 + AluSc SINE Alu 84 303 0 808 147 9 9 chr10 96445962 96446078 -43870687 + FLAM_C SINE Alu 3 118 -25 29 0 0 0 chr10 96446078 96446107 -43870658 + AT_rich Low_complexity Low_complexity 1 29 0 410 262 83 57 chr10 96446142 96446276 -43870489 + L1M4b LINE L1 11 155 -6704 2015 126 44 0 chr10 96446276 96446569 -43870196 + AluSx SINE Alu 2 307 -5 410 262 83 57 chr10 96446569 96446663 -43870102 + L1M4b LINE L1 155 245 -6614 2453 91 0 0 chr10 96447164 96447471 -43869294 + AluSq SINE Alu 1 307 -6 2664 142 8 49 chr10 96447511 96447821 -43868944 + L1M4b LINE L1 555 841 -6116 1808 141 12 38 chr10 96447821 96448141 -43868624 + AluJo SINE Alu 1 312 0 2664 142 8 49 chr10 96448141 96448301 -43868464 + L1M4b LINE L1 841 1006 -5951 771 159 71 8 chr10 96448363 96448489 -43868276 + FLAM_C SINE Alu 2 135 -8 1622 143 48 7 chr10 96448500 96448517 -43868248 + MER7A DNA MER2_type 65 80 -2958 2324 112 0 0 chr10 96448517 96448822 -43867943 - AluSq SINE Alu -8 305 1 1622 143 48 7 chr10 96448822 96449077 -43867688 + MER7A DNA MER2_type 80 346 0 6184 128 54 70 chr10 96449081 96449478 -43867287 + L1M4b LINE L1 1009 1411 -5546 2935 3 0 0 chr10 96449478 96449789 -43866976 + AluYa5 SINE Alu 1 311 0 6184 128 54 70 chr10 96449789 96450398 -43866367 + L1M4b LINE L1 1411 2028 -4929 894 163 0 0 chr10 96450398 96450527 -43866238 + FLAM_A SINE Alu 3 131 -2 6184 128 54 70 chr10 96450527 96450657 -43866108 + L1M4b LINE L1 2028 2128 -4829 2347 63 0 17 chr10 96450657 96450957 -43865808 + AluY SINE Alu 1 295 -16 6184 128 54 70 chr10 96450957 96451054 -43865711 + L1M4b LINE L1 2128 2225 -4732 818 161 25 125 chr10 96451044 96451174 -43865591 + L1M4b LINE L1 3082 3223 -3734 * 2482 91 0 3 chr10 96451174 96451483 -43865282 + AluSq SINE Alu 1 308 -5 818 161 25 125 chr10 96451483 96451518 -43865247 + L1M4b LINE L1 3223 3260 -3697 905 135 0 23 chr10 96451518 96451651 -43865114 + FLAM_C SINE Alu 3 132 -1 818 161 25 125 chr10 96451651 96451797 -43864968 + L1M4b LINE L1 3260 3369 -3588 804 234 75 18 chr10 96451801 96451977 -43864788 + L1M4b LINE L1 3446 3639 -3318 2277 80 13 3 chr10 96451977 96452278 -43864487 + AluY SINE Alu 1 301 -10 804 234 75 18 chr10 96452278 96452328 -43864437 + L1M4b LINE L1 3639 3685 -3272 1088 177 31 0 chr10 96452330 96452522 -43864243 - AluJb SINE Alu -5 307 110 281 154 0 0 chr10 96452524 96452576 -43864189 + L1M4b LINE L1 3677 3728 -3229 1501 191 11 66 chr10 96452721 96452841 -43863924 + MLT1A1 LTR MaLR 2 127 -238 4874 79 25 50 chr10 96452841 96452945 -43863820 + LTR8 LTR ERV1 1 106 -585 2502 62 0 0 chr10 96452945 96453254 -43863511 - AluY SINE Alu -2 309 1 4874 79 25 50 chr10 96453254 96453856 -43862909 + LTR8 LTR ERV1 106 690 -1 1501 191 11 66 chr10 96453856 96453939 -43862826 + MLT1A1 LTR MaLR 127 213 -152 2681 164 27 96 chr10 96453939 96454488 -43862277 + LTR9 LTR ERV1 1 499 -113 2091 125 3 0 chr10 96454488 96454791 -43861974 - AluSx SINE Alu -8 304 1 2681 164 27 96 chr10 96454791 96454898 -43861867 + LTR9 LTR ERV1 499 612 0 1501 191 11 66 chr10 96454898 96454986 -43861779 + MLT1A1 LTR MaLR 213 271 -94 1465 171 0 12 chr10 96454986 96455244 -43861521 + AluJo SINE Alu 14 268 -44 1501 191 11 66 chr10 96455244 96455327 -43861438 + MLT1A1 LTR MaLR 271 357 -8 270 188 78 0 chr10 96455847 96455911 -43860854 - MIR3 SINE MIR -38 170 102 588 232 134 16 chr10 96455938 96456132 -43860633 + MIR SINE MIR 44 260 -2 709 255 128 49 chr10 96456187 96456555 -43860210 + L2 LINE L2 2353 2749 -565 2230 100 0 0 chr10 96457169 96457469 -43859296 - AluSg SINE Alu -10 300 1 292 208 0 0 chr10 96457543 96457596 -43859169 - MLT1H LTR MaLR 0 549 497 843 137 8 0 chr10 96457596 96457727 -43859038 + AluJb SINE Alu 1 132 -180 327 232 147 0 chr10 96457728 96457823 -43858942 - MIR SINE MIR -59 149 41 2244 91 3 0 chr10 96457842 96458140 -43858625 - AluSg SINE Alu -11 299 1 4105 115 13 92 chr10 96458541 96458704 -43858061 - LTR8 LTR ERV1 0 691 517 1670 136 68 27 chr10 96458704 96458999 -43857766 - AluSx SINE Alu -3 309 3 4105 115 13 92 chr10 96458999 96459426 -43857339 - LTR8 LTR ERV1 -174 517 170 1742 144 51 0 chr10 96459426 96459718 -43857047 - AluSx SINE Alu -5 307 1 4105 115 13 92 chr10 96459718 96459876 -43856889 - LTR8 LTR ERV1 -521 170 1 618 198 12 80 chr10 96459876 96460030 -43856735 - MER77-int LTR ERV1 -205 3986 3842 1605 198 81 3 chr10 96460030 96460389 -43856376 - MLT1B LTR MaLR 0 390 4 1616 213 21 117 chr10 96460397 96460531 -43856234 - MLT1B-int LTR MaLR -7 1728 1583 933 135 0 0 chr10 96460531 96460664 -43856101 + FLAM_C SINE Alu 1 133 0 1616 213 21 117 chr10 96460664 96460676 -43856089 - MLT1B-int LTR MaLR -152 1583 1571 1992 96 41 3 chr10 96460676 96460969 -43855796 + AluY SINE Alu 1 304 -7 1616 213 21 117 chr10 96460969 96461209 -43855556 - MLT1B-int LTR MaLR -164 1571 1399 2149 98 3 10 chr10 96461209 96461506 -43855259 - AluSx SINE Alu -17 295 1 1616 213 21 117 chr10 96461506 96461628 -43855137 - MLT1B-int LTR MaLR -336 1399 1267 282 215 0 15 chr10 96461708 96461773 -43854992 - MLT1B-int LTR MaLR -992 743 680 572 188 16 36 chr10 96461840 96462018 -43854747 - MLT1-int LTR MaLR -491 880 618 2684 198 84 57 chr10 96462020 96462471 -43854294 - ERVL LTR ERVL -4747 1017 541 2109 125 3 0 chr10 96462471 96462782 -43853983 + AluSx SINE Alu 1 312 0 2684 198 84 57 chr10 96462782 96462983 -43853782 - ERVL LTR ERVL -5223 541 347 2211 99 3 0 chr10 96462983 96463286 -43853479 - AluSp SINE Alu -8 305 2 5144 230 59 69 chr10 96463287 96463842 -43852923 - MER77-int LTR ERV1 -1009 4905 4346 2243 71 17 0 chr10 96463842 96464139 -43852626 - AluSp SINE Alu -11 302 1 5144 230 59 69 chr10 96464139 96464177 -43852588 - MER77-int LTR ERV1 -1568 4346 4309 2855 150 24 96 chr10 96464177 96464836 -43851929 - LTR9 LTR ERV1 0 612 1 5144 230 59 69 chr10 96464836 96465806 -43850959 - MER77-int LTR ERV1 -1605 4309 1677 302 239 102 0 chr10 96465886 96465974 -43850791 - MER77-int LTR ERV1 -2225 4533 4437 914 85 23 0 chr10 96465996 96466126 -43850639 - AluSg/x SINE Alu -23 289 157 259 191 0 0 chr10 96466128 96466170 -43850595 - AluY SINE Alu -127 174 133 2180 96 3 7 chr10 96466170 96466472 -43850293 - AluSp SINE Alu -12 301 1 824 265 26 22 chr10 96466474 96466691 -43850074 - MER77-int LTR ERV1 -2648 1543 1323 2049 112 7 13 chr10 96466691 96466994 -43849771 - AluSq SINE Alu -12 301 1 322 199 206 23 chr10 96466994 96467125 -43849640 - MER77-int LTR ERV1 -3871 320 166 790 184 0 0 chr10 96467129 96467265 -43849500 + FLAM_A SINE Alu 6 141 -1 531 218 21 0 chr10 96467266 96467379 -43849386 - MER77-int LTR ERV1 -3561 3197 52 1472 241 63 81 chr10 96467423 96468001 -43848764 - MER77 LTR ERV1 -6 599 164 1572 216 89 48 chr10 96468035 96468246 -43848519 + L1ME3A LINE L1 5643 5844 -326 2084 105 7 0 chr10 96468246 96468559 -43848206 + AluSq SINE Alu 1 315 0 1572 216 89 48 chr10 96468559 96468827 -43847938 + L1ME3A LINE L1 5844 6143 -27 1648 196 94 0 chr10 96468943 96469295 -43847470 + Charlie1 DNA MER1_type 579 963 -1798 630 96 0 0 chr10 96469303 96469386 -43847379 - AluS SINE Alu -229 84 2 238 103 128 0 chr10 96469393 96469432 -43847333 + Charlie1 DNA MER1_type 972 1015 -1746 * 518 132 33 58 chr10 96469431 96469552 -43847213 + Charlie1 DNA MER1_type 2638 2755 -6 210 158 0 0 chr10 96471661 96471699 -43845066 + A-rich Low_complexity Low_complexity 1 38 0 5240 203 60 111 chr10 96472409 96473499 -43843266 + L1M4 LINE L1 2387 3531 -2615 2198 89 7 0 chr10 96473499 96473803 -43842962 + AluSx SINE Alu 1 306 -6 2257 89 0 0 chr10 96473803 96474096 -43842669 + AluSc SINE Alu 1 293 -16 5240 203 60 111 chr10 96474096 96474500 -43842265 + L1M4 LINE L1 3530 3749 -2397 783 170 230 82 chr10 96474500 96474818 -43841947 + MLT1A1 LTR MaLR 1 365 0 5240 203 60 111 chr10 96474818 96475407 -43841358 + L1M4 LINE L1 3749 4366 -1780 3450 169 13 29 chr10 96475409 96476108 -43840657 - L1MB4 LINE L1 -6 6174 5487 2190 95 3 0 chr10 96476111 96476405 -43840360 - AluSx SINE Alu -17 295 1 1980 204 33 39 chr10 96476410 96476527 -43840238 - L1MB4 LINE L1 -868 5278 5162 2266 75 0 20 chr10 96476527 96476832 -43839933 - AluSp SINE Alu -14 299 1 1980 204 33 39 chr10 96476832 96477287 -43839478 - L1MB4 LINE L1 -984 5162 4706 2176 117 0 0 chr10 96477287 96477596 -43839169 - AluSx SINE Alu -3 309 1 1980 204 33 39 chr10 96477596 96477674 -43839091 - L1MB4 LINE L1 -1440 4706 4629 725 146 62 46 chr10 96477674 96477804 -43838961 - FLAM_C SINE Alu -1 132 1 1980 204 33 39 chr10 96477804 96478050 -43838715 - L1MB4 LINE L1 -1517 4629 2521 2300 80 3 0 chr10 96478092 96478393 -43838372 + AluSp SINE Alu 1 302 -11 396 0 0 0 chr10 96478393 96478437 -43838328 + (TA)n Simple_repeat Simple_repeat 2 45 0 418 265 52 0 chr10 96478450 96478586 -43838179 - L1MB4 LINE L1 -3629 2517 2375 830 162 84 12 chr10 96478602 96478769 -43837996 - AluJo SINE Alu -9 303 125 483 244 8 0 chr10 96478780 96478911 -43837854 - L1MB4 LINE L1 -3802 2344 2213 797 174 16 33 chr10 96478923 96479107 -43837658 + L1M4 LINE L1 4429 4609 -1537 1107 137 106 44 chr10 96479111 96479337 -43837428 + AluJo SINE Alu 66 305 -7 1827 105 0 0 chr10 96479395 96479643 -43837122 + AluSq SINE Alu 59 306 -7 1024 148 69 18 chr10 96479671 96479790 -43836975 + L1MC2 LINE L1 6116 6228 -116 1939 135 16 0 chr10 96479790 96480093 -43836672 + AluSx SINE Alu 2 309 -3 1024 148 69 18 chr10 96480093 96480190 -43836575 + L1MC2 LINE L1 6228 6343 -1 1638 169 3 3 chr10 96480644 96480946 -43835819 - AluJo SINE Alu -10 302 1 452 268 35 7 chr10 96480950 96481092 -43835673 + L2 LINE L2 3164 3309 -4 2164 92 0 7 chr10 96481198 96481493 -43835272 + AluSg SINE Alu 1 293 -17 455 258 23 8 chr10 96481494 96481626 -43835139 - L2 LINE L2 -953 2361 2228 1992 105 23 7 chr10 96481627 96481932 -43834833 + AluSp SINE Alu 1 310 -3 453 101 14 72 chr10 96482443 96482581 -43834184 + (TTCC)n Simple_repeat Simple_repeat 2 131 0 2308 92 0 13 chr10 96482581 96482895 -43833870 - AluSg SINE Alu 0 310 1 1684 183 0 0 chr10 96482897 96483187 -43833578 - AluJb SINE Alu -17 295 6 711 147 85 16 chr10 96483414 96483543 -43833222 - FLAM_C SINE Alu 0 143 6 310 26 77 0 chr10 96483759 96483798 -43832967 + LTR8 LTR ERV1 546 587 -104 28 29 0 0 chr10 96483798 96483833 -43832932 + AT_rich Low_complexity Low_complexity 1 35 0 271 81 0 0 chr10 96484015 96484052 -43832713 + AluYb8 SINE Alu 148 184 -124 250 350 17 17 chr10 96484086 96484206 -43832559 - MLT1L LTR MaLR -152 463 344 2270 100 0 0 chr10 96484735 96485036 -43831729 - AluSx SINE Alu -11 301 1 1009 181 0 0 chr10 96485067 96485244 -43831521 - FRAM SINE Alu 0 176 1 1682 148 3 46 chr10 96485248 96485580 -43831185 - AluJo SINE Alu 0 312 1 1695 156 17 0 chr10 96485724 96486019 -43830746 + AluJo SINE Alu 1 300 -12 2097 94 0 0 chr10 96486024 96486301 -43830464 + AluSg SINE Alu 1 277 -33 183 42 0 0 chr10 96486413 96486437 -43830328 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 268 184 9 101 chr10 96486443 96486495 -43830270 + L1MC/D LINE L1 5368 5406 -2402 2024 115 0 10 chr10 96486495 96486791 -43829974 - AluSg SINE Alu -15 295 3 268 184 9 101 chr10 96486791 96486847 -43829918 + L1MC/D LINE L1 5406 5466 -2342 620 186 10 0 chr10 96486878 96486980 -43829785 + FLAM_A SINE Alu 12 114 -28 3141 76 20 54 chr10 96487023 96487402 -43829363 + MLT2A1 LTR ERVL 1 363 -81 1711 96 33 26 chr10 96487402 96487674 -43829091 + AluSg SINE Alu 37 310 0 3141 76 20 54 chr10 96487674 96487754 -43829011 + MLT2A1 LTR ERVL 363 444 0 235 273 0 15 chr10 96487780 96487846 -43828919 + L1MC/D LINE L1 5471 5535 -2273 826 211 303 30 chr10 96487848 96488160 -43828605 + L2 LINE L2 1284 1510 -1804 450 0 0 0 chr10 96488160 96488210 -43828555 + (CA)n Simple_repeat Simple_repeat 2 51 0 826 211 303 30 chr10 96488210 96488329 -43828436 + L2 LINE L2 1510 1833 -1481 2043 133 0 3 chr10 96488334 96488634 -43828131 - AluSx SINE Alu -11 301 3 1216 164 9 14 chr10 96488646 96488866 -43827899 - L1PA16 LINE L1 -6 6160 5942 2244 163 88 63 chr10 96488916 96489703 -43827062 + SVA Other Other 61 866 -520 6348 56 7 72 chr10 96489732 96490970 -43825795 + SVA Other Other 432 1386 0 2177 96 7 3 chr10 96490997 96491300 -43825465 + AluSp SINE Alu 1 304 -9 306 0 0 0 chr10 96491382 96491416 -43825349 + (A)n Simple_repeat Simple_repeat 1 34 0 1528 181 63 0 chr10 96491673 96491960 -43824805 - AluJo SINE Alu -7 305 1 2302 90 0 0 chr10 96492453 96492763 -43824002 + AluSx SINE Alu 1 310 -2 1148 148 12 0 chr10 96492881 96493050 -43823715 + FAM SINE Alu 1 171 -4 725 176 163 19 chr10 96493074 96493462 -43823303 + LTR54B LTR ERV1 1 490 -8 3928 176 112 15 chr10 96494045 96494199 -43822566 - MER21B LTR ERV1 -11 852 714 4530 148 26 39 chr10 96494199 96494365 -43822400 - LTR39 LTR ERV1 0 783 616 2179 94 0 0 chr10 96494365 96494664 -43822101 - AluSx SINE Alu -9 303 5 4530 148 26 39 chr10 96494664 96494862 -43821903 - LTR39 LTR ERV1 -167 616 417 1654 178 17 3 chr10 96494862 96495160 -43821605 + AluSx SINE Alu 1 302 -10 4530 148 26 39 chr10 96495160 96495587 -43821178 - LTR39 LTR ERV1 -366 417 1 3928 176 112 15 chr10 96495587 96495792 -43820973 - MER21B LTR ERV1 -149 714 530 2092 129 3 0 chr10 96495792 96496102 -43820663 + AluSq SINE Alu 1 311 -2 3928 176 112 15 chr10 96496102 96496518 -43820247 - MER21B LTR ERV1 -333 530 1 2079 91 13 19 chr10 96496605 96496913 -43819852 - AluSx SINE Alu -6 306 1 870 138 0 8 chr10 96496954 96497084 -43819681 - FLAM_C SINE Alu -4 129 1 991 241 20 16 chr10 96497126 96497379 -43819386 + MIR SINE MIR 7 260 -2 252 67 0 0 chr10 96497770 96497800 -43818965 + MER21B LTR ERV1 510 539 -324 2009 140 3 0 chr10 96497854 96498162 -43818603 - AluSx SINE Alu -3 309 1 200 233 0 23 chr10 96498216 96498259 -43818506 - MIR SINE MIR -56 152 111 478 214 138 21 chr10 96498549 96498634 -43818131 + MER5A DNA MER1_type 28 102 -87 1893 129 26 0 chr10 96498634 96498936 -43817829 - AluSx SINE Alu -2 310 1 478 214 138 21 chr10 96498936 96498995 -43817770 + MER5A DNA MER1_type 102 189 0 1180 236 60 55 chr10 96499097 96499533 -43817232 - LTR8A LTR ERV1 0 727 290 1132 129 6 0 chr10 96499717 96499888 -43816877 - AluSg/x SINE Alu -7 305 134 2019 117 10 0 chr10 96499888 96500179 -43816586 - AluSx SINE Alu -16 296 3 414 208 43 120 chr10 96500180 96500349 -43816416 - MER87 LTR ERV1 -390 151 1 299 304 10 20 chr10 96501058 96501160 -43815605 - MER5B DNA MER1_type 0 178 78 647 180 172 8 chr10 96501191 96501313 -43815452 + AluJo SINE Alu 4 145 -167 2250 88 10 0 chr10 96501313 96501621 -43815144 + AluSx SINE Alu 2 312 0 1539 191 3 35 chr10 96501658 96501788 -43814977 + AluJo SINE Alu 1 134 -178 2216 99 3 0 chr10 96501788 96502090 -43814675 + AluSx SINE Alu 1 303 -9 1143 162 0 0 chr10 96502100 96502273 -43814492 + FRAM SINE Alu 1 168 -8 838 176 85 0 chr10 96502372 96502525 -43814240 - AluJo SINE Alu -30 282 117 227 61 0 82 chr10 96502727 96502776 -43813989 - Alu SINE Alu -2 301 257 388 111 28 0 chr10 96502876 96502948 -43813817 + (TG)n Simple_repeat Simple_repeat 1 74 0 336 308 17 8 chr10 96502958 96503075 -43813690 - L1MC4a LINE L1 -1876 5932 5815 1865 128 50 4 chr10 96503109 96503390 -43813375 + AluSg SINE Alu 1 294 -16 1872 110 27 107 chr10 96503391 96503518 -43813247 + AluSx SINE Alu 1 137 -175 2159 113 3 0 chr10 96503518 96503800 -43812965 + AluSp SINE Alu 1 283 -30 1872 110 27 107 chr10 96503800 96504009 -43812756 + AluSx SINE Alu 137 310 -2 1576 203 20 45 chr10 96504009 96504204 -43812561 - L1MC4 LINE L1 -14 8028 7830 2327 117 0 0 chr10 96504204 96504513 -43812252 - AluSg SINE Alu -1 309 1 1576 203 20 45 chr10 96504513 96504721 -43812044 - L1MC4 LINE L1 -212 7830 7401 261 0 0 0 chr10 96504721 96504750 -43812015 + (TG)n Simple_repeat Simple_repeat 2 30 0 378 178 39 5 chr10 96504809 96504909 -43811856 - L1MC4a LINE L1 -611 7197 7122 1887 129 97 47 chr10 96504909 96505090 -43811675 - MLT1A1 LTR MaLR -4 361 190 2051 136 7 3 chr10 96505090 96505385 -43811380 - AluSq SINE Alu -17 296 1 1887 129 97 47 chr10 96505385 96505543 -43811222 - MLT1A1 LTR MaLR -174 191 5 2065 142 0 7 chr10 96505547 96505856 -43810909 - AluSx SINE Alu -4 308 2 903 68 8 17 chr10 96506623 96506740 -43810025 + AluSp SINE Alu 17 132 -181 2343 102 3 0 chr10 96506823 96507126 -43809639 + AluSq SINE Alu 2 305 -8 5355 142 47 21 chr10 96507126 96507175 -43809590 - L1M1 LINE L1 -5054 2511 2465 2151 110 7 0 chr10 96507175 96507465 -43809300 - AluSq SINE Alu -17 296 5 5355 142 47 21 chr10 96507465 96508325 -43808440 - L1M1 LINE L1 -5100 2465 1578 2490 97 0 0 chr10 96508769 96509078 -43807687 - AluSx SINE Alu -3 309 1 2513 90 0 0 chr10 96509091 96509403 -43807362 - AluSx SINE Alu 0 312 1 415 227 35 64 chr10 96509454 96509626 -43807139 - LTR41 LTR ERVL -10 763 597 29 28 0 0 chr10 96509734 96509770 -43806995 + AT_rich Low_complexity Low_complexity 1 36 0 2328 61 6 35 chr10 96509771 96510083 -43806682 - AluY SINE Alu -8 303 1 601 195 81 0 chr10 96510089 96510212 -43806553 - AluJo SINE Alu -178 134 2 905 251 137 14 chr10 96510215 96510501 -43806264 + L1M4 LINE L1 5512 5838 -340 708 126 0 0 chr10 96510502 96510605 -43806160 - AluJb SINE Alu 0 312 210 1396 178 0 13 chr10 96510609 96510834 -43805931 + AluJb SINE Alu 1 222 -90 2377 113 0 0 chr10 96510901 96511211 -43805554 + AluSg SINE Alu 1 310 0 2160 114 0 7 chr10 96511236 96511533 -43805232 + AluSg SINE Alu 1 295 -15 1324 153 5 14 chr10 96511545 96511754 -43805011 - AluSp SINE Alu -15 298 92 242 213 41 65 chr10 96512321 96512391 -43804374 - AluJ/FLAM SINE Alu -239 63 5 698 80 89 0 chr10 96512397 96512509 -43804256 + L1MC/D LINE L1 5319 5440 -904 432 244 0 0 chr10 96512512 96512594 -43804171 + FLAM_A SINE Alu 1 82 -60 1026 156 160 37 chr10 96512594 96512698 -43804067 + L1MC2 LINE L1 5696 5786 -558 1904 127 6 40 chr10 96512698 96513021 -43803744 + AluSx SINE Alu 1 312 0 1026 156 160 37 chr10 96513021 96513160 -43803605 + L1MC2 LINE L1 5786 5969 -375 1605 128 8 20 chr10 96513165 96513414 -43803351 + AluSx SINE Alu 50 295 -17 2209 72 72 0 chr10 96513472 96513749 -43803016 + AluSp SINE Alu 1 297 -16 728 104 57 0 chr10 96513751 96513857 -43802908 - LTR54B LTR ERV1 -377 121 10 1488 159 61 64 chr10 96513866 96514103 -43802662 - MER67B LTR ERV1 0 661 424 1629 156 42 10 chr10 96514103 96514391 -43802374 - AluJo SINE Alu -15 297 1 1488 159 61 64 chr10 96514391 96514479 -43802286 - MER67B LTR ERV1 -237 424 337 2316 99 0 0 chr10 96514479 96514771 -43801994 - AluSx SINE Alu -18 294 3 523 151 11 21 chr10 96514871 96514964 -43801801 + AluJ/FLAM SINE Alu 2 93 -219 3925 176 112 15 chr10 96515413 96515567 -43801198 - MER21B LTR ERV1 -11 852 714 4603 145 26 38 chr10 96515567 96515733 -43801032 - LTR39 LTR ERV1 0 783 617 2323 90 0 0 chr10 96515733 96516032 -43800733 - AluSx SINE Alu -9 303 5 4603 145 26 38 chr10 96516032 96516229 -43800536 - LTR39 LTR ERV1 -166 617 419 1761 178 17 3 chr10 96516229 96516527 -43800238 + AluSx SINE Alu 1 302 -10 4603 145 26 38 chr10 96516527 96516954 -43799811 - LTR39 LTR ERV1 -364 419 1 3925 176 112 15 chr10 96516954 96517159 -43799606 - MER21B LTR ERV1 -149 714 530 2188 132 3 0 chr10 96517159 96517469 -43799296 + AluSq SINE Alu 1 311 -2 3925 176 112 15 chr10 96517469 96517885 -43798880 - MER21B LTR ERV1 -333 530 1 2121 98 13 20 chr10 96517972 96518278 -43798487 - AluSx SINE Alu -6 306 3 1795 149 26 13 chr10 96518377 96518685 -43798080 + AluJo SINE Alu 1 312 0 2442 55 0 23 chr10 96518692 96519002 -43797763 + AluY SINE Alu 1 303 -8 279 268 0 0 chr10 96519073 96519144 -43797621 - L1ME LINE L1 -664 5498 5428 407 236 89 8 chr10 96519162 96519285 -43797480 + L1MEc LINE L1 2106 2238 -4158 2444 84 3 0 chr10 96519326 96519636 -43797129 + AluSp SINE Alu 3 313 0 286 248 158 0 chr10 96519638 96519739 -43797026 - L1ME1 LINE L1 -115 6051 5935 * 651 232 112 6 chr10 96519736 96519998 -43796767 - L1ME LINE L1 -727 5439 5157 1515 160 10 55 chr10 96520002 96520113 -43796652 + AluJo SINE Alu 6 120 -192 428 35 17 0 chr10 96520113 96520171 -43796594 + (TA)n Simple_repeat Simple_repeat 1 59 0 2167 77 0 87 chr10 96520171 96520494 -43796271 - AluSq SINE Alu -18 295 1 1515 160 10 55 chr10 96520494 96520693 -43796072 + AluJo SINE Alu 118 303 -9 1157 154 266 0 chr10 96520815 96521048 -43795717 - AluJo SINE Alu -6 296 2 1060 146 0 50 chr10 96521069 96521256 -43795509 - AluSg/x SINE Alu 0 312 134 2307 89 3 10 chr10 96521256 96521549 -43795216 - AluSx SINE Alu -21 291 1 1060 146 0 50 chr10 96521549 96521560 -43795205 - AluSg/x SINE Alu -178 134 124 3055 233 148 50 chr10 96521562 96521624 -43795141 - L1ME LINE L1 -1163 4983 4928 2241 100 3 3 chr10 96521624 96521924 -43794841 - AluSx SINE Alu -12 300 1 3055 233 148 50 chr10 96521924 96522196 -43794569 - L1ME LINE L1 -1218 4928 4684 2040 147 7 0 chr10 96522196 96522488 -43794277 - AluJb SINE Alu -16 296 3 1937 138 3 24 chr10 96522492 96522789 -43793976 - AluJo SINE Alu -20 292 2 3055 233 148 50 chr10 96522789 96523266 -43793499 - L1ME LINE L1 -1464 4682 4253 2278 109 0 3 chr10 96523266 96523570 -43793195 + AluSq SINE Alu 1 303 -10 3055 233 148 50 chr10 96523570 96523726 -43793039 - L1ME LINE L1 -1893 4253 4114 2195 118 13 0 chr10 96523726 96524030 -43792735 - AluSx SINE Alu -4 308 1 2434 85 0 10 chr10 96524033 96524338 -43792427 - AluSg SINE Alu -8 302 1 3055 233 148 50 chr10 96524338 96524845 -43791920 - L1ME LINE L1 -2033 4113 3352 631 235 29 74 chr10 96524909 96525152 -43791613 + L1MC4 LINE L1 7811 8042 0 312 27 0 0 chr10 96525322 96525359 -43791406 + (CAA)n Simple_repeat Simple_repeat 3 39 0 237 203 78 16 chr10 96525456 96525520 -43791245 + L1ME4a LINE L1 5955 6022 -99 1973 78 59 78 chr10 96525562 96525869 -43790896 - AluSx SINE Alu -11 301 1 236 286 29 0 chr10 96526255 96526325 -43790440 + MIR SINE MIR 81 152 -110 2205 112 0 16 chr10 96526362 96526676 -43790089 + AluSx SINE Alu 1 309 -3 2254 121 0 16 chr10 96530326 96530641 -43786124 + AluSx SINE Alu 1 310 -2 2178 123 6 25 chr10 96531689 96532007 -43784758 + AluSx SINE Alu 1 312 0 408 271 16 0 chr10 96532126 96532248 -43784517 - MIR SINE MIR -93 169 46 285 355 151 0 chr10 96532414 96532586 -43784179 - MIR SINE MIR -6 256 59 414 227 104 65 chr10 96533364 96533518 -43783247 + MER103 DNA DNA 6 165 -1 2663 62 0 0 chr10 96533621 96533929 -43782836 - AluSg SINE Alu -2 308 1 683 154 0 0 chr10 96533931 96534041 -43782724 - FLAM_A SINE Alu -13 129 20 2407 80 0 29 chr10 96534954 96535266 -43781499 - AluSg SINE Alu -7 303 1 841 70 93 0 chr10 96535640 96535769 -43780996 + MER30 DNA MER1_type 1 141 -89 2144 132 0 0 chr10 96535981 96536270 -43780495 - AluSx SINE Alu -23 289 1 2135 127 0 3 chr10 96536493 96536785 -43779980 - AluSx SINE Alu -21 291 1 2226 88 3 36 chr10 96536797 96537103 -43779662 - AluY SINE Alu -15 296 1 1453 200 13 13 chr10 96537311 96537616 -43779149 + AluSx SINE Alu 1 305 -7 2208 72 54 4 chr10 96537616 96537895 -43778870 + AluSp SINE Alu 1 293 -20 727 236 77 21 chr10 96537906 96538139 -43778626 + MIR SINE MIR 5 250 -12 942 184 6 0 chr10 96538193 96538361 -43778404 + FRAM SINE Alu 1 169 -7 342 294 59 0 chr10 96538361 96538463 -43778302 - MIR SINE MIR -69 139 32 940 98 0 0 chr10 96539958 96540080 -43776685 - AluSg/x SINE Alu -22 287 166 22 0 0 0 chr10 96540273 96540295 -43776470 + AT_rich Low_complexity Low_complexity 1 22 0 339 164 0 0 chr10 96540295 96540356 -43776409 + (TG)n Simple_repeat Simple_repeat 2 62 0 359 270 0 0 chr10 96540363 96540452 -43776313 + L1MC4 LINE L1 6615 6703 -1339 2180 114 3 13 chr10 96541127 96541434 -43775331 - AluSx SINE Alu -8 304 1 246 214 168 8 chr10 96541539 96541670 -43775095 + L1ME LINE L1 5174 5325 -821 1087 171 22 57 chr10 96541676 96541904 -43774861 + AluJo SINE Alu 1 220 -92 381 148 0 16 chr10 96541904 96541965 -43774800 + AluSg/x SINE Alu 84 143 -157 577 78 0 0 chr10 96542060 96542137 -43774628 + AluSg/x SINE Alu 173 249 -63 1185 154 0 88 chr10 96542138 96542206 -43774559 + AluJo SINE Alu 85 157 -155 2328 97 3 0 chr10 96542206 96542504 -43774261 + AluSp SINE Alu 1 299 -14 1185 154 0 88 chr10 96542504 96542662 -43774103 + AluJo SINE Alu 157 291 -21 496 180 50 22 chr10 96542672 96542811 -43773954 + L1ME LINE L1 5345 5487 -675 430 119 60 0 chr10 96542811 96542878 -43773887 + HY5 scRNA scRNA 1 71 -13 444 193 92 46 chr10 96542897 96542912 -43773853 + L1ME LINE L1 5470 5483 -681 2425 72 0 0 chr10 96542912 96543247 -43773518 + AluY SINE Alu 1 311 0 444 193 92 46 chr10 96543247 96543340 -43773425 + L1ME LINE L1 5483 5583 -581 301 236 127 18 chr10 96543446 96543556 -43773209 + L1ME LINE L1 5566 5687 -483 2238 116 3 0 chr10 96543556 96543857 -43772908 - AluSp SINE Alu -10 303 2 490 128 53 0 chr10 96543888 96543982 -43772783 + AluY SINE Alu 210 308 -3 259 262 0 0 chr10 96544001 96544062 -43772703 - MER5A DNA MER1_type -1 188 128 28 48 0 0 chr10 96544192 96544234 -43772531 + AT_rich Low_complexity Low_complexity 1 42 0 1804 173 3 0 chr10 96544243 96544527 -43772238 + AluJb SINE Alu 1 285 -27 378 0 0 0 chr10 96544549 96544591 -43772174 + (TC)n Simple_repeat Simple_repeat 2 43 0 234 0 0 0 chr10 96544590 96544616 -43772149 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2932 171 39 10 chr10 96544926 96545528 -43771237 + MER39 LTR ERV1 1 707 0 483 204 78 0 chr10 96545528 96545631 -43771134 - MER58 DNA MER1_type -56 285 175 2163 127 3 13 chr10 96545757 96546199 -43770566 - AluSx SINE Alu 0 439 1 2332 91 3 0 chr10 96546204 96546502 -43770263 - AluSx SINE Alu -13 299 1 252 116 23 0 chr10 96546502 96546545 -43770220 - LTR54B LTR ERV1 -280 218 175 1564 137 0 9 chr10 96546597 96546824 -43769941 + AluSx SINE Alu 1 225 -87 180 0 0 0 chr10 96546932 96546952 -43769813 + (A)n Simple_repeat Simple_repeat 1 20 0 2112 143 0 0 chr10 96547016 96547317 -43769448 - AluSx SINE Alu -11 301 1 2413 90 0 3 chr10 96547318 96547619 -43769146 - AluSx SINE Alu -12 300 1 566 161 0 0 chr10 96547657 96547750 -43769015 + AluSx SINE Alu 215 307 -2 1511 184 37 27 chr10 96547779 96548073 -43768692 - AluJo SINE Alu -15 297 1 228 200 20 0 chr10 96550035 96550085 -43766680 + MIR SINE MIR 47 97 -165 1956 133 45 0 chr10 96550131 96550417 -43766348 - AluJo SINE Alu -13 299 1 695 251 59 10 chr10 96550470 96550673 -43766092 - MIR SINE MIR -44 218 6 3365 211 81 7 chr10 96551090 96551944 -43764821 - L1MD3 LINE L1 -13 7982 7066 471 195 11 0 chr10 96551939 96552026 -43764739 + L1MD3 LINE L1 7140 7227 -768 * 472 259 68 12 chr10 96552086 96552248 -43764517 - MIR SINE MIR -90 172 2 1300 116 84 0 chr10 96552414 96552604 -43764161 - AluSg/x SINE Alu -11 299 94 2341 71 20 7 chr10 96553340 96553637 -43763128 - AluSc SINE Alu -8 301 1 2245 62 42 3 chr10 96553642 96553930 -43762835 - AluY SINE Alu -12 299 1 211 452 19 0 chr10 96554092 96554196 -43762569 - L2 LINE L2 -7 3265 3160 2178 117 3 3 chr10 96554399 96554706 -43762059 + AluSx SINE Alu 1 307 -5 1643 171 0 40 chr10 96554766 96555065 -43761700 - AluJb SINE Alu -21 291 5 1054 139 24 14 chr10 96555184 96555393 -43761372 - L1MA5A LINE L1 0 6297 6087 21 71 0 0 chr10 96556497 96556539 -43760226 + AT_rich Low_complexity Low_complexity 1 42 0 1146 117 0 0 chr10 96606704 96606867 -43709898 - AluY SINE Alu -148 163 1 452 270 118 26 chr10 96606878 96607148 -43709617 + L1ME3A LINE L1 5385 5679 -442 1431 161 39 46 chr10 96607252 96607532 -43709233 + AluJo SINE Alu 11 288 -24 200 109 0 43 chr10 96607532 96607578 -43709187 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 318 145 97 0 chr10 96608074 96608136 -43708629 + L2 LINE L2 3242 3309 -4 349 299 65 52 chr10 96608457 96608506 -43708259 - MIR3 SINE MIR -4 204 157 2339 80 3 3 chr10 96608506 96608817 -43707948 + AluSx SINE Alu 1 311 -1 349 299 65 52 chr10 96608817 96608921 -43707844 - MIR3 SINE MIR -51 157 49 1001 123 37 25 chr10 96609079 96609242 -43707523 - AluSq SINE Alu -19 294 130 240 35 0 0 chr10 96609249 96609278 -43707487 + (TTG)n Simple_repeat Simple_repeat 2 30 0 909 221 44 108 chr10 96609473 96609575 -43707190 + L1ME3A LINE L1 5785 5892 -278 2081 100 0 0 chr10 96609575 96609881 -43706884 + AluSx SINE Alu 4 309 0 909 221 44 108 chr10 96609881 96610182 -43706583 + L1ME3A LINE L1 5892 6165 -5 247 264 11 92 chr10 96611353 96611440 -43705325 - L2 LINE L2 -1 3312 3233 330 26 0 0 chr10 96611509 96611548 -43705217 + (TA)n Simple_repeat Simple_repeat 1 39 0 216 0 0 0 chr10 96611556 96611580 -43705185 + (T)n Simple_repeat Simple_repeat 1 24 0 2328 95 0 0 chr10 96611703 96612007 -43704758 - AluSc SINE Alu -5 304 1 501 205 40 80 chr10 96612358 96612509 -43704256 + MIR SINE MIR 103 247 -15 * 721 254 175 24 chr10 96612508 96612839 -43703926 - L2 LINE L2 0 3313 2933 237 188 21 0 chr10 96612870 96612918 -43703847 + MER46C DNA MER2_type 1 49 -289 1677 112 135 11 chr10 96613174 96613441 -43703324 - AluSx SINE Alu 0 302 3 180 0 0 0 chr10 96614061 96614081 -43702684 + (T)n Simple_repeat Simple_repeat 1 20 0 2396 59 13 0 chr10 96614791 96615094 -43701671 - AluY SINE Alu -4 307 1 1901 99 4 0 chr10 96615094 96615357 -43701408 - AluSx SINE Alu -15 297 34 223 243 95 14 chr10 96616829 96616903 -43699862 - MIR3 SINE MIR -16 192 113 523 277 62 23 chr10 96617599 96617776 -43698989 + MER5A DNA MER1_type 1 184 -5 22 70 0 0 chr10 96618829 96618872 -43697893 + AT_rich Low_complexity Low_complexity 1 43 0 244 313 16 0 chr10 96621665 96621793 -43694972 + (CA)n Simple_repeat Simple_repeat 1 130 0 27 29 0 0 chr10 96623791 96623825 -43692940 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 96623901 96623923 -43692842 + GC_rich Low_complexity Low_complexity 1 22 0 247 228 342 0 chr10 96624813 96624892 -43691873 - L2 LINE L2 -5 3308 3203 491 250 221 12 chr10 96625501 96625876 -43690889 + L1MC4 LINE L1 6736 7289 -753 2447 44 0 0 chr10 96625912 96626205 -43690560 + AluY SINE Alu 1 293 -18 282 306 82 7 chr10 96626275 96626422 -43690343 + L1MC4 LINE L1 7761 7918 -124 198 222 0 0 chr10 96626426 96626480 -43690285 + (TA)n Simple_repeat Simple_repeat 1 54 0 14844 117 42 27 chr10 96626485 96626693 -43690072 - Tigger1 DNA MER2_type -12 2406 2203 1268 123 210 12 chr10 96626693 96626936 -43689829 + AluSg1 SINE Alu 1 291 -18 14844 117 42 27 chr10 96626936 96627265 -43689500 - Tigger1 DNA MER2_type -215 2203 1880 646 184 0 37 chr10 96627265 96627401 -43689364 - FLAM_C SINE Alu -1 132 2 14844 117 42 27 chr10 96627401 96629232 -43687533 - Tigger1 DNA MER2_type -538 1880 1 2140 93 3 3 chr10 96629461 96629761 -43687004 - AluY SINE Alu -11 300 1 27 0 0 0 chr10 96630319 96630346 -43686419 + AT_rich Low_complexity Low_complexity 1 27 0 1955 107 50 17 chr10 96631347 96631645 -43685120 - AluSq SINE Alu -5 308 1 4305 164 46 17 chr10 96631766 96632375 -43684390 + L1MB7 LINE L1 5285 5875 -309 1556 90 36 0 chr10 96632375 96632597 -43684168 - MER30 DNA MER1_type 0 230 1 4305 164 46 17 chr10 96632597 96632791 -43683974 + L1MB7 LINE L1 5875 6117 -67 2099 107 3 17 chr10 96632791 96633091 -43683674 - AluSx SINE Alu -16 296 1 4305 164 46 17 chr10 96633091 96633150 -43683615 + L1MB7 LINE L1 6117 6173 -11 2446 60 0 0 chr10 96633160 96633460 -43683305 - AluY SINE Alu -11 300 1 2207 92 0 0 chr10 96633462 96633755 -43683010 - AluSx SINE Alu -19 293 1 2185 95 0 3 chr10 96633756 96634052 -43682713 - AluSx SINE Alu -17 295 1 2222 95 0 0 chr10 96634713 96635007 -43681758 + AluSg SINE Alu 1 294 -16 229 188 45 125 chr10 96635209 96635321 -43681444 + L2 LINE L2 3211 3313 0 3331 135 22 0 chr10 96635350 96635853 -43680912 - L1PA15 LINE L1 -21 6144 5631 517 267 103 36 chr10 96635866 96635913 -43680852 + MIR SINE MIR 49 91 -171 2229 104 0 3 chr10 96635913 96636220 -43680545 - AluSg SINE Alu -4 306 1 517 267 103 36 chr10 96636220 96636367 -43680398 + MIR SINE MIR 91 256 -6 180 217 0 0 chr10 96636374 96636420 -43680345 + (TAA)n Simple_repeat Simple_repeat 1 46 0 195 256 0 0 chr10 96636996 96637039 -43679726 + MIR SINE MIR 72 114 -148 850 131 23 0 chr10 96637239 96637369 -43679396 + AluJb SINE Alu 1 133 -179 478 145 13 0 chr10 96637479 96637555 -43679210 + MSTD LTR MaLR 1 77 -319 2471 88 40 90 chr10 96637605 96638104 -43678661 + SVA Other Other 393 866 -520 6284 69 3 58 chr10 96638206 96639609 -43677156 + SVA Other Other 433 1386 0 1618 191 43 31 chr10 96639629 96639954 -43676811 + MSTD LTR MaLR 68 396 0 1219 224 12 4 chr10 96639956 96640211 -43676554 + MSTD-int LTR MaLR 2 258 -1477 2100 132 0 0 chr10 96640211 96640522 -43676243 + AluSq SINE Alu 1 311 -2 282 299 0 0 chr10 96640522 96640619 -43676146 + MSTD-int LTR MaLR 349 445 -1206 2063 119 0 0 chr10 96640668 96640970 -43675795 - AluSx SINE Alu -10 302 1 1098 225 118 0 chr10 96640974 96641245 -43675520 + MSTD-int LTR MaLR 500 802 -933 615 151 0 11 chr10 96641283 96641376 -43675389 + FRAM SINE Alu 68 159 -17 957 250 52 75 chr10 96641411 96641690 -43675075 + L1MEc LINE L1 1428 1712 -4684 2324 102 0 0 chr10 96641690 96642003 -43674762 + AluSp SINE Alu 1 313 0 957 250 52 75 chr10 96642003 96642025 -43674740 + L1MEc LINE L1 1712 1733 -4663 1921 141 13 7 chr10 96642025 96642324 -43674441 + AluJb SINE Alu 1 301 -11 957 250 52 75 chr10 96642324 96642582 -43674183 + L1MEc LINE L1 1733 1975 -4421 1052 146 6 0 chr10 96642588 96642759 -43674006 - AluSq SINE Alu -16 297 126 934 155 0 7 chr10 96642862 96643017 -43673748 - AluSq SINE Alu -159 154 1 262 77 0 39 chr10 96643020 96643072 -43673693 + (TCTCC)n Simple_repeat Simple_repeat 2 51 0 355 254 93 103 chr10 96643210 96643725 -43673040 + MLT1J LTR MaLR 2 511 0 2209 109 3 3 chr10 96643725 96644064 -43672701 + AluSx SINE Alu 1 339 0 1184 134 6 11 chr10 96644069 96644248 -43672517 + AluSg/x SINE Alu 106 283 -27 1167 307 62 53 chr10 96644513 96645421 -43671344 - L2 LINE L2 -218 3054 2134 1281 159 136 30 chr10 96645627 96645891 -43670874 - AluJo SINE Alu -20 292 1 204 200 0 0 chr10 96646854 96646889 -43669876 + L2 LINE L2 3168 3202 -70 3074 155 65 24 chr10 96646889 96647399 -43669366 - MLT1F1 LTR MaLR -9 558 24 1811 153 7 0 chr10 96647399 96647693 -43669072 - AluJb SINE Alu -16 296 1 3074 155 65 24 chr10 96647693 96647718 -43669047 - MLT1F1 LTR MaLR -543 24 1 313 296 0 0 chr10 96647719 96647790 -43668975 + L2 LINE L2 3197 3267 -5 24 0 0 0 chr10 96648070 96648094 -43668671 + AT_rich Low_complexity Low_complexity 1 24 0 2259 95 3 0 chr10 96648200 96648504 -43668261 + AluSx SINE Alu 1 305 -7 1100 184 0 0 chr10 96648688 96648862 -43667903 - FAM SINE Alu -1 174 1 481 340 61 14 chr10 96648869 96649155 -43667610 + LTR16B LTR ERVL 77 418 -32 650 255 69 29 chr10 96649570 96649774 -43666991 + MIR SINE MIR 14 225 -37 577 257 60 100 chr10 96649776 96650126 -43666639 - LTR67 LTR ERVL 0 557 222 182 257 0 14 chr10 96650141 96650215 -43666550 + C-rich Low_complexity Low_complexity 2 74 0 2218 109 3 0 chr10 96650318 96650630 -43666135 + AluSp SINE Alu 1 313 0 203 108 0 54 chr10 96650666 96650703 -43666062 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 427 320 55 5 chr10 96650721 96650940 -43665825 + L2 LINE L2 1827 2056 -1258 735 267 66 47 chr10 96650968 96651226 -43665539 - MLT1B LTR MaLR -15 375 113 * 1095 110 14 120 chr10 96651222 96651271 -43665494 - MSTC LTR MaLR -14 414 361 2106 122 0 0 chr10 96651271 96651565 -43665200 - AluSx SINE Alu -18 294 1 1095 110 14 120 chr10 96651565 96651724 -43665041 - MSTC LTR MaLR -67 361 228 743 144 0 45 chr10 96651726 96651858 -43664907 - MSTC LTR MaLR -302 126 1 698 185 0 0 chr10 96651858 96651977 -43664788 - MLT1B LTR MaLR -348 119 1 347 291 57 99 chr10 96651978 96652177 -43664588 + L2 LINE L2 2140 2317 -997 1757 164 3 3 chr10 96652177 96652476 -43664289 - AluJo SINE Alu -13 299 1 347 291 57 99 chr10 96652476 96652661 -43664104 + L2 LINE L2 2317 2508 -806 1832 119 60 0 chr10 96652670 96652955 -43663810 - AluSx SINE Alu -10 302 1 360 301 130 14 chr10 96653659 96653805 -43662960 - MIR3 SINE MIR -5 203 41 306 240 96 19 chr10 96653835 96653939 -43662826 - MIR SINE MIR 0 262 151 358 292 17 25 chr10 96654185 96654325 -43662440 + CT-rich Low_complexity Low_complexity 1 238 0 1444 172 24 34 chr10 96654349 96654640 -43662125 + AluJo SINE Alu 22 309 -3 2049 91 0 8 chr10 96654642 96654907 -43661858 + AluSx SINE Alu 26 288 -24 223 37 0 0 chr10 96654907 96654934 -43661831 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 778 71 44 0 chr10 96655073 96655186 -43661579 - L1MB5 LINE L1 -8 6166 6049 2190 108 23 3 chr10 96655186 96655491 -43661274 - AluSq SINE Alu -2 311 1 4972 162 18 58 chr10 96655491 96656215 -43660550 - L1MB5 LINE L1 -10 6164 5413 793 57 28 0 chr10 96656215 96656321 -43660444 - HY1 scRNA scRNA -3 109 1 4972 162 18 58 chr10 96656321 96656505 -43660260 - L1MB5 LINE L1 -761 5413 5223 1261 106 27 0 chr10 96656505 96656693 -43660072 - L1MA4 LINE L1 -11 6289 6097 4972 162 18 58 chr10 96656693 96656940 -43659825 - L1MB5 LINE L1 -951 5223 4958 2407 90 3 6 chr10 96656940 96657251 -43659514 - AluSx SINE Alu -2 310 1 4972 162 18 58 chr10 96657251 96657382 -43659383 - L1MB5 LINE L1 -1216 4958 4823 1211 139 5 11 chr10 96657385 96657572 -43659193 - AluSg/x SINE Alu -4 306 121 2385 69 0 13 chr10 96657576 96657879 -43658886 - AluY SINE Alu -12 299 1 2621 167 5 7 chr10 96658319 96659106 -43657659 - L1P4 LINE L1 -573 5593 4810 1284 225 37 10 chr10 96659110 96659408 -43657357 - L1ME1 LINE L1 -286 5880 5575 555 250 134 12 chr10 96659412 96659571 -43657194 - MLT1C LTR MaLR -4 501 322 1621 152 7 40 chr10 96659571 96659848 -43656917 - AluSx SINE Alu -17 295 28 5437 133 134 19 chr10 96659848 96660885 -43655880 - MER52C LTR ERV1 -11 1267 112 1104 176 109 21 chr10 96660913 96661033 -43655732 - MLT1C LTR MaLR -153 314 206 2174 77 45 0 chr10 96661033 96661319 -43655446 - AluY SINE Alu -3 308 10 1104 176 109 21 chr10 96661319 96661482 -43655283 - MLT1C LTR MaLR -261 206 6 337 215 0 0 chr10 96661487 96661552 -43655213 - L1ME1 LINE L1 -603 5563 5499 798 301 63 30 chr10 96661554 96661853 -43654912 - MLT1K LTR MaLR -268 320 12 422 286 101 31 chr10 96661930 96662026 -43654739 - MIR SINE MIR -17 245 157 2272 109 3 0 chr10 96662026 96662330 -43654435 - AluSx SINE Alu -7 305 1 422 286 101 31 chr10 96662330 96662460 -43654305 - MIR SINE MIR -105 157 3 216 0 0 0 chr10 96662554 96662578 -43654187 + (T)n Simple_repeat Simple_repeat 1 24 0 1107 279 46 27 chr10 96662884 96663253 -43653512 - L1MCc LINE L1 -5949 474 99 2185 99 0 35 chr10 96663304 96663618 -43653147 - AluSq SINE Alu -10 303 1 428 231 16 121 chr10 96663681 96663801 -43652964 - MER103 DNA DNA -2 164 68 2086 127 3 0 chr10 96663801 96664085 -43652680 - AluSq SINE Alu -28 285 1 428 231 16 121 chr10 96664085 96664146 -43652619 - MER103 DNA DNA -98 68 2 2238 128 0 0 chr10 96664424 96664736 -43652029 + AluSx SINE Alu 1 312 0 190 280 178 25 chr10 96666472 96666590 -43650175 - MIR SINE MIR -78 184 49 225 226 48 32 chr10 96666654 96666716 -43650049 + L2 LINE L2 2998 3060 -212 1728 147 3 60 chr10 96666910 96667039 -43649726 + AluJo SINE Alu 1 136 -176 2272 91 7 0 chr10 96667039 96667324 -43649441 - AluSc SINE Alu -22 287 1 1728 147 3 60 chr10 96667324 96667508 -43649257 + AluJo SINE Alu 136 296 -16 681 312 69 4 chr10 96667586 96667817 -43648948 + MIR SINE MIR 17 262 0 254 174 163 23 chr10 96668471 96668557 -43648208 + MIR3 SINE MIR 104 201 -7 331 325 42 30 chr10 96669019 96669185 -43647580 + MER5A DNA MER1_type 21 188 -1 459 289 91 0 chr10 96669283 96669470 -43647295 + MIR SINE MIR 58 261 -1 1776 171 20 13 chr10 96669501 96669618 -43647147 + AluJo SINE Alu 1 116 -196 342 0 0 0 chr10 96669618 96669656 -43647109 + (CA)n Simple_repeat Simple_repeat 2 39 0 1776 171 20 13 chr10 96669656 96669837 -43646928 + AluJo SINE Alu 116 301 -11 1720 162 26 35 chr10 96669938 96670278 -43646487 - MLT1A1 LTR MaLR 0 365 29 306 0 0 0 chr10 96671017 96671051 -43645714 + (TG)n Simple_repeat Simple_repeat 1 34 0 56 48 0 0 chr10 96671205 96671289 -43645476 + GC_rich Low_complexity Low_complexity 1 84 0 1064 185 27 27 chr10 96671305 96671565 -43645200 - AluSx SINE Alu -52 260 1 32 26 0 0 chr10 96671572 96671611 -43645154 + AT_rich Low_complexity Low_complexity 1 39 0 2346 98 0 0 chr10 96671768 96672073 -43644692 + AluY SINE Alu 1 305 -6 1792 33 0 19 chr10 96673681 96673892 -43642873 - AluY SINE Alu -104 207 1 414 145 0 0 chr10 96674589 96674651 -43642114 + FLAM_A SINE Alu 49 110 -32 189 0 0 0 chr10 96674663 96674684 -43642081 + (TAA)n Simple_repeat Simple_repeat 2 22 0 224 270 54 27 chr10 96674899 96674973 -43641792 + MIR3 SINE MIR 110 185 -23 2151 114 31 0 chr10 96675250 96675539 -43641226 - AluSx SINE Alu -14 298 1 2390 95 0 0 chr10 96675540 96675836 -43640929 - AluSq SINE Alu -13 300 5 479 356 72 29 chr10 96675858 96676344 -43640421 + L2 LINE L2 2745 3256 -16 2197 121 3 0 chr10 96676344 96676642 -43640123 + AluSx SINE Alu 1 299 -13 479 356 72 29 chr10 96676642 96676660 -43640105 + L2 LINE L2 3256 3272 0 462 197 34 68 chr10 96677749 96677896 -43638869 + MIR SINE MIR 81 222 -40 651 294 121 48 chr10 96679411 96679958 -43636807 - L1MC4a LINE L1 -1902 5906 5320 595 228 176 80 chr10 96680021 96680407 -43636358 - MLT1L LTR MaLR -4 611 189 1855 158 28 0 chr10 96680426 96680711 -43636054 - AluJo SINE Alu -17 295 3 1988 156 0 0 chr10 96680861 96681165 -43635600 + AluSx SINE Alu 3 306 0 2458 94 0 0 chr10 96681833 96682140 -43634625 - AluSx SINE Alu -5 307 1 658 192 144 39 chr10 96682348 96682577 -43634188 - L1MC4a LINE L1 -1724 4422 4170 2239 115 0 6 chr10 96683267 96683581 -43633184 - AluSx SINE Alu 0 312 1 262 302 22 86 chr10 96683972 96684028 -43632737 + MIR SINE MIR 1 59 -203 2274 102 0 16 chr10 96684028 96684343 -43632422 - AluSx SINE Alu -2 310 1 262 302 22 86 chr10 96684343 96684425 -43632340 + MIR SINE MIR 59 130 -132 194 221 11 126 chr10 96684660 96684755 -43632010 + L3 LINE CR1 933 1016 -561 180 198 279 12 chr10 96684774 96684860 -43631905 - MIR3 SINE MIR -7 201 93 1746 176 44 0 chr10 96684914 96685233 -43631532 - L1MB5 LINE L1 0 6174 5842 293 285 160 47 chr10 96685234 96685527 -43631238 - L1ME4a LINE L1 -37 6084 5754 1958 138 0 3 chr10 96685527 96685837 -43630928 + AluSx SINE Alu 1 309 0 293 285 160 47 chr10 96685837 96685851 -43630914 - L1ME4a LINE L1 -367 5754 5743 438 296 49 0 chr10 96686103 96686245 -43630520 + MIR3 SINE MIR 20 168 -40 392 181 28 0 chr10 96686597 96686669 -43630096 + L1MD3 LINE L1 7733 7806 -189 1268 221 5 49 chr10 96686669 96687019 -43629746 + MLT2B1 LTR ERVL 1 416 -104 2066 122 3 3 chr10 96687021 96687307 -43629458 + AluSx SINE Alu 1 286 -26 1366 164 141 4 chr10 96687668 96687937 -43628828 + AluJo SINE Alu 7 312 0 4250 203 31 52 chr10 96688088 96688541 -43628224 + L1M4 LINE L1 348 809 -5837 180 0 0 0 chr10 96688541 96688561 -43628204 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4250 203 31 52 chr10 96688561 96689657 -43627108 + L1M4 LINE L1 809 1879 -4767 519 194 34 22 chr10 96689668 96689829 -43626936 + L1M4 LINE L1 2050 2305 -4341 277 344 16 32 chr10 96690047 96690236 -43626529 + L2 LINE L2 2372 2557 -757 608 369 5 0 chr10 96690239 96690453 -43626312 + MLT1J LTR MaLR 5 219 -292 962 271 65 17 chr10 96690500 96690791 -43625974 + MLT1J LTR MaLR 205 509 -2 401 306 50 22 chr10 96690816 96690996 -43625769 + L2 LINE L2 2574 2758 -556 186 43 0 0 chr10 96691005 96691028 -43625737 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1816 159 3 3 chr10 96691047 96691348 -43625417 - AluJo SINE Alu -11 301 1 470 117 13 0 chr10 96691613 96691690 -43625075 + L1MC3 LINE L1 7708 7785 0 1109 106 0 7 chr10 96691700 96691851 -43624914 + AluSq/x SINE Alu 1 150 -163 259 125 42 21 chr10 96691851 96691899 -43624866 + AluY SINE Alu 219 267 -34 1717 178 13 3 chr10 96692062 96692366 -43624399 - AluJb SINE Alu -5 307 1 252 309 82 10 chr10 96692460 96692557 -43624208 + MER91A DNA MER1_type 2 105 -91 828 242 7 0 chr10 96693044 96693197 -43623568 + MER63A DNA MER1_type 57 210 0 327 245 151 79 chr10 96693227 96693366 -43623399 + Charlie8 DNA MER1_type 4 112 -2305 359 200 0 12 chr10 96693371 96693456 -43623309 + (TA)n Simple_repeat Simple_repeat 2 85 0 215 410 0 0 chr10 96693501 96693596 -43623169 - MIR SINE MIR -84 124 30 1905 225 85 79 chr10 96693900 96694748 -43622017 - HAL1b LINE L1 -56 1292 440 1181 181 147 11 chr10 96695017 96695283 -43621482 + AluJo SINE Alu 1 302 0 333 261 54 9 chr10 96695291 96695402 -43621363 - HAL1b LINE L1 -953 395 280 245 206 55 0 chr10 96695415 96695488 -43621277 - HAL1b LINE L1 -1189 159 83 1918 166 0 0 chr10 96695559 96695873 -43620892 + AluSx SINE Alu 1 314 0 192 217 0 22 chr10 96696406 96696452 -43620313 - MIR SINE MIR -1 261 217 494 265 77 18 chr10 96696489 96696659 -43620106 - MIR SINE MIR -34 228 49 430 196 109 22 chr10 96696777 96696915 -43619850 + L1MC5 LINE L1 7706 7855 -106 2426 141 16 3 chr10 96697560 96697944 -43618821 + MLT1B LTR MaLR 2 390 0 25 51 0 0 chr10 96698051 96698090 -43618675 + AT_rich Low_complexity Low_complexity 1 39 0 2323 117 7 0 chr10 96698194 96698317 -43618448 + AluSx SINE Alu 1 122 -190 207 0 0 0 chr10 96698317 96698340 -43618425 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2323 117 7 0 chr10 96698340 96698525 -43618240 + AluSx SINE Alu 122 311 -1 654 298 31 26 chr10 96698748 96698976 -43617789 + MIR SINE MIR 3 231 -31 335 243 149 28 chr10 96699222 96699329 -43617436 - L2 LINE L2 0 3313 3194 805 298 52 9 chr10 96699977 96700052 -43616713 + L1M4 LINE L1 4407 4477 -1669 1363 187 23 95 chr10 96700052 96700443 -43616322 + MLT1A1 LTR MaLR 1 363 -2 805 298 52 9 chr10 96700443 96700787 -43615978 + L1M4 LINE L1 4477 4844 -1302 803 176 33 33 chr10 96700798 96700951 -43615814 + AluJo SINE Alu 22 174 -138 836 225 6 0 chr10 96700952 96701121 -43615644 + AluJo/FRAM SINE Alu 137 306 -6 225 275 150 18 chr10 96701273 96701476 -43615289 + L1M4 LINE L1 5083 5332 -814 1824 181 0 22 chr10 96701476 96701791 -43614974 + AluJo SINE Alu 1 308 -4 225 275 150 18 chr10 96701791 96701860 -43614905 + L1M4 LINE L1 5332 5391 -755 2262 114 0 3 chr10 96701860 96702167 -43614598 + AluSx SINE Alu 1 306 -6 2583 87 20 0 chr10 96702168 96702513 -43614252 + LTR1 LTR ERV1 434 785 0 1933 138 7 0 chr10 96703098 96703406 -43613359 + AluSx SINE Alu 5 314 0 366 232 92 42 chr10 96703585 96703727 -43613038 + MIR SINE MIR 32 180 -82 244 147 0 0 chr10 96703827 96703861 -43612904 + Alu SINE Alu 242 275 -26 2319 97 7 0 chr10 96703861 96704160 -43612605 - AluSp SINE Alu -12 301 1 383 262 39 0 chr10 96704160 96704263 -43612502 + L1MEc LINE L1 1978 2084 -4312 1829 234 99 10 chr10 96704268 96704990 -43611775 + L1MEc LINE L1 2111 2856 -3359 318 63 14 27 chr10 96705153 96705218 -43611547 - U2 snRNA snRNA -125 63 1 235 177 65 0 chr10 96705218 96705280 -43611485 + L1MEc LINE L1 2934 2999 -3216 1037 152 35 51 chr10 96705283 96705415 -43611350 + AluJo SINE Alu 10 140 -172 1504 203 3 10 chr10 96705415 96705711 -43611054 + AluJb SINE Alu 1 294 -18 1037 152 35 51 chr10 96705711 96705775 -43610990 + AluJo SINE Alu 140 203 -109 209 254 18 0 chr10 96705775 96705830 -43610935 + (TA)n Simple_repeat Simple_repeat 1 56 0 3955 230 68 73 chr10 96705832 96706612 -43610153 - L1M4c LINE L1 -3123 3521 2738 2203 109 7 0 chr10 96706612 96706905 -43609860 - AluSg SINE Alu -15 295 1 3955 230 68 73 chr10 96706905 96708622 -43608143 - L1M4c LINE L1 -3906 2738 1071 1989 162 7 0 chr10 96708622 96708925 -43607840 - AluSx SINE Alu -7 305 1 3955 230 68 73 chr10 96708925 96709394 -43607371 - L1M4c LINE L1 -5573 1071 601 2279 101 3 0 chr10 96709400 96709697 -43607068 - AluSq SINE Alu -15 298 1 1092 95 0 0 chr10 96709698 96709835 -43606930 - AluSq/x SINE Alu -175 137 1 2019 238 27 74 chr10 96709835 96710067 -43606698 - L1M4c LINE L1 -5938 604 363 1834 173 7 0 chr10 96710067 96710367 -43606398 - AluJo SINE Alu -10 302 1 2019 238 27 74 chr10 96710367 96710768 -43605997 - L1M4c LINE L1 -6179 363 1 290 301 68 27 chr10 96710768 96710882 -43605883 - L1MDa LINE L1 -4676 1864 1756 1577 167 0 4 chr10 96710882 96711134 -43605631 - AluJo SINE Alu -16 296 46 290 301 68 27 chr10 96711134 96711238 -43605527 - L1MDa LINE L1 -4784 1756 1637 1226 224 41 50 chr10 96711238 96711577 -43605188 + MLT1A2 LTR MaLR 1 336 -38 1824 145 28 0 chr10 96711577 96711860 -43604905 + AluSx SINE Alu 1 291 -21 698 269 26 0 chr10 96711994 96712187 -43604578 - L1 LINE L1 -2608 3538 3341 983 201 23 0 chr10 96712209 96712428 -43604337 - L1 LINE L1 -3046 3100 2877 279 0 0 0 chr10 96712445 96712476 -43604289 + (TG)n Simple_repeat Simple_repeat 1 31 0 1323 66 6 0 chr10 96712477 96712644 -43604121 - AluSq SINE Alu -15 298 131 575 245 69 27 chr10 96712674 96712862 -43603903 + L2 LINE L2 2919 3114 -199 983 152 152 5 chr10 96712873 96713071 -43603694 - AluJo SINE Alu -1 311 85 424 156 16 0 chr10 96713071 96713135 -43603630 - AluSx SINE Alu -62 247 183 * 572 95 0 14 chr10 96713129 96713203 -43603562 - AluSx SINE Alu -172 141 69 1249 186 0 5 chr10 96713203 96713407 -43603358 - AluSx SINE Alu -109 203 1 507 229 56 108 chr10 96713408 96713622 -43603143 + L2 LINE L2 3111 3313 0 266 260 82 0 chr10 96714519 96714592 -43602173 - L2 LINE L2 -9 3263 3185 597 191 59 33 chr10 96714845 96714997 -43601768 + MIR SINE MIR 107 262 0 2581 59 3 0 chr10 96715102 96715405 -43601360 - AluSp SINE Alu -9 304 1 795 176 0 37 chr10 96715483 96715619 -43601146 + FLAM_C SINE Alu 1 131 -2 23 0 0 0 chr10 96716209 96716232 -43600533 + AT_rich Low_complexity Low_complexity 1 23 0 2333 94 3 0 chr10 96716387 96716696 -43600069 - AluSq SINE Alu -3 310 1 1418 101 0 0 chr10 96717492 96717671 -43599094 + AluSx SINE Alu 1 179 -133 28 29 0 0 chr10 96717722 96717757 -43599008 + AT_rich Low_complexity Low_complexity 1 35 0 727 203 0 36 chr10 96717757 96717895 -43598870 - FLAM_A SINE Alu 0 133 1 2306 90 0 3 chr10 96718066 96718356 -43598409 - AluSc SINE Alu -20 289 1 342 0 0 0 chr10 96718886 96718924 -43597841 + (GA)n Simple_repeat Simple_repeat 2 39 0 231 36 0 0 chr10 96718923 96718951 -43597814 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 24 0 0 0 chr10 96718951 96718975 -43597790 + GC_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 96719014 96719037 -43597728 + GC_rich Low_complexity Low_complexity 1 23 0 21 67 0 0 chr10 96719178 96719208 -43597557 + AT_rich Low_complexity Low_complexity 1 30 0 237 33 0 0 chr10 96719255 96719285 -43597480 + (TG)n Simple_repeat Simple_repeat 2 31 0 2324 97 0 0 chr10 96719677 96719975 -43596790 - AluSq SINE Alu -15 298 1 203 357 64 18 chr10 96720505 96720676 -43596089 + MIR3 SINE MIR 5 183 -25 2228 72 18 0 chr10 96721144 96721443 -43595322 - AluY SINE Alu 0 306 3 1115 127 0 0 chr10 96721604 96721754 -43595011 + AluSp SINE Alu 118 267 -46 29 47 0 0 chr10 96721758 96721801 -43594964 + AT_rich Low_complexity Low_complexity 1 43 0 233 75 25 0 chr10 96721971 96722011 -43594754 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1924 156 0 7 chr10 96722013 96722308 -43594457 - AluJb SINE Alu -19 293 1 26 0 0 0 chr10 96723220 96723246 -43593519 + AT_rich Low_complexity Low_complexity 1 26 0 1659 167 29 36 chr10 96723576 96723882 -43592883 + AluJb SINE Alu 5 308 -4 405 0 0 0 chr10 96723892 96723937 -43592828 + (CA)n Simple_repeat Simple_repeat 2 46 0 2088 106 3 0 chr10 96723972 96724256 -43592509 - AluSq SINE Alu -17 296 12 1426 186 49 33 chr10 96724641 96724824 -43591941 - AluJo SINE Alu -1 311 120 180 0 0 0 chr10 96724824 96724844 -43591921 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1426 186 49 33 chr10 96724844 96724966 -43591799 - AluJo SINE Alu -192 120 1 815 120 0 0 chr10 96724993 96725101 -43591664 + AluJb SINE Alu 2 109 -203 1308 227 3 0 chr10 96725201 96725505 -43591260 - L1P LINE L1 -1625 4521 4217 1776 139 60 7 chr10 96725511 96725792 -43590973 + AluSx SINE Alu 1 296 -16 1965 175 58 32 chr10 96725822 96726207 -43590558 - L1MB7 LINE L1 -3 6181 5781 2255 109 3 0 chr10 96726207 96726509 -43590256 - AluSg SINE Alu -7 303 1 1965 175 58 32 chr10 96726509 96726570 -43590195 - L1MB7 LINE L1 -403 5781 5723 1632 168 45 7 chr10 96726570 96726861 -43589904 - AluJo SINE Alu 0 312 11 2884 190 131 22 chr10 96727453 96728100 -43588665 - L1MB8 LINE L1 0 6178 5394 2283 123 0 0 chr10 96728100 96728410 -43588355 - AluSg SINE Alu 0 310 1 2884 190 131 22 chr10 96728410 96728686 -43588079 - L1MB8 LINE L1 -784 5394 5150 1580 201 146 14 chr10 96728658 96728735 -43588030 - L1MD2 LINE L1 0 6359 6293 * 2233 116 7 3 chr10 96728735 96729038 -43587727 + AluSx SINE Alu 1 304 -8 1580 201 146 14 chr10 96729038 96729378 -43587387 - L1MD2 LINE L1 -66 6293 5887 2111 103 0 7 chr10 96729380 96729688 -43587077 - AluSg SINE Alu 0 307 2 2254 163 39 32 chr10 96729688 96730154 -43586611 - L1MD2 LINE L1 -531 5828 5360 210 150 33 17 chr10 96730155 96730215 -43586550 + (TA)n Simple_repeat Simple_repeat 2 62 0 607 200 149 42 chr10 96730215 96730430 -43586335 - L1MC5 LINE L1 -475 7486 7249 2599 68 0 0 chr10 96730442 96730752 -43586013 - AluY SINE Alu -1 310 1 1214 198 79 72 chr10 96730753 96730946 -43585819 - L1MC5 LINE L1 -880 7081 6891 2465 125 19 30 chr10 96730946 96731314 -43585451 - THE1B LTR MaLR 0 364 1 1214 198 79 72 chr10 96731314 96731549 -43585216 - L1MC5 LINE L1 -1070 6891 6650 1389 146 0 5 chr10 96731983 96732189 -43584576 - AluJb SINE Alu -21 291 87 924 239 30 107 chr10 96732228 96732365 -43584400 - L1MD2 LINE L1 -2 6357 6211 2035 133 7 3 chr10 96732365 96732665 -43584100 + AluSp SINE Alu 1 301 -12 924 239 30 107 chr10 96732665 96732705 -43584060 - L1MD2 LINE L1 -148 6211 6170 2429 86 0 0 chr10 96732705 96733008 -43583757 + AluSq SINE Alu 1 303 -10 924 239 30 107 chr10 96733008 96733079 -43583686 - L1MD2 LINE L1 -189 6170 6095 2174 164 128 13 chr10 96733079 96733463 -43583302 - MSTA LTR MaLR 0 428 1 924 239 30 107 chr10 96733463 96733642 -43583123 - L1MD2 LINE L1 -264 6095 5961 5435 122 15 34 chr10 96734256 96734598 -43582167 - L1PA15 LINE L1 0 6165 5818 1923 147 6 26 chr10 96734598 96734911 -43581854 - AluSx SINE Alu -5 307 1 5435 122 15 34 chr10 96734911 96735145 -43581620 - L1PA15 LINE L1 -347 5818 5581 2206 112 3 0 chr10 96735145 96735441 -43581324 - AluSx SINE Alu -15 297 1 5435 122 15 34 chr10 96735441 96735723 -43581042 - L1PA15 LINE L1 -584 5581 5322 2262 91 10 7 chr10 96735723 96736021 -43580744 - AluSq SINE Alu -14 299 1 4174 187 26 2 chr10 96736027 96736846 -43579919 + L1P LINE L1 4217 5054 -1092 2378 77 3 13 chr10 96737123 96737434 -43579331 - AluY SINE Alu -3 308 1 374 269 114 91 chr10 96737749 96738013 -43578752 - HAL1 LINE L1 -1351 1156 887 291 295 95 75 chr10 96738050 96738355 -43578410 - HAL1 LINE L1 -1704 803 493 561 199 338 0 chr10 96738441 96738592 -43578173 + MER20 DNA MER1_type 18 219 0 280 312 64 16 chr10 96738669 96738794 -43577971 - HAL1 LINE L1 -2127 380 250 2305 92 0 10 chr10 96739360 96739654 -43577111 - AluSg SINE Alu -19 291 1 1792 147 10 22 chr10 96739976 96740289 -43576476 - AluJo SINE Alu -3 309 1 2413 75 7 3 chr10 96740958 96741263 -43575502 + AluSp SINE Alu 1 306 -7 927 106 0 8 chr10 96741378 96741501 -43575264 + AluSq/x SINE Alu 3 124 -188 1258 200 92 58 chr10 96741913 96742040 -43574725 + MER113 DNA MER1_type? 1 122 -399 2196 129 3 0 chr10 96742040 96742349 -43574416 + AluSq SINE Alu 2 311 -2 1258 200 92 58 chr10 96742349 96742536 -43574229 + MER113 DNA MER1_type? 122 337 -184 2233 130 0 0 chr10 96742536 96742843 -43573922 + AluSx SINE Alu 1 307 -5 1258 200 92 58 chr10 96742843 96742962 -43573803 + MER113 DNA MER1_type? 337 450 -71 392 285 56 21 chr10 96743262 96743406 -43573359 + MIR SINE MIR 99 247 -15 1572 122 36 0 chr10 96744535 96744756 -43572009 + MER30 DNA MER1_type 2 230 0 1231 152 57 14 chr10 96744764 96744974 -43571791 - MER20 DNA MER1_type 0 219 1 220 224 20 0 chr10 96745144 96745193 -43571572 + CT-rich Low_complexity Low_complexity 3 52 0 2114 114 3 7 chr10 96745361 96745679 -43571086 + AluSx SINE Alu 1 312 0 818 191 0 0 chr10 96745692 96745818 -43570947 + FLAM_C SINE Alu 2 127 -16 446 294 184 0 chr10 96745965 96746128 -43570637 - MIR SINE MIR -59 203 11 645 181 0 0 chr10 96746568 96746701 -43570064 + CT-rich Low_complexity Low_complexity 3 135 0 1844 113 75 10 chr10 96746704 96746997 -43569768 - AluSx SINE Alu 0 312 1 477 280 214 39 chr10 96746997 96747250 -43569515 + L2 LINE L2 2831 3038 -275 1673 138 58 0 chr10 96747250 96747510 -43569255 - AluSx SINE Alu -37 275 1 477 280 214 39 chr10 96747510 96747667 -43569098 + L2 LINE L2 3038 3313 0 363 216 40 32 chr10 96747721 96747847 -43568918 - L1MC4 LINE L1 -9 8033 7832 181 286 36 0 chr10 96747892 96747948 -43568817 - MIR SINE MIR 0 262 205 2030 102 48 10 chr10 96747948 96748310 -43568455 - AluSg SINE Alu 0 373 1 294 269 107 27 chr10 96748310 96748459 -43568306 - MIR SINE MIR -49 213 53 434 294 0 10 chr10 96748667 96748769 -43567996 - L2 LINE L2 -11 3302 3202 605 281 26 0 chr10 96749073 96749226 -43567539 + MER91A DNA MER1_type 1 157 -39 470 336 104 0 chr10 96749755 96749966 -43566799 - MIR SINE MIR -2 260 28 2290 110 7 0 chr10 96749972 96750282 -43566483 + AluSx SINE Alu 1 312 0 393 285 58 7 chr10 96751060 96751197 -43565568 - MIR SINE MIR 0 262 119 510 250 16 0 chr10 96751202 96751326 -43565439 + L1MA9 LINE L1 6018 6143 -169 961 207 0 0 chr10 96751328 96751507 -43565258 - AluJb SINE Alu -4 308 130 264 30 0 0 chr10 96751520 96751553 -43565212 + (CA)n Simple_repeat Simple_repeat 2 34 0 * 294 29 0 0 chr10 96751552 96751587 -43565178 + (GA)n Simple_repeat Simple_repeat 2 36 0 246 575 0 75 chr10 96751588 96751774 -43564991 + AluYb8 SINE Alu 137 308 0 464 184 24 88 chr10 96751792 96751917 -43564848 + L1MA9 LINE L1 6160 6276 -36 503 221 26 0 chr10 96751924 96752037 -43564728 - MIR SINE MIR -136 126 11 2472 87 3 0 chr10 96752572 96752882 -43563883 + AluSx SINE Alu 1 311 -1 1739 168 10 7 chr10 96752953 96753262 -43563503 + AluJo SINE Alu 1 310 -2 190 295 103 13 chr10 96753375 96753453 -43563312 - MIR SINE MIR -57 205 121 301 288 0 25 chr10 96753508 96753588 -43563177 - MIR SINE MIR -86 122 45 408 276 31 55 chr10 96753647 96753810 -43562955 - MIR SINE MIR 0 262 104 1777 168 4 0 chr10 96753820 96754100 -43562665 + AluSx SINE Alu 1 281 -31 260 127 32 63 chr10 96754101 96754164 -43562601 - Alu SINE Alu 0 302 242 1530 51 0 0 chr10 96754756 96754934 -43561831 - AluYb8 SINE Alu -140 178 1 2208 110 3 0 chr10 96754956 96755248 -43561517 - AluSx SINE Alu -19 293 1 1606 99 0 9 chr10 96755446 96755657 -43561108 - AluSg/x SINE Alu -19 291 83 21 0 0 0 chr10 96756490 96756511 -43560254 + AT_rich Low_complexity Low_complexity 1 21 0 2335 58 14 0 chr10 96757248 96757557 -43559208 - AluY SINE Alu 0 313 1 1719 117 0 17 chr10 96757609 96757848 -43558917 - AluSx SINE Alu -77 235 1 757 128 17 0 chr10 96758613 96758727 -43558038 - Tigger1 DNA MER2_type -1 2417 2302 252 135 0 0 chr10 96758727 96758764 -43558001 + Alu SINE Alu 1 37 -265 1488 189 75 0 chr10 96758770 96759077 -43557688 - Tigger1 DNA MER2_type -2088 330 1 2175 103 34 0 chr10 96759618 96759910 -43556855 + AluSq SINE Alu 1 302 -11 29 47 0 0 chr10 96759941 96759984 -43556781 + AT_rich Low_complexity Low_complexity 1 43 0 2428 88 0 0 chr10 96760025 96760331 -43556434 + AluSx SINE Alu 1 306 -6 216 209 47 101 chr10 96761443 96761591 -43555174 - MIR SINE MIR -14 248 109 1863 142 13 30 chr10 96762719 96763022 -43553743 + AluJo SINE Alu 1 298 -14 230 79 0 0 chr10 96763338 96763376 -43553389 + L1MC4 LINE L1 8005 8042 0 222 219 0 0 chr10 96763439 96763480 -43553285 + (TATATG)n Simple_repeat Simple_repeat 6 46 0 567 203 54 7 chr10 96763485 96763633 -43553132 - L1MC4a LINE L1 -1283 6525 6371 644 212 166 5 chr10 96763633 96763826 -43552939 + MER58A DNA MER1_type 1 224 0 2479 68 3 0 chr10 96763834 96764143 -43552622 - AluY SINE Alu -1 310 1 1877 118 3 73 chr10 96764146 96764461 -43552304 - AluSx SINE Alu -19 293 1 274 246 42 8 chr10 96764536 96764654 -43552111 - L1M4 LINE L1 -1092 5054 4933 2910 190 65 24 chr10 96764761 96765814 -43550951 - L1MDb LINE L1 -4550 1856 757 1764 252 28 0 chr10 96765814 96766314 -43550451 - L1MEc LINE L1 -3448 2978 2465 2205 132 0 0 chr10 96766320 96766624 -43550141 - AluSx SINE Alu -8 304 1 310 259 86 26 chr10 96766624 96766740 -43550025 - L1MEc LINE L1 -4234 2373 2251 239 272 103 0 chr10 96766750 96766886 -43549879 - L1MEc LINE L1 -4214 2212 2063 351 162 0 14 chr10 96766947 96766968 -43549797 + Charlie5 DNA MER1_type 2513 2533 -52 1989 87 4 4 chr10 96766968 96767221 -43549544 - AluSg SINE Alu -11 299 47 351 162 0 14 chr10 96767221 96767273 -43549492 + Charlie5 DNA MER1_type 2533 2585 0 2122 130 0 10 chr10 96767724 96768031 -43548734 - AluSx SINE Alu -8 304 1 425 219 105 0 chr10 96768829 96768934 -43547831 + MIR SINE MIR 19 134 -128 2454 80 0 7 chr10 96769549 96769850 -43546915 - AluSg SINE Alu -11 299 1 1318 213 74 116 chr10 96770083 96770919 -43545846 + L1MC5 LINE L1 6719 7519 -442 564 221 8 0 chr10 96770929 96771051 -43545714 - MER94 DNA DNA -8 126 4 747 207 126 51 chr10 96771051 96771423 -43545342 + L1MC5 LINE L1 7513 7912 -49 1918 146 31 0 chr10 96771433 96771721 -43545044 + AluJb SINE Alu 1 297 -15 474 168 44 0 chr10 96772614 96772727 -43544038 + L1MB7 LINE L1 6062 6179 -5 673 129 10 0 chr10 96772961 96773062 -43543703 + AluJ/FLAM SINE Alu 1 102 -210 228 242 97 24 chr10 96773078 96773202 -43543563 + MARNA DNA Mariner 38 170 -416 * 425 225 157 22 chr10 96773112 96773290 -43543475 - MARNA DNA Mariner -75 511 310 21 0 0 0 chr10 96773364 96773385 -43543380 + AT_rich Low_complexity Low_complexity 1 21 0 2048 108 39 7 chr10 96774684 96774970 -43541795 - AluSx SINE Alu -17 295 1 1365 149 30 107 chr10 96774980 96775308 -43541457 - AluYb8 SINE Alu -15 303 1 822 142 0 64 chr10 96775611 96775752 -43541013 - FLAM_C SINE Alu 0 133 2 2344 87 3 0 chr10 96775782 96776082 -43540683 - AluSp SINE Alu -12 301 1 21 36 0 0 chr10 96776689 96776717 -43540048 + AT_rich Low_complexity Low_complexity 1 28 0 766 210 36 62 chr10 96776814 96777038 -43539727 - MER20 DNA MER1_type 0 219 2 1952 120 31 10 chr10 96777544 96777836 -43538929 + AluSx SINE Alu 1 298 -14 2589 249 123 50 chr10 96779415 96779702 -43537063 + L1M4 LINE L1 2 267 -6377 1994 121 38 0 chr10 96779702 96779991 -43536774 - AluSx SINE Alu -12 300 1 2589 249 123 50 chr10 96779991 96780610 -43536155 + L1M4 LINE L1 267 839 -5805 1791 158 10 31 chr10 96780610 96780902 -43535863 + AluJo SINE Alu 1 286 -26 2589 249 123 50 chr10 96780902 96781617 -43535148 + L1M4 LINE L1 839 1856 -4788 2907 158 52 24 chr10 96781622 96781739 -43535026 + L1MB5 LINE L1 5410 5522 -652 1894 145 0 52 chr10 96781739 96782049 -43534716 - AluSx SINE Alu -18 294 1 2907 158 52 24 chr10 96782049 96782570 -43534195 + L1MB5 LINE L1 5522 6066 -108 1869 112 4 0 chr10 96782570 96782820 -43533945 + AluSx SINE Alu 21 271 -41 7460 153 58 8 chr10 96882846 96884333 -43432432 + L1PA16 LINE L1 1390 2950 -3899 4371 200 63 4 chr10 96884385 96886204 -43430561 + L1PA16 LINE L1 4934 6861 -8 686 96 11 0 chr10 96886209 96886303 -43430462 + L1P LINE L1 7 101 -6045 5291 211 19 7 chr10 96886438 96888157 -43428608 - L1MDa LINE L1 -2608 4957 3221 472 302 64 39 chr10 96888158 96888363 -43428402 - L1MDa LINE L1 -4822 2743 2479 1201 285 51 21 chr10 96888365 96889085 -43427680 - L1MDa LINE L1 -5170 2576 1835 34 55 0 0 chr10 96889103 96889158 -43427607 + AT_rich Low_complexity Low_complexity 1 55 0 2012 205 77 8 chr10 96889189 96889696 -43427069 + LTR1B LTR ERV1 285 826 0 633 312 35 17 chr10 96889873 96890104 -43426661 + MIR SINE MIR 2 236 -26 8557 157 23 24 chr10 96890202 96891810 -43424955 + L1P LINE L1 11 1617 -4529 7098 55 2 0 chr10 96891810 96893045 -43423720 + L1PA6 LINE L1 4911 6150 -4 382 280 91 14 chr10 96893304 96893447 -43423318 - L2 LINE L2 -2 3311 3158 428 283 20 26 chr10 96893456 96893608 -43423157 + MIR SINE MIR 7 157 -105 660 217 113 20 chr10 96893639 96893842 -43422923 + MLT1D LTR MaLR 139 360 -145 265 308 34 0 chr10 96894148 96894265 -43422500 + (TA)n Simple_repeat Simple_repeat 2 122 0 1321 126 0 0 chr10 96894541 96894723 -43422042 + AluSq SINE Alu 1 182 -131 607 143 10 0 chr10 96894823 96894921 -43421844 + AluSg/x SINE Alu 197 295 -14 342 204 0 0 chr10 96895850 96895938 -43420827 + (TGGA)n Simple_repeat Simple_repeat 2 89 0 234 239 0 0 chr10 96896000 96896046 -43420719 - L2 LINE L2 -3 3310 3265 876 257 53 53 chr10 96896581 96896939 -43419826 + MLT1A1 LTR MaLR 1 358 -7 452 18 18 0 chr10 96896967 96897024 -43419741 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1960 150 131 8 chr10 96897030 96897411 -43419354 + MSTA LTR MaLR 1 428 0 1837 40 0 0 chr10 96898761 96898984 -43417781 + L1PA4 LINE L1 5930 6152 -3 273 281 39 8 chr10 96898995 96899123 -43417642 - L1M3de LINE L1 -4667 1986 1855 210 37 0 0 chr10 96899123 96899150 -43417615 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 10663 44 1 0 chr10 96899312 96901406 -43415359 + L1PA4 LINE L1 4075 6170 0 1111 47 0 33 chr10 96901634 96901815 -43414950 + L1PA3 LINE L1 6010 6155 0 719 278 81 54 chr10 96901818 96902508 -43414257 + L1MC4 LINE L1 7141 7849 -193 12897 31 4 2 chr10 96902804 96904441 -43412324 - L1P LINE L1 -1855 4291 2652 8634 26 0 6 chr10 96904429 96905313 -43411452 + L1P LINE L1 4123 5001 -1145 * 2763 23 0 0 chr10 96905313 96905618 -43411147 - AluYa5 SINE Alu -6 305 1 8634 26 0 6 chr10 96905618 96905814 -43410951 + L1P LINE L1 5001 5197 -949 338 143 29 0 chr10 96905964 96906034 -43410731 + L1MC4 LINE L1 6984 7055 -987 1627 271 40 13 chr10 96906150 96906774 -43409991 + L1MC4 LINE L1 7266 7906 -136 248 185 0 15 chr10 96906830 96906895 -43409870 + (TA)n Simple_repeat Simple_repeat 1 64 0 7465 91 2 0 chr10 96907012 96908046 -43408719 + L1PA4 LINE L1 13 1048 -5098 7175 54 2 0 chr10 96908223 96909188 -43407577 + L1PA4 LINE L1 2120 3086 -3060 * 27452 55 4 2 chr10 96909182 96912815 -43403950 - L1P LINE L1 -2507 3639 2 11682 40 1 4 chr10 96912822 96914972 -43401793 + L1PA4 LINE L1 3894 6038 -117 1075 269 91 33 chr10 96914969 96915385 -43401380 + L1ME3A LINE L1 5436 5913 -251 * 2239 112 3 3 chr10 96915385 96915688 -43401077 + AluSp SINE Alu 1 303 -10 1075 269 91 33 chr10 96915688 96915955 -43400810 + L1ME3A LINE L1 5913 6163 -1 298 257 112 67 chr10 96916085 96916264 -43400501 + MIR3 SINE MIR 22 208 0 372 292 69 23 chr10 96916666 96916796 -43399969 + MIR SINE MIR 60 195 -67 1732 211 103 17 chr10 96916924 96917449 -43399316 + L1MA9 LINE L1 5705 6274 -38 399 322 12 6 chr10 96918054 96918224 -43398541 + MIR SINE MIR 20 190 -66 2728 138 22 50 chr10 96918416 96918916 -43397849 - MER61D LTR ERV1 -15 486 1 361 258 16 89 chr10 96919043 96919106 -43397659 + MER5B DNA MER1_type 1 55 -123 2066 107 7 0 chr10 96919106 96919417 -43397348 + AluSq SINE Alu 1 313 0 361 258 16 89 chr10 96919417 96919474 -43397291 + MER5B DNA MER1_type 55 115 -63 989 154 0 11 chr10 96919891 96920079 -43396686 - L1MA6 LINE L1 0 6300 6115 5179 221 32 50 chr10 96920079 96920246 -43396519 - L1MA6 LINE L1 -762 5384 5215 1731 207 0 0 chr10 96920246 96920546 -43396219 - AluJo SINE Alu -12 300 1 5179 221 32 50 chr10 96920546 96921863 -43394902 - L1MA6 LINE L1 -931 5215 3998 12249 105 3 0 chr10 96922266 96924037 -43392728 + L1PA5 LINE L1 11 1786 -4360 14420 42 0 0 chr10 96924037 96926570 -43390195 + L1PA4 LINE L1 3620 6152 -3 3665 70 2 0 chr10 96926572 96927074 -43389691 + L1PA5 LINE L1 4751 5253 -893 5233 73 1 0 chr10 96927216 96927923 -43388842 + L1PA5 LINE L1 5452 6159 0 334 122 0 0 chr10 96927924 96927973 -43388792 + L1MCa LINE L1 1879 1927 -4499 1176 127 4 40 chr10 96927996 96928224 -43388541 - L1PA13 LINE L1 -5026 1761 1542 3318 121 2 0 chr10 96928227 96928724 -43388041 + L1P LINE L1 233 730 -5416 745 183 0 7 chr10 96928721 96928858 -43387907 - L1PA13 LINE L1 -5242 1545 1410 * 1345 182 77 18 chr10 96928859 96929279 -43387486 - MER31-int LTR ERV1 -1169 3767 3368 1853 227 25 0 chr10 96929356 96929788 -43386977 + MER65-int LTR ERV1 4356 4798 -73 2824 213 42 5 chr10 96929790 96930461 -43386304 + L1MC1 LINE L1 5638 6333 0 21 36 0 0 chr10 96930961 96930989 -43385776 + AT_rich Low_complexity Low_complexity 1 28 0 230 274 142 9 chr10 96931084 96931197 -43385568 + MIR SINE MIR 20 147 -61 9773 194 79 12 chr10 96931247 96934481 -43382284 - L1MA3 LINE L1 -17 6288 2816 2115 147 0 3 chr10 96934481 96934781 -43381984 - AluSp SINE Alu -14 299 1 9773 194 79 12 chr10 96934781 96934838 -43381927 - L1MA3 LINE L1 -3489 2816 2764 4057 176 54 2 chr10 96934973 96935825 -43380940 + L1PA15-16 LINE L1 1278 2173 -4676 248 235 55 0 chr10 96936193 96936261 -43380504 + MER58B DNA MER1_type 30 88 -253 683 200 7 7 chr10 96936328 96936463 -43380302 + MER58B DNA MER1_type 206 340 -1 23 33 0 0 chr10 96937055 96937085 -43379680 + AT_rich Low_complexity Low_complexity 1 30 0 364 294 70 14 chr10 96937498 96937641 -43379124 + L1M4 LINE L1 3614 3764 -2382 932 285 62 41 chr10 96937697 96938452 -43378313 + L1M4 LINE L1 3982 4752 -1394 3331 224 21 7 chr10 96939020 96940102 -43376663 + L1M1 LINE L1 3440 4527 -3038 3783 91 0 2 chr10 96940103 96940629 -43376136 + LTR17 LTR ERV1 256 780 0 25147 119 58 57 chr10 96940629 96946426 -43370339 + HERV17 LTR ERV1 1 6005 -2621 255 59 0 0 chr10 96946426 96946460 -43370305 + HERV17 LTR ERV1 7515 7548 -1078 * 2282 62 0 0 chr10 96946450 96946742 -43370023 + HERV17 LTR ERV1 8335 8626 0 2133 68 19 7 chr10 96946744 96947053 -43369712 + LTR17 LTR ERV1 3 315 -465 2114 193 28 7 chr10 96947053 96947597 -43369168 + L1M1 LINE L1 4483 5037 -2528 1014 216 27 24 chr10 96947703 96948032 -43368733 - L1M4c LINE L1 -1105 5277 4948 1324 181 33 21 chr10 96948034 96948538 -43368227 + LTR9 LTR ERV1 1 612 0 647 231 6 0 chr10 96948544 96948717 -43368048 - L1M4 LINE L1 -1483 4899 4726 243 0 0 0 chr10 96948859 96948886 -43367879 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 17546 44 8 0 chr10 96948886 96951848 -43364917 - L1PA4 LINE L1 -11 6144 3162 6590 82 5 0 chr10 96951894 96952851 -43363914 - L1PA4 LINE L1 -3302 2844 1883 23121 48 45 3 chr10 96952951 96956067 -43360698 - L1P LINE L1 -2898 3248 2 22 35 0 0 chr10 96956074 96956103 -43360662 + AT_rich Low_complexity Low_complexity 1 29 0 6068 143 26 22 chr10 96956147 96957576 -43359189 - L1MA1 LINE L1 0 6302 4867 900 104 7 0 chr10 96957576 96957711 -43359054 - THE1B LTR MaLR 0 364 229 8948 120 64 8 chr10 96957881 96960045 -43356720 + L1PBa LINE L1 634 3046 -3816 3803 263 41 31 chr10 96960215 96961739 -43355026 - L1M4c LINE L1 -1416 4966 3429 1683 256 64 17 chr10 96961745 96962771 -43353994 - L1M4c LINE L1 -3947 2435 1447 351 277 45 0 chr10 96962796 96962908 -43353857 - L1ME3A LINE L1 -8 6162 6046 4586 185 51 15 chr10 96963059 96963089 -43353676 - L1M1 LINE L1 -494 5809 5782 1732 117 27 0 chr10 96963089 96963346 -43353419 - L1PA11 LINE L1 -2 6172 5909 4586 185 51 15 chr10 96963346 96964313 -43352452 - L1M1 LINE L1 -521 5782 4851 1571 17 0 0 chr10 96964313 96964489 -43352276 - AluYa5 SINE Alu -5 306 131 4586 185 51 15 chr10 96964489 96965320 -43351445 - L1M1 LINE L1 -1452 4851 3793 2028 146 3 0 chr10 96965320 96965615 -43351150 - AluSx SINE Alu -16 296 1 4586 185 51 15 chr10 96965615 96965723 -43351042 - L1M1 LINE L1 -2510 3793 3690 8396 96 6 2 chr10 96965823 96967877 -43348888 + L1PA8 LINE L1 4111 6173 0 5175 219 18 38 chr10 96968248 96969731 -43347034 + L1 LINE L1 3274 4726 -1420 21 0 0 0 chr10 96970124 96970145 -43346620 + AT_rich Low_complexity Low_complexity 1 21 0 215 350 30 0 chr10 96971593 96971693 -43345072 + MER5B DNA MER1_type 2 104 -74 1235 179 85 0 chr10 96972188 96972423 -43344342 + Tigger1 DNA MER2_type 2164 2418 0 185 357 0 14 chr10 96972971 96973041 -43343724 + MIR SINE MIR 34 102 -106 2333 192 30 6 chr10 96973126 96973651 -43343114 - L1M4c LINE L1 -4896 1488 951 3544 138 16 34 chr10 96973651 96974262 -43342503 - MER4A LTR ERV1 0 600 1 7372 141 68 36 chr10 96974274 96974464 -43342301 - MER4A-int LTR ERV1 -5 6593 6411 182 61 0 30 chr10 96974464 96974497 -43342268 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7372 141 68 36 chr10 96974497 96975817 -43340948 - MER4A-int LTR ERV1 -187 6411 5034 1406 202 53 7 chr10 96975957 96976259 -43340506 - L1M4c LINE L1 -5885 499 184 23 33 0 0 chr10 96976261 96976291 -43340474 + AT_rich Low_complexity Low_complexity 1 30 0 1312 120 5 10 chr10 96976291 96976483 -43340282 - AluSc SINE Alu -17 292 102 2729 164 28 54 chr10 96976483 96976978 -43339787 - Tigger3b DNA MER2_type -2465 563 84 1963 147 0 7 chr10 96976978 96977270 -43339495 - AluSx SINE Alu -22 290 1 2729 164 28 54 chr10 96977270 96977352 -43339413 - Tigger3b DNA MER2_type -2944 84 1 2663 229 32 22 chr10 96977361 96977664 -43339101 + L1MC1 LINE L1 1688 1987 -4439 1968 125 4 0 chr10 96977664 96977966 -43338799 + AluSp SINE Alu 12 314 0 2663 229 32 22 chr10 96977966 96979185 -43337580 + L1MC1 LINE L1 1987 3285 -3141 4665 231 47 26 chr10 96979288 96979722 -43337043 + L1MC1 LINE L1 4099 4523 -2090 191 36 36 0 chr10 96979722 96979750 -43337015 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4665 231 47 26 chr10 96979750 96980499 -43336266 + L1MC1 LINE L1 4523 5255 -1358 1917 128 3 16 chr10 96980499 96980805 -43335960 + AluSg SINE Alu 1 302 -8 798 89 0 0 chr10 96980805 96980917 -43335848 + (TA)n Simple_repeat Simple_repeat 2 113 0 4665 231 47 26 chr10 96980917 96982176 -43334589 + L1MC1 LINE L1 5254 6594 -19 243 262 64 128 chr10 96982306 96982355 -43334410 + MIR3 SINE MIR 27 78 -130 2181 110 3 3 chr10 96982355 96982656 -43334109 + AluY SINE Alu 5 305 -6 243 262 64 128 chr10 96982656 96982793 -43333972 + MIR3 SINE MIR 78 201 -7 314 287 21 0 chr10 96983246 96983340 -43333425 + MIR SINE MIR 50 145 -63 328 348 32 26 chr10 96984077 96984232 -43332533 + MIR SINE MIR 35 190 -72 219 300 30 70 chr10 96984534 96984634 -43332131 + MER5B DNA MER1_type 1 96 -82 7734 31 2 2 chr10 96985332 96986229 -43330536 - MER11D LTR ERVK 0 897 1 235 266 116 40 chr10 96987367 96987436 -43329329 + MIR SINE MIR 53 115 -147 2178 125 0 19 chr10 96987436 96987748 -43329017 - AluSg SINE Alu -4 306 1 235 266 116 40 chr10 96987748 96987851 -43328914 + MIR SINE MIR 115 238 -24 21 36 0 0 chr10 96989108 96989136 -43327629 + AT_rich Low_complexity Low_complexity 1 28 0 6400 127 30 19 chr10 96989594 96990653 -43326112 - MER11C LTR ERVK 0 1071 1 6566 96 17 0 chr10 96990694 96992707 -43324058 + L1PA8 LINE L1 3985 6168 -4 2065 132 10 0 chr10 96993004 96993307 -43323458 + AluSp SINE Alu 1 306 -7 197 274 16 32 chr10 96994724 96994786 -43321979 + MIR SINE MIR 66 126 -82 23 0 0 0 chr10 96995168 96995191 -43321574 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 96995232 96995265 -43321500 + AT_rich Low_complexity Low_complexity 1 33 0 6486 83 6 0 chr10 96995595 96996489 -43320276 + L1P LINE L1 3220 4118 -2028 1932 158 7 0 chr10 96996922 96997232 -43319533 + AluSx SINE Alu 1 312 0 2047 178 5 5 chr10 96997906 96998282 -43318483 - L1PA16 LINE L1 -6 6160 5785 831 93 0 0 chr10 96998284 96998392 -43318373 - THE1B LTR MaLR -5 359 252 989 154 0 0 chr10 96998407 96998556 -43318209 - THE1B LTR MaLR -215 149 1 3125 124 15 19 chr10 96998556 96999097 -43317668 - L1PA16 LINE L1 -374 5792 5254 240 371 73 19 chr10 96999355 96999614 -43317151 + HAL1 LINE L1 378 650 -1857 375 289 28 14 chr10 96999665 96999807 -43316958 + HAL1 LINE L1 1351 1494 -1013 337 307 24 0 chr10 96999857 96999984 -43316781 + HAL1 LINE L1 1637 1766 -741 453 307 72 46 chr10 96999998 97000585 -43316180 + HAL1 LINE L1 1815 2416 -91 9312 28 0 0 chr10 97000780 97002655 -43314110 - L1PA2 LINE L1 -5 6150 4276 7711 19 0 2 chr10 97002768 97003836 -43312929 + L1PA2 LINE L1 5088 6153 -2 22 0 0 0 chr10 97003866 97003888 -43312877 + AT_rich Low_complexity Low_complexity 1 22 0 282 132 0 0 chr10 97004129 97004182 -43312583 + (A)n Simple_repeat Simple_repeat 1 53 0 3965 223 16 10 chr10 97005335 97006165 -43310600 + L1M2a LINE L1 1290 2124 -5044 20399 137 21 69 chr10 97006177 97010236 -43306529 + L1P LINE L1 12 3820 -2326 1966 135 4 4 chr10 97010236 97010517 -43306248 + AluSg SINE Alu 1 281 -29 187 43 0 0 chr10 97010517 97010540 -43306225 + (TAAA)n Simple_repeat Simple_repeat 2 100 0 20399 137 21 69 chr10 97010540 97010945 -43305820 + L1P LINE L1 3820 4243 -1903 6292 146 5 0 chr10 97010943 97012124 -43304641 + L1MA2 LINE L1 5117 6304 0 * 1899 224 55 4 chr10 97012132 97012664 -43304101 + L1MB3 LINE L1 4735 5293 -853 639 137 24 16 chr10 97012808 97012932 -43303833 + L1MA5 LINE L1 6175 6299 -1 73 82 0 0 chr10 97012932 97013103 -43303662 + AT_rich Low_complexity Low_complexity 1 171 0 2323 183 27 24 chr10 97013110 97013657 -43303108 + L1MB3 LINE L1 5476 6024 -159 807 151 0 0 chr10 97013963 97014082 -43302683 - AluSq/x SINE Alu -190 122 4 643 193 43 0 chr10 97014086 97014247 -43302518 + L1MB3 LINE L1 6007 6174 -9 1204 240 44 23 chr10 97014264 97014739 -43302026 + L1M4 LINE L1 3776 4260 -1886 1736 160 50 3 chr10 97014812 97015130 -43301635 + L1PA15-16 LINE L1 6 338 -6511 3567 97 141 0 chr10 97015257 97015865 -43300900 + L1PA7 LINE L1 4014 4707 -1439 5773 74 1 1 chr10 97015865 97016615 -43300150 + L1PA7 LINE L1 5388 6140 -14 1203 201 44 44 chr10 97017010 97017399 -43299366 - L1M4 LINE L1 -1220 4926 4538 * 2221 211 49 17 chr10 97017386 97017978 -43298787 - L1MB5 LINE L1 0 6174 5564 2808 211 56 16 chr10 97018149 97018847 -43297918 + L1PA15-16 LINE L1 1167 1892 -4957 * 4484 120 7 4 chr10 97018827 97019544 -43297221 + L1PA15-16 LINE L1 2398 3116 -3733 1734 88 7 78 chr10 97019544 97019850 -43296915 + LTR12 LTR ERV1 1 284 -430 226 289 11 0 chr10 97019852 97019942 -43296823 + LTR30 LTR ERV1 553 643 -79 528 175 0 0 chr10 97019945 97020042 -43296723 + LTR12 LTR ERV1 483 579 -135 3939 130 6 0 chr10 97020042 97020705 -43296060 + L1P LINE L1 2417 3083 -3063 15101 140 17 23 chr10 97020715 97023433 -43293332 + L1PA5 LINE L1 12 2712 -3434 17723 71 8 0 chr10 97023579 97026777 -43289988 + L1PA5 LINE L1 2931 6145 -9 3488 66 2 10 chr10 97026799 97027299 -43289466 + L1P LINE L1 4068 4563 -1583 * 23613 98 10 3 chr10 97027298 97030816 -43285949 + L1P LINE L1 3 3542 -2604 300 200 138 62 chr10 97131407 97131552 -43185213 - L1ME4a LINE L1 -47 6074 5919 31 76 0 0 chr10 97131634 97131700 -43185065 + AT_rich Low_complexity Low_complexity 1 66 0 24 53 0 0 chr10 97131969 97132007 -43184758 + AT_rich Low_complexity Low_complexity 1 38 0 719 249 131 22 chr10 97132057 97132286 -43184479 - MIR SINE MIR -1 261 8 347 308 24 38 chr10 97133104 97133285 -43183480 + MIR SINE MIR 37 212 -50 29 60 0 0 chr10 97133570 97133620 -43183145 + AT_rich Low_complexity Low_complexity 1 50 0 471 247 102 24 chr10 97134203 97134530 -43182235 - MER50 LTR ERV1 -298 436 14 1470 187 57 3 chr10 97134973 97135256 -43181509 + AluJo SINE Alu 1 298 -14 1967 151 14 14 chr10 97135858 97136202 -43180563 + MER2 DNA MER2_type 1 344 0 23 54 0 0 chr10 97136656 97136693 -43180072 + AT_rich Low_complexity Low_complexity 1 37 0 939 236 132 82 chr10 97136742 97137182 -43179583 - MLT1H1 LTR MaLR -90 477 16 2214 129 21 19 chr10 97137450 97137823 -43178942 + THE1C LTR MaLR 2 375 0 2346 102 0 0 chr10 97138034 97138337 -43178428 + AluSq SINE Alu 1 303 -10 2177 128 0 6 chr10 97139659 97139971 -43176794 - AluSx SINE Alu -2 310 1 2213 99 3 3 chr10 97141155 97141449 -43175316 - AluSg SINE Alu -16 294 1 32 43 0 0 chr10 97141572 97141618 -43175147 + AT_rich Low_complexity Low_complexity 1 46 0 387 298 176 10 chr10 97142344 97142549 -43174216 + MIR SINE MIR 5 243 -19 206 190 310 0 chr10 97142676 97142734 -43174031 + MIR SINE MIR 187 262 0 2305 77 0 22 chr10 97143163 97143476 -43173289 - AluSq SINE Alu -7 306 1 367 347 68 0 chr10 97144656 97144803 -43171962 + MIR SINE MIR 50 206 -56 343 202 67 0 chr10 97144986 97145075 -43171690 - MIR SINE MIR -16 246 152 954 170 35 10 chr10 97145075 97145275 -43171490 - L1MC1 LINE L1 0 6333 6129 990 201 56 0 chr10 97145275 97145509 -43171256 - L1M4 LINE L1 -1196 4950 4704 1021 197 0 0 chr10 97145509 97145702 -43171063 - AluJo SINE Alu 0 312 120 1257 231 26 6 chr10 97145702 97146053 -43170712 - L1M4 LINE L1 -1454 4692 4335 351 282 0 0 chr10 97146054 97146139 -43170626 - MIR SINE MIR -107 155 71 1826 224 240 49 chr10 97146173 97147146 -43169619 - L2 LINE L2 0 3313 2133 37 0 0 0 chr10 97147176 97147213 -43169552 + AT_rich Low_complexity Low_complexity 1 37 0 2183 117 3 0 chr10 97147254 97147552 -43169213 - AluSx SINE Alu -13 299 1 1974 213 38 79 chr10 97147887 97148446 -43168319 - MER77 LTR ERV1 -10 595 60 676 268 83 31 chr10 97148546 97148774 -43167991 + MIR SINE MIR 2 241 -21 21 0 0 0 chr10 97149805 97149826 -43166939 + AT_rich Low_complexity Low_complexity 1 21 0 905 174 37 21 chr10 97151457 97151647 -43165118 - AluJo SINE Alu 0 312 120 279 0 0 0 chr10 97151929 97151960 -43164805 + (TA)n Simple_repeat Simple_repeat 1 31 0 2008 149 3 0 chr10 97151961 97152269 -43164496 - AluSx SINE Alu 0 312 4 1500 138 123 8 chr10 97152378 97152631 -43164134 - AluSg1 SINE Alu -27 282 1 4278 89 10 3 chr10 97153217 97153813 -43162952 + MER4A LTR ERV1 1 600 0 1733 157 7 43 chr10 97153916 97154221 -43162544 + AluJo SINE Alu 5 298 -14 201 195 24 0 chr10 97155131 97155172 -43161593 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 695 190 0 0 chr10 97155922 97156038 -43160727 + FLAM_C SINE Alu 1 116 -17 335 291 12 81 chr10 97156364 97156611 -43160154 - HAL1 LINE L1 0 2507 2278 2039 231 129 33 chr10 97156694 97157486 -43159279 - L1MC4 LINE L1 -398 7644 6777 1630 149 16 57 chr10 97157491 97157807 -43158958 + AluJb SINE Alu 1 303 -9 294 29 0 0 chr10 97157843 97157878 -43158887 + (CA)n Simple_repeat Simple_repeat 2 36 0 913 233 105 54 chr10 97157892 97158338 -43158427 - HAL1 LINE L1 -1033 1474 1006 249 247 52 0 chr10 97158321 97158398 -43158367 + L1ME3A LINE L1 6080 6160 -10 * 239 308 66 0 chr10 97158390 97158481 -43158284 - L1ME3A LINE L1 -79 6091 5995 * 1554 207 129 101 chr10 97158472 97159125 -43157640 - L1ME2 LINE L1 -91 6073 5403 199 316 0 38 chr10 97159157 97159236 -43157529 + L3b LINE CR1 1296 1371 -212 232 219 0 0 chr10 97159491 97159555 -43157210 - L1ME2 LINE L1 -787 5375 5312 * 5576 180 53 23 chr10 97159552 97161380 -43155385 - L1MC2 LINE L1 -11 7128 5262 723 236 79 29 chr10 97161382 97161623 -43155142 - L1MC2 LINE L1 -1871 5070 4818 * 2020 265 28 0 chr10 97161621 97162194 -43154571 - L1MC2 LINE L1 -3363 3578 2990 286 206 14 14 chr10 97162218 97162291 -43154474 - L1MC2 LINE L1 -5079 1344 1272 22 35 0 0 chr10 97162594 97162623 -43154142 + AT_rich Low_complexity Low_complexity 1 29 0 298 282 11 98 chr10 97162990 97163164 -43153601 - LTR16C LTR ERVL 0 491 333 1984 149 17 0 chr10 97163971 97164266 -43152499 - AluSx SINE Alu -10 302 3 204 363 53 18 chr10 97164497 97164610 -43152155 + MIR SINE MIR 59 175 -87 32 43 0 0 chr10 97164881 97164927 -43151838 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr10 97165550 97165581 -43151184 + AT_rich Low_complexity Low_complexity 1 31 0 1896 214 58 2 chr10 97166012 97166442 -43150323 + L1ME2 LINE L1 5605 6058 -106 32 43 0 0 chr10 97166734 97166780 -43149985 + AT_rich Low_complexity Low_complexity 1 46 0 279 0 0 0 chr10 97167592 97167623 -43149142 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 402 57 0 0 chr10 97167622 97167675 -43149090 + (TG)n Simple_repeat Simple_repeat 2 54 0 206 364 40 0 chr10 97167875 97167974 -43148791 + L2 LINE L2 2310 2412 -902 6853 49 30 5 chr10 97167975 97168840 -43147925 - MER11D LTR ERVK 0 897 11 447 17 0 34 chr10 97168940 97168999 -43147766 - MER11D LTR ERVK -840 57 1 1795 111 19 0 chr10 97169872 97170134 -43146631 + MER1B DNA MER1_type 1 267 -72 325 158 18 0 chr10 97170183 97170240 -43146525 + MER103 DNA DNA 7 64 -102 1564 128 7 95 chr10 97171101 97171406 -43145359 + AluJb SINE Alu 1 278 -34 198 0 0 0 chr10 97171407 97171429 -43145336 + (T)n Simple_repeat Simple_repeat 1 22 0 341 239 84 71 chr10 97171430 97171585 -43145180 + L1M4 LINE L1 3252 3408 -2738 1002 230 137 65 chr10 97171863 97172070 -43144695 + MER65B LTR ERV1 1 192 -339 2034 146 3 0 chr10 97172070 97172372 -43144393 + AluSx SINE Alu 1 303 -9 1002 230 137 65 chr10 97172372 97172659 -43144106 + MER65B LTR ERV1 192 531 0 2219 86 3 13 chr10 97172799 97173102 -43143663 - AluSg SINE Alu -6 304 5 229 292 0 15 chr10 97173288 97173353 -43143412 + L2 LINE L2 2440 2503 -811 1387 178 34 66 chr10 97173360 97173680 -43143085 - AluJo SINE Alu -1 311 2 1497 174 31 14 chr10 97173711 97174004 -43142761 + AluJb SINE Alu 1 298 -14 1744 180 0 32 chr10 97174254 97174565 -43142200 - AluJo SINE Alu -11 301 1 232 119 45 75 chr10 97174664 97174731 -43142034 + L1MCa LINE L1 2006 2070 -4356 22 0 0 0 chr10 97174850 97174872 -43141893 + AT_rich Low_complexity Low_complexity 1 22 0 426 231 128 19 chr10 97175256 97175412 -43141353 + MER104 DNA Tc2 5 177 -3 554 192 58 64 chr10 97176045 97176217 -43140548 - L1MEc LINE L1 -4359 2037 1867 766 155 14 0 chr10 97176224 97176366 -43140399 - L1MB7 LINE L1 0 6184 6041 2298 225 57 19 chr10 97176392 97177082 -43139683 - L1M4c LINE L1 -3456 2926 2199 2158 108 0 10 chr10 97177082 97177389 -43139376 - AluSq SINE Alu -9 304 1 2298 225 57 19 chr10 97177389 97177461 -43139304 - L1M4c LINE L1 -4183 2199 2131 1333 150 0 5 chr10 97177479 97177686 -43139079 - AluJb SINE Alu -2 310 105 2269 100 0 0 chr10 97177788 97178087 -43138678 - AluSx SINE Alu -13 299 1 404 281 109 47 chr10 97178132 97178324 -43138441 + MIR SINE MIR 58 261 -1 266 231 148 19 chr10 97178720 97178828 -43137937 + Charlie2a DNA MER1_type 36 157 -2705 345 316 120 13 chr10 97178961 97179186 -43137579 + LTR16A1 LTR ERVL 209 457 0 2036 205 127 8 chr10 97179193 97179675 -43137090 - MLT1F LTR MaLR -2 540 2 2372 239 117 51 chr10 97179679 97180525 -43136240 + Charlie2a DNA MER1_type 207 1148 -1714 2069 136 45 6 chr10 97180525 97180855 -43135910 - L1PB3 LINE L1 0 6154 5812 2372 239 117 51 chr10 97180855 97181133 -43135632 + Charlie2a DNA MER1_type 1148 1406 -1456 2196 122 0 0 chr10 97181141 97181435 -43135330 - AluSx SINE Alu -17 295 2 1199 183 33 44 chr10 97181489 97181762 -43135003 - AluJo SINE Alu 0 312 43 469 210 11 91 chr10 97181770 97181956 -43134809 + Charlie2a DNA MER1_type 1482 1652 -1210 605 230 227 24 chr10 97181964 97182295 -43134470 + Charlie2a DNA MER1_type 2218 2615 -247 210 118 0 0 chr10 97182359 97182393 -43134372 + (A)n Simple_repeat Simple_repeat 1 34 0 1662 196 4 0 chr10 97182393 97182674 -43134091 - AluJo SINE Alu -30 282 1 376 228 57 19 chr10 97182700 97182858 -43133907 + Charlie2a DNA MER1_type 2664 2827 -35 397 287 0 0 chr10 97183184 97183271 -43133494 - L2 LINE L2 -2 3270 3184 835 241 55 5 chr10 97183313 97183512 -43133253 - MER3 DNA MER1_type 0 209 1 371 374 37 11 chr10 97183553 97183743 -43133022 - L2 LINE L2 -164 3108 2914 637 202 23 23 chr10 97184349 97184478 -43132287 - L2 LINE L2 -5 3308 3180 414 199 82 17 chr10 97184628 97184788 -43131977 + L1ME1 LINE L1 6041 6333 -1 401 323 75 75 chr10 97184888 97185290 -43131475 + L1MEc LINE L1 246 647 -5472 598 266 103 56 chr10 97185315 97185900 -43130865 + L1MEc LINE L1 720 1363 -4867 * 726 213 20 82 chr10 97185876 97186062 -43130703 + L1ME1 LINE L1 2567 2737 -3392 2265 81 0 3 chr10 97186062 97186369 -43130396 + AluSx SINE Alu 1 306 0 726 213 20 82 chr10 97186369 97186425 -43130340 + L1ME1 LINE L1 2737 2795 -3334 1194 198 59 59 chr10 97186426 97186685 -43130080 + L1ME1 LINE L1 4915 5176 -953 2405 74 0 0 chr10 97186685 97186981 -43129784 + AluSc SINE Alu 13 308 -1 1194 198 59 59 chr10 97186981 97187126 -43129639 + L1ME1 LINE L1 5175 5319 -810 674 110 0 18 chr10 97187233 97187342 -43129423 - L1MA5 LINE L1 -5 6295 6189 1743 198 37 54 chr10 97187498 97187983 -43128782 + L1ME1 LINE L1 5668 6144 -5 413 279 113 17 chr10 97188059 97188299 -43128466 + L1MEc LINE L1 1470 1732 -4578 676 277 62 6 chr10 97188652 97189002 -43127763 + L1MEc LINE L1 2417 2785 -3344 273 265 36 128 chr10 97189224 97189443 -43127322 - L2 LINE L2 -561 2753 2555 560 229 79 0 chr10 97189447 97189587 -43127178 + L2 LINE L2 3158 3308 -5 24 77 0 0 chr10 97190547 97190599 -43126166 + AT_rich Low_complexity Low_complexity 1 52 0 186 315 154 21 chr10 97191748 97191891 -43124874 + MIR SINE MIR 28 189 -73 750 95 16 32 chr10 97192020 97192146 -43124619 + AluSg/x SINE Alu 189 312 0 1988 134 160 11 chr10 97192161 97192542 -43124223 - SATR1 Satellite Satellite -20 450 13 289 105 0 105 chr10 97193269 97193326 -43123439 - MADE1 DNA Mariner 0 80 30 348 119 51 0 chr10 97193364 97193423 -43123342 + MER5C DNA MER1_type 1 62 -262 357 359 65 75 chr10 97194158 97194529 -43122236 - L2 LINE L2 0 3272 2906 186 43 0 0 chr10 97194926 97194949 -43121816 + (TG)n Simple_repeat Simple_repeat 1 23 0 3662 121 34 10 chr10 97196437 97197051 -43119714 - L1MB3 LINE L1 -3 6180 5552 216 250 0 0 chr10 97197376 97197440 -43119325 + CT-rich Low_complexity Low_complexity 1 64 0 1853 149 0 17 chr10 97197631 97197920 -43118845 + AluJo SINE Alu 5 288 -24 24 32 0 0 chr10 97198088 97198119 -43118646 + AT_rich Low_complexity Low_complexity 1 31 0 223 122 0 49 chr10 97198156 97198197 -43118568 + (ATATG)n Simple_repeat Simple_repeat 2 40 0 2165 92 10 0 chr10 97198543 97198836 -43117929 - AluY SINE Alu -15 296 1 5373 119 36 64 chr10 97199105 97199743 -43117022 - L1MA7 LINE L1 -1 6290 5636 2030 142 0 10 chr10 97199743 97200053 -43116712 - AluSx SINE Alu -5 307 1 5373 119 36 64 chr10 97200053 97200291 -43116474 - L1MA7 LINE L1 -655 5636 5393 2280 94 3 0 chr10 97200291 97200589 -43116176 - AluSp SINE Alu -14 299 1 5373 119 36 64 chr10 97200589 97200982 -43115783 - L1MA7 LINE L1 -898 5393 5060 212 222 74 0 chr10 97200999 97201053 -43115712 + L2 LINE L2 3207 3264 -8 419 148 194 46 chr10 97201231 97201339 -43115426 - FLAM_C SINE Alu -9 134 11 957 113 0 108 chr10 97201449 97201526 -43115239 + AluJb SINE Alu 136 183 -129 2288 64 0 20 chr10 97201526 97201824 -43114941 + AluY SINE Alu 1 292 -19 957 113 0 108 chr10 97201824 97201931 -43114834 + AluJb SINE Alu 183 300 -12 248 317 171 67 chr10 97201949 97202597 -43114168 + L2 LINE L2 2550 3297 -16 342 215 76 0 chr10 97202646 97202725 -43114040 - MLT1I LTR MaLR -7 402 318 420 256 105 8 chr10 97202804 97202937 -43113828 - MLT1I LTR MaLR -184 225 80 2186 97 13 3 chr10 97203145 97203443 -43113322 + AluSc SINE Alu 1 301 -8 588 29 0 0 chr10 97204069 97204139 -43112626 + (CTA)n Simple_repeat Simple_repeat 2 71 0 422 290 82 33 chr10 97205052 97205112 -43111653 + MIR3 SINE MIR 8 64 -144 2221 96 3 13 chr10 97205112 97205413 -43111352 - AluSq SINE Alu -15 298 1 422 290 82 33 chr10 97205413 97205535 -43111230 + MIR3 SINE MIR 64 199 -9 227 339 140 58 chr10 97205964 97206135 -43110630 - L2 LINE L2 -14 3258 3074 1719 320 100 14 chr10 97206136 97207077 -43109688 - L2 LINE L2 -418 2896 1875 3260 102 32 96 chr10 97207975 97208572 -43108193 - L1PA16 LINE L1 -1 6165 5607 1818 178 0 6 chr10 97208582 97208896 -43107869 - AluJo SINE Alu 0 312 1 845 164 87 87 chr10 97208965 97209184 -43107581 + MER20 DNA MER1_type 1 219 0 24 32 0 0 chr10 97209396 97209427 -43107338 + AT_rich Low_complexity Low_complexity 1 31 0 1815 186 3 0 chr10 97209516 97209822 -43106943 + AluJo SINE Alu 1 307 -5 1478 170 78 14 chr10 97210429 97210711 -43106054 + AluJo SINE Alu 3 302 -10 180 0 0 0 chr10 97210887 97210907 -43105858 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 97210907 97210928 -43105837 + AT_rich Low_complexity Low_complexity 1 21 0 455 265 0 16 chr10 97212306 97212431 -43104334 + MIR SINE MIR 66 187 -61 270 223 19 97 chr10 97213244 97213347 -43103418 + L3b LINE CR1 1347 1441 -142 5306 176 22 18 chr10 97214125 97214331 -43102434 + L1MC1 LINE L1 4552 4756 -1577 2336 97 0 0 chr10 97214331 97214629 -43102136 + AluSc SINE Alu 1 298 -11 5306 176 22 18 chr10 97214629 97216019 -43100746 + L1MC1 LINE L1 4756 6149 -184 519 113 25 0 chr10 97216026 97216106 -43100659 + L1MC1 LINE L1 6250 6331 -2 977 248 59 13 chr10 97216129 97216435 -43100330 - L1ME3A LINE L1 -84 6086 5767 25 0 0 0 chr10 97216537 97216562 -43100203 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 97216626 97216654 -43100111 + AT_rich Low_complexity Low_complexity 1 28 0 347 342 70 35 chr10 97217309 97217508 -43099257 + L3 LINE CR1 2 207 -1370 23 68 0 0 chr10 97217870 97217914 -43098851 + AT_rich Low_complexity Low_complexity 1 44 0 1730 154 18 28 chr10 97217916 97218201 -43098564 - AluJo SINE Alu -21 291 10 292 291 0 48 chr10 97218406 97218509 -43098256 + MER102b DNA MER1_type 232 329 -12 1325 191 4 25 chr10 97219068 97219309 -43097456 - AluJo SINE Alu -75 237 2 38 39 0 0 chr10 97219730 97219782 -43096983 + AT_rich Low_complexity Low_complexity 1 52 0 596 295 136 66 chr10 97220157 97220686 -43096079 - MLT1K LTR MaLR 0 588 23 243 245 20 71 chr10 97220750 97220848 -43095917 - MER5B DNA MER1_type -81 108 3 249 246 0 18 chr10 97220790 97220847 -43095918 + MER5A DNA MER1_type 132 187 -2 282 29 0 0 chr10 97221793 97221828 -43094937 + (TTA)n Simple_repeat Simple_repeat 3 37 0 7580 20 0 1 chr10 97221830 97222811 -43093954 - L1PA3 LINE L1 -26 6129 5149 23 54 0 0 chr10 97222988 97223025 -43093740 + AT_rich Low_complexity Low_complexity 1 37 0 1969 157 0 3 chr10 97223700 97224000 -43092765 - AluJo SINE Alu -10 302 4 263 302 178 35 chr10 97224213 97224382 -43092383 - MIR SINE MIR -18 244 52 1916 216 96 33 chr10 97224491 97225001 -43091764 + MLT1G LTR MaLR 7 548 -42 2355 110 0 0 chr10 97225199 97225509 -43091256 - AluSx SINE Alu 0 312 3 510 209 0 29 chr10 97225596 97225701 -43091064 - L2 LINE L2 -5 3308 3207 2018 156 24 3 chr10 97225701 97226029 -43090736 - MER2 DNA MER2_type -10 335 1 371 255 0 0 chr10 97226430 97226532 -43090233 - L1M4 LINE L1 -3448 3196 3095 * 5050 198 56 87 chr10 97226527 97226569 -43090196 - L1M4 LINE L1 -5145 1397 1355 2233 82 27 3 chr10 97226569 97226861 -43089904 - AluY SINE Alu -12 299 1 5050 198 56 87 chr10 97226861 97226893 -43089872 - L1M4 LINE L1 -5187 1355 1324 2038 112 0 18 chr10 97226893 97227179 -43089586 - AluSx SINE Alu -13 299 19 5050 198 56 87 chr10 97227179 97227725 -43089040 - L1M4 LINE L1 -5218 1324 763 3100 138 6 36 chr10 97227725 97228253 -43088512 - MER41E LTR ERV1 0 512 1 5050 198 56 87 chr10 97228253 97229070 -43087695 - L1M4 LINE L1 -5779 763 2 25 0 0 0 chr10 97229915 97229940 -43086825 + AT_rich Low_complexity Low_complexity 1 25 0 5961 78 24 73 chr10 97230062 97231431 -43085334 + SVA Other Other 8 868 -520 6269 60 31 51 chr10 97231448 97232412 -43084353 + SVA Other Other 433 1377 -9 25 31 0 0 chr10 97232412 97232444 -43084321 + AT_rich Low_complexity Low_complexity 1 32 0 800 108 78 0 chr10 97232827 97232956 -43083809 + MER85 DNA T2_type 1 139 0 25 51 0 0 chr10 97233256 97233295 -43083470 + AT_rich Low_complexity Low_complexity 1 39 0 249 33 0 0 chr10 97233419 97233449 -43083316 + (CA)n Simple_repeat Simple_repeat 2 31 0 2021 152 3 0 chr10 97233870 97234173 -43082592 + AluJb SINE Alu 1 304 -8 1001 125 7 0 chr10 97234926 97235070 -43081695 - AluSg/x SINE Alu -35 275 131 1450 153 123 0 chr10 97235391 97235659 -43081106 + AluJb SINE Alu 2 302 0 605 298 50 32 chr10 97235910 97236158 -43080607 + MIR SINE MIR 7 256 -6 1232 108 0 0 chr10 97236620 97236787 -43079978 + AluSg/x SINE Alu 134 300 -12 2370 90 0 0 chr10 97237578 97237879 -43078886 + AluSg SINE Alu 1 301 -9 417 224 35 149 chr10 97238091 97238292 -43078473 - MER63A DNA MER1_type -31 179 2 209 324 14 28 chr10 97238822 97238893 -43077872 + MIR SINE MIR 44 113 -95 335 303 80 40 chr10 97238950 97239125 -43077640 - HAL1 LINE L1 0 2507 2326 2009 139 0 19 chr10 97239233 97239549 -43077216 - AluSx SINE Alu -2 310 1 233 307 49 25 chr10 97239595 97239758 -43077007 - HAL1b LINE L1 -435 913 747 697 237 143 56 chr10 97240124 97240263 -43076502 - HAL1 LINE L1 -599 1908 1782 221 0 0 33 chr10 97240263 97240293 -43076472 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 697 237 143 56 chr10 97240293 97240511 -43076254 - HAL1 LINE L1 -725 1782 1520 1493 116 0 5 chr10 97240543 97240772 -43075993 + AluJb SINE Alu 86 313 0 22 0 0 0 chr10 97241765 97241787 -43074978 + AT_rich Low_complexity Low_complexity 1 22 0 271 268 12 24 chr10 97242158 97242240 -43074525 + 7SK RNA RNA 14 94 -99 28 71 0 0 chr10 97242453 97242509 -43074256 + AT_rich Low_complexity Low_complexity 1 56 0 223 305 67 76 chr10 97242866 97242971 -43073794 + MER5A DNA MER1_type 35 138 -51 587 245 40 7 chr10 97243640 97243791 -43072974 + MIR SINE MIR 106 261 -1 273 305 85 35 chr10 97244195 97244336 -43072429 + L2 LINE L2 2605 2752 -562 754 154 24 0 chr10 97244420 97244543 -43072222 + AluSq/x SINE Alu 1 126 -187 366 23 0 0 chr10 97244543 97244586 -43072179 + (CA)n Simple_repeat Simple_repeat 2 44 0 301 378 51 55 chr10 97244711 97244965 -43071800 + L2 LINE L2 3020 3272 0 1207 85 12 0 chr10 97246363 97246528 -43070237 - L1PA10 LINE L1 -3 6165 5999 2290 102 0 0 chr10 97246898 97247201 -43069564 + AluSg SINE Alu 1 303 -7 261 0 0 0 chr10 97247466 97247495 -43069270 + (TC)n Simple_repeat Simple_repeat 2 30 0 1865 106 8 0 chr10 97247797 97248053 -43068712 + AluSx SINE Alu 50 307 -5 28 48 0 0 chr10 97248419 97248461 -43068304 + AT_rich Low_complexity Low_complexity 1 42 0 30 0 0 0 chr10 97248502 97248532 -43068233 + AT_rich Low_complexity Low_complexity 1 30 0 248 175 0 16 chr10 97248619 97248682 -43068083 + (TTAA)n Simple_repeat Simple_repeat 1 62 0 198 0 0 0 chr10 97250505 97250527 -43066238 + (TAA)n Simple_repeat Simple_repeat 2 23 0 21 36 0 0 chr10 97250569 97250597 -43066168 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr10 97250806 97250836 -43065929 + AT_rich Low_complexity Low_complexity 1 30 0 195 129 0 0 chr10 97250942 97250973 -43065792 + (TG)n Simple_repeat Simple_repeat 2 32 0 1880 81 53 0 chr10 97252115 97252361 -43064404 + AluY SINE Alu 37 295 -16 202 200 0 0 chr10 97253162 97253207 -43063558 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 190 245 0 57 chr10 97254245 97254298 -43062467 - L2 LINE L2 -9 3304 3255 338 0 24 0 chr10 97254364 97254406 -43062359 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 0 0 0 chr10 97254595 97254617 -43062148 + AT_rich Low_complexity Low_complexity 1 22 0 2019 140 0 0 chr10 97254624 97254902 -43061863 - AluSx SINE Alu -24 288 11 808 154 0 22 chr10 97254967 97255103 -43061662 - FLAM_C SINE Alu 0 133 1 1455 123 99 78 chr10 97255269 97255449 -43061316 + MER44D DNA MER2_type 1 176 -2315 2156 112 3 3 chr10 97255449 97255745 -43061020 - AluSx SINE Alu -16 296 1 1455 123 99 78 chr10 97255745 97255896 -43060869 + MER44D DNA MER2_type 176 609 0 318 339 88 21 chr10 97257050 97257234 -43059531 - L3 LINE CR1 -71 1506 1310 258 289 19 0 chr10 97257234 97257286 -43059479 - MER91A DNA MER1_type -1 195 143 411 358 24 48 chr10 97257322 97257487 -43059278 - MER91A DNA MER1_type -26 170 10 530 317 171 45 chr10 97257497 97258099 -43058666 - L3 LINE CR1 -267 1310 633 947 176 59 0 chr10 97258154 97258324 -43058441 + MER5A DNA MER1_type 10 189 0 490 323 109 36 chr10 97258356 97258687 -43058078 - L3 LINE CR1 -1003 574 220 385 348 67 9 chr10 97259704 97259914 -43056851 - L2 LINE L2 -568 2746 2525 191 371 45 0 chr10 97260222 97260311 -43056454 - L3b LINE CR1 -289 1294 1202 298 294 47 53 chr10 97260513 97260683 -43056082 + MIR3 SINE MIR 24 192 -16 374 213 128 0 chr10 97260754 97260848 -43055917 - L2 LINE L2 -32 3281 3176 24 32 0 0 chr10 97261185 97261216 -43055549 + AT_rich Low_complexity Low_complexity 1 31 0 1854 178 0 3 chr10 97261619 97261923 -43054842 + AluJb SINE Alu 2 304 -8 25 0 0 0 chr10 97263025 97263050 -43053715 + AT_rich Low_complexity Low_complexity 1 25 0 2261 103 0 7 chr10 97263110 97263411 -43053354 + AluSx SINE Alu 1 299 -13 2146 112 7 7 chr10 97263634 97263938 -43052827 + AluSx SINE Alu 1 304 -8 261 241 0 0 chr10 97264439 97264493 -43052272 - L2 LINE L2 0 3272 3219 1546 157 57 21 chr10 97264679 97264959 -43051806 + AluJo SINE Alu 1 290 -22 627 313 137 55 chr10 97265127 97265856 -43050909 - L2 LINE L2 -1 3271 2470 252 307 91 23 chr10 97266095 97266163 -43050602 + MIR3 SINE MIR 76 153 -55 2160 107 17 7 chr10 97266163 97266461 -43050304 + AluSx SINE Alu 1 301 -11 252 307 91 23 chr10 97266461 97266480 -43050285 + MIR3 SINE MIR 153 169 -39 1899 155 0 17 chr10 97267007 97267303 -43049462 - AluJo SINE Alu -21 291 1 1300 153 88 62 chr10 97268520 97268794 -43047971 + AluJo SINE Alu 31 311 -1 2340 104 0 3 chr10 97269065 97269374 -43047391 + AluSx SINE Alu 1 308 -4 313 299 0 0 chr10 97270612 97270699 -43046066 + T-rich Low_complexity Low_complexity 1 87 0 2119 99 0 0 chr10 97271214 97271486 -43045279 + AluY SINE Alu 23 294 -17 2355 114 59 75 chr10 97271733 97271870 -43044895 + LTR49-int LTR ERV1 3964 4102 -2229 1880 139 3 24 chr10 97271870 97272181 -43044584 - AluSx SINE Alu 0 305 1 2355 114 59 75 chr10 97272181 97272552 -43044213 + LTR49-int LTR ERV1 4102 4466 -1865 2212 109 0 13 chr10 97272552 97272856 -43043909 - AluSx SINE Alu -12 300 1 2355 114 59 75 chr10 97272856 97272907 -43043858 + LTR49-int LTR ERV1 4466 4516 -1815 2181 40 47 4 chr10 97273028 97273305 -43043460 + AluY SINE Alu 20 308 -3 348 120 0 0 chr10 97274274 97274324 -43042441 + Alu SINE Alu 1 50 -250 434 318 118 29 chr10 97274980 97275320 -43041445 + L2 LINE L2 211 580 -2734 2415 58 7 0 chr10 97275492 97275784 -43040981 - AluY SINE Alu -17 294 1 350 361 190 29 chr10 97275814 97276617 -43040148 + L2 LINE L2 1734 2406 -866 1951 119 0 73 chr10 97276617 97276950 -43039815 - AluSx SINE Alu 0 312 2 1971 143 3 0 chr10 97276954 97277248 -43039517 - AluSx SINE Alu -17 295 1 350 361 190 29 chr10 97277248 97277733 -43039032 + L2 LINE L2 2408 3235 -37 526 163 0 0 chr10 97277898 97277984 -43038781 + MLT1A1 LTR MaLR 280 365 0 2103 77 36 4 chr10 97278160 97278472 -43038293 - AluSg1 SINE Alu 0 321 1 2171 127 3 0 chr10 97280101 97280409 -43036356 - AluSx SINE Alu -3 309 1 327 265 69 20 chr10 97281355 97281457 -43035308 - L2 LINE L2 -10 3303 3197 296 312 52 32 chr10 97281640 97281794 -43034971 - L2 LINE L2 -163 3109 2953 2373 89 3 3 chr10 97281832 97282135 -43034630 - AluSq SINE Alu -10 303 1 388 308 26 133 chr10 97282232 97282492 -43034273 - L2 LINE L2 -508 2806 2520 1968 135 4 0 chr10 97282492 97282801 -43033964 + AluSx SINE Alu 1 310 0 388 308 26 133 chr10 97282801 97282903 -43033862 - L2 LINE L2 -794 2520 2491 2286 101 3 3 chr10 97282903 97283209 -43033556 + AluSg SINE Alu 1 306 -4 388 308 26 133 chr10 97283209 97283266 -43033499 - L2 LINE L2 -823 2491 2430 1252 14 0 0 chr10 97283368 97283513 -43033252 + L1PA5 LINE L1 6009 6153 -1 292 77 0 0 chr10 97283654 97283693 -43033072 + Alu SINE Alu 1 39 -263 1515 81 30 5 chr10 97283693 97283712 -43033053 + AluSg/x SINE Alu 100 117 -195 1053 24 0 0 chr10 97283712 97283835 -43032930 + L1PA3 LINE L1 6030 6152 -3 1515 81 30 5 chr10 97283835 97284013 -43032752 + AluSg/x SINE Alu 117 302 -10 1295 139 40 36 chr10 97284217 97284298 -43032467 + L1MB8 LINE L1 5628 5707 -471 2388 77 0 13 chr10 97284298 97284598 -43032167 - AluY SINE Alu -15 296 1 1295 139 40 36 chr10 97284598 97284790 -43031975 + L1MB8 LINE L1 5707 5902 -276 269 26 26 0 chr10 97284799 97284837 -43031928 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1424 179 72 0 chr10 97284842 97285105 -43031660 - AluJb SINE Alu -30 282 1 671 126 172 7 chr10 97285134 97285285 -43031480 + L1MB8 LINE L1 6003 6178 0 1619 109 0 0 chr10 97285506 97285716 -43031049 + AluJb SINE Alu 1 210 -102 2476 75 0 7 chr10 97285716 97286022 -43030743 + AluSg SINE Alu 1 305 -5 739 138 0 0 chr10 97286022 97286138 -43030627 + AluSg/x SINE Alu 196 311 -1 24 0 0 0 chr10 97286233 97286257 -43030508 + AT_rich Low_complexity Low_complexity 1 24 0 1086 127 0 53 chr10 97287954 97288116 -43028649 + AluSc SINE Alu 127 296 -13 827 117 8 0 chr10 97288116 97288244 -43028521 + L1PB3 LINE L1 6023 6151 -3 2346 109 6 0 chr10 97288249 97288560 -43028205 + AluSq SINE Alu 1 313 0 1086 127 0 53 chr10 97288560 97288580 -43028185 + AluSc SINE Alu 300 305 -4 363 228 155 73 chr10 97288641 97288873 -43027892 + L1MC5 LINE L1 7499 7749 -212 241 295 63 0 chr10 97288917 97289012 -43027753 - L1ME4a LINE L1 -56 6065 5965 261 168 95 32 chr10 97289283 97289378 -43027387 + L1MC5 LINE L1 7831 7931 -30 1218 109 40 10 chr10 97289395 97289596 -43027169 + LTR48B-int LTR ERV1 4593 4799 -1532 204 111 0 0 chr10 97289606 97289642 -43027123 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1082 113 0 0 chr10 97289660 97289801 -43026964 - AluJb SINE Alu -171 141 1 6978 156 45 18 chr10 97289803 97290914 -43025851 + LTR48B-int LTR ERV1 4772 5928 -403 198 0 0 0 chr10 97290914 97290936 -43025829 + (TAA)n Simple_repeat Simple_repeat 3 24 0 6978 156 45 18 chr10 97290936 97291189 -43025576 + LTR48B-int LTR ERV1 5928 6173 -158 1672 190 144 68 chr10 97291285 97291719 -43025046 + LTR48B LTR ERV1 1 495 -149 710 165 17 0 chr10 97291719 97291865 -43024900 + FLAM_C SINE Alu 1 148 0 1672 190 144 68 chr10 97291865 97292028 -43024737 + LTR48B LTR ERV1 495 644 0 23 33 0 0 chr10 97294347 97294377 -43022388 + AT_rich Low_complexity Low_complexity 1 30 0 338 319 28 42 chr10 97294674 97294818 -43021947 + L3 LINE CR1 448 589 -988 1768 151 48 7 chr10 97294942 97295233 -43021532 - AluSx SINE Alu -9 303 1 908 307 154 23 chr10 97295454 97295972 -43020793 + L3 LINE CR1 640 1225 -352 2366 261 48 24 chr10 97296259 97296980 -43019785 - L1ME3A LINE L1 -9 6161 5459 13947 128 47 5 chr10 97296980 97298541 -43018224 + Tigger1 DNA MER2_type 1 1495 -923 1668 140 39 39 chr10 97298541 97298827 -43017938 + AluJo SINE Alu 12 297 -15 13947 128 47 5 chr10 97298827 97299069 -43017696 + Tigger1 DNA MER2_type 1495 1725 -693 2402 90 3 0 chr10 97299069 97299369 -43017396 + AluSp SINE Alu 2 302 -11 13947 128 47 5 chr10 97299369 97299884 -43016881 + Tigger1 DNA MER2_type 1725 2418 0 2366 261 48 24 chr10 97299884 97300393 -43016372 - L1ME3A LINE L1 -711 5459 4901 2411 91 3 0 chr10 97300411 97300720 -43016045 - AluSp SINE Alu -3 310 1 714 110 0 148 chr10 97300723 97300878 -43015887 - AluSq/x SINE Alu -181 132 1 2270 103 3 3 chr10 97302016 97302326 -43014439 - AluSx SINE Alu -2 310 1 326 151 0 0 chr10 97302642 97302695 -43014070 + Alu SINE Alu 1 53 -247 1006 136 32 0 chr10 97302696 97302850 -43013915 + AluJo/FRAM SINE Alu 129 287 -25 1058 274 108 22 chr10 97303120 97303792 -43012973 - L2 LINE L2 -1 3312 2593 360 234 99 0 chr10 97305973 97306084 -43010681 - L1MC4a LINE L1 -13 7795 7674 1897 176 0 0 chr10 97306086 97306388 -43010377 + AluSx SINE Alu 1 302 -10 2353 88 13 3 chr10 97306452 97306759 -43010006 + AluSp SINE Alu 1 310 -3 371 273 52 11 chr10 97306927 97307148 -43009617 - L1ME3 LINE L1 -336 5826 5618 1686 161 50 7 chr10 97307646 97307945 -43008820 - AluJb SINE Alu 0 312 1 2197 122 0 0 chr10 97307958 97308254 -43008511 - AluSq SINE Alu -17 296 1 24 53 0 0 chr10 97310969 97311007 -43005758 + AT_rich Low_complexity Low_complexity 1 38 0 2259 109 0 3 chr10 97312344 97312646 -43004119 - AluSx SINE Alu -10 302 2 2047 141 7 0 chr10 97312667 97312958 -43003807 - AluSx SINE Alu -15 297 5 504 252 31 8 chr10 97315422 97315549 -43001216 + L2 LINE L2 3184 3313 0 29 0 0 0 chr10 97316108 97316137 -43000628 + AT_rich Low_complexity Low_complexity 1 29 0 760 157 0 8 chr10 97316258 97316379 -43000386 - FLAM_A SINE Alu -13 120 1 1074 256 54 20 chr10 97316456 97316808 -42999957 - L1ME4a LINE L1 -248 5873 5510 308 71 0 0 chr10 97318860 97318902 -42997863 + MER57B LTR ERV1 326 367 -67 27 49 0 0 chr10 97318924 97318965 -42997800 + AT_rich Low_complexity Low_complexity 1 41 0 210 191 0 0 chr10 97320976 97321018 -42995747 + (CATA)n Simple_repeat Simple_repeat 3 44 0 330 338 90 38 chr10 97323788 97324078 -42992687 + L3 LINE CR1 1250 1554 -23 2352 100 0 0 chr10 97325078 97325387 -42991378 - AluSc SINE Alu 0 309 1 192 309 95 0 chr10 97325621 97325705 -42991060 - MIR3 SINE MIR -9 199 108 865 172 118 0 chr10 97326097 97326266 -42990499 - MER5A DNA MER1_type 0 189 1 663 261 49 106 chr10 97326291 97326640 -42990125 - MER102a DNA MER1_type 0 330 2 2168 208 65 5 chr10 97326683 97326915 -42989850 - MLT1F LTR MaLR -103 439 222 180 0 0 0 chr10 97326915 97326935 -42989830 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2168 208 65 5 chr10 97326935 97327116 -42989649 - MLT1F LTR MaLR -320 222 1 1297 192 42 63 chr10 97327120 97327434 -42989331 - AluJo SINE Alu 0 308 1 2074 112 0 7 chr10 97327447 97327756 -42989009 - AluSx SINE Alu 0 307 1 265 269 64 0 chr10 97328002 97328080 -42988685 + MER102a DNA MER1_type 239 321 -9 523 193 0 0 chr10 97328095 97328183 -42988582 + MER81 DNA DNA 1 88 -26 518 209 176 7 chr10 97328227 97328375 -42988390 + MER5A DNA MER1_type 10 182 -7 271 346 26 13 chr10 97328692 97328845 -42987920 - L1MC/D LINE L1 -2059 5749 5595 521 272 158 18 chr10 97329595 97329823 -42986942 - MIR SINE MIR -2 260 1 1917 141 3 18 chr10 97329891 97330175 -42986590 - AluSx SINE Alu -32 280 1 627 253 188 0 chr10 97330188 97330374 -42986391 - MIR SINE MIR -14 248 28 25 31 0 0 chr10 97330982 97331014 -42985751 + AT_rich Low_complexity Low_complexity 1 32 0 2490 88 7 0 chr10 97331751 97332059 -42984706 + AluSg SINE Alu 1 310 0 2387 97 0 0 chr10 97332801 97333101 -42983664 - AluSx SINE Alu -7 305 6 1518 204 61 39 chr10 97333146 97333509 -42983256 - MLT1A2 LTR MaLR -3 371 1 212 159 116 0 chr10 97333610 97333679 -42983086 - MIR SINE MIR -67 141 65 2318 104 3 0 chr10 97334101 97334398 -42982367 + AluSx SINE Alu 3 300 -12 2169 106 3 0 chr10 97334416 97334725 -42982040 + AluSx SINE Alu 1 310 0 52 30 0 0 chr10 97334771 97334837 -42981928 + AT_rich Low_complexity Low_complexity 1 66 0 1923 126 0 46 chr10 97335001 97335286 -42981479 - AluJb SINE Alu -39 273 2 380 141 0 14 chr10 97335723 97335794 -42980971 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 1843 154 10 0 chr10 97335801 97336094 -42980671 - AluSx SINE Alu -16 296 1 324 164 33 0 chr10 97336096 97336155 -42980610 - FAM SINE Alu -14 165 105 1648 72 5 0 chr10 97336155 97336362 -42980403 - THE1B LTR MaLR 0 364 157 2236 85 4 4 chr10 97336363 97336644 -42980121 + AluSq SINE Alu 1 281 -32 324 0 0 0 chr10 97336644 97336680 -42980085 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 538 253 13 53 chr10 97336700 97336925 -42979840 + L2 LINE L2 3098 3313 0 1274 253 8 4 chr10 97337010 97337275 -42979490 + MLT1E3 LTR MaLR 295 560 -64 1208 147 32 0 chr10 97337275 97337491 -42979274 - AluSc SINE Alu 0 304 83 1154 121 0 0 chr10 97337513 97337662 -42979103 - AluSg1 SINE Alu -159 150 2 286 222 63 0 chr10 97337662 97337725 -42979040 + MLT1E3 LTR MaLR 527 593 0 235 289 121 0 chr10 97337728 97337811 -42978954 - L2 LINE L2 -13 3259 3167 452 274 61 35 chr10 97337839 97338036 -42978729 + MIR SINE MIR 4 205 -57 469 214 0 10 chr10 97338659 97338762 -42978003 + L1ME4a LINE L1 5540 5641 -480 364 283 69 0 chr10 97338766 97338911 -42977854 + L1ME4a LINE L1 5672 5826 -295 809 291 16 16 chr10 97338964 97339208 -42977557 + MIR SINE MIR 19 262 0 2274 113 0 0 chr10 97339224 97339525 -42977240 - AluSx SINE Alu -11 301 1 294 263 61 18 chr10 97339596 97339710 -42977055 + L1ME4a LINE L1 6002 6120 -1 2337 96 3 0 chr10 97340644 97340936 -42975829 + AluSx SINE Alu 1 293 -19 10942 209 59 35 chr10 97340967 97341585 -42975180 - L1ME1 LINE L1 -5 6230 5629 1568 194 3 10 chr10 97341585 97341896 -42974869 - AluJb SINE Alu 0 309 1 10942 209 59 35 chr10 97341896 97342423 -42974342 - L1ME1 LINE L1 -606 5629 5116 2146 128 0 0 chr10 97342423 97342721 -42974044 - AluSx SINE Alu -14 298 1 10942 209 59 35 chr10 97342721 97343867 -42972898 - L1ME1 LINE L1 -1119 5116 4000 1421 188 80 7 chr10 97343867 97344143 -42972622 - AluJo SINE Alu -14 298 3 2009 150 0 16 chr10 97344145 97344160 -42972605 - AluSx SINE Alu -10 302 288 363 44 0 0 chr10 97344160 97344205 -42972560 + (ATG)n Simple_repeat Simple_repeat 1 45 0 2009 150 0 16 chr10 97344205 97344496 -42972269 - AluSx SINE Alu -24 288 1 1628 173 13 30 chr10 97344496 97344797 -42971968 - AluJo SINE Alu -16 296 1 10942 209 59 35 chr10 97344797 97345124 -42971641 - L1ME1 LINE L1 -2235 4000 3682 2505 84 0 0 chr10 97345124 97345433 -42971332 - AluY SINE Alu -2 309 1 10942 209 59 35 chr10 97345433 97345678 -42971087 - L1ME1 LINE L1 -2553 3682 3444 2328 92 3 7 chr10 97345678 97345982 -42970783 - AluSx SINE Alu -9 303 1 10942 209 59 35 chr10 97345982 97347192 -42969573 - L1ME1 LINE L1 -2791 3444 2077 490 182 15 45 chr10 97347194 97347313 -42969452 - L1ME1 LINE L1 -4355 2041 1925 357 24 0 0 chr10 97347313 97347355 -42969410 + (TA)n Simple_repeat Simple_repeat 1 42 0 490 182 15 45 chr10 97347355 97347367 -42969398 - L1ME1 LINE L1 -4471 1925 1914 306 277 139 0 chr10 97348009 97348146 -42968619 - L1ME1 LINE L1 -4528 1868 1713 2365 99 0 13 chr10 97348263 97348577 -42968188 + AluSg SINE Alu 1 310 0 2280 98 7 3 chr10 97348844 97349149 -42967616 - AluSg SINE Alu -4 306 1 2113 128 0 0 chr10 97349251 97349556 -42967209 - AluSx SINE Alu 0 305 1 352 323 0 0 chr10 97349626 97349719 -42967046 - MIR SINE MIR -71 137 45 2065 249 76 44 chr10 97350810 97351211 -42965554 - L1ME1 LINE L1 -4684 1712 1325 2420 81 0 3 chr10 97351211 97351509 -42965256 - AluY SINE Alu -14 297 1 2065 249 76 44 chr10 97351509 97351715 -42965050 - L1ME1 LINE L1 -5071 1325 1127 2194 133 0 3 chr10 97351715 97352023 -42964742 - AluSx SINE Alu -5 307 1 2065 249 76 44 chr10 97352023 97352350 -42964415 - L1ME1 LINE L1 -5269 1127 747 1308 242 3 7 chr10 97352370 97352663 -42964102 - L1ME1 LINE L1 -6066 330 39 2928 168 78 25 chr10 97352672 97353024 -42963741 - L1MB5 LINE L1 0 6174 5775 3314 119 81 35 chr10 97353024 97353364 -42963401 - LTR49 LTR ERV1 0 595 217 2229 93 33 0 chr10 97353364 97353664 -42963101 - AluSp SINE Alu -3 310 1 3314 119 81 35 chr10 97353664 97353892 -42962873 - LTR49 LTR ERV1 -378 217 1 2928 168 78 25 chr10 97353892 97354142 -42962623 - L1MB5 LINE L1 -399 5775 5540 448 273 0 37 chr10 97354145 97354170 -42962595 - L1MA10 LINE L1 0 6334 6310 1682 232 64 9 chr10 97354170 97354605 -42962160 - L1ME2 LINE L1 -12 6221 5763 242 275 12 0 chr10 97354601 97354681 -42962084 - L1ME2 LINE L1 -4010 2386 2306 * 1242 100 12 18 chr10 97354681 97354851 -42961914 - AluJb SINE Alu -143 169 1 247 256 12 24 chr10 97354897 97354979 -42961786 + HSMAR1 DNA Mariner 1207 1287 0 380 270 28 97 chr10 97354979 97355064 -42961701 - L1ME2 LINE L1 -4172 2224 2135 2234 128 0 0 chr10 97355064 97355361 -42961404 - AluSx SINE Alu -15 297 1 380 270 28 97 chr10 97355361 97355403 -42961362 - L1ME2 LINE L1 -4261 2135 2092 1753 142 42 42 chr10 97355403 97355714 -42961051 - AluSx SINE Alu -1 311 1 2352 116 0 0 chr10 97355716 97356027 -42960738 - AluSq SINE Alu -2 311 1 380 270 28 97 chr10 97356027 97356143 -42960622 - L1ME2 LINE L1 -4305 2091 1994 266 122 0 0 chr10 97357590 97357631 -42959134 - MIR SINE MIR -6 256 216 438 236 55 0 chr10 97358373 97358483 -42958282 + MER63A DNA MER1_type 95 210 0 352 277 161 0 chr10 97359108 97359238 -42957527 - MER117 DNA MER1_type -1 196 46 689 307 181 59 chr10 97359278 97359374 -42957391 + LTR50 LTR ERVL 21 104 -691 222 37 0 0 chr10 97359374 97359401 -42957364 + (GGA)n Simple_repeat Simple_repeat 3 29 0 689 307 181 59 chr10 97359401 97359916 -42956849 + LTR50 LTR ERVL 104 789 -6 342 252 118 8 chr10 97360214 97360341 -42956424 - MIR3 SINE MIR -28 180 40 720 172 0 22 chr10 97360515 97360649 -42956116 - FLAM_C SINE Alu -1 132 2 2448 89 0 13 chr10 97362041 97362355 -42954410 + AluSq SINE Alu 1 310 -3 1677 120 8 4 chr10 97363011 97363245 -42953520 - AluSx SINE Alu -18 294 60 844 213 151 13 chr10 97363345 97363570 -42953195 - MSTD LTR MaLR -140 256 1 1345 132 0 0 chr10 97363718 97363908 -42952857 + AluSg/x SINE Alu 121 310 -2 314 96 0 19 chr10 97364439 97364491 -42952274 + (TG)n Simple_repeat Simple_repeat 2 52 0 425 323 102 53 chr10 97365172 97365913 -42950852 + L2 LINE L2 2488 3270 -2 723 285 19 0 chr10 97366032 97366246 -42950519 - MIR SINE MIR -10 252 35 1057 105 0 0 chr10 97366697 97366830 -42949935 + AluSc SINE Alu 97 229 -80 407 315 46 0 chr10 97366895 97367025 -42949740 - L2 LINE L2 0 3272 3137 1998 157 3 0 chr10 97367195 97367489 -42949276 + AluJo SINE Alu 1 295 -17 442 286 35 25 chr10 97367699 97367898 -42948867 + L1ME4a LINE L1 5522 5722 -399 410 245 168 52 chr10 97367922 97368058 -42948707 + L1ME4a LINE L1 5776 5895 -226 2126 144 3 0 chr10 97368058 97368356 -42948409 - AluSx SINE Alu -13 299 1 410 245 168 52 chr10 97368356 97368529 -42948236 + L1ME4a LINE L1 5895 6121 0 218 261 0 0 chr10 97368863 97368909 -42947856 - L2 LINE L2 -16 3256 3211 477 283 26 40 chr10 97368959 97369041 -42947724 - MIR SINE MIR -66 196 115 2789 135 12 5 chr10 97369041 97369464 -42947301 - MSTB LTR MaLR 0 426 1 477 283 26 40 chr10 97369464 97369533 -42947232 - MIR SINE MIR -147 115 47 1818 177 0 0 chr10 97371226 97371520 -42945245 - AluJb SINE Alu -18 294 1 318 287 124 0 chr10 97371590 97371719 -42945046 - MIR SINE MIR 0 262 118 1722 163 137 38 chr10 97371753 97371940 -42944825 + LTR2B LTR ERV1 32 199 -291 231 36 0 0 chr10 97371940 97371968 -42944797 + (TTCTG)n Simple_repeat Simple_repeat 1 28 0 1722 163 137 38 chr10 97371968 97372197 -42944568 + LTR2B LTR ERV1 199 489 -1 245 176 59 0 chr10 97372209 97372260 -42944505 - MIR SINE MIR -178 84 31 2264 93 43 0 chr10 97372272 97372572 -42944193 + AluSp SINE Alu 1 313 0 913 234 106 58 chr10 97372630 97373148 -42943617 - L1MC5 LINE L1 -51 7910 7368 25 51 0 0 chr10 97373270 97373309 -42943456 + AT_rich Low_complexity Low_complexity 1 39 0 2296 91 17 3 chr10 97373388 97373685 -42943080 + AluSq SINE Alu 3 303 -10 1002 284 72 27 chr10 97374265 97374744 -42942021 - MLT1K LTR MaLR -4 584 34 532 246 22 22 chr10 97374767 97374901 -42941864 + MER94 DNA DNA 1 134 0 200 308 0 0 chr10 97374908 97374973 -42941792 - MIR SINE MIR -147 115 51 416 188 35 0 chr10 97375251 97375336 -42941429 + MIR SINE MIR 49 136 -126 1947 128 44 10 chr10 97377043 97377341 -42939424 - AluSx SINE Alu -4 308 1 26 30 0 0 chr10 97377421 97377454 -42939311 + AT_rich Low_complexity Low_complexity 1 33 0 235 266 113 16 chr10 97377607 97377731 -42939034 - L1ME4a LINE L1 -3 6118 5983 443 255 114 5 chr10 97377733 97377917 -42938848 - L1ME4a LINE L1 -210 5911 5708 328 62 36 232 chr10 97378922 97378956 -42937809 - MER53 DNA DNA 0 189 150 2504 69 0 0 chr10 97378956 97379245 -42937520 - AluSc SINE Alu -20 289 1 1639 179 7 7 chr10 97379247 97379526 -42937239 - AluJo SINE Alu -8 304 26 328 62 36 232 chr10 97379526 97379600 -42937165 - MER53 DNA DNA -40 149 100 255 280 49 28 chr10 97379921 97380064 -42936701 - L1ME LINE L1 -337 5784 5639 29 0 0 0 chr10 97380066 97380095 -42936670 + AT_rich Low_complexity Low_complexity 1 29 0 820 164 0 0 chr10 97380096 97380218 -42936547 - FLAM_C SINE Alu -19 124 3 2094 109 7 0 chr10 97381023 97381330 -42935435 - AluSx SINE Alu 0 310 2 1955 154 0 16 chr10 97382548 97382860 -42933905 - AluJo SINE Alu -5 307 1 207 267 193 37 chr10 97383156 97383291 -42933474 + MIR SINE MIR 20 175 -87 23 0 0 0 chr10 97383444 97383467 -42933298 + AT_rich Low_complexity Low_complexity 1 23 0 215 261 14 14 chr10 97383674 97383743 -42933022 + L2 LINE L2 2375 2443 -871 2035 136 7 0 chr10 97384117 97384411 -42932354 - AluSq SINE Alu -17 296 1 770 235 41 5 chr10 97384773 97384969 -42931796 + MIR SINE MIR 48 250 -12 200 350 120 0 chr10 97385139 97385239 -42931526 + L2 LINE L2 3149 3260 -12 2707 51 0 0 chr10 97385389 97385700 -42931065 + AluY SINE Alu 1 311 0 300 27 0 0 chr10 97385708 97385745 -42931020 + (TG)n Simple_repeat Simple_repeat 2 38 0 224 254 51 17 chr10 97386203 97386262 -42930503 - L2 LINE L2 -1 3312 3252 298 327 9 0 chr10 97387273 97387386 -42929379 + MIR SINE MIR 74 187 -75 3251 164 40 35 chr10 97388059 97388689 -42928076 + LTR27 LTR ERV1 4 636 0 2378 107 0 0 chr10 97389094 97389402 -42927363 + AluSq SINE Alu 6 313 0 290 180 0 0 chr10 97389434 97389484 -42927281 + MIR SINE MIR 213 262 0 351 0 0 0 chr10 97389625 97389664 -42927101 + (CA)n Simple_repeat Simple_repeat 2 40 0 545 242 102 6 chr10 97390262 97390419 -42926346 - MIR SINE MIR -89 173 2 715 268 216 35 chr10 97392576 97393094 -42923671 - MLT1L LTR MaLR -2 613 2 2196 123 0 3 chr10 97393175 97393476 -42923289 + AluSx SINE Alu 1 300 -12 2342 171 112 4 chr10 97393523 97393979 -42922786 - MLT1D LTR MaLR 0 505 1 506 273 53 18 chr10 97394561 97394788 -42921977 - LTR16C LTR ERVL -15 476 242 431 232 221 32 chr10 97395726 97395941 -42920824 - MIR SINE MIR -24 238 2 294 317 41 24 chr10 97396243 97396366 -42920399 - MLT1J LTR MaLR -294 217 93 494 265 52 19 chr10 97396412 97396623 -42920142 + L1M4 LINE L1 3761 3978 -2168 * 1995 215 2 2 chr10 97396608 97397031 -42919734 + L1MB5 LINE L1 4397 4819 -1327 1736 188 18 83 chr10 97397033 97397340 -42919425 - MLT1A2 LTR MaLR 0 374 97 1882 170 96 8 chr10 97397340 97397704 -42919061 + MSTD LTR MaLR 1 396 0 1736 188 18 83 chr10 97397704 97397795 -42918970 - MLT1A2 LTR MaLR -277 97 2 572 217 29 14 chr10 97397795 97397933 -42918832 + L1MB5 LINE L1 4816 4955 -1191 731 167 50 0 chr10 97397935 97398055 -42918710 + FLAM_C SINE Alu 2 127 -16 4242 197 66 2 chr10 97398058 97399204 -42917561 + L1MB5 LINE L1 4951 6163 -11 459 35 0 0 chr10 97399213 97399270 -42917495 + (CA)n Simple_repeat Simple_repeat 1 57 0 385 298 61 15 chr10 97399306 97399504 -42917261 + L1M4 LINE L1 3962 4168 -1978 224 332 136 5 chr10 97399711 97399925 -42916840 - L2 LINE L2 -1299 2015 1774 2360 112 0 0 chr10 97400135 97400447 -42916318 + AluSx SINE Alu 1 312 0 762 108 18 0 chr10 97400621 97400732 -42916033 + AluSq/x SINE Alu 24 136 -176 1405 102 0 35 chr10 97400732 97400929 -42915836 + AluSg/x SINE Alu 104 293 -19 2487 158 23 30 chr10 97401374 97401734 -42915031 + MSTB LTR MaLR 1 359 -67 2216 119 7 0 chr10 97401734 97402028 -42914737 + AluSx SINE Alu 1 296 -16 2487 158 23 30 chr10 97402028 97402096 -42914669 + MSTB LTR MaLR 359 426 0 2590 126 54 5 chr10 97402345 97402751 -42914014 + MSTB LTR MaLR 1 426 0 2424 97 39 28 chr10 97402787 97403147 -42913618 + THE1B LTR MaLR 1 364 0 198 302 32 0 chr10 97403351 97403414 -42913351 - L2 LINE L2 -298 2974 2910 197 283 50 0 chr10 97403511 97403571 -42913194 - L2 LINE L2 -564 2750 2688 1024 180 15 10 chr10 97403572 97403772 -42912993 + L1MC1 LINE L1 6122 6322 -11 391 292 47 41 chr10 97404298 97404469 -42912296 + MIR SINE MIR 65 236 -26 1921 147 0 4 chr10 97405178 97405457 -42911308 + AluJo SINE Alu 5 282 -30 1745 214 105 35 chr10 97405807 97406578 -42910187 - L1ME LINE L1 -3414 2968 2195 307 289 30 56 chr10 97406578 97406841 -42909924 - L1ME LINE L1 -4860 1420 1166 1335 82 0 27 chr10 97406849 97407033 -42909732 - AluSq SINE Alu -1 312 134 204 40 0 0 chr10 97407033 97407058 -42909707 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1654 171 3 38 chr10 97407058 97407350 -42909415 - AluJb SINE Alu -30 282 1 588 218 110 72 chr10 97407350 97407740 -42909025 - L1ME LINE L1 -5090 1282 878 6165 85 31 2 chr10 97407743 97408965 -42907800 - L1PA13 LINE L1 0 6163 4932 834 293 39 50 chr10 97409212 97409670 -42907095 - L1ME LINE L1 -5543 829 377 1123 183 154 97 chr10 97409787 97410170 -42906595 - LTR16C LTR ERVL -8 483 79 895 203 33 52 chr10 97410361 97410573 -42906192 - AluJo SINE Alu -102 210 3 467 325 52 37 chr10 97410574 97410845 -42905920 + L2 LINE L2 2990 3264 -49 225 94 0 0 chr10 97410863 97410895 -42905870 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2565 137 29 9 chr10 97410939 97411037 -42905728 + L1MB3 LINE L1 5727 5822 -361 2163 131 7 0 chr10 97411037 97411342 -42905423 + AluSx SINE Alu 1 307 -5 2565 137 29 9 chr10 97411342 97411663 -42905102 + L1MB3 LINE L1 5822 6158 -25 1873 153 143 16 chr10 97411663 97412042 -42904723 - MSTA LTR MaLR 0 428 2 2565 137 29 9 chr10 97412042 97412067 -42904698 + L1MB3 LINE L1 6158 6181 -2 2004 127 0 0 chr10 97412215 97412483 -42904282 - AluSx SINE Alu -44 268 1 2119 100 32 0 chr10 97412487 97412768 -42903997 - AluSp SINE Alu -23 290 1 339 233 0 0 chr10 97412794 97412867 -42903898 + MIR SINE MIR 112 184 -78 2288 75 3 0 chr10 97412881 97413201 -42903564 - AluY SINE Alu 0 321 1 907 274 128 69 chr10 97413836 97414601 -42902164 + L1MEd LINE L1 547 1266 -5044 2288 92 41 0 chr10 97414601 97414896 -42901869 + AluSq SINE Alu 1 307 -6 1905 167 122 0 chr10 97414903 97415256 -42901509 - MSTD LTR MaLR 0 396 1 907 274 128 69 chr10 97415256 97415285 -42901480 + L1MEd LINE L1 1271 1297 -5013 2144 142 0 0 chr10 97415285 97415596 -42901169 + AluJb SINE Alu 1 311 -1 907 274 128 69 chr10 97415596 97416108 -42900657 + L1MEd LINE L1 1297 1997 -4313 1773 204 61 9 chr10 97416108 97416451 -42900314 + MLT1A1 LTR MaLR 1 361 -4 907 274 128 69 chr10 97416451 97416677 -42900088 + L1MEd LINE L1 1997 2208 -4102 310 304 47 27 chr10 97417233 97417381 -42899384 + MIR SINE MIR 46 196 -66 299 154 39 0 chr10 97417459 97417511 -42899254 - MIR3 SINE MIR -42 166 113 497 204 44 9 chr10 97417511 97417624 -42899141 + MIR SINE MIR 75 191 -71 360 0 0 0 chr10 97419941 97419981 -42896784 + (TG)n Simple_repeat Simple_repeat 1 40 0 322 301 68 0 chr10 97420342 97420498 -42896267 - MIR SINE MIR -58 204 39 2480 90 3 0 chr10 97420788 97421100 -42895665 - AluSp SINE Alu 0 313 1 2376 104 3 0 chr10 97421102 97421410 -42895355 - AluSp SINE Alu -4 309 1 268 302 88 98 chr10 97422762 97423080 -42893685 - L2 LINE L2 -39 3233 2919 200 254 134 0 chr10 97423705 97423772 -42892993 - MIR SINE MIR -76 186 111 2238 102 3 0 chr10 97423798 97424082 -42892683 + AluSx SINE Alu 1 285 -27 188 45 0 0 chr10 97424353 97424375 -42892390 + (T)n Simple_repeat Simple_repeat 1 22 0 253 325 89 13 chr10 97425949 97426106 -42890659 + MIR SINE MIR 82 250 -12 864 253 135 91 chr10 97426402 97426927 -42889838 - LTR67 LTR ERVL -8 549 2 1710 131 27 4 chr10 97427421 97427680 -42889085 + AluSx SINE Alu 42 306 -6 570 202 96 34 chr10 97427706 97427884 -42888881 + L1ME4a LINE L1 5543 5731 -390 6365 87 18 0 chr10 97427894 97429399 -42887366 - L1PA13 LINE L1 -1 6162 4630 2281 120 3 0 chr10 97429416 97429724 -42887041 - AluSx SINE Alu -2 310 2 842 93 0 0 chr10 97430301 97430419 -42886346 - L1PA13 LINE L1 -1797 4349 4232 360 238 48 54 chr10 97430600 97430768 -42885997 + L1ME4a LINE L1 5955 6121 0 373 183 140 21 chr10 97431437 97431530 -42885235 - L2 LINE L2 -15 3298 3195 1741 194 0 10 chr10 97431691 97432000 -42884765 + AluJo SINE Alu 1 306 -6 817 261 165 37 chr10 97432661 97433098 -42883667 - LTR33 LTR ERVL -8 513 21 227 229 21 0 chr10 97433310 97433358 -42883407 - L2 LINE L2 -1 3271 3223 369 200 283 7 chr10 97433756 97433901 -42882864 + MER112 DNA MER1_type 1 185 -75 759 142 0 0 chr10 97433911 97434024 -42882741 + FLAM_C SINE Alu 11 123 -20 288 315 0 0 chr10 97434031 97434120 -42882645 + MER112 DNA MER1_type 170 258 -2 267 296 51 0 chr10 97434702 97434800 -42881965 - MIR SINE MIR -104 158 56 2288 107 3 3 chr10 97435527 97435835 -42880930 + AluSp SINE Alu 1 308 -5 351 0 0 0 chr10 97436989 97437028 -42879737 + (T)n Simple_repeat Simple_repeat 1 39 0 230 255 39 0 chr10 97437813 97437864 -42878901 + L2 LINE L2 3128 3180 -92 303 253 42 0 chr10 97438580 97438675 -42878090 - MIR SINE MIR -13 249 151 512 249 75 25 chr10 97438832 97439173 -42877592 - MLT1J LTR MaLR -21 460 35 372 297 21 21 chr10 97439371 97439516 -42877249 - MER117 DNA MER1_type -52 145 1 2437 204 50 35 chr10 97439590 97439709 -42877056 + MLT1F1 LTR MaLR 1 117 -450 2539 77 0 0 chr10 97439709 97440019 -42876746 + AluSq SINE Alu 1 310 -3 2437 204 50 35 chr10 97440019 97440443 -42876322 + MLT1F1 LTR MaLR 117 552 -15 369 0 0 0 chr10 97440454 97440495 -42876270 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1262 87 0 0 chr10 97441528 97441720 -42875045 + AluSp SINE Alu 135 326 0 275 291 209 0 chr10 97441779 97441927 -42874838 + MIR SINE MIR 82 260 -2 559 232 106 14 chr10 97441971 97442178 -42874587 + HAL1 LINE L1 2248 2473 -34 261 289 54 48 chr10 97442287 97442453 -42874312 + L1ME4a LINE L1 5933 6099 -22 369 238 82 54 chr10 97442485 97442632 -42874133 + MIR3 SINE MIR 19 169 -39 885 177 55 0 chr10 97442710 97442874 -42873891 - MER5A DNA MER1_type 0 189 17 272 230 296 7 chr10 97442878 97443013 -42873752 - MIR SINE MIR -66 196 23 292 271 67 43 chr10 97444068 97444397 -42872368 + L1 LINE L1 2130 2466 -3680 249 248 159 0 chr10 97444576 97444689 -42872076 + L1 LINE L1 2722 2852 -3294 187 70 23 47 chr10 97444803 97444846 -42871919 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 560 256 111 55 chr10 97444900 97445628 -42871137 + L1 LINE L1 2857 3625 -2521 2411 201 99 84 chr10 97445629 97445732 -42871033 + L1MC5 LINE L1 6891 6991 -970 185 0 0 39 chr10 97445732 97445758 -42871007 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2411 201 99 84 chr10 97445758 97445841 -42870924 + L1MC5 LINE L1 6991 7071 -890 1736 137 8 0 chr10 97445841 97446096 -42870669 + AluJb SINE Alu 53 309 -3 2411 201 99 84 chr10 97446096 97446963 -42869802 + L1MC5 LINE L1 7071 7960 -1 402 363 0 14 chr10 97447199 97447345 -42869420 - MIR SINE MIR -113 149 6 281 213 50 25 chr10 97447448 97447528 -42869237 + MIR3 SINE MIR 82 163 -45 * 431 221 41 8 chr10 97447526 97447648 -42869117 + MIR SINE MIR 58 183 -79 282 200 145 62 chr10 97448159 97448304 -42868461 - L1ME4a LINE L1 -1 6120 5964 1156 130 85 0 chr10 97448442 97448642 -42868123 + MER20 DNA MER1_type 1 217 -2 1412 191 10 3 chr10 97449219 97449645 -42867120 - MLT1C LTR MaLR -6 461 1 402 79 0 0 chr10 97451462 97451525 -42865240 + (CATA)n Simple_repeat Simple_repeat 2 64 0 2390 82 6 13 chr10 97451977 97452292 -42864473 - AluSp SINE Alu 0 313 1 201 39 0 0 chr10 97453377 97453403 -42863362 + (TTC)n Simple_repeat Simple_repeat 1 26 0 823 325 18 7 chr10 97453554 97453828 -42862937 - LTR16C LTR ERVL -30 461 185 1571 220 37 77 chr10 97453833 97453940 -42862825 + MLT1C LTR MaLR 6 116 -351 2159 114 3 3 chr10 97453940 97454238 -42862527 + AluSx SINE Alu 1 298 -14 1571 220 37 77 chr10 97454238 97454611 -42862154 + MLT1C LTR MaLR 116 467 0 498 286 58 19 chr10 97454821 97455027 -42861738 + MIR SINE MIR 49 262 0 2263 106 3 0 chr10 97455063 97455366 -42861399 + AluSp SINE Alu 1 304 -9 201 338 104 13 chr10 97455388 97455465 -42861300 + MIR SINE MIR 24 107 -155 871 142 15 0 chr10 97455508 97455642 -42861123 + AluJo SINE Alu 1 136 -176 230 268 9 80 chr10 97456307 97456419 -42860346 + MER3 DNA MER1_type 51 154 -55 1297 173 21 0 chr10 97456432 97456675 -42860090 + L1MA5 LINE L1 6048 6295 -5 1923 126 7 93 chr10 97456687 97456921 -42859844 + MER3 DNA MER1_type 2234 2487 -137 2183 88 7 14 chr10 97456921 97457218 -42859547 + AluSq SINE Alu 1 295 -18 1923 126 7 93 chr10 97457218 97457320 -42859445 + MER3 DNA MER1_type 2487 2528 -96 1894 82 37 4 chr10 97457320 97457563 -42859202 - AluSg SINE Alu -6 304 54 1923 126 7 93 chr10 97457563 97457653 -42859112 + MER3 DNA MER1_type 2528 2624 0 244 291 39 19 chr10 97457664 97457767 -42858998 - MIR3 SINE MIR -6 202 98 220 189 27 27 chr10 97458634 97458708 -42858057 + CT-rich Low_complexity Low_complexity 2 75 0 203 284 105 21 chr10 97459768 97459863 -42856902 + MIR SINE MIR 43 145 -63 224 0 65 0 chr10 97460056 97460087 -42856678 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 875 103 9 0 chr10 97460094 97460210 -42856555 - AluSq/x SINE Alu -196 117 1 210 277 84 0 chr10 97460344 97460427 -42856338 + MIR SINE MIR 32 121 -87 492 244 65 91 chr10 97460775 97461050 -42855715 + L1MC4 LINE L1 7459 7726 -316 2083 133 39 51 chr10 97461070 97461279 -42855486 - MLT1B LTR MaLR -5 385 182 2327 124 0 0 chr10 97461279 97461586 -42855179 - AluSx SINE Alu -5 307 1 2083 133 39 51 chr10 97461586 97461766 -42854999 - MLT1B LTR MaLR -208 182 1 953 170 130 0 chr10 97461818 97462041 -42854724 + L1MC4 LINE L1 7791 8042 0 247 309 55 9 chr10 97462205 97462315 -42854450 + L2 LINE L2 3199 3313 0 402 111 0 0 chr10 97462317 97462371 -42854394 + MSTC LTR MaLR 1 54 -374 2336 207 4 2 chr10 97462372 97462865 -42853900 + L1P LINE L1 4836 5329 -817 1267 184 42 81 chr10 97462865 97463174 -42853591 + AluJo SINE Alu 1 297 -15 981 164 12 0 chr10 97463283 97463448 -42853317 + MSTC LTR MaLR 262 428 0 194 239 22 0 chr10 97464140 97464186 -42852579 + MIR3 SINE MIR 110 156 -52 258 319 145 22 chr10 97464452 97464590 -42852175 + MER91A DNA MER1_type 35 189 -7 359 252 129 13 chr10 97464762 97464917 -42851848 + L2 LINE L2 2577 2749 -565 356 194 0 14 chr10 97464967 97465039 -42851726 + L2 LINE L2 2997 3067 -246 221 273 47 109 chr10 97465279 97465407 -42851358 - MIR SINE MIR -59 149 30 642 210 0 0 chr10 97465781 97465900 -42850865 + FLAM_C SINE Alu 2 120 -23 216 0 0 0 chr10 97465905 97465929 -42850836 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 440 267 37 77 chr10 97465940 97466240 -42850525 - HAL1 LINE L1 -378 2129 1842 259 94 19 19 chr10 97467590 97467631 -42849134 + (TC)n Simple_repeat Simple_repeat 2 45 -9 2201 108 7 0 chr10 97467631 97467926 -42848839 - AluY SINE Alu -14 297 1 259 94 19 19 chr10 97467926 97467937 -42848828 + (TC)n Simple_repeat Simple_repeat 44 54 0 1961 123 26 26 chr10 97468034 97468344 -42848421 + AluSg SINE Alu 1 310 0 2438 185 151 61 chr10 97468440 97469329 -42847436 - LTR28 LTR ERV1 0 1020 2 3206 231 116 64 chr10 97469511 97471175 -42845590 + L1MC4 LINE L1 6224 7982 -60 2232 111 0 3 chr10 97471180 97471469 -42845296 + AluSx SINE Alu 1 288 -24 236 185 0 0 chr10 97471469 97471523 -42845242 + (TA)n Simple_repeat Simple_repeat 1 54 0 3079 99 30 7 chr10 97471629 97472063 -42844702 - MLT2A1 LTR ERVL 0 444 1 45649 63 11 9 chr10 97472063 97477662 -42839103 - HERVL-A1 LTR ERVL 0 5654 42 2305 118 3 0 chr10 97477662 97477966 -42838799 + AluSq SINE Alu 1 305 -8 45649 63 11 9 chr10 97477966 97478009 -42838756 - HERVL-A1 LTR ERVL -5612 42 1 2811 86 35 20 chr10 97478009 97478475 -42838290 - MLT2A1 LTR ERVL 0 453 1 547 273 10 10 chr10 97478819 97478995 -42837770 - MER5A DNA MER1_type 0 189 3 2376 90 3 3 chr10 97480001 97480301 -42836464 + AluSp SINE Alu 1 300 -13 305 194 0 32 chr10 97480329 97480391 -42836374 - L2 LINE L2 -36 3277 3218 2339 86 7 3 chr10 97480575 97480877 -42835888 + AluSq SINE Alu 1 303 -10 2228 102 3 7 chr10 97481654 97481948 -42834817 - AluSg SINE Alu -17 293 1 2228 115 0 10 chr10 97482186 97482491 -42834274 - AluSq SINE Alu -11 302 1 2131 151 0 0 chr10 97482595 97482907 -42833858 - AluSx SINE Alu 0 312 1 280 200 86 0 chr10 97483446 97483516 -42833249 + MIR SINE MIR 114 189 -73 336 348 17 0 chr10 97484038 97484156 -42832609 - MER103 DNA DNA -45 121 2 487 292 24 12 chr10 97484298 97484466 -42832299 + L3 LINE CR1 1213 1382 -195 810 291 50 9 chr10 97484607 97484926 -42831839 + L1ME3A LINE L1 5611 5942 -228 1870 192 51 40 chr10 97484991 97485037 -42831728 + L1MB8 LINE L1 5705 5749 -429 2311 99 0 0 chr10 97485037 97485330 -42831435 + AluSx SINE Alu 1 293 -19 1870 192 51 40 chr10 97485330 97485752 -42831013 + L1MB8 LINE L1 5749 6178 0 28 79 0 0 chr10 97485852 97485915 -42830850 + AT_rich Low_complexity Low_complexity 1 63 0 548 198 0 0 chr10 97486105 97486206 -42830559 - AluJb SINE Alu -90 222 122 499 277 120 0 chr10 97486324 97486508 -42830257 + MIR SINE MIR 57 262 0 651 248 139 10 chr10 97486513 97486715 -42830050 - L1MC/D LINE L1 -2007 5801 5574 228 340 21 21 chr10 97486734 97486878 -42829887 + L3 LINE CR1 1408 1551 -26 21 0 0 0 chr10 97487321 97487342 -42829423 + AT_rich Low_complexity Low_complexity 1 21 0 274 291 32 69 chr10 97488134 97488323 -42828442 - MER5A DNA MER1_type 0 189 8 373 264 193 0 chr10 97489243 97489383 -42827382 - MIR SINE MIR -13 249 83 332 228 228 0 chr10 97489500 97489627 -42827138 + MIR SINE MIR 2 157 -105 1258 86 0 0 chr10 97489681 97489832 -42826933 + AluSx SINE Alu 11 161 -151 937 205 41 5 chr10 97489839 97490034 -42826731 + AluJb SINE Alu 85 286 -26 213 65 0 0 chr10 97490034 97490065 -42826700 + (GA)n Simple_repeat Simple_repeat 1 31 0 183 184 0 61 chr10 97490065 97490114 -42826651 + MIR SINE MIR 213 258 -4 2517 74 0 0 chr10 97490846 97491157 -42825608 + AluY SINE Alu 1 311 0 458 203 14 84 chr10 97491557 97491700 -42825065 - MIR SINE MIR -111 151 19 197 293 60 52 chr10 97491964 97492080 -42824685 - MIR SINE MIR -80 182 66 371 114 32 211 chr10 97492217 97492303 -42824462 - Charlie4 DNA MER1_type -6 1955 1896 2975 137 2 6 chr10 97492303 97492779 -42823986 - L1MB3 LINE L1 -2 6181 5708 371 114 32 211 chr10 97492779 97492815 -42823950 - Charlie4 DNA MER1_type -65 1896 1855 204 260 24 16 chr10 97492815 97492938 -42823827 + (TA)n Simple_repeat Simple_repeat 1 124 0 1887 150 4 4 chr10 97492938 97493218 -42823547 - AluJo SINE Alu -24 288 9 948 152 24 0 chr10 97493351 97493516 -42823249 - Tigger3(Golem) DNA MER2_type -101 2928 2760 451 184 0 13 chr10 97493562 97493638 -42823127 - Tigger3(Golem) DNA MER2_type -2953 76 2 2292 100 10 0 chr10 97495097 97495398 -42821367 + AluSq SINE Alu 1 304 -9 585 118 59 0 chr10 97495409 97495494 -42821271 + 5S rRNA rRNA 1 90 -31 804 266 48 0 chr10 97495536 97495765 -42821000 - L1ME LINE L1 -341 5780 5541 2524 51 0 7 chr10 97495765 97496061 -42820704 - AluY SINE Alu -17 294 1 2205 118 0 3 chr10 97496135 97496432 -42820333 + AluSx SINE Alu 1 296 -16 2090 125 0 3 chr10 97496964 97497259 -42819506 + AluSq SINE Alu 1 294 -19 713 259 5 39 chr10 97497265 97497367 -42819398 + MIR SINE MIR 43 136 -126 1751 145 91 26 chr10 97497367 97497719 -42819046 + THE1C LTR MaLR 1 375 0 713 259 5 39 chr10 97497719 97497821 -42818944 + MIR SINE MIR 136 240 -22 2523 72 0 0 chr10 97497834 97498139 -42818626 - AluY SINE Alu -6 305 1 2449 95 3 0 chr10 97498139 97498445 -42818320 - AluSp SINE Alu -6 307 1 1173 146 13 49 chr10 97499257 97499483 -42817282 - MER20 DNA MER1_type -1 218 1 2329 87 0 16 chr10 97499484 97499795 -42816970 - AluY SINE Alu -4 307 2 2214 120 0 0 chr10 97499822 97500121 -42816644 - AluSq SINE Alu -14 299 1 1446 79 5 16 chr10 97500733 97500922 -42815843 - AluSq SINE Alu -126 187 1 589 319 26 53 chr10 97501225 97501632 -42815133 - L2 LINE L2 -233 3080 2688 667 107 68 0 chr10 97501632 97501735 -42815030 + AluSg/x SINE Alu 193 302 -8 339 284 177 60 chr10 97501754 97502155 -42814610 - L2 LINE L2 -929 2385 1938 366 337 82 5 chr10 97502214 97502398 -42814367 - L2 LINE L2 -243 3070 2873 203 371 32 0 chr10 97502395 97502519 -42814246 - L2 LINE L2 -1367 1947 1820 * 334 294 61 0 chr10 97502569 97502732 -42814033 + L1M4b LINE L1 23 195 -6664 1823 120 4 0 chr10 97503210 97503460 -42813305 + AluSx SINE Alu 1 251 -61 244 321 0 12 chr10 97503641 97503722 -42813043 - L2 LINE L2 -2938 376 297 228 169 24 36 chr10 97504154 97504237 -42812528 + CT-rich Low_complexity Low_complexity 2 83 0 1948 103 65 10 chr10 97505407 97505698 -42811067 + AluSq SINE Alu 1 307 -6 368 275 42 58 chr10 97505878 97506067 -42810698 + MER117 DNA MER1_type 1 186 -11 434 303 136 23 chr10 97506078 97506299 -42810466 + MIR SINE MIR 17 262 0 591 277 91 16 chr10 97506319 97506561 -42810204 - MIR SINE MIR -2 260 1 1156 87 7 0 chr10 97506725 97506874 -42809891 + AluSg/x SINE Alu 157 306 -6 2057 98 11 7 chr10 97506877 97507152 -42809613 - AluSq SINE Alu -37 276 1 2369 97 3 6 chr10 97508518 97508829 -42807936 + AluSq SINE Alu 1 310 -3 1190 191 76 18 chr10 97509569 97509846 -42806919 - MLT1C LTR MaLR -2 465 173 2527 73 0 6 chr10 97509894 97510207 -42806558 - AluY SINE Alu 0 311 1 2199 133 3 0 chr10 97510207 97510514 -42806251 - AluSx SINE Alu -3 309 1 452 144 104 198 chr10 97510514 97510736 -42806029 - MLT1C LTR MaLR -261 206 6 2066 146 3 0 chr10 97510942 97511244 -42805521 - AluSx SINE Alu -9 303 1 2349 136 74 5 chr10 97511889 97512293 -42804472 - MSTB1 LTR MaLR 0 432 1 1935 149 3 0 chr10 97512518 97512824 -42803941 - AluSx SINE Alu 0 307 1 1896 99 73 7 chr10 97513638 97513910 -42802855 - AluSq SINE Alu -23 290 1 211 324 206 7 chr10 97513922 97514058 -42802707 - L2 LINE L2 -1 3271 3109 180 111 0 0 chr10 97514217 97514244 -42802521 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 2356 111 0 0 chr10 97514297 97514603 -42802162 + AluSx SINE Alu 1 306 -6 280 333 18 18 chr10 97514938 97515049 -42801716 - MER5B DNA MER1_type -1 177 67 1190 189 5 23 chr10 97515658 97515875 -42800890 + AluJb SINE Alu 1 213 -99 690 260 18 0 chr10 97516676 97516845 -42799920 + MIR3 SINE MIR 32 203 -5 2287 124 0 0 chr10 97516862 97517161 -42799604 + AluSx SINE Alu 1 299 -13 2164 87 19 32 chr10 97517212 97517523 -42799242 - AluSx SINE Alu -5 307 1 2238 250 91 59 chr10 97517598 97518710 -42798055 - L2 LINE L2 -1293 2021 875 2225 112 0 10 chr10 97518716 97519054 -42797711 + AluSx SINE Alu 1 312 0 650 202 198 46 chr10 97519068 97519195 -42797570 + MLT1C LTR MaLR 6 112 -355 2034 145 0 7 chr10 97519195 97519505 -42797260 - AluSx SINE Alu -4 308 1 650 202 198 46 chr10 97519505 97519615 -42797150 + MLT1C LTR MaLR 112 279 -188 244 140 40 20 chr10 97519716 97519766 -42796999 + Alu SINE Alu 244 294 -6 331 98 0 20 chr10 97519832 97519883 -42796882 + MER61A LTR ERV1 3 52 -291 191 389 0 0 chr10 97520007 97520097 -42796668 + L2 LINE L2 3182 3271 -1 181 259 19 0 chr10 97520447 97520501 -42796264 + MIR3 SINE MIR 131 185 -23 207 329 0 0 chr10 97521069 97521151 -42795614 - L2 LINE L2 -727 2587 2506 606 294 14 87 chr10 97521186 97521530 -42795235 + L2 LINE L2 2952 3270 -2 225 240 0 0 chr10 97521629 97521679 -42795086 - L2 LINE L2 -1 3271 3222 279 273 139 29 chr10 97521717 97521889 -42794876 + MER117 DNA MER1_type 1 191 -6 293 343 0 28 chr10 97521965 97522143 -42794622 - L2 LINE L2 -173 3099 2927 1324 237 81 43 chr10 97523005 97523645 -42793120 + L1ME2 LINE L1 5468 6162 -2 746 158 24 16 chr10 97523672 97523925 -42792840 + GA-rich Low_complexity Low_complexity 1 254 0 282 263 53 0 chr10 97525321 97525397 -42791368 + MIR SINE MIR 79 158 -104 321 277 0 32 chr10 97525574 97525668 -42791097 - MER5B DNA MER1_type -87 91 1 2321 94 3 0 chr10 97525921 97526218 -42790547 - AluSg SINE Alu -12 298 1 258 81 0 0 chr10 97526275 97526312 -42790453 + (TG)n Simple_repeat Simple_repeat 2 38 0 2045 116 10 27 chr10 97526373 97526674 -42790091 - AluSx SINE Alu -16 296 1 631 116 0 0 chr10 97526704 97526790 -42789975 + AluS SINE Alu 2 87 -225 2092 106 0 7 chr10 97526895 97527170 -42789595 - AluSx SINE Alu -39 273 1 2031 57 0 4 chr10 97527207 97527454 -42789311 + AluY SINE Alu 54 299 -12 2416 81 0 3 chr10 97528636 97528932 -42787833 - AluSq SINE Alu -18 295 1 205 341 11 11 chr10 97530065 97530156 -42786609 + L3b LINE CR1 1374 1464 -119 414 240 149 13 chr10 97530863 97531017 -42785748 - MER5B DNA MER1_type -2 176 2 1527 112 69 0 chr10 97531623 97531855 -42784910 - L1PB3 LINE L1 0 6154 5907 266 148 37 12 chr10 97531900 97531947 -42784818 + A-rich Low_complexity Low_complexity 4 55 -31 1046 85 72 0 chr10 97531947 97532100 -42784665 + L1PA7 LINE L1 5991 6154 0 266 148 37 12 chr10 97532100 97532133 -42784632 + A-rich Low_complexity Low_complexity 55 86 0 507 296 56 44 chr10 97532525 97532775 -42783990 - MIR SINE MIR -3 259 7 180 286 0 0 chr10 97532822 97532864 -42783901 - L2 LINE L2 -17 3255 3214 248 292 9 53 chr10 97533789 97533902 -42782863 + L2 LINE L2 3204 3311 -2 285 331 40 8 chr10 97534131 97534255 -42782510 + L2 LINE L2 3136 3263 -9 361 257 34 63 chr10 97534449 97534624 -42782141 + MIR SINE MIR 46 215 -47 2959 6 0 0 chr10 97534625 97534938 -42781827 + AluYb8 SINE Alu 1 313 -5 268 243 168 0 chr10 97535289 97535396 -42781369 + MIR SINE MIR 14 138 -124 317 249 20 50 chr10 97536272 97536372 -42780393 + MIR3 SINE MIR 77 174 -34 320 319 84 18 chr10 97537520 97537667 -42779098 + MIR SINE MIR 38 200 -62 2163 147 0 0 chr10 97537667 97537967 -42778798 - AluSx SINE Alu -12 300 1 320 319 84 18 chr10 97537967 97537999 -42778766 + MIR SINE MIR 200 228 -34 400 351 78 16 chr10 97539477 97539722 -42777043 + MIR SINE MIR 3 262 0 333 87 22 0 chr10 97540375 97540421 -42776344 - MER75 DNA T2_type -5 509 463 1981 145 0 10 chr10 97541447 97541743 -42775022 + AluSx SINE Alu 1 293 -19 356 111 14 0 chr10 97541992 97542064 -42774701 + (TC)n Simple_repeat Simple_repeat 2 74 0 859 264 14 5 chr10 97542070 97542282 -42774483 + MIR SINE MIR 1 214 -48 1821 109 60 8 chr10 97542672 97542939 -42773826 + AluSx SINE Alu 1 281 -31 281 67 0 22 chr10 97542943 97542988 -42773777 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 282 313 52 8 chr10 97543206 97543340 -42773425 - MIR3 SINE MIR -39 169 30 186 43 0 0 chr10 97544237 97544260 -42772505 + (ATG)n Simple_repeat Simple_repeat 2 24 0 296 296 19 28 chr10 97544291 97544399 -42772366 - L2 LINE L2 -6 3307 3201 416 239 86 8 chr10 97544796 97544913 -42771852 - L2 LINE L2 -5 3308 3183 6722 73 25 1 chr10 97545326 97546325 -42770440 + L1PA10 LINE L1 5149 6168 0 286 311 109 8 chr10 97546491 97546610 -42770155 + MIR3 SINE MIR 15 145 -63 215 309 45 0 chr10 97546688 97546798 -42769967 - MIR SINE MIR -23 239 125 746 209 76 6 chr10 97546903 97547075 -42769690 - MER5A DNA MER1_type -1 188 5 408 329 70 33 chr10 97547643 97547886 -42768879 + MIR SINE MIR 11 262 0 1744 150 98 0 chr10 97548404 97548711 -42768054 - MER1B DNA MER1_type 0 337 1 431 167 13 0 chr10 97549149 97549227 -42767538 - MER116 DNA Mariner -1 79 1 2356 98 0 3 chr10 97549316 97549613 -42767152 - AluSg SINE Alu -14 296 1 2228 112 3 0 chr10 97549615 97549909 -42766856 - AluSx SINE Alu -16 296 2 852 278 147 33 chr10 97550010 97550669 -42766096 + L1MC4a LINE L1 5317 6050 -1758 1839 154 11 3 chr10 97550749 97551035 -42765730 + AluJo SINE Alu 1 288 -24 284 145 81 0 chr10 97552789 97552851 -42763914 - L1MB7 LINE L1 0 6184 6118 547 277 13 19 chr10 97552870 97553029 -42763736 + MIR SINE MIR 1 158 -104 1942 195 68 14 chr10 97553030 97553456 -42763309 + LTR40b LTR ERVL 1 449 -13 250 252 68 78 chr10 97553463 97553566 -42763199 + MIR SINE MIR 156 257 -5 332 327 35 0 chr10 97554078 97554191 -42762574 + MIR SINE MIR 74 190 -72 244 271 0 0 chr10 97555930 97555989 -42760776 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 266 176 20 0 chr10 97556000 97556051 -42760714 - L2 LINE L2 0 3272 3221 180 0 0 0 chr10 97556478 97556498 -42760267 + (T)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr10 97556624 97556644 -42760121 + (TG)n Simple_repeat Simple_repeat 2 21 0 6021 171 28 79 chr10 97557323 97557682 -42759083 + Charlie1a DNA MER1_type 1 377 -2384 1820 157 20 10 chr10 97557682 97557982 -42758783 - AluJb SINE Alu -9 303 1 6021 171 28 79 chr10 97557982 97559139 -42757626 + Charlie1a DNA MER1_type 377 1440 -15 724 210 45 65 chr10 97561174 97561235 -42755530 - MIR SINE MIR -8 254 193 3421 39 0 2 chr10 97561235 97561642 -42755123 - L1PA6 LINE L1 -7 6147 5742 724 210 45 65 chr10 97561642 97561811 -42754954 - MIR SINE MIR -69 193 31 465 301 151 5 chr10 97562840 97563059 -42753706 + MIR SINE MIR 3 253 -9 235 176 39 0 chr10 97563060 97563111 -42753654 + (CAT)n Simple_repeat Simple_repeat 1 53 0 383 282 45 0 chr10 97563755 97563865 -42752900 + MIR3 SINE MIR 78 192 -16 2281 209 84 59 chr10 97564848 97565524 -42751241 + L1MC4a LINE L1 6106 6798 -1010 426 175 0 0 chr10 97566025 97566105 -42750660 + (TA)n Simple_repeat Simple_repeat 1 80 0 1995 130 10 10 chr10 97566105 97566397 -42750368 - AluSx SINE Alu -20 292 1 734 271 80 39 chr10 97566745 97567106 -42749659 + MLT1J LTR MaLR 36 411 -100 204 245 0 0 chr10 97568021 97568070 -42748695 + L2 LINE L2 3179 3227 -86 236 239 64 83 chr10 97568122 97568231 -42748534 - MIR SINE MIR -73 135 28 280 289 16 23 chr10 97568943 97569071 -42747694 + L1ME4a LINE L1 5672 5798 -2010 2291 97 3 0 chr10 97569136 97569424 -42747341 + AluSx SINE Alu 1 289 -23 232 240 31 52 chr10 97569476 97569572 -42747193 + L1ME4a LINE L1 5954 6047 -74 985 181 35 0 chr10 97569610 97569781 -42746984 - AluJb SINE Alu -2 310 134 360 68 0 0 chr10 97570233 97570277 -42746488 - L1M3 LINE L1 -510 5673 5630 2231 100 0 10 chr10 97570277 97570578 -42746187 - AluSx SINE Alu -14 298 1 215 180 20 20 chr10 97570780 97570830 -42745935 - MER5B DNA MER1_type 0 178 129 2318 107 0 13 chr10 97571739 97572048 -42744717 + AluSq SINE Alu 1 305 -8 23 0 0 0 chr10 97573077 97573100 -42743665 + AT_rich Low_complexity Low_complexity 1 23 0 235 276 17 0 chr10 97576009 97576067 -42740698 + MIR3 SINE MIR 102 160 -48 421 268 0 27 chr10 97576121 97576233 -42740532 + MER117 DNA MER1_type 59 167 -30 22 70 0 0 chr10 97576984 97577027 -42739738 + AT_rich Low_complexity Low_complexity 1 43 0 550 315 99 13 chr10 97577224 97577526 -42739239 + L3 LINE CR1 1231 1558 -19 259 331 73 33 chr10 97578216 97578367 -42738398 - MIR3 SINE MIR -8 200 44 2167 130 0 13 chr10 97578687 97579002 -42737763 + AluSq SINE Alu 1 311 -2 21 0 0 0 chr10 97579110 97579131 -42737634 + AT_rich Low_complexity Low_complexity 1 21 0 193 296 86 0 chr10 97579701 97579782 -42736983 + MIR SINE MIR 106 193 -69 308 211 113 23 chr10 97580907 97581040 -42735725 - HAL1 LINE L1 -136 2371 2227 189 107 0 0 chr10 97581465 97581493 -42735272 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1962 128 0 14 chr10 97581495 97581784 -42734981 - AluSx SINE Alu -27 285 1 2635 58 0 0 chr10 97581842 97582153 -42734612 - AluY SINE Alu 0 311 1 297 119 15 30 chr10 97582263 97582330 -42734435 + (TA)n Simple_repeat Simple_repeat 1 66 0 2269 93 0 3 chr10 97582556 97582846 -42733919 + AluSc SINE Alu 1 289 -20 33 0 0 0 chr10 97583623 97583656 -42733109 + AT_rich Low_complexity Low_complexity 1 33 0 413 253 103 23 chr10 97583753 97583927 -42732838 - MER5A DNA MER1_type -1 188 1 335 263 185 28 chr10 97585523 97585842 -42730923 + L2 LINE L2 2825 3193 -120 280 273 158 29 chr10 97585912 97586051 -42730714 - MIR SINE MIR -75 187 31 2184 125 0 0 chr10 97586984 97587280 -42729485 + AluSc SINE Alu 1 296 -13 727 168 91 49 chr10 97587280 97587447 -42729318 + AluSg/x SINE Alu 134 306 0 796 154 0 29 chr10 97587722 97587858 -42728907 - FLAM_C SINE Alu -1 132 1 1296 94 33 6 chr10 97588246 97588426 -42728339 - AluSg/x SINE Alu -7 303 119 375 23 0 0 chr10 97589180 97589224 -42727541 + (TG)n Simple_repeat Simple_repeat 1 44 0 183 277 31 0 chr10 97590409 97590474 -42726291 + L2 LINE L2 3184 3250 -22 204 40 0 0 chr10 97590710 97590735 -42726030 + (TCC)n Simple_repeat Simple_repeat 1 25 0 526 231 201 5 chr10 97590754 97590953 -42725812 - MIR SINE MIR -4 258 21 337 173 186 58 chr10 97591706 97591862 -42724903 - MER69A DNA AcHobo 0 177 2 682 186 8 0 chr10 97591991 97592120 -42724645 + FLAM_A SINE Alu 13 142 0 800 236 165 45 chr10 97592461 97592842 -42723923 - L1MC4 LINE L1 0 8042 7616 824 139 0 0 chr10 97592927 97593042 -42723723 - AluJb SINE Alu -194 118 4 454 262 44 27 chr10 97593042 97593225 -42723540 - L1MC4 LINE L1 -499 7543 7358 1254 100 12 0 chr10 97593246 97593416 -42723349 - AluSg/x SINE Alu -7 305 134 2267 102 0 3 chr10 97593416 97593710 -42723055 - AluSx SINE Alu -19 293 1 261 0 0 0 chr10 97593740 97593769 -42722996 + (TA)n Simple_repeat Simple_repeat 2 30 0 2051 141 13 7 chr10 97594595 97594900 -42721865 + AluSx SINE Alu 1 307 -5 2449 61 0 29 chr10 97594900 97595211 -42721554 + AluY SINE Alu 1 302 -9 630 219 32 0 chr10 97595499 97595622 -42721143 - FLAM_A SINE Alu -4 129 3 865 139 162 37 chr10 97595687 97595720 -42721045 + MER119 DNA MER1_type 341 369 -214 2082 89 46 13 chr10 97595720 97596022 -42720743 + AluSx SINE Alu 1 312 0 865 139 162 37 chr10 97596022 97596204 -42720561 + MER119 DNA MER1_type 368 583 0 282 182 0 0 chr10 97596344 97596410 -42720355 + CT-rich Low_complexity Low_complexity 1 66 0 2023 122 0 7 chr10 97596741 97597050 -42719715 - AluSx SINE Alu 0 307 1 232 166 92 11 chr10 97597298 97597371 -42719394 + MIR SINE MIR 61 139 -69 350 263 204 0 chr10 97597586 97597738 -42719027 - MIR SINE MIR -10 252 70 1288 117 24 15 chr10 97598319 97598524 -42718241 + AluSg/x SINE Alu 103 309 -1 1614 158 27 38 chr10 97598685 97598977 -42717788 + AluJb SINE Alu 2 290 -22 296 263 116 11 chr10 97599058 97599153 -42717612 + MIR3 SINE MIR 74 178 -30 2413 83 0 0 chr10 97600783 97601083 -42715682 - AluSg SINE Alu -9 301 2 303 308 19 0 chr10 97601163 97601267 -42715498 - MIR SINE MIR -60 202 97 3759 76 45 38 chr10 97601442 97601514 -42715251 - MER41A LTR ERV1 0 554 484 2127 145 0 0 chr10 97601514 97601825 -42714940 + AluSx SINE Alu 1 311 -1 3759 76 45 38 chr10 97601825 97601921 -42714844 - MER41A LTR ERV1 -70 484 390 2040 117 0 7 chr10 97601921 97602230 -42714535 - AluSg SINE Alu 0 307 1 3759 76 45 38 chr10 97602230 97602608 -42714157 - MER41A LTR ERV1 -164 390 1 1263 239 133 46 chr10 97603870 97604396 -42712369 - MER34C LTR ERV1 -1 584 13 2134 101 7 7 chr10 97604791 97605078 -42711687 - AluSq SINE Alu -26 287 1 788 152 29 7 chr10 97605100 97605238 -42711527 + MLT1A1 LTR MaLR 24 164 -201 225 65 0 0 chr10 97605618 97605649 -42711116 + (TG)n Simple_repeat Simple_repeat 1 31 0 2424 97 7 0 chr10 97605967 97606277 -42710488 + AluSx SINE Alu 1 312 0 281 274 29 10 chr10 97606411 97606513 -42710252 + MIR SINE MIR 50 153 -109 2424 85 7 0 chr10 97607116 97607612 -42709153 - AluSg SINE Alu 0 498 1 1093 75 0 0 chr10 97607612 97607745 -42709020 - AluSg SINE Alu -177 133 1 182 118 29 0 chr10 97608425 97608459 -42708306 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2095 113 28 0 chr10 97609004 97609286 -42707479 - AluSq SINE Alu -23 290 1 2232 117 0 0 chr10 97610885 97611184 -42705581 + AluSx SINE Alu 5 303 -9 2495 143 78 85 chr10 97611300 97611560 -42705205 - MER4A LTR ERV1 -2 598 338 2392 82 0 16 chr10 97611560 97611876 -42704889 - AluY SINE Alu 0 311 1 2495 143 78 85 chr10 97611876 97612096 -42704669 - MER4A LTR ERV1 -262 338 120 2021 123 34 3 chr10 97612096 97612389 -42704376 - AluSx SINE Alu -10 302 1 2495 143 78 85 chr10 97612389 97612509 -42704256 - MER4A LTR ERV1 -480 120 1 453 188 27 44 chr10 97613083 97613220 -42703545 + L1ME4a LINE L1 5519 5645 -476 196 327 0 0 chr10 97613277 97613329 -42703436 - L2 LINE L2 -74 3198 3147 386 228 77 130 chr10 97613343 97613544 -42703221 + L1ME4a LINE L1 5667 5877 -244 2481 72 0 0 chr10 97613544 97613835 -42702930 - AluSg SINE Alu -19 291 1 386 228 77 130 chr10 97613835 97613890 -42702875 + L1ME4a LINE L1 5877 5933 -188 1790 167 0 29 chr10 97613890 97614196 -42702569 + AluJb SINE Alu 1 297 -15 386 228 77 130 chr10 97614196 97614416 -42702349 + L1ME4a LINE L1 5933 6119 -2 1372 137 35 18 chr10 97614509 97614735 -42702030 - MER30 DNA MER1_type 0 230 1 973 273 81 20 chr10 97614741 97615239 -42701526 - L1ME3A LINE L1 -313 5857 5334 2100 140 70 43 chr10 97615932 97616135 -42700630 - L1MB3 LINE L1 -10 6173 5977 2289 97 0 3 chr10 97616135 97616434 -42700331 - AluSx SINE Alu -14 298 1 2100 140 70 43 chr10 97616434 97616645 -42700120 - L1MB3 LINE L1 -206 5977 5748 957 173 6 29 chr10 97616645 97616818 -42699947 - MLT1A1 LTR MaLR 0 365 197 2536 57 3 0 chr10 97616819 97617120 -42699645 - AluY SINE Alu -9 302 1 935 186 5 79 chr10 97617175 97617390 -42699375 - MLT1A1 LTR MaLR -166 199 1 1060 124 0 24 chr10 97617390 97617559 -42699206 - L1MB3 LINE L1 -442 5741 5577 1814 139 4 11 chr10 97617568 97617849 -42698916 - AluJo SINE Alu -18 294 16 503 239 58 7 chr10 97618075 97618213 -42698552 - MIR SINE MIR -10 252 108 1558 179 18 0 chr10 97620031 97620305 -42696460 - Tigger3(Golem) DNA MER2_type 0 3038 2760 451 184 0 13 chr10 97620351 97620427 -42696338 - Tigger3(Golem) DNA MER2_type -2953 76 2 2292 100 10 0 chr10 97621886 97622187 -42694578 + AluSq SINE Alu 1 304 -9 585 118 59 0 chr10 97622198 97622283 -42694482 + 5S rRNA rRNA 1 90 -31 814 265 47 0 chr10 97622325 97622554 -42694211 - L1ME LINE L1 -341 5780 5540 2600 41 0 0 chr10 97622554 97622848 -42693917 - AluY SINE Alu -17 294 1 297 119 15 30 chr10 97622958 97623025 -42693740 + (TA)n Simple_repeat Simple_repeat 1 66 0 2269 93 0 3 chr10 97623251 97623541 -42693224 + AluSc SINE Alu 1 289 -20 33 0 0 0 chr10 97624318 97624351 -42692414 + AT_rich Low_complexity Low_complexity 1 33 0 413 253 103 23 chr10 97624448 97624622 -42692143 - MER5A DNA MER1_type -1 188 1 335 263 185 28 chr10 97626218 97626537 -42690228 + L2 LINE L2 2825 3193 -120 280 273 158 29 chr10 97626607 97626746 -42690019 - MIR SINE MIR -75 187 31 2192 125 0 0 chr10 97627679 97627976 -42688789 + AluSc SINE Alu 1 297 -12 708 175 91 49 chr10 97627976 97628143 -42688622 + AluSg/x SINE Alu 132 304 0 803 153 0 29 chr10 97628415 97628552 -42688213 - FLAM_C SINE Alu 0 133 1 1267 97 34 6 chr10 97628940 97629116 -42687649 - AluSg/x SINE Alu -11 301 121 294 29 0 0 chr10 97629870 97629905 -42686860 + (TG)n Simple_repeat Simple_repeat 2 36 0 335 267 12 0 chr10 97631089 97631175 -42685590 + L2 LINE L2 3184 3270 -2 283 230 299 0 chr10 97631208 97631295 -42685470 - MER81 DNA DNA -1 113 1 204 40 0 0 chr10 97631329 97631354 -42685411 + (TCC)n Simple_repeat Simple_repeat 1 25 0 547 235 195 5 chr10 97631373 97631573 -42685192 - MIR SINE MIR -4 258 21 352 199 167 39 chr10 97632326 97632482 -42684283 - MER69A DNA AcHobo 0 177 2 682 186 8 0 chr10 97632611 97632740 -42684025 + FLAM_A SINE Alu 13 142 0 800 236 165 45 chr10 97633081 97633462 -42683303 - L1MC4 LINE L1 0 8042 7616 824 139 0 0 chr10 97633547 97633662 -42683103 - AluJb SINE Alu -194 118 4 454 278 42 26 chr10 97633662 97633853 -42682912 - L1MC4 LINE L1 -499 7543 7350 1065 143 12 0 chr10 97633866 97634034 -42682731 - AluSg/x SINE Alu -9 303 134 2267 102 0 3 chr10 97634034 97634328 -42682437 - AluSx SINE Alu -19 293 1 585 0 0 0 chr10 97634360 97634425 -42682340 + (TA)n Simple_repeat Simple_repeat 1 65 0 2034 142 13 7 chr10 97635252 97635555 -42681210 + AluSx SINE Alu 1 305 -7 2475 62 0 26 chr10 97635555 97635864 -42680901 + AluY SINE Alu 1 301 -10 630 219 32 0 chr10 97636152 97636275 -42680490 - FLAM_A SINE Alu -4 129 3 2129 92 46 0 chr10 97636373 97636657 -42680108 + AluSq SINE Alu 1 297 -16 251 129 459 24 chr10 97636696 97636781 -42679984 + MER69 DNA AcHobo 1 122 -1104 810 272 27 23 chr10 97638986 97639243 -42677522 + MIR SINE MIR 5 262 0 2083 168 14 8 chr10 97639273 97639636 -42677129 - MLT1A1 LTR MaLR 0 365 1 522 240 34 63 chr10 97640140 97640315 -42676450 - MIR3 SINE MIR -4 204 35 715 244 75 78 chr10 97641738 97641812 -42674953 - MLT1C LTR MaLR 0 467 394 1775 158 29 23 chr10 97641812 97642122 -42674643 + AluJo SINE Alu 1 312 0 715 244 75 78 chr10 97642122 97642354 -42674411 - MLT1C LTR MaLR -73 394 162 2200 123 0 7 chr10 97642358 97642659 -42674106 + AluSx SINE Alu 1 299 -13 772 129 0 129 chr10 97642709 97642856 -42673909 + FLAM_C SINE Alu 2 129 -4 235 321 32 48 chr10 97642906 97643155 -42673610 + L1M4 LINE L1 4807 5051 -1095 2281 102 0 6 chr10 97643187 97643500 -42673265 - AluY SINE Alu 0 311 1 235 167 0 0 chr10 97643715 97643757 -42673008 + L1M LINE L1 5313 5354 -2454 216 97 0 0 chr10 97644273 97644304 -42672461 + (TA)n Simple_repeat Simple_repeat 1 31 0 1835 156 3 36 chr10 97644304 97644611 -42672154 - AluJb SINE Alu -15 297 1 2286 109 3 6 chr10 97644969 97645282 -42671483 + AluSx SINE Alu 1 312 0 2093 111 3 66 chr10 97645298 97645632 -42671133 + AluSp SINE Alu 1 313 0 256 303 82 16 chr10 97645939 97646061 -42670704 + MIR SINE MIR 120 249 -13 212 130 0 87 chr10 97646027 97646073 -42670692 + L2 LINE L2 3261 3302 -11 * 249 108 0 0 chr10 97646182 97646219 -42670546 + (CA)n Simple_repeat Simple_repeat 1 37 0 652 219 6 37 chr10 97646296 97646349 -42670416 - MIR SINE MIR 0 262 209 3463 143 45 27 chr10 97646349 97646973 -42669792 - MER41B LTR ERV1 0 635 1 652 219 6 37 chr10 97646973 97647083 -42669682 - MIR SINE MIR -53 209 104 2054 155 0 0 chr10 97647165 97647456 -42669309 + AluSx SINE Alu 1 291 -21 233 288 0 0 chr10 97647485 97647544 -42669221 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 31 chr10 97647624 97647642 -42669123 + AT_rich Low_complexity Low_complexity 1 19 -12 2327 96 3 0 chr10 97647642 97647934 -42668831 + AluSx SINE Alu 1 293 -19 21 0 0 31 chr10 97647934 97647947 -42668818 + AT_rich Low_complexity Low_complexity 19 31 0 2280 84 3 29 chr10 97648990 97649301 -42667464 - AluSx SINE Alu -9 303 1 2182 97 10 3 chr10 97649502 97649790 -42666975 + AluSx SINE Alu 11 300 -12 481 248 21 14 chr10 97649803 97649944 -42666821 - L1ME4a LINE L1 -1 6120 5979 296 231 221 0 chr10 97650324 97650428 -42666337 + L2 LINE L2 3146 3272 0 241 232 58 0 chr10 97650759 97650828 -42665937 + MIR3 SINE MIR 85 157 -51 699 91 0 10 chr10 97650892 97650991 -42665774 + MER4A LTR ERV1 1 98 -566 1746 111 265 19 chr10 97650991 97651315 -42665450 + MER4A LTR ERV1 261 664 0 400 280 64 24 chr10 97651837 97652095 -42664670 - L1MEd LINE L1 -5163 969 713 2766 72 10 39 chr10 97652320 97652707 -42664058 + MER51B LTR ERV1 1 376 -1 308 244 32 57 chr10 97652780 97652903 -42663862 - MIR SINE MIR -57 205 86 422 264 70 23 chr10 97653686 97653815 -42662950 + MIR SINE MIR 51 185 -77 208 343 0 0 chr10 97653870 97653937 -42662828 - MIR SINE MIR -60 148 82 262 179 0 45 chr10 97653985 97654052 -42662713 + MIR SINE MIR 104 167 -95 839 199 136 0 chr10 97654100 97654291 -42662474 - MER46C DNA MER2_type -103 235 19 743 304 59 4 chr10 97654722 97654992 -42661773 - MER102b DNA MER1_type -20 321 37 333 172 65 32 chr10 97655020 97655113 -42661652 - MIR SINE MIR -13 249 154 268 254 68 17 chr10 97655114 97655232 -42661533 - LTR37B LTR ERV1 -147 321 198 1452 227 63 25 chr10 97655329 97655694 -42661071 - MLT1B LTR MaLR -8 382 4 500 252 13 26 chr10 97655695 97655846 -42660919 - LTR37B LTR ERV1 -313 155 7 2094 109 0 33 chr10 97656037 97656339 -42660426 + AluY SINE Alu 1 292 -19 2472 58 3 3 chr10 97656480 97656773 -42659992 + AluY SINE Alu 1 293 -18 216 279 29 100 chr10 97656794 97656934 -42659831 + L2 LINE L2 3142 3271 -1 225 180 0 0 chr10 97656939 97656989 -42659776 + (TGGA)n Simple_repeat Simple_repeat 2 51 0 859 159 0 0 chr10 97657190 97657322 -42659443 - FLAM_A SINE Alu -1 132 1 414 278 23 15 chr10 97657376 97657509 -42659256 - MIR SINE MIR -8 254 121 2299 121 0 6 chr10 97657544 97657858 -42658907 + AluSx SINE Alu 1 312 0 42 0 0 0 chr10 97657971 97658013 -42658752 + AT_rich Low_complexity Low_complexity 1 42 0 332 306 72 0 chr10 97658016 97658127 -42658638 - L2 LINE L2 -2 3311 3193 267 203 0 0 chr10 97658821 97658890 -42657875 + (TGGA)n Simple_repeat Simple_repeat 3 71 0 254 284 34 11 chr10 97659545 97659633 -42657132 + MIR SINE MIR 58 147 -61 2306 114 0 0 chr10 97659709 97660017 -42656748 - AluSg SINE Alu -2 308 1 1643 139 103 35 chr10 97660724 97661034 -42655731 - MER44D DNA MER2_type -8 601 1 2062 73 43 53 chr10 97661067 97661367 -42655398 - AluYa5 SINE Alu -14 297 1 204 259 0 0 chr10 97661950 97662004 -42654761 + MIR SINE MIR 114 167 -95 420 241 37 31 chr10 97662046 97662208 -42654557 - MIR SINE MIR -24 238 76 291 273 23 0 chr10 97662228 97662316 -42654449 + MIR SINE MIR 172 261 -1 340 286 48 0 chr10 97662320 97662425 -42654340 + L2 LINE L2 3194 3303 -10 2271 120 0 3 chr10 97662446 97662787 -42653978 - AluSc SINE Alu 0 340 1 552 315 54 5 chr10 97663049 97663233 -42653532 + MIR SINE MIR 8 200 -62 2320 119 0 0 chr10 97663320 97663630 -42653135 - AluSx SINE Alu -2 310 1 2278 106 17 0 chr10 97663635 97663937 -42652828 - AluSq SINE Alu -6 307 1 1978 153 0 0 chr10 97664097 97664402 -42652363 - AluSx SINE Alu 0 305 1 841 206 17 29 chr10 97664419 97664594 -42652171 + MER63A DNA MER1_type 2 174 -36 352 297 101 34 chr10 97664741 97664950 -42651815 + MIR SINE MIR 40 262 0 2403 85 0 10 chr10 97665267 97665573 -42651192 + AluSp SINE Alu 1 303 -10 2726 187 28 11 chr10 97666001 97666540 -42650225 - L1MB5 LINE L1 -36 6138 5591 2261 104 17 0 chr10 97667603 97667902 -42648863 + AluSc SINE Alu 1 304 -5 1320 56 0 0 chr10 97668118 97668278 -42648487 - L1PA3 LINE L1 -3 6152 5993 2384 93 0 0 chr10 97668704 97669005 -42647760 - AluSx SINE Alu 0 312 12 347 261 55 33 chr10 97669484 97669698 -42647067 - AluSx SINE Alu -113 189 3 1104 225 96 4 chr10 97669727 97669998 -42646767 + AluJo SINE Alu 2 297 -5 2410 95 3 0 chr10 97669999 97670304 -42646461 + AluSq SINE Alu 1 306 -7 1710 188 0 19 chr10 97670794 97671108 -42645657 + AluJo SINE Alu 1 308 -4 1990 112 57 0 chr10 97671108 97671404 -42645361 + AluSp SINE Alu 1 313 0 1741 167 38 0 chr10 97671484 97671777 -42644988 + AluJb SINE Alu 6 309 -3 29 84 0 0 chr10 97672201 97672272 -42644493 + AT_rich Low_complexity Low_complexity 1 71 0 312 283 112 7 chr10 97672624 97672776 -42643989 - MIR3 SINE MIR -33 175 8 313 314 68 0 chr10 97673354 97673472 -42643293 - MIR SINE MIR -114 148 23 1871 141 3 36 chr10 97673831 97674137 -42642628 - AluJb SINE Alu -15 297 2 448 254 10 91 chr10 97674137 97674165 -42642600 - MIR SINE MIR -69 193 164 1883 152 7 3 chr10 97674165 97674462 -42642303 + AluJb SINE Alu 1 298 -14 448 254 10 91 chr10 97674462 97674548 -42642217 - MIR SINE MIR -98 164 99 2175 110 21 0 chr10 97674548 97674839 -42641926 + AluSx SINE Alu 1 297 -15 448 254 10 91 chr10 97674839 97674920 -42641845 - MIR SINE MIR -163 99 13 280 313 117 33 chr10 97675481 97675695 -42641070 - MIR SINE MIR -29 233 2 183 80 0 0 chr10 97676462 97676487 -42640278 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 191 188 0 0 chr10 97676487 97676519 -42640246 - L2 LINE L2 -14 3299 3268 2235 105 3 13 chr10 97676575 97676889 -42639876 + AluSx SINE Alu 1 311 -1 2113 94 7 0 chr10 97676910 97677208 -42639557 + AluSq SINE Alu 4 303 0 213 241 250 28 chr10 97677389 97677497 -42639268 - L2 LINE L2 0 3313 3182 1997 109 77 0 chr10 97678189 97678463 -42638302 - AluSx SINE Alu -17 295 1 696 210 62 26 chr10 97678465 97678660 -42638105 - MIR SINE MIR -48 214 13 1793 149 26 42 chr10 97679367 97679488 -42637277 + AluJb SINE Alu 1 122 -190 2248 105 3 3 chr10 97679488 97679792 -42636973 - AluSx SINE Alu -8 304 1 1793 149 26 42 chr10 97679792 97679979 -42636786 + AluJb SINE Alu 122 304 -8 2525 128 45 53 chr10 97680037 97680505 -42636260 + MLT2C2 LTR ERVL 1 464 0 773 228 41 20 chr10 97681111 97681308 -42635457 - MIR SINE MIR -15 247 47 267 260 0 0 chr10 97681497 97681570 -42635195 + MIR SINE MIR 178 250 -12 1922 111 75 4 chr10 97681615 97681895 -42634870 - AluSx SINE Alu -1 311 12 634 237 0 26 chr10 97682769 97682781 -42633984 - MIR SINE MIR -91 171 160 1864 138 7 20 chr10 97682781 97683104 -42633661 + AluJb SINE Alu 1 312 0 634 237 0 26 chr10 97683104 97683247 -42633518 - MIR SINE MIR -102 160 20 2394 38 0 3 chr10 97683257 97683545 -42633220 - L1PA4 LINE L1 -3 6152 5866 3681 17 0 0 chr10 97683545 97683952 -42632813 + L1PA4 LINE L1 5475 5881 -274 457 255 272 0 chr10 97684099 97684283 -42632482 - MIR SINE MIR 0 262 29 204 339 51 8 chr10 97685021 97685139 -42631626 + MIR SINE MIR 20 142 -66 2154 127 0 3 chr10 97685206 97685506 -42631259 + AluSx SINE Alu 1 299 -13 247 269 0 54 chr10 97685891 97685984 -42630781 + MIR SINE MIR 59 146 -62 2277 103 3 6 chr10 97686035 97686347 -42630418 + AluSx SINE Alu 1 311 -1 218 302 0 0 chr10 97686370 97686433 -42630332 + MIR SINE MIR 176 238 -24 2341 101 7 3 chr10 97686483 97686791 -42629974 - AluSx SINE Alu -3 309 1 302 302 28 0 chr10 97686830 97686936 -42629829 + L2 LINE L2 3150 3258 -14 183 80 0 0 chr10 97687395 97687420 -42629345 + (T)n Simple_repeat Simple_repeat 1 25 0 266 230 0 40 chr10 97687609 97687683 -42629082 + MIR SINE MIR 98 168 -94 2342 98 0 0 chr10 97687696 97687993 -42628772 + AluSq SINE Alu 1 297 -16 858 177 12 10 chr10 97688284 97688471 -42628294 + L1M3 LINE L1 5411 5607 -576 2207 99 0 0 chr10 97688472 97688756 -42628009 + AluSx SINE Alu 27 310 -2 453 76 15 0 chr10 97688759 97688825 -42627940 + L1MB2 LINE L1 6103 6169 -2 374 309 67 0 chr10 97689014 97689179 -42627586 - MIR SINE MIR -28 234 59 242 239 0 30 chr10 97689403 97689470 -42627295 + MLT1K LTR MaLR 178 242 -346 193 304 80 29 chr10 97690412 97690550 -42626215 + L2 LINE L2 2906 3050 -222 210 214 54 0 chr10 97690766 97690822 -42625943 - MIR SINE MIR -57 205 147 2337 101 0 7 chr10 97690838 97691136 -42625629 - AluSq SINE Alu -15 298 3 1775 81 0 0 chr10 97692329 97692551 -42624214 - AluSc SINE Alu -2 307 86 212 303 45 0 chr10 97692755 97692844 -42623921 - MIR SINE MIR -91 171 79 2400 86 3 3 chr10 97693296 97693598 -42623167 + AluSq SINE Alu 1 302 -11 2472 82 0 0 chr10 97693653 97693956 -42622809 + AluSg SINE Alu 1 303 -7 43 35 0 0 chr10 97694205 97694262 -42622503 + AT_rich Low_complexity Low_complexity 1 57 0 238 246 0 18 chr10 97694292 97694349 -42622416 - L3 LINE CR1 -3 1574 1519 1608 157 44 27 chr10 97694649 97694942 -42621823 + AluJo SINE Alu 15 312 0 1125 95 0 0 chr10 97695225 97695372 -42621393 - AluSg/x SINE Alu -10 302 156 208 311 219 6 chr10 97695687 97695851 -42620914 - MIR3 SINE MIR 0 208 10 657 192 8 8 chr10 97696355 97696480 -42620285 + FLAM_C SINE Alu 1 125 -18 23 0 0 0 chr10 97696480 97696503 -42620262 + AT_rich Low_complexity Low_complexity 1 23 0 2370 107 0 0 chr10 97696554 97696862 -42619903 - AluSx SINE Alu -4 308 1 21 0 0 0 chr10 97697304 97697325 -42619440 + AT_rich Low_complexity Low_complexity 1 21 0 663 116 21 0 chr10 97697325 97697420 -42619345 - FRAM SINE Alu -50 126 30 430 197 66 58 chr10 97697463 97697609 -42619156 - MIR3 SINE MIR -39 169 28 558 99 0 0 chr10 97698899 97698990 -42617775 + (TA)n Simple_repeat Simple_repeat 1 91 0 2082 69 0 32 chr10 97699276 97699553 -42617212 - AluSc SINE Alu 0 309 42 332 140 0 0 chr10 97699606 97699663 -42617102 + MIR SINE MIR 93 149 -113 349 227 27 36 chr10 97700143 97700253 -42616512 - L1ME3A LINE L1 -94 6076 5968 2173 99 17 0 chr10 97700253 97700547 -42616218 - AluSq SINE Alu -14 299 1 210 259 19 0 chr10 97700687 97700741 -42616024 + (CATA)n Simple_repeat Simple_repeat 3 57 0 1364 266 62 31 chr10 97700752 97700911 -42615854 - L1ME3A LINE L1 -224 5946 5793 2369 93 0 0 chr10 97700911 97701212 -42615553 - AluSg SINE Alu -9 301 1 1364 266 62 31 chr10 97701212 97701566 -42615199 - L1ME3A LINE L1 -377 5793 5417 1510 196 75 7 chr10 97701675 97701956 -42614809 + AluJb SINE Alu 3 302 -10 655 226 0 0 chr10 97701971 97702104 -42614661 + FLAM_A SINE Alu 8 140 -2 278 204 41 20 chr10 97702113 97702211 -42614554 + L1ME LINE L1 5042 5141 -1005 956 244 62 10 chr10 97702222 97702527 -42614238 + L1ME LINE L1 5232 5552 -612 766 294 20 13 chr10 97702533 97702832 -42613933 - L1ME3A LINE L1 -1893 4253 3953 1053 157 12 12 chr10 97702840 97703012 -42613753 - FAM SINE Alu 0 49 1 862 276 55 36 chr10 97703019 97703133 -42613632 - L1ME3A LINE L1 -2165 3981 3871 2197 118 10 0 chr10 97703133 97703430 -42613335 - AluSx SINE Alu -12 300 1 862 276 55 36 chr10 97703430 97703736 -42613029 - L1ME3A LINE L1 -2275 3871 3553 1736 147 48 0 chr10 97703800 97704072 -42612693 + AluJo SINE Alu 6 290 -22 1359 230 118 59 chr10 97704082 97704522 -42612243 - HAL1 LINE L1 -52 2455 2043 333 0 0 0 chr10 97704522 97704559 -42612206 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1755 161 14 4 chr10 97704561 97704841 -42611924 - AluJb SINE Alu -29 283 1 1359 230 118 59 chr10 97704841 97705232 -42611533 - HAL1 LINE L1 -464 2043 1522 1259 270 102 10 chr10 97705400 97705792 -42610973 + LTR16A LTR ERVL 18 445 -5 407 212 47 0 chr10 97705801 97705886 -42610879 + HERV16 LTR ERVL 4 92 -4904 2528 263 82 33 chr10 97705946 97706864 -42609901 + HERV16 LTR ERVL 194 1156 -3840 258 251 214 65 chr10 97707698 97707913 -42608852 - L2 LINE L2 -6 3266 3020 735 238 72 27 chr10 97708124 97708347 -42608418 - MIR SINE MIR -10 252 20 793 118 0 131 chr10 97708499 97708652 -42608113 + FLAM_C SINE Alu 1 133 0 249 325 131 46 chr10 97709114 97709443 -42607322 - L2 LINE L2 -43 3229 2873 1861 158 48 3 chr10 97709683 97710062 -42606703 - Charlie5 DNA MER1_type 0 2624 2229 808 175 12 24 chr10 97710099 97710265 -42606500 - MER3 DNA MER1_type -55 154 3 533 217 0 0 chr10 97711344 97711459 -42605306 - FLAM_C SINE Alu -27 116 2 535 294 49 5 chr10 97711467 97711651 -42605114 - MIR SINE MIR -70 192 1 1515 115 4 100 chr10 97711948 97712227 -42604538 + AluJo SINE Alu 25 276 -36 242 115 250 0 chr10 97713010 97713062 -42603703 - MIR SINE MIR -111 151 87 2514 81 0 0 chr10 97713340 97713647 -42603118 - AluSx SINE Alu -5 307 1 2239 78 0 11 chr10 97713917 97714200 -42602565 + AluSx SINE Alu 1 280 -32 180 179 0 0 chr10 97714223 97714262 -42602503 + A-rich Low_complexity Low_complexity 1 39 0 256 301 39 53 chr10 97714767 97714973 -42601792 + L2 LINE L2 3104 3306 -7 272 243 29 73 chr10 97715549 97715599 -42601166 - L1ME3A LINE L1 -20 6150 6099 2288 110 0 0 chr10 97715599 97715900 -42600865 - AluSg SINE Alu -9 301 1 272 243 29 73 chr10 97715900 97715985 -42600780 - L1ME3A LINE L1 -71 6099 6021 926 185 0 6 chr10 97716842 97717004 -42599761 - FRAM SINE Alu -15 161 1 2036 104 76 3 chr10 97717487 97717776 -42598989 + AluSx SINE Alu 1 310 -2 835 315 121 42 chr10 97717938 97718551 -42598214 - L3 LINE CR1 -127 1450 790 25 51 0 0 chr10 97718553 97718592 -42598173 + AT_rich Low_complexity Low_complexity 1 39 0 280 300 50 10 chr10 97719908 97720008 -42596757 + MIR SINE MIR 20 123 -139 326 215 198 25 chr10 97720084 97720205 -42596560 + MIR SINE MIR 118 259 -3 2280 115 0 0 chr10 97720271 97720566 -42596199 + AluSx SINE Alu 1 295 -17 28 50 0 17 chr10 97720872 97720890 -42595875 + AT_rich Low_complexity Low_complexity 1 18 -41 2194 123 10 0 chr10 97720890 97721192 -42595573 - AluSx SINE Alu -7 305 1 28 50 0 17 chr10 97721192 97721233 -42595532 + AT_rich Low_complexity Low_complexity 18 59 0 1005 262 128 3 chr10 97721283 97721634 -42595131 - MLT1J2 LTR MaLR -34 416 22 294 136 0 0 chr10 97721932 97721976 -42594789 - Alu SINE Alu -10 292 249 1071 65 0 0 chr10 97721976 97722099 -42594666 - AluSq/x SINE Alu -177 136 14 1577 99 63 5 chr10 97722100 97722322 -42594443 - AluSg SINE Alu -75 235 1 2240 111 0 19 chr10 97722647 97722954 -42593811 - AluSx SINE Alu -11 301 1 2111 119 20 3 chr10 97723306 97723601 -42593164 - AluSx SINE Alu -11 301 2 2157 116 6 16 chr10 97723716 97724027 -42592738 - AluSx SINE Alu -4 308 1 742 275 98 65 chr10 97724685 97725082 -42591683 + L2 LINE L2 2854 3263 -50 422 216 29 10 chr10 97725444 97725546 -42591219 - MER5A DNA MER1_type -84 105 2 2146 127 0 0 chr10 97725549 97725866 -42590899 - AluSx SINE Alu 0 317 1 386 200 8 173 chr10 97726414 97726669 -42590096 - L1MC4 LINE L1 -3 8039 7827 688 100 0 0 chr10 97726671 97726761 -42590004 - 5S rRNA rRNA -31 90 1 435 276 15 8 chr10 97726761 97726895 -42589870 - L1MC4 LINE L1 -202 7840 7706 2353 91 0 3 chr10 97727018 97727316 -42589449 - AluSg SINE Alu -11 299 3 246 32 0 0 chr10 97727330 97727361 -42589404 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2227 117 7 0 chr10 97727385 97727684 -42589081 + AluSg SINE Alu 1 301 -9 219 139 0 0 chr10 97728205 97728241 -42588524 + (CA)n Simple_repeat Simple_repeat 1 36 0 346 231 0 44 chr10 97728280 97728328 -42588437 - MER53 DNA DNA -89 100 56 2269 101 0 26 chr10 97728328 97728635 -42588130 - AluSx SINE Alu -13 299 1 346 231 0 44 chr10 97728635 97728677 -42588088 - MER53 DNA DNA -133 56 14 405 0 0 0 chr10 97728696 97728741 -42588024 + (CA)n Simple_repeat Simple_repeat 2 46 0 2661 154 12 2 chr10 97729128 97729550 -42587215 + MSTB LTR MaLR 1 426 0 2367 76 0 13 chr10 97730060 97730362 -42586403 - AluSc SINE Alu -10 299 2 2358 113 0 0 chr10 97730429 97730730 -42586035 + AluSx SINE Alu 1 301 -11 2308 110 0 13 chr10 97731145 97731462 -42585303 - AluSq SINE Alu 0 313 1 2124 131 3 10 chr10 97731863 97732177 -42584588 - AluSx SINE Alu 0 312 1 1776 199 3 0 chr10 97732235 97732542 -42584223 + AluJo SINE Alu 1 308 -4 216 291 163 12 chr10 97732919 97733005 -42583760 + L2 LINE L2 3214 3312 -1 2148 105 3 7 chr10 97733280 97733588 -42583177 - AluSp SINE Alu 0 307 1 25 51 0 0 chr10 97733830 97733869 -42582896 + AT_rich Low_complexity Low_complexity 1 39 0 2404 94 3 3 chr10 97734274 97734583 -42582182 + AluSx SINE Alu 1 309 -3 381 220 53 8 chr10 97734728 97734860 -42581905 - L1MEc LINE L1 -4452 1944 1807 378 201 19 17 chr10 97735437 97735599 -42581166 - MER20 DNA MER1_type 0 219 2 202 287 147 39 chr10 97735602 97735731 -42581034 + MIR3 SINE MIR 53 195 -13 1055 167 254 4 chr10 97735804 97736052 -42580713 + AluJb SINE Alu 1 305 0 23 0 0 0 chr10 97736597 97736620 -42580145 + AT_rich Low_complexity Low_complexity 1 23 0 2313 180 62 0 chr10 97738044 97738495 -42578270 + MER31A LTR ERV1 1 479 -6 207 0 0 0 chr10 97739510 97739533 -42577232 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 477 223 45 0 chr10 97739738 97739850 -42576915 + MIR SINE MIR 104 220 -42 2378 86 0 0 chr10 97740258 97740548 -42576217 + AluSc SINE Alu 1 290 -19 602 214 175 39 chr10 97740571 97740800 -42575965 + L2 LINE L2 3054 3313 0 1168 139 0 0 chr10 97741513 97741678 -42575087 - AluSg/x SINE Alu -14 298 134 2387 97 0 3 chr10 97741678 97741989 -42574776 - AluSg SINE Alu 0 310 1 441 0 0 0 chr10 97742124 97742173 -42574592 + (CA)n Simple_repeat Simple_repeat 2 50 0 366 256 35 35 chr10 97742240 97742412 -42574353 + MIR SINE MIR 67 238 -24 514 187 47 132 chr10 97742875 97743007 -42573758 - L1MEc LINE L1 -5333 1063 958 2102 106 3 10 chr10 97743007 97743299 -42573466 + AluSx SINE Alu 1 290 -22 514 187 47 132 chr10 97743299 97743401 -42573364 - L1MEc LINE L1 -5438 958 849 410 197 124 26 chr10 97743414 97743565 -42573200 - L1MEc LINE L1 -5817 579 358 223 28 56 0 chr10 97743567 97743603 -42573162 + (TC)n Simple_repeat Simple_repeat 1 38 0 246 32 0 0 chr10 97743603 97743634 -42573131 + (TG)n Simple_repeat Simple_repeat 2 32 0 878 247 72 28 chr10 97743635 97743926 -42572839 - L1MEc LINE L1 -6027 369 66 471 236 29 21 chr10 97743963 97744103 -42572662 - MIR SINE MIR -120 142 2 608 232 107 0 chr10 97744373 97744541 -42572224 - L2 LINE L2 0 3313 3128 269 175 18 18 chr10 97744786 97744843 -42571922 - L2 LINE L2 -334 2979 2923 459 251 221 5 chr10 97745318 97745517 -42571248 + MIR SINE MIR 2 243 -19 1825 146 46 0 chr10 97746862 97747143 -42569622 - AluSx SINE Alu -18 294 1 2420 181 110 25 chr10 97747337 97747857 -42568908 + LTR6A LTR ERV1 1 564 0 864 252 107 30 chr10 97747992 97748366 -42568399 + L2 LINE L2 2616 3021 -251 228 204 67 167 chr10 97748414 97748654 -42568111 + L2 LINE L2 3008 3223 -90 2432 89 0 0 chr10 97748838 97749129 -42567636 + AluSx SINE Alu 1 291 -21 1444 175 45 29 chr10 97749187 97749496 -42567269 + MER33 DNA MER1_type 6 319 -5 923 121 0 0 chr10 97749792 97749916 -42566849 - FLAM_C SINE Alu -9 124 1 1874 132 0 42 chr10 97750119 97750237 -42566528 + AluSx SINE Alu 19 140 -172 2315 112 0 0 chr10 97750237 97750542 -42566223 + AluSg SINE Alu 1 305 -5 1874 132 0 42 chr10 97750542 97750711 -42566054 + AluSx SINE Alu 140 294 -18 440 227 91 9 chr10 97750716 97750826 -42565939 + MER94 DNA DNA 13 131 -3 2155 112 42 0 chr10 97751183 97751469 -42565296 + AluSx SINE Alu 1 298 -14 294 224 0 0 chr10 97751982 97752040 -42564725 + MER117 DNA MER1_type 103 160 -37 1882 78 41 22 chr10 97752568 97752838 -42563927 + L1PA3 LINE L1 5879 6153 -2 1284 131 0 26 chr10 97753242 97753296 -42563469 - AluSx SINE Alu -126 186 132 2350 96 0 0 chr10 97753296 97753587 -42563178 - AluSg SINE Alu -19 291 1 1284 131 0 26 chr10 97753587 97753723 -42563042 - AluSx SINE Alu -180 132 1 1419 191 84 4 chr10 97753751 97754024 -42562741 + AluJo SINE Alu 3 297 -15 1557 101 14 0 chr10 97754025 97754232 -42562533 + AluSx SINE Alu 1 210 -102 2114 104 14 0 chr10 97754347 97754634 -42562131 + AluSx SINE Alu 6 296 -16 2330 65 41 0 chr10 97754636 97754930 -42561835 + AluSq SINE Alu 1 306 -7 878 155 88 88 chr10 97756196 97756343 -42560422 - MLT1C LTR MaLR -236 231 82 1963 121 50 0 chr10 97756343 97756623 -42560142 - AluSx SINE Alu -18 294 1 878 155 88 88 chr10 97756623 97756701 -42560064 - MLT1C LTR MaLR -384 83 6 271 307 73 22 chr10 97756815 97756952 -42559813 - LTR16B LTR ERVL -2 462 319 313 182 23 159 chr10 97757087 97757161 -42559604 - LTR16A LTR ERVL -336 114 64 2209 112 3 0 chr10 97757161 97757465 -42559300 - AluSq SINE Alu -8 305 1 313 182 23 159 chr10 97757465 97757522 -42559243 - LTR16A LTR ERVL -386 64 1 209 271 47 65 chr10 97758408 97758515 -42558250 - MIR SINE MIR -34 228 124 222 37 0 0 chr10 97758848 97758875 -42557890 + (TC)n Simple_repeat Simple_repeat 2 28 0 278 281 108 27 chr10 97758884 97759069 -42557696 - HAL1 LINE L1 -6 2501 2302 339 311 236 20 chr10 97759662 97760006 -42556759 - L2 LINE L2 -8 3305 2888 240 277 69 62 chr10 97760278 97760408 -42556357 + MIR SINE MIR 82 212 -50 21 0 0 0 chr10 97760444 97760465 -42556300 + AT_rich Low_complexity Low_complexity 1 21 0 2238 128 0 0 chr10 97760538 97760842 -42555923 - AluSx SINE Alu -8 304 1 2302 113 0 3 chr10 97762538 97762849 -42553916 + AluSg SINE Alu 1 310 0 43895 47 7 1 chr10 97763366 97769485 -42547280 + L1PA4 LINE L1 1 6155 0 1848 159 6 48 chr10 97769973 97770287 -42546478 + AluJb SINE Alu 1 301 -11 587 179 0 0 chr10 97771597 97771720 -42545045 + L1M4 LINE L1 5172 5294 -852 577 274 38 39 chr10 97772771 97773001 -42543764 - MIR SINE MIR -34 228 2 420 219 37 62 chr10 97773087 97773246 -42543519 - L1ME2 LINE L1 -16 6146 5978 1765 170 3 3 chr10 97773253 97773565 -42543200 - AluJo SINE Alu 0 312 1 1211 220 118 26 chr10 97773656 97774006 -42542759 - L1M4 LINE L1 -1388 4758 4355 2116 119 0 0 chr10 97774006 97774300 -42542465 + AluSx SINE Alu 1 294 -18 1211 220 118 26 chr10 97774300 97774408 -42542357 - L1M4 LINE L1 -1791 4355 4258 398 165 82 0 chr10 97774449 97774534 -42542231 - MER33 DNA MER1_type 0 363 272 1657 156 6 51 chr10 97774535 97774850 -42541915 + AluJb SINE Alu 11 311 -1 761 175 0 7 chr10 97774877 97775014 -42541751 + AluJb SINE Alu 1 136 -176 1032 151 78 50 chr10 97775022 97775264 -42541501 - MER33 DNA MER1_type -87 237 1 377 247 57 57 chr10 97775264 97775563 -42541202 - L1ME LINE L1 -4889 1534 1281 717 246 34 0 chr10 97775655 97775830 -42540935 - L1ME LINE L1 -5884 1047 867 233 148 37 19 chr10 97775847 97775901 -42540864 + T-rich Low_complexity Low_complexity 3 57 0 2303 93 3 0 chr10 97776270 97776582 -42540183 - AluSp SINE Alu 0 313 1 250 329 161 22 chr10 97776959 97777096 -42539669 - L2 LINE L2 -5 3267 3112 37075 95 10 12 chr10 97777376 97779576 -42537189 + L1PA7 LINE L1 13 2216 -3938 1985 103 32 0 chr10 97779576 97779857 -42536908 + AluY SINE Alu 1 290 -21 37075 95 10 12 chr10 97779857 97783812 -42532953 + L1PA7 LINE L1 2216 6154 0 2164 83 7 7 chr10 97784030 97784331 -42532434 - AluSq SINE Alu -12 301 1 374 271 115 37 chr10 97784492 97784736 -42532029 - MER102b DNA MER1_type -24 317 55 247 207 0 17 chr10 97785031 97785089 -42531676 - MIR3 SINE MIR -1 207 151 361 261 87 80 chr10 97785120 97785258 -42531507 + MER5A DNA MER1_type 51 189 0 318 240 60 0 chr10 97785260 97785360 -42531405 - MIR SINE MIR -63 145 40 211 365 24 0 chr10 97786030 97786115 -42530650 - L2 LINE L2 -9 3263 3177 1333 138 28 104 chr10 97786542 97786747 -42530018 - AluJo SINE Alu -1 311 137 2294 73 3 3 chr10 97786747 97787049 -42529716 - AluYa5 SINE Alu -9 302 1 1333 138 28 104 chr10 97787049 97787161 -42529604 - AluJo SINE Alu -175 137 18 798 150 0 24 chr10 97787549 97787676 -42529089 - FLAM_C SINE Alu -18 125 2 274 290 207 18 chr10 97787725 97787866 -42528899 + MIR SINE MIR 9 168 -63 2029 131 7 0 chr10 97787886 97788184 -42528581 + AluSq SINE Alu 1 300 -13 682 303 52 9 chr10 97788214 97788445 -42528320 - MIR SINE MIR -16 246 6 411 228 7 13 chr10 97789038 97789150 -42527615 - MLT1I LTR MaLR 0 450 319 2190 96 0 29 chr10 97789235 97789547 -42527218 - AluSq SINE Alu -10 303 1 419 194 147 23 chr10 97789557 97789686 -42527079 - MLT1J2 LTR MaLR -272 178 34 226 158 0 0 chr10 97789869 97789907 -42526858 + MER4D LTR ERV1 280 317 -555 * 342 261 92 25 chr10 97789878 97789997 -42526768 + MER34B LTR ERV1 5 131 -434 186 270 0 0 chr10 97789998 97790061 -42526704 + (TGGG)n Simple_repeat Simple_repeat 2 64 0 * 588 244 0 0 chr10 97790054 97790234 -42526531 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 215 265 0 0 chr10 97790234 97790283 -42526482 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 383 205 43 77 chr10 97790395 97790481 -42526284 + MER34C LTR ERV1 320 407 -178 1885 148 21 0 chr10 97790481 97790771 -42525994 - AluJb SINE Alu -14 298 3 383 205 43 77 chr10 97790771 97790909 -42525856 + MER34C LTR ERV1 407 554 -31 2022 103 10 3 chr10 97791420 97791711 -42525054 + AluSp SINE Alu 1 293 -20 359 106 0 0 chr10 97791879 97791953 -42524812 - Alu SINE Alu 0 307 234 262 68 114 0 chr10 97791947 97791991 -42524774 + MADE1 DNA Mariner 31 79 -1 * 409 241 75 15 chr10 97791998 97792131 -42524634 - MLT1F LTR MaLR 0 542 402 346 228 22 169 chr10 97792148 97792198 -42524567 - MLT1F LTR MaLR -385 157 101 2008 97 0 44 chr10 97792198 97792527 -42524238 - AluSp SINE Alu 0 316 1 1911 107 0 0 chr10 97792527 97792797 -42523968 - AluSq SINE Alu -13 300 31 346 228 22 169 chr10 97792797 97792928 -42523837 - MLT1F LTR MaLR -439 103 1 227 362 96 0 chr10 97793079 97793217 -42523548 - MIR SINE MIR -66 142 38 249 219 125 0 chr10 97793436 97793500 -42523265 + L1ME4a LINE L1 5530 5601 -520 213 211 0 0 chr10 97793711 97793749 -42523016 + (CA)n Simple_repeat Simple_repeat 1 38 0 497 251 72 60 chr10 97793859 97794091 -42522674 + L1ME4a LINE L1 5791 6030 -91 2265 92 0 3 chr10 97794091 97794397 -42522368 - AluSg SINE Alu -5 305 1 497 251 72 60 chr10 97794397 97794483 -42522282 + L1ME4a LINE L1 6030 6113 -8 234 261 36 62 chr10 97794592 97794765 -42522000 - MIR SINE MIR -27 235 41 481 269 126 58 chr10 97794949 97795243 -42521522 + MLT1K LTR MaLR 214 527 -61 264 305 0 0 chr10 97795243 97795302 -42521463 + polypyrimidine Low_complexity Low_complexity 1 59 0 540 219 75 53 chr10 97795360 97795517 -42521248 + MIR SINE MIR 101 260 -2 2245 97 7 3 chr10 97795558 97795868 -42520897 + AluSx SINE Alu 2 312 0 312 27 0 0 chr10 97796085 97796122 -42520643 + (TG)n Simple_repeat Simple_repeat 2 38 0 306 0 0 0 chr10 97796413 97796447 -42520318 + (CA)n Simple_repeat Simple_repeat 2 35 0 647 259 169 34 chr10 97796447 97796850 -42519915 - LTR67 LTR ERVL -33 524 62 183 80 0 0 chr10 97796927 97796952 -42519813 + (TG)n Simple_repeat Simple_repeat 1 25 0 258 193 0 0 chr10 97797254 97797311 -42519454 + (TGGA)n Simple_repeat Simple_repeat 4 60 0 208 211 174 64 chr10 97797416 97797525 -42519240 - MIR3 SINE MIR -26 182 62 1167 114 0 0 chr10 97798287 97798454 -42518311 - AluSg/x SINE Alu 0 312 146 1940 90 87 3 chr10 97798590 97798878 -42517887 - AluSx SINE Alu 0 312 1 468 274 9 0 chr10 97798889 97798995 -42517770 - MIR SINE MIR -109 153 47 2152 112 0 0 chr10 97799931 97800226 -42516539 - AluSx SINE Alu -17 295 1 348 309 48 42 chr10 97800241 97800409 -42516356 + L1ME4a LINE L1 5881 6049 -72 228 135 0 0 chr10 97800447 97800484 -42516281 + (A)n Simple_repeat Simple_repeat 1 37 0 267 241 27 71 chr10 97800991 97801103 -42515662 - LTR67 LTR ERVL -14 543 437 189 0 0 0 chr10 97801203 97801224 -42515541 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2048 101 0 4 chr10 97801227 97801504 -42515261 - AluSc SINE Alu -33 276 1 2295 101 0 0 chr10 97801515 97801822 -42514943 - AluSg SINE Alu -3 307 1 3272 158 28 80 chr10 97802246 97802973 -42513792 - LTR8 LTR ERV1 0 691 3 268 287 74 8 chr10 97803100 97803222 -42513543 + MER91A DNA MER1_type 22 151 -45 228 167 0 0 chr10 97803887 97803935 -42512830 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 1458 140 98 11 chr10 97804027 97804445 -42512320 + AluSx SINE Alu 14 312 0 1241 134 27 45 chr10 97804952 97805175 -42511590 - MER20 DNA MER1_type 0 219 1 344 215 0 15 chr10 97805178 97805243 -42511522 + MIR SINE MIR 12 75 -187 320 191 29 0 chr10 97805278 97805346 -42511419 + MER94 DNA DNA 2 71 -63 1646 168 7 4 chr10 97805358 97805661 -42511104 + AluJo SINE Alu 2 305 0 662 216 15 17 chr10 97805753 97805914 -42510851 - MIR SINE MIR -36 172 64 1614 183 117 92 chr10 97805956 97806218 -42510547 + MER119 DNA MER1_type 85 339 -244 1455 184 17 34 chr10 97806218 97806511 -42510254 - AluJo SINE Alu -24 288 1 1614 183 117 92 chr10 97806511 97806552 -42510213 + MER119 DNA MER1_type 339 378 -205 2006 96 3 14 chr10 97806552 97806844 -42509921 + AluSx SINE Alu 24 312 0 1614 183 117 92 chr10 97806844 97807026 -42509739 + MER119 DNA MER1_type 378 583 0 282 182 0 0 chr10 97807166 97807232 -42509533 + CT-rich Low_complexity Low_complexity 1 66 0 1939 123 0 3 chr10 97807563 97807871 -42508894 - AluSx SINE Alu 0 307 1 261 211 78 9 chr10 97808119 97808205 -42508560 + MIR SINE MIR 61 152 -56 413 263 204 0 chr10 97808407 97808559 -42508206 - MIR SINE MIR -10 252 70 336 210 109 42 chr10 97809983 97810102 -42506663 - MIR SINE MIR -48 214 88 213 302 116 31 chr10 97810206 97810335 -42506430 + MIR3 SINE MIR 20 159 -49 27 0 0 65 chr10 97812147 97812170 -42504595 + AT_rich Low_complexity Low_complexity 1 21 -22 2030 127 0 0 chr10 97812170 97812462 -42504303 + AluSx SINE Alu 3 294 -18 27 0 0 65 chr10 97812462 97812484 -42504281 + AT_rich Low_complexity Low_complexity 21 43 0 195 69 0 0 chr10 97812551 97812580 -42504185 + (TC)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr10 97812580 97812603 -42504162 + (CA)n Simple_repeat Simple_repeat 1 23 0 563 293 65 39 chr10 97813199 97813428 -42503337 + MIR SINE MIR 28 262 0 186 133 0 0 chr10 97813674 97813704 -42503061 - L2 LINE L2 -3 3269 3240 318 359 101 25 chr10 97814444 97814762 -42502003 - L2 LINE L2 -6 3266 2925 202 299 138 24 chr10 97815141 97815308 -42501457 - L2 LINE L2 -975 2339 2154 298 224 129 34 chr10 97816306 97816453 -42500312 - L1ME4a LINE L1 -2 6119 5959 202 204 0 0 chr10 97816462 97816506 -42500259 + (TG)n Simple_repeat Simple_repeat 2 45 0 2183 80 0 38 chr10 97816998 97817311 -42499454 + AluSc SINE Alu 1 301 -8 203 154 0 26 chr10 97817421 97817460 -42499305 + L2 LINE L2 3276 3313 0 250 268 28 0 chr10 97818100 97818171 -42498594 + MIR3 SINE MIR 108 180 -28 202 259 111 37 chr10 97818668 97818749 -42498016 - L3 LINE CR1 -2 1575 1489 291 224 75 0 chr10 97819057 97819164 -42497601 - L1ME4a LINE L1 -202 5919 5805 504 224 160 19 chr10 97819249 97819405 -42497360 - L1ME3A LINE L1 0 6170 5993 182 352 14 0 chr10 97819951 97820022 -42496743 + MIR SINE MIR 190 261 -1 216 271 0 0 chr10 97820071 97820119 -42496646 - L2 LINE L2 -4 3309 3262 701 156 18 0 chr10 97820140 97820249 -42496516 - MIR SINE MIR -124 138 28 191 297 90 48 chr10 97820251 97820396 -42496369 - L2 LINE L2 0 3272 3122 2174 108 3 0 chr10 97820526 97820833 -42495932 + AluSq SINE Alu 1 308 -5 687 258 35 15 chr10 97820893 97821091 -42495674 + MIR SINE MIR 48 249 -13 1141 245 181 18 chr10 97821676 97822113 -42494652 + L2 LINE L2 2804 3311 -2 376 283 75 9 chr10 97822168 97822274 -42494491 + MIR SINE MIR 16 128 -80 450 189 56 0 chr10 97822884 97822974 -42493791 + MER103 DNA DNA 19 113 -53 396 278 87 0 chr10 97823469 97823584 -42493181 + L2 LINE L2 3189 3313 0 268 268 71 45 chr10 97824079 97824191 -42492574 - MER5A DNA MER1_type -13 176 62 * 273 272 53 26 chr10 97824092 97824206 -42492559 + MER5A DNA MER1_type 40 156 -33 248 278 113 26 chr10 97824299 97824414 -42492351 + MIR SINE MIR 73 197 -65 2309 92 3 0 chr10 97824654 97824958 -42491807 + AluSp SINE Alu 1 305 -8 2185 150 16 13 chr10 97825113 97825486 -42491279 - THE1C LTR MaLR 0 375 2 2296 55 0 45 chr10 97825512 97825823 -42490942 + AluY SINE Alu 1 297 -14 833 272 43 0 chr10 97826015 97826250 -42490515 + MIR SINE MIR 7 251 -11 549 262 32 37 chr10 97826762 97826949 -42489816 + MIR SINE MIR 63 248 -14 1990 120 3 7 chr10 97827099 97827399 -42489366 - AluSx SINE Alu -13 299 1 2359 101 20 76 chr10 97828464 97828861 -42487904 + THE1C LTR MaLR 1 375 0 238 247 13 26 chr10 97828982 97829059 -42487706 + L1MC/D LINE L1 5813 5888 -1920 2143 102 0 16 chr10 97830195 97830500 -42486265 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr10 97830557 97830580 -42486185 + AT_rich Low_complexity Low_complexity 1 23 0 435 259 42 42 chr10 97830916 97831082 -42485683 - L2 LINE L2 -7 3306 3141 855 171 0 7 chr10 97831091 97831243 -42485522 - FRAM SINE Alu -27 149 1 210 312 151 37 chr10 97831243 97831461 -42485304 - L2 LINE L2 -143 3170 2928 1199 266 147 37 chr10 97831565 97832233 -42484532 - L2 LINE L2 -470 2844 2104 252 222 0 0 chr10 97832254 97832299 -42484466 + L2 LINE L2 3258 3302 -11 3294 153 32 44 chr10 97832480 97833099 -42483666 - LTR9 LTR ERV1 0 612 1 321 324 40 29 chr10 97833375 97833548 -42483217 - MIR SINE MIR -65 197 23 341 237 85 42 chr10 97834928 97835046 -42481719 + MIR SINE MIR 28 150 -112 2009 132 0 0 chr10 97835220 97835509 -42481256 - AluSx SINE Alu -23 289 1 1601 184 13 7 chr10 97837249 97837558 -42479207 + AluJo SINE Alu 1 311 -1 733 300 47 4 chr10 97837675 97837908 -42478857 - MIR SINE MIR -19 243 1 591 289 5 36 chr10 97839429 97839623 -42477142 - MER5A DNA MER1_type 0 189 2 568 272 54 7 chr10 97839763 97839910 -42476855 - MIR SINE MIR -4 258 105 400 268 43 36 chr10 97840456 97840594 -42476171 + MIR3 SINE MIR 69 207 -1 841 286 52 12 chr10 97840622 97840870 -42475895 - MIR SINE MIR -1 261 4 1857 144 7 0 chr10 97841360 97841659 -42475106 + AluJo SINE Alu 3 303 -9 32 0 0 0 chr10 97841659 97841691 -42475074 + AT_rich Low_complexity Low_complexity 1 32 0 315 289 106 0 chr10 97841912 97842016 -42474749 + MIR SINE MIR 30 144 -64 21 57 0 0 chr10 97843227 97843262 -42473503 + GC_rich Low_complexity Low_complexity 1 35 0 252 122 0 0 chr10 97843491 97843532 -42473233 + (CACCC)n Simple_repeat Simple_repeat 4 44 0 442 315 79 6 chr10 97845163 97845341 -42471424 - L3 LINE CR1 -20 1557 1367 274 254 119 8 chr10 97845759 97845877 -42470888 + L1ME4a LINE L1 5991 6121 0 365 270 0 54 chr10 97846461 97846572 -42470193 + MLT1J2 LTR MaLR 339 443 -7 653 193 53 106 chr10 97847601 97847719 -42469046 + MIR SINE MIR 67 171 -91 2248 80 3 0 chr10 97847719 97848008 -42468757 + AluSp SINE Alu 1 290 -23 653 193 53 106 chr10 97848008 97848096 -42468669 + MIR SINE MIR 171 262 0 5445 121 44 14 chr10 97848431 97849671 -42467094 + L1PA16 LINE L1 4899 6165 -1 1392 210 90 29 chr10 97849911 97850254 -42466511 - MLT1A1 LTR MaLR 0 365 2 675 271 167 45 chr10 97850601 97850711 -42466054 - L1ME4a LINE L1 -4 6117 6022 1612 157 14 14 chr10 97850711 97851004 -42465761 - AluJb SINE Alu -19 293 1 675 271 167 45 chr10 97851004 97851139 -42465626 - L1ME4a LINE L1 -99 6022 5905 575 100 0 0 chr10 97851139 97851219 -42465546 - MADE1 DNA Mariner 0 80 1 675 271 167 45 chr10 97851219 97851456 -42465309 - L1ME4a LINE L1 -216 5905 5575 1132 253 100 12 chr10 97851907 97852247 -42464518 - MLT1I LTR MaLR 0 409 40 210 298 0 0 chr10 97852291 97852348 -42464417 + L2 LINE L2 3256 3312 -1 1876 110 65 7 chr10 97852355 97852645 -42464120 + AluSx SINE Alu 1 307 -5 2410 67 0 0 chr10 97852754 97853052 -42463713 + AluY SINE Alu 1 298 -13 1938 98 4 0 chr10 97853639 97853904 -42462861 + AluSx SINE Alu 44 309 -3 507 133 0 51 chr10 97855891 97855989 -42460776 + MER53 DNA DNA 3 95 -94 444 125 0 62 chr10 97855905 97856001 -42460764 - MER53 DNA DNA -7 182 93 * 281 320 47 0 chr10 97856493 97856643 -42460122 - L1ME4a LINE L1 -2 6119 5963 1776 155 3 0 chr10 97857547 97857838 -42458927 + AluJb SINE Alu 1 292 -20 2109 117 7 0 chr10 97857912 97858219 -42458546 - AluSx SINE Alu -3 309 1 387 121 0 30 chr10 97858221 97858287 -42458478 - MER5B DNA MER1_type -114 64 1 237 258 54 65 chr10 97858321 97858414 -42458351 - MIR3 SINE MIR 0 208 117 198 284 0 30 chr10 97858684 97858751 -42458014 - MIR SINE MIR -99 109 45 193 188 0 0 chr10 97859043 97859075 -42457690 + L2 LINE L2 3263 3294 -19 1982 96 4 0 chr10 97859190 97859461 -42457304 - AluSg SINE Alu -10 300 29 2010 149 0 0 chr10 97860029 97860331 -42456434 + AluSq SINE Alu 1 302 -11 631 277 60 44 chr10 97860790 97861039 -42455726 - MIR SINE MIR -8 254 2 306 349 110 42 chr10 97861854 97861957 -42454808 + L1MC4a LINE L1 5455 5550 -2258 2223 105 3 0 chr10 97861957 97862263 -42454502 - AluSq SINE Alu -6 307 1 306 349 110 42 chr10 97862263 97862560 -42454205 + L1MC4a LINE L1 5550 5882 -1926 299 246 44 44 chr10 97863774 97863888 -42452877 + MIR SINE MIR 125 238 -24 245 128 154 77 chr10 97863978 97864056 -42452709 + MIR3 SINE MIR 110 193 -15 4750 169 59 35 chr10 97864831 97866444 -42450321 - L1MC2 LINE L1 0 6344 4696 259 259 59 80 chr10 97866448 97866611 -42450154 + MIR SINE MIR 95 252 -10 1798 130 40 3 chr10 97866775 97867075 -42449690 - AluSx SINE Alu -1 311 1 921 245 197 58 chr10 97867206 97867745 -42449020 - MLT1L LTR MaLR 0 615 2 450 276 141 18 chr10 97867811 97867981 -42448784 - MIR SINE MIR -17 245 55 262 274 89 55 chr10 97868288 97868423 -42448342 + MIR3 SINE MIR 16 155 -53 266 318 56 37 chr10 97868423 97868530 -42448235 + MER5B DNA MER1_type 1 109 -69 209 298 18 53 chr10 97868537 97868594 -42448171 + L2 LINE L2 3134 3188 -84 227 264 69 0 chr10 97868626 97868698 -42448067 + MIR3 SINE MIR 113 189 -19 2325 80 13 0 chr10 97869518 97869820 -42446945 + AluSx SINE Alu 1 306 -6 349 240 0 0 chr10 97870585 97870660 -42446105 - MER63 DNA MER1_type -85 751 677 281 246 88 70 chr10 97870737 97870840 -42445925 + MIR3 SINE MIR 92 199 -9 2100 131 0 0 chr10 97870840 97871153 -42445612 + AluSq SINE Alu 1 313 0 1989 111 5 134 chr10 97872098 97872485 -42444280 - MER1B DNA MER1_type 0 337 1 191 302 0 0 chr10 97872498 97872551 -42444214 + L2 LINE L2 3261 3313 0 823 296 44 11 chr10 97873775 97874137 -42442628 + LTR16B LTR ERVL 1 374 -90 2257 180 28 37 chr10 97874395 97874905 -42441860 - MLT1D LTR MaLR 0 505 1 255 210 32 16 chr10 97875659 97875721 -42441044 + MER5B DNA MER1_type 4 66 -112 2357 119 0 0 chr10 97875721 97876032 -42440733 + AluSx SINE Alu 1 311 -1 204 88 0 29 chr10 97876053 97876087 -42440678 - MER5C DNA MER1_type -290 34 2 308 344 66 16 chr10 97876100 97876222 -42440543 + L2 LINE L2 3136 3263 -9 285 258 67 0 chr10 97876252 97876372 -42440393 - LTR33A LTR ERVL -8 515 388 2204 90 38 0 chr10 97876562 97876850 -42439915 - AluSq SINE Alu -14 299 1 751 223 20 56 chr10 97876882 97877133 -42439632 + L1MD2 LINE L1 6010 6251 -108 446 198 8 33 chr10 97877138 97877259 -42439506 + L1MD2 LINE L1 6227 6344 -15 201 217 0 33 chr10 97877695 97877755 -42439010 + CT-rich Low_complexity Low_complexity 2 59 0 351 0 0 0 chr10 97878906 97878945 -42437820 + (TG)n Simple_repeat Simple_repeat 2 40 0 681 177 0 0 chr10 97879300 97879430 -42437335 - FRAM SINE Alu -7 169 40 307 308 29 10 chr10 97880061 97880315 -42436450 - L1MDb LINE L1 -5091 979 717 442 256 74 0 chr10 97882050 97882171 -42434594 - L2 LINE L2 0 3272 3143 272 278 167 0 chr10 97882361 97882494 -42434271 + MIR SINE MIR 91 249 -13 1585 149 25 67 chr10 97883887 97884202 -42432563 + AluSx SINE Alu 1 302 -10 547 285 30 18 chr10 97884456 97884621 -42432144 + MIR SINE MIR 96 262 0 2097 136 0 0 chr10 97884621 97884922 -42431843 + AluSg SINE Alu 2 302 -8 416 290 35 75 chr10 97885104 97885304 -42431461 + MIR SINE MIR 34 225 -37 299 227 171 97 chr10 97885574 97885750 -42431015 - MIR SINE MIR -17 245 57 1794 167 10 7 chr10 97885940 97886228 -42430537 - AluJb SINE Alu -23 289 1 1758 226 95 30 chr10 97886241 97886812 -42429953 - L1MC4 LINE L1 -140 7902 7295 1721 182 9 0 chr10 97886962 97887297 -42429468 - L1MA4 LINE L1 -11 6289 5952 486 51 0 88 chr10 97887319 97887456 -42429309 + (TA)n Simple_repeat Simple_repeat 2 126 0 1201 137 24 0 chr10 97887458 97887669 -42429096 + L1MA4 LINE L1 5776 5991 -309 2485 129 49 7 chr10 97888995 97889406 -42427359 - MSTA LTR MaLR 0 428 1 331 225 39 129 chr10 97890143 97890321 -42426444 + MER5A DNA MER1_type 3 164 -25 27 0 0 0 chr10 97891041 97891068 -42425697 + AT_rich Low_complexity Low_complexity 1 27 0 277 285 33 26 chr10 97891881 97892032 -42424733 - HAL1b LINE L1 -7 1341 1190 323 197 53 105 chr10 97892098 97892147 -42424618 - L1MA10 LINE L1 -2 6332 6282 2246 121 0 0 chr10 97892147 97892444 -42424321 - AluSx SINE Alu -15 297 1 323 197 53 105 chr10 97892444 97892457 -42424308 - L1MA10 LINE L1 -52 6282 5974 676 217 21 140 chr10 97892457 97892796 -42423969 - L1ME1 LINE L1 -46 6120 5829 1708 192 0 3 chr10 97892796 97893087 -42423678 - AluJo SINE Alu -22 290 1 676 217 21 140 chr10 97893087 97893125 -42423640 - L1ME1 LINE L1 -337 5829 5788 * 839 236 97 42 chr10 97893122 97893524 -42423241 - HAL1b LINE L1 -228 1120 697 263 194 19 93 chr10 97893528 97893636 -42423129 - L1ME1 LINE L1 -1480 4666 4567 1871 124 69 36 chr10 97893818 97894181 -42422584 - THE1C LTR MaLR 0 375 1 303 146 0 0 chr10 97894537 97894592 -42422173 + (TG)n Simple_repeat Simple_repeat 2 56 0 2351 104 0 3 chr10 97895902 97896210 -42420555 + AluSx SINE Alu 3 309 -3 212 218 91 0 chr10 97896680 97896735 -42420030 - L2 LINE L2 0 3313 3254 231 313 111 10 chr10 97896742 97896841 -42419924 - MIR SINE MIR -107 155 47 595 208 275 19 chr10 97896862 97897069 -42419696 + MIR SINE MIR 3 262 0 1425 180 25 32 chr10 97897290 97897649 -42419116 - AluJb SINE Alu 0 357 1 267 140 0 0 chr10 97898150 97898200 -42418565 + (A)n Simple_repeat Simple_repeat 1 50 0 321 68 0 0 chr10 97898496 97898540 -42418225 + (CA)n Simple_repeat Simple_repeat 1 44 0 40 21 0 0 chr10 97899085 97899132 -42417633 + AT_rich Low_complexity Low_complexity 1 47 0 1826 143 4 0 chr10 97899135 97899408 -42417357 - AluSx SINE Alu -38 274 1 2059 105 0 72 chr10 97899691 97900023 -42416742 - AluSc SINE Alu -1 308 1 415 297 86 29 chr10 97900025 97900428 -42416337 - L1ME3A LINE L1 -225 5945 5518 2018 148 10 6 chr10 97900428 97900739 -42416026 + AluJo SINE Alu 1 312 0 216 97 0 0 chr10 97900744 97900775 -42415990 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 832 169 0 0 chr10 97901024 97901148 -42415617 - FLAM_C SINE Alu -19 124 1 204 40 0 0 chr10 97901204 97901229 -42415536 + (TC)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr10 97901924 97901946 -42414819 + AT_rich Low_complexity Low_complexity 1 22 0 2696 87 5 14 chr10 97901978 97902345 -42414420 - THE1B LTR MaLR 0 364 1 1313 204 84 48 chr10 97902682 97903124 -42413641 - MER39 LTR ERV1 0 707 250 181 340 10 30 chr10 97903788 97903888 -42412877 + L2 LINE L2 157 254 -3060 2317 103 3 0 chr10 97904720 97905022 -42411743 + AluSc SINE Alu 1 303 -6 323 276 63 31 chr10 97906036 97906163 -42410602 + MIR3 SINE MIR 30 160 -48 195 331 66 40 chr10 97906853 97907004 -42409761 - L2 LINE L2 -313 2959 2805 2159 134 0 19 chr10 97907393 97907706 -42409059 - AluSx SINE Alu -5 307 1 24 0 0 0 chr10 97908175 97908199 -42408566 + AT_rich Low_complexity Low_complexity 1 24 0 2474 111 10 28 chr10 97908242 97908639 -42408126 - MLT1B LTR MaLR 0 390 1 551 180 55 55 chr10 97909474 97909602 -42407163 + L2 LINE L2 3182 3309 -4 239 313 103 37 chr10 97909662 97909876 -42406889 + MARNA DNA Mariner 69 296 -290 21 0 0 0 chr10 97910139 97910160 -42406605 + AT_rich Low_complexity Low_complexity 1 21 0 305 233 0 0 chr10 97910566 97910626 -42406139 + L2 LINE L2 3254 3313 0 2375 104 8 14 chr10 97911065 97911420 -42405345 - THE1A LTR MaLR -2 353 1 704 189 0 8 chr10 97911825 97911957 -42404808 + FLAM_C SINE Alu 1 131 -2 217 353 69 10 chr10 97912992 97913094 -42403671 + L3 LINE CR1 1380 1487 -90 22 0 0 0 chr10 97913825 97913847 -42402918 + AT_rich Low_complexity Low_complexity 1 22 0 466 211 186 61 chr10 97913904 97914216 -42402549 + L1MC4a LINE L1 5509 5859 -1949 267 224 0 0 chr10 97915306 97915355 -42401410 + L3 LINE CR1 1520 1568 -9 1131 271 110 68 chr10 97915537 97916083 -42400682 - L3 LINE CR1 -5 1572 1004 413 259 101 14 chr10 97916245 97916384 -42400381 - MIR SINE MIR 0 262 112 369 293 49 19 chr10 97916490 97916628 -42400137 + MIR SINE MIR 16 144 -64 26 0 0 0 chr10 97916671 97916697 -42400068 + AT_rich Low_complexity Low_complexity 1 26 0 254 270 169 11 chr10 97916723 97916812 -42399953 + MIR SINE MIR 110 212 -50 21 57 0 0 chr10 97917897 97917932 -42398833 + AT_rich Low_complexity Low_complexity 1 35 0 2099 134 0 0 chr10 97917962 97918260 -42398505 + AluSg SINE Alu 1 298 -12 566 342 60 0 chr10 97920010 97920244 -42396521 + L3 LINE CR1 1231 1478 -99 275 256 171 0 chr10 97920303 97920385 -42396380 - MER5A DNA MER1_type -90 99 4 331 327 65 72 chr10 97920464 97920742 -42396023 - L2 LINE L2 0 3272 2997 269 272 52 89 chr10 97920942 97921086 -42395679 - L2 LINE L2 -1096 2218 2081 1499 174 6 73 chr10 97921086 97921403 -42395362 + AluJo SINE Alu 1 296 -16 269 272 52 89 chr10 97921403 97921449 -42395316 - L2 LINE L2 -1233 2081 2035 454 324 170 46 chr10 97921788 97922566 -42394199 - L2 LINE L2 -20 3252 2362 327 273 87 0 chr10 97923294 97923441 -42393324 - MIR SINE MIR -27 235 76 274 286 89 65 chr10 97923606 97923774 -42392991 - MIR SINE MIR -38 224 53 1813 182 0 19 chr10 97925056 97925374 -42391391 + AluJo SINE Alu 1 312 0 28 48 0 0 chr10 97925383 97925425 -42391340 + AT_rich Low_complexity Low_complexity 1 42 0 582 271 127 6 chr10 97925634 97925815 -42390950 - MIR SINE MIR -34 228 26 2201 107 7 0 chr10 97925894 97926185 -42390580 - AluSq SINE Alu -17 296 4 201 108 0 0 chr10 97928218 97928255 -42388510 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 719 284 29 58 chr10 97930296 97930531 -42386234 + MIR SINE MIR 3 232 -30 4177 136 25 0 chr10 97930531 97931213 -42385552 + L1MC1 LINE L1 5622 6320 -13 626 165 0 35 chr10 97931234 97931349 -42385416 + AluJb SINE Alu 190 300 -12 408 269 91 38 chr10 97931391 97931577 -42385188 + MIR SINE MIR 32 227 -35 1226 155 17 0 chr10 97931615 97931796 -42384969 - AluJo SINE Alu -127 185 2 195 233 133 60 chr10 97932090 97932240 -42384525 - L2 LINE L2 0 3313 3153 185 361 0 0 chr10 97932293 97932354 -42384411 + L2 LINE L2 2113 2173 -1141 420 159 9 75 chr10 97932418 97932525 -42384240 + MLT1J LTR MaLR 412 511 0 23 33 0 0 chr10 97932980 97933010 -42383755 + AT_rich Low_complexity Low_complexity 1 30 0 1808 170 24 3 chr10 97933726 97934014 -42382751 - AluJo SINE Alu -18 294 1 23 0 0 0 chr10 97935345 97935368 -42381397 + AT_rich Low_complexity Low_complexity 1 23 0 646 90 64 0 chr10 97935915 97936024 -42380741 + L1M4 LINE L1 5678 5793 -369 660 127 0 47 chr10 97936024 97936241 -42380524 + (TA)n Simple_repeat Simple_repeat 1 206 0 2699 73 3 14 chr10 97936252 97936622 -42380143 + L1PB2 LINE L1 5784 6149 -2 2323 103 0 0 chr10 97936971 97937281 -42379484 + AluSg SINE Alu 1 310 0 33 0 0 0 chr10 97937925 97937958 -42378807 + AT_rich Low_complexity Low_complexity 1 33 0 313 301 19 39 chr10 97938282 97938385 -42378380 + MIR SINE MIR 19 119 -89 1052 171 17 0 chr10 97938386 97938567 -42378198 - MER58A DNA MER1_type -2 222 39 1936 151 55 117 chr10 97938571 97938954 -42377811 + L1MDa LINE L1 19 365 -6175 4690 88 22 1 chr10 97938954 97939638 -42377127 + L1PA8A LINE L1 5455 6151 0 1936 151 55 117 chr10 97939638 97939780 -42376985 + L1MDa LINE L1 365 514 -6026 328 290 29 87 chr10 97941149 97941287 -42375478 + MIR SINE MIR 20 149 -113 749 109 40 244 chr10 97941352 97941627 -42375138 - MER30 DNA MER1_type -8 222 4 196 310 228 0 chr10 97942977 97943135 -42373630 - MIR SINE MIR 0 262 69 1292 173 31 31 chr10 97943385 97943645 -42373120 - AluJb SINE Alu -24 288 29 264 301 123 0 chr10 97943950 97944023 -42372742 + MIR3 SINE MIR 89 170 -38 634 294 52 9 chr10 97944336 97944567 -42372198 + MIR SINE MIR 12 252 -10 246 62 0 0 chr10 97945054 97945086 -42371679 + (CCG)n Simple_repeat Simple_repeat 2 33 0 270 329 0 0 chr10 97945872 97945948 -42370817 + L2 LINE L2 3230 3305 -8 33 25 0 0 chr10 97946301 97946341 -42370424 + AT_rich Low_complexity Low_complexity 1 40 0 315 244 166 53 chr10 97946439 97946598 -42370167 - MIR SINE MIR -62 146 19 227 79 26 0 chr10 97946598 97946636 -42370129 + (TC)n Simple_repeat Simple_repeat 1 39 0 318 291 76 41 chr10 97946890 97947062 -42369703 - L2 LINE L2 -13 3300 3123 2099 107 10 7 chr10 97947246 97947536 -42369229 - AluSx SINE Alu -17 295 5 2159 116 26 0 chr10 97947551 97947853 -42368912 - AluSx SINE Alu -2 310 1 291 282 170 3 chr10 97947902 97948055 -42368710 + MLT1G LTR MaLR 52 225 -370 487 291 28 7 chr10 97948077 97948218 -42368547 + MLT1G1 LTR MaLR 451 594 -1 692 314 104 48 chr10 97948261 97948637 -42368128 + L2 LINE L2 2875 3271 -1 286 301 21 21 chr10 97948637 97948730 -42368035 - MIR SINE MIR -100 162 70 2368 125 97 5 chr10 97948784 97949175 -42367590 + MSTA LTR MaLR 1 427 -1 240 163 0 0 chr10 97949178 97949221 -42367544 + (TA)n Simple_repeat Simple_repeat 1 43 0 1505 159 21 25 chr10 97949237 97949520 -42367245 - AluJo SINE Alu -30 282 1 348 24 0 0 chr10 97949714 97949755 -42367010 + (GGAGA)n Simple_repeat Simple_repeat 2 42 0 760 222 63 63 chr10 97949996 97950217 -42366548 + MIR SINE MIR 32 252 -10 516 237 110 46 chr10 97950741 97950914 -42365851 + MIR SINE MIR 66 249 -13 2447 225 68 64 chr10 97951023 97951372 -42365393 + L1ME3A LINE L1 4891 5237 -933 2050 125 0 14 chr10 97951372 97951669 -42365096 + AluSx SINE Alu 6 298 -14 2447 225 68 64 chr10 97951669 97952326 -42364439 + L1ME3A LINE L1 5237 5954 -216 561 191 8 0 chr10 97952326 97952457 -42364308 + L1MA8 LINE L1 6158 6289 -2 2447 225 68 64 chr10 97952457 97952670 -42364095 + L1ME3A LINE L1 5954 6165 -5 189 289 68 121 chr10 97953521 97953711 -42363054 - L2 LINE L2 -53 3219 3040 307 263 45 53 chr10 97954435 97954568 -42362197 - Charlie8 DNA MER1_type -2275 142 11 2119 196 55 64 chr10 97954874 97955000 -42361765 + MER92B LTR ERV1 1 127 -509 2595 145 51 15 chr10 97955000 97955469 -42361296 + MER66B LTR ERV1 1 486 0 2119 196 55 64 chr10 97955469 97955984 -42360781 + MER92B LTR ERV1 127 636 0 2200 127 0 0 chr10 97956040 97956366 -42360399 + AluSg SINE Alu 1 310 0 580 263 63 24 chr10 97956624 97956829 -42359936 + L2 LINE L2 2174 2386 -928 208 231 96 0 chr10 97956904 97956956 -42359809 - MIR SINE MIR -160 102 46 3168 191 33 45 chr10 97956963 97957111 -42359654 + LTR39 LTR ERV1 35 183 -600 2309 85 3 0 chr10 97957111 97957404 -42359361 + AluSc SINE Alu 1 294 -15 3168 191 33 45 chr10 97957404 97958013 -42358752 + LTR39 LTR ERV1 183 783 0 195 250 159 0 chr10 97958015 97958103 -42358662 + L2 LINE L2 2384 2485 -829 3858 153 49 42 chr10 97958263 97958668 -42358097 - L1MB4 LINE L1 -6 6174 5773 1821 153 3 27 chr10 97958668 97958968 -42357797 - AluJo SINE Alu -19 293 1 3858 153 49 42 chr10 97958968 97959017 -42357748 - L1MB4 LINE L1 -407 5773 5726 2266 130 97 8 chr10 97959017 97959410 -42357355 - MSTA LTR MaLR 0 428 1 3858 153 49 42 chr10 97959410 97959853 -42356912 - L1MB4 LINE L1 -454 5726 5270 1558 221 22 25 chr10 97959853 97960219 -42356546 - MLT1A1 LTR MaLR 0 365 1 1619 129 87 0 chr10 97960219 97960505 -42356260 - MLT1A1-int LTR MaLR 0 1735 1425 614 131 0 0 chr10 97960508 97960592 -42356173 + AluSg/x SINE Alu 188 271 -41 320 139 93 23 chr10 97960592 97960678 -42356087 - LTR36 LTR ERV1 -517 94 3 440 198 0 0 chr10 97960682 97960763 -42356002 - MLT1A1 LTR MaLR -284 81 1 443 218 38 8 chr10 97960763 97960896 -42355869 - L1MB4 LINE L1 -872 5274 5138 1598 182 54 0 chr10 97960906 97961186 -42355579 - AluJo SINE Alu -17 295 1 1266 191 43 3 chr10 97961201 97961504 -42355261 - LTR37A LTR ERV1 -27 399 85 415 296 74 68 chr10 97961749 97962073 -42354692 - L2 LINE L2 -3 3269 2944 265 333 58 32 chr10 97962929 97963085 -42353680 + MER5A DNA MER1_type 7 166 -23 499 251 107 78 chr10 97963095 97963338 -42353427 + MIR SINE MIR 13 262 0 712 177 72 33 chr10 97963776 97963957 -42352808 + MER5A DNA MER1_type 1 188 -1 445 221 0 0 chr10 97964478 97964555 -42352210 + AluJb SINE Alu 3 79 -233 2151 112 0 31 chr10 97964562 97964884 -42351881 - AluSq SINE Alu -1 312 1 1559 124 52 0 chr10 97964884 97965117 -42351648 + AluJb SINE Alu 67 311 -1 384 240 60 67 chr10 97965540 97965690 -42351075 - MIR3 SINE MIR -39 169 21 4135 173 12 22 chr10 97965731 97966594 -42350171 + L1MA9 LINE L1 5421 6274 -38 192 77 0 0 chr10 97966597 97966623 -42350142 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr10 97967509 97967530 -42349235 + (TC)n Simple_repeat Simple_repeat 2 22 0 342 344 50 0 chr10 97969082 97969242 -42347523 + MIR SINE MIR 84 251 -11 280 373 18 0 chr10 97969605 97969715 -42347050 + L2 LINE L2 3153 3264 -8 2194 122 33 33 chr10 97969848 97970210 -42346555 + THE1B LTR MaLR 1 362 -2 237 185 0 0 chr10 97970569 97970634 -42346131 + CT-rich Low_complexity Low_complexity 2 66 0 2461 143 26 9 chr10 97971382 97971803 -42344962 + MSTA LTR MaLR 1 428 0 300 276 29 29 chr10 97971980 97972085 -42344680 - MER5B DNA MER1_type 0 178 74 474 216 29 10 chr10 97972720 97972822 -42343943 + MIR SINE MIR 58 161 -101 1043 235 128 30 chr10 97972825 97973230 -42343535 + MLT1J2 LTR MaLR 6 450 0 4613 141 31 24 chr10 97973995 97974813 -42341952 - Tigger2 DNA MER2_type 0 2718 1896 2101 143 14 26 chr10 97974806 97974860 -42341905 - Tigger2 DNA MER2_type -1524 1194 1141 * 1838 156 7 33 chr10 97974860 97975167 -42341598 - AluSx SINE Alu -13 299 1 2101 143 14 26 chr10 97975167 97975461 -42341304 - Tigger2 DNA MER2_type -1577 1141 850 16024 184 31 27 chr10 97975463 97977079 -42339686 + L1MA4 LINE L1 5 1614 -4868 571 189 34 7 chr10 97977079 97977227 -42339538 + L1MB4 LINE L1 6027 6178 -2 16024 184 31 27 chr10 97977227 97981042 -42335723 + L1MA4 LINE L1 1614 5488 -994 216 0 0 0 chr10 97981042 97981066 -42335699 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 16024 184 31 27 chr10 97981066 97982054 -42334711 + L1MA4 LINE L1 5488 6471 -11 3251 155 13 15 chr10 97982054 97982590 -42334175 - Tigger2 DNA MER2_type -1854 864 330 1114 154 0 6 chr10 97982600 97982769 -42333996 - AluJo SINE Alu -18 294 127 921 133 0 0 chr10 97982770 97982913 -42333852 - Tigger2 DNA MER2_type -2404 314 172 6944 100 57 11 chr10 97982918 97983910 -42332855 + MER84-int LTR ERV1 3918 4954 0 3444 103 45 4 chr10 97983910 97984397 -42332368 + MER84 LTR ERV1 1 507 0 1768 159 58 73 chr10 97984443 97984677 -42332088 - MLT1B LTR MaLR 0 390 163 1835 151 10 10 chr10 97984677 97984989 -42331776 - AluJb SINE Alu 0 312 1 1768 159 58 73 chr10 97984989 97985150 -42331615 - MLT1B LTR MaLR -227 163 1 295 283 179 33 chr10 97985150 97985334 -42331431 - MIR SINE MIR -11 251 41 1645 167 15 4 chr10 97985427 97985691 -42331074 + Tigger7 DNA MER2_type 1 267 -466 973 136 26 0 chr10 97985705 97985860 -42330905 + FAM SINE Alu 1 43 -6 356 164 33 0 chr10 97986100 97986161 -42330604 + Tigger7 DNA MER2_type 2493 2555 -32 213 179 71 18 chr10 97986488 97986544 -42330221 - L2 LINE L2 -16 3297 3239 338 335 68 16 chr10 97986677 97986868 -42329897 + MIR SINE MIR 47 247 -15 252 231 208 62 chr10 97987222 97987268 -42329497 + L2 LINE L2 3164 3202 -111 302 91 18 0 chr10 97987268 97987323 -42329442 + (TTTTG)n Simple_repeat Simple_repeat 1 56 0 2043 104 4 14 chr10 97987327 97987606 -42329159 - AluSq SINE Alu -37 276 1 252 231 208 62 chr10 97987606 97987684 -42329081 + L2 LINE L2 3204 3312 -1 2698 69 26 51 chr10 97988300 97988691 -42328074 - L1PA10 LINE L1 -4 6164 5784 343 227 13 0 chr10 97988691 97988766 -42327999 - MIR SINE MIR -133 129 54 2225 104 10 0 chr10 97988919 97989217 -42327548 - AluSx SINE Alu -11 301 1 1424 98 0 80 chr10 97990009 97990233 -42326532 + AluSg/x SINE Alu 80 285 -25 243 0 0 0 chr10 97990236 97990263 -42326502 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2587 71 0 0 chr10 97990675 97990985 -42325780 - AluY SINE Alu -1 310 1 283 241 0 0 chr10 97991156 97991214 -42325551 - MIR SINE MIR -70 138 81 222 351 127 15 chr10 97991841 97991975 -42324790 - MIR3 SINE MIR -30 178 30 620 284 96 4 chr10 97992169 97992398 -42324367 + MIR SINE MIR 13 262 0 4209 97 45 10 chr10 97992811 97993411 -42323354 - L1MA5A LINE L1 0 6297 5677 2394 149 26 37 chr10 97993658 97994113 -42322652 + MER74A LTR ERVL 4 453 -105 618 189 106 8 chr10 97994137 97994269 -42322496 + MER5B DNA MER1_type 28 172 -6 828 262 15 52 chr10 97994663 97994934 -42321831 + MIR SINE MIR 2 262 0 308 296 16 24 chr10 97995464 97995589 -42321176 + LTR67 LTR ERVL 434 557 0 349 303 62 14 chr10 97995683 97995828 -42320937 - MIR SINE MIR -55 207 56 237 178 0 0 chr10 97995944 97995989 -42320776 + T-rich Low_complexity Low_complexity 1 45 0 203 171 0 0 chr10 97997168 97997203 -42319562 + (ATG)n Simple_repeat Simple_repeat 2 36 0 574 277 30 18 chr10 97997217 97997383 -42319382 - MIR SINE MIR -31 231 64 307 209 30 15 chr10 97998258 97998325 -42318440 + MIR3 SINE MIR 109 176 -32 309 319 87 30 chr10 97998743 97999116 -42317649 + L2 LINE L2 2692 3246 -26 183 80 0 0 chr10 98000274 98000299 -42316466 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 205 175 32 16 chr10 98001232 98001295 -42315470 + (TTTG)n Simple_repeat Simple_repeat 2 65 0 356 323 26 45 chr10 98002356 98002511 -42314254 + MIR3 SINE MIR 21 172 -36 285 169 0 17 chr10 98005322 98005381 -42311384 - L1PA15 LINE L1 -9 6156 6099 284 266 147 38 chr10 98005397 98005581 -42311184 + L2 LINE L2 2375 2578 -736 330 45 0 0 chr10 98005813 98005857 -42310908 + (CA)n Simple_repeat Simple_repeat 2 45 0 752 151 0 0 chr10 98006810 98006916 -42309849 - FLAM_C SINE Alu -24 119 14 603 301 96 9 chr10 98007104 98007342 -42309423 + MIR SINE MIR 1 262 0 295 301 0 78 chr10 98007654 98007757 -42309008 + MIR3 SINE MIR 10 104 -104 286 228 94 87 chr10 98007926 98008075 -42308690 - Charlie8 DNA MER1_type -2153 264 115 2581 52 0 0 chr10 98008232 98008537 -42308228 + AluY SINE Alu 1 305 -6 246 211 42 14 chr10 98008888 98008959 -42307806 - MARNA DNA Mariner -113 473 401 * 371 193 45 11 chr10 98008903 98008991 -42307774 + MARNA DNA Mariner 127 217 -369 2546 20 0 10 chr10 98009056 98009350 -42307415 - AluY SINE Alu -20 291 1 445 290 82 0 chr10 98009372 98009528 -42307237 - MIR SINE MIR -62 146 16 556 316 90 4 chr10 98009544 98009778 -42306987 + MARNA DNA Mariner 289 542 -44 300 236 106 32 chr10 98009898 98010021 -42306744 - MER103 DNA DNA 0 166 35 255 219 143 29 chr10 98010564 98010669 -42306096 - MER103 DNA DNA -38 128 12 435 256 161 11 chr10 98010857 98011037 -42305728 + MIR SINE MIR 35 241 -21 492 284 14 14 chr10 98011271 98011419 -42305346 + MIR3 SINE MIR 44 191 -17 183 100 0 0 chr10 98011837 98011867 -42304898 + (CATATA)n Simple_repeat Simple_repeat 1 30 0 242 261 63 27 chr10 98011955 98012066 -42304699 + MIR3 SINE MIR 90 204 -4 283 284 0 23 chr10 98012690 98012778 -42303987 - MIR3 SINE MIR -1 207 122 231 254 0 0 chr10 98013769 98013824 -42302941 + L1ME4a LINE L1 4961 5015 -1131 2223 122 28 3 chr10 98013892 98014213 -42302552 + L1PB4 LINE L1 5817 6145 -11 2273 88 7 0 chr10 98014238 98014535 -42302230 + AluSp SINE Alu 1 299 -14 591 247 157 45 chr10 98014754 98015199 -42301566 + L1ME4a LINE L1 5469 5963 -158 379 189 113 0 chr10 98015211 98015317 -42301448 + L1ME4a LINE L1 5998 6115 -6 2039 132 7 16 chr10 98015336 98015646 -42301119 + AluJb SINE Alu 1 307 -5 233 270 43 61 chr10 98015922 98016037 -42300728 + MIR SINE MIR 80 192 -70 650 225 69 19 chr10 98016745 98016905 -42299860 + MER5B DNA MER1_type 11 178 0 1345 185 59 18 chr10 98017614 98017933 -42298832 - L1ME3A LINE L1 -3 6161 5824 183 243 243 0 chr10 98017963 98018037 -42298728 - L2 LINE L2 -9 3263 3172 355 227 23 23 chr10 98018100 98018188 -42298577 - L2 LINE L2 -5 3308 3221 501 234 69 17 chr10 98018821 98018996 -42297769 - L1MC5 LINE L1 -48 7913 7730 990 205 95 0 chr10 98020626 98020826 -42295939 + MER20 DNA MER1_type 1 219 0 273 75 0 0 chr10 98020881 98020921 -42295844 + (CA)n Simple_repeat Simple_repeat 2 41 0 2734 159 19 9 chr10 98021907 98022329 -42294436 + MSTB LTR MaLR 1 426 0 9043 169 51 13 chr10 98022329 98023919 -42292846 + MSTB-int LTR MaLR 1 1651 0 2747 129 28 28 chr10 98023919 98024345 -42292420 + MSTB LTR MaLR 1 426 0 2073 151 0 0 chr10 98024763 98025062 -42291703 + AluSx SINE Alu 3 301 -11 1934 147 0 44 chr10 98025155 98025474 -42291291 - AluJb SINE Alu -7 305 1 204 40 0 0 chr10 98025649 98025674 -42291091 + (A)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr10 98025773 98025794 -42290971 + (A)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr10 98025826 98025850 -42290915 + AT_rich Low_complexity Low_complexity 1 24 0 210 346 77 54 chr10 98026017 98026497 -42290268 + L2 LINE L2 2172 2662 -652 738 276 60 0 chr10 98026512 98026711 -42290054 - L3 LINE CR1 -784 793 583 408 304 35 23 chr10 98026789 98026960 -42289805 - MIR SINE MIR -70 192 20 616 230 14 14 chr10 98027084 98027223 -42289542 - MIR SINE MIR -27 235 97 286 259 30 104 chr10 98027383 98027518 -42289247 - L2 LINE L2 -10 3303 3179 295 348 172 0 chr10 98027600 98027804 -42288961 - L2 LINE L2 -862 2452 2214 227 346 47 0 chr10 98028543 98028650 -42288115 + L2 LINE L2 3198 3309 -4 2178 110 0 0 chr10 98029212 98029503 -42287262 - AluSg1 SINE Alu -18 291 1 305 326 168 8 chr10 98029905 98030291 -42286474 + L1M4 LINE L1 3812 4259 -1887 849 181 0 13 chr10 98030333 98030482 -42286283 + LTR24 LTR ERV1 321 467 0 24 32 0 0 chr10 98030726 98030757 -42286008 + AT_rich Low_complexity Low_complexity 1 31 0 749 299 8 29 chr10 98032852 98033096 -42283669 - MIR SINE MIR -6 256 18 1195 195 17 7 chr10 98033928 98034172 -42282593 + MIR SINE MIR 15 258 -4 1081 161 115 7 chr10 98034239 98034631 -42282134 - MLT1D LTR MaLR 0 505 3 287 287 89 0 chr10 98034716 98034817 -42281948 - MIR SINE MIR -18 244 135 207 0 0 0 chr10 98035711 98035734 -42281031 + (A)n Simple_repeat Simple_repeat 1 23 0 623 260 20 0 chr10 98035777 98035927 -42280838 + MIR SINE MIR 3 155 -107 881 221 128 30 chr10 98035927 98036225 -42280540 - MER46C DNA MER2_type -1 337 11 268 266 16 0 chr10 98036252 98036316 -42280449 + MIR SINE MIR 176 240 -22 1001 144 132 11 chr10 98036453 98036627 -42280138 + MER3 DNA MER1_type 15 209 0 204 125 0 0 chr10 98037219 98037251 -42279514 + (CA)n Simple_repeat Simple_repeat 2 33 0 33 56 0 0 chr10 98039307 98039361 -42277404 + GC_rich Low_complexity Low_complexity 1 54 0 22 56 0 0 chr10 98039443 98039479 -42277286 + GC_rich Low_complexity Low_complexity 1 36 0 29 78 0 0 chr10 98039533 98039597 -42277168 + GC_rich Low_complexity Low_complexity 1 64 0 225 351 32 0 chr10 98039809 98039903 -42276862 - MIR SINE MIR -115 147 51 298 282 0 0 chr10 98039912 98039983 -42276782 - L2 LINE L2 0 3313 3243 556 253 95 37 chr10 98042585 98042714 -42274051 + MIR SINE MIR 17 162 -100 2736 83 25 19 chr10 98042714 98043076 -42273689 + THE1B LTR MaLR 1 364 0 556 253 95 37 chr10 98043076 98043136 -42273629 + MIR SINE MIR 162 217 -45 1403 149 21 37 chr10 98043438 98043680 -42273085 - AluJo SINE Alu -13 299 62 1090 265 196 18 chr10 98043825 98044270 -42272495 + MLT1G1 LTR MaLR 72 595 0 1424 254 124 33 chr10 98044271 98044368 -42272397 - L2 LINE L2 -1832 1482 1395 2549 65 7 0 chr10 98044368 98044674 -42272091 + AluY SINE Alu 1 308 -3 1424 254 124 33 chr10 98044674 98045036 -42271729 - L2 LINE L2 -1919 1395 981 530 222 146 38 chr10 98045062 98045247 -42271518 - MIR SINE MIR -42 220 16 222 209 0 0 chr10 98046008 98046051 -42270714 + CT-rich Low_complexity Low_complexity 2 44 0 2204 110 20 0 chr10 98046224 98046516 -42270249 + AluSx SINE Alu 1 298 -14 237 291 92 45 chr10 98046568 98046994 -42269771 + L1M4 LINE L1 2678 3123 -3023 409 359 44 6 chr10 98047319 98047478 -42269287 + LTR67 LTR ERVL 36 200 -357 641 162 0 19 chr10 98047491 98047596 -42269169 + LTR23 LTR ERV1 300 402 -35 270 278 0 0 chr10 98047608 98047698 -42269067 - L1MC4 LINE L1 -1339 6703 6614 182 156 22 0 chr10 98047698 98047743 -42269022 + (TA)n Simple_repeat Simple_repeat 2 47 0 1121 108 0 18 chr10 98047753 98047919 -42268846 - AluSg/x SINE Alu -1 311 149 255 295 13 13 chr10 98048211 98048289 -42268476 + MIR SINE MIR 3 80 -182 461 203 17 177 chr10 98048394 98048628 -42268137 + MIR SINE MIR 47 240 -22 225 189 0 0 chr10 98048738 98048775 -42267990 + MIR SINE MIR 204 240 -22 2471 36 4 0 chr10 98049261 98049572 -42267193 + AluY SINE Alu 1 312 0 286 161 12 148 chr10 98049869 98049895 -42266870 - L2 LINE L2 0 3313 3285 2268 95 0 0 chr10 98049895 98050205 -42266560 + AluSx SINE Alu 1 310 0 286 161 12 148 chr10 98050205 98050258 -42266507 - L2 LINE L2 -28 3285 3244 263 246 100 55 chr10 98051098 98051208 -42265557 + L1ME4a LINE L1 5969 6083 -38 224 204 0 23 chr10 98051235 98051279 -42265486 + (TG)n Simple_repeat Simple_repeat 2 44 0 319 345 64 12 chr10 98051551 98051722 -42265043 - MIR SINE MIR -75 187 8 21 0 0 0 chr10 98051809 98051830 -42264935 + AT_rich Low_complexity Low_complexity 1 21 0 201 171 24 0 chr10 98051943 98051984 -42264781 + (CCCTAA)n Simple_repeat Simple_repeat 4 45 0 1685 161 15 4 chr10 98052754 98053055 -42263710 - AluJb SINE Alu 0 308 5 1813 174 3 0 chr10 98053795 98054094 -42262671 + AluJo SINE Alu 5 304 -8 515 311 44 6 chr10 98054601 98054781 -42261984 - MIR SINE MIR -65 197 11 1982 117 7 3 chr10 98055776 98056058 -42260707 + AluSx SINE Alu 20 302 -10 21 49 0 49 chr10 98056405 98056466 -42260299 + AT_rich Low_complexity Low_complexity 1 58 0 645 169 23 31 chr10 98058132 98058262 -42258503 + MER3 DNA MER1_type 41 122 -87 1991 163 24 3 chr10 98058270 98058651 -42258114 + MER3 DNA MER1_type 2234 2622 0 484 301 97 24 chr10 98059596 98059802 -42256963 + MIR SINE MIR 42 262 0 250 312 37 18 chr10 98059832 98059941 -42256824 + MIR3 SINE MIR 50 160 -48 278 206 216 10 chr10 98060049 98060146 -42256619 - MER103 DNA DNA -49 117 1 2374 110 0 0 chr10 98060170 98060480 -42256285 - AluSg SINE Alu 0 310 1 2104 130 0 3 chr10 98060526 98060826 -42255939 - AluSx SINE Alu -11 301 3 25 0 0 0 chr10 98060859 98060884 -42255881 + AT_rich Low_complexity Low_complexity 1 25 0 1993 170 19 32 chr10 98061379 98061749 -42255016 - MLT1A1 LTR MaLR 0 365 1 581 301 5 25 chr10 98061749 98061945 -42254820 - MER117 DNA MER1_type -4 193 2 364 262 12 0 chr10 98061946 98062030 -42254735 - MIR3 SINE MIR -48 160 76 444 240 276 15 chr10 98062592 98062788 -42253977 + MIR SINE MIR 16 262 0 181 255 21 0 chr10 98064953 98065000 -42251765 + L2 LINE L2 3216 3263 -9 572 247 106 0 chr10 98065691 98065861 -42250904 + MIR SINE MIR 21 208 -54 2013 230 46 50 chr10 98065911 98066472 -42250293 + MLT1G LTR MaLR 31 589 -1 1900 116 6 63 chr10 98066612 98066930 -42249835 - AluSx SINE Alu -12 300 1 1397 197 70 7 chr10 98067031 98067315 -42249450 - AluJo SINE Alu -10 302 1 1108 261 52 42 chr10 98067934 98068360 -42248405 - LTR16A1 LTR ERVL -27 430 1 193 256 23 15 chr10 98068506 98068639 -42248126 + GA-rich Low_complexity Low_complexity 1 134 0 761 234 45 91 chr10 98068652 98068938 -42247827 - LTR16A LTR ERVL 0 450 178 2679 89 31 14 chr10 98068969 98069327 -42247438 + THE1B LTR MaLR 1 364 0 310 167 15 0 chr10 98069493 98069559 -42247206 - L1MDa LINE L1 -5072 1468 1402 193 211 88 0 chr10 98069690 98069747 -42247018 - MER5C DNA MER1_type -55 269 208 240 268 61 12 chr10 98069773 98069855 -42246910 - MER5C DNA MER1_type -234 90 5 457 248 198 6 chr10 98071076 98071233 -42245532 - MIR SINE MIR -11 251 65 298 277 62 54 chr10 98071403 98071515 -42245250 - L2 LINE L2 -15 3298 3186 339 288 189 7 chr10 98071680 98071833 -42244932 + MIR SINE MIR 9 189 -73 289 276 181 8 chr10 98071839 98071966 -42244799 - MIR SINE MIR -76 186 38 399 41 0 0 chr10 98072523 98072572 -42244193 + (TA)n Simple_repeat Simple_repeat 2 50 0 225 0 0 0 chr10 98072572 98072597 -42244168 + (T)n Simple_repeat Simple_repeat 1 25 0 1521 278 85 15 chr10 98072884 98073344 -42243421 - MLT1K LTR MaLR -86 502 11 182 188 0 0 chr10 98073446 98073478 -42243287 + MIR3 SINE MIR 154 185 -23 410 321 0 48 chr10 98073963 98074131 -42242634 + MER5B DNA MER1_type 2 161 -17 335 271 23 46 chr10 98074244 98074380 -42242385 + MIR3 SINE MIR 64 199 -9 644 218 106 48 chr10 98074996 98075184 -42241581 - MIR SINE MIR -13 249 51 1818 150 0 37 chr10 98075214 98075530 -42241235 - AluJo SINE Alu 0 312 6 801 260 72 87 chr10 98075565 98075980 -42240785 - MLT1I LTR MaLR 0 409 1 293 253 50 20 chr10 98076007 98076106 -42240659 + L2 LINE L2 3212 3313 0 1949 170 3 0 chr10 98076355 98076666 -42240099 + AluJb SINE Alu 1 312 0 2449 75 0 3 chr10 98076800 98077106 -42239659 - AluY SINE Alu -6 305 1 3311 146 35 3 chr10 98077347 98078130 -42238635 + L1MB1 LINE L1 5025 5829 -339 21 57 0 0 chr10 98078149 98078184 -42238581 + AT_rich Low_complexity Low_complexity 1 35 0 2346 104 10 0 chr10 98078243 98078552 -42238213 + AluSq SINE Alu 1 312 -1 2319 64 3 7 chr10 98078555 98078850 -42237915 + AluY SINE Alu 1 294 -17 1009 124 26 0 chr10 98081038 98081191 -42235574 + AluSg/x SINE Alu 133 289 -21 248 259 123 0 chr10 98081409 98081490 -42235275 + LTR67 LTR ERVL 460 550 -7 239 301 32 11 chr10 98081519 98081612 -42235153 - L2 LINE L2 -1 3271 3177 281 272 87 0 chr10 98081732 98081824 -42234941 - MER103 DNA DNA -52 114 15 1078 313 82 53 chr10 98081860 98082909 -42233856 + L1ME3A LINE L1 3520 4598 -1548 1695 170 7 17 chr10 98083293 98083430 -42233335 + AluJb SINE Alu 1 138 -174 183 42 0 0 chr10 98083430 98083454 -42233311 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1695 170 7 17 chr10 98083454 98083605 -42233160 + AluJb SINE Alu 138 286 -26 183 42 0 0 chr10 98083605 98083629 -42233136 + (GA)n Simple_repeat Simple_repeat 2 25 0 799 293 49 71 chr10 98083982 98084623 -42232142 + L1ME3A LINE L1 5289 5927 -243 222 37 0 0 chr10 98084627 98084654 -42232111 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1913 160 3 0 chr10 98084659 98084946 -42231819 - AluJo SINE Alu -24 288 1 26 30 0 0 chr10 98084957 98084990 -42231775 + AT_rich Low_complexity Low_complexity 1 33 0 5777 134 29 37 chr10 98085163 98086247 -42230518 + L1MC1 LINE L1 5137 6211 -122 828 142 0 0 chr10 98086247 98086374 -42230391 - FRAM SINE Alu -13 163 37 790 123 0 123 chr10 98086374 98086528 -42230237 + L1MC1 LINE L1 6199 6333 0 226 258 86 33 chr10 98086759 98086910 -42229855 + L1M4 LINE L1 4872 5030 -1116 308 324 95 27 chr10 98087301 98087449 -42229316 - MIR SINE MIR -8 254 97 1855 154 0 77 chr10 98087449 98087787 -42228978 - AluJo SINE Alu 0 312 1 692 257 45 65 chr10 98087820 98088065 -42228700 - MER112 DNA MER1_type -20 240 1 291 321 93 7 chr10 98088618 98088758 -42228007 - MIR SINE MIR -109 153 2 21 0 0 0 chr10 98089453 98089474 -42227291 + AT_rich Low_complexity Low_complexity 1 21 0 213 280 13 13 chr10 98089803 98089878 -42226887 + L2 LINE L2 3239 3313 0 1954 125 0 45 chr10 98090111 98090424 -42226341 - AluJo SINE Alu -13 299 1 1973 198 68 53 chr10 98090765 98090878 -42225887 - MLT1D LTR MaLR 0 505 395 2230 98 13 3 chr10 98090878 98091185 -42225580 + AluY SINE Alu 1 310 -1 1973 198 68 53 chr10 98091185 98091560 -42225205 - MLT1D LTR MaLR -110 395 10 354 233 133 24 chr10 98091709 98091861 -42224904 - MIR SINE MIR -33 229 1 1125 194 40 5 chr10 98092627 98092849 -42223916 - MLT1A1 LTR MaLR 0 365 136 921 228 24 78 chr10 98092851 98093271 -42223494 + MLT1A2 LTR MaLR 1 368 -6 1351 216 29 76 chr10 98093273 98093723 -42223042 + L1ME2 LINE L1 5727 6155 -9 971 258 36 39 chr10 98093883 98094170 -42222595 + MLT1H1 LTR MaLR 1 289 -291 603 156 66 3 chr10 98094170 98094354 -42222411 - MER2 DNA MER2_type -24 321 85 773 215 41 41 chr10 98094365 98094560 -42222205 - MER74A LTR ERVL -68 490 296 7224 63 15 14 chr10 98094565 98096065 -42220700 - SVA Other Other -756 1386 117 1253 201 54 4 chr10 98096106 98096365 -42220400 + L1P LINE L1 11 282 -5864 294 280 204 32 chr10 98096804 98097118 -42219647 - L2 LINE L2 -944 2370 2003 1184 214 33 4 chr10 98097244 98097520 -42219245 + L1P LINE L1 4896 5179 -967 581 266 60 52 chr10 98097823 98098071 -42218694 + MIR SINE MIR 5 254 -8 6071 210 78 2 chr10 98098571 98100071 -42216694 + L1MB7 LINE L1 3815 5437 -743 766 172 0 9 chr10 98100080 98100196 -42216569 + FLAM_C SINE Alu 4 118 -25 252 59 0 0 chr10 98100202 98100236 -42216529 + (TA)n Simple_repeat Simple_repeat 2 35 0 3678 144 29 29 chr10 98100236 98100937 -42215828 + L1MB7 LINE L1 5426 6126 -58 839 122 0 0 chr10 98100958 98101065 -42215700 - U6 snRNA snRNA 0 107 1 923 185 0 0 chr10 98101123 98101269 -42215496 - FRAM SINE Alu -30 146 1 2966 196 79 73 chr10 98101461 98102268 -42214497 - MER21B LTR ERV1 -51 812 1 480 272 20 42 chr10 98102877 98103069 -42213696 + MIR3 SINE MIR 2 192 -16 326 235 134 77 chr10 98103137 98103384 -42213381 + MIR SINE MIR 2 262 0 25 0 0 0 chr10 98103389 98103414 -42213351 + AT_rich Low_complexity Low_complexity 1 25 0 1105 52 0 0 chr10 98104164 98104300 -42212465 - AluSp/q SINE Alu -2 311 176 212 289 268 21 chr10 98104763 98105140 -42211625 + L2 LINE L2 2003 2472 -842 225 382 0 11 chr10 98105759 98105848 -42210917 + MIR SINE MIR 5 92 -170 348 261 78 10 chr10 98106258 98106390 -42210375 + MIR SINE MIR 94 234 -28 259 149 0 90 chr10 98106977 98107044 -42209721 - MER5A DNA MER1_type -120 69 9 222 311 0 14 chr10 98107052 98107126 -42209639 + MIR SINE MIR 190 262 0 250 259 12 24 chr10 98107817 98107902 -42208863 + CT-rich Low_complexity Low_complexity 4 87 0 571 294 47 43 chr10 98108353 98108564 -42208201 - MIR SINE MIR -39 223 12 277 330 27 87 chr10 98108847 98109032 -42207733 + L2 LINE L2 3098 3271 -1 2067 145 0 0 chr10 98109060 98109422 -42207343 - AluSx SINE Alu 0 362 1 236 238 145 106 chr10 98110806 98111033 -42205732 - Charlie8 DNA MER1_type -1003 1414 92 376 248 163 23 chr10 98111495 98111624 -42205141 + L2 LINE L2 2688 2834 -480 305 267 0 33 chr10 98111659 98111749 -42205016 + MIR SINE MIR 176 262 0 217 297 27 36 chr10 98111783 98111894 -42204871 + L2 LINE L2 2871 2980 -292 213 65 0 0 chr10 98112232 98112263 -42204502 + (CA)n Simple_repeat Simple_repeat 1 31 0 283 330 11 11 chr10 98112318 98112406 -42204359 + MIR SINE MIR 12 99 -163 375 278 214 6 chr10 98113494 98113667 -42203098 + L2 LINE L2 3105 3313 0 219 203 0 0 chr10 98113905 98113964 -42202801 + (CAT)n Simple_repeat Simple_repeat 2 60 0 1309 208 0 39 chr10 98114010 98114318 -42202447 - AluJo SINE Alu -6 306 11 380 267 30 0 chr10 98114322 98114423 -42202342 - MIR SINE MIR -48 214 111 253 226 9 19 chr10 98114843 98114949 -42201816 + CT-rich Low_complexity Low_complexity 2 106 0 1666 98 0 0 chr10 98115800 98116015 -42200750 - AluSg/x SINE Alu -14 296 82 545 174 10 31 chr10 98116015 98116113 -42200652 - MER2 DNA MER2_type -246 99 4 536 278 14 61 chr10 98116145 98116317 -42200448 + MLT1G LTR MaLR 389 551 -39 2205 90 3 32 chr10 98116317 98116627 -42200138 - AluSc SINE Alu -8 301 1 536 278 14 61 chr10 98116627 98116666 -42200099 + MLT1G LTR MaLR 551 590 0 335 253 196 26 chr10 98116697 98117150 -42199615 - MLT1F LTR MaLR 0 595 20 283 282 93 37 chr10 98117169 98117385 -42199380 + L1MC4a LINE L1 6111 6338 -1470 33 25 0 0 chr10 98117390 98117430 -42199335 + AT_rich Low_complexity Low_complexity 1 40 0 3656 231 101 78 chr10 98117460 98118043 -42198722 + L1MC4 LINE L1 6345 6913 -1129 281 81 0 0 chr10 98118043 98118080 -42198685 - tRNA-Gly-GGA tRNA tRNA -37 38 2 3656 231 101 78 chr10 98118080 98118706 -42198059 + L1MC4 LINE L1 6913 7641 -401 2056 135 0 7 chr10 98118706 98119003 -42197762 + AluSx SINE Alu 1 295 -17 3656 231 101 78 chr10 98119003 98119412 -42197353 + L1MC4 LINE L1 7641 8039 -3 341 240 39 0 chr10 98119723 98119827 -42196938 + L1ME4a LINE L1 5727 5834 -287 2296 102 0 0 chr10 98119945 98120239 -42196526 + AluSx SINE Alu 1 294 -18 30 27 0 0 chr10 98120532 98120569 -42196196 + AT_rich Low_complexity Low_complexity 1 37 0 1158 196 0 0 chr10 98120613 98120802 -42195963 + MER5A DNA MER1_type 1 189 0 313 241 0 0 chr10 98120889 98120947 -42195818 + MER81 DNA DNA 1 58 -56 645 132 23 16 chr10 98120948 98121077 -42195688 - L1MB7 LINE L1 -95 6089 5960 241 312 34 122 chr10 98122460 98122813 -42193952 + L2 LINE L2 2920 3241 -31 2894 79 104 7 chr10 98122813 98123174 -42193591 + MLT2A1 LTR ERVL 1 407 -37 972 61 22 28 chr10 98123174 98123354 -42193411 + (TA)n Simple_repeat Simple_repeat 1 179 0 2894 79 104 7 chr10 98123354 98123397 -42193368 + MLT2A1 LTR ERVL 407 444 0 317 250 15 0 chr10 98123405 98123473 -42193292 - L2 LINE L2 -1 3271 3203 430 181 14 0 chr10 98123508 98123580 -42193185 + MSTB LTR MaLR 1 73 -353 287 266 77 42 chr10 98123630 98123773 -42192992 - MER5A DNA MER1_type -6 183 36 * 410 225 42 42 chr10 98123657 98123777 -42192988 + MER5A DNA MER1_type 50 169 -20 590 71 12 0 chr10 98127045 98127129 -42189636 + (GAAA)n Simple_repeat Simple_repeat 3 87 0 272 198 354 10 chr10 98127129 98127225 -42189540 - MER5B DNA MER1_type -48 130 2 631 230 40 20 chr10 98127239 98127391 -42189374 - MER5B DNA MER1_type -22 156 2 330 244 43 11 chr10 98127536 98127651 -42189114 - MIR SINE MIR 0 262 138 203 318 95 21 chr10 98128041 98128146 -42188619 - MIR SINE MIR -85 123 40 1463 180 0 4 chr10 98128652 98128891 -42187874 + AluJb SINE Alu 6 243 -69 699 46 0 0 chr10 98128904 98128991 -42187774 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 338 338 7 7 chr10 98130183 98130325 -42186440 + MARNA DNA Mariner 107 248 -338 341 325 24 8 chr10 98130365 98130488 -42186277 + MIR SINE MIR 21 145 -63 5312 94 62 24 chr10 98130498 98131096 -42185669 - Tigger3b DNA MER2_type -1797 1231 584 2132 146 25 6 chr10 98131096 98131453 -42185312 + THE1B LTR MaLR 1 364 0 5312 94 62 24 chr10 98131453 98131777 -42184988 - Tigger3b DNA MER2_type -2444 584 274 664 157 0 0 chr10 98131775 98131877 -42184888 - Tigger3b DNA MER2_type -1129 102 1 * 1605 218 116 78 chr10 98132081 98132344 -42184421 + MER21B LTR ERV1 17 269 -594 3193 13 3 5 chr10 98132344 98132719 -42184046 + L1PA2 LINE L1 5782 6155 0 1605 218 116 78 chr10 98132719 98133143 -42183622 + MER21B LTR ERV1 269 730 -133 1125 146 0 0 chr10 98134300 98134471 -42182294 + AluSg/x SINE Alu 119 289 -21 21 0 0 0 chr10 98134585 98134606 -42182159 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr10 98135026 98135058 -42181707 + AT_rich Low_complexity Low_complexity 1 32 0 317 200 140 10 chr10 98135235 98135335 -42181430 - L1ME4a LINE L1 -31 6090 5978 274 305 76 48 chr10 98135350 98135455 -42181310 - L2 LINE L2 -9 3304 3197 1097 209 148 89 chr10 98135847 98136876 -42179889 + L1ME2 LINE L1 4995 6089 -75 307 198 31 42 chr10 98136881 98136977 -42179788 - L1MD3 LINE L1 -12 7983 7889 431 293 50 7 chr10 98137224 98137364 -42179401 + MER5B DNA MER1_type 1 146 -32 599 237 0 8 chr10 98137370 98137501 -42179264 + FLAM_A SINE Alu 13 142 0 223 150 25 0 chr10 98137502 98137542 -42179223 + MER5B DNA MER1_type 138 178 0 254 54 0 0 chr10 98137588 98137625 -42179140 + tRNA-Leu-CTT tRNA tRNA 1 37 -48 377 294 64 64 chr10 98139306 98139510 -42177255 + MIR SINE MIR 53 256 -6 212 169 68 34 chr10 98140447 98140506 -42176259 + L2 LINE L2 3253 3313 0 347 232 134 0 chr10 98140574 98140686 -42176079 - MIR3 SINE MIR -24 184 58 605 250 113 34 chr10 98140813 98141017 -42175748 - L2 LINE L2 0 3313 3094 2285 181 25 30 chr10 98141019 98141543 -42175222 + L1MB8 LINE L1 5631 6151 -27 794 247 35 36 chr10 98141544 98141923 -42174842 - L2 LINE L2 -225 3088 2714 650 228 33 62 chr10 98144470 98144711 -42172054 - MER102b DNA MER1_type -5 336 103 985 198 48 79 chr10 98144727 98145081 -42171684 - MLT1A1 LTR MaLR -22 343 1 269 284 0 25 chr10 98145081 98145147 -42171618 - MER102b DNA MER1_type -277 64 1 419 130 13 0 chr10 98145486 98145563 -42171202 - MSTC LTR MaLR 0 428 351 1743 155 10 55 chr10 98145563 98145873 -42170892 + AluJo SINE Alu 1 296 -16 575 167 9 0 chr10 98145876 98145990 -42170775 + GA-rich Low_complexity Low_complexity 4 118 0 778 202 106 25 chr10 98145990 98146261 -42170504 - MSTC LTR MaLR -56 372 51 472 263 62 21 chr10 98146279 98146473 -42170292 + MLT1K LTR MaLR 379 580 -8 323 228 11 76 chr10 98146487 98146579 -42170186 - L2 LINE L2 -1 3271 3186 2015 233 23 86 chr10 98146754 98146863 -42169902 - L1MC4 LINE L1 -247 7795 7681 1485 177 0 50 chr10 98146863 98147146 -42169619 + AluJb SINE Alu 1 269 -43 2015 233 23 86 chr10 98147146 98147849 -42168916 - L1MC4 LINE L1 -361 7681 7034 2866 204 85 30 chr10 98147908 98148612 -42168153 - L1MC4 LINE L1 -148 7894 7135 2048 122 17 0 chr10 98148612 98148908 -42167857 - AluSx SINE Alu -11 301 1 2866 204 85 30 chr10 98148908 98149039 -42167726 - L1MC4 LINE L1 -907 7135 7013 1339 160 5 9 chr10 98149045 98149258 -42167507 - AluJb SINE Alu -15 297 86 1910 234 157 48 chr10 98149263 98150071 -42166694 - L1MC4a LINE L1 -885 6923 5982 2124 104 0 63 chr10 98150071 98150389 -42166376 - AluSx SINE Alu -14 298 1 1910 234 157 48 chr10 98150389 98150588 -42166177 - L1MC4a LINE L1 -1826 5982 5806 * 3633 190 16 9 chr10 98150580 98151106 -42165659 - L1MB8 LINE L1 -5 6173 5639 1761 173 18 12 chr10 98151106 98151447 -42165318 - MER61A LTR ERV1 0 343 1 3633 190 16 9 chr10 98151447 98151689 -42165076 - L1MB8 LINE L1 -539 5639 5400 212 224 0 90 chr10 98151742 98151809 -42164956 - L2 LINE L2 -76 3196 3136 213 39 0 0 chr10 98151815 98151841 -42164924 + (TTG)n Simple_repeat Simple_repeat 2 27 0 38701 66 8 5 chr10 98151899 98158024 -42158741 - L1PA5 LINE L1 0 6154 11 2143 113 3 3 chr10 98158147 98158447 -42158318 - AluSc SINE Alu -9 300 1 823 291 12 25 chr10 98160122 98160366 -42156399 - MIR SINE MIR -21 241 1 2147 106 0 62 chr10 98160447 98160768 -42155997 + AluSx SINE Alu 1 301 -11 974 152 11 39 chr10 98160773 98160951 -42155814 + FRAM SINE Alu 1 169 -7 1549 211 21 0 chr10 98161301 98161586 -42155179 + AluJo SINE Alu 1 291 -21 2613 62 0 0 chr10 98161586 98161893 -42154872 + AluY SINE Alu 1 307 -4 26 0 0 0 chr10 98161990 98162016 -42154749 + AT_rich Low_complexity Low_complexity 1 26 0 808 208 29 23 chr10 98162544 98162717 -42154048 + FRAM SINE Alu 1 173 -3 3935 174 18 8 chr10 98162983 98163768 -42152997 - L1MA10 LINE L1 -40 6294 5502 1959 158 3 0 chr10 98163835 98164132 -42152633 + AluJb SINE Alu 3 300 -12 257 240 103 10 chr10 98164197 98164298 -42152467 + MIR SINE MIR 80 146 -62 1677 154 60 0 chr10 98164811 98165078 -42151687 + AluJb SINE Alu 2 284 -28 290 278 87 8 chr10 98165102 98165228 -42151537 + LTR16A1 LTR ERVL 316 451 -6 185 128 256 0 chr10 98165345 98165384 -42151381 - MIR3 SINE MIR -33 175 127 26 64 0 0 chr10 98165388 98165435 -42151330 + AT_rich Low_complexity Low_complexity 1 47 0 2133 99 0 7 chr10 98165535 98165817 -42150948 + AluSx SINE Alu 1 280 -32 244 0 0 53 chr10 98165817 98165855 -42150910 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 3367 102 14 2 chr10 98165858 98166349 -42150416 - L1PA13 LINE L1 -19 6144 5648 274 271 147 29 chr10 98166364 98166637 -42150128 - L1ME LINE L1 -287 5834 5530 450 279 50 60 chr10 98168034 98168235 -42148530 + MIR SINE MIR 46 244 -18 625 218 147 82 chr10 98169798 98170165 -42146600 - MLT1L LTR MaLR -224 391 1 495 207 80 0 chr10 98170651 98170801 -42145964 + L1MC4 LINE L1 7680 7841 -201 2280 151 25 5 chr10 98170812 98171216 -42145549 + MLT2C2 LTR ERVL 1 412 -52 818 62 34 23 chr10 98171283 98171460 -42145305 + (TA)n Simple_repeat Simple_repeat 2 180 0 353 134 82 82 chr10 98171520 98171617 -42145148 + L1MC4 LINE L1 7943 8039 -3 521 269 65 32 chr10 98173103 98173319 -42143446 + MIR SINE MIR 31 253 -9 2214 139 111 2 chr10 98173389 98173805 -42142960 - LOR1b LTR ERV1 0 461 1 321 177 139 0 chr10 98174000 98174079 -42142686 - LOR1b LTR ERV1 -371 90 1 * 1377 184 27 3 chr10 98174079 98174371 -42142394 + MER33 DNA MER1_type 25 323 -1 1926 135 23 7 chr10 98174766 98175069 -42141696 - AluSx SINE Alu -4 308 1 229 226 39 49 chr10 98175069 98175171 -42141594 - LTR67 LTR ERVL -31 526 426 308 201 144 86 chr10 98175427 98175566 -42141199 + MLT1J2 LTR MaLR 1 147 -303 404 256 49 37 chr10 98175641 98175805 -42140960 + MLT1J2 LTR MaLR 285 450 0 21 0 0 0 chr10 98176245 98176266 -42140499 + AT_rich Low_complexity Low_complexity 1 21 0 368 301 91 46 chr10 98176391 98176610 -42140155 + MIR SINE MIR 8 236 -26 193 333 37 96 chr10 98177300 98177435 -42139330 + MIR SINE MIR 2 128 -134 203 105 26 26 chr10 98177787 98177825 -42138940 + (TATG)n Simple_repeat Simple_repeat 3 40 0 315 0 0 0 chr10 98177899 98177934 -42138831 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 742 225 59 71 chr10 98178075 98178397 -42138368 - L1MC4a LINE L1 -1869 5939 5550 811 182 0 0 chr10 98178495 98178627 -42138138 - FRAM SINE Alu -39 137 6 1673 170 77 3 chr10 98178647 98178971 -42137794 - Charlie1b DNA MER1_type -175 348 1 1099 204 73 73 chr10 98179183 98179512 -42137253 - MLT1G1 LTR MaLR -42 553 225 412 331 72 45 chr10 98181402 98181692 -42135073 - L2 LINE L2 -608 2706 2409 360 215 13 0 chr10 98183214 98183293 -42133472 - MER116 DNA Mariner 0 80 1 27 81 0 0 chr10 98185002 98185064 -42131701 + AT_rich Low_complexity Low_complexity 1 62 0 463 242 125 47 chr10 98185067 98185410 -42131355 + L1ME4a LINE L1 5741 6110 -11 213 271 51 0 chr10 98185629 98185688 -42131077 - L2 LINE L2 0 3272 3211 250 259 61 84 chr10 98186394 98186525 -42130240 - MIR SINE MIR -50 212 85 335 254 216 30 chr10 98187591 98187725 -42129040 + L2 LINE L2 3112 3270 -2 365 264 0 66 chr10 98189376 98189436 -42127329 + MER5B DNA MER1_type 3 55 -123 1681 180 0 17 chr10 98189436 98189736 -42127029 + AluJb SINE Alu 3 297 -15 365 264 0 66 chr10 98189736 98189781 -42126984 + MER5B DNA MER1_type 55 101 -77 231 200 0 88 chr10 98190843 98190923 -42125842 + MIR3 SINE MIR 104 176 -32 315 0 0 0 chr10 98192183 98192218 -42124547 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 230 285 159 33 chr10 98192693 98192840 -42123925 + MIR SINE MIR 31 190 -71 642 190 7 51 chr10 98192910 98193047 -42123718 + MER94 DNA DNA 1 131 -3 823 147 39 0 chr10 98193101 98193230 -42123535 + AluJo SINE Alu 1 134 -178 2293 80 7 0 chr10 98193775 98194063 -42122702 + AluSq SINE Alu 21 310 -3 206 225 0 0 chr10 98194247 98194287 -42122478 - L2 LINE L2 -674 2640 2601 3336 162 28 5 chr10 98195047 98195626 -42121139 + L1MB3 LINE L1 5585 6176 -7 252 303 34 0 chr10 98195817 98195906 -42120859 - L2 LINE L2 -4 3309 3218 185 321 131 0 chr10 98196350 98196434 -42120331 - MIR SINE MIR -2 260 166 719 239 65 25 chr10 98196438 98196639 -42120126 + MIR SINE MIR 2 210 -52 558 278 12 12 chr10 98196666 98196828 -42119937 - MIR SINE MIR -100 162 1 930 182 48 6 chr10 98197675 98197840 -42118925 - AluJo SINE Alu -140 172 1 1204 267 37 35 chr10 98198060 98198465 -42118300 - L1MEc LINE L1 -4504 1892 1487 28 29 0 0 chr10 98198508 98198543 -42118222 + AT_rich Low_complexity Low_complexity 1 35 0 7030 140 18 14 chr10 98198543 98200507 -42116258 - L1MA3 LINE L1 0 7724 5744 2415 70 0 26 chr10 98200507 98200819 -42115946 + AluY SINE Alu 1 304 -7 7030 140 18 14 chr10 98200819 98201073 -42115692 - L1MA3 LINE L1 -1980 5744 5492 802 225 6 0 chr10 98201058 98201240 -42115525 - L1MA3 LINE L1 -3203 4362 4180 * 1703 154 3 49 chr10 98201263 98201569 -42115196 + AluJb SINE Alu 1 292 -20 10633 120 17 28 chr10 98201581 98203582 -42113183 - L1MA3 LINE L1 -3648 3917 1933 299 297 47 0 chr10 98203590 98203718 -42113047 - L1MEc LINE L1 -4950 1446 1313 295 154 154 15 chr10 98204506 98204571 -42112194 + MER84 LTR ERVI 1 74 -433 3139 137 45 14 chr10 98204571 98205062 -42111703 + MER84 LTR ERV1 2 507 0 1076 235 81 44 chr10 98206753 98207228 -42109537 - L1MEc LINE L1 -5133 1072 623 2267 104 7 0 chr10 98207249 98207547 -42109218 + AluSx SINE Alu 1 300 -12 1922 136 6 40 chr10 98207839 98208162 -42108603 - AluSx SINE Alu 0 312 1 1576 217 45 24 chr10 98208299 98208714 -42108051 - L1ME3A LINE L1 -4 6166 5744 288 246 16 0 chr10 98208851 98208912 -42107853 - L2 LINE L2 -5 3308 3247 591 354 106 10 chr10 98209276 98209852 -42106913 + L2 LINE L2 2141 2771 -543 228 311 40 98 chr10 98210002 98210279 -42106486 + L2 LINE L2 2804 3064 -208 348 174 257 28 chr10 98210482 98210591 -42106174 - MLT1I LTR MaLR -3 406 273 219 239 0 0 chr10 98210621 98210667 -42106098 + (TG)n Simple_repeat Simple_repeat 1 46 0 848 172 59 18 chr10 98210679 98210848 -42105917 - L1MB4 LINE L1 0 6180 6005 776 236 46 10 chr10 98211563 98211758 -42105007 + MIR SINE MIR 40 241 -21 205 333 23 102 chr10 98211826 98212003 -42104762 + L2 LINE L2 3048 3210 -62 1063 109 21 31 chr10 98212321 98212513 -42104252 + L1MA5A LINE L1 6104 6293 -4 3875 154 120 25 chr10 98213735 98214230 -42102535 - LTR39 LTR ERV1 0 783 198 2380 71 0 16 chr10 98214230 98214538 -42102227 + AluY SINE Alu 1 303 -8 3875 154 120 25 chr10 98214538 98214757 -42102008 - LTR39 LTR ERV1 -585 198 1 278 293 144 43 chr10 98215400 98215588 -42101177 + L3 LINE CR1 243 449 -1128 213 227 37 135 chr10 98215630 98215793 -42100972 - MIR SINE MIR -40 222 76 478 255 82 112 chr10 98215853 98216316 -42100449 - MLT1F LTR MaLR -4 545 22 450 324 33 28 chr10 98216345 98216527 -42100238 - MLT1K LTR MaLR -66 522 340 299 198 72 153 chr10 98216726 98216913 -42099852 + MLT1L LTR MaLR 110 351 -264 409 254 22 51 chr10 98217089 98217227 -42099538 - MLT1K LTR MaLR -439 149 16 263 360 0 0 chr10 98217315 98217415 -42099350 - MIR SINE MIR -63 145 46 289 265 36 12 chr10 98217452 98217535 -42099230 + L3 LINE CR1 704 788 -789 382 354 58 29 chr10 98217553 98217686 -42099079 + L3 LINE CR1 900 1043 -534 2669 173 63 45 chr10 98217686 98218240 -42098525 - MLT1F1 LTR MaLR 0 567 4 382 354 58 29 chr10 98218240 98218312 -42098453 + L3 LINE CR1 1043 1111 -466 249 406 16 8 chr10 98218377 98218505 -42098260 + L2 LINE L2 3137 3265 -7 801 276 74 77 chr10 98218520 98218951 -42097814 + L3 LINE CR1 1147 1576 -1 23 0 0 0 chr10 98219240 98219263 -42097502 + AT_rich Low_complexity Low_complexity 1 23 0 872 103 9 0 chr10 98219271 98219387 -42097378 - FLAM_C SINE Alu -16 117 1 342 246 140 62 chr10 98219522 98219611 -42097154 - Charlie8 DNA MER1_type -2224 193 112 1714 179 14 7 chr10 98219611 98219907 -42096858 - AluJb SINE Alu -14 298 1 342 246 140 62 chr10 98219907 98219996 -42096769 - Charlie8 DNA MER1_type -2305 112 1 1425 135 12 20 chr10 98220492 98220737 -42096028 + L1MB3 LINE L1 5941 6183 0 183 80 0 0 chr10 98220849 98220874 -42095891 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 330 240 42 21 chr10 98221574 98221670 -42095095 - LTR33 LTR ERVL -96 425 328 401 289 28 28 chr10 98221766 98221908 -42094857 - LTR33 LTR ERVL -379 142 1 1994 144 0 3 chr10 98221923 98222215 -42094550 + AluJo SINE Alu 1 291 -21 2370 164 81 5 chr10 98222234 98222630 -42094135 - MSTB LTR MaLR 0 426 1 7397 166 31 124 chr10 98222630 98223476 -42093289 - MSTB-int LTR MaLR 0 1651 728 832 148 0 22 chr10 98223476 98223611 -42093154 - AluJb SINE Alu -180 132 1 7397 166 31 124 chr10 98223611 98224066 -42092699 - MSTB-int LTR MaLR -923 728 419 2249 67 32 3 chr10 98224066 98224348 -42092417 + AluY SINE Alu 1 290 -21 7397 166 31 124 chr10 98224348 98224732 -42092033 - MSTB-int LTR MaLR -1232 419 1 2582 118 76 13 chr10 98224732 98225129 -42091636 - MSTB LTR MaLR 0 426 5 279 295 26 0 chr10 98225139 98225217 -42091548 + MIR SINE MIR 35 114 -148 364 250 83 9 chr10 98225321 98225429 -42091336 + MLT1L LTR MaLR 168 283 -332 259 250 0 17 chr10 98225642 98225702 -42091063 + MLT1L LTR MaLR 557 615 0 197 239 34 102 chr10 98225727 98225815 -42090950 + MIR SINE MIR 148 229 -33 * 752 268 82 26 chr10 98225772 98226003 -42090762 - MIR SINE MIR 0 262 19 422 148 182 0 chr10 98227388 98227476 -42089289 - MLT1J LTR MaLR -318 193 90 3794 177 28 60 chr10 98227663 98227954 -42088811 - MER44D DNA MER2_type -1883 604 305 3804 141 67 25 chr10 98227954 98228598 -42088167 - LTR51 LTR ERV1 0 671 1 3794 177 28 60 chr10 98228598 98229062 -42087703 - MER44D DNA MER2_type -2182 305 1 2051 109 0 7 chr10 98229186 98229469 -42087296 - AluSx SINE Alu -9 303 23 702 185 49 142 chr10 98229637 98229962 -42086803 + MER51C LTR ERV1 346 640 0 486 153 12 12 chr10 98230102 98230187 -42086578 - LTR8A LTR ERV1 -425 302 218 * 2672 171 43 12 chr10 98230185 98230701 -42086064 - MER89 LTR ERV1 -27 532 1 1590 146 0 57 chr10 98230971 98231002 -42085763 - MER57A LTR ERV1 -10 393 362 2158 136 0 3 chr10 98231002 98231312 -42085453 + AluJb SINE Alu 1 309 -3 1590 146 0 57 chr10 98231312 98231491 -42085274 - MER57A LTR ERV1 -41 362 200 2992 189 61 35 chr10 98231491 98232200 -42084565 - LTR8A LTR ERV1 0 727 1 1590 146 0 57 chr10 98232200 98232269 -42084496 - MER57A LTR ERV1 -203 200 129 3116 130 79 49 chr10 98232270 98232481 -42084284 - MER39B LTR ERV1 -41 612 409 2796 173 77 48 chr10 98232481 98233186 -42083579 - LTR8A LTR ERV1 -2 725 1 3116 130 79 49 chr10 98233186 98233323 -42083442 - MER39B LTR ERV1 -244 409 278 2172 127 3 0 chr10 98233323 98233631 -42083134 - AluSx SINE Alu -3 309 1 3116 130 79 49 chr10 98233631 98233811 -42082954 - MER39B LTR ERV1 -375 278 61 1822 184 0 3 chr10 98233811 98234115 -42082650 + AluJb SINE Alu 1 303 -9 3116 130 79 49 chr10 98234115 98234178 -42082587 - MER39B LTR ERV1 -592 61 1 850 96 0 0 chr10 98234178 98234288 -42082477 - MER57A LTR ERV1 -286 117 8 1923 215 102 76 chr10 98234392 98235159 -42081606 - LTR1B LTR ERV1 -39 787 1 1045 161 76 167 chr10 98236618 98236738 -42080027 + MER34B LTR ERV1 5 134 -431 2226 155 55 33 chr10 98236738 98237046 -42079719 - LOR1b LTR ERV1 0 461 161 1422 198 0 80 chr10 98237046 98237385 -42079380 - AluJb SINE Alu 0 312 1 2226 155 55 33 chr10 98237385 98237450 -42079315 - LOR1b LTR ERV1 -300 161 99 2369 101 0 0 chr10 98237450 98237748 -42079017 + AluSx SINE Alu 1 298 -14 2226 155 55 33 chr10 98237748 98237824 -42078941 - LOR1b LTR ERV1 -362 99 1 1045 161 76 167 chr10 98237824 98238032 -42078733 + MER34B LTR ERV1 134 359 -206 1839 161 0 39 chr10 98238032 98238337 -42078428 - AluJo SINE Alu -19 293 1 1045 161 76 167 chr10 98238337 98238434 -42078331 + MER34B LTR ERV1 359 360 -205 1981 104 49 16 chr10 98238434 98238741 -42078024 - L1PA10 LINE L1 0 6168 5852 1045 161 76 167 chr10 98238741 98238930 -42077835 + MER34B LTR ERV1 360 565 0 1151 177 4 30 chr10 98238985 98239222 -42077543 - AluJo SINE Alu -19 293 63 4257 110 163 80 chr10 98239304 98240724 -42076041 - pTR5 LTR ERV1 0 2438 743 743 222 118 106 chr10 98240851 98241028 -42075737 - MER34C LTR ERV1 -3 539 365 3343 156 70 7 chr10 98241028 98241613 -42075152 + LTR26E LTR ERV1 1 622 0 743 222 118 106 chr10 98241613 98241974 -42074791 - MER34C LTR ERV1 -177 365 1 1387 154 96 0 chr10 98242059 98242299 -42074466 + MER34C LTR ERV1 1 263 -322 887 131 0 15 chr10 98242329 98242466 -42074299 - FLAM_C SINE Alu 0 143 9 1271 166 134 52 chr10 98242473 98242780 -42073985 + MER34C LTR ERV1 254 585 0 2366 152 60 79 chr10 98243263 98243797 -42072968 - MER74A LTR ERVL 0 558 35 573 186 43 106 chr10 98243797 98243985 -42072780 + AluJo SINE Alu 122 297 -15 441 0 0 0 chr10 98243990 98244039 -42072726 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr10 98244602 98244624 -42072141 + AT_rich Low_complexity Low_complexity 1 22 0 401 265 12 90 chr10 98245009 98245052 -42071713 - MER5B DNA MER1_type 0 178 133 2383 59 7 23 chr10 98245052 98245359 -42071406 - AluY SINE Alu -9 302 1 401 265 12 90 chr10 98245359 98245481 -42071284 - MER5B DNA MER1_type -45 133 26 2532 157 123 30 chr10 98245514 98246018 -42070747 + MLT2B3 LTR ERVL 1 551 -3 264 271 161 8 chr10 98246431 98246549 -42070216 - MIR SINE MIR -10 252 117 378 185 0 0 chr10 98246558 98246623 -42070142 - MER92C LTR ERV1 0 554 490 1952 148 0 3 chr10 98246625 98246939 -42069826 - AluJb SINE Alu 0 313 1 465 257 59 72 chr10 98246970 98247192 -42069573 - MER92C LTR ERV1 -335 219 1 354 192 14 0 chr10 98247192 98247265 -42069500 - MIR SINE MIR -150 112 39 1004 286 103 21 chr10 98247909 98248439 -42068326 - L2 LINE L2 -6 3307 2737 180 0 0 0 chr10 98248783 98248803 -42067962 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 844 286 29 0 chr10 98248926 98249167 -42067598 - MIR SINE MIR -3 259 12 420 20 0 0 chr10 98249170 98249219 -42067546 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 25 31 0 0 chr10 98249281 98249313 -42067452 + AT_rich Low_complexity Low_complexity 1 32 0 476 253 103 79 chr10 98250410 98250504 -42066261 + L2 LINE L2 3015 3105 -208 2217 156 43 28 chr10 98250504 98250790 -42065975 + MSTA LTR MaLR 1 296 -132 2192 87 3 7 chr10 98250790 98251076 -42065689 + AluY SINE Alu 22 306 -5 2217 156 43 28 chr10 98251076 98251211 -42065554 + MSTA LTR MaLR 296 428 0 9210 165 44 7 chr10 98251211 98252803 -42063962 + MSTA-int LTR MaLR 1 1651 0 2711 128 39 5 chr10 98252803 98253217 -42063548 + MSTA LTR MaLR 1 428 0 476 253 103 79 chr10 98253217 98253412 -42063353 + L2 LINE L2 3104 3313 0 1640 181 48 0 chr10 98254141 98254399 -42062366 + AluJo SINE Alu 1 276 -36 662 34 11 0 chr10 98254399 98254488 -42062277 + (GA)n Simple_repeat Simple_repeat 1 90 0 1640 181 48 0 chr10 98254488 98254521 -42062244 + AluJo SINE Alu 276 306 -6 754 264 38 29 chr10 98254839 98255154 -42061611 - L2 LINE L2 0 3313 2996 2416 106 46 3 chr10 98255797 98256146 -42060619 + THE1B LTR MaLR 1 364 0 551 270 39 17 chr10 98256568 98256746 -42060019 - MER5A DNA MER1_type -6 183 2 508 148 34 0 chr10 98256896 98256984 -42059781 + MER53 DNA DNA 95 185 -4 992 301 113 0 chr10 98257013 98257392 -42059373 - LTR16A LTR ERVL 0 450 29 1871 137 7 38 chr10 98257418 98257710 -42059055 + AluSx SINE Alu 1 283 -29 192 77 0 0 chr10 98257710 98257736 -42059029 + (CA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 98258414 98258437 -42058328 + AT_rich Low_complexity Low_complexity 1 23 0 252 86 0 0 chr10 98258619 98258654 -42058111 + (CA)n Simple_repeat Simple_repeat 1 35 0 222 37 0 0 chr10 98258654 98258681 -42058084 + (GA)n Simple_repeat Simple_repeat 1 27 0 608 223 68 97 chr10 98259028 98259337 -42057428 + LTR16B LTR ERVL 4 303 -161 2188 85 34 7 chr10 98259682 98259976 -42056789 - AluSg SINE Alu -8 302 1 403 330 82 15 chr10 98260155 98260361 -42056404 + L2 LINE L2 2587 2806 -508 462 36 0 0 chr10 98260537 98260593 -42056172 + (TA)n Simple_repeat Simple_repeat 1 56 0 2158 127 7 0 chr10 98260721 98261028 -42055737 - AluSx SINE Alu -3 309 1 25 51 0 0 chr10 98261073 98261112 -42055653 + AT_rich Low_complexity Low_complexity 1 39 0 2162 118 3 0 chr10 98261112 98261399 -42055366 - AluSx SINE Alu -24 288 1 3683 211 55 18 chr10 98261399 98262362 -42054403 - L1ME1 LINE L1 -55 6111 5065 2090 142 3 3 chr10 98262362 98262665 -42054100 - AluJb SINE Alu -9 303 1 3683 211 55 18 chr10 98262665 98263299 -42053466 - L1ME1 LINE L1 -1101 5065 4456 349 264 7 90 chr10 98263299 98263443 -42053322 - HAL1b LINE L1 -1182 166 35 2288 114 3 0 chr10 98263732 98264038 -42052727 - AluSx SINE Alu -5 307 1 319 264 88 32 chr10 98264235 98264360 -42052405 - HAL1 LINE L1 -1448 1059 928 2207 176 79 137 chr10 98264641 98265413 -42051352 + LTR8A LTR ERV1 1 727 0 1838 175 125 8 chr10 98265926 98266309 -42050456 + MSTA LTR MaLR 1 428 0 581 233 108 42 chr10 98266696 98266984 -42049781 + L1ME4a LINE L1 5578 5884 -237 419 233 26 52 chr10 98267508 98267624 -42049141 - L2 LINE L2 -16 3256 3144 967 234 19 19 chr10 98267640 98267849 -42048916 - MER58A DNA MER1_type -15 209 1 605 322 48 24 chr10 98268037 98268377 -42048388 - L2 LINE L2 -243 3029 2676 269 235 0 0 chr10 98269001 98269052 -42047713 + polypyrimidine Low_complexity Low_complexity 4 54 0 225 94 0 0 chr10 98269052 98269084 -42047681 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 465 150 12 0 chr10 98269205 98269285 -42047480 - MER53 DNA DNA -108 81 1 448 213 0 0 chr10 98271657 98271737 -42045028 + polypyrimidine Low_complexity Low_complexity 1 80 0 497 75 12 75 chr10 98271737 98271897 -42044868 + (TTCCC)n Simple_repeat Simple_repeat 5 154 0 1556 148 4 39 chr10 98272811 98273067 -42043698 - AluSx SINE Alu -35 277 31 21 71 0 0 chr10 98273255 98273297 -42043468 + AT_rich Low_complexity Low_complexity 1 42 0 2316 107 0 3 chr10 98274039 98274347 -42042418 - AluSx SINE Alu -5 307 1 2507 55 0 3 chr10 98276146 98276437 -42040328 - AluY SINE Alu -21 290 1 1457 169 14 14 chr10 98276992 98277271 -42039494 - L1MB3 LINE L1 -9 6174 5896 902 125 7 0 chr10 98278138 98278282 -42038483 - L1MA8 LINE L1 -2 6289 6145 700 130 49 0 chr10 98278808 98278931 -42037834 - L1MA8 LINE L1 -18 6273 6145 2237 120 7 0 chr10 98279010 98279311 -42037454 + AluSx SINE Alu 1 303 -9 671 147 0 0 chr10 98279211 98279313 -42037452 + AluSg/x SINE Alu 204 305 -7 297 189 263 0 chr10 98279543 98279638 -42037127 + L2 LINE L2 3193 3312 -1 2456 83 0 0 chr10 98280439 98280740 -42036025 - AluY SINE Alu -10 301 1 187 324 20 39 chr10 98281733 98281835 -42034930 + L2 LINE L2 2424 2523 -791 181 321 23 46 chr10 98281964 98282095 -42034670 - L2 LINE L2 0 3272 3145 278 237 228 35 chr10 98282312 98282426 -42034339 - L2 LINE L2 0 3272 3137 273 232 91 20 chr10 98282901 98283000 -42033765 + MIR SINE MIR 121 226 -36 323 198 81 27 chr10 98283973 98284084 -42032681 - MER103 DNA DNA -43 123 7 470 239 107 19 chr10 98284410 98284569 -42032196 + Charlie8 DNA MER1_type 93 265 -2152 2231 112 3 0 chr10 98285064 98285359 -42031406 + AluSg SINE Alu 4 299 -11 948 232 52 8 chr10 98285444 98285694 -42031071 + MIR SINE MIR 1 261 -1 766 238 92 90 chr10 98285744 98286189 -42030576 + MLT1H LTR MaLR 104 549 0 282 343 97 5 chr10 98286195 98286402 -42030363 - MIR SINE MIR -31 231 6 274 191 206 85 chr10 98286776 98286917 -42029848 - L2 LINE L2 0 3313 3156 290 227 86 23 chr10 98287670 98287798 -42028967 - MIR SINE MIR 0 262 127 1142 84 0 0 chr10 98287803 98287945 -42028820 + AluY SINE Alu 152 293 -18 483 186 97 28 chr10 98288104 98288249 -42028516 + L2 LINE L2 3159 3313 0 267 274 11 32 chr10 98288816 98288911 -42027854 + MIR3 SINE MIR 108 200 -8 1918 138 7 0 chr10 98288937 98289220 -42027545 - AluJo SINE Alu -1 311 27 1100 177 6 0 chr10 98290402 98290583 -42026182 + MER5A DNA MER1_type 4 185 -4 220 321 53 23 chr10 98290660 98290791 -42025974 + L2 LINE L2 3177 3311 -2 491 306 54 89 chr10 98293468 98293818 -42022947 - L2 LINE L2 0 3272 2935 546 224 0 0 chr10 98294697 98294813 -42021952 - MIR SINE MIR -6 256 141 206 323 16 0 chr10 98294844 98294906 -42021859 - MIR SINE MIR -187 75 13 271 264 107 14 chr10 98295390 98295530 -42021235 - MIR3 SINE MIR -7 201 49 1665 104 165 0 chr10 98295568 98295828 -42020937 - AluSq SINE Alu 0 303 1 296 64 21 0 chr10 98297079 98297126 -42019639 + (CA)n Simple_repeat Simple_repeat 2 49 0 2359 118 19 27 chr10 98297505 98297871 -42018894 - THE1B LTR MaLR -1 363 1 2282 116 0 0 chr10 98299574 98299867 -42016898 - AluSx SINE Alu -19 293 1 7491 33 8 11 chr10 98300533 98301519 -42015246 + L1PA5 LINE L1 5171 6153 -1 431 209 209 14 chr10 98302600 98302748 -42014017 + MIR SINE MIR 76 252 -10 1068 177 73 32 chr10 98303001 98303249 -42013516 - L1MB8 LINE L1 0 6178 5921 285 103 103 17 chr10 98303311 98303369 -42013396 + L2 LINE L2 3246 3308 -5 483 189 53 65 chr10 98303534 98303703 -42013062 - MER5B DNA MER1_type 0 178 12 432 162 0 0 chr10 98303905 98303979 -42012786 + MER116 DNA Mariner 7 80 0 30 27 0 0 chr10 98304074 98304111 -42012654 + AT_rich Low_complexity Low_complexity 1 37 0 247 244 146 12 chr10 98304505 98304587 -42012178 + L1ME LINE L1 5567 5659 -462 806 157 35 58 chr10 98305230 98305402 -42011363 + MER20 DNA MER1_type 1 168 -51 2616 68 0 0 chr10 98305917 98306228 -42010537 + AluY SINE Alu 1 311 0 1766 125 0 0 chr10 98306657 98306889 -42009876 - AluSx SINE Alu -19 293 62 207 333 11 11 chr10 98307672 98307765 -42009000 - MIR SINE MIR -7 255 163 22 0 0 0 chr10 98308357 98308379 -42008386 + AT_rich Low_complexity Low_complexity 1 22 0 300 53 0 0 chr10 98309324 98309362 -42007403 + (GA)n Simple_repeat Simple_repeat 1 38 0 2481 93 0 0 chr10 98309907 98310217 -42006548 - AluSx SINE Alu -2 310 1 4238 174 35 13 chr10 98310269 98311099 -42005666 + L1MB7 LINE L1 5328 6175 -9 698 188 39 0 chr10 98311285 98311413 -42005352 - AluJb SINE Alu -178 134 2 351 297 88 7 chr10 98311834 98311982 -42004783 - MIR SINE MIR -82 180 21 320 342 18 0 chr10 98311982 98312093 -42004672 - MIR3 SINE MIR -31 177 65 685 206 91 23 chr10 98312992 98313167 -42003598 - MIR SINE MIR -55 207 21 180 0 0 0 chr10 98313220 98313240 -42003525 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 814 187 15 0 chr10 98313246 98313380 -42003385 - FRAM SINE Alu -36 140 5 191 272 78 68 chr10 98313576 98313679 -42003086 + L2 LINE L2 2976 3079 -193 484 283 16 31 chr10 98315057 98315248 -42001517 + MIR SINE MIR 20 207 -55 270 0 0 0 chr10 98315705 98315735 -42001030 + (CA)n Simple_repeat Simple_repeat 1 30 0 209 286 0 0 chr10 98315745 98315801 -42000964 + MIR SINE MIR 58 113 -149 302 299 86 8 chr10 98315852 98315969 -42000796 + MIR SINE MIR 105 230 -32 673 342 86 27 chr10 98316159 98316603 -42000162 + L3 LINE CR1 481 950 -627 211 333 103 31 chr10 98316811 98317006 -41999759 + L3 LINE CR1 1334 1542 -35 270 285 120 55 chr10 98317171 98317371 -41999394 - MIR SINE MIR -5 257 45 1984 134 14 7 chr10 98317371 98317663 -41999102 - AluSq SINE Alu -16 297 4 212 340 29 10 chr10 98317918 98318021 -41998744 - L2 LINE L2 -6 3307 3203 286 323 37 32 chr10 98318060 98318249 -41998516 - L2 LINE L2 -289 3024 2835 2371 96 0 0 chr10 98318254 98318556 -41998209 + AluY SINE Alu 1 302 -9 1147 116 0 35 chr10 98318556 98318729 -41998036 + AluSg/x SINE Alu 134 300 -12 385 245 41 0 chr10 98318740 98318838 -41997927 + MER103 DNA DNA 65 166 0 2410 78 0 3 chr10 98319623 98319917 -41996848 - AluSx SINE Alu -19 293 1 2299 116 3 32 chr10 98321660 98322004 -41994761 + MER1B DNA MER1_type 4 337 0 547 261 147 64 chr10 98322473 98322714 -41994051 - L1ME4a LINE L1 -3 6118 5898 1466 170 24 28 chr10 98322714 98323003 -41993762 + AluJo SINE Alu 1 288 -24 547 261 147 64 chr10 98323003 98323014 -41993751 - L1ME4a LINE L1 -223 5898 5889 1918 127 7 7 chr10 98323014 98323290 -41993475 + AluSx SINE Alu 16 291 -21 547 261 147 64 chr10 98323290 98323473 -41993292 - L1ME4a LINE L1 -232 5889 5646 920 270 13 4 chr10 98324028 98324261 -41992504 + MLT1K LTR MaLR 1 235 -307 270 0 0 0 chr10 98324369 98324399 -41992366 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2240 113 10 0 chr10 98324970 98325279 -41991486 - AluSp SINE Alu -1 312 1 256 267 17 0 chr10 98325374 98325434 -41991331 + (CA)n Simple_repeat Simple_repeat 1 61 0 338 311 49 44 chr10 98325445 98325628 -41991137 + MER5A DNA MER1_type 1 184 -5 416 328 67 13 chr10 98325799 98326037 -41990728 + MIR SINE MIR 2 252 -10 387 0 0 0 chr10 98326314 98326357 -41990408 + (TA)n Simple_repeat Simple_repeat 2 44 0 580 171 171 0 chr10 98326376 98326487 -41990278 - FLAM_A SINE Alu -3 130 1 402 115 0 0 chr10 98326495 98326556 -41990209 + (TG)n Simple_repeat Simple_repeat 2 62 0 1063 294 88 21 chr10 98327134 98327508 -41989257 + MLT1K LTR MaLR 190 588 0 332 245 115 36 chr10 98327531 98327670 -41989095 - L2 LINE L2 -6 3307 3158 40 94 0 0 chr10 98327696 98327813 -41988952 + AT_rich Low_complexity Low_complexity 1 117 0 23 54 0 0 chr10 98327836 98327873 -41988892 + AT_rich Low_complexity Low_complexity 1 37 0 4036 138 149 126 chr10 98328384 98328912 -41987853 + L1MC3 LINE L1 6543 7057 -728 289 328 0 30 chr10 98328912 98329043 -41987722 + MLT1F1 LTR MaLR 21 147 -420 4036 138 149 126 chr10 98329043 98329575 -41987190 + L1MC3 LINE L1 7057 7761 -24 214 143 71 129 chr10 98329610 98329680 -41987085 + MIR SINE MIR 119 184 -78 2348 78 7 7 chr10 98329824 98330118 -41986647 - AluSx SINE Alu -18 294 1 577 266 78 26 chr10 98330498 98330690 -41986075 - MIR SINE MIR -14 248 47 185 293 181 54 chr10 98331961 98332166 -41984599 - MIR SINE MIR -1 261 31 262 291 39 39 chr10 98332867 98332970 -41983795 + MIR SINE MIR 41 143 -65 230 281 0 16 chr10 98333212 98333276 -41983489 + GA-rich Low_complexity Low_complexity 2 64 0 2047 125 3 7 chr10 98333352 98333648 -41983117 + AluSg1 SINE Alu 1 295 -14 357 125 0 0 chr10 98333655 98333711 -41983054 + (GGAA)n Simple_repeat Simple_repeat 4 59 0 333 298 71 21 chr10 98333917 98334058 -41982707 + L2 LINE L2 2558 2705 -609 830 184 0 0 chr10 98334058 98334183 -41982582 - FLAM_A SINE Alu -8 125 1 2401 83 3 0 chr10 98334210 98334511 -41982254 + AluSq SINE Alu 1 302 -11 584 281 127 89 chr10 98334514 98334814 -41981951 - L2 LINE L2 -475 2839 2511 2598 153 39 5 chr10 98334814 98335226 -41981539 + MSTB LTR MaLR 1 426 0 584 281 127 89 chr10 98335226 98335430 -41981335 - L2 LINE L2 -803 2511 2316 421 270 43 9 chr10 98335431 98335546 -41981219 + L2 LINE L2 3190 3308 -5 224 167 0 19 chr10 98336203 98336257 -41980508 + GA-rich Low_complexity Low_complexity 4 56 0 1917 155 10 13 chr10 98336267 98336577 -41980188 + AluSx SINE Alu 1 309 -3 209 233 0 0 chr10 98336720 98336763 -41980002 + A-rich Low_complexity Low_complexity 1 43 0 1447 208 7 31 chr10 98337062 98337356 -41979409 - AluJo SINE Alu -25 287 1 2355 67 0 13 chr10 98337366 98337692 -41979073 - AluY SINE Alu 0 311 1 287 330 27 18 chr10 98337695 98337807 -41978958 + MER5B DNA MER1_type 41 153 -25 1245 179 113 58 chr10 98337991 98338337 -41978428 - MLT1A1 LTR MaLR 0 365 1 428 275 113 21 chr10 98338834 98338976 -41977789 + MIR SINE MIR 3 157 -105 473 226 51 113 chr10 98339087 98339177 -41977588 - MIR SINE MIR -49 213 140 1856 147 24 0 chr10 98339177 98339470 -41977295 + AluJb SINE Alu 1 300 -12 473 226 51 113 chr10 98339470 98339574 -41977191 - MIR SINE MIR -122 140 31 207 0 0 0 chr10 98340976 98340999 -41975766 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 195 283 261 0 chr10 98341203 98341295 -41975470 + MIR SINE MIR 8 119 -89 4102 197 51 15 chr10 98341312 98342181 -41974584 - L1MC4a LINE L1 0 7808 6909 237 271 0 73 chr10 98343047 98343143 -41973622 - MER5A DNA MER1_type -72 117 29 676 308 51 14 chr10 98343147 98343361 -41973404 + MIR SINE MIR 2 223 -39 1603 181 13 13 chr10 98343528 98343827 -41972938 - AluJo SINE Alu -13 299 1 215 146 24 0 chr10 98345385 98345426 -41971339 + (TGG)n Simple_repeat Simple_repeat 2 43 0 21 0 0 0 chr10 98347354 98347375 -41969390 + AT_rich Low_complexity Low_complexity 1 21 0 1265 121 0 6 chr10 98348384 98348558 -41968207 + AluSq SINE Alu 1 173 -140 2128 62 93 10 chr10 98348563 98348852 -41967913 + L1PA4 LINE L1 5840 6152 -3 322 296 50 45 chr10 98348863 98349042 -41967723 - L2 LINE L2 -26 3287 3108 2009 104 54 4 chr10 98349086 98349364 -41967401 - AluSx SINE Alu -20 292 1 503 307 72 19 chr10 98349492 98349728 -41967037 - MIR SINE MIR -12 250 5 270 0 0 0 chr10 98349758 98349788 -41966977 + (CA)n Simple_repeat Simple_repeat 2 31 0 2077 113 7 0 chr10 98350362 98350653 -41966112 + AluSx SINE Alu 1 293 -19 611 121 0 0 chr10 98350806 98350889 -41965876 + L1P LINE L1 1 83 -6063 36475 52 17 11 chr10 98350889 98355601 -41961164 + L1P LINE L1 297 5035 -1111 225 0 0 0 chr10 98355720 98355745 -41961020 + (A)n Simple_repeat Simple_repeat 1 25 0 701 268 102 45 chr10 98355966 98356437 -41960328 + L1MC4a LINE L1 5491 5988 -133 974 244 50 0 chr10 98356545 98356783 -41959982 + MIR SINE MIR 10 259 -3 356 240 10 62 chr10 98356958 98357054 -41959711 - L2 LINE L2 -1 3312 3222 442 289 50 13 chr10 98357404 98357563 -41959202 + MIR3 SINE MIR 37 201 -7 413 280 233 0 chr10 98358304 98358493 -41958272 + MIR SINE MIR 26 258 -4 215 280 20 0 chr10 98358627 98358677 -41958088 + L3b LINE CR1 1279 1329 -254 680 70 0 0 chr10 98358997 98359083 -41957682 - L1PA7 LINE L1 -5 6149 6064 566 251 180 33 chr10 98359309 98359520 -41957245 + MIR SINE MIR 7 248 -14 277 276 31 47 chr10 98359954 98360081 -41956684 + MIR SINE MIR 21 145 -63 257 261 189 7 chr10 98360090 98360243 -41956522 + L1MC/D LINE L1 5321 5501 -741 238 311 47 19 chr10 98360419 98360525 -41956240 + MIR SINE MIR 135 243 -19 184 263 106 84 chr10 98361355 98361534 -41955231 - MIR3 SINE MIR -23 185 3 191 275 242 27 chr10 98361650 98361799 -41954966 + L2 LINE L2 2915 3095 -177 318 269 51 65 chr10 98362465 98362652 -41954113 - MIR SINE MIR -63 199 18 353 320 225 10 chr10 98363136 98363336 -41953429 + MIR SINE MIR 1 243 -19 316 333 35 14 chr10 98363406 98363550 -41953215 - MIR SINE MIR -79 183 37 930 228 67 72 chr10 98363951 98364412 -41952353 + L1MC5 LINE L1 7453 7911 -50 185 310 157 35 chr10 98364639 98364900 -41951865 + L2 LINE L2 2350 2642 -672 368 248 77 26 chr10 98365122 98365239 -41951526 + L2 LINE L2 3191 3313 0 315 333 38 0 chr10 98365503 98365635 -41951130 + MIR3 SINE MIR 57 193 -15 2556 120 27 3 chr10 98365989 98366355 -41950410 + THE1C LTR MaLR 1 375 0 264 313 199 17 chr10 98366791 98366967 -41949798 + MIR SINE MIR 20 227 -35 1396 153 0 0 chr10 98367079 98367281 -41949484 + AluJb SINE Alu 85 286 -26 252 0 0 0 chr10 98367303 98367331 -41949434 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 207 298 90 53 chr10 98368003 98368191 -41948574 + L2 LINE L2 2910 3104 -168 260 196 59 0 chr10 98368223 98368274 -41948491 + MER20 DNA MER1_type 1 54 -165 243 238 111 0 chr10 98368335 98368398 -41948367 + L2 LINE L2 3178 3247 -25 2913 3 0 0 chr10 98368411 98368721 -41948044 + AluYa5 SINE Alu 1 310 -1 219 342 103 0 chr10 98370210 98370327 -41946438 + MIR SINE MIR 131 259 -3 253 275 14 0 chr10 98371199 98371268 -41945497 + MER5A DNA MER1_type 118 187 -2 23 0 0 0 chr10 98371589 98371612 -41945153 + AT_rich Low_complexity Low_complexity 1 23 0 706 241 19 0 chr10 98374355 98374513 -41942252 - MIR SINE MIR -1 261 101 318 293 80 33 chr10 98374818 98374909 -41941856 + MIR3 SINE MIR 42 144 -64 1486 188 23 33 chr10 98374909 98375212 -41941553 + AluJo SINE Alu 1 300 -12 318 293 80 33 chr10 98375212 98375270 -41941495 + MIR3 SINE MIR 144 198 -10 2141 142 0 6 chr10 98375276 98375587 -41941178 - AluJb SINE Alu -3 309 1 496 330 26 10 chr10 98375702 98375896 -41940869 - MIR SINE MIR -38 224 28 1028 244 33 12 chr10 98376212 98376454 -41940311 - MARNA DNA Mariner -208 378 132 345 241 46 11 chr10 98376396 98376483 -41940282 + MARNA DNA Mariner 397 486 -100 * 274 303 13 0 chr10 98376600 98376676 -41940089 + L2 LINE L2 3231 3307 -6 347 258 94 23 chr10 98377464 98377592 -41939173 + MIR SINE MIR 126 262 0 199 341 125 11 chr10 98378132 98378308 -41938457 - MIR3 SINE MIR -11 197 2 23 33 0 0 chr10 98378406 98378436 -41938329 + AT_rich Low_complexity Low_complexity 1 30 0 296 300 36 0 chr10 98378580 98378690 -41938075 - MIR SINE MIR -2 260 147 539 262 43 0 chr10 98379072 98379235 -41937530 + MIR SINE MIR 6 183 -58 731 220 17 10 chr10 98379726 98379954 -41936811 - L1 LINE L1 -1625 4521 4297 409 183 157 9 chr10 98379990 98380105 -41936660 - L2 LINE L2 0 3272 3141 472 238 115 51 chr10 98380801 98381015 -41935750 + MIR SINE MIR 3 231 -31 354 261 0 0 chr10 98381012 98381104 -41935661 + L1M4 LINE L1 4103 4194 -1952 * 314 271 85 33 chr10 98381135 98381607 -41935158 + L1M4 LINE L1 4955 5458 -726 321 262 124 21 chr10 98382272 98382417 -41934348 - L2 LINE L2 -254 3059 2900 22 56 0 0 chr10 98383006 98383042 -41933723 + AT_rich Low_complexity Low_complexity 1 36 0 1629 52 5 0 chr10 98383042 98383236 -41933529 - L1PA7 LINE L1 0 6154 5960 198 301 164 44 chr10 98383664 98383847 -41932918 + MIR SINE MIR 55 259 -3 2206 100 7 0 chr10 98383870 98384159 -41932606 + AluSg1 SINE Alu 1 291 -18 787 237 117 23 chr10 98384467 98384733 -41932032 - MER46C DNA MER2_type -42 296 6 1757 150 3 27 chr10 98384863 98385156 -41931609 - AluJo SINE Alu -7 305 20 1340 156 24 5 chr10 98385270 98385482 -41931283 - MER20 DNA MER1_type -1 218 3 599 287 63 20 chr10 98386473 98386498 -41930267 + MIR SINE MIR 4 26 -236 384 59 0 0 chr10 98386498 98386549 -41930216 + (CA)n Simple_repeat Simple_repeat 2 52 0 599 287 63 20 chr10 98386549 98386771 -41929994 + MIR SINE MIR 26 260 -2 192 349 74 65 chr10 98387313 98387637 -41929128 - L2 LINE L2 -14 3258 2932 375 241 45 150 chr10 98388096 98388174 -41928591 + MER117 DNA MER1_type 1 86 -111 1663 129 51 44 chr10 98388174 98388468 -41928297 + AluJo SINE Alu 13 308 -4 375 241 45 150 chr10 98388468 98388517 -41928248 + MER117 DNA MER1_type 86 139 -58 2213 170 110 5 chr10 98388517 98388934 -41927831 + LOR1b LTR ERV1 1 461 0 375 241 45 150 chr10 98388934 98389025 -41927740 + MER117 DNA MER1_type 139 197 0 242 240 0 0 chr10 98390045 98390095 -41926670 - Charlie8 DNA MER1_type -4 2413 2364 2259 92 0 3 chr10 98390096 98390388 -41926377 + AluY SINE Alu 21 311 0 309 245 128 0 chr10 98390543 98390637 -41926128 - MIR SINE MIR -113 149 44 1873 155 7 7 chr10 98390854 98391163 -41925602 + AluJo SINE Alu 1 309 -3 411 281 66 38 chr10 98391517 98391700 -41925065 + MIR SINE MIR 41 232 -30 282 56 0 0 chr10 98393003 98393039 -41923726 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1904 136 0 44 chr10 98393041 98393335 -41923430 - AluSx SINE Alu -31 281 1 241 320 103 21 chr10 98393535 98393632 -41923133 + MIR SINE MIR 87 192 -16 * 349 303 28 90 chr10 98393626 98393804 -41922961 - L2 LINE L2 -2 3270 3104 848 207 108 10 chr10 98393839 98394034 -41922731 + MIR SINE MIR 40 257 -5 1254 197 166 0 chr10 98394034 98394329 -41922436 + MER2 DNA MER2_type 1 344 0 239 342 59 37 chr10 98394352 98394539 -41922226 - L2 LINE L2 -166 3106 2916 724 237 182 48 chr10 98394704 98395159 -41921606 + LTR33 LTR ERVL 3 518 -3 252 317 19 29 chr10 98395179 98395283 -41921482 - L2 LINE L2 -573 2741 2639 258 313 26 43 chr10 98395303 98395418 -41921347 - MER5A DNA MER1_type -34 155 43 202 390 84 19 chr10 98395642 98396011 -41920754 - L2 LINE L2 -1869 1445 1053 337 278 0 0 chr10 98396299 98396389 -41920376 - L2 LINE L2 -4 3309 3220 242 387 40 32 chr10 98396960 98397084 -41919681 - L2 LINE L2 -15 3257 3133 464 253 123 19 chr10 98397905 98398067 -41918698 - MIR SINE MIR -36 226 48 1821 156 35 0 chr10 98398092 98398380 -41918385 - AluJb SINE Alu -11 301 4 337 315 61 90 chr10 98398608 98399065 -41917700 + L2 LINE L2 2810 3253 -19 200 94 0 31 chr10 98399182 98399214 -41917551 - L2 LINE L2 -22 3291 3261 210 105 0 0 chr10 98400035 98400073 -41916692 + (A)n Simple_repeat Simple_repeat 1 38 0 321 222 37 65 chr10 98400083 98400191 -41916574 - MIR SINE MIR -3 259 155 857 197 0 0 chr10 98400227 98400374 -41916391 + FAM SINE Alu 1 43 -6 246 376 104 0 chr10 98400387 98400512 -41916253 - MIR SINE MIR -119 143 6 919 251 38 8 chr10 98400518 98400753 -41916012 - MIR SINE MIR 0 262 21 779 144 0 50 chr10 98400936 98401075 -41915690 - FLAM_C SINE Alu 0 143 12 2144 112 7 20 chr10 98401652 98401955 -41914810 + AluJb SINE Alu 1 299 -13 185 259 188 0 chr10 98402124 98402209 -41914556 - MIR SINE MIR -142 120 20 302 319 28 55 chr10 98402321 98402503 -41914262 - MIR SINE MIR -13 249 73 248 309 57 32 chr10 98403857 98403980 -41912785 - MIR3 SINE MIR -1 207 82 1029 174 83 9 chr10 98404765 98404983 -41911782 + MLT1E3 LTR MaLR 391 624 0 556 251 128 78 chr10 98405035 98405384 -41911381 + L1ME4a LINE L1 5538 5927 -194 3419 170 20 25 chr10 98405384 98406025 -41910740 + L1MB7 LINE L1 5542 6179 -5 556 251 128 78 chr10 98406025 98406228 -41910537 + L1ME4a LINE L1 5927 6118 -3 513 306 21 0 chr10 98406881 98407025 -41909740 - MIR SINE MIR -86 176 30 2038 137 0 22 chr10 98407033 98407348 -41909417 + AluSx SINE Alu 1 308 -4 29 0 0 0 chr10 98407390 98407419 -41909346 + AT_rich Low_complexity Low_complexity 1 29 0 190 213 66 16 chr10 98407432 98407493 -41909272 - MIR SINE MIR -65 197 134 2478 86 0 0 chr10 98407616 98407920 -41908845 - AluY SINE Alu -7 304 1 1012 255 71 19 chr10 98408109 98408419 -41908346 - MLT1J2 LTR MaLR -123 327 2 241 285 39 39 chr10 98409025 98409155 -41907610 - L2 LINE L2 -7 3265 3136 566 237 174 36 chr10 98409323 98409542 -41907223 - MIR SINE MIR -6 256 8 198 167 0 0 chr10 98409991 98410027 -41906738 + A-rich Low_complexity Low_complexity 1 36 0 197 371 60 17 chr10 98410533 98410649 -41906116 - L2 LINE L2 -2 3270 3150 348 84 7 0 chr10 98411344 98411402 -41905363 - Alu SINE Alu 0 301 250 26 50 0 0 chr10 98411920 98411960 -41904805 + AT_rich Low_complexity Low_complexity 1 40 0 2084 143 21 47 chr10 98412131 98412515 -41904250 + THE1C LTR MaLR 1 374 -1 1617 240 48 14 chr10 98412590 98413032 -41903733 + L1ME3A LINE L1 5706 6162 -8 243 79 0 0 chr10 98413037 98413075 -41903690 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 359 264 69 33 chr10 98413250 98413585 -41903180 + L1ME3A LINE L1 4916 5271 -875 1559 187 22 7 chr10 98413587 98413865 -41902900 + AluJo SINE Alu 1 282 -30 219 69 0 0 chr10 98413865 98413894 -41902871 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 363 151 32 0 chr10 98413893 98413986 -41902779 + (TA)n Simple_repeat Simple_repeat 1 96 0 1494 257 65 40 chr10 98413986 98414668 -41902097 + L1ME3A LINE L1 5256 5954 -216 292 137 130 0 chr10 98414672 98414749 -41902016 - L1MB5 LINE L1 0 6174 6080 572 75 50 0 chr10 98415525 98415605 -41901160 + HY4 scRNA scRNA 1 84 -9 35 78 0 0 chr10 98415608 98415685 -41901080 + AT_rich Low_complexity Low_complexity 1 77 0 527 238 116 37 chr10 98415787 98415951 -41900814 - MIR SINE MIR -76 186 10 535 253 82 16 chr10 98416044 98416226 -41900539 + MIR3 SINE MIR 15 208 0 1246 61 0 0 chr10 98416685 98416832 -41899933 - AluY SINE Alu -164 147 1 362 300 14 24 chr10 98417058 98417187 -41899578 + MIR SINE MIR 12 147 -61 804 195 0 0 chr10 98417216 98417344 -41899421 + AluJb SINE Alu 2 129 -183 1424 190 61 24 chr10 98417361 98417656 -41899109 + AluJo SINE Alu 1 306 -6 294 292 58 50 chr10 98417898 98418018 -41898747 + MER91A DNA MER1_type 9 129 -67 283 273 116 16 chr10 98418322 98418443 -41898322 + MARNA DNA Mariner 428 560 -26 189 315 0 19 chr10 98420161 98420215 -41896550 + MIR SINE MIR 13 65 -197 212 225 0 0 chr10 98420614 98420654 -41896111 + L2 LINE L2 3219 3258 -14 322 258 15 0 chr10 98420701 98420767 -41895998 - MIR SINE MIR -100 108 42 225 289 175 0 chr10 98421477 98421591 -41895174 - L2 LINE L2 -183 3089 2956 1331 216 22 0 chr10 98421591 98421860 -41894905 - MER58B DNA MER1_type 0 341 67 494 235 150 7 chr10 98421971 98422124 -41894641 + MER96 DNA MER1_type 1 175 0 803 183 0 0 chr10 98422396 98422522 -41894243 + FLAM_C SINE Alu 2 127 -6 4820 138 48 38 chr10 98422699 98422965 -41893800 + L1MB8 LINE L1 5227 5489 -689 2187 119 0 13 chr10 98422965 98423268 -41893497 + AluSx SINE Alu 1 299 -13 4820 138 48 38 chr10 98423268 98423948 -41892817 + L1MB8 LINE L1 5489 6178 0 401 309 113 36 chr10 98426468 98426636 -41890129 - MIR SINE MIR -70 192 12 417 246 25 25 chr10 98427833 98427951 -41888814 - MER5B DNA MER1_type 0 178 61 530 328 37 9 chr10 98428120 98428352 -41888413 + MIR SINE MIR 21 257 -5 2269 147 28 8 chr10 98428370 98428723 -41888042 + THE1B LTR MaLR 5 364 0 225 0 0 0 chr10 98428723 98428748 -41888017 + (ATG)n Simple_repeat Simple_repeat 3 27 0 229 338 108 19 chr10 98428850 98429007 -41887758 + L3 LINE CR1 1152 1322 -255 1154 206 4 13 chr10 98429017 98429248 -41887517 + Charlie4a DNA MER1_type 17 245 -263 426 256 56 0 chr10 98429248 98429338 -41887427 + MER81 DNA DNA 1 95 -19 206 232 43 0 chr10 98429341 98429410 -41887355 + (TA)n Simple_repeat Simple_repeat 1 72 0 1001 218 106 50 chr10 98429430 98429733 -41887032 + MER2 DNA MER2_type 1 320 -25 744 247 87 0 chr10 98429745 98429976 -41886789 + Charlie4a DNA MER1_type 251 501 -7 1051 256 34 14 chr10 98432133 98432430 -41884335 + L1MEc LINE L1 248 550 -6057 675 246 15 10 chr10 98432417 98432662 -41884103 + L1MEc LINE L1 1479 1913 -4694 * 326 351 22 22 chr10 98433122 98433307 -41883458 - L1ME4a LINE L1 -94 6027 5843 213 245 0 0 chr10 98433503 98433552 -41883213 + (TTA)n Simple_repeat Simple_repeat 3 51 0 528 200 0 0 chr10 98433554 98433639 -41883126 - AluSc SINE Alu -26 283 199 836 164 7 0 chr10 98433641 98433781 -41882984 - MLT1F1 LTR MaLR -421 146 6 1399 144 40 0 chr10 98433782 98433984 -41882781 - AluJb SINE Alu -102 210 1 2256 183 136 6 chr10 98434033 98434535 -41882230 + MLT1F1 LTR MaLR 1 567 0 514 294 14 0 chr10 98434547 98434693 -41882072 - MIR SINE MIR -114 148 1 2182 107 0 4 chr10 98434780 98435111 -41881654 - AluSc SINE Alu 0 330 1 248 387 9 0 chr10 98435456 98435562 -41881203 - L2 LINE L2 -220 3052 2946 268 318 35 0 chr10 98435605 98435690 -41881075 + MIR SINE MIR 88 175 -87 251 176 0 0 chr10 98436407 98436458 -41880307 + L1M4 LINE L1 4123 4173 -1973 1034 256 5 0 chr10 98436554 98436777 -41879988 + MER58A DNA MER1_type 1 224 0 510 381 44 7 chr10 98436812 98437082 -41879683 + L3 LINE CR1 1213 1492 -85 454 217 78 83 chr10 98437165 98437262 -41879503 - MIR SINE MIR 0 262 165 1401 243 139 13 chr10 98437262 98437714 -41879051 + MLT1J LTR MaLR 2 510 -1 454 217 78 83 chr10 98437714 98437796 -41878969 - MIR SINE MIR -97 165 84 240 250 25 50 chr10 98439994 98440114 -41876651 - L1M4 LINE L1 -1515 4631 4515 234 274 0 0 chr10 98440159 98440261 -41876504 + (TA)n Simple_repeat Simple_repeat 1 102 0 1504 271 52 8 chr10 98440261 98440917 -41875848 - L1M4 LINE L1 -1653 4493 3809 * 2023 211 63 44 chr10 98440905 98441520 -41875245 + L1M4 LINE L1 4645 5278 -868 2001 166 0 3 chr10 98441520 98441833 -41874932 + AluSx SINE Alu 1 312 0 2023 211 63 44 chr10 98441833 98441943 -41874822 + L1M4 LINE L1 5278 5384 -762 * 2804 211 67 39 chr10 98441938 98442899 -41873866 + L1ME2 LINE L1 4908 5916 -248 1198 150 0 19 chr10 98442899 98443112 -41873653 - MER3 DNA MER1_type 0 209 1 2804 211 67 39 chr10 98443112 98443287 -41873478 + L1ME2 LINE L1 5916 6085 -79 383 301 11 0 chr10 98443306 98443399 -41873366 - MER91A DNA MER1_type -91 105 12 309 289 82 0 chr10 98443447 98443544 -41873221 + MIR SINE MIR 45 149 -113 186 235 0 0 chr10 98443552 98443586 -41873179 - MIR SINE MIR -70 192 159 1930 129 87 6 chr10 98446054 98446387 -41870378 + MER46B DNA MER2_type 1 235 -1 29 0 0 0 chr10 98446399 98446428 -41870337 + AT_rich Low_complexity Low_complexity 1 29 0 247 184 20 0 chr10 98446672 98446721 -41870044 - L2 LINE L2 0 3313 3264 448 320 83 22 chr10 98447471 98447652 -41869113 - MIR SINE MIR -36 226 35 322 312 72 0 chr10 98447724 98447849 -41868916 - MER5A DNA MER1_type -1 188 55 623 180 8 8 chr10 98448002 98448124 -41868641 + L1MB3 LINE L1 6005 6126 -57 1058 155 0 6 chr10 98448157 98448318 -41868447 - AluJo SINE Alu -141 171 12 389 79 32 0 chr10 98448323 98448386 -41868379 + L1MB3 LINE L1 6112 6176 -7 608 251 103 67 chr10 98448779 98449109 -41867656 + L2 LINE L2 2972 3313 0 1224 187 30 0 chr10 98450758 98450988 -41865777 - MER58B DNA MER1_type 0 341 105 290 160 0 0 chr10 98450986 98451036 -41865729 - 5S rRNA rRNA -71 50 1 * 4562 103 25 1 chr10 98451060 98451709 -41865056 + L1PA16 LINE L1 5494 6157 -9 676 143 61 0 chr10 98451728 98451875 -41864890 + L1MA7 LINE L1 6136 6291 0 319 185 0 0 chr10 98451888 98451953 -41864812 - MER58B DNA MER1_type -248 93 29 348 304 268 16 chr10 98451957 98452207 -41864558 - L3 LINE CR1 -44 1533 1221 1779 154 7 3 chr10 98452247 98452539 -41864226 - AluJb SINE Alu -19 293 1 561 217 7 51 chr10 98452842 98452980 -41863785 - MIR3 SINE MIR -46 162 31 347 313 102 24 chr10 98454304 98454470 -41862295 + MIR SINE MIR 34 212 -50 389 268 34 67 chr10 98455672 98455851 -41860914 - MER5A DNA MER1_type 0 189 17 336 198 47 12 chr10 98455909 98455995 -41860770 - MER5A DNA MER1_type -77 112 24 2916 251 88 13 chr10 98455995 98456920 -41859845 - L1MC4 LINE L1 -385 7657 6638 360 0 0 0 chr10 98456920 98456960 -41859805 + (CA)n Simple_repeat Simple_repeat 2 41 0 2916 251 88 13 chr10 98456960 98457114 -41859651 - L1MC4 LINE L1 -1404 6638 6497 249 308 28 56 chr10 98458258 98458365 -41858400 - MER5A DNA MER1_type -85 104 1 912 136 0 0 chr10 98459864 98459996 -41856769 + AluJb SINE Alu 2 133 -179 184 316 237 0 chr10 98460036 98460150 -41856615 - MIR3 SINE MIR -7 201 61 680 285 109 5 chr10 98460640 98460861 -41855904 + MIR SINE MIR 15 258 -4 2030 116 34 65 chr10 98460914 98461301 -41855464 + THE1C LTR MaLR 1 375 0 319 282 7 13 chr10 98461978 98462126 -41854639 - MIR SINE MIR -8 254 28 2345 87 7 0 chr10 98463234 98463532 -41853233 + AluSg1 SINE Alu 1 300 -9 488 320 71 15 chr10 98463616 98463813 -41852952 - MIR SINE MIR -8 254 47 2002 147 0 22 chr10 98464021 98464335 -41852430 - AluSx SINE Alu -5 307 1 4557 159 81 23 chr10 98464335 98465337 -41851428 + L1MC3 LINE L1 6717 7776 -9 319 239 128 96 chr10 98465373 98465561 -41851204 - L1ME3A LINE L1 -94 6076 5883 473 231 142 0 chr10 98465607 98465776 -41850989 - L1ME3A LINE L1 -257 5913 5721 1548 154 9 0 chr10 98466429 98466662 -41850103 - AluJb SINE Alu -14 298 64 421 341 42 6 chr10 98466903 98467070 -41849695 + MIR SINE MIR 58 230 -32 1957 122 11 0 chr10 98467238 98467508 -41849257 - AluSx SINE Alu -39 273 1 1805 129 49 4 chr10 98469468 98469731 -41847034 + AluSx SINE Alu 1 275 -37 183 42 0 0 chr10 98469735 98469759 -41847006 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 300 281 0 0 chr10 98471149 98471238 -41845527 + Charlie2a DNA MER1_type 40 128 -2654 443 66 0 0 chr10 98471238 98471299 -41845466 + Alu SINE Alu 238 298 -11 307 214 344 16 chr10 98471330 98471368 -41845397 + Charlie2a DNA MER1_type 188 212 -2570 2150 125 3 0 chr10 98471368 98471672 -41845093 + AluSx SINE Alu 1 305 -7 307 214 344 16 chr10 98471672 98471859 -41844906 + Charlie2a DNA MER1_type 212 474 -2308 * 664 229 55 18 chr10 98471851 98472069 -41844696 + Charlie2a DNA MER1_type 727 952 -1910 245 330 93 50 chr10 98473912 98474170 -41842595 - L2 LINE L2 -177 3095 2827 2583 107 25 21 chr10 98474278 98474505 -41842260 - MSTB LTR MaLR -2 411 192 2073 144 0 3 chr10 98474505 98474803 -41841962 - AluJo SINE Alu -15 297 1 2583 107 25 21 chr10 98474803 98474996 -41841769 - MSTB LTR MaLR -221 192 1 534 180 87 76 chr10 98475705 98475877 -41840888 + MER5B DNA MER1_type 1 174 -4 1067 178 0 46 chr10 98476438 98476657 -41840108 - MER3 DNA MER1_type 0 209 1 333 0 0 0 chr10 98477027 98477064 -41839701 + (CA)n Simple_repeat Simple_repeat 1 37 0 * 732 86 0 0 chr10 98477063 98477168 -41839597 + (TC)n Simple_repeat Simple_repeat 1 105 0 180 152 0 0 chr10 98477485 98477518 -41839247 + CT-rich Low_complexity Low_complexity 2 34 0 1867 158 16 13 chr10 98477542 98477853 -41838912 + AluJb SINE Alu 1 312 0 357 222 0 11 chr10 98477981 98478071 -41838694 + L1MD3 LINE L1 7897 7985 -10 32 75 0 0 chr10 98478721 98478788 -41837977 + AT_rich Low_complexity Low_complexity 1 67 0 4534 37 2 4 chr10 98478875 98479420 -41837345 + L1PA5 LINE L1 5598 6141 -13 825 160 0 47 chr10 98479614 98479764 -41837001 - FLAM_C SINE Alu 0 143 1 2115 108 3 10 chr10 98480785 98481082 -41835683 - AluSc SINE Alu -14 295 1 2390 106 36 22 chr10 98481242 98481601 -41835164 - THE1B LTR MaLR 0 364 1 269 162 67 38 chr10 98482088 98482193 -41834572 + T-rich Low_complexity Low_complexity 1 108 0 782 167 0 0 chr10 98482203 98482329 -41834436 - FLAM_C SINE Alu -17 126 1 5053 132 14 13 chr10 98482329 98483097 -41833668 - L1MC2 LINE L1 -15 6329 5561 1151 189 47 10 chr10 98483097 98483349 -41833416 + L1MC/D LINE L1 5478 5731 -420 2223 130 0 0 chr10 98483493 98483801 -41832964 - AluSx SINE Alu -4 308 1 43790 66 15 12 chr10 98484329 98485598 -41831167 + Harlequin LTR ERV1 1163 2427 -4469 2295 93 3 0 chr10 98485598 98485899 -41830866 + AluY SINE Alu 1 302 -9 43790 66 15 12 chr10 98485899 98490338 -41826427 + Harlequin LTR ERV1 2427 6888 -8 2052 169 88 41 chr10 98490338 98490805 -41825960 + LTR2B LTR ERV1 2 490 0 2157 177 79 26 chr10 98490805 98491297 -41825468 + LTR49-int LTR ERV1 2758 3275 -3056 * 2392 143 36 113 chr10 98491290 98491509 -41825256 + LTR49-int LTR ERV1 3580 3814 -2517 1399 198 38 34 chr10 98491509 98491802 -41824963 + AluJb SINE Alu 1 294 -18 2392 143 36 113 chr10 98491802 98491884 -41824881 + LTR49-int LTR ERV1 3814 3901 -2430 1911 176 0 19 chr10 98491884 98492202 -41824563 + AluJb SINE Alu 1 312 0 2392 143 36 113 chr10 98492202 98492318 -41824447 + LTR49-int LTR ERV1 3901 4024 -2307 2307 111 0 7 chr10 98492318 98492625 -41824140 - AluSp SINE Alu -8 305 1 2392 143 36 113 chr10 98492625 98492931 -41823834 + LTR49-int LTR ERV1 4024 4249 -2082 3389 163 261 51 chr10 98492931 98493348 -41823417 - MER52C LTR ERV1 0 1278 950 2234 119 0 0 chr10 98493348 98493642 -41823123 - AluSg SINE Alu -16 294 1 3389 163 261 51 chr10 98493642 98494258 -41822507 - MER52C LTR ERV1 -328 950 25 238 179 0 0 chr10 98494258 98494297 -41822468 + MER52A LTR ERV1 1 39 -1716 1251 132 83 25 chr10 98494299 98494463 -41822302 + LTR49-int LTR ERV1 3306 3459 -3604 1593 189 3 26 chr10 98494463 98494769 -41821996 - AluJo SINE Alu -13 299 1 1251 132 83 25 chr10 98494769 98494942 -41821823 + LTR49-int LTR ERV1 3459 5724 -1339 1097 94 0 0 chr10 98494973 98495111 -41821654 - AluSq/x SINE Alu -174 138 1 665 234 8 8 chr10 98495146 98495274 -41821491 + FLAM_A SINE Alu 1 128 -5 2273 84 0 7 chr10 98495782 98496079 -41820686 - AluSc SINE Alu -14 295 1 551 112 56 0 chr10 98496396 98496485 -41820280 + L1MB5 LINE L1 6081 6174 0 686 167 0 19 chr10 98496648 98496756 -41820009 - AluSg/x SINE Alu -72 240 135 1334 164 7 102 chr10 98496812 98497105 -41819660 - L1MB5 LINE L1 0 6174 5910 1012 178 0 12 chr10 98497114 98497277 -41819488 - FAM SINE Alu -17 168 8 3267 166 13 32 chr10 98497277 98497464 -41819301 - L1MB5 LINE L1 -306 5868 5679 2057 110 3 13 chr10 98497464 98497629 -41819136 - AluSx SINE Alu -16 296 134 2472 67 0 0 chr10 98497629 98497926 -41818839 - AluY SINE Alu -14 297 1 2057 110 3 13 chr10 98497926 98498059 -41818706 - AluSx SINE Alu -178 134 1 3267 166 13 32 chr10 98498059 98498536 -41818229 - L1MB5 LINE L1 -495 5679 5216 2195 90 0 48 chr10 98498680 98498990 -41817775 - AluSx SINE Alu -17 295 1 2285 90 7 3 chr10 98499445 98499746 -41817019 - AluSq SINE Alu -11 302 1 2587 34 0 3 chr10 98500075 98500371 -41816394 - AluY SINE Alu -16 295 1 8525 68 11 27 chr10 98501409 98502594 -41814171 - Harlequin LTR ERV1 -5730 1166 1 2136 175 95 37 chr10 98502594 98503057 -41813708 - LTR2B LTR ERV1 0 490 1 1773 230 8 37 chr10 98503058 98503367 -41813398 - LTR49-int LTR ERV1 -3573 2758 2441 2149 119 0 16 chr10 98503367 98503679 -41813086 + AluY SINE Alu 1 307 -4 1773 230 8 37 chr10 98503679 98504001 -41812764 - LTR49-int LTR ERV1 -3890 2441 2068 1018 166 11 0 chr10 98504002 98504177 -41812588 + AluSc SINE Alu 119 295 -14 1401 224 69 72 chr10 98504177 98504787 -41811978 - LTR49-int LTR ERV1 -4268 2063 1372 555 141 0 10 chr10 98504909 98505008 -41811757 - LTR49-int LTR ERV1 -4951 1380 1283 355 301 0 0 chr10 98505008 98505081 -41811684 - tRNA-Glu-GAG tRNA tRNA 0 75 3 758 132 0 25 chr10 98505082 98505203 -41811562 - LTR49-int LTR ERV1 -5123 1208 1091 2169 138 0 0 chr10 98505214 98505525 -41811240 - AluSx SINE Alu -1 311 1 246 81 0 0 chr10 98505537 98505574 -41811191 + (TTC)n Simple_repeat Simple_repeat 3 39 0 2234 116 3 6 chr10 98505585 98505896 -41810869 - AluSx SINE Alu -2 310 1 1400 135 125 65 chr10 98505896 98506084 -41810681 - LTR49-int LTR ERV1 -3192 1688 1513 2230 130 0 0 chr10 98506084 98506392 -41810373 - AluSx SINE Alu -4 308 1 1400 135 125 65 chr10 98506392 98506527 -41810238 - LTR49-int LTR ERV1 -3367 1513 764 * 3256 128 59 36 chr10 98506516 98507072 -41809693 - LTR49-int LTR ERV1 -5762 569 1 1294 159 30 26 chr10 98507075 98507307 -41809458 - LTR49 LTR ERV1 -2 593 361 2157 198 54 106 chr10 98507363 98507621 -41809144 - L1MC4 LINE L1 -836 7206 6936 1863 152 10 16 chr10 98507621 98507924 -41808841 - AluJo SINE Alu -11 301 1 2157 198 54 106 chr10 98507924 98508090 -41808675 - L1MC4 LINE L1 -1106 6936 6763 760 233 0 0 chr10 98508090 98508223 -41808542 + FLAM_A SINE Alu 1 133 0 2157 198 54 106 chr10 98508223 98508322 -41808443 - L1MC4 LINE L1 -1279 6763 6660 1990 136 0 26 chr10 98508322 98508624 -41808141 + AluSx SINE Alu 1 294 -18 2157 198 54 106 chr10 98508624 98508825 -41807940 - L1MC4 LINE L1 -1382 6660 6518 380 282 109 52 chr10 98508872 98509120 -41807645 - L1ME LINE L1 -507 5614 5353 1433 117 34 0 chr10 98509315 98509520 -41807245 - AluSg/x SINE Alu 0 312 101 1854 155 3 17 chr10 98509534 98509831 -41806934 + AluJo SINE Alu 11 303 -9 832 225 61 25 chr10 98509845 98510294 -41806471 + MER4C LTR ERV1 149 465 0 244 284 101 34 chr10 98510461 98510609 -41806156 + L1ME LINE L1 5725 5885 -284 452 123 25 0 chr10 98510878 98510959 -41805806 + GA-rich Low_complexity Low_complexity 3 85 0 441 0 0 0 chr10 98511057 98511106 -41805659 + (CA)n Simple_repeat Simple_repeat 1 49 0 314 344 104 8 chr10 98511295 98511420 -41805345 + L2 LINE L2 3134 3270 -2 997 155 0 0 chr10 98511697 98511852 -41804913 + FRAM SINE Alu 20 174 -2 382 250 50 0 chr10 98511991 98512091 -41804674 - MER112 DNA MER1_type 0 260 156 1100 138 0 0 chr10 98512274 98512433 -41804332 - AluSq SINE Alu -18 295 137 1929 158 0 0 chr10 98512653 98512815 -41803950 - AluSx SINE Alu -14 298 137 198 0 0 0 chr10 98512815 98512837 -41803928 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2252 89 0 3 chr10 98512837 98513119 -41803646 - AluSg SINE Alu -29 281 1 1929 158 0 0 chr10 98513119 98513253 -41803512 - AluSx SINE Alu -173 139 1 198 0 0 0 chr10 98513524 98513546 -41803219 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 273 29 0 0 chr10 98513545 98513579 -41803186 + (CA)n Simple_repeat Simple_repeat 1 34 0 1883 87 0 16 chr10 98513979 98514268 -41802497 + AluY SINE Alu 35 319 0 2150 127 7 0 chr10 98514375 98514675 -41802090 - AluSq SINE Alu -11 302 1 2288 224 110 4 chr10 98514801 98515309 -41801456 + MLT1F1 LTR MaLR 3 564 -3 2314 59 10 26 chr10 98515524 98515830 -41800935 - AluY SINE Alu -10 301 1 216 0 0 0 chr10 98516113 98516137 -41800628 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1885 153 0 0 chr10 98516144 98516418 -41800347 - AluSx SINE Alu -38 274 1 986 196 0 0 chr10 98516457 98516625 -41800140 + AluJb SINE Alu 132 299 -13 21 0 0 0 chr10 98516631 98516652 -41800113 + AT_rich Low_complexity Low_complexity 1 21 0 2234 183 28 34 chr10 98517377 98517842 -41798923 + MLT1C LTR MaLR 6 467 0 544 258 126 11 chr10 98517842 98518014 -41798751 - LTR16C LTR ERVL -36 455 262 2406 121 6 12 chr10 98518014 98518353 -41798412 + MER1B DNA MER1_type 1 337 0 1088 209 263 22 chr10 98518416 98518823 -41797942 - MLT1D LTR MaLR 0 505 1 281 259 49 0 chr10 98518830 98518911 -41797854 - LTR16C LTR ERVL -261 230 146 2564 147 11 38 chr10 98519054 98519418 -41797347 + LTR42 LTR ERVL 18 369 -126 2458 73 7 0 chr10 98519418 98519721 -41797044 + AluSp SINE Alu 1 305 -8 2564 147 11 38 chr10 98519721 98519805 -41796960 + LTR42 LTR ERVL 369 454 -41 627 149 0 0 chr10 98519805 98519899 -41796866 - FRAM SINE Alu -16 160 67 286 217 0 0 chr10 98519900 98519946 -41796819 + LTR42 LTR ERVL 448 493 -2 30 0 0 0 chr10 98520001 98520031 -41796734 + AT_rich Low_complexity Low_complexity 1 30 0 264 30 0 0 chr10 98520264 98520297 -41796468 + (CA)n Simple_repeat Simple_repeat 2 34 0 955 167 12 0 chr10 98520360 98520522 -41796243 - FRAM SINE Alu -11 165 2 371 318 81 0 chr10 98520764 98520912 -41795853 + MER91B DNA MER1_type 26 185 -5 415 289 152 65 chr10 98521263 98521775 -41794990 - L2 LINE L2 -907 2407 1851 565 280 31 62 chr10 98521984 98522186 -41794579 + L3 LINE CR1 786 982 -595 1723 143 65 0 chr10 98522186 98522465 -41794300 + AluJo SINE Alu 2 298 -14 565 280 31 62 chr10 98522465 98522487 -41794278 + L3 LINE CR1 982 1003 -574 264 276 193 43 chr10 98522501 98522853 -41793912 - L2 LINE L2 -1469 1845 1441 2466 63 0 7 chr10 98523318 98523620 -41793145 + AluY SINE Alu 1 300 -11 2367 85 7 3 chr10 98523689 98523994 -41792771 - AluSx SINE Alu -6 306 1 32 0 0 0 chr10 98526498 98526530 -41790235 + AT_rich Low_complexity Low_complexity 1 32 0 883 219 6 0 chr10 98526530 98526694 -41790071 - AluJo SINE Alu -31 281 117 6792 92 27 16 chr10 98526695 98527192 -41789573 - L1MA3 LINE L1 -8 6297 5807 2208 106 0 0 chr10 98527192 98527504 -41789261 - AluSc SINE Alu 0 309 1 6792 92 27 16 chr10 98527504 98527994 -41788771 - L1MA3 LINE L1 -498 5807 5299 1945 119 0 77 chr10 98528070 98528397 -41788368 - AluSq SINE Alu -11 302 1 334 304 0 11 chr10 98528425 98528517 -41788248 + L2 LINE L2 3193 3283 -30 22 0 0 0 chr10 98528517 98528539 -41788226 + AT_rich Low_complexity Low_complexity 1 22 0 256 307 182 33 chr10 98528562 98528953 -41787812 - L2 LINE L2 -2154 1160 712 492 260 74 56 chr10 98528964 98529129 -41787636 + MER20B DNA MER1_type 31 199 -20 347 188 0 14 chr10 98529155 98529224 -41787541 + AluJ/FLAM SINE Alu 2 69 -233 237 219 146 0 chr10 98529714 98529810 -41786955 - MIR SINE MIR -33 229 120 239 163 0 82 chr10 98530040 98530089 -41786676 - L2 LINE L2 -18 3254 3210 396 289 28 44 chr10 98530685 98530865 -41785900 - L1ME3A LINE L1 -32 6138 5962 438 256 39 135 chr10 98531822 98531851 -41784914 + MIR SINE MIR 7 37 -225 2065 138 7 0 chr10 98531851 98532148 -41784617 + AluJb SINE Alu 1 299 -13 438 256 39 135 chr10 98532148 98532348 -41784417 + MIR SINE MIR 37 214 -48 232 368 62 14 chr10 98532691 98532835 -41783930 + MIR3 SINE MIR 5 155 -53 363 290 132 1 chr10 98533061 98533231 -41783534 + MIR SINE MIR 15 207 -55 265 311 149 8 chr10 98533441 98533599 -41783166 - MIR SINE MIR -57 205 22 2412 154 62 2 chr10 98533894 98534296 -41782469 + MSTB LTR MaLR 1 426 0 2188 116 0 0 chr10 98534707 98535000 -41781765 - AluSx SINE Alu -19 293 1 1032 257 22 0 chr10 98535328 98535550 -41781215 + MIR SINE MIR 15 241 -21 1569 190 14 14 chr10 98535712 98536002 -41780763 + AluJo SINE Alu 1 290 -22 750 128 138 112 chr10 98536455 98536759 -41780006 - MER33 DNA MER1_type -5 319 8 2171 117 0 28 chr10 98536793 98537110 -41779655 - AluSc SINE Alu 0 309 2 203 147 0 0 chr10 98537132 98537166 -41779599 + (TG)n Simple_repeat Simple_repeat 2 35 0 2463 83 0 6 chr10 98537482 98537795 -41778970 + AluY SINE Alu 1 311 0 947 189 42 37 chr10 98537918 98538135 -41778630 + MER20 DNA MER1_type 2 219 0 21 0 0 0 chr10 98538508 98538529 -41778236 + AT_rich Low_complexity Low_complexity 1 21 0 356 255 31 20 chr10 98539020 98539118 -41777647 - L2 LINE L2 -20 3293 3195 36 0 0 0 chr10 98539269 98539305 -41777460 + AT_rich Low_complexity Low_complexity 1 36 0 38 75 0 0 chr10 98539355 98539435 -41777330 + AT_rich Low_complexity Low_complexity 1 80 0 251 273 26 41 chr10 98539626 98539820 -41776945 - L1M4 LINE L1 -1500 4646 4456 587 144 133 0 chr10 98540519 98540648 -41776117 + MER5A DNA MER1_type 1 139 -39 207 0 0 0 chr10 98541546 98541569 -41775196 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 386 234 0 0 chr10 98541575 98541652 -41775113 + MIR SINE MIR 138 214 -48 196 305 146 44 chr10 98543251 98543477 -41773288 + L2 LINE L2 2008 2256 -1058 1019 193 107 7 chr10 98543642 98543932 -41772833 - MER33 DNA MER1_type -4 320 2 403 315 125 22 chr10 98543950 98544134 -41772631 + L3 LINE CR1 1318 1520 -57 767 168 23 0 chr10 98544146 98544277 -41772488 - AluJb SINE Alu -178 134 1 27 73 0 0 chr10 98544306 98544361 -41772404 + AT_rich Low_complexity Low_complexity 1 55 0 2044 141 3 0 chr10 98544440 98544737 -41772028 - AluSx SINE Alu -14 298 1 332 280 53 79 chr10 98544743 98544932 -41771833 - L1MC4a LINE L1 -1873 5935 5752 291 161 0 0 chr10 98544954 98545010 -41771755 + (TG)n Simple_repeat Simple_repeat 2 57 0 318 208 39 13 chr10 98545012 98545089 -41771676 - L1MC4a LINE L1 -493 5628 5550 312 305 53 7 chr10 98545227 98545368 -41771397 - MIR SINE MIR -61 201 46 29 70 0 0 chr10 98545872 98545929 -41770836 + AT_rich Low_complexity Low_complexity 1 57 0 518 205 43 0 chr10 98545933 98546050 -41770715 - L1ME1 LINE L1 -5 6161 6040 682 222 38 10 chr10 98546097 98546326 -41770439 - L1MA4 LINE L1 0 6300 6073 1820 156 0 36 chr10 98546352 98546539 -41770226 - AluJb SINE Alu -15 297 124 2602 47 0 0 chr10 98546539 98546840 -41769925 - AluY SINE Alu -10 301 1 1820 156 0 36 chr10 98546840 98546960 -41769805 - AluJb SINE Alu -188 124 1 670 266 89 0 chr10 98548215 98548418 -41768347 - MIR SINE MIR -5 257 37 303 231 148 0 chr10 98548446 98548554 -41768211 - L1ME1 LINE L1 -2067 5741 5618 285 237 21 32 chr10 98550004 98550097 -41766668 - L1MC5 LINE L1 -48 7913 7822 2434 87 0 0 chr10 98550454 98550753 -41766012 - AluSx SINE Alu -13 299 1 891 173 62 148 chr10 98550957 98550984 -41765781 - MLT1A1 LTR MaLR -38 327 299 2355 87 7 0 chr10 98550984 98551283 -41765482 + AluSq SINE Alu 1 301 -12 891 173 62 148 chr10 98551283 98551497 -41765268 - MLT1A1 LTR MaLR -66 299 124 916 59 52 22 chr10 98551497 98551632 -41765133 + MER85 DNA T2_type 1 139 0 891 173 62 148 chr10 98551632 98551747 -41765018 - MLT1A1 LTR MaLR -241 124 1 477 299 94 8 chr10 98551827 98552061 -41764704 + Charlie8 DNA MER1_type 1 254 -2163 423 38 0 0 chr10 98555083 98555136 -41761629 + (CA)n Simple_repeat Simple_repeat 2 54 0 217 313 24 24 chr10 98555167 98555250 -41761515 - L2 LINE L2 0 3272 3190 2212 106 10 7 chr10 98555463 98555765 -41761000 + AluSg SINE Alu 1 303 -7 1865 103 35 71 chr10 98556923 98557234 -41759531 - AluSq SINE Alu -13 300 1 2263 105 13 0 chr10 98557825 98558130 -41758635 - AluSc SINE Alu 0 309 1 1851 159 28 0 chr10 98559089 98559416 -41757349 + MER58B DNA MER1_type 6 341 0 1372 102 107 5 chr10 98560123 98560319 -41756446 - AluSq SINE Alu -97 216 1 2389 80 0 0 chr10 98560462 98560750 -41756015 - AluSc SINE Alu -21 288 1 2208 138 0 0 chr10 98560812 98561123 -41755642 + AluSx SINE Alu 1 311 -1 1006 162 0 12 chr10 98561125 98561292 -41755473 + AluJo/FRAM SINE Alu 136 300 -12 945 287 70 39 chr10 98561542 98562094 -41754671 - L2 LINE L2 -2 3311 2778 2531 75 0 0 chr10 98562094 98562399 -41754366 - AluSg SINE Alu -5 305 1 945 287 70 39 chr10 98562399 98562426 -41754339 - L2 LINE L2 -535 2778 2753 782 184 0 0 chr10 98562426 98562551 -41754214 + FLAM_A SINE Alu 1 125 -8 945 287 70 39 chr10 98562551 98562692 -41754073 - L2 LINE L2 -560 2753 2558 406 225 29 72 chr10 98562820 98562958 -41753807 - MIR SINE MIR -16 246 115 230 275 0 8 chr10 98564692 98564812 -41751953 + (TA)n Simple_repeat Simple_repeat 1 119 0 372 253 107 17 chr10 98565746 98565924 -41750841 + MER117 DNA MER1_type 4 197 0 2088 140 0 13 chr10 98566666 98566980 -41749785 - AluSx SINE Alu -2 310 1 2039 130 0 0 chr10 98568240 98568546 -41748219 - AluSx SINE Alu 0 306 1 2440 81 0 3 chr10 98568882 98569190 -41747575 - AluY SINE Alu -4 307 1 3806 98 22 2 chr10 98569193 98569773 -41746992 - Tigger1 DNA MER2_type -441 1977 1386 1998 74 28 3 chr10 98569771 98570055 -41746710 - Tigger1 DNA MER2_type -1166 1252 962 * 720 71 20 0 chr10 98570055 98570153 -41746612 + AluY SINE Alu 1 100 -211 1390 54 102 7 chr10 98570323 98570595 -41746170 - MER11A LTR ERVK -872 394 1 752 81 0 0 chr10 98570801 98570900 -41745865 + AluJ/FLAM SINE Alu 1 99 -213 227 325 16 40 chr10 98572279 98572405 -41744360 - Charlie2 DNA MER1_type -2657 125 3 244 292 22 0 chr10 98572549 98572638 -41744127 - Charlie8 DNA MER1_type -2324 93 3 1217 284 89 67 chr10 98573038 98573436 -41743329 - L3 LINE CR1 -200 1377 956 1942 156 3 0 chr10 98573436 98573731 -41743034 + AluJb SINE Alu 1 296 -16 1217 284 89 67 chr10 98573731 98574004 -41742761 - L3 LINE CR1 -621 956 691 251 362 21 0 chr10 98574154 98574248 -41742517 - MIR SINE MIR -68 140 45 249 321 19 57 chr10 98574286 98574392 -41742373 + MER5B DNA MER1_type 22 123 -55 330 422 17 29 chr10 98574517 98574868 -41741897 - L3 LINE CR1 -1189 388 42 1592 212 84 17 chr10 98576106 98576582 -41740183 + Charlie4a DNA MER1_type 1 508 0 180 248 20 20 chr10 98576664 98576817 -41739948 + (TA)n Simple_repeat Simple_repeat 2 154 0 200 203 63 63 chr10 98579457 98579536 -41737229 + MIR SINE MIR 61 139 -69 318 395 42 14 chr10 98582463 98582678 -41734087 - L2 LINE L2 -4 3268 3048 22 56 0 0 chr10 98583065 98583101 -41733664 + AT_rich Low_complexity Low_complexity 1 36 0 337 306 147 0 chr10 98583112 98583269 -41733496 - MIR SINE MIR -2 260 81 402 244 195 28 chr10 98583400 98583687 -41733078 - MLT1K LTR MaLR -162 426 92 218 319 56 0 chr10 98583781 98583853 -41732912 - MIR SINE MIR -179 83 8 758 169 8 32 chr10 98584232 98584356 -41732409 + FLAM_A SINE Alu 2 122 -11 21 0 0 0 chr10 98584356 98584377 -41732388 + AT_rich Low_complexity Low_complexity 1 21 0 21 100 0 0 chr10 98584414 98584484 -41732281 + AT_rich Low_complexity Low_complexity 1 70 0 238 291 82 9 chr10 98585403 98585513 -41731252 - MIR3 SINE MIR -85 123 6 1536 125 19 0 chr10 98585964 98586180 -41730585 - L1PB3 LINE L1 0 6154 5935 209 198 277 0 chr10 98586237 98586338 -41730427 + MIR3 SINE MIR 31 159 -49 6942 112 31 101 chr10 98587297 98587890 -41728875 - Tigger3b DNA MER2_type -1797 1231 779 1484 181 49 26 chr10 98587890 98588194 -41728571 - AluJo SINE Alu -1 311 1 6942 112 31 101 chr10 98588194 98588923 -41727842 - Tigger3b DNA MER2_type -2249 779 1 905 155 0 0 chr10 98589037 98589166 -41727599 - FLAM_A SINE Alu -3 130 2 355 309 58 47 chr10 98589359 98589550 -41727215 + MIR SINE MIR 39 231 -31 812 99 90 0 chr10 98589550 98589661 -41727104 + AluSx SINE Alu 51 171 -141 483 296 177 18 chr10 98590104 98590162 -41726603 - MIR SINE MIR 0 262 215 1532 121 67 9 chr10 98590162 98590385 -41726380 + MER46A DNA MER2_type 1 236 0 483 296 177 18 chr10 98590385 98590552 -41726213 - MIR SINE MIR -47 215 1 288 247 0 52 chr10 98590740 98590817 -41725948 - L2 LINE L2 0 3272 3200 336 300 121 0 chr10 98590878 98591018 -41725747 - MIR SINE MIR -78 184 28 2204 121 0 19 chr10 98591704 98592017 -41724748 + AluSx SINE Alu 1 307 -5 2640 140 15 0 chr10 98592346 98592745 -41724020 - Tigger1 DNA MER2_type 0 2418 2014 561 153 20 20 chr10 98592920 98593018 -41723747 - AluJ/FLAM SINE Alu -213 99 2 217 359 103 46 chr10 98593683 98593964 -41722801 - L3b LINE CR1 -1 1582 1286 535 294 31 6 chr10 98594093 98594256 -41722509 - MIR SINE MIR -12 250 84 307 264 0 55 chr10 98594656 98594747 -41722018 + MIR SINE MIR 177 262 0 226 231 0 0 chr10 98595447 98595486 -41721279 + L2 LINE L2 3222 3260 -12 220 172 0 47 chr10 98595598 98595612 -41721153 + (TAGA)n Simple_repeat Simple_repeat 2 15 -47 1641 151 73 15 chr10 98595612 98595884 -41720881 + AluSx SINE Alu 1 288 -24 220 172 0 47 chr10 98595884 98595896 -41720869 + (TAGA)n Simple_repeat Simple_repeat 15 26 -36 2199 129 3 0 chr10 98595896 98596199 -41720566 + AluSx SINE Alu 1 304 -8 220 172 0 47 chr10 98596199 98596235 -41720530 + (TAGA)n Simple_repeat Simple_repeat 26 62 0 1169 80 0 13 chr10 98597077 98597228 -41719537 + L1PA10 LINE L1 6015 6163 -5 677 277 68 9 chr10 98597443 98597663 -41719102 + MIR SINE MIR 5 237 -25 212 241 52 0 chr10 98597859 98597917 -41718848 - MIR3 SINE MIR -21 187 127 1508 138 0 4 chr10 98598574 98598799 -41717966 - MER2 DNA MER2_type -1 344 121 309 75 0 0 chr10 98598800 98598840 -41717925 + LTR23 LTR ERV1 320 359 -78 593 175 44 9 chr10 98598854 98598968 -41717797 - MER2 DNA MER2_type -210 135 18 342 283 97 0 chr10 98599068 98599181 -41717584 + L2 LINE L2 3187 3310 -3 1834 150 0 20 chr10 98599980 98600280 -41716485 + AluSx SINE Alu 1 294 -18 2311 92 3 3 chr10 98600811 98601103 -41715662 - AluSc SINE Alu -17 292 1 372 206 69 10 chr10 98601520 98601622 -41715143 + L1MC5 LINE L1 7808 7915 -46 307 259 245 14 chr10 98602047 98602194 -41714571 - MER5A DNA MER1_type -5 184 4 2207 127 61 0 chr10 98602329 98602675 -41714090 - MLT1B LTR MaLR -3 387 21 269 244 88 108 chr10 98602700 98603053 -41713712 - L1ME4a LINE L1 -28 6093 5748 560 267 106 6 chr10 98603673 98603853 -41712912 - MIR SINE MIR -39 223 26 1641 140 16 90 chr10 98604151 98604472 -41712293 - AluJb SINE Alu -15 297 1 218 228 18 18 chr10 98604474 98604531 -41712234 + MER5A DNA MER1_type 128 184 -5 1631 183 36 0 chr10 98604586 98604865 -41711900 + AluJo SINE Alu 1 289 -23 828 168 19 12 chr10 98605197 98605358 -41711407 + MER5B DNA MER1_type 11 172 -6 3240 205 91 9 chr10 98605612 98606295 -41710470 - MER21B LTR ERV1 -124 739 1 392 342 161 13 chr10 98606370 98606674 -41710091 + L2 LINE L2 2423 2771 -543 425 220 209 66 chr10 98606794 98606976 -41709789 - Charlie8 DNA MER1_type -2172 245 38 448 359 89 33 chr10 98607240 98607599 -41709166 + L2 LINE L2 2890 3268 -4 291 259 103 43 chr10 98608521 98608637 -41708128 - MER117 DNA MER1_type -70 127 5 2109 113 14 3 chr10 98609149 98609442 -41707323 + AluSc SINE Alu 1 296 -13 245 319 163 6 chr10 98609523 98609683 -41707082 + L3 LINE CR1 486 670 -907 2340 73 0 3 chr10 98610336 98610622 -41706143 + AluSx SINE Alu 19 303 -9 355 368 26 7 chr10 98610705 98610857 -41705908 - MIR SINE MIR -106 156 2 2226 115 0 13 chr10 98611800 98612105 -41704660 + AluSx SINE Alu 1 301 -11 244 200 0 0 chr10 98612708 98612748 -41704017 - L2 LINE L2 -22 3291 3252 260 236 255 11 chr10 98613307 98613421 -41703344 - MIR SINE MIR -65 143 3 2023 127 39 0 chr10 98613610 98613894 -41702871 + AluSg SINE Alu 1 295 -15 1062 83 0 0 chr10 98614696 98614829 -41701936 - AluY SINE Alu -7 304 172 2171 119 14 0 chr10 98616272 98616567 -41700198 + AluSg SINE Alu 1 299 -11 941 146 24 18 chr10 98617118 98617282 -41699483 + FRAM SINE Alu 1 159 -17 1800 155 0 14 chr10 98617291 98617417 -41699348 + AluJb SINE Alu 10 136 -176 2374 96 0 0 chr10 98617417 98617720 -41699045 + AluSq SINE Alu 2 304 -9 1800 155 0 14 chr10 98617720 98617883 -41698882 + AluJb SINE Alu 136 295 -17 316 262 168 37 chr10 98618213 98618320 -41698445 + MIR SINE MIR 5 125 -137 319 204 247 21 chr10 98618322 98618415 -41698350 + MER63 DNA MER1_type 2 741 -321 204 256 244 23 chr10 98618483 98618569 -41698196 + MIR SINE MIR 137 241 -21 299 344 8 25 chr10 98618635 98618757 -41698008 + L2 LINE L2 3153 3272 0 243 333 13 13 chr10 98618767 98618842 -41697923 + L3 LINE CR1 1497 1571 -6 327 239 71 18 chr10 98618968 98619081 -41697684 + MIR SINE MIR 78 196 -66 223 216 78 0 chr10 98619113 98619164 -41697601 + MIR3 SINE MIR 131 185 -23 2344 92 13 3 chr10 98620230 98620535 -41696230 + AluSp SINE Alu 1 308 -5 196 308 0 46 chr10 98620569 98620634 -41696131 - MIR SINE MIR -58 150 89 276 333 0 0 chr10 98621990 98622074 -41694691 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2418 93 0 6 chr10 98622758 98623071 -41693694 + AluSq SINE Alu 1 311 -2 2046 87 11 4 chr10 98623181 98623458 -41693307 + AluSq SINE Alu 22 300 -13 201 74 0 0 chr10 98623490 98623517 -41693248 + (TTC)n Simple_repeat Simple_repeat 2 28 0 2329 77 7 3 chr10 98624207 98624504 -41692261 - AluSq SINE Alu -15 298 1 199 333 95 0 chr10 98624860 98624923 -41691842 + L2 LINE L2 3151 3219 -53 324 242 183 25 chr10 98625200 98625320 -41691445 - MIR3 SINE MIR -59 149 11 2129 93 28 7 chr10 98625794 98626084 -41690681 + AluSx SINE Alu 1 296 -16 1068 141 0 13 chr10 98626213 98626369 -41690396 + FRAM SINE Alu 1 153 -23 1802 163 23 17 chr10 98627769 98628069 -41688696 - AluJb SINE Alu -10 302 1 886 166 43 16 chr10 98628193 98628380 -41688385 - L1MD3 LINE L1 0 7995 7804 887 160 0 0 chr10 98628804 98628935 -41687830 - FLAM_C SINE Alu -2 131 1 214 344 0 0 chr10 98629008 98629069 -41687696 - MIR SINE MIR -103 105 45 440 274 117 56 chr10 98629142 98629321 -41687444 + MIR3 SINE MIR 17 206 -2 735 164 37 52 chr10 98629837 98629971 -41686794 + AluJo SINE Alu 3 134 -178 1413 200 49 0 chr10 98630082 98630367 -41686398 + AluJo SINE Alu 1 299 -13 588 281 153 18 chr10 98630439 98630667 -41686098 + MIR SINE MIR 1 259 -3 378 224 182 71 chr10 98631257 98631427 -41685338 - MER5A DNA MER1_type 0 189 1 21 89 0 0 chr10 98632133 98632189 -41684576 + AT_rich Low_complexity Low_complexity 1 56 0 2014 104 4 4 chr10 98632995 98633275 -41683490 - AluSx SINE Alu -12 300 21 2249 53 7 50 chr10 98633847 98634149 -41682616 + AluY SINE Alu 1 289 -22 438 320 142 5 chr10 98634694 98634913 -41681852 - L3 LINE CR1 -86 1491 1243 203 219 206 14 chr10 98634959 98635032 -41681733 - L2 LINE L2 0 3313 3227 22 56 0 0 chr10 98635255 98635291 -41681474 + AT_rich Low_complexity Low_complexity 1 36 0 2275 68 3 23 chr10 98636140 98636449 -41680316 - AluY SINE Alu -8 303 1 193 411 41 0 chr10 98636449 98636522 -41680243 + L2 LINE L2 3133 3208 -64 1967 124 11 3 chr10 98636951 98637267 -41679498 - AluSx SINE Alu 0 318 1 2344 86 0 3 chr10 98637267 98637568 -41679197 - AluSc SINE Alu -9 300 1 2143 105 14 3 chr10 98638198 98638493 -41678272 + AluSg SINE Alu 1 298 -12 1685 200 27 29 chr10 98638827 98639202 -41677563 + MLT1A2 LTR MaLR 1 374 0 2115 185 72 0 chr10 98639204 98639663 -41677102 - L1MB5 LINE L1 -22 6152 5661 3988 176 41 54 chr10 98639670 98640820 -41675945 - L1MA6 LINE L1 0 6300 5163 2428 89 0 0 chr10 98640992 98641294 -41675471 - AluSc SINE Alu -7 302 1 1543 172 28 21 chr10 98641393 98641678 -41675087 - AluJo SINE Alu -25 287 1 986 198 21 5 chr10 98641744 98641936 -41674829 + AluJo SINE Alu 118 312 0 2518 72 0 0 chr10 98642149 98642453 -41674312 - AluSq SINE Alu -9 304 1 1815 151 62 0 chr10 98642688 98643012 -41673753 - MER2 DNA MER2_type 0 344 1 223 385 32 6 chr10 98643030 98643186 -41673579 - L2 LINE L2 -453 2861 2702 1632 184 148 6 chr10 98643546 98643911 -41672854 + MER54A LTR ERVL 485 901 0 378 257 0 35 chr10 98644105 98644218 -41672547 + L1ME1 LINE L1 6040 6148 -18 2095 236 75 43 chr10 98644468 98645367 -41671398 - L1M4 LINE L1 -1454 4692 3766 2217 103 0 7 chr10 98645372 98645673 -41671092 - AluSg1 SINE Alu -2 307 9 904 161 0 6 chr10 98645701 98645862 -41670903 - L1MB8 LINE L1 -2 6176 6017 2337 123 0 0 chr10 98646355 98646663 -41670102 + AluSx SINE Alu 1 308 -4 1944 176 0 13 chr10 98647119 98647431 -41669334 - AluJb SINE Alu -4 308 1 1789 160 28 3 chr10 98647561 98647843 -41668922 - AluJb SINE Alu -22 290 2 30 0 0 0 chr10 98647885 98647915 -41668850 + AT_rich Low_complexity Low_complexity 1 30 0 1886 153 0 7 chr10 98648580 98648874 -41667891 - AluJb SINE Alu -20 292 1 543 192 30 0 chr10 98648914 98649013 -41667752 - FLAM_A SINE Alu -28 114 13 2201 121 16 0 chr10 98649971 98650277 -41666488 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr10 98650913 98650941 -41665824 + AT_rich Low_complexity Low_complexity 1 28 0 1584 166 22 7 chr10 98651762 98652039 -41664726 + AluSx SINE Alu 1 281 -31 229 167 0 0 chr10 98652164 98652200 -41664565 - Alu SINE Alu -135 168 133 2442 101 0 0 chr10 98653002 98653310 -41663455 + AluSx SINE Alu 1 308 -4 1487 142 5 5 chr10 98653403 98653621 -41663144 + AluJb SINE Alu 1 218 -94 826 144 8 0 chr10 98653633 98653765 -41663000 - MSTD LTR MaLR -261 135 3 403 319 29 14 chr10 98653767 98654046 -41662719 - L1ME3A LINE L1 -294 5876 5594 492 269 112 44 chr10 98654123 98654493 -41662272 - L1ME3A LINE L1 -661 5505 5127 610 299 65 25 chr10 98654552 98654915 -41661850 - L1ME3A LINE L1 -1088 5058 4653 2222 104 7 0 chr10 98654915 98655212 -41661553 - AluSc SINE Alu -10 299 1 610 299 65 25 chr10 98655212 98655492 -41661273 - L1ME3A LINE L1 -1493 4653 4386 25 51 0 0 chr10 98655549 98655588 -41661177 + AT_rich Low_complexity Low_complexity 1 39 0 1539 77 0 0 chr10 98655601 98655784 -41660981 - AluSc SINE Alu -126 183 1 2606 206 51 61 chr10 98655784 98656096 -41660669 - L1M4c LINE L1 -4728 1918 1605 2048 106 0 4 chr10 98656096 98656370 -41660395 - AluY SINE Alu -4 307 35 2606 206 51 61 chr10 98656370 98657164 -41659601 - L1M4c LINE L1 -5041 1605 817 2316 100 0 10 chr10 98657573 98657882 -41658883 - AluSx SINE Alu -6 306 1 451 230 14 0 chr10 98657962 98658101 -41658664 - L1M4 LINE L1 -960 5186 5046 478 270 49 18 chr10 98658404 98658567 -41658198 - LTR41 LTR ERVL -585 188 21 1774 169 10 25 chr10 98658939 98659253 -41657512 - AluJo SINE Alu -3 309 1 1915 108 0 0 chr10 98659676 98659926 -41656839 - AluSg SINE Alu -60 250 1 27 62 0 0 chr10 98660077 98660125 -41656640 + AT_rich Low_complexity Low_complexity 1 48 0 1010 76 0 0 chr10 98660364 98660496 -41656269 - L1PA8 LINE L1 -12 6160 6029 210 143 0 0 chr10 98660843 98660878 -41655887 + (TTC)n Simple_repeat Simple_repeat 2 36 0 697 199 0 23 chr10 98662092 98662223 -41654542 - FLAM_A SINE Alu -5 128 1 1495 244 39 12 chr10 98662293 98662666 -41654099 + MER119 DNA MER1_type 1 387 -196 2165 141 3 3 chr10 98662666 98662978 -41653787 + AluSx SINE Alu 1 312 0 1495 244 39 12 chr10 98662978 98663013 -41653752 + MER119 DNA MER1_type 387 420 -163 491 115 0 125 chr10 98663117 98663221 -41653544 - L1PA14 LINE L1 -266 5895 5805 1972 126 19 16 chr10 98663223 98663307 -41653458 - L1MA2 LINE L1 -163 7560 7478 2205 119 3 0 chr10 98663307 98663600 -41653165 - AluSp SINE Alu -19 294 1 1972 126 19 16 chr10 98663600 98663880 -41652885 - L1MA2 LINE L1 -245 7478 7195 634 137 0 0 chr10 98663881 98663983 -41652782 - AluSg/x SINE Alu -3 306 205 13047 148 17 81 chr10 98663984 98665084 -41651681 - L1MA2 LINE L1 -520 7204 6035 2320 78 26 3 chr10 98665084 98665390 -41651375 - AluSp SINE Alu 0 313 1 13047 148 17 81 chr10 98665390 98666986 -41649779 - L1MA2 LINE L1 -1689 6035 4338 1113 188 5 0 chr10 98666986 98667178 -41649587 - AluJb SINE Alu 0 312 120 13047 148 17 81 chr10 98667178 98668538 -41648227 - L1MA2 LINE L1 -3386 4338 3250 1618 190 10 17 chr10 98668538 98668838 -41647927 - AluJo SINE Alu -4 308 11 13047 148 17 81 chr10 98668838 98668950 -41647815 - L1MA2 LINE L1 -4474 3250 3132 1773 121 0 12 chr10 98668953 98669202 -41647563 + AluSx SINE Alu 1 246 -66 263 223 0 64 chr10 98669512 98669606 -41647159 + L1MC4 LINE L1 6616 6703 -1339 862 154 0 23 chr10 98669607 98669782 -41646983 + (TATG)n Simple_repeat Simple_repeat 4 174 0 243 0 0 0 chr10 98669782 98669809 -41646956 + (CA)n Simple_repeat Simple_repeat 2 28 0 2151 107 0 7 chr10 98669823 98670112 -41646653 - AluSc SINE Alu -20 289 3 2680 179 93 13 chr10 98670118 98670824 -41645941 + Charlie1 DNA MER1_type 1974 2736 -25 22 0 0 0 chr10 98670828 98670850 -41645915 + AT_rich Low_complexity Low_complexity 1 22 0 969 190 0 0 chr10 98670850 98671013 -41645752 + FRAM SINE Alu 1 163 -3 880 250 88 21 chr10 98671059 98671491 -41645274 + L1MEc LINE L1 2063 2523 -3873 811 254 65 17 chr10 98671516 98671834 -41644931 + L1MEc LINE L1 2533 2875 -3340 2392 153 42 33 chr10 98671834 98672258 -41644507 + MSTC LTR MaLR 1 428 0 811 254 65 17 chr10 98672258 98672341 -41644424 + L1MEc LINE L1 2875 2953 -3262 1855 149 7 10 chr10 98672442 98672730 -41644035 - AluJb SINE Alu -25 287 1 203 364 121 14 chr10 98674291 98674431 -41642334 - L2 LINE L2 -239 3033 2879 4336 101 7 26 chr10 98674590 98675280 -41641485 + L1MA5A LINE L1 5620 6296 -1 329 306 68 65 chr10 98675435 98675713 -41641052 - L1MCa LINE L1 -5352 1074 796 230 182 0 0 chr10 98675895 98675939 -41640826 - L1M4 LINE L1 -2298 3848 3805 267 202 0 0 chr10 98675992 98676076 -41640689 + (TA)n Simple_repeat Simple_repeat 2 85 0 10499 201 41 17 chr10 98676094 98677226 -41639539 - L1MC1 LINE L1 -26 6587 5484 1164 130 88 133 chr10 98677226 98677580 -41639185 + MER44D DNA MER2_type 2 609 0 10499 201 41 17 chr10 98677580 98678177 -41638588 - L1MC1 LINE L1 -1129 5484 4903 2153 88 39 0 chr10 98678177 98678460 -41638305 - AluSp SINE Alu -18 295 2 10499 201 41 17 chr10 98678460 98679598 -41637167 - L1MC1 LINE L1 -1710 4903 3794 1674 132 44 94 chr10 98679598 98679917 -41636848 + AluSx SINE Alu 1 303 -9 10499 201 41 17 chr10 98679917 98681028 -41635737 - L1MC1 LINE L1 -2819 3794 2513 1662 86 0 4 chr10 98681047 98681280 -41635485 - L1PA8 LINE L1 -9 6163 5932 274 230 0 14 chr10 98681280 98681354 -41635411 - L1MC1 LINE L1 -4039 2568 2496 932 220 11 0 chr10 98681356 98681542 -41635223 - AluJo SINE Alu -3 309 122 2285 142 69 38 chr10 98681542 98682007 -41634758 - L1MC1 LINE L1 -3971 2455 1971 2108 163 69 17 chr10 98682007 98682412 -41634353 + MSTC LTR MaLR 1 426 -2 2285 142 69 38 chr10 98682412 98682452 -41634313 - L1MC1 LINE L1 -4455 1971 1934 4798 104 18 107 chr10 98682482 98684005 -41632760 - pTR5 LTR ERV1 0 2606 1524 1430 108 0 39 chr10 98684007 98684211 -41632554 + AluSg/x SINE Alu 108 303 -9 6681 160 76 39 chr10 98684217 98685856 -41630909 - L1MCa LINE L1 -4230 2197 58 494 171 0 12 chr10 98685856 98685938 -41630827 - AluJ/FLAM SINE Alu -228 84 4 244 211 0 19 chr10 98685941 98685993 -41630772 - L1MCa LINE L1 -6356 70 20 * 731 233 42 82 chr10 98685987 98686213 -41630552 - L1M4 LINE L1 -2383 3763 3555 748 181 32 153 chr10 98686213 98686462 -41630303 - MER20 DNA MER1_type 0 219 1 731 233 42 82 chr10 98686462 98686591 -41630174 - L1M4 LINE L1 -2591 3555 3422 305 91 0 0 chr10 98686839 98686883 -41629882 + AluSc SINE Alu 242 285 -14 2078 136 7 0 chr10 98687185 98687480 -41629285 + AluSq SINE Alu 1 297 -16 709 144 16 16 chr10 98688083 98688208 -41628557 - FLAM_A SINE Alu -8 125 1 1725 141 94 7 chr10 98688320 98688596 -41628169 + AluSx SINE Alu 2 301 -11 208 264 0 0 chr10 98688819 98688872 -41627893 + (TA)n Simple_repeat Simple_repeat 2 54 0 350 125 0 0 chr10 98690003 98690051 -41626714 - Alu SINE Alu -10 292 245 1771 216 17 5 chr10 98690171 98690574 -41626191 - L1MD3 LINE L1 -50 7945 7538 1009 222 163 38 chr10 98690574 98690731 -41626034 - Charlie1a DNA MER1_type -2187 574 438 2430 81 3 0 chr10 98690731 98691041 -41625724 - AluSp SINE Alu -2 311 1 1009 222 163 38 chr10 98691041 98691252 -41625513 - Charlie1a DNA MER1_type -2323 438 160 341 159 63 0 chr10 98691248 98691311 -41625454 - AluJo SINE Alu -9 293 227 * 405 216 0 0 chr10 98691319 98691393 -41625372 - AluJo SINE Alu -152 160 87 475 258 93 7 chr10 98691394 98691545 -41625220 - Charlie1a DNA MER1_type -1285 170 7 505 226 40 0 chr10 98691554 98691678 -41625087 - L1MEc LINE L1 -4334 2062 1934 1078 284 114 34 chr10 98691704 98692415 -41624350 - L1MEc LINE L1 -4516 1880 1113 255 234 0 0 chr10 98692439 98692503 -41624262 + L1MEc LINE L1 1048 1111 -5285 260 293 121 11 chr10 98692530 98692704 -41624061 + L1MEc LINE L1 620 812 -5584 352 281 85 101 chr10 98692708 98692949 -41623816 - L1MEc LINE L1 -5794 602 370 2139 135 0 3 chr10 98692949 98693253 -41623512 - AluSx SINE Alu -3 309 7 352 281 85 101 chr10 98693253 98693456 -41623309 - L1MEc LINE L1 -6026 370 165 257 272 87 11 chr10 98693735 98693827 -41622938 + MLT1K LTR MaLR 488 586 -2 1849 144 11 3 chr10 98693887 98694172 -41622593 - AluJb SINE Alu -25 287 1 240 86 0 0 chr10 98694197 98694232 -41622533 + (T)n Simple_repeat Simple_repeat 1 35 0 2166 123 0 7 chr10 98694503 98694805 -41621960 + AluSx SINE Alu 1 300 -12 274 333 108 17 chr10 98694922 98695042 -41621723 + L2 LINE L2 2728 2858 -456 288 189 40 14 chr10 98695410 98695484 -41621281 - L1MC5 LINE L1 -625 7336 7261 680 184 8 8 chr10 98695632 98695757 -41621008 + FLAM_C SINE Alu 1 125 -18 223 186 284 69 chr10 98695797 98695899 -41620866 + MIR SINE MIR 3 126 -136 27 49 0 0 chr10 98696100 98696141 -41620624 + AT_rich Low_complexity Low_complexity 1 41 0 2227 101 6 22 chr10 98696582 98696900 -41619865 + AluSq SINE Alu 1 313 0 732 344 113 31 chr10 98697119 98697738 -41619027 + L3 LINE CR1 81 750 -827 697 148 39 8 chr10 98697873 98698001 -41618764 - AluJb SINE Alu -180 132 1 21 36 0 0 chr10 98698324 98698352 -41618413 + AT_rich Low_complexity Low_complexity 1 28 0 499 165 122 17 chr10 98698466 98698581 -41618184 - FLAM_C SINE Alu -2 131 5 2124 117 3 3 chr10 98698887 98699187 -41617578 - AluSx SINE Alu -12 300 1 5381 170 11 10 chr10 98699188 98700095 -41616670 - L1M1 LINE L1 -6641 924 17 2677 160 39 50 chr10 98700095 98700462 -41616303 - Tigger1 DNA MER2_type -1884 534 173 2036 136 0 23 chr10 98700462 98700772 -41615993 + AluSq SINE Alu 1 303 -10 2677 160 39 50 chr10 98700772 98700943 -41615822 - Tigger1 DNA MER2_type -2245 173 2 1880 271 158 8 chr10 98700952 98701743 -41615022 - L1MEc LINE L1 -5453 943 34 3615 177 40 3 chr10 98702004 98702632 -41614133 + Tigger7 DNA MER2_type 2 652 -81 928 114 0 0 chr10 98702662 98702794 -41613971 + Tigger7 DNA MER2_type 2359 2490 -1 1498 214 109 54 chr10 98702857 98703416 -41613349 + L1ME2 LINE L1 5569 6334 0 868 129 0 0 chr10 98703474 98703590 -41613175 + FLAM_C SINE Alu 3 118 -25 216 0 0 0 chr10 98703648 98703672 -41613093 + (CA)n Simple_repeat Simple_repeat 2 25 0 1215 162 31 14 chr10 98704042 98704264 -41612501 - AluJb SINE Alu 0 312 87 46 19 0 0 chr10 98704468 98704521 -41612244 + AT_rich Low_complexity Low_complexity 1 53 0 1958 146 3 3 chr10 98705045 98705340 -41611425 - AluJb SINE Alu -17 295 1 1682 159 3 55 chr10 98705344 98705524 -41611241 - AluJo SINE Alu -2 310 153 2209 118 0 0 chr10 98705524 98705820 -41610945 - AluSx SINE Alu -16 296 1 1682 159 3 55 chr10 98705820 98705966 -41610799 - AluJo SINE Alu -159 153 1 24 0 0 0 chr10 98705975 98705999 -41610766 + AT_rich Low_complexity Low_complexity 1 24 0 191 364 127 17 chr10 98706060 98706178 -41610587 + MIR SINE MIR 19 149 -59 2060 134 0 3 chr10 98706318 98706617 -41610148 + AluSg SINE Alu 1 298 -12 595 242 16 8 chr10 98707214 98707342 -41609423 + FLAM_A SINE Alu 2 130 -3 249 293 0 0 chr10 98707381 98707439 -41609326 + CT-rich Low_complexity Low_complexity 3 60 0 704 10 0 87 chr10 98707836 98707939 -41608826 - L1PA2 LINE L1 0 6155 6062 1637 56 0 37 chr10 98708122 98708338 -41608427 - AluY SINE Alu -8 303 96 2411 70 10 0 chr10 98708423 98708725 -41608040 - AluY SINE Alu -6 305 1 233 229 0 0 chr10 98708731 98708779 -41607986 - HsTC2 DNA Tc2 -3 1895 1848 241 102 20 0 chr10 98708997 98709046 -41607719 - L1MA7 LINE L1 -5 6286 6237 2049 149 0 7 chr10 98709049 98709358 -41607407 - AluSx SINE Alu -1 311 5 1882 154 3 7 chr10 98709381 98709674 -41607091 - AluJb SINE Alu -18 294 3 2322 158 20 27 chr10 98709674 98710105 -41606660 - L1MA7 LINE L1 -44 6247 5818 570 312 37 23 chr10 98710207 98710425 -41606340 - MIR SINE MIR -13 249 29 349 241 47 65 chr10 98710733 98710903 -41605862 + L1MC4a LINE L1 5582 5748 -373 1920 130 3 3 chr10 98711000 98711317 -41605448 - AluSx SINE Alu 0 317 1 576 272 0 32 chr10 98711971 98712129 -41604636 + MIR SINE MIR 2 154 -108 1913 149 24 3 chr10 98712690 98712986 -41603779 + AluSx SINE Alu 2 303 -9 267 296 98 23 chr10 98713150 98713282 -41603483 + L1MC4a LINE L1 5775 5916 -1892 2346 88 0 7 chr10 98713434 98713731 -41603034 - AluSx SINE Alu -17 295 1 21 57 0 0 chr10 98713771 98713806 -41602959 + AT_rich Low_complexity Low_complexity 1 35 0 668 290 55 14 chr10 98714166 98714383 -41602382 - MIR SINE MIR -17 245 20 21 0 0 0 chr10 98714876 98714897 -41601868 + AT_rich Low_complexity Low_complexity 1 21 0 237 254 0 0 chr10 98714920 98714975 -41601790 - MIR SINE MIR -31 231 177 1983 123 27 3 chr10 98715223 98715516 -41601249 + AluSq SINE Alu 1 300 -13 329 265 97 17 chr10 98715606 98715781 -41600984 - L1M4c LINE L1 -4945 1335 1188 27 29 0 0 chr10 98715793 98715827 -41600938 + AT_rich Low_complexity Low_complexity 1 34 0 719 154 26 0 chr10 98715832 98715949 -41600816 - FLAM_C SINE Alu -23 120 1 459 243 29 50 chr10 98715954 98716213 -41600552 - L1ME LINE L1 -4683 2179 1506 23 0 0 0 chr10 98716213 98716236 -41600529 + AT_rich Low_complexity Low_complexity 1 23 0 357 303 56 62 chr10 98716261 98716618 -41600147 - L1ME LINE L1 -4955 1468 1114 2117 92 57 0 chr10 98716626 98716909 -41599856 - AluSx SINE Alu -11 301 3 693 167 0 76 chr10 98718184 98718328 -41598437 - FLAM_A SINE Alu 0 133 1 1978 157 0 22 chr10 98718733 98719052 -41597713 - AluSx SINE Alu 0 312 1 942 174 0 0 chr10 98719274 98719423 -41597342 - FRAM SINE Alu -30 146 1 188 274 59 0 chr10 98720508 98720559 -41596206 + L3 LINE CR1 1519 1572 -5 378 184 145 0 chr10 98721082 98721158 -41595607 + Charlie3 DNA MER1_type 1 87 -2623 1738 138 76 7 chr10 98721315 98721591 -41595174 + AluJo SINE Alu 1 295 -17 1142 133 6 12 chr10 98721743 98721916 -41594849 + AluSc SINE Alu 1 172 -137 915 104 8 0 chr10 98722157 98722282 -41594483 + AluSc SINE Alu 165 290 -19 335 311 68 11 chr10 98722385 98722562 -41594203 - LTR33A LTR ERVL -8 515 329 4134 167 21 0 chr10 98723290 98723961 -41592804 - ERVL LTR ERVL -3616 2148 1464 1398 157 14 0 chr10 98723961 98724012 -41592753 + AluJb SINE Alu 76 125 -187 207 69 0 0 chr10 98724012 98724041 -41592724 + (TA)n Simple_repeat Simple_repeat 1 29 0 1398 157 14 0 chr10 98724041 98724206 -41592559 + AluJb SINE Alu 125 295 -17 309 122 0 0 chr10 98724206 98724247 -41592518 - Tigger1 DNA MER2_type -963 1455 1415 36 0 0 0 chr10 98775317 98775353 -41541412 + AT_rich Low_complexity Low_complexity 1 36 0 183 114 0 0 chr10 98775470 98775505 -41541260 + (T)n Simple_repeat Simple_repeat 1 35 0 2068 88 67 17 chr10 98775507 98775804 -41540961 - AluSx SINE Alu 0 312 1 807 178 0 94 chr10 98775810 98776001 -41540764 - FRAM SINE Alu -12 164 1 2416 78 0 3 chr10 98776233 98776541 -41540224 - AluY SINE Alu -4 307 1 1899 135 14 10 chr10 98776826 98777115 -41539650 - AluSx SINE Alu -22 290 1 29 0 0 0 chr10 98777354 98777383 -41539382 + AT_rich Low_complexity Low_complexity 1 29 0 1266 93 33 133 chr10 98777384 98777566 -41539199 - L1MA2 LINE L1 0 6304 6162 2066 128 4 0 chr10 98777566 98777847 -41538918 - AluSx SINE Alu -30 282 1 1266 93 33 133 chr10 98777847 98777964 -41538801 - L1MA2 LINE L1 -142 6162 6035 27 29 0 0 chr10 98777968 98778002 -41538763 + AT_rich Low_complexity Low_complexity 1 34 0 511 176 0 10 chr10 98778558 98778660 -41538105 - AluJo SINE Alu -6 306 206 * 775 163 0 27 chr10 98778654 98778801 -41537964 - AluJo SINE Alu -169 143 1 2344 88 3 7 chr10 98778985 98779292 -41537473 + AluSp SINE Alu 1 306 -7 554 180 90 0 chr10 98779439 98779550 -41537215 + MER46A DNA MER2_type 26 146 -90 2429 72 0 3 chr10 98779801 98780107 -41536658 - AluY SINE Alu -6 305 1 25 0 0 0 chr10 98780116 98780141 -41536624 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 98780965 98780993 -41535772 + AT_rich Low_complexity Low_complexity 1 28 0 800 141 22 22 chr10 98781119 98781254 -41535511 - AluJo SINE Alu -177 135 1 1017 204 9 44 chr10 98781601 98781827 -41534938 - MER20 DNA MER1_type -1 218 1 492 202 101 36 chr10 98783156 98783324 -41533441 - L1ME2 LINE L1 -10 6154 5976 2168 112 7 0 chr10 98783786 98784081 -41532684 - AluSx SINE Alu -15 297 1 372 136 112 3 chr10 98784093 98784205 -41532560 - AluSp/q SINE Alu 0 303 235 1140 204 69 24 chr10 98784310 98784599 -41532166 - AluJb SINE Alu 0 302 1 2145 110 0 3 chr10 98785068 98785360 -41531405 + AluSg SINE Alu 1 291 -19 620 224 16 0 chr10 98786117 98786242 -41530523 - FLAM_C SINE Alu -6 127 1 274 242 36 79 chr10 98786291 98786315 -41530450 - L1MA10 LINE L1 0 6334 6311 689 217 21 85 chr10 98786315 98786550 -41530215 - L1ME2 LINE L1 -8 6156 5937 807 249 150 7 chr10 98786582 98786943 -41529822 - L1ME2 LINE L1 -311 5855 5423 208 0 0 0 chr10 98787645 98787668 -41529097 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1990 136 0 0 chr10 98787668 98787954 -41528811 - AluSx SINE Alu -26 286 1 305 280 119 8 chr10 98787966 98788084 -41528681 - L1MC4a LINE L1 -659 7149 7019 665 232 120 12 chr10 98788189 98788430 -41528335 - MER63B DNA MER1_type -126 310 44 743 223 19 6 chr10 98788438 98788595 -41528170 - AluJo SINE Alu -35 277 119 21 0 0 0 chr10 98788728 98788749 -41528016 + AT_rich Low_complexity Low_complexity 1 21 0 1345 225 160 8 chr10 98788749 98789273 -41527492 - L1ME2 LINE L1 -900 5246 4643 1537 187 4 15 chr10 98789480 98789753 -41527012 - AluJb SINE Alu -17 295 26 748 283 111 73 chr10 98789898 98790130 -41526635 + L1M4 LINE L1 4384 4606 -1540 2039 130 3 10 chr10 98790130 98790431 -41526334 + AluSx SINE Alu 1 299 -13 748 283 111 73 chr10 98790431 98791090 -41525675 + L1M4 LINE L1 4606 5309 -837 386 76 30 0 chr10 98792823 98792889 -41523876 - L1PB2 LINE L1 -2 6149 6082 558 274 223 27 chr10 98792974 98793270 -41523495 + L2 LINE L2 1190 1543 -1771 1481 265 229 15 chr10 98793320 98793940 -41522825 + L2 LINE L2 1765 2251 -1063 2113 117 19 13 chr10 98793940 98794247 -41522518 - AluSg SINE Alu -1 309 1 1847 156 24 0 chr10 98794247 98794541 -41522224 - AluSx SINE Alu -11 301 1 1481 265 229 15 chr10 98794541 98794592 -41522173 + L2 LINE L2 2545 2580 -734 834 271 86 85 chr10 98794773 98795207 -41521558 - HAL1 LINE L1 -301 2206 1774 2291 108 0 0 chr10 98795207 98795504 -41521261 - AluSq SINE Alu -16 297 1 834 271 86 85 chr10 98795504 98795765 -41521000 - HAL1 LINE L1 -733 1774 1507 1646 160 52 3 chr10 98795765 98796053 -41520712 - AluJb SINE Alu -10 302 1 834 271 86 85 chr10 98796053 98796191 -41520574 - HAL1 LINE L1 -1000 1507 1371 388 288 40 0 chr10 98796196 98796321 -41520444 - FLAM_A SINE Alu 0 133 4 1144 231 20 48 chr10 98796469 98796763 -41520002 - AluJo SINE Alu -18 294 9 340 304 127 42 chr10 98796858 98797260 -41519505 - HAL1 LINE L1 -1618 889 454 266 256 12 24 chr10 98797407 98797489 -41519276 - HAL1 LINE L1 -2309 198 118 2082 114 10 10 chr10 98797841 98798139 -41518626 - AluSx SINE Alu -7 305 8 840 181 120 114 chr10 98798758 98799057 -41517708 - AluJo SINE Alu -1 301 1 2371 104 3 0 chr10 98799133 98799442 -41517323 - AluSp SINE Alu -1 312 3 521 172 224 45 chr10 98800435 98800569 -41516196 + AluSc SINE Alu 135 292 -17 2047 123 7 13 chr10 98800712 98801012 -41515753 - AluSq SINE Alu -15 298 1 25 31 0 0 chr10 98801592 98801624 -41515141 + AT_rich Low_complexity Low_complexity 1 32 0 184 279 192 29 chr10 98801999 98802103 -41514662 + MIR SINE MIR 26 146 -62 286 175 124 82 chr10 98802329 98802426 -41514339 + MIR SINE MIR 124 224 -38 682 185 105 0 chr10 98802557 98802719 -41514046 + Charlie1 DNA MER1_type 40 218 -2543 313 224 153 0 chr10 98802713 98802811 -41513954 + Charlie1 DNA MER1_type 2619 2731 -30 * 1783 147 31 11 chr10 98802815 98803101 -41513664 + AluSx SINE Alu 1 292 -20 267 241 36 36 chr10 98803319 98803402 -41513363 - L1ME LINE L1 -547 5508 5426 368 301 140 16 chr10 98803413 98803606 -41513159 - L1ME LINE L1 -2808 3272 3056 475 280 67 16 chr10 98803671 98804043 -41512722 - L1ME LINE L1 -3111 2969 2579 266 333 14 27 chr10 98804607 98804754 -41512011 - L1ME1 LINE L1 -72 6094 5950 730 195 107 0 chr10 98804765 98804934 -41511831 + MER20 DNA MER1_type 1 187 -32 329 217 14 0 chr10 98804945 98805014 -41511751 - MLT1E LTR MaLR -523 70 1 252 312 56 8 chr10 98805192 98805317 -41511448 - L1ME LINE L1 -5145 925 795 2267 80 10 3 chr10 98805430 98805730 -41511035 - AluY SINE Alu -9 302 1 186 133 0 0 chr10 98806164 98806194 -41510571 + (CA)n Simple_repeat Simple_repeat 2 31 0 422 333 110 13 chr10 98806202 98806520 -41510245 - L1M4 LINE L1 -3528 2618 2270 2050 126 0 20 chr10 98806788 98806917 -41509848 + AluSx SINE Alu 10 140 -172 2132 122 24 0 chr10 98806917 98807211 -41509554 + AluSx SINE Alu 3 303 -9 2050 126 0 20 chr10 98807211 98807375 -41509390 + AluSx SINE Alu 140 297 -15 695 131 146 0 chr10 98807425 98807555 -41509210 + MER50-int LTR ERV1 10 158 -7047 1315 162 32 4 chr10 98807562 98807815 -41508950 - MER50 LTR ERV1 -23 711 452 1579 151 74 0 chr10 98807836 98808121 -41508644 - MER50 LTR ERV1 -428 306 1 1137 172 10 34 chr10 98808633 98808885 -41507880 - AluJo SINE Alu 0 333 87 849 176 85 21 chr10 98809044 98809232 -41507533 + MER34C LTR ERV1 6 205 -380 2346 133 25 0 chr10 98809232 98809631 -41507134 - MER84 LTR ERVI 0 507 99 9130 64 1 6 chr10 98809653 98811611 -41505154 - L1PA7 LINE L1 -9 6145 4177 5070 97 5 0 chr10 98811611 98812354 -41504411 + L1PA7 LINE L1 3434 4180 -1966 1167 151 61 5 chr10 98812357 98812569 -41504196 + MER30 DNA MER1_type 7 230 0 4278 92 19 48 chr10 98812577 98813261 -41503504 - MER4A LTR ERV1 0 664 1 616 101 20 10 chr10 98813261 98813360 -41503405 - MER84 LTR ERVI -407 100 1 694 204 303 14 chr10 98813360 98813654 -41503111 + MER34C LTR ERV1 201 579 -6 759 271 121 55 chr10 98813825 98813969 -41502796 + MER77 LTR ERV1 53 186 -419 1631 188 0 24 chr10 98813969 98814267 -41502498 + AluJo SINE Alu 1 291 -21 759 271 121 55 chr10 98814267 98814506 -41502259 + MER77 LTR ERV1 186 481 -124 4620 143 56 9 chr10 98814506 98815294 -41501471 + LTR1B LTR ERV1 2 826 0 759 271 121 55 chr10 98815294 98815421 -41501344 + MER77 LTR ERV1 481 598 -7 823 169 88 0 chr10 98815737 98815893 -41500872 - AluJo/FRAM SINE Alu 0 302 135 1809 164 10 17 chr10 98815895 98816194 -41500571 - AluJb SINE Alu -15 297 1 21 0 0 0 chr10 98816359 98816380 -41500385 + AT_rich Low_complexity Low_complexity 1 21 0 441 264 227 50 chr10 98816542 98816978 -41499787 - MLT1H LTR MaLR 0 549 37 227 171 40 26 chr10 98817249 98817325 -41499440 + T-rich Low_complexity Low_complexity 5 81 0 2559 112 36 48 chr10 98817626 98818230 -41498535 + MER4B LTR ERV1 1 766 0 6103 96 35 0 chr10 98818812 98820082 -41496683 - L1PA10 LINE L1 -16 6152 4850 1905 158 32 59 chr10 98820442 98820545 -41496220 - L1MA9 LINE L1 -36 6276 6172 1482 176 31 28 chr10 98820545 98820835 -41495930 - AluJo SINE Alu -21 291 1 1905 158 32 59 chr10 98820835 98821206 -41495559 - L1MA9 LINE L1 -140 6172 5815 40 67 0 0 chr10 98821206 98821281 -41495484 + AT_rich Low_complexity Low_complexity 1 75 0 195 150 40 20 chr10 98821299 98821399 -41495366 + (TA)n Simple_repeat Simple_repeat 2 103 0 252 167 0 0 chr10 98821462 98821510 -41495255 - L1MA9 LINE L1 -449 5734 5687 1618 148 146 34 chr10 98821510 98821846 -41494919 + MSTA LTR MaLR 9 393 -35 2285 118 0 0 chr10 98821846 98822152 -41494613 - AluSg SINE Alu -4 306 1 1618 148 146 34 chr10 98822152 98822193 -41494572 + MSTA LTR MaLR 393 428 0 7496 223 26 41 chr10 98822193 98822704 -41494061 + MSTA-int LTR MaLR 1 518 -1133 1935 142 0 10 chr10 98822704 98822993 -41493772 - AluSx SINE Alu -24 288 3 7496 223 26 41 chr10 98822993 98824156 -41492609 + MSTA-int LTR MaLR 518 1651 0 1166 144 124 19 chr10 98824156 98824413 -41492352 + MSTA LTR MaLR 1 284 -144 189 0 0 0 chr10 98824413 98824434 -41492331 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 30512 100 11 56 chr10 98824434 98830855 -41485910 - L1PA6 LINE L1 -16 6138 12 263 194 45 0 chr10 98831133 98831200 -41485565 + (TA)n Simple_repeat Simple_repeat 2 71 0 269 258 32 0 chr10 98831213 98831275 -41485490 + L2 LINE L2 3205 3268 -4 497 99 14 0 chr10 98832062 98832133 -41484632 - MLT1B LTR MaLR -318 72 1 715 289 26 0 chr10 98832133 98832399 -41484366 - L1ME3A LINE L1 -238 5932 5660 764 246 131 73 chr10 98832413 98832622 -41484143 - L1ME3A LINE L1 -984 5162 4967 2194 122 0 0 chr10 98832622 98832916 -41483849 - AluSg SINE Alu -16 294 1 764 246 131 73 chr10 98832916 98833195 -41483570 - L1ME3A LINE L1 -1179 4967 4706 1914 149 0 31 chr10 98833195 98833517 -41483248 + AluJo SINE Alu 1 312 0 764 246 131 73 chr10 98833517 98833715 -41483050 - L1ME3A LINE L1 -1440 4706 4435 1589 165 64 0 chr10 98833786 98834053 -41482712 + AluJb SINE Alu 14 297 -15 2075 90 61 0 chr10 98834055 98834333 -41482432 + AluSg SINE Alu 1 295 -15 26 30 0 0 chr10 98834346 98834379 -41482386 + AT_rich Low_complexity Low_complexity 1 33 0 1824 108 47 7 chr10 98836155 98836434 -41480331 - AluSx SINE Alu -22 290 1 255 152 0 0 chr10 98836698 98836744 -41480021 + T-rich Low_complexity Low_complexity 1 46 0 1510 180 0 0 chr10 98836744 98836989 -41479776 - AluSx SINE Alu -67 245 1 2715 146 33 33 chr10 98838625 98839140 -41477625 - L1MA7 LINE L1 0 6291 5777 1005 157 7 0 chr10 98839153 98839306 -41477459 + AluJb SINE Alu 136 289 -23 2105 126 20 23 chr10 98839317 98839666 -41477099 - L1MA7 LINE L1 -539 5752 5405 * 5950 110 13 1 chr10 98839665 98840521 -41476244 - L1PA10 LINE L1 -49 6119 5254 2889 102 59 0 chr10 98840602 98841006 -41475759 + MLT2A2 LTR ERVL 26 453 0 26711 95 9 3 chr10 98841007 98845260 -41471505 + ERVL-A2 LTR ERVL 2 4358 -1127 267 154 0 0 chr10 98845281 98845320 -41471445 - HERVL-C1 LTR ERVL -1260 4394 4356 5684 223 39 12 chr10 98845323 98846704 -41470061 - L1P LINE L1 -3790 2356 938 207 0 0 0 chr10 98846711 98846734 -41470031 + (TG)n Simple_repeat Simple_repeat 2 24 0 4971 55 22 0 chr10 98846754 98847339 -41469426 - L1PA5 LINE L1 -8 7584 6987 39220 71 2 30 chr10 98847339 98848906 -41467859 - L1PA5 LINE L1 -945 6639 5029 7603 53 9 0 chr10 98848906 98850120 -41466645 - L1PA5 LINE L1 -5 6149 4934 39220 71 2 30 chr10 98850120 98853895 -41462870 - L1PA5 LINE L1 -2555 5029 1449 3240 274 78 33 chr10 98853926 98855087 -41461678 - L1PA5 LINE L1 -6276 1305 92 1413 183 0 8 chr10 98855088 98855402 -41461363 - AluJo SINE Alu 0 384 73 984 134 12 0 chr10 98855403 98855567 -41461198 - L1 LINE L1 -1094 5052 4887 824 255 41 51 chr10 98855570 98855864 -41460901 - L1ME2 LINE L1 -34 6130 5840 * 903 214 17 43 chr10 98855856 98855983 -41460782 - L1ME2 LINE L1 -743 5403 5283 2015 141 3 3 chr10 98855983 98856280 -41460485 + AluSg SINE Alu 1 297 -13 903 214 17 43 chr10 98856280 98856386 -41460379 - L1ME2 LINE L1 -863 5283 5176 336 251 82 31 chr10 98856404 98856599 -41460166 - L1ME2 LINE L1 -1053 5093 4889 1687 185 19 43 chr10 98856716 98857089 -41459676 - MLT2C1 LTR ERVL -20 377 14 1077 203 61 27 chr10 98857104 98857595 -41459170 - ERVL-C1 LTR ERVL -7 5757 5219 2007 200 33 0 chr10 98857695 98858060 -41458705 - HERVL-C1 LTR ERVL -1838 3926 3550 * 4583 261 59 20 chr10 98858044 98860239 -41456526 - HERVL-C1 LTR ERVL -2955 2809 420 1620 185 3 23 chr10 98860239 98860547 -41456218 - AluJb SINE Alu -10 302 1 4583 261 59 20 chr10 98860547 98860984 -41455781 - HERVL-C1 LTR ERVL -5344 420 1 517 234 165 19 chr10 98860984 98861026 -41455739 - MLT2C1 LTR ERVL 0 397 362 378 0 0 0 chr10 98861026 98861068 -41455697 + (CA)n Simple_repeat Simple_repeat 2 43 0 517 234 165 19 chr10 98861068 98861183 -41455582 - MLT2C1 LTR ERVL -35 362 217 473 259 201 17 chr10 98861189 98861363 -41455402 - HERVL74 LTR ERVL -154 5531 5326 1016 201 5 15 chr10 98861366 98861570 -41455195 - MLT2C1 LTR ERVL -195 202 1 1034 97 16 75 chr10 98861635 98861821 -41454944 + L1MA7 LINE L1 6110 6284 -7 34 24 0 0 chr10 98861856 98861897 -41454868 + AT_rich Low_complexity Low_complexity 1 41 0 566 230 0 0 chr10 98861909 98862009 -41454756 + MLT1A1 LTR MaLR 157 256 -109 419 153 0 14 chr10 98862114 98862186 -41454579 + HERVL74 LTR ERVL 3571 3641 -2044 572 184 58 0 chr10 98862195 98862298 -41454467 + HERVL74 LTR ERVL 3897 4005 -1680 2062 164 0 0 chr10 98862355 98862667 -41454098 - AluJb SINE Alu 0 312 1 280 200 0 0 chr10 98862668 98862713 -41454052 + HERVL74 LTR ERVL 4029 4073 -1612 * 2554 215 50 82 chr10 98862704 98863116 -41453649 + HERVL74 LTR ERVL 4589 5013 -672 2000 169 86 3 chr10 98863116 98863453 -41453312 + MLT1A1 LTR MaLR 1 365 0 2554 215 50 82 chr10 98863453 98864016 -41452749 + HERVL74 LTR ERVL 5013 5641 -44 1863 255 44 31 chr10 98864037 98864559 -41452206 + MER74A LTR ERVL 6 534 -24 1320 301 59 26 chr10 98864614 98865409 -41451356 - L1M4 LINE L1 -1908 4238 3418 508 287 52 48 chr10 98865417 98865647 -41451118 - L1ME LINE L1 -5838 232 2 2285 153 28 46 chr10 98865824 98866218 -41450547 + MSTA LTR MaLR 1 388 -40 1845 176 3 3 chr10 98866218 98866530 -41450235 - AluSx SINE Alu 0 312 1 2285 153 28 46 chr10 98866530 98866566 -41450199 + MSTA LTR MaLR 388 423 -5 1063 95 82 0 chr10 98867169 98867316 -41449449 + AluSg/x SINE Alu 154 312 0 990 150 135 0 chr10 98867319 98867526 -41449239 + L1MC4 LINE L1 6855 7089 -953 548 111 0 0 chr10 98867583 98867655 -41449110 - AluSp/q SINE Alu -16 297 226 1589 265 44 19 chr10 98867658 98868182 -41448583 + L1MC4 LINE L1 7369 7905 -137 275 212 12 0 chr10 98868230 98868315 -41448450 + (TA)n Simple_repeat Simple_repeat 1 86 0 1971 245 101 35 chr10 98868360 98869132 -41447633 + L1ME3A LINE L1 5341 6163 -7 275 289 100 61 chr10 98869269 98869449 -41447316 + MIR3 SINE MIR 22 208 0 2327 210 61 14 chr10 98870112 98870683 -41446082 + L1MA9 LINE L1 5677 6274 -38 401 299 9 0 chr10 98871299 98871406 -41445359 + MIR SINE MIR 35 142 -66 3266 122 25 54 chr10 98871627 98872143 -41444622 - MER61D LTR ERV1 0 501 1 400 246 16 66 chr10 98872270 98872334 -41444431 + MER5B DNA MER1_type 1 59 -119 1497 138 170 0 chr10 98872334 98872601 -41444164 + AluSp SINE Alu 2 310 0 400 246 16 66 chr10 98872601 98872657 -41444108 + MER5B DNA MER1_type 59 116 -62 6146 160 72 31 chr10 98873084 98874053 -41442712 - L1MA6 LINE L1 0 6300 5372 261 0 0 0 chr10 98874053 98874082 -41442683 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1608 197 11 0 chr10 98874083 98874362 -41442403 - AluJo SINE Alu -30 282 1 6146 160 72 31 chr10 98874362 98875601 -41441164 - L1MA6 LINE L1 -927 5373 3992 196 173 58 19 chr10 98876239 98876291 -41440474 + MER5B DNA MER1_type 1 54 -124 237 326 155 26 chr10 98876426 98876619 -41440146 + MIR SINE MIR 24 241 -21 1114 149 36 0 chr10 98877353 98877547 -41439218 - L1MA4A LINE L1 0 6303 6103 29 47 0 0 chr10 98878243 98878286 -41438479 + AT_rich Low_complexity Low_complexity 1 43 0 783 234 19 34 chr10 98878362 98878578 -41438187 + MER74A LTR ERVL 1 267 -355 598 170 28 9 chr10 98878578 98878684 -41438081 + MER2 DNA MER2_type 1 108 -237 590 186 97 0 chr10 98878725 98878849 -41437916 + MER2 DNA MER2_type 209 344 -1 1514 215 13 69 chr10 98878849 98879226 -41437539 + MER74B LTR ERVL 267 622 0 1462 177 65 37 chr10 98879354 98879395 -41437370 + MSTA LTR MaLR 1 39 -336 17618 39 18 0 chr10 98879395 98882199 -41434566 + L1PA4 LINE L1 3325 6153 -2 1462 177 65 37 chr10 98882199 98882530 -41434235 + MSTA LTR MaLR 39 375 0 327 163 0 0 chr10 98882914 98882963 -41433802 - MSTB LTR MaLR -377 49 1 2030 169 5 22 chr10 98884167 98884535 -41432230 - L1PA3 LINE L1 0 6155 5794 387 96 0 0 chr10 98884535 98884587 -41432178 - L1P3 LINE L1 -4238 2223 2172 * 39362 59 5 1 chr10 98884585 98890664 -41426101 + L1PA4 LINE L1 61 6155 0 11774 123 15 40 chr10 98891065 98893247 -41423518 - L1P3 LINE L1 -4275 2186 8 571 190 88 84 chr10 98893287 98893513 -41423252 - L1M4 LINE L1 -5485 1057 831 23 33 0 0 chr10 98893537 98893567 -41423198 + AT_rich Low_complexity Low_complexity 1 30 0 398 100 0 14 chr10 98893573 98893643 -41423122 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 1018 305 70 59 chr10 98893663 98894203 -41422562 - L1M4 LINE L1 -5800 742 190 2754 90 13 0 chr10 98894203 98894581 -41422184 + L1PA10 LINE L1 5782 6164 -4 1018 305 70 59 chr10 98894581 98894772 -41421993 - L1M4 LINE L1 -6352 190 3 25 0 0 0 chr10 98895804 98895829 -41420936 + AT_rich Low_complexity Low_complexity 1 25 0 3448 199 42 44 chr10 98897628 98899038 -41417727 - L1MB7 LINE L1 -11 6173 4763 1455 195 39 7 chr10 98899038 98899320 -41417445 - AluSx SINE Alu -19 293 3 3448 199 42 44 chr10 98899320 98899621 -41417144 - L1MB7 LINE L1 -1421 4763 4463 242 122 0 0 chr10 98900093 98900134 -41416631 + MADE1 DNA Mariner 36 76 -4 1545 192 14 20 chr10 98900464 98900761 -41416004 - AluJb SINE Alu -15 297 3 908 192 35 15 chr10 98900761 98900877 -41415888 + MER2 DNA MER2_type 144 267 -78 1806 170 0 34 chr10 98900877 98901200 -41415565 - AluJo SINE Alu 0 312 1 908 192 35 15 chr10 98901200 98901281 -41415484 + MER2 DNA MER2_type 267 345 0 4581 156 12 21 chr10 98901281 98902128 -41414637 - L1MA7 LINE L1 -187 6104 5266 27 0 0 0 chr10 98902154 98902181 -41414584 + AT_rich Low_complexity Low_complexity 1 27 0 27648 55 3 2 chr10 98902234 98906583 -41410182 - L1PA5 LINE L1 0 6154 1802 5112 186 26 3 chr10 98906583 98907656 -41409109 - L1MA7 LINE L1 -1062 5084 3987 768 292 60 33 chr10 98907653 98908197 -41408568 - L1M3de LINE L1 -5532 1121 351 * 249 306 83 13 chr10 98908267 98908424 -41408341 - MLT1J LTR MaLR -2 509 342 1559 170 10 24 chr10 98908463 98908621 -41408144 - AluJb SINE Alu -19 293 139 2232 112 7 0 chr10 98908621 98908926 -41407839 - AluSx SINE Alu -5 307 1 1559 170 10 24 chr10 98908926 98909056 -41407709 - AluJb SINE Alu -173 139 9 22 35 0 0 chr10 98909418 98909447 -41407318 + AT_rich Low_complexity Low_complexity 1 29 0 2105 112 3 7 chr10 98910057 98910367 -41406398 - AluSx SINE Alu 0 309 1 24 0 0 0 chr10 98910442 98910466 -41406299 + AT_rich Low_complexity Low_complexity 1 24 0 2362 113 11 3 chr10 98910516 98910879 -41405886 - L1PB4 LINE L1 -2 6154 5789 1077 179 0 1 chr10 98910941 98911162 -41405603 - L1M2 LINE L1 -383 5773 5554 329 327 186 0 chr10 98911715 98911941 -41404824 + HAL1 LINE L1 378 645 -1862 639 230 32 32 chr10 98911981 98912168 -41404597 + HAL1 LINE L1 1332 1518 -989 699 272 116 72 chr10 98912185 98912946 -41403819 + HAL1 LINE L1 1623 2416 -91 687 264 20 40 chr10 98913743 98914042 -41402723 - L1M4 LINE L1 -1391 4755 4463 180 67 22 44 chr10 98914123 98914168 -41402597 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 567 221 62 0 chr10 98914178 98914291 -41402474 - FLAM_A SINE Alu -13 120 1 538 295 79 32 chr10 98914321 98914816 -41401949 - L1M4 LINE L1 -1785 4361 3844 349 311 22 7 chr10 98914850 98914985 -41401780 - L1M4 LINE L1 -2380 3766 3630 3461 62 20 2 chr10 98915254 98915706 -41401059 - L1PA7 LINE L1 -3 6151 5692 646 218 17 46 chr10 98915997 98916171 -41400594 + MER3 DNA MER1_type 27 195 -14 305 277 55 85 chr10 98916221 98916385 -41400380 + MER46C DNA MER2_type 10 164 -174 1875 192 0 0 chr10 98916385 98916697 -41400068 + AluJb SINE Alu 1 312 0 305 277 55 85 chr10 98916697 98916803 -41399962 + MER46C DNA MER2_type 164 272 -66 238 286 9 18 chr10 98916805 98916917 -41399848 + (TA)n Simple_repeat Simple_repeat 2 112 0 1329 279 97 24 chr10 98916936 98917639 -41399126 - L1MC4 LINE L1 -190 7852 7099 5269 170 41 17 chr10 98919691 98920150 -41396615 + L1PA16 LINE L1 4105 4551 -1615 2248 120 0 0 chr10 98920150 98920458 -41396307 + AluY SINE Alu 1 308 -3 5269 170 41 17 chr10 98920458 98921981 -41394784 + L1PA16 LINE L1 4551 6123 -43 297 287 66 33 chr10 98922192 98922314 -41394451 + MIR3 SINE MIR 68 193 -15 225 320 100 34 chr10 98923632 98923901 -41392864 - L2 LINE L2 -338 2976 2690 259 293 0 0 chr10 98924055 98924113 -41392652 + L2 LINE L2 3210 3267 -5 219 271 0 0 chr10 98924176 98924235 -41392530 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 231 309 12 0 chr10 98925578 98925659 -41391106 + (TA)n Simple_repeat Simple_repeat 2 83 0 1954 123 28 3 chr10 98925728 98926052 -41390713 - L1PA14 LINE L1 -1 6160 5829 1772 221 34 32 chr10 98926205 98926805 -41389960 - MER65-int LTR ERV1 -587 4284 3605 6370 191 17 6 chr10 98926840 98928993 -41387772 - L1PA15 LINE L1 -1 6164 3991 1877 226 6 38 chr10 98929051 98929525 -41387240 - L1PA15 LINE L1 -2137 4009 3551 600 154 39 0 chr10 98979534 98979638 -41337127 - L1M2 LINE L1 -6739 110 3 2170 206 47 22 chr10 98979639 98980148 -41336617 - L1M4c LINE L1 -5679 705 184 24 32 0 0 chr10 98980150 98980181 -41336584 + AT_rich Low_complexity Low_complexity 1 31 0 1312 120 5 10 chr10 98980181 98980373 -41336392 - AluSc SINE Alu -17 292 102 2729 164 28 54 chr10 98980373 98980868 -41335897 - Tigger3b DNA MER2_type -2465 563 84 2004 148 0 0 chr10 98980868 98981158 -41335607 - AluSx SINE Alu -22 290 1 2729 164 28 54 chr10 98981158 98981240 -41335525 - Tigger3b DNA MER2_type -2944 84 1 1250 187 42 0 chr10 98981250 98981539 -41335226 + L1MCa LINE L1 1688 1988 -4438 7865 246 39 32 chr10 98981645 98981719 -41335046 + L1MCa LINE L1 1930 2002 -4424 1968 125 4 0 chr10 98981719 98982021 -41334744 + AluSp SINE Alu 12 314 0 7865 246 39 32 chr10 98982021 98984474 -41332291 + L1MCa LINE L1 2002 4437 -1989 191 36 36 0 chr10 98984474 98984502 -41332263 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7865 246 39 32 chr10 98984502 98985251 -41331514 + L1MCa LINE L1 4437 5180 -1246 2039 124 3 7 chr10 98985251 98985558 -41331207 + AluY SINE Alu 1 306 -5 774 105 0 0 chr10 98985558 98985672 -41331093 + (TA)n Simple_repeat Simple_repeat 2 115 0 7865 246 39 32 chr10 98985672 98985730 -41331035 + L1MCa LINE L1 5179 5340 -1086 1288 97 11 11 chr10 98985831 98986016 -41330749 + AluY SINE Alu 111 295 -16 11840 130 5 18 chr10 98986016 98988178 -41328587 - L1P3 LINE L1 -4309 2152 9 7435 242 30 26 chr10 98988183 98988802 -41327963 - L1PBb LINE L1 -1748 4455 3839 3341 156 37 16 chr10 98988802 98989429 -41327336 - L1PA16 LINE L1 -4 6162 5523 7435 242 30 26 chr10 98989429 98991092 -41325673 - L1PBb LINE L1 -2364 3839 2146 2141 124 3 0 chr10 98991092 98991383 -41325382 + AluSp SINE Alu 1 292 -21 7435 242 30 26 chr10 98991383 98992447 -41324318 - L1PBb LINE L1 -4057 2146 1087 315 243 0 0 chr10 98992512 98992582 -41324183 + MER75B DNA T2_type 1 70 -173 1149 118 11 0 chr10 98993007 98993194 -41323571 + MER75B DNA T2_type 53 241 -2 823 225 5 0 chr10 98993225 98993428 -41323337 - L1PBb LINE L1 -5299 905 695 4411 260 36 19 chr10 98993431 98995288 -41321477 - L1PA15-16 LINE L1 -5298 1551 1 859 273 79 28 chr10 98995318 98995850 -41320915 - L1ME3A LINE L1 -220 5950 5392 1081 305 52 16 chr10 98996000 98996610 -41320155 - L1MC4 LINE L1 -151 7891 7260 2540 142 128 10 chr10 98996610 98997117 -41319648 + MER49 LTR ERV1 1 567 -356 285 276 0 0 chr10 98998351 98998427 -41318338 + (TGGA)n Simple_repeat Simple_repeat 4 79 0 200 289 0 0 chr10 99000068 99000113 -41316652 - MIR SINE MIR -68 140 96 541 283 68 37 chr10 99000507 99000995 -41315770 + L1MC4 LINE L1 7142 7644 -398 21 36 0 0 chr10 99001400 99001428 -41315337 + AT_rich Low_complexity Low_complexity 1 28 0 273 326 48 7 chr10 99001847 99001994 -41314771 + L1M4 LINE L1 3614 3766 -2380 298 257 7 15 chr10 99002042 99002178 -41314587 + L1M4 LINE L1 3890 4024 -2122 2903 9 0 0 chr10 99002441 99002757 -41314008 + AluYb8 SINE Alu 1 316 -2 550 296 56 41 chr10 99003004 99003633 -41313132 + L1M4 LINE L1 4027 4664 -1482 328 240 33 103 chr10 99004461 99004675 -41312090 - HAL1 LINE L1 -99 2408 2219 207 114 0 0 chr10 99004675 99004710 -41312055 + (CA)n Simple_repeat Simple_repeat 2 36 0 328 240 33 103 chr10 99004710 99004795 -41311970 - HAL1 LINE L1 -288 2219 2130 297 75 0 0 chr10 99004806 99004846 -41311919 + (CA)n Simple_repeat Simple_repeat 1 40 0 361 330 181 15 chr10 99004951 99005221 -41311544 - HAL1 LINE L1 -569 1938 1624 454 279 19 0 chr10 99005242 99005400 -41311365 - HAL1 LINE L1 -996 1511 1351 306 375 70 27 chr10 99005455 99005714 -41311051 - HAL1 LINE L1 -1860 647 378 1651 232 26 5 chr10 99007178 99007566 -41309199 - MSTD LTR MaLR 0 396 1 186 43 0 0 chr10 99007690 99007713 -41309052 + (A)n Simple_repeat Simple_repeat 1 23 0 1915 175 82 25 chr10 99007820 99008225 -41308540 + MSTA LTR MaLR 1 428 0 351 287 0 39 chr10 99008680 99008809 -41307956 + L1 LINE L1 3443 3566 -2580 374 361 73 85 chr10 99008834 99009233 -41307532 - L1M2 LINE L1 -6452 397 4 782 311 3 39 chr10 99009337 99009671 -41307094 - L1PBa LINE L1 -5440 1423 1102 1554 210 26 9 chr10 99009711 99010130 -41306635 + L1P LINE L1 4938 5363 -783 9287 186 163 34 chr10 99010136 99012522 -41304243 + L1 LINE L1 15 2707 -4858 522 152 10 0 chr10 99012520 99012619 -41304146 - L1P LINE L1 -1074 5072 4973 * 6263 206 24 3 chr10 99012620 99014147 -41302618 + L1 LINE L1 4267 5825 -1740 5847 60 1 0 chr10 99014149 99014882 -41301883 + L1PA8 LINE L1 5434 6167 -5 453 274 14 33 chr10 99014885 99015097 -41301668 + L1 LINE L1 3958 4165 -1981 1525 268 23 18 chr10 99015137 99015735 -41301030 + L1MC1 LINE L1 3777 4377 -1769 504 214 0 0 chr10 99015868 99015980 -41300785 + (CA)n Simple_repeat Simple_repeat 1 112 0 4357 217 40 2 chr10 99015981 99017240 -41299525 + L1MC1 LINE L1 5003 6314 -19 225 269 71 110 chr10 99017370 99017414 -41299351 + MIR3 SINE MIR 27 71 -137 2288 108 0 3 chr10 99017414 99017719 -41299046 + AluY SINE Alu 1 304 -7 225 269 71 110 chr10 99017719 99017856 -41298909 + MIR3 SINE MIR 71 201 -7 321 287 21 0 chr10 99018309 99018403 -41298362 + MIR SINE MIR 50 145 -63 335 348 32 26 chr10 99019184 99019339 -41297426 + MIR SINE MIR 35 190 -72 220 300 30 70 chr10 99019641 99019741 -41297024 + MER5B DNA MER1_type 1 96 -82 7761 31 2 2 chr10 99020439 99021336 -41295429 - MER11D LTR ERVK 0 897 1 233 266 116 40 chr10 99022474 99022543 -41294222 + MIR SINE MIR 53 115 -147 2207 125 0 19 chr10 99022543 99022854 -41293911 - AluSg SINE Alu -5 305 1 233 266 116 40 chr10 99022854 99022957 -41293808 + MIR SINE MIR 115 238 -24 21 36 0 0 chr10 99024214 99024242 -41292523 + AT_rich Low_complexity Low_complexity 1 28 0 6381 127 30 19 chr10 99024700 99025759 -41291006 - MER11C LTR ERVK 0 1071 1 6553 97 17 0 chr10 99025800 99027812 -41288953 + L1PA8 LINE L1 3985 6168 -4 2097 132 10 0 chr10 99028109 99028412 -41288353 + AluSp SINE Alu 1 306 -7 196 274 16 32 chr10 99029829 99029891 -41286874 + MIR SINE MIR 66 126 -82 23 0 0 0 chr10 99030273 99030296 -41286469 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 99030337 99030370 -41286395 + AT_rich Low_complexity Low_complexity 1 33 0 8608 104 66 0 chr10 99030700 99032096 -41284669 + L1PA7 LINE L1 3220 4707 -1439 5773 74 1 1 chr10 99032096 99032846 -41283919 + L1PA7 LINE L1 5388 6140 -14 3018 225 44 23 chr10 99033322 99034044 -41282721 - L1MB5 LINE L1 0 7195 6490 195 42 0 0 chr10 99034044 99034068 -41282697 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1952 149 0 0 chr10 99034068 99034350 -41282415 - AluSx SINE Alu -30 282 1 3018 225 44 23 chr10 99034350 99035059 -41281706 - L1MB5 LINE L1 -704 6491 5733 1324 181 33 21 chr10 99035061 99035565 -41281200 + LTR9 LTR ERV1 1 612 0 697 220 6 0 chr10 99035571 99035744 -41281021 - L1MB5 LINE L1 -1483 5684 5511 243 0 0 0 chr10 99035886 99035913 -41280852 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 17546 44 8 0 chr10 99035913 99038875 -41277890 - L1PA4 LINE L1 -11 6144 3162 20120 82 7 0 chr10 99038921 99041739 -41275026 - L1PA4 LINE L1 -3302 2844 7 4658 200 63 4 chr10 99041744 99043565 -41273200 - L1PA16 LINE L1 -8 6861 4932 8589 161 57 8 chr10 99043615 99045225 -41271540 - L1PA16 LINE L1 -3899 2950 1261 1594 236 33 26 chr10 99045216 99045759 -41271006 - L1MB5 LINE L1 -1813 5354 4808 * 34 24 0 0 chr10 99045761 99045802 -41270963 + AT_rich Low_complexity Low_complexity 1 41 0 736 200 6 6 chr10 99045808 99045978 -41270787 - L1MB3 LINE L1 -7 6176 6007 729 200 0 0 chr10 99045980 99046110 -41270655 + FLAM_C SINE Alu 1 130 -13 2038 156 10 28 chr10 99046416 99046813 -41269952 - L1MB3 LINE L1 -159 6024 5635 1078 114 0 7 chr10 99046819 99046968 -41269797 - AluSg SINE Alu -162 148 1 12130 115 11 4 chr10 99046968 99048871 -41267894 - L1P3 LINE L1 -2291 4170 2255 10331 142 64 23 chr10 99048878 99050877 -41265888 - L1P3 LINE L1 -4375 2086 1 3961 224 14 10 chr10 99050880 99051711 -41265054 - L1MB5 LINE L1 -5044 2124 1290 2054 158 0 0 chr10 99053387 99053698 -41263067 + AluSx SINE Alu 1 311 -1 1975 192 13 5 chr10 99054366 99054747 -41262018 - L1PA16 LINE L1 -4 6162 5779 1035 125 6 6 chr10 99054747 99055015 -41261750 - THE1B LTR MaLR -7 357 1 3075 126 7 35 chr10 99055015 99055561 -41261204 - L1PA16 LINE L1 -374 5792 5262 277 336 85 31 chr10 99055852 99056111 -41260654 + HAL1 LINE L1 378 650 -1857 312 310 21 7 chr10 99056162 99056304 -41260461 + HAL1 LINE L1 1351 1494 -1013 761 289 108 42 chr10 99056339 99057080 -41259685 + HAL1 LINE L1 1627 2416 -91 23 54 0 0 chr10 99057263 99057300 -41259465 + AT_rich Low_complexity Low_complexity 1 37 0 14193 190 20 10 chr10 99057334 99058736 -41258029 - L1MA1 LINE L1 0 7721 6334 2171 141 28 3 chr10 99058736 99059091 -41257674 - THE1B LTR MaLR 0 364 1 14193 190 20 10 chr10 99059091 99061929 -41254836 - L1MA1 LINE L1 -1387 6334 3431 546 279 37 37 chr10 99062485 99062757 -41254008 - L1M4 LINE L1 -1394 4752 4481 552 276 56 38 chr10 99062877 99063268 -41253497 - L1M4 LINE L1 -1854 4292 3895 2038 192 33 21 chr10 99063270 99063691 -41253074 - MSTB LTR MaLR 0 426 1 230 312 56 16 chr10 99063768 99063893 -41252872 - L1M4 LINE L1 -2403 3743 3614 28 29 0 0 chr10 99064302 99064337 -41252428 + AT_rich Low_complexity Low_complexity 1 35 0 1006 230 113 13 chr10 99064905 99065205 -41251560 - MER58B DNA MER1_type 0 341 12 418 295 53 19 chr10 99065269 99065476 -41251289 - L1M4 LINE L1 -1031 5115 4902 32 0 0 0 chr10 99065603 99065635 -41251130 + AT_rich Low_complexity Low_complexity 1 32 0 816 293 79 49 chr10 99065711 99066445 -41250320 - L1MC4 LINE L1 -188 7854 7099 194 378 11 0 chr10 99066852 99066942 -41249823 + MIR3 SINE MIR 93 183 -25 1952 160 129 8 chr10 99068132 99068513 -41248252 - MSTA LTR MaLR 0 428 2 1187 233 56 51 chr10 99068569 99068925 -41247840 - MLT1A1 LTR MaLR -7 358 1 264 245 0 0 chr10 99069479 99069528 -41247237 + L2 LINE L2 3216 3264 -8 408 158 0 0 chr10 99069598 99069674 -41247091 + (TCCA)n Simple_repeat Simple_repeat 3 78 0 2192 114 0 0 chr10 99070637 99070927 -41245838 - AluY SINE Alu -21 290 1 2058 148 0 0 chr10 99071091 99071411 -41245354 - AluSq SINE Alu 0 313 1 250 154 15 31 chr10 99071770 99071835 -41244930 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 594 226 111 42 chr10 99072115 99072305 -41244460 - MLT1D LTR MaLR -120 385 183 2760 170 26 21 chr10 99072309 99072875 -41243890 - LTR10A LTR ERV1 -21 612 1 11074 207 38 19 chr10 99072876 99075404 -41241361 - LTR10A-int LTR ERV1 -1 7784 5306 1866 117 4 0 chr10 99075404 99075660 -41241105 - AluSg SINE Alu -52 258 2 11074 207 38 19 chr10 99075660 99076902 -41239863 - LTR10A-int LTR ERV1 -2479 5306 1808 372 214 167 0 chr10 99076904 99076988 -41239777 + LTR8 LTR ERV1 156 253 -438 3975 174 9 48 chr10 99076990 99078096 -41238669 - HERVI LTR ERV1 -3202 4112 956 641 262 11 27 chr10 99078076 99078259 -41238506 - HERVI LTR ERV1 -4468 3317 3138 * 1145 140 116 2 chr10 99078256 99078740 -41238025 - HERVI LTR ERV1 -3962 2687 546 975 242 36 18 chr10 99078894 99079175 -41237590 - HERVI LTR ERV1 -6360 289 4 2807 158 19 54 chr10 99079176 99079765 -41237000 - LTR10A LTR ERV1 -21 612 1 229 214 179 0 chr10 99079769 99079825 -41236940 - MLT1D LTR MaLR -325 180 115 404 289 20 26 chr10 99079842 99079994 -41236771 - MIR SINE MIR -105 157 7 369 301 63 14 chr10 99080003 99080146 -41236619 + L2 LINE L2 3162 3311 -2 559 298 87 25 chr10 99080441 99080683 -41236082 - MIR SINE MIR -4 258 2 2368 172 92 8 chr10 99080861 99081360 -41235405 - LTR1B LTR ERV1 -1 825 285 21 82 0 0 chr10 99081391 99081440 -41235325 + AT_rich Low_complexity Low_complexity 1 49 0 1427 274 77 16 chr10 99081464 99082168 -41234597 + L1MEc LINE L1 484 1230 -5166 2598 46 0 0 chr10 99082221 99082525 -41234240 + AluY SINE Alu 1 304 -7 8255 188 19 72 chr10 99082568 99085124 -41231641 + L1M1 LINE L1 3220 5627 -1938 2365 118 3 0 chr10 99085124 99085481 -41231284 - L1PB1 LINE L1 0 6151 5794 546 16 0 0 chr10 99085482 99085545 -41231220 + (TA)n Simple_repeat Simple_repeat 1 63 0 324 0 0 0 chr10 99085703 99085739 -41231026 + (TA)n Simple_repeat Simple_repeat 1 36 0 7187 181 2 12 chr10 99085739 99087807 -41228958 - L1PB1 LINE L1 -370 5781 3734 243 0 0 0 chr10 99088838 99088865 -41227900 + (TA)n Simple_repeat Simple_repeat 1 27 0 318 352 70 15 chr10 99088887 99089088 -41227677 - MIR SINE MIR -12 250 37 187 231 96 0 chr10 99089179 99089231 -41227534 - MIR SINE MIR -74 188 132 252 86 0 0 chr10 99089263 99089298 -41227467 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3971 108 8 5 chr10 99089298 99090509 -41226256 - L1PA8 LINE L1 -24 6148 4764 402 294 49 86 chr10 99091771 99092016 -41224749 + HAL1 LINE L1 110 345 -2162 763 307 32 5 chr10 99092172 99092576 -41224189 - L1MCa LINE L1 -2539 3676 3262 1786 245 63 14 chr10 99092582 99093607 -41223158 - L1MCa LINE L1 -3947 2268 1280 353 287 0 0 chr10 99093632 99093726 -41223039 - L1ME3A LINE L1 -8 6162 6069 2484 198 9 13 chr10 99093835 99094366 -41222399 - L1PB4 LINE L1 -11 6145 5617 13301 109 5 22 chr10 99094372 99095413 -41221352 - L1P LINE L1 -1248 4898 3841 1740 177 0 3 chr10 99095413 99095715 -41221050 - AluSg SINE Alu 0 301 1 13301 109 5 22 chr10 99095715 99096426 -41220339 - L1P LINE L1 -2305 3841 3185 7680 28 0 0 chr10 99096426 99097874 -41218891 - L1PA3 LINE L1 -3 6152 4705 13301 109 5 22 chr10 99097874 99098227 -41218538 - L1P LINE L1 -2961 3185 2827 257 0 30 0 chr10 99098270 99098303 -41218462 + (TTA)n Simple_repeat Simple_repeat 3 36 0 34667 114 9 14 chr10 99098303 99099016 -41217749 - L1PA6 LINE L1 -18 6136 5421 2335 78 0 34 chr10 99099016 99099336 -41217429 - AluY SINE Alu -2 309 1 34667 114 9 14 chr10 99099336 99104783 -41211982 - L1PA6 LINE L1 -733 5421 11 4992 97 11 1 chr10 99104794 99105526 -41211239 - L1P LINE L1 -3305 2841 2103 2895 238 70 41 chr10 99105668 99105871 -41210894 + L1MB5 LINE L1 4320 4516 -1658 556 65 0 0 chr10 99105871 99105948 -41210817 + L1PA3 LINE L1 6074 6150 -5 2895 238 70 41 chr10 99105948 99106740 -41210025 + L1MB5 LINE L1 4516 5284 -890 1551 210 0 10 chr10 99106740 99107054 -41209711 + AluJo SINE Alu 1 311 -1 2895 238 70 41 chr10 99107054 99107756 -41209009 + L1MB5 LINE L1 5284 6083 -91 2127 177 68 7 chr10 99107756 99108214 -41208551 - MER66B LTR ERV1 0 486 1 2895 238 70 41 chr10 99108214 99108308 -41208457 + L1MB5 LINE L1 6083 6173 -1 1216 239 52 24 chr10 99108294 99108663 -41208102 + L1M4 LINE L1 4537 4915 -1231 * 40233 61 4 1 chr10 99109583 99115517 -41201248 - L1PA5 LINE L1 -7 6147 193 45 0 0 0 chr10 99115899 99115944 -41200821 + AT_rich Low_complexity Low_complexity 1 45 0 315 0 0 0 chr10 99117052 99117087 -41199678 + (GA)n Simple_repeat Simple_repeat 1 35 0 * 324 0 0 0 chr10 99117086 99117122 -41199643 + (TG)n Simple_repeat Simple_repeat 2 37 0 329 320 53 10 chr10 99118785 99118997 -41197768 - MIR SINE MIR -4 258 38 260 333 10 0 chr10 99119096 99119192 -41197573 - MER5B DNA MER1_type -81 97 1 2282 102 0 10 chr10 99119711 99120025 -41196740 + AluY SINE Alu 1 311 0 311 271 56 19 chr10 99120529 99120636 -41196129 - MER5B DNA MER1_type -67 111 1 191 175 18 0 chr10 99120917 99120974 -41195791 + (TA)n Simple_repeat Simple_repeat 2 59 0 224 162 44 15 chr10 99121099 99121167 -41195598 + (TA)n Simple_repeat Simple_repeat 2 71 0 258 371 31 3 chr10 99121196 99121333 -41195432 - MIR SINE MIR -64 144 13 305 300 20 0 chr10 99122112 99122212 -41194553 - MIR SINE MIR -112 150 49 215 323 87 43 chr10 99122626 99122787 -41193978 - MIR3 SINE MIR 0 208 41 4597 211 44 28 chr10 99122940 99124318 -41192447 - L1MC2 LINE L1 -9 6335 4940 996 168 10 0 chr10 99124330 99124527 -41192238 + L1 LINE L1 5133 5331 -815 1197 243 19 0 chr10 99124546 99124859 -41191906 - L1 LINE L1 -1024 5122 4804 1788 137 38 0 chr10 99124951 99125265 -41191500 - L1MA2 LINE L1 0 7723 7398 235 98 118 0 chr10 99125283 99125334 -41191431 + L1MA1 LINE L1 5964 6020 -282 4686 163 10 8 chr10 99125340 99126947 -41189818 - L1MA2 LINE L1 -345 7378 5768 5324 218 23 10 chr10 99127060 99128327 -41188438 + L1 LINE L1 2629 3911 -2235 240 35 0 0 chr10 99128339 99128368 -41188397 + (TTCCC)n Simple_repeat Simple_repeat 5 33 0 769 172 8 22 chr10 99128386 99128520 -41188245 - FLAM_C SINE Alu -1 132 1 2991 169 21 31 chr10 99128520 99129440 -41187325 - L1MA2 LINE L1 -3546 4019 3119 2274 99 3 3 chr10 99129441 99129745 -41187020 + AluY SINE Alu 1 304 -7 42210 39 23 1 chr10 99129747 99135639 -41181126 + L1PA3 LINE L1 1 6021 -134 12828 183 88 38 chr10 99135638 99138528 -41178237 - L1MA2 LINE L1 -4429 3136 9 * 473 220 34 0 chr10 99138580 99138698 -41178067 - LTR54B LTR ERV1 -369 129 8 4572 231 25 18 chr10 99138698 99140000 -41176765 + L1MA6 LINE L1 4001 5311 -835 10139 67 5 0 chr10 99140003 99142087 -41174678 + L1PA6 LINE L1 4065 6152 -2 657 240 58 0 chr10 99142614 99142785 -41173980 + MIR SINE MIR 82 262 0 182 37 37 0 chr10 99142807 99142834 -41173931 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 876 144 56 6 chr10 99143385 99143565 -41173200 + L1MA7 LINE L1 6102 6290 -1 4515 167 31 4 chr10 99143577 99144402 -41172363 + L1PA16 LINE L1 5319 6166 0 1368 264 106 19 chr10 99144425 99144990 -41171775 - MER57A-int LTR ERV1 -360 7177 6564 1946 269 35 7 chr10 99144990 99145562 -41171203 - MER57A-int LTR ERV1 -1125 6412 5825 785 227 13 26 chr10 99145872 99146101 -41170664 - MER57A-int LTR ERV1 -1717 5820 5595 5260 225 27 20 chr10 99146161 99147310 -41169455 - L1M1 LINE L1 -6283 1282 126 2929 243 19 52 chr10 99147365 99148188 -41168577 - MER57A-int LTR ERV1 -6740 797 2 1847 239 5 2 chr10 99148189 99148591 -41168174 - MER57A LTR ERV1 0 403 1 453 315 78 16 chr10 99148982 99149290 -41167475 - MER46C DNA MER2_type -1 337 11 655 241 6 29 chr10 99149332 99149502 -41167263 - MER3 DNA MER1_type 0 209 44 465 149 0 0 chr10 99149607 99149708 -41167057 - AluSg/x SINE Alu 0 308 208 6037 39 5 1 chr10 99150036 99150778 -41165987 + L1PA3 LINE L1 5406 6150 -5 912 285 97 38 chr10 99150860 99151113 -41165652 + L1M4 LINE L1 3608 3844 -2302 3671 186 40 15 chr10 99151113 99151910 -41164855 + L1MA6 LINE L1 5484 6300 0 912 285 97 38 chr10 99151910 99152724 -41164041 + L1M4 LINE L1 3844 4739 -1407 3322 216 29 16 chr10 99153110 99154202 -41162563 + L1MB8 LINE L1 4462 5569 -615 2419 208 21 5 chr10 99154269 99154850 -41161915 + L1MB8 LINE L1 5584 6173 -5 36838 95 11 8 chr10 99155732 99161852 -41154913 - L1PA6 LINE L1 -13 6141 11 1591 215 117 20 chr10 99162260 99162749 -41154016 + LTR64 LTR ERVK 23 558 0 21 36 0 0 chr10 99163011 99163039 -41153726 + AT_rich Low_complexity Low_complexity 1 28 0 237 110 55 41 chr10 99163280 99163353 -41153412 + (TTTA)n Simple_repeat Simple_repeat 1 74 0 12362 162 20 22 chr10 99163359 99166948 -41149817 - L1MA1 LINE L1 -7 6295 2711 32 43 0 0 chr10 99167102 99167148 -41149617 + AT_rich Low_complexity Low_complexity 1 46 0 262 312 30 13 chr10 99167305 99167419 -41149346 - MIR SINE MIR -46 162 49 258 305 25 51 chr10 99167835 99167953 -41148812 - MIR3 SINE MIR -1 207 93 6384 147 28 1 chr10 99168119 99169993 -41146772 - L1PA10 LINE L1 0 6483 4563 9494 202 20 43 chr10 99169997 99173210 -41143555 - L1PA10 LINE L1 -3267 3194 2 3142 189 12 15 chr10 99173388 99174040 -41142725 - L1PA12 LINE L1 -4792 2789 2140 878 149 5 48 chr10 99174199 99174407 -41142358 - LTR9-int LTR ERV1 -3671 4145 3947 * 4294 186 8 5 chr10 99174406 99175157 -41141608 - LTR9-int LTR ERV1 -1950 6969 6217 32439 135 20 7 chr10 99175162 99179272 -41137493 - LTR9-int LTR ERV1 -2849 6070 2012 1852 130 137 6 chr10 99179272 99179594 -41137171 + THE1B LTR MaLR 1 364 0 10765 129 7 4 chr10 99179594 99181170 -41135595 + THE1B-int LTR MaLR 1 1580 0 2072 116 47 47 chr10 99181172 99181534 -41135231 + THE1B LTR MaLR 3 364 0 32439 135 20 7 chr10 99181534 99182368 -41134397 - LTR9-int LTR ERV1 -6907 2012 1061 1806 43 0 4 chr10 99182368 99182679 -41134086 - L1P2 LINE L1 -681 5473 5164 4181 50 30 7 chr10 99182679 99183215 -41133550 + L1PA5 LINE L1 5593 6141 -13 4530 181 24 67 chr10 99183241 99184333 -41132432 - LTR9-int LTR ERV1 -6351 1067 23 2688 194 19 61 chr10 99184355 99184994 -41131771 - LTR9 LTR ERV1 0 612 1 506 261 19 6 chr10 99184994 99185155 -41131610 - L1MDa LINE L1 -3412 3436 3274 259 269 48 8 chr10 99185155 99185279 -41131486 - L1MDa LINE L1 -904 2305 2205 328 314 25 0 chr10 99185647 99185765 -41131000 - L1MDa LINE L1 -5163 1685 1565 564 277 0 0 chr10 99185893 99186023 -41130742 - FLAM_A SINE Alu -11 131 2 335 322 7 0 chr10 99186077 99186229 -41130536 - L1ME3 LINE L1 -8 6154 6002 3719 117 78 45 chr10 99186313 99191712 -41125053 + L1PA7 LINE L1 4 5223 -931 3719 75 52 0 chr10 99191712 99191786 -41124979 + L1PA7 LINE L1 5607 5676 -478 279 0 0 0 chr10 99191786 99191817 -41124948 + (CA)n Simple_repeat Simple_repeat 2 32 0 3719 75 52 0 chr10 99191817 99192263 -41124502 + L1PA7 LINE L1 5676 6154 0 * 5883 107 12 25 chr10 99192236 99193414 -41123351 + L1PA11 LINE L1 5006 6174 0 3719 117 78 45 chr10 99192263 99193482 -41123283 + L1PA7 LINE L1 5223 6154 0 1767 218 43 31 chr10 99193931 99194514 -41122251 - L1MB3 LINE L1 0 6183 5594 1413 181 30 30 chr10 99194919 99195197 -41121568 + L1MB3 LINE L1 5833 6113 -70 1685 143 94 34 chr10 99195197 99195548 -41121217 - THE1C LTR MaLR 0 375 4 1413 181 30 30 chr10 99195548 99195607 -41121158 + L1MB3 LINE L1 6112 6170 -13 353 298 56 51 chr10 99195636 99195783 -41120982 + MIR SINE MIR 6 156 -106 1559 203 126 49 chr10 99195783 99196252 -41120513 + MLT1D LTR MaLR 1 505 0 353 298 56 51 chr10 99196252 99196319 -41120446 + MIR SINE MIR 156 221 -41 202 312 52 13 chr10 99196349 99196426 -41120339 - L2 LINE L2 -210 3103 3024 22 35 0 0 chr10 99196517 99196546 -41120219 + AT_rich Low_complexity Low_complexity 1 29 0 277 318 18 0 chr10 99197007 99197117 -41119648 + (TATATG)n Simple_repeat Simple_repeat 4 115 0 41192 45 1 2 chr10 99198095 99204253 -41112512 + L1PA3 LINE L1 13 6165 0 20546 37 6 3 chr10 99204426 99207746 -41109019 + L1PA4 LINE L1 2827 6142 -13 13918 96 7 1 chr10 99207782 99210653 -41106112 + L1PA6 LINE L1 3288 6154 0 505 128 21 11 chr10 99210653 99210741 -41106024 - MLT2B1 LTR ERVL -431 89 1 2283 185 35 10 chr10 99211251 99211543 -41105222 - L1MD1 LINE L1 -21 6221 5930 241 340 51 32 chr10 99211543 99211796 -41104969 - L1MA4 LINE L1 -373 5927 5670 1856 73 0 0 chr10 99212026 99212273 -41104492 - L1P2 LINE L1 -391 5763 5517 * 12498 82 6 4 chr10 99212268 99214103 -41102662 - L1P2 LINE L1 -1236 4910 3072 3375 49 5 0 chr10 99214134 99214561 -41102204 - L1PA4 LINE L1 -1 6154 5726 7075 52 20 0 chr10 99214561 99216280 -41100485 + L1PA5 LINE L1 4446 6154 0 507 88 0 25 chr10 99216308 99216388 -41100377 + MER9 LTR ERVK 358 435 -76 10576 90 8 0 chr10 99216402 99218669 -41098096 + L1PA7 LINE L1 3867 6154 0 1399 194 57 18 chr10 99218745 99219024 -41097741 - AluJo SINE Alu -8 304 15 211 118 0 39 chr10 99219267 99219318 -41097447 + (GGGGA)n Simple_repeat Simple_repeat 1 49 0 263 285 78 64 chr10 99219892 99220250 -41096515 + L1M4 LINE L1 2523 2885 -3261 295 268 62 70 chr10 99220818 99221090 -41095675 + MER113 DNA MER1_type? 92 361 -160 215 286 16 0 chr10 99221282 99221345 -41095420 + MIR SINE MIR 38 101 -161 627 279 88 7 chr10 99222463 99222757 -41094008 + MLT1I LTR MaLR 82 399 -10 504 271 73 38 chr10 99222792 99223034 -41093731 + MIR SINE MIR 4 252 -10 12761 30 4 1 chr10 99223967 99226286 -41090479 - L1PA4 LINE L1 0 6155 3840 327 301 26 7 chr10 99226385 99226538 -41090227 + MIR SINE MIR 53 208 -54 278 282 32 57 chr10 99226642 99226766 -41089999 + L2 LINE L2 3193 3313 0 671 268 22 6 chr10 99226771 99226950 -41089815 + MIR SINE MIR 31 212 -50 929 42 0 0 chr10 99227720 99227838 -41088927 + L1PA4 LINE L1 6035 6152 -3 2064 78 7 7 chr10 99227873 99228157 -41088608 + L1PB1 LINE L1 5864 6147 -4 1803 150 84 15 chr10 99228164 99228558 -41088207 + MER65A LTR ERV1 21 441 -4 468 258 36 84 chr10 99228651 99228926 -41087839 + MER65A-int LTR ERV1 89 350 -4521 5829 197 70 58 chr10 99229030 99230387 -41086378 + MER65A-int LTR ERV1 597 1984 -2887 187 53 26 26 chr10 99230387 99230425 -41086340 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 5829 197 70 58 chr10 99230425 99230943 -41085822 + MER65A-int LTR ERV1 1984 2494 -2377 1727 182 7 3 chr10 99230994 99231291 -41085474 + AluJo SINE Alu 5 302 -10 22 0 0 0 chr10 99231302 99231324 -41085441 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 99231428 99231456 -41085309 + AT_rich Low_complexity Low_complexity 1 28 0 2005 116 0 4 chr10 99231456 99231723 -41085042 + AluSx SINE Alu 23 288 -24 604 140 53 109 chr10 99231732 99231997 -41084768 + MER31-int LTR ERV1 1644 1893 -6227 270 146 56 139 chr10 99232001 99232145 -41084620 + MER31-int LTR ERV1 3350 3481 -3117 684 162 10 66 chr10 99232409 99232606 -41084159 + MER31-int LTR ERV1 3545 3730 -2868 434 205 122 71 chr10 99232818 99233167 -41083598 + MER31-int LTR ERV1 2706 3038 -1898 883 200 119 47 chr10 99233209 99233529 -41083236 + MER31-int LTR ERV1 4304 4646 -1685 332 227 0 7 chr10 99233535 99233629 -41083136 + L1PB4 LINE L1 6076 6166 0 786 234 122 19 chr10 99233709 99234097 -41082668 + MER31-int LTR ERV1 3520 3970 -966 23 0 0 0 chr10 99234597 99234620 -41082145 + GC_rich Low_complexity Low_complexity 1 23 0 1684 104 4 8 chr10 99235168 99235417 -41081348 + AluSx SINE Alu 49 296 -16 2721 174 28 2 chr10 99236187 99237148 -41079617 + L1MB8 LINE L1 4800 5791 -509 433 186 0 0 chr10 99237162 99237248 -41079517 + L1MB8 LINE L1 6087 6172 -6 1054 169 51 7 chr10 99238200 99238463 -41078302 - L1PA16 LINE L1 -2 6161 5863 471 229 47 41 chr10 99241205 99241375 -41075390 - L1ME1 LINE L1 -91 6075 5905 * 2793 168 37 13 chr10 99241361 99241987 -41074778 + L1 LINE L1 3847 4487 -1659 838 298 108 29 chr10 99242948 99243303 -41073462 + MLT1J LTR MaLR 1 395 -116 2271 149 111 102 chr10 99243303 99243532 -41073233 + MLT2B3 LTR ERVL 1 226 -328 234 0 0 0 chr10 99243532 99243558 -41073207 + (TG)n Simple_repeat Simple_repeat 2 27 0 2271 149 111 102 chr10 99243558 99243877 -41072888 + MLT2B3 LTR ERVL 226 554 0 838 298 108 29 chr10 99243877 99243937 -41072828 + MLT1J LTR MaLR 395 449 -62 234 0 0 0 chr10 99244544 99244570 -41072195 + (A)n Simple_repeat Simple_repeat 1 26 0 773 326 4 4 chr10 99245523 99245781 -41070984 + MIR SINE MIR 5 262 0 233 313 152 25 chr10 99245981 99246179 -41070586 - L2 LINE L2 -214 3058 2836 287 243 40 14 chr10 99246245 99246319 -41070446 + MIR SINE MIR 78 153 -55 196 290 29 29 chr10 99247119 99247188 -41069577 - MIR3 SINE MIR -1 207 139 415 296 106 54 chr10 99247527 99247895 -41068870 - L1ME1 LINE L1 -277 5844 5458 3569 195 21 80 chr10 99247913 99248942 -41067823 - LTR5 LTR ERVK 0 969 1 2115 109 10 3 chr10 99249090 99249384 -41067381 + AluSx SINE Alu 3 298 -14 7611 31 5 0 chr10 99249584 99251349 -41065416 + L1PA4 LINE L1 4503 6275 0 312 294 5 29 chr10 99251402 99251610 -41065155 + GA-rich Low_complexity Low_complexity 1 202 0 3241 144 32 4 chr10 99251904 99252405 -41064360 - L1PB4 LINE L1 -14 6142 5628 405 269 126 0 chr10 99253051 99253170 -41063595 + MIR SINE MIR 46 179 -83 262 150 22 0 chr10 99253307 99253353 -41063412 + MIR SINE MIR 103 150 -58 1783 159 3 51 chr10 99253362 99253676 -41063089 + AluSx SINE Alu 3 301 -11 3595 117 14 0 chr10 99253716 99254203 -41062562 + MER1A DNA MER1_type 36 529 0 225 0 0 0 chr10 99254576 99254601 -41062164 + (A)n Simple_repeat Simple_repeat 1 25 0 404 292 102 71 chr10 99254893 99254989 -41061776 + L1M4 LINE L1 4753 4845 -1301 2123 96 3 17 chr10 99254989 99255282 -41061483 + AluSx SINE Alu 1 289 -23 404 292 102 71 chr10 99255282 99255606 -41061159 + L1M4 LINE L1 4845 5186 -960 1901 201 45 11 chr10 99255976 99256329 -41060436 - MLT1A1 LTR MaLR 0 365 1 184 366 16 32 chr10 99256605 99256715 -41060050 + MIR3 SINE MIR 86 195 -13 2487 169 29 15 chr10 99256715 99257171 -41059594 - L1MB7 LINE L1 -15 6169 5708 184 366 16 32 chr10 99257171 99257183 -41059582 + MIR3 SINE MIR 195 206 -2 239 114 68 0 chr10 99258503 99258547 -41058218 + L1PB4 LINE L1 5786 5832 -336 2325 90 0 0 chr10 99258587 99258875 -41057890 + AluSx SINE Alu 11 298 -14 2183 119 9 24 chr10 99258877 99259205 -41057560 + L1PB4 LINE L1 5830 6152 -4 1881 145 116 0 chr10 99259285 99259588 -41057177 + MER44D DNA MER2_type 1 608 -1 234 0 0 0 chr10 99259653 99259679 -41057086 + (A)n Simple_repeat Simple_repeat 1 26 0 781 298 105 22 chr10 99259679 99260291 -41056474 - L2 LINE L2 -71 3242 2564 449 224 8 52 chr10 99260292 99260426 -41056339 + MER96B DNA MER1_type? 1 128 -289 41 87 0 0 chr10 99260454 99260558 -41056207 + AT_rich Low_complexity Low_complexity 1 104 0 287 125 0 0 chr10 99260582 99260622 -41056143 + MER58A DNA MER1_type 37 76 -31 878 199 0 22 chr10 99260769 99260950 -41055815 - MER96B DNA MER1_type? -240 177 1 198 284 10 129 chr10 99260952 99261153 -41055612 - L2 LINE L2 -746 2568 2392 217 203 0 31 chr10 99262299 99262363 -41054402 + (TTAA)n Simple_repeat Simple_repeat 3 64 0 319 266 243 35 chr10 99263052 99263221 -41053544 - MIR SINE MIR -52 210 7 529 407 83 10 chr10 99265797 99266399 -41050366 - L2 LINE L2 -1747 1567 922 1572 198 8 78 chr10 99266407 99266643 -41050122 - MLT1A2 LTR MaLR 0 374 174 1229 220 7 42 chr10 99266643 99266952 -41049813 - AluJo SINE Alu -13 299 2 1572 198 8 78 chr10 99266952 99267098 -41049667 - MLT1A2 LTR MaLR -200 174 19 486 366 78 26 chr10 99267109 99267532 -41049233 - L2 LINE L2 -2565 749 305 2362 91 3 3 chr10 99267787 99268095 -41048670 + AluSc SINE Alu 1 308 -1 235 286 0 0 chr10 99269028 99269098 -41047667 - MLT1K LTR MaLR -4 584 515 186 385 0 0 chr10 99269651 99269716 -41047049 - L2 LINE L2 -39 3233 3169 270 200 0 0 chr10 99269717 99269762 -41047003 + Alu SINE Alu 1 45 -255 862 234 149 44 chr10 99270045 99270570 -41046195 - L1MC5 LINE L1 -196 7765 7186 314 318 95 0 chr10 99271535 99271661 -41045104 - L1M4 LINE L1 -2196 3950 3813 982 206 43 73 chr10 99271799 99272024 -41044741 + L1 LINE L1 3148 3355 -2791 2128 132 3 0 chr10 99272024 99272328 -41044437 + AluSq SINE Alu 1 305 -8 982 206 43 73 chr10 99272328 99272524 -41044241 + L1 LINE L1 3355 3556 -2590 * 2393 159 19 68 chr10 99272516 99273058 -41043707 + L1 LINE L1 3866 4380 -1766 2188 117 3 0 chr10 99273060 99273358 -41043407 + AluSx SINE Alu 1 299 -13 1668 219 26 28 chr10 99273358 99273746 -41043019 + L1MA10 LINE L1 5942 6328 -6 357 62 0 0 chr10 99273863 99273911 -41042854 + (CA)n Simple_repeat Simple_repeat 2 49 0 2915 210 65 32 chr10 99273911 99274773 -41041992 + L1M4 LINE L1 3503 4392 -1754 367 315 87 42 chr10 99274806 99275095 -41041670 + MARNA DNA Mariner 271 572 -14 2244 65 61 0 chr10 99275142 99275419 -41041346 - AluSp SINE Alu -19 294 1 521 284 96 23 chr10 99275637 99275855 -41040910 - MIR SINE MIR -27 235 2 1820 252 87 32 chr10 99276263 99277006 -41039759 - L1MC4 LINE L1 -71 7971 7177 1808 169 0 26 chr10 99277006 99277314 -41039451 + AluJb SINE Alu 1 300 -12 1820 252 87 32 chr10 99277314 99277402 -41039363 - L1MC4 LINE L1 -865 7177 7095 643 239 147 48 chr10 99277453 99277708 -41039057 - L1ME4a LINE L1 -4 6117 5889 2013 122 42 0 chr10 99277708 99277994 -41038771 - AluSx SINE Alu -14 298 1 643 239 147 48 chr10 99277994 99278220 -41038545 - L1ME4a LINE L1 -232 5889 5588 2094 105 7 20 chr10 99278505 99278809 -41037956 + AluSx SINE Alu 1 300 -12 313 357 29 12 chr10 99279024 99279195 -41037570 - MIR SINE MIR 0 262 89 230 260 82 0 chr10 99279738 99279811 -41036954 - L1ME LINE L1 -228 5893 5815 382 229 49 66 chr10 99279834 99279859 -41036906 - L1ME3 LINE L1 -32 6130 6106 2729 80 128 5 chr10 99279859 99280258 -41036507 + LTR7 LTR ERV1 1 448 -2 382 229 49 66 chr10 99280258 99280354 -41036411 - L1ME3 LINE L1 -56 6106 6011 259 224 52 0 chr10 99280552 99280610 -41036155 - L1MC4a LINE L1 -1104 6704 6644 1212 213 34 8 chr10 99280786 99281049 -41035716 - L1ME3 LINE L1 -166 5996 5727 3694 58 0 7 chr10 99281911 99282362 -41034403 + LTR7 LTR ERV1 1 448 -2 1967 104 40 27 chr10 99282595 99282894 -41033871 - AluSq SINE Alu -10 303 1 529 234 23 23 chr10 99282959 99283087 -41033678 - MIR SINE MIR -107 155 28 1156 350 51 17 chr10 99283220 99283988 -41032777 - HERVL LTR ERVL -832 4822 4029 576 288 50 37 chr10 99284030 99284353 -41032412 - HERVL LTR ERVL -1342 3654 3328 440 302 97 18 chr10 99284467 99284840 -41031925 - HERVL LTR ERVL -2024 3461 3048 607 152 12 92 chr10 99284890 99285011 -41031754 + MER33 DNA MER1_type 2 131 -2454 1825 163 24 3 chr10 99285011 99285306 -41031459 + AluJo SINE Alu 1 301 -11 2385 89 0 0 chr10 99285314 99285607 -41031158 + AluSg SINE Alu 1 293 -17 607 152 12 92 chr10 99285607 99285715 -41031050 + MER33 DNA MER1_type 138 324 0 195 258 32 97 chr10 99285724 99285817 -41030948 - L2 LINE L2 -2 3270 3184 257 272 44 89 chr10 99285908 99286066 -41030699 - L2 LINE L2 -181 3091 2941 2378 113 0 0 chr10 99286268 99286578 -41030187 - AluSx SINE Alu -1 311 2 2411 67 0 3 chr10 99287775 99288074 -41028691 + AluY SINE Alu 1 298 -13 345 214 14 0 chr10 99289525 99289595 -41027170 + MIR SINE MIR 81 151 -57 6874 83 12 9 chr10 99289604 99290232 -41026533 + L1PA11 LINE L1 4659 5283 -891 2188 128 0 0 chr10 99290232 99290529 -41026236 + AluSx SINE Alu 1 297 -15 6874 83 12 9 chr10 99290529 99291391 -41025374 + L1PA11 LINE L1 5283 6171 -3 768 149 82 0 chr10 99291626 99291760 -41025005 - MER5A DNA MER1_type -28 161 17 359 228 87 0 chr10 99291970 99292062 -41024703 - FLAM_A SINE Alu -1 132 33 1009 181 135 0 chr10 99292157 99292350 -41024415 + MER20 DNA MER1_type 1 219 0 545 154 49 105 chr10 99293010 99293122 -41023643 + MER96B DNA MER1_type? 264 366 -51 2193 79 31 7 chr10 99293122 99293413 -41023352 + AluSx SINE Alu 1 298 -14 545 154 49 105 chr10 99293413 99293462 -41023303 + MER96B DNA MER1_type? 366 416 -1 2409 167 19 9 chr10 99294419 99294844 -41021921 + L1MB3 LINE L1 5743 6171 -12 307 310 160 3 chr10 99295056 99295235 -41021530 - MIR SINE MIR -52 210 4 2128 140 0 0 chr10 99295336 99295643 -41021122 + AluSx SINE Alu 1 307 -5 421 275 43 77 chr10 99295871 99296078 -41020687 + MLT1J LTR MaLR 111 310 -201 249 326 61 0 chr10 99297287 99297419 -41019346 - MIR SINE MIR -54 208 69 246 105 0 0 chr10 99297757 99297795 -41018970 + (TC)n Simple_repeat Simple_repeat 2 39 0 1673 171 7 17 chr10 99298967 99299266 -41017499 - AluJo SINE Alu -16 296 1 635 286 143 8 chr10 99299457 99299842 -41016923 + L2 LINE L2 2839 3275 -38 233 240 20 0 chr10 99300362 99300412 -41016353 + CT-rich Low_complexity Low_complexity 5 55 0 23 0 0 0 chr10 99301064 99301087 -41015678 + AT_rich Low_complexity Low_complexity 1 23 0 1220 156 71 19 chr10 99302023 99302235 -41014530 + AluSx SINE Alu 1 223 -89 8272 195 147 28 chr10 99302439 99304145 -41012620 + L1MDa LINE L1 28 2175 -4365 1643 142 0 4 chr10 99304145 99304392 -41012373 + AluSq SINE Alu 55 300 -13 8272 195 147 28 chr10 99304392 99305351 -41011414 + L1MDa LINE L1 2175 3018 -3522 1672 159 48 11 chr10 99305354 99305625 -41011140 + AluJb SINE Alu 2 282 -30 252 86 0 0 chr10 99305625 99305660 -41011105 + (TAAG)n Simple_repeat Simple_repeat 1 35 0 7739 180 28 36 chr10 99305661 99306618 -41010147 + L1MDa LINE L1 3681 4645 -1895 333 0 0 0 chr10 99306618 99306655 -41010110 + (CA)n Simple_repeat Simple_repeat 2 38 0 7739 180 28 36 chr10 99306655 99307407 -41009358 + L1MDa LINE L1 4645 5379 -1161 1807 173 0 11 chr10 99307407 99307758 -41009007 + AluSx SINE Alu 1 348 0 7739 180 28 36 chr10 99307758 99307828 -41008937 + L1MDa LINE L1 5379 5448 -1092 801 128 90 15 chr10 99307829 99307962 -41008803 + FLAM_C SINE Alu 1 143 0 3034 150 63 11 chr10 99307962 99308629 -41008136 + L1MB2 LINE L1 5454 6163 -402 1944 129 71 31 chr10 99308629 99308979 -41007786 - THE1B LTR MaLR 0 364 1 3034 150 63 11 chr10 99308979 99309039 -41007726 + L1MB2 LINE L1 6163 6218 -347 1389 103 0 29 chr10 99309039 99309243 -41007522 + AluSg/x SINE Alu 106 303 -6 1345 174 119 13 chr10 99309243 99309553 -41007212 + L1MB2 LINE L1 6222 6564 -1 2019 129 52 42 chr10 99309568 99309994 -41006771 + L1MD1 LINE L1 5807 6236 -6 727 279 8 11 chr10 99310809 99311039 -41005726 - MIR SINE MIR -3 259 30 213 100 0 50 chr10 99311183 99311223 -41005542 + L2 LINE L2 3267 3304 -9 2458 84 3 0 chr10 99312448 99312757 -41004008 + AluSp SINE Alu 1 310 -3 492 237 86 103 chr10 99313116 99313407 -41003358 + MER102a DNA MER1_type 44 329 -1 2046 132 0 7 chr10 99313586 99313882 -41002883 + AluJb SINE Alu 5 298 -14 279 305 69 0 chr10 99314332 99314463 -41002302 - MIR SINE MIR -17 245 106 2554 71 7 0 chr10 99316034 99316342 -41000423 + AluSp SINE Alu 1 310 -3 1517 167 53 7 chr10 99316354 99316636 -41000129 + AluJo SINE Alu 1 295 -17 2088 142 7 0 chr10 99316638 99316948 -40999817 + AluSx SINE Alu 1 312 0 222 250 198 9 chr10 99317251 99317367 -40999398 + MIR SINE MIR 107 244 -18 29 47 0 0 chr10 99318057 99318100 -40998665 + AT_rich Low_complexity Low_complexity 1 43 0 2511 88 0 0 chr10 99320011 99320318 -40996447 + AluSx SINE Alu 1 307 -5 3695 54 5 0 chr10 99320320 99320767 -40995998 + L1PA6 LINE L1 5483 5931 -223 1952 129 3 21 chr10 99320869 99321156 -40995609 - AluSx SINE Alu -30 282 1 2200 116 3 0 chr10 99321877 99322169 -40994596 - AluSx SINE Alu -19 293 1 2513 86 0 0 chr10 99322274 99322576 -40994189 + AluSx SINE Alu 1 302 -10 318 290 14 22 chr10 99323066 99323204 -40993561 - MIR SINE MIR -51 211 75 21 71 0 0 chr10 99323470 99323512 -40993253 + AT_rich Low_complexity Low_complexity 1 42 0 1991 128 54 7 chr10 99323515 99323812 -40992953 + AluSx SINE Alu 1 311 -1 224 220 119 0 chr10 99324605 99324664 -40992101 + MIR3 SINE MIR 138 203 -5 304 264 166 54 chr10 99325279 99325413 -40991352 + L2 LINE L2 2925 3043 -270 2406 69 3 13 chr10 99325413 99325716 -40991049 - AluSq SINE Alu -13 300 1 304 264 166 54 chr10 99325716 99325858 -40990907 + L2 LINE L2 3043 3232 -81 3346 128 98 40 chr10 99325871 99326548 -40990217 + LTR8A LTR ERV1 12 727 0 296 188 78 0 chr10 99326548 99326612 -40990153 + L2 LINE L2 3243 3311 -2 339 278 79 1 chr10 99327256 99327388 -40989377 - MIR SINE MIR -66 142 2 515 243 128 13 chr10 99327710 99327945 -40988820 - MIR SINE MIR 0 262 1 252 0 0 0 chr10 99328016 99328044 -40988721 + (A)n Simple_repeat Simple_repeat 1 28 0 1885 146 10 13 chr10 99328050 99328352 -40988413 + AluJb SINE Alu 1 301 -11 1848 118 0 78 chr10 99328457 99328753 -40988012 + AluSx SINE Alu 1 273 -39 216 0 0 0 chr10 99328760 99328784 -40987981 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 360 332 61 0 chr10 99329254 99329450 -40987315 + MIR SINE MIR 1 208 -54 259 303 152 11 chr10 99329495 99329673 -40987092 - L2 LINE L2 -42 3230 3028 192 77 0 0 chr10 99329736 99329762 -40987003 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 674 306 83 0 chr10 99330110 99330362 -40986403 + Charlie8 DNA MER1_type 4 276 -2141 2169 104 7 10 chr10 99331213 99331512 -40985253 + AluSx SINE Alu 1 298 -14 221 316 34 40 chr10 99332004 99332181 -40984584 + MER5B DNA MER1_type 1 176 -2 1411 198 51 14 chr10 99332415 99332708 -40984057 + AluJo SINE Alu 1 304 -8 772 154 0 29 chr10 99332771 99332907 -40983858 - AluJo SINE Alu -176 136 5 2128 109 0 14 chr10 99333777 99334061 -40982704 + AluSx SINE Alu 1 280 -32 582 242 90 11 chr10 99334163 99334341 -40982424 + MIR SINE MIR 71 262 0 21 36 0 0 chr10 99334341 99334369 -40982396 + AT_rich Low_complexity Low_complexity 1 28 0 396 289 79 7 chr10 99334375 99334527 -40982238 - MIR SINE MIR -48 214 52 1552 260 86 19 chr10 99334828 99335101 -40981664 - L1ME3A LINE L1 -10 6160 5907 315 0 0 0 chr10 99335101 99335136 -40981629 + (TG)n Simple_repeat Simple_repeat 2 36 0 1552 260 86 19 chr10 99335136 99335397 -40981368 - L1ME3A LINE L1 -263 5907 5590 22 0 0 0 chr10 99335403 99335425 -40981340 + AT_rich Low_complexity Low_complexity 1 22 0 2280 116 0 0 chr10 99335479 99335773 -40980992 - AluSq SINE Alu -19 294 1 211 263 83 4 chr10 99336581 99336758 -40980007 + MIR SINE MIR 8 262 0 702 237 76 40 chr10 99336768 99337017 -40979748 + MIR SINE MIR 5 262 0 2120 121 0 0 chr10 99337206 99337488 -40979277 + AluSx SINE Alu 13 294 -18 24 0 0 0 chr10 99338778 99338802 -40977963 + AT_rich Low_complexity Low_complexity 1 24 0 268 218 109 129 chr10 99338988 99339236 -40977529 + L1ME3A LINE L1 5839 6081 -89 201 340 130 0 chr10 99339954 99340054 -40976711 + L2 LINE L2 3140 3252 -20 206 207 17 17 chr10 99340068 99340126 -40976639 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 28 29 0 0 chr10 99341765 99341800 -40974965 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 99342128 99342150 -40974615 + GC_rich Low_complexity Low_complexity 1 22 0 261 230 14 40 chr10 99342674 99342748 -40974017 - MIR SINE MIR -63 145 74 835 242 154 21 chr10 99343070 99343305 -40973460 + L2 LINE L2 2743 2945 -368 1781 149 13 29 chr10 99343305 99343614 -40973151 + AluJb SINE Alu 1 304 -8 835 242 154 21 chr10 99343614 99343870 -40972895 + L2 LINE L2 2945 3296 -17 215 250 62 0 chr10 99343941 99344005 -40972760 + L2 LINE L2 3193 3260 -12 2425 75 3 3 chr10 99344164 99344469 -40972296 + AluSp SINE Alu 1 305 -8 556 267 92 18 chr10 99344950 99345229 -40971536 + L1MC4 LINE L1 5572 5818 -303 2449 80 3 0 chr10 99345461 99345762 -40971003 - AluSx SINE Alu -10 302 1 1590 171 4 0 chr10 99347363 99347637 -40969128 + AluJo SINE Alu 1 275 -37 920 285 106 35 chr10 99347765 99348133 -40968632 + LTR16A LTR ERVL 57 450 0 503 280 33 20 chr10 99349419 99349569 -40967196 - L2 LINE L2 -2 3311 3160 2094 248 57 40 chr10 99349569 99349977 -40966788 + L1MC4 LINE L1 6596 7023 -1019 2186 101 3 3 chr10 99349977 99350284 -40966481 + AluSx SINE Alu 1 307 -5 2094 248 57 40 chr10 99350284 99350593 -40966172 + L1MC4 LINE L1 7023 7325 -717 1723 150 75 52 chr10 99350598 99350847 -40965918 - MLT1A1 LTR MaLR 0 365 104 2300 85 10 0 chr10 99350847 99351153 -40965612 + AluSg SINE Alu 2 310 0 1723 150 75 52 chr10 99351153 99351249 -40965516 - MLT1A1 LTR MaLR -261 104 12 613 116 21 0 chr10 99351253 99351348 -40965417 - MLT1A1 LTR MaLR 0 396 300 966 161 30 45 chr10 99351357 99351556 -40965209 - MLT1A1 LTR MaLR -169 196 1 753 199 84 38 chr10 99351587 99351849 -40964916 + L1MC4 LINE L1 7350 7623 -419 1480 169 0 0 chr10 99351849 99352092 -40964673 + AluJb SINE Alu 1 243 -69 1548 139 4 0 chr10 99352095 99352333 -40964432 + AluSx SINE Alu 60 298 -14 904 201 15 5 chr10 99352335 99352534 -40964231 + L1MC4 LINE L1 7698 7898 -144 240 281 18 53 chr10 99352573 99352687 -40964078 + L1MC4 LINE L1 7912 8021 -21 24 0 0 0 chr10 99352710 99352734 -40964031 + AT_rich Low_complexity Low_complexity 1 24 0 281 343 89 12 chr10 99352846 99353015 -40963750 - MIR SINE MIR -76 186 5 193 304 0 18 chr10 99353177 99353233 -40963532 - L2 LINE L2 -80 3233 3179 721 251 59 25 chr10 99353528 99353731 -40963034 + MIR SINE MIR 47 256 -6 1739 166 3 7 chr10 99354125 99354420 -40962345 + AluJb SINE Alu 7 300 -12 1581 202 150 6 chr10 99354713 99355059 -40961706 + MSTD LTR MaLR 1 396 0 416 268 57 0 chr10 99355915 99356038 -40960727 + MIR SINE MIR 121 250 -12 446 82 14 27 chr10 99356445 99356518 -40960247 + L1PB4 LINE L1 6082 6153 -3 681 202 0 8 chr10 99357009 99357128 -40959637 - FLAM_A SINE Alu -14 119 2 261 83 0 0 chr10 99357142 99357178 -40959587 + (A)n Simple_repeat Simple_repeat 1 36 0 739 299 110 11 chr10 99358828 99359092 -40957673 + L3 LINE CR1 207 496 -1081 1096 182 53 0 chr10 99359246 99359455 -40957310 + MER58A DNA MER1_type 1 220 -4 341 284 74 0 chr10 99359488 99359583 -40957182 + L2 LINE L2 3171 3272 0 1261 279 92 24 chr10 99359594 99360096 -40956669 + L3 LINE CR1 564 1099 -478 958 241 140 9 chr10 99360268 99360583 -40956182 - L1MC4a LINE L1 -1879 5929 5574 206 318 217 8 chr10 99360583 99360712 -40956053 + L3 LINE CR1 1087 1242 -335 498 271 72 34 chr10 99360774 99360981 -40955784 - MIR SINE MIR -32 230 16 349 254 109 67 chr10 99361020 99361185 -40955580 - MER5B DNA MER1_type -6 172 1 845 196 62 11 chr10 99361198 99361377 -40955388 - MER5A DNA MER1_type 0 189 2 327 237 132 35 chr10 99361650 99361764 -40955001 + L2 LINE L2 3189 3313 0 1975 121 0 7 chr10 99361856 99362145 -40954620 + AluSx SINE Alu 1 287 -25 429 316 23 8 chr10 99362148 99362281 -40954484 + L3 LINE CR1 1363 1497 -80 189 375 29 29 chr10 99362397 99362501 -40954264 + MIR SINE MIR 48 151 -57 226 324 0 27 chr10 99362763 99362837 -40953928 - L2 LINE L2 -1 3271 3200 2471 74 0 0 chr10 99363351 99363663 -40953102 + AluSx SINE Alu 1 312 0 254 313 12 0 chr10 99364201 99364281 -40952484 - MER5A DNA MER1_type 0 189 109 297 286 0 0 chr10 99364397 99364467 -40952298 - MIR3 SINE MIR -48 160 91 206 257 200 19 chr10 99364762 99364867 -40951898 + L2 LINE L2 3148 3271 -1 246 277 181 0 chr10 99365070 99365153 -40951612 + L2 LINE L2 3201 3298 -15 362 292 25 8 chr10 99365884 99366004 -40950761 - MIR SINE MIR -62 146 25 339 266 115 36 chr10 99366328 99366520 -40950245 + MIR SINE MIR 1 207 -55 180 333 57 0 chr10 99366843 99366948 -40949817 + MIR SINE MIR 39 149 -113 491 328 134 6 chr10 99367137 99367451 -40949314 + MLT1L LTR MaLR 167 520 -95 238 186 47 0 chr10 99367462 99367505 -40949260 + MER91B DNA MER1_type 33 77 -113 2392 143 78 14 chr10 99367552 99367977 -40948788 + LTR47A LTR ERVL 1 452 0 282 215 15 15 chr10 99368083 99368148 -40948617 + MER5A DNA MER1_type 125 189 0 2108 114 0 0 chr10 99368810 99369116 -40947649 - AluSg SINE Alu -4 306 1 228 313 148 57 chr10 99369544 99369774 -40946991 + L2 LINE L2 3022 3272 0 242 143 20 0 chr10 99369776 99369825 -40946940 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 248 337 43 0 chr10 99369838 99369930 -40946835 - L2 LINE L2 -203 3069 2974 245 239 45 0 chr10 99370181 99370248 -40946517 + L1MC/D LINE L1 5817 5886 -1922 436 302 9 0 chr10 99370351 99370457 -40946308 + MER94 DNA DNA 11 117 -17 382 213 27 0 chr10 99371509 99371584 -40945181 + MER94 DNA DNA 7 83 -51 201 216 0 0 chr10 99371921 99371958 -40944807 - L2 LINE L2 -3 3269 3233 203 296 80 56 chr10 99372127 99372252 -40944513 + L2 LINE L2 3145 3272 0 1778 146 28 0 chr10 99372552 99372840 -40943925 + AluJb SINE Alu 1 296 -16 819 148 0 0 chr10 99373450 99373578 -40943187 + AluJb SINE Alu 174 301 -11 334 235 29 0 chr10 99373938 99374006 -40942759 - MER20 DNA MER1_type 0 219 150 21 0 0 0 chr10 99375543 99375564 -40941201 + AT_rich Low_complexity Low_complexity 1 21 0 180 152 0 0 chr10 99376534 99376567 -40940198 + T-rich Low_complexity Low_complexity 1 33 0 1785 159 3 3 chr10 99377319 99377621 -40939144 - AluJb SINE Alu -10 302 1 790 268 104 4 chr10 99377764 99378014 -40938751 + MER102b DNA MER1_type 67 341 0 428 132 15 0 chr10 99378080 99378148 -40938617 - AluS SINE Alu -18 292 224 942 201 88 15 chr10 99378302 99378506 -40938259 - MER20 DNA MER1_type 0 219 1 771 247 74 21 chr10 99378604 99378823 -40937942 + MIR SINE MIR 35 262 0 381 193 134 22 chr10 99379146 99379287 -40937478 + MIR3 SINE MIR 39 194 -14 287 284 132 46 chr10 99379451 99379648 -40937117 + MIR SINE MIR 34 247 -15 231 258 79 11 chr10 99379707 99379796 -40936969 + L2 LINE L2 2958 3052 -220 227 294 106 38 chr10 99380834 99381069 -40935696 + L2 LINE L2 2920 3170 -102 954 114 0 0 chr10 99382350 99382520 -40934245 + AluSp/q SINE Alu 155 324 0 282 186 17 17 chr10 99382554 99382613 -40934152 - Charlie7 DNA MER1_type 0 2612 2554 486 332 75 60 chr10 99382850 99383236 -40933529 - L2 LINE L2 0 3272 2881 1855 140 27 0 chr10 99384498 99384791 -40931974 + AluSg SINE Alu 9 309 -1 2874 124 9 25 chr10 99385353 99385788 -40930977 - MSTA LTR MaLR 0 428 1 1907 137 7 0 chr10 99385814 99386114 -40930651 - AluSx SINE Alu -10 302 1 1778 132 45 3 chr10 99386529 99386818 -40929947 + AluSq SINE Alu 1 301 -12 896 238 28 60 chr10 99387464 99387519 -40929246 - MIR SINE MIR 0 262 207 1907 146 0 13 chr10 99387519 99387835 -40928930 - AluJb SINE Alu 0 312 1 896 238 28 60 chr10 99387835 99388031 -40928734 - MIR SINE MIR -55 207 19 199 282 113 0 chr10 99388086 99388157 -40928608 + MIR SINE MIR 74 152 -110 704 235 65 20 chr10 99388195 99388395 -40928370 + MER3 DNA MER1_type 1 209 0 451 298 8 0 chr10 99388397 99388518 -40928247 + L2 LINE L2 3191 3312 -1 341 367 111 0 chr10 99388522 99388729 -40928036 - L3 LINE CR1 -27 1550 1321 233 305 0 0 chr10 99389107 99389166 -40927599 - L2 LINE L2 -17 3255 3197 210 167 0 0 chr10 99389371 99389407 -40927358 + L2 LINE L2 3214 3249 -23 394 214 38 76 chr10 99389431 99389562 -40927203 - MIR SINE MIR -55 153 28 217 317 12 12 chr10 99389717 99389799 -40926966 - L2 LINE L2 -1 3312 3231 3194 253 107 82 chr10 99389799 99391198 -40925567 + HAL1 LINE L1 2 1365 -1142 2231 93 0 3 chr10 99391198 99391499 -40925266 + AluSx SINE Alu 1 300 -12 3194 253 107 82 chr10 99391499 99392015 -40924750 + HAL1 LINE L1 1365 1983 -524 1678 155 14 7 chr10 99392015 99392312 -40924453 + AluJo SINE Alu 4 302 0 3194 253 107 82 chr10 99392312 99392633 -40924132 + HAL1 LINE L1 1983 2295 -212 674 156 0 91 chr10 99392643 99392797 -40923968 + FLAM_C SINE Alu 1 140 -3 229 298 29 0 chr10 99392800 99392904 -40923861 + HAL1 LINE L1 2281 2387 -120 893 158 0 7 chr10 99392953 99393099 -40923666 - AluSq/x SINE Alu -166 147 3 1937 115 0 10 chr10 99393130 99393425 -40923340 - AluSx SINE Alu -10 302 11 1540 89 68 0 chr10 99393710 99393947 -40922818 - AluSq SINE Alu -60 253 1 619 274 24 38 chr10 99394044 99394245 -40922520 - MIR SINE MIR -32 230 37 661 294 145 11 chr10 99394384 99394666 -40922099 + L3 LINE CR1 1147 1466 -111 348 43 0 0 chr10 99394671 99394717 -40922048 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 228 346 108 8 chr10 99394719 99394849 -40921916 - L2 LINE L2 -13 3259 3117 772 255 53 89 chr10 99394925 99395399 -40921366 + LTR16A1 LTR ERVL 1 457 0 347 295 207 8 chr10 99395400 99395637 -40921128 - L2 LINE L2 -583 2731 2448 234 305 24 12 chr10 99395632 99395714 -40921051 + L3 LINE CR1 1464 1546 -31 * 440 293 198 5 chr10 99396104 99396316 -40920449 - MIR SINE MIR -8 254 2 2606 127 52 8 chr10 99397203 99397657 -40919108 + L1MC2 LINE L1 5873 6344 0 1816 162 3 10 chr10 99397784 99398093 -40918672 + AluJb SINE Alu 1 307 -5 2428 63 0 3 chr10 99398187 99398487 -40918278 - AluY SINE Alu -6 305 7 1446 174 73 0 chr10 99398545 99398820 -40917945 - AluJb SINE Alu -16 296 2 236 320 29 0 chr10 99398886 99398989 -40917776 - L1ME LINE L1 -288 5882 5777 523 259 196 39 chr10 99399055 99399211 -40917554 + L1ME4a LINE L1 5816 5946 -175 2071 118 0 7 chr10 99399211 99399507 -40917258 - AluSq SINE Alu -19 294 1 1478 184 3 26 chr10 99399509 99399813 -40916952 - AluJo SINE Alu -5 307 11 523 259 196 39 chr10 99399813 99399908 -40916857 + L1ME4a LINE L1 5946 6110 -11 270 366 54 32 chr10 99400948 99401227 -40915538 + L2 LINE L2 2553 2837 -477 275 324 56 102 chr10 99401677 99402069 -40914696 + MLT1K LTR MaLR 149 522 -66 322 279 129 25 chr10 99402170 99402410 -40914355 - L1ME4a LINE L1 -4 6117 5853 234 105 0 0 chr10 99402507 99402545 -40914220 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 1989 141 0 3 chr10 99403440 99403744 -40913021 - AluSx SINE Alu -9 303 1 1333 216 7 17 chr10 99403757 99404048 -40912717 - AluJo SINE Alu -24 288 1 200 246 35 18 chr10 99404650 99404707 -40912058 + L2 LINE L2 3215 3272 0 262 222 0 63 chr10 99404722 99404785 -40911980 + L2 LINE L2 2995 3053 -219 5157 148 10 39 chr10 99404845 99405009 -40911756 + L1MB7 LINE L1 5277 5444 -740 1067 181 0 11 chr10 99405009 99405186 -40911579 + FAM SINE Alu 1 175 0 5157 148 10 39 chr10 99405186 99405936 -40910829 + L1MB7 LINE L1 5444 6164 -20 222 253 27 27 chr10 99407269 99407344 -40909421 + CT-rich Low_complexity Low_complexity 4 78 0 512 156 15 30 chr10 99407687 99407822 -40908943 + C-rich Low_complexity Low_complexity 3 135 0 297 75 0 0 chr10 99407873 99407913 -40908852 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 1552 159 9 81 chr10 99407913 99408084 -40908681 - AluJo SINE Alu -15 297 158 1928 138 0 17 chr10 99408084 99408382 -40908383 - AluSx SINE Alu -19 293 1 1552 159 9 81 chr10 99408382 99408530 -40908235 - AluJo SINE Alu -154 158 1 865 196 6 18 chr10 99408691 99408854 -40907911 - FRAM SINE Alu -1 165 5 314 240 101 23 chr10 99409471 99409600 -40907165 - MIR SINE MIR 0 262 124 208 279 14 100 chr10 99410025 99410165 -40906600 - L2 LINE L2 -83 3230 3103 724 192 23 0 chr10 99410311 99410441 -40906324 - MER45A DNA AcHobo 0 178 46 1862 139 3 19 chr10 99410674 99410984 -40905781 + AluJb SINE Alu 1 305 -7 245 143 82 0 chr10 99411012 99411061 -40905704 - L2 LINE L2 -225 3047 2995 2363 63 3 3 chr10 99411061 99411364 -40905401 - AluSg SINE Alu -7 303 1 238 212 83 114 chr10 99411743 99411782 -40904983 - L1ME LINE L1 -222 5899 5860 1867 112 48 20 chr10 99411782 99412077 -40904688 - AluSx SINE Alu -9 303 1 238 212 83 114 chr10 99412077 99412230 -40904535 - L1ME LINE L1 -261 5860 5713 361 214 56 112 chr10 99412251 99412429 -40904336 + MIR SINE MIR 92 259 -3 268 236 47 57 chr10 99412900 99413006 -40903759 + MIR3 SINE MIR 58 162 -46 436 244 89 15 chr10 99413127 99413262 -40903503 + L2 LINE L2 3168 3312 -1 518 227 41 132 chr10 99413266 99413486 -40903279 + MIR SINE MIR 40 239 -23 516 226 90 7 chr10 99413490 99413645 -40903120 - MIR SINE MIR -1 261 94 27 49 0 0 chr10 99413868 99413909 -40902856 + GC_rich Low_complexity Low_complexity 1 41 0 31 92 0 0 chr10 99414093 99414180 -40902585 + GC_rich Low_complexity Low_complexity 1 87 0 22 35 0 0 chr10 99415313 99415342 -40901423 + GC_rich Low_complexity Low_complexity 1 29 0 252 295 90 24 chr10 99416378 99416544 -40900221 + MIR3 SINE MIR 17 193 -15 305 385 0 7 chr10 99416903 99417051 -40899714 - MIR3 SINE MIR -14 194 48 1886 131 3 35 chr10 99417089 99417402 -40899363 - AluJo SINE Alu -9 303 1 2235 96 0 3 chr10 99418559 99418872 -40897893 + AluSx SINE Alu 1 312 0 1062 130 6 6 chr10 99418872 99419041 -40897724 + AluSg/x SINE Alu 132 300 -10 2217 82 23 3 chr10 99420234 99420537 -40896228 + AluSq SINE Alu 1 309 -4 23 33 0 0 chr10 99420654 99420684 -40896081 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr10 99420691 99420717 -40896048 + (TG)n Simple_repeat Simple_repeat 2 27 0 353 138 0 0 chr10 99420727 99420785 -40895980 - Alu SINE Alu -1 299 242 394 283 115 42 chr10 99421530 99421721 -40895044 + MIR SINE MIR 42 246 -16 1958 120 3 13 chr10 99422437 99422736 -40894029 + AluJb SINE Alu 3 298 -14 1097 97 13 0 chr10 99422811 99422965 -40893800 + AluSg/x SINE Alu 137 292 -20 201 222 22 44 chr10 99423216 99423261 -40893504 + L2 LINE L2 3257 3300 -13 2116 87 3 24 chr10 99423747 99424045 -40892720 - AluSx SINE Alu -20 292 1 2211 92 20 0 chr10 99424052 99424356 -40892409 - AluSp SINE Alu -3 310 1 338 284 52 43 chr10 99425859 99425975 -40890790 - MIR3 SINE MIR -38 170 54 631 216 66 84 chr10 99426075 99426302 -40890463 + MIR SINE MIR 6 228 -34 434 283 39 117 chr10 99426711 99427019 -40889746 - L2 LINE L2 -4 3268 2985 329 248 113 43 chr10 99427236 99427377 -40889388 - MIR SINE MIR -62 200 50 363 208 73 21 chr10 99427815 99427911 -40888854 + MIR SINE MIR 95 195 -67 1079 156 39 0 chr10 99428063 99428243 -40888522 - MER5A DNA MER1_type 0 189 3 233 307 0 27 chr10 99429146 99429221 -40887544 - MER5A DNA MER1_type -32 157 85 424 309 195 48 chr10 99431606 99431953 -40884812 + L3 LINE CR1 268 563 -1014 1939 138 7 3 chr10 99431953 99432258 -40884507 - AluSx SINE Alu -6 306 1 424 309 195 48 chr10 99432258 99432489 -40884276 + L3 LINE CR1 563 931 -646 1401 192 3 42 chr10 99432879 99433191 -40883574 + AluJb SINE Alu 1 300 -12 569 164 154 0 chr10 99433594 99433698 -40883067 - FLAM_A SINE Alu -12 121 2 1597 116 0 0 chr10 99433840 99434064 -40882701 + AluSg/x SINE Alu 69 292 -18 233 183 107 107 chr10 99434147 99434316 -40882449 + L1ME4a LINE L1 5949 6117 -4 638 255 150 20 chr10 99434488 99434735 -40882030 - HAL1 LINE L1 -4 2503 2225 219 69 0 0 chr10 99434744 99434773 -40881992 + (T)n Simple_repeat Simple_repeat 1 29 0 390 331 46 0 chr10 99435691 99435821 -40880944 - L3 LINE CR1 -113 1464 1329 787 133 0 6 chr10 99436156 99436411 -40880354 + AluJo SINE Alu 1 304 -8 2095 113 13 0 chr10 99436463 99436764 -40880001 - AluSx SINE Alu -7 305 1 2253 90 0 0 chr10 99437233 99437533 -40879232 + AluSx SINE Alu 1 300 -12 228 67 0 0 chr10 99438110 99438140 -40878625 + (TG)n Simple_repeat Simple_repeat 1 30 0 243 177 13 51 chr10 99438376 99438455 -40878310 + L1ME4a LINE L1 6044 6119 -2 26 0 0 0 chr10 99439256 99439282 -40877483 + AT_rich Low_complexity Low_complexity 1 26 0 302 266 0 13 chr10 99439571 99439650 -40877115 - Charlie4 DNA MER1_type 0 1961 1884 601 256 117 11 chr10 99439656 99439836 -40876929 - MIR SINE MIR -1 261 63 219 318 127 16 chr10 99440147 99440273 -40876492 + MIR SINE MIR 35 174 -88 475 252 34 34 chr10 99440573 99440720 -40876045 - MIR3 SINE MIR -1 207 61 306 87 0 0 chr10 99441373 99441419 -40875346 + (TG)n Simple_repeat Simple_repeat 2 47 0 1074 173 0 0 chr10 99442647 99442820 -40873945 - FAM SINE Alu -2 173 1 335 305 158 6 chr10 99443148 99443312 -40873453 + MER5A DNA MER1_type 1 189 0 222 296 80 11 chr10 99443524 99443612 -40873153 - MIR SINE MIR -111 151 58 1472 170 31 7 chr10 99443684 99443978 -40872787 - MER33 DNA MER1_type -4 320 20 619 286 173 8 chr10 99444669 99445022 -40871743 - Charlie8 DNA MER1_type -1945 472 62 2074 120 10 0 chr10 99445022 99445330 -40871435 + AluSx SINE Alu 1 311 -1 938 246 86 0 chr10 99445331 99445563 -40871202 - L1MD2 LINE L1 -32 6327 6076 922 133 0 0 chr10 99445573 99445701 -40871064 + FLAM_C SINE Alu 1 128 -5 227 325 70 9 chr10 99445713 99445827 -40870938 - Charlie8 DNA MER1_type -2296 121 1 1281 164 55 25 chr10 99445851 99446126 -40870639 - L1MB7 LINE L1 -15 6169 5887 365 336 15 8 chr10 99446132 99446263 -40870502 - MIR SINE MIR -60 148 17 294 257 200 0 chr10 99446452 99446557 -40870208 - L2 LINE L2 -9 3304 3179 483 335 163 43 chr10 99447207 99447532 -40869233 - L2 LINE L2 -3 3269 2906 2310 87 0 0 chr10 99448172 99448470 -40868295 + AluSg SINE Alu 5 302 -8 2204 90 0 0 chr10 99449208 99449543 -40867222 + AluY SINE Alu 3 311 0 234 0 0 0 chr10 99450284 99450310 -40866455 + (T)n Simple_repeat Simple_repeat 1 26 0 238 284 95 54 chr10 99450494 99450642 -40866123 - MER5B DNA MER1_type -20 158 5 2157 111 3 0 chr10 99451071 99451377 -40865388 - AluSg SINE Alu 0 310 4 326 50 0 0 chr10 99451836 99451876 -40864889 + tRNA-Cys-TGC tRNA tRNA 1 40 -35 434 212 12 0 chr10 99451947 99452032 -40864733 + L2 LINE L2 3228 3313 0 203 243 206 19 chr10 99452415 99452522 -40864243 + MIR3 SINE MIR 30 156 -52 562 208 103 108 chr10 99452574 99453021 -40863744 - Charlie8 DNA MER1_type -2141 276 3 208 200 44 22 chr10 99453027 99453072 -40863693 + L3 LINE CR1 1530 1575 -2 207 350 97 44 chr10 99453454 99453635 -40863130 + MIR SINE MIR 16 205 -57 408 275 69 15 chr10 99454740 99454871 -40861894 - L2 LINE L2 0 3313 3176 * 518 209 0 52 chr10 99454866 99454981 -40861784 + L2 LINE L2 3189 3297 -16 560 239 121 62 chr10 99454988 99455403 -40861362 - L2 LINE L2 -116 3197 2753 208 286 117 0 chr10 99455507 99455584 -40861181 - MIR SINE MIR -123 139 54 189 121 0 0 chr10 99455711 99455744 -40861021 + (TG)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr10 99455764 99455790 -40860975 + AT_rich Low_complexity Low_complexity 1 26 0 527 309 82 18 chr10 99457563 99457683 -40859082 - L1ME4a LINE L1 -67 6054 5943 2221 98 3 0 chr10 99457683 99457978 -40858787 + AluSx SINE Alu 1 296 -16 527 309 82 18 chr10 99457978 99458245 -40858520 - L1ME4a LINE L1 -178 5943 5642 22 0 0 0 chr10 99458419 99458441 -40858324 + AT_rich Low_complexity Low_complexity 1 22 0 1967 125 14 3 chr10 99458951 99459240 -40857525 + AluSx SINE Alu 1 292 -20 288 310 85 50 chr10 99459410 99459610 -40857155 - L2 LINE L2 -338 2976 2770 221 333 65 8 chr10 99459806 99459929 -40856836 + L2 LINE L2 3133 3262 -10 380 343 44 25 chr10 99460343 99460547 -40856218 - L2 LINE L2 -1289 2025 1818 1641 172 10 10 chr10 99460998 99461295 -40855470 - AluJb SINE Alu -13 299 3 1928 123 37 0 chr10 99461315 99461615 -40855150 - AluSx SINE Alu -1 311 1 446 264 8 24 chr10 99462891 99463016 -40853749 - LTR67 LTR ERVL -7 550 428 419 308 91 34 chr10 99463778 99463986 -40852779 + L1ME4a LINE L1 5727 5946 -175 1762 145 16 16 chr10 99464088 99464399 -40852366 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr10 99464432 99464453 -40852312 + AT_rich Low_complexity Low_complexity 1 21 0 423 268 143 36 chr10 99464907 99465003 -40851762 - MER5A DNA MER1_type 0 189 105 2063 114 3 13 chr10 99465003 99465310 -40851455 - AluSx SINE Alu -8 304 1 423 268 143 36 chr10 99465310 99465381 -40851384 - MER5A DNA MER1_type -84 105 4 1769 199 42 25 chr10 99465460 99465750 -40851015 + L1ME1 LINE L1 4435 4736 -1410 2158 152 96 10 chr10 99465750 99466144 -40850621 - MSTA LTR MaLR 0 428 1 1769 199 42 25 chr10 99466144 99466285 -40850480 + L1ME1 LINE L1 4736 4873 -1273 1385 214 30 3 chr10 99466271 99466575 -40850190 + L1ME1 LINE L1 5853 6164 -2 * 715 315 70 0 chr10 99466685 99466926 -40849839 + MIR SINE MIR 4 261 -1 291 309 130 6 chr10 99467045 99467207 -40849558 - MIR3 SINE MIR -13 195 14 209 196 0 54 chr10 99467536 99467592 -40849173 - MIR SINE MIR -13 249 197 308 226 0 12 chr10 99467604 99467688 -40849077 - L1MA10 LINE L1 -13 6321 6239 388 315 89 47 chr10 99468216 99468398 -40848367 + MIR SINE MIR 3 197 -65 1711 110 0 27 chr10 99468398 99468661 -40848104 - AluSx SINE Alu -12 300 45 388 315 89 47 chr10 99468661 99468691 -40848074 + MIR SINE MIR 197 224 -38 305 317 89 25 chr10 99469229 99469431 -40847334 + L1ME4a LINE L1 5711 5925 -196 416 328 26 21 chr10 99469439 99469628 -40847137 - MIR SINE MIR -34 228 39 341 303 98 60 chr10 99470248 99470482 -40846283 + MIR SINE MIR 20 262 0 230 293 34 82 chr10 99470606 99470814 -40845951 - L2 LINE L2 -165 3107 2910 423 285 26 6 chr10 99471616 99471744 -40845021 + MIR SINE MIR 26 151 -57 220 330 98 9 chr10 99472414 99472526 -40844239 + MIR SINE MIR 22 143 -65 200 176 0 0 chr10 99475443 99475477 -40841288 + C-rich Low_complexity Low_complexity 1 34 0 198 0 0 0 chr10 99476149 99476171 -40840594 + (TG)n Simple_repeat Simple_repeat 2 23 0 493 319 97 29 chr10 99476687 99476925 -40839840 + MIR SINE MIR 9 262 0 598 210 86 70 chr10 99477061 99477247 -40839518 - MER5A DNA MER1_type 0 189 1 1740 168 26 0 chr10 99478004 99478307 -40838458 - AluJb SINE Alu -1 311 1 205 343 29 0 chr10 99478547 99478617 -40838148 - L2 LINE L2 -12 3260 3189 203 296 37 0 chr10 99478758 99478812 -40837953 + MIR3 SINE MIR 141 196 -12 2144 108 3 0 chr10 99479023 99479320 -40837445 + AluSx SINE Alu 1 298 -14 446 227 122 87 chr10 99479921 99480042 -40836723 + MIR SINE MIR 64 194 -68 2164 121 0 10 chr10 99480042 99480355 -40836410 - AluSg SINE Alu 0 310 1 446 227 122 87 chr10 99480355 99480405 -40836360 + MIR SINE MIR 194 241 -21 216 339 152 37 chr10 99480495 99480876 -40835889 - L2 LINE L2 -731 2583 2159 1653 256 76 49 chr10 99481606 99482157 -40834608 - MER77 LTR ERV1 -6 599 53 207 245 0 19 chr10 99482344 99482397 -40834368 + A-rich Low_complexity Low_complexity 1 52 0 284 256 238 24 chr10 99482968 99483132 -40833633 - MIR SINE MIR -34 228 30 215 336 89 13 chr10 99483644 99483759 -40833006 - MIR SINE MIR -66 142 46 1410 190 106 0 chr10 99483781 99484092 -40832673 + MER2 DNA MER2_type 1 344 0 799 221 0 0 chr10 99484278 99484427 -40832338 + MER5A DNA MER1_type 1 149 -40 587 189 173 40 chr10 99484566 99484797 -40831968 + MIR SINE MIR 2 251 -11 2056 168 6 3 chr10 99484964 99485303 -40831462 + MER58B DNA MER1_type 2 341 0 635 232 133 26 chr10 99485354 99485587 -40831178 - MIR SINE MIR -3 259 2 23 33 0 0 chr10 99486744 99486774 -40829991 + AT_rich Low_complexity Low_complexity 1 30 0 1600 162 41 14 chr10 99487951 99488241 -40828524 - AluJo SINE Alu -14 298 1 2069 118 0 25 chr10 99488331 99488645 -40828120 + AluSq SINE Alu 1 306 -7 2157 122 0 0 chr10 99488647 99488959 -40827806 + AluSx SINE Alu 1 312 0 2032 97 11 4 chr10 99489123 99489402 -40827363 + AluSg SINE Alu 17 297 -13 1482 111 5 0 chr10 99489423 99489630 -40827135 + AluY SINE Alu 1 208 -103 295 119 0 0 chr10 99489730 99489806 -40826959 + Alu SINE Alu 239 314 0 306 0 0 0 chr10 99493092 99493126 -40823639 + (T)n Simple_repeat Simple_repeat 1 34 0 190 397 0 0 chr10 99493621 99493694 -40823071 - L2 LINE L2 -6 3307 3235 465 304 22 50 chr10 99493738 99493919 -40822846 - MER5A DNA MER1_type -6 183 8 242 163 23 0 chr10 99495318 99495361 -40821404 - L2 LINE L2 -17 3255 3212 21 0 0 0 chr10 99497768 99497789 -40818976 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr10 99498450 99498472 -40818293 + (T)n Simple_repeat Simple_repeat 1 22 0 337 274 28 28 chr10 99498774 99498880 -40817885 - MER5A DNA MER1_type -80 109 4 1932 142 0 22 chr10 99499056 99499372 -40817393 - AluJb SINE Alu -3 309 1 1313 124 0 5 chr10 99499384 99499601 -40817164 - AluSg/x SINE Alu 0 308 93 350 263 26 64 chr10 99499672 99499828 -40816937 - MIR3 SINE MIR -33 175 26 229 282 165 0 chr10 99500195 99500280 -40816485 + MIR SINE MIR 30 128 -80 491 224 32 16 chr10 99500354 99500479 -40816286 + MIR SINE MIR 117 243 -19 351 330 83 43 chr10 99500982 99501258 -40815507 - L2 LINE L2 -4 3309 3023 536 213 15 134 chr10 99501426 99501557 -40815208 - MER5A DNA MER1_type -3 186 86 1793 150 6 25 chr10 99501557 99501871 -40814894 - AluJo SINE Alu -4 308 1 536 213 15 134 chr10 99501871 99501941 -40814824 - MER5A DNA MER1_type -103 86 9 353 261 194 0 chr10 99502108 99502242 -40814523 + MIR SINE MIR 33 192 -70 200 274 55 14 chr10 99502336 99502409 -40814356 - L2 LINE L2 -5 3308 3233 322 308 37 19 chr10 99502965 99503072 -40813693 + MIR SINE MIR 39 147 -61 2243 94 0 0 chr10 99503169 99503467 -40813298 + AluSc SINE Alu 1 298 -11 849 130 0 36 chr10 99504125 99504263 -40812502 + AluJb SINE Alu 9 141 -171 1623 153 0 71 chr10 99504263 99504589 -40812176 + AluJb SINE Alu 1 303 -9 1592 176 48 0 chr10 99505636 99505925 -40810840 - AluJo SINE Alu -9 303 1 574 307 33 29 chr10 99506650 99506894 -40809871 + MIR SINE MIR 2 246 -16 310 392 32 0 chr10 99506986 99507111 -40809654 + L2 LINE L2 3101 3229 -43 341 311 8 45 chr10 99507258 99507390 -40809375 - MIR SINE MIR -46 216 90 912 179 0 0 chr10 99507537 99507682 -40809083 - MER58B DNA MER1_type -15 326 182 362 235 10 20 chr10 99508215 99508313 -40808452 + MER103 DNA DNA 2 98 -68 468 299 107 17 chr10 99508889 99509066 -40807699 - MIR SINE MIR -62 200 8 347 261 11 11 chr10 99509088 99509180 -40807585 + MIR SINE MIR 73 164 -98 21 0 0 0 chr10 99509467 99509488 -40807277 + AT_rich Low_complexity Low_complexity 1 21 0 222 293 33 93 chr10 99510176 99510228 -40806537 + MIR3 SINE MIR 3 57 -151 2299 74 7 0 chr10 99510228 99510524 -40806241 + AluSp SINE Alu 1 298 -15 222 293 33 93 chr10 99510524 99510621 -40806144 + MIR3 SINE MIR 57 143 -65 337 279 144 0 chr10 99513245 99513356 -40803409 - L2 LINE L2 -1 3312 3186 216 346 153 16 chr10 99514353 99514607 -40802158 + L3b LINE CR1 1193 1481 -102 22 0 0 0 chr10 99514744 99514766 -40801999 + AT_rich Low_complexity Low_complexity 1 22 0 741 265 71 25 chr10 99515676 99515914 -40800851 - MIR SINE MIR -12 250 2 2199 90 0 26 chr10 99516087 99516397 -40800368 + AluSx SINE Alu 7 308 -4 202 191 143 0 chr10 99516409 99516451 -40800314 + MER5B DNA MER1_type 131 178 0 859 152 0 28 chr10 99517477 99517622 -40799143 + FRAM SINE Alu 22 162 -14 2103 113 7 0 chr10 99518750 99519051 -40797714 + AluSx SINE Alu 1 303 -9 276 311 106 13 chr10 99519386 99519537 -40797228 + MIR SINE MIR 28 146 -62 1802 153 3 32 chr10 99519885 99520198 -40796567 - AluJo SINE Alu -8 304 1 1994 153 0 6 chr10 99520360 99520674 -40796091 - AluSx SINE Alu 0 312 1 447 224 20 107 chr10 99523144 99523340 -40793425 + MIR SINE MIR 84 262 0 1498 135 4 20 chr10 99523579 99523831 -40792934 - AluSg/x SINE Alu 0 312 65 1465 161 23 0 chr10 99524308 99524569 -40792196 + L1 LINE L1 4752 5018 -1128 698 223 134 42 chr10 99524631 99524869 -40791896 - MIR SINE MIR -2 260 1 917 258 208 26 chr10 99526358 99527027 -40789738 + L2 LINE L2 2504 3312 -1 329 220 94 28 chr10 99527327 99527526 -40789239 - L1MC/D LINE L1 -485 5636 5507 1937 91 0 0 chr10 99527762 99528015 -40788750 + AluSx SINE Alu 1 253 -59 302 299 120 40 chr10 99528087 99528361 -40788404 - MLT1K LTR MaLR -106 482 187 435 133 0 0 chr10 99528395 99528455 -40788310 + AluS SINE Alu 2 61 -257 349 284 23 0 chr10 99529268 99529356 -40787409 + Charlie1 DNA MER1_type 8 97 -2664 822 220 5 72 chr10 99529361 99529536 -40787229 + MLT1F LTR MaLR 1 159 -383 2206 112 3 0 chr10 99529536 99529840 -40786925 + AluSx SINE Alu 1 305 -7 822 220 5 72 chr10 99529840 99529887 -40786878 + MLT1F LTR MaLR 159 208 -334 227 306 72 27 chr10 99529971 99530082 -40786683 + MIR SINE MIR 20 135 -73 382 258 138 18 chr10 99530189 99530356 -40786409 - MIR SINE MIR -29 233 47 605 206 14 93 chr10 99530930 99531144 -40785621 - MLT1L LTR MaLR -225 390 194 2010 119 7 0 chr10 99531513 99531806 -40784959 + AluSx SINE Alu 1 295 -17 611 276 56 33 chr10 99531878 99532182 -40784583 - L1ME4a LINE L1 -227 5894 5584 3160 260 131 12 chr10 99532799 99534106 -40782659 + L2 LINE L2 1706 3173 -140 198 103 0 0 chr10 99534109 99534138 -40782627 + (CA)n Simple_repeat Simple_repeat 2 30 0 757 142 85 43 chr10 99534195 99534336 -40782429 + AluJb SINE Alu 136 282 -30 190 56 56 0 chr10 99534358 99534394 -40782371 + (TA)n Simple_repeat Simple_repeat 1 38 0 2202 102 0 0 chr10 99534397 99534692 -40782073 + AluSx SINE Alu 1 295 -17 292 123 27 0 chr10 99534692 99534765 -40782000 + (TA)n Simple_repeat Simple_repeat 2 76 0 1713 167 13 10 chr10 99535116 99535415 -40781350 + AluJb SINE Alu 2 301 -11 1921 117 57 0 chr10 99535490 99535771 -40780994 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr10 99537239 99537284 -40779481 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 276 44 11 chr10 99537375 99537556 -40779209 - MIR SINE MIR -13 249 63 1783 142 14 10 chr10 99537706 99538001 -40778764 + AluJb SINE Alu 1 296 -16 245 196 0 20 chr10 99538365 99538416 -40778349 + L2 LINE L2 3223 3272 0 24 0 0 0 chr10 99538780 99538804 -40777961 + AT_rich Low_complexity Low_complexity 1 24 0 425 276 151 71 chr10 99539151 99539376 -40777389 - L2 LINE L2 -2 3270 3028 526 220 34 17 chr10 99539555 99539673 -40777092 + L2 LINE L2 3194 3313 0 350 255 144 45 chr10 99539811 99540054 -40776711 - L2 LINE L2 -813 2501 2235 263 283 39 4 chr10 99540575 99540692 -40776073 + MIR SINE MIR 81 206 -56 1869 97 0 40 chr10 99540703 99540981 -40775784 + AluSg SINE Alu 1 267 -43 2145 116 0 0 chr10 99541344 99541637 -40775128 + AluSx SINE Alu 1 293 -19 862 185 144 118 chr10 99541707 99542097 -40774668 - MER57A LTR ERV1 0 403 4 804 156 7 15 chr10 99542926 99543061 -40773704 + AluJo SINE Alu 5 138 -174 415 192 216 30 chr10 99543113 99543280 -40773485 + MIR SINE MIR 46 243 -19 381 188 0 0 chr10 99543709 99543789 -40772976 + (TG)n Simple_repeat Simple_repeat 1 80 0 354 45 0 0 chr10 99545059 99545103 -40771662 + (TC)n Simple_repeat Simple_repeat 1 44 0 2082 120 0 17 chr10 99548652 99548952 -40767813 + AluSx SINE Alu 1 295 -17 328 272 59 41 chr10 99549684 99549853 -40766912 - MIR3 SINE MIR -18 190 19 21 0 0 0 chr10 99550315 99550336 -40766429 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 99552244 99552272 -40764493 + AT_rich Low_complexity Low_complexity 1 28 0 1806 153 0 48 chr10 99552315 99552629 -40764136 + AluJo SINE Alu 1 299 -13 1465 196 17 38 chr10 99552686 99552977 -40763788 + AluJo SINE Alu 1 285 -27 881 220 50 11 chr10 99553364 99553546 -40763219 - MER5A DNA MER1_type 0 189 1 1849 166 31 0 chr10 99554427 99554716 -40762049 + AluJb SINE Alu 1 298 -14 2248 111 0 3 chr10 99554722 99555020 -40761745 + AluSx SINE Alu 1 297 -15 509 286 179 0 chr10 99556184 99556352 -40760413 - MIR SINE MIR -21 241 44 260 244 24 81 chr10 99556601 99556724 -40760041 - MER103 DNA DNA 0 166 51 472 307 97 9 chr10 99557081 99557309 -40759456 + MIR SINE MIR 4 251 -11 2189 116 0 3 chr10 99557753 99558046 -40758719 + AluSx SINE Alu 1 292 -20 438 250 0 0 chr10 99558057 99558153 -40758612 + MER103 DNA DNA 25 120 -46 21 82 0 0 chr10 99558806 99558855 -40757910 + AT_rich Low_complexity Low_complexity 1 49 0 2481 80 3 0 chr10 99558872 99559184 -40757581 + AluSp SINE Alu 1 313 0 2062 86 45 28 chr10 99559284 99559594 -40757171 + AluSg SINE Alu 1 315 0 1934 139 7 17 chr10 99559722 99560017 -40756748 + AluJb SINE Alu 1 292 -20 375 281 119 33 chr10 99560024 99560234 -40756531 - MIR SINE MIR -6 256 29 229 349 0 12 chr10 99560976 99561062 -40755703 + CT-rich Low_complexity Low_complexity 3 87 0 2229 100 42 0 chr10 99561317 99561606 -40755159 + AluSq SINE Alu 1 301 -12 747 158 0 0 chr10 99561616 99561736 -40755029 + FLAM_C SINE Alu 21 140 -3 232 310 70 0 chr10 99562355 99562455 -40754310 + L1ME4a LINE L1 5703 5809 -361 228 281 81 52 chr10 99562468 99562778 -40753987 + L1ME4a LINE L1 5803 6121 0 2462 71 3 0 chr10 99563450 99563744 -40753021 + AluSx SINE Alu 1 295 -17 212 275 0 50 chr10 99565080 99565160 -40751605 + T-rich Low_complexity Low_complexity 3 78 0 507 195 57 0 chr10 99566733 99566856 -40749909 + MIR SINE MIR 48 177 -85 3537 105 30 42 chr10 99568596 99568667 -40748098 - LTR49 LTR ERV1 0 595 525 1955 109 51 7 chr10 99568667 99568961 -40747804 - AluSx SINE Alu -5 307 1 3537 105 30 42 chr10 99568961 99569491 -40747274 - LTR49 LTR ERV1 -70 525 1 209 224 0 20 chr10 99569650 99569699 -40747066 + L2 LINE L2 3224 3271 -1 1915 125 16 72 chr10 99569705 99570025 -40746740 + AluSx SINE Alu 1 302 -10 3180 139 35 0 chr10 99570206 99570695 -40746070 - MER84 LTR ERV1 0 507 2 514 42 42 14 chr10 99570695 99570767 -40745998 - MER84 LTR ERVI -433 74 1 204 318 73 18 chr10 99570767 99570877 -40745888 - L2 LINE L2 -237 3035 2920 435 343 52 6 chr10 99571208 99571380 -40745385 + MIR3 SINE MIR 20 199 -9 2308 107 0 13 chr10 99571651 99571960 -40744805 + AluSx SINE Alu 5 309 -3 506 100 0 0 chr10 99571977 99572047 -40744718 + HY1 scRNA scRNA 5 74 -38 1531 199 19 0 chr10 99572951 99573213 -40743552 + AluJb SINE Alu 1 267 -45 281 252 47 28 chr10 99573490 99573597 -40743168 + MIR SINE MIR 117 225 -37 267 307 105 46 chr10 99574475 99574628 -40742137 - MIR3 SINE MIR -9 199 38 219 69 0 0 chr10 99575174 99575203 -40741562 + (TG)n Simple_repeat Simple_repeat 1 29 0 1154 158 190 7 chr10 99575407 99575686 -40741079 - MER33 DNA MER1_type -2 322 1 198 227 241 21 chr10 99575696 99575837 -40740928 + L3b LINE CR1 1143 1314 -269 2164 103 47 10 chr10 99576603 99576903 -40739862 + AluSx SINE Alu 1 311 -1 224 325 100 0 chr10 99577367 99577447 -40739318 + MER5A DNA MER1_type 18 105 -84 352 269 88 31 chr10 99577508 99577668 -40739097 - L3 LINE CR1 -80 1497 1329 232 298 27 8 chr10 99578054 99578175 -40738590 + MIR SINE MIR 5 130 -78 224 267 114 29 chr10 99578338 99578443 -40738322 + MIR3 SINE MIR 68 181 -27 1732 152 60 3 chr10 99578469 99578752 -40738013 - AluJo SINE Alu -13 299 1 355 345 101 12 chr10 99580914 99581340 -40735425 - L2 LINE L2 -236 3036 2579 183 244 53 76 chr10 99581492 99581623 -40735142 - L2 LINE L2 -1330 1984 1857 2301 101 7 0 chr10 99581780 99582077 -40734688 + AluSc SINE Alu 1 299 -10 183 244 0 0 chr10 99582924 99582969 -40733796 + L2 LINE L2 3269 3313 0 1587 110 46 13 chr10 99583471 99583708 -40733057 + MER1B DNA MER1_type 135 339 0 2242 103 0 0 chr10 99584387 99584717 -40732048 - AluSx SINE Alu 0 330 1 571 269 84 44 chr10 99584946 99585173 -40731592 - MIR SINE MIR -7 255 20 1525 179 42 6 chr10 99585510 99585823 -40730942 - MER33 DNA MER1_type 0 324 1 2085 145 0 0 chr10 99585991 99586287 -40730478 - AluSx SINE Alu -16 296 1 203 271 0 0 chr10 99586374 99586422 -40730343 + MIR SINE MIR 73 120 -88 351 320 23 8 chr10 99586519 99586647 -40730118 + MER117 DNA MER1_type 15 144 -53 417 246 60 15 chr10 99586996 99587130 -40729635 + MIR3 SINE MIR 20 159 -49 2182 121 10 0 chr10 99591807 99592112 -40724653 - AluJb SINE Alu -4 308 1 921 138 7 0 chr10 99592112 99592250 -40724515 - AluJb SINE Alu -172 140 2 288 77 0 0 chr10 99592436 99592475 -40724290 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr10 99596452 99596484 -40720281 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr10 99599570 99599594 -40717171 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2203 104 37 0 chr10 99600940 99601239 -40715526 + AluSx SINE Alu 1 310 -2 185 221 15 0 chr10 99602815 99602883 -40713882 + CT-rich Low_complexity Low_complexity 4 72 0 296 197 30 0 chr10 99604503 99604569 -40712196 - AluS SINE Alu -235 68 1 222 231 0 51 chr10 99604706 99604784 -40711981 + CT-rich Low_complexity Low_complexity 2 75 0 2595 57 0 0 chr10 99604913 99605212 -40711553 - AluY SINE Alu -12 299 1 233 292 42 33 chr10 99605435 99605555 -40711210 - L1M4 LINE L1 -2061 4085 3965 439 92 31 0 chr10 99606446 99606511 -40710254 + HY1 scRNA scRNA 1 67 -45 1238 147 0 5 chr10 99606511 99606708 -40710057 - AluSp SINE Alu 0 313 118 875 91 0 0 chr10 99606821 99606931 -40709834 - AluY SINE Alu -201 110 1 278 94 0 19 chr10 99606934 99606987 -40709778 + HY1 scRNA scRNA 60 111 -1 912 126 0 15 chr10 99607286 99607421 -40709344 + FLAM_C SINE Alu 1 133 0 24 0 0 0 chr10 99607421 99607445 -40709320 + AT_rich Low_complexity Low_complexity 1 24 0 328 221 159 0 chr10 99607606 99607719 -40709046 + MIR3 SINE MIR 45 175 -33 2031 153 0 0 chr10 99607805 99608100 -40708665 + AluSx SINE Alu 1 295 -17 616 244 44 44 chr10 99608291 99608562 -40708203 - L1MC5 LINE L1 -54 7907 7637 914 189 47 117 chr10 99608595 99608955 -40707810 + L1MC5 LINE L1 6824 7158 -803 1247 157 124 28 chr10 99608974 99609223 -40707542 - AluJb SINE Alu -39 273 1 2296 107 0 3 chr10 99609282 99609580 -40707185 - AluSx SINE Alu -15 297 1 1420 158 21 151 chr10 99609585 99610110 -40706655 - L1MC5 LINE L1 -690 7271 6815 273 261 0 0 chr10 99610869 99610934 -40705831 + MER115 DNA AcHobo 597 661 -32 210 258 21 62 chr10 99611735 99611832 -40704933 - MIR SINE MIR -1 261 169 1469 295 56 20 chr10 99611832 99612354 -40704411 - MLT1L LTR MaLR 0 615 68 2332 95 7 0 chr10 99612354 99612659 -40704106 + AluSc SINE Alu 1 307 -2 1469 295 56 20 chr10 99612659 99612730 -40704035 - MLT1L LTR MaLR -547 68 1 336 283 60 3 chr10 99612741 99612857 -40703908 - MIR SINE MIR -70 138 16 596 167 0 0 chr10 99613277 99613367 -40703398 + FLAM_A SINE Alu 26 115 -27 2268 98 3 0 chr10 99613368 99613665 -40703100 + AluSc SINE Alu 1 298 -11 467 269 45 27 chr10 99613908 99614131 -40702634 - L1ME LINE L1 -5165 1766 1540 874 182 0 0 chr10 99614133 99614276 -40702489 - AluJb SINE Alu -13 299 157 2223 74 0 14 chr10 99614299 99614615 -40702150 - AluY SINE Alu 0 312 1 2093 141 3 10 chr10 99614625 99614930 -40701835 - AluSx SINE Alu -9 303 1 2444 105 0 0 chr10 99614942 99615255 -40701510 - AluSq SINE Alu 0 313 1 265 281 32 23 chr10 99615255 99615471 -40701294 - L1ME LINE L1 -5122 1301 1142 2436 86 3 0 chr10 99615775 99616077 -40700688 + AluSp SINE Alu 1 303 -10 1268 194 19 8 chr10 99616679 99617038 -40699727 - L1MA4A LINE L1 -23 6280 5857 3874 134 36 12 chr10 99617907 99618194 -40698571 - L1MA4A LINE L1 -433 5870 5592 2190 137 0 0 chr10 99618194 99618501 -40698264 + AluSx SINE Alu 1 307 -5 3874 134 36 12 chr10 99618501 99619343 -40697422 - L1MA4A LINE L1 -711 5592 4707 290 107 71 0 chr10 99620143 99620199 -40696566 - L3 LINE CR1 -3 1574 1515 182 325 169 0 chr10 99620226 99620309 -40696456 + MIR SINE MIR 44 140 -68 1706 153 9 88 chr10 99620409 99620701 -40696064 - AluJo SINE Alu 0 418 164 2320 97 0 7 chr10 99620701 99620999 -40695766 - AluSg SINE Alu -14 296 1 1706 153 9 88 chr10 99620999 99621151 -40695614 - AluJo SINE Alu -254 164 1 1062 121 0 0 chr10 99621276 99621417 -40695348 + AluSg/x SINE Alu 133 273 -39 279 0 0 0 chr10 99621418 99621449 -40695316 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 786 97 0 0 chr10 99621448 99621561 -40695204 + (TA)n Simple_repeat Simple_repeat 2 114 0 1562 189 20 24 chr10 99621562 99621859 -40694906 - AluJo SINE Alu -16 296 1 261 229 189 33 chr10 99621861 99622014 -40694751 - L1ME4a LINE L1 -122 5999 5823 2139 137 0 0 chr10 99622022 99622328 -40694437 + AluSg SINE Alu 1 306 -4 819 153 0 8 chr10 99622328 99622447 -40694318 - AluJo/FLAM SINE Alu -184 118 1 330 288 166 5 chr10 99622945 99623150 -40693615 + MIR SINE MIR 12 249 -13 639 212 7 44 chr10 99623229 99623366 -40693399 + FLAM_A SINE Alu 1 132 -1 385 267 224 48 chr10 99623411 99623621 -40693144 - MIR SINE MIR 0 262 16 190 304 120 24 chr10 99624613 99624738 -40692027 - MIR3 SINE MIR -67 141 5 1085 199 45 119 chr10 99624802 99625223 -40691542 - MLT1B LTR MaLR 0 390 1 2279 102 7 0 chr10 99625356 99625651 -40691114 - AluSq SINE Alu -16 297 1 548 293 45 87 chr10 99625871 99626295 -40690470 + MLT1J LTR MaLR 37 442 -69 338 286 79 7 chr10 99626328 99626468 -40690297 - MER5A DNA MER1_type -30 159 10 261 0 0 0 chr10 99626507 99626536 -40690229 + (TG)n Simple_repeat Simple_repeat 1 29 0 391 230 87 16 chr10 99626686 99626812 -40689953 - MIR3 SINE MIR -54 154 20 850 239 102 59 chr10 99627011 99627471 -40689294 + MLT1J LTR MaLR 19 498 -13 680 310 87 24 chr10 99629980 99630361 -40686404 - L2 LINE L2 -1 3312 2908 441 286 137 40 chr10 99630360 99630587 -40686178 + MIR SINE MIR 12 260 -2 * 1752 155 11 0 chr10 99630970 99631248 -40685517 - AluJo SINE Alu -31 281 1 2335 96 3 0 chr10 99631318 99631619 -40685146 - AluSp SINE Alu -8 305 4 325 235 59 0 chr10 99632028 99632113 -40684652 + MIR SINE MIR 75 164 -98 2397 85 0 7 chr10 99632217 99632523 -40684242 - AluSx SINE Alu -8 304 1 611 271 103 5 chr10 99633007 99633221 -40683544 + MIR SINE MIR 26 260 -2 204 40 0 0 chr10 99633350 99633375 -40683390 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 239 233 55 14 chr10 99633389 99633462 -40683303 + MIR SINE MIR 116 191 -71 2115 121 19 13 chr10 99634143 99634450 -40682315 + AluSx SINE Alu 1 309 -3 1557 219 54 43 chr10 99637225 99637498 -40679267 + L1ME3 LINE L1 5668 5948 -214 1667 154 26 52 chr10 99637498 99637803 -40678962 + AluJb SINE Alu 1 297 -15 1557 219 54 43 chr10 99637803 99638014 -40678751 + L1ME3 LINE L1 5948 6155 -7 230 191 206 48 chr10 99638044 99638107 -40678658 - MIR SINE MIR -180 82 10 553 258 108 43 chr10 99638202 99638444 -40678321 + MIR SINE MIR 7 262 0 612 315 16 28 chr10 99639126 99639377 -40677388 - MIR SINE MIR -10 252 5 2130 130 0 3 chr10 99639414 99639722 -40677043 + AluSx SINE Alu 1 307 -5 2019 121 21 3 chr10 99640773 99641063 -40675702 - AluSc SINE Alu -14 295 1 198 250 136 0 chr10 99641296 99641384 -40675381 + MIR SINE MIR 49 148 -114 8617 53 7 9 chr10 99641545 99643402 -40673363 + L1PA6 LINE L1 4294 6154 0 2004 124 31 3 chr10 99643770 99644061 -40672704 - AluSx SINE Alu -13 299 1 343 298 148 30 chr10 99644148 99644484 -40672281 + L1ME4a LINE L1 5561 5954 -167 1861 166 0 13 chr10 99644644 99644951 -40671814 - AluJo SINE Alu -9 303 1 2531 61 0 0 chr10 99644989 99645286 -40671479 - AluY SINE Alu -14 297 1 231 339 9 0 chr10 99645699 99645814 -40670951 - L1ME LINE L1 -294 5827 5712 1232 142 0 0 chr10 99645845 99646021 -40670744 - AluSg/x SINE Alu 0 312 137 2302 96 3 0 chr10 99646021 99646314 -40670451 - AluSp SINE Alu -19 294 1 1235 179 123 11 chr10 99646318 99646586 -40670179 - AluSx SINE Alu -14 298 1 330 242 183 20 chr10 99646708 99646861 -40669904 + MIR3 SINE MIR 18 195 -13 746 224 32 23 chr10 99647295 99647514 -40669251 + MIR SINE MIR 40 260 -2 256 351 54 0 chr10 99649563 99649674 -40667091 + L2 LINE L2 3156 3272 0 193 217 133 36 chr10 99651383 99651466 -40665299 - MIR SINE MIR -69 193 103 26 50 0 0 chr10 99652956 99652996 -40663769 + AT_rich Low_complexity Low_complexity 1 40 0 2232 119 0 0 chr10 99653191 99653493 -40663272 + AluJb SINE Alu 1 302 -10 303 286 29 38 chr10 99654198 99654303 -40662462 - MER5A DNA MER1_type -29 160 57 383 321 120 11 chr10 99655624 99655808 -40660957 - MIR SINE MIR -48 214 11 1994 117 30 0 chr10 99656808 99657107 -40659658 + AluSx SINE Alu 1 308 -4 474 321 109 0 chr10 99657108 99657273 -40659492 + MIR SINE MIR 46 228 -34 251 303 45 0 chr10 99657609 99657675 -40659090 - MIR3 SINE MIR -26 182 114 2531 67 0 0 chr10 99658009 99658309 -40658456 + AluY SINE Alu 1 300 -11 2161 97 21 7 chr10 99658628 99658918 -40657847 + AluSg SINE Alu 1 294 -16 2326 88 3 3 chr10 99658922 99659229 -40657536 + AluSg SINE Alu 1 307 -3 244 234 39 0 chr10 99659655 99659732 -40657033 - MER116 DNA Mariner 0 80 1 2317 103 3 0 chr10 99660649 99660959 -40655806 - AluSp SINE Alu -2 311 1 207 292 31 31 chr10 99661631 99661696 -40655069 + MIR3 SINE MIR 94 158 -50 460 240 8 16 chr10 99661758 99661879 -40654886 + LTR33 LTR ERVL 391 510 -11 324 275 73 0 chr10 99662287 99662396 -40654369 - MER103 DNA DNA -48 118 2 291 262 68 19 chr10 99662465 99662581 -40654184 - MIR SINE MIR -93 115 7 504 230 146 24 chr10 99662583 99662748 -40654017 - MER5A DNA MER1_type -4 185 1 2288 101 0 3 chr10 99663508 99663806 -40652959 + AluSx SINE Alu 1 297 -15 1977 125 3 17 chr10 99664198 99664493 -40652272 + AluJo SINE Alu 1 291 -21 348 305 133 0 chr10 99664580 99664731 -40652034 - MIR SINE MIR -18 244 74 446 278 67 76 chr10 99665352 99665510 -40651255 - MIR SINE MIR -29 233 76 2277 96 3 10 chr10 99665510 99665811 -40650954 + AluSx SINE Alu 1 299 -13 446 278 67 76 chr10 99665811 99665875 -40650890 - MIR SINE MIR -186 76 13 571 271 47 29 chr10 99665901 99666112 -40650653 + L1MC4a LINE L1 5683 5906 -215 2315 97 7 0 chr10 99666112 99666402 -40650363 + AluSx SINE Alu 3 294 -18 571 271 47 29 chr10 99666402 99666463 -40650302 + L1MC4a LINE L1 5906 5964 -157 222 333 0 23 chr10 99668093 99668180 -40648585 + MIR SINE MIR 47 131 -77 605 230 69 52 chr10 99668369 99668543 -40648222 - MIR SINE MIR -77 185 9 21 36 0 0 chr10 99668568 99668596 -40648169 + AT_rich Low_complexity Low_complexity 1 28 0 509 259 14 14 chr10 99668598 99668741 -40648024 - MIR SINE MIR -113 149 7 195 266 46 83 chr10 99669243 99669352 -40647413 + L2 LINE L2 3168 3272 0 1607 107 70 0 chr10 99670517 99670631 -40646134 + MER30 DNA MER1_type 1 106 -124 315 0 0 0 chr10 99670631 99670666 -40646099 + (CA)n Simple_repeat Simple_repeat 2 36 0 1607 107 70 0 chr10 99670666 99670766 -40645999 + MER30 DNA MER1_type 106 230 0 242 404 9 9 chr10 99671071 99671185 -40645580 + L3 LINE CR1 36 149 -1428 189 0 0 0 chr10 99672164 99672185 -40644580 + (A)n Simple_repeat Simple_repeat 1 21 0 369 0 0 0 chr10 99672720 99672761 -40644004 + (TC)n Simple_repeat Simple_repeat 1 41 0 235 298 36 0 chr10 99672761 99672845 -40643920 - MER113 DNA MER1_type? -102 419 333 599 335 0 15 chr10 99673234 99673431 -40643334 + MIR3 SINE MIR 9 202 -6 181 343 161 40 chr10 99673453 99673727 -40643038 - L2 LINE L2 0 3272 2966 217 309 167 0 chr10 99675521 99675605 -40641160 - MIR3 SINE MIR 0 208 111 1278 187 4 40 chr10 99676179 99676430 -40640335 - AluJb SINE Alu -70 242 1 1979 153 0 0 chr10 99676432 99676720 -40640045 - AluJb SINE Alu -19 293 6 1136 110 0 24 chr10 99677492 99677656 -40639109 - AluSp SINE Alu -153 160 1 3066 198 102 55 chr10 99677702 99678446 -40638319 - L1ME2 LINE L1 -10 6154 5446 2200 129 0 13 chr10 99678446 99678757 -40638008 - AluSx SINE Alu -5 307 1 3066 198 102 55 chr10 99678757 99679208 -40637557 - L1ME2 LINE L1 -718 5446 5018 527 138 11 11 chr10 99679208 99679295 -40637470 - L1PB2 LINE L1 -7 6144 6058 3066 198 102 55 chr10 99679295 99679326 -40637439 - L1ME2 LINE L1 -1146 5018 4990 1705 144 18 21 chr10 99679326 99679611 -40637154 + AluJo SINE Alu 5 288 -24 3066 198 102 55 chr10 99679611 99680083 -40636682 - L1ME2 LINE L1 -1174 4990 4353 26 50 0 0 chr10 99680141 99680181 -40636584 + AT_rich Low_complexity Low_complexity 1 40 0 239 198 123 12 chr10 99680222 99680303 -40636462 - L1ME4a LINE L1 -150 5971 5882 235 114 0 0 chr10 99680546 99680581 -40636184 + Alu SINE Alu 112 146 -20 309 51 0 0 chr10 99680583 99680622 -40636143 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 2030 143 3 0 chr10 99680858 99681152 -40635613 - AluSx SINE Alu -17 295 1 23 0 0 0 chr10 99681214 99681237 -40635528 + AT_rich Low_complexity Low_complexity 1 23 0 307 115 250 83 chr10 99681919 99682015 -40634750 - MER112 DNA MER1_type -7 253 142 759 140 0 0 chr10 99682015 99682122 -40634643 - AluSx SINE Alu -12 300 194 1075 106 0 7 chr10 99682123 99682265 -40634500 - AluSx SINE Alu -171 141 1 493 229 43 43 chr10 99682311 99682451 -40634314 - MER112 DNA MER1_type -120 140 1 439 248 113 0 chr10 99682572 99682713 -40634052 - MIR SINE MIR -10 252 96 21 0 0 0 chr10 99682822 99682843 -40633922 + AT_rich Low_complexity Low_complexity 1 21 0 259 224 52 95 chr10 99683086 99683202 -40633563 + MIR SINE MIR 151 261 -1 210 37 0 0 chr10 99683235 99683262 -40633503 + (T)n Simple_repeat Simple_repeat 1 27 0 586 281 71 77 chr10 99683435 99683773 -40632992 - MER102b DNA MER1_type 0 341 6 2448 85 0 3 chr10 99684010 99684315 -40632450 + AluSq SINE Alu 1 304 -9 870 187 5 75 chr10 99684807 99684994 -40631771 - AluJb SINE Alu -33 279 106 241 275 55 33 chr10 99685005 99685096 -40631669 + MIR SINE MIR 156 248 -14 2229 92 0 0 chr10 99685108 99685389 -40631376 + AluSg SINE Alu 1 281 -29 3409 143 77 67 chr10 99686061 99686140 -40630625 + L1MB8 LINE L1 5424 5501 -677 2289 116 0 0 chr10 99686140 99686443 -40630322 + AluSg SINE Alu 1 303 -7 3409 143 77 67 chr10 99686443 99687039 -40629726 + L1MB8 LINE L1 5501 6109 -69 1939 163 7 0 chr10 99687039 99687339 -40629426 - AluJo SINE Alu -8 304 3 3409 143 77 67 chr10 99687339 99687405 -40629360 + L1MB8 LINE L1 6109 6173 -5 1712 133 137 0 chr10 99688486 99688756 -40628009 - AluSx SINE Alu -5 307 1 755 209 0 0 chr10 99688947 99689076 -40627689 - FLAM_A SINE Alu -1 132 4 262 209 75 0 chr10 99689096 99689163 -40627602 + L2 LINE L2 3241 3312 -1 199 267 147 13 chr10 99689732 99689807 -40626958 - L2 LINE L2 0 3272 3188 581 230 16 24 chr10 99691168 99691294 -40625471 + L2 LINE L2 3188 3312 -1 812 299 17 0 chr10 99691477 99691708 -40625057 - MIR SINE MIR 0 262 28 194 292 92 0 chr10 99692249 99692314 -40624451 - MER5A DNA MER1_type -28 161 91 25 0 0 0 chr10 99692331 99692356 -40624409 + AT_rich Low_complexity Low_complexity 1 25 0 725 260 51 10 chr10 99692362 99692558 -40624207 + AluJo SINE Alu 2 205 -107 234 0 0 0 chr10 99692658 99692684 -40624081 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1765 164 0 30 chr10 99692698 99692996 -40623769 - AluJo SINE Alu -23 289 1 618 89 13 0 chr10 99693066 99693145 -40623620 - MADE1 DNA Mariner 0 80 1 782 175 8 8 chr10 99693552 99693678 -40623087 - AluJb SINE Alu -18 294 169 419 130 0 0 chr10 99693677 99693731 -40623034 - Alu SINE Alu -257 55 2 * 1371 173 30 23 chr10 99693767 99694033 -40622732 + AluJo SINE Alu 45 312 0 2408 204 84 91 chr10 99694046 99695017 -40621748 - L1MC5 LINE L1 -64 7897 6932 2199 121 7 0 chr10 99695017 99695315 -40621450 - AluSx SINE Alu -12 300 1 2408 204 84 91 chr10 99695315 99695398 -40621367 - L1MC5 LINE L1 -1029 6932 6850 21 0 0 0 chr10 99696091 99696112 -40620653 + AT_rich Low_complexity Low_complexity 1 21 0 678 224 0 0 chr10 99696207 99696323 -40620442 - AluJo/FRAM SINE Alu -34 278 163 1883 145 3 14 chr10 99696323 99696613 -40620152 - AluJo SINE Alu -25 287 1 275 109 0 0 chr10 99696615 99696658 -40620107 - AluJo/FLAM SINE Alu -178 124 87 987 192 68 0 chr10 99696852 99697029 -40619736 + MER58A DNA MER1_type 27 215 -9 1644 159 8 4 chr10 99697032 99697296 -40619469 + AluJb SINE Alu 30 294 -18 239 315 120 0 chr10 99697310 99697402 -40619363 - MER5B DNA MER1_type -75 103 1 378 242 21 11 chr10 99698087 99698182 -40618583 + L1ME LINE L1 5515 5610 -511 4823 150 71 36 chr10 99698387 99698505 -40618260 + L1MD1 LINE L1 5150 5262 -980 2624 158 24 7 chr10 99698505 99698930 -40617835 + MSTB1 LTR MaLR 1 432 0 4823 150 71 36 chr10 99698930 99699002 -40617763 + L1MD1 LINE L1 5262 5330 -912 2246 118 3 0 chr10 99699002 99699308 -40617457 + AluSx SINE Alu 1 307 -5 4823 150 71 36 chr10 99699308 99699574 -40617191 + L1MD1 LINE L1 5330 5585 -657 2729 118 68 8 chr10 99699574 99699974 -40616791 - MSTA LTR MaLR 0 428 5 4823 150 71 36 chr10 99699974 99700574 -40616191 + L1MD1 LINE L1 5585 6242 0 2117 102 24 14 chr10 99700600 99700893 -40615872 + AluSx SINE Alu 1 296 -16 1766 177 3 7 chr10 99701055 99701354 -40615411 + AluJo SINE Alu 1 298 -14 2067 81 4 4 chr10 99702317 99702575 -40614190 - AluSc SINE Alu -13 296 39 528 258 111 62 chr10 99703174 99703270 -40613495 + MIR SINE MIR 1 91 -171 337 127 0 48 chr10 99703270 99703360 -40613405 - L1PA10 LINE L1 0 6168 6101 528 258 111 62 chr10 99703360 99703507 -40613258 + MIR SINE MIR 91 256 -6 252 0 0 0 chr10 99703832 99703860 -40612905 + (TG)n Simple_repeat Simple_repeat 2 29 0 728 191 8 0 chr10 99705529 99705660 -40611105 + FLAM_A SINE Alu 2 133 0 1740 169 117 17 chr10 99705865 99706225 -40610540 + MSTD LTR MaLR 1 396 0 2195 136 35 14 chr10 99706361 99706728 -40610037 + THE1C LTR MaLR 1 375 0 854 138 46 20 chr10 99707255 99707407 -40609358 + THE1C LTR MaLR 141 296 -79 184 239 22 22 chr10 99707680 99707726 -40609039 + L2 LINE L2 3174 3219 -94 453 215 21 97 chr10 99708826 99709012 -40607753 + MER5B DNA MER1_type 7 178 0 895 159 0 0 chr10 99709108 99709257 -40607508 - AluJb SINE Alu 0 307 159 644 91 0 0 chr10 99709264 99709352 -40607413 + L1MB7 LINE L1 6071 6158 -26 1855 151 10 17 chr10 99710751 99710907 -40605858 - AluJo SINE Alu -23 289 134 2384 82 7 0 chr10 99710907 99711200 -40605565 - AluSq SINE Alu -18 295 1 1855 151 10 17 chr10 99711200 99711334 -40605431 - AluJo SINE Alu -178 134 1 856 161 0 0 chr10 99711342 99711466 -40605299 - FLAM_C SINE Alu -17 126 3 183 133 0 0 chr10 99712868 99712898 -40603867 - L3 LINE CR1 -7 1570 1541 1040 164 0 0 chr10 99713267 99713426 -40603339 - AluJo/FRAM SINE Alu -20 292 134 2244 118 0 7 chr10 99713427 99713731 -40603034 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 99713735 99713759 -40603006 + AT_rich Low_complexity Low_complexity 1 24 0 505 125 0 0 chr10 99713961 99714033 -40602732 - FLAM_C SINE Alu -36 107 36 2443 74 0 3 chr10 99714095 99714391 -40602374 - AluY SINE Alu -16 295 1 2917 10 0 0 chr10 99715208 99715518 -40601247 - AluYa8 SINE Alu 0 310 1 2241 101 10 7 chr10 99716407 99716704 -40600061 - AluSg SINE Alu -12 298 1 2233 123 0 0 chr10 99716711 99717004 -40599761 - AluSx SINE Alu -19 293 1 187 302 16 0 chr10 99717007 99717070 -40599695 - L2 LINE L2 -1 3271 3208 1774 185 3 3 chr10 99717541 99717838 -40598927 + AluJb SINE Alu 1 297 -15 2230 98 0 14 chr10 99717838 99718133 -40598632 + AluSg SINE Alu 1 291 -19 33 25 0 0 chr10 99719574 99719614 -40597151 + AT_rich Low_complexity Low_complexity 1 40 0 351 220 93 53 chr10 99721594 99721685 -40595080 - MER103 DNA DNA -1 165 64 1925 156 0 3 chr10 99721685 99721973 -40594792 + AluJo SINE Alu 5 291 -21 351 220 93 53 chr10 99721973 99722031 -40594734 - MER103 DNA DNA -102 64 10 186 234 62 0 chr10 99722588 99722652 -40594113 - L3 LINE CR1 -354 1223 1156 575 205 193 6 chr10 99723528 99723699 -40593066 - L1ME3 LINE L1 -2 6160 5958 2508 74 6 3 chr10 99723843 99724155 -40592610 + AluSq SINE Alu 1 313 0 461 273 169 0 chr10 99725014 99725168 -40591597 + MER5A DNA MER1_type 10 189 0 188 147 0 0 chr10 99725176 99725210 -40591555 - MER5A DNA MER1_type -139 50 17 289 351 111 0 chr10 99725592 99725763 -40591002 - MIR3 SINE MIR -14 194 5 1824 142 37 14 chr10 99725817 99726113 -40590652 - AluJo SINE Alu -9 303 1 1805 137 61 4 chr10 99727006 99727283 -40589482 - AluSx SINE Alu -19 293 1 319 274 38 38 chr10 99727683 99727789 -40588976 - MIR SINE MIR -108 154 49 191 163 93 0 chr10 99727857 99727900 -40588865 - L2 LINE L2 -5 3308 3262 2097 122 3 3 chr10 99728057 99728351 -40588414 + AluSc SINE Alu 1 294 -15 1347 88 58 40 chr10 99728486 99728712 -40588053 - MER30 DNA MER1_type 0 230 1 230 257 0 29 chr10 99730387 99730457 -40586308 + GA-rich Low_complexity Low_complexity 1 68 0 847 182 49 35 chr10 99730598 99730726 -40586039 + MER3 DNA MER1_type 1 135 -74 2240 110 0 10 chr10 99730726 99731034 -40585731 - AluSx SINE Alu -7 305 1 847 182 49 35 chr10 99731034 99731108 -40585657 + MER3 DNA MER1_type 135 206 -3 455 215 28 9 chr10 99731547 99731654 -40585111 + L2 LINE L2 3190 3298 -15 180 0 0 0 chr10 99732104 99732124 -40584641 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 2102 114 11 0 chr10 99732128 99732409 -40584356 - AluSx SINE Alu -27 285 2 2660 125 27 20 chr10 99733267 99733674 -40583091 + MSTC LTR MaLR 19 428 0 3430 244 16 2 chr10 99733676 99734462 -40582303 + MSTC-int LTR MaLR 2 798 -937 1029 142 65 0 chr10 99734486 99734655 -40582110 + MSTC LTR MaLR 249 428 0 772 209 47 31 chr10 99734839 99735030 -40581735 + AluJb SINE Alu 119 312 0 2014 151 10 0 chr10 99735158 99735450 -40581315 + AluJb SINE Alu 1 295 -17 249 180 0 0 chr10 99735460 99735510 -40581255 + GA-rich Low_complexity Low_complexity 1 50 0 343 213 182 59 chr10 99735939 99736225 -40580540 + HAL1 LINE L1 971 1291 -1216 1492 174 0 81 chr10 99736232 99736553 -40580212 + AluJo SINE Alu 16 310 -2 2401 86 0 3 chr10 99736623 99736924 -40579841 - AluSq SINE Alu -13 300 1 323 291 91 39 chr10 99736930 99737005 -40579760 + L1ME3A LINE L1 2288 2358 -3788 676 187 7 58 chr10 99737005 99737144 -40579621 + FLAM_A SINE Alu 1 132 -1 323 291 91 39 chr10 99737144 99738022 -40578743 + L1ME3A LINE L1 2358 3291 -2855 1058 296 73 36 chr10 99738029 99738623 -40578142 + L1M3d LINE L1 1116 1733 -4832 2077 96 3 21 chr10 99738623 99738914 -40577851 - AluSg1 SINE Alu -23 286 1 1058 296 73 36 chr10 99738914 99739204 -40577561 + L1M3d LINE L1 1733 2011 -4554 * 2179 257 61 55 chr10 99739183 99739331 -40577434 + L1ME3A LINE L1 4559 4705 -1725 2490 83 0 0 chr10 99739331 99739633 -40577132 + AluSx SINE Alu 3 304 -8 2059 111 7 4 chr10 99739638 99739917 -40576848 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr10 99739920 99739940 -40576825 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2179 257 61 55 chr10 99739940 99741107 -40575658 + L1ME3A LINE L1 4709 5868 -562 195 42 0 0 chr10 99741107 99741131 -40575634 + (TG)n Simple_repeat Simple_repeat 1 24 0 2179 257 61 55 chr10 99741131 99741315 -40575450 + L1ME3A LINE L1 5868 6049 -381 2298 111 0 0 chr10 99741315 99741621 -40575144 - AluSx SINE Alu -6 306 1 2179 257 61 55 chr10 99741621 99741656 -40575109 + L1ME3A LINE L1 6049 6082 -348 1526 202 41 7 chr10 99741656 99741948 -40574817 + AluJb SINE Alu 1 302 -10 2179 257 61 55 chr10 99741948 99742064 -40574701 + L1ME3A LINE L1 6082 6196 -234 6128 153 54 30 chr10 99742064 99743313 -40573452 - MER52C LTR ERV1 0 1278 1 2179 257 61 55 chr10 99743313 99743418 -40573347 + L1ME3A LINE L1 6196 6299 -131 2081 146 0 13 chr10 99743418 99743734 -40573031 - AluSx SINE Alu 0 312 1 2179 257 61 55 chr10 99743734 99743816 -40572949 + L1ME3A LINE L1 6299 6422 -8 732 281 102 55 chr10 99743831 99744033 -40572732 + L1MC4a LINE L1 5437 5628 -2180 2329 110 0 0 chr10 99744033 99744341 -40572424 - AluSc SINE Alu -1 308 1 732 281 102 55 chr10 99744341 99744611 -40572154 + L1MC4a LINE L1 5628 5931 -1877 1058 194 116 22 chr10 99744922 99745190 -40571575 - L1MD2 LINE L1 -35 6324 6032 981 103 0 0 chr10 99745204 99745340 -40571425 - AluSp/q SINE Alu -4 309 174 681 165 26 0 chr10 99745440 99745555 -40571210 - AluSq/x SINE Alu -189 124 7 2139 118 7 0 chr10 99745610 99745898 -40570867 + AluSx SINE Alu 1 290 -22 398 234 95 51 chr10 99746296 99746433 -40570332 + MLT1J LTR MaLR 1 143 -368 2090 127 69 128 chr10 99746437 99746974 -40569791 + MER39B LTR ERV1 5 509 -144 565 175 9 26 chr10 99746974 99747088 -40569677 - AluJo SINE Alu 0 312 201 * 691 248 0 0 chr10 99747085 99747234 -40569531 - AluJo SINE Alu -162 150 2 787 106 20 60 chr10 99747239 99747390 -40569375 + MER39B LTR ERV1 509 653 0 2383 148 67 49 chr10 99747392 99748238 -40568527 + MER39B-int LTR ERV1 1 1499 -4447 2540 70 0 0 chr10 99748240 99748542 -40568223 + AluY SINE Alu 1 302 -9 680 186 34 0 chr10 99748542 99748660 -40568105 - AluJo/FLAM SINE Alu -190 122 1 469 178 20 0 chr10 99748663 99748764 -40568001 - L1M4 LINE L1 -1144 5002 4900 888 243 40 43 chr10 99748985 99749402 -40567363 - MLT1H LTR MaLR -39 510 7 343 227 0 0 chr10 99749411 99749486 -40567279 + MIR SINE MIR 94 168 -94 396 0 0 0 chr10 99749529 99749573 -40567192 + (ATG)n Simple_repeat Simple_repeat 3 46 0 4237 154 132 42 chr10 99749584 99750428 -40566337 - MER21A LTR ERV1 -7 924 5 249 234 124 12 chr10 99750459 99750601 -40566164 - MIR SINE MIR -10 252 29 1210 265 84 45 chr10 99752833 99753297 -40563468 - MLT1J LTR MaLR 0 511 30 2210 105 3 0 chr10 99753736 99754032 -40562733 - AluSx SINE Alu -15 297 1 285 204 116 55 chr10 99754081 99754262 -40562503 - L1ME4a LINE L1 -3 6118 5927 327 330 165 19 chr10 99755358 99755625 -40561140 + HAL1 LINE L1 403 708 -1799 2355 256 155 51 chr10 99755627 99756955 -40559810 + HAL1 LINE L1 747 2212 -295 1123 138 16 5 chr10 99757024 99757212 -40559553 + L1MA4 LINE L1 6070 6259 -41 337 282 0 48 chr10 99757395 99757498 -40559267 + L2 LINE L2 3173 3270 -2 2616 17 7 3 chr10 99757591 99757888 -40558877 + AluY SINE Alu 1 298 -13 2762 143 26 80 chr10 99757896 99758461 -40558304 + LTR49-int LTR ERV1 754 1288 -5043 365 93 0 0 chr10 99758509 99758563 -40558202 + LTR49-int LTR ERV1 1290 1343 -4988 203 147 0 0 chr10 99758687 99758721 -40558044 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 1912 156 0 13 chr10 99758866 99759173 -40557592 + AluJb SINE Alu 1 303 -9 1406 223 92 20 chr10 99760033 99760511 -40556254 - L1ME LINE L1 -3624 3333 2891 1076 144 85 0 chr10 99760511 99760699 -40556066 - L1MB7 LINE L1 -16 6168 5965 1521 220 0 3 chr10 99760707 99761007 -40555758 - AluJb SINE Alu -13 299 1 1406 223 92 20 chr10 99761007 99761173 -40555592 - L1ME LINE L1 -4072 2885 2647 1508 205 92 71 chr10 99761221 99761669 -40555096 + MSTB2 LTR MaLR 1 457 0 801 213 116 14 chr10 99761871 99762078 -40554687 + LTR40a LTR ERVL 281 508 -11 298 191 96 32 chr10 99762090 99762184 -40554581 - L1ME LINE L1 -4832 2023 1924 2402 92 0 6 chr10 99762200 99762528 -40554237 - LTR17 LTR ERV1 -454 326 1 2382 61 0 3 chr10 99762528 99762821 -40553944 - HERV17 LTR ERV1 0 8626 8335 313 0 0 0 chr10 99762814 99762850 -40553915 - HERV17 LTR ERV1 -1081 7545 7510 * 1298 55 0 12 chr10 99762846 99763010 -40553755 - HERV17 LTR ERV1 -1479 7147 6986 * 29723 43 1 2 chr10 99763002 99766480 -40550285 - HERV17 LTR ERV1 -2724 5902 2430 4786 82 2 8 chr10 99766463 99767088 -40549677 - HERV17 LTR ERV1 -6610 2016 1396 * 23 33 0 0 chr10 99767106 99767136 -40549629 + AT_rich Low_complexity Low_complexity 1 30 0 919 20 0 0 chr10 99767136 99767237 -40549528 - L1PA3 LINE L1 0 6155 6055 2570 24 0 0 chr10 99767237 99767531 -40549234 + L1PA3 LINE L1 5741 6034 -121 10743 55 47 17 chr10 99767531 99768725 -40548040 - HERV17 LTR ERV1 -7214 1412 170 2419 92 0 3 chr10 99768725 99769029 -40547736 + AluY SINE Alu 4 306 -5 10743 55 47 17 chr10 99769029 99769205 -40547560 - HERV17 LTR ERV1 -8456 170 1 3649 85 49 16 chr10 99769205 99769713 -40547052 - LTR17 LTR ERV1 0 780 256 1397 261 110 32 chr10 99769733 99770477 -40546288 - L1ME LINE L1 -4936 1961 1188 279 282 9 18 chr10 99770912 99771022 -40545743 - L1ME LINE L1 -6656 203 95 2692 188 67 7 chr10 99771031 99771642 -40545123 - L1MDa LINE L1 -4268 2272 1625 1495 146 49 0 chr10 99772956 99773202 -40543563 - Tigger2 DNA MER2_type 0 2718 2461 4874 135 11 7 chr10 99773268 99774003 -40542762 - Tigger2 DNA MER2_type -1974 744 7 1673 173 0 58 chr10 99774875 99775187 -40541578 - AluJb SINE Alu -13 299 6 242 354 57 0 chr10 99775710 99775855 -40540910 - MIR SINE MIR -69 193 42 765 198 237 0 chr10 99776023 99776230 -40540535 + LTR33 LTR ERVL 1 256 -265 782 326 19 16 chr10 99776231 99776553 -40540212 + LTR16C LTR ERVL 1 323 -168 2331 109 0 0 chr10 99776626 99776938 -40539827 - AluSx SINE Alu 0 312 1 6985 123 19 30 chr10 99777462 99778545 -40538220 - MER11C LTR ERVK 0 1071 1 4253 67 11 20 chr10 99778728 99778923 -40537842 + L1PB1 LINE L1 5602 5797 -354 276 53 0 0 chr10 99778923 99778961 -40537804 + (CA)n Simple_repeat Simple_repeat 2 39 0 4253 67 11 20 chr10 99778961 99779319 -40537446 + L1PB1 LINE L1 5797 6150 -1 359 355 42 18 chr10 99779544 99779710 -40537055 - MIR3 SINE MIR -18 190 21 1107 188 51 0 chr10 99779799 99779996 -40536769 - L1MEc LINE L1 -5634 762 556 245 200 0 40 chr10 99779998 99780048 -40536717 - L1MEc LINE L1 -5740 656 609 1901 219 110 46 chr10 99780057 99780641 -40536124 - L1MEc LINE L1 -5740 656 36 331 182 39 13 chr10 99780845 99780922 -40535843 + MER31B LTR ERV1 1 79 -387 650 220 63 11 chr10 99781022 99781213 -40535552 + MER31B LTR ERV1 227 427 -39 180 333 29 38 chr10 99781541 99781646 -40535119 - MIR3 SINE MIR -9 199 96 2444 75 0 13 chr10 99781721 99782029 -40534736 + AluY SINE Alu 1 304 -7 334 298 154 29 chr10 99782041 99782249 -40534516 - L3 LINE CR1 -494 1083 850 2299 116 0 0 chr10 99782845 99783156 -40533609 + AluSx SINE Alu 2 312 0 234 0 0 0 chr10 99783538 99783564 -40533201 + (C)n Simple_repeat Simple_repeat 1 26 0 438 219 41 48 chr10 99783808 99783954 -40532811 + L1ME LINE L1 5591 5735 -386 1273 60 0 0 chr10 99783988 99784171 -40532594 - AluY SINE Alu 0 313 131 1479 193 0 40 chr10 99784179 99784479 -40532286 - AluJo SINE Alu -24 288 1 937 171 55 40 chr10 99784905 99785104 -40531661 - MER20 DNA MER1_type 0 219 18 371 311 49 16 chr10 99786336 99786458 -40530307 - MER5A DNA MER1_type -60 129 4 211 222 88 32 chr10 99786475 99786570 -40530195 - L2 LINE L2 -270 3002 2894 261 313 30 10 chr10 99786577 99786676 -40530089 + MIR3 SINE MIR 98 198 -10 259 380 146 11 chr10 99787264 99787640 -40529125 - L2 LINE L2 -793 2521 2095 1621 104 36 0 chr10 99787731 99787951 -40528814 - MER30 DNA MER1_type 0 230 3 2256 84 24 3 chr10 99789264 99789560 -40527205 + AluSx SINE Alu 1 302 -10 243 254 0 0 chr10 99789899 99789954 -40526811 - L2 LINE L2 -2919 395 341 1095 64 0 7 chr10 99789990 99790119 -40526646 - L1PA5 LINE L1 -233 5922 5793 1922 40 14 0 chr10 99790119 99790337 -40526428 + L1PA5 LINE L1 5921 6145 -9 1095 64 0 7 chr10 99790337 99790348 -40526417 - L1PA4 LINE L1 -362 5793 5783 509 157 120 0 chr10 99792355 99792463 -40524302 + MIR SINE MIR 140 260 -2 225 209 45 0 chr10 99792903 99792970 -40523795 - L3b LINE CR1 -380 1203 1134 28 61 0 0 chr10 99793328 99793377 -40523388 + AT_rich Low_complexity Low_complexity 1 49 0 495 306 32 19 chr10 99793377 99793534 -40523231 + MIR3 SINE MIR 2 160 -48 416 242 189 0 chr10 99793621 99793753 -40523012 - MER103 DNA DNA -9 157 1 219 265 29 15 chr10 99793801 99793869 -40522896 + MIR3 SINE MIR 133 201 -7 3385 30 0 0 chr10 99794179 99794549 -40522216 - L1PA3 LINE L1 -3 6152 5783 872 75 0 0 chr10 99794905 99795012 -40521753 + AluY SINE Alu 1 107 -204 1941 151 7 7 chr10 99795547 99795846 -40520919 - AluJb SINE Alu -13 299 1 656 270 39 86 chr10 99796903 99797285 -40519480 + L2 LINE L2 2907 3270 -43 390 256 12 0 chr10 99797673 99797759 -40519006 - MLT1L LTR MaLR -103 512 426 377 236 279 6 chr10 99797835 99798000 -40518765 - MLT1L LTR MaLR -363 252 43 2237 114 0 0 chr10 99798379 99798677 -40518088 - AluSc SINE Alu -8 301 4 2139 123 0 0 chr10 99798677 99798977 -40517788 - AluSg SINE Alu -10 300 1 5648 65 0 0 chr10 99801022 99801731 -40515034 - L1P LINE L1 -4039 2107 1399 3161 83 5 5 chr10 99801733 99802154 -40514611 + L1PB1 LINE L1 5340 5760 -391 262 147 0 59 chr10 99802154 99802222 -40514543 - LTR66 LTR ERVL -153 457 394 475 127 65 8 chr10 99802224 99802341 -40514424 + L1PB1 LINE L1 5774 5845 -306 204 163 0 0 chr10 99802365 99802408 -40514357 + (TA)n Simple_repeat Simple_repeat 2 44 0 226 305 21 50 chr10 99803244 99803385 -40513380 - L2 LINE L2 -18 3295 3159 24 0 0 0 chr10 99803509 99803533 -40513232 + GC_rich Low_complexity Low_complexity 1 24 0 803 80 36 18 chr10 99803545 99803657 -40513108 + AluY SINE Alu 52 165 -146 365 302 140 25 chr10 99803875 99804190 -40512575 - L2 LINE L2 -1145 2169 1819 6644 90 26 0 chr10 99805033 99806002 -40510763 - L1PA13 LINE L1 -4 6159 5167 4206 165 60 54 chr10 99806002 99806966 -40509799 - MER11C LTR ERVK -2 1069 100 736 218 191 16 chr10 99807391 99807579 -40509186 + MIR SINE MIR 32 252 -10 381 313 10 0 chr10 99808451 99808547 -40508218 - MER91 DNA MER1_type -56 140 44 492 307 188 0 chr10 99808906 99809124 -40507641 - MIR SINE MIR 0 262 4 740 243 7 0 chr10 99809165 99809301 -40507464 + FAM SINE Alu 5 141 -44 25 0 0 0 chr10 99809321 99809346 -40507419 + AT_rich Low_complexity Low_complexity 1 25 0 183 391 0 0 chr10 99809388 99809452 -40507313 - L2 LINE L2 -219 3053 2990 2744 35 0 3 chr10 99809970 99810281 -40506484 - AluY SINE Alu -1 310 1 582 196 216 0 chr10 99810442 99810590 -40506175 - MER5A DNA MER1_type 0 189 10 2329 50 0 20 chr10 99810885 99811187 -40505578 - L1P LINE L1 -1989 4157 3862 * 17994 112 16 14 chr10 99811169 99813838 -40502927 - L1P LINE L1 -3462 2684 11 343 280 134 54 chr10 99813918 99814104 -40502661 + L1ME LINE L1 5338 5538 -583 252 185 19 0 chr10 99814124 99814178 -40502587 - HAL1 LINE L1 -1345 1162 1108 334 311 83 23 chr10 99814480 99814612 -40502153 + L3 LINE CR1 1056 1195 -382 206 323 118 31 chr10 99815045 99815172 -40501593 + MIR3 SINE MIR 6 143 -65 248 51 0 26 chr10 99815178 99815217 -40501548 + (TG)n Simple_repeat Simple_repeat 2 39 0 597 285 0 1 chr10 99817438 99817609 -40499156 + MIR SINE MIR 40 208 -54 685 292 71 13 chr10 99817855 99818081 -40498684 + MIR SINE MIR 12 250 -12 462 187 89 24 chr10 99819075 99819198 -40497567 - MIR SINE MIR -58 204 74 24 0 0 0 chr10 99819420 99819444 -40497321 + AT_rich Low_complexity Low_complexity 1 24 0 2341 90 0 0 chr10 99819559 99819859 -40496906 - AluSg SINE Alu -10 300 1 246 280 72 40 chr10 99819863 99819964 -40496801 + L2 LINE L2 2926 3033 -239 2580 110 115 3 chr10 99819964 99820347 -40496418 - MSTB LTR MaLR 0 426 1 246 280 72 40 chr10 99820347 99820370 -40496395 + L2 LINE L2 3033 3054 -218 1350 249 132 31 chr10 99820463 99821008 -40495757 + L2 LINE L2 2437 3035 -278 2986 209 105 65 chr10 99821008 99822192 -40494573 + L1MC5 LINE L1 6682 7912 -49 2061 123 10 0 chr10 99822430 99822723 -40494042 + AluSx SINE Alu 1 296 -16 582 243 30 30 chr10 99824008 99824177 -40492588 - MER5B DNA MER1_type -3 175 7 319 328 40 35 chr10 99824197 99824371 -40492394 + MIR SINE MIR 82 256 -6 182 277 0 46 chr10 99824790 99824855 -40491910 + L2 LINE L2 3210 3271 -1 1751 155 26 23 chr10 99825119 99825423 -40491342 + AluJo SINE Alu 1 305 -7 37 0 0 0 chr10 99825580 99825617 -40491148 + AT_rich Low_complexity Low_complexity 1 37 0 1301 218 10 14 chr10 99825632 99825925 -40490840 + L1MC3 LINE L1 5952 6243 -1542 297 167 0 0 chr10 99826080 99826134 -40490631 + A-rich Low_complexity Low_complexity 1 54 0 8334 128 10 43 chr10 99826997 99828210 -40488555 + Tigger1 DNA MER2_type 1 1166 -1252 1861 139 24 7 chr10 99828210 99828498 -40488267 + AluSx SINE Alu 1 293 -19 8334 128 10 43 chr10 99828498 99828649 -40488116 + Tigger1 DNA MER2_type 1166 1320 -1098 306 188 47 20 chr10 99828749 99828838 -40487927 - Alu SINE Alu -247 53 2 22 56 0 0 chr10 99828917 99828953 -40487812 + AT_rich Low_complexity Low_complexity 1 36 0 472 228 65 16 chr10 99829617 99829740 -40487025 - L2 LINE L2 -10 3262 3134 2025 135 0 7 chr10 99829889 99830186 -40486579 - AluSx SINE Alu -17 295 1 331 231 0 15 chr10 99830584 99830649 -40486116 + L2 LINE L2 3248 3311 -2 6597 103 28 14 chr10 99831407 99832360 -40484405 - Tigger1 DNA MER2_type 0 2418 1452 3541 70 4 17 chr10 99832470 99832929 -40483836 + SVA Other Other 931 1383 -3 5059 146 8 7 chr10 99833124 99833959 -40482806 + L1P LINE L1 3547 4382 -1764 14469 139 12 20 chr10 99834008 99836396 -40480369 + L1P LINE L1 11 2378 -3768 946 161 34 0 chr10 99836500 99836649 -40480116 - AluJo SINE Alu -158 154 1 228 352 79 32 chr10 99836918 99837134 -40479631 + L2 LINE L2 2439 2664 -650 4435 194 44 4 chr10 99837137 99837953 -40478812 + MER21B LTR ERV1 4 852 -11 591 276 248 19 chr10 99838385 99838696 -40478069 - L2 LINE L2 -1 3312 2931 3728 126 93 0 chr10 99838752 99839332 -40477433 - LTR24C LTR ERV1 -1 634 1 402 244 12 0 chr10 99839333 99839419 -40477346 + L2 LINE L2 3226 3312 -1 222 317 110 0 chr10 99839447 99839529 -40477236 + L2 LINE L2 3203 3293 -20 1358 164 44 0 chr10 99840496 99840722 -40476043 - MER46A DNA MER2_type 0 236 1 215 339 111 23 chr10 99840760 99840931 -40475834 - L2 LINE L2 -1392 1922 1737 19591 49 2 1 chr10 99841238 99843764 -40473001 - L1P3 LINE L1 -654 5518 2991 326 182 9 109 chr10 99843912 99844022 -40472743 - L1MC5 LINE L1 -141 7820 7722 1401 322 159 25 chr10 99844036 99844985 -40471780 + L3 LINE CR1 455 1530 -47 357 206 19 84 chr10 99845006 99845113 -40471652 - MER5B DNA MER1_type -11 167 68 220 235 0 20 chr10 99845128 99845179 -40471586 + L3 LINE CR1 1517 1566 -11 558 229 9 0 chr10 99845458 99845563 -40471202 + MER81 DNA DNA 7 112 -2 2708 156 31 35 chr10 99845581 99846093 -40470672 - LTR54 LTR ERV1 0 510 1 1081 148 40 0 chr10 99846839 99847015 -40469750 + MER5A DNA MER1_type 1 183 -6 30 0 0 0 chr10 99847730 99847760 -40469005 + AT_rich Low_complexity Low_complexity 1 30 0 2177 126 0 0 chr10 99848147 99848440 -40468325 + AluSx SINE Alu 1 293 -19 2334 85 3 3 chr10 99848460 99848765 -40468000 + AluSq SINE Alu 1 305 -8 352 267 0 11 chr10 99849548 99849638 -40467127 - L2 LINE L2 -1 3312 3224 282 217 0 0 chr10 99850307 99850376 -40466389 + GA-rich Low_complexity Low_complexity 2 70 0 670 203 0 0 chr10 99850954 99851072 -40465693 + MER54B LTR ERVL 3 120 -673 2318 103 0 0 chr10 99851072 99851372 -40465393 - AluSx SINE Alu -12 300 1 228 296 176 9 chr10 99851375 99851483 -40465282 - MIR SINE MIR -63 145 20 259 269 65 28 chr10 99851487 99851595 -40465170 - LTR16C LTR ERVL 0 491 380 342 324 62 55 chr10 99852008 99852108 -40464657 - L2 LINE L2 -166 3106 3008 2517 124 60 36 chr10 99852108 99852526 -40464239 + MSTC LTR MaLR 1 428 0 342 324 62 55 chr10 99852526 99852700 -40464065 - L2 LINE L2 -264 3008 2830 486 207 34 178 chr10 99852751 99852889 -40463876 + MER5B DNA MER1_type 1 101 -77 2336 88 10 0 chr10 99852889 99853183 -40463582 + AluSx SINE Alu 3 299 -13 486 207 34 178 chr10 99853183 99853252 -40463513 + MER5B DNA MER1_type 101 178 0 211 331 185 38 chr10 99853252 99853421 -40463344 - L2 LINE L2 -570 2744 2549 476 295 88 37 chr10 99853689 99853906 -40462859 + MIR SINE MIR 23 250 -12 278 286 112 37 chr10 99854260 99854421 -40462344 - L2 LINE L2 0 3313 3141 218 326 14 41 chr10 99854584 99854731 -40462034 + MER5A DNA MER1_type 47 189 0 595 291 66 14 chr10 99855039 99855252 -40461513 + MIR SINE MIR 22 245 -17 700 111 77 0 chr10 99855553 99855670 -40461095 + L1MB3 LINE L1 6057 6182 -1 1088 177 86 111 chr10 99855987 99856393 -40460372 - MSTD LTR MaLR 0 396 1 250 163 20 20 chr10 99856475 99856524 -40460241 - MIR3 SINE MIR -21 187 139 263 269 46 109 chr10 99856524 99856699 -40460066 - L2 LINE L2 0 3313 3150 2719 70 32 0 chr10 99857451 99857793 -40458972 + THE1A LTR MaLR 1 353 -2 10407 104 15 18 chr10 99857793 99859262 -40457503 + THE1A-int LTR MaLR 9 1473 -107 530 341 17 0 chr10 99859532 99859708 -40457057 + MER5A DNA MER1_type 4 182 -7 202 345 62 9 chr10 99860148 99860261 -40456504 - L2 LINE L2 -173 3099 2981 249 33 0 0 chr10 99860306 99860336 -40456429 + (TAGTG)n Simple_repeat Simple_repeat 3 32 0 244 345 40 17 chr10 99860345 99860519 -40456246 - L2 LINE L2 -455 2859 2682 277 287 112 54 chr10 99861524 99861747 -40455018 + MLT1H LTR MaLR 53 288 -261 1680 158 42 14 chr10 99862130 99862415 -40454350 + AluJb SINE Alu 1 293 -19 566 187 187 0 chr10 99862787 99862953 -40453812 + MER33 DNA MER1_type 2 198 -126 312 186 0 71 chr10 99862965 99863035 -40453730 + LTR33 LTR ERVL 457 521 0 23 54 0 0 chr10 99863051 99863088 -40453677 + AT_rich Low_complexity Low_complexity 1 37 0 2412 97 0 0 chr10 99863191 99863499 -40453266 + AluSx SINE Alu 1 308 -4 254 226 60 24 chr10 99864078 99864162 -40452603 + MIR SINE MIR 126 212 -50 559 242 20 13 chr10 99864548 99864701 -40452064 + MIR SINE MIR 91 244 -18 995 239 78 4 chr10 99865448 99865703 -40451062 + L1ME3 LINE L1 5864 6137 -25 698 210 5 65 chr10 99866079 99866265 -40450500 + MER5B DNA MER1_type 1 175 -3 392 225 0 22 chr10 99866316 99866405 -40450360 - MER5B DNA MER1_type -2 176 90 514 319 50 8 chr10 99866957 99867193 -40449572 - MIR SINE MIR 0 262 17 687 140 147 20 chr10 99867193 99867343 -40449422 - MER5A DNA MER1_type 0 189 21 303 304 152 29 chr10 99867432 99867603 -40449162 - MIR3 SINE MIR -9 199 8 2308 85 0 3 chr10 99868036 99868329 -40448436 + AluY SINE Alu 1 292 -19 21 0 0 0 chr10 99869226 99869247 -40447518 + AT_rich Low_complexity Low_complexity 1 21 0 191 293 192 0 chr10 99870006 99870105 -40446660 - L2 LINE L2 -214 3058 2941 * 610 195 32 24 chr10 99870101 99870224 -40446541 - L2 LINE L2 -3 3310 3187 527 237 154 6 chr10 99870339 99870508 -40446257 - MIR SINE MIR -13 249 56 193 298 12 24 chr10 99870530 99870614 -40446151 - L2 LINE L2 -493 2821 2739 263 146 18 0 chr10 99871651 99871706 -40445059 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 534 271 81 36 chr10 99871837 99872084 -40444681 - MIR SINE MIR -3 259 2 2062 94 3 38 chr10 99873196 99873484 -40443281 + AluSx SINE Alu 35 312 0 193 229 0 42 chr10 99873555 99873603 -40443162 + L3b LINE CR1 1279 1324 -259 2406 78 0 3 chr10 99873782 99874076 -40442689 + AluSx SINE Alu 1 293 -19 32 0 0 0 chr10 99874110 99874142 -40442623 + AT_rich Low_complexity Low_complexity 1 32 0 241 285 99 20 chr10 99874807 99874958 -40441807 - MLT1L LTR MaLR -9 606 444 2072 202 28 5 chr10 99875011 99875402 -40441363 - L1M3f LINE L1 -4626 702 303 1838 156 0 0 chr10 99875502 99875790 -40440975 - L1M3f LINE L1 -5034 294 7 461 348 102 15 chr10 99875792 99876125 -40440640 - MLT1L LTR MaLR -253 362 1 1790 68 0 18 chr10 99878144 99878366 -40438399 + AluY SINE Alu 84 301 -10 238 217 17 17 chr10 99879312 99879372 -40437393 + GA-rich Low_complexity Low_complexity 1 60 0 359 259 298 0 chr10 99880543 99880674 -40436091 - MER5A DNA MER1_type -2 187 18 336 278 92 99 chr10 99933583 99934226 -40382539 - L1M4 LINE L1 -2746 3400 2763 2148 80 7 7 chr10 99934712 99935013 -40381752 - L1PA13 LINE L1 0 6163 5863 415 38 0 0 chr10 99935114 99935167 -40381598 - L1PA13 LINE L1 -266 5897 5845 2964 203 64 25 chr10 99935749 99936762 -40380003 - L1ME1 LINE L1 -6 6229 5175 1988 217 62 39 chr10 99936750 99937542 -40379223 - L1ME1 LINE L1 -3647 2568 1806 * 21 0 0 0 chr10 99937630 99937651 -40379114 + AT_rich Low_complexity Low_complexity 1 21 0 741 310 73 12 chr10 99939141 99939386 -40377379 + MIR SINE MIR 2 261 -1 957 202 0 6 chr10 99939389 99939557 -40377208 - AluJb SINE Alu -23 289 123 363 44 0 0 chr10 99939564 99939609 -40377156 + (CA)n Simple_repeat Simple_repeat 2 46 0 41 48 0 0 chr10 99941289 99941351 -40375414 + AT_rich Low_complexity Low_complexity 1 62 0 611 316 27 38 chr10 99941351 99941614 -40375151 + MIR SINE MIR 3 262 0 24 53 0 0 chr10 99941709 99941747 -40375018 + AT_rich Low_complexity Low_complexity 1 38 0 529 176 19 0 chr10 99942149 99942257 -40374508 - MER53 DNA DNA -79 110 1 421 234 132 106 chr10 99942868 99942904 -40373861 - Charlie8 DNA MER1_type -69 272 238 2128 93 3 50 chr10 99942904 99943206 -40373559 - AluSc SINE Alu -21 288 1 421 234 132 106 chr10 99943206 99943434 -40373331 - Charlie8 DNA MER1_type -103 238 1 394 232 104 24 chr10 99944340 99944465 -40372300 + MIR SINE MIR 124 258 -4 2247 95 13 3 chr10 99944543 99944847 -40371918 - AluSq SINE Alu -6 307 1 1468 188 76 0 chr10 99945479 99945595 -40371170 + AluJo SINE Alu 2 108 -204 252 0 0 0 chr10 99945595 99945623 -40371142 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1468 188 76 0 chr10 99945623 99945782 -40370983 + AluJo SINE Alu 108 298 -14 241 272 111 0 chr10 99945782 99945863 -40370902 + MIR SINE MIR 60 149 -113 289 269 169 31 chr10 99945863 99946023 -40370742 + MIR SINE MIR 68 249 -13 381 310 127 0 chr10 99946323 99946481 -40370284 - MER91B DNA MER1_type -12 178 1 222 128 0 0 chr10 99946545 99946584 -40370181 + (T)n Simple_repeat Simple_repeat 1 39 0 1675 174 16 44 chr10 99946615 99946932 -40369833 - AluJb SINE Alu 0 312 5 401 215 194 42 chr10 99947213 99947357 -40369408 + MER5B DNA MER1_type 13 178 0 180 200 0 0 chr10 99948432 99948472 -40368293 + GA-rich Low_complexity Low_complexity 2 41 0 409 303 98 32 chr10 99948527 99948581 -40368184 + L1ME2 LINE L1 5388 5437 -733 1554 192 0 22 chr10 99948581 99948899 -40367866 + AluJo SINE Alu 2 312 0 409 303 98 32 chr10 99948899 99949246 -40367519 + L1ME2 LINE L1 5437 5828 -342 515 200 0 0 chr10 99949285 99949380 -40367385 + MER5B DNA MER1_type 84 178 0 307 309 11 0 chr10 99949400 99949494 -40367271 + L1ME2 LINE L1 5845 5939 -225 2156 117 7 13 chr10 99949865 99950163 -40366602 + AluSx SINE Alu 1 296 -16 284 330 124 49 chr10 99950483 99950910 -40365855 - L2 LINE L2 -5 3308 2850 785 203 33 16 chr10 99951575 99951757 -40365008 - MER5A DNA MER1_type 0 189 5 276 100 0 0 chr10 99952063 99952103 -40364662 + (TG)n Simple_repeat Simple_repeat 1 40 0 589 159 172 32 chr10 99952198 99952355 -40364410 - MIR SINE MIR 0 262 84 1508 174 62 24 chr10 99952861 99952984 -40363781 + AluJo SINE Alu 6 123 -189 471 60 0 0 chr10 99952984 99953051 -40363714 + (TA)n Simple_repeat Simple_repeat 2 68 0 1508 174 62 24 chr10 99953051 99953215 -40363550 + AluJo SINE Alu 123 304 -8 316 284 203 14 chr10 99953809 99953957 -40362808 + MER5B DNA MER1_type 2 177 -1 341 206 130 22 chr10 99954148 99954240 -40362525 - L2 LINE L2 -42 3271 3170 2377 88 0 0 chr10 99954670 99954967 -40361798 + AluSq SINE Alu 1 297 -16 6597 115 31 10 chr10 99955361 99957071 -40359694 + L1MA2 LINE L1 4532 6283 -21 633 49 0 0 chr10 99957071 99957152 -40359613 + (TA)n Simple_repeat Simple_repeat 1 81 0 6597 115 31 10 chr10 99957152 99957175 -40359590 + L1MA2 LINE L1 6283 6304 0 551 208 33 0 chr10 99957441 99957561 -40359204 + MER2 DNA MER2_type 1 124 -221 2025 154 6 10 chr10 99957629 99957941 -40358824 - AluJo SINE Alu -1 311 1 432 224 0 0 chr10 99957953 99958029 -40358736 + MER2 DNA MER2_type 270 345 0 265 247 37 25 chr10 99958033 99958114 -40358651 + L2 LINE L2 2272 2353 -961 521 110 0 0 chr10 99958430 99958503 -40358262 - MLT1A1 LTR MaLR -47 318 246 398 333 93 29 chr10 99958717 99958921 -40357844 + MIR SINE MIR 46 262 0 462 336 16 8 chr10 99958924 99959049 -40357716 - L2 LINE L2 -32 3240 3115 486 162 101 0 chr10 99959415 99959514 -40357251 + MIR SINE MIR 126 234 -28 649 256 6 41 chr10 99960149 99960340 -40356425 + MER5A DNA MER1_type 1 174 -4 593 273 83 67 chr10 99961659 99961959 -40354806 - L2 LINE L2 -1 3312 3008 545 278 129 45 chr10 99961972 99962147 -40354618 - MLT1J LTR MaLR -8 503 344 1049 169 16 6 chr10 99962147 99962330 -40354435 - MER5A DNA MER1_type 0 189 5 545 278 129 45 chr10 99962330 99962618 -40354147 - MLT1J LTR MaLR -167 344 1 441 290 278 4 chr10 99962618 99962856 -40353909 - L2 LINE L2 -307 3006 2716 3998 229 64 53 chr10 99963404 99963536 -40353229 - L1MDb LINE L1 -3497 3043 2914 1511 128 0 0 chr10 99963536 99963739 -40353026 - AluSg/x SINE Alu -21 289 87 3998 229 64 53 chr10 99963739 99964051 -40352714 - L1MDb LINE L1 -3626 2914 2607 2224 108 0 3 chr10 99964051 99964346 -40352419 - AluSc SINE Alu -15 294 1 3998 229 64 53 chr10 99964346 99965080 -40351685 - L1MDb LINE L1 -3933 2607 1883 2234 125 18 0 chr10 99965080 99965423 -40351342 - L1PA16 LINE L1 -9 6157 5809 3998 229 64 53 chr10 99965423 99965595 -40351170 - L1MDb LINE L1 -4657 1883 1714 2039 144 0 0 chr10 99965595 99965886 -40350879 - AluSx SINE Alu -21 291 1 3998 229 64 53 chr10 99965886 99966686 -40350079 - L1MDb LINE L1 -4826 1714 909 310 273 119 42 chr10 99967175 99967318 -40349447 - L1MDb LINE L1 -6203 337 184 301 271 42 0 chr10 99967346 99967442 -40349323 - L1ME LINE L1 -5923 147 48 284 79 0 0 chr10 99967470 99967508 -40349257 - MLT2C1 LTR ERVL -7 390 353 332 289 0 8 chr10 99967509 99967630 -40349135 + (TA)n Simple_repeat Simple_repeat 2 121 0 1422 193 106 53 chr10 99967630 99968045 -40348720 - MLT2B1 LTR ERVL -83 437 1 333 371 16 0 chr10 99968247 99968371 -40348394 - L2 LINE L2 -596 2718 2593 270 317 78 0 chr10 99968466 99968608 -40348157 + L1MC4a LINE L1 5786 5938 -1870 303 28 0 0 chr10 99968617 99968653 -40348112 + (TA)n Simple_repeat Simple_repeat 2 37 0 238 305 128 28 chr10 99969047 99969188 -40347577 + L2 LINE L2 2851 3005 -308 469 277 167 43 chr10 99969303 99969446 -40347319 + L2 LINE L2 2907 3031 -282 2299 111 0 0 chr10 99969446 99969752 -40347013 - AluSx SINE Alu -6 306 1 469 277 167 43 chr10 99969752 99969890 -40346875 + L2 LINE L2 3031 3223 -90 477 241 86 40 chr10 99972885 99973059 -40343706 + MIR SINE MIR 60 241 -21 21 0 0 0 chr10 99973766 99973787 -40342978 + AT_rich Low_complexity Low_complexity 1 21 0 581 80 0 0 chr10 99973898 99973973 -40342792 - AluS SINE Alu -238 75 1 233 383 106 0 chr10 99974522 99974616 -40342149 - L2 LINE L2 -5 3308 3205 184 348 147 11 chr10 99975076 99975260 -40341505 + L2 LINE L2 3047 3255 -17 1571 170 47 4 chr10 99975403 99975679 -40341086 + AluJb SINE Alu 1 288 -24 5204 59 15 3 chr10 99975813 99976486 -40340279 - L1PA11 LINE L1 -2 6172 5492 4121 167 49 23 chr10 99976486 99977130 -40339635 - L1MB3 LINE L1 -24 6159 5471 225 0 0 0 chr10 99977130 99977155 -40339610 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4121 167 49 23 chr10 99977155 99977510 -40339255 - L1MB3 LINE L1 -712 5471 5127 210 71 0 0 chr10 99977510 99977538 -40339227 + (T)n Simple_repeat Simple_repeat 1 28 0 297 239 11 11 chr10 99977581 99977669 -40339096 - L1P LINE L1 -2455 3691 3604 23 0 0 0 chr10 99978546 99978569 -40338196 + AT_rich Low_complexity Low_complexity 1 23 0 293 277 45 114 chr10 99978639 99978841 -40337924 + MER5A DNA MER1_type 2 189 0 1016 201 14 32 chr10 99978849 99979068 -40337697 + MER20 DNA MER1_type 1 215 -4 196 324 118 15 chr10 99981328 99981464 -40335301 + MIR SINE MIR 111 260 -2 355 249 267 31 chr10 99981751 99981976 -40334789 - L1MC/D LINE L1 -2272 5536 5259 213 348 45 0 chr10 99981999 99982088 -40334677 - L3 LINE CR1 -1 1576 1484 2592 44 0 0 chr10 99984068 99984363 -40332402 + AluY SINE Alu 1 295 -16 1889 165 0 0 chr10 99989834 99990119 -40326646 + AluSx SINE Alu 7 291 -21 2131 137 106 3 chr10 99990517 99990903 -40325862 - MSTB LTR MaLR 0 426 1 992 201 0 16 chr10 99990912 99991101 -40325664 - AluJb SINE Alu -41 271 86 1549 188 49 0 chr10 99991119 99991465 -40325300 - L1MC3 LINE L1 -13 7772 7410 2028 143 3 0 chr10 99991583 99991883 -40324882 + AluJb SINE Alu 1 301 -11 585 310 94 24 chr10 99991885 99992140 -40324625 + L3 LINE CR1 948 1220 -357 1789 130 27 20 chr10 99992294 99992587 -40324178 + AluSp SINE Alu 1 295 -18 2422 150 10 5 chr10 99994160 99994573 -40322192 - L1MC1 LINE L1 0 6333 5919 2299 99 0 7 chr10 99995460 99995764 -40321001 - AluSq SINE Alu -11 302 1 204 278 0 0 chr10 99996590 99996662 -40320103 + CT-rich Low_complexity Low_complexity 1 72 0 1876 99 32 0 chr10 99996928 99997180 -40319585 + AluSq SINE Alu 1 260 -53 180 0 0 0 chr10 99997193 99997213 -40319552 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 197 308 66 22 chr10 99997765 99997856 -40318909 - MIR SINE MIR -51 211 117 2258 123 0 0 chr10 99998126 99998435 -40318330 - AluSx SINE Alu -3 309 1 352 331 71 19 chr10 99999048 99999202 -40317563 - L2 LINE L2 -273 2999 2838 2004 147 7 7 chr10 99999208 99999514 -40317251 + AluSx SINE Alu 1 306 -6 514 258 98 40 chr10 100002555 100002780 -40313985 + MIR SINE MIR 12 249 -13 29 0 0 0 chr10 100002816 100002845 -40313920 + AT_rich Low_complexity Low_complexity 1 29 0 333 0 0 0 chr10 100003334 100003371 -40313394 + (CA)n Simple_repeat Simple_repeat 2 38 0 249 159 0 0 chr10 100003736 100003780 -40312985 + (CTA)n Simple_repeat Simple_repeat 3 46 0 494 195 49 32 chr10 100003780 100003903 -40312862 - MIR SINE MIR -2 260 136 824 124 44 7 chr10 100004067 100004204 -40312561 + L1MB8 LINE L1 5538 5679 -499 885 181 0 11 chr10 100004206 100004383 -40312382 + L1MB8 LINE L1 6003 6177 -1 519 259 173 5 chr10 100004456 100004641 -40312124 + MIR SINE MIR 47 262 0 504 219 0 10 chr10 100004696 100004792 -40311973 + MER5B DNA MER1_type 1 95 -83 477 355 190 7 chr10 100005288 100005741 -40311024 + L2 LINE L2 1829 2364 -950 21 0 0 0 chr10 100006372 100006393 -40310372 + AT_rich Low_complexity Low_complexity 1 21 0 1301 139 76 99 chr10 100006628 100007010 -40309755 - L1MC/D LINE L1 -2359 5636 5264 225 132 0 0 chr10 100007013 100007051 -40309714 + (TA)n Simple_repeat Simple_repeat 2 39 0 2021 146 10 0 chr10 100007616 100007911 -40308854 - AluSx SINE Alu -14 298 1 1834 179 3 3 chr10 100008344 100008640 -40308125 + AluJb SINE Alu 1 296 -16 691 269 107 58 chr10 100009398 100009720 -40307045 - L1M4 LINE L1 -2271 4111 3806 1037 168 16 0 chr10 100009720 100009905 -40306860 - MER5A DNA MER1_type -1 188 1 691 269 107 58 chr10 100009905 100010340 -40306425 - L1M4 LINE L1 -2576 3806 3317 * 1384 162 52 3 chr10 100010332 100010640 -40306125 - L1M4 LINE L1 -5089 1295 973 1930 165 0 3 chr10 100010650 100010947 -40305818 - AluSx SINE Alu -16 296 1 4928 134 14 42 chr10 100010966 100011295 -40305470 - L1M3d LINE L1 -4902 1401 1064 2414 108 0 0 chr10 100011295 100011602 -40305163 + AluSx SINE Alu 1 307 -5 4928 134 14 42 chr10 100011602 100012180 -40304585 - L1M3d LINE L1 -5239 1064 113 1312 151 0 5 chr10 100012292 100012504 -40304261 - MER2 DNA MER2_type -134 211 1 491 189 9 27 chr10 100012505 100012616 -40304149 - L1M3d LINE L1 -6271 113 5 391 297 35 87 chr10 100012602 100013121 -40303644 - L1MEd LINE L1 -5159 960 469 * 193 352 83 19 chr10 100013543 100013651 -40303114 + L2 LINE L2 3155 3269 -3 258 316 38 21 chr10 100014382 100014619 -40302146 + L1ME LINE L1 4475 4715 -1431 22 0 0 0 chr10 100014634 100014656 -40302109 + AT_rich Low_complexity Low_complexity 1 22 0 279 293 20 0 chr10 100014897 100014996 -40301769 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 368 225 11 22 chr10 100015147 100015236 -40301529 + MLT1L LTR MaLR 170 257 -358 520 271 73 10 chr10 100015355 100015547 -40301218 + MLT1L LTR MaLR 410 613 -2 1278 200 69 14 chr10 100015655 100015930 -40300835 + AluJo SINE Alu 2 291 -21 667 275 49 20 chr10 100016110 100016415 -40300350 + L1ME LINE L1 5485 5798 -323 844 153 0 0 chr10 100016476 100016600 -40300165 + FLAM_A SINE Alu 1 124 -9 1637 180 39 7 chr10 100017704 100017988 -40298777 + AluJb SINE Alu 1 293 -19 2216 114 3 0 chr10 100018037 100018334 -40298431 + AluSx SINE Alu 1 298 -14 23 33 0 0 chr10 100018722 100018752 -40298013 + AT_rich Low_complexity Low_complexity 1 30 0 7443 20 0 0 chr10 100019487 100021026 -40295739 - L1HS LINE L1 -2 6153 4615 1237 97 0 40 chr10 100021388 100021563 -40295202 - AluSc SINE Alu -10 299 132 1237 131 6 0 chr10 100021668 100021844 -40294921 + AluSg/x SINE Alu 122 298 -14 288 0 0 0 chr10 100021844 100021876 -40294889 + (TA)n Simple_repeat Simple_repeat 2 33 0 311 235 265 0 chr10 100022519 100022621 -40294144 + L3 LINE CR1 517 645 -932 501 327 149 21 chr10 100022645 100022876 -40293889 + L3 LINE CR1 1130 1405 -172 2350 105 3 0 chr10 100022876 100023181 -40293584 + AluSq SINE Alu 2 307 -6 501 327 149 21 chr10 100023181 100023230 -40293535 + L3 LINE CR1 1405 1446 -131 989 208 108 41 chr10 100023737 100024079 -40292686 - MLT1A1 LTR MaLR 0 365 1 202 289 62 70 chr10 100024863 100024991 -40291774 - L2 LINE L2 -40 3273 3147 253 292 38 38 chr10 100025066 100025302 -40291463 + L1ME LINE L1 535 770 -5300 24 0 0 0 chr10 100026082 100026106 -40290659 + AT_rich Low_complexity Low_complexity 1 24 0 226 277 9 18 chr10 100026458 100026570 -40290195 + L1ME LINE L1 892 1002 -5081 4361 163 53 19 chr10 100026631 100028046 -40288719 - L1MB1 LINE L1 -2 6166 4710 352 322 116 0 chr10 100028237 100028470 -40288295 + L1 LINE L1 4334 4593 -1553 271 303 73 18 chr10 100028536 100028754 -40288011 + L1 LINE L1 4733 4962 -1184 927 154 0 7 chr10 100028778 100028914 -40287851 + AluJo SINE Alu 1 135 -177 1690 185 3 22 chr10 100028914 100029227 -40287538 + AluJo SINE Alu 1 307 -5 2054 123 41 0 chr10 100029308 100029600 -40287165 + AluSx SINE Alu 1 304 -8 24 32 0 0 chr10 100029609 100029640 -40287125 + AT_rich Low_complexity Low_complexity 1 31 0 347 111 111 25 chr10 100029740 100029821 -40286944 + L1ME4a LINE L1 5313 5400 -2408 731 248 74 15 chr10 100029827 100030097 -40286668 + L1ME4a LINE L1 5477 5762 -2046 22 0 0 0 chr10 100030232 100030254 -40286511 + AT_rich Low_complexity Low_complexity 1 22 0 2138 110 10 7 chr10 100030298 100030598 -40286167 + AluSx SINE Alu 1 301 -11 1937 143 3 33 chr10 100030636 100030943 -40285822 + AluSx SINE Alu 1 298 -14 239 307 41 0 chr10 100031206 100031419 -40285346 - L1MC/D LINE L1 -710 5444 5297 321 50 0 117 chr10 100031557 100031617 -40285148 - Alu SINE Alu -4 298 246 2120 104 28 0 chr10 100031754 100032041 -40284724 + AluSg SINE Alu 1 295 -15 2426 85 0 0 chr10 100032219 100032525 -40284240 + AluY SINE Alu 1 306 -5 216 43 43 43 chr10 100032549 100032596 -40284169 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 182 232 32 126 chr10 100032736 100032831 -40283934 + MER5B DNA MER1_type 69 154 -24 * 294 354 9 26 chr10 100032749 100032862 -40283903 - MER5A DNA MER1_type -75 114 4 200 268 84 42 chr10 100033202 100033273 -40283492 - L2 LINE L2 -5 3267 3194 341 239 58 14 chr10 100033823 100033961 -40282804 + L1ME4a LINE L1 5974 6117 -4 852 207 81 77 chr10 100034414 100034737 -40282028 - L1ME1 LINE L1 -5 6161 5838 193 254 15 60 chr10 100034882 100034949 -40281816 - L2 LINE L2 -1 3312 3249 372 205 36 0 chr10 100035232 100035315 -40281450 - MLT1L LTR MaLR -332 283 198 330 285 89 34 chr10 100036997 100037176 -40279589 - MER5A DNA MER1_type 0 189 1 670 228 148 84 chr10 100037459 100037644 -40279121 + MLT1L LTR MaLR 19 191 -424 1416 185 84 35 chr10 100037644 100037931 -40278834 + AluJo SINE Alu 1 301 -11 670 228 148 84 chr10 100037931 100038306 -40278459 + MLT1L LTR MaLR 191 615 0 189 196 0 0 chr10 100038419 100038465 -40278300 + (CA)n Simple_repeat Simple_repeat 2 47 0 608 275 21 21 chr10 100039179 100039412 -40277353 + LTR16A LTR ERVL 218 450 0 231 195 0 0 chr10 100039878 100039919 -40276846 + (CATA)n Simple_repeat Simple_repeat 2 42 0 256 283 145 33 chr10 100040056 100040208 -40276557 + L2 LINE L2 2562 2730 -584 * 329 342 96 10 chr10 100040198 100040397 -40276368 + L2 LINE L2 2838 3053 -219 195 290 166 47 chr10 100040523 100040692 -40276073 + L2 LINE L2 3120 3308 -5 2264 115 0 0 chr10 100041431 100041727 -40275038 + AluSx SINE Alu 1 296 -16 213 340 0 0 chr10 100041893 100041943 -40274822 + L2 LINE L2 3246 3295 -18 575 303 100 64 chr10 100041949 100042747 -40274018 - L2 LINE L2 -1199 2115 1289 1977 124 7 0 chr10 100043104 100043409 -40273356 + AluSx SINE Alu 1 307 0 1556 149 37 123 chr10 100043447 100043822 -40272943 + MER7A DNA MER2_type 4 344 -2 354 279 155 0 chr10 100044609 100044738 -40272027 + MIR SINE MIR 114 262 0 338 344 118 18 chr10 100044846 100045175 -40271590 - L2 LINE L2 -2357 957 596 1658 175 14 7 chr10 100045573 100045853 -40270912 - AluJo SINE Alu -30 282 1 1862 129 54 7 chr10 100046079 100046374 -40270391 + AluSq SINE Alu 1 309 -4 1428 152 176 0 chr10 100048342 100048638 -40268127 + MER7A DNA MER2_type 1 346 0 1770 165 14 3 chr10 100048708 100049005 -40267760 + AluJb SINE Alu 1 300 -12 378 316 10 0 chr10 100049020 100049118 -40267647 - L2 LINE L2 -5 3267 3169 22 0 0 0 chr10 100049136 100049158 -40267607 + AT_rich Low_complexity Low_complexity 1 22 0 394 195 168 18 chr10 100049278 100049391 -40267374 + HsTC2 DNA Tc2 8 137 -1761 249 243 29 14 chr10 100049399 100049469 -40267296 + HsTC2 DNA Tc2 1286 1356 -542 830 113 0 57 chr10 100049475 100049616 -40267149 - FLAM_C SINE Alu 0 133 1 328 293 85 19 chr10 100049655 100049761 -40267004 - MIR3 SINE MIR -51 157 45 474 297 45 7 chr10 100049870 100050025 -40266740 + MIR SINE MIR 99 259 -3 695 169 40 0 chr10 100051809 100051933 -40264832 - FLAM_A SINE Alu -4 129 1 37 23 0 0 chr10 100052426 100052470 -40264295 + AT_rich Low_complexity Low_complexity 1 44 0 29 28 0 0 chr10 100053445 100053481 -40263284 + AT_rich Low_complexity Low_complexity 1 36 0 186 43 0 0 chr10 100053691 100053714 -40263051 + (TG)n Simple_repeat Simple_repeat 2 24 0 441 214 34 0 chr10 100054030 100054147 -40262618 + L1MC2 LINE L1 5159 5279 -867 2282 82 0 3 chr10 100054168 100054459 -40262306 + AluY SINE Alu 1 290 -21 234 0 0 0 chr10 100054472 100054498 -40262267 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 100055066 100055086 -40261679 + (A)n Simple_repeat Simple_repeat 1 20 0 892 183 19 10 chr10 100055428 100055634 -40261131 + L1MC2 LINE L1 5717 5929 -240 1388 163 28 52 chr10 100055634 100055733 -40261032 + MLT2D LTR ERVL 1 101 -313 1731 98 132 0 chr10 100055733 100055998 -40260767 - AluSx SINE Alu -2 300 1 1388 163 28 52 chr10 100055998 100056223 -40260542 + MLT2D LTR ERVL 101 317 -97 268 319 62 10 chr10 100057827 100058115 -40258650 + L1M4 LINE L1 2111 2413 -3733 2344 59 21 0 chr10 100058224 100058514 -40258251 + AluY SINE Alu 1 296 -15 2219 113 0 3 chr10 100058829 100059121 -40257644 + AluSg SINE Alu 1 291 -19 776 256 101 9 chr10 100059460 100059687 -40257078 - MIR SINE MIR -1 261 14 274 275 165 9 chr10 100060663 100060772 -40255993 + L2 LINE L2 3147 3272 0 186 328 42 34 chr10 100061001 100061120 -40255645 + MIR SINE MIR 73 192 -70 704 272 52 67 chr10 100061886 100062327 -40254438 - L2 LINE L2 0 3313 2826 26 64 0 0 chr10 100063108 100063155 -40253610 + AT_rich Low_complexity Low_complexity 1 47 0 1540 151 37 60 chr10 100065264 100065562 -40251203 - AluJo SINE Alu -21 291 1 579 167 9 0 chr10 100066593 100066707 -40250058 - L1MB8 LINE L1 0 6178 6064 691 82 82 0 chr10 100066707 100066815 -40249950 + L1MB4 LINE L1 6056 6174 -6 398 108 15 0 chr10 100067055 100067120 -40249645 + (GGGA)n Simple_repeat Simple_repeat 3 68 0 248 0 0 30 chr10 100067299 100067332 -40249433 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2258 87 0 26 chr10 100068003 100068313 -40248452 + AluSc SINE Alu 1 302 -7 22 35 0 0 chr10 100068802 100068831 -40247934 + AT_rich Low_complexity Low_complexity 1 29 0 279 337 35 0 chr10 100069278 100069364 -40247401 - L2 LINE L2 -16 3256 3168 2092 132 3 0 chr10 100069652 100069963 -40246802 - AluSx SINE Alu 0 312 1 24 0 0 0 chr10 100070451 100070475 -40246290 + AT_rich Low_complexity Low_complexity 1 24 0 803 186 6 11 chr10 100071417 100071594 -40245171 - L1 LINE L1 -1477 4669 4494 1892 255 100 28 chr10 100071609 100071965 -40244800 + L1ME3 LINE L1 4839 5168 -994 2778 115 16 48 chr10 100071965 100072407 -40244358 + MSTA LTR MaLR 1 428 0 1892 255 100 28 chr10 100072407 100073116 -40243649 + L1ME3 LINE L1 5168 5986 -176 448 225 9 0 chr10 100073158 100073269 -40243496 - L1ME4a LINE L1 -216 5905 5794 189 159 0 0 chr10 100073871 100073915 -40242850 + CT-rich Low_complexity Low_complexity 2 45 0 892 269 109 16 chr10 100075509 100075884 -40240881 - LTR16B LTR ERVL -16 448 39 361 176 40 14 chr10 100076406 100076480 -40240285 - MER81 DNA DNA 0 114 39 1213 192 22 111 chr10 100076686 100077092 -40239673 - MLT1A2 LTR MaLR 0 374 5 749 279 52 47 chr10 100077777 100078186 -40238579 - MLT1J LTR MaLR -6 505 47 415 226 128 0 chr10 100078186 100078288 -40238477 + MER58A DNA MER1_type 1 115 0 2862 171 59 5 chr10 100078305 100078902 -40237863 - L1MB7 LINE L1 -16 6168 5540 24 0 0 0 chr10 100078937 100078961 -40237804 + AT_rich Low_complexity Low_complexity 1 24 0 289 237 1 98 chr10 100079041 100079082 -40237683 + MLT1K LTR MaLR 500 543 -45 2356 96 3 0 chr10 100079082 100079383 -40237382 - AluSx SINE Alu -10 302 1 289 237 1 98 chr10 100079383 100079459 -40237306 + MLT1K LTR MaLR 543 588 0 833 310 72 21 chr10 100079562 100079936 -40236829 + MLT1J2 LTR MaLR 1 393 -57 1014 192 10 0 chr10 100080733 100080926 -40235839 + LTR41 LTR ERVL 1 195 -578 918 246 84 16 chr10 100081421 100081847 -40234918 - L1M4 LINE L1 -1592 4554 4100 1622 81 0 24 chr10 100081856 100082065 -40234700 + AluSg SINE Alu 2 205 -105 1746 189 26 7 chr10 100082072 100082378 -40234387 - AluJo SINE Alu 0 312 1 267 274 0 24 chr10 100083020 100083104 -40233661 - L1ME4a LINE L1 -2016 5792 5711 185 281 35 0 chr10 100083129 100083186 -40233579 - L2 LINE L2 -1 3312 3254 203 231 75 88 chr10 100083217 100083364 -40233401 - L2 LINE L2 -124 3189 3045 1308 174 19 80 chr10 100083367 100083678 -40233087 + AluJo SINE Alu 9 300 -12 805 54 0 36 chr10 100083678 100083789 -40232976 + AluY SINE Alu 205 311 0 255 328 145 0 chr10 100083824 100083955 -40232810 - L2 LINE L2 -281 3032 2883 612 241 46 11 chr10 100083955 100084129 -40232636 - LTR67 LTR ERVL 0 557 378 847 266 26 4 chr10 100084139 100084365 -40232400 - LTR67 LTR ERVL 0 557 327 1682 166 4 4 chr10 100084571 100084836 -40231929 - AluJo SINE Alu -23 289 25 273 343 39 15 chr10 100084871 100085008 -40231757 + MIR3 SINE MIR 15 157 -51 299 257 53 9 chr10 100085019 100085132 -40231633 + MLT1J LTR MaLR 8 125 -386 1121 249 59 14 chr10 100085139 100085497 -40231268 + HsTC2 DNA Tc2 1278 1827 -71 1204 125 11 0 chr10 100085525 100085701 -40231064 + L1PA16 LINE L1 5771 5948 -218 977 141 37 0 chr10 100085840 100086003 -40230762 + L1PA16 LINE L1 5952 6120 -46 1302 174 0 42 chr10 100086003 100086244 -40230521 + AluJo SINE Alu 52 282 -30 1406 299 123 52 chr10 100086249 100087033 -40229732 + L1M4 LINE L1 2758 3671 -2475 2145 130 0 19 chr10 100087033 100087348 -40229417 + AluSx SINE Alu 1 309 -3 1406 299 123 52 chr10 100087348 100087852 -40228913 + L1M4 LINE L1 3671 4138 -2008 1699 137 4 4 chr10 100087893 100088149 -40228616 - AluSx SINE Alu -56 256 1 3195 185 22 35 chr10 100088149 100089497 -40227268 - L1MC3 LINE L1 -760 5369 4545 10764 162 13 32 chr10 100089508 100090564 -40226201 - L1P LINE L1 -1201 4945 3949 4171 114 9 3 chr10 100090564 100091195 -40225570 - MER41B LTR ERV1 0 635 1 10764 162 13 32 chr10 100091195 100092266 -40224499 - L1P LINE L1 -2197 3949 2859 204 179 0 0 chr10 100092266 100092305 -40224460 + T-rich Low_complexity Low_complexity 1 39 0 305 262 0 0 chr10 100092479 100092582 -40224183 - L1P LINE L1 -3273 2873 2771 * 2343 231 23 8 chr10 100092581 100093184 -40223581 - L1MC3 LINE L1 -1763 4366 3755 424 316 65 13 chr10 100093169 100093479 -40223286 - L1MC3 LINE L1 -4898 1221 896 * 274 229 112 67 chr10 100094033 100094256 -40222509 + L1MCc LINE L1 1263 1495 -4928 1028 290 81 36 chr10 100094280 100095097 -40221668 + L1M3de LINE L1 1010 1809 -4587 288 269 194 16 chr10 100095132 100095374 -40221391 + L1MCc LINE L1 2609 2893 -4229 320 206 29 98 chr10 100095390 100095601 -40221164 + L1MEc LINE L1 1130 1483 -4943 1906 245 15 2 chr10 100095609 100096021 -40220744 + MLT1F LTR MaLR 2 418 -124 820 29 29 10 chr10 100096022 100096125 -40220640 + U6 snRNA snRNA 3 107 0 546 204 21 35 chr10 100096389 100096531 -40220234 + MLT1F LTR MaLR 403 542 0 550 280 65 45 chr10 100096534 100097003 -40219762 + MLT1F-int LTR MaLR 3 599 -772 468 286 80 125 chr10 100097206 100097908 -40218857 + MLT1F-int LTR MaLR 701 1370 -1 1803 248 108 7 chr10 100097909 100098345 -40218420 + MLT1F LTR MaLR 1 480 -62 732 168 40 0 chr10 100098346 100098471 -40218294 - FLAM_A SINE Alu -12 130 1 310 149 14 40 chr10 100098473 100098547 -40218218 + MLT1F LTR MaLR 494 565 -2 501 260 94 61 chr10 100098616 100099435 -40217330 + L1MEc LINE L1 1571 2482 -4125 2108 238 60 59 chr10 100099476 100100585 -40216180 + L1MEc LINE L1 2497 3606 -2820 22 0 0 0 chr10 100100707 100100729 -40216036 + AT_rich Low_complexity Low_complexity 1 22 0 2838 3 0 0 chr10 100100993 100101299 -40215466 + AluYa5 SINE Alu 1 306 -5 302 336 43 5 chr10 100101619 100101830 -40214935 - L1MEc LINE L1 -3526 2689 2471 1458 147 77 5 chr10 100101913 100102190 -40214575 + LTR45B LTR ERV1 3 338 -151 288 109 4 10 chr10 100102190 100102453 -40214312 + AluJo SINE Alu 1 325 0 395 236 56 62 chr10 100102453 100102614 -40214151 + LTR45B LTR ERV1 329 488 -1 330 275 120 59 chr10 100102617 100102953 -40213812 - L1MEc LINE L1 -3822 2393 2077 2112 112 14 0 chr10 100103023 100103319 -40213446 - AluSx SINE Alu 0 312 13 515 352 68 33 chr10 100103513 100103911 -40212854 - HAL1 LINE L1 -744 1763 1352 1750 94 91 3 chr10 100103972 100104259 -40212506 - L1MA2 LINE L1 0 6304 5993 373 301 75 24 chr10 100104269 100104561 -40212204 - L1MEc LINE L1 -4906 1299 993 231 36 0 0 chr10 100104807 100104835 -40211930 + (TTCC)n Simple_repeat Simple_repeat 4 31 0 262 200 0 22 chr10 100104836 100104870 -40211895 + CT-rich Low_complexity Low_complexity 1 34 -54 2347 84 0 7 chr10 100104870 100105178 -40211587 - AluSg1 SINE Alu -1 308 3 262 200 0 22 chr10 100105178 100105233 -40211532 + CT-rich Low_complexity Low_complexity 34 88 0 1197 262 164 19 chr10 100105381 100105916 -40210849 - HAL1 LINE L1 -677 1830 1218 750 199 12 18 chr10 100105895 100106065 -40210700 - L1ME LINE L1 -360 5761 5600 * 4543 127 8 36 chr10 100106062 100106750 -40210015 - L1M4 LINE L1 -3834 2548 1842 2217 102 3 0 chr10 100106750 100107044 -40209721 + AluSg SINE Alu 2 296 -14 4543 127 8 36 chr10 100107044 100107065 -40209700 - L1M4 LINE L1 -4540 1842 1822 1891 148 7 7 chr10 100107065 100107368 -40209397 + AluJb SINE Alu 1 303 -9 4543 127 8 36 chr10 100107368 100107519 -40209246 - L1M4 LINE L1 -4560 1822 1711 3825 166 70 38 chr10 100107505 100108367 -40208398 - L1M4 LINE L1 -5493 891 3 * 27 0 0 0 chr10 100108446 100108473 -40208292 + AT_rich Low_complexity Low_complexity 1 27 0 1199 165 84 48 chr10 100108838 100109231 -40207534 - L1MC5 LINE L1 -214 7747 7341 398 273 31 43 chr10 100109651 100109812 -40206953 - HAL1 LINE L1 -1007 1500 1342 247 208 38 19 chr10 100110582 100110635 -40206130 + L2 LINE L2 3215 3268 -4 376 183 0 0 chr10 100111156 100111216 -40205549 - FLAM_A SINE Alu -72 60 1 200 262 0 0 chr10 100111268 100111310 -40205455 + (CACCAT)n Simple_repeat Simple_repeat 4 45 0 21 0 0 0 chr10 100111812 100111833 -40204932 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr10 100112441 100112472 -40204293 + AT_rich Low_complexity Low_complexity 1 31 0 203 179 0 0 chr10 100115741 100115780 -40200985 + T-rich Low_complexity Low_complexity 1 39 0 1038 149 108 50 chr10 100116032 100116254 -40200511 + MER46A DNA MER2_type 2 236 0 1136 150 73 64 chr10 100117301 100117495 -40199270 + MER46A DNA MER2_type 2 201 -2530 2068 115 0 10 chr10 100117495 100117807 -40198958 - AluSx SINE Alu 0 309 1 1136 150 73 64 chr10 100117807 100117844 -40198921 + MER46A DNA MER2_type 201 236 0 262 313 280 12 chr10 100118226 100118469 -40198296 + MLT1K LTR MaLR 56 363 -225 180 245 38 19 chr10 100118820 100118873 -40197892 - L2 LINE L2 -1 3271 3218 754 127 0 25 chr10 100119823 100119941 -40196824 + FLAM_C SINE Alu 13 127 -16 1236 153 66 0 chr10 100120153 100120349 -40196416 - MER58A DNA MER1_type -4 220 12 3506 295 115 17 chr10 100120351 100122008 -40194757 + L2 LINE L2 1432 3262 -51 1163 306 34 52 chr10 100122017 100122550 -40194215 - L2 LINE L2 -28 3285 2744 1821 136 96 38 chr10 100122550 100122895 -40193870 + MLT1A1 LTR MaLR 1 365 0 1163 306 34 52 chr10 100122895 100123125 -40193640 - L2 LINE L2 -569 2744 2540 2228 111 3 0 chr10 100123125 100123431 -40193334 - AluSp SINE Alu -6 307 1 1163 306 34 52 chr10 100123431 100123572 -40193193 - L2 LINE L2 -773 2540 2398 1681 171 0 46 chr10 100123922 100124226 -40192539 + AluJb SINE Alu 2 291 -21 22 0 0 0 chr10 100124841 100124863 -40191902 + AT_rich Low_complexity Low_complexity 1 22 0 1668 179 26 13 chr10 100125007 100125315 -40191450 - AluJb SINE Alu 0 312 1 450 0 0 0 chr10 100125579 100125629 -40191136 + (TG)n Simple_repeat Simple_repeat 2 51 0 2170 111 0 7 chr10 100126075 100126381 -40190384 - AluSx SINE Alu -8 304 1 1962 158 3 0 chr10 100127262 100127559 -40189206 - AluJb SINE Alu -14 298 1 24 0 0 0 chr10 100127569 100127593 -40189172 + AT_rich Low_complexity Low_complexity 1 24 0 329 279 67 94 chr10 100127805 100128102 -40188663 + L1M4 LINE L1 3409 3697 -2449 2286 86 0 0 chr10 100128338 100128641 -40188124 - AluSx SINE Alu 0 305 3 410 297 128 28 chr10 100129378 100129818 -40186947 - L1MC/D LINE L1 -449 5672 5381 2032 245 124 44 chr10 100130635 100131431 -40185334 - HAL1 LINE L1 -672 1835 938 2362 75 3 3 chr10 100131431 100131725 -40185040 + AluSp SINE Alu 1 294 -19 2032 245 124 44 chr10 100131725 100131949 -40184816 - HAL1 LINE L1 -1569 938 733 1029 200 141 24 chr10 100131968 100131999 -40184766 - MER5C DNA MER1_type 0 324 298 2451 59 0 0 chr10 100131999 100132288 -40184477 - AluY SINE Alu -22 289 1 1029 200 141 24 chr10 100132288 100132546 -40184219 - MER5C DNA MER1_type -26 298 1 953 273 166 14 chr10 100132582 100133010 -40183755 - HAL1 LINE L1 -1912 595 103 294 312 92 12 chr10 100133128 100133301 -40183464 - HAL1 LINE L1 -823 1684 1498 2360 77 0 32 chr10 100133316 100133626 -40183139 + AluY SINE Alu 1 300 -11 2221 113 0 19 chr10 100134008 100134326 -40182439 - AluSx SINE Alu 0 312 1 1805 166 7 3 chr10 100135303 100135592 -40181173 + AluJb SINE Alu 1 290 -22 2831 165 24 80 chr10 100135783 100135833 -40180932 - MLT2B3 LTR ERVL 0 554 503 1777 179 52 0 chr10 100135833 100136163 -40180602 - MER7A DNA MER2_type 0 346 2 2831 165 24 80 chr10 100136163 100136699 -40180066 - MLT2B3 LTR ERVL -51 503 1 1314 122 0 24 chr10 100137406 100137611 -40179154 + AluJb SINE Alu 85 284 -28 439 199 20 20 chr10 100137614 100137760 -40179005 + CT-rich Low_complexity Low_complexity 3 148 0 622 169 28 70 chr10 100138515 100138657 -40178108 - MIR SINE MIR -56 206 71 521 193 123 18 chr10 100139189 100139303 -40177462 - MIR SINE MIR -67 141 16 914 231 74 5 chr10 100146873 100147076 -40169689 - MER58A DNA MER1_type -2 222 6 1727 151 61 0 chr10 100148400 100148679 -40168086 - AluSx SINE Alu -16 296 1 218 196 0 0 chr10 100148727 100148778 -40167987 + A-rich Low_complexity Low_complexity 2 52 0 2533 194 37 62 chr10 100149068 100149630 -40167135 - MLT2B3 LTR ERVL -6 548 1 1216 182 112 85 chr10 100149630 100149760 -40167005 + L1M4b LINE L1 980 1105 -5750 2144 99 7 0 chr10 100149760 100150052 -40166713 + AluY SINE Alu 1 294 -17 1216 182 112 85 chr10 100150052 100150451 -40166314 + L1M4b LINE L1 1105 1531 -5324 1947 114 32 0 chr10 100150451 100150732 -40166033 + AluSx SINE Alu 1 290 -22 1216 182 112 85 chr10 100150732 100150994 -40165771 + L1M4b LINE L1 1531 1785 -5070 450 197 78 14 chr10 100150999 100151141 -40165624 + L1MB8 LINE L1 4965 5115 -1031 230 264 88 16 chr10 100151222 100151347 -40165418 - L1M4c LINE L1 -4245 2401 2268 5666 211 65 69 chr10 100151690 100152319 -40164446 - L1M4c LINE L1 -4565 2081 1451 1244 205 105 12 chr10 100152319 100152577 -40164188 - AluJo SINE Alu -30 282 1 5666 211 65 69 chr10 100152577 100153992 -40162773 - L1M4c LINE L1 -5195 1451 2 3514 182 87 9 chr10 100153998 100154948 -40161817 + L1MB8 LINE L1 5134 6156 -22 981 258 179 6 chr10 100154974 100155492 -40161273 + L1M4b LINE L1 1806 2423 -4536 879 272 86 24 chr10 100155615 100156175 -40160590 + L1M4b LINE L1 2471 3029 -3928 1632 193 61 6 chr10 100156178 100156504 -40160261 - MER2 DNA MER2_type 0 344 1 254 182 0 0 chr10 100156504 100156548 -40160217 - MER63 DNA MER1_type -344 718 675 232 290 0 0 chr10 100156638 100156707 -40160058 + L1M4b LINE L1 3037 3105 -3852 413 169 0 0 chr10 100156709 100156780 -40159985 - MLT1A2 LTR MaLR 0 374 304 3119 221 59 74 chr10 100156781 100158012 -40158753 + L1M4b LINE L1 3177 4424 -2533 234 0 0 0 chr10 100158012 100158038 -40158727 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 3119 221 59 74 chr10 100158038 100158072 -40158693 + L1M4b LINE L1 4424 4425 -2532 1413 226 61 36 chr10 100158072 100158435 -40158330 + MLT1A2 LTR MaLR 1 372 -2 3119 221 59 74 chr10 100158435 100158469 -40158296 + L1M4b LINE L1 4425 4458 -2499 441 321 29 0 chr10 100158574 100158711 -40158054 - HERV16 LTR ERVL -4855 141 1 455 347 24 37 chr10 100158713 100159007 -40157758 - LTR16B LTR ERVL -2 462 173 267 268 22 116 chr10 100159051 100159130 -40157635 - LTR16A LTR ERVL -325 125 40 699 90 0 0 chr10 100159130 100159230 -40157535 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 1323 172 101 19 chr10 100159233 100159500 -40157265 - AluJo SINE Alu -23 289 1 267 268 22 116 chr10 100159500 100159554 -40157211 - LTR16A LTR ERVL -412 38 1 2060 240 172 23 chr10 100159554 100159766 -40156999 + L1ME LINE L1 1210 1389 -5007 1635 153 10 47 chr10 100159766 100159892 -40156873 + AluJb SINE Alu 13 142 -170 2186 115 7 3 chr10 100159892 100160197 -40156568 + AluSx SINE Alu 5 310 -2 1635 153 10 47 chr10 100160197 100160370 -40156395 + AluJb SINE Alu 142 301 -11 2060 240 172 23 chr10 100160370 100161127 -40155638 + L1ME LINE L1 1389 2324 -4072 4392 256 69 6 chr10 100161130 100162493 -40154272 + L1ME LINE L1 2436 3884 -2331 1436 201 105 37 chr10 100162503 100162942 -40153823 + L1ME LINE L1 5290 5752 -483 206 255 39 0 chr10 100162948 100162999 -40153766 + L2 LINE L2 3219 3271 -1 1997 148 3 3 chr10 100163026 100163451 -40153314 - AluSx SINE Alu 0 425 1 813 187 8 15 chr10 100163462 100163596 -40153169 - FLAM_C SINE Alu 0 133 1 34789 65 13 7 chr10 100163618 100169037 -40147728 - L1PA5 LINE L1 -1 6153 706 3498 156 36 2 chr10 100169038 100169621 -40147144 - L1PA5 LINE L1 -5533 613 11 2242 101 7 0 chr10 100169681 100169968 -40146797 - AluSc SINE Alu -20 289 1 360 311 89 0 chr10 100169968 100170103 -40146662 - MIR SINE MIR -101 161 15 1923 157 0 13 chr10 100171117 100171422 -40145343 - AluSx SINE Alu -11 301 1 1010 204 83 9 chr10 100172051 100172281 -40144484 - MLT1B LTR MaLR -2 465 219 387 56 0 0 chr10 100172960 100173014 -40143751 + (CAT)n Simple_repeat Simple_repeat 3 56 0 1032 179 30 51 chr10 100173588 100173822 -40142943 - MLT1B LTR MaLR -161 229 1 2812 88 11 35 chr10 100174213 100174586 -40142179 + THE1B LTR MaLR 1 364 0 28 0 0 0 chr10 100174971 100174999 -40141766 + AT_rich Low_complexity Low_complexity 1 28 0 5080 142 41 32 chr10 100177659 100178041 -40138724 + L1MB2 LINE L1 5028 5405 -766 2680 23 3 0 chr10 100178041 100178341 -40138424 - AluY SINE Alu -10 301 1 5080 142 41 32 chr10 100178341 100179089 -40137676 + L1MB2 LINE L1 5405 6164 -7 300 325 150 8 chr10 100179178 100179298 -40137467 - L2 LINE L2 0 3272 3136 21 36 0 0 chr10 100180339 100180367 -40136398 + AT_rich Low_complexity Low_complexity 1 28 0 965 163 13 0 chr10 100180591 100180744 -40136021 - FRAM SINE Alu -24 152 1 1291 101 0 16 chr10 100181030 100181218 -40135547 + AluY SINE Alu 127 311 0 40 37 0 0 chr10 100181248 100181302 -40135463 + AT_rich Low_complexity Low_complexity 1 54 0 343 272 102 97 chr10 100181534 100181995 -40134770 + HAL1b LINE L1 116 583 -765 2001 127 0 0 chr10 100181995 100182271 -40134494 - AluSq SINE Alu -37 276 1 343 272 102 97 chr10 100182271 100182538 -40134227 + HAL1b LINE L1 583 847 -501 180 0 0 0 chr10 100182630 100182650 -40134115 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1914 84 0 30 chr10 100183010 100183272 -40133493 + AluSx SINE Alu 1 254 -58 207 0 0 0 chr10 100183298 100183321 -40133444 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 187 191 0 127 chr10 100184367 100184430 -40132335 - L2 LINE L2 -17 3296 3242 1999 152 49 25 chr10 100184453 100184935 -40131830 + Charlie1 DNA MER1_type 1 2761 0 297 0 0 0 chr10 100185011 100185044 -40131721 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 1571 232 197 25 chr10 100185066 100185810 -40130955 - L2 LINE L2 -56 3257 2384 189 244 133 22 chr10 100186095 100186185 -40130580 - MIR SINE MIR -31 231 132 915 248 22 50 chr10 100186187 100186465 -40130300 + L2 LINE L2 3042 3311 -2 23 92 0 0 chr10 100186559 100186624 -40130141 + AT_rich Low_complexity Low_complexity 1 65 0 425 266 127 6 chr10 100187138 100187296 -40129469 - MIR SINE MIR -73 189 13 858 150 0 14 chr10 100189709 100189849 -40126916 + FRAM SINE Alu 35 172 -4 23 0 0 0 chr10 100190390 100190413 -40126352 + AT_rich Low_complexity Low_complexity 1 23 0 229 287 46 37 chr10 100191408 100191516 -40125249 + MIR SINE MIR 38 146 -62 183 231 0 0 chr10 100192015 100192054 -40124711 - L2 LINE L2 -21 3251 3213 376 161 16 0 chr10 100192084 100192146 -40124619 - MIR SINE MIR -65 143 81 2030 112 18 0 chr10 100192644 100192965 -40123800 - AluSx SINE Alu 0 326 1 1857 150 27 10 chr10 100194136 100194436 -40122329 - AluJo SINE Alu -7 305 1 299 214 83 12 chr10 100194603 100194687 -40122078 - L2 LINE L2 -44 3228 3139 397 268 150 29 chr10 100195622 100195859 -40120906 - MIR SINE MIR 0 262 9 277 239 45 23 chr10 100196703 100196791 -40119974 - L2 LINE L2 -188 3084 2995 204 97 0 0 chr10 100197396 100197427 -40119338 + (TG)n Simple_repeat Simple_repeat 1 31 0 522 252 93 31 chr10 100198057 100198283 -40118482 - MIR SINE MIR -21 241 2 195 42 0 0 chr10 100198684 100198708 -40118057 + (TA)n Simple_repeat Simple_repeat 1 24 0 4939 169 34 10 chr10 100200078 100201390 -40115375 - L1MB8 LINE L1 0 6178 4839 784 257 8 79 chr10 100201516 100201685 -40115080 - MIR SINE MIR -34 228 79 1670 166 53 11 chr10 100201685 100201969 -40114796 + AluJb SINE Alu 5 300 -12 784 257 8 79 chr10 100201969 100202040 -40114725 - MIR SINE MIR -183 79 5 3344 164 16 58 chr10 100202979 100203618 -40113147 + LTR9 LTR ERV1 1 612 0 724 188 38 0 chr10 100204367 100204500 -40112265 + MIR SINE MIR 81 218 -44 302 216 27 14 chr10 100205243 100205317 -40111448 - Charlie8 DNA MER1_type -2215 202 128 288 316 30 2 chr10 100205348 100205518 -40111247 - MIR SINE MIR -8 254 47 3586 131 49 9 chr10 100206111 100206763 -40110002 + MER50 LTR ERV1 1 711 -23 338 328 17 0 chr10 100207603 100207722 -40109043 + MER5B DNA MER1_type 44 164 -14 435 228 39 111 chr10 100207841 100207959 -40108806 + MIR SINE MIR 20 122 -140 2238 119 0 13 chr10 100207959 100208270 -40108495 - AluSx SINE Alu -5 307 1 435 228 39 111 chr10 100208270 100208331 -40108434 + MIR SINE MIR 122 186 -76 2345 93 0 7 chr10 100208915 100209217 -40107548 - AluSq SINE Alu -13 300 1 240 252 113 26 chr10 100209329 100209444 -40107321 + MIR3 SINE MIR 4 128 -80 294 362 9 0 chr10 100209483 100209588 -40107177 + L2 LINE L2 3148 3253 -19 1990 118 18 0 chr10 100209831 100210135 -40106630 + AluSx SINE Alu 1 309 0 275 0 29 0 chr10 100210408 100210443 -40106322 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 274 331 50 0 chr10 100210933 100211054 -40105711 - MIR SINE MIR -133 129 3 1273 134 0 0 chr10 100211360 100211539 -40105226 - AluSg/x SINE Alu 0 312 134 2175 121 3 0 chr10 100211539 100211829 -40104936 - AluSx SINE Alu -21 291 1 2354 107 25 41 chr10 100212220 100212613 -40104152 - L1MA3 LINE L1 -10 6295 5909 324 48 0 0 chr10 100212927 100212969 -40103796 + (TG)n Simple_repeat Simple_repeat 1 42 0 318 214 193 28 chr10 100213182 100213327 -40103438 + MIR3 SINE MIR 24 192 -16 471 281 73 22 chr10 100214424 100214602 -40102163 + MIR3 SINE MIR 5 191 -17 467 205 70 31 chr10 100214635 100214703 -40102062 - MIR SINE MIR -25 237 173 1958 154 0 44 chr10 100214703 100215022 -40101743 + AluJo SINE Alu 1 305 -7 467 205 70 31 chr10 100215022 100215131 -40101634 - MIR SINE MIR -89 173 42 1940 155 30 7 chr10 100216074 100216378 -40100387 - AluJb SINE Alu -1 311 1 271 396 14 0 chr10 100216576 100216720 -40100045 + L2 LINE L2 2613 2758 -556 551 294 61 13 chr10 100217197 100217434 -40099331 - MIR SINE MIR -12 250 3 703 269 32 9 chr10 100217747 100217963 -40098802 + MIR SINE MIR 32 252 -10 433 242 17 20 chr10 100218417 100218595 -40098170 + MIR SINE MIR 31 260 -2 349 285 87 23 chr10 100218616 100218788 -40097977 - MIR SINE MIR -77 185 3 1933 151 0 16 chr10 100219811 100220116 -40096649 + AluJb SINE Alu 1 300 -12 382 331 55 0 chr10 100220210 100220337 -40096428 + MIR3 SINE MIR 57 190 -18 494 294 86 7 chr10 100221051 100221275 -40095490 + MIR SINE MIR 16 258 -4 475 235 176 7 chr10 100222173 100222326 -40094439 - MER5A DNA MER1_type 0 189 11 339 244 134 8 chr10 100222574 100222693 -40094072 - MIR3 SINE MIR -15 193 60 248 373 75 0 chr10 100222820 100223032 -40093733 - L2 LINE L2 -666 2648 2421 409 294 90 32 chr10 100223287 100223566 -40093199 + L2 LINE L2 3015 3309 -4 234 259 0 0 chr10 100223572 100223630 -40093135 + L3 LINE CR1 1175 1232 -345 834 149 0 22 chr10 100223697 100223831 -40092934 - FLAM_C SINE Alu -1 132 2 275 298 43 71 chr10 100223957 100224098 -40092667 + L3 LINE CR1 1440 1576 -1 1979 145 37 0 chr10 100224993 100225290 -40091475 - AluJb SINE Alu -2 310 3 2172 130 36 30 chr10 100225314 100225676 -40091089 + THE1B LTR MaLR 1 364 0 280 288 59 59 chr10 100225680 100225798 -40090967 + L2 LINE L2 3137 3254 -18 1874 167 0 7 chr10 100226535 100226834 -40089931 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 100227099 100227120 -40089645 + AT_rich Low_complexity Low_complexity 1 21 0 246 370 9 0 chr10 100228582 100228690 -40088075 + L1MC/D LINE L1 5552 5660 -2148 235 241 0 0 chr10 100228759 100228813 -40087952 - L1ME LINE L1 -526 5595 5542 314 105 0 35 chr10 100229074 100229131 -40087634 + (CATA)n Simple_repeat Simple_repeat 4 58 0 2351 102 3 6 chr10 100229543 100229857 -40086908 + AluSp SINE Alu 1 313 0 21 36 0 0 chr10 100230215 100230243 -40086522 + AT_rich Low_complexity Low_complexity 1 28 0 1899 126 71 32 chr10 100230817 100231351 -40085414 + MER51A LTR ERV1 1 634 0 767 252 89 70 chr10 100231388 100231459 -40085306 + L1MC4a LINE L1 5191 5259 -887 523 154 0 0 chr10 100231459 100231537 -40085228 - MADE1 DNA Mariner 0 80 3 767 252 89 70 chr10 100231537 100232089 -40084676 + L1MC4a LINE L1 5259 5403 -743 510 108 0 0 chr10 100233654 100233737 -40083028 + (GA)n Simple_repeat Simple_repeat 1 83 0 1321 93 5 37 chr10 100234159 100234374 -40082391 - L1MA4 LINE L1 -6 6294 6087 492 200 20 87 chr10 100235226 100235314 -40081451 - MER5A DNA MER1_type -39 150 75 2297 103 7 3 chr10 100235314 100235624 -40081141 - AluSq SINE Alu -2 311 1 492 200 20 87 chr10 100235624 100235685 -40081080 - MER5A DNA MER1_type -114 75 11 24 0 0 0 chr10 100235918 100235942 -40080823 + AT_rich Low_complexity Low_complexity 1 24 0 409 285 22 36 chr10 100236853 100236990 -40079775 + MER5A DNA MER1_type 54 188 -1 2561 60 0 25 chr10 100237007 100237326 -40079439 + AluY SINE Alu 1 311 0 2384 80 0 0 chr10 100237774 100238084 -40078681 - AluSq SINE Alu 0 310 1 576 183 248 0 chr10 100238182 100238319 -40078446 + MER5B DNA MER1_type 8 178 0 601 110 0 0 chr10 100239324 100239406 -40077359 + AluS SINE Alu 2 83 -230 34 65 0 0 chr10 100239631 100239693 -40077072 + AT_rich Low_complexity Low_complexity 1 62 0 2301 110 0 0 chr10 100239872 100240173 -40076592 + AluSx SINE Alu 1 301 -11 224 268 89 16 chr10 100240306 100240429 -40076336 - L2 LINE L2 -309 3004 2872 700 177 66 33 chr10 100240779 100240960 -40075805 - MER96B DNA MER1_type? -183 234 48 211 238 0 0 chr10 100241576 100241618 -40075147 - MIR SINE MIR -59 149 108 917 199 73 53 chr10 100242018 100242124 -40074641 - MIR SINE MIR -2 260 158 533 105 11 11 chr10 100242124 100242219 -40074546 - L1MB2 LINE L1 -4 6167 6073 917 199 73 53 chr10 100242219 100242358 -40074407 - MIR SINE MIR -104 158 10 252 100 0 0 chr10 100242944 100242984 -40073781 + (T)n Simple_repeat Simple_repeat 1 40 0 2058 145 0 3 chr10 100244122 100244418 -40072347 - AluJb SINE Alu -17 295 1 898 154 0 51 chr10 100244509 100244684 -40072081 - L1MB5 LINE L1 -1 6173 6008 418 235 19 11 chr10 100245705 100245824 -40070941 - MIR SINE MIR -63 145 37 296 254 0 0 chr10 100246209 100246276 -40070489 + MIR3 SINE MIR 88 154 -54 938 172 35 11 chr10 100246387 100246561 -40070204 - MER45A DNA AcHobo 0 178 1 1375 191 79 4 chr10 100248249 100248393 -40068372 - AluJo SINE Alu -25 287 155 378 0 0 0 chr10 100248393 100248435 -40068330 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1375 191 79 4 chr10 100248435 100248557 -40068208 - AluJo SINE Alu -157 155 1 964 164 159 0 chr10 100249057 100249246 -40067519 - MER20 DNA MER1_type 0 219 1 342 282 112 53 chr10 100250139 100250309 -40066456 - MIR SINE MIR -14 248 69 549 288 90 0 chr10 100250901 100251123 -40065642 + L3 LINE CR1 627 868 -709 440 210 152 29 chr10 100251175 100251313 -40065452 - MIR SINE MIR -26 236 82 1425 72 29 19 chr10 100253690 100253899 -40062866 + L1PA7 LINE L1 5943 6153 -1 618 164 0 0 chr10 100256081 100256203 -40060562 + GA-rich Low_complexity Low_complexity 2 123 0 2605 65 7 3 chr10 100257034 100257344 -40059421 - AluY SINE Alu 0 311 1 732 242 87 85 chr10 100257667 100257881 -40058884 + L1ME3A LINE L1 5475 5687 -483 2252 129 3 0 chr10 100257881 100258192 -40058573 - AluSx SINE Alu 0 312 1 732 242 87 85 chr10 100258192 100258445 -40058320 + L1ME3A LINE L1 5687 5951 -219 255 61 0 0 chr10 100258708 100258741 -40058024 + (A)n Simple_repeat Simple_repeat 1 33 0 450 298 21 7 chr10 100258971 100259112 -40057653 - MIR SINE MIR -105 157 15 180 288 34 0 chr10 100259190 100259249 -40057516 + MIR SINE MIR 87 147 -61 359 302 8 32 chr10 100259620 100259746 -40057019 - MIR SINE MIR -80 182 60 2660 119 6 0 chr10 100260948 100261301 -40055464 + THE1A LTR MaLR 1 355 0 790 277 105 42 chr10 100261536 100262513 -40054252 + L1MC4a LINE L1 4541 5584 -816 2504 166 62 2 chr10 100262519 100262953 -40053812 + MER66B LTR ERV1 27 486 0 807 218 81 5 chr10 100262953 100263150 -40053615 + L1MC4a LINE L1 5580 5791 -2017 407 249 106 42 chr10 100263155 100263296 -40053469 + L1MC4a LINE L1 5948 6109 -1699 1668 147 49 3 chr10 100263296 100263582 -40053183 - AluJb SINE Alu -13 299 1 407 249 106 42 chr10 100263582 100263657 -40053108 + L1MC4a LINE L1 6109 6178 -1630 229 279 29 79 chr10 100263718 100263858 -40052907 + L1MC4a LINE L1 6277 6409 -1399 400 197 134 47 chr10 100264007 100264198 -40052567 + L1MC4 LINE L1 6618 6902 -991 959 141 12 37 chr10 100264267 100264430 -40052335 - AluJb SINE Alu -21 291 133 393 221 34 27 chr10 100264447 100264596 -40052169 + L1MC4 LINE L1 6935 7084 -958 649 234 16 21 chr10 100264708 100264900 -40051865 + L1MC4 LINE L1 7093 7283 -759 403 281 0 25 chr10 100265084 100265205 -40051560 + MER94 DNA DNA 2 119 -15 235 235 20 82 chr10 100265222 100265320 -40051445 + L1MC5 LINE L1 7349 7440 -521 496 228 206 41 chr10 100265361 100265625 -40051140 + L1MC4 LINE L1 7636 8033 -9 323 328 17 0 chr10 100266246 100266365 -40050400 - MER117 DNA MER1_type -70 127 7 468 172 108 0 chr10 100266720 100266813 -40049952 + MER53 DNA DNA 3 105 -84 182 233 33 133 chr10 100266843 100266963 -40049802 - MIR SINE MIR -74 134 27 661 319 29 18 chr10 100267426 100267758 -40049007 + L1ME4a LINE L1 5284 5618 -503 26 0 0 0 chr10 100267763 100267789 -40048976 + AT_rich Low_complexity Low_complexity 1 26 0 528 283 93 33 chr10 100267796 100268096 -40048669 + L1ME4a LINE L1 5704 6021 -100 1425 223 68 53 chr10 100268223 100268676 -40048089 - MLT1C LTR MaLR 0 467 8 2627 163 80 7 chr10 100268676 100269129 -40047636 + MER66B LTR ERV1 1 486 0 350 200 80 0 chr10 100269193 100269268 -40047497 - MLT1K LTR MaLR 0 588 508 1456 174 150 21 chr10 100269399 100269779 -40046986 - MER63B DNA MER1_type 0 436 8 237 415 39 43 chr10 100270367 100270601 -40046164 - L2 LINE L2 -94 3178 2946 201 74 0 0 chr10 100271189 100271216 -40045549 + (TG)n Simple_repeat Simple_repeat 2 28 0 2089 86 47 4 chr10 100272082 100272361 -40044404 + AluSq SINE Alu 1 291 -22 25 31 0 0 chr10 100272361 100272393 -40044372 + AT_rich Low_complexity Low_complexity 1 32 0 517 211 254 0 chr10 100272435 100272577 -40044188 - MER45A DNA AcHobo 0 178 1 360 321 107 6 chr10 100274107 100274275 -40042490 - MIR SINE MIR -74 188 4 409 251 35 12 chr10 100274460 100274631 -40042134 + L1P LINE L1 4875 5049 -1097 183 162 0 0 chr10 100274637 100274674 -40042091 + (CACCC)n Simple_repeat Simple_repeat 4 40 0 710 258 61 48 chr10 100274714 100275228 -40041537 + L1MC/D LINE L1 5093 5610 -743 2790 135 24 28 chr10 100275430 100275896 -40040869 - L1PB4 LINE L1 -7 6149 5686 1751 147 89 16 chr10 100275906 100276220 -40040545 - L1MC1 LINE L1 0 6333 5997 488 317 21 0 chr10 100276220 100276365 -40040400 - MIR SINE MIR -68 194 47 466 267 40 45 chr10 100277689 100277865 -40038900 - MER5B DNA MER1_type 0 178 4 1265 201 106 34 chr10 100277958 100278307 -40038458 + MLT1A2 LTR MaLR 1 374 0 839 262 44 33 chr10 100279281 100279552 -40037213 - LTR16A LTR ERVL -10 440 167 2176 128 0 0 chr10 100279717 100280015 -40036750 - AluSx SINE Alu -12 300 3 1674 189 0 17 chr10 100280375 100280666 -40036099 - AluJo SINE Alu -13 299 14 588 117 11 0 chr10 100280693 100280787 -40035978 - L1PB1 LINE L1 0 6151 6057 832 266 97 46 chr10 100280819 100281168 -40035597 + L2 LINE L2 2947 3313 0 438 224 0 0 chr10 100281777 100281862 -40034903 - MER63 DNA MER1_type 0 1062 978 213 242 242 8 chr10 100282005 100282137 -40034628 - L2 LINE L2 -925 2389 2227 253 306 88 20 chr10 100283432 100283579 -40033186 - MIR SINE MIR -75 187 31 799 194 0 19 chr10 100283852 100284007 -40032758 - AluJb SINE Alu -1 311 160 315 291 12 0 chr10 100284177 100284263 -40032502 - MIR SINE MIR -74 188 102 262 148 148 0 chr10 100284346 100284400 -40032365 + MLT1I LTR MaLR 309 370 -39 1484 241 132 32 chr10 100284637 100285262 -40031503 - LTR50 LTR ERVL -68 674 8 355 280 73 33 chr10 100285446 100285640 -40031125 - MIR SINE MIR -6 256 14 549 329 24 28 chr10 100285942 100286155 -40030610 - L3 LINE CR1 -71 1506 1295 2366 97 0 0 chr10 100286264 100286562 -40030203 + AluSq SINE Alu 1 298 -15 304 235 9 157 chr10 100286624 100286739 -40030026 + MIR SINE MIR 12 109 -153 195 160 160 92 chr10 100287547 100287666 -40029099 - MIR SINE MIR -109 153 27 2290 107 0 3 chr10 100289366 100289665 -40027100 - AluSc SINE Alu -11 298 1 195 277 190 7 chr10 100290237 100290374 -40026391 + MIR SINE MIR 54 215 -47 301 179 86 107 chr10 100290509 100290618 -40026147 + L1ME4a LINE L1 5962 6069 -52 2410 75 7 3 chr10 100290618 100290926 -40025839 - AluSc SINE Alu 0 309 1 301 179 86 107 chr10 100290926 100290956 -40025809 + L1ME4a LINE L1 6069 6098 -23 423 211 0 0 chr10 100290956 100291051 -40025714 + (TA)n Simple_repeat Simple_repeat 2 96 0 1515 145 114 0 chr10 100291051 100291313 -40025452 - AluJb SINE Alu -18 294 3 1412 186 107 60 chr10 100291863 100292293 -40024472 - LTR7 LTR ERV1 0 450 1 330 349 130 8 chr10 100292293 100292531 -40024234 - L3 LINE CR1 -884 693 427 193 366 89 20 chr10 100292563 100292664 -40024101 - L2 LINE L2 -27 3245 3138 1250 201 110 97 chr10 100292965 100293575 -40023190 + MER67B LTR ERV1 1 661 0 184 154 26 0 chr10 100294008 100294047 -40022718 + L2 LINE L2 3272 3311 -2 27 0 0 0 chr10 100294157 100294184 -40022581 + AT_rich Low_complexity Low_complexity 1 27 0 2209 122 0 16 chr10 100294906 100295217 -40021548 - AluSx SINE Alu -6 306 1 418 243 57 10 chr10 100295561 100295810 -40020955 + MLT1H1 LTR MaLR 41 341 -214 698 239 7 0 chr10 100295845 100295983 -40020782 + MLT1H1 LTR MaLR 417 555 0 439 297 42 61 chr10 100295983 100296148 -40020617 + MER5A DNA MER1_type 27 188 -1 201 299 331 7 chr10 100296765 100296919 -40019846 + MIR SINE MIR 1 204 -58 437 288 58 53 chr10 100297560 100297676 -40019089 + MIR SINE MIR 10 129 -133 2506 81 0 0 chr10 100297676 100297984 -40018781 - AluY SINE Alu -3 308 1 437 288 58 53 chr10 100297984 100298093 -40018672 + MIR SINE MIR 129 236 -26 216 152 0 0 chr10 100298446 100298479 -40018286 - MER5C DNA MER1_type -6 318 286 403 237 32 70 chr10 100298493 100298649 -40018116 - MER5C DNA MER1_type -146 178 29 221 91 36 36 chr10 100298994 100299049 -40017716 + (TAA)n Simple_repeat Simple_repeat 1 55 0 25 31 0 0 chr10 100299136 100299168 -40017597 + AT_rich Low_complexity Low_complexity 1 32 0 187 294 20 0 chr10 100300363 100300414 -40016351 - MIR3 SINE MIR -7 201 150 591 260 101 6 chr10 100300496 100300665 -40016100 + MIR SINE MIR 68 252 -10 25 31 0 0 chr10 100300725 100300757 -40016008 + AT_rich Low_complexity Low_complexity 1 32 0 2304 132 36 17 chr10 100300783 100301139 -40015626 + MLT1A1 LTR MaLR 3 365 0 386 247 0 0 chr10 100301176 100301257 -40015508 - MER112 DNA MER1_type -179 81 1 735 325 32 12 chr10 100301833 100302079 -40014686 + MIR SINE MIR 9 259 -3 257 0 30 0 chr10 100302185 100302218 -40014547 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 382 299 119 0 chr10 100303059 100303193 -40013572 + MIR3 SINE MIR 42 191 -17 350 21 21 0 chr10 100304195 100304242 -40012523 + (TC)n Simple_repeat Simple_repeat 2 49 0 180 176 0 0 chr10 100304251 100304285 -40012480 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 3954 145 35 92 chr10 100304328 100305106 -40011659 - MER50 LTR ERV1 -1 733 1 1041 176 156 99 chr10 100306069 100306297 -40010468 - MLT1A2 LTR MaLR 0 374 118 1810 144 41 7 chr10 100306297 100306589 -40010176 + AluSx SINE Alu 1 302 -10 1041 176 156 99 chr10 100306589 100306713 -40010052 - MLT1A2 LTR MaLR -256 118 2 282 306 82 30 chr10 100307037 100307171 -40009594 + MIR3 SINE MIR 10 150 -58 583 292 81 11 chr10 100307784 100307969 -40008796 + MIR SINE MIR 45 242 -20 23 0 0 0 chr10 100309589 100309612 -40007153 + AT_rich Low_complexity Low_complexity 1 23 0 415 290 110 35 chr10 100309821 100310021 -40006744 + L3 LINE CR1 1274 1488 -89 606 343 117 51 chr10 100310963 100311398 -40005367 + L2 LINE L2 2809 3272 0 211 195 0 0 chr10 100311699 100311740 -40005025 + (TG)n Simple_repeat Simple_repeat 2 42 0 621 216 115 0 chr10 100313997 100314145 -40002620 + MER5A DNA MER1_type 1 165 -24 2544 138 21 14 chr10 100314572 100315001 -40001764 - MSTB1 LTR MaLR 0 432 1 1241 195 0 12 chr10 100315038 100315279 -40001486 - AluJb SINE Alu -3 309 72 205 284 142 71 chr10 100315318 100315445 -40001320 + MIR3 SINE MIR 11 146 -62 671 229 21 36 chr10 100316054 100316246 -40000519 + MER5A DNA MER1_type 1 189 0 5486 164 18 23 chr10 100316276 100317397 -39999368 + L1MA7 LINE L1 5177 6291 0 422 356 43 26 chr10 100317419 100317652 -39999113 + MIR SINE MIR 20 256 -6 183 295 39 51 chr10 100317764 100317842 -39998923 - L2 LINE L2 -536 2778 2702 350 319 94 12 chr10 100318613 100318773 -39997992 - MIR3 SINE MIR -15 193 21 203 263 12 88 chr10 100318810 100318890 -39997875 - MIR SINE MIR -6 256 183 * 551 250 50 8 chr10 100318875 100318995 -39997770 - L2 LINE L2 0 3313 3189 2067 99 31 0 chr10 100319937 100320231 -39996534 + AluSx SINE Alu 1 303 -9 973 261 194 5 chr10 100320273 100320727 -39996038 - MLT1K LTR MaLR 0 588 22 187 275 117 58 chr10 100320794 100320914 -39995851 - L2 LINE L2 0 3272 3146 412 326 34 29 chr10 100320985 100321160 -39995605 - MER5B DNA MER1_type 0 178 3 1515 181 13 38 chr10 100322466 100322798 -39993967 - L1P4 LINE L1 -394 5767 5445 392 218 16 105 chr10 100323076 100323200 -39993565 - L2 LINE L2 -10 3303 3191 401 293 18 12 chr10 100323237 100323404 -39993361 - MER113 DNA MER1_type? -348 173 6 252 0 0 0 chr10 100323638 100323666 -39993099 + (T)n Simple_repeat Simple_repeat 1 28 0 3073 214 48 64 chr10 100323863 100324802 -39991963 - L1MEc LINE L1 -5181 1215 292 182 343 57 0 chr10 100325791 100325861 -39990904 + L2 LINE L2 3195 3268 -4 352 304 52 42 chr10 100326157 100326348 -39990417 - MIR3 SINE MIR -7 201 9 250 305 26 78 chr10 100326700 100326854 -39989911 - MIR SINE MIR -57 205 60 400 301 226 0 chr10 100328471 100328670 -39988095 - MIR SINE MIR -6 256 13 854 242 5 0 chr10 100329442 100329636 -39987129 + L1MEc LINE L1 52 246 -6150 * 1111 208 14 10 chr10 100329631 100329919 -39986846 - L1MEc LINE L1 -3954 2442 2154 * 1598 262 35 67 chr10 100329916 100330355 -39986410 - L1M4 LINE L1 -1488 4658 4206 2148 116 3 10 chr10 100330355 100330666 -39986099 - AluSq SINE Alu -4 309 1 1598 262 35 67 chr10 100330666 100330751 -39986014 - L1M4 LINE L1 -1940 4206 4120 2156 95 3 3 chr10 100330751 100331045 -39985720 - AluSq SINE Alu -19 294 1 1598 262 35 67 chr10 100331045 100331394 -39985371 - L1M4 LINE L1 -2026 4120 3812 392 79 386 20 chr10 100331828 100331929 -39984836 + L1MC5 LINE L1 7772 7909 -52 305 217 157 0 chr10 100331982 100332065 -39984700 - MER5B DNA MER1_type -76 102 7 419 290 0 75 chr10 100332162 100332355 -39984410 - MIR SINE MIR -60 202 25 357 212 199 20 chr10 100333336 100333487 -39983278 + L1ME LINE L1 5314 5491 -2317 2187 109 0 0 chr10 100333492 100333786 -39982979 - AluSg SINE Alu -16 294 1 23 33 0 0 chr10 100333795 100333825 -39982940 + AT_rich Low_complexity Low_complexity 1 30 0 1011 41 0 0 chr10 100333827 100333950 -39982815 + L1PA5 LINE L1 6032 6154 0 1120 250 90 0 chr10 100334189 100334489 -39982276 - L1ME3A LINE L1 -9 6161 5835 215 269 19 58 chr10 100334529 100334633 -39982132 - MIR SINE MIR -32 230 131 292 262 201 13 chr10 100335320 100335469 -39981296 + MIR SINE MIR 16 192 -70 295 306 73 44 chr10 100335583 100335732 -39981033 - MIR SINE MIR -34 174 13 891 219 75 18 chr10 100336220 100336448 -39980317 - MIR SINE MIR -17 245 5 267 258 165 0 chr10 100336707 100336804 -39979961 + MER81 DNA DNA 2 114 0 283 250 33 0 chr10 100337587 100337679 -39979086 + L1ME LINE L1 5589 5683 -438 2397 89 0 3 chr10 100338086 100338399 -39978366 + AluSx SINE Alu 1 312 0 301 232 53 21 chr10 100339647 100339742 -39977023 - MIR3 SINE MIR 0 208 111 191 313 121 10 chr10 100340095 100340194 -39976571 - MIR SINE MIR -58 150 41 362 290 18 17 chr10 100340713 100340838 -39975927 + MIR SINE MIR 12 132 -76 393 275 107 7 chr10 100341286 100341435 -39975330 - MIR SINE MIR -78 184 21 243 0 0 0 chr10 100341459 100341486 -39975279 + (A)n Simple_repeat Simple_repeat 1 27 0 956 192 18 55 chr10 100341486 100341705 -39975060 - L1MA9 LINE L1 -377 5935 5725 1253 293 167 34 chr10 100343040 100344100 -39972665 - L2 LINE L2 -272 3041 1843 491 237 104 87 chr10 100344100 100344273 -39972492 - MER5B DNA MER1_type -2 176 1 291 301 88 29 chr10 100344409 100344545 -39972220 + MIR SINE MIR 8 151 -111 270 143 48 170 chr10 100344829 100344898 -39971867 - LTR67 LTR ERVL -3 554 478 2258 78 0 0 chr10 100344898 100345182 -39971583 + AluSx SINE Alu 1 284 -28 1008 48 0 0 chr10 100345182 100345308 -39971457 + (CAATA)n Simple_repeat Simple_repeat 2 127 0 270 143 48 170 chr10 100345308 100345384 -39971381 - LTR67 LTR ERVL -77 480 426 1259 176 22 7 chr10 100345898 100346206 -39970559 - MLT1A1 LTR MaLR 0 365 13 1345 228 139 3 chr10 100346332 100346692 -39970073 + MLT1I LTR MaLR 1 409 0 300 338 42 7 chr10 100346776 100346918 -39969847 - L1MEc LINE L1 -4177 2219 2073 293 88 44 15 chr10 100346920 100346988 -39969777 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 520 227 136 28 chr10 100347246 100347422 -39969343 - LTR33 LTR ERVL 0 521 327 1257 71 172 10 chr10 100348287 100348485 -39968280 + MER30 DNA MER1_type 1 230 0 186 103 0 0 chr10 100349708 100349737 -39967028 + (CATA)n Simple_repeat Simple_repeat 3 31 0 385 285 106 0 chr10 100351734 100351857 -39964908 - MIR SINE MIR -13 249 114 241 250 50 0 chr10 100352502 100352562 -39964203 - L2 LINE L2 -27 3286 3224 2059 105 47 0 chr10 100352751 100353047 -39963718 + AluSx SINE Alu 1 310 -2 261 248 14 64 chr10 100353090 100353231 -39963534 + L2 LINE L2 2771 2904 -410 189 299 75 15 chr10 100353239 100353306 -39963459 - MIR SINE MIR -184 78 8 2211 100 7 0 chr10 100354312 100354621 -39962144 + AluSq SINE Alu 1 311 -2 740 275 186 0 chr10 100354990 100355372 -39961393 + LTR33 LTR ERVL 61 513 -8 1294 132 50 43 chr10 100356004 100356262 -39960503 - AluJo SINE Alu -52 260 1 195 184 0 0 chr10 100356277 100356315 -39960450 + GA-rich Low_complexity Low_complexity 3 40 0 2201 99 7 0 chr10 100356411 100356713 -39960052 - AluSx SINE Alu -8 304 1 296 263 55 81 chr10 100357287 100357462 -39959303 - MIR SINE MIR -70 138 13 659 249 110 25 chr10 100357465 100357702 -39959063 - MIR SINE MIR -2 260 4 457 362 80 5 chr10 100357787 100358011 -39958754 - MIR SINE MIR -20 242 2 212 333 98 0 chr10 100358691 100358814 -39957951 + MER91B DNA MER1_type 18 152 -38 725 280 24 14 chr10 100359732 100359943 -39956822 - MIR SINE MIR -32 230 18 524 281 120 9 chr10 100360357 100360574 -39956191 + MIR SINE MIR 17 257 -5 277 302 171 8 chr10 100360777 100360906 -39955859 - MIR3 SINE MIR -46 162 13 909 265 40 0 chr10 100361795 100362018 -39954747 - MIR SINE MIR -18 244 13 242 234 13 91 chr10 100362399 100362476 -39954289 + L2 LINE L2 2989 3059 -213 469 251 35 80 chr10 100362670 100362812 -39953953 - MIR SINE MIR 0 262 130 2451 91 0 0 chr10 100362812 100363119 -39953646 + AluSp SINE Alu 1 307 -6 469 251 35 80 chr10 100363119 100363175 -39953590 - MIR SINE MIR -132 130 73 498 187 49 24 chr10 100363278 100363401 -39953364 + MIR SINE MIR 70 195 -67 2326 41 0 52 chr10 100363705 100363995 -39952770 + AluY SINE Alu 37 311 0 1619 100 166 12 chr10 100364010 100364269 -39952496 + AluSg SINE Alu 1 299 -1 291 197 127 0 chr10 100365272 100365343 -39951422 - MER45A DNA AcHobo 0 178 99 226 139 0 0 chr10 100365339 100365382 -39951383 - AluSc SINE Alu -1 298 256 * 1685 82 9 5 chr10 100365382 100365601 -39951164 - AluSc SINE Alu -89 220 1 466 220 30 0 chr10 100365603 100365703 -39951062 - MER45A DNA AcHobo -73 105 3 1555 175 161 3 chr10 100365785 100366127 -39950638 + MSTD LTR MaLR 1 396 0 183 316 92 0 chr10 100366177 100366351 -39950414 - L2 LINE L2 -215 3057 2868 1611 216 45 37 chr10 100366537 100366581 -39950184 + MLT1C LTR MaLR 1 43 -424 2194 98 70 53 chr10 100366581 100366876 -39949889 + THE1B LTR MaLR 1 305 -59 2305 86 0 52 chr10 100366876 100367203 -39949562 - AluSg SINE Alu 0 310 1 2194 98 70 53 chr10 100367203 100367265 -39949500 + THE1B LTR MaLR 305 364 0 1611 216 45 37 chr10 100367265 100367683 -39949082 + MLT1C LTR MaLR 43 467 0 21 0 0 0 chr10 100368307 100368328 -39948437 + AT_rich Low_complexity Low_complexity 1 21 0 233 194 0 16 chr10 100368371 100368433 -39948332 + GA-rich Low_complexity Low_complexity 3 63 0 402 318 55 0 chr10 100368454 100368564 -39948201 - MIR3 SINE MIR -52 156 41 2328 92 3 0 chr10 100371394 100371689 -39945076 + AluSg SINE Alu 1 296 -14 457 292 303 14 chr10 100371736 100372099 -39944666 - L3 LINE CR1 -5 1572 1105 343 282 99 47 chr10 100372392 100372605 -39944160 + MIR SINE MIR 20 243 -19 1339 203 50 40 chr10 100374049 100374370 -39942395 + MER33 DNA MER1_type 1 324 0 267 256 163 35 chr10 100374493 100374579 -39942186 - L2 LINE L2 0 3272 3176 212 286 0 32 chr10 100374795 100374858 -39941907 + MIR3 SINE MIR 13 73 -135 348 234 189 0 chr10 100374868 100374979 -39941786 + MIR SINE MIR 120 251 -11 576 176 82 41 chr10 100375585 100375755 -39941010 - MER53 DNA DNA -12 177 1 2316 154 7 141 chr10 100375973 100376556 -39940209 + MLT1D LTR MaLR 1 505 0 228 67 0 0 chr10 100376993 100377023 -39939742 + (T)n Simple_repeat Simple_repeat 1 30 0 213 300 17 75 chr10 100377204 100377324 -39939441 - MIR SINE MIR -80 182 70 457 302 185 5 chr10 100377953 100378158 -39938607 + MIR SINE MIR 20 261 -1 437 264 90 24 chr10 100379514 100379681 -39937084 - MER5B DNA MER1_type 0 178 1 186 43 0 0 chr10 100379850 100379873 -39936892 + (T)n Simple_repeat Simple_repeat 1 23 0 295 310 0 11 chr10 100380051 100380138 -39936627 - MIR3 SINE MIR -53 155 70 834 120 49 77 chr10 100382070 100382138 -39934627 + L1MB8 LINE L1 5987 6055 -123 2343 112 0 0 chr10 100382138 100382443 -39934322 - AluY SINE Alu -6 305 1 834 120 49 77 chr10 100382443 100382557 -39934208 + L1MB8 LINE L1 6055 6164 -14 757 179 136 0 chr10 100383396 100383580 -39933185 - MIR SINE MIR -14 248 40 202 271 0 0 chr10 100383582 100383630 -39933135 + (CACCAT)n Simple_repeat Simple_repeat 2 49 0 219 36 0 0 chr10 100383630 100383658 -39933107 + (A)n Simple_repeat Simple_repeat 1 28 0 276 30 0 0 chr10 100384776 100384809 -39931956 + (CA)n Simple_repeat Simple_repeat 2 34 0 407 125 14 0 chr10 100385117 100385189 -39931576 + MER53 DNA DNA 1 73 -116 339 299 116 0 chr10 100385238 100385385 -39931380 + MIR3 SINE MIR 41 204 -4 280 247 124 11 chr10 100385655 100385744 -39931021 - MER5B DNA MER1_type -79 99 1 3461 200 49 82 chr10 100386539 100387541 -39929224 + LTR5 LTR ERVK 1 969 0 377 219 76 42 chr10 100387648 100387767 -39928998 - L1ME4a LINE L1 -17 6104 5982 1071 269 51 11 chr10 100387990 100388365 -39928400 - L1ME4a LINE L1 -157 5964 5575 373 302 74 20 chr10 100389118 100389267 -39927498 - L2 LINE L2 -1 3271 3115 453 309 124 23 chr10 100390624 100390841 -39925924 + MIR SINE MIR 11 249 -13 246 290 0 0 chr10 100391083 100391176 -39925589 + (CGTG)n Simple_repeat Simple_repeat 3 95 0 372 252 19 19 chr10 100391206 100391313 -39925452 + MER5B DNA MER1_type 3 109 -69 544 343 114 5 chr10 100392059 100392278 -39924487 + MIR SINE MIR 1 243 -19 265 318 0 0 chr10 100392463 100392526 -39924239 - L2 LINE L2 -4 3309 3247 252 282 92 43 chr10 100392741 100392904 -39923861 + MIR SINE MIR 4 174 -88 235 279 33 0 chr10 100392910 100392971 -39923794 + Zaphod DNA AcHobo 4 66 -3965 * 969 311 100 7 chr10 100392949 100393390 -39923375 + MER115 DNA AcHobo 87 568 -125 602 251 112 10 chr10 100393976 100394185 -39922580 + MIR SINE MIR 24 262 0 2399 82 0 49 chr10 100394232 100394560 -39922205 + AluSx SINE Alu 1 312 0 343 250 80 85 chr10 100397124 100397300 -39919465 + MIR3 SINE MIR 21 195 -13 322 360 195 18 chr10 100397497 100398396 -39918369 + L2 LINE L2 1711 2768 -546 234 298 36 83 chr10 100398500 100398668 -39918097 + L2 LINE L2 2901 3060 -212 675 62 0 0 chr10 100398837 100398934 -39917831 + (TC)n Simple_repeat Simple_repeat 1 97 0 628 253 31 62 chr10 100399499 100399753 -39917012 - MIR SINE MIR -5 257 14 1140 240 39 60 chr10 100400606 100401122 -39915643 + MLT1H LTR MaLR 37 541 -8 521 255 61 36 chr10 100401694 100401890 -39914875 - L2 LINE L2 0 3313 3113 296 194 13 77 chr10 100401892 100402047 -39914718 + (TAAA)n Simple_repeat Simple_repeat 3 147 0 190 256 0 0 chr10 100402317 100402356 -39914409 + MIR SINE MIR 107 145 -117 443 150 88 186 chr10 100402448 100402641 -39914124 - MIR3 SINE MIR -14 194 21 189 219 203 16 chr10 100403656 100403720 -39913045 + MIR3 SINE MIR 114 189 -19 1414 86 5 30 chr10 100404522 100404540 -39912225 + AluSq SINE Alu 120 137 -176 2385 98 0 0 chr10 100404540 100404846 -39911919 + AluSx SINE Alu 1 306 -6 1414 86 5 30 chr10 100404846 100405024 -39911741 + AluSq SINE Alu 137 311 -2 197 193 102 125 chr10 100405993 100406004 -39910761 - L3 LINE CR1 -1 1576 1566 2456 103 0 0 chr10 100406004 100406314 -39910451 + AluSq SINE Alu 1 310 -3 197 193 102 125 chr10 100406314 100406390 -39910375 - L3 LINE CR1 -11 1566 1491 802 258 94 79 chr10 100406672 100406951 -39909814 - L1MC/D LINE L1 -2027 5850 5558 4360 98 5 28 chr10 100406951 100407624 -39909141 + L1MA2 LINE L1 5647 6303 -1 802 258 94 79 chr10 100407624 100407864 -39908901 - L1MC/D LINE L1 -2319 5558 5323 2975 289 91 94 chr10 100407873 100408418 -39908347 - L1MEc LINE L1 -913 5302 4757 306 0 0 0 chr10 100408418 100408452 -39908313 + (TC)n Simple_repeat Simple_repeat 1 34 0 2975 289 91 94 chr10 100408452 100410941 -39905824 - L1MEc LINE L1 -1458 4757 2323 2193 119 3 3 chr10 100410941 100411253 -39905512 - AluSp SINE Alu -1 312 1 2975 289 91 94 chr10 100411253 100411375 -39905390 - L1MEc LINE L1 -3892 2323 2202 2299 101 7 0 chr10 100411808 100412104 -39904661 - AluSp SINE Alu -15 298 1 862 164 85 5 chr10 100412167 100412356 -39904409 + L1MA9 LINE L1 6087 6290 -22 2392 148 41 7 chr10 100413088 100413500 -39903265 + MSTB LTR MaLR 1 426 0 1985 142 0 19 chr10 100413595 100413913 -39902852 + AluJb SINE Alu 1 312 0 491 305 100 46 chr10 100414590 100415049 -39901716 - L2 LINE L2 -17 3296 2813 963 235 52 4 chr10 100415148 100415385 -39901380 - MIR SINE MIR -2 260 14 350 267 73 47 chr10 100416721 100416772 -39899993 - L1M4 LINE L1 -2920 3226 3178 2056 115 20 0 chr10 100416772 100417076 -39899689 - AluSx SINE Alu -2 310 1 350 267 73 47 chr10 100417076 100417174 -39899591 - L1M4 LINE L1 -2968 3178 3073 5067 171 42 3 chr10 100417193 100418021 -39898744 - L1MB7 LINE L1 -19 6165 5279 2402 64 0 0 chr10 100418021 100418317 -39898448 - AluY SINE Alu 0 311 16 5067 171 42 3 chr10 100418317 100418771 -39897994 - L1MB7 LINE L1 -905 5279 4844 537 262 83 14 chr10 100418770 100419060 -39897705 - L1M4 LINE L1 -3057 3089 2780 * 503 202 21 0 chr10 100419067 100419161 -39897604 - MER58B DNA MER1_type -1 340 245 420 75 0 0 chr10 100419293 100419360 -39897405 + Alu SINE Alu 242 308 -1 1789 122 12 0 chr10 100419612 100419867 -39896898 - AluSx SINE Alu -36 276 19 966 115 7 27 chr10 100419867 100420015 -39896750 + MER50 LTR ERV1 567 711 -23 900 242 40 70 chr10 100420275 100420573 -39896192 + Charlie8 DNA MER1_type 1 289 -2128 407 306 16 32 chr10 100420698 100420822 -39895943 + L2 LINE L2 3151 3272 0 707 235 6 11 chr10 100421857 100422036 -39894729 - MER5B DNA MER1_type 0 178 1 299 333 32 16 chr10 100422037 100422160 -39894605 + MIR SINE MIR 5 129 -133 378 222 26 16 chr10 100423453 100423540 -39893225 - MIR SINE MIR -95 113 28 953 288 95 32 chr10 100423627 100424130 -39892635 + MLT1H LTR MaLR 2 536 -13 390 278 235 42 chr10 100424445 100425020 -39891745 + L1MC4a LINE L1 5272 5960 -161 2421 45 0 0 chr10 100425392 100425684 -39891081 + AluY SINE Alu 1 292 -19 937 211 16 0 chr10 100426342 100426536 -39890229 + L1MB5 LINE L1 5978 6174 0 2093 131 156 8 chr10 100426857 100427216 -39889549 + MSTA LTR MaLR 17 428 0 1433 178 0 0 chr10 100427216 100427446 -39889319 + MLT1A1 LTR MaLR 134 363 -2 336 258 144 0 chr10 100427453 100427550 -39889215 + L1MC/D LINE L1 5373 5483 -2325 349 314 57 0 chr10 100427607 100427731 -39889034 - L2 LINE L2 -5 3267 3137 345 312 46 0 chr10 100428168 100428277 -39888488 - L2 LINE L2 0 3272 3159 403 231 52 10 chr10 100428528 100428673 -39888092 - MIR SINE MIR -62 146 15 419 152 37 11 chr10 100428802 100428902 -39887863 - MLT1A1 LTR MaLR -7 463 259 3038 164 28 21 chr10 100429004 100429536 -39887229 + MER82 DNA MER2_type 118 653 0 185 287 89 10 chr10 100429823 100429924 -39886841 + MIR SINE MIR 33 141 -67 1854 130 0 63 chr10 100430487 100430802 -39885963 + AluSx SINE Alu 1 295 -17 180 286 254 0 chr10 100431007 100431070 -39885695 + L2 LINE L2 3154 3232 -40 895 224 114 12 chr10 100432183 100432429 -39884336 - Charlie8 DNA MER1_type -2129 288 18 371 256 12 0 chr10 100433282 100433368 -39883397 - MIR3 SINE MIR -34 174 88 738 171 0 118 chr10 100433608 100433795 -39882970 - FAM SINE Alu -10 165 1 384 339 36 20 chr10 100433898 100434093 -39882672 - L1M4 LINE L1 -1537 4609 4412 835 152 0 28 chr10 100434133 100434278 -39882487 - FLAM_C SINE Alu -1 142 2 1094 135 12 0 chr10 100434302 100434472 -39882293 - AluSg/x SINE Alu -9 303 132 2230 91 0 0 chr10 100434488 100434786 -39881979 - AluSq SINE Alu -14 299 2 343 234 140 64 chr10 100435055 100435226 -39881539 - L2 LINE L2 -29 3284 3101 347 242 77 11 chr10 100435989 100436080 -39880685 - MIR SINE MIR -81 181 85 515 320 113 5 chr10 100436933 100437127 -39879638 + MIR SINE MIR 34 248 -14 4207 89 9 2 chr10 100437177 100437727 -39879038 - MER41A LTR ERV1 0 554 1 1069 115 103 0 chr10 100437837 100438011 -39878754 - AluY SINE Alu -4 307 116 408 242 53 0 chr10 100438304 100438399 -39878366 - MIR SINE MIR -1 261 162 282 56 0 0 chr10 100439043 100439079 -39877686 + (TG)n Simple_repeat Simple_repeat 1 36 0 502 340 113 6 chr10 100439282 100439600 -39877165 - L2 LINE L2 -541 2773 2422 249 243 128 20 chr10 100439773 100439894 -39876871 - MIR SINE MIR -37 171 41 471 275 54 27 chr10 100440502 100440651 -39876114 - L2 LINE L2 0 3313 3161 739 217 72 59 chr10 100440693 100440914 -39875851 - L2 LINE L2 -338 2976 2753 330 299 63 68 chr10 100441048 100441284 -39875481 - MIR3 SINE MIR -12 250 11 342 329 124 53 chr10 100441698 100442093 -39874672 + L2 LINE L2 2830 3252 -20 606 99 0 0 chr10 100442102 100442193 -39874572 + (TGGA)n Simple_repeat Simple_repeat 2 92 0 994 149 6 29 chr10 100442310 100442485 -39874280 - MER5B DNA MER1_type 0 178 8 481 317 57 48 chr10 100443599 100443829 -39872936 - MIR SINE MIR -3 259 28 478 296 226 10 chr10 100444023 100444439 -39872326 - L2 LINE L2 -1 3312 2807 564 277 69 6 chr10 100444518 100444677 -39872088 - MIR SINE MIR -72 190 22 517 278 122 21 chr10 100445037 100445163 -39871602 + L1ME4a LINE L1 5492 5604 -517 2054 136 0 0 chr10 100445163 100445472 -39871293 + AluSx SINE Alu 1 309 -3 517 278 122 21 chr10 100445472 100445680 -39871085 + L1ME4a LINE L1 5604 5860 -261 2269 97 0 6 chr10 100445962 100446273 -39870492 - AluSq SINE Alu -4 309 1 284 345 101 0 chr10 100446359 100446478 -39870287 + MIR SINE MIR 14 144 -118 527 300 22 22 chr10 100447579 100447802 -39868963 + L1MC/D LINE L1 5439 5661 -2147 23 0 0 0 chr10 100447881 100447904 -39868861 + AT_rich Low_complexity Low_complexity 1 23 0 1781 98 4 0 chr10 100447904 100448140 -39868625 + AluSp SINE Alu 1 237 -76 180 0 0 0 chr10 100448149 100448169 -39868596 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1916 83 0 11 chr10 100448278 100448542 -39868223 - AluY SINE Alu -50 261 1 500 298 80 47 chr10 100448543 100449183 -39867582 - L1M4 LINE L1 -751 5395 4735 283 213 75 0 chr10 100449203 100449283 -39867482 - MLT1J LTR MaLR -11 500 415 1878 131 3 20 chr10 100449296 100449601 -39867164 + AluSx SINE Alu 1 300 -12 2235 94 133 27 chr10 100449663 100450068 -39866697 + LTR7 LTR ERV1 1 448 -2 8388 92 26 16 chr10 100450076 100451318 -39865447 + HERVH LTR ERV1 785 2038 -5675 1641 85 144 30 chr10 100451601 100451871 -39864894 - AluSx SINE Alu -2 310 10 332 288 97 59 chr10 100453091 100453379 -39863386 + LTR16C LTR ERVL 193 491 0 1808 152 7 3 chr10 100453730 100454019 -39862746 - AluJo SINE Alu -20 292 3 2002 133 0 0 chr10 100454077 100454370 -39862395 + AluSx SINE Alu 1 293 -19 2353 62 0 3 chr10 100454481 100454786 -39861979 + AluY SINE Alu 1 304 -7 2049 88 3 3 chr10 100454786 100455103 -39861662 + AluY SINE Alu 1 317 0 1646 174 6 83 chr10 100455103 100455634 -39861131 + L1MB3 LINE L1 5573 6022 -157 3585 135 0 8 chr10 100455634 100456152 -39860613 - MER1A DNA MER1_type 0 529 16 674 162 29 0 chr10 100456152 100456288 -39860477 + L1MB3 LINE L1 6016 6155 -28 1690 149 0 0 chr10 100456386 100456655 -39860110 + AluSx SINE Alu 39 307 -5 329 249 171 49 chr10 100456917 100457122 -39859643 - MIR SINE MIR -32 230 1 28 48 0 0 chr10 100457151 100457193 -39859572 + AT_rich Low_complexity Low_complexity 1 42 0 1898 147 20 0 chr10 100457220 100457349 -39859416 + AluSx SINE Alu 1 126 -186 180 0 0 0 chr10 100457349 100457369 -39859396 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1898 147 20 0 chr10 100457369 100457545 -39859220 + AluSx SINE Alu 126 312 0 1331 178 87 7 chr10 100457613 100457888 -39858877 - AluJb SINE Alu -15 297 1 742 176 0 0 chr10 100457900 100458025 -39858740 - AluSg/x SINE Alu -16 294 170 1794 130 0 14 chr10 100458025 100458309 -39858456 + AluSx SINE Alu 33 312 0 2262 198 41 87 chr10 100458311 100458953 -39857812 - LTR8 LTR ERV1 -76 561 1 1892 134 10 33 chr10 100459114 100459420 -39857345 + AluSx SINE Alu 1 299 -13 2635 170 110 73 chr10 100459715 100460416 -39856349 + LTR8A LTR ERV1 1 727 0 254 61 0 0 chr10 100460534 100460567 -39856198 - MLT1G LTR MaLR -5 585 553 1998 128 0 13 chr10 100461018 100461323 -39855442 + AluSq SINE Alu 1 301 -12 2270 74 0 0 chr10 100461325 100461630 -39855135 + AluY SINE Alu 1 305 0 576 193 22 67 chr10 100461788 100461923 -39854842 - MER5A DNA MER1_type 0 189 61 31 26 0 0 chr10 100461947 100461985 -39854780 + AT_rich Low_complexity Low_complexity 1 38 0 327 197 70 0 chr10 100462002 100462073 -39854692 - MER5A DNA MER1_type -113 76 1 463 296 57 6 chr10 100462515 100462674 -39854091 - MIR SINE MIR -50 212 46 1905 126 16 13 chr10 100462888 100463197 -39853568 + AluSx SINE Alu 1 310 -2 1972 144 3 0 chr10 100463246 100463551 -39853214 + AluSx SINE Alu 1 306 -6 2178 199 16 129 chr10 100463560 100463731 -39853034 - L1ME1 LINE L1 -69 6097 5908 1630 192 7 0 chr10 100463731 100464023 -39852742 - AluJb SINE Alu -18 294 1 2178 199 16 129 chr10 100464023 100464141 -39852624 - L1ME1 LINE L1 -258 5908 5778 1951 152 0 0 chr10 100464141 100464444 -39852321 - AluSx SINE Alu -9 303 1 2178 199 16 129 chr10 100464444 100464927 -39851838 - L1PB1 LINE L1 -388 5778 5412 2507 88 6 25 chr10 100464929 100465109 -39851656 + L1PB1 LINE L1 5794 5965 -186 2643 10 0 3 chr10 100465109 100465410 -39851355 + AluYa5 SINE Alu 1 300 -11 2507 88 6 25 chr10 100465410 100465593 -39851172 + L1PB1 LINE L1 5965 6150 -1 1820 118 3 35 chr10 100465600 100465915 -39850850 + AluSx SINE Alu 1 305 -7 2332 80 3 13 chr10 100465917 100466231 -39850534 + AluSp SINE Alu 1 311 -2 385 189 110 47 chr10 100466256 100466383 -39850382 + L1MC/D LINE L1 5290 5427 -742 24 53 0 0 chr10 100466383 100466421 -39850344 + AT_rich Low_complexity Low_complexity 1 38 0 996 252 3 17 chr10 100466511 100466805 -39849960 + L1 LINE L1 3821 4110 -2036 2052 108 0 3 chr10 100466822 100467110 -39849655 - AluSx SINE Alu -24 288 2 310 330 43 76 chr10 100467168 100467353 -39849412 + L1ME3 LINE L1 5692 5870 -292 2061 90 21 7 chr10 100467439 100467727 -39849038 + AluSq SINE Alu 1 292 -21 799 135 0 0 chr10 100467949 100468060 -39848705 + AluSc SINE Alu 2 112 -197 1081 51 0 0 chr10 100468199 100468336 -39848429 - AluYa5/8 SINE Alu -8 302 166 454 265 38 81 chr10 100468344 100468408 -39848357 + L1MC/D LINE L1 5561 5626 -495 4287 70 7 7 chr10 100468408 100468962 -39847803 - MER41A LTR ERV1 0 554 1 454 265 38 81 chr10 100468962 100469167 -39847598 + L1MC/D LINE L1 5626 5824 -297 2374 66 3 3 chr10 100469170 100469474 -39847291 + AluY SINE Alu 1 304 -7 2038 125 3 0 chr10 100469637 100469934 -39846831 + AluSx SINE Alu 1 298 -14 1253 263 101 34 chr10 100470076 100470628 -39846137 + L1ME LINE L1 41 629 -5441 509 156 73 0 chr10 100470657 100470753 -39846012 + L1ME LINE L1 2590 2692 -3388 382 184 149 18 chr10 100470799 100470913 -39845852 + L1ME LINE L1 2672 2800 -3280 1047 197 0 5 chr10 100470918 100471116 -39845649 - AluJb SINE Alu -14 298 102 2747 236 47 44 chr10 100471155 100471540 -39845225 + L1ME LINE L1 2807 3189 -2891 315 0 0 0 chr10 100471540 100471575 -39845190 + (CA)n Simple_repeat Simple_repeat 2 36 0 2747 236 47 44 chr10 100471575 100471618 -39845147 + L1ME LINE L1 3189 3230 -2850 356 153 0 0 chr10 100471618 100471677 -39845088 + L1MA3 LINE L1 6247 6305 0 2747 236 47 44 chr10 100471677 100472198 -39844567 + L1ME LINE L1 3230 3760 -2320 574 254 97 32 chr10 100472314 100472499 -39844266 + MIR3 SINE MIR 9 205 -3 2422 65 10 0 chr10 100472691 100472999 -39843766 - AluY SINE Alu 0 311 1 199 200 0 83 chr10 100473038 100473098 -39843667 + MIR SINE MIR 2 56 -206 2042 109 0 10 chr10 100473110 100473403 -39843362 - AluSx SINE Alu -22 290 1 418 244 281 6 chr10 100473408 100473572 -39843193 + MIR SINE MIR 48 256 -6 966 232 30 67 chr10 100473582 100473879 -39842886 - MLT1J LTR MaLR -2 509 224 377 252 24 32 chr10 100474073 100474196 -39842569 - MLT1J LTR MaLR -381 130 9 422 246 19 168 chr10 100474263 100474345 -39842420 + L3 LINE CR1 737 830 -747 2209 106 0 0 chr10 100474345 100474657 -39842108 - AluSx SINE Alu 0 312 1 422 246 19 168 chr10 100474657 100474842 -39841923 + L3 LINE CR1 830 964 -613 201 333 0 13 chr10 100474954 100475029 -39841736 + MIR SINE MIR 49 122 -140 313 272 49 0 chr10 100475530 100475611 -39841154 + MIR3 SINE MIR 81 165 -43 680 217 57 13 chr10 100475948 100476051 -39840714 + MIR SINE MIR 7 121 -141 1998 120 0 19 chr10 100476051 100476360 -39840405 - AluSg SINE Alu -7 303 1 680 217 57 13 chr10 100476360 100476413 -39840352 + MIR SINE MIR 121 170 -92 1754 184 55 52 chr10 100477400 100477473 -39839292 + MLT1D LTR MaLR 103 174 -331 2737 13 0 0 chr10 100477473 100477782 -39838983 - AluYa5 SINE Alu -2 309 1 1754 184 55 52 chr10 100477782 100478110 -39838655 + MLT1D LTR MaLR 174 505 0 465 326 88 14 chr10 100478321 100478536 -39838229 + MIR SINE MIR 20 250 -12 24 100 0 0 chr10 100479134 100479214 -39837551 + GC_rich Low_complexity Low_complexity 1 80 0 243 316 0 13 chr10 100480080 100480159 -39836606 - L2 LINE L2 -75 3238 3161 231 253 330 9 chr10 100480582 100480815 -39835950 - L2 LINE L2 -175 3138 2831 1709 190 35 19 chr10 100481311 100481680 -39835085 - L1MB8 LINE L1 0 6178 5804 239 276 191 9 chr10 100482161 100482266 -39834499 - L3 LINE CR1 -392 1185 1062 2199 98 14 0 chr10 100482369 100482666 -39834099 - AluSx SINE Alu -11 301 1 1862 137 0 3 chr10 100483333 100483647 -39833118 - AluSx SINE Alu 0 313 1 2406 67 0 0 chr10 100483738 100484037 -39832728 - AluY SINE Alu -12 299 1 5534 147 43 39 chr10 100484047 100485126 -39831639 - L1MC3 LINE L1 -1 7784 6702 673 285 72 30 chr10 100485181 100485416 -39831349 + MIR SINE MIR 4 248 -14 2316 85 0 0 chr10 100485460 100485755 -39831010 - AluSq SINE Alu -18 295 1 1064 125 0 30 chr10 100486032 100486113 -39830652 - AluJb SINE Alu -99 213 138 2352 72 0 22 chr10 100486113 100486431 -39830334 - AluY SINE Alu 0 311 1 1064 125 0 30 chr10 100486431 100486517 -39830248 - AluJb SINE Alu -174 138 51 375 174 51 0 chr10 100486625 100486723 -39830042 + CT-rich Low_complexity Low_complexity 3 105 0 2046 109 7 7 chr10 100486725 100487027 -39829738 - AluY SINE Alu -9 302 1 430 284 34 14 chr10 100487149 100487297 -39829468 - L1ME1 LINE L1 -6 6160 6010 258 105 0 0 chr10 100487297 100487335 -39829430 + (T)n Simple_repeat Simple_repeat 1 38 0 868 134 8 15 chr10 100487994 100488128 -39828637 - FLAM_C SINE Alu 0 133 1 1953 131 13 0 chr10 100488138 100488436 -39828329 - AluSx SINE Alu -10 302 1 1127 184 79 54 chr10 100488436 100488515 -39828250 - L1ME1 LINE L1 -315 5851 5775 1895 132 33 7 chr10 100488515 100488819 -39827946 - AluSx SINE Alu 0 312 1 1127 184 79 54 chr10 100488819 100489054 -39827711 - L1ME1 LINE L1 -391 5775 5529 1117 174 0 55 chr10 100489160 100489339 -39827426 - AluJo SINE Alu -2 310 146 1961 140 0 0 chr10 100489339 100489632 -39827133 - AluSx SINE Alu -19 293 1 1117 174 0 55 chr10 100489632 100489688 -39827077 - AluJo SINE Alu -166 146 88 285 177 138 161 chr10 100490436 100490518 -39826247 + LTR16A LTR ERVL 316 395 -55 1981 135 0 10 chr10 100490518 100490679 -39826086 - AluJb SINE Alu -18 294 136 2073 103 10 35 chr10 100490679 100490991 -39825774 - AluSq SINE Alu -9 304 1 1981 135 0 10 chr10 100490991 100491126 -39825639 - AluJb SINE Alu -176 136 1 285 177 138 161 chr10 100491126 100491173 -39825592 + LTR16A LTR ERVL 395 442 -8 454 293 64 45 chr10 100491455 100491680 -39825085 - MIR SINE MIR -27 235 10 205 223 62 115 chr10 100491745 100491823 -39824942 + MIR SINE MIR 20 90 -118 859 154 0 0 chr10 100491823 100491953 -39824812 - FLAM_C SINE Alu -2 131 2 205 223 62 115 chr10 100491953 100492004 -39824761 + MIR SINE MIR 90 142 -66 488 262 58 23 chr10 100492031 100492203 -39824562 + MIR SINE MIR 36 213 -49 1309 216 135 62 chr10 100492551 100492684 -39824081 + MLT1D LTR MaLR 5 127 -378 2040 94 3 56 chr10 100492684 100493003 -39823762 - AluSx SINE Alu -10 302 1 1309 216 135 62 chr10 100493003 100493271 -39823494 + MLT1D LTR MaLR 127 447 -58 1595 182 0 30 chr10 100493271 100493573 -39823192 + AluJb SINE Alu 4 296 -16 1309 216 135 62 chr10 100493573 100493637 -39823128 + MLT1D LTR MaLR 447 505 0 403 300 94 0 chr10 100494150 100494320 -39822445 + L1ME4a LINE L1 5731 5916 -205 449 199 66 59 chr10 100494323 100494459 -39822306 + MIR SINE MIR 125 261 -1 1041 163 0 0 chr10 100494485 100494657 -39822108 - AluSg/x SINE Alu -7 303 132 2309 92 0 0 chr10 100494657 100494963 -39821802 - AluSq SINE Alu -7 306 1 789 106 0 0 chr10 100494981 100495085 -39821680 - U6 snRNA snRNA -3 104 1 936 240 75 60 chr10 100495108 100495441 -39821324 - MER46C DNA MER2_type 0 338 1 180 0 0 0 chr10 100495516 100495536 -39821229 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 254 179 18 0 chr10 100495870 100495926 -39820839 + C-rich Low_complexity Low_complexity 1 57 0 2103 114 0 0 chr10 100495926 100496216 -39820549 - AluSg SINE Alu -20 290 1 1584 178 3 13 chr10 100496268 100496566 -39820199 + AluJo SINE Alu 1 295 -17 2148 112 0 13 chr10 100496575 100496888 -39819877 + AluSx SINE Alu 4 312 0 22 0 0 0 chr10 100498114 100498136 -39818629 + AT_rich Low_complexity Low_complexity 1 22 0 2265 76 0 0 chr10 100498136 100498424 -39818341 + AluSq SINE Alu 1 288 -25 373 219 9 9 chr10 100498444 100498549 -39818216 + CT-rich Low_complexity Low_complexity 1 105 0 474 167 0 0 chr10 100498549 100498627 -39818138 - AluS SINE Alu -14 297 220 635 250 27 0 chr10 100498653 100498801 -39817964 + FRAM SINE Alu 24 175 -1 586 183 8 8 chr10 100498816 100498871 -39817894 + L1MC2 LINE L1 3292 3346 -2800 1830 130 42 3 chr10 100498871 100499155 -39817610 + AluSx SINE Alu 1 295 -17 586 183 8 8 chr10 100499155 100499230 -39817535 + L1MC2 LINE L1 3345 3422 -2724 1608 174 10 3 chr10 100499232 100499520 -39817245 - Tigger1 DNA MER2_type -2128 290 1 3481 159 31 47 chr10 100499520 100500044 -39816721 + L1MC2 LINE L1 4986 5517 -827 1265 137 199 50 chr10 100500044 100500306 -39816459 + AluJo SINE Alu 1 301 -1 3481 159 31 47 chr10 100500306 100500565 -39816200 + L1MC2 LINE L1 5517 5779 -565 1754 147 126 9 chr10 100500565 100500899 -39815866 - THE1C LTR MaLR -2 373 1 3481 159 31 47 chr10 100500899 100501271 -39815494 + L1MC2 LINE L1 5779 6308 -36 318 250 24 122 chr10 100501421 100501585 -39815180 + MLT1J LTR MaLR 162 309 -202 2698 95 58 21 chr10 100501636 100502068 -39814697 - LTR7 LTR ERV1 -2 448 1 2533 111 49 39 chr10 100502068 100502657 -39814108 - HERVH LTR ERV1 0 7713 5592 * 15505 88 13 13 chr10 100502634 100504810 -39811955 - HERVH LTR ERV1 -4726 2987 812 2020 125 7 10 chr10 100505053 100505461 -39811304 + AluSx SINE Alu 1 407 0 22 0 0 0 chr10 100505528 100505550 -39811215 + AT_rich Low_complexity Low_complexity 1 22 0 1214 231 72 36 chr10 100505786 100506285 -39810480 + MER20B DNA MER1_type 267 783 0 1907 121 4 7 chr10 100506290 100506570 -39810195 + AluSx SINE Alu 1 279 -33 195 129 0 0 chr10 100506570 100506601 -39810164 + (GGAGA)n Simple_repeat Simple_repeat 2 32 0 2805 164 5 63 chr10 100507395 100507613 -39809152 + L1MB8 LINE L1 5611 5840 -338 799 164 0 0 chr10 100507613 100507729 -39809036 + FLAM_C SINE Alu 3 118 -15 2805 164 5 63 chr10 100507729 100508113 -39808652 + L1MB8 LINE L1 5840 6178 0 243 88 0 0 chr10 100508350 100508384 -39808381 + (A)n Simple_repeat Simple_repeat 1 34 0 351 282 47 38 chr10 100508398 100508611 -39808154 + L1 LINE L1 4805 5019 -1127 1508 196 0 3 chr10 100508801 100509086 -39807679 + AluJo SINE Alu 7 290 -22 325 271 93 16 chr10 100509167 100509296 -39807469 + L1M LINE L1 5290 5428 -736 1878 131 7 33 chr10 100509537 100509842 -39806923 + AluJb SINE Alu 1 297 -15 2308 78 3 0 chr10 100510240 100510533 -39806232 - AluSp SINE Alu -17 296 3 25 0 0 0 chr10 100510539 100510564 -39806201 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 100510619 100510640 -39806125 + AT_rich Low_complexity Low_complexity 1 21 0 1143 110 72 72 chr10 100510820 100511056 -39805709 + AluSg/x SINE Alu 77 312 0 257 20 0 143 chr10 100511060 100511109 -39805656 - L1MA7 LINE L1 -21 6270 6229 944 216 22 0 chr10 100511428 100511613 -39805152 - MER5A DNA MER1_type 0 189 1 2356 84 0 3 chr10 100512008 100512317 -39804448 - AluY SINE Alu -3 308 1 1062 273 54 79 chr10 100512356 100512656 -39804109 - MLT1J LTR MaLR -7 504 198 5931 72 10 12 chr10 100512656 100513461 -39803304 + L1PA8 LINE L1 5369 6171 -1 189 0 0 0 chr10 100513464 100513485 -39803280 + (CCA)n Simple_repeat Simple_repeat 3 23 0 1062 273 54 79 chr10 100513485 100513697 -39803068 - MLT1J LTR MaLR -315 196 1 261 195 143 26 chr10 100513700 100513818 -39802947 - L1MC4a LINE L1 -238 5883 5766 2241 125 0 0 chr10 100513818 100514121 -39802644 + AluSx SINE Alu 1 303 -9 1193 127 0 0 chr10 100514858 100515016 -39801749 + AluSg/x SINE Alu 135 292 -18 238 302 91 59 chr10 100515017 100515163 -39801602 - L1ME LINE L1 -313 5808 5668 2283 101 0 0 chr10 100515163 100515450 -39801315 + AluSx SINE Alu 2 288 -24 238 302 91 59 chr10 100515450 100515777 -39800988 - L1ME LINE L1 -453 5668 5320 2328 73 35 0 chr10 100515796 100516084 -39800681 - AluY SINE Alu -13 298 1 5528 144 45 39 chr10 100516094 100517171 -39799594 - L1MC3 LINE L1 -1 7784 6702 575 285 72 30 chr10 100517226 100517461 -39799304 + MIR SINE MIR 4 248 -14 2450 85 0 0 chr10 100517505 100517800 -39798965 - AluSq SINE Alu -18 295 1 1371 139 9 23 chr10 100518077 100518158 -39798607 - AluJb SINE Alu -99 213 132 2485 72 0 22 chr10 100518158 100518476 -39798289 - AluY SINE Alu 0 311 1 1371 139 9 23 chr10 100518476 100518610 -39798155 - AluJb SINE Alu -180 132 1 26 0 0 0 chr10 100519211 100519237 -39797528 + AT_rich Low_complexity Low_complexity 1 26 0 2704 41 0 13 chr10 100519638 100519952 -39796813 + AluY SINE Alu 1 310 -1 490 281 12 41 chr10 100520441 100520612 -39796153 + MIR3 SINE MIR 20 185 -23 232 260 26 0 chr10 100520777 100520854 -39795911 - MIR SINE MIR -6 256 178 * 655 232 61 20 chr10 100520851 100521049 -39795716 + MIR SINE MIR 54 259 -3 233 56 0 28 chr10 100521052 100521088 -39795677 + (TTA)n Simple_repeat Simple_repeat 3 37 0 258 298 40 53 chr10 100521112 100521170 -39795595 - L2 LINE L2 -298 2974 2917 2123 114 4 0 chr10 100521170 100521478 -39795287 + AluSx SINE Alu 1 309 0 258 298 40 53 chr10 100521478 100521569 -39795196 - L2 LINE L2 -355 2917 2826 2029 139 3 7 chr10 100522541 100522843 -39793922 - AluSx SINE Alu -11 301 1 2513 91 0 0 chr10 100523090 100523399 -39793366 - AluSx SINE Alu -3 309 1 2392 88 0 7 chr10 100524099 100524404 -39792361 + AluSg SINE Alu 1 303 -7 471 299 92 5 chr10 100524945 100525129 -39791636 + MIR3 SINE MIR 1 200 -8 2647 55 0 0 chr10 100525499 100525808 -39790957 + AluY SINE Alu 1 309 -2 1890 171 10 10 chr10 100525813 100526117 -39790648 + AluJb SINE Alu 1 304 -8 437 309 138 0 chr10 100526193 100526381 -39790384 + L3 LINE CR1 1337 1550 -27 456 239 107 19 chr10 100526845 100526944 -39789821 - MER5A DNA MER1_type 0 189 69 2399 105 0 3 chr10 100526944 100527257 -39789508 - AluSx SINE Alu 0 312 1 456 239 107 19 chr10 100527257 100527316 -39789449 - MER5A DNA MER1_type -120 69 17 331 197 0 0 chr10 100527797 100527858 -39788907 + MIR3 SINE MIR 122 182 -26 1885 172 0 3 chr10 100528515 100528817 -39787948 + AluJb SINE Alu 1 301 -11 204 40 0 0 chr10 100528873 100528898 -39787867 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 2881 138 37 16 chr10 100528899 100529044 -39787721 - L1MA9 LINE L1 -1 6311 6171 306 0 0 0 chr10 100529044 100529078 -39787687 + (TG)n Simple_repeat Simple_repeat 1 34 0 2881 138 37 16 chr10 100529078 100529172 -39787593 - L1MA9 LINE L1 -141 6171 6080 2427 86 0 0 chr10 100529172 100529474 -39787291 - AluSc SINE Alu -7 302 1 2881 138 37 16 chr10 100529474 100529746 -39787019 - L1MA9 LINE L1 -232 6080 5788 322 236 138 8 chr10 100530171 100530294 -39786471 - MIR SINE MIR -26 236 98 472 240 20 33 chr10 100530500 100530650 -39786115 + MER5A DNA MER1_type 34 181 -8 442 277 8 11 chr10 100531815 100531985 -39784780 - MIR SINE MIR -65 143 30 234 280 93 19 chr10 100532026 100532133 -39784632 - L2 LINE L2 -5 3308 3194 1109 197 115 17 chr10 100532138 100532433 -39784332 - MER33 DNA MER1_type 0 324 1 27 0 0 26 chr10 100532479 100532497 -39784268 + AT_rich Low_complexity Low_complexity 1 18 -19 2247 93 0 20 chr10 100532497 100532797 -39783968 - AluSp SINE Alu -19 294 1 27 0 0 26 chr10 100532797 100532816 -39783949 + AT_rich Low_complexity Low_complexity 18 37 0 1769 143 64 0 chr10 100532923 100533103 -39783662 - AluSx SINE Alu 0 319 113 669 20 60 10 chr10 100533103 100533203 -39783562 + (TTTAG)n Simple_repeat Simple_repeat 3 107 0 1769 143 64 0 chr10 100533203 100533324 -39783441 - AluSx SINE Alu -206 113 1 241 273 27 47 chr10 100533620 100533770 -39782995 + L1MC/D LINE L1 5764 5910 -1898 1798 156 20 33 chr10 100533953 100534255 -39782510 - AluJo SINE Alu -14 298 1 183 303 15 0 chr10 100534629 100534695 -39782070 + MIR SINE MIR 76 142 -120 1780 130 14 18 chr10 100536890 100537166 -39779599 + AluJo SINE Alu 32 306 -6 309 135 0 0 chr10 100537169 100537221 -39779544 + (GGGGA)n Simple_repeat Simple_repeat 2 53 0 450 252 43 0 chr10 100537223 100537338 -39779427 - MIR3 SINE MIR -31 177 58 327 271 8 83 chr10 100537354 100537487 -39779278 - L2 LINE L2 -8 3264 3142 443 292 146 9 chr10 100537943 100538176 -39778589 + L3 LINE CR1 806 1070 -507 642 157 0 0 chr10 100538226 100538347 -39778418 + (TCCA)n Simple_repeat Simple_repeat 2 122 0 408 202 36 107 chr10 100538347 100538515 -39778250 + L2 LINE L2 3158 3313 0 397 294 56 42 chr10 100538507 100538721 -39778044 + L3 LINE CR1 1138 1354 -223 * 285 56 0 0 chr10 100538951 100538987 -39777778 - tRNA-Cys-TGC tRNA tRNA -38 37 2 2225 117 7 7 chr10 100539109 100539416 -39777349 - AluSc SINE Alu -2 307 1 283 315 9 9 chr10 100540079 100540187 -39776578 + L3 LINE CR1 737 844 -733 301 279 0 36 chr10 100540229 100540340 -39776425 + L3 LINE CR1 843 949 -628 1622 164 18 22 chr10 100541152 100541427 -39775338 + AluJo SINE Alu 1 274 -38 377 335 18 6 chr10 100541565 100541732 -39775033 + L3 LINE CR1 1211 1379 -198 2454 67 0 38 chr10 100542111 100542427 -39774338 - AluY SINE Alu -7 304 1 367 181 0 174 chr10 100542819 100542883 -39773882 + L1MA8 LINE L1 6174 6203 -88 2273 116 3 3 chr10 100542883 100543193 -39773572 - AluSx SINE Alu -2 310 1 367 181 0 174 chr10 100543193 100543266 -39773499 + L1MA8 LINE L1 6203 6287 -4 243 370 74 0 chr10 100544088 100544304 -39772461 - L2 LINE L2 -832 2482 2251 203 244 0 0 chr10 100544328 100544369 -39772396 - L2 LINE L2 -18 3295 3255 2116 72 0 0 chr10 100544417 100544679 -39772086 - AluY SINE Alu -6 305 44 198 193 0 105 chr10 100547940 100547997 -39768768 + L2 LINE L2 3262 3312 -1 225 178 0 0 chr10 100549678 100549723 -39767042 + (TA)n Simple_repeat Simple_repeat 2 46 0 635 271 155 69 chr10 100550199 100550315 -39766450 + L3 LINE CR1 569 674 -903 2315 160 5 15 chr10 100550315 100550709 -39766056 + MLT1B LTR MaLR 1 390 0 635 271 155 69 chr10 100550709 100550944 -39765821 + L3 LINE CR1 674 887 -690 3132 104 11 0 chr10 100550944 100551385 -39765380 + L1PA13 LINE L1 5718 6163 0 635 271 155 69 chr10 100551385 100551567 -39765198 + L3 LINE CR1 887 1149 -428 594 275 103 46 chr10 100552029 100552291 -39764474 + MLT1L LTR MaLR 232 611 -3 2247 118 0 0 chr10 100552341 100552637 -39764128 - AluSx SINE Alu -16 296 1 214 283 200 0 chr10 100552683 100552803 -39763962 + L3 LINE CR1 1430 1573 -4 28 29 0 0 chr10 100553273 100553308 -39763457 + AT_rich Low_complexity Low_complexity 1 35 0 1765 160 0 62 chr10 100553313 100553440 -39763325 + AluJb SINE Alu 1 134 -178 2325 100 0 3 chr10 100553440 100553731 -39763034 - AluSx SINE Alu -22 290 1 1765 160 0 62 chr10 100553731 100553928 -39762837 + AluJb SINE Alu 134 305 -7 483 18 0 0 chr10 100554255 100554311 -39762454 + (TG)n Simple_repeat Simple_repeat 1 56 0 218 314 8 50 chr10 100554340 100554461 -39762304 - MIR3 SINE MIR -6 202 87 27 29 0 0 chr10 100556051 100556085 -39760680 + AT_rich Low_complexity Low_complexity 1 34 0 494 260 204 0 chr10 100556105 100556301 -39760464 - MIR SINE MIR -14 248 13 1160 274 82 30 chr10 100556309 100556691 -39760074 + LTR16B LTR ERVL 1 411 -53 2092 127 0 0 chr10 100556691 100556996 -39759769 + AluSx SINE Alu 1 305 0 1160 274 82 30 chr10 100556996 100557053 -39759712 + LTR16B LTR ERVL 411 464 0 295 279 114 43 chr10 100557246 100557386 -39759379 - L2 LINE L2 0 3313 3164 284 219 145 97 chr10 100557378 100557606 -39759159 - MIR SINE MIR -4 258 20 * 218 358 17 33 chr10 100558817 100558937 -39757828 + MIR SINE MIR 29 146 -62 1952 157 10 3 chr10 100559825 100560125 -39756640 - AluJb SINE Alu -10 302 1 210 118 0 0 chr10 100560190 100560224 -39756541 + (ATG)n Simple_repeat Simple_repeat 3 36 0 2127 79 75 0 chr10 100561709 100561989 -39754776 - AluSx SINE Alu -11 301 1 1572 146 114 11 chr10 100562094 100562375 -39754390 - AluSg SINE Alu 0 310 1 2255 110 0 7 chr10 100562737 100563036 -39753729 - AluSx SINE Alu -15 297 1 279 259 12 0 chr10 100563510 100563595 -39753170 + MER113 DNA MER1_type? 1 86 -435 337 186 0 0 chr10 100563595 100563654 -39753111 - L1MB8 LINE L1 -26 6152 6094 649 168 32 0 chr10 100563671 100563796 -39752969 - L1MB4 LINE L1 -6 6174 6046 944 254 62 11 chr10 100563796 100564151 -39752614 + MER113 DNA MER1_type? 68 440 -81 250 297 117 0 chr10 100564373 100564484 -39752281 + MIR SINE MIR 133 256 -6 490 281 85 18 chr10 100564975 100565198 -39751567 + MIR SINE MIR 1 236 -26 2451 57 0 0 chr10 100565445 100565746 -39751019 - AluY SINE Alu -10 301 1 433 259 67 86 chr10 100567565 100568114 -39748651 - L1ME4a LINE L1 -188 5933 5335 2345 93 7 0 chr10 100568226 100568536 -39748229 - AluSx SINE Alu 0 312 1 1770 135 16 68 chr10 100568548 100568918 -39747847 - L1MB8 LINE L1 -11 6167 5817 188 65 0 32 chr10 100568918 100568949 -39747816 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2777 9 0 6 chr10 100568966 100569285 -39747480 - AluYb8 SINE Alu -1 317 1 2115 82 0 7 chr10 100569285 100569565 -39747200 - AluSq SINE Alu -35 278 1 585 194 58 7 chr10 100569614 100569627 -39747138 - L1MB4 LINE L1 -340 5849 5837 816 133 2 9 chr10 100569627 100569804 -39746961 - L1MB8 LINE L1 -352 5826 5655 25 31 0 0 chr10 100569895 100569927 -39746838 + AT_rich Low_complexity Low_complexity 1 32 0 447 63 0 0 chr10 100570044 100570107 -39746658 + (TCCTG)n Simple_repeat Simple_repeat 2 64 0 841 142 64 0 chr10 100570112 100570253 -39746512 - AluJb SINE Alu -34 278 129 5782 140 32 66 chr10 100570253 100570686 -39746079 - L1MC1 LINE L1 -3 6330 5884 1793 132 14 20 chr10 100570686 100570982 -39745783 - AluSq SINE Alu -19 294 1 5782 140 32 66 chr10 100570982 100571792 -39744973 - L1MC1 LINE L1 -449 5884 5127 930 137 0 0 chr10 100572165 100572304 -39744461 - FLAM_C SINE Alu -4 139 1 2192 88 24 0 chr10 100573803 100574097 -39742668 - AluSq SINE Alu -12 301 1 198 0 0 0 chr10 100574205 100574227 -39742538 + (CA)n Simple_repeat Simple_repeat 1 22 0 2479 97 19 38 chr10 100575962 100576333 -39740432 - THE1B LTR MaLR 0 364 1 1812 165 0 10 chr10 100576360 100576663 -39740102 - AluSx SINE Alu -12 300 1 813 127 0 8 chr10 100576696 100576814 -39739951 + AluJb SINE Alu 2 118 -194 344 266 135 83 chr10 100576842 100577034 -39739731 + MER102b DNA MER1_type 124 325 -16 417 287 160 0 chr10 100577799 100577949 -39738816 - MER5A DNA MER1_type -7 182 9 330 195 164 55 chr10 100577968 100578096 -39738669 - MER5C DNA MER1_type 0 324 183 2108 111 0 3 chr10 100578097 100578395 -39738370 + AluSx SINE Alu 1 297 -15 2156 105 0 3 chr10 100578542 100578838 -39737927 - AluSg SINE Alu -15 295 1 258 32 0 0 chr10 100578843 100578874 -39737891 + (TTA)n Simple_repeat Simple_repeat 3 33 0 537 203 86 23 chr10 100578875 100579003 -39737762 - MER5C DNA MER1_type -175 149 14 331 221 51 70 chr10 100579333 100579378 -39737387 - L1ME LINE L1 -620 5501 5457 2304 75 3 0 chr10 100579378 100579670 -39737095 - AluY SINE Alu -18 293 1 331 221 51 70 chr10 100579670 100579782 -39736983 - L1ME LINE L1 -664 5457 5347 264 340 49 49 chr10 100581242 100581445 -39735320 + L2 LINE L2 2985 3187 -85 2047 117 10 0 chr10 100582619 100582909 -39733856 + AluSx SINE Alu 1 293 -19 603 296 54 5 chr10 100583430 100583633 -39733132 + MIR SINE MIR 2 214 -48 592 285 149 9 chr10 100584521 100584749 -39732016 - MIR SINE MIR 0 262 3 359 333 26 13 chr10 100585527 100585680 -39731085 + MIR SINE MIR 89 243 -19 2073 119 0 0 chr10 100585690 100585985 -39730780 - AluSx SINE Alu -17 295 1 247 297 7 90 chr10 100586026 100586181 -39730584 - L2 LINE L2 -7 3306 3165 568 242 91 3 chr10 100586765 100587227 -39729538 - MER20B DNA MER1_type 0 783 225 219 236 0 42 chr10 100587578 100587650 -39729115 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 836 251 77 0 chr10 100587659 100587866 -39728899 - MER20B DNA MER1_type -560 223 1 488 254 27 0 chr10 100588538 100588648 -39728117 - MIR SINE MIR -102 160 48 231 342 0 60 chr10 100588825 100588942 -39727823 - L2 LINE L2 0 3272 3163 1684 190 0 3 chr10 100589421 100589820 -39726945 - AluJb SINE Alu 0 398 1 255 340 107 0 chr10 100590193 100590296 -39726469 - MIR SINE MIR -62 146 33 186 167 0 0 chr10 100590499 100590535 -39726230 + (CTCA)n Simple_repeat Simple_repeat 4 39 0 392 81 0 16 chr10 100590826 100590888 -39725877 + (CA)n Simple_repeat Simple_repeat 2 62 0 1780 155 3 16 chr10 100591000 100591303 -39725462 + AluJo SINE Alu 1 299 -13 220 227 93 40 chr10 100592599 100592674 -39724091 + L2 LINE L2 3186 3264 -8 407 293 40 45 chr10 100592997 100593195 -39723570 - L2 LINE L2 0 3313 3117 420 37 0 0 chr10 100593465 100593519 -39723246 + (TG)n Simple_repeat Simple_repeat 2 55 0 1344 193 203 75 chr10 100593519 100593840 -39722925 - MSTD LTR MaLR -3 393 1 720 142 9 0 chr10 100593841 100593954 -39722811 - MSTD-int LTR MaLR -1 1734 1621 1426 183 161 45 chr10 100593958 100594313 -39722452 - MLT2B3 LTR ERVL -158 396 1 1389 179 61 11 chr10 100594313 100594592 -39722173 + AluJb SINE Alu 1 293 -19 387 0 0 0 chr10 100594605 100594648 -39722117 + (TG)n Simple_repeat Simple_repeat 1 43 0 26 30 0 0 chr10 100595682 100595715 -39721050 + AT_rich Low_complexity Low_complexity 1 33 0 1975 104 6 41 chr10 100595721 100596037 -39720728 - AluSg SINE Alu -5 305 1 2063 128 0 0 chr10 100596040 100596337 -39720428 - AluSx SINE Alu -12 300 4 267 233 258 17 chr10 100596363 100596483 -39720282 + MER117 DNA MER1_type 49 197 0 1631 211 31 65 chr10 100596768 100597247 -39719518 + MLT1D LTR MaLR 43 505 0 854 286 0 13 chr10 100597295 100597519 -39719246 - MIR SINE MIR -33 229 9 219 114 0 0 chr10 100598370 100598405 -39718360 + (TAA)n Simple_repeat Simple_repeat 1 35 0 641 246 24 24 chr10 100598406 100598573 -39718192 - MIR SINE MIR -8 254 88 203 280 183 0 chr10 100599232 100599325 -39717440 - MIR SINE MIR -141 121 12 2142 192 81 6 chr10 100599555 100600023 -39716742 - L1MC4a LINE L1 -3 7805 7303 1811 122 25 7 chr10 100600032 100600356 -39716409 - AluSx SINE Alu 0 329 1 1620 171 3 26 chr10 100601105 100601410 -39715355 - AluJo SINE Alu -14 298 1 1564 161 0 71 chr10 100601981 100602367 -39714398 - AluJb SINE Alu 0 362 1 23 0 0 0 chr10 100602536 100602559 -39714206 + AT_rich Low_complexity Low_complexity 1 23 0 445 282 35 0 chr10 100602714 100602888 -39713877 - L1ME3A LINE L1 -220 5950 5771 850 149 0 0 chr10 100602891 100603025 -39713740 + FAM SINE Alu 2 135 -50 441 219 0 88 chr10 100603033 100603147 -39713618 - L1MC4 LINE L1 -1341 6701 6598 198 118 0 0 chr10 100603329 100603363 -39713402 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 439 236 49 62 chr10 100603836 100603980 -39712785 - L2 LINE L2 -5 3308 3167 546 301 187 5 chr10 100603997 100604216 -39712549 + MIR SINE MIR 4 262 0 845 204 104 0 chr10 100604411 100604612 -39712153 + MER58A DNA MER1_type 1 222 -2 630 266 210 0 chr10 100605554 100605768 -39710997 - MIR SINE MIR -3 259 1 1711 159 7 3 chr10 100605925 100606215 -39710550 + AluJb SINE Alu 11 301 -11 506 136 49 0 chr10 100606344 100606425 -39710340 - MER53 DNA DNA 0 189 105 1493 254 113 7 chr10 100606564 100607005 -39709760 + LTR16C LTR ERVL 2 489 -2 407 228 7 132 chr10 100607170 100607284 -39709481 + MIR SINE MIR 3 92 -131 926 130 0 0 chr10 100607284 100607415 -39709350 - FLAM_C SINE Alu 0 133 3 407 228 7 132 chr10 100607415 100607475 -39709290 + MIR SINE MIR 92 158 -65 971 254 48 12 chr10 100607673 100607921 -39708844 - MIR SINE MIR 0 262 6 814 159 23 0 chr10 100608601 100608733 -39708032 + AluJo SINE Alu 2 136 -176 33 25 0 0 chr10 100608733 100608773 -39707992 + AT_rich Low_complexity Low_complexity 1 40 0 1268 167 19 28 chr10 100609980 100610196 -39706569 + MER20 DNA MER1_type 1 214 -5 196 281 104 10 chr10 100611631 100611727 -39705038 + L2 LINE L2 3125 3229 -43 319 232 32 72 chr10 100612342 100612467 -39704298 - MIR3 SINE MIR -36 172 53 621 150 10 0 chr10 100612487 100612587 -39704178 - 5S rRNA rRNA -20 101 1 362 254 96 23 chr10 100612741 100612896 -39703869 - MIR SINE MIR -12 250 89 265 258 227 31 chr10 100613165 100613262 -39703503 + MIR SINE MIR 7 122 -140 201 74 0 0 chr10 100613346 100613373 -39703392 + (T)n Simple_repeat Simple_repeat 1 27 0 616 51 0 0 chr10 100613653 100613732 -39703033 - L1PA6 LINE L1 -5 6149 6071 227 359 120 26 chr10 100615439 100615556 -39701209 + L2 LINE L2 3126 3253 -19 1101 272 96 29 chr10 100616402 100617136 -39699629 + L2 LINE L2 2481 3267 -46 509 263 51 28 chr10 100617911 100618128 -39698637 + MIR SINE MIR 8 229 -33 202 179 0 0 chr10 100618096 100618135 -39698630 + L2 LINE L2 3202 3240 -32 * 685 131 11 125 chr10 100618569 100618664 -39698101 - L1MA10 LINE L1 -4 6176 6072 2441 99 0 0 chr10 100618664 100618976 -39697789 + AluSx SINE Alu 1 312 0 297 0 0 0 chr10 100618979 100619012 -39697753 + (TA)n Simple_repeat Simple_repeat 1 33 0 685 131 11 125 chr10 100619012 100619090 -39697675 - L1MA10 LINE L1 -110 6070 6050 400 125 68 0 chr10 100619093 100619181 -39697584 - LTR16C LTR ERVL -30 461 368 358 253 0 11 chr10 100619194 100619281 -39697484 - LTR16C LTR ERVL -234 257 172 377 237 79 52 chr10 100619767 100619958 -39696807 + MIR SINE MIR 17 212 -50 2288 84 7 0 chr10 100620197 100620481 -39696284 + AluSc SINE Alu 1 286 -23 695 238 99 5 chr10 100621467 100621669 -39695096 + MIR SINE MIR 13 233 -29 242 277 143 17 chr10 100621702 100621821 -39694944 - MIR3 SINE MIR -60 148 15 204 273 0 0 chr10 100621947 100621991 -39694774 + C-rich Low_complexity Low_complexity 4 47 0 596 264 141 0 chr10 100622493 100622720 -39694045 - MIR SINE MIR -2 260 2 361 284 79 16 chr10 100623329 100623456 -39693309 - MIR3 SINE MIR -32 176 42 495 248 181 92 chr10 100624019 100624422 -39692343 - MLT1G1 LTR MaLR -1 594 110 252 325 161 17 chr10 100624521 100624719 -39692046 - MIR SINE MIR -12 250 27 2347 96 0 0 chr10 100625857 100626159 -39690606 - AluSg1 SINE Alu -7 302 1 721 179 179 17 chr10 100626528 100626707 -39690058 - MER3 DNA MER1_type 0 209 2 2204 119 0 0 chr10 100626805 100627099 -39689666 + AluSg SINE Alu 1 294 -16 1535 172 46 66 chr10 100627465 100627767 -39688998 + AluJo SINE Alu 1 296 -16 1689 132 45 17 chr10 100628050 100628207 -39688558 + L1MB5 LINE L1 5872 6042 -132 2946 74 62 7 chr10 100628207 100628251 -39688514 - MLT2A1 LTR ERVL 0 444 404 360 0 0 0 chr10 100628251 100628291 -39688474 + (TG)n Simple_repeat Simple_repeat 2 41 0 2946 74 62 7 chr10 100628291 100628667 -39688098 - MLT2A1 LTR ERVL -40 404 1 1689 132 45 17 chr10 100628667 100628796 -39687969 + L1MB5 LINE L1 6042 6166 -8 283 167 17 17 chr10 100629264 100629324 -39687441 - MER5A DNA MER1_type -121 68 9 2171 100 7 7 chr10 100629780 100630070 -39686695 + AluSc SINE Alu 1 290 -19 348 295 81 40 chr10 100630357 100630464 -39686301 + MIR SINE MIR 6 122 -140 2342 117 0 0 chr10 100630464 100630771 -39685994 - AluSx SINE Alu -5 307 1 348 295 81 40 chr10 100630771 100630812 -39685953 + MIR SINE MIR 122 160 -102 248 250 0 0 chr10 100631472 100631532 -39685233 - MIR3 SINE MIR -14 194 135 499 234 32 26 chr10 100631613 100631767 -39684998 - MIR SINE MIR -13 249 95 238 320 160 44 chr10 100632496 100632996 -39683769 + L2 LINE L2 2189 2746 -568 517 292 39 105 chr10 100633120 100633483 -39683282 + L2 LINE L2 2934 3272 0 1976 146 0 40 chr10 100633604 100633927 -39682838 + AluJb SINE Alu 1 310 -2 299 122 0 0 chr10 100634564 100634605 -39682160 + (GA)n Simple_repeat Simple_repeat 1 41 0 454 586 0 6 chr10 100634605 100634786 -39681979 + polypurine Low_complexity Low_complexity 1 180 0 2890 147 20 46 chr10 100635544 100636083 -39680682 - MER74A LTR ERVL 0 558 34 467 279 0 14 chr10 100636120 100636260 -39680505 - MER5B DNA MER1_type -38 140 3 180 326 113 28 chr10 100636995 100637136 -39679629 - MIR3 SINE MIR -25 183 31 1308 164 85 42 chr10 100637502 100637832 -39678933 - MER2 DNA MER2_type 0 344 1 838 286 133 27 chr10 100638635 100639048 -39677717 + Tigger8 DNA MER2_type 192 648 -18 2257 109 0 3 chr10 100639354 100639657 -39677108 - AluSq SINE Alu -11 302 1 4112 59 102 0 chr10 100640305 100640846 -39675919 - LTR66 LTR ERVL 0 610 15 1963 136 7 26 chr10 100641554 100641863 -39674902 - AluJb SINE Alu -9 303 1 340 203 0 0 chr10 100642337 100642401 -39674364 + L2 LINE L2 3247 3310 -3 252 233 23 58 chr10 100642808 100642894 -39673871 - L2 LINE L2 -2 3270 3188 435 376 69 12 chr10 100643037 100643372 -39673393 - L2 LINE L2 -1 3271 2918 522 241 60 0 chr10 100643800 100643933 -39672832 + MIR SINE MIR 91 231 -31 183 222 19 157 chr10 100643971 100644079 -39672686 - L2 LINE L2 -565 2749 2657 259 247 144 41 chr10 100644318 100644415 -39672350 - L2 LINE L2 -15 3298 3192 180 179 0 0 chr10 100645132 100645171 -39671594 + (CGG)n Simple_repeat Simple_repeat 2 40 0 225 119 0 0 chr10 100645215 100645257 -39671508 + (CGG)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr10 100645352 100645372 -39671393 + (CTG)n Simple_repeat Simple_repeat 3 22 0 30 0 0 0 chr10 100645408 100645438 -39671327 + GC_rich Low_complexity Low_complexity 1 30 0 1925 139 13 23 chr10 100647310 100647612 -39669153 - AluSx SINE Alu -13 299 1 2189 112 0 0 chr10 100648070 100648386 -39668379 - AluSq SINE Alu 0 316 1 631 234 84 33 chr10 100648387 100648601 -39668164 - MIR SINE MIR -35 227 3 489 250 128 0 chr10 100648752 100648908 -39667857 + MER45A DNA AcHobo 2 177 -1 2277 112 3 3 chr10 100649027 100649340 -39667425 - AluSp SINE Alu 0 313 1 275 274 142 9 chr10 100649714 100649827 -39666938 - MIR3 SINE MIR -7 201 74 192 253 115 11 chr10 100650015 100650102 -39666663 + L2 LINE L2 3218 3313 0 445 231 30 59 chr10 100651212 100651381 -39665384 + MIR SINE MIR 80 243 -19 2372 60 0 4 chr10 100651572 100651853 -39664912 + AluY SINE Alu 1 280 -31 180 0 0 0 chr10 100651853 100651873 -39664892 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 100652240 100652268 -39664497 + AT_rich Low_complexity Low_complexity 1 28 0 2038 136 0 7 chr10 100653050 100653344 -39663421 - AluSx SINE Alu -20 292 1 494 303 46 17 chr10 100653347 100653522 -39663243 + MER117 DNA MER1_type 12 191 -6 180 413 65 0 chr10 100653783 100653875 -39662890 + L2 LINE L2 3136 3233 -39 277 269 146 23 chr10 100654315 100654445 -39662320 + L2 LINE L2 3168 3313 0 881 164 153 5 chr10 100655551 100655740 -39661025 - MER20 DNA MER1_type -1 218 2 21 71 0 0 chr10 100655828 100655870 -39660895 + AT_rich Low_complexity Low_complexity 1 42 0 6981 72 3 0 chr10 100657055 100658432 -39658333 - L1PA7 LINE L1 -1 6153 4772 215 283 195 26 chr10 100658832 100658945 -39657820 - MIR3 SINE MIR -36 172 41 2312 71 41 7 chr10 100659322 100659617 -39657148 + AluY SINE Alu 1 305 -6 493 333 58 4 chr10 100659731 100659956 -39656809 + MIR SINE MIR 21 257 -5 675 277 72 108 chr10 100660581 100661098 -39655667 - HAL1 LINE L1 -1864 643 154 1970 97 43 21 chr10 100661098 100661377 -39655388 + AluSq SINE Alu 1 285 -28 675 277 72 108 chr10 100661377 100661526 -39655239 - HAL1 LINE L1 -2353 154 1 255 328 33 8 chr10 100661543 100661665 -39655100 - L3 LINE CR1 -773 804 680 259 246 100 27 chr10 100661773 100661883 -39654882 - L1ME4a LINE L1 -103 6018 5901 252 263 0 0 chr10 100661893 100661950 -39654815 - L2 LINE L2 -5 3308 3252 566 234 96 68 chr10 100661971 100662099 -39654666 - L1ME4a LINE L1 -215 5906 5783 2123 87 49 17 chr10 100662099 100662386 -39654379 - AluSc SINE Alu -13 296 1 566 234 96 68 chr10 100662386 100662611 -39654154 - L1ME4a LINE L1 -338 5783 5543 1649 161 68 4 chr10 100662953 100663233 -39653532 - AluJb SINE Alu -14 298 1 191 295 0 51 chr10 100663287 100663365 -39653400 - MIR SINE MIR -131 131 58 340 315 129 36 chr10 100663422 100663701 -39653064 - L3 LINE CR1 -1113 464 160 184 292 14 28 chr10 100664579 100664651 -39652114 - L2 LINE L2 -304 2968 2898 2438 80 3 3 chr10 100664753 100665053 -39651712 + AluSq SINE Alu 1 300 -13 1101 217 12 51 chr10 100667879 100668132 -39648633 - AluJo SINE Alu -63 249 7 2067 123 0 20 chr10 100668460 100668761 -39648004 + AluSx SINE Alu 1 295 -17 1606 160 71 11 chr10 100668787 100669069 -39647696 + AluJo SINE Alu 7 305 -7 30 27 0 0 chr10 100669146 100669183 -39647582 + AT_rich Low_complexity Low_complexity 1 37 0 307 316 11 32 chr10 100669546 100669641 -39647124 + MIR3 SINE MIR 3 95 -113 1160 138 67 5 chr10 100669690 100669900 -39646865 - MSTA LTR MaLR -1 427 205 180 0 0 0 chr10 100669901 100669921 -39646844 + (A)n Simple_repeat Simple_repeat 1 20 0 231 103 0 0 chr10 100671439 100671478 -39645287 + (CAT)n Simple_repeat Simple_repeat 3 41 0 272 246 66 0 chr10 100672521 100672582 -39644183 - L2 LINE L2 -4 3268 3204 2253 96 0 13 chr10 100673477 100673778 -39642987 - AluSx SINE Alu -15 297 1 3174 255 163 25 chr10 100674080 100675631 -39641134 - L2 LINE L2 0 3313 1541 482 325 121 0 chr10 100675635 100675841 -39640924 + MIR SINE MIR 7 237 -25 327 295 53 0 chr10 100677929 100678024 -39638741 - MIR SINE MIR -14 248 149 268 250 202 24 chr10 100678602 100678726 -39638039 - MIR SINE MIR -6 256 111 560 250 190 5 chr10 100679280 100679496 -39637269 - MER46C DNA MER2_type -1 337 82 1526 177 16 0 chr10 100679713 100679967 -39636798 - AluJo SINE Alu -54 258 1 363 305 35 50 chr10 100681798 100681939 -39634826 + L2 LINE L2 3134 3272 0 24 0 0 0 chr10 100682300 100682324 -39634441 + AT_rich Low_complexity Low_complexity 1 24 0 584 276 47 70 chr10 100682552 100682766 -39633999 - MIR SINE MIR -47 215 7 2150 145 0 0 chr10 100683310 100683621 -39633144 - AluSx SINE Alu -1 311 1 1690 112 50 8 chr10 100684302 100684560 -39632205 - AluSx SINE Alu -13 299 31 288 0 0 0 chr10 100686213 100686245 -39630520 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 2194 106 3 0 chr10 100686245 100686529 -39630236 - AluSq SINE Alu -28 285 1 22 35 0 0 chr10 100687206 100687235 -39629530 + AT_rich Low_complexity Low_complexity 1 29 0 241 350 25 25 chr10 100687639 100687759 -39629006 - MIR3 SINE MIR -81 127 8 2358 74 0 14 chr10 100688499 100688795 -39627970 + AluY SINE Alu 1 292 -19 699 159 24 0 chr10 100688961 100689087 -39627678 - FLAM_C SINE Alu -4 129 1 555 303 53 29 chr10 100692202 100692410 -39624355 + MIR SINE MIR 2 214 -48 2007 116 3 40 chr10 100692556 100692859 -39623906 - AluSq SINE Alu -21 292 1 457 211 230 19 chr10 100693132 100693293 -39623472 - MIR SINE MIR -33 229 35 240 86 0 0 chr10 100693445 100693480 -39623285 + (TG)n Simple_repeat Simple_repeat 2 36 0 1904 166 37 0 chr10 100694034 100694330 -39622435 + AluJb SINE Alu 1 307 -5 1853 128 83 7 chr10 100694729 100695017 -39621748 + AluSx SINE Alu 3 312 0 206 271 29 43 chr10 100695988 100696058 -39620707 + MIR3 SINE MIR 91 159 -49 1313 202 113 29 chr10 100696260 100696676 -39620089 - MLT1C LTR MaLR -1 466 16 251 366 86 11 chr10 100697000 100697093 -39619672 + MIR3 SINE MIR 3 102 -106 2002 129 26 17 chr10 100697312 100697660 -39619105 + THE1B LTR MaLR 14 364 0 204 40 0 0 chr10 100697771 100697796 -39618969 + (TA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 100697803 100697824 -39618941 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2018 103 3 45 chr10 100697824 100698116 -39618649 - AluSx SINE Alu -29 283 1 397 311 45 67 chr10 100698139 100698396 -39618369 + L1ME4a LINE L1 5667 5918 -203 435 68 0 0 chr10 100698412 100698471 -39618294 + (CA)n Simple_repeat Simple_repeat 2 60 0 198 0 0 0 chr10 100698587 100698609 -39618156 + (T)n Simple_repeat Simple_repeat 1 22 0 1096 86 7 0 chr10 100698907 100699047 -39617718 - AluJb SINE Alu -15 297 157 662 241 0 0 chr10 100699147 100699284 -39617481 - MIR SINE MIR -13 249 113 1415 276 89 3 chr10 100699940 100700512 -39616253 + L1ME3A LINE L1 5545 6165 -5 186 285 87 81 chr10 100701284 100701642 -39615123 + L2 LINE L2 2818 3177 -95 547 240 20 75 chr10 100702488 100702688 -39614077 + MLT1I LTR MaLR 157 345 -64 1524 150 75 26 chr10 100702702 100702968 -39613797 - AluJo SINE Alu -17 295 17 2415 58 0 3 chr10 100703530 100703823 -39612942 + AluY SINE Alu 1 292 -19 21 0 0 0 chr10 100703918 100703939 -39612826 + AT_rich Low_complexity Low_complexity 1 21 0 216 342 0 0 chr10 100704113 100704177 -39612588 - MIR SINE MIR -103 105 49 24 32 0 0 chr10 100704295 100704326 -39612439 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr10 100704710 100704751 -39612014 + AT_rich Low_complexity Low_complexity 1 41 0 406 256 23 12 chr10 100705102 100705188 -39611577 + MER5B DNA MER1_type 1 87 -91 2201 102 10 26 chr10 100705484 100705789 -39610976 + AluSx SINE Alu 1 300 -12 2348 77 47 0 chr10 100706101 100706399 -39610366 + AluSq SINE Alu 1 312 -1 318 306 43 89 chr10 100706901 100707136 -39609629 + L3 LINE CR1 596 819 -758 265 266 91 70 chr10 100707133 100707276 -39609489 - MIR SINE MIR 0 262 117 * 526 276 35 94 chr10 100707446 100707786 -39608979 - L1ME1 LINE L1 -7 6159 5840 447 134 0 0 chr10 100707797 100707864 -39608901 - AluSx SINE Alu -20 291 225 772 120 0 0 chr10 100707868 100707976 -39608789 - AluSq/x SINE Alu -205 108 1 3222 200 71 26 chr10 100707976 100709396 -39607369 - L1ME1 LINE L1 -322 5844 4361 1704 92 5 0 chr10 100709396 100709614 -39607151 - AluSx SINE Alu -93 219 1 3222 200 71 26 chr10 100709614 100709625 -39607140 - L1ME1 LINE L1 -1805 4361 4352 1965 144 42 9 chr10 100709652 100709986 -39606779 - MER7A DNA MER2_type 0 346 4 1666 129 97 74 chr10 100709991 100710206 -39606559 - Tigger2a DNA MER2_type -2274 434 204 1070 166 12 0 chr10 100710206 100710375 -39606390 + FAM SINE Alu 1 171 -4 1666 129 97 74 chr10 100710375 100710563 -39606202 - Tigger2a DNA MER2_type -2504 204 22 313 198 37 12 chr10 100710574 100710655 -39606110 - L1ME1 LINE L1 -1799 4347 4265 1476 241 44 22 chr10 100710791 100711288 -39605477 - L1ME1 LINE L1 -1943 4203 3696 424 316 34 23 chr10 100713427 100713604 -39603161 + MIR SINE MIR 3 181 -81 745 234 0 23 chr10 100714397 100714572 -39602193 + MER58A DNA MER1_type 22 192 -32 2370 106 0 0 chr10 100714925 100715236 -39601529 - AluY SINE Alu 0 311 1 445 325 31 38 chr10 100715471 100715631 -39601134 + MIR3 SINE MIR 43 201 -7 279 365 104 0 chr10 100715647 100715762 -39601003 - L2 LINE L2 -1 3271 3145 184 282 77 13 chr10 100715865 100715943 -39600822 - L2 LINE L2 -190 3082 3000 191 36 0 0 chr10 100715991 100716019 -39600746 + L2 LINE L2 3245 3272 0 376 241 188 9 chr10 100717241 100717353 -39599412 - MER20B DNA MER1_type -616 167 36 21 0 0 0 chr10 100717503 100717524 -39599241 + AT_rich Low_complexity Low_complexity 1 21 0 255 304 106 68 chr10 100718176 100718383 -39598382 + L2 LINE L2 2653 2867 -447 23 33 0 0 chr10 100718591 100718621 -39598144 + AT_rich Low_complexity Low_complexity 1 30 0 320 201 8 16 chr10 100720242 100720311 -39596454 - FRAM/FAM SINE Alu -125 50 1 241 333 123 15 chr10 100720660 100720864 -39595901 + MIR SINE MIR 1 226 -36 543 238 144 15 chr10 100720911 100721113 -39595652 + MIR SINE MIR 20 247 -15 659 220 85 45 chr10 100722956 100723788 -39592977 - L1MC5 LINE L1 -30 7931 7018 240 96 500 0 chr10 100723984 100724036 -39592729 + MADE1 DNA Mariner 2 79 -1 399 234 47 39 chr10 100724063 100724191 -39592574 - L2 LINE L2 0 3313 3185 207 100 0 0 chr10 100727339 100727369 -39589396 + (TG)n Simple_repeat Simple_repeat 2 31 0 888 196 98 5 chr10 100729149 100729333 -39587432 - MER58A DNA MER1_type 0 224 24 239 266 0 0 chr10 100733187 100733251 -39583514 + (CCG)n Simple_repeat Simple_repeat 1 64 0 204 186 68 0 chr10 100736145 100736204 -39580561 + MIR SINE MIR 82 144 -64 470 165 12 0 chr10 100736471 100736556 -39580209 + MIR SINE MIR 65 150 -112 492 275 0 42 chr10 100737004 100737146 -39579619 + MIR SINE MIR 37 172 -90 2445 46 0 0 chr10 100737161 100737481 -39579284 - AluY SINE Alu 0 320 1 735 287 102 35 chr10 100737488 100737779 -39578986 - LTR16C LTR ERVL -1 490 167 1650 254 83 35 chr10 100737779 100738347 -39578418 - MLT1G1 LTR MaLR 0 595 1 735 287 102 35 chr10 100738347 100738428 -39578337 - LTR16C LTR ERVL -324 167 93 605 236 83 46 chr10 100739342 100739574 -39577191 + MIR SINE MIR 3 247 -15 323 42 104 0 chr10 100739759 100739807 -39576958 + L1MB7 LINE L1 6129 6181 -3 2299 123 0 0 chr10 100740865 100741175 -39575590 - AluSg SINE Alu 0 310 1 309 299 158 0 chr10 100741176 100741340 -39575425 + MIR SINE MIR 62 251 -11 626 278 72 14 chr10 100741462 100741685 -39575080 + MIR SINE MIR 21 256 -6 1776 134 63 79 chr10 100741761 100742097 -39574668 + THE1C LTR MaLR 1 333 -42 2165 71 18 25 chr10 100742097 100742422 -39574343 - AluY SINE Alu 0 323 1 1776 134 63 79 chr10 100742422 100742464 -39574301 + THE1C LTR MaLR 333 374 -1 1697 157 0 0 chr10 100742570 100742819 -39573946 - AluSx SINE Alu -63 249 1 500 269 29 23 chr10 100743653 100743824 -39572941 + MIR SINE MIR 49 220 -42 500 287 108 69 chr10 100744556 100745310 -39571455 + L2 LINE L2 2425 3267 -5 236 279 108 70 chr10 100745328 100745486 -39571279 - L2 LINE L2 -176 3096 2933 563 284 80 53 chr10 100745936 100746313 -39570452 - L1ME4a LINE L1 -3 6118 5732 250 111 0 22 chr10 100746323 100746368 -39570397 + (TCCC)n Simple_repeat Simple_repeat 4 47 0 1497 167 32 0 chr10 100746370 100746622 -39570143 - AluJb SINE Alu -39 273 14 520 275 7 0 chr10 100746634 100746772 -39569993 - L1ME4a LINE L1 -394 5727 5589 1602 149 6 110 chr10 100746812 100747147 -39569618 - AluJb SINE Alu -1 301 2 745 205 97 48 chr10 100747615 100747916 -39568849 - LTR41 LTR ERVL 0 766 453 780 242 0 28 chr10 100747994 100748176 -39568589 - LTR41 LTR ERVL -590 183 7 1257 224 68 57 chr10 100748179 100748635 -39568130 - MLT1J LTR MaLR -50 461 1 446 337 18 0 chr10 100748751 100748914 -39567851 - MIR3 SINE MIR -14 194 29 326 243 155 17 chr10 100749334 100749515 -39567250 - LTR33 LTR ERVL -2 519 314 366 278 56 37 chr10 100749580 100749742 -39567023 - LTR33 LTR ERVL -321 200 36 1988 131 26 30 chr10 100749843 100750148 -39566617 - AluSx SINE Alu -8 304 1 403 209 155 8 chr10 100750221 100750350 -39566415 - MER117 DNA MER1_type -40 157 10 567 275 26 26 chr10 100750831 100751024 -39565741 + MER117 DNA MER1_type 5 197 0 325 313 10 0 chr10 100751065 100751163 -39565602 + MIR3 SINE MIR 77 176 -32 436 297 5 69 chr10 100752160 100752362 -39564403 - MER5A DNA MER1_type 0 189 1 199 291 77 17 chr10 100753153 100753270 -39563495 + MIR SINE MIR 22 145 -117 204 238 57 48 chr10 100753926 100754031 -39562734 + MIR SINE MIR 87 192 -70 194 312 8 80 chr10 100754130 100754255 -39562510 + L3 LINE CR1 1458 1573 -4 355 269 104 15 chr10 100754344 100754478 -39562287 - MER103 DNA DNA -20 146 1 2334 97 0 0 chr10 100754505 100754804 -39561961 - AluSq SINE Alu -13 300 2 180 302 39 73 chr10 100754858 100755037 -39561728 + MIR SINE MIR 69 241 -21 677 214 154 0 chr10 100755256 100755438 -39561327 - MER63A DNA MER1_type 0 210 1 2392 108 0 3 chr10 100755734 100756048 -39560717 - AluSq SINE Alu 0 313 1 518 258 124 5 chr10 100756217 100756380 -39560385 - MER5A DNA MER1_type 0 189 5 25 31 0 0 chr10 100756518 100756550 -39560215 + AT_rich Low_complexity Low_complexity 1 32 0 311 299 121 30 chr10 100756801 100757021 -39559744 - L1M4 LINE L1 -1501 4645 4396 2341 90 3 16 chr10 100757021 100757332 -39559433 - AluSx SINE Alu -5 307 1 311 299 121 30 chr10 100757332 100757375 -39559390 - L1M4 LINE L1 -1750 4396 4358 775 143 16 0 chr10 100757445 100757571 -39559194 - MER3 DNA MER1_type -24 185 58 1726 164 10 10 chr10 100757589 100757900 -39558865 - AluJb SINE Alu -1 311 1 294 253 48 0 chr10 100758016 100758099 -39558666 - MER117 DNA MER1_type 0 197 111 226 311 0 16 chr10 100758355 100758425 -39558340 + MIR SINE MIR 47 105 -103 464 268 36 24 chr10 100758996 100759164 -39557601 - MIR SINE MIR -33 229 60 309 278 46 9 chr10 100759352 100759460 -39557305 + MIR SINE MIR 30 141 -67 208 254 36 0 chr10 100759554 100759609 -39557156 + C-rich Low_complexity Low_complexity 5 61 0 626 311 48 4 chr10 100759871 100760099 -39556666 - MIR SINE MIR -7 255 18 424 300 134 9 chr10 100760511 100760734 -39556031 + Charlie2a DNA MER1_type 196 446 -2336 1030 208 77 4 chr10 100760734 100760994 -39555771 + Charlie2a DNA MER1_type 728 1006 -1856 380 259 83 0 chr10 100760995 100761103 -39555662 + Charlie2a DNA MER1_type 2745 2861 -1 1808 177 34 25 chr10 100761497 100762068 -39554697 - L1M4 LINE L1 -671 5503 4936 360 0 0 0 chr10 100762516 100762556 -39554209 + (TG)n Simple_repeat Simple_repeat 2 41 0 230 323 65 24 chr10 100762558 100762682 -39554083 - MIR SINE MIR -57 205 77 938 280 105 35 chr10 100762715 100763003 -39553762 - MLT1I LTR MaLR 0 409 88 2111 121 3 7 chr10 100763003 100763309 -39553456 + AluSx SINE Alu 1 305 -7 938 280 105 35 chr10 100763309 100763391 -39553374 - MLT1I LTR MaLR -321 88 13 1982 125 17 3 chr10 100763578 100763873 -39552892 + AluSc SINE Alu 7 305 -4 818 179 0 0 chr10 100763888 100764011 -39552754 + FLAM_C SINE Alu 3 125 -18 461 204 62 18 chr10 100764122 100764235 -39552530 + L1M4 LINE L1 4532 4649 -1497 888 141 0 0 chr10 100764304 100764425 -39552340 + AluJb SINE Alu 171 291 -21 547 79 0 0 chr10 100764429 100764505 -39552260 + L1PA15 LINE L1 6085 6160 -5 2299 182 24 58 chr10 100764505 100764777 -39551988 + L1M4 LINE L1 5037 5317 -867 2484 60 3 3 chr10 100764777 100765075 -39551690 - AluY SINE Alu -13 298 1 2299 182 24 58 chr10 100765075 100765344 -39551421 + L1M4 LINE L1 5317 5564 -620 1663 169 0 44 chr10 100765344 100765668 -39551097 + AluJb SINE Alu 1 311 0 2299 182 24 58 chr10 100765668 100765852 -39550913 + L1M4 LINE L1 5564 5753 -431 345 183 0 0 chr10 100766027 100766098 -39550667 - MER58 DNA MER1_type -36 2384 2314 260 271 0 0 chr10 100766101 100766160 -39550605 - MER58 DNA MER1_type -2322 98 40 1101 190 219 8 chr10 100766162 100766409 -39550356 + AluJb SINE Alu 1 299 -3 930 215 64 13 chr10 100766467 100766765 -39550000 - L1MEc LINE L1 -4121 2275 1963 1806 142 0 4 chr10 100766766 100767033 -39549732 + AluSx SINE Alu 1 266 -46 305 288 97 59 chr10 100767906 100768194 -39548571 + LTR16C LTR ERVL 193 491 0 1925 152 7 3 chr10 100768545 100768834 -39547931 - AluJo SINE Alu -20 292 3 2011 133 0 11 chr10 100768891 100769217 -39547548 + AluSx SINE Alu 1 323 0 907 164 7 161 chr10 100769449 100769653 -39547112 + L1MD3 LINE L1 7730 7875 -120 2185 87 25 11 chr10 100769653 100769939 -39546826 + AluSx SINE Alu 1 290 -22 907 164 7 161 chr10 100769939 100770033 -39546732 + L1MD3 LINE L1 7875 7982 -13 509 152 0 22 chr10 100770035 100770127 -39546638 - AluSg/x SINE Alu -5 305 216 372 131 0 11 chr10 100770227 100770304 -39546461 - AluS SINE Alu -249 59 13 2259 125 3 0 chr10 100770326 100770637 -39546128 + AluSx SINE Alu 1 312 0 458 296 46 20 chr10 100770649 100770845 -39545920 + MIR SINE MIR 45 245 -17 2073 126 10 7 chr10 100771638 100771932 -39544833 + AluSx SINE Alu 1 295 -17 306 73 0 0 chr10 100771932 100771973 -39544792 + (TA)n Simple_repeat Simple_repeat 2 42 0 331 313 74 45 chr10 100772138 100772381 -39544384 - L1M4 LINE L1 -1812 4334 4085 1704 164 29 0 chr10 100772666 100772940 -39543825 - AluJb SINE Alu -30 282 1 2206 114 0 7 chr10 100772963 100773260 -39543505 - AluSg1 SINE Alu -14 295 1 1578 175 22 51 chr10 100773824 100774138 -39542627 + AluJo SINE Alu 1 305 -7 276 100 0 0 chr10 100774138 100774178 -39542587 + (AGGGGG)n Simple_repeat Simple_repeat 6 45 0 * 752 160 0 33 chr10 100774171 100774352 -39542413 + GA-rich Low_complexity Low_complexity 4 178 0 200 94 0 31 chr10 100774353 100774385 -39542380 + (GAAA)n Simple_repeat Simple_repeat 4 34 0 1891 122 43 0 chr10 100775380 100775658 -39541107 + AluSg SINE Alu 1 290 -20 821 138 0 43 chr10 100775749 100775867 -39540898 + FLAM_C SINE Alu 1 114 -188 216 0 0 0 chr10 100775867 100775891 -39540874 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 821 138 0 43 chr10 100775891 100775910 -39540855 + FLAM_C SINE Alu 114 132 -170 227 243 0 14 chr10 100775914 100775988 -39540777 + A-rich Low_complexity Low_complexity 2 74 0 2382 104 0 0 chr10 100775990 100776298 -39540467 + AluSq SINE Alu 1 308 -5 680 182 0 7 chr10 100776302 100776445 -39540320 + GA-rich Low_complexity Low_complexity 3 144 0 189 150 0 25 chr10 100776663 100776703 -39540062 + MIR SINE MIR 109 147 -61 1282 110 12 0 chr10 100776976 100777149 -39539616 + AluSq SINE Alu 1 175 -138 569 78 11 11 chr10 100777557 100777647 -39539118 + MER41A LTR ERV1 433 522 -32 2334 41 51 20 chr10 100777710 100778005 -39538760 - AluY SINE Alu -7 304 1 1618 179 13 36 chr10 100778233 100778402 -39538363 - AluJb SINE Alu -11 301 130 246 32 0 0 chr10 100778402 100778433 -39538332 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2105 113 3 0 chr10 100778433 100778716 -39538049 - AluSq SINE Alu -29 284 1 1618 179 13 36 chr10 100778716 100778853 -39537912 - AluJb SINE Alu -180 132 1 1951 138 10 0 chr10 100778976 100779274 -39537491 + AluSx SINE Alu 1 301 -11 2366 101 0 7 chr10 100779274 100779582 -39537183 + AluSg SINE Alu 1 306 -4 996 112 8 0 chr10 100779583 100779717 -39537048 + MLT2A2 LTR ERVL 50 184 -269 1040 66 0 22 chr10 100779717 100779853 -39536912 + AluSg/x SINE Alu 170 302 -8 2430 4 90 4 chr10 100779905 100780182 -39536583 + AluYb8 SINE Alu 1 301 -17 525 186 0 0 chr10 100780747 100780833 -39535932 - AluJ/FLAM SINE Alu -225 87 2 231 137 0 55 chr10 100780923 100780996 -39535769 + (TA)n Simple_repeat Simple_repeat 1 69 0 485 81 0 0 chr10 100780996 100781058 -39535707 - Alu SINE Alu -250 63 2 24 0 0 0 chr10 100781062 100781086 -39535679 + AT_rich Low_complexity Low_complexity 1 24 0 1193 140 5 31 chr10 100781165 100781358 -39535407 + AluSx SINE Alu 2 189 -123 285 149 43 0 chr10 100781540 100781587 -39535178 + AluSx SINE Alu 2 50 -252 564 249 40 43 chr10 100781606 100781859 -39534906 + L1ME4a LINE L1 5610 5861 -260 283 242 42 42 chr10 100781864 100781905 -39534860 + AluY SINE Alu 1 41 -259 2706 59 6 0 chr10 100781905 100782242 -39534523 - LTR14A LTR ERVK 0 344 6 2084 93 7 4 chr10 100782242 100782511 -39534254 + AluSx SINE Alu 29 298 -14 1731 126 0 28 chr10 100782796 100783050 -39533715 + AluSx SINE Alu 35 281 -31 207 0 0 0 chr10 100783053 100783076 -39533689 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 665 327 27 11 chr10 100783163 100783423 -39533342 + L3 LINE CR1 1312 1575 -2 2199 128 0 0 chr10 100783461 100783759 -39533006 + AluSx SINE Alu 1 298 -14 612 141 0 0 chr10 100783787 100783879 -39532886 + AluSg/x SINE Alu 209 300 -12 27 0 0 0 chr10 100784300 100784327 -39532438 + AT_rich Low_complexity Low_complexity 1 27 0 732 171 19 63 chr10 100784779 100784855 -39531910 - MLT1A1 LTR MaLR -213 152 85 2213 194 26 75 chr10 100784855 100785438 -39531327 + MLT2B3 LTR ERVL 1 554 0 732 171 19 63 chr10 100785438 100785519 -39531246 - MLT1A1 LTR MaLR -280 85 2 24 0 0 0 chr10 100785527 100785551 -39531214 + AT_rich Low_complexity Low_complexity 1 24 0 816 174 0 7 chr10 100785551 100785689 -39531076 - AluJo SINE Alu -175 137 1 773 169 0 0 chr10 100785871 100785989 -39530776 - FLAM_C SINE Alu -15 118 1 351 280 0 10 chr10 100786078 100786178 -39530587 - L1MC/D LINE L1 -2116 5692 5594 2227 101 20 3 chr10 100786197 100786494 -39530271 + AluSx SINE Alu 1 302 -10 575 153 17 17 chr10 100786617 100786735 -39530030 - MIR SINE MIR -56 206 89 249 57 0 0 chr10 100787061 100787096 -39529669 + (TTAA)n Simple_repeat Simple_repeat 3 37 0 1919 139 4 0 chr10 100787097 100787377 -39529388 - AluSx SINE Alu -31 281 1 1728 156 35 7 chr10 100787380 100787663 -39529102 - AluJo SINE Alu -20 292 2 262 220 34 0 chr10 100787889 100787948 -39528817 + L1MC4 LINE L1 7452 7512 -530 2375 83 0 17 chr10 100787950 100788251 -39528514 + AluSp SINE Alu 1 296 -17 1788 118 0 33 chr10 100788349 100788619 -39528146 + AluSx SINE Alu 1 261 -51 419 203 138 0 chr10 100788662 100788785 -39527980 + L1MC4 LINE L1 7901 8040 -2 1407 167 24 95 chr10 100788816 100788982 -39527783 + L1MB8 LINE L1 5662 5838 -340 2101 141 3 0 chr10 100788982 100789281 -39527484 + AluSx SINE Alu 1 300 -12 1407 167 24 95 chr10 100789281 100789406 -39527359 + L1MB8 LINE L1 5838 5970 -208 1710 142 10 58 chr10 100789406 100789715 -39527050 + AluJb SINE Alu 1 294 -18 1407 167 24 95 chr10 100789715 100789786 -39526979 + L1MB8 LINE L1 5970 6045 -133 2700 48 0 0 chr10 100789786 100790097 -39526668 + AluY SINE Alu 1 311 0 1407 167 24 95 chr10 100790097 100790257 -39526508 + L1MB8 LINE L1 6045 6125 -53 1240 131 0 0 chr10 100790351 100790578 -39526187 + AluSg/x SINE Alu 137 363 0 395 115 0 0 chr10 100792285 100792346 -39524419 + L1MB8 LINE L1 6110 6170 -8 1946 140 10 10 chr10 100792455 100792747 -39524018 - AluSx SINE Alu -20 292 1 355 123 123 0 chr10 100792929 100792994 -39523771 - MIR SINE MIR -155 107 35 * 434 241 193 6 chr10 100792973 100793139 -39523626 + MIR SINE MIR 28 224 -38 556 269 93 0 chr10 100793531 100793747 -39523018 - MIR SINE MIR -24 238 3 202 325 100 0 chr10 100793814 100793894 -39522871 + L2 LINE L2 3168 3255 -17 245 29 29 0 chr10 100793978 100794012 -39522753 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 2203 96 0 3 chr10 100794014 100794296 -39522469 - AluSx SINE Alu -31 281 1 262 311 193 6 chr10 100794354 100794515 -39522250 + MIR SINE MIR 72 262 0 258 316 77 54 chr10 100794610 100794778 -39521987 + MIR3 SINE MIR 5 176 -32 264 247 25 12 chr10 100795607 100795688 -39521077 + CT-rich Low_complexity Low_complexity 3 84 0 21 0 0 0 chr10 100795921 100795942 -39520823 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 100796274 100796295 -39520470 + AT_rich Low_complexity Low_complexity 1 21 0 48 109 0 0 chr10 100796721 100796923 -39519842 + GC_rich Low_complexity Low_complexity 1 202 0 26 30 0 0 chr10 100797042 100797075 -39519690 + GC_rich Low_complexity Low_complexity 1 33 0 287 265 0 20 chr10 100797284 100797382 -39519383 + C-rich Low_complexity Low_complexity 1 96 0 21 0 0 0 chr10 100797509 100797530 -39519235 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 100797953 100797984 -39518781 + GC_rich Low_complexity Low_complexity 1 31 0 2342 89 0 10 chr10 100799516 100799829 -39516936 - AluSg SINE Alu 0 310 1 453 109 174 43 chr10 100800906 100800998 -39515767 - FLAM_C SINE Alu -4 139 36 2457 64 3 0 chr10 100801618 100801913 -39514852 - AluY SINE Alu -11 300 5 1868 101 8 8 chr10 100801925 100802182 -39514583 - AluSc SINE Alu -52 257 1 246 304 0 0 chr10 100802295 100802374 -39514391 - MARNA DNA Mariner -201 385 307 4020 157 50 81 chr10 100802818 100802917 -39513848 - L1MB7 LINE L1 -21 6163 6062 819 156 0 0 chr10 100802917 100803045 -39513720 - FLAM_C SINE Alu -1 132 5 4020 157 50 81 chr10 100803045 100803920 -39512845 - L1MB7 LINE L1 -122 6062 5215 298 139 0 0 chr10 100804049 100804092 -39512673 + Alu SINE Alu 2 44 -258 1826 152 17 7 chr10 100804308 100804605 -39512160 - AluSg SINE Alu -8 302 3 21 57 0 0 chr10 100805230 100805265 -39511500 + AT_rich Low_complexity Low_complexity 1 35 0 235 147 0 0 chr10 100805275 100805309 -39511456 - Alu SINE Alu -267 34 1 1846 161 0 20 chr10 100805485 100805784 -39510981 + AluJb SINE Alu 4 296 -16 2343 97 7 0 chr10 100805989 100806287 -39510478 - AluSx SINE Alu -12 300 1 215 31 31 0 chr10 100806376 100806408 -39510357 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 834 144 0 0 chr10 100806408 100806526 -39510239 - FLAM_C SINE Alu -25 118 1 782 246 110 61 chr10 100806903 100807359 -39509406 - HAL1b LINE L1 -172 1176 699 414 0 0 0 chr10 100807397 100807443 -39509322 + (TG)n Simple_repeat Simple_repeat 2 47 0 1467 109 0 5 chr10 100807443 100807644 -39509121 - AluSg/x SINE Alu -27 283 84 2222 116 7 0 chr10 100808467 100808761 -39508004 - AluSq SINE Alu -17 296 1 2246 84 39 0 chr10 100808928 100809213 -39507552 + AluY SINE Alu 1 296 -15 1905 161 0 13 chr10 100809405 100809710 -39507055 + AluJb SINE Alu 1 301 -11 1213 158 224 41 chr10 100809899 100810261 -39506504 - MSTC LTR MaLR 0 428 1 302 244 47 72 chr10 100810409 100810517 -39506248 + L1MC5 LINE L1 5269 5371 -2437 2314 79 3 20 chr10 100810517 100810820 -39505945 - AluSq SINE Alu -15 298 1 302 244 47 72 chr10 100810820 100810904 -39505861 + L1MC5 LINE L1 5371 5456 -2352 544 193 77 136 chr10 100810927 100811067 -39505698 + L1MC5 LINE L1 6852 6999 -962 1919 164 3 3 chr10 100811067 100811371 -39505394 + AluJb SINE Alu 1 304 -8 544 193 77 136 chr10 100811371 100811442 -39505323 + L1MC5 LINE L1 6999 7073 -888 2431 82 0 0 chr10 100811442 100811736 -39505029 - AluY SINE Alu -17 294 1 544 193 77 136 chr10 100811736 100811927 -39504838 + L1MC5 LINE L1 7073 7231 -730 1210 239 53 65 chr10 100811937 100812430 -39504335 - L2 LINE L2 -480 2834 2348 205 138 0 0 chr10 100812607 100812636 -39504129 + (TCCCC)n Simple_repeat Simple_repeat 4 32 0 1774 146 11 14 chr10 100812640 100812921 -39503844 - AluJb SINE Alu -32 280 1 501 291 92 35 chr10 100812954 100813181 -39503584 - MIR SINE MIR -21 241 2 2004 128 3 19 chr10 100813475 100813788 -39502977 - AluSx SINE Alu -4 308 1 225 0 0 0 chr10 100814218 100814243 -39502522 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1918 152 0 0 chr10 100814247 100814523 -39502242 - AluSx SINE Alu -36 276 1 635 178 123 0 chr10 100814703 100814849 -39501916 - MER105 DNA DNA -29 175 12 444 189 0 14 chr10 100814917 100814991 -39501774 + MER58 DNA MER1_type 2345 2417 -3 318 237 52 0 chr10 100815050 100815147 -39501618 + MIR SINE MIR 117 218 -44 2372 105 0 0 chr10 100815269 100815582 -39501183 - AluSq SINE Alu 0 313 1 1365 172 93 15 chr10 100815848 100816238 -39500527 - Charlie1 DNA MER1_type -1 2760 2269 5317 155 75 21 chr10 100816243 100816858 -39499907 - L1MC1 LINE L1 0 6333 5753 2112 124 17 0 chr10 100816858 100817157 -39499608 - AluSx SINE Alu -8 304 1 5317 155 75 21 chr10 100817157 100817649 -39499116 - L1MC1 LINE L1 -580 5753 5172 495 98 85 0 chr10 100817660 100817742 -39499023 - L1MA8 LINE L1 -6 6285 6197 743 163 75 27 chr10 100817919 100818066 -39498699 + Charlie1 DNA MER1_type 52 205 -2556 622 216 0 0 chr10 100818072 100818197 -39498568 + Charlie1 DNA MER1_type 2632 2756 -5 807 229 16 27 chr10 100818373 100818556 -39498209 - MER5A DNA MER1_type 0 189 9 248 267 209 53 chr10 100818561 100818767 -39497998 - L1MEd LINE L1 -5772 347 110 1712 153 6 49 chr10 100819195 100819521 -39497244 - AluJb SINE Alu 0 312 1 1899 120 66 0 chr10 100819729 100820003 -39496762 - AluSx SINE Alu -20 292 1 1173 134 159 0 chr10 100820100 100820301 -39496464 - MER46A DNA MER2_type 0 236 4 1115 246 49 7 chr10 100820827 100821111 -39495654 + Charlie1a DNA MER1_type 13 308 -1147 2625 30 14 0 chr10 100821111 100821407 -39495358 + AluYa5 SINE Alu 1 300 -11 1361 87 6 6 chr10 100821408 100821591 -39495174 + L1PB1 LINE L1 5968 6150 -1 2207 104 0 19 chr10 100821598 100821906 -39494859 + AluSx SINE Alu 1 302 -10 2446 80 3 13 chr10 100821911 100822225 -39494540 + AluSp SINE Alu 1 311 -2 400 189 110 47 chr10 100822250 100822377 -39494388 + L1M LINE L1 5290 5427 -742 24 53 0 0 chr10 100822377 100822415 -39494350 + AT_rich Low_complexity Low_complexity 1 38 0 1049 255 3 17 chr10 100822505 100822799 -39493966 + L1M4 LINE L1 3821 4110 -2036 2156 108 0 3 chr10 100822816 100823104 -39493661 - AluSx SINE Alu -24 288 2 25 31 0 0 chr10 100823146 100823178 -39493587 + AT_rich Low_complexity Low_complexity 1 32 0 2215 89 10 7 chr10 100823433 100823724 -39493041 + AluSq SINE Alu 1 292 -21 2297 112 3 0 chr10 100823945 100824249 -39492516 + AluSc SINE Alu 1 305 -4 814 179 0 0 chr10 100824264 100824387 -39492378 + FLAM_C SINE Alu 3 125 -18 463 204 62 18 chr10 100824498 100824611 -39492154 + L1M4 LINE L1 4532 4649 -1497 878 141 0 0 chr10 100824680 100824801 -39491964 + AluJb SINE Alu 171 291 -21 573 79 0 0 chr10 100824805 100824881 -39491884 + L1PA15 LINE L1 6085 6160 -5 1148 209 41 4 chr10 100824881 100825149 -39491616 + L1M4 LINE L1 5037 5314 -832 1684 77 5 0 chr10 100825156 100825365 -39491400 - AluY SINE Alu -18 293 84 1640 162 3 45 chr10 100825695 100826004 -39490761 + AluJb SINE Alu 1 296 -16 1554 176 21 18 chr10 100826067 100826346 -39490419 + AluJo SINE Alu 3 282 -30 1623 78 169 0 chr10 100827110 100827378 -39489387 + AluSg1 SINE Alu 1 309 0 191 300 133 0 chr10 100827390 100827450 -39489315 + MIR SINE MIR 15 82 -180 2253 120 0 0 chr10 100827550 100827858 -39488907 + AluSx SINE Alu 5 312 0 1811 170 0 26 chr10 100827906 100828212 -39488553 + AluSx SINE Alu 1 298 -14 2007 146 7 3 chr10 100828214 100828516 -39488249 + AluSx SINE Alu 1 303 -9 405 310 70 8 chr10 100828526 100828655 -39488110 - L2 LINE L2 0 3272 3136 2297 97 0 3 chr10 100828858 100829157 -39487608 + AluSg SINE Alu 12 309 -1 2326 90 3 0 chr10 100829237 100829536 -39487229 + AluSp SINE Alu 1 300 -13 186 143 0 0 chr10 100829815 100829850 -39486915 + (GGGAGA)n Simple_repeat Simple_repeat 6 40 0 229 241 13 13 chr10 100829961 100830040 -39486725 + L1ME2 LINE L1 4576 4654 -1492 714 150 42 67 chr10 100830112 100830232 -39486533 - FLAM_C SINE Alu -15 118 2 1661 209 0 0 chr10 100830243 100830530 -39486235 - AluJo SINE Alu -25 287 1 1944 116 7 20 chr10 100830554 100830847 -39485918 + AluSp SINE Alu 3 291 -22 1653 166 27 62 chr10 100830854 100830969 -39485796 + L1ME2 LINE L1 5472 5589 -575 2098 104 21 3 chr10 100830969 100831256 -39485509 + AluSq SINE Alu 1 292 -21 1653 166 27 62 chr10 100831256 100831514 -39485251 + L1ME2 LINE L1 5589 5832 -332 735 142 206 64 chr10 100831510 100831729 -39485036 + L1MB8 LINE L1 5929 6178 0 * 689 231 109 56 chr10 100831724 100831940 -39484825 + L1ME2 LINE L1 5814 6052 -112 * 2511 87 3 0 chr10 100831940 100832252 -39484513 - AluSq SINE Alu 0 313 1 689 231 109 56 chr10 100832252 100832338 -39484427 + L1ME2 LINE L1 6052 6132 -32 22 0 0 0 chr10 100832767 100832789 -39483976 + AT_rich Low_complexity Low_complexity 1 22 0 2087 154 62 0 chr10 100833019 100833344 -39483421 - MER7A DNA MER2_type -1 345 3 352 341 62 23 chr10 100833413 100833542 -39483223 + L2 LINE L2 3138 3271 -1 2324 113 0 0 chr10 100834463 100834773 -39481992 + AluSx SINE Alu 1 310 -2 2329 112 0 6 chr10 100834784 100835097 -39481668 + AluSq SINE Alu 1 311 -2 3646 194 56 39 chr10 100835130 100835401 -39481364 + MER21B LTR ERV1 1 266 -597 1769 174 27 0 chr10 100835401 100835699 -39481066 + AluJb SINE Alu 1 306 -6 3646 194 56 39 chr10 100835699 100836135 -39480630 + MER21B LTR ERV1 266 724 -139 1616 176 40 10 chr10 100836135 100836436 -39480329 + AluSg SINE Alu 1 310 0 3646 194 56 39 chr10 100836436 100836479 -39480286 + MER21B LTR ERV1 724 765 -98 1649 189 14 7 chr10 100836595 100836891 -39479874 + AluJo SINE Alu 6 303 -9 254 276 67 19 chr10 100837838 100837943 -39478822 + MIR3 SINE MIR 76 185 -23 2155 120 3 0 chr10 100838061 100838352 -39478413 - AluSx SINE Alu -20 292 1 1851 151 23 16 chr10 100838659 100838964 -39477801 - AluJo SINE Alu -3 309 3 2058 96 7 11 chr10 100839268 100839550 -39477215 + AluSq SINE Alu 1 281 -32 368 357 6 0 chr10 100839939 100840110 -39476655 + C-rich Low_complexity Low_complexity 2 173 0 265 261 135 18 chr10 100840221 100840332 -39476433 - L2 LINE L2 0 3272 3149 3522 145 56 40 chr10 100841007 100841600 -39475165 + MER7C DNA MER2_type 1 602 0 1135 165 0 10 chr10 100842435 100842629 -39474136 + AluJb SINE Alu 84 275 -37 215 224 17 0 chr10 100842632 100842690 -39474075 + GA-rich Low_complexity Low_complexity 2 60 0 658 176 42 92 chr10 100843113 100843215 -39473550 + FLAM_A SINE Alu 8 103 -208 2427 63 13 0 chr10 100843215 100843516 -39473249 - AluY SINE Alu -6 305 1 658 176 42 92 chr10 100843516 100843555 -39473210 + FLAM_A SINE Alu 103 142 -169 358 285 127 31 chr10 100843806 100844066 -39472699 - L1M4 LINE L1 -2836 3310 3026 1525 175 98 23 chr10 100844115 100844511 -39472254 + L1MB7 LINE L1 5743 6174 -10 21 82 0 0 chr10 100844906 100844955 -39471810 + AT_rich Low_complexity Low_complexity 1 49 0 210 419 19 13 chr10 100845936 100846091 -39470674 + L2 LINE L2 2734 2889 -425 233 88 0 0 chr10 100846359 100846393 -39470372 + L2 LINE L2 3277 3310 -3 183 42 0 0 chr10 100846533 100846557 -39470208 + (A)n Simple_repeat Simple_repeat 1 24 0 312 91 0 0 chr10 100847327 100847371 -39469394 + (TC)n Simple_repeat Simple_repeat 1 44 0 1985 157 0 0 chr10 100847700 100847993 -39468772 + AluSx SINE Alu 1 293 -19 29 28 0 0 chr10 100847996 100848032 -39468733 + AT_rich Low_complexity Low_complexity 1 36 0 566 170 52 105 chr10 100848164 100848317 -39468448 + MER21B LTR ERV1 719 863 0 1696 201 105 39 chr10 100849084 100849522 -39467243 - MLT1C LTR MaLR 0 467 1 1129 266 75 61 chr10 100849584 100849845 -39466920 + MLT1K LTR MaLR 16 272 -316 1653 185 10 3 chr10 100849845 100850137 -39466628 + AluSx SINE Alu 1 294 -18 1129 266 75 61 chr10 100850137 100850189 -39466576 + MLT1K LTR MaLR 272 322 -266 2081 90 4 8 chr10 100850189 100850455 -39466310 + AluSq SINE Alu 1 265 -48 1129 266 75 61 chr10 100850455 100850697 -39466068 + MLT1K LTR MaLR 322 580 -8 303 244 12 61 chr10 100851902 100851984 -39464781 + MER5A DNA MER1_type 16 93 -96 238 313 61 10 chr10 100852069 100852168 -39464597 - L2 LINE L2 -1852 1462 1359 209 136 0 23 chr10 100852584 100852628 -39464137 + (TA)n Simple_repeat Simple_repeat 2 44 0 356 152 4 11 chr10 100852924 100853150 -39463615 + AluJb SINE Alu 1 280 -22 293 179 19 38 chr10 100853209 100853315 -39463450 + GA-rich Low_complexity Low_complexity 3 106 0 2220 82 33 13 chr10 100853340 100853644 -39463121 + AluSg SINE Alu 1 310 0 2108 101 7 10 chr10 100853657 100853955 -39462810 + AluSp SINE Alu 1 297 -16 2236 101 0 3 chr10 100853965 100854285 -39462480 + AluSq SINE Alu 1 319 0 803 240 278 53 chr10 100854292 100854759 -39462006 - MLT1K LTR MaLR -4 584 13 2419 83 0 3 chr10 100855073 100855373 -39461392 + AluSx SINE Alu 1 299 -13 270 253 25 13 chr10 100855391 100855470 -39461295 + MLT1H LTR MaLR 12 91 -458 2000 154 62 22 chr10 100855621 100855978 -39460787 + THE1C LTR MaLR 1 371 -4 482 177 173 137 chr10 100855988 100856237 -39460528 + MLT1H LTR MaLR 256 513 -36 1847 135 17 17 chr10 100856353 100856649 -39460116 + AluSx SINE Alu 1 296 -16 1573 170 4 19 chr10 100856763 100857034 -39459731 - AluJo SINE Alu -45 267 1 10031 110 140 163 chr10 100857034 100858421 -39458344 - Tigger4(Zombi) DNA MER2_type -164 2567 1150 627 165 21 0 chr10 100858421 100858518 -39458247 + AluJ/FLAM SINE Alu 1 99 -213 928 159 43 0 chr10 100858518 100858681 -39458084 + AluJo/FRAM SINE Alu 135 304 -8 10031 110 140 163 chr10 100858681 100858775 -39457990 - Tigger4(Zombi) DNA MER2_type -1580 1151 1056 811 175 0 0 chr10 100858775 100858901 -39457864 - FLAM_C SINE Alu -17 126 1 10031 110 140 163 chr10 100858901 100859659 -39457106 - Tigger4(Zombi) DNA MER2_type -1675 1056 2 948 117 0 7 chr10 100859659 100859796 -39456969 + AluSq/x SINE Alu 1 136 -176 2225 105 0 7 chr10 100859796 100860100 -39456665 + AluSc SINE Alu 1 302 -7 2320 64 0 0 chr10 100860575 100860888 -39455877 - AluY SINE Alu 0 313 1 228 35 0 0 chr10 100861145 100861174 -39455591 + (TA)n Simple_repeat Simple_repeat 1 29 0 2222 116 0 0 chr10 100861179 100861472 -39455293 - AluSx SINE Alu -19 293 1 1735 176 3 0 chr10 100864205 100864489 -39452276 - AluJo SINE Alu -7 305 21 1053 315 142 22 chr10 100864491 100865332 -39451433 - L2 LINE L2 -277 3036 2093 190 347 56 0 chr10 100865350 100865422 -39451343 + L2 LINE L2 3228 3303 -10 24 32 0 0 chr10 100865538 100865569 -39451196 + AT_rich Low_complexity Low_complexity 1 31 0 1849 136 45 3 chr10 100865933 100866219 -39450546 + AluSc SINE Alu 1 298 -11 1354 149 87 42 chr10 100866888 100867197 -39449568 - L1MB7 LINE L1 -42 6142 5820 1316 188 40 104 chr10 100867206 100867611 -39449154 - MLT1B LTR MaLR -11 379 1 1867 157 6 40 chr10 100867612 100867963 -39448802 - L1MB7 LINE L1 -352 5822 5484 1141 226 75 11 chr10 100867980 100868268 -39448497 - AluJo SINE Alu 0 305 1 3871 209 80 19 chr10 100868268 100869349 -39447416 - L1MB7 LINE L1 -1817 4329 3184 265 49 0 0 chr10 100869366 100869407 -39447358 - AluJo SINE Alu 0 302 262 194 88 0 29 chr10 100869891 100869925 -39446840 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1089 177 5 5 chr10 100869943 100870135 -39446630 - AluJo SINE Alu -31 281 90 2483 61 7 3 chr10 100871230 100871540 -39445225 - AluY SINE Alu 0 311 1 728 159 9 0 chr10 100871699 100871806 -39444959 + AluSq/x SINE Alu 2 109 -203 1241 46 13 0 chr10 100871915 100872066 -39444699 - AluY SINE Alu -150 161 9 2247 103 0 13 chr10 100872144 100872456 -39444309 - AluSc SINE Alu -1 308 1 2280 88 3 3 chr10 100873198 100873495 -39443270 + AluSq SINE Alu 1 297 -16 1608 149 78 11 chr10 100873775 100874056 -39442709 - AluSx SINE Alu -12 300 1 2164 183 75 110 chr10 100874459 100875202 -39441563 + L1MC4 LINE L1 6734 7450 -592 1007 202 40 9 chr10 100875213 100875436 -39441329 + L1MC4a LINE L1 7573 7802 -6 2002 136 16 7 chr10 100875464 100875772 -39440993 + AluSx SINE Alu 1 311 -1 205 171 24 0 chr10 100875872 100875913 -39440852 - L2 LINE L2 -2 3311 3270 204 67 0 0 chr10 100875962 100875992 -39440773 + (CAGT)n Simple_repeat Simple_repeat 1 30 0 411 276 88 29 chr10 100876181 100876298 -39440467 + MIR SINE MIR 77 208 -54 2234 116 3 0 chr10 100876298 100876601 -39440164 + AluSx SINE Alu 1 304 -8 411 276 88 29 chr10 100876601 100876653 -39440112 + MIR SINE MIR 208 256 -6 610 216 126 0 chr10 100877498 100877609 -39439156 + FLAM_A SINE Alu 1 125 -8 2475 52 0 0 chr10 100878680 100878971 -39437794 + AluY SINE Alu 1 291 -20 2108 123 13 0 chr10 100879404 100879712 -39437053 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 100881148 100881168 -39435597 + (TA)n Simple_repeat Simple_repeat 2 21 0 382 232 56 40 chr10 100881203 100881328 -39435437 + MLT1I LTR MaLR 16 142 -267 340 157 0 72 chr10 100881314 100881397 -39435368 + AluJ/FRAM SINE Alu 225 301 -1 * 323 277 181 36 chr10 100881457 100881623 -39435142 + MLT1I LTR MaLR 197 386 -23 1969 215 68 45 chr10 100881656 100881771 -39434994 - L1ME3A LINE L1 -163 6007 5896 1666 175 32 7 chr10 100881771 100882056 -39434709 - AluJo SINE Alu -20 292 1 1969 215 68 45 chr10 100882056 100882599 -39434166 - L1ME3A LINE L1 -274 5896 5293 1437 144 20 61 chr10 100882602 100882686 -39434079 - Tigger7 DNA MER2_type 0 2487 2401 1494 133 43 30 chr10 100882686 100882919 -39433846 - MER46A DNA MER2_type 0 236 1 1437 144 20 61 chr10 100882919 100883150 -39433615 - Tigger7 DNA MER2_type -86 2401 9 1372 153 17 21 chr10 100883159 100883400 -39433365 + Tigger7 DNA MER2_type 2246 2485 -2 396 229 76 52 chr10 100883439 100883649 -39433116 - L1ME3A LINE L1 -872 5274 5060 2240 104 3 0 chr10 100883650 100883949 -39432816 - AluSx SINE Alu -12 300 1 929 147 0 0 chr10 100883949 100884085 -39432680 - AluSq/x SINE Alu -176 136 1 358 236 69 35 chr10 100884095 100884269 -39432496 - L1ME3A LINE L1 -1645 4501 4322 * 1110 142 119 5 chr10 100884266 100884484 -39432281 - L1MD3 LINE L1 0 7995 7753 1382 177 83 8 chr10 100884484 100884750 -39432015 + AluJo SINE Alu 19 304 -8 1657 184 28 9 chr10 100884753 100885080 -39431685 - L1MD3 LINE L1 -253 7742 7410 246 204 19 0 chr10 100885080 100885134 -39431631 - MLT1F1 LTR MaLR -442 125 71 333 189 27 0 chr10 100885268 100885342 -39431423 - L1ME2 LINE L1 -229 5935 5860 2132 123 0 3 chr10 100885365 100885667 -39431098 - AluSg SINE Alu -9 301 1 1434 206 84 32 chr10 100885797 100886054 -39430711 - L1ME3A LINE L1 -3212 2934 2647 2260 109 0 3 chr10 100886054 100886357 -39430408 + AluSx SINE Alu 1 302 -10 1434 206 84 32 chr10 100886357 100886502 -39430263 - L1ME3A LINE L1 -3499 2647 2511 34 42 0 0 chr10 100887452 100887500 -39429265 + AT_rich Low_complexity Low_complexity 1 48 0 207 0 0 0 chr10 100887530 100887553 -39429212 + (A)n Simple_repeat Simple_repeat 1 23 0 703 259 88 87 chr10 100887726 100888414 -39428351 + L1MEd LINE L1 561 1246 -4979 1843 147 47 10 chr10 100888414 100888713 -39428052 + AluJb SINE Alu 3 312 0 703 259 88 87 chr10 100888713 100888790 -39427975 + L1MEd LINE L1 1246 1321 -4904 2283 56 42 7 chr10 100888790 100889076 -39427689 - AluY SINE Alu -15 296 1 703 259 88 87 chr10 100889076 100889411 -39427354 + L1MEd LINE L1 1321 1687 -4538 1437 170 75 103 chr10 100889433 100889887 -39426878 - LTR8A LTR ERV1 0 727 287 1046 103 0 27 chr10 100889960 100890145 -39426620 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 512 251 30 14 chr10 100890150 100890327 -39426438 - LTR8 LTR ERV1 -434 257 115 27 0 0 0 chr10 100890405 100890432 -39426333 + AT_rich Low_complexity Low_complexity 1 27 0 799 329 40 15 chr10 100890473 100890871 -39425894 + L1MEc LINE L1 49 456 -5940 548 92 118 0 chr10 100891045 100891121 -39425644 + AluS SINE Alu 2 86 -226 659 174 6 0 chr10 100891134 100891312 -39425453 + CT-rich Low_complexity Low_complexity 2 180 0 226 226 0 0 chr10 100891329 100891382 -39425383 + AluY SINE Alu 83 135 -166 228 208 0 119 chr10 100891383 100891484 -39425281 - L1MC4 LINE L1 -1339 6703 6615 254 235 0 118 chr10 100891509 100891611 -39425154 - L1MC4 LINE L1 -1339 6703 6614 271 181 28 28 chr10 100891657 100891729 -39425036 - L1MC3 LINE L1 -1143 6642 6571 260 265 72 0 chr10 100891753 100891836 -39424929 - L1MC4 LINE L1 -1339 6703 6615 421 150 17 0 chr10 100891847 100891907 -39424858 + AluSg/x SINE Alu 125 185 -127 1815 94 4 0 chr10 100891907 100892142 -39424623 - AluY SINE Alu -75 236 1 2960 77 0 3 chr10 100892142 100892518 -39424247 - MER4B LTR ERV1 -235 375 1 1978 124 9 73 chr10 100892543 100892873 -39423892 - AluSx SINE Alu -3 309 1 279 0 0 0 chr10 100892876 100892907 -39423858 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2014 111 3 39 chr10 100892911 100893218 -39423547 - AluSp SINE Alu -17 296 1 2455 80 0 13 chr10 100893224 100893535 -39423230 - AluY SINE Alu -4 307 1 1304 202 150 8 chr10 100893537 100893790 -39422975 - AluJo SINE Alu -12 290 2 2517 59 0 3 chr10 100894389 100894692 -39422073 + AluY SINE Alu 1 302 -9 536 260 57 11 chr10 100895093 100895270 -39421495 - MER113 DNA MER1_type? -328 193 9 289 321 29 14 chr10 100895269 100895409 -39421356 + MER103 DNA DNA 24 165 -1 * 2019 130 0 11 chr10 100895418 100895744 -39421021 + AluSx SINE Alu 1 323 0 2211 103 13 3 chr10 100896195 100896496 -39420269 + AluSx SINE Alu 1 304 -8 6129 73 14 58 chr10 100897118 100899287 -39417478 + SVA Other Other 3 1386 0 6462 204 54 52 chr10 100899358 100899628 -39417137 - L1M4 LINE L1 -582 6413 6145 2205 83 3 7 chr10 100899628 100899918 -39416847 - AluSc SINE Alu -20 289 1 6462 204 54 52 chr10 100899918 100901354 -39415411 - L1M4 LINE L1 -850 6145 4714 1461 141 52 33 chr10 100901354 100901624 -39415141 + AluJo SINE Alu 1 275 -37 6462 204 54 52 chr10 100901624 100901949 -39414816 - L1M4 LINE L1 -2281 4714 4363 946 125 0 22 chr10 100901949 100902085 -39414680 + FLAM_C SINE Alu 1 133 0 6462 204 54 52 chr10 100902085 100902161 -39414604 - L1M4 LINE L1 -2632 4363 4289 1680 221 21 18 chr10 100902175 100902555 -39414210 - MLT1C LTR MaLR -1 466 86 1470 118 153 8 chr10 100902555 100902810 -39413955 + MER44D DNA MER2_type 1 562 -47 407 117 130 0 chr10 100902827 100902904 -39413861 - MLT1C LTR MaLR -373 94 8 1134 230 135 18 chr10 100902910 100903414 -39413351 - L1M4 LINE L1 -2679 4278 3716 540 134 67 34 chr10 100903407 100903526 -39413239 - L1M4 LINE L1 -5855 1004 882 * 296 133 0 0 chr10 100903540 100903585 -39413180 + MER57A LTR ERV1 301 345 -58 1644 178 7 7 chr10 100903739 100904048 -39412717 - AluJo SINE Alu -3 309 1 333 0 0 0 chr10 100904239 100904276 -39412489 + (CA)n Simple_repeat Simple_repeat 1 37 0 1361 173 1 0 chr10 100904300 100904614 -39412151 - AluJb SINE Alu -30 282 2 2525 214 52 58 chr10 100904615 100904951 -39411814 - L1 LINE L1 -874 5272 4936 1908 158 0 7 chr10 100904951 100905248 -39411517 - AluSx SINE Alu -17 295 1 2525 214 52 58 chr10 100905248 100905655 -39411110 - L1 LINE L1 -1210 4936 4533 28 29 0 0 chr10 100905659 100905694 -39411071 + AT_rich Low_complexity Low_complexity 1 35 0 195 274 25 123 chr10 100905722 100905926 -39410839 - L2 LINE L2 -10 3303 3120 404 236 9 3 chr10 100907292 100907451 -39409314 + MER58 DNA MER1_type 1 2404 -16 1875 156 7 0 chr10 100907698 100907860 -39408905 - AluJb SINE Alu -21 291 125 320 0 25 0 chr10 100907860 100907900 -39408865 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1875 156 7 0 chr10 100907900 100908026 -39408739 - AluJb SINE Alu -187 125 1 3877 195 82 73 chr10 100908028 100908520 -39408245 - L1MC2 LINE L1 0 8042 7556 2059 110 14 0 chr10 100908520 100908858 -39407907 - AluSx SINE Alu 0 342 1 3877 195 82 73 chr10 100908858 100909078 -39407687 - L1MC2 LINE L1 -486 7556 7339 198 0 0 0 chr10 100909078 100909100 -39407665 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 3877 195 82 73 chr10 100909100 100909634 -39407131 - L1MC2 LINE L1 -703 7339 6248 2978 222 102 9 chr10 100910041 100911271 -39405494 - L1ME1 LINE L1 -8 6158 4822 14625 131 21 31 chr10 100911277 100913697 -39403068 - Tigger1 DNA MER2_type 0 2418 22 954 204 96 36 chr10 100913700 100914034 -39402731 - L1ME1 LINE L1 -1328 4818 4465 978 193 165 68 chr10 100914134 100914456 -39402309 + MLT1A1 LTR MaLR 1 353 -12 28 0 0 0 chr10 100914592 100914620 -39402145 + AT_rich Low_complexity Low_complexity 1 28 0 2051 139 3 7 chr10 100914712 100915015 -39401750 - AluSx SINE Alu -9 303 2 2309 77 3 3 chr10 100915959 100916246 -39400519 - AluSx SINE Alu -25 287 1 1393 89 0 0 chr10 100916246 100916426 -39400339 - L1PB1 LINE L1 -178 5973 5794 2202 203 16 129 chr10 100916428 100916911 -39399854 + L1ME1 LINE L1 5412 5948 -218 2052 152 0 0 chr10 100916911 100917214 -39399551 + AluSx SINE Alu 1 303 -9 2202 203 16 129 chr10 100917214 100917332 -39399433 + L1ME1 LINE L1 5948 5909 -257 1720 192 7 0 chr10 100917332 100917624 -39399141 + AluJb SINE Alu 1 294 -18 2202 203 16 129 chr10 100917624 100917795 -39398970 + L1ME1 LINE L1 5908 6097 -69 2070 144 3 0 chr10 100917804 100918109 -39398656 - AluSx SINE Alu -6 306 1 2000 126 16 13 chr10 100918158 100918467 -39398298 - AluSx SINE Alu -2 310 1 444 296 57 6 chr10 100918681 100918840 -39397925 + MIR SINE MIR 46 212 -50 322 197 70 0 chr10 100919282 100919353 -39397412 + MER5A DNA MER1_type 1 76 -113 31 26 0 0 chr10 100919370 100919408 -39397357 + AT_rich Low_complexity Low_complexity 1 38 0 563 193 22 67 chr10 100919432 100919567 -39397198 + MER5A DNA MER1_type 61 189 0 190 0 0 0 chr10 100919725 100919746 -39397019 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 2401 74 0 0 chr10 100919746 100920030 -39396735 - AluY SINE Alu -1 304 1 2126 128 0 13 chr10 100920032 100920337 -39396428 - AluSq SINE Alu -12 301 1 232 91 0 0 chr10 100920788 100920821 -39395944 + MLT1G LTR MaLR 553 585 -5 1192 123 0 6 chr10 101021240 101021403 -39295362 - AluSg/x SINE Alu -15 295 134 1633 110 0 5 chr10 101021771 101021989 -39294776 + AluSq SINE Alu 8 224 -89 2425 85 0 13 chr10 101022837 101023144 -39293621 - AluSq SINE Alu -10 303 1 465 233 69 63 chr10 101024763 101024952 -39291813 - MIR SINE MIR -7 255 66 312 225 134 48 chr10 101026312 101026479 -39290286 + MIR SINE MIR 20 192 -60 194 278 95 48 chr10 101026599 101026725 -39290040 - MIR SINE MIR -84 178 47 191 306 20 61 chr10 101027044 101027142 -39289623 + MIR SINE MIR 90 183 -79 240 313 15 0 chr10 101027673 101027740 -39289025 - L2 LINE L2 -1 3312 3245 2542 166 44 2 chr10 101027862 101028320 -39288445 + L1MC1 LINE L1 5838 6314 -19 221 36 0 0 chr10 101028320 101028348 -39288417 + MIR SINE MIR 114 141 -67 339 186 23 35 chr10 101030661 101030747 -39286018 - L1ME4a LINE L1 -96 6025 5941 341 314 8 0 chr10 101030896 101031020 -39285745 - L1ME LINE L1 -440 5681 5557 892 183 143 29 chr10 101031386 101031570 -39285195 - MER33 DNA MER1_type -2261 324 98 2462 106 0 0 chr10 101031570 101031882 -39284883 - AluSx SINE Alu 0 312 1 892 183 143 29 chr10 101031882 101031970 -39284795 - MER33 DNA MER1_type -2487 98 21 923 190 13 66 chr10 101032581 101032651 -39284114 + MER72 LTR ERV1 9 81 -641 1722 109 4 0 chr10 101032651 101032881 -39283884 - AluSq SINE Alu -25 288 58 923 190 13 66 chr10 101032881 101032972 -39283793 + MER72 LTR ERV1 81 157 -565 1544 181 10 45 chr10 101032972 101033282 -39283483 - AluJo SINE Alu -13 299 1 923 190 13 66 chr10 101033282 101033345 -39283420 + MER72 LTR ERV1 157 222 -500 1256 218 65 4 chr10 101033349 101033610 -39283155 - AluJo SINE Alu -35 277 1 2903 167 47 0 chr10 101033610 101034102 -39282663 + MER72 LTR ERV1 208 722 0 221 305 47 23 chr10 101034293 101034421 -39282344 + MIR SINE MIR 42 172 -90 200 279 49 0 chr10 101035961 101036022 -39280743 + L2 LINE L2 3208 3271 -1 234 0 0 0 chr10 101036640 101036666 -39280099 + (A)n Simple_repeat Simple_repeat 1 26 0 884 153 93 0 chr10 101037211 101037361 -39279404 - FRAM SINE Alu -2 164 1 1208 99 19 0 chr10 101038081 101038243 -39278522 - AluSg/x SINE Alu -7 305 141 333 149 0 0 chr10 101038243 101038290 -39278475 - Alu SINE Alu -252 50 4 371 284 123 41 chr10 101038691 101038983 -39277782 + L1ME LINE L1 5346 5661 -460 31 0 0 0 chr10 101040300 101040331 -39276434 + AT_rich Low_complexity Low_complexity 1 31 0 758 163 37 7 chr10 101042081 101042216 -39274549 - FAM SINE Alu -16 169 31 2054 103 10 33 chr10 101042240 101042542 -39274223 + AluSc SINE Alu 1 295 -14 2320 94 0 7 chr10 101044404 101044711 -39272054 + AluSq SINE Alu 1 305 -8 2049 90 56 19 chr10 101045312 101045635 -39271130 - L1MA1 LINE L1 -4 6298 5964 1485 133 5 0 chr10 101047258 101047476 -39269289 - AluSx SINE Alu -93 219 1 181 295 179 9 chr10 101049394 101049506 -39267259 - L2 LINE L2 -4 3309 3179 215 254 42 0 chr10 101049793 101049864 -39266901 + MIR SINE MIR 39 112 -150 1839 172 10 0 chr10 101050439 101050735 -39266030 - AluJb SINE Alu -13 299 1 2749 232 162 78 chr10 101050771 101052695 -39264070 + HAL1 LINE L1 118 2202 -305 1167 279 75 16 chr10 101052767 101053151 -39263614 + L1M3a LINE L1 29 435 -5520 28 48 0 0 chr10 101053827 101053869 -39262896 + AT_rich Low_complexity Low_complexity 1 42 0 365 189 57 38 chr10 101053969 101054075 -39262690 + L1ME3A LINE L1 6054 6161 -9 24 0 0 0 chr10 101054395 101054419 -39262346 + AT_rich Low_complexity Low_complexity 1 24 0 248 274 110 0 chr10 101055675 101055748 -39261017 - MIR SINE MIR -78 130 50 2028 142 3 7 chr10 101056135 101056438 -39260327 - AluJb SINE Alu -5 307 6 380 268 96 3 chr10 101056591 101056757 -39260008 + MIR SINE MIR 46 222 -40 23 0 0 0 chr10 101056823 101056846 -39259919 + AT_rich Low_complexity Low_complexity 1 23 0 369 0 0 0 chr10 101057658 101057699 -39259066 + (TG)n Simple_repeat Simple_repeat 2 42 0 2051 134 10 0 chr10 101058129 101058420 -39258345 + AluSx SINE Alu 1 294 -18 2216 111 0 10 chr10 101058422 101058729 -39258036 + AluSx SINE Alu 1 304 -8 238 174 189 30 chr10 101058749 101058881 -39257884 - L1MCa LINE L1 -4073 2353 2201 288 233 55 0 chr10 101059350 101059423 -39257342 - MIR3 SINE MIR -48 160 84 650 246 48 21 chr10 101059519 101059706 -39257059 + LTR41 LTR ERVL 1 192 -581 305 191 35 104 chr10 101060183 101060197 -39256568 + LTR41 LTR ERVL 659 672 -101 2353 73 28 3 chr10 101060197 101060486 -39256279 - AluSq SINE Alu -17 296 1 305 191 35 104 chr10 101060486 101060586 -39256179 + LTR41 LTR ERVL 672 765 -8 2116 109 28 0 chr10 101061199 101061484 -39255281 + AluSx SINE Alu 1 293 -19 2217 98 28 0 chr10 101062278 101062563 -39254202 - AluSc SINE Alu -16 293 1 2212 131 0 0 chr10 101062770 101063082 -39253683 - AluSx SINE Alu 0 312 1 266 330 141 73 chr10 101063181 101063387 -39253378 - MIR SINE MIR -29 233 14 236 224 53 13 chr10 101063403 101063479 -39253286 + L2 LINE L2 3194 3272 0 23 0 0 0 chr10 101063693 101063716 -39253049 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr10 101063977 101064030 -39252735 + AT_rich Low_complexity Low_complexity 1 53 0 2204 120 26 104 chr10 101064307 101064798 -39251967 - MLT2A2 LTR ERVL 0 453 1 1714 79 32 0 chr10 101065401 101065617 -39251148 + AluSg SINE Alu 3 225 -85 602 262 94 15 chr10 101065617 101065819 -39250946 + MIR SINE MIR 17 234 -28 2302 114 35 44 chr10 101065843 101066138 -39250627 + THE1B LTR MaLR 1 294 -70 2133 126 13 0 chr10 101066138 101066440 -39250325 - AluSg SINE Alu -4 306 1 2302 114 35 44 chr10 101066440 101066511 -39250254 + THE1B LTR MaLR 294 364 0 25 0 0 0 chr10 101066943 101066968 -39249797 + AT_rich Low_complexity Low_complexity 1 25 0 2671 55 0 0 chr10 101067566 101067876 -39248889 + AluY SINE Alu 1 310 -1 2871 3 0 0 chr10 101068290 101068592 -39248173 - AluYa5 SINE Alu -9 302 1 1972 133 21 0 chr10 101070549 101070834 -39245931 - AluSx SINE Alu -21 291 1 2291 110 0 3 chr10 101071285 101071595 -39245170 + AluSx SINE Alu 1 309 -3 2078 135 0 16 chr10 101072108 101072419 -39244346 + AluJo SINE Alu 1 306 -6 392 263 51 45 chr10 101072460 101072507 -39244258 + MIR SINE MIR 73 118 -144 2626 138 8 10 chr10 101072507 101072898 -39243867 - MLT1B LTR MaLR 0 390 1 392 263 51 45 chr10 101072898 101073006 -39243759 + MIR SINE MIR 118 229 -33 228 135 0 0 chr10 101073646 101073683 -39243082 + (CA)n Simple_repeat Simple_repeat 2 38 0 471 59 0 0 chr10 101074333 101074401 -39242364 + Alu SINE Alu 242 309 0 4514 175 75 21 chr10 101074405 101075529 -39241236 + L1MD1 LINE L1 5025 6222 -20 2227 130 0 0 chr10 101075906 101076214 -39240551 + AluSx SINE Alu 1 308 -4 2398 180 128 28 chr10 101076279 101076929 -39239836 - Charlie1a DNA MER1_type 0 1455 741 292 170 0 0 chr10 101076937 101076990 -39239775 + Alu SINE Alu 1 53 -255 662 231 198 17 chr10 101077091 101077329 -39239436 - Charlie1a DNA MER1_type -1000 455 175 314 231 154 0 chr10 101077333 101077411 -39239354 - Charlie1a DNA MER1_type -1304 151 62 2371 90 3 6 chr10 101077534 101077845 -39238920 - AluSg SINE Alu 0 310 1 2432 73 0 7 chr10 101079857 101080158 -39236607 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 101080533 101080838 -39235927 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 101080932 101081230 -39235535 + AluSx SINE Alu 1 298 -14 1217 154 62 14 chr10 101081474 101081682 -39235083 + MER20B DNA MER1_type 2 219 0 221 256 58 66 chr10 101081894 101082015 -39234750 - MIR SINE MIR -5 257 138 662 185 199 7 chr10 101082029 101082180 -39234585 + AluJo SINE Alu 120 299 -13 233 239 152 76 chr10 101082196 101082288 -39234477 - MIR SINE MIR -136 126 28 706 279 169 13 chr10 101082318 101082619 -39234146 - L2 LINE L2 0 3313 2966 2169 87 4 0 chr10 101082854 101083131 -39233634 + AluSc SINE Alu 29 306 -3 1598 184 0 26 chr10 101083136 101083445 -39233320 + AluJb SINE Alu 1 301 -11 2213 128 0 0 chr10 101083451 101083749 -39233016 + AluSx SINE Alu 1 298 -14 1933 160 47 11 chr10 101083786 101084148 -39232617 + L1MA9 LINE L1 5938 6312 0 190 343 153 7 chr10 101084381 101084518 -39232247 - MIR SINE MIR -76 186 30 577 291 29 12 chr10 101084663 101084835 -39231930 + MIR SINE MIR 31 205 -57 2671 143 42 2 chr10 101085173 101085628 -39231137 + L1MB2 LINE L1 5668 6140 -31 342 0 0 0 chr10 101087179 101087217 -39229548 + (TG)n Simple_repeat Simple_repeat 2 39 0 2211 114 0 7 chr10 101087228 101087535 -39229230 - AluSq SINE Alu -7 306 2 194 213 64 0 chr10 101088050 101088097 -39228668 + L2 LINE L2 3259 3308 -5 2173 101 3 0 chr10 101088525 101088812 -39227953 + AluSg1 SINE Alu 1 288 -21 1344 91 0 11 chr10 101088812 101088987 -39227778 + AluSg/x SINE Alu 134 306 -6 251 197 113 42 chr10 101089930 101090001 -39226764 + MER20B DNA MER1_type 201 276 -507 198 0 0 0 chr10 101090140 101090162 -39226603 + (T)n Simple_repeat Simple_repeat 1 22 0 1621 164 30 33 chr10 101091296 101091595 -39225170 - AluJo SINE Alu -14 298 1 241 79 0 0 chr10 101091700 101091738 -39225027 + L1MC4 LINE L1 8005 8042 0 242 245 130 78 chr10 101091841 101092033 -39224732 + MIR SINE MIR 48 249 -13 202 214 0 71 chr10 101092890 101092960 -39223805 + GA-rich Low_complexity Low_complexity 3 67 0 825 232 93 13 chr10 101092961 101093198 -39223567 + MIR SINE MIR 5 260 -2 301 368 11 0 chr10 101093279 101093374 -39223391 - MIR SINE MIR -97 111 16 332 250 111 0 chr10 101093481 101093589 -39223176 + MIR SINE MIR 109 228 -34 1503 163 38 75 chr10 101093923 101094243 -39222522 + AluJb SINE Alu 1 308 -4 2131 119 24 0 chr10 101094439 101094732 -39222033 - AluSx SINE Alu -12 300 1 181 263 0 0 chr10 101095345 101095383 -39221382 + L2 LINE L2 3186 3223 -49 342 248 87 13 chr10 101095654 101095803 -39220962 + Charlie7 DNA MER1_type 2453 2612 0 1468 158 12 0 chr10 101096135 101096376 -39220389 + AluSx SINE Alu 52 295 -17 1012 194 80 5 chr10 101097719 101097920 -39218845 - MER20B DNA MER1_type 0 219 4 2275 92 0 0 chr10 101098573 101098893 -39217872 - AluSx SINE Alu 0 320 1 2241 104 13 0 chr10 101098970 101099269 -39217496 - AluSx SINE Alu -9 303 1 208 326 125 49 chr10 101099659 101099843 -39216922 - L3 LINE CR1 -472 1105 908 2064 114 31 3 chr10 101099981 101100271 -39216494 - AluSx SINE Alu -14 298 1 2248 74 10 3 chr10 101101079 101101376 -39215389 + AluSq SINE Alu 1 299 -14 348 326 124 6 chr10 101101414 101101592 -39215173 + MIR SINE MIR 21 219 -43 1326 122 91 0 chr10 101101741 101101962 -39214803 + LTR9B LTR ERV1 404 644 0 343 268 102 64 chr10 101102357 101102514 -39214251 - MIR3 SINE MIR -44 164 2 435 187 11 0 chr10 101102579 101102670 -39214095 + L1MA9 LINE L1 6189 6280 -32 518 283 102 51 chr10 101102728 101103042 -39213723 + HAL1 LINE L1 116 445 -2062 1363 171 97 133 chr10 101103302 101103776 -39212989 + MLT1E3 LTR MaLR 189 615 -9 239 149 64 0 chr10 101104016 101104063 -39212702 - Alu SINE Alu -252 50 1 5345 192 103 50 chr10 101104094 101104579 -39212186 - L1MDa LINE L1 -4977 1563 1105 2004 137 14 0 chr10 101104579 101104872 -39211893 - AluSx SINE Alu -15 297 1 5345 192 103 50 chr10 101104872 101105564 -39211201 - L1MDa LINE L1 -5435 1105 292 1048 170 0 6 chr10 101105564 101105735 -39211030 - FAM SINE Alu -5 170 1 5345 192 103 50 chr10 101105735 101106020 -39210745 - L1MDa LINE L1 -6248 292 23 2177 256 57 0 chr10 101106484 101107063 -39209702 - L1ME2 LINE L1 -99 6065 5454 226 194 54 54 chr10 101107144 101107237 -39209528 - L1P5 LINE L1 -724 5430 5338 180 0 0 0 chr10 101107290 101107310 -39209455 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1631 91 13 26 chr10 101107505 101107737 -39209028 - AluSx SINE Alu -75 237 9 2327 91 7 13 chr10 101107765 101108072 -39208693 - AluSx SINE Alu -7 305 1 719 219 19 38 chr10 101109179 101109339 -39207426 + AluJo SINE Alu 126 282 -30 194 0 39 0 chr10 101109343 101109369 -39207396 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1177 243 115 90 chr10 101109369 101109541 -39207224 - L1ME3A LINE L1 -2 6168 6002 2052 129 0 16 chr10 101109541 101109852 -39206913 - AluY SINE Alu -1 310 5 1177 243 115 90 chr10 101109852 101110376 -39206389 - L1ME3A LINE L1 -168 6002 5455 1182 210 27 8 chr10 101110839 101111101 -39205664 - L1MD3 LINE L1 0 7995 7729 273 266 0 0 chr10 101111100 101111164 -39205601 - L1MC/D LINE L1 -1982 5826 5763 * 294 185 62 0 chr10 101111174 101111239 -39205526 - L1MC/D LINE L1 -639 5523 5455 211 342 66 0 chr10 101111249 101111325 -39205440 + MIR3 SINE MIR 104 184 -24 271 241 158 45 chr10 101111389 101111522 -39205243 - L1MC/D LINE L1 -2070 5738 5591 652 201 58 26 chr10 101111639 101111793 -39204972 - MER3 DNA MER1_type -50 159 1 300 220 144 17 chr10 101112140 101112241 -39204524 + MLT1E2 LTR MaLR 122 258 -366 1671 245 40 23 chr10 101112271 101112752 -39204013 - MER65B LTR ERV1 -42 489 1 1468 260 31 18 chr10 101112752 101113133 -39203632 + MLT1E2 LTR MaLR 241 626 0 540 209 18 0 chr10 101113559 101113669 -39203096 + MER58 DNA MER1_type 2309 2420 0 529 127 0 0 chr10 101114437 101114516 -39202249 + AluS SINE Alu 2 80 -233 1942 132 7 7 chr10 101114633 101114936 -39201829 - AluSq SINE Alu -10 303 1 3604 243 92 19 chr10 101114942 101116101 -39200664 - L1M4 LINE L1 -1885 4261 2870 1639 193 3 7 chr10 101116101 101116402 -39200363 - AluJo SINE Alu -12 300 1 3604 243 92 19 chr10 101116402 101116828 -39199937 - L1M4 LINE L1 -3276 2870 2477 3469 122 27 0 chr10 101117547 101118031 -39198734 + LOR1a LTR ERV1 1 497 0 217 204 0 23 chr10 101119121 101119165 -39197600 - MIR3 SINE MIR -15 193 151 336 212 81 20 chr10 101120064 101120163 -39196602 - L1MC5 LINE L1 -100 7861 7757 1235 192 216 38 chr10 101120230 101120683 -39196082 + LTR64 LTR ERVK 23 556 -2 3820 176 46 45 chr10 101120692 101120747 -39196018 - L1MC3 LINE L1 -10 7775 7722 2119 106 6 31 chr10 101120747 101121067 -39195698 + AluSx SINE Alu 1 312 0 3820 176 46 45 chr10 101121067 101121951 -39194814 - L1MC3 LINE L1 -63 7722 6835 820 229 51 11 chr10 101122084 101122259 -39194506 - AluJo SINE Alu 0 312 131 885 137 30 15 chr10 101122309 101122440 -39194325 - AluJo SINE Alu -169 133 1 338 333 21 14 chr10 101122625 101122766 -39193999 - L1MC4 LINE L1 -573 7469 7328 1277 233 83 64 chr10 101122772 101123551 -39193214 - L1MC4a LINE L1 -632 7216 6451 203 359 22 22 chr10 101125613 101125705 -39191060 + MIR SINE MIR 12 103 -105 1464 178 0 53 chr10 101127318 101127622 -39189143 - AluJo SINE Alu -14 298 11 21 57 0 0 chr10 101128795 101128830 -39187935 + AT_rich Low_complexity Low_complexity 1 35 0 459 295 16 38 chr10 101128903 101129086 -39187679 + LTR33 LTR ERVL 10 188 -333 527 248 25 12 chr10 101129160 101129321 -39187444 + LTR33 LTR ERVL 354 516 -5 256 361 54 23 chr10 101129947 101130077 -39186688 + L3 LINE CR1 464 597 -980 301 367 48 68 chr10 101130122 101130433 -39186332 - L2 LINE L2 -78 3194 2890 565 210 0 0 chr10 101130744 101130844 -39185921 + AluJ/FLAM SINE Alu 1 100 -212 243 125 0 0 chr10 101130944 101130984 -39185781 + (GGGAA)n Simple_repeat Simple_repeat 5 44 0 951 105 0 17 chr10 101130985 101131166 -39185599 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 225 259 19 0 chr10 101131522 101131576 -39185189 - L2 LINE L2 -41 3231 3177 21 0 0 0 chr10 101131877 101131898 -39184867 + AT_rich Low_complexity Low_complexity 1 21 0 2190 116 0 7 chr10 101131963 101132255 -39184510 - AluSx SINE Alu -22 290 1 1731 213 12 50 chr10 101132770 101133193 -39183572 + Tigger7 DNA MER2_type 1 407 -2080 327 215 66 25 chr10 101133747 101133868 -39182897 + L1MEc LINE L1 399 524 -5872 2520 226 99 60 chr10 101135357 101136155 -39180610 + L1MEc LINE L1 56 906 -5490 1783 130 38 38 chr10 101136155 101136447 -39180318 + AluJo SINE Alu 3 294 -18 2520 226 99 60 chr10 101136447 101136695 -39180070 + L1MEc LINE L1 906 1143 -5253 383 192 154 0 chr10 101136696 101136774 -39179991 + L2 LINE L2 2217 2306 -1008 788 199 104 50 chr10 101136797 101137038 -39179727 + L2 LINE L2 2269 2522 -792 773 269 78 42 chr10 101137031 101137339 -39179426 + L2 LINE L2 2995 3313 0 * 23 0 0 0 chr10 101137402 101137425 -39179340 + AT_rich Low_complexity Low_complexity 1 23 0 320 281 12 12 chr10 101137463 101137545 -39179220 - L2 LINE L2 -23 3290 3209 2349 113 0 0 chr10 101137758 101138067 -39178698 - AluSx SINE Alu -3 309 1 1705 250 55 5 chr10 101139788 101140357 -39176408 + L1MD3 LINE L1 7383 7979 -16 2481 105 25 0 chr10 101140650 101141003 -39175762 + THE1B LTR MaLR 3 364 0 342 0 0 0 chr10 101142051 101142089 -39174676 + (TG)n Simple_repeat Simple_repeat 2 39 0 621 240 36 31 chr10 101142308 101142533 -39174232 + LTR67 LTR ERVL 331 556 -1 1667 60 39 4 chr10 101143776 101144010 -39172755 + MER75B DNA T2_type 1 242 -1 2116 134 0 0 chr10 101144327 101144626 -39172139 + AluSg SINE Alu 1 299 -11 1249 180 5 0 chr10 101145111 101145322 -39171443 + AluSx SINE Alu 1 212 -100 255 219 26 53 chr10 101146189 101146303 -39170462 - MER33 DNA MER1_type 0 324 214 241 203 165 60 chr10 101146292 101146425 -39170340 - MER33 DNA MER1_type -173 151 5 * 1415 243 105 89 chr10 101146429 101147060 -39169705 + MER115 DNA AcHobo 53 693 0 294 155 17 0 chr10 101147617 101147675 -39169090 - MLT1G1 LTR MaLR 0 595 537 229 250 0 0 chr10 101147967 101148023 -39168742 - MLT1I LTR MaLR -274 135 80 2074 133 46 27 chr10 101152121 101152489 -39164276 + THE1C LTR MaLR 1 375 0 1797 164 7 26 chr10 101153685 101153995 -39162770 - AluJb SINE Alu -8 304 1 303 346 24 39 chr10 101154006 101154133 -39162632 + L2 LINE L2 3148 3272 0 2189 128 27 0 chr10 101155241 101155569 -39161196 + MER1B DNA MER1_type 1 337 0 23 33 0 0 chr10 101156047 101156077 -39160688 + AT_rich Low_complexity Low_complexity 1 30 0 564 134 31 34 chr10 101156082 101156540 -39160225 + (TTATA)n Simple_repeat Simple_repeat 1 456 0 557 128 5 53 chr10 101156532 101156720 -39160045 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 367 151 62 3 chr10 101156722 101157015 -39159750 + (TA)n Simple_repeat Simple_repeat 1 310 0 207 55 91 36 chr10 101157015 101157070 -39159695 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 780 106 13 41 chr10 101157072 101157415 -39159350 + (TTATA)n Simple_repeat Simple_repeat 1 333 0 1149 163 25 10 chr10 101257425 101257621 -39059144 + MSTB LTR MaLR 228 426 0 1355 216 34 93 chr10 101257621 101258079 -39058686 + L1MC5 LINE L1 7157 7582 -379 2267 115 0 3 chr10 101258079 101258383 -39058382 + AluSg SINE Alu 3 305 -5 1355 216 34 93 chr10 101258383 101258452 -39058313 + L1MC5 LINE L1 7582 7653 -308 1020 176 22 0 chr10 101258583 101258765 -39058000 + MSTB LTR MaLR 241 426 0 696 93 16 2 chr10 101258774 101258880 -39057885 - MSTB LTR MaLR -238 117 1 483 249 139 6 chr10 101259549 101259714 -39057051 - MIR SINE MIR -31 231 45 2625 166 52 145 chr10 101260087 101260337 -39056428 - L1MB7 LINE L1 -5 6179 5907 1841 158 16 10 chr10 101260337 101260647 -39056118 + AluJo SINE Alu 1 312 0 2625 166 52 145 chr10 101260647 101260901 -39055864 - L1MB7 LINE L1 -277 5907 5780 2436 88 0 10 chr10 101260901 101261209 -39055556 - AluSg1 SINE Alu -3 306 2 2625 166 52 145 chr10 101261209 101261571 -39055194 - L1MB7 LINE L1 -404 5780 5386 230 184 103 69 chr10 101262884 101262971 -39053794 + MIR SINE MIR 103 192 -70 2051 137 0 3 chr10 101262982 101263328 -39053437 - AluSx SINE Alu 0 345 1 2519 91 0 0 chr10 101263336 101263645 -39053120 - AluY SINE Alu -1 310 2 2390 100 0 0 chr10 101263810 101264109 -39052656 - AluSg SINE Alu -11 299 1 833 184 27 0 chr10 101264349 101264496 -39052269 + L1MC1 LINE L1 5460 5610 -723 885 216 38 28 chr10 101265166 101265379 -39051386 + MIR SINE MIR 17 231 -31 364 281 195 26 chr10 101265487 101265966 -39050799 - L2 LINE L2 -110 3203 2637 545 241 54 18 chr10 101266213 101266379 -39050386 + L1ME3A LINE L1 5999 6170 0 243 88 0 0 chr10 101269229 101269263 -39047502 + (TGG)n Simple_repeat Simple_repeat 3 36 0 385 155 48 257 chr10 101269263 101269346 -39047419 - MIR SINE MIR -9 253 154 2335 74 3 0 chr10 101269346 101269660 -39047105 - AluY SINE Alu 0 315 1 385 155 48 257 chr10 101269660 101269701 -39047064 - MIR SINE MIR -108 154 106 761 179 0 8 chr10 101269701 101269835 -39046930 + L1MC1 LINE L1 6195 6327 -6 1672 165 26 26 chr10 101269836 101270019 -39046746 - AluJo SINE Alu -9 303 118 207 0 0 0 chr10 101270019 101270042 -39046723 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1672 165 26 26 chr10 101270042 101270161 -39046604 - AluJo SINE Alu -193 119 1 385 155 48 257 chr10 101270161 101270238 -39046527 - MIR SINE MIR -155 107 91 3148 145 47 25 chr10 101270536 101270638 -39046127 + L1MC1 LINE L1 5725 5823 -510 2266 101 0 38 chr10 101270638 101270954 -39045811 + AluSx SINE Alu 1 304 -8 3148 145 47 25 chr10 101270954 101271445 -39045320 + L1MC1 LINE L1 5823 6331 -2 184 163 41 41 chr10 101272290 101272339 -39044426 + MER5A DNA MER1_type 61 109 -80 938 172 24 0 chr10 101272394 101272563 -39044202 - MER5B DNA MER1_type -1 177 5 906 230 38 87 chr10 101274206 101274575 -39042190 + LTR37B LTR ERV1 116 466 -2 272 337 11 0 chr10 101274587 101274682 -39042083 - MIR SINE MIR -62 146 51 311 303 8 41 chr10 101274731 101274853 -39041912 - MIR3 SINE MIR -25 183 66 415 246 55 24 chr10 101275483 101275610 -39041155 + L2 LINE L2 3182 3311 -2 832 264 58 21 chr10 101275703 101275945 -39040820 - MIR SINE MIR -3 259 9 1074 208 122 98 chr10 101276141 101276640 -39040125 + MLT1J LTR MaLR 1 511 0 884 204 42 47 chr10 101277117 101277308 -39039457 - MER91B DNA MER1_type 0 190 1 2117 136 3 0 chr10 101277890 101278200 -39038565 + AluSq SINE Alu 1 311 -2 218 348 85 8 chr10 101278625 101278743 -39038022 + MIR3 SINE MIR 45 171 -37 229 192 206 0 chr10 101278799 101278872 -39037893 - MER5A DNA MER1_type -93 96 9 193 191 149 0 chr10 101280532 101280579 -39036186 + L2 LINE L2 3003 3056 -216 241 381 14 42 chr10 101281685 101281918 -39034847 + MIR SINE MIR 34 261 -1 310 322 28 14 chr10 101284786 101284929 -39031836 + L2 LINE L2 2652 2796 -518 1688 151 25 14 chr10 101285097 101285376 -39031389 + AluJo SINE Alu 1 282 -30 189 74 0 0 chr10 101285380 101285407 -39031358 + (CAA)n Simple_repeat Simple_repeat 2 28 0 305 300 92 68 chr10 101285476 101285769 -39030996 + L1ME4a LINE L1 5355 5654 -467 1507 185 53 15 chr10 101285822 101286163 -39030602 + MLT1A1 LTR MaLR 12 365 0 661 276 52 108 chr10 101286167 101286548 -39030217 + L1ME4a LINE L1 5699 6058 -63 421 315 19 25 chr10 101286591 101286753 -39030012 + L1MC4a LINE L1 5781 5941 -1867 872 156 40 0 chr10 101286853 101287026 -39029739 - MER3 DNA MER1_type 0 209 30 648 242 0 0 chr10 101289685 101289937 -39026828 + (CAGG)n Simple_repeat Simple_repeat 1 252 0 804 124 0 0 chr10 101291041 101291154 -39025611 + AluSp/q SINE Alu 190 302 -11 465 233 33 8 chr10 101291891 101292011 -39024754 - MER104 DNA Tc2 -54 126 4 529 251 186 10 chr10 101292054 101292253 -39024512 - MIR SINE MIR -9 253 20 521 273 30 0 chr10 101293441 101293573 -39023192 + MER91B DNA MER1_type 55 190 0 302 269 159 35 chr10 101293745 101293890 -39022875 + L1ME4a LINE L1 5959 6121 0 363 264 16 40 chr10 101294070 101294195 -39022570 - L2 LINE L2 -342 2972 2851 249 309 21 21 chr10 101294234 101294331 -39022434 - L2 LINE L2 -591 2723 2627 345 214 43 0 chr10 101294582 101294652 -39022113 + MER91B DNA MER1_type 4 76 -114 251 339 118 0 chr10 101295952 101296079 -39020686 - MIR SINE MIR -74 188 47 228 188 0 42 chr10 101297021 101297069 -39019696 + L2 LINE L2 3223 3268 -4 271 336 10 0 chr10 101297109 101297213 -39019552 + MIR SINE MIR 57 161 -101 512 293 112 0 chr10 101297213 101297418 -39019347 - MIR SINE MIR -10 252 25 1660 215 151 0 chr10 101297475 101297940 -39018825 - L1ME3 LINE L1 -92 6070 5536 183 220 0 0 chr10 101298255 101298305 -39018460 + (CA)n Simple_repeat Simple_repeat 1 50 0 193 267 27 0 chr10 101298928 101299003 -39017762 - L2 LINE L2 -655 2659 2583 208 299 6 40 chr10 101299064 101299241 -39017524 + GA-rich Low_complexity Low_complexity 5 175 0 346 170 126 52 chr10 101301063 101301198 -39015567 - Charlie7 DNA MER1_type -2454 158 14 589 281 25 20 chr10 101301281 101301477 -39015288 + MER117 DNA MER1_type 1 197 0 346 263 122 25 chr10 101301535 101301742 -39015023 - MIR SINE MIR 0 262 37 457 156 13 0 chr10 101302246 101302323 -39014442 + L2 LINE L2 3236 3313 0 2010 173 92 5 chr10 101302455 101302848 -39013917 + MSTA LTR MaLR 1 427 -1 235 322 51 25 chr10 101303034 101303152 -39013613 - MIR SINE MIR -122 140 20 643 271 0 0 chr10 101303507 101303651 -39013114 - MIR SINE MIR -96 166 23 305 253 25 0 chr10 101303658 101303737 -39013028 - MIR SINE MIR -88 174 94 270 226 16 0 chr10 101304118 101304180 -39012585 + L2 LINE L2 3238 3300 -13 243 0 0 0 chr10 101304180 101304207 -39012558 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 279 314 51 8 chr10 101304287 101304405 -39012360 + MIR SINE MIR 33 155 -107 350 316 38 61 chr10 101305598 101305810 -39010955 - L2 LINE L2 -213 3059 2853 2507 207 86 0 chr10 101305811 101306333 -39010432 + MLT1F1 LTR MaLR 1 567 0 323 309 10 0 chr10 101306413 101306510 -39010255 + MIR3 SINE MIR 91 188 -20 1807 157 12 6 chr10 101306535 101306866 -39009899 + MLT1A1 LTR MaLR 1 333 -32 1267 183 52 8 chr10 101306866 101307118 -39009647 - AluJo SINE Alu -11 301 39 241 128 0 0 chr10 101307118 101307157 -39009608 + MLT1A1 LTR MaLR 336 374 0 324 349 132 0 chr10 101307454 101307643 -39009122 + MIR SINE MIR 48 261 -1 454 217 119 41 chr10 101308358 101308525 -39008240 + MIR SINE MIR 5 181 -62 271 278 75 59 chr10 101308544 101308731 -39008034 + L2 LINE L2 2883 3072 -241 198 239 0 0 chr10 101308888 101308934 -39007831 + L2 LINE L2 3226 3271 -1 212 304 43 0 chr10 101309916 101309985 -39006780 + MIR SINE MIR 86 157 -105 319 238 88 12 chr10 101310367 101310447 -39006318 + MER5A DNA MER1_type 26 111 -78 1555 184 14 17 chr10 101311657 101311951 -39004814 + AluJo SINE Alu 3 295 -17 220 135 0 0 chr10 101312225 101312262 -39004503 + MIR SINE MIR 109 145 -63 1619 176 13 22 chr10 101312498 101312810 -39003955 + AluJo SINE Alu 3 311 -1 219 222 0 0 chr10 101312911 101312956 -39003809 - L2 LINE L2 -2 3270 3226 1170 109 17 0 chr10 101313739 101313913 -39002852 + AluSg/x SINE Alu 121 297 -15 339 237 11 21 chr10 101313953 101314046 -39002719 + MER97c DNA MER1_type? 88 179 -911 357 294 42 8 chr10 101314693 101314812 -39001953 - MIR3 SINE MIR -12 196 74 387 274 206 0 chr10 101315258 101315404 -39001361 + MER5A DNA MER1_type 7 182 -7 2157 127 3 9 chr10 101315407 101315722 -39001043 + AluSq SINE Alu 1 313 0 241 274 119 0 chr10 101315897 101315981 -39000784 + L3 LINE CR1 865 958 -619 218 276 69 76 chr10 101316026 101316171 -39000594 + MIR3 SINE MIR 18 161 -47 303 213 88 0 chr10 101317095 101317175 -38999590 + MIR SINE MIR 69 155 -107 926 266 184 23 chr10 101317211 101317674 -38999091 - L2 LINE L2 -2 3311 2721 240 324 15 0 chr10 101317688 101317756 -38999009 + MIR SINE MIR 194 262 0 402 21 0 0 chr10 101319652 101319699 -38997066 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 232 274 81 107 chr10 101319806 101320003 -38996762 - MIR SINE MIR -51 211 20 544 287 155 0 chr10 101321493 101321667 -38995098 + MIR SINE MIR 14 214 -48 2144 128 3 0 chr10 101321877 101322183 -38994582 + AluSc SINE Alu 1 307 -2 383 191 22 164 chr10 101322248 101322333 -38994432 + MIR SINE MIR 93 140 -122 878 125 0 29 chr10 101322333 101322469 -38994296 + FLAM_C SINE Alu 2 133 0 383 191 22 164 chr10 101322469 101322566 -38994199 + MIR SINE MIR 140 249 -13 547 275 96 59 chr10 101323520 101323895 -38992870 + L1ME3A LINE L1 5567 5955 -215 2141 107 43 0 chr10 101324186 101324485 -38992280 + AluSx SINE Alu 1 312 0 245 346 148 12 chr10 101324597 101324759 -38992006 - MIR SINE MIR 0 262 79 306 369 90 12 chr10 101325167 101325498 -38991267 + L2 LINE L2 2717 3069 -203 462 287 63 0 chr10 101325773 101325916 -38990849 - MIR SINE MIR -37 225 74 1874 170 27 0 chr10 101325957 101326257 -38990508 - AluJb SINE Alu -2 310 3 21 36 0 0 chr10 101326406 101326434 -38990331 + AT_rich Low_complexity Low_complexity 1 28 0 2042 123 47 10 chr10 101326502 101326803 -38989962 - AluSq SINE Alu -1 312 1 2208 84 10 24 chr10 101326810 101327108 -38989657 - AluSp SINE Alu -6 307 14 1544 189 23 33 chr10 101327638 101327940 -38988825 + AluJb SINE Alu 1 299 -13 634 231 14 7 chr10 101328065 101328212 -38988553 + MIR SINE MIR 71 218 -44 190 151 377 19 chr10 101328272 101328325 -38988440 + L2 LINE L2 3182 3253 -19 183 282 200 77 chr10 101328383 101328723 -38988042 - L3 LINE CR1 -20 1557 1176 517 269 73 20 chr10 101329228 101329468 -38987297 + MIR SINE MIR 4 261 -1 217 132 19 19 chr10 101329473 101329526 -38987239 + GA-rich Low_complexity Low_complexity 3 55 0 310 306 31 0 chr10 101331284 101331382 -38985383 - MER5A DNA MER1_type -30 159 59 248 294 64 37 chr10 101331293 101331402 -38985363 + MER5A DNA MER1_type 50 161 -28 * 331 308 40 6 chr10 101331539 101331696 -38985069 - MIR SINE MIR -63 145 34 822 225 19 29 chr10 101332072 101332281 -38984484 + MIR SINE MIR 51 257 -5 462 36 0 0 chr10 101333293 101333349 -38983416 + (TA)n Simple_repeat Simple_repeat 1 56 0 470 310 76 0 chr10 101333403 101333587 -38983178 - MIR SINE MIR -18 244 47 312 262 39 19 chr10 101334048 101334151 -38982614 + MIR SINE MIR 155 259 -3 228 269 13 26 chr10 101334251 101334329 -38982436 + MIR SINE MIR 186 262 0 633 264 39 6 chr10 101334825 101335007 -38981758 - MIR SINE MIR -28 234 47 576 289 45 26 chr10 101335263 101335494 -38981271 - MIR SINE MIR -13 249 15 388 279 169 30 chr10 101335683 101335920 -38980845 - L2 LINE L2 -2 3270 3001 365 269 0 19 chr10 101336452 101336556 -38980209 - MIR SINE MIR -85 177 76 2200 107 0 10 chr10 101336902 101337193 -38979572 + AluSx SINE Alu 10 297 -15 422 292 9 9 chr10 101338155 101338268 -38978497 + MIR SINE MIR 19 131 -77 793 297 68 25 chr10 101338269 101338710 -38978055 + L1MC1 LINE L1 5295 5754 -2054 1473 129 9 5 chr10 101338735 101338952 -38977813 + AluJb SINE Alu 87 304 -8 2379 97 7 0 chr10 101338955 101339264 -38977501 + AluSx SINE Alu 1 311 -1 197 255 0 21 chr10 101340079 101340126 -38976639 + L2 LINE L2 3227 3272 0 2364 55 31 21 chr10 101340407 101340698 -38976067 + AluY SINE Alu 1 294 -17 463 284 55 27 chr10 101341135 101341318 -38975447 + MIR3 SINE MIR 21 208 0 589 300 39 39 chr10 101342371 101342519 -38974246 + MIR SINE MIR 3 153 -109 1965 128 64 0 chr10 101342519 101342800 -38973965 + AluSx SINE Alu 1 299 -13 589 300 39 39 chr10 101342800 101342911 -38973854 + MIR SINE MIR 152 262 0 2380 149 22 0 chr10 101343595 101343998 -38972767 + L1MB3 LINE L1 5578 5989 -194 1034 223 5 0 chr10 101343998 101344204 -38972561 + MIR SINE MIR 30 236 -26 502 292 128 13 chr10 101345154 101345380 -38971385 - MIR SINE MIR 0 262 11 2456 122 26 74 chr10 101346459 101346668 -38970097 + L1MB2 LINE L1 5694 5911 -260 813 102 8 0 chr10 101346668 101346786 -38969979 + FLAM_C SINE Alu 1 119 -14 2456 122 26 74 chr10 101346786 101347075 -38969690 + L1MB2 LINE L1 5911 6168 -3 878 185 97 19 chr10 101349524 101349740 -38967025 + L1MC1 LINE L1 6096 6328 -5 472 289 7 0 chr10 101349744 101349879 -38966886 + MER69 DNA AcHobo 4 139 -1087 186 103 0 0 chr10 101349916 101349945 -38966820 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 101350525 101350558 -38966207 + AT_rich Low_complexity Low_complexity 1 33 0 1410 158 5 5 chr10 101350928 101351204 -38965561 - AluJb SINE Alu 0 359 84 409 313 115 10 chr10 101351209 101351417 -38965348 - MIR SINE MIR -10 252 23 973 187 6 0 chr10 101351441 101351607 -38965158 - MER8 DNA MER2_type 0 239 73 772 318 107 36 chr10 101354542 101355038 -38961727 - L3 LINE CR1 -87 1490 1030 1167 109 0 0 chr10 101355038 101355212 -38961553 + (TATTG)n Simple_repeat Simple_repeat 4 177 0 1558 165 7 41 chr10 101355214 101355505 -38961260 - AluJo SINE Alu -31 281 1 772 318 107 36 chr10 101355505 101355586 -38961179 - L3 LINE CR1 -547 1030 869 4672 165 39 20 chr10 101355590 101357033 -38959732 + L1MB2 LINE L1 4696 6170 -1 2366 95 0 0 chr10 101357319 101357613 -38959152 + AluSx SINE Alu 1 294 -18 386 158 24 49 chr10 101358297 101358379 -38958386 - MIR SINE MIR -111 151 72 1797 120 93 0 chr10 101358526 101358818 -38957947 - AluSg SINE Alu 0 316 1 1957 202 34 11 chr10 101360410 101360855 -38955910 + L1MB4 LINE L1 5726 6180 0 555 293 77 27 chr10 101361430 101361652 -38955113 + MIR SINE MIR 4 236 -26 2149 143 0 3 chr10 101361691 101361991 -38954774 - AluJo SINE Alu -13 299 1 24 32 0 0 chr10 101362120 101362151 -38954614 + AT_rich Low_complexity Low_complexity 1 31 0 181 265 71 31 chr10 101362978 101363076 -38953689 - MER5B DNA MER1_type -39 139 38 * 367 289 25 33 chr10 101362991 101363112 -38953653 + MER5A DNA MER1_type 65 184 -5 268 230 40 14 chr10 101363138 101363212 -38953553 + MIR SINE MIR 32 107 -155 306 325 86 0 chr10 101363259 101363410 -38953355 - MER103 DNA DNA 0 166 3 221 286 8 95 chr10 101364524 101364650 -38952115 + L2 LINE L2 3155 3269 -3 244 316 50 0 chr10 101364695 101364834 -38951931 + (TAGG)n Simple_repeat Simple_repeat 2 147 0 * 465 249 40 28 chr10 101364771 101365016 -38951749 + (TGGG)n Simple_repeat Simple_repeat 1 247 0 366 292 80 0 chr10 101365091 101365228 -38951537 + MIR SINE MIR 89 236 -26 248 239 28 14 chr10 101365924 101365995 -38950770 - MIR SINE MIR -74 188 117 609 283 201 42 chr10 101366088 101366541 -38950224 - L1ME4a LINE L1 -5 6116 5592 246 356 58 0 chr10 101366551 101366638 -38950127 + MIR SINE MIR 42 133 -75 2020 157 3 0 chr10 101369707 101370006 -38946759 + AluJo SINE Alu 1 300 -12 595 315 125 4 chr10 101370403 101370635 -38946130 + L3 LINE CR1 1298 1557 -20 260 241 100 29 chr10 101371363 101371484 -38945281 + MIR SINE MIR 21 147 -62 2633 68 0 0 chr10 101371792 101372103 -38944662 + AluSx SINE Alu 1 311 -1 1121 153 28 0 chr10 101372128 101372305 -38944460 + AluSg/x SINE Alu 115 296 -14 687 186 38 82 chr10 101372315 101372498 -38944267 + AluJo SINE Alu 13 187 -125 276 146 0 0 chr10 101372498 101372539 -38944226 - MER2 DNA MER2_type -304 41 1 202 293 13 13 chr10 101373082 101373157 -38943608 - MIR SINE MIR 0 262 188 245 290 57 40 chr10 101373346 101373470 -38943295 - MIR SINE MIR -63 145 20 2109 112 0 14 chr10 101374118 101374438 -38942327 - AluSx SINE Alu 0 316 1 2493 64 0 3 chr10 101374908 101375203 -38941562 + AluSq SINE Alu 1 294 -19 542 236 147 11 chr10 101375226 101375417 -38941348 + MIR SINE MIR 18 234 -28 471 249 202 28 chr10 101375428 101375681 -38941084 - L1ME4a LINE L1 -9 6112 5816 435 260 89 41 chr10 101375706 101375741 -38941024 - L1ME4a LINE L1 -384 5737 5705 2269 108 0 10 chr10 101375741 101376046 -38940719 + AluSx SINE Alu 1 302 -10 435 260 89 41 chr10 101376046 101376179 -38940586 - L1ME4a LINE L1 -416 5705 5561 290 206 48 0 chr10 101378652 101378715 -38938050 + MIR SINE MIR 108 173 -89 2215 100 3 7 chr10 101379645 101379955 -38936810 + AluSq SINE Alu 1 309 -4 246 62 0 0 chr10 101379971 101380003 -38936762 + (GA)n Simple_repeat Simple_repeat 1 32 0 316 309 27 9 chr10 101380003 101380113 -38936652 + L1M4 LINE L1 3073 3184 -2962 419 306 88 6 chr10 101380223 101380393 -38936372 - MIR SINE MIR -78 184 1 2738 85 25 3 chr10 101381083 101381448 -38935317 + THE1C LTR MaLR 1 373 -2 247 303 18 28 chr10 101381517 101381626 -38935139 + HAL1b LINE L1 1237 1344 -4 234 289 81 6 chr10 101381694 101381867 -38934898 - L1ME4a LINE L1 -14 6107 5922 216 328 0 0 chr10 101381869 101381936 -38934829 - L2 LINE L2 -20 3252 3186 245 276 10 41 chr10 101382197 101382295 -38934470 - MIR SINE MIR -56 206 112 574 323 30 9 chr10 101383143 101383375 -38933390 - MIR SINE MIR -7 255 19 1018 276 0 4 chr10 101383579 101383811 -38932954 + MIR SINE MIR 12 242 -20 533 289 58 52 chr10 101384740 101384965 -38931800 + L2 LINE L2 2560 2789 -525 2144 108 3 0 chr10 101384965 101385260 -38931505 + AluSx SINE Alu 1 296 -16 533 289 58 52 chr10 101385260 101385377 -38931388 + L2 LINE L2 2789 2904 -410 1961 131 0 10 chr10 101385733 101386030 -38930735 - AluSx SINE Alu -18 294 1 395 286 40 24 chr10 101386077 101386203 -38930562 + L2 LINE L2 3185 3312 -1 1290 191 97 17 chr10 101386318 101386606 -38930159 + AluJo SINE Alu 1 311 -1 208 47 23 70 chr10 101386615 101386658 -38930107 + (GA)n Simple_repeat Simple_repeat 1 41 0 277 325 56 8 chr10 101386953 101387079 -38929686 - MIR SINE MIR -29 233 102 795 113 0 0 chr10 101387175 101387281 -38929484 - AluJb SINE Alu -10 302 197 423 245 0 20 chr10 101387890 101387988 -38928777 + L2 LINE L2 3201 3296 -17 203 216 0 0 chr10 101387956 101387993 -38928772 + MIR SINE MIR 220 256 -6 * 425 312 53 24 chr10 101388361 101388531 -38928234 - MIR SINE MIR -68 194 20 25 0 0 0 chr10 101388531 101388556 -38928209 + AT_rich Low_complexity Low_complexity 1 25 0 3855 146 54 30 chr10 101388557 101389263 -38927502 - L1MB2 LINE L1 -2 6169 5447 495 280 50 28 chr10 101389767 101389955 -38926810 + MIR SINE MIR 13 208 -54 256 317 42 35 chr10 101390679 101390821 -38925944 + MER5A DNA MER1_type 47 189 0 644 183 76 0 chr10 101391160 101391291 -38925474 - MLT1D LTR MaLR 0 505 365 421 148 0 12 chr10 101391291 101391372 -38925393 + L1PA16 LINE L1 5751 5830 -336 * 2443 232 51 28 chr10 101391352 101391372 -38925393 + L1MC4 LINE L1 7068 7086 -956 2103 96 3 3 chr10 101391372 101391688 -38925077 + AluSq SINE Alu 1 316 0 2443 232 51 28 chr10 101391688 101392474 -38924291 + L1MC4 LINE L1 7086 7939 -103 24 77 0 0 chr10 101392535 101392587 -38924178 + AT_rich Low_complexity Low_complexity 1 52 0 404 116 14 0 chr10 101392916 101392985 -38923780 - L1MD3 LINE L1 -81 7914 7845 827 136 8 0 chr10 101392988 101393106 -38923659 + FLAM_A SINE Alu 4 122 -11 549 301 75 12 chr10 101393106 101393279 -38923486 - MIR SINE MIR -71 191 8 653 258 0 19 chr10 101393910 101394069 -38922696 - MIR SINE MIR 0 262 107 203 234 306 45 chr10 101394134 101394245 -38922520 + L2 LINE L2 3133 3272 0 * 321 222 28 18 chr10 101394235 101394330 -38922435 - MIR SINE MIR -75 133 28 233 265 73 0 chr10 101394672 101394782 -38921983 - MIR SINE MIR -36 226 106 950 122 0 7 chr10 101395237 101395376 -38921389 + FLAM_C SINE Alu 1 138 -5 887 108 0 8 chr10 101396529 101396658 -38920107 + FLAM_C SINE Alu 15 142 -1 192 319 111 56 chr10 101396705 101396993 -38919772 + L2 LINE L2 2928 3231 -41 653 214 124 30 chr10 101397046 101397280 -38919485 - MIR SINE MIR 0 262 7 518 86 12 0 chr10 101397654 101397735 -38919030 + (CA)n Simple_repeat Simple_repeat 2 83 0 201 108 0 0 chr10 101398240 101398277 -38918488 + (CA)n Simple_repeat Simple_repeat 2 38 0 197 83 28 0 chr10 101399672 101399708 -38917057 + (CA)n Simple_repeat Simple_repeat 1 37 0 342 0 0 0 chr10 101399943 101399981 -38916784 + (CA)n Simple_repeat Simple_repeat 2 39 0 424 351 66 54 chr10 101402545 101402987 -38913778 - L2 LINE L2 -7 3265 2819 1024 183 0 0 chr10 101403209 101403389 -38913376 - AluJo SINE Alu -13 299 120 187 351 47 27 chr10 101403438 101403586 -38913179 - MER5A DNA MER1_type -35 154 4 271 312 80 0 chr10 101403775 101403900 -38912865 - MIR3 SINE MIR -13 195 61 215 269 0 0 chr10 101404306 101404358 -38912407 - L2 LINE L2 0 3272 3221 4031 243 43 44 chr10 101404375 101404677 -38912088 - L1MEc LINE L1 -5020 1376 1075 2046 120 7 0 chr10 101404677 101404968 -38911797 - AluSx SINE Alu -14 298 6 4031 243 43 44 chr10 101404968 101405210 -38911555 - L1MEc LINE L1 -5321 1075 834 1717 116 91 38 chr10 101405210 101405528 -38911237 - MER44D DNA MER2_type -2 607 3 4031 243 43 44 chr10 101405528 101406323 -38910442 - L1MEc LINE L1 -5562 834 37 275 283 197 0 chr10 101406450 101406602 -38910163 + L2 LINE L2 2871 3052 -261 209 259 54 0 chr10 101406806 101406972 -38909793 + (CACCAT)n Simple_repeat Simple_repeat 3 177 0 * 221 305 54 0 chr10 101406852 101407019 -38909746 + C-rich Low_complexity Low_complexity 1 176 0 312 243 231 46 chr10 101407136 101407309 -38909456 - MIR SINE MIR -5 257 53 210 267 17 17 chr10 101407322 101407382 -38909383 + MIR SINE MIR 153 212 -50 2054 142 0 0 chr10 101407387 101407698 -38909067 + AluJb SINE Alu 1 311 -1 2102 109 3 26 chr10 101407701 101408034 -38908731 + AluSq SINE Alu 1 313 0 439 250 141 16 chr10 101408404 101408532 -38908233 + L1ME4a LINE L1 5973 6116 -5 2146 112 0 3 chr10 101408691 101408996 -38907769 + AluSx SINE Alu 1 304 -8 1211 191 23 8 chr10 101409004 101409261 -38907504 + L1MB4 LINE L1 5920 6180 0 251 320 74 16 chr10 101409352 101409474 -38907291 - MIR SINE MIR -130 132 4 204 297 117 31 chr10 101409540 101409668 -38907097 - MIR SINE MIR -89 173 35 300 242 42 33 chr10 101410336 101410456 -38906309 - MIR3 SINE MIR -25 183 63 286 242 0 71 chr10 101410524 101410623 -38906142 + L2 LINE L2 3221 3312 -1 1835 161 13 0 chr10 101411463 101411761 -38905004 + AluJb SINE Alu 1 302 -10 255 241 0 0 chr10 101412043 101412126 -38904639 + (TA)n Simple_repeat Simple_repeat 2 84 0 1703 204 66 79 chr10 101412126 101412656 -38904109 + L1ME3 LINE L1 5639 6161 -1 233 316 37 66 chr10 101413436 101413462 -38903303 - MIR SINE MIR -59 149 124 2113 103 10 0 chr10 101413462 101413753 -38903012 + AluSx SINE Alu 1 294 -18 2099 129 0 3 chr10 101413756 101414066 -38902699 + AluSq SINE Alu 2 310 -3 233 316 37 66 chr10 101414066 101414171 -38902594 - MIR SINE MIR -86 122 18 281 192 50 71 chr10 101414193 101414292 -38902473 - HAL1 LINE L1 0 2507 2411 1498 169 4 8 chr10 101414315 101414581 -38902184 - AluJb SINE Alu 0 312 48 553 168 0 0 chr10 101414581 101414676 -38902089 + AluJ/FRAM SINE Alu 217 311 -1 565 192 67 122 chr10 101414728 101414983 -38901782 + L1MC5 LINE L1 7121 7361 -600 1074 149 26 10 chr10 101414983 101415177 -38901588 - Tigger1 DNA MER2_type 0 2418 2222 419 131 49 0 chr10 101415178 101415239 -38901526 + AluS SINE Alu 2 65 -248 496 308 19 13 chr10 101415262 101415418 -38901347 + L2 LINE L2 3116 3272 0 2088 101 49 0 chr10 101415600 101415888 -38900877 + AluSx SINE Alu 1 302 -10 1659 143 54 4 chr10 101416044 101416323 -38900442 - AluJb SINE Alu -19 293 1 323 259 9 54 chr10 101416437 101416549 -38900216 - L2 LINE L2 0 3272 3166 280 54 0 0 chr10 101416652 101416689 -38900076 - AluJb SINE Alu -177 125 89 417 181 32 21 chr10 101416689 101416783 -38899982 + L1MB2 LINE L1 6074 6168 -3 1017 251 159 22 chr10 101417057 101417427 -38899338 + MLT1L LTR MaLR 186 606 -9 346 329 45 10 chr10 101417433 101417648 -38899117 - MIR SINE MIR -4 258 34 299 304 122 23 chr10 101417782 101417996 -38898769 - MLT1K LTR MaLR -158 430 196 414 231 61 41 chr10 101417997 101418144 -38898621 + MIR SINE MIR 52 201 -61 * 573 302 21 26 chr10 101418125 101418317 -38898448 - L2 LINE L2 0 3313 3123 521 241 17 0 chr10 101419433 101419549 -38897216 - L2 LINE L2 -33 3239 3122 1830 149 17 0 chr10 101419572 101419874 -38896891 + AluJb SINE Alu 1 307 -5 569 246 62 54 chr10 101420274 101420550 -38896215 - L1MC5 LINE L1 -24 7937 7660 255 232 170 18 chr10 101420564 101420676 -38896089 - L1ME LINE L1 -503 5618 5490 848 161 52 7 chr10 101421481 101421636 -38895129 + FRAM SINE Alu 1 161 -15 297 350 40 54 chr10 101421675 101421952 -38894813 - L2 LINE L2 -23 3249 2977 869 163 5 60 chr10 101422003 101422128 -38894637 - L1M4 LINE L1 -750 5396 5286 1659 157 27 27 chr10 101422128 101422422 -38894343 + AluJo SINE Alu 1 294 -18 869 163 5 60 chr10 101422422 101422511 -38894254 - L1M4 LINE L1 -860 5286 5194 2008 91 4 11 chr10 101422606 101422882 -38893883 + AluSx SINE Alu 1 274 -38 962 239 9 35 chr10 101422882 101423108 -38893657 - HERVL LTR ERVL -1173 4481 4262 392 294 22 15 chr10 101423309 101423445 -38893320 + MIR3 SINE MIR 5 141 -67 2371 86 0 0 chr10 101423558 101423862 -38892903 + AluSx SINE Alu 1 304 -8 1366 208 42 25 chr10 101423867 101424228 -38892537 + MER97c DNA MER1_type? 67 433 -657 691 179 14 7 chr10 101424429 101424569 -38892196 + MER33 DNA MER1_type 37 177 -147 336 311 59 0 chr10 101424686 101424805 -38891960 + MIR SINE MIR 93 218 -44 671 234 105 0 chr10 101425217 101425388 -38891377 + MER5A DNA MER1_type 1 189 0 2439 68 0 3 chr10 101425408 101425718 -38891047 + AluY SINE Alu 2 310 -1 1684 184 0 3 chr10 101425963 101426262 -38890503 + AluJo SINE Alu 5 302 -10 2050 102 41 0 chr10 101426370 101426506 -38890259 + AluSx SINE Alu 3 132 -180 1954 87 11 0 chr10 101426506 101426770 -38889995 + AluSp SINE Alu 1 267 -46 2050 102 41 0 chr10 101426770 101426926 -38889839 + AluSx SINE Alu 132 307 -5 278 306 74 0 chr10 101427366 101427474 -38889291 - L2 LINE L2 -17 3255 3141 752 191 18 36 chr10 101427620 101427788 -38888977 + L1ME2 LINE L1 5943 6107 -57 2152 108 0 10 chr10 101427788 101428084 -38888681 + AluSx SINE Alu 1 293 -19 1380 178 48 7 chr10 101429032 101429325 -38887440 - MER33 DNA MER1_type -18 306 2 302 250 73 16 chr10 101429818 101429847 -38886918 + MIR SINE MIR 129 155 -107 1776 130 82 62 chr10 101429847 101430002 -38886763 + THE1C LTR MaLR 1 152 -223 2028 147 7 0 chr10 101430002 101430301 -38886464 - AluSx SINE Alu -11 301 1 1776 130 82 62 chr10 101430301 101430513 -38886252 + THE1C LTR MaLR 152 375 0 302 250 73 16 chr10 101430513 101430607 -38886158 + MIR SINE MIR 155 259 -3 430 61 197 0 chr10 101431028 101431094 -38885671 - MADE1 DNA Mariner -1 79 1 740 146 54 130 chr10 101431637 101431822 -38884943 + FAM SINE Alu 1 171 -4 1926 153 13 0 chr10 101432118 101432291 -38884474 - AluJb SINE Alu -8 304 124 351 0 0 0 chr10 101432291 101432330 -38884435 + (TG)n Simple_repeat Simple_repeat 2 40 0 1926 153 13 0 chr10 101432330 101432456 -38884309 - AluJb SINE Alu -188 124 1 225 94 0 0 chr10 101432544 101432576 -38884189 + (TG)n Simple_repeat Simple_repeat 2 33 0 180 0 0 0 chr10 101432576 101432596 -38884169 + (TA)n Simple_repeat Simple_repeat 2 21 0 2599 121 59 12 chr10 101432618 101433023 -38883742 + Tigger2a DNA MER2_type 11 434 0 279 79 0 0 chr10 101433373 101433411 -38883354 + (T)n Simple_repeat Simple_repeat 1 38 0 2182 108 23 13 chr10 101433637 101433972 -38882793 - AluSx SINE Alu 0 312 1 327 204 136 0 chr10 101434663 101434751 -38882014 - MIR SINE MIR -96 166 67 2063 138 0 0 chr10 101434756 101435054 -38881711 + AluJb SINE Alu 1 298 -14 1938 179 22 30 chr10 101435058 101435426 -38881339 + MLT1A1 LTR MaLR 1 365 0 225 250 17 17 chr10 101438961 101439021 -38877744 + GA-rich Low_complexity Low_complexity 2 61 0 495 263 127 35 chr10 101439952 101440180 -38876585 - MIR SINE MIR -2 260 12 229 328 0 0 chr10 101440428 101440492 -38876273 - L2 LINE L2 -217 3055 2992 1106 184 27 45 chr10 101440533 101440756 -38876009 + MER20 DNA MER1_type 1 219 0 236 314 17 68 chr10 101442028 101442146 -38874619 - MIR SINE MIR -65 197 86 313 290 60 10 chr10 101442525 101442625 -38874140 + L2 LINE L2 3204 3308 -5 2082 115 33 10 chr10 101444405 101444710 -38872055 + AluSx SINE Alu 1 312 0 5316 138 20 40 chr10 101444903 101445776 -38870989 - L1MB3 LINE L1 0 6183 5328 2448 94 0 0 chr10 101445776 101446084 -38870681 - AluY SINE Alu -3 308 1 5316 138 20 40 chr10 101446084 101446228 -38870537 - L1MB3 LINE L1 -855 5328 5183 1534 172 10 41 chr10 101446395 101446487 -38870278 + AluJo SINE Alu 4 97 -208 2181 103 7 3 chr10 101446487 101446778 -38869987 + AluSx SINE Alu 1 292 -20 1534 172 10 41 chr10 101446778 101446996 -38869769 + AluJo SINE Alu 97 305 0 203 246 0 0 chr10 101447093 101447133 -38869632 + A-rich Low_complexity Low_complexity 1 40 -17 2259 60 35 51 chr10 101447133 101447207 -38869558 + L1PA10 LINE L1 5859 5933 -235 2240 103 0 0 chr10 101447207 101447499 -38869266 + AluSx SINE Alu 1 292 -20 2259 60 35 51 chr10 101447499 101447606 -38869159 + L1PA10 LINE L1 5933 6040 -128 2158 127 0 7 chr10 101447606 101447913 -38868852 + AluSq SINE Alu 1 305 -8 2259 60 35 51 chr10 101447913 101448045 -38868720 + L1PA10 LINE L1 6040 6168 0 203 246 0 0 chr10 101448045 101448061 -38868704 + A-rich Low_complexity Low_complexity 39 57 0 310 279 13 0 chr10 101449162 101449241 -38867524 - MIR SINE MIR -109 153 74 2125 99 3 3 chr10 101449616 101449898 -38866867 - AluSx SINE Alu -30 282 1 248 275 33 22 chr10 101450155 101450246 -38866519 + L1ME LINE L1 5522 5613 -508 1144 93 66 44 chr10 101450265 101450447 -38866318 + AluJb SINE Alu 121 306 -6 564 198 56 56 chr10 101450448 101450604 -38866161 + L1MC5 LINE L1 7271 7429 -532 1996 157 3 0 chr10 101450604 101450904 -38865861 + AluJb SINE Alu 1 301 -11 564 198 56 56 chr10 101450904 101450944 -38865821 + L1MC5 LINE L1 7428 7467 -494 7618 116 35 45 chr10 101450955 101451210 -38865555 + Tigger3b DNA MER2_type 2 258 -2770 2208 135 0 0 chr10 101451210 101451522 -38865243 + AluSx SINE Alu 1 312 0 7618 116 35 45 chr10 101451522 101451830 -38864935 + Tigger3b DNA MER2_type 258 568 -2460 1637 146 13 52 chr10 101451830 101452139 -38864626 - AluJo SINE Alu -15 297 1 7618 116 35 45 chr10 101452139 101452816 -38863949 + Tigger3b DNA MER2_type 568 1230 -1 2315 70 3 35 chr10 101452834 101453148 -38863617 + AluSc SINE Alu 1 304 -5 378 0 0 0 chr10 101453170 101453212 -38863553 + (TG)n Simple_repeat Simple_repeat 2 43 0 405 183 114 53 chr10 101453212 101453343 -38863422 + L1MD3 LINE L1 7730 7868 -127 1603 180 42 42 chr10 101453505 101453607 -38863158 + L1MC4a LINE L1 5321 5422 -762 2347 87 3 3 chr10 101453607 101453918 -38862847 + AluY SINE Alu 1 311 0 1603 180 42 42 chr10 101453918 101454170 -38862595 + L1MC4a LINE L1 5421 5675 -509 936 117 0 35 chr10 101454170 101454315 -38862450 + FLAM_C SINE Alu 1 140 -3 356 327 83 5 chr10 101455225 101455430 -38861335 + L1MC4a LINE L1 5798 6018 -1790 736 169 57 0 chr10 101455430 101455554 -38861211 + FLAM_C SINE Alu 3 133 0 29 0 0 0 chr10 101455710 101455739 -38861026 + AT_rich Low_complexity Low_complexity 1 29 0 2235 93 4 0 chr10 101455743 101456046 -38860719 + AluSg SINE Alu 1 304 0 1614 171 18 7 chr10 101456196 101456471 -38860294 + AluJb SINE Alu 5 282 -30 1924 158 0 3 chr10 101457528 101457826 -38858939 + AluJb SINE Alu 1 297 -15 1803 157 10 10 chr10 101458578 101458872 -38857893 + AluJo SINE Alu 1 294 -18 2591 109 43 3 chr10 101459942 101460292 -38856473 - THE1B LTR MaLR 0 364 1 11022 99 50 17 chr10 101460292 101461821 -38854944 - THE1B-int LTR MaLR 0 1580 1 2871 93 3 6 chr10 101461821 101462186 -38854579 - THE1B LTR MaLR 0 364 1 202 274 16 48 chr10 101463515 101463639 -38853126 + T-rich Low_complexity Low_complexity 5 124 0 265 235 102 27 chr10 101464328 101464515 -38852250 + L1M4 LINE L1 4957 5157 -989 237 65 0 0 chr10 101464682 101464713 -38852052 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 364 270 74 8 chr10 101464719 101464965 -38851800 + L1P5 LINE L1 5171 5431 -723 569 172 0 11 chr10 101465042 101465135 -38851630 - AluSg/x SINE Alu -15 297 206 183 100 0 0 chr10 101465143 101465173 -38851592 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1870 233 99 53 chr10 101465175 101465490 -38851275 - L1M4 LINE L1 -2196 3950 3651 1813 145 55 3 chr10 101465490 101465779 -38850986 - AluSx SINE Alu -8 304 1 1870 233 99 53 chr10 101465779 101466194 -38850571 - L1M4 LINE L1 -2495 3651 3257 2610 46 0 0 chr10 101466194 101466498 -38850267 - AluY SINE Alu -7 304 1 1870 233 99 53 chr10 101466498 101466520 -38850245 - L1M4 LINE L1 -2889 3257 3237 2204 136 0 0 chr10 101466520 101466821 -38849944 - AluSx SINE Alu -11 301 1 1870 233 99 53 chr10 101466821 101466842 -38849923 - L1M4 LINE L1 -2909 3237 3139 2166 138 0 0 chr10 101466843 101467147 -38849618 - AluSx SINE Alu -8 304 1 458 229 154 15 chr10 101467169 101467314 -38849451 + L1ME3A LINE L1 5724 5906 -264 309 68 0 0 chr10 101467314 101467358 -38849407 + (CA)n Simple_repeat Simple_repeat 1 44 0 458 229 154 15 chr10 101467358 101467413 -38849352 + L1ME3A LINE L1 5906 5952 -218 2317 92 0 3 chr10 101467542 101467836 -38848929 + AluSg SINE Alu 1 293 -17 256 218 58 23 chr10 101467902 101467989 -38848776 + L1MC4 LINE L1 7927 8016 -26 180 0 0 0 chr10 101470319 101470339 -38846426 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1466 183 22 11 chr10 101470344 101470617 -38846148 - AluJo SINE Alu -36 276 1 2163 127 0 13 chr10 101470952 101471268 -38845497 + AluSx SINE Alu 1 312 0 1421 183 33 29 chr10 101471404 101471710 -38845055 - AluJo SINE Alu -5 307 1 1463 194 0 67 chr10 101471928 101472242 -38844523 + AluJb SINE Alu 1 293 -19 185 237 85 0 chr10 101472633 101472692 -38844073 - L2 LINE L2 -244 3028 2965 1139 285 128 39 chr10 101472828 101473365 -38843400 + MLT1K LTR MaLR 2 586 -2 575 219 101 73 chr10 101473438 101473657 -38843108 + LTR41 LTR ERVL 517 741 -32 2346 99 3 0 chr10 101473657 101473969 -38842796 - AluSp SINE Alu 0 313 1 273 111 333 0 chr10 101473970 101474033 -38842732 + L1MD3 LINE L1 7834 7917 -78 272 206 58 130 chr10 101474219 101474332 -38842433 + L1ME4a LINE L1 5711 5802 -319 1974 148 3 0 chr10 101474332 101474623 -38842142 + AluSx SINE Alu 1 292 -20 272 206 58 130 chr10 101474623 101474732 -38842033 + L1ME4a LINE L1 5802 5917 -204 641 196 52 29 chr10 101474785 101474958 -38841807 + L1ME4a LINE L1 5945 6121 0 1935 94 0 16 chr10 101475001 101475256 -38841509 + AluSx SINE Alu 1 251 -61 365 145 3 0 chr10 101475300 101475368 -38841397 + Alu SINE Alu 242 295 -5 2143 119 7 0 chr10 101475395 101475688 -38841077 + AluSx SINE Alu 1 295 -17 2347 87 0 6 chr10 101475690 101476027 -38840738 + AluY SINE Alu 1 311 0 2566 65 0 25 chr10 101476285 101476468 -38840297 - AluSp SINE Alu 0 313 127 216 0 0 0 chr10 101476468 101476492 -38840273 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2210 108 0 3 chr10 101476492 101476778 -38839987 - AluSp SINE Alu -28 285 1 2566 65 0 25 chr10 101476778 101476914 -38839851 - AluSp SINE Alu -184 129 1 190 376 99 0 chr10 101477144 101477245 -38839520 - L2 LINE L2 -18 3254 3144 209 320 117 0 chr10 101477508 101477611 -38839154 - MIR SINE MIR -43 219 105 274 281 104 85 chr10 101478399 101478563 -38838202 - MIR SINE MIR -60 202 36 488 139 59 10 chr10 101478864 101478965 -38837800 - MER50 LTR ERV1 -130 604 499 1738 174 0 3 chr10 101478970 101479269 -38837496 - AluSx SINE Alu -12 300 3 827 161 0 0 chr10 101479978 101480102 -38836663 - AluSq/x SINE Alu -187 125 2 1607 120 113 4 chr10 101480140 101480414 -38836351 + AluJb SINE Alu 1 304 -8 621 185 141 22 chr10 101480732 101480867 -38835898 - AluJb SINE Alu -21 291 141 1657 134 3 38 chr10 101481533 101481658 -38835107 + AluJo SINE Alu 19 147 -165 2219 93 3 0 chr10 101481658 101481958 -38834807 + AluSq SINE Alu 7 307 -6 1657 134 3 38 chr10 101481958 101482124 -38834641 + AluJo SINE Alu 147 300 -12 717 294 110 14 chr10 101482165 101482447 -38834318 + L1MC4a LINE L1 5521 5829 -1979 220 185 15 31 chr10 101482454 101482519 -38834246 + GA-rich Low_complexity Low_complexity 5 68 0 438 258 98 36 chr10 101482522 101482716 -38834049 + L1MC4a LINE L1 5815 6020 -1788 1490 91 5 0 chr10 101482763 101482962 -38833803 - AluSg/x SINE Alu -12 298 99 1646 127 19 0 chr10 101482966 101483226 -38833539 + AluJb SINE Alu 37 301 -11 796 269 164 3 chr10 101483245 101483613 -38833152 + L1MC4 LINE L1 6499 7000 -893 189 0 0 0 chr10 101483614 101483635 -38833130 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1165 146 5 5 chr10 101483635 101483827 -38832938 - AluJb SINE Alu -32 280 89 1044 245 128 101 chr10 101483856 101484592 -38832173 + L1MC4 LINE L1 7026 7797 -245 2232 59 48 0 chr10 101484592 101484881 -38831884 - AluY SINE Alu -8 303 1 1044 245 128 101 chr10 101484881 101485132 -38831633 + L1MC4 LINE L1 7797 8040 -2 2125 95 27 0 chr10 101485178 101485474 -38831291 - AluSx SINE Alu -8 304 1 972 148 112 0 chr10 101486014 101486183 -38830582 + AluJo SINE Alu 96 283 -29 4888 101 18 72 chr10 101486183 101486201 -38830564 + L1MA4A LINE L1 5476 5493 -810 2433 58 3 7 chr10 101486201 101486509 -38830256 + AluY SINE Alu 3 309 -2 4888 101 18 72 chr10 101486509 101486965 -38829800 + L1MA4A LINE L1 5493 5884 -419 1893 125 38 3 chr10 101486965 101487254 -38829511 + AluSq SINE Alu 1 299 -14 4888 101 18 72 chr10 101487254 101487647 -38829118 + L1MA4A LINE L1 5884 6297 -6 579 99 33 11 chr10 101487654 101487745 -38829020 + Tigger7 DNA MER2_type 433 525 -208 * 580 170 0 21 chr10 101487739 101487833 -38828932 + Tigger7 DNA MER2_type 2496 2587 0 3237 209 24 42 chr10 101487833 101488675 -38828090 + L1MB3 LINE L1 4450 5276 -870 2553 142 21 2 chr10 101488675 101489104 -38827661 + L1MB3 LINE L1 5746 6182 -1 336 214 0 29 chr10 101489104 101489167 -38827598 + MLT1-int LTR MaLR 551 613 -758 1722 134 14 7 chr10 101489167 101489444 -38827321 + AluJb SINE Alu 13 291 -21 457 307 28 11 chr10 101489663 101489839 -38826926 + MLT1-int LTR MaLR 699 877 -494 2276 61 0 0 chr10 101490700 101491011 -38825754 + AluY SINE Alu 3 313 0 1704 138 0 58 chr10 101491141 101491452 -38825313 - AluJo SINE Alu -8 304 12 275 227 9 118 chr10 101491726 101491782 -38824983 - MIR SINE MIR -67 195 155 1256 136 5 23 chr10 101491782 101491996 -38824769 + MER6B DNA MER2_type 1 210 0 275 227 9 118 chr10 101491996 101492049 -38824716 - MIR SINE MIR -107 155 98 1911 127 0 27 chr10 101492101 101492401 -38824364 + AluSx SINE Alu 1 292 -20 487 198 0 0 chr10 101492552 101492638 -38824127 + AluJ/FRAM SINE Alu 216 301 -11 1645 140 0 7 chr10 101493686 101493993 -38822772 - AluY SINE Alu 0 316 12 874 183 12 0 chr10 101494118 101494287 -38822478 + AluSg/x SINE Alu 126 296 -16 779 167 8 15 chr10 101494434 101494566 -38822199 + FLAM_C SINE Alu 3 133 0 1068 165 11 0 chr10 101494641 101494823 -38821942 - FRAM SINE Alu 0 176 1 2036 130 0 0 chr10 101494830 101495131 -38821634 - AluSx SINE Alu 0 312 12 1545 183 7 4 chr10 101495239 101495518 -38821247 - AluJb SINE Alu -24 288 9 2198 107 0 3 chr10 101495575 101495884 -38820881 - AluSx SINE Alu -4 308 1 889 192 23 6 chr10 101496051 101496223 -38820542 - FRAM SINE Alu -8 168 1 2208 99 6 3 chr10 101496227 101496539 -38820226 - AluSq SINE Alu 0 313 1 196 345 113 10 chr10 101496656 101496859 -38819906 - L3 LINE CR1 -775 802 579 2055 118 0 0 chr10 101497029 101497317 -38819448 + AluSx SINE Alu 1 288 -24 1550 173 22 29 chr10 101497656 101497969 -38818796 - AluJb SINE Alu 0 312 2 1703 179 0 3 chr10 101498179 101498470 -38818295 + AluJo SINE Alu 1 290 -22 21 36 0 0 chr10 101498472 101498500 -38818265 + AT_rich Low_complexity Low_complexity 1 28 0 2192 81 3 0 chr10 101498500 101498805 -38817960 + AluSp SINE Alu 1 306 0 2173 110 0 3 chr10 101499019 101499329 -38817436 + AluSc SINE Alu 1 309 0 2229 91 0 10 chr10 101499529 101499836 -38816929 - AluY SINE Alu -7 304 1 1971 121 7 3 chr10 101499836 101500133 -38816632 - AluSx SINE Alu -13 299 1 1629 146 9 61 chr10 101500273 101500602 -38816163 + AluJb SINE Alu 1 312 0 3934 72 2 51 chr10 101500811 101501363 -38815402 + LTR17 LTR ERV1 256 780 0 2291 49 0 0 chr10 101501393 101501659 -38815106 + HERV17 LTR ERV1 8361 8626 0 2515 46 28 31 chr10 101501659 101501984 -38814781 + LTR17 LTR ERV1 1 324 -456 185 0 0 39 chr10 101501984 101502010 -38814755 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1787 101 98 0 chr10 101502037 101502313 -38814452 - AluSx SINE Alu -9 303 1 411 272 72 44 chr10 101502703 101502883 -38813882 - MIR SINE MIR -10 252 68 509 143 0 0 chr10 101503746 101503837 -38812928 + L1PA16 LINE L1 6072 6162 -4 25 31 0 0 chr10 101503837 101503869 -38812896 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr10 101503979 101504020 -38812745 + AT_rich Low_complexity Low_complexity 1 41 0 871 157 0 0 chr10 101504023 101504163 -38812602 - FLAM_C SINE Alu -3 140 1 358 133 0 0 chr10 101504359 101504419 -38812346 - AluJb SINE Alu 0 302 243 426 169 0 0 chr10 101504430 101504501 -38812264 - AluJb SINE Alu -157 155 85 471 274 196 45 chr10 101504886 101505218 -38811547 + L2 LINE L2 2923 3304 -9 867 221 0 0 chr10 101505323 101505486 -38811279 + FRAM SINE Alu 1 163 -13 1833 161 7 0 chr10 101505528 101505827 -38810938 - AluSx SINE Alu -11 301 1 659 148 35 0 chr10 101505953 101506068 -38810697 + AluJb SINE Alu 193 311 -1 2075 114 7 10 chr10 101506076 101506384 -38810381 + AluSx SINE Alu 1 307 -5 2096 123 3 0 chr10 101506384 101506693 -38810072 + AluSx SINE Alu 1 310 -2 2156 105 0 0 chr10 101506947 101507243 -38809522 - AluSx SINE Alu -16 296 1 764 221 67 71 chr10 101507420 101507606 -38809159 + MIR SINE MIR 3 189 -73 2417 66 3 0 chr10 101507606 101507909 -38808856 + AluSp SINE Alu 1 304 -9 764 221 67 71 chr10 101507909 101507975 -38808790 + MIR SINE MIR 189 254 -8 2027 94 40 10 chr10 101508009 101508306 -38808459 + AluSg SINE Alu 1 306 -4 1259 171 85 11 chr10 101508331 101508612 -38808153 + 7SLRNA srpRNA srpRNA 13 314 -6 811 114 0 0 chr10 101508622 101508745 -38808020 + AluY SINE Alu 173 295 -16 605 163 0 0 chr10 101508750 101508848 -38807917 + 7SLRNA srpRNA srpRNA 223 320 0 210 312 78 0 chr10 101509466 101509543 -38807222 + L2 LINE L2 3137 3219 -53 2014 113 0 17 chr10 101509749 101510042 -38806723 - AluSx SINE Alu -14 298 11 2298 47 4 0 chr10 101510196 101510508 -38806257 + AluY SINE Alu 1 313 0 1712 138 0 58 chr10 101510638 101510950 -38805815 - AluJo SINE Alu -7 305 12 275 227 9 118 chr10 101511224 101511280 -38805485 - MIR SINE MIR -67 195 155 1256 136 5 23 chr10 101511280 101511494 -38805271 + MER6B DNA MER2_type 1 210 0 275 227 9 118 chr10 101511494 101511547 -38805218 - MIR SINE MIR -107 155 98 1911 127 0 27 chr10 101511599 101511899 -38804866 + AluSx SINE Alu 1 292 -20 487 198 0 0 chr10 101512050 101512136 -38804629 + AluJ/FRAM SINE Alu 216 301 -11 1293 112 0 5 chr10 101513185 101513399 -38803366 - AluSg/x SINE Alu 0 307 95 593 108 236 108 chr10 101515889 101516009 -38800756 - MSTC LTR MaLR -251 177 31 1814 134 3 39 chr10 101516009 101516315 -38800450 - AluSx SINE Alu -17 295 1 593 108 236 108 chr10 101516315 101516351 -38800414 - MSTC LTR MaLR -397 31 1 1835 90 0 22 chr10 101516974 101517241 -38799524 - AluSq SINE Alu 0 313 53 250 303 15 23 chr10 101517698 101517830 -38798935 + L1MC/D LINE L1 5737 5867 -1941 2124 115 0 3 chr10 101517891 101518187 -38798578 - AluSx SINE Alu -15 297 3 7057 54 14 1 chr10 101518295 101519856 -38796909 + L1PA5 LINE L1 4583 6154 0 552 88 0 25 chr10 101519884 101519964 -38796801 + MER9 LTR ERVK 358 435 -76 3404 104 0 0 chr10 101519978 101520449 -38796316 + L1P LINE L1 3867 4337 -1809 208 347 10 31 chr10 101520924 101521022 -38795743 - MIR SINE MIR -39 223 128 564 195 57 0 chr10 101521597 101521720 -38795045 - MIR SINE MIR -85 177 48 212 275 0 50 chr10 101523292 101523372 -38793393 + A-rich Low_complexity Low_complexity 3 78 0 668 269 75 35 chr10 101524326 101524553 -38792212 - MIR SINE MIR -7 255 20 1501 179 42 6 chr10 101524890 101525203 -38791562 - MER33 DNA MER1_type 0 324 1 1988 142 0 0 chr10 101525371 101525667 -38791098 - AluSx SINE Alu -16 296 1 231 246 46 138 chr10 101525754 101525884 -38790881 + MIR3 SINE MIR 73 190 -18 353 320 23 8 chr10 101525899 101526027 -38790738 + MER117 DNA MER1_type 15 144 -53 2221 110 0 0 chr10 101526475 101526785 -38789980 - AluSg SINE Alu 0 310 1 1221 162 23 9 chr10 101526856 101527072 -38789693 - MER20 DNA MER1_type 0 219 1 261 186 136 17 chr10 101527080 101527139 -38789626 - MER58 DNA MER1_type 0 2420 2355 2184 99 3 6 chr10 101527141 101527453 -38789312 - AluSx SINE Alu -1 311 1 763 222 34 11 chr10 101527533 101527709 -38789056 + L1ME2 LINE L1 5527 5706 -458 462 104 0 26 chr10 101527711 101527788 -38788977 - AluJ/FRAM SINE Alu -13 299 225 1439 201 19 81 chr10 101527789 101528222 -38788543 + L1ME2 LINE L1 5699 6104 -60 1872 132 14 0 chr10 101528225 101528514 -38788251 + AluSx SINE Alu 1 293 -19 1431 267 88 19 chr10 101528616 101528875 -38787890 - L1ME3A LINE L1 -24 6146 5906 315 0 0 0 chr10 101528875 101528910 -38787855 + (TG)n Simple_repeat Simple_repeat 2 36 0 1431 267 88 19 chr10 101528910 101529171 -38787594 - L1ME3A LINE L1 -264 5906 5590 22 0 0 0 chr10 101529177 101529199 -38787566 + AT_rich Low_complexity Low_complexity 1 22 0 2270 119 0 0 chr10 101529253 101529547 -38787218 - AluSq SINE Alu -19 294 1 262 274 97 4 chr10 101530355 101530532 -38786233 + MIR SINE MIR 8 262 0 724 237 76 40 chr10 101530542 101530791 -38785974 + MIR SINE MIR 5 262 0 1165 132 93 34 chr10 101531357 101531543 -38785222 + AluJo SINE Alu 96 296 -16 2579 71 0 6 chr10 101531543 101531854 -38784911 + AluY SINE Alu 3 311 0 1165 132 93 34 chr10 101531854 101531872 -38784893 + AluJo SINE Alu 296 312 0 3264 141 11 9 chr10 101532086 101532641 -38784124 + L1MB7 LINE L1 5610 6165 -19 2459 84 0 0 chr10 101532758 101533057 -38783708 + AluY SINE Alu 1 299 -12 461 278 171 11 chr10 101533123 101533310 -38783455 - MIR SINE MIR -10 252 36 1226 185 118 44 chr10 101533401 101533671 -38783094 - AluJo SINE Alu -22 290 1 288 293 43 43 chr10 101533675 101533863 -38782902 - L1ME LINE L1 -329 5792 5605 281 323 99 33 chr10 101534140 101534474 -38782291 - L1ME LINE L1 -308 5813 5458 3795 205 19 77 chr10 101534492 101535521 -38781244 - LTR5 LTR ERVK 0 969 1 2142 109 10 3 chr10 101535669 101535962 -38780803 + AluSx SINE Alu 3 297 -15 1577 145 0 4 chr10 101536258 101536499 -38780266 + AluSg/x SINE Alu 68 307 -5 379 275 43 77 chr10 101536727 101536934 -38779831 + MLT1J LTR MaLR 111 310 -201 345 351 82 0 chr10 101538101 101538272 -38778493 - MIR SINE MIR -9 253 69 332 172 0 0 chr10 101538686 101538744 -38778021 + Alu SINE Alu 239 296 -5 436 200 160 0 chr10 101538744 101538844 -38777921 - AluSq/x SINE Alu -196 117 2 2306 82 3 3 chr10 101538860 101539152 -38777613 - AluY SINE Alu -19 292 1 1100 96 0 0 chr10 101539152 101539288 -38777477 - AluSq/x SINE Alu -176 136 1 1086 194 0 0 chr10 101539291 101539477 -38777288 + AluSp SINE Alu 121 306 -7 2191 113 0 0 chr10 101539656 101539967 -38776798 - AluSx SINE Alu 0 311 1 2131 115 28 0 chr10 101540191 101540479 -38776286 + AluSp SINE Alu 1 296 -17 2257 102 10 0 chr10 101540583 101540876 -38775889 + AluSg SINE Alu 1 296 -14 433 264 0 0 chr10 101540996 101541087 -38775678 + MLT1K LTR MaLR 88 178 -410 523 323 39 18 chr10 101541778 101542007 -38774758 + MIR SINE MIR 12 245 -17 547 157 49 0 chr10 101542010 101542112 -38774653 + L1MB8 LINE L1 6015 6121 -57 1340 107 0 0 chr10 101542112 101542290 -38774475 - AluSg/x SINE Alu -16 294 117 2416 94 7 0 chr10 101542295 101542602 -38774163 - AluSg SINE Alu -1 309 1 2418 63 0 41 chr10 101542772 101543091 -38773674 - AluY SINE Alu -5 306 1 1800 102 109 8 chr10 101543611 101543877 -38772888 + AluSq SINE Alu 1 293 -20 416 282 18 74 chr10 101543924 101544014 -38772751 - MLT1J LTR MaLR -250 261 168 2322 80 3 3 chr10 101544014 101544302 -38772463 + AluSp SINE Alu 1 288 -25 186 103 0 0 chr10 101544302 101544331 -38772434 + (TA)n Simple_repeat Simple_repeat 1 29 0 416 282 18 74 chr10 101544331 101544402 -38772363 - MLT1J LTR MaLR -341 170 108 1201 150 64 0 chr10 101544699 101544886 -38771879 + AluJb SINE Alu 94 292 -20 578 129 0 0 chr10 101545001 101545086 -38771679 + AluS SINE Alu 221 305 -7 1773 181 0 10 chr10 101545292 101545584 -38771181 + AluJb SINE Alu 1 289 -23 384 22 0 0 chr10 101545606 101545651 -38771114 + (CA)n Simple_repeat Simple_repeat 1 45 0 717 134 54 0 chr10 101545708 101545820 -38770945 - FLAM_C SINE Alu -15 118 1 778 177 106 10 chr10 101545986 101546184 -38770581 - MLT1C LTR MaLR -244 223 7 2323 102 3 3 chr10 101546313 101546616 -38770149 + AluSp SINE Alu 1 303 -10 2223 98 17 0 chr10 101546839 101547134 -38769631 + AluSq SINE Alu 1 300 -13 1712 194 28 0 chr10 101547918 101548206 -38768559 + AluJb SINE Alu 1 296 -16 2265 112 0 7 chr10 101548209 101548504 -38768261 + AluSx SINE Alu 1 293 -19 949 205 0 6 chr10 101548553 101548714 -38768051 - AluJo SINE Alu -26 286 127 2430 99 0 0 chr10 101548776 101549080 -38767685 - AluSp SINE Alu -9 304 1 783 182 8 0 chr10 101549639 101549771 -38766994 + FAM SINE Alu 1 133 -52 25 0 0 0 chr10 101549854 101549879 -38766886 + AT_rich Low_complexity Low_complexity 1 25 0 2401 72 0 13 chr10 101550206 101550510 -38766255 - AluSq SINE Alu -13 300 1 2182 128 24 0 chr10 101550868 101551165 -38765600 - AluSx SINE Alu -8 304 1 258 314 77 88 chr10 101551654 101551848 -38764917 - MIR SINE MIR -48 214 23 2449 66 0 7 chr10 101552183 101552485 -38764280 - AluY SINE Alu -11 300 1 270 0 0 0 chr10 101552521 101552551 -38764214 + (CA)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 101552550 101552577 -38764188 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 279 291 139 53 chr10 101552612 101552741 -38764024 - L2 LINE L2 -44 3269 3153 2736 20 7 0 chr10 101552741 101553045 -38763720 + AluY SINE Alu 1 306 -5 279 291 139 53 chr10 101553045 101553159 -38763606 - L2 LINE L2 -160 3153 3005 2268 112 7 0 chr10 101553373 101553677 -38763088 + AluSq SINE Alu 1 306 -7 461 313 98 55 chr10 101553708 101554108 -38762657 - L2 LINE L2 -351 2963 2547 1752 175 3 13 chr10 101554110 101554419 -38762346 + AluJb SINE Alu 1 306 -6 2306 90 7 0 chr10 101554419 101554718 -38762047 + AluSc SINE Alu 1 302 -7 2070 115 4 4 chr10 101554721 101555034 -38761731 + AluSc SINE Alu 1 313 0 2571 228 126 33 chr10 101555163 101555371 -38761394 - L2 LINE L2 0 3313 3126 2158 113 21 0 chr10 101555371 101555662 -38761103 - AluSq SINE Alu -16 297 1 2571 228 126 33 chr10 101555662 101555936 -38760829 - L2 LINE L2 -187 3126 2879 2504 97 0 0 chr10 101555936 101556245 -38760520 + AluSx SINE Alu 1 309 -3 2234 109 3 0 chr10 101556255 101556548 -38760217 + AluSg SINE Alu 1 294 -16 2571 228 126 33 chr10 101556548 101557180 -38759585 - L2 LINE L2 -442 2871 2077 2242 96 10 0 chr10 101557192 101557483 -38759282 + AluSq SINE Alu 1 294 -19 2026 130 20 7 chr10 101557584 101557877 -38758888 - AluSx SINE Alu -15 297 1 2379 101 7 0 chr10 101557898 101558205 -38758560 - AluSc SINE Alu 0 309 1 1828 178 40 15 chr10 101558211 101558611 -38758154 - L1ME LINE L1 -388 5778 5369 2208 118 3 0 chr10 101558806 101559103 -38757662 + AluSx SINE Alu 1 298 -14 226 224 75 0 chr10 101559597 101559664 -38757101 - MLT1J2 LTR MaLR -8 442 371 1656 163 0 92 chr10 101559684 101560009 -38756756 + AluJb SINE Alu 1 295 -17 1759 190 7 0 chr10 101560011 101560301 -38756464 + AluJb SINE Alu 1 292 -20 1902 155 0 29 chr10 101560403 101560713 -38756052 - AluJb SINE Alu -11 301 1 248 95 60 0 chr10 101560810 101560862 -38755903 - L1MB5 LINE L1 0 6174 6127 527 215 9 0 chr10 101560904 101561011 -38755754 - FLAM_A SINE Alu -34 108 1 981 149 32 0 chr10 101561031 101561185 -38755580 + AluSg/x SINE Alu 135 293 -17 1268 215 38 24 chr10 101561190 101561426 -38755339 - L1MB5 LINE L1 -42 6132 5901 1522 98 0 0 chr10 101561426 101561619 -38755146 - AluY SINE Alu -12 299 107 2407 93 0 13 chr10 101561620 101561933 -38754832 - AluSc SINE Alu 0 309 1 1268 215 38 24 chr10 101561933 101562033 -38754732 - L1MB5 LINE L1 -272 5902 5789 440 100 12 12 chr10 101562048 101562128 -38754637 + AluSp/q SINE Alu 232 311 -2 560 87 0 0 chr10 101562151 101562220 -38754545 + AluSp SINE Alu 6 74 -239 1850 127 80 77 chr10 101562222 101562662 -38754103 - LTR7 LTR ERV1 -2 448 8 1805 91 4 4 chr10 101562662 101562893 -38753872 + AluSp SINE Alu 64 294 -19 327 240 115 10 chr10 101562974 101563070 -38753695 - MIR SINE MIR -58 204 99 325 317 73 36 chr10 101564304 101564481 -38752284 - MIR SINE MIR -65 197 16 385 308 149 24 chr10 101564989 101565492 -38751273 + L1ME4a LINE L1 5338 5903 -218 2495 53 3 13 chr10 101565585 101565888 -38750877 - AluSq SINE Alu -13 300 1 1504 139 39 65 chr10 101566060 101566370 -38750395 + AluJo SINE Alu 1 302 -10 222 176 0 0 chr10 101567013 101567064 -38749701 + GA-rich Low_complexity Low_complexity 1 51 0 26 74 0 0 chr10 101567173 101567227 -38749538 + GC_rich Low_complexity Low_complexity 1 54 0 1951 157 6 10 chr10 101569668 101569980 -38746785 - AluJb SINE Alu -1 311 1 278 241 181 35 chr10 101570091 101570207 -38746558 + MIR SINE MIR 60 192 -70 211 200 100 0 chr10 101570281 101570321 -38746444 - MIR SINE MIR -93 169 126 2252 104 10 0 chr10 101570432 101570720 -38746045 - AluSc SINE Alu -17 292 2 2204 116 3 0 chr10 101570721 101571015 -38745750 - AluSx SINE Alu -17 295 1 203 291 18 0 chr10 101571672 101571727 -38745038 - MIR SINE MIR 0 262 207 2097 124 10 22 chr10 101571727 101572041 -38744724 - AluSx SINE Alu -2 310 1 181 204 61 20 chr10 101572043 101572092 -38744673 - MIR SINE MIR -30 232 182 2103 101 58 0 chr10 101573017 101573295 -38743470 - AluSx SINE Alu -17 295 2 647 191 91 78 chr10 101573555 101573785 -38742980 - MIR SINE MIR -29 233 1 2420 112 0 0 chr10 101574133 101574445 -38742320 - AluSx SINE Alu 0 312 1 1834 101 52 0 chr10 101574708 101574956 -38741809 - AluSx SINE Alu -51 261 1 244 310 129 0 chr10 101575211 101575327 -38741438 - MIR SINE MIR -70 192 62 327 300 31 77 chr10 101576168 101576298 -38740467 + MIR SINE MIR 20 143 -65 2115 127 3 7 chr10 101576310 101576617 -38740148 - AluSq SINE Alu -7 306 1 1574 178 41 0 chr10 101576651 101576920 -38739845 + AluJb SINE Alu 1 280 -32 189 0 0 0 chr10 101576920 101576941 -38739824 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2480 71 0 40 chr10 101577019 101577343 -38739422 + AluY SINE Alu 1 311 0 2199 126 3 0 chr10 101577354 101577664 -38739101 + AluSx SINE Alu 1 311 -1 884 242 177 23 chr10 101578413 101578533 -38738232 - AluSg SINE Alu 0 300 200 2369 103 0 3 chr10 101578533 101578844 -38737921 - AluSg SINE Alu 0 310 1 884 242 177 23 chr10 101578844 101578983 -38737782 - AluSg SINE Alu -100 200 1 371 244 32 4 chr10 101578988 101579106 -38737659 - MIR SINE MIR -49 159 37 204 125 0 0 chr10 101579363 101579395 -38737370 + (A)n Simple_repeat Simple_repeat 1 32 0 34 79 0 0 chr10 101581866 101581942 -38734823 + GC_rich Low_complexity Low_complexity 1 76 0 249 167 0 0 chr10 101582050 101582104 -38734661 + CT-rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 101582172 101582211 -38734554 + GC_rich Low_complexity Low_complexity 1 39 0 218 204 0 0 chr10 101582571 101582620 -38734145 + (CA)n Simple_repeat Simple_repeat 1 49 0 2456 53 0 0 chr10 101582916 101583225 -38733540 - AluSx SINE Alu 0 309 1 2308 111 0 0 chr10 101583238 101583544 -38733221 - AluSp SINE Alu -7 306 1 1777 168 40 0 chr10 101583701 101583998 -38732767 - AluJb SINE Alu -3 309 1 577 193 377 9 chr10 101584316 101584404 -38732361 - L1M4 LINE L1 -1888 4258 4203 2104 144 0 10 chr10 101584404 101584717 -38732048 - AluJb SINE Alu -2 310 1 577 193 377 9 chr10 101584717 101584851 -38731914 - L1M4 LINE L1 -1943 4203 3954 276 30 0 0 chr10 101584854 101584887 -38731878 + (TTG)n Simple_repeat Simple_repeat 3 35 0 2170 110 0 4 chr10 101584887 101585168 -38731597 - AluSx SINE Alu -32 280 1 740 222 34 11 chr10 101585248 101585424 -38731341 + L1ME2 LINE L1 5527 5706 -458 453 130 0 0 chr10 101585426 101585503 -38731262 - AluJ/FRAM SINE Alu -11 301 225 1375 208 19 80 chr10 101585504 101585940 -38730825 + L1ME2 LINE L1 5699 6106 -78 2230 132 0 0 chr10 101585940 101586279 -38730486 + AluSx SINE Alu 1 312 0 1375 208 19 80 chr10 101586279 101586329 -38730436 + L1ME2 LINE L1 6106 6158 -26 3097 141 11 9 chr10 101586483 101587038 -38729727 + L1MB7 LINE L1 5610 6165 -19 2284 107 6 19 chr10 101587155 101587472 -38729293 + AluSq SINE Alu 1 313 0 454 129 281 65 chr10 101588096 101588132 -38728633 + MSTC LTR MaLR 1 28 -400 1968 134 3 39 chr10 101588132 101588438 -38728327 + AluSx SINE Alu 1 295 -17 454 129 281 65 chr10 101588438 101588540 -38728225 + MSTC LTR MaLR 28 169 -259 2082 120 3 41 chr10 101588679 101588862 -38727903 - AluSq SINE Alu -4 309 141 2413 104 7 0 chr10 101588862 101589169 -38727596 - AluSq SINE Alu -4 309 1 2082 120 3 41 chr10 101589169 101589301 -38727464 - AluSq SINE Alu -172 141 6 2758 160 24 60 chr10 101589307 101589736 -38727029 + L1MA9 LINE L1 5419 5819 -493 2056 142 10 0 chr10 101589736 101590038 -38726727 - AluSx SINE Alu -7 305 1 2758 160 24 60 chr10 101590038 101590238 -38726527 + L1MA9 LINE L1 5819 6025 -287 337 313 157 6 chr10 101590243 101590409 -38726356 + L1M4 LINE L1 4457 4647 -1499 255 31 0 0 chr10 101590419 101590451 -38726314 + (TA)n Simple_repeat Simple_repeat 2 33 0 2092 108 11 3 chr10 101590798 101591084 -38725681 - AluSq SINE Alu -25 288 1 1986 233 81 11 chr10 101591096 101591727 -38725038 + L2 LINE L2 2077 2751 -563 2244 109 3 0 chr10 101591727 101592020 -38724745 - AluSg SINE Alu -16 294 1 2481 104 0 0 chr10 101592030 101592339 -38724426 - AluSx SINE Alu -3 309 1 187 300 17 17 chr10 101592343 101592403 -38724362 - MIR SINE MIR -50 212 153 306 243 231 46 chr10 101592416 101592589 -38724176 + MIR SINE MIR 53 257 -5 221 305 54 0 chr10 101592706 101592919 -38723846 + G-rich Low_complexity Low_complexity 1 224 0 192 238 79 16 chr10 101593030 101593093 -38723672 + L2 LINE L2 2702 2768 -546 273 283 197 0 chr10 101593124 101593276 -38723489 - L2 LINE L2 -261 3052 2871 1002 238 36 13 chr10 101593403 101593705 -38723060 + L1MEc LINE L1 37 345 -6051 1736 182 12 80 chr10 101593841 101593991 -38722774 + MSTC LTR MaLR 43 202 -226 1739 154 17 30 chr10 101593991 101594289 -38722476 - AluJo SINE Alu -18 294 1 1736 182 12 80 chr10 101594289 101594320 -38722445 + MSTC LTR MaLR 202 234 -194 2336 109 0 0 chr10 101594320 101594614 -38722151 + AluSq SINE Alu 1 294 -19 2528 55 3 0 chr10 101594614 101594906 -38721859 + AluY SINE Alu 1 293 -18 1736 182 12 80 chr10 101594906 101595135 -38721630 + MSTC LTR MaLR 232 427 -1 1788 113 21 108 chr10 101595486 101595625 -38721140 + AluYb8 SINE Alu 1 150 -168 1482 128 0 9 chr10 101595625 101595836 -38720929 - AluSc SINE Alu -2 307 99 2075 114 43 10 chr10 101595836 101596135 -38720630 + AluSc SINE Alu 1 309 0 1788 113 21 108 chr10 101596135 101596329 -38720436 + AluYb8 SINE Alu 148 306 -12 924 236 9 13 chr10 101596332 101596565 -38720200 + L1MB5 LINE L1 5901 6132 -42 985 149 32 0 chr10 101596570 101596724 -38720041 - AluSg/x SINE Alu -17 293 135 487 215 9 0 chr10 101596744 101596851 -38719914 + FLAM_A SINE Alu 1 108 -34 241 95 60 0 chr10 101596893 101596945 -38719820 + L1MB5 LINE L1 6127 6174 0 1912 155 0 29 chr10 101597042 101597352 -38719413 + AluJb SINE Alu 1 301 -11 363 191 52 26 chr10 101597517 101597632 -38719133 + AluSp/q SINE Alu 186 303 0 1279 209 55 114 chr10 101597674 101597748 -38719017 + L1ME3A LINE L1 5317 5394 -776 1887 178 3 0 chr10 101597748 101598051 -38718714 + AluJo SINE Alu 1 304 -8 1279 209 55 114 chr10 101598051 101598409 -38718356 + L1ME3A LINE L1 5394 5701 -469 1704 209 0 0 chr10 101598409 101598696 -38718069 + AluJo SINE Alu 1 287 -25 1279 209 55 114 chr10 101598696 101598902 -38717863 + L1ME3A LINE L1 5701 5918 -252 952 188 7 0 chr10 101598902 101599086 -38717679 - AluJb SINE Alu 0 318 134 1662 183 17 23 chr10 101599086 101599277 -38717488 - AluJo SINE Alu -14 298 108 2479 88 0 0 chr10 101599277 101599582 -38717183 + AluY SINE Alu 1 305 -6 1662 183 17 23 chr10 101599582 101599690 -38717075 - AluJo SINE Alu -204 108 1 2086 137 3 0 chr10 101599734 101600033 -38716732 + AluJb SINE Alu 1 300 -12 439 212 20 0 chr10 101600500 101600599 -38716166 - AluSg/x SINE Alu -17 292 192 701 222 59 10 chr10 101600744 101600947 -38715818 + 7SLRNA srpRNA srpRNA 13 225 -95 1116 111 159 11 chr10 101600967 101601156 -38715609 + AluSg/x SINE Alu 80 296 -16 579 163 0 0 chr10 101601161 101601259 -38715506 + 7SLRNA srpRNA srpRNA 223 320 0 196 312 78 0 chr10 101601877 101601954 -38714811 + L2 LINE L2 3137 3219 -53 2115 119 0 17 chr10 101602160 101602453 -38714312 - AluSx SINE Alu -14 298 11 2669 43 3 0 chr10 101602605 101602907 -38713858 + AluY SINE Alu 1 303 -8 2246 87 29 29 chr10 101602911 101603221 -38713544 + AluSg SINE Alu 1 310 0 858 152 0 0 chr10 101603393 101603525 -38713240 - FLAM_C SINE Alu -1 132 1 2480 78 3 3 chr10 101603650 101603958 -38712807 - AluSg SINE Alu -2 308 1 495 210 63 21 chr10 101604045 101604188 -38712577 - L2 LINE L2 -5 3308 3160 2169 125 3 3 chr10 101604194 101604490 -38712275 + AluSp SINE Alu 3 298 -15 242 312 22 22 chr10 101604544 101604682 -38712083 - L1MC/D LINE L1 -1934 5874 5737 21 0 0 0 chr10 101605198 101605219 -38711546 + AT_rich Low_complexity Low_complexity 1 21 0 1479 201 47 7 chr10 101605249 101605528 -38711237 - AluJo SINE Alu -11 301 12 2394 100 0 0 chr10 101605543 101605852 -38710913 - AluY SINE Alu -2 309 1 345 100 0 0 chr10 101606573 101606623 -38710142 + (TG)n Simple_repeat Simple_repeat 2 51 0 201 354 83 0 chr10 101606846 101606942 -38709823 + L2 LINE L2 3164 3267 -5 2219 120 7 0 chr10 101607244 101607543 -38709222 - AluSx SINE Alu -11 301 1 2387 92 7 0 chr10 101608365 101608670 -38708095 - AluSq SINE Alu 0 313 7 1162 81 0 13 chr10 101608673 101608822 -38707943 - AluSp SINE Alu -166 147 1 1792 104 6 119 chr10 101609635 101609972 -38706793 + AluSx SINE Alu 1 299 -3 40 31 0 15 chr10 101609981 101609999 -38706766 + AT_rich Low_complexity Low_complexity 1 18 -46 2442 73 0 10 chr10 101609999 101610302 -38706463 + AluY SINE Alu 1 300 -11 40 31 0 15 chr10 101610302 101610348 -38706417 + AT_rich Low_complexity Low_complexity 18 64 0 200 204 68 0 chr10 101610677 101610721 -38706044 - L2 LINE L2 -6 3307 3261 1025 162 0 0 chr10 101610741 101610895 -38705870 - AluJ SINE Alu -23 289 136 386 69 17 0 chr10 101610927 101610985 -38705780 + (TTCA)n Simple_repeat Simple_repeat 1 59 0 287 308 161 56 chr10 101610987 101611377 -38705388 - L2 LINE L2 -15 3257 2827 5228 72 109 20 chr10 101611393 101612176 -38704589 + SVA Other Other 4 855 -531 6257 50 39 36 chr10 101612304 101613210 -38703555 + SVA Other Other 507 1414 0 636 138 81 24 chr10 101613327 101613450 -38703315 - AluJ SINE Alu -179 133 4 2223 108 10 3 chr10 101613461 101613766 -38702999 - AluSq SINE Alu -6 307 1 1940 96 0 16 chr10 101613777 101614028 -38702737 - AluSx SINE Alu -6 306 60 270 351 9 0 chr10 101614053 101614164 -38702601 - L2 LINE L2 -620 2694 2583 770 250 11 0 chr10 101614285 101614465 -38702300 - L1ME LINE L1 -426 5695 5514 284 264 73 51 chr10 101614613 101614791 -38701974 + L2 LINE L2 2648 2829 -485 323 306 161 12 chr10 101614829 101615071 -38701694 - L2 LINE L2 -62 3251 2974 194 283 19 0 chr10 101615205 101615258 -38701507 + L2 LINE L2 3008 3061 -211 326 239 128 65 chr10 101615632 101616020 -38700745 + MLT1J LTR MaLR 8 461 -50 1763 155 0 22 chr10 101616255 101616533 -38700232 + AluJo SINE Alu 1 272 -40 208 291 173 27 chr10 101617184 101617294 -38699471 + MIR SINE MIR 28 153 -109 180 281 111 52 chr10 101618054 101618189 -38698576 + MIR3 SINE MIR 3 145 -63 248 303 61 20 chr10 101618430 101618529 -38698236 + L3 LINE CR1 1457 1559 -18 185 321 48 36 chr10 101619244 101619409 -38697356 - L3 LINE CR1 -150 1427 1261 287 239 42 14 chr10 101619934 101620005 -38696760 + MER91A DNA MER1_type 124 196 0 368 353 115 14 chr10 101620031 101620309 -38696456 + L2 LINE L2 2985 3290 -23 485 280 99 11 chr10 101620505 101620687 -38696078 - MIR SINE MIR -60 202 5 703 296 31 9 chr10 101621621 101621844 -38694921 + MIR SINE MIR 12 239 -23 216 0 0 0 chr10 101623400 101623424 -38693341 + (T)n Simple_repeat Simple_repeat 1 24 0 357 209 58 0 chr10 101624843 101624929 -38691836 + MER53 DNA DNA 1 91 -98 266 325 42 33 chr10 101625190 101625310 -38691455 - MER5A DNA MER1_type -3 186 66 2176 139 3 0 chr10 101625313 101625623 -38691142 - AluSp SINE Alu -2 311 1 250 316 82 0 chr10 101625667 101625765 -38691000 - MIR3 SINE MIR -22 186 81 416 68 17 0 chr10 101626378 101626437 -38690328 - AluS SINE Alu -248 64 5 2650 156 19 33 chr10 101626442 101626520 -38690245 + L1MD1 LINE L1 5701 5779 -463 1840 150 17 7 chr10 101626520 101626820 -38689945 + AluJo SINE Alu 1 303 -9 2650 156 19 33 chr10 101626820 101627281 -38689484 + L1MD1 LINE L1 5779 6232 -10 2166 94 11 0 chr10 101627281 101627590 -38689175 + AluSg SINE Alu 1 312 0 913 138 0 21 chr10 101627613 101627758 -38689007 + FLAM_C SINE Alu 1 142 -1 639 197 0 0 chr10 101627758 101627875 -38688890 + AluJb SINE Alu 194 310 -2 1987 114 0 7 chr10 101627875 101628147 -38688618 + AluSx SINE Alu 39 308 -4 1922 147 16 35 chr10 101628149 101628463 -38688302 + AluSx SINE Alu 1 308 -4 258 206 0 0 chr10 101628473 101628536 -38688229 + GA-rich Low_complexity Low_complexity 2 64 0 263 310 0 0 chr10 101628888 101628959 -38687806 + MER5A DNA MER1_type 119 189 0 373 268 89 8 chr10 101630056 101630179 -38686586 - MIR SINE MIR -110 152 20 669 293 0 16 chr10 101631623 101631811 -38684954 - MIR SINE MIR -11 251 67 676 164 0 0 chr10 101632519 101632623 -38684142 - FRAM SINE Alu -17 159 56 445 320 30 0 chr10 101632644 101632844 -38683921 - L1ME3A LINE L1 -233 5937 5732 740 163 24 8 chr10 101632852 101632975 -38683790 + FLAM_C SINE Alu 2 126 -17 359 268 124 26 chr10 101633013 101633168 -38683597 - L1ME3A LINE L1 -379 5742 5604 1612 168 44 10 chr10 101633168 101633465 -38683300 - AluJb SINE Alu -5 307 1 359 268 124 26 chr10 101633465 101633610 -38683155 - L1ME3A LINE L1 -517 5604 5412 716 182 0 0 chr10 101633815 101633936 -38682829 + FLAM_C SINE Alu 21 141 -2 706 84 0 21 chr10 101633936 101634031 -38682734 + AluJo/FRAM SINE Alu 206 298 -14 230 286 143 33 chr10 101634987 101635151 -38681614 + MIR3 SINE MIR 10 187 -64 356 252 84 53 chr10 101635383 101635424 -38681341 + MIR SINE MIR 128 166 -96 2042 103 4 4 chr10 101635424 101635726 -38681039 - AluSx SINE Alu 0 302 1 356 252 84 53 chr10 101635726 101635814 -38680951 + MIR SINE MIR 166 262 0 2032 121 0 19 chr10 101636348 101636486 -38680279 + AluSx SINE Alu 1 140 -172 2142 129 0 0 chr10 101636486 101636796 -38679969 + AluSg SINE Alu 1 310 0 2032 121 0 19 chr10 101636796 101636970 -38679795 + AluSx SINE Alu 140 307 -5 2224 101 0 0 chr10 101636970 101637266 -38679499 + AluSq SINE Alu 1 296 -17 211 233 55 14 chr10 101637279 101637352 -38679413 + L2 LINE L2 2896 2971 -301 2231 115 0 3 chr10 101637633 101637945 -38678820 - AluSx SINE Alu -1 311 1 1997 139 3 7 chr10 101638082 101638392 -38678373 - AluSx SINE Alu -3 309 1 712 211 24 77 chr10 101638534 101638599 -38678166 - L1MD3 LINE L1 -10 7985 7918 2347 74 0 0 chr10 101638599 101638898 -38677867 + AluY SINE Alu 1 299 -12 712 211 24 77 chr10 101638898 101639040 -38677725 - L1MD3 LINE L1 -77 7918 7789 240 179 0 0 chr10 101639040 101639079 -38677686 + Alu SINE Alu 210 248 -54 1355 142 9 13 chr10 101639081 101639279 -38677486 + AluSg/x SINE Alu 85 283 -29 396 0 0 0 chr10 101639279 101639323 -38677442 + (CA)n Simple_repeat Simple_repeat 1 44 0 1355 142 9 13 chr10 101639323 101639349 -38677416 + AluSg/x SINE Alu 283 308 -4 907 174 0 67 chr10 101639352 101639530 -38677235 + FRAM SINE Alu 1 166 0 893 109 0 48 chr10 101639559 101639695 -38677070 + L1PA10 LINE L1 6019 6149 -19 321 26 0 0 chr10 101639695 101639733 -38677032 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 2243 78 3 37 chr10 101642633 101642955 -38673810 + AluY SINE Alu 1 311 0 1802 170 0 7 chr10 101643029 101643335 -38673430 + AluSx SINE Alu 1 304 -8 2188 87 3 0 chr10 101643335 101643624 -38673141 + AluSg SINE Alu 1 290 -20 910 129 0 0 chr10 101643704 101643836 -38672929 - FLAM_C SINE Alu -1 132 1 300 267 83 25 chr10 101644115 101644235 -38672530 - MIR SINE MIR -116 146 20 2212 83 0 0 chr10 101644987 101645265 -38671500 - AluSg SINE Alu -13 297 20 364 319 45 13 chr10 101645426 101645583 -38671182 + MIR SINE MIR 22 183 -79 205 243 185 16 chr10 101645916 101646089 -38670676 - MIR SINE MIR -50 212 15 1007 186 16 21 chr10 101647661 101647854 -38668911 + MER20 DNA MER1_type 27 218 -1 186 125 0 0 chr10 101648110 101648142 -38668623 + MIR3 SINE MIR 170 201 -7 201 244 0 0 chr10 101649011 101649052 -38667713 + L2 LINE L2 3019 3059 -213 218 287 238 0 chr10 101649183 101649284 -38667481 - MIR SINE MIR -56 206 82 266 274 9 0 chr10 101649291 101649404 -38667361 + (TGGA)n Simple_repeat Simple_repeat 4 117 0 191 298 123 18 chr10 101649971 101650085 -38666680 - MIR3 SINE MIR -30 178 53 258 313 80 51 chr10 101650461 101650637 -38666128 + L2 LINE L2 2866 3046 -226 191 36 36 0 chr10 101650950 101650978 -38665787 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 626 139 58 36 chr10 101651209 101651244 -38665521 + L1MB4 LINE L1 6041 6074 -106 2247 97 0 28 chr10 101651244 101651565 -38665200 + AluSx SINE Alu 1 312 0 626 139 58 36 chr10 101651565 101651666 -38665099 + L1MB4 LINE L1 6074 6180 0 1043 159 0 0 chr10 101651670 101651833 -38664932 + AluSg/x SINE Alu 137 299 -13 464 277 85 17 chr10 101651980 101651991 -38664774 - MIR SINE MIR -55 207 198 802 130 26 0 chr10 101651991 101652106 -38664659 - FLAM_C SINE Alu -15 118 1 464 277 85 17 chr10 101652106 101652271 -38664494 - MIR SINE MIR -64 198 19 330 214 22 11 chr10 101653074 101653163 -38663602 - MER5A DNA MER1_type -83 106 17 637 240 0 0 chr10 101653711 101653836 -38662929 + FLAM_A SINE Alu 1 125 -8 1614 164 3 43 chr10 101653838 101654142 -38662623 + AluJo SINE Alu 1 292 -20 1958 133 0 3 chr10 101654144 101654473 -38662292 + AluSx SINE Alu 1 328 0 2050 114 7 10 chr10 101655215 101655514 -38661251 - AluSx SINE Alu -14 298 1 284 230 186 44 chr10 101655515 101655628 -38661137 - AluJb SINE Alu -166 136 8 337 294 0 0 chr10 101655641 101655726 -38661039 + L2 LINE L2 3186 3270 -2 235 159 0 23 chr10 101656007 101656051 -38660714 + L2 LINE L2 3227 3269 -3 324 217 14 0 chr10 101656082 101656151 -38660614 + MIR SINE MIR 160 229 -33 216 176 15 103 chr10 101656127 101656195 -38660570 + L2 LINE L2 3210 3271 -1 * 2041 110 10 20 chr10 101656845 101657144 -38659621 - AluSx SINE Alu -16 296 1 2136 103 7 0 chr10 101657415 101657706 -38659059 + AluSx SINE Alu 1 293 -19 1435 199 15 83 chr10 101661050 101661209 -38655556 + MLT1A2 LTR MaLR 5 173 -201 881 136 8 0 chr10 101661209 101661341 -38655424 - FLAM_A SINE Alu 0 133 1 1435 199 15 83 chr10 101661341 101661578 -38655187 + MLT1A2 LTR MaLR 173 374 0 213 301 23 29 chr10 101661611 101661722 -38655043 + MIR SINE MIR 3 113 -95 245 257 29 14 chr10 101661727 101661797 -38654968 - L2 LINE L2 -50 3222 3152 215 295 190 40 chr10 101661837 101662018 -38654747 - MIR SINE MIR -14 248 33 2254 85 3 0 chr10 101662018 101662313 -38654452 + AluSp SINE Alu 1 296 -17 215 295 190 40 chr10 101662313 101662331 -38654434 - MIR SINE MIR -229 33 19 219 349 48 0 chr10 101662362 101662445 -38654320 + MIR SINE MIR 162 248 -14 1768 132 0 15 chr10 101662455 101662727 -38654038 + AluSx SINE Alu 37 304 -8 1839 79 12 12 chr10 101663453 101663707 -38653058 - AluSq SINE Alu -2 311 58 22 0 0 0 chr10 101663851 101663873 -38652892 + AT_rich Low_complexity Low_complexity 1 22 0 2283 50 7 0 chr10 101663952 101664231 -38652534 + LTR5 LTR ERVK 5 285 -684 2404 60 0 0 chr10 101664231 101664530 -38652235 + AluY SINE Alu 1 299 -12 5287 73 23 1 chr10 101664534 101665220 -38651545 + LTR5 LTR ERVK 269 969 0 292 250 80 0 chr10 101665220 101665308 -38651457 - LTR16B LTR ERVL -7 457 363 951 145 0 0 chr10 101665581 101665712 -38651053 + FLAM_C SINE Alu 3 133 0 2284 75 3 7 chr10 101665727 101666034 -38650731 + AluY SINE Alu 1 306 -5 1976 101 14 0 chr10 101666384 101666661 -38650104 - AluSg SINE Alu -29 281 1 205 153 0 265 chr10 101666810 101666908 -38649857 - MIR3 SINE MIR -17 191 120 921 54 0 0 chr10 101666933 101667045 -38649720 + HY1 scRNA scRNA 1 112 0 530 185 11 0 chr10 101667162 101667254 -38649511 + AluJ/FLAM SINE Alu 2 94 -218 2284 75 14 0 chr10 101667973 101668266 -38648499 - AluY SINE Alu -14 297 1 409 280 108 84 chr10 101668849 101669303 -38647462 + MLT1K LTR MaLR 117 581 -7 181 225 0 0 chr10 101669345 101669385 -38647380 + L2 LINE L2 3273 3312 -1 204 125 0 0 chr10 101670731 101670763 -38646002 + (A)n Simple_repeat Simple_repeat 1 32 0 1722 163 4 0 chr10 101670767 101671043 -38645722 + AluJo SINE Alu 20 296 -16 191 315 120 0 chr10 101672640 101672732 -38644033 + L2 LINE L2 3154 3256 -16 395 272 96 59 chr10 101672738 101672977 -38643788 + MIR SINE MIR 2 249 -13 259 348 43 0 chr10 101673475 101673567 -38643198 + MIR SINE MIR 154 249 -13 836 282 14 7 chr10 101674167 101674386 -38642379 - MIR SINE MIR 0 262 45 2034 140 3 7 chr10 101674495 101674803 -38641962 + AluSx SINE Alu 1 307 -5 2062 106 0 40 chr10 101674812 101675115 -38641650 + AluSg SINE Alu 4 294 -16 278 262 61 18 chr10 101675321 101675456 -38641309 - MIR SINE MIR -19 243 103 380 289 6 57 chr10 101675483 101675642 -38641123 + MIR SINE MIR 66 216 -46 309 91 0 0 chr10 101675956 101676000 -38640765 - L2 LINE L2 -7 3306 3263 272 335 96 43 chr10 101676190 101676420 -38640345 + MIR SINE MIR 6 247 -15 783 274 25 0 chr10 101676489 101676693 -38640072 + MIR SINE MIR 10 218 -44 2374 74 3 10 chr10 101676955 101677265 -38639500 - AluSg SINE Alu 0 310 3 866 148 0 15 chr10 101677270 101677405 -38639360 - FLAM_C SINE Alu 0 133 1 3984 138 16 67 chr10 101677480 101678282 -38638483 + L1MB3 LINE L1 5423 6183 0 390 289 6 60 chr10 101678963 101679129 -38637636 - MIR SINE MIR -50 212 56 296 261 111 28 chr10 101679216 101679361 -38637404 - MIR SINE MIR -64 144 42 224 203 62 16 chr10 101679516 101679580 -38637185 + MIR3 SINE MIR 136 202 -6 209 279 239 55 chr10 101680051 101680323 -38636442 - L2 LINE L2 -20 3293 2972 1723 259 106 15 chr10 101680324 101680937 -38635828 - L2 LINE L2 -447 2867 2199 323 250 235 15 chr10 101680945 101681077 -38635688 + L2 LINE L2 3152 3312 -1 1691 179 3 0 chr10 101681544 101681840 -38634925 + AluJo SINE Alu 1 297 -15 393 271 20 10 chr10 101681840 101681934 -38634831 + L1MC4 LINE L1 6613 6702 -1340 200 242 30 15 chr10 101682043 101682109 -38634656 + L3 LINE CR1 1302 1368 -209 449 276 75 8 chr10 101682159 101682293 -38634472 - MIR3 SINE MIR -45 163 21 195 329 63 13 chr10 101682626 101682705 -38634060 - L2 LINE L2 -10 3262 3180 2065 92 7 27 chr10 101683132 101683455 -38633310 - AluSx SINE Alu 0 317 1 395 325 175 15 chr10 101683783 101684183 -38632582 - L2 LINE L2 -916 2398 1935 367 268 31 0 chr10 101684529 101684626 -38632139 + MIR SINE MIR 28 127 -81 382 266 58 13 chr10 101686706 101686860 -38629905 - MIR SINE MIR -101 161 1 349 217 25 33 chr10 101687956 101688076 -38628689 - L1ME2 LINE L1 -10 6154 6036 1707 138 24 10 chr10 101688222 101688518 -38628247 - AluJb SINE Alu -3 309 10 2054 117 3 0 chr10 101688683 101688982 -38627783 + AluSx SINE Alu 5 304 -8 221 323 132 37 chr10 101689896 101690085 -38626680 - L2 LINE L2 -780 2534 2328 1982 128 7 3 chr10 101690716 101691022 -38625743 - AluSp SINE Alu -1 312 6 1040 156 114 17 chr10 101691185 101691422 -38625343 - AluJo SINE Alu -9 303 44 1023 214 0 200 chr10 101691449 101691814 -38624951 + AluJb SINE Alu 1 292 -20 545 273 104 0 chr10 101692249 101692403 -38624362 - MIR SINE MIR -56 206 37 471 281 70 60 chr10 101692425 101692727 -38624038 + L1MEd LINE L1 511 815 -5304 1666 176 0 25 chr10 101692879 101693197 -38623568 + AluJb SINE Alu 1 310 -2 853 188 25 0 chr10 101693227 101693387 -38623378 - FRAM SINE Alu -14 162 1 444 284 139 9 chr10 101693466 101693681 -38623084 + L1M4 LINE L1 4550 4792 -1354 3193 149 36 44 chr10 101693681 101694029 -38622736 - MER4D LTR ERV1 0 903 561 2174 102 0 3 chr10 101694029 101694323 -38622442 + AluSq SINE Alu 1 293 -20 3193 149 36 44 chr10 101694323 101694590 -38622175 - MER4D LTR ERV1 -342 561 293 5541 145 23 3 chr10 101694590 101695496 -38621269 + HERVH LTR ERV1 5093 6016 -1697 3691 110 14 9 chr10 101695489 101696043 -38620722 + HERVH LTR ERV1 7157 7713 0 * 905 114 0 21 chr10 101696043 101696183 -38620582 + LTR7 LTR ERV1 1 137 -313 875 180 59 45 chr10 101696372 101696594 -38620171 + LTR7 LTR ERV1 226 450 0 1237 115 6 0 chr10 101696594 101696768 -38619997 - AluSx SINE Alu -135 177 3 1282 105 21 32 chr10 101696769 101696959 -38619806 - MER4D LTR ERV1 -715 188 1 4137 39 17 0 chr10 101697084 101697566 -38619199 + LTR2B LTR ERV1 1 490 0 6688 80 26 7 chr10 101697566 101698442 -38618323 + Harlequin LTR ERV1 1 893 -6003 5004 77 74 54 chr10 101698435 101699418 -38617347 + Harlequin LTR ERV1 1572 2574 -4322 * 25171 108 10 6 chr10 101699417 101702949 -38613816 + Harlequin LTR ERV1 3352 6896 0 4087 35 23 0 chr10 101702949 101703428 -38613337 + LTR2B LTR ERV1 1 490 0 1754 143 0 11 chr10 101704044 101704345 -38612420 + AluJo SINE Alu 7 304 0 1897 143 3 6 chr10 101704345 101704659 -38612106 + AluSq SINE Alu 1 313 0 254 295 48 19 chr10 101704810 101704915 -38611850 - MARNA DNA Mariner -83 503 396 2205 107 3 0 chr10 101705461 101705769 -38610996 + AluSq SINE Alu 1 309 -4 500 255 53 32 chr10 101705863 101706051 -38610714 + L1ME4a LINE L1 5598 5789 -332 1937 133 0 23 chr10 101706189 101706498 -38610267 + AluSx SINE Alu 1 302 -10 1197 162 41 45 chr10 101706514 101706780 -38609985 - AluJo SINE Alu -15 297 33 385 216 111 49 chr10 101706784 101706816 -38609949 + L1ME4a LINE L1 5947 5976 -145 870 203 0 18 chr10 101706816 101706979 -38609786 + FRAM SINE Alu 1 160 -6 385 216 111 49 chr10 101706979 101707108 -38609657 + L1ME4a LINE L1 5976 6118 -3 946 76 23 15 chr10 101707505 101707637 -38609128 - FLAM_C SINE Alu 0 133 1 287 316 44 9 chr10 101707691 101707805 -38608960 + MER5A DNA MER1_type 5 122 -67 229 191 0 0 chr10 101708114 101708156 -38608609 + (TG)n Simple_repeat Simple_repeat 2 43 0 192 243 36 117 chr10 101708646 101708757 -38608008 + L2 LINE L2 3165 3266 -6 2269 72 17 0 chr10 101709336 101709627 -38607138 + AluSq SINE Alu 3 298 -15 537 143 0 0 chr10 101710173 101710257 -38606508 + FLAM SINE Alu 47 130 -13 1367 212 0 29 chr10 101710275 101710581 -38606184 + AluJo SINE Alu 1 297 -15 1999 118 14 0 chr10 101710964 101711252 -38605513 + AluSx SINE Alu 1 292 -20 280 234 99 113 chr10 101712498 101712639 -38604126 + MER5B DNA MER1_type 1 139 -39 1866 125 3 33 chr10 101712639 101712942 -38603823 + AluSx SINE Alu 1 294 -18 1937 121 35 0 chr10 101712943 101713233 -38603532 + AluSq SINE Alu 1 300 -13 1907 134 0 20 chr10 101713239 101713545 -38603220 + AluJb SINE Alu 1 300 -12 456 278 171 11 chr10 101713611 101713798 -38602967 - MIR SINE MIR -10 252 36 1230 181 118 44 chr10 101713889 101714159 -38602606 - AluJo SINE Alu -12 290 1 307 293 43 43 chr10 101714163 101714351 -38602414 - L1ME LINE L1 -329 5792 5605 1842 128 11 7 chr10 101714577 101714883 -38601882 + AluSx SINE Alu 1 307 0 2221 110 0 0 chr10 101714958 101715268 -38601497 - AluSg SINE Alu 0 310 1 1221 162 23 9 chr10 101715339 101715555 -38601210 - MER20 DNA MER1_type 0 219 1 261 186 136 17 chr10 101715563 101715622 -38601143 - MER58 DNA MER1_type 0 2420 2355 1182 111 6 6 chr10 101715624 101715804 -38600961 - AluSg/x SINE Alu -1 309 130 2345 70 7 0 chr10 101715817 101716119 -38600646 - AluY SINE Alu -7 304 1 2255 109 0 0 chr10 101716158 101716470 -38600295 - AluSx SINE Alu 0 312 1 1461 108 5 0 chr10 101716477 101716681 -38600084 - AluSq SINE Alu -26 287 83 258 259 0 0 chr10 101716722 101716776 -38599989 + L2 LINE L2 3252 3305 -8 1031 225 117 82 chr10 101716830 101717319 -38599446 + MLT1J LTR MaLR 6 511 0 1867 120 62 0 chr10 101717538 101717829 -38598936 - AluJb SINE Alu -2 310 2 511 247 202 0 chr10 101717887 101718065 -38598700 - MIR SINE MIR -32 230 17 2241 91 7 3 chr10 101718350 101718658 -38598107 + AluSp SINE Alu 1 309 -4 318 237 25 0 chr10 101718700 101718790 -38597975 + MIR SINE MIR 54 146 -62 896 252 31 14 chr10 101718864 101719086 -38597679 - MIR SINE MIR 0 262 37 689 113 10 0 chr10 101719262 101719359 -38597406 - AluSg/x SINE Alu -10 300 203 2507 163 27 10 chr10 101719363 101719842 -38596923 - L1MB7 LINE L1 -11 6173 5687 1866 142 10 3 chr10 101719875 101720177 -38596588 - AluJo SINE Alu -8 304 1 983 123 49 6 chr10 101721321 101721483 -38595282 + AluSg/x SINE Alu 124 292 -20 3509 104 54 8 chr10 101721705 101722225 -38594540 - LTR9B LTR ERV1 -84 560 17 1270 147 15 0 chr10 101722565 101722763 -38594002 - HUERS-P3 LTR ERV1 -1 8918 8718 1379 113 0 20 chr10 101722805 101723009 -38593756 - LTR9B LTR ERV1 0 644 445 529 196 0 0 chr10 101723009 101723101 -38593664 - FLAM_A SINE Alu -11 131 40 786 202 75 5 chr10 101723191 101723417 -38593348 + MER58A DNA MER1_type 44 221 -3 560 254 43 0 chr10 101725402 101725540 -38591225 - L2 LINE L2 -1 3312 3169 2182 102 0 13 chr10 101726302 101726616 -38590149 - AluSg SINE Alu 0 310 1 251 258 39 31 chr10 101726819 101726839 -38589926 - L1MA5 LINE L1 -380 5920 5881 180 0 0 0 chr10 101726839 101726859 -38589906 + (CA)n Simple_repeat Simple_repeat 2 21 0 742 256 179 15 chr10 101726860 101727122 -38589643 - L1MC4a LINE L1 -1911 5897 5593 1603 154 3 31 chr10 101727482 101727799 -38588966 - AluSx SINE Alu 0 312 12 1043 173 140 16 chr10 101727894 101727908 -38588857 - MER58B DNA MER1_type -2080 340 329 1515 162 66 33 chr10 101727908 101728210 -38588555 - AluJb SINE Alu 0 312 1 1043 173 140 16 chr10 101728210 101728438 -38588327 - MER58B DNA MER1_type -2091 329 68 682 270 59 14 chr10 101728442 101728731 -38588034 - HAL1 LINE L1 -634 1873 1572 2299 107 0 0 chr10 101728735 101729044 -38587721 + AluSq SINE Alu 1 309 -4 666 205 0 0 chr10 101729049 101729161 -38587604 + FAM SINE Alu 1 112 -73 1547 187 10 7 chr10 101729164 101729474 -38587291 + AluJb SINE Alu 1 311 -1 1265 218 65 57 chr10 101729474 101729531 -38587234 - HAL1 LINE L1 -929 1578 1523 2044 112 7 7 chr10 101729531 101729825 -38586940 + AluSq SINE Alu 1 294 -19 1265 218 65 57 chr10 101729825 101730226 -38586539 - HAL1 LINE L1 -984 1523 1116 1845 141 7 7 chr10 101730260 101730551 -38586214 + AluSx SINE Alu 1 291 -21 415 237 113 50 chr10 101730694 101730994 -38585771 + L1ME4a LINE L1 5713 6031 -90 677 190 0 44 chr10 101731483 101731620 -38585145 + FLAM_A SINE Alu 1 131 -2 194 243 36 117 chr10 101732474 101732585 -38584180 + L2 LINE L2 3165 3266 -6 2412 72 17 0 chr10 101733164 101733455 -38583310 + AluSq SINE Alu 3 298 -15 545 143 0 0 chr10 101734001 101734085 -38582680 + FLAM SINE Alu 47 130 -13 1515 212 0 29 chr10 101734103 101734409 -38582356 + AluJo SINE Alu 1 297 -15 2140 118 14 0 chr10 101734792 101735080 -38581685 + AluSx SINE Alu 1 292 -20 225 287 53 144 chr10 101736326 101736467 -38580298 - MER5B DNA MER1_type 0 178 26 2013 125 3 33 chr10 101736467 101736770 -38579995 + AluSx SINE Alu 1 294 -18 2079 121 35 0 chr10 101736771 101737061 -38579704 + AluSq SINE Alu 1 300 -13 1931 135 0 39 chr10 101737067 101737379 -38579386 + AluJb SINE Alu 1 300 -12 225 287 53 144 chr10 101737379 101737416 -38579349 - MER5B DNA MER1_type -157 21 8 421 238 258 20 chr10 101737433 101737584 -38579181 + MER5A DNA MER1_type 3 189 0 470 276 109 45 chr10 101737658 101737879 -38578886 + MIR SINE MIR 10 244 -18 673 240 120 80 chr10 101738481 101738617 -38578148 + MIR SINE MIR 28 178 -84 1874 141 45 21 chr10 101738617 101738907 -38577858 + AluJo SINE Alu 6 302 -10 673 240 120 80 chr10 101738907 101738995 -38577770 + MIR SINE MIR 178 261 -1 237 288 96 0 chr10 101739686 101739759 -38577006 + MER5B DNA MER1_type 1 80 -98 199 163 70 0 chr10 101739783 101739826 -38576939 + L2 LINE L2 3268 3313 0 1928 159 36 3 chr10 101741469 101741771 -38574994 - AluJb SINE Alu 0 312 1 731 209 7 0 chr10 101743849 101743988 -38572777 + FLAM_C SINE Alu 3 142 -1 2081 125 0 26 chr10 101743991 101744193 -38572572 + AluSx SINE Alu 1 194 -118 2511 35 6 35 chr10 101744193 101744504 -38572261 + AluY SINE Alu 1 302 -9 2081 125 0 26 chr10 101744504 101744606 -38572159 + AluSx SINE Alu 194 297 -15 542 204 136 10 chr10 101746626 101746729 -38570036 + FLAM_A SINE Alu 1 116 -17 302 228 32 130 chr10 101746862 101746985 -38569780 + MIR SINE MIR 30 140 -68 465 310 89 6 chr10 101749274 101749432 -38567333 + MIR SINE MIR 20 190 -72 245 348 11 0 chr10 101750469 101750561 -38566204 + MIR SINE MIR 23 115 -93 2939 10 0 0 chr10 101751900 101752212 -38564553 + AluYb8 SINE Alu 1 312 -6 2215 104 0 3 chr10 101752241 101752538 -38564227 + AluSx SINE Alu 1 296 -16 565 248 35 35 chr10 101752951 101753096 -38563669 + MIR3 SINE MIR 63 207 -1 1061 144 17 6 chr10 101753105 101753285 -38563480 + MER2 DNA MER2_type 1 182 -163 2251 99 0 16 chr10 101753296 101753600 -38563165 - AluSx SINE Alu -13 299 1 359 183 17 0 chr10 101753703 101753763 -38563002 + L2 LINE L2 3251 3311 -2 2401 92 0 3 chr10 101754127 101754431 -38562334 - AluSp SINE Alu -10 303 1 2140 73 38 3 chr10 101755062 101755349 -38561416 + AluSc SINE Alu 1 297 -12 467 355 32 0 chr10 101755397 101755552 -38561213 + MIR3 SINE MIR 28 187 -21 22 0 0 0 chr10 101755795 101755817 -38560948 + GC_rich Low_complexity Low_complexity 1 22 0 180 77 0 0 chr10 101756591 101756617 -38560148 + (CAGCC)n Simple_repeat Simple_repeat 4 29 0 192 260 55 27 chr10 101756645 101756718 -38560047 + L2 LINE L2 2825 2899 -415 337 335 92 12 chr10 101756770 101756934 -38559831 + L2 LINE L2 2878 3054 -218 180 276 61 41 chr10 101757013 101757111 -38559654 + L2 LINE L2 3118 3217 -96 412 323 45 20 chr10 101757596 101757794 -38558971 - L2 LINE L2 -239 3033 2831 335 321 66 25 chr10 101757807 101757977 -38558788 + L1M4 LINE L1 4017 4201 -1945 2350 104 0 3 chr10 101757977 101758284 -38558481 + AluSq SINE Alu 1 306 -7 335 321 66 25 chr10 101758284 101758356 -38558409 + L1M4 LINE L1 4201 4269 -1877 1380 93 22 0 chr10 101758365 101758547 -38558218 + AluY SINE Alu 113 298 -13 1747 164 38 14 chr10 101758946 101759081 -38557684 + AluJb SINE Alu 1 131 -181 2249 99 16 32 chr10 101759081 101759395 -38557370 + AluSx SINE Alu 2 310 -2 1747 164 38 14 chr10 101759395 101759551 -38557214 + AluJb SINE Alu 131 299 -13 616 190 52 0 chr10 101759556 101759672 -38557093 - MER3 DNA MER1_type -85 124 3 2184 127 0 16 chr10 101759860 101760176 -38556589 - AluSx SINE Alu -1 311 1 21 0 0 0 chr10 101760178 101760199 -38556566 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 101760256 101760277 -38556488 + AT_rich Low_complexity Low_complexity 1 21 0 2480 92 3 0 chr10 101760280 101760583 -38556182 + AluSp SINE Alu 1 304 -9 2126 146 0 10 chr10 101761118 101761253 -38555512 + AluSx SINE Alu 1 136 -176 2274 126 0 0 chr10 101761253 101761554 -38555211 + AluSg SINE Alu 1 301 -9 2126 146 0 10 chr10 101761554 101761726 -38555039 + AluSx SINE Alu 136 305 -7 2569 60 3 0 chr10 101761798 101762099 -38554666 + AluSp SINE Alu 1 302 -11 3311 107 27 2 chr10 101762294 101762770 -38553995 - MER1A DNA MER1_type 0 529 42 2313 100 7 3 chr10 101763018 101763319 -38553446 + AluSx SINE Alu 1 302 -10 1438 148 0 35 chr10 101763465 101763694 -38553071 + AluJo SINE Alu 1 221 -91 998 154 6 13 chr10 101763696 101763852 -38552913 + AluJo/FRAM SINE Alu 144 298 -14 2323 89 3 0 chr10 101763853 101764144 -38552621 + AluSg SINE Alu 1 292 -18 2503 82 3 0 chr10 101764422 101764728 -38552037 + AluSq SINE Alu 1 307 -6 1172 145 6 0 chr10 101764728 101764894 -38551871 + AluJo/FRAM SINE Alu 134 300 -12 305 344 19 39 chr10 101764935 101765089 -38551676 + L1ME LINE L1 5521 5671 -450 1975 126 54 4 chr10 101766235 101766513 -38550252 + AluJb SINE Alu 1 292 -20 399 165 11 44 chr10 101766530 101766621 -38550144 + MLT1F1 LTR MaLR 35 122 -445 2759 167 30 42 chr10 101766624 101767224 -38549541 + L1MD3 LINE L1 7403 7995 0 912 121 0 15 chr10 101767474 101767606 -38549159 + AluSq/x SINE Alu 1 130 -182 301 135 0 0 chr10 101767606 101767658 -38549107 + Alu SINE Alu 250 301 -1 1237 248 71 39 chr10 101767679 101767828 -38548937 - L1MC/D LINE L1 -359 5803 5660 1818 183 24 9 chr10 101767828 101768166 -38548599 - MER2 DNA MER2_type 0 344 2 1237 248 71 39 chr10 101768166 101768496 -38548269 - L1MC/D LINE L1 -502 5660 5318 1712 141 102 3 chr10 101768496 101768780 -38547985 - AluSx SINE Alu 0 312 1 1237 248 71 39 chr10 101768780 101768894 -38547871 - L1MC/D LINE L1 -844 5318 5209 2577 59 0 3 chr10 101768996 101769300 -38547465 + AluY SINE Alu 1 303 -8 297 0 0 0 chr10 101769719 101769752 -38547013 + (TA)n Simple_repeat Simple_repeat 1 33 0 388 302 148 6 chr10 101769760 101769929 -38546836 - L1MC/D LINE L1 -1497 4649 4457 3117 136 21 57 chr10 101769934 101770134 -38546631 - L1MA9 LINE L1 -287 6025 5819 2151 129 10 0 chr10 101770134 101770437 -38546328 + AluSx SINE Alu 1 306 -6 3117 136 21 57 chr10 101770437 101770855 -38545910 - L1MA9 LINE L1 -493 5819 5429 2130 114 3 41 chr10 101770872 101771004 -38545761 + AluSq SINE Alu 6 141 -172 2341 114 0 3 chr10 101771004 101771311 -38545454 + AluSg SINE Alu 1 306 -4 2130 114 3 41 chr10 101771311 101771494 -38545271 + AluSq SINE Alu 141 309 -4 1313 139 34 14 chr10 101771540 101771749 -38545016 + AluJb SINE Alu 1 213 -99 1675 91 5 0 chr10 101771768 101771978 -38544787 - AluY SINE Alu -100 211 1 556 255 91 49 chr10 101772033 101772276 -38544489 - L1MC/D LINE L1 -1719 4427 4175 29 28 0 0 chr10 101772420 101772456 -38544309 + AT_rich Low_complexity Low_complexity 1 36 0 1716 182 11 3 chr10 101773261 101773547 -38543218 + AluJb SINE Alu 1 288 -24 2596 59 0 3 chr10 101773555 101773860 -38542905 + AluSq SINE Alu 1 304 -9 2126 146 0 10 chr10 101774395 101774530 -38542235 + AluSx SINE Alu 1 136 -176 2274 126 0 0 chr10 101774530 101774831 -38541934 + AluSg SINE Alu 1 301 -9 2126 146 0 10 chr10 101774831 101775003 -38541762 + AluSx SINE Alu 136 305 -7 2602 57 3 0 chr10 101775075 101775376 -38541389 + AluSp SINE Alu 1 302 -11 3311 107 27 2 chr10 101775571 101776047 -38540718 - MER1A DNA MER1_type 0 529 42 2313 100 7 3 chr10 101776295 101776596 -38540169 + AluSx SINE Alu 1 302 -10 1438 148 0 35 chr10 101776742 101776971 -38539794 + AluJo SINE Alu 1 221 -91 998 154 6 13 chr10 101776973 101777129 -38539636 + AluJo/FRAM SINE Alu 144 298 -14 2323 89 3 0 chr10 101777130 101777421 -38539344 + AluSg SINE Alu 1 292 -18 2266 118 10 0 chr10 101777699 101778004 -38538761 + AluSx SINE Alu 1 308 -4 1920 136 29 0 chr10 101778325 101778605 -38538160 - AluSx SINE Alu -24 288 1 251 242 32 16 chr10 101779276 101779338 -38537427 - MIR SINE MIR -15 247 185 2162 113 28 3 chr10 101779397 101779688 -38537077 + AluSx SINE Alu 4 301 -11 1571 123 140 56 chr10 101780153 101780438 -38536327 - AluSx SINE Alu -3 309 1 1673 167 33 11 chr10 101780464 101780739 -38536026 - AluJo SINE Alu -25 287 7 242 294 113 57 chr10 101780933 101781127 -38535638 + MIR SINE MIR 58 262 0 1681 148 78 0 chr10 101781323 101781594 -38535171 + AluSg SINE Alu 7 298 -12 1535 178 91 14 chr10 101783434 101783720 -38533045 - AluJo SINE Alu -4 308 1 800 165 8 0 chr10 101783728 101783849 -38532916 - FLAM_C SINE Alu -20 123 2 455 257 216 0 chr10 101783907 101784055 -38532710 - MER5A DNA MER1_type -6 183 4 277 256 35 23 chr10 101785121 101785207 -38531558 - MIR SINE MIR -165 97 11 1714 93 13 4 chr10 101785274 101785500 -38531265 - AluSg/x SINE Alu 0 310 83 2610 64 0 3 chr10 101785944 101786255 -38530510 + AluY SINE Alu 1 310 -1 190 257 129 14 chr10 101787828 101787898 -38528867 + MIR3 SINE MIR 85 162 -46 2364 82 7 3 chr10 101788290 101788596 -38528169 - AluSq SINE Alu -6 307 1 208 0 0 133 chr10 101789335 101789418 -38527347 + (AGGGGG)n Simple_repeat Simple_repeat 5 76 0 255 227 130 33 chr10 101789536 101789663 -38527102 + MIR SINE MIR 26 164 -65 2275 82 24 0 chr10 101789970 101790261 -38526504 - AluSx SINE Alu -14 298 1 1466 188 13 52 chr10 101790261 101790569 -38526196 - AluJo SINE Alu -16 296 1 1592 101 46 9 chr10 101790724 101790943 -38525822 + AluSx SINE Alu 11 237 -75 557 208 218 46 chr10 101790955 101791152 -38525613 - MIR SINE MIR -21 241 11 2394 85 3 0 chr10 101791372 101791665 -38525100 - AluSp SINE Alu -15 298 5 402 294 81 19 chr10 101791667 101791827 -38524938 - MIR SINE MIR -91 171 2 199 343 105 21 chr10 101792299 101792442 -38524323 + MIR SINE MIR 52 206 -56 25 0 0 0 chr10 101792454 101792479 -38524286 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr10 101792479 101792499 -38524266 + (TA)n Simple_repeat Simple_repeat 2 21 0 846 152 0 8 chr10 101792499 101792631 -38524134 - AluSg/x SINE Alu -20 290 160 1176 241 14 23 chr10 101792633 101793065 -38523700 - L1 LINE L1 -2664 3482 3055 878 169 0 44 chr10 101793070 101793230 -38523535 + AluSx SINE Alu 1 153 -159 1568 207 13 7 chr10 101793381 101793681 -38523084 + AluJb SINE Alu 6 307 -5 1832 169 51 3 chr10 101794498 101794794 -38521971 + AluJo SINE Alu 1 310 -2 216 0 0 0 chr10 101794819 101794843 -38521922 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2683 40 3 0 chr10 101795367 101795668 -38521097 + AluY SINE Alu 1 302 -9 505 231 86 0 chr10 101795927 101796044 -38520721 - FLAM_C SINE Alu -6 127 1 682 196 61 10 chr10 101796165 101796332 -38520433 + L1MB7 LINE L1 5948 6123 -51 2279 124 0 3 chr10 101796332 101796638 -38520127 - AluSx SINE Alu -7 305 1 682 196 61 10 chr10 101796638 101796661 -38520104 + L1MB7 LINE L1 6123 6143 -31 1703 188 13 23 chr10 101797044 101797212 -38519553 - AluJo SINE Alu -12 300 135 2233 89 7 10 chr10 101797212 101797505 -38519260 - AluSx SINE Alu -18 294 3 1703 188 13 23 chr10 101797505 101797639 -38519126 - AluJo SINE Alu -177 135 1 2087 113 4 0 chr10 101798403 101798678 -38518087 + AluSx SINE Alu 3 278 -34 274 23 47 0 chr10 101798680 101798723 -38518042 + (TAAAA)n Simple_repeat Simple_repeat 1 45 0 382 280 41 92 chr10 101799010 101799324 -38517441 + L2 LINE L2 2902 3199 -73 718 170 0 15 chr10 101799441 101799576 -38517189 + FLAM_C SINE Alu 1 133 0 2244 127 0 6 chr10 101799592 101799906 -38516859 + AluSx SINE Alu 1 312 0 366 225 144 0 chr10 101799906 101800017 -38516748 + MIR SINE MIR 136 262 0 1617 173 32 0 chr10 101800184 101800432 -38516333 + AluJo SINE Alu 3 258 -54 2328 73 3 3 chr10 101800805 101801094 -38515671 - AluSp SINE Alu -1 312 24 2200 124 10 0 chr10 101801221 101801528 -38515237 - AluSx SINE Alu -2 310 1 257 274 145 24 chr10 101802094 101802218 -38514547 - MIR3 SINE MIR -11 197 59 188 257 29 57 chr10 101802999 101803069 -38513696 + L2 LINE L2 3246 3313 0 1166 147 0 0 chr10 101803147 101803317 -38513448 - AluSx SINE Alu -22 290 121 1104 75 0 61 chr10 101803353 101803500 -38513265 - AluSx SINE Alu -174 138 1 25 83 0 0 chr10 101803504 101803564 -38513201 + AT_rich Low_complexity Low_complexity 1 60 0 636 156 17 89 chr10 101803681 101803783 -38512982 - Charlie5 DNA MER1_type 0 2585 2500 2319 97 3 0 chr10 101803783 101804081 -38512684 - AluSp SINE Alu -14 299 1 636 156 17 89 chr10 101804081 101804157 -38512608 - Charlie5 DNA MER1_type -85 2500 2420 1672 154 9 64 chr10 101804570 101804900 -38511865 - AluJb SINE Alu 0 312 1 2128 121 7 3 chr10 101805040 101805338 -38511427 + AluSx SINE Alu 1 299 -13 2433 87 0 10 chr10 101805338 101805646 -38511119 + AluY SINE Alu 1 306 -5 342 115 0 0 chr10 101805646 101805698 -38511067 + (TA)n Simple_repeat Simple_repeat 2 53 0 318 146 21 0 chr10 101805745 101805821 -38510944 - AluJb SINE Alu 0 309 233 1178 157 6 0 chr10 101805831 101806009 -38510756 - AluJb SINE Alu -133 179 1 317 274 0 0 chr10 101806140 101806202 -38510563 - MER2 DNA MER2_type 0 345 284 22 0 0 0 chr10 101806205 101806227 -38510538 + AT_rich Low_complexity Low_complexity 1 22 0 2090 121 0 4 chr10 101806227 101806537 -38510228 + AluSx SINE Alu 3 311 0 1144 113 5 56 chr10 101806538 101806622 -38510143 - MER2 DNA MER2_type -139 206 119 2111 142 10 0 chr10 101806622 101806917 -38509848 + AluSx SINE Alu 1 298 -14 1144 113 5 56 chr10 101806917 101807027 -38509738 - MER2 DNA MER2_type -226 119 22 697 173 0 50 chr10 101807668 101807807 -38508958 - FLAM_C SINE Alu 0 133 2 1250 117 12 0 chr10 101807817 101807988 -38508777 - AluSg/x SINE Alu -11 301 129 493 162 27 2 chr10 101808088 101808236 -38508529 + AluJb SINE Alu 120 303 -9 359 143 0 114 chr10 101808239 101808301 -38508464 + L1MB2 LINE L1 6076 6123 -48 2282 94 3 0 chr10 101808301 101808598 -38508167 - AluY SINE Alu -13 298 1 359 143 0 114 chr10 101808598 101808640 -38508125 + L1MB2 LINE L1 6123 6168 -3 2257 95 3 0 chr10 101808640 101808948 -38507817 - AluSp SINE Alu 0 309 1 497 276 63 59 chr10 101810113 101810225 -38506540 + MIR SINE MIR 35 145 -117 2337 117 0 0 chr10 101810225 101810525 -38506240 + AluSx SINE Alu 1 300 -12 497 276 63 59 chr10 101810525 101810633 -38506132 + MIR SINE MIR 145 256 -6 234 300 254 14 chr10 101810735 101810845 -38505920 + L2 LINE L2 2967 3049 -264 2503 53 7 0 chr10 101810845 101811145 -38505620 + AluY SINE Alu 1 302 -9 234 300 254 14 chr10 101811145 101811314 -38505451 + L2 LINE L2 3049 3313 0 290 289 41 50 chr10 101811324 101811445 -38505320 - MIR SINE MIR -115 147 28 2536 74 3 3 chr10 101812269 101812579 -38504186 - AluSp SINE Alu -3 310 1 360 230 0 58 chr10 101812669 101812741 -38504024 - MER2 DNA MER2_type 0 345 277 942 187 0 6 chr10 101812741 101812907 -38503858 + FRAM SINE Alu 2 166 0 360 230 0 58 chr10 101812907 101812921 -38503844 - MER2 DNA MER2_type -68 277 264 1740 116 11 7 chr10 101812934 101813209 -38503556 - MER2 DNA MER2_type -57 288 13 2421 86 0 0 chr10 101813228 101813529 -38503236 - AluY SINE Alu -10 301 1 25 31 0 0 chr10 101813562 101813594 -38503171 + AT_rich Low_complexity Low_complexity 1 32 0 280 171 93 26 chr10 101813757 101813974 -38502791 + AluJo SINE Alu 2 302 0 242 263 224 13 chr10 101816764 101816916 -38499849 - MIR SINE MIR -32 230 47 246 254 141 73 chr10 101817090 101817176 -38499589 + L1MC/D LINE L1 5723 5802 -2006 2126 155 0 0 chr10 101817176 101817479 -38499286 + AluSx SINE Alu 1 303 -9 246 254 141 73 chr10 101817479 101817569 -38499196 + L1MC/D LINE L1 5802 5911 -1897 724 241 103 5 chr10 101817586 101817789 -38498976 + MIR SINE MIR 30 252 -10 1649 166 4 0 chr10 101817793 101818040 -38498725 + AluJo SINE Alu 1 248 -64 244 304 9 35 chr10 101821169 101821284 -38495481 - L3 LINE CR1 -212 1365 1254 239 294 0 11 chr10 101821298 101821343 -38495422 + (TA)n Simple_repeat Simple_repeat 1 45 -46 189 0 0 0 chr10 101821343 101821364 -38495401 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2334 107 0 0 chr10 101821366 101821664 -38495101 - AluSq SINE Alu -15 298 1 239 294 0 11 chr10 101821664 101821707 -38495058 + (TA)n Simple_repeat Simple_repeat 46 91 0 1730 129 119 0 chr10 101821707 101822018 -38494747 + MER7A DNA MER2_type 1 346 0 225 346 75 0 chr10 101822033 101822166 -38494599 - L3 LINE CR1 -319 1258 1116 2368 115 3 0 chr10 101822364 101822676 -38494089 - AluSq SINE Alu 0 313 1 2244 73 0 7 chr10 101822719 101822991 -38493774 - AluSc SINE Alu -39 270 1 2341 81 3 0 chr10 101823205 101823510 -38493255 - AluSp SINE Alu 0 306 1 21 36 0 0 chr10 101823510 101823538 -38493227 + AT_rich Low_complexity Low_complexity 1 28 0 1859 179 0 3 chr10 101823540 101823831 -38492934 - AluJo SINE Alu -22 290 1 1589 195 19 29 chr10 101824041 101824354 -38492411 + AluJb SINE Alu 2 311 -1 2210 118 0 0 chr10 101824692 101824980 -38491785 - AluSx SINE Alu -24 288 1 2368 99 6 3 chr10 101825470 101825782 -38490983 + AluSq SINE Alu 1 313 0 977 192 23 6 chr10 101825786 101825958 -38490807 + FRAM SINE Alu 1 168 -8 235 233 111 11 chr10 101825970 101826060 -38490705 - L1MB3 LINE L1 -7 6176 6078 2358 107 0 3 chr10 101826125 101826434 -38490331 + AluSx SINE Alu 1 308 -4 1655 182 7 7 chr10 101826492 101826772 -38489993 + AluJb SINE Alu 9 288 -24 1034 80 0 0 chr10 101826880 101827005 -38489760 + AluSq/x SINE Alu 12 136 -176 1708 157 36 7 chr10 101827133 101827414 -38489351 + AluJb SINE Alu 19 307 -5 203 138 0 0 chr10 101828540 101828569 -38488196 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 976 289 16 4 chr10 101829017 101829270 -38487495 + MIR SINE MIR 7 262 0 509 319 62 12 chr10 101831664 101831905 -38484860 + MIR SINE MIR 10 262 0 225 111 56 0 chr10 101832415 101832451 -38484314 - MIR SINE MIR -60 148 111 2300 103 0 0 chr10 101832919 101833209 -38483556 + AluSx SINE Alu 1 290 -22 2229 123 0 3 chr10 101833245 101833545 -38483220 + AluSx SINE Alu 1 299 -13 2295 114 0 0 chr10 101833545 101833835 -38482930 + AluSx SINE Alu 1 290 -22 302 290 57 8 chr10 101834062 101834186 -38482579 + MIR SINE MIR 81 210 -52 264 59 0 0 chr10 101834778 101834812 -38481953 + (GGA)n Simple_repeat Simple_repeat 1 34 0 203 143 0 24 chr10 101835747 101835789 -38480976 + (TCC)n Simple_repeat Simple_repeat 3 43 0 2433 87 0 0 chr10 101836005 101836304 -38480461 + AluY SINE Alu 2 300 -11 2015 139 7 0 chr10 101836852 101837140 -38479625 - AluSx SINE Alu -22 290 1 269 295 205 11 chr10 101838040 101838230 -38478535 - MIR SINE MIR -29 233 7 352 289 25 8 chr10 101838524 101838645 -38478120 + MIR SINE MIR 103 225 -37 2433 87 3 0 chr10 101839452 101839750 -38477015 - AluSg SINE Alu -11 299 1 247 231 0 0 chr10 101840293 101840345 -38476420 + L2 LINE L2 3213 3264 -8 215 233 194 10 chr10 101840439 101840542 -38476223 + L2 LINE L2 3143 3264 -8 351 211 79 26 chr10 101840723 101840837 -38475928 + MIR SINE MIR 29 148 -60 258 237 23 107 chr10 101841770 101841985 -38474780 + MIR3 SINE MIR 7 203 -5 336 238 33 25 chr10 101842031 101842153 -38474612 + MIR SINE MIR 86 208 -54 275 182 52 13 chr10 101842170 101842247 -38474518 - MIR SINE MIR -146 116 37 2334 110 0 0 chr10 101843223 101843524 -38473241 - AluSc SINE Alu -8 301 1 2439 66 0 17 chr10 101843598 101843900 -38472865 - AluY SINE Alu -14 297 1 220 146 21 21 chr10 101845156 101845204 -38471561 - L2 LINE L2 -1 3271 3224 194 0 39 0 chr10 101845987 101846013 -38470752 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2165 111 0 0 chr10 101846015 101846294 -38470471 - AluSx SINE Alu -33 279 1 2253 136 0 0 chr10 101846316 101846617 -38470148 - AluSx SINE Alu -11 301 1 2205 138 0 0 chr10 101846639 101846943 -38469822 - AluSx SINE Alu -8 304 1 1342 185 44 0 chr10 101847246 101847473 -38469292 + AluJo SINE Alu 55 291 -21 2542 63 0 3 chr10 101847519 101847821 -38468944 - AluY SINE Alu -10 301 1 713 226 96 1 chr10 101847821 101848026 -38468739 - MIR SINE MIR -11 251 31 1307 116 0 45 chr10 101848707 101848905 -38467860 + AluSc SINE Alu 1 189 -120 2113 116 3 3 chr10 101848910 101849202 -38467563 + AluSx SINE Alu 20 311 -1 2064 152 3 0 chr10 101849233 101849543 -38467222 + AluSx SINE Alu 1 311 -1 345 113 0 0 chr10 101849556 101849609 -38467156 + L1MB2 LINE L1 6038 6090 -81 438 204 23 0 chr10 101849609 101849697 -38467068 + FRAM/FAM SINE Alu 1 87 -89 2019 124 67 0 chr10 101851651 101851934 -38464831 - AluSx SINE Alu -10 302 1 1755 104 5 0 chr10 101852203 101852448 -38464317 + AluSx SINE Alu 61 306 0 422 282 27 0 chr10 101852943 101853053 -38463712 - MIR3 SINE MIR -15 193 81 252 111 0 0 chr10 101853061 101853106 -38463659 + (GA)n Simple_repeat Simple_repeat 1 45 0 2033 143 7 3 chr10 101853400 101853700 -38463065 - AluJb SINE Alu -11 301 1 294 336 36 0 chr10 101853806 101853916 -38462849 - L3 LINE CR1 -87 1490 1377 1676 127 127 8 chr10 101853922 101854182 -38462583 + AluSg1 SINE Alu 1 291 -18 263 330 9 46 chr10 101854252 101854361 -38462404 + MIR SINE MIR 17 121 -141 459 48 0 0 chr10 101854557 101854619 -38462146 + (CA)n Simple_repeat Simple_repeat 2 63 0 2314 87 7 23 chr10 101854654 101854954 -38461811 - AluY SINE Alu -16 295 1 1066 62 169 34 chr10 101854984 101855162 -38461603 + Tigger2a DNA MER2_type 1 202 -232 915 154 0 0 chr10 101855162 101855298 -38461467 - FLAM_C SINE Alu -7 136 1 1461 137 8 0 chr10 101855298 101855532 -38461233 + Tigger2a DNA MER2_type 209 444 0 234 279 224 12 chr10 101855584 101855702 -38461063 - L3 LINE CR1 -255 1322 1230 2145 105 10 39 chr10 101855702 101856007 -38460758 - AluSq SINE Alu -17 296 1 234 279 224 12 chr10 101856007 101856049 -38460716 - L3 LINE CR1 -347 1230 1128 226 293 98 0 chr10 101856336 101856418 -38460347 + MIR SINE MIR 30 119 -89 475 270 32 8 chr10 101856955 101857081 -38459684 - MER5B DNA MER1_type -49 129 1 208 264 0 0 chr10 101857316 101857369 -38459396 + MIR SINE MIR 16 68 -194 2408 98 0 3 chr10 101857971 101858278 -38458487 + AluSq SINE Alu 1 306 -7 314 299 75 37 chr10 101858288 101858422 -38458343 + MIR SINE MIR 47 185 -77 2087 148 0 3 chr10 101858512 101858810 -38457955 - AluJo SINE Alu -13 299 3 373 303 25 17 chr10 101858821 101858940 -38457825 - MIR SINE MIR -56 206 87 182 291 35 23 chr10 101859175 101859261 -38457504 + L2 LINE L2 3133 3219 -53 423 259 106 26 chr10 101859313 101859502 -38457263 + MIR SINE MIR 47 250 -12 387 232 0 0 chr10 101859466 101859548 -38457217 - MIR SINE MIR 0 262 181 * 1952 151 3 7 chr10 101860396 101860695 -38456070 - AluJb SINE Alu -14 298 1 47 47 0 12 chr10 101861615 101861679 -38455086 + AT_rich Low_complexity Low_complexity 1 65 -20 700 195 0 0 chr10 101861679 101861797 -38454968 - FLAM_C SINE Alu -15 118 1 47 47 0 12 chr10 101861797 101861818 -38454947 + AT_rich Low_complexity Low_complexity 65 85 0 2143 154 0 0 chr10 101861881 101862192 -38454573 + AluSx SINE Alu 1 311 -1 249 236 0 0 chr10 101862254 101862309 -38454456 + MIR3 SINE MIR 143 197 -11 183 175 50 25 chr10 101862474 101862514 -38454251 + MIR SINE MIR 111 151 -111 217 264 22 33 chr10 101862896 101862987 -38453778 + L2 LINE L2 3013 3102 -211 192 97 0 0 chr10 101863120 101863151 -38453614 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 201 197 0 99 chr10 101863210 101863281 -38453484 - L2 LINE L2 -216 3056 2993 2351 113 0 0 chr10 101863715 101864025 -38452740 + AluSq SINE Alu 1 310 -3 242 207 0 0 chr10 101864386 101864444 -38452321 + AluJ/monomer SINE Alu 244 301 -1 1643 238 107 27 chr10 101864445 101864806 -38451959 - MLT1G LTR MaLR -52 538 160 2415 76 7 0 chr10 101864806 101865096 -38451669 - AluSp SINE Alu -21 292 1 1643 238 107 27 chr10 101865096 101865270 -38451495 - MLT1G LTR MaLR -430 160 1 2193 131 7 0 chr10 101865370 101865675 -38451090 + AluSx SINE Alu 1 307 -5 2250 112 10 0 chr10 101866759 101867063 -38449702 + AluSx SINE Alu 1 307 -5 2388 99 3 0 chr10 101867145 101867447 -38449318 + AluSq SINE Alu 1 303 -10 2281 130 0 0 chr10 101867448 101867756 -38449009 + AluSx SINE Alu 3 310 -2 297 109 0 0 chr10 101867767 101867822 -38448943 + (TTA)n Simple_repeat Simple_repeat 2 56 0 2021 69 4 27 chr10 101867931 101868192 -38448573 - AluSx SINE Alu -57 255 1 2310 79 11 0 chr10 101868194 101868499 -38448266 - AluSc SINE Alu 0 308 1 2405 99 0 13 chr10 101870305 101870642 -38446123 - AluSg SINE Alu 0 310 1 25 0 0 0 chr10 101870642 101870667 -38446098 + AT_rich Low_complexity Low_complexity 1 25 0 697 165 0 0 chr10 101870667 101870782 -38445983 - FLAM_C SINE Alu -17 116 2 206 313 87 26 chr10 101871805 101871920 -38444845 + MIR3 SINE MIR 33 154 -54 565 261 57 13 chr10 101871964 101872121 -38444644 - MIR SINE MIR -97 165 2 2188 130 0 0 chr10 101872438 101872739 -38444026 - AluSq SINE Alu -12 301 1 534 313 12 6 chr10 101872743 101872906 -38443859 - HERV16 LTR ERVL -2153 2843 2680 2117 142 3 0 chr10 101872924 101873235 -38443530 - AluJb SINE Alu 0 312 1 1978 243 7 5 chr10 101873279 101873727 -38443038 + ERVL LTR ERVL 4097 4545 -1219 2234 119 0 0 chr10 101873899 101874194 -38442571 + AluSx SINE Alu 5 299 -13 2292 83 59 0 chr10 101874929 101875219 -38441546 + AluSx SINE Alu 1 307 -5 258 330 20 10 chr10 101876265 101876365 -38440400 + MIR3 SINE MIR 79 179 -29 2031 103 7 51 chr10 101876397 101876723 -38440042 - AluSx SINE Alu 0 316 4 1953 171 0 0 chr10 101876733 101877043 -38439722 - AluJo SINE Alu -2 310 1 262 311 27 0 chr10 101877847 101877921 -38438844 + MIR SINE MIR 117 192 -70 461 250 0 0 chr10 101878313 101878413 -38438352 + MER96B DNA MER1_type? 6 105 -312 2300 96 7 3 chr10 101878413 101878706 -38438059 - AluSx SINE Alu -18 294 1 526 173 43 14 chr10 101878706 101878845 -38437920 - MER96B DNA MER1_type? -81 336 194 1830 174 3 16 chr10 101878885 101879201 -38437564 - AluJb SINE Alu 0 312 1 1487 187 126 107 chr10 101879451 101880090 -38436675 + L1MDa LINE L1 26 839 -5701 811 160 0 0 chr10 101880105 101880230 -38436535 - FLAM_C SINE Alu -7 136 12 2747 214 30 36 chr10 101880238 101880913 -38435852 + L1MB7 LINE L1 4408 5079 -1067 2064 109 6 58 chr10 101880913 101881224 -38435541 - AluSg SINE Alu -13 297 3 2747 214 30 36 chr10 101881224 101881353 -38435412 + L1MB7 LINE L1 5079 5207 -939 1370 131 7 181 chr10 101881459 101881751 -38435014 + L1MB7 LINE L1 5362 5561 -681 1915 153 10 16 chr10 101881751 101882064 -38434701 - AluJb SINE Alu -1 311 1 1370 131 7 181 chr10 101882064 101882191 -38434574 + L1MB7 LINE L1 5561 5708 -534 2360 86 3 10 chr10 101882191 101882494 -38434271 - AluSx SINE Alu -11 301 1 1271 150 11 9 chr10 101882494 101882699 -38434066 + L1MB7 LINE L1 5936 6129 -42 2281 121 0 0 chr10 101882699 101883004 -38433761 + AluSx SINE Alu 1 305 -7 1271 150 11 9 chr10 101883004 101883025 -38433740 + L1MB7 LINE L1 6129 6148 -23 537 278 133 79 chr10 101883573 101883926 -38432839 + MLT1J2 LTR MaLR 61 432 -18 194 309 215 20 chr10 101883933 101884082 -38432683 - L2 LINE L2 0 3272 3095 1226 125 16 21 chr10 101884219 101884411 -38432354 - AluSq SINE Alu -17 296 106 734 96 0 0 chr10 101884472 101884566 -38432199 - AluSq SINE Alu -213 99 6 267 261 0 0 chr10 101884596 101884665 -38432100 + L1 LINE L1 3587 3655 -2491 396 0 0 0 chr10 101884690 101884734 -38432031 + (CA)n Simple_repeat Simple_repeat 2 45 0 1481 199 66 48 chr10 101884773 101885215 -38431550 + L1ME1 LINE L1 5598 6047 -119 849 111 111 0 chr10 101885215 101885341 -38431424 - AluJo/FRAM SINE Alu -4 308 169 551 107 0 12 chr10 101885342 101885417 -38431348 + AluSp/q SINE Alu 225 300 -13 189 0 0 0 chr10 101885417 101885438 -38431327 + (CA)n Simple_repeat Simple_repeat 2 22 0 251 239 45 68 chr10 101885558 101885646 -38431119 - MIR SINE MIR -11 251 166 559 321 0 0 chr10 101885664 101885823 -38430942 - MIR SINE MIR -40 222 64 2004 142 0 17 chr10 101886181 101886476 -38430289 - AluJo SINE Alu -22 290 1 1682 105 40 79 chr10 101886476 101886631 -38430134 - AluSx SINE Alu -47 265 124 477 0 0 0 chr10 101886631 101886684 -38430081 + (TG)n Simple_repeat Simple_repeat 2 54 0 1682 105 40 79 chr10 101886684 101886804 -38429961 - AluSx SINE Alu -188 124 1 208 339 137 33 chr10 101886958 101887141 -38429624 + MIR SINE MIR 47 248 -14 2327 105 7 0 chr10 101887400 101887706 -38429059 + AluSx SINE Alu 2 309 -3 1617 163 10 47 chr10 101888363 101888664 -38428101 + AluJb SINE Alu 1 290 -22 1832 142 0 0 chr10 101888697 101888958 -38427807 + AluSx SINE Alu 51 311 -1 2301 113 0 0 chr10 101889010 101889311 -38427454 + AluY SINE Alu 1 301 -10 2308 70 0 11 chr10 101889311 101889634 -38427131 + AluY SINE Alu 1 320 0 1027 147 58 0 chr10 101889882 101890073 -38426692 - AluSc SINE Alu -18 291 90 1761 125 66 7 chr10 101890181 101890453 -38426312 - AluSx SINE Alu -24 288 1 2092 131 13 19 chr10 101890455 101890769 -38425996 - AluJb SINE Alu 0 312 1 378 267 35 17 chr10 101891206 101891322 -38425443 + MIR SINE MIR 32 149 -59 2044 147 10 0 chr10 101891368 101891660 -38425105 + AluSx SINE Alu 1 295 -17 471 245 105 21 chr10 101892295 101892438 -38424327 + MIR3 SINE MIR 5 159 -49 354 147 162 0 chr10 101893841 101893909 -38422856 - AluJ/FLAM SINE Alu -222 80 2 593 46 58 0 chr10 101893909 101893996 -38422769 + L1MB3 LINE L1 6092 6183 0 868 263 82 4 chr10 101894043 101894275 -38422490 + MIR SINE MIR 3 252 -10 1783 192 10 0 chr10 101894461 101894768 -38421997 + AluJb SINE Alu 1 310 -2 226 167 208 14 chr10 101895382 101895454 -38421311 + MER103 DNA DNA 38 123 -43 23 0 0 0 chr10 101896453 101896476 -38420289 + GC_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 101896520 101896546 -38420219 + GC_rich Low_complexity Low_complexity 1 26 0 222 264 0 23 chr10 101897166 101897253 -38419512 + (CGG)n Simple_repeat Simple_repeat 2 86 0 287 272 10 25 chr10 101897337 101897538 -38419227 + C-rich Low_complexity Low_complexity 1 197 0 260 235 94 0 chr10 101898110 101898195 -38418570 - MIR SINE MIR -53 209 117 1824 136 4 18 chr10 101898335 101898615 -38418150 - AluSx SINE Alu -36 276 1 248 273 174 50 chr10 101898817 101898938 -38417827 + L2 LINE L2 2956 3091 -181 834 161 0 0 chr10 101899339 101899457 -38417308 - FLAM_C SINE Alu -15 118 1 311 167 61 30 chr10 101899460 101899526 -38417239 - L1MCa LINE L1 -4363 2063 1996 1036 93 0 0 chr10 101899526 101899655 -38417110 - AluSg/x SINE Alu -12 300 172 1691 79 0 0 chr10 101899671 101899874 -38416891 - AluSx SINE Alu -93 219 17 563 285 0 21 chr10 101899927 101900071 -38416694 + MIR SINE MIR 1 141 -121 311 246 0 0 chr10 101900079 101900140 -38416625 - L2 LINE L2 -11 3302 3242 2364 67 3 0 chr10 101900151 101900456 -38416309 - AluY SINE Alu 0 306 1 361 317 0 0 chr10 101900474 101900578 -38416187 - MIR SINE MIR -13 249 146 977 164 21 76 chr10 101900732 101900963 -38415802 + MLT1A2 LTR MaLR 155 622 -4 2361 102 6 6 chr10 101901035 101901348 -38415417 - AluSq SINE Alu 0 313 1 392 325 65 12 chr10 101901683 101901808 -38414957 - MIR SINE MIR -8 254 116 2378 104 0 0 chr10 101901808 101902115 -38414650 + AluSc SINE Alu 1 307 -2 392 325 65 12 chr10 101902115 101902158 -38414607 - MIR SINE MIR -146 116 77 885 165 0 17 chr10 101902483 101902659 -38414106 - MER96B DNA MER1_type? -242 175 3 2408 88 0 0 chr10 101903298 101903605 -38413160 + AluSc SINE Alu 1 307 -2 2238 123 0 3 chr10 101903614 101903916 -38412849 + AluSx SINE Alu 1 301 -11 321 211 11 53 chr10 101904239 101904334 -38412431 + L2 LINE L2 2631 2721 -593 320 279 66 124 chr10 101904456 101904850 -38411915 + L2 LINE L2 2827 3197 -75 244 273 143 13 chr10 101904929 101905006 -38411759 - MIR SINE MIR -155 107 21 23 33 0 0 chr10 101905279 101905309 -38411456 + GC_rich Low_complexity Low_complexity 1 30 0 567 187 179 15 chr10 101906173 101906307 -38410458 + MIR SINE MIR 11 166 -96 220 314 0 0 chr10 101906492 101906543 -38410222 - L2 LINE L2 0 3272 3222 916 99 16 0 chr10 101906630 101906751 -38410014 - FLAM_C SINE Alu -20 123 1 267 287 93 0 chr10 101906756 101906848 -38409917 - MIR SINE MIR -66 142 40 2283 116 3 10 chr10 101907952 101908263 -38408502 + AluSx SINE Alu 1 309 -3 386 315 22 28 chr10 101908802 101908983 -38407782 - MIR3 SINE MIR -6 202 23 2334 105 0 3 chr10 101909293 101909598 -38407167 + AluSq SINE Alu 1 304 -9 330 276 141 55 chr10 101909627 101909790 -38406975 + MIR SINE MIR 86 262 0 29 0 0 0 chr10 101910310 101910339 -38406426 + AT_rich Low_complexity Low_complexity 1 29 0 767 184 145 6 chr10 101910617 101910796 -38405969 + MER2 DNA MER2_type 7 210 -135 2869 16 3 3 chr10 101910837 101911155 -38405610 - AluYb8 SINE Alu 0 318 1 2464 62 7 0 chr10 101911158 101911450 -38405315 - AluSp SINE Alu -19 294 1 322 241 62 27 chr10 101911541 101911653 -38405112 - MIR SINE MIR -70 192 77 405 297 123 20 chr10 101912066 101912261 -38404504 - MIR SINE MIR -41 221 7 510 233 114 33 chr10 101912270 101912469 -38404296 + MIR SINE MIR 30 253 -4 693 222 23 28 chr10 101912495 101912671 -38404094 + MIR SINE MIR 24 198 -64 238 267 0 0 chr10 101913169 101913229 -38403536 + MIR SINE MIR 57 116 -146 2250 104 0 14 chr10 101913311 101913608 -38403157 + AluSg SINE Alu 5 297 -13 1132 143 0 77 chr10 101913711 101913749 -38403016 + AluJo SINE Alu 84 123 -189 1080 0 0 0 chr10 101913749 101913869 -38402896 + (CA)n Simple_repeat Simple_repeat 2 121 0 1132 143 0 77 chr10 101913869 101914026 -38402739 + AluJo SINE Alu 123 264 -48 236 71 48 0 chr10 101915951 101915993 -38400772 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2098 116 25 0 chr10 101915997 101916272 -38400493 - AluSx SINE Alu -30 282 1 686 209 177 46 chr10 101916275 101916557 -38400208 - MER46C DNA MER2_type -1 337 19 511 335 170 0 chr10 101919241 101919459 -38397306 + L1ME LINE L1 5269 5523 -598 2337 91 0 28 chr10 101919460 101919780 -38396985 + AluSx SINE Alu 2 312 0 352 261 123 58 chr10 101919783 101919801 -38396964 + L1ME LINE L1 5598 5613 -508 1597 128 4 9 chr10 101919801 101920027 -38396738 + AluSg/x SINE Alu 85 309 -3 352 261 123 58 chr10 101920027 101920146 -38396619 + L1ME LINE L1 5613 5744 -377 2407 88 3 0 chr10 101920411 101920708 -38396057 + AluSg SINE Alu 3 300 -10 1818 134 7 49 chr10 101920796 101921128 -38395637 + AluSp SINE Alu 1 313 0 540 178 18 4 chr10 101921178 101921280 -38395485 - L1MD3 LINE L1 0 7995 7896 899 227 0 0 chr10 101921280 101921443 -38395322 - FRAM SINE Alu -2 164 2 540 178 18 4 chr10 101921443 101921485 -38395280 - L1MD3 LINE L1 -99 7896 7641 2375 79 3 0 chr10 101921604 101921894 -38394871 - AluSp SINE Alu -22 291 1 24 32 0 0 chr10 101922459 101922490 -38394275 + AT_rich Low_complexity Low_complexity 1 31 0 1882 170 23 0 chr10 101922550 101922850 -38393915 + AluJo SINE Alu 1 307 -5 2458 88 0 0 chr10 101923584 101923881 -38392884 + AluSx SINE Alu 1 297 -15 895 213 63 59 chr10 101924078 101924159 -38392606 - MIR SINE MIR -17 245 166 2022 149 0 0 chr10 101924159 101924454 -38392311 - AluJb SINE Alu -17 295 1 895 213 63 59 chr10 101924454 101924611 -38392154 - MIR SINE MIR -96 166 6 506 251 214 28 chr10 101924809 101925024 -38391741 - MIR SINE MIR -4 258 4 1528 120 18 9 chr10 101925199 101925416 -38391349 - AluSx SINE Alu -93 219 1 21 0 0 0 chr10 101925427 101925448 -38391317 + AT_rich Low_complexity Low_complexity 1 21 0 1692 176 28 10 chr10 101925455 101925745 -38391020 + AluJo SINE Alu 1 295 -17 417 300 123 18 chr10 101926102 101926272 -38390493 - MIR SINE MIR -73 189 2 713 231 21 91 chr10 101926335 101926523 -38390242 + MIR SINE MIR 38 238 -24 1715 121 100 18 chr10 101926523 101926804 -38389961 + AluSq SINE Alu 2 305 -8 1482 203 3 20 chr10 101926811 101927106 -38389659 + AluJo SINE Alu 15 304 -8 713 231 21 91 chr10 101927106 101927151 -38389614 + MIR SINE MIR 244 262 0 2537 75 0 3 chr10 101927479 101927787 -38388978 + AluY SINE Alu 1 307 -4 782 163 0 37 chr10 101927803 101927938 -38388827 + FLAM_A SINE Alu 1 130 -3 517 172 52 60 chr10 101928061 101928195 -38388570 - AluJb SINE Alu -20 292 160 2229 113 0 0 chr10 101928806 101929097 -38387668 + AluSx SINE Alu 1 291 -21 318 278 0 14 chr10 101930026 101930098 -38386667 - MIR SINE MIR -170 92 22 23 33 0 0 chr10 101930394 101930424 -38386341 + AT_rich Low_complexity Low_complexity 1 30 0 2514 78 3 0 chr10 101930425 101930734 -38386031 + AluY SINE Alu 1 310 -1 2397 85 3 0 chr10 101930742 101931036 -38385729 + AluSq SINE Alu 1 295 -18 356 283 53 33 chr10 101931150 101931302 -38385463 - MIR SINE MIR 0 262 108 180 308 31 15 chr10 101932063 101932128 -38384637 + MIR SINE MIR 20 85 -177 * 489 278 45 45 chr10 101932072 101932248 -38384517 + MER5A DNA MER1_type 13 188 -1 1160 134 67 67 chr10 101932288 101932468 -38384297 + AluJo SINE Alu 89 271 -41 2230 109 20 0 chr10 101932468 101932771 -38383994 - AluSx SINE Alu -3 309 1 1160 134 67 67 chr10 101932771 101932814 -38383951 + AluJo SINE Alu 270 312 0 424 211 61 0 chr10 101933019 101933133 -38383632 + MER103 DNA DNA 38 158 -8 375 336 14 58 chr10 101933448 101933671 -38383094 + L1ME LINE L1 3 215 -5855 189 311 81 47 chr10 101933830 101933978 -38382787 + L3 LINE CR1 1419 1571 -6 1698 141 14 28 chr10 101934179 101934463 -38382302 + AluJo SINE Alu 22 301 -11 708 213 138 113 chr10 101934463 101934659 -38382106 + L1MC5 LINE L1 7308 7498 -463 961 143 0 0 chr10 101934659 101934792 -38381973 + FLAM_C SINE Alu 1 133 0 708 213 138 113 chr10 101934792 101935024 -38381741 + L1MC5 LINE L1 7498 7758 -203 2665 44 0 13 chr10 101935024 101935339 -38381426 + AluY SINE Alu 1 311 0 708 213 138 113 chr10 101935339 101935502 -38381263 + L1MC5 LINE L1 7758 7915 -46 323 132 0 19 chr10 101935521 101935574 -38381191 + L1MB3 LINE L1 2876 2927 -3219 * 387 307 117 0 chr10 101935558 101935721 -38381044 + L1MB3 LINE L1 2857 3038 -3108 2303 82 0 0 chr10 101935723 101936014 -38380751 + AluSg SINE Alu 3 293 -17 2651 32 0 0 chr10 101936014 101936325 -38380440 + AluY SINE Alu 1 311 0 2051 117 7 16 chr10 101936377 101936685 -38380080 + L1M4c LINE L1 18 322 -6062 1049 195 64 40 chr10 101936683 101936981 -38379784 + L1MB3 LINE L1 4025 4329 -1817 * 1804 156 3 10 chr10 101936981 101937276 -38379489 + AluJo SINE Alu 1 293 -19 4768 142 41 63 chr10 101937278 101938183 -38378582 + L1MB3 LINE L1 5198 6063 -120 1917 137 14 0 chr10 101938183 101938475 -38378290 + AluSx SINE Alu 1 296 -16 4768 142 41 63 chr10 101938475 101938591 -38378174 + L1MB3 LINE L1 6063 6180 -3 2049 113 7 0 chr10 101938782 101939083 -38377682 - AluSx SINE Alu -9 303 1 623 227 85 14 chr10 101939083 101939224 -38377541 - MLT1A2 LTR MaLR -222 152 2 1051 147 0 28 chr10 101939262 101939439 -38377326 + AluJo SINE Alu 125 296 -16 5103 216 65 40 chr10 101939472 101940285 -38376480 + L1MC4 LINE L1 6624 7416 -626 2146 95 0 3 chr10 101940285 101940581 -38376184 + AluSg SINE Alu 1 295 -15 5103 216 65 40 chr10 101940581 101940663 -38376102 + L1MC4 LINE L1 7416 7495 -547 2087 117 0 7 chr10 101940663 101940971 -38375794 + AluSq SINE Alu 1 306 -7 779 185 0 0 chr10 101940973 101941103 -38375662 + FLAM_C SINE Alu 1 130 -3 5103 216 65 40 chr10 101941103 101941578 -38375187 + L1MC4 LINE L1 7495 8035 -7 1783 116 30 0 chr10 101941578 101941846 -38374919 + AluSq SINE Alu 1 276 -37 2005 135 3 0 chr10 101942006 101942302 -38374463 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 101942370 101942392 -38374373 + AT_rich Low_complexity Low_complexity 1 22 0 778 234 139 81 chr10 101943460 101943813 -38372952 + MLT1J2 LTR MaLR 1 383 -67 2040 127 0 7 chr10 101943813 101944121 -38372644 + AluSx SINE Alu 1 306 -6 778 234 139 81 chr10 101944121 101944177 -38372588 + MLT1J2 LTR MaLR 383 434 -16 2195 97 3 0 chr10 101944297 101944597 -38372168 - AluSx SINE Alu -9 303 3 804 205 32 5 chr10 101944718 101944930 -38371835 + AluSp SINE Alu 103 319 0 717 264 72 10 chr10 101944938 101945146 -38371619 + ERVL LTR ERVL 4630 4850 -914 2299 82 0 0 chr10 101945146 101945438 -38371327 - AluSx SINE Alu -18 294 3 1312 183 35 16 chr10 101945440 101945697 -38371068 - MLT1E LTR MaLR -6 587 326 2215 103 3 0 chr10 101945699 101946001 -38370764 - AluSp SINE Alu -10 303 1 699 290 18 27 chr10 101946158 101946379 -38370386 - MIR SINE MIR -8 254 36 193 333 11 21 chr10 101946601 101946694 -38370071 - MIR SINE MIR -71 137 46 203 369 41 25 chr10 101946759 101946881 -38369884 - L2 LINE L2 0 3313 3190 1851 142 10 26 chr10 101947035 101947345 -38369420 + AluJo SINE Alu 1 305 -7 1885 145 0 10 chr10 101949054 101949357 -38367408 + AluSx SINE Alu 1 300 -12 2382 86 0 3 chr10 101949712 101950025 -38366740 + AluSx SINE Alu 1 312 0 1216 197 39 45 chr10 101951126 101951259 -38365506 + AluJo SINE Alu 5 137 -175 1971 75 29 0 chr10 101951259 101951538 -38365227 + AluSp SINE Alu 17 303 -10 1216 197 39 45 chr10 101951538 101951714 -38365051 + AluJo SINE Alu 137 312 0 373 156 46 83 chr10 101952317 101952426 -38364339 - MER113 DNA MER1_type? -126 395 291 1895 119 3 26 chr10 101952550 101952860 -38363905 + AluSx SINE Alu 1 303 -9 412 113 21 103 chr10 101953068 101953114 -38363651 - Charlie1b DNA MER1_type -2243 518 483 2088 108 14 7 chr10 101953114 101953411 -38363354 + AluSx SINE Alu 1 299 -13 412 113 21 103 chr10 101953411 101953461 -38363304 - Charlie1b DNA MER1_type -2278 483 430 * 1019 160 70 30 chr10 101953458 101953658 -38363107 - Charlie1b DNA MER1_type -315 208 1 236 147 0 0 chr10 101953783 101953817 -38362948 + Alu SINE Alu 3 36 -267 525 158 0 0 chr10 101953817 101953899 -38362866 + AluJb SINE Alu 206 287 -25 34 0 0 0 chr10 101953899 101953933 -38362832 + AT_rich Low_complexity Low_complexity 1 34 0 2379 67 0 0 chr10 101954003 101954300 -38362465 - AluY SINE Alu -10 301 5 216 221 58 77 chr10 101954387 101954491 -38362274 - MIR SINE MIR -17 245 144 1362 279 76 27 chr10 101954746 101955233 -38361532 + MLT1J LTR MaLR 1 511 0 2233 102 0 0 chr10 101955257 101955562 -38361203 - AluSx SINE Alu -7 305 1 876 244 90 4 chr10 101955596 101955830 -38360935 + MIR SINE MIR 3 256 -6 1421 178 19 19 chr10 101956342 101956651 -38360114 + AluJb SINE Alu 1 309 -3 950 111 29 6 chr10 101956656 101956828 -38359937 + GA-rich Low_complexity Low_complexity 2 177 0 2270 64 41 0 chr10 101956944 101957239 -38359526 + AluSc SINE Alu 1 307 -2 22 0 0 0 chr10 101958677 101958699 -38358066 + GC_rich Low_complexity Low_complexity 1 22 0 370 186 124 52 chr10 101959331 101959428 -38357337 - L2 LINE L2 0 3313 3210 532 177 129 65 chr10 101959478 101959602 -38357163 - FLAM_C SINE Alu -1 132 1 661 55 83 9 chr10 101959605 101959714 -38357051 - LTR23 LTR ERV1 -134 303 187 409 149 40 14 chr10 101959772 101959846 -38356919 - LTR23 LTR ERV1 -244 193 118 671 153 8 17 chr10 101959890 101960008 -38356757 - FLAM_C SINE Alu -16 127 11 335 107 21 0 chr10 101960038 101960097 -38356668 + Alu SINE Alu 2 46 -253 1140 82 7 0 chr10 101960197 101960344 -38356421 + AluSp SINE Alu 82 229 -84 410 138 0 55 chr10 101960354 101960463 -38356302 + (GAAA)n Simple_repeat Simple_repeat 3 105 0 594 161 73 16 chr10 101960463 101960587 -38356178 - LTR23 LTR ERV1 -303 134 4 313 161 0 8 chr10 101960595 101960651 -38356114 + FLAM_A SINE Alu 72 114 -19 665 117 17 75 chr10 101960679 101960799 -38355966 + LTR23 LTR ERV1 118 230 -207 184 231 26 0 chr10 101960922 101960961 -38355804 + L2 LINE L2 3221 3260 -12 1582 81 0 5 chr10 101961380 101961591 -38355174 + AluSq SINE Alu 80 289 -24 2038 109 0 36 chr10 101961645 101961947 -38354818 + AluSx SINE Alu 1 291 -21 1815 120 40 0 chr10 101961986 101962262 -38354503 + AluSg SINE Alu 3 289 -21 574 295 95 20 chr10 101962264 101962464 -38354301 + MIR SINE MIR 4 218 -44 228 308 0 0 chr10 101962489 101962554 -38354211 + MIR SINE MIR 195 259 -3 513 170 89 9 chr10 101963254 101963366 -38353399 - MIR SINE MIR -134 128 8 246 402 55 9 chr10 101963369 101963588 -38353177 + L2 LINE L2 2511 2739 -575 441 0 0 0 chr10 101963596 101963645 -38353120 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 420 208 13 0 chr10 101963669 101963746 -38353019 - FRAM/FAM SINE Alu -103 73 1 195 42 0 0 chr10 101963897 101963921 -38352844 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 3479 162 141 35 chr10 101963921 101964316 -38352449 + MER4D LTR ERV1 2 354 -310 1887 150 0 0 chr10 101964316 101964622 -38352143 + AluJb SINE Alu 1 306 -6 3479 162 141 35 chr10 101964622 101964701 -38352064 + MER4D LTR ERV1 354 423 -241 339 25 0 0 chr10 101964701 101964741 -38352024 + (TG)n Simple_repeat Simple_repeat 1 40 0 3479 162 141 35 chr10 101964741 101965086 -38351679 + MER4D LTR ERV1 423 664 0 1493 146 23 53 chr10 101965087 101965389 -38351376 - AluJo SINE Alu -19 293 1 23 0 0 0 chr10 101966670 101966693 -38350072 + AT_rich Low_complexity Low_complexity 1 23 0 2335 86 0 0 chr10 101966879 101967183 -38349582 + AluSg SINE Alu 1 304 -6 1840 145 3 22 chr10 101967427 101967744 -38349021 - AluJo SINE Alu -1 311 1 1739 154 10 3 chr10 101968244 101968536 -38348229 + AluJb SINE Alu 1 294 -18 340 158 18 0 chr10 101968962 101969019 -38347746 - MLT1G1 LTR MaLR 0 595 538 1124 79 0 0 chr10 101969029 101969169 -38347596 + AluY SINE Alu 1 140 -171 2115 79 10 10 chr10 101969169 101969461 -38347304 + AluY SINE Alu 1 292 -19 483 263 25 38 chr10 101969531 101969691 -38347074 - MIR3 SINE MIR -39 169 12 250 328 132 35 chr10 101970092 101970366 -38346399 - L2 LINE L2 -8 3264 2950 1105 201 139 98 chr10 101970366 101970556 -38346209 + LTR40c LTR ERVL 1 182 -283 2111 117 3 0 chr10 101970556 101970856 -38345909 + AluSx SINE Alu 1 301 -11 1105 201 139 98 chr10 101970856 101971112 -38345653 + LTR40c LTR ERVL 182 465 0 250 328 132 35 chr10 101971112 101971173 -38345592 - L2 LINE L2 -322 2950 2896 199 384 12 0 chr10 101971359 101971445 -38345320 - L2 LINE L2 -8 3305 3219 200 302 0 0 chr10 101971503 101971556 -38345209 - L2 LINE L2 -4 3268 3216 * 647 256 70 0 chr10 101971555 101971711 -38345054 - MIR3 SINE MIR -10 198 32 511 248 23 39 chr10 101972491 101972620 -38344145 - MIR SINE MIR 0 262 136 2190 94 7 0 chr10 101972620 101972917 -38343848 + AluSx SINE Alu 1 299 -13 878 133 13 27 chr10 101972917 101973101 -38343664 + AluSg/x SINE Alu 132 313 0 353 179 13 77 chr10 101973103 101973181 -38343584 - MIR SINE MIR -115 147 75 2339 93 0 0 chr10 101973527 101973838 -38342927 - AluSx SINE Alu 0 312 2 987 186 31 0 chr10 101973960 101974154 -38342611 - MLT2B1 LTR ERVL -320 200 1 211 246 35 35 chr10 101974324 101974381 -38342384 + MIR SINE MIR 14 70 -192 1491 218 102 47 chr10 101974418 101974517 -38342248 + MLT1G LTR MaLR 72 164 -426 1722 130 9 62 chr10 101974517 101974840 -38341925 + AluJb SINE Alu 3 308 -4 1491 218 102 47 chr10 101974840 101975144 -38341621 + MLT1G LTR MaLR 164 497 -93 189 0 0 0 chr10 101975155 101975176 -38341589 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 388 189 0 53 chr10 101975191 101975286 -38341479 + MER74B LTR ERVL 65 154 -468 1587 154 22 39 chr10 101975288 101975648 -38341117 - AluJo SINE Alu 0 355 1 2283 186 43 36 chr10 101975650 101976118 -38340647 + MER74A LTR ERVL 88 558 0 556 125 42 21 chr10 101976118 101976214 -38340551 + MLT1G LTR MaLR 493 590 0 259 292 138 31 chr10 101976218 101976348 -38340417 + MIR SINE MIR 72 215 -47 355 89 0 0 chr10 101976351 101976396 -38340369 + MER57B LTR ERV1 1 45 -389 2243 102 0 16 chr10 101976399 101976576 -38340189 - AluSx SINE Alu -2 310 132 207 0 0 0 chr10 101976576 101976599 -38340166 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2157 82 11 0 chr10 101976599 101976878 -38339887 - AluSc SINE Alu -27 282 1 2243 102 0 16 chr10 101976878 101977014 -38339751 - AluSx SINE Alu -178 134 1 1254 222 73 107 chr10 101977162 101977685 -38339080 - LTR41 LTR ERVL -32 741 237 1105 157 0 4 chr10 101977701 101977913 -38338852 + AluJb SINE Alu 1 304 -8 736 203 21 52 chr10 101977936 101978128 -38338637 - LTR41 LTR ERVL -587 186 1 1904 150 9 31 chr10 101978441 101978754 -38338011 + MLT1A1 LTR MaLR 1 308 -57 3260 198 24 81 chr10 101978754 101979781 -38336984 - LTR5 LTR ERVK 0 969 1 1904 150 9 31 chr10 101979781 101979793 -38336972 + MLT1A1 LTR MaLR 308 319 -46 749 185 0 0 chr10 101979807 101979926 -38336839 + FLAM_C SINE Alu 2 120 -23 189 74 0 0 chr10 101979946 101979973 -38336792 + (CAG)n Simple_repeat Simple_repeat 2 28 0 354 80 0 40 chr10 101979973 101980023 -38336742 + MLT1A1 LTR MaLR 318 365 0 734 271 14 64 chr10 101980117 101980249 -38336516 - ERVL LTR ERVL -400 5364 5252 2231 93 13 0 chr10 101980249 101980549 -38336216 - AluSx SINE Alu -4 308 5 734 271 14 64 chr10 101980549 101980697 -38336068 - ERVL LTR ERVL -512 5252 5098 634 229 41 166 chr10 101980704 101980771 -38335994 + MLT1E LTR MaLR 1 75 -518 2013 113 0 3 chr10 101980771 101981084 -38335681 - AluSx SINE Alu 0 312 1 634 229 41 166 chr10 101981084 101981382 -38335383 + MLT1E LTR MaLR 75 321 -272 832 90 0 0 chr10 101981387 101981498 -38335267 + AluSp SINE Alu 1 111 -202 386 306 50 8 chr10 101981655 101981776 -38334989 - MER5A DNA MER1_type 0 189 64 897 191 0 0 chr10 101981831 101982026 -38334739 + FRAM SINE Alu 1 193 0 1913 116 3 30 chr10 101982171 101982472 -38334293 - AluJb SINE Alu -13 299 7 698 239 88 57 chr10 101982635 101983007 -38333758 - MLT1H LTR MaLR -1 548 94 1799 108 58 4 chr10 101983007 101983284 -38333481 - AluSx SINE Alu -20 292 1 698 239 88 57 chr10 101983284 101983369 -38333396 - MLT1H LTR MaLR -455 94 13 283 217 101 0 chr10 101983657 101983726 -38333039 + MIR3 SINE MIR 106 181 -27 288 0 0 0 chr10 101983726 101983758 -38333007 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2225 79 0 0 chr10 101983761 101984041 -38332724 - AluSg SINE Alu -30 280 1 911 96 0 37 chr10 101984050 101984186 -38332579 - FLAM_C SINE Alu -2 131 1 2260 96 0 6 chr10 101984363 101984677 -38332088 - AluSx SINE Alu 0 312 1 185 229 0 21 chr10 101984886 101984934 -38331831 + L2 LINE L2 3261 3307 -6 2342 100 0 10 chr10 101985507 101985527 -38331238 - AluSq SINE Alu 0 313 294 217 0 0 0 chr10 101985527 101985551 -38331214 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 2342 100 0 10 chr10 101985551 101985839 -38330926 - AluSq SINE Alu -19 294 1 1003 191 5 35 chr10 101985841 101986040 -38330725 - MIR SINE MIR -34 228 36 263 154 0 0 chr10 101986436 101986475 -38330290 + Alu SINE Alu 1 39 -260 1152 99 0 0 chr10 101986475 101986626 -38330139 + AluSg/x SINE Alu 159 309 -3 234 0 0 0 chr10 101986676 101986702 -38330063 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1459 130 0 14 chr10 101986836 101987052 -38329713 + AluSg/x SINE Alu 91 303 -7 763 115 28 156 chr10 101987052 101987270 -38329495 - L1MB7 LINE L1 -235 5949 5760 2592 72 0 0 chr10 101987274 101987580 -38329185 - AluY SINE Alu -5 306 1 2216 127 0 0 chr10 101987584 101987883 -38328882 - AluSx SINE Alu -13 299 1 3849 111 31 49 chr10 101987891 101988580 -38328185 - L1MB3 LINE L1 0 6183 5506 2108 96 50 3 chr10 101988580 101988862 -38327903 - AluSg SINE Alu -15 295 1 3849 111 31 49 chr10 101988862 101988892 -38327873 - L1MB3 LINE L1 -677 5506 5477 227 259 147 59 chr10 101988892 101989062 -38327703 - L2 LINE L2 0 3313 3129 2063 142 11 62 chr10 101989076 101989111 -38327654 + L1PA15 LINE L1 5751 5786 -379 2063 147 0 10 chr10 101989111 101989425 -38327340 + AluJb SINE Alu 1 311 -1 2063 142 11 62 chr10 101989425 101989825 -38326940 + L1PA15 LINE L1 5786 6164 -1 2362 109 3 0 chr10 101989839 101990150 -38326615 + AluSx SINE Alu 1 312 0 1621 191 22 82 chr10 101990159 101990610 -38326155 + MLT1F LTR MaLR 119 542 0 2310 103 0 13 chr10 101991406 101991571 -38325194 - AluSx SINE Alu -14 298 137 2297 79 0 10 chr10 101991571 101991881 -38324884 - AluY SINE Alu 0 311 1 2310 103 0 13 chr10 101991881 101992017 -38324748 - AluSx SINE Alu -175 137 1 1110 152 32 92 chr10 101992293 101992358 -38324407 + AluJo SINE Alu 78 145 -167 2555 73 0 0 chr10 101992358 101992658 -38324107 + AluSc SINE Alu 1 300 -9 1110 152 32 92 chr10 101992658 101992842 -38323923 + AluJo SINE Alu 145 312 0 328 296 186 53 chr10 101992932 101993204 -38323561 - L2 LINE L2 0 3272 2945 2229 124 3 0 chr10 101993204 101993502 -38323263 + AluSq SINE Alu 5 303 -10 328 296 186 53 chr10 101993502 101993567 -38323198 - L2 LINE L2 -327 2945 2890 400 278 98 23 chr10 101994021 101994154 -38322611 - MIR SINE MIR 0 262 120 375 232 111 0 chr10 101994272 101994371 -38322394 - L1MD1 LINE L1 -9 6233 6124 302 219 0 47 chr10 101994383 101994447 -38322318 - L2 LINE L2 -26 3287 3227 * 436 273 184 3 chr10 101994417 101994721 -38322044 - L2 LINE L2 -1062 2252 1894 387 250 128 64 chr10 101995243 101995431 -38321334 + MIR SINE MIR 28 227 -35 224 256 0 0 chr10 101996708 101996751 -38320014 - L2 LINE L2 0 3313 3271 270 83 0 0 chr10 101996814 101996850 -38319915 - U2 snRNA snRNA -152 36 1 347 298 14 57 chr10 101996893 101997034 -38319731 - L2 LINE L2 -181 3091 2957 1400 135 161 56 chr10 101997911 101998178 -38318587 - AluJb SINE Alu -17 295 1 23 33 0 0 chr10 101998276 101998306 -38318459 + AT_rich Low_complexity Low_complexity 1 30 0 348 243 133 48 chr10 101998307 101998644 -38318121 - L1MC5 LINE L1 -207 7754 7389 4875 64 2 3 chr10 101999943 102000583 -38316182 + L1PA7 LINE L1 5514 6152 -2 2212 119 10 7 chr10 102000664 102000966 -38315799 + AluSx SINE Alu 7 309 -3 198 103 0 0 chr10 102001212 102001241 -38315524 + (TGG)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 102001320 102001344 -38315421 + AT_rich Low_complexity Low_complexity 1 24 0 502 264 57 52 chr10 102002102 102002295 -38314470 + MIR SINE MIR 34 227 -35 511 243 187 4 chr10 102003244 102003479 -38313286 - L2 LINE L2 -62 3251 2974 319 352 159 11 chr10 102003778 102003960 -38312805 - MIR SINE MIR -17 245 37 2354 83 0 19 chr10 102003975 102004287 -38312478 - AluSc SINE Alu -3 306 1 784 254 21 0 chr10 102004307 102004496 -38312269 + MIR SINE MIR 1 193 -69 300 250 23 11 chr10 102004709 102004797 -38311968 - MER5A DNA MER1_type -45 144 56 309 51 0 0 chr10 102004822 102004861 -38311904 + (TA)n Simple_repeat Simple_repeat 1 39 0 2271 112 3 0 chr10 102004861 102005156 -38311609 - AluSx SINE Alu -16 296 1 2714 194 129 50 chr10 102005156 102005489 -38311276 - L1MC4 LINE L1 -9 8033 7728 1956 158 3 7 chr10 102005489 102005787 -38310978 - AluJo SINE Alu -3 309 13 2714 194 129 50 chr10 102005787 102006639 -38310126 - L1MC4 LINE L1 -314 7728 6704 287 299 56 9 chr10 102006737 102006844 -38309921 - MIR SINE MIR -92 170 59 559 300 97 9 chr10 102007791 102008018 -38308747 - MIR SINE MIR 0 262 16 371 289 138 58 chr10 102009451 102009539 -38307226 - MIR SINE MIR -14 248 168 2142 144 0 6 chr10 102009539 102009851 -38306914 - AluJb SINE Alu -2 310 1 371 289 138 58 chr10 102009851 102009987 -38306778 - MIR SINE MIR -94 168 6 251 282 86 67 chr10 102010787 102010996 -38305769 + Charlie8 DNA MER1_type 187 399 -2018 422 196 123 86 chr10 102011166 102011329 -38305436 + MER112 DNA MER1_type 1 169 -91 663 208 97 53 chr10 102012224 102012450 -38304315 + MIR SINE MIR 2 237 -25 2022 156 0 7 chr10 102013036 102013337 -38303428 - AluJb SINE Alu -13 299 1 348 332 81 0 chr10 102013548 102013712 -38303053 - MIR SINE MIR -63 145 19 1519 183 66 16 chr10 102014056 102014373 -38302392 - MLT1A1 LTR MaLR -8 357 25 22 0 0 0 chr10 102016833 102016855 -38299910 + AT_rich Low_complexity Low_complexity 1 22 0 2522 67 7 0 chr10 102017044 102017344 -38299421 - AluSp SINE Alu -11 302 1 463 200 50 43 chr10 102017352 102017492 -38299273 - L1ME4a LINE L1 0 6121 5981 1347 116 0 0 chr10 102017501 102017682 -38299083 - AluSg/x SINE Alu -9 303 123 22 0 0 0 chr10 102017682 102017704 -38299061 + AT_rich Low_complexity Low_complexity 1 22 0 195 238 0 0 chr10 102019818 102019860 -38296905 + L2 LINE L2 3223 3264 -8 303 213 53 0 chr10 102020107 102020182 -38296583 - MIR SINE MIR -33 229 151 692 273 77 0 chr10 102021277 102021471 -38295294 - MIR SINE MIR -1 261 53 469 213 263 0 chr10 102022208 102022368 -38294397 + MIR SINE MIR 7 208 -54 1568 192 48 0 chr10 102022375 102022666 -38294099 + AluJb SINE Alu 6 310 -2 191 173 96 0 chr10 102022891 102022943 -38293822 - L2 LINE L2 -2 3311 3255 324 272 278 0 chr10 102022964 102023133 -38293632 - MIR SINE MIR 0 262 47 307 255 0 90 chr10 102023246 102023427 -38293338 + MLT1J LTR MaLR 71 267 -244 535 206 113 21 chr10 102024658 102024799 -38291966 - MER5B DNA MER1_type -1 177 24 720 178 0 0 chr10 102024841 102024970 -38291795 - FLAM_C SINE Alu -10 133 5 308 161 0 0 chr10 102024976 102025032 -38291733 - MER5A DNA MER1_type -114 75 20 466 227 227 6 chr10 102027111 102027283 -38289482 + MER63A DNA MER1_type 1 210 0 248 337 43 0 chr10 102027839 102027931 -38288834 - MIR3 SINE MIR -30 178 83 217 240 147 13 chr10 102028841 102028876 -38287889 - MIR SINE MIR -66 196 167 2322 111 0 10 chr10 102028876 102029183 -38287582 - AluSx SINE Alu -8 304 1 217 240 147 13 chr10 102029183 102029222 -38287543 - MIR SINE MIR -95 167 112 349 225 50 0 chr10 102029411 102029491 -38287274 - MIR SINE MIR -116 146 63 182 294 118 20 chr10 102030380 102030482 -38286283 - L2 LINE L2 -20 3252 3141 201 250 0 0 chr10 102030498 102030546 -38286219 - L2 LINE L2 -18 3295 3248 739 231 134 19 chr10 102030597 102030813 -38285952 - MIR SINE MIR 0 262 22 382 269 19 0 chr10 102030876 102030980 -38285785 - MIR SINE MIR -147 115 10 223 253 11 53 chr10 102031435 102031530 -38285235 - L2 LINE L2 -8 3264 3174 503 266 158 18 chr10 102031769 102031991 -38284774 + MIR SINE MIR 2 254 -8 2029 155 0 3 chr10 102032035 102032331 -38284434 + AluJo SINE Alu 1 295 -17 2610 78 0 0 chr10 102032336 102032645 -38284120 + AluSx SINE Alu 1 309 -3 339 291 39 24 chr10 102033361 102033488 -38283277 - L1M4 LINE L1 -3441 2705 2577 389 204 23 23 chr10 102033488 102033576 -38283189 + Charlie1 DNA MER1_type 1 88 -2673 * 586 200 62 0 chr10 102033560 102033690 -38283075 + Charlie1 DNA MER1_type 2144 2281 -480 1163 134 0 12 chr10 102033691 102033863 -38282902 + AluJo SINE Alu 1 170 -142 2154 118 42 37 chr10 102033966 102034336 -38282429 + Charlie1 DNA MER1_type 2328 2702 -59 2386 93 0 13 chr10 102034336 102034636 -38282129 - AluSx SINE Alu -16 296 1 2154 118 42 37 chr10 102034636 102034697 -38282068 + Charlie1 DNA MER1_type 2702 2761 0 303 311 34 19 chr10 102034699 102034905 -38281860 - L1M4 LINE L1 -3564 2582 2374 376 241 72 54 chr10 102035057 102035223 -38281542 + MIR SINE MIR 29 197 -65 191 298 57 48 chr10 102035439 102035563 -38281202 + MIR SINE MIR 97 221 -41 2519 77 0 0 chr10 102035739 102036038 -38280727 - AluSc SINE Alu -10 299 1 829 195 131 9 chr10 102036805 102037026 -38279739 + MIR SINE MIR 15 262 0 236 313 62 31 chr10 102037118 102037278 -38279487 + L2 LINE L2 2624 2788 -526 333 289 107 8 chr10 102037406 102037527 -38279238 + L2 LINE L2 3138 3270 -2 755 267 30 10 chr10 102037797 102037999 -38278766 - MIR SINE MIR -10 252 47 187 296 0 104 chr10 102038116 102038231 -38278534 - L2 LINE L2 -56 3257 3155 488 304 58 21 chr10 102038304 102038495 -38278270 + MIR SINE MIR 20 217 -45 211 272 120 0 chr10 102039469 102039561 -38277204 + MIR3 SINE MIR 55 157 -51 454 155 95 101 chr10 102040642 102040790 -38275975 - MIR SINE MIR -32 230 84 1891 167 0 3 chr10 102040923 102041210 -38275555 - AluJo SINE Alu -26 286 1 776 127 8 22 chr10 102041240 102041374 -38275391 - FLAM_C SINE Alu 0 133 2 348 24 0 0 chr10 102041376 102041417 -38275348 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2233 106 0 0 chr10 102041417 102041699 -38275066 - AluSx SINE Alu -30 282 1 557 281 32 27 chr10 102041836 102042021 -38274744 - MIR SINE MIR -57 205 20 194 218 218 0 chr10 102042580 102042623 -38274142 + MIR SINE MIR 102 134 -128 2350 86 3 29 chr10 102042623 102042938 -38273827 + AluSq SINE Alu 1 307 -6 194 218 218 0 chr10 102042938 102042981 -38273784 + MIR SINE MIR 134 207 -55 602 185 76 19 chr10 102043031 102043178 -38273587 + MER3 DNA MER1_type 1 110 -73 1754 182 0 24 chr10 102043178 102043475 -38273290 - AluJo SINE Alu -22 290 1 602 185 76 19 chr10 102043475 102043489 -38273276 + MER3 DNA MER1_type 110 122 -61 1626 208 39 6 chr10 102043505 102043861 -38272904 - L1MB5 LINE L1 -10 6164 5797 365 171 0 0 chr10 102043861 102043931 -38272834 + MER3 DNA MER1_type 136 205 -4 381 301 48 57 chr10 102044130 102044359 -38272406 - MIR SINE MIR -35 227 1 251 347 8 8 chr10 102044946 102045067 -38271698 + CT-rich Low_complexity Low_complexity 1 121 0 1776 155 0 4 chr10 102045074 102045338 -38271427 - AluJb SINE Alu -49 263 1 323 259 23 69 chr10 102045669 102045800 -38270965 + MER94 DNA DNA 1 125 -9 188 224 41 0 chr10 102046087 102046136 -38270629 - MIR SINE MIR -67 141 91 2318 110 0 0 chr10 102046209 102046510 -38270255 + AluSx SINE Alu 1 301 -11 423 219 10 128 chr10 102047145 102047226 -38269539 + MIR3 SINE MIR 15 61 -147 2225 127 0 0 chr10 102047226 102047526 -38269239 - AluSx SINE Alu -12 300 1 423 219 10 128 chr10 102047526 102047640 -38269125 + MIR3 SINE MIR 61 187 -21 764 302 36 8 chr10 102047882 102048130 -38268635 + MIR SINE MIR 8 262 0 1341 176 191 103 chr10 102048261 102048407 -38268358 - MLT1F1 LTR MaLR -49 518 386 1932 146 9 43 chr10 102048407 102048730 -38268035 + AluJo SINE Alu 1 312 0 1341 176 191 103 chr10 102048730 102049059 -38267706 - MLT1F1 LTR MaLR -181 386 1 307 313 94 25 chr10 102049059 102049260 -38267505 - MIR SINE MIR -10 252 38 231 313 23 18 chr10 102049417 102049548 -38267217 + MIR SINE MIR 20 192 -70 192 288 190 12 chr10 102050282 102050445 -38266320 - L2 LINE L2 -9 3304 3113 396 269 110 21 chr10 102050698 102050843 -38265922 + MIR SINE MIR 22 179 -83 998 186 15 93 chr10 102050898 102051067 -38265698 - MLT1E1 LTR MaLR -3 651 509 2120 138 7 0 chr10 102051067 102051358 -38265407 + AluSx SINE Alu 3 295 -17 998 186 15 93 chr10 102051358 102051457 -38265308 - MLT1E1 LTR MaLR -145 509 404 401 178 0 11 chr10 102051457 102051547 -38265218 + CT-rich Low_complexity Low_complexity 1 89 0 615 107 0 0 chr10 102051574 102051658 -38265107 - AluJ/FLAM SINE Alu -227 85 2 367 150 12 12 chr10 102051673 102051753 -38265012 + CT-rich Low_complexity Low_complexity 4 83 0 1025 110 0 0 chr10 102051760 102051896 -38264869 - FLAM_C SINE Alu -2 141 6 436 194 11 15 chr10 102051964 102052147 -38264618 - MLT1E1 LTR MaLR -391 263 13 1180 170 73 129 chr10 102052152 102052588 -38264177 - MER97a DNA MER1_type? -63 831 423 2143 96 3 51 chr10 102052588 102052902 -38263863 - AluSx SINE Alu -13 299 1 1180 170 73 129 chr10 102052902 102052947 -38263818 - MER97a DNA MER1_type? -471 423 377 2496 163 38 39 chr10 102052954 102053525 -38263240 + L1MC2 LINE L1 5732 6333 0 1419 236 49 14 chr10 102053538 102053886 -38262879 - MER97c DNA MER1_type? -717 373 14 3138 132 36 11 chr10 102054021 102054575 -38262190 - L1MC1 LINE L1 -1 6332 5765 1006 234 52 31 chr10 102054575 102054861 -38261904 - MLT1L LTR MaLR -319 296 5 1844 131 4 15 chr10 102054874 102055141 -38261624 - AluJo SINE Alu -16 296 33 677 282 41 4 chr10 102056378 102056623 -38260142 - L1MEd LINE L1 -4971 1148 895 306 304 27 9 chr10 102056715 102056827 -38259938 - L1MEd LINE L1 -5266 853 740 713 270 4 9 chr10 102056903 102057129 -38259636 + L1MEd LINE L1 941 1165 -4954 678 296 107 16 chr10 102057313 102057631 -38259134 - MLT1J LTR MaLR -163 348 2 438 316 35 6 chr10 102057724 102057898 -38258867 - MER20B DNA MER1_type -604 179 1 531 228 8 16 chr10 102058592 102058719 -38258046 + MIR SINE MIR 36 161 -101 385 205 123 55 chr10 102059797 102059994 -38256771 - MIR SINE MIR -9 253 42 460 303 34 100 chr10 102060178 102060528 -38256237 - L2 LINE L2 -2 3311 2985 1514 133 115 43 chr10 102060672 102060951 -38255814 - AluJo SINE Alu -13 299 1 299 311 0 0 chr10 102061408 102061498 -38255267 - MER5A DNA MER1_type -96 93 4 241 294 168 42 chr10 102061498 102061539 -38255226 - L2 LINE L2 -557 2757 2724 2227 123 3 19 chr10 102061539 102061857 -38254908 + AluSq SINE Alu 1 313 0 241 294 168 42 chr10 102061857 102062016 -38254749 - L2 LINE L2 -590 2724 2530 1666 177 6 9 chr10 102062036 102062358 -38254407 - L1MB4 LINE L1 -12 6168 5848 275 152 0 0 chr10 102062360 102062406 -38254359 - L1MB4 LINE L1 -469 5714 5669 1717 142 0 4 chr10 102062609 102062855 -38253910 - AluSx SINE Alu -25 287 43 527 128 0 0 chr10 102062856 102062934 -38253831 - AluS SINE Alu -234 79 2 581 269 37 65 chr10 102063022 102063238 -38253527 + MER58C DNA MER1_type 6 215 0 198 0 0 0 chr10 102063347 102063369 -38253396 + (T)n Simple_repeat Simple_repeat 1 22 0 2386 91 7 0 chr10 102064491 102064787 -38251978 - AluSx SINE Alu -14 298 1 416 177 44 62 chr10 102064788 102064901 -38251864 - L2 LINE L2 -7 3306 3196 372 22 0 0 chr10 102064960 102065005 -38251760 + (TG)n Simple_repeat Simple_repeat 2 46 0 304 322 98 17 chr10 102065781 102065955 -38250810 + MER5A DNA MER1_type 1 188 -1 279 114 0 0 chr10 102066132 102066176 -38250589 + (TC)n Simple_repeat Simple_repeat 1 44 0 2190 123 0 7 chr10 102066176 102066476 -38250289 - AluSx SINE Alu -14 298 1 1503 167 91 18 chr10 102066482 102066757 -38250008 - AluJb SINE Alu -17 295 1 542 322 137 0 chr10 102066760 102066971 -38249794 - L3 LINE CR1 -200 1377 1138 637 261 32 28 chr10 102066982 102067200 -38249565 - MIR SINE MIR -39 223 5 552 250 32 26 chr10 102067175 102067295 -38249470 - MIR SINE MIR -104 158 35 * 1369 197 10 47 chr10 102067295 102067594 -38249171 - AluJo SINE Alu -23 289 2 552 250 32 26 chr10 102067594 102067629 -38249136 - MIR SINE MIR -227 35 2 879 146 8 0 chr10 102067974 102068097 -38248668 - FLAM_C SINE Alu -19 124 1 971 235 135 82 chr10 102068185 102068725 -38248040 + MLT1L LTR MaLR 42 610 -5 2105 127 24 0 chr10 102068934 102069226 -38247539 - AluSx SINE Alu -13 299 1 688 223 87 11 chr10 102069231 102069415 -38247350 + MIR SINE MIR 47 244 -18 950 267 97 39 chr10 102070507 102070664 -38246101 - MLT1L LTR MaLR -21 594 448 2244 119 3 10 chr10 102070664 102070976 -38245789 - AluSp SINE Alu -1 312 3 950 267 97 39 chr10 102070976 102071334 -38245431 - MLT1L LTR MaLR -167 448 3 346 282 162 0 chr10 102071791 102071933 -38244832 + MIR SINE MIR 20 184 -78 511 184 16 109 chr10 102072242 102072285 -38244480 - L1ME3 LINE L1 0 6162 6117 2359 111 0 0 chr10 102072285 102072583 -38244182 - AluSx SINE Alu -14 298 1 511 184 16 109 chr10 102072583 102072734 -38244031 - L1ME3 LINE L1 -45 6117 5981 503 227 238 0 chr10 102073590 102073775 -38242990 + MER102b DNA MER1_type 103 331 -10 222 188 109 31 chr10 102074023 102074087 -38242678 + MER5A DNA MER1_type 2 70 -119 247 281 48 48 chr10 102074679 102074825 -38241940 + MER96 DNA MER1_type? 25 170 -5 826 207 18 0 chr10 102074924 102075093 -38241672 - MER5B DNA MER1_type -6 172 1 2086 121 24 0 chr10 102075199 102075489 -38241276 - AluSx SINE Alu -15 297 1 206 329 13 0 chr10 102075647 102075723 -38241042 - MIR SINE MIR -123 139 63 426 85 0 0 chr10 102076078 102076137 -38240628 + (CA)n Simple_repeat Simple_repeat 1 59 0 899 222 102 14 chr10 102076665 102076881 -38239884 + L1MEc LINE L1 36 270 -6126 * 1006 169 92 20 chr10 102076878 102077127 -38239638 + L1MEc LINE L1 1944 2210 -4186 223 293 67 0 chr10 102077193 102077268 -38239497 + MIR SINE MIR 106 185 -77 212 164 0 27 chr10 102077526 102077599 -38239166 + T-rich Low_complexity Low_complexity 2 72 0 282 164 49 0 chr10 102077602 102077663 -38239102 - L1MB5 LINE L1 0 6174 6111 1087 151 0 0 chr10 102077663 102077815 -38238950 + AluJb SINE Alu 3 154 -158 1054 146 18 0 chr10 102077932 102078096 -38238669 + AluSg/x SINE Alu 144 310 -2 3677 268 80 18 chr10 102078097 102078511 -38238254 - L2 LINE L2 -417 2897 2510 2038 135 10 16 chr10 102078511 102078814 -38237951 + AluSx SINE Alu 1 301 -11 3677 268 80 18 chr10 102078814 102079722 -38237043 - L2 LINE L2 -804 2510 1485 3287 25 0 0 chr10 102079722 102080118 -38236647 + L1PA3 LINE L1 5759 6154 -1 3677 268 80 18 chr10 102080118 102080151 -38236614 - L2 LINE L2 -1829 1485 1456 450 255 56 25 chr10 102081133 102081294 -38235471 + MIR SINE MIR 8 173 -89 10904 35 16 90 chr10 102081468 102082964 -38233801 - SVA Other Other 0 1386 1 405 0 0 0 chr10 102083640 102083685 -38233080 + (TC)n Simple_repeat Simple_repeat 2 46 0 277 235 119 113 chr10 102084168 102084384 -38232381 - HAL1 LINE L1 0 2507 2287 2495 91 0 0 chr10 102084384 102084693 -38232072 - AluSx SINE Alu -3 309 1 277 235 119 113 chr10 102084693 102084812 -38231953 - HAL1 LINE L1 -220 2287 2170 233 206 16 0 chr10 102084816 102084879 -38231886 - HAL1 LINE L1 -1 2506 2443 513 276 106 25 chr10 102084983 102085182 -38231583 + L2 LINE L2 3098 3312 -1 241 241 17 0 chr10 102085582 102085640 -38231125 - L2 LINE L2 -23 3290 3232 1562 117 5 0 chr10 102085995 102086201 -38230564 + AluSx SINE Alu 1 207 -105 378 179 0 145 chr10 102086304 102086449 -38230316 - L1 LINE L1 -1446 4700 4577 1010 227 122 65 chr10 102086509 102086893 -38229872 + MLT1J2 LTR MaLR 7 412 -38 393 295 18 0 chr10 102087312 102087424 -38229341 + MIR3 SINE MIR 81 194 -14 950 291 113 13 chr10 102087434 102087743 -38229022 - MER102b DNA MER1_type 0 341 2 252 132 59 0 chr10 102088894 102088962 -38227803 + CT-rich Low_complexity Low_complexity 5 76 0 332 326 94 1 chr10 102089432 102089576 -38227189 + MIR SINE MIR 19 178 -30 369 244 92 46 chr10 102089592 102089723 -38227042 + MIR SINE MIR 110 246 -16 183 355 28 28 chr10 102090456 102090563 -38226202 + MIR SINE MIR 59 165 -97 28 61 0 0 chr10 102091468 102091517 -38225248 + GC_rich Low_complexity Low_complexity 1 49 0 1843 154 27 0 chr10 102092541 102092833 -38223932 + AluJo SINE Alu 1 300 -12 2017 131 0 13 chr10 102092833 102093171 -38223594 + AluSq SINE Alu 1 313 0 311 271 153 42 chr10 102093283 102093427 -38223338 + MIR3 SINE MIR 18 177 -31 316 209 105 0 chr10 102093442 102093547 -38223218 - L1MC4 LINE L1 -1 8041 7926 2193 51 0 31 chr10 102093606 102093925 -38222840 + AluY SINE Alu 1 310 0 225 0 0 0 chr10 102094302 102094327 -38222438 + (A)n Simple_repeat Simple_repeat 1 25 0 2500 128 83 32 chr10 102094372 102094732 -38222033 + MSTA LTR MaLR 1 386 -42 1784 170 3 0 chr10 102094732 102095020 -38221745 - AluJb SINE Alu -23 289 1 2500 128 83 32 chr10 102095020 102095066 -38221699 + MSTA LTR MaLR 386 428 0 509 340 41 5 chr10 102095150 102095370 -38221395 + MIR SINE MIR 32 258 -4 1070 299 69 25 chr10 102095652 102096123 -38220642 - MLT1L LTR MaLR -6 609 12 785 271 180 22 chr10 102096413 102096750 -38220015 + L1ME3 LINE L1 5431 5858 -304 2036 112 20 0 chr10 102096750 102097045 -38219720 + AluSq SINE Alu 1 301 -12 785 271 180 22 chr10 102097045 102097157 -38219608 + L1ME3 LINE L1 5858 5951 -211 1551 183 24 10 chr10 102097817 102098106 -38218659 - AluJo SINE Alu -19 293 1 200 286 145 9 chr10 102098109 102098224 -38218541 - MIR SINE MIR -59 149 25 663 323 83 21 chr10 102098229 102098660 -38218105 + L2 LINE L2 2855 3312 -1 655 306 40 24 chr10 102099419 102099671 -38217094 + MIR SINE MIR 2 257 -5 531 323 26 5 chr10 102100966 102101161 -38215604 + MIR3 SINE MIR 1 199 -9 437 318 115 9 chr10 102101590 102101807 -38214958 - MIR SINE MIR -3 259 20 1030 251 66 62 chr10 102102709 102102954 -38213811 - L2 LINE L2 -49 3264 3022 1746 186 0 7 chr10 102102954 102103250 -38213515 + AluJb SINE Alu 1 294 -18 1030 251 66 62 chr10 102103250 102103641 -38213124 - L2 LINE L2 -291 3022 2623 333 0 0 0 chr10 102103641 102103678 -38213087 + (CACCAT)n Simple_repeat Simple_repeat 5 41 0 1030 251 66 62 chr10 102103678 102103691 -38213074 - L2 LINE L2 -690 2623 2612 318 329 77 7 chr10 102103708 102103851 -38212914 - MIR SINE MIR -32 230 78 288 331 15 56 chr10 102103857 102104123 -38212642 + L2 LINE L2 2804 3058 -214 383 247 53 34 chr10 102104485 102104645 -38212120 + MIR SINE MIR 17 180 -62 340 290 130 0 chr10 102105133 102105264 -38211501 - MIR3 SINE MIR -3 205 58 2031 138 3 0 chr10 102105320 102105631 -38211134 - AluSx SINE Alu 0 312 1 238 339 9 28 chr10 102106002 102106111 -38210654 - MER5B DNA MER1_type -69 109 3 230 266 51 38 chr10 102106676 102106755 -38210010 + MIR SINE MIR 23 102 -106 2084 118 0 32 chr10 102107010 102107324 -38209441 + AluSx SINE Alu 1 304 -8 1632 179 7 14 chr10 102107324 102107621 -38209144 + AluJb SINE Alu 1 295 -17 195 146 83 0 chr10 102107647 102107695 -38209070 + L2 LINE L2 3213 3264 -8 358 253 66 0 chr10 102107743 102107834 -38208931 - MIR3 SINE MIR -36 172 76 1209 114 0 6 chr10 102108809 102108984 -38207781 + AluSg/x SINE Alu 122 295 -17 387 0 0 0 chr10 102109024 102109067 -38207698 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 174 0 69 chr10 102109067 102109543 -38207222 + L1 LINE L1 4425 4867 -1279 253 326 167 46 chr10 102109622 102110036 -38206729 + L2 LINE L2 2809 3272 0 247 219 143 38 chr10 102110529 102110634 -38206131 + L2 LINE L2 3156 3271 -1 969 182 0 0 chr10 102110724 102110878 -38205887 - FRAM SINE Alu -12 154 1 429 319 0 0 chr10 102110976 102111089 -38205676 - MER81 DNA DNA 0 114 2 230 269 15 15 chr10 102111430 102111497 -38205268 - MIR3 SINE MIR -11 197 131 * 246 269 19 147 chr10 102111479 102111623 -38205142 - MER5A DNA MER1_type -5 184 61 701 191 7 7 chr10 102111623 102111759 -38205006 + MER5B DNA MER1_type 1 136 -42 1484 96 79 0 chr10 102111812 102112041 -38204724 - L1MA2 LINE L1 0 6304 6058 1630 139 4 4 chr10 102112054 102112313 -38204452 - AluJb SINE Alu -53 259 1 264 160 20 0 chr10 102112437 102112487 -38204278 + MER5B DNA MER1_type 4 54 -124 409 236 18 27 chr10 102112556 102112666 -38204099 + MER5B DNA MER1_type 69 177 -1 473 306 147 0 chr10 102112673 102112830 -38203935 + MER5A DNA MER1_type 4 183 -6 305 118 145 0 chr10 102112838 102112915 -38203850 - MIR3 SINE MIR -50 158 66 440 307 104 30 chr10 102113893 102113948 -38202817 - L2 LINE L2 -102 3211 3161 2906 130 11 23 chr10 102113948 102114387 -38202378 - Tigger2a DNA MER2_type 0 434 1 440 307 104 30 chr10 102114387 102114767 -38201998 - L2 LINE L2 -152 3161 2709 438 250 155 0 chr10 102114883 102114999 -38201766 + MIR SINE MIR 126 259 -3 536 207 7 43 chr10 102115310 102115450 -38201315 - MIR3 SINE MIR -63 145 11 382 325 219 6 chr10 102116134 102116303 -38200462 - MIR SINE MIR -12 250 46 294 324 42 5 chr10 102116354 102116518 -38200247 - MIR SINE MIR -56 206 38 691 265 53 11 chr10 102116696 102116917 -38199848 - MIR SINE MIR -14 248 17 348 179 90 0 chr10 102116969 102117047 -38199718 + L2 LINE L2 3188 3272 -41 285 151 0 0 chr10 102117278 102117331 -38199434 + (CAG)n Simple_repeat Simple_repeat 3 55 0 416 296 0 8 chr10 102118166 102118291 -38198474 + (TG)n Simple_repeat Simple_repeat 1 124 0 273 309 0 0 chr10 102118337 102118510 -38198255 + (TG)n Simple_repeat Simple_repeat 1 173 0 254 139 0 0 chr10 102119763 102119799 -38196966 + U2 snRNA snRNA 1 36 -152 241 135 0 0 chr10 102119850 102119887 -38196878 - L2 LINE L2 -19 3294 3258 * 474 242 186 25 chr10 102119886 102120047 -38196718 - MIR3 SINE MIR -6 202 16 808 227 116 0 chr10 102120518 102120725 -38196040 - MIR SINE MIR 0 262 32 239 229 115 0 chr10 102121665 102121726 -38195039 + MIR SINE MIR 109 176 -86 759 229 18 0 chr10 102121740 102121906 -38194859 - MER5B DNA MER1_type -9 169 1 1119 242 25 7 chr10 102121991 102122268 -38194497 + L1ME3A LINE L1 5880 6161 -9 207 0 0 0 chr10 102122391 102122414 -38194351 + (TG)n Simple_repeat Simple_repeat 1 23 0 466 261 179 0 chr10 102123197 102123404 -38193361 - MIR SINE MIR -14 248 5 183 42 0 0 chr10 102124272 102124296 -38192469 + (GCTG)n Simple_repeat Simple_repeat 4 27 0 487 283 98 22 chr10 102124689 102124873 -38191892 - MIR SINE MIR -35 227 30 413 284 17 0 chr10 102125821 102125937 -38190828 + MIR3 SINE MIR 90 207 -1 359 195 297 0 chr10 102126298 102126416 -38190349 - MIR SINE MIR 0 262 110 579 288 54 60 chr10 102126418 102126734 -38190031 + L2 LINE L2 2998 3311 -2 544 310 103 13 chr10 102126774 102127006 -38189759 + MIR SINE MIR 4 256 -6 560 317 121 0 chr10 102127833 102128057 -38188708 + MIR SINE MIR 12 262 0 330 226 184 54 chr10 102128129 102128297 -38188468 + MER102a DNA MER1_type 126 315 -15 216 0 0 0 chr10 102128602 102128626 -38188139 + (T)n Simple_repeat Simple_repeat 1 24 0 251 355 0 73 chr10 102128701 102128825 -38187940 + L2 LINE L2 3195 3309 -4 356 331 0 40 chr10 102128930 102129054 -38187711 + L2 LINE L2 3179 3297 -16 333 261 0 0 chr10 102129056 102129125 -38187640 + L2 LINE L2 3229 3297 -16 257 239 14 42 chr10 102129127 102129198 -38187567 + L2 LINE L2 3229 3297 -16 336 281 0 42 chr10 102129212 102129308 -38187457 + L2 LINE L2 3222 3313 0 302 260 29 29 chr10 102130398 102130502 -38186263 - MIR3 SINE MIR -16 192 89 193 289 26 13 chr10 102132092 102132168 -38184597 + MIR SINE MIR 53 129 -79 1464 273 104 60 chr10 102132173 102133266 -38183499 + L2 LINE L2 2073 3271 -1 407 304 71 57 chr10 102133395 102133731 -38183034 + L2 LINE L2 2868 3208 -64 296 267 30 53 chr10 102135492 102135623 -38181142 + MIR SINE MIR 18 145 -63 282 238 159 87 chr10 102136080 102136173 -38180592 - L2 LINE L2 0 3313 3207 1207 193 5 19 chr10 102136173 102136385 -38180380 + MER3 DNA MER1_type 1 209 0 282 238 159 87 chr10 102136385 102136417 -38180348 - L2 LINE L2 -106 3207 3179 240 250 22 45 chr10 102136521 102136610 -38180155 + MIR SINE MIR 20 105 -112 518 271 217 4 chr10 102136617 102136857 -38179908 - L2 LINE L2 -18 3295 3005 807 188 0 0 chr10 102136872 102137005 -38179760 + FLAM_A SINE Alu 1 133 0 2140 138 0 0 chr10 102138287 102138599 -38178166 - AluSx SINE Alu 0 312 1 2178 98 3 10 chr10 102138882 102139189 -38177576 - AluSp SINE Alu 0 313 9 271 207 146 0 chr10 102139305 102139387 -38177378 + MIR SINE MIR 60 153 -55 379 348 37 19 chr10 102139548 102139709 -38177056 - MIR SINE MIR -19 243 80 371 364 127 21 chr10 102139779 102140158 -38176607 - L2 LINE L2 -27 3245 2827 277 258 163 20 chr10 102140169 102140321 -38176444 - MIR3 SINE MIR -62 146 4 236 196 0 20 chr10 102140760 102140811 -38175954 + G-rich Low_complexity Low_complexity 1 50 0 344 253 52 60 chr10 102141595 102141744 -38175021 + L1ME4a LINE L1 5722 5867 -312 240 59 0 0 chr10 102141744 102141778 -38174987 + (CA)n Simple_repeat Simple_repeat 2 35 0 1683 161 33 0 chr10 102141785 102142059 -38174706 - AluJo SINE Alu -29 283 1 2364 90 3 0 chr10 102142305 102142617 -38174148 - AluSp SINE Alu 0 313 1 219 265 0 0 chr10 102142747 102142796 -38173969 + L2 LINE L2 3224 3272 0 362 226 129 0 chr10 102142857 102142950 -38173815 + L1ME4a LINE L1 6017 6121 0 239 329 65 24 chr10 102142983 102143153 -38173612 + L2 LINE L2 2917 3093 -179 718 292 43 25 chr10 102144114 102144369 -38172396 + MIR SINE MIR 1 259 -3 723 272 26 0 chr10 102144652 102144843 -38171922 + MIR SINE MIR 46 241 -21 250 261 52 22 chr10 102144850 102144984 -38171781 - L1ME4a LINE L1 -93 6028 5891 2524 209 83 62 chr10 102145205 102145991 -38170774 - L1MD1 LINE L1 -2 6240 5439 394 225 40 66 chr10 102145993 102146047 -38170718 - MER106A DNA MER1_type -89 147 93 1874 139 0 17 chr10 102146047 102146348 -38170417 - AluJb SINE Alu -16 296 1 394 225 40 66 chr10 102146348 102146359 -38170406 - MER106A DNA MER1_type -143 93 83 528 16 0 0 chr10 102146359 102146420 -38170345 + (TA)n Simple_repeat Simple_repeat 2 62 0 394 225 40 66 chr10 102146420 102146504 -38170261 - MER106A DNA MER1_type -153 83 1 265 281 11 22 chr10 102147119 102147242 -38169523 + GA-rich Low_complexity Low_complexity 1 121 0 460 251 75 26 chr10 102147981 102148174 -38168591 - MIR SINE MIR -48 214 18 340 370 43 16 chr10 102149071 102149255 -38167510 + L2 LINE L2 3117 3305 -8 298 321 170 28 chr10 102149830 102150470 -38166295 - L2 LINE L2 -5 3267 2525 743 223 21 42 chr10 102151619 102151812 -38164953 - MER5A DNA MER1_type 0 189 1 303 196 103 10 chr10 102151997 102152094 -38164671 - MER103 DNA DNA -18 148 43 298 282 145 10 chr10 102153798 102153954 -38162811 - MIR3 SINE MIR -57 151 3 585 222 137 7 chr10 102153962 102154147 -38162618 + MIR SINE MIR 12 219 -43 225 241 35 0 chr10 102154915 102154973 -38161792 + MIR SINE MIR 190 249 -13 955 216 24 24 chr10 102155044 102155257 -38161508 - MER20 DNA MER1_type 0 219 7 1437 135 9 5 chr10 102156334 102156582 -38160183 - AluSg/x SINE Alu 0 312 72 589 326 44 28 chr10 102157094 102157638 -38159127 + L2 LINE L2 2702 3310 -3 313 276 67 8 chr10 102159211 102159345 -38157420 - L2 LINE L2 -250 3063 2922 193 306 14 28 chr10 102159515 102159587 -38157178 + L2 LINE L2 3243 3313 0 326 331 58 0 chr10 102160584 102160723 -38156042 + L1MC4a LINE L1 5732 5878 -1930 547 227 38 0 chr10 102161258 102161390 -38155375 + MIR3 SINE MIR 13 149 -59 926 156 33 0 chr10 102161428 102161608 -38155157 + L1M2 LINE L1 5431 5616 -675 393 286 214 7 chr10 102161789 102161943 -38154822 + MER5A DNA MER1_type 4 189 0 507 259 106 25 chr10 102163429 102163647 -38153118 + MIR SINE MIR 3 234 -28 277 197 70 28 chr10 102164226 102164297 -38152468 + MIR3 SINE MIR 110 183 -25 198 0 0 0 chr10 102164560 102164582 -38152183 + (GA)n Simple_repeat Simple_repeat 2 23 0 264 345 175 15 chr10 102165837 102166037 -38150728 - MIR SINE MIR -19 243 12 417 206 37 9 chr10 102166727 102166834 -38149931 + MIR SINE MIR 42 151 -57 194 298 64 11 chr10 102167820 102167914 -38148851 - MIR SINE MIR -43 219 121 308 330 50 0 chr10 102169216 102169316 -38147449 - MER91C DNA MER1_type 0 140 36 193 184 0 0 chr10 102169445 102169483 -38147282 + L2 LINE L2 3274 3311 -2 266 294 135 24 chr10 102169955 102170081 -38146684 - L2 LINE L2 -4 3309 3170 2013 111 19 32 chr10 102170223 102170538 -38146227 - AluSx SINE Alu -1 311 1 191 182 73 55 chr10 102170738 102170793 -38145972 - L2 LINE L2 -186 3086 3031 437 273 152 24 chr10 102171036 102171201 -38145564 + MER5A DNA MER1_type 4 189 0 1255 155 112 40 chr10 102171216 102171493 -38145272 - AluJo SINE Alu -15 297 1 1159 134 5 65 chr10 102171887 102172088 -38144677 - MER5A DNA MER1_type 0 189 1 395 331 11 17 chr10 102172102 102172277 -38144488 + MIR SINE MIR 46 219 -43 750 156 84 67 chr10 102172514 102172693 -38144072 - MER5A DNA MER1_type -7 182 1 589 355 14 0 chr10 102172849 102173069 -38143696 + MIR SINE MIR 40 262 0 338 146 0 0 chr10 102174298 102174353 -38142412 + L2 LINE L2 3218 3272 0 284 371 30 0 chr10 102174336 102174468 -38142297 + MIR3 SINE MIR 2 137 -71 * 360 326 45 8 chr10 102176021 102176153 -38140612 + MIR SINE MIR 87 223 -39 339 286 16 28 chr10 102176277 102176427 -38140338 + (TGAG)n Simple_repeat Simple_repeat 1 150 -30 1880 134 3 17 chr10 102176427 102176725 -38140040 + AluJo SINE Alu 1 294 -18 339 286 16 28 chr10 102176725 102176756 -38140009 + (TGAG)n Simple_repeat Simple_repeat 150 180 0 312 263 29 29 chr10 102176773 102176944 -38139821 + (TGAG)n Simple_repeat Simple_repeat 2 172 0 412 195 52 35 chr10 102177237 102177411 -38139354 + (TGAG)n Simple_repeat Simple_repeat 2 178 0 316 333 153 0 chr10 102177893 102178043 -38138722 + MIR SINE MIR 20 192 -70 1430 190 11 83 chr10 102178083 102178446 -38138319 - MER46C DNA MER2_type 0 338 2 598 238 38 19 chr10 102178932 102179092 -38137673 - MER103 DNA DNA -3 163 1 497 279 118 10 chr10 102180075 102180279 -38136486 - MIR SINE MIR 0 262 37 574 191 108 6 chr10 102181249 102181406 -38135359 + MIR SINE MIR 77 249 -13 317 339 71 0 chr10 102181695 102181822 -38134943 - MIR SINE MIR -48 214 79 360 270 10 0 chr10 102182156 102182256 -38134509 - MER5A DNA MER1_type -80 109 9 1293 285 86 27 chr10 102182461 102183272 -38133493 + L1MC4a LINE L1 5084 5368 -778 184 250 36 18 chr10 102183277 102183333 -38133432 + L2 LINE L2 3257 3313 0 907 252 210 14 chr10 102183982 102184467 -38132298 - L2 LINE L2 -5 3308 2714 399 195 35 0 chr10 102184463 102184550 -38132215 - MIR SINE MIR -121 141 52 * 220 310 80 26 chr10 102185116 102185229 -38131536 - L2 LINE L2 -4 3268 3150 477 189 151 0 chr10 102185287 102185393 -38131372 + L2 LINE L2 3192 3313 0 667 247 48 0 chr10 102185454 102185620 -38131145 - MER5B DNA MER1_type -1 177 4 977 221 52 12 chr10 102186747 102186996 -38129769 + MIR SINE MIR 4 262 0 565 199 173 19 chr10 102187059 102187215 -38129550 + MER5A DNA MER1_type 4 183 -6 279 310 129 0 chr10 102187216 102187332 -38129433 + L2 LINE L2 3183 3313 0 195 222 32 0 chr10 102187442 102187505 -38129260 - L2 LINE L2 -700 2614 2550 401 205 9 137 chr10 102188361 102188575 -38128190 - MIR SINE MIR -50 212 30 1198 252 46 50 chr10 102188774 102189251 -38127514 + L2 LINE L2 2838 3312 -1 284 268 177 19 chr10 102190022 102190227 -38126538 - MIR3 SINE MIR -33 229 1 247 278 42 0 chr10 102190410 102190482 -38126283 + MIR3 SINE MIR 86 160 -48 323 337 11 81 chr10 102191443 102191704 -38125061 + L2 LINE L2 3030 3272 0 560 285 18 0 chr10 102191754 102191919 -38124846 - MIR SINE MIR -20 242 75 180 346 69 8 chr10 102192295 102192425 -38124340 + MIR SINE MIR 46 183 -79 714 272 164 45 chr10 102192656 102193608 -38123157 + L2 LINE L2 1802 2866 -448 438 282 84 0 chr10 102193806 102193948 -38122817 + L2 LINE L2 3159 3312 -1 211 298 0 0 chr10 102194242 102194299 -38122466 - MIR SINE MIR -19 243 187 1935 141 3 23 chr10 102194425 102194724 -38122041 + AluJb SINE Alu 1 293 -19 185 265 132 0 chr10 102195208 102195276 -38121489 - MIR SINE MIR -61 147 71 1050 213 37 0 chr10 102195317 102195533 -38121232 + MER58A DNA MER1_type 1 224 0 2147 113 0 13 chr10 102195786 102196086 -38120679 + AluSq SINE Alu 1 296 -17 1413 246 89 72 chr10 102196195 102196698 -38120067 + MLT1H1 LTR MaLR 1 518 -37 243 216 102 23 chr10 102197632 102197720 -38119045 + L2 LINE L2 3168 3262 -10 244 280 84 49 chr10 102197952 102198177 -38118588 - MLT1K LTR MaLR -144 444 212 359 239 0 0 chr10 102199212 102199283 -38117482 - LTR47B LTR ERVL -1 442 372 314 200 0 14 chr10 102199383 102199453 -38117312 - LTR47B LTR ERVL -71 372 304 759 194 8 0 chr10 102199513 102199642 -38117123 + FLAM_C SINE Alu 1 130 -3 275 310 42 7 chr10 102199948 102200090 -38116675 - L2 LINE L2 -1293 2021 1875 180 0 0 0 chr10 102200094 102200114 -38116651 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 2483 101 41 14 chr10 102200451 102200816 -38115949 - THE1C LTR MaLR 0 375 1 651 289 18 31 chr10 102201434 102201662 -38115103 + MIR SINE MIR 37 261 -1 265 137 20 0 chr10 102201687 102201738 -38115027 + L2 LINE L2 3262 3313 0 264 162 135 27 chr10 102201855 102201940 -38114825 + MIR SINE MIR 111 206 -56 396 0 0 0 chr10 102201986 102202030 -38114735 + (GA)n Simple_repeat Simple_repeat 2 45 0 353 309 158 7 chr10 102203567 102203719 -38113046 + MER5A DNA MER1_type 9 183 -6 2364 78 0 0 chr10 102203812 102204129 -38112636 + AluY SINE Alu 3 319 0 1132 153 0 0 chr10 102204135 102204305 -38112460 + AluSq SINE Alu 141 310 -3 358 282 34 8 chr10 102204306 102204423 -38112342 + MER5A DNA MER1_type 67 186 -3 318 275 81 4 chr10 102205368 102205536 -38111229 - MIR SINE MIR -59 149 10 893 195 109 21 chr10 102206409 102206743 -38110022 - MLT1C LTR MaLR -1 466 1 187 317 77 10 chr10 102206808 102206912 -38109853 - MIR SINE MIR -35 227 117 324 240 25 41 chr10 102207200 102207321 -38109444 + MIR SINE MIR 16 134 -128 416 224 175 9 chr10 102207967 102208166 -38108599 - MIR SINE MIR -16 246 22 1496 186 3 66 chr10 102208537 102208854 -38107911 - AluJb SINE Alu -15 297 1 725 259 65 30 chr10 102209138 102209370 -38107395 - MIR SINE MIR -6 256 17 555 215 0 0 chr10 102209778 102209871 -38106894 + LTR32 LTR ERVL 379 471 0 635 164 214 6 chr10 102210234 102210393 -38106372 - L1MC1 LINE L1 -49 6284 6093 721 191 105 0 chr10 102210902 102211064 -38105701 - MER68 LTR ERV1 -7 555 377 2319 131 19 150 chr10 102211067 102211593 -38105172 + LTR32 LTR ERVL 15 471 0 2231 141 23 3 chr10 102211593 102211941 -38104824 - MER68 LTR ERV1 -184 378 24 373 265 121 15 chr10 102212277 102212409 -38104356 - L3 LINE CR1 -819 758 613 184 323 31 0 chr10 102212504 102212569 -38104196 - L3 LINE CR1 -1113 464 398 24 0 0 0 chr10 102212812 102212836 -38103929 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr10 102213182 102213216 -38103549 + AT_rich Low_complexity Low_complexity 1 34 0 427 218 0 23 chr10 102213492 102213579 -38103186 + AluJ/FLAM SINE Alu 3 87 -225 196 53 53 0 chr10 102214618 102214656 -38102109 + A-rich Low_complexity Low_complexity 2 41 0 1104 165 5 11 chr10 102215008 102215196 -38101569 + MER5A DNA MER1_type 3 189 0 284 246 31 0 chr10 102215269 102215334 -38101431 + L2 LINE L2 3206 3272 0 548 249 58 62 chr10 102215459 102215700 -38101065 - MIR SINE MIR -5 257 18 227 206 0 96 chr10 102215960 102216033 -38100732 + MER5A DNA MER1_type 2 67 -122 343 338 7 7 chr10 102216720 102216874 -38099891 + L3 LINE CR1 607 760 -817 462 211 49 21 chr10 102216967 102217109 -38099656 - MIR SINE MIR -1 261 116 997 205 44 18 chr10 102217247 102217520 -38099245 - HAL1 LINE L1 -900 1607 1328 796 271 131 20 chr10 102217692 102218042 -38098723 - HAL1 LINE L1 -2110 397 9 425 291 63 31 chr10 102218277 102218500 -38098265 - L1ME4a LINE L1 -14 6107 5878 192 175 0 88 chr10 102218565 102218622 -38098143 - MIR SINE MIR 0 262 211 2395 180 147 67 chr10 102218647 102219044 -38097721 - L1MC4 LINE L1 -2 8040 7676 2025 128 10 10 chr10 102219044 102219341 -38097424 - AluJo SINE Alu -15 297 1 2395 180 147 67 chr10 102219341 102219562 -38097203 - L1MC4 LINE L1 -366 7676 7474 303 110 82 14 chr10 102219562 102219635 -38097130 - L1MB3 LINE L1 -2 6181 6104 2395 180 147 67 chr10 102219635 102220167 -38096598 - L1MC4 LINE L1 -568 7474 6692 906 137 208 48 chr10 102220316 102220592 -38096173 + MER33 DNA MER1_type 1 324 0 1397 250 151 28 chr10 102220596 102222176 -38094589 - L1MC4a LINE L1 -743 5403 4401 679 255 108 36 chr10 102222169 102222612 -38094153 - L1ME4a LINE L1 -266 5855 5381 * 387 56 0 0 chr10 102222721 102222775 -38093990 + (TG)n Simple_repeat Simple_repeat 2 55 0 1916 166 0 0 chr10 102222775 102223059 -38093706 - AluJb SINE Alu -28 284 1 21 57 0 0 chr10 102223316 102223351 -38093414 + AT_rich Low_complexity Low_complexity 1 35 0 1887 147 0 16 chr10 102225041 102225347 -38091418 + AluSx SINE Alu 3 303 -9 816 157 29 0 chr10 102225802 102225942 -38090823 + MLT1A1 LTR MaLR 7 150 -215 213 238 0 0 chr10 102226753 102226795 -38089970 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 626 207 16 16 chr10 102227057 102227178 -38089587 + MLT1J LTR MaLR 76 196 -315 2438 147 12 56 chr10 102227179 102227607 -38089158 + Tigger4(Zombi) DNA MER2_type 25 433 -2298 355 161 74 12 chr10 102227613 102227694 -38089071 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 432 231 94 26 chr10 102227697 102227814 -38088951 + MLT1J LTR MaLR 187 311 -200 1163 115 12 0 chr10 102227925 102228090 -38088675 - MER49 LTR ERV1 -606 317 151 7076 58 16 26 chr10 102228096 102229817 -38086948 - SVA Other Other -647 1386 1 656 201 187 14 chr10 102230252 102230461 -38086304 - MIR SINE MIR -3 259 15 6852 143 20 37 chr10 102230500 102231726 -38085039 + L1M3f LINE L1 5 1209 -4119 1114 244 15 11 chr10 102231722 102231993 -38084772 + L1M3f LINE L1 2643 2914 -3414 * 184 262 16 33 chr10 102232202 102232263 -38084502 - L3 LINE CR1 -115 1462 1403 353 312 41 61 chr10 102232382 102232677 -38084088 + L3 LINE CR1 951 1239 -338 1729 132 6 95 chr10 102232811 102233137 -38083628 - AluSx SINE Alu -15 297 1 7608 138 27 6 chr10 102233145 102234397 -38082368 - L1MC3 LINE L1 -1 7784 6507 200 308 154 10 chr10 102234403 102234507 -38082258 + L3 LINE CR1 1346 1464 -113 2149 107 20 10 chr10 102234967 102235266 -38081499 - AluSg SINE Alu -8 302 1 275 282 43 43 chr10 102235574 102235691 -38081074 + MER5A DNA MER1_type 50 166 -23 * 357 290 28 28 chr10 102235586 102235693 -38081072 - MER5A DNA MER1_type -50 139 33 249 222 244 0 chr10 102235741 102235831 -38080934 - MER94 DNA DNA -20 114 3 2354 224 107 22 chr10 102236524 102237545 -38079220 + L2 LINE L2 2116 3275 -38 583 283 109 43 chr10 102237593 102237961 -38078804 + L1MB3 LINE L1 5266 5657 -464 2601 144 5 2 chr10 102237992 102238415 -38078350 + L1MB3 LINE L1 5753 6176 -7 4027 143 108 14 chr10 102238572 102239297 -38077468 + MER54B LTR ERVL 1 793 0 598 270 46 4 chr10 102239333 102239570 -38077195 + L1ME4a LINE L1 5677 5923 -198 300 161 88 167 chr10 102239585 102239777 -38076988 + MER104 DNA Tc2 1 177 -3 266 176 0 27 chr10 102239839 102239913 -38076852 + L1ME4a LINE L1 6050 6121 0 181 309 30 83 chr10 102240047 102240215 -38076550 + L2 LINE L2 2902 3060 -212 228 318 73 45 chr10 102240273 102240493 -38076272 + L2 LINE L2 1846 2071 -1243 282 294 0 47 chr10 102241640 102241832 -38074933 + G-rich Low_complexity Low_complexity 1 183 0 274 284 20 20 chr10 102242368 102242470 -38074295 - MER91A DNA MER1_type -32 164 63 599 272 8 131 chr10 102243037 102243305 -38073460 + MIR SINE MIR 15 249 -13 454 204 134 16 chr10 102244871 102245035 -38071730 + MER5A DNA MER1_type 4 189 0 243 307 0 23 chr10 102245041 102245129 -38071636 + MIR SINE MIR 64 149 -113 190 325 0 13 chr10 102245239 102245316 -38071449 + L2 LINE L2 2881 2956 -358 483 340 112 0 chr10 102245373 102245658 -38071107 + L2 LINE L2 2967 3283 -30 342 254 318 0 chr10 102245955 102246081 -38070684 + MER5A DNA MER1_type 3 168 -21 703 208 22 49 chr10 102246388 102246571 -38070194 + MER5B DNA MER1_type 1 178 0 218 311 79 37 chr10 102246593 102246757 -38070008 + MER5B DNA MER1_type 8 178 0 611 283 94 0 chr10 102246778 102246969 -38069796 + MIR SINE MIR 48 256 -6 183 194 0 0 chr10 102247329 102247365 -38069400 - MIR3 SINE MIR -44 164 129 1606 267 85 26 chr10 102247925 102248655 -38068110 - L1ME4a LINE L1 -2 6119 5347 253 248 53 146 chr10 102249941 102250092 -38066673 - MIR3 SINE MIR -7 201 59 1253 301 40 30 chr10 102250966 102251467 -38065298 - MARNA DNA Mariner -11 575 70 364 278 21 28 chr10 102251472 102251616 -38065149 - LTR67 LTR ERVL -4 553 411 501 336 118 0 chr10 102253491 102253702 -38063063 + MIR SINE MIR 20 255 -7 564 212 95 22 chr10 102254382 102254519 -38062246 + L2 LINE L2 3165 3311 -2 2135 104 13 0 chr10 102255159 102255458 -38061307 + AluSx SINE Alu 1 303 -9 1986 164 113 43 chr10 102255544 102255990 -38060775 + MLT2B1 LTR ERVL 1 516 -38 1846 132 42 71 chr10 102256011 102256362 -38060403 - MER7A DNA MER2_type -1 345 5 534 292 0 43 chr10 102256415 102256576 -38060189 - MIR SINE MIR -84 178 25 205 230 11 81 chr10 102256610 102256697 -38060068 + CT-rich Low_complexity Low_complexity 5 85 0 395 250 83 19 chr10 102257394 102257502 -38059263 + L2 LINE L2 3158 3272 0 796 182 8 0 chr10 102257699 102257831 -38058934 + FLAM_C SINE Alu 1 133 0 1358 172 14 39 chr10 102257863 102258182 -38058583 + AluJo SINE Alu 21 312 0 432 210 80 0 chr10 102258307 102258407 -38058358 - MIR SINE MIR -7 255 148 4686 107 31 4 chr10 102259077 102259789 -38056976 + L1MA8 LINE L1 5561 6291 0 263 200 233 33 chr10 102260443 102260533 -38056232 - L2 LINE L2 -24 3289 3182 1967 137 0 0 chr10 102260582 102260874 -38055891 - AluSq SINE Alu -21 292 1 180 77 0 0 chr10 102262009 102262035 -38054730 + (CA)n Simple_repeat Simple_repeat 2 27 0 1647 125 24 98 chr10 102262594 102262736 -38054029 + AluYb8 SINE Alu 1 152 -166 7728 27 5 2 chr10 102262736 102263997 -38052768 + L1PA3 LINE L1 4929 6155 0 1647 125 24 98 chr10 102263997 102264191 -38052574 + AluYb8 SINE Alu 152 312 -6 1026 249 49 59 chr10 102264245 102264694 -38052071 + L1MEd LINE L1 801 1246 -4959 1589 180 3 14 chr10 102264694 102264988 -38051777 - AluJb SINE Alu -21 291 1 1026 249 49 59 chr10 102264988 102265067 -38051698 + L1MEd LINE L1 1246 1324 -4881 24 0 0 0 chr10 102265470 102265494 -38051271 + AT_rich Low_complexity Low_complexity 1 24 0 7554 184 88 49 chr10 102265739 102267423 -38049342 + MER52A LTR ERV1 1 1750 -5 606 290 94 31 chr10 102267440 102268046 -38048719 + L1MEd LINE L1 2131 2734 -3481 205 290 174 0 chr10 102268048 102268117 -38048648 + MIR SINE MIR 74 154 -108 530 267 35 29 chr10 102268127 102268299 -38048466 - MER104 DNA Tc2 -5 175 3 23 0 0 0 chr10 102269062 102269085 -38047680 + AT_rich Low_complexity Low_complexity 1 23 0 2421 51 6 16 chr10 102269482 102269796 -38046969 - AluY SINE Alu 0 311 1 2354 194 26 8 chr10 102269970 102270466 -38046299 - MLT1D LTR MaLR 0 505 1 225 146 0 0 chr10 102270483 102270531 -38046234 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 590 275 120 2 chr10 102271208 102271505 -38045260 + L1MC4a LINE L1 5566 5792 -329 26 0 0 0 chr10 102271515 102271541 -38045224 + AT_rich Low_complexity Low_complexity 1 26 0 195 42 0 0 chr10 102271791 102271815 -38044950 + (TA)n Simple_repeat Simple_repeat 2 25 0 2272 99 0 0 chr10 102271815 102272118 -38044647 - AluSq SINE Alu -10 303 1 220 180 8 33 chr10 102272295 102272417 -38044348 + (TA)n Simple_repeat Simple_repeat 2 120 0 286 331 150 55 chr10 102273772 102274026 -38042739 + L3b LINE CR1 1277 1554 -29 827 186 137 6 chr10 102275895 102276078 -38040687 - MER3 DNA MER1_type 0 209 3 299 328 40 51 chr10 102276198 102276375 -38040390 - MIR SINE MIR -76 186 12 551 316 23 23 chr10 102276532 102276747 -38040018 + MIR SINE MIR 31 245 -17 2303 84 0 0 chr10 102276755 102277053 -38039712 - AluSx SINE Alu -14 298 1 200 328 69 15 chr10 102277147 102277278 -38039487 - MIR SINE MIR -105 157 20 256 171 90 108 chr10 102277684 102277795 -38038970 + MLT1F1 LTR MaLR 424 550 -17 548 230 52 118 chr10 102278210 102278497 -38038268 + L2 LINE L2 3045 3312 -1 183 129 0 0 chr10 102278498 102278529 -38038236 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 241 295 0 24 chr10 102279858 102279981 -38036784 + MER117 DNA MER1_type 4 177 -20 432 200 92 25 chr10 102280263 102280383 -38036382 + MIR3 SINE MIR 71 198 -10 667 225 169 6 chr10 102280896 102281056 -38035709 + MER5A DNA MER1_type 4 189 0 312 98 0 0 chr10 102281056 102281097 -38035668 - MER5B DNA MER1_type -8 170 130 5284 137 29 50 chr10 102281097 102282250 -38034515 + L1MB3 LINE L1 5055 6182 -1 285 246 26 15 chr10 102282250 102282403 -38034362 - MER5B DNA MER1_type -54 124 10 618 251 141 0 chr10 102282420 102282583 -38034182 - MER5A DNA MER1_type 0 189 4 351 243 0 0 chr10 102282974 102283044 -38033721 + L2 LINE L2 3197 3266 -6 349 273 187 7 chr10 102283138 102283277 -38033488 - MER5A DNA MER1_type -1 188 25 491 253 22 55 chr10 102283277 102283459 -38033306 - MER5B DNA MER1_type -2 176 1 193 298 60 60 chr10 102283915 102283999 -38032766 - L2 LINE L2 -50 3222 3139 1548 174 3 14 chr10 102284247 102284540 -38032225 - AluJo SINE Alu -13 299 10 2067 88 13 31 chr10 102284627 102284944 -38031821 + AluSx SINE Alu 1 311 -1 266 315 47 22 chr10 102284952 102285114 -38031651 + MIR SINE MIR 19 181 -72 185 263 0 0 chr10 102285672 102285710 -38031055 - L2 LINE L2 -42 3271 3234 1142 131 56 37 chr10 102286055 102286269 -38030496 + MER20 DNA MER1_type 1 218 -1 1042 243 49 0 chr10 102287008 102287251 -38029514 - MIR SINE MIR 0 262 8 280 363 15 15 chr10 102287558 102287693 -38029072 - L2 LINE L2 -578 2736 2602 312 27 0 0 chr10 102287713 102287750 -38029015 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 357 269 37 46 chr10 102287751 102287859 -38028906 - L2 LINE L2 -18 3295 3189 394 216 90 18 chr10 102288239 102288350 -38028415 + MIR SINE MIR 119 237 -25 218 246 66 33 chr10 102288678 102288739 -38028026 - L2 LINE L2 -71 3201 3139 2255 103 3 0 chr10 102288782 102289094 -38027671 + AluSp SINE Alu 1 313 0 188 259 0 56 chr10 102289599 102289653 -38027112 + MIR3 SINE MIR 146 196 -12 240 378 54 0 chr10 102290107 102290218 -38026547 - L2 LINE L2 0 3313 3197 252 0 0 0 chr10 102291455 102291483 -38025282 + (T)n Simple_repeat Simple_repeat 1 28 0 243 0 0 0 chr10 102291504 102291531 -38025234 + (CA)n Simple_repeat Simple_repeat 1 27 0 243 337 56 11 chr10 102291538 102291627 -38025138 - MIR SINE MIR -86 122 30 618 303 51 5 chr10 102291712 102291907 -38024858 + MIR3 SINE MIR 1 204 -4 1085 179 10 10 chr10 102291925 102292126 -38024639 - MER20 DNA MER1_type -2 217 17 352 292 71 18 chr10 102292889 102293002 -38023763 - MIR3 SINE MIR -45 163 45 2510 34 41 0 chr10 102293607 102293899 -38022866 + AluY SINE Alu 1 304 -7 462 211 66 155 chr10 102294565 102294778 -38021987 + MIR3 SINE MIR 12 205 -3 480 77 0 0 chr10 102296192 102296257 -38020508 + (CGG)n Simple_repeat Simple_repeat 3 67 0 201 129 0 0 chr10 102297238 102297269 -38019496 + (CCG)n Simple_repeat Simple_repeat 2 32 0 28 29 0 0 chr10 102297412 102297447 -38019318 + GC_rich Low_complexity Low_complexity 1 35 0 225 195 23 46 chr10 102297523 102297610 -38019155 + (CGG)n Simple_repeat Simple_repeat 3 87 0 354 94 75 0 chr10 102298447 102298500 -38018265 + L2 LINE L2 3212 3268 -4 432 67 0 0 chr10 102298927 102298987 -38017778 + (CA)n Simple_repeat Simple_repeat 2 61 0 1588 171 61 71 chr10 102300102 102300495 -38016270 + MLT1B LTR MaLR 2 390 0 256 351 65 30 chr10 102300729 102300897 -38015868 + L2 LINE L2 3132 3305 -8 1005 219 141 24 chr10 102301303 102301600 -38015165 - MER46C DNA MER2_type 0 338 7 244 266 14 70 chr10 102303046 102303189 -38013576 + GA-rich Low_complexity Low_complexity 4 138 0 299 328 8 25 chr10 102303315 102303434 -38013331 + GA-rich Low_complexity Low_complexity 6 122 0 456 236 57 24 chr10 102303746 102303869 -38012896 + MIR SINE MIR 135 261 -1 373 224 182 42 chr10 102304096 102304194 -38012571 - MIR SINE MIR -77 185 102 2016 124 3 3 chr10 102304194 102304500 -38012265 + AluSx SINE Alu 1 306 0 373 224 182 42 chr10 102304500 102304556 -38012209 - MIR SINE MIR -160 102 16 284 325 33 33 chr10 102304926 102305077 -38011688 + L3b LINE CR1 1312 1462 -121 258 86 0 0 chr10 102305529 102305564 -38011201 + U2 snRNA snRNA 1 35 -153 2333 118 0 3 chr10 102305785 102306098 -38010667 + AluSx SINE Alu 1 312 0 296 154 58 0 chr10 102306354 102306406 -38010359 - L2 LINE L2 0 3272 3218 358 305 130 19 chr10 102306927 102307081 -38009684 - L2 LINE L2 -11 3261 3091 184 221 191 44 chr10 102307145 102307213 -38009552 + MIR3 SINE MIR 4 81 -127 1459 148 63 4 chr10 102307213 102307295 -38009470 + AluJo SINE Alu 37 113 -199 351 0 0 0 chr10 102307295 102307334 -38009431 + (CA)n Simple_repeat Simple_repeat 2 40 0 1459 148 63 4 chr10 102307334 102307488 -38009277 + AluJo SINE Alu 113 287 -25 180 125 0 0 chr10 102307499 102307531 -38009234 + (GA)n Simple_repeat Simple_repeat 1 32 0 409 257 206 11 chr10 102307855 102308030 -38008735 - MIR SINE MIR -45 217 9 214 360 61 18 chr10 102308076 102308190 -38008575 - MIR SINE MIR -74 134 16 719 252 20 61 chr10 102308448 102308624 -38008141 - MIR SINE MIR -14 248 83 2211 138 3 0 chr10 102308624 102308935 -38007830 - AluSx SINE Alu 0 312 1 719 252 20 61 chr10 102308935 102309004 -38007761 - MIR SINE MIR -179 83 13 731 245 115 92 chr10 102309011 102309488 -38007277 + L2 LINE L2 2824 3311 -2 221 354 62 0 chr10 102310310 102310406 -38006359 + MIR3 SINE MIR 93 194 -14 336 312 156 0 chr10 102310455 102310609 -38006156 - MIR SINE MIR -8 254 77 419 242 8 0 chr10 102310970 102311090 -38005675 + (CAA)n Simple_repeat Simple_repeat 2 122 0 981 176 4 0 chr10 102311100 102311353 -38005412 + (CAG)n Simple_repeat Simple_repeat 1 254 0 432 0 0 0 chr10 102312070 102312118 -38004647 + (GA)n Simple_repeat Simple_repeat 1 48 0 210 381 101 7 chr10 102312768 102312907 -38003858 - L2 LINE L2 -25 3288 3137 324 349 114 0 chr10 102313053 102313219 -38003546 - MIR3 SINE MIR 0 208 24 2181 191 113 22 chr10 102313997 102314494 -38002271 + MLT1F LTR MaLR 1 542 0 350 348 143 0 chr10 102314579 102314740 -38002025 - MIR3 SINE MIR -10 198 15 1787 150 0 28 chr10 102314780 102315067 -38001698 - AluJb SINE Alu -18 294 16 332 213 0 0 chr10 102315087 102315148 -38001617 - L2 LINE L2 -5 3308 3248 339 265 169 15 chr10 102315564 102315700 -38001065 - MIR3 SINE MIR -32 176 20 773 281 67 4 chr10 102316134 102316372 -38000393 + MIR SINE MIR 7 259 -3 519 250 6 58 chr10 102316502 102316674 -38000091 - L1ME1 LINE L1 -21 6145 5983 22 0 0 0 chr10 102316780 102316802 -37999963 + AT_rich Low_complexity Low_complexity 1 22 0 343 261 15 8 chr10 102316867 102317001 -37999764 + L1MC4 LINE L1 7908 8042 0 320 292 0 21 chr10 102317069 102317165 -37999600 + MER5B DNA MER1_type 27 120 -58 483 270 0 0 chr10 102317506 102317606 -37999159 - MER81 DNA DNA -14 100 1 1426 187 61 64 chr10 102317653 102318028 -37998737 - MLT1A2 LTR MaLR 0 374 1 202 174 133 71 chr10 102319110 102319208 -37997557 + MIR3 SINE MIR 9 112 -96 * 595 244 68 43 chr10 102319207 102319439 -37997326 + MIR SINE MIR 5 252 -10 695 298 11 11 chr10 102319507 102319698 -37997067 - MIR SINE MIR -13 249 59 1358 189 22 22 chr10 102319726 102320043 -37996722 + MER33 DNA MER1_type 1 317 -7 414 250 83 0 chr10 102320539 102320635 -37996130 - L3 LINE CR1 -113 1464 1361 212 322 0 17 chr10 102320735 102320794 -37995971 + MER5A DNA MER1_type 82 139 -50 210 128 0 0 chr10 102320794 102320833 -37995932 + (TC)n Simple_repeat Simple_repeat 2 40 0 216 0 0 0 chr10 102320833 102320857 -37995908 + (CA)n Simple_repeat Simple_repeat 1 24 0 517 294 61 0 chr10 102321171 102321334 -37995431 - MIR SINE MIR -16 246 74 2782 284 23 33 chr10 102322114 102323017 -37993748 - L3 LINE CR1 -283 1294 401 210 338 38 0 chr10 102323445 102323525 -37993240 + L2 LINE L2 3187 3269 -3 687 276 43 5 chr10 102324312 102324497 -37992268 + MIR SINE MIR 23 214 -48 361 209 11 44 chr10 102324519 102324610 -37992155 + MIR SINE MIR 69 156 -106 649 283 80 40 chr10 102325875 102326126 -37990639 - MIR SINE MIR 0 262 2 254 213 38 50 chr10 102326256 102326336 -37990429 + MIR SINE MIR 114 192 -70 2229 109 7 0 chr10 102326553 102326846 -37989919 + AluSg SINE Alu 1 295 -15 506 220 51 3 chr10 102327643 102327760 -37989005 - MIR SINE MIR -63 145 44 451 277 43 21 chr10 102327729 102327910 -37988855 + MIR SINE MIR 8 192 -62 * 766 173 30 8 chr10 102328327 102328460 -37988305 - L2 LINE L2 0 3313 3178 212 260 20 0 chr10 102328837 102328887 -37987878 + L2 LINE L2 3259 3309 -4 437 92 79 0 chr10 102329169 102329245 -37987520 + L1M2 LINE L1 5476 5557 -743 1031 82 16 33 chr10 102330205 102330276 -37986489 + (TTTC)n Simple_repeat Simple_repeat 1 249 0 1031 82 16 33 chr10 102330276 102330459 -37986306 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1170 292 36 27 chr10 102330590 102331038 -37985727 - LTR16B LTR ERVL -12 452 1 416 260 0 10 chr10 102331214 102331314 -37985451 + AluSq/x SINE Alu 9 107 -206 7179 149 45 9 chr10 102331875 102334424 -37982341 - L1PBa LINE L1 -2502 4360 1715 964 258 15 11 chr10 102335651 102335911 -37980854 + MIR SINE MIR 2 262 0 270 329 29 64 chr10 102336383 102336566 -37980199 + MIR3 SINE MIR 1 176 -68 694 289 83 6 chr10 102336572 102336752 -37980013 + MER91A DNA MER1_type 3 196 0 300 291 25 0 chr10 102336807 102336886 -37979879 - L2 LINE L2 -5 3308 3228 816 287 142 28 chr10 102336896 102337455 -37979310 + L2 LINE L2 2462 3122 -191 2032 143 156 5 chr10 102337455 102337827 -37978938 - MSTA LTR MaLR 0 428 1 816 287 142 28 chr10 102337827 102338039 -37978726 + L2 LINE L2 3122 3308 -5 272 193 89 156 chr10 102338111 102338246 -37978519 + MER63 DNA MER1_type 1 752 -84 287 190 0 17 chr10 102338251 102338309 -37978456 + MER63 DNA MER1_type 985 1041 -20 766 172 0 28 chr10 102338309 102338454 -37978311 + FLAM_C SINE Alu 2 142 -1 242 237 34 136 chr10 102338508 102338626 -37978139 - L2 LINE L2 -169 3103 2998 180 311 58 58 chr10 102338834 102338937 -37977828 - L2 LINE L2 -271 3001 2899 472 211 73 108 chr10 102339067 102339271 -37977494 + L2 LINE L2 3117 3313 0 1523 187 52 24 chr10 102339282 102339571 -37977194 - AluJo SINE Alu -7 305 9 1099 134 175 52 chr10 102339680 102339948 -37976817 - LTR8A LTR ERV1 -2 725 425 3390 50 71 44 chr10 102340005 102340482 -37976283 + LTR2B LTR ERV1 1 490 0 2120 111 0 48 chr10 102340592 102340908 -37975857 - AluSx SINE Alu -11 301 1 206 241 98 45 chr10 102340909 102341021 -37975744 - L2 LINE L2 -951 2363 2246 283 300 267 6 chr10 102341047 102341379 -37975386 - L2 LINE L2 -1177 2137 1721 245 277 62 54 chr10 102342220 102342350 -37974415 + MIR SINE MIR 20 150 -112 761 146 15 23 chr10 102342957 102343087 -37973678 - FLAM_C SINE Alu 0 133 5 1149 104 62 5 chr10 102343290 102343482 -37973283 - Tigger4(Zombi) DNA MER2_type 0 2731 2529 1778 148 0 4 chr10 102343494 102343772 -37972993 + AluSx SINE Alu 3 279 -33 1031 102 15 31 chr10 102343892 102344228 -37972537 + (TTTC)n Simple_repeat Simple_repeat 1 511 0 1298 289 38 27 chr10 102344251 102344698 -37972067 - LTR16B LTR ERVL -12 452 1 588 249 121 98 chr10 102344773 102344874 -37971891 + L2 LINE L2 2967 3064 -249 2005 138 0 7 chr10 102344874 102345172 -37971593 + AluSx SINE Alu 9 304 -8 588 249 121 98 chr10 102345172 102345408 -37971357 + L2 LINE L2 3064 3312 -1 627 310 29 6 chr10 102345538 102345712 -37971053 + MIR SINE MIR 5 182 -80 386 269 167 9 chr10 102346129 102346237 -37970528 - MIR SINE MIR -111 151 27 1063 308 33 26 chr10 102347290 102347314 -37969451 + MLT1K LTR MaLR 11 33 -555 2087 104 7 3 chr10 102347314 102347611 -37969154 - AluSq SINE Alu -14 299 2 1063 308 33 26 chr10 102347611 102348061 -37968704 + MLT1K LTR MaLR 33 519 -69 351 264 40 69 chr10 102348061 102348235 -37968530 + L2 LINE L2 3097 3265 -48 1892 153 131 6 chr10 102348676 102349028 -37967737 - MSTD LTR MaLR 0 396 1 271 235 129 83 chr10 102349773 102349905 -37966860 + MIR3 SINE MIR 2 139 -69 522 0 0 0 chr10 102349938 102349996 -37966769 + (TG)n Simple_repeat Simple_repeat 2 59 0 591 305 18 12 chr10 102350866 102351033 -37965732 - MIR SINE MIR -79 183 16 215 219 0 0 chr10 102351451 102351492 -37965273 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 189 313 76 76 chr10 102351600 102351744 -37965021 - L2 LINE L2 -212 3060 2917 624 272 136 58 chr10 102351812 102352194 -37964571 - L1M4 LINE L1 -1145 5001 4590 2066 126 0 3 chr10 102352524 102352825 -37963940 + AluSx SINE Alu 1 300 -12 454 271 93 21 chr10 102353192 102353332 -37963433 - L2 LINE L2 -5 3308 3159 1712 145 3 0 chr10 102354109 102354398 -37962367 + L1MA5A LINE L1 6008 6297 0 234 256 219 0 chr10 102354944 102355026 -37961739 - L2 LINE L2 0 3272 3173 195 370 85 18 chr10 102355178 102355343 -37961422 - MIR SINE MIR -67 195 20 549 290 58 75 chr10 102355554 102355930 -37960835 - MLT1K LTR MaLR 0 588 219 518 235 1 30 chr10 102356376 102356521 -37960244 - MIR SINE MIR -58 150 43 580 235 42 18 chr10 102357014 102357180 -37959585 - MIR3 SINE MIR -21 187 18 549 252 90 56 chr10 102357496 102357822 -37958943 - MLT1H LTR MaLR -3 621 208 1892 172 58 29 chr10 102358361 102358739 -37958026 + MLT1B LTR MaLR 1 389 -1 270 254 84 0 chr10 102359508 102359579 -37957186 - L2 LINE L2 -34 3238 3162 262 291 58 29 chr10 102359589 102359692 -37957073 + MIR3 SINE MIR 90 195 -13 196 282 24 59 chr10 102359796 102359881 -37956884 - L2 LINE L2 -808 2506 2425 231 283 116 105 chr10 102360363 102360621 -37956144 - L2 LINE L2 -3 3269 3009 236 254 17 0 chr10 102361431 102361490 -37955275 + CT-rich Low_complexity Low_complexity 6 65 0 707 281 67 13 chr10 102361923 102362147 -37954618 - MIR SINE MIR -4 258 23 393 281 47 8 chr10 102362939 102363090 -37953675 - MIR SINE MIR -61 147 19 189 293 100 14 chr10 102364054 102364194 -37952571 + L2 LINE L2 2825 2976 -296 1959 192 23 0 chr10 102364199 102364553 -37952212 - MLT1A1 LTR MaLR 0 365 4 384 281 71 83 chr10 102364564 102364817 -37951948 + L2 LINE L2 3003 3252 -20 2450 61 3 0 chr10 102365048 102365358 -37951407 - AluY SINE Alu 0 311 1 352 163 31 61 chr10 102365520 102365618 -37951147 - MIR SINE MIR -84 178 84 254 163 0 0 chr10 102365621 102365670 -37951095 - L1PB1 LINE L1 0 6151 6103 297 102 0 0 chr10 102365696 102365745 -37951020 + MLT1A1 LTR MaLR 60 108 -257 4357 125 12 0 chr10 102365752 102365933 -37950832 - L1PB1 LINE L1 -43 6108 5928 1560 279 26 6 chr10 102365933 102366441 -37950324 - L1MB2 LINE L1 -244 5927 5410 516 313 43 17 chr10 102366678 102366908 -37949857 - MIR SINE MIR 0 262 27 342 287 191 0 chr10 102368018 102368248 -37948517 + L2 LINE L2 2439 2712 -602 481 175 0 0 chr10 102368436 102368516 -37948249 + L2 LINE L2 3193 3272 0 210 203 102 17 chr10 102368741 102368800 -37947965 + L2 LINE L2 2970 3033 -239 2077 114 3 0 chr10 102369853 102370142 -37946623 - AluSx SINE Alu -22 290 1 863 226 34 71 chr10 102370178 102370385 -37946380 - L1ME3 LINE L1 -6 6156 5965 2163 125 0 0 chr10 102370385 102370696 -37946069 - AluSq SINE Alu -2 311 1 863 226 34 71 chr10 102370696 102370798 -37945967 - L1ME3 LINE L1 -197 5965 5861 203 333 0 0 chr10 102370828 102370876 -37945889 + L2 LINE L2 3210 3257 -15 588 181 268 6 chr10 102370897 102371075 -37945690 + MIR SINE MIR 37 256 -6 194 212 0 0 chr10 102371778 102371811 -37944954 - MIR SINE MIR -114 148 116 524 273 19 19 chr10 102372609 102372763 -37944002 - MIR SINE MIR 0 262 109 424 285 139 18 chr10 102372816 102372981 -37943784 - MIR3 SINE MIR -10 198 14 2167 103 3 7 chr10 102373836 102374137 -37942628 - AluSx SINE Alu -10 302 3 209 325 193 0 chr10 102374447 102374613 -37942152 + MIR SINE MIR 16 213 -49 328 286 13 0 chr10 102374895 102374972 -37941793 + MER5A DNA MER1_type 110 187 -2 198 239 111 51 chr10 102374989 102375106 -37941659 - L3 LINE CR1 -84 1493 1370 183 253 108 46 chr10 102375904 102376098 -37940667 + L2 LINE L2 2854 3059 -213 661 278 80 9 chr10 102376297 102376509 -37940256 - MIR SINE MIR 0 262 36 215 67 0 0 chr10 102376505 102376535 -37940230 + L2 LINE L2 3243 3272 0 * 2297 89 0 25 chr10 102377248 102377564 -37939201 - AluSg SINE Alu -2 308 1 449 190 13 0 chr10 102377912 102377991 -37938774 + L2 LINE L2 3223 3302 -11 779 304 21 16 chr10 102378625 102378997 -37937768 - L1ME4a LINE L1 -200 5921 5548 252 340 130 49 chr10 102379185 102379717 -37937048 + L2 LINE L2 1485 2059 -1255 637 288 66 95 chr10 102379780 102380277 -37936488 + MLT1K LTR MaLR 89 571 -17 612 206 23 30 chr10 102381444 102381575 -37935190 + FLAM_C SINE Alu 1 130 -3 259 286 168 25 chr10 102381761 102381922 -37934843 + MIR SINE MIR 5 188 -74 23 0 0 0 chr10 102381993 102382016 -37934749 + AT_rich Low_complexity Low_complexity 1 23 0 306 239 51 40 chr10 102383461 102383637 -37933128 + (CAGAGA)n Simple_repeat Simple_repeat 3 180 0 22 35 0 0 chr10 102383890 102383919 -37932846 + AT_rich Low_complexity Low_complexity 1 29 0 275 253 41 59 chr10 102383919 102384089 -37932676 - L1ME4a LINE L1 -1 6120 5954 1012 204 246 43 chr10 102384501 102384981 -37931784 - MLT1G3 LTR MaLR -2 528 38 227 100 0 25 chr10 102385368 102385408 -37931357 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1858 139 0 0 chr10 102385411 102385684 -37931081 + AluSx SINE Alu 22 294 -18 1895 167 0 0 chr10 102385687 102386028 -37930737 + AluSx SINE Alu 1 312 0 401 250 147 7 chr10 102386028 102386164 -37930601 + MER46C DNA MER2_type 181 335 -3 228 243 266 40 chr10 102386869 102387046 -37929719 - L1ME4a LINE L1 -23 6098 5882 619 151 79 24 chr10 102387062 102387188 -37929577 + AluJo SINE Alu 2 134 -178 243 125 0 0 chr10 102387224 102387264 -37929501 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2106 104 0 0 chr10 102387267 102387547 -37929218 - AluSg SINE Alu -30 280 1 237 320 59 1 chr10 102387582 102387689 -37929076 + MIR SINE MIR 34 142 -66 205 284 86 54 chr10 102388313 102388535 -37928230 - L2 LINE L2 -778 2536 2308 557 254 57 48 chr10 102388634 102388705 -37928060 + MARNA DNA Mariner 149 218 -368 2151 92 3 0 chr10 102388705 102388999 -37927766 + AluSg SINE Alu 2 296 -14 557 254 57 48 chr10 102388999 102389155 -37927610 + MARNA DNA Mariner 218 378 -208 258 158 0 53 chr10 102389211 102389268 -37927497 - L1MB8 LINE L1 0 6178 6125 383 214 54 9 chr10 102389276 102389388 -37927377 - L1MA4 LINE L1 -39 6261 6145 423 299 0 34 chr10 102389518 102389665 -37927100 + L2 LINE L2 3167 3308 -5 1471 207 64 90 chr10 102389762 102390217 -37926548 + LTR8 LTR ERV1 285 691 0 258 32 0 0 chr10 102390375 102390406 -37926359 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2669 145 29 4 chr10 102390425 102390879 -37925886 - L1MB2 LINE L1 -3 6168 5704 349 249 83 30 chr10 102391955 102392124 -37924641 - MER117 DNA MER1_type -19 178 1 928 280 19 73 chr10 102392293 102392512 -37924253 - L3 LINE CR1 -187 1390 1198 1983 160 0 0 chr10 102392512 102392824 -37923941 - AluJb SINE Alu 0 312 1 928 280 19 73 chr10 102392824 102392976 -37923789 - L3 LINE CR1 -379 1198 1039 232 324 137 44 chr10 102393170 102393374 -37923391 - L3 LINE CR1 -4 1573 1351 1694 203 20 0 chr10 102393392 102393698 -37923067 + AluJo SINE Alu 1 312 0 512 89 13 0 chr10 102393698 102393777 -37922988 + (GGAAA)n Simple_repeat Simple_repeat 5 84 0 189 167 56 0 chr10 102393805 102393841 -37922924 - MIR SINE MIR -15 247 210 190 336 50 50 chr10 102393915 102394034 -37922731 - L2 LINE L2 -77 3195 3077 1089 258 105 69 chr10 102394067 102394187 -37922578 + L2 LINE L2 2665 2779 -534 842 159 0 0 chr10 102394187 102394319 -37922446 + FLAM_C SINE Alu 1 132 -1 1089 258 105 69 chr10 102394319 102394805 -37921960 + L2 LINE L2 2779 3313 0 251 333 64 54 chr10 102394811 102394846 -37921919 - L3 LINE CR1 -1297 280 247 1944 162 7 0 chr10 102394846 102395148 -37921617 + AluJo SINE Alu 1 304 -8 251 333 64 54 chr10 102395148 102395316 -37921449 - L3 LINE CR1 -1330 247 75 936 284 4 17 chr10 102395660 102395896 -37920869 + MIR SINE MIR 3 235 -27 406 184 69 23 chr10 102396967 102397188 -37919577 + AluJb SINE Alu 205 429 0 836 251 79 31 chr10 102398056 102398283 -37918482 - MIR SINE MIR -15 247 10 723 156 8 0 chr10 102399027 102399155 -37917610 + FLAM_A SINE Alu 1 129 -4 705 151 7 75 chr10 102399193 102399288 -37917477 + MER2 DNA MER2_type 1 84 -261 1485 205 14 20 chr10 102399288 102399585 -37917180 + AluJo SINE Alu 2 296 -16 705 151 7 75 chr10 102399585 102399635 -37917130 + MER2 DNA MER2_type 84 136 -209 1981 151 3 3 chr10 102399665 102399977 -37916788 - AluSx SINE Alu 0 312 1 2577 93 21 13 chr10 102399988 102400366 -37916399 - L1PB1 LINE L1 -2 6149 5769 1972 57 0 0 chr10 102400373 102400617 -37916148 - L1PA3 LINE L1 -3 6152 5909 3028 149 68 0 chr10 102400618 102401441 -37915324 - L1PA3 LINE L1 -366 5785 4913 551 277 109 5 chr10 102402092 102402276 -37914489 + MIR SINE MIR 12 214 -48 640 268 170 5 chr10 102403700 102403924 -37912841 + MIR SINE MIR 2 262 0 1576 187 0 32 chr10 102404737 102405047 -37911718 - AluJo SINE Alu -12 300 1 324 343 77 28 chr10 102405566 102405747 -37911018 + MIR3 SINE MIR 16 205 -3 836 236 31 27 chr10 102409728 102409987 -37906778 - L1ME1 LINE L1 0 6961 6702 * 3721 218 99 23 chr10 102409982 102411426 -37905339 - L1ME1 LINE L1 -745 6216 4645 27 0 0 0 chr10 102411436 102411463 -37905302 + AT_rich Low_complexity Low_complexity 1 27 0 35574 80 14 17 chr10 102411463 102417594 -37899171 - L1PA6 LINE L1 -10 6144 11 1347 236 155 38 chr10 102417616 102417855 -37898910 - L1ME1 LINE L1 -4754 2187 1977 207 0 0 0 chr10 102417855 102417878 -37898887 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1347 236 155 38 chr10 102417878 102418706 -37898059 - L1ME1 LINE L1 -4964 1977 961 2039 136 39 9 chr10 102418706 102419044 -37897721 + MER7A DNA MER2_type 1 346 0 1347 236 155 38 chr10 102419044 102419204 -37897561 - L1ME1 LINE L1 -5980 961 821 241 304 93 30 chr10 102419246 102419516 -37897249 - L1ME1 LINE L1 -6107 316 30 604 330 56 76 chr10 102419637 102420477 -37896288 - L2 LINE L2 -1 3271 2453 382 306 119 12 chr10 102421339 102421499 -37895266 + MIR SINE MIR 48 224 -38 1263 142 23 0 chr10 102421574 102421793 -37894972 - MER46A DNA MER2_type 0 236 13 1643 190 9 38 chr10 102422150 102422466 -37894299 - AluJo SINE Alu -5 307 1 296 282 87 10 chr10 102422589 102422692 -37894073 - L2 LINE L2 -2 3270 3160 574 283 6 39 chr10 102423198 102423378 -37893387 + MIR SINE MIR 18 191 -71 1625 171 71 0 chr10 102424362 102424684 -37892081 + MER2 DNA MER2_type 1 345 0 33 25 0 0 chr10 102424744 102424784 -37891981 + AT_rich Low_complexity Low_complexity 1 40 0 239 220 40 92 chr10 102425012 102425080 -37891685 - MER112 DNA MER1_type -89 171 101 7022 60 7 0 chr10 102425080 102426263 -37890502 - L1PA6 LINE L1 -4 6150 4965 2155 111 0 0 chr10 102426267 102426547 -37890218 - AluSx SINE Alu -32 280 1 239 220 40 92 chr10 102426547 102426646 -37890119 - MER112 DNA MER1_type -162 98 8 5325 191 50 46 chr10 102426707 102428088 -37888677 + L1MB2 LINE L1 3123 4497 -1674 797 155 6 68 chr10 102428088 102428249 -37888516 - MER46A DNA MER2_type -85 151 1 391 225 35 92 chr10 102428096 102428269 -37888496 + MER46A DNA MER2_type 3 165 -71 * 5325 191 50 46 chr10 102428249 102429878 -37886887 + L1MB2 LINE L1 4497 6155 -16 183 267 0 0 chr10 102430656 102430701 -37886064 + L2 LINE L2 1614 1658 -1656 403 287 67 7 chr10 102430701 102430851 -37885914 + L2 LINE L2 1812 1970 -1344 22 35 0 0 chr10 102430854 102430883 -37885882 + AT_rich Low_complexity Low_complexity 1 29 0 693 186 8 8 chr10 102430893 102431017 -37885748 - AluJb SINE Alu -88 224 101 868 274 167 6 chr10 102431017 102431335 -37885430 + L2 LINE L2 2472 2840 -474 757 139 0 0 chr10 102431343 102431451 -37885314 - AluSg/x SINE Alu -16 294 187 1074 122 0 6 chr10 102431451 102431607 -37885158 - AluSg SINE Alu -92 218 64 987 308 127 5 chr10 102431630 102432049 -37884716 + L2 LINE L2 2844 3313 0 226 309 119 42 chr10 102432319 102432487 -37884278 - L2 LINE L2 -461 2853 2673 1172 187 96 1 chr10 102433316 102433604 -37883161 - MER33 DNA MER1_type -22 302 1 295 259 122 29 chr10 102434864 102435003 -37881762 - MIR SINE MIR 0 262 111 1027 152 6 23 chr10 102436306 102436477 -37880288 - FAM SINE Alu -5 44 1 1738 223 47 102 chr10 102436613 102436996 -37879769 + L1MC4 LINE L1 7160 7562 -480 2231 100 0 13 chr10 102436996 102437297 -37879468 + AluSg SINE Alu 1 297 -13 1738 223 47 102 chr10 102437297 102437846 -37878919 + L1MC4 LINE L1 7562 8041 -1 2101 110 20 0 chr10 102438551 102438851 -37877914 + AluSp SINE Alu 1 306 -7 1350 152 79 55 chr10 102439027 102439357 -37877408 + MER44D DNA MER2_type 2 609 0 2035 199 78 11 chr10 102439430 102439967 -37876798 - MER63 DNA MER1_type -3 1058 486 22 0 0 0 chr10 102440092 102440114 -37876651 + AT_rich Low_complexity Low_complexity 1 22 0 565 319 68 39 chr10 102440297 102440607 -37876158 - L3 LINE CR1 -102 1475 1157 831 318 73 55 chr10 102440607 102441185 -37875580 - L3 LINE CR1 -584 993 406 1558 169 6 69 chr10 102442147 102442466 -37874299 + AluJb SINE Alu 1 299 -13 22 56 0 0 chr10 102444666 102444702 -37872063 + AT_rich Low_complexity Low_complexity 1 36 0 215 294 209 26 chr10 102445065 102445208 -37871557 - MIR SINE MIR -27 181 17 630 192 294 0 chr10 102445620 102445766 -37870999 + MER5A DNA MER1_type 1 189 0 490 120 65 11 chr10 102448093 102448185 -37868580 - L1MC2 LINE L1 0 6344 6248 408 262 121 43 chr10 102449308 102449328 -37867437 - MIR3 SINE MIR -37 171 154 214 48 0 71 chr10 102449328 102449370 -37867395 + (CTAGT)n Simple_repeat Simple_repeat 4 42 0 408 262 121 43 chr10 102449370 102449490 -37867275 - MIR3 SINE MIR -54 154 20 1457 215 106 7 chr10 102449687 102450091 -37866674 - HsTC2 DNA Tc2 -3 1895 1452 236 236 0 18 chr10 102450104 102450159 -37866606 - HsTC2 DNA Tc2 -570 1328 1275 350 182 57 23 chr10 102450178 102450266 -37866499 - HsTC2 DNA Tc2 -1803 95 5 1380 139 5 5 chr10 102450657 102450866 -37865899 + AluJo SINE Alu 3 211 -101 1632 180 7 24 chr10 102451054 102451343 -37865422 - AluJo SINE Alu -28 284 1 210 325 36 0 chr10 102451402 102451485 -37865280 - L2 LINE L2 -1 3312 3227 6428 164 17 5 chr10 102451601 102452774 -37863991 - L1MCc LINE L1 -1110 5831 4645 545 128 88 0 chr10 102452777 102452879 -37863886 + L1MC/D LINE L1 3726 3836 -2310 506 214 88 6 chr10 102452907 102453089 -37863676 - L1MCc LINE L1 -2895 4046 3850 * 2259 177 65 7 chr10 102453088 102453385 -37863380 - L1MCc LINE L1 -3444 3497 3219 1914 148 35 0 chr10 102453385 102453675 -37863090 - AluSx SINE Alu -12 300 1 2259 177 65 7 chr10 102453675 102454204 -37862561 - L1MCc LINE L1 -3722 3219 2618 2988 145 70 3 chr10 102454238 102454837 -37861928 - L1MCc LINE L1 -4474 2468 1830 14014 30 1 0 chr10 102454850 102457181 -37859584 - L1PA2 LINE L1 -2 6153 3815 5477 40 0 0 chr10 102457181 102457840 -37858925 + L1PA2 LINE L1 3168 3826 -2320 3057 254 68 22 chr10 102457825 102458717 -37858048 - L1MCc LINE L1 -5085 1857 925 * 1255 172 110 4 chr10 102459380 102459653 -37857112 - MER33 DNA MER1_type -22 302 1 1643 147 27 27 chr10 102460311 102460603 -37856162 - AluJb SINE Alu -20 292 1 1739 171 59 52 chr10 102460755 102461181 -37855584 + L1MC/D LINE L1 4364 4792 -1354 1479 212 27 35 chr10 102461180 102461548 -37855217 - L1MCc LINE L1 -6044 379 15 * 433 226 68 34 chr10 102461609 102461755 -37855010 - MIR SINE MIR -14 248 98 21 36 0 0 chr10 102461766 102461794 -37854971 + AT_rich Low_complexity Low_complexity 1 28 0 20475 39 5 2 chr10 102462045 102465202 -37851563 - L1PA5 LINE L1 0 6154 2990 912 229 14 0 chr10 102465794 102466008 -37850757 + L1MC/D LINE L1 5066 5282 -864 5437 127 41 3 chr10 102466016 102466932 -37849833 - L1PA16 LINE L1 0 6166 5200 3028 156 47 4 chr10 102466934 102467461 -37849304 + L1MC/D LINE L1 5260 5809 -535 2826 220 142 50 chr10 102467563 102468344 -37848421 + MSTD-int LTR MaLR 799 1721 0 1884 130 154 12 chr10 102468344 102468689 -37848076 + MSTD LTR MaLR 1 394 -2 980 201 113 68 chr10 102469345 102469759 -37847006 - LTR8A LTR ERV1 -7 720 288 311 243 135 75 chr10 102469816 102470088 -37846677 - LTR8 LTR ERV1 -398 143 1 610 292 90 36 chr10 102470468 102470855 -37845910 - L1MC/D LINE L1 -1999 5809 5402 2499 71 0 0 chr10 102471025 102471336 -37845429 - AluY SINE Alu 0 311 1 822 142 7 7 chr10 102471338 102471479 -37845286 - AluJb SINE Alu -8 304 164 4350 91 22 3 chr10 102472964 102473560 -37843205 + HERV17 LTR ERV1 868 1474 -7152 * 6333 56 5 1 chr10 102473531 102474301 -37842464 + HERV17 LTR ERV1 2490 3262 -5364 251 224 66 13 chr10 102474401 102474477 -37842288 + L2 LINE L2 3225 3304 -9 1826 158 31 10 chr10 102474545 102474836 -37841929 + AluJb SINE Alu 1 297 -15 1272 215 60 10 chr10 102474853 102475155 -37841610 - MER58B DNA MER1_type -24 317 1 1014 226 49 19 chr10 102475764 102476029 -37840736 - MER4D LTR ERV1 0 903 631 682 160 0 0 chr10 102476032 102476138 -37840627 - AluJb SINE Alu -12 300 195 379 228 0 0 chr10 102476138 102476217 -37840548 - LTR39 LTR ERV1 -313 470 392 1019 177 39 33 chr10 102476256 102476479 -37840286 - MER49 LTR ERV1 -629 294 21 1766 157 50 0 chr10 102476479 102476760 -37840005 - AluSx SINE Alu -17 295 1 1019 177 39 33 chr10 102476760 102476782 -37839983 - MER49 LTR ERV1 -902 21 1 2150 111 24 3 chr10 102476833 102477131 -37839634 - AluSx SINE Alu -3 309 6 2191 114 0 7 chr10 102478266 102478565 -37838200 - AluSq SINE Alu -16 297 1 1222 223 28 28 chr10 102479022 102479138 -37837627 + L1M4 LINE L1 3634 3749 -2397 2412 92 3 0 chr10 102479138 102479444 -37837321 + AluSx SINE Alu 1 307 -5 1222 223 28 28 chr10 102479444 102479654 -37837111 + L1M4 LINE L1 3748 3960 -2186 2300 119 0 0 chr10 102479654 102479966 -37836799 + AluSq SINE Alu 1 312 -1 2001 121 3 3 chr10 102480631 102480913 -37835852 - AluSc SINE Alu -26 283 2 2367 102 3 0 chr10 102481449 102481754 -37835011 - AluSq SINE Alu -5 308 3 987 83 41 14 chr10 102481916 102482061 -37834704 - LTR17 LTR ERV1 -376 404 256 1666 218 66 83 chr10 102482457 102483080 -37833685 + LTR9 LTR ERV1 1 612 0 2459 93 0 3 chr10 102484188 102484501 -37832264 - AluSx SINE Alu 0 312 1 1005 135 31 72 chr10 102484501 102484723 -37832042 + THE1C LTR MaLR 163 375 0 210 213 0 43 chr10 102484723 102484770 -37831995 - MIR SINE MIR -70 192 148 207 0 0 0 chr10 102484780 102484803 -37831962 + (A)n Simple_repeat Simple_repeat 1 23 0 405 158 49 0 chr10 102484814 102484896 -37831869 - L1MA8 LINE L1 -4 6287 6202 1128 179 0 6 chr10 102484902 102485120 -37831645 - L1M3 LINE L1 -432 5739 5526 531 380 50 26 chr10 102535212 102535633 -37781132 - L2 LINE L2 -431 2883 2453 388 306 119 12 chr10 102536495 102536655 -37780110 + MIR SINE MIR 48 224 -38 1339 142 23 0 chr10 102536730 102536820 -37779945 - MER46A DNA MER2_type 0 236 142 479 185 62 68 chr10 102536820 102536966 -37779799 + MER46A DNA MER2_type 4 148 -88 1585 187 9 38 chr10 102537306 102537622 -37779143 - AluJo SINE Alu -5 307 1 303 282 87 10 chr10 102537745 102537848 -37778917 - L2 LINE L2 -2 3270 3160 577 283 6 39 chr10 102538353 102538533 -37778232 + MIR SINE MIR 18 191 -71 1692 149 78 9 chr10 102539517 102539839 -37776926 + MER2 DNA MER2_type 1 344 0 33 25 0 0 chr10 102539899 102539939 -37776826 + AT_rich Low_complexity Low_complexity 1 40 0 294 220 40 92 chr10 102540167 102540235 -37776530 - MER112 DNA MER1_type -89 171 101 6997 60 7 0 chr10 102540235 102541418 -37775347 - L1PA6 LINE L1 -4 6150 4965 2112 111 0 0 chr10 102541422 102541702 -37775063 - AluSx SINE Alu -32 280 1 294 220 40 92 chr10 102541702 102541801 -37774964 - MER112 DNA MER1_type -162 98 8 5995 204 49 86 chr10 102541862 102543243 -37773522 + L1MB2 LINE L1 3123 4554 -1617 850 155 6 68 chr10 102543243 102543404 -37773361 - MER46A DNA MER2_type -85 151 1 438 220 35 92 chr10 102543251 102543424 -37773341 + MER46A DNA MER2_type 3 165 -71 * 5995 204 49 86 chr10 102543404 102545033 -37771732 + L1MB2 LINE L1 4554 6155 -16 183 267 0 0 chr10 102545811 102545856 -37770909 + L2 LINE L2 1614 1658 -1656 396 287 67 7 chr10 102545856 102546006 -37770759 + L2 LINE L2 1812 1970 -1344 22 35 0 0 chr10 102546009 102546038 -37770727 + AT_rich Low_complexity Low_complexity 1 29 0 689 186 8 8 chr10 102546048 102546172 -37770593 - AluJb SINE Alu -88 224 101 863 274 167 6 chr10 102546172 102546490 -37770275 + L2 LINE L2 2472 2840 -474 752 139 0 0 chr10 102546498 102546606 -37770159 - AluSg/x SINE Alu -16 294 187 1070 122 0 6 chr10 102546606 102546762 -37770003 - AluSg SINE Alu -92 218 64 938 318 127 2 chr10 102546785 102547203 -37769562 + L2 LINE L2 2844 3313 0 229 309 119 42 chr10 102547473 102547641 -37769124 - L2 LINE L2 -461 2853 2673 1250 187 96 1 chr10 102548468 102548756 -37768009 - MER33 DNA MER1_type -22 302 1 298 259 122 29 chr10 102550016 102550155 -37766610 - MIR SINE MIR 0 262 111 1011 152 6 23 chr10 102551458 102551629 -37765136 - FAM SINE Alu -5 44 1 1966 223 47 102 chr10 102551765 102552148 -37764617 + L1MC4 LINE L1 7160 7562 -480 2193 103 0 13 chr10 102552148 102552449 -37764316 + AluSg SINE Alu 1 297 -13 1966 223 47 102 chr10 102552449 102552998 -37763767 + L1MC4 LINE L1 7562 8041 -1 2104 94 21 0 chr10 102553703 102553990 -37762775 + AluSp SINE Alu 1 293 -20 1369 152 79 55 chr10 102554179 102554509 -37762256 + MER44D DNA MER2_type 2 609 0 2192 200 81 11 chr10 102554582 102555127 -37761638 - MER63 DNA MER1_type -3 1058 476 22 0 0 0 chr10 102555244 102555266 -37761499 + AT_rich Low_complexity Low_complexity 1 22 0 574 319 68 39 chr10 102555449 102555759 -37761006 - L3 LINE CR1 -102 1475 1157 865 318 73 55 chr10 102555759 102556337 -37760428 - L3 LINE CR1 -584 993 406 1536 169 6 69 chr10 102557299 102557618 -37759147 + AluJb SINE Alu 1 299 -13 22 56 0 0 chr10 102559818 102559854 -37756911 + AT_rich Low_complexity Low_complexity 1 36 0 185 284 30 60 chr10 102560028 102560095 -37756670 - MIR3 SINE MIR -6 202 138 222 301 196 42 chr10 102560217 102560360 -37756405 - MIR SINE MIR -27 181 17 567 192 294 0 chr10 102560772 102560918 -37755847 + MER5A DNA MER1_type 1 189 0 450 120 65 11 chr10 102563245 102563337 -37753428 - L1MC2 LINE L1 0 6344 6248 406 262 121 43 chr10 102564460 102564480 -37752285 - MIR3 SINE MIR -37 171 154 214 48 0 71 chr10 102564480 102564522 -37752243 + (CTAGT)n Simple_repeat Simple_repeat 4 42 0 406 262 121 43 chr10 102564522 102564642 -37752123 - MIR3 SINE MIR -54 154 20 1392 220 106 10 chr10 102564839 102565244 -37751521 - HsTC2 DNA Tc2 -3 1895 1452 232 236 0 18 chr10 102565257 102565312 -37751453 - HsTC2 DNA Tc2 -570 1328 1275 338 182 57 23 chr10 102565331 102565419 -37751346 - HsTC2 DNA Tc2 -1803 95 5 1379 139 5 5 chr10 102565810 102566019 -37750746 + AluJo SINE Alu 3 211 -101 1637 180 7 24 chr10 102566207 102566496 -37750269 - AluJo SINE Alu -28 284 1 228 325 36 0 chr10 102566555 102566638 -37750127 - L2 LINE L2 -1 3312 3227 6212 164 17 5 chr10 102566754 102567927 -37748838 - L1MCc LINE L1 -1110 5831 4645 521 126 89 0 chr10 102567930 102568042 -37748723 + L1M4 LINE L1 3726 3846 -2300 471 214 88 6 chr10 102568060 102568242 -37748523 - L1MCc LINE L1 -2895 4046 3850 * 2171 174 66 7 chr10 102568241 102568538 -37748227 - L1MCc LINE L1 -3444 3497 3219 1899 148 35 0 chr10 102568538 102568828 -37747937 - AluSx SINE Alu -12 300 1 2171 174 66 7 chr10 102568828 102569357 -37747408 - L1MCc LINE L1 -3722 3219 2618 2883 146 70 3 chr10 102569391 102569987 -37746778 - L1MCc LINE L1 -4474 2468 1833 13130 30 1 0 chr10 102570003 102572334 -37744431 - L1PA2 LINE L1 -2 6153 3815 5342 37 0 0 chr10 102572334 102572990 -37743775 + L1PA2 LINE L1 3168 3823 -2323 3063 244 70 27 chr10 102572978 102573865 -37742900 - L1MCc LINE L1 -5085 1857 933 * 1201 172 110 4 chr10 102574533 102574806 -37741959 - MER33 DNA MER1_type -22 302 1 1636 147 27 27 chr10 102575464 102575756 -37741009 - AluJb SINE Alu -20 292 1 1646 171 59 52 chr10 102575908 102576334 -37740431 + L1M4 LINE L1 4364 4792 -1354 1427 212 27 35 chr10 102576333 102576701 -37740064 - L1MCc LINE L1 -6044 379 15 * 442 226 68 34 chr10 102576762 102576908 -37739857 - MIR SINE MIR -14 248 98 21 36 0 0 chr10 102576919 102576947 -37739818 + AT_rich Low_complexity Low_complexity 1 28 0 19172 39 5 2 chr10 102577198 102580355 -37736410 - L1PA5 LINE L1 0 6154 2990 225 186 42 85 chr10 102581555 102581673 -37735092 - L1MEc LINE L1 -4115 2281 2169 1555 155 0 4 chr10 102581674 102581906 -37734859 - AluJb SINE Alu -81 231 1 332 214 90 11 chr10 102582381 102582470 -37734295 - MER58A DNA MER1_type 0 139 44 238 213 49 33 chr10 102582560 102582621 -37734144 - MLT1J LTR MaLR -449 62 1 402 270 98 23 chr10 102583061 102583235 -37733530 - MIR SINE MIR -13 249 63 966 174 12 95 chr10 102584640 102584881 -37731884 - MER58A DNA MER1_type -3 221 1 376 198 16 99 chr10 102587511 102587632 -37729133 + MIR SINE MIR 29 139 -123 242 346 37 9 chr10 102587875 102587982 -37728783 - L2 LINE L2 -18 3254 3145 311 282 100 18 chr10 102588203 102588313 -37728452 - MIR SINE MIR -143 119 1 663 269 42 5 chr10 102588381 102588574 -37728191 - L3b LINE CR1 -120 1463 1264 484 238 27 47 chr10 102588601 102588802 -37727963 + MIR SINE MIR 34 231 -31 278 292 34 11 chr10 102588864 102588953 -37727812 - MER117 DNA MER1_type -5 192 102 257 242 0 32 chr10 102589076 102589138 -37727627 + L2 LINE L2 3213 3272 0 1776 167 10 0 chr10 102589314 102589607 -37727158 - AluJb SINE Alu -16 296 1 2255 115 0 0 chr10 102589636 102589941 -37726824 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr10 102590073 102590103 -37726662 + AT_rich Low_complexity Low_complexity 1 30 0 413 340 118 58 chr10 102590424 102591116 -37725649 - L3 LINE CR1 -817 760 27 582 271 36 0 chr10 102591359 102591503 -37725262 + MIR SINE MIR 16 163 -57 1993 132 0 14 chr10 102591675 102591971 -37724794 + AluSx SINE Alu 1 292 -20 835 187 154 41 chr10 102591973 102592219 -37724546 - MER46C DNA MER2_type -44 294 21 669 288 157 29 chr10 102598812 102599257 -37717508 + LTR33 LTR ERVL 1 502 -19 279 231 157 66 chr10 102599686 102599807 -37716958 - MIR3 SINE MIR -62 146 15 294 305 11 42 chr10 102599954 102600049 -37716716 + L2 LINE L2 3180 3271 -1 289 178 67 78 chr10 102600862 102600952 -37715813 - MIR SINE MIR -55 207 119 423 319 31 31 chr10 102603608 102603771 -37712994 + MIR SINE MIR 5 167 -95 390 151 0 41 chr10 102604792 102604865 -37711900 + MER112 DNA MER1_type 6 75 -185 422 346 47 5 chr10 102605387 102605601 -37711164 - L3 LINE CR1 -33 1544 1322 435 292 128 41 chr10 102605792 102606192 -37710573 + L2 LINE L2 2508 3027 -245 298 287 35 0 chr10 102606215 102606302 -37710463 + L2 LINE L2 3176 3265 -7 418 301 110 6 chr10 102606587 102606750 -37710015 + MIR3 SINE MIR 4 183 -25 615 224 117 45 chr10 102608249 102608472 -37708293 - MER113 DNA MER1_type? -158 363 125 311 298 10 0 chr10 102610837 102610941 -37705824 - MIR3 SINE MIR -39 169 65 199 316 53 26 chr10 102612081 102612157 -37704608 - L2 LINE L2 0 3313 3236 737 240 86 32 chr10 102612946 102613167 -37703598 + MIR SINE MIR 29 261 -1 310 219 19 161 chr10 102613384 102613460 -37703305 + MIR3 SINE MIR 66 111 -97 2339 100 0 7 chr10 102613460 102613770 -37702995 - AluSg1 SINE Alu -1 308 1 310 219 19 161 chr10 102613770 102613848 -37702917 + MIR3 SINE MIR 111 198 -10 257 260 154 48 chr10 102613873 102613977 -37702788 - L2 LINE L2 0 3272 3158 264 313 150 0 chr10 102613986 102614133 -37702632 - L2 LINE L2 -217 3055 2887 243 257 188 30 chr10 102614771 102614872 -37701893 + L2 LINE L2 3194 3310 -3 927 226 29 10 chr10 102614881 102615089 -37701676 + MIR SINE MIR 8 219 -43 1844 143 32 7 chr10 102615111 102615436 -37701329 - AluSq SINE Alu 0 332 1 301 271 148 8 chr10 102616005 102616127 -37700638 + MIR3 SINE MIR 60 198 -10 221 286 104 78 chr10 102616381 102616612 -37700153 + L2 LINE L2 2854 3090 -182 238 254 16 16 chr10 102616724 102616787 -37699978 + GA-rich Low_complexity Low_complexity 4 66 0 435 171 261 18 chr10 102616823 102616934 -37699831 - MIR SINE MIR -113 149 12 38 96 0 0 chr10 102617969 102618084 -37698681 + GC_rich Low_complexity Low_complexity 1 115 0 21 57 0 0 chr10 102618102 102618137 -37698628 + GC_rich Low_complexity Low_complexity 1 35 0 181 279 76 38 chr10 102618667 102618746 -37698019 - MIR SINE MIR -118 144 63 250 288 252 14 chr10 102619075 102619214 -37697551 - L2 LINE L2 -1 3271 3100 288 313 24 0 chr10 102620049 102620132 -37696633 + L2 LINE L2 3188 3272 0 372 234 53 0 chr10 102620319 102620413 -37696352 - MIR SINE MIR -105 157 59 244 331 71 55 chr10 102620930 102621057 -37695708 + MIR3 SINE MIR 9 137 -71 287 213 53 40 chr10 102621354 102621429 -37695336 - L2 LINE L2 -56 3216 3141 988 266 121 28 chr10 102621846 102622319 -37694446 - MER115 DNA AcHobo 0 693 177 271 229 43 0 chr10 102622389 102622459 -37694306 - MER115 DNA AcHobo -617 76 4 215 59 0 29 chr10 102623224 102623258 -37693507 + (TCC)n Simple_repeat Simple_repeat 2 34 0 2145 144 0 3 chr10 102624071 102624384 -37692381 - AluSx SINE Alu 0 312 1 843 223 16 16 chr10 102624886 102625074 -37691691 + MER5A DNA MER1_type 1 188 -1 1275 50 6 16 chr10 102625812 102625994 -37690771 + (GAA)n Simple_repeat Simple_repeat 1 180 0 208 256 151 35 chr10 102626574 102626660 -37690105 - L2 LINE L2 -2 3311 3216 2532 249 37 49 chr10 102627115 102627284 -37689481 - L1MDa LINE L1 -1325 5215 5045 2049 151 0 0 chr10 102627284 102627591 -37689174 - AluSx SINE Alu 0 307 1 2532 249 37 49 chr10 102627591 102628864 -37687901 - L1MDa LINE L1 -1495 5045 3758 2171 85 7 11 chr10 102628864 102629185 -37687580 - AluSc SINE Alu 0 320 1 2532 249 37 49 chr10 102629185 102629264 -37687501 - L1MDa LINE L1 -2782 3758 3680 4027 116 18 3 chr10 102629264 102629517 -37687248 + L1PB1 LINE L1 5535 5783 -368 477 0 0 0 chr10 102629517 102629570 -37687195 + (TA)n Simple_repeat Simple_repeat 2 54 0 4027 116 18 3 chr10 102629570 102629920 -37686845 + L1PB1 LINE L1 5783 6147 -4 2532 249 37 49 chr10 102629920 102630391 -37686374 - L1MDa LINE L1 -2860 3680 2632 951 189 21 12 chr10 102630421 102630664 -37686101 + L1MDa LINE L1 1134 1378 -5162 * 6854 205 42 30 chr10 102630651 102632338 -37684427 - L1MDa LINE L1 -4417 2123 416 383 329 49 80 chr10 102632565 102632930 -37683835 + L2 LINE L2 2918 3271 -1 259 315 89 26 chr10 102633051 102633321 -37683444 + L1ME1 LINE L1 30 316 -6107 1380 244 153 35 chr10 102633363 102633523 -37683242 + L1ME1 LINE L1 821 961 -5980 2093 136 39 9 chr10 102633523 102633861 -37682904 - MER7A DNA MER2_type 0 346 1 1380 244 153 35 chr10 102633861 102634689 -37682076 + L1ME1 LINE L1 961 1978 -4963 207 0 0 0 chr10 102634689 102634712 -37682053 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1380 244 153 35 chr10 102634712 102634951 -37681814 + L1ME1 LINE L1 1978 2187 -4754 36254 80 14 17 chr10 102634973 102641104 -37675661 + L1PA6 LINE L1 11 6144 -10 27 0 0 0 chr10 102641104 102641131 -37675634 + AT_rich Low_complexity Low_complexity 1 27 0 3861 223 96 21 chr10 102641141 102642585 -37674180 + L1ME1 LINE L1 4645 6216 -745 870 236 31 27 chr10 102642580 102642839 -37673926 + L1ME1 LINE L1 6702 6961 0 * 312 343 77 28 chr10 102646796 102646977 -37669788 - MIR3 SINE MIR -3 205 16 1612 187 0 32 chr10 102647496 102647806 -37668959 + AluJo SINE Alu 1 300 -12 639 268 170 5 chr10 102648619 102648843 -37667922 - MIR SINE MIR 0 262 2 544 277 109 5 chr10 102650267 102650451 -37666314 - MIR SINE MIR -48 214 12 1259 194 3 82 chr10 102651126 102651430 -37665335 - L1MDa LINE L1 -6257 283 4 720 227 53 56 chr10 102651405 102651584 -37665181 - L1M4 LINE L1 -2521 4019 3841 * 2156 137 0 9 chr10 102651584 102651899 -37664866 - AluSx SINE Alu 0 312 1 720 227 53 56 chr10 102651899 102652093 -37664672 - L1M4 LINE L1 -2699 3841 3647 416 359 71 30 chr10 102652209 102652802 -37663963 - HERV16 LTR ERVL -4341 655 39 619 280 72 49 chr10 102652828 102653135 -37663630 - LTR16C LTR ERVL -4 487 174 1232 222 119 19 chr10 102653477 102653896 -37662869 + MLT1C LTR MaLR 7 467 0 191 129 32 0 chr10 102655340 102655371 -37661394 - MER5B DNA MER1_type 0 178 147 2597 180 39 75 chr10 102655464 102655504 -37661261 - MLT2B3 LTR ERVL -2 552 512 363 44 0 0 chr10 102655504 102655549 -37661216 + (TC)n Simple_repeat Simple_repeat 1 45 0 2597 180 39 75 chr10 102655549 102656080 -37660685 - MLT2B3 LTR ERVL -42 512 2 184 286 89 0 chr10 102656248 102656304 -37660461 + L2 LINE L2 3248 3308 -5 226 296 37 58 chr10 102656366 102656444 -37660321 + L1MC/D LINE L1 5750 5828 -1980 3683 106 21 0 chr10 102656444 102656973 -37659792 + L1PA15 LINE L1 5625 6164 -1 226 296 37 58 chr10 102656973 102657083 -37659682 + L1MC/D LINE L1 5828 5934 -1874 2313 103 0 3 chr10 102657111 102657412 -37659353 - AluSq SINE Alu -13 300 1 1165 191 102 40 chr10 102657615 102657804 -37658961 - MER2 DNA MER2_type -1 344 125 1581 95 41 5 chr10 102657804 102658025 -37658740 - MER30 DNA MER1_type -1 229 1 1165 191 102 40 chr10 102658025 102658159 -37658606 - MER2 DNA MER2_type -220 125 1 268 304 131 18 chr10 102658279 102658447 -37658318 - MER5A DNA MER1_type 0 189 3 21 57 0 0 chr10 102659759 102659794 -37656971 + AT_rich Low_complexity Low_complexity 1 35 0 658 325 37 4 chr10 102659811 102660054 -37656711 - MIR SINE MIR -4 258 8 2047 228 40 37 chr10 102660811 102661408 -37655357 + L1ME1 LINE L1 5527 6125 -41 35 0 0 0 chr10 102663405 102663440 -37653325 + AT_rich Low_complexity Low_complexity 1 35 0 1793 149 4 0 chr10 102663440 102663702 -37653063 - AluJb SINE Alu -47 265 3 1379 208 287 19 chr10 102663802 102664418 -37652347 + LTR50 LTR ERVL 15 795 0 490 289 23 52 chr10 102664961 102665134 -37651631 - MIR3 SINE MIR -11 197 30 479 277 28 23 chr10 102665853 102666030 -37650735 + MER5B DNA MER1_type 1 178 0 1146 24 42 0 chr10 102666545 102666710 -37650055 + (TCTA)n Simple_repeat Simple_repeat 3 174 0 255 60 60 0 chr10 102667198 102667248 -37649517 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 509 356 46 13 chr10 102667524 102667763 -37649002 - MIR SINE MIR -15 247 1 290 299 103 0 chr10 102669430 102669527 -37647238 + MER91B DNA MER1_type 4 110 -80 360 271 21 21 chr10 102669558 102669654 -37647111 + MER91B DNA MER1_type 94 189 -1 608 298 78 19 chr10 102671015 102671113 -37645652 - MIR SINE MIR 0 262 171 1317 225 78 23 chr10 102671113 102671459 -37645306 - MLT1A1 LTR MaLR 0 365 1 608 298 78 19 chr10 102671459 102671565 -37645200 - MIR SINE MIR -91 171 46 262 296 101 26 chr10 102671942 102672065 -37644700 + MER5A DNA MER1_type 36 187 -2 240 241 63 25 chr10 102671996 102672075 -37644690 - MER5A DNA MER1_type -101 88 7 * 278 297 84 30 chr10 102672318 102672520 -37644245 + L2 LINE L2 2716 2928 -386 271 310 35 0 chr10 102672699 102672786 -37643979 + L2 LINE L2 3144 3233 -39 269 172 17 35 chr10 102673027 102673085 -37643680 + L2 LINE L2 3003 3059 -254 440 256 78 93 chr10 102673225 102673689 -37643076 - MLT1K LTR MaLR 0 588 132 1047 97 185 5 chr10 102673944 102674139 -37642626 - MER30 DNA MER1_type 0 230 1 * 1983 172 43 15 chr10 102674139 102674183 -37642582 - MSTA LTR MaLR -23 405 364 1777 153 14 11 chr10 102674183 102674494 -37642271 + AluJo SINE Alu 1 312 0 1983 172 43 15 chr10 102674494 102674842 -37641923 - MSTA LTR MaLR -64 364 1 407 250 58 10 chr10 102674843 102674947 -37641818 - MIR SINE MIR -131 131 23 740 250 27 18 chr10 102675066 102675286 -37641479 - MLT1I LTR MaLR 0 409 188 2177 104 7 0 chr10 102675862 102676166 -37640599 - AluSx SINE Alu 0 306 1 344 271 132 21 chr10 102677959 102678103 -37638662 + MIR3 SINE MIR 3 162 -46 974 106 0 0 chr10 102678731 102678863 -37637902 + FLAM_C SINE Alu 1 132 -1 1977 102 16 0 chr10 102680019 102680273 -37636492 + AluSq SINE Alu 1 258 -55 219 322 11 23 chr10 102680501 102680588 -37636177 + MIR3 SINE MIR 86 171 -37 341 248 133 0 chr10 102680693 102680798 -37635967 + MER94 DNA DNA 8 126 -8 411 314 65 18 chr10 102681109 102681278 -37635487 - MIR SINE MIR -50 212 36 356 252 63 36 chr10 102682101 102682212 -37634553 - L2 LINE L2 0 3272 3159 224 271 51 0 chr10 102683249 102683308 -37633457 + MIR SINE MIR 89 150 -112 804 271 45 9 chr10 102683438 102683659 -37633106 - MIR SINE MIR -6 256 28 409 278 159 7 chr10 102683952 102684103 -37632662 - MIR SINE MIR -66 196 23 318 267 24 88 chr10 102684206 102684389 -37632376 - MIR SINE MIR -54 208 31 279 240 0 0 chr10 102684899 102684949 -37631816 - L2 LINE L2 -20 3293 3244 * 824 291 79 0 chr10 102684944 102685171 -37631594 + MIR SINE MIR 16 260 -2 1275 227 160 12 chr10 102686345 102686776 -37629989 + MLT1D LTR MaLR 3 497 -8 187 238 24 0 chr10 102687668 102687710 -37629055 + MER5A DNA MER1_type 147 189 0 352 291 8 52 chr10 102688773 102688907 -37627858 - L2 LINE L2 -2 3270 3143 222 344 112 0 chr10 102689605 102689730 -37627035 + MIR SINE MIR 122 260 -2 509 299 92 27 chr10 102689913 102690251 -37626514 + L2 LINE L2 2913 3272 0 238 229 100 14 chr10 102690344 102690414 -37626351 - MIR SINE MIR -86 122 47 432 227 0 0 chr10 102690666 102690754 -37626011 - MIR SINE MIR -129 133 46 189 342 25 13 chr10 102691408 102691487 -37625278 + L2 LINE L2 3193 3272 0 1592 279 43 17 chr10 102691527 102692060 -37624705 + MLT1H LTR MaLR 3 549 0 232 357 41 10 chr10 102692248 102692346 -37624419 - L2 LINE L2 -4 3268 3168 893 284 159 90 chr10 102692667 102692899 -37623866 + L3 LINE CR1 810 1025 -552 2175 112 3 3 chr10 102692899 102693193 -37623572 - AluSx SINE Alu -18 294 1 893 284 159 90 chr10 102693193 102693672 -37623093 + L3 LINE CR1 1025 1570 -7 2067 125 4 0 chr10 102694233 102694539 -37622226 - AluSx SINE Alu 0 308 2 999 263 51 0 chr10 102694566 102694802 -37621963 - MIR SINE MIR -2 260 13 358 245 10 51 chr10 102696198 102696296 -37620469 + MIR3 SINE MIR 115 208 0 201 303 225 28 chr10 102696726 102696944 -37619821 + MIR SINE MIR 2 262 0 618 260 108 53 chr10 102697216 102697527 -37619238 - MLT1H LTR MaLR 0 409 111 1927 121 0 7 chr10 102697527 102697808 -37618957 + AluSx SINE Alu 1 279 -33 618 260 108 53 chr10 102697808 102697902 -37618863 - MLT1H LTR MaLR -298 111 24 454 224 67 36 chr10 102699216 102699381 -37617384 + L1ME4a LINE L1 5952 6121 0 584 291 51 68 chr10 102699657 102700011 -37616754 + L1ME4a LINE L1 5550 5897 -224 463 360 27 5 chr10 102701124 102701310 -37615455 - MIR SINE MIR -53 209 20 3587 206 72 122 chr10 102701778 102702885 -37613880 - L1MC4 LINE L1 -2 8040 6879 1605 88 31 18 chr10 102702885 102703112 -37613653 - MER30 DNA MER1_type 0 230 1 3587 206 72 122 chr10 102703112 102703517 -37613248 - L1MC4 LINE L1 -1163 6879 6616 226 0 59 0 chr10 102703517 102703551 -37613214 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 3587 206 72 122 chr10 102703551 102703702 -37613063 - L1MC4 LINE L1 -1426 6616 6459 206 206 0 0 chr10 102703820 102703854 -37612911 + polypurine Low_complexity Low_complexity 4 37 0 1527 156 22 64 chr10 102703979 102704293 -37612472 - AluJb SINE Alu -11 301 1 364 136 17 0 chr10 102704567 102704626 -37612139 - MER69 DNA AcHobo -11 2515 2456 321 287 52 17 chr10 102705425 102705540 -37611225 + MIR SINE MIR 43 161 -101 714 252 6 0 chr10 102705599 102705758 -37611007 - MIR SINE MIR -31 231 72 2037 110 0 3 chr10 102706245 102706527 -37610238 + AluSg SINE Alu 1 281 -29 311 243 45 19 chr10 102706820 102706989 -37609776 + MIR SINE MIR 23 230 -32 1221 223 35 20 chr10 102707092 102707443 -37609322 - L1ME1 LINE L1 -5 6161 5814 190 271 146 0 chr10 102707690 102707738 -37609027 - MER5B DNA MER1_type -60 118 64 2193 113 0 0 chr10 102707823 102708125 -37608640 + AluSx SINE Alu 1 302 -10 365 317 108 16 chr10 102708987 102709173 -37607592 + L2 LINE L2 2503 2705 -609 249 366 74 6 chr10 102709436 102709611 -37607154 + L3 LINE CR1 1284 1470 -107 1476 151 39 8 chr10 102709745 102710004 -37606761 - L1PB4 LINE L1 -2 6154 5888 2196 107 0 7 chr10 102710035 102710344 -37606421 - AluSc SINE Alu -2 307 1 260 136 23 0 chr10 102710940 102710984 -37605781 + L2 LINE L2 3261 3305 -8 216 276 206 55 chr10 102711353 102711552 -37605213 + MIR SINE MIR 12 240 -22 316 326 21 0 chr10 102711672 102711767 -37604998 - MIR3 SINE MIR -25 183 87 2153 123 0 3 chr10 102711783 102712092 -37604673 + AluSx SINE Alu 1 308 -4 247 195 0 172 chr10 102713453 102713540 -37603225 + MIR SINE MIR 117 188 -74 433 321 80 11 chr10 102713673 102713860 -37602905 + L2 LINE L2 3114 3313 0 1627 116 119 7 chr10 102713938 102714215 -37602550 - AluSg1 SINE Alu -1 308 1 2011 209 38 4 chr10 102714234 102714703 -37602062 - L1PA13 LINE L1 -4702 2085 1601 1103 274 7 11 chr10 102714748 102715033 -37601732 - L1PA13 LINE L1 -5181 1606 1323 436 253 213 13 chr10 102715631 102715781 -37600984 + L1M3 LINE L1 5627 5806 -377 416 231 92 8 chr10 102715870 102716000 -37600765 - MIR SINE MIR 0 262 122 1851 134 28 3 chr10 102716000 102716291 -37600474 + AluSg SINE Alu 1 298 -12 368 213 21 21 chr10 102716420 102716514 -37600251 + L3 LINE CR1 1403 1496 -81 198 71 0 0 chr10 102716614 102716642 -37600123 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 200 275 0 0 chr10 102716642 102716682 -37600083 + polypurine Low_complexity Low_complexity 6 45 0 1436 201 5 104 chr10 102716994 102717038 -37599727 + MLT1A2 LTR MaLR 4 51 -323 1804 184 50 81 chr10 102717038 102717603 -37599162 - LTR10B LTR ERV1 0 547 1 1436 201 5 104 chr10 102717603 102717970 -37598795 + MLT1A2 LTR MaLR 51 374 0 577 280 85 5 chr10 102718005 102718194 -37598571 + MIR SINE MIR 51 254 -8 6017 58 37 13 chr10 102718234 102718996 -37597769 + LTR17 LTR ERV1 1 780 0 2101 128 0 0 chr10 102720139 102720444 -37596321 - AluSx SINE Alu -7 305 1 1545 90 14 5 chr10 102720481 102720693 -37596072 + AluSc SINE Alu 1 214 -95 381 319 81 1 chr10 102721128 102721317 -37595448 + MIR SINE MIR 41 248 -14 514 213 0 0 chr10 102721331 102721425 -37595340 + L1MD2 LINE L1 6049 6142 -217 195 42 0 0 chr10 102721513 102721537 -37595228 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 241 259 28 21 chr10 102721803 102721946 -37594819 + (CACCC)n Simple_repeat Simple_repeat 3 146 0 279 206 33 43 chr10 102722768 102722860 -37593905 + L1ME LINE L1 5490 5580 -541 190 283 113 28 chr10 102722998 102723104 -37593661 + MIR SINE MIR 68 182 -80 1583 200 136 38 chr10 102725946 102726520 -37590245 - L1MC5 LINE L1 -33 7928 7299 2180 99 0 0 chr10 102726580 102726872 -37589893 - AluY SINE Alu -11 300 9 2067 112 76 22 chr10 102726893 102727249 -37589516 - THE1C LTR MaLR 0 375 1 216 309 82 10 chr10 102727266 102727363 -37589402 - L2 LINE L2 -609 2705 2602 308 234 65 13 chr10 102728573 102728650 -37588115 + MIR SINE MIR 67 147 -115 2399 71 3 0 chr10 102728668 102728978 -37587787 + AluY SINE Alu 1 311 0 252 196 98 0 chr10 102729241 102729292 -37587473 + MLT1F1 LTR MaLR 1 56 -486 403 240 18 13 chr10 102729510 102729620 -37587145 + MLT1F1 LTR MaLR 63 181 -380 5024 162 59 9 chr10 102729626 102730818 -37585947 + L1MB7 LINE L1 4942 6179 -5 1941 139 7 3 chr10 102730826 102731136 -37585629 - AluSx SINE Alu -1 311 1 44 0 0 0 chr10 102731167 102731211 -37585554 + AT_rich Low_complexity Low_complexity 1 44 0 1442 211 150 3 chr10 102731356 102731702 -37585063 + MLT1F1 LTR MaLR 163 559 -8 246 32 0 0 chr10 102732267 102732298 -37584467 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1700 164 0 0 chr10 102732298 102732578 -37584187 - AluJb SINE Alu -32 280 1 221 292 85 15 chr10 102732582 102732637 -37584128 - MIR SINE MIR -88 174 124 4233 61 94 62 chr10 102732637 102732948 -37583817 + PABL_A LTR ERV1 1 301 -359 2075 85 0 39 chr10 102732948 102733254 -37583511 + AluY SINE Alu 1 294 -17 4233 61 94 62 chr10 102733254 102733582 -37583183 + PABL_A LTR ERV1 301 660 0 221 292 85 15 chr10 102733582 102733656 -37583109 - MIR SINE MIR -138 124 36 416 273 176 6 chr10 102734975 102735151 -37581614 - MIR SINE MIR -6 256 51 209 56 0 28 chr10 102735569 102735605 -37581160 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 208 353 0 20 chr10 102736740 102736842 -37579923 + GA-rich Low_complexity Low_complexity 4 103 0 320 344 108 2 chr10 102736848 102737043 -37579722 - MIR SINE MIR -30 232 20 268 311 0 22 chr10 102737128 102737218 -37579547 - LTR67 LTR ERVL -13 544 457 318 292 70 41 chr10 102737837 102738008 -37578757 + MIR SINE MIR 21 196 -66 259 208 75 0 chr10 102739035 102739088 -37577677 + L2 LINE L2 3208 3264 -49 2122 110 10 7 chr10 102740465 102740775 -37575990 + AluSx SINE Alu 1 311 -1 1256 205 113 59 chr10 102742143 102742413 -37574352 - MLT1C LTR MaLR 0 467 162 351 0 0 0 chr10 102742413 102742452 -37574313 + (TG)n Simple_repeat Simple_repeat 2 40 0 1256 205 113 59 chr10 102742452 102742624 -37574141 - MLT1C LTR MaLR -305 162 1 297 229 0 0 chr10 102742782 102742843 -37573922 + MIR SINE MIR 85 145 -63 517 223 11 0 chr10 102743423 102743517 -37573248 + MER81 DNA DNA 20 114 0 596 300 69 30 chr10 102746526 102746759 -37570006 + MIR SINE MIR 21 262 0 266 306 93 9 chr10 102747558 102747666 -37569099 - MIR SINE MIR -109 153 37 1322 248 143 17 chr10 102747854 102748381 -37568384 - MLT1E LTR MaLR 0 593 1 202 345 0 0 chr10 102748381 102748439 -37568326 + CT-rich Low_complexity Low_complexity 2 59 0 1833 260 45 16 chr10 102748532 102748724 -37568041 - L1ME3A LINE L1 0 6170 5985 1720 174 17 0 chr10 102748724 102749011 -37567754 - AluJo SINE Alu -20 292 1 1833 260 45 16 chr10 102749011 102749371 -37567394 - L1ME3A LINE L1 -185 5985 5602 219 189 0 38 chr10 102750184 102750237 -37566528 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 622 296 34 9 chr10 102750573 102750806 -37565959 - L1ME4a LINE L1 -293 5828 5590 315 333 62 7 chr10 102750895 102751039 -37565726 - L1ME4a LINE L1 -2338 5470 5319 509 230 37 0 chr10 102751948 102752083 -37564682 + L1ME4a LINE L1 5770 5909 -212 387 303 78 14 chr10 102752105 102752247 -37564518 + L1ME4a LINE L1 5969 6119 -2 2117 113 0 28 chr10 102752259 102752578 -37564187 - AluSg SINE Alu 0 310 1 435 235 7 13 chr10 102752647 102752800 -37563965 + CT-rich Low_complexity Low_complexity 1 152 0 191 345 48 12 chr10 102753074 102753158 -37563607 - MIR SINE MIR -8 254 168 1924 122 14 4 chr10 102753789 102754087 -37562678 - AluSx SINE Alu 0 301 1 1552 152 8 8 chr10 102754972 102755236 -37561529 + AluJb SINE Alu 21 284 -28 354 203 13 0 chr10 102756528 102756607 -37560158 - Charlie5 DNA MER1_type 0 2624 2545 1663 164 7 17 chr10 102756611 102756909 -37559856 + AluJb SINE Alu 1 295 -17 378 129 0 0 chr10 102756909 102756971 -37559794 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 853 148 102 0 chr10 102756971 102757147 -37559618 - Charlie5 DNA MER1_type -95 2517 2324 1278 164 17 17 chr10 102757153 102757385 -37559380 - AluJo SINE Alu 0 312 81 288 278 11 0 chr10 102757978 102758068 -37558697 + L1MB7 LINE L1 6076 6166 -18 2270 91 3 7 chr10 102758241 102758550 -37558215 - AluSx SINE Alu -4 308 1 417 300 117 22 chr10 102758554 102758784 -37557981 + L2 LINE L2 2941 3192 -80 1192 250 164 8 chr10 102759725 102760364 -37556401 + L2 LINE L2 2310 3066 -247 200 312 55 28 chr10 102761760 102761869 -37554896 + L2 LINE L2 2949 3060 -212 584 241 104 120 chr10 102762171 102762595 -37554170 + MLT1H LTR MaLR 4 420 -129 318 226 172 0 chr10 102762788 102762881 -37553884 + MIR SINE MIR 31 139 -69 435 317 148 37 chr10 102763836 102764831 -37551934 + L2 LINE L2 2132 3272 0 333 0 0 0 chr10 102765160 102765197 -37551568 + (CA)n Simple_repeat Simple_repeat 2 38 0 229 196 0 22 chr10 102765411 102765457 -37551308 + GA-rich Low_complexity Low_complexity 1 45 0 370 316 30 15 chr10 102765511 102765644 -37551121 + MIR SINE MIR 2 136 -126 479 282 106 9 chr10 102766177 102766404 -37550361 + MIR SINE MIR 14 262 0 317 311 66 0 chr10 102766528 102766634 -37550131 + L2 LINE L2 3149 3261 -11 383 275 80 88 chr10 102766715 102767079 -37549686 + MLT1H LTR MaLR 46 406 -143 355 311 19 0 chr10 102767137 102767240 -37549525 - MER117 DNA MER1_type -3 194 90 633 367 39 17 chr10 102767434 102767794 -37548971 + LTR16C LTR ERVL 122 489 -2 2361 85 0 0 chr10 102768487 102768793 -37547972 - AluSx SINE Alu 0 312 7 182 211 39 39 chr10 102769404 102769456 -37547309 + MER5B DNA MER1_type 3 54 -124 1911 151 0 16 chr10 102769470 102769787 -37546978 + AluJb SINE Alu 1 312 0 245 213 0 0 chr10 102769793 102769840 -37546925 - MER5B DNA MER1_type -131 47 1 653 193 17 11 chr10 102771100 102771276 -37545489 + (CATAC)n Simple_repeat Simple_repeat 4 180 0 443 315 120 5 chr10 102771293 102771359 -37545406 - MIR SINE MIR -23 239 182 6300 146 85 11 chr10 102771359 102771588 -37545177 - Tigger3b DNA MER2_type -1797 1231 1020 2200 104 0 7 chr10 102771588 102771897 -37544868 + AluSg SINE Alu 1 307 -3 6300 146 85 11 chr10 102771897 102772813 -37543952 - Tigger3b DNA MER2_type -2008 1020 1 443 315 120 5 chr10 102772813 102772946 -37543819 - MIR SINE MIR -80 182 17 773 278 177 6 chr10 102773223 102773550 -37543215 + L2 LINE L2 2931 3313 0 230 347 182 9 chr10 102773567 102773792 -37542973 + L3 LINE CR1 1300 1563 -14 401 252 263 41 chr10 102774163 102774528 -37542237 + L2 LINE L2 2868 3313 0 2443 180 5 0 chr10 102774669 102775070 -37541695 + MER57A LTR ERV1 1 403 0 248 274 29 20 chr10 102775349 102775451 -37541314 + MER5A DNA MER1_type 3 105 -84 254 200 0 18 chr10 102776056 102776111 -37540654 + MIR SINE MIR 109 162 -100 * 366 296 87 11 chr10 102776096 102776307 -37540458 - MIR SINE MIR 0 262 2 255 250 181 17 chr10 102776408 102776524 -37540241 + MIR SINE MIR 9 143 -119 400 287 147 0 chr10 102776647 102776790 -37539975 - L3 LINE CR1 -431 1146 983 2256 82 3 3 chr10 102777227 102777531 -37539234 + AluY SINE Alu 1 304 -7 465 255 12 81 chr10 102779068 102779229 -37537536 + MIR SINE MIR 101 250 -12 668 273 73 5 chr10 102779433 102779638 -37537127 - MIR SINE MIR -27 235 17 1493 253 44 7 chr10 102779660 102780178 -37536587 + MER90 LTR ERV1 1 607 -7 302 273 238 6 chr10 102780216 102780388 -37536377 - MIR SINE MIR 0 262 51 2105 113 0 0 chr10 102780412 102780728 -37536037 + AluSq SINE Alu 1 316 0 228 302 42 21 chr10 102782292 102782388 -37534377 - MER5A DNA MER1_type -1 188 91 232 267 61 46 chr10 102782585 102782716 -37534049 + MIR SINE MIR 18 150 -58 180 242 145 0 chr10 102783114 102783176 -37533589 - MER5A DNA MER1_type -69 120 50 * 222 302 16 0 chr10 102783136 102783199 -37533566 + MER5A DNA MER1_type 110 173 -16 2758 209 95 25 chr10 102783518 102784050 -37532715 - MER63C DNA MER1_type -131 929 318 2241 75 0 14 chr10 102784050 102784377 -37532388 + AluSg SINE Alu 1 310 0 2758 209 95 25 chr10 102784377 102784668 -37532097 - MER63C DNA MER1_type -742 318 49 240 163 0 0 chr10 102784673 102784716 -37532049 + (TA)n Simple_repeat Simple_repeat 1 43 0 279 256 0 64 chr10 102784716 102784794 -37531971 - MER63C DNA MER1_type -857 73 1 296 275 123 14 chr10 102785320 102785458 -37531307 - MIR3 SINE MIR -23 185 33 216 219 53 0 chr10 102786024 102786108 -37530657 - MIR3 SINE MIR -18 190 100 200 303 135 0 chr10 102787425 102787514 -37529251 + MER5B DNA MER1_type 3 103 -75 264 216 425 0 chr10 102787646 102787799 -37528966 - MIR SINE MIR 0 262 45 190 300 200 0 chr10 102788954 102789044 -37527721 + MIR SINE MIR 60 167 -95 216 238 12 38 chr10 102789962 102790042 -37526723 + GA-rich Low_complexity Low_complexity 1 78 0 2028 140 0 7 chr10 102791054 102791362 -37525403 + AluJo SINE Alu 7 312 0 1365 249 25 8 chr10 102791833 102792191 -37524574 + L1ME4a LINE L1 5559 5922 -199 573 311 56 0 chr10 102792320 102792500 -37524265 - MIR SINE MIR -27 235 46 417 20 0 0 chr10 102792583 102792633 -37524132 + (CA)n Simple_repeat Simple_repeat 2 51 0 217 182 45 0 chr10 102792816 102792860 -37523905 - L2 LINE L2 -6 3307 3262 286 234 112 28 chr10 102793759 102793866 -37522899 + MER103 DNA DNA 9 124 -42 374 317 19 0 chr10 102795832 102795936 -37520829 + MIR SINE MIR 48 153 -109 377 210 123 49 chr10 102797278 102797363 -37519402 + L1ME4a LINE L1 5861 5938 -183 306 0 0 0 chr10 102797363 102797397 -37519368 + (TG)n Simple_repeat Simple_repeat 2 35 0 377 210 123 49 chr10 102797397 102797554 -37519211 + L1ME4a LINE L1 5938 6121 0 268 179 0 71 chr10 102798297 102798353 -37518412 - L2 LINE L2 0 3272 3221 829 203 18 6 chr10 102798864 102799027 -37517738 + MER5B DNA MER1_type 1 165 -13 396 221 229 14 chr10 102799061 102799201 -37517564 - MER5B DNA MER1_type 0 178 9 2357 74 0 0 chr10 102799456 102799754 -37517011 - AluSx SINE Alu -9 303 6 24 53 0 0 chr10 102799867 102799905 -37516860 + AT_rich Low_complexity Low_complexity 1 38 0 554 329 59 8 chr10 102800768 102801005 -37515760 - MIR SINE MIR -8 254 6 226 362 72 58 chr10 102802011 102802356 -37514409 - L2 LINE L2 -45 3268 2919 1396 193 40 11 chr10 102802369 102802696 -37514069 - MER33 DNA MER1_type -2 322 1 321 346 23 15 chr10 102802705 102802835 -37513930 - L2 LINE L2 -420 2894 2764 381 313 77 73 chr10 102802844 102803090 -37513675 + L2 LINE L2 3026 3272 0 860 250 32 51 chr10 102803109 102803481 -37513284 - L1MEd LINE L1 -5089 1030 666 868 198 5 69 chr10 102803493 102803570 -37513195 + MER5A DNA MER1_type 1 81 -108 2357 76 3 0 chr10 102803570 102803871 -37512894 + AluSg SINE Alu 1 302 -8 868 198 5 69 chr10 102803871 102803995 -37512770 + MER5A DNA MER1_type 81 189 0 25 31 0 0 chr10 102804062 102804094 -37512671 + AT_rich Low_complexity Low_complexity 1 32 0 511 314 47 12 chr10 102805595 102805767 -37510998 + MIR3 SINE MIR 20 197 -11 755 268 73 17 chr10 102806690 102806992 -37509773 + L1ME4a LINE L1 5565 5883 -238 303 234 85 35 chr10 102807028 102807169 -37509596 + L1ME4a LINE L1 5962 6109 -12 535 276 143 31 chr10 102807597 102807883 -37508882 + L2 LINE L2 2992 3309 -4 1851 185 32 18 chr10 102808035 102808376 -37508389 + MER7A DNA MER2_type 2 345 -1 2071 133 23 47 chr10 102808419 102808803 -37507962 + THE1C LTR MaLR 1 375 0 10370 117 21 31 chr10 102808803 102810400 -37506365 + THE1C-int LTR MaLR 1 1580 0 2202 118 26 47 chr10 102810400 102810783 -37505982 + THE1C LTR MaLR 1 375 0 643 237 83 59 chr10 102810871 102811329 -37505436 + L1ME4a LINE L1 5615 6120 -1 27 29 0 0 chr10 102811512 102811546 -37505219 + AT_rich Low_complexity Low_complexity 1 34 0 3194 189 90 26 chr10 102811930 102813112 -37503653 + L1ME1 LINE L1 4924 6312 0 1751 142 45 7 chr10 102813137 102813425 -37503340 - AluJb SINE Alu -13 299 1 259 299 244 15 chr10 102813947 102814148 -37502617 - MIR SINE MIR -10 252 6 2221 69 0 14 chr10 102814368 102814693 -37502072 + AluSx SINE Alu 1 321 0 258 248 97 18 chr10 102817302 102817415 -37499350 - MIR3 SINE MIR -54 154 33 416 244 157 9 chr10 102817661 102817776 -37498989 - MIR3 SINE MIR -62 146 15 1243 169 87 20 chr10 102818444 102818876 -37497889 - L1M4 LINE L1 -631 5553 5099 2060 144 23 49 chr10 102818886 102819066 -37497699 - L1MB3 LINE L1 0 6183 6000 1839 131 4 0 chr10 102819066 102819340 -37497425 + AluSg SINE Alu 1 275 -35 231 61 0 0 chr10 102819345 102819378 -37497387 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2060 144 23 49 chr10 102819378 102819622 -37497143 - L1MB3 LINE L1 -187 5996 5764 21 0 0 0 chr10 102820005 102820026 -37496739 + AT_rich Low_complexity Low_complexity 1 21 0 1248 271 94 22 chr10 102820225 102820361 -37496404 - L1MEc LINE L1 -3171 3044 2919 467 17 17 0 chr10 102820361 102820421 -37496344 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1248 271 94 22 chr10 102820421 102821418 -37495347 - L1MEc LINE L1 -3296 2919 1877 402 246 27 27 chr10 102822074 102822184 -37494581 - MIR3 SINE MIR -4 204 95 501 231 14 56 chr10 102822789 102822932 -37493833 + MLT1J1 LTR MaLR 310 446 0 2418 67 0 3 chr10 102823887 102824199 -37492566 + AluY SINE Alu 1 311 0 330 262 112 70 chr10 102824470 102824657 -37492108 + MIR SINE MIR 7 201 -61 264 280 121 30 chr10 102826481 102826613 -37490152 + MIR SINE MIR 40 183 -79 624 207 124 74 chr10 102829520 102829737 -37487028 - MIR SINE MIR -4 258 31 1520 163 75 18 chr10 102830023 102830305 -37486460 + AluJo SINE Alu 1 298 -14 230 294 15 15 chr10 102831336 102831404 -37485361 + L2 LINE L2 2689 2756 -558 248 326 11 34 chr10 102831657 102831746 -37485019 + MIR SINE MIR 54 140 -122 2213 115 0 0 chr10 102831828 102832157 -37484608 - AluSx SINE Alu 0 329 1 502 320 84 71 chr10 102832196 102832947 -37483818 + L2 LINE L2 1929 2689 -625 1851 144 0 10 chr10 102833198 102833497 -37483268 + AluJo SINE Alu 1 296 -16 2230 102 3 0 chr10 102833515 102833820 -37482945 + AluSg SINE Alu 1 306 -4 367 330 172 35 chr10 102834089 102834374 -37482391 + L2 LINE L2 2949 3272 0 633 281 59 20 chr10 102834902 102835105 -37481660 - MIR SINE MIR 0 262 52 343 325 44 0 chr10 102835178 102835292 -37481473 - MIR SINE MIR -98 164 46 2369 78 3 0 chr10 102836010 102836316 -37480449 + AluSg SINE Alu 1 307 -3 385 239 43 11 chr10 102836333 102836425 -37480340 + MIR3 SINE MIR 89 183 -25 259 273 67 80 chr10 102836490 102836824 -37479941 + L2 LINE L2 2686 3014 -258 194 353 66 8 chr10 102837040 102837162 -37479603 + MIR SINE MIR 20 148 -60 238 178 0 22 chr10 102837163 102837208 -37479557 + G-rich Low_complexity Low_complexity 4 47 0 222 37 0 0 chr10 102839781 102839808 -37476957 + (TG)n Simple_repeat Simple_repeat 1 27 0 1083 134 23 0 chr10 102840908 102841080 -37475685 - MER5B DNA MER1_type 0 178 3 220 216 0 0 chr10 102841854 102841905 -37474860 + (TA)n Simple_repeat Simple_repeat 2 52 0 376 318 121 34 chr10 102842292 102842556 -37474209 + L1ME LINE L1 4956 5242 -904 345 249 132 15 chr10 102842598 102842795 -37473970 + L1ME LINE L1 5285 5504 -617 2273 105 0 0 chr10 102842882 102843187 -37473578 + AluSx SINE Alu 1 305 -7 255 170 0 0 chr10 102843190 102843237 -37473528 + GA-rich Low_complexity Low_complexity 2 48 0 602 317 175 19 chr10 102843290 102843599 -37473166 + L3 LINE CR1 1151 1507 -70 2292 64 3 10 chr10 102844800 102845098 -37471667 - AluY SINE Alu -15 296 1 5609 21 3 0 chr10 102845532 102846163 -37470602 + L1PA3 LINE L1 5522 6154 -1 1914 142 3 0 chr10 102846188 102846477 -37470288 + AluSx SINE Alu 1 290 -22 334 256 58 0 chr10 102846499 102846585 -37470180 + L3b LINE CR1 1171 1261 -322 506 236 49 63 chr10 102846711 102846908 -37469857 + MIR3 SINE MIR 12 197 -59 2235 114 49 12 chr10 102847426 102847751 -37469014 + MER1B DNA MER1_type 1 337 0 632 315 161 22 chr10 102848099 102848502 -37468263 - L3 LINE CR1 -3 1574 1116 339 276 51 20 chr10 102849352 102849450 -37467315 - MIR SINE MIR -87 121 21 2053 114 24 7 chr10 102849773 102850063 -37466702 - AluSx SINE Alu -17 295 1 227 225 0 0 chr10 102850539 102850579 -37466186 - L2 LINE L2 -11 3302 3263 * 561 231 219 0 chr10 102850545 102850714 -37466051 - MIR SINE MIR -11 251 46 477 289 26 26 chr10 102850944 102851100 -37465665 - MIR3 SINE MIR -15 193 38 209 304 116 43 chr10 102851668 102851806 -37464959 - MIR3 SINE MIR -3 205 58 437 283 83 0 chr10 102851949 102852094 -37464671 + MER20 DNA MER1_type 62 218 -1 362 248 75 0 chr10 102852739 102852872 -37463893 - L1ME4a LINE L1 -13 6108 5966 314 257 186 42 chr10 102852961 102853198 -37463567 - L1ME4a LINE L1 -237 5884 5614 1176 273 79 19 chr10 102853219 102853585 -37463180 + MLT1I LTR MaLR 22 409 0 501 285 72 21 chr10 102853613 102853848 -37462917 - L1ME4a LINE L1 -552 5569 5323 536 117 21 0 chr10 102853848 102853942 -37462823 + CT-rich Low_complexity Low_complexity 3 98 0 2100 79 4 0 chr10 102853947 102854212 -37462553 - AluSx SINE Alu -44 268 3 303 251 134 56 chr10 102854217 102854396 -37462369 - L1ME4a LINE L1 -840 5306 5114 230 310 28 69 chr10 102854815 102854960 -37461805 - MER5A DNA MER1_type -45 144 6 499 271 117 16 chr10 102856982 102857170 -37459595 + L3 LINE CR1 1363 1569 -8 280 333 83 0 chr10 102858021 102858129 -37458636 - L2 LINE L2 -1 3271 3155 185 299 86 34 chr10 102858849 102858966 -37457799 - L3 LINE CR1 -147 1430 1308 218 217 0 0 chr10 102859428 102859474 -37457291 + L2 LINE L2 3268 3313 0 270 0 0 0 chr10 102859937 102859967 -37456798 + (CA)n Simple_repeat Simple_repeat 2 31 0 230 267 142 42 chr10 102861298 102861418 -37455347 - MIR SINE MIR -65 197 66 2556 53 0 0 chr10 102861904 102862206 -37454559 + AluY SINE Alu 10 311 0 2477 125 28 0 chr10 102862475 102862874 -37453891 - L1MB3 LINE L1 0 6183 5774 13853 155 26 33 chr10 102862877 102863762 -37453003 - L1M4 LINE L1 -3399 2983 2093 4775 53 3 2 chr10 102863762 102864349 -37452416 - LTR10C LTR ERV1 -3 588 1 13853 155 26 33 chr10 102864349 102866443 -37450322 - L1M4 LINE L1 -4289 2093 19 21 57 0 0 chr10 102866679 102866714 -37450051 + AT_rich Low_complexity Low_complexity 1 35 0 1372 151 0 0 chr10 102866836 102867041 -37449724 - MER6B DNA MER2_type -1 209 5 377 249 52 3 chr10 102867276 102867414 -37449351 - L1MA4 LINE L1 -6 6299 6156 749 237 11 0 chr10 102867753 102867943 -37448822 + L1PB1 LINE L1 6 197 -6666 * 15003 180 18 18 chr10 102867940 102872597 -37444168 + L1PB1 LINE L1 1392 6091 -776 2341 106 0 0 chr10 102872597 102872909 -37443856 + AluSq SINE Alu 1 312 -1 15003 180 18 18 chr10 102872909 102873683 -37443082 + L1PB1 LINE L1 6091 6864 -3 2293 92 0 13 chr10 102874172 102874475 -37442290 + AluY SINE Alu 1 299 -12 702 280 37 3 chr10 102874616 102874865 -37441900 - L1ME3 LINE L1 -255 5907 5647 587 264 52 6 chr10 102874865 102875039 -37441726 + MER5A DNA MER1_type 2 183 -6 503 245 15 66 chr10 102875045 102875241 -37441524 - L1ME3 LINE L1 -514 5652 5467 830 290 95 27 chr10 102875243 102875799 -37440966 - L1ME3 LINE L1 -1036 5110 4517 1590 170 0 58 chr10 102876101 102876431 -37440334 - AluJo SINE Alu -1 311 1 224 185 19 0 chr10 102877405 102877459 -37439306 + CT-rich Low_complexity Low_complexity 1 55 0 198 287 103 0 chr10 102878057 102878144 -37438621 + L2 LINE L2 3150 3245 -27 630 334 112 41 chr10 102878171 102878706 -37438059 - L2 LINE L2 -87 3226 2618 2088 107 14 0 chr10 102878706 102878995 -37437770 + AluSc SINE Alu 6 298 -11 630 334 112 41 chr10 102878995 102879161 -37437604 - L2 LINE L2 -695 2618 2465 431 137 0 0 chr10 102879165 102879238 -37437527 - AluS SINE Alu -8 301 229 231 36 0 0 chr10 102879504 102879532 -37437233 + (CA)n Simple_repeat Simple_repeat 2 29 0 1033 316 68 24 chr10 102879792 102880203 -37436562 + MER115 DNA AcHobo 42 470 -223 268 172 35 92 chr10 102880246 102880333 -37436432 - L2 LINE L2 -5 3267 3186 231 275 14 14 chr10 102880593 102880662 -37436103 + MIR SINE MIR 180 248 -14 2243 117 0 0 chr10 102880691 102880999 -37435766 - AluY SINE Alu -3 308 1 27 0 0 0 chr10 102881014 102881041 -37435724 + AT_rich Low_complexity Low_complexity 1 27 0 513 71 0 0 chr10 102881105 102881175 -37435590 + (TG)n Simple_repeat Simple_repeat 2 71 0 190 244 326 0 chr10 102881201 102881287 -37435478 + L2 LINE L2 3200 3313 0 320 200 0 0 chr10 102881534 102881589 -37435176 + Tigger5 DNA MER2_type 1 55 -2268 366 244 12 0 chr10 102881599 102881685 -37435080 + Tigger5 DNA MER2_type 2237 2323 0 1364 225 84 22 chr10 102881686 102882073 -37434692 + L1M4 LINE L1 2854 3286 -2860 357 109 0 0 chr10 102882073 102882128 -37434637 + (CA)n Simple_repeat Simple_repeat 2 56 0 1364 225 84 22 chr10 102882128 102882287 -37434478 + L1M4 LINE L1 3286 3434 -2712 1604 193 86 5 chr10 102882291 102882700 -37434065 + L1MB8 LINE L1 5695 6136 -42 597 204 71 46 chr10 102882983 102883179 -37433586 + L1MC5 LINE L1 7709 7909 -52 489 156 44 88 chr10 102883216 102883376 -37433389 + L1MA8 LINE L1 6127 6279 -12 392 340 62 39 chr10 102883424 102883730 -37433035 + HAL1b LINE L1 351 663 -685 1029 186 8 64 chr10 102884200 102884436 -37432329 + THE1A LTR MaLR 127 349 -6 23 33 0 0 chr10 102884645 102884675 -37432090 + AT_rich Low_complexity Low_complexity 1 30 0 1104 79 0 0 chr10 102885357 102885496 -37431269 + L1PA7 LINE L1 6 144 -6317 857 147 0 0 chr10 102885501 102885630 -37431135 - L1P3 LINE L1 -6184 277 149 * 8089 82 11 4 chr10 102885626 102887532 -37429233 + L1PA7 LINE L1 4553 6469 0 1827 184 10 0 chr10 102888216 102888525 -37428240 - AluJo SINE Alu 0 312 1 30 69 0 0 chr10 102889112 102889170 -37427595 + AT_rich Low_complexity Low_complexity 1 58 0 387 60 0 0 chr10 102890822 102890872 -37425893 + (CA)n Simple_repeat Simple_repeat 2 51 0 716 189 0 129 chr10 102890885 102891018 -37425747 - MER45A DNA AcHobo -1403 178 78 2317 98 7 0 chr10 102891018 102891324 -37425441 - AluSg SINE Alu -2 308 1 716 189 0 129 chr10 102891324 102891391 -37425374 - MER45A DNA AcHobo -1503 78 4 631 215 20 7 chr10 102891393 102891542 -37425223 + MER103 DNA DNA 9 159 -7 2318 74 3 0 chr10 102892299 102892626 -37424139 + AluSp SINE Alu 1 328 0 394 280 149 24 chr10 102892646 102892814 -37423951 + Charlie8 DNA MER1_type 1 189 -2228 2392 91 0 0 chr10 102892975 102893284 -37423481 + AluY SINE Alu 2 310 -1 380 264 66 13 chr10 102893855 102894051 -37422714 + Charlie6 DNA MER1_type 1 268 -3232 * 3180 196 77 58 chr10 102894048 102895119 -37421646 + Charlie6 DNA MER1_type 2371 3461 -39 2071 115 3 24 chr10 102896070 102896365 -37420400 + AluSq SINE Alu 1 289 -24 273 228 0 0 chr10 102897326 102897383 -37419382 - L2 LINE L2 0 3313 3257 235 264 11 44 chr10 102897428 102897519 -37419246 - L1MC4 LINE L1 -1340 6702 6615 276 221 0 0 chr10 102897520 102897597 -37419168 + (TA)n Simple_repeat Simple_repeat 2 78 0 2221 105 22 0 chr10 102897629 102897944 -37418821 + MER47A DNA MER2_type 45 366 0 207 64 43 21 chr10 102897955 102898002 -37418763 + (TA)n Simple_repeat Simple_repeat 1 48 0 2368 264 57 21 chr10 102898091 102898941 -37417824 - L2 LINE L2 -189 3124 2239 309 281 37 92 chr10 102900608 102900772 -37415993 + HAL1b LINE L1 752 906 -442 2823 143 6 23 chr10 102900775 102901287 -37415478 + L1MA8 LINE L1 5674 6176 -115 2044 132 14 9 chr10 102901287 102901635 -37415130 + L1MB4 LINE L1 5476 5825 -355 * 15950 217 17 25 chr10 102901633 102903808 -37412957 + L1PA15 LINE L1 1343 3535 -3281 2112 138 0 0 chr10 102903808 102904112 -37412653 + AluSc SINE Alu 1 304 -5 15950 217 17 25 chr10 102904112 102906915 -37409850 + L1PA15 LINE L1 3535 6280 -536 857 214 28 5 chr10 102907016 102907231 -37409534 + L1PA15 LINE L1 6593 6812 -4 8490 181 24 34 chr10 102907236 102909406 -37407359 - L1M4 LINE L1 -1062 5084 2995 378 330 46 66 chr10 102909502 102909805 -37406960 + L1MDa LINE L1 34 330 -6210 231 36 0 0 chr10 102909846 102909874 -37406891 + (TCCCC)n Simple_repeat Simple_repeat 5 32 0 201 213 0 0 chr10 102909977 102910024 -37406741 + CT-rich Low_complexity Low_complexity 2 48 0 2060 224 90 123 chr10 102910598 102912532 -37404233 + L1MDa LINE L1 945 2941 -3599 2023 85 0 44 chr10 102912532 102912825 -37403940 + AluSx SINE Alu 1 280 -32 183 42 0 0 chr10 102912830 102912854 -37403911 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2060 224 90 123 chr10 102912854 102913512 -37403253 + L1MDa LINE L1 2945 3426 -3114 1948 93 0 19 chr10 102913518 102913775 -37402990 + AluSg SINE Alu 1 252 -58 9208 27 7 0 chr10 102913875 102915146 -37401619 - L1P1 LINE L1 -594 5561 4286 * 14266 39 4 73 chr10 102915137 102917223 -37399542 + L1P1 LINE L1 2325 4265 -1881 1712 210 88 23 chr10 102917532 102917966 -37398799 - MLT1C LTR MaLR 0 467 6 234 0 0 0 chr10 102918491 102918517 -37398248 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 24 32 0 0 chr10 102918722 102918753 -37398012 + AT_rich Low_complexity Low_complexity 1 31 0 808 308 49 21 chr10 102919162 102919688 -37397077 - L1ME4a LINE L1 -177 5944 5404 2079 118 0 0 chr10 102920055 102920335 -37396430 - AluSx SINE Alu -10 302 23 243 88 0 0 chr10 102920340 102920374 -37396391 + (T)n Simple_repeat Simple_repeat 1 34 0 341 286 187 18 chr10 102920700 102920871 -37395894 + L2 LINE L2 3110 3309 -4 3428 110 26 9 chr10 102921113 102921659 -37395106 - L1MA4 LINE L1 -125 6175 5621 272 357 23 31 chr10 102921692 102921821 -37394944 + L2 LINE L2 3133 3260 -12 3180 146 117 0 chr10 102922215 102922762 -37394003 + Tigger1 DNA MER2_type 30 640 -1778 7265 109 13 38 chr10 102922863 102923207 -37393558 + Tigger1 DNA MER2_type 1286 1637 -781 723 41 0 31 chr10 102923207 102923333 -37393432 - L1PA2 LINE L1 0 6155 6056 7265 109 13 38 chr10 102923333 102924150 -37392615 + Tigger1 DNA MER2_type 1637 2418 0 374 340 47 39 chr10 102924151 102924407 -37392358 + HAL1 LINE L1 836 1093 -1414 4252 179 45 16 chr10 102924420 102925481 -37391284 + L1MB8 LINE L1 5077 6168 -10 282 293 43 43 chr10 102925634 102925798 -37390967 + HAL1b LINE L1 743 906 -442 549 211 106 0 chr10 102925971 102926113 -37390652 + MER103 DNA DNA 3 159 -7 660 340 15 33 chr10 102926266 102926595 -37390170 + L2 LINE L2 2606 2928 -386 527 207 131 7 chr10 102926697 102926842 -37389923 + L2 LINE L2 3150 3312 -1 557 152 48 0 chr10 102927256 102927361 -37389404 + ORSL DNA AcHobo 1 110 -165 505 294 11 37 chr10 102927686 102927873 -37388892 + MER5A DNA MER1_type 7 188 -1 189 316 10 61 chr10 102927873 102927965 -37388800 - MIR SINE MIR -90 172 86 212 364 99 0 chr10 102927987 102928108 -37388657 - MIR SINE MIR -6 256 124 5109 175 21 1 chr10 102928229 102929188 -37387577 - L1 LINE L1 -1882 5683 4706 280 159 58 0 chr10 102929199 102929337 -37387428 + (TA)n Simple_repeat Simple_repeat 1 146 0 1796 167 3 3 chr10 102929337 102929625 -37387140 - AluJo SINE Alu -24 288 1 17701 156 24 95 chr10 102929633 102932011 -37384754 - L1 LINE L1 -2865 4700 2654 1302 92 36 0 chr10 102932011 102932206 -37384559 - AluY SINE Alu -109 202 1 17701 156 24 95 chr10 102932206 102934676 -37382089 - L1 LINE L1 -4911 2654 12 549 125 0 0 chr10 102934676 102934764 -37382001 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 234 81 0 0 chr10 102934882 102934919 -37381846 + (A)n Simple_repeat Simple_repeat 1 37 0 216 0 0 0 chr10 102934923 102934947 -37381818 + (TCCCC)n Simple_repeat Simple_repeat 2 25 0 1126 215 131 30 chr10 102935140 102935367 -37381398 + L1MC4 LINE L1 7387 7590 -452 2069 132 0 13 chr10 102935367 102935670 -37381095 + AluSx SINE Alu 1 299 -13 1126 215 131 30 chr10 102935670 102935838 -37380927 + L1MC4 LINE L1 7590 7822 -220 749 303 62 69 chr10 102935942 102936467 -37380298 + L2 LINE L2 2804 3313 0 2076 132 42 72 chr10 102939110 102939566 -37377199 - L1MA7 LINE L1 0 6291 5850 1185 160 19 5 chr10 102939556 102939762 -37377003 + L1MA7 LINE L1 5627 5835 -456 * 749 181 32 27 chr10 102939923 102940111 -37376654 - MER53 DNA DNA 0 189 1 1056 301 48 15 chr10 102940137 102940473 -37376292 + LTR16A LTR ERVL 1 347 -103 738 260 46 27 chr10 102940720 102940939 -37375826 - L2 LINE L2 0 3313 3091 8238 61 113 7 chr10 102940940 102942093 -37374672 + L1P LINE L1 1 1275 -4871 3628 157 27 10 chr10 102942205 102942898 -37373867 + L1MB8 LINE L1 5474 6178 0 182 296 111 0 chr10 102943120 102943201 -37373564 - MIR SINE MIR -71 137 48 1669 180 3 7 chr10 102943317 102943601 -37373164 + AluJo SINE Alu 1 283 -29 2549 206 57 17 chr10 102943695 102944428 -37372337 - L1M LINE L1 -743 5403 4668 7642 223 41 36 chr10 102944532 102945583 -37371182 - L1M4 LINE L1 -1430 4716 3672 1990 120 25 4 chr10 102945583 102945887 -37370878 - AluSx SINE Alu 0 310 1 7642 223 41 36 chr10 102945887 102947251 -37369514 - L1M4 LINE L1 -2474 3672 2287 2150 112 0 0 chr10 102947253 102947555 -37369210 - AluY SINE Alu 0 308 7 9658 21 1 1 chr10 102947787 102949016 -37367749 - L1P1 LINE L1 -673 5482 4254 5432 135 50 47 chr10 102949008 102949977 -37366788 + L1MA3 LINE L1 5074 6050 -255 * 895 63 94 0 chr10 102949977 102950104 -37366661 - MER85 DNA T2_type 0 139 1 5432 135 50 47 chr10 102950104 102950361 -37366404 + L1MA3 LINE L1 6050 6305 0 26 30 0 0 chr10 102950456 102950489 -37366276 + AT_rich Low_complexity Low_complexity 1 33 0 296 304 135 7 chr10 102950854 102951002 -37365763 - L3 LINE CR1 -436 1141 975 359 257 46 28 chr10 102951016 102951125 -37365640 - MIR3 SINE MIR -15 193 83 475 218 56 9 chr10 102951236 102951384 -37365381 + MIR SINE MIR 21 190 -72 2362 75 0 10 chr10 102951657 102951952 -37364813 + AluSg SINE Alu 1 292 -18 450 130 76 0 chr10 102952019 102952111 -37364654 - L1MB3 LINE L1 -1 6182 6084 233 263 281 0 chr10 102952233 102952347 -37364418 + MIR SINE MIR 111 256 -6 190 259 115 58 chr10 102952969 102953108 -37363657 + L2 LINE L2 2319 2465 -849 426 139 139 37 chr10 102954024 102954132 -37362633 + L1MC5 LINE L1 7794 7912 -49 180 152 0 0 chr10 102954299 102954332 -37362433 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 730 161 21 7 chr10 102955060 102955203 -37361562 - MER69 DNA AcHobo 0 2526 2382 280 277 0 48 chr10 102955304 102955387 -37361378 - MER69 DNA AcHobo -1140 86 8 250 311 0 0 chr10 102955388 102955449 -37361316 + L2 LINE L2 3223 3283 -30 1357 124 17 66 chr10 102955449 102955690 -37361075 + MER30 DNA MER1_type 1 229 -1 525 328 199 19 chr10 102955838 102956250 -37360515 + L2 LINE L2 2827 3312 -1 258 253 42 63 chr10 102956368 102956463 -37360302 - MIR SINE MIR 0 262 170 1079 261 55 10 chr10 102956470 102956872 -37359893 - L1M4 LINE L1 -1495 4651 4232 226 267 22 33 chr10 102957159 102957302 -37359463 - MER5A DNA MER1_type 0 189 2 543 146 153 15 chr10 102957327 102957464 -37359301 - Charlie5 DNA MER1_type -27 2585 2430 390 174 0 14 chr10 102957462 102957531 -37359234 - Charlie5 DNA MER1_type -2542 70 3 * 188 349 24 36 chr10 102957622 102957705 -37359060 - MER5A DNA MER1_type -40 149 68 494 318 104 10 chr10 102958725 102958917 -37357848 - MIR SINE MIR -44 218 9 408 261 61 22 chr10 102958966 102959146 -37357619 - L1M4 LINE L1 -1713 4433 4247 251 296 14 0 chr10 102959689 102959760 -37357005 + L1ME LINE L1 137 208 -5997 1399 158 27 50 chr10 102959783 102960080 -37356685 + AluJo SINE Alu 1 290 -22 575 256 8 0 chr10 102960578 102960699 -37356066 + MLT2E LTR ERVL 1 122 -506 2794 33 0 3 chr10 102960699 102961034 -37355731 + L1PA4 LINE L1 5819 6152 -3 197 98 24 0 chr10 102961091 102961132 -37355633 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 28 0 0 0 chr10 102961711 102961739 -37355026 + AT_rich Low_complexity Low_complexity 1 28 0 1259 208 13 0 chr10 102962771 102963007 -37353758 + MER8 DNA MER2_type 1 239 0 1849 176 24 21 chr10 102963078 102963414 -37353351 - MER1B DNA MER1_type 0 337 1 429 345 49 32 chr10 102964688 102965094 -37351671 + MER89-int LTR ERV1 172 584 -4063 293 274 51 8 chr10 102965756 102965873 -37350892 + MER89-int LTR ERV1 3387 3508 -3293 1675 153 80 15 chr10 102966026 102966352 -37350413 - MER7A DNA MER2_type 0 346 2 325 276 11 0 chr10 102966395 102966482 -37350283 + MER89-int LTR ERV1 4157 4244 -3569 624 263 39 14 chr10 102967351 102967632 -37349133 + L1ME LINE L1 2173 2460 -3936 1897 200 66 60 chr10 102967650 102968152 -37348613 + MLT1D LTR MaLR 1 624 0 1887 149 3 23 chr10 102968181 102968482 -37348283 + AluJo SINE Alu 3 297 -15 286 280 93 19 chr10 102968483 102968740 -37348025 + L1ME LINE L1 2451 2726 -3489 362 349 166 0 chr10 102969027 102969196 -37347569 - MIR SINE MIR -6 256 60 227 227 0 0 chr10 102969204 102969248 -37347517 + LTR66 LTR ERVL 325 368 -242 251 349 124 6 chr10 102969775 102969944 -37346821 + MER117 DNA MER1_type 9 197 0 469 208 239 0 chr10 102969946 102970076 -37346689 + MIR SINE MIR 15 175 -87 207 162 0 0 chr10 102970455 102970492 -37346273 + GA-rich Low_complexity Low_complexity 1 37 0 23 54 0 0 chr10 102972090 102972127 -37344638 + AT_rich Low_complexity Low_complexity 1 37 0 2401 84 0 0 chr10 102972136 102972434 -37344331 - AluY SINE Alu -13 298 1 327 307 178 21 chr10 102972619 102972906 -37343859 - L1M4 LINE L1 -1325 4821 4490 186 349 0 60 chr10 102973657 102973740 -37343025 - L2 LINE L2 -8 3264 3187 238 256 218 31 chr10 102973760 102973970 -37342795 + L2 LINE L2 2766 3017 -255 320 315 197 5 chr10 102974400 102974613 -37342152 + MIR SINE MIR 2 255 -7 359 226 34 17 chr10 102974792 102974969 -37341796 + (TA)n Simple_repeat Simple_repeat 1 180 0 190 300 0 20 chr10 102975586 102975636 -37341129 + L2 LINE L2 3213 3261 -11 186 301 60 12 chr10 102975689 102975772 -37340993 + MIR SINE MIR 49 135 -73 1904 129 18 0 chr10 102975800 102976104 -37340661 + AluSx SINE Alu 1 309 0 221 281 34 45 chr10 102976740 102976829 -37339936 - L2 LINE L2 -29 3284 3197 243 170 0 0 chr10 102977351 102977398 -37339367 + (TG)n Simple_repeat Simple_repeat 2 48 0 1268 301 91 12 chr10 102977398 102977817 -37338948 + LTR16B LTR ERVL 8 459 -5 2658 310 77 28 chr10 102978014 102979704 -37337061 + HERV16 LTR ERVL 208 2094 -3661 563 223 54 36 chr10 102980560 102980726 -37336039 + L1ME LINE L1 5558 5726 -395 1385 184 51 37 chr10 102980817 102981111 -37335654 + AluJo SINE Alu 1 298 -14 429 261 93 42 chr10 102982672 102982887 -37333878 + L2 LINE L2 2147 2372 -942 2051 113 0 47 chr10 102983267 102983596 -37333169 + AluSq SINE Alu 1 315 0 1145 277 43 35 chr10 102983611 102984128 -37332637 + L1MC4 LINE L1 7447 7967 -75 266 210 136 25 chr10 102984501 102984582 -37332183 - MIR SINE MIR -57 205 116 2478 209 34 121 chr10 102985114 102985890 -37330875 + MER54A LTR ERVL 6 901 0 393 227 25 59 chr10 102985908 102986027 -37330738 + MIR3 SINE MIR 91 205 -3 226 360 108 0 chr10 102986894 102987005 -37329760 - L2 LINE L2 0 3272 3150 210 250 0 0 chr10 102987984 102988024 -37328741 + L2 LINE L2 3009 3048 -265 686 236 219 34 chr10 102988059 102988411 -37328354 + MLT1J2 LTR MaLR 34 450 0 186 43 0 0 chr10 102988484 102988507 -37328258 + (T)n Simple_repeat Simple_repeat 1 23 0 1202 285 75 34 chr10 102988735 102989360 -37327405 + L1ME4a LINE L1 5313 5963 -158 25 95 0 0 chr10 102989394 102989468 -37327297 + AT_rich Low_complexity Low_complexity 1 74 0 1320 223 14 51 chr10 102989528 102989941 -37326824 + L1M4 LINE L1 4457 4854 -1292 31 0 0 0 chr10 102990110 102990141 -37326624 + AT_rich Low_complexity Low_complexity 1 31 0 7933 20 1 1 chr10 102990142 102991392 -37325373 - L1HS LINE L1 -1 6154 4904 14690 112 27 5 chr10 102991519 102993824 -37322941 + L1P LINE L1 2040 4395 -1751 521 277 27 21 chr10 102995404 102995592 -37321173 + MER5A DNA MER1_type 1 189 0 351 279 147 5 chr10 102996880 102997084 -37319681 + L2 LINE L2 3075 3307 -6 378 91 0 0 chr10 102997096 102997151 -37319614 + (TGAA)n Simple_repeat Simple_repeat 1 55 0 1044 112 0 31 chr10 102997196 102997357 -37319408 + L1PA8A LINE L1 5967 6122 -9 22 56 0 0 chr10 102997357 102997393 -37319372 + AT_rich Low_complexity Low_complexity 1 36 0 4644 137 50 34 chr10 102997552 102997688 -37319077 - L1MB3 LINE L1 -2 6181 6049 2099 110 24 0 chr10 102997688 102997979 -37318786 - AluSg SINE Alu -12 298 1 4644 137 50 34 chr10 102997979 102998730 -37318035 - L1MB3 LINE L1 -134 6049 5280 313 327 93 13 chr10 102998777 102998968 -37317797 + MIR SINE MIR 3 206 -56 1978 163 51 53 chr10 102999015 102999426 -37317339 - MLT2D LTR ERVL -4 410 1 976 277 75 53 chr10 102999660 102999716 -37317049 - MLT1G1 LTR MaLR 0 595 542 2364 88 0 3 chr10 102999716 103000023 -37316742 + AluY SINE Alu 1 306 -5 976 277 75 53 chr10 103000023 103000061 -37316704 - MLT1G1 LTR MaLR -53 542 506 1626 201 0 10 chr10 103000061 103000355 -37316410 - AluJo SINE Alu -21 291 1 976 277 75 53 chr10 103000355 103000789 -37315976 - MLT1G1 LTR MaLR -89 506 11 720 233 122 6 chr10 103000972 103001152 -37315613 - L2 LINE L2 0 3313 3113 952 253 228 40 chr10 103001181 103001581 -37315184 - MLT1L LTR MaLR -11 604 130 279 274 83 12 chr10 103001729 103001813 -37314952 - L2 LINE L2 -258 3055 2966 219 219 38 105 chr10 103001920 103002025 -37314740 + L2 LINE L2 2963 3060 -212 364 366 41 0 chr10 103002150 103002273 -37314492 + L2 LINE L2 3144 3271 -1 948 196 28 73 chr10 103002801 103003087 -37313678 - L1ME3A LINE L1 -4 6166 5894 642 218 230 0 chr10 103003086 103003338 -37313427 - L1M4 LINE L1 -3201 2945 2636 * 2464 53 0 13 chr10 103003822 103004121 -37312644 + AluY SINE Alu 1 295 -16 288 53 0 0 chr10 103004335 103004373 -37312392 + (CA)n Simple_repeat Simple_repeat 2 39 0 360 342 58 0 chr10 103004559 103004679 -37312086 + L2 LINE L2 3133 3259 -13 3449 149 23 43 chr10 103005333 103005979 -37310786 + L1MB4 LINE L1 5548 6180 0 448 219 117 8 chr10 103006004 103006132 -37310633 + L1ME4a LINE L1 5556 5697 -424 2351 95 0 16 chr10 103006230 103006546 -37310219 - AluSx SINE Alu -1 311 1 440 267 192 8 chr10 103006882 103007242 -37309523 + L1ME4a LINE L1 5695 6120 -1 212 234 55 102 chr10 103007420 103007548 -37309217 + L2 LINE L2 2991 3112 -160 478 281 88 0 chr10 103007659 103007819 -37308946 - MIR SINE MIR -10 252 79 354 217 0 60 chr10 103007812 103007895 -37308870 + L2 LINE L2 3236 3313 0 * 797 153 32 107 chr10 103008658 103008874 -37307891 - MER20 DNA MER1_type 0 219 20 307 313 104 57 chr10 103009238 103009468 -37307297 + MIR SINE MIR 12 252 -10 520 271 48 48 chr10 103009836 103009946 -37306819 + MIR SINE MIR 35 147 -115 2121 129 3 7 chr10 103009946 103010248 -37306517 + AluSx SINE Alu 1 301 -11 520 271 48 48 chr10 103010248 103010344 -37306421 + MIR SINE MIR 146 241 -21 180 0 0 0 chr10 103010708 103010728 -37306037 + (CAT)n Simple_repeat Simple_repeat 2 21 0 182 330 261 0 chr10 103010733 103010821 -37305944 - L2 LINE L2 -16 3256 3146 181 218 127 0 chr10 103011555 103011610 -37305155 + L3b LINE CR1 1421 1482 -101 7614 49 9 1 chr10 103012290 103013669 -37303096 + L1PA6 LINE L1 4770 6154 0 196 295 77 0 chr10 103013669 103013747 -37303018 + MIR SINE MIR 154 237 -25 23 54 0 0 chr10 103013778 103013815 -37302950 + AT_rich Low_complexity Low_complexity 1 37 0 2190 113 3 10 chr10 103013989 103014300 -37302465 - AluSx SINE Alu -3 309 1 207 0 0 0 chr10 103014632 103014655 -37302110 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4995 189 27 19 chr10 103015582 103016537 -37300228 + MER45B DNA AcHobo 1 963 -77 2171 119 0 0 chr10 103016538 103016833 -37299932 - AluSq SINE Alu -18 295 1 208 235 25 49 chr10 103018116 103018197 -37298568 + L3 LINE CR1 642 720 -857 792 300 135 24 chr10 103018565 103019335 -37297430 + L2 LINE L2 2456 3312 -1 202 237 17 0 chr10 103020585 103020644 -37296121 + (CA)n Simple_repeat Simple_repeat 1 60 0 287 253 63 0 chr10 103020877 103020956 -37295809 + L1MC/D LINE L1 5600 5683 -2125 574 331 84 36 chr10 103020957 103021313 -37295452 + L2 LINE L2 1131 1503 -1811 983 149 58 6 chr10 103021820 103021994 -37294771 - MER5A DNA MER1_type -1 188 6 253 335 32 100 chr10 103022536 103022817 -37293948 - L2 LINE L2 -16 3256 2995 704 145 30 15 chr10 103023335 103023466 -37293299 + MIR SINE MIR 73 205 -57 624 251 119 36 chr10 103023886 103024105 -37292660 + MIR SINE MIR 25 261 -1 246 292 15 0 chr10 103024194 103024259 -37292506 + MIR3 SINE MIR 116 181 -27 355 261 136 0 chr10 103024550 103024638 -37292127 + MIR3 SINE MIR 109 208 0 878 274 69 66 chr10 103025758 103025923 -37290842 + MARNA DNA Mariner 125 288 -298 2340 96 0 7 chr10 103025923 103026224 -37290541 - AluSq SINE Alu -14 299 1 878 274 69 66 chr10 103026224 103026510 -37290255 + MARNA DNA Mariner 288 577 -9 272 296 12 0 chr10 103028245 103028326 -37288439 - L2 LINE L2 -7 3306 3225 500 346 65 15 chr10 103028356 103028616 -37288149 - L2 LINE L2 -407 2907 2635 4436 167 42 53 chr10 103028862 103029826 -37286939 + LTR13 LTR ERVK 1 954 0 842 168 58 29 chr10 103030065 103030238 -37286527 - MER5B DNA MER1_type 0 178 1 2146 93 4 0 chr10 103030759 103031067 -37285698 + AluSx SINE Alu 1 309 0 4198 151 44 16 chr10 103031580 103032070 -37284695 + MER6 DNA MER2_type 119 637 -228 2405 80 0 13 chr10 103032070 103032381 -37284384 - AluY SINE Alu -4 307 1 4198 151 44 16 chr10 103032381 103032617 -37284148 + MER6 DNA MER2_type 637 865 0 291 318 80 0 chr10 103033114 103033202 -37283563 - L2 LINE L2 -27 3245 3151 249 217 159 0 chr10 103033430 103033499 -37283266 - MIR SINE MIR -78 184 105 998 268 149 37 chr10 103033612 103034159 -37282606 + L2 LINE L2 2678 3309 -4 201 296 88 48 chr10 103034474 103034599 -37282166 - MIR3 SINE MIR -31 177 48 1953 151 0 56 chr10 103034684 103035041 -37281724 - L1MB7 LINE L1 -16 6168 5832 275 219 43 14 chr10 103035978 103036117 -37280648 - L1M4 LINE L1 -294 5884 5742 246 324 35 49 chr10 103036597 103036739 -37280026 + LTR16A1 LTR ERVL 308 447 -10 216 214 0 0 chr10 103037807 103037849 -37278916 + (TAA)n Simple_repeat Simple_repeat 3 44 0 730 233 57 0 chr10 103038132 103038291 -37278474 - MIR SINE MIR -82 180 13 281 299 17 81 chr10 103038378 103038552 -37278213 - L2 LINE L2 -211 3061 2899 2005 114 29 0 chr10 103039321 103039593 -37277172 + AluSx SINE Alu 1 280 -32 272 224 41 0 chr10 103040387 103040436 -37276329 + L2 LINE L2 3238 3288 -25 182 61 0 61 chr10 103041502 103041535 -37275230 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 22 99 0 0 chr10 103041577 103041648 -37275117 + AT_rich Low_complexity Low_complexity 1 71 0 237 336 55 83 chr10 103041818 103042273 -37274492 - L2 LINE L2 -10 3262 2821 423 287 0 0 chr10 103042926 103043027 -37273738 + MIR3 SINE MIR 87 187 -21 225 0 0 0 chr10 103043471 103043496 -37273269 + (CA)n Simple_repeat Simple_repeat 2 26 0 184 219 14 14 chr10 103043512 103043585 -37273180 + (TA)n Simple_repeat Simple_repeat 2 74 0 2474 73 0 0 chr10 103043606 103043907 -37272858 + AluY SINE Alu 1 301 -10 255 298 157 17 chr10 103044358 103044536 -37272229 - MIR3 SINE MIR -3 205 3 832 305 67 1 chr10 103045081 103045427 -37271338 - L2 LINE L2 -260 3053 2685 233 270 16 0 chr10 103045523 103045586 -37271179 + CT-rich Low_complexity Low_complexity 2 65 0 350 275 79 48 chr10 103045590 103045779 -37270986 - L2 LINE L2 -1 3312 3118 320 325 71 30 chr10 103045774 103045943 -37270822 - MIR SINE MIR -86 176 1 * 2378 106 0 0 chr10 103048058 103048369 -37268396 + AluY SINE Alu 1 311 0 290 264 96 32 chr10 103048392 103048546 -37268219 + MIR SINE MIR 9 178 -84 459 256 55 6 chr10 103048591 103048755 -37268010 + L1ME4a LINE L1 5948 6119 -2 639 290 108 69 chr10 103048836 103049171 -37267594 - L2 LINE L2 -1 3271 2924 821 248 81 24 chr10 103049989 103050235 -37266530 + MIR SINE MIR 3 262 0 477 571 0 11 chr10 103051090 103051267 -37265498 + polypurine Low_complexity Low_complexity 3 177 0 677 250 23 17 chr10 103051827 103051999 -37264766 - MER5B DNA MER1_type 0 178 6 710 299 116 14 chr10 103052120 103052474 -37264291 - L2 LINE L2 0 3313 2924 339 190 51 38 chr10 103053042 103053121 -37263644 + L2 LINE L2 3184 3263 -9 355 298 135 22 chr10 103053350 103053528 -37263237 + MIR3 SINE MIR 3 200 -8 21 36 0 0 chr10 103053583 103053611 -37263154 + AT_rich Low_complexity Low_complexity 1 28 0 6467 138 68 45 chr10 103053734 103054594 -37262171 - L1MCa LINE L1 -5098 1328 428 2196 95 10 3 chr10 103054594 103054890 -37261875 + AluSc SINE Alu 1 298 -11 6467 138 68 45 chr10 103054890 103055309 -37261456 - L1MCa LINE L1 -5998 428 20 1883 176 49 77 chr10 103055313 103055869 -37260896 - L1M4 LINE L1 -931 5215 4676 656 233 0 0 chr10 103055870 103056003 -37260762 - HERVL40 LTR ERVL -4413 1117 985 814 219 127 4 chr10 103056359 103056587 -37260178 - LTR40a LTR ERVL 0 519 264 577 186 39 31 chr10 103056840 103056969 -37259796 - HERVL40 LTR ERVL -2 5528 5399 2123 153 4 26 chr10 103056969 103057360 -37259405 + MLT2D LTR ERVL 1 534 -20 368 258 11 0 chr10 103057384 103057473 -37259292 - L1MC4 LINE L1 -1339 6703 6614 345 299 9 9 chr10 103057398 103057505 -37259260 + L1MC4 LINE L1 6614 6720 -1322 * 186 209 0 0 chr10 103057524 103057567 -37259198 + (TA)n Simple_repeat Simple_repeat 2 44 0 326 66 0 98 chr10 103057583 103057644 -37259121 + MLT2B1 LTR ERVL 466 520 0 215 208 299 13 chr10 103057774 103057851 -37258914 + L2 LINE L2 3213 3311 -2 284 294 103 29 chr10 103058098 103058234 -37258531 + L2 LINE L2 3160 3305 -8 5844 216 138 21 chr10 103058443 103060218 -37256547 + L1MA8 LINE L1 465 2446 -5043 2166 237 15 56 chr10 103060216 103060326 -37256439 + L1MA8 LINE L1 2404 2517 -5048 * 2230 122 16 0 chr10 103060326 103060629 -37256136 - AluSx SINE Alu -2 310 3 2171 118 0 20 chr10 103060637 103060942 -37255823 - AluSx SINE Alu -13 299 1 2166 237 15 56 chr10 103060942 103061088 -37255677 + L1MA8 LINE L1 2524 2674 -4891 2951 75 3 3 chr10 103061088 103061463 -37255302 + THE1C LTR MaLR 1 375 0 2166 237 15 56 chr10 103061463 103062104 -37254661 + L1MA8 LINE L1 2674 3274 -4291 5070 145 23 12 chr10 103062125 103062855 -37253910 + L1MA8 LINE L1 5074 5819 -1746 2552 59 0 3 chr10 103062855 103063160 -37253605 + AluY SINE Alu 1 304 -7 5070 145 23 12 chr10 103063160 103063368 -37253397 + L1MA8 LINE L1 5819 6023 -1542 2586 112 11 16 chr10 103063378 103063814 -37252951 + L1MA8 LINE L1 6935 7368 -342 555 140 9 9 chr10 103063794 103063901 -37252864 + L1 LINE L1 4180 4286 -1860 * 1589 135 41 55 chr10 103063950 103064313 -37252452 + L1MA8 LINE L1 7349 7706 -4 229 373 72 54 chr10 103064631 103065020 -37251745 + L2 LINE L2 2487 2882 -432 1972 142 4 0 chr10 103066639 103066943 -37249822 - AluSx SINE Alu 0 305 1 346 271 122 43 chr10 103066992 103067180 -37249585 - MIR SINE MIR 0 262 60 814 190 37 141 chr10 103067334 103067576 -37249189 - MIR SINE MIR -44 218 2 186 304 96 24 chr10 103067576 103067624 -37249141 + MIR SINE MIR 84 140 -122 1956 92 4 8 chr10 103067901 103068161 -37248604 - AluY SINE Alu -50 261 3 461 327 26 48 chr10 103068557 103068829 -37247936 + L3 LINE CR1 1100 1365 -212 246 300 25 12 chr10 103068830 103068900 -37247865 - MIR SINE MIR -181 81 8 1004 253 133 3 chr10 103068900 103069216 -37247549 - LTR18A LTR ERVL 0 357 1 186 167 0 0 chr10 103071207 103071243 -37245522 + (TAA)n Simple_repeat Simple_repeat 3 38 0 262 350 29 19 chr10 103071341 103071444 -37245321 - MIR SINE MIR -131 131 28 932 200 107 58 chr10 103071462 103071827 -37244938 - MER113 DNA MER1_type? 0 521 139 2361 103 0 0 chr10 103072352 103072654 -37244111 - AluSx SINE Alu -10 302 1 2276 96 3 7 chr10 103072863 103073156 -37243609 + AluSc SINE Alu 1 292 -17 1594 217 66 11 chr10 103073596 103074062 -37242703 - MER110A LTR ERV1 0 468 27 1915 150 21 10 chr10 103074276 103074685 -37242080 + L1MB8 LINE L1 5505 5967 -217 826 236 51 45 chr10 103074695 103074965 -37241800 - MER65B LTR ERV1 -11 520 246 1818 136 82 17 chr10 103074965 103075319 -37241446 - MER51B LTR ERV1 0 377 1 826 236 51 45 chr10 103075319 103075362 -37241403 - MER65B LTR ERV1 -285 246 205 242 229 29 29 chr10 103075389 103075459 -37241306 - MER65C LTR ERV1 -389 72 3 795 158 42 47 chr10 103075506 103075696 -37241069 + L1MB8 LINE L1 5984 6172 -6 3280 199 55 40 chr10 103075948 103076823 -37239942 - MER97a DNA MER1_type -4 890 3 25 31 0 0 chr10 103076924 103076956 -37239809 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 103077188 103077211 -37239554 + AT_rich Low_complexity Low_complexity 1 23 0 1583 143 139 4 chr10 103077230 103077489 -37239276 + AluSg1 SINE Alu 1 294 -15 22 35 0 0 chr10 103077493 103077522 -37239243 + AT_rich Low_complexity Low_complexity 1 29 0 252 0 0 0 chr10 103077536 103077568 -37239197 + (CA)n Simple_repeat Simple_repeat 1 60 0 252 0 0 0 chr10 103077568 103077596 -37239169 + (CA)n Simple_repeat Simple_repeat 1 28 0 968 232 106 70 chr10 103077813 103078452 -37238313 + HAL1 LINE L1 999 1660 -847 274 250 0 15 chr10 103078456 103078524 -37238241 + HAL1 LINE L1 1834 1900 -607 399 226 29 0 chr10 103078912 103079014 -37237751 - MER110 LTR ERV1 -6 485 381 296 353 18 23 chr10 103079282 103079503 -37237262 - MER89-int LTR ERV1 -5345 1456 1237 226 283 0 0 chr10 103079606 103079666 -37237099 + GA-rich Low_complexity Low_complexity 4 63 0 1504 186 18 93 chr10 103080778 103081283 -37235482 - MER110A LTR ERV1 0 468 2 930 262 6 6 chr10 103082708 103082927 -37233838 + MIR SINE MIR 36 258 -4 213 356 0 0 chr10 103082952 103083011 -37233754 + MIR SINE MIR 68 126 -82 660 178 23 4 chr10 103084243 103084396 -37232369 + L1MB8 LINE L1 5860 6006 -172 778 311 68 1 chr10 103084398 103084744 -37232021 + L2 LINE L2 2685 3053 -260 255 298 157 17 chr10 103085289 103085467 -37231298 + MIR3 SINE MIR 3 205 -3 2449 73 0 0 chr10 103085918 103086218 -37230547 - AluY SINE Alu -11 300 1 184 219 14 14 chr10 103086239 103086312 -37230453 + (TA)n Simple_repeat Simple_repeat 2 74 0 225 0 0 0 chr10 103086328 103086353 -37230412 + (TG)n Simple_repeat Simple_repeat 2 26 0 432 287 0 0 chr10 103086797 103086898 -37229867 - MIR3 SINE MIR -21 187 87 243 339 55 83 chr10 103087551 103088006 -37228759 + L2 LINE L2 2821 3262 -10 22 99 0 0 chr10 103088176 103088247 -37228518 + AT_rich Low_complexity Low_complexity 1 71 0 182 61 0 61 chr10 103088289 103088322 -37228443 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 273 224 41 0 chr10 103089388 103089437 -37227328 - L2 LINE L2 -25 3288 3238 1998 117 29 0 chr10 103090229 103090503 -37226262 - AluSx SINE Alu -30 282 1 286 305 11 75 chr10 103091272 103091446 -37225319 + L2 LINE L2 2899 3061 -211 739 233 57 0 chr10 103091533 103091692 -37225073 + MIR SINE MIR 13 180 -82 216 214 0 0 chr10 103091975 103092017 -37224748 + (TTA)n Simple_repeat Simple_repeat 3 44 0 242 186 43 14 chr10 103093711 103093781 -37222984 + L1MB7 LINE L1 5746 5817 -495 1790 151 0 56 chr10 103094783 103095140 -37221625 + L1MB7 LINE L1 5832 6168 -16 216 296 88 48 chr10 103095225 103095350 -37221415 + MIR3 SINE MIR 48 177 -31 1039 266 146 42 chr10 103095665 103096216 -37220549 - L2 LINE L2 -4 3309 2678 253 217 159 0 chr10 103096329 103096398 -37220367 + MIR SINE MIR 105 184 -78 299 318 80 0 chr10 103096626 103096714 -37220051 + L2 LINE L2 3151 3245 -27 4357 154 77 17 chr10 103097211 103097447 -37219318 - MER6 DNA MER2_type 0 865 645 2387 86 0 13 chr10 103097447 103097762 -37219003 + AluY SINE Alu 1 311 0 4357 154 77 17 chr10 103097762 103098341 -37218424 - MER6 DNA MER2_type -220 645 1 2395 83 0 3 chr10 103098397 103098699 -37218066 - AluY SINE Alu -10 301 1 1167 167 155 16 chr10 103098833 103099084 -37217681 + AluJo SINE Alu 17 302 -10 875 296 32 0 chr10 103099150 103099370 -37217395 + MIR SINE MIR 17 243 -19 180 277 43 0 chr10 103099761 103099808 -37216957 - L2 LINE L2 -11 3261 3213 195 167 0 0 chr10 103100529 103100571 -37216194 + A-rich Low_complexity Low_complexity 1 42 0 211 312 147 0 chr10 103101241 103101350 -37215415 + L2 LINE L2 2633 2757 -557 2634 55 0 0 chr10 103101810 103102121 -37214644 - AluY SINE Alu 0 311 1 180 372 35 23 chr10 103102185 103102271 -37214494 + L2 LINE L2 3004 3090 -182 218 122 0 20 chr10 103103484 103103533 -37213232 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 342 327 0 20 chr10 103103715 103103816 -37212949 + MIR SINE MIR 6 104 -158 21 36 0 0 chr10 103103818 103103846 -37212919 + AT_rich Low_complexity Low_complexity 1 28 0 470 271 23 0 chr10 103104262 103104391 -37212374 + MER69 DNA AcHobo 1 132 -1094 250 213 66 0 chr10 103104398 103104459 -37212306 + MER69 DNA AcHobo 2452 2516 -10 320 204 0 0 chr10 103104534 103104588 -37212177 + Tigger2 DNA MER2_type 5 58 -2660 2358 121 8 94 chr10 103104598 103104810 -37211955 + Tigger2 DNA MER2_type 2281 2431 -287 1724 168 3 55 chr10 103104810 103105138 -37211627 - AluJb SINE Alu -1 311 1 2358 121 8 94 chr10 103105138 103105404 -37211361 + Tigger2 DNA MER2_type 2431 2718 0 245 139 0 0 chr10 103105891 103105927 -37210838 - L2 LINE L2 -16 3256 3221 502 359 11 85 chr10 103106522 103106792 -37209973 + L2 LINE L2 3005 3254 -18 272 157 14 71 chr10 103106792 103106829 -37209936 + GA-rich Low_complexity Low_complexity 3 41 -27 4408 135 36 24 chr10 103106829 103107124 -37209641 + L1MA5 LINE L1 5460 5750 -550 1864 177 3 7 chr10 103107124 103107429 -37209336 + AluJo SINE Alu 1 304 -8 4408 135 36 24 chr10 103107429 103107861 -37208904 + L1MA5 LINE L1 5750 6201 -99 2440 89 0 0 chr10 103107861 103108165 -37208600 - AluSx SINE Alu -8 304 1 4408 135 36 24 chr10 103108165 103108265 -37208500 + L1MA5 LINE L1 6201 6298 -2 272 157 14 71 chr10 103108265 103108297 -37208468 + GA-rich Low_complexity Low_complexity 41 68 0 225 239 0 28 chr10 103109027 103109098 -37207667 + (TAA)n Simple_repeat Simple_repeat 1 69 0 276 241 36 60 chr10 103109155 103109238 -37207527 - MIR SINE MIR -104 158 78 2061 140 7 3 chr10 103109482 103109789 -37206976 + AluSx SINE Alu 1 308 -4 2390 71 0 13 chr10 103109789 103110099 -37206666 + AluY SINE Alu 1 306 -5 707 285 35 0 chr10 103110559 103110759 -37206006 + MLT1G LTR MaLR 1 207 -388 957 251 25 4 chr10 103110765 103111008 -37205757 + MLT1G LTR MaLR 343 590 0 355 272 22 0 chr10 103111534 103111626 -37205139 + L2 LINE L2 3215 3308 -5 354 245 66 38 chr10 103111800 103111906 -37204859 + L2 LINE L2 3164 3272 0 411 354 67 6 chr10 103112447 103112625 -37204140 + MER5A DNA MER1_type 1 189 0 2065 147 0 13 chr10 103112930 103113237 -37203528 + AluSx SINE Alu 1 303 -9 673 254 114 5 chr10 103114780 103114981 -37201784 + MIR SINE MIR 37 259 -3 21 0 0 0 chr10 103115395 103115416 -37201349 + AT_rich Low_complexity Low_complexity 1 21 0 695 274 92 32 chr10 103116132 103116413 -37200352 - L3 LINE CR1 -11 1566 1269 2300 81 13 3 chr10 103117321 103117629 -37199136 + AluY SINE Alu 1 311 0 216 97 0 0 chr10 103117928 103117959 -37198806 + (T)n Simple_repeat Simple_repeat 1 31 0 325 211 25 87 chr10 103118397 103118558 -37198207 - L1ME4a LINE L1 -2 6119 5969 379 126 23 201 chr10 103120033 103120121 -37196644 - MER69 DNA AcHobo 0 2526 2482 1341 151 159 4 chr10 103120121 103120373 -37196392 + AluJo SINE Alu 1 291 -11 379 126 23 201 chr10 103120373 103120458 -37196307 - MER69 DNA AcHobo -44 2482 2384 309 140 53 0 chr10 103120608 103120665 -37196100 - MER69 DNA AcHobo -2459 67 8 190 270 257 33 chr10 103120920 103121072 -37195693 - MIR SINE MIR -11 251 66 305 51 0 0 chr10 103121396 103121435 -37195330 + MER103 DNA DNA 2 40 -126 443 290 59 12 chr10 103121850 103122019 -37194746 + MLT1J2 LTR MaLR 274 450 0 2297 94 7 0 chr10 103123397 103123695 -37193070 - AluSx SINE Alu -12 300 1 250 276 163 31 chr10 103124487 103124585 -37192180 + MIR SINE MIR 21 131 -77 4330 211 124 33 chr10 103124633 103127218 -37189547 - L1MCb LINE L1 -3644 2920 41 2104 129 3 7 chr10 103127708 103128011 -37188754 - AluY SINE Alu -9 302 1 2251 113 0 3 chr10 103128388 103128689 -37188076 - AluSq SINE Alu -13 300 1 1834 148 26 20 chr10 103128960 103129263 -37187502 - AluSx SINE Alu -7 305 1 968 234 60 30 chr10 103129805 103130104 -37186661 - MER58B DNA MER1_type -2 339 32 358 248 29 22 chr10 103130157 103130294 -37186471 - L1M4 LINE L1 -996 5150 5013 230 323 16 0 chr10 103130323 103130450 -37186315 + L1MCa LINE L1 1461 1589 -4837 2794 166 24 15 chr10 103130545 103130798 -37185967 - L1MB5 LINE L1 0 6174 5925 1127 204 39 9 chr10 103130798 103131029 -37185736 + MER8 DNA MER2_type 1 238 -1 2794 166 24 15 chr10 103131029 103131324 -37185441 - L1MB5 LINE L1 -249 5925 5621 337 231 135 10 chr10 103131961 103132065 -37184700 - MIR3 SINE MIR -21 187 71 693 250 31 18 chr10 103133184 103133412 -37183353 - L1MC4a LINE L1 -1894 5914 5684 295 298 95 0 chr10 103133421 103133505 -37183260 + MIR SINE MIR 41 132 -76 2185 94 20 3 chr10 103133519 103133817 -37182948 - AluSc SINE Alu -6 303 1 2376 98 14 0 chr10 103133985 103134331 -37182434 + L1PA13 LINE L1 5798 6148 -15 188 57 29 57 chr10 103134387 103134422 -37182343 - MIR3 SINE MIR -49 159 126 484 279 23 23 chr10 103134807 103134936 -37181829 - L2 LINE L2 -1 3271 3143 233 217 174 22 chr10 103134938 103135030 -37181735 - L2 LINE L2 -97 3216 3111 624 340 41 10 chr10 103135043 103135431 -37181334 + L1PA16 LINE L1 16 415 -7166 13113 221 21 7 chr10 103136266 103141526 -37175239 + L1PA16 LINE L1 2261 7604 0 891 241 154 15 chr10 103141527 103141982 -37174783 - L2 LINE L2 -197 3116 2596 1187 168 13 34 chr10 103142007 103142148 -37174617 - MER46A DNA MER2_type -2495 236 100 3903 40 34 2 chr10 103142148 103142623 -37174142 + LTR2B LTR ERV1 1 490 0 1187 168 13 34 chr10 103142623 103142719 -37174046 - MER46A DNA MER2_type -2631 100 4 350 284 29 20 chr10 103142720 103142822 -37173943 - L2 LINE L2 -739 2575 2473 233 353 15 22 chr10 103145407 103145543 -37171222 + MIR SINE MIR 20 154 -108 559 217 184 7 chr10 103145559 103145711 -37171054 - MER5A DNA MER1_type -1 188 10 186 320 0 13 chr10 103145730 103145808 -37170957 + MIR SINE MIR 184 260 -2 1929 116 0 25 chr10 103146265 103146540 -37170225 + AluSx SINE Alu 1 268 -44 292 316 43 0 chr10 103146658 103146775 -37169990 - MIR SINE MIR 0 262 141 418 320 0 0 chr10 103146783 103146905 -37169860 + L2 LINE L2 2921 3042 -271 364 314 86 0 chr10 103146908 103147013 -37169752 - MIR SINE MIR -117 145 32 1265 206 60 30 chr10 103147055 103147172 -37169593 + AluJo SINE Alu 1 113 -199 360 0 0 0 chr10 103147172 103147212 -37169553 + (CA)n Simple_repeat Simple_repeat 2 41 0 1265 206 60 30 chr10 103147212 103147395 -37169370 + AluJo SINE Alu 113 310 -2 1275 167 54 54 chr10 103147406 103147682 -37169083 + AluJo SINE Alu 22 297 -15 487 235 9 9 chr10 103148797 103148912 -37167853 + L2 LINE L2 3199 3313 0 614 313 45 16 chr10 103149109 103149355 -37167410 - MIR SINE MIR -6 256 4 672 197 211 0 chr10 103149999 103150146 -37166619 - MER5A DNA MER1_type -3 186 9 210 282 13 51 chr10 103150193 103150271 -37166494 + MER5A DNA MER1_type 17 91 -98 * 293 219 0 16 chr10 103150218 103150282 -37166483 - MER5B DNA MER1_type -29 149 87 24 32 0 0 chr10 103150380 103150411 -37166354 + AT_rich Low_complexity Low_complexity 1 31 0 695 288 61 50 chr10 103150477 103150873 -37165892 + HAL1 LINE L1 1 400 -2107 1887 220 47 22 chr10 103150876 103151325 -37165440 + Charlie1 DNA MER1_type 1 466 -2295 1429 167 78 32 chr10 103151325 103151606 -37165159 - AluJo SINE Alu -18 294 1 1887 220 47 22 chr10 103151606 103151665 -37165100 + Charlie1 DNA MER1_type 466 522 -2239 6182 194 71 23 chr10 103151668 103152385 -37164380 + Charlie1 DNA MER1_type 1002 1683 -1078 1903 158 0 26 chr10 103152385 103152695 -37164070 - AluSx SINE Alu -10 302 1 6182 194 71 23 chr10 103152695 103153556 -37163209 + Charlie1 DNA MER1_type 1683 2656 -105 2035 192 39 15 chr10 103153553 103153643 -37163122 - MER47B DNA MER2_type -1905 418 332 * 2409 152 34 0 chr10 103153643 103154057 -37162708 + MSTA LTR MaLR 1 428 0 2035 192 39 15 chr10 103154057 103154373 -37162392 - MER47B DNA MER2_type -1991 332 2 474 186 10 0 chr10 103154379 103154476 -37162289 + Charlie1 DNA MER1_type 2663 2760 -1 2957 235 96 80 chr10 103154543 103156296 -37160469 + HAL1 LINE L1 491 2271 -236 2005 212 57 25 chr10 103156909 103157471 -37159294 - L1ME2 LINE L1 -21 6077 5498 2402 237 54 24 chr10 103157511 103158039 -37158726 - L1ME2 LINE L1 -2713 3367 2797 1502 199 0 11 chr10 103158039 103158316 -37158449 - AluJo SINE Alu -18 294 21 2402 237 54 24 chr10 103158316 103158738 -37158027 - L1ME2 LINE L1 -3283 2797 2389 1462 208 25 89 chr10 103158746 103159271 -37157494 - MLT1D LTR MaLR -14 491 1 3279 248 57 32 chr10 103159276 103160096 -37156669 - L1ME2 LINE L1 -3694 2386 1587 2238 123 3 3 chr10 103160096 103160406 -37156359 - AluSx SINE Alu -2 310 1 3279 248 57 32 chr10 103160406 103161321 -37155444 - L1ME2 LINE L1 -4493 1587 651 417 286 67 108 chr10 103161563 103161888 -37154877 - L1ME2 LINE L1 -5551 519 221 2254 97 3 3 chr10 103161888 103162187 -37154578 + AluY SINE Alu 1 299 -12 417 286 67 108 chr10 103162187 103162382 -37154383 - L1ME2 LINE L1 -5849 221 20 531 269 104 33 chr10 103163317 103163529 -37153236 + MIR SINE MIR 8 234 -28 804 281 84 31 chr10 103163617 103164075 -37152690 - L2 LINE L2 -115 3198 2715 2358 53 0 4 chr10 103164116 103164426 -37152339 + AluY SINE Alu 1 309 0 278 113 0 19 chr10 103166885 103166938 -37149827 + (GGA)n Simple_repeat Simple_repeat 2 53 0 1616 246 10 2 chr10 103168069 103168464 -37148301 + L1P3 LINE L1 203 600 -5275 * 3348 229 5 38 chr10 103168449 103169472 -37147293 + L1P3 LINE L1 1167 2155 -4306 24598 36 7 4 chr10 103169472 103173277 -37143488 + L1PA10 LINE L1 2360 6168 0 3066 199 57 40 chr10 103173524 103174366 -37142399 - MER97a DNA MER1_type? -36 858 3 25 31 0 0 chr10 103174467 103174499 -37142266 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 103174731 103174754 -37142011 + AT_rich Low_complexity Low_complexity 1 23 0 1583 143 139 4 chr10 103174773 103175032 -37141733 + AluSg1 SINE Alu 1 294 -15 22 35 0 0 chr10 103175036 103175065 -37141700 + AT_rich Low_complexity Low_complexity 1 29 0 252 0 0 0 chr10 103175079 103175111 -37141654 + (CA)n Simple_repeat Simple_repeat 1 60 0 252 0 0 0 chr10 103175111 103175139 -37141626 + (CA)n Simple_repeat Simple_repeat 1 28 0 968 236 96 66 chr10 103175356 103176067 -37140698 + HAL1 LINE L1 999 1900 -607 399 226 29 0 chr10 103176455 103176557 -37140208 - MER110 LTR ERV1 -6 485 381 297 360 13 22 chr10 103176825 103177053 -37139712 - MER89-int LTR ERV1 -5345 1456 1231 226 283 0 0 chr10 103177149 103177209 -37139556 + GA-rich Low_complexity Low_complexity 4 63 0 263 264 19 38 chr10 103177570 103177676 -37139089 - MER89-int LTR ERV1 -6088 713 610 1504 186 18 93 chr10 103178321 103178826 -37137939 - MER110A LTR ERV1 0 468 2 930 262 6 6 chr10 103180251 103180470 -37136295 + MIR SINE MIR 36 258 -4 213 356 0 0 chr10 103180495 103180554 -37136211 + MIR SINE MIR 68 126 -82 181 348 67 0 chr10 103180974 103181063 -37135702 + L2 LINE L2 9 103 -3211 1575 150 16 19 chr10 103181797 103182104 -37134661 + L1MB8 LINE L1 5873 6178 0 382 146 191 11 chr10 103182814 103182903 -37133862 - MIR SINE MIR -77 185 81 232 339 36 36 chr10 103182982 103183094 -37133671 + L2 LINE L2 3152 3263 -9 2413 84 3 6 chr10 103183732 103184043 -37132722 + AluSx SINE Alu 1 310 -2 219 376 30 0 chr10 103184346 103184447 -37132318 + MIR SINE MIR 36 139 -69 746 174 8 23 chr10 103184608 103184625 -37132140 - FLAM_C SINE Alu -171 131 115 180 0 0 0 chr10 103184625 103184645 -37132120 + (TAG)n Simple_repeat Simple_repeat 1 20 0 746 174 8 23 chr10 103184645 103184759 -37132006 - FLAM_C SINE Alu -187 115 2 34 79 0 0 chr10 103186503 103186579 -37130186 + AT_rich Low_complexity Low_complexity 1 76 0 2220 95 17 7 chr10 103186627 103186922 -37129843 + AluSq SINE Alu 1 298 -15 1081 100 18 0 chr10 103186928 103187098 -37129667 - L1MB7 LINE L1 0 6184 6012 482 290 13 19 chr10 103187568 103187723 -37129042 - MIR SINE MIR -31 231 78 213 194 0 0 chr10 103188204 103188240 -37128525 + (CA)n Simple_repeat Simple_repeat 2 37 0 314 286 165 15 chr10 103188811 103188944 -37127821 + MER5A DNA MER1_type 16 168 -21 * 362 329 44 48 chr10 103188941 103189190 -37127575 - L3 LINE CR1 -64 1513 1266 332 304 93 50 chr10 103189703 103189864 -37126901 + MIR SINE MIR 36 203 -59 204 313 202 29 chr10 103189990 103190119 -37126646 + MIR SINE MIR 8 113 -149 186 43 0 0 chr10 103190119 103190142 -37126623 + (ATG)n Simple_repeat Simple_repeat 2 24 0 204 313 202 29 chr10 103190142 103190220 -37126545 + MIR SINE MIR 113 251 -11 4300 75 3 2 chr10 103190257 103190831 -37125934 + L1PA8 LINE L1 5598 6172 0 198 316 63 0 chr10 103190908 103190987 -37125778 + L3b LINE CR1 1252 1335 -248 303 341 114 0 chr10 103191113 103191236 -37125529 + L3b LINE CR1 1362 1498 -85 646 252 82 19 chr10 103191569 103191775 -37124990 - MIR SINE MIR -41 221 3 382 345 29 29 chr10 103191967 103192141 -37124624 - MIR SINE MIR -72 190 17 425 301 41 29 chr10 103192147 103192393 -37124372 + L1ME4a LINE L1 5850 6098 -23 2704 186 45 7 chr10 103192396 103192967 -37123798 - L1MB8 LINE L1 0 6178 5586 180 0 0 0 chr10 103192994 103193014 -37123751 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2477 63 3 0 chr10 103193252 103193554 -37123211 - AluY SINE Alu -8 303 1 3649 149 53 18 chr10 103193641 103194095 -37122670 - Tigger3b DNA MER2_type -1798 1231 741 2170 118 0 10 chr10 103194095 103194423 -37122342 - AluSx SINE Alu 0 312 1 3649 149 53 18 chr10 103194423 103194691 -37122074 - Tigger3b DNA MER2_type -2288 741 484 1007 119 0 0 chr10 103194691 103194834 -37121931 + AluSg/x SINE Alu 170 312 0 2378 146 59 25 chr10 103194836 103195309 -37121456 - Tigger3b DNA MER2_type -742 489 1 268 277 80 9 chr10 103196267 103196379 -37120386 + L2 LINE L2 3183 3302 -11 2000 142 14 0 chr10 103196661 103196956 -37119809 + AluSx SINE Alu 1 299 -13 532 267 151 4 chr10 103196982 103197240 -37119525 - MER102a DNA MER1_type 0 330 35 2701 237 88 7 chr10 103197241 103198074 -37118691 - L1ME3A LINE L1 -31 6139 5242 1959 98 0 0 chr10 103198074 103198320 -37118445 - AluSc SINE Alu -63 246 1 1887 336 47 16 chr10 103198323 103198739 -37118026 - L1ME3A LINE L1 -960 5186 4784 2281 87 0 10 chr10 103198739 103199037 -37117728 - AluY SINE Alu -14 297 3 1887 336 47 16 chr10 103199037 103199600 -37117165 - L1ME3A LINE L1 -1362 4784 4177 23 0 0 0 chr10 103199884 103199907 -37116858 + AT_rich Low_complexity Low_complexity 1 23 0 233 183 0 14 chr10 103200278 103200349 -37116416 - L1ME4a LINE L1 -4 6117 6048 313 295 172 25 chr10 103201105 103201227 -37115538 - MIR3 SINE MIR -48 160 21 832 161 12 6 chr10 103203172 103203340 -37113425 - MER104 DNA Tc2 -7 173 5 603 159 223 25 chr10 103203550 103203643 -37113122 - MIR SINE MIR -12 250 177 270 0 0 0 chr10 103203643 103203673 -37113092 + (ATG)n Simple_repeat Simple_repeat 2 31 0 603 159 223 25 chr10 103203673 103203736 -37113029 - MIR SINE MIR -85 177 63 369 318 11 74 chr10 103203966 103204142 -37112623 - MER5A DNA MER1_type -2 187 23 508 196 8 75 chr10 103204151 103204284 -37112481 - LTR67 LTR ERVL 0 557 434 292 325 46 71 chr10 103204412 103204609 -37112156 - MLT1K LTR MaLR -394 194 3 1817 138 0 72 chr10 103205058 103205193 -37111572 + AluJo SINE Alu 1 144 -168 2401 70 3 23 chr10 103205193 103205494 -37111271 + AluY SINE Alu 1 295 -16 1817 138 0 72 chr10 103205494 103205677 -37111088 + AluJo SINE Alu 144 296 -16 400 288 76 44 chr10 103206612 103206862 -37109903 - MIR SINE MIR 0 262 5 2166 137 0 0 chr10 103207332 103207632 -37109133 - AluSx SINE Alu -12 300 1 370 318 55 0 chr10 103207848 103207958 -37108807 + L2 LINE L2 3115 3230 -42 210 37 0 0 chr10 103208113 103208140 -37108625 + (TG)n Simple_repeat Simple_repeat 2 28 0 45065 38 1 3 chr10 103208148 103211222 -37105543 - L1PA3 LINE L1 0 6155 3100 2712 23 0 10 chr10 103211222 103211531 -37105234 - AluY SINE Alu -5 306 1 45065 38 1 3 chr10 103211531 103214625 -37102140 - L1PA3 LINE L1 -3055 3100 1 2064 143 3 10 chr10 103215828 103216136 -37100629 + AluJb SINE Alu 1 306 -6 750 206 52 16 chr10 103216167 103216361 -37100404 + L1MB7 LINE L1 5825 6025 -159 323 186 68 0 chr10 103216361 103216420 -37100345 + Tigger2 DNA MER2_type 1 63 -2655 876 144 8 0 chr10 103216420 103216552 -37100213 + AluSq/x SINE Alu 2 134 -179 1853 120 4 8 chr10 103216554 103216812 -37099953 + AluSc SINE Alu 1 257 -52 937 251 190 15 chr10 103216914 103217386 -37099379 + L1ME LINE L1 5244 5802 -368 1377 132 15 0 chr10 103217392 103217628 -37099137 - AluSg/x SINE Alu 0 314 76 1899 155 40 9 chr10 103217628 103217957 -37098808 - L1MB3 LINE L1 -156 6027 5689 529 343 118 23 chr10 103270017 103270457 -37046308 + L2 LINE L2 2147 2628 -686 2057 113 0 47 chr10 103270528 103270857 -37045908 + AluSq SINE Alu 1 315 0 1064 284 43 35 chr10 103270872 103271389 -37045376 + L1MC4 LINE L1 7447 7967 -75 266 210 136 25 chr10 103271762 103271843 -37044922 - MIR SINE MIR -57 205 116 3031 181 52 38 chr10 103272375 103273068 -37043697 + MER54A LTR ERVL 6 901 0 393 227 25 59 chr10 103273086 103273205 -37043560 + MIR3 SINE MIR 91 205 -3 226 360 108 0 chr10 103274072 103274183 -37042582 - L2 LINE L2 0 3272 3150 210 250 0 0 chr10 103275162 103275202 -37041563 + L2 LINE L2 3009 3048 -265 725 230 219 34 chr10 103275237 103275589 -37041176 + MLT1J2 LTR MaLR 34 450 0 192 40 0 0 chr10 103275665 103275690 -37041075 + (T)n Simple_repeat Simple_repeat 1 25 0 1228 282 75 34 chr10 103275911 103276536 -37040229 + L1ME4a LINE L1 5313 5963 -158 25 95 0 0 chr10 103276570 103276644 -37040121 + AT_rich Low_complexity Low_complexity 1 74 0 1310 225 14 51 chr10 103276704 103277117 -37039648 + L1M4 LINE L1 4457 4854 -1292 198 91 0 0 chr10 103277282 103277315 -37039450 + (T)n Simple_repeat Simple_repeat 1 33 0 43041 32 21 1 chr10 103277319 103283351 -37033414 - L1HS LINE L1 -2 6153 1 756 256 46 27 chr10 103283352 103283571 -37033194 + L2 LINE L2 3091 3313 0 1038 304 48 15 chr10 103283818 103284154 -37032611 - LTR16A LTR ERVL -103 347 1 749 181 32 27 chr10 103284180 103284368 -37032397 + MER53 DNA DNA 1 189 0 1185 160 19 5 chr10 103284529 103284735 -37032030 - L1MA7 LINE L1 -456 5835 5627 * 2053 134 42 72 chr10 103284725 103285181 -37031584 + L1MA7 LINE L1 5850 6291 0 737 305 62 69 chr10 103287826 103288351 -37028414 - L2 LINE L2 0 3313 2804 1108 217 131 30 chr10 103288455 103288623 -37028142 - L1MC4 LINE L1 -220 7822 7672 2029 136 0 13 chr10 103288623 103288924 -37027841 - AluSx SINE Alu -15 297 1 1108 217 131 30 chr10 103288924 103289151 -37027614 - L1MC4 LINE L1 -370 7672 7387 198 0 0 0 chr10 103289344 103289366 -37027399 + (GGGGA)n Simple_repeat Simple_repeat 2 23 0 669 110 0 0 chr10 103289370 103289470 -37027295 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 20552 158 29 45 chr10 103289470 103291941 -37024824 + L1MA3 LINE L1 12 2523 -5201 2451 80 0 3 chr10 103291941 103292253 -37024512 + AluY SINE Alu 1 311 0 20552 158 29 45 chr10 103292253 103294465 -37022300 + L1MA3 LINE L1 2523 4771 -2953 1790 169 3 3 chr10 103294465 103294755 -37022010 + AluJo SINE Alu 1 290 -22 20552 158 29 45 chr10 103294755 103296697 -37020068 + L1MA3 LINE L1 4771 6744 -980 9640 22 0 0 chr10 103296697 103298601 -37018164 - L1PA3 LINE L1 -1 6154 4254 20552 158 29 45 chr10 103298601 103299561 -37017204 + L1MA3 LINE L1 6744 7464 -260 895 63 94 0 chr10 103299561 103299688 -37017077 - MER85 DNA T2_type 0 139 1 20552 158 29 45 chr10 103299688 103299944 -37016821 + L1MA3 LINE L1 7464 7723 -1 26 30 0 0 chr10 103300040 103300073 -37016692 + AT_rich Low_complexity Low_complexity 1 33 0 296 304 135 7 chr10 103300438 103300586 -37016179 - L3 LINE CR1 -436 1141 975 359 257 46 28 chr10 103300600 103300709 -37016056 - MIR3 SINE MIR -15 193 83 475 218 56 9 chr10 103300820 103300968 -37015797 + MIR SINE MIR 21 190 -72 2376 71 0 10 chr10 103301241 103301536 -37015229 + AluSg SINE Alu 1 292 -18 464 120 76 0 chr10 103301604 103301696 -37015069 - L1MB3 LINE L1 -1 6182 6084 233 263 281 0 chr10 103301818 103301932 -37014833 + MIR SINE MIR 111 256 -6 199 279 135 61 chr10 103302466 103302695 -37014070 + L2 LINE L2 2220 2465 -849 426 139 139 37 chr10 103303611 103303719 -37013046 + L1MC5 LINE L1 7794 7912 -49 201 154 0 0 chr10 103303886 103303925 -37012840 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 730 161 21 7 chr10 103304645 103304788 -37011977 - MER69 DNA AcHobo 0 2526 2382 280 277 0 48 chr10 103304889 103304972 -37011793 - MER69 DNA AcHobo -1140 86 8 250 311 0 0 chr10 103304973 103305034 -37011731 + L2 LINE L2 3223 3283 -30 471 99 0 14 chr10 103305034 103305105 -37011660 + MER30 DNA MER1_type 1 70 -160 514 330 199 19 chr10 103305366 103305778 -37010987 + L2 LINE L2 2827 3312 -1 258 253 42 63 chr10 103305896 103305991 -37010774 - MIR SINE MIR 0 262 170 1079 261 55 10 chr10 103305998 103306400 -37010365 - L1M4 LINE L1 -1495 4651 4232 226 267 22 33 chr10 103306687 103306830 -37009935 - MER5A DNA MER1_type 0 189 2 543 146 153 15 chr10 103306855 103306992 -37009773 - Charlie5 DNA MER1_type 0 2624 2469 390 174 0 14 chr10 103306990 103307059 -37009706 - Charlie5 DNA MER1_type -2542 70 3 * 188 349 24 36 chr10 103307150 103307233 -37009532 - MER5A DNA MER1_type -40 149 68 494 318 104 10 chr10 103308253 103308445 -37008320 - MIR SINE MIR -44 218 9 451 272 38 22 chr10 103308494 103308678 -37008087 - L1M4 LINE L1 -1713 4433 4247 236 311 45 38 chr10 103309221 103309314 -37007451 + L1ME LINE L1 137 233 -5972 1475 151 24 50 chr10 103309314 103309612 -37007153 + AluJo SINE Alu 1 290 -22 236 311 45 38 chr10 103309612 103309650 -37007115 + L1ME LINE L1 233 269 -5936 575 256 8 0 chr10 103310055 103310176 -37006589 + MLT2E LTR ERVL 1 122 -506 2807 30 0 3 chr10 103310176 103310511 -37006254 + L1PA4 LINE L1 5819 6152 -3 223 49 49 0 chr10 103310571 103310612 -37006153 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 28 0 0 0 chr10 103311189 103311217 -37005548 + AT_rich Low_complexity Low_complexity 1 28 0 1259 208 13 0 chr10 103312251 103312487 -37004278 + MER8 DNA MER2_type 1 239 0 1860 173 24 21 chr10 103312558 103312894 -37003871 - MER1B DNA MER1_type 0 337 1 432 345 49 32 chr10 103314406 103314812 -37001953 + MER89-int LTR ERV1 172 584 -4063 293 274 51 8 chr10 103315474 103315591 -37001174 + MER89-int LTR ERV1 3387 3508 -3293 1629 159 80 15 chr10 103315744 103316070 -37000695 - MER7A DNA MER2_type 0 346 2 609 267 39 14 chr10 103317069 103317350 -36999415 + L1ME LINE L1 2173 2460 -3936 1895 200 66 60 chr10 103317368 103317870 -36998895 + MLT1D LTR MaLR 1 624 0 1887 149 3 23 chr10 103317899 103318200 -36998565 + AluJo SINE Alu 3 297 -15 855 256 157 10 chr10 103318201 103318693 -36998072 + L1ME LINE L1 2451 3014 -3201 * 930 201 21 73 chr10 103318692 103318980 -36997785 + L1ME3A LINE L1 5894 6166 -4 183 345 48 24 chr10 103319097 103319181 -36997584 + MIR3 SINE MIR 120 205 -3 393 358 41 0 chr10 103319508 103319631 -36997134 - L2 LINE L2 -1 3271 3144 276 274 83 12 chr10 103319968 103320052 -36996713 + L2 LINE L2 2966 3055 -258 910 255 228 40 chr10 103320200 103320600 -36996165 + MLT1L LTR MaLR 130 604 -11 718 233 122 6 chr10 103320629 103320809 -36995956 + L2 LINE L2 3113 3313 0 929 280 86 82 chr10 103321013 103321426 -36995339 + MLT1G1 LTR MaLR 73 483 -112 1726 180 0 10 chr10 103321426 103321721 -36995044 + AluJo SINE Alu 1 292 -20 929 280 86 82 chr10 103321721 103321771 -36994994 + MLT1G1 LTR MaLR 483 531 -64 2299 88 0 3 chr10 103321771 103322067 -36994698 - AluY SINE Alu -16 295 1 929 280 86 82 chr10 103322067 103322123 -36994642 + MLT1G1 LTR MaLR 531 595 0 1963 158 50 62 chr10 103322357 103322774 -36993991 + MLT2D LTR ERVL 1 412 -2 313 327 93 13 chr10 103322819 103323010 -36993755 - MIR SINE MIR -56 206 3 4655 137 48 34 chr10 103323057 103323809 -36992956 + L1MB3 LINE L1 5280 6048 -135 2099 110 24 0 chr10 103323809 103324100 -36992665 + AluSg SINE Alu 1 298 -12 4655 137 48 34 chr10 103324100 103324236 -36992529 + L1MB3 LINE L1 6048 6181 -2 22 56 0 0 chr10 103324395 103324431 -36992334 + AT_rich Low_complexity Low_complexity 1 36 0 1044 112 0 31 chr10 103324431 103324592 -36992173 - L1PA8A LINE L1 -9 6122 5967 378 91 0 0 chr10 103324637 103324692 -36992073 + (TTCA)n Simple_repeat Simple_repeat 1 55 0 351 279 147 5 chr10 103324704 103324908 -36991857 - L2 LINE L2 -6 3307 3075 521 277 27 21 chr10 103326196 103326384 -36990381 - MER5A DNA MER1_type 0 189 1 654 238 42 30 chr10 103328051 103328219 -36988546 - MIR SINE MIR -2 260 91 434 278 83 17 chr10 103328219 103328399 -36988366 + MLT1J1 LTR MaLR 1 192 -254 555 245 7 7 chr10 103328573 103328712 -36988053 - MER104 DNA Tc2 -15 165 27 1106 202 45 76 chr10 103328737 103329133 -36987632 + L1MC5 LINE L1 6856 7239 -722 257 237 203 0 chr10 103329199 103329258 -36987507 + Charlie1 DNA MER1_type 1 71 -2690 * 1838 158 30 58 chr10 103329256 103329687 -36987078 + Charlie1 DNA MER1_type 2343 2761 0 668 221 55 51 chr10 103329687 103329922 -36986843 + L1MC5 LINE L1 7291 7526 -435 255 272 97 18 chr10 103330046 103330160 -36986605 + L1ME3 LINE L1 5988 6110 -52 1075 177 62 14 chr10 103330406 103330843 -36985922 + LTR54B LTR ERV1 1 490 -8 946 230 42 75 chr10 103331107 103331321 -36985444 - MLT2C1 LTR ERVL -73 324 122 2087 104 0 21 chr10 103331321 103331641 -36985124 + AluSg SINE Alu 1 314 0 946 230 42 75 chr10 103331641 103331760 -36985005 - MLT2C1 LTR ERVL -275 122 1 2490 54 0 0 chr10 103332155 103332453 -36984312 + AluY SINE Alu 1 298 -13 656 294 35 15 chr10 103332736 103332937 -36983828 + MIR SINE MIR 29 233 -29 260 207 69 0 chr10 103333009 103333067 -36983698 - AluJb SINE Alu -155 147 86 1306 163 4 35 chr10 103333067 103333294 -36983471 - AluJo SINE Alu -92 220 1 271 344 179 0 chr10 103334529 103334680 -36982085 - MIR3 SINE MIR -36 172 26 615 329 50 27 chr10 103334910 103335311 -36981454 - L2 LINE L2 -568 2746 2337 225 302 38 28 chr10 103335305 103335411 -36981354 + L3 LINE CR1 1167 1273 -304 * 1632 145 69 7 chr10 103335556 103335832 -36980933 + AluSx SINE Alu 1 293 -19 2324 71 7 7 chr10 103336371 103336666 -36980099 - AluSc SINE Alu -14 295 1 365 140 0 0 chr10 103336698 103336755 -36980010 - L1MC1 LINE L1 -224 6109 6053 2658 164 29 2 chr10 103337116 103337597 -36979168 - L1MC1 LINE L1 -23 6310 5817 2022 80 10 27 chr10 103337598 103337899 -36978866 - L1PA13 LINE L1 -4 6159 5864 665 181 31 0 chr10 103338638 103338765 -36978000 + MIR3 SINE MIR 67 197 -11 236 345 0 0 chr10 103339187 103339242 -36977523 + MIR SINE MIR 70 124 -84 313 316 32 44 chr10 103339253 103339411 -36977354 - MIR SINE MIR 0 262 107 604 231 80 76 chr10 103340016 103340267 -36976498 - MARNA DNA Mariner -329 257 6 216 152 0 43 chr10 103341200 103341246 -36975519 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 781 212 0 0 chr10 103341301 103341433 -36975332 - FLAM_A SINE Alu -1 132 1 636 294 156 5 chr10 103341842 103342060 -36974705 - MIR SINE MIR 0 262 12 308 298 8 50 chr10 103342126 103342247 -36974518 + MER117 DNA MER1_type 82 197 0 2228 112 0 7 chr10 103342698 103343001 -36973764 + AluSx SINE Alu 1 301 -11 187 338 150 8 chr10 103343465 103343598 -36973167 - L2 LINE L2 -5 3267 3116 310 263 13 0 chr10 103343642 103343718 -36973047 - MIR SINE MIR -110 152 76 2271 79 7 0 chr10 103344315 103344606 -36972159 - AluSx SINE Alu -19 293 1 2577 49 0 3 chr10 103345017 103345321 -36971444 + AluY SINE Alu 1 303 -8 184 205 26 0 chr10 103346545 103346584 -36970181 - MER5C DNA MER1_type -254 70 31 486 49 0 0 chr10 103346676 103346737 -36970028 + (TG)n Simple_repeat Simple_repeat 2 62 0 1654 136 31 88 chr10 103346739 103346960 -36969805 + MER39 LTR ERV1 24 256 -451 511 217 75 0 chr10 103346960 103347066 -36969699 - FLAM_A SINE Alu -19 114 1 1654 136 31 88 chr10 103347066 103347266 -36969499 + MER39 LTR ERV1 256 523 -184 256 174 43 14 chr10 103347271 103347340 -36969425 + MER21B LTR ERV1 793 863 0 266 305 11 11 chr10 103348013 103348108 -36968657 + CT-rich Low_complexity Low_complexity 1 95 0 311 283 26 35 chr10 103348315 103348428 -36968337 + MIR SINE MIR 57 168 -94 208 278 187 66 chr10 103349107 103349348 -36967417 - L2 LINE L2 -7 3306 3037 2376 267 115 78 chr10 103349495 103350909 -36965856 + L1MCc LINE L1 17 1483 -4940 445 237 68 68 chr10 103350925 103351199 -36965566 + L1MCc LINE L1 1873 2149 -4792 560 111 121 0 chr10 103351199 103351298 -36965467 + L1MB3 LINE L1 6062 6172 -11 445 237 68 68 chr10 103351298 103351344 -36965421 + L1MCc LINE L1 2148 2193 -4748 190 174 0 65 chr10 103351623 103351669 -36965096 - L3 LINE CR1 -5 1572 1530 403 252 72 0 chr10 103352600 103352711 -36964054 - MIR SINE MIR -60 202 84 972 191 0 0 chr10 103353484 103353652 -36963113 - FRAM SINE Alu -4 172 5 736 202 37 64 chr10 103353687 103353875 -36962890 + MER58B DNA MER1_type 152 334 -7 2575 190 45 54 chr10 103353877 103354379 -36962386 + MLT2B3 LTR ERVL 1 499 -55 1963 132 40 3 chr10 103354379 103354705 -36962060 + MER44D DNA MER2_type 1 608 -1 2575 190 45 54 chr10 103354705 103354761 -36962004 + MLT2B3 LTR ERVL 499 554 0 184 238 0 0 chr10 103354955 103354997 -36961768 + L2 LINE L2 2933 2974 -298 767 225 122 24 chr10 103355042 103355255 -36961510 - MIR SINE MIR -17 245 12 189 298 194 24 chr10 103356921 103357045 -36959720 + MIR SINE MIR 32 176 -86 1485 190 10 24 chr10 103357332 103357627 -36959138 - AluJo SINE Alu -21 291 1 205 162 0 0 chr10 103357918 103357955 -36958810 + (TG)n Simple_repeat Simple_repeat 1 37 0 865 173 40 89 chr10 103358788 103359036 -36957729 - MER106A DNA MER1_type 0 236 1 251 219 229 21 chr10 103359046 103359142 -36957623 - MIR SINE MIR -55 207 92 4263 258 75 22 chr10 103359882 103361532 -36955233 + L1MEc LINE L1 35 1803 -4593 544 312 16 11 chr10 103361555 103361744 -36955021 + L1MEc LINE L1 141 330 -6066 6862 92 15 22 chr10 103361780 103362341 -36954424 + L1MA2 LINE L1 5216 5774 -530 2075 117 13 7 chr10 103362341 103362690 -36954075 + AluSx SINE Alu 1 351 0 6862 92 15 22 chr10 103362690 103363218 -36953547 + L1MA2 LINE L1 5774 6304 0 677 241 78 66 chr10 103363250 103363900 -36952865 - L1M4 LINE L1 -3091 3055 2398 450 306 35 56 chr10 103363907 103364191 -36952574 + MARNA DNA Mariner 43 320 -266 277 323 0 43 chr10 103364293 103364386 -36952379 + MIR SINE MIR 42 130 -78 270 284 172 0 chr10 103365195 103365311 -36951454 + MIR SINE MIR 48 183 -79 1799 155 60 81 chr10 103365316 103365735 -36951030 + MSTB LTR MaLR 1 410 -16 31 26 0 0 chr10 103366050 103366088 -36950677 + AT_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr10 103366132 103366160 -36950605 + AT_rich Low_complexity Low_complexity 1 28 0 180 305 125 0 chr10 103366205 103366333 -36950432 - L2 LINE L2 -239 3033 2890 305 259 37 12 chr10 103367366 103367447 -36949318 + L2 LINE L2 3185 3267 -5 411 228 16 71 chr10 103367662 103367789 -36948976 - MER113 DNA MER1_type? -3 518 399 6156 76 19 5 chr10 103367814 103368943 -36947822 - L1PA8A LINE L1 -19 6112 4983 4796 107 7 0 chr10 103368943 103369626 -36947139 - L1PA8A LINE L1 -1758 4388 3701 4339 119 3 1 chr10 103369623 103370305 -36946460 + L1PA8A LINE L1 3019 3701 -2445 * 416 232 69 57 chr10 103370383 103370471 -36946294 - MER113 DNA MER1_type? -242 279 194 428 287 78 25 chr10 103370471 103370715 -36946050 + MIR SINE MIR 3 259 -3 416 232 69 57 chr10 103370715 103370872 -36945893 - MER113 DNA MER1_type? -327 194 31 330 182 15 30 chr10 103371002 103371068 -36945697 + L2 LINE L2 3208 3272 0 23 33 0 0 chr10 103371849 103371879 -36944886 + AT_rich Low_complexity Low_complexity 1 30 0 597 305 79 0 chr10 103371973 103372176 -36944589 + MIR SINE MIR 40 258 -4 294 263 61 26 chr10 103372384 103372498 -36944267 - L2 LINE L2 -5 3308 3191 546 278 120 5 chr10 103372604 103372795 -36943970 + L1MEc LINE L1 37 249 -6147 292 224 17 0 chr10 103372845 103372903 -36943862 - L2 LINE L2 -210 3062 3004 405 260 68 41 chr10 103372908 103373054 -36943711 - L2 LINE L2 -2 3311 3162 1028 325 114 28 chr10 103373062 103373779 -36942986 - L2 LINE L2 -337 2977 2199 365 57 0 19 chr10 103374405 103374458 -36942307 + (TG)n Simple_repeat Simple_repeat 2 53 0 187 308 90 0 chr10 103375037 103375115 -36941650 + MIR SINE MIR 52 136 -126 362 312 256 14 chr10 103375886 103376316 -36940449 + L3 LINE CR1 643 1176 -401 239 278 41 31 chr10 103376425 103376522 -36940243 + MLT1I LTR MaLR 21 118 -291 283 256 120 26 chr10 103376776 103376893 -36939872 + MLT1H LTR MaLR 409 536 -13 254 247 173 0 chr10 103376918 103376999 -36939766 - MLT1I LTR MaLR -34 375 281 * 362 301 77 48 chr10 103376988 103377297 -36939468 - MLT1I LTR MaLR -180 369 50 398 328 56 20 chr10 103377360 103377555 -36939210 - MIR SINE MIR -51 211 10 502 332 127 62 chr10 103377569 103377955 -36938810 + L3 LINE CR1 1166 1576 -1 1794 166 10 7 chr10 103378087 103378389 -36938376 + AluJo SINE Alu 1 303 -9 11391 134 24 46 chr10 103378389 103380440 -36936325 + Tigger1 DNA MER2_type 412 2417 -1 181 354 0 0 chr10 103381189 103381254 -36935511 - L2 LINE L2 0 3313 3249 254 96 19 19 chr10 103382451 103382503 -36934262 + L1PA3 LINE L1 6104 6155 0 857 88 31 56 chr10 103382512 103382672 -36934093 + L1MA1 LINE L1 6048 6203 -99 354 23 0 0 chr10 103382696 103382739 -36934026 + (CA)n Simple_repeat Simple_repeat 2 44 0 400 256 238 6 chr10 103383051 103383211 -36933554 + MIR SINE MIR 49 245 -17 695 200 0 8 chr10 103383473 103383598 -36933167 + FLAM_C SINE Alu 1 124 -9 1382 146 68 84 chr10 103383764 103384072 -36932693 - AluJo SINE Alu -9 303 1 214 305 143 19 chr10 103384244 103384349 -36932416 + MIR3 SINE MIR 87 204 -4 404 256 120 43 chr10 103384763 103385064 -36931701 + L1ME4a LINE L1 5617 5940 -181 202 204 37 19 chr10 103385182 103385236 -36931529 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr10 103386004 103386028 -36930737 + AT_rich Low_complexity Low_complexity 1 24 0 1464 209 0 24 chr10 103386031 103386318 -36930447 - AluJo SINE Alu -30 282 3 1863 146 0 4 chr10 103386354 103386635 -36930130 - AluJb SINE Alu -32 280 1 232 301 0 48 chr10 103386997 103387080 -36929685 - L2 LINE L2 -5 3308 3230 405 286 9 9 chr10 103387497 103387602 -36929163 - MIR SINE MIR -20 242 138 2239 113 3 3 chr10 103387623 103387932 -36928833 - AluSp SINE Alu -4 309 1 1649 269 77 71 chr10 103388121 103389635 -36927130 + L1MEd LINE L1 7 1622 -868 4060 35 0 0 chr10 103390183 103390663 -36926102 + L1PA3 LINE L1 5676 6155 0 262 328 25 0 chr10 103390919 103391041 -36925724 + ERVL LTR ERVL 1085 1209 -4555 1248 261 99 7 chr10 103391045 103391592 -36925173 + L1MC3 LINE L1 2957 3553 -2576 2195 97 3 3 chr10 103391593 103391904 -36924861 + L1PB2 LINE L1 5838 6148 -3 3030 187 63 24 chr10 103391912 103393350 -36923415 + L1MC3 LINE L1 4626 5386 -743 864 226 62 3 chr10 103393346 103393634 -36923131 + L1ME1 LINE L1 4775 5079 -1067 * 825 264 15 10 chr10 103393634 103393835 -36922930 - MER58A DNA MER1_type -8 216 15 3255 191 33 34 chr10 103393863 103394324 -36922441 + L1ME1 LINE L1 5127 5585 -581 1569 95 20 63 chr10 103394324 103394576 -36922189 - AluSg/x SINE Alu 0 312 72 3255 191 33 34 chr10 103394576 103395035 -36921730 + L1ME1 LINE L1 5585 6043 -123 346 165 44 22 chr10 103395117 103395208 -36921557 + L1MA10 LINE L1 6241 6333 -1 2834 232 48 9 chr10 103395248 103395941 -36920824 + L1ME1 LINE L1 5457 6333 -1 526 311 136 0 chr10 103395987 103396244 -36920521 - L3 LINE CR1 -48 1529 1238 700 302 60 17 chr10 103396247 103396482 -36920283 + MIR SINE MIR 1 245 -17 339 292 125 7 chr10 103397059 103397203 -36919562 + MIR3 SINE MIR 37 197 -11 2722 179 33 5 chr10 103397440 103398009 -36918756 + L1MB8 LINE L1 5587 6171 -7 479 340 26 7 chr10 103398251 103398404 -36918361 - L2 LINE L2 0 3272 3117 373 268 73 8 chr10 103398502 103398625 -36918140 + MIR SINE MIR 73 203 -59 2066 29 0 0 chr10 103399726 103399971 -36916794 - L1PA2 LINE L1 -2 6153 5909 21 0 0 0 chr10 103400236 103400257 -36916508 + AT_rich Low_complexity Low_complexity 1 21 0 1453 229 117 27 chr10 103400467 103400868 -36915897 + LTR16A LTR ERVL 12 448 -2 2227 109 0 0 chr10 103401188 103401482 -36915283 + AluSc SINE Alu 1 294 -15 511 243 90 14 chr10 103401552 103401696 -36915069 - MIR SINE MIR -18 244 90 700 212 0 15 chr10 103401919 103402051 -36914714 + FLAM_A SINE Alu 1 130 -3 528 320 61 22 chr10 103402189 103402420 -36914345 + MIR SINE MIR 9 248 -14 420 221 212 0 chr10 103402677 103402790 -36913975 - MIR SINE MIR -26 236 100 2440 88 3 0 chr10 103402966 103403274 -36913491 + AluSp SINE Alu 1 309 -4 264 304 38 0 chr10 103403317 103403396 -36913369 + L1ME4a LINE L1 5955 6036 -85 631 264 123 56 chr10 103403427 103403802 -36912963 + MLT1J2 LTR MaLR 31 430 -20 2281 93 3 13 chr10 103403913 103404225 -36912540 + AluSg SINE Alu 1 309 -1 377 282 64 30 chr10 103404243 103404445 -36912320 + L1ME3A LINE L1 5610 5818 -303 320 240 209 0 chr10 103404969 103405098 -36911667 + L1ME3A LINE L1 6007 6162 -8 255 384 107 38 chr10 103405806 103406199 -36910566 - L2 LINE L2 -42 3230 2811 430 282 149 11 chr10 103406424 103406618 -36910147 + MIR SINE MIR 37 255 -7 4614 96 36 7 chr10 103406948 103407649 -36909116 + L1MA2 LINE L1 5584 6304 0 2435 109 5 35 chr10 103408600 103408975 -36907790 + THE1B LTR MaLR 1 364 0 235 65 0 43 chr10 103409226 103409272 -36907493 + L1MA6 LINE L1 6257 6300 0 244 267 153 23 chr10 103409508 103409639 -36907126 + L1ME4a LINE L1 5882 6029 -92 2322 103 0 0 chr10 103409710 103410011 -36906754 - AluY SINE Alu -10 301 1 284 279 221 0 chr10 103412099 103412221 -36904544 + MIR SINE MIR 102 250 -12 185 176 0 39 chr10 103412286 103412337 -36904428 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 5226 20 0 0 chr10 103412809 103413405 -36903360 + L1PA3 LINE L1 5558 6153 -2 335 308 0 0 chr10 103413493 103413571 -36903194 - L2 LINE L2 -9 3263 3186 410 365 103 29 chr10 103413834 103414174 -36902591 - L2 LINE L2 -436 2878 2514 1418 245 12 90 chr10 103414524 103415026 -36901739 + LTR16B LTR ERVL 2 464 0 209 203 14 29 chr10 103415135 103415204 -36901561 - L3b LINE CR1 -165 1418 1351 679 296 11 26 chr10 103415562 103415826 -36900939 + MIR SINE MIR 2 261 -1 977 161 66 58 chr10 103416542 103416816 -36899949 - MER33 DNA MER1_type -2 322 47 204 231 0 0 chr10 103416921 103416973 -36899792 + CT-rich Low_complexity Low_complexity 2 53 0 1254 241 62 155 chr10 103417555 103419484 -36897281 + L1MDb LINE L1 811 2575 -4012 2023 85 0 44 chr10 103419492 103419785 -36896980 + AluSx SINE Alu 1 280 -32 183 42 0 0 chr10 103419790 103419814 -36896951 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2619 168 29 2 chr10 103420008 103420489 -36896276 + L1MC1 LINE L1 5817 6310 -23 365 140 0 0 chr10 103420850 103420907 -36895858 + L1MC1 LINE L1 6053 6109 -224 2394 63 7 7 chr10 103420939 103421240 -36895525 + AluSc SINE Alu 1 301 -8 184 205 26 0 chr10 103422465 103422504 -36894261 - MER5C DNA MER1_type -254 70 31 360 0 0 0 chr10 103422596 103422636 -36894129 + (TG)n Simple_repeat Simple_repeat 1 40 0 1926 126 18 0 chr10 103422958 103423262 -36893503 - AluSx SINE Alu 0 309 1 186 301 60 12 chr10 103423290 103423373 -36893392 - MIR SINE MIR -73 135 49 190 300 0 20 chr10 103423426 103423476 -36893289 - L2 LINE L2 -11 3261 3213 275 228 37 37 chr10 103424094 103424256 -36892509 + (TATATG)n Simple_repeat Simple_repeat 1 162 0 * 406 184 36 28 chr10 103424204 103424567 -36892198 + (TA)n Simple_repeat Simple_repeat 1 365 0 5652 33 6 0 chr10 103424898 103425604 -36891161 - L1P LINE L1 -2992 3154 2445 7739 17 2 0 chr10 103425604 103427291 -36889474 + L1PA4 LINE L1 4465 6153 -2 335 308 0 0 chr10 103427379 103427457 -36889308 - L2 LINE L2 -9 3263 3186 410 365 103 29 chr10 103427720 103428060 -36888705 - L2 LINE L2 -436 2878 2514 1402 246 12 88 chr10 103428411 103428912 -36887853 + LTR16B LTR ERVL 2 464 0 209 203 14 29 chr10 103429021 103429090 -36887675 - L3b LINE CR1 -165 1418 1351 907 153 71 15 chr10 103429548 103429744 -36887021 - MER33 DNA MER1_type -115 209 3 614 335 41 56 chr10 103429801 103430192 -36886573 + LTR67 LTR ERVL 1 385 -172 10637 125 83 29 chr10 103430195 103432029 -36884736 - L1M1 LINE L1 -4263 3302 1370 3422 206 9 41 chr10 103432027 103432783 -36883982 - L1M1 LINE L1 -6820 745 14 * 2440 261 69 11 chr10 103432779 103433521 -36883244 - L1MDa LINE L1 -5514 1026 19 * 3905 37 10 0 chr10 103434281 103434763 -36882002 - L1P LINE L1 -3215 2931 2445 7790 9 5 1 chr10 103434763 103436480 -36880285 + L1PA3 LINE L1 4465 6155 0 1310 225 14 51 chr10 103436650 103437063 -36879702 - L1M4 LINE L1 -1292 4854 4457 310 343 79 17 chr10 103438056 103438234 -36878531 + MIR3 SINE MIR 2 190 -18 240 268 0 18 chr10 103438301 103438357 -36878408 + MER58 DNA MER1_type 3 57 -2363 4245 248 94 51 chr10 103438385 103440066 -36876699 + L1M3e LINE L1 1 1753 -5277 7576 154 13 6 chr10 103440182 103441521 -36875244 - L1P LINE L1 -1331 4815 3467 252 218 18 18 chr10 103441638 103441693 -36875072 - L2 LINE L2 -9 3263 3209 395 263 11 0 chr10 103441993 103442088 -36874677 + MIR3 SINE MIR 99 194 -14 3068 91 7 5 chr10 103443624 103444055 -36872710 - LTR13 LTR ERVK -575 432 1 6111 114 25 9 chr10 103444055 103445035 -36871730 + L1MA1 LINE L1 5308 6302 0 3660 136 78 15 chr10 103446329 103447012 -36869753 - Tigger3b DNA MER2_type -505 726 1 2601 201 14 44 chr10 103447012 103447117 -36869648 + L1MD3 LINE L1 6660 6767 -1228 1391 208 16 31 chr10 103447117 103447434 -36869331 + AluJo SINE Alu 1 312 0 2601 201 14 44 chr10 103447434 103447965 -36868800 + L1MD3 LINE L1 6767 7277 -718 477 202 0 85 chr10 103447966 103448095 -36868670 + MLT1F1 LTR MaLR 1 118 -449 1033 228 0 0 chr10 103448100 103448324 -36868441 + L1MD3 LINE L1 7403 7626 -369 322 225 20 19 chr10 103448522 103448636 -36868129 - L1M3 LINE L1 -582 5586 5475 383 300 72 41 chr10 103448733 103449211 -36867554 - L1M3 LINE L1 -668 5498 5005 1971 138 23 3 chr10 103450684 103450988 -36865777 + AluSx SINE Alu 1 310 -2 304 53 0 0 chr10 103451004 103451066 -36865699 - AluSg SINE Alu 0 305 244 1274 109 0 17 chr10 103451066 103451241 -36865524 - AluSg SINE Alu -138 172 1 750 249 207 32 chr10 103452954 103453171 -36863594 - MIR SINE MIR 0 262 8 1218 222 86 38 chr10 103453428 103453843 -36862922 + MLT1C LTR MaLR 25 462 -5 1761 160 0 84 chr10 103454304 103454660 -36862105 - MER82 DNA MER2_type -127 526 201 226 275 23 46 chr10 103454671 103454802 -36861963 + Tigger7 DNA MER2_type 499 626 -1861 794 200 74 0 chr10 103454965 103455140 -36861625 - MER82 DNA MER2_type -449 204 17 220 317 106 19 chr10 103455509 103455613 -36861152 + MIR SINE MIR 38 150 -58 2440 161 11 16 chr10 103455745 103456181 -36860584 - MER57B LTR ERV1 0 434 1 246 277 190 29 chr10 103456778 103456915 -36859850 + MIR SINE MIR 49 207 -55 12343 123 17 8 chr10 103457280 103459440 -36857325 + Tigger2 DNA MER2_type 534 2718 0 291 157 0 0 chr10 103459573 103459624 -36857141 + (CA)n Simple_repeat Simple_repeat 2 52 0 516 276 57 66 chr10 103459692 103460058 -36856707 + MLT1K LTR MaLR 226 588 0 187 281 0 35 chr10 103460063 103460120 -36856645 - MIR SINE MIR -108 154 100 424 228 58 116 chr10 103460474 103460733 -36856032 - MLT1E LTR MaLR -349 244 1 213 162 0 0 chr10 103460801 103460838 -36855927 + L2 LINE L2 3235 3271 -1 590 330 54 21 chr10 103461718 103461957 -36854808 - MIR SINE MIR -2 260 14 613 293 49 10 chr10 103462080 103462285 -36854480 - MLT1L LTR MaLR -84 531 319 9484 196 24 14 chr10 103462285 103462376 -36854389 + L1M1 LINE L1 79 168 -7397 1406 30 0 0 chr10 103462376 103462543 -36854222 - L1PA5 LINE L1 0 6154 5988 9484 196 24 14 chr10 103462543 103464418 -36852347 + L1M1 LINE L1 168 2065 -5500 4727 222 25 22 chr10 103464762 103464945 -36851820 + L1PA12 LINE L1 2396 2577 -5007 2278 76 0 24 chr10 103464945 103465234 -36851531 + AluY SINE Alu 1 282 -29 207 0 0 0 chr10 103465237 103465260 -36851505 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4727 222 25 22 chr10 103465260 103467022 -36849743 + L1PA12 LINE L1 2578 4351 -3233 651 268 74 21 chr10 103468380 103468623 -36848142 - MIR SINE MIR 0 262 7 408 20 0 0 chr10 103468886 103468935 -36847830 + (TG)n Simple_repeat Simple_repeat 2 50 0 1626 190 39 36 chr10 103469170 103469554 -36847211 - MLT1B LTR MaLR 0 390 6 38066 33 4 2 chr10 103469661 103475312 -36841453 + L1PA2 LINE L1 490 6154 -1 361 180 36 0 chr10 103475418 103475526 -36841239 + L1ME1 LINE L1 2320 2434 -3948 658 244 67 35 chr10 103475534 103475849 -36840916 + L1ME1 LINE L1 3199 3523 -2859 500 221 9 43 chr10 103475921 103476108 -36840657 + L1MD2 LINE L1 6024 7827 -163 262 154 19 0 chr10 103476109 103476161 -36840604 + L1MC4a LINE L1 7752 7804 -4 2567 196 42 66 chr10 103476170 103476412 -36840353 + L1ME1 LINE L1 5186 5432 -970 1738 159 0 0 chr10 103476412 103476669 -36840096 + AluSx SINE Alu 1 257 -55 2567 196 42 66 chr10 103476669 103477171 -36839594 + L1ME1 LINE L1 5432 5945 -457 2796 7 0 0 chr10 103477171 103477474 -36839291 + AluYa5 SINE Alu 1 303 -8 2567 196 42 66 chr10 103477474 103477487 -36839278 + L1ME1 LINE L1 5945 5957 -445 1742 180 7 17 chr10 103477487 103477787 -36838978 + AluJo SINE Alu 1 297 -15 2567 196 42 66 chr10 103477787 103478124 -36838641 + L1ME1 LINE L1 5957 6243 -159 827 194 0 0 chr10 103478974 103479113 -36837652 + FLAM_C SINE Alu 1 139 -4 2513 55 0 7 chr10 103479115 103479423 -36837342 + AluY SINE Alu 1 306 -5 5397 86 3 10 chr10 103479936 103480472 -36836293 - L1PA10 LINE L1 -153 6015 5488 2277 101 0 22 chr10 103480472 103480788 -36835977 - AluSc SINE Alu 0 309 1 5397 86 3 10 chr10 103480788 103481229 -36835536 - L1PA10 LINE L1 -680 5488 5045 437 175 0 39 chr10 103481228 103481331 -36835434 + L1 LINE L1 4529 4627 -1519 * 2302 91 0 7 chr10 103481951 103482248 -36834517 + AluY SINE Alu 1 295 -16 5859 207 93 87 chr10 103482583 103483251 -36833514 - L1MC4 LINE L1 -235 7807 7145 495 0 0 0 chr10 103483251 103483306 -36833459 + (TA)n Simple_repeat Simple_repeat 1 55 0 5859 207 93 87 chr10 103483306 103483766 -36832999 - L1MC4 LINE L1 -897 7145 6689 491 113 0 0 chr10 103483766 103483837 -36832928 + AluS SINE Alu 1 71 -239 2352 78 3 0 chr10 103483837 103484132 -36832633 + AluSc SINE Alu 11 306 -3 5859 207 93 87 chr10 103484132 103484524 -36832241 - L1MC4 LINE L1 -1353 6689 6301 2247 95 10 7 chr10 103484524 103484865 -36831900 - AluSg SINE Alu 0 310 1 5859 207 93 87 chr10 103484865 103485815 -36830950 - L1MC4 LINE L1 -1741 6301 5359 517 81 0 14 chr10 103485815 103485889 -36830876 + AluSc SINE Alu 226 298 -11 5859 207 93 87 chr10 103485889 103485999 -36830766 - L1MC4 LINE L1 -2683 5359 5251 2170 134 7 0 chr10 103485999 103486332 -36830433 - AluSx SINE Alu 0 312 1 5859 207 93 87 chr10 103486332 103486905 -36829860 - L1MC4 LINE L1 -2791 5251 4487 180 0 0 0 chr10 103486905 103486925 -36829840 + (TC)n Simple_repeat Simple_repeat 1 20 0 5859 207 93 87 chr10 103486925 103486961 -36829804 - L1MC4 LINE L1 -3555 4487 4453 598 131 16 7 chr10 103486979 103487103 -36829662 - L1 LINE L1 -2129 4017 3893 360 0 0 0 chr10 103487111 103487151 -36829614 + (CA)n Simple_repeat Simple_repeat 2 41 0 475 280 111 14 chr10 103487158 103487583 -36829182 - L1M4 LINE L1 -1538 4608 4143 305 125 0 0 chr10 103487720 103487768 -36828997 + LTR40a LTR ERVL 472 519 0 265 276 194 0 chr10 103487768 103487866 -36828899 - L1M4 LINE L1 -1999 4147 4031 2385 67 10 7 chr10 103487936 103488236 -36828529 + AluY SINE Alu 1 301 -10 2441 87 0 0 chr10 103488247 103488558 -36828207 + AluY SINE Alu 1 311 0 930 115 15 0 chr10 103488563 103488693 -36828072 + AluSg/x SINE Alu 129 260 -52 218 0 94 0 chr10 103488700 103488732 -36828033 + A-rich Low_complexity Low_complexity 1 35 0 183 80 0 0 chr10 103488758 103488783 -36827982 + (CA)n Simple_repeat Simple_repeat 2 26 0 280 324 0 0 chr10 103488803 103488874 -36827891 - MER5B DNA MER1_type -69 109 39 364 147 59 0 chr10 103488974 103489042 -36827723 - MER34 LTR ERV1 0 542 471 523 269 45 29 chr10 103489653 103489890 -36826875 + Charlie7 DNA MER1_type 270 569 -2043 343 155 12 36 chr10 103489890 103489974 -36826791 + L1PB4 LINE L1 6074 6155 -1 523 269 45 29 chr10 103489974 103490073 -36826692 + Charlie7 DNA MER1_type 569 665 -1947 295 238 59 43 chr10 103490084 103490340 -36826425 + Charlie7 DNA MER1_type 2351 2610 -2 453 314 179 9 chr10 103490369 103490592 -36826173 + MIR SINE MIR 2 262 0 2295 73 25 0 chr10 103491146 103491273 -36825492 + AluY SINE Alu 1 123 -188 456 35 0 0 chr10 103491273 103491331 -36825434 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 2295 73 25 0 chr10 103491331 103491489 -36825276 + AluY SINE Alu 123 293 -18 204 263 284 11 chr10 103491565 103491660 -36825105 + MIR3 SINE MIR 37 157 -51 377 307 56 100 chr10 103491676 103491907 -36824858 - L2 LINE L2 -4 3268 3048 213 359 99 35 chr10 103492191 103492534 -36824231 + L2 LINE L2 2489 2853 -461 201 111 63 16 chr10 103493073 103493136 -36823629 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 475 160 20 140 chr10 103493450 103493525 -36823240 + MIR SINE MIR 77 127 -135 301 59 0 39 chr10 103493525 103493576 -36823189 + L1MA4 LINE L1 6246 6294 -6 475 160 20 140 chr10 103493576 103493650 -36823115 + MIR SINE MIR 127 208 -54 2350 213 42 54 chr10 103493663 103494348 -36822417 + L1M3e LINE L1 1 677 -6353 332 226 147 10 chr10 103495244 103495346 -36821419 + MIR3 SINE MIR 88 203 -5 234 0 0 0 chr10 103496568 103496594 -36820171 + (A)n Simple_repeat Simple_repeat 1 26 0 630 316 210 8 chr10 103497134 103497530 -36819235 - L3b LINE CR1 -6 1577 1102 376 339 9 0 chr10 103497836 103497945 -36818820 - L2 LINE L2 -20 3293 3184 264 210 0 25 chr10 103498652 103498677 -36818088 + L1M3e LINE L1 2066 2090 -4937 2361 156 36 14 chr10 103498677 103499094 -36817671 - MSTB LTR MaLR 0 426 1 264 210 0 25 chr10 103499094 103499149 -36817616 + L1M3e LINE L1 2090 2144 -4883 228 135 0 0 chr10 103499169 103499206 -36817559 + (CA)n Simple_repeat Simple_repeat 2 38 0 212 260 27 0 chr10 103499220 103499293 -36817472 + (TATATG)n Simple_repeat Simple_repeat 1 75 0 252 122 0 0 chr10 103499301 103499342 -36817423 + (CA)n Simple_repeat Simple_repeat 2 42 0 8318 244 72 17 chr10 103499347 103500219 -36816546 + L1M4c LINE L1 1043 1865 -4517 1758 199 0 0 chr10 103500219 103500520 -36816245 + AluSx SINE Alu 1 301 -11 8318 244 72 17 chr10 103500520 103503181 -36813584 + L1M4c LINE L1 1865 4785 -1597 1219 98 20 30 chr10 103503184 103503387 -36813378 - L1PA10 LINE L1 -1 6167 5967 916 28 0 0 chr10 103503492 103503599 -36813166 - AluYa5/8 SINE Alu -203 107 1 571 311 29 16 chr10 103504913 103505157 -36811608 + L2 LINE L2 2820 3066 -247 6055 141 25 4 chr10 103505157 103507163 -36809602 - L1PB1 LINE L1 0 6151 4106 344 267 261 11 chr10 103507172 103507348 -36809417 + L2 LINE L2 3093 3312 -1 227 230 40 30 chr10 103507443 103507543 -36809222 + (TAAA)n Simple_repeat Simple_repeat 2 102 0 259 208 0 56 chr10 103507781 103507853 -36808912 - MER5A DNA MER1_type -88 101 34 250 331 35 0 chr10 103508310 103508395 -36808370 - MIR SINE MIR -104 104 13 517 213 100 0 chr10 103509014 103509164 -36807601 - MER103 DNA DNA 0 166 2 339 155 35 0 chr10 103509895 103509953 -36806812 + AluS SINE Alu 1 60 -243 207 108 0 27 chr10 103510317 103510354 -36806411 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3315 132 10 0 chr10 103510359 103510880 -36805885 - L1PB3 LINE L1 -10 6144 5619 30005 107 11 58 chr10 103510909 103517342 -36799423 - L1PA7 LINE L1 -21 6133 12 2203 80 41 55 chr10 103517443 103517514 -36799251 - L1PB1 LINE L1 -3 6148 6078 1054 96 12 6 chr10 103517514 103517680 -36799085 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2071 131 0 0 chr10 103517681 103517963 -36798802 - AluSq SINE Alu -31 282 1 2203 80 41 55 chr10 103517963 103518252 -36798513 - L1PB1 LINE L1 -72 6079 5791 237 132 0 0 chr10 103518273 103518311 -36798454 + (TA)n Simple_repeat Simple_repeat 1 38 0 1520 100 4 0 chr10 103518312 103518541 -36798224 - L1PB1 LINE L1 -363 5788 5559 4446 229 23 18 chr10 103518542 103518753 -36798012 - L1PB1 LINE L1 -2097 4049 3841 4369 50 7 4 chr10 103518753 103519309 -36797456 + LTR6B LTR ERV1 1 558 0 4446 229 23 18 chr10 103519309 103520466 -36796299 - L1PB1 LINE L1 -2305 3841 2673 3848 245 31 35 chr10 103520577 103522266 -36794499 + L1 LINE L1 2008 3507 -4058 243 0 0 0 chr10 103522266 103522293 -36794472 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3848 245 31 35 chr10 103522293 103522561 -36794204 + L1 LINE L1 3507 3775 -3790 1009 197 130 0 chr10 103522555 103522824 -36793941 + L1 LINE L1 6328 6631 -934 * 440 219 57 0 chr10 103523114 103523219 -36793546 - MER69 DNA AcHobo 0 2526 2416 1353 193 2 113 chr10 103523219 103523688 -36793077 + L1M4 LINE L1 4655 5071 -1075 198 318 178 19 chr10 103525173 103525333 -36791432 - MIR3 SINE MIR -13 195 5 227 280 86 21 chr10 103525599 103525692 -36791073 - L2 LINE L2 -201 3071 2973 2125 143 0 0 chr10 103527360 103527661 -36789104 + AluSx SINE Alu 1 301 -11 495 285 119 5 chr10 103527686 103527879 -36788886 + MIR SINE MIR 36 250 -12 213 65 0 0 chr10 103527885 103527916 -36788849 + (TTA)n Simple_repeat Simple_repeat 1 31 0 845 184 78 60 chr10 103527916 103528199 -36788566 + L1M3 LINE L1 3724 4011 -2135 3328 203 29 38 chr10 103528203 103529258 -36787507 + L1M3 LINE L1 4423 5465 -715 7644 124 11 16 chr10 103529456 103533133 -36783632 - L1PA5 LINE L1 0 6469 2726 2430 87 0 3 chr10 103533133 103533442 -36783323 - AluY SINE Alu -2 309 2 7644 124 11 16 chr10 103533442 103536009 -36780756 - L1PA5 LINE L1 -3743 2726 149 372 238 0 12 chr10 103536009 103536093 -36780672 + MER58B DNA MER1_type 223 305 -36 2237 124 0 0 chr10 103536108 103536415 -36780350 + AluSg SINE Alu 1 307 -3 492 186 25 31 chr10 103536510 103536671 -36780094 + L1P LINE L1 7 166 -5980 13312 145 42 3 chr10 103536774 103539161 -36777604 - L1PBa LINE L1 -4385 2478 1 182 186 23 70 chr10 103539523 103539566 -36777199 - L2 LINE L2 -4 3268 3228 3857 185 118 36 chr10 103539644 103541088 -36775677 + MER52A LTR ERV1 1 1291 -165 280 258 60 18 chr10 103541249 103541416 -36775349 - L1M4 LINE L1 -752 5394 5221 412 294 72 56 chr10 103541445 103541717 -36775048 - L1M4 LINE L1 -1111 5035 4754 2021 139 7 0 chr10 103541860 103542155 -36774610 - AluSx SINE Alu -15 297 1 1933 152 10 16 chr10 103542204 103542514 -36774251 + AluJo SINE Alu 1 308 -4 2389 136 84 15 chr10 103542685 103543162 -36773603 - L1MB8 LINE L1 0 6178 5669 351 249 147 4 chr10 103543310 103543555 -36773210 - L1ME4a LINE L1 -65 6056 5777 541 259 116 0 chr10 103543638 103543785 -36772980 - MIR SINE MIR -13 249 86 23 33 0 0 chr10 103544684 103544714 -36772051 + AT_rich Low_complexity Low_complexity 1 30 0 419 342 27 11 chr10 103545004 103545191 -36771574 - MIR SINE MIR -41 221 32 929 230 99 28 chr10 103545406 103545728 -36771037 - MER2 DNA MER2_type 0 345 1 40426 52 3 0 chr10 103546315 103552440 -36764325 + L1PA4 LINE L1 11 6152 -3 446 216 37 8 chr10 103552461 103552595 -36764170 - L1P LINE L1 -796 5350 5213 21159 44 46 2 chr10 103552695 103555513 -36761252 - L1P LINE L1 -3206 2940 1 796 257 67 50 chr10 103555523 103555921 -36760844 - L1MEc LINE L1 -4314 2824 2414 2409 84 7 0 chr10 103555921 103556219 -36760546 - AluY SINE Alu -11 300 1 796 257 67 50 chr10 103556219 103556325 -36760440 - L1MEc LINE L1 -4724 2414 2311 1048 203 0 30 chr10 103556326 103556523 -36760242 - AluJo SINE Alu -21 291 101 1061 263 21 33 chr10 103556527 103557006 -36759759 - L1MEc LINE L1 -4789 2170 1698 282 222 91 0 chr10 103557000 103557099 -36759666 - L1MEc LINE L1 -5457 1402 1295 * 28 0 0 0 chr10 103557217 103557245 -36759520 + AT_rich Low_complexity Low_complexity 1 28 0 1708 173 25 7 chr10 103557630 103557913 -36758852 + AluJo SINE Alu 1 288 -24 351 364 116 9 chr10 103558638 103558863 -36757902 - MIR SINE MIR -12 250 2 566 306 55 20 chr10 103558945 103559144 -36757621 - L3 LINE CR1 -101 1476 1271 23 33 0 0 chr10 103559191 103559221 -36757544 + AT_rich Low_complexity Low_complexity 1 30 0 1149 116 11 21 chr10 103559221 103559411 -36757354 - L1PB1 LINE L1 -1 6150 5963 333 0 0 0 chr10 103559426 103559463 -36757302 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 2028 108 4 0 chr10 103559465 103559742 -36757023 - AluSp SINE Alu -35 278 1 193 257 135 54 chr10 103560006 103560080 -36756685 - MIR SINE MIR -180 82 3 969 321 26 31 chr10 103560097 103560515 -36756250 - L3 LINE CR1 -533 1044 629 330 258 26 71 chr10 103561024 103561179 -36755586 + MIR SINE MIR 28 175 -87 326 281 50 16 chr10 103561214 103561335 -36755430 - MLT1J LTR MaLR -52 459 335 2253 107 10 0 chr10 103561372 103561671 -36755094 - AluSx SINE Alu -10 302 1 242 289 0 36 chr10 103561844 103561927 -36754838 - MLT1J LTR MaLR -311 177 60 28 29 0 0 chr10 103562696 103562731 -36754034 + AT_rich Low_complexity Low_complexity 1 35 0 2278 110 3 7 chr10 103562768 103563076 -36753689 - AluSg SINE Alu -3 307 1 186 209 0 0 chr10 103565260 103565303 -36751462 + (TG)n Simple_repeat Simple_repeat 2 44 0 908 118 28 0 chr10 103567205 103567349 -36749416 - AluSg/x SINE Alu -21 291 144 3873 157 12 25 chr10 103567450 103567643 -36749122 + L1MB1 LINE L1 5419 5613 -555 2309 103 0 10 chr10 103567643 103567954 -36748811 + AluSq SINE Alu 1 308 -5 3873 157 12 25 chr10 103567954 103568520 -36748245 + L1MB1 LINE L1 5613 6168 0 1094 181 38 19 chr10 103568562 103568935 -36747830 - L1ME LINE L1 -690 5476 5098 24 53 0 0 chr10 103569462 103569500 -36747265 + AT_rich Low_complexity Low_complexity 1 38 0 1994 213 35 40 chr10 103569882 103570385 -36746380 - L1ME LINE L1 -2489 3657 3153 1943 141 87 0 chr10 103570385 103570719 -36746046 + THE1B LTR MaLR 2 364 0 10741 103 39 4 chr10 103570719 103572245 -36744520 + THE1B-int LTR MaLR 1 1579 -1 2027 140 83 0 chr10 103572252 103572588 -36744177 + THE1B LTR MaLR 1 364 0 1994 213 35 40 chr10 103572588 103572752 -36744013 - L1ME LINE L1 -2998 3148 2984 197 404 61 35 chr10 103573253 103573481 -36743284 + L2 LINE L2 2963 3196 -76 21 36 0 0 chr10 103573521 103573549 -36743216 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 103574389 103574409 -36742356 + (TA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 103574781 103574802 -36741963 + AT_rich Low_complexity Low_complexity 1 21 0 2314 107 3 0 chr10 103574895 103575203 -36741562 - AluSx SINE Alu -3 309 1 252 313 18 0 chr10 103575216 103575328 -36741437 + (TA)n Simple_repeat Simple_repeat 1 114 0 391 294 117 19 chr10 103575353 103575662 -36741103 - L1ME LINE L1 -467 5697 5359 240 324 41 17 chr10 103575929 103576094 -36740671 - MIR SINE MIR 0 262 2 31 0 0 0 chr10 103576533 103576564 -36740201 + AT_rich Low_complexity Low_complexity 1 31 0 1756 118 24 10 chr10 103576564 103576861 -36739904 - L1MA3 LINE L1 -270 6035 5735 658 163 39 0 chr10 103576854 103576865 -36739900 - L1M1 LINE L1 -7422 143 134 * 2370 104 3 0 chr10 103576865 103577173 -36739592 - AluSp SINE Alu -4 309 1 658 163 39 0 chr10 103577173 103577290 -36739475 - L1M1 LINE L1 -7431 134 10 21 82 0 0 chr10 103577566 103577615 -36739150 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr10 103577946 103577967 -36738798 + AT_rich Low_complexity Low_complexity 1 21 0 1815 152 40 0 chr10 103578352 103578649 -36738116 + MER58B DNA MER1_type 1 309 -32 268 346 46 50 chr10 103579671 103579799 -36736966 - L1MEc LINE L1 -6015 381 254 2140 117 9 29 chr10 103579799 103580115 -36736650 + AluSx SINE Alu 1 310 -2 268 346 46 50 chr10 103580115 103580289 -36736476 - L1MEc LINE L1 -6142 254 80 2093 272 53 37 chr10 103580330 103580693 -36736072 - L1ME LINE L1 -4174 2087 1731 368 111 37 0 chr10 103580693 103580774 -36735991 - L1MB2 LINE L1 -3 6168 6085 2093 272 53 37 chr10 103580774 103581915 -36734850 - L1ME LINE L1 -4530 1731 521 500 316 61 36 chr10 103582476 103582723 -36734042 - L1ME LINE L1 -514 5607 5355 4535 106 24 0 chr10 103582793 103583470 -36733295 - L1PA13 LINE L1 -3 6160 5468 2234 112 7 0 chr10 103583481 103583775 -36732990 + AluSq SINE Alu 1 296 -17 336 129 0 0 chr10 103583775 103583837 -36732928 + L1M1 LINE L1 5459 5520 -783 10575 155 16 62 chr10 103583857 103585214 -36731551 - L1P4 LINE L1 -716 5452 4034 1963 148 26 0 chr10 103585214 103585518 -36731247 - AluSx SINE Alu 0 312 1 10575 155 16 62 chr10 103585518 103585711 -36731054 - L1P4 LINE L1 -2134 4034 3834 2431 93 0 0 chr10 103585711 103586011 -36730754 - AluY SINE Alu -11 300 1 10575 155 16 62 chr10 103586011 103586989 -36729776 - L1P4 LINE L1 -2334 3834 3057 215 169 0 78 chr10 103586996 103587073 -36729692 + (TTTA)n Simple_repeat Simple_repeat 1 71 0 203 186 23 0 chr10 103587211 103587254 -36729511 + CT-rich Low_complexity Low_complexity 3 46 0 196 247 59 47 chr10 103587619 103587704 -36729061 - L2 LINE L2 -211 3102 3017 2534 201 50 50 chr10 103588370 103589112 -36727653 - L1ME2 LINE L1 0 6164 5423 730 208 82 55 chr10 103589107 103589362 -36727403 - L1MD3 LINE L1 -10 7985 7724 * 579 196 45 0 chr10 103589354 103589487 -36727278 - L1MD3 LINE L1 -129 7866 7728 * 505 210 30 89 chr10 103589484 103589777 -36726988 - L1ME2 LINE L1 -719 5443 5162 * 21 0 0 0 chr10 103589843 103589864 -36726901 + AT_rich Low_complexity Low_complexity 1 21 0 317 247 151 41 chr10 103589990 103590136 -36726629 - MIR SINE MIR 0 262 101 902 295 43 3 chr10 103590149 103590451 -36726314 + L1M2 LINE L1 12 325 -6524 228 385 34 0 chr10 103590840 103590957 -36725808 + L1M2 LINE L1 660 780 -6069 310 398 25 0 chr10 103591096 103591214 -36725551 + L1M2 LINE L1 665 785 -6064 263 387 21 0 chr10 103591265 103591358 -36725407 - MIR SINE MIR -166 96 2 201 326 197 23 chr10 103592112 103592244 -36724521 + L2 LINE L2 2936 3090 -182 408 40 0 0 chr10 103594333 103594383 -36722382 + (TG)n Simple_repeat Simple_repeat 2 51 0 358 254 138 38 chr10 103594502 103594725 -36722040 - MIR SINE MIR -6 256 4 231 405 82 13 chr10 103595308 103595688 -36721077 - L2 LINE L2 -784 2530 2125 200 326 106 21 chr10 103595751 103595892 -36720873 - L2 LINE L2 -1372 1942 1790 339 44 0 0 chr10 103596015 103596060 -36720705 + (A)n Simple_repeat Simple_repeat 1 45 0 240 244 143 0 chr10 103596174 103596263 -36720502 - MER20B DNA MER1_type -29 190 87 546 186 21 0 chr10 103596311 103596408 -36720357 - MER58A DNA MER1_type 0 224 126 279 139 0 0 chr10 103596408 103596451 -36720314 + MER72 LTR ERV1 652 694 -28 599 191 43 0 chr10 103596483 103596598 -36720167 - MER58A DNA MER1_type 0 120 1 447 282 38 8 chr10 103596625 103596756 -36720009 - MIR3 SINE MIR -64 144 10 1662 164 76 0 chr10 103597304 103597621 -36719144 - MER2 DNA MER2_type 0 344 4 213 306 42 0 chr10 103597791 103597863 -36718902 + L3 LINE CR1 1499 1573 -4 1269 117 20 10 chr10 103598547 103598743 -36718022 - L1PA16 LINE L1 -9 6157 5960 265 421 69 30 chr10 103598984 103599145 -36717620 - L2 LINE L2 -38 3234 3060 1913 132 7 0 chr10 103599145 103599418 -36717347 + AluSx SINE Alu 37 311 -1 265 421 69 30 chr10 103599418 103599489 -36717276 - L2 LINE L2 -212 3060 2993 191 333 87 29 chr10 103599894 103600032 -36716733 - L2 LINE L2 -817 2497 2352 2366 97 3 0 chr10 103600175 103600486 -36716279 + AluSq SINE Alu 1 312 -1 971 169 0 0 chr10 103601159 103601331 -36715434 + MLT1B LTR MaLR 1 172 -218 29292 117 12 62 chr10 103601336 103607116 -36709649 + L1P3 LINE L1 13 5490 -664 2024 138 3 16 chr10 103607117 103607428 -36709337 + AluSq SINE Alu 1 307 -6 234 0 0 0 chr10 103607537 103607563 -36709202 + (A)n Simple_repeat Simple_repeat 1 26 0 5114 46 12 18 chr10 103607563 103607766 -36708999 + L1PA7 LINE L1 5487 5690 -464 2814 7 0 0 chr10 103607766 103608071 -36708694 + AluYa5 SINE Alu 1 305 -6 5114 46 12 18 chr10 103608071 103608539 -36708226 + L1PA7 LINE L1 5690 6154 0 972 157 0 97 chr10 103608587 103608804 -36707961 + MLT1B LTR MaLR 192 387 -3 571 243 77 41 chr10 103608938 103609084 -36707681 - MIR3 SINE MIR -45 163 9 1070 263 25 71 chr10 103609275 103609365 -36707400 + L1MEc LINE L1 18 111 -6285 1911 89 4 0 chr10 103609365 103609612 -36707153 + AluY SINE Alu 1 248 -63 1070 263 25 71 chr10 103609612 103610001 -36706764 + L1MEc LINE L1 111 475 -5921 1609 171 60 6 chr10 103610007 103610410 -36706355 + LOR1b LTR ERV1 3 461 0 1613 253 30 92 chr10 103610410 103610892 -36705873 + L1MEc LINE L1 475 986 -5410 2331 113 7 0 chr10 103610892 103611202 -36705563 + AluSx SINE Alu 1 312 0 1613 253 30 92 chr10 103611202 103611436 -36705329 + L1MEc LINE L1 986 1233 -5163 306 0 0 0 chr10 103611436 103611470 -36705295 + (TA)n Simple_repeat Simple_repeat 1 34 0 1613 253 30 92 chr10 103611470 103611667 -36705098 + L1MEc LINE L1 1233 1319 -5077 2030 133 0 17 chr10 103611667 103611968 -36704797 + AluSx SINE Alu 1 296 -16 1613 253 30 92 chr10 103611968 103612092 -36704673 + L1MEc LINE L1 1319 1449 -4947 2502 87 0 0 chr10 103612143 103612453 -36704312 + AluY SINE Alu 2 311 0 1089 229 142 44 chr10 103612514 103612754 -36704011 + L1ME1 LINE L1 1137 1352 -5074 450 0 0 0 chr10 103612754 103612804 -36703961 + (CA)n Simple_repeat Simple_repeat 1 50 0 1089 229 142 44 chr10 103612804 103612914 -36703851 + L1ME1 LINE L1 1352 1450 -4976 2362 110 0 0 chr10 103612914 103613222 -36703543 + AluSg SINE Alu 3 310 0 1089 229 142 44 chr10 103613222 103613435 -36703330 + L1ME1 LINE L1 1450 1641 -4785 1793 168 0 24 chr10 103613435 103613733 -36703032 - AluJb SINE Alu -21 291 1 1089 229 142 44 chr10 103613733 103613881 -36702884 + L1ME1 LINE L1 1641 2013 -4413 268 222 62 0 chr10 103613935 103614016 -36702749 + L1ME1 LINE L1 2192 2277 -4330 2347 197 69 75 chr10 103614038 103614712 -36702053 + L1ME1 LINE L1 5409 6133 -313 430 178 55 0 chr10 103614712 103614785 -36701980 - MER2 DNA MER2_type -268 77 1 2347 197 69 75 chr10 103614785 103615068 -36701697 + L1ME1 LINE L1 6133 6416 -30 293 306 20 0 chr10 103616333 103616431 -36700334 - MIR SINE MIR -3 259 160 584 314 0 27 chr10 103616446 103616631 -36700134 + MIR SINE MIR 19 198 -64 623 92 0 135 chr10 103616848 103616989 -36699776 + L1M1 LINE L1 12 133 -7432 * 15459 149 31 10 chr10 103616986 103618663 -36698102 + L1MA1 LINE L1 1099 2738 -4983 1499 196 29 4 chr10 103618663 103618944 -36697821 - AluJb SINE Alu -22 290 3 15459 149 31 10 chr10 103618944 103623732 -36693033 + L1MA1 LINE L1 2738 7721 0 253 182 39 52 chr10 103623768 103623845 -36692920 + MIR SINE MIR 145 220 -42 285 102 0 20 chr10 103623956 103623995 -36692770 + L1MB2 LINE L1 6092 6131 -40 2142 96 10 33 chr10 103623995 103624298 -36692467 + AluSx SINE Alu 1 296 -16 449 335 39 0 chr10 103624383 103624576 -36692189 + MIR SINE MIR 58 256 -6 803 179 72 20 chr10 103624907 103625102 -36691663 - L1MB1 LINE L1 -3 6165 5961 8965 211 21 8 chr10 103625210 103627268 -36689497 + L1P LINE L1 3212 5283 -863 419 177 22 22 chr10 103628073 103628250 -36688515 + L1PA16 LINE L1 5953 6164 -2 881 274 33 18 chr10 103628359 103628749 -36688016 + L1M4c LINE L1 1286 1681 -4703 3107 175 93 30 chr10 103628772 103629047 -36687718 + L1MA7 LINE L1 5142 5398 -893 1708 185 10 20 chr10 103629047 103629344 -36687421 + AluJo SINE Alu 1 294 -18 3107 175 93 30 chr10 103629344 103629983 -36686782 + L1MA7 LINE L1 5398 6225 -66 186 43 0 0 chr10 103629983 103630006 -36686759 + (TG)n Simple_repeat Simple_repeat 1 23 0 3107 175 93 30 chr10 103630006 103630066 -36686699 + L1MA7 LINE L1 6225 6280 -11 1225 82 0 60 chr10 103630119 103630301 -36686464 + AluY SINE Alu 99 269 -42 380 197 0 0 chr10 103630301 103630362 -36686403 + Tigger1 DNA MER2_type 2358 2418 0 2301 107 7 3 chr10 103731052 103731360 -36585405 + AluSg SINE Alu 1 309 -1 193 388 35 0 chr10 103732017 103732133 -36584632 - MIR SINE MIR -14 248 129 1732 192 26 3 chr10 103732290 103732592 -36584173 - AluJb SINE Alu -3 309 1 1426 186 8 0 chr10 103732777 103733013 -36583752 - AluSx SINE Alu -18 294 57 234 91 0 0 chr10 103733824 103733857 -36582908 + (CCA)n Simple_repeat Simple_repeat 1 33 0 387 279 153 32 chr10 103736711 103736901 -36579864 - MIR SINE MIR -11 251 39 265 243 144 27 chr10 103736927 103737038 -36579727 - L2 LINE L2 -32 3240 3117 1545 162 9 0 chr10 103740110 103740339 -36576426 - AluSx SINE Alu -25 287 57 2006 150 0 3 chr10 103740358 103740652 -36576113 - AluJo SINE Alu -19 293 1 676 272 48 56 chr10 103740759 103740922 -36575843 - L1ME4a LINE L1 -202 5919 5756 2140 128 0 10 chr10 103740922 103741227 -36575538 - AluSx SINE Alu -6 306 5 676 272 48 56 chr10 103741227 103741438 -36575327 - L1ME4a LINE L1 -365 5756 5548 542 289 31 27 chr10 103741618 103741843 -36574922 + L2 LINE L2 2631 2856 -458 686 278 147 23 chr10 103742303 103742738 -36574027 - MLT1J LTR MaLR 0 511 23 189 0 0 0 chr10 103742962 103742983 -36573782 + (CA)n Simple_repeat Simple_repeat 2 22 0 1693 164 49 28 chr10 103743370 103743657 -36573108 + AluJo SINE Alu 1 293 -19 282 276 39 71 chr10 103744226 103744353 -36572412 + L2 LINE L2 3191 3313 0 372 269 134 8 chr10 103744652 103744786 -36571979 - MIR SINE MIR -9 253 103 1894 122 19 4 chr10 103744787 103744912 -36571853 + AluSx SINE Alu 1 123 -189 369 0 0 0 chr10 103744912 103744953 -36571812 + (CA)n Simple_repeat Simple_repeat 2 42 0 1894 122 19 4 chr10 103744953 103745097 -36571668 + AluSx SINE Alu 123 274 -38 410 105 0 0 chr10 103745097 103745154 -36571611 + AluSg/x SINE Alu 84 140 -169 291 308 39 0 chr10 103745171 103745275 -36571490 - MIR SINE MIR -147 115 8 505 184 0 10 chr10 103745359 103745462 -36571303 - L1MC4 LINE L1 -1 8041 7940 288 53 0 0 chr10 103746043 103746081 -36570684 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 299 223 148 14 chr10 103746534 103746629 -36570136 + MIR SINE MIR 29 134 -74 479 286 48 0 chr10 103746835 103746961 -36569804 + MIR SINE MIR 35 166 -96 491 278 52 23 chr10 103747088 103747261 -36569504 + MIR3 SINE MIR 17 194 -14 2422 68 7 0 chr10 103747999 103748292 -36568473 + AluSp SINE Alu 1 295 -18 330 115 0 0 chr10 103748299 103748351 -36568414 + (TC)n Simple_repeat Simple_repeat 1 52 0 1269 163 29 14 chr10 103748351 103748560 -36568205 - AluJo SINE Alu -18 294 83 360 167 14 0 chr10 103748560 103748632 -36568133 - MER53 DNA DNA -28 161 89 749 139 16 0 chr10 103748735 103748857 -36567908 + AluSq SINE Alu 133 256 -57 493 317 64 15 chr10 103749249 103749514 -36567251 + L3 LINE CR1 1218 1495 -82 1963 111 4 11 chr10 103749788 103750096 -36566669 - AluSc SINE Alu 0 306 1 894 213 0 0 chr10 103750098 103750253 -36566512 - AluJb SINE Alu -21 291 137 41 0 0 0 chr10 103751608 103751649 -36565116 + AT_rich Low_complexity Low_complexity 1 41 0 1591 189 0 3 chr10 103751774 103752075 -36564690 - AluSq SINE Alu -9 304 5 23 0 0 0 chr10 103752211 103752234 -36564531 + AT_rich Low_complexity Low_complexity 1 23 0 2585 56 0 3 chr10 103752359 103752664 -36564101 - AluSq SINE Alu -9 304 1 240 264 0 0 chr10 103752822 103752875 -36563890 + GA-rich Low_complexity Low_complexity 2 54 0 191 226 202 73 chr10 103752894 103753018 -36563747 + MIR3 SINE MIR 21 160 -48 305 284 55 31 chr10 103753023 103753150 -36563615 - MER5A DNA MER1_type -5 184 55 625 280 42 0 chr10 103753180 103753348 -36563417 - FAM SINE Alu 0 175 1 305 263 0 30 chr10 103753373 103753472 -36563293 - AluJ/FLAM SINE Alu -202 100 5 1496 269 55 43 chr10 103756340 103756700 -36560065 + REP3 LTR ERV 4 374 -188 2094 116 0 0 chr10 103756700 103756998 -36559767 - AluSx SINE Alu 0 311 14 1496 269 55 43 chr10 103756998 103757142 -36559623 + REP3 LTR ERV 374 515 -47 300 281 12 105 chr10 103757547 103757718 -36559047 - MIR SINE MIR -32 230 76 711 247 41 12 chr10 103758076 103758246 -36558519 - MIR3 SINE MIR -18 190 16 268 236 45 91 chr10 103759035 103759145 -36557620 - MIR SINE MIR -110 152 48 1386 214 154 96 chr10 103759291 103759553 -36557212 + L1MC5 LINE L1 6959 7204 -757 662 253 16 44 chr10 103759553 103759735 -36557030 - MER5B DNA MER1_type -1 177 1 1386 214 154 96 chr10 103759735 103759969 -36556796 + L1MC5 LINE L1 7204 7423 -538 318 26 0 0 chr10 103759969 103760008 -36556757 + (CA)n Simple_repeat Simple_repeat 2 40 0 1386 214 154 96 chr10 103760008 103760415 -36556350 + L1MC5 LINE L1 7423 7915 -46 883 269 81 59 chr10 103760834 103761240 -36555525 + L2 LINE L2 2838 3252 -61 377 317 39 100 chr10 103762178 103762538 -36554227 + L2 LINE L2 2868 3205 -67 305 205 0 12 chr10 103762568 103762651 -36554114 + GA-rich Low_complexity Low_complexity 3 84 0 2188 129 0 0 chr10 103762813 103763124 -36553641 + AluSx SINE Alu 1 311 -1 363 305 67 24 chr10 103763223 103763387 -36553378 + MER91A DNA MER1_type 24 194 -2 219 253 145 0 chr10 103763679 103763762 -36553003 + MIR SINE MIR 77 171 -91 2271 102 0 7 chr10 103764546 103764851 -36551914 + AluSc SINE Alu 1 303 -6 1728 183 13 3 chr10 103765862 103766162 -36550603 - AluJo SINE Alu -9 303 1 1865 203 107 19 chr10 103767241 103767670 -36549095 + MLT1C LTR MaLR 1 467 0 696 304 184 16 chr10 103767822 103768441 -36548324 + L2 LINE L2 2599 3313 0 189 97 32 0 chr10 103768790 103768821 -36547944 - MIR SINE MIR -208 54 23 1984 133 0 44 chr10 103769376 103769550 -36547215 - AluSx SINE Alu -9 303 148 2226 113 7 0 chr10 103769550 103769859 -36546906 - AluSq SINE Alu -2 311 1 1984 133 0 44 chr10 103769859 103770001 -36546764 - AluSx SINE Alu -164 148 1 821 231 18 12 chr10 103770076 103770245 -36546520 - AluJo SINE Alu -26 286 117 821 38 0 9 chr10 103770277 103770383 -36546382 + (TTTC)n Simple_repeat Simple_repeat 2 106 0 2177 110 0 0 chr10 103770384 103770665 -36546100 - AluSq SINE Alu -32 281 1 1503 163 7 18 chr10 103770690 103770967 -36545798 + Charlie4a DNA MER1_type 235 508 0 189 259 176 12 chr10 103771104 103771189 -36545576 + MIR3 SINE MIR 104 202 -6 2111 125 13 0 chr10 103771241 103771545 -36545220 + AluSq SINE Alu 1 308 -5 417 302 88 10 chr10 103773076 103773281 -36543484 - Charlie8 DNA MER1_type -2149 268 48 2787 209 14 16 chr10 103774062 103774612 -36542153 + MLT1F1 LTR MaLR 8 556 -11 2281 114 0 0 chr10 103774657 103774956 -36541809 - AluSx SINE Alu -13 299 1 603 291 170 36 chr10 103775648 103776147 -36540618 + L1MC4a LINE L1 5269 5834 -1974 2299 108 16 0 chr10 103776343 103776649 -36540116 - AluSx SINE Alu -1 311 1 1894 156 3 16 chr10 103777987 103778301 -36538464 - AluJb SINE Alu -2 310 1 351 249 196 19 chr10 103778370 103778579 -36538186 + L1P4 LINE L1 5306 5551 -615 239 65 22 65 chr10 103778584 103778630 -36538135 + Alu SINE Alu 252 295 -13 1369 160 103 26 chr10 103778659 103778912 -36537853 + L1MB8 LINE L1 5837 6120 -58 1997 117 41 21 chr10 103778912 103779063 -36537702 - AluSx SINE Alu -16 296 150 2475 71 3 0 chr10 103779063 103779359 -36537406 - AluSg SINE Alu -13 297 1 1997 117 41 21 chr10 103779359 103779497 -36537268 - AluSx SINE Alu -162 150 1 1369 160 103 26 chr10 103779497 103779555 -36537210 + L1MB8 LINE L1 6120 6172 -6 501 227 126 8 chr10 103779786 103779905 -36536860 - FLAM_A SINE Alu 0 133 1 202 253 95 84 chr10 103779956 103780051 -36536714 - L2 LINE L2 -7 3265 3170 2004 105 4 11 chr10 103780273 103780550 -36536215 + AluSx SINE Alu 11 285 -27 1794 161 13 19 chr10 103783997 103784307 -36532458 - AluJo SINE Alu 0 312 5 960 232 74 23 chr10 103784400 103784710 -36532055 + L1MC5 LINE L1 7266 7591 -370 * 1750 157 18 31 chr10 103784693 103785116 -36531649 + L1M2 LINE L1 5176 5592 -720 617 131 0 0 chr10 103785326 103785410 -36531355 - AluJ/FLAM SINE Alu -227 85 2 9886 136 69 110 chr10 103785521 103785698 -36531067 + L1MCa LINE L1 40 223 -6203 2342 51 54 3 chr10 103785698 103785994 -36530771 + AluY SINE Alu 1 311 0 9886 136 69 110 chr10 103785994 103787495 -36529270 + L1MCa LINE L1 223 1785 -4641 710 170 9 0 chr10 103787495 103787601 -36529164 + FLAM_A SINE Alu 1 107 -35 381 22 0 0 chr10 103787602 103787648 -36529117 + (TC)n Simple_repeat Simple_repeat 2 47 0 9886 136 69 110 chr10 103787648 103787767 -36528998 + L1MCa LINE L1 1785 1907 -4519 1815 116 179 0 chr10 103787767 103788052 -36528713 - MER1B DNA MER1_type -1 336 1 9886 136 69 110 chr10 103788052 103788410 -36528355 + L1MCa LINE L1 1907 2192 -4234 1809 116 30 0 chr10 103788410 103788678 -36528087 + AluSg SINE Alu 34 309 -1 9886 136 69 110 chr10 103788678 103788926 -36527839 + L1MCa LINE L1 2192 2449 -3977 3707 124 4 16 chr10 103788926 103789480 -36527285 + L1MC1 LINE L1 5787 6333 0 193 313 30 0 chr10 103789695 103789762 -36527003 + L3 LINE CR1 70 138 -1439 236 194 0 0 chr10 103789854 103789890 -36526875 + MIR SINE MIR 36 71 -137 2387 93 3 0 chr10 103790420 103790721 -36526044 + AluSp SINE Alu 1 302 -11 549 0 0 0 chr10 103790721 103790782 -36525983 + (TA)n Simple_repeat Simple_repeat 2 62 0 1960 125 4 4 chr10 103791183 103791463 -36525302 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr10 103791469 103791498 -36525267 + (GAAA)n Simple_repeat Simple_repeat 2 30 0 1424 161 56 67 chr10 103791917 103792202 -36524563 + AluJo SINE Alu 1 282 -30 264 30 0 0 chr10 103792396 103792429 -36524336 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 12312 15 0 0 chr10 103792458 103794622 -36522143 - L1HS LINE L1 -1 6154 3991 2069 149 0 0 chr10 103795715 103796023 -36520742 + AluSx SINE Alu 1 308 -4 495 268 162 58 chr10 103796031 103796515 -36520250 - MLT1L LTR MaLR -40 548 9 1266 285 71 30 chr10 103796820 103797227 -36519538 - MLT1K LTR MaLR 0 588 165 1749 139 7 58 chr10 103797488 103797797 -36518968 - AluJb SINE Alu -19 293 1 2390 77 0 32 chr10 103798113 103798284 -36518481 - AluSx SINE Alu -9 303 145 2367 66 0 7 chr10 103798284 103798573 -36518192 - AluSc SINE Alu -11 298 12 2390 77 0 32 chr10 103798573 103798714 -36518051 - AluSx SINE Alu -167 145 1 734 165 45 8 chr10 103798823 103798956 -36517809 - L1MB8 LINE L1 0 6178 6041 210 91 0 0 chr10 103798958 103798991 -36517774 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1519 129 13 0 chr10 103799021 103799245 -36517520 + AluSg/x SINE Alu 75 301 -9 735 200 0 0 chr10 103799326 103799451 -36517314 - FLAM_A SINE Alu -8 125 1 503 260 34 40 chr10 103799652 103799829 -36516936 + MIR SINE MIR 77 252 -10 413 216 11 34 chr10 103800439 103800527 -36516238 + MER81 DNA DNA 29 114 0 2464 78 0 0 chr10 103800591 103800886 -36515879 + AluSg SINE Alu 1 295 -15 388 285 59 4 chr10 103800943 103801133 -36515632 - L1MD3 LINE L1 -497 7498 7121 2018 159 1 11 chr10 103801141 103801504 -36515261 - L1P3 LINE L1 -425 5747 5398 760 56 0 0 chr10 103801507 103801597 -36515168 - AluY SINE Alu -16 295 206 4567 179 58 29 chr10 103801599 103801660 -36515105 - L1M4 LINE L1 -743 5403 5345 1897 54 0 0 chr10 103801660 103801883 -36514882 - AluY SINE Alu -6 305 83 4567 179 58 29 chr10 103801883 103802749 -36514016 - L1M4 LINE L1 -801 5345 4438 2135 134 0 0 chr10 103802749 103803048 -36513717 - AluSx SINE Alu -13 299 1 4567 179 58 29 chr10 103803048 103803189 -36513576 - L1M4 LINE L1 -1708 4438 4303 1841 143 40 93 chr10 103803207 103803605 -36513160 - MER21B LTR ERV1 -14 849 473 2065 128 6 32 chr10 103803606 103803918 -36512847 - AluSx SINE Alu -8 304 1 1849 127 32 3 chr10 103803930 103804213 -36512552 - L1PA16 LINE L1 0 6166 5876 1725 117 27 4 chr10 103804246 103804503 -36512262 + Tigger2 DNA MER2_type 1206 1468 -1250 615 123 85 0 chr10 103804512 103804618 -36512147 + MSTB1 LTR MaLR 315 429 -3 5712 198 97 19 chr10 103804624 103804861 -36511904 + MSTB1-int LTR MaLR 4 221 -1430 1699 149 27 27 chr10 103804861 103805156 -36511609 + AluJo SINE Alu 1 295 -17 5712 198 97 19 chr10 103805156 103806321 -36510444 + MSTB1-int LTR MaLR 221 1651 0 1544 197 38 29 chr10 103806321 103806658 -36510107 + MSTB1 LTR MaLR 1 340 -92 1472 225 103 20 chr10 103806658 103807067 -36509698 + LTR47B LTR ERVL 1 443 0 659 85 11 11 chr10 103807070 103807164 -36509601 + MSTB1 LTR MaLR 339 432 0 2630 133 25 2 chr10 103807164 103807563 -36509202 + Tigger2 DNA MER2_type 1459 1866 -852 415 269 0 11 chr10 103807565 103807658 -36509107 + Tigger2 DNA MER2_type 2617 2708 -10 27 0 0 0 chr10 103808514 103808541 -36508224 + AT_rich Low_complexity Low_complexity 1 27 0 604 192 110 14 chr10 103808782 103808928 -36507837 - MER106B DNA MER1_type 0 1059 900 658 103 0 0 chr10 103808928 103809015 -36507750 + Ricksha DNA DNA 3 89 -1957 2148 134 0 3 chr10 103809015 103809320 -36507445 + AluSg SINE Alu 1 304 -6 1224 114 0 12 chr10 103810710 103810876 -36505889 - AluSx SINE Alu -148 164 1 21 0 0 0 chr10 103812116 103812137 -36504628 + AT_rich Low_complexity Low_complexity 1 21 0 459 286 33 58 chr10 103812360 103812371 -36504394 + MIR SINE MIR 16 26 -222 2025 155 0 3 chr10 103812371 103812680 -36504085 + AluJb SINE Alu 1 308 -4 459 286 33 58 chr10 103812680 103812840 -36503925 + MIR SINE MIR 26 187 -61 1345 146 9 5 chr10 103813684 103813897 -36502868 - AluJo SINE Alu -12 300 87 805 258 122 58 chr10 103813959 103814210 -36502555 + L1MC5 LINE L1 7256 7489 -472 2265 105 0 0 chr10 103814210 103814506 -36502259 - AluSx SINE Alu -16 296 1 805 258 122 58 chr10 103814506 103814592 -36502173 + L1MC5 LINE L1 7489 7568 -393 845 182 0 0 chr10 103814592 103814724 -36502041 + FLAM_A SINE Alu 2 133 0 805 258 122 58 chr10 103814724 103815073 -36501692 + L1MC5 LINE L1 7568 7931 -30 29 47 0 0 chr10 103815801 103815844 -36500921 + AT_rich Low_complexity Low_complexity 1 43 0 380 206 88 74 chr10 103815916 103816167 -36500598 + MER34 LTR ERV1 449 542 0 287 273 31 31 chr10 103816176 103816304 -36500461 - L2 LINE L2 -86 3227 3100 671 279 17 11 chr10 103816711 103816890 -36499875 - MIR SINE MIR -80 182 3 387 333 46 21 chr10 103817760 103818000 -36498765 - MIR SINE MIR 0 262 17 856 149 0 15 chr10 103818261 103818395 -36498370 + FLAM_C SINE Alu 1 132 -1 389 277 0 12 chr10 103818900 103818983 -36497782 - MER63 DNA MER1_type 0 1061 980 1747 182 24 0 chr10 103819014 103819305 -36497460 + AluJb SINE Alu 1 298 -14 25 0 0 0 chr10 103819305 103819330 -36497435 + AT_rich Low_complexity Low_complexity 1 25 0 409 101 203 0 chr10 103819341 103819420 -36497345 - MER63 DNA MER1_type -339 723 3 407 217 83 19 chr10 103819506 103819555 -36497210 - MER113 DNA MER1_type? -350 171 127 2816 79 6 0 chr10 103819555 103819911 -36496854 - L1PA13 LINE L1 -3 6160 5803 407 217 83 19 chr10 103819911 103820018 -36496747 - MER113 DNA MER1_type? -394 127 5 2220 109 0 0 chr10 103820211 103820505 -36496260 - AluSg SINE Alu -16 294 1 2305 87 3 0 chr10 103821031 103821329 -36495436 + AluSg1 SINE Alu 1 299 -10 300 287 0 23 chr10 103823499 103823586 -36493179 + MLT1L LTR MaLR 1 85 -530 3499 238 83 82 chr10 103823793 103824210 -36492555 + L1MEc LINE L1 30 445 -5951 1524 183 57 4 chr10 103824210 103824329 -36492436 + AluJo SINE Alu 1 112 -200 180 0 0 0 chr10 103824329 103824349 -36492416 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1524 183 57 4 chr10 103824349 103824508 -36492257 + AluJo SINE Alu 112 294 -18 3499 238 83 82 chr10 103824508 103826015 -36490750 + L1MEc LINE L1 445 1956 -4440 274 250 78 62 chr10 103826018 103826146 -36490619 + MLT1L LTR MaLR 414 543 -72 1073 208 73 76 chr10 103826803 103827197 -36489568 + L1MC5 LINE L1 6812 7194 -767 1125 220 89 52 chr10 103827252 103827654 -36489111 + L1MC5 LINE L1 7260 7597 -364 342 0 0 0 chr10 103827654 103827692 -36489073 + (CA)n Simple_repeat Simple_repeat 2 39 0 1125 220 89 52 chr10 103827692 103827813 -36488952 + L1MC5 LINE L1 7597 7712 -249 2472 41 17 3 chr10 103827922 103828214 -36488551 - AluSp SINE Alu -16 297 2 536 182 45 9 chr10 103828214 103828324 -36488441 + L1MC5 LINE L1 7698 7811 -150 544 214 65 127 chr10 103828324 103828422 -36488343 + MER58C DNA MER1_type 1 103 -2317 1888 145 42 14 chr10 103828422 103828780 -36487985 - L1MB8 LINE L1 -6 6172 5805 1834 161 7 10 chr10 103828790 103829094 -36487671 - AluJb SINE Alu -9 303 1 544 214 65 127 chr10 103829094 103829213 -36487552 + MER58C DNA MER1_type 112 215 0 436 193 61 18 chr10 103829215 103829329 -36487436 + L1MC5 LINE L1 7806 7924 -37 294 292 183 0 chr10 103830208 103830345 -36486420 + MIR SINE MIR 53 214 -48 2245 102 0 0 chr10 103830374 103830657 -36486108 + AluSx SINE Alu 1 283 -29 2171 129 3 0 chr10 103830951 103831261 -36485504 - AluSx SINE Alu -1 311 1 291 246 15 39 chr10 103831492 103831622 -36485143 + HAL1b LINE L1 1221 1347 -1 2425 71 10 0 chr10 103831720 103832017 -36484748 + AluSq SINE Alu 6 305 -8 625 221 22 22 chr10 103832294 103832430 -36484335 + Charlie1b DNA MER1_type 1 136 -387 616 113 0 0 chr10 103832437 103832517 -36484248 - AluSg/x SINE Alu -19 291 212 1114 157 132 53 chr10 103832520 103832744 -36484021 + Charlie1b DNA MER1_type 140 398 -2363 2183 66 0 7 chr10 103832744 103833018 -36483747 - AluSx SINE Alu -3 309 38 1114 157 132 53 chr10 103833018 103833111 -36483654 + Charlie1b DNA MER1_type 398 482 -41 207 270 135 11 chr10 103833383 103833472 -36483293 - MIR SINE MIR -132 130 31 694 244 114 0 chr10 103834240 103834441 -36482324 + MIR SINE MIR 24 247 -15 221 284 162 28 chr10 103834489 103834605 -36482160 - MIR SINE MIR -65 143 33 228 271 17 0 chr10 103834804 103834863 -36481902 - L2 LINE L2 -77 3195 3136 507 207 0 8 chr10 103834881 103834984 -36481781 + Tigger3(Golem) DNA MER2_type 2 2790 -239 1462 177 37 41 chr10 103835009 103835303 -36481462 - AluJo SINE Alu -19 293 1 1388 132 87 80 chr10 103835303 103835486 -36481279 + Tigger3(Golem) DNA MER2_type 2738 2925 -103 1970 160 3 0 chr10 103835486 103835779 -36480986 - AluSx SINE Alu -18 294 1 1388 132 87 80 chr10 103835779 103835884 -36480881 + Tigger3(Golem) DNA MER2_type 2925 3028 0 293 313 113 13 chr10 103835922 103836072 -36480693 - L2 LINE L2 -192 3080 2916 316 274 51 43 chr10 103836137 103836254 -36480511 - L2 LINE L2 -636 2678 2561 2280 97 10 3 chr10 103836602 103836902 -36479863 - AluSx SINE Alu -10 302 1 370 211 35 88 chr10 103836905 103837019 -36479746 - MIR3 SINE MIR -29 179 72 2378 201 93 87 chr10 103837132 103837992 -36478773 - L1MC5 LINE L1 -379 7582 6718 2493 57 3 7 chr10 103839175 103839476 -36477289 - AluY SINE Alu -11 300 1 687 275 95 14 chr10 103839519 103839741 -36477024 + MIR SINE MIR 7 246 -16 1904 132 30 7 chr10 103840233 103840529 -36476236 + AluSg SINE Alu 1 303 -7 815 134 45 15 chr10 103841311 103841445 -36475320 - MER30 DNA MER1_type -92 138 1 2347 93 3 0 chr10 103841602 103841903 -36474862 + AluSc SINE Alu 1 302 -7 536 137 0 42 chr10 103842135 103842230 -36474535 - L1M3 LINE L1 -479 5692 5602 2318 95 3 0 chr10 103842640 103842936 -36473829 + AluSp SINE Alu 1 297 -16 2228 86 0 4 chr10 103843213 103843527 -36473238 - AluSx SINE Alu 0 317 5 216 240 0 0 chr10 103843682 103843732 -36473033 + (CA)n Simple_repeat Simple_repeat 2 51 0 419 153 66 203 chr10 103843855 103843916 -36472849 - MER3 DNA MER1_type 0 209 141 2111 98 0 7 chr10 103843916 103844191 -36472574 + AluSx SINE Alu 1 273 -39 419 153 66 203 chr10 103844191 103844371 -36472394 - MER3 DNA MER1_type -68 141 1 340 351 109 28 chr10 103844700 103844911 -36471854 - L2 LINE L2 0 3272 3045 527 306 148 17 chr10 103845281 103845505 -36471260 + MIR SINE MIR 14 262 0 2279 113 0 3 chr10 103845617 103845919 -36470846 - AluSx SINE Alu -11 301 1 1201 197 5 0 chr10 103845969 103846177 -36470588 - MER3 DNA MER1_type 0 209 1 2120 135 0 0 chr10 103846291 103846588 -36470177 + AluJb SINE Alu 1 297 -15 1959 101 93 0 chr10 103846588 103846866 -36469899 + AluSx SINE Alu 1 304 -8 471 285 145 2 chr10 103847002 103847228 -36469537 - L2 LINE L2 -4 3268 2961 192 266 112 65 chr10 103848229 103848394 -36468371 - L2 LINE L2 -632 2682 2526 1070 157 103 157 chr10 103848394 103848713 -36468052 + AluJo SINE Alu 1 302 0 192 266 112 65 chr10 103848713 103848886 -36467879 - L2 LINE L2 -788 2526 2328 207 344 46 8 chr10 103849348 103849479 -36467286 - L2 LINE L2 -1120 2194 2059 2001 142 3 16 chr10 103849789 103850100 -36466665 + AluJb SINE Alu 1 307 -5 667 250 123 115 chr10 103850139 103850424 -36466341 + L1ME4a LINE L1 5291 5572 -549 356 98 0 0 chr10 103850424 103850475 -36466290 - Alu SINE Alu -1 300 250 667 250 123 115 chr10 103850475 103850643 -36466122 + L1ME4a LINE L1 5572 5737 -384 2216 96 0 3 chr10 103850643 103850950 -36465815 + AluSx SINE Alu 1 306 0 667 250 123 115 chr10 103850950 103851053 -36465712 + L1ME4a LINE L1 5737 5905 -216 1544 287 164 40 chr10 103852065 103852093 -36464672 + L3 LINE CR1 342 365 -1212 2279 103 3 7 chr10 103852093 103852394 -36464371 - AluSq SINE Alu -13 300 1 1544 287 164 40 chr10 103852394 103853287 -36463478 + L3 LINE CR1 365 1377 -200 505 203 23 47 chr10 103853614 103853742 -36463023 - Charlie8 DNA MER1_type -2238 179 55 204 254 36 36 chr10 103853785 103853840 -36462925 + MIR3 SINE MIR 151 205 -3 2565 126 48 19 chr10 103853865 103854279 -36462486 + MSTB LTR MaLR 1 426 0 612 212 45 0 chr10 103854380 103854512 -36462253 + MER5B DNA MER1_type 41 178 0 282 223 107 45 chr10 103857265 103857386 -36459379 + MIR3 SINE MIR 69 203 -5 470 244 43 9 chr10 103857536 103857651 -36459114 - MIR3 SINE MIR -48 160 42 1202 102 24 0 chr10 103857994 103858161 -36458604 + L1PA16 LINE L1 5971 6141 -25 1838 144 17 20 chr10 103859447 103859745 -36457020 + AluJo SINE Alu 1 297 -15 1846 144 3 32 chr10 103862056 103862368 -36454397 + AluJo SINE Alu 1 303 -9 480 266 186 15 chr10 103862507 103862770 -36453995 + MER102b DNA MER1_type 24 331 -10 24 0 0 0 chr10 103863579 103863603 -36453162 + AT_rich Low_complexity Low_complexity 1 24 0 477 227 13 65 chr10 103863794 103863948 -36452817 + L1MC5 LINE L1 7698 7843 -118 2265 104 0 3 chr10 103864018 103864315 -36452450 - AluSx SINE Alu -15 297 2 338 209 31 62 chr10 103864364 103864493 -36452272 + L1MC5 LINE L1 7814 7938 -23 2175 108 3 3 chr10 103864494 103864791 -36451974 + AluSx SINE Alu 1 297 -15 835 252 104 15 chr10 103865515 103865636 -36451129 - L2 LINE L2 -24 3289 3180 447 19 0 0 chr10 103865636 103865688 -36451077 + (CA)n Simple_repeat Simple_repeat 2 53 0 835 252 104 15 chr10 103865688 103865836 -36450929 - L2 LINE L2 -133 3180 2996 201 196 0 0 chr10 103866158 103866204 -36450561 + GA-rich Low_complexity Low_complexity 3 48 0 2207 114 0 3 chr10 103866216 103866513 -36450252 + AluSx SINE Alu 1 296 -16 405 248 146 7 chr10 103867045 103867182 -36449583 + MIR SINE MIR 95 250 -12 189 0 0 0 chr10 103867563 103867584 -36449181 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2349 92 3 0 chr10 103870534 103870837 -36445928 - AluSc SINE Alu -3 306 3 2510 152 26 66 chr10 103871189 103871249 -36445516 + L1MB7 LINE L1 5612 5673 -511 2436 89 0 0 chr10 103871249 103871551 -36445214 + AluSq SINE Alu 5 306 -7 2510 152 26 66 chr10 103871551 103872022 -36444743 + L1MB7 LINE L1 5673 6122 -62 2259 95 3 3 chr10 103872150 103872446 -36444319 - AluSx SINE Alu -16 296 1 331 369 0 0 chr10 103872676 103872806 -36443959 + L2 LINE L2 2231 2360 -954 257 188 259 0 chr10 103873207 103873292 -36443473 - MIR3 SINE MIR -10 198 92 * 282 353 51 66 chr10 103873272 103873641 -36443124 + L2 LINE L2 2718 3076 -196 952 172 94 39 chr10 103873679 103873882 -36442883 + MER20 DNA MER1_type 6 219 0 185 308 48 19 chr10 103874172 103874276 -36442489 - MIR SINE MIR -10 252 146 * 767 278 54 27 chr10 103874274 103874523 -36442242 - MIR SINE MIR -1 261 8 1659 158 24 27 chr10 103874793 103875090 -36441675 + AluJo SINE Alu 4 299 -13 2153 251 50 33 chr10 103875163 103875282 -36441483 + L1MC5 LINE L1 6313 6428 -1552 1953 91 12 0 chr10 103875282 103875535 -36441230 + AluSg SINE Alu 41 296 -14 2153 251 50 33 chr10 103875535 103876358 -36440407 + L1MC5 LINE L1 6428 7255 -725 1182 235 53 97 chr10 103876473 103877176 -36439589 + L1MC5 LINE L1 7260 7931 -30 252 294 0 0 chr10 103877712 103877780 -36438985 + L1MDb LINE L1 54 121 -6288 2371 97 3 0 chr10 103878517 103878826 -36437939 + AluY SINE Alu 1 310 -1 2134 117 13 0 chr10 103878867 103879165 -36437600 + AluSq SINE Alu 1 302 -11 1180 184 83 21 chr10 103879169 103879562 -36437203 + L1MDb LINE L1 826 1219 -5190 2328 90 3 0 chr10 103880816 103881106 -36435659 - AluSq SINE Alu -22 291 1 688 266 68 74 chr10 103881661 103881730 -36435035 + L1ME4a LINE L1 5493 5561 -560 2151 118 14 0 chr10 103881730 103882027 -36434738 + AluSx SINE Alu 1 301 -11 688 266 68 74 chr10 103882027 103882401 -36434364 + L1ME4a LINE L1 5561 5933 -188 381 264 41 16 chr10 103882510 103882631 -36434134 + L1MC5 LINE L1 7832 7955 -6 235 174 43 0 chr10 103883380 103883426 -36433339 + L1ME4a LINE L1 5896 5943 -178 1430 164 16 21 chr10 103883979 103884500 -36432265 + L1MB1 LINE L1 5078 5600 -568 1802 150 3 14 chr10 103884500 103884814 -36431951 + AluJb SINE Alu 1 311 0 1430 164 16 21 chr10 103884814 103885205 -36431560 + L1MB1 LINE L1 5600 6122 -46 1780 152 38 0 chr10 103885205 103885494 -36431271 + AluJb SINE Alu 1 300 -12 1430 164 16 21 chr10 103885494 103885540 -36431225 + L1MB1 LINE L1 6122 6167 -1 217 213 43 0 chr10 103886886 103886933 -36429832 - L2 LINE L2 -1 3312 3264 357 145 13 40 chr10 103887125 103887201 -36429564 + MLT1G1 LTR MaLR 522 595 0 1078 153 0 0 chr10 103887290 103887447 -36429318 - AluSg/x SINE Alu -15 297 141 24 92 0 18 chr10 103887522 103887590 -36429175 + AT_rich Low_complexity Low_complexity 1 68 -39 2572 66 0 0 chr10 103887590 103887895 -36428870 - AluY SINE Alu -6 305 1 24 92 0 18 chr10 103887895 103887935 -36428830 + AT_rich Low_complexity Low_complexity 68 107 0 43 0 0 0 chr10 103887989 103888032 -36428733 + AT_rich Low_complexity Low_complexity 1 43 0 555 205 16 25 chr10 103888152 103888274 -36428491 + MIR SINE MIR 51 171 -91 2494 82 0 0 chr10 103888417 103888722 -36428043 + AluSx SINE Alu 1 305 -7 521 262 134 0 chr10 103888797 103888946 -36427819 - MER69A DNA AcHobo -6 171 3 5286 160 85 82 chr10 103889676 103890190 -36426575 - Charlie1 DNA MER1_type -4 2757 2246 2381 78 0 0 chr10 103890190 103890484 -36426281 + AluY SINE Alu 5 298 -13 5286 160 85 82 chr10 103890484 103890505 -36426260 - Charlie1 DNA MER1_type -515 2246 2227 180 0 0 0 chr10 103890505 103890525 -36426240 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 5286 160 85 82 chr10 103890525 103891314 -36425451 - Charlie1 DNA MER1_type -534 2227 1428 2246 145 64 10 chr10 103891343 103891750 -36425015 + L1MB2 LINE L1 5716 6144 -27 464 177 35 35 chr10 103891764 103891877 -36424888 - Charlie1 DNA MER1_type -2648 113 1 1938 168 3 0 chr10 103893477 103893774 -36422991 + AluJb SINE Alu 1 298 -14 1222 158 14 29 chr10 103893797 103894006 -36422759 + AluJo SINE Alu 1 206 -106 707 174 0 9 chr10 103894475 103894584 -36422181 + Tigger3(Golem) DNA MER2_type 1 108 -2921 4161 127 44 26 chr10 103894584 103895033 -36421732 + Tigger3(Golem) DNA MER2_type 2284 2753 -275 1783 167 0 10 chr10 103895033 103895349 -36421416 - AluJb SINE Alu 0 313 1 4161 127 44 26 chr10 103895349 103895630 -36421135 + Tigger3(Golem) DNA MER2_type 2753 3028 0 1106 159 67 0 chr10 103895697 103895892 -36420873 + MER3 DNA MER1_type 2 209 0 2735 42 0 0 chr10 103896033 103896341 -36420424 + AluY SINE Alu 1 308 -3 588 157 29 0 chr10 103896381 103896483 -36420282 + L1MC1 LINE L1 6229 6333 0 848 173 0 0 chr10 103896904 103897037 -36419728 + FLAM_C SINE Alu 1 133 0 328 335 97 11 chr10 103897456 103897641 -36419124 - MIR SINE MIR 0 262 62 285 302 47 19 chr10 103897722 103897828 -36418937 + MER5B DNA MER1_type 70 178 0 2482 88 0 0 chr10 103897847 103898152 -36418613 + AluSx SINE Alu 1 305 -7 397 291 66 33 chr10 103898652 103898803 -36417962 + L2 LINE L2 3111 3266 -6 216 356 95 30 chr10 103899098 103899136 -36417629 + L2 LINE L2 2575 2609 -705 2323 128 55 0 chr10 103899136 103899479 -36417286 + MER47A DNA MER2_type 4 365 -1 216 356 95 30 chr10 103899479 103899573 -36417192 + L2 LINE L2 2609 2696 -618 2291 102 0 10 chr10 103899573 103899877 -36416888 + AluSx SINE Alu 1 301 -11 216 356 95 30 chr10 103899877 103900038 -36416727 + L2 LINE L2 2696 2888 -426 801 107 7 87 chr10 103900247 103900397 -36416368 + FLAM_C SINE Alu 6 143 0 302 0 26 0 chr10 103900541 103900579 -36416186 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1969 154 0 6 chr10 103900801 103901112 -36415653 - AluJb SINE Alu -2 310 2 349 178 200 0 chr10 103901214 103901304 -36415461 + MLT1L LTR MaLR 508 615 0 2262 112 0 0 chr10 103901333 103901636 -36415129 + AluY SINE Alu 1 303 -8 955 198 0 6 chr10 103901648 103901815 -36414950 + FRAM SINE Alu 1 158 -18 1808 256 37 30 chr10 103902018 103902321 -36414444 + L1MEc LINE L1 1069 1368 -5028 1839 158 10 3 chr10 103902321 103902625 -36414140 + AluJo SINE Alu 1 306 -6 1808 256 37 30 chr10 103902625 103903050 -36413715 + L1MEc LINE L1 1368 1802 -4594 1473 220 76 38 chr10 103903050 103903472 -36413293 + LTR47B LTR ERVL 6 443 0 2753 208 46 10 chr10 103903472 103904220 -36412545 + L1MEc LINE L1 1801 2534 -3681 2220 96 14 3 chr10 103905146 103905439 -36411326 - AluSx SINE Alu -16 296 1 330 26 0 0 chr10 103905519 103905558 -36411207 + (TG)n Simple_repeat Simple_repeat 2 40 0 239 295 115 6 chr10 103905563 103905719 -36411046 - L1MC4a LINE L1 -1870 5938 5766 22 0 0 0 chr10 103906578 103906600 -36410165 + GC_rich Low_complexity Low_complexity 1 22 0 468 371 79 16 chr10 103907429 103907747 -36409018 + L2 LINE L2 2935 3272 0 1351 177 46 107 chr10 103907767 103907895 -36408870 - MER89 LTR ERV1 -13 546 412 1792 141 7 21 chr10 103907895 103908178 -36408587 - AluJo SINE Alu -33 279 1 1351 177 46 107 chr10 103908178 103908422 -36408343 - MER89 LTR ERV1 -147 412 197 528 104 10 31 chr10 103908389 103908485 -36408280 - MER89 LTR ERV1 -465 94 1 * 668 237 78 61 chr10 103910136 103910381 -36406384 + MLT1L LTR MaLR 2 250 -365 546 181 0 0 chr10 103910520 103910603 -36406162 + FAM SINE Alu 1 83 -93 1074 146 0 0 chr10 103910757 103910915 -36405850 - AluSg/x SINE Alu -21 289 132 453 167 0 51 chr10 103911264 103911342 -36405423 + FAM SINE Alu 93 166 -19 222 37 0 0 chr10 103911401 103911428 -36405337 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1233 134 32 5 chr10 103911432 103911618 -36405147 - AluJb SINE Alu -36 276 86 697 255 158 0 chr10 103911632 103911816 -36404949 + MLT1L LTR MaLR 344 556 -59 343 264 40 16 chr10 103911983 103912108 -36404657 + L2 LINE L2 2918 3045 -227 2521 208 71 17 chr10 103912490 103913028 -36403737 - MLT1F1 LTR MaLR 0 567 1 426 287 40 34 chr10 103913418 103913626 -36403139 + MLT1K LTR MaLR 40 235 -357 1549 181 30 69 chr10 103913996 103914199 -36402566 + L1M4 LINE L1 4964 5173 -1012 1582 174 53 27 chr10 103914199 103914498 -36402267 + AluJo SINE Alu 1 307 -5 1549 181 30 69 chr10 103914498 103914804 -36401961 + L1M4 LINE L1 5173 5442 -743 1197 323 60 5 chr10 103914803 103915218 -36401547 + L1M2 LINE L1 13 450 -6399 * 1382 181 0 9 chr10 103915676 103915903 -36400862 + AluJo SINE Alu 75 299 -13 12015 169 21 11 chr10 103915903 103917784 -36398981 + L1PB4 LINE L1 2906 4836 -1320 1714 170 21 3 chr10 103917784 103918073 -36398692 + AluSx SINE Alu 1 294 -18 12015 169 21 11 chr10 103918073 103919387 -36397378 + L1PB4 LINE L1 4836 6135 -21 42138 63 6 2 chr10 103919387 103925515 -36391250 + L1PA5 LINE L1 2 6154 0 292 185 123 0 chr10 103925572 103925653 -36391112 + L1M4 LINE L1 5423 5513 -671 990 198 15 2 chr10 103925661 103925935 -36390830 + MLT1F LTR MaLR 212 542 0 198 156 22 22 chr10 103925967 103926012 -36390753 + MIR SINE MIR 216 260 -2 333 0 0 0 chr10 103926321 103926358 -36390407 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 0 0 0 chr10 103926575 103926601 -36390164 + AT_rich Low_complexity Low_complexity 1 26 0 11871 198 53 22 chr10 103926613 103930393 -36386372 - L1PA16 LINE L1 -33 6849 2807 2182 111 7 3 chr10 103930393 103930681 -36386084 - AluSc SINE Alu -19 290 2 11871 198 53 22 chr10 103930681 103932242 -36384523 - L1PA16 LINE L1 -4075 2807 1297 518 161 322 0 chr10 103932243 103932386 -36384379 - L1PA16 LINE L1 -5712 1151 963 1858 103 110 11 chr10 103932396 103932668 -36384097 - AluSx SINE Alu -13 299 1 1678 155 50 58 chr10 103933644 103933886 -36382879 + MER2 DNA MER2_type 1 241 -104 2925 16 0 0 chr10 103933886 103934203 -36382562 + AluYb8 SINE Alu 1 317 -1 1678 155 50 58 chr10 103934203 103934302 -36382463 + MER2 DNA MER2_type 241 339 -6 191 208 83 0 chr10 103934323 103934371 -36382394 - MIR SINE MIR -111 151 100 25 0 0 0 chr10 103934608 103934633 -36382132 + AT_rich Low_complexity Low_complexity 1 25 0 372 300 88 6 chr10 103934635 103934795 -36381970 + MIR SINE MIR 5 177 -85 275 343 45 35 chr10 103934775 103934976 -36381789 + L2 LINE L2 2639 2841 -473 * 184 389 67 0 chr10 103935124 103935214 -36381551 + L2 LINE L2 2983 3078 -194 295 330 10 10 chr10 103935298 103935401 -36381364 + L2 LINE L2 3134 3236 -36 316 235 74 0 chr10 103935522 103935603 -36381162 + MER5A DNA MER1_type 1 87 -102 191 337 120 0 chr10 103935555 103935647 -36381118 - MER5A DNA MER1_type -22 167 65 * 1910 139 3 20 chr10 103935648 103935951 -36380814 + AluSx SINE Alu 1 298 -14 823 124 0 29 chr10 103936053 103936190 -36380575 - FLAM_C SINE Alu 0 133 1 3539 142 51 60 chr10 103936190 103936651 -36380114 - L1MB5 LINE L1 -33 6141 5678 2361 123 103 15 chr10 103936651 103937048 -36379717 - MSTB1 LTR MaLR 0 432 1 3539 142 51 60 chr10 103937048 103937242 -36379523 - L1MB5 LINE L1 -496 5678 5490 2177 121 14 0 chr10 103937242 103937539 -36379226 - AluSp SINE Alu -12 301 1 3539 142 51 60 chr10 103937539 103937587 -36379178 - L1MB5 LINE L1 -684 5490 5443 1370 275 48 39 chr10 103937587 103938071 -36378694 - Charlie2b DNA MER1_type -1760 1022 535 2690 74 10 33 chr10 103938103 103938341 -36378424 + L1MA1 LINE L1 5912 6154 -148 1840 176 3 3 chr10 103938341 103938637 -36378128 + AluJb SINE Alu 1 296 -16 186 103 0 0 chr10 103938641 103938670 -36378095 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 2690 74 10 33 chr10 103938670 103938820 -36377945 + L1MA1 LINE L1 6157 6296 -6 2027 129 24 0 chr10 103938823 103939118 -36377647 - AluSx SINE Alu -10 302 1 29 0 0 0 chr10 103939118 103939147 -36377618 + AT_rich Low_complexity Low_complexity 1 29 0 1142 260 137 5 chr10 103939299 103939737 -36377028 - Charlie2b DNA MER1_type -2286 496 1 862 301 103 33 chr10 103940066 103940495 -36376270 - MLT1J LTR MaLR -9 502 44 2194 75 215 185 chr10 103940572 103941135 -36375630 + LTR12 LTR ERV1 1 580 -134 2337 109 0 0 chr10 103941235 103941529 -36375236 - AluSx SINE Alu -18 294 1 399 159 0 0 chr10 103941620 103941689 -36375076 + MER5A DNA MER1_type 10 78 -111 835 143 0 8 chr10 103941691 103941810 -36374955 + FLAM_C SINE Alu 6 123 -20 778 141 29 8 chr10 103941810 103942057 -36374708 + GA-rich Low_complexity Low_complexity 1 252 0 670 240 27 46 chr10 103942144 103942481 -36374284 - MLT1I LTR MaLR -14 395 21 800 282 110 36 chr10 103942784 103943231 -36373534 + L2 LINE L2 2818 3297 -16 1672 124 43 77 chr10 103943745 103944044 -36372721 - AluJb SINE Alu -23 289 1 204 125 0 0 chr10 103945685 103945717 -36371048 + (CGG)n Simple_repeat Simple_repeat 2 33 0 190 333 10 29 chr10 103947244 103947346 -36369419 + L3 LINE CR1 623 722 -855 1180 279 40 47 chr10 103947813 103948257 -36368508 - MARNA DNA Mariner -109 477 37 498 245 37 61 chr10 103948116 103948279 -36368486 + MARNA DNA Mariner 414 572 -14 * 652 292 69 1 chr10 103949124 103949342 -36367423 - MIR SINE MIR -2 260 30 597 267 62 0 chr10 103949680 103949841 -36366924 - MIR SINE MIR -56 206 36 2222 73 30 33 chr10 103950699 103951002 -36365763 - AluSq SINE Alu -11 302 1 194 220 20 20 chr10 103951133 103951183 -36365582 - L2 LINE L2 0 3272 3223 325 321 103 24 chr10 103955987 103956152 -36360613 - MIR SINE MIR -51 211 34 288 0 0 0 chr10 103956317 103956349 -36360416 + (T)n Simple_repeat Simple_repeat 1 32 0 679 281 86 64 chr10 103956433 103956746 -36360019 - L2 LINE L2 -2 3270 2951 598 295 97 10 chr10 103956853 103957141 -36359624 - L2 LINE L2 -509 2805 2493 236 203 78 16 chr10 103957129 103957193 -36359572 - L3 LINE CR1 -275 1302 1235 * 234 299 121 52 chr10 103958283 103958457 -36358308 + L3 LINE CR1 1378 1563 -14 2248 117 3 0 chr10 103958664 103958963 -36357802 + AluSx SINE Alu 1 300 -12 286 248 142 50 chr10 103958968 103959186 -36357579 + L1ME4a LINE L1 5755 5992 -129 448 217 35 9 chr10 103959354 103959469 -36357296 - L3 LINE CR1 -227 1350 1233 398 192 51 0 chr10 103960020 103960098 -36356667 + MLT2C1 LTR ERVL 1 82 -315 1864 239 65 44 chr10 103960476 103960843 -36355922 - L1ME3 LINE L1 -47 6115 5730 1869 119 44 133 chr10 103960843 103961279 -36355486 - MLT2C1 LTR ERVL 0 397 1 1864 239 65 44 chr10 103961279 103961498 -36355267 - L1ME3 LINE L1 -432 5730 5517 2558 51 0 35 chr10 103961502 103961818 -36354947 + AluY SINE Alu 1 305 -6 1802 134 24 24 chr10 103961830 103962122 -36354643 + AluSx SINE Alu 1 292 -20 5100 188 126 78 chr10 103962159 103962369 -36354396 - L1MC4 LINE L1 0 8042 7844 2556 54 3 16 chr10 103962369 103962684 -36354081 + AluY SINE Alu 1 311 0 5100 188 126 78 chr10 103962684 103963838 -36352927 - L1MC4 LINE L1 -198 7844 6586 210 37 0 0 chr10 103963838 103963865 -36352900 + (CA)n Simple_repeat Simple_repeat 2 28 0 5100 188 126 78 chr10 103963865 103964098 -36352667 - L1MC4 LINE L1 -1456 6586 6366 387 167 28 14 chr10 103964222 103964294 -36352471 - U13 snRNA snRNA -31 73 1 2131 124 3 7 chr10 103964882 103965189 -36351576 + AluSg1 SINE Alu 1 306 -3 2457 86 0 6 chr10 103965192 103965505 -36351260 + AluSx SINE Alu 1 311 -1 456 275 15 46 chr10 103966645 103966776 -36349989 - MIR SINE MIR -75 187 61 265 339 16 16 chr10 103967506 103967633 -36349132 + U2 snRNA snRNA 5 131 -57 408 295 7 27 chr10 103967871 103968020 -36348745 - MIR SINE MIR -70 192 47 346 97 32 0 chr10 103968394 103968456 -36348309 + L2 LINE L2 2938 3001 -312 1858 142 21 0 chr10 103968492 103968774 -36347991 - AluSx SINE Alu -24 288 1 2142 102 0 3 chr10 103968784 103969102 -36347663 - AluSg SINE Alu 0 310 1 1621 168 3 17 chr10 103969112 103969403 -36347362 - AluJb SINE Alu -25 287 1 862 269 172 7 chr10 103969403 103969682 -36347083 + L2 LINE L2 2988 3312 -1 227 301 24 98 chr10 103969680 103969803 -36346962 - MIR SINE MIR -68 194 81 * 216 215 77 31 chr10 103970576 103970641 -36346124 + MIR SINE MIR 122 189 -73 418 213 62 0 chr10 103970645 103970725 -36346040 + AluS SINE Alu 2 86 -226 1731 88 4 0 chr10 103970825 103971051 -36345714 - AluSg SINE Alu -45 265 39 456 309 135 20 chr10 103971051 103971400 -36345365 + L2 LINE L2 2925 3313 0 461 147 39 0 chr10 103971476 103971580 -36345185 - MER5A DNA MER1_type -77 112 4 591 104 0 0 chr10 103971597 103971702 -36345063 + AluSp/q SINE Alu 210 314 0 379 197 8 126 chr10 103971702 103971829 -36344936 + MER5B DNA MER1_type 59 170 -8 349 258 32 97 chr10 103971872 103972058 -36344707 - MIR SINE MIR -71 191 18 26 50 0 0 chr10 103972526 103972566 -36344199 + AT_rich Low_complexity Low_complexity 1 40 0 273 266 8 31 chr10 103972614 103972742 -36344023 - MER113 DNA MER1_type? -365 156 32 2626 81 53 0 chr10 103973641 103973999 -36342766 - MER51B LTR ERV1 0 377 1 790 207 49 44 chr10 103974064 103974125 -36342640 - MIR SINE MIR -3 259 200 1784 160 3 0 chr10 103974125 103974413 -36342352 + AluJo SINE Alu 4 292 -20 790 207 49 44 chr10 103974413 103974554 -36342211 - MIR SINE MIR -62 200 56 482 260 186 11 chr10 103974651 103974828 -36341937 + MIR SINE MIR 37 244 -18 1383 161 13 68 chr10 103975426 103975575 -36341190 - AluJo SINE Alu 0 312 156 2497 48 0 3 chr10 103975575 103975885 -36340880 - AluY SINE Alu -2 309 1 1383 161 13 68 chr10 103975885 103975939 -36340826 - AluJo SINE Alu -156 156 101 2251 84 0 3 chr10 103975939 103976235 -36340530 - AluSx SINE Alu -17 295 1 1383 161 13 68 chr10 103976235 103976363 -36340402 - AluJo SINE Alu -211 101 17 954 190 0 6 chr10 103976544 103976723 -36340042 + AluJb SINE Alu 133 310 -2 1571 202 71 41 chr10 103977071 103977301 -36339464 - Charlie4a DNA MER1_type -1485 476 254 2037 110 10 0 chr10 103977301 103977601 -36339164 - AluSp SINE Alu -9 304 2 1571 202 71 41 chr10 103977601 103977806 -36338959 - Charlie4a DNA MER1_type -1707 254 28 2130 88 3 3 chr10 103978741 103979037 -36337728 - AluSx SINE Alu -16 296 1 304 292 34 0 chr10 103979090 103979179 -36337586 - MER81 DNA DNA -4 110 19 291 196 0 0 chr10 103979182 103979233 -36337532 - MER81 DNA DNA -63 51 1 2398 65 0 7 chr10 103979321 103979627 -36337138 - AluY SINE Alu -7 304 1 27 73 0 0 chr10 103979724 103979779 -36336986 + AT_rich Low_complexity Low_complexity 1 55 0 425 254 8 31 chr10 103979856 103979986 -36336779 - LTR67 LTR ERVL -19 538 412 1023 226 5 0 chr10 103980015 103980214 -36336551 - MER58A DNA MER1_type -12 212 13 288 0 0 0 chr10 103980312 103980344 -36336421 + (TG)n Simple_repeat Simple_repeat 1 32 0 5189 81 25 30 chr10 103980375 103980417 -36336348 - L1MA2 LINE L1 -4 6300 6259 270 56 0 0 chr10 103980417 103980453 -36336312 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1922 127 7 0 chr10 103980454 103980738 -36336027 - AluSx SINE Alu -26 286 1 5189 81 25 30 chr10 103980738 103981138 -36335627 - L1MA2 LINE L1 -45 6259 5859 1737 112 33 26 chr10 103981138 103981442 -36335323 + AluSx SINE Alu 5 310 -2 5189 81 25 30 chr10 103981442 103981765 -36335000 - L1MA2 LINE L1 -445 5859 5536 332 148 115 0 chr10 103982254 103982315 -36334450 + tRNA-Glu-GAG tRNA tRNA 5 72 -3 249 369 39 10 chr10 103982487 103982590 -36334175 - MIR SINE MIR -87 121 16 330 26 0 0 chr10 103982895 103982934 -36333831 + (TG)n Simple_repeat Simple_repeat 2 40 0 2109 119 3 0 chr10 103983305 103983607 -36333158 - AluSp SINE Alu -10 303 1 363 221 200 0 chr10 103983648 103983743 -36333022 + MER81 DNA DNA 1 114 0 758 249 78 18 chr10 103983767 103983984 -36332781 - MIR SINE MIR -26 236 7 816 266 141 49 chr10 103984165 103984537 -36332228 + L1MC4a LINE L1 4807 5143 -1003 2144 101 7 3 chr10 103984537 103984844 -36331921 + AluSg1 SINE Alu 1 308 -1 816 266 141 49 chr10 103984844 103985070 -36331695 + L1MC4a LINE L1 5143 5347 -799 1662 199 7 0 chr10 103985070 103985377 -36331388 + AluJb SINE Alu 1 309 -3 816 266 141 49 chr10 103985377 103985675 -36331090 + L1MC4a LINE L1 5347 5202 -944 186 103 0 0 chr10 103985675 103985704 -36331061 + (AGTAG)n Simple_repeat Simple_repeat 2 30 0 816 266 141 49 chr10 103985704 103985824 -36330941 + L1MC4a LINE L1 5201 5309 -837 811 188 0 0 chr10 103985841 103985974 -36330791 + AluJb SINE Alu 168 300 -12 705 242 106 0 chr10 103986111 103986272 -36330493 + MER45A DNA AcHobo 1 178 0 2314 78 13 0 chr10 103986337 103986645 -36330120 - AluSq SINE Alu -1 312 1 1979 112 7 26 chr10 103986903 103987207 -36329558 + AluSx SINE Alu 3 300 -12 22 35 0 0 chr10 103987465 103987494 -36329271 + AT_rich Low_complexity Low_complexity 1 29 0 1198 167 0 19 chr10 103988244 103988368 -36328397 - AluJo SINE Alu -22 290 170 2186 126 32 29 chr10 103988368 103988742 -36328023 + THE1C LTR MaLR 1 375 0 1198 167 0 19 chr10 103988742 103988827 -36327938 - AluJo SINE Alu -142 170 85 1616 148 20 36 chr10 103988851 103989156 -36327609 + AluJo SINE Alu 1 300 -12 534 246 66 38 chr10 103989293 103989476 -36327289 - MIR SINE MIR -50 212 25 322 295 98 18 chr10 103989510 103989622 -36327143 + MER5A DNA MER1_type 18 138 -51 4034 150 8 51 chr10 103989650 103989917 -36326848 - L1MB3 LINE L1 -8 6175 5898 1480 186 26 20 chr10 103989917 103990223 -36326542 + AluJo SINE Alu 1 308 -4 4034 150 8 51 chr10 103990223 103990721 -36326044 - L1MB3 LINE L1 -285 5898 5443 340 260 0 0 chr10 103991736 103991809 -36324956 - MIR SINE MIR -105 157 85 1095 161 18 51 chr10 103991944 103991966 -36324799 + L1MB7 LINE L1 5925 5946 -237 1735 151 6 25 chr10 103991966 103992284 -36324481 + AluJo SINE Alu 1 312 0 1095 161 18 51 chr10 103992284 103992390 -36324375 + L1MB7 LINE L1 5946 6054 -129 1582 174 37 10 chr10 103992390 103992689 -36324076 + AluJb SINE Alu 1 307 -5 1095 161 18 51 chr10 103992689 103992810 -36323955 + L1MB7 LINE L1 6054 6174 -9 472 325 64 8 chr10 103993084 103993333 -36323432 + L3 LINE CR1 1233 1495 -82 1911 135 0 0 chr10 103993607 103993916 -36322849 - AluSx SINE Alu 0 309 1 544 263 54 75 chr10 103993945 103994095 -36322670 + MIR SINE MIR 2 147 -115 2089 102 40 7 chr10 103994095 103994398 -36322367 + AluSq SINE Alu 1 313 0 544 263 54 75 chr10 103994398 103994487 -36322278 + MIR SINE MIR 147 236 -26 2054 110 10 0 chr10 103995006 103995307 -36321458 - AluY SINE Alu -7 304 1 1781 169 3 0 chr10 103995309 103995599 -36321166 - AluJo SINE Alu -21 291 1 547 262 111 0 chr10 103995971 103996143 -36320622 - MIR SINE MIR -7 255 65 396 309 163 31 chr10 103997168 103997488 -36319277 + L2 LINE L2 2426 2787 -527 493 300 36 54 chr10 103997501 103997724 -36319041 - L2 LINE L2 -6 3307 3089 271 44 44 0 chr10 103997747 103997792 -36318973 + (GA)n Simple_repeat Simple_repeat 1 47 0 524 304 93 63 chr10 103997904 103998169 -36318596 - L2 LINE L2 -397 2917 2661 2319 163 3 3 chr10 103998169 103998556 -36318209 + MLT1B LTR MaLR 3 389 -1 524 304 93 63 chr10 103998556 103998583 -36318182 - L2 LINE L2 -653 2661 2636 1974 114 45 0 chr10 103998583 103998872 -36317893 + AluSg SINE Alu 1 302 -8 524 304 93 63 chr10 103998872 103999114 -36317651 - L2 LINE L2 -678 2636 2366 312 169 65 0 chr10 103999220 103999297 -36317468 - L1MC2 LINE L1 0 6344 6263 1617 177 7 7 chr10 103999313 103999618 -36317147 - AluJb SINE Alu -7 305 1 2161 139 34 0 chr10 103999688 104000070 -36316695 - L1MA8 LINE L1 -5 6286 5892 414 287 102 78 chr10 104000278 104000571 -36316194 + L2 LINE L2 2968 3267 -5 289 306 0 0 chr10 104001136 104001208 -36315557 + MIR SINE MIR 50 121 -87 2037 100 7 3 chr10 104001588 104001877 -36314888 - AluSq SINE Alu -15 298 9 22 0 0 0 chr10 104001935 104001957 -36314808 + AT_rich Low_complexity Low_complexity 1 22 0 2120 118 3 0 chr10 104001957 104002261 -36314504 + AluSx SINE Alu 1 305 -7 314 361 24 0 chr10 104002276 104002445 -36314320 + GA-rich Low_complexity Low_complexity 3 175 0 1728 183 0 3 chr10 104002493 104002799 -36313966 + AluJb SINE Alu 1 305 -7 370 362 151 0 chr10 104003168 104003320 -36313445 + MER91A DNA MER1_type 1 175 -21 355 219 42 67 chr10 104003500 104003619 -36313146 - MIR SINE MIR -75 187 72 448 129 47 47 chr10 104004230 104004315 -36312450 + MIR SINE MIR 61 145 -117 249 244 33 56 chr10 104004643 104004733 -36312032 - L2 LINE L2 -62 3251 3164 1744 165 3 3 chr10 104004739 104005030 -36311735 - AluJb SINE Alu -13 299 9 321 358 46 12 chr10 104005453 104005626 -36311139 + MIR SINE MIR 17 195 -67 260 172 0 16 chr10 104006564 104006628 -36310137 + CT-rich Low_complexity Low_complexity 2 64 0 1618 151 44 4 chr10 104006628 104006899 -36309866 - AluJb SINE Alu -30 282 1 507 294 113 5 chr10 104007192 104007386 -36309379 + L3 LINE CR1 1178 1392 -185 203 408 10 0 chr10 104007552 104007650 -36309115 - L3 LINE CR1 -7 1570 1472 504 222 188 0 chr10 104008310 104008436 -36308329 + MIR SINE MIR 67 225 -37 456 19 0 0 chr10 104008436 104008489 -36308276 + (CA)n Simple_repeat Simple_repeat 2 54 0 504 222 188 0 chr10 104008489 104008506 -36308259 + MIR SINE MIR 224 237 -25 1806 111 9 84 chr10 104008579 104008913 -36307852 - AluSx SINE Alu -3 309 1 1634 169 7 17 chr10 104008915 104009210 -36307555 - AluJo SINE Alu -20 292 1 657 197 103 67 chr10 104009674 104009833 -36306932 + L1ME3A LINE L1 5455 5626 -544 2477 63 0 13 chr10 104009833 104010149 -36306616 + AluSx SINE Alu 1 312 0 657 197 103 67 chr10 104010149 104010212 -36306553 + L1ME3A LINE L1 5626 5685 -485 1200 154 10 5 chr10 104010220 104010421 -36306344 - MER3 DNA MER1_type 0 209 8 1912 213 58 20 chr10 104010435 104010885 -36305880 + L1ME3A LINE L1 5699 6165 -5 23 0 0 0 chr10 104011525 104011548 -36305217 + GC_rich Low_complexity Low_complexity 1 23 0 462 308 20 7 chr10 104012075 104012221 -36304544 - MIR SINE MIR -102 160 13 222 312 58 71 chr10 104012356 104012510 -36304255 - MIR3 SINE MIR -24 184 33 244 327 10 10 chr10 104013700 104013804 -36302961 - L2 LINE L2 -252 3020 2917 223 251 220 94 chr10 104013833 104014088 -36302677 + L2 LINE L2 3005 3291 -22 195 42 0 0 chr10 104014096 104014120 -36302645 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 251 203 0 34 chr10 104014495 104014554 -36302211 + CT-rich Low_complexity Low_complexity 1 57 0 1906 184 27 19 chr10 104115137 104115774 -36200991 + L1MB8 LINE L1 5462 6178 0 435 243 68 0 chr10 104115778 104115881 -36200884 - MLT1J LTR MaLR -306 205 96 1705 221 0 0 chr10 104116295 104116607 -36200158 - AluJb SINE Alu 0 312 1 2089 142 3 3 chr10 104116670 104116981 -36199784 - AluSx SINE Alu 0 312 2 312 328 43 0 chr10 104117971 104118087 -36198678 + L2 LINE L2 3168 3288 -25 389 253 0 0 chr10 104118600 104118687 -36198078 + HsTC2 DNA Tc2 1 87 -1811 1560 148 90 161 chr10 104118939 104119202 -36197563 - L1MB7 LINE L1 -7 6177 5884 542 145 0 0 chr10 104119202 104119285 -36197480 - AluJ/FLAM SINE Alu -229 83 1 1560 148 90 161 chr10 104119285 104119485 -36197280 - L1MB7 LINE L1 -300 5884 5671 3827 94 4 4 chr10 104119491 104120002 -36196763 - MER9 LTR ERVK 0 511 1 507 175 0 48 chr10 104120007 104120110 -36196655 - AluSc SINE Alu -98 211 114 1914 208 92 43 chr10 104120246 104120437 -36196328 - L1MB7 LINE L1 -887 5259 5079 2564 108 0 40 chr10 104120437 104120816 -36195949 + THE1B LTR MaLR 1 364 0 1914 208 92 43 chr10 104120816 104121231 -36195534 - L1MB7 LINE L1 -1067 5079 4623 1596 171 24 38 chr10 104121622 104121914 -36194851 + AluJb SINE Alu 4 291 -21 29 0 0 0 chr10 104121918 104121947 -36194818 + AT_rich Low_complexity Low_complexity 1 29 0 353 281 160 37 chr10 104122075 104122456 -36194309 + L1ME4a LINE L1 5511 5938 -183 1539 174 16 69 chr10 104122463 104122768 -36193997 + AluJo SINE Alu 1 289 -23 718 158 55 0 chr10 104122810 104122937 -36193828 - MER50 LTR ERV1 -23 711 578 295 316 45 28 chr10 104123116 104123363 -36193402 - Tigger3(Golem) DNA MER2_type -2764 265 15 565 223 45 50 chr10 104123397 104123599 -36193166 - AluSx SINE Alu -110 202 2 1856 137 17 7 chr10 104123602 104123895 -36192870 - MER46B DNA MER2_type -65 171 1 340 191 0 29 chr10 104123847 104123915 -36192850 + MER46A DNA MER2_type 97 162 -74 * 5742 154 20 23 chr10 104124001 104124735 -36192030 - L1MC1 LINE L1 -5 6328 5593 1597 181 56 3 chr10 104124735 104125023 -36191742 + AluJo SINE Alu 1 303 -9 5742 154 20 23 chr10 104125023 104125246 -36191519 - L1MC1 LINE L1 -740 5593 5372 1492 206 60 26 chr10 104125246 104125629 -36191136 - MSTD LTR MaLR 0 396 1 5742 154 20 23 chr10 104125629 104125679 -36191086 - L1MC1 LINE L1 -961 5372 5323 315 179 0 0 chr10 104125679 104125735 -36191030 - AluSq SINE Alu -2 298 243 772 170 0 15 chr10 104125898 104126033 -36190732 - FLAM_C SINE Alu 0 133 1 230 285 189 25 chr10 104126095 104126372 -36190393 + L2 LINE L2 2980 3272 0 244 269 108 21 chr10 104126395 104126488 -36190277 - L1MC/D LINE L1 -2144 5664 5564 1608 221 108 78 chr10 104126829 104127430 -36189335 - MER21B LTR ERV1 -149 714 96 1738 104 9 0 chr10 104127492 104127723 -36189042 - AluSq SINE Alu -78 235 3 234 0 0 0 chr10 104127802 104127828 -36188937 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2597 139 40 18 chr10 104128890 104129336 -36187429 - MLT1C LTR MaLR -2 465 10 1597 133 118 11 chr10 104129399 104129704 -36187061 - AluJo SINE Alu 0 312 1 855 146 0 29 chr10 104129822 104129959 -36186806 - FLAM_C SINE Alu 0 133 1 376 181 62 12 chr10 104130370 104130530 -36186235 + (TA)n Simple_repeat Simple_repeat 1 168 0 1507 116 168 0 chr10 104130532 104130782 -36185983 - AluJb SINE Alu -15 297 6 1080 244 141 81 chr10 104130862 104131368 -36185397 - MLT1G LTR MaLR 0 530 11 807 239 22 13 chr10 104131743 104131973 -36184792 - AluJo SINE Alu -10 302 71 416 176 0 0 chr10 104132136 104132204 -36184561 - AluJo SINE Alu -244 68 1 348 242 74 91 chr10 104132256 104132692 -36184073 + L1MCc LINE L1 11 781 -5641 1606 144 57 33 chr10 104132802 104133101 -36183664 + AluJo SINE Alu 1 306 -6 499 358 99 26 chr10 104133116 104133460 -36183305 + L2 LINE L2 1028 1432 -1882 2393 91 0 0 chr10 104133460 104133758 -36183007 + AluSx SINE Alu 1 298 -14 499 358 99 26 chr10 104133758 104133986 -36182779 + L2 LINE L2 1432 1642 -1672 655 254 108 12 chr10 104134179 104134419 -36182346 + LTR33A LTR ERVL 221 483 -40 1688 186 3 14 chr10 104134419 104134710 -36182055 + AluJo SINE Alu 1 288 -24 750 189 0 0 chr10 104134718 104134850 -36181915 + FLAM_C SINE Alu 1 132 -1 201 74 0 0 chr10 104134850 104134877 -36181888 + (GA)n Simple_repeat Simple_repeat 1 27 0 385 187 120 0 chr10 104134907 104134982 -36181783 + AluJ/FLAM SINE Alu 1 84 -218 423 0 0 0 chr10 104134996 104135043 -36181722 + (TTA)n Simple_repeat Simple_repeat 3 49 0 413 272 96 68 chr10 104135044 104135201 -36181564 - MIR SINE MIR -4 258 89 1630 168 18 4 chr10 104135201 104135329 -36181436 + AluJb SINE Alu 1 126 -181 369 0 0 0 chr10 104135329 104135370 -36181395 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 1630 168 18 4 chr10 104135370 104135544 -36181221 + AluJb SINE Alu 126 307 0 413 272 96 68 chr10 104135544 104135635 -36181130 - MIR SINE MIR -173 89 2 799 178 0 22 chr10 104135750 104135885 -36180880 - FLAM_C SINE Alu -1 132 1 2109 130 111 51 chr10 104136072 104136502 -36180263 + MER4A LTR ERV1 1 332 -133 1926 125 179 16 chr10 104136502 104136870 -36179895 + MSTA LTR MaLR 1 428 0 2109 130 111 51 chr10 104136870 104137009 -36179756 + MER4A LTR ERV1 332 461 -4 254 271 29 0 chr10 104137053 104137123 -36179642 - AluSc SINE Alu -2 297 226 1590 99 38 0 chr10 104137248 104137460 -36179305 - AluSx SINE Alu -92 220 1 243 244 0 0 chr10 104137987 104138032 -36178733 + MER66A LTR ERV1 290 334 -144 1017 144 0 0 chr10 104138069 104138222 -36178543 - AluSg/x SINE Alu -6 306 154 380 138 0 0 chr10 104138222 104138280 -36178485 - AluS SINE Alu -250 58 1 1944 145 0 14 chr10 104139083 104139379 -36177386 + AluJb SINE Alu 1 292 -20 196 270 0 0 chr10 104139674 104139711 -36177054 - L2 LINE L2 -88 3184 3148 271 304 101 40 chr10 104139779 104140006 -36176759 - L2 LINE L2 -162 3110 2870 661 241 23 29 chr10 104140195 104140369 -36176396 - LTR16A1 LTR ERVL -1 456 284 272 339 92 0 chr10 104140606 104140736 -36176029 + MIR3 SINE MIR 49 190 -18 1586 133 16 19 chr10 104141169 104141425 -36175340 - AluJb SINE Alu -16 296 42 744 275 18 9 chr10 104142486 104142715 -36174050 + MIR SINE MIR 25 255 -7 228 267 12 81 chr10 104142740 104142826 -36173939 - L2 LINE L2 -21 3292 3213 244 231 0 0 chr10 104142872 104142924 -36173841 - L2 LINE L2 -78 3235 3184 487 157 26 78 chr10 104143133 104143248 -36173517 + MLT1D LTR MaLR 1 109 -517 1920 138 7 3 chr10 104143248 104143530 -36173235 + AluJo SINE Alu 1 283 -29 1295 173 31 24 chr10 104143530 104143778 -36172987 + MLT1D LTR MaLR 256 505 0 219 247 49 25 chr10 104144148 104144229 -36172536 - MIR SINE MIR -158 104 22 428 186 9 0 chr10 104144412 104144525 -36172240 + GA-rich Low_complexity Low_complexity 1 114 0 2295 118 3 0 chr10 104144702 104145008 -36171757 + AluSx SINE Alu 1 307 -5 234 324 76 36 chr10 104145164 104145414 -36171351 + L2 LINE L2 2996 3255 -58 561 252 111 13 chr10 104145552 104145778 -36170987 + L2 LINE L2 2084 2331 -983 1785 160 16 23 chr10 104145849 104146155 -36170610 - AluJb SINE Alu -8 304 1 2312 112 0 10 chr10 104146328 104146641 -36170124 - AluSg SINE Alu 0 310 1 299 292 42 0 chr10 104146817 104146937 -36169828 - HAL1b LINE L1 -7 1341 1217 658 279 166 17 chr10 104147011 104147312 -36169453 + L2 LINE L2 2429 2774 -540 1955 160 0 0 chr10 104147319 104147601 -36169164 + AluJo SINE Alu 1 282 -30 886 205 0 11 chr10 104147622 104147807 -36168958 + AluJo SINE Alu 122 304 -8 1034 279 41 39 chr10 104147840 104148278 -36168487 + L2 LINE L2 2875 3313 0 271 237 129 29 chr10 104148283 104148422 -36168343 - HAL1b LINE L1 -175 1173 1021 670 173 0 58 chr10 104148436 104148575 -36168190 + FLAM_C SINE Alu 3 133 0 1216 181 7 48 chr10 104148836 104149106 -36167659 + AluJo SINE Alu 34 292 -20 576 223 218 44 chr10 104149120 104149349 -36167416 + MLT1J LTR MaLR 243 511 0 2274 108 13 3 chr10 104149716 104150021 -36166744 - AluSc SINE Alu -1 308 1 3493 129 30 7 chr10 104150357 104150917 -36165848 - L1MA7 LINE L1 -67 6224 5652 919 126 0 15 chr10 104150952 104151087 -36165678 + FLAM_C SINE Alu 1 133 0 337 269 150 0 chr10 104151333 104151493 -36165272 + HAL1b LINE L1 637 820 -528 1947 55 0 4 chr10 104151609 104151845 -36164920 + AluY SINE Alu 76 310 -1 274 265 167 11 chr10 104151879 104152143 -36164622 + L2 LINE L2 2824 3128 -185 272 100 0 0 chr10 104152306 104152346 -36164419 + Alu SINE Alu 255 294 -8 1819 171 4 0 chr10 104153216 104153496 -36163269 - AluJo SINE Alu -31 281 1 1727 140 88 0 chr10 104153502 104153774 -36162991 - AluJb SINE Alu -16 296 1 2222 102 37 35 chr10 104154244 104154618 -36162147 - THE1C LTR MaLR 0 375 1 317 340 6 36 chr10 104154640 104154802 -36161963 - MIR SINE MIR -65 143 38 2088 93 4 4 chr10 104154964 104155232 -36161533 + AluSq SINE Alu 1 268 -45 379 62 0 46 chr10 104155236 104155301 -36161464 + AluSp/q SINE Alu 240 301 -2 237 65 0 0 chr10 104155441 104155472 -36161293 + (CA)n Simple_repeat Simple_repeat 2 32 0 855 127 0 0 chr10 104155728 104155846 -36160919 - AluSx SINE Alu -137 175 58 2248 155 48 19 chr10 104156962 104157395 -36159370 + L1MB4 LINE L1 5734 6179 -1 242 129 0 97 chr10 104158558 104158620 -36158145 - L1MC4 LINE L1 -1339 6703 6648 2481 70 7 0 chr10 104158623 104158923 -36157842 - AluSg SINE Alu -8 302 1 2003 145 3 3 chr10 104159505 104159809 -36156956 + AluSx SINE Alu 1 304 -8 3862 162 96 29 chr10 104160440 104160508 -36156257 - L1MB7 LINE L1 -5 6179 6117 2273 100 0 22 chr10 104160508 104160827 -36155938 - AluSx SINE Alu 0 312 1 3862 162 96 29 chr10 104160827 104161495 -36155270 - L1MB7 LINE L1 -67 6117 5377 2646 37 0 0 chr10 104161495 104161793 -36154972 - AluY SINE Alu -13 298 1 3862 162 96 29 chr10 104161793 104161895 -36154870 - L1MB7 LINE L1 -807 5377 5283 2399 85 0 0 chr10 104162038 104162332 -36154433 - AluSg SINE Alu -16 294 1 314 270 0 111 chr10 104162335 104162461 -36154304 + L2 LINE L2 3153 3264 -8 469 271 32 37 chr10 104162946 104163134 -36153631 - LTR16A LTR ERVL -239 211 25 273 269 183 0 chr10 104163489 104163593 -36153172 + MIR SINE MIR 51 173 -89 1007 104 0 0 chr10 104163980 104164105 -36152660 - AluSq/x SINE Alu -184 129 5 26 0 0 0 chr10 104164119 104164145 -36152620 + AT_rich Low_complexity Low_complexity 1 26 0 2366 107 0 3 chr10 104164295 104164605 -36152160 - AluSg SINE Alu -1 309 1 205 163 61 0 chr10 104164974 104165023 -36151742 - MIR SINE MIR -129 133 82 21 57 0 0 chr10 104166292 104166327 -36150438 + AT_rich Low_complexity Low_complexity 1 35 0 775 143 63 0 chr10 104168922 104169048 -36147717 - AluJo SINE Alu -178 134 2 769 219 39 19 chr10 104169048 104169203 -36147562 - FRAM SINE Alu -7 159 2 374 314 25 6 chr10 104170532 104170712 -36146053 + MER20 DNA MER1_type 34 219 0 2663 32 0 6 chr10 104171693 104172006 -36144759 - AluYa5 SINE Alu 0 311 1 751 294 3 24 chr10 104172206 104172495 -36144270 + AluJo SINE Alu 1 283 -19 544 309 151 3 chr10 104173391 104173708 -36143057 + L1ME LINE L1 127 490 -5715 419 347 81 27 chr10 104173729 104174026 -36142739 + L1ME LINE L1 1401 1722 -854 3092 269 104 47 chr10 104174319 104176143 -36140622 + L1ME LINE L1 2133 3851 -2382 2075 156 0 0 chr10 104176143 104176432 -36140333 + AluJb SINE Alu 1 289 -23 3092 269 104 47 chr10 104176432 104178055 -36138710 + L1ME LINE L1 3851 5730 -503 930 224 65 32 chr10 104178055 104178363 -36138402 - MER5C DNA MER1_type -5 319 2 231 273 13 13 chr10 104178395 104178472 -36138293 + L1ME LINE L1 5745 5821 -418 26 30 0 0 chr10 104178840 104178873 -36137892 + AT_rich Low_complexity Low_complexity 1 33 0 244 287 32 14 chr10 104179688 104179781 -36136984 - MIR SINE MIR -62 146 81 489 245 122 27 chr10 104179894 104180041 -36136724 - MER91A DNA MER1_type -3 193 33 693 155 0 0 chr10 104180323 104180439 -36136326 + Tigger4(Zombi) DNA MER2_type 2616 2731 0 314 366 24 8 chr10 104180457 104180580 -36136185 + L3 LINE CR1 1441 1565 -12 2525 66 0 3 chr10 104180776 104181077 -36135688 - AluY SINE Alu -11 300 1 2003 131 3 3 chr10 104181124 104181414 -36135351 - AluSq SINE Alu -20 293 4 2045 141 0 31 chr10 104181528 104181847 -36134918 + AluJb SINE Alu 1 309 -3 2302 99 0 13 chr10 104184072 104184375 -36132390 - AluSq SINE Alu -14 299 1 304 125 0 171 chr10 104184553 104184641 -36132124 + LTR9 LTR ERV1 457 529 -83 1587 141 0 0 chr10 104185181 104185431 -36131334 + AluJo SINE Alu 55 304 0 33 0 0 0 chr10 104185740 104185773 -36130992 + AT_rich Low_complexity Low_complexity 1 33 0 645 318 52 43 chr10 104185875 104186224 -36130541 - L2 LINE L2 -611 2703 2352 1632 197 10 17 chr10 104186802 104187102 -36129663 - AluJo SINE Alu -14 298 1 373 325 39 10 chr10 104187337 104187540 -36129225 + L1ME LINE L1 5529 5737 -384 590 289 45 8 chr10 104187802 104188156 -36128609 + L1MC/D LINE L1 5283 5582 -580 525 239 93 19 chr10 104188656 104188861 -36127904 + MER112 DNA MER1_type 1 220 -40 228 35 0 0 chr10 104190121 104190150 -36126615 + (GA)n Simple_repeat Simple_repeat 2 30 0 2514 178 65 2 chr10 104190471 104190978 -36125787 + MER68 LTR ERV1 1 539 -23 28 48 0 0 chr10 104191102 104191144 -36125621 + AT_rich Low_complexity Low_complexity 1 42 0 189 373 114 20 chr10 104191669 104191870 -36124895 - L2 LINE L2 -542 2772 2553 212 256 47 23 chr10 104191975 104192061 -36124704 - MIR SINE MIR -112 150 63 2215 118 3 0 chr10 104192171 104192467 -36124298 + AluSx SINE Alu 1 297 -15 777 115 0 18 chr10 104193844 104193957 -36122808 + MER5A DNA MER1_type 1 111 -78 426 254 102 0 chr10 104194020 104194138 -36122627 - MIR SINE MIR -14 248 119 494 177 21 0 chr10 104194159 104194255 -36122510 + L1MC1 LINE L1 6236 6333 0 2283 121 0 0 chr10 104194789 104195087 -36121678 - AluSx SINE Alu -14 298 1 221 298 0 0 chr10 104195636 104195683 -36121082 - L2 LINE L2 -89 3183 3137 201 39 0 0 chr10 104195714 104195740 -36121025 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 2181 114 10 0 chr10 104196844 104197142 -36119623 - AluSx SINE Alu -11 301 1 316 97 48 16 chr10 104197537 104197599 -36119166 - Alu SINE Alu -235 64 1 24 61 0 0 chr10 104197607 104197640 -36119125 + AT_rich Low_complexity Low_complexity 1 33 0 940 120 0 0 chr10 104197982 104198115 -36118650 - FLAM_C SINE Alu 0 133 1 282 390 9 0 chr10 104198186 104198291 -36118474 - MIR3 SINE MIR -42 166 61 1579 112 32 18 chr10 104202525 104202802 -36113963 - MER1B DNA MER1_type -58 281 1 1034 187 98 35 chr10 104204113 104204429 -36112336 - MER46C DNA MER2_type -1 337 2 1107 161 6 6 chr10 104205465 104205639 -36111126 - FAM SINE Alu 0 49 1 2073 147 10 0 chr10 104205660 104205960 -36110805 - AluJb SINE Alu -9 303 1 2226 114 3 0 chr10 104207476 104207766 -36108999 + AluSx SINE Alu 1 291 -21 452 254 198 28 chr10 104208661 104208878 -36107887 - MIR SINE MIR 0 262 9 317 222 11 44 chr10 104210952 104211042 -36105723 - MIR SINE MIR -70 192 106 1130 135 0 0 chr10 104211586 104211742 -36105023 - AluSg/x SINE Alu -20 292 137 2520 66 3 0 chr10 104213986 104214291 -36102474 - AluY SINE Alu -5 306 1 2287 108 3 7 chr10 104214997 104215303 -36101462 + AluSx SINE Alu 1 305 -7 555 284 44 12 chr10 104215693 104215943 -36100822 + L1MB8 LINE L1 5921 6178 0 371 254 93 93 chr10 104216329 104216534 -36100231 + MIR3 SINE MIR 1 205 -3 2459 70 0 0 chr10 104216645 104216945 -36099820 - AluY SINE Alu -11 300 1 459 114 0 14 chr10 104217178 104217248 -36099517 + MER1B DNA MER1_type 271 339 0 3343 144 25 29 chr10 104217258 104217943 -36098822 + L1MB8 LINE L1 4621 5302 -844 324 153 139 28 chr10 104217952 104218024 -36098741 + AluSc SINE Alu 103 182 -117 22 56 0 0 chr10 104218035 104218071 -36098694 + AT_rich Low_complexity Low_complexity 1 36 0 858 166 13 0 chr10 104218316 104218473 -36098292 + L1MB8 LINE L1 5620 5778 -400 237 209 0 146 chr10 104218473 104218583 -36098182 + AluJo SINE Alu 33 126 -176 1340 170 27 98 chr10 104218598 104218933 -36097832 + AluJo SINE Alu 1 311 -1 1233 132 16 16 chr10 104218954 104219118 -36097647 + AluJo SINE Alu 120 302 -10 1997 176 12 24 chr10 104219118 104219532 -36097233 + L1MB8 LINE L1 5770 6178 0 1447 112 0 52 chr10 104219545 104219777 -36096988 + AluSq SINE Alu 1 220 -93 2038 119 0 0 chr10 104219777 104220045 -36096720 - AluSx SINE Alu -35 277 10 2035 142 10 3 chr10 104220923 104221233 -36095532 - AluSx SINE Alu 0 312 1 601 157 126 47 chr10 104221234 104221333 -36095432 - L1MC4 LINE L1 -867 7175 7085 387 60 0 0 chr10 104221333 104221383 -36095382 + (CA)n Simple_repeat Simple_repeat 1 50 0 601 157 126 47 chr10 104221383 104221474 -36095291 - L1MC4 LINE L1 -957 7085 6970 634 210 65 117 chr10 104221477 104221516 -36095249 + L1MC4 LINE L1 7575 7614 -428 1698 167 41 24 chr10 104221516 104221809 -36094956 + AluJb SINE Alu 1 298 -14 634 210 65 117 chr10 104221809 104222078 -36094687 + L1MC4 LINE L1 7614 7867 -175 324 0 0 0 chr10 104223330 104223366 -36093399 + (CCTAA)n Simple_repeat Simple_repeat 2 37 0 1507 83 0 0 chr10 104223442 104223634 -36093131 + AluSq SINE Alu 1 192 -121 368 113 0 0 chr10 104223634 104223687 -36093078 + AluSq SINE Alu 241 293 -8 448 300 70 53 chr10 104224018 104224261 -36092504 + MIR SINE MIR 13 259 -3 1679 101 0 4 chr10 104224466 104224694 -36092071 - AluSg/x SINE Alu -10 300 74 2092 131 0 3 chr10 104224888 104225193 -36091572 + AluSx SINE Alu 1 304 -8 720 85 19 19 chr10 104225675 104225781 -36090984 - AluSq/x SINE Alu -206 107 2 645 154 94 17 chr10 104226422 104226539 -36090226 + AluJo SINE Alu 11 136 -176 2224 118 3 10 chr10 104229504 104229818 -36086947 + AluSp SINE Alu 1 312 -1 1328 162 0 5 chr10 104229829 104230039 -36086726 + MLT1A1 LTR MaLR 157 365 0 1010 172 11 11 chr10 104231249 104231423 -36085342 - MER5B DNA MER1_type -3 175 2 313 339 83 63 chr10 104232102 104232482 -36084283 + L2 LINE L2 2814 3206 -66 2077 109 0 4 chr10 104232482 104232756 -36084009 + AluSx SINE Alu 26 298 -14 313 339 83 63 chr10 104232756 104232818 -36083947 + L2 LINE L2 3206 3265 -7 1742 168 3 20 chr10 104234073 104234371 -36082394 + AluJb SINE Alu 1 293 -19 546 123 0 0 chr10 104235511 104235584 -36081181 + AluJo SINE Alu 125 197 -115 211 305 0 34 chr10 104237318 104237377 -36079388 - L2 LINE L2 -2 3270 3214 572 131 12 0 chr10 104237760 104237844 -36078921 - AluSg/x SINE Alu -11 298 214 180 111 0 0 chr10 104237844 104237871 -36078894 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 5889 124 97 49 chr10 104238805 104239094 -36077671 + Tigger3b DNA MER2_type 1 275 -2753 2417 82 0 0 chr10 104239094 104239388 -36077377 + AluY SINE Alu 1 294 -17 5889 124 97 49 chr10 104239388 104239675 -36077090 + Tigger3b DNA MER2_type 275 547 -2481 2168 120 6 22 chr10 104239675 104239992 -36076773 + AluJb SINE Alu 1 312 0 5889 124 97 49 chr10 104239992 104240348 -36076417 + Tigger3b DNA MER2_type 547 884 -2144 2493 81 7 0 chr10 104240348 104240657 -36076108 - AluSx SINE Alu -1 311 1 5889 124 97 49 chr10 104240657 104240895 -36075870 + Tigger3b DNA MER2_type 884 1230 -1 1740 144 43 37 chr10 104241026 104241325 -36075440 - AluJb SINE Alu -11 301 1 2183 88 3 20 chr10 104241361 104241656 -36075109 - AluSx SINE Alu -22 290 1 966 200 44 0 chr10 104242304 104242484 -36074281 - MER58A DNA MER1_type 0 224 37 25 83 0 0 chr10 104242810 104242870 -36073895 + AT_rich Low_complexity Low_complexity 1 60 0 486 251 96 12 chr10 104242912 104243079 -36073686 - MIR SINE MIR -26 236 56 1412 128 5 0 chr10 104243099 104243294 -36073471 + AluJo SINE Alu 23 218 -94 278 125 0 36 chr10 104243294 104243350 -36073415 + FAM SINE Alu 125 178 -1 231 348 29 0 chr10 104243382 104243451 -36073314 + MER5A DNA MER1_type 116 186 -3 250 325 217 6 chr10 104243462 104243628 -36073137 + MIR SINE MIR 23 223 -39 2073 203 116 47 chr10 104243628 104243807 -36072958 + MLT1F1 LTR MaLR 1 166 -401 225 0 0 0 chr10 104243807 104243832 -36072933 + (TC)n Simple_repeat Simple_repeat 1 25 0 2073 203 116 47 chr10 104243832 104244159 -36072606 + MLT1F1 LTR MaLR 166 542 -25 2055 108 40 4 chr10 104244182 104244460 -36072305 - AluSq SINE Alu -25 288 1 3590 166 11 23 chr10 104244500 104244578 -36072187 - L1MB3 LINE L1 -8 6175 6098 1968 159 3 3 chr10 104244578 104244873 -36071892 - AluJb SINE Alu -17 295 1 3590 166 11 23 chr10 104244873 104245458 -36071307 - L1MB3 LINE L1 -85 6098 5520 644 143 76 0 chr10 104247007 104247126 -36069639 + L1MB3 LINE L1 6056 6183 0 236 242 75 58 chr10 104247805 104247925 -36068840 - MIR SINE MIR -18 244 123 2223 86 3 13 chr10 104248096 104248400 -36068365 + AluSx SINE Alu 1 301 -11 321 68 0 0 chr10 104248720 104248764 -36068001 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 27 0 0 chr10 104249217 104249254 -36067511 + GC_rich Low_complexity Low_complexity 1 37 0 1936 131 24 7 chr10 104249602 104249893 -36066872 - AluJb SINE Alu -15 297 2 2081 118 0 3 chr10 104250917 104251226 -36065539 - AluSq SINE Alu 0 313 4 296 221 70 35 chr10 104251268 104251354 -36065411 + MIR SINE MIR 103 191 -71 269 333 54 0 chr10 104251709 104251802 -36064963 + L2 LINE L2 3143 3240 -32 2300 101 10 0 chr10 104252143 104252441 -36064324 - AluSq SINE Alu -12 301 1 1546 179 3 44 chr10 104252591 104252910 -36063855 + AluJo SINE Alu 1 306 -6 434 283 72 0 chr10 104253404 104253556 -36063209 + MIR SINE MIR 48 210 -52 645 236 95 54 chr10 104254613 104254719 -36062046 + MIR SINE MIR 1 101 -161 1070 177 20 15 chr10 104254719 104254922 -36061843 - MER3 DNA MER1_type -4 205 2 645 236 95 54 chr10 104254922 104255057 -36061708 + MIR SINE MIR 101 252 -10 1970 144 3 13 chr10 104255831 104256137 -36060628 - AluJo SINE Alu -9 303 1 2095 104 17 7 chr10 104256224 104256536 -36060229 + AluSg SINE Alu 2 310 0 41 58 0 0 chr10 104257298 104257367 -36059398 + AT_rich Low_complexity Low_complexity 1 69 0 2294 95 0 7 chr10 104257383 104257678 -36059087 - AluSx SINE Alu -19 293 1 2297 108 3 7 chr10 104258378 104258684 -36058081 + AluSx SINE Alu 1 305 -7 2260 108 7 0 chr10 104259088 104259384 -36057381 + AluSg SINE Alu 1 298 -12 2356 73 10 32 chr10 104260730 104261044 -36055721 - AluSg1 SINE Alu -2 307 1 1849 161 62 9 chr10 104261291 104261615 -36055150 - MSTD LTR MaLR 0 396 56 2413 96 0 0 chr10 104262121 104262422 -36054343 + AluSx SINE Alu 1 301 -11 3223 191 24 21 chr10 104262692 104263373 -36053392 + L1MB7 LINE L1 5489 6171 -13 302 254 93 93 chr10 104263768 104263973 -36052792 + MIR3 SINE MIR 1 205 -3 2495 70 0 0 chr10 104264084 104264384 -36052381 - AluY SINE Alu -11 300 1 2045 115 0 14 chr10 104264389 104264675 -36052090 - AluSx SINE Alu -18 294 13 2120 133 3 0 chr10 104264755 104265049 -36051716 - AluSg SINE Alu -15 295 1 480 192 0 0 chr10 104265280 104265358 -36051407 + L1M4 LINE L1 5489 5566 -608 296 295 70 66 chr10 104267234 104267342 -36049423 + L1MC/D LINE L1 5375 5481 -2327 2104 130 0 3 chr10 104267342 104267642 -36049123 + AluSx SINE Alu 1 299 -13 296 295 70 66 chr10 104267642 104267777 -36048988 + L1MC/D LINE L1 5481 5619 -2189 2149 129 0 3 chr10 104269312 104269615 -36047150 - AluSx SINE Alu -10 302 1 185 263 88 0 chr10 104270210 104270267 -36046498 + MIR SINE MIR 131 192 -70 304 286 0 0 chr10 104270320 104270404 -36046361 + L1MC5 LINE L1 7817 7900 -61 1562 158 14 21 chr10 104270426 104270705 -36046060 + AluJo SINE Alu 34 310 -2 2922 159 24 29 chr10 104270705 104271235 -36045530 - L1MB7 LINE L1 -280 5904 5376 2515 59 0 0 chr10 104271235 104271540 -36045225 - AluY SINE Alu -6 305 1 2922 159 24 29 chr10 104271540 104271588 -36045177 - L1MB7 LINE L1 -808 5376 5329 1798 71 0 0 chr10 104271951 104272175 -36044590 + AluY SINE Alu 69 292 -19 24 0 0 0 chr10 104272255 104272279 -36044486 + AT_rich Low_complexity Low_complexity 1 24 0 2295 88 3 10 chr10 104272282 104272590 -36044175 + AluSg SINE Alu 1 306 -4 645 140 73 0 chr10 104272611 104272747 -36044018 - L1MA8 LINE L1 -1 6290 6145 1048 176 6 0 chr10 104272748 104272913 -36043852 - FAM SINE Alu -9 166 1 2087 84 30 20 chr10 104273600 104273899 -36042866 - AluSg SINE Alu -8 302 1 873 87 79 0 chr10 104274966 104275092 -36041673 + AluJb SINE Alu 1 136 -176 2306 98 0 16 chr10 104275092 104275229 -36041536 + AluSx SINE Alu 1 139 -173 1835 128 4 4 chr10 104275229 104275510 -36041255 + AluSx SINE Alu 20 300 -12 2306 98 0 16 chr10 104275510 104275689 -36041076 + AluSx SINE Alu 139 312 0 580 121 44 0 chr10 104276625 104276716 -36040049 + AluY SINE Alu 95 189 -122 2270 87 0 19 chr10 104277017 104277327 -36039438 - AluSc SINE Alu -5 304 1 1901 124 3 3 chr10 104277691 104277974 -36038791 + AluSq SINE Alu 7 289 -24 723 115 0 0 chr10 104278300 104278404 -36038361 + U6 snRNA snRNA 1 104 -3 2185 104 0 0 chr10 104278650 104278948 -36037817 + AluSg SINE Alu 1 298 -12 2208 99 0 10 chr10 104279614 104279927 -36036838 + AluSg SINE Alu 1 310 0 2216 102 0 0 chr10 104280243 104280547 -36036218 - AluSx SINE Alu -3 309 6 229 318 14 122 chr10 104282216 104282364 -36034401 - L2 LINE L2 -2 3270 3139 611 129 0 0 chr10 104282658 104282743 -36034022 - AluSg/x SINE Alu -11 301 217 180 111 0 0 chr10 104282743 104282770 -36033995 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 6011 121 98 44 chr10 104283704 104283993 -36032772 + Tigger3b DNA MER2_type 1 273 -2755 2312 78 0 0 chr10 104283993 104284287 -36032478 + AluY SINE Alu 1 294 -17 6011 121 98 44 chr10 104284287 104284568 -36032197 + Tigger3b DNA MER2_type 273 537 -2491 2020 116 6 25 chr10 104284568 104284886 -36031879 + AluJb SINE Alu 1 312 0 6011 121 98 44 chr10 104284886 104285242 -36031523 + Tigger3b DNA MER2_type 537 872 -2156 2363 81 7 0 chr10 104285242 104285551 -36031214 - AluSx SINE Alu -1 311 1 6011 121 98 44 chr10 104285551 104285789 -36030976 + Tigger3b DNA MER2_type 872 1230 -1 1649 141 43 37 chr10 104285920 104286219 -36030546 - AluJb SINE Alu -11 301 1 2124 71 3 20 chr10 104286255 104286550 -36030215 - AluSx SINE Alu -22 290 1 290 44 0 22 chr10 104286554 104286599 -36030166 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 820 21 0 0 chr10 104286600 104286697 -36030068 - AluSg/x SINE Alu -36 276 180 395 281 164 0 chr10 104286712 104286840 -36029925 + L2 LINE L2 3160 3308 -5 198 0 0 0 chr10 104286878 104286900 -36029865 + (A)n Simple_repeat Simple_repeat 1 22 0 324 0 0 0 chr10 104287641 104287677 -36029088 + (CCTAA)n Simple_repeat Simple_repeat 2 37 0 1715 85 158 8 chr10 104287753 104288012 -36028753 + AluSq SINE Alu 1 298 -5 456 268 74 59 chr10 104288031 104288141 -36028624 - L1MC4 LINE L1 -71 7971 7864 1851 66 111 7 chr10 104288141 104288412 -36028353 + AluSc SINE Alu 1 299 -10 456 268 74 59 chr10 104288412 104288722 -36028043 - L1MC4 LINE L1 -178 7864 7545 1581 151 3 48 chr10 104288854 104289165 -36027600 + AluJo SINE Alu 1 297 -15 1834 145 54 8 chr10 104289408 104289714 -36027051 + L1MA4 LINE L1 4230 4557 -1589 1871 67 0 30 chr10 104289714 104289983 -36026782 + AluY SINE Alu 50 310 -1 1834 145 54 8 chr10 104289983 104290048 -36026717 + L1MA4 LINE L1 4557 4618 -1528 1555 160 50 4 chr10 104290058 104290320 -36026445 + MER1B DNA MER1_type 1 274 -65 253 0 26 26 chr10 104290364 104290402 -36026363 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2177 48 0 21 chr10 104290404 104290694 -36026071 - AluY SINE Alu -27 284 1 497 114 0 14 chr10 104290926 104290996 -36025769 + MER1B DNA MER1_type 271 339 0 3602 144 25 29 chr10 104291006 104291691 -36025074 + L1MA4 LINE L1 4621 5302 -844 458 209 86 75 chr10 104291700 104291811 -36024954 + AluJb SINE Alu 105 220 -92 1740 145 7 7 chr10 104291811 104292093 -36024672 - AluSx SINE Alu -30 282 1 458 209 86 75 chr10 104292093 104292168 -36024597 + AluJb SINE Alu 220 293 -19 5676 127 32 7 chr10 104292175 104293125 -36023640 + L1MA4 LINE L1 5324 6296 -4 293 125 71 0 chr10 104293139 104293195 -36023570 + L1MD3 LINE L1 7929 7988 -7 2281 90 0 3 chr10 104293284 104293583 -36023182 + AluSx SINE Alu 1 298 -14 1379 187 54 0 chr10 104293719 104293997 -36022768 + AluJo SINE Alu 6 298 -14 310 320 98 27 chr10 104294001 104294257 -36022508 - L2 LINE L2 -508 2806 2533 5190 86 40 74 chr10 104296021 104296068 -36020697 + SVA Other Other 5 52 -1336 1211 0 0 53 chr10 104296068 104296257 -36020508 + (TCTCCC)n Simple_repeat Simple_repeat 2 180 0 5190 86 40 74 chr10 104296257 104297560 -36019205 + SVA Other Other 52 868 -520 6109 60 30 61 chr10 104297577 104298555 -36018210 + SVA Other Other 433 1379 -7 1442 171 20 43 chr10 104298556 104298855 -36017910 + AluJo SINE Alu 21 312 0 379 326 23 0 chr10 104299043 104299175 -36017590 + MIR SINE MIR 19 153 -109 1043 78 0 0 chr10 104299187 104299316 -36017449 + AluSg SINE Alu 3 131 -179 296 183 23 145 chr10 104299318 104299372 -36017393 + MIR SINE MIR 148 178 -84 1839 68 19 23 chr10 104299372 104299638 -36017127 + AluSp SINE Alu 44 308 -5 296 183 23 145 chr10 104299638 104299714 -36017051 + MIR SINE MIR 178 262 0 2178 79 7 7 chr10 104301136 104301427 -36015338 + AluSg1 SINE Alu 1 291 -18 339 25 0 0 chr10 104301438 104301478 -36015287 + (CA)n Simple_repeat Simple_repeat 2 41 0 363 361 65 38 chr10 104301558 104302322 -36014443 + L2 LINE L2 1317 2101 -1213 23 0 0 0 chr10 104302523 104302546 -36014219 + AT_rich Low_complexity Low_complexity 1 23 0 306 343 154 15 chr10 104302630 104303027 -36013738 + L2 LINE L2 2153 2604 -710 670 151 57 0 chr10 104303100 104303206 -36013559 - FLAM_C SINE Alu -29 114 3 1967 116 0 17 chr10 104303336 104303629 -36013136 + AluSq SINE Alu 16 303 -10 259 266 31 0 chr10 104303629 104303693 -36013072 - Charlie8 DNA MER1_type -1003 1414 1349 * 883 266 65 46 chr10 104303691 104304059 -36012706 - Charlie8 DNA MER1_type -1926 491 117 552 167 147 0 chr10 104304126 104304228 -36012537 + AluJo/FLAM SINE Alu 2 118 -184 1914 144 3 0 chr10 104304231 104304523 -36012242 - AluSx SINE Alu -19 293 1 30 0 0 0 chr10 104304523 104304553 -36012212 + AT_rich Low_complexity Low_complexity 1 30 0 582 125 0 0 chr10 104304738 104304826 -36011939 + FLAM_C SINE Alu 56 143 0 1930 102 29 32 chr10 104304972 104305285 -36011480 - AluSx SINE Alu 0 312 1 1863 137 0 23 chr10 104307430 104307730 -36009035 - AluSx SINE Alu -19 293 1 1882 176 58 6 chr10 104308879 104309003 -36007762 + MLT1A1 LTR MaLR 1 117 -248 2125 107 3 0 chr10 104309003 104309302 -36007463 + AluSp SINE Alu 14 313 0 1882 176 58 6 chr10 104309302 104309524 -36007241 + MLT1A1 LTR MaLR 117 365 0 1009 172 11 11 chr10 104310734 104310908 -36005857 - MER5B DNA MER1_type -3 175 2 427 334 78 84 chr10 104311280 104311967 -36004798 + L2 LINE L2 2507 3204 -68 1962 109 0 4 chr10 104311967 104312241 -36004524 + AluSx SINE Alu 26 298 -14 427 334 78 84 chr10 104312241 104312303 -36004462 + L2 LINE L2 3204 3265 -7 1628 168 3 20 chr10 104313558 104313856 -36002909 + AluJb SINE Alu 1 293 -19 1079 129 0 43 chr10 104314996 104315182 -36001583 + AluSg/x SINE Alu 123 300 -9 2165 112 3 3 chr10 104315182 104315487 -36001278 + AluSx SINE Alu 1 305 -7 2138 107 10 3 chr10 104315487 104315795 -36000970 + AluSq SINE Alu 1 311 -2 393 22 0 0 chr10 104317435 104317481 -35999284 + (TG)n Simple_repeat Simple_repeat 1 46 0 349 299 136 7 chr10 104317511 104317658 -35999107 - MIR SINE MIR -60 202 37 249 33 0 0 chr10 104318664 104318694 -35998071 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1988 107 0 31 chr10 104318700 104318989 -35997776 - AluSx SINE Alu -32 280 1 1390 205 10 7 chr10 104320256 104320549 -35996216 - L1MC4 LINE L1 -484 7558 7265 434 129 0 0 chr10 104320594 104320656 -35996109 - AluSp SINE Alu -39 274 213 4336 129 164 24 chr10 104320656 104321636 -35995129 - MER11B LTR ERVK 0 1236 15 1640 122 9 4 chr10 104321636 104321866 -35994899 - AluSp SINE Alu -82 231 1 549 157 126 47 chr10 104321867 104321966 -35994799 - L1MC4 LINE L1 -867 7175 7085 369 62 0 0 chr10 104321966 104322014 -35994751 + (CA)n Simple_repeat Simple_repeat 1 48 0 549 157 126 47 chr10 104322014 104322105 -35994660 - L1MC4 LINE L1 -957 7085 6970 1027 217 45 111 chr10 104322108 104322147 -35994618 + L1MC4 LINE L1 7575 7615 -427 1730 167 41 24 chr10 104322147 104322440 -35994325 + AluJb SINE Alu 1 298 -14 1027 217 45 111 chr10 104322440 104322729 -35994036 + L1MC4 LINE L1 7615 7862 -180 198 71 0 0 chr10 104322729 104322757 -35994008 + (TG)n Simple_repeat Simple_repeat 1 28 0 1027 217 45 111 chr10 104322757 104322921 -35993844 + L1MC4 LINE L1 7862 8035 -7 2397 65 34 0 chr10 104322924 104323216 -35993549 - AluSp SINE Alu -11 302 1 1775 169 36 7 chr10 104324214 104324516 -35992249 - AluJo SINE Alu 0 312 2 496 178 225 16 chr10 104324579 104324708 -35992057 + MIR SINE MIR 5 160 -102 2300 108 0 6 chr10 104324832 104325146 -35991619 - AluSx SINE Alu 0 312 1 414 91 0 0 chr10 104325579 104325634 -35991131 - MER5A DNA MER1_type -10 179 125 1167 162 107 9 chr10 104325634 104325850 -35990915 + AluJb SINE Alu 1 237 -75 189 0 0 0 chr10 104325856 104325877 -35990888 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 467 188 73 10 chr10 104325896 104325992 -35990773 - MER5A DNA MER1_type -87 102 1 1906 162 16 3 chr10 104326312 104326620 -35990145 + AluJb SINE Alu 1 312 0 574 235 145 35 chr10 104326861 104327061 -35989704 - MIR SINE MIR -11 251 30 238 333 83 0 chr10 104327105 104327132 -35989633 + L3 LINE CR1 1305 1328 -249 1639 173 0 7 chr10 104327132 104327410 -35989355 + AluJb SINE Alu 25 300 -12 238 333 83 0 chr10 104327410 104327490 -35989275 + L3 LINE CR1 1328 1421 -156 335 279 92 56 chr10 104327936 104328069 -35988696 - MIR SINE MIR 0 262 135 2279 121 0 0 chr10 104328069 104328367 -35988398 - AluSq SINE Alu -15 298 1 335 279 92 56 chr10 104328367 104328484 -35988281 - MIR SINE MIR -127 135 3 403 237 49 145 chr10 104328779 104329011 -35987754 + L1MB8 LINE L1 5677 5884 -294 32 57 0 0 chr10 104329095 104329148 -35987617 + AT_rich Low_complexity Low_complexity 1 53 0 252 272 112 24 chr10 104329545 104329714 -35987051 + MLT1K LTR MaLR 403 586 -2 1721 161 3 21 chr10 104329784 104330108 -35986657 + AluJb SINE Alu 1 319 0 214 315 0 0 chr10 104330296 104330350 -35986415 + (CA)n Simple_repeat Simple_repeat 2 55 0 2047 109 6 65 chr10 104330441 104330763 -35986002 - AluSx SINE Alu -9 303 1 662 167 92 17 chr10 104333728 104333848 -35982917 - AluJo SINE Alu -176 136 8 1394 113 10 10 chr10 104334485 104334679 -35982086 + AluSx SINE Alu 1 194 -118 483 63 0 0 chr10 104334679 104334742 -35982023 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 1005 9 0 0 chr10 104334742 104334856 -35981909 + (GGGAA)n Simple_repeat Simple_repeat 2 115 0 228 67 0 0 chr10 104334910 104334940 -35981825 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 888 19 0 0 chr10 104334940 104335043 -35981722 - L1PA8 LINE L1 -24 6148 6046 * 1886 93 4 14 chr10 104335042 104335322 -35981443 - L1PA8 LINE L1 -51 6121 5845 22 0 0 0 chr10 104335358 104335380 -35981385 + AT_rich Low_complexity Low_complexity 1 22 0 391 301 122 58 chr10 104335834 104335905 -35980860 + L2 LINE L2 3107 3172 -100 2190 117 7 0 chr10 104335905 104336203 -35980562 - AluSp SINE Alu -13 300 1 391 301 122 58 chr10 104336203 104336287 -35980478 + L2 LINE L2 3172 3272 0 1554 157 70 60 chr10 104336414 104336537 -35980228 - Charlie1 DNA MER1_type 0 2761 2641 1857 157 0 7 chr10 104336537 104336854 -35979911 + AluJb SINE Alu 1 315 0 1554 157 70 60 chr10 104336854 104336990 -35979775 - Charlie1 DNA MER1_type -120 2641 2508 1945 169 7 0 chr10 104336990 104337292 -35979473 + AluJo SINE Alu 1 304 -8 1554 157 70 60 chr10 104337292 104337521 -35979244 - Charlie1 DNA MER1_type -253 2508 7 2261 113 10 7 chr10 104337531 104337840 -35978925 + AluSx SINE Alu 1 310 -2 207 260 180 20 chr10 104338087 104338187 -35978578 - MIR3 SINE MIR -85 123 8 2454 94 0 3 chr10 104338243 104338551 -35978214 - AluY SINE Alu -4 307 1 2121 125 3 10 chr10 104338564 104338867 -35977898 - AluSx SINE Alu 0 312 12 356 306 132 51 chr10 104338920 104339155 -35977610 - MIR SINE MIR 0 262 9 251 274 36 12 chr10 104339875 104339959 -35976806 + MIR SINE MIR 121 206 -56 248 340 42 38 chr10 104340358 104340646 -35976119 + L1MC/D LINE L1 5348 5636 -2172 1638 166 34 59 chr10 104340799 104340913 -35975852 + AluJo SINE Alu 1 116 -336 2247 96 0 7 chr10 104340913 104341222 -35975543 + AluSg SINE Alu 4 310 0 1638 166 34 59 chr10 104341222 104341566 -35975199 + AluJo SINE Alu 116 452 0 606 71 0 0 chr10 104341583 104341667 -35975098 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 1461 180 88 0 chr10 104341685 104341976 -35974789 + AluJb SINE Alu 1 314 0 1505 71 0 0 chr10 104341978 104342161 -35974604 + AluSq SINE Alu 10 192 -121 348 113 0 0 chr10 104342161 104342214 -35974551 + AluSq SINE Alu 241 293 -8 539 315 67 47 chr10 104342533 104342787 -35973978 + MIR SINE MIR 1 259 -3 975 163 34 34 chr10 104342962 104342991 -35973774 - L1MA6 LINE L1 -1 6299 6271 2337 99 0 0 chr10 104342991 104343293 -35973472 - AluSx SINE Alu -10 302 1 975 163 34 34 chr10 104343293 104343472 -35973293 - L1MA6 LINE L1 -28 6272 6091 2523 146 43 18 chr10 104343530 104343544 -35973221 - L1MC1 LINE L1 0 6333 6321 2204 116 0 0 chr10 104343544 104343852 -35972913 - AluSx SINE Alu 0 308 1 2523 146 43 18 chr10 104343852 104344281 -35972484 - L1MC1 LINE L1 -12 6321 5878 313 319 43 0 chr10 104344439 104344533 -35972232 - MIR SINE MIR -164 98 1 895 214 52 22 chr10 104344784 104345013 -35971752 - MER106A DNA MER1_type 0 236 1 656 258 115 32 chr10 104345521 104345738 -35971027 - MIR SINE MIR -26 236 2 581 316 47 27 chr10 104345900 104346236 -35970529 + L2 LINE L2 2717 3054 -218 313 338 0 0 chr10 104346256 104346336 -35970429 + L3 LINE CR1 1018 1097 -480 472 324 141 14 chr10 104346384 104346597 -35970168 - MIR SINE MIR -22 240 1 187 263 45 113 chr10 104346598 104346731 -35970034 + L3 LINE CR1 1160 1283 -294 349 278 96 81 chr10 104346860 104347069 -35969696 + L3 LINE CR1 1361 1572 -5 2162 78 20 34 chr10 104348312 104348605 -35968160 - AluSx SINE Alu -18 294 6 216 272 10 48 chr10 104350096 104350199 -35966566 + G-rich Low_complexity Low_complexity 5 103 0 1815 145 3 63 chr10 104351257 104351588 -35965177 + AluJb SINE Alu 1 311 -1 4217 170 30 8 chr10 104351588 104352375 -35964390 + L1MA6 LINE L1 5496 6300 0 1689 152 74 3 chr10 104352401 104352684 -35964081 + AluJb SINE Alu 1 303 -9 2411 94 0 0 chr10 104354795 104355092 -35961673 + AluSx SINE Alu 1 297 -15 250 290 110 44 chr10 104355105 104355309 -35961456 + MIR SINE MIR 47 256 -6 2301 61 41 7 chr10 104355601 104355896 -35960869 - AluY SINE Alu -6 305 1 2597 59 3 0 chr10 104356213 104356518 -35960247 + AluY SINE Alu 1 306 -5 1994 138 41 0 chr10 104356782 104357073 -35959692 - AluJb SINE Alu -9 303 1 2274 86 17 3 chr10 104357102 104357393 -35959372 + AluSp SINE Alu 3 297 -16 234 136 0 0 chr10 104357553 104357597 -35959168 + (A)n Simple_repeat Simple_repeat 1 44 0 490 175 48 0 chr10 104357756 104357859 -35958906 - L1MB7 LINE L1 -1 6183 6076 2383 82 3 0 chr10 104357864 104358158 -35958607 - AluSq SINE Alu -18 295 1 373 298 130 25 chr10 104358626 104358911 -35957854 - LTR16B LTR ERVL -14 450 136 30 0 0 0 chr10 104360560 104360590 -35956175 + AT_rich Low_complexity Low_complexity 1 30 0 2262 129 3 0 chr10 104361384 104361693 -35955072 + AluSg SINE Alu 1 310 0 2054 119 0 0 chr10 104362571 104362839 -35953926 + AluSx SINE Alu 10 277 -35 1449 116 0 52 chr10 104362839 104363071 -35953694 - AluSq SINE Alu -93 220 1 1975 176 12 24 chr10 104363084 104363498 -35953267 - L1MB8 LINE L1 0 6178 5770 1191 127 17 12 chr10 104363498 104363662 -35953103 - AluJo SINE Alu -25 287 120 1398 173 18 90 chr10 104363683 104364018 -35952747 - AluJo SINE Alu -1 311 1 242 209 0 146 chr10 104364033 104364143 -35952622 - AluJo SINE Alu -176 126 33 876 166 13 0 chr10 104364143 104364300 -35952465 - L1MB8 LINE L1 -400 5778 5620 1626 130 0 0 chr10 104364565 104364788 -35951977 - AluSg/x SINE Alu -14 296 74 2345 102 0 3 chr10 104364981 104365286 -35951479 + AluSx SINE Alu 1 304 -8 598 242 46 64 chr10 104365776 104365984 -35950781 + MIR SINE MIR 3 206 -56 222 214 124 56 chr10 104369474 104369563 -35947202 + L3b LINE CR1 1262 1356 -227 1630 178 0 7 chr10 104371366 104371641 -35945124 - AluJo SINE Alu -16 296 24 720 142 44 0 chr10 104372602 104372715 -35944050 + FRAM SINE Alu 40 157 -19 647 184 108 19 chr10 104372797 104372955 -35943810 - MIR SINE MIR 0 262 91 2421 78 7 0 chr10 104373027 104373322 -35943443 + AluY SINE Alu 3 299 -12 1130 172 50 18 chr10 104374641 104374862 -35941903 - AluJb SINE Alu -1 311 84 1901 150 13 7 chr10 104375812 104376119 -35940646 + AluJo SINE Alu 1 309 -3 974 101 8 0 chr10 104376752 104376881 -35939884 + AluSq/x SINE Alu 3 132 -181 212 188 0 21 chr10 104377191 104377239 -35939526 + CT-rich Low_complexity Low_complexity 2 48 0 668 138 9 18 chr10 104377369 104377478 -35939287 - FLAM_C SINE Alu 0 143 36 1862 140 7 14 chr10 104377736 104378022 -35938743 - AluJb SINE Alu -28 284 1 2653 10 0 3 chr10 104378048 104378336 -35938429 + AluYb8 SINE Alu 21 307 -11 1982 111 13 60 chr10 104378350 104378665 -35938100 + AluSx SINE Alu 6 305 -7 552 179 241 0 chr10 104380166 104380278 -35936487 + FLAM_C SINE Alu 2 140 -3 182 264 94 0 chr10 104380328 104380381 -35936384 - L2 LINE L2 0 3272 3215 632 223 78 68 chr10 104381475 104381681 -35935084 - MLT1L LTR MaLR -55 560 353 606 151 8 17 chr10 104384017 104384136 -35932629 + MIR SINE MIR 65 182 -80 1905 116 22 0 chr10 104384899 104385167 -35931598 - AluSq SINE Alu -39 274 1 1681 135 53 21 chr10 104385420 104385701 -35931064 - AluJo SINE Alu -22 290 1 2160 113 0 7 chr10 104386132 104386433 -35930332 - AluSx SINE Alu -13 299 1 1066 157 0 0 chr10 104386472 104386638 -35930127 - FRAM SINE Alu -3 173 8 4393 177 48 24 chr10 104387151 104388112 -35928653 + L1MB7 LINE L1 4150 5137 -1009 2213 112 10 0 chr10 104388112 104388416 -35928349 + AluSp SINE Alu 1 307 -6 4393 177 48 24 chr10 104388416 104388444 -35928321 + L1MB7 LINE L1 5137 5163 -983 813 130 65 8 chr10 104388444 104388567 -35928198 - AluJb SINE Alu -16 296 167 3694 167 52 44 chr10 104388572 104388762 -35928003 + L1MB7 LINE L1 5336 5523 -661 940 97 40 0 chr10 104388762 104388886 -35927879 - FLAM_C SINE Alu 0 133 5 3694 167 52 44 chr10 104388886 104389584 -35927181 + L1MB7 LINE L1 5523 6184 0 2244 118 0 0 chr10 104389699 104389996 -35926769 - AluSx SINE Alu -15 297 1 294 243 155 10 chr10 104390273 104390376 -35926389 - MIR SINE MIR -26 236 119 288 0 0 0 chr10 104391419 104391451 -35925314 + (GA)n Simple_repeat Simple_repeat 1 32 0 891 106 0 8 chr10 104391500 104391623 -35925142 - FLAM_C SINE Alu -21 122 1 2009 113 0 70 chr10 104391633 104391961 -35924804 - AluSq SINE Alu -8 305 1 3133 192 26 3 chr10 104391962 104392565 -35924200 - L1MB5 LINE L1 -34 6140 5524 681 330 92 46 chr10 104393838 104394440 -35922325 - L2 LINE L2 -531 2783 2210 2057 132 0 22 chr10 104394440 104394751 -35922014 + AluJb SINE Alu 1 304 -8 681 330 92 46 chr10 104394751 104394794 -35921971 - L2 LINE L2 -1104 2210 2170 2113 118 30 3 chr10 104394794 104395091 -35921674 + AluSx SINE Alu 1 305 -7 681 330 92 46 chr10 104395091 104395208 -35921557 - L2 LINE L2 -1144 2170 1985 271 269 77 10 chr10 104395233 104395337 -35921428 + L1ME LINE L1 5751 5861 -260 336 122 27 4 chr10 104395381 104395446 -35921319 + FLAM_A SINE Alu 2 51 -82 535 115 327 24 chr10 104395593 104395758 -35921007 - Charlie1a DNA MER1_type -1 1454 1240 554 191 0 9 chr10 104395938 104396043 -35920722 + FLAM_A SINE Alu 32 135 -7 428 135 0 14 chr10 104396045 104396119 -35920646 - Charlie1a DNA MER1_type -218 1237 1165 * 3353 190 52 29 chr10 104396112 104396829 -35919936 - Charlie1a DNA MER1_type -722 733 1 247 270 182 41 chr10 104397151 104397299 -35919466 - MIR3 SINE MIR -50 158 20 2304 110 0 0 chr10 104397493 104397792 -35918973 - AluSx SINE Alu -13 299 1 209 269 0 82 chr10 104397820 104397954 -35918811 + CT-rich Low_complexity Low_complexity 1 123 0 736 224 0 0 chr10 104399499 104399633 -35917132 + MER94 DNA DNA 1 134 0 237 229 133 67 chr10 104399671 104399736 -35917029 - MIR SINE MIR -64 198 122 1905 168 7 0 chr10 104399736 104400039 -35916726 + AluJo SINE Alu 1 305 -7 237 229 133 67 chr10 104400039 104400078 -35916687 - MIR SINE MIR -140 122 87 2237 220 33 4 chr10 104400404 104400858 -35915907 + MLT1C LTR MaLR 1 467 0 21 0 0 0 chr10 104400871 104400892 -35915873 + AT_rich Low_complexity Low_complexity 1 21 0 1813 151 32 7 chr10 104400936 104401220 -35915545 - AluJb SINE Alu -21 291 1 206 159 29 29 chr10 104401570 104401639 -35915126 + A-rich Low_complexity Low_complexity 3 71 0 1749 185 64 9 chr10 104402014 104402360 -35914405 - MLT1A1 LTR MaLR 0 365 1 249 324 76 9 chr10 104403514 104403619 -35913146 - L2 LINE L2 -1 3271 3160 2329 113 0 0 chr10 104403808 104404119 -35912646 + AluSq SINE Alu 1 311 -2 1515 135 46 35 chr10 104404119 104404401 -35912364 + L1MC3 LINE L1 7390 7674 -111 24 32 0 0 chr10 104404403 104404434 -35912331 + AT_rich Low_complexity Low_complexity 1 31 0 666 146 10 0 chr10 104404434 104404537 -35912228 - AluSg/x SINE Alu -5 305 202 533 197 41 33 chr10 104404537 104404659 -35912106 + L1MC2 LINE L1 6212 6334 -10 818 201 46 11 chr10 104404674 104404848 -35911917 + L1ME2 LINE L1 5985 6164 0 1028 238 92 25 chr10 104405729 104406044 -35910721 + L1MB7 LINE L1 5783 6118 -66 1882 157 3 3 chr10 104406275 104406568 -35910197 - AluJb SINE Alu -19 293 1 5098 86 12 18 chr10 104406590 104406682 -35910083 + PABL_A LTR ERV1 1 92 -568 1771 126 72 7 chr10 104406682 104406959 -35909806 + AluSx SINE Alu 1 295 -17 5098 86 12 18 chr10 104406959 104407530 -35909235 + PABL_A LTR ERV1 92 660 0 2669 3 0 0 chr10 104408227 104408549 -35908216 - AluYa5 SINE Alu 0 322 1 395 235 93 68 chr10 104408648 104408810 -35907955 - MIR SINE MIR -79 183 18 233 228 73 88 chr10 104409286 104409422 -35907343 - L1MC5 LINE L1 -54 7907 7774 566 143 76 8 chr10 104409461 104409580 -35907185 - L1MA9 LINE L1 -25 6287 6161 4407 153 11 28 chr10 104409610 104410042 -35906723 - L1MA9 LINE L1 -282 6030 5592 2024 145 0 7 chr10 104410042 104410345 -35906420 - AluSx SINE Alu -11 301 1 4407 153 11 28 chr10 104410345 104410809 -35905956 - L1MA9 LINE L1 -720 5592 5150 2167 124 16 3 chr10 104410885 104411191 -35905574 + AluSx SINE Alu 1 310 -2 943 113 53 0 chr10 104411207 104411358 -35905407 + L1MA5A LINE L1 6136 6294 -3 1890 161 0 20 chr10 104411361 104411666 -35905099 + AluSx SINE Alu 1 299 -13 2177 121 0 0 chr10 104411684 104411981 -35904784 - AluSx SINE Alu -12 300 4 239 277 92 34 chr10 104412994 104413113 -35903652 - L2 LINE L2 -815 2499 2374 1793 125 0 0 chr10 104413115 104413355 -35903410 + AluSq SINE Alu 1 240 -73 189 0 0 0 chr10 104413377 104413398 -35903367 + (A)n Simple_repeat Simple_repeat 1 21 0 234 346 69 45 chr10 104413398 104413687 -35903078 - L2 LINE L2 -927 2387 2092 21 0 0 0 chr10 104413688 104413709 -35903056 + AT_rich Low_complexity Low_complexity 1 21 0 1418 195 16 0 chr10 104414584 104414835 -35901930 + AluJo SINE Alu 1 255 -57 202 218 0 36 chr10 104414962 104415017 -35901748 - L2 LINE L2 -2 3270 3218 192 217 203 0 chr10 104415235 104415304 -35901461 - L2 LINE L2 -310 2962 2880 2075 129 10 0 chr10 104415758 104416053 -35900712 + AluSx SINE Alu 1 298 -14 730 178 201 11 chr10 104416621 104416795 -35899970 - MER3 DNA MER1_type 0 209 3 27 65 0 0 chr10 104417355 104417386 -35899379 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 104417421 104417450 -35899315 + AT_rich Low_complexity Low_complexity 1 29 0 541 330 71 4 chr10 104417708 104417947 -35898818 + MIR SINE MIR 6 260 -2 183 129 0 0 chr10 104418613 104418644 -35898121 + (A)n Simple_repeat Simple_repeat 1 31 0 2206 126 0 0 chr10 104419420 104419721 -35897044 + AluSx SINE Alu 1 301 -11 1985 152 0 0 chr10 104419906 104420203 -35896562 - AluSg SINE Alu -13 297 1 973 200 44 0 chr10 104420851 104421031 -35895734 - MER58A DNA MER1_type 0 224 37 25 83 0 0 chr10 104421357 104421417 -35895348 + AT_rich Low_complexity Low_complexity 1 60 0 537 246 96 12 chr10 104421459 104421626 -35895139 - MIR SINE MIR -26 236 56 1400 128 5 0 chr10 104421646 104421841 -35894924 + AluJo SINE Alu 23 218 -94 282 125 0 36 chr10 104421841 104421897 -35894868 + FAM SINE Alu 125 178 -1 252 344 22 44 chr10 104421908 104421998 -35894767 + MER5A DNA MER1_type 88 186 -3 303 307 223 12 chr10 104422009 104422175 -35894590 + MIR SINE MIR 23 223 -39 2092 201 116 48 chr10 104422175 104422354 -35894411 + MLT1F1 LTR MaLR 1 166 -401 225 0 0 0 chr10 104422354 104422379 -35894386 + (TC)n Simple_repeat Simple_repeat 1 25 0 2092 201 116 48 chr10 104422379 104422701 -35894064 + MLT1F1 LTR MaLR 166 536 -31 199 0 65 0 chr10 104422701 104422732 -35894033 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 1990 102 0 0 chr10 104422740 104423004 -35893761 - AluSq SINE Alu -49 264 1 3611 164 10 22 chr10 104423036 104423121 -35893644 - L1MB3 LINE L1 -1 6182 6097 1848 159 3 3 chr10 104423121 104423416 -35893349 - AluJb SINE Alu -17 295 1 3611 164 10 22 chr10 104423416 104424001 -35892764 - L1MB3 LINE L1 -86 6097 5520 655 134 76 0 chr10 104425550 104425669 -35891096 + L1MB3 LINE L1 6056 6183 0 285 242 73 57 chr10 104426348 104426472 -35890293 - MIR SINE MIR -18 244 119 1978 112 7 7 chr10 104426638 104426942 -35889823 + AluSx SINE Alu 1 304 -8 321 68 0 0 chr10 104427259 104427303 -35889462 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 27 0 0 chr10 104427756 104427793 -35888972 + GC_rich Low_complexity Low_complexity 1 37 0 1826 138 24 0 chr10 104428140 104428431 -35888334 - AluJb SINE Alu -13 299 2 2025 89 25 0 chr10 104429480 104429762 -35887003 - AluSp SINE Alu -24 289 1 2606 125 71 2 chr10 104429774 104430181 -35886584 + LTR35 LTR ERV1 184 618 0 305 259 104 7 chr10 104430181 104430316 -35886449 - L1ME LINE L1 -480 5641 5494 1832 150 14 7 chr10 104431208 104431502 -35885263 - AluSx SINE Alu -16 296 1 181 0 33 33 chr10 104431713 104431743 -35885022 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1930 101 0 0 chr10 104431902 104432160 -35884605 - AluSx SINE Alu -47 265 8 314 23 0 0 chr10 104433042 104433086 -35883679 + L1PA3 LINE L1 6112 6155 0 180 0 0 0 chr10 104433606 104433626 -35883139 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 324 268 0 12 chr10 104433655 104433737 -35883028 - AluSg/x SINE Alu -11 289 209 483 202 58 0 chr10 104433973 104434077 -35882688 - L1MA6 LINE L1 -100 6200 6091 2510 146 43 18 chr10 104434133 104434147 -35882618 - L1MC1 LINE L1 0 6333 6321 2065 116 0 0 chr10 104434147 104434455 -35882310 - AluSx SINE Alu 0 308 1 2510 146 43 18 chr10 104434455 104434884 -35881881 - L1MC1 LINE L1 -12 6321 5878 315 319 43 0 chr10 104435042 104435136 -35881629 - MIR SINE MIR -164 98 1 947 214 52 22 chr10 104435387 104435616 -35881149 - MER106A DNA MER1_type 0 236 1 652 258 115 32 chr10 104436124 104436341 -35880424 - MIR SINE MIR -26 236 2 572 316 47 27 chr10 104436503 104436839 -35879926 + L2 LINE L2 2717 3054 -218 312 338 0 0 chr10 104436859 104436939 -35879826 + L3 LINE CR1 1018 1097 -480 471 324 141 14 chr10 104436987 104437200 -35879565 - MIR SINE MIR -22 240 1 315 263 105 91 chr10 104437463 104437672 -35879093 + L3 LINE CR1 1361 1572 -5 2021 78 20 34 chr10 104438915 104439208 -35877557 - AluSx SINE Alu -18 294 6 216 272 10 48 chr10 104440699 104440802 -35875963 + G-rich Low_complexity Low_complexity 5 103 0 1669 139 3 65 chr10 104441860 104442183 -35874582 + AluJb SINE Alu 1 303 -9 4276 169 30 8 chr10 104442183 104442978 -35873787 + L1MA6 LINE L1 5488 6300 0 1859 95 77 0 chr10 104443004 104443289 -35873476 + AluSg1 SINE Alu 1 307 -2 1633 160 57 16 chr10 104444939 104445000 -35871765 - L1 LINE L1 -1534 4612 4555 1797 71 4 30 chr10 104445000 104445268 -35871497 - AluY SINE Alu -1 310 50 1633 160 57 16 chr10 104445268 104445574 -35871191 - L1 LINE L1 -1591 4555 4230 1581 151 3 48 chr10 104445817 104446128 -35870637 - AluJo SINE Alu -15 297 1 456 268 74 59 chr10 104446260 104446570 -35870195 + L1MC4 LINE L1 7545 7864 -178 1851 66 111 7 chr10 104446570 104446841 -35869924 - AluSc SINE Alu -10 299 1 456 268 74 59 chr10 104446841 104446951 -35869814 + L1MC4 LINE L1 7864 7971 -71 1624 101 159 8 chr10 104446970 104447228 -35869537 - AluSq SINE Alu -5 298 2 364 306 132 51 chr10 104447271 104447506 -35869259 - MIR SINE MIR 0 262 9 254 274 36 12 chr10 104448225 104448309 -35868456 + MIR SINE MIR 121 206 -56 299 320 78 50 chr10 104448704 104449088 -35867677 + L1MC4 LINE L1 5347 5741 -380 1581 153 6 77 chr10 104449149 104449263 -35867502 + AluJo SINE Alu 1 121 -191 2108 96 0 7 chr10 104449263 104449572 -35867193 + AluSg SINE Alu 4 310 0 1581 153 6 77 chr10 104449572 104449783 -35866982 + AluJo SINE Alu 121 304 -8 1836 128 32 3 chr10 104449826 104450108 -35866657 + AluSx SINE Alu 1 290 -22 479 245 60 66 chr10 104450261 104450424 -35866341 + L1MC4 LINE L1 5751 5857 -264 2006 124 3 0 chr10 104450424 104450715 -35866050 + AluSg SINE Alu 2 293 -17 479 245 60 66 chr10 104450715 104450823 -35865942 + L1MC4 LINE L1 5857 5964 -157 304 298 105 0 chr10 104450721 104450835 -35865930 - L1MC3 LINE L1 -1139 6646 6521 * 367 242 8 77 chr10 104450846 104450875 -35865890 + L1ME2 LINE L1 6004 6033 -130 1712 133 0 53 chr10 104450875 104451175 -35865590 + AluSx SINE Alu 11 294 -18 367 242 8 77 chr10 104451175 104451267 -35865498 + L1ME2 LINE L1 6033 6102 -61 2024 199 61 25 chr10 104451285 104451728 -35865037 + LTR2B LTR ERV1 32 490 0 2289 99 0 0 chr10 104451751 104452063 -35864702 - AluSx SINE Alu 0 312 1 266 277 170 9 chr10 104452066 104452178 -35864587 + MIR SINE MIR 116 245 -17 402 296 158 53 chr10 104452325 104452368 -35864397 + L3 LINE CR1 1180 1217 -360 1664 181 7 7 chr10 104452368 104452661 -35864104 + AluJo SINE Alu 3 295 -17 402 296 158 53 chr10 104452661 104452972 -35863793 + L3 LINE CR1 1217 1571 -6 2077 93 7 0 chr10 104453233 104453538 -35863227 - AluSc SINE Alu 0 307 1 276 309 0 32 chr10 104453598 104453692 -35863073 + MIR SINE MIR 16 106 -102 2278 222 78 23 chr10 104453695 104453943 -35862822 + Charlie1a DNA MER1_type 1 234 -2527 1823 89 53 0 chr10 104453943 104454190 -35862575 - AluSq SINE Alu -53 260 1 2278 222 78 23 chr10 104454190 104454540 -35862225 + Charlie1a DNA MER1_type 234 632 -823 1408 148 133 7 chr10 104454542 104454812 -35861953 + AluJb SINE Alu 9 312 0 1705 169 9 34 chr10 104454816 104455070 -35861695 + Charlie1a DNA MER1_type 627 871 -1890 1671 179 0 19 chr10 104455070 104455383 -35861382 + AluJo SINE Alu 1 307 -5 1705 169 9 34 chr10 104455383 104455478 -35861287 + Charlie1a DNA MER1_type 871 967 -488 1281 179 192 26 chr10 104455479 104455865 -35860900 + LTR7 LTR ERV1 1 450 0 1921 198 49 27 chr10 104455865 104456314 -35860451 + HERVH LTR ERV1 1 459 -7254 3711 139 12 31 chr10 104456383 104457031 -35859734 + HERVH LTR ERV1 793 1428 -6285 9193 123 7 32 chr10 104458113 104459565 -35857200 + HERVH LTR ERV1 1416 2830 -4883 6531 124 6 11 chr10 104459565 104459967 -35856798 + HERVH LTR ERV1 3357 3759 -3954 2044 111 3 3 chr10 104459967 104460255 -35856510 - AluSx SINE Alu -24 288 1 6531 124 6 11 chr10 104460255 104461481 -35855284 + HERVH LTR ERV1 3759 4910 -2803 1382 150 29 44 chr10 104461481 104461701 -35855064 + HERVH LTR ERV1 5747 5964 -1749 2279 85 0 0 chr10 104461701 104461995 -35854770 - AluY SINE Alu -17 294 1 1382 150 29 44 chr10 104461995 104462048 -35854717 + HERVH LTR ERV1 5964 6016 -1697 * 3726 107 7 16 chr10 104462041 104462602 -35854163 + HERVH LTR ERV1 7157 7712 -1 823 116 70 8 chr10 104462603 104462732 -35854033 + LTR7 LTR ERV1 1 137 -313 886 137 0 26 chr10 104462805 104462958 -35853807 + LTR7 LTR ERV1 302 450 0 * 1377 107 136 48 chr10 104462958 104463029 -35853736 + Charlie1a DNA MER1_type 964 1027 -1734 1811 159 3 0 chr10 104463029 104463319 -35853446 + AluJb SINE Alu 9 299 -13 1377 107 136 48 chr10 104463319 104463552 -35853213 + Charlie1a DNA MER1_type 1027 1295 -160 1705 165 10 13 chr10 104463553 104463856 -35852909 - AluJb SINE Alu -5 307 6 949 188 28 0 chr10 104463860 104464073 -35852692 - L1M4 LINE L1 -958 5188 4970 273 159 48 16 chr10 104464073 104464136 -35852629 + Charlie1a DNA MER1_type 1391 1455 0 296 277 36 78 chr10 104464138 104464183 -35852582 + MIR SINE MIR 104 149 -113 2063 136 0 0 chr10 104464183 104464491 -35852274 + AluSx SINE Alu 1 308 -4 296 277 36 78 chr10 104464491 104464611 -35852154 + MIR SINE MIR 149 262 0 217 239 90 0 chr10 104464659 104464726 -35852039 + L2 LINE L2 3188 3260 -12 234 0 0 0 chr10 104464847 104464873 -35851892 + (TAAAAA)n Simple_repeat Simple_repeat 5 30 0 903 272 70 48 chr10 104464880 104465010 -35851755 - L3 LINE CR1 -638 939 813 2042 106 0 0 chr10 104465010 104465292 -35851473 + AluY SINE Alu 1 282 -29 350 21 21 0 chr10 104465292 104465339 -35851426 + (TA)n Simple_repeat Simple_repeat 2 49 0 903 272 70 48 chr10 104465339 104465523 -35851242 - L3 LINE CR1 -763 814 617 2051 195 59 129 chr10 104466323 104466763 -35850002 - HAL1 LINE L1 0 2507 2156 1839 113 13 48 chr10 104466763 104467074 -35849691 + AluSg1 SINE Alu 1 300 -9 2051 195 59 129 chr10 104467074 104467501 -35849264 - HAL1 LINE L1 -351 2156 1701 1752 146 17 17 chr10 104467502 104467804 -35848961 - AluSx SINE Alu -10 302 1 1307 228 111 169 chr10 104467844 104468159 -35848606 - HAL1 LINE L1 -1063 1444 1112 2388 70 3 6 chr10 104468159 104468472 -35848293 - AluSq SINE Alu -1 312 1 1307 228 111 169 chr10 104468472 104468586 -35848179 - HAL1 LINE L1 -1395 1112 993 189 0 0 0 chr10 104468586 104468607 -35848158 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 665 180 0 47 chr10 104468607 104468729 -35848036 - FLAM_C SINE Alu -26 117 2 1307 228 111 169 chr10 104468729 104469020 -35847745 - HAL1 LINE L1 -1513 994 688 1713 147 3 46 chr10 104469020 104469206 -35847559 - AluSx SINE Alu 0 312 120 207 0 0 0 chr10 104469206 104469229 -35847536 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2121 80 14 0 chr10 104469229 104469505 -35847260 - AluSc SINE Alu -29 280 1 1713 147 3 46 chr10 104469505 104469643 -35847122 - AluSx SINE Alu -190 122 1 1307 228 111 169 chr10 104469643 104469821 -35846944 - HAL1 LINE L1 -1819 688 501 264 130 93 0 chr10 104469821 104469875 -35846890 + LTR41 LTR ERVL 717 794 -1 1307 228 111 169 chr10 104469875 104470327 -35846438 - HAL1 LINE L1 -2006 501 4 341 282 41 47 chr10 104470344 104470514 -35846251 - L2 LINE L2 -4 3309 3141 1801 135 10 30 chr10 104470524 104470820 -35845945 - AluSx SINE Alu -22 290 1 2126 116 3 0 chr10 104470859 104471160 -35845605 - AluSx SINE Alu -9 303 2 2125 136 3 0 chr10 104471271 104471581 -35845184 - L1PA16 LINE L1 -33 6133 5823 2241 111 0 0 chr10 104471581 104471888 -35844877 - AluSx SINE Alu -5 307 1 1959 120 3 10 chr10 104472571 104472871 -35843894 - AluSq SINE Alu -15 298 1 1907 127 67 0 chr10 104473114 104473397 -35843368 - AluSq SINE Alu -9 304 3 201 293 54 54 chr10 104473525 104473672 -35843093 - L2 LINE L2 0 3313 3167 2347 116 3 36 chr10 104473676 104473700 -35843065 + L1PA16 LINE L1 5807 5830 -336 1888 166 0 13 chr10 104473700 104474002 -35842763 + AluJo SINE Alu 1 298 -14 2154 134 0 3 chr10 104474005 104474310 -35842455 + AluSx SINE Alu 1 304 -8 2347 116 3 36 chr10 104474310 104474644 -35842121 + L1PA16 LINE L1 5832 6157 -9 1537 184 0 70 chr10 104474645 104475042 -35841723 + L1 LINE L1 4282 4650 -1496 1186 86 0 63 chr10 104475043 104475217 -35841548 + AluSg/x SINE Alu 143 305 -7 833 179 51 0 chr10 104475220 104475404 -35841361 + FRAM SINE Alu 1 56 0 1484 159 104 11 chr10 104475501 104475771 -35840994 - AluJb SINE Alu -17 295 1 2036 136 3 10 chr10 104475781 104476089 -35840676 - AluSx SINE Alu -6 306 1 1329 102 0 6 chr10 104476100 104476277 -35840488 - AluSq SINE Alu -13 300 125 192 77 0 0 chr10 104476284 104476310 -35840455 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 2287 53 67 30 chr10 104476317 104476616 -35840149 - AluY SINE Alu -1 310 1 203 261 106 67 chr10 104476616 104476796 -35839969 - L2 LINE L2 -10 3303 3117 696 269 196 14 chr10 104476801 104477239 -35839526 + L2 LINE L2 2454 2971 -343 298 259 106 0 chr10 104477396 104477481 -35839284 + L2 LINE L2 3202 3295 -18 1657 167 21 18 chr10 104477481 104477790 -35838975 - AluJo SINE Alu 0 310 1 594 107 45 0 chr10 104477798 104477910 -35838855 + CT-rich Low_complexity Low_complexity 2 118 0 703 167 9 0 chr10 104478034 104478148 -35838617 - FLAM_C SINE Alu -18 115 1 2023 123 35 3 chr10 104478166 104478450 -35838315 - AluSx SINE Alu -19 293 1 581 188 8 17 chr10 104478509 104478650 -35838115 - FLAM_A SINE Alu 0 140 1 736 160 0 8 chr10 104478848 104478967 -35837798 - AluJb SINE Alu -192 120 3 1853 145 47 10 chr10 104478970 104479421 -35837344 - AluJb SINE Alu 0 466 5 21 0 0 0 chr10 104479620 104479641 -35837124 + AT_rich Low_complexity Low_complexity 1 21 0 2304 103 0 7 chr10 104479647 104479948 -35836817 + AluSp SINE Alu 2 300 -13 317 308 29 0 chr10 104480063 104480167 -35836598 + CT-rich Low_complexity Low_complexity 3 109 0 1486 219 241 6 chr10 104480375 104480868 -35835897 + L1MC4 LINE L1 7244 7852 -190 2066 119 0 14 chr10 104481071 104481356 -35835409 + AluSx SINE Alu 1 281 -31 213 39 0 0 chr10 104481356 104481382 -35835383 + (CA)n Simple_repeat Simple_repeat 1 26 0 1641 258 46 35 chr10 104481387 104481844 -35834921 + MER115 DNA AcHobo 171 632 -61 2159 115 3 3 chr10 104481986 104482290 -35834475 - AluSx SINE Alu -8 304 1 2296 103 0 3 chr10 104482591 104482893 -35833872 - AluSx SINE Alu -10 302 2 242 273 0 0 chr10 104482973 104483028 -35833737 + CT-rich Low_complexity Low_complexity 3 57 0 2212 102 3 7 chr10 104483180 104483475 -35833290 + AluSc SINE Alu 1 294 -15 751 186 0 0 chr10 104483476 104483605 -35833160 - AluJo/FLAM SINE Alu -173 129 1 1486 100 39 39 chr10 104483626 104483885 -35832880 - AluSx SINE Alu 0 312 63 2138 108 14 0 chr10 104484535 104484821 -35831944 + AluSx SINE Alu 1 290 -22 198 0 0 0 chr10 104484984 104485006 -35831759 + (TTA)n Simple_repeat Simple_repeat 3 24 0 44702 43 1 4 chr10 104485006 104491160 -35825605 - L1PA4 LINE L1 -18 6137 1 2410 99 0 0 chr10 104491160 104491464 -35825301 - AluSq SINE Alu -9 304 1 2217 124 0 0 chr10 104492050 104492349 -35824416 + AluSx SINE Alu 1 299 -13 2212 128 0 7 chr10 104492727 104493031 -35823734 + AluSx SINE Alu 1 302 -10 1332 156 53 86 chr10 104493397 104493699 -35823066 + AluJo SINE Alu 1 292 -20 225 139 0 0 chr10 104493969 104494012 -35822753 + (TG)n Simple_repeat Simple_repeat 2 44 0 2054 121 0 4 chr10 104494012 104494293 -35822472 - AluSx SINE Alu -32 280 1 2142 124 7 0 chr10 104494582 104494880 -35821885 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 104494891 104494914 -35821851 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1802 173 0 3 chr10 104494917 104495200 -35821565 - AluJo SINE Alu -30 282 1 281 320 90 8 chr10 104495596 104495718 -35821047 + L2 LINE L2 3168 3299 -14 672 260 101 18 chr10 104495837 104496138 -35820627 + L1M3 LINE L1 5483 5802 -378 2174 86 0 0 chr10 104496180 104496449 -35820316 - AluSx SINE Alu -7 305 37 879 109 8 16 chr10 104496686 104496814 -35819951 - FLAM_C SINE Alu -16 127 1 180 256 0 0 chr10 104496948 104496987 -35819778 - L2 LINE L2 -96 3176 3138 2194 111 3 25 chr10 104497112 104497428 -35819337 + AluSq SINE Alu 1 309 -4 201 39 0 0 chr10 104497685 104497711 -35819054 + (GA)n Simple_repeat Simple_repeat 1 26 0 350 326 6 55 chr10 104498517 104498698 -35818067 - MER5A DNA MER1_type 0 189 7 2360 93 3 7 chr10 104498758 104499068 -35817697 - AluSx SINE Alu -3 309 1 762 183 0 0 chr10 104499218 104499338 -35817427 + FLAM_C SINE Alu 2 121 -12 27 0 0 0 chr10 104499338 104499365 -35817400 + AT_rich Low_complexity Low_complexity 1 27 0 2028 112 3 7 chr10 104499367 104499699 -35817066 - AluSp SINE Alu 0 331 1 2420 97 3 0 chr10 104499955 104500263 -35816502 - AluSx SINE Alu -3 309 1 2251 104 26 10 chr10 104501381 104501689 -35815076 + AluSq SINE Alu 1 313 0 1667 169 3 52 chr10 104501715 104501864 -35814901 + AluJo SINE Alu 1 127 -185 375 23 0 0 chr10 104501864 104501908 -35814857 + (TA)n Simple_repeat Simple_repeat 2 45 0 1667 169 3 52 chr10 104501908 104502083 -35814682 + AluJo SINE Alu 127 309 -3 1646 106 5 0 chr10 104502265 104502482 -35814283 - AluSx SINE Alu -94 218 1 2137 130 7 0 chr10 104502485 104502778 -35813987 - AluSx SINE Alu -17 295 1 483 154 0 0 chr10 104502962 104503040 -35813725 - MER69 DNA AcHobo -2 2524 2447 377 213 98 16 chr10 104503383 104503505 -35813260 + L2 LINE L2 3180 3311 -2 700 125 52 73 chr10 104503618 104503754 -35813011 - FLAM_C SINE Alu 0 133 1 2148 117 0 0 chr10 104503773 104504046 -35812719 - AluSx SINE Alu -39 273 1 313 260 30 10 chr10 104504114 104504214 -35812551 + L1ME LINE L1 5121 5222 -924 570 186 0 16 chr10 104504317 104504446 -35812319 + L1ME LINE L1 5238 5364 -782 306 108 0 32 chr10 104504457 104504520 -35812245 + Alu SINE Alu 3 48 -254 1514 72 0 38 chr10 104504577 104504786 -35811979 + AluY SINE Alu 100 300 -11 753 197 96 132 chr10 104504786 104504941 -35811824 + L1ME LINE L1 5356 5515 -651 357 169 15 0 chr10 104504941 104505006 -35811759 - FLAM SINE Alu 0 133 68 1919 147 13 10 chr10 104505011 104505318 -35811447 + AluSx SINE Alu 5 312 0 753 197 96 132 chr10 104505318 104505472 -35811293 + L1ME LINE L1 5519 5714 -452 23 0 0 0 chr10 104505476 104505499 -35811266 + AT_rich Low_complexity Low_complexity 1 23 0 1862 131 8 0 chr10 104505515 104505800 -35810965 + AluSx SINE Alu 23 309 0 208 188 0 21 chr10 104505818 104505866 -35810899 + L2 LINE L2 2598 2644 -670 678 165 0 8 chr10 104505866 104505987 -35810778 - AluSg/x SINE Alu -16 294 175 5060 152 68 23 chr10 104506106 104507711 -35809054 + L1PA16 LINE L1 4413 6165 -1 24 0 0 0 chr10 104507714 104507738 -35809027 + AT_rich Low_complexity Low_complexity 1 24 0 1826 177 3 6 chr10 104507738 104508049 -35808716 + AluJo SINE Alu 2 311 -1 619 136 0 0 chr10 104508197 104508285 -35808480 - FLAM SINE Alu -17 126 39 33 0 0 0 chr10 104508290 104508323 -35808442 + AT_rich Low_complexity Low_complexity 1 33 0 2259 112 0 34 chr10 104508448 104508771 -35807994 - AluSx SINE Alu 0 312 1 2394 80 10 0 chr10 104509012 104509311 -35807454 - AluSg SINE Alu -8 302 1 600 221 8 0 chr10 104509695 104509822 -35806943 - L2 LINE L2 0 3313 3186 1728 183 0 3 chr10 104510736 104511046 -35805719 + AluJo SINE Alu 1 309 0 1579 127 13 0 chr10 104511348 104511621 -35805144 - AluSg SINE Alu 0 328 53 1458 132 5 5 chr10 104511621 104511833 -35804932 - AluSq SINE Alu -71 242 30 658 150 0 0 chr10 104512053 104512166 -35804599 - AluSq/x SINE Alu -199 114 2 792 307 68 23 chr10 104512166 104512327 -35804438 + L2 LINE L2 2637 2789 -524 2046 106 14 18 chr10 104512327 104512460 -35804305 + AluSx SINE Alu 1 133 -177 2279 92 7 13 chr10 104512460 104512763 -35804002 + AluSg SINE Alu 1 301 -9 2046 106 14 18 chr10 104512763 104512940 -35803825 + AluSx SINE Alu 133 310 0 792 307 68 23 chr10 104512940 104513414 -35803351 + L2 LINE L2 2789 3313 0 281 299 43 68 chr10 104513414 104513621 -35803144 - L3b LINE CR1 -77 1506 1305 1176 132 0 0 chr10 104513882 104514049 -35802716 + AluSg/x SINE Alu 135 301 -9 2181 123 3 0 chr10 104514312 104514605 -35802160 - AluSx SINE Alu -18 294 1 1829 138 7 36 chr10 104514654 104514958 -35801807 + AluJb SINE Alu 1 295 -17 643 278 39 5 chr10 104515067 104515272 -35801493 + MIR SINE MIR 1 212 -50 1563 90 0 5 chr10 104515327 104515528 -35801237 - AluSp SINE Alu -7 306 107 1124 303 67 9 chr10 104515528 104516095 -35800670 + L1M4 LINE L1 3348 3947 -2199 32 0 0 0 chr10 104516095 104516127 -35800638 + AT_rich Low_complexity Low_complexity 1 32 0 2347 92 0 10 chr10 104516127 104516432 -35800333 - AluSc SINE Alu -7 302 1 553 192 20 0 chr10 104516432 104516531 -35800234 - AluJo SINE Alu -177 135 35 391 261 98 50 chr10 104516532 104516613 -35800152 + L1M4 LINE L1 3942 4018 -2128 2445 203 62 15 chr10 104516613 104517131 -35799634 - MLT1F LTR MaLR 0 542 1 391 261 98 50 chr10 104517131 104517395 -35799370 + L1M4 LINE L1 4018 4321 -1825 895 157 7 0 chr10 104517444 104517591 -35799174 - L1PB4 LINE L1 -151 6005 5858 341 278 80 7 chr10 104517592 104517743 -35799022 + L1M4 LINE L1 4027 4188 -1958 1704 183 7 0 chr10 104518429 104518713 -35798052 - AluJb SINE Alu -26 286 1 1043 147 18 52 chr10 104518758 104518946 -35797819 + MLT1C LTR MaLR 1 180 -210 2061 130 10 0 chr10 104518946 104519245 -35797520 + AluJo SINE Alu 1 302 -10 1043 147 18 52 chr10 104519245 104519293 -35797472 + MLT1C LTR MaLR 180 228 -162 1302 199 165 67 chr10 104519299 104519596 -35797169 + MLT1C LTR MaLR 180 467 0 2162 116 0 34 chr10 104519752 104520072 -35796693 - AluSx SINE Alu -3 309 1 748 275 69 36 chr10 104520629 104520944 -35795821 - L1ME LINE L1 -395 5726 5390 2078 125 0 7 chr10 104520944 104521241 -35795524 - AluSx SINE Alu -17 295 1 748 275 69 36 chr10 104521241 104521372 -35795393 - L1ME LINE L1 -731 5390 5265 1768 112 126 0 chr10 104521385 104521654 -35795111 - AluSg SINE Alu -7 303 1 255 335 84 58 chr10 104521931 104522213 -35794552 + L2 LINE L2 2563 2836 -436 2459 79 0 7 chr10 104522213 104522518 -35794247 - AluSx SINE Alu -9 303 1 255 335 84 58 chr10 104522518 104522925 -35793840 + L2 LINE L2 2836 3268 -4 2216 114 10 0 chr10 104523185 104523491 -35793274 + AluSq SINE Alu 1 309 -4 590 115 0 0 chr10 104523542 104523620 -35793145 + AluSg/x SINE Alu 208 285 -27 181 0 0 0 chr10 104523620 104523640 -35793125 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2325 95 20 3 chr10 104523649 104523955 -35792810 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr10 104523978 104524020 -35792745 + AT_rich Low_complexity Low_complexity 1 42 0 2135 92 7 0 chr10 104524483 104524767 -35791998 - AluSg SINE Alu -24 286 1 41522 63 16 5 chr10 104524803 104530883 -35785882 + L1PA5 LINE L1 5 6149 -5 25 0 0 0 chr10 104530883 104530908 -35785857 + AT_rich Low_complexity Low_complexity 1 25 0 738 160 0 8 chr10 104531160 104531281 -35785484 + FLAM_C SINE Alu 1 122 -180 681 101 0 0 chr10 104531281 104531380 -35785385 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 1555 86 31 39 chr10 104532006 104532263 -35784502 + L1MA2 LINE L1 6048 6302 -2 228 392 31 0 chr10 104532599 104532729 -35784036 + L2 LINE L2 3175 3308 -5 311 44 22 0 chr10 104532991 104533036 -35783729 + (TG)n Simple_repeat Simple_repeat 1 46 0 24 0 0 0 chr10 104536798 104536822 -35779943 + AT_rich Low_complexity Low_complexity 1 24 0 256 204 102 34 chr10 104538097 104538185 -35778580 - L1MC5 LINE L1 -63 7898 7805 1054 167 39 0 chr10 104540460 104540640 -35776125 - AluJb SINE Alu -23 289 103 813 168 0 0 chr10 104540717 104540848 -35775917 - FLAM_C SINE Alu -12 131 1 2115 105 0 3 chr10 104541037 104541360 -35775405 - AluSx SINE Alu 0 312 1 1630 127 25 0 chr10 104541360 104541597 -35775168 + Tigger3(Golem) DNA MER2_type 2790 3032 0 713 264 75 14 chr10 104541962 104542174 -35774591 + MIR SINE MIR 2 226 -36 304 128 0 0 chr10 104542175 104542222 -35774543 + FLAM SINE Alu 86 132 -1 1337 116 5 0 chr10 104542231 104542421 -35774344 + AluSx SINE Alu 2 192 -120 2271 62 41 0 chr10 104542424 104542715 -35774050 - AluY SINE Alu -8 303 1 442 223 78 0 chr10 104542813 104542916 -35773849 + MIR SINE MIR 152 262 0 225 333 11 33 chr10 104543362 104543452 -35773313 - L2 LINE L2 0 3272 3185 1897 174 29 10 chr10 104543575 104543961 -35772804 - L1MB7 LINE L1 -1 6183 5791 1917 155 3 0 chr10 104543962 104544259 -35772506 + AluSx SINE Alu 1 298 -14 903 206 28 42 chr10 104544259 104544473 -35772292 - L2 LINE L2 -852 2462 2252 2256 89 0 0 chr10 104544887 104545180 -35771585 - AluSg SINE Alu -17 293 1 2189 98 3 7 chr10 104545276 104545581 -35771184 + AluSx SINE Alu 1 304 -8 470 163 0 25 chr10 104545588 104545705 -35771060 + AluY SINE Alu 204 318 0 2041 72 16 59 chr10 104546327 104546631 -35770134 + AluY SINE Alu 1 291 -20 2969 191 95 46 chr10 104547061 104547594 -35769171 - L1MD2 LINE L1 -6 6353 5848 209 33 33 0 chr10 104547594 104547624 -35769141 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2232 86 3 0 chr10 104547626 104547916 -35768849 - AluY SINE Alu -20 291 1 2969 191 95 46 chr10 104547916 104548085 -35768680 - L1MD2 LINE L1 -511 5848 5605 1839 146 0 22 chr10 104548085 104548401 -35768364 - AluSx SINE Alu -3 309 1 2969 191 95 46 chr10 104548401 104548459 -35768306 - L1MD2 LINE L1 -754 5605 5551 513 295 85 30 chr10 104548549 104548749 -35768016 + MIR SINE MIR 35 245 -17 2133 110 0 3 chr10 104548899 104549200 -35767565 - AluSx SINE Alu -12 300 1 251 337 11 15 chr10 104549498 104549607 -35767158 - MIR SINE MIR -69 139 47 214 260 21 62 chr10 104549707 104549803 -35766962 + MIR3 SINE MIR 115 206 -2 550 231 73 29 chr10 104549882 104550081 -35766684 + MIR SINE MIR 6 213 -49 688 154 46 8 chr10 104551044 104551174 -35765591 + AluJo SINE Alu 2 136 -176 22 0 0 0 chr10 104551647 104551669 -35765096 + AT_rich Low_complexity Low_complexity 1 22 0 267 311 81 20 chr10 104555514 104555662 -35761103 - MIR3 SINE MIR -29 179 23 349 250 199 32 chr10 104558478 104558495 -35758270 - MIR3 SINE MIR -7 201 188 2404 66 0 0 chr10 104558495 104558797 -35757968 + AluY SINE Alu 1 302 -9 349 250 199 32 chr10 104558797 104558935 -35757830 - MIR3 SINE MIR -20 188 20 4084 226 65 46 chr10 104561236 104562034 -35754731 + L1MD2 LINE L1 3132 3913 -2233 1263 156 138 70 chr10 104562034 104562405 -35754360 + MSTD LTR MaLR 1 396 0 4084 226 65 46 chr10 104562405 104562543 -35754222 + L1MD2 LINE L1 3913 4047 -2099 2088 105 10 0 chr10 104562543 104562839 -35753926 - AluSq SINE Alu -14 299 1 4084 226 65 46 chr10 104562839 104563302 -35753463 + L1MD2 LINE L1 4047 4559 -1587 2311 216 55 49 chr10 104563306 104563409 -35753356 + L1MD2 LINE L1 5682 5783 -576 2381 61 0 0 chr10 104563409 104563704 -35753061 + AluY SINE Alu 1 295 -16 2311 216 55 49 chr10 104563704 104564259 -35752506 + L1MD2 LINE L1 5783 6344 -15 188 212 12 35 chr10 104564263 104564348 -35752417 + GA-rich Low_complexity Low_complexity 2 84 0 303 311 127 78 chr10 104564473 104565143 -35751622 + L2 LINE L2 2399 3125 -147 2156 100 0 7 chr10 104565143 104565443 -35751322 - AluSc SINE Alu -11 298 1 303 311 127 78 chr10 104565443 104565544 -35751221 + L2 LINE L2 3125 3220 -52 328 266 110 18 chr10 104565578 104565687 -35751078 + L2 LINE L2 3194 3312 -1 1177 81 132 0 chr10 104565953 104565983 -35750782 - MER107 DNA MER1_type 0 197 172 206 61 0 30 chr10 104565983 104566016 -35750749 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1177 81 132 0 chr10 104566016 104566159 -35750606 - MER107 DNA MER1_type -25 172 1 681 326 94 20 chr10 104566193 104566543 -35750222 + L2 LINE L2 2896 3271 -1 2097 109 0 3 chr10 104570630 104570933 -35745832 - AluSx SINE Alu -10 302 1 1690 123 0 114 chr10 104571242 104571584 -35745181 + AluJb SINE Alu 1 303 -9 218 246 27 17 chr10 104572190 104572258 -35744507 + CT-rich Low_complexity Low_complexity 1 68 0 835 158 67 12 chr10 104573588 104573752 -35743013 + MER5B DNA MER1_type 1 173 -5 2278 66 3 10 chr10 104573752 104574053 -35742712 - AluSp SINE Alu -14 299 1 426 80 9 143 chr10 104574062 104574174 -35742591 - L1PA13 LINE L1 0 6163 6067 547 309 23 16 chr10 104574363 104574555 -35742210 - MIR SINE MIR -50 212 16 482 283 145 13 chr10 104574714 104574873 -35741892 + MER5A DNA MER1_type 10 189 0 218 315 74 19 chr10 104574873 104574980 -35741785 - L2 LINE L2 -59 3254 3142 339 44 0 0 chr10 104575612 104575657 -35741108 + (CA)n Simple_repeat Simple_repeat 1 45 0 328 294 210 37 chr10 104576759 104576973 -35739792 - MIR SINE MIR -6 256 6 816 199 6 6 chr10 104577136 104577292 -35739473 + FRAM SINE Alu 1 156 -10 201 143 0 29 chr10 104578664 104578699 -35738066 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 181 300 75 25 chr10 104579777 104579857 -35736908 + MER5B DNA MER1_type 41 124 -54 655 231 31 115 chr10 104580193 104580479 -35736286 - MIR SINE MIR 0 262 1 679 188 0 51 chr10 104581806 104581944 -35734821 + FLAM_A SINE Alu 1 131 -2 329 219 154 41 chr10 104582215 104582338 -35734427 - MIR SINE MIR -105 157 21 305 242 63 32 chr10 104583149 104583244 -35733521 - MIR3 SINE MIR -38 170 73 2095 117 0 10 chr10 104583779 104584087 -35732678 - AluSx SINE Alu -7 305 1 389 209 0 159 chr10 104584111 104584220 -35732545 - L2 LINE L2 0 3313 3237 2158 115 0 0 chr10 104584220 104584525 -35732240 + AluSx SINE Alu 1 305 -7 389 209 0 159 chr10 104584525 104584578 -35732187 - L2 LINE L2 -76 3237 3177 1243 103 0 0 chr10 104585144 104585318 -35731447 + AluSg/x SINE Alu 127 300 -10 1869 137 3 3 chr10 104585332 104585624 -35731141 + AluJb SINE Alu 6 297 -15 527 269 62 7 chr10 104585821 104585966 -35730799 + MIR SINE MIR 103 255 -7 2405 75 0 7 chr10 104586683 104586991 -35729774 + AluY SINE Alu 1 306 -5 1613 276 110 68 chr10 104587562 104587682 -35729083 + L2 LINE L2 2172 2285 -1028 1719 116 0 0 chr10 104587682 104587924 -35728841 - AluSx SINE Alu -15 297 56 1613 276 110 68 chr10 104587924 104588899 -35727866 + L2 LINE L2 2285 3289 -24 213 271 51 0 chr10 104589068 104589127 -35727638 + MIR3 SINE MIR 121 182 -26 348 255 62 16 chr10 104589310 104589476 -35727289 - MIR SINE MIR -32 230 7 2151 95 14 0 chr10 104590778 104591072 -35725693 + AluSx SINE Alu 1 298 -14 2123 109 0 13 chr10 104591520 104591823 -35724942 + AluSx SINE Alu 2 300 -12 1757 169 0 0 chr10 104591831 104592115 -35724650 + AluJb SINE Alu 1 284 -28 276 305 61 0 chr10 104592192 104592274 -35724491 + L2 LINE L2 3184 3270 -2 1365 199 42 0 chr10 104592543 104592829 -35723936 + AluJo SINE Alu 1 298 -14 1740 134 31 3 chr10 104593156 104593448 -35723317 - AluSx SINE Alu -7 305 6 1404 175 28 21 chr10 104593457 104593743 -35723022 - AluJo SINE Alu -22 290 3 309 261 34 11 chr10 104594461 104594549 -35722216 + GA-rich Low_complexity Low_complexity 1 90 0 296 325 57 32 chr10 104595035 104595192 -35721573 + L2 LINE L2 2635 2795 -519 * 379 175 0 50 chr10 104595178 104595258 -35721507 + L2 LINE L2 3194 3269 -3 515 288 31 47 chr10 104595334 104595525 -35721240 + MER5A DNA MER1_type 1 188 -1 1865 161 0 7 chr10 104595571 104595876 -35720889 - AluSx SINE Alu -9 303 1 432 0 0 0 chr10 104595933 104595981 -35720784 + (TG)n Simple_repeat Simple_repeat 2 49 0 432 0 0 0 chr10 104596035 104596083 -35720682 + (TG)n Simple_repeat Simple_repeat 2 49 0 210 300 100 0 chr10 104597418 104597508 -35719257 - MIR3 SINE MIR -23 185 87 2087 128 7 0 chr10 104597638 104597944 -35718821 + AluSq SINE Alu 1 308 -5 1809 137 24 89 chr10 104598034 104598131 -35718634 + Tigger3(Golem) DNA MER2_type 1 103 -2925 2158 115 7 0 chr10 104598131 104598435 -35718330 - AluSq SINE Alu -7 306 1 1809 137 24 89 chr10 104598435 104598709 -35718056 + Tigger3(Golem) DNA MER2_type 103 3028 0 750 154 0 0 chr10 104601043 104601160 -35715605 + FLAM_C SINE Alu 1 117 -26 4761 149 38 27 chr10 104601365 104601407 -35715358 - L1MB7 LINE L1 -16 6168 6128 2066 126 10 0 chr10 104601407 104601716 -35715049 + AluSx SINE Alu 1 312 0 4761 149 38 27 chr10 104601716 104602659 -35714106 - L1MB7 LINE L1 -56 6128 5172 1070 188 210 111 chr10 104602664 104602970 -35713795 - L1MB7 LINE L1 -2190 3956 3682 2277 91 0 3 chr10 104602970 104603278 -35713487 - AluY SINE Alu -2 309 3 1070 188 210 111 chr10 104603278 104603344 -35713421 - L1MB7 LINE L1 -2464 3682 3624 2164 105 3 6 chr10 104603344 104603657 -35713108 - AluSx SINE Alu 0 312 1 1453 156 10 73 chr10 104603657 104603971 -35712794 - AluJb SINE Alu -16 296 3 1070 188 210 111 chr10 104603971 104604225 -35712540 - L1MB7 LINE L1 -2521 3625 3266 1700 181 0 3 chr10 104604238 104604537 -35712228 - AluJb SINE Alu -14 298 1 1278 169 0 0 chr10 104604597 104604810 -35711955 + AluJb SINE Alu 86 298 -14 2313 200 87 71 chr10 104604947 104605582 -35711183 - MLT1E1 LTR MaLR -9 645 1 206 205 0 0 chr10 104606266 104606305 -35710460 + (CGG)n Simple_repeat Simple_repeat 2 40 0 819 154 0 0 chr10 104607363 104607506 -35709259 + FLAM_C SINE Alu 1 143 0 399 207 57 50 chr10 104607549 104607689 -35709076 - Charlie8 DNA MER1_type -2237 180 40 2119 94 42 0 chr10 104608866 104609154 -35707611 + AluSx SINE Alu 1 300 -12 1674 139 0 79 chr10 104609219 104609549 -35707216 - AluJb SINE Alu -8 304 1 771 324 73 9 chr10 104609812 104610152 -35706613 - MLT1I LTR MaLR -47 362 1 939 103 0 0 chr10 104610311 104610463 -35706302 - AluSp/q SINE Alu 0 315 164 26 0 0 0 chr10 104610479 104610505 -35706260 + AT_rich Low_complexity Low_complexity 1 26 0 828 169 0 15 chr10 104610597 104610733 -35706032 + FLAM_C SINE Alu 2 135 -8 429 323 8 8 chr10 104611113 104611237 -35705528 + MIR SINE MIR 18 141 -67 1986 112 3 23 chr10 104611250 104611553 -35705212 + AluSc SINE Alu 1 297 -12 865 211 0 12 chr10 104611562 104611733 -35705032 + FRAM SINE Alu 1 169 -7 1069 142 6 0 chr10 104611806 104611982 -35704783 - AluSg/x SINE Alu 0 312 136 1604 161 7 14 chr10 104612090 104612369 -35704396 - Tigger3(Golem) DNA MER2_type 0 3038 2762 243 62 0 0 chr10 104612456 104612488 -35704277 - Tigger3(Golem) DNA MER2_type -275 2754 2723 507 200 0 0 chr10 104612489 104612569 -35704196 - Tigger3(Golem) DNA MER2_type -2949 80 1 2369 74 0 6 chr10 104612659 104612971 -35703794 - AluY SINE Alu 0 311 2 231 36 0 0 chr10 104613164 104613192 -35703573 + (T)n Simple_repeat Simple_repeat 1 28 0 287 237 93 59 chr10 104613215 104613333 -35703432 + L2 LINE L2 3186 3307 -6 1681 138 0 70 chr10 104613496 104613823 -35702942 - AluJb SINE Alu -1 311 8 2139 80 7 3 chr10 104613900 104614187 -35702578 - AluY SINE Alu -22 289 2 827 159 15 0 chr10 104614613 104614745 -35702020 + AluJb SINE Alu 2 135 -177 2268 92 0 10 chr10 104617050 104617356 -35699409 - AluSx SINE Alu -8 304 2 210 143 0 0 chr10 104619301 104619336 -35697429 + (TG)n Simple_repeat Simple_repeat 2 36 0 444 67 0 0 chr10 104619361 104619421 -35697344 + (TG)n Simple_repeat Simple_repeat 2 61 0 291 250 80 0 chr10 104619879 104619979 -35696786 + MER91C DNA MER1_type 1 108 -32 183 80 0 0 chr10 104620061 104620086 -35696679 + (T)n Simple_repeat Simple_repeat 1 25 0 241 252 193 25 chr10 104620672 104620791 -35695974 - MIR SINE MIR -74 188 50 193 376 80 8 chr10 104621027 104621152 -35695613 + MIR3 SINE MIR 43 176 -32 889 202 60 68 chr10 104623965 104624217 -35692548 + MIR SINE MIR 1 250 -12 195 162 189 0 chr10 104624185 104624222 -35692543 + L2 LINE L2 3216 3259 -13 * 826 103 8 8 chr10 104624672 104624789 -35691976 + FLAM_C SINE Alu 1 117 -16 29 28 0 0 chr10 104624789 104624825 -35691940 + AT_rich Low_complexity Low_complexity 1 36 0 2199 94 0 0 chr10 104624856 104625142 -35691623 + AluSq SINE Alu 16 301 -12 205 217 65 0 chr10 104625211 104625257 -35691508 - MIR SINE MIR -2 260 212 * 240 328 181 28 chr10 104625256 104625433 -35691332 - L2 LINE L2 -92 3180 2977 214 266 292 9 chr10 104626199 104626312 -35690453 + MIR SINE MIR 2 146 -116 507 254 172 14 chr10 104626993 104627202 -35689563 + MIR SINE MIR 20 261 -1 299 318 68 30 chr10 104627521 104627653 -35689112 + MIR3 SINE MIR 5 141 -67 2118 83 17 10 chr10 104627760 104628061 -35688704 - AluSp SINE Alu -10 303 1 239 267 57 38 chr10 104628071 104628176 -35688589 + MIR SINE MIR 150 256 -6 679 195 8 8 chr10 104628637 104628765 -35688000 + FLAM_C SINE Alu 2 129 -4 508 123 0 0 chr10 104629362 104629435 -35687330 - AluJ/FRAM SINE Alu -12 300 228 1673 140 18 7 chr10 104629748 104630033 -35686732 - AluJo SINE Alu -24 288 1 880 233 83 38 chr10 104630226 104630514 -35686251 + MER102a DNA MER1_type 27 327 -3 2465 222 63 24 chr10 104631391 104632007 -35684758 + L3 LINE CR1 450 1089 -488 356 274 44 9 chr10 104632982 104633095 -35683670 - MER5A DNA MER1_type -65 124 8 459 0 0 0 chr10 104633651 104633702 -35683063 + (TG)n Simple_repeat Simple_repeat 2 52 0 217 261 0 0 chr10 104633927 104633973 -35682792 - MIR3 SINE MIR -9 199 154 2108 115 0 0 chr10 104634291 104634578 -35682187 + AluSx SINE Alu 1 287 -25 194 186 47 23 chr10 104635862 104635905 -35680860 + MIR SINE MIR 16 59 -203 568 223 151 6 chr10 104635988 104636154 -35680611 - MIR SINE MIR -20 242 53 779 191 58 40 chr10 104636233 104636406 -35680359 + MIR SINE MIR 66 241 -21 240 35 0 0 chr10 104636434 104636463 -35680302 + (TCC)n Simple_repeat Simple_repeat 2 30 0 231 213 21 0 chr10 104638010 104638057 -35678708 - L3b LINE CR1 -240 1343 1296 438 20 0 0 chr10 104638662 104638713 -35678052 + (CA)n Simple_repeat Simple_repeat 2 52 0 261 0 0 0 chr10 104638712 104638741 -35678024 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 398 196 206 19 chr10 104638846 104638953 -35677812 - MIR3 SINE MIR -52 156 30 477 244 210 74 chr10 104639028 104639418 -35677347 - L2 LINE L2 0 3313 2871 198 180 20 80 chr10 104639748 104639798 -35676967 - L2 LINE L2 -6 3307 3261 279 79 0 0 chr10 104640836 104640874 -35675891 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 170 0 0 chr10 104641581 104641634 -35675131 + (TG)n Simple_repeat Simple_repeat 2 54 0 2330 86 0 0 chr10 104642459 104642762 -35674003 + AluSq SINE Alu 1 303 -10 2071 104 0 0 chr10 104642762 104643040 -35673725 + AluSg SINE Alu 1 278 -32 429 204 65 65 chr10 104643290 104643398 -35673367 + L2 LINE L2 3206 3313 0 203 278 0 14 chr10 104643775 104643919 -35672846 + (CAGA)n Simple_repeat Simple_repeat 2 143 0 1039 289 48 52 chr10 104643973 104644176 -35672589 + MLT1L LTR MaLR 12 214 -401 2126 109 3 0 chr10 104644176 104644469 -35672296 - AluSp SINE Alu -19 294 1 1039 289 48 52 chr10 104644469 104644749 -35672016 + MLT1L LTR MaLR 214 493 -122 268 232 11 11 chr10 104644906 104645001 -35671764 + CT-rich Low_complexity Low_complexity 1 95 0 2044 114 7 0 chr10 104645362 104645651 -35671114 - AluSx SINE Alu -21 291 1 256 242 95 11 chr10 104645806 104645901 -35670864 - L2 LINE L2 -8 3305 3203 206 345 0 0 chr10 104646542 104646597 -35670168 + L2 LINE L2 3005 3059 -213 416 198 151 0 chr10 104647014 104647120 -35669645 - MIR SINE MIR -14 248 127 430 204 97 0 chr10 104647155 104647248 -35669517 + MIR SINE MIR 21 122 -140 533 271 73 0 chr10 104647409 104647560 -35669205 + MIR SINE MIR 101 262 0 286 253 43 129 chr10 104647638 104647759 -35669006 - MIR SINE MIR -44 218 125 1561 137 119 7 chr10 104647759 104648036 -35668729 - AluSg1 SINE Alu -1 308 1 286 253 43 129 chr10 104648036 104648147 -35668618 - MIR SINE MIR -137 125 6 905 256 67 6 chr10 104648645 104649021 -35667744 - LTR16A LTR ERVL -11 439 1 269 250 33 125 chr10 104649052 104649204 -35667561 - L2 LINE L2 -219 3053 2916 766 212 93 26 chr10 104649328 104649521 -35667244 + MIR SINE MIR 57 262 0 249 294 239 0 chr10 104650429 104650538 -35666227 + L2 LINE L2 3138 3272 0 327 304 61 0 chr10 104650870 104650985 -35665780 + MIR SINE MIR 25 146 -116 309 287 77 7 chr10 104651076 104651153 -35665612 - MIR SINE MIR -90 172 86 210 275 107 38 chr10 104651153 104651284 -35665481 + MIR SINE MIR 4 143 -119 672 194 65 0 chr10 104651638 104651762 -35665003 - MER5A DNA MER1_type -1 188 57 3908 196 53 42 chr10 104651765 104652709 -35664056 - L1ME1 LINE L1 -6 6160 5228 1986 139 10 0 chr10 104652709 104653018 -35663747 - AluSx SINE Alu 0 312 1 3908 196 53 42 chr10 104653018 104653119 -35663646 - L1ME1 LINE L1 -938 5228 5130 1876 135 0 61 chr10 104653119 104653446 -35663319 - AluSx SINE Alu -5 307 1 3908 196 53 42 chr10 104653446 104654121 -35662644 - L1ME1 LINE L1 -1036 5130 4417 2101 118 0 0 chr10 104654121 104654417 -35662348 - AluSx SINE Alu -16 296 1 3908 196 53 42 chr10 104654417 104654523 -35662242 - L1ME1 LINE L1 -1749 4417 4314 791 190 0 14 chr10 104654523 104654665 -35662100 - MER5A DNA MER1_type -49 140 1 280 331 85 52 chr10 104654690 104655125 -35661640 + L2 LINE L2 2344 2800 -514 1050 223 109 88 chr10 104655125 104655622 -35661143 + MLT1J LTR MaLR 5 511 0 280 331 85 52 chr10 104655622 104655690 -35661075 + L2 LINE L2 2800 2864 -450 184 343 15 0 chr10 104655805 104655872 -35660893 + L2 LINE L2 3016 3083 -189 184 316 42 42 chr10 104655936 104656031 -35660734 + L2 LINE L2 3219 3313 0 731 231 23 106 chr10 104656261 104656373 -35660392 - MIR SINE MIR -3 259 139 2265 95 0 0 chr10 104656373 104656677 -35660088 + AluSc SINE Alu 1 304 -5 731 231 23 106 chr10 104656677 104656828 -35659937 - MIR SINE MIR -123 139 18 234 288 83 61 chr10 104656856 104656988 -35659777 + L2 LINE L2 3133 3267 -5 4621 180 116 68 chr10 104657000 104658730 -35658035 + L1MD1 LINE L1 16 1924 -4616 3945 136 26 0 chr10 104658717 104659341 -35657424 + L1MC1 LINE L1 5544 6183 -150 * 6494 217 66 46 chr10 104659356 104661738 -35655027 + L1MD1 LINE L1 1912 4245 -2391 1580 174 46 0 chr10 104661738 104662019 -35654746 + AluSx SINE Alu 1 294 -18 6494 217 66 46 chr10 104662019 104662367 -35654398 + L1MD1 LINE L1 4245 4585 -2051 1862 155 0 22 chr10 104662367 104662684 -35654081 + AluJo SINE Alu 1 310 -2 6494 217 66 46 chr10 104662684 104663140 -35653625 + L1MD1 LINE L1 4585 5030 -1606 1994 123 0 7 chr10 104663140 104663464 -35653301 + AluSc SINE Alu 1 309 0 6494 217 66 46 chr10 104663464 104663601 -35653164 + L1MD1 LINE L1 5030 5163 -1473 806 183 0 0 chr10 104663601 104663732 -35653033 + FLAM_C SINE Alu 3 133 0 6494 217 66 46 chr10 104663732 104663971 -35652794 + L1MD1 LINE L1 5163 5396 -1240 1560 159 52 7 chr10 104663971 104664266 -35652499 + AluJb SINE Alu 1 307 0 6494 217 66 46 chr10 104664266 104664471 -35652294 + L1MD1 LINE L1 5396 5595 -1041 608 128 0 0 chr10 104664471 104664557 -35652208 + 7SLRNA srpRNA srpRNA 232 317 -3 6494 217 66 46 chr10 104664557 104664966 -35651799 + L1MD1 LINE L1 5595 5994 -642 1857 137 10 23 chr10 104664966 104665272 -35651493 + AluSx SINE Alu 1 302 -10 6494 217 66 46 chr10 104665272 104665609 -35651156 + L1MD1 LINE L1 5994 6636 0 2046 136 3 0 chr10 104665711 104666019 -35650746 + AluSx SINE Alu 1 309 -3 1532 169 11 4 chr10 104666179 104666285 -35650480 + AluJb SINE Alu 17 121 -191 249 108 0 0 chr10 104666285 104666322 -35650443 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1532 169 11 4 chr10 104666322 104666488 -35650277 + AluJb SINE Alu 121 291 -21 22 56 0 0 chr10 104666797 104666833 -35649932 + AT_rich Low_complexity Low_complexity 1 36 0 518 208 0 8 chr10 104666924 104667049 -35649716 + CT-rich Low_complexity Low_complexity 1 124 0 2168 92 7 0 chr10 104667049 104667343 -35649422 - AluSx SINE Alu -16 296 1 2370 51 0 0 chr10 104667679 104667972 -35648793 + AluY SINE Alu 1 293 -18 345 191 0 15 chr10 104668159 104668227 -35648538 - MIR SINE MIR 0 262 196 1348 147 0 0 chr10 104668247 104668444 -35648321 - AluJb SINE Alu -30 282 86 703 155 0 9 chr10 104668444 104668586 -35648179 - FLAM_C SINE Alu 0 143 17 1177 164 4 40 chr10 104668605 104668831 -35647934 - AluJb SINE Alu -14 298 81 520 282 133 6 chr10 104668831 104669012 -35647753 - MIR SINE MIR -58 204 1 762 301 47 77 chr10 104669973 104670028 -35646737 + L2 LINE L2 2944 2999 -273 2354 83 0 0 chr10 104670028 104670330 -35646435 - AluSx SINE Alu -10 302 1 762 301 47 77 chr10 104670330 104670613 -35646152 + L2 LINE L2 2999 3272 0 280 182 11 102 chr10 104671020 104671108 -35645657 - MER103 DNA DNA -85 81 2 1474 232 61 0 chr10 104671135 104671428 -35645337 - MLT1A1 LTR MaLR -2 363 53 1442 200 109 9 chr10 104671469 104671789 -35644976 - MSTD LTR MaLR 0 396 45 2078 117 7 0 chr10 104671790 104672088 -35644677 - AluSx SINE Alu -12 300 1 634 270 89 44 chr10 104672214 104672462 -35644303 + MIR SINE MIR 4 262 0 812 255 115 17 chr10 104673211 104673446 -35643319 + MER112 DNA MER1_type 2 259 -1 230 274 15 118 chr10 104673644 104673717 -35643048 - L2 LINE L2 -16 3256 3177 1963 134 0 14 chr10 104673717 104674008 -35642757 + AluSx SINE Alu 1 287 -25 2512 55 0 0 chr10 104674016 104674325 -35642440 + AluY SINE Alu 1 309 -2 230 274 15 118 chr10 104674325 104674377 -35642388 - L2 LINE L2 -102 3170 3136 2272 96 0 0 chr10 104674587 104674889 -35641876 + AluSc SINE Alu 1 302 -7 417 298 58 99 chr10 104674973 104675469 -35641296 + L1MEd LINE L1 268 743 -5376 1905 159 0 3 chr10 104675473 104675782 -35640983 + AluJb SINE Alu 1 308 -4 584 168 0 8 chr10 104675780 104675911 -35640854 + GA-rich Low_complexity Low_complexity 3 132 0 578 265 92 67 chr10 104675913 104676795 -35639970 + L1MEd LINE L1 739 1752 -738 2308 93 0 7 chr10 104677047 104677336 -35639429 + AluSc SINE Alu 1 287 -22 536 318 38 13 chr10 104677525 104677840 -35638925 + L1MEd LINE L1 2093 2415 -3714 2140 103 3 24 chr10 104678914 104679233 -35637532 + AluSx SINE Alu 1 313 0 2562 235 91 16 chr10 104680249 104681113 -35635652 + L1MC4 LINE L1 7114 8042 0 248 200 17 0 chr10 104681148 104681208 -35635557 + L1MC5 LINE L1 7178 7238 -723 308 316 15 53 chr10 104681222 104681355 -35635410 + L1MC4a LINE L1 7231 7358 -450 1309 224 117 55 chr10 104681358 104681402 -35635363 + L1MC5 LINE L1 7271 7311 -650 2495 87 0 0 chr10 104681402 104681712 -35635053 + AluY SINE Alu 2 311 0 1309 224 117 55 chr10 104681712 104682233 -35634532 + L1MC5 LINE L1 7311 7871 -90 305 184 0 0 chr10 104682242 104682291 -35634474 + L1MC4 LINE L1 6655 6703 -1339 864 68 0 0 chr10 104682292 104682395 -35634370 - AluY SINE Alu -11 300 198 328 172 11 11 chr10 104684082 104684175 -35632590 + GA-rich Low_complexity Low_complexity 1 93 0 216 111 0 0 chr10 104684888 104684924 -35631841 + (TG)n Simple_repeat Simple_repeat 2 37 0 366 123 0 0 chr10 104685205 104685262 -35631503 + (TG)n Simple_repeat Simple_repeat 2 58 0 2078 133 7 0 chr10 104686766 104687051 -35629714 - AluSx SINE Alu -24 288 2 535 311 46 84 chr10 104689564 104690242 -35626523 + L2 LINE L2 2325 2976 -338 239 259 268 27 chr10 104690513 104690625 -35626140 + L2 LINE L2 3134 3272 0 815 262 23 5 chr10 104691331 104691545 -35625220 - MIR SINE MIR 0 262 45 198 0 0 0 chr10 104691818 104691840 -35624925 + (CCCCCG)n Simple_repeat Simple_repeat 4 25 0 31 0 0 0 chr10 104691896 104691927 -35624838 + GC_rich Low_complexity Low_complexity 1 31 0 202 224 30 30 chr10 104692091 104692158 -35624607 + G-rich Low_complexity Low_complexity 6 72 0 204 270 60 10 chr10 104692208 104692308 -35624457 + (CAGAGA)n Simple_repeat Simple_repeat 3 107 0 189 74 0 0 chr10 104692338 104692365 -35624400 + (TG)n Simple_repeat Simple_repeat 2 28 0 369 0 0 0 chr10 104692495 104692536 -35624229 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 296 26 58 chr10 104694312 104694468 -35622297 + MIR3 SINE MIR 41 190 -52 2370 101 0 3 chr10 104698184 104698482 -35618283 + AluSq SINE Alu 1 297 -16 1986 136 17 0 chr10 104699052 104699347 -35617418 + AluSx SINE Alu 1 300 -12 245 311 0 19 chr10 104700632 104700738 -35616027 + C-rich Low_complexity Low_complexity 3 106 0 186 103 0 0 chr10 104700739 104700768 -35615997 + (TC)n Simple_repeat Simple_repeat 1 29 0 459 0 0 0 chr10 104702271 104702322 -35614443 + (TG)n Simple_repeat Simple_repeat 2 52 0 2280 104 0 28 chr10 104702790 104703107 -35613658 - AluY SINE Alu -3 308 1 2109 134 0 14 chr10 104703115 104703406 -35613359 - AluSx SINE Alu -25 287 1 217 233 14 68 chr10 104703406 104703479 -35613286 + L2 LINE L2 3188 3256 -16 766 255 115 17 chr10 104703677 104703912 -35612853 - MER112 DNA MER1_type -1 259 2 631 270 89 44 chr10 104704661 104704909 -35611856 - MIR SINE MIR 0 262 4 2224 117 7 0 chr10 104705035 104705333 -35611432 + AluSx SINE Alu 1 300 -12 1347 203 109 9 chr10 104705334 104705654 -35611111 + MSTD LTR MaLR 45 396 0 1392 232 61 0 chr10 104705695 104705988 -35610777 + MLT1A1 LTR MaLR 53 363 -2 261 182 11 102 chr10 104706015 104706103 -35610662 + MER103 DNA DNA 2 81 -85 766 301 47 77 chr10 104706510 104706793 -35609972 - L2 LINE L2 0 3272 2999 2501 83 0 0 chr10 104706793 104707095 -35609670 + AluSx SINE Alu 1 302 -10 766 301 47 77 chr10 104707095 104707150 -35609615 - L2 LINE L2 -273 2999 2944 514 282 133 6 chr10 104708111 104708292 -35608473 + MIR SINE MIR 1 204 -58 1286 164 4 40 chr10 104708292 104708518 -35608247 + AluJb SINE Alu 81 298 -14 717 155 0 9 chr10 104708537 104708679 -35608086 + FLAM_C SINE Alu 17 143 0 1448 147 0 0 chr10 104708679 104708876 -35607889 + AluJb SINE Alu 86 282 -30 340 191 0 15 chr10 104708896 104708964 -35607801 + MIR SINE MIR 196 262 0 2502 51 0 0 chr10 104709151 104709444 -35607321 - AluY SINE Alu -18 293 1 2311 92 7 0 chr10 104709780 104710074 -35606691 + AluSx SINE Alu 1 296 -16 518 208 0 8 chr10 104710074 104710199 -35606566 + GA-rich Low_complexity Low_complexity 1 124 0 22 56 0 0 chr10 104710290 104710326 -35606439 + AT_rich Low_complexity Low_complexity 1 36 0 1663 169 11 4 chr10 104710635 104710801 -35605964 - AluJb SINE Alu -21 291 121 249 108 0 0 chr10 104710801 104710838 -35605927 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1663 169 11 4 chr10 104710838 104710944 -35605821 - AluJb SINE Alu -191 121 17 2199 136 3 0 chr10 104711104 104711412 -35605353 - AluSx SINE Alu -3 309 1 1652 179 39 18 chr10 104711514 104711850 -35604915 - L1MD1 LINE L1 0 6242 5900 223 167 0 0 chr10 104712092 104712134 -35604631 + (TG)n Simple_repeat Simple_repeat 1 42 0 339 262 77 27 chr10 104712484 104712630 -35604135 + MIR3 SINE MIR 33 185 -23 642 266 161 14 chr10 104713914 104714132 -35602633 + MIR SINE MIR 12 261 -1 505 314 120 8 chr10 104714171 104714413 -35602352 - L3 LINE CR1 -5 1572 1304 2564 75 0 0 chr10 104715076 104715383 -35601382 + AluY SINE Alu 1 307 -4 389 191 0 57 chr10 104715658 104715763 -35601002 - MER33 DNA MER1_type -1 323 225 2050 107 0 38 chr10 104715768 104716085 -35600680 + AluSc SINE Alu 1 306 0 805 194 0 0 chr10 104716090 104716224 -35600541 - AluJo SINE Alu -178 134 1 1973 120 0 76 chr10 104716247 104716563 -35600202 + AluSx SINE Alu 1 292 -20 831 171 0 53 chr10 104716568 104716720 -35600045 - FAM SINE Alu -9 40 1 1977 148 7 3 chr10 104716740 104717037 -35599728 - AluJo SINE Alu -14 298 1 1031 161 49 22 chr10 104717042 104717266 -35599499 - MER33 DNA MER1_type -94 230 1 237 167 0 0 chr10 104718578 104718626 -35598139 + Alu SINE Alu 252 299 -1 375 187 13 13 chr10 104718689 104718764 -35598001 - L2 LINE L2 -16 3256 3182 254 355 99 20 chr10 104719240 104719696 -35597069 + L2 LINE L2 1902 2393 -921 * 501 254 76 0 chr10 104719664 104719782 -35596983 - L2 LINE L2 -1 3271 3145 1560 210 46 73 chr10 104720084 104720446 -35596319 + MLT1C LTR MaLR 5 352 -115 1988 157 3 3 chr10 104720446 104720745 -35596020 - AluSx SINE Alu -13 299 1 1560 210 46 73 chr10 104720745 104720858 -35595907 + MLT1C LTR MaLR 352 467 0 326 238 12 150 chr10 104720925 104721012 -35595753 - MIR SINE MIR -43 219 162 2183 115 0 0 chr10 104721012 104721316 -35595449 - AluSg SINE Alu -6 304 1 326 238 12 150 chr10 104721316 104721388 -35595377 - MIR SINE MIR -100 162 82 307 220 0 0 chr10 104721821 104721880 -35594885 + MIR SINE MIR 117 175 -87 343 263 0 0 chr10 104722254 104722334 -35594431 + MLT1K LTR MaLR 509 588 0 202 205 0 0 chr10 104722345 104722384 -35594381 + L2 LINE L2 3263 3301 -12 1931 146 19 13 chr10 104722571 104722879 -35593886 + AluSx SINE Alu 1 310 -2 214 219 16 154 chr10 104724489 104724612 -35592153 + MER5A DNA MER1_type 82 187 -2 377 321 77 41 chr10 104724758 104724954 -35591811 + MIR SINE MIR 9 211 -51 693 286 79 22 chr10 104725025 104725252 -35591513 - MIR SINE MIR -21 241 2 536 270 137 17 chr10 104725395 104725628 -35591137 - MIR SINE MIR 0 262 2 216 135 0 0 chr10 104725699 104725736 -35591029 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 2379 74 3 3 chr10 104726113 104726410 -35590355 + AluY SINE Alu 1 297 -14 2505 78 0 10 chr10 104726516 104726824 -35589941 - AluSp SINE Alu -8 305 1 198 264 38 0 chr10 104726870 104726923 -35589842 - L2 LINE L2 -28 3285 3231 386 314 10 0 chr10 104727422 104727524 -35589241 - L3 LINE CR1 -106 1471 1369 1895 170 0 0 chr10 104727537 104727825 -35588940 + AluJb SINE Alu 1 288 -24 328 288 102 17 chr10 104728050 104728168 -35588597 + L2 LINE L2 3140 3267 -5 567 288 12 12 chr10 104728297 104728460 -35588305 + MIR SINE MIR 78 240 -22 2199 122 6 3 chr10 104729020 104729332 -35587433 + AluSp SINE Alu 1 313 0 2325 103 0 7 chr10 104729666 104729967 -35586798 + AluSx SINE Alu 1 299 -13 464 321 33 27 chr10 104730548 104730578 -35586187 - MIR3 SINE MIR -4 204 176 2439 82 3 0 chr10 104730578 104730872 -35585893 + AluSx SINE Alu 1 295 -17 464 321 33 27 chr10 104730872 104731025 -35585740 - MIR3 SINE MIR -32 176 20 607 279 71 0 chr10 104731258 104731441 -35585324 - MIR SINE MIR -10 252 57 1829 152 29 0 chr10 104731743 104732047 -35584718 - AluSx SINE Alu 0 312 1 409 294 128 0 chr10 104732254 104732441 -35584324 + MIR SINE MIR 34 244 -18 183 42 0 0 chr10 104732640 104732664 -35584101 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2017 91 8 0 chr10 104732667 104732920 -35583845 - AluSp SINE Alu -34 279 25 289 256 99 29 chr10 104732984 104733156 -35583609 - L1MC5 LINE L1 -271 7690 7507 316 271 118 14 chr10 104733360 104733504 -35583261 + MIR SINE MIR 95 253 -9 198 0 0 0 chr10 104733611 104733633 -35583132 + (CAGCC)n Simple_repeat Simple_repeat 4 25 0 230 333 108 0 chr10 104734390 104734519 -35582246 - MIR SINE MIR -34 228 86 192 77 0 0 chr10 104736672 104736698 -35580067 + (TG)n Simple_repeat Simple_repeat 1 26 0 2691 147 31 24 chr10 104736863 104737402 -35579363 + L1MB8 LINE L1 5630 6172 -6 2190 87 0 0 chr10 104737402 104737693 -35579072 + AluY SINE Alu 20 310 0 341 269 21 11 chr10 104737707 104737800 -35578965 - MIR SINE MIR -95 113 20 782 200 50 109 chr10 104739418 104739502 -35577263 + MLT1A1 LTR MaLR 1 88 -277 2452 94 0 0 chr10 104739502 104739810 -35576955 + AluSc SINE Alu 1 308 -1 782 200 50 109 chr10 104739810 104740118 -35576647 + MLT1A1 LTR MaLR 88 412 47 2094 92 55 0 chr10 104740118 104740389 -35576376 + AluSx SINE Alu 3 288 -24 236 29 0 29 chr10 104740399 104740433 -35576332 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 782 200 50 109 chr10 104740433 104740479 -35576286 + MLT1A1 LTR MaLR 318 365 0 896 251 204 11 chr10 104740957 104741335 -35575430 + LTR33 LTR ERVL 18 468 -53 260 203 68 0 chr10 104741374 104741433 -35575332 + MIR SINE MIR 115 177 -85 322 335 87 0 chr10 104741520 104741681 -35575084 + MIR3 SINE MIR 32 206 -2 222 196 19 0 chr10 104741692 104741745 -35575020 - MIR SINE MIR -93 115 70 427 179 142 30 chr10 104742383 104742517 -35574248 + MIR SINE MIR 65 213 -49 481 270 88 58 chr10 104742547 104742719 -35574046 - MIR SINE MIR -26 236 54 2223 120 10 0 chr10 104742719 104743019 -35573746 + AluSx SINE Alu 1 303 -9 481 270 88 58 chr10 104743019 104743072 -35573693 - MIR SINE MIR -208 54 4 226 211 0 0 chr10 104744661 104744713 -35572052 + G-rich Low_complexity Low_complexity 1 52 0 2349 107 0 0 chr10 104745203 104745501 -35571264 - AluSx SINE Alu -14 298 1 491 283 66 7 chr10 104745523 104745675 -35571090 - MIR SINE MIR -57 205 45 488 277 45 19 chr10 104745712 104745867 -35570898 + MIR3 SINE MIR 30 188 -20 337 282 15 23 chr10 104747147 104747278 -35569487 - MIR SINE MIR -3 259 130 316 252 0 29 chr10 104747796 104747899 -35568866 + L2 LINE L2 3214 3313 0 211 265 0 0 chr10 104748900 104748949 -35567816 + G-rich Low_complexity Low_complexity 1 49 0 249 360 0 27 chr10 104749210 104749430 -35567335 + GA-rich Low_complexity Low_complexity 1 214 0 217 316 0 0 chr10 104749413 104749489 -35567276 + (CAGAGA)n Simple_repeat Simple_repeat 2 77 0 * 298 349 0 6 chr10 104749623 104749792 -35566973 + GA-rich Low_complexity Low_complexity 1 168 0 239 286 0 29 chr10 104749824 104749929 -35566836 + GA-rich Low_complexity Low_complexity 2 103 0 317 277 199 14 chr10 104750574 104750715 -35566050 + MIR3 SINE MIR 24 190 -18 5622 194 24 16 chr10 104850972 104852061 -35464704 + L1M1 LINE L1 725 1821 -5744 1109 120 9 4 chr10 104852188 104852920 -35463845 - HSATII Satellite Satellite -12 735 1 794 133 13 0 chr10 104852956 104853114 -35463651 - HSATII Satellite Satellite -10 160 1 1248 122 10 7 chr10 104853144 104854154 -35462611 - HSATII Satellite Satellite -99 1013 1 1061 124 13 9 chr10 104854185 104856245 -35460520 - HSATII Satellite Satellite 0 2068 1 998 124 9 8 chr10 104856256 104857282 -35459483 - HSATII Satellite Satellite 0 1027 1 1110 117 15 6 chr10 104857308 104857790 -35458975 - HSATII Satellite Satellite 0 486 1 989 116 3 19 chr10 104857817 104858139 -35458626 - HSATII Satellite Satellite -17 316 1 1184 111 7 3 chr10 104858202 104859082 -35457683 - HSATII Satellite Satellite -12 883 1 827 127 13 0 chr10 104859118 104859276 -35457489 - HSATII Satellite Satellite -10 160 1 1227 121 11 10 chr10 104859306 104860267 -35456498 - HSATII Satellite Satellite -99 961 1 1131 122 10 8 chr10 104860298 104863930 -35452835 - HSATII Satellite Satellite 0 3639 1 968 126 3 19 chr10 104863957 104864279 -35452486 - HSATII Satellite Satellite -17 316 1 1184 120 7 3 chr10 104864342 104865222 -35451543 - HSATII Satellite Satellite -17 883 1 686 158 13 0 chr10 104865258 104865416 -35451349 - HSATII Satellite Satellite -10 160 1 840 137 0 0 chr10 104865443 104865596 -35451169 - HSATII Satellite Satellite -1 169 17 1107 121 12 7 chr10 104865611 104866407 -35450358 - HSATII Satellite Satellite -1 799 1 1000 124 16 15 chr10 104866438 104867812 -35448953 - HSATII Satellite Satellite -5 1375 1 960 117 0 13 chr10 104867824 104869006 -35447759 - HSATII Satellite Satellite -97 1166 1 1043 121 8 8 chr10 104869046 104869437 -35447328 - HSATII Satellite Satellite 0 391 1 1086 122 10 12 chr10 104869464 104870410 -35446355 - HSATII Satellite Satellite -30 944 1 1142 118 8 4 chr10 104870432 104871257 -35445508 - HSATII Satellite Satellite -12 828 1 794 133 13 0 chr10 104871293 104871451 -35445314 - HSATII Satellite Satellite -10 160 1 1227 121 11 10 chr10 104871481 104872442 -35444323 - HSATII Satellite Satellite -99 961 1 1131 125 11 10 chr10 104872473 104874929 -35441836 - HSATII Satellite Satellite 0 2457 1 1122 115 10 8 chr10 104874952 104875998 -35440767 - HSATII Satellite Satellite 0 1048 1 911 129 3 19 chr10 104876025 104876347 -35440418 - HSATII Satellite Satellite -17 316 1 1118 120 7 3 chr10 104876410 104877388 -35439377 - HSATII Satellite Satellite -12 981 1 761 139 13 0 chr10 104877424 104877582 -35439183 - HSATII Satellite Satellite -10 160 1 756 143 0 0 chr10 104877612 104877752 -35439013 - HSATII Satellite Satellite -14 156 17 433 123 19 28 chr10 104877767 104877873 -35438892 - HSATII Satellite Satellite -19 151 47 1215 109 15 0 chr10 104877886 104878423 -35438342 - HSATII Satellite Satellite -99 545 1 1110 125 9 9 chr10 104878454 104879687 -35437078 - HSATII Satellite Satellite 0 3097 1866 183 132 44 29 chr10 104879687 104879755 -35437010 + (GAATG)n Satellite Satellite 2 70 0 1110 125 9 9 chr10 104879755 104881550 -35435215 - HSATII Satellite Satellite -1231 1866 1 1143 126 7 6 chr10 104881576 104882566 -35434199 - HSATII Satellite Satellite -56 990 1 716 121 36 18 chr10 104882688 104882854 -35433911 - HSATII Satellite Satellite -1 169 1 1077 115 10 9 chr10 104882884 104883959 -35432806 - HSATII Satellite Satellite -98 1076 1 1143 124 9 10 chr10 104883990 104886910 -35429855 - HSATII Satellite Satellite 0 2917 1 948 114 0 0 chr10 104886939 104887097 -35429668 - HSATII Satellite Satellite -12 158 1 761 139 13 0 chr10 104887133 104887291 -35429474 - HSATII Satellite Satellite -10 160 1 756 143 0 0 chr10 104887321 104887461 -35429304 - HSATII Satellite Satellite -14 156 17 1248 113 13 9 chr10 104887476 104888282 -35428483 - HSATII Satellite Satellite -99 809 1 1101 127 13 16 chr10 104888313 104889944 -35426821 - HSATII Satellite Satellite 0 1627 1 896 118 5 15 chr10 104889970 104890589 -35426176 - HSATII Satellite Satellite 0 612 1 647 166 0 18 chr10 104890615 104890778 -35425987 - HSATII Satellite Satellite 0 170 11 1031 116 11 17 chr10 104890814 104891353 -35425412 - HSATII Satellite Satellite -27 536 1 1086 126 1 4 chr10 104891378 104892099 -35424666 - HSATII Satellite Satellite -31 719 1 1176 118 24 0 chr10 104892128 104892999 -35423766 - HSATII Satellite Satellite -12 891 1 794 133 13 0 chr10 104893035 104893193 -35423572 - HSATII Satellite Satellite -10 160 1 1248 120 11 10 chr10 104893223 104894184 -35422581 - HSATII Satellite Satellite -99 961 1 991 109 16 29 chr10 104894215 104894966 -35421799 - HSATII Satellite Satellite 0 741 1 925 124 17 2 chr10 104895017 104895438 -35421327 - HSATII Satellite Satellite 0 427 1 183 132 44 29 chr10 104895448 104895516 -35421249 + (GAATG)n Satellite Satellite 2 70 0 1101 138 0 0 chr10 104895539 104895856 -35420909 - HSATII Satellite Satellite 0 317 1 1119 121 5 6 chr10 104895882 104896986 -35419779 - HSATII Satellite Satellite -99 1103 1 1103 120 12 5 chr10 104897018 104897626 -35419139 - HSATII Satellite Satellite -23 612 1 1031 109 8 8 chr10 104897767 104898159 -35418606 - HSATII Satellite Satellite 0 392 1 1110 116 10 8 chr10 104898185 104898573 -35418192 - HSATII Satellite Satellite 0 389 1 843 148 0 11 chr10 104898599 104898873 -35417892 - HSATII Satellite Satellite -56 270 1 1089 122 8 8 chr10 104898888 104900274 -35416491 - HSATII Satellite Satellite 0 1386 1 1160 126 9 11 chr10 104900301 104903452 -35413313 - HSATII Satellite Satellite -1 3143 1 971 130 8 8 chr10 104903483 104903866 -35412899 - HSATII Satellite Satellite 0 383 1 1086 125 8 12 chr10 104903893 104904832 -35411933 - HSATII Satellite Satellite -30 935 1 1172 110 8 4 chr10 104904861 104905686 -35411079 - HSATII Satellite Satellite -12 828 1 791 138 12 0 chr10 104905720 104905880 -35410885 - HSATII Satellite Satellite -8 162 1 786 129 0 0 chr10 104905910 104906050 -35410715 - HSATII Satellite Satellite -14 156 17 1248 110 6 9 chr10 104906065 104906871 -35409894 - HSATII Satellite Satellite -99 804 1 1003 116 14 21 chr10 104906902 104907319 -35409446 - HSATII Satellite Satellite 0 414 1 1110 125 11 8 chr10 104907330 104910533 -35406232 - HSATII Satellite Satellite 0 3213 1 989 122 3 19 chr10 104910560 104910882 -35405883 - HSATII Satellite Satellite -17 316 1 1163 132 13 2 chr10 104910945 104912312 -35404453 - HSATII Satellite Satellite -4 1382 1 910 105 24 18 chr10 104912418 104913049 -35403716 - HSATII Satellite Satellite -31 634 1 1089 132 19 0 chr10 104913064 104913535 -35403230 - HSATII Satellite Satellite -1 480 1 716 121 36 18 chr10 104913573 104913739 -35403026 - HSATII Satellite Satellite -1 169 1 826 105 18 18 chr10 104913769 104914094 -35402671 - HSATII Satellite Satellite 0 325 1 1000 99 14 21 chr10 104914144 104914562 -35402203 - HSATII Satellite Satellite 0 415 1 1143 124 11 10 chr10 104914588 104917771 -35398994 - HSATII Satellite Satellite 0 3186 1 926 125 3 19 chr10 104917798 104918120 -35398645 - HSATII Satellite Satellite -17 316 1 1238 108 7 10 chr10 104918183 104919068 -35397697 - HSATII Satellite Satellite -12 882 1 929 128 15 0 chr10 104919112 104919693 -35397072 - HSATII Satellite Satellite 0 589 1 1001 123 6 14 chr10 104919719 104920964 -35395801 - HSATII Satellite Satellite -1 1235 1 996 100 24 16 chr10 104920999 104921380 -35395385 - HSATII Satellite Satellite -1 384 1 656 160 20 0 chr10 104921407 104921557 -35395208 - HSATII Satellite Satellite -1 169 17 996 111 15 19 chr10 104921580 104922216 -35394549 - HSATII Satellite Satellite -1 633 1 1068 115 9 13 chr10 104922243 104923176 -35393589 - HSATII Satellite Satellite 0 929 1 1152 122 8 8 chr10 104923206 104923971 -35392794 - HSATII Satellite Satellite -1 765 1 910 121 18 18 chr10 104923983 104924982 -35391783 - HSATII Satellite Satellite -31 999 1 1110 130 19 0 chr10 104924997 104925468 -35391297 - HSATII Satellite Satellite -1 480 1 716 121 36 18 chr10 104925506 104925672 -35391093 - HSATII Satellite Satellite -1 169 1 1077 119 6 9 chr10 104925702 104926778 -35389987 - HSATII Satellite Satellite -40 1072 1 1000 102 14 21 chr10 104926809 104927227 -35389538 - HSATII Satellite Satellite 0 415 1 1143 124 9 12 chr10 104927253 104930736 -35386029 - HSATII Satellite Satellite -17 3471 1 231 103 0 0 chr10 104930799 104930838 -35385927 - HSATII Satellite Satellite -102 68 30 573 177 0 0 chr10 104930963 104931110 -35385655 - HSATII Satellite Satellite -7 163 17 1109 121 8 4 chr10 104931139 104931964 -35384801 - HSATII Satellite Satellite -12 828 1 827 127 13 0 chr10 104932000 104932158 -35384607 - HSATII Satellite Satellite -10 160 1 1215 126 11 6 chr10 104932188 104933126 -35383639 - HSATII Satellite Satellite -99 942 1 979 112 16 29 chr10 104933157 104933908 -35382857 - HSATII Satellite Satellite 0 741 1 908 125 23 7 chr10 104933959 104934537 -35382228 - HSATII Satellite Satellite -5 587 1 1068 131 3 5 chr10 104934557 104936735 -35380030 - HSATII Satellite Satellite -40 2172 1 1000 102 14 21 chr10 104936766 104937184 -35379581 - HSATII Satellite Satellite 0 415 1 1110 129 9 10 chr10 104937210 104939863 -35376902 - HSATII Satellite Satellite 0 2649 1 1110 121 15 6 chr10 104939889 104940371 -35376394 - HSATII Satellite Satellite 0 486 1 989 116 3 19 chr10 104940398 104940720 -35376045 - HSATII Satellite Satellite -17 316 1 1139 120 7 3 chr10 104940783 104941663 -35375102 - HSATII Satellite Satellite -12 883 1 761 139 13 0 chr10 104941699 104941857 -35374908 - HSATII Satellite Satellite -10 160 1 744 143 0 0 chr10 104941887 104942027 -35374738 - HSATII Satellite Satellite -14 156 17 1194 116 12 7 chr10 104942042 104942848 -35373917 - HSATII Satellite Satellite -99 809 1 991 122 18 10 chr10 104942879 104944102 -35372663 - HSATII Satellite Satellite 0 1232 1 183 132 44 29 chr10 104944112 104944180 -35372585 + (GAATG)n Satellite Satellite 2 70 0 1143 130 5 6 chr10 104944203 104945975 -35370790 - HSATII Satellite Satellite 0 1770 1 892 119 21 9 chr10 104946001 104946336 -35370429 - HSATII Satellite Satellite 0 339 1 980 125 7 16 chr10 104946366 104947798 -35368967 - HSATII Satellite Satellite -1 1420 1 1031 119 8 8 chr10 104947844 104948235 -35368530 - HSATII Satellite Satellite 0 391 1 1068 113 8 6 chr10 104948262 104948747 -35368018 - HSATII Satellite Satellite 0 485 1 950 127 3 19 chr10 104948774 104949096 -35367669 - HSATII Satellite Satellite -23 317 1 1151 111 11 3 chr10 104949159 104950036 -35366729 - HSATII Satellite Satellite -12 883 1 806 133 13 0 chr10 104950072 104950230 -35366535 - HSATII Satellite Satellite -10 160 1 744 143 0 0 chr10 104950260 104950400 -35366365 - HSATII Satellite Satellite -14 156 17 1248 115 12 7 chr10 104950415 104951221 -35365544 - HSATII Satellite Satellite -99 809 1 970 129 18 11 chr10 104951252 104952622 -35364143 - HSATII Satellite Satellite -5 1379 1 1098 128 3 5 chr10 104952633 104953768 -35362997 - HSATII Satellite Satellite 0 1132 1 1110 121 15 6 chr10 104953794 104954276 -35362489 - HSATII Satellite Satellite 0 486 1 1004 121 3 19 chr10 104954303 104954625 -35362140 - HSATII Satellite Satellite -23 317 1 1139 117 7 3 chr10 104954689 104955667 -35361098 - HSATII Satellite Satellite -12 981 1 761 139 13 0 chr10 104955703 104955861 -35360904 - HSATII Satellite Satellite -10 160 1 714 157 0 0 chr10 104955891 104956031 -35360734 - HSATII Satellite Satellite -14 156 17 1208 112 9 10 chr10 104956046 104956853 -35359912 - HSATII Satellite Satellite -1 806 1 1122 126 13 15 chr10 104956884 104958515 -35358250 - HSATII Satellite Satellite 0 1627 1 815 140 0 13 chr10 104958541 104958763 -35358002 - HSATII Satellite Satellite 0 219 1 1089 119 9 11 chr10 104958774 104960216 -35356549 - HSATII Satellite Satellite 0 1439 1 1214 127 13 7 chr10 104960243 104961980 -35354785 - HSATII Satellite Satellite -32 1747 1 519 112 0 0 chr10 104962099 104962188 -35354577 - HSATII Satellite Satellite -1 169 81 1000 102 14 21 chr10 104962219 104962637 -35354128 - HSATII Satellite Satellite 0 415 1 1238 123 10 12 chr10 104962663 104967143 -35349622 - HSATII Satellite Satellite -12 4470 1 879 138 21 5 chr10 104967171 104967745 -35349020 - HSATII Satellite Satellite -6 583 1 980 129 5 15 chr10 104967771 104969016 -35347749 - HSATII Satellite Satellite -1 1233 1 1043 116 8 8 chr10 104969062 104969453 -35347312 - HSATII Satellite Satellite 0 391 1 1128 124 8 12 chr10 104969480 104970419 -35346346 - HSATII Satellite Satellite -7 935 1 1142 128 8 9 chr10 104970448 104973146 -35343619 - HSATII Satellite Satellite -1 2695 1 1043 116 8 8 chr10 104973192 104973583 -35343182 - HSATII Satellite Satellite 0 391 1 911 116 12 9 chr10 104973610 104973896 -35342869 - HSATII Satellite Satellite -8 286 1 1080 101 0 0 chr10 104973926 104974095 -35342670 - HSATII Satellite Satellite 0 170 2 962 145 2 7 chr10 104974122 104974549 -35342216 - HSATII Satellite Satellite -30 425 1 887 135 12 0 chr10 104974578 104974833 -35341932 - HSATII Satellite Satellite -76 258 1 1142 122 6 6 chr10 104974856 104975403 -35341362 - HSATII Satellite Satellite -12 547 1 794 133 13 0 chr10 104975439 104975597 -35341168 - HSATII Satellite Satellite -10 160 1 756 143 0 0 chr10 104975627 104975767 -35340998 - HSATII Satellite Satellite -14 156 17 1248 116 12 7 chr10 104975786 104976588 -35340177 - HSATII Satellite Satellite -99 805 1 1110 124 12 8 chr10 104976619 104980148 -35336617 - HSATII Satellite Satellite 0 3543 1 968 121 3 18 chr10 104980175 104980497 -35336268 - HSATII Satellite Satellite -4 317 1 236 184 0 0 chr10 104980527 104980576 -35336189 - HSATII Satellite Satellite -46 124 76 341 291 39 10 chr10 105081250 105081353 -35235412 - MER5A DNA MER1_type -77 112 7 2247 112 0 0 chr10 105082046 105082342 -35234423 - AluSg1 SINE Alu -13 296 1 503 181 0 0 chr10 105082352 105082446 -35234319 - AluSx SINE Alu -7 302 209 1505 136 36 5 chr10 105082472 105082692 -35234073 - AluSx SINE Alu -85 227 1 180 200 22 22 chr10 105083178 105083223 -35233542 - MIR SINE MIR -108 154 110 420 313 207 5 chr10 105083304 105083521 -35233244 + MIR SINE MIR 2 262 0 233 132 0 38 chr10 105083693 105083746 -35233019 + (TATAA)n Simple_repeat Simple_repeat 1 51 0 346 298 9 9 chr10 105084231 105084345 -35232420 + GA-rich Low_complexity Low_complexity 2 115 0 508 300 91 35 chr10 105084869 105085099 -35231666 - MIR SINE MIR 0 262 20 229 291 99 13 chr10 105086017 105086168 -35230597 + L2 LINE L2 1254 1417 -1897 298 379 70 25 chr10 105086210 105086881 -35229884 + L2 LINE L2 1530 2230 -1084 410 293 83 54 chr10 105087260 105087332 -35229433 + MIR SINE MIR 2 70 -192 2397 95 3 0 chr10 105087332 105087628 -35229137 - AluSg SINE Alu -13 297 1 2302 118 0 0 chr10 105087628 105087924 -35228841 - AluSx SINE Alu -16 296 1 410 293 83 54 chr10 105087924 105088092 -35228673 + MIR SINE MIR 69 250 -12 515 280 34 23 chr10 105088295 105088470 -35228295 - MIR3 SINE MIR -29 179 3 180 77 0 0 chr10 105090044 105090070 -35226695 + (TCTCC)n Simple_repeat Simple_repeat 2 27 0 207 139 0 0 chr10 105090094 105090130 -35226635 + (TTC)n Simple_repeat Simple_repeat 1 36 0 267 310 20 16 chr10 105090253 105090459 -35226306 + CT-rich Low_complexity Low_complexity 1 206 0 200 296 19 0 chr10 105092188 105092242 -35224523 + GA-rich Low_complexity Low_complexity 5 59 0 421 230 22 72 chr10 105092509 105092648 -35224117 - MER94 DNA DNA -2 132 1 232 235 0 20 chr10 105093482 105093533 -35223232 - L2 LINE L2 -78 3235 3186 180 0 0 0 chr10 105093887 105093907 -35222858 + (T)n Simple_repeat Simple_repeat 1 20 0 499 275 84 11 chr10 105096038 105096216 -35220549 + MIR SINE MIR 2 192 -70 227 191 0 0 chr10 105098306 105098348 -35218417 + CT-rich Low_complexity Low_complexity 1 42 0 254 242 0 0 chr10 105099083 105099145 -35217620 + (CA)n Simple_repeat Simple_repeat 1 62 0 2217 136 7 0 chr10 105099323 105099632 -35217133 - AluSq SINE Alu -2 311 1 261 180 0 0 chr10 105101569 105101619 -35215146 + (TG)n Simple_repeat Simple_repeat 2 51 0 240 265 0 0 chr10 105102927 105102976 -35213789 + polypyrimidine Low_complexity Low_complexity 2 50 0 188 348 34 11 chr10 105104326 105104415 -35212350 - L3 LINE CR1 -34 1543 1453 407 327 32 6 chr10 105104486 105104642 -35212123 + MIR SINE MIR 20 179 -83 1473 266 42 29 chr10 105104763 105105210 -35211555 - L3 LINE CR1 -394 1183 731 22 0 0 0 chr10 105105426 105105448 -35211317 + AT_rich Low_complexity Low_complexity 1 22 0 321 292 108 8 chr10 105105469 105105599 -35211166 - L2 LINE L2 -23 3249 3107 819 228 109 26 chr10 105106348 105106659 -35210106 - L1ME4a LINE L1 -4 6117 5781 236 249 58 66 chr10 105107068 105107218 -35209547 + MIR SINE MIR 37 183 -25 323 244 0 58 chr10 105107478 105107564 -35209201 + MIR SINE MIR 51 131 -131 862 263 59 13 chr10 105107564 105107800 -35208965 + MIR SINE MIR 16 262 0 193 256 98 24 chr10 105107801 105107883 -35208882 + MIR SINE MIR 175 262 0 2126 136 0 13 chr10 105108333 105108643 -35208122 - AluJb SINE Alu -6 306 1 319 316 32 19 chr10 105108800 105108958 -35207807 + CT-rich Low_complexity Low_complexity 4 163 0 492 304 68 13 chr10 105109531 105109732 -35207033 + MIR SINE MIR 43 255 -7 496 296 113 13 chr10 105109753 105109983 -35206782 + MIR SINE MIR 3 255 -7 2201 97 34 10 chr10 105110014 105110312 -35206453 - AluSg SINE Alu -5 305 1 1998 147 16 0 chr10 105110491 105110797 -35205968 - AluJo SINE Alu -1 311 1 335 308 68 8 chr10 105111099 105111232 -35205533 - L1ME4a LINE L1 -9 6112 5972 320 292 20 16 chr10 105111433 105111583 -35205182 + MIR SINE MIR 102 247 -15 259 262 107 49 chr10 105111740 105111862 -35204903 + MIR3 SINE MIR 41 169 -39 774 265 83 4 chr10 105112034 105112264 -35204501 + MIR SINE MIR 13 260 -2 249 242 15 30 chr10 105113279 105113345 -35203420 + CT-rich Low_complexity Low_complexity 1 65 0 263 274 6 60 chr10 105113487 105113655 -35203110 + CT-rich Low_complexity Low_complexity 3 161 0 236 240 16 78 chr10 105113937 105114066 -35202699 + CT-rich Low_complexity Low_complexity 3 123 0 25 0 0 0 chr10 105114110 105114135 -35202630 + AT_rich Low_complexity Low_complexity 1 25 0 282 29 0 0 chr10 105114496 105114531 -35202234 + (CA)n Simple_repeat Simple_repeat 2 36 0 534 91 0 0 chr10 105115170 105115247 -35201518 + (TC)n Simple_repeat Simple_repeat 2 78 0 402 21 0 0 chr10 105115247 105115294 -35201471 + (CA)n Simple_repeat Simple_repeat 1 47 0 433 252 35 9 chr10 105117048 105117163 -35199602 + MIR3 SINE MIR 84 201 -7 202 182 0 0 chr10 105117998 105118031 -35198734 + (CACG)n Simple_repeat Simple_repeat 4 36 0 1298 147 22 4 chr10 105123137 105123362 -35193403 + MER30 DNA MER1_type 2 230 0 360 304 115 60 chr10 105123698 105124263 -35192502 + L1MEd LINE L1 242 837 -5282 2549 65 0 13 chr10 105124281 105124591 -35192174 + AluY SINE Alu 1 306 -5 438 239 18 18 chr10 105127464 105127573 -35189192 + MIR3 SINE MIR 93 201 -7 545 243 13 124 chr10 105129091 105129183 -35187582 + MIR SINE MIR 57 158 -104 2264 99 3 3 chr10 105129183 105129477 -35187288 + AluSx SINE Alu 1 294 -18 545 243 13 124 chr10 105129477 105129504 -35187261 + MIR SINE MIR 158 186 -76 2278 119 0 3 chr10 105129504 105129814 -35186951 + AluSq SINE Alu 1 309 -4 545 243 13 124 chr10 105129814 105129919 -35186846 + MIR SINE MIR 186 257 -5 298 348 78 0 chr10 105130500 105130639 -35186126 + MIR SINE MIR 45 187 -21 2313 103 17 0 chr10 105130654 105130954 -35185811 + AluSx SINE Alu 1 305 -7 261 259 204 9 chr10 105132684 105132792 -35183973 - L2 LINE L2 -6 3307 3179 303 388 48 14 chr10 105133127 105133418 -35183347 - L2 LINE L2 -574 2740 2440 501 58 0 0 chr10 105134571 105134640 -35182125 + (CA)n Simple_repeat Simple_repeat 2 70 0 25 65 0 0 chr10 105138058 105138104 -35178661 + GC_rich Low_complexity Low_complexity 1 46 0 207 88 29 0 chr10 105139134 105139168 -35177597 + (CCCCG)n Simple_repeat Simple_repeat 1 35 0 216 204 10 20 chr10 105139447 105139545 -35177220 + CT-rich Low_complexity Low_complexity 1 97 0 35 78 0 0 chr10 105139614 105139691 -35177074 + GC_rich Low_complexity Low_complexity 1 77 0 29 28 0 0 chr10 105140122 105140158 -35176607 + AT_rich Low_complexity Low_complexity 1 36 0 494 211 81 43 chr10 105141607 105141768 -35174997 - Charlie7 DNA MER1_type -1 2611 2445 424 193 80 0 chr10 105141773 105141861 -35174904 - Charlie7 DNA MER1_type -2513 99 5 1206 275 69 11 chr10 105142868 105143246 -35173519 + L2 LINE L2 2387 2786 -528 657 299 113 73 chr10 105143546 105143896 -35172869 + MLT1K LTR MaLR 58 436 -152 201 39 0 0 chr10 105143896 105143922 -35172843 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 657 299 113 73 chr10 105143922 105144076 -35172689 + MLT1K LTR MaLR 436 582 -6 260 310 45 70 chr10 105144107 105144307 -35172458 - L2 LINE L2 -527 2787 2593 417 254 116 22 chr10 105145588 105145726 -35171039 + MIR3 SINE MIR 58 208 0 641 238 112 36 chr10 105146996 105147219 -35169546 - MIR SINE MIR -3 259 20 23 0 0 0 chr10 105147448 105147471 -35169294 + AT_rich Low_complexity Low_complexity 1 23 0 421 296 117 58 chr10 105147471 105147762 -35169003 + L1MC4a LINE L1 6045 6352 -1456 1609 214 26 61 chr10 105147804 105148402 -35168363 + L1MC5 LINE L1 6499 6972 -836 559 134 0 0 chr10 105148413 105148539 -35168226 + AluSg/x SINE Alu 197 322 0 1107 223 146 55 chr10 105148549 105149110 -35167655 + L1MC5 LINE L1 7300 7911 -50 580 302 65 52 chr10 105149160 105149468 -35167297 + HAL1 LINE L1 583 894 -1613 2270 107 0 0 chr10 105149468 105149759 -35167006 + AluSx SINE Alu 1 291 -21 1066 157 25 0 chr10 105149903 105150062 -35166703 + AluSg/x SINE Alu 133 295 -15 362 251 21 144 chr10 105150062 105150182 -35166583 + HAL1 LINE L1 918 1009 -1498 2296 105 0 3 chr10 105150182 105150486 -35166279 - AluSg SINE Alu -7 303 1 362 251 21 144 chr10 105150486 105150552 -35166213 + HAL1 LINE L1 1009 1081 -1426 315 222 9 37 chr10 105150592 105150700 -35166065 + HAL1 LINE L1 2293 2397 -110 441 94 16 0 chr10 105150756 105150820 -35165945 + Tigger2 DNA MER2_type 1 65 -2653 * 2631 117 5 3 chr10 105150814 105151206 -35165559 + Tigger2 DNA MER2_type 2273 2665 -53 5304 88 11 5 chr10 105151214 105151995 -35164770 - L1PB1 LINE L1 -1 6150 5365 343 247 14 0 chr10 105151995 105152068 -35164697 + Tigger2 DNA MER2_type 2635 2708 -10 1585 158 4 4 chr10 105152091 105152338 -35164427 - AluJo SINE Alu -65 247 1 23 33 0 0 chr10 105152341 105152371 -35164394 + AT_rich Low_complexity Low_complexity 1 30 0 2162 104 26 10 chr10 105152371 105152679 -35164086 - AluSq SINE Alu 0 313 1 263 250 42 17 chr10 105152684 105152804 -35163961 - L1MC5 LINE L1 -32 7929 7807 32 67 0 0 chr10 105152814 105152874 -35163891 + AT_rich Low_complexity Low_complexity 1 60 0 387 242 84 0 chr10 105152976 105153071 -35163694 - MIR SINE MIR -32 230 128 1031 198 99 25 chr10 105153123 105153365 -35163400 - AluJo SINE Alu -9 303 44 1138 113 0 0 chr10 105153596 105153738 -35163027 + AluSq/x SINE Alu 1 142 -171 1836 102 8 0 chr10 105153744 105154018 -35162747 + AluSg SINE Alu 45 320 0 1764 328 94 17 chr10 105154023 105154917 -35161848 - L3 LINE CR1 -403 1174 212 460 279 55 48 chr10 105155063 105155393 -35161372 + L1ME4a LINE L1 5790 6121 0 255 254 132 26 chr10 105155752 105155866 -35160899 - MIR SINE MIR -118 144 19 1921 157 17 3 chr10 105156070 105156370 -35160395 - AluJo SINE Alu 0 312 9 498 308 88 16 chr10 105156784 105156966 -35159799 - MIR SINE MIR -59 203 9 180 77 0 0 chr10 105157053 105157079 -35159686 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 2454 73 33 0 chr10 105157084 105157385 -35159380 - AluSp SINE Alu -2 311 1 754 348 103 16 chr10 105157422 105158132 -35158633 + L2 LINE L2 1587 2358 -956 657 217 0 0 chr10 105158296 105158416 -35158349 - FLAM_A SINE Alu -13 120 1 36 0 0 0 chr10 105158629 105158665 -35158100 + AT_rich Low_complexity Low_complexity 1 36 0 872 143 0 0 chr10 105158671 105158804 -35157961 - FLAM_C SINE Alu 0 133 1 378 312 58 19 chr10 105158821 105158975 -35157790 - MIR SINE MIR -73 189 30 243 0 0 0 chr10 105158976 105159003 -35157762 + (CA)n Simple_repeat Simple_repeat 1 27 0 2365 103 0 0 chr10 105159226 105159526 -35157239 - AluSx SINE Alu -7 305 6 311 306 28 37 chr10 105159549 105159657 -35157108 - L2 LINE L2 -35 3278 3172 715 352 115 5 chr10 105159737 105160112 -35156653 + L3 LINE CR1 554 969 -608 278 289 48 29 chr10 105160277 105160381 -35156384 - MIR3 SINE MIR -44 164 59 526 187 45 22 chr10 105161504 105161638 -35155127 - MER91C DNA MER1_type -3 137 1 2177 183 75 27 chr10 105162114 105162564 -35154201 - MLT1D LTR MaLR -2 503 27 2080 142 75 50 chr10 105162564 105162980 -35153785 + MSTB LTR MaLR 1 426 0 2177 183 75 27 chr10 105162980 105163009 -35153756 - MLT1D LTR MaLR -478 27 1 732 264 87 45 chr10 105163283 105163460 -35153305 + LTR16C LTR ERVL 168 365 -126 2524 54 0 38 chr10 105163460 105163773 -35152992 - AluY SINE Alu -10 301 1 732 264 87 45 chr10 105163773 105163906 -35152859 + LTR16C LTR ERVL 365 491 0 249 200 0 33 chr10 105164164 105164224 -35152541 + L2 LINE L2 2303 2360 -954 526 297 107 36 chr10 105164253 105164637 -35152128 + L2 LINE L2 2031 2441 -873 2337 82 4 0 chr10 105164735 105165042 -35151723 - AluSx SINE Alu 0 308 1 258 350 143 14 chr10 105165185 105165479 -35151286 + L2 LINE L2 2941 3272 0 222 222 0 0 chr10 105165890 105165935 -35150830 + CT-rich Low_complexity Low_complexity 2 46 0 195 114 0 0 chr10 105166128 105166163 -35150602 + (TCTCC)n Simple_repeat Simple_repeat 5 39 0 347 363 103 26 chr10 105166587 105166719 -35150046 - L2 LINE L2 -24 3248 3128 1641 164 24 70 chr10 105166719 105167102 -35149663 - MLT1A1 LTR MaLR 0 365 1 347 363 103 26 chr10 105167102 105167199 -35149566 - L2 LINE L2 -144 3128 3040 2025 148 3 0 chr10 105167199 105167489 -35149276 + AluJo SINE Alu 1 291 -21 347 363 103 26 chr10 105167489 105167569 -35149196 - L2 LINE L2 -232 3040 2914 2060 144 0 7 chr10 105167708 105168007 -35148758 - AluSx SINE Alu -13 299 3 284 289 132 25 chr10 105168373 105168494 -35148271 + L2 LINE L2 3133 3266 -6 633 314 104 37 chr10 105168508 105169027 -35147738 + L2 LINE L2 2254 2807 -507 265 299 112 53 chr10 105169369 105169556 -35147209 + L2 LINE L2 3075 3272 0 2280 115 0 3 chr10 105169604 105169909 -35146856 + AluSx SINE Alu 1 304 -8 396 0 0 0 chr10 105170743 105170787 -35145978 + (CA)n Simple_repeat Simple_repeat 2 45 0 226 236 0 36 chr10 105171032 105171087 -35145678 + (CACG)n Simple_repeat Simple_repeat 3 55 0 201 217 0 43 chr10 105172490 105172559 -35144206 + (TCTCTG)n Simple_repeat Simple_repeat 2 67 0 284 198 27 54 chr10 105173280 105173391 -35143374 + (CAGAGA)n Simple_repeat Simple_repeat 2 109 0 368 266 83 70 chr10 105174316 105174419 -35142346 - MIR SINE MIR -1 261 161 1813 144 57 13 chr10 105174419 105174717 -35142048 + AluJb SINE Alu 1 311 -1 368 266 83 70 chr10 105174717 105174866 -35141899 - MIR SINE MIR -101 161 9 237 61 0 0 chr10 105176752 105176762 -35140003 + (GA)n Simple_repeat Simple_repeat 2 11 -23 2290 110 0 10 chr10 105176762 105177070 -35139695 + AluSx SINE Alu 1 305 -7 237 61 0 0 chr10 105177070 105177092 -35139673 + (GA)n Simple_repeat Simple_repeat 10 34 0 243 146 0 0 chr10 105177538 105177579 -35139186 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 288 0 0 0 chr10 105181139 105181171 -35135594 + (CA)n Simple_repeat Simple_repeat 2 33 0 643 242 129 15 chr10 105181295 105181513 -35135252 + MIR SINE MIR 16 256 -6 684 249 23 23 chr10 105184918 105185095 -35131670 + MIR3 SINE MIR 27 203 -5 510 216 23 82 chr10 105187376 105187416 -35129349 - MIR3 SINE MIR 0 208 167 1258 156 15 104 chr10 105187416 105187742 -35129023 - AluSg1 SINE Alu -12 297 1 510 216 23 82 chr10 105187742 105187872 -35128893 - MIR3 SINE MIR -41 167 48 266 281 11 34 chr10 105188323 105188412 -35128353 - MIR SINE MIR -5 257 171 806 205 43 6 chr10 105188423 105188584 -35128181 - MIR SINE MIR -60 202 36 243 173 0 0 chr10 105189239 105189291 -35127474 + G-rich Low_complexity Low_complexity 1 52 0 309 287 119 45 chr10 105190167 105190369 -35126396 - L1M4 LINE L1 -2824 3322 3082 536 129 0 11 chr10 105190516 105190609 -35126156 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 2021 135 10 7 chr10 105190609 105190906 -35125859 - AluSx SINE Alu -14 298 1 265 303 106 46 chr10 105191552 105191836 -35124929 + L2 LINE L2 2227 2527 -787 291 313 91 35 chr10 105191995 105192225 -35124540 + L2 LINE L2 2596 2838 -476 552 291 213 32 chr10 105192645 105193020 -35123745 - L2 LINE L2 0 3272 2830 409 291 38 29 chr10 105193205 105193415 -35123350 - L2 LINE L2 -705 2609 2398 201 241 0 17 chr10 105193854 105193912 -35122853 + C-rich Low_complexity Low_complexity 1 57 0 202 197 14 56 chr10 105194032 105194103 -35122662 + G-rich Low_complexity Low_complexity 1 68 0 2571 81 0 0 chr10 105195261 105195570 -35121195 + AluSc SINE Alu 1 309 0 1721 192 7 10 chr10 105195650 105195947 -35120818 - AluJb SINE Alu -16 296 1 2290 92 0 30 chr10 105196163 105196466 -35120299 - AluY SINE Alu -17 294 1 218 313 16 0 chr10 105196486 105196550 -35120215 - MIR SINE MIR -112 150 86 1706 212 58 26 chr10 105198076 105198505 -35118260 - LTR47B LTR ERVL 0 443 1 1643 192 30 30 chr10 105198788 105199090 -35117675 + AluJo SINE Alu 1 302 -10 374 350 56 11 chr10 105199575 105199755 -35117010 + MIR SINE MIR 50 237 -25 214 147 0 0 chr10 105200231 105200265 -35116500 + (TGGG)n Simple_repeat Simple_repeat 4 37 0 204 271 0 0 chr10 105201588 105201636 -35115129 + G-rich Low_complexity Low_complexity 5 52 0 1941 204 30 71 chr10 105202120 105202370 -35114395 - L1ME3 LINE L1 -2 6160 5901 2459 83 0 26 chr10 105202370 105202683 -35114082 + AluY SINE Alu 1 305 -6 1941 204 30 71 chr10 105202683 105202934 -35113831 - L1ME3 LINE L1 -261 5901 5682 993 188 6 6 chr10 105202934 105203104 -35113661 - FAM SINE Alu -4 171 2 1941 204 30 71 chr10 105203104 105203166 -35113599 - L1ME3 LINE L1 -480 5682 5619 387 214 122 0 chr10 105203192 105203290 -35113475 + L2 LINE L2 3203 3312 -1 1117 284 50 27 chr10 105203292 105204368 -35112397 + L1MC4a LINE L1 4540 5640 -522 516 72 0 0 chr10 105204401 105204470 -35112295 + (CA)n Simple_repeat Simple_repeat 2 70 0 650 232 0 0 chr10 105204580 105204705 -35112060 + MER63A DNA MER1_type 49 173 -37 368 214 97 107 chr10 105204737 105204791 -35111974 + L1MC4a LINE L1 5765 5818 -1990 1914 163 0 13 chr10 105204791 105205092 -35111673 + AluJb SINE Alu 1 297 -15 368 214 97 107 chr10 105205092 105205243 -35111522 + L1MC4a LINE L1 5818 5968 -1840 197 337 48 12 chr10 105205376 105205459 -35111306 - L2 LINE L2 -12 3260 3175 1950 153 0 14 chr10 105205514 105205809 -35110956 - AluSx SINE Alu -19 293 3 287 104 21 0 chr10 105206370 105206418 -35110347 + (TC)n Simple_repeat Simple_repeat 1 49 0 2165 111 0 36 chr10 105206832 105207139 -35109626 - AluSx SINE Alu -16 296 1 207 114 0 0 chr10 105207237 105207272 -35109493 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1814 160 14 14 chr10 105207274 105207556 -35109209 - AluJo SINE Alu -30 282 1 277 250 106 27 chr10 105207993 105208181 -35108584 - L1ME4a LINE L1 0 6121 5919 78 22 0 0 chr10 105208184 105208276 -35108489 + AT_rich Low_complexity Low_complexity 1 92 0 21 71 0 0 chr10 105208400 105208442 -35108323 + AT_rich Low_complexity Low_complexity 1 42 0 299 283 34 34 chr10 105209096 105209273 -35107492 - L1M4 LINE L1 -3292 2854 2678 2420 94 0 0 chr10 105209506 105209804 -35106961 + AluSq SINE Alu 2 299 -14 360 288 16 82 chr10 105209980 105210083 -35106682 - L1MC4a LINE L1 -1897 5911 5803 2065 129 3 13 chr10 105210083 105210385 -35106380 - AluSq SINE Alu -14 299 1 360 288 16 82 chr10 105210385 105210538 -35106227 - L1MC4a LINE L1 -2005 5803 5672 2344 76 21 0 chr10 105211026 105211317 -35105448 - AluSq SINE Alu -16 297 1 206 203 51 51 chr10 105212749 105212808 -35103957 - MIR SINE MIR -1 261 203 1439 154 51 8 chr10 105212809 105213043 -35103722 - AluJo SINE Alu -30 282 39 887 203 115 10 chr10 105213045 105213237 -35103528 - MIR SINE MIR -49 213 2 1955 133 32 3 chr10 105213238 105213523 -35103242 - AluJb SINE Alu -2 310 18 180 233 167 11 chr10 105213568 105213658 -35103107 - L2 LINE L2 -83 3230 3127 233 288 43 58 chr10 105213755 105213894 -35102871 - L2 LINE L2 -327 2945 2809 217 132 0 0 chr10 105213940 105213978 -35102787 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 321 398 17 0 chr10 105213994 105214175 -35102590 - L2 LINE L2 -578 2736 2553 855 255 62 60 chr10 105214176 105214234 -35102531 + L1MC/D LINE L1 5257 5313 -857 2298 98 0 3 chr10 105214234 105214530 -35102235 + AluY SINE Alu 1 295 -16 855 255 62 60 chr10 105214530 105215005 -35101760 + L1MC/D LINE L1 5313 5791 -379 384 262 33 109 chr10 105215345 105215555 -35101210 - L2 LINE L2 -791 2523 2330 640 242 82 18 chr10 105215979 105216198 -35100567 + L1MC/D LINE L1 5583 5815 -1993 2060 155 0 0 chr10 105216207 105216511 -35100254 + AluSx SINE Alu 1 304 -8 1718 149 83 3 chr10 105216520 105216808 -35099957 + AluJb SINE Alu 2 312 0 2145 108 11 0 chr10 105216937 105217247 -35099518 - AluSx SINE Alu 0 313 1 228 214 54 0 chr10 105217247 105217303 -35099462 - L1MC/D LINE L1 -1916 5892 5834 197 159 159 0 chr10 105217332 105217376 -35099389 - MIR SINE MIR -26 236 186 2252 120 0 0 chr10 105217396 105217697 -35099068 + AluSx SINE Alu 1 301 -11 565 76 17 3 chr10 105217700 105217788 -35098977 - HY3 scRNA scRNA -1 100 16 663 249 18 30 chr10 105217794 105217963 -35098802 - MIR SINE MIR -82 180 14 741 250 53 20 chr10 105217986 105218230 -35098535 - L1MC4a LINE L1 -1976 5832 5581 317 186 120 11 chr10 105218538 105218646 -35098119 + Charlie8 DNA MER1_type 159 290 -2127 475 255 10 0 chr10 105218712 105218814 -35097951 + MIR SINE MIR 159 261 -1 233 217 0 0 chr10 105218874 105218920 -35097845 + Charlie8 DNA MER1_type 1354 1399 -1018 321 118 0 0 chr10 105218948 105218999 -35097766 - Charlie8 DNA MER1_type -2280 137 87 1667 173 4 0 chr10 105219022 105219282 -35097483 + AluJo SINE Alu 1 261 -51 483 246 63 63 chr10 105219333 105219585 -35097180 + MER112 DNA MER1_type 1 252 -8 612 230 56 14 chr10 105219748 105219961 -35096804 - MER113 DNA MER1_type? -295 226 5 797 168 0 0 chr10 105222149 105222274 -35094491 - FLAM_C SINE Alu -8 125 1 209 340 57 14 chr10 105222503 105222644 -35094121 - MIR SINE MIR -6 256 110 605 265 37 32 chr10 105223892 105223986 -35092779 - MIR SINE MIR -10 252 160 1721 128 4 8 chr10 105223986 105224236 -35092529 - AluSx SINE Alu -63 249 1 605 265 37 32 chr10 105224236 105224330 -35092435 - MIR SINE MIR -102 160 63 588 258 81 11 chr10 105224516 105224702 -35092063 + MIR SINE MIR 10 208 -54 2264 96 0 0 chr10 105225453 105225734 -35091031 + AluSg SINE Alu 9 289 -21 822 287 44 77 chr10 105225770 105226329 -35090436 - L1MC4a LINE L1 -1940 5868 5332 2071 142 3 0 chr10 105226329 105226631 -35090134 - AluSx SINE Alu -7 305 3 822 287 44 77 chr10 105226631 105226704 -35090061 - L1MC4a LINE L1 -2476 5332 5258 814 155 14 34 chr10 105226723 105226871 -35089894 + AluJo SINE Alu 1 145 -167 206 312 23 23 chr10 105227570 105227743 -35089022 + CT-rich Low_complexity Low_complexity 2 174 0 23 0 0 0 chr10 105228018 105228041 -35088724 + GC_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr10 105228291 105228330 -35088435 + GC_rich Low_complexity Low_complexity 1 39 0 192 77 0 0 chr10 105228396 105228422 -35088343 + (CGG)n Simple_repeat Simple_repeat 2 27 0 23 54 0 0 chr10 105228631 105228668 -35088097 + GC_rich Low_complexity Low_complexity 1 37 0 1943 161 0 3 chr10 105229787 105230085 -35086680 - AluJb SINE Alu -14 298 2 1567 109 56 115 chr10 105230097 105230401 -35086364 - AluJb SINE Alu -11 301 16 300 276 144 43 chr10 105230433 105230871 -35085894 - L1MC4a LINE L1 -1164 4982 4501 588 293 59 5 chr10 105230891 105231113 -35085652 - L1ME LINE L1 -304 5817 5584 2231 109 10 3 chr10 105231274 105231577 -35085188 - AluSx SINE Alu -7 305 1 201 39 0 0 chr10 105232170 105232196 -35084569 + (TG)n Simple_repeat Simple_repeat 2 27 0 1771 191 10 0 chr10 105233414 105233717 -35083048 - AluJo SINE Alu -6 306 1 353 259 0 0 chr10 105239385 105239466 -35077299 + L2 LINE L2 3229 3309 -4 316 165 45 0 chr10 105239976 105240043 -35076722 + MIR SINE MIR 105 173 -62 306 50 0 0 chr10 105240786 105240826 -35075939 + (TTTTA)n Simple_repeat Simple_repeat 5 44 0 657 264 60 0 chr10 105241062 105241244 -35075521 - AluJo SINE Alu -13 299 107 2619 147 8 17 chr10 105241244 105241712 -35075053 - L1MB7 LINE L1 -27 6157 5694 198 264 144 24 chr10 105241715 105241840 -35074925 + MIR SINE MIR 120 259 -3 2522 82 0 0 chr10 105242009 105242314 -35074451 - AluY SINE Alu -6 305 1 199 226 97 32 chr10 105242524 105242586 -35074179 + MIR SINE MIR 124 189 -73 * 733 155 91 53 chr10 105242583 105242770 -35073995 + L2 LINE L2 3115 3308 -5 921 164 0 0 chr10 105243562 105243702 -35073063 - FLAM_A SINE Alu -1 141 2 2381 90 0 7 chr10 105243740 105244040 -35072725 - AluSx SINE Alu -12 300 3 632 326 101 58 chr10 105244040 105244430 -35072335 - L1M4 LINE L1 -1372 4774 4402 189 0 0 0 chr10 105244430 105244451 -35072314 + (TTA)n Simple_repeat Simple_repeat 1 21 0 1744 137 49 21 chr10 105244453 105244738 -35072027 - AluJb SINE Alu -16 296 4 632 326 101 58 chr10 105244738 105244841 -35071924 - L1M4 LINE L1 -1744 4402 4257 411 261 138 31 chr10 105244850 105244991 -35071774 - L1MC4 LINE L1 -2 8040 7915 1847 145 32 0 chr10 105244991 105245113 -35071652 + AluJb SINE Alu 1 118 -194 220 27 54 0 chr10 105245113 105245150 -35071615 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1847 145 32 0 chr10 105245150 105245309 -35071456 + AluJb SINE Alu 118 291 -21 411 261 138 31 chr10 105245309 105245485 -35071280 - L1MC4 LINE L1 -127 7915 7689 1856 151 18 0 chr10 105245485 105245770 -35070995 - AluSc SINE Alu -17 292 3 241 236 0 0 chr10 105245776 105245831 -35070934 - FAM SINE Alu -9 170 116 26 0 0 0 chr10 105245892 105245918 -35070847 + AT_rich Low_complexity Low_complexity 1 26 0 1675 97 25 0 chr10 105246304 105246542 -35070223 - AluSx SINE Alu -68 244 1 186 400 33 0 chr10 105246571 105246661 -35070104 - MIR SINE MIR -148 114 22 425 304 0 43 chr10 105247926 105248064 -35068701 + MIR3 SINE MIR 25 156 -52 273 29 0 0 chr10 105248284 105248318 -35068447 + (TG)n Simple_repeat Simple_repeat 2 35 0 2208 108 0 7 chr10 105248966 105249318 -35067447 - AluSq SINE Alu 0 350 1 693 225 6 0 chr10 105249408 105249568 -35067197 + FRAM SINE Alu 1 40 0 2108 122 14 0 chr10 105249761 105250047 -35066718 - AluSc SINE Alu -19 290 1 445 226 38 0 chr10 105250051 105250157 -35066608 - FRAM SINE Alu -17 159 50 455 138 0 0 chr10 105250192 105250257 -35066508 + AluS SINE Alu 2 66 -247 1217 119 7 1 chr10 105250262 105250465 -35066300 - L1PA16 LINE L1 -179 5987 5783 275 288 71 11 chr10 105250436 105250620 -35066145 - L1M4 LINE L1 -2349 3797 3603 * 841 292 101 71 chr10 105250621 105251103 -35065662 - L1MCa LINE L1 -1267 5159 4693 1988 150 27 0 chr10 105251103 105251396 -35065369 - AluSx SINE Alu -11 301 1 841 292 101 71 chr10 105251396 105251774 -35064991 - L1MCa LINE L1 -1733 4693 2259 825 285 96 111 chr10 105251919 105252091 -35064674 - L1MCa LINE L1 -815 1972 1799 1984 129 77 0 chr10 105252091 105252378 -35064387 - AluSx SINE Alu -3 309 1 825 285 96 111 chr10 105252378 105253078 -35063687 - L1MCa LINE L1 -988 1799 1250 940 177 13 0 chr10 105253081 105253239 -35063526 + FRAM SINE Alu 1 157 -19 1822 176 6 13 chr10 105253307 105253620 -35063145 - AluJb SINE Alu -1 311 1 1802 250 31 58 chr10 105254040 105254258 -35062507 + MLT2E LTR ERVL 2 224 -404 1706 167 3 17 chr10 105254258 105254565 -35062200 - AluJb SINE Alu 0 303 1 1802 250 31 58 chr10 105254565 105254988 -35061777 + MLT2E LTR ERVL 224 627 -1 405 250 0 43 chr10 105254988 105255104 -35061661 + MLT1J LTR MaLR 359 469 -42 2217 136 3 0 chr10 105255434 105255744 -35061021 - AluSx SINE Alu 0 312 2 2162 117 0 0 chr10 105255756 105256078 -35060687 - AluSx SINE Alu 0 322 1 700 72 10 0 chr10 105256474 105256571 -35060194 - AluSp/q SINE Alu -51 262 165 493 296 21 26 chr10 105256580 105256769 -35059996 - MER91B DNA MER1_type -2 188 1 290 225 115 84 chr10 105256959 105257150 -35059615 - LTR67 LTR ERVL 0 557 361 1991 106 3 66 chr10 105257368 105257669 -35059096 + AluSx SINE Alu 1 282 -30 722 116 9 0 chr10 105257795 105257907 -35058858 - AluSp/q SINE Alu -31 282 170 402 230 0 0 chr10 105257909 105257983 -35058782 + L1MC/D LINE L1 5569 5642 -702 252 0 0 0 chr10 105257985 105258013 -35058752 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2420 101 0 0 chr10 105258079 105258377 -35058388 - AluSx SINE Alu -14 298 1 4417 154 36 14 chr10 105258379 105259208 -35057557 - L1MC1 LINE L1 -3 6330 5484 1982 138 7 3 chr10 105259280 105259584 -35057181 + AluSx SINE Alu 1 305 0 686 144 0 0 chr10 105260076 105260180 -35056585 + AluJb SINE Alu 49 152 -160 975 225 131 79 chr10 105260230 105260749 -35056016 - LTR1B LTR ERV1 -219 607 62 994 164 13 0 chr10 105260785 105260937 -35055828 + AluJb SINE Alu 152 305 -7 1094 215 11 38 chr10 105261074 105261334 -35055431 + MER74A LTR ERVL 2 254 -304 3310 108 14 0 chr10 105261334 105261823 -35054942 + MER41B LTR ERV1 1 496 -139 667 233 69 25 chr10 105261832 105262034 -35054731 - LTR7 LTR ERV1 -2 448 238 897 150 24 26 chr10 105262142 105262351 -35054414 - LTR7 LTR ERV1 -189 261 1 3220 112 25 37 chr10 105262352 105262915 -35053850 - HERVH LTR ERV1 -1 7712 7157 * 13914 125 5 4 chr10 105262908 105265186 -35051579 - HERVH LTR ERV1 -1697 6016 3800 9221 133 1 16 chr10 105265174 105266485 -35050280 - HERVH LTR ERV1 -4126 3587 2301 * 2348 84 0 19 chr10 105266485 105266793 -35049972 + AluY SINE Alu 1 302 -9 9221 133 1 16 chr10 105266793 105266998 -35049767 - HERVH LTR ERV1 -5412 2301 2094 481 135 0 0 chr10 105266998 105267072 -35049693 - AluS SINE Alu -235 75 2 489 167 0 11 chr10 105267072 105267162 -35049603 + MER74B LTR ERVL 534 622 0 2493 90 0 0 chr10 105268695 105269005 -35047760 - AluSx SINE Alu 0 312 3 717 238 79 25 chr10 105269505 105269707 -35047058 - MIR SINE MIR -8 254 42 1632 144 4 0 chr10 105269708 105269937 -35046828 + AluSq SINE Alu 1 230 -83 1610 171 10 45 chr10 105270580 105270889 -35045876 - AluJb SINE Alu -14 298 1 830 165 0 0 chr10 105270930 105271051 -35045714 - FLAM_C SINE Alu -22 121 1 2258 114 0 0 chr10 105271063 105271361 -35045404 - AluSx SINE Alu -14 298 1 234 227 0 80 chr10 105271366 105271441 -35045324 - MER5A DNA MER1_type -118 71 3 414 0 0 0 chr10 105271693 105271739 -35045026 + (TG)n Simple_repeat Simple_repeat 2 47 0 314 238 175 8 chr10 105272022 105272148 -35044617 + MIR SINE MIR 31 177 -85 2440 191 72 98 chr10 105272156 105272766 -35043999 + L1MC4 LINE L1 7169 7793 -249 2357 107 0 7 chr10 105272766 105273074 -35043691 - AluSx SINE Alu -6 306 1 2440 191 72 98 chr10 105273074 105273107 -35043658 + L1MC4 LINE L1 7793 7825 -217 1518 162 7 71 chr10 105273107 105273403 -35043362 + AluJb SINE Alu 1 277 -35 207 0 0 0 chr10 105273406 105273429 -35043336 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2440 191 72 98 chr10 105273429 105273677 -35043088 + L1MC4 LINE L1 7827 8042 0 259 290 127 69 chr10 105275006 105275399 -35041366 + MLT1K LTR MaLR 146 561 -27 2282 96 0 0 chr10 105275553 105275858 -35040907 - AluSx SINE Alu 0 305 1 2345 105 0 0 chr10 105276199 105276494 -35040271 - AluSq SINE Alu -18 295 1 4601 81 4 25 chr10 105276887 105277368 -35039397 + L1MA3 LINE L1 5353 5842 -463 1986 152 10 0 chr10 105277368 105277664 -35039101 + AluSx SINE Alu 1 299 -13 4601 81 4 25 chr10 105277664 105277748 -35039017 + L1MA3 LINE L1 5842 5926 -379 2311 118 0 3 chr10 105277748 105278054 -35038711 + AluSx SINE Alu 1 305 -7 4601 81 4 25 chr10 105278054 105278167 -35038598 + L1MA3 LINE L1 5926 6018 -287 240 35 0 0 chr10 105282720 105282749 -35034016 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1798 137 0 15 chr10 105282753 105283023 -35033742 - AluJb SINE Alu -44 268 3 292 181 22 84 chr10 105283025 105283153 -35033612 - AluJ/FRAM SINE Alu -20 282 222 626 67 0 22 chr10 105283379 105283468 -35033297 + AluSc SINE Alu 203 289 -20 244 157 0 0 chr10 105283965 105284016 -35032749 + L1MA8 LINE L1 6235 6285 -6 2396 89 0 0 chr10 105284033 105284326 -35032439 + AluSq SINE Alu 2 294 -19 2022 158 7 0 chr10 105284332 105284636 -35032129 + AluSx SINE Alu 1 306 -6 222 314 105 0 chr10 105285733 105285819 -35030946 + MER5A DNA MER1_type 52 146 -43 501 292 105 10 chr10 105285943 105286152 -35030613 + MIR SINE MIR 34 262 0 2414 88 0 0 chr10 105286464 105286760 -35030005 + AluSq SINE Alu 1 296 -17 230 235 35 59 chr10 105287162 105287247 -35029518 + MIR SINE MIR 99 181 -81 567 199 219 7 chr10 105287919 105288065 -35028700 + MIR SINE MIR 19 195 -67 921 272 38 14 chr10 105288151 105288441 -35028324 - MLT1J LTR MaLR -208 303 7 390 159 11 34 chr10 105288517 105288605 -35028160 - LTR45 LTR ERV1 -57 468 383 2390 83 13 16 chr10 105288898 105289210 -35027555 - AluSq SINE Alu -2 311 1 1332 221 43 6 chr10 105290524 105290850 -35025915 + MER46C DNA MER2_type 1 338 0 37 39 0 0 chr10 105293040 105293091 -35023674 + AT_rich Low_complexity Low_complexity 1 51 0 1289 189 13 4 chr10 105294158 105294386 -35022379 - AluJo SINE Alu -31 281 52 1411 168 62 0 chr10 105294386 105294480 -35022285 + AluJo SINE Alu 29 116 -196 198 0 0 0 chr10 105294480 105294502 -35022263 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1411 168 62 0 chr10 105294502 105294651 -35022114 + AluJo SINE Alu 116 287 -25 1448 149 4 13 chr10 105295191 105295419 -35021346 - AluJb SINE Alu -21 291 66 2550 71 3 0 chr10 105295562 105295871 -35020894 - AluY SINE Alu -1 310 1 317 298 176 0 chr10 105296300 105296431 -35020334 - MIR SINE MIR 0 262 109 2218 123 3 0 chr10 105297228 105297537 -35019228 + AluSx SINE Alu 1 310 -2 902 181 11 11 chr10 105297781 105297958 -35018807 - AluJo SINE Alu -15 297 121 23 54 0 0 chr10 105298537 105298574 -35018191 + AT_rich Low_complexity Low_complexity 1 37 0 1640 152 76 0 chr10 105298636 105298912 -35017853 - AluJb SINE Alu -4 308 12 407 206 65 19 chr10 105298958 105299065 -35017700 - Alu SINE Alu -198 112 1 718 188 0 16 chr10 105299199 105299327 -35017438 - FLAM_A SINE Alu -6 127 2 2234 120 0 0 chr10 105299337 105299636 -35017129 - AluSx SINE Alu -13 299 1 1135 201 23 76 chr10 105299721 105300064 -35016701 - MLT1C LTR MaLR 0 467 143 551 168 127 12 chr10 105301716 105301889 -35014876 - Charlie7 DNA MER1_type 0 2612 2420 456 66 211 0 chr10 105301952 105302028 -35014737 - Charlie7 DNA MER1_type -2518 94 3 807 206 19 0 chr10 105302726 105302881 -35013884 + FRAM SINE Alu 1 158 -8 1943 159 3 7 chr10 105302883 105303179 -35013586 + AluJb SINE Alu 1 295 -17 2266 80 0 13 chr10 105303185 105303484 -35013281 + AluY SINE Alu 1 295 -16 4099 155 43 19 chr10 105303642 105304502 -35012263 - L1MB3 LINE L1 0 6183 5303 207 0 0 0 chr10 105304606 105304629 -35012136 + (CA)n Simple_repeat Simple_repeat 1 23 0 291 28 0 0 chr10 105304629 105304665 -35012100 + (GA)n Simple_repeat Simple_repeat 1 36 0 806 223 96 9 chr10 105305194 105305414 -35011351 + MIR SINE MIR 23 261 -1 250 250 113 24 chr10 105306760 105306884 -35009881 - MLT1J LTR MaLR -2 509 375 504 301 15 39 chr10 105306958 105307164 -35009601 - MLT1J LTR MaLR -310 201 1 2179 120 0 0 chr10 105308272 105308564 -35008201 + AluSg SINE Alu 1 292 -18 863 136 0 16 chr10 105308706 105308831 -35007934 + FLAM_C SINE Alu 8 130 -13 540 252 63 100 chr10 105309154 105309253 -35007512 - L2 LINE L2 -39 3274 3173 261 0 0 0 chr10 105309253 105309282 -35007483 + (TG)n Simple_repeat Simple_repeat 1 29 0 540 252 63 100 chr10 105309282 105309452 -35007313 - L2 LINE L2 -140 3173 3015 232 170 27 170 chr10 105309456 105309568 -35007197 - L3 LINE CR1 -457 1120 1025 338 176 0 0 chr10 105309612 105309680 -35007085 + AluJ/FRAM SINE Alu 233 300 -2 449 295 0 0 chr10 105309687 105309816 -35006949 - L3 LINE CR1 -686 891 763 2088 120 3 0 chr10 105310224 105310539 -35006226 - AluSx SINE Alu 0 316 1 24 0 0 0 chr10 105310589 105310613 -35006152 + AT_rich Low_complexity Low_complexity 1 24 0 297 281 55 7 chr10 105310742 105310888 -35005877 - L1MC4a LINE L1 -1921 5887 5735 1996 114 0 31 chr10 105311148 105311481 -35005284 - AluSx SINE Alu 0 325 2 23 68 0 0 chr10 105311583 105311627 -35005138 + AT_rich Low_complexity Low_complexity 1 44 0 2231 102 0 3 chr10 105311674 105311968 -35004797 + AluSg SINE Alu 1 293 -17 1608 155 85 7 chr10 105311979 105312250 -35004515 + AluSx SINE Alu 1 292 -20 2220 131 0 6 chr10 105312407 105312721 -35004044 - AluJb SINE Alu 0 312 1 2287 60 4 7 chr10 105312878 105313194 -35003571 - AluY SINE Alu 0 315 1 245 125 107 0 chr10 105313195 105313251 -35003514 - L1M3 LINE L1 -723 5448 5387 313 302 122 7 chr10 105313459 105313598 -35003167 + MIR SINE MIR 36 190 -72 212 57 0 29 chr10 105313616 105313651 -35003114 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1244 174 114 0 chr10 105313652 105313871 -35002894 - AluJb SINE Alu -68 244 1 1872 159 10 7 chr10 105314169 105314470 -35002295 - AluSx SINE Alu -10 302 1 262 269 40 40 chr10 105315538 105315761 -35001004 + L1 LINE L1 4109 4331 -1815 773 199 53 7 chr10 105315799 105315950 -35000815 + FRAM SINE Alu 1 158 -18 2329 87 7 7 chr10 105315956 105316254 -35000511 + AluSx SINE Alu 1 298 -14 321 226 1 96 chr10 105316264 105316426 -35000339 + L1M LINE L1 5270 5420 -939 1854 158 0 7 chr10 105316931 105317222 -34999543 - AluJb SINE Alu -23 289 1 324 261 0 0 chr10 105317269 105317388 -34999377 + C-rich Low_complexity Low_complexity 4 122 0 216 0 0 0 chr10 105317388 105317412 -34999353 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1786 160 0 14 chr10 105317413 105317700 -34999065 - AluJo SINE Alu -29 283 1 704 224 84 6 chr10 105318263 105318442 -34998323 - MIR SINE MIR -1 261 69 1303 238 72 37 chr10 105318623 105319052 -34997713 - MER21B LTR ERV1 -57 806 363 2146 87 7 0 chr10 105319104 105319379 -34997386 - AluSx SINE Alu -35 277 1 545 175 10 10 chr10 105319382 105319485 -34997280 - AluJo/FLAM SINE Alu -205 107 5 726 229 138 98 chr10 105319518 105319845 -34996920 - MER21B LTR ERV1 -523 340 1 26 82 0 0 chr10 105319990 105320051 -34996714 + AT_rich Low_complexity Low_complexity 1 61 0 586 233 79 34 chr10 105320290 105320512 -34996253 + L1ME2 LINE L1 5944 6332 -2 2523 66 0 0 chr10 105320774 105321075 -34995690 + AluY SINE Alu 1 301 -10 2409 83 0 16 chr10 105321303 105321615 -34995150 + AluSx SINE Alu 1 307 -5 883 303 54 32 chr10 105322259 105322573 -34994192 - L2 LINE L2 -5 3308 2988 265 214 90 62 chr10 105322681 105322826 -34993939 - L1MC5 LINE L1 -48 7913 7765 1901 166 10 0 chr10 105322886 105323187 -34993578 - AluSx SINE Alu -8 304 1 299 106 0 21 chr10 105323890 105323937 -34992828 - Alu SINE Alu -7 294 249 22 0 0 0 chr10 105323937 105323959 -34992806 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 105324409 105324441 -34992324 + AT_rich Low_complexity Low_complexity 1 32 0 351 302 50 50 chr10 105324473 105324655 -34992110 + MIR SINE MIR 26 207 -55 687 202 0 8 chr10 105324909 105325028 -34991737 + FLAM_A SINE Alu 1 118 -15 2226 80 0 14 chr10 105325165 105325454 -34991311 + AluY SINE Alu 5 289 -22 2069 145 0 0 chr10 105326159 105326456 -34990309 - AluSx SINE Alu -15 297 1 222 304 41 70 chr10 105327042 105327213 -34989552 + MIR SINE MIR 11 176 -86 2413 82 0 7 chr10 105327519 105327823 -34988942 + AluSq SINE Alu 1 302 -11 1455 191 68 5 chr10 105327934 105328283 -34988482 - LTR32 LTR ERVL 0 471 15 2197 92 3 3 chr10 105328523 105328815 -34987950 + AluSx SINE Alu 2 293 -19 2315 104 0 16 chr10 105328820 105329129 -34987636 + AluSx SINE Alu 1 304 -8 2338 95 0 0 chr10 105329217 105329511 -34987254 + AluSq SINE Alu 1 294 -19 2155 98 3 20 chr10 105329583 105329879 -34986886 - AluSg SINE Alu -19 291 1 776 112 80 32 chr10 105329911 105330036 -34986729 + FLAM_C SINE Alu 1 131 -2 2264 95 10 0 chr10 105330218 105330512 -34986253 - AluSx SINE Alu -15 297 1 1799 176 0 3 chr10 105330535 105330836 -34985929 + AluJo SINE Alu 1 300 -12 382 296 28 56 chr10 105330899 105331112 -34985653 - L1MC/D LINE L1 -2080 5728 5522 1623 197 7 14 chr10 105331222 105331501 -34985264 + AluJo SINE Alu 1 277 -35 2356 84 0 3 chr10 105331502 105331800 -34984965 - AluY SINE Alu -14 297 1 1415 187 7 51 chr10 105332046 105332186 -34984579 + AluJo SINE Alu 8 130 -182 2269 114 7 0 chr10 105332186 105332484 -34984281 + AluSx SINE Alu 1 300 -12 1415 187 7 51 chr10 105332484 105332637 -34984128 + AluJo SINE Alu 130 288 -24 198 103 0 0 chr10 105333107 105333136 -34983629 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 1869 172 3 3 chr10 105333203 105333500 -34983265 + AluJo SINE Alu 1 297 -15 2311 93 6 31 chr10 105333898 105334219 -34982546 - AluSq SINE Alu 0 313 1 1290 127 0 0 chr10 105334449 105334638 -34982127 + AluSg/x SINE Alu 121 309 -1 3289 181 61 49 chr10 105336317 105337352 -34979413 - L1MB7 LINE L1 0 6184 5144 398 263 80 51 chr10 105337460 105337559 -34979206 - MER5A DNA MER1_type -6 183 75 2399 61 3 6 chr10 105337559 105337870 -34978895 - AluY SINE Alu -1 310 1 398 263 80 51 chr10 105337870 105337945 -34978820 - MER5A DNA MER1_type -114 75 4 306 50 0 0 chr10 105339390 105339430 -34977335 + (TG)n Simple_repeat Simple_repeat 1 40 0 23 33 0 0 chr10 105341320 105341350 -34975415 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 105341586 105341613 -34975152 + (T)n Simple_repeat Simple_repeat 1 27 0 231 266 156 46 chr10 105341964 105342073 -34974692 - L2 LINE L2 -3 3310 3190 789 247 111 13 chr10 105342479 105342714 -34974051 + MIR SINE MIR 2 259 -3 21 0 0 0 chr10 105342874 105342895 -34973870 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr10 105344363 105344389 -34972376 + (C)n Simple_repeat Simple_repeat 1 26 0 272 191 29 29 chr10 105344572 105344640 -34972125 + MIR SINE MIR 86 153 -109 238 259 12 24 chr10 105345978 105346063 -34970702 + (CCCCG)n Simple_repeat Simple_repeat 1 84 0 * 239 229 14 14 chr10 105346012 105346082 -34970683 + C-rich Low_complexity Low_complexity 2 71 0 199 113 38 0 chr10 105347106 105347159 -34969606 + (CA)n Simple_repeat Simple_repeat 1 55 0 180 0 0 0 chr10 105347677 105347697 -34969068 + (TG)n Simple_repeat Simple_repeat 1 20 0 1856 177 10 0 chr10 105350336 105350635 -34966130 - AluJo SINE Alu -9 303 2 1682 179 13 3 chr10 105350743 105351044 -34965721 + AluJo SINE Alu 1 304 -8 277 208 179 9 chr10 105351159 105351265 -34965500 - MIR SINE MIR -64 198 75 883 145 0 36 chr10 105351390 105351528 -34965237 + FLAM_C SINE Alu 1 133 0 232 321 24 0 chr10 105351639 105351723 -34965042 - L2 LINE L2 -464 2850 2765 237 245 245 10 chr10 105351773 105351875 -34964890 + MER5A DNA MER1_type 41 166 -23 * 570 154 0 0 chr10 105351808 105351899 -34964866 - MER5A DNA MER1_type -88 101 11 298 208 231 23 chr10 105351973 105352103 -34964662 - MER103 DNA DNA -9 157 1 1589 100 29 125 chr10 105352137 105352488 -34964277 + AluYb8 SINE Alu 2 318 0 193 281 69 54 chr10 105352727 105352898 -34963867 - L2 LINE L2 -326 2946 2788 1609 126 138 0 chr10 105352930 105353184 -34963581 - AluJo SINE Alu -23 289 1 364 369 52 25 chr10 105353430 105353793 -34962972 - L2 LINE L2 -660 2654 2282 2434 138 45 11 chr10 105354304 105354746 -34962019 - LTR32 LTR ERVL 0 471 15 2091 76 0 0 chr10 105355947 105356211 -34960554 - AluSc SINE Alu -15 294 31 263 250 0 0 chr10 105357915 105357971 -34958794 + L2 LINE L2 3258 3313 0 698 262 48 85 chr10 105358128 105358336 -34958429 - MIR SINE MIR -1 261 64 2045 155 0 13 chr10 105358336 105358652 -34958113 + AluJb SINE Alu 1 312 0 698 262 48 85 chr10 105358652 105358714 -34958051 - MIR SINE MIR -198 64 1 685 298 236 20 chr10 105358841 105359071 -34957694 - L2 LINE L2 -518 2796 2617 2206 109 3 0 chr10 105359071 105359375 -34957390 + AluSx SINE Alu 1 305 -7 685 298 236 20 chr10 105359375 105359704 -34957061 - L2 LINE L2 -697 2617 2116 1793 148 0 30 chr10 105366582 105366879 -34949886 + AluJo SINE Alu 1 288 -24 239 340 31 89 chr10 105367716 105368007 -34948758 - L2 LINE L2 -55 3217 2944 1728 159 9 58 chr10 105368158 105368291 -34948474 + AluJb SINE Alu 1 139 -173 2195 57 13 40 chr10 105368291 105368582 -34948183 + AluY SINE Alu 1 285 -26 185 0 40 0 chr10 105368582 105368607 -34948158 + (TA)n Simple_repeat Simple_repeat 2 27 0 1728 159 9 58 chr10 105368614 105368764 -34948001 + AluJb SINE Alu 139 268 -44 2433 71 0 6 chr10 105368764 105369075 -34947690 - AluY SINE Alu -2 309 1 1728 159 9 58 chr10 105369075 105369117 -34947648 + AluJb SINE Alu 268 311 -1 213 285 132 49 chr10 105369118 105369262 -34947503 - L2 LINE L2 -267 3046 2891 2273 107 0 0 chr10 105369338 105369646 -34947119 - AluY SINE Alu -3 308 1 887 281 101 23 chr10 105370236 105370631 -34946134 - L2 LINE L2 -22 3291 2866 251 259 34 129 chr10 105371361 105371508 -34945257 - MER5A DNA MER1_type -2 187 55 203 263 8 128 chr10 105371393 105371526 -34945239 + MER5A DNA MER1_type 47 163 -26 * 2250 70 18 0 chr10 105372679 105372963 -34943802 + AluSg SINE Alu 1 289 -21 183 80 0 0 chr10 105373609 105373634 -34943131 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr10 105376033 105376054 -34940711 + GC_rich Low_complexity Low_complexity 1 21 0 201 189 38 0 chr10 105376324 105376377 -34940388 + G-rich Low_complexity Low_complexity 4 58 0 219 220 0 0 chr10 105376403 105376453 -34940312 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 439 260 47 8 chr10 105379585 105379712 -34937053 + MIR SINE MIR 16 147 -61 425 294 29 41 chr10 105379721 105379891 -34936874 + MIR SINE MIR 4 171 -91 237 65 0 0 chr10 105380218 105380249 -34936516 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1814 177 14 0 chr10 105380885 105381179 -34935586 + AluSx SINE Alu 1 298 -14 733 272 51 0 chr10 105381194 105381411 -34935354 + MIR SINE MIR 35 262 0 1003 82 8 8 chr10 105381424 105381558 -34935207 - AluSq/x SINE Alu -179 134 1 1510 178 8 0 chr10 105381568 105381815 -34934950 - AluJb SINE Alu -16 296 48 664 219 209 0 chr10 105382497 105382684 -34934081 - MIR SINE MIR -22 240 15 391 349 45 0 chr10 105382819 105382951 -34933814 + MIR SINE MIR 18 155 -107 29 28 0 0 chr10 105384362 105384398 -34932367 + AT_rich Low_complexity Low_complexity 1 36 0 2383 74 3 0 chr10 105386158 105386467 -34930298 - AluSp SINE Alu -3 310 1 1931 111 3 24 chr10 105386467 105386755 -34930010 - AluSx SINE Alu -30 282 1 200 191 0 0 chr10 105387094 105387136 -34929629 + (CTG)n Simple_repeat Simple_repeat 2 43 0 2000 97 24 3 chr10 105387611 105387901 -34928864 - AluSx SINE Alu -16 296 1 561 212 123 17 chr10 105389054 105389233 -34927532 - MIR SINE MIR -29 233 36 254 357 133 52 chr10 105389820 105390106 -34926659 - L2 LINE L2 -5 3267 2959 2295 81 3 28 chr10 105390399 105390719 -34926046 - AluSq SINE Alu -1 312 1 223 324 69 0 chr10 105390803 105390905 -34925860 - MER5B DNA MER1_type -17 161 53 230 191 0 15 chr10 105391232 105391300 -34925465 + (CA)n Simple_repeat Simple_repeat 2 68 0 295 329 122 36 chr10 105391826 105392025 -34924740 + L2 LINE L2 2983 3218 -95 252 0 0 0 chr10 105392025 105392053 -34924712 + (TG)n Simple_repeat Simple_repeat 1 28 0 295 329 122 36 chr10 105392053 105392157 -34924608 + L2 LINE L2 3218 3312 -1 183 326 74 7 chr10 105393081 105393216 -34923549 - L2 LINE L2 -459 2855 2712 294 323 54 6 chr10 105393239 105393406 -34923359 - L2 LINE L2 -1136 2178 2004 835 282 201 3 chr10 105393532 105393911 -34922854 + MLT1K LTR MaLR 12 465 -123 758 145 0 0 chr10 105393944 105394061 -34922704 - FLAM_A SINE Alu 0 142 26 1464 201 3 14 chr10 105394061 105394495 -34922270 + AluSq SINE Alu 1 313 0 371 271 107 7 chr10 105394499 105394639 -34922126 - MIR SINE MIR -108 154 1 302 284 0 0 chr10 105394878 105394959 -34921806 + G-rich Low_complexity Low_complexity 2 82 0 432 55 0 0 chr10 105396103 105396158 -34920607 + (TCC)n Simple_repeat Simple_repeat 2 56 0 1645 178 3 31 chr10 105396158 105396176 -34920589 - AluJo SINE Alu 0 312 295 2067 142 7 0 chr10 105396176 105396486 -34920279 - AluSx SINE Alu 0 312 1 1645 178 3 31 chr10 105396486 105396655 -34920110 - AluJo SINE Alu -17 295 135 2143 76 17 10 chr10 105396655 105396966 -34919799 - AluSp SINE Alu 0 313 1 1645 178 3 31 chr10 105396966 105397098 -34919667 - AluJo SINE Alu -177 135 1 240 319 159 6 chr10 105397323 105397486 -34919279 + L2 LINE L2 2823 3010 -303 605 207 195 12 chr10 105397491 105397660 -34919105 + L2 LINE L2 3112 3311 -2 329 295 34 60 chr10 105398127 105398276 -34918489 + MIR SINE MIR 50 194 -68 1241 150 0 40 chr10 105399153 105399320 -34917445 - AluJo SINE Alu -10 302 145 2284 106 3 0 chr10 105399320 105399632 -34917133 - AluSp SINE Alu 0 313 1 1241 150 0 40 chr10 105399632 105399691 -34917074 - AluJo SINE Alu -167 145 85 1744 172 3 10 chr10 105400802 105401092 -34915673 - AluJo SINE Alu -13 299 12 1055 126 66 6 chr10 105401193 105401360 -34915405 + AluJb SINE Alu 135 311 -1 261 0 0 0 chr10 105401396 105401425 -34915340 + (TG)n Simple_repeat Simple_repeat 2 30 0 436 281 63 113 chr10 105401518 105401766 -34914999 + L3 LINE CR1 1154 1413 -164 2150 130 3 0 chr10 105401766 105402067 -34914698 - AluSg SINE Alu -8 302 1 436 281 63 113 chr10 105402067 105402083 -34914682 + L3 LINE CR1 1413 1428 -149 2327 64 0 0 chr10 105402083 105402407 -34914358 - AluY SINE Alu 0 324 1 436 281 63 113 chr10 105402407 105402502 -34914263 + L3 LINE CR1 1428 1498 -79 2201 102 0 0 chr10 105402699 105402993 -34913772 - AluSx SINE Alu -16 296 3 441 0 0 0 chr10 105403224 105403273 -34913492 + (CA)n Simple_repeat Simple_repeat 1 49 0 465 293 166 3 chr10 105403568 105404007 -34912758 + L2 LINE L2 2562 3059 -213 794 273 16 0 chr10 105404035 105404218 -34912547 + MER5A DNA MER1_type 2 187 -2 263 301 82 34 chr10 105404271 105404417 -34912348 + L2 LINE L2 3160 3312 -1 1826 136 41 27 chr10 105404866 105404987 -34911778 + AluJo SINE Alu 1 119 -193 180 0 0 0 chr10 105404987 105405007 -34911758 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1826 136 41 27 chr10 105405007 105405180 -34911585 + AluJo SINE Alu 119 299 -13 3616 198 23 81 chr10 105410093 105411121 -34905644 - LTR5 LTR ERVK 0 969 1 995 262 117 32 chr10 105414404 105414847 -34901918 - L2 LINE L2 -2 3311 2831 1958 142 10 3 chr10 105417147 105417443 -34899322 - AluSx SINE Alu -14 298 1 2000 122 3 28 chr10 105418059 105418379 -34898386 - AluJb SINE Alu 0 312 1 239 103 0 0 chr10 105418507 105418546 -34898219 - MADE1 DNA Mariner -41 39 1 239 103 0 0 chr10 105420650 105420689 -34896076 - MADE1 DNA Mariner -41 39 1 619 112 53 94 chr10 105421058 105421148 -34895617 - L1MB2 LINE L1 -2 6169 6077 859 144 0 0 chr10 105421148 105421273 -34895492 + FLAM_C SINE Alu 1 125 -8 477 90 0 0 chr10 105421275 105421342 -34895423 + (TA)n Simple_repeat Simple_repeat 1 67 0 619 112 53 94 chr10 105421342 105421418 -34895347 - L1MB2 LINE L1 -95 6076 6007 272 286 0 24 chr10 105421421 105421505 -34895260 + L2 LINE L2 3232 3313 0 2396 87 6 0 chr10 105422301 105422612 -34894153 - AluSp SINE Alu 0 313 1 362 202 11 11 chr10 105422612 105422701 -34894064 + MER119 DNA MER1_type 495 583 0 1625 184 19 32 chr10 105422736 105423116 -34893649 + AluJo SINE Alu 1 376 0 261 262 299 0 chr10 105425340 105425447 -34891318 + L2 LINE L2 3134 3272 0 413 310 114 6 chr10 105425694 105425852 -34890913 - MIR3 SINE MIR -33 175 1 2260 85 0 13 chr10 105426159 105426465 -34890300 + AluSx SINE Alu 1 302 -10 543 322 139 4 chr10 105427755 105427985 -34888780 + MIR SINE MIR 2 262 0 1814 126 7 24 chr10 105428010 105428304 -34888461 - AluJo SINE Alu -23 289 1 306 303 41 8 chr10 105428362 105428484 -34888281 - MER102b DNA MER1_type -25 316 191 1920 142 7 3 chr10 105429029 105429325 -34887440 + AluSx SINE Alu 1 297 -15 1819 172 0 7 chr10 105429330 105429633 -34887132 + AluJo SINE Alu 1 301 -11 1503 192 45 0 chr10 105429834 105430121 -34886644 - AluJo SINE Alu -12 300 1 2231 98 13 7 chr10 105430541 105430847 -34885918 + AluSx SINE Alu 1 308 -4 1347 168 34 0 chr10 105430868 105431106 -34885659 + AluJo SINE Alu 67 312 0 1352 311 49 8 chr10 105431221 105431691 -34885074 - LTR16C LTR ERVL 0 491 3 241 178 27 96 chr10 105431882 105431955 -34884810 - L2 LINE L2 -1018 2296 2229 891 159 0 0 chr10 105432183 105432315 -34884450 - FLAM_A SINE Alu -1 132 1 773 211 42 36 chr10 105432492 105432758 -34884007 + L1MD3 LINE L1 6091 7995 0 363 241 21 28 chr10 105432824 105432965 -34883800 + L1ME3A LINE L1 5463 5602 -568 582 200 26 0 chr10 105432965 105433080 -34883685 + FLAM_C SINE Alu 26 143 0 570 105 29 9 chr10 105433080 105433185 -34883580 + GA-rich Low_complexity Low_complexity 2 108 0 253 213 33 0 chr10 105433191 105433252 -34883513 + L1ME3A LINE L1 5588 5650 -520 521 251 43 55 chr10 105433253 105433310 -34883455 + L1ME3A LINE L1 5919 5975 -195 1663 183 7 17 chr10 105433310 105433636 -34883129 + AluJo SINE Alu 1 323 0 521 251 43 55 chr10 105433636 105433832 -34882933 + L1ME3A LINE L1 5975 6170 0 2121 123 13 0 chr10 105433859 105434167 -34882598 + AluSp SINE Alu 1 312 -1 2190 121 7 0 chr10 105434469 105434776 -34881989 - AluSx SINE Alu -3 309 1 1492 114 91 57 chr10 105434852 105435116 -34881649 + AluSx SINE Alu 40 312 0 2287 98 0 3 chr10 105435658 105435965 -34880800 - AluSx SINE Alu -6 306 1 531 158 0 32 chr10 105435996 105436091 -34880674 - AluJo SINE Alu -94 218 127 313 325 65 8 chr10 105436800 105436923 -34879842 - L2 LINE L2 -3 3269 3140 21 0 0 0 chr10 105437721 105437742 -34879023 + GC_rich Low_complexity Low_complexity 1 21 0 201 240 0 40 chr10 105439154 105439229 -34877536 + (CTG)n Simple_repeat Simple_repeat 3 74 0 220 26 103 0 chr10 105443696 105443735 -34873030 + G-rich Low_complexity Low_complexity 3 45 0 303 262 34 107 chr10 105444669 105444818 -34871947 + L1MC4 LINE L1 6572 6709 -1333 2089 89 36 4 chr10 105444848 105445129 -34871636 - AluSx SINE Alu -22 290 1 963 193 33 6 chr10 105445405 105445613 -34871152 - AluJo SINE Alu 0 309 97 1319 149 40 40 chr10 105445647 105445896 -34870869 + AluJo SINE Alu 21 269 -43 211 167 0 24 chr10 105445899 105445941 -34870824 - L2 LINE L2 -83 3230 3190 219 265 24 24 chr10 105446474 105446557 -34870208 + (TTGGGG)n Simple_repeat Simple_repeat 2 84 0 836 160 0 0 chr10 105447320 105447445 -34869320 - FLAM_A SINE Alu -8 125 1 868 162 30 30 chr10 105447926 105448093 -34868672 - FRAM SINE Alu -4 172 6 380 257 160 6 chr10 105448095 105448270 -34868495 + MIR SINE MIR 61 262 0 239 200 18 18 chr10 105450368 105450423 -34866342 + GA-rich Low_complexity Low_complexity 4 58 0 1985 133 36 0 chr10 105451235 105451536 -34865229 - AluSx SINE Alu 0 312 1 302 0 0 26 chr10 105451549 105451588 -34865177 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 951 141 31 6 chr10 105451588 105451751 -34865014 - AluJo SINE Alu -26 286 120 602 290 29 39 chr10 105451853 105452060 -34864705 + MIR3 SINE MIR 1 205 -3 1869 161 3 0 chr10 105453307 105453598 -34863167 + AluJo SINE Alu 1 292 -20 339 337 18 41 chr10 105453660 105453829 -34862936 - L1ME4a LINE L1 -95 6026 5862 1049 57 0 0 chr10 105453835 105453958 -34862807 + AluY SINE Alu 1 123 -188 1159 43 0 0 chr10 105453965 105454106 -34862659 + L1PA3 LINE L1 6015 6155 0 1516 43 5 0 chr10 105454119 105454306 -34862459 + AluY SINE Alu 119 306 -5 256 307 86 12 chr10 105454375 105454538 -34862227 - L1ME4a LINE L1 -340 5781 5607 2120 109 21 0 chr10 105454542 105454827 -34861938 + AluSx SINE Alu 4 294 -18 227 363 28 45 chr10 105454909 105455088 -34861677 + L2 LINE L2 2293 2468 -846 312 325 8 8 chr10 105455099 105455222 -34861543 - MER94 DNA DNA -11 123 1 2253 96 10 0 chr10 105455864 105456165 -34860600 - AluSx SINE Alu -8 304 1 273 206 0 44 chr10 105456865 105456933 -34859832 + GA-rich Low_complexity Low_complexity 3 67 0 1814 154 28 0 chr10 105457172 105457458 -34859307 - AluJb SINE Alu -18 294 1 247 197 61 0 chr10 105457538 105457604 -34859161 + GA-rich Low_complexity Low_complexity 5 74 0 2280 119 0 0 chr10 105458702 105459014 -34857751 - AluSx SINE Alu 0 312 1 189 316 18 0 chr10 105460315 105460372 -34856393 + MIR SINE MIR 46 103 -159 2151 122 0 0 chr10 105460372 105460697 -34856068 - AluSx SINE Alu 0 312 1 976 196 0 0 chr10 105460699 105460862 -34855903 - FRAM SINE Alu -18 158 1 1581 155 0 110 chr10 105460879 105461215 -34855550 + AluJo SINE Alu 2 300 -2 528 286 66 63 chr10 105461237 105461600 -34855165 - MLT2C2 LTR ERVL -57 407 44 * 952 174 20 0 chr10 105461422 105461612 -34855153 - MLT1E3 LTR MaLR -348 306 53 1317 142 0 0 chr10 105461636 105461826 -34854939 + AluSx SINE Alu 38 227 -85 243 207 35 0 chr10 105461837 105461895 -34854870 + AluSx SINE Alu 204 263 -39 1904 125 3 26 chr10 105462918 105463222 -34853543 - AluSq SINE Alu -16 297 1 359 236 7 57 chr10 105464495 105464635 -34852130 + GA-rich Low_complexity Low_complexity 2 134 0 602 291 21 11 chr10 105465862 105466051 -34850714 - MIR SINE MIR -28 234 44 468 284 57 0 chr10 105467327 105467468 -34849297 + MIR SINE MIR 104 252 -10 273 208 0 0 chr10 105467750 105467822 -34848943 + (TG)n Simple_repeat Simple_repeat 1 72 0 311 237 26 0 chr10 105468486 105468562 -34848203 + MIR SINE MIR 80 157 -105 1903 176 0 3 chr10 105468833 105469146 -34847619 - AluJo SINE Alu 0 312 1 457 304 54 17 chr10 105469148 105469388 -34847377 - L1MC/D LINE L1 -1986 5822 5574 218 264 11 11 chr10 105470395 105470486 -34846279 + (CA)n Simple_repeat Simple_repeat 1 91 0 290 315 22 11 chr10 105473488 105473577 -34843188 + MER5A DNA MER1_type 63 152 -37 2188 127 0 0 chr10 105474954 105475261 -34841504 + AluSx SINE Alu 1 307 -5 806 203 0 62 chr10 105475271 105475421 -34841344 + FRAM SINE Alu 1 140 -162 630 0 0 0 chr10 105475421 105475491 -34841274 + (TA)n Simple_repeat Simple_repeat 1 70 0 806 203 0 62 chr10 105475491 105475517 -34841248 + FRAM SINE Alu 140 166 0 485 261 155 43 chr10 105475525 105475732 -34841033 - MIR SINE MIR -13 249 20 311 325 114 0 chr10 105476596 105476710 -34840055 + MIR SINE MIR 64 190 -72 486 160 92 50 chr10 105477291 105477410 -34839355 + MER5B DNA MER1_type 1 124 -54 1322 143 71 91 chr10 105477428 105477736 -34839029 + AluJo SINE Alu 11 312 0 374 39 0 19 chr10 105477746 105477798 -34838967 + MER5B DNA MER1_type 128 178 0 222 384 15 23 chr10 105477883 105478016 -34838749 + MER5A DNA MER1_type 57 188 -1 295 246 119 4 chr10 105478027 105478134 -34838631 - MER5A DNA MER1_type -2 187 42 419 348 105 37 chr10 105478154 105478562 -34838203 - L2 LINE L2 -466 2848 2413 416 293 15 15 chr10 105479120 105479253 -34837512 + MIR SINE MIR 18 150 -112 838 145 0 0 chr10 105479260 105479391 -34837374 + FLAM_C SINE Alu 11 141 -2 308 132 0 44 chr10 105479427 105479495 -34837270 + Alu SINE Alu 238 302 0 542 202 50 8 chr10 105479503 105479622 -34837143 + MIR SINE MIR 136 259 -3 508 154 0 0 chr10 105479679 105479757 -34837008 + AluJ/FLAM SINE Alu 1 78 -234 378 0 0 0 chr10 105479757 105479799 -34836966 + (TAA)n Simple_repeat Simple_repeat 1 42 0 24 0 0 0 chr10 105481033 105481057 -34835708 + AT_rich Low_complexity Low_complexity 1 24 0 2466 61 0 3 chr10 105481277 105481589 -34835176 - AluY SINE Alu 0 311 1 700 218 68 0 chr10 105482870 105483003 -34833762 + FLAM_C SINE Alu 1 142 -1 182 114 0 29 chr10 105483003 105483038 -34833727 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 704 167 48 0 chr10 105483143 105483311 -34833454 + GA-rich Low_complexity Low_complexity 1 176 0 218 304 0 0 chr10 105483437 105483493 -34833272 + (TGGA)n Simple_repeat Simple_repeat 1 56 0 643 232 83 0 chr10 105484524 105484692 -34832073 - MIR SINE MIR 0 262 81 1994 92 0 15 chr10 105484692 105485010 -34831755 - AluSc SINE Alu 0 326 13 2021 95 40 0 chr10 105485025 105485331 -34831434 - AluSx SINE Alu 0 317 1 1811 152 0 0 chr10 105485725 105485988 -34830777 + AluJb SINE Alu 9 271 -41 26 30 0 0 chr10 105487383 105487416 -34829349 + GC_rich Low_complexity Low_complexity 1 33 0 323 23 23 0 chr10 105491043 105491087 -34825678 + (TG)n Simple_repeat Simple_repeat 1 45 0 633 292 44 35 chr10 105495558 105495700 -34821065 - MIR SINE MIR -15 247 101 1710 72 0 0 chr10 105495700 105495922 -34820843 + AluSq SINE Alu 1 222 -91 633 292 44 35 chr10 105495922 105496005 -34820760 - MIR SINE MIR -161 101 20 1542 162 33 4 chr10 105496620 105496892 -34819873 + AluJb SINE Alu 1 280 -32 716 10 29 10 chr10 105496892 105496994 -34819771 + (GAAA)n Simple_repeat Simple_repeat 4 107 0 2099 108 0 17 chr10 105501260 105501584 -34815181 + AluSq SINE Alu 1 319 0 1044 306 51 10 chr10 105501686 105502081 -34814684 - ERVL LTR ERVL -417 5347 4937 305 289 223 20 chr10 105502308 105502613 -34814152 - MLT1J1 LTR MaLR -22 424 58 464 308 36 50 chr10 105502851 105503052 -34813713 - ERVL LTR ERVL -1411 4243 4027 1586 153 68 0 chr10 105503052 105503333 -34813432 - AluJb SINE Alu -12 300 1 464 308 36 50 chr10 105503333 105503437 -34813328 - ERVL LTR ERVL -1627 4027 3923 1736 134 28 17 chr10 105503640 105503956 -34812809 + AluSg SINE Alu 1 319 0 1315 169 17 63 chr10 105504815 105505117 -34811648 - AluJo SINE Alu -4 308 21 235 315 37 88 chr10 105505278 105505494 -34811271 - LTR67 LTR ERVL -6 551 347 414 0 0 0 chr10 105505761 105505807 -34810958 + (CA)n Simple_repeat Simple_repeat 1 46 0 24 0 0 29 chr10 105506227 105506242 -34810523 + AT_rich Low_complexity Low_complexity 1 15 -19 1579 119 0 140 chr10 105506242 105506577 -34810188 + AluSx SINE Alu 2 289 -23 24 0 0 29 chr10 105506577 105506596 -34810169 + AT_rich Low_complexity Low_complexity 15 34 0 183 42 0 0 chr10 105506723 105506747 -34810018 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1893 128 3 7 chr10 105506749 105507039 -34809726 - AluSx SINE Alu -23 289 1 1779 136 14 28 chr10 105507481 105507767 -34808998 - AluJo SINE Alu -30 282 1 1141 86 0 0 chr10 105507782 105507965 -34808800 - AluY SINE Alu 0 313 131 1754 144 11 22 chr10 105508151 105508428 -34808337 + AluJo SINE Alu 9 282 -30 216 0 0 0 chr10 105508437 105508461 -34808304 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 368 118 0 0 chr10 105508856 105508907 -34807858 - MER66B LTR ERV1 -141 345 295 296 337 10 20 chr10 105509178 105509279 -34807486 + LTR67 LTR ERVL 99 198 -359 785 191 0 0 chr10 105509713 105509844 -34806921 - FLAM_C SINE Alu -2 131 1 506 261 55 40 chr10 105509869 105510068 -34806697 + MIR SINE MIR 8 209 -53 310 308 0 0 chr10 105510296 105510361 -34806404 - L2 LINE L2 -9 3263 3199 1627 221 87 45 chr10 105510847 105511393 -34805372 - MLT1F1 LTR MaLR -8 559 1 2937 158 33 21 chr10 105511695 105512175 -34804590 + MER66B LTR ERV1 1 486 0 320 250 67 66 chr10 105513128 105513299 -34803466 + L1MC4a LINE L1 5708 5780 -341 1859 138 0 35 chr10 105513299 105513611 -34803154 + AluJb SINE Alu 12 312 0 320 250 67 66 chr10 105513611 105513651 -34803114 + L1MC4a LINE L1 5780 5818 -303 205 245 0 0 chr10 105514525 105514574 -34802191 - L2 LINE L2 0 3272 3224 215 240 144 55 chr10 105515500 105515646 -34801119 + MIR SINE MIR 25 183 -79 757 282 108 18 chr10 105516231 105516508 -34800257 + AluJo SINE Alu 7 308 -4 208 206 0 0 chr10 105516508 105516542 -34800223 + polypurine Low_complexity Low_complexity 1 34 0 240 35 0 0 chr10 105516652 105516681 -34800084 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 3114 131 24 15 chr10 105516987 105517072 -34799693 - L1MA9 LINE L1 0 6312 6229 4313 144 43 14 chr10 105517072 105517774 -34798991 - MER72 LTR ERV1 0 722 1 3114 131 24 15 chr10 105517774 105518200 -34798565 - L1MA9 LINE L1 -83 6229 5793 229 51 51 0 chr10 105518200 105518239 -34798526 + (TA)n Simple_repeat Simple_repeat 2 42 0 3114 131 24 15 chr10 105518239 105518260 -34798505 - L1MA9 LINE L1 -519 5793 5774 3957 135 52 39 chr10 105518266 105518610 -34798155 - L1MB4 LINE L1 -1 6179 5841 1948 145 0 16 chr10 105518610 105518913 -34797852 - AluSx SINE Alu -14 298 1 3957 135 52 39 chr10 105518913 105519333 -34797432 - L1MB4 LINE L1 -339 5841 5405 324 224 164 8 chr10 105519393 105519527 -34797238 - L1ME3A LINE L1 -295 5875 5721 397 216 125 143 chr10 105519541 105519836 -34796929 - L1ME3A LINE L1 -498 5672 5386 517 229 56 28 chr10 105519836 105519980 -34796785 + MLT1K LTR MaLR 441 588 0 1478 168 19 8 chr10 105520416 105520678 -34796087 - AluJo SINE Alu -47 265 1 4190 76 14 9 chr10 105520786 105521339 -34795426 + L1PA10 LINE L1 5612 6167 -1 1747 199 84 0 chr10 105521458 105521779 -34794986 + MER7A DNA MER2_type 1 346 0 434 357 101 10 chr10 105521860 105522266 -34794499 - L1ME3A LINE L1 -306 5864 5422 1252 119 0 11 chr10 105522269 105522454 -34794311 - AluSq SINE Alu 0 313 131 576 264 60 21 chr10 105522460 105522741 -34794024 - L1ME3A LINE L1 -748 5398 5127 1848 150 0 55 chr10 105522753 105523079 -34793686 - AluJo SINE Alu -4 308 1 2234 96 0 7 chr10 105523111 105523413 -34793352 - AluSx SINE Alu -10 302 3 560 321 112 26 chr10 105523413 105523681 -34793084 - L1ME3A LINE L1 -1372 4774 4484 829 273 55 28 chr10 105523824 105524113 -34792652 - AluJb SINE Alu -2 300 4 761 105 9 26 chr10 105524728 105524842 -34791923 - FLAM_A SINE Alu -9 133 22 2504 56 0 0 chr10 105525408 105525711 -34791054 - AluY SINE Alu -5 306 4 2056 116 3 3 chr10 105525714 105526008 -34790757 - AluSx SINE Alu -16 296 3 1785 162 7 10 chr10 105526173 105526482 -34790283 + AluJo SINE Alu 1 308 -4 244 289 31 78 chr10 105526573 105526701 -34790064 - MIR SINE MIR -51 211 90 323 196 9 112 chr10 105527074 105527143 -34789622 + MER5A DNA MER1_type 9 65 -124 2172 107 0 13 chr10 105527143 105527451 -34789314 + AluSg SINE Alu 1 304 -6 323 196 9 112 chr10 105527451 105527488 -34789277 + MER5A DNA MER1_type 65 104 -85 921 204 14 18 chr10 105527661 105527882 -34788883 + AluJo SINE Alu 1 220 -92 1982 87 64 17 chr10 105528137 105528435 -34788330 - AluSx SINE Alu 0 312 1 1740 192 21 56 chr10 105528445 105528873 -34787892 - L1MD3 LINE L1 -1 7994 7582 2845 101 12 10 chr10 105528873 105529037 -34787728 - MER41B LTR ERV1 0 635 473 1541 69 9 14 chr10 105529037 105529255 -34787510 - AluY SINE Alu -12 299 83 2845 101 12 10 chr10 105529255 105529506 -34787259 - MER41B LTR ERV1 -162 473 219 1812 153 3 13 chr10 105529578 105529879 -34786886 + AluJb SINE Alu 3 300 -12 2284 153 18 38 chr10 105529995 105530233 -34786532 - MSTB LTR MaLR 0 426 198 1675 162 32 0 chr10 105530233 105530517 -34786248 - AluJb SINE Alu -19 293 1 2284 153 18 38 chr10 105530517 105530671 -34786094 - MSTB LTR MaLR -228 198 42 2043 117 7 26 chr10 105530681 105530836 -34785929 - AluSx SINE Alu -11 301 153 3642 62 2 5 chr10 105530836 105531285 -34785480 + LTR7 LTR ERV1 1 448 -2 2043 117 7 26 chr10 105531285 105531436 -34785329 - AluSx SINE Alu -159 153 1 330 104 0 0 chr10 105531436 105531484 -34785281 - MSTB LTR MaLR -371 55 8 359 94 0 0 chr10 105532399 105532452 -34784313 - L1MA3 LINE L1 0 6305 6253 429 327 67 37 chr10 105535519 105535788 -34780977 + L2 LINE L2 2992 3268 -4 236 140 40 0 chr10 105535812 105535862 -34780903 + CT-rich Low_complexity Low_complexity 4 55 0 197 159 23 0 chr10 105535949 105535993 -34780772 + G-rich Low_complexity Low_complexity 5 49 0 256 219 34 8 chr10 105536648 105536767 -34779998 + CT-rich Low_complexity Low_complexity 1 122 0 206 118 0 29 chr10 105537847 105537881 -34778884 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr10 105538527 105538548 -34778217 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 105538639 105538682 -34778083 + GC_rich Low_complexity Low_complexity 1 43 0 26 88 0 0 chr10 105540427 105540495 -34776270 + GC_rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 105540531 105540555 -34776210 + GC_rich Low_complexity Low_complexity 1 24 0 409 190 31 18 chr10 105540887 105541050 -34775715 + CT-rich Low_complexity Low_complexity 2 166 0 33 25 0 0 chr10 105541904 105541944 -34774821 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr10 105541998 105542019 -34774746 + GC_rich Low_complexity Low_complexity 1 21 0 274 301 0 0 chr10 105542155 105542248 -34774517 + (TG)n Simple_repeat Simple_repeat 1 93 0 267 31 0 0 chr10 105543296 105543328 -34773437 + (GA)n Simple_repeat Simple_repeat 2 33 0 553 255 48 34 chr10 105545075 105545283 -34771482 - MIR SINE MIR 0 262 52 1381 159 0 0 chr10 105546585 105546805 -34769960 - AluJb SINE Alu -8 304 85 2069 121 13 0 chr10 105546827 105547134 -34769631 + AluSx SINE Alu 1 311 -1 206 62 31 0 chr10 105547139 105547171 -34769594 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 296 308 43 17 chr10 105547386 105547503 -34769262 - L2 LINE L2 -230 3042 2923 25 0 0 0 chr10 105548075 105548100 -34768665 + GC_rich Low_complexity Low_complexity 1 25 0 204 170 19 38 chr10 105549020 105549073 -34767692 + CT-rich Low_complexity Low_complexity 2 53 0 297 294 103 37 chr10 105549221 105549357 -34767408 + MIR3 SINE MIR 7 151 -57 207 0 0 0 chr10 105549506 105549529 -34767236 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 183 260 26 52 chr10 105550731 105550808 -34765957 + MIR SINE MIR 108 182 -80 312 274 140 27 chr10 105551078 105551251 -34765514 - MIR SINE MIR -67 141 1 318 106 0 0 chr10 105551283 105551330 -34765435 + (CA)n Simple_repeat Simple_repeat 2 48 0 445 178 357 8 chr10 105551769 105551898 -34764867 - MER96 DNA MER1_type? 0 175 2 299 262 32 56 chr10 105551899 105552025 -34764740 + L3 LINE CR1 1298 1420 -157 253 271 32 97 chr10 105552302 105552457 -34764308 + L2 LINE L2 3164 3308 -5 2188 115 23 0 chr10 105552891 105553195 -34763570 + AluSx SINE Alu 2 312 0 589 334 58 47 chr10 105554606 105555055 -34761710 - L2 LINE L2 0 3272 2819 205 248 165 50 chr10 105555351 105555472 -34761293 - L2 LINE L2 0 3272 3138 24 53 0 0 chr10 105555689 105555727 -34761038 + AT_rich Low_complexity Low_complexity 1 38 0 641 259 32 5 chr10 105555773 105555962 -34760803 - MIR SINE MIR -56 206 13 261 180 62 195 chr10 105556624 105556752 -34760013 - MER94 DNA DNA -23 111 1 276 77 0 0 chr10 105557035 105557074 -34759691 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 817 127 0 0 chr10 105557077 105557195 -34759570 - FLAM_C SINE Alu -25 118 1 362 311 157 43 chr10 105557219 105557586 -34759179 - L2 LINE L2 -914 2400 1946 1994 111 0 0 chr10 105557586 105557857 -34758908 - AluSx SINE Alu -4 308 38 362 311 157 43 chr10 105557857 105558051 -34758714 - L2 LINE L2 -1368 1946 1775 2063 105 0 37 chr10 105558059 105558382 -34758383 + AluJb SINE Alu 1 311 -1 279 171 0 171 chr10 105559427 105559469 -34757296 - MLT1A1 LTR MaLR -103 262 214 264 30 0 0 chr10 105559469 105559502 -34757263 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 2165 88 11 0 chr10 105559512 105559797 -34756968 - AluSq SINE Alu -23 290 3 279 171 0 171 chr10 105559797 105559854 -34756911 - MLT1A1 LTR MaLR -161 204 171 1340 175 8 8 chr10 105559931 105560188 -34756577 - L1MD3 LINE L1 -10 7985 7729 1008 294 53 3 chr10 105560184 105560545 -34756220 - L1ME4a LINE L1 -210 5911 5533 * 225 324 0 0 chr10 105561580 105561651 -34755114 - MER91A DNA MER1_type -3 193 123 532 245 0 88 chr10 105561754 105561970 -34754795 + L2 LINE L2 3117 3313 0 835 155 75 43 chr10 105562129 105562290 -34754475 - AluJo SINE Alu 0 302 137 1386 108 10 0 chr10 105562293 105562496 -34754269 - AluSg/x SINE Alu -4 306 102 1230 128 11 0 chr10 105562496 105562675 -34754090 - AluSx SINE Alu -131 181 1 871 160 0 0 chr10 105562675 105562806 -34753959 - AluJo SINE Alu -170 132 2 1577 203 26 40 chr10 105563079 105563141 -34753624 - MLT1A1 LTR MaLR -3 362 301 1533 174 0 36 chr10 105563141 105563484 -34753281 - AluJb SINE Alu 0 312 1 1577 203 26 40 chr10 105563484 105563582 -34753183 - MLT1A1 LTR MaLR -64 301 203 2179 125 0 0 chr10 105563582 105563893 -34752872 - AluSx SINE Alu -1 311 1 1577 203 26 40 chr10 105563893 105564080 -34752685 - MLT1A1 LTR MaLR -162 203 19 978 147 51 17 chr10 105564229 105564389 -34752376 - AluSg/x SINE Alu -10 300 132 2335 93 0 6 chr10 105564389 105564700 -34752065 - AluSx SINE Alu -3 309 1 978 147 51 17 chr10 105564700 105564716 -34752049 - AluSg/x SINE Alu -178 132 118 224 345 84 17 chr10 105566073 105566192 -34750573 + L2 LINE L2 3186 3312 -1 2217 116 0 3 chr10 105567182 105567492 -34749273 - AluSg SINE Alu -1 309 1 959 112 60 146 chr10 105568907 105569076 -34747689 + MER33 DNA MER1_type 1 127 -2458 1974 154 0 6 chr10 105569076 105569388 -34747377 - AluJo SINE Alu 0 312 3 959 112 60 146 chr10 105569388 105569526 -34747239 + MER33 DNA MER1_type 127 275 -49 453 81 0 0 chr10 105569526 105569588 -34747177 - Alu SINE Alu -13 299 238 1381 272 62 14 chr10 105569699 105570133 -34746632 - MLT1J LTR MaLR -37 474 20 1116 153 0 6 chr10 105570249 105570479 -34746286 - AluSg/x SINE Alu 0 338 110 1795 140 10 10 chr10 105570487 105570780 -34745985 + AluSx SINE Alu 6 298 -14 2138 99 0 0 chr10 105570782 105571114 -34745651 + AluSx SINE Alu 1 332 0 2146 125 0 0 chr10 105571114 105571426 -34745339 + AluSx SINE Alu 1 312 0 500 97 0 0 chr10 105571435 105571536 -34745229 + Alu SINE Alu 223 323 0 370 282 117 0 chr10 105572061 105572164 -34744601 + L2 LINE L2 3158 3272 0 234 224 0 15 chr10 105573690 105573757 -34743008 - L1MA7 LINE L1 0 6291 6226 441 198 0 0 chr10 105574879 105574970 -34741795 + (TG)n Simple_repeat Simple_repeat 2 92 0 229 269 149 58 chr10 105575416 105575629 -34741136 + MIR SINE MIR 5 222 -40 2164 117 0 3 chr10 105575633 105575940 -34740825 + AluSx SINE Alu 1 306 -6 1991 116 0 70 chr10 105577128 105577320 -34739445 - AluSp SINE Alu -7 306 145 318 106 0 0 chr10 105577320 105577367 -34739398 + (TA)n Simple_repeat Simple_repeat 1 47 0 1991 116 0 70 chr10 105577367 105577503 -34739262 - AluSp SINE Alu -168 145 1 2382 68 10 3 chr10 105577512 105577821 -34738944 - AluY SINE Alu 0 311 1 261 0 0 0 chr10 105577821 105577850 -34738915 + (T)n Simple_repeat Simple_repeat 1 29 0 362 246 82 0 chr10 105577854 105577988 -34738777 + L1ME4a LINE L1 5973 6117 -4 393 22 0 0 chr10 105578663 105578709 -34738056 + (CA)n Simple_repeat Simple_repeat 1 46 0 245 289 94 50 chr10 105579181 105579382 -34737383 + L3 LINE CR1 1289 1498 -79 573 234 0 0 chr10 105579386 105579510 -34737255 - MER113 DNA MER1_type? -6 515 392 1883 153 16 0 chr10 105579617 105579924 -34736841 - AluSx SINE Alu 0 312 1 289 282 26 88 chr10 105580156 105580350 -34736415 - L1MB4 LINE L1 -221 5949 5745 2839 107 58 43 chr10 105580350 105580436 -34736329 + L1MB4 LINE L1 5688 5771 -412 1769 166 3 13 chr10 105580436 105580737 -34736028 + AluJb SINE Alu 1 298 -14 2839 107 58 43 chr10 105580737 105581083 -34735682 + L1MB3 LINE L1 5771 6130 -53 1943 110 7 3 chr10 105581083 105581374 -34735391 + AluSx SINE Alu 1 292 -20 2839 107 58 43 chr10 105581374 105581426 -34735339 + L1MB3 LINE L1 6130 6180 -3 289 282 26 88 chr10 105581426 105581458 -34735307 - L1MB4 LINE L1 -425 5745 5737 1354 218 33 41 chr10 105581458 105581852 -34734913 - MER113 DNA MER1_type? -127 394 4 215 322 197 11 chr10 105581981 105582164 -34734601 - L2 LINE L2 -220 3052 2836 677 148 139 0 chr10 105582171 105582286 -34734479 + FLAM_C SINE Alu 3 133 0 233 294 34 42 chr10 105582314 105582433 -34734332 - L2 LINE L2 -527 2787 2670 498 312 118 55 chr10 105582466 105582831 -34733934 - L2 LINE L2 -1 3312 2925 1839 137 11 7 chr10 105583032 105583317 -34733448 - AluJo SINE Alu -26 286 1 23 0 0 0 chr10 105583327 105583350 -34733415 + AT_rich Low_complexity Low_complexity 1 23 0 2220 82 14 0 chr10 105583353 105583645 -34733120 + AluSc SINE Alu 1 296 -13 2642 36 0 0 chr10 105584622 105584931 -34731834 - AluY SINE Alu -2 309 1 232 237 129 11 chr10 105585412 105585505 -34731260 - L2 LINE L2 -2 3311 3208 298 201 317 12 chr10 105586339 105586503 -34730262 + MIR SINE MIR 49 262 0 1594 133 31 0 chr10 105586518 105586604 -34730161 + AluJb SINE Alu 36 118 -194 273 29 0 0 chr10 105586604 105586638 -34730127 + (TAA)n Simple_repeat Simple_repeat 2 35 0 1971 133 3 3 chr10 105586638 105586932 -34729833 + AluSq SINE Alu 1 294 -19 1594 133 31 0 chr10 105586932 105587099 -34729666 + AluJb SINE Alu 117 298 -14 2110 113 3 0 chr10 105587099 105587391 -34729374 + AluSq SINE Alu 1 293 -20 663 288 68 5 chr10 105587704 105587909 -34728856 - MIR SINE MIR 0 262 45 216 301 0 27 chr10 105588012 105588085 -34728680 - L2 LINE L2 -5 3308 3238 489 209 38 38 chr10 105588864 105588916 -34727849 - L1ME3 LINE L1 0 6162 6111 2157 120 0 0 chr10 105588916 105589208 -34727557 - AluSx SINE Alu -20 292 1 489 209 38 38 chr10 105589208 105589313 -34727452 - L1ME3 LINE L1 -50 6112 6005 1226 197 137 0 chr10 105589363 105589626 -34727139 - AluJb SINE Alu -15 297 15 2325 80 3 10 chr10 105589682 105589994 -34726771 - AluY SINE Alu -1 310 1 1643 250 16 74 chr10 105589998 105590049 -34726716 - L1ME3A LINE L1 -179 5983 5931 1841 163 0 0 chr10 105590049 105590337 -34726428 + AluSx SINE Alu 1 288 -24 1827 143 0 48 chr10 105590345 105590660 -34726105 - AluJb SINE Alu -2 310 11 1643 250 16 74 chr10 105590660 105591104 -34725661 - L1ME3A LINE L1 -238 5924 5456 2053 135 10 0 chr10 105591104 105591408 -34725357 - AluSx SINE Alu -5 307 1 1865 127 3 24 chr10 105591410 105591728 -34725037 - AluSx SINE Alu 0 312 5 1643 250 16 74 chr10 105591728 105591742 -34725023 - L1ME3A LINE L1 -707 5455 5442 2289 94 3 0 chr10 105591742 105592040 -34724725 - AluSp SINE Alu -14 299 1 1643 250 16 74 chr10 105592040 105592139 -34724626 - L1ME3A LINE L1 -720 5442 5386 249 285 146 0 chr10 105592166 105592289 -34724476 - MIR SINE MIR -74 188 48 457 137 0 0 chr10 105592492 105592565 -34724200 + U3 snRNA snRNA 1 73 -144 26 50 0 0 chr10 105592565 105592605 -34724160 + AT_rich Low_complexity Low_complexity 1 40 0 689 101 0 9 chr10 105592650 105592759 -34724006 + (GGAA)n Simple_repeat Simple_repeat 1 108 0 1963 127 0 0 chr10 105592766 105593074 -34723691 - AluSx SINE Alu 0 308 1 278 130 0 0 chr10 105593095 105593141 -34723624 + MIR SINE MIR 114 159 -103 529 278 0 26 chr10 105593224 105593375 -34723390 - MER5B DNA MER1_type -31 147 1 201 307 22 39 chr10 105595028 105595207 -34721558 + (CATATA)n Simple_repeat Simple_repeat 5 180 0 414 0 0 0 chr10 105595317 105595363 -34721402 + (CA)n Simple_repeat Simple_repeat 1 46 0 330 284 8 39 chr10 105595602 105595729 -34721036 + G-rich Low_complexity Low_complexity 2 124 0 263 234 0 53 chr10 105597508 105597602 -34719163 + C-rich Low_complexity Low_complexity 5 93 0 616 238 12 25 chr10 105598313 105598473 -34718292 - MIR SINE MIR 0 262 105 * 715 239 11 109 chr10 105598467 105598539 -34718226 - MIR SINE MIR -5 257 179 2347 84 3 0 chr10 105598539 105598848 -34717917 - AluSp SINE Alu -2 311 2 715 239 11 109 chr10 105598848 105599059 -34717706 - MIR SINE MIR -83 179 2 453 250 244 0 chr10 105600584 105600756 -34716009 - MIR SINE MIR -6 256 43 180 0 0 0 chr10 105600788 105600808 -34715957 + (A)n Simple_repeat Simple_repeat 1 20 0 184 204 37 19 chr10 105602723 105602777 -34713988 - MER5B DNA MER1_type -123 55 1 454 327 0 13 chr10 105603511 105603670 -34713095 + C-rich Low_complexity Low_complexity 4 160 0 202 208 21 0 chr10 105604204 105604252 -34712513 + (CG)n Simple_repeat Simple_repeat 1 49 0 246 211 0 42 chr10 105604583 105604654 -34712111 + CT-rich Low_complexity Low_complexity 1 68 0 243 208 0 0 chr10 105604697 105604745 -34712020 - L2 LINE L2 -2 3311 3264 290 204 46 28 chr10 105604751 105604859 -34711906 + CT-rich Low_complexity Low_complexity 6 115 0 2299 103 3 0 chr10 105605367 105605679 -34711086 - AluSp SINE Alu 0 313 1 681 114 0 9 chr10 105605818 105605923 -34710842 - FLAM_C SINE Alu 0 143 40 2165 109 0 16 chr10 105606390 105606701 -34710064 + AluSx SINE Alu 1 306 -6 1588 193 58 52 chr10 105607499 105607790 -34708975 + MLT1A1 LTR MaLR 1 289 -76 249 33 0 0 chr10 105607790 105607820 -34708945 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1661 176 0 7 chr10 105607820 105608099 -34708666 - AluJb SINE Alu -35 277 1 1588 193 58 52 chr10 105608099 105608169 -34708596 + MLT1A1 LTR MaLR 288 365 0 2194 86 31 0 chr10 105608177 105608469 -34708296 + AluY SINE Alu 1 301 -10 414 196 149 9 chr10 105609032 105609139 -34707626 + MIR3 SINE MIR 81 202 -6 195 100 0 0 chr10 105610980 105611010 -34705755 + (TG)n Simple_repeat Simple_repeat 1 30 0 1624 184 0 29 chr10 105611598 105611913 -34704852 - AluJo SINE Alu -1 311 6 2255 98 7 0 chr10 105612008 105612314 -34704451 - AluSx SINE Alu -4 308 1 2337 178 42 26 chr10 105612314 105612769 -34703996 + MLT2B1 LTR ERVL 1 462 -58 191 88 29 0 chr10 105612778 105612812 -34703953 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 328 343 123 9 chr10 105612815 105613034 -34703731 - HAL1 LINE L1 -1218 1289 1046 241 204 0 0 chr10 105613036 105613090 -34703675 + MLT2B1 LTR ERVL 501 554 0 257 312 43 0 chr10 105614406 105614499 -34702266 - MIR3 SINE MIR -3 205 109 209 242 0 45 chr10 105615077 105615143 -34701622 + CT-rich Low_complexity Low_complexity 2 64 0 1074 126 0 6 chr10 105615673 105615832 -34700933 - AluJb SINE Alu -21 291 134 1356 112 11 5 chr10 105619124 105619311 -34697454 + U2 snRNA snRNA 1 188 0 490 331 17 0 chr10 105620783 105620968 -34695797 - MIR SINE MIR -14 248 62 1132 111 76 0 chr10 105621045 105621217 -34695548 + MER53 DNA DNA 1 185 -4 1718 89 125 18 chr10 105621593 105621873 -34694892 + AluSg SINE Alu 1 310 0 353 302 0 62 chr10 105622555 105622734 -34694031 + CT-rich Low_complexity Low_complexity 4 171 0 570 276 130 5 chr10 105623422 105623614 -34693151 + MIR SINE MIR 47 262 0 881 264 54 0 chr10 105623656 105623895 -34692870 + MIR SINE MIR 1 252 -10 2090 121 0 0 chr10 105624582 105624880 -34691885 - AluSx SINE Alu -14 298 1 546 289 68 130 chr10 105624988 105625538 -34691227 - L2 LINE L2 -84 3188 2606 1874 115 0 4 chr10 105625538 105625799 -34690966 - AluSq SINE Alu -53 260 1 2312 85 0 0 chr10 105625799 105626094 -34690671 - AluSx SINE Alu -17 295 1 546 289 68 130 chr10 105626094 105626214 -34690551 - L2 LINE L2 -665 2607 2481 2328 75 0 0 chr10 105626214 105626507 -34690258 - AluY SINE Alu -8 303 11 546 289 68 130 chr10 105626507 105626826 -34689939 - L2 LINE L2 -791 2481 2144 2375 89 0 13 chr10 105626826 105627142 -34689623 + AluSx SINE Alu 1 312 0 546 289 68 130 chr10 105627142 105627289 -34689476 - L2 LINE L2 -1128 2144 1989 557 238 95 60 chr10 105627289 105627351 -34689414 + MER5B DNA MER1_type 2 60 -118 2355 69 0 7 chr10 105627351 105627655 -34689110 + AluY SINE Alu 1 302 -9 557 238 95 60 chr10 105627655 105627760 -34689005 + MER5B DNA MER1_type 60 175 -3 546 289 68 130 chr10 105627760 105627774 -34688991 - L2 LINE L2 -1283 1989 2127 1769 148 3 58 chr10 105627774 105628104 -34688661 + AluSx SINE Alu 1 312 0 546 289 68 130 chr10 105628104 105628261 -34688504 - L2 LINE L2 -1144 2128 1963 575 262 107 0 chr10 105628301 105628469 -34688296 - MIR SINE MIR -54 208 23 314 109 36 0 chr10 105628548 105628603 -34688162 + CT-rich Low_complexity Low_complexity 2 58 0 * 739 92 0 17 chr10 105628593 105628713 -34688052 + (TTCC)n Simple_repeat Simple_repeat 4 121 0 627 202 52 52 chr10 105629063 105629236 -34687529 + MER5B DNA MER1_type 1 173 -5 416 257 7 63 chr10 105629249 105629419 -34687346 + MIR SINE MIR 21 180 -63 345 24 0 0 chr10 105629687 105629729 -34687036 + (TG)n Simple_repeat Simple_repeat 2 43 0 2247 104 0 13 chr10 105630283 105630599 -34686166 + AluSx SINE Alu 1 312 0 340 318 64 0 chr10 105630873 105630983 -34685782 + L2 LINE L2 3154 3270 -2 1230 242 78 6 chr10 105632064 105632395 -34684370 - LTR16A LTR ERVL -5 445 91 301 300 23 12 chr10 105632466 105632561 -34684204 - MIR SINE MIR -61 147 58 387 0 0 0 chr10 105633341 105633384 -34683381 + (TG)n Simple_repeat Simple_repeat 1 43 0 2284 87 13 0 chr10 105633520 105633829 -34682936 - AluSp SINE Alu 0 313 1 719 316 81 63 chr10 105635074 105635889 -34680876 + L2 LINE L2 2444 3262 -10 2090 78 0 11 chr10 105635891 105636201 -34680564 + AluY SINE Alu 1 307 0 456 150 0 0 chr10 105636292 105636372 -34680393 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 537 246 22 8 chr10 105636374 105636508 -34680257 - L2 LINE L2 -1 3271 3136 382 201 214 63 chr10 105636729 105636888 -34679877 - MIR SINE MIR -10 252 70 210 283 0 0 chr10 105636874 105636920 -34679845 + L2 LINE L2 3268 3313 0 * 263 266 0 16 chr10 105636928 105636992 -34679773 - MIR SINE MIR -180 82 20 209 195 0 0 chr10 105637782 105637823 -34678942 + MIR SINE MIR 220 260 -2 2861 73 3 3 chr10 105638244 105638599 -34678166 + THE1A LTR MaLR 1 355 0 12158 95 6 0 chr10 105638599 105640169 -34676596 + THE1A-int LTR MaLR 1 1580 0 2847 68 8 3 chr10 105640169 105640522 -34676243 + THE1A LTR MaLR 1 355 0 333 0 0 0 chr10 105642889 105642919 -34673846 + (TG)n Simple_repeat Simple_repeat 1 30 -59 186 43 0 0 chr10 105642919 105642942 -34673823 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 333 0 0 0 chr10 105642941 105642978 -34673787 + (TG)n Simple_repeat Simple_repeat 2 38 0 333 0 0 0 chr10 105642942 105642978 -34673787 + (TG)n Simple_repeat Simple_repeat 29 89 0 2392 80 3 0 chr10 105645005 105645294 -34671471 + AluY SINE Alu 1 290 -21 1961 135 0 3 chr10 105645526 105645808 -34670957 - AluJb SINE Alu -3 309 29 1794 161 23 13 chr10 105645819 105645993 -34670772 - AluSx SINE Alu -5 307 127 2341 108 3 0 chr10 105645993 105646298 -34670467 - AluSx SINE Alu -6 306 1 1794 161 23 13 chr10 105646298 105646427 -34670338 - AluSx SINE Alu -185 127 1 2066 143 7 0 chr10 105647237 105647537 -34669228 + AluJb SINE Alu 1 302 -10 1437 138 160 33 chr10 105647884 105648159 -34668606 - AluJo SINE Alu -2 310 1 344 182 26 0 chr10 105648253 105648330 -34668435 - MIR SINE MIR -12 250 172 1872 92 0 75 chr10 105648392 105648673 -34668092 - AluSx SINE Alu -52 260 1 1977 128 26 0 chr10 105648679 105648983 -34667782 - AluSq SINE Alu -1 312 1 2429 89 0 6 chr10 105649037 105649351 -34667414 - AluSx SINE Alu 0 312 1 375 219 42 21 chr10 105649374 105649470 -34667295 - L1ME3A LINE L1 -8 6162 6065 21 0 0 0 chr10 105649818 105649839 -34666926 + AT_rich Low_complexity Low_complexity 1 21 0 924 118 0 30 chr10 105649846 105649981 -34666784 - AluJb SINE Alu -181 131 1 729 154 0 0 chr10 105650320 105650424 -34666341 + FLAM_A SINE Alu 5 108 -34 977 98 0 0 chr10 105650426 105650549 -34666216 - AluSg/x SINE Alu -14 296 174 1954 99 0 40 chr10 105650552 105650824 -34665941 - AluSq SINE Alu -52 261 1 2280 90 7 0 chr10 105651022 105651311 -34665454 - AluSg SINE Alu -19 291 1 249 108 0 0 chr10 105651376 105651413 -34665352 + (CAT)n Simple_repeat Simple_repeat 3 39 0 583 243 6 50 chr10 105651821 105652002 -34664763 + L1MC5 LINE L1 7734 7906 -55 2093 121 10 0 chr10 105652033 105652340 -34664425 + AluJb SINE Alu 1 310 -2 423 0 0 0 chr10 105652379 105652426 -34664339 + (TG)n Simple_repeat Simple_repeat 2 48 0 1897 106 60 28 chr10 105652508 105652790 -34663975 + AluSx SINE Alu 7 297 -15 647 191 0 0 chr10 105652811 105652921 -34663844 + FLAM_A SINE Alu 32 141 -1 25 0 0 0 chr10 105652951 105652976 -34663789 + AT_rich Low_complexity Low_complexity 1 25 0 1613 255 88 4 chr10 105653499 105653978 -34662787 + LTR33 LTR ERVL 3 521 0 1829 223 75 15 chr10 105654634 105655046 -34661719 + MLT1F LTR MaLR 106 542 0 1444 211 65 25 chr10 105655047 105655083 -34661682 + L1MC4 LINE L1 7474 7507 -535 2248 118 0 0 chr10 105655083 105655387 -34661378 + AluSq SINE Alu 1 304 -9 1444 211 65 25 chr10 105655387 105655706 -34661059 + L1MC4 LINE L1 7507 7843 -199 1934 67 60 53 chr10 105655706 105655991 -34660774 + AluY SINE Alu 1 287 -24 2466 46 0 0 chr10 105655997 105656303 -34660462 + AluY SINE Alu 1 306 0 2279 76 10 0 chr10 105656333 105656622 -34660143 - AluSp SINE Alu -21 292 1 1877 136 13 31 chr10 105656736 105657053 -34659712 - AluJo SINE Alu -1 311 1 2202 114 27 0 chr10 105657056 105657355 -34659410 - AluSq SINE Alu -6 307 1 606 247 201 5 chr10 105657716 105657935 -34658830 - MIR SINE MIR 0 262 1 1444 158 0 14 chr10 105658085 105658306 -34658459 - MER20 DNA MER1_type 0 219 2 2398 87 0 0 chr10 105658341 105658639 -34658126 - AluSq SINE Alu -15 298 1 1003 131 67 30 chr10 105658641 105658842 -34657923 + L1MA7 LINE L1 5607 5816 -350 2345 101 0 0 chr10 105658866 105659172 -34657593 - AluY SINE Alu -5 306 1 2167 72 18 14 chr10 105659173 105659345 -34657420 - AluSc SINE Alu -7 302 127 2599 30 0 10 chr10 105659345 105659650 -34657115 - AluY SINE Alu -9 302 1 2167 72 18 14 chr10 105659650 105659755 -34657010 - AluSc SINE Alu -182 127 24 440 68 0 0 chr10 105659767 105659826 -34656939 + L1MA7 LINE L1 5774 5832 -459 1175 161 18 0 chr10 105659832 105660049 -34656716 + L1MA7 LINE L1 6069 6289 -2 2049 114 17 17 chr10 105660208 105660506 -34656259 + AluSg SINE Alu 1 298 -12 322 258 91 8 chr10 105660587 105660719 -34656046 + L2 LINE L2 1537 1679 -1635 895 179 36 140 chr10 105660754 105660835 -34655930 - L1MC4 LINE L1 -5 8037 7949 2104 142 0 3 chr10 105660835 105661137 -34655628 - AluSx SINE Alu -11 301 1 895 179 36 140 chr10 105661137 105661441 -34655324 - L1MC4 LINE L1 -93 7949 7692 22 0 0 0 chr10 105661441 105661463 -34655302 + AT_rich Low_complexity Low_complexity 1 22 0 1081 91 0 0 chr10 105661475 105661607 -34655158 + AluSq/x SINE Alu 5 136 -177 2379 73 0 0 chr10 105661607 105661894 -34654871 + AluY SINE Alu 1 287 -24 480 198 104 0 chr10 105661901 105662007 -34654758 - FLAM_C SINE Alu -16 117 1 317 233 47 0 chr10 105662066 105662152 -34654613 - L1MC4 LINE L1 -366 7676 7587 854 292 64 86 chr10 105662320 105662493 -34654272 + L2 LINE L2 2018 2193 -1121 2181 133 3 0 chr10 105662493 105662802 -34653963 - AluSx SINE Alu -2 310 1 854 292 64 86 chr10 105662802 105663430 -34653335 + L2 LINE L2 2193 2801 -513 198 118 0 0 chr10 105663698 105663732 -34653033 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 199 303 71 30 chr10 105663766 105663865 -34652900 - L3 LINE CR1 -658 919 817 271 204 19 0 chr10 105663947 105664001 -34652764 + L2 LINE L2 3156 3210 -62 574 85 106 0 chr10 105664035 105664129 -34652636 - L1PB3 LINE L1 -2 6152 6049 2352 86 0 3 chr10 105664311 105664613 -34652152 - AluSx SINE Alu -11 301 1 180 0 0 0 chr10 105664624 105664644 -34652121 + (TTG)n Simple_repeat Simple_repeat 2 21 0 415 163 0 87 chr10 105664650 105664742 -34652023 - L1ME LINE L1 -347 5819 5736 334 155 17 0 chr10 105664743 105664801 -34651964 - MLT1E3 LTR MaLR 0 624 566 2002 83 65 4 chr10 105667617 105667893 -34648872 - AluSc SINE Alu -15 294 2 2492 57 7 0 chr10 105668445 105668746 -34648019 + AluY SINE Alu 1 303 -8 2517 70 0 3 chr10 105668756 105669057 -34647708 + AluSc SINE Alu 1 300 -9 1318 162 57 47 chr10 105669702 105669998 -34646767 - AluJo SINE Alu -13 299 1 247 167 121 0 chr10 105670148 105670214 -34646551 - MLT1G1 LTR MaLR -15 580 507 437 258 71 116 chr10 105670232 105670542 -34646223 - MLT1G1 LTR MaLR -243 341 4 1170 122 0 39 chr10 105671019 105671190 -34645575 - AluSg/x SINE Alu -12 300 135 2194 125 3 0 chr10 105671190 105671495 -34645270 - AluSp SINE Alu -7 306 1 2065 137 0 0 chr10 105671666 105671950 -34644815 - AluSx SINE Alu -28 284 1 2269 107 10 0 chr10 105671966 105672266 -34644499 - AluSx SINE Alu -9 303 1 529 200 8 56 chr10 105672266 105672391 -34644374 - FLAM_A SINE Alu -14 119 1 1532 138 4 4 chr10 105672470 105672701 -34644064 - AluJo SINE Alu -81 231 1 2257 109 0 0 chr10 105672708 105673001 -34643764 - AluY SINE Alu -18 293 1 2147 122 7 0 chr10 105673556 105673852 -34642913 - AluSc SINE Alu -11 298 1 2490 64 3 0 chr10 105673995 105674290 -34642475 - AluSp SINE Alu -17 296 1 1066 219 110 31 chr10 105674346 105674665 -34642100 - MER2 DNA MER2_type 0 345 2 802 203 40 54 chr10 105674669 105674891 -34641874 - MIR SINE MIR -15 247 29 1490 107 0 5 chr10 105675045 105675250 -34641515 - AluSg/x SINE Alu -3 309 106 243 200 18 0 chr10 105676280 105676335 -34640430 + L1ME4a LINE L1 5985 6040 -81 1644 38 0 0 chr10 105676445 105676631 -34640134 - U2 snRNA snRNA -2 186 1 2381 98 3 0 chr10 105676662 105676968 -34639797 - AluSp SINE Alu -6 307 1 277 113 0 38 chr10 105676969 105677022 -34639743 - Alu SINE Alu -1 301 251 2201 128 0 3 chr10 105677061 105677367 -34639398 - AluSq SINE Alu -3 310 6 1006 102 0 13 chr10 105678362 105678677 -34638088 + (TA)n Simple_repeat Simple_repeat 1 311 0 2138 86 3 17 chr10 105678677 105678967 -34637798 - AluSc SINE Alu -23 286 1 1871 220 43 55 chr10 105679025 105679600 -34637165 - L1ME3A LINE L1 -8 6162 5598 2538 160 19 16 chr10 105679600 105680031 -34636734 + MSTB1 LTR MaLR 1 432 0 1871 220 43 55 chr10 105680031 105680060 -34636705 - L1ME3A LINE L1 -572 5598 5570 1167 167 0 5 chr10 105680063 105680255 -34636510 - AluJo SINE Alu 0 312 122 431 225 40 128 chr10 105680266 105680332 -34636433 - L1ME3A LINE L1 -623 5539 5469 1982 147 0 0 chr10 105680332 105680617 -34636148 + AluSx SINE Alu 1 285 -27 431 225 40 128 chr10 105680617 105680812 -34635953 - L1ME3A LINE L1 -693 5469 5304 686 162 7 37 chr10 105680815 105680951 -34635814 - FRAM SINE Alu -17 159 28 1822 204 150 21 chr10 105680985 105681465 -34635300 - L1MC4 LINE L1 -1030 7012 6471 1966 119 27 14 chr10 105681715 105682009 -34634756 - AluJb SINE Alu -14 298 1 225 94 0 0 chr10 105682197 105682229 -34634536 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 1316 153 4 46 chr10 105682234 105682475 -34634290 - AluJb SINE Alu -81 231 1 207 204 0 0 chr10 105682499 105682548 -34634217 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2263 156 92 13 chr10 105682563 105682760 -34634005 - L1MB2 LINE L1 -2 6169 5989 2091 90 39 39 chr10 105682760 105683072 -34633693 - AluSx SINE Alu 0 312 1 2263 156 92 13 chr10 105683072 105683341 -34633424 - L1MB2 LINE L1 -182 5989 5666 1341 218 83 91 chr10 105683341 105683447 -34633318 - L1MB2 LINE L1 -1107 5039 4934 559 168 30 0 chr10 105683447 105683548 -34633217 - U13 snRNA snRNA 0 104 1 1341 218 83 91 chr10 105683548 105683842 -34632923 - L1MB2 LINE L1 -1212 4934 4639 2391 88 7 3 chr10 105683842 105684149 -34632616 - AluSg SINE Alu -2 308 1 1341 218 83 91 chr10 105684149 105684178 -34632587 - L1MB2 LINE L1 -1507 4639 4611 2193 89 24 0 chr10 105684178 105684471 -34632294 + AluSx SINE Alu 1 300 -12 1341 218 83 91 chr10 105684471 105684700 -34632065 - L1MB2 LINE L1 -1535 4611 4384 2469 75 0 22 chr10 105685231 105685549 -34631216 + AluY SINE Alu 1 311 0 2238 31 4 0 chr10 105685685 105685946 -34630819 - L1P1 LINE L1 -528 5627 5366 4123 17 0 0 chr10 105685946 105686391 -34630374 + L1PA2 LINE L1 5692 6155 0 2287 114 71 57 chr10 105686683 105687105 -34629660 + MSTA LTR MaLR 1 428 0 214 348 50 44 chr10 105687309 105687490 -34629275 - MER5A DNA MER1_type -1 188 7 2003 131 3 0 chr10 105687639 105687922 -34628843 + AluSx SINE Alu 1 284 -28 2632 203 109 23 chr10 105688535 105689220 -34627545 - L1ME1 LINE L1 -17 6149 5406 2280 101 27 0 chr10 105690116 105690412 -34626353 - AluSx SINE Alu -8 304 1 485 246 36 45 chr10 105691731 105691893 -34624872 + MIR SINE MIR 45 208 -54 21 0 0 0 chr10 105691971 105691992 -34624773 + AT_rich Low_complexity Low_complexity 1 21 0 455 158 0 0 chr10 105692078 105692160 -34624605 - SVA Other Other -783 603 522 326 270 34 112 chr10 105692300 105692365 -34624400 + MIR SINE MIR 7 75 -187 1397 189 104 9 chr10 105692365 105692683 -34624082 - MER7A DNA MER2_type 0 346 1 326 270 34 112 chr10 105692683 105692735 -34624030 + MIR SINE MIR 75 129 -133 888 237 47 20 chr10 105692735 105692988 -34623777 - MIR SINE MIR 0 262 3 326 270 34 112 chr10 105692988 105693102 -34623663 + MIR SINE MIR 129 221 -41 1956 229 106 49 chr10 105693264 105693566 -34623199 - L1MC4 LINE L1 -28 8014 7731 2474 87 0 0 chr10 105693566 105693878 -34622887 - AluSx SINE Alu 0 312 1 1956 229 106 49 chr10 105693878 105694353 -34622412 - L1MC4 LINE L1 -311 7731 7162 1428 127 38 0 chr10 105694653 105694866 -34621899 - AluJb SINE Alu -6 306 86 494 194 58 0 chr10 105694866 105694969 -34621796 - MER5A DNA MER1_type -80 109 1 282 116 0 0 chr10 105695093 105695136 -34621629 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 560 263 0 0 chr10 105695136 105695254 -34621511 - FRAM SINE Alu -53 123 6 670 165 0 41 chr10 105695465 105695609 -34621156 - FLAM_A SINE Alu 0 142 4 836 143 0 8 chr10 105696536 105696669 -34620096 + FLAM_C SINE Alu 1 132 -11 1658 137 26 26 chr10 105696686 105696992 -34619773 + AluY SINE Alu 6 311 0 255 203 0 0 chr10 105697160 105697229 -34619536 + T-rich Low_complexity Low_complexity 1 69 0 257 204 20 0 chr10 105697364 105697413 -34619352 - Charlie4 DNA MER1_type -1908 53 4 21 0 0 0 chr10 105697475 105697496 -34619269 + AT_rich Low_complexity Low_complexity 1 21 0 264 318 79 40 chr10 105698210 105698336 -34618429 - MIR SINE MIR -58 150 20 751 298 48 6 chr10 105698412 105698764 -34618001 - L1M4 LINE L1 -1033 5113 4747 22 35 0 0 chr10 105698783 105698812 -34617953 + AT_rich Low_complexity Low_complexity 1 29 0 1156 120 78 0 chr10 105698812 105699029 -34617736 - L1MA5A LINE L1 -17 6280 6047 1188 104 12 0 chr10 105699124 105699287 -34617478 - AluSg/x SINE Alu -12 298 134 2324 91 0 0 chr10 105699289 105699585 -34617180 - AluSx SINE Alu -16 296 1 1480 184 46 3 chr10 105699758 105699926 -34616839 - AluJo SINE Alu -12 300 114 298 0 48 0 chr10 105699926 105699968 -34616797 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1480 184 46 3 chr10 105699968 105700082 -34616683 - AluJo SINE Alu -198 114 6 1850 158 0 3 chr10 105700101 105700386 -34616379 - AluJb SINE Alu -28 284 1 1084 310 149 48 chr10 105700491 105701206 -34615559 + L2 LINE L2 2116 3060 -253 1874 149 3 20 chr10 105701206 105701508 -34615257 - AluJo SINE Alu -3 309 13 1084 310 149 48 chr10 105701508 105701777 -34614988 + L2 LINE L2 3060 3300 -13 2318 77 17 0 chr10 105701930 105702227 -34614538 - AluY SINE Alu -9 302 1 213 39 0 0 chr10 105702358 105702384 -34614381 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 409 237 65 65 chr10 105754347 105754533 -34562232 - L1M4 LINE L1 -725 5528 5343 234 0 0 0 chr10 105755085 105755111 -34561654 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 346 189 14 14 chr10 105757369 105757443 -34559322 + AluJ/FLAM SINE Alu 2 75 -227 2335 226 80 43 chr10 105758027 105758427 -34558338 - L1M4 LINE L1 -4121 2275 1891 2291 94 3 0 chr10 105758427 105758724 -34558041 - AluY SINE Alu -13 298 1 2335 226 80 43 chr10 105758724 105758923 -34557842 - L1M4 LINE L1 -4505 1891 1701 1484 192 17 26 chr10 105758923 105759225 -34557540 - AluJo SINE Alu -13 299 1 2335 226 80 43 chr10 105759225 105759291 -34557474 - L1M4 LINE L1 -4695 1701 1639 1587 159 37 10 chr10 105759291 105759586 -34557179 + AluJo SINE Alu 1 303 -9 2335 226 80 43 chr10 105759586 105759796 -34556969 - L1M4 LINE L1 -4757 1639 1366 361 276 8 15 chr10 105759787 105759921 -34556844 + L1MEc LINE L1 2277 2409 -3987 * 2214 136 46 14 chr10 105759923 105760290 -34556475 + MLT1B LTR MaLR 1 379 -11 3355 232 39 33 chr10 105760298 105760936 -34555829 + L1MEc LINE L1 2366 3014 -3201 388 66 0 0 chr10 105760936 105760997 -34555768 - L1MA1 LINE L1 0 6302 6242 3355 232 39 33 chr10 105760997 105761357 -34555408 + L1MEc LINE L1 3014 3370 -2845 652 254 45 5 chr10 105761392 105761593 -34555172 + L1MEc LINE L1 3569 3777 -2438 651 183 17 0 chr10 105761595 105761710 -34555055 + Tigger5 DNA MER2_type 2207 2323 0 635 140 40 0 chr10 105761732 105761832 -34554933 + AluSp/q SINE Alu 198 301 -12 213 39 0 0 chr10 105761837 105761863 -34554902 + (T)n Simple_repeat Simple_repeat 1 26 0 2434 87 0 0 chr10 105766653 105766952 -34549813 + AluSc SINE Alu 1 299 -10 1634 114 21 30 chr10 105767107 105767344 -34549421 - AluSx SINE Alu -77 235 1 242 229 128 0 chr10 105767344 105767453 -34549312 - L1M LINE L1 -2383 5425 5303 1841 161 3 20 chr10 105767553 105767857 -34548908 - AluJo SINE Alu -13 299 1 3464 120 11 35 chr10 105767906 105768446 -34548319 - MER1A DNA MER1_type 0 527 1 475 259 99 84 chr10 105768460 105769267 -34547498 - L1M4 LINE L1 -944 5202 4380 2107 115 19 25 chr10 105769267 105769581 -34547184 - AluSx SINE Alu 0 312 1 475 259 99 84 chr10 105769581 105769629 -34547136 - L1M4 LINE L1 -1766 4380 4334 201 281 35 0 chr10 105769736 105769793 -34546972 - MIR SINE MIR 0 262 204 2350 59 9 0 chr10 105769804 105770247 -34546518 - L1PA7 LINE L1 -4 6150 5543 461 302 14 7 chr10 105770247 105770386 -34546379 - MIR SINE MIR -72 190 51 249 265 0 0 chr10 105770440 105770508 -34546257 - L1M4 LINE L1 -1871 4275 4208 195 42 0 0 chr10 105771176 105771200 -34545565 + (TG)n Simple_repeat Simple_repeat 2 25 0 2413 88 0 0 chr10 105771485 105771781 -34544984 + AluY SINE Alu 1 296 -15 716 233 159 16 chr10 105771793 105772102 -34544663 - L1ME4a LINE L1 -3 6118 5766 664 171 0 95 chr10 105773447 105773632 -34543133 + L1MB8 LINE L1 6007 6178 0 462 257 129 26 chr10 105773866 105774031 -34542734 - L1ME4a LINE L1 -211 5910 5763 1824 169 0 19 chr10 105774031 105774344 -34542421 - AluJo SINE Alu -5 307 1 462 257 129 26 chr10 105774344 105774481 -34542284 - L1ME4a LINE L1 -358 5763 5577 2289 105 0 22 chr10 105776565 105776878 -34539887 + AluSx SINE Alu 1 306 -6 2278 90 0 0 chr10 105777479 105777758 -34539007 + AluSg SINE Alu 1 279 -31 180 244 22 0 chr10 105780116 105780161 -34536604 + L2 LINE L2 3218 3263 -50 251 273 13 0 chr10 105780185 105780262 -34536503 + GA-rich Low_complexity Low_complexity 2 79 0 459 52 0 0 chr10 105780610 105780668 -34536097 + (TG)n Simple_repeat Simple_repeat 1 58 0 2276 111 0 0 chr10 105785121 105785418 -34531347 + AluSx SINE Alu 3 299 -13 2246 110 7 10 chr10 105786639 105786938 -34529827 + AluSq SINE Alu 1 298 -15 294 174 0 0 chr10 105787328 105787374 -34529391 - Alu SINE Alu -19 283 238 4069 202 121 80 chr10 105787376 105788552 -34528213 - L1ME1 LINE L1 -320 5846 4720 579 215 0 0 chr10 105788552 105788659 -34528106 - FLAM_C SINE Alu -25 118 12 4069 202 121 80 chr10 105788659 105789131 -34527634 - L1ME1 LINE L1 -1446 4720 4269 2487 72 0 3 chr10 105789131 105789435 -34527330 - AluY SINE Alu -8 303 1 4069 202 121 80 chr10 105789435 105790295 -34526470 - L1ME1 LINE L1 -1897 4269 2968 827 198 32 79 chr10 105790294 105790460 -34526305 - L1ME1 LINE L1 -3496 2650 2478 * 1619 152 61 11 chr10 105790460 105790737 -34526028 - AluJb SINE Alu -21 291 1 2333 100 0 3 chr10 105790747 105791057 -34525708 - AluSq SINE Alu -4 309 1 827 198 32 79 chr10 105791057 105791157 -34525608 - L1ME1 LINE L1 -3677 2469 2386 819 329 46 26 chr10 105791325 105791784 -34524981 + L1MC4a LINE L1 5437 5904 -1904 301 194 129 0 chr10 105793305 105793398 -34523367 + MLT1K LTR MaLR 484 588 0 1710 148 0 77 chr10 105793897 105794234 -34522531 - AluSx SINE Alu -1 311 1 2268 83 0 0 chr10 105794261 105794549 -34522216 - AluSx SINE Alu -24 288 1 1956 150 3 0 chr10 105795306 105795606 -34521159 + AluSx SINE Alu 4 304 -8 812 144 0 0 chr10 105795687 105795805 -34520960 + FLAM_C SINE Alu 1 118 -25 25 0 0 0 chr10 105795805 105795830 -34520935 + AT_rich Low_complexity Low_complexity 1 25 0 188 365 63 8 chr10 105799020 105799146 -34517619 - L2 LINE L2 -1 3271 3139 688 291 95 8 chr10 105799243 105799484 -34517281 + MIR SINE MIR 1 262 0 2166 99 7 0 chr10 105802558 105802861 -34513904 - AluY SINE Alu -6 305 1 365 324 62 45 chr10 105804088 105804264 -34512501 + MIR SINE MIR 80 258 -4 267 359 119 11 chr10 105804294 105804422 -34512343 + L2 LINE L2 1984 2097 -1217 1606 148 23 46 chr10 105804422 105804774 -34511991 - AluJb SINE Alu 0 312 1 267 359 119 11 chr10 105804774 105805007 -34511758 + L2 LINE L2 2097 2384 -930 193 0 94 0 chr10 105806688 105806720 -34510045 + T-rich Low_complexity Low_complexity 1 35 0 243 204 92 51 chr10 105810355 105810453 -34506312 - MIR3 SINE MIR -23 185 84 184 270 68 27 chr10 105812144 105812218 -34504547 + L2 LINE L2 3193 3269 -44 207 191 0 21 chr10 105813383 105813430 -34503335 + (CCCCAG)n Simple_repeat Simple_repeat 6 51 0 290 329 60 30 chr10 105814368 105814535 -34502230 + MIR SINE MIR 48 219 -43 1805 96 82 7 chr10 105814919 105815199 -34501566 + AluSx SINE Alu 1 301 -11 440 171 57 23 chr10 105815210 105815298 -34501467 + AluJ/FLAM SINE Alu 3 93 -219 333 235 153 0 chr10 105816144 105816242 -34500523 + MIR SINE MIR 71 183 -79 1772 158 3 7 chr10 105816293 105816590 -34500175 + AluJb SINE Alu 8 303 -9 228 204 0 0 chr10 105817516 105817565 -34499200 - L2 LINE L2 0 3313 3265 204 276 0 0 chr10 105817789 105817847 -34498918 - L3b LINE CR1 -184 1399 1342 1954 114 0 27 chr10 105818070 105818369 -34498396 - AluSg SINE Alu -19 291 1 204 351 13 0 chr10 105818716 105818793 -34497972 + (CGTG)n Simple_repeat Simple_repeat 4 81 0 231 341 57 8 chr10 105819581 105819704 -34497061 - L2 LINE L2 -10 3303 3175 553 272 29 0 chr10 105820155 105820291 -34496474 + MER45A DNA AcHobo 39 178 0 291 180 0 0 chr10 105820606 105820656 -34496109 + L2 LINE L2 3221 3270 -2 192 289 0 0 chr10 105820982 105821027 -34495738 + MIR SINE MIR 103 147 -115 204 125 0 0 chr10 105822495 105822527 -34494238 + (CACTC)n Simple_repeat Simple_repeat 4 35 0 560 272 50 20 chr10 105823927 105824129 -34492636 + MIR SINE MIR 48 255 -7 2246 80 7 7 chr10 105824274 105824576 -34492189 + AluSq SINE Alu 1 302 -11 1424 217 65 11 chr10 105825020 105825509 -34491256 - MLT1E2 LTR MaLR -7 619 39 395 299 36 7 chr10 105825568 105825705 -34491060 + MIR3 SINE MIR 54 194 -14 292 247 111 0 chr10 105826723 105826804 -34489961 - L2 LINE L2 0 3272 3183 869 240 32 20 chr10 105826843 105826981 -34489784 + MIR SINE MIR 14 158 -104 1986 131 3 0 chr10 105826981 105827279 -34489486 + AluSx SINE Alu 1 299 -13 869 240 32 20 chr10 105827279 105827386 -34489379 + MIR SINE MIR 158 262 0 299 167 0 17 chr10 105828036 105828096 -34488669 - L2 LINE L2 -1 3312 3254 219 288 96 0 chr10 105828781 105828854 -34487911 + MIR SINE MIR 102 181 -81 911 93 0 43 chr10 105829374 105829513 -34487252 + FLAM_C SINE Alu 1 133 0 2077 110 3 0 chr10 105829776 105830068 -34486697 + AluSc SINE Alu 1 293 -16 3365 185 105 16 chr10 105832283 105832443 -34484322 - L1MD2 LINE L1 0 6359 6215 324 64 0 0 chr10 105832443 105832490 -34484275 + (TG)n Simple_repeat Simple_repeat 2 48 0 3365 185 105 16 chr10 105832490 105833146 -34483619 - L1MD2 LINE L1 -144 6215 5470 1092 162 51 5 chr10 105833211 105833408 -34483357 - AluJo SINE Alu -92 220 15 513 151 117 62 chr10 105833421 105833600 -34483165 - L1MD2 LINE L1 -873 5486 5298 640 170 0 0 chr10 105833601 105833701 -34483064 - U6 snRNA snRNA -6 101 2 1053 193 0 18 chr10 105833701 105833805 -34482960 - L1MD2 LINE L1 -844 5302 5198 2412 77 0 3 chr10 105833805 105834115 -34482650 - AluY SINE Alu -2 309 1 1053 193 0 18 chr10 105834115 105834255 -34482510 - L1MD2 LINE L1 -948 5198 5068 581 313 109 8 chr10 105834520 105834776 -34481989 - L3 LINE CR1 -129 1448 1167 363 256 90 23 chr10 105834823 105834956 -34481809 + MIR SINE MIR 109 250 -12 1862 161 0 3 chr10 105835018 105835316 -34481449 - AluJo SINE Alu -15 297 1 800 162 0 29 chr10 105835784 105835920 -34480845 + FLAM_C SINE Alu 2 133 0 2295 89 0 3 chr10 105836877 105837181 -34479584 - AluY SINE Alu -6 305 3 184 356 83 35 chr10 105837990 105838220 -34478545 + L2 LINE L2 2813 3053 -219 630 255 28 0 chr10 105839325 105839470 -34477295 + MIR SINE MIR 111 259 -3 191 277 106 11 chr10 105839638 105839732 -34477033 + MIR3 SINE MIR 65 167 -41 247 317 48 93 chr10 105839903 105840237 -34476528 + L2 LINE L2 2928 3246 -26 192 136 0 45 chr10 105841619 105841663 -34475102 - MER5A DNA MER1_type -76 113 72 216 171 0 0 chr10 105843722 105843757 -34473008 + (TG)n Simple_repeat Simple_repeat 1 35 0 2431 94 3 0 chr10 105846277 105846586 -34470179 - AluSx SINE Alu -2 310 1 335 299 37 28 chr10 105847276 105847383 -34469382 - MIR3 SINE MIR -54 154 47 21 0 0 0 chr10 105848442 105848463 -34468302 + AT_rich Low_complexity Low_complexity 1 21 0 275 319 66 0 chr10 105848514 105848605 -34468160 - MIR3 SINE MIR -52 156 60 281 297 0 0 chr10 105849872 105849946 -34466819 - L2 LINE L2 -11 3261 3188 1029 87 0 0 chr10 105849946 105850072 -34466693 + FLAM_C SINE Alu 1 126 -17 2173 126 3 0 chr10 105850104 105850397 -34466368 + AluSx SINE Alu 3 296 -16 533 234 125 18 chr10 105850536 105850758 -34466007 - MIR SINE MIR 0 262 22 329 216 23 45 chr10 105851010 105851098 -34465667 + MIR3 SINE MIR 85 170 -38 272 276 133 0 chr10 105851498 105851603 -34465162 - MER103 DNA DNA -45 121 3 270 272 228 6 chr10 105851701 105851863 -34464902 - MIR SINE MIR -16 246 49 392 180 0 56 chr10 105852452 105852510 -34464255 + MER72 LTR ERV1 594 654 -68 1501 204 0 14 chr10 105852510 105852794 -34463971 + AluJo SINE Alu 3 282 -30 2424 88 3 0 chr10 105852794 105853088 -34463677 - AluSx SINE Alu -17 295 1 392 180 0 56 chr10 105853088 105853117 -34463648 + MER72 LTR ERV1 652 677 -45 189 0 0 0 chr10 105853118 105853139 -34463626 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 338 145 48 0 chr10 105853139 105853201 -34463564 + MER72 LTR ERV1 635 699 -23 322 167 17 0 chr10 105854293 105854353 -34462412 - L2 LINE L2 -2 3311 3251 301 216 167 10 chr10 105854872 105854974 -34461791 - L2 LINE L2 -4 3268 3151 2447 81 16 0 chr10 105856816 105857123 -34459642 + AluSp SINE Alu 1 312 -1 624 289 56 22 chr10 105859218 105859450 -34457315 + MIR SINE MIR 21 260 -2 310 275 42 25 chr10 105861282 105861402 -34455363 + L2 LINE L2 2934 3055 -217 245 275 152 64 chr10 105861681 105861852 -34454913 + L2 LINE L2 3118 3303 -10 1211 147 5 0 chr10 105862087 105862285 -34454480 + L1MB3 LINE L1 5650 5848 -335 1219 134 16 0 chr10 105862475 105862669 -34454096 + L1MB3 LINE L1 5843 6039 -144 1061 156 38 0 chr10 105862670 105862830 -34453935 + FRAM SINE Alu 1 165 -11 854 107 40 0 chr10 105862830 105862980 -34453785 + L1MB3 LINE L1 6028 6183 0 213 261 130 0 chr10 105863095 105863164 -34453601 + L2 LINE L2 3202 3279 -34 2037 129 3 22 chr10 105863329 105863508 -34453257 - AluJb SINE Alu -1 311 139 2102 117 3 29 chr10 105863508 105863816 -34452949 - AluSx SINE Alu -12 300 1 2037 129 3 22 chr10 105863816 105863953 -34452812 - AluJb SINE Alu -173 139 1 595 266 0 26 chr10 105864492 105864646 -34452119 - MIR3 SINE MIR -15 193 44 321 263 63 0 chr10 105864665 105864760 -34452005 + MIR SINE MIR 106 206 -56 323 256 23 0 chr10 105864843 105864929 -34451836 + MIR3 SINE MIR 99 186 -22 2105 99 18 3 chr10 105866618 105866945 -34449820 + AluSx SINE Alu 1 331 0 302 248 171 9 chr10 105866961 105867066 -34449699 - L2 LINE L2 -3 3310 3189 249 169 2 0 chr10 105867632 105867679 -34449086 + Alu SINE Alu 129 170 -132 243 190 60 50 chr10 105867795 105867895 -34448870 + L1MC5 LINE L1 7806 7906 -55 631 201 0 36 chr10 105867905 105867923 -34448842 - AluJo SINE Alu -177 135 118 246 62 0 0 chr10 105867923 105867955 -34448810 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 631 201 0 36 chr10 105867955 105868075 -34448690 - AluJo SINE Alu -194 118 2 606 239 196 24 chr10 105868084 105868293 -34448472 + MIR SINE MIR 15 259 -3 198 103 0 0 chr10 105868303 105868332 -34448433 + (TGG)n Simple_repeat Simple_repeat 1 29 0 206 185 0 56 chr10 105868533 105868587 -34448178 + CT-rich Low_complexity Low_complexity 2 52 0 259 304 11 11 chr10 105869064 105869156 -34447609 + MER5B DNA MER1_type 1 92 -86 27 29 0 0 chr10 105869866 105869900 -34446865 + AT_rich Low_complexity Low_complexity 1 34 0 886 170 0 0 chr10 105870112 105870247 -34446518 + AluSq/x SINE Alu 1 135 -178 1515 127 0 9 chr10 105870248 105870461 -34446304 + AluSg/x SINE Alu 83 293 -17 257 288 136 8 chr10 105872248 105872366 -34444399 - MIR SINE MIR -67 195 63 1757 218 49 16 chr10 105875431 105875621 -34441144 + MLT1D LTR MaLR 1 183 -322 1800 133 6 94 chr10 105875621 105875960 -34440805 + AluJb SINE Alu 1 309 -3 1757 218 49 16 chr10 105875960 105876256 -34440509 + MLT1D LTR MaLR 183 503 -2 591 228 138 0 chr10 105879930 105880075 -34436690 + FRAM SINE Alu 1 162 -14 348 229 0 24 chr10 105881183 105881266 -34435499 + AluJb SINE Alu 56 136 -166 320 241 86 21 chr10 105881298 105881459 -34435306 - MIR SINE MIR -56 206 38 499 115 13 0 chr10 105881787 105881865 -34434900 + FLAM_A SINE Alu 43 121 -21 198 271 0 0 chr10 105881962 105882010 -34434755 + L2 LINE L2 3214 3261 -11 633 168 109 0 chr10 105883210 105883329 -34433436 + FLAM_C SINE Alu 1 132 -1 2509 71 0 0 chr10 105883372 105883668 -34433097 + AluY SINE Alu 1 296 -15 33 0 0 0 chr10 105883684 105883717 -34433048 + AT_rich Low_complexity Low_complexity 1 33 0 2431 75 0 3 chr10 105886182 105886477 -34430288 - AluY SINE Alu -17 294 1 355 363 6 6 chr10 105886477 105886648 -34430117 + L1ME LINE L1 5540 5710 -411 369 290 116 49 chr10 105886667 105886891 -34429874 + MIR SINE MIR 24 262 0 2357 95 10 0 chr10 105890470 105890775 -34425990 + AluSx SINE Alu 1 308 -4 427 182 50 0 chr10 105892435 105892556 -34424209 + L1ME4a LINE L1 5994 6120 -1 861 207 114 72 chr10 105893062 105893449 -34423316 + L1ME2 LINE L1 4859 5261 -885 2091 205 72 54 chr10 105893502 105894062 -34422703 + L1ME2 LINE L1 5521 6094 -70 929 235 0 0 chr10 105894062 105894228 -34422537 + FRAM SINE Alu 1 166 0 2091 205 72 54 chr10 105894228 105894281 -34422484 + L1ME2 LINE L1 6094 6145 -19 393 239 120 0 chr10 105894347 105894516 -34422249 + L1MC4 LINE L1 7829 8038 -4 2443 78 0 10 chr10 105894841 105895149 -34421616 - AluY SINE Alu -5 306 2 387 89 0 0 chr10 105895524 105895580 -34421185 - AluJ/FLAM SINE Alu -202 100 45 288 96 0 19 chr10 105895577 105895629 -34421136 - AluJ/FLAM SINE Alu -207 95 45 * 260 152 0 22 chr10 105895702 105895748 -34421017 - MIR SINE MIR -5 257 213 282 234 99 9 chr10 105896035 105896146 -34420619 + L1ME4a LINE L1 5963 6083 -38 2518 116 14 6 chr10 105896161 105896516 -34420249 - L1PB3 LINE L1 0 6154 5797 398 284 146 17 chr10 105897156 105897395 -34419370 + L1ME LINE L1 5553 5822 -299 2296 102 0 0 chr10 105897528 105897850 -34418915 + AluSq SINE Alu 1 322 0 2448 46 0 0 chr10 105897858 105898182 -34418583 + AluY SINE Alu 1 324 0 323 331 50 22 chr10 105898289 105898428 -34418337 + MIR3 SINE MIR 4 146 -62 26 0 0 0 chr10 105900371 105900397 -34416368 + AT_rich Low_complexity Low_complexity 1 26 0 1862 126 31 44 chr10 105900397 105900554 -34416211 - AluSx SINE Alu -23 289 136 2293 85 0 10 chr10 105900554 105900848 -34415917 - AluY SINE Alu -20 291 1 1862 126 31 44 chr10 105900848 105900983 -34415782 - AluSx SINE Alu -176 136 1 603 287 12 0 chr10 105902658 105902822 -34413943 + MER103 DNA DNA 1 166 0 248 262 16 0 chr10 105904518 105904579 -34412186 + MIR3 SINE MIR 144 205 -3 286 271 188 38 chr10 105907375 105907508 -34409257 - MIR SINE MIR -13 249 97 247 164 33 0 chr10 105908689 105908750 -34408015 + (TA)n Simple_repeat Simple_repeat 1 63 0 2117 105 34 0 chr10 105908896 105909191 -34407574 + AluSp SINE Alu 1 305 -8 255 303 130 6 chr10 105909380 105909542 -34407223 + L1P2 LINE L1 5254 5435 -719 229 191 0 0 chr10 105909723 105909765 -34407000 + L1MB7 LINE L1 6142 6183 -1 23 48 0 48 chr10 105910727 105910790 -34405975 + GC_rich Low_complexity Low_complexity 1 60 0 207 0 0 0 chr10 105911023 105911046 -34405719 + (TCC)n Simple_repeat Simple_repeat 1 23 0 274 263 11 84 chr10 105911293 105911483 -34405282 + C-rich Low_complexity Low_complexity 5 180 0 26 82 0 0 chr10 105911530 105911591 -34405174 + GC_rich Low_complexity Low_complexity 1 61 0 1321 154 150 19 chr10 105912242 105912509 -34404256 + MER33 DNA MER1_type 1 302 -22 240 248 129 30 chr10 105912861 105912962 -34403803 + MIR SINE MIR 107 217 -45 2471 48 0 3 chr10 105913539 105913830 -34402935 - AluY SINE Alu -21 290 1 2686 40 0 0 chr10 105913830 105914133 -34402632 - AluY SINE Alu -8 303 1 1842 87 83 11 chr10 105914202 105914478 -34402287 + AluSq SINE Alu 1 296 -17 2124 123 0 0 chr10 105915009 105915302 -34401463 - AluSx SINE Alu -19 293 1 29 28 0 0 chr10 105915406 105915442 -34401323 + AT_rich Low_complexity Low_complexity 1 36 0 2025 136 20 0 chr10 105915465 105915766 -34400999 + AluSx SINE Alu 1 307 -5 1089 146 94 5 chr10 105915829 105916021 -34400744 - AluJb SINE Alu -17 295 87 207 220 0 40 chr10 105916404 105916454 -34400311 - MIR SINE MIR -11 251 204 1694 146 3 82 chr10 105916456 105916784 -34399981 + AluJb SINE Alu 1 302 -10 547 226 38 0 chr10 105916800 105916933 -34399832 + HAL1b LINE L1 937 1074 -274 308 229 152 19 chr10 105917002 105917107 -34399658 + HAL1b LINE L1 1179 1297 -51 1811 161 7 17 chr10 105917267 105917558 -34399207 + AluJo SINE Alu 1 288 -24 2411 95 0 0 chr10 105917886 105918192 -34398573 + AluSc SINE Alu 1 306 -3 467 255 13 13 chr10 105918209 105918358 -34398407 + L1ME4a LINE L1 5964 6112 -9 1159 129 166 13 chr10 105918437 105918889 -34397876 + L1MC3 LINE L1 7137 7782 -3 1709 154 4 0 chr10 105918904 105919164 -34397601 + AluSq SINE Alu 5 265 -48 23 0 0 0 chr10 105919254 105919277 -34397488 + AT_rich Low_complexity Low_complexity 1 23 0 2228 98 27 3 chr10 105919614 105919911 -34396854 + AluSx SINE Alu 1 304 -8 266 263 26 0 chr10 105920558 105920634 -34396131 + (CA)n Simple_repeat Simple_repeat 2 79 0 2005 128 0 14 chr10 105921409 105921545 -34395220 + AluSx SINE Alu 1 137 -171 2296 102 0 3 chr10 105921545 105921848 -34394917 + AluSg SINE Alu 1 302 -8 2005 128 0 14 chr10 105921848 105922023 -34394742 + AluSx SINE Alu 137 308 0 1858 147 0 39 chr10 105922419 105922545 -34394220 + AluJb SINE Alu 11 140 -172 2358 79 7 0 chr10 105922545 105922836 -34393929 + AluSc SINE Alu 1 293 -16 1858 147 0 39 chr10 105922836 105923015 -34393750 + AluJb SINE Alu 140 304 -8 24 53 0 0 chr10 105923093 105923131 -34393634 + AT_rich Low_complexity Low_complexity 1 38 0 584 227 97 16 chr10 105923245 105923430 -34393335 + L1MC4a LINE L1 5741 5940 -1868 200 170 19 0 chr10 105924072 105924125 -34392640 + (CA)n Simple_repeat Simple_repeat 2 55 0 33 0 0 0 chr10 105924431 105924464 -34392301 + AT_rich Low_complexity Low_complexity 1 33 0 465 66 0 0 chr10 105925723 105925784 -34390981 + (TA)n Simple_repeat Simple_repeat 2 62 0 207 100 0 0 chr10 105926277 105926307 -34390458 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 261 163 0 0 chr10 105926958 105927007 -34389758 + T-rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr10 105927622 105927663 -34389102 + AT_rich Low_complexity Low_complexity 1 41 0 460 243 76 0 chr10 105927697 105927841 -34388924 + L1MC/D LINE L1 5667 5821 -1987 2382 103 0 0 chr10 105927866 105928176 -34388589 + AluSx SINE Alu 1 310 -2 2152 125 3 6 chr10 105928227 105928538 -34388227 + AluJb SINE Alu 1 310 -2 1949 135 17 7 chr10 105928768 105929064 -34387701 - AluJb SINE Alu -13 299 1 6026 117 20 44 chr10 105929167 105929869 -34386896 - L1MA8 LINE L1 -3 6288 5618 2203 96 24 3 chr10 105929869 105930161 -34386604 - AluSp SINE Alu -15 298 1 6026 117 20 44 chr10 105930161 105930509 -34386256 - L1MA8 LINE L1 -673 5618 5263 863 198 60 12 chr10 105930532 105930699 -34386066 - AluJo SINE Alu -19 293 119 2170 159 57 81 chr10 105930699 105931096 -34385669 - L1 LINE L1 -885 5261 4856 814 138 26 0 chr10 105931096 105931212 -34385553 + FLAM_C SINE Alu 3 121 -22 201 74 0 0 chr10 105931212 105931239 -34385526 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2170 159 57 81 chr10 105931239 105931313 -34385452 - L1 LINE L1 -1289 4857 4783 1539 185 41 0 chr10 105931313 105931497 -34385268 - AluJo SINE Alu 0 316 115 647 57 11 0 chr10 105931497 105931585 -34385180 + (TTTTA)n Simple_repeat Simple_repeat 2 90 0 1539 185 41 0 chr10 105931585 105931705 -34385060 - AluJo SINE Alu -201 115 1 2170 159 57 81 chr10 105931705 105931908 -34384857 - L1 LINE L1 -1363 4783 4577 2182 103 3 3 chr10 105931908 105932199 -34384566 - AluSg SINE Alu -19 291 1 2170 159 57 81 chr10 105932199 105932280 -34384485 - L1 LINE L1 -1569 4577 4495 2156 101 28 0 chr10 105932280 105932566 -34384199 - AluSx SINE Alu -18 294 1 2170 159 57 81 chr10 105932566 105932612 -34384153 - L1 LINE L1 -1651 4495 4449 1711 150 66 0 chr10 105932650 105932923 -34383842 + AluJb SINE Alu 6 296 -16 4263 157 6 7 chr10 105932929 105933615 -34383150 - L1MB4 LINE L1 0 6180 5496 1590 135 112 4 chr10 105933619 105933879 -34382886 - AluJb SINE Alu -13 299 12 1918 148 3 3 chr10 105933894 105934192 -34382573 - AluJb SINE Alu -10 302 5 2077 116 0 3 chr10 105934256 105934574 -34382191 + AluSx SINE Alu 1 317 0 655 232 97 54 chr10 105934602 105934634 -34382131 - L1ME4a LINE L1 -262 5859 5830 2302 94 3 0 chr10 105934634 105934931 -34381834 + AluSp SINE Alu 1 298 -15 655 232 97 54 chr10 105934931 105935157 -34381608 - L1ME4a LINE L1 -291 5830 5590 1978 106 0 78 chr10 105935664 105935984 -34380781 - AluSx SINE Alu -17 295 1 569 299 42 32 chr10 105936259 105936476 -34380289 + MIR SINE MIR 28 246 -16 185 275 148 42 chr10 105936480 105936622 -34380143 + L2 LINE L2 2907 3063 -209 2120 96 7 3 chr10 105936743 105937034 -34379731 - AluSg SINE Alu -18 292 1 2068 125 7 0 chr10 105937129 105937416 -34379349 - AluSx SINE Alu -17 295 7 324 313 10 20 chr10 105937665 105937764 -34379001 - MIR SINE MIR -87 121 24 743 158 8 24 chr10 105938577 105938704 -34378061 + FLAM_C SINE Alu 2 126 -7 1858 161 10 10 chr10 105938739 105939044 -34377721 - AluJo SINE Alu -7 305 1 213 296 70 0 chr10 105939206 105939277 -34377488 - L2 LINE L2 -4 3268 3193 837 120 0 30 chr10 105939443 105939576 -34377189 + FLAM_C SINE Alu 15 143 0 1679 176 25 3 chr10 105939701 105939985 -34376780 - AluJb SINE Alu -21 291 2 607 183 25 69 chr10 105940351 105940553 -34376212 + L1M4 LINE L1 4330 4522 -1624 262 209 0 58 chr10 105940526 105940612 -34376153 + L1M4 LINE L1 4274 4354 -1792 * 1734 157 16 38 chr10 105940623 105940942 -34375823 - AluJo SINE Alu 0 312 1 233 172 190 35 chr10 105942845 105942903 -34373862 + MIR SINE MIR 38 104 -104 300 227 169 92 chr10 105942925 105942972 -34373793 - MER112 DNA MER1_type -37 223 181 2133 98 7 0 chr10 105942972 105943259 -34373506 - AluSx SINE Alu -23 289 1 300 227 169 92 chr10 105943259 105943418 -34373347 - MER112 DNA MER1_type -79 181 1 2178 147 34 3 chr10 105943426 105943753 -34373012 - MER1B DNA MER1_type 0 337 1 306 326 132 25 chr10 105943844 105944200 -34372565 - L2 LINE L2 -13 3300 2907 2272 86 7 13 chr10 105944344 105944646 -34372119 + AluSx SINE Alu 11 310 -2 331 271 276 10 chr10 105944671 105944870 -34371895 - L2 LINE L2 -34 3279 3028 328 95 0 0 chr10 105945114 105945156 -34371609 + AluSp SINE Alu 3 44 -256 1927 114 4 0 chr10 105945188 105945459 -34371306 + AluSp SINE Alu 42 313 0 370 207 96 74 chr10 105945545 105945680 -34371085 - LTR16B LTR ERVL 0 464 327 1994 136 0 48 chr10 105945680 105946055 -34370710 - L1MB3 LINE L1 -344 5839 5483 2765 83 5 31 chr10 105946057 105946277 -34370488 - THE1C LTR MaLR 0 375 168 2169 62 45 10 chr10 105946277 105946399 -34370366 + AluY SINE Alu 1 117 -194 180 0 0 0 chr10 105946399 105946419 -34370346 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2169 62 45 10 chr10 105946419 105946586 -34370179 + AluY SINE Alu 117 300 -11 2765 83 5 31 chr10 105946586 105946750 -34370015 - THE1C LTR MaLR -207 168 1 204 40 0 0 chr10 105946755 105946780 -34369985 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1184 184 107 0 chr10 105946798 105947032 -34369733 - AluJo SINE Alu -53 259 1 600 72 0 166 chr10 105947032 105947108 -34369657 - L1M LINE L1 -782 5398 5311 2146 114 3 0 chr10 105947108 105947407 -34369358 - AluSg SINE Alu -10 300 1 2372 84 0 0 chr10 105947416 105947715 -34369050 - AluSg SINE Alu -11 299 1 600 72 0 166 chr10 105947715 105947767 -34368998 - L1M LINE L1 -878 5302 5283 228 88 0 0 chr10 105947768 105947802 -34368963 - Alu SINE Alu -232 71 38 465 123 0 0 chr10 105947804 105947869 -34368896 - AluS SINE Alu -242 71 7 386 217 174 0 chr10 105947878 105947993 -34368772 - MIR SINE MIR -114 148 14 1632 166 16 22 chr10 105948060 105948373 -34368392 + AluJo SINE Alu 1 311 -1 945 279 8 12 chr10 105948621 105948879 -34367886 + MIR SINE MIR 6 262 0 189 0 0 0 chr10 105948948 105948969 -34367796 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 388 254 107 68 chr10 105950050 105950167 -34366598 - MIR SINE MIR 0 262 134 2027 82 72 7 chr10 105950167 105950458 -34366307 - AluY SINE Alu -1 310 1 388 254 107 68 chr10 105950458 105950517 -34366248 - MIR SINE MIR -128 134 79 913 242 6 63 chr10 105950532 105950867 -34365898 + L1ME2 LINE L1 5840 6155 -9 760 192 23 0 chr10 105950892 105951022 -34365743 + FLAM_A SINE Alu 1 133 0 33 43 0 0 chr10 105951078 105951125 -34365640 + AT_rich Low_complexity Low_complexity 1 47 0 2171 100 3 0 chr10 105951133 105951432 -34365333 + AluSp SINE Alu 1 300 -13 1817 130 16 41 chr10 105951648 105951963 -34364802 - AluSx SINE Alu -5 307 1 2417 177 63 2 chr10 105952140 105952632 -34364133 - Charlie1b DNA MER1_type 0 523 2 1904 147 6 31 chr10 105952635 105952955 -34363810 + AluJb SINE Alu 1 312 0 251 215 15 62 chr10 105953095 105953160 -34363605 + L3 LINE CR1 1508 1569 -8 2313 88 0 25 chr10 105953604 105953924 -34362841 - AluSx SINE Alu 0 312 1 263 236 0 0 chr10 105953927 105953982 -34362783 + MIR SINE MIR 100 154 -108 2006 117 3 13 chr10 105953985 105954308 -34362457 - AluSx SINE Alu 0 312 1 1263 192 31 57 chr10 105954336 105954589 -34362176 + AluJo SINE Alu 3 249 -63 2187 69 11 0 chr10 105954589 105954886 -34361879 + AluY SINE Alu 6 305 0 1263 192 31 57 chr10 105954886 105954948 -34361817 + AluJo SINE Alu 249 311 -1 465 213 291 8 chr10 105954965 105955092 -34361673 + FAM SINE Alu 1 163 -12 690 199 114 0 chr10 105955102 105955233 -34361532 - FRAM SINE Alu -30 146 1 230 376 0 18 chr10 105955235 105955344 -34361421 + MIR SINE MIR 152 258 -4 193 309 103 0 chr10 105955450 105955518 -34361247 + MIR SINE MIR 157 231 -31 543 245 171 22 chr10 105955844 105956063 -34360702 + MIR SINE MIR 15 262 0 184 57 29 29 chr10 105956259 105956294 -34360471 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 2204 106 0 0 chr10 105956368 105956670 -34360095 + AluSx SINE Alu 1 302 -10 287 287 46 11 chr10 105957217 105957304 -34359461 - MIR SINE MIR -148 114 25 2334 84 3 0 chr10 105957442 105957753 -34359012 + AluSx SINE Alu 1 312 0 2250 108 36 41 chr10 105958527 105958875 -34357890 + L1MB8 LINE L1 5792 6139 -89 1816 149 0 17 chr10 105958875 105959171 -34357594 - AluJb SINE Alu -21 291 1 2250 108 36 41 chr10 105959171 105959261 -34357504 + L1MB8 LINE L1 6139 6228 0 1373 169 76 10 chr10 105959408 105959656 -34357109 + MER33 DNA MER1_type 1 274 -2311 1002 204 152 34 chr10 105959656 105959925 -34356840 + AluJo SINE Alu 2 302 0 1373 169 76 10 chr10 105959925 105959978 -34356787 + MER33 DNA MER1_type 274 322 -2 1865 190 24 3 chr10 105960021 105960352 -34356413 - MER58B DNA MER1_type 0 341 4 386 294 0 0 chr10 105960468 105960587 -34356178 - MIR3 SINE MIR -4 204 86 1785 153 7 7 chr10 105960756 105961057 -34355708 - AluJb SINE Alu -7 305 5 1996 126 3 22 chr10 105961067 105961384 -34355381 - AluJo SINE Alu -1 311 1 356 338 100 27 chr10 105961384 105961915 -34354850 - L2 LINE L2 -14 3258 2681 201 274 214 51 chr10 105962227 105962344 -34354421 + MIR SINE MIR 117 252 -10 2280 87 3 0 chr10 105962478 105962777 -34353988 - AluSp SINE Alu -13 300 1 834 135 8 8 chr10 105962879 105963012 -34353753 + AluJb SINE Alu 154 286 -26 1909 148 24 9 chr10 105963280 105963611 -34353154 - MER7A DNA MER2_type -3 343 10 2133 121 0 0 chr10 105963788 105964077 -34352688 + AluSq SINE Alu 1 289 -24 348 296 128 48 chr10 105964103 105964353 -34352412 - L1MCa LINE L1 -4215 2211 1942 306 167 31 104 chr10 105964392 105964488 -34352277 + L1MCa LINE L1 1995 2083 -4343 274 254 0 0 chr10 105965232 105965291 -34351474 - MIR SINE MIR -117 145 87 361 228 13 0 chr10 105965466 105965545 -34351220 + MIR3 SINE MIR 98 177 -31 2516 51 0 0 chr10 105966710 105967021 -34349744 + AluY SINE Alu 1 311 0 2451 74 0 7 chr10 105967128 105967438 -34349327 - AluSp SINE Alu -5 308 1 1735 160 42 30 chr10 105967884 105968104 -34348661 + L1MB7 LINE L1 5827 6055 -129 1675 158 7 34 chr10 105968104 105968439 -34348326 + AluJb SINE Alu 1 327 0 1735 160 42 30 chr10 105968439 105968554 -34348211 + L1MB7 LINE L1 6055 6167 -17 633 206 0 0 chr10 105968629 105968736 -34348029 - AluJ SINE Alu -21 291 185 246 32 0 0 chr10 105969091 105969122 -34347643 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 182 310 62 47 chr10 105969123 105969252 -34347513 - L2 LINE L2 -1 3312 3182 242 226 48 16 chr10 105969671 105969733 -34347032 - MIR SINE MIR -98 110 47 230 154 0 0 chr10 105970196 105970235 -34346530 - AluJo SINE Alu -8 294 256 1299 159 5 0 chr10 105970235 105970442 -34346323 - AluJo SINE Alu -104 208 1 405 227 15 158 chr10 105970460 105970663 -34346102 + MIR SINE MIR 77 250 -12 198 354 41 78 chr10 105970986 105971097 -34345668 - L2 LINE L2 -351 2963 2849 557 222 48 0 chr10 105971097 105971223 -34345542 + FLAM_C SINE Alu 2 133 0 198 354 41 78 chr10 105971223 105971236 -34345529 - L2 LINE L2 -465 2849 2837 2126 102 0 20 chr10 105971236 105971541 -34345224 + AluSg SINE Alu 2 300 -10 198 354 41 78 chr10 105971541 105971734 -34345031 - L2 LINE L2 -477 2837 2657 378 0 0 0 chr10 105972070 105972112 -34344653 + (TA)n Simple_repeat Simple_repeat 2 43 0 2149 87 7 30 chr10 105972112 105972411 -34344354 - AluY SINE Alu -17 294 3 323 229 0 0 chr10 105972414 105972475 -34344290 - L1M4 LINE L1 -3834 2312 2252 2026 118 0 11 chr10 105972479 105972793 -34343972 - AluSx SINE Alu 0 311 1 187 191 128 0 chr10 105972805 105972852 -34343913 + MIR SINE MIR 72 124 -138 367 303 37 17 chr10 105972971 105973164 -34343601 + MIR SINE MIR 12 207 -55 1587 176 29 13 chr10 105973167 105973474 -34343291 + AluJo SINE Alu 1 312 0 1955 144 20 0 chr10 105973477 105973783 -34342982 + AluJb SINE Alu 1 312 0 2269 76 0 0 chr10 105973792 105974081 -34342684 + AluSx SINE Alu 1 289 -23 187 333 0 0 chr10 105974387 105974435 -34342330 + L2 LINE L2 3173 3220 -93 508 246 62 67 chr10 105975362 105975557 -34341208 - MIR SINE MIR 0 262 69 312 313 221 13 chr10 105975657 105975865 -34340900 + MIR SINE MIR 4 250 -12 262 295 29 38 chr10 105976781 105976886 -34339879 - MIR3 SINE MIR -26 182 79 265 308 66 0 chr10 105977338 105977429 -34339336 + L2 LINE L2 3173 3269 -3 418 305 90 6 chr10 105978062 105978229 -34338536 - MIR SINE MIR -66 196 16 871 282 150 39 chr10 105980405 105980591 -34336174 - L2 LINE L2 -13 3300 3136 1411 142 111 45 chr10 105980591 105980880 -34335885 + AluSx SINE Alu 1 308 -4 1832 141 0 14 chr10 105980882 105981166 -34335599 + AluSx SINE Alu 1 280 -32 871 282 150 39 chr10 105981166 105981685 -34335080 - L2 LINE L2 -177 3136 2501 2440 231 68 11 chr10 105981840 105982544 -34334221 + L2 LINE L2 2006 2749 -565 1047 156 0 0 chr10 105982544 105982711 -34334054 + AluSg/x SINE Alu 129 295 -15 584 263 41 114 chr10 105982713 105983332 -34333433 + L2 LINE L2 2742 3313 0 207 0 0 0 chr10 105986564 105986587 -34330178 + (A)n Simple_repeat Simple_repeat 1 23 0 224 341 68 30 chr10 105988079 105988211 -34328554 + MIR3 SINE MIR 27 163 -45 233 159 79 48 chr10 105989199 105989262 -34327503 - LTR42 LTR ERVL -347 148 84 275 223 91 8 chr10 105991934 105992059 -34324706 + MIR SINE MIR 44 185 -23 21 0 0 0 chr10 105992122 105992143 -34324622 + GC_rich Low_complexity Low_complexity 1 21 0 214 176 15 44 chr10 105992216 105992284 -34324481 + (CGGGG)n Simple_repeat Simple_repeat 3 68 0 325 234 27 54 chr10 105992540 105992724 -34324041 + G-rich Low_complexity Low_complexity 1 179 0 351 0 0 0 chr10 105993277 105993316 -34323449 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr10 105994182 105994205 -34322560 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 242 229 14 0 chr10 105995407 105995477 -34321288 + (CA)n Simple_repeat Simple_repeat 1 71 0 189 0 0 0 chr10 105996957 105996978 -34319787 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 207 0 0 0 chr10 105998856 105998879 -34317886 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1653 83 153 0 chr10 106003217 106003459 -34313306 - AluSc SINE Alu -30 279 1 887 127 0 63 chr10 106003462 106003604 -34313161 - AluJo/FLAM SINE Alu -169 133 1 253 194 8 0 chr10 106004103 106004160 -34312605 - Alu SINE Alu -6 296 249 210 71 0 0 chr10 106004182 106004210 -34312555 + (TC)n Simple_repeat Simple_repeat 2 29 0 585 222 0 0 chr10 106004214 106004313 -34312452 - AluJ/FLAM SINE Alu -212 100 2 1841 61 13 17 chr10 106004343 106004573 -34312192 + AluY SINE Alu 73 301 -10 1822 149 49 3 chr10 106004578 106004866 -34311899 + AluSx SINE Alu 1 301 -11 2244 103 0 13 chr10 106004873 106005174 -34311591 + AluSg SINE Alu 1 297 -13 642 167 245 19 chr10 106005180 106005396 -34311369 + L1MD3 LINE L1 7730 7994 -1 2348 111 3 0 chr10 106005639 106005946 -34310819 + AluSp SINE Alu 1 308 -5 1715 172 14 17 chr10 106006114 106006410 -34310355 + AluJb SINE Alu 1 295 -17 2348 99 3 13 chr10 106006685 106006999 -34309766 - AluSq SINE Alu -2 311 1 33 0 0 0 chr10 106007247 106007280 -34309485 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 106007676 106007699 -34309066 + AT_rich Low_complexity Low_complexity 1 23 0 1344 154 31 101 chr10 106008096 106008414 -34308351 - AluJb SINE Alu -16 296 1 2280 80 40 10 chr10 106008428 106008730 -34308035 - AluY SINE Alu 0 311 1 1083 92 0 0 chr10 106008732 106008863 -34307902 - AluSq/x SINE Alu -182 131 1 243 0 0 0 chr10 106009612 106009639 -34307126 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr10 106010555 106010579 -34306186 + AT_rich Low_complexity Low_complexity 1 24 0 1033 70 101 0 chr10 106012138 106012296 -34304469 + MER30 DNA MER1_type 2 175 -55 2133 122 0 0 chr10 106012703 106012982 -34303783 - AluSg SINE Alu -31 279 1 2127 112 0 59 chr10 106012986 106013309 -34303456 - AluSx SINE Alu -5 307 4 27 0 0 0 chr10 106013451 106013478 -34303287 + AT_rich Low_complexity Low_complexity 1 27 0 2357 88 7 10 chr10 106014831 106015136 -34301629 - AluSq SINE Alu -9 304 1 2305 100 0 0 chr10 106016302 106016593 -34300172 - AluSx SINE Alu -19 293 3 2146 136 7 0 chr10 106017191 106017493 -34299272 - AluSg SINE Alu -6 304 1 2337 113 0 3 chr10 106017531 106017840 -34298925 + AluSq SINE Alu 1 308 -5 2217 112 0 0 chr10 106018287 106018582 -34298183 + AluSg SINE Alu 1 295 -15 2380 78 17 0 chr10 106018814 106019110 -34297655 + AluSp SINE Alu 1 301 -12 2048 97 33 40 chr10 106019279 106019578 -34297187 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr10 106019767 106019788 -34296977 + AT_rich Low_complexity Low_complexity 1 21 0 227 208 42 0 chr10 106019893 106019941 -34296824 - MIR SINE MIR -133 129 80 21 0 0 0 chr10 106020037 106020058 -34296707 + AT_rich Low_complexity Low_complexity 1 21 0 757 164 9 0 chr10 106020485 106020601 -34296164 + FLAM_C SINE Alu 1 117 -16 33 0 0 0 chr10 106020601 106020634 -34296131 + AT_rich Low_complexity Low_complexity 1 33 0 2489 70 0 3 chr10 106020695 106020995 -34295770 - AluY SINE Alu -12 299 1 1697 178 7 24 chr10 106021021 106021319 -34295446 - AluJo SINE Alu -19 293 1 1411 153 28 0 chr10 106021469 106021684 -34295081 - AluJb SINE Alu -22 290 70 2347 110 0 0 chr10 106021795 106022096 -34294669 + AluSp SINE Alu 1 301 -12 2540 55 0 0 chr10 106022096 106022387 -34294378 + AluY SINE Alu 1 291 -20 1952 109 4 14 chr10 106022615 106022891 -34293874 - AluSq SINE Alu -3 310 38 1070 121 0 0 chr10 106023214 106023355 -34293410 + AluJb SINE Alu 1 141 -171 30 59 0 0 chr10 106023372 106023423 -34293342 + AT_rich Low_complexity Low_complexity 1 51 0 1209 134 80 31 chr10 106024525 106024749 -34292016 - MER46A DNA MER2_type 0 236 2 2301 107 0 7 chr10 106025110 106025409 -34291356 + AluSg SINE Alu 1 297 -13 208 236 268 108 chr10 106025636 106025793 -34290972 + MER5A DNA MER1_type 7 188 -1 2109 121 34 0 chr10 106025856 106026153 -34290612 + AluSx SINE Alu 1 307 -5 2097 110 43 13 chr10 106026199 106026498 -34290267 + AluSg SINE Alu 3 310 0 448 113 56 14 chr10 106027168 106027239 -34289526 - AluSg/x SINE Alu -19 291 218 1013 136 86 6 chr10 106027239 106027401 -34289364 - AluSq SINE Alu -126 187 13 2265 108 3 13 chr10 106027530 106027845 -34288920 + AluSx SINE Alu 1 312 0 1654 179 39 7 chr10 106027859 106028139 -34288626 + AluJb SINE Alu 17 305 -7 913 148 0 7 chr10 106028683 106028857 -34287908 + AluSg/x SINE Alu 137 309 0 1261 158 33 21 chr10 106028905 106029146 -34287619 - MER96B DNA MER1_type? -171 246 3 2038 137 3 3 chr10 106030468 106030767 -34285998 + AluSx SINE Alu 1 299 -13 856 170 0 7 chr10 106030886 106031021 -34285744 + AluSg/x SINE Alu 158 291 -21 2326 69 0 23 chr10 106031702 106032006 -34284759 - AluSg SINE Alu -13 297 1 261 83 0 0 chr10 106032376 106032412 -34284353 + (A)n Simple_repeat Simple_repeat 1 36 0 1876 125 33 10 chr10 106032412 106032716 -34284049 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr10 106033298 106033322 -34283443 + AT_rich Low_complexity Low_complexity 1 24 0 197 81 0 54 chr10 106034559 106034596 -34282169 + (CCCCCT)n Simple_repeat Simple_repeat 5 39 0 355 253 88 88 chr10 106035440 106035736 -34281029 - L2 LINE L2 -108 3164 2869 2241 99 3 26 chr10 106036061 106036365 -34280400 - AluSx SINE Alu -15 297 1 1533 159 46 33 chr10 106036459 106036761 -34280004 - AluJo SINE Alu -6 306 1 381 38 0 19 chr10 106036761 106036814 -34279951 + LTR56 LTR ERV1 11 62 -383 479 192 10 40 chr10 106036831 106036892 -34279873 + AluJo SINE Alu 74 132 -180 2466 63 36 0 chr10 106036892 106037194 -34279571 + AluSp SINE Alu 1 313 0 479 192 10 40 chr10 106037194 106037231 -34279534 + AluJo SINE Alu 132 169 -143 359 113 0 28 chr10 106037231 106037302 -34279463 + Alu SINE Alu 234 302 0 1792 134 87 34 chr10 106037327 106037367 -34279398 + LTR56 LTR ERV1 45 81 -364 2235 107 17 0 chr10 106037367 106037667 -34279098 + AluSg SINE Alu 1 305 -5 1792 134 87 34 chr10 106037667 106038007 -34278758 + LTR56 LTR ERV1 81 445 0 247 303 15 0 chr10 106038253 106038319 -34278446 + L2 LINE L2 3245 3311 -2 * 253 261 50 50 chr10 106038309 106038428 -34278337 - L2 LINE L2 -77 3236 3118 1220 270 139 38 chr10 106038482 106038769 -34277996 - L2 LINE L2 -698 2616 2360 1866 136 52 14 chr10 106038769 106039055 -34277710 + AluJo SINE Alu 1 297 -15 1220 270 139 38 chr10 106039055 106039348 -34277417 - L2 LINE L2 -954 2360 1977 2054 97 4 0 chr10 106039391 106039650 -34277115 + AluSx SINE Alu 6 265 -47 1608 150 112 4 chr10 106039783 106040050 -34276715 + AluJb SINE Alu 1 296 -16 295 255 39 78 chr10 106040146 106040299 -34276466 - L2 LINE L2 -50 3263 3117 2547 66 0 0 chr10 106040383 106040684 -34276081 - AluY SINE Alu -10 301 1 460 206 93 0 chr10 106040740 106040837 -34275928 + MIR3 SINE MIR 55 160 -48 2169 128 3 0 chr10 106040843 106041133 -34275632 - AluSx SINE Alu -17 295 5 2176 114 7 3 chr10 106041725 106042024 -34274741 + AluSx SINE Alu 7 306 -6 402 242 5 54 chr10 106046005 106046191 -34270574 + (CCCCG)n Simple_repeat Simple_repeat 3 179 0 282 56 0 0 chr10 106047103 106047139 -34269626 + (CA)n Simple_repeat Simple_repeat 1 36 0 258 307 27 27 chr10 106047161 106047455 -34269310 + (CACG)n Simple_repeat Simple_repeat 1 294 0 426 20 0 0 chr10 106048718 106048769 -34267996 + (TG)n Simple_repeat Simple_repeat 2 52 0 634 270 149 9 chr10 106052182 106052404 -34264361 - MIR SINE MIR -8 254 2 1551 135 161 0 chr10 106052697 106052957 -34263808 - AluSx SINE Alu 0 302 1 1150 174 101 23 chr10 106053040 106053102 -34263663 + AluJo SINE Alu 72 128 -184 2439 87 0 0 chr10 106053102 106053401 -34263364 + AluSg SINE Alu 1 299 -11 1150 174 101 23 chr10 106053401 106053557 -34263208 + AluJo SINE Alu 128 307 -5 378 239 23 0 chr10 106053577 106053665 -34263100 - MIR SINE MIR -44 218 129 200 200 0 0 chr10 106053683 106053718 -34263047 - MIR SINE MIR -111 151 117 2132 116 11 0 chr10 106053810 106054114 -34262651 + AluSg SINE Alu 1 307 0 21 57 0 0 chr10 106056338 106056373 -34260392 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 106057263 106057284 -34259481 + GC_rich Low_complexity Low_complexity 1 21 0 223 238 196 0 chr10 106058041 106058140 -34258625 - MIR SINE MIR -67 141 59 180 0 0 0 chr10 106059607 106059627 -34257138 + (CA)n Simple_repeat Simple_repeat 1 20 0 28 71 0 0 chr10 106059990 106060046 -34256719 + GC_rich Low_complexity Low_complexity 1 56 0 2220 97 3 10 chr10 106063101 106063399 -34253366 + AluSc SINE Alu 1 296 -13 265 371 53 41 chr10 106064490 106064660 -34252105 - MIR3 SINE MIR -18 190 19 2315 110 0 3 chr10 106066512 106066820 -34249945 - AluSx SINE Alu -5 307 1 2280 114 0 0 chr10 106066844 106067142 -34249623 - AluSx SINE Alu -10 302 5 2107 120 23 16 chr10 106068895 106069203 -34247562 + AluSx SINE Alu 1 310 -2 2198 110 7 23 chr10 106069302 106069612 -34247153 - AluSq SINE Alu -8 305 1 2415 94 0 0 chr10 106070254 106070552 -34246213 + AluSg SINE Alu 1 298 -12 253 351 26 0 chr10 106070609 106070686 -34246079 + MIR3 SINE MIR 78 156 -52 486 299 87 17 chr10 106071090 106071331 -34245434 + MIR SINE MIR 3 260 -2 2541 78 3 0 chr10 106071480 106071788 -34244977 - AluSq SINE Alu -4 309 1 790 178 0 0 chr10 106071849 106071967 -34244798 + AluJo/FLAM SINE Alu 1 118 -184 837 219 0 0 chr10 106071969 106072115 -34244650 - AluJb SINE Alu -14 298 153 321 90 67 0 chr10 106072120 106072209 -34244556 + (TA)n Simple_repeat Simple_repeat 1 95 0 433 276 123 47 chr10 106072215 106072385 -34244380 - MIR3 SINE MIR -15 193 11 1837 129 61 14 chr10 106073597 106073875 -34242890 + AluSx SINE Alu 1 291 -21 707 278 124 8 chr10 106074672 106074906 -34241859 + MIR SINE MIR 2 262 0 183 114 0 0 chr10 106076659 106076694 -34240071 + (TA)n Simple_repeat Simple_repeat 2 36 0 276 221 29 0 chr10 106076826 106076894 -34239871 + L1ME1 LINE L1 120 189 -6207 933 307 96 32 chr10 106076945 106077571 -34239194 + L1ME1 LINE L1 347 1012 -5384 823 267 67 42 chr10 106077562 106077872 -34238893 + L1ME1 LINE L1 1404 1705 -4691 * 2239 123 3 0 chr10 106077872 106078172 -34238593 + AluSg SINE Alu 1 301 -9 2431 62 3 56 chr10 106078172 106078495 -34238270 + AluY SINE Alu 1 306 -5 823 267 67 42 chr10 106078495 106078587 -34238178 + L1ME1 LINE L1 1704 1817 -4579 1132 241 100 54 chr10 106078605 106078716 -34238049 + L1ME1 LINE L1 1918 2022 -4193 2130 132 0 0 chr10 106078716 106079011 -34237754 + AluSx SINE Alu 1 295 -17 1132 241 100 54 chr10 106079011 106079343 -34237422 + L1ME1 LINE L1 2022 2360 -3855 2235 60 4 0 chr10 106079343 106079610 -34237155 + AluSp SINE Alu 1 268 -45 1132 241 100 54 chr10 106079610 106079912 -34236853 + L1ME1 LINE L1 2360 2647 -3568 14018 123 39 84 chr10 106079914 106080063 -34236702 + Tigger2 DNA MER2_type 2 156 -2562 909 142 0 8 chr10 106080063 106080197 -34236568 + FLAM_C SINE Alu 1 133 0 2124 142 0 0 chr10 106080202 106080500 -34236265 + AluSg SINE Alu 1 299 -7 261 0 0 0 chr10 106080500 106080529 -34236236 + (CA)n Simple_repeat Simple_repeat 2 30 0 6312 46 35 0 chr10 106080534 106081316 -34235449 + L1PA5 LINE L1 5340 6148 -6 14018 123 39 84 chr10 106081316 106081392 -34235373 + Tigger2 DNA MER2_type 160 238 -2480 2219 84 0 0 chr10 106081392 106081667 -34235098 + AluY SINE Alu 37 311 0 14018 123 39 84 chr10 106081667 106081912 -34234853 + Tigger2 DNA MER2_type 238 493 -2225 2229 124 0 0 chr10 106081912 106082210 -34234555 - AluSx SINE Alu -14 298 1 14018 123 39 84 chr10 106082210 106082360 -34234405 + Tigger2 DNA MER2_type 493 648 -2070 2469 93 0 0 chr10 106082360 106082662 -34234103 + AluSq SINE Alu 1 302 -11 14018 123 39 84 chr10 106082662 106083321 -34233444 + Tigger2 DNA MER2_type 648 1335 -1383 242 0 61 0 chr10 106083321 106083354 -34233411 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 14018 123 39 84 chr10 106083354 106083972 -34232793 + Tigger2 DNA MER2_type 1335 1979 -739 1902 172 3 0 chr10 106083972 106084269 -34232496 + AluJo SINE Alu 1 298 -14 796 163 0 15 chr10 106084278 106084413 -34232352 + FLAM_C SINE Alu 1 133 0 14018 123 39 84 chr10 106084413 106085211 -34231554 + Tigger2 DNA MER2_type 1987 2589 -129 2372 111 0 0 chr10 106085211 106085509 -34231256 + AluSx SINE Alu 1 298 -14 14018 123 39 84 chr10 106085509 106085630 -34231135 + Tigger2 DNA MER2_type 2589 2714 -4 2373 241 87 3 chr10 106085635 106086173 -34230592 + L1ME1 LINE L1 2650 3288 -2927 1986 167 3 0 chr10 106086173 106086484 -34230281 + AluJb SINE Alu 1 312 0 2373 241 87 3 chr10 106086484 106086807 -34229958 + L1ME1 LINE L1 3288 3583 -2632 248 252 61 35 chr10 106086891 106087006 -34229759 + L1MC4 LINE L1 7924 8041 -1 * 780 221 14 9 chr10 106086999 106087212 -34229553 + L1ME1 LINE L1 3549 3762 -2453 980 141 0 37 chr10 106087233 106087396 -34229369 + AluJb SINE Alu 156 312 0 2152 214 76 84 chr10 106087405 106088140 -34228625 + L1ME1 LINE L1 4339 5079 -1154 2255 111 17 0 chr10 106088140 106088438 -34228327 + AluSx SINE Alu 1 303 -9 2152 214 76 84 chr10 106088438 106088836 -34227929 + L1ME1 LINE L1 5079 5479 -754 1545 117 0 5 chr10 106088836 106089042 -34227723 + AluSx SINE Alu 1 205 -107 2152 214 76 84 chr10 106089042 106089097 -34227668 + L1ME1 LINE L1 5479 5533 -700 2232 127 0 0 chr10 106089097 106089397 -34227368 + AluSx SINE Alu 1 300 -12 2152 214 76 84 chr10 106089397 106089543 -34227222 + L1ME1 LINE L1 5533 5654 -579 2186 90 0 35 chr10 106089543 106089831 -34226934 + AluSg SINE Alu 1 278 -32 195 69 0 0 chr10 106089834 106089863 -34226902 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2950 162 19 9 chr10 106089894 106090431 -34226334 - L1MB7 LINE L1 -10 6174 5633 750 240 32 28 chr10 106090452 106090705 -34226060 + L1ME1 LINE L1 5944 6212 -31 2397 92 0 7 chr10 106092388 106092693 -34224072 + AluSc SINE Alu 1 303 -6 1141 163 0 6 chr10 106093347 106093525 -34223240 + AluJo SINE Alu 1 177 -135 968 148 0 7 chr10 106093533 106093675 -34223090 + AluJo SINE Alu 93 233 -79 718 186 0 0 chr10 106093675 106093793 -34222972 + AluJo SINE Alu 174 291 -21 2326 100 14 0 chr10 106093801 106094092 -34222673 + AluSg SINE Alu 1 295 -15 2113 140 3 3 chr10 106094397 106094705 -34222060 + AluSx SINE Alu 1 308 -4 1779 177 3 17 chr10 106094786 106095086 -34221679 + AluJo SINE Alu 13 308 -4 1096 181 16 0 chr10 106095088 106095270 -34221495 + AluJo SINE Alu 120 304 -8 448 246 112 15 chr10 106095626 106095760 -34221005 + MIR SINE MIR 20 166 -96 2218 105 20 7 chr10 106095777 106096073 -34220692 - AluSq SINE Alu -13 300 1 323 227 106 116 chr10 106096910 106097117 -34219648 - MER63A DNA MER1_type -2 208 4 526 215 56 42 chr10 106097794 106098002 -34218763 + L1MB2 LINE L1 5947 6171 0 209 291 0 0 chr10 106098029 106098084 -34218681 + L2 LINE L2 3213 3267 -5 2241 93 4 0 chr10 106098938 106099218 -34217547 - AluSg SINE Alu -29 281 1 1726 173 7 10 chr10 106099554 106099855 -34216910 + AluJo SINE Alu 1 300 -12 1587 192 0 17 chr10 106100145 106100408 -34216357 + AluJo SINE Alu 15 274 -38 243 0 0 0 chr10 106100408 106100435 -34216330 + (CA)n Simple_repeat Simple_repeat 1 27 0 1587 192 0 17 chr10 106100435 106100458 -34216307 + AluJo SINE Alu 274 296 -16 5125 143 45 24 chr10 106101014 106101192 -34215573 + L1MB4 LINE L1 4959 5132 -1048 193 29 59 0 chr10 106101192 106101226 -34215539 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5125 143 45 24 chr10 106101226 106102193 -34214572 + L1MB4 LINE L1 5132 6130 -50 2151 92 7 10 chr10 106102193 106102488 -34214277 + AluSq SINE Alu 1 294 -19 5125 143 45 24 chr10 106102488 106102541 -34214224 + L1MB4 LINE L1 6130 6180 0 1982 139 20 7 chr10 106102651 106102952 -34213813 + AluSx SINE Alu 1 305 -7 1521 125 29 118 chr10 106103839 106104152 -34212613 - AluJb SINE Alu -26 286 2 28 0 0 0 chr10 106104480 106104508 -34212257 + AT_rich Low_complexity Low_complexity 1 28 0 212 364 68 34 chr10 106106380 106106556 -34210209 + L2 LINE L2 2429 2610 -704 296 146 146 56 chr10 106106594 106106641 -34210124 + L1MD3 LINE L1 7020 7061 -934 189 94 0 0 chr10 106106649 106106681 -34210084 + (TA)n Simple_repeat Simple_repeat 2 33 0 1540 168 24 24 chr10 106106681 106106963 -34209802 - AluJb SINE Alu -27 285 1 296 146 146 56 chr10 106106963 106107004 -34209761 + L1MD3 LINE L1 7061 7116 -879 318 302 23 0 chr10 106107004 106107090 -34209675 + MLT1A2 LTR MaLR 35 122 -445 2126 178 142 38 chr10 106107093 106107294 -34209471 + L1MD3 LINE L1 7404 7583 -412 2066 147 3 0 chr10 106107294 106107594 -34209171 - AluJo SINE Alu -10 302 2 2126 178 142 38 chr10 106107594 106107606 -34209159 + L1MD3 LINE L1 7583 7592 -403 2211 125 3 6 chr10 106107606 106107918 -34208847 - AluSq SINE Alu -2 311 1 2126 178 142 38 chr10 106107918 106108237 -34208528 + L1MD3 LINE L1 7592 7993 -2 1969 144 0 11 chr10 106108248 106108533 -34208232 + AluJb SINE Alu 1 282 -30 221 160 0 20 chr10 106108577 106108584 -34208181 + (TG)n Simple_repeat Simple_repeat 1 7 -42 1731 163 0 45 chr10 106108584 106108897 -34207868 + AluJb SINE Alu 1 299 -13 221 160 0 20 chr10 106108897 106108939 -34207826 + (TG)n Simple_repeat Simple_repeat 7 49 0 205 258 0 91 chr10 106109054 106109120 -34207645 + L2 LINE L2 3207 3266 -6 265 308 0 0 chr10 106109211 106109276 -34207489 + L2 LINE L2 3207 3271 -1 26 0 0 0 chr10 106109858 106109884 -34206881 + AT_rich Low_complexity Low_complexity 1 26 0 220 226 12 24 chr10 106110107 106110191 -34206574 + GA-rich Low_complexity Low_complexity 2 84 0 863 121 23 0 chr10 106111178 106111310 -34205455 + AluSp/q SINE Alu 167 301 -12 694 179 29 14 chr10 106111314 106111454 -34205311 + MLT1A2 LTR MaLR 165 306 -68 1948 169 112 21 chr10 106111521 106111697 -34205068 + L1ME LINE L1 4858 5017 -1157 2518 66 0 0 chr10 106111697 106112000 -34204765 - AluY SINE Alu -8 303 1 1948 169 112 21 chr10 106112000 106112411 -34204354 + L1ME LINE L1 5017 5502 -672 1241 142 9 27 chr10 106112434 106112680 -34204085 + AluJo SINE Alu 70 311 0 590 76 51 0 chr10 106112680 106112759 -34204006 + L1ME LINE L1 5483 5565 -601 * 1200 182 8 32 chr10 106112757 106113004 -34203761 + L1MB8 LINE L1 5915 6155 -23 1337 207 96 18 chr10 106114515 106114795 -34201970 + AluJb SINE Alu 1 302 0 209 200 0 0 chr10 106115091 106115126 -34201639 + (CA)n Simple_repeat Simple_repeat 2 36 0 254 329 12 0 chr10 106115235 106115320 -34201445 + L2 LINE L2 2236 2321 -993 324 293 18 7 chr10 106115426 106115551 -34201214 + MIR SINE MIR 5 130 -78 1643 184 7 14 chr10 106117117 106117411 -34199354 + AluJo SINE Alu 1 292 -20 387 332 64 96 chr10 106119707 106120020 -34196745 - L2 LINE L2 0 3272 2970 2434 97 0 0 chr10 106121088 106121397 -34195368 + AluSc SINE Alu 1 309 0 286 308 159 44 chr10 106121899 106122126 -34194639 - L2 LINE L2 -215 3057 2805 607 281 75 51 chr10 106122466 106122801 -34193964 - L1ME3A LINE L1 -297 5873 5531 400 348 98 37 chr10 106122870 106123195 -34193570 - L2 LINE L2 -665 2649 2305 2240 107 3 7 chr10 106123794 106124102 -34192663 - AluSx SINE Alu -5 307 1 2656 170 35 64 chr10 106124442 106124805 -34191960 + Charlie5 DNA MER1_type 18 390 -2234 905 190 105 20 chr10 106124805 106125005 -34191760 - MER20 DNA MER1_type 0 219 3 2656 170 35 64 chr10 106125005 106125070 -34191695 + Charlie5 DNA MER1_type 390 455 -2169 2187 122 3 0 chr10 106125070 106125381 -34191384 - AluSq SINE Alu -1 312 1 2656 170 35 64 chr10 106125381 106125543 -34191222 + Charlie5 DNA MER1_type 455 593 -2031 2103 124 0 26 chr10 106125543 106125849 -34190916 + AluSx SINE Alu 1 298 -14 2656 170 35 64 chr10 106125849 106125879 -34190886 + Charlie5 DNA MER1_type 593 622 -2002 1998 131 37 3 chr10 106125882 106126179 -34190586 - AluJb SINE Alu -5 307 1 629 155 0 0 chr10 106126180 106126283 -34190482 + L1MA2 LINE L1 6202 6304 0 345 174 288 0 chr10 106126294 106126426 -34190339 + Charlie5 DNA MER1_type 2447 2616 0 2220 120 0 7 chr10 106126867 106127168 -34189597 + AluSx SINE Alu 1 299 -13 2203 108 0 3 chr10 106127278 106127574 -34189191 + AluSx SINE Alu 1 295 -17 642 210 35 49 chr10 106127730 106127875 -34188890 + L1MC5 LINE L1 6720 6866 -1129 1634 181 27 0 chr10 106127875 106128168 -34188597 + AluJo SINE Alu 1 301 -11 2127 114 13 0 chr10 106128175 106128474 -34188291 + AluSx SINE Alu 1 303 -9 642 210 35 49 chr10 106128474 106128532 -34188233 + L1MC5 LINE L1 6872 6965 -1030 2409 87 3 0 chr10 106128533 106128832 -34187933 + AluSg SINE Alu 1 300 -10 1761 215 44 3 chr10 106128923 106129313 -34187452 - L1M4 LINE L1 -1821 4325 3920 1837 155 3 3 chr10 106129410 106129700 -34187065 - AluJo SINE Alu -22 290 1 207 0 0 0 chr10 106129758 106129781 -34186984 + (TC)n Simple_repeat Simple_repeat 2 24 0 1962 148 7 7 chr10 106129781 106130084 -34186681 - AluJb SINE Alu -9 303 1 2374 88 0 3 chr10 106130625 106130922 -34185843 + AluSg SINE Alu 1 296 -14 2326 96 10 3 chr10 106131002 106131304 -34185461 + AluSq SINE Alu 1 304 -9 2378 70 3 3 chr10 106132219 106132521 -34184244 - AluY SINE Alu -9 302 1 2625 185 19 40 chr10 106133037 106133555 -34183210 + MLT2B2 LTR ERVL 1 507 -8 2329 207 49 14 chr10 106133558 106134069 -34182696 - L1ME1 LINE L1 -48 6118 5590 2148 94 0 18 chr10 106134459 106134772 -34181993 - AluSx SINE Alu 0 308 1 199 183 0 33 chr10 106135605 106135665 -34181100 + CT-rich Low_complexity Low_complexity 3 60 0 228 329 0 40 chr10 106136532 106136608 -34180157 - L2 LINE L2 -74 3198 3126 1455 196 16 97 chr10 106137029 106137097 -34179668 + L1ME3 LINE L1 5767 5839 -323 2993 124 51 4 chr10 106137097 106137566 -34179199 + L1MB2 LINE L1 5679 6169 -2 1455 196 16 97 chr10 106137566 106137886 -34178879 + L1ME3 LINE L1 5839 6092 -70 4428 110 19 19 chr10 106137886 106138556 -34178209 + L1MA4A LINE L1 5628 6297 -6 1455 196 16 97 chr10 106138556 106138621 -34178144 + L1ME3 LINE L1 6092 6161 -1 1920 146 0 42 chr10 106138665 106138974 -34177791 - AluJo SINE Alu -16 296 1 224 364 11 0 chr10 106140379 106140467 -34176298 - MIR SINE MIR -65 143 55 * 738 222 43 16 chr10 106140466 106140651 -34176114 + L3 LINE CR1 651 840 -737 310 220 22 22 chr10 106140690 106140781 -34175984 + L1ME4a LINE L1 5980 6070 -51 2095 75 26 0 chr10 106140783 106141048 -34175717 - AluY SINE Alu -15 296 25 933 275 41 46 chr10 106144157 106144374 -34172391 - L1MEc LINE L1 -4551 1845 1629 871 165 0 0 chr10 106144374 106144501 -34172264 - FLAM_A SINE Alu -6 127 1 933 275 41 46 chr10 106144501 106144672 -34172093 - L1MEc LINE L1 -4767 1629 1459 2221 72 20 0 chr10 106144672 106144964 -34171801 - AluY SINE Alu -13 298 1 223 343 45 0 chr10 106144969 106145036 -34171729 + L2 LINE L2 3182 3251 -21 992 257 139 61 chr10 106145531 106145849 -34170916 + L1MDa LINE L1 1019 1311 -5310 450 0 0 0 chr10 106145849 106145899 -34170866 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 992 257 139 61 chr10 106145899 106146057 -34170708 + L1MDa LINE L1 1311 1455 -5166 2075 102 46 3 chr10 106146057 106146340 -34170425 - AluSg SINE Alu -15 295 1 992 257 139 61 chr10 106146340 106146922 -34169843 + L1MDa LINE L1 1455 2201 -4420 410 169 13 0 chr10 106146927 106147004 -34169761 + L1MB5 LINE L1 6091 6168 -6 221 211 0 53 chr10 106149792 106149815 -34166950 + A-rich Low_complexity Low_complexity 1 24 -48 2128 129 3 0 chr10 106149815 106150117 -34166648 + AluSx SINE Alu 1 303 -9 221 211 0 53 chr10 106150117 106150169 -34166596 + A-rich Low_complexity Low_complexity 24 72 0 1021 295 91 74 chr10 106150174 106150731 -34166034 + L3 LINE CR1 847 1420 -157 2174 110 3 7 chr10 106150731 106151039 -34165726 + AluSx SINE Alu 1 307 -5 1021 295 91 74 chr10 106151039 106151196 -34165569 + L3 LINE CR1 1420 1573 -4 186 71 0 0 chr10 106151278 106151306 -34165459 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1526 139 131 12 chr10 106151309 106151561 -34165204 - AluJo SINE Alu -30 282 1 23 0 0 0 chr10 106151680 106151703 -34165062 + AT_rich Low_complexity Low_complexity 1 23 0 826 122 0 32 chr10 106152770 106152893 -34163872 + FLAM_C SINE Alu 21 139 -4 1968 143 16 3 chr10 106152894 106153201 -34163564 + AluSx SINE Alu 1 311 -1 914 196 0 17 chr10 106153625 106153798 -34162967 + FRAM SINE Alu 1 169 -7 2387 96 0 0 chr10 106153832 106154134 -34162631 - AluSq SINE Alu -11 302 1 21 0 0 0 chr10 106154134 106154155 -34162610 + AT_rich Low_complexity Low_complexity 1 21 0 365 304 32 23 chr10 106154682 106154899 -34161866 + L1MDa LINE L1 2301 2519 -4202 1555 156 4 13 chr10 106154944 106155181 -34161584 - MER46A DNA MER2_type -1 235 1 1300 201 25 7 chr10 106155181 106155459 -34161306 + L1MB3 LINE L1 3746 4028 -2118 276 57 491 0 chr10 106155496 106155549 -34161216 - MADE1 DNA Mariner 0 80 2 988 236 87 0 chr10 106155939 106156180 -34160585 - MIR SINE MIR 0 262 1 2024 97 31 17 chr10 106156348 106156638 -34160127 + AluSq SINE Alu 1 294 -19 4548 162 39 50 chr10 106156655 106156740 -34160025 + L1MB3 LINE L1 4924 5008 -1175 802 203 0 0 chr10 106156740 106156868 -34159897 + FLAM_A SINE Alu 1 128 -5 4548 162 39 50 chr10 106156868 106158008 -34158757 + L1MB3 LINE L1 5008 6131 -52 2444 61 0 10 chr10 106158008 106158303 -34158462 + AluY SINE Alu 1 292 -19 4548 162 39 50 chr10 106158303 106158356 -34158409 + L1MB3 LINE L1 6131 6183 0 213 39 0 0 chr10 106160278 106160304 -34156461 + (TA)n Simple_repeat Simple_repeat 2 27 0 2422 97 0 0 chr10 106161312 106161620 -34155145 + AluSg SINE Alu 1 308 -2 1452 175 4 0 chr10 106161685 106161937 -34154828 + L1M3 LINE L1 5572 5824 -359 207 250 0 0 chr10 106214292 106214336 -34102429 + L2 LINE L2 2884 2927 -345 238 291 135 64 chr10 106214693 106214811 -34101954 - L1MC/D LINE L1 -1922 5886 5778 1820 169 0 3 chr10 106214811 106215106 -34101659 + AluSx SINE Alu 1 294 -18 238 291 135 64 chr10 106215106 106215313 -34101452 - L1MC/D LINE L1 -2030 5778 5538 972 160 41 139 chr10 106215360 106215557 -34101208 - AluJo SINE Alu -7 305 153 2334 73 0 13 chr10 106215557 106215859 -34100906 - AluSc SINE Alu -11 298 1 972 160 41 139 chr10 106215859 106215999 -34100766 - AluJo SINE Alu -159 153 1 2218 106 3 0 chr10 106216005 106216316 -34100449 - AluSp SINE Alu -1 312 1 2360 84 0 3 chr10 106216324 106216635 -34100130 - AluY SINE Alu -1 310 1 2196 98 3 13 chr10 106216866 106217181 -34099584 + AluSx SINE Alu 1 312 0 2524 39 0 7 chr10 106217539 106217848 -34098917 + AluY SINE Alu 1 307 -4 2342 65 13 7 chr10 106217856 106218162 -34098603 + AluY SINE Alu 1 308 -3 988 196 70 82 chr10 106218214 106218326 -34098439 + MLT1F1 LTR MaLR 176 288 -279 2158 90 0 20 chr10 106218326 106218625 -34098140 + AluSc SINE Alu 1 293 -16 988 196 70 82 chr10 106218625 106218782 -34097983 + MLT1F1 LTR MaLR 288 442 -125 1121 189 5 14 chr10 106218782 106218999 -34097766 + AluJo SINE Alu 1 215 -97 408 79 16 48 chr10 106219001 106219064 -34097701 + AluSq/x SINE Alu 83 143 -169 1751 130 0 4 chr10 106219065 106219319 -34097446 + AluSc SINE Alu 1 253 -56 315 173 0 0 chr10 106219320 106219372 -34097393 + AluSc SINE Alu 230 281 -18 2163 113 3 0 chr10 106219376 106219678 -34097087 - AluSx SINE Alu -9 303 1 333 0 0 0 chr10 106219703 106219740 -34097025 + (TA)n Simple_repeat Simple_repeat 1 37 0 2219 113 0 0 chr10 106220002 106220302 -34096463 + AluSx SINE Alu 1 300 -12 184 372 0 13 chr10 106220316 106220394 -34096371 - L2 LINE L2 -34 3279 3203 782 245 13 0 chr10 106220406 106220565 -34096200 - FRAM SINE Alu -4 162 2 2345 80 6 3 chr10 106220600 106220912 -34095853 + AluSq SINE Alu 1 313 0 1102 109 6 18 chr10 106221189 106221204 -34095561 + AluSc SINE Alu 119 133 -170 2196 97 3 7 chr10 106221204 106221504 -34095261 + AluSc SINE Alu 1 299 -10 1102 109 6 18 chr10 106221504 106221675 -34095090 + AluSc SINE Alu 133 303 0 682 165 50 0 chr10 106221690 106221811 -34094954 + FLAM_A SINE Alu 11 137 -5 1706 169 7 17 chr10 106221824 106222120 -34094645 + AluJo SINE Alu 9 301 -11 1847 101 83 0 chr10 106222121 106222399 -34094366 + AluSg SINE Alu 1 301 -9 2224 93 3 16 chr10 106222399 106222712 -34094053 + AluSg SINE Alu 1 309 -1 1286 98 0 0 chr10 106222754 106222927 -34093838 + AluSp SINE Alu 134 306 -7 2066 101 0 20 chr10 106222927 106223224 -34093541 + AluSx SINE Alu 1 291 -21 464 337 25 0 chr10 106223795 106223958 -34092807 + MIR SINE MIR 96 262 0 207 356 17 25 chr10 106224392 106224510 -34092255 - MIR SINE MIR -69 139 23 24 0 0 0 chr10 106226134 106226158 -34090607 + GC_rich Low_complexity Low_complexity 1 24 0 249 163 0 0 chr10 106226347 106226396 -34090369 + (CA)n Simple_repeat Simple_repeat 1 49 0 48 53 0 0 chr10 106226499 106226575 -34090190 + GC_rich Low_complexity Low_complexity 1 76 0 191 36 36 0 chr10 106228718 106228746 -34088019 + (CCTG)n Simple_repeat Simple_repeat 1 29 0 227 233 41 0 chr10 106228845 106228918 -34087847 + (CA)n Simple_repeat Simple_repeat 1 76 0 2192 100 3 0 chr10 106230278 106230569 -34086196 + AluSx SINE Alu 1 292 -20 273 29 0 0 chr10 106230811 106230845 -34085920 + (TG)n Simple_repeat Simple_repeat 2 35 0 211 156 0 44 chr10 106231651 106231696 -34085069 + CT-rich Low_complexity Low_complexity 2 44 0 248 206 44 0 chr10 106231761 106231829 -34084936 + GA-rich Low_complexity Low_complexity 3 73 0 216 253 0 27 chr10 106231952 106232027 -34084738 + GA-rich Low_complexity Low_complexity 1 73 0 32 57 0 0 chr10 106232070 106232123 -34084642 + GC_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr10 106232152 106232174 -34084591 + GC_rich Low_complexity Low_complexity 1 22 0 514 262 98 31 chr10 106234376 106234601 -34082164 + MIR SINE MIR 20 259 -3 1725 153 3 30 chr10 106234897 106235198 -34081567 - AluJo SINE Alu -19 293 1 208 284 193 0 chr10 106236374 106236462 -34080303 - L2 LINE L2 -10 3303 3199 32 43 0 0 chr10 106239154 106239200 -34077565 + AT_rich Low_complexity Low_complexity 1 46 0 441 0 0 0 chr10 106240174 106240223 -34076542 + (T)n Simple_repeat Simple_repeat 1 49 0 1862 139 0 52 chr10 106240776 106241086 -34075679 - AluSx SINE Alu -18 294 1 210 208 0 0 chr10 106241712 106241765 -34075000 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 357 287 11 0 chr10 106241775 106241869 -34074896 - L2 LINE L2 0 3313 3219 236 189 0 38 chr10 106242387 106242440 -34074325 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 1029 163 35 35 chr10 106242685 106242888 -34073877 - AluSg/x SINE Alu -13 299 97 1053 182 9 67 chr10 106242888 106242936 -34073829 + AluJb SINE Alu 72 121 -185 1941 155 0 0 chr10 106242936 106243232 -34073533 - AluSx SINE Alu -16 296 1 1053 182 9 67 chr10 106243232 106243431 -34073334 + AluJb SINE Alu 121 306 0 1816 145 7 11 chr10 106243433 106243716 -34073049 + AluSx SINE Alu 4 285 -27 770 189 0 49 chr10 106243812 106243955 -34072810 + FAM SINE Alu 18 153 -32 1964 142 0 16 chr10 106244536 106244845 -34071920 + AluSx SINE Alu 1 304 -8 2493 62 0 0 chr10 106244853 106245159 -34071606 + AluY SINE Alu 1 306 -5 865 181 0 0 chr10 106245272 106245416 -34071349 - FAM SINE Alu -22 163 20 1355 88 0 16 chr10 106245506 106245641 -34071124 + AluSq SINE Alu 1 134 -179 2331 81 0 7 chr10 106245641 106245951 -34070814 + AluY SINE Alu 1 308 -3 1355 88 0 16 chr10 106245951 106245997 -34070768 + AluSq SINE Alu 134 179 -134 291 271 114 21 chr10 106246023 106246056 -34070709 - L1MB1 LINE L1 -212 5956 5924 384 275 117 12 chr10 106246056 106246319 -34070446 - L1ME2 LINE L1 -241 5921 5632 293 347 50 80 chr10 106246452 106246581 -34070184 - L2 LINE L2 0 3272 3141 2042 125 10 0 chr10 106246581 106246886 -34069879 + AluSx SINE Alu 1 308 -4 293 347 50 80 chr10 106246886 106246917 -34069848 - L2 LINE L2 -131 3141 3111 1823 153 0 26 chr10 106246917 106247225 -34069540 - AluJb SINE Alu -12 300 1 293 347 50 80 chr10 106247225 106247400 -34069365 - L2 LINE L2 -161 3111 2946 1964 136 3 17 chr10 106247443 106247744 -34069021 + AluSx SINE Alu 1 297 -15 2136 83 31 3 chr10 106247746 106248035 -34068730 + AluSx SINE Alu 3 299 -13 2417 80 0 0 chr10 106248035 106248346 -34068419 + AluY SINE Alu 1 311 0 2000 99 51 7 chr10 106248512 106248804 -34067961 + AluSg SINE Alu 1 305 -5 2358 81 0 0 chr10 106248816 106249126 -34067639 + AluSg SINE Alu 1 310 0 1568 116 29 0 chr10 106249155 106249397 -34067368 + MER2 DNA MER2_type 22 270 -75 337 200 38 50 chr10 106249443 106249523 -34067242 + MER2 DNA MER2_type 266 344 -1 26 30 0 0 chr10 106249530 106249563 -34067202 + AT_rich Low_complexity Low_complexity 1 33 0 2484 77 0 10 chr10 106249563 106249875 -34066890 - AluY SINE Alu -2 309 1 893 215 12 0 chr10 106249889 106250061 -34066704 - FRAM SINE Alu -3 173 1 363 164 0 0 chr10 106250074 106250141 -34066624 - MIR SINE MIR -123 139 73 755 73 0 0 chr10 106250240 106250336 -34066429 + AluS SINE Alu 2 97 -215 187 331 42 48 chr10 106250337 106250503 -34066262 - L2 LINE L2 -530 2784 2620 2112 90 19 62 chr10 106250600 106250922 -34065843 + AluSx SINE Alu 3 310 -2 486 181 0 128 chr10 106251258 106251340 -34065425 + FLAM_A SINE Alu 4 60 -242 2490 70 7 3 chr10 106251340 106251642 -34065123 + AluY SINE Alu 1 303 -8 486 181 0 128 chr10 106251642 106251708 -34065057 + FLAM_A SINE Alu 60 133 -169 2159 136 0 3 chr10 106251783 106252092 -34064673 + AluSx SINE Alu 1 308 -4 1080 146 23 0 chr10 106252092 106252263 -34064502 + AluSg/x SINE Alu 132 306 -4 2098 120 0 51 chr10 106252267 106252412 -34064353 + AluSx SINE Alu 1 123 -189 2455 53 11 0 chr10 106252412 106252697 -34064068 + AluY SINE Alu 1 288 -23 2098 120 0 51 chr10 106252697 106252867 -34063898 + AluSx SINE Alu 123 300 -12 1478 182 52 7 chr10 106252876 106253167 -34063598 + AluJb SINE Alu 1 304 -8 1359 190 74 7 chr10 106253167 106253451 -34063314 - L1MB8 LINE L1 -57 6121 5819 421 139 0 0 chr10 106253451 106253523 -34063242 - FLAM_A SINE Alu -1 141 70 283 123 31 0 chr10 106253542 106253607 -34063158 - L1MB8 LINE L1 -351 5827 5761 1304 102 20 0 chr10 106253616 106253813 -34062952 - AluY SINE Alu 0 311 111 2381 79 0 0 chr10 106253925 106254215 -34062550 + AluSx SINE Alu 7 296 -16 5402 133 67 24 chr10 106254229 106255194 -34061571 + LTR13 LTR ERVK 1 1007 0 2682 37 0 0 chr10 106255327 106255626 -34061139 + AluY SINE Alu 1 299 -12 2084 135 10 0 chr10 106255760 106256048 -34060717 - AluSx SINE Alu -19 293 3 1380 160 118 4 chr10 106256136 106256396 -34060369 + AluJb SINE Alu 18 304 0 540 238 52 23 chr10 106256780 106256952 -34059813 + MIR SINE MIR 13 189 -73 1352 95 0 0 chr10 106257086 106257255 -34059510 - AluY SINE Alu 0 311 143 1283 127 11 0 chr10 106257355 106257544 -34059221 + AluY SINE Alu 119 309 -2 2041 105 34 34 chr10 106257557 106257852 -34058913 + AluSx SINE Alu 5 299 -13 2404 100 0 3 chr10 106258004 106258315 -34058450 + AluSx SINE Alu 1 310 -2 2345 113 3 0 chr10 106258332 106258643 -34058122 - AluSp SINE Alu -1 312 1 2180 117 3 3 chr10 106258858 106259157 -34057608 + AluSx SINE Alu 1 299 -13 280 222 22 22 chr10 106259225 106259315 -34057450 + LTR67 LTR ERVL 438 527 -30 992 174 0 6 chr10 106259317 106259489 -34057276 - FAM SINE Alu -4 171 1 184 307 125 11 chr10 106259565 106259653 -34057112 - L2 LINE L2 -4 3309 3212 1911 155 0 26 chr10 106259898 106260202 -34056563 + AluSx SINE Alu 1 296 -16 2030 117 4 4 chr10 106260204 106260485 -34056280 + AluSc SINE Alu 1 281 -28 193 0 61 30 chr10 106260555 106260588 -34056177 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 620 236 0 7 chr10 106261125 106261265 -34055500 + MIR SINE MIR 5 143 -119 279 133 0 0 chr10 106261309 106261354 -34055411 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 958 135 0 0 chr10 106261357 106261490 -34055275 - FLAM_C SINE Alu -10 133 1 391 244 146 0 chr10 106261491 106261614 -34055151 + L2 LINE L2 3173 3313 0 531 303 61 5 chr10 106264673 106264871 -34051894 - MIR SINE MIR -3 259 51 207 0 0 0 chr10 106266412 106266435 -34050330 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2351 95 14 0 chr10 106266441 106266737 -34050028 - AluSp SINE Alu -13 300 1 1092 207 100 32 chr10 106266737 106267017 -34049748 - AluJo SINE Alu -2 300 2 2267 88 26 7 chr10 106267319 106267497 -34049268 - AluY SINE Alu 0 311 123 216 0 0 0 chr10 106267497 106267521 -34049244 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2267 88 26 7 chr10 106267521 106267647 -34049118 - AluY SINE Alu -188 123 1 2304 94 19 19 chr10 106267647 106267956 -34048809 - AluSg SINE Alu -1 309 1 287 281 72 29 chr10 106268173 106268286 -34048479 + L2 LINE L2 3168 3290 -23 2259 98 3 0 chr10 106268286 106268595 -34048170 - AluSp SINE Alu 0 310 1 287 281 72 29 chr10 106268595 106268619 -34048146 + L2 LINE L2 3290 3312 -1 1858 149 22 4 chr10 106269039 106269314 -34047451 + AluJb SINE Alu 1 280 -32 243 0 0 0 chr10 106269314 106269341 -34047424 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2495 65 3 0 chr10 106271402 106271696 -34045069 + AluY SINE Alu 1 295 -16 1763 150 22 7 chr10 106271803 106272076 -34044689 + AluJb SINE Alu 4 280 -32 252 143 0 0 chr10 106272081 106272123 -34044642 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 801 141 45 58 chr10 106272504 106272638 -34044127 + FRAM SINE Alu 1 20 -156 2190 126 3 0 chr10 106272638 106272947 -34043818 + AluSg SINE Alu 1 310 0 801 141 45 58 chr10 106272947 106272968 -34043797 + FRAM SINE Alu 20 40 0 2360 93 7 3 chr10 106273185 106273487 -34043278 - AluSx SINE Alu -9 303 1 2099 108 7 20 chr10 106273491 106273788 -34042977 - AluSc SINE Alu -16 293 1 2372 84 0 0 chr10 106274211 106274524 -34042241 + AluSx SINE Alu 1 313 0 2029 148 13 7 chr10 106275024 106275322 -34041443 + AluJb SINE Alu 5 304 -8 183 80 0 0 chr10 106275322 106275347 -34041418 + (GGGGA)n Simple_repeat Simple_repeat 1 25 0 243 0 0 0 chr10 106275607 106275634 -34041131 + (A)n Simple_repeat Simple_repeat 1 27 0 971 121 43 0 chr10 106275644 106275784 -34040981 + AluSg/x SINE Alu 135 280 -30 198 0 0 0 chr10 106275784 106275806 -34040959 + (CA)n Simple_repeat Simple_repeat 1 22 0 657 111 162 26 chr10 106276009 106276126 -34040639 - FLAM_C SINE Alu 0 133 1 1426 196 42 89 chr10 106276297 106276440 -34040325 + MLT1C LTR MaLR 15 163 -304 2219 122 0 22 chr10 106276440 106276622 -34040143 - AluSx SINE Alu 0 312 138 2152 100 7 27 chr10 106276622 106276922 -34039843 - AluSc SINE Alu -15 294 1 2219 122 0 22 chr10 106276922 106277058 -34039707 - AluSx SINE Alu -174 138 1 1426 196 42 89 chr10 106277058 106277365 -34039400 + MLT1C LTR MaLR 163 459 -8 238 297 125 39 chr10 106277909 106278037 -34038728 - MIR SINE MIR -71 191 53 2436 87 7 0 chr10 106278139 106278439 -34038326 - AluSp SINE Alu -11 302 1 286 217 0 0 chr10 106278697 106278757 -34038008 + MIR SINE MIR 57 116 -146 2422 90 7 3 chr10 106278802 106279112 -34037653 - AluY SINE Alu 0 311 1 1872 139 36 0 chr10 106279115 106279395 -34037370 - AluJb SINE Alu -18 294 5 2504 158 26 8 chr10 106279402 106279870 -34036895 + LTR45B LTR ERV1 18 603 0 243 277 43 32 chr10 106279871 106279965 -34036800 + MIR SINE MIR 113 207 -55 1819 195 7 0 chr10 106280048 106280356 -34036409 - AluJo SINE Alu -2 310 1 216 0 0 0 chr10 106280356 106280380 -34036385 + (T)n Simple_repeat Simple_repeat 1 24 0 1986 169 0 0 chr10 106280682 106280984 -34035781 + AluJb SINE Alu 1 302 -10 2442 71 0 3 chr10 106280989 106281284 -34035481 + AluY SINE Alu 11 304 -7 2408 89 0 3 chr10 106281342 106281644 -34035121 - AluSq SINE Alu -12 301 1 2086 141 3 3 chr10 106282309 106282615 -34034150 + AluJb SINE Alu 7 312 0 689 182 8 15 chr10 106282621 106282753 -34034012 + AluJb SINE Alu 2 132 -180 2543 61 3 10 chr10 106283046 106283358 -34033407 - AluY SINE Alu -1 310 1 2477 34 7 20 chr10 106283365 106283663 -34033102 - AluY SINE Alu -17 294 1 1545 134 12 101 chr10 106283663 106283824 -34032941 - AluJb SINE Alu -3 299 125 261 0 0 0 chr10 106283824 106283853 -34032912 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 2338 68 0 0 chr10 106283853 106284131 -34032634 - AluSx SINE Alu -30 282 5 1545 134 12 101 chr10 106284131 106284296 -34032469 - AluJb SINE Alu -175 127 1 211 318 8 31 chr10 106284653 106284782 -34031983 + CT-rich Low_complexity Low_complexity 2 127 0 2326 97 0 7 chr10 106285394 106285692 -34031073 + AluSx SINE Alu 1 296 -16 216 254 32 0 chr10 106286330 106286393 -34030372 + MIR SINE MIR 84 148 -114 902 132 0 23 chr10 106286646 106286775 -34029990 - FLAM_C SINE Alu -17 126 1 724 302 53 8 chr10 106287233 106287478 -34029287 - MIR SINE MIR -1 261 6 2208 103 3 20 chr10 106287678 106287978 -34028787 - AluSx SINE Alu -17 295 1 2339 101 0 0 chr10 106288267 106288564 -34028201 + AluSg SINE Alu 1 297 -13 2185 113 0 0 chr10 106288872 106289198 -34027567 + AluSq SINE Alu 1 326 0 1961 88 92 0 chr10 106289198 106289501 -34027264 + AluSp SINE Alu 1 313 0 235 284 71 39 chr10 106290568 106290695 -34026070 + L1MC/D LINE L1 5610 5740 -2068 1024 149 23 17 chr10 106290773 106290948 -34025817 - AluJb SINE Alu 0 312 137 2423 87 3 3 chr10 106290957 106291266 -34025499 - AluSx SINE Alu -3 309 1 369 319 47 9 chr10 106291739 106291952 -34024813 + L2 LINE L2 2841 3061 -211 265 306 42 0 chr10 106292002 106292074 -34024691 + MIR SINE MIR 15 89 -173 1001 213 201 54 chr10 106292074 106292408 -34024357 + MLT1F LTR MaLR 1 383 -159 828 171 27 0 chr10 106292560 106292706 -34024059 + MLT1F LTR MaLR 418 567 0 355 338 7 0 chr10 106292716 106292855 -34023910 + MIR SINE MIR 19 158 -104 2337 111 3 3 chr10 106293190 106293496 -34023269 + AluSx SINE Alu 1 306 -6 721 191 0 8 chr10 106293803 106293934 -34022831 + FLAM_A SINE Alu 1 130 -3 2374 113 0 0 chr10 106293989 106294300 -34022465 + AluSx SINE Alu 1 311 -1 2248 78 41 3 chr10 106294726 106295021 -34021744 - AluYa5 SINE Alu -5 306 1 2182 98 28 0 chr10 106295945 106296231 -34020534 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 106296938 106296961 -34019804 + AT_rich Low_complexity Low_complexity 1 23 0 2314 92 10 3 chr10 106297048 106297343 -34019422 - AluY SINE Alu -14 297 1 2097 127 0 25 chr10 106297540 106297856 -34018909 + AluSx SINE Alu 1 308 -4 2196 100 4 0 chr10 106299306 106299607 -34017158 + AluSx SINE Alu 2 303 0 638 180 8 8 chr10 106300460 106300582 -34016183 - L2 LINE L2 -2 3311 3190 29 0 0 0 chr10 106301205 106301234 -34015531 + AT_rich Low_complexity Low_complexity 1 29 0 2207 110 0 10 chr10 106301533 106301834 -34014931 + AluSx SINE Alu 1 298 -14 2428 71 3 3 chr10 106301862 106302157 -34014608 + AluSc SINE Alu 1 295 -14 21 57 0 0 chr10 106303692 106303727 -34013038 + AT_rich Low_complexity Low_complexity 1 35 0 2317 105 0 0 chr10 106303747 106304042 -34012723 - AluSq SINE Alu -18 295 1 520 283 0 20 chr10 106304152 106304350 -34012415 + L1MC4 LINE L1 7700 7893 -149 2002 144 7 0 chr10 106304353 106304638 -34012127 + AluSg SINE Alu 1 287 -23 180 0 0 0 chr10 106304641 106304661 -34012104 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1330 153 7 69 chr10 106304879 106305027 -34011738 + L1MB3 LINE L1 5914 6070 -113 1926 140 0 38 chr10 106305027 106305341 -34011424 + AluJb SINE Alu 1 302 -10 1330 153 7 69 chr10 106305341 106305367 -34011398 + L1MB3 LINE L1 6070 6096 -87 2249 120 0 0 chr10 106305367 106305667 -34011098 - AluSx SINE Alu -12 300 1 1330 153 7 69 chr10 106305667 106305779 -34010986 + L1MB3 LINE L1 6096 6183 0 2106 111 0 0 chr10 106307229 106307509 -34009256 + AluSx SINE Alu 1 280 -32 387 0 0 0 chr10 106307511 106307554 -34009211 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1428 128 10 5 chr10 106307747 106307950 -34008815 - AluSq SINE Alu -109 204 1 2106 123 6 41 chr10 106309276 106309411 -34007354 + AluSx SINE Alu 1 139 -173 2246 96 23 0 chr10 106309411 106309712 -34007053 + AluY SINE Alu 1 308 -3 2106 123 6 41 chr10 106309712 106309892 -34006873 + AluSx SINE Alu 139 305 -7 420 214 102 0 chr10 106310449 106310547 -34006218 - L2 LINE L2 0 3313 3206 238 225 188 12 chr10 106310549 106310629 -34006136 + MIR SINE MIR 50 143 -65 707 187 8 0 chr10 106311222 106311345 -34005420 - FLAM_A SINE Alu -6 127 4 2194 109 16 3 chr10 106311373 106311677 -34005088 + AluSc SINE Alu 1 308 -1 21 0 0 0 chr10 106311821 106311842 -34004923 + AT_rich Low_complexity Low_complexity 1 21 0 2304 78 0 44 chr10 106312026 106312346 -34004419 + AluY SINE Alu 1 306 -5 2351 78 0 41 chr10 106312998 106313354 -34003411 - AluY SINE Alu 0 343 1 207 0 0 0 chr10 106315912 106315935 -34000830 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2497 77 3 0 chr10 106319881 106320179 -33996586 - AluSp SINE Alu -14 299 1 217 281 101 11 chr10 106320221 106320310 -33996455 + MIR SINE MIR 52 148 -114 1982 148 0 3 chr10 106320341 106320624 -33996141 + AluJb SINE Alu 1 282 -30 1163 172 38 14 chr10 106320640 106320849 -33995916 - MER46A DNA MER2_type -22 214 1 322 278 33 0 chr10 106320857 106320947 -33995818 + MIR SINE MIR 163 255 -7 3938 109 45 138 chr10 106322941 106323163 -33993602 + Tigger3(Golem) DNA MER2_type 1 242 -2787 2026 143 3 7 chr10 106323163 106323456 -33993309 + AluSx SINE Alu 1 292 -20 3938 109 45 138 chr10 106323456 106323546 -33993219 + Tigger3(Golem) DNA MER2_type 242 339 -2690 2211 127 0 0 chr10 106323546 106323838 -33992927 - AluSx SINE Alu -20 292 1 3938 109 45 138 chr10 106323838 106324135 -33992630 + Tigger3(Golem) DNA MER2_type 339 662 -2367 2546 54 0 3 chr10 106324135 106324433 -33992332 + AluY SINE Alu 1 297 -14 3938 109 45 138 chr10 106324433 106324464 -33992301 + Tigger3(Golem) DNA MER2_type 662 694 -2335 441 103 0 44 chr10 106324464 106324532 -33992233 + AluS SINE Alu 37 101 -211 3938 109 45 138 chr10 106324532 106324742 -33992023 + Tigger3(Golem) DNA MER2_type 694 922 -2107 2041 108 26 42 chr10 106324742 106324884 -33991881 + AluSx SINE Alu 1 144 -168 2473 42 13 32 chr10 106324884 106325194 -33991571 + AluY SINE Alu 1 304 -7 2041 108 26 42 chr10 106325194 106325357 -33991408 + AluSx SINE Alu 144 301 -11 3938 109 45 138 chr10 106325357 106325576 -33991189 + Tigger3(Golem) DNA MER2_type 922 1160 -1869 1760 160 3 14 chr10 106325576 106325870 -33990895 - AluJo SINE Alu -21 291 1 1771 161 7 45 chr10 106325875 106326040 -33990725 - AluJo SINE Alu -14 298 149 2507 68 3 0 chr10 106326040 106326336 -33990429 - AluY SINE Alu -14 297 1 1771 161 7 45 chr10 106326336 106326480 -33990285 - AluJo SINE Alu -163 149 1 3938 109 45 138 chr10 106326480 106326716 -33990049 + Tigger3(Golem) DNA MER2_type 1164 3027 -2 199 236 0 18 chr10 106326755 106326810 -33989955 - MER5B DNA MER1_type 0 178 125 1540 44 0 0 chr10 106326819 106326999 -33989766 + AluY SINE Alu 119 298 -13 206 267 33 22 chr10 106327029 106327119 -33989646 - L2 LINE L2 -209 3063 2973 742 179 0 0 chr10 106327130 106327253 -33989512 + FLAM_C SINE Alu 6 128 -15 273 57 0 0 chr10 106327410 106327445 -33989320 + (T)n Simple_repeat Simple_repeat 1 35 0 187 205 26 0 chr10 106327951 106327990 -33988775 + L2 LINE L2 3143 3182 -90 1825 154 7 0 chr10 106328136 106328415 -33988350 + AluJo SINE Alu 1 281 -31 2212 120 0 0 chr10 106329160 106329468 -33987297 - AluSx SINE Alu 0 312 5 2081 135 13 13 chr10 106329475 106329787 -33986978 - AluSx SINE Alu 0 312 1 2103 130 3 0 chr10 106329787 106330079 -33986686 - AluSx SINE Alu -11 301 9 2244 61 3 44 chr10 106330170 106330502 -33986263 - AluY SINE Alu 0 320 1 1110 79 0 0 chr10 106330505 106330645 -33986120 - AluSg/x SINE Alu -15 297 158 221 226 19 0 chr10 106330740 106330793 -33985972 + MIR SINE MIR 63 116 -146 1840 124 95 4 chr10 106330806 106331080 -33985685 + AluJb SINE Alu 1 299 -13 2388 87 0 0 chr10 106331098 106331398 -33985367 - AluSx SINE Alu -7 305 6 2059 130 10 3 chr10 106331938 106332238 -33984527 + AluSx SINE Alu 1 302 -10 225 271 132 83 chr10 106332586 106332627 -33984138 - MER5A DNA MER1_type -1 188 150 1413 148 9 0 chr10 106332627 106332844 -33983921 - MER20 DNA MER1_type 0 219 1 225 271 132 83 chr10 106332844 106332875 -33983890 - MER5A DNA MER1_type -39 150 122 1968 146 3 7 chr10 106332875 106333176 -33983589 + AluJb SINE Alu 1 300 -12 225 271 132 83 chr10 106333176 106333246 -33983519 - MER5A DNA MER1_type -67 122 38 347 216 27 0 chr10 106333899 106333973 -33982792 + MIR SINE MIR 1 76 -186 2238 98 16 10 chr10 106333983 106334290 -33982475 - AluSp SINE Alu -4 309 1 459 195 25 0 chr10 106334292 106334410 -33982355 + CT-rich Low_complexity Low_complexity 2 122 0 524 194 124 0 chr10 106334419 106334548 -33982217 + MIR SINE MIR 116 260 -2 2337 103 0 0 chr10 106334548 106334850 -33981915 - AluSp SINE Alu -11 302 1 392 283 51 0 chr10 106334851 106334989 -33981776 - L1ME3 LINE L1 -283 5879 5735 858 291 173 3 chr10 106335072 106335454 -33981311 + L2 LINE L2 2867 3313 0 1921 136 20 0 chr10 106335513 106335807 -33980958 - AluSx SINE Alu -10 302 3 251 217 17 17 chr10 106335819 106335879 -33980886 + CT-rich Low_complexity Low_complexity 2 61 0 1894 149 31 3 chr10 106335999 106336288 -33980477 + AluJb SINE Alu 1 297 -15 2307 62 65 3 chr10 106336288 106336579 -33980186 + AluY SINE Alu 1 309 -2 1211 134 0 0 chr10 106336579 106336743 -33980022 + AluSg/x SINE Alu 132 295 -15 281 317 92 14 chr10 106337284 106337426 -33979339 - MIR3 SINE MIR -26 182 30 2313 98 3 0 chr10 106337575 106337872 -33978893 - AluSp SINE Alu -15 298 1 2234 109 6 16 chr10 106338715 106339027 -33977738 + AluSg SINE Alu 1 309 -1 508 29 29 0 chr10 106339547 106339617 -33977148 + (TA)n Simple_repeat Simple_repeat 1 72 0 1695 166 17 7 chr10 106340249 106340545 -33976220 - L1MC1 LINE L1 -9 6324 6026 2334 99 0 0 chr10 106341247 106341539 -33975226 + AluSg SINE Alu 1 292 -18 2105 136 10 7 chr10 106341649 106341951 -33974814 + AluJb SINE Alu 1 303 -9 259 315 31 16 chr10 106341954 106342081 -33974684 - MIR SINE MIR -12 250 122 2611 66 0 0 chr10 106342296 106342600 -33974165 + AluY SINE Alu 1 304 -7 1391 182 22 71 chr10 106342800 106343124 -33973641 + AluJo SINE Alu 1 308 -4 2053 148 0 7 chr10 106343206 106343516 -33973249 + AluSx SINE Alu 1 308 -4 1868 117 0 78 chr10 106343615 106343803 -33972962 - AluSx SINE Alu 0 305 104 6780 60 13 20 chr10 106343803 106345310 -33971455 - SVA Other Other -839 1386 7 1920 101 38 21 chr10 106345314 106345601 -33971164 - AluY SINE Alu -19 292 1 1868 117 0 78 chr10 106345601 106345735 -33971030 - AluSx SINE Alu -204 101 1 226 26 79 0 chr10 106345735 106345773 -33970992 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1142 118 0 0 chr10 106345776 106345929 -33970836 - AluSp SINE Alu -25 288 136 2536 75 0 0 chr10 106346028 106346335 -33970430 - AluY SINE Alu -4 307 1 2422 67 7 3 chr10 106346972 106347270 -33969495 + AluY SINE Alu 1 299 -12 2327 88 3 0 chr10 106347991 106348276 -33968489 + AluSx SINE Alu 2 287 -25 273 261 46 0 chr10 106348353 106348418 -33968347 - L2 LINE L2 -4 3268 3201 2307 85 3 0 chr10 106348651 106348944 -33967821 + AluY SINE Alu 1 294 -17 268 187 173 0 chr10 106349020 106349095 -33967670 + MIR SINE MIR 91 178 -84 613 269 30 35 chr10 106349315 106349512 -33967253 - MIR SINE MIR -1 261 66 22 0 0 0 chr10 106349578 106349600 -33967165 + AT_rich Low_complexity Low_complexity 1 22 0 1967 118 7 21 chr10 106349605 106349929 -33966836 + AluSg SINE Alu 1 320 0 2227 94 3 3 chr10 106349955 106350262 -33966503 - AluSq SINE Alu 0 307 1 2034 156 3 0 chr10 106350468 106350776 -33965989 + AluJb SINE Alu 1 309 -3 3931 142 23 48 chr10 106351451 106351514 -33965251 - L1MB7 LINE L1 0 6184 6121 1884 163 0 10 chr10 106351514 106351820 -33964945 + AluJb SINE Alu 1 303 -9 3931 142 23 48 chr10 106351820 106352283 -33964482 - L1MB7 LINE L1 -63 6121 5677 751 179 0 8 chr10 106352283 106352423 -33964342 - FLAM_C SINE Alu 0 139 1 3931 142 23 48 chr10 106352423 106352620 -33964145 - L1MB7 LINE L1 -507 5677 5477 525 189 61 0 chr10 106352621 106352753 -33964012 - L1MB7 LINE L1 -778 5368 5229 32 43 0 0 chr10 106352868 106352914 -33963851 + AT_rich Low_complexity Low_complexity 1 46 0 326 350 128 30 chr10 106352986 106353383 -33963382 + L2 LINE L2 2193 2628 -686 2391 99 0 0 chr10 106353388 106353692 -33963073 - AluSx SINE Alu -8 304 1 430 188 35 12 chr10 106353693 106353778 -33962987 - L2 LINE L2 0 3272 3186 303 322 53 67 chr10 106353803 106354160 -33962605 + L2 LINE L2 2626 2977 -337 286 230 115 50 chr10 106354280 106354419 -33962346 + L2 LINE L2 3165 3312 -1 1452 175 29 21 chr10 106354745 106355058 -33961707 + AluJo SINE Alu 2 316 0 1899 86 0 125 chr10 106355853 106356189 -33960576 - AluSc SINE Alu -13 296 3 2071 137 0 7 chr10 106356219 106356518 -33960247 - AluSg SINE Alu -11 299 3 2009 95 8 0 chr10 106357484 106357747 -33959018 - AluSp SINE Alu -14 299 35 205 298 43 32 chr10 106357782 106357876 -33958889 - MIR SINE MIR -55 207 113 1039 219 39 16 chr10 106357877 106358168 -33958597 - LTR45B LTR ERV1 0 783 197 789 124 15 0 chr10 106408181 106408318 -33908447 - LOR1-int LTR ERV1 -2657 5463 5325 2352 105 0 0 chr10 106408318 106408614 -33908151 + AluSx SINE Alu 1 296 -16 2040 120 0 0 chr10 106408643 106408910 -33907855 + AluSx SINE Alu 31 297 -15 2320 78 27 66 chr10 106408910 106409011 -33907754 - LOR1-int LTR ERV1 -2788 5332 5229 2125 107 7 0 chr10 106409011 106409311 -33907454 + AluSp SINE Alu 1 302 0 2320 78 27 66 chr10 106409311 106409618 -33907147 - LOR1-int LTR ERV1 -2891 5229 4939 938 170 0 7 chr10 106409618 106409765 -33907000 - AluSc SINE Alu -16 293 148 336 138 0 31 chr10 106409765 106409830 -33906935 + MER52C LTR ERV1 226 288 -990 * 2736 195 111 105 chr10 106409822 106410985 -33905780 + MER52A LTR ERV1 117 1278 0 5815 123 36 3 chr10 106410986 106411962 -33904803 - LOR1b-int LTR ERV1 -6910 1210 203 1613 171 39 13 chr10 106411930 106412239 -33904526 - LOR1b-int LTR ERV1 -7702 418 102 * 906 132 26 33 chr10 106412252 106412323 -33904442 + AluSg/x SINE Alu 135 205 -114 3256 131 53 90 chr10 106412323 106412704 -33904061 - LTR9 LTR ERV1 0 612 262 1533 126 0 0 chr10 106412704 106412911 -33903854 - AluSq SINE Alu 0 313 107 3256 131 53 90 chr10 106412911 106413164 -33903601 - LTR9 LTR ERV1 -350 262 1 906 132 26 33 chr10 106413164 106413278 -33903487 + AluSg/x SINE Alu 205 319 0 543 138 46 0 chr10 106413280 106413367 -33903398 - LOR1b-int LTR ERV1 -8028 92 2 2424 164 37 26 chr10 106413368 106413824 -33902941 - LOR1b LTR ERV1 0 461 1 1626 100 36 16 chr10 106413828 106414079 -33902686 - L1PA13 LINE L1 -1 6162 5907 2067 140 48 25 chr10 106414079 106414435 -33902330 + THE1B LTR MaLR 1 364 0 5056 79 3 31 chr10 106414435 106414620 -33902145 + THE1B-int LTR MaLR 1 190 -1390 2270 102 10 0 chr10 106414620 106414913 -33901852 + AluSp SINE Alu 1 296 -17 5056 79 3 31 chr10 106414913 106415163 -33901602 + THE1B-int LTR MaLR 190 446 -1134 2516 63 3 3 chr10 106415163 106415466 -33901299 - AluY SINE Alu -8 303 1 5056 79 3 31 chr10 106415466 106415760 -33901005 + THE1B-int LTR MaLR 446 710 -870 811 119 126 21 chr10 106415761 106415904 -33900861 + AluSg/x SINE Alu 154 311 -1 2268 101 7 0 chr10 106415904 106416202 -33900563 + AluY SINE Alu 1 300 -11 2276 79 4 0 chr10 106416208 106416516 -33900249 + AluSg1 SINE Alu 1 309 0 2251 112 3 3 chr10 106416563 106416866 -33899899 + AluSx SINE Alu 1 303 -9 403 147 0 0 chr10 106416909 106416977 -33899788 - MER4B-int LTR ERV1 -3112 3646 3579 4512 107 63 16 chr10 106417003 106417262 -33899503 + MER4-int LTR ERV1 5802 6047 -551 2462 50 0 20 chr10 106417262 106417589 -33899176 - AluY SINE Alu 0 311 1 4512 107 63 16 chr10 106417589 106418089 -33898676 + MER4-int LTR ERV1 6047 6597 -1 2241 120 0 0 chr10 106418097 106418398 -33898367 + AluSx SINE Alu 4 304 -8 1036 145 30 30 chr10 106418399 106418599 -33898166 - MER2 DNA MER2_type -144 201 2 811 222 91 37 chr10 106418682 106418852 -33897913 + MIR SINE MIR 7 166 -96 258 105 0 0 chr10 106418852 106418890 -33897875 + (TA)n Simple_repeat Simple_repeat 2 39 0 1959 98 40 14 chr10 106418890 106419166 -33897599 - AluSc SINE Alu -26 283 1 811 222 91 37 chr10 106419166 106419237 -33897528 + MIR SINE MIR 165 262 0 975 128 13 0 chr10 106419257 106419413 -33897352 + MER46B DNA MER2_type 4 36 -200 813 138 0 0 chr10 106419413 106419529 -33897236 - AluJb SINE Alu -16 296 181 1481 148 4 0 chr10 106419529 106419758 -33897007 - AluSg/x SINE Alu -5 305 76 2420 68 17 0 chr10 106419992 106420288 -33896477 + AluY SINE Alu 5 305 -6 456 91 26 26 chr10 106420655 106420732 -33896033 + Alu SINE Alu 226 302 -10 2549 56 0 34 chr10 106421704 106422026 -33894739 + AluY SINE Alu 1 311 0 892 143 17 63 chr10 106422222 106422397 -33894368 + AluJb SINE Alu 129 295 -17 342 200 56 94 chr10 106422405 106422565 -33894200 + L1MC5 LINE L1 7764 7917 -44 2542 71 0 0 chr10 106422591 106422902 -33893863 + AluY SINE Alu 1 311 0 821 156 0 30 chr10 106422924 106423059 -33893706 + AluJo/FLAM SINE Alu 3 133 -169 2408 61 3 3 chr10 106423060 106423354 -33893411 + AluY SINE Alu 1 294 -17 2484 70 0 13 chr10 106423354 106423669 -33893096 + AluY SINE Alu 1 311 0 568 203 37 49 chr10 106423699 106423862 -33892903 + MLT1A2 LTR MaLR 4 164 -210 531 134 0 37 chr10 106423867 106423940 -33892825 + AluSg SINE Alu 3 75 -235 2315 59 0 7 chr10 106423940 106424266 -33892499 - AluY SINE Alu 0 324 1 2471 80 10 3 chr10 106424747 106425058 -33891707 - AluSq SINE Alu 0 313 1 239 247 59 47 chr10 106425259 106425344 -33891421 + MIR SINE MIR 44 129 -79 973 191 38 0 chr10 106425346 106425529 -33891236 + MER20 DNA MER1_type 2 191 -28 359 207 122 0 chr10 106425939 106426021 -33890744 - MIR SINE MIR -12 250 159 682 178 13 86 chr10 106426051 106426203 -33890562 - AluJb SINE Alu -16 296 156 1243 91 53 215 chr10 106426243 106426606 -33890159 + AluJo SINE Alu 1 308 0 1923 158 17 3 chr10 106426884 106427181 -33889584 + AluJb SINE Alu 1 301 -11 2166 88 0 0 chr10 106427187 106427450 -33889315 + AluSg1 SINE Alu 1 263 -46 1767 141 74 32 chr10 106427450 106427827 -33888938 + L1MB2 LINE L1 5779 6171 0 506 284 104 23 chr10 106427830 106428183 -33888582 + L1MC/D LINE L1 5426 5822 -299 2416 78 3 13 chr10 106428358 106428666 -33888099 - AluSx SINE Alu -7 305 1 510 224 15 134 chr10 106428769 106428904 -33887861 - MER5B DNA MER1_type -1 177 72 5976 39 7 9 chr10 106428904 106429640 -33887125 - L1PA5 LINE L1 0 6154 5421 510 224 15 134 chr10 106429640 106429705 -33887060 - MER5B DNA MER1_type -106 72 1 902 202 114 10 chr10 106429713 106429906 -33886859 - MER58C DNA MER1_type 0 215 3 1603 215 20 3 chr10 106432429 106432722 -33884043 + AluJb SINE Alu 1 298 -14 1128 217 85 11 chr10 106434082 106434384 -33882381 + MLT1F1 LTR MaLR 1 313 -229 266 71 0 24 chr10 106434695 106434737 -33882028 + (CTG)n Simple_repeat Simple_repeat 2 42 0 1770 106 128 28 chr10 106434866 106435148 -33881617 - AluSg SINE Alu 0 310 1 1994 119 16 33 chr10 106437228 106437531 -33879234 + AluSq SINE Alu 1 298 -15 676 155 0 85 chr10 106437539 106437668 -33879097 + FLAM_C SINE Alu 1 118 -15 2023 112 59 0 chr10 106437821 106438108 -33878657 + AluSx SINE Alu 1 304 -8 2039 123 20 14 chr10 106438150 106438443 -33878322 + AluSg SINE Alu 1 295 -15 531 114 133 19 chr10 106438451 106438556 -33878209 + FLAM_C SINE Alu 1 117 -16 360 153 0 23 chr10 106438561 106438636 -33878129 - AluSp/q SINE Alu -1 302 238 2358 64 10 14 chr10 106438643 106438938 -33877827 + AluSp SINE Alu 9 302 -11 993 192 12 0 chr10 106438938 106439110 -33877655 + AluJo/FRAM SINE Alu 134 307 -5 1875 123 16 55 chr10 106439132 106439440 -33877325 + AluSq SINE Alu 1 296 -17 396 256 58 64 chr10 106439470 106439578 -33877187 + MIR SINE MIR 89 197 -65 2255 89 6 42 chr10 106439578 106439891 -33876874 + AluSx SINE Alu 1 302 -10 396 256 58 64 chr10 106439891 106439954 -33876811 + MIR SINE MIR 197 259 -3 2466 86 13 0 chr10 106439988 106440291 -33876474 + AluSx SINE Alu 1 307 -5 412 230 143 65 chr10 106440673 106440890 -33875875 - MIR SINE MIR -26 236 3 1828 165 0 16 chr10 106442535 106442838 -33873927 + AluJb SINE Alu 1 298 -14 2295 104 0 22 chr10 106442838 106443155 -33873610 + AluSx SINE Alu 1 311 -1 246 173 148 25 chr10 106443207 106443288 -33873477 - L2 LINE L2 0 3272 3182 206 295 16 0 chr10 106443406 106443467 -33873298 + MER5A DNA MER1_type 128 189 0 2317 91 7 3 chr10 106444213 106444510 -33872255 - AluSg SINE Alu -12 298 1 238 208 0 0 chr10 106445499 106445552 -33871213 + GA-rich Low_complexity Low_complexity 1 53 0 294 335 97 75 chr10 106447739 106448067 -33868698 + L2 LINE L2 2765 3084 -188 2451 87 0 3 chr10 106448067 106448377 -33868388 - AluY SINE Alu -1 310 2 2241 97 7 13 chr10 106448378 106448676 -33868089 - AluSx SINE Alu -16 296 1 294 335 97 75 chr10 106448676 106448840 -33867925 + L2 LINE L2 3083 3272 0 234 339 46 15 chr10 106449885 106450015 -33866750 + L2 LINE L2 2716 2849 -465 194 349 0 16 chr10 106450254 106450317 -33866448 + L2 LINE L2 2992 3053 -219 2437 93 0 0 chr10 106450341 106450642 -33866123 - AluSg SINE Alu -9 301 1 827 133 0 70 chr10 106451110 106451247 -33865518 + FLAM_A SINE Alu 1 128 0 2441 78 10 0 chr10 106451247 106451554 -33865211 + AluSg SINE Alu 1 310 0 2168 99 32 0 chr10 106451565 106451848 -33864917 + AluSc SINE Alu 6 297 -12 1621 167 0 65 chr10 106454190 106454496 -33862269 - AluJo SINE Alu -18 294 9 2092 141 41 8 chr10 106454931 106455293 -33861472 - THE1C LTR MaLR -1 374 1 561 13 39 0 chr10 106456293 106456371 -33860394 + (TAGA)n Simple_repeat Simple_repeat 3 83 0 2282 83 0 24 chr10 106456604 106456929 -33859836 - AluY SINE Alu 0 318 1 1759 115 10 4 chr10 106456929 106457221 -33859544 + LOR1b-int LTR ERV1 5419 6064 -1012 621 121 0 0 chr10 106457220 106457311 -33859454 + LOR1b-int LTR ERV1 8030 8120 0 * 2353 181 41 0 chr10 106457311 106457754 -33859011 + LOR1b LTR ERV1 1 461 0 3122 177 38 28 chr10 106457773 106458410 -33858355 + L1M2b LINE L1 1 643 -6566 1150 124 3 1 chr10 106458448 106458644 -33858121 + L1MA4A LINE L1 6016 6215 -82 1803 127 70 0 chr10 106459264 106459523 -33857242 + AluSx SINE Alu 1 277 -35 1541 310 54 50 chr10 106459628 106460659 -33856106 - BaEV-int LTR ERV1 -274 6375 5340 285 75 0 0 chr10 106460662 106460702 -33856063 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 2322 122 0 0 chr10 106460710 106461022 -33855743 - AluSx SINE Alu 0 312 1 328 295 18 0 chr10 106461483 106461595 -33855170 - BaEV-int LTR ERV1 -1801 4848 4735 2315 336 27 50 chr10 106461816 106462232 -33854533 - BaEV-int LTR ERV1 -2027 5758 5334 2448 80 0 3 chr10 106462232 106462532 -33854233 - AluY SINE Alu -12 299 1 2315 336 27 50 chr10 106462532 106463333 -33853432 - BaEV-int LTR ERV1 -2451 5334 4517 2319 111 0 0 chr10 106463333 106463661 -33853104 - AluSq SINE Alu 0 313 1 2315 336 27 50 chr10 106463661 106464559 -33852206 - BaEV-int LTR ERV1 -3268 4517 2694 1501 113 0 5 chr10 106464560 106464782 -33851983 - pTR5 LTR ERV1 -2046 392 172 330 273 10 0 chr10 106464784 106464883 -33851882 - LTR30 LTR ERV1 -79 643 544 5686 144 67 100 chr10 106464887 106466209 -33850556 - pTR5 LTR ERV1 -417 2021 743 865 324 31 25 chr10 106466292 106466774 -33849991 - BaEV-int LTR ERV1 -4129 3656 3172 1856 302 52 37 chr10 106466838 106468188 -33848577 - BaEV-int LTR ERV1 -4604 2045 936 593 315 5 27 chr10 106468367 106468586 -33848179 - BaEV-int LTR ERV1 -6782 1003 790 415 307 80 6 chr10 106468837 106469013 -33847752 - BaEV-int LTR ERV1 -6279 370 182 642 73 0 27 chr10 106469643 106469753 -33847012 + L1MA4A LINE L1 6197 6303 0 359 254 96 10 chr10 106469758 106469946 -33846819 + L1M4 LINE L1 3028 3237 -2909 2442 85 0 0 chr10 106469946 106470240 -33846525 + AluSc SINE Alu 1 294 -15 359 254 96 10 chr10 106470240 106470260 -33846505 + L1M4 LINE L1 3237 3254 -2892 2168 145 3 0 chr10 106470265 106470575 -33846190 + AluSq SINE Alu 1 311 -2 959 143 39 7 chr10 106470578 106470732 -33846033 + AluJb SINE Alu 144 302 -10 2512 81 3 3 chr10 106470732 106471041 -33845724 + AluSq SINE Alu 1 309 -4 837 218 78 0 chr10 106471041 106471234 -33845531 + L1MB4 LINE L1 5930 6137 -43 255 85 0 0 chr10 106471232 106471279 -33845486 + L1PA2 LINE L1 6108 6154 -1 * 2414 91 0 7 chr10 106471302 106471610 -33845155 + AluY SINE Alu 1 306 -5 2634 53 0 0 chr10 106471691 106471991 -33844774 + AluY SINE Alu 1 300 -11 1129 273 60 47 chr10 106472036 106472336 -33844429 + LTR33 LTR ERVL 11 322 -199 2121 111 3 10 chr10 106472336 106472654 -33844111 + AluSq SINE Alu 1 316 0 1129 273 60 47 chr10 106472654 106472839 -33843926 + LTR33 LTR ERVL 322 503 -18 2279 99 3 3 chr10 106473922 106474215 -33842550 + AluSx SINE Alu 1 293 -19 990 131 29 18 chr10 106474216 106474438 -33842327 + Tigger4(Zombi) DNA MER2_type 2502 2731 0 840 137 0 0 chr10 106475088 106475205 -33841560 + AluJb SINE Alu 3 119 -193 1125 102 60 24 chr10 106475265 106475431 -33841334 - AluSc SINE Alu -14 295 124 1180 134 0 6 chr10 106475474 106475645 -33841120 - AluSq SINE Alu -23 290 121 2136 84 4 0 chr10 106475909 106476172 -33840593 - AluSp SINE Alu -26 287 24 2423 93 3 0 chr10 106476172 106476482 -33840283 + AluY SINE Alu 1 311 0 281 274 0 12 chr10 106476719 106476803 -33839962 - L1ME4a LINE L1 -79 6042 5960 347 217 101 23 chr10 106476874 106477003 -33839762 - L1ME4a LINE L1 -188 5933 5795 2405 113 0 0 chr10 106477331 106477642 -33839123 - AluSx SINE Alu -1 311 1 2205 134 0 0 chr10 106477716 106478023 -33838742 - AluSx SINE Alu -5 307 1 812 116 20 7 chr10 106478389 106478535 -33838230 - L1MA5A LINE L1 -3 6294 6147 1230 209 59 0 chr10 106478630 106478869 -33837896 + AluJb SINE Alu 1 253 -59 1818 123 0 26 chr10 106478869 106479137 -33837628 - AluSx SINE Alu -51 261 1 207 0 0 0 chr10 106479137 106479160 -33837605 + (T)n Simple_repeat Simple_repeat 1 23 0 331 288 108 23 chr10 106479889 106480227 -33836538 - L1ME4a LINE L1 -423 5698 5332 224 188 0 42 chr10 106480231 106480279 -33836486 - L2 LINE L2 -11 3261 3216 207 213 43 0 chr10 106480791 106480838 -33835927 - L2 LINE L2 -584 2730 2682 2416 87 0 3 chr10 106480992 106481304 -33835461 + AluSx SINE Alu 1 311 -1 575 244 69 42 chr10 106481328 106481374 -33835391 - MIR SINE MIR 0 262 219 801 146 0 29 chr10 106481374 106481511 -33835254 - FLAM_C SINE Alu 0 133 1 575 244 69 42 chr10 106481511 106481681 -33835084 - MIR SINE MIR -43 219 40 228 304 11 11 chr10 106481804 106481896 -33834869 - L2 LINE L2 -941 2373 2282 1051 228 10 0 chr10 106482260 106482462 -33834303 + AluSx SINE Alu 9 212 -100 1956 136 7 17 chr10 106482583 106482877 -33833888 + AluSx SINE Alu 9 299 -13 228 302 0 0 chr10 106482878 106482931 -33833834 - L2 LINE L2 -86 3186 3134 2216 133 0 3 chr10 106483078 106483386 -33833379 - AluSx SINE Alu -5 307 1 2118 110 3 60 chr10 106483386 106483702 -33833063 - AluJb SINE Alu -13 299 1 303 333 33 44 chr10 106483888 106484068 -33832697 - MIR SINE MIR -53 209 33 201 133 0 0 chr10 106484087 106484117 -33832648 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 2661 46 0 3 chr10 106484185 106484490 -33832275 - AluY SINE Alu -7 304 1 189 256 0 0 chr10 106484580 106484623 -33832142 + MER5A DNA MER1_type 91 133 -56 21 0 0 0 chr10 106486209 106486230 -33830535 + GC_rich Low_complexity Low_complexity 1 21 0 492 231 54 15 chr10 106486948 106487078 -33829687 - MIR SINE MIR -86 176 42 201 258 54 32 chr10 106489318 106489411 -33827354 - MIR SINE MIR -55 153 59 189 74 0 0 chr10 106490200 106490227 -33826538 + (CGG)n Simple_repeat Simple_repeat 2 28 0 21 57 0 0 chr10 106490262 106490297 -33826468 + GC_rich Low_complexity Low_complexity 1 35 0 233 250 158 0 chr10 106491839 106491915 -33824850 + L2 LINE L2 3225 3312 -1 2421 83 3 0 chr10 106491928 106492229 -33824536 + AluSx SINE Alu 1 302 -10 209 334 108 9 chr10 106492489 106492616 -33824149 - MIR SINE MIR -64 144 16 26 30 0 0 chr10 106492619 106492652 -33824113 + AT_rich Low_complexity Low_complexity 1 33 0 2476 96 0 0 chr10 106492819 106493131 -33823634 - AluSx SINE Alu 0 312 1 1373 132 14 5 chr10 106494787 106495007 -33821758 + AluY SINE Alu 1 222 -89 239 349 0 0 chr10 106495157 106495223 -33821542 + C-rich Low_complexity Low_complexity 1 66 0 489 258 29 47 chr10 106495426 106495618 -33821147 + MIR SINE MIR 18 206 -56 346 277 0 0 chr10 106495659 106495742 -33821023 - L2 LINE L2 -2 3270 3188 33 43 0 0 chr10 106497769 106497816 -33818949 + AT_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr10 106501576 106501611 -33815154 + GC_rich Low_complexity Low_complexity 1 35 0 265 282 21 69 chr10 106502013 106502201 -33814564 + CT-rich Low_complexity Low_complexity 1 179 0 224 291 17 77 chr10 106502205 106502322 -33814443 + MIR3 SINE MIR 6 115 -93 2473 73 0 3 chr10 106502673 106502973 -33813792 + AluY SINE Alu 1 299 -12 235 323 40 10 chr10 106503031 106503130 -33813635 + L2 LINE L2 2739 2840 -474 239 309 44 0 chr10 106503187 106503257 -33813508 + L2 LINE L2 2989 3061 -211 2232 108 7 0 chr10 106503874 106504155 -33812610 + AluSx SINE Alu 1 286 -26 213 59 29 0 chr10 106504155 106504189 -33812576 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2232 108 7 0 chr10 106504189 106504203 -33812562 + AluSx SINE Alu 286 298 -14 415 291 55 33 chr10 106504761 106504943 -33811822 + MIR3 SINE MIR 21 206 -2 785 253 54 102 chr10 106508523 106508646 -33808119 - MER102b DNA MER1_type -1087 341 214 1847 171 3 13 chr10 106508646 106508961 -33807804 - AluJo SINE Alu 0 312 1 785 253 54 102 chr10 106508961 106509169 -33807596 - MER102b DNA MER1_type -1214 214 26 2321 104 0 0 chr10 106509719 106510016 -33806749 - AluSg SINE Alu -13 297 1 1293 190 0 92 chr10 106510229 106510545 -33806220 - AluJb SINE Alu -21 291 5 682 182 99 0 chr10 106510554 106510675 -33806090 - FLAM_C SINE Alu 0 133 1 1407 351 0 46 chr10 106510701 106511029 -33805736 + AluSq SINE Alu 1 313 0 743 194 30 0 chr10 106512402 106512536 -33804229 - MER58A DNA MER1_type -1 223 86 870 167 0 0 chr10 106512545 106512683 -33804082 - FLAM_C SINE Alu -5 138 1 2261 104 16 0 chr10 106512693 106513000 -33803765 - AluSx SINE Alu 0 312 1 238 246 31 31 chr10 106513003 106513068 -33803697 - MER58A DNA MER1_type -42 65 1 471 312 25 35 chr10 106513198 106513397 -33803368 - MIR SINE MIR -46 216 20 27 0 0 0 chr10 106513603 106513630 -33803135 + AT_rich Low_complexity Low_complexity 1 27 0 1948 157 7 0 chr10 106513633 106513932 -33802833 + AluJb SINE Alu 1 301 -11 7450 111 7 22 chr10 106513948 106514574 -33802191 - L1MA1 LINE L1 0 6302 5668 2154 107 7 3 chr10 106514574 106514864 -33801901 - AluSx SINE Alu -19 293 3 7450 111 7 22 chr10 106514864 106515732 -33801033 - L1MA1 LINE L1 -634 5668 4830 752 212 0 23 chr10 106515753 106515885 -33800880 - FLAM_C SINE Alu -2 131 3 235 274 253 0 chr10 106515886 106515981 -33800784 - L1MC/D LINE L1 -1915 5893 5775 2424 83 0 0 chr10 106516009 106516309 -33800456 + AluY SINE Alu 1 300 -11 4427 179 30 16 chr10 106516309 106517149 -33799616 + L1MB4 LINE L1 5321 6174 -6 1763 174 0 3 chr10 106517167 106517460 -33799305 + AluJb SINE Alu 1 292 -20 281 241 38 0 chr10 106517467 106517546 -33799219 - L1MC4 LINE L1 -43 7999 7918 2876 216 28 14 chr10 106517588 106518221 -33798544 + L1ME1 LINE L1 5514 6155 -11 2291 106 0 3 chr10 106518222 106518523 -33798242 + AluSp SINE Alu 3 302 -11 816 198 80 0 chr10 106518533 106518695 -33798070 + AluJb SINE Alu 138 312 0 2365 94 3 0 chr10 106519036 106519345 -33797420 + AluSq SINE Alu 1 310 -3 253 267 112 75 chr10 106519743 106519904 -33796861 - L2 LINE L2 -1 3312 3146 1938 158 0 6 chr10 106519905 106520216 -33796549 - AluJo SINE Alu -3 309 1 917 92 0 99 chr10 106520253 106520395 -33796370 + AluSq/x SINE Alu 1 128 -185 2236 98 7 0 chr10 106520418 106520714 -33796051 + AluSp SINE Alu 1 298 -15 198 0 0 0 chr10 106520720 106520742 -33796023 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 255 336 25 25 chr10 106520805 106520924 -33795841 - L2 LINE L2 -266 3006 2888 1763 167 7 20 chr10 106520927 106521220 -33795545 + AluJb SINE Alu 6 294 -18 1916 170 0 0 chr10 106521244 106521556 -33795209 - AluSx SINE Alu 0 312 1 716 290 37 43 chr10 106521729 106521883 -33794882 - L1MC/D LINE L1 -504 5658 5505 1944 144 4 0 chr10 106521883 106522160 -33794605 - AluJb SINE Alu -20 292 15 716 290 37 43 chr10 106522160 106522614 -33794151 - L1MC/D LINE L1 -657 5505 5054 866 170 0 15 chr10 106522614 106522749 -33794016 + FLAM_A SINE Alu 1 133 0 716 290 37 43 chr10 106522749 106522825 -33793940 - L1MC/D LINE L1 -1108 5054 4979 2276 112 0 0 chr10 106523407 106523702 -33793063 - AluSx SINE Alu -17 295 1 1909 143 3 3 chr10 106524321 106524607 -33792158 - AluJb SINE Alu -26 286 1 1815 131 31 17 chr10 106524882 106525173 -33791592 - AluSx SINE Alu -17 295 1 1389 137 5 0 chr10 106525202 106525406 -33791359 + AluJo SINE Alu 85 289 -23 1757 142 7 24 chr10 106525682 106525970 -33790795 - AluJo SINE Alu -24 288 6 820 145 0 0 chr10 106526139 106526256 -33790509 - FLAM_C SINE Alu -26 117 1 2236 126 0 19 chr10 106526900 106527218 -33789547 - AluSx SINE Alu 0 312 1 1514 142 0 0 chr10 106527232 106527443 -33789322 - AluSx SINE Alu -63 249 39 1318 125 24 19 chr10 106529267 106529475 -33787290 + L1MB7 LINE L1 5961 6169 -15 1531 171 14 38 chr10 106530693 106530980 -33785785 + AluJo SINE Alu 1 280 -32 273 29 0 0 chr10 106530980 106531014 -33785751 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2505 44 0 7 chr10 106531252 106531546 -33785219 + AluY SINE Alu 1 292 -19 315 257 9 86 chr10 106531677 106531782 -33784983 - L2 LINE L2 -12 3301 3205 2125 111 4 0 chr10 106532520 106532829 -33783936 + AluSx SINE Alu 2 311 0 2407 81 0 0 chr10 106535180 106535477 -33781288 - AluY SINE Alu -14 297 1 2094 82 75 0 chr10 106535477 106535745 -33781020 - AluSg SINE Alu -20 290 3 1179 219 62 136 chr10 106535758 106536158 -33780607 - L1MC4 LINE L1 0 8042 7614 1496 147 48 86 chr10 106536158 106536314 -33780451 - AluJo SINE Alu -11 301 141 203 0 0 36 chr10 106536314 106536342 -33780423 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 2343 73 0 0 chr10 106536349 106536636 -33780129 - AluY SINE Alu -24 287 1 1496 147 48 86 chr10 106536636 106536784 -33779981 - AluJo SINE Alu -177 135 1 1179 219 62 136 chr10 106536784 106537063 -33779702 - L1MC4 LINE L1 -428 7614 7316 1888 159 0 3 chr10 106537063 106537352 -33779413 - AluJb SINE Alu -24 288 1 1179 219 62 136 chr10 106537352 106537412 -33779353 - L1MC4 LINE L1 -726 7316 7253 2181 116 7 0 chr10 106537412 106537705 -33779060 - AluSx SINE Alu -17 295 1 1179 219 62 136 chr10 106537705 106538305 -33778460 - L1MC4 LINE L1 -789 7253 6812 2153 108 37 0 chr10 106538361 106538657 -33778108 + AluSg SINE Alu 1 307 -3 485 265 61 0 chr10 106538660 106538807 -33777958 - MER112 DNA MER1_type -104 156 1 470 302 17 0 chr10 106539344 106539460 -33777305 - L2 LINE L2 -9 3263 3146 2341 97 0 0 chr10 106540000 106540300 -33776465 - AluSx SINE Alu -10 302 3 845 160 153 0 chr10 106540302 106540446 -33776319 - FRAM SINE Alu -13 163 1 2308 86 0 0 chr10 106541244 106541534 -33775231 + AluSx SINE Alu 1 290 -22 2414 74 0 3 chr10 106541534 106541833 -33774932 + AluSg SINE Alu 1 298 -12 1006 221 161 44 chr10 106542181 106542253 -33774512 - L1MC4 LINE L1 0 8042 7980 282 56 0 0 chr10 106542253 106542289 -33774476 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 42 0 0 chr10 106542289 106542313 -33774452 + (TATG)n Simple_repeat Simple_repeat 2 25 0 1006 221 161 44 chr10 106542313 106542332 -33774433 - L1MC4 LINE L1 -62 7980 7965 1714 197 14 0 chr10 106542332 106542622 -33774143 + AluJb SINE Alu 1 294 -18 1006 221 161 44 chr10 106542622 106542680 -33774085 - L1MC4 LINE L1 -77 7965 7915 2209 66 49 3 chr10 106542680 106542966 -33773799 - AluSx SINE Alu -13 299 1 1006 221 161 44 chr10 106542966 106543243 -33773522 - L1MC4 LINE L1 -127 7915 7563 1622 161 0 4 chr10 106543271 106543526 -33773239 + AluJo SINE Alu 10 263 -49 652 266 5 43 chr10 106543563 106543751 -33773014 - AluJo SINE Alu -15 297 117 1187 124 38 24 chr10 106543778 106543987 -33772778 - L1MA4 LINE L1 -2 6298 6087 927 240 117 38 chr10 106544005 106544322 -33772443 - L1MC4 LINE L1 -508 7534 7193 238 275 0 25 chr10 106544862 106544942 -33771823 + CT-rich Low_complexity Low_complexity 2 79 0 1550 148 35 53 chr10 106545134 106545418 -33771347 + AluJo SINE Alu 12 290 -22 207 0 0 0 chr10 106545418 106545441 -33771324 + (GA)n Simple_repeat Simple_repeat 2 24 0 60 27 0 0 chr10 106546806 106546880 -33769885 + AT_rich Low_complexity Low_complexity 1 74 0 1604 128 51 4 chr10 106546924 106547181 -33769584 - L1MC3 LINE L1 -38 7747 7479 2553 57 0 22 chr10 106547202 106547520 -33769245 - AluY SINE Alu 0 311 1 327 225 58 58 chr10 106547523 106547643 -33769122 - MIR SINE MIR -62 200 81 4441 139 27 13 chr10 106549541 106550239 -33766526 - L1MB5 LINE L1 0 6174 5467 180 179 0 0 chr10 106551481 106551520 -33765245 + T-rich Low_complexity Low_complexity 1 39 0 1507 166 146 107 chr10 106552477 106552638 -33764127 - MLT1F LTR MaLR -2 565 412 1027 120 0 0 chr10 106552638 106552771 -33763994 - AluJo SINE Alu -169 133 1 1507 166 146 107 chr10 106552771 106553169 -33763596 - MLT1F LTR MaLR -155 412 8 2908 16 0 0 chr10 106553705 106554023 -33762742 + AluYb8 SINE Alu 1 318 0 2042 146 0 10 chr10 106554094 106554395 -33762370 + AluSx SINE Alu 1 298 -14 883 178 0 0 chr10 106554717 106554846 -33761919 + FLAM_A SINE Alu 1 129 -4 1894 127 20 23 chr10 106555099 106555398 -33761367 + AluJo SINE Alu 1 298 -14 34 0 0 0 chr10 106555756 106555790 -33760975 + AT_rich Low_complexity Low_complexity 1 34 0 1761 142 17 24 chr10 106555790 106556078 -33760687 - AluJb SINE Alu -26 286 1 279 0 0 0 chr10 106556445 106556476 -33760289 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2611 62 0 0 chr10 106557159 106557463 -33759302 - AluY SINE Alu -7 304 1 22 35 0 0 chr10 106557571 106557600 -33759165 + AT_rich Low_complexity Low_complexity 1 29 0 1371 175 21 39 chr10 106557656 106557942 -33758823 - AluJo SINE Alu -31 281 1 21 36 0 0 chr10 106558346 106558374 -33758391 + AT_rich Low_complexity Low_complexity 1 28 0 7047 119 47 30 chr10 106558418 106559043 -33757722 + Tigger3b DNA MER2_type 1 614 -2414 2604 68 0 3 chr10 106559043 106559353 -33757412 - AluY SINE Alu 0 311 3 7047 119 47 30 chr10 106559353 106559649 -33757116 + Tigger3b DNA MER2_type 614 903 -2125 2511 69 16 0 chr10 106559649 106559954 -33756811 - AluY SINE Alu -1 310 1 7047 119 47 30 chr10 106559954 106560237 -33756528 + Tigger3b DNA MER2_type 903 1227 -4 489 198 0 0 chr10 106560301 106560402 -33756363 - HAL1 LINE L1 -110 2397 2297 243 279 0 13 chr10 106560506 106560585 -33756180 - MER102b DNA MER1_type -10 331 254 398 174 45 107 chr10 106560628 106560806 -33755959 + L1MC5 LINE L1 7523 7689 -272 392 251 37 73 chr10 106560813 106561004 -33755761 + L1MC5 LINE L1 7741 7924 -37 285 274 245 0 chr10 106561400 106561506 -33755259 - MIR3 SINE MIR -49 159 28 2371 88 3 0 chr10 106561741 106562036 -33754729 + AluSg1 SINE Alu 1 296 -13 2133 141 7 0 chr10 106562041 106562345 -33754420 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 106562485 106562506 -33754259 + AT_rich Low_complexity Low_complexity 1 21 0 2437 90 0 6 chr10 106563200 106563512 -33753253 - AluSg SINE Alu 0 310 1 505 299 48 6 chr10 106563905 106564072 -33752693 - MIR SINE MIR -43 219 46 413 233 67 93 chr10 106564281 106564431 -33752334 + MIR SINE MIR 2 147 -115 807 216 178 7 chr10 106564434 106564756 -33752009 + L1ME1 LINE L1 5794 6148 -18 2310 83 3 22 chr10 106564780 106565092 -33751673 + AluSp SINE Alu 1 306 -7 188 111 28 0 chr10 106565159 106565195 -33751570 + (TTA)n Simple_repeat Simple_repeat 1 37 0 10656 51 45 5 chr10 106566256 106567555 -33749210 - SVA Other Other 0 1386 36 476 122 19 93 chr10 106567586 106567693 -33749072 + L1MB7 LINE L1 6077 6175 -9 1187 164 42 14 chr10 106567969 106568182 -33748583 + MER20 DNA MER1_type 1 219 0 1120 133 69 10 chr10 106568197 106568255 -33748510 - L1M4 LINE L1 -1093 5053 5000 2412 99 0 0 chr10 106568255 106568557 -33748208 - AluSx SINE Alu -10 302 1 1120 133 69 10 chr10 106568557 106568701 -33748064 - L1M4 LINE L1 -1146 5000 4839 318 262 154 27 chr10 106569111 106569260 -33747505 - MIR SINE MIR -47 215 48 2126 138 6 6 chr10 106569761 106570073 -33746692 + AluSx SINE Alu 1 312 0 825 143 0 15 chr10 106570135 106570294 -33746471 + FLAM_A SINE Alu 1 133 0 369 0 0 0 chr10 106570437 106570478 -33746287 + (TG)n Simple_repeat Simple_repeat 2 42 0 2050 136 13 3 chr10 106570588 106570889 -33745876 + AluSx SINE Alu 1 304 -8 395 125 0 0 chr10 106570908 106570964 -33745801 - AluSp/q SINE Alu -12 291 236 240 263 0 38 chr10 106570915 106570995 -33745770 + Alu SINE Alu 224 300 0 * 329 249 40 107 chr10 106571339 106571516 -33745249 + MIR3 SINE MIR 36 200 -8 2278 108 0 0 chr10 106571677 106571983 -33744782 - AluSq SINE Alu -7 306 1 2238 238 71 55 chr10 106572740 106572768 -33743997 + L1ME3A LINE L1 5285 5311 -859 2281 84 3 16 chr10 106572768 106573077 -33743688 + AluY SINE Alu 1 305 -6 2238 238 71 55 chr10 106573077 106573641 -33743124 + L1ME3A LINE L1 5311 5886 -284 4427 32 0 0 chr10 106573641 106574148 -33742617 + L1PA3 LINE L1 5646 6152 -3 2238 238 71 55 chr10 106574148 106574385 -33742380 + L1ME3A LINE L1 5886 6118 -52 2293 104 3 7 chr10 106577273 106577581 -33739184 + AluSp SINE Alu 2 308 -5 2049 134 3 7 chr10 106579403 106579708 -33737057 - AluJo SINE Alu -7 305 2 1398 114 85 0 chr10 106580494 106580695 -33736070 + MER1B DNA MER1_type 3 220 -77 2196 124 3 48 chr10 106580709 106581064 -33735701 - MER1B DNA MER1_type 0 339 1 2420 92 0 3 chr10 106581347 106581650 -33735115 - AluSx SINE Alu -10 302 1 189 311 40 0 chr10 106582059 106582133 -33734632 + L2 LINE L2 3231 3307 -6 23 0 0 0 chr10 106582192 106582215 -33734550 + AT_rich Low_complexity Low_complexity 1 23 0 739 182 8 0 chr10 106582413 106582534 -33734231 + FLAM_A SINE Alu 1 122 -11 584 248 155 52 chr10 106582561 106582600 -33734165 - L1ME4a LINE L1 -33 6088 6054 2130 122 7 3 chr10 106582600 106582896 -33733869 + AluSp SINE Alu 2 298 -15 584 248 155 52 chr10 106582896 106583148 -33733617 - L1ME4a LINE L1 -67 6054 5829 2165 74 44 4 chr10 106583148 106583464 -33733301 - AluY SINE Alu 0 327 1 1970 134 21 14 chr10 106583466 106583756 -33733009 - AluJb SINE Alu -18 294 3 584 248 155 52 chr10 106583756 106583866 -33732899 - L1ME4a LINE L1 -292 5829 5640 780 210 156 43 chr10 106583874 106584209 -33732556 - HAL1 LINE L1 0 2507 2129 743 133 0 112 chr10 106584209 106584304 -33732461 + AluJo/FLAM SINE Alu 2 77 -225 2433 76 0 10 chr10 106584304 106584607 -33732158 + AluY SINE Alu 1 300 -11 743 133 0 112 chr10 106584607 106584654 -33732111 + AluJo/FLAM SINE Alu 77 128 -174 780 210 156 43 chr10 106584654 106584670 -33732095 - HAL1 LINE L1 -378 2129 2116 1434 259 76 57 chr10 106584708 106584984 -33731781 - HAL1 LINE L1 -480 2027 1758 2315 113 13 0 chr10 106584984 106585293 -33731472 - AluSq SINE Alu 0 313 1 1434 259 76 57 chr10 106585293 106585782 -33730983 - HAL1 LINE L1 -749 1758 1248 2195 111 0 32 chr10 106586048 106586364 -33730401 - AluSx SINE Alu -6 306 1 467 303 15 0 chr10 106586488 106586620 -33730145 + L2 LINE L2 3139 3272 0 431 301 53 48 chr10 106586749 106586835 -33729930 - L1M4 LINE L1 -1356 4790 4706 1942 147 27 13 chr10 106586835 106587134 -33729631 - AluSx SINE Alu -9 303 1 1951 138 0 20 chr10 106587136 106587433 -33729332 - AluJb SINE Alu -21 291 1 431 301 53 48 chr10 106587433 106587755 -33729010 - L1M4 LINE L1 -1440 4706 4377 1375 142 16 123 chr10 106587876 106588186 -33728579 + AluJo SINE Alu 9 285 -27 636 268 197 46 chr10 106588227 106588699 -33728066 - MLT1H1 LTR MaLR -2 553 37 675 119 95 40 chr10 106588848 106588974 -33727791 - FLAM_C SINE Alu 0 133 1 533 248 67 87 chr10 106589755 106589859 -33726906 + MIR SINE MIR 11 116 -146 2356 94 0 3 chr10 106589859 106590156 -33726609 - AluSx SINE Alu -16 296 1 533 248 67 87 chr10 106590156 106590305 -33726460 + MIR SINE MIR 116 259 -3 2427 87 0 6 chr10 106590535 106590846 -33725919 + AluSx SINE Alu 1 309 -3 2333 114 0 0 chr10 106590912 106591218 -33725547 - AluSx SINE Alu -6 306 1 317 298 99 7 chr10 106591229 106591370 -33725395 - MIR3 SINE MIR 0 208 55 1378 191 65 32 chr10 106591789 106592160 -33724605 - L1ME2 LINE L1 0 6164 5782 845 233 98 5 chr10 106592576 106592791 -33723974 + L1ME LINE L1 5537 5771 -393 1664 152 54 34 chr10 106593479 106593775 -33722990 + AluJb SINE Alu 1 302 -10 2514 76 0 0 chr10 106594728 106595031 -33721734 - AluY SINE Alu -8 303 1 413 184 0 0 chr10 106595172 106595248 -33721517 + AluJ/FRAM SINE Alu 229 304 -8 700 251 39 44 chr10 106595260 106595463 -33721302 + MIR SINE MIR 1 202 -60 2361 102 0 7 chr10 106595492 106595797 -33720968 + AluSq SINE Alu 1 303 -10 610 152 9 0 chr10 106596593 106596698 -33720067 + FLAM_C SINE Alu 2 107 -36 1003 157 0 22 chr10 106596764 106596942 -33719823 - AluJb SINE Alu -5 307 134 2422 97 0 0 chr10 106596942 106597250 -33719515 - AluSx SINE Alu -4 308 1 1287 161 28 5 chr10 106597251 106597469 -33719296 + MER2 DNA MER2_type 123 345 0 1958 152 0 3 chr10 106597478 106597774 -33718991 - AluSx SINE Alu -17 295 1 352 207 0 37 chr10 106598201 106598283 -33718482 - MIR SINE MIR -74 134 56 1418 167 171 0 chr10 106598559 106598817 -33717948 - AluJo SINE Alu -10 302 1 2291 94 0 3 chr10 106599657 106599955 -33716810 + AluY SINE Alu 1 297 -14 286 323 19 57 chr10 106600665 106600823 -33715942 + MIR SINE MIR 2 153 -109 2416 101 0 3 chr10 106601110 106601418 -33715347 + AluSc SINE Alu 1 307 -2 345 218 26 0 chr10 106601550 106601628 -33715137 + MIR SINE MIR 183 262 0 22 35 0 0 chr10 106601628 106601657 -33715108 + AT_rich Low_complexity Low_complexity 1 29 0 322 230 60 30 chr10 106601657 106601757 -33715008 - MIR SINE MIR -109 153 51 260 286 107 0 chr10 106601789 106601873 -33714892 + MIR SINE MIR 48 140 -68 592 186 171 46 chr10 106601996 106602187 -33714578 + MER5C DNA MER1_type 28 262 -62 2269 76 28 0 chr10 106602187 106602477 -33714288 + AluY SINE Alu 1 298 -13 592 186 171 46 chr10 106602477 106602548 -33714217 + MER5C DNA MER1_type 262 323 -1 2152 111 0 17 chr10 106602660 106602972 -33713793 + AluSx SINE Alu 1 307 0 2217 125 0 10 chr10 106603322 106603634 -33713131 - AluSx SINE Alu -3 309 1 1216 86 7 0 chr10 106603755 106603907 -33712858 + AluSp SINE Alu 1 153 -160 271 158 35 0 chr10 106603915 106603972 -33712793 + L1MD2 LINE L1 4468 4526 -1620 22 0 0 0 chr10 106604269 106604291 -33712474 + AT_rich Low_complexity Low_complexity 1 22 0 1654 148 7 50 chr10 106604372 106604534 -33712231 - AluJb SINE Alu -18 294 127 2134 120 0 26 chr10 106604534 106604842 -33711923 - AluSx SINE Alu -12 300 1 912 174 10 82 chr10 106604750 106604848 -33711917 - AluJo SINE Alu -92 220 143 2646 46 0 3 chr10 106604848 106605153 -33711612 - AluY SINE Alu -7 304 1 1654 148 7 50 chr10 106605153 106605261 -33711504 - AluJb SINE Alu -190 122 29 912 174 10 82 chr10 106605153 106605261 -33711504 - AluJo SINE Alu -169 143 29 2558 217 59 18 chr10 106605274 106606310 -33710455 + L1MD2 LINE L1 4845 5928 -431 2485 84 0 3 chr10 106606606 106606917 -33709848 - AluY SINE Alu -1 310 1 372 59 0 0 chr10 106606960 106607011 -33709754 + (CA)n Simple_repeat Simple_repeat 1 51 0 457 286 50 21 chr10 106607523 106607663 -33709102 + MIR SINE MIR 26 169 -93 238 131 0 66 chr10 106608034 106608095 -33708670 - L1MB4 LINE L1 -2 6181 6124 * 454 182 20 68 chr10 106608088 106608116 -33708649 + L1MC5 LINE L1 7654 7682 -279 1696 140 77 7 chr10 106608116 106608402 -33708363 + AluJb SINE Alu 1 306 -6 454 182 20 68 chr10 106608402 106608521 -33708244 + L1MC5 LINE L1 7682 7794 -167 252 0 0 0 chr10 106609046 106609074 -33707691 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2402 74 0 0 chr10 106609076 106609360 -33707405 - AluY SINE Alu -27 284 1 2333 95 0 0 chr10 106609582 106609886 -33706879 + AluSg SINE Alu 1 304 -6 2427 89 13 0 chr10 106609951 106610253 -33706512 + AluSg SINE Alu 1 306 -4 747 186 33 57 chr10 106610306 106610516 -33706249 - L1MB4 LINE L1 0 6180 5976 562 139 50 0 chr10 106610630 106610731 -33706034 - AluSg SINE Alu -203 107 2 487 257 91 71 chr10 106610736 106610961 -33705804 - L1ME LINE L1 -451 5670 5451 2052 148 7 0 chr10 106610961 106611258 -33705507 - AluJb SINE Alu -13 299 1 487 257 91 71 chr10 106611258 106611483 -33705282 - L1ME LINE L1 -670 5451 5176 2155 129 10 7 chr10 106612378 106612688 -33704077 - AluSx SINE Alu -1 311 1 2044 143 3 10 chr10 106613319 106613627 -33703138 + AluJb SINE Alu 1 306 -6 2210 117 3 22 chr10 106613702 106614019 -33702746 + AluSx SINE Alu 1 311 -1 2251 88 10 3 chr10 106614520 106614817 -33701948 + AluSp SINE Alu 1 299 -14 553 271 8 8 chr10 106615063 106615192 -33701573 + MER5A DNA MER1_type 2 130 -59 2372 99 0 10 chr10 106615253 106615556 -33701209 + AluSx SINE Alu 1 300 -12 606 211 9 18 chr10 106617316 106617430 -33699335 - MER81 DNA DNA 0 114 2 2562 59 0 7 chr10 106620935 106621238 -33695527 + AluY SINE Alu 1 301 -10 2363 107 0 0 chr10 106621656 106621955 -33694810 + AluSx SINE Alu 1 299 -13 1589 188 51 17 chr10 106624224 106624517 -33692248 - AluJo SINE Alu -9 303 1 2278 104 3 0 chr10 106625147 106625444 -33691321 + AluSg SINE Alu 1 298 -12 2776 45 0 0 chr10 106626497 106626807 -33689958 - AluY SINE Alu -1 310 1 2400 100 0 0 chr10 106628665 106628975 -33687790 - AluY SINE Alu -1 310 1 2465 93 0 0 chr10 106629018 106629318 -33687447 + AluSx SINE Alu 1 300 -12 1875 130 0 0 chr10 106630080 106630326 -33686439 + AluJb SINE Alu 1 246 -66 245 224 52 0 chr10 106630357 106630415 -33686350 + AluJb SINE Alu 234 294 -8 2333 103 3 0 chr10 106631036 106631337 -33685428 - AluSx SINE Alu -10 302 1 2627 214 47 57 chr10 106635637 106636098 -33680667 + L1MD2 LINE L1 4255 4719 -1427 2266 108 10 0 chr10 106636098 106636395 -33680370 + AluSx SINE Alu 1 300 -12 2627 214 47 57 chr10 106636395 106636421 -33680344 + L1MD2 LINE L1 4719 4744 -1402 2015 79 20 0 chr10 106636421 106636675 -33680090 + AluSg SINE Alu 35 293 -17 2627 214 47 57 chr10 106636675 106636686 -33680079 + L1MD2 LINE L1 4744 4754 -1392 2153 106 28 0 chr10 106636686 106636969 -33679796 + AluSp SINE Alu 1 291 -22 2627 214 47 57 chr10 106636969 106637317 -33679448 + L1MD2 LINE L1 4754 5095 -1051 3578 169 71 29 chr10 106637400 106637757 -33679008 + L1MD2 LINE L1 5079 5419 -940 1847 126 41 4 chr10 106637757 106638028 -33678737 + AluSx SINE Alu 14 294 -18 3578 169 71 29 chr10 106638028 106638519 -33678246 + L1MD2 LINE L1 5419 5971 -388 2321 102 7 0 chr10 106638519 106638813 -33677952 + AluSx SINE Alu 1 296 -16 3578 169 71 29 chr10 106638813 106638883 -33677882 + L1MD2 LINE L1 5971 6037 -322 1184 133 6 0 chr10 106638883 106639049 -33677716 + FRAM SINE Alu 1 160 -16 1198 179 103 3 chr10 106639049 106639340 -33677425 + L1MD2 LINE L1 6035 6354 -5 2001 137 0 52 chr10 106639340 106639668 -33677097 + AluJo SINE Alu 1 311 -1 2266 78 7 7 chr10 106641770 106642104 -33674661 - AluSc SINE Alu 0 334 1 302 264 189 31 chr10 106642109 106642268 -33674497 - L1MC4a LINE L1 -1638 6170 5987 427 190 109 43 chr10 106642300 106642389 -33674376 + MER113 DNA MER1_type? 124 206 -315 2508 78 3 0 chr10 106642389 106642698 -33674067 + AluY SINE Alu 1 310 -1 427 190 109 43 chr10 106642698 106642792 -33673973 + MER113 DNA MER1_type? 206 319 -202 1791 136 13 50 chr10 106642792 106643109 -33673656 + AluJo SINE Alu 1 305 -7 1719 162 39 7 chr10 106643112 106643396 -33673369 + AluJo SINE Alu 1 293 -19 333 250 67 0 chr10 106643410 106643514 -33673251 + MER113 DNA MER1_type? 359 469 -52 1964 133 47 0 chr10 106645179 106645457 -33671308 + AluSx SINE Alu 3 293 -19 2272 120 7 7 chr10 106645992 106646301 -33670464 + AluSx SINE Alu 1 309 -3 423 91 0 0 chr10 106647759 106647814 -33668951 + FRAM SINE Alu 66 120 -56 1834 148 4 11 chr10 106647817 106648087 -33668678 - AluJo SINE Alu -44 268 1 3738 157 51 92 chr10 106648322 106648976 -33667789 + MER21B LTR ERV1 1 610 -253 848 118 7 22 chr10 106648976 106649111 -33667654 + FLAM_C SINE Alu 1 133 0 3738 157 51 92 chr10 106649111 106649355 -33667410 + MER21B LTR ERV1 610 862 -1 996 100 18 3 chr10 106650089 106650315 -33666450 + AluJb SINE Alu 5 299 -13 898 113 0 50 chr10 106650406 106650547 -33666218 + AluJo SINE Alu 1 134 -178 2123 130 0 55 chr10 106650921 106651104 -33665661 - AluSx SINE Alu 0 312 121 186 43 0 0 chr10 106651104 106651127 -33665638 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2253 97 0 0 chr10 106651129 106651407 -33665358 - AluSg SINE Alu -31 279 2 2123 130 0 55 chr10 106651407 106651550 -33665215 - AluSx SINE Alu -192 120 1 838 139 8 0 chr10 106651551 106651673 -33665092 - AluJb SINE Alu -13 299 177 221 255 255 19 chr10 106651691 106651797 -33664968 - MIR SINE MIR -112 150 20 1983 136 0 14 chr10 106651836 106651971 -33664794 + AluSx SINE Alu 1 136 -176 2248 83 3 33 chr10 106651971 106652273 -33664492 + AluSc SINE Alu 1 293 -16 1983 136 0 14 chr10 106652273 106652424 -33664341 + AluSx SINE Alu 136 283 -29 459 0 0 0 chr10 106652427 106652478 -33664287 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1172 71 13 13 chr10 106652876 106653020 -33663745 + AluSg/x SINE Alu 156 302 -10 2376 93 0 6 chr10 106653020 106653332 -33663433 + AluSg SINE Alu 1 310 0 685 240 188 17 chr10 106653352 106653644 -33663121 + L2 LINE L2 2356 2697 -617 1833 156 7 3 chr10 106653644 106653926 -33662839 - AluJb SINE Alu -16 296 14 313 111 0 0 chr10 106653947 106654007 -33662758 + FLAM_A SINE Alu 84 133 0 1916 172 3 3 chr10 106654025 106654327 -33662438 + AluJo SINE Alu 1 302 -10 872 245 102 5 chr10 106654345 106654682 -33662083 + L2 LINE L2 2722 3170 -143 193 213 53 80 chr10 106654750 106654825 -33661940 - L2 LINE L2 -12 3260 3188 2261 107 3 0 chr10 106654854 106655168 -33661597 - AluSq SINE Alu 0 315 1 281 269 0 0 chr10 106655252 106655319 -33661446 + L1MC5 LINE L1 7826 7892 -69 1416 167 44 16 chr10 106655320 106655571 -33661194 - AluJo SINE Alu -20 292 35 250 333 44 0 chr10 106655733 106655823 -33660942 + L3 LINE CR1 283 376 -1201 32 0 0 0 chr10 106655827 106655859 -33660906 + AT_rich Low_complexity Low_complexity 1 32 0 968 106 0 21 chr10 106655878 106655896 -33660869 - AluJb SINE Alu -173 139 122 8148 41 18 0 chr10 106655896 106656848 -33659917 + LTR5 LTR ERVK 1 969 0 968 106 0 21 chr10 106656848 106656971 -33659794 - AluJb SINE Alu -190 122 1 214 340 57 0 chr10 106656971 106657077 -33659688 + L3 LINE CR1 367 478 -1099 560 213 108 0 chr10 106657125 106657280 -33659485 + MIR SINE MIR 13 182 -67 207 314 15 129 chr10 106657502 106657680 -33659085 + L3 LINE CR1 1332 1529 -48 1504 169 25 25 chr10 106657680 106657986 -33658779 + AluJo SINE Alu 10 315 0 1759 126 0 4 chr10 106657986 106658247 -33658518 + AluSq SINE Alu 1 260 -53 207 314 15 129 chr10 106658247 106658329 -33658436 + L3 LINE CR1 1527 1565 -12 190 214 369 0 chr10 106661650 106661734 -33655031 - L2 LINE L2 -227 3045 2931 343 286 34 43 chr10 106662172 106662360 -33654405 + MIR3 SINE MIR 2 186 -76 2277 80 3 7 chr10 106663383 106663685 -33653080 + AluSq SINE Alu 1 301 -12 334 307 61 55 chr10 106664235 106664398 -33652367 + MIR SINE MIR 27 190 -72 314 254 55 4 chr10 106668144 106668231 -33648534 - MIR SINE MIR -62 146 64 448 304 24 77 chr10 106668461 106668518 -33648247 - MER91A DNA MER1_type 0 196 138 2487 57 0 0 chr10 106668518 106668819 -33647946 + AluY SINE Alu 1 301 -10 448 304 24 77 chr10 106668819 106668968 -33647797 - MER91A DNA MER1_type -58 138 1 2375 75 7 0 chr10 106670949 106671256 -33645509 - AluYa5 SINE Alu -2 309 1 219 330 125 0 chr10 106671827 106671915 -33644850 + MIR SINE MIR 2 100 -162 202 184 0 61 chr10 106671960 106672009 -33644756 + L2 LINE L2 3216 3261 -11 247 169 110 29 chr10 106673545 106673681 -33643084 + (CCCGG)n Simple_repeat Simple_repeat 3 149 0 21 0 0 0 chr10 106673698 106673719 -33643046 + GC_rich Low_complexity Low_complexity 1 21 0 274 267 70 12 chr10 106674769 106674855 -33641910 + MIR SINE MIR 32 122 -86 333 250 125 0 chr10 106677140 106677260 -33639505 - L3b LINE CR1 -106 1477 1343 185 268 146 24 chr10 106679766 106679848 -33636917 - L3b LINE CR1 -188 1395 1304 1372 191 43 0 chr10 106679905 106680184 -33636581 - AluJo SINE Alu 0 312 30 182 328 31 31 chr10 106680296 106680360 -33636405 - MIR3 SINE MIR -54 154 91 230 272 32 40 chr10 106680599 106680724 -33636041 + (CAGAGA)n Simple_repeat Simple_repeat 1 124 0 2237 117 0 0 chr10 106682153 106682460 -33634305 - AluSq SINE Alu -6 307 1 420 55 0 0 chr10 106682500 106682555 -33634210 + (CA)n Simple_repeat Simple_repeat 2 56 0 228 35 0 0 chr10 106682610 106682639 -33634126 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 307 0 11 chr10 106682810 106682898 -33633867 + (CA)n Simple_repeat Simple_repeat 1 87 0 190 186 23 23 chr10 106683786 106683829 -33632936 + L3b LINE CR1 1342 1384 -199 21 71 0 0 chr10 106684085 106684127 -33632638 + GC_rich Low_complexity Low_complexity 1 42 0 360 284 102 51 chr10 106684405 106684581 -33632184 + MIR SINE MIR 28 212 -50 241 204 0 0 chr10 106685100 106685149 -33631616 - L2 LINE L2 0 3313 3265 350 240 77 0 chr10 106686916 106687020 -33629745 + Charlie8 DNA MER1_type 71 182 -2235 189 0 0 0 chr10 106688222 106688243 -33628522 + (CAGCC)n Simple_repeat Simple_repeat 3 23 0 233 254 0 0 chr10 106689873 106689928 -33626837 + C-rich Low_complexity Low_complexity 1 55 0 810 262 131 48 chr10 106690281 106690678 -33626087 + L2 LINE L2 2874 3303 -10 363 315 73 64 chr10 106690690 106691004 -33625761 + L2 LINE L2 2213 2529 -785 1489 147 6 99 chr10 106691081 106691414 -33625351 - AluJb SINE Alu -10 302 1 319 193 12 72 chr10 106691467 106691550 -33625215 + MER116 DNA Mariner 1 78 -2 1226 319 114 16 chr10 106691578 106692375 -33624390 + L2 LINE L2 2014 2888 -426 194 0 39 0 chr10 106692375 106692401 -33624364 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2105 98 17 0 chr10 106692403 106692690 -33624075 - AluSx SINE Alu -20 292 1 244 167 67 33 chr10 106692898 106692958 -33623807 - L2 LINE L2 -10 3303 3242 851 137 0 0 chr10 106693053 106693170 -33623595 + FLAM_C SINE Alu 1 117 -16 22 25 0 25 chr10 106693180 106693193 -33623572 + AT_rich Low_complexity Low_complexity 1 13 -26 2306 94 3 0 chr10 106693193 106693500 -33623265 + AluY SINE Alu 1 308 -3 22 25 0 25 chr10 106693500 106693526 -33623239 + AT_rich Low_complexity Low_complexity 13 39 0 313 306 38 51 chr10 106693728 106693885 -33622880 - MIR SINE MIR -85 177 23 2051 72 76 4 chr10 106694265 106694541 -33622224 - AluSq SINE Alu -7 306 11 2396 67 3 16 chr10 106694578 106694920 -33621845 - AluSp SINE Alu 0 313 1 969 198 49 76 chr10 106695458 106695579 -33621186 - MIR SINE MIR -2 260 137 2272 95 0 13 chr10 106695579 106695895 -33620870 - AluSx SINE Alu 0 312 1 969 198 49 76 chr10 106695895 106696036 -33620729 - MIR SINE MIR -125 137 5 332 93 0 19 chr10 106697306 106697360 -33619405 + (TC)n Simple_repeat Simple_repeat 1 53 0 2458 64 0 3 chr10 106697361 106697676 -33619089 - AluSg SINE Alu 0 314 1 1007 167 38 75 chr10 106697723 106697963 -33618802 - AluJb SINE Alu -1 311 81 238 278 178 0 chr10 106698403 106698493 -33618272 - L2 LINE L2 -25 3247 3142 2030 138 0 26 chr10 106698544 106698856 -33617909 + AluJb SINE Alu 9 312 0 188 103 51 0 chr10 106700150 106700189 -33616576 + G-rich Low_complexity Low_complexity 3 43 0 1208 128 0 6 chr10 106701424 106701603 -33615162 - AluSg/x SINE Alu -1 309 132 2292 101 3 0 chr10 106701603 106701910 -33614855 - AluSx SINE Alu -4 308 1 246 273 0 0 chr10 106701999 106702054 -33614711 + L2 LINE L2 3251 3305 -8 1089 155 0 32 chr10 106702115 106702302 -33614463 + AluJb SINE Alu 132 312 0 389 205 19 142 chr10 106702361 106702566 -33614199 + MIR SINE MIR 83 262 0 341 298 118 25 chr10 106702761 106702922 -33613843 + MIR3 SINE MIR 33 208 0 2398 55 0 26 chr10 106703229 106703539 -33613226 + AluY SINE Alu 1 302 -9 2004 131 3 19 chr10 106703704 106704018 -33612747 + AluSx SINE Alu 1 309 -3 2406 58 3 13 chr10 106704021 106704334 -33612431 + AluY SINE Alu 1 310 -1 2448 60 0 0 chr10 106704348 106704648 -33612117 + AluY SINE Alu 1 300 -11 905 187 6 0 chr10 106704648 106704819 -33611946 + AluJo/FRAM SINE Alu 137 308 -4 2375 73 0 3 chr10 106704887 106705189 -33611576 + AluSc SINE Alu 1 301 -8 1837 142 0 30 chr10 106705197 106705499 -33611266 + AluJb SINE Alu 7 299 -13 421 198 153 9 chr10 106705518 106705629 -33611136 + AluJo/FLAM SINE Alu 7 133 -179 2425 71 10 0 chr10 106705632 106705940 -33610825 + AluY SINE Alu 1 311 0 1005 189 101 44 chr10 106705980 106706141 -33610624 - L1MC4 LINE L1 -298 7744 7594 1793 172 0 0 chr10 106706141 106706432 -33610333 - AluJb SINE Alu -21 291 1 1005 189 101 44 chr10 106706432 106706613 -33610152 - L1MC4 LINE L1 -448 7594 7425 2672 154 28 51 chr10 106706613 106706775 -33609990 - LTR42 LTR ERVL 0 495 331 1657 162 3 45 chr10 106706775 106707084 -33609681 - AluJo SINE Alu -16 296 1 2672 154 28 51 chr10 106707084 106707428 -33609337 - LTR42 LTR ERVL -164 331 1 1005 189 101 44 chr10 106707428 106707669 -33609096 - L1MC4 LINE L1 -617 7425 7199 2319 82 3 9 chr10 106707669 106707984 -33608781 - AluSq SINE Alu 0 313 1 2263 73 3 29 chr10 106707984 106708299 -33608466 - AluSp SINE Alu 0 313 7 1005 189 101 44 chr10 106708299 106708499 -33608266 - L1MC4 LINE L1 -843 7199 7012 2473 58 0 0 chr10 106708499 106708808 -33607957 - AluY SINE Alu -2 309 1 1005 189 101 44 chr10 106708808 106708961 -33607804 - L1MC4 LINE L1 -1030 7012 6774 2012 73 25 11 chr10 106708965 106709239 -33607526 + AluSg SINE Alu 1 278 -32 234 0 0 0 chr10 106709244 106709270 -33607495 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 325 308 93 28 chr10 106709415 106709475 -33607290 + L2 LINE L2 2554 2609 -705 2262 131 39 0 chr10 106709475 106709810 -33606955 - MER7A DNA MER2_type 0 346 1 325 308 93 28 chr10 106709810 106709954 -33606811 + L2 LINE L2 2609 2779 -535 2134 89 0 38 chr10 106709954 106710268 -33606497 + AluSg SINE Alu 1 302 -8 325 308 93 28 chr10 106710268 106710309 -33606456 + L2 LINE L2 2779 2816 -498 544 224 66 66 chr10 106710483 106710666 -33606099 + L2 LINE L2 3130 3312 -1 381 261 76 34 chr10 106710679 106710798 -33605967 + L2 LINE L2 2926 3049 -264 1904 151 0 0 chr10 106710849 106711176 -33605589 + AluSx SINE Alu 1 327 0 1835 111 36 18 chr10 106711183 106711462 -33605303 + AluSq SINE Alu 3 286 -27 350 240 23 61 chr10 106711462 106711632 -33605133 - L1MC4 LINE L1 -1339 6983 1903 1977 112 0 21 chr10 106711662 106711798 -33604967 + AluSg SINE Alu 1 138 -168 2050 100 28 7 chr10 106711798 106712089 -33604676 + AluSg1 SINE Alu 1 297 -12 1977 112 0 21 chr10 106712089 106712264 -33604501 + AluSg SINE Alu 138 306 0 488 229 62 84 chr10 106712264 106712443 -33604322 - MIR SINE MIR -8 254 80 1983 128 6 19 chr10 106712565 106712878 -33603887 + AluSx SINE Alu 1 309 -3 2517 43 0 0 chr10 106713289 106713593 -33603172 - AluY SINE Alu -6 305 2 279 245 165 2 chr10 106713648 106713761 -33603004 - MIR SINE MIR -62 146 44 1755 131 12 38 chr10 106714093 106714413 -33602352 - AluJb SINE Alu 0 312 1 260 324 49 0 chr10 106716306 106716408 -33600357 - MIR SINE MIR -138 124 18 471 310 21 27 chr10 106716483 106716495 -33600270 - MIR SINE MIR -49 213 202 2044 113 7 3 chr10 106716495 106716795 -33599970 - AluSx SINE Alu -11 301 1 471 310 21 27 chr10 106716795 106716806 -33599959 - MIR SINE MIR -60 202 192 2140 126 0 3 chr10 106716806 106717116 -33599649 - AluSg SINE Alu -1 309 1 471 310 21 27 chr10 106717116 106717278 -33599487 - MIR SINE MIR -70 192 28 1656 164 0 11 chr10 106717882 106718162 -33598603 + AluJb SINE Alu 11 287 -25 2136 95 3 7 chr10 106718326 106718622 -33598143 - AluSp SINE Alu -18 295 1 1772 139 46 26 chr10 106718766 106718826 -33597939 - AluJb SINE Alu -4 308 251 7186 87 10 2 chr10 106718826 106719787 -33596978 - LTR5 LTR ERVK 0 969 1 1772 139 46 26 chr10 106719787 106720028 -33596737 - AluJb SINE Alu -61 251 1 530 130 65 0 chr10 106720061 106720153 -33596612 + L1MA1 LINE L1 6178 6275 -27 2073 193 50 45 chr10 106720308 106720791 -33595974 + MLT1D LTR MaLR 21 505 0 440 322 78 12 chr10 106721014 106721259 -33595506 + MLT1K LTR MaLR 3 263 -325 1273 145 86 86 chr10 106721465 106721608 -33595157 - AluJo SINE Alu -22 290 148 2022 101 24 7 chr10 106721608 106721906 -33594859 - AluSc SINE Alu -6 303 1 1273 145 86 86 chr10 106721906 106722052 -33594713 - AluJo SINE Alu -163 149 1 2153 95 3 13 chr10 106722605 106722910 -33593855 - AluSx SINE Alu -10 302 1 2097 123 3 0 chr10 106723435 106723743 -33593022 - AluSc SINE Alu 0 309 1 1662 184 0 13 chr10 106724486 106724791 -33591974 + AluJb SINE Alu 1 301 -11 505 294 77 43 chr10 106725034 106725269 -33591496 + MIR SINE MIR 20 262 0 630 169 37 7 chr10 106726256 106726392 -33590373 - MER5B DNA MER1_type -33 145 6 182 279 0 0 chr10 106727260 106727303 -33589462 + MIR SINE MIR 210 252 -10 2224 57 13 10 chr10 106727621 106727920 -33588845 - AluY SINE Alu -9 302 3 362 293 24 1 chr10 106728113 106728229 -33588536 + MIR SINE MIR 38 157 -65 547 208 0 0 chr10 106728497 106728593 -33588172 - AluJ/FLAM SINE Alu -212 100 5 2049 112 3 0 chr10 106728628 106728915 -33587850 + AluSx SINE Alu 8 295 -17 2381 97 0 0 chr10 106728961 106729271 -33587494 + AluSg SINE Alu 1 310 0 2046 123 0 13 chr10 106729288 106729424 -33587341 + AluSx SINE Alu 1 137 -175 2141 92 0 20 chr10 106729424 106729727 -33587038 + AluSg SINE Alu 1 297 -13 2046 123 0 13 chr10 106729727 106729890 -33586875 + AluSx SINE Alu 137 296 -16 390 276 103 13 chr10 106729901 106730057 -33586708 - MIR SINE MIR -16 246 77 601 274 52 28 chr10 106730547 106730653 -33586112 - MIR SINE MIR 0 262 160 2255 104 3 0 chr10 106730653 106730960 -33585805 + AluSx SINE Alu 1 308 -4 601 274 52 28 chr10 106730960 106731065 -33585700 - MIR SINE MIR -102 160 46 2025 125 7 0 chr10 106731484 106731787 -33584978 - AluSx SINE Alu -7 305 1 556 222 24 30 chr10 106731815 106731982 -33584783 + L1MA10 LINE L1 6169 6334 0 2118 89 10 10 chr10 106732106 106732408 -33584357 - AluSq SINE Alu -11 302 1 1153 71 65 22 chr10 106732408 106732592 -33584173 - LTR1 LTR ERV1 -593 192 1 242 326 76 30 chr10 106732658 106732790 -33583975 - MIR SINE MIR -49 213 76 2061 71 19 0 chr10 106732868 106733134 -33583631 + AluY SINE Alu 27 297 -14 203 108 0 54 chr10 106733455 106733492 -33583273 + (CTGGGG)n Simple_repeat Simple_repeat 2 36 0 2116 92 31 3 chr10 106733996 106734290 -33582475 - AluSq SINE Alu -11 302 1 1937 127 23 20 chr10 106735929 106736229 -33580536 + AluSx SINE Alu 1 301 -11 384 313 21 21 chr10 106736284 106736428 -33580337 + MIR3 SINE MIR 24 167 -41 998 182 0 0 chr10 106736468 106736627 -33580138 + FRAM SINE Alu 1 159 -7 1769 148 30 30 chr10 106736719 106737023 -33579742 - AluSx SINE Alu -8 304 1 934 110 0 0 chr10 106737450 106737577 -33579188 - AluY SINE Alu -184 127 1 614 293 58 0 chr10 106737748 106737939 -33578826 + MIR SINE MIR 46 247 -15 195 42 0 0 chr10 106738632 106738656 -33578109 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 686 287 186 31 chr10 106738656 106739043 -33577722 - L2 LINE L2 -13 3300 2854 1897 127 10 3 chr10 106739086 106739399 -33577366 - AluJb SINE Alu 0 312 1 712 256 119 56 chr10 106739401 106739461 -33577304 - L2 LINE L2 -569 2745 2690 2023 103 0 23 chr10 106739461 106739762 -33577003 + AluSx SINE Alu 1 294 -18 712 256 119 56 chr10 106739762 106740096 -33576669 - L2 LINE L2 -624 2690 2326 1756 105 48 54 chr10 106740505 106740819 -33575946 - AluSx SINE Alu 0 312 1 1045 88 0 7 chr10 106740819 106740956 -33575809 - AluSq/x SINE Alu -176 136 1 2102 88 24 17 chr10 106741604 106741898 -33574867 + AluSx SINE Alu 1 296 -16 688 245 75 0 chr10 106742055 106742214 -33574551 - MER5B DNA MER1_type -4 174 4 506 222 250 34 chr10 106742230 106742406 -33574359 - MER20 DNA MER1_type -5 214 1 409 331 33 16 chr10 106742433 106742504 -33574261 + MIR SINE MIR 9 77 -185 2060 125 3 19 chr10 106742504 106742815 -33573950 + AluSx SINE Alu 2 307 -5 409 331 33 16 chr10 106742815 106742927 -33573838 + MIR SINE MIR 77 195 -67 2081 89 33 20 chr10 106743043 106743345 -33573420 - AluSg SINE Alu -4 306 1 186 43 0 0 chr10 106744913 106744936 -33571829 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 215 236 0 18 chr10 106745172 106745227 -33571538 + (CA)n Simple_repeat Simple_repeat 1 54 0 1644 91 36 0 chr10 106747134 106747354 -33569411 + MER30 DNA MER1_type 3 230 0 23 0 0 0 chr10 106747982 106748005 -33568760 + AT_rich Low_complexity Low_complexity 1 23 0 1911 113 3 21 chr10 106748013 106748327 -33568438 + AluSx SINE Alu 5 313 0 728 221 7 0 chr10 106749381 106749530 -33567235 - Charlie8 DNA MER1_type -2172 245 96 185 321 48 24 chr10 106749647 106749731 -33567034 + L2 LINE L2 3207 3292 -21 2046 150 0 21 chr10 106750510 106750836 -33565929 + MER1B DNA MER1_type 21 339 0 2304 69 3 13 chr10 106750859 106751165 -33565600 + AluSp SINE Alu 1 303 -10 1502 168 46 33 chr10 106751229 106751533 -33565232 - AluJb SINE Alu -4 308 1 1691 147 8 0 chr10 106751595 106751861 -33564904 + AluSq SINE Alu 11 278 -35 490 135 297 9 chr10 106751872 106751983 -33564782 + AluJo SINE Alu 125 267 -45 423 256 40 85 chr10 106751984 106752078 -33564687 + MIR SINE MIR 17 99 -163 2537 46 0 0 chr10 106752078 106752382 -33564383 - AluY SINE Alu -7 304 1 423 256 40 85 chr10 106752382 106752486 -33564279 + MIR SINE MIR 99 206 -56 364 245 37 10 chr10 106753643 106753785 -33562980 + L1ME4a LINE L1 1205 6108 -8 26 50 0 0 chr10 106753792 106753832 -33562933 + AT_rich Low_complexity Low_complexity 1 40 0 2171 118 0 0 chr10 106753983 106754280 -33562485 + AluSx SINE Alu 1 297 -15 2129 78 11 3 chr10 106754427 106754709 -33562056 + AluY SINE Alu 23 306 -5 1995 132 20 0 chr10 106755162 106755458 -33561307 + AluSx SINE Alu 1 302 -10 226 228 0 0 chr10 106755584 106755641 -33561124 + L1ME4a LINE L1 6060 6116 -5 2222 77 0 17 chr10 106756221 106756521 -33560244 - AluY SINE Alu -16 295 1 2320 94 0 0 chr10 106756521 106756820 -33559945 - AluSg SINE Alu -11 299 1 2157 110 10 10 chr10 106757171 106757479 -33559286 + AluSx SINE Alu 1 308 -4 1689 130 3 84 chr10 106758664 106758802 -33557963 + AluSx SINE Alu 1 149 -153 1580 185 14 21 chr10 106758802 106759088 -33557677 + AluJb SINE Alu 1 284 -28 204 67 0 0 chr10 106759088 106759118 -33557647 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 1510 157 60 53 chr10 106759125 106759256 -33557509 + AluJb SINE Alu 1 130 -182 2093 137 3 0 chr10 106759256 106759562 -33557203 - AluSx SINE Alu -5 307 1 1510 157 60 53 chr10 106759562 106759729 -33557036 + AluJb SINE Alu 130 301 -11 2321 92 0 0 chr10 106759739 106760032 -33556733 + AluY SINE Alu 1 293 -18 1689 130 3 84 chr10 106760032 106760181 -33556584 + AluSx SINE Alu 163 283 -19 189 0 0 0 chr10 106760181 106760202 -33556563 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1423 57 0 6 chr10 106760207 106760382 -33556383 - AluY SINE Alu -7 304 131 1973 72 0 12 chr10 106760382 106760633 -33556132 - AluY SINE Alu 0 311 64 356 228 0 0 chr10 106760646 106760725 -33556040 + Charlie8 DNA MER1_type 149 227 -2190 292 191 52 52 chr10 106761203 106761339 -33555426 + L1MC5 LINE L1 7563 7698 -263 2186 107 33 0 chr10 106761348 106761648 -33555117 + AluSx SINE Alu 1 310 -2 421 231 75 8 chr10 106761652 106761786 -33554979 + L1MC5 LINE L1 7783 7925 -36 953 168 0 45 chr10 106761893 106762072 -33554693 + FRAM SINE Alu 5 175 -1 327 195 115 23 chr10 106762104 106762191 -33554574 - FLAM_A SINE Alu -4 129 35 1758 181 7 0 chr10 106762263 106762556 -33554209 + AluJo SINE Alu 2 296 -16 1372 151 82 33 chr10 106762979 106763224 -33553541 - AluJo SINE Alu -55 257 1 1965 123 7 25 chr10 106764603 106764739 -33552026 + AluSx SINE Alu 1 138 -174 2499 25 7 0 chr10 106764739 106765059 -33551706 + AluY SINE Alu 1 322 0 1965 123 7 25 chr10 106765059 106765205 -33551560 + AluSx SINE Alu 138 279 -33 2198 119 7 0 chr10 106765243 106765546 -33551219 + AluJb SINE Alu 2 306 -6 199 345 175 11 chr10 106765647 106765824 -33550941 + MIR SINE MIR 8 213 -49 377 224 48 91 chr10 106766115 106766280 -33550485 + MIR SINE MIR 80 237 -25 28 71 0 0 chr10 106768623 106768679 -33548086 + GC_rich Low_complexity Low_complexity 1 56 0 667 147 37 59 chr10 106770371 106770507 -33546258 + FLAM_C SINE Alu 1 133 0 2319 108 0 0 chr10 106770834 106771130 -33545635 - AluSx SINE Alu -16 296 1 2224 112 0 26 chr10 106772413 106772725 -33544040 - AluSx SINE Alu -8 304 1 220 225 11 101 chr10 106773663 106773752 -33543013 - L3 LINE CR1 -65 1512 1432 277 234 84 0 chr10 106774086 106774193 -33542572 - L1MC4 LINE L1 -3 8039 7924 2060 143 0 10 chr10 106774298 106774592 -33542173 - AluJb SINE Alu -21 291 1 2305 83 7 0 chr10 106774670 106774958 -33541807 - AluY SINE Alu -21 290 1 2135 135 0 3 chr10 106774991 106775287 -33541478 + AluSx SINE Alu 1 295 -17 2418 94 0 0 chr10 106775290 106775620 -33541145 + AluSp SINE Alu 1 330 0 419 251 57 86 chr10 106776019 106776162 -33540603 - MIR SINE MIR -87 175 36 1941 169 0 3 chr10 106776162 106776463 -33540302 - AluJo SINE Alu -12 300 1 419 251 57 86 chr10 106776463 106776494 -33540271 - MIR SINE MIR -226 36 6 1866 181 6 16 chr10 106777234 106777549 -33539216 + AluJo SINE Alu 1 312 0 376 284 51 130 chr10 106777852 106778144 -33538621 - L2 LINE L2 0 3272 3004 1919 152 7 7 chr10 106778335 106778637 -33538128 - AluJb SINE Alu -9 303 2 2454 83 3 0 chr10 106779767 106780067 -33536698 - AluSx SINE Alu -11 301 1 498 163 0 0 chr10 106780565 106780651 -33536114 - AluSx SINE Alu 0 310 225 1052 109 7 27 chr10 106780652 106780799 -33535966 - AluSx SINE Alu -142 170 27 1988 71 107 0 chr10 106781005 106781257 -33535508 - AluSc SINE Alu -17 292 14 2453 88 3 0 chr10 106781293 106781590 -33535175 + AluSq SINE Alu 1 298 -15 1067 169 6 0 chr10 106781590 106781768 -33534997 + AluSg/x SINE Alu 132 310 0 1023 204 67 8 chr10 106782562 106782799 -33533966 - MIR SINE MIR -1 261 17 432 118 0 0 chr10 106782944 106783012 -33533753 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 1656 159 59 0 chr10 106783012 106783282 -33533483 - AluJb SINE Alu -26 286 1 2385 63 10 7 chr10 106783309 106783611 -33533154 + AluY SINE Alu 1 303 -8 2207 106 7 13 chr10 106783694 106783996 -33532769 + AluSq SINE Alu 1 300 -13 2427 80 0 0 chr10 106784234 106784523 -33532242 - AluSx SINE Alu -23 289 1 4851 140 19 22 chr10 106784523 106784656 -33532109 - L1MC2 LINE L1 -109 6235 6103 2557 79 0 6 chr10 106784656 106784971 -33531794 - AluSq SINE Alu 0 313 1 4851 140 19 22 chr10 106784971 106785735 -33531030 - L1MC2 LINE L1 -241 6103 5341 182 412 0 0 chr10 106787268 106787336 -33529429 - L2 LINE L2 -45 3268 3201 641 253 107 20 chr10 106788240 106788621 -33528144 + L2 LINE L2 2717 3128 -185 858 141 8 0 chr10 106788635 106788756 -33528009 - FLAM_C SINE Alu -21 122 1 2406 94 16 0 chr10 106788765 106789072 -33527693 - AluSx SINE Alu 0 312 1 344 182 222 97 chr10 106789126 106789302 -33527463 + L2 LINE L2 3116 3313 0 2180 125 3 0 chr10 106789544 106789861 -33526904 - AluSx SINE Alu 0 318 1 191 317 0 0 chr10 106789897 106789938 -33526827 + L2 LINE L2 3207 3247 -25 2102 133 0 29 chr10 106789939 106790255 -33526510 - AluSx SINE Alu -5 307 1 447 287 105 11 chr10 106790258 106790439 -33526326 - L2 LINE L2 -9 3304 3107 2035 112 47 0 chr10 106790440 106790716 -33526049 + 7SLRNA srpRNA srpRNA 29 317 -3 2190 121 3 3 chr10 106790723 106791028 -33525737 + AluJb SINE Alu 2 306 -6 213 217 183 0 chr10 106791102 106791162 -33525603 - L2 LINE L2 -217 3055 2985 * 317 218 90 13 chr10 106791161 106791239 -33525526 - MER91C DNA MER1_type -25 115 32 405 268 35 14 chr10 106791249 106791391 -33525374 - L2 LINE L2 -341 2972 2828 2511 66 0 22 chr10 106791436 106791754 -33525011 - AluY SINE Alu 0 311 1 189 74 0 0 chr10 106791951 106791978 -33524787 + (TA)n Simple_repeat Simple_repeat 2 28 0 2005 158 3 3 chr10 106792745 106793043 -33523722 + AluJo SINE Alu 6 303 -9 198 103 0 0 chr10 106793402 106793431 -33523334 + (T)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr10 106793640 106793668 -33523097 + AT_rich Low_complexity Low_complexity 1 28 0 807 70 0 0 chr10 106793944 106794044 -33522721 + AluSg SINE Alu 1 100 -210 517 153 0 0 chr10 106794045 106794117 -33522648 + AluJb SINE Alu 211 282 -30 2253 71 0 0 chr10 106794157 106794425 -33522340 + AluSc SINE Alu 41 308 -1 488 264 179 10 chr10 106794448 106794649 -33522116 - MIR SINE MIR -20 242 8 2101 150 3 0 chr10 106794900 106795206 -33521559 - AluJo SINE Alu -5 307 1 1742 175 0 53 chr10 106795408 106795728 -33521037 + AluJo SINE Alu 1 303 -9 457 285 142 61 chr10 106796162 106796412 -33520353 - LTR33 LTR ERVL -100 421 134 1927 125 0 46 chr10 106796412 106796717 -33520048 - AluSx SINE Alu -17 295 5 457 285 142 61 chr10 106796717 106796810 -33519955 - LTR33 LTR ERVL -387 134 50 897 216 93 13 chr10 106796812 106797048 -33519717 - MLT1E LTR MaLR -2 591 337 224 276 236 51 chr10 106797222 106797613 -33519152 - L2 LINE L2 -466 2848 2531 2005 192 102 11 chr10 106797613 106797742 -33519023 - MLT1D LTR MaLR -4 501 385 2012 148 0 7 chr10 106797742 106798039 -33518726 + AluJb SINE Alu 1 295 -17 2005 192 102 11 chr10 106798039 106798368 -33518397 - MLT1D LTR MaLR -120 385 1 224 276 236 51 chr10 106798368 106798585 -33518180 - L2 LINE L2 -783 2531 2127 2385 78 3 0 chr10 106798599 106798892 -33517873 + AluY SINE Alu 1 294 -17 2370 100 0 3 chr10 106799657 106799966 -33516799 + AluSc SINE Alu 1 308 -1 348 192 77 67 chr10 106800294 106800383 -33516382 - L2 LINE L2 -34 3279 3192 393 39 0 0 chr10 106800383 106800434 -33516331 + (ATG)n Simple_repeat Simple_repeat 2 52 0 1899 121 14 28 chr10 106800434 106800723 -33516042 - AluSx SINE Alu -27 285 1 348 192 77 67 chr10 106800723 106800736 -33516029 - L2 LINE L2 -120 3193 3175 2496 88 0 0 chr10 106800807 106801114 -33515651 - AluSc SINE Alu -2 307 1 2044 150 0 0 chr10 106801276 106801563 -33515202 - AluSx SINE Alu -25 287 1 1767 193 7 0 chr10 106801582 106801883 -33514882 - AluJb SINE Alu -9 303 1 3601 135 48 2 chr10 106801884 106802493 -33514272 - L1MB3 LINE L1 -32 6151 5515 341 286 55 35 chr10 106802657 106802856 -33513909 - L1ME4a LINE L1 -289 5832 5630 232 252 135 45 chr10 106802868 106802979 -33513786 - MIR SINE MIR 0 262 142 1087 123 18 110 chr10 106802980 106803208 -33513557 - L1MC1 LINE L1 0 6333 6127 819 183 14 16 chr10 106803246 106803409 -33513356 - MIR SINE MIR -65 143 5 575 165 78 0 chr10 106803492 106803595 -33513170 + MER81 DNA DNA 3 113 -1 4812 190 166 94 chr10 106803625 106804161 -33512604 - L1MC4a LINE L1 -246 7562 7066 180 111 0 0 chr10 106804161 106804188 -33512577 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 4812 190 166 94 chr10 106804188 106804264 -33512501 - L1MC4a LINE L1 -742 7066 6997 316 241 0 0 chr10 106804264 106804350 -33512415 - MLT2D LTR ERVL -40 480 297 4812 190 166 94 chr10 106804350 106804821 -33511944 - L1MC4a LINE L1 -811 6997 6561 2277 116 0 0 chr10 106804821 106805115 -33511650 + AluSx SINE Alu 1 294 -18 4812 190 166 94 chr10 106805115 106805192 -33511573 - L1MC4a LINE L1 -1247 6561 6491 2301 106 0 0 chr10 106805192 106805485 -33511280 + AluSx SINE Alu 1 293 -19 4812 190 166 94 chr10 106805485 106805836 -33510929 - L1MC4a LINE L1 -1317 6491 6167 2374 74 0 0 chr10 106805836 106806151 -33510614 - AluSx SINE Alu 0 315 1 2041 133 6 43 chr10 106806151 106806328 -33510437 - AluSq SINE Alu -1 312 130 2050 88 4 11 chr10 106806328 106806591 -33510174 - AluSp SINE Alu -7 306 46 2380 86 0 0 chr10 106806592 106806883 -33509882 - AluSg SINE Alu -19 291 1 2041 133 6 43 chr10 106806883 106807027 -33509738 - AluSq SINE Alu -182 131 1 4812 190 166 94 chr10 106807027 106807071 -33509694 - L1MC4a LINE L1 -1641 6167 6128 2087 157 0 0 chr10 106807071 106807377 -33509388 - AluJb SINE Alu -6 306 1 4812 190 166 94 chr10 106807377 106807844 -33508921 - L1MC4a LINE L1 -1680 6128 5296 1037 192 30 34 chr10 106807872 106808138 -33508627 - L1MB8 LINE L1 -12 6166 5902 389 143 9 0 chr10 106808153 106808223 -33508542 - L1MB8 LINE L1 -252 5926 5867 680 145 8 17 chr10 106808265 106808382 -33508383 - MIR SINE MIR -74 188 73 889 201 0 0 chr10 106808417 106808561 -33508204 + AluJb SINE Alu 149 292 -20 283 276 132 40 chr10 106808562 106808714 -33508051 + MIR SINE MIR 26 191 -71 3971 155 28 34 chr10 106808732 106808871 -33507894 - L1MB7 LINE L1 -4 6180 6042 2294 118 7 0 chr10 106808871 106809175 -33507590 + AluSx SINE Alu 1 306 -6 3971 155 28 34 chr10 106809175 106809557 -33507208 - L1MB7 LINE L1 -142 6042 5659 1723 146 0 79 chr10 106809557 106809887 -33506878 - AluJb SINE Alu -8 304 1 3971 155 28 34 chr10 106809887 106810145 -33506620 - L1MB7 LINE L1 -525 5659 5403 2179 128 0 0 chr10 106810145 106810443 -33506322 + AluSx SINE Alu 1 298 -14 3971 155 28 34 chr10 106810443 106810456 -33506309 - L1MB7 LINE L1 -781 5403 5391 327 285 59 38 chr10 106810810 106810996 -33505769 - L3b LINE CR1 -111 1472 1283 1485 203 58 4 chr10 106811993 106812269 -33504496 + AluJb SINE Alu 1 291 -21 260 151 0 19 chr10 106812269 106812322 -33504443 + GA-rich Low_complexity Low_complexity 1 52 0 1691 154 17 27 chr10 106812322 106812614 -33504151 + AluJo SINE Alu 1 289 -23 263 96 19 0 chr10 106812617 106812669 -33504096 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2029 140 67 20 chr10 106813636 106813994 -33502771 - THE1C LTR MaLR 0 375 1 463 264 164 13 chr10 106815006 106815165 -33501600 + MER5A DNA MER1_type 4 186 -3 2242 107 3 7 chr10 106815196 106815496 -33501269 - AluSp SINE Alu -14 299 1 218 391 35 9 chr10 106815694 106815809 -33500956 - MER5B DNA MER1_type 0 178 61 2203 122 0 3 chr10 106815809 106816105 -33500660 + AluSx SINE Alu 1 295 -17 2418 94 0 0 chr10 106816108 106816438 -33500327 + AluSp SINE Alu 1 330 0 419 251 57 86 chr10 106816837 106816980 -33499785 - MIR SINE MIR -87 175 36 1941 169 0 3 chr10 106816980 106817281 -33499484 - AluJo SINE Alu -12 300 1 419 251 57 86 chr10 106817281 106817312 -33499453 - MIR SINE MIR -226 36 6 1866 181 6 16 chr10 106818052 106818367 -33498398 + AluJo SINE Alu 1 312 0 376 284 51 130 chr10 106818670 106818962 -33497803 - L2 LINE L2 0 3272 3004 1919 152 7 7 chr10 106819153 106819455 -33497310 - AluJb SINE Alu -9 303 2 2454 83 3 0 chr10 106820585 106820885 -33495880 - AluSx SINE Alu -11 301 1 498 163 0 0 chr10 106821383 106821469 -33495296 - AluSx SINE Alu 0 311 226 1052 109 7 27 chr10 106821470 106821617 -33495148 - AluSx SINE Alu -142 170 27 1988 71 107 0 chr10 106821823 106822075 -33494690 - AluSc SINE Alu -17 292 14 454 152 0 0 chr10 106822111 106822177 -33494588 + AluS SINE Alu 1 66 -247 1371 176 5 14 chr10 106822714 106822935 -33493830 - AluJo SINE Alu -93 219 1 3738 157 51 92 chr10 106823170 106823824 -33492941 + MER21B LTR ERV1 1 610 -253 848 118 7 22 chr10 106823824 106823959 -33492806 + FLAM_C SINE Alu 1 133 0 3738 157 51 92 chr10 106823959 106824203 -33492562 + MER21B LTR ERV1 610 862 -1 996 100 18 3 chr10 106824937 106825163 -33491602 + AluJb SINE Alu 5 299 -13 898 113 0 50 chr10 106825254 106825395 -33491370 + AluJo SINE Alu 1 134 -178 2123 130 0 55 chr10 106825769 106825952 -33490813 - AluSx SINE Alu 0 312 121 186 43 0 0 chr10 106825952 106825975 -33490790 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2253 97 0 0 chr10 106825977 106826255 -33490510 - AluSg SINE Alu -31 279 2 2123 130 0 55 chr10 106826255 106826398 -33490367 - AluSx SINE Alu -192 120 1 838 139 8 0 chr10 106826399 106826521 -33490244 - AluJb SINE Alu -13 299 177 221 255 255 19 chr10 106826539 106826645 -33490120 - MIR SINE MIR -112 150 20 1983 136 0 14 chr10 106826684 106826819 -33489946 + AluSx SINE Alu 1 136 -176 2248 83 3 33 chr10 106826819 106827121 -33489644 + AluSc SINE Alu 1 293 -16 1983 136 0 14 chr10 106827121 106827272 -33489493 + AluSx SINE Alu 136 283 -29 459 0 0 0 chr10 106827275 106827326 -33489439 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1164 76 14 0 chr10 106827724 106827868 -33488897 + AluSg/x SINE Alu 154 299 -11 2465 93 0 0 chr10 106827868 106828168 -33488597 + AluSx SINE Alu 1 300 -12 1875 130 0 0 chr10 106828930 106829176 -33487589 + AluJb SINE Alu 1 246 -66 245 224 52 0 chr10 106829207 106829265 -33487500 + AluJb SINE Alu 234 294 -8 2333 103 3 0 chr10 106829886 106830187 -33486578 - AluSx SINE Alu -10 302 1 2627 214 47 57 chr10 106834487 106834948 -33481817 + L1MD2 LINE L1 4255 4719 -1427 2266 108 10 0 chr10 106834948 106835245 -33481520 + AluSx SINE Alu 1 300 -12 2627 214 47 57 chr10 106835245 106835271 -33481494 + L1MD2 LINE L1 4719 4744 -1402 2015 79 20 0 chr10 106835271 106835525 -33481240 + AluSg SINE Alu 35 293 -17 2627 214 47 57 chr10 106835525 106835536 -33481229 + L1MD2 LINE L1 4744 4754 -1392 2153 106 28 0 chr10 106835536 106835819 -33480946 + AluSp SINE Alu 1 291 -22 2627 214 47 57 chr10 106835819 106836167 -33480598 + L1MD2 LINE L1 4754 5095 -1051 3447 173 71 30 chr10 106836250 106836607 -33480158 + L1MD2 LINE L1 5079 5420 -939 1847 126 41 4 chr10 106836607 106836878 -33479887 + AluSx SINE Alu 14 294 -18 3447 173 71 30 chr10 106836878 106837370 -33479395 + L1MD2 LINE L1 5420 5971 -388 2321 102 7 0 chr10 106837370 106837664 -33479101 + AluSx SINE Alu 1 296 -16 3447 173 71 30 chr10 106837664 106837734 -33479031 + L1MD2 LINE L1 5971 6037 -322 1184 133 6 0 chr10 106837734 106837900 -33478865 + FRAM SINE Alu 1 160 -16 1198 179 103 3 chr10 106837900 106838191 -33478574 + L1MD2 LINE L1 6035 6354 -5 2001 137 0 52 chr10 106838191 106838519 -33478246 + AluJo SINE Alu 1 311 -1 2167 91 4 0 chr10 106839734 106840010 -33476755 - AluY SINE Alu -30 281 5 243 298 6 63 chr10 106840940 106841098 -33475667 + HAL1b LINE L1 1193 1341 -7 303 295 88 56 chr10 106841220 106841295 -33475470 - L1ME4a LINE L1 -210 5911 5840 2512 92 0 0 chr10 106841295 106841601 -33475164 + AluSq SINE Alu 1 306 -7 564 42 0 0 chr10 106841601 106841672 -33475093 + (TA)n Simple_repeat Simple_repeat 2 72 0 303 295 88 56 chr10 106841672 106841914 -33474851 - L1ME4a LINE L1 -280 5841 5583 498 290 118 94 chr10 106842467 106842901 -33473864 + L3 LINE CR1 1083 1526 -51 2005 90 0 4 chr10 106842935 106843208 -33473557 - AluSg SINE Alu 0 308 37 248 277 27 88 chr10 106843662 106843810 -33472955 - MIR SINE MIR -56 206 68 2136 133 20 0 chr10 106844086 106844209 -33472556 + AluSx SINE Alu 1 120 -192 239 0 0 31 chr10 106844209 106844241 -33472524 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2136 133 20 0 chr10 106844241 106844417 -33472348 + AluSx SINE Alu 120 306 -6 542 197 12 189 chr10 106844433 106844677 -33472088 - MLT1E LTR MaLR -76 517 317 269 154 0 39 chr10 106844725 106844777 -33471988 - MLT1E LTR MaLR -394 260 211 2206 96 0 33 chr10 106844777 106845079 -33471686 - AluSq SINE Alu -21 292 1 2196 123 0 13 chr10 106845086 106845395 -33471370 - AluSg SINE Alu -5 305 1 3992 131 47 39 chr10 106845978 106846705 -33470060 + L1MB3 LINE L1 5448 6180 -3 468 112 10 82 chr10 106847102 106847200 -33469565 + AluY SINE Alu 216 306 -5 2143 94 7 49 chr10 106847249 106847420 -33469345 - AluSx SINE Alu -17 295 141 2271 100 3 7 chr10 106847420 106847721 -33469044 - AluSg SINE Alu -10 300 1 2143 94 7 49 chr10 106847721 106847857 -33468908 - AluSx SINE Alu -171 141 1 392 292 131 7 chr10 106847920 106848057 -33468708 - MIR SINE MIR -94 168 15 2480 54 0 7 chr10 106848359 106848654 -33468111 + AluY SINE Alu 1 293 -18 881 255 33 0 chr10 106848950 106849162 -33467603 - MER58A DNA MER1_type -5 219 1 2018 152 0 0 chr10 106849572 106849861 -33466904 + AluSx SINE Alu 1 289 -23 886 151 0 121 chr10 106850480 106850679 -33466086 - AluJb SINE Alu -1 311 137 220 292 158 25 chr10 106850891 106851011 -33465754 + L2 LINE L2 3158 3293 -20 2199 133 0 0 chr10 106851302 106851596 -33465169 - AluSx SINE Alu -18 294 1 2164 86 4 7 chr10 106851644 106851961 -33464804 - AluSc SINE Alu 0 317 2 2088 156 0 0 chr10 106852236 106852537 -33464228 + AluJb SINE Alu 1 301 -11 1136 163 0 5 chr10 106852658 106852842 -33463923 + AluSg/x SINE Alu 125 307 -5 529 255 114 75 chr10 106853010 106853062 -33463703 + L1ME4a LINE L1 5619 5667 -454 2270 95 3 20 chr10 106853062 106853368 -33463397 + AluSq SINE Alu 1 301 -12 529 255 114 75 chr10 106853368 106853618 -33463147 + L1ME4a LINE L1 5667 5949 -172 2228 114 0 17 chr10 106853618 106853917 -33462848 - AluSx SINE Alu -18 294 1 529 255 114 75 chr10 106853917 106854095 -33462670 + L1ME4a LINE L1 5949 6119 -2 226 180 100 0 chr10 106854840 106854890 -33461875 + MLT1L LTR MaLR 19 73 -542 873 296 68 10 chr10 106854955 106855340 -33461425 + MLT1L LTR MaLR 209 615 0 1606 192 7 33 chr10 106855694 106856001 -33460764 + AluJo SINE Alu 1 299 -13 2146 130 3 22 chr10 106856003 106856319 -33460446 + AluSx SINE Alu 1 310 -2 462 282 101 44 chr10 106856349 106856557 -33460208 + MLT1K LTR MaLR 297 523 -65 1694 114 17 136 chr10 106856557 106856909 -33459856 - AluJb SINE Alu -2 310 1 462 282 101 44 chr10 106856909 106856948 -33459817 + MLT1K LTR MaLR 523 558 -30 1002 166 80 0 chr10 106856948 106857111 -33459654 - AluJb SINE Alu -3 309 134 1829 113 64 35 chr10 106857111 106857394 -33459371 - AluSx SINE Alu -17 295 5 315 122 0 0 chr10 106857404 106857453 -33459312 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 2223 97 21 0 chr10 106857453 106857743 -33459022 - AluSx SINE Alu -16 296 1 2526 79 0 0 chr10 106858913 106859217 -33457548 - AluY SINE Alu -7 304 1 706 251 164 5 chr10 106859272 106859479 -33457286 - MIR SINE MIR -21 241 2 545 216 120 6 chr10 106859605 106859772 -33456993 + L1ME3A LINE L1 5935 6120 -50 2377 108 0 0 chr10 106859777 106860083 -33456682 - AluSq SINE Alu -7 306 1 1701 199 7 7 chr10 106860085 106860391 -33456374 - AluJb SINE Alu -6 306 1 298 282 14 78 chr10 106860406 106860440 -33456325 + MIR SINE MIR 36 71 -191 2540 67 0 0 chr10 106860440 106860738 -33456027 + AluY SINE Alu 1 298 -13 298 282 14 78 chr10 106860738 106860845 -33455920 + MIR SINE MIR 71 168 -94 1378 227 56 88 chr10 106861263 106861761 -33455004 - L1MC4 LINE L1 -1 8041 7568 1599 163 47 0 chr10 106861761 106862018 -33454747 - AluJo SINE Alu -21 291 23 1378 227 56 88 chr10 106862018 106862176 -33454589 - L1MC4 LINE L1 -474 7568 7406 2424 76 0 3 chr10 106862178 106862479 -33454286 + AluY SINE Alu 1 300 -11 713 162 14 35 chr10 106862614 106862756 -33454009 - MLT1E LTR MaLR -454 139 1 350 257 160 49 chr10 106862843 106862987 -33453778 + L1MC4a LINE L1 6308 6467 -1341 991 218 0 5 chr10 106863016 106863204 -33453561 + AluJo SINE Alu 121 307 -5 2342 82 14 3 chr10 106863345 106863637 -33453128 + AluSg SINE Alu 1 295 -15 948 174 14 0 chr10 106863640 106863784 -33452981 + AluJb SINE Alu 141 286 -26 2365 144 72 8 chr10 106863857 106864259 -33452506 - MSTC LTR MaLR 0 428 1 1704 162 17 30 chr10 106864416 106864712 -33452053 - AluJb SINE Alu -20 292 1 582 282 53 23 chr10 106864990 106865256 -33451509 - L1ME LINE L1 -341 5821 5548 1598 181 34 20 chr10 106865275 106865567 -33451198 - AluJo SINE Alu -16 296 1 1767 115 0 0 chr10 106865640 106865875 -33450890 - AluSg/x SINE Alu -2 308 74 1772 155 43 26 chr10 106865901 106866205 -33450560 - AluJb SINE Alu -3 309 1 2517 63 0 3 chr10 106866246 106866547 -33450218 - AluY SINE Alu -11 300 1 1481 53 0 6 chr10 106866602 106866771 -33449994 + AluY SINE Alu 11 178 -133 530 65 0 0 chr10 106866771 106866848 -33449917 + AluY SINE Alu 234 310 0 2242 127 0 19 chr10 106866862 106867000 -33449765 + AluSx SINE Alu 1 140 -172 2101 125 14 0 chr10 106867000 106867288 -33449477 + AluSc SINE Alu 3 294 -15 2242 127 0 19 chr10 106867288 106867464 -33449301 + AluSx SINE Alu 140 309 -3 2383 116 7 0 chr10 106869465 106869775 -33446990 + AluSx SINE Alu 1 312 0 1590 27 11 0 chr10 106872274 106872460 -33444305 - L1PA4 LINE L1 -1 6154 5967 881 120 15 15 chr10 106872913 106873046 -33443719 - FLAM_C SINE Alu 0 133 1 574 205 139 82 chr10 106873104 106873421 -33443344 - MER113 DNA MER1_type? -180 341 7 200 273 171 11 chr10 106873442 106873530 -33443235 + MIR3 SINE MIR 72 173 -35 239 140 40 0 chr10 106873697 106873747 -33443018 - L1MB7 LINE L1 0 6184 6133 1128 165 94 12 chr10 106873758 106874013 -33442752 - L1MB8 LINE L1 -130 6048 5773 306 141 14 42 chr10 106873990 106874061 -33442704 - L1ME LINE L1 -670 5500 5432 * 1660 151 0 42 chr10 106874062 106874346 -33442419 - AluJb SINE Alu -2 310 39 505 97 0 142 chr10 106874371 106874454 -33442311 - L1ME LINE L1 -743 5441 5376 2356 98 7 0 chr10 106874454 106874750 -33442015 - AluSx SINE Alu -14 298 1 505 97 0 142 chr10 106874750 106874779 -33441986 - L1ME LINE L1 -808 5376 5345 6205 199 42 61 chr10 106874899 106874994 -33441771 - L1ME LINE L1 -865 5281 5186 2535 55 0 0 chr10 106874994 106875286 -33441479 + AluY SINE Alu 3 294 -17 4496 138 8 23 chr10 106875286 106876060 -33440705 - L1MB3 LINE L1 -9 6174 5413 6205 199 42 61 chr10 106876060 106876096 -33440669 - L1ME LINE L1 -959 5187 5152 2364 87 0 7 chr10 106876096 106876394 -33440371 - AluSq SINE Alu -17 296 1 6205 199 42 61 chr10 106876394 106876715 -33440050 - L1ME LINE L1 -994 5152 4826 2522 69 10 0 chr10 106876715 106877019 -33439746 + AluY SINE Alu 1 307 -4 6205 199 42 61 chr10 106877019 106877484 -33439281 - L1ME LINE L1 -1320 4826 4354 1718 188 0 16 chr10 106877484 106877828 -33438937 - AluJo SINE Alu 0 312 1 6205 199 42 61 chr10 106877828 106878035 -33438730 - L1ME LINE L1 -1792 4354 4145 2436 113 0 0 chr10 106878035 106878346 -33438419 - AluSx SINE Alu -1 311 1 6205 199 42 61 chr10 106878346 106878747 -33438018 - L1ME LINE L1 -2001 4145 3787 2398 82 0 25 chr10 106878747 106879065 -33437700 - AluSg SINE Alu 0 310 1 6205 199 42 61 chr10 106879065 106879330 -33437435 - L1ME LINE L1 -2359 3787 3519 180 77 0 0 chr10 106879645 106879671 -33437094 + (TG)n Simple_repeat Simple_repeat 2 27 0 2273 98 0 3 chr10 106879820 106880115 -33436650 + AluSc SINE Alu 2 295 -14 907 48 0 0 chr10 106880124 106880228 -33436537 + U6 snRNA snRNA 1 104 -3 957 332 135 43 chr10 106881356 106882000 -33434765 - L3 LINE CR1 -476 1101 399 2362 89 0 49 chr10 106882015 106882341 -33434424 - AluSx SINE Alu -2 310 1 23 0 0 0 chr10 106882397 106882420 -33434345 + AT_rich Low_complexity Low_complexity 1 23 0 258 389 145 4 chr10 106882420 106882682 -33434083 - L3 LINE CR1 -1199 378 80 665 272 53 15 chr10 106883135 106883341 -33433424 - MIR SINE MIR 0 262 49 696 184 65 6 chr10 106883821 106883989 -33432776 + L1M4 LINE L1 4991 5168 -978 2486 51 0 7 chr10 106883994 106884290 -33432475 + AluY SINE Alu 1 294 -17 3887 167 14 22 chr10 106884290 106885058 -33431707 - L1MB3 LINE L1 -9 6174 5413 2668 47 0 0 chr10 106885094 106885390 -33431375 - AluSq SINE Alu -17 296 1 1642 244 52 2 chr10 106885394 106885891 -33430874 - L1MB3 LINE L1 -1378 4768 4247 1870 113 89 17 chr10 106885896 106886188 -33430577 - AluSp SINE Alu 0 313 1 1068 208 38 19 chr10 106886188 106886453 -33430312 - L1MB3 LINE L1 -2358 3788 3519 180 77 0 0 chr10 106886768 106886794 -33429971 + (TG)n Simple_repeat Simple_repeat 2 27 0 2061 125 0 7 chr10 106886943 106887239 -33429526 + AluSc SINE Alu 2 295 -14 877 48 0 9 chr10 106887248 106887353 -33429412 + U6 snRNA snRNA 1 104 -3 602 225 75 53 chr10 106888860 106888963 -33427802 - MIR SINE MIR 0 262 163 1151 237 90 6 chr10 106888963 106889275 -33427490 - MER46C DNA MER2_type 0 338 1 602 225 75 53 chr10 106889275 106889398 -33427367 - MIR SINE MIR -99 163 31 2314 101 0 7 chr10 106890348 106890654 -33426111 - AluSx SINE Alu -8 304 1 1058 237 9 9 chr10 106890698 106890917 -33425848 - MIR SINE MIR -36 226 8 739 214 77 20 chr10 106891635 106891708 -33425057 - MER3 DNA MER1_type -1 208 141 2291 92 17 0 chr10 106891708 106892002 -33424763 + AluSp SINE Alu 1 299 -14 739 214 77 20 chr10 106892002 106892124 -33424641 - MER3 DNA MER1_type -68 141 2 2427 66 3 13 chr10 106893195 106893497 -33423268 + AluSq SINE Alu 1 299 -14 1896 127 4 0 chr10 106895120 106895379 -33421386 - AluSx SINE Alu -13 299 40 2306 117 0 7 chr10 106895421 106895730 -33421035 - AluSx SINE Alu -5 307 1 304 266 88 26 chr10 106896264 106896377 -33420388 + MER5B DNA MER1_type 11 130 -48 1428 141 15 111 chr10 106896377 106896547 -33420218 - AluSp SINE Alu 0 303 179 2322 92 0 7 chr10 106896547 106896853 -33419912 - AluY SINE Alu -7 304 1 1428 141 15 111 chr10 106896853 106897016 -33419749 - AluSp SINE Alu -124 179 2 295 202 40 30 chr10 106897016 106897115 -33419650 - AluSq/x SINE Alu -167 136 37 203 256 7 51 chr10 106897584 106897721 -33419044 + CT-rich Low_complexity Low_complexity 3 133 0 2296 109 3 13 chr10 106898427 106898739 -33418026 - AluSp SINE Alu -4 309 1 289 189 18 126 chr10 106898914 106898995 -33417770 + MIR3 SINE MIR 107 174 -34 2348 89 10 3 chr10 106898995 106899298 -33417467 - AluSg SINE Alu -5 305 1 289 189 18 126 chr10 106899298 106899327 -33417438 + MIR3 SINE MIR 174 205 -3 258 344 0 62 chr10 106899686 106899782 -33416983 - L2 LINE L2 -67 3205 3116 23 33 0 0 chr10 106900745 106900775 -33415990 + AT_rich Low_complexity Low_complexity 1 30 0 225 94 0 0 chr10 106901867 106901899 -33414866 + (CA)n Simple_repeat Simple_repeat 2 33 0 189 74 0 0 chr10 106902227 106902254 -33414511 + (CCCCAG)n Simple_repeat Simple_repeat 4 30 0 252 184 0 0 chr10 106903662 106903711 -33413054 + (CA)n Simple_repeat Simple_repeat 1 49 0 248 277 27 88 chr10 106904275 106904423 -33412342 - MIR SINE MIR -56 206 68 2082 132 20 0 chr10 106904702 106904823 -33411942 + AluSx SINE Alu 3 120 -192 239 0 0 31 chr10 106904823 106904855 -33411910 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2082 132 20 0 chr10 106904855 106905036 -33411729 + AluSx SINE Alu 120 311 -1 508 153 3 18 chr10 106905179 106905215 -33411550 + L1MB8 LINE L1 5328 5363 -821 2476 74 7 0 chr10 106905215 106905511 -33411254 + AluSx SINE Alu 1 298 -14 508 153 3 18 chr10 106905511 106905594 -33411171 + L1MB8 LINE L1 5363 5441 -743 1639 155 0 42 chr10 106905619 106905903 -33410862 + AluJb SINE Alu 39 310 -2 299 155 14 42 chr10 106905904 106905975 -33410790 + L1MB8 LINE L1 5432 5500 -670 * 1128 165 94 12 chr10 106905952 106906207 -33410558 + L1MB8 LINE L1 5773 6048 -130 239 140 40 0 chr10 106906218 106906268 -33410497 + L1MB7 LINE L1 6133 6184 0 407 247 33 8 chr10 106906687 106906817 -33409948 + MIR SINE MIR 38 168 -62 220 167 37 0 chr10 106907692 106907746 -33409019 + T-rich Low_complexity Low_complexity 5 60 0 201 39 0 0 chr10 106908268 106908294 -33408471 + (TAA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 106908298 106908321 -33408444 + AT_rich Low_complexity Low_complexity 1 23 0 266 212 76 0 chr10 106908844 106908910 -33407855 - L2 LINE L2 -2 3311 3241 208 212 44 159 chr10 106909080 106909118 -33407647 + MER5A DNA MER1_type 40 81 -108 1542 183 17 43 chr10 106909118 106909419 -33407346 + AluJb SINE Alu 9 301 -11 208 212 44 159 chr10 106909419 106909493 -33407272 + MER5A DNA MER1_type 81 139 -50 2396 91 3 0 chr10 106909822 106910119 -33406646 + AluSx SINE Alu 2 299 -13 1711 147 33 17 chr10 106910186 106910486 -33406279 + AluJb SINE Alu 2 306 -6 208 242 275 0 chr10 106912887 106912978 -33403787 + MER91A DNA MER1_type 8 123 -73 504 307 14 0 chr10 106913440 106913580 -33403185 + MIR SINE MIR 56 197 -65 456 302 78 24 chr10 106913858 106914063 -33402702 + MIR SINE MIR 9 224 -38 2085 125 0 0 chr10 106914683 106914978 -33401787 + AluSg SINE Alu 1 295 -15 1074 236 21 0 chr10 106915736 106915977 -33400788 + MER58 DNA MER1_type 33 278 -2142 2633 24 0 0 chr10 106915977 106916275 -33400490 + L1PA2 LINE L1 5858 6155 0 2328 87 0 0 chr10 106920180 106920480 -33396285 + AluSp SINE Alu 1 300 -13 295 357 30 42 chr10 106920516 106920684 -33396081 - L2 LINE L2 -11 3261 3096 2275 107 0 0 chr10 106922916 106923216 -33393549 - AluSx SINE Alu -12 300 1 279 291 6 63 chr10 106923413 106923571 -33393194 - HAL1b LINE L1 -7 1341 1193 2396 63 10 0 chr10 106924501 106924801 -33391964 + AluY SINE Alu 5 307 -4 2309 224 19 14 chr10 106924805 106925280 -33391485 - L1M4 LINE L1 -1296 4850 4369 1544 181 0 17 chr10 106925280 106925610 -33391155 - AluJo SINE Alu 0 325 1 2309 224 19 14 chr10 106925610 106925699 -33391066 - L1M4 LINE L1 -1777 4369 4282 432 0 0 0 chr10 106926210 106926258 -33390507 + (TG)n Simple_repeat Simple_repeat 2 49 0 248 277 55 163 chr10 106932737 106933080 -33383685 - L2 LINE L2 -36 3236 2931 273 242 81 20 chr10 106933134 106933233 -33383532 - L2 LINE L2 -597 2717 2613 476 156 13 0 chr10 106933505 106933582 -33383183 - AluS SINE Alu -234 79 2 1702 175 0 19 chr10 106933735 106934050 -33382715 + AluJo SINE Alu 1 309 -3 2081 112 7 3 chr10 106934125 106934420 -33382345 + AluSx SINE Alu 1 296 -16 300 239 0 28 chr10 106935676 106935747 -33381018 + L1MCa LINE L1 1996 2064 -4362 374 273 23 0 chr10 106935850 106935938 -33380827 + L1MC4 LINE L1 6614 6703 -1339 234 239 33 76 chr10 106935949 106935974 -33380791 + MIR SINE MIR 121 146 -116 2330 67 0 19 chr10 106935974 106936287 -33380478 + AluY SINE Alu 1 307 -4 234 239 33 76 chr10 106936287 106936353 -33380412 + MIR SINE MIR 146 208 -54 23 0 0 0 chr10 106936395 106936418 -33380347 + AT_rich Low_complexity Low_complexity 1 23 0 194 61 0 30 chr10 106938793 106938826 -33377939 + (TCC)n Simple_repeat Simple_repeat 1 32 0 1795 114 0 52 chr10 106939544 106939852 -33376913 - AluJb SINE Alu -20 292 1 331 206 151 0 chr10 106940032 106940105 -33376660 - L2 LINE L2 -37 3276 3193 1562 138 81 30 chr10 106940167 106940463 -33376302 + AluJo SINE Alu 1 311 -1 2224 112 3 3 chr10 106941060 106941373 -33375392 - AluSp SINE Alu 0 313 1 287 209 19 76 chr10 106941548 106941623 -33375142 + MIR3 SINE MIR 107 176 -32 2200 98 10 3 chr10 106941623 106941930 -33374835 - AluSg SINE Alu -1 309 1 287 209 19 76 chr10 106941930 106941959 -33374806 + MIR3 SINE MIR 176 205 -3 242 354 0 62 chr10 106942318 106942414 -33374351 - L2 LINE L2 -67 3205 3116 261 57 0 0 chr10 106943315 106943350 -33373415 - Alu SINE Alu -254 48 14 2299 85 3 3 chr10 106943418 106943724 -33373041 - AluSg SINE Alu -4 306 1 2103 107 0 20 chr10 106943729 106944027 -33372738 - AluSg SINE Alu -18 292 1 856 213 0 0 chr10 106944027 106944177 -33372588 - FAM SINE Alu -11 174 25 1930 144 0 3 chr10 106944181 106944473 -33372292 - AluSx SINE Alu -21 291 1 972 222 3 56 chr10 106944489 106944795 -33371970 + AluJb SINE Alu 6 295 -17 1610 166 7 11 chr10 106945074 106945351 -33371414 + AluJb SINE Alu 22 297 -15 332 227 27 0 chr10 106945486 106945561 -33371204 + MLT2F LTR ERVL 10 86 -577 861 131 24 54 chr10 106945575 106945743 -33371022 + MLT1E3 LTR MaLR 52 214 -410 536 262 36 108 chr10 106945589 106945921 -33370844 + MLT2C1 LTR ERVL 45 352 -45 * 863 206 6 6 chr10 106945969 106946129 -33370636 + FRAM SINE Alu 11 170 -6 215 236 14 0 chr10 106946131 106946203 -33370562 + (TA)n Simple_repeat Simple_repeat 2 74 0 335 270 80 61 chr10 106946216 106946379 -33370386 - L1MCa LINE L1 -4334 2092 1927 21 36 0 0 chr10 106946388 106946416 -33370349 + AT_rich Low_complexity Low_complexity 1 28 0 533 169 0 0 chr10 106946433 106946516 -33370249 + AluJ/FLAM SINE Alu 1 83 -229 251 108 0 0 chr10 106946573 106946610 -33370155 + MLT2F LTR ERVL 624 660 -3 353 331 18 24 chr10 106946714 106946883 -33369882 + L2 LINE L2 2588 2755 -559 1298 161 164 28 chr10 106946920 106947244 -33369521 - L1MCb LINE L1 -4128 2436 2069 1664 168 0 49 chr10 106947246 106947574 -33369191 - AluJb SINE Alu 0 312 1 350 120 67 53 chr10 106947575 106947650 -33369115 - L1MCb LINE L1 -4590 1974 1899 1861 139 3 44 chr10 106947651 106947968 -33368797 - AluSx SINE Alu -8 304 1 2068 114 7 0 chr10 106947978 106948275 -33368490 - AluSx SINE Alu -13 299 1 2826 93 9 52 chr10 106948548 106948988 -33367777 - L1PA13 LINE L1 0 6163 5743 2796 183 39 76 chr10 106948992 106949145 -33367620 - L1MCb LINE L1 -4851 1194 1037 2265 89 0 0 chr10 106949145 106949437 -33367328 + AluSc SINE Alu 1 292 -17 2796 183 39 76 chr10 106949437 106949523 -33367242 - L1MCb LINE L1 -5008 1037 949 189 0 0 0 chr10 106949523 106949544 -33367221 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 2796 183 39 76 chr10 106949544 106950165 -33366600 - L1MCb LINE L1 -5096 949 307 1023 191 6 0 chr10 106950165 106950333 -33366432 + FAM SINE Alu 1 169 -6 1641 159 68 10 chr10 106950335 106950630 -33366135 + AluJo SINE Alu 1 312 0 2796 183 39 76 chr10 106950630 106950650 -33366115 - L1MCb LINE L1 -5739 306 430 2077 112 0 37 chr10 106950650 106950972 -33365793 - AluSg SINE Alu 0 310 1 2796 183 39 76 chr10 106950972 106951016 -33365749 - L1MCb LINE L1 -5614 431 387 219 267 38 57 chr10 106951063 106951168 -33365597 + L2 LINE L2 3159 3261 -11 744 304 18 0 chr10 106951956 106952173 -33364592 - MIR SINE MIR 0 262 42 305 275 80 107 chr10 106952398 106952736 -33364029 - L2 LINE L2 -34 3238 2910 2311 99 0 0 chr10 106952741 106953043 -33363722 + AluSx SINE Alu 1 302 -10 220 200 12 113 chr10 106953449 106953529 -33363236 - L2 LINE L2 0 3313 3242 469 192 0 0 chr10 106953549 106953622 -33363143 + AluS SINE Alu 2 74 -238 503 333 35 4 chr10 106953695 106953926 -33362839 - L2 LINE L2 -247 3066 2829 348 278 0 0 chr10 106955057 106955147 -33361618 + MIR SINE MIR 173 262 0 1085 80 0 0 chr10 106955393 106955530 -33361235 + AluSq/x SINE Alu 1 137 -176 2520 48 0 13 chr10 106955530 106955844 -33360921 + AluY SINE Alu 1 310 -1 306 311 53 46 chr10 106956162 106956313 -33360452 - L2 LINE L2 -12 3260 3109 803 181 13 7 chr10 106956648 106956797 -33359968 + MER3 DNA MER1_type 3 152 -57 837 167 13 82 chr10 106956803 106957080 -33359685 - AluJo SINE Alu -1 311 87 1128 171 0 60 chr10 106957083 106957317 -33359448 - AluJo SINE Alu -92 220 1 1129 124 5 27 chr10 106957322 106957533 -33359232 - AluSq SINE Alu 0 311 105 897 185 23 0 chr10 106957637 106957810 -33358955 - L1MB8 LINE L1 -183 5995 5819 2152 96 0 0 chr10 106957810 106958090 -33358675 - AluSp SINE Alu -29 284 5 329 189 27 27 chr10 106958093 106958204 -33358561 + CT-rich Low_complexity Low_complexity 3 113 0 351 155 0 0 chr10 106958256 106958314 -33358451 - MIR SINE MIR 0 262 205 430 134 0 61 chr10 106958348 106958430 -33358335 + AluS SINE Alu 2 78 -234 1921 151 0 13 chr10 106958717 106959029 -33357736 - AluSx SINE Alu 0 312 5 360 113 0 32 chr10 106959059 106959121 -33357644 + MIR SINE MIR 202 261 -1 2139 86 11 4 chr10 106963831 106964109 -33352656 - AluSx SINE Alu -22 290 11 574 146 0 208 chr10 106964114 106964183 -33352582 - AluJo SINE Alu -143 169 87 2205 141 0 0 chr10 106964183 106964495 -33352270 + AluJb SINE Alu 1 312 0 192 77 0 0 chr10 106964496 106964522 -33352243 + (TA)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr10 106964521 106964542 -33352223 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 574 146 0 208 chr10 106964522 106964682 -33352083 - AluJo SINE Alu -224 88 2 263 346 10 10 chr10 106964787 106964888 -33351877 - L2 LINE L2 -19 3294 3194 2478 88 0 7 chr10 106964903 106965208 -33351557 + AluSp SINE Alu 1 303 -10 2253 117 0 0 chr10 106965476 106965775 -33350990 - AluSx SINE Alu -13 299 1 2138 106 42 3 chr10 106966746 106967029 -33349736 - AluSx SINE Alu -18 294 1 228 282 227 0 chr10 106967125 106967235 -33349530 - L2 LINE L2 -185 3087 2953 2008 151 0 0 chr10 106967404 106967770 -33348995 - AluSx SINE Alu 0 367 2 2467 77 3 0 chr10 106967878 106968175 -33348590 + AluSp SINE Alu 1 298 -15 514 275 30 24 chr10 106968180 106968347 -33348418 - MIR SINE MIR -80 182 15 1757 145 0 4 chr10 106968439 106968688 -33348077 - AluJb SINE Alu -51 261 14 2358 104 0 16 chr10 106969114 106969432 -33347333 - AluSq SINE Alu 0 313 1 319 303 41 87 chr10 106969854 106970049 -33346716 - MIR SINE MIR -48 214 29 228 310 38 57 chr10 106970101 106970259 -33346506 - MIR SINE MIR -74 188 34 1681 137 24 73 chr10 106970482 106970810 -33345955 - AluJb SINE Alu 0 312 1 2331 99 13 0 chr10 106970820 106971123 -33345642 - AluSx SINE Alu -5 307 1 1596 175 35 111 chr10 106971169 106971627 -33345138 - MER63B DNA MER1_type -13 423 1 2293 174 40 11 chr10 106971796 106972243 -33344522 + MER66B LTR ERV1 27 486 0 343 167 53 105 chr10 106972706 106972820 -33343945 + MIR3 SINE MIR 48 155 -53 1909 156 3 3 chr10 106972821 106973109 -33343656 + AluJo SINE Alu 5 292 -20 1887 133 63 27 chr10 106973359 106973659 -33343106 - AluSx SINE Alu -1 311 1 466 321 30 12 chr10 106973819 106973987 -33342778 - MER5A DNA MER1_type -18 171 1 1933 127 62 0 chr10 106974154 106974445 -33342320 - AluSx SINE Alu -3 309 1 512 281 106 6 chr10 106975161 106975321 -33341444 - HAL1 LINE L1 -1593 914 739 2033 147 0 16 chr10 106975492 106975671 -33341094 - AluJb SINE Alu 0 312 139 2218 123 0 25 chr10 106975671 106975988 -33340777 - AluSx SINE Alu -3 309 1 2033 147 0 16 chr10 106975988 106976121 -33340644 - AluJb SINE Alu -173 139 5 834 148 0 15 chr10 106976217 106976352 -33340413 + FLAM_C SINE Alu 1 133 0 528 173 91 9 chr10 106976757 106976867 -33339898 - FLAM_A SINE Alu -14 128 10 1591 183 3 39 chr10 106978224 106978536 -33338229 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr10 106979188 106979209 -33337556 + AT_rich Low_complexity Low_complexity 1 21 0 2139 86 11 4 chr10 106980957 106981235 -33335530 - AluSx SINE Alu -22 290 11 509 143 0 250 chr10 106981240 106981309 -33335456 - AluJo SINE Alu -143 169 84 2216 138 0 0 chr10 106981309 106981620 -33335145 + AluJb SINE Alu 1 311 -1 210 71 0 0 chr10 106981621 106981649 -33335116 + (TA)n Simple_repeat Simple_repeat 1 28 0 509 143 0 250 chr10 106981649 106981801 -33334964 - AluJo SINE Alu -227 85 2 263 346 10 10 chr10 106981906 106982007 -33334758 - L2 LINE L2 -19 3294 3194 2470 89 0 7 chr10 106982022 106982326 -33334439 + AluSp SINE Alu 1 302 -11 2253 117 0 0 chr10 106982594 106982893 -33333872 - AluSx SINE Alu -13 299 1 2138 106 42 3 chr10 106983865 106984148 -33332617 - AluSx SINE Alu -18 294 1 228 282 227 0 chr10 106984244 106984354 -33332411 - L2 LINE L2 -185 3087 2953 2066 144 0 0 chr10 106984523 106984889 -33331876 - AluSx SINE Alu 0 367 2 2467 77 3 0 chr10 106984997 106985294 -33331471 + AluSp SINE Alu 1 298 -15 514 275 30 24 chr10 106985299 106985466 -33331299 - MIR SINE MIR -80 182 15 1757 145 0 4 chr10 106985558 106985807 -33330958 - AluJb SINE Alu -51 261 14 2358 104 0 16 chr10 106986233 106986551 -33330214 - AluSq SINE Alu 0 313 1 319 303 41 87 chr10 106986973 106987168 -33329597 - MIR SINE MIR -48 214 29 228 310 38 57 chr10 106987220 106987378 -33329387 - MIR SINE MIR -74 188 34 1681 137 24 73 chr10 106987601 106987929 -33328836 - AluJb SINE Alu 0 312 1 2331 99 13 0 chr10 106987939 106988242 -33328523 - AluSx SINE Alu -5 307 1 1596 175 35 111 chr10 106988288 106988746 -33328019 - MER63B DNA MER1_type -13 423 1 2293 174 40 11 chr10 106988915 106989362 -33327403 + MER66B LTR ERV1 27 486 0 343 167 53 105 chr10 106989825 106989939 -33326826 + MIR3 SINE MIR 48 155 -53 1909 156 3 3 chr10 106989940 106990228 -33326537 + AluJo SINE Alu 5 292 -20 1887 133 63 27 chr10 106990478 106990778 -33325987 - AluSx SINE Alu -1 311 1 466 321 30 12 chr10 106990938 106991106 -33325659 - MER5A DNA MER1_type -18 171 1 1680 174 30 16 chr10 106991273 106991440 -33325325 - AluJo SINE Alu -3 309 135 2543 64 0 0 chr10 106991440 106991738 -33325027 - AluY SINE Alu -13 298 1 1680 174 30 16 chr10 106991738 106991875 -33324890 - AluJo SINE Alu -177 135 1 2654 56 0 0 chr10 106992313 106992617 -33324148 - AluY SINE Alu -7 304 1 2250 115 0 6 chr10 106992907 106993220 -33323545 - AluY SINE Alu 0 311 1 754 274 12 80 chr10 106993221 106993246 -33323519 + L2 LINE L2 2519 2544 -770 1790 141 67 0 chr10 106993246 106993512 -33323253 + AluSx SINE Alu 1 289 -23 411 38 0 0 chr10 106993512 106993565 -33323200 + (CA)n Simple_repeat Simple_repeat 2 54 0 1790 141 67 0 chr10 106993565 106993581 -33323184 + AluSx SINE Alu 289 302 -10 754 274 12 80 chr10 106993581 106993760 -33323005 + L2 LINE L2 2544 2734 -580 1777 176 10 7 chr10 106993760 106994094 -33322671 + AluJb SINE Alu 1 335 0 2298 118 3 0 chr10 106994098 106994403 -33322362 + AluSp SINE Alu 1 306 -7 754 274 12 80 chr10 106994403 106994614 -33322151 + L2 LINE L2 2737 2912 -402 364 232 250 49 chr10 106994618 106994842 -33321923 + L2 LINE L2 3045 3313 0 22 0 0 0 chr10 106996406 106996428 -33320337 + AT_rich Low_complexity Low_complexity 1 22 0 2300 103 0 0 chr10 106996428 106996719 -33320046 - AluSg SINE Alu -19 291 1 2191 111 20 14 chr10 106997806 106998103 -33318662 - AluSp SINE Alu -14 299 1 1129 81 0 0 chr10 106998103 106998239 -33318526 - AluSq/x SINE Alu -177 136 1 229 326 51 0 chr10 106998251 106998349 -33318416 - L2 LINE L2 -20 3293 3191 403 260 147 0 chr10 106998773 106998923 -33317842 + MIR SINE MIR 90 261 -1 2292 96 7 0 chr10 107000523 107000826 -33315939 + AluY SINE Alu 1 305 -6 308 226 95 0 chr10 107002148 107002232 -33314533 - AluSc SINE Alu -4 295 204 5253 99 70 43 chr10 107002455 107003590 -33313175 - MER11A LTR ERVK 0 1266 1 19153 62 8 0 chr10 107003590 107006037 -33310728 - HERVK11 LTR ERVK 0 7953 5488 17358 75 4 20 chr10 107006033 107008406 -33308359 - HERVK11 LTR ERVK -5618 2335 1 * 3666 105 61 26 chr10 107008411 107009496 -33307269 - MER11A LTR ERVK -4 1232 1 2601 72 0 0 chr10 107010372 107010678 -33306087 + AluY SINE Alu 1 306 -5 2107 128 14 0 chr10 107011126 107011414 -33305351 + AluSx SINE Alu 1 292 -20 2337 146 26 119 chr10 107011832 107012246 -33304519 - MER66B LTR ERV1 0 486 35 237 33 0 0 chr10 107012246 107012276 -33304489 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2337 146 26 119 chr10 107012276 107012294 -33304471 - MER66B LTR ERV1 -451 35 110 1584 138 9 0 chr10 107012294 107012525 -33304240 - AluSq SINE Alu -80 233 1 2337 146 26 119 chr10 107012525 107012627 -33304138 - MER66B LTR ERV1 -375 111 1 1971 127 39 0 chr10 107013360 107013643 -33303122 - AluSx SINE Alu -18 294 1 252 186 0 0 chr10 107013649 107013692 -33303073 - FLAM SINE Alu -19 114 72 2018 154 3 0 chr10 107013793 107014104 -33302661 - AluJb SINE Alu 0 312 1 1938 218 31 71 chr10 107014131 107014749 -33302016 - MLT1E LTR MaLR 0 593 1 2192 183 38 101 chr10 107014802 107015021 -33301744 + L1ME1 LINE L1 5503 5734 -432 1316 174 112 28 chr10 107015021 107015308 -33301457 + AluJo SINE Alu 1 311 -1 2192 183 38 101 chr10 107015308 107016213 -33300552 + L1ME1 LINE L1 5734 6122 -44 732 108 0 128 chr10 107015670 107015699 -33301066 - FLAM_C SINE Alu -169 133 102 2264 92 0 0 chr10 107015699 107016017 -33300748 + AluSg SINE Alu 1 318 0 732 108 0 128 chr10 107016017 107016134 -33300631 - FLAM_C SINE Alu -200 102 5 357 145 17 198 chr10 107016134 107016231 -33300534 + L1MA10 LINE L1 6223 6280 -54 2355 76 3 3 chr10 107016231 107016519 -33300246 + AluSx SINE Alu 1 288 -24 357 145 17 198 chr10 107016519 107016546 -33300219 + L1MA10 LINE L1 6280 6310 -24 2416 84 0 0 chr10 107016754 107017051 -33299714 - AluSx SINE Alu -15 297 1 312 233 92 0 chr10 107017137 107017257 -33299508 - L1P LINE L1 -740 5411 5281 403 279 93 16 chr10 107017258 107017387 -33299378 + L2 LINE L2 3133 3271 -1 2198 109 0 0 chr10 107017391 107017709 -33299056 + AluSx SINE Alu 1 318 0 569 137 10 39 chr10 107017709 107017811 -33298954 - AluJo/FLAM SINE Alu -196 116 18 * 642 152 48 0 chr10 107017805 107017910 -33298855 - AluSq/x SINE Alu -202 111 2 363 213 59 3 chr10 107017971 107018085 -33298680 + L1MC4 LINE L1 1995 6983 -1339 333 290 137 0 chr10 107018086 107018217 -33298548 - MIR SINE MIR -78 184 36 734 164 0 15 chr10 107018243 107018377 -33298388 - FLAM_C SINE Alu -1 132 1 1370 76 0 61 chr10 107019008 107019206 -33297559 + AluSp SINE Alu 32 217 -96 471 89 89 0 chr10 107019207 107019342 -33297423 + (TA)n Simple_repeat Simple_repeat 1 147 0 192 279 58 29 chr10 107019396 107019500 -33297265 - MIR SINE MIR -1 261 155 2349 93 7 0 chr10 107019500 107019801 -33296964 - AluSg SINE Alu -6 304 2 690 233 108 43 chr10 107019884 107020095 -33296670 - L2 LINE L2 -4 3309 3074 2174 96 0 38 chr10 107020095 107020409 -33296356 - AluSx SINE Alu -10 302 1 690 233 108 43 chr10 107020409 107020476 -33296289 - L2 LINE L2 -239 3074 3013 878 121 23 15 chr10 107020617 107020749 -33296016 + FLAM_C SINE Alu 1 133 0 243 366 107 13 chr10 107021174 107021398 -33295367 + L2 LINE L2 2487 2731 -583 197 271 21 0 chr10 107021434 107021482 -33295283 + L2 LINE L2 3005 3053 -219 798 221 26 144 chr10 107021791 107022227 -33294538 + L1MC4a LINE L1 5509 5892 -1916 2023 145 0 7 chr10 107022227 107022524 -33294241 + AluJb SINE Alu 1 295 -17 798 221 26 144 chr10 107022524 107022539 -33294226 + L1MC4a LINE L1 5892 5907 -1901 204 67 0 0 chr10 107022539 107022569 -33294196 + (GA)n Simple_repeat Simple_repeat 2 31 0 317 239 112 46 chr10 107022569 107022714 -33294051 + L1MC4a LINE L1 5878 6041 -1767 2143 142 0 6 chr10 107022714 107023025 -33293740 + AluSx SINE Alu 1 309 -3 317 239 112 46 chr10 107023025 107023076 -33293689 + L1MC4a LINE L1 6041 6087 -1721 2308 98 16 0 chr10 107023480 107023785 -33292980 - AluSx SINE Alu -2 310 1 2186 122 10 3 chr10 107023906 107024210 -33292555 - AluSx SINE Alu -6 306 1 2161 123 0 3 chr10 107025479 107025779 -33290986 + AluSq SINE Alu 1 299 -14 2267 112 3 6 chr10 107025781 107026093 -33290672 + AluSx SINE Alu 1 311 -1 669 185 8 0 chr10 107027025 107027144 -33289621 + FLAM_C SINE Alu 13 132 -11 2654 51 0 3 chr10 107027400 107027711 -33289054 + AluSg SINE Alu 1 310 0 30 45 0 0 chr10 107028943 107028987 -33287778 + AT_rich Low_complexity Low_complexity 1 44 0 2306 81 0 7 chr10 107029760 107030068 -33286697 + AluSg SINE Alu 1 306 0 360 292 134 51 chr10 107030078 107030414 -33286351 + L1M4 LINE L1 3594 3957 -2189 465 287 153 0 chr10 107030477 107030634 -33286131 - MIR3 SINE MIR -5 203 23 221 353 103 29 chr10 107030711 107030915 -33285850 - L3 LINE CR1 -15 1562 1344 2504 58 3 0 chr10 107031050 107031344 -33285421 + AluY SINE Alu 1 295 -16 2348 89 10 3 chr10 107031646 107031949 -33284816 + AluSq SINE Alu 1 305 -8 1205 235 94 5 chr10 107032044 107032418 -33284347 + Charlie7 DNA MER1_type 1729 2135 -477 652 149 47 14 chr10 107032506 107032654 -33284111 + FRAM SINE Alu 1 152 -24 26 0 0 0 chr10 107032654 107032680 -33284085 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr10 107032738 107032761 -33284004 + AT_rich Low_complexity Low_complexity 1 23 0 698 62 82 0 chr10 107032768 107032865 -33283900 + U6 snRNA snRNA 1 105 -2 1511 131 5 5 chr10 107032887 107033109 -33283656 + AluJb SINE Alu 1 222 -90 27 0 0 0 chr10 107033127 107033154 -33283611 + AT_rich Low_complexity Low_complexity 1 27 0 1031 223 68 12 chr10 107033278 107033529 -33283236 + L1ME1 LINE L1 5897 6161 -5 716 190 44 0 chr10 107034737 107034895 -33281870 + FAM SINE Alu 2 166 -9 1883 144 4 0 chr10 107035310 107035588 -33281177 + AluSx SINE Alu 1 279 -33 183 42 0 0 chr10 107035588 107035612 -33281153 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 2441 80 0 3 chr10 107035612 107035924 -33280841 + AluY SINE Alu 1 311 0 1230 73 0 0 chr10 107035924 107036118 -33280647 + AluY SINE Alu 131 324 0 2162 117 0 7 chr10 107036225 107036532 -33280233 - AluSx SINE Alu -7 305 1 212 232 89 0 chr10 107036588 107036644 -33280121 - L2 LINE L2 -67 3205 3145 273 146 0 0 chr10 107036677 107036725 -33280040 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 1944 139 3 20 chr10 107037617 107037933 -33278832 - AluSx SINE Alu 0 312 1 2276 115 7 0 chr10 107038320 107038625 -33278140 + AluSp SINE Alu 1 307 -6 2412 95 0 0 chr10 107039542 107039846 -33276919 + AluSx SINE Alu 1 304 -8 590 205 16 8 chr10 107039853 107039975 -33276790 + FLAM_A SINE Alu 1 123 -10 2072 136 14 0 chr10 107039977 107040264 -33276501 - AluSg SINE Alu -19 291 1 1008 183 47 136 chr10 107040606 107040923 -33275842 - AluJo SINE Alu -12 290 2 422 339 9 4 chr10 107041470 107041646 -33275119 + MIR SINE MIR 22 196 -65 204 40 0 0 chr10 107041906 107041931 -33274834 + (A)n Simple_repeat Simple_repeat 1 25 0 674 234 0 0 chr10 107041938 107042062 -33274703 + FLAM_A SINE Alu 1 124 -9 2533 82 0 0 chr10 107042092 107042397 -33274368 - AluSg SINE Alu -5 305 1 2033 123 11 0 chr10 107043526 107043803 -33272962 - AluJb SINE Alu -32 280 1 2330 101 0 10 chr10 107043830 107044137 -33272628 + AluSx SINE Alu 1 304 -8 464 270 114 17 chr10 107044146 107044233 -33272532 - L1MC4 LINE L1 -26 8016 7939 186 103 0 0 chr10 107044233 107044262 -33272503 + (TA)n Simple_repeat Simple_repeat 2 30 0 464 270 114 17 chr10 107044262 107044385 -33272380 - L1MC4 LINE L1 -103 7939 7660 245 290 48 0 chr10 107044576 107044638 -33272127 + MIR SINE MIR 10 74 -188 349 333 24 8 chr10 107045841 107045967 -33270798 + MIR SINE MIR 59 186 -76 1605 154 38 60 chr10 107046070 107046283 -33270482 - AluJo SINE Alu 0 312 107 2553 63 0 0 chr10 107046283 107046585 -33270180 - AluY SINE Alu -9 302 1 1605 154 38 60 chr10 107046585 107046690 -33270075 - AluJo SINE Alu -205 107 1 24 0 0 0 chr10 107046730 107046754 -33270011 + AT_rich Low_complexity Low_complexity 1 24 0 842 181 13 0 chr10 107046757 107046906 -33269859 - FAM SINE Alu -12 173 23 2312 88 0 3 chr10 107046930 107047237 -33269528 - AluSx SINE Alu 0 306 1 24 77 0 0 chr10 107047398 107047450 -33269315 + AT_rich Low_complexity Low_complexity 1 52 0 2261 115 0 0 chr10 107047452 107047747 -33269018 - AluSx SINE Alu -17 295 1 1142 44 7 7 chr10 107047779 107047914 -33268851 + AluSq/x SINE Alu 3 137 -175 2329 65 14 0 chr10 107047916 107048192 -33268573 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr10 107048192 107048218 -33268547 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 24 0 0 0 chr10 107048912 107048936 -33267829 + AT_rich Low_complexity Low_complexity 1 24 0 1595 145 104 4 chr10 107049100 107049369 -33267396 - AluJo SINE Alu -16 296 1 316 215 118 42 chr10 107049477 107049621 -33267144 + L1ME4a LINE L1 5787 5941 -180 2112 87 28 18 chr10 107049621 107049907 -33266858 + AluSc SINE Alu 1 289 -20 1918 118 12 67 chr10 107051045 107051375 -33265390 - AluSx SINE Alu 0 312 1 1588 159 7 35 chr10 107051377 107051667 -33265098 - AluJo SINE Alu -14 298 17 600 197 77 0 chr10 107051736 107051853 -33264912 + FLAM_A SINE Alu 5 130 -3 29 0 0 0 chr10 107051982 107052011 -33264754 + AT_rich Low_complexity Low_complexity 1 29 0 1557 156 39 21 chr10 107052011 107052293 -33264472 - AluJo SINE Alu -25 287 1 261 0 0 0 chr10 107052304 107052333 -33264432 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1230 291 28 23 chr10 107052369 107052758 -33264007 + MLT1I LTR MaLR 19 409 0 25 0 0 0 chr10 107052859 107052884 -33263881 + AT_rich Low_complexity Low_complexity 1 25 0 2348 104 3 0 chr10 107052888 107053187 -33263578 - AluSx SINE Alu -12 300 1 594 153 41 0 chr10 107053267 107053365 -33263400 - U6 snRNA snRNA -5 102 1 2098 95 37 14 chr10 107053397 107053692 -33263073 + AluY SINE Alu 1 302 -9 643 271 75 19 chr10 107054189 107054403 -33262362 + MIR SINE MIR 37 262 0 1959 135 59 0 chr10 107054498 107054786 -33261979 + AluSx SINE Alu 1 305 -7 1228 187 0 5 chr10 107054937 107055135 -33261630 + AluJb SINE Alu 87 283 -29 288 0 0 0 chr10 107055148 107055180 -33261585 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 482 333 0 0 chr10 107055183 107055345 -33261420 + G-rich Low_complexity Low_complexity 1 162 0 322 148 16 57 chr10 107055345 107055467 -33261298 + GA-rich Low_complexity Low_complexity 5 121 0 598 225 26 26 chr10 107055819 107055970 -33260795 + MER5A DNA MER1_type 39 189 0 234 179 0 54 chr10 107056194 107056250 -33260515 + (TG)n Simple_repeat Simple_repeat 1 53 0 2229 123 0 0 chr10 107057952 107058252 -33258513 - AluSx SINE Alu -12 300 1 2120 114 14 0 chr10 107058573 107058863 -33257902 + AluSc SINE Alu 1 294 -15 2417 94 0 0 chr10 107059445 107059754 -33257011 + AluSg SINE Alu 1 309 -1 396 328 37 8 chr10 107060530 107060664 -33256101 - L2 LINE L2 -13 3259 3122 514 219 183 7 chr10 107061152 107061289 -33255476 - MER47A DNA MER2_type -204 162 2 1774 158 95 9 chr10 107061925 107062261 -33254504 - MER47A DNA MER2_type 0 366 2 1119 127 18 0 chr10 107062537 107062703 -33254062 - AluJb SINE Alu -18 294 126 200 288 38 25 chr10 107062704 107062784 -33253981 + MIR SINE MIR 58 138 -124 1123 111 0 0 chr10 107062819 107062963 -33253802 - AluSg/x SINE Alu -32 278 135 325 193 83 83 chr10 107063205 107063225 -33253540 + MIR SINE MIR 13 32 -230 1910 149 10 17 chr10 107063225 107063521 -33253244 + AluJb SINE Alu 1 294 -18 325 193 83 83 chr10 107063521 107063609 -33253156 + MIR SINE MIR 31 121 -141 1890 167 0 14 chr10 107063844 107064137 -33252628 - AluJo SINE Alu -23 289 1 2454 97 0 0 chr10 107064406 107064714 -33252051 + AluSp SINE Alu 6 313 0 977 88 0 22 chr10 107065643 107065779 -33250986 - FLAM_C SINE Alu 0 133 1 312 256 0 81 chr10 107065817 107065903 -33250862 - L2 LINE L2 -6 3307 3229 552 235 96 6 chr10 107065928 107066094 -33250671 + L1MEd LINE L1 6 186 -5933 1048 273 133 53 chr10 107066139 107066485 -33250280 + L1MEd LINE L1 283 600 -5519 2302 86 7 7 chr10 107066485 107066786 -33249979 + AluSg SINE Alu 1 301 -9 1048 273 133 53 chr10 107066786 107067198 -33249567 + L1MEd LINE L1 600 1102 -5017 2310 87 27 0 chr10 107067258 107067557 -33249208 + AluY SINE Alu 1 307 -4 846 284 108 35 chr10 107067634 107068004 -33248761 - L2 LINE L2 -113 3200 2804 2061 129 0 11 chr10 107068033 107068319 -33248446 + AluSx SINE Alu 1 283 -29 188 0 0 69 chr10 107068323 107068352 -33248413 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr10 107068427 107068448 -33248317 + AT_rich Low_complexity Low_complexity 1 21 0 2192 82 65 3 chr10 107068886 107069179 -33247586 + AluY SINE Alu 1 311 0 1249 110 12 0 chr10 107069179 107069342 -33247423 + AluSg/x SINE Alu 132 296 -14 762 314 20 16 chr10 107069353 107069605 -33247160 - MIR SINE MIR -3 259 7 202 348 87 26 chr10 107070478 107070593 -33246172 - L2 LINE L2 -5 3267 3146 2495 74 0 0 chr10 107071204 107071502 -33245263 - AluY SINE Alu -13 298 1 2102 110 62 0 chr10 107071932 107072223 -33244542 - AluSx SINE Alu -3 309 1 679 301 42 9 chr10 107072414 107072630 -33244135 - MIR SINE MIR -2 260 38 522 236 118 82 chr10 107072640 107072860 -33243905 - MIR SINE MIR -7 255 28 400 289 197 0 chr10 107072881 107073033 -33243732 + MER5A DNA MER1_type 8 189 0 238 306 0 44 chr10 107073103 107073286 -33243479 + C-rich Low_complexity Low_complexity 5 179 0 * 262 291 10 10 chr10 107073202 107073305 -33243460 + CT-rich Low_complexity Low_complexity 2 104 0 295 204 7 73 chr10 107073456 107073593 -33243172 + CT-rich Low_complexity Low_complexity 3 130 0 1506 140 9 91 chr10 107074299 107074628 -33242137 - AluSq SINE Alu -5 308 7 1614 153 0 12 chr10 107074827 107075082 -33241683 - AluJb SINE Alu -7 305 54 22 0 0 0 chr10 107075473 107075495 -33241270 + AT_rich Low_complexity Low_complexity 1 22 0 2268 103 3 0 chr10 107075495 107075811 -33240954 + AluSq SINE Alu 1 317 0 2369 90 3 3 chr10 107076919 107077219 -33239546 - AluSx SINE Alu -12 300 1 749 174 138 36 chr10 107078025 107078220 -33238545 + MER58C DNA MER1_type 1 215 0 1171 93 0 7 chr10 107078254 107078404 -33238361 + AluSq/x SINE Alu 3 151 -162 1553 163 35 11 chr10 107078507 107078574 -33238191 - L1MB7 LINE L1 -59 6125 6061 1525 163 98 4 chr10 107078574 107078838 -33237927 - AluJb SINE Alu -23 289 1 1553 163 35 11 chr10 107078838 107079086 -33237679 - L1MB7 LINE L1 -123 6061 5802 733 182 0 30 chr10 107079571 107079703 -33237062 - AluJ SINE Alu -17 295 168 1070 174 0 0 chr10 107079856 107080017 -33236748 - AluJ SINE Alu -147 165 5 2275 101 17 3 chr10 107080480 107080776 -33235989 - AluSg SINE Alu -10 300 1 1871 149 3 48 chr10 107080776 107081085 -33235680 - AluJb SINE Alu -17 295 1 229 286 20 41 chr10 107082225 107082323 -33234442 + G-rich Low_complexity Low_complexity 1 96 0 2449 150 20 0 chr10 107083756 107084155 -33232610 - L1MB5 LINE L1 -6 6168 5762 2404 99 7 0 chr10 107085538 107085840 -33230925 + AluSc SINE Alu 1 304 -5 2060 112 20 3 chr10 107086635 107086930 -33229835 - AluSx SINE Alu -12 300 1 1846 177 3 3 chr10 107087121 107087420 -33229345 - AluJb SINE Alu -13 299 1 336 264 201 25 chr10 107088166 107088325 -33228440 + MER5A DNA MER1_type 3 189 0 2362 86 0 16 chr10 107089239 107089543 -33227222 + AluY SINE Alu 1 299 -12 2120 123 10 19 chr10 107089553 107089862 -33226903 + AluSx SINE Alu 2 307 -5 865 165 0 0 chr10 107089865 107089998 -33226767 + FLAM_C SINE Alu 1 133 -10 2665 58 0 0 chr10 107090002 107090311 -33226454 + AluY SINE Alu 2 310 -1 1050 189 13 48 chr10 107090898 107091125 -33225640 - MER20 DNA MER1_type 0 219 1 243 0 0 0 chr10 107092487 107092514 -33224251 + (A)n Simple_repeat Simple_repeat 1 27 0 1821 143 21 18 chr10 107092561 107092841 -33223924 + AluSq SINE Alu 1 281 -32 310 286 93 13 chr10 107093208 107093388 -33223377 + MIR SINE MIR 5 199 -53 239 319 44 74 chr10 107094054 107094189 -33222576 + L2 LINE L2 3119 3249 -23 336 301 41 41 chr10 107094798 107094944 -33221821 + L2 LINE L2 2953 3098 -174 341 177 31 42 chr10 107095020 107095116 -33221649 + MER5A DNA MER1_type 8 102 -87 1548 140 0 18 chr10 107095128 107095357 -33221408 + AluSx SINE Alu 1 225 -87 344 203 14 0 chr10 107095523 107095592 -33221173 + FLAM SINE Alu 63 132 -1 643 101 0 0 chr10 107095849 107095938 -33220827 + AluSg1 SINE Alu 2 90 -219 255 250 97 0 chr10 107096158 107096230 -33220535 + MIR SINE MIR 92 170 -92 208 311 0 16 chr10 107096493 107096554 -33220211 - L3 LINE CR1 -4 1573 1514 244 266 170 11 chr10 107097033 107097127 -33219638 - MIR3 SINE MIR -85 123 15 2316 103 17 0 chr10 107097261 107097562 -33219203 + AluSx SINE Alu 1 306 -6 2022 125 0 14 chr10 107099982 107100270 -33216495 - AluJb SINE Alu -5 307 24 474 273 0 9 chr10 107101106 107101216 -33215549 - L2 LINE L2 0 3313 3205 180 179 0 0 chr10 107101234 107101273 -33215492 + T-rich Low_complexity Low_complexity 1 39 0 1202 145 23 72 chr10 107101298 107101519 -33215246 - AluJo SINE Alu -102 210 1 2247 138 0 0 chr10 107102255 107102566 -33214199 + AluJb SINE Alu 1 311 -1 2253 113 17 0 chr10 107102567 107102867 -33213898 + AluSx SINE Alu 1 305 -7 2374 69 10 0 chr10 107102867 107103157 -33213608 + AluY SINE Alu 1 293 -18 827 98 165 15 chr10 107103257 107103390 -33213375 - AluSx SINE Alu -159 153 1 27 0 0 0 chr10 107103400 107103427 -33213338 + AT_rich Low_complexity Low_complexity 1 27 0 715 258 52 0 chr10 107103464 107103658 -33213107 - AluJo SINE Alu -103 209 6 624 269 149 0 chr10 107103825 107104026 -33212739 - MIR SINE MIR -12 250 20 330 318 0 0 chr10 107105193 107105281 -33211484 - MIR SINE MIR -145 117 30 216 135 0 0 chr10 107105562 107105599 -33211166 + (A)n Simple_repeat Simple_repeat 1 37 0 1475 188 4 19 chr10 107105681 107105947 -33210818 + AluJo SINE Alu 30 291 -21 2495 67 0 3 chr10 107105950 107106247 -33210518 + AluY SINE Alu 1 296 -15 2821 13 0 13 chr10 107106249 107106565 -33210200 + AluYb8 SINE Alu 1 312 -6 1830 140 48 14 chr10 107106740 107107033 -33209732 + AluSx SINE Alu 2 304 -8 1136 172 0 0 chr10 107107550 107107724 -33209041 - FAM SINE Alu -1 174 1 1719 99 5 0 chr10 107108243 107108465 -33208300 - AluSg/x SINE Alu -5 307 85 1542 149 0 46 chr10 107108466 107108628 -33208137 - AluJb SINE Alu -19 293 146 2547 87 3 0 chr10 107108628 107108940 -33207825 - AluSp SINE Alu 0 313 1 1542 149 0 46 chr10 107108940 107109038 -33207727 - AluJb SINE Alu -166 146 45 333 350 50 19 chr10 107109375 107109535 -33207230 + L2 LINE L2 3107 3271 -1 1766 142 31 17 chr10 107109566 107109854 -33206911 + AluJb SINE Alu 1 292 -20 263 155 52 0 chr10 107110944 107110985 -33205780 + L1M3c LINE L1 1166 1212 -4929 2350 107 0 0 chr10 107110985 107111285 -33205480 + AluSx SINE Alu 1 300 -12 263 155 52 0 chr10 107111285 107111301 -33205464 + L1M3c LINE L1 1212 1226 -4915 201 393 0 0 chr10 107111543 107111627 -33205138 + MIR SINE MIR 48 131 -77 2067 136 3 13 chr10 107111868 107112176 -33204589 - AluJb SINE Alu -7 305 1 244 143 268 0 chr10 107112882 107112938 -33203827 - AluJ/FRAM SINE Alu 0 302 232 1711 188 7 17 chr10 107112946 107113238 -33203527 + AluJo SINE Alu 1 289 -23 976 105 0 0 chr10 107113250 107113383 -33203382 + AluSq/x SINE Alu 1 133 -179 1692 142 0 4 chr10 107113386 107113654 -33203111 + AluY SINE Alu 44 310 -1 2195 122 0 0 chr10 107113659 107113971 -33202794 + AluSx SINE Alu 1 312 0 1194 113 18 91 chr10 107113977 107114198 -33202567 + AluSg/x SINE Alu 86 290 -22 1668 73 9 0 chr10 107114424 107114644 -33202121 + AluSp SINE Alu 1 222 -91 479 210 8 8 chr10 107114805 107114924 -33201841 + AluSp/q SINE Alu 194 312 -1 214 252 47 75 chr10 107114925 107115032 -33201733 - MIR SINE MIR -73 135 32 4761 142 29 28 chr10 107115100 107115459 -33201306 + L1MB7 LINE L1 5320 5677 -507 921 182 11 17 chr10 107115459 107115635 -33201130 + FAM SINE Alu 1 175 0 4761 142 29 28 chr10 107115635 107115757 -33201008 + L1MB7 LINE L1 5677 5797 -387 4059 164 54 61 chr10 107115757 107116718 -33200047 + LTR13 LTR ERVK 1 954 0 4761 142 29 28 chr10 107116718 107117099 -33199666 + L1MB7 LINE L1 5797 6184 0 2256 88 3 0 chr10 107117104 107117401 -33199364 + AluSx SINE Alu 1 298 -14 1764 163 7 0 chr10 107117413 107117719 -33199046 + AluJb SINE Alu 1 308 -4 791 153 30 8 chr10 107117969 107118100 -33198665 + AluJo SINE Alu 2 135 -177 1657 182 3 7 chr10 107118101 107118387 -33198378 + AluSx SINE Alu 1 285 -27 789 129 0 0 chr10 107118387 107118503 -33198262 - AluJo/FLAM SINE Alu -186 116 1 507 249 153 33 chr10 107118511 107118752 -33198013 + L1ME LINE L1 5532 5801 -320 2046 104 4 0 chr10 107118879 107119159 -33197606 - AluSg SINE Alu -29 281 1 2098 13 0 0 chr10 107119290 107119525 -33197240 - AluYa5 SINE Alu -76 235 1 202 71 48 48 chr10 107119675 107119759 -33197006 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 343 146 0 14 chr10 107119762 107119825 -33196940 - Alu SINE Alu -264 44 1 1580 145 8 0 chr10 107119838 107120080 -33196685 + AluSx SINE Alu 1 244 -68 526 246 127 7 chr10 107120081 107120223 -33196542 - L2 LINE L2 -613 2701 2543 1801 151 3 7 chr10 107120227 107120525 -33196240 + AluJo SINE Alu 1 297 -15 282 157 59 0 chr10 107120525 107120576 -33196189 + Tigger3(Golem) DNA MER2_type 69 122 -2907 1511 142 26 0 chr10 107120588 107120821 -33195944 + Tigger3(Golem) DNA MER2_type 2789 3027 -2 695 227 127 32 chr10 107120828 107121048 -33195717 + L2 LINE L2 2287 2527 -787 298 241 161 0 chr10 107121036 107121123 -33195642 + L2 LINE L2 3123 3223 -90 * 2194 83 0 3 chr10 107121142 107121432 -33195333 + AluSg1 SINE Alu 1 289 -20 1106 170 34 0 chr10 107121451 107121481 -33195284 + AluJo SINE Alu 90 118 -194 279 0 0 0 chr10 107121481 107121512 -33195253 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1106 170 34 0 chr10 107121512 107121687 -33195078 + AluJo SINE Alu 118 302 -10 2036 102 14 0 chr10 107121697 107121982 -33194783 + AluSg SINE Alu 1 289 -21 347 120 0 0 chr10 107123155 107123205 -33193560 + AluYa8 SINE Alu 145 194 -106 854 179 145 6 chr10 107124135 107124314 -33192451 - MER20 DNA MER1_type 0 219 16 775 206 153 0 chr10 107124488 107124677 -33192088 - MIR SINE MIR -44 218 1 1807 156 33 0 chr10 107124782 107125084 -33191681 + AluJb SINE Alu 1 312 0 2081 118 0 3 chr10 107125093 107125389 -33191376 + AluSx SINE Alu 5 299 -13 1337 174 26 51 chr10 107125391 107125590 -33191175 + L1MB7 LINE L1 5867 6057 -127 1862 105 87 0 chr10 107125590 107125867 -33190898 + AluY SINE Alu 1 301 -10 1337 174 26 51 chr10 107125867 107125978 -33190787 + L1MB7 LINE L1 6057 6169 -15 1770 112 50 0 chr10 107125978 107126237 -33190528 - AluSx SINE Alu -13 299 28 1235 184 59 16 chr10 107126554 107126809 -33189956 - AluJo SINE Alu -46 266 1 2354 92 0 0 chr10 107126816 107127122 -33189643 - AluSx SINE Alu -6 306 1 732 271 75 19 chr10 107127217 107127431 -33189334 - MIR SINE MIR 0 262 37 1977 95 37 14 chr10 107127928 107128223 -33188542 - AluY SINE Alu -9 302 1 596 153 41 0 chr10 107128255 107128353 -33188412 + U6 snRNA snRNA 1 102 -5 2218 104 3 0 chr10 107128433 107128732 -33188033 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr10 107128736 107128761 -33188004 + AT_rich Low_complexity Low_complexity 1 25 0 1238 293 28 23 chr10 107128862 107129251 -33187514 - MLT1I LTR MaLR 0 409 19 261 0 0 0 chr10 107129287 107129316 -33187449 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1445 156 39 21 chr10 107129327 107129609 -33187156 + AluJo SINE Alu 1 287 -25 29 0 0 0 chr10 107129609 107129638 -33187127 + AT_rich Low_complexity Low_complexity 1 29 0 602 197 77 0 chr10 107129767 107129884 -33186881 - FLAM_A SINE Alu -3 130 5 1493 166 7 28 chr10 107129953 107130243 -33186522 + AluJo SINE Alu 17 300 -12 1796 118 12 67 chr10 107130245 107130575 -33186190 + AluSx SINE Alu 1 312 0 421 210 156 36 chr10 107131691 107131713 -33185052 - L1ME4a LINE L1 -148 5973 5955 1975 91 28 18 chr10 107131713 107131999 -33184766 - AluSc SINE Alu -20 289 1 421 210 156 36 chr10 107131999 107132143 -33184622 - L1ME4a LINE L1 -166 5955 5787 1488 145 104 4 chr10 107132251 107132520 -33184245 + AluJo SINE Alu 1 296 -16 24 0 0 0 chr10 107132684 107132708 -33184057 + AT_rich Low_complexity Low_complexity 1 24 0 213 39 0 0 chr10 107133402 107133428 -33183337 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1872 127 14 0 chr10 107133428 107133704 -33183061 - AluSx SINE Alu -32 280 1 282 163 20 0 chr10 107133724 107133773 -33182992 + AluSp SINE Alu 120 169 -134 1991 86 11 4 chr10 107133778 107134056 -33182709 + AluSx SINE Alu 11 290 -22 388 113 0 32 chr10 107138767 107138829 -33177936 - MIR SINE MIR -1 261 202 1878 154 0 0 chr10 107138859 107139157 -33177608 + AluSx SINE Alu 5 302 -10 420 134 0 61 chr10 107139458 107139540 -33177225 - AluS SINE Alu -235 78 2 379 155 0 0 chr10 107139574 107139632 -33177133 + MIR SINE MIR 205 262 0 353 190 26 26 chr10 107139684 107139800 -33176965 + GA-rich Low_complexity Low_complexity 3 118 0 2312 93 0 0 chr10 107139803 107140105 -33176660 + AluSp SINE Alu 5 306 -7 881 133 6 22 chr10 107140135 107140315 -33176450 + (GGAA)n Simple_repeat Simple_repeat 1 177 0 2001 102 39 3 chr10 107141004 107141287 -33175478 + AluSx SINE Alu 1 293 -19 2100 91 14 0 chr10 107141288 107141564 -33175201 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr10 107141564 107141590 -33175175 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 24 0 0 0 chr10 107142284 107142308 -33174457 + AT_rich Low_complexity Low_complexity 1 24 0 1466 145 104 4 chr10 107142472 107142741 -33174024 - AluJo SINE Alu -16 296 1 207 338 20 13 chr10 107142892 107143043 -33173722 + GA-rich Low_complexity Low_complexity 3 154 0 906 112 0 14 chr10 107143407 107143550 -33173215 + AluSg/x SINE Alu 166 306 -6 2022 98 27 114 chr10 107143591 107143781 -33172984 - L1MA8 LINE L1 -3 6288 6156 2167 108 16 3 chr10 107143781 107144087 -33172678 - AluSx SINE Alu -2 310 1 2022 98 27 114 chr10 107144087 107144336 -33172429 - L1MA8 LINE L1 -135 6156 5887 2121 111 0 0 chr10 107144361 107144659 -33172106 - AluSq SINE Alu -15 298 1 2682 154 22 36 chr10 107144664 107145132 -33171633 - L1MA4 LINE L1 -4 6296 5823 216 0 0 0 chr10 107145132 107145156 -33171609 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1921 83 3 90 chr10 107145156 107145329 -33171436 - AluSx SINE Alu -27 285 149 2831 0 0 0 chr10 107145329 107145640 -33171125 - AluYa5 SINE Alu 0 311 1 1921 83 3 90 chr10 107145640 107145778 -33170987 - AluSx SINE Alu -163 149 1 2682 154 22 36 chr10 107145778 107145859 -33170906 - L1MA4 LINE L1 -475 5825 5754 4118 163 49 106 chr10 107145859 107146137 -33170628 - L1 LINE L1 -2871 4694 4402 2149 86 24 7 chr10 107146137 107146429 -33170336 - AluSg SINE Alu -13 297 1 1565 155 41 0 chr10 107146430 107146701 -33170064 - AluJb SINE Alu -3 309 28 4118 163 49 106 chr10 107146701 107147593 -33169172 - L1 LINE L1 -3162 4403 3589 450 197 56 42 chr10 107148030 107148100 -33168665 - L1 LINE L1 -3960 3605 3537 3171 159 9 30 chr10 107148100 107148225 -33168540 - L1MA4 LINE L1 -4 6296 6170 186 43 0 0 chr10 107148225 107148248 -33168517 + (TTTTC)n Simple_repeat Simple_repeat 5 27 0 2148 95 3 0 chr10 107148249 107148532 -33168233 - AluSq SINE Alu -29 284 1 3171 159 9 30 chr10 107148532 107148663 -33168102 - L1MA4 LINE L1 -130 6170 6038 279 0 0 0 chr10 107148663 107148694 -33168071 + (TA)n Simple_repeat Simple_repeat 1 31 0 2338 59 0 33 chr10 107148694 107149001 -33167764 - AluY SINE Alu -14 297 1 3171 159 9 30 chr10 107149001 107149395 -33167370 - L1MA4 LINE L1 -260 6040 5656 450 197 56 42 chr10 107149395 107149466 -33167299 - L1 LINE L1 -4028 3537 3462 2023 108 0 14 chr10 107149502 107149789 -33166976 - AluSg SINE Alu -27 283 1 2352 63 0 31 chr10 107149796 107150113 -33166652 - AluY SINE Alu -4 307 1 1063 71 0 7 chr10 107150113 107150253 -33166512 - L1MA4 LINE L1 -639 5661 5523 2163 99 0 7 chr10 107150522 107150824 -33165941 - AluSx SINE Alu -12 300 1 1939 156 14 23 chr10 107150825 107151171 -33165594 - MER50 LTR ERV1 -391 343 1 6051 116 26 35 chr10 107151171 107151477 -33165288 + MER4B-int LTR ERV1 5325 5632 -1126 1827 160 6 10 chr10 107151477 107151790 -33164975 + AluJb SINE Alu 1 312 0 6051 116 26 35 chr10 107151790 107152499 -33164266 + MER4B-int LTR ERV1 5632 6330 -428 1882 99 7 38 chr10 107152505 107152843 -33163922 + AluSx SINE Alu 1 329 0 2303 112 13 107 chr10 107152902 107153150 -33163615 + MER4B-int LTR ERV1 6365 6635 -484 1810 134 0 14 chr10 107153150 107153297 -33163468 - AluSx SINE Alu -32 280 137 2184 109 0 16 chr10 107153297 107153610 -33163155 - AluSg SINE Alu -2 308 1 1810 134 0 14 chr10 107153610 107153746 -33163019 - AluSx SINE Alu -175 137 1 2303 112 13 107 chr10 107153746 107153956 -33162809 + MER4B-int LTR ERV1 6635 7119 0 2359 78 3 0 chr10 107153956 107154265 -33162500 + AluSg SINE Alu 1 310 0 3311 123 8 73 chr10 107154268 107154872 -33161893 + MER4B LTR ERV1 10 574 -36 1403 112 4 42 chr10 107154904 107155008 -33161757 - L1M4c LINE L1 -4211 2173 2067 2072 106 0 16 chr10 107155008 107155311 -33161454 - AluSx SINE Alu -12 300 3 1403 112 4 42 chr10 107155311 107155465 -33161300 - L1M4c LINE L1 -4317 2067 1925 288 113 0 0 chr10 107155514 107155567 -33161198 + AluSp/q SINE Alu 251 303 0 2316 88 0 0 chr10 107155591 107155888 -33160877 - AluSp SINE Alu -16 297 1 1747 142 0 4 chr10 107155888 107156163 -33160602 + AluSx SINE Alu 27 300 -12 2273 61 3 14 chr10 107156339 107156636 -33160129 + AluSg1 SINE Alu 1 294 -15 2664 20 0 3 chr10 107156919 107157225 -33159540 + AluY SINE Alu 6 310 -1 30 45 0 0 chr10 107158457 107158501 -33158264 + AT_rich Low_complexity Low_complexity 1 44 0 708 298 200 54 chr10 107158624 107159275 -33157490 + L1M4 LINE L1 2813 3368 -2778 2064 85 11 7 chr10 107159275 107159580 -33157185 + AluSg SINE Alu 1 306 0 708 298 200 54 chr10 107159580 107159926 -33156839 + L1M4 LINE L1 3368 3957 -2189 525 287 153 0 chr10 107159989 107160146 -33156619 - MIR3 SINE MIR -5 203 23 297 338 101 36 chr10 107160208 107160427 -33156338 - L3 LINE CR1 -1 1576 1344 2249 97 0 0 chr10 107160647 107160947 -33155818 - AluSx SINE Alu -12 300 1 2154 115 7 0 chr10 107161864 107162169 -33154596 - AluSp SINE Alu -6 307 1 1825 139 3 20 chr10 107162556 107162872 -33153893 + AluSx SINE Alu 1 312 0 273 146 0 0 chr10 107163764 107163812 -33152953 + (TTCC)n Simple_repeat Simple_repeat 2 49 0 232 232 89 0 chr10 107163845 107163901 -33152864 + L2 LINE L2 3145 3205 -67 1940 119 0 7 chr10 107163957 107164250 -33152515 + AluSx SINE Alu 1 291 -21 1161 73 0 0 chr10 107164368 107164562 -33152203 - AluY SINE Alu 0 324 131 2312 80 0 3 chr10 107164562 107164874 -33151891 - AluY SINE Alu 0 311 1 183 42 0 0 chr10 107164874 107164898 -33151867 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1768 144 4 0 chr10 107164898 107165176 -33151589 - AluSx SINE Alu -33 279 1 728 190 44 0 chr10 107165591 107165749 -33151016 - FAM SINE Alu -9 166 2 1034 223 68 12 chr10 107166957 107167208 -33149557 - L1ME1 LINE L1 -5 6161 5897 27 0 0 0 chr10 107167332 107167359 -33149406 + AT_rich Low_complexity Low_complexity 1 27 0 1419 131 5 5 chr10 107167377 107167599 -33149166 - AluJb SINE Alu -90 222 1 698 62 82 0 chr10 107167621 107167718 -33149047 - U6 snRNA snRNA -2 105 1 23 0 0 0 chr10 107167725 107167748 -33149017 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 107167806 107167832 -33148933 + AT_rich Low_complexity Low_complexity 1 26 0 664 149 47 14 chr10 107167832 107167980 -33148785 - AluJo SINE Alu -24 288 136 1176 235 94 5 chr10 107168068 107168442 -33148323 - Charlie7 DNA MER1_type -477 2135 1729 2208 89 10 3 chr10 107168537 107168839 -33147926 - AluSq SINE Alu -9 304 1 2329 68 3 0 chr10 107169141 107169435 -33147330 - AluY SINE Alu -16 295 1 818 148 0 22 chr10 107169437 107169572 -33147193 - AluJo SINE Alu -170 132 1 2492 56 0 0 chr10 107170010 107170314 -33146451 - AluY SINE Alu -7 304 1 1600 103 25 0 chr10 107170604 107170846 -33145919 - AluY SINE Alu 0 311 64 577 171 57 9 chr10 107171119 107171224 -33145541 - AluSq/x SINE Alu -202 111 2 423 219 75 2 chr10 107171258 107171370 -33145395 + L1MC4 LINE L1 1958 6983 -1339 371 337 0 0 chr10 107171279 107171374 -33145391 - L1MC4 LINE L1 -1334 6708 6614 * 386 303 118 7 chr10 107171379 107171531 -33145234 - MIR SINE MIR -58 204 36 744 164 0 15 chr10 107171557 107171691 -33145074 - FLAM_C SINE Alu -1 132 1 1286 76 0 61 chr10 107172322 107172520 -33144245 + AluSp SINE Alu 32 217 -96 471 89 89 0 chr10 107172521 107172656 -33144109 + (TA)n Simple_repeat Simple_repeat 2 148 0 232 279 58 29 chr10 107172710 107172814 -33143951 - MIR SINE MIR -1 261 155 2221 93 7 0 chr10 107172814 107173115 -33143650 - AluSg SINE Alu -6 304 2 803 233 108 43 chr10 107173198 107173409 -33143356 - L2 LINE L2 -4 3309 3074 2049 96 0 38 chr10 107173409 107173723 -33143042 - AluSx SINE Alu -10 302 1 803 233 108 43 chr10 107173723 107173790 -33142975 - L2 LINE L2 -239 3074 3013 885 121 23 15 chr10 107173931 107174063 -33142702 + FLAM_C SINE Alu 1 133 0 318 366 107 13 chr10 107174488 107174712 -33142053 + L2 LINE L2 2487 2731 -583 212 271 21 0 chr10 107174748 107174796 -33141969 + L2 LINE L2 3005 3053 -219 194 296 0 0 chr10 107174959 107175003 -33141762 + L2 LINE L2 3270 3313 0 799 221 26 144 chr10 107175105 107175541 -33141224 + L1MC4a LINE L1 5509 5892 -1916 1899 145 0 7 chr10 107175541 107175838 -33140927 + AluJb SINE Alu 1 295 -17 799 221 26 144 chr10 107175838 107175853 -33140912 + L1MC4a LINE L1 5892 5907 -1901 204 67 0 0 chr10 107175853 107175883 -33140882 + (GA)n Simple_repeat Simple_repeat 2 31 0 308 239 112 46 chr10 107175883 107176028 -33140737 + L1MC4a LINE L1 5878 6041 -1767 2022 148 0 0 chr10 107176028 107176339 -33140426 + AluSx SINE Alu 1 311 -1 308 239 112 46 chr10 107176339 107176390 -33140375 + L1MC4a LINE L1 6041 6087 -1721 2180 98 16 0 chr10 107176794 107177099 -33139666 - AluSx SINE Alu -2 310 1 2059 122 10 3 chr10 107177220 107177524 -33139241 - AluSx SINE Alu -6 306 1 189 320 206 0 chr10 107178452 107178549 -33138216 + L2 LINE L2 3153 3269 -3 2039 123 0 3 chr10 107178793 107179093 -33137672 + AluSq SINE Alu 1 299 -14 2124 115 3 6 chr10 107179095 107179407 -33137358 + AluSx SINE Alu 1 311 -1 671 185 8 0 chr10 107180339 107180458 -33136307 + FLAM_C SINE Alu 13 132 -11 2319 75 0 0 chr10 107180714 107181019 -33135746 + AluY SINE Alu 1 305 -6 226 50 0 50 chr10 107181030 107181070 -33135695 + Alu SINE Alu 96 133 0 2062 110 0 17 chr10 107181692 107181993 -33134772 - AluSx SINE Alu -16 296 1 1588 202 0 3 chr10 107181995 107182292 -33134473 - AluSx SINE Alu -16 296 1 559 236 153 25 chr10 107182316 107182519 -33134246 - MIR SINE MIR -28 234 6 1728 151 33 10 chr10 107182545 107182850 -33133915 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 107182867 107182888 -33133877 + AT_rich Low_complexity Low_complexity 1 21 0 7543 42 7 0 chr10 107183266 107184306 -33132459 + L1P2 LINE L1 4443 5491 -663 943 99 23 0 chr10 107184306 107184437 -33132328 + AluSg SINE Alu 1 134 -176 2378 59 0 7 chr10 107184437 107184740 -33132025 + AluY SINE Alu 1 301 -10 5445 47 0 21 chr10 107184740 107185417 -33131348 + L1PA6 LINE L1 5481 6143 -11 22 0 0 0 chr10 107185417 107185439 -33131326 + AT_rich Low_complexity Low_complexity 1 22 0 2331 74 0 13 chr10 107185451 107185761 -33131004 + AluSx SINE Alu 1 306 -6 2348 74 3 0 chr10 107186369 107186667 -33130098 - AluSp SINE Alu -14 299 1 2295 97 7 0 chr10 107186891 107187201 -33129564 - AluSx SINE Alu 0 312 1 1740 139 54 0 chr10 107187368 107187663 -33129102 - AluJb SINE Alu -1 311 1 397 313 9 26 chr10 107187890 107188005 -33128760 + MIR SINE MIR 19 131 -131 850 220 6 6 chr10 107188005 107188178 -33128587 - FRAM SINE Alu -9 167 1 430 250 14 64 chr10 107188178 107188202 -33128563 + MIR SINE MIR 127 151 -111 2190 89 0 0 chr10 107188202 107188521 -33128244 + AluY SINE Alu 1 319 0 430 250 14 64 chr10 107188521 107188635 -33128130 + MIR SINE MIR 151 259 -3 335 252 111 59 chr10 107188879 107189014 -33127751 - L1ME4a LINE L1 -86 6035 5894 966 212 0 13 chr10 107189038 107189264 -33127501 - AluJo SINE Alu -1 311 89 477 138 0 0 chr10 107189264 107189329 -33127436 - AluSg/x SINE Alu -59 250 186 1928 108 58 0 chr10 107189329 107189607 -33127158 - AluSq SINE Alu -17 296 3 834 130 0 8 chr10 107190210 107190333 -33126432 + FLAM_C SINE Alu 1 122 -11 27 0 0 0 chr10 107190334 107190361 -33126404 + AT_rich Low_complexity Low_complexity 1 27 0 314 325 80 25 chr10 107190424 107190546 -33126219 + L1ME LINE L1 5370 5484 -678 1450 78 22 30 chr10 107190546 107190777 -33125988 + L1PA10 LINE L1 5940 6168 0 314 325 80 25 chr10 107190777 107191067 -33125698 + L1ME LINE L1 5484 5817 -345 387 0 0 0 chr10 107191122 107191165 -33125600 + (TG)n Simple_repeat Simple_repeat 2 44 0 1942 149 0 0 chr10 107192660 107192962 -33123803 - AluSx SINE Alu -10 302 1 434 238 184 12 chr10 107193100 107193222 -33123543 + MIR SINE MIR 63 223 -39 1358 188 15 100 chr10 107193222 107193621 -33123144 + MLT1A1 LTR MaLR 1 365 0 434 238 184 12 chr10 107193621 107193666 -33123099 + MIR SINE MIR 223 259 -3 1854 114 14 4 chr10 107194782 107195063 -33121702 + AluSx SINE Alu 1 284 -28 185 138 0 0 chr10 107195121 107195150 -33121615 - L2 LINE L2 -13 3300 3272 1038 218 4 24 chr10 107195438 107195686 -33121079 - AluJo SINE Alu -69 243 1 1947 217 38 36 chr10 107195707 107196160 -33120605 - L1ME1 LINE L1 -4 6162 5706 2011 105 3 0 chr10 107196160 107196445 -33120320 + AluSx SINE Alu 1 286 -26 1947 217 38 36 chr10 107196445 107196522 -33120243 - L1ME1 LINE L1 -460 5706 5631 1962 132 6 3 chr10 107196727 107197038 -33119727 + AluSx SINE Alu 1 312 0 1790 128 0 78 chr10 107197518 107197837 -33118928 + AluSx SINE Alu 1 294 -18 266 85 0 43 chr10 107197963 107198003 -33118762 + AluJo/FLAM SINE Alu 90 124 -178 2304 103 0 0 chr10 107198003 107198313 -33118452 - AluSg SINE Alu 0 310 1 24 0 0 0 chr10 107198319 107198343 -33118422 + AT_rich Low_complexity Low_complexity 1 24 0 301 169 85 0 chr10 107198618 107198677 -33118088 - L2 LINE L2 -1 3312 3249 595 149 0 0 chr10 107198890 107198977 -33117788 + FRAM SINE Alu 77 163 -13 749 186 0 0 chr10 107199430 107199548 -33117217 - FLAM_A SINE Alu -13 129 12 458 273 7 40 chr10 107199625 107199775 -33116990 + MIR3 SINE MIR 36 180 -28 784 223 84 73 chr10 107199815 107199893 -33116872 + MER102a DNA MER1_type 54 130 -1287 2247 80 30 0 chr10 107199893 107200192 -33116573 + AluSg SINE Alu 1 308 -2 234 0 0 0 chr10 107200192 107200218 -33116547 + (TA)n Simple_repeat Simple_repeat 2 27 0 784 223 84 73 chr10 107200218 107200411 -33116354 + MER102a DNA MER1_type 129 329 -1 1795 153 0 3 chr10 107201160 107201460 -33115305 - AluJo SINE Alu -13 299 1 2117 130 0 0 chr10 107201628 107201927 -33114838 + AluSx SINE Alu 5 303 -9 256 256 8 77 chr10 107202054 107202098 -33114667 - MER94 DNA DNA -20 114 69 2117 114 0 0 chr10 107202098 107202395 -33114370 - AluSx SINE Alu -15 297 1 256 256 8 77 chr10 107202395 107202467 -33114298 - MER94 DNA DNA -65 69 6 2039 109 20 3 chr10 107203179 107203483 -33113282 - AluSg SINE Alu -1 309 1 996 177 119 108 chr10 107203512 107203671 -33113094 + MLT1B LTR MaLR 7 163 -227 2406 63 0 19 chr10 107203671 107203988 -33112777 + AluY SINE Alu 1 311 0 996 177 119 108 chr10 107203988 107204172 -33112593 + MLT1B LTR MaLR 163 354 -36 1897 114 3 49 chr10 107204177 107204502 -33112263 - AluSx SINE Alu -2 310 1 2742 96 33 8 chr10 107204503 107204897 -33111868 + MLT2A1 LTR ERVL 1 404 -40 215 39 0 154 chr10 107204905 107204983 -33111782 + (TA)n Simple_repeat Simple_repeat 1 66 0 348 163 0 64 chr10 107205007 107205148 -33111617 + (TA)n Simple_repeat Simple_repeat 1 132 0 284 82 122 0 chr10 107205151 107205200 -33111565 + MLT2A1 LTR ERVL 390 444 0 246 208 0 0 chr10 107205200 107205244 -33111521 + MLT1B LTR MaLR 331 374 0 25 0 0 0 chr10 107205667 107205692 -33111073 + AT_rich Low_complexity Low_complexity 1 25 0 1997 111 14 0 chr10 107206852 107207140 -33109625 - AluSx SINE Alu -20 292 1 1883 129 20 13 chr10 107207141 107207444 -33109321 - AluJo SINE Alu -7 305 1 914 175 0 35 chr10 107207484 107207655 -33109110 + FRAM SINE Alu 1 164 -12 2129 96 6 37 chr10 107208265 107208588 -33108177 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 107208757 107208778 -33107987 + AT_rich Low_complexity Low_complexity 1 21 0 1495 143 71 15 chr10 107209354 107209620 -33107145 + AluJb SINE Alu 1 281 -31 1919 126 0 39 chr10 107209658 107209967 -33106798 + AluSx SINE Alu 1 297 -15 430 79 26 0 chr10 107209967 107210043 -33106722 + (TA)n Simple_repeat Simple_repeat 2 79 0 1057 269 84 41 chr10 107210048 107210668 -33106097 - L2 LINE L2 -48 3265 2607 2235 44 40 10 chr10 107210797 107211095 -33105670 - AluY SINE Alu -4 307 1 207 108 27 0 chr10 107212541 107212578 -33104187 + (CTG)n Simple_repeat Simple_repeat 3 40 0 23 54 0 0 chr10 107212789 107212826 -33103939 + GC_rich Low_complexity Low_complexity 1 37 0 1880 157 13 3 chr10 107216582 107216888 -33099877 + AluJb SINE Alu 1 309 -3 332 141 0 78 chr10 107217047 107217111 -33099654 - FLAM SINE Alu -1 132 76 543 296 108 9 chr10 107217224 107217437 -33099328 - MIR SINE MIR -27 235 2 753 144 0 89 chr10 107218547 107218693 -33098072 - FLAM_C SINE Alu 0 133 1 192 128 43 85 chr10 107218853 107218900 -33097865 - MIR3 SINE MIR -13 195 151 2420 96 3 0 chr10 107218938 107219250 -33097515 + AluSp SINE Alu 1 313 0 307 263 46 72 chr10 107219393 107219545 -33097220 - MIR3 SINE MIR -49 159 12 24 32 0 0 chr10 107219735 107219766 -33096999 + AT_rich Low_complexity Low_complexity 1 31 0 976 175 0 23 chr10 107220466 107220637 -33096128 - AluJb SINE Alu -12 300 134 2020 141 0 10 chr10 107220637 107220943 -33095822 - AluSx SINE Alu -9 303 1 1779 134 42 18 chr10 107221402 107221686 -33095079 + AluSx SINE Alu 1 291 -21 330 284 85 11 chr10 107221955 107222131 -33094634 + MIR SINE MIR 73 261 -1 1332 160 148 65 chr10 107222160 107222228 -33094537 - MLT1A1 LTR MaLR 0 365 304 2225 94 20 3 chr10 107222228 107222526 -33094239 + AluSq SINE Alu 1 303 -10 1332 160 148 65 chr10 107222526 107222794 -33093971 - MLT1A1 LTR MaLR -61 304 1 2270 101 3 0 chr10 107222901 107223197 -33093568 + AluSx SINE Alu 2 298 -14 856 168 6 95 chr10 107223207 107223386 -33093379 + FRAM SINE Alu 1 163 -13 475 123 19 123 chr10 107223614 107223720 -33093045 - L1M4 LINE L1 -410 5774 5680 2758 141 56 10 chr10 107224453 107224934 -33091831 - L1MB7 LINE L1 0 6184 5682 2290 90 10 3 chr10 107225267 107225578 -33091187 - AluSp SINE Alu 0 313 1 5620 151 30 30 chr10 107225579 107226131 -33090634 - L1MB7 LINE L1 -509 5675 5125 836 115 7 58 chr10 107226131 107226270 -33090495 - FLAM_C SINE Alu 0 133 2 5620 151 30 30 chr10 107226270 107226559 -33090206 - L1MB7 LINE L1 -1059 5125 4838 2264 110 3 0 chr10 107226559 107226860 -33089905 + AluSx SINE Alu 3 304 -8 5620 151 30 30 chr10 107226860 107227420 -33089345 - L1MB7 LINE L1 -1346 4838 4276 1544 183 10 33 chr10 107227759 107228060 -33088705 - AluJo SINE Alu -15 297 4 2396 92 0 19 chr10 107228185 107228502 -33088263 - AluSx SINE Alu -1 311 1 837 170 6 42 chr10 107228618 107228783 -33087982 + FRAM SINE Alu 1 158 -18 2478 82 0 0 chr10 107228800 107229106 -33087659 + AluSx SINE Alu 1 306 -6 1455 180 58 14 chr10 107229113 107229391 -33087374 + AluJo SINE Alu 1 290 -22 1483 189 3 39 chr10 107229529 107229841 -33086924 - AluJo SINE Alu -11 301 1 248 183 0 140 chr10 107230602 107230695 -33086070 + L1ME4a LINE L1 5953 6032 -89 593 184 88 9 chr10 107231194 107231308 -33085457 + FLAM_A SINE Alu 6 128 -14 925 148 0 15 chr10 107231713 107231848 -33084917 - FLAM_C SINE Alu 0 133 1 1983 144 0 16 chr10 107231944 107232077 -33084688 + AluJb SINE Alu 5 139 -173 2149 123 0 25 chr10 107232077 107232394 -33084371 + AluSx SINE Alu 1 309 -3 1983 144 0 16 chr10 107232394 107232566 -33084199 + AluJb SINE Alu 139 305 -7 512 299 0 0 chr10 107232775 107232902 -33083863 + HAL1 LINE L1 788 914 -1593 2129 89 39 0 chr10 107233618 107233930 -33082835 + AluSx SINE Alu 1 323 0 983 113 15 0 chr10 107234042 107234175 -33082590 - AluSq/x SINE Alu -177 135 1 2342 71 3 0 chr10 107234323 107234638 -33082127 - AluY SINE Alu 0 316 1 1932 125 0 11 chr10 107234642 107234922 -33081843 - AluSx SINE Alu -12 300 24 31 0 0 0 chr10 107235174 107235205 -33081560 + AT_rich Low_complexity Low_complexity 1 31 0 896 112 0 0 chr10 107235210 107235326 -33081439 - FLAM_C SINE Alu -15 118 3 1128 236 147 37 chr10 107235389 107235850 -33080915 + L2 LINE L2 2798 3312 -1 598 273 62 86 chr10 107235853 107236095 -33080670 + L1ME4a LINE L1 5492 5722 -399 3595 131 31 2 chr10 107236095 107236651 -33080114 - L1MB2 LINE L1 -14 6157 5586 598 273 62 86 chr10 107236651 107236814 -33079951 + L1ME4a LINE L1 5722 5887 -234 2300 101 0 0 chr10 107236875 107237171 -33079594 + AluSx SINE Alu 13 308 -4 1204 147 0 11 chr10 107237202 107237379 -33079386 + FAM SINE Alu 1 175 0 247 178 14 14 chr10 107237657 107237730 -33079035 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 2175 112 20 0 chr10 107238002 107238298 -33078467 - AluSx SINE Alu -10 302 1 968 200 111 34 chr10 107238387 107238502 -33078263 - L1MC4 LINE L1 0 8042 7937 342 0 0 0 chr10 107238502 107238540 -33078225 + (TG)n Simple_repeat Simple_repeat 2 39 0 968 200 111 34 chr10 107238540 107238890 -33077875 - L1MC4 LINE L1 -105 7937 7469 349 271 62 8 chr10 107238943 107239072 -33077693 - L1MC4a LINE L1 -569 7239 7104 294 282 10 58 chr10 107239191 107239294 -33077471 - MIR SINE MIR -91 117 20 203 286 0 16 chr10 107239745 107239808 -33076957 + L2 LINE L2 3172 3233 -80 217 286 67 29 chr10 107239858 107239963 -33076802 + MIR3 SINE MIR 98 206 -2 2121 118 7 14 chr10 107241395 107241691 -33075074 + AluSx SINE Alu 2 295 -17 2404 74 6 10 chr10 107241693 107242005 -33074760 + AluY SINE Alu 1 311 0 366 301 92 99 chr10 107242096 107242752 -33074013 - L2 LINE L2 -73 3199 2547 196 283 76 43 chr10 107242855 107242947 -33073818 - MIR3 SINE MIR -111 97 3 2217 102 7 0 chr10 107243102 107243397 -33073368 - AluSp SINE Alu -15 298 2 1997 99 14 34 chr10 107243425 107243756 -33073009 + AluSq SINE Alu 1 325 0 1668 164 41 10 chr10 107244401 107244693 -33072072 + AluJo SINE Alu 1 301 -11 1628 126 0 9 chr10 107244899 107245129 -33071636 - AluSg/x SINE Alu 0 312 85 2120 131 0 0 chr10 107245130 107245420 -33071345 - AluSx SINE Alu -22 290 1 1688 178 3 19 chr10 107245553 107245729 -33071036 - AluJo SINE Alu -3 309 139 2391 71 3 3 chr10 107245729 107246026 -33070739 - AluSp SINE Alu -16 297 1 1688 178 3 19 chr10 107246026 107246163 -33070602 - AluJo SINE Alu -173 139 1 22 0 0 0 chr10 107246171 107246193 -33070572 + AT_rich Low_complexity Low_complexity 1 22 0 2420 88 0 0 chr10 107246206 107246511 -33070254 + AluY SINE Alu 1 305 -6 234 50 0 50 chr10 107246522 107246562 -33070203 + Alu SINE Alu 96 133 0 2168 110 0 17 chr10 107247184 107247485 -33069280 - AluSx SINE Alu -16 296 1 1677 202 0 3 chr10 107247487 107247784 -33068981 - AluSx SINE Alu -16 296 1 541 236 153 25 chr10 107247808 107248011 -33068754 - MIR SINE MIR -28 234 6 1828 151 33 10 chr10 107248037 107248342 -33068423 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 107248359 107248380 -33068385 + AT_rich Low_complexity Low_complexity 1 21 0 7596 42 7 0 chr10 107248758 107249798 -33066967 + L1P2 LINE L1 4443 5491 -663 989 99 23 0 chr10 107249798 107249929 -33066836 + AluSg SINE Alu 1 134 -176 2487 59 0 7 chr10 107249929 107250232 -33066533 + AluY SINE Alu 1 301 -10 5707 47 0 21 chr10 107250232 107250909 -33065856 + L1PA6 LINE L1 5481 6143 -11 22 0 0 0 chr10 107250909 107250931 -33065834 + AT_rich Low_complexity Low_complexity 1 22 0 2445 74 0 13 chr10 107250943 107251253 -33065512 + AluSx SINE Alu 1 306 -6 2454 74 3 0 chr10 107251861 107252159 -33064606 - AluSp SINE Alu -14 299 1 2415 97 7 0 chr10 107252383 107252693 -33064072 - AluSx SINE Alu 0 312 1 1843 139 54 0 chr10 107252860 107253155 -33063610 - AluJb SINE Alu -1 311 1 411 308 8 26 chr10 107253382 107253499 -33063266 + MIR SINE MIR 19 133 -129 813 206 6 6 chr10 107253499 107253664 -33063101 - FRAM SINE Alu -11 165 1 438 245 7 65 chr10 107253664 107253694 -33063071 + MIR SINE MIR 121 151 -111 2294 89 0 0 chr10 107253694 107254013 -33062752 + AluY SINE Alu 1 319 0 438 245 7 65 chr10 107254013 107254120 -33062645 + MIR SINE MIR 151 251 -11 25 31 0 0 chr10 107254443 107254475 -33062290 + AT_rich Low_complexity Low_complexity 1 32 0 1019 212 0 13 chr10 107254530 107254756 -33062009 - AluJo SINE Alu -1 311 89 500 138 0 0 chr10 107254756 107254821 -33061944 - AluSg/x SINE Alu -59 250 186 2031 104 58 0 chr10 107254821 107255099 -33061666 - AluSq SINE Alu -17 296 3 881 130 0 8 chr10 107255702 107255825 -33060940 + FLAM_C SINE Alu 1 122 -11 27 0 0 0 chr10 107255826 107255853 -33060912 + AT_rich Low_complexity Low_complexity 1 27 0 357 329 80 32 chr10 107255916 107256038 -33060727 + L1ME LINE L1 5370 5485 -685 1531 82 22 30 chr10 107256038 107256269 -33060496 + L1PA10 LINE L1 5940 6168 0 357 329 80 32 chr10 107256269 107256618 -33060147 + L1ME LINE L1 5485 5876 -294 324 0 0 0 chr10 107256619 107256655 -33060110 + (TG)n Simple_repeat Simple_repeat 2 37 0 2042 149 0 0 chr10 107258150 107258452 -33058313 - AluSx SINE Alu -10 302 1 412 238 184 12 chr10 107258590 107258712 -33058053 + MIR SINE MIR 63 223 -39 1453 186 15 100 chr10 107258712 107259111 -33057654 + MLT1A1 LTR MaLR 1 365 0 412 238 184 12 chr10 107259111 107259156 -33057609 + MIR SINE MIR 223 259 -3 1943 114 14 4 chr10 107260272 107260553 -33056212 + AluSx SINE Alu 1 284 -28 2071 102 17 7 chr10 107260928 107261223 -33055542 - AluSx SINE Alu -14 298 1 2140 114 20 0 chr10 107261771 107262068 -33054697 + AluSx SINE Alu 1 303 -9 553 260 245 0 chr10 107262168 107262368 -33054397 - MIR SINE MIR -6 256 8 190 171 0 49 chr10 107262394 107262435 -33054330 - MIR3 SINE MIR -3 205 167 1180 93 109 36 chr10 107262562 107262755 -33054010 - AluSq SINE Alu -106 207 1 281 309 118 9 chr10 107262984 107263094 -33053671 + L2 LINE L2 3147 3268 -4 2207 112 7 3 chr10 107263127 107263422 -33053343 - AluSx SINE Alu -14 298 3 2157 140 0 10 chr10 107264259 107264573 -33052192 + AluSx SINE Alu 1 311 -1 2454 85 0 0 chr10 107264644 107264950 -33051815 - AluY SINE Alu -5 306 1 1202 128 11 0 chr10 107265497 107265676 -33051089 + AluJo SINE Alu 120 300 -12 2069 130 7 3 chr10 107265678 107265970 -33050795 + AluSx SINE Alu 1 293 -19 230 133 0 22 chr10 107265972 107266017 -33050748 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 2064 132 6 3 chr10 107266267 107266578 -33050187 + AluSx SINE Alu 1 312 0 1874 129 0 79 chr10 107267058 107267375 -33049390 + AluSx SINE Alu 1 292 -20 283 161 0 36 chr10 107267497 107267546 -33049219 + AluJo/FLAM SINE Alu 81 124 -178 2423 103 0 0 chr10 107267546 107267856 -33048909 - AluSg SINE Alu 0 310 1 24 0 0 0 chr10 107267862 107267886 -33048879 + AT_rich Low_complexity Low_complexity 1 24 0 291 169 85 0 chr10 107268161 107268220 -33048545 - L2 LINE L2 -1 3312 3249 628 149 0 0 chr10 107268433 107268520 -33048245 + FRAM SINE Alu 77 163 -13 787 206 0 0 chr10 107268973 107269099 -33047666 - FLAM_A SINE Alu -4 129 4 455 273 7 40 chr10 107269168 107269318 -33047447 + MIR3 SINE MIR 36 180 -28 256 235 0 29 chr10 107269358 107269426 -33047339 + Charlie8 DNA MER1_type 54 119 -2298 2105 88 33 0 chr10 107269436 107269734 -33047031 + AluSg SINE Alu 1 307 0 502 313 121 71 chr10 107269736 107269824 -33046941 - L2 LINE L2 -40 3232 3150 2262 80 0 17 chr10 107269824 107270123 -33046642 + AluSg SINE Alu 1 294 -16 502 313 121 71 chr10 107270123 107270676 -33046089 - L2 LINE L2 -122 3150 2550 1941 117 29 4 chr10 107270676 107270950 -33045815 + AluSx SINE Alu 1 281 -31 502 313 121 71 chr10 107270950 107271295 -33045470 - L2 LINE L2 -722 2550 2224 1495 269 137 4 chr10 107271344 107271854 -33044911 + MER69 DNA AcHobo 2 579 -1947 2247 107 0 3 chr10 107272411 107272710 -33044055 + AluSx SINE Alu 1 298 -14 189 0 0 0 chr10 107272905 107272926 -33043839 + (T)n Simple_repeat Simple_repeat 1 21 0 308 368 84 67 chr10 107272976 107273079 -33043686 - L1ME LINE L1 -309 5812 5712 2001 170 3 0 chr10 107273079 107273390 -33043375 + AluJb SINE Alu 1 312 0 308 368 84 67 chr10 107273390 107273579 -33043186 - L1ME LINE L1 -409 5712 5516 2124 103 0 0 chr10 107273579 107273889 -33042876 - AluSg SINE Alu 0 320 11 308 368 84 67 chr10 107273889 107273962 -33042803 - L1ME LINE L1 -605 5516 5446 1625 164 41 17 chr10 107273963 107274256 -33042509 - AluJo SINE Alu -12 300 1 2014 154 0 3 chr10 107274265 107274563 -33042202 - AluJb SINE Alu -9 303 7 2270 97 0 0 chr10 107274578 107274866 -33041899 - AluSg SINE Alu -22 288 1 2266 81 7 3 chr10 107274999 107275294 -33041471 - AluSp SINE Alu -14 299 4 329 179 90 0 chr10 107275444 107275511 -33041254 + MER58B DNA MER1_type 37 109 -232 854 209 7 0 chr10 107275521 107275674 -33041091 + FRAM SINE Alu 1 151 -25 1194 183 14 5 chr10 107275677 107275885 -33040880 + MER58B DNA MER1_type 129 338 -3 838 162 0 21 chr10 107275961 107276103 -33040662 - 7SLRNA srpRNA srpRNA -15 305 167 1694 165 0 38 chr10 107276263 107276554 -33040211 + AluJo SINE Alu 1 280 -32 222 37 0 0 chr10 107276601 107276628 -33040137 + (A)n Simple_repeat Simple_repeat 1 27 0 323 214 222 23 chr10 107277141 107277355 -33039410 - L1ME LINE L1 -617 5504 5264 2369 52 10 3 chr10 107277708 107277999 -33038766 + AluY SINE Alu 1 293 -18 465 159 183 24 chr10 107278299 107278425 -33038340 + MER104 DNA Tc2 1 146 -34 206 377 0 18 chr10 107278519 107278633 -33038132 + L2 LINE L2 2626 2737 -577 979 158 6 30 chr10 107278637 107278802 -33037963 - AluJ SINE Alu -19 293 133 936 123 0 43 chr10 107278872 107279010 -33037755 - AluJ SINE Alu -170 132 1 623 285 218 48 chr10 107279661 107279928 -33036837 + L3 LINE CR1 757 978 -599 1407 171 147 12 chr10 107279928 107280186 -33036579 - AluJo SINE Alu -5 297 5 623 285 218 48 chr10 107280186 107280557 -33036208 + L3 LINE CR1 978 1503 -74 190 200 0 25 chr10 107281064 107281104 -33035661 + L3 LINE CR1 1533 1571 -6 1945 111 3 102 chr10 107281779 107282121 -33034644 - AluSx SINE Alu -4 308 1 1242 176 63 0 chr10 107282557 107282779 -33033986 - MER46A DNA MER2_type 0 236 1 1603 129 0 0 chr10 107282892 107283109 -33033656 + AluSx SINE Alu 1 217 -95 2127 115 0 19 chr10 107283267 107283580 -33033185 - AluY SINE Alu -2 309 3 996 58 0 8 chr10 107283752 107283873 -33032892 - AluSg SINE Alu -190 120 1 21 89 0 0 chr10 107284254 107284310 -33032455 + AT_rich Low_complexity Low_complexity 1 56 0 2176 9 0 0 chr10 107284847 107285079 -33031686 + AluYb8 SINE Alu 75 306 -12 914 163 0 0 chr10 107285091 107285220 -33031545 + FLAM_C SINE Alu 1 129 -4 832 225 48 116 chr10 107286178 107286217 -33030548 - MLT2C1 LTR ERVL -2 395 355 180 0 0 0 chr10 107286217 107286237 -33030528 + (CA)n Simple_repeat Simple_repeat 2 21 0 832 225 48 116 chr10 107286237 107286575 -33030190 - MLT2C1 LTR ERVL -42 355 44 1013 159 13 86 chr10 107286970 107287202 -33029563 + L1MD1 LINE L1 6014 6228 -14 211 73 73 18 chr10 107287327 107287382 -33029383 + (TA)n Simple_repeat Simple_repeat 1 58 0 584 216 35 0 chr10 107287387 107287503 -33029262 - FLAM_A SINE Alu -10 123 4 2060 133 10 13 chr10 107287920 107288229 -33028536 - AluSx SINE Alu -4 308 1 2051 116 27 0 chr10 107289232 107289525 -33027240 - AluSx SINE Alu -11 301 1 2113 128 0 3 chr10 107290104 107290392 -33026373 + AluSx SINE Alu 9 295 -17 182 146 0 104 chr10 107290930 107290978 -33025787 + L3 LINE CR1 1231 1273 -304 * 378 313 184 14 chr10 107290953 107291170 -33025595 - L3 LINE CR1 -313 1264 1011 1284 260 113 39 chr10 107291890 107292586 -33024179 + L2 LINE L2 1942 2689 -625 266 269 222 0 chr10 107292731 107292839 -33023926 + L2 LINE L2 3182 3313 0 1733 123 40 0 chr10 107294527 107294778 -33021987 + AluJo SINE Alu 38 298 -14 2172 100 0 4 chr10 107295891 107296170 -33020595 - AluSg SINE Alu -30 280 3 1000 248 64 69 chr10 107296191 107296598 -33020167 + L2 LINE L2 2306 2710 -604 2439 210 60 26 chr10 107296601 107297186 -33019579 - L1ME3A LINE L1 -10 6160 5556 552 273 175 19 chr10 107297187 107297661 -33019104 + L2 LINE L2 2683 3313 0 639 231 113 131 chr10 107297757 107297869 -33018896 - HAL1 LINE L1 0 2507 2395 1932 107 0 86 chr10 107297869 107298206 -33018559 - AluSx SINE Alu -4 308 1 639 231 113 131 chr10 107298206 107298300 -33018465 - HAL1 LINE L1 -112 2395 2301 1452 164 13 0 chr10 107298300 107298532 -33018233 - AluJo SINE Alu -77 235 1 639 231 113 131 chr10 107298532 107299032 -33017733 - HAL1 LINE L1 -206 2301 1815 1736 170 10 10 chr10 107299032 107299321 -33017444 + AluJb SINE Alu 3 291 -21 639 231 113 131 chr10 107299321 107299452 -33017313 - HAL1 LINE L1 -692 1815 1683 1140 172 5 20 chr10 107299452 107299656 -33017109 - AluJo SINE Alu -111 201 1 244 218 24 182 chr10 107299780 107299950 -33016815 - MLT1H LTR MaLR -169 380 238 244 345 106 87 chr10 107300095 107300359 -33016406 + L2 LINE L2 3004 3272 0 209 109 22 0 chr10 107301288 107301334 -33015431 + (TA)n Simple_repeat Simple_repeat 1 47 0 1073 92 0 0 chr10 107301343 107301474 -33015291 + AluY SINE Alu 1 131 -180 1386 159 0 9 chr10 107301474 107301694 -33015071 - AluJb SINE Alu -84 228 11 2041 109 42 0 chr10 107301736 107302019 -33014746 - AluSx SINE Alu -17 295 1 1962 100 59 0 chr10 107302636 107302907 -33013858 - AluSx SINE Alu -23 289 3 333 0 0 0 chr10 107302975 107303011 -33013754 - U2 snRNA snRNA -152 36 1 22 35 0 0 chr10 107303301 107303330 -33013435 + AT_rich Low_complexity Low_complexity 1 29 0 782 80 20 0 chr10 107304230 107304330 -33012435 - AluSg/x SINE Alu -23 289 188 345 299 47 0 chr10 107304351 107304458 -33012307 + L3 LINE CR1 1297 1408 -169 1037 117 19 7 chr10 107304591 107304745 -33012020 + AluY SINE Alu 110 265 -46 206 200 90 70 chr10 107304801 107304901 -33011864 + L3 LINE CR1 1441 1542 -35 2276 70 0 3 chr10 107305294 107305598 -33011167 - AluY SINE Alu 0 303 1 30 45 0 0 chr10 107305627 107305671 -33011094 + AT_rich Low_complexity Low_complexity 1 44 0 2132 89 7 14 chr10 107305994 107306285 -33010480 + AluSx SINE Alu 1 289 -23 2145 125 0 0 chr10 107307498 107307795 -33008970 + AluSx SINE Alu 1 297 -15 196 283 76 43 chr10 107307950 107308042 -33008723 + MIR3 SINE MIR 3 97 -111 366 301 92 99 chr10 107308145 107308801 -33007964 + L2 LINE L2 2547 3199 -73 2404 74 6 10 chr10 107308892 107309204 -33007561 - AluY SINE Alu 0 311 1 2121 118 7 14 chr10 107309206 107309502 -33007263 - AluSx SINE Alu -17 295 2 217 286 67 29 chr10 107310934 107311039 -33005726 - MIR3 SINE MIR -2 206 98 203 286 0 16 chr10 107311089 107311152 -33005613 - L2 LINE L2 -80 3233 3172 294 282 10 58 chr10 107311603 107311706 -33005059 + MIR SINE MIR 20 117 -91 349 271 62 8 chr10 107311825 107311954 -33004811 + L1MC4a LINE L1 7104 7239 -569 968 200 111 34 chr10 107312006 107312356 -33004409 + L1MC4 LINE L1 7469 7937 -105 324 0 0 0 chr10 107312356 107312392 -33004373 + (CA)n Simple_repeat Simple_repeat 2 37 0 968 200 111 34 chr10 107312392 107312507 -33004258 + L1MC4 LINE L1 7937 8042 0 2175 112 20 0 chr10 107312597 107312893 -33003872 + AluSx SINE Alu 1 302 -10 247 178 14 14 chr10 107313165 107313238 -33003527 + (CATATA)n Simple_repeat Simple_repeat 6 78 0 1204 147 0 11 chr10 107313516 107313693 -33003072 - FAM SINE Alu 0 175 1 2300 101 0 0 chr10 107313724 107314020 -33002745 - AluSx SINE Alu -4 308 13 622 275 59 86 chr10 107314080 107314244 -33002521 - L1ME4a LINE L1 -234 5887 5720 3595 131 31 2 chr10 107314244 107314800 -33001965 + L1MB2 LINE L1 5586 6157 -14 622 275 59 86 chr10 107314800 107315042 -33001723 - L1ME4a LINE L1 -401 5720 5492 1128 236 147 37 chr10 107315045 107315506 -33001259 - L2 LINE L2 -1 3312 2798 896 112 0 0 chr10 107315569 107315685 -33001080 + FLAM_C SINE Alu 3 118 -15 31 0 0 0 chr10 107315690 107315721 -33001044 + AT_rich Low_complexity Low_complexity 1 31 0 1932 125 0 11 chr10 107315973 107316253 -33000512 + AluSx SINE Alu 24 300 -12 1062 65 0 0 chr10 107316257 107316573 -33000192 + AluY SINE Alu 1 316 0 983 113 15 0 chr10 107316721 107316854 -32999911 + AluSq/x SINE Alu 1 135 -177 1788 148 4 0 chr10 107317080 107317343 -32999422 - AluSx SINE Alu -37 275 12 331 207 138 0 chr10 107317356 107317443 -32999322 - L1MEd LINE L1 -5991 128 30 1924 94 101 0 chr10 107317574 107317841 -32998924 - AluSp SINE Alu -19 294 1 861 209 31 15 chr10 107317845 107318104 -32998661 - L1M4 LINE L1 -2724 3422 3160 1574 176 75 0 chr10 107318264 107318542 -32998223 + AluJo SINE Alu 1 299 -13 1227 250 255 13 chr10 107318558 107319306 -32997459 - HAL1 LINE L1 -339 2168 1240 30 45 0 0 chr10 107319452 107319496 -32997269 + AT_rich Low_complexity Low_complexity 1 44 0 442 206 43 3 chr10 107320424 107320533 -32996232 + L1MB7 LINE L1 4157 4267 -1879 808 148 7 30 chr10 107320539 107320674 -32996091 + AluSq/x SINE Alu 2 133 -179 300 261 0 0 chr10 107320674 107320743 -32996022 + L1MB7 LINE L1 4258 4326 -1820 994 143 0 0 chr10 107320744 107320891 -32995874 - AluSg/x SINE Alu -10 302 156 2367 70 0 38 chr10 107320907 107321223 -32995542 - AluY SINE Alu -7 304 1 874 203 122 76 chr10 107321223 107321588 -32995177 + L1MB7 LINE L1 4316 4697 -1449 * 1140 163 21 0 chr10 107321579 107321792 -32994973 + L1MB3 LINE L1 5334 5557 -614 2034 139 0 0 chr10 107321795 107322083 -32994682 + AluSq SINE Alu 1 288 -25 402 21 0 0 chr10 107322232 107322279 -32994486 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 814 154 37 0 chr10 107322279 107322415 -32994350 + L1MB3 LINE L1 5554 5694 -489 1805 168 30 0 chr10 107322435 107322738 -32994027 - AluSx SINE Alu 0 312 1 949 127 8 0 chr10 107322738 107322872 -32993893 - AluSq/x SINE Alu -178 135 1 2669 159 37 6 chr10 107322872 107323355 -32993410 + L1MB3 LINE L1 5686 6183 0 2789 156 51 74 chr10 107323365 107323715 -32993050 + L1MB7 LINE L1 4735 5092 -1092 1838 138 34 10 chr10 107323715 107324013 -32992752 + AluSx SINE Alu 1 305 -7 2789 156 51 74 chr10 107324013 107324473 -32992292 + L1MB7 LINE L1 5092 5513 -671 2302 100 3 0 chr10 107324473 107324772 -32991993 - AluSp SINE Alu -13 300 1 2789 156 51 74 chr10 107324772 107325110 -32991655 + L1MB7 LINE L1 5513 5857 -327 2083 131 3 3 chr10 107325110 107325407 -32991358 - AluSx SINE Alu -15 297 1 251 243 54 40 chr10 107325431 107325505 -32991260 - L1ME3A LINE L1 -5 6165 6091 289 180 33 33 chr10 107325530 107325591 -32991174 + Alu SINE Alu 3 56 -246 2215 109 0 3 chr10 107325711 107326005 -32990760 - AluSx SINE Alu -5 307 15 840 268 86 22 chr10 107326042 107326562 -32990203 - L2 LINE L2 0 3313 761 696 307 113 22 chr10 107326563 107326980 -32989785 + L1MEc LINE L1 22 476 -5920 481 203 195 8 chr10 107326980 107327103 -32989662 - L2 LINE L2 -3140 174 29 340 263 38 0 chr10 107327833 107327913 -32988852 - MIR SINE MIR -31 231 149 981 176 93 16 chr10 107328007 107328200 -32988565 - MER63A DNA MER1_type 0 210 3 1378 159 35 9 chr10 107328238 107328470 -32988295 - MSTB LTR MaLR 0 426 189 1831 168 0 10 chr10 107328470 107328768 -32987997 - AluJb SINE Alu -17 295 1 908 173 6 0 chr10 107329216 107329372 -32987393 - MSTB LTR MaLR -267 159 3 23 20 0 61 chr10 107329412 107329461 -32987304 + AT_rich Low_complexity Low_complexity 1 46 0 407 248 152 42 chr10 107329559 107329869 -32986896 - L1MC4 LINE L1 -139 7903 7560 318 250 115 26 chr10 107329890 107330046 -32986719 - L1MC5 LINE L1 -51 7910 7741 2339 103 0 0 chr10 107330119 107330430 -32986335 - AluY SINE Alu 0 311 1 393 279 27 27 chr10 107330439 107330586 -32986179 - L1MC5 LINE L1 -498 7463 7317 611 265 12 71 chr10 107330634 107330735 -32986030 - L1MC4 LINE L1 -611 7431 7326 2237 105 3 0 chr10 107330735 107331041 -32985724 - AluSg SINE Alu -3 307 1 611 265 12 71 chr10 107331041 107331192 -32985573 - L1MC4 LINE L1 -716 7326 7194 1901 149 124 11 chr10 107331517 107331873 -32984892 + MSTD LTR MaLR 1 396 0 2070 146 0 7 chr10 107331970 107332278 -32984487 + AluJb SINE Alu 1 306 -6 314 299 51 80 chr10 107332496 107332633 -32984132 + L2 LINE L2 3136 3268 -4 619 261 104 33 chr10 107333436 107333677 -32983088 - MIR SINE MIR -1 261 4 205 176 0 0 chr10 107333928 107333962 -32982803 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 522 99 25 0 chr10 107334467 107334548 -32982217 - Alu SINE Alu -2 307 225 983 224 50 104 chr10 107334693 107334761 -32982004 - L1M4 LINE L1 -1756 4390 4320 2047 146 0 0 chr10 107334761 107335056 -32981709 + AluSq SINE Alu 1 295 -18 983 224 50 104 chr10 107335056 107335130 -32981635 - L1M4 LINE L1 -1826 4320 4244 1600 152 0 0 chr10 107335130 107335360 -32981405 - AluJb SINE Alu -19 293 64 983 224 50 104 chr10 107335360 107335591 -32981174 - L1M4 LINE L1 -1902 4244 4002 2130 133 3 0 chr10 107335591 107335900 -32980865 - AluSx SINE Alu -2 310 1 983 224 50 104 chr10 107335900 107336044 -32980721 - L1M4 LINE L1 -2144 4002 3898 1531 181 3 21 chr10 107336044 107336326 -32980439 - AluJo SINE Alu -35 277 1 983 224 50 104 chr10 107336326 107336341 -32980424 - L1M4 LINE L1 -2248 3898 3884 4586 67 12 10 chr10 107336380 107337403 -32979362 - MER11A LTR ERVK 0 1266 1 644 306 47 0 chr10 107337642 107337812 -32978953 - MER45A DNA AcHobo 0 178 1 2111 130 3 0 chr10 107337892 107338193 -32978572 + AluSx SINE Alu 1 302 -10 2188 100 7 0 chr10 107338389 107338678 -32978087 + AluSp SINE Alu 1 291 -22 1560 183 66 3 chr10 107338804 107339093 -32977672 + AluJo SINE Alu 1 307 -5 362 292 35 0 chr10 107339202 107339315 -32977450 + MER20B DNA MER1_type 383 499 -284 1789 179 27 3 chr10 107339624 107339925 -32976840 - AluJb SINE Alu -4 308 1 242 200 145 76 chr10 107339955 107340011 -32976754 + L1ME4a LINE L1 5967 6018 -103 2119 118 7 0 chr10 107340011 107340308 -32976457 - AluSx SINE Alu -13 299 1 242 200 145 76 chr10 107340308 107340396 -32976369 + L1ME4a LINE L1 6018 6121 0 2300 110 0 0 chr10 107340568 107340859 -32975906 + AluSg SINE Alu 1 291 -19 366 23 0 0 chr10 107341041 107341084 -32975681 + (TG)n Simple_repeat Simple_repeat 2 44 0 2298 91 7 14 chr10 107341088 107341385 -32975380 - AluSq SINE Alu -18 295 1 741 295 5 0 chr10 107341513 107341703 -32975062 - L1MC/D LINE L1 -2096 5712 5522 2107 98 0 7 chr10 107341758 107342035 -32974730 + AluSx SINE Alu 1 275 -37 189 0 0 0 chr10 107342035 107342056 -32974709 + (T)n Simple_repeat Simple_repeat 1 21 0 214 333 274 8 chr10 107342445 107342562 -32974203 + MIR SINE MIR 6 153 -109 195 283 87 0 chr10 107342632 107342724 -32974041 + MIR SINE MIR 88 187 -75 274 388 68 20 chr10 107343564 107343711 -32973054 - L2 LINE L2 -8 3264 3111 * 582 253 52 46 chr10 107343708 107343902 -32972863 - MIR SINE MIR -5 257 63 983 180 12 12 chr10 107344140 107344301 -32972464 + FRAM SINE Alu 1 161 -5 335 287 33 100 chr10 107344912 107344966 -32971799 - MER91A DNA MER1_type -1 195 139 2124 135 3 0 chr10 107344966 107345277 -32971488 + AluSx SINE Alu 1 312 0 335 287 33 100 chr10 107345277 107345372 -32971393 - MER91A DNA MER1_type -57 139 56 309 138 61 182 chr10 107345453 107345601 -32971164 - L1MC3 LINE L1 -986 6799 6730 377 289 35 18 chr10 107345791 107345905 -32970860 - L2 LINE L2 -19 3294 3179 1287 263 206 28 chr10 107346689 107347078 -32969687 - L2 LINE L2 -21 3292 2974 2166 124 7 0 chr10 107347078 107347376 -32969389 + AluSx SINE Alu 1 300 -12 1287 263 206 28 chr10 107347376 107348066 -32968699 - L2 LINE L2 -339 2974 2009 1706 116 123 0 chr10 107348073 107348350 -32968415 - AluSx SINE Alu -1 311 1 358 167 15 0 chr10 107348380 107348446 -32968319 + AluJ/FLAM SINE Alu 1 67 -235 1992 105 18 4 chr10 107349037 107349193 -32967572 - AluSx SINE Alu -29 283 120 185 0 40 0 chr10 107349193 107349218 -32967547 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1992 105 18 4 chr10 107349218 107349338 -32967427 - AluSx SINE Alu -192 120 3 2201 102 7 3 chr10 107350067 107350362 -32966403 - AluSx SINE Alu -16 296 1 2208 90 10 7 chr10 107351348 107351648 -32965117 - AluSq SINE Alu -12 301 1 507 272 40 35 chr10 107351801 107351974 -32964791 + MIR SINE MIR 7 180 -82 920 237 176 66 chr10 107352570 107353008 -32963757 - L1MEd LINE L1 -5315 804 319 2205 104 0 0 chr10 107353031 107353311 -32963454 - AluSx SINE Alu -32 280 1 531 239 0 39 chr10 107353459 107353589 -32963176 - L2 LINE L2 -1 3312 3188 274 253 63 0 chr10 107353908 107353987 -32962778 - LTR67 LTR ERVL -354 203 120 310 266 63 63 chr10 107354076 107354219 -32962546 - L1MEd LINE L1 -5855 264 122 933 145 0 0 chr10 107355178 107355309 -32961456 - FLAM_C SINE Alu -2 131 1 326 265 103 70 chr10 107355458 107355643 -32961122 - MIR SINE MIR -36 226 36 939 72 112 0 chr10 107355704 107355829 -32960936 - MER85 DNA T2_type 0 139 1 2139 177 119 4 chr10 107355829 107356326 -32960439 - Charlie1a DNA MER1_type -9 1446 893 255 231 0 0 chr10 107356340 107356392 -32960373 + L1MC3 LINE L1 7060 7111 -674 351 227 23 34 chr10 107356407 107356495 -32960270 + MLT1F1 LTR MaLR 35 121 -446 2357 181 40 6 chr10 107356495 107357031 -32959734 + L1MD3 LINE L1 7184 7986 -9 3833 187 72 30 chr10 107357033 107357277 -32959488 - Charlie1a DNA MER1_type -1867 894 662 2185 103 36 10 chr10 107357277 107357578 -32959187 - AluSx SINE Alu -2 310 2 2297 110 0 3 chr10 107357579 107357880 -32958885 - AluSx SINE Alu -12 300 1 3833 187 72 30 chr10 107357880 107358230 -32958535 - Charlie1a DNA MER1_type -2099 662 249 1571 157 54 18 chr10 107358230 107358510 -32958255 - AluJo SINE Alu -22 290 1 3833 187 72 30 chr10 107358510 107358769 -32957996 - Charlie1a DNA MER1_type -2512 249 2 2162 119 3 20 chr10 107359614 107359917 -32956848 + AluSx SINE Alu 1 298 -14 2044 88 0 0 chr10 107360552 107360801 -32955964 + AluSc SINE Alu 38 286 -23 2112 116 10 0 chr10 107360825 107361119 -32955646 + AluSx SINE Alu 3 299 -13 2381 77 0 19 chr10 107361359 107361669 -32955096 + AluSc SINE Alu 1 304 -5 2244 107 13 0 chr10 107361998 107362297 -32954468 - AluSx SINE Alu -9 303 1 721 219 87 13 chr10 107362622 107362720 -32954045 + MER58 DNA MER1_type 1 90 -2330 1960 164 3 6 chr10 107362720 107363031 -32953734 + AluJo SINE Alu 1 310 -2 721 219 87 13 chr10 107363031 107363214 -32953551 + MER58 DNA MER1_type 90 2420 0 247 0 79 0 chr10 107364078 107364116 -32952649 + T-rich Low_complexity Low_complexity 2 42 0 415 305 57 38 chr10 107364891 107365153 -32951612 + L1ME4a LINE L1 5835 6101 -20 2005 118 40 20 chr10 107365306 107365610 -32951155 + AluSg SINE Alu 1 310 0 1699 156 44 37 chr10 107366673 107366968 -32949797 + AluJo SINE Alu 1 297 -15 2072 138 0 0 chr10 107368438 107368761 -32948004 - AluSx SINE Alu 0 323 1 1649 151 39 14 chr10 107369347 107369631 -32947134 + AluJo SINE Alu 1 291 -21 1809 138 57 13 chr10 107369768 107370066 -32946699 + AluSx SINE Alu 2 312 0 2158 99 21 0 chr10 107370602 107370885 -32945880 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr10 107370885 107370909 -32945856 + AT_rich Low_complexity Low_complexity 1 24 0 293 283 127 55 chr10 107371059 107371420 -32945345 + L1M4 LINE L1 3564 3950 -2196 389 295 50 0 chr10 107372348 107372487 -32944278 - MER5A DNA MER1_type 0 189 44 656 202 0 0 chr10 107373873 107374013 -32942752 - FLAM_A SINE Alu 0 140 1 1813 118 20 69 chr10 107374051 107374356 -32942409 + AluJo SINE Alu 3 292 -20 301 290 32 32 chr10 107374735 107374859 -32941906 + MER5B DNA MER1_type 1 124 -54 1716 140 114 0 chr10 107376583 107376854 -32939911 - AluJo SINE Alu -10 302 1 182 288 51 0 chr10 107377153 107377212 -32939553 - L2 LINE L2 -25 3288 3227 638 175 7 80 chr10 107377709 107377846 -32938919 + FLAM_C SINE Alu 2 128 -15 25 51 0 0 chr10 107377848 107377887 -32938878 + AT_rich Low_complexity Low_complexity 1 39 0 1877 241 138 13 chr10 107378315 107379004 -32937761 - L1ME3A LINE L1 0 6170 5396 199 375 0 0 chr10 107379744 107379824 -32936941 + MIR SINE MIR 33 112 -96 1702 133 0 0 chr10 107380186 107380426 -32936339 + AluSx SINE Alu 54 293 -19 540 241 147 29 chr10 107382246 107382491 -32934274 + MER46C DNA MER2_type 64 337 -1 21 0 0 0 chr10 107382491 107382512 -32934253 + AT_rich Low_complexity Low_complexity 1 21 0 2866 22 0 3 chr10 107383065 107383383 -32933382 + AluYb8 SINE Alu 1 317 -1 270 281 70 123 chr10 107383403 107383492 -32933273 - MIR SINE MIR -12 250 158 2109 109 4 4 chr10 107383492 107383767 -32932998 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 107383771 107383791 -32932974 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 270 281 70 123 chr10 107383791 107383867 -32932898 - MIR SINE MIR -107 155 89 2099 135 0 3 chr10 107384036 107384332 -32932433 + AluJb SINE Alu 1 295 -17 204 291 97 18 chr10 107384438 107384603 -32932162 + L3 LINE CR1 1206 1383 -194 22 0 0 0 chr10 107392014 107392036 -32924729 + AT_rich Low_complexity Low_complexity 1 22 0 288 0 0 0 chr10 107396748 107396780 -32919985 + (T)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr10 107397533 107397555 -32919210 + AT_rich Low_complexity Low_complexity 1 22 0 2198 85 14 10 chr10 107397996 107398290 -32918475 - AluSp SINE Alu -18 295 1 218 188 0 21 chr10 107399270 107399318 -32917447 + CT-rich Low_complexity Low_complexity 2 48 0 893 179 19 0 chr10 107399829 107399985 -32916780 - AluJb SINE Alu -17 295 137 183 0 0 0 chr10 107400422 107400446 -32916319 - L2 LINE L2 -6 3307 3284 1973 137 7 17 chr10 107400644 107400944 -32915821 - AluSx SINE Alu -15 297 1 1114 99 0 0 chr10 107400954 107401095 -32915670 - AluSp/q SINE Alu -17 296 156 400 175 318 0 chr10 107401759 107401885 -32914880 + MER105 DNA DNA 1 166 -38 247 208 181 0 chr10 107401888 107401960 -32914805 + MER105 DNA DNA 119 203 -1 472 254 65 24 chr10 107401975 107402144 -32914621 - MIR SINE MIR -58 204 29 193 321 0 0 chr10 107402530 107402583 -32914182 + L3 LINE CR1 1518 1570 -7 2359 88 0 0 chr10 107404206 107404501 -32912264 + AluSc SINE Alu 1 295 -14 2416 91 0 7 chr10 107406168 107406476 -32910289 + AluSg SINE Alu 1 306 -4 926 183 59 10 chr10 107407743 107407945 -32908820 - L1MD3 LINE L1 -13 7982 7771 661 264 43 14 chr10 107408056 107408264 -32908501 + MIR SINE MIR 49 262 0 1824 167 7 7 chr10 107408686 107408979 -32907786 - AluJb SINE Alu -19 293 1 21 82 0 0 chr10 107409139 107409188 -32907577 + AT_rich Low_complexity Low_complexity 1 49 0 25 65 0 0 chr10 107410938 107410984 -32905781 + AT_rich Low_complexity Low_complexity 1 46 0 660 104 22 82 chr10 107411104 107411238 -32905527 - FLAM_A SINE Alu 0 142 17 406 261 159 74 chr10 107411724 107412114 -32904651 + MLT1H LTR MaLR 17 439 -110 631 81 0 0 chr10 107412123 107412209 -32904556 - Alu SINE Alu -3 307 222 1713 175 31 3 chr10 107413460 107413751 -32903014 - AluJb SINE Alu -13 299 1 2163 107 14 7 chr10 107416998 107417289 -32899476 + AluSx SINE Alu 1 293 -19 2219 85 7 0 chr10 107417478 107417759 -32899006 + AluSx SINE Alu 1 311 0 213 0 36 0 chr10 107417759 107417787 -32898978 + (GAAAA)n Simple_repeat Simple_repeat 2 70 0 2095 102 36 7 chr10 107418451 107418754 -32898011 - AluSx SINE Alu 0 312 1 227 167 0 0 chr10 107419758 107419794 -32896971 + AluSx SINE Alu 1 36 -97 2090 122 0 0 chr10 107419794 107420080 -32896685 + AluSx SINE Alu 16 301 -11 28 29 0 0 chr10 107420556 107420591 -32896174 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 24 71 chr10 107421417 107421459 -32895306 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr10 107422905 107422933 -32893832 + AT_rich Low_complexity Low_complexity 1 28 0 197 330 132 19 chr10 107423163 107423269 -32893496 - L2 LINE L2 -8 3264 3147 233 319 106 0 chr10 107423575 107423716 -32893049 - Charlie8 DNA MER1_type -2162 255 100 1814 95 62 46 chr10 107423738 107424043 -32892722 + AluSg SINE Alu 1 310 0 235 291 164 0 chr10 107424487 107424597 -32892168 - L3b LINE CR1 -150 1433 1306 2136 125 0 3 chr10 107424723 107425027 -32891738 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr10 107425777 107425800 -32890965 + AT_rich Low_complexity Low_complexity 1 23 0 285 235 50 17 chr10 107425812 107425931 -32890834 - L1MC5 LINE L1 -56 7905 7783 1562 188 32 19 chr10 107426171 107426479 -32890286 - AluJo SINE Alu 0 312 1 795 259 88 86 chr10 107426905 107426968 -32889797 - MARNA DNA Mariner -48 538 477 1584 224 0 7 chr10 107426968 107427272 -32889493 + AluJo SINE Alu 1 302 -10 795 259 88 86 chr10 107427272 107427710 -32889055 - MARNA DNA Mariner -109 477 36 1761 178 16 13 chr10 107427957 107428261 -32888504 - AluJb SINE Alu -5 307 3 26 0 0 0 chr10 107428364 107428390 -32888375 + AT_rich Low_complexity Low_complexity 1 26 0 2253 110 3 0 chr10 107428693 107428984 -32887781 + AluSp SINE Alu 1 292 -21 2019 162 7 0 chr10 107429424 107429733 -32887032 + AluJb SINE Alu 1 311 -1 3936 172 44 34 chr10 107429736 107430910 -32885855 + L1MB4 LINE L1 4987 6173 -7 1915 136 3 3 chr10 107431497 107431783 -32884982 + AluSx SINE Alu 1 286 -26 227 152 0 22 chr10 107432200 107432246 -32884519 + MER34 LTR ERV1 67 111 -431 1123 224 44 53 chr10 107432280 107432691 -32884074 + MER39 LTR ERV1 301 707 0 1309 185 49 62 chr10 107432728 107432900 -32883865 - AluJo SINE Alu -8 304 136 593 118 0 0 chr10 107432900 107432985 -32883780 - L1PA10 LINE L1 -10 6158 6074 1309 185 49 62 chr10 107432985 107433120 -32883645 - AluJo SINE Alu -176 136 1 204 315 171 0 chr10 107433125 107433236 -32883529 + MIR SINE MIR 132 261 -1 23 0 0 0 chr10 107433815 107433838 -32882927 + AT_rich Low_complexity Low_complexity 1 23 0 329 186 69 26 chr10 107434256 107434363 -32882402 - MIR SINE MIR -59 149 45 210 109 62 0 chr10 107434473 107434537 -32882228 + (TTTAA)n Simple_repeat Simple_repeat 1 68 0 2209 112 0 13 chr10 107435947 107436252 -32880513 + AluSg SINE Alu 1 301 -9 6818 66 16 49 chr10 107436382 107438626 -32878139 + SVA Other Other 4 1386 0 26 30 0 0 chr10 107438626 107438659 -32878106 + AT_rich Low_complexity Low_complexity 1 33 0 1063 182 4 44 chr10 107439390 107439615 -32877150 + MLT1A1 LTR MaLR 3 218 -147 1391 179 42 79 chr10 107439620 107439690 -32877075 + L1MD3 LINE L1 7599 7670 -325 1876 181 0 3 chr10 107439690 107439989 -32876776 + AluJb SINE Alu 2 299 -13 1391 179 42 79 chr10 107439989 107440009 -32876756 + L1MD3 LINE L1 7670 7689 -306 2181 125 7 3 chr10 107440009 107440306 -32876459 + AluSq SINE Alu 1 298 -15 1391 179 42 79 chr10 107440306 107440594 -32876171 + L1MD3 LINE L1 7689 7964 -31 2339 70 0 23 chr10 107440598 107440900 -32875865 - AluY SINE Alu -16 295 1 424 173 23 90 chr10 107440942 107441041 -32875724 + L1ME2 LINE L1 5814 5918 -246 2148 129 53 34 chr10 107441041 107441324 -32875441 + THE1B LTR MaLR 1 294 -70 2061 125 24 0 chr10 107441324 107441611 -32875154 - AluSq SINE Alu -19 294 1 2148 129 53 34 chr10 107441611 107441684 -32875081 + THE1B LTR MaLR 294 364 0 12021 89 4 1 chr10 107441684 107443259 -32873506 + THE1B-int LTR MaLR 1 1580 0 2040 121 76 51 chr10 107443259 107443543 -32873222 + THE1B LTR MaLR 1 276 -88 2174 100 0 42 chr10 107443543 107443852 -32872913 + AluSx SINE Alu 1 296 -16 2181 108 0 7 chr10 107443853 107444148 -32872617 + AluSx SINE Alu 1 293 -19 2040 121 76 51 chr10 107444148 107444216 -32872549 + THE1B LTR MaLR 275 364 0 424 173 23 90 chr10 107444216 107444247 -32872518 + L1ME2 LINE L1 5915 5937 -227 537 205 47 158 chr10 107444304 107444538 -32872227 + MIR SINE MIR 45 252 -10 2091 122 10 3 chr10 107444677 107444973 -32871792 - AluSx SINE Alu -14 298 1 206 238 0 0 chr10 107445062 107445104 -32871661 + L2 LINE L2 3264 3305 -8 180 77 0 0 chr10 107445976 107446002 -32870763 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 107446010 107446033 -32870732 + AT_rich Low_complexity Low_complexity 1 23 0 2579 95 11 3 chr10 107446323 107446682 -32870083 - L1PA8 LINE L1 -6 6166 5805 2324 89 3 0 chr10 107446778 107447071 -32869694 + AluSq SINE Alu 3 296 -17 4279 164 54 33 chr10 107447653 107447971 -32868794 - L1MA9 LINE L1 -35 6277 5967 1828 154 10 7 chr10 107447971 107448269 -32868496 - AluJo SINE Alu -13 299 1 4279 164 54 33 chr10 107448269 107449171 -32867594 - L1MA9 LINE L1 -345 5967 5042 1855 168 0 13 chr10 107449225 107449534 -32867231 + AluJb SINE Alu 1 305 -7 27 0 0 0 chr10 107449724 107449751 -32867014 + AT_rich Low_complexity Low_complexity 1 27 0 191 200 73 18 chr10 107449823 107449878 -32866887 - L2 LINE L2 -66 3247 3190 1830 175 30 0 chr10 107450445 107450748 -32866017 + AluJb SINE Alu 1 312 0 2299 102 6 19 chr10 107450753 107451067 -32865698 + AluSg SINE Alu 1 310 0 232 227 0 134 chr10 107451245 107451342 -32865423 - MER5A DNA MER1_type 0 189 106 373 209 36 36 chr10 107451348 107451458 -32865307 + Charlie7 DNA MER1_type 1 110 -2502 1080 162 0 32 chr10 107451483 107451668 -32865097 - AluJb SINE Alu -14 298 120 1966 161 3 0 chr10 107451723 107452022 -32864743 + AluJo SINE Alu 1 300 -12 195 332 129 27 chr10 107454648 107454904 -32861861 + L2 LINE L2 2376 2657 -657 1174 196 133 0 chr10 107454923 107455208 -32861557 + MER5C DNA MER1_type 2 324 0 182 256 26 0 chr10 107455754 107455793 -32860972 + L2 LINE L2 3205 3244 -28 1197 117 29 10 chr10 107455850 107456055 -32860710 + L1MB7 LINE L1 5976 6184 0 2457 63 3 10 chr10 107456370 107456671 -32860094 + AluY SINE Alu 1 299 -12 226 189 38 0 chr10 107456872 107456925 -32859840 - HsTC2 DNA Tc2 -14 1884 1830 252 282 14 0 chr10 107457182 107457253 -32859512 + L1MEd LINE L1 574 645 -5474 244 268 0 0 chr10 107457263 107457334 -32859431 - HsTC2 DNA Tc2 -1824 74 4 22 35 0 0 chr10 107457840 107457869 -32858896 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 107457905 107457926 -32858839 + AT_rich Low_complexity Low_complexity 1 21 0 2775 187 137 29 chr10 107458111 107459231 -32857534 - L1ME1 LINE L1 -5 6161 4879 2226 97 7 7 chr10 107459231 107459529 -32857236 + AluSp SINE Alu 1 298 -15 2775 187 137 29 chr10 107459529 107459674 -32857091 - L1ME1 LINE L1 -1287 4879 4751 203 185 25 49 chr10 107462428 107462509 -32854256 + A-rich Low_complexity Low_complexity 3 81 0 450 291 120 0 chr10 107462532 107462690 -32854075 + MIR SINE MIR 2 178 -84 239 191 64 0 chr10 107463132 107463179 -32853586 - L2 LINE L2 0 3272 3223 358 317 191 6 chr10 107463361 107463544 -32853221 - MIR SINE MIR -39 223 7 657 110 0 0 chr10 107463656 107463747 -32853018 + AluJb SINE Alu 201 291 -21 1529 203 21 21 chr10 107463931 107464222 -32852543 + AluJo SINE Alu 1 291 -21 274 318 62 16 chr10 107464230 107464359 -32852406 - L2 LINE L2 -652 2662 2528 2206 98 3 3 chr10 107464522 107464817 -32851948 + AluSp SINE Alu 1 295 -18 1596 97 0 0 chr10 107464825 107465031 -32851734 + AluY SINE Alu 1 206 -105 200 225 12 38 chr10 107465098 107465178 -32851587 + (TTATA)n Simple_repeat Simple_repeat 2 79 0 521 267 96 53 chr10 107465230 107465605 -32851160 + L1MC4a LINE L1 6217 6607 -1201 1780 226 57 67 chr10 107465648 107465842 -32850923 + L1M4 LINE L1 2644 2838 -3308 2254 109 0 0 chr10 107465842 107466144 -32850621 + AluSc SINE Alu 1 302 -7 1780 226 57 67 chr10 107466144 107466584 -32850181 + L1M4 LINE L1 2838 3269 -2877 2195 106 3 10 chr10 107466584 107466895 -32849870 + AluSx SINE Alu 1 309 -3 1780 226 57 67 chr10 107466895 107467135 -32849630 + L1M4 LINE L1 3269 3510 -2636 907 199 6 0 chr10 107467137 107467293 -32849472 + FAM SINE Alu 1 157 -18 363 44 0 0 chr10 107467297 107467342 -32849423 + (CA)n Simple_repeat Simple_repeat 2 46 0 700 188 0 7 chr10 107467342 107467491 -32849274 + L1M4 LINE L1 4263 4410 -1736 1154 190 8 38 chr10 107467491 107467728 -32849037 + AluJo SINE Alu 81 310 -2 * 4035 198 39 14 chr10 107467721 107468781 -32847984 + L1M4 LINE L1 4404 5485 -699 2302 86 13 7 chr10 107468781 107469083 -32847682 + AluSc SINE Alu 1 304 -5 364 132 38 0 chr10 107469192 107469245 -32847520 - MER8 DNA MER2_type 0 239 185 1423 191 16 8 chr10 107469245 107469502 -32847263 - AluJo SINE Alu -9 303 45 230 322 17 0 chr10 107469517 107469576 -32847189 + Tigger2 DNA MER2_type 2649 2708 -10 266 54 27 0 chr10 107470172 107470209 -32846556 - AluY SINE Alu -180 121 84 1109 138 51 55 chr10 107470209 107470426 -32846339 - AluJb SINE Alu -92 220 5 2238 98 3 3 chr10 107470651 107470946 -32845819 + AluSp SINE Alu 1 295 -18 1619 97 0 0 chr10 107470954 107471160 -32845605 + AluY SINE Alu 1 206 -105 200 225 12 38 chr10 107471227 107471307 -32845458 + (TTATA)n Simple_repeat Simple_repeat 2 79 0 644 270 93 52 chr10 107471359 107471744 -32845021 + L1MC4a LINE L1 6217 6617 -1191 2019 226 60 65 chr10 107471749 107471971 -32844794 + L1MB7 LINE L1 2612 2834 -3312 2282 109 0 0 chr10 107471971 107472273 -32844492 + AluSc SINE Alu 1 302 -7 2019 226 60 65 chr10 107472273 107472713 -32844052 + L1MB7 LINE L1 2834 3270 -2876 2184 110 3 10 chr10 107472713 107473023 -32843742 + AluSx SINE Alu 1 308 -4 2019 226 60 65 chr10 107473023 107473263 -32843502 + L1MB7 LINE L1 3270 3510 -2636 909 199 6 0 chr10 107473265 107473421 -32843344 + FAM SINE Alu 1 157 -18 381 43 0 0 chr10 107473425 107473472 -32843293 + (CA)n Simple_repeat Simple_repeat 2 48 0 760 188 0 7 chr10 107473472 107473621 -32843144 + L1MB7 LINE L1 4263 4410 -1736 1119 190 8 38 chr10 107473621 107473858 -32842907 + AluJo SINE Alu 81 310 -2 2089 184 47 31 chr10 107473858 107474911 -32841854 + L1MB7 LINE L1 4411 5445 -739 2249 78 18 7 chr10 107474911 107475195 -32841570 + AluSc SINE Alu 1 287 -22 2089 184 47 31 chr10 107475195 107475363 -32841402 + L1MB7 LINE L1 5445 5609 -575 1645 182 3 17 chr10 107475363 107475660 -32841105 - AluJo SINE Alu -19 293 1 2089 184 47 31 chr10 107475660 107475748 -32841017 + L1MB7 LINE L1 5609 5694 -490 903 176 0 57 chr10 107475748 107475924 -32840841 + FRAM SINE Alu 1 166 0 2089 184 47 31 chr10 107475924 107476201 -32840564 + L1MB7 LINE L1 5694 6163 -21 2309 84 7 0 chr10 107476201 107476488 -32840277 - AluSc SINE Alu -16 293 5 2089 184 47 31 chr10 107476488 107476506 -32840259 + L1MB7 LINE L1 6163 6179 -5 1127 237 87 46 chr10 107476511 107476949 -32839816 + L1ME3 LINE L1 5263 5718 -444 2618 237 88 15 chr10 107477008 107477830 -32838935 - L1ME1 LINE L1 -31 6135 5254 1430 122 9 45 chr10 107477911 107478133 -32838632 + AluSx SINE Alu 1 214 -98 1508 199 7 17 chr10 107478133 107478425 -32838340 + AluJo SINE Alu 1 289 -23 2386 91 0 0 chr10 107478431 107478728 -32838037 - AluSc SINE Alu -12 297 1 531 188 38 50 chr10 107478750 107478910 -32837855 + L1ME3 LINE L1 5734 5891 -271 1168 196 14 61 chr10 107479260 107479384 -32837381 - AluJo SINE Alu -7 305 177 2252 112 3 0 chr10 107479384 107479688 -32837077 + AluSq SINE Alu 1 305 -8 1168 196 14 61 chr10 107479688 107479843 -32836922 - AluJo SINE Alu -135 177 39 2339 95 7 0 chr10 107479848 107480142 -32836623 - AluSp SINE Alu -17 296 1 2407 177 107 6 chr10 107480154 107480667 -32836098 - L1MD2 LINE L1 -1 6358 5794 1798 197 3 0 chr10 107480815 107481125 -32835640 - AluJo SINE Alu -1 311 1 2264 106 7 7 chr10 107481187 107481490 -32835275 - AluSx SINE Alu -9 303 1 2024 142 3 10 chr10 107481803 107482106 -32834659 - AluJb SINE Alu -11 301 1 810 156 127 53 chr10 107483188 107483432 -32833333 + L1MA8 LINE L1 6028 6289 -2 186 133 0 0 chr10 107483432 107483462 -32833303 + (CATATA)n Simple_repeat Simple_repeat 1 30 0 1906 163 0 7 chr10 107483511 107483799 -32832966 + AluJo SINE Alu 5 290 -22 1394 171 3 128 chr10 107483871 107484017 -32832748 + AluJo SINE Alu 1 81 -221 2092 110 10 17 chr10 107484017 107484307 -32832458 + AluSg SINE Alu 1 288 -22 1394 171 3 128 chr10 107484307 107484504 -32832261 + AluJo SINE Alu 81 301 -1 203 156 0 0 chr10 107484667 107484699 -32832066 + (CA)n Simple_repeat Simple_repeat 2 33 0 1726 170 23 13 chr10 107484699 107484999 -32831766 - AluJb SINE Alu -9 303 1 872 133 0 0 chr10 107485949 107486077 -32830688 + FLAM_C SINE Alu 1 128 -5 2016 125 24 3 chr10 107486100 107486396 -32830369 + AluSq SINE Alu 1 302 -11 2323 61 4 7 chr10 107486420 107486698 -32830067 - AluY SINE Alu -13 298 22 25 0 0 0 chr10 107486698 107486723 -32830042 + AT_rich Low_complexity Low_complexity 1 25 0 2152 123 7 0 chr10 107486733 107487033 -32829732 + AluSx SINE Alu 8 309 -3 932 171 14 0 chr10 107487033 107487199 -32829566 + AluSg/x SINE Alu 132 299 0 774 182 0 0 chr10 107487199 107487320 -32829445 - AluJo/FLAM SINE Alu -190 122 2 2307 87 17 0 chr10 107487508 107487807 -32828958 + AluY SINE Alu 1 304 -7 1043 91 0 0 chr10 107487817 107487949 -32828816 + AluSg1 SINE Alu 1 132 -177 2484 86 0 0 chr10 107487986 107488288 -32828477 + AluSx SINE Alu 1 302 -10 1951 155 7 0 chr10 107488297 107488594 -32828171 + AluSx SINE Alu 1 299 -13 1034 153 0 77 chr10 107488595 107488778 -32827987 + AluSg1 SINE Alu 135 303 -9 416 242 193 20 chr10 107488842 107489015 -32827750 + MIR SINE MIR 2 189 -62 844 163 268 21 chr10 107490739 107490978 -32825787 - AluJb SINE Alu -14 298 1 1094 192 10 34 chr10 107491707 107491915 -32824850 - AluJo SINE Alu -23 289 87 1764 193 68 0 chr10 107491963 107492315 -32824450 - L1MB5 LINE L1 -8 6166 5791 514 207 50 0 chr10 107492313 107492434 -32824331 + L1ME1 LINE L1 4914 5040 -1106 * 1590 142 17 85 chr10 107492438 107492733 -32824032 + AluJb SINE Alu 1 275 -37 1960 97 14 28 chr10 107492734 107493022 -32823743 + AluSc SINE Alu 12 295 -14 226 197 16 49 chr10 107493030 107493091 -32823674 + MER41B LTR ERV1 469 527 -108 189 107 0 0 chr10 107493105 107493133 -32823632 + (T)n Simple_repeat Simple_repeat 1 28 0 2422 107 0 0 chr10 107493301 107493611 -32823154 - AluSg SINE Alu 0 310 1 895 91 0 0 chr10 107493611 107493732 -32823033 + MER41B LTR ERV1 515 635 0 328 267 0 0 chr10 107493738 107493813 -32822952 - L2 LINE L2 -247 3066 2992 445 98 33 0 chr10 107493863 107493924 -32822841 - AluY SINE Alu -134 177 115 1054 146 0 6 chr10 107493929 107494094 -32822671 + FRAM SINE Alu 11 174 -2 3201 214 35 30 chr10 107494325 107494818 -32821947 + L1ME1 LINE L1 5197 5697 -469 1637 153 64 18 chr10 107494818 107495099 -32821666 + AluJb SINE Alu 5 298 -14 3201 214 35 30 chr10 107495099 107495568 -32821197 + L1ME1 LINE L1 5697 6162 -4 638 174 0 65 chr10 107495576 107495714 -32821051 + FLAM_C SINE Alu 2 130 -3 2244 107 0 16 chr10 107496087 107496395 -32820370 + AluSx SINE Alu 1 303 -9 2193 96 7 0 chr10 107496729 107497011 -32819754 + AluSx SINE Alu 11 294 -18 231 242 15 0 chr10 107497592 107497658 -32819107 + L1MC4 LINE L1 6640 6706 -1336 288 0 0 0 chr10 107497815 107497847 -32818918 + (CG)n Simple_repeat Simple_repeat 2 33 0 216 0 0 0 chr10 107498202 107498226 -32818539 + (TA)n Simple_repeat Simple_repeat 2 25 0 307 311 53 0 chr10 107498289 107498421 -32818344 - L1MEc LINE L1 -5011 1385 1247 750 97 0 35 chr10 107498439 107498552 -32818213 - AluY SINE Alu -9 302 194 276 149 0 0 chr10 107498554 107498601 -32818164 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 928 95 116 0 chr10 107498607 107498754 -32818011 + L1PB4 LINE L1 5993 6156 0 2252 105 23 0 chr10 107498870 107499176 -32817589 - AluSq SINE Alu 0 313 1 346 196 225 36 chr10 107499369 107499507 -32817258 + L2 LINE L2 3102 3265 -48 1860 152 3 13 chr10 107500294 107500609 -32816156 + AluJb SINE Alu 1 312 0 638 239 51 35 chr10 107500868 107501123 -32815642 - MIR SINE MIR 0 262 4 184 274 0 0 chr10 107501186 107501248 -32815517 + MIR SINE MIR 200 261 -1 2202 104 3 0 chr10 107501563 107501860 -32814905 + AluY SINE Alu 1 298 -13 2090 129 3 0 chr10 107501899 107502194 -32814571 + AluSx SINE Alu 1 296 -16 2054 136 0 29 chr10 107502194 107502503 -32814262 + AluSg1 SINE Alu 1 300 -9 2012 121 20 10 chr10 107503005 107503310 -32813455 + AluSg SINE Alu 1 308 -2 279 186 14 29 chr10 107503463 107503533 -32813232 + MIR3 SINE MIR 113 181 -27 249 227 0 30 chr10 107503572 107503638 -32813127 + Charlie8 DNA MER1_type 54 117 -2300 1929 125 34 34 chr10 107503650 107503945 -32812820 + AluSx SINE Alu 1 295 -17 2488 78 0 0 chr10 107504256 107504562 -32812203 + AluSc SINE Alu 1 306 -3 2310 73 28 3 chr10 107504613 107504900 -32811865 - AluSx SINE Alu -18 294 1 2079 71 4 0 chr10 107504924 107505176 -32811589 - AluSq SINE Alu -2 311 59 327 255 113 49 chr10 107505405 107505609 -32811156 - MIR SINE MIR 0 262 46 268 128 64 0 chr10 107505734 107505781 -32810984 - L2 LINE L2 -3 3269 3220 2260 80 38 0 chr10 107506044 107506332 -32810433 + AluSp SINE Alu 1 299 -14 25 31 0 0 chr10 107508042 107508074 -32808691 + GC_rich Low_complexity Low_complexity 1 32 0 231 158 18 18 chr10 107508213 107508270 -32808495 + (CCCCG)n Simple_repeat Simple_repeat 3 59 0 606 297 25 17 chr10 107508621 107508857 -32807908 + MIR SINE MIR 15 252 -10 622 304 129 18 chr10 107508967 107509407 -32807358 - L3 LINE CR1 -235 1342 854 2420 99 0 0 chr10 107509558 107509870 -32806895 + AluSx SINE Alu 1 312 0 252 232 192 0 chr10 107509973 107510098 -32806667 + L1ME4a LINE L1 5968 6116 -5 322 185 134 25 chr10 107510156 107510275 -32806490 + L1MB4 LINE L1 5171 5302 -844 2726 45 0 0 chr10 107510279 107510590 -32806175 + AluY SINE Alu 1 311 0 2132 129 0 0 chr10 107510596 107510883 -32805882 + AluSg SINE Alu 24 310 0 244 263 26 0 chr10 107510883 107510959 -32805806 + L1M2 LINE L1 5728 5805 -486 1277 160 0 22 chr10 107510974 107511205 -32805560 + AluJo SINE Alu 87 312 0 2118 134 57 70 chr10 107511340 107511780 -32804985 + L1MD3 LINE L1 7552 7985 -10 430 251 173 28 chr10 107512395 107512650 -32804115 - L2 LINE L2 -23 3290 2999 1939 156 9 29 chr10 107512675 107512990 -32803775 + AluJo SINE Alu 1 309 -3 265 270 0 14 chr10 107512990 107513053 -32803712 + GA-rich Low_complexity Low_complexity 13 76 0 1587 137 63 27 chr10 107513644 107513983 -32802782 + L1MB4 LINE L1 5436 5829 -339 1825 152 35 0 chr10 107513983 107514272 -32802493 + AluSx SINE Alu 1 299 -13 1587 137 63 27 chr10 107514272 107514318 -32802447 + L1MB4 LINE L1 5829 5872 -296 932 139 70 0 chr10 107514318 107514466 -32802299 + AluSg/x SINE Alu 136 297 -15 1946 150 0 0 chr10 107514466 107514779 -32801986 + L1MB4 LINE L1 5868 6180 0 317 318 98 41 chr10 107514830 107515267 -32801498 + L2 LINE L2 2852 3313 0 2219 95 7 13 chr10 107515366 107515670 -32801095 + AluSg SINE Alu 1 302 -8 2301 116 0 0 chr10 107515863 107516165 -32800600 - AluSx SINE Alu -10 302 1 2198 120 0 37 chr10 107516458 107516782 -32799983 + AluSx SINE Alu 1 312 0 2341 83 3 17 chr10 107517242 107517542 -32799223 + AluSq SINE Alu 3 298 -15 282 226 16 0 chr10 107517586 107517648 -32799117 - MLT1L LTR MaLR -8 607 545 1598 199 0 10 chr10 107517716 107518018 -32798747 + AluJb SINE Alu 1 299 -13 238 286 24 36 chr10 107518267 107518351 -32798414 - MLT1L LTR MaLR -532 83 1 2163 133 0 0 chr10 107518457 107518759 -32798006 - AluJb SINE Alu -10 302 1 1753 154 3 63 chr10 107519122 107519269 -32797496 + AluJo SINE Alu 1 155 -157 2396 92 0 16 chr10 107519269 107519583 -32797182 + AluSc SINE Alu 1 309 0 1753 154 3 63 chr10 107519583 107519766 -32796999 + AluJo SINE Alu 155 311 -1 374 344 44 19 chr10 107519982 107520142 -32796623 - MER5A DNA MER1_type 0 189 26 2544 115 60 23 chr10 107520545 107520979 -32795786 + LTR7 LTR ERV1 1 450 0 14544 180 16 30 chr10 107520979 107523431 -32793334 + HERVH LTR ERV1 1 2487 -5226 2482 68 0 26 chr10 107523431 107523741 -32793024 - AluY SINE Alu -9 302 1 14544 180 16 30 chr10 107523741 107526503 -32790262 + HERVH LTR ERV1 2487 4999 -2714 2087 64 64 11 chr10 107526503 107526783 -32789982 + AluY SINE Alu 1 295 -16 14544 180 16 30 chr10 107526783 107527784 -32788981 + HERVH LTR ERV1 4999 6013 -1700 3666 96 11 7 chr10 107527780 107528335 -32788430 + HERVH LTR ERV1 7157 7713 0 * 2211 127 56 16 chr10 107528335 107528761 -32788004 + LTR7 LTR ERV1 1 443 -7 1823 186 98 46 chr10 107529005 107529483 -32787282 + MLT1D LTR MaLR 3 505 0 1334 72 6 0 chr10 107529569 107529736 -32787029 - AluY SINE Alu -8 303 136 2781 35 0 0 chr10 107529736 107530046 -32786719 - AluYa5 SINE Alu -1 310 1 333 119 0 3 chr10 107530283 107530510 -32786255 + AluSx SINE Alu 1 283 -17 216 0 0 0 chr10 107530513 107530537 -32786228 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1272 126 20 0 chr10 107530537 107530735 -32786030 - MER4D LTR ERV1 -12 891 690 2424 85 0 0 chr10 107532414 107532709 -32784056 + AluY SINE Alu 1 295 -16 2473 80 0 3 chr10 107532734 107533033 -32783732 + AluY SINE Alu 1 298 -13 4187 123 25 31 chr10 107533276 107533991 -32782774 - MER4D LTR ERV1 -192 711 1 4143 159 8 32 chr10 107533991 107534155 -32782610 - MER4D LTR ERV1 -142 761 594 2358 111 0 0 chr10 107534155 107534453 -32782312 + AluSx SINE Alu 1 298 -14 4143 159 8 32 chr10 107534453 107534513 -32782252 - MER4D LTR ERV1 -309 594 534 2372 85 7 0 chr10 107534513 107534807 -32781958 + AluY SINE Alu 1 296 -15 216 0 0 0 chr10 107534808 107534832 -32781933 + (TA)n Simple_repeat Simple_repeat 1 24 0 4143 159 8 32 chr10 107534832 107535382 -32781383 - MER4D LTR ERV1 -368 535 3 355 237 10 72 chr10 107535388 107535485 -32781280 - L1MC4 LINE L1 -1339 6703 6613 383 214 20 41 chr10 107535494 107535592 -32781173 - L1MC4 LINE L1 -1333 6709 6614 274 119 60 0 chr10 107535598 107535682 -32781083 + (TA)n Simple_repeat Simple_repeat 1 89 0 333 0 0 0 chr10 107535682 107535719 -32781046 + (CA)n Simple_repeat Simple_repeat 2 38 0 1056 177 22 6 chr10 107535732 107535913 -32780852 + AluJb SINE Alu 129 312 0 205 176 0 0 chr10 107535916 107535950 -32780815 + GA-rich Low_complexity Low_complexity 3 36 0 411 201 8 157 chr10 107535962 107536023 -32780742 - L1ME3 LINE L1 -66 6096 6028 1629 208 0 22 chr10 107536023 107536340 -32780425 + AluJo SINE Alu 1 310 -2 411 201 8 157 chr10 107536340 107536527 -32780238 - L1ME3 LINE L1 -134 6028 5885 654 136 29 0 chr10 107536527 107536630 -32780135 - AluSp/q SINE Alu -6 307 202 339 165 204 0 chr10 107536630 107536733 -32780032 - L1ME3 LINE L1 -278 5892 5769 2083 133 0 41 chr10 107536742 107536887 -32779878 + AluSq SINE Alu 1 150 -163 2367 97 0 0 chr10 107536887 107537176 -32779589 + AluSc SINE Alu 1 289 -20 2083 133 0 41 chr10 107537176 107537345 -32779420 + AluSq SINE Alu 150 302 -11 314 136 0 0 chr10 107537345 107537389 -32779376 + AluSp SINE Alu 134 177 -126 1635 99 121 11 chr10 107537403 107537675 -32779090 + MSTA LTR MaLR 127 428 0 790 115 255 0 chr10 107537675 107537832 -32778933 - MSTA LTR MaLR -231 197 1 9195 151 24 62 chr10 107537832 107538145 -32778620 - MSTA-int LTR MaLR 0 1651 1328 2004 108 3 67 chr10 107538145 107538459 -32778306 - AluSg SINE Alu -16 294 1 9195 151 24 62 chr10 107538459 107539862 -32776903 - MSTA-int LTR MaLR -323 1328 1 1969 139 103 64 chr10 107539862 107540083 -32776682 - MSTA LTR MaLR 0 428 217 2316 108 0 0 chr10 107540083 107540380 -32776385 - AluSg SINE Alu -13 297 1 1969 139 103 64 chr10 107540380 107540396 -32776369 - MSTA LTR MaLR -211 217 203 2410 92 0 3 chr10 107540396 107540702 -32776063 - AluY SINE Alu -6 305 1 1969 139 103 64 chr10 107540702 107540872 -32775893 - MSTA LTR MaLR -225 203 4 1766 161 3 21 chr10 107540872 107541158 -32775607 + AluJb SINE Alu 17 297 -15 2897 136 181 26 chr10 107541158 107541497 -32775268 + Tigger1 DNA MER2_type 1584 1869 -549 1883 176 0 0 chr10 107541497 107541787 -32774978 + AluJb SINE Alu 6 295 -17 2897 136 181 26 chr10 107541787 107541810 -32774955 + Tigger1 DNA MER2_type 1869 1887 -531 2160 120 3 20 chr10 107541810 107542110 -32774655 + AluSx SINE Alu 2 296 -16 2897 136 181 26 chr10 107542110 107542182 -32774583 + Tigger1 DNA MER2_type 1887 1946 -472 2143 102 4 0 chr10 107542182 107542456 -32774309 + AluSq SINE Alu 1 275 -38 2897 136 181 26 chr10 107542456 107542741 -32774024 + Tigger1 DNA MER2_type 1946 2417 -1 313 250 50 40 chr10 107543016 107543116 -32773649 - L1MC4 LINE L1 -1334 6708 6608 776 214 19 7 chr10 107543439 107543593 -32773172 + MIR SINE MIR 2 157 -105 2020 139 13 3 chr10 107543619 107543920 -32772845 + AluSx SINE Alu 3 306 -6 2173 115 0 3 chr10 107543920 107544206 -32772559 + AluSq SINE Alu 1 285 -28 351 0 0 0 chr10 107544206 107544245 -32772520 + (CA)n Simple_repeat Simple_repeat 2 40 0 2348 97 0 0 chr10 107544571 107544871 -32771894 - AluSx SINE Alu -8 304 5 2428 48 0 51 chr10 107545231 107545545 -32771220 - AluY SINE Alu -13 298 1 246 345 43 17 chr10 107545668 107545784 -32770981 + MIR SINE MIR 32 150 -58 1496 146 69 56 chr10 107545948 107546236 -32770529 + AluJo SINE Alu 1 292 -20 633 231 0 8 chr10 107546604 107546725 -32770040 + MER5B DNA MER1_type 3 122 -56 1835 139 3 48 chr10 107546726 107547035 -32769730 - AluSg SINE Alu -10 300 6 1100 88 0 7 chr10 107547037 107547174 -32769591 - AluSc SINE Alu -173 136 1 302 190 17 0 chr10 107547177 107547235 -32769530 + MER5B DNA MER1_type 118 176 -2 359 295 208 17 chr10 107547349 107547522 -32769243 - MIR SINE MIR -3 259 54 342 299 99 94 chr10 107547544 107547670 -32769095 - L2 LINE L2 -79 3193 3069 2133 97 0 0 chr10 107547670 107547939 -32768826 + AluSg1 SINE Alu 24 292 -17 261 0 0 0 chr10 107547939 107547968 -32768797 + (TTAAA)n Simple_repeat Simple_repeat 2 30 0 342 299 99 94 chr10 107547968 107548224 -32768541 - L2 LINE L2 -202 3070 2808 1839 159 19 16 chr10 107548323 107548631 -32768134 + AluJb SINE Alu 1 309 -3 3735 144 59 90 chr10 107548646 107548885 -32767880 + L1MB3 LINE L1 5095 5340 -843 2205 121 0 0 chr10 107548885 107549182 -32767583 + AluSx SINE Alu 1 297 -15 3735 144 59 90 chr10 107549182 107549539 -32767226 + L1MB3 LINE L1 5340 5707 -476 2264 121 0 34 chr10 107549539 107549862 -32766903 + AluSx SINE Alu 1 312 0 3735 144 59 90 chr10 107549862 107550169 -32766596 + L1MB3 LINE L1 5707 6022 -161 2175 126 3 10 chr10 107550169 107550479 -32766286 + AluSq SINE Alu 1 308 -5 3735 144 59 90 chr10 107550479 107550578 -32766187 + L1MB3 LINE L1 6022 6068 -115 2375 78 7 0 chr10 107550578 107550871 -32765894 + AluY SINE Alu 1 295 -16 3735 144 59 90 chr10 107550871 107550983 -32765782 + L1MB3 LINE L1 6068 6182 -1 985 118 0 21 chr10 107550988 107551132 -32765633 + FLAM_C SINE Alu 1 141 -2 575 310 121 39 chr10 107551163 107551550 -32765215 - L2 LINE L2 -634 2680 2262 2489 50 0 13 chr10 107551555 107551857 -32764908 - AluY SINE Alu -13 298 1 253 316 0 0 chr10 107551942 107552018 -32764747 + L1MC5 LINE L1 7810 7885 -76 235 318 45 11 chr10 107552121 107552209 -32764556 - MIR SINE MIR -3 259 169 1615 200 0 28 chr10 107552386 107552676 -32764089 + AluJo SINE Alu 1 282 -30 2543 69 0 0 chr10 107552676 107552979 -32763786 - AluY SINE Alu -8 303 1 1969 147 0 14 chr10 107553022 107553314 -32763451 + AluSx SINE Alu 17 304 -8 330 317 166 46 chr10 107553334 107553435 -32763330 - L2 LINE L2 -1292 2022 1934 2297 80 0 14 chr10 107553435 107553751 -32763014 + AluSq SINE Alu 1 312 0 330 317 166 46 chr10 107553751 107554125 -32762640 - L2 LINE L2 -1380 1934 1489 2225 134 0 3 chr10 107554613 107554792 -32761973 - AluJo SINE Alu 0 312 133 2265 97 0 20 chr10 107554792 107555090 -32761675 - AluSc SINE Alu -17 292 1 2225 134 0 3 chr10 107555090 107555223 -32761542 - AluJo SINE Alu -179 133 1 329 0 24 0 chr10 107555261 107555302 -32761463 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 371 332 88 67 chr10 107555304 107555587 -32761178 - L2 LINE L2 -16 3256 2968 316 260 75 130 chr10 107555646 107555846 -32760919 - MER5A DNA MER1_type 0 189 1 2398 99 0 0 chr10 107555905 107556208 -32760557 - AluSx SINE Alu -9 303 1 270 217 98 43 chr10 107557035 107557127 -32759638 + MIR3 SINE MIR 60 156 -52 2288 94 3 10 chr10 107557281 107557579 -32759186 - AluSx SINE Alu -1 311 16 847 248 59 35 chr10 107557651 107557905 -32758860 - MIR SINE MIR 0 262 3 2312 89 0 0 chr10 107558035 107558347 -32758418 - AluSg SINE Alu 0 312 1 182 309 63 16 chr10 107558352 107558478 -32758287 + MIR SINE MIR 129 260 -2 770 111 0 144 chr10 107558511 107558558 -32758207 - L1MB3 LINE L1 0 6183 6131 2257 108 3 0 chr10 107558558 107558853 -32757912 + AluSp SINE Alu 2 297 -16 770 111 0 144 chr10 107558853 107558864 -32757901 - L1MB3 LINE L1 -52 6131 6120 1791 148 36 4 chr10 107558864 107559141 -32757624 + AluJo SINE Alu 1 286 -26 2059 119 7 3 chr10 107559143 107559437 -32757328 + AluSq SINE Alu 1 295 -18 770 111 0 144 chr10 107559437 107559554 -32757211 - L1MB3 LINE L1 -64 6119 6030 221 314 120 31 chr10 107559676 107559867 -32756898 + MIR SINE MIR 47 254 -8 2201 117 3 0 chr10 107560302 107560600 -32756165 - AluSx SINE Alu -13 299 1 1907 170 13 0 chr10 107560690 107560996 -32755769 - AluJb SINE Alu -2 310 1 328 301 67 48 chr10 107562497 107562706 -32754059 + MIR SINE MIR 49 261 -1 456 274 21 65 chr10 107562917 107563103 -32753662 - MIR SINE MIR -36 226 49 318 310 11 64 chr10 107563110 107563297 -32753468 + MER117 DNA MER1_type 16 192 -5 1513 155 0 0 chr10 107563376 107563602 -32753163 + AluJb SINE Alu 85 310 -2 379 272 89 49 chr10 107563621 107563845 -32752920 + MIR SINE MIR 24 256 -6 1649 132 37 40 chr10 107563859 107564131 -32752634 - AluSx SINE Alu -41 271 1 254 265 73 37 chr10 107564131 107564267 -32752498 + L1ME LINE L1 5700 5840 -281 23 54 0 0 chr10 107564296 107564333 -32752432 + AT_rich Low_complexity Low_complexity 1 37 0 1479 109 9 33 chr10 107564684 107564895 -32751870 - AluJb SINE Alu -20 292 87 191 154 0 19 chr10 107565205 107565257 -32751508 + A-rich Low_complexity Low_complexity 2 52 0 992 194 6 0 chr10 107565385 107565550 -32751215 - FRAM SINE Alu 0 166 1 755 173 0 6 chr10 107565983 107566162 -32750603 + (CCA)n Simple_repeat Simple_repeat 3 180 0 1254 112 194 63 chr10 107566766 107566900 -32749865 + AluSq SINE Alu 1 116 -187 2395 99 3 0 chr10 107566900 107567203 -32749562 + AluSg SINE Alu 1 304 -6 1254 112 194 63 chr10 107567203 107567304 -32749461 + AluSq SINE Alu 116 202 -101 2344 98 7 0 chr10 107567304 107567601 -32749164 - AluSx SINE Alu -13 299 1 1254 112 194 63 chr10 107567601 107567632 -32749133 + AluSq SINE Alu 202 303 0 515 219 140 82 chr10 107568478 107568757 -32748008 - MER102a DNA MER1_type -10 320 26 21 0 0 0 chr10 107569697 107569718 -32747047 + GC_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr10 107571299 107571338 -32745427 + (CA)n Simple_repeat Simple_repeat 1 39 0 413 259 117 19 chr10 107573712 107573874 -32742891 - MER5A DNA MER1_type -1 188 11 244 180 40 0 chr10 107575320 107575370 -32741395 - MIR SINE MIR 0 262 211 202 184 26 0 chr10 107575555 107575593 -32741172 - MIR SINE MIR -130 78 40 2241 77 0 55 chr10 107576148 107576473 -32740292 - AluSq SINE Alu -6 307 1 763 156 0 0 chr10 107576513 107576635 -32740130 - AluSg/x SINE Alu -13 297 176 276 154 0 0 chr10 107576635 107576674 -32740091 - AluS SINE Alu -237 66 28 457 255 148 34 chr10 107576677 107576826 -32739939 + MER20 DNA MER1_type 54 219 0 23 0 0 0 chr10 107576941 107576964 -32739801 + AT_rich Low_complexity Low_complexity 1 23 0 2181 98 0 3 chr10 107576980 107577285 -32739480 + AluSq SINE Alu 1 304 -9 455 222 10 0 chr10 107577285 107577384 -32739381 - L1MD3 LINE L1 -347 7648 7549 2115 134 3 0 chr10 107577385 107577690 -32739075 - AluSx SINE Alu -6 306 1 1679 191 124 177 chr10 107577697 107578097 -32738668 - L1M4c LINE L1 -4167 2479 2059 2163 117 0 7 chr10 107578097 107578406 -32738359 - AluSx SINE Alu -5 307 1 1679 191 124 177 chr10 107578406 107578798 -32737967 - L1M4c LINE L1 -4587 2059 1648 1749 146 19 53 chr10 107578798 107579121 -32737644 - AluJb SINE Alu 0 312 1 1395 189 19 26 chr10 107579124 107579431 -32737334 - AluJo SINE Alu -7 305 1 725 183 8 23 chr10 107579433 107579564 -32737201 - FLAM_A SINE Alu -4 129 1 1679 191 124 177 chr10 107579564 107579928 -32736837 - L1M4c LINE L1 -5001 1645 1377 1567 228 39 23 chr10 107579961 107580347 -32736418 - L1M4c LINE L1 -5801 741 350 1219 199 94 85 chr10 107580338 107580651 -32736114 - L1M4c LINE L1 -6131 411 91 * 2178 72 0 4 chr10 107580651 107580965 -32735800 - AluSc SINE Alu 0 313 1 1219 199 94 85 chr10 107580965 107581052 -32735713 - L1M4c LINE L1 -6451 91 6 659 173 0 0 chr10 107581057 107581167 -32735598 - L1MD3 LINE L1 -496 7499 7390 1089 218 0 0 chr10 107581167 107581360 -32735405 + MER58A DNA MER1_type 2 194 -30 544 227 9 0 chr10 107581381 107581491 -32735274 - MLT1F1 LTR MaLR -451 116 6 758 191 46 0 chr10 107581493 107581645 -32735120 - L1MD3 LINE L1 -717 7278 7120 1155 140 0 0 chr10 107581646 107581824 -32734941 - AluSg/x SINE Alu 0 312 135 2152 103 0 3 chr10 107581824 107582125 -32734640 - AluSx SINE Alu -11 301 2 321 298 48 10 chr10 107582263 107582367 -32734398 + MIR SINE MIR 77 184 -78 180 217 0 0 chr10 107582433 107582479 -32734286 + CT-rich Low_complexity Low_complexity 4 49 0 2298 79 0 13 chr10 107582843 107583148 -32733617 - AluSq SINE Alu -12 301 1 2160 130 72 17 chr10 107583195 107583540 -32733225 + THE1B LTR MaLR 1 364 0 11603 95 7 16 chr10 107583540 107584819 -32731946 + THE1B-int LTR MaLR 1 1291 -289 2155 83 0 0 chr10 107584819 107585097 -32731668 + AluY SINE Alu 1 278 -33 198 0 0 0 chr10 107585097 107585119 -32731646 + (CA)n Simple_repeat Simple_repeat 1 22 0 11603 95 7 16 chr10 107585119 107585433 -32731332 + THE1B-int LTR MaLR 1289 1580 0 2006 131 104 18 chr10 107585433 107585768 -32730997 + THE1B LTR MaLR 1 364 0 1667 167 0 31 chr10 107586018 107586334 -32730431 - AluJb SINE Alu 0 307 1 390 287 19 9 chr10 107586550 107586658 -32730107 - MIR3 SINE MIR -30 178 70 407 272 49 49 chr10 107586658 107586959 -32729806 - MLT1J2 LTR MaLR 0 450 66 2009 111 26 13 chr10 107587212 107587518 -32729247 + AluSx SINE Alu 1 310 -2 2186 121 0 0 chr10 107588470 107588775 -32727990 + AluSx SINE Alu 1 305 -7 1727 181 44 3 chr10 107588780 107589123 -32727642 + L1MB4 LINE L1 5823 6179 -1 614 253 59 12 chr10 107589143 107589313 -32727452 + MIR SINE MIR 14 191 -71 1645 179 0 28 chr10 107589362 107589681 -32727084 + AluJb SINE Alu 1 310 -2 190 351 53 0 chr10 107590223 107590280 -32726485 + L3b LINE CR1 1512 1571 -12 247 260 0 0 chr10 107590448 107590498 -32726267 + polypurine Low_complexity Low_complexity 1 50 0 2150 87 3 0 chr10 107590695 107590982 -32725783 - AluSc SINE Alu -21 288 1 1928 129 0 23 chr10 107591483 107591835 -32724930 - AluSx SINE Alu 0 355 11 236 293 53 15 chr10 107591944 107592077 -32724688 + L1MC/D LINE L1 5767 5904 -1904 23 0 0 0 chr10 107592091 107592114 -32724651 + AT_rich Low_complexity Low_complexity 1 23 0 216 239 0 0 chr10 107592167 107592213 -32724552 + L2 LINE L2 3221 3266 -6 246 185 148 19 chr10 107592352 107592406 -32724359 + tRNA-Phe-TTC tRNA tRNA 8 68 -8 1922 125 0 17 chr10 107592481 107592616 -32724149 + AluSx SINE Alu 1 137 -175 1867 112 84 0 chr10 107592616 107592901 -32723864 + AluSq SINE Alu 1 309 -4 1922 125 0 17 chr10 107592901 107593062 -32723703 + AluSx SINE Alu 137 292 -20 548 241 33 95 chr10 107593076 107593317 -32723448 - L1MC4 LINE L1 0 8042 7817 3838 201 59 73 chr10 107593325 107594066 -32722699 - L1MD2 LINE L1 -2 6357 5606 1777 153 0 20 chr10 107594066 107594367 -32722398 - AluSx SINE Alu -17 295 1 3838 201 59 73 chr10 107594367 107594712 -32722053 - L1MD2 LINE L1 -753 5606 5257 2329 78 0 7 chr10 107594712 107595018 -32721747 - AluSx SINE Alu -8 304 1 3838 201 59 73 chr10 107595018 107595092 -32721673 - L1MD2 LINE L1 -1102 5257 5183 1606 109 134 25 chr10 107595092 107595368 -32721397 - AluSg SINE Alu -4 306 1 2333 70 3 0 chr10 107595378 107595677 -32721088 - AluY SINE Alu -11 300 1 3838 201 59 73 chr10 107595677 107595785 -32720980 - L1MD2 LINE L1 -1185 5174 5090 183 80 0 0 chr10 107595918 107595943 -32720822 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 994 174 19 0 chr10 107595951 107596106 -32720659 - FAM SINE Alu -17 158 1 315 331 107 0 chr10 107596369 107596538 -32720227 - L2 LINE L2 -908 2406 2220 399 337 46 31 chr10 107596574 107596770 -32719995 + L2 LINE L2 3115 3313 0 248 359 29 19 chr10 107596788 107596891 -32719874 - MIR SINE MIR -2 260 157 268 297 119 10 chr10 107596895 107596996 -32719769 - MER5B DNA MER1_type -65 113 2 1957 130 0 0 chr10 107597169 107597509 -32719256 - AluSq SINE Alu 0 340 1 245 241 83 42 chr10 107598235 107598367 -32718398 - MIR SINE MIR -50 212 20 2182 79 14 0 chr10 107598451 107598742 -32718023 - AluSp SINE Alu -18 295 1 1934 114 3 42 chr10 107599276 107599584 -32717181 + AluSg SINE Alu 1 296 -14 2183 75 3 33 chr10 107599936 107600241 -32716524 + AluSg SINE Alu 1 296 -14 826 108 0 8 chr10 107600241 107600361 -32716404 + AluSg/x SINE Alu 132 250 -59 2181 92 0 3 chr10 107600471 107600764 -32716001 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 107600774 107600803 -32715962 + AT_rich Low_complexity Low_complexity 1 29 0 388 338 13 40 chr10 107600873 107601024 -32715741 - MER5A DNA MER1_type -3 186 40 2177 108 0 19 chr10 107601050 107601366 -32715399 + AluSg SINE Alu 1 310 0 351 136 0 45 chr10 107601366 107601432 -32715333 - L1PA16 LINE L1 -10 6156 6094 525 135 0 0 chr10 107601435 107601509 -32715256 + AluS SINE Alu 2 75 -237 1709 112 0 24 chr10 107601609 107601858 -32714907 + AluSg SINE Alu 50 292 -18 308 139 128 23 chr10 107601865 107601901 -32714864 + L1MC4a LINE L1 5903 5934 -1874 2328 88 7 0 chr10 107601901 107602209 -32714556 + AluSp SINE Alu 1 310 -3 2208 109 0 3 chr10 107602209 107602567 -32714198 + AluSx SINE Alu 1 312 0 308 139 128 23 chr10 107602567 107602615 -32714150 + L1MC4a LINE L1 5933 5997 -1811 689 204 174 45 chr10 107602626 107602746 -32714019 + L1MC4a LINE L1 6051 6154 -1654 1743 144 6 10 chr10 107602746 107603058 -32713707 + AluY SINE Alu 1 311 0 297 0 0 0 chr10 107603058 107603091 -32713674 + (TA)n Simple_repeat Simple_repeat 2 34 0 689 204 174 45 chr10 107603091 107603233 -32713532 + L1MC4a LINE L1 6153 6348 -1460 300 236 0 0 chr10 107603236 107603291 -32713474 + Tigger6 DNA MER2_type 1 55 -1542 1657 98 4 4 chr10 107603395 107603629 -32713136 + AluSg/x SINE Alu 66 299 -13 1700 110 121 11 chr10 107603631 107604062 -32712703 + AluSx SINE Alu 1 461 0 963 316 127 28 chr10 107604077 107604239 -32712526 - L3 LINE CR1 -32 1545 1401 2010 141 0 0 chr10 107604239 107604537 -32712228 + AluSx SINE Alu 1 298 -14 963 316 127 28 chr10 107604537 107604916 -32711849 - L3 LINE CR1 -176 1401 950 1095 225 10 48 chr10 107605164 107605457 -32711308 - L1MC/D LINE L1 -2153 5655 5374 1248 170 0 90 chr10 107605483 107605772 -32710993 - AluJb SINE Alu -14 298 36 1216 175 0 0 chr10 107605774 107605985 -32710780 - AluJb SINE Alu -17 295 85 1878 120 3 7 chr10 107606125 107606409 -32710356 - AluSx SINE Alu -1 311 29 1959 131 3 16 chr10 107606680 107606817 -32709948 + AluSp SINE Alu 1 138 -175 2718 16 0 0 chr10 107606817 107607126 -32709639 + AluYa5 SINE Alu 1 309 -2 1959 131 3 16 chr10 107607126 107607294 -32709471 + AluSp SINE Alu 138 302 -11 2214 83 3 10 chr10 107607296 107607598 -32709167 + AluY SINE Alu 1 300 -11 1939 103 0 7 chr10 107607623 107607895 -32708870 + AluSq SINE Alu 5 274 -39 1703 154 0 11 chr10 107608060 107608346 -32708419 + AluJb SINE Alu 1 283 -29 225 83 0 0 chr10 107608400 107608436 -32708329 + (A)n Simple_repeat Simple_repeat 1 36 0 2131 90 7 0 chr10 107608825 107609114 -32707651 - AluSq SINE Alu -20 293 3 1702 156 28 7 chr10 107609118 107609407 -32707358 - AluSx SINE Alu -17 295 1 1908 152 3 0 chr10 107609452 107609761 -32707004 - AluSx SINE Alu -2 310 1 2209 112 0 0 chr10 107610016 107610328 -32706437 - AluSx SINE Alu 0 312 1 227 211 88 0 chr10 107610328 107610385 -32706380 - L1ME3 LINE L1 -31 6131 6070 1471 162 94 0 chr10 107610846 107611111 -32705654 + AluJb SINE Alu 6 295 -17 1813 106 7 43 chr10 107611219 107611521 -32705244 + AluSq SINE Alu 3 293 -20 491 68 0 0 chr10 107611521 107611580 -32705185 + (CA)n Simple_repeat Simple_repeat 2 60 0 1650 167 9 57 chr10 107611594 107611912 -32704853 + AluSg SINE Alu 1 303 -7 230 56 28 0 chr10 107611912 107611948 -32704817 + (TA)n Simple_repeat Simple_repeat 2 38 0 326 316 11 11 chr10 107611964 107612059 -32704706 - MIR3 SINE MIR -102 106 12 2214 93 0 0 chr10 107612570 107612859 -32703906 + AluSg SINE Alu 1 289 -21 773 179 97 0 chr10 107613407 107613541 -32703224 + FRAM SINE Alu 1 146 -30 218 32 32 0 chr10 107613545 107613576 -32703189 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 278 277 0 0 chr10 107613586 107613651 -32703114 + MIR SINE MIR 2 66 -196 2000 124 50 0 chr10 107613654 107613952 -32702813 + AluSq SINE Alu 1 313 0 751 242 61 6 chr10 107613976 107614141 -32702624 + MIR SINE MIR 57 230 -32 207 323 15 0 chr10 107614430 107614495 -32702270 - L3 LINE CR1 -159 1418 1353 237 65 0 0 chr10 107615066 107615097 -32701668 + (TG)n Simple_repeat Simple_repeat 2 32 0 1412 173 0 4 chr10 107615554 107615797 -32700968 + AluSx SINE Alu 1 242 -70 1375 152 30 81 chr10 107615916 107616071 -32700694 - AluJo SINE Alu -31 281 147 2263 90 0 0 chr10 107616071 107616370 -32700395 - AluY SINE Alu -12 299 1 1375 152 30 81 chr10 107616370 107616510 -32700255 - AluJo SINE Alu -165 147 1 243 0 0 0 chr10 107616680 107616707 -32700058 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr10 107616706 107616726 -32700039 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 279 0 0 0 chr10 107616725 107616756 -32700009 + (GA)n Simple_repeat Simple_repeat 2 32 0 553 303 87 14 chr10 107617083 107617301 -32699464 - MIR SINE MIR 0 262 29 669 216 0 0 chr10 107617330 107617446 -32699319 - MER58B DNA MER1_type 0 341 226 226 200 133 0 chr10 107617567 107617612 -32699153 + MER58 DNA MER1_type 4 54 -2366 185 65 32 0 chr10 107617706 107617737 -32699028 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1890 114 0 0 chr10 107617746 107618010 -32698755 - AluSx SINE Alu -36 276 13 2249 79 0 10 chr10 107618324 107618628 -32698137 + AluSx SINE Alu 1 301 -11 402 284 64 98 chr10 107618765 107618905 -32697860 + MIR SINE MIR 32 162 -100 635 137 145 8 chr10 107618905 107619022 -32697743 + FLAM_A SINE Alu 1 133 0 402 284 64 98 chr10 107619022 107619117 -32697648 + MIR SINE MIR 162 259 -3 206 295 0 38 chr10 107619414 107619519 -32697246 + (CGG)n Simple_repeat Simple_repeat 2 102 0 26 50 0 0 chr10 107619545 107619585 -32697180 + GC_rich Low_complexity Low_complexity 1 40 0 2292 95 0 0 chr10 107620327 107620623 -32696142 - AluSx SINE Alu -16 296 1 365 121 0 45 chr10 107620625 107620691 -32696074 + L1PA16 LINE L1 6094 6156 -10 2394 93 0 6 chr10 107620691 107621004 -32695761 - AluY SINE Alu 0 311 1 412 281 107 33 chr10 107621472 107621714 -32695051 - L2 LINE L2 -209 3063 2804 272 224 92 0 chr10 107621813 107621889 -32694876 - MLT1J LTR MaLR 0 511 429 759 284 64 5 chr10 107621919 107622356 -32694409 - MLT1J LTR MaLR -7 504 1 455 215 148 101 chr10 107622487 107622551 -32694214 + MER20 DNA MER1_type 1 60 -159 1917 139 30 10 chr10 107622551 107622853 -32693912 + AluSx SINE Alu 1 308 -4 455 215 148 101 chr10 107622853 107622997 -32693768 + MER20 DNA MER1_type 60 219 0 256 299 221 28 chr10 107623047 107623481 -32693284 - L2 LINE L2 -809 2505 1988 1366 107 0 0 chr10 107623483 107623651 -32693114 + AluSq SINE Alu 1 168 -145 413 308 200 18 chr10 107624054 107624548 -32692217 - L2 LINE L2 -375 2939 2356 2195 118 0 0 chr10 107624553 107624840 -32691925 - AluSx SINE Alu -25 287 1 2298 118 0 0 chr10 107624845 107625150 -32691615 - AluSx SINE Alu -7 305 1 534 282 26 10 chr10 107625151 107625346 -32691419 - L2 LINE L2 -1342 1972 1775 2082 124 31 0 chr10 107625957 107626247 -32690518 - AluSq SINE Alu -14 299 1 1162 154 0 11 chr10 107626383 107626565 -32690200 - AluJo SINE Alu -132 180 1 2021 101 52 14 chr10 107626567 107626853 -32689912 - AluSx SINE Alu -15 297 1 2196 113 31 0 chr10 107626856 107627148 -32689617 - AluSx SINE Alu -11 301 1 1343 102 0 0 chr10 107628544 107628711 -32688054 - AluSg/x SINE Alu -16 296 130 194 88 0 29 chr10 107628711 107628745 -32688020 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2056 138 0 0 chr10 107628748 107629044 -32687721 - AluSx SINE Alu -16 296 1 1557 164 58 7 chr10 107629060 107629334 -32687431 - AluJb SINE Alu -14 298 11 1346 157 22 60 chr10 107629408 107629676 -32687089 - AluJo SINE Alu -54 258 1 2182 109 3 0 chr10 107629681 107629974 -32686791 - AluSx SINE Alu -18 294 1 807 132 0 16 chr10 107630169 107630290 -32686475 + AluJb SINE Alu 1 119 -193 25 0 0 0 chr10 107630290 107630315 -32686450 + AT_rich Low_complexity Low_complexity 1 25 0 1980 142 10 3 chr10 107630751 107631054 -32685711 + AluSx SINE Alu 3 307 -5 2245 75 41 0 chr10 107631056 107631349 -32685416 + AluY SINE Alu 1 305 -6 2199 95 18 0 chr10 107631351 107631634 -32685131 + AluSq SINE Alu 1 288 -25 2293 91 3 3 chr10 107631784 107632070 -32684695 + AluSx SINE Alu 1 286 -26 2188 104 17 3 chr10 107632080 107632378 -32684387 + AluSc SINE Alu 2 303 -6 751 247 94 8 chr10 107632443 107632678 -32684087 - MIR SINE MIR -7 255 1 2126 102 7 11 chr10 107633149 107633457 -32683308 + AluY SINE Alu 1 307 0 417 144 56 33 chr10 107633469 107633559 -32683206 - L1MC5 LINE L1 -44 7917 7826 347 215 78 84 chr10 107633605 107633796 -32682969 - L1MC5 LINE L1 -298 7663 7474 2301 102 6 10 chr10 107633805 107634119 -32682646 - AluSp SINE Alu 0 313 1 2300 59 42 14 chr10 107634717 107635006 -32681759 - AluY SINE Alu -12 299 3 1493 191 7 43 chr10 107635083 107635387 -32681378 - AluJo SINE Alu -19 293 1 1914 129 16 16 chr10 107635653 107635964 -32680801 - AluSq SINE Alu -2 311 1 616 296 60 17 chr10 107636566 107636799 -32679966 - MIR SINE MIR 0 262 20 1142 131 86 50 chr10 107636903 107637046 -32679719 - MER30 DNA MER1_type 0 230 75 2075 145 0 0 chr10 107637046 107637349 -32679416 - AluSx SINE Alu -9 303 1 1142 131 86 50 chr10 107637349 107637427 -32679338 - MER30 DNA MER1_type -155 75 1 2393 81 3 0 chr10 107637642 107637952 -32678813 - AluSx SINE Alu -1 311 1 2297 98 3 0 chr10 107638225 107638520 -32678245 - AluY SINE Alu -15 296 1 1978 140 17 0 chr10 107638525 107638825 -32677940 - AluSx SINE Alu -7 305 1 823 216 39 25 chr10 107638986 107639190 -32677575 + AluJb SINE Alu 97 303 -9 2167 125 0 0 chr10 107639190 107639487 -32677278 + AluSx SINE Alu 1 297 -15 715 213 7 7 chr10 107639497 107639633 -32677132 + AluJo SINE Alu 2 137 -175 1587 209 10 10 chr10 107639633 107639934 -32676831 + AluJb SINE Alu 4 304 -8 565 223 145 47 chr10 107640155 107640348 -32676417 - L1ME2 LINE L1 -18 6146 5935 725 104 0 0 chr10 107640381 107640477 -32676288 + AluS SINE Alu 2 97 -216 1597 65 0 35 chr10 107640579 107640780 -32675985 - AluSq SINE Alu -119 194 1 418 285 21 98 chr10 107641320 107641457 -32675308 - MIR SINE MIR -19 243 97 2139 134 0 0 chr10 107641457 107641755 -32675010 + AluSq SINE Alu 2 299 -14 418 285 21 98 chr10 107641755 107641821 -32674944 - MIR SINE MIR -165 97 27 2200 93 10 20 chr10 107641821 107642121 -32674644 + AluSx SINE Alu 1 297 -15 1957 86 3 125 chr10 107642121 107642254 -32674511 + AluSp SINE Alu 2 71 -232 2173 76 0 0 chr10 107642254 107642516 -32674249 + AluSc SINE Alu 1 262 -47 1957 86 3 125 chr10 107642516 107642718 -32674047 + AluSp SINE Alu 71 296 -7 418 285 21 98 chr10 107642718 107642758 -32674007 - MIR SINE MIR -233 29 27 562 277 104 9 chr10 107642771 107642991 -32673774 - MIR SINE MIR -1 261 21 879 183 0 20 chr10 107643618 107643771 -32672994 - AluJb SINE Alu -32 280 131 280 234 0 0 chr10 107644143 107644207 -32672558 + L2 LINE L2 3246 3309 -4 1890 122 56 11 chr10 107644243 107644530 -32672235 - AluSx SINE Alu -8 304 5 2334 98 3 0 chr10 107644961 107645258 -32671507 - AluSx SINE Alu -14 298 1 934 181 16 16 chr10 107645412 107645605 -32671160 - L1ME2 LINE L1 -271 5907 5715 1893 143 3 17 chr10 107645605 107645898 -32670867 - AluSq SINE Alu -24 289 1 755 211 50 106 chr10 107645929 107646145 -32670620 - L1MC5 LINE L1 -389 7572 7378 2264 77 7 7 chr10 107646145 107646432 -32670333 - AluY SINE Alu -24 287 1 755 211 50 106 chr10 107646432 107646537 -32670228 - L1MC5 LINE L1 -583 7378 7269 1619 206 14 0 chr10 107646620 107646916 -32669849 - AluJo SINE Alu -12 300 1 1989 127 7 23 chr10 107647173 107647480 -32669285 + AluSx SINE Alu 1 302 -10 188 260 0 20 chr10 107647631 107647681 -32669084 + L3 LINE CR1 418 466 -1111 1068 142 137 0 chr10 107648575 107648801 -32667964 - L1MA9 LINE L1 0 6312 6056 525 309 30 47 chr10 107649100 107649333 -32667432 - MIR SINE MIR -14 248 20 1462 164 66 59 chr10 107649388 107649693 -32667072 - AluJo SINE Alu -3 309 3 2125 81 7 7 chr10 107649708 107649981 -32666784 - AluSc SINE Alu -15 294 22 1828 42 0 5 chr10 107650081 107650325 -32666440 + AluY SINE Alu 69 311 0 1601 105 64 30 chr10 107650379 107650645 -32666120 + AluJo SINE Alu 12 286 -26 309 162 0 0 chr10 107650980 107651048 -32665717 + CT-rich Low_complexity Low_complexity 2 69 0 206 213 0 21 chr10 107651163 107651210 -32665555 + G-rich Low_complexity Low_complexity 6 51 0 2005 91 52 3 chr10 107651856 107652142 -32664623 - AluSq SINE Alu -13 300 1 182 158 53 0 chr10 107652142 107652180 -32664585 - L2 LINE L2 -11 3302 3263 2356 83 0 0 chr10 107652263 107652585 -32664180 + AluSg SINE Alu 3 310 0 2291 94 3 7 chr10 107652703 107653001 -32663764 + AluSp SINE Alu 1 297 -16 2267 99 0 0 chr10 107653013 107653327 -32663438 + AluSg SINE Alu 1 314 0 261 94 0 38 chr10 107653359 107653412 -32663353 + Alu SINE Alu 251 301 -1 272 190 0 0 chr10 107653724 107653782 -32662983 + FLAM SINE Alu 75 132 -1 2471 173 28 31 chr10 107653786 107653935 -32662830 + L1MB3 LINE L1 5307 5455 -729 1826 158 34 0 chr10 107653935 107654226 -32662539 - AluSx SINE Alu -11 301 1 2471 173 28 31 chr10 107654226 107654586 -32662179 + L1MB3 LINE L1 5455 5814 -370 2356 95 7 13 chr10 107654616 107654922 -32661843 + AluSx SINE Alu 1 304 -8 480 110 0 0 chr10 107654932 107655005 -32661760 + L1P4 LINE L1 5369 5441 -724 1022 121 0 104 chr10 107655009 107655130 -32661635 + AluSx SINE Alu 16 116 -196 2220 99 3 0 chr10 107655130 107655434 -32661331 + AluSp SINE Alu 1 305 0 1022 121 0 104 chr10 107655434 107655484 -32661281 + AluSx SINE Alu 116 170 -142 413 141 0 0 chr10 107655484 107655548 -32661217 + AluS SINE Alu 228 291 -18 1608 153 7 11 chr10 107655548 107655835 -32660930 + L1MB3 LINE L1 5894 6179 -4 2147 119 7 3 chr10 107655859 107656161 -32660604 + AluSq SINE Alu 1 303 -10 1760 147 10 29 chr10 107656485 107656797 -32659968 + AluJo SINE Alu 6 311 -1 246 231 0 46 chr10 107656825 107656890 -32659875 + AluSg/x SINE Alu 120 181 -121 863 178 75 75 chr10 107657180 107657232 -32659533 + AluJo SINE Alu 87 138 -174 1630 126 8 4 chr10 107657232 107657471 -32659294 + AluSx SINE Alu 1 240 -72 863 178 75 75 chr10 107657471 107657631 -32659134 + AluJo SINE Alu 137 299 -13 2256 101 3 10 chr10 107659123 107659429 -32657336 - AluSq SINE Alu -9 304 1 1002 245 95 50 chr10 107659496 107659957 -32656808 - MLT1J LTR MaLR -14 497 16 22 35 0 0 chr10 107660027 107660056 -32656709 + AT_rich Low_complexity Low_complexity 1 29 0 2365 84 3 0 chr10 107660601 107660897 -32655868 - AluY SINE Alu -14 297 1 2147 119 0 20 chr10 107661087 107661390 -32655375 - AluSx SINE Alu -15 297 1 30 0 0 0 chr10 107661399 107661429 -32655336 + AT_rich Low_complexity Low_complexity 1 30 0 2085 125 3 0 chr10 107661431 107661718 -32655047 - AluSx SINE Alu -24 288 1 2229 127 0 0 chr10 107661728 107662036 -32654729 - AluSx SINE Alu -4 308 1 246 253 66 22 chr10 107662491 107662582 -32654183 + MIR3 SINE MIR 105 199 -9 1955 128 3 24 chr10 107662684 107662974 -32653791 - AluSx SINE Alu -9 303 20 350 64 0 0 chr10 107662974 107663021 -32653744 - AluSc SINE Alu -71 228 182 32 43 0 0 chr10 107663054 107663100 -32653665 + AT_rich Low_complexity Low_complexity 1 46 0 1919 142 7 23 chr10 107663107 107663417 -32653348 - AluJb SINE Alu -7 305 1 199 371 67 0 chr10 107663449 107663576 -32653189 + MIR SINE MIR 38 171 -77 2333 103 3 0 chr10 107664047 107664347 -32652418 - AluSp SINE Alu -12 301 1 26 0 0 0 chr10 107664424 107664450 -32652315 + AT_rich Low_complexity Low_complexity 1 26 0 2156 128 3 3 chr10 107664817 107665123 -32651642 + AluSq SINE Alu 1 306 -7 24 53 0 0 chr10 107665677 107665715 -32651050 + AT_rich Low_complexity Low_complexity 1 38 0 2550 89 0 0 chr10 107666111 107666424 -32650341 + AluSq SINE Alu 1 313 0 2069 107 17 14 chr10 107666625 107666915 -32649850 + AluSx SINE Alu 1 291 -21 588 196 28 0 chr10 107667022 107667129 -32649636 + FLAM_A SINE Alu 1 110 -32 1536 79 0 5 chr10 107667133 107667323 -32649442 - AluSg/x SINE Alu -13 299 111 21 0 0 0 chr10 107667612 107667633 -32649132 + AT_rich Low_complexity Low_complexity 1 21 0 475 50 17 0 chr10 107669546 107669606 -32647159 - AluSp/q SINE Alu -18 295 235 2299 112 0 0 chr10 107670417 107670720 -32646045 - AluSq SINE Alu -10 303 1 674 176 0 0 chr10 107670720 107670828 -32645937 - AluSg/x SINE Alu -14 298 191 998 124 14 0 chr10 107670828 107670973 -32645792 - AluJb SINE Alu -165 147 1 355 285 100 8 chr10 107671935 107672065 -32644700 + L1MC4a LINE L1 4991 5132 -1014 427 257 126 56 chr10 107672070 107672212 -32644553 + L1MC4a LINE L1 5401 5532 -589 2324 46 3 0 chr10 107672212 107672529 -32644236 + AluY SINE Alu 1 318 0 427 257 126 56 chr10 107672529 107672804 -32643961 + L1MC4a LINE L1 5532 5782 -339 803 180 132 0 chr10 107672861 107673028 -32643737 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr10 107673652 107673673 -32643092 + GC_rich Low_complexity Low_complexity 1 21 0 2175 84 0 0 chr10 107674223 107674510 -32642255 - AluSx SINE Alu -25 287 1 1839 132 7 0 chr10 107676359 107676646 -32640119 - AluSx SINE Alu -23 289 1 1055 442 53 0 chr10 107677650 107677935 -32638830 + AluSx SINE Alu 2 301 -1 444 106 0 0 chr10 107678010 107678076 -32638689 - AluSq SINE Alu -8 303 238 1200 143 0 0 chr10 107678077 107678252 -32638513 - AluSq SINE Alu -138 175 1 598 200 0 83 chr10 107678266 107678411 -32638354 - FLAM_A SINE Alu 0 133 1 1562 176 4 11 chr10 107678612 107678891 -32637874 - AluSx SINE Alu -33 279 3 198 365 19 28 chr10 107678894 107679001 -32637764 - MIR SINE MIR -155 107 2 1544 171 9 37 chr10 107679640 107679961 -32636804 - AluJo SINE Alu 0 312 1 228 291 58 19 chr10 107680021 107680124 -32636641 - MIR3 SINE MIR -5 203 97 26 0 0 0 chr10 107680134 107680160 -32636605 + AT_rich Low_complexity Low_complexity 1 26 0 2155 102 7 0 chr10 107680167 107680471 -32636294 - AluSg SINE Alu -4 306 1 694 262 61 68 chr10 107680582 107680644 -32636121 + MER102a DNA MER1_type 45 106 -1311 2171 77 0 17 chr10 107680644 107680944 -32635821 - AluY SINE Alu -16 295 1 694 262 61 68 chr10 107680944 107681160 -32635605 + MER102a DNA MER1_type 106 321 -9 2318 102 0 0 chr10 107681328 107681641 -32635124 - AluSq SINE Alu 0 313 1 1394 178 75 4 chr10 107681643 107681924 -32634841 - AluJo SINE Alu -11 301 1 983 174 0 0 chr10 107682256 107682428 -32634337 - AluSx SINE Alu -5 305 134 2198 119 0 0 chr10 107682667 107682978 -32633787 - AluSx SINE Alu 0 312 2 24 53 0 0 chr10 107684097 107684135 -32632630 + AT_rich Low_complexity Low_complexity 1 38 0 322 212 0 15 chr10 107684153 107684219 -32632546 + Charlie5 DNA MER1_type 6 70 -2542 * 725 142 54 0 chr10 107684217 107684365 -32632400 + Charlie5 DNA MER1_type 2469 2624 0 450 248 14 7 chr10 107684424 107684569 -32632196 - HAL1 LINE L1 -123 2384 2239 25 0 0 0 chr10 107684569 107684594 -32632171 + AT_rich Low_complexity Low_complexity 1 25 0 900 81 8 0 chr10 107684594 107684717 -32632048 + AluY SINE Alu 29 152 -159 924 108 8 0 chr10 107684817 107684946 -32631819 - AluSx SINE Alu -179 134 5 411 293 72 19 chr10 107684951 107685159 -32631606 - HAL1 LINE L1 -1733 774 556 1958 110 4 0 chr10 107686064 107686336 -32630429 + AluSx SINE Alu 1 273 -39 458 143 0 0 chr10 107686436 107686506 -32630259 + Alu SINE Alu 235 304 -7 219 291 0 18 chr10 107686555 107686610 -32630155 + MER91 DNA MER1_type 137 190 0 2172 99 0 0 chr10 107686693 107687012 -32629753 - AluSp SINE Alu 0 320 2 2022 125 0 0 chr10 107687036 107687324 -32629441 - AluSp SINE Alu -24 289 2 261 342 58 71 chr10 107687324 107687348 -32629417 - L2 LINE L2 -277 3036 3013 2258 91 3 0 chr10 107687348 107687645 -32629120 - AluSq SINE Alu -13 300 3 261 342 58 71 chr10 107687645 107687775 -32628990 - L2 LINE L2 -300 3013 2884 1797 148 13 38 chr10 107687775 107688093 -32628672 + AluJo SINE Alu 1 310 -2 459 298 7 48 chr10 107688519 107688698 -32628067 + MER5B DNA MER1_type 20 178 0 2116 117 7 0 chr10 107689182 107689482 -32627283 + AluSx SINE Alu 1 302 -10 1683 134 17 34 chr10 107692222 107692520 -32624245 + AluJo SINE Alu 1 293 -19 593 221 74 78 chr10 107692758 107692997 -32623768 - MIR SINE MIR -1 261 23 2211 112 0 6 chr10 107692997 107693311 -32623454 - AluSx SINE Alu 0 312 1 1983 138 0 0 chr10 107693960 107694249 -32622516 + AluSx SINE Alu 8 296 -16 2004 130 0 0 chr10 107694270 107694563 -32622202 + AluJb SINE Alu 1 293 -19 1253 156 0 56 chr10 107694575 107694606 -32622159 + L1MB5 LINE L1 5957 5988 -186 2083 105 3 0 chr10 107694606 107694902 -32621863 + AluSq SINE Alu 1 297 -16 1253 156 0 56 chr10 107694902 107695101 -32621664 + L1MB5 LINE L1 5988 6174 0 2264 93 0 0 chr10 107695119 107695421 -32621344 + AluSc SINE Alu 1 302 -7 2229 109 0 6 chr10 107695588 107695901 -32620864 + AluSq SINE Alu 1 311 -2 399 41 0 0 chr10 107695968 107696017 -32620748 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 107696064 107696087 -32620678 + AT_rich Low_complexity Low_complexity 1 23 0 2080 112 7 0 chr10 107696147 107696441 -32620324 + AluSg SINE Alu 1 296 -14 334 250 88 27 chr10 107696545 107696693 -32620072 - L1ME3A LINE L1 -289 5881 5725 1571 176 0 4 chr10 107696946 107697227 -32619538 - AluJb SINE Alu 0 305 26 270 219 0 11 chr10 107697227 107697285 -32619480 - AluJ/monomer SINE Alu -255 47 2 1634 131 42 69 chr10 107697589 107697748 -32619017 - AluJb SINE Alu -3 299 150 1713 151 3 21 chr10 107697748 107697913 -32618852 - AluSx SINE Alu -14 298 139 2001 110 0 23 chr10 107697913 107698212 -32618553 - AluY SINE Alu -19 292 1 1713 151 3 21 chr10 107698212 107698337 -32618428 - AluSx SINE Alu -173 139 13 1634 131 42 69 chr10 107698337 107698483 -32618282 - AluJb SINE Alu -152 150 2 957 202 27 6 chr10 107699151 107699334 -32617431 - MER58A DNA MER1_type 0 224 38 641 314 18 0 chr10 107701091 107701260 -32615505 - MIR SINE MIR -27 235 64 692 101 0 93 chr10 107702696 107702748 -32614017 - L1MA5 LINE L1 -4 6296 6241 1986 145 3 3 chr10 107702748 107703058 -32613707 - AluSx SINE Alu -2 310 1 692 101 0 93 chr10 107703058 107703134 -32613631 - L1MA5 LINE L1 -59 6241 6180 661 175 79 0 chr10 107704886 107705012 -32611753 - MER5A DNA MER1_type -53 136 1 1790 137 7 26 chr10 107705377 107705683 -32611082 - AluSx SINE Alu -12 300 1 2179 107 0 0 chr10 107706451 107706759 -32610006 - AluSg SINE Alu -2 308 1 183 245 61 0 chr10 107807919 107807968 -32508797 + MIR SINE MIR 94 145 -63 526 280 122 5 chr10 107808196 107808385 -32508380 - MIR SINE MIR -21 241 31 204 261 62 54 chr10 107808586 107808716 -32508049 - L2 LINE L2 -221 3051 2921 1905 119 3 45 chr10 107809213 107809525 -32507240 - AluJo SINE Alu -13 299 1 333 328 108 11 chr10 107809727 107809913 -32506852 + MIR SINE MIR 43 246 -16 426 39 0 0 chr10 107809971 107810023 -32506742 + (CA)n Simple_repeat Simple_repeat 2 53 0 1633 158 110 21 chr10 107810056 107810391 -32506374 + MLT1A1 LTR MaLR 1 365 0 454 322 47 6 chr10 107810529 107810700 -32506065 + MIR SINE MIR 14 191 -71 603 224 0 40 chr10 107810706 107810858 -32505907 - L2 LINE L2 -2 3311 3166 966 129 20 201 chr10 107810858 107810922 -32505843 - MLT1A1 LTR MaLR -1 364 290 2260 100 7 0 chr10 107810922 107811232 -32505533 - AluSx SINE Alu 0 312 1 966 129 20 201 chr10 107811232 107811461 -32505304 - MLT1A1 LTR MaLR -75 290 124 289 330 178 0 chr10 107812393 107812578 -32504187 - MIR SINE MIR -11 251 34 2159 119 0 3 chr10 107813232 107813535 -32503230 + AluSx SINE Alu 1 302 -10 839 178 7 0 chr10 107813678 107813813 -32502952 - AluJo SINE Alu -176 136 1 219 284 14 40 chr10 107813913 107813987 -32502778 - MIR SINE MIR -87 121 50 328 294 64 0 chr10 107814220 107814329 -32502436 + MER91C DNA MER1_type 1 116 -24 271 277 32 76 chr10 107814828 107814978 -32501787 + MIR SINE MIR 32 172 -68 297 260 0 0 chr10 107815702 107815779 -32500986 + (CCAA)n Simple_repeat Simple_repeat 1 77 0 580 203 6 16 chr10 107815815 107815997 -32500768 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 2061 87 3 11 chr10 107816761 107817113 -32499652 + AluSx SINE Alu 1 350 0 265 298 39 39 chr10 107817558 107817662 -32499103 - MIR SINE MIR -77 185 82 495 210 24 16 chr10 107817680 107817804 -32498961 + L2 LINE L2 3189 3313 0 443 326 26 42 chr10 107817834 107818024 -32498741 + L3 LINE CR1 923 1109 -468 346 290 197 0 chr10 107819368 107819551 -32497214 + MIR SINE MIR 33 251 -11 517 213 42 58 chr10 107819605 107819812 -32496953 + MIR3 SINE MIR 8 206 -56 410 223 11 0 chr10 107819841 107819935 -32496830 - MER103 DNA DNA -50 116 22 566 265 5 58 chr10 107819962 107820094 -32496671 - MIR SINE MIR -71 191 69 1967 96 0 24 chr10 107820094 107820416 -32496349 - AluSx SINE Alu 0 315 1 566 265 5 58 chr10 107820416 107820471 -32496294 - MIR SINE MIR -193 69 13 198 143 0 0 chr10 107821433 107821468 -32495297 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr10 107821486 107821514 -32495251 + AT_rich Low_complexity Low_complexity 1 28 0 2019 141 0 0 chr10 107822376 107822675 -32494090 - AluJb SINE Alu -11 301 3 208 244 0 0 chr10 107822675 107822720 -32494045 - L2 LINE L2 -563 2751 2707 1074 177 86 18 chr10 107824974 107825222 -32491543 - AluJo SINE Alu 0 314 52 611 178 51 0 chr10 107825271 107825389 -32491376 - MIR SINE MIR -91 171 48 281 81 0 0 chr10 107825632 107825669 -32491096 + Alu SINE Alu 251 287 -15 2047 134 3 0 chr10 107825683 107825989 -32490776 + AluSx SINE Alu 1 307 -5 696 248 64 47 chr10 107826054 107826288 -32490477 - MIR SINE MIR 0 262 25 970 231 130 92 chr10 107828055 107828523 -32488242 + MLT1K LTR MaLR 88 573 -15 996 239 205 18 chr10 107828631 107828962 -32487803 - LTR16C LTR ERVL 0 491 99 1981 106 7 0 chr10 107830008 107830281 -32486484 - AluSp SINE Alu -10 303 29 201 74 0 0 chr10 107830667 107830694 -32486071 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 251 283 11 11 chr10 107831118 107831210 -32485555 + MIR SINE MIR 43 134 -74 602 318 15 5 chr10 107831313 107831508 -32485257 - MIR SINE MIR -19 243 47 282 169 0 113 chr10 107831554 107831625 -32485140 - L2 LINE L2 -500 2814 2752 249 83 0 0 chr10 107832018 107832054 -32484711 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 573 297 83 74 chr10 107832055 107832476 -32484289 - L2 LINE L2 -1 3312 2888 1423 203 51 88 chr10 107833024 107833090 -32483675 - MLT1C LTR MaLR -12 455 388 1800 135 7 14 chr10 107833090 107833378 -32483387 + AluJb SINE Alu 11 296 -16 1423 203 51 88 chr10 107833378 107833778 -32482987 - MLT1C LTR MaLR -79 388 6 1467 168 79 4 chr10 107834607 107834887 -32481878 - AluJo SINE Alu -11 301 1 2447 66 3 0 chr10 107835366 107835670 -32481095 - AluSp SINE Alu -8 305 1 1336 252 56 31 chr10 107836129 107836606 -32480159 + MLT1K LTR MaLR 55 588 0 450 362 32 5 chr10 107836607 107836792 -32479973 + MIR SINE MIR 61 250 -12 1727 143 43 10 chr10 107837528 107837829 -32478936 - AluJb SINE Alu -1 311 1 267 302 174 13 chr10 107837830 107837979 -32478786 + L2 LINE L2 2687 2859 -455 198 0 0 0 chr10 107839024 107839046 -32477719 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 844 145 0 0 chr10 107839047 107839171 -32477594 - FLAM_C SINE Alu -19 124 1 800 248 5 35 chr10 107839313 107839515 -32477250 - MIR SINE MIR -10 252 57 206 244 209 0 chr10 107839678 107839764 -32477001 - L2 LINE L2 -7 3265 3162 287 278 24 8 chr10 107839835 107839961 -32476804 - L2 LINE L2 -265 3007 2880 234 77 0 0 chr10 107840190 107840229 -32476536 - AluSx SINE Alu -1 300 262 1093 126 84 0 chr10 107840231 107840398 -32476367 - AluSx SINE Alu -131 181 1 232 345 35 0 chr10 107840509 107840625 -32476140 - MIR3 SINE MIR -35 173 54 2285 182 110 28 chr10 107840835 107841273 -32475492 + MLT1F LTR MaLR 1 486 -56 1720 169 7 7 chr10 107841273 107841574 -32475191 - AluJb SINE Alu -11 301 1 2285 182 110 28 chr10 107841574 107841636 -32475129 + MLT1F LTR MaLR 486 542 0 252 387 17 29 chr10 107841664 107841837 -32474928 + MER5A DNA MER1_type 19 189 0 304 263 35 18 chr10 107841865 107841979 -32474786 - MIR3 SINE MIR -86 122 7 282 270 0 27 chr10 107842466 107842540 -32474225 - L2 LINE L2 0 3313 3242 1028 235 34 0 chr10 107842558 107842796 -32473969 - MIR SINE MIR -2 260 15 224 270 71 56 chr10 107842845 107842952 -32473813 - MIR SINE MIR -71 137 25 369 333 0 0 chr10 107843583 107843688 -32473077 - MIR3 SINE MIR -10 198 94 230 303 0 0 chr10 107945458 107945524 -32371241 - MER94 DNA DNA -1 133 68 721 267 63 0 chr10 107945646 107945867 -32370898 - Charlie8 DNA MER1_type -2145 272 38 2245 100 0 0 chr10 107947380 107947661 -32369104 - AluY SINE Alu -8 303 23 396 309 122 17 chr10 107947690 107947871 -32368894 + MIR SINE MIR 5 204 -58 298 281 0 70 chr10 107948070 107948198 -32368567 + MIR3 SINE MIR 72 190 -18 2206 100 31 3 chr10 107948216 107948506 -32368259 + AluSx SINE Alu 1 298 -14 1874 150 0 54 chr10 107948514 107948827 -32367938 + AluJb SINE Alu 1 296 -16 233 294 184 25 chr10 107949129 107949292 -32367473 + MIR SINE MIR 20 208 -54 2149 139 7 0 chr10 107949728 107950037 -32366728 + AluSq SINE Alu 1 311 -2 216 0 0 0 chr10 107951111 107951135 -32365630 + (GTTTG)n Simple_repeat Simple_repeat 3 26 0 1059 152 0 0 chr10 107951136 107951301 -32365464 - MLT1B LTR MaLR -52 338 174 560 318 103 19 chr10 107952303 107952624 -32364141 + L2 LINE L2 2963 3310 -3 601 107 0 0 chr10 107953293 107953377 -32363388 - AluS SINE Alu -227 85 2 684 259 12 0 chr10 107953619 107953781 -32362984 - MER96 DNA MER1_type? -1 174 11 1913 128 30 43 chr10 107954595 107954764 -32362001 - AluSx SINE Alu -11 301 136 2553 80 0 0 chr10 107954764 107955075 -32361690 - AluY SINE Alu 0 311 1 1913 128 30 43 chr10 107955075 107955210 -32361555 - AluSx SINE Alu -176 136 1 279 310 6 46 chr10 107955220 107955394 -32361371 + CT-rich Low_complexity Low_complexity 2 168 0 2122 114 4 4 chr10 107955716 107956032 -32360733 - AluSx SINE Alu 0 316 1 278 275 53 35 chr10 107956192 107956361 -32360404 - MIR3 SINE MIR -17 191 19 253 266 191 20 chr10 107956460 107956659 -32360106 - L2 LINE L2 -558 2756 2524 316 128 0 0 chr10 107958087 107958134 -32358631 + AluSx SINE Alu 1 47 -261 2030 91 0 22 chr10 107958161 107958435 -32358330 + AluSx SINE Alu 43 310 -2 830 237 34 122 chr10 107958442 107958884 -32357881 - Tigger3(Golem) DNA MER2_type -1 3028 6 408 266 141 52 chr10 107960865 107961113 -32355652 + L2 LINE L2 3000 3269 -3 198 0 0 0 chr10 107961262 107961284 -32355481 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 219 289 217 0 chr10 107961290 107961373 -32355392 - L2 LINE L2 -13 3300 3200 289 208 65 61 chr10 107961629 107961743 -32355022 + MIR SINE MIR 36 146 -63 853 163 0 15 chr10 107961745 107961880 -32354885 + AluJb SINE Alu 1 133 -179 5267 148 17 31 chr10 107962534 107962715 -32354050 - L1MA5 LINE L1 -2 6298 6116 1244 253 0 3 chr10 107962715 107963007 -32353758 + AluJo SINE Alu 1 291 -21 5267 148 17 31 chr10 107963007 107964180 -32352585 - L1MA5 LINE L1 -184 6116 4960 327 100 0 0 chr10 107964285 107964335 -32352430 + Alu SINE Alu 249 298 -2 199 269 237 11 chr10 107965817 107965910 -32350855 + L2 LINE L2 3192 3305 -8 2253 93 3 10 chr10 107965938 107966239 -32350526 + AluSx SINE Alu 1 299 -13 368 276 150 90 chr10 107967785 107968151 -32348614 - L1ME4a LINE L1 -55 6066 5679 237 94 245 0 chr10 107968154 107968207 -32348558 - AluSc SINE Alu 0 299 234 1906 122 12 0 chr10 107968282 107968536 -32348229 - AluSx SINE Alu -55 257 1 254 311 38 0 chr10 107968616 107968722 -32348043 - L1M2 LINE L1 -728 5572 5463 542 116 0 0 chr10 107968739 107968825 -32347940 - AluS SINE Alu 0 310 225 1929 124 0 4 chr10 107968825 107969091 -32347674 - AluSx SINE Alu -13 299 35 1712 181 24 17 chr10 107969874 107970167 -32346598 - AluJo SINE Alu -17 295 1 2394 64 0 3 chr10 107970202 107970511 -32346254 - AluY SINE Alu 0 308 1 367 281 11 7 chr10 107970514 107970658 -32346107 - MIR3 SINE MIR -66 142 11 1721 171 7 17 chr10 107971778 107972071 -32344694 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr10 107972071 107972092 -32344673 + AT_rich Low_complexity Low_complexity 1 21 0 259 324 0 28 chr10 107973110 107973218 -32343547 + GA-rich Low_complexity Low_complexity 5 109 0 2059 149 10 0 chr10 107973977 107974278 -32342487 - AluSx SINE Alu -8 304 1 195 42 0 0 chr10 107974420 107974444 -32342321 + (GGAGA)n Simple_repeat Simple_repeat 4 27 0 298 319 50 43 chr10 107977830 107977971 -32338794 + MIR SINE MIR 64 205 -57 23 0 0 0 chr10 107979533 107979556 -32337209 + AT_rich Low_complexity Low_complexity 1 23 0 2047 124 0 7 chr10 107980857 107981163 -32335602 - AluSx SINE Alu 0 312 9 1791 100 4 4 chr10 107981221 107981471 -32335294 + AluSq SINE Alu 61 310 -3 186 356 59 25 chr10 107983030 107983148 -32333617 - MIR SINE MIR -131 131 10 232 163 0 94 chr10 107983447 107983542 -32333223 + MIR SINE MIR 102 183 -62 190 290 22 20 chr10 107983610 107983727 -32333038 - MIR SINE MIR -73 135 51 378 127 0 0 chr10 107984330 107984401 -32332364 + (GGA)n Simple_repeat Simple_repeat 3 73 0 366 231 88 0 chr10 107985647 107985738 -32331027 + L3 LINE CR1 1304 1402 -175 35 24 0 0 chr10 107986080 107986122 -32330643 + AT_rich Low_complexity Low_complexity 1 42 0 843 145 8 0 chr10 107986153 107986284 -32330481 - FLAM_C SINE Alu -1 132 1 320 278 143 8 chr10 107986284 107986417 -32330348 - MIR SINE MIR -98 164 14 406 284 173 24 chr10 107986859 107987067 -32329698 - MIR SINE MIR -1 261 23 292 164 33 0 chr10 107988579 107988640 -32328125 + MIR SINE MIR 91 153 -109 869 263 97 0 chr10 107988724 107988952 -32327813 + MIR SINE MIR 13 262 0 212 179 45 75 chr10 107988983 107989050 -32327715 + L2 LINE L2 3025 3089 -183 426 252 163 57 chr10 107989317 107989499 -32327266 - MER102b DNA MER1_type -1095 333 109 1624 180 3 37 chr10 107989499 107989822 -32326943 - AluJb SINE Alu 0 312 1 426 252 163 57 chr10 107989822 107989921 -32326844 - MER102b DNA MER1_type -1319 109 22 200 94 0 31 chr10 107991789 107991821 -32324944 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 264 319 18 0 chr10 107992016 107992129 -32324636 + (TGG)n Simple_repeat Simple_repeat 2 116 0 632 301 39 0 chr10 107992769 107992972 -32323793 - MIR SINE MIR -6 256 46 858 205 7 13 chr10 107993523 107993707 -32323058 + FRAM SINE Alu 1 47 0 838 101 0 47 chr10 107993759 107993888 -32322877 + FLAM_C SINE Alu 5 127 -6 969 162 42 0 chr10 107993928 107994095 -32322670 - AluJb SINE Alu -19 293 120 1862 104 73 14 chr10 107994196 107994484 -32322281 + AluSg SINE Alu 1 305 -5 776 169 0 15 chr10 107994491 107994627 -32322138 + AluSq/x SINE Alu 1 134 -178 2266 109 0 0 chr10 107994627 107994939 -32321826 + AluSx SINE Alu 1 312 0 622 173 121 12 chr10 107995226 107995440 -32321325 + MLT1A1 LTR MaLR 83 379 -11 1039 98 0 0 chr10 107995611 107995744 -32321021 + AluSq/x SINE Alu 1 133 -180 646 319 164 21 chr10 107995906 107996325 -32320440 + L2 LINE L2 2521 2879 -434 3132 144 70 57 chr10 107996325 107996555 -32320210 + MER39B LTR ERV1 1 227 -426 2165 77 11 3 chr10 107996555 107996841 -32319924 + AluSx SINE Alu 12 299 -13 3132 144 70 57 chr10 107996841 107997255 -32319510 + MER39B LTR ERV1 227 653 0 646 319 164 21 chr10 107997255 107997531 -32319234 + L2 LINE L2 2879 3313 0 2039 140 3 6 chr10 107997903 107998217 -32318548 - AluSq SINE Alu 0 313 1 760 167 16 0 chr10 107998218 107998344 -32318421 - AluJo/FLAM SINE Alu -173 129 2 206 248 281 33 chr10 107999332 107999453 -32317312 + L2 LINE L2 3163 3313 0 2263 89 7 0 chr10 107999487 107999791 -32316974 - AluSc SINE Alu -3 306 1 260 283 42 42 chr10 108000210 108000330 -32316435 + L2 LINE L2 3175 3294 -19 2216 103 3 0 chr10 108000924 108001225 -32315540 - AluSq SINE Alu -11 302 1 2099 93 21 7 chr10 108001790 108002081 -32314684 + AluSx SINE Alu 3 297 -15 351 276 191 7 chr10 108002181 108002333 -32314432 + MER5A DNA MER1_type 4 183 -6 263 250 9 0 chr10 108003439 108003555 -32313210 + (TCCA)n Simple_repeat Simple_repeat 2 118 0 360 318 17 6 chr10 108003584 108003737 -32313028 + (TCCA)n Simple_repeat Simple_repeat 1 158 -17 2227 104 3 0 chr10 108003737 108004046 -32312719 - AluSx SINE Alu -2 310 1 360 318 17 6 chr10 108004046 108004065 -32312700 + (TCCA)n Simple_repeat Simple_repeat 158 175 0 291 313 76 61 chr10 108004118 108004316 -32312449 - L2 LINE L2 -47 3225 3025 227 302 35 35 chr10 108004648 108004734 -32312031 - MIR SINE MIR -157 105 20 288 257 53 35 chr10 108004750 108004863 -32311902 - MIR3 SINE MIR -9 199 85 644 245 117 0 chr10 108005204 108005392 -32311373 + MIR SINE MIR 53 262 0 604 289 40 6 chr10 108006215 108006388 -32310377 + LTR16C LTR ERVL 149 327 -164 2031 108 20 10 chr10 108006858 108007163 -32309602 - AluSx SINE Alu -4 308 1 3155 155 18 16 chr10 108007170 108007732 -32309033 + MER39B LTR ERV1 89 651 -2 186 43 0 0 chr10 108008854 108008877 -32307888 + (CAA)n Simple_repeat Simple_repeat 2 24 0 244 286 118 8 chr10 108008924 108009043 -32307722 - L2 LINE L2 -175 3097 2966 2038 123 3 3 chr10 108009421 108009722 -32307043 - AluSx SINE Alu -11 301 1 2482 138 15 0 chr10 108010326 108010717 -32306048 + MER39B LTR ERV1 257 653 0 2197 90 0 0 chr10 108011366 108011665 -32305100 - AluY SINE Alu -8 303 5 211 272 78 48 chr10 108011912 108012015 -32304750 + L2 LINE L2 3208 3313 0 298 200 138 0 chr10 108012415 108012495 -32304270 - MIR SINE MIR -14 248 158 2221 89 7 3 chr10 108012632 108012936 -32303829 + HERVH LTR ERV1 4716 5020 -2693 2763 95 9 14 chr10 108012940 108013373 -32303392 + HERVH LTR ERV1 7283 7713 0 2584 119 58 23 chr10 108013373 108013808 -32302957 + LTR7 LTR ERV1 1 450 0 1597 203 7 7 chr10 108013931 108014241 -32302524 + AluJb SINE Alu 1 310 -2 2154 126 0 7 chr10 108014738 108015047 -32301718 - AluSx SINE Alu 0 312 6 804 238 108 46 chr10 108015309 108015632 -32301133 + L2 LINE L2 2966 3308 -5 231 204 0 0 chr10 108015646 108015695 -32301070 + GA-rich Low_complexity Low_complexity 4 52 0 243 327 19 19 chr10 108016531 108016638 -32300127 + MIR SINE MIR 153 259 -3 1904 155 0 0 chr10 108016698 108016988 -32299777 + AluJb SINE Alu 11 300 -12 360 164 11 90 chr10 108016988 108017165 -32299600 + GA-rich Low_complexity Low_complexity 1 163 0 251 184 14 177 chr10 108017915 108017974 -32298791 + MER20B DNA MER1_type 9 33 -750 1623 166 3 48 chr10 108017974 108018114 -32298651 + AluJb SINE Alu 1 146 -166 1953 128 3 13 chr10 108018114 108018418 -32298347 + AluSx SINE Alu 1 301 -11 1623 166 3 48 chr10 108018418 108018591 -32298174 + AluJb SINE Alu 146 300 -12 251 184 14 177 chr10 108018591 108018672 -32298093 + MER20B DNA MER1_type 33 126 -657 248 248 147 54 chr10 108018725 108018854 -32297911 + L2 LINE L2 2988 3128 -144 312 231 44 22 chr10 108018943 108019034 -32297731 + MLT1F1 LTR MaLR 55 147 -420 1816 135 16 13 chr10 108019034 108019346 -32297419 + L1MC3 LINE L1 7207 7519 -266 2023 112 3 0 chr10 108019347 108019678 -32297087 + AluSg SINE Alu 1 332 0 1097 138 6 0 chr10 108019680 108019847 -32296918 + AluJb SINE Alu 133 300 -12 1726 197 35 50 chr10 108020982 108021378 -32295387 + MLT1B LTR MaLR 1 390 0 329 310 22 91 chr10 108021461 108021569 -32295196 + MIR SINE MIR 47 161 -101 813 183 0 0 chr10 108021569 108021700 -32295065 + FLAM_A SINE Alu 1 131 -2 2112 98 0 3 chr10 108021701 108022016 -32294749 + AluSq SINE Alu 1 314 0 329 310 22 91 chr10 108022016 108022136 -32294629 + MIR SINE MIR 160 262 0 228 379 50 8 chr10 108022359 108022599 -32294166 + L2 LINE L2 2692 2941 -373 520 291 0 19 chr10 108022752 108022910 -32293855 - MER5A DNA MER1_type -34 155 1 697 281 68 24 chr10 108023159 108023408 -32293357 + MIR SINE MIR 2 261 -1 1423 155 105 14 chr10 108023879 108024156 -32292609 + AluJo SINE Alu 1 302 0 519 119 10 20 chr10 108024157 108024258 -32292507 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 1079 171 34 0 chr10 108024576 108024781 -32291984 + L1MB5 LINE L1 5634 5845 -329 42 0 0 0 chr10 108025304 108025346 -32291419 + GC_rich Low_complexity Low_complexity 1 42 0 1280 177 31 31 chr10 108025387 108025641 -32291124 + AluSx SINE Alu 58 311 -1 612 337 68 52 chr10 108026118 108026330 -32290435 - L2 LINE L2 -576 2738 2531 2196 131 3 3 chr10 108026330 108026642 -32290123 + AluJb SINE Alu 1 312 0 612 337 68 52 chr10 108026642 108027019 -32289746 - L2 LINE L2 -783 2531 2140 2175 175 90 24 chr10 108027499 108027674 -32289091 + MLT1D LTR MaLR 6 168 -337 2144 107 10 0 chr10 108027674 108027965 -32288800 + AluSx SINE Alu 1 294 -18 180 0 0 0 chr10 108027965 108027985 -32288780 + (GA)n Simple_repeat Simple_repeat 2 21 0 2175 175 90 24 chr10 108027985 108028277 -32288488 + MLT1D LTR MaLR 167 505 0 607 273 51 5 chr10 108028355 108028571 -32288194 - MIR SINE MIR -20 242 17 2732 29 0 0 chr10 108028584 108028890 -32287875 - AluY SINE Alu -5 306 1 183 300 0 0 chr10 108028952 108029002 -32287763 + MIR SINE MIR 199 248 -14 2163 87 3 51 chr10 108029482 108029794 -32286971 - AluSp SINE Alu -16 297 1 561 201 0 143 chr10 108030647 108030836 -32285929 + MIR SINE MIR 90 251 -11 2283 113 0 3 chr10 108030954 108031263 -32285502 - AluSx SINE Alu -4 308 1 274 214 0 179 chr10 108032086 108032203 -32284562 + MER5A DNA MER1_type 93 188 -1 541 165 44 44 chr10 108032243 108032401 -32284364 + Charlie7 DNA MER1_type 2448 2605 -7 212 266 94 16 chr10 108032731 108032795 -32283970 - L2 LINE L2 0 3313 3245 1487 151 37 33 chr10 108032902 108033174 -32283591 + AluJo SINE Alu 5 277 -35 373 125 0 4 chr10 108033181 108033245 -32283520 + Alu SINE Alu 1 50 -249 288 223 27 9 chr10 108034001 108034113 -32282652 + (TA)n Simple_repeat Simple_repeat 1 114 0 815 214 32 27 chr10 108034462 108034649 -32282116 + MER5A DNA MER1_type 1 188 -1 204 234 32 11 chr10 108035565 108035659 -32281106 + (TATG)n Simple_repeat Simple_repeat 4 99 0 751 300 73 49 chr10 108036000 108036896 -32279869 + L1MC4a LINE L1 4906 5342 -804 2188 99 0 24 chr10 108036898 108037035 -32279730 + AluSx SINE Alu 1 140 -172 2681 39 0 3 chr10 108037035 108037340 -32279425 + AluY SINE Alu 1 304 -7 2188 99 0 24 chr10 108037340 108037494 -32279271 + AluSx SINE Alu 140 285 -27 23 33 0 0 chr10 108037497 108037527 -32279238 + AT_rich Low_complexity Low_complexity 1 30 0 2030 120 0 23 chr10 108037702 108038002 -32278763 + AluSc SINE Alu 1 293 -16 1267 136 19 0 chr10 108038651 108038865 -32277900 - L1MB3 LINE L1 -7 6176 5959 306 279 80 40 chr10 108039437 108039663 -32277102 + L1M4b LINE L1 11 245 -6614 1719 241 40 32 chr10 108039770 108039841 -32276924 + L1M4b LINE L1 2514 2583 -4374 2536 75 3 0 chr10 108039841 108040148 -32276617 - AluSp SINE Alu -5 308 1 1719 241 40 32 chr10 108040148 108040917 -32275848 + L1M4b LINE L1 2583 3310 -3647 860 309 97 70 chr10 108041336 108042487 -32274278 - L2 LINE L2 -413 2901 1719 1903 171 0 13 chr10 108042818 108043122 -32273643 - AluJo SINE Alu -12 300 1 285 291 153 8 chr10 108043386 108043626 -32273139 + L2 LINE L2 2762 3037 -276 360 223 54 88 chr10 108043642 108043790 -32272975 + L2 LINE L2 3171 3313 0 203 182 212 0 chr10 108043852 108043918 -32272847 - MIR SINE MIR 0 262 183 2402 165 47 62 chr10 108044199 108044559 -32272206 - MER67A LTR ERV1 0 543 192 511 16 0 0 chr10 108044559 108044621 -32272144 - L1PA6 LINE L1 -1 6153 6092 2402 165 47 62 chr10 108044621 108044811 -32271954 - MER67A LTR ERV1 -351 192 1 190 139 28 0 chr10 108044921 108044957 -32271808 - MIR3 SINE MIR -42 166 130 2144 105 3 20 chr10 108045710 108046016 -32270749 - AluSg SINE Alu -9 301 1 220 286 0 56 chr10 108046925 108047086 -32269679 + (CCGGG)n Simple_repeat Simple_repeat 4 155 0 * 428 222 0 56 chr10 108046978 108047122 -32269643 + (CGGGG)n Simple_repeat Simple_repeat 4 139 0 207 0 0 0 chr10 108048142 108048165 -32268600 + (T)n Simple_repeat Simple_repeat 1 23 0 465 234 0 27 chr10 108048471 108048582 -32268183 + L2 LINE L2 3197 3304 -9 1996 137 30 9 chr10 108049341 108049669 -32267096 + MER1B DNA MER1_type 3 337 0 1506 250 60 65 chr10 108049997 108050617 -32266148 + MER21B LTR ERV1 98 714 -149 1661 156 80 0 chr10 108050773 108051048 -32265717 + AluJb SINE Alu 3 299 -13 375 23 0 0 chr10 108051048 108051092 -32265673 + (TA)n Simple_repeat Simple_repeat 2 45 0 316 173 0 19 chr10 108053089 108053141 -32263624 + Alu SINE Alu 1 51 -252 258 317 29 0 chr10 108053242 108053346 -32263419 - MLT1J2 LTR MaLR -81 369 263 638 144 96 32 chr10 108053754 108053879 -32262886 + FLAM_C SINE Alu 1 133 0 25 0 0 0 chr10 108055312 108055337 -32261428 + AT_rich Low_complexity Low_complexity 1 25 0 1116 133 0 0 chr10 108055877 108056057 -32260708 + (TA)n Simple_repeat Simple_repeat 1 180 0 182 328 0 15 chr10 108056164 108056231 -32260534 - L2 LINE L2 -8 3264 3199 305 274 81 32 chr10 108056286 108056410 -32260355 - MIR SINE MIR -50 212 83 2342 97 0 0 chr10 108057279 108057577 -32259188 - AluSx SINE Alu -14 298 1 411 243 50 107 chr10 108058122 108058293 -32258472 - L1ME LINE L1 -343 5778 5628 951 137 85 0 chr10 108058293 108058446 -32258319 - FAM SINE Alu -9 166 1 411 243 50 107 chr10 108058446 108058554 -32258211 - L1ME LINE L1 -493 5628 5515 2128 130 3 16 chr10 108058742 108059049 -32257716 - AluJo SINE Alu -9 303 1 24 38 0 38 chr10 108060933 108060959 -32255806 + AT_rich Low_complexity Low_complexity 1 26 -25 861 153 0 0 chr10 108060959 108061090 -32255675 - FLAM_C SINE Alu -2 131 1 24 38 0 38 chr10 108061090 108061116 -32255649 + AT_rich Low_complexity Low_complexity 26 51 0 1282 199 86 73 chr10 108061643 108062025 -32254740 - MSTD LTR MaLR -2 394 8 1080 184 57 9 chr10 108062134 108062346 -32254419 - MER58A DNA MER1_type -2 222 1 425 213 35 155 chr10 108063717 108063975 -32252790 - MIR SINE MIR -3 259 33 726 147 0 0 chr10 108064058 108064167 -32252598 + FLAM_A SINE Alu 21 129 -13 842 186 86 23 chr10 108064295 108064515 -32252250 + MIR SINE MIR 2 235 -27 239 181 0 12 chr10 108064653 108064736 -32252029 + GA-rich Low_complexity Low_complexity 1 82 0 1957 159 27 0 chr10 108065710 108066011 -32250754 - AluJo SINE Alu -3 309 1 591 261 50 29 chr10 108066584 108066763 -32250002 + MIR SINE MIR 3 183 -60 481 257 28 34 chr10 108066779 108066958 -32249807 + L1M4c LINE L1 1265 1442 -4942 365 290 60 71 chr10 108067292 108067575 -32249190 - L1MC4a LINE L1 -1746 6062 5783 475 213 194 0 chr10 108068098 108068206 -32248559 - FLAM_A SINE Alu -13 129 1 1097 120 0 0 chr10 108068588 108068730 -32248035 + AluSq/x SINE Alu 1 142 -171 579 240 33 0 chr10 108069101 108069251 -32247514 + L2 LINE L2 3159 3313 0 245 217 65 43 chr10 108069259 108069351 -32247414 - HAL1 LINE L1 -33 2474 2381 368 305 109 15 chr10 108069419 108069684 -32247081 - L1MC4a LINE L1 -573 5786 5642 206 118 0 0 chr10 108070698 108070732 -32246033 + (T)n Simple_repeat Simple_repeat 1 34 0 2480 59 14 0 chr10 108071956 108072244 -32244521 + AluY SINE Alu 1 292 -19 1357 197 21 0 chr10 108073460 108073694 -32243071 - MER8 DNA MER2_type 0 239 1 742 243 77 0 chr10 108073840 108074009 -32242756 - MER20 DNA MER1_type -6 213 32 638 328 43 25 chr10 108074024 108074420 -32242345 - L1MC4a LINE L1 -1899 5909 5507 274 162 44 0 chr10 108075264 108075332 -32241433 + CT-rich Low_complexity Low_complexity 2 72 0 2471 86 0 9 chr10 108075419 108075734 -32241031 + AluSx SINE Alu 1 312 0 201 176 0 0 chr10 108075826 108075860 -32240905 + T-rich Low_complexity Low_complexity 1 34 0 207 252 130 16 chr10 108076411 108076534 -32240231 + MIR3 SINE MIR 22 158 -50 198 333 32 16 chr10 108076536 108076662 -32240103 - MER5B DNA MER1_type 0 178 51 369 300 102 82 chr10 108077922 108078325 -32238440 - L1MC4a LINE L1 -1675 6133 5723 808 259 109 0 chr10 108078502 108078722 -32238043 + MIR SINE MIR 9 252 -10 339 252 43 61 chr10 108078982 108079097 -32237668 - L1MC4 LINE L1 0 8042 7930 741 110 144 0 chr10 108079735 108079853 -32236912 + AluJo SINE Alu 2 136 -176 191 276 121 0 chr10 108080429 108080487 -32236278 + L2 LINE L2 3205 3269 -3 238 264 241 0 chr10 108080605 108080692 -32236073 - MIR3 SINE MIR -16 192 85 184 195 260 39 chr10 108080798 108080875 -32235890 - L2 LINE L2 -20 3293 3200 472 249 17 75 chr10 108080917 108081158 -32235607 + MER112 DNA MER1_type 19 245 -15 2506 122 51 25 chr10 108081187 108081306 -32235459 - LTR56 LTR ERV1 0 445 330 2523 97 0 0 chr10 108081306 108081616 -32235149 - AluSx SINE Alu -2 310 1 2506 122 51 25 chr10 108081616 108081930 -32234835 - LTR56 LTR ERV1 -115 330 1 209 333 0 0 chr10 108082451 108082505 -32234260 - MER5A DNA MER1_type -7 182 129 326 306 115 10 chr10 108084124 108084333 -32232432 + L1ME LINE L1 5589 5819 -302 1045 250 164 11 chr10 108084543 108084903 -32231862 + L2 LINE L2 1972 2386 -928 688 207 6 24 chr10 108084903 108085072 -32231693 + LTR28 LTR ERV1 1 166 -854 253 234 0 0 chr10 108085105 108085169 -32231596 + LTR1 LTR ERV1 119 182 -603 * 1371 219 21 24 chr10 108085145 108085483 -32231282 + LTR27 LTR ERV1 298 634 -2 917 266 252 20 chr10 108085503 108086243 -32230522 + L2 LINE L2 2398 3300 -13 824 261 99 37 chr10 108086243 108086645 -32230120 + LTR16C LTR ERVL 64 490 -1 383 236 34 0 chr10 108086812 108086901 -32229864 + LTR27 LTR ERV1 436 527 -109 2085 130 88 21 chr10 108088279 108088582 -32228183 + L1MB7 LINE L1 5648 5990 -194 2084 120 10 7 chr10 108088582 108088874 -32227891 + AluSx SINE Alu 1 293 -19 2085 130 88 21 chr10 108088874 108089001 -32227764 + L1MB7 LINE L1 5990 6107 -77 780 236 58 65 chr10 108089003 108089296 -32227469 - MLT1G1 LTR MaLR -304 291 1 303 317 0 0 chr10 108089428 108089510 -32227255 + L1MC4 LINE L1 6614 6695 -1347 243 0 0 0 chr10 108089537 108089564 -32227201 + (GA)n Simple_repeat Simple_repeat 2 28 0 2213 86 4 0 chr10 108089564 108089842 -32226923 - AluSp SINE Alu -34 279 1 973 302 41 14 chr10 108090032 108090446 -32226319 - L1MC/D LINE L1 -2004 5804 5380 2260 100 13 3 chr10 108091445 108091744 -32225021 - AluSx SINE Alu -10 302 1 2424 92 0 3 chr10 108092202 108092507 -32224258 + AluSc SINE Alu 1 304 -5 279 243 122 65 chr10 108093517 108093624 -32223141 - L2 LINE L2 -21 3292 3180 227 137 0 20 chr10 108093782 108093833 -32222932 + (TG)n Simple_repeat Simple_repeat 2 51 0 264 213 8 102 chr10 108093919 108094046 -32222719 + Charlie8 DNA MER1_type 56 170 -2247 258 349 42 26 chr10 108094072 108094261 -32222504 - L2 LINE L2 -558 2756 2565 1790 129 44 44 chr10 108095092 108095387 -32221378 - AluSx SINE Alu -17 295 1 404 268 46 46 chr10 108095536 108095689 -32221076 - MIR SINE MIR -67 195 43 21 82 0 0 chr10 108096067 108096116 -32220649 + AT_rich Low_complexity Low_complexity 1 49 0 2124 136 0 13 chr10 108096187 108096495 -32220270 + AluJo SINE Alu 1 304 -8 266 247 35 35 chr10 108096723 108096808 -32219957 - L1ME3 LINE L1 -60 6102 6018 502 238 98 49 chr10 108096840 108097004 -32219761 + Charlie8 DNA MER1_type 81 252 -2165 504 169 186 34 chr10 108097245 108097328 -32219437 + MER5A DNA MER1_type 4 73 -116 2454 122 2 49 chr10 108097328 108097544 -32219221 - MLT1B LTR MaLR 0 390 166 2504 89 0 0 chr10 108097544 108097847 -32218918 - AluSq SINE Alu -10 303 1 2454 122 2 49 chr10 108097847 108098007 -32218758 - MLT1B LTR MaLR -224 166 32 2002 151 3 3 chr10 108098007 108098306 -32218459 + AluJb SINE Alu 1 299 -13 2454 122 2 49 chr10 108098306 108098337 -32218428 - MLT1B LTR MaLR -358 32 1 504 169 186 34 chr10 108098337 108098406 -32218359 + MER5A DNA MER1_type 73 183 -6 1853 186 0 0 chr10 108098407 108098713 -32218052 + AluJb SINE Alu 1 306 -6 914 188 0 7 chr10 108099394 108099543 -32217222 - FAM SINE Alu -36 149 2 21 0 0 0 chr10 108099556 108099577 -32217188 + AT_rich Low_complexity Low_complexity 1 21 0 388 290 56 12 chr10 108099685 108099847 -32216918 + L1ME LINE L1 48 216 -5854 693 258 48 19 chr10 108099880 108100194 -32216571 + L1ME LINE L1 566 888 -5182 1313 99 0 0 chr10 108100611 108100772 -32215993 - AluSg SINE Alu -149 161 1 567 198 144 0 chr10 108100774 108100885 -32215880 - FLAM_A SINE Alu -2 131 5 1040 234 35 11 chr10 108101147 108101433 -32215332 - L1ME3 LINE L1 -91 6071 5779 1201 190 31 0 chr10 108101435 108101661 -32215104 + MER21B LTR ERV1 1 233 -630 2192 135 3 0 chr10 108102014 108102325 -32214440 - AluSx SINE Alu 0 312 1 448 296 0 32 chr10 108102429 108102554 -32214211 - L2 LINE L2 0 3313 3193 950 220 0 0 chr10 108102849 108103022 -32213743 - FAM SINE Alu -2 173 1 236 219 16 47 chr10 108104183 108104247 -32212518 + MLT1K LTR MaLR 188 249 -339 227 282 0 28 chr10 108105860 108105931 -32210834 + GA-rich Low_complexity Low_complexity 2 70 0 306 276 37 75 chr10 108106134 108106268 -32210497 - MIR3 SINE MIR -72 136 8 218 271 0 0 chr10 108106323 108106371 -32210394 - L2 LINE L2 -13 3259 3212 450 295 43 7 chr10 108107024 108107163 -32209602 + MIR3 SINE MIR 65 208 0 198 235 0 39 chr10 108107512 108107563 -32209202 + L2 LINE L2 3224 3272 0 255 272 11 56 chr10 108109540 108109720 -32207045 + C-rich Low_complexity Low_complexity 1 172 0 206 228 0 38 chr10 108109865 108109944 -32206821 + (CGGG)n Simple_repeat Simple_repeat 1 76 0 29 47 0 0 chr10 108110037 108110080 -32206685 + GC_rich Low_complexity Low_complexity 1 43 0 930 216 53 18 chr10 108111859 108112086 -32204679 + MIR SINE MIR 28 262 0 425 231 63 13 chr10 108112406 108112518 -32204247 - MIR3 SINE MIR -11 197 79 377 309 50 29 chr10 108113748 108113887 -32202878 - MIR SINE MIR -90 172 31 324 214 111 2 chr10 108114376 108114472 -32202293 + MIR SINE MIR 36 139 -69 629 239 81 36 chr10 108115996 108116218 -32200547 - MIR SINE MIR -6 256 25 565 206 14 139 chr10 108116369 108116592 -32200173 + MIR SINE MIR 58 252 -10 207 114 0 0 chr10 108117194 108117229 -32199536 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2327 101 0 0 chr10 108117471 108117767 -32198998 - AluSx SINE Alu -16 296 1 1723 166 3 39 chr10 108117799 108118106 -32198659 + AluJb SINE Alu 1 296 -16 940 185 19 0 chr10 108118114 108118276 -32198489 + FRAM SINE Alu 1 164 -12 409 286 19 86 chr10 108118386 108118596 -32198169 - MIR SINE MIR -46 216 21 4211 65 2 58 chr10 108119655 108120065 -32196700 - MER41A LTR ERV1 0 554 185 2237 114 0 22 chr10 108120065 108120382 -32196383 - AluSx SINE Alu -2 310 1 4211 65 2 58 chr10 108120382 108120558 -32196207 - MER41A LTR ERV1 -369 185 1 230 336 89 7 chr10 108120559 108120705 -32196060 - MIR SINE MIR -6 256 99 412 212 126 53 chr10 108121483 108121634 -32195131 - MIR SINE MIR -53 209 48 283 287 37 28 chr10 108122026 108122134 -32194631 - LTR16C LTR ERVL -315 176 68 554 164 42 28 chr10 108122171 108122319 -32194446 + MIR SINE MIR 27 176 -63 1223 229 189 40 chr10 108122566 108122679 -32194086 - L2 LINE L2 -5 3308 3213 2676 134 39 29 chr10 108122679 108123163 -32193602 + L1MA4 LINE L1 5812 6300 0 1223 229 189 40 chr10 108123163 108123280 -32193485 - L2 LINE L2 -100 3213 3115 2563 60 0 3 chr10 108123280 108123581 -32193184 - AluY SINE Alu -11 300 1 1223 229 189 40 chr10 108123581 108123821 -32192944 - L2 LINE L2 -198 3115 2796 607 190 109 45 chr10 108124581 108124802 -32191963 - MIR SINE MIR 0 262 28 420 301 92 0 chr10 108125550 108125713 -32191052 + MIR SINE MIR 9 186 -76 182 180 49 49 chr10 108125730 108125791 -32190974 + MIR SINE MIR 35 95 -167 600 253 23 40 chr10 108125840 108126014 -32190751 + MIR SINE MIR 80 250 -12 982 228 34 13 chr10 108126899 108127132 -32189633 + MIR SINE MIR 8 245 -17 197 246 62 46 chr10 108127677 108127742 -32189023 - MIR SINE MIR -99 163 98 238 167 24 0 chr10 108128019 108128061 -32188704 + LTR16C LTR ERVL 449 491 0 204 220 20 20 chr10 108128074 108128124 -32188641 - MIR SINE MIR -126 82 33 266 115 19 0 chr10 108128717 108128769 -32187996 + (TG)n Simple_repeat Simple_repeat 1 53 0 280 248 26 26 chr10 108128790 108128903 -32187862 + (TG)n Simple_repeat Simple_repeat 2 114 0 307 179 22 43 chr10 108128915 108129099 -32187666 + (TG)n Simple_repeat Simple_repeat 1 180 0 380 258 133 0 chr10 108129310 108129438 -32187327 - MIR SINE MIR -70 192 48 521 184 10 19 chr10 108130608 108130711 -32186054 + MIR SINE MIR 76 177 -85 1355 162 76 17 chr10 108130822 108131124 -32185641 - L1MB8 LINE L1 0 6178 5859 288 227 52 10 chr10 108131721 108131818 -32184947 - MLT1L LTR MaLR -7 608 508 261 273 37 15 chr10 108131848 108131921 -32184844 - L1MB8 LINE L1 -357 5764 5679 246 95 0 0 chr10 108131921 108131963 -32184802 + (TA)n Simple_repeat Simple_repeat 2 43 0 261 273 37 15 chr10 108131963 108132017 -32184748 - L1MB8 LINE L1 -442 5679 5628 489 301 71 0 chr10 108132344 108132517 -32184248 + L1MB7 LINE L1 5456 5637 -529 3353 34 34 9 chr10 108132519 108132955 -32183810 - L1PA5 LINE L1 0 6154 5708 219 69 0 0 chr10 108133029 108133058 -32183707 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 442 275 174 23 chr10 108133181 108133399 -32183366 - MLT1I LTR MaLR -2 407 157 1900 146 0 20 chr10 108133399 108133741 -32183024 + L1MB7 LINE L1 5794 6128 -56 708 161 42 0 chr10 108133762 108133880 -32182885 - FLAM_C SINE Alu -19 124 2 260 194 0 6 chr10 108133880 108133944 -32182821 + L1MB7 LINE L1 6105 6166 0 588 195 23 8 chr10 108133963 108134091 -32182674 - MLT1I LTR MaLR -278 131 2 227 281 111 33 chr10 108134112 108134265 -32182500 + L1MC/D LINE L1 5762 5926 -1882 316 310 63 26 chr10 108134659 108134899 -32181866 - L1ME3 LINE L1 -241 5929 5685 260 146 0 21 chr10 108134989 108135042 -32181723 - L1ME3 LINE L1 -635 5534 5480 223 269 0 0 chr10 108135839 108135891 -32180874 + L2 LINE L2 3219 3270 -2 395 264 34 34 chr10 108137505 108137653 -32179112 - MIR SINE MIR -106 156 9 186 260 55 41 chr10 108137659 108137732 -32179033 - L2 LINE L2 -87 3185 3112 517 247 119 31 chr10 108137818 108138012 -32178753 - MIR SINE MIR -32 230 20 343 287 0 11 chr10 108138591 108138678 -32178087 - L2 LINE L2 -1 3312 3227 453 271 90 7 chr10 108139003 108139147 -32177618 + MIR SINE MIR 2 157 -105 2600 57 0 0 chr10 108139361 108139661 -32177104 + AluY SINE Alu 1 300 -11 379 246 60 15 chr10 108139742 108139876 -32176889 + L3 LINE CR1 584 723 -854 312 174 0 0 chr10 108139918 108139987 -32176778 + L1M4 LINE L1 4345 4413 -1733 350 212 24 0 chr10 108139992 108140077 -32176688 - L1MB2 LINE L1 -124 6047 5961 1668 169 55 0 chr10 108140336 108140609 -32176156 + AluSx SINE Alu 1 288 -24 324 280 40 16 chr10 108140825 108140950 -32175815 + L3 LINE CR1 1257 1384 -193 517 279 42 51 chr10 108141704 108141919 -32174846 + MIR SINE MIR 21 233 -29 620 289 73 39 chr10 108142271 108142683 -32174082 - L1MB2 LINE L1 -411 5710 5285 2183 119 44 0 chr10 108143233 108143526 -32173239 + AluSx SINE Alu 1 306 -6 1940 142 0 44 chr10 108143557 108143874 -32172891 + AluJb SINE Alu 1 303 -9 2128 108 56 0 chr10 108143996 108144284 -32172481 + AluSx SINE Alu 2 305 -7 681 293 15 5 chr10 108144286 108144491 -32172274 - MIR SINE MIR -6 256 50 339 295 75 78 chr10 108145898 108146311 -32170454 + L2 LINE L2 2838 3249 -23 1876 144 29 34 chr10 108147328 108147709 -32169056 - L1MB8 LINE L1 -6 6172 5794 1703 96 3 73 chr10 108147709 108147788 -32168977 + L1PA14 LINE L1 5882 5965 -196 2096 106 0 0 chr10 108147788 108148052 -32168713 + AluSx SINE Alu 6 269 -43 1703 96 3 73 chr10 108148052 108148272 -32168493 + L1PA14 LINE L1 5965 6161 0 1856 123 43 63 chr10 108148280 108148582 -32168183 + AluSx SINE Alu 1 296 -16 2584 177 11 52 chr10 108148582 108149135 -32167630 - L1MB8 LINE L1 -377 5801 5272 2170 186 37 18 chr10 108149138 108149505 -32167260 - L1MA9 LINE L1 -31 6281 5901 2411 107 0 0 chr10 108149505 108149815 -32166950 - AluSg SINE Alu 0 310 1 2170 186 37 18 chr10 108149815 108149937 -32166828 - L1MA9 LINE L1 -411 5901 5783 338 117 50 33 chr10 108149938 108150058 -32166707 + (TA)n Simple_repeat Simple_repeat 1 122 0 1331 181 15 25 chr10 108150065 108150391 -32166374 - L1MB8 LINE L1 -860 5286 4964 362 307 238 12 chr10 108150465 108150709 -32166056 + L2 LINE L2 3006 3304 -9 753 305 92 10 chr10 108150807 108151102 -32165663 - L3 LINE CR1 -80 1497 1179 204 67 0 0 chr10 108151394 108151424 -32165341 + (T)n Simple_repeat Simple_repeat 1 30 0 518 224 151 13 chr10 108151461 108151613 -32165152 - MER5B DNA MER1_type -1 177 5 276 292 124 57 chr10 108151755 108151806 -32164959 - L1ME4a LINE L1 -10 6111 6065 2067 140 3 7 chr10 108151806 108152113 -32164652 + AluJo SINE Alu 1 306 -6 276 292 124 57 chr10 108152113 108152581 -32164184 - L1ME4a LINE L1 -56 6065 5556 278 211 155 63 chr10 108153467 108153609 -32163156 - MIR SINE MIR -11 251 97 743 311 22 13 chr10 108153826 108154054 -32162711 + MIR SINE MIR 20 249 -13 649 180 12 0 chr10 108154440 108154612 -32162153 + (TG)n Simple_repeat Simple_repeat 2 175 0 278 374 92 10 chr10 108154714 108154909 -32161856 - MIR SINE MIR -3 259 49 204 320 39 13 chr10 108155287 108155365 -32161400 - MIR SINE MIR -66 196 117 2016 114 7 21 chr10 108155435 108155725 -32161040 + AluSx SINE Alu 1 286 -26 321 26 0 0 chr10 108155727 108155765 -32161000 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 2186 126 3 0 chr10 108156873 108157175 -32159590 + AluSx SINE Alu 1 303 -9 587 319 6 6 chr10 108157741 108157904 -32158861 - MER91A DNA MER1_type -32 164 2 245 208 0 0 chr10 108159547 108159595 -32157170 - Alu SINE Alu -167 135 88 1292 182 18 9 chr10 108159595 108159815 -32156950 - AluJo SINE Alu -90 222 1 233 218 18 0 chr10 108159900 108159955 -32156810 + MIR SINE MIR 31 86 -122 2390 94 0 3 chr10 108160802 108161109 -32155656 + AluY SINE Alu 1 306 -5 3374 137 53 20 chr10 108161114 108161700 -32155065 + MER4B LTR ERV1 1 605 -5 747 286 31 39 chr10 108161761 108162020 -32154745 + MIR SINE MIR 6 262 0 184 250 25 117 chr10 108162534 108162654 -32154111 + MER5A DNA MER1_type 79 187 -2 262 209 23 70 chr10 108163110 108163196 -32153569 - L2 LINE L2 -5 3267 3186 336 351 63 17 chr10 108163227 108163401 -32153364 + MER5A DNA MER1_type 8 189 0 2320 113 0 0 chr10 108163420 108163721 -32153044 + AluSx SINE Alu 1 301 -11 231 36 0 0 chr10 108163853 108163881 -32152884 + (TG)n Simple_repeat Simple_repeat 2 29 0 677 268 85 67 chr10 108164751 108165187 -32151578 - MLT1K LTR MaLR -4 584 141 410 342 70 0 chr10 108166250 108166437 -32150328 + MIR SINE MIR 4 203 -59 1116 155 12 0 chr10 108166944 108167112 -32149653 + FRAM SINE Alu 1 162 -14 816 165 5 60 chr10 108168178 108168262 -32148503 - MER53 DNA DNA 0 189 102 2084 146 0 7 chr10 108168262 108168564 -32148201 + AluJb SINE Alu 3 302 -10 816 165 5 60 chr10 108168564 108168679 -32148086 - MER53 DNA DNA -87 102 1 2056 135 3 25 chr10 108169027 108169346 -32147419 - AluJb SINE Alu 0 312 1 653 123 18 0 chr10 108169466 108169580 -32147185 + CT-rich Low_complexity Low_complexity 1 116 0 386 300 14 50 chr10 108169582 108169722 -32147043 - L2 LINE L2 -22 3250 3116 855 138 31 129 chr10 108170134 108170358 -32146407 - MER3 DNA MER1_type 0 209 8 337 282 112 15 chr10 108171887 108172093 -32144672 + L1MC4a LINE L1 5708 5933 -1875 670 294 36 18 chr10 108172712 108172933 -32143832 + MIR SINE MIR 9 233 -29 410 250 81 76 chr10 108174523 108174570 -32142195 - MIR3 SINE MIR -6 202 157 374 226 9 178 chr10 108174570 108174800 -32141965 - MER117 DNA MER1_type -3 194 4 410 250 81 76 chr10 108174800 108174924 -32141841 - MIR3 SINE MIR -51 157 30 2531 47 3 3 chr10 108174970 108175268 -32141497 + AluY SINE Alu 1 298 -13 243 0 0 0 chr10 108175866 108175893 -32140872 + (TG)n Simple_repeat Simple_repeat 2 28 0 2393 69 0 47 chr10 108176522 108176839 -32139926 - AluSx SINE Alu -10 302 1 377 279 71 14 chr10 108177075 108177215 -32139550 + MIR SINE MIR 37 184 -78 204 294 32 48 chr10 108178230 108178356 -32138409 + MER5A DNA MER1_type 44 167 -22 402 303 23 95 chr10 108178620 108178735 -32138030 - MIR SINE MIR -16 246 124 1535 205 20 7 chr10 108178735 108179037 -32137728 - AluJo SINE Alu -2 310 5 402 303 23 95 chr10 108179037 108179185 -32137580 - MIR SINE MIR -138 124 2 223 180 20 0 chr10 108179383 108179433 -32137332 + CT-rich Low_complexity Low_complexity 2 52 0 310 200 0 24 chr10 108180625 108180710 -32136055 + CT-rich Low_complexity Low_complexity 1 83 0 804 309 49 49 chr10 108181945 108182580 -32134185 + L2 LINE L2 2503 3138 -175 816 109 55 16 chr10 108182580 108182708 -32134057 - FLAM_C SINE Alu 0 133 1 804 309 49 49 chr10 108182708 108182885 -32133880 + L2 LINE L2 3138 3313 0 280 323 223 0 chr10 108183085 108183215 -32133550 - MER5A DNA MER1_type -6 183 25 194 268 82 21 chr10 108183400 108183497 -32133268 + L3 LINE CR1 1391 1493 -84 692 290 177 20 chr10 108183873 108184218 -32132547 - MLT1J1 LTR MaLR 0 446 48 1760 108 4 0 chr10 108186105 108186354 -32130411 + AluSx SINE Alu 50 299 -13 549 292 96 0 chr10 108186763 108186941 -32129824 - MIR SINE MIR -12 250 56 271 256 13 103 chr10 108187020 108187081 -32129684 - MIR SINE MIR -19 243 178 2242 71 3 14 chr10 108187081 108187376 -32129389 - AluY SINE Alu -19 292 1 271 256 13 103 chr10 108187376 108187470 -32129295 - MIR SINE MIR -84 178 102 346 271 64 26 chr10 108187496 108187679 -32129086 - MIR SINE MIR -51 211 19 622 259 0 0 chr10 108188190 108188333 -32128432 - MIR SINE MIR 0 262 120 2667 152 37 18 chr10 108188487 108188941 -32127824 + MLT1C LTR MaLR 1 463 -4 426 69 0 0 chr10 108188952 108189010 -32127755 + (CA)n Simple_repeat Simple_repeat 2 59 0 1870 146 0 29 chr10 108189010 108189319 -32127446 - AluJb SINE Alu -12 300 1 563 223 9 0 chr10 108189331 108189443 -32127322 + MLT1D LTR MaLR 259 371 -134 244 229 108 0 chr10 108190395 108190478 -32126287 + L1MDb LINE L1 1224 1315 -5094 978 278 109 17 chr10 108190742 108191387 -32125378 + L1ME LINE L1 1014 1673 -4869 1654 177 17 7 chr10 108191389 108191683 -32125082 + AluJb SINE Alu 1 297 -15 2290 103 0 3 chr10 108191683 108191995 -32124770 + AluSx SINE Alu 1 311 -1 2232 103 3 3 chr10 108192170 108192482 -32124283 - AluSq SINE Alu -1 312 1 450 36 0 0 chr10 108193629 108193685 -32123080 + (TG)n Simple_repeat Simple_repeat 2 57 0 1553 126 84 19 chr10 108193691 108193954 -32122811 - AluSx SINE Alu -32 280 1 196 270 14 68 chr10 108193973 108194047 -32122718 + L2 LINE L2 3203 3272 0 442 276 17 0 chr10 108194531 108194647 -32122118 + L1ME4a LINE L1 5666 5783 -338 1464 199 31 3 chr10 108194925 108195211 -32121554 + AluJo SINE Alu 3 296 -16 308 303 66 59 chr10 108195284 108195436 -32121329 + L1ME4a LINE L1 5955 6107 -14 2007 112 58 0 chr10 108195692 108195986 -32120779 + AluSx SINE Alu 1 311 -1 183 156 0 0 chr10 108196189 108196221 -32120544 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 432 0 0 0 chr10 108196241 108196289 -32120476 + (CA)n Simple_repeat Simple_repeat 1 48 0 1876 141 168 0 chr10 108196307 108196677 -32120088 + MSTB1 LTR MaLR 1 432 0 1016 260 175 9 chr10 108196677 108197346 -32119419 + L2 LINE L2 2545 3311 -2 345 258 133 39 chr10 108197348 108197476 -32119289 - MIR3 SINE MIR -34 174 35 228 35 0 0 chr10 108197589 108197618 -32119147 + (A)n Simple_repeat Simple_repeat 1 29 0 229 229 52 52 chr10 108198405 108198501 -32118264 + MER5A DNA MER1_type 94 189 0 330 251 123 49 chr10 108198919 108199082 -32117683 - MIR SINE MIR -87 175 1 225 305 35 43 chr10 108200048 108200189 -32116576 - L2 LINE L2 -168 3104 2965 817 252 43 35 chr10 108200219 108200449 -32116316 + MIR SINE MIR 31 262 0 486 274 60 27 chr10 108200447 108200673 -32116092 - MIR SINE MIR -15 247 7 * 251 289 89 0 chr10 108200733 108200823 -32115942 + MIR SINE MIR 163 260 -2 1395 237 82 41 chr10 108201347 108201786 -32114979 - LTR16A1 LTR ERVL 0 457 1 1989 132 3 19 chr10 108203100 108203411 -32113354 + AluSx SINE Alu 5 310 -2 188 296 270 13 chr10 108203413 108203565 -32113200 - MIR SINE MIR -16 246 56 237 136 68 0 chr10 108204006 108204065 -32112700 - L1MD3 LINE L1 0 7995 7933 452 191 11 2 chr10 108204156 108204262 -32112503 - L1MC4a LINE L1 -81 7914 7637 725 200 0 15 chr10 108204567 108204702 -32112063 + FLAM_A SINE Alu 1 133 0 186 159 68 0 chr10 108204759 108204847 -32111918 + (TA)n Simple_repeat Simple_repeat 1 94 0 1943 141 0 3 chr10 108204847 108205137 -32111628 - AluJb SINE Alu -23 289 1 1291 250 64 9 chr10 108205167 108205495 -32111270 - LTR40a LTR ERVL -167 352 7 621 302 170 25 chr10 108206813 108207207 -32109558 - L2 LINE L2 0 3313 2863 241 248 118 57 chr10 108208492 108208738 -32108027 - L2 LINE L2 -632 2682 2422 772 194 0 0 chr10 108209864 108209993 -32106772 + FLAM_A SINE Alu 5 133 0 253 292 130 50 chr10 108209995 108210156 -32106609 + MIR SINE MIR 57 230 -32 490 259 177 0 chr10 108210306 108210464 -32106301 + MER5A DNA MER1_type 4 189 0 946 137 16 66 chr10 108211055 108211237 -32105528 + FRAM SINE Alu 1 172 -4 473 283 164 23 chr10 108211683 108211902 -32104863 - MIR SINE MIR -1 261 12 2123 108 0 49 chr10 108211902 108212226 -32104539 - AluSx SINE Alu -4 308 1 369 333 0 0 chr10 108212957 108213062 -32103703 + MIR3 SINE MIR 94 198 -10 224 270 71 56 chr10 108213693 108213800 -32102965 + MIR SINE MIR 25 147 -71 1028 235 34 0 chr10 108213849 108214087 -32102678 + MIR SINE MIR 15 260 -2 282 270 0 27 chr10 108214105 108214179 -32102586 + L2 LINE L2 3242 3313 0 304 263 35 18 chr10 108214666 108214780 -32101985 + MIR3 SINE MIR 7 122 -86 252 387 17 29 chr10 108214808 108214981 -32101784 - MER5A DNA MER1_type 0 189 19 2285 182 110 28 chr10 108215009 108215071 -32101694 - MLT1F LTR MaLR 0 542 486 1720 169 7 7 chr10 108215071 108215372 -32101393 + AluJb SINE Alu 1 301 -11 2285 182 110 28 chr10 108215372 108215810 -32100955 - MLT1F LTR MaLR -56 486 1 232 345 35 0 chr10 108216020 108216136 -32100629 + MIR3 SINE MIR 54 173 -35 234 116 68 4 chr10 108216247 108216455 -32100310 + AluSx SINE Alu 1 301 -1 287 278 24 8 chr10 108216684 108216810 -32099955 + L2 LINE L2 2880 3007 -265 206 244 209 0 chr10 108216881 108216967 -32099798 + L2 LINE L2 3162 3265 -7 800 248 5 35 chr10 108217130 108217332 -32099433 + MIR SINE MIR 57 252 -10 844 145 0 0 chr10 108217474 108217598 -32099167 + FLAM_C SINE Alu 1 124 -19 198 0 0 0 chr10 108217599 108217621 -32099144 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 242 287 261 9 chr10 108218584 108218814 -32097951 - L2 LINE L2 -340 2974 2687 1818 136 43 7 chr10 108218815 108219116 -32097649 + AluJb SINE Alu 1 312 0 450 362 32 5 chr10 108219849 108220034 -32096731 - MIR SINE MIR -12 250 61 1336 252 56 31 chr10 108220035 108220512 -32096253 - MLT1K LTR MaLR 0 588 55 2447 63 3 0 chr10 108220971 108221274 -32095491 + AluSp SINE Alu 1 304 -9 1467 168 79 4 chr10 108221753 108222033 -32094732 + AluJo SINE Alu 1 301 -11 1453 204 52 86 chr10 108222864 108223263 -32093502 + MLT1C LTR MaLR 6 388 -79 1800 135 7 14 chr10 108223263 108223551 -32093214 - AluJb SINE Alu -16 296 11 1453 204 52 86 chr10 108223551 108223617 -32093148 + MLT1C LTR MaLR 388 455 -12 573 297 83 74 chr10 108224165 108224586 -32092179 + L2 LINE L2 2888 3312 -1 249 83 0 0 chr10 108224587 108224623 -32092142 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 304 226 0 0 chr10 108225024 108225086 -32091679 + L2 LINE L2 2753 2814 -500 602 318 15 5 chr10 108225132 108225327 -32091438 + MIR SINE MIR 47 243 -19 251 283 11 11 chr10 108225430 108225522 -32091243 - MIR SINE MIR -74 134 43 201 74 0 0 chr10 108225946 108225973 -32090792 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 1981 106 7 0 chr10 108226359 108226632 -32090133 + AluSp SINE Alu 29 303 -10 996 239 205 18 chr10 108227677 108228008 -32088757 + LTR16C LTR ERVL 99 491 0 970 231 130 92 chr10 108228116 108228584 -32088181 - MLT1K LTR MaLR -15 573 88 696 248 64 47 chr10 108230351 108230585 -32086180 + MIR SINE MIR 25 262 0 2065 137 0 0 chr10 108230650 108230957 -32085808 - AluSx SINE Alu -5 307 1 281 81 0 0 chr10 108230971 108231008 -32085757 - Alu SINE Alu -15 287 251 611 178 51 0 chr10 108231251 108231369 -32085396 + MIR SINE MIR 48 171 -91 1075 177 86 18 chr10 108231418 108231666 -32085099 + AluJo SINE Alu 52 314 0 208 244 0 0 chr10 108233920 108233965 -32082800 + L2 LINE L2 2707 2751 -563 2019 141 0 0 chr10 108233965 108234264 -32082501 + AluJb SINE Alu 3 301 -11 21 36 0 0 chr10 108235126 108235154 -32081611 + AT_rich Low_complexity Low_complexity 1 28 0 198 143 0 0 chr10 108235172 108235207 -32081558 + (A)n Simple_repeat Simple_repeat 1 35 0 972 215 30 30 chr10 108235945 108236133 -32080632 - L1 LINE L1 -2572 4595 4411 1998 106 7 0 chr10 108236133 108236435 -32080330 - AluSg SINE Alu 0 310 7 972 215 30 30 chr10 108236435 108236573 -32080192 - L1 LINE L1 -2756 4411 4275 2778 127 96 29 chr10 108236573 108236912 -32079853 - MER41B LTR ERV1 -88 547 161 2232 115 0 6 chr10 108236912 108237226 -32079539 - AluSx SINE Alu 0 312 1 2778 127 96 29 chr10 108237226 108237399 -32079366 - MER41B LTR ERV1 -474 161 1 2074 123 14 41 chr10 108237401 108237569 -32079196 - MER41B-int LTR ERV1 -3 5943 5772 2233 107 0 16 chr10 108237569 108237705 -32079060 + AluSx SINE Alu 1 138 -174 2225 109 6 0 chr10 108237705 108238016 -32078749 + AluSq SINE Alu 1 313 0 2233 107 0 16 chr10 108238016 108238196 -32078569 + AluSx SINE Alu 138 312 0 2074 123 14 41 chr10 108238196 108238392 -32078373 - MER41B-int LTR ERV1 -174 5772 5589 5473 122 29 10 chr10 108238492 108239415 -32077350 - MER41B-int LTR ERV1 -367 5579 4639 533 149 23 11 chr10 108239410 108239497 -32077268 - MER41B-int LTR ERV1 -5858 88 1 * 1041 173 15 10 chr10 108239497 108239699 -32077066 - MER41B LTR ERV1 0 635 433 11456 176 33 61 chr10 108239699 108240187 -32076578 - L1 LINE L1 -2867 4300 3800 1867 123 53 0 chr10 108240187 108240471 -32076294 - AluSx SINE Alu -13 299 1 11456 176 33 61 chr10 108240471 108240574 -32076191 - L1 LINE L1 -3367 3800 3696 2106 115 3 0 chr10 108240574 108240861 -32075904 + AluSg SINE Alu 3 290 -20 11456 176 33 61 chr10 108240861 108241039 -32075726 - L1 LINE L1 -3471 3696 3514 834 160 8 0 chr10 108241039 108241170 -32075595 - FLAM_C SINE Alu -1 132 1 1522 170 58 11 chr10 108241175 108241451 -32075314 - AluJo SINE Alu -23 289 1 11456 176 33 61 chr10 108241451 108242546 -32074219 - L1 LINE L1 -3657 3510 2386 2248 103 0 3 chr10 108242546 108242858 -32073907 - AluY SINE Alu 0 311 1 11456 176 33 61 chr10 108242858 108242991 -32073774 - L1 LINE L1 -4781 2386 2251 2199 109 0 10 chr10 108242991 108243168 -32073597 - AluSp SINE Alu -3 310 136 2425 57 0 0 chr10 108243168 108243467 -32073298 - AluY SINE Alu -12 299 1 2199 109 0 10 chr10 108243467 108243602 -32073163 - AluSp SINE Alu -177 136 1 11456 176 33 61 chr10 108243602 108245893 -32070872 - L1 LINE L1 -4916 2251 137 2075 94 0 0 chr10 108245893 108246169 -32070596 + AluSq SINE Alu 1 276 -37 11456 176 33 61 chr10 108246169 108246279 -32070486 - L1 LINE L1 -7030 137 25 3751 108 28 39 chr10 108246376 108246994 -32069771 - L1MB3 LINE L1 -7 6176 5566 1996 113 21 0 chr10 108247043 108247325 -32069440 - AluJb SINE Alu -24 288 1 983 229 28 86 chr10 108247358 108247720 -32069045 - L1ME1 LINE L1 -5 6161 5821 1030 124 0 7 chr10 108247720 108247897 -32068868 - AluSg/x SINE Alu 0 304 129 2085 117 0 0 chr10 108247920 108248210 -32068555 + AluSx SINE Alu 1 290 -22 2227 107 0 0 chr10 108248266 108248575 -32068190 - AluSx SINE Alu 0 312 4 1899 166 3 0 chr10 108248575 108248877 -32067888 - AluJb SINE Alu -9 303 1 848 168 51 9 chr10 108248879 108249093 -32067672 - L1ME1 LINE L1 -749 5397 5175 894 277 30 70 chr10 108249361 108249790 -32066975 + MLT1J LTR MaLR 100 511 0 2121 116 0 25 chr10 108249902 108250221 -32066544 - AluSx SINE Alu -1 311 1 23 33 0 0 chr10 108250381 108250411 -32066354 + AT_rich Low_complexity Low_complexity 1 30 0 1316 266 45 25 chr10 108250836 108250882 -32065883 - LTR16B LTR ERVL 0 464 420 243 61 0 0 chr10 108250882 108250915 -32065850 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1316 266 45 25 chr10 108250915 108251315 -32065450 - LTR16B LTR ERVL -44 420 9 668 283 144 35 chr10 108251367 108251779 -32064986 - MLT1L LTR MaLR -8 580 151 345 235 137 78 chr10 108251798 108251888 -32064877 - MER5B DNA MER1_type -16 162 58 1789 167 7 10 chr10 108251888 108252194 -32064571 - AluJo SINE Alu -7 305 1 345 235 137 78 chr10 108252194 108252256 -32064509 - MER5B DNA MER1_type -120 58 1 422 264 24 16 chr10 108252306 108252431 -32064334 + MIR SINE MIR 69 194 -68 202 233 23 0 chr10 108253123 108253166 -32063599 + CT-rich Low_complexity Low_complexity 2 45 0 185 316 62 57 chr10 108253442 108253619 -32063146 - L2 LINE L2 -339 2975 2798 426 182 34 0 chr10 108254143 108254231 -32062534 - MIR3 SINE MIR -50 158 68 843 220 6 6 chr10 108255640 108255813 -32060952 - AluJo SINE Alu -17 295 123 246 288 71 47 chr10 108255912 108256082 -32060683 + MIR SINE MIR 22 195 -67 286 346 9 9 chr10 108256154 108256261 -32060504 + MIR SINE MIR 28 134 -128 248 209 45 15 chr10 108256513 108256580 -32060185 + MIR SINE MIR 23 91 -171 560 283 190 15 chr10 108256664 108256869 -32059896 - MIR SINE MIR -21 241 1 263 233 35 47 chr10 108257832 108257918 -32058847 + MIR SINE MIR 176 260 -2 2237 91 3 0 chr10 108257957 108258254 -32058511 - AluSq SINE Alu -15 298 1 187 366 109 0 chr10 108258403 108258504 -32058261 - MIR SINE MIR -57 205 94 281 281 31 10 chr10 108259491 108259587 -32057178 + MIR SINE MIR 48 145 -63 504 259 176 5 chr10 108260390 108260595 -32056170 + MIR SINE MIR 22 261 -1 196 244 0 0 chr10 108260819 108260864 -32055901 + L2 LINE L2 3228 3272 0 2346 85 0 3 chr10 108260929 108261235 -32055530 - AluSx SINE Alu -7 305 1 522 304 139 37 chr10 108261797 108262381 -32054384 + L2 LINE L2 2633 3271 -1 510 284 47 0 chr10 108262785 108262933 -32053832 + MIR SINE MIR 108 262 0 344 333 0 0 chr10 108263587 108263692 -32053073 + MIR SINE MIR 51 155 -107 472 219 77 162 chr10 108264127 108264374 -32052391 + MIR SINE MIR 1 226 -36 318 306 48 16 chr10 108264410 108264534 -32052231 + L2 LINE L2 3142 3269 -3 247 255 33 33 chr10 108264725 108264878 -32051887 + (CGGG)n Simple_repeat Simple_repeat 4 156 0 312 300 56 50 chr10 108266622 108266777 -32049988 + MIR SINE MIR 22 180 -82 884 130 8 8 chr10 108266777 108266908 -32049857 + FLAM_C SINE Alu 1 131 -2 312 300 56 50 chr10 108266908 108266932 -32049833 + MIR SINE MIR 180 202 -60 1987 107 4 4 chr10 108267503 108267809 -32048956 - AluSg SINE Alu 0 306 1 405 0 0 0 chr10 108268135 108268180 -32048585 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 281 0 16 chr10 108268393 108268457 -32048308 + CT-rich Low_complexity Low_complexity 1 63 0 289 254 35 84 chr10 108268579 108268721 -32048044 - MIR3 SINE MIR -16 192 58 188 333 67 9 chr10 108268924 108269029 -32047736 + L2 LINE L2 3155 3265 -7 671 259 60 5 chr10 108269210 108269411 -32047354 + MIR SINE MIR 50 261 -1 669 211 0 20 chr10 108269462 108269715 -32047050 + (CA)n Simple_repeat Simple_repeat 1 247 0 587 171 19 0 chr10 108270401 108270506 -32046259 + MIR SINE MIR 48 154 -108 1480 207 120 89 chr10 108270507 108270890 -32045875 - MLT1F LTR MaLR 0 542 137 2216 103 0 7 chr10 108270890 108271190 -32045575 - AluSq SINE Alu -10 303 6 1480 207 120 89 chr10 108271190 108271323 -32045442 - MLT1F LTR MaLR -405 137 10 497 297 62 68 chr10 108271653 108271736 -32045029 - L2 LINE L2 -4 3268 3186 2193 108 0 0 chr10 108271736 108272042 -32044723 + AluSg SINE Alu 3 308 -2 497 297 62 68 chr10 108272042 108272104 -32044661 - L2 LINE L2 -86 3186 3125 774 249 62 5 chr10 108272104 108272297 -32044468 - MER105 DNA DNA 0 204 1 497 297 62 68 chr10 108272297 108272487 -32044278 - L2 LINE L2 -147 3125 2934 611 290 5 16 chr10 108272880 108273091 -32043674 - MIR SINE MIR -56 206 3 201 171 0 0 chr10 108273285 108273320 -32043445 + (TAA)n Simple_repeat Simple_repeat 2 36 0 455 230 182 18 chr10 108273331 108273496 -32043269 - MIR SINE MIR -54 208 17 445 281 14 36 chr10 108274197 108274336 -32042429 + MIR3 SINE MIR 11 146 -62 1777 146 21 7 chr10 108275296 108275584 -32041181 - AluJb SINE Alu -20 292 1 518 197 17 19 chr10 108275584 108275712 -32041053 - L1ME1 LINE L1 -2 6164 6046 1271 153 4 31 chr10 108275712 108275941 -32040824 - AluJo SINE Alu -3 309 87 2118 216 48 10 chr10 108275941 108276460 -32040305 - L1ME1 LINE L1 -108 6058 5520 2229 112 0 3 chr10 108276602 108276915 -32039850 - AluSx SINE Alu 0 312 1 1705 140 10 49 chr10 108277023 108277330 -32039435 - AluJo SINE Alu -17 295 1 506 320 103 5 chr10 108277337 108277540 -32039225 + MIR SINE MIR 9 231 -31 623 209 16 0 chr10 108278163 108278292 -32038473 - L1MA10 LINE L1 -1 6333 6203 245 311 38 15 chr10 108278304 108278436 -32038329 - L1ME1 LINE L1 -92 6074 5940 2258 104 0 0 chr10 108278436 108278744 -32038021 - AluSx SINE Alu -2 310 3 446 264 14 27 chr10 108278863 108279011 -32037754 - L1MD2 LINE L1 -265 5901 5756 260 96 19 58 chr10 108279962 108280014 -32036751 - MIR SINE MIR -91 117 68 338 330 40 0 chr10 108280014 108280114 -32036651 + L2 LINE L2 3164 3267 -5 279 327 39 0 chr10 108281630 108281734 -32035031 - MER91A DNA MER1_type -85 111 4 300 308 242 19 chr10 108281771 108281982 -32034783 - MIR SINE MIR -1 261 4 414 243 10 63 chr10 108282212 108282340 -32034425 - MIR SINE MIR -83 125 3 232 269 228 35 chr10 108282375 108282546 -32034219 + MIR SINE MIR 41 244 -18 215 197 136 0 chr10 108283021 108283087 -32033678 + MIR SINE MIR 117 191 -71 327 293 115 29 chr10 108283974 108284148 -32032617 - MIR SINE MIR -66 196 8 303 340 0 0 chr10 108286167 108286264 -32030501 - MIR SINE MIR -68 140 44 586 271 77 0 chr10 108286998 108287179 -32029586 - MIR SINE MIR -29 233 39 313 235 0 0 chr10 108287519 108287587 -32029178 + MER116 DNA Mariner 1 68 -12 294 238 116 82 chr10 108287725 108287872 -32028893 + MIR SINE MIR 41 192 -70 317 335 151 11 chr10 108289075 108289254 -32027511 + L3 LINE CR1 1371 1574 -3 1950 139 0 13 chr10 108289291 108289601 -32027164 + AluSx SINE Alu 1 306 -6 223 265 0 0 chr10 108290611 108290660 -32026105 + L3 LINE CR1 818 866 -711 361 292 93 63 chr10 108290705 108290944 -32025821 - MIR SINE MIR -2 260 10 372 295 46 117 chr10 108290962 108291243 -32025522 - MIR SINE MIR 0 262 2 545 277 20 14 chr10 108291262 108291410 -32025355 + L3 LINE CR1 958 1106 -471 376 324 34 0 chr10 108291471 108291619 -32025146 + L3 LINE CR1 1314 1466 -111 190 317 239 24 chr10 108292512 108292679 -32024086 + MIR SINE MIR 3 205 -57 1802 134 40 7 chr10 108293065 108293364 -32023401 + AluJb SINE Alu 1 309 -3 313 233 73 40 chr10 108293399 108293549 -32023216 + L1ME4a LINE L1 5967 6121 0 203 349 0 0 chr10 108293754 108293817 -32022948 - L2 LINE L2 -7 3265 3203 21 0 0 0 chr10 108294103 108294124 -32022641 + GC_rich Low_complexity Low_complexity 1 21 0 2478 53 3 0 chr10 108295184 108295483 -32021282 + AluY SINE Alu 1 300 -11 180 321 60 0 chr10 108295498 108295582 -32021183 + MIR SINE MIR 104 192 -70 252 122 0 0 chr10 108295769 108295810 -32020955 + MER103 DNA DNA 52 92 -74 428 335 17 0 chr10 108295983 108296129 -32020636 - MER5A DNA MER1_type -24 165 1 1829 171 10 10 chr10 108296400 108296709 -32020056 + AluSx SINE Alu 3 311 -1 23 0 0 0 chr10 108296798 108296821 -32019944 + AT_rich Low_complexity Low_complexity 1 23 0 319 318 122 5 chr10 108297230 108297419 -32019346 + L1M4 LINE L1 3958 4168 -1978 2402 76 0 7 chr10 108297654 108297957 -32018808 + AluY SINE Alu 1 301 -10 229 321 179 0 chr10 108298139 108298245 -32018520 + L2 LINE L2 3146 3270 -2 270 211 11 53 chr10 108298247 108298296 -32018469 + GA-rich Low_complexity Low_complexity 2 47 -45 2062 108 10 7 chr10 108298296 108298593 -32018172 + AluSc SINE Alu 1 298 -11 270 211 11 53 chr10 108298593 108298638 -32018127 + GA-rich Low_complexity Low_complexity 47 92 0 766 254 12 0 chr10 108300348 108300513 -32016252 - MER91A DNA MER1_type -12 184 18 336 277 76 17 chr10 108301701 108301820 -32014945 + MIR SINE MIR 18 143 -65 1869 128 18 0 chr10 108303222 108303503 -32013262 + AluJo SINE Alu 13 298 -14 297 51 0 0 chr10 108306257 108306296 -32010469 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr10 108306295 108306318 -32010447 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 431 254 115 8 chr10 108308738 108308868 -32007897 + MIR3 SINE MIR 64 207 -1 21 0 0 0 chr10 108309155 108309176 -32007589 + AT_rich Low_complexity Low_complexity 1 21 0 200 83 0 28 chr10 108309612 108309648 -32007117 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 219 69 0 0 chr10 108312718 108312747 -32004018 + (GGA)n Simple_repeat Simple_repeat 3 31 0 255 261 130 0 chr10 108313515 108313607 -32003158 - MIR SINE MIR -112 150 47 303 313 7 47 chr10 108314995 108315145 -32001620 - MER103 DNA DNA -20 146 3 396 0 0 0 chr10 108315809 108315853 -32000912 + (CAT)n Simple_repeat Simple_repeat 2 45 0 1112 156 0 21 chr10 108315856 108316042 -32000723 - AluJo SINE Alu -27 285 104 243 0 0 0 chr10 108316064 108316091 -32000674 + (A)n Simple_repeat Simple_repeat 1 27 0 7192 55 14 18 chr10 108316092 108317802 -31998963 + SVA Other Other 1 1386 0 698 202 46 12 chr10 108317874 108318047 -31998718 + MLT1C LTR MaLR 289 467 0 455 274 151 17 chr10 108318080 108318259 -31998506 - L1M4 LINE L1 -1526 4620 4418 192 77 0 0 chr10 108318267 108318293 -31998472 + (A)n Simple_repeat Simple_repeat 1 26 0 705 125 125 0 chr10 108318294 108318398 -31998367 - AluJo SINE Alu -194 118 2 1616 163 35 7 chr10 108318511 108318608 -31998157 + AluJo SINE Alu 22 115 -197 213 39 0 0 chr10 108318608 108318634 -31998131 + (CA)n Simple_repeat Simple_repeat 1 26 0 1616 163 35 7 chr10 108318634 108318819 -31997946 + AluJo SINE Alu 115 312 0 471 298 8 8 chr10 108319193 108319314 -31997451 - L2 LINE L2 0 3313 3193 489 320 105 0 chr10 108319486 108319667 -31997098 + MIR SINE MIR 50 249 -13 447 291 33 13 chr10 108320217 108320368 -31996397 - MER117 DNA MER1_type -41 156 3 320 281 11 22 chr10 108321581 108321670 -31995095 + L2 LINE L2 3170 3257 -15 235 234 277 32 chr10 108323280 108323374 -31993391 + MIR SINE MIR 34 150 -58 1528 160 58 51 chr10 108323606 108323900 -31992865 + AluJo SINE Alu 1 296 -16 260 100 0 20 chr10 108324085 108324135 -31992630 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 195 368 145 20 chr10 108324659 108324811 -31991954 - MIR3 SINE MIR -5 203 33 432 0 0 0 chr10 108325115 108325163 -31991602 + (TG)n Simple_repeat Simple_repeat 2 49 0 203 81 0 54 chr10 108325650 108325687 -31991078 + (CGGGG)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr10 108330349 108330369 -31986396 + (GA)n Simple_repeat Simple_repeat 2 21 0 231 288 18 9 chr10 108330491 108330602 -31986163 + (TG)n Simple_repeat Simple_repeat 1 112 0 231 319 60 26 chr10 108332608 108332724 -31984041 - L2 LINE L2 -1 3271 3152 * 306 312 48 16 chr10 108332701 108332826 -31983939 + L2 LINE L2 3142 3270 -2 289 361 9 9 chr10 108333260 108333368 -31983397 + MIR SINE MIR 30 137 -71 479 274 175 22 chr10 108333569 108333799 -31982966 - MIR SINE MIR -22 240 4 196 371 14 0 chr10 108334004 108334074 -31982691 + MIR SINE MIR 44 114 -94 252 196 18 0 chr10 108334634 108334690 -31982075 + (CA)n Simple_repeat Simple_repeat 1 57 0 1943 151 10 0 chr10 108335242 108335541 -31981224 + AluSx SINE Alu 1 302 -10 255 61 0 0 chr10 108336238 108336271 -31980494 + (A)n Simple_repeat Simple_repeat 1 33 0 951 140 0 0 chr10 108336276 108336419 -31980346 + FLAM_C SINE Alu 1 143 0 535 167 103 56 chr10 108340267 108340393 -31976372 + FLAM_C SINE Alu 2 133 0 276 284 9 43 chr10 108340412 108340528 -31976237 + MLT1K LTR MaLR 411 522 -66 724 132 22 7 chr10 108340543 108340679 -31976086 - MER44D DNA MER2_type 0 705 568 1327 182 9 0 chr10 108340679 108340910 -31975855 + AluJo SINE Alu 65 297 -15 940 129 119 10 chr10 108340922 108341124 -31975641 - MER44D DNA MER2_type -115 494 1 896 103 0 0 chr10 108341478 108341595 -31975170 + FLAM_C SINE Alu 11 127 -16 887 189 0 0 chr10 108341660 108341808 -31974957 + AluJb SINE Alu 144 291 -21 2195 101 3 3 chr10 108342326 108342623 -31974142 + AluSc SINE Alu 1 297 -12 2091 131 7 0 chr10 108342768 108343073 -31973692 + AluSx SINE Alu 1 307 -5 2239 104 0 16 chr10 108343074 108343390 -31973375 + AluSx SINE Alu 2 312 0 224 312 70 42 chr10 108344017 108344174 -31972591 - MIR SINE MIR -32 230 11 524 316 17 11 chr10 108344399 108344576 -31972189 + MIR SINE MIR 37 214 -48 2333 82 0 3 chr10 108345759 108346062 -31970703 + AluY SINE Alu 1 302 -9 322 298 88 18 chr10 108346511 108346625 -31970140 + MIR SINE MIR 39 160 -102 330 253 25 0 chr10 108346677 108346756 -31970009 - L2 LINE L2 -5 3308 3228 756 252 102 10 chr10 108348154 108348360 -31968405 + MIR SINE MIR 1 225 -37 2498 81 0 0 chr10 108348962 108349271 -31967494 + AluSc SINE Alu 1 309 0 2270 110 0 0 chr10 108349665 108349974 -31966791 + AluSx SINE Alu 1 309 -3 182 338 120 56 chr10 108350625 108350841 -31965924 + L3 LINE CR1 630 859 -718 489 170 38 9 chr10 108351606 108351712 -31965053 - Tigger5 DNA MER2_type 0 2323 2215 252 188 0 0 chr10 108351704 108351752 -31965013 - Tigger5 DNA MER2_type -2268 55 8 * 717 269 132 14 chr10 108351791 108352156 -31964609 + MER113 DNA MER1_type? 110 517 -4 198 0 0 0 chr10 108352288 108352310 -31964455 + (GAAAA)n Simple_repeat Simple_repeat 2 23 0 821 292 40 35 chr10 108352977 108353378 -31963387 + MER113 DNA MER1_type? 54 456 -65 2274 83 0 13 chr10 108353462 108353775 -31962990 + AluY SINE Alu 1 309 -2 1985 130 3 23 chr10 108353930 108354237 -31962528 + AluJb SINE Alu 1 301 -11 374 248 91 8 chr10 108354426 108354547 -31962218 - MIR SINE MIR -82 180 50 309 336 73 7 chr10 108355579 108355716 -31961049 + MIR SINE MIR 102 247 -15 330 263 169 8 chr10 108356277 108356395 -31960370 + L2 LINE L2 3136 3272 0 403 294 14 42 chr10 108358904 108359047 -31957718 - MIR3 SINE MIR -50 158 20 199 47 0 93 chr10 108359794 108359837 -31956928 + (CAG)n Simple_repeat Simple_repeat 2 40 0 215 271 29 29 chr10 108359950 108360020 -31956745 + MIR SINE MIR 63 132 -76 282 255 106 11 chr10 108360523 108360617 -31956148 + L2 LINE L2 3168 3270 -2 371 303 19 39 chr10 108361204 108361359 -31955406 + MIR SINE MIR 70 221 -41 224 314 210 12 chr10 108362645 108362893 -31953872 + L2 LINE L2 3015 3311 -2 240 364 54 8 chr10 108363988 108364117 -31952648 - MIR3 SINE MIR -11 197 63 210 327 0 0 chr10 108364136 108364188 -31952577 - MIR SINE MIR -2 260 209 769 196 0 7 chr10 108364189 108364206 -31952559 - AluJo SINE Alu -175 137 121 186 43 0 0 chr10 108364206 108364229 -31952536 + (TTA)n Simple_repeat Simple_repeat 2 24 0 769 196 0 7 chr10 108364229 108364349 -31952416 - AluJo SINE Alu -191 121 1 488 241 68 58 chr10 108364352 108364543 -31952222 - MIR SINE MIR -68 194 2 2162 137 0 0 chr10 108365123 108365430 -31951335 + AluSx SINE Alu 1 307 -5 2334 80 7 0 chr10 108366180 108366479 -31950286 + AluSq SINE Alu 1 301 -12 194 339 15 31 chr10 108368419 108368484 -31948281 - L3b LINE CR1 -5 1578 1515 274 269 64 0 chr10 108368495 108368573 -31948192 - MIR SINE MIR -113 149 67 249 250 12 12 chr10 108370957 108371037 -31945728 + G-rich Low_complexity Low_complexity 2 81 0 183 273 148 23 chr10 108371874 108371962 -31944803 + MIR SINE MIR 35 133 -129 23 0 0 0 chr10 108371971 108371994 -31944771 + GC_rich Low_complexity Low_complexity 1 23 0 2837 6 0 0 chr10 108372019 108372331 -31944434 - AluYb8 SINE Alu -6 312 1 1933 148 14 0 chr10 108372446 108372736 -31944029 - AluJb SINE Alu -17 295 2 425 240 88 53 chr10 108373135 108373306 -31943459 - MER5B DNA MER1_type 0 178 2 486 288 112 6 chr10 108374016 108374186 -31942579 - MIR SINE MIR -70 192 5 2242 108 0 19 chr10 108374289 108374605 -31942160 - AluSx SINE Alu -2 310 1 240 337 0 31 chr10 108374607 108374705 -31942060 + L2 LINE L2 3177 3271 -1 520 289 50 11 chr10 108376191 108376371 -31940394 + MIR SINE MIR 10 196 -66 214 247 13 26 chr10 108376878 108376955 -31939810 - MIR SINE MIR -98 110 35 345 343 0 0 chr10 108377928 108378036 -31938729 - MIR SINE MIR -148 114 7 225 200 0 0 chr10 108378967 108379012 -31937753 + MIR SINE MIR 112 156 -106 356 333 28 21 chr10 108379156 108379300 -31937465 - MIR SINE MIR -28 234 90 765 254 22 5 chr10 108379470 108379655 -31937110 - MIR SINE MIR 0 262 75 698 240 107 24 chr10 108379828 108380072 -31936693 + MIR SINE MIR 2 254 -8 894 203 11 0 chr10 108380826 108381008 -31935757 - MER58A DNA MER1_type -21 203 20 260 307 24 123 chr10 108381523 108381639 -31935126 + MIR3 SINE MIR 4 91 -117 2052 106 14 0 chr10 108381639 108381931 -31934834 + AluSx SINE Alu 1 296 -16 260 307 24 123 chr10 108381931 108382026 -31934739 + MIR3 SINE MIR 91 194 -14 328 281 71 71 chr10 108382188 108382384 -31934381 + MIR SINE MIR 21 216 -46 576 170 47 0 chr10 108382790 108382896 -31933869 + HY1 scRNA scRNA 1 111 -1 1951 141 3 3 chr10 108382914 108383218 -31933547 + AluJo SINE Alu 1 304 -8 2233 115 0 6 chr10 108384172 108384543 -31932222 + AluSg SINE Alu 1 369 0 632 260 30 6 chr10 108384795 108384964 -31931801 + MER45A DNA AcHobo 1 173 -5 337 211 0 0 chr10 108385184 108385255 -31931510 - MIR SINE MIR -84 124 54 483 240 172 62 chr10 108385271 108385393 -31931372 - MIR SINE MIR -12 250 98 2144 110 13 0 chr10 108385393 108385692 -31931073 + AluSq SINE Alu 1 303 -10 483 240 172 62 chr10 108385692 108385761 -31931004 - MIR SINE MIR -164 98 38 233 192 58 0 chr10 108387291 108387343 -31929422 + L2 LINE L2 3255 3309 -4 246 366 22 15 chr10 108388133 108388267 -31928498 + MIR SINE MIR 18 152 -56 203 333 58 58 chr10 108388792 108388948 -31927817 + L2 LINE L2 3085 3240 -32 2257 103 3 0 chr10 108389600 108389911 -31926854 - AluSx SINE Alu 0 312 1 1826 154 20 0 chr10 108389915 108390208 -31926557 - AluJb SINE Alu -12 300 2 1671 135 85 0 chr10 108391118 108391377 -31925388 + AluSg SINE Alu 1 281 -29 21 0 0 0 chr10 108391385 108391406 -31925359 + GC_rich Low_complexity Low_complexity 1 21 0 808 164 7 53 chr10 108391426 108391578 -31925187 + AluJb SINE Alu 1 145 -167 264 220 34 0 chr10 108391580 108391639 -31925126 - MER5A DNA MER1_type -74 115 55 2212 112 0 3 chr10 108392108 108392412 -31924353 + AluSg SINE Alu 1 303 -7 1460 177 6 85 chr10 108392710 108392873 -31923892 + AluJo SINE Alu 1 127 -185 1564 159 43 4 chr10 108392873 108393150 -31923615 + AluSx SINE Alu 11 298 -14 1460 177 6 85 chr10 108393150 108393314 -31923451 + AluJo SINE Alu 127 302 -10 2051 102 32 3 chr10 108393998 108394283 -31922482 - AluSx SINE Alu -19 293 1 1789 166 29 13 chr10 108394379 108394686 -31922079 + AluJo SINE Alu 1 312 0 2267 109 6 3 chr10 108394688 108395000 -31921765 + AluSq SINE Alu 1 313 0 302 212 212 0 chr10 108395008 108395093 -31921672 + MIR SINE MIR 81 183 -79 701 221 124 23 chr10 108395254 108395471 -31921294 - MIR SINE MIR -21 241 3 222 351 13 0 chr10 108395594 108395671 -31921094 - MIR SINE MIR -183 79 2 296 308 30 89 chr10 108396155 108396291 -31920474 - MIR SINE MIR 0 262 144 1277 241 32 66 chr10 108396291 108396378 -31920387 + MLT2C1 LTR ERVL 1 89 -308 2272 83 7 7 chr10 108396378 108396678 -31920087 - AluSx SINE Alu -10 302 3 1277 241 32 66 chr10 108396678 108397001 -31919764 + MLT2C1 LTR ERVL 89 397 0 296 308 30 89 chr10 108397001 108397101 -31919664 - MIR SINE MIR -118 144 40 896 254 104 61 chr10 108397153 108397617 -31919148 + L2 LINE L2 2524 3010 -303 244 316 147 0 chr10 108397648 108397743 -31919022 + L2 LINE L2 3141 3249 -23 934 273 115 62 chr10 108398005 108398495 -31918270 - L2 LINE L2 -85 3228 2766 1810 164 0 22 chr10 108398495 108398806 -31917959 - AluJo SINE Alu -8 304 1 934 273 115 62 chr10 108398806 108399015 -31917750 - L2 LINE L2 -547 2766 2570 2162 119 7 0 chr10 108399015 108399317 -31917448 + AluSq SINE Alu 1 304 -9 934 273 115 62 chr10 108399317 108399416 -31917349 - L2 LINE L2 -743 2570 2365 307 300 182 0 chr10 108399680 108399850 -31916915 + MIR SINE MIR 49 249 -13 769 295 39 31 chr10 108399850 108399955 -31916810 - MIR SINE MIR 0 262 159 2059 144 39 79 chr10 108399955 108400386 -31916379 - MLT2D LTR ERVL 0 414 1 769 295 39 31 chr10 108400386 108400534 -31916231 - MIR SINE MIR -103 159 7 443 257 37 37 chr10 108400712 108400848 -31915917 - MIR3 SINE MIR -33 175 40 555 240 191 22 chr10 108400869 108401052 -31915713 - MIR SINE MIR -2 260 47 209 98 24 0 chr10 108402858 108402899 -31913866 + (CCCG)n Simple_repeat Simple_repeat 1 42 0 261 57 0 0 chr10 108402917 108402952 -31913813 + (CCCCG)n Simple_repeat Simple_repeat 2 36 0 246 384 10 10 chr10 108404003 108404102 -31912663 - MER5B DNA MER1_type -73 105 7 194 229 21 21 chr10 108404143 108404191 -31912574 + MER5A DNA MER1_type 91 138 -51 328 220 147 9 chr10 108404240 108404349 -31912416 - MIR SINE MIR -57 205 82 1355 155 21 13 chr10 108404925 108405164 -31911601 + AluJo SINE Alu 66 306 -6 281 252 244 8 chr10 108405223 108405350 -31911415 - MER5A DNA MER1_type -2 187 31 303 308 19 56 chr10 108405537 108405644 -31911121 - MIR SINE MIR -61 147 45 539 290 42 29 chr10 108406719 108406957 -31909808 + MIR SINE MIR 22 262 0 226 277 31 0 chr10 108407588 108407653 -31909112 - MIR SINE MIR -118 144 78 284 227 13 13 chr10 108408781 108408856 -31907909 + MIR SINE MIR 33 107 -101 418 285 181 0 chr10 108408856 108409049 -31907716 - MER112 DNA MER1_type -2 258 31 201 319 83 0 chr10 108409056 108409128 -31907637 + MIR SINE MIR 118 195 -67 625 254 82 2 chr10 108409809 108410002 -31906763 + MIR SINE MIR 35 237 -25 1062 53 53 10 chr10 108410572 108410930 -31905835 + (TCCA)n Simple_repeat Simple_repeat 1 874 0 1032 46 54 0 chr10 108410930 108411410 -31905355 + (TCCA)n Simple_repeat Simple_repeat 1 506 0 847 43 68 0 chr10 108411596 108411758 -31905007 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 231 36 0 0 chr10 108412218 108412246 -31904519 + (TG)n Simple_repeat Simple_repeat 1 28 0 294 244 126 16 chr10 108412954 108413081 -31903684 - MIR SINE MIR -88 174 34 183 350 34 8 chr10 108413056 108413173 -31903592 + L2 LINE L2 2937 3056 -216 * 934 191 39 34 chr10 108413232 108413436 -31903329 + MER3 DNA MER1_type 5 209 0 213 159 0 0 chr10 108413483 108413527 -31903238 + (TG)n Simple_repeat Simple_repeat 2 45 0 392 259 291 0 chr10 108413529 108413687 -31903078 + MIR SINE MIR 44 247 -15 232 321 37 46 chr10 108413992 108414101 -31902664 - MIR SINE MIR -73 135 28 211 325 58 8 chr10 108414437 108414557 -31902208 + MIR3 SINE MIR 4 129 -79 871 307 8 0 chr10 108415065 108415309 -31901456 - MIR SINE MIR -11 251 6 1724 79 9 9 chr10 108415431 108415660 -31901105 + AluSg/x SINE Alu 83 311 -1 281 266 250 8 chr10 108416154 108416278 -31900487 + L2 LINE L2 3116 3269 -3 231 274 16 16 chr10 108416447 108416509 -31900256 + L2 LINE L2 3010 3071 -201 2146 85 7 7 chr10 108416832 108417127 -31899638 - AluSg SINE Alu -15 295 1 876 138 0 0 chr10 108417156 108417279 -31899486 - FLAM_C SINE Alu -9 124 2 538 250 152 24 chr10 108417287 108417464 -31899301 - MIR SINE MIR -52 210 21 279 243 159 9 chr10 108418261 108418368 -31898397 + LTR16C LTR ERVL 367 489 -2 317 238 224 28 chr10 108418884 108419027 -31897738 + MIR3 SINE MIR 1 171 -37 480 237 75 56 chr10 108419306 108419456 -31897309 + MIR SINE MIR 52 198 -64 2025 116 39 0 chr10 108419456 108419740 -31897025 + AluSx SINE Alu 1 295 -17 1732 140 66 14 chr10 108419745 108420031 -31896734 + AluSx SINE Alu 3 303 -9 480 237 75 56 chr10 108420031 108420089 -31896676 + MIR SINE MIR 201 262 0 248 291 47 12 chr10 108420085 108420171 -31896594 - MIR SINE MIR -64 198 110 * 1532 164 0 4 chr10 108420425 108420688 -31896077 + AluJo SINE Alu 40 301 -11 191 366 11 21 chr10 108420691 108420784 -31895981 - MIR SINE MIR -164 98 7 1503 179 50 20 chr10 108421405 108421707 -31895058 + AluJo SINE Alu 1 311 -1 625 203 14 28 chr10 108421731 108421874 -31894891 + L1MB7 LINE L1 6033 6173 -11 287 262 79 48 chr10 108422054 108422180 -31894585 + LTR50 LTR ERVL 344 473 -322 301 344 118 5 chr10 108422491 108422686 -31894079 + MIR SINE MIR 22 238 -24 191 327 115 10 chr10 108422983 108423087 -31893678 - MIR3 SINE MIR -6 202 88 261 222 83 37 chr10 108423177 108423285 -31893480 + L2 LINE L2 2950 3062 -251 321 297 35 64 chr10 108423365 108423490 -31893275 - MIR SINE MIR -62 146 36 209 380 0 0 chr10 108423641 108423712 -31893053 + MIR SINE MIR 16 86 -122 269 390 130 0 chr10 108424798 108424967 -31891798 - MIR SINE MIR -12 250 60 231 276 17 0 chr10 108425038 108425096 -31891669 + L2 LINE L2 3213 3271 -1 193 225 56 70 chr10 108426323 108426394 -31890371 + MIR SINE MIR 75 145 -63 565 280 122 5 chr10 108426622 108426811 -31889954 - MIR SINE MIR -21 241 31 185 289 66 51 chr10 108427012 108427209 -31889556 - L2 LINE L2 -221 3051 2852 1933 119 3 42 chr10 108427639 108427949 -31888816 - AluJo SINE Alu -14 298 1 340 333 108 11 chr10 108428150 108428336 -31888429 + MIR SINE MIR 43 246 -16 390 42 0 0 chr10 108428393 108428441 -31888324 + (CA)n Simple_repeat Simple_repeat 2 49 0 1639 155 110 21 chr10 108428474 108428809 -31887956 + MLT1A1 LTR MaLR 1 365 0 489 322 47 6 chr10 108428948 108429119 -31887646 + MIR SINE MIR 14 191 -71 622 224 0 40 chr10 108429125 108429277 -31887488 - L2 LINE L2 -2 3311 3166 872 133 20 201 chr10 108429277 108429341 -31887424 - MLT1A1 LTR MaLR -1 364 290 2401 90 3 0 chr10 108429341 108429652 -31887113 - AluSx SINE Alu 0 312 1 872 133 20 201 chr10 108429652 108429881 -31886884 - MLT1A1 LTR MaLR -75 290 124 329 330 178 0 chr10 108430813 108430998 -31885767 - MIR SINE MIR -11 251 34 2168 122 0 3 chr10 108431653 108431956 -31884809 + AluSx SINE Alu 1 302 -10 801 178 7 0 chr10 108432099 108432234 -31884531 - AluJo SINE Alu -176 136 1 237 350 33 33 chr10 108432334 108432454 -31884311 - MIR SINE MIR -142 120 1 345 294 64 0 chr10 108432641 108432750 -31884015 - MER91C DNA MER1_type 0 140 25 275 267 43 112 chr10 108433233 108433394 -31883371 + MIR SINE MIR 23 140 -68 297 260 0 0 chr10 108434118 108434195 -31882570 + (CCAA)n Simple_repeat Simple_repeat 1 77 0 580 203 6 16 chr10 108434231 108434413 -31882352 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 2134 87 3 11 chr10 108435177 108435529 -31881236 + AluSx SINE Alu 1 350 0 232 298 39 39 chr10 108435975 108436079 -31880686 - MIR SINE MIR -77 185 82 504 189 24 47 chr10 108436097 108436224 -31880541 + L2 LINE L2 3189 3312 -1 469 326 26 42 chr10 108436251 108436441 -31880324 + L3 LINE CR1 923 1109 -468 184 195 73 0 chr10 108436609 108436650 -31880115 - L2 LINE L2 -16 3256 3213 235 299 0 46 chr10 108436955 108437042 -31879723 + GA-rich Low_complexity Low_complexity 1 83 0 313 290 197 0 chr10 108437784 108437967 -31878798 + MIR SINE MIR 33 251 -11 551 188 36 51 chr10 108438021 108438159 -31878606 + MIR3 SINE MIR 8 143 -65 412 211 11 0 chr10 108438257 108438347 -31878418 - MER103 DNA DNA -50 116 26 586 265 5 58 chr10 108438378 108438510 -31878255 - MIR SINE MIR -71 191 69 2051 96 0 24 chr10 108438510 108438832 -31877933 - AluSx SINE Alu 0 315 1 586 265 5 58 chr10 108438832 108438887 -31877878 - MIR SINE MIR -193 69 13 198 143 0 0 chr10 108439848 108439883 -31876882 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr10 108439901 108439929 -31876836 + AT_rich Low_complexity Low_complexity 1 28 0 2077 141 0 0 chr10 108440791 108441090 -31875675 - AluJb SINE Alu -11 301 3 291 198 119 40 chr10 108441998 108442099 -31874666 + L1MC5 LINE L1 7806 7914 -47 424 218 105 8 chr10 108442107 108442240 -31874525 + MER53 DNA DNA 1 146 -43 435 187 93 9 chr10 108442309 108442416 -31874349 + MER53 DNA DNA 73 188 -1 319 292 47 76 chr10 108442490 108442661 -31874104 + MER5A DNA MER1_type 1 166 -23 1645 198 3 7 chr10 108442957 108443265 -31873500 - AluJo SINE Alu -5 307 1 257 302 23 0 chr10 108443356 108443442 -31873323 - MER81 DNA DNA 0 114 27 629 275 58 14 chr10 108443862 108444069 -31872696 + LTR16A LTR ERVL 235 450 0 1899 287 93 48 chr10 108444193 108444468 -31872297 + HERV16 LTR ERVL 152 413 -4726 1962 141 0 3 chr10 108444468 108444765 -31872000 + AluJb SINE Alu 1 296 -16 1899 287 93 48 chr10 108444765 108445223 -31871542 + HERV16 LTR ERVL 413 849 -4290 2235 129 43 83 chr10 108445223 108445643 -31871122 + MER57A LTR ERV1 1 403 0 1899 287 93 48 chr10 108445643 108446233 -31870532 + HERV16 LTR ERVL 849 3208 -1931 1822 111 24 0 chr10 108446277 108446529 -31870236 - AluSp SINE Alu -16 297 40 5355 81 1 54 chr10 108446860 108447613 -31869152 - L1PA13 LINE L1 -1 6162 5450 2296 135 16 0 chr10 108447615 108448067 -31868698 + L1PA13 LINE L1 4986 5442 -719 954 187 0 0 chr10 108448092 108448242 -31868523 + FRAM SINE Alu 1 150 -16 249 98 0 0 chr10 108448242 108448283 -31868482 + (CATA)n Simple_repeat Simple_repeat 2 42 0 605 231 65 46 chr10 108448638 108448898 -31867867 - MER97c DNA MER1_type? 0 1090 826 1668 160 0 0 chr10 108449105 108449368 -31867397 + AluJb SINE Alu 25 287 -25 8491 193 50 26 chr10 108449380 108449619 -31867146 - L1MC3 LINE L1 -27 7758 7526 2224 101 0 7 chr10 108449619 108449915 -31866850 - AluY SINE Alu -13 298 5 8491 193 50 26 chr10 108449915 108451612 -31865153 - L1MC3 LINE L1 -259 7526 5775 1112 276 84 41 chr10 108451812 108452250 -31864515 + L1MC4a LINE L1 5344 5813 -1995 2227 98 17 7 chr10 108452250 108452547 -31864218 + AluSq SINE Alu 1 300 -13 1112 276 84 41 chr10 108452547 108452666 -31864099 + L1MC4a LINE L1 5813 5925 -1883 24 32 0 0 chr10 108452849 108452880 -31863885 + AT_rich Low_complexity Low_complexity 1 31 0 2340 89 6 16 chr10 108453100 108453416 -31863349 - AluSp SINE Alu 0 313 1 378 280 57 62 chr10 108453638 108453849 -31862916 + L2 LINE L2 3044 3253 -60 195 241 63 76 chr10 108454503 108454582 -31862183 + L2 LINE L2 3180 3257 -15 2233 111 0 0 chr10 108454596 108454885 -31861880 - AluSx SINE Alu -23 289 1 778 252 86 36 chr10 108455134 108455436 -31861329 + MLT1J1 LTR MaLR 1 317 -129 1101 270 98 43 chr10 108455436 108455966 -31860799 - L1MC3 LINE L1 -743 5403 4935 195 42 0 0 chr10 108455966 108455990 -31860775 + (TG)n Simple_repeat Simple_repeat 1 24 0 1101 270 98 43 chr10 108455990 108456362 -31860403 - L1MC3 LINE L1 -1211 4935 4585 266 254 0 0 chr10 108456426 108456485 -31860280 - L1P LINE L1 -1801 4345 4287 231 214 92 41 chr10 108456593 108456691 -31860074 - L1MC3 LINE L1 -2024 4122 4020 295 279 8 78 chr10 108456717 108456846 -31859919 + MIR SINE MIR 102 221 -41 332 250 12 0 chr10 108456885 108456965 -31859800 + L2 LINE L2 3230 3310 -3 185 300 20 0 chr10 108457199 108457249 -31859516 - MIR SINE MIR -142 120 70 283 314 161 0 chr10 108458112 108458230 -31858535 - L2 LINE L2 0 3272 3136 189 254 0 0 chr10 108458258 108458329 -31858436 + (CA)n Simple_repeat Simple_repeat 2 72 0 251 143 0 36 chr10 108458413 108458469 -31858296 + (CATA)n Simple_repeat Simple_repeat 4 57 0 632 223 37 15 chr10 108458620 108458813 -31857952 + MIR SINE MIR 32 221 -41 1427 145 133 0 chr10 108458825 108459095 -31857670 - AluJo SINE Alu 0 303 1 276 271 83 15 chr10 108459585 108459718 -31857047 + L1ME4a LINE L1 5331 5472 -2336 2192 104 0 29 chr10 108459726 108460033 -31856732 + AluSx SINE Alu 1 298 -14 820 224 0 25 chr10 108460116 108460277 -31856488 - AluJb SINE Alu -25 287 131 322 382 99 14 chr10 108460975 108461187 -31855578 - L2 LINE L2 0 3272 3043 572 241 79 100 chr10 108461538 108461779 -31854986 - MIR SINE MIR -4 258 23 284 233 55 0 chr10 108462235 108462308 -31854457 + MER91A DNA MER1_type 1 77 -119 2288 140 97 20 chr10 108462445 108462846 -31853919 - MSTB1 LTR MaLR 0 432 1 711 291 58 41 chr10 108462863 108463438 -31853327 + L1ME4a LINE L1 5446 6032 -89 2180 128 0 3 chr10 108463461 108463758 -31853007 - AluSx SINE Alu -16 296 1 882 276 25 8 chr10 108463901 108464144 -31852621 - LTR16A LTR ERVL -96 354 108 331 244 24 12 chr10 108465695 108465777 -31850988 + L1ME1 LINE L1 5937 6019 -147 3003 218 38 25 chr10 108465839 108466550 -31850215 - L1ME1 LINE L1 -147 6019 5300 2336 202 58 94 chr10 108466685 108467526 -31849239 - L1ME1 LINE L1 -861 5285 4475 21 0 0 0 chr10 108467748 108467769 -31848996 + AT_rich Low_complexity Low_complexity 1 21 0 315 250 171 29 chr10 108468378 108468518 -31848247 - MER103 DNA DNA -2 164 5 1655 252 84 18 chr10 108468556 108469044 -31847721 - MLT1G1 LTR MaLR 0 595 76 229 262 48 36 chr10 108469146 108469230 -31847535 - L1ME3A LINE L1 -138 6032 5948 826 139 66 7 chr10 108469240 108469377 -31847388 - MER20 DNA MER1_type -36 183 39 439 35 0 0 chr10 108469387 108469444 -31847321 + L1PA3 LINE L1 6099 6155 0 307 250 93 56 chr10 108469484 108469592 -31847173 + L2 LINE L2 3200 3311 -2 203 242 15 15 chr10 108469916 108469982 -31846783 + (CCCG)n Simple_repeat Simple_repeat 4 69 0 459 206 149 0 chr10 108470381 108470522 -31846243 + MIR SINE MIR 84 245 -17 2295 66 30 3 chr10 108470614 108470916 -31845849 - AluY SINE Alu -1 310 1 314 291 120 0 chr10 108471127 108471244 -31845521 + L2 LINE L2 3142 3272 0 261 162 73 0 chr10 108471402 108471470 -31845295 - L1MA10 LINE L1 0 6334 6262 812 43 0 0 chr10 108471492 108471586 -31845179 - L1PA7 LINE L1 -2 6152 6059 228 267 0 0 chr10 108471586 108471646 -31845119 - L1ME2 LINE L1 -50 6114 6055 24 0 0 0 chr10 108471683 108471707 -31845058 + AT_rich Low_complexity Low_complexity 1 24 0 526 210 70 7 chr10 108471872 108472015 -31844750 - L1ME3A LINE L1 -359 5762 5611 1630 161 38 17 chr10 108472093 108472385 -31844380 + AluJo SINE Alu 1 298 -14 389 211 102 16 chr10 108472527 108472655 -31844110 + L1MA10 LINE L1 6194 6332 -2 2204 118 3 0 chr10 108472706 108473012 -31843753 + AluSx SINE Alu 1 307 -5 363 132 0 29 chr10 108473187 108473255 -31843510 + L1MB8 LINE L1 6113 6178 0 327 130 0 0 chr10 108473285 108473339 -31843426 + (TA)n Simple_repeat Simple_repeat 1 54 0 2022 128 3 3 chr10 108473339 108473627 -31843138 - AluSx SINE Alu -24 288 1 732 268 23 54 chr10 108473664 108473990 -31842775 - L1MC4a LINE L1 -302 5819 5557 395 221 13 0 chr10 108473992 108474069 -31842696 + AluJ/FLAM SINE Alu 1 78 -224 1916 227 104 16 chr10 108474482 108474980 -31841785 - MER34 LTR ERV1 0 542 1 888 81 89 0 chr10 108474990 108475114 -31841651 - MER85 DNA T2_type -4 135 1 567 209 101 19 chr10 108475176 108475334 -31841431 + MIR SINE MIR 28 198 -64 508 231 92 116 chr10 108475336 108475587 -31841178 - MIR SINE MIR 0 262 18 215 247 32 65 chr10 108475569 108475662 -31841103 + L2 LINE L2 3173 3262 -10 * 1672 178 47 0 chr10 108475685 108476075 -31840690 + L1MC/D LINE L1 5186 5590 -743 2208 110 7 0 chr10 108476075 108476383 -31840382 - AluSx SINE Alu -2 310 1 185 308 0 19 chr10 108476383 108476435 -31840330 + L3 LINE CR1 1526 1576 -1 257 265 0 12 chr10 108476886 108476969 -31839796 + L1ME4a LINE L1 5098 5179 -967 1441 232 130 41 chr10 108477123 108477351 -31839414 + L1ME4a LINE L1 5277 5483 -679 2585 37 0 0 chr10 108477351 108477646 -31839119 - AluY SINE Alu -15 296 2 1441 232 130 41 chr10 108477646 108478042 -31838723 + L1ME4a LINE L1 5483 5956 -206 187 226 75 0 chr10 108478161 108478214 -31838551 + L3b LINE CR1 1346 1402 -181 2069 94 14 7 chr10 108478471 108478793 -31837972 + AluSx SINE Alu 6 312 0 1278 131 77 22 chr10 108479006 108479228 -31837537 + MER46A DNA MER2_type 2 235 -1 23 33 0 0 chr10 108479454 108479484 -31837281 + AT_rich Low_complexity Low_complexity 1 30 0 373 259 227 16 chr10 108479867 108480052 -31836713 - MIR SINE MIR -27 235 12 282 145 205 0 chr10 108480362 108480445 -31836320 + L1ME4a LINE L1 6021 6120 -1 1966 83 30 70 chr10 108480548 108480850 -31835915 + AluY SINE Alu 1 290 -21 22 0 0 0 chr10 108481957 108481979 -31834786 + AT_rich Low_complexity Low_complexity 1 22 0 189 276 155 17 chr10 108482024 108482082 -31834683 + MIR SINE MIR 9 74 -188 2374 89 7 0 chr10 108483370 108483672 -31833093 + AluSp SINE Alu 1 304 -9 195 336 102 0 chr10 108483674 108483802 -31832963 - L2 LINE L2 -888 2426 2286 2028 85 4 0 chr10 108484090 108484350 -31832415 + AluSq SINE Alu 38 298 -15 256 180 0 0 chr10 108484935 108484985 -31831780 + L1MC1 LINE L1 6268 6317 -16 1738 170 16 22 chr10 108485015 108485327 -31831438 + AluJo SINE Alu 1 310 -2 30 0 0 0 chr10 108485538 108485568 -31831197 + AT_rich Low_complexity Low_complexity 1 30 0 371 308 236 5 chr10 108489470 108489665 -31827100 + MIR SINE MIR 13 252 -10 2250 96 13 25 chr10 108491197 108491511 -31825254 + AluSg SINE Alu 1 310 0 21 0 0 0 chr10 108493716 108493737 -31823028 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 108494118 108494139 -31822626 + AT_rich Low_complexity Low_complexity 1 21 0 235 259 198 49 chr10 108495769 108495931 -31820834 + MIR3 SINE MIR 2 187 -21 188 171 49 0 chr10 108496380 108496421 -31820344 + L2 LINE L2 3271 3313 0 203 280 120 10 chr10 108496505 108496605 -31820160 - L3b LINE CR1 -131 1452 1342 550 56 0 45 chr10 108496968 108497057 -31819708 + L1MA7 LINE L1 6207 6291 0 323 256 185 90 chr10 108497263 108497642 -31819123 + L2 LINE L2 2551 2965 -349 213 320 77 26 chr10 108497885 108497963 -31818802 + L2 LINE L2 3154 3235 -37 500 278 190 19 chr10 108498337 108498553 -31818212 + MIR SINE MIR 3 255 -7 1829 173 0 39 chr10 108498934 108499095 -31817670 - AluJb SINE Alu -17 295 150 2353 90 0 20 chr10 108499095 108499395 -31817370 - AluSg SINE Alu -16 294 1 1829 173 0 39 chr10 108499395 108499540 -31817225 - AluJb SINE Alu -162 150 1 1229 241 128 24 chr10 108500990 108501613 -31815152 + L1ME3 LINE L1 3791 4478 -1668 1874 230 104 40 chr10 108501719 108501827 -31814938 + L1ME3 LINE L1 4457 4557 -1607 2197 110 7 0 chr10 108501827 108502117 -31814648 + AluSx SINE Alu 5 296 -16 1874 230 104 40 chr10 108502117 108502184 -31814581 + L1ME3 LINE L1 4557 4618 -1546 360 0 0 0 chr10 108502184 108502224 -31814541 + (TG)n Simple_repeat Simple_repeat 2 41 0 1874 230 104 40 chr10 108502224 108502740 -31814025 + L1ME3 LINE L1 4618 5100 -1064 737 195 8 0 chr10 108502740 108502863 -31813902 + FLAM_C SINE Alu 1 124 -9 1874 230 104 40 chr10 108502863 108503401 -31813364 + L1ME3 LINE L1 5100 5602 -562 2423 112 123 106 chr10 108503401 108504054 -31812711 + MER4A LTR ERV1 1 664 0 1874 230 104 40 chr10 108504054 108504411 -31812354 + L1ME3 LINE L1 5602 6164 0 1400 149 41 22 chr10 108504528 108504797 -31811968 - L1MC2 LINE L1 -11 6333 6060 230 155 35 0 chr10 108505614 108505672 -31811093 + Alu SINE Alu 243 302 0 287 285 31 15 chr10 108508127 108508257 -31808508 - L2 LINE L2 -925 2389 2258 1901 170 3 13 chr10 108509966 108510277 -31806488 + AluJo SINE Alu 3 310 -2 341 367 148 0 chr10 108510453 108510622 -31806143 + MIR3 SINE MIR 5 198 -10 680 265 152 18 chr10 108511000 108511389 -31805376 - MLT1L LTR MaLR -5 610 170 1465 273 13 6 chr10 108511729 108512206 -31804559 + L1M4 LINE L1 3374 3853 -2293 5809 196 24 33 chr10 108512265 108512297 -31804468 + L1ME1 LINE L1 2 33 -6509 2349 118 0 0 chr10 108512297 108512603 -31804162 - AluSq SINE Alu -7 306 1 5809 196 24 33 chr10 108512603 108513892 -31802873 + L1ME1 LINE L1 33 1311 -5231 262 224 0 0 chr10 108513928 108513995 -31802770 + L1MB3 LINE L1 6091 6157 -26 1557 187 14 7 chr10 108514001 108514284 -31802481 - AluJo SINE Alu -27 285 1 27 0 0 0 chr10 108514284 108514311 -31802454 + AT_rich Low_complexity Low_complexity 1 27 0 3663 204 64 55 chr10 108514393 108515530 -31801235 + L1ME1 LINE L1 4348 5473 -1191 689 208 0 8 chr10 108515530 108515655 -31801110 + FLAM_A SINE Alu 1 124 -9 3663 204 64 55 chr10 108515655 108515790 -31800975 + L1ME1 LINE L1 5473 5605 -1059 2020 122 3 16 chr10 108515790 108516094 -31800671 + AluSg SINE Alu 1 300 -10 3663 204 64 55 chr10 108516094 108517108 -31799657 + L1ME1 LINE L1 5605 6646 -18 2026 148 75 13 chr10 108517863 108518236 -31798529 - MSTD LTR MaLR 0 396 1 207 131 66 66 chr10 108518574 108518635 -31798130 + L2 LINE L2 3163 3223 -90 295 336 75 84 chr10 108519031 108519447 -31797318 + L2 LINE L2 2843 3254 -18 764 181 0 8 chr10 108521029 108521162 -31795603 - FLAM_C SINE Alu -1 132 1 485 309 19 1 chr10 108521438 108521608 -31795157 + MIR SINE MIR 30 206 -56 186 323 37 58 chr10 108521761 108521950 -31794815 + L2 LINE L2 2793 2977 -337 1258 190 5 0 chr10 108522078 108522289 -31794476 - AluJo SINE Alu -37 275 64 24 0 0 0 chr10 108522335 108522359 -31794406 + AT_rich Low_complexity Low_complexity 1 24 0 1962 141 19 73 chr10 108522383 108522795 -31793970 + MLT1B LTR MaLR 1 390 0 471 307 22 7 chr10 108522802 108522939 -31793826 + L2 LINE L2 3134 3272 0 218 269 15 0 chr10 108524891 108524958 -31791807 + CT-rich Low_complexity Low_complexity 1 68 0 456 153 14 0 chr10 108525672 108525744 -31791021 + AluJb SINE Alu 84 156 -156 1395 123 0 38 chr10 108525769 108525980 -31790785 + AluSg/x SINE Alu 106 308 -4 976 158 150 4 chr10 108528284 108528524 -31788241 + ORSL DNA AcHobo 1 275 0 2414 80 0 3 chr10 108530335 108530636 -31786129 - AluSg SINE Alu -10 300 1 270 176 0 0 chr10 108530877 108530928 -31785837 + (CATA)n Simple_repeat Simple_repeat 4 54 0 990 193 42 25 chr10 108531843 108532082 -31784683 - L1MB7 LINE L1 -9 6175 5933 351 0 0 0 chr10 108532543 108532582 -31784183 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 227 100 0 25 chr10 108533392 108533432 -31783333 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 222 174 0 0 chr10 108534136 108534182 -31782583 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 435 323 129 40 chr10 108534185 108534517 -31782248 - L2 LINE L2 -2 3270 2910 364 340 153 34 chr10 108534585 108535299 -31781466 - L2 LINE L2 -527 2787 1989 282 336 17 26 chr10 108537099 108537215 -31779550 - L2 LINE L2 -4 3268 3154 261 83 0 0 chr10 108538305 108538341 -31778424 + (TG)n Simple_repeat Simple_repeat 1 36 0 323 362 71 24 chr10 108538366 108538620 -31778145 - L2 LINE L2 0 3272 3007 2448 343 43 22 chr10 108540383 108541924 -31774841 - HERVI LTR ERV1 -2036 5749 4177 410 367 14 9 chr10 108542030 108542245 -31774520 - HERVI LTR ERV1 -3583 3066 2851 189 147 0 0 chr10 108542289 108542323 -31774442 + (TC)n Simple_repeat Simple_repeat 2 35 0 235 326 0 21 chr10 108542382 108542477 -31774288 + CT-rich Low_complexity Low_complexity 2 94 0 253 186 0 0 chr10 108542486 108542529 -31774236 - LTR18B LTR ERVL -349 265 223 * 1288 139 43 13 chr10 108542525 108542755 -31774010 - LTR18B LTR ERVL -129 485 249 970 349 21 21 chr10 108542808 108543505 -31773260 - HERVI LTR ERV1 -5799 1986 1290 636 328 0 0 chr10 108543741 108543936 -31772829 - HERVI LTR ERV1 -6815 970 776 416 276 60 8 chr10 108544674 108544808 -31771957 - L2 LINE L2 -4 3309 3169 288 298 36 0 chr10 108545532 108545616 -31771149 + MER81 DNA DNA 11 97 -17 276 311 84 17 chr10 108546074 108546193 -31770572 + MIR SINE MIR 20 146 -62 195 100 0 0 chr10 108547417 108547447 -31769318 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 447 242 92 8 chr10 108547587 108547707 -31769058 + MER119 DNA MER1_type 4 133 -450 345 244 8 61 chr10 108547711 108547842 -31768923 + MER119 DNA MER1_type 457 580 -3 662 335 40 23 chr10 108549341 108549645 -31767120 - L2 LINE L2 0 3313 3005 276 258 31 21 chr10 108549900 108549997 -31766768 + CT-rich Low_complexity Low_complexity 1 98 0 493 171 8 0 chr10 108550718 108550823 -31765942 + MER5A DNA MER1_type 4 109 -80 186 240 250 10 chr10 108550749 108550849 -31765916 - MER5A DNA MER1_type -23 166 43 * 2466 90 0 6 chr10 108551318 108551630 -31765135 - AluSg SINE Alu 0 310 1 484 32 0 0 chr10 108551981 108552044 -31764721 - MER41B LTR ERV1 -91 544 482 280 289 172 0 chr10 108552785 108552913 -31763852 - MIR SINE MIR -56 206 57 210 192 0 0 chr10 108553130 108553182 -31763583 + (TGG)n Simple_repeat Simple_repeat 3 54 0 322 304 81 0 chr10 108553401 108553549 -31763216 - MIR3 SINE MIR -19 189 30 2462 90 0 0 chr10 108553670 108553981 -31762784 - AluY SINE Alu 0 311 1 252 310 43 43 chr10 108554617 108554733 -31762032 - MIR SINE MIR -70 192 77 342 0 0 0 chr10 108554799 108554837 -31761928 + (TG)n Simple_repeat Simple_repeat 1 38 0 843 117 67 22 chr10 108555900 108556079 -31760686 - MER53 DNA DNA -2 187 1 987 281 99 15 chr10 108556403 108557064 -31759701 - L2 LINE L2 -1 3312 2602 224 259 0 0 chr10 108557357 108557415 -31759350 - L2 LINE L2 -18 3254 3197 195 167 28 0 chr10 108557839 108557875 -31758890 - L2 LINE L2 -11 3302 3266 229 271 0 0 chr10 108559274 108559322 -31757443 + (TG)n Simple_repeat Simple_repeat 2 49 0 193 194 145 16 chr10 108559760 108559822 -31756943 - MIR3 SINE MIR -34 174 105 807 175 81 12 chr10 108561292 108561452 -31755313 + FRAM SINE Alu 1 169 -7 191 185 0 19 chr10 108562580 108562634 -31754131 + (TG)n Simple_repeat Simple_repeat 1 53 0 266 330 0 9 chr10 108565848 108565957 -31750808 - MER103 DNA DNA -43 123 16 439 250 9 17 chr10 108566998 108567114 -31749651 - MIR SINE MIR -123 139 25 24 0 0 0 chr10 108567456 108567480 -31749285 + AT_rich Low_complexity Low_complexity 1 24 0 647 290 34 0 chr10 108568281 108568488 -31748277 - MIR SINE MIR -21 241 28 963 121 0 0 chr10 108569614 108569763 -31747002 + (TCCA)n Simple_repeat Simple_repeat 1 149 0 208 259 37 0 chr10 108569766 108569820 -31746945 - L2 LINE L2 -8 3305 3250 335 125 0 16 chr10 108570451 108570515 -31746250 + (TG)n Simple_repeat Simple_repeat 1 63 0 199 69 0 0 chr10 108571105 108571134 -31745631 - L2 LINE L2 -217 3055 3027 519 45 0 0 chr10 108572000 108572066 -31744699 + (TG)n Simple_repeat Simple_repeat 2 67 0 570 220 0 0 chr10 108574039 108574297 -31742468 + (CA)n Simple_repeat Simple_repeat 1 258 0 351 247 0 0 chr10 108574329 108574503 -31742262 + (CA)n Simple_repeat Simple_repeat 1 174 0 2048 116 40 7 chr10 108579741 108580042 -31736723 + AluSq SINE Alu 1 311 -2 23 0 0 0 chr10 108581705 108581728 -31735037 + AT_rich Low_complexity Low_complexity 1 23 0 188 111 28 0 chr10 108582884 108582920 -31733845 + (TA)n Simple_repeat Simple_repeat 1 37 0 21 36 0 0 chr10 108583507 108583535 -31733230 + AT_rich Low_complexity Low_complexity 1 28 0 212 0 36 0 chr10 108584407 108584435 -31732330 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 191 248 78 135 chr10 108584845 108584986 -31731779 + MIR SINE MIR 18 150 -112 953 210 62 33 chr10 108585250 108585522 -31731243 + MLT1A1 LTR MaLR 4 283 -82 436 285 109 52 chr10 108586380 108586647 -31730118 - L2 LINE L2 -7 3306 3025 344 314 118 7 chr10 108586783 108586936 -31729829 - MIR SINE MIR -86 176 7 2116 124 0 0 chr10 108587374 108587672 -31729093 + AluSx SINE Alu 1 298 -14 188 65 0 32 chr10 108588034 108588065 -31728700 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 275 303 35 127 chr10 108588139 108588479 -31728286 + L2 LINE L2 2933 3241 -31 1582 149 53 46 chr10 108590710 108591012 -31725753 + AluJo SINE Alu 1 304 -8 2100 135 0 0 chr10 108592503 108592799 -31723966 + AluSx SINE Alu 2 297 -15 246 125 0 0 chr10 108593091 108593131 -31723634 - L2 LINE L2 -4 3309 3270 2387 73 0 3 chr10 108593945 108594245 -31722520 - AluY SINE Alu -12 299 1 272 258 167 8 chr10 108594349 108594469 -31722296 + L3 LINE CR1 739 877 -700 234 289 79 44 chr10 108594600 108594714 -31722051 - L2 LINE L2 -8 3305 3188 580 308 142 32 chr10 108594738 108595147 -31721618 + L3 LINE CR1 1054 1507 -70 431 278 92 8 chr10 108596230 108596401 -31720364 + MIR3 SINE MIR 9 190 -65 317 211 70 0 chr10 108596744 108596815 -31719950 + MIR3 SINE MIR 85 160 -48 928 262 25 13 chr10 108597583 108597820 -31718945 + MIR SINE MIR 2 241 -21 21 57 0 0 chr10 108597937 108597972 -31718793 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr10 108598058 108598084 -31718681 + AT_rich Low_complexity Low_complexity 1 26 0 2340 77 0 3 chr10 108598422 108598722 -31718043 + AluSc SINE Alu 1 299 -10 339 257 18 71 chr10 108601690 108601803 -31714962 + MIR SINE MIR 85 191 -71 1644 164 59 3 chr10 108602307 108602475 -31714290 - AluJo SINE Alu -7 305 113 288 53 0 0 chr10 108602475 108602513 -31714252 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1644 164 59 3 chr10 108602513 108602631 -31714134 - AluJo SINE Alu -199 113 3 2033 147 0 6 chr10 108602645 108602958 -31713807 - AluSx SINE Alu -1 311 1 28 0 0 0 chr10 108603114 108603142 -31713623 + AT_rich Low_complexity Low_complexity 1 28 0 218 333 31 70 chr10 108605124 108605253 -31711512 - MER5A DNA MER1_type -48 141 18 249 316 0 51 chr10 108606129 108606227 -31710538 + MER5A DNA MER1_type 2 94 -95 1978 108 43 0 chr10 108608266 108608544 -31708221 + AluSx SINE Alu 1 290 -22 211 271 0 0 chr10 108608716 108608775 -31707990 + CT-rich Low_complexity Low_complexity 1 59 0 21 36 0 0 chr10 108609140 108609168 -31707597 + AT_rich Low_complexity Low_complexity 1 28 0 2353 109 0 3 chr10 108609195 108609506 -31707259 - AluSx SINE Alu -2 310 1 225 209 0 0 chr10 108612074 108612117 -31704648 + MIR SINE MIR 220 262 0 4019 166 15 4 chr10 108612650 108613381 -31703384 + L1MB3 LINE L1 5443 6181 -2 439 325 97 22 chr10 108613395 108613587 -31703178 + HAL1b LINE L1 89 265 -1083 2463 58 10 0 chr10 108613587 108613895 -31702870 + AluY SINE Alu 1 311 0 439 325 97 22 chr10 108613895 108614158 -31702607 + HAL1b LINE L1 265 578 -770 1168 203 142 107 chr10 108614304 108614558 -31702207 + L1MC5 LINE L1 6476 6720 -1241 2116 133 7 0 chr10 108614558 108614866 -31701899 + AluSx SINE Alu 3 312 0 1168 203 142 107 chr10 108614866 108615514 -31701251 + L1MC5 LINE L1 6720 7443 -518 1006 184 14 19 chr10 108615538 108615745 -31701020 - MER106A DNA MER1_type -18 218 13 317 266 79 54 chr10 108615912 108616115 -31700650 + L1ME3A LINE L1 5962 6169 -1 1432 183 7 22 chr10 108616117 108616391 -31700374 + AluJo SINE Alu 35 304 -8 27 49 0 0 chr10 108618471 108618512 -31698253 + AT_rich Low_complexity Low_complexity 1 41 0 331 237 148 9 chr10 108618629 108618775 -31697990 - MIR3 SINE MIR -63 145 6 23 54 0 0 chr10 108619104 108619141 -31697624 + AT_rich Low_complexity Low_complexity 1 37 0 29 70 0 0 chr10 108619655 108619712 -31697053 + AT_rich Low_complexity Low_complexity 1 57 0 415 106 30 0 chr10 108619741 108619807 -31696958 + L1M4 LINE L1 5186 5253 -893 5435 152 47 21 chr10 108619808 108620514 -31696251 - L1MC1 LINE L1 -28 6305 5560 2575 59 0 0 chr10 108620514 108620821 -31695944 + AluY SINE Alu 1 307 -4 5435 152 47 21 chr10 108620821 108621207 -31695558 - L1MC1 LINE L1 -773 5560 5186 214 273 34 45 chr10 108621235 108621323 -31695442 - L2 LINE L2 -13 3259 3173 * 538 231 92 116 chr10 108621305 108621556 -31695209 + MIR SINE MIR 18 262 0 579 215 98 18 chr10 108621558 108621721 -31695044 - MIR SINE MIR -64 198 23 820 81 89 0 chr10 108621778 108621902 -31694863 + MER85 DNA T2_type 1 135 -4 1693 235 102 14 chr10 108621912 108622410 -31694355 + MER34 LTR ERV1 1 542 0 456 280 42 26 chr10 108622724 108622917 -31693848 + L1ME LINE L1 5628 5823 -298 2277 108 3 0 chr10 108623306 108623613 -31693152 + AluSg SINE Alu 1 308 -2 3343 141 2 35 chr10 108623648 108624193 -31692572 + MER1A DNA MER1_type 1 527 0 23 0 0 0 chr10 108624559 108624582 -31692183 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 108624654 108624674 -31692091 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1930 117 73 3 chr10 108624992 108625309 -31691456 - MER44D DNA MER2_type 0 609 1 603 284 65 55 chr10 108625371 108625568 -31691197 - L2 LINE L2 0 3313 3111 1799 156 3 3 chr10 108625568 108625863 -31690902 + AluSx SINE Alu 1 295 -17 603 284 65 55 chr10 108625863 108625957 -31690808 - L2 LINE L2 -202 3111 3019 273 201 157 113 chr10 108626109 108626154 -31690611 - MIR SINE MIR -38 224 182 2090 205 186 32 chr10 108626154 108626843 -31689922 - LTR50 LTR ERVL 0 795 1 273 201 157 113 chr10 108626843 108626956 -31689809 - MIR SINE MIR -80 182 59 539 198 0 0 chr10 108627122 108627213 -31689552 + MER82 DNA MER2_type 2 92 -561 353 333 42 16 chr10 108627244 108627436 -31689329 - MIR SINE MIR -64 198 2 985 244 19 5 chr10 108627470 108627675 -31689090 + MER82 DNA MER2_type 446 653 0 4149 193 39 12 chr10 108628176 108629068 -31687697 + L1MB3 LINE L1 4369 5236 -947 216 0 0 0 chr10 108629068 108629092 -31687673 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4149 193 39 12 chr10 108629092 108629934 -31686831 + L1MB3 LINE L1 5236 6151 -32 240 137 98 0 chr10 108629945 108629996 -31686769 + L1MB3 LINE L1 6127 6182 -1 1292 257 64 15 chr10 108630153 108630670 -31686095 + L1ME1 LINE L1 4876 5417 -743 2011 117 0 3 chr10 108630965 108631255 -31685510 + AluSx SINE Alu 1 289 -23 26 0 0 0 chr10 108631255 108631281 -31685484 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr10 108632109 108632130 -31684635 + AT_rich Low_complexity Low_complexity 1 21 0 192 152 0 0 chr10 108632277 108632310 -31684455 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 325 336 54 7 chr10 108632493 108632642 -31684123 + L1 LINE L1 4319 4474 -1672 1598 179 14 14 chr10 108632668 108632953 -31683812 - AluJo SINE Alu -27 285 1 22 35 0 0 chr10 108633032 108633061 -31683704 + AT_rich Low_complexity Low_complexity 1 29 0 806 148 216 17 chr10 108633214 108633390 -31683375 + MER20 DNA MER1_type 9 219 0 924 260 38 28 chr10 108633390 108633678 -31683087 + L1ME1 LINE L1 5867 6157 -9 1054 202 161 50 chr10 108633699 108634041 -31682724 + L1ME LINE L1 5323 5702 -460 21 0 0 0 chr10 108634057 108634078 -31682687 + AT_rich Low_complexity Low_complexity 1 21 0 897 143 0 0 chr10 108634078 108634204 -31682561 + AluJb SINE Alu 1 126 -186 3192 88 12 34 chr10 108634714 108635030 -31681735 + L1PA16 LINE L1 5671 5974 -192 1893 158 0 3 chr10 108635030 108635341 -31681424 + AluJb SINE Alu 1 310 -2 3192 88 12 34 chr10 108635341 108635522 -31681243 + L1PA16 LINE L1 5974 6157 -9 199 105 105 0 chr10 108635928 108635966 -31680799 + L2 LINE L2 3263 3304 -9 2101 120 3 10 chr10 108636645 108636946 -31679819 + AluSq SINE Alu 1 299 -14 218 243 68 54 chr10 108637284 108637358 -31679407 - L2 LINE L2 -208 3064 2990 205 217 33 33 chr10 108637827 108637887 -31678878 + L2 LINE L2 3254 3313 0 215 360 35 0 chr10 108638345 108638431 -31678334 + L2 LINE L2 1415 1503 -1811 1848 184 0 0 chr10 108638433 108638742 -31678023 + AluJo SINE Alu 2 310 -2 724 266 28 3 chr10 108638757 108639076 -31677689 + L1M4 LINE L1 3191 3517 -2629 270 136 0 0 chr10 108639178 108639222 -31677543 + (A)n Simple_repeat Simple_repeat 1 44 0 2131 89 14 0 chr10 108639268 108639585 -31677180 - AluSx SINE Alu 0 321 1 4049 149 62 46 chr10 108639613 108640444 -31676321 + L1MB5 LINE L1 5199 6049 -125 1936 141 30 7 chr10 108640444 108640748 -31676017 + AluJb SINE Alu 1 311 -1 4049 149 62 46 chr10 108640748 108640868 -31675897 + L1MB5 LINE L1 6049 6166 -8 366 170 106 0 chr10 108640880 108640974 -31675791 + L1MCb LINE L1 978 1081 -4964 * 2552 160 47 22 chr10 108640970 108641310 -31675455 + L1MC3 LINE L1 7161 7522 -263 2249 101 3 7 chr10 108641310 108641616 -31675149 + AluSp SINE Alu 1 305 -8 2552 160 47 22 chr10 108641616 108641856 -31674909 + L1MC3 LINE L1 7522 7755 -30 1343 265 64 39 chr10 108641858 108641946 -31674819 + L1MCb LINE L1 1099 1183 -5562 282 56 0 0 chr10 108641946 108641982 -31674783 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1343 265 64 39 chr10 108641982 108642868 -31673897 + L1MCb LINE L1 1183 2288 -4457 570 193 37 6 chr10 108642887 108643048 -31673717 + L1MCb LINE L1 3259 3424 -3140 182 245 0 20 chr10 108643227 108643276 -31673489 - MER5B DNA MER1_type -20 158 111 * 350 224 66 13 chr10 108643270 108643346 -31673419 + MER5B DNA MER1_type 99 178 0 1563 204 0 36 chr10 108643441 108643750 -31673015 + AluJb SINE Alu 1 298 -14 2038 124 3 0 chr10 108644248 108644553 -31672212 + AluSx SINE Alu 1 306 0 1337 153 40 55 chr10 108645818 108646145 -31670620 - MER33 DNA MER1_type 0 324 3 301 195 27 64 chr10 108646862 108646955 -31669810 - AluJ/FLAM SINE Alu -234 68 1 337 339 36 24 chr10 108647034 108647202 -31669563 - MIR SINE MIR -80 182 13 2246 99 0 3 chr10 108647289 108647583 -31669182 + AluSc SINE Alu 2 294 -15 416 170 129 61 chr10 108647860 108648007 -31668758 - MER103 DNA DNA -7 159 3 192 158 0 0 chr10 108648779 108648817 -31667948 + (CTATT)n Simple_repeat Simple_repeat 2 39 0 442 157 20 29 chr10 108648831 108648933 -31667832 + MER112 DNA MER1_type 150 250 -10 1717 225 14 2 chr10 108649584 108650039 -31666726 + MER89 LTR ERV1 1 559 0 213 306 47 0 chr10 108650039 108650124 -31666641 + MIR SINE MIR 52 140 -122 357 332 70 23 chr10 108651105 108651319 -31665446 - L1ME3A LINE L1 -9 6161 5938 2290 164 43 0 chr10 108651344 108651758 -31665007 + MSTB1 LTR MaLR 1 432 0 673 120 46 0 chr10 108651820 108651928 -31664837 + L1PA13 LINE L1 6050 6162 -1 1635 237 49 63 chr10 108651928 108652652 -31664113 - L1MC5 LINE L1 -442 7519 6804 1891 142 50 67 chr10 108652677 108653156 -31663609 - L1MB8 LINE L1 -5 6173 5703 623 292 113 4 chr10 108653216 108653490 -31663275 + LTR33 LTR ERVL 209 512 -9 554 216 124 88 chr10 108653500 108653654 -31663111 - HAL1 LINE L1 -696 1811 1641 6118 88 40 0 chr10 108653654 108654799 -31661966 - L1PA13 LINE L1 -4 6159 5009 554 216 124 88 chr10 108654799 108654927 -31661838 - HAL1 LINE L1 -866 1641 1519 565 322 149 27 chr10 108655016 108655490 -31661275 - L2 LINE L2 -5 3267 2741 23 0 0 0 chr10 108656204 108656227 -31660538 + AT_rich Low_complexity Low_complexity 1 23 0 1502 98 0 0 chr10 108656256 108656480 -31660285 + L1MA1 LINE L1 6079 6302 0 629 149 10 131 chr10 108656558 108656682 -31660083 - L1MD3 LINE L1 -5 8037 7954 257 0 30 0 chr10 108656682 108656715 -31660050 + (TC)n Simple_repeat Simple_repeat 1 34 0 629 149 10 131 chr10 108656715 108656796 -31659969 - L1MD3 LINE L1 -88 7954 7865 1858 162 30 11 chr10 108656799 108657170 -31659595 - L1MC4 LINE L1 -486 7556 7179 327 302 41 35 chr10 108657653 108657822 -31658943 + L2 LINE L2 2883 3052 -220 482 218 60 94 chr10 108657827 108658093 -31658672 - LTR16A1 LTR ERVL 0 457 201 566 271 60 80 chr10 108658495 108658831 -31657934 - L2 LINE L2 -166 3147 2819 319 265 53 61 chr10 108659152 108659284 -31657481 + L1MC4a LINE L1 6221 6351 -1457 21 0 0 0 chr10 108659636 108659657 -31657108 + AT_rich Low_complexity Low_complexity 1 21 0 458 259 29 29 chr10 108660464 108660634 -31656131 + L1MC4a LINE L1 6398 6567 -1241 432 0 0 0 chr10 108660657 108660705 -31656060 + (TG)n Simple_repeat Simple_repeat 1 48 0 252 0 0 0 chr10 108660704 108660732 -31656033 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 2477 241 141 18 chr10 108660742 108661773 -31654992 + L1MC4 LINE L1 6744 7901 -141 405 222 74 30 chr10 108661946 108662081 -31654684 + L1MC5 LINE L1 7773 7913 -48 357 246 109 0 chr10 108662108 108662218 -31654547 - L2 LINE L2 -1495 1819 1698 231 260 0 0 chr10 108662226 108662299 -31654466 - L1MC4 LINE L1 0 8042 7970 953 256 58 46 chr10 108662309 108662704 -31654061 - L2 LINE L2 -1611 1703 1304 276 324 196 7 chr10 108662712 108662860 -31653905 + MER5A DNA MER1_type 9 184 -5 * 682 250 123 13 chr10 108662849 108663077 -31653688 - L2 LINE L2 -2012 1302 1050 798 160 6 65 chr10 108664562 108664731 -31652034 - FRAM SINE Alu -17 159 1 803 260 13 39 chr10 108666027 108666258 -31650507 + MIR SINE MIR 3 227 -35 2347 74 0 10 chr10 108667325 108667624 -31649141 - AluY SINE Alu -15 296 1 200 325 0 26 chr10 108667641 108667718 -31649047 + L2 LINE L2 2681 2755 -559 312 167 15 0 chr10 108667802 108667868 -31648897 + L1MC5 LINE L1 7832 7898 -63 2125 111 0 36 chr10 108668992 108669298 -31647467 - AluSc SINE Alu -14 295 1 596 199 113 0 chr10 108670940 108671091 -31645674 + MER20 DNA MER1_type 25 192 -27 22 56 0 0 chr10 108672423 108672459 -31644306 + AT_rich Low_complexity Low_complexity 1 36 0 254 269 125 44 chr10 108673484 108673671 -31643094 + MIR SINE MIR 13 224 -38 897 293 150 7 chr10 108673705 108674202 -31642563 + L2 LINE L2 2748 3312 -1 708 278 79 22 chr10 108674239 108674516 -31642249 - L3 LINE CR1 -804 773 481 1137 298 157 26 chr10 108674518 108675179 -31641586 + L3 LINE CR1 826 1573 -4 663 241 31 0 chr10 108675696 108675887 -31640878 + L1MC5 LINE L1 7632 7828 -133 434 285 84 36 chr10 108676926 108677129 -31639636 + L1ME LINE L1 4144 4369 -1777 2497 118 14 14 chr10 108677129 108677493 -31639272 - THE1B LTR MaLR 0 364 1 434 285 84 36 chr10 108677493 108677598 -31639167 + L1ME LINE L1 4369 4467 -1679 32 92 0 8 chr10 108677616 108677694 -31639071 + AT_rich Low_complexity Low_complexity 1 79 -40 2258 63 0 36 chr10 108677694 108678026 -31638739 + AluY SINE Alu 1 311 0 32 92 0 8 chr10 108678026 108678067 -31638698 + AT_rich Low_complexity Low_complexity 79 119 0 1714 169 39 3 chr10 108678069 108678353 -31638412 + AluJo SINE Alu 1 294 -18 428 139 28 0 chr10 108678378 108678450 -31638315 - Tigger5 DNA MER2_type 0 2323 2250 1420 211 13 51 chr10 108678451 108678763 -31638002 - Tigger5 DNA MER2_type -2023 300 1 329 298 58 10 chr10 108678859 108679067 -31637698 + L1ME LINE L1 4562 4779 -1367 375 326 14 7 chr10 108679128 108679275 -31637490 + L1ME LINE L1 4859 5006 -1140 25 0 0 0 chr10 108679391 108679416 -31637349 + AT_rich Low_complexity Low_complexity 1 25 0 480 183 0 0 chr10 108679610 108679692 -31637073 + MLT1J1 LTR MaLR 239 320 -126 21 57 0 0 chr10 108679801 108679836 -31636929 + AT_rich Low_complexity Low_complexity 1 35 0 413 281 6 0 chr10 108679836 108680000 -31636765 + L1ME LINE L1 5270 5434 -728 228 283 43 0 chr10 108679998 108680090 -31636675 + HAL1 LINE L1 1282 1377 -1130 * 509 284 96 79 chr10 108680095 108680563 -31636202 - LTR33 LTR ERVL -10 511 36 871 219 152 4 chr10 108680600 108680869 -31635896 + HAL1 LINE L1 1384 1692 -815 561 275 193 28 chr10 108680999 108681392 -31635373 + HAL1 LINE L1 1688 2145 -362 471 279 50 80 chr10 108681415 108681716 -31635049 + HAL1 LINE L1 2212 2503 -4 237 33 0 0 chr10 108682068 108682098 -31634667 + (GA)n Simple_repeat Simple_repeat 2 31 0 598 256 55 88 chr10 108683088 108683358 -31633407 + L2 LINE L2 1474 1733 -1581 2329 92 0 13 chr10 108683358 108683661 -31633104 - AluY SINE Alu -9 302 4 598 256 55 88 chr10 108683661 108683718 -31633047 + L2 LINE L2 1733 1790 -1524 1984 285 107 39 chr10 108683720 108684934 -31631831 + L2 LINE L2 2024 3313 0 1121 158 0 27 chr10 108685611 108685794 -31630971 - FRAM SINE Alu -1 175 1 611 228 44 0 chr10 108686077 108686213 -31630552 - MER5A DNA MER1_type -10 179 38 2812 16 0 0 chr10 108686299 108686603 -31630162 - AluYb8 SINE Alu -14 304 1 825 211 91 34 chr10 108687002 108687210 -31629555 + LTR8 LTR ERV1 1 220 -471 2617 198 68 11 chr10 108687364 108687890 -31628875 + MER74A LTR ERVL 3 558 0 200 232 49 12 chr10 108688298 108688380 -31628385 - MIR SINE MIR -109 153 69 240 289 53 18 chr10 108688611 108688725 -31628040 - L1MC4a LINE L1 -1612 6196 6079 215 338 26 0 chr10 108689376 108689453 -31627312 + L2 LINE L2 2896 2974 -339 227 357 16 48 chr10 108689529 108689655 -31627110 + L2 LINE L2 2987 3108 -164 22 35 0 0 chr10 108690446 108690475 -31626290 + AT_rich Low_complexity Low_complexity 1 29 0 1531 165 12 78 chr10 108692636 108692774 -31623991 + AluJo SINE Alu 1 146 -166 210 37 0 0 chr10 108692774 108692801 -31623964 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1976 68 115 11 chr10 108692801 108693080 -31623685 + AluSc SINE Alu 1 308 -1 1531 165 12 78 chr10 108693080 108693262 -31623503 + AluJo SINE Alu 144 301 -11 273 304 65 0 chr10 108693565 108693657 -31623108 + L2 LINE L2 2404 2501 -813 861 252 58 21 chr10 108693721 108693963 -31622802 + MIR SINE MIR 9 259 -3 376 371 28 9 chr10 108693976 108694189 -31622576 + L2 LINE L2 2590 2806 -508 22 0 0 0 chr10 108694778 108694800 -31621965 + AT_rich Low_complexity Low_complexity 1 22 0 215 159 23 0 chr10 108694873 108694917 -31621848 - L2 LINE L2 -4 3309 3265 340 264 18 27 chr10 108695826 108695936 -31620829 + MIR SINE MIR 82 190 -72 22 0 0 0 chr10 108695998 108696020 -31620745 + AT_rich Low_complexity Low_complexity 1 22 0 562 263 94 5 chr10 108696083 108696296 -31620469 + L1MC4a LINE L1 5704 5935 -1873 710 247 0 7 chr10 108696300 108696446 -31620319 + MIR SINE MIR 29 173 -89 552 210 109 0 chr10 108697330 108697449 -31619316 - FLAM_A SINE Alu -1 132 1 247 269 172 28 chr10 108697678 108697823 -31618942 - MIR3 SINE MIR -5 203 38 23 0 0 0 chr10 108698593 108698616 -31618149 + AT_rich Low_complexity Low_complexity 1 23 0 324 249 26 88 chr10 108699058 108699251 -31617514 + MLT1K LTR MaLR 381 561 -27 328 287 47 33 chr10 108699378 108699528 -31617237 + MLT1I LTR MaLR 196 347 -62 1056 110 82 22 chr10 108700187 108700369 -31616396 - L1MC2 LINE L1 0 6344 6152 232 307 53 53 chr10 108701005 108701119 -31615646 - L2 LINE L2 -9 3263 3150 192 77 0 0 chr10 108701158 108701184 -31615581 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 25 0 0 0 chr10 108701185 108701210 -31615555 + AT_rich Low_complexity Low_complexity 1 25 0 2146 108 7 0 chr10 108701210 108701496 -31615269 - AluSq SINE Alu -25 288 1 29 28 0 0 chr10 108701540 108701576 -31615189 + AT_rich Low_complexity Low_complexity 1 36 0 2074 114 0 0 chr10 108701586 108701866 -31614899 - AluSx SINE Alu -32 280 1 239 224 30 0 chr10 108701908 108701975 -31614790 - L1ME4a LINE L1 -1 6120 6052 1657 245 41 38 chr10 108702335 108702622 -31614143 - L2 LINE L2 -1 3312 3027 5690 58 3 3 chr10 108702622 108703289 -31613476 + PABL_B LTR ERV1 1 667 0 1657 245 41 38 chr10 108703289 108703316 -31613449 - L2 LINE L2 -286 3027 3002 2260 112 0 3 chr10 108703316 108703612 -31613153 + AluSx SINE Alu 14 308 -4 1657 245 41 38 chr10 108703612 108703948 -31612817 - L2 LINE L2 -311 3002 2664 1279 283 83 35 chr10 108703949 108704887 -31611878 - L1MEc LINE L1 -3568 2647 1503 1161 223 23 5 chr10 108704887 108705107 -31611658 - MER58A DNA MER1_type 0 224 1 1279 283 83 35 chr10 108705107 108705669 -31611096 - L1MEc LINE L1 -4712 1503 970 21 0 0 0 chr10 108705734 108705755 -31611010 + AT_rich Low_complexity Low_complexity 1 21 0 1063 299 98 29 chr10 108705967 108706485 -31610280 + MLT1K LTR MaLR 33 586 -2 2507 58 3 3 chr10 108707848 108708157 -31608608 + AluY SINE Alu 1 309 -2 680 276 106 9 chr10 108708225 108708442 -31608323 + MIR SINE MIR 23 260 -2 2095 138 3 0 chr10 108709808 108710106 -31606659 + AluSx SINE Alu 1 299 -13 458 272 146 19 chr10 108710254 108710460 -31606305 + MIR SINE MIR 5 236 -26 330 155 0 0 chr10 108712338 108712396 -31604369 + L1PB4 LINE L1 6098 6155 -1 790 177 0 0 chr10 108712763 108712887 -31603878 + MER2 DNA MER2_type 12 135 -210 28 0 0 0 chr10 108712890 108712918 -31603847 + AT_rich Low_complexity Low_complexity 1 28 0 1360 159 4 9 chr10 108712918 108713144 -31603621 + MER2 DNA MER2_type 120 344 -1 198 71 0 0 chr10 108713273 108713301 -31603464 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 1138 110 13 0 chr10 108713301 108713455 -31603310 - AluSg/x SINE Alu -28 284 129 619 291 54 96 chr10 108713517 108713700 -31603065 + L2 LINE L2 2776 2965 -348 2265 59 0 4 chr10 108713700 108713971 -31602794 - AluY SINE Alu -5 306 37 619 291 54 96 chr10 108713971 108714324 -31602441 + L2 LINE L2 2965 3300 -13 198 0 0 0 chr10 108714324 108714346 -31602419 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 195 309 203 30 chr10 108714366 108714770 -31601995 + L2 LINE L2 1989 2462 -852 686 260 140 23 chr10 108715313 108715578 -31601187 - MER102a DNA MER1_type 0 330 35 2238 97 0 3 chr10 108716464 108716754 -31600011 - AluSc SINE Alu -20 289 1 23 0 0 0 chr10 108716927 108716950 -31599815 + AT_rich Low_complexity Low_complexity 1 23 0 236 238 0 0 chr10 108717044 108717086 -31599679 + (TG)n Simple_repeat Simple_repeat 2 43 0 2335 75 4 0 chr10 108717776 108718099 -31598666 + AluSg SINE Alu 2 325 0 1071 324 97 32 chr10 108718293 108719292 -31597473 + L2 LINE L2 976 2039 -1275 240 333 9 29 chr10 108719464 108719569 -31597196 + LTR16C LTR ERVL 147 249 -242 596 248 45 40 chr10 108720023 108720221 -31596544 + MLT1J LTR MaLR 1 199 -312 332 105 35 0 chr10 108720228 108720285 -31596480 + CT-rich Low_complexity Low_complexity 2 60 0 2643 55 0 0 chr10 108720986 108721295 -31595470 + AluY SINE Alu 1 309 -2 346 259 0 65 chr10 108721419 108721527 -31595238 - MER5B DNA MER1_type -73 105 5 759 293 54 97 chr10 108721935 108722501 -31594264 + L2 LINE L2 2265 2854 -418 445 289 23 8 chr10 108722501 108722629 -31594136 - MER94 DNA DNA -1 133 4 759 293 54 97 chr10 108722629 108722836 -31593929 + L2 LINE L2 2854 2989 -283 2638 166 38 7 chr10 108722836 108723287 -31593478 + MLT1C LTR MaLR 1 465 -2 759 293 54 97 chr10 108723287 108723386 -31593379 + L2 LINE L2 2989 3091 -181 188 343 90 0 chr10 108723417 108723484 -31593281 + MIR SINE MIR 28 100 -162 378 0 0 0 chr10 108723870 108723912 -31592853 + (TG)n Simple_repeat Simple_repeat 2 43 0 2335 78 3 0 chr10 108723912 108724195 -31592570 - AluSx SINE Alu -28 284 1 1878 161 57 23 chr10 108724225 108724578 -31592187 + MLT1A1 LTR MaLR 1 365 0 202 260 68 27 chr10 108724680 108724753 -31592012 + MIR SINE MIR 107 182 -80 482 276 95 50 chr10 108725770 108725847 -31590918 - MER102b DNA MER1_type -1095 333 261 1155 203 61 9 chr10 108725847 108726059 -31590706 - MER58A DNA MER1_type -1 223 1 482 276 95 50 chr10 108726059 108726202 -31590563 - MER102b DNA MER1_type -1167 261 103 422 316 119 3 chr10 108726289 108726500 -31590265 - MIR SINE MIR -31 231 6 585 162 13 7 chr10 108726589 108726696 -31590069 + MLT1C LTR MaLR 382 467 0 1065 209 139 47 chr10 108726701 108726966 -31589799 + L1ME1 LINE L1 5745 6057 -109 2357 91 0 0 chr10 108726966 108727263 -31589502 - AluY SINE Alu -14 297 1 1065 209 139 47 chr10 108727263 108727379 -31589386 + L1ME1 LINE L1 6057 6161 -5 2307 88 3 3 chr10 108727401 108727697 -31589068 + AluSx SINE Alu 9 304 -8 2058 104 7 0 chr10 108729657 108729937 -31586828 + AluSx SINE Alu 1 282 -30 754 265 142 35 chr10 108729940 108730542 -31586223 - L1ME4a LINE L1 -164 5957 5292 2321 98 10 0 chr10 108730756 108731062 -31585703 - AluSc SINE Alu 0 309 1 195 129 0 0 chr10 108731210 108731241 -31585524 + (TCC)n Simple_repeat Simple_repeat 3 33 0 337 305 165 20 chr10 108731310 108731661 -31585104 - L1ME4a LINE L1 -1335 4811 4410 228 308 51 51 chr10 108731758 108731914 -31584851 - L1ME4a LINE L1 -1960 4186 4031 1978 125 6 35 chr10 108732291 108732604 -31584161 + AluSx SINE Alu 1 304 -8 304 329 93 0 chr10 108732617 108732757 -31584008 - MIR SINE MIR 0 262 110 644 228 146 6 chr10 108732861 108733019 -31583746 - MER5A DNA MER1_type 0 189 10 21 36 0 0 chr10 108733075 108733103 -31583662 + AT_rich Low_complexity Low_complexity 1 28 0 2344 107 0 0 chr10 108733105 108733415 -31583350 + AluSg SINE Alu 1 310 0 21 0 0 0 chr10 108734417 108734438 -31582327 + AT_rich Low_complexity Low_complexity 1 21 0 498 206 20 10 chr10 108735424 108735526 -31581239 + MER5A DNA MER1_type 10 112 -77 211 169 270 34 chr10 108735460 108735549 -31581216 - MER5A DNA MER1_type -34 155 46 * 1582 144 3 55 chr10 108735571 108735863 -31580902 + AluJo SINE Alu 14 290 -22 27 0 0 0 chr10 108735863 108735890 -31580875 + AT_rich Low_complexity Low_complexity 1 27 0 1501 137 4 58 chr10 108736111 108736388 -31580377 + AluJo SINE Alu 29 290 -22 372 262 54 60 chr10 108736481 108736561 -31580204 - MIR SINE MIR -112 150 69 2081 123 0 3 chr10 108736561 108736878 -31579887 - AluSx SINE Alu 0 316 1 372 262 54 60 chr10 108736878 108736945 -31579820 - MIR SINE MIR -193 69 3 218 185 31 0 chr10 108737055 108737120 -31579645 + CT-rich Low_complexity Low_complexity 3 69 0 300 314 58 16 chr10 108737154 108737275 -31579490 - L2 LINE L2 -1 3271 3146 9752 127 57 22 chr10 108737297 108737952 -31578813 + MER41A-int LTR ERV1 3873 4504 -1442 198 0 0 0 chr10 108737952 108737974 -31578791 + (CA)n Simple_repeat Simple_repeat 1 22 0 9752 127 57 22 chr10 108737974 108739816 -31576949 + MER41A-int LTR ERV1 4504 5944 -2 2877 78 2 1 chr10 108739816 108740302 -31576463 + MER41A LTR ERV1 1 554 0 2701 150 26 43 chr10 108740389 108740620 -31576145 + MER31A LTR ERV1 1 234 -251 3455 104 68 46 chr10 108740620 108741207 -31575558 - MER4A LTR ERV1 0 600 1 2701 150 26 43 chr10 108741207 108741468 -31575297 + MER31A LTR ERV1 234 485 0 203 341 128 6 chr10 108741583 108741762 -31575003 - L2 LINE L2 -372 2942 2742 1462 157 0 5 chr10 108741766 108742010 -31574755 + AluJb SINE Alu 67 309 0 4058 131 32 42 chr10 108742010 108742696 -31574069 + MER39 LTR ERV1 29 707 0 471 302 134 31 chr10 108742696 108742862 -31573903 - L2 LINE L2 -562 2752 2604 701 174 217 27 chr10 108742862 108743046 -31573719 - MER20 DNA MER1_type 0 219 1 471 302 134 31 chr10 108743046 108743200 -31573565 - L2 LINE L2 -710 2604 2399 273 194 45 15 chr10 108744818 108744885 -31571880 - MIR SINE MIR -78 130 62 926 151 0 0 chr10 108744921 108745060 -31571705 - FLAM_C SINE Alu -4 139 1 203 320 98 8 chr10 108745172 108745294 -31571471 - MIR SINE MIR -87 175 43 2157 219 171 33 chr10 108745843 108746306 -31570459 - Zaphod DNA AcHobo -3179 852 454 2136 121 0 3 chr10 108746306 108746596 -31570169 - AluSx SINE Alu -23 289 1 2157 219 171 33 chr10 108746596 108746880 -31569885 - Zaphod DNA AcHobo -3577 454 2 2156 231 117 20 chr10 108746884 108747314 -31569451 - MER50 LTR ERV1 -2 732 214 2407 82 3 10 chr10 108747314 108747619 -31569146 - AluSp SINE Alu -10 303 1 2156 231 117 20 chr10 108747619 108747847 -31568918 - MER50 LTR ERV1 -520 214 10 4309 124 74 42 chr10 108748429 108749797 -31566968 + pTR5 LTR ERV1 743 2438 0 1013 214 4 150 chr10 108749938 108750253 -31566512 + LTR8 LTR ERV1 1 286 -441 1218 196 95 79 chr10 108750353 108750797 -31565968 + LTR8A LTR ERV1 277 727 0 403 280 32 38 chr10 108750947 108751104 -31565661 + MIR SINE MIR 51 206 -56 280 276 186 7 chr10 108751396 108751541 -31565224 - MER112 DNA MER1_type -26 234 64 724 179 113 140 chr10 108751678 108752042 -31564723 - HsTC2 DNA Tc2 -79 1819 1290 321 203 0 14 chr10 108752098 108752167 -31564598 - HsTC2 DNA Tc2 -1830 68 1 463 292 50 27 chr10 108752199 108752217 -31564548 + MIR SINE MIR 27 43 -219 5178 82 132 0 chr10 108752217 108752947 -31563818 + LTR12 LTR ERV1 1 826 0 463 292 50 27 chr10 108752947 108753147 -31563618 + MIR SINE MIR 43 250 -12 615 258 35 5 chr10 108753627 108753825 -31562940 - L1ME3A LINE L1 -224 5946 5743 466 127 0 38 chr10 108753856 108753935 -31562830 - AluSp/q SINE Alu -6 307 232 2719 118 39 7 chr10 108754065 108754496 -31562269 - LTR56 LTR ERV1 0 445 1 554 210 32 54 chr10 108754954 108755037 -31561728 - MIR SINE MIR -11 251 168 3632 106 49 0 chr10 108755037 108755565 -31561200 + MER41C LTR ERV1 1 554 0 554 210 32 54 chr10 108755565 108755667 -31561098 - MIR SINE MIR -94 168 70 1352 172 49 52 chr10 108755668 108756056 -31560709 + MLT1C LTR MaLR 1 467 0 2987 133 83 51 chr10 108756398 108756990 -31559775 - LTR36 LTR ERV1 0 611 1 1638 181 52 47 chr10 108757234 108757903 -31558862 - MER4A LTR ERV1 0 695 1 211 189 0 0 chr10 108758270 108758307 -31558458 + GA-rich Low_complexity Low_complexity 4 40 0 201 217 29 29 chr10 108758921 108758990 -31557775 - MIR3 SINE MIR -46 162 94 230 292 125 17 chr10 108759730 108759850 -31556915 - MLT1K LTR MaLR -10 578 446 1977 171 0 0 chr10 108760784 108761082 -31555683 - AluJb SINE Alu -14 298 1 402 284 194 35 chr10 108761424 108761734 -31555031 - L2 LINE L2 -76 3237 2879 3381 167 67 25 chr10 108761734 108762036 -31554729 + L1MB1 LINE L1 5039 5327 -841 1484 139 146 15 chr10 108762036 108762303 -31554462 + AluJb SINE Alu 1 302 -10 3381 167 67 25 chr10 108762303 108762891 -31553874 + L1MB1 LINE L1 5327 5972 -196 527 239 139 11 chr10 108763735 108763915 -31552850 + MIR SINE MIR 43 245 -17 195 365 0 0 chr10 108764518 108764614 -31552151 - L2 LINE L2 -429 2885 2790 725 236 28 157 chr10 108765394 108765870 -31550895 + LTR67 LTR ERVL 85 486 -71 2175 121 0 3 chr10 108765870 108766167 -31550598 + AluSx SINE Alu 1 296 -16 725 236 28 157 chr10 108766167 108766225 -31550540 + LTR67 LTR ERVL 486 550 -7 24 0 0 0 chr10 108766852 108766876 -31549889 + AT_rich Low_complexity Low_complexity 1 24 0 937 227 76 57 chr10 108767134 108767592 -31549173 - L1M4 LINE L1 -2082 4064 3598 287 242 42 17 chr10 108767627 108767747 -31549018 - L1M4 LINE L1 -2614 3532 3410 1394 120 21 54 chr10 108768076 108768318 -31548447 - Tigger5 DNA MER2_type 0 2323 2090 965 178 168 14 chr10 108768334 108768542 -31548223 - Tigger5 DNA MER2_type -2080 243 4 21 57 0 0 chr10 108768544 108768579 -31548186 + AT_rich Low_complexity Low_complexity 1 35 0 1714 211 167 7 chr10 108768579 108769316 -31547449 - L1ME3A LINE L1 -30 6140 5190 2073 113 18 0 chr10 108769904 108770186 -31546579 + AluSx SINE Alu 11 297 -15 23 33 0 0 chr10 108770557 108770587 -31546178 + AT_rich Low_complexity Low_complexity 1 30 0 2181 80 42 7 chr10 108771122 108771410 -31545355 - AluSp SINE Alu -15 298 1 203 240 40 0 chr10 108771894 108771944 -31544821 - MIR SINE MIR -56 152 101 266 191 255 43 chr10 108772081 108772222 -31544543 - MER5A DNA MER1_type -3 186 16 372 264 110 56 chr10 108773152 108773369 -31543396 - MIR SINE MIR 0 262 34 2584 40 0 0 chr10 108773455 108773752 -31543013 - AluY SINE Alu -14 297 1 21 36 0 0 chr10 108773920 108773948 -31542817 + AT_rich Low_complexity Low_complexity 1 28 0 431 312 123 12 chr10 108774894 108775064 -31541701 - MIR SINE MIR -73 189 1 944 241 92 25 chr10 108775320 108775469 -31541296 + MER58B DNA MER1_type 1 139 -2281 1201 144 33 9 chr10 108775469 108775684 -31541081 + L1MC1 LINE L1 6112 6331 -2 944 241 92 25 chr10 108775684 108775850 -31540915 + MER58B DNA MER1_type 139 337 -4 368 274 70 55 chr10 108775877 108776027 -31540738 + MIR SINE MIR 7 162 -100 2652 45 3 0 chr10 108776027 108776335 -31540430 - AluY SINE Alu -2 309 1 368 274 70 55 chr10 108776335 108776385 -31540380 + MIR SINE MIR 162 210 -52 237 333 76 0 chr10 108777170 108777302 -31539463 + MIR SINE MIR 73 214 -48 308 154 0 0 chr10 108777680 108777732 -31539033 - MER96 DNA MER1_type? -1 174 123 412 286 133 36 chr10 108779057 108779305 -31537460 + L2 LINE L2 3041 3312 -1 986 161 4 124 chr10 108779811 108780060 -31536705 - MER20 DNA MER1_type 0 219 1 715 157 0 0 chr10 108780085 108780193 -31536572 - FLAM_C SINE Alu -34 109 2 570 211 125 0 chr10 108780385 108780537 -31536228 - MIR SINE MIR -15 247 77 217 306 120 60 chr10 108780660 108780717 -31536048 + MIR SINE MIR 15 67 -195 2188 93 24 7 chr10 108780717 108781008 -31535757 - AluSq SINE Alu -17 296 1 217 306 120 60 chr10 108781008 108781133 -31535632 + MIR SINE MIR 67 208 -54 2385 93 3 0 chr10 108781902 108782203 -31534562 - AluSx SINE Alu -10 302 1 690 293 21 0 chr10 108782354 108782545 -31534220 - MIR SINE MIR -2 260 66 1866 152 17 20 chr10 108783312 108783614 -31533151 + AluJb SINE Alu 10 310 -2 817 283 30 70 chr10 108783615 108784014 -31532751 - MLT1J LTR MaLR -98 413 31 319 260 70 10 chr10 108784418 108784518 -31532247 + MIR SINE MIR 42 147 -61 212 333 19 19 chr10 108785011 108785116 -31531649 - MIR SINE MIR -27 235 131 284 311 79 40 chr10 108785325 108785553 -31531212 - L2 LINE L2 -384 2930 2694 840 112 0 0 chr10 108785560 108785676 -31531089 + AluSg/x SINE Alu 193 308 -2 1867 187 0 3 chr10 108785693 108786003 -31530762 + AluJo SINE Alu 1 309 -3 578 257 0 64 chr10 108786370 108786541 -31530224 + MER63 DNA MER1_type 2 787 -275 1820 179 0 0 chr10 108786766 108787068 -31529697 + AluJo SINE Alu 1 302 -10 207 196 0 0 chr10 108787442 108787488 -31529277 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 1965 175 0 0 chr10 108787504 108787796 -31528969 + AluJb SINE Alu 5 296 -16 876 190 0 6 chr10 108788690 108788853 -31527912 - FRAM SINE Alu -2 164 3 1828 156 0 58 chr10 108788880 108789188 -31527577 - AluJb SINE Alu -20 292 3 1948 191 108 27 chr10 108789512 108789993 -31526772 - L1MB7 LINE L1 -17 6167 5648 34 42 0 0 chr10 108790208 108790256 -31526509 + AT_rich Low_complexity Low_complexity 1 48 0 576 154 47 77 chr10 108790257 108790426 -31526339 - L1ME4a LINE L1 -2 6119 5956 1800 174 3 10 chr10 108790485 108790778 -31525987 - AluJo SINE Alu -21 291 1 297 303 85 12 chr10 108790835 108791000 -31525765 + L1MC4a LINE L1 5702 5878 -1930 2513 63 0 10 chr10 108791310 108791612 -31525153 - AluY SINE Alu -12 299 1 734 316 27 65 chr10 108791612 108792197 -31524568 - L1ME4a LINE L1 -292 5829 5269 2081 150 13 3 chr10 108792511 108792818 -31523947 - AluJb SINE Alu -2 310 1 6760 74 15 10 chr10 108793189 108793646 -31523119 + L1MA1 LINE L1 5327 5780 -522 2352 115 3 0 chr10 108793646 108793951 -31522814 + AluSx SINE Alu 1 306 -6 6760 74 15 10 chr10 108793951 108794464 -31522301 + L1MA1 LINE L1 5780 6302 0 616 113 0 38 chr10 108795622 108795728 -31521037 - AluJo SINE Alu -5 307 206 875 184 13 7 chr10 108795728 108795880 -31520885 - AluJo SINE Alu -159 153 1 1979 149 24 0 chr10 108795889 108796178 -31520587 - AluJb SINE Alu -16 296 1 869 162 7 0 chr10 108796842 108796984 -31519781 - FLAM_C SINE Alu 0 143 1 1359 136 48 68 chr10 108796986 108797236 -31519529 - AluJb SINE Alu -8 304 60 241 299 0 15 chr10 108797693 108797760 -31519005 + MIR3 SINE MIR 136 201 -7 323 309 28 45 chr10 108798989 108799167 -31517598 - MIR SINE MIR -74 188 14 1831 135 59 33 chr10 108799763 108800067 -31516698 + AluJb SINE Alu 1 312 0 2181 108 23 0 chr10 108800195 108800500 -31516265 - AluSp SINE Alu 0 313 2 21 57 0 0 chr10 108802251 108802286 -31514479 + AT_rich Low_complexity Low_complexity 1 35 0 1694 181 10 7 chr10 108802897 108803189 -31513576 - AluJo SINE Alu -9 303 11 276 234 53 32 chr10 108803759 108803853 -31512912 - L2 LINE L2 -4 3268 3173 302 242 31 86 chr10 108805024 108805152 -31511613 - L1ME4a LINE L1 -15 6106 5986 816 162 0 42 chr10 108805157 108805299 -31511466 - FLAM_C SINE Alu -5 138 3 2101 154 8 13 chr10 108805352 108805729 -31511036 - THE1C LTR MaLR 0 375 1 1939 144 73 22 chr10 108806023 108806360 -31510405 + MSTA LTR MaLR 1 358 -70 1890 77 4 18 chr10 108806360 108806632 -31510133 - L1PA12 LINE L1 0 6168 5901 1939 144 73 22 chr10 108806632 108806649 -31510116 + MSTA LTR MaLR 358 373 -55 3529 135 40 2 chr10 108806649 108807219 -31509546 + MSTA-int LTR MaLR 127 718 -933 495 270 106 5 chr10 108807853 108808042 -31508723 + MIR SINE MIR 10 217 -45 2778 148 8 12 chr10 108808391 108808877 -31507888 - MER31A LTR ERV1 0 485 2 342 206 0 0 chr10 108809443 108809516 -31507249 + (TG)n Simple_repeat Simple_repeat 1 73 0 652 255 123 9 chr10 108809900 108810112 -31506653 - MIR SINE MIR -14 248 13 251 344 43 12 chr10 108810111 108810274 -31506491 + L2 LINE L2 3073 3240 -32 * 210 37 0 0 chr10 108810292 108810319 -31506446 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 500 277 99 60 chr10 108810800 108811039 -31505726 - MIR SINE MIR -15 247 3 540 253 103 61 chr10 108812562 108812728 -31504037 + L1ME4a LINE L1 5634 5792 -329 234 0 0 0 chr10 108812728 108812754 -31504011 + (TA)n Simple_repeat Simple_repeat 2 27 0 2096 136 3 13 chr10 108812754 108813056 -31503709 - AluJb SINE Alu -13 299 1 540 253 103 61 chr10 108813056 108813252 -31503513 + L1ME4a LINE L1 5791 6023 -98 334 324 22 29 chr10 108813768 108813907 -31502858 + L2 LINE L2 2716 2853 -461 672 263 46 16 chr10 108813935 108814129 -31502636 + MIR SINE MIR 42 241 -21 181 346 189 13 chr10 108814249 108814402 -31502363 - MER5A DNA MER1_type 0 189 10 930 262 80 34 chr10 108819678 108820205 -31496560 + MLT1K LTR MaLR 2 588 0 478 270 97 34 chr10 108820243 108820480 -31496285 + MIR SINE MIR 1 252 -10 528 147 21 0 chr10 108820766 108820861 -31495904 + MER5A DNA MER1_type 10 106 -83 520 249 124 11 chr10 108822115 108822300 -31494465 + MIR SINE MIR 20 225 -37 344 344 26 7 chr10 108822567 108822721 -31494044 + MIR SINE MIR 82 238 -24 2483 98 32 3 chr10 108823212 108823588 -31493177 + MER4D LTR ERV1 58 444 -459 2544 164 28 54 chr10 108823588 108823958 -31492807 + MER4D LTR ERV1 370 723 -180 2107 106 21 0 chr10 108823958 108824240 -31492525 - AluSx SINE Alu -10 302 15 2544 164 28 54 chr10 108824240 108824405 -31492360 + MER4D LTR ERV1 723 891 -12 319 281 45 124 chr10 108825055 108825322 -31491443 - MIR SINE MIR -12 250 5 697 220 75 0 chr10 108825825 108825998 -31490767 + MER5A DNA MER1_type 1 186 -3 182 289 0 0 chr10 108826472 108826517 -31490248 - MIR SINE MIR -62 146 102 327 320 41 14 chr10 108826645 108826792 -31489973 - MIR SINE MIR -4 258 108 222 298 0 0 chr10 108827799 108827856 -31488909 + GA-rich Low_complexity Low_complexity 2 58 0 569 266 103 52 chr10 108828088 108828359 -31488406 - MER102a DNA MER1_type -3 327 43 1920 172 0 10 chr10 108828359 108828667 -31488098 + AluSx SINE Alu 3 307 -5 187 163 20 61 chr10 108828902 108828951 -31487814 - MIR SINE MIR 0 262 216 814 272 127 40 chr10 108830052 108830479 -31486286 + MLT1C LTR MaLR 4 467 0 248 345 43 0 chr10 108831173 108831289 -31485476 - MIR SINE MIR -62 200 80 202 257 68 40 chr10 108831367 108831441 -31485324 + L2 LINE L2 3154 3229 -43 366 123 0 0 chr10 108832458 108832515 -31484250 + (CA)n Simple_repeat Simple_repeat 1 57 0 184 289 0 0 chr10 108832909 108832954 -31483811 + L2 LINE L2 3268 3312 -1 293 270 0 0 chr10 108833123 108833186 -31483579 + MIR SINE MIR 17 79 -183 529 213 239 16 chr10 108834121 108834322 -31482443 - MIR SINE MIR -12 250 9 362 285 174 15 chr10 108835439 108835636 -31481129 + MIR SINE MIR 17 239 -23 396 280 90 55 chr10 108837347 108837547 -31479218 - MIR SINE MIR -32 230 24 724 174 18 66 chr10 108839241 108839408 -31477357 + MIR SINE MIR 102 260 -2 353 260 44 181 chr10 108839406 108839633 -31477132 + MER91A DNA MER1_type 1 196 0 * 444 142 51 142 chr10 108839952 108840128 -31476637 - FAM SINE Alu -24 161 2 663 147 157 96 chr10 108840171 108840368 -31476397 + MER4C LTR ERV1 1 209 -256 198 103 0 0 chr10 108840909 108840938 -31475827 + (T)n Simple_repeat Simple_repeat 1 29 0 2124 50 71 14 chr10 108842330 108842612 -31474153 - AluSp SINE Alu -15 298 1 183 281 0 47 chr10 108842720 108842784 -31473981 - MIR SINE MIR -94 168 108 187 261 159 68 chr10 108843589 108843766 -31472999 + L2 LINE L2 2791 2989 -324 181 340 10 40 chr10 108843844 108843944 -31472821 + L2 LINE L2 2985 3081 -191 716 288 32 47 chr10 108844225 108844565 -31472200 + L1MEd LINE L1 282 616 -5503 36 53 0 0 chr10 108844648 108844705 -31472060 + AT_rich Low_complexity Low_complexity 1 57 0 235 330 34 15 chr10 108844708 108844972 -31471793 + L1MEd LINE L1 686 954 -5165 38 51 0 0 chr10 108845064 108845123 -31471642 + AT_rich Low_complexity Low_complexity 1 59 0 270 276 136 32 chr10 108845144 108845394 -31471371 + L1M4 LINE L1 3847 4122 -2024 641 242 66 69 chr10 108845556 108845874 -31470891 - L1MC/D LINE L1 -498 5623 5304 1957 129 9 47 chr10 108845973 108846291 -31470474 + AluSx SINE Alu 1 306 -6 329 260 211 0 chr10 108846714 108846818 -31469947 - MIR3 SINE MIR -16 192 67 321 274 108 0 chr10 108846820 108846922 -31469843 - MIR SINE MIR 0 262 150 342 207 99 103 chr10 108846942 108847155 -31469610 + MER112 DNA MER1_type 8 219 -41 1665 166 32 4 chr10 108847188 108847465 -31469300 - AluJb SINE Alu -27 285 1 269 140 60 0 chr10 108847727 108847777 -31468988 - L2 LINE L2 0 3313 3261 950 219 11 0 chr10 108847783 108847966 -31468799 + MER58A DNA MER1_type 1 185 -39 2184 118 3 0 chr10 108848293 108848590 -31468175 + AluSx SINE Alu 6 303 -9 362 287 203 47 chr10 108848949 108849249 -31467516 - L2 LINE L2 -3 3269 2923 24 0 0 0 chr10 108849324 108849348 -31467417 + AT_rich Low_complexity Low_complexity 1 24 0 2157 182 62 12 chr10 108849351 108849757 -31467008 - MSTB LTR MaLR 0 426 1 1237 159 14 41 chr10 108849770 108849990 -31466775 - AluJo SINE Alu -12 300 87 2358 99 0 0 chr10 108850056 108850358 -31466407 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 108851099 108851120 -31465645 + AT_rich Low_complexity Low_complexity 1 21 0 191 401 30 8 chr10 108852097 108852229 -31464536 + L2 LINE L2 2919 3053 -219 337 347 72 63 chr10 108852263 108852319 -31464446 - L2 LINE L2 -4 3268 3214 1766 145 72 100 chr10 108852319 108852387 -31464378 - MLT1B LTR MaLR 0 390 322 2144 115 0 3 chr10 108852387 108852673 -31464092 + AluSx SINE Alu 1 285 -27 1766 145 72 100 chr10 108852673 108852684 -31464081 - MLT1B LTR MaLR -68 322 312 266 0 29 0 chr10 108852684 108852718 -31464047 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1766 145 72 100 chr10 108852718 108853038 -31463727 - MLT1B LTR MaLR -78 312 1 337 347 72 63 chr10 108853038 108853442 -31463323 - L2 LINE L2 -58 3214 2804 228 350 10 52 chr10 108853552 108853649 -31463116 + L2 LINE L2 3161 3253 -19 698 273 115 44 chr10 108854771 108855292 -31461473 + L1ME3A LINE L1 4625 5182 -964 270 286 29 33 chr10 108855342 108855552 -31461213 + L1ME3A LINE L1 5272 5480 -2328 306 271 0 0 chr10 108855557 108855627 -31461138 + MIR SINE MIR 183 252 -10 332 304 174 7 chr10 108855874 108856012 -31460753 - MER91A DNA MER1_type -17 179 19 381 344 40 36 chr10 108856026 108856302 -31460463 + L1ME3A LINE L1 5609 5885 -285 956 209 23 0 chr10 108858114 108858286 -31458479 - MER45A DNA AcHobo 0 178 3 257 227 0 67 chr10 108859020 108859095 -31457670 + L2 LINE L2 3203 3272 0 206 333 56 0 chr10 108860278 108860350 -31456415 + L2 LINE L2 3238 3313 0 377 113 0 0 chr10 108860409 108860462 -31456303 - MLT1B LTR MaLR 0 390 338 * 558 130 157 0 chr10 108860458 108860573 -31456192 - MLT1C LTR MaLR -332 135 3 258 273 16 62 chr10 108860990 108861118 -31455647 - MIR SINE MIR -1 261 140 256 200 27 0 chr10 108861149 108861224 -31455541 + (TA)n Simple_repeat Simple_repeat 2 78 0 315 272 0 22 chr10 108861231 108861323 -31455442 - L1MC4 LINE L1 -1339 6703 6614 231 269 0 43 chr10 108861337 108861430 -31455335 - L1MC4 LINE L1 -1339 6703 6615 195 184 0 0 chr10 108861430 108861468 -31455297 + (CATATA)n Simple_repeat Simple_repeat 1 38 0 253 208 0 62 chr10 108861471 108861567 -31455198 - L1MC4 LINE L1 -1339 6703 6614 2254 102 23 0 chr10 108862943 108863246 -31453519 + AluSx SINE Alu 1 310 -2 2979 96 7 51 chr10 108863665 108863917 -31452848 - MSTA LTR MaLR 0 428 203 3523 71 40 2 chr10 108863917 108864369 -31452396 - L1PA12 LINE L1 -15 6153 5685 2979 96 7 51 chr10 108864369 108864564 -31452201 - MSTA LTR MaLR -225 203 1 21 0 0 0 chr10 108864872 108864893 -31451872 + AT_rich Low_complexity Low_complexity 1 21 0 1047 183 0 0 chr10 108865102 108865271 -31451494 - AluJb SINE Alu -6 306 138 448 290 101 44 chr10 108865891 108866468 -31450297 + L2 LINE L2 2361 3024 -248 205 300 167 58 chr10 108866620 108866740 -31450025 + L2 LINE L2 3122 3254 -18 408 55 0 0 chr10 108867850 108867905 -31448860 + (CA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr10 108867925 108867949 -31448816 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 108868642 108868666 -31448099 + AT_rich Low_complexity Low_complexity 1 24 0 1488 217 35 32 chr10 108869655 108869993 -31446772 - L1ME3A LINE L1 0 6170 5829 1119 192 20 0 chr10 108869993 108870196 -31446569 - MER3 DNA MER1_type -1 208 2 1488 217 35 32 chr10 108870196 108870258 -31446507 - L1ME3A LINE L1 -341 5829 5769 2072 123 36 0 chr10 108870280 108870581 -31446184 - AluSx SINE Alu 0 312 1 2489 104 48 28 chr10 108873699 108874056 -31442709 - THE1B LTR MaLR 0 364 1 26 30 0 0 chr10 108874086 108874119 -31442646 + AT_rich Low_complexity Low_complexity 1 33 0 278 228 51 36 chr10 108875017 108875145 -31441620 + MIR SINE MIR 19 241 -21 22 0 0 0 chr10 108875190 108875212 -31441553 + AT_rich Low_complexity Low_complexity 1 22 0 2354 115 0 0 chr10 108875493 108875805 -31440960 + AluSx SINE Alu 1 312 0 220 241 121 0 chr10 108875913 108875971 -31440794 - L2 LINE L2 -1 3312 3248 802 271 35 97 chr10 108876372 108876774 -31439991 + L1ME4a LINE L1 4214 4560 -1586 1531 151 13 84 chr10 108876774 108877072 -31439693 + AluJo SINE Alu 1 277 -35 802 271 35 97 chr10 108877072 108877332 -31439433 + L1ME4a LINE L1 4560 4835 -1311 1722 139 79 50 chr10 108877600 108877903 -31438862 + AluJb SINE Alu 1 312 0 484 264 101 48 chr10 108877910 108878457 -31438308 + L1ME4a LINE L1 5297 5904 -217 249 208 0 0 chr10 108878639 108878711 -31438054 + (TA)n Simple_repeat Simple_repeat 1 72 0 813 106 0 35 chr10 108878856 108878969 -31437796 + AluSx SINE Alu 2 110 -202 5994 62 15 30 chr10 108878971 108879748 -31437017 - MER4E LTR ERV1 0 766 1 1461 93 10 24 chr10 108879748 108879953 -31436812 + AluSx SINE Alu 107 308 -2 270 295 89 27 chr10 108879978 108880090 -31436675 + MIR SINE MIR 57 175 -87 259 268 116 58 chr10 108881478 108881616 -31435149 + L2 LINE L2 3158 3303 -10 348 266 13 13 chr10 108882346 108882425 -31434340 + MER5A DNA MER1_type 61 139 -50 2641 180 50 0 chr10 108882473 108882973 -31433792 - L1MB5 LINE L1 -47 6127 5603 643 272 61 14 chr10 108883082 108883295 -31433470 + MIR SINE MIR 16 238 -24 588 216 8 16 chr10 108884156 108884281 -31432484 + FLAM_C SINE Alu 19 142 -1 1824 158 0 3 chr10 108884289 108884614 -31432151 + AluJb SINE Alu 1 324 0 469 264 128 72 chr10 108885424 108885769 -31430996 - MLT1I LTR MaLR -20 389 26 1861 156 85 20 chr10 108885983 108886335 -31430430 + THE1C LTR MaLR 1 375 0 442 363 99 57 chr10 108886531 108886845 -31429920 + L2 LINE L2 2946 3272 0 270 0 0 0 chr10 108887176 108887206 -31429559 + (CA)n Simple_repeat Simple_repeat 2 31 0 406 290 104 27 chr10 108887340 108887637 -31429128 + L1ME4a LINE L1 5607 5926 -195 317 191 12 60 chr10 108887997 108888081 -31428684 - MER116 DNA Mariner 0 80 1 873 122 8 0 chr10 108888957 108889080 -31427685 + FLAM_C SINE Alu 1 124 -19 292 323 24 0 chr10 108889389 108889516 -31427249 + L1ME4a LINE L1 5962 6091 -30 2312 112 3 0 chr10 108889518 108889830 -31426935 + AluSq SINE Alu 1 313 0 353 200 23 100 chr10 108891706 108891836 -31424929 - MIR SINE MIR -1 261 142 280 299 84 0 chr10 108893081 108893188 -31423577 + L2 LINE L2 3157 3272 0 519 277 69 5 chr10 108893231 108893419 -31423346 + L1MC4a LINE L1 3631 3830 -2316 967 299 29 5 chr10 108893435 108893818 -31422947 + L1MC4a LINE L1 5531 5824 -297 461 282 115 6 chr10 108893872 108894046 -31422719 + MIR SINE MIR 70 262 0 24 32 0 0 chr10 108894238 108894269 -31422496 + AT_rich Low_complexity Low_complexity 1 31 0 2408 83 3 3 chr10 108896062 108896363 -31420402 - AluSx SINE Alu -11 301 1 879 37 0 0 chr10 108899792 108899899 -31416866 + (GA)n Simple_repeat Simple_repeat 1 107 0 260 351 58 22 chr10 108901318 108901463 -31415302 + L2 LINE L2 2791 2938 -334 429 284 46 7 chr10 108901723 108901861 -31414904 + MIR SINE MIR 9 156 -102 234 0 0 0 chr10 108902598 108902624 -31414141 + (TG)n Simple_repeat Simple_repeat 2 27 0 309 323 31 0 chr10 108903099 108903195 -31413570 - L2 LINE L2 -25 3288 3190 482 177 0 0 chr10 108903247 108903326 -31413439 + U13 snRNA snRNA 26 104 0 1931 160 0 0 chr10 108903582 108903869 -31412896 - AluSx SINE Alu -25 287 1 296 221 15 59 chr10 108903967 108904035 -31412730 + L2 LINE L2 3246 3310 -3 506 175 56 40 chr10 108905210 108905336 -31411429 - L1ME4a LINE L1 -5 6116 5989 317 292 22 11 chr10 108905521 108905610 -31411155 + MIR SINE MIR 34 123 -139 479 264 90 26 chr10 108906176 108906331 -31410434 + MER5B DNA MER1_type 7 171 -7 2472 114 19 30 chr10 108906482 108906850 -31409915 + THE1B LTR MaLR 1 364 0 2388 64 41 0 chr10 108908022 108908317 -31408448 - AluY SINE Alu -2 309 3 182 36 0 36 chr10 108908413 108908441 -31408324 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1775 145 52 3 chr10 108909251 108909540 -31407225 + AluJo SINE Alu 1 303 -9 434 345 73 10 chr10 108909586 108909792 -31406973 + MIR SINE MIR 8 226 -36 288 137 0 0 chr10 108910708 108910759 -31406006 + (CAT)n Simple_repeat Simple_repeat 3 53 0 228 293 229 15 chr10 108910883 108911088 -31405677 + MIR SINE MIR 14 262 0 189 0 0 0 chr10 108911114 108911135 -31405630 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 2212 92 11 0 chr10 108911135 108911418 -31405347 - AluSx SINE Alu -26 286 1 391 291 43 43 chr10 108911625 108911766 -31404999 + MIR SINE MIR 14 154 -108 241 272 62 12 chr10 108911898 108911979 -31404786 - MIR SINE MIR -157 105 21 551 255 105 90 chr10 108911999 108912239 -31404526 - L1MEc LINE L1 -2913 3302 3067 1809 179 0 3 chr10 108912239 108912535 -31404230 + AluJo SINE Alu 1 295 -17 551 255 105 90 chr10 108912535 108913201 -31403564 - L1MEc LINE L1 -3148 3067 2383 377 345 31 21 chr10 108913737 108913928 -31402837 - L1MEc LINE L1 -4584 1812 1620 398 312 20 35 chr10 108913943 108914142 -31402623 - HAL1 LINE L1 -939 1568 1373 2396 263 101 46 chr10 108914169 108914348 -31402417 - L1MEc LINE L1 -4886 1319 1151 1977 103 0 0 chr10 108914348 108914630 -31402135 - AluSx SINE Alu 0 314 33 2396 263 101 46 chr10 108914630 108915616 -31401149 - L1MEc LINE L1 -5054 1151 89 265 163 102 0 chr10 108915636 108915685 -31401080 + MIR SINE MIR 122 175 -87 23 54 0 0 chr10 108915734 108915771 -31400994 + AT_rich Low_complexity Low_complexity 1 37 0 286 268 93 0 chr10 108916163 108916260 -31400505 + L2 LINE L2 3145 3250 -22 359 324 36 93 chr10 108916272 108916519 -31400246 + L2 LINE L2 2978 3210 -62 398 20 20 0 chr10 108917122 108917173 -31399592 + (CAT)n Simple_repeat Simple_repeat 2 53 0 377 268 121 19 chr10 108917591 108917748 -31399017 - Charlie8 DNA MER1_type -2243 174 2 1696 47 0 14 chr10 108918085 108918297 -31398468 - AluY SINE Alu -5 306 98 417 304 78 36 chr10 108918589 108918895 -31397870 - LTR16C LTR ERVL 0 491 173 221 250 0 0 chr10 108919329 108919377 -31397388 - MIR SINE MIR -2 260 213 541 289 80 22 chr10 108920065 108920290 -31396475 - MIR SINE MIR -11 251 14 333 262 221 13 chr10 108920396 108920545 -31396220 + MER5A DNA MER1_type 9 188 -1 429 362 31 4 chr10 108920584 108920813 -31395952 + MIR SINE MIR 15 249 -13 186 296 8 128 chr10 108921200 108921325 -31395440 - MIR SINE MIR -95 167 58 1487 233 27 12 chr10 108921332 108921667 -31395098 + MER58B DNA MER1_type 1 340 -1 2389 85 0 0 chr10 108921689 108921996 -31394769 + AluY SINE Alu 1 307 -4 432 252 68 0 chr10 108923136 108923239 -31393526 + MIR SINE MIR 132 241 -21 225 209 0 0 chr10 108923402 108923445 -31393320 - MIR SINE MIR -114 148 106 858 161 0 0 chr10 108923946 108924083 -31392682 + L1PA15 LINE L1 6029 6165 0 2025 139 0 16 chr10 108924159 108924475 -31392290 - AluJo SINE Alu -1 311 1 533 312 94 13 chr10 108925060 108925294 -31391471 + MIR SINE MIR 10 262 0 1990 113 47 4 chr10 108925326 108925632 -31391133 + AluSx SINE Alu 1 318 0 789 248 69 83 chr10 108925824 108926256 -31390509 - MLT1H LTR MaLR -1 548 123 189 252 70 113 chr10 108927425 108927540 -31389225 - L3b LINE CR1 -9 1574 1465 533 288 91 14 chr10 108928349 108928568 -31388197 + MIR SINE MIR 2 237 -25 180 301 0 55 chr10 108928678 108928751 -31388014 - L2 LINE L2 -339 2975 2907 509 242 98 0 chr10 108928990 108929122 -31387643 - MIR SINE MIR -78 184 40 1696 168 13 23 chr10 108929375 108929679 -31387086 + AluJb SINE Alu 1 301 -11 231 261 0 15 chr10 108929830 108929895 -31386870 + C-rich Low_complexity Low_complexity 2 65 0 182 0 107 0 chr10 108929955 108929983 -31386782 + A-rich Low_complexity Low_complexity 2 32 0 22 0 0 0 chr10 108930014 108930036 -31386729 + AT_rich Low_complexity Low_complexity 1 22 0 343 277 131 24 chr10 108930148 108930354 -31386411 - L1 LINE L1 -1786 4360 4133 1405 181 73 3 chr10 108934142 108934445 -31382320 - MER33 DNA MER1_type 0 324 1 303 321 164 8 chr10 108934609 108934743 -31382022 - L2 LINE L2 -3 3269 3115 333 263 106 46 chr10 108935229 108935512 -31381253 - L1ME2 LINE L1 -226 5938 5631 890 300 37 37 chr10 108935672 108935930 -31380835 + L1ME LINE L1 5258 5518 -603 2262 106 0 0 chr10 108935930 108936223 -31380542 - AluSc SINE Alu -16 293 1 890 300 37 37 chr10 108936223 108936424 -31380341 + L1ME LINE L1 5517 5717 -404 1524 196 23 0 chr10 108936524 108936790 -31379975 - AluJo SINE Alu -20 292 21 200 286 65 83 chr10 108936795 108936963 -31379802 - L2 LINE L2 -197 3075 2911 565 225 204 5 chr10 108937449 108937640 -31379125 + MIR SINE MIR 34 262 0 347 203 328 11 chr10 108938288 108938472 -31378293 + MIR SINE MIR 20 256 -6 2032 113 7 7 chr10 108938622 108938904 -31377861 + AluSx SINE Alu 1 282 -30 255 327 170 45 chr10 108939042 108939424 -31377341 + L2 LINE L2 2046 2475 -839 270 193 48 0 chr10 108939615 108939698 -31377067 + Charlie7 DNA MER1_type 2436 2522 -90 2342 171 62 2 chr10 108939770 108940174 -31376591 - MSTA LTR MaLR 0 428 1 722 249 34 0 chr10 108940481 108940658 -31376107 + MIR SINE MIR 49 231 -31 266 224 161 83 chr10 108941356 108941561 -31375204 + L1P5 LINE L1 5257 5477 -674 752 190 28 21 chr10 108941567 108941709 -31375056 - MLT1E1 LTR MaLR 0 654 512 2857 22 0 0 chr10 108941740 108942097 -31374668 - AluYb8 SINE Alu 0 357 1 619 248 86 116 chr10 108942117 108942746 -31374019 + L1ME3A LINE L1 5561 6170 0 752 172 0 60 chr10 108943018 108943179 -31373586 + AluJb SINE Alu 174 312 0 2546 27 0 10 chr10 108943250 108943544 -31373221 - AluY SINE Alu -20 291 1 2134 118 0 0 chr10 108944445 108944725 -31372040 - AluSx SINE Alu -32 280 1 2307 104 0 0 chr10 108945730 108946028 -31370737 + AluSg SINE Alu 1 298 -12 2051 151 0 0 chr10 108948463 108948775 -31367990 + AluJo SINE Alu 1 312 0 1316 166 72 91 chr10 108950433 108950740 -31366025 - AluJo SINE Alu -11 301 1 387 0 0 0 chr10 108954092 108954135 -31362630 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 823 163 8 0 chr10 108954142 108954265 -31362500 - FLAM_C SINE Alu -18 125 2 414 255 106 35 chr10 108954857 108954998 -31361767 + MER5A DNA MER1_type 38 188 -1 234 198 9 144 chr10 108955122 108955169 -31361596 - Charlie7 DNA MER1_type 0 2612 2587 1784 144 24 34 chr10 108955169 108955461 -31361304 - AluSx SINE Alu -23 289 1 234 198 9 144 chr10 108955461 108955524 -31361241 - Charlie7 DNA MER1_type -25 2587 2517 22 0 0 0 chr10 108955559 108955581 -31361184 + AT_rich Low_complexity Low_complexity 1 22 0 32 86 0 0 chr10 108955614 108955695 -31361070 + AT_rich Low_complexity Low_complexity 1 81 0 312 250 76 0 chr10 108955723 108955815 -31360950 - Charlie7 DNA MER1_type -2513 99 1 530 144 125 10 chr10 108956052 108956156 -31360609 - MER3 DNA MER1_type -27 182 67 259 297 85 38 chr10 108956336 108956572 -31360193 + L3b LINE CR1 1127 1373 -210 324 0 0 0 chr10 108957184 108957220 -31359545 + (TG)n Simple_repeat Simple_repeat 2 37 0 1130 273 109 5 chr10 108959101 108959541 -31357224 - LTR16C LTR ERVL -2 489 4 234 167 48 0 chr10 108959971 108960013 -31356752 + MIR SINE MIR 24 67 -195 417 191 45 0 chr10 108960025 108960114 -31356651 + MIR SINE MIR 170 262 0 25 51 0 0 chr10 108961385 108961424 -31355341 + AT_rich Low_complexity Low_complexity 1 39 0 330 244 98 0 chr10 108961927 108962009 -31354756 + L1MC4 LINE L1 6613 6702 -1340 13377 106 11 10 chr10 108962125 108964531 -31352234 - L1PA10 LINE L1 -337 5831 3424 3544 88 7 5 chr10 108964536 108964979 -31351786 + MLT2A1 LTR ERVL 1 444 0 44787 60 11 7 chr10 108964979 108970490 -31346275 + HERVL-A1 LTR ERVL 1 5537 -117 1353 59 0 6 chr10 108970493 108970663 -31346102 - HERVL-A1 LTR ERVL -5485 169 1 229 31 125 0 chr10 108970663 108970695 -31346070 - MLT2A1 LTR ERVL 0 453 418 236 197 0 14 chr10 108970701 108970764 -31346001 + (TA)n Simple_repeat Simple_repeat 1 64 -6 2124 138 0 3 chr10 108970764 108971060 -31345705 + AluSc SINE Alu 1 295 -14 236 197 0 14 chr10 108971060 108971067 -31345698 + (TA)n Simple_repeat Simple_repeat 64 70 0 2712 73 86 11 chr10 108971126 108971498 -31345267 - MLT2A1 LTR ERVL -44 400 1 3215 244 76 32 chr10 108971498 108972637 -31344128 - L1M4 LINE L1 -2002 4144 2955 914 242 32 18 chr10 108972625 108972851 -31343914 - L1M4 LINE L1 -912 5234 5009 * 2964 129 9 17 chr10 108972851 108973377 -31343388 - L1MA7 LINE L1 -120 6192 4946 703 271 25 10 chr10 108973380 108973579 -31343186 + MIR SINE MIR 53 254 -8 1022 159 0 0 chr10 108973956 108974119 -31342646 - AluSg/x SINE Alu -13 299 137 798 219 18 0 chr10 108974226 108974395 -31342370 - MER5B DNA MER1_type -6 172 1 1174 351 95 29 chr10 108974586 108975420 -31341345 + L2 LINE L2 222 1110 -2204 2850 131 140 9 chr10 108975540 108975983 -31340782 - MER61D LTR ERV1 0 501 1 28 0 0 0 chr10 108976069 108976097 -31340668 + AT_rich Low_complexity Low_complexity 1 28 0 822 168 0 36 chr10 108976097 108976234 -31340531 - FLAM_C SINE Alu 0 133 2 498 307 179 21 chr10 108976237 108976657 -31340108 + L2 LINE L2 1519 2004 -1310 1097 206 82 45 chr10 108976657 108976949 -31339816 - L1MD3 LINE L1 -361 7634 7332 839 183 0 0 chr10 108977297 108977428 -31339337 - FLAM_A SINE Alu -1 132 2 589 354 17 4 chr10 108977490 108977727 -31339038 + Charlie8 DNA MER1_type 33 272 -2145 481 383 39 9 chr10 108977785 108978119 -31338646 + L3 LINE CR1 1227 1570 -7 2642 50 0 0 chr10 108981272 108981572 -31335193 + AluY SINE Alu 1 300 -11 766 254 77 75 chr10 108981853 108982156 -31334609 + MLT1K LTR MaLR 141 447 -141 882 0 0 0 chr10 108982156 108982254 -31334511 + (GA)n Simple_repeat Simple_repeat 1 98 0 766 254 77 75 chr10 108982254 108982391 -31334374 + MLT1K LTR MaLR 447 582 -6 1309 259 32 15 chr10 108983807 108984212 -31332553 + LTR16C LTR ERVL 80 491 0 631 264 22 11 chr10 108984785 108984967 -31331798 + MIR SINE MIR 79 262 0 469 282 44 6 chr10 108986201 108986382 -31330383 + L1ME4a LINE L1 5797 5984 -137 389 139 47 35 chr10 108986391 108986477 -31330288 + L1ME4a LINE L1 6035 6121 0 490 310 15 30 chr10 108986518 108986718 -31330047 - MIR SINE MIR -46 216 20 629 256 105 11 chr10 108986991 108987182 -31329583 - MER3 DNA MER1_type 0 209 1 424 270 63 0 chr10 108987245 108987356 -31329409 + L2 LINE L2 3179 3296 -17 702 286 36 111 chr10 108987365 108987920 -31328845 + L2 LINE L2 2750 3261 -11 324 267 23 0 chr10 108987904 108987990 -31328775 - L2 LINE L2 -10 3303 3216 * 1009 228 47 9 chr10 108988334 108988567 -31328198 - MIR SINE MIR -14 248 7 622 277 55 126 chr10 108988984 108989461 -31327304 - L2 LINE L2 -26 3246 2804 345 250 13 0 chr10 108989473 108989549 -31327216 - MER94 DNA DNA -2 132 56 241 272 47 83 chr10 108989556 108989725 -31327040 - L2 LINE L2 -494 2820 2658 208 148 0 37 chr10 108990227 108990281 -31326484 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 2762 10 0 0 chr10 108991241 108991552 -31325213 - AluYb8 SINE Alu -7 311 1 675 259 44 51 chr10 108991990 108992264 -31324501 - MER102b DNA MER1_type -15 326 55 3664 135 28 22 chr10 108992619 108993459 -31323306 + L1PB4 LINE L1 5289 6150 -1 346 153 93 246 chr10 108993508 108993610 -31323155 - MIR SINE MIR -15 247 131 2263 97 58 25 chr10 108993610 108993970 -31322795 + THE1C LTR MaLR 1 372 -3 1494 153 35 11 chr10 108993970 108994231 -31322534 - AluJb SINE Alu -33 279 13 346 153 93 246 chr10 108994231 108994251 -31322514 - MIR SINE MIR -130 132 111 2286 109 0 0 chr10 108994251 108994562 -31322203 - AluY SINE Alu 0 311 1 346 153 93 246 chr10 108994562 108994652 -31322113 - MIR SINE MIR -151 111 66 1536 184 20 13 chr10 108994999 108995464 -31321301 - AluJb SINE Alu 0 469 3 36 23 0 0 chr10 108996215 108996258 -31320507 + AT_rich Low_complexity Low_complexity 1 43 0 254 207 0 35 chr10 108996530 108996588 -31320177 + L2 LINE L2 3210 3265 -7 4650 129 10 17 chr10 108996876 108997072 -31319693 - L1MA4 LINE L1 -4 6179 5983 1987 136 0 0 chr10 108997072 108997367 -31319398 - AluSx SINE Alu -16 296 2 4650 129 10 17 chr10 108997367 108998057 -31318708 - L1MA4 LINE L1 -200 5983 5258 2084 145 30 30 chr10 108998252 108998625 -31318140 + MER83C LTR ERV1 1 373 0 279 288 44 50 chr10 108998676 108998836 -31317929 - MIR SINE MIR -9 253 95 3085 153 31 53 chr10 108999014 108999659 -31317106 - MER4D LTR ERV1 0 878 277 793 144 0 0 chr10 108999798 108999916 -31316849 - FLAM_C SINE Alu -15 118 1 359 328 11 44 chr10 109000092 109000255 -31316510 - MIR SINE MIR -13 249 91 1549 175 6 46 chr10 109000255 109000580 -31316185 + AluJo SINE Alu 1 312 0 359 328 11 44 chr10 109000580 109000599 -31316166 - MIR SINE MIR -171 91 73 273 242 77 11 chr10 109001846 109001937 -31314828 - MIR SINE MIR 0 262 166 1802 136 4 0 chr10 109002240 109002550 -31314215 + AluSx SINE Alu 1 311 0 3608 140 63 5 chr10 109003364 109003998 -31312767 - L1MA8 LINE L1 -5 6286 5616 185 240 40 0 chr10 109004494 109004544 -31312221 + MIR SINE MIR 204 255 -7 22 0 0 0 chr10 109005096 109005118 -31311647 + AT_rich Low_complexity Low_complexity 1 22 0 374 301 171 20 chr10 109005791 109005990 -31310775 + MIR SINE MIR 34 262 0 195 114 0 0 chr10 109006345 109006380 -31310385 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 50 0 0 chr10 109007448 109007488 -31309277 + (CA)n Simple_repeat Simple_repeat 2 41 0 2319 57 0 0 chr10 109007544 109007859 -31308906 + AluY SINE Alu 1 315 0 507 300 110 5 chr10 109008290 109008497 -31308268 + MIR SINE MIR 36 262 0 226 259 33 19 chr10 109009663 109009731 -31307034 + MER5A DNA MER1_type 31 109 -80 185 182 0 0 chr10 109009739 109009772 -31306993 - MER5B DNA MER1_type -144 34 2 227 258 177 0 chr10 109009948 109010010 -31306755 - MIR SINE MIR -170 92 20 27 0 0 0 chr10 109010961 109010988 -31305777 + AT_rich Low_complexity Low_complexity 1 27 0 1070 144 5 5 chr10 109011005 109011193 -31305572 - L1MB3 LINE L1 -22 6161 5974 452 287 110 0 chr10 109011234 109011370 -31305395 - MER5A DNA MER1_type -20 169 19 978 198 39 0 chr10 109011796 109011978 -31304787 + MER5A DNA MER1_type 1 189 0 508 195 65 24 chr10 109012856 109012979 -31303786 - L2 LINE L2 -4 3309 3182 632 233 122 90 chr10 109013041 109013514 -31303251 - MLT1H LTR MaLR -1 548 20 25 0 0 0 chr10 109013994 109014019 -31302746 + AT_rich Low_complexity Low_complexity 1 25 0 1281 147 4 43 chr10 109014019 109014251 -31302514 - AluJo SINE Alu -22 290 68 252 395 26 13 chr10 109014389 109014541 -31302224 + MER5A DNA MER1_type 7 160 -29 343 169 17 0 chr10 109014630 109014689 -31302076 + L2 LINE L2 3001 3060 -212 449 257 29 51 chr10 109014809 109014984 -31301781 - MIR3 SINE MIR -28 180 10 198 204 0 23 chr10 109015640 109015684 -31301081 + L2 LINE L2 3271 3313 0 290 325 98 25 chr10 109015776 109015939 -31300826 + MIR SINE MIR 31 205 -57 375 247 59 0 chr10 109016221 109016306 -31300459 + MIR SINE MIR 35 124 -84 491 214 143 0 chr10 109016517 109016629 -31300136 + MER5A DNA MER1_type 2 129 -60 983 176 33 52 chr10 109017452 109017662 -31299103 + MER3 DNA MER1_type 1 206 -3 1147 230 113 53 chr10 109018095 109018565 -31298200 - LTR33A LTR ERVL -1 522 25 192 40 0 0 chr10 109018568 109018593 -31298172 + (TG)n Simple_repeat Simple_repeat 2 26 0 213 258 40 89 chr10 109018855 109018979 -31297786 - L2 LINE L2 -187 3085 2968 1972 123 7 7 chr10 109019022 109019322 -31297443 - AluSx SINE Alu -12 300 1 216 184 0 0 chr10 109019772 109019821 -31296944 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 256 220 77 44 chr10 109019986 109020077 -31296688 - L2 LINE L2 -40 3273 3180 423 257 78 36 chr10 109020299 109020444 -31296321 - MIR SINE MIR -63 145 3 408 322 50 6 chr10 109021802 109021982 -31294783 + MIR SINE MIR 47 234 -28 4058 96 46 11 chr10 109022224 109022831 -31293934 + L1MA2 LINE L1 5677 6304 0 1668 105 0 126 chr10 109023621 109023946 -31292819 - AluSg1 SINE Alu -25 284 1 763 279 75 4 chr10 109024012 109024238 -31292527 - MIR SINE MIR -12 250 9 432 265 38 15 chr10 109024258 109024390 -31292375 - MIR3 SINE MIR -61 147 13 243 0 0 0 chr10 109025062 109025089 -31291676 + (T)n Simple_repeat Simple_repeat 1 27 0 237 214 0 0 chr10 109025156 109025212 -31291553 + L2 LINE L2 3216 3271 -1 290 392 77 36 chr10 109026380 109026602 -31290163 + L2 LINE L2 3025 3255 -17 428 202 188 58 chr10 109026661 109026924 -31289841 + MLT1I LTR MaLR 81 383 -26 219 36 0 0 chr10 109027232 109027260 -31289505 + (TTG)n Simple_repeat Simple_repeat 2 29 0 233 283 139 56 chr10 109027701 109027881 -31288884 - L2 LINE L2 -20 3293 3099 2031 124 3 7 chr10 109028246 109028545 -31288220 + AluSx SINE Alu 1 298 -14 329 346 21 16 chr10 109029216 109029404 -31287361 + L2 LINE L2 2618 2806 -508 2171 147 76 0 chr10 109029415 109029811 -31286954 + L1MB3 LINE L1 5755 6180 -3 588 301 33 0 chr10 109030190 109030373 -31286392 + LTR33 LTR ERVL 1 189 -332 257 224 168 101 chr10 109030419 109030598 -31286167 - MLT1J LTR MaLR -238 273 83 353 88 35 0 chr10 109030616 109030673 -31286092 + CT-rich Low_complexity Low_complexity 2 60 0 43675 34 22 4 chr10 109030680 109036723 -31280042 - L1PA3 LINE L1 0 6155 2 952 94 18 18 chr10 109036723 109036893 -31279872 + (TTTC)n Simple_repeat Simple_repeat 1 170 0 803 106 0 0 chr10 109036919 109037023 -31279742 - AluSp/q SINE Alu -34 279 176 1217 85 6 0 chr10 109037049 109037225 -31279540 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 321 26 0 0 chr10 109037227 109037265 -31279500 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1972 133 0 0 chr10 109037292 109037571 -31279194 - AluSq SINE Alu -34 279 1 670 302 45 16 chr10 109038302 109038544 -31278221 + MIR SINE MIR 13 261 -1 183 156 0 0 chr10 109038937 109038969 -31277796 + GA-rich Low_complexity Low_complexity 3 34 0 408 341 23 17 chr10 109039269 109039442 -31277323 + MIR SINE MIR 81 254 -8 448 126 0 15 chr10 109039546 109039635 -31277130 - L1MA8 LINE L1 -302 5989 5905 1654 153 23 10 chr10 109039636 109039937 -31276828 + L1MA8 LINE L1 5984 6288 -3 347 340 96 43 chr10 109040960 109041169 -31275596 + L2 LINE L2 3048 3267 -5 387 0 0 0 chr10 109041324 109041367 -31275398 + (TG)n Simple_repeat Simple_repeat 2 44 0 345 276 89 24 chr10 109041453 109041576 -31275189 - L2 LINE L2 -1 3271 3141 530 292 45 22 chr10 109041609 109041787 -31274978 - MIR SINE MIR -1 261 80 2128 115 0 4 chr10 109043073 109043400 -31273365 + AluSx SINE Alu 5 330 0 270 146 0 0 chr10 109044001 109044049 -31272716 - L2 LINE L2 0 3272 3225 1265 260 83 25 chr10 109044051 109044482 -31272283 + MLT1K LTR MaLR 132 587 -1 1343 279 82 8 chr10 109045482 109045956 -31270809 - LTR33 LTR ERVL -9 512 4 2523 122 84 5 chr10 109046071 109046465 -31270300 - MSTA LTR MaLR 0 428 4 2367 195 14 0 chr10 109046579 109046999 -31269766 - MSTB LTR MaLR 0 426 1 294 294 73 0 chr10 109049512 109049621 -31267144 + MIR SINE MIR 74 190 -72 891 193 21 73 chr10 109050108 109050341 -31266424 + MER58A DNA MER1_type 2 222 -2 283 318 128 0 chr10 109051622 109051770 -31264995 - MIR3 SINE MIR -8 200 34 350 310 65 27 chr10 109052015 109052199 -31264566 - MIR SINE MIR -23 239 49 1873 155 10 3 chr10 109052324 109052614 -31264151 - AluJb SINE Alu -20 292 1 283 354 8 8 chr10 109053456 109053586 -31263179 + MIR3 SINE MIR 35 164 -44 1166 150 0 0 chr10 109053587 109053760 -31263005 - FRAM SINE Alu -4 172 1 830 296 4 16 chr10 109054923 109055166 -31261599 - MIR SINE MIR -2 260 21 508 202 178 0 chr10 109056299 109056428 -31260337 - MER5A DNA MER1_type -29 160 9 314 342 25 40 chr10 109056563 109056762 -31260003 - MER117 DNA MER1_type -1 196 1 614 266 35 0 chr10 109056984 109057153 -31259612 - MER5B DNA MER1_type 0 178 4 839 283 49 29 chr10 109058948 109059255 -31257510 - MER102a DNA MER1_type -15 315 3 213 141 16 31 chr10 109060971 109061035 -31255730 + (ATG)n Simple_repeat Simple_repeat 2 64 0 2310 79 0 0 chr10 109061100 109061406 -31255359 + AluY SINE Alu 5 310 0 263 279 106 0 chr10 109061411 109061515 -31255250 - MIR SINE MIR -56 206 92 296 305 184 5 chr10 109061656 109061846 -31254919 + MIR SINE MIR 17 240 -22 531 320 132 0 chr10 109062020 109062248 -31254517 - MIR SINE MIR 0 262 5 300 248 18 37 chr10 109062297 109062406 -31254359 - MIR SINE MIR -78 130 24 211 240 20 0 chr10 109063406 109063456 -31253309 + L2 LINE L2 3261 3311 -2 1293 227 51 9 chr10 109064161 109064366 -31252399 - L1MD3 LINE L1 -10 7985 7759 3966 143 11 8 chr10 109064366 109065018 -31251747 - L1PA16 LINE L1 0 6166 5513 1293 227 51 9 chr10 109065018 109065143 -31251622 - L1MD3 LINE L1 -236 7759 7641 651 180 0 8 chr10 109065141 109065263 -31251502 + L1MD3 LINE L1 7522 7642 -353 * 437 244 40 40 chr10 109065811 109065987 -31250778 - L2 LINE L2 -5 3308 3133 1045 224 27 27 chr10 109066698 109066909 -31249856 - L1M4 LINE L1 -1302 4844 4631 1860 130 6 67 chr10 109066909 109067224 -31249541 - AluSx SINE Alu -16 296 1 1045 224 27 27 chr10 109067224 109067306 -31249459 - L1M4 LINE L1 -1514 4632 4551 1511 119 53 32 chr10 109067477 109067762 -31249003 - L1MB5 LINE L1 0 6174 5884 1727 215 71 7 chr10 109067771 109068208 -31248557 - L1M4 LINE L1 -1518 4628 4164 11208 203 62 32 chr10 109068229 109069091 -31247674 - L1MA8 LINE L1 -2 6787 5952 1667 225 31 6 chr10 109069091 109069447 -31247318 + MLT1A1 LTR MaLR 1 365 0 11208 203 62 32 chr10 109069447 109074948 -31241817 - L1MA8 LINE L1 -837 5952 186 1604 107 5 0 chr10 109074948 109075154 -31241611 + AluSx SINE Alu 1 207 -105 348 89 0 0 chr10 109075154 109075199 -31241566 + AluSx SINE Alu 250 294 -8 244 358 13 13 chr10 109075231 109075382 -31241383 - L1M4 LINE L1 -6382 160 10 * 327 209 0 104 chr10 109075381 109075496 -31241269 - L1ME3A LINE L1 0 6170 6068 22 0 0 0 chr10 109075501 109075523 -31241242 + AT_rich Low_complexity Low_complexity 1 22 0 180 304 0 0 chr10 109076110 109076156 -31240609 + MIR SINE MIR 104 149 -113 209 133 67 0 chr10 109078032 109078077 -31238688 + GA-rich Low_complexity Low_complexity 2 49 0 1891 172 24 50 chr10 109078086 109078469 -31238296 + MLT1B LTR MaLR 18 390 0 221 260 0 20 chr10 109079464 109079514 -31237251 + L2 LINE L2 3223 3271 -1 1786 162 45 0 chr10 109079920 109080210 -31236555 - AluJo SINE Alu -9 303 1 222 158 0 0 chr10 109080262 109080300 -31236465 - L2 LINE L2 -13 3300 3263 380 262 81 58 chr10 109081661 109081784 -31234981 + MER5B DNA MER1_type 2 132 -46 393 58 0 0 chr10 109081784 109081836 -31234929 + (TG)n Simple_repeat Simple_repeat 2 53 0 380 262 81 58 chr10 109081836 109081884 -31234881 + MER5B DNA MER1_type 132 177 -1 2111 122 30 0 chr10 109082146 109082449 -31234316 + AluSx SINE Alu 1 312 0 207 184 0 0 chr10 109082517 109082555 -31234210 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 373 338 155 12 chr10 109083736 109084239 -31232526 - L2 LINE L2 -506 2808 2234 320 336 114 0 chr10 109084257 109084397 -31232368 - MIR SINE MIR -71 191 36 293 247 62 21 chr10 109084796 109084893 -31231872 + MER117 DNA MER1_type 97 197 0 2310 111 33 28 chr10 109085596 109085958 -31230807 + THE1B LTR MaLR 1 364 0 686 88 13 3 chr10 109087214 109087452 -31229313 + AluY SINE Alu 1 307 -4 382 244 16 31 chr10 109087548 109087675 -31229090 - L1MB8 LINE L1 0 6178 6054 333 364 0 0 chr10 109087857 109088022 -31228743 - MIR SINE MIR -15 247 83 295 107 18 36 chr10 109089158 109089214 -31227551 - MLT1K LTR MaLR -18 570 516 216 0 0 0 chr10 109089845 109089869 -31226896 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 336 48 0 0 chr10 109089868 109089910 -31226855 + (CA)n Simple_repeat Simple_repeat 1 42 0 372 204 97 10 chr10 109089930 109090033 -31226732 - L2 LINE L2 -4 3309 3198 1689 169 41 78 chr10 109090226 109090643 -31226122 + Charlie1b DNA MER1_type 77 477 -2284 2009 130 18 0 chr10 109090643 109090927 -31225838 + AluSx SINE Alu 1 289 -23 1689 169 41 78 chr10 109090927 109090972 -31225793 + Charlie1b DNA MER1_type 477 522 -1 417 263 152 58 chr10 109091018 109091379 -31225386 - LTR67 LTR ERVL -55 502 108 203 328 0 31 chr10 109091745 109091809 -31224956 + MIR SINE MIR 3 64 -198 262 246 16 0 chr10 109092740 109092801 -31223964 - MER103 DNA DNA -9 157 96 2055 136 11 0 chr10 109092806 109093093 -31223672 + AluSx SINE Alu 1 290 -22 21 36 0 0 chr10 109093093 109093121 -31223644 + AT_rich Low_complexity Low_complexity 1 28 0 2222 223 44 13 chr10 109093190 109093715 -31223050 - L1ME1 LINE L1 -4 6162 5622 393 248 138 38 chr10 109094824 109095047 -31221718 + MIR SINE MIR 9 250 -12 268 346 24 8 chr10 109095210 109095337 -31221428 - L3 LINE CR1 -2 1575 1447 430 267 149 0 chr10 109095364 109095525 -31221240 + MIR SINE MIR 65 249 -13 211 245 0 20 chr10 109095937 109095986 -31220779 - MER5A DNA MER1_type -92 97 50 484 307 26 21 chr10 109095995 109096184 -31220581 + MIR3 SINE MIR 16 205 -3 207 100 0 0 chr10 109096551 109096581 -31220184 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 556 326 92 24 chr10 109096621 109097252 -31219513 - L2 LINE L2 -75 3238 2564 25 65 0 0 chr10 109097675 109097721 -31219044 + AT_rich Low_complexity Low_complexity 1 46 0 1889 157 0 10 chr10 109097810 109098103 -31218662 + AluJo SINE Alu 1 290 -22 247 148 209 35 chr10 109098166 109098281 -31218484 - L1 LINE L1 -2542 3604 3470 468 221 0 11 chr10 109098835 109098930 -31217835 - MER117 DNA MER1_type -103 94 1 2053 137 0 10 chr10 109099382 109099682 -31217083 + AluSq SINE Alu 1 297 -16 275 314 0 0 chr10 109100012 109100082 -31216683 - MIR SINE MIR -61 147 78 202 267 80 13 chr10 109100575 109100650 -31216115 + MIR SINE MIR 59 138 -70 2295 105 0 0 chr10 109101055 109101350 -31215415 - AluSg SINE Alu -15 295 1 532 318 35 5 chr10 109103096 109103294 -31213471 + MIR SINE MIR 31 234 -28 670 276 105 18 chr10 109103341 109103569 -31213196 + MIR SINE MIR 12 259 -3 288 211 14 14 chr10 109103931 109104002 -31212763 - MER94 DNA DNA -56 78 8 553 284 30 52 chr10 109104722 109104954 -31211811 - MIR SINE MIR -21 241 15 426 261 9 9 chr10 109104987 109105102 -31211663 - MIR SINE MIR -129 133 19 429 298 44 26 chr10 109106271 109106499 -31210266 - L2 LINE L2 -2 3311 3080 595 293 93 31 chr10 109107359 109107376 -31209389 - L3 LINE CR1 -270 1307 1292 1027 234 126 83 chr10 109107376 109107907 -31208858 - MLT1H1 LTR MaLR -1 554 1 595 293 93 31 chr10 109107907 109108244 -31208521 - L3 LINE CR1 -285 1292 931 284 267 67 9 chr10 109108271 109108376 -31208389 - L1ME4a LINE L1 -33 6088 5978 782 311 160 27 chr10 109108462 109109095 -31207670 - L3 LINE CR1 -591 986 270 745 269 99 78 chr10 109109560 109109995 -31206770 - MLT1K LTR MaLR 0 588 145 363 245 102 66 chr10 109110064 109110260 -31206505 - LTR33A LTR ERVL -276 247 45 1917 139 68 6 chr10 109110464 109110787 -31205978 + MER61A LTR ERV1 1 343 0 2409 145 38 44 chr10 109110787 109111467 -31205298 + HUERS-P3b LTR ERV1 1 783 -4434 * 25533 89 32 17 chr10 109111456 109115208 -31201557 + HUERS-P3b LTR ERV1 1320 5217 0 1934 132 62 6 chr10 109115208 109115533 -31201232 + MER61A LTR ERV1 1 343 0 464 282 86 68 chr10 109116136 109116373 -31200392 + Charlie8 DNA MER1_type 2 246 -95 2214 101 24 0 chr10 109116373 109116661 -31200104 + AluSg SINE Alu 1 295 -15 464 282 86 68 chr10 109116661 109116703 -31200062 + Charlie8 DNA MER1_type 246 286 -55 242 171 0 0 chr10 109117280 109117321 -31199444 - MLT2B1 LTR ERVL -1 519 479 562 80 0 30 chr10 109117327 109117427 -31199338 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 1408 183 51 39 chr10 109117435 109117768 -31198997 - MLT2B1 LTR ERVL -182 338 2 381 244 35 17 chr10 109118836 109118951 -31197814 - MER103 DNA DNA -35 131 15 526 217 155 26 chr10 109119559 109119997 -31196768 - MLT1F LTR MaLR -4 538 1 458 280 21 14 chr10 109120058 109120201 -31196564 - MIR SINE MIR -70 192 49 374 290 127 40 chr10 109120652 109121030 -31195735 + LTR16A1 LTR ERVL 68 457 0 1496 203 25 0 chr10 109121450 109121770 -31194995 + AluJo SINE Alu 15 341 0 269 273 0 15 chr10 109121801 109121867 -31194898 + MIR SINE MIR 28 92 -116 423 0 0 0 chr10 109122769 109122816 -31193949 + (TG)n Simple_repeat Simple_repeat 2 48 0 480 324 9 26 chr10 109123164 109123411 -31193354 + MIR SINE MIR 23 262 0 348 259 26 0 chr10 109123896 109124012 -31192753 - MIR SINE MIR -13 249 131 6169 198 81 43 chr10 109124278 109125818 -31190947 + L1MD1 LINE L1 27 1623 -4917 483 186 99 42 chr10 109125802 109125979 -31190786 + L1MA9 LINE L1 6156 6311 -1 * 660 203 59 100 chr10 109126046 109126128 -31190637 + L1MD1 LINE L1 1647 1731 -4809 1740 164 36 30 chr10 109126128 109126432 -31190333 - AluJo SINE Alu -6 306 1 660 203 59 100 chr10 109126432 109126639 -31190126 + L1MD1 LINE L1 1731 1924 -4616 * 789 161 50 0 chr10 109126638 109126918 -31189847 + L1MA7 LINE L1 5881 6280 -11 9819 215 40 29 chr10 109126942 109128940 -31187825 + L1MD1 LINE L1 1913 3887 -2749 1980 81 0 16 chr10 109128940 109129210 -31187555 + AluSc SINE Alu 38 303 0 9819 215 40 29 chr10 109129210 109130777 -31185988 + L1MD1 LINE L1 3887 5538 -1098 2161 94 3 24 chr10 109130777 109131092 -31185673 - AluY SINE Alu 0 309 1 9819 215 40 29 chr10 109131092 109132150 -31184615 + L1MD1 LINE L1 5538 6583 -53 331 54 71 0 chr10 109132150 109132206 -31184559 + T-rich Low_complexity Low_complexity 5 64 0 1749 177 6 22 chr10 109132217 109132533 -31184232 - AluJo SINE Alu -1 311 1 361 119 0 0 chr10 109132539 109132598 -31184167 + L1MD2 LINE L1 6297 6355 -4 448 260 0 0 chr10 109132743 109132843 -31183922 + MER94 DNA DNA 1 100 -34 641 268 108 13 chr10 109133922 109134153 -31182612 - MIR SINE MIR -2 260 8 352 319 92 25 chr10 109135170 109135333 -31181432 + LTR16B LTR ERVL 54 227 -237 268 207 174 74 chr10 109136009 109136130 -31180635 + MIR SINE MIR 44 176 -86 763 315 34 0 chr10 109136149 109136387 -31180378 - MIR SINE MIR -4 258 13 691 234 241 80 chr10 109136960 109137361 -31179404 + LTR67 LTR ERVL 2 494 -63 2248 125 0 3 chr10 109137361 109137674 -31179091 - AluSx SINE Alu 0 312 1 691 234 241 80 chr10 109137674 109137750 -31179015 + LTR67 LTR ERVL 494 556 -1 364 227 0 0 chr10 109137897 109137972 -31178793 - L2 LINE L2 -17 3255 3181 2215 101 0 55 chr10 109138450 109138778 -31177987 + AluSx SINE Alu 1 310 -2 405 70 0 0 chr10 109138879 109138936 -31177829 + (TG)n Simple_repeat Simple_repeat 1 57 0 215 139 28 0 chr10 109139334 109139370 -31177395 + (ATG)n Simple_repeat Simple_repeat 2 38 0 371 299 35 80 chr10 109139495 109139671 -31177094 - L2 LINE L2 -466 2848 2691 1239 188 71 26 chr10 109139671 109139979 -31176786 + MER33 DNA MER1_type 1 322 -2 371 299 35 80 chr10 109139979 109140116 -31176649 - L2 LINE L2 -623 2691 2549 311 325 32 6 chr10 109141706 109141863 -31174902 + CT-rich Low_complexity Low_complexity 2 162 0 191 36 36 0 chr10 109144715 109144743 -31172022 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 324 0 0 0 chr10 109146055 109146091 -31170674 + (TG)n Simple_repeat Simple_repeat 2 37 0 206 208 21 21 chr10 109149298 109149346 -31167419 + L2 LINE L2 3265 3312 -1 291 316 10 0 chr10 109150528 109150626 -31166139 - MIR3 SINE MIR 0 208 110 913 214 40 44 chr10 109151547 109151795 -31164970 + MIR SINE MIR 10 256 -6 348 317 30 0 chr10 109151827 109151928 -31164837 - MIR SINE MIR -61 147 44 321 299 162 0 chr10 109153633 109153750 -31163015 + MIR SINE MIR 85 220 -42 1702 94 21 70 chr10 109153780 109154067 -31162698 + AluSx SINE Alu 24 296 -16 885 263 58 39 chr10 109154130 109154389 -31162376 + LTR16C LTR ERVL 58 321 -170 315 0 0 0 chr10 109154405 109154440 -31162325 + (TG)n Simple_repeat Simple_repeat 2 36 0 261 334 0 4 chr10 109154583 109154665 -31162100 + MIR SINE MIR 72 152 -56 249 289 168 29 chr10 109155687 109155860 -31160905 - HAL1 LINE L1 -629 1878 1682 442 226 28 0 chr10 109155861 109155967 -31160798 - MER94 DNA DNA -23 111 3 22 0 0 0 chr10 109155989 109156011 -31160754 + AT_rich Low_complexity Low_complexity 1 22 0 6380 87 11 3 chr10 109156011 109156901 -31159864 - L1MA2 LINE L1 -4 6300 5404 261 298 58 0 chr10 109156924 109157028 -31159737 - HAL1 LINE L1 -854 1653 1544 2008 120 17 0 chr10 109157316 109157607 -31159158 + AluSx SINE Alu 1 296 -16 1184 159 88 4 chr10 109157614 109157865 -31158900 - L1PA14 LINE L1 -2 6159 5888 21 36 0 0 chr10 109157865 109157893 -31158872 + AT_rich Low_complexity Low_complexity 1 28 0 2667 143 22 12 chr10 109157910 109158322 -31158443 + MSTA LTR MaLR 1 416 -12 243 267 197 69 chr10 109158655 109158806 -31157959 - L2 LINE L2 -385 2929 2799 1649 152 32 48 chr10 109158806 109159122 -31157643 + AluJb SINE Alu 1 311 -1 243 267 197 69 chr10 109159122 109159330 -31157435 - L2 LINE L2 -515 2799 2524 836 287 44 41 chr10 109159330 109159692 -31157073 + MLT1H LTR MaLR 5 367 -182 446 99 14 28 chr10 109160869 109160940 -31155825 - AluSq SINE Alu -19 294 225 806 160 0 0 chr10 109160955 109161086 -31155679 - AluSq SINE Alu -182 131 1 213 39 0 0 chr10 109161160 109161186 -31155579 + (ATG)n Simple_repeat Simple_repeat 2 27 0 246 70 0 53 chr10 109161261 109161318 -31155447 + (TTTTTG)n Simple_repeat Simple_repeat 5 58 0 184 296 28 14 chr10 109161358 109161429 -31155336 + MIR SINE MIR 72 143 -119 240 353 102 6 chr10 109161699 109161866 -31154899 - MIR3 SINE MIR -21 187 5 465 299 114 10 chr10 109161985 109162186 -31154579 + MIR SINE MIR 14 235 -27 256 145 66 26 chr10 109163245 109163321 -31153444 - L1MB4 LINE L1 0 6180 6102 405 39 0 0 chr10 109163913 109163964 -31152801 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 544 319 71 6 chr10 109164167 109164349 -31152416 - MIR SINE MIR -8 254 61 668 338 8 8 chr10 109164527 109164767 -31151998 - MIR SINE MIR 0 262 23 222 280 68 53 chr10 109165326 109165458 -31151307 - MIR3 SINE MIR -52 156 23 306 302 0 0 chr10 109165827 109165890 -31150875 - L3 LINE CR1 -19 1558 1496 357 229 73 28 chr10 109166798 109166907 -31149858 - MIR3 SINE MIR -14 194 81 1322 157 0 5 chr10 109168996 109169213 -31147552 - AluJo SINE Alu -15 297 82 341 175 0 0 chr10 109169274 109169331 -31147434 - MIR SINE MIR -147 115 59 226 0 59 0 chr10 109169382 109169416 -31147349 + (GA)n Simple_repeat Simple_repeat 1 36 0 186 133 0 0 chr10 109170537 109170567 -31146198 + (TG)n Simple_repeat Simple_repeat 1 30 0 581 301 22 35 chr10 109170772 109171001 -31145764 + MIR SINE MIR 6 231 -31 323 231 51 68 chr10 109171432 109171549 -31145216 + MIR3 SINE MIR 64 178 -30 5504 189 55 6 chr10 109171608 109173709 -31143056 - L1MB3 LINE L1 0 6183 3975 930 145 7 0 chr10 109173714 109173866 -31142899 - AluSg/x SINE Alu -3 309 157 260 253 40 0 chr10 109175665 109175740 -31141025 + MIR SINE MIR 184 261 -1 222 258 233 17 chr10 109175940 109176060 -31140705 + L2 LINE L2 3127 3272 0 673 282 53 13 chr10 109176239 109176466 -31140299 + L3 LINE CR1 1145 1380 -197 224 323 141 32 chr10 109177448 109177668 -31139097 - L2 LINE L2 0 3272 3029 1133 213 13 29 chr10 109177831 109178070 -31138695 + MIR SINE MIR 28 262 0 183 324 54 0 chr10 109178903 109178977 -31137788 + MIR3 SINE MIR 82 159 -49 * 907 267 131 8 chr10 109178972 109179389 -31137376 + L2 LINE L2 2764 3235 -78 240 204 130 0 chr10 109179595 109179649 -31137116 + L2 LINE L2 3253 3313 0 * 507 283 109 13 chr10 109179628 109179858 -31136907 + MIR SINE MIR 11 262 0 242 300 92 42 chr10 109181047 109181167 -31135598 - L2 LINE L2 -2 3311 3186 387 306 113 0 chr10 109181366 109181526 -31135239 + MIR SINE MIR 60 237 -25 231 282 71 12 chr10 109181679 109181764 -31135001 - L2 LINE L2 -16 3256 3167 420 310 0 21 chr10 109181829 109181974 -31134791 + MIR SINE MIR 66 207 -55 1821 176 0 0 chr10 109182011 109182349 -31134416 - AluSx SINE Alu 0 338 1 415 271 199 0 chr10 109182964 109183115 -31133650 - MER20B DNA MER1_type -599 184 4 831 179 0 0 chr10 109184060 109184392 -31132373 + (TCCA)n Simple_repeat Simple_repeat 1 332 0 667 265 113 9 chr10 109184962 109185192 -31131573 + MIR SINE MIR 8 261 -1 396 129 0 0 chr10 109185309 109185371 -31131394 + MER53 DNA DNA 128 189 0 246 254 25 25 chr10 109185836 109185930 -31130835 + CT-rich Low_complexity Low_complexity 3 161 0 370 287 85 88 chr10 109186295 109186686 -31130079 + L2 LINE L2 2781 3169 -103 499 272 111 64 chr10 109186700 109186998 -31129767 + L2 LINE L2 2916 3227 -45 507 248 85 7 chr10 109187610 109187751 -31129014 - MIR3 SINE MIR -15 193 42 1245 174 14 5 chr10 109188965 109189183 -31127582 - AluJo SINE Alu -6 306 87 363 43 0 0 chr10 109189681 109189727 -31127038 + MADE1 DNA Mariner 35 80 0 200 215 92 31 chr10 109189734 109189799 -31126966 + L2 LINE L2 3241 3309 -4 455 229 121 36 chr10 109190088 109190254 -31126511 - MER5A DNA MER1_type -8 181 2 312 300 20 0 chr10 109191095 109191195 -31125570 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 2314 75 0 3 chr10 109191416 109191722 -31125043 + AluSc SINE Alu 3 307 -2 191 240 100 0 chr10 109192081 109192131 -31124634 - L2 LINE L2 -3 3310 3256 23 0 0 0 chr10 109192672 109192695 -31124070 + AT_rich Low_complexity Low_complexity 1 23 0 268 350 117 12 chr10 109192970 109193133 -31123632 - L2 LINE L2 -224 3048 2869 687 162 0 9 chr10 109193448 109193559 -31123206 + FLAM_C SINE Alu 5 114 -29 819 301 123 22 chr10 109243563 109243969 -31072796 + L2 LINE L2 2867 3313 0 225 333 33 11 chr10 109243977 109244067 -31072698 + MIR SINE MIR 169 260 -2 698 277 67 0 chr10 109245351 109245546 -31071219 + MER63A DNA MER1_type 3 210 0 1398 192 78 36 chr10 109245649 109246009 -31070756 + THE1C LTR MaLR 1 375 0 446 305 37 6 chr10 109247561 109247725 -31069040 + MIR SINE MIR 47 215 -47 852 261 62 48 chr10 109248851 109249123 -31067642 + AluJo SINE Alu 2 277 -35 377 306 15 56 chr10 109249390 109249586 -31067179 + MER5A DNA MER1_type 1 188 -1 249 265 60 0 chr10 109251069 109251152 -31065613 + MIR3 SINE MIR 83 170 -38 273 333 21 0 chr10 109251250 109251343 -31065422 + L3 LINE CR1 1395 1489 -88 243 293 75 53 chr10 109251373 109251506 -31065259 - MER5A DNA MER1_type -46 143 8 214 363 55 7 chr10 109252605 109252751 -31064014 + L2 LINE L2 3161 3313 0 329 199 73 134 chr10 109252827 109253073 -31063692 - L1ME4a LINE L1 0 6121 5891 263 230 11 0 chr10 109253087 109253174 -31063591 + (TA)n Simple_repeat Simple_repeat 2 89 0 2222 139 0 29 chr10 109253214 109253560 -31063205 + MER1B DNA MER1_type 2 337 0 497 16 0 16 chr10 109253578 109253641 -31063124 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 354 196 203 63 chr10 109253686 109253844 -31062921 - L1ME4a LINE L1 -347 5774 5595 1834 176 120 28 chr10 109254150 109254616 -31062149 - L1MDa LINE L1 -5183 1357 849 237 254 35 79 chr10 109255414 109255528 -31061237 - MIR SINE MIR -50 212 104 186 338 88 0 chr10 109255774 109255842 -31060923 - L2 LINE L2 -3 3310 3237 290 176 88 0 chr10 109256422 109256490 -31060275 - MIR SINE MIR -65 197 124 527 293 29 11 chr10 109256889 109257063 -31059702 - MIR SINE MIR -70 192 16 2941 196 3 30 chr10 109257814 109258417 -31058348 - L1MA10 LINE L1 -21 6313 5727 2508 117 16 43 chr10 109258481 109258542 -31058223 - L1MA7 LINE L1 -6 6285 6224 2583 54 0 0 chr10 109258542 109258839 -31057926 - AluY SINE Alu -9 302 6 2508 117 16 43 chr10 109258839 109259223 -31057542 - L1MA7 LINE L1 -67 6224 5852 381 229 196 5 chr10 109259280 109259483 -31057282 - MIR SINE MIR -11 251 13 254 188 21 0 chr10 109260126 109260174 -31056591 + L2 LINE L2 3204 3252 -20 797 193 39 24 chr10 109260279 109260486 -31056279 + MIR SINE MIR 48 257 -5 2186 124 0 0 chr10 109260980 109261278 -31055487 + AluSx SINE Alu 2 299 -13 378 0 0 0 chr10 109261635 109261677 -31055088 + (TG)n Simple_repeat Simple_repeat 2 43 0 333 350 46 9 chr10 109261925 109262142 -31054623 - MIR SINE MIR -14 248 24 390 366 44 4 chr10 109262412 109262639 -31054126 + L3 LINE CR1 1218 1453 -124 238 258 0 0 chr10 109262773 109262835 -31053930 - L2 LINE L2 -652 2662 2601 270 257 128 0 chr10 109262941 109263050 -31053715 + MIR3 SINE MIR 76 198 -10 405 0 0 0 chr10 109263271 109263316 -31053449 + (TA)n Simple_repeat Simple_repeat 1 45 0 706 138 0 9 chr10 109263388 109263497 -31053268 - AluSg/x SINE Alu -19 291 184 21 36 0 0 chr10 109263708 109263736 -31053029 + AT_rich Low_complexity Low_complexity 1 28 0 389 366 44 4 chr10 109263810 109264037 -31052728 + L3 LINE CR1 1218 1453 -124 238 258 0 0 chr10 109264171 109264233 -31052532 - L2 LINE L2 -652 2662 2601 405 0 0 0 chr10 109264668 109264713 -31052052 + (TA)n Simple_repeat Simple_repeat 2 46 0 2165 112 3 7 chr10 109264785 109265079 -31051686 - AluSx SINE Alu -19 293 1 767 220 3 19 chr10 109265763 109266129 -31050636 + CT-rich Low_complexity Low_complexity 1 359 0 242 281 44 35 chr10 109266166 109266280 -31050485 - MIR SINE MIR -127 135 21 424 81 27 14 chr10 109266734 109266808 -31049957 + (TTCC)n Simple_repeat Simple_repeat 2 76 0 370 348 30 12 chr10 109267566 109267730 -31049035 - MER5A DNA MER1_type -13 176 10 319 246 123 15 chr10 109268593 109268723 -31048042 + MIR SINE MIR 63 206 -56 181 292 153 0 chr10 109268911 109268983 -31047782 - L2 LINE L2 -2 3311 3229 243 295 19 9 chr10 109269351 109269456 -31047309 - MLT1K LTR MaLR -42 546 441 572 215 99 0 chr10 109269559 109269680 -31047085 - MLT1G1 LTR MaLR -425 170 38 265 321 114 8 chr10 109270219 109270350 -31046415 + L2 LINE L2 3123 3267 -5 181 390 0 9 chr10 109271869 109271974 -31044791 + L2 LINE L2 2553 2656 -658 1787 208 48 68 chr10 109272102 109272617 -31044148 + MLT1D LTR MaLR 1 505 0 192 356 59 17 chr10 109272769 109272887 -31043878 + L2 LINE L2 3127 3249 -23 233 280 0 0 chr10 109273010 109273060 -31043705 - L2 LINE L2 -39 3274 3225 373 263 134 6 chr10 109273631 109273810 -31042955 - MIR SINE MIR -24 238 37 184 349 108 16 chr10 109274083 109274212 -31042553 - L3b LINE CR1 -6 1577 1437 349 300 31 0 chr10 109274522 109274652 -31042113 + MIR SINE MIR 121 254 -8 6074 136 38 3 chr10 109274788 109275761 -31041004 - Tigger1 DNA MER2_type -5 2413 1407 6401 140 23 17 chr10 109275861 109276900 -31039865 - Tigger1 DNA MER2_type -1367 1051 7 181 352 47 81 chr10 109277347 109277645 -31039120 - L2 LINE L2 -68 3204 2917 453 285 17 41 chr10 109277864 109278036 -31038729 + L2 LINE L2 1911 2078 -1236 2783 90 0 0 chr10 109278056 109278433 -31038332 - L1PA8 LINE L1 0 6172 5796 1806 151 0 66 chr10 109278985 109279304 -31037461 - AluJb SINE Alu -14 298 1 2937 157 23 0 chr10 109279551 109280028 -31036737 - LTR42 LTR ERVL 0 495 8 2222 292 105 51 chr10 109280126 109280608 -31036157 - ERVL LTR ERVL -361 5403 4948 1971 145 0 0 chr10 109280608 109280926 -31035839 + AluSq SINE Alu 1 318 0 2222 292 105 51 chr10 109280926 109281793 -31034972 - ERVL LTR ERVL -816 4948 3980 2318 268 84 60 chr10 109281799 109282998 -31033767 + L2 LINE L2 2086 3313 0 205 194 0 0 chr10 109286219 109286255 -31030510 - L2 LINE L2 -21 3251 3216 206 286 95 12 chr10 109286286 109286370 -31030395 - MIR SINE MIR -152 110 20 252 295 166 7 chr10 109286413 109286552 -31030213 + MER5A DNA MER1_type 26 186 -3 222 62 0 0 chr10 109287406 109287438 -31029327 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr10 109289214 109289239 -31027526 + (T)n Simple_repeat Simple_repeat 1 25 0 2424 171 33 18 chr10 109291079 109291536 -31025229 + MLT1C LTR MaLR 4 467 0 249 266 73 42 chr10 109292153 109292345 -31024420 - L2 LINE L2 -238 3034 2837 721 272 67 0 chr10 109294400 109294595 -31022170 + MER63A DNA MER1_type 3 210 0 561 266 11 43 chr10 109294658 109294698 -31022067 - MER5B DNA MER1_type 0 178 138 1715 156 81 39 chr10 109294698 109295058 -31021707 + THE1C LTR MaLR 1 375 0 561 266 11 43 chr10 109295058 109295201 -31021564 - MER5B DNA MER1_type -40 138 1 713 162 168 36 chr10 109295228 109295395 -31021370 + MER5A DNA MER1_type 1 189 0 1690 148 67 57 chr10 109295854 109296225 -31020540 + THE1C LTR MaLR 1 375 0 454 248 163 0 chr10 109296388 109296541 -31020224 - MER5A DNA MER1_type -3 186 9 417 200 131 14 chr10 109297017 109297162 -31019603 + MER117 DNA MER1_type 2 163 -34 413 197 84 49 chr10 109297562 109297704 -31019061 + MIR SINE MIR 110 256 -6 22 0 0 0 chr10 109297834 109297856 -31018909 + AT_rich Low_complexity Low_complexity 1 22 0 816 237 71 5 chr10 109297874 109298085 -31018680 - MIR SINE MIR -32 230 6 376 272 114 19 chr10 109298570 109298728 -31018037 + L2 LINE L2 3098 3270 -2 1840 185 0 29 chr10 109299934 109300280 -31016485 + MER1B DNA MER1_type 2 337 0 473 0 0 17 chr10 109300298 109300356 -31016409 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 304 193 221 69 chr10 109300419 109300564 -31016201 - L1ME LINE L1 -360 5761 5595 687 316 162 24 chr10 109301364 109301952 -31014813 + L3 LINE CR1 228 896 -681 430 260 68 31 chr10 109302137 109302329 -31014436 + MIR SINE MIR 55 253 -9 494 272 133 0 chr10 109302456 109302651 -31014114 - MIR SINE MIR -34 228 8 1983 134 66 17 chr10 109302878 109303228 -31013537 - THE1C LTR MaLR 0 375 9 244 271 256 0 chr10 109304183 109304316 -31012449 + MIR SINE MIR 26 192 -70 1128 171 9 46 chr10 109305629 109305846 -31010919 - AluJo SINE Alu -13 299 91 265 314 132 6 chr10 109307049 109307208 -31009557 + MIR SINE MIR 34 212 -50 189 0 0 0 chr10 109307733 109307754 -31009011 + (T)n Simple_repeat Simple_repeat 1 21 0 7633 27 24 0 chr10 109309057 109310563 -31006202 - L1PA3 LINE L1 0 6155 4629 180 0 0 0 chr10 109313233 109313253 -31003512 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1443 199 0 32 chr10 109313256 109313537 -31003228 - AluJo SINE Alu -30 282 11 637 195 50 6 chr10 109313692 109313851 -31002914 - L1MDa LINE L1 -4860 1680 1515 1320 186 0 51 chr10 109313954 109314228 -31002537 + AluJb SINE Alu 52 311 -1 859 190 58 70 chr10 109314228 109314470 -31002295 - MER33 DNA MER1_type -85 239 1 516 175 10 0 chr10 109314489 109314586 -31002179 + MER5A DNA MER1_type 9 106 -83 218 292 123 41 chr10 109315936 109316155 -31000610 + L2 LINE L2 2817 3053 -219 729 202 42 29 chr10 109316718 109316923 -30999842 - MER63 DNA MER1_type 0 1688 1 327 200 0 0 chr10 109317004 109317069 -30999696 + MIR SINE MIR 80 144 -118 464 216 10 0 chr10 109317237 109317334 -30999431 + MER5A DNA MER1_type 9 106 -83 489 236 20 47 chr10 109318103 109318251 -30998514 + MIR3 SINE MIR 62 205 -3 393 330 65 22 chr10 109318499 109318729 -30998036 + MIR SINE MIR 23 262 0 252 341 0 0 chr10 109320544 109320626 -30996139 - MIR3 SINE MIR -24 184 103 1145 148 53 14 chr10 109320888 109321097 -30995668 + MER20 DNA MER1_type 3 219 0 1852 161 45 0 chr10 109321287 109321623 -30995142 + L1MA4 LINE L1 5946 6296 -4 492 294 33 8 chr10 109321773 109321972 -30994793 + MIR SINE MIR 40 243 -19 336 211 42 0 chr10 109322193 109322264 -30994501 + MLT1D LTR MaLR 18 91 -414 1654 221 81 12 chr10 109322264 109322685 -30994080 + MLT1D LTR MaLR 55 504 -1 273 250 28 0 chr10 109324588 109324660 -30992105 - MIR SINE MIR -139 123 50 299 271 174 7 chr10 109325867 109326022 -30990743 - L3 LINE CR1 -45 1532 1352 * 331 322 23 58 chr10 109326019 109326193 -30990572 + MIR3 SINE MIR 9 176 -32 187 227 45 0 chr10 109326356 109326400 -30990365 + MIR3 SINE MIR 153 198 -10 2043 136 23 0 chr10 109326818 109327119 -30989646 + AluSx SINE Alu 1 308 -4 625 211 19 13 chr10 109327317 109327473 -30989292 - MER103 DNA DNA -2 164 8 1282 140 5 32 chr10 109327557 109327778 -30988987 + MER20 DNA MER1_type 1 215 -4 4422 29 0 10 chr10 109328270 109328968 -30987797 + SVA Other Other 722 1386 0 216 229 84 96 chr10 109329501 109329584 -30987181 - L2 LINE L2 0 3313 3232 2037 132 16 7 chr10 109329643 109329990 -30986775 + AluSq SINE Alu 7 313 0 620 280 35 35 chr10 109331591 109331848 -30984917 + L1MC4a LINE L1 5686 5942 -1866 216 204 0 20 chr10 109333004 109333053 -30983712 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 230 328 11 118 chr10 109333874 109334060 -30982705 + L2 LINE L2 3018 3183 -89 184 200 0 120 chr10 109334233 109334283 -30982482 - MIR3 SINE MIR -50 158 115 203 290 0 0 chr10 109336623 109336682 -30980083 - MIR SINE MIR -109 99 41 208 347 47 28 chr10 109337083 109337296 -30979469 - L2 LINE L2 -930 2384 2168 462 36 0 0 chr10 109337972 109338028 -30978737 + (GA)n Simple_repeat Simple_repeat 1 56 0 2706 237 80 7 chr10 109338361 109339075 -30977690 - MER20B DNA MER1_type -16 767 2 1247 259 41 39 chr10 109339657 109340116 -30976649 - MER113 DNA MER1_type? -61 460 1 241 254 34 0 chr10 109341002 109341061 -30975704 - MIR SINE MIR -149 113 53 289 247 49 12 chr10 109341268 109341349 -30975416 + MER5A DNA MER1_type 65 148 -41 181 265 137 29 chr10 109341271 109341373 -30975392 - MER5A DNA MER1_type -56 133 21 * 408 229 0 2 chr10 109341824 109341922 -30974843 + L1MC1 LINE L1 5426 5522 -811 6686 63 16 17 chr10 109342022 109342889 -30973876 + L1PA7 LINE L1 5257 6124 -30 2407 78 0 3 chr10 109342889 109343183 -30973582 - AluY SINE Alu -18 293 1 6686 63 16 17 chr10 109343183 109343214 -30973551 + L1PA7 LINE L1 6124 6154 0 3349 148 40 36 chr10 109343214 109343881 -30972884 + L1MC1 LINE L1 5661 6333 0 532 265 0 7 chr10 109344314 109344450 -30972315 + MIR SINE MIR 37 171 -91 259 309 31 0 chr10 109344569 109344666 -30972099 + MIR SINE MIR 84 183 -79 689 282 133 65 chr10 109346097 109346540 -30970225 - MLT1J LTR MaLR -38 473 1 355 384 5 20 chr10 109347336 109347534 -30969231 - MIR SINE MIR -46 216 22 249 290 77 66 chr10 109347673 109347856 -30968909 - MIR SINE MIR -55 207 23 243 219 0 31 chr10 109349052 109349116 -30967649 + CT-rich Low_complexity Low_complexity 2 63 0 414 291 34 27 chr10 109349298 109349446 -30967319 - MIR SINE MIR -113 149 1 369 314 8 0 chr10 109349639 109349763 -30967002 + L1ME LINE L1 5533 5657 -464 261 180 0 0 chr10 109350390 109350440 -30966325 + (TG)n Simple_repeat Simple_repeat 1 50 0 217 359 87 49 chr10 109351454 109351822 -30964943 - L2 LINE L2 0 3272 2891 446 249 176 36 chr10 109351926 109352091 -30964674 - MIR SINE MIR -5 257 70 418 303 118 44 chr10 109352093 109352364 -30964401 - L2 LINE L2 -716 2598 2308 1345 242 116 18 chr10 109352401 109352859 -30963906 - MLT1H LTR MaLR -34 515 13 231 313 0 36 chr10 109352949 109353032 -30963733 - L2 LINE L2 -6 3266 3187 564 278 82 53 chr10 109353401 109353951 -30962814 - L1ME4a LINE L1 -1 6120 5555 183 161 0 0 chr10 109354064 109354095 -30962670 - L2 LINE L2 0 3272 3242 389 219 51 48 chr10 109354105 109354231 -30962534 + L1MC3 LINE L1 6039 6163 -1 194 356 98 26 chr10 109354419 109354613 -30962152 - L2 LINE L2 -61 3211 3004 471 246 31 31 chr10 109354627 109354757 -30962008 - MIR SINE MIR -70 192 63 480 252 9 0 chr10 109355098 109355209 -30961556 + L1PB4 LINE L1 6043 6154 -2 315 348 93 56 chr10 109356246 109356732 -30960033 + L2 LINE L2 2782 3271 -1 216 97 0 0 chr10 109357125 109357156 -30959609 + (T)n Simple_repeat Simple_repeat 1 31 0 361 259 84 123 chr10 109357654 109357963 -30958802 + L2 LINE L2 2924 3220 -52 237 228 35 0 chr10 109358222 109358279 -30958486 - L2 LINE L2 -86 3227 3169 1852 146 37 0 chr10 109358387 109358681 -30958084 + AluJb SINE Alu 1 305 -7 371 312 52 81 chr10 109359137 109359445 -30957320 - L1ME LINE L1 -323 5798 5500 317 263 132 18 chr10 109359913 109360027 -30956738 + MIR SINE MIR 50 176 -86 540 231 92 44 chr10 109360312 109360532 -30956233 + MIR SINE MIR 27 256 -6 266 305 42 11 chr10 109361211 109361306 -30955459 + MER5A DNA MER1_type 69 166 -23 305 254 77 62 chr10 109361318 109361448 -30955317 + MIR3 SINE MIR 27 158 -50 197 271 153 34 chr10 109361502 109361620 -30955145 - L2 LINE L2 -1 3312 3181 207 336 47 16 chr10 109361940 109362068 -30954697 - L2 LINE L2 -466 2848 2717 1279 279 25 40 chr10 109362135 109362605 -30954160 - LTR16B LTR ERVL 0 464 2 465 320 41 88 chr10 109362670 109363011 -30953754 + L2 LINE L2 2928 3252 -20 213 39 0 0 chr10 109363454 109363480 -30953285 + (TG)n Simple_repeat Simple_repeat 2 27 0 218 237 114 79 chr10 109365566 109365680 -30951085 + L3 LINE CR1 1457 1574 -3 1156 202 87 0 chr10 109365730 109365983 -30950782 + ORSL DNA AcHobo 1 275 0 281 325 0 0 chr10 109366983 109367066 -30949699 + MIR SINE MIR 30 112 -150 856 126 7 15 chr10 109367069 109367204 -30949561 - MLT1C LTR MaLR -2 465 332 609 232 40 33 chr10 109367209 109367360 -30949405 - MLT1C LTR MaLR -349 156 5 924 283 123 22 chr10 109367411 109367817 -30948948 + L2 LINE L2 2867 3313 0 224 322 33 11 chr10 109367825 109367915 -30948850 + MIR SINE MIR 169 260 -2 233 292 28 42 chr10 109370433 109370505 -30946260 + L2 LINE L2 3150 3220 -52 185 304 0 18 chr10 109371159 109371215 -30945550 - L2 LINE L2 -17 3296 3242 2248 113 0 3 chr10 109371535 109371844 -30944921 + AluSx SINE Alu 1 308 -4 654 298 15 15 chr10 109371914 109372112 -30944653 + MIR SINE MIR 11 208 -54 338 299 23 62 chr10 109372573 109372707 -30944058 - MER5A DNA MER1_type -3 186 59 1798 161 7 10 chr10 109372707 109373005 -30943760 + AluJb SINE Alu 1 297 -15 338 299 23 62 chr10 109373005 109373047 -30943718 - MER5A DNA MER1_type -130 59 17 323 333 187 0 chr10 109373059 109373182 -30943583 + MIR3 SINE MIR 42 187 -21 331 299 69 52 chr10 109374843 109375017 -30941748 - MER5A DNA MER1_type -1 188 12 2182 121 0 3 chr10 109375424 109375731 -30941034 + AluSg SINE Alu 1 306 -4 301 189 54 27 chr10 109375777 109375851 -30940914 - LTR67 LTR ERVL -10 547 472 2949 213 59 14 chr10 109376794 109377493 -30939272 - L1MD2 LINE L1 -2 6357 5628 1713 242 50 37 chr10 109377493 109378108 -30938657 - L1MD2 LINE L1 -1249 4897 4275 285 29 0 0 chr10 109378123 109378157 -30938608 + (TG)n Simple_repeat Simple_repeat 2 35 0 1862 167 0 7 chr10 109378157 109378444 -30938321 - AluJo SINE Alu -27 285 1 225 179 30 15 chr10 109378695 109378762 -30938003 + (TA)n Simple_repeat Simple_repeat 1 68 0 266 250 0 0 chr10 109379342 109379406 -30937359 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 581 254 150 26 chr10 109380139 109380486 -30936279 - L1ME4a LINE L1 -158 5963 5574 2411 78 0 0 chr10 109380503 109380799 -30935966 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 109380811 109380832 -30935933 + AT_rich Low_complexity Low_complexity 1 21 0 188 67 33 0 chr10 109380922 109380952 -30935813 + (TG)n Simple_repeat Simple_repeat 2 32 0 8179 29 0 0 chr10 109381118 109382460 -30934305 + L1PA3 LINE L1 4813 6154 -1 731 254 69 22 chr10 109382515 109382747 -30934018 - MIR SINE MIR -11 251 9 507 262 115 5 chr10 109383128 109383319 -30933446 + MIR SINE MIR 10 221 -41 2149 159 133 10 chr10 109383616 109384031 -30932734 - MLT1C LTR MaLR -1 466 1 315 270 132 46 chr10 109384181 109384355 -30932410 - L2 LINE L2 -429 2885 2697 225 250 130 46 chr10 109384896 109385004 -30931761 - MIR SINE MIR -65 197 81 384 294 48 115 chr10 109386665 109387101 -30929664 + L2 LINE L2 2876 3282 -31 285 313 54 18 chr10 109387251 109387363 -30929402 - MIR3 SINE MIR -40 168 53 233 315 49 42 chr10 109388356 109388499 -30928266 + MIR SINE MIR 48 191 -71 386 293 37 49 chr10 109388810 109388974 -30927791 - L2 LINE L2 0 3272 3111 222 37 0 0 chr10 109389032 109389059 -30927706 + (GGAGA)n Simple_repeat Simple_repeat 1 27 0 491 186 218 96 chr10 109389099 109389144 -30927621 + MER96 DNA MER1_type? 1 39 -136 2571 63 0 0 chr10 109389144 109389443 -30927322 - AluY SINE Alu -12 299 1 491 186 218 96 chr10 109389443 109389553 -30927212 + MER96 DNA MER1_type? 39 175 0 1965 237 53 11 chr10 109390438 109390894 -30925871 - ERVL-C2 LTR ERVL -5250 514 40 268 89 0 89 chr10 109390928 109390973 -30925792 - MLT2C2 LTR ERVL -7 457 417 1602 186 89 64 chr10 109391003 109391426 -30925339 - MLT2B1 LTR ERVL -40 480 1 522 265 6 31 chr10 109391738 109391900 -30924865 + MIR SINE MIR 95 252 -10 231 237 68 0 chr10 109392182 109392241 -30924524 - L2 LINE L2 0 3313 3251 364 303 30 15 chr10 109392952 109393084 -30923681 - MIR SINE MIR -19 243 110 183 391 16 0 chr10 109393100 109393164 -30923601 - L2 LINE L2 -250 3022 2958 243 297 66 0 chr10 109394090 109394181 -30922584 + MIR SINE MIR 56 152 -56 311 260 24 149 chr10 109394265 109394473 -30922292 - MER5A DNA MER1_type -7 182 1 189 154 0 0 chr10 109394808 109394847 -30921918 + (CA)n Simple_repeat Simple_repeat 2 40 0 642 148 15 15 chr10 109397510 109397645 -30919120 + CT-rich Low_complexity Low_complexity 2 136 0 1329 222 59 39 chr10 109397651 109397957 -30918808 - AluJb SINE Alu 0 312 1 430 325 12 44 chr10 109398954 109399203 -30917562 - L2 LINE L2 0 3313 3073 2038 215 53 30 chr10 109399910 109400402 -30916363 - MLT1D LTR MaLR 0 505 3 537 264 101 14 chr10 109400527 109400675 -30916090 - MER91A DNA MER1_type -35 161 1 423 283 23 24 chr10 109402554 109402732 -30914033 + MIR3 SINE MIR 12 188 -62 224 143 0 0 chr10 109403361 109403396 -30913369 - MIR SINE MIR -64 144 110 215 290 30 61 chr10 109406811 109406942 -30909823 - MIR SINE MIR -118 144 18 211 186 71 0 chr10 109407284 109407354 -30909411 + (TA)n Simple_repeat Simple_repeat 2 76 0 491 0 17 0 chr10 109407356 109407415 -30909350 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 202 380 37 27 chr10 109408044 109408231 -30908534 - L2 LINE L2 -222 3050 2862 22 0 0 0 chr10 109408760 109408782 -30907983 + GC_rich Low_complexity Low_complexity 1 22 0 3317 216 62 103 chr10 109409760 109411478 -30905287 - L1MEc LINE L1 -3661 2554 887 853 225 42 38 chr10 109411496 109411709 -30905056 - MER20 DNA MER1_type -5 214 1 2749 235 65 33 chr10 109411715 109412528 -30904237 - L1MEc LINE L1 -5521 875 37 425 294 24 16 chr10 109412535 109412661 -30904104 - MIR SINE MIR -62 146 20 2231 95 3 3 chr10 109413246 109413540 -30903225 + AluSx SINE Alu 1 294 -18 445 319 165 17 chr10 109413648 109413999 -30902766 + L2 LINE L2 2833 3235 -78 219 239 15 15 chr10 109415578 109415645 -30901120 + GA-rich Low_complexity Low_complexity 1 67 0 1669 232 18 3 chr10 109417407 109417743 -30899022 + MER58B DNA MER1_type 1 341 0 363 344 7 26 chr10 109418905 109419056 -30897709 + MIR SINE MIR 20 167 -95 344 280 0 11 chr10 109419078 109419171 -30897594 + L2 LINE L2 3221 3312 -1 1175 272 94 30 chr10 109419341 109419746 -30897019 + MLT1J2 LTR MaLR 1 431 -19 201 333 15 15 chr10 109419852 109419918 -30896847 + L2 LINE L2 3201 3266 -6 786 244 85 16 chr10 109420715 109420973 -30895792 + LTR16A1 LTR ERVL 180 455 -2 2069 102 0 18 chr10 109421416 109421700 -30895065 + AluSg SINE Alu 1 279 -31 796 290 28 24 chr10 109421957 109422212 -30894553 - MIR SINE MIR 0 262 7 221 268 70 28 chr10 109422254 109422325 -30894440 - L2 LINE L2 -2 3311 3238 362 237 0 0 chr10 109422813 109422889 -30893876 - MIR3 SINE MIR -12 196 121 453 343 36 0 chr10 109423546 109423731 -30893034 - MIR SINE MIR -52 210 19 446 316 184 0 chr10 109423860 109424072 -30892693 + MIR SINE MIR 9 259 -3 2320 208 13 25 chr10 109424435 109424960 -30891805 + Charlie1b DNA MER1_type 1 519 -4 904 271 67 39 chr10 109425078 109425514 -30891251 + L1ME4a LINE L1 5477 5924 -197 2450 75 0 0 chr10 109426002 109426307 -30890458 + AluY SINE Alu 1 305 -6 198 182 0 0 chr10 109427807 109427840 -30888925 - L2 LINE L2 -23 3249 3217 243 0 0 0 chr10 109429037 109429064 -30887701 + (TG)n Simple_repeat Simple_repeat 2 28 0 528 199 59 52 chr10 109431038 109431174 -30885591 + MER58B DNA MER1_type 201 337 -4 554 311 89 39 chr10 109432248 109432537 -30884228 + L1ME3A LINE L1 5646 5947 -223 1956 197 49 33 chr10 109433625 109434076 -30882689 + MER31B LTR ERV1 1 458 -8 217 324 106 78 chr10 109434597 109435020 -30881745 - L2 LINE L2 -27 3245 2811 322 249 90 94 chr10 109435602 109435673 -30881092 - MIR SINE MIR -43 219 149 2315 96 13 0 chr10 109435673 109435976 -30880789 - AluSx SINE Alu -3 309 3 322 249 90 94 chr10 109435976 109436105 -30880660 - MIR SINE MIR -113 149 20 589 135 0 149 chr10 109436422 109436563 -30880202 + FRAM SINE Alu 41 160 -16 200 311 0 0 chr10 109437987 109438048 -30878717 + (TAA)n Simple_repeat Simple_repeat 1 61 0 441 303 67 24 chr10 109438071 109438236 -30878529 - MIR SINE MIR -61 201 30 4353 142 34 13 chr10 109439267 109440014 -30876751 - L1MA8 LINE L1 0 6291 5530 351 248 149 28 chr10 109440173 109440314 -30876451 - MIR3 SINE MIR -39 169 12 181 299 93 19 chr10 109440485 109440592 -30876173 - MIR SINE MIR -74 134 20 2342 87 7 0 chr10 109441318 109441616 -30875149 + AluSp SINE Alu 1 300 -13 306 0 0 0 chr10 109443413 109443447 -30873318 + (TG)n Simple_repeat Simple_repeat 1 34 0 385 294 65 16 chr10 109443492 109443676 -30873089 - MIR SINE MIR -14 248 56 228 261 29 0 chr10 109444353 109444422 -30872343 - Charlie8 DNA MER1_type -993 1424 1354 * 321 250 148 0 chr10 109444397 109444505 -30872260 - Charlie8 DNA MER1_type -2137 280 157 304 396 19 0 chr10 109444919 109445078 -30871687 + MIR3 SINE MIR 23 184 -24 186 167 0 0 chr10 109445775 109445811 -30870954 + (TAA)n Simple_repeat Simple_repeat 3 38 0 469 263 26 19 chr10 109445827 109445983 -30870782 - MIR SINE MIR -14 248 92 335 316 161 0 chr10 109446052 109446220 -30870545 - MIR3 SINE MIR -3 205 11 337 266 59 0 chr10 109446564 109446684 -30870081 + MIR SINE MIR 37 164 -62 2745 58 28 0 chr10 109446825 109447151 -30869614 - L1PA8 LINE L1 -15 6157 5823 21 36 0 0 chr10 109448858 109448886 -30867879 + AT_rich Low_complexity Low_complexity 1 28 0 2346 88 3 0 chr10 109449507 109449803 -30866962 + AluSx SINE Alu 1 297 -15 385 276 92 12 chr10 109451021 109451184 -30865581 + MIR SINE MIR 62 237 -25 1961 225 136 25 chr10 109451447 109452062 -30864703 + L1M3e LINE L1 1499 2191 -4846 201 284 184 18 chr10 109452108 109452217 -30864548 - MIR SINE MIR -94 168 42 22 35 0 0 chr10 109452241 109452270 -30864495 + AT_rich Low_complexity Low_complexity 1 29 0 452 337 30 0 chr10 109452667 109452866 -30863899 + MIR SINE MIR 58 262 0 460 299 35 23 chr10 109453006 109453180 -30863585 - MIR3 SINE MIR -17 191 16 1490 163 6 118 chr10 109454608 109454940 -30861825 - AluJo SINE Alu -7 295 1 238 270 48 0 chr10 109454941 109455004 -30861761 + MIR SINE MIR 89 154 -108 510 284 101 58 chr10 109455022 109455367 -30861398 - MLT1L LTR MaLR -12 603 244 248 271 8 101 chr10 109455417 109455546 -30861219 - MLT1L LTR MaLR -498 117 1 2055 107 11 0 chr10 109455731 109456002 -30860763 - AluSx SINE Alu -38 274 1 190 270 34 56 chr10 109456115 109456204 -30860561 - MER5A DNA MER1_type -22 167 81 181 235 59 73 chr10 109456336 109456404 -30860361 + L2 LINE L2 3169 3235 -37 350 247 151 59 chr10 109456965 109457204 -30859561 - MIR SINE MIR 0 262 2 531 302 23 6 chr10 109457253 109457425 -30859340 - MER5B DNA MER1_type 0 178 4 277 324 48 55 chr10 109457547 109457819 -30858946 - L2 LINE L2 -189 3083 2814 275 244 138 16 chr10 109458043 109458166 -30858599 + L1ME4a LINE L1 5768 5905 -216 349 334 58 52 chr10 109458208 109458570 -30858195 - L2 LINE L2 -706 2608 2245 187 382 67 0 chr10 109458679 109458768 -30857997 - L2 LINE L2 -8 3264 3170 2169 124 59 16 chr10 109458880 109459203 -30857562 - MER1B DNA MER1_type 0 337 1 236 319 37 37 chr10 109460241 109460376 -30856389 + L2 LINE L2 2721 2855 -459 225 361 165 34 chr10 109460436 109460702 -30856063 + L2 LINE L2 2932 3232 -40 204 352 77 11 chr10 109461200 109461291 -30855474 + L2 LINE L2 3137 3233 -39 1458 173 22 4 chr10 109461829 109462106 -30854659 - MER41B LTR ERV1 0 635 354 25 83 0 0 chr10 109462108 109462168 -30854597 + AT_rich Low_complexity Low_complexity 1 60 0 1236 310 62 38 chr10 109462384 109462936 -30853829 - L1ME3A LINE L1 -225 5945 5408 2010 158 75 23 chr10 109462936 109463283 -30853482 - MLT1A1 LTR MaLR 0 365 1 1236 310 62 38 chr10 109463283 109463810 -30852955 - L1ME3A LINE L1 -762 5408 4895 489 110 0 0 chr10 109463810 109463883 -30852882 + (TA)n Simple_repeat Simple_repeat 1 73 0 1236 310 62 38 chr10 109463883 109463936 -30852829 - L1ME3A LINE L1 -1275 4895 4845 321 47 0 0 chr10 109463936 109463979 -30852786 + (TG)n Simple_repeat Simple_repeat 2 44 0 1236 310 62 38 chr10 109463979 109464433 -30852332 - L1ME3A LINE L1 -1325 4845 4317 559 280 45 103 chr10 109464527 109464974 -30851791 - L1ME3A LINE L1 -1977 4169 3749 181 299 117 58 chr10 109465578 109465715 -30851050 - L3 LINE CR1 -393 1184 1040 589 285 46 73 chr10 109465886 109466188 -30850577 + L2 LINE L2 3020 3313 0 1172 241 84 16 chr10 109466384 109466759 -30850006 + L1ME1 LINE L1 5766 6161 -5 207 0 0 0 chr10 109468390 109468413 -30848352 + (T)n Simple_repeat Simple_repeat 1 23 0 183 42 0 0 chr10 109468414 109468438 -30848327 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 210 250 0 0 chr10 109468508 109468552 -30848213 + L2 LINE L2 3179 3222 -91 365 265 72 50 chr10 109468706 109468887 -30847878 + MIR SINE MIR 63 247 -15 2058 137 0 0 chr10 109468995 109469295 -30847470 + AluSq SINE Alu 1 300 -13 286 200 0 0 chr10 109470682 109470727 -30846038 - MER41B LTR ERV1 -238 397 353 315 0 0 0 chr10 109470731 109470766 -30845999 + (TA)n Simple_repeat Simple_repeat 2 36 0 4194 42 0 2 chr10 109470769 109471248 -30845517 - L1PA5 LINE L1 0 6154 5677 2209 45 0 0 chr10 109471248 109471514 -30845251 + L1P LINE L1 4475 4740 -1406 2036 154 25 3 chr10 109471514 109471871 -30844894 - MER41B LTR ERV1 -270 365 1 3694 242 69 38 chr10 109472784 109473662 -30843103 + L1ME3A LINE L1 3442 4378 -1768 1937 128 17 10 chr10 109473662 109473951 -30842814 - AluSx SINE Alu -21 291 1 3694 242 69 38 chr10 109473951 109474437 -30842328 + L1ME3A LINE L1 4378 4848 -1298 811 188 0 0 chr10 109474445 109474573 -30842192 - FRAM SINE Alu -13 163 36 2791 251 62 40 chr10 109474585 109475759 -30841006 + L1ME3A LINE L1 4832 6039 -131 1997 113 14 25 chr10 109475759 109476084 -30840681 - AluSx SINE Alu 0 322 1 2791 251 62 40 chr10 109476084 109476214 -30840551 + L1ME3A LINE L1 6039 6165 -5 722 231 62 27 chr10 109476464 109476689 -30840076 + MIR SINE MIR 18 250 -12 1947 138 26 0 chr10 109478136 109478440 -30838325 - AluSx SINE Alu 0 312 1 333 308 51 32 chr10 109480890 109481046 -30835719 + MIR SINE MIR 81 239 -23 232 324 20 20 chr10 109481256 109481358 -30835407 + MER5A DNA MER1_type 67 168 -21 182 293 0 0 chr10 109481739 109481780 -30834985 + L2 LINE L2 3179 3219 -94 1513 162 16 67 chr10 109481845 109482160 -30834605 - AluJo SINE Alu -3 309 11 251 292 128 72 chr10 109482415 109482608 -30834157 - MIR SINE MIR -42 220 17 666 294 34 0 chr10 109482608 109482785 -30833980 + MER5A DNA MER1_type 1 183 -6 252 0 0 0 chr10 109482785 109482813 -30833952 + (A)n Simple_repeat Simple_repeat 1 28 0 495 235 140 6 chr10 109482864 109483019 -30833746 + MER5A DNA MER1_type 4 182 -7 429 331 17 45 chr10 109483922 109484100 -30832665 - MER5A DNA MER1_type 0 189 17 321 338 58 19 chr10 109484270 109484424 -30832341 - L2 LINE L2 -18 3295 3136 203 152 65 0 chr10 109485512 109485558 -30831207 + (CTAA)n Simple_repeat Simple_repeat 3 51 0 2494 176 37 19 chr10 109485559 109486071 -30830694 - L1MB5 LINE L1 -26 6148 5628 209 323 73 43 chr10 109486485 109486649 -30830116 - L2 LINE L2 -208 3064 2896 21 0 0 0 chr10 109487123 109487144 -30829621 + AT_rich Low_complexity Low_complexity 1 21 0 203 307 80 11 chr10 109487204 109487292 -30829473 + L2 LINE L2 3177 3270 -2 252 0 0 0 chr10 109488082 109488110 -30828655 + (CA)n Simple_repeat Simple_repeat 2 29 0 1829 186 75 60 chr10 109488876 109489205 -30827560 + MLT1D LTR MaLR 1 341 -164 1804 146 65 59 chr10 109489205 109489576 -30827189 - THE1C LTR MaLR -2 373 1 1829 186 75 60 chr10 109489576 109489742 -30827023 + MLT1D LTR MaLR 341 503 -2 1603 214 15 12 chr10 109489807 109490139 -30826626 + MLT1A1 LTR MaLR 33 365 0 2533 133 44 49 chr10 109490856 109491286 -30825479 - MSTC LTR MaLR 0 428 1 43 35 0 0 chr10 109492539 109492596 -30824169 + AT_rich Low_complexity Low_complexity 1 57 0 1317 255 75 27 chr10 109493259 109493820 -30822945 - L1ME4a LINE L1 -4 6117 5530 1986 269 89 65 chr10 109493835 109494839 -30821926 + L2 LINE L2 1866 2893 -421 959 296 10 27 chr10 109494850 109495147 -30821618 + L2 LINE L2 3022 3313 0 23 33 0 0 chr10 109495212 109495242 -30821523 + AT_rich Low_complexity Low_complexity 1 30 0 3140 142 20 4 chr10 109495242 109495742 -30821023 - L1MB2 LINE L1 -7 6164 5657 254 310 0 0 chr10 109495744 109495815 -30820950 - L1MB2 LINE L1 -521 5600 5530 475 185 74 9 chr10 109495830 109495938 -30820827 + L2 LINE L2 1866 1980 -1334 2091 120 46 40 chr10 109495942 109496334 -30820431 - L1M3 LINE L1 -518 5665 5281 864 211 18 46 chr10 109496566 109496784 -30819981 - MER20 DNA MER1_type -7 212 1 820 184 42 9 chr10 109497882 109498079 -30818686 - L1MB1 LINE L1 -2 6169 5976 1459 188 57 14 chr10 109498205 109498487 -30818278 - AluJb SINE Alu -18 294 1 515 268 66 31 chr10 109498516 109498658 -30818107 - MIR SINE MIR -10 252 98 2306 95 0 0 chr10 109498658 109498943 -30817822 - AluSq SINE Alu -28 285 1 515 268 66 31 chr10 109498943 109499028 -30817737 - MIR SINE MIR -164 98 17 238 246 0 136 chr10 109499432 109499542 -30817223 + MER102b DNA MER1_type 247 341 0 342 0 0 0 chr10 109499831 109499869 -30816896 + (TG)n Simple_repeat Simple_repeat 1 38 0 376 240 74 16 chr10 109499924 109500045 -30816720 + MIR SINE MIR 92 219 -43 265 349 8 8 chr10 109500262 109500394 -30816371 + (TG)n Simple_repeat Simple_repeat 1 132 0 2153 112 0 14 chr10 109500667 109500962 -30815803 - AluSx SINE Alu -9 303 13 589 349 98 47 chr10 109501610 109502566 -30814199 - L2 LINE L2 -471 2843 1839 617 121 11 0 chr10 109502622 109502713 -30814052 + AluSq/x SINE Alu 39 130 -182 238 242 165 55 chr10 109502782 109502873 -30813892 - MIR SINE MIR -131 131 31 342 45 0 0 chr10 109503151 109503195 -30813570 + (GA)n Simple_repeat Simple_repeat 1 44 0 18337 37 0 0 chr10 109503239 109505598 -30811167 - L1PA3 LINE L1 -2011 4135 1776 10319 32 2 0 chr10 109505598 109507600 -30809165 + L1PA3 LINE L1 4151 6155 0 2418 77 0 0 chr10 109508248 109508548 -30808217 - AluSc SINE Alu 0 309 10 245 323 55 61 chr10 109508582 109508746 -30808019 - MIR SINE MIR -66 196 34 442 331 115 32 chr10 109508896 109509737 -30807028 + L2 LINE L2 2255 3208 -105 183 42 0 0 chr10 109510087 109510111 -30806654 + (TG)n Simple_repeat Simple_repeat 1 24 0 243 339 17 75 chr10 109512598 109512772 -30803993 + L3 LINE CR1 909 1072 -505 21 36 0 0 chr10 109513133 109513161 -30803604 + AT_rich Low_complexity Low_complexity 1 28 0 1810 176 0 26 chr10 109513521 109513834 -30802931 - AluSx SINE Alu -7 305 1 438 259 98 12 chr10 109514430 109514611 -30802154 - L1ME3A LINE L1 -2 6162 5971 232 278 14 0 chr10 109514958 109515030 -30801735 + L1ME LINE L1 5560 5632 -489 338 273 68 0 chr10 109515037 109515169 -30801596 + L1ME LINE L1 5678 5818 -303 14324 129 25 8 chr10 109515228 109517581 -30799184 - Tigger1 DNA MER2_type 0 2418 26 287 171 13 0 chr10 109517691 109517767 -30798998 + GA-rich Low_complexity Low_complexity 3 79 0 295 292 108 22 chr10 109518535 109518720 -30798045 - MIR SINE MIR -25 237 37 1274 284 47 19 chr10 109520502 109520971 -30795794 + LTR16C LTR ERVL 3 484 -7 1079 155 107 1 chr10 109521138 109521515 -30795250 + MLT1D LTR MaLR 54 505 0 1713 144 4 146 chr10 109521741 109522018 -30794747 - MLT1B LTR MaLR 0 390 200 2302 117 3 0 chr10 109522018 109522327 -30794438 - AluSg SINE Alu 0 310 1 1713 144 4 146 chr10 109522327 109522501 -30794264 - MLT1B LTR MaLR -190 200 3 212 350 21 42 chr10 109523202 109523345 -30793420 + L2 LINE L2 2915 3054 -218 237 179 0 0 chr10 109524634 109524673 -30792092 - L2 LINE L2 -8 3305 3267 2407 232 93 49 chr10 109524966 109525676 -30791089 - L1ME1 LINE L1 -5 6161 5483 2260 132 0 0 chr10 109525676 109525986 -30790779 - AluSg SINE Alu 0 310 1 2407 232 93 49 chr10 109525986 109526975 -30789790 - L1ME1 LINE L1 -683 5483 4409 554 236 51 0 chr10 109527036 109527193 -30789572 + L1M4 LINE L1 2570 2734 -3412 188 346 0 39 chr10 109528302 109528380 -30788385 - L2 LINE L2 -5 3267 3193 329 337 43 12 chr10 109528732 109528895 -30787870 + MIR SINE MIR 20 187 -75 453 363 15 15 chr10 109529811 109530015 -30786750 - L3 LINE CR1 -62 1515 1312 324 0 0 0 chr10 109530584 109530620 -30786145 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 192 308 0 0 chr10 109530729 109530768 -30785997 - L2 LINE L2 -22 3291 3253 216 163 0 0 chr10 109530843 109530886 -30785879 + (TG)n Simple_repeat Simple_repeat 2 44 0 187 30 30 30 chr10 109530999 109531032 -30785733 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 393 309 22 22 chr10 109531634 109531773 -30784992 - MIR SINE MIR -76 186 48 245 299 138 17 chr10 109531752 109531926 -30784839 - L2 LINE L2 -1208 2106 1912 * 324 291 81 20 chr10 109532351 109532499 -30784266 - MIR SINE MIR -88 174 18 894 201 25 20 chr10 109533044 109533248 -30783517 - MER3 DNA MER1_type -1 208 4 350 292 23 62 chr10 109533259 109533389 -30783376 + MIR SINE MIR 22 146 -116 644 303 98 8 chr10 109533407 109533641 -30783124 - MIR SINE MIR -3 259 5 297 286 36 9 chr10 109533646 109533758 -30783007 + MIR SINE MIR 147 261 -1 355 276 35 9 chr10 109533922 109534038 -30782727 + MIR3 SINE MIR 89 207 -1 226 316 0 0 chr10 109534486 109534543 -30782222 + T-rich Low_complexity Low_complexity 3 59 0 650 289 57 61 chr10 109534766 109535289 -30781476 - LTR33 LTR ERVL 0 521 1 358 315 0 83 chr10 109535494 109535751 -30781014 + MIR SINE MIR 20 250 -12 259 351 24 36 chr10 109535887 109536052 -30780713 - L2 LINE L2 -131 3141 2979 1981 288 112 20 chr10 109536108 109536479 -30780286 + L2 LINE L2 2024 2360 -953 2222 107 10 0 chr10 109536479 109536770 -30779995 - AluSx SINE Alu -18 294 1 1981 288 112 20 chr10 109536770 109537504 -30779261 + L2 LINE L2 2360 3233 -80 298 279 50 50 chr10 109537723 109537863 -30778902 - L2 LINE L2 -10 3303 3164 248 235 161 0 chr10 109537901 109537982 -30778783 - MIR SINE MIR -29 233 140 256 326 11 11 chr10 109538281 109538370 -30778395 - L2 LINE L2 -26 3246 3158 2010 155 0 0 chr10 109539169 109539478 -30777287 - AluSx SINE Alu -3 309 1 381 265 72 50 chr10 109539586 109539767 -30776998 - MIR SINE MIR -15 247 63 212 250 0 0 chr10 109539921 109539965 -30776800 - L2 LINE L2 -91 3222 3179 267 104 0 0 chr10 109540035 109540083 -30776682 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1026 238 82 15 chr10 109541715 109542055 -30774710 - L1ME1 LINE L1 -5 6161 5799 605 285 46 73 chr10 109542286 109542588 -30774177 - L2 LINE L2 0 3313 3020 189 299 117 58 chr10 109542759 109542896 -30773869 + L3 LINE CR1 1040 1184 -393 196 192 154 0 chr10 109543447 109543499 -30773266 + MIR SINE MIR 133 192 -70 1065 309 77 47 chr10 109543500 109544497 -30772268 + L1ME3A LINE L1 3749 4714 -1456 321 47 0 0 chr10 109544497 109544540 -30772225 + (CA)n Simple_repeat Simple_repeat 2 44 0 1065 309 77 47 chr10 109544540 109544593 -30772172 + L1ME3A LINE L1 4714 4764 -1406 489 110 0 0 chr10 109544593 109544666 -30772099 + (TA)n Simple_repeat Simple_repeat 1 73 0 1065 309 77 47 chr10 109544666 109545193 -30771572 + L1ME3A LINE L1 4764 5274 -896 1846 158 75 23 chr10 109545193 109545540 -30771225 + MLT1A1 LTR MaLR 1 365 0 1065 309 77 47 chr10 109545540 109546092 -30770673 + L1ME3A LINE L1 5274 5945 -225 2289 116 0 0 chr10 109546255 109546558 -30770207 - AluSg SINE Alu -7 303 1 228 35 0 0 chr10 109546658 109546687 -30770078 + (TA)n Simple_repeat Simple_repeat 2 30 0 2308 99 3 0 chr10 109546687 109546979 -30769786 - AluSc SINE Alu -16 293 1 22 0 0 0 chr10 109546979 109547001 -30769764 + AT_rich Low_complexity Low_complexity 1 22 0 532 316 74 30 chr10 109548544 109548908 -30767857 - MLT1K LTR MaLR -20 568 189 192 250 103 29 chr10 109549754 109549822 -30766943 - MIR SINE MIR -64 144 72 282 309 60 0 chr10 109550285 109550369 -30766396 + L2 LINE L2 3184 3272 0 232 216 0 0 chr10 109551070 109551107 -30765658 - Charlie8 DNA MER1_type -2159 258 222 1633 198 119 3 chr10 109551642 109551995 -30764770 - MSTD LTR MaLR -2 394 1 2072 155 146 37 chr10 109552418 109552817 -30763948 + L1MC2 LINE L1 5835 6292 -52 1794 106 0 16 chr10 109552817 109553071 -30763694 - AluSq SINE Alu -1 312 63 2072 155 146 37 chr10 109553071 109553130 -30763635 + L1MC2 LINE L1 6292 6343 -1 326 271 124 0 chr10 109556200 109556329 -30760436 + L2 LINE L2 3161 3305 -8 414 0 0 0 chr10 109556368 109556414 -30760351 + (CA)n Simple_repeat Simple_repeat 2 47 0 427 208 121 20 chr10 109556483 109556632 -30760133 + L2 LINE L2 2407 2570 -744 921 251 60 94 chr10 109556645 109556969 -30759796 + L2 LINE L2 2441 2775 -538 3752 132 9 2 chr10 109556969 109557521 -30759244 + L1PA16 LINE L1 5602 6157 -9 921 251 60 94 chr10 109557521 109557823 -30758942 + L2 LINE L2 2775 3086 -227 455 215 0 0 chr10 109557823 109557930 -30758835 + L1MA7 LINE L1 6185 6291 0 921 251 60 94 chr10 109557930 109558015 -30758750 + L2 LINE L2 3086 3172 -141 2881 223 44 13 chr10 109558015 109558647 -30758118 - MER82 DNA MER2_type -1 652 1 921 251 60 94 chr10 109558647 109558844 -30757921 + L2 LINE L2 3172 3313 0 541 328 89 8 chr10 109559078 109559313 -30757452 + MIR SINE MIR 9 262 0 561 185 32 9 chr10 109559436 109559593 -30757172 - MER58B DNA MER1_type 0 341 27 716 213 55 18 chr10 109559617 109559781 -30756984 - MER5B DNA MER1_type -8 170 1 399 324 92 7 chr10 109560407 109560549 -30756216 + MER5A DNA MER1_type 35 188 -1 1287 259 90 76 chr10 109560665 109561128 -30755637 - MLT1H LTR MaLR 0 549 77 2242 121 0 0 chr10 109561128 109561425 -30755340 - AluSq SINE Alu -16 297 1 1287 259 90 76 chr10 109561425 109561463 -30755302 - MLT1H LTR MaLR -472 77 41 2162 109 0 13 chr10 109561727 109562029 -30754736 + AluSq SINE Alu 1 298 -15 369 0 0 0 chr10 109562031 109562072 -30754693 + (CA)n Simple_repeat Simple_repeat 2 42 0 504 355 55 49 chr10 109562164 109562615 -30754150 - L3 LINE CR1 -3 1574 1121 2237 113 3 0 chr10 109562619 109562921 -30753844 + AluSq SINE Alu 1 303 -10 192 349 0 0 chr10 109562989 109563055 -30753710 + MIR SINE MIR 81 146 -116 613 305 63 0 chr10 109564004 109564194 -30752571 + MIR3 SINE MIR 3 204 -4 587 250 0 110 chr10 109564896 109565132 -30751633 - L2 LINE L2 -212 3060 2851 2389 93 0 0 chr10 109566173 109566473 -30750292 - AluSg SINE Alu -10 300 1 326 340 75 34 chr10 109566910 109567178 -30749587 + L2 LINE L2 2977 3255 -17 560 107 0 0 chr10 109567184 109567259 -30749506 + AluS SINE Alu 1 75 -238 1749 159 73 105 chr10 109568041 109568519 -30748246 - MLT1C LTR MaLR -4 463 1 405 238 49 65 chr10 109569292 109569477 -30747288 - L1ME4a LINE L1 -16 6105 5924 227 299 68 17 chr10 109569591 109569708 -30747057 - L1ME4a LINE L1 -4 6117 5995 257 325 0 0 chr10 109569769 109569852 -30746913 + L2 LINE L2 3190 3272 0 2287 107 0 3 chr10 109570159 109570459 -30746306 - AluSc SINE Alu -8 301 3 280 266 0 0 chr10 109570993 109571057 -30745708 + (CAGA)n Simple_repeat Simple_repeat 4 67 0 430 152 14 22 chr10 109571672 109571810 -30744955 + (TA)n Simple_repeat Simple_repeat 2 138 0 392 250 22 0 chr10 109572112 109572204 -30744561 - L1MC4 LINE L1 -1334 6708 6615 211 239 0 0 chr10 109572206 109572252 -30744513 + (TA)n Simple_repeat Simple_repeat 1 46 0 283 281 45 106 chr10 109572789 109572988 -30743777 - L2 LINE L2 -45 3227 3041 184 200 0 0 chr10 109573021 109573056 -30743709 + MIR SINE MIR 156 190 -72 228 67 0 0 chr10 109573080 109573110 -30743655 + (TTA)n Simple_repeat Simple_repeat 2 31 0 537 247 162 0 chr10 109573954 109574108 -30742657 + MER5A DNA MER1_type 11 189 0 394 276 45 6 chr10 109574281 109574437 -30742328 - MER103 DNA DNA -2 164 3 1647 130 9 127 chr10 109574793 109575123 -30741642 + AluJo SINE Alu 1 291 -11 194 57 57 0 chr10 109575395 109575430 -30741335 + T-rich Low_complexity Low_complexity 4 40 0 266 85 0 43 chr10 109575729 109575776 -30740989 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 210 333 11 43 chr10 109576405 109576498 -30740267 + MIR SINE MIR 107 196 -66 27 0 0 0 chr10 109577737 109577764 -30739001 + AT_rich Low_complexity Low_complexity 1 27 0 6039 16 1 1 chr10 109578622 109579304 -30737461 + L1PA4 LINE L1 5374 6055 -100 363 329 64 36 chr10 109579593 109579842 -30736923 - L1ME4a LINE L1 -215 5906 5651 2230 135 29 6 chr10 109580407 109580748 -30736017 + L1PA16 LINE L1 5818 6166 0 192 152 0 0 chr10 109580765 109580798 -30735967 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 240 35 0 0 chr10 109580798 109580827 -30735938 + (CA)n Simple_repeat Simple_repeat 2 30 0 1947 243 65 50 chr10 109580945 109581525 -30735240 + MLT1E LTR MaLR 3 591 -2 1596 203 56 25 chr10 109583680 109584039 -30732726 - MLT1A2 LTR MaLR -4 370 1 360 247 118 77 chr10 109584205 109584671 -30732094 - L1ME4a LINE L1 0 6121 5637 257 264 27 27 chr10 109584814 109584924 -30731841 - L1ME4a LINE L1 -2379 5429 5320 267 273 62 68 chr10 109585637 109585959 -30730806 - L1ME4a LINE L1 -1444 4702 4383 193 348 58 32 chr10 109586773 109586928 -30729837 - L2 LINE L2 -168 3104 2946 432 213 189 0 chr10 109586988 109587110 -30729655 - MER20 DNA MER1_type -1 218 74 327 282 46 46 chr10 109589386 109589517 -30727248 + MIR SINE MIR 20 150 -58 346 174 81 29 chr10 109589561 109589731 -30727034 + L1MA4A LINE L1 6041 6280 -23 364 299 15 29 chr10 109589735 109589872 -30726893 + MER5A DNA MER1_type 52 186 -3 262 244 38 76 chr10 109590384 109590515 -30726250 + MLT1H LTR MaLR 47 172 -377 394 196 29 94 chr10 109590634 109590772 -30725993 + MLT1H LTR MaLR 421 549 0 190 345 82 80 chr10 109590994 109591371 -30725394 - L2 LINE L2 -344 2970 2593 2325 98 7 0 chr10 109591424 109591731 -30725034 + AluSp SINE Alu 3 311 -2 2385 87 0 3 chr10 109592061 109592360 -30724405 - AluY SINE Alu -13 298 1 322 47 0 0 chr10 109592392 109592435 -30724330 + AluY SINE Alu 257 299 -3 720 256 109 46 chr10 109592438 109592805 -30723960 - LTR16A LTR ERVL -47 403 14 184 281 16 16 chr10 109592928 109592992 -30723773 - MIR SINE MIR -14 248 185 330 266 169 39 chr10 109593017 109593171 -30723594 + MIR SINE MIR 6 179 -83 396 182 0 0 chr10 109594095 109594161 -30722604 - MIR SINE MIR -57 151 86 523 308 15 0 chr10 109594804 109594937 -30721828 - L2 LINE L2 0 3272 3138 941 181 14 134 chr10 109595083 109595360 -30721405 - MLT2B1 LTR ERVL 0 520 277 531 204 0 0 chr10 109595362 109595465 -30721300 - MLT2D LTR ERVL -229 324 222 1287 144 14 14 chr10 109595509 109595724 -30721041 - Ricksha DNA DNA -1478 568 354 201 390 25 8 chr10 109595899 109596017 -30720748 + MIR3 SINE MIR 40 159 -49 376 222 102 84 chr10 109596024 109596191 -30720574 + MER5C DNA MER1_type 6 175 -149 320 283 116 91 chr10 109597883 109597919 -30718846 + L2 LINE L2 1681 1715 -1599 354 226 12 0 chr10 109597919 109598003 -30718762 + L1MA8 LINE L1 6205 6289 -2 1838 159 0 7 chr10 109598010 109598306 -30718459 + AluSg SINE Alu 1 294 -16 320 283 116 91 chr10 109598306 109598976 -30717789 + L2 LINE L2 1720 2413 -901 21 0 0 0 chr10 109599373 109599394 -30717371 + AT_rich Low_complexity Low_complexity 1 21 0 362 229 0 31 chr10 109600192 109600288 -30716477 + MIR SINE MIR 110 202 -60 311 301 120 0 chr10 109601007 109601140 -30715625 - MIR SINE MIR -110 152 4 356 317 109 6 chr10 109602206 109602294 -30714471 - MIR SINE MIR -21 241 164 1900 103 3 35 chr10 109602294 109602584 -30714181 - L1MA1 LINE L1 0 6302 6022 356 317 109 6 chr10 109602584 109602678 -30714087 - MIR SINE MIR -98 164 40 282 160 0 0 chr10 109603401 109603451 -30713314 + T-rich Low_complexity Low_complexity 1 50 0 649 291 23 0 chr10 109603657 109603832 -30712933 - MIR SINE MIR -36 226 48 252 292 114 78 chr10 109604706 109604925 -30711840 + MIR SINE MIR 33 259 -3 330 278 26 53 chr10 109604983 109605134 -30711631 + MIR SINE MIR 31 177 -85 274 342 133 8 chr10 109605135 109605255 -30711510 - L2 LINE L2 -2 3270 3136 348 224 149 15 chr10 109605982 109606116 -30710649 + MIR SINE MIR 21 172 -90 406 241 71 88 chr10 109606541 109606711 -30710054 - MIR3 SINE MIR -22 186 20 448 284 93 22 chr10 109606859 109607042 -30709723 - MIR SINE MIR -62 200 5 185 316 70 0 chr10 109607525 109607582 -30709183 + L2 LINE L2 3250 3310 -3 728 232 24 29 chr10 109607931 109608138 -30708627 + MER112 DNA MER1_type 55 260 0 405 0 0 0 chr10 109608286 109608331 -30708434 + (CA)n Simple_repeat Simple_repeat 2 46 0 285 312 59 50 chr10 109609176 109609397 -30707368 + MIR SINE MIR 34 256 -6 754 305 22 13 chr10 109609446 109609672 -30707093 - MIR SINE MIR -21 241 14 238 289 11 56 chr10 109609732 109609813 -30706952 - MER5B DNA MER1_type -1 177 101 345 241 68 84 chr10 109609813 109610004 -30706761 - MER5A DNA MER1_type -1 188 1 389 215 0 93 chr10 109610004 109610111 -30706654 + MER5B DNA MER1_type 74 170 -8 245 186 0 0 chr10 109610259 109610302 -30706463 + L1MA7 LINE L1 6073 6115 -176 5990 124 46 8 chr10 109610330 109611546 -30705219 - L1PA14 LINE L1 -1 6160 4912 790 191 13 0 chr10 109611546 109611698 -30705067 + L1PA14 LINE L1 4763 4916 -1230 979 153 26 26 chr10 109611698 109611881 -30704884 + L1MA7 LINE L1 6096 6285 -6 22 56 0 0 chr10 109611881 109611917 -30704848 + AT_rich Low_complexity Low_complexity 1 36 0 292 250 0 0 chr10 109612773 109612829 -30703936 - L2 LINE L2 -3 3269 3214 413 212 83 30 chr10 109613190 109613322 -30703443 - MIR SINE MIR -4 258 120 2173 98 3 44 chr10 109613486 109613801 -30702964 - AluSg SINE Alu -8 302 1 517 294 63 17 chr10 109614718 109614956 -30701809 + MIR SINE MIR 13 261 -1 243 289 36 0 chr10 109614989 109615072 -30701693 + MIR SINE MIR 145 230 -32 2510 47 7 7 chr10 109615487 109615788 -30700977 - AluY SINE Alu -10 301 1 1132 174 41 41 chr10 109615792 109616010 -30700755 + MER20 DNA MER1_type 1 218 -1 225 100 100 0 chr10 109616634 109616694 -30700071 + (TCTCTG)n Simple_repeat Simple_repeat 4 69 0 233 304 59 10 chr10 109617210 109617312 -30699453 - L2 LINE L2 -221 3051 2945 3694 96 3 31 chr10 109617541 109618114 -30698651 - L1P LINE L1 -866 5280 4724 491 69 0 56 chr10 109618114 109618180 -30698585 + L1PA8 LINE L1 6097 6164 -8 653 244 17 28 chr10 109618563 109618743 -30698022 - MER5B DNA MER1_type 0 178 1 304 263 53 64 chr10 109618908 109619068 -30697697 + MIR SINE MIR 33 196 -66 275 311 19 39 chr10 109621014 109621117 -30695648 - L2 LINE L2 0 3272 3172 23 0 0 0 chr10 109621318 109621341 -30695424 + AT_rich Low_complexity Low_complexity 1 23 0 207 327 39 29 chr10 109621407 109621511 -30695254 + MIR SINE MIR 44 148 -114 22 35 0 0 chr10 109621744 109621773 -30694992 + AT_rich Low_complexity Low_complexity 1 29 0 381 198 0 0 chr10 109621823 109621909 -30694856 + CT-rich Low_complexity Low_complexity 1 86 0 268 250 48 32 chr10 109622087 109622211 -30694554 + MLT1K LTR MaLR 458 583 -5 2272 167 11 0 chr10 109622757 109623110 -30693655 + MER57A LTR ERV1 1 357 -46 1254 104 2 6 chr10 109623239 109623530 -30693235 + (TTCC)n Simple_repeat Simple_repeat 4 464 0 219 294 261 28 chr10 109623897 109624077 -30692688 - L3 LINE CR1 -7 1570 1349 234 317 12 0 chr10 109624126 109624208 -30692557 + MIR SINE MIR 168 250 -12 187 204 0 0 chr10 109624222 109624266 -30692499 + L3 LINE CR1 800 843 -734 26 30 0 0 chr10 109624301 109624334 -30692431 + AT_rich Low_complexity Low_complexity 1 33 0 381 22 0 0 chr10 109624548 109624594 -30692171 + (CA)n Simple_repeat Simple_repeat 1 46 0 180 77 0 0 chr10 109624712 109624738 -30692027 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1455 218 38 9 chr10 109624747 109625091 -30691674 + L1ME1 LINE L1 3951 4304 -1842 3081 233 74 21 chr10 109625094 109626305 -30690460 + L1ME1 LINE L1 4879 6148 -18 21 36 0 0 chr10 109626319 109626347 -30690418 + AT_rich Low_complexity Low_complexity 1 28 0 212 255 0 0 chr10 109626409 109626456 -30690309 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 361 269 60 37 chr10 109627672 109627806 -30688959 + MIR3 SINE MIR 10 146 -62 344 328 62 14 chr10 109628020 109628051 -30688714 + MER5B DNA MER1_type 17 45 -133 414 120 0 0 chr10 109628051 109628126 -30688639 + (CA)n Simple_repeat Simple_repeat 1 75 0 344 328 62 14 chr10 109628126 109628242 -30688523 + MER5B DNA MER1_type 45 175 -3 276 204 80 5 chr10 109628259 109628379 -30688386 - MER5A DNA MER1_type -3 186 1 * 283 280 70 10 chr10 109628379 109628478 -30688287 - L2 LINE L2 -47 3225 3121 1111 182 65 13 chr10 109628680 109628971 -30687794 + MER33 DNA MER1_type 1 296 -28 203 172 103 69 chr10 109629511 109629569 -30687196 + MIR SINE MIR 76 135 -127 22 0 0 0 chr10 109629608 109629630 -30687135 + AT_rich Low_complexity Low_complexity 1 22 0 302 196 71 80 chr10 109629660 109629772 -30686993 + L3 LINE CR1 1332 1442 -135 297 188 128 43 chr10 109629929 109630046 -30686719 - MER117 DNA MER1_type -62 135 9 215 194 0 0 chr10 109630374 109630410 -30686355 - MIR SINE MIR -107 101 66 867 291 20 16 chr10 109630473 109630724 -30686041 + MIR SINE MIR 10 261 -1 229 280 84 19 chr10 109631804 109631911 -30684854 + L2 LINE L2 3161 3274 -39 505 272 107 37 chr10 109632771 109633014 -30683751 - MIR SINE MIR 0 262 3 192 286 203 30 chr10 109634006 109634139 -30682626 - L2 LINE L2 -3158 156 1 3353 106 52 20 chr10 109634161 109634659 -30682106 + L1PA15 LINE L1 5652 6165 0 237 230 40 119 chr10 109634699 109634743 -30682022 + Charlie8 DNA MER1_type 43 89 -241 1921 112 4 4 chr10 109634743 109635011 -30681754 - AluSc SINE Alu -3 306 39 237 230 40 119 chr10 109635011 109635092 -30681673 + Charlie8 DNA MER1_type 89 158 -172 225 182 0 18 chr10 109635713 109635768 -30680997 + HAL1 LINE L1 2278 2331 -176 259 314 29 0 chr10 109635902 109635972 -30680793 + L2 LINE L2 3234 3305 -8 475 293 33 56 chr10 109636765 109637263 -30679502 - L1MB8 LINE L1 -319 5850 5415 245 362 58 78 chr10 109638285 109638578 -30678187 + L2 LINE L2 2978 3264 -8 264 356 129 15 chr10 109638874 109639138 -30677627 + L2 LINE L2 2120 2413 -901 394 220 45 68 chr10 109639575 109639707 -30677058 - L2 LINE L2 -1 3312 3184 533 217 126 56 chr10 109639769 109639967 -30676798 + MIR SINE MIR 12 223 -39 270 300 67 25 chr10 109640025 109640145 -30676620 - L2 LINE L2 -161 3152 3028 203 243 14 14 chr10 109640224 109640294 -30676471 - L2 LINE L2 -999 2315 2246 468 275 17 0 chr10 109640422 109640542 -30676223 - L2 LINE L2 -1126 2188 2067 214 256 186 0 chr10 109640550 109640636 -30676129 - L2 LINE L2 -470 2844 2743 310 286 18 9 chr10 109641346 109641458 -30675307 - HAL1b LINE L1 -567 781 669 23 33 0 0 chr10 109641751 109641781 -30674984 + AT_rich Low_complexity Low_complexity 1 30 0 351 282 28 83 chr10 109641796 109641977 -30674788 - HAL1b LINE L1 -1023 325 155 215 306 97 21 chr10 109642906 109643050 -30673715 + L2 LINE L2 2743 2897 -417 * 323 348 170 27 chr10 109643028 109643404 -30673361 + L2 LINE L2 2842 3271 -1 452 265 56 71 chr10 109647068 109647288 -30669477 + MIR SINE MIR 8 217 -45 4660 121 2 0 chr10 109648387 109649017 -30667748 + L1PA15 LINE L1 5533 6163 -2 513 282 46 75 chr10 109649049 109649290 -30667475 + LTR16C LTR ERVL 249 482 -9 418 363 61 45 chr10 109649432 109650025 -30666740 + L2 LINE L2 1567 2168 -1146 2637 102 10 34 chr10 109650038 109650422 -30666343 + THE1C LTR MaLR 1 375 0 10334 127 30 5 chr10 109650422 109651964 -30664801 + THE1C-int LTR MaLR 1 1580 0 2395 133 16 42 chr10 109651964 109652349 -30664416 + THE1C LTR MaLR 1 375 0 282 284 0 0 chr10 109652749 109652823 -30663942 + MER117 DNA MER1_type 1 74 -123 21 0 0 0 chr10 109653254 109653275 -30663490 + AT_rich Low_complexity Low_complexity 1 21 0 350 313 48 27 chr10 109653276 109653423 -30663342 - MIR SINE MIR -74 188 39 186 43 0 0 chr10 109654481 109654504 -30662261 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 269 355 27 0 chr10 109654515 109654625 -30662140 - L2 LINE L2 -22 3291 3179 402 336 25 0 chr10 109654876 109654998 -30661767 + MIR3 SINE MIR 35 159 -49 248 319 44 31 chr10 109655559 109655719 -30661046 - L2 LINE L2 -75 3238 3077 237 274 73 73 chr10 109655743 109655867 -30660898 - L2 LINE L2 -2 3270 3147 433 325 153 0 chr10 109657260 109657463 -30659302 - MIR SINE MIR 0 262 29 270 0 0 0 chr10 109657642 109657672 -30659093 + (CA)n Simple_repeat Simple_repeat 1 30 0 311 261 8 108 chr10 109658611 109658741 -30658024 + MIR SINE MIR 32 148 -114 381 340 108 9 chr10 109659342 109659574 -30657191 + MIR SINE MIR 7 261 -1 336 143 0 0 chr10 109661264 109661320 -30655445 + (T)n Simple_repeat Simple_repeat 1 56 0 243 0 0 0 chr10 109661625 109661652 -30655113 + (CA)n Simple_repeat Simple_repeat 2 28 0 557 269 67 29 chr10 109662019 109662257 -30654508 - MIR SINE MIR -10 252 6 2897 120 52 2 chr10 109663546 109663954 -30652811 - MSTA LTR MaLR 0 428 1 357 320 20 10 chr10 109664062 109664162 -30652603 + MIR SINE MIR 37 137 -125 310 337 10 0 chr10 109665425 109665526 -30651239 + MIR SINE MIR 36 137 -125 1646 149 7 60 chr10 109665629 109665930 -30650835 + AluJo SINE Alu 9 293 -19 227 238 140 38 chr10 109666120 109666293 -30650472 + MIR SINE MIR 20 262 0 868 228 46 115 chr10 109666357 109666704 -30650061 - MLT1A2 LTR MaLR -51 323 1 3916 225 34 47 chr10 109666716 109668082 -30648683 - MLT1A1-int LTR MaLR -15 1356 1 1217 216 66 63 chr10 109668082 109668444 -30648321 - MLT1A1 LTR MaLR 0 365 3 732 162 47 20 chr10 109669316 109669464 -30647301 + L1MB5 LINE L1 6023 6174 0 1175 183 28 0 chr10 109669592 109669772 -30646993 + MER5A DNA MER1_type 5 189 0 188 329 24 24 chr10 109670681 109670763 -30646002 - MIR SINE MIR -93 115 34 287 256 13 0 chr10 109672268 109672346 -30644419 + (TTCA)n Simple_repeat Simple_repeat 1 79 0 328 394 56 31 chr10 109672355 109672642 -30644123 - L2 LINE L2 -49 3223 2930 234 247 161 0 chr10 109673822 109673903 -30642862 + MIR SINE MIR 100 193 -69 1884 198 143 65 chr10 109674206 109674792 -30641973 + MER92B LTR ERV1 5 636 0 460 298 201 45 chr10 109674909 109675466 -30641299 + L2 LINE L2 1724 2367 -947 423 369 47 0 chr10 109675519 109675668 -30641097 - L2 LINE L2 0 3272 3117 214 369 0 10 chr10 109675841 109675944 -30640821 + L2 LINE L2 2578 2679 -635 248 239 221 44 chr10 109676290 109676403 -30640362 + L2 LINE L2 3180 3312 -1 359 277 17 25 chr10 109676917 109677036 -30639729 + MER5A DNA MER1_type 2 119 -70 33 0 0 0 chr10 109678322 109678355 -30638410 + AT_rich Low_complexity Low_complexity 1 33 0 647 316 0 0 chr10 109678625 109678815 -30637950 + MIR SINE MIR 34 223 -39 262 360 80 0 chr10 109678821 109678921 -30637844 - MIR3 SINE MIR -52 156 49 495 286 141 19 chr10 109679814 109680020 -30636745 + MIR SINE MIR 12 242 -20 1957 149 69 33 chr10 109680803 109681165 -30635600 + THE1C LTR MaLR 1 375 0 1507 199 23 28 chr10 109684203 109684596 -30632169 - Charlie5 DNA MER1_type 0 2624 2234 499 198 99 0 chr10 109684604 109684715 -30632050 - MER3 DNA MER1_type -87 122 48 202 329 14 0 chr10 109684766 109684836 -30631929 - MIR SINE MIR -116 146 76 2518 222 76 25 chr10 109684912 109685571 -30631194 - L1ME1 LINE L1 -3 6163 5539 185 0 40 0 chr10 109685571 109685596 -30631169 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 342 45 0 0 chr10 109685595 109685639 -30631126 + (TG)n Simple_repeat Simple_repeat 2 45 0 2518 222 76 25 chr10 109685596 109685705 -30631060 - L1ME1 LINE L1 -627 5539 5401 2148 128 0 3 chr10 109685749 109686053 -30630712 + AluSg SINE Alu 1 303 -7 413 197 27 25 chr10 109686651 109686818 -30629947 - MER112 DNA MER1_type -123 137 1 254 281 12 12 chr10 109688549 109688631 -30628134 - MIR SINE MIR -84 124 43 241 410 10 0 chr10 109689919 109690019 -30626746 - L2 LINE L2 -3 3310 3210 180 111 0 0 chr10 109690268 109690295 -30626470 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 392 249 42 85 chr10 109692195 109692305 -30624460 + MIR SINE MIR 104 206 -56 2119 136 0 0 chr10 109692305 109692613 -30624152 + AluSx SINE Alu 1 308 -4 392 249 42 85 chr10 109692613 109692667 -30624098 + MIR SINE MIR 206 261 -1 306 258 39 70 chr10 109692765 109692893 -30623872 + MIR SINE MIR 27 150 -58 26 0 0 0 chr10 109694114 109694140 -30622625 + AT_rich Low_complexity Low_complexity 1 26 0 327 243 69 98 chr10 109694756 109694929 -30621836 - MER117 DNA MER1_type 0 197 30 235 242 30 0 chr10 109695424 109695490 -30621275 - L2 LINE L2 0 3313 3246 429 103 0 0 chr10 109695814 109695882 -30620883 + (CA)n Simple_repeat Simple_repeat 2 69 0 217 291 25 13 chr10 109696567 109696646 -30620119 - L2 LINE L2 0 3313 3234 844 154 166 6 chr10 109696900 109697075 -30619690 + MER3 DNA MER1_type 1 203 -6 208 418 5 74 chr10 109697134 109697323 -30619442 - L2 LINE L2 -92 3180 3005 201 309 0 0 chr10 109697407 109697462 -30619303 + (CACCAT)n Simple_repeat Simple_repeat 5 59 0 189 121 0 0 chr10 109698513 109698546 -30618219 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 267 271 14 0 chr10 109698550 109698620 -30618145 + (TGAA)n Simple_repeat Simple_repeat 1 71 0 327 261 14 72 chr10 109699011 109699149 -30617616 + MIR SINE MIR 82 211 -51 210 118 0 0 chr10 109699180 109699214 -30617551 + (TTG)n Simple_repeat Simple_repeat 2 35 0 721 334 91 46 chr10 109699610 109700236 -30616529 - L2 LINE L2 -907 2407 1754 216 158 0 0 chr10 109700283 109700321 -30616444 + (ATG)n Simple_repeat Simple_repeat 3 40 0 413 182 26 0 chr10 109700685 109700762 -30616003 - MER116 DNA Mariner 0 80 2 519 261 82 10 chr10 109700969 109701164 -30615601 - MIR SINE MIR 0 262 54 334 383 42 46 chr10 109703813 109704098 -30612667 - L3 LINE CR1 -5 1572 1289 208 346 13 0 chr10 109704242 109704320 -30612445 - L2 LINE L2 -1 3271 3193 229 294 71 32 chr10 109704975 109705101 -30611664 + L2 LINE L2 2227 2357 -957 1299 120 0 0 chr10 109705116 109705300 -30611465 + AluSc SINE Alu 125 308 -1 664 342 78 29 chr10 109705379 109706129 -30610636 + L2 LINE L2 2461 3305 -8 207 0 0 0 chr10 109706397 109706420 -30610345 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1971 125 22 42 chr10 109707002 109707314 -30609451 - AluSq SINE Alu -7 306 1 206 269 13 13 chr10 109707902 109707980 -30608785 + GA-rich Low_complexity Low_complexity 1 78 0 184 395 0 0 chr10 109708104 109708185 -30608580 - L2 LINE L2 0 3313 3233 1732 156 3 42 chr10 109708223 109708531 -30608234 + AluJo SINE Alu 1 296 -16 1876 143 0 4 chr10 109708534 109708833 -30607932 + AluSc SINE Alu 1 298 0 233 276 26 0 chr10 109708878 109708954 -30607811 + (TA)n Simple_repeat Simple_repeat 1 78 0 269 229 0 72 chr10 109710239 109710322 -30606443 + MIR SINE MIR 110 186 -76 240 59 0 0 chr10 109710561 109710595 -30606170 + (CA)n Simple_repeat Simple_repeat 2 35 0 373 302 35 9 chr10 109712281 109712397 -30604368 + L2 LINE L2 3195 3313 0 375 317 74 53 chr10 109712512 109712755 -30604010 + L2 LINE L2 2682 2929 -385 185 236 94 79 chr10 109713010 109713137 -30603628 + L2 LINE L2 3185 3313 0 198 0 0 0 chr10 109714192 109714214 -30602551 + (T)n Simple_repeat Simple_repeat 1 22 0 291 267 60 43 chr10 109714214 109714330 -30602435 - MIR SINE MIR -32 230 113 1867 152 0 30 chr10 109714664 109714966 -30601799 - AluJb SINE Alu -19 293 1 268 309 47 47 chr10 109715841 109716003 -30600762 + MIR SINE MIR 6 168 -40 1443 180 45 30 chr10 109716091 109716424 -30600341 - MER58B DNA MER1_type 0 341 4 2483 175 18 16 chr10 109716595 109717098 -30599667 - L1MA10 LINE L1 0 6334 5831 21 0 0 0 chr10 109717111 109717132 -30599633 + AT_rich Low_complexity Low_complexity 1 21 0 301 232 72 40 chr10 109717291 109717416 -30599349 + Charlie8 DNA MER1_type 140 268 -2149 481 314 34 0 chr10 109717952 109718127 -30598638 - L1ME LINE L1 -374 5796 5616 232 339 62 27 chr10 109718259 109718371 -30598394 + L2 LINE L2 3155 3270 -2 2457 86 0 3 chr10 109718564 109718866 -30597899 + AluSq SINE Alu 3 303 -10 317 256 48 72 chr10 109719709 109719834 -30596931 - L2 LINE L2 0 3313 3192 210 105 0 0 chr10 109719941 109719979 -30596786 + (TGG)n Simple_repeat Simple_repeat 1 38 0 333 233 300 20 chr10 109721637 109721787 -30594978 + MIR3 SINE MIR 12 203 -5 535 241 0 28 chr10 109722178 109722298 -30594467 + MIR SINE MIR 45 162 -46 2036 102 25 18 chr10 109722343 109722663 -30594102 - AluSg SINE Alu 0 322 1 23 54 0 0 chr10 109722833 109722870 -30593895 + AT_rich Low_complexity Low_complexity 1 37 0 251 186 0 0 chr10 109722903 109722946 -30593819 - MIR SINE MIR -101 161 119 1768 130 3 33 chr10 109723552 109723851 -30592914 - MER1B DNA MER1_type 0 339 50 286 182 0 0 chr10 109724026 109724081 -30592684 + LTR48 LTR ERV1 650 704 -83 329 253 24 0 chr10 109724249 109724332 -30592433 - L2 LINE L2 -248 3024 2940 355 270 7 80 chr10 109725628 109725765 -30591000 - MIR3 SINE MIR -75 133 7 721 198 93 0 chr10 109726763 109726935 -30589830 + MER5A DNA MER1_type 2 189 0 2157 125 3 7 chr10 109728283 109728586 -30588179 + AluSp SINE Alu 1 302 -11 1031 217 179 24 chr10 109728770 109729184 -30587581 - MLT1D LTR MaLR 0 505 28 1347 311 85 49 chr10 109729420 109730175 -30586590 - L3 LINE CR1 -462 1115 334 182 258 0 48 chr10 109730255 109730317 -30586448 - L2 LINE L2 -217 3055 2997 209 71 0 0 chr10 109731518 109731546 -30585219 - MIR SINE MIR -65 143 116 345 351 12 30 chr10 109731576 109731744 -30585021 + L1ME4a LINE L1 5954 6118 -3 846 331 113 36 chr10 109733669 109734682 -30582083 + L2 LINE L2 2205 3306 -7 365 320 47 7 chr10 109735584 109735734 -30581031 + MIR SINE MIR 46 201 -61 397 277 39 8 chr10 109735884 109736014 -30580751 - MARNA DNA Mariner -57 529 396 202 365 62 14 chr10 109736115 109736260 -30580505 - MIR SINE MIR -90 172 21 21 57 0 0 chr10 109736496 109736531 -30580234 + AT_rich Low_complexity Low_complexity 1 35 0 186 139 0 28 chr10 109737681 109737717 -30579048 - L2 LINE L2 -6 3266 3232 * 369 272 56 37 chr10 109737696 109737858 -30578907 - MIR SINE MIR -14 248 84 303 219 68 0 chr10 109738313 109738386 -30578379 - MER3 DNA MER1_type -131 78 1 303 310 71 32 chr10 109739071 109739226 -30577539 + MIR3 SINE MIR 30 190 -18 288 0 0 0 chr10 109739234 109739266 -30577499 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2180 132 3 0 chr10 109740021 109740331 -30576434 + AluSx SINE Alu 1 311 -1 1197 194 57 107 chr10 109740340 109740799 -30575966 + MER63B DNA MER1_type 1 436 0 2283 97 3 7 chr10 109741105 109741404 -30575361 - AluSq SINE Alu -15 298 1 218 282 38 92 chr10 109741429 109741560 -30575205 - L2 LINE L2 0 3313 3190 25 31 0 0 chr10 109741958 109741990 -30574775 + AT_rich Low_complexity Low_complexity 1 32 0 357 252 197 27 chr10 109743830 109743977 -30572788 - MER5A DNA MER1_type 0 189 18 646 143 34 0 chr10 109744854 109745001 -30571764 - Charlie5 DNA MER1_type -27 2585 2434 265 146 109 18 chr10 109745002 109745057 -30571708 - Charlie5 DNA MER1_type -2542 70 11 333 174 0 0 chr10 109745411 109745480 -30571285 + (ATGGTG)n Simple_repeat Simple_repeat 1 69 0 229 333 54 9 chr10 109748205 109748316 -30568449 + MIR SINE MIR 129 244 -18 289 312 162 0 chr10 109748334 109748488 -30568277 + MIR SINE MIR 5 183 -79 440 280 76 0 chr10 109750329 109750447 -30566318 - L2 LINE L2 -4 3268 3142 2195 80 3 7 chr10 109750696 109750985 -30565780 + AluSc SINE Alu 1 288 -21 2538 182 68 4 chr10 109751056 109751584 -30565181 - MER68 LTR ERV1 0 562 1 968 75 0 8 chr10 109753045 109753178 -30563587 - L1MA1 LINE L1 0 6302 6171 311 289 10 10 chr10 109753850 109753947 -30562818 + GA-rich Low_complexity Low_complexity 4 100 0 2386 96 3 6 chr10 109754006 109754319 -30562446 - AluSq SINE Alu -1 312 1 216 328 188 8 chr10 109755504 109755632 -30561133 + MIR SINE MIR 57 207 -55 11276 199 18 55 chr10 109755887 109759949 -30556816 - L1MC1 LINE L1 -11 7024 3366 492 18 0 0 chr10 109759949 109760006 -30556759 + (TG)n Simple_repeat Simple_repeat 2 58 0 11276 199 18 55 chr10 109760006 109763247 -30553518 - L1MC1 LINE L1 -3669 3366 4 5536 237 29 30 chr10 109763247 109765053 -30551712 - L1MCa LINE L1 -1763 4663 2861 5001 185 61 29 chr10 109765087 109765372 -30551393 - L1MCa LINE L1 -4191 2235 1961 4276 56 4 6 chr10 109765372 109765911 -30550854 - L1PA7 LINE L1 0 6154 5617 5001 185 61 29 chr10 109765911 109767400 -30549365 - L1MCa LINE L1 -4465 1961 313 315 0 0 0 chr10 109767400 109767435 -30549330 + (TG)n Simple_repeat Simple_repeat 2 36 0 421 298 60 71 chr10 109767680 109767932 -30548833 + MIR SINE MIR 2 250 -12 313 276 66 46 chr10 109768123 109768275 -30548490 - MIR3 SINE MIR -43 165 11 182 206 15 0 chr10 109768858 109768926 -30547839 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 382 313 71 43 chr10 109769145 109769356 -30547409 + MIR SINE MIR 2 218 -44 244 173 25 74 chr10 109772770 109772851 -30543914 - L1ME2 LINE L1 -151 6013 5937 243 79 0 0 chr10 109772912 109772950 -30543815 + (TA)n Simple_repeat Simple_repeat 2 39 0 382 288 41 7 chr10 109772973 109773119 -30543646 - L1ME2 LINE L1 -402 5762 5612 5056 152 101 8 chr10 109773134 109774067 -30542698 - LTR28 LTR ERV1 0 1020 1 244 68 23 23 chr10 109774069 109774113 -30542652 + L1MC/D LINE L1 5563 5606 -753 234 283 33 0 chr10 109774105 109774197 -30542568 - L1ME2 LINE L1 -601 5583 5489 * 957 127 0 0 chr10 109774203 109774418 -30542347 + (TA)n Simple_repeat Simple_repeat 1 215 0 29 0 0 0 chr10 109775053 109775082 -30541683 + AT_rich Low_complexity Low_complexity 1 29 0 496 255 16 85 chr10 109775083 109775330 -30541435 - MER8 DNA MER2_type -1 238 9 2124 123 10 3 chr10 109775573 109775874 -30540891 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr10 109776210 109776230 -30540535 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 195 42 0 0 chr10 109777096 109777120 -30539645 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 426 161 0 21 chr10 109777204 109777297 -30539468 - L1PA7 LINE L1 -2 6152 6062 287 307 18 0 chr10 109777450 109777564 -30539201 - L1ME3A LINE L1 -8 6162 6047 2008 155 13 0 chr10 109778257 109778561 -30538204 + AluSx SINE Alu 1 308 -4 191 267 133 0 chr10 109779037 109779127 -30537638 + L2 LINE L2 3203 3304 -9 2086 71 4 15 chr10 109779252 109779519 -30537246 + AluSc SINE Alu 35 298 -11 1879 141 19 22 chr10 109780387 109780700 -30536065 + AluSx SINE Alu 1 312 0 2223 150 8 11 chr10 109780731 109781097 -30535668 - MLT1A1 LTR MaLR 0 365 1 1981 119 76 17 chr10 109781867 109782221 -30534544 - THE1C LTR MaLR 0 375 1 297 279 122 66 chr10 109782740 109783102 -30533663 - L1ME3A LINE L1 -255 5866 5485 246 81 0 0 chr10 109783990 109784027 -30532738 + (GA)n Simple_repeat Simple_repeat 2 38 0 974 195 14 65 chr10 109785280 109785398 -30531367 + MER8 DNA MER2_type 2 106 -133 1516 115 0 0 chr10 109785398 109785598 -30531167 + AluSc SINE Alu 93 292 -17 974 195 14 65 chr10 109785598 109785694 -30531071 + MER8 DNA MER2_type 106 205 -34 2519 39 7 3 chr10 109785694 109785999 -30530766 + AluY SINE Alu 1 306 -5 1811 31 0 0 chr10 109786024 109786247 -30530518 + L1PA4 LINE L1 5907 6129 -26 209 32 0 32 chr10 109786251 109786282 -30530483 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 201 171 0 24 chr10 109786855 109786896 -30529869 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 449 310 134 16 chr10 109788381 109788568 -30528197 + MIR SINE MIR 9 217 -45 359 228 18 8 chr10 109789908 109790074 -30526691 + MER3 DNA MER1_type 6 209 0 307 173 0 0 chr10 109790179 109790231 -30526534 - L2 LINE L2 0 3272 3221 408 319 22 7 chr10 109791793 109791928 -30524837 - L2 LINE L2 0 3272 3136 464 262 140 37 chr10 109792175 109792339 -30524426 + MER5A DNA MER1_type 9 189 0 234 301 53 9 chr10 109792495 109792608 -30524157 - MIR SINE MIR -23 239 122 320 214 118 160 chr10 109793419 109793681 -30523084 + MIR SINE MIR 12 262 0 326 253 38 25 chr10 109793824 109793903 -30522862 - L2 LINE L2 -40 3273 3194 414 290 77 39 chr10 109796041 109796300 -30520465 - MLT1H LTR MaLR -182 367 99 189 244 49 0 chr10 109797537 109797578 -30519187 + MER5A DNA MER1_type 147 189 0 189 238 63 0 chr10 109797998 109798061 -30518704 - MIR SINE MIR -92 116 50 236 346 33 46 chr10 109798753 109798906 -30517859 + MIR SINE MIR 57 207 -55 373 195 0 49 chr10 109800934 109801016 -30515749 - L2 LINE L2 0 3313 3236 326 298 10 0 chr10 109801042 109801146 -30515619 + MER94 DNA DNA 25 129 -5 417 202 30 10 chr10 109801412 109801511 -30515254 - LTR67 LTR ERVL 0 557 457 257 211 0 18 chr10 109801745 109801802 -30514963 + MLT1B LTR MaLR 1 56 -334 1480 169 15 40 chr10 109801909 109802292 -30514473 - MER1B DNA MER1_type 0 339 1 338 264 32 12 chr10 109804063 109804168 -30512597 + MIR SINE MIR 31 137 -71 22 0 0 0 chr10 109804178 109804200 -30512565 + AT_rich Low_complexity Low_complexity 1 22 0 1740 167 3 3 chr10 109804203 109804490 -30512275 + AluJo SINE Alu 1 287 -25 27 0 0 0 chr10 109804493 109804520 -30512245 + AT_rich Low_complexity Low_complexity 1 27 0 708 12 0 0 chr10 109805487 109805568 -30511197 + (TTTTC)n Simple_repeat Simple_repeat 5 85 0 1322 217 52 57 chr10 109805953 109806358 -30510407 - MLT1C LTR MaLR 0 467 65 238 303 68 59 chr10 109807881 109808091 -30508674 + MIR3 SINE MIR 2 200 -62 230 106 0 64 chr10 109808215 109808262 -30508503 + LTR16A1 LTR ERVL 62 105 -352 363 311 44 19 chr10 109808314 109808454 -30508311 + LTR16A1 LTR ERVL 247 395 -62 2214 114 3 10 chr10 109808454 109808762 -30508003 + AluSq SINE Alu 1 306 -7 363 311 44 19 chr10 109808762 109808827 -30507938 + LTR16A1 LTR ERVL 395 457 0 739 202 15 12 chr10 109809606 109809919 -30506846 + CT-rich Low_complexity Low_complexity 1 313 0 1058 178 0 6 chr10 109810354 109810534 -30506231 + AluJb SINE Alu 119 297 -15 922 25 25 0 chr10 109812455 109812575 -30504190 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 404 218 18 27 chr10 109812757 109812867 -30503898 + MER63 DNA MER1_type 3 737 -99 381 244 11 0 chr10 109812858 109812948 -30503817 + MER63 DNA MER1_type 969 1059 -1 * 207 266 7 147 chr10 109813063 109813119 -30503646 + L2 LINE L2 3189 3215 -98 2258 117 0 0 chr10 109813119 109813427 -30503338 - AluSx SINE Alu -4 308 1 207 266 7 147 chr10 109813427 109813513 -30503252 + L2 LINE L2 3215 3311 -2 1319 142 5 14 chr10 109813671 109813889 -30502876 - AluSg/x SINE Alu -1 311 96 2353 246 20 38 chr10 109815515 109816518 -30500247 - L1ME1 LINE L1 -5 6161 5180 1263 207 121 25 chr10 109816595 109816646 -30500119 - L1ME1 LINE L1 -1200 4946 4901 2310 112 7 0 chr10 109816646 109816951 -30499814 - AluSx SINE Alu -3 309 3 1263 207 121 25 chr10 109816951 109817454 -30499311 - L1ME1 LINE L1 -1245 4901 4339 523 332 26 10 chr10 109817541 109817845 -30498920 - L1MEc LINE L1 -6056 340 32 253 321 72 10 chr10 109817845 109818038 -30498727 - L1MC/D LINE L1 -2030 5778 5574 235 238 103 40 chr10 109818127 109818253 -30498512 + L1MC/D LINE L1 5334 5467 -2341 1429 108 14 0 chr10 109818931 109819145 -30497620 - L1PA13 LINE L1 -5 6158 5942 206 167 0 21 chr10 109819221 109819269 -30497496 + (TTAA)n Simple_repeat Simple_repeat 4 50 0 487 295 94 49 chr10 109819729 109819953 -30496812 + MIR SINE MIR 1 234 -28 1019 300 86 32 chr10 109820997 109821497 -30495268 + MLT1H1 LTR MaLR 5 531 -24 638 229 40 4 chr10 109823136 109823363 -30493402 - L1MA7 LINE L1 -1 6290 6056 11265 181 34 86 chr10 109823370 109825401 -30491364 + L1M2 LINE L1 724 2860 -4706 1713 155 9 16 chr10 109825401 109825724 -30491041 - L1PB1 LINE L1 -3 6148 5828 11265 181 34 86 chr10 109825724 109825924 -30490841 + L1M2 LINE L1 2860 3069 -4497 7300 42 5 1 chr10 109825924 109827617 -30489148 - L1PA5 LINE L1 -2 6152 4457 11265 181 34 86 chr10 109827617 109828336 -30488429 + L1M2 LINE L1 3069 3520 -4046 398 114 45 0 chr10 109828339 109828427 -30488338 + GA-rich Low_complexity Low_complexity 2 93 0 10268 194 28 20 chr10 109828430 109829981 -30486784 + L1M2 LINE L1 3461 5042 -2523 2263 128 19 25 chr10 109829981 109830347 -30486418 - THE1B LTR MaLR 0 364 1 10268 194 28 20 chr10 109830347 109831492 -30485273 + L1M2 LINE L1 5042 6176 -1389 595 277 86 51 chr10 109831485 109832055 -30484710 - L1M1 LINE L1 -4121 3444 2855 * 292 355 77 7 chr10 109832209 109832364 -30484401 + MIR3 SINE MIR 43 208 0 397 246 254 7 chr10 109832829 109832967 -30483798 + MER5A DNA MER1_type 9 180 -9 1864 161 15 0 chr10 109833157 109833493 -30483272 - L1PA16 LINE L1 0 6166 5826 670 312 218 34 chr10 109834452 109835103 -30481662 + L2 LINE L2 62 832 -2482 1021 323 86 30 chr10 109835112 109835853 -30480912 + L2 LINE L2 1604 2386 -928 429 207 103 46 chr10 109835887 109836112 -30480653 - MER106B DNA MER1_type 0 1059 3 478 334 140 31 chr10 109836143 109836565 -30480200 + L2 LINE L2 2462 2929 -385 2007 134 0 0 chr10 109836784 109837101 -30479664 - AluSq SINE Alu 0 317 1 294 292 0 62 chr10 109837127 109837223 -30479542 + L2 LINE L2 3179 3268 -4 400 182 112 49 chr10 109837358 109837501 -30479264 - L1M4 LINE L1 -2922 3224 3073 629 322 91 14 chr10 109837559 109837988 -30478777 + LTR33A LTR ERVL 62 523 0 366 217 11 22 chr10 109838351 109838443 -30478322 - MER5A DNA MER1_type -90 99 9 1820 142 4 0 chr10 109838519 109838793 -30477972 - AluSx SINE Alu -13 299 25 2045 122 135 23 chr10 109839149 109839534 -30477231 + MSTA LTR MaLR 1 428 0 318 330 28 0 chr10 109839580 109839686 -30477079 - MIR SINE MIR -73 189 81 423 307 92 36 chr10 109840244 109840495 -30476270 - L2 LINE L2 0 3313 3049 357 340 26 52 chr10 109840549 109840817 -30475948 - MIR SINE MIR 0 262 2 747 301 51 94 chr10 109840856 109841484 -30475281 + L3 LINE CR1 456 1056 -521 1141 207 20 128 chr10 109841504 109841640 -30475125 + MLT1A1 LTR MaLR 3 152 -213 7925 11 0 0 chr10 109841640 109842561 -30474204 + L1PA2 LINE L1 5231 6151 -4 1141 207 20 128 chr10 109842561 109842829 -30473936 + MLT1A1 LTR MaLR 152 363 -2 225 286 56 112 chr10 109842829 109843025 -30473740 + L3 LINE CR1 1068 1252 -325 304 297 11 11 chr10 109843120 109843211 -30473554 - MIR SINE MIR -93 169 79 306 321 189 20 chr10 109843343 109843539 -30473226 - MIR SINE MIR -26 236 8 292 330 21 0 chr10 109845040 109845137 -30471628 - MIR3 SINE MIR -1 207 109 180 340 0 0 chr10 109846098 109846145 -30470620 - L2 LINE L2 -16 3256 3210 553 290 93 29 chr10 109846291 109846601 -30470164 - LTR33 LTR ERVL -173 348 19 330 294 11 0 chr10 109846605 109846697 -30470068 + MIR SINE MIR 156 248 -14 314 78 78 0 chr10 109896848 109896899 -30419866 + MLT2A2 LTR ERVL 399 453 0 263 381 47 34 chr10 109897271 109897507 -30419258 + MIR SINE MIR 24 262 0 327 280 100 0 chr10 109897910 109898010 -30418755 + L2 LINE L2 3204 3313 0 1988 132 0 7 chr10 109898315 109898618 -30418147 + AluSg SINE Alu 1 301 -9 342 350 56 77 chr10 109899297 109899634 -30417131 - L2 LINE L2 0 3272 2943 2294 135 23 3 chr10 109900123 109900471 -30416294 - THE1B LTR MaLR 0 364 10 893 227 23 9 chr10 109901070 109901286 -30415479 - Charlie1 DNA MER1_type -200 2561 2343 576 154 0 0 chr10 109901473 109901577 -30415188 + CT-rich Low_complexity Low_complexity 3 106 0 1215 182 27 16 chr10 109903491 109903749 -30413016 + L1MB1 LINE L1 5907 6167 -1 273 210 0 0 chr10 109903817 109903879 -30412886 + (CA)n Simple_repeat Simple_repeat 2 63 0 212 254 68 0 chr10 109904215 109904274 -30412491 - L2 LINE L2 -1 3271 3209 205 209 47 0 chr10 109904343 109904386 -30412379 + L3 LINE CR1 1530 1574 -3 22 56 0 0 chr10 109904790 109904826 -30411939 + AT_rich Low_complexity Low_complexity 1 36 0 519 290 40 96 chr10 109906092 109906364 -30410401 + MIR SINE MIR 2 258 -4 256 203 0 58 chr10 109906384 109906453 -30410312 + L2 LINE L2 3166 3230 -83 236 284 60 0 chr10 109906536 109906603 -30410162 - MER5A DNA MER1_type -77 112 42 2190 129 0 0 chr10 109907428 109907738 -30409027 + AluSx SINE Alu 1 310 -2 309 26 0 0 chr10 109908260 109908298 -30408467 + (TG)n Simple_repeat Simple_repeat 1 38 0 31 0 0 0 chr10 109908341 109908372 -30408393 + AT_rich Low_complexity Low_complexity 1 31 0 219 319 21 11 chr10 109908765 109908859 -30407906 - MIR3 SINE MIR -38 170 76 1897 105 4 15 chr10 109910616 109910883 -30405882 + AluSp SINE Alu 50 313 0 4661 190 29 21 chr10 109910884 109912037 -30404728 - L1P LINE L1 -738 5428 4268 4296 134 11 16 chr10 109912037 109912739 -30404026 + L1PA16 LINE L1 5459 6157 -9 24 32 0 0 chr10 109913662 109913693 -30403072 + AT_rich Low_complexity Low_complexity 1 31 0 42 36 0 0 chr10 109913718 109913774 -30402991 + AT_rich Low_complexity Low_complexity 1 56 0 4737 159 63 9 chr10 109913815 109914709 -30402056 - L1MC1 LINE L1 -14 6319 5378 1444 143 39 0 chr10 109914719 109914949 -30401816 + Tigger3(Golem) DNA MER2_type 2791 3029 0 864 122 94 6 chr10 109914954 109915134 -30401631 - L1MCa LINE L1 -4383 2043 1848 * 1851 161 18 47 chr10 109915131 109915160 -30401605 - L1MA7 LINE L1 -134 6157 6129 2121 129 45 25 chr10 109915160 109915517 -30401248 - THE1B LTR MaLR 0 364 1 1851 161 18 47 chr10 109915517 109915873 -30400892 - L1MA7 LINE L1 -162 6129 5783 2030 143 140 8 chr10 109915911 109916282 -30400483 - MSTA LTR MaLR 0 428 9 201 39 0 0 chr10 109916290 109916316 -30400449 + (TA)n Simple_repeat Simple_repeat 1 26 0 2572 171 21 32 chr10 109916316 109917084 -30399681 - L1MA7 LINE L1 -512 5779 5021 7102 178 66 24 chr10 109917084 109917601 -30399164 - L1MCa LINE L1 -4602 1824 1330 345 47 0 0 chr10 109917601 109917644 -30399121 + (TTG)n Simple_repeat Simple_repeat 2 44 0 7102 178 66 24 chr10 109917644 109918010 -30398755 - L1MCa LINE L1 -5096 1330 981 221 0 35 0 chr10 109918010 109918039 -30398726 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7102 178 66 24 chr10 109918039 109918797 -30397968 - L1MCa LINE L1 -5445 981 20 23 54 0 0 chr10 109919021 109919058 -30397707 + AT_rich Low_complexity Low_complexity 1 37 0 2565 33 0 3 chr10 109919234 109919541 -30397224 - L1PA3 LINE L1 -5 6150 5845 366 39 20 0 chr10 109919897 109919948 -30396817 - MLT2A2 LTR ERVL -399 54 3 20810 71 13 7 chr10 109919950 109922644 -30394121 - HERVL-A2 LTR ERVL 0 5654 2946 14101 196 19 34 chr10 109922640 109924865 -30391900 - HERVL-A2 LTR ERVL -3013 2751 575 * 1686 77 165 0 chr10 109924865 109925125 -30391640 - AluSp SINE Alu 0 303 1 14101 196 19 34 chr10 109925125 109925691 -30391074 - HERVL-A2 LTR ERVL -5189 575 2 341 80 40 0 chr10 109925692 109925742 -30391023 - MLT2A2 LTR ERVL 0 453 402 1421 250 117 30 chr10 109925818 109926719 -30390046 - L1M4 LINE L1 -1437 4709 3731 1224 255 182 43 chr10 109927369 109927969 -30388796 + LTR50 LTR ERVL 1 713 -82 2243 123 0 0 chr10 109927969 109928277 -30388488 - AluSg SINE Alu -2 308 1 1224 255 182 43 chr10 109928277 109928374 -30388391 + LTR50 LTR ERVL 713 795 0 2251 82 0 0 chr10 109929514 109929818 -30386947 - AluSg SINE Alu 0 304 1 1361 171 87 47 chr10 109929858 109930156 -30386609 - AluJb SINE Alu 0 312 3 23 0 0 0 chr10 109930311 109930334 -30386431 + AT_rich Low_complexity Low_complexity 1 23 0 54 62 0 0 chr10 109930950 109931046 -30385719 + AT_rich Low_complexity Low_complexity 1 96 0 23 33 0 0 chr10 109931243 109931273 -30385492 + AT_rich Low_complexity Low_complexity 1 30 0 446 394 41 0 chr10 109931813 109931983 -30384782 + MER91A DNA MER1_type 19 195 -1 186 43 0 0 chr10 109932812 109932835 -30383930 + (GA)n Simple_repeat Simple_repeat 2 24 0 587 181 139 0 chr10 109933970 109934114 -30382651 + MER96B DNA MER1_type? 254 417 0 874 254 83 32 chr10 109934314 109934748 -30382017 - L1MEc LINE L1 -4920 1476 1021 295 328 30 99 chr10 109934762 109934926 -30381839 + L2 LINE L2 2847 2992 -321 534 232 18 0 chr10 109934926 109935038 -30381727 - MER81 DNA DNA 0 114 1 295 328 30 99 chr10 109935038 109935105 -30381660 + L2 LINE L2 2992 3062 -251 1032 268 126 12 chr10 109935247 109935668 -30381097 + L1MC/D LINE L1 5264 5732 -2076 297 242 35 97 chr10 109936071 109936095 -30380670 - MIR SINE MIR -7 201 177 1602 175 18 4 chr10 109936095 109936412 -30380353 + AluJo SINE Alu 1 321 0 297 242 35 97 chr10 109936412 109936559 -30380206 - MIR SINE MIR -31 177 53 4588 187 37 23 chr10 109936967 109938374 -30378391 - L1MA9 LINE L1 0 6312 4883 232 192 19 19 chr10 109938678 109938730 -30378035 + CT-rich Low_complexity Low_complexity 1 52 0 249 307 99 20 chr10 109939004 109939105 -30377660 + MIR SINE MIR 32 140 -68 3768 237 71 46 chr10 109939599 109940713 -30376052 - L1MD2 LINE L1 -294 6065 4980 213 39 0 0 chr10 109940713 109940739 -30376026 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3768 237 71 46 chr10 109940739 109941069 -30375696 - L1MD2 LINE L1 -1379 4980 4660 2212 106 0 0 chr10 109941069 109941383 -30375382 - AluSx SINE Alu 0 314 1 3768 237 71 46 chr10 109941383 109942181 -30374584 - L1MD2 LINE L1 -1699 4660 3759 700 261 35 39 chr10 109942193 109942504 -30374261 - L1MD2 LINE L1 -2569 3577 3268 530 289 65 33 chr10 109942713 109943049 -30373716 + L1ME LINE L1 5374 5720 -450 298 335 22 17 chr10 109943327 109943506 -30373259 - HERV16 LTR ERVL -113 4883 4704 2223 345 64 18 chr10 109944412 109944595 -30372170 - HERV16 LTR ERVL -1457 4197 4024 4910 143 12 6 chr10 109944595 109945258 -30371507 - L1PA16 LINE L1 0 6166 5509 1591 136 0 133 chr10 109945258 109945588 -30371177 - AluSx SINE Alu -25 287 2 4910 143 12 6 chr10 109945588 109946576 -30370189 - L1PA16 LINE L1 -657 5509 4504 2223 345 64 18 chr10 109946576 109948148 -30368617 - HERV16 LTR ERVL -1630 4024 2330 6451 158 33 22 chr10 109948189 109950319 -30366446 - L1MA8 LINE L1 -5 6286 4129 757 310 76 44 chr10 109950329 109950488 -30366277 - HERV16 LTR ERVL -3334 2320 2168 929 205 17 132 chr10 109950488 109950897 -30365868 - MLT1A1 LTR MaLR -3 362 1 757 310 76 44 chr10 109950897 109951173 -30365592 - HERV16 LTR ERVL -3486 2168 1871 1014 343 52 47 chr10 109951212 109951776 -30364989 - HERV16 LTR ERVL -3413 1583 1155 1507 244 25 69 chr10 109952017 109952651 -30364114 - L1M4 LINE L1 -2060 4086 3481 444 191 0 0 chr10 109952655 109952744 -30364021 + (CATA)n Simple_repeat Simple_repeat 3 91 0 407 283 33 57 chr10 109952744 109952988 -30363777 - L1M4 LINE L1 -2673 3473 3236 9606 137 24 8 chr10 109953036 109954595 -30362170 + Tigger1 DNA MER2_type 835 2418 0 208 304 18 0 chr10 109955780 109955836 -30360929 + L2 LINE L2 3250 3306 -7 238 229 98 0 chr10 109956116 109956177 -30360588 - MIR SINE MIR -60 148 82 344 300 23 31 chr10 109956301 109956431 -30360334 - MIR3 SINE MIR -5 203 75 22 56 0 0 chr10 109956556 109956592 -30360173 + AT_rich Low_complexity Low_complexity 1 36 0 214 162 0 0 chr10 109957291 109957328 -30359437 + (TG)n Simple_repeat Simple_repeat 1 37 0 896 262 99 34 chr10 109957869 109958020 -30358745 - HsTC2a DNA Tc2 -1207 691 551 189 0 0 0 chr10 109958020 109958041 -30358724 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 896 262 99 34 chr10 109958041 109958305 -30358460 - HsTC2a DNA Tc2 -1347 551 249 1811 53 0 0 chr10 109958357 109958582 -30358183 - L1PA3 LINE L1 -3 6152 5928 498 229 8 107 chr10 109958582 109958805 -30357960 - HsTC2a DNA Tc2 -506 238 82 2410 88 3 0 chr10 109959987 109960315 -30356450 - L1PA10 LINE L1 0 6168 5840 913 66 22 7 chr10 109960316 109960453 -30356312 + L1PA10 LINE L1 5701 5839 -322 439 266 13 19 chr10 109960917 109961075 -30355690 - MER103 DNA DNA 0 166 10 315 264 56 8 chr10 109961089 109961214 -30355551 + LTR33 LTR ERVL 373 503 -18 3730 121 6 6 chr10 109961487 109962014 -30354751 + MER1A DNA MER1_type 1 527 0 238 293 26 26 chr10 109962892 109963008 -30353757 - MLT1J2 LTR MaLR -250 200 85 213 154 0 0 chr10 109963238 109963277 -30353488 + (TG)n Simple_repeat Simple_repeat 2 40 0 510 316 6 12 chr10 109963707 109963875 -30352890 - MIR SINE MIR 0 262 96 362 317 54 54 chr10 109964331 109964517 -30352248 + MIR SINE MIR 76 261 -1 348 24 0 0 chr10 109964535 109964576 -30352189 + (CAT)n Simple_repeat Simple_repeat 1 41 0 366 23 0 0 chr10 109965310 109965353 -30351412 + (CA)n Simple_repeat Simple_repeat 1 43 0 282 314 46 69 chr10 109965417 109965592 -30351173 - L2 LINE L2 -120 3152 2982 26 30 0 0 chr10 109965629 109965662 -30351103 + AT_rich Low_complexity Low_complexity 1 33 0 498 337 73 35 chr10 109965808 109966071 -30350694 - L2 LINE L2 -549 2765 2480 294 29 0 0 chr10 109966071 109966106 -30350659 + (TG)n Simple_repeat Simple_repeat 1 35 0 498 337 73 35 chr10 109966106 109966240 -30350525 - L2 LINE L2 -834 2480 2353 204 179 39 0 chr10 109966968 109967046 -30349719 + (TAA)n Simple_repeat Simple_repeat 3 83 0 211 206 44 0 chr10 109967064 109967132 -30349633 + (TAA)n Simple_repeat Simple_repeat 1 71 0 483 288 31 58 chr10 109967160 109967386 -30349379 - MIR SINE MIR -2 260 41 697 141 0 0 chr10 109967436 109967535 -30349230 + AluJ/FLAM SINE Alu 1 99 -213 378 0 0 0 chr10 109967544 109967586 -30349179 + (CA)n Simple_repeat Simple_repeat 2 43 0 543 333 50 0 chr10 109967611 109967812 -30348953 - MIR SINE MIR -37 225 15 333 0 0 0 chr10 109968752 109968789 -30347976 + (CA)n Simple_repeat Simple_repeat 2 38 0 216 336 56 40 chr10 109968866 109968991 -30347774 - L2 LINE L2 -1 3271 3145 311 294 9 37 chr10 109969127 109969236 -30347529 + MIR SINE MIR 50 155 -107 184 333 18 0 chr10 109969289 109969346 -30347419 - L2 LINE L2 -218 3054 2997 227 308 144 10 chr10 109970811 109970915 -30345850 - MIR3 SINE MIR -49 159 42 231 340 43 11 chr10 109971649 109971743 -30345022 - MIR SINE MIR -95 113 17 342 355 0 0 chr10 109971883 109971993 -30344772 + MIR SINE MIR 51 160 -102 24 0 0 0 chr10 109971996 109972020 -30344745 + AT_rich Low_complexity Low_complexity 1 24 0 194 284 0 54 chr10 109972093 109972167 -30344598 + L2 LINE L2 3244 3313 0 360 0 0 0 chr10 109972635 109972675 -30344090 + (TTA)n Simple_repeat Simple_repeat 3 42 0 11813 33 1 0 chr10 109972676 109974843 -30341922 - L1PA4 LINE L1 -19 6136 3969 227 242 45 15 chr10 109974954 109975020 -30341745 - MIR SINE MIR -87 175 108 29749 50 3 7 chr10 109975057 109979017 -30337748 - L1P LINE L1 -2199 3947 3 729 284 69 23 chr10 109979582 109979885 -30336880 - L2 LINE L2 0 3313 2997 4108 143 35 30 chr10 109979934 109980393 -30336372 - L1PA16 LINE L1 -9 6157 5702 3346 82 13 9 chr10 109980393 109980844 -30335921 + MLT2A2 LTR ERVL 1 453 0 4108 143 35 30 chr10 109980844 109981150 -30335615 - L1PA16 LINE L1 -464 5702 5399 2622 49 0 0 chr10 109981150 109981455 -30335310 - AluY SINE Alu -6 305 1 4108 143 35 30 chr10 109981455 109981864 -30334901 - L1PA16 LINE L1 -767 5399 4915 815 177 51 6 chr10 109983396 109983571 -30333194 - MER20 DNA MER1_type -5 214 32 310 287 77 43 chr10 109984174 109984383 -30332382 - MIR SINE MIR -10 252 37 269 370 34 90 chr10 109984410 109984535 -30332230 - L2 LINE L2 -10 3262 3131 351 35 53 0 chr10 109984535 109984592 -30332173 + (TA)n Simple_repeat Simple_repeat 1 60 0 269 370 34 90 chr10 109984592 109984820 -30331945 - L2 LINE L2 -141 3131 2929 365 259 148 9 chr10 109985375 109985483 -30331282 - MER5A DNA MER1_type -1 188 66 314 223 33 0 chr10 109985631 109985752 -30331013 + (TA)n Simple_repeat Simple_repeat 2 126 0 247 282 43 77 chr10 109985810 109985927 -30330838 + MER5B DNA MER1_type 65 177 -1 324 193 29 14 chr10 109986967 109987110 -30329655 + GA-rich Low_complexity Low_complexity 1 145 0 430 292 77 5 chr10 109987559 109987754 -30329011 + LTR33 LTR ERVL 2 210 -311 468 200 26 17 chr10 109987886 109988001 -30328764 + LTR33 LTR ERVL 387 502 -19 2088 115 0 3 chr10 109988583 109988871 -30327894 - AluSg SINE Alu -23 287 1 198 220 0 0 chr10 109988875 109988934 -30327831 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 224 325 134 13 chr10 109989381 109989538 -30327227 + MIR SINE MIR 37 212 -50 231 288 54 27 chr10 109990087 109990198 -30326567 - L3 LINE CR1 -202 1375 1262 392 307 47 54 chr10 109990952 109991198 -30325567 - MIR SINE MIR -15 247 6 234 212 24 12 chr10 109991691 109991776 -30324989 + GA-rich Low_complexity Low_complexity 2 87 0 426 20 0 0 chr10 109992709 109992760 -30324005 + (TG)n Simple_repeat Simple_repeat 2 52 0 498 284 64 83 chr10 109992980 109993402 -30323363 - MLT1J2 LTR MaLR 0 450 37 1078 177 28 0 chr10 109993742 109993957 -30322808 - MLT1B LTR MaLR -169 221 1 609 280 127 13 chr10 109994738 109994974 -30321791 - MLT1J2 LTR MaLR -119 331 69 223 261 145 0 chr10 109995023 109995092 -30321673 + MIR SINE MIR 179 257 -5 2701 45 0 3 chr10 109996640 109996952 -30319813 + AluY SINE Alu 1 311 0 1189 159 39 5 chr10 109997062 109997270 -30319495 - MER20 DNA MER1_type -3 216 2 243 311 22 44 chr10 109998719 109998809 -30317956 - MIR SINE MIR -100 108 21 207 0 0 0 chr10 109999031 109999054 -30317711 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 467 259 86 10 chr10 109999610 109999807 -30316958 + MER102b DNA MER1_type 94 305 -36 216 0 0 0 chr10 110000124 110000148 -30316617 + (CACAG)n Simple_repeat Simple_repeat 1 24 0 342 277 0 20 chr10 110000726 110000827 -30315938 - L1MC5 LINE L1 -50 7911 7813 429 229 60 42 chr10 110001197 110001363 -30315402 - L1MC5 LINE L1 -522 7439 7271 596 300 75 80 chr10 110002378 110002765 -30314000 - L2 LINE L2 0 3272 2888 2326 184 12 0 chr10 110004123 110004536 -30312229 + MER47B DNA MER2_type 1 418 0 198 216 0 0 chr10 110005137 110005174 -30311591 + MIR SINE MIR 156 192 -70 2355 97 0 16 chr10 110005961 110006271 -30310494 - AluSx SINE Alu -7 305 1 650 184 86 97 chr10 110006314 110006698 -30310067 - LTR48 LTR ERV1 0 787 281 24 0 0 0 chr10 110006727 110006751 -30310014 + AT_rich Low_complexity Low_complexity 1 24 0 595 231 0 0 chr10 110006752 110006869 -30309896 - FRAM SINE Alu -26 150 34 1485 149 53 7 chr10 110006869 110007150 -30309615 - LTR48 LTR ERV1 -493 294 1 2153 178 108 100 chr10 110007326 110007891 -30308874 - LTR8A LTR ERV1 0 727 153 2347 159 24 17 chr10 110007891 110008313 -30308452 - MER61B LTR ERV1 0 425 1 2153 178 108 100 chr10 110008313 110008466 -30308299 - LTR8A LTR ERV1 -574 153 3 225 279 16 16 chr10 110011663 110011724 -30305041 + L2 LINE L2 3212 3272 0 255 173 0 0 chr10 110012031 110012083 -30304682 + (CA)n Simple_repeat Simple_repeat 1 52 0 322 132 22 59 chr10 110013332 110013468 -30303297 + (TA)n Simple_repeat Simple_repeat 1 131 0 247 164 0 68 chr10 110013475 110013548 -30303217 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 387 149 0 71 chr10 110013552 110013720 -30303045 + (TA)n Simple_repeat Simple_repeat 2 157 0 351 0 0 0 chr10 110013760 110013799 -30302966 + (TA)n Simple_repeat Simple_repeat 1 39 0 514 321 60 12 chr10 110013993 110014242 -30302523 - MIR SINE MIR 0 262 2 885 323 97 27 chr10 110014919 110015700 -30301065 - L2 LINE L2 0 3313 2469 386 299 27 54 chr10 110015895 110016042 -30300723 + MIR3 SINE MIR 51 193 -15 360 298 67 67 chr10 110017157 110017395 -30299370 + L3 LINE CR1 826 1063 -514 323 355 99 7 chr10 110017738 110017890 -30298875 + MIR SINE MIR 21 186 -76 648 299 20 53 chr10 110018957 110019201 -30297564 + MIR SINE MIR 24 259 -3 285 235 0 47 chr10 110020434 110020519 -30296246 + GA-rich Low_complexity Low_complexity 1 81 0 869 284 198 18 chr10 110020596 110021078 -30295687 - L2 LINE L2 0 3313 2744 307 299 66 55 chr10 110021100 110021374 -30295391 + L1M4 LINE L1 2679 2955 -3191 761 273 89 68 chr10 110021453 110021881 -30294884 + MLT1J2 LTR MaLR 1 437 -13 1341 242 61 79 chr10 110023049 110023557 -30293208 + MLT1H1 LTR MaLR 1 499 -56 658 279 103 52 chr10 110023602 110024143 -30292622 + L1M4 LINE L1 2874 3442 -2704 1254 180 26 0 chr10 110024170 110024403 -30292362 - L1MA7 LINE L1 -1242 4904 4666 1990 153 11 63 chr10 110024410 110024793 -30291972 + L1MA7 LINE L1 4936 5298 -941 2429 104 5 13 chr10 110024793 110025168 -30291597 + L1PA13 LINE L1 5789 6160 -3 1990 153 11 63 chr10 110025168 110025353 -30291412 + L1MA7 LINE L1 5298 5491 -748 516 208 0 62 chr10 110025352 110025496 -30291269 + L1PB4 LINE L1 6021 6155 -1 * 3746 173 30 17 chr10 110025507 110026311 -30290454 + L1MA7 LINE L1 5476 6289 -2 232 299 0 0 chr10 110026392 110026459 -30290306 - MER94 DNA DNA -2 132 66 230 311 11 0 chr10 110026684 110026774 -30289991 + L1ME LINE L1 5794 5884 -286 393 310 35 35 chr10 110027056 110027259 -30289506 - MIR SINE MIR 0 262 60 181 344 0 16 chr10 110027538 110027599 -30289166 - MIR SINE MIR -80 182 123 30 45 0 0 chr10 110028036 110028080 -30288685 + AT_rich Low_complexity Low_complexity 1 44 0 299 312 38 70 chr10 110028187 110028373 -30288392 + MIR3 SINE MIR 24 203 -5 23 0 0 0 chr10 110028822 110028845 -30287920 + AT_rich Low_complexity Low_complexity 1 23 0 1417 198 21 25 chr10 110029075 110029358 -30287407 - AluJo SINE Alu -30 282 1 202 205 0 0 chr10 110029816 110029855 -30286910 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 301 292 29 29 chr10 110030035 110030172 -30286593 - MIR SINE MIR 0 262 126 2243 169 45 47 chr10 110030181 110030666 -30286099 + L1MC3 LINE L1 7111 7594 -191 861 136 14 96 chr10 110030666 110030734 -30286031 + L1MC2 LINE L1 6137 6209 -135 1650 232 51 16 chr10 110030734 110031183 -30285582 + MLT1C LTR MaLR 1 465 -2 861 136 14 96 chr10 110031183 110031334 -30285431 + L1MC2 LINE L1 6209 6338 -6 4086 51 4 4 chr10 110031334 110031842 -30284923 - L1PA8 LINE L1 -2 6170 5658 676 166 46 20 chr10 110031848 110031999 -30284766 + L1M4 LINE L1 5422 5576 -608 222 203 25 13 chr10 110032764 110032843 -30283922 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 2778 135 0 25 chr10 110033185 110033623 -30283142 - MSTC LTR MaLR -1 427 1 205 229 42 0 chr10 110033756 110033804 -30282961 + CT-rich Low_complexity Low_complexity 5 54 0 523 350 10 15 chr10 110034209 110034415 -30282350 + MIR SINE MIR 54 258 -4 2654 156 63 34 chr10 110034682 110035219 -30281546 + L1MB8 LINE L1 5565 6117 -61 815 83 0 9 chr10 110035219 110035327 -30281438 + U6 snRNA snRNA 1 107 0 1735 70 0 0 chr10 110035327 110035554 -30281211 + L1PA7 LINE L1 5926 6152 -2 340 104 119 0 chr10 110035606 110035673 -30281092 + L1MB7 LINE L1 6110 6184 0 514 256 8 8 chr10 110035674 110035799 -30280966 - MIR SINE MIR -136 126 2 270 341 70 1 chr10 110036810 110036948 -30279817 + MIR SINE MIR 28 173 -62 192 306 16 16 chr10 110037332 110037394 -30279371 - L2 LINE L2 -8 3264 3203 311 282 137 0 chr10 110038027 110038144 -30278621 - MIR SINE MIR -95 167 35 450 278 9 9 chr10 110038521 110038636 -30278129 + L2 LINE L2 3199 3313 0 427 275 93 48 chr10 110038989 110039241 -30277524 + MIR SINE MIR 3 262 0 244 296 44 0 chr10 110039926 110040015 -30276750 - MIR SINE MIR -64 144 49 746 288 19 19 chr10 110040293 110040508 -30276257 - MIR SINE MIR -1 261 47 207 189 0 0 chr10 110040635 110040672 -30276093 + GA-rich Low_complexity Low_complexity 4 40 0 784 107 8 8 chr10 110041077 110041208 -30275557 + (TTCC)n Simple_repeat Simple_repeat 3 133 0 400 316 26 42 chr10 110041823 110042013 -30274752 - MER5A DNA MER1_type -1 188 2 921 299 125 3 chr10 110042118 110042446 -30274319 - LTR16A LTR ERVL 0 450 83 284 390 140 15 chr10 110042641 110042905 -30273860 + L2 LINE L2 2976 3272 0 323 283 28 28 chr10 110043033 110043139 -30273626 - MER5A DNA MER1_type -22 167 62 187 100 0 33 chr10 110044515 110044545 -30272220 + MER5B DNA MER1_type 25 53 -125 332 291 61 23 chr10 110044554 110044863 -30271902 - MLT1G1 LTR MaLR -2 588 231 248 316 0 26 chr10 110045035 110045111 -30271654 + MER5A DNA MER1_type 80 153 -36 1733 305 73 56 chr10 110045290 110046344 -30270421 + L2 LINE L2 1867 2938 -376 13528 31 1 2 chr10 110046583 110049000 -30267765 + L1PA3 LINE L1 3760 6155 0 958 185 121 96 chr10 110049002 110049315 -30267450 - MLT1B LTR MaLR -25 365 45 500 321 40 22 chr10 110049325 110049549 -30267216 + MER21B LTR ERV1 486 713 -150 1118 145 154 200 chr10 110049697 110050242 -30266523 + MLT2B1 LTR ERVL 1 520 0 21 36 0 0 chr10 110051722 110051750 -30265015 + AT_rich Low_complexity Low_complexity 1 28 0 212 344 16 0 chr10 110052926 110052990 -30263775 - MIR SINE MIR -63 145 81 1557 221 6 15 chr10 110053279 110053610 -30263155 + MER74A LTR ERVL 162 489 -69 1878 102 4 0 chr10 110053611 110053856 -30262909 + AluSq SINE Alu 1 246 -67 21 36 0 0 chr10 110054423 110054451 -30262314 + AT_rich Low_complexity Low_complexity 1 28 0 219 250 26 26 chr10 110055177 110055253 -30261512 + MIR SINE MIR 116 191 -71 1066 87 74 0 chr10 110055257 110055406 -30261359 - L1PA10 LINE L1 -513 5655 5496 1942 62 12 4 chr10 110055406 110055664 -30261101 + L1PA10 LINE L1 5679 5938 -230 214 346 131 8 chr10 110055769 110055899 -30260866 - MIR SINE MIR -86 176 31 1459 249 29 87 chr10 110055928 110056506 -30260259 - MLT1H LTR MaLR -4 545 1 320 352 30 87 chr10 110057859 110058123 -30258642 - L2 LINE L2 -8 3264 3016 2018 153 106 22 chr10 110058148 110058655 -30258110 + MER51A LTR ERV1 1 634 0 1289 113 39 0 chr10 110058760 110058963 -30257802 + L1PA13 LINE L1 5952 6162 -1 913 176 0 12 chr10 110059060 110059230 -30257535 + L1PA15 LINE L1 4488 4655 -1491 4244 161 13 1 chr10 110059231 110060012 -30256753 + L1 LINE L1 4331 5120 -1026 5914 112 18 0 chr10 110060014 110060126 -30256639 + L1PA15 LINE L1 4644 4753 -1412 2673 91 0 30 chr10 110060126 110060499 -30256266 - THE1B LTR MaLR -2 362 1 5914 112 18 0 chr10 110060499 110061877 -30254888 + L1PA15 LINE L1 4753 6160 -5 264 330 85 82 chr10 110062503 110062797 -30253968 - L2 LINE L2 0 3272 2978 755 268 39 46 chr10 110063330 110063529 -30253236 - MLT1J2 LTR MaLR -146 304 106 2265 106 44 33 chr10 110063529 110063889 -30252876 + THE1B LTR MaLR 1 364 0 755 268 39 46 chr10 110063889 110063995 -30252770 - MLT1J2 LTR MaLR -344 106 1 21 0 0 0 chr10 110064020 110064041 -30252724 + AT_rich Low_complexity Low_complexity 1 21 0 5363 83 25 1 chr10 110064995 110065731 -30251034 - L1PA11 LINE L1 -3 6171 5419 198 419 67 18 chr10 110065765 110066092 -30250673 + L3 LINE CR1 35 377 -1200 237 33 0 0 chr10 110066394 110066424 -30250341 + (CA)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr10 110066505 110066531 -30250234 + AT_rich Low_complexity Low_complexity 1 26 0 2138 100 0 28 chr10 110066759 110067078 -30249687 - AluSx SINE Alu -2 310 1 283 324 67 36 chr10 110067472 110067697 -30249068 - L2 LINE L2 -5 3308 3077 556 291 29 34 chr10 110067722 110067928 -30248837 - MIR SINE MIR 0 262 58 284 284 219 7 chr10 110067919 110068074 -30248691 - L2 LINE L2 -248 3065 2878 * 226 411 24 6 chr10 110068369 110068537 -30248228 + L3 LINE CR1 507 677 -900 3617 200 72 21 chr10 110068538 110069791 -30246974 - MER52A LTR ERV1 0 1755 1 227 331 45 13 chr10 110069799 110069953 -30246812 + L3 LINE CR1 685 843 -734 277 289 96 41 chr10 110070102 110070320 -30246445 + L3 LINE CR1 1053 1282 -295 532 306 96 5 chr10 110070388 110070587 -30246178 + Charlie8 DNA MER1_type 46 262 -2155 358 342 70 6 chr10 110070672 110070830 -30245935 + L3 LINE CR1 1307 1474 -103 266 293 9 47 chr10 110071855 110071961 -30244804 + MER5A DNA MER1_type 40 141 -48 2312 204 17 36 chr10 110072719 110073243 -30243522 - MER68 LTR ERV1 -48 514 1 541 198 0 10 chr10 110074403 110074499 -30242266 - FLAM_A SINE Alu -25 117 23 2089 128 0 0 chr10 110074961 110075250 -30241515 - AluSx SINE Alu -21 291 3 316 274 18 67 chr10 110076272 110076436 -30240329 - L2 LINE L2 0 3313 3158 2244 120 125 8 chr10 110076473 110076856 -30239909 + MSTA LTR MaLR 1 428 0 1746 294 81 33 chr10 110077698 110078391 -30238374 + L1M4b LINE L1 101 826 -6033 340 284 39 0 chr10 110078455 110078557 -30238208 - L1MEc LINE L1 -4703 1693 1588 * 901 218 50 29 chr10 110078541 110078821 -30237944 + L1M4b LINE L1 1891 2176 -4783 238 224 0 0 chr10 110078942 110078991 -30237774 - MLT1C LTR MaLR 0 467 419 24268 46 43 3 chr10 110078991 110082088 -30234677 + L1P LINE L1 6 3225 -2921 21 0 0 0 chr10 110082920 110082941 -30233824 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr10 110086325 110086347 -30230418 + (T)n Simple_repeat Simple_repeat 1 22 0 3316 203 25 37 chr10 110086442 110087460 -30229305 - L1ME2 LINE L1 0 6164 5161 2431 278 55 14 chr10 110087656 110088425 -30228340 + MER69 DNA AcHobo 262 1061 -1465 1027 260 74 24 chr10 110088468 110088845 -30227920 + MER69 DNA AcHobo 1749 2144 -382 297 217 0 0 chr10 110088894 110088963 -30227802 + MER69 DNA AcHobo 2420 2488 -38 25 0 0 0 chr10 110089454 110089479 -30227286 + AT_rich Low_complexity Low_complexity 1 25 0 325 312 131 27 chr10 110090180 110090478 -30226287 + L2 LINE L2 2953 3281 -32 254 287 62 54 chr10 110091366 110091495 -30225270 + MIR3 SINE MIR 13 142 -66 2191 121 0 0 chr10 110091562 110091867 -30224898 - AluY SINE Alu -6 305 1 686 307 129 42 chr10 110091887 110092657 -30224108 + L2 LINE L2 2480 3313 0 27 49 0 0 chr10 110094047 110094088 -30222677 + AT_rich Low_complexity Low_complexity 1 41 0 907 164 7 0 chr10 110094185 110094331 -30222434 + FRAM SINE Alu 1 146 -30 24 0 0 0 chr10 110094331 110094355 -30222410 + AT_rich Low_complexity Low_complexity 1 24 0 1897 126 65 0 chr10 110094393 110094686 -30222079 - AluSx SINE Alu 0 312 1 856 300 42 4 chr10 110096510 110096750 -30220015 + LTR16A LTR ERVL 88 336 -114 32 67 0 0 chr10 110096848 110096908 -30219857 + AT_rich Low_complexity Low_complexity 1 60 0 205 200 0 0 chr10 110097823 110097863 -30218902 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1236 244 38 5 chr10 110098771 110099106 -30217659 + L1ME3A LINE L1 5703 6053 -117 550 72 12 0 chr10 110099106 110099189 -30217576 - L1PA13 LINE L1 -3 6160 6077 1236 244 38 5 chr10 110099189 110099222 -30217543 + L1ME3A LINE L1 6053 6083 -87 1138 215 116 17 chr10 110099835 110100004 -30216761 + MER2 DNA MER2_type 24 175 -170 2283 93 0 20 chr10 110100004 110100304 -30216461 + AluSg SINE Alu 1 294 -16 1138 215 116 17 chr10 110100304 110100427 -30216338 + MER2 DNA MER2_type 175 345 0 502 69 39 10 chr10 110100453 110100555 -30216210 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 28 79 0 0 chr10 110100797 110100860 -30215905 + AT_rich Low_complexity Low_complexity 1 63 0 528 258 96 79 chr10 110100904 110101690 -30215075 + L1ME3A LINE L1 871 1636 -4579 * 831 262 100 40 chr10 110101657 110102306 -30214459 + L1ME3A LINE L1 4750 5437 -778 378 42 0 0 chr10 110102307 110102355 -30214410 + (CA)n Simple_repeat Simple_repeat 1 48 0 230 71 0 24 chr10 110102458 110102500 -30214265 + (TC)n Simple_repeat Simple_repeat 2 42 0 389 183 0 0 chr10 110102501 110102561 -30214204 - AluJ/FRAM SINE Alu -14 288 229 291 213 187 77 chr10 110102562 110102717 -30214048 + L1ME3A LINE L1 5536 5707 -532 419 217 57 26 chr10 110102764 110102958 -30213807 - LTR16C LTR ERVL -104 387 141 1314 267 36 46 chr10 110103098 110103619 -30213146 + L1ME3A LINE L1 5681 6196 -43 2248 104 0 10 chr10 110104597 110104905 -30211860 - AluSg SINE Alu -5 305 1 2146 125 0 13 chr10 110104917 110105220 -30211545 - AluSx SINE Alu -13 299 1 1643 55 0 20 chr10 110105908 110106133 -30210632 + AluY SINE Alu 87 307 0 1845 204 143 2 chr10 110106241 110106673 -30210092 + MER67D LTR ERV1 22 514 0 2049 100 0 75 chr10 110107190 110107511 -30209254 + AluSx SINE Alu 1 297 -15 267 270 250 10 chr10 110107524 110107624 -30209141 + L2 LINE L2 3182 3305 -8 2074 103 38 3 chr10 110108027 110108318 -30208447 - AluSp SINE Alu -12 301 1 469 310 119 42 chr10 110108427 110108998 -30207767 - MLT1L LTR MaLR 0 615 1 780 264 61 0 chr10 110109008 110109220 -30207545 - MIR SINE MIR -2 260 36 298 289 35 0 chr10 110109965 110110079 -30206686 + L1MC4 LINE L1 7924 8041 -1 1279 151 109 74 chr10 110110890 110111267 -30205498 - MLT1B LTR MaLR 0 390 1 25 0 0 0 chr10 110111526 110111551 -30205214 + AT_rich Low_complexity Low_complexity 1 25 0 958 184 30 40 chr10 110111581 110111782 -30204983 + AluJo SINE Alu 1 199 -113 351 161 0 0 chr10 110111835 110111897 -30204868 + MER53 DNA DNA 127 188 -1 1620 216 26 40 chr10 110112297 110112718 -30204047 + MLT1C LTR MaLR 2 416 -51 477 150 0 0 chr10 110112718 110112798 -30203967 + L1PA16 LINE L1 5895 5974 -192 1978 154 3 0 chr10 110112798 110113091 -30203674 + AluSx SINE Alu 1 294 -18 1128 146 21 12 chr10 110113107 110113314 -30203451 + L1PA16 LINE L1 5946 6157 -3 410 134 0 16 chr10 110113319 110113391 -30203374 + MLT1C LTR MaLR 320 467 0 22 35 0 0 chr10 110114694 110114723 -30202042 + AT_rich Low_complexity Low_complexity 1 29 0 314 306 40 8 chr10 110115080 110115204 -30201561 + L2 LINE L2 1302 1429 -1885 1243 239 49 69 chr10 110115237 110115727 -30201038 + MLT1D LTR MaLR 1 480 -25 214 177 48 16 chr10 110115779 110115841 -30200924 + (CAAAC)n Simple_repeat Simple_repeat 3 66 0 411 330 117 20 chr10 110115879 110116231 -30200534 + L2 LINE L2 1711 2096 -1218 433 301 26 0 chr10 110116281 110116434 -30200331 - LTR33A LTR ERVL -4 519 363 481 320 76 24 chr10 110116443 110116771 -30199994 + L2 LINE L2 2262 2606 -708 343 294 59 48 chr10 110117395 110117572 -30199193 + L2 LINE L2 3125 3306 -7 1695 174 3 7 chr10 110117572 110117859 -30198906 + AluJo SINE Alu 1 286 -26 1025 142 26 0 chr10 110118708 110118863 -30197902 - AluJ SINE Alu -18 294 136 1062 129 60 129 chr10 110118968 110119316 -30197449 - L1MC3 LINE L1 -1 7784 7461 234 0 0 0 chr10 110119372 110119398 -30197367 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 802 172 0 16 chr10 110119398 110119526 -30197239 - AluJ SINE Alu -186 126 1 327 262 35 76 chr10 110119577 110119722 -30197043 + MLT1J LTR MaLR 108 246 -265 1532 157 16 20 chr10 110119869 110120175 -30196590 - L1MB8 LINE L1 -1 6177 5873 5831 75 52 30 chr10 110120197 110121503 -30195262 + L1PA10 LINE L1 4806 6168 0 1538 178 0 22 chr10 110121527 110121797 -30194968 - AluJo SINE Alu -35 277 14 1173 199 37 0 chr10 110121805 110122046 -30194719 - L1MB8 LINE L1 -296 5888 5639 329 298 35 57 chr10 110122046 110122283 -30194482 + MLT1J LTR MaLR 279 614 -1 584 156 59 39 chr10 110122979 110123138 -30193627 + L1ME1 LINE L1 6032 6161 -5 488 255 9 0 chr10 110123481 110123587 -30193178 - MER81 DNA DNA -1 113 7 189 0 0 0 chr10 110123589 110123610 -30193155 + (T)n Simple_repeat Simple_repeat 1 21 0 301 199 81 81 chr10 110124216 110124352 -30192413 + MIR SINE MIR 113 248 -14 2246 237 62 29 chr10 110124544 110124764 -30192001 - MLT1E1 LTR MaLR -3 651 440 2427 96 0 0 chr10 110124764 110125076 -30191689 - AluSx SINE Alu 0 312 1 2246 237 62 29 chr10 110125076 110125480 -30191285 - MLT1E1 LTR MaLR -214 440 6 244 281 156 24 chr10 110125614 110125781 -30190984 - L2 LINE L2 -667 2647 2459 2102 209 133 6 chr10 110125782 110126285 -30190480 - MLT1F1 LTR MaLR 0 567 1 192 388 43 9 chr10 110126464 110126580 -30190185 - L2 LINE L2 -238 3034 2915 545 191 75 108 chr10 110127849 110128090 -30188675 + MER106A DNA MER1_type 1 233 -3 564 224 8 60 chr10 110128128 110128262 -30188503 + L2 LINE L2 3187 3313 0 227 361 168 17 chr10 110128430 110128776 -30187989 + L2 LINE L2 2856 3253 -19 8854 118 13 2 chr10 110129119 110129511 -30187254 - L1PA10 LINE L1 0 6168 5782 2338 100 3 0 chr10 110129511 110129821 -30186944 - AluY SINE Alu 0 311 1 8854 118 13 2 chr10 110129821 110131596 -30185169 - L1PA10 LINE L1 -386 5782 4000 374 237 61 24 chr10 110131653 110131799 -30184966 - MIR SINE MIR -14 248 98 1987 173 55 0 chr10 110131820 110132166 -30184599 + MLT1A1 LTR MaLR 1 365 0 1316 236 31 6 chr10 110132271 110132597 -30184168 - MER58B DNA MER1_type -7 334 1 204 286 0 36 chr10 110132729 110132785 -30183980 - MIR SINE MIR -162 100 47 620 184 72 7 chr10 110133151 110133303 -30183462 + L1MD3 LINE L1 7834 7995 0 282 185 0 31 chr10 110134015 110134080 -30182685 + HsTC2 DNA Tc2 1 63 -1835 334 180 16 0 chr10 110134094 110134155 -30182610 - FRAM/FAM SINE Alu -106 60 1 1105 155 0 0 chr10 110134185 110134353 -30182412 + FRAM SINE Alu 8 175 -1 410 303 79 59 chr10 110134403 110134693 -30182072 - L1MEd LINE L1 -5494 625 330 261 191 73 0 chr10 110134736 110134804 -30181961 + HsTC2 DNA Tc2 1825 1897 -1 204 306 48 16 chr10 110135798 110135860 -30180905 + MER91A DNA MER1_type 123 186 -10 295 317 29 10 chr10 110136705 110136809 -30179956 - L3 LINE CR1 0 1577 1472 1626 203 32 45 chr10 110136865 110137066 -30179699 + MLT1A2 LTR MaLR 1 196 -178 2047 124 27 46 chr10 110137066 110137437 -30179328 + THE1B LTR MaLR 1 364 0 1626 203 32 45 chr10 110137437 110137614 -30179151 + MLT1A2 LTR MaLR 196 374 0 433 307 112 5 chr10 110137789 110137994 -30178771 + MIR SINE MIR 21 247 -15 25 51 0 0 chr10 110138828 110138867 -30177898 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 110138918 110138939 -30177826 + AT_rich Low_complexity Low_complexity 1 21 0 307 283 83 54 chr10 110139177 110139382 -30177383 + L1ME4a LINE L1 5698 5908 -213 849 287 22 4 chr10 110139731 110139961 -30176804 - MIR SINE MIR -28 234 1 186 43 0 0 chr10 110140326 110140349 -30176416 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 2334 106 141 76 chr10 110140872 110141346 -30175419 + MER41B LTR ERV1 1 505 -130 1275 102 0 0 chr10 110141346 110141513 -30175252 - AluSp SINE Alu -6 307 141 1056 65 0 0 chr10 110141518 110141656 -30175109 + MER41A LTR ERV1 417 554 0 1846 220 65 65 chr10 110142347 110142901 -30173864 + MLT2B3 LTR ERVL 1 554 0 237 222 0 0 chr10 110143863 110143908 -30172857 + (TG)n Simple_repeat Simple_repeat 2 46 0 2044 139 0 0 chr10 110144436 110144724 -30172041 + AluSx SINE Alu 1 288 -24 3677 145 23 29 chr10 110145446 110146103 -30170662 + MER39B LTR ERV1 1 653 0 2335 90 0 3 chr10 110146399 110146700 -30170065 + AluSq SINE Alu 1 300 -13 29 0 0 0 chr10 110147768 110147797 -30168968 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 110149650 110149675 -30167090 + AT_rich Low_complexity Low_complexity 1 25 0 369 322 49 7 chr10 110149693 110149836 -30166929 - MIR SINE MIR -31 231 83 287 333 118 31 chr10 110149869 110150064 -30166701 + MIR SINE MIR 38 249 -13 230 344 67 31 chr10 110150052 110150219 -30166546 - MIR SINE MIR -63 145 17 * 331 307 114 61 chr10 110151991 110152219 -30164546 + HAL1 LINE L1 238 477 -2030 789 254 41 0 chr10 110152238 110152407 -30164358 + MER45A DNA AcHobo 3 178 0 724 250 36 87 chr10 110152678 110152935 -30163830 + HAL1 LINE L1 745 1014 -1493 2703 112 38 35 chr10 110152935 110153285 -30163480 + MSTA LTR MaLR 1 349 -79 194 0 39 0 chr10 110153285 110153311 -30163454 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1890 81 84 19 chr10 110153314 110153575 -30163190 - AluSc SINE Alu -31 278 1 2703 112 38 35 chr10 110153575 110153647 -30163118 + MSTA LTR MaLR 350 428 0 724 250 36 87 chr10 110153647 110153928 -30162837 + HAL1 LINE L1 1014 1352 -1155 729 276 168 28 chr10 110153996 110154420 -30162345 + HAL1 LINE L1 1472 1954 -553 318 296 96 63 chr10 110154506 110154871 -30161894 + HAL1 LINE L1 1996 2372 -135 25 0 0 0 chr10 110154907 110154932 -30161833 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr10 110155749 110155798 -30160967 + AT_rich Low_complexity Low_complexity 1 49 0 269 242 139 91 chr10 110155959 110156124 -30160641 + MIR SINE MIR 20 192 -70 664 269 56 34 chr10 110156247 110156481 -30160284 - MIR SINE MIR 0 262 24 295 58 0 39 chr10 110156665 110156717 -30160048 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 1617 42 0 0 chr10 110156717 110156907 -30159858 - L1PA3 LINE L1 -24 6131 5942 225 154 0 0 chr10 110157102 110157141 -30159624 - MIR3 SINE MIR 0 208 170 263 371 0 0 chr10 110157357 110157454 -30159311 + MIR3 SINE MIR 81 177 -31 233 304 71 48 chr10 110158995 110159163 -30157602 + MER5A DNA MER1_type 14 185 -4 * 728 209 13 26 chr10 110159025 110159178 -30157587 - MER5A DNA MER1_type -35 154 4 205 189 0 0 chr10 110159734 110159771 -30156994 + A-rich Low_complexity Low_complexity 2 38 0 2158 103 14 3 chr10 110160513 110160803 -30155962 + AluSp SINE Alu 1 293 -20 254 333 26 26 chr10 110161035 110161152 -30155613 - MIR SINE MIR -133 129 13 26 64 0 0 chr10 110161243 110161290 -30155475 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr10 110162514 110162541 -30154224 + AT_rich Low_complexity Low_complexity 1 27 0 203 320 139 66 chr10 110162894 110163016 -30153749 + L3b LINE CR1 1450 1580 -3 376 240 214 30 chr10 110163129 110163318 -30153447 - MIR SINE MIR -24 238 13 329 336 154 23 chr10 110163851 110164247 -30152518 - L2 LINE L2 -435 2879 2432 802 191 0 0 chr10 110164257 110164393 -30152372 - FLAM_C SINE Alu -7 136 1 514 168 29 139 chr10 110164539 110164748 -30152017 - MER53 DNA DNA 0 189 4 210 37 0 0 chr10 110164963 110164990 -30151775 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 294 125 19 chr10 110165330 110165755 -30151010 + L1MC/D LINE L1 5369 5849 -390 419 278 123 63 chr10 110166325 110166627 -30150138 + HAL1 LINE L1 848 1167 -1340 24 0 0 0 chr10 110166664 110166688 -30150077 + AT_rich Low_complexity Low_complexity 1 24 0 256 206 15 15 chr10 110166708 110166776 -30149989 + HAL1 LINE L1 1835 1902 -605 2232 118 0 3 chr10 110166811 110167107 -30149658 - AluSq SINE Alu -18 295 1 315 86 29 14 chr10 110167152 110167222 -30149543 + (TAA)n Simple_repeat Simple_repeat 2 72 0 1084 153 5 16 chr10 110167261 110167451 -30149314 - MER57A-int LTR ERV1 -1525 6012 5825 1323 115 0 23 chr10 110167779 110167997 -30148768 - MER57A-int LTR ERV1 -1716 5821 5609 351 0 0 0 chr10 110167997 110168036 -30148729 + (CA)n Simple_repeat Simple_repeat 1 39 0 825 178 38 45 chr10 110168063 110168858 -30147907 - MER57A-int LTR ERV1 -2390 3941 1721 496 217 19 0 chr10 110168975 110169081 -30147684 - MER57A-int LTR ERV1 -2872 3459 3352 1075 163 11 63 chr10 110169140 110169410 -30147355 - MER57A-int LTR ERV1 -2995 3336 3081 435 195 0 51 chr10 110169508 110169653 -30147112 - MER57A-int LTR ERV1 -3681 1294 1096 407 291 76 33 chr10 110169660 110169870 -30146895 - MER34C LTR ERV1 -177 408 190 390 238 25 56 chr10 110169881 110170041 -30146724 - MER57A-int LTR ERV1 -4120 1003 849 401 167 12 12 chr10 110170149 110170233 -30146532 - MER57A-int LTR ERV1 -6695 842 759 574 79 22 0 chr10 110170233 110170322 -30146443 + (TA)n Simple_repeat Simple_repeat 2 92 0 677 202 8 0 chr10 110170333 110170457 -30146308 + FLAM_C SINE Alu 1 125 -8 3146 196 14 58 chr10 110170490 110170755 -30146010 - MER57A-int LTR ERV1 -6795 742 467 2161 110 0 32 chr10 110170755 110170924 -30145841 - AluSg SINE Alu -10 300 144 2444 79 0 3 chr10 110170924 110171227 -30145538 - AluY SINE Alu -9 302 1 2161 110 0 32 chr10 110171227 110171367 -30145398 - AluSg SINE Alu -166 144 1 3146 196 14 58 chr10 110171367 110171877 -30144888 - MER57A-int LTR ERV1 -7070 467 1 2305 152 10 20 chr10 110171877 110172284 -30144481 - MER57A LTR ERV1 0 403 1 2584 272 38 24 chr10 110172284 110172427 -30144338 - L1M4 LINE L1 -1049 5097 4957 198 0 0 0 chr10 110172427 110172449 -30144316 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2584 272 38 24 chr10 110172449 110172627 -30144138 - L1M4 LINE L1 -1189 4957 4783 3986 97 9 0 chr10 110172627 110173176 -30143589 - MER41A LTR ERV1 0 554 1 2584 272 38 24 chr10 110173176 110173546 -30143219 - L1M4 LINE L1 -1363 4783 4419 2286 126 141 58 chr10 110173546 110174093 -30142672 + LTR49 LTR ERV1 4 595 0 2584 272 38 24 chr10 110174093 110174463 -30142302 - L1M4 LINE L1 -1727 4419 4020 212 83 0 28 chr10 110174477 110174513 -30142252 + (TTTC)n Simple_repeat Simple_repeat 1 35 0 5372 108 5 10 chr10 110174513 110175372 -30141393 - L1PA15 LINE L1 0 6165 5303 8379 70 2 6 chr10 110175372 110176447 -30140318 + MER11C LTR ERVK 1 1071 0 5372 108 5 10 chr10 110176447 110177133 -30139632 - L1PA15 LINE L1 -862 5303 4615 11796 192 46 2 chr10 110177135 110179428 -30137337 + L1M1 LINE L1 24 2418 -5147 1116 68 6 6 chr10 110179438 110179601 -30137164 + MER41A LTR ERV1 392 554 0 3042 254 72 17 chr10 110179662 110181760 -30135005 - L1MCb LINE L1 -4352 2393 3 26 0 0 0 chr10 110181790 110181816 -30134949 + AT_rich Low_complexity Low_complexity 1 26 0 207 182 0 0 chr10 110182809 110182842 -30133923 + A-rich Low_complexity Low_complexity 1 33 0 2139 113 3 0 chr10 110185420 110185703 -30131062 + AluSq SINE Alu 1 284 -29 231 157 0 0 chr10 110185719 110185770 -30130995 - LTR66 LTR ERVL -166 444 394 361 278 0 0 chr10 110185774 110185864 -30130901 - L1MC4 LINE L1 -1339 6703 6614 340 270 22 0 chr10 110185784 110185873 -30130892 + L1MC4 LINE L1 6614 6704 -1338 * 605 192 4 81 chr10 110186445 110186716 -30130049 + MER31-int LTR ERV1 1313 1667 -3269 288 268 216 0 chr10 110187648 110187745 -30129020 + L2 LINE L2 3180 3297 -16 225 225 0 0 chr10 110187711 110187751 -30129014 + MIR SINE MIR 219 258 -4 * 185 383 99 6 chr10 110187902 110188064 -30128701 + MIR3 SINE MIR 15 191 -17 1695 190 15 75 chr10 110189352 110189830 -30126935 - L1MA7 LINE L1 -11 6280 5832 213 65 0 0 chr10 110190640 110190671 -30126094 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 206 61 0 30 chr10 110191314 110191347 -30125418 + (CAT)n Simple_repeat Simple_repeat 2 33 0 2305 109 3 0 chr10 110191554 110191865 -30124900 + AluSq SINE Alu 2 313 0 290 167 0 15 chr10 110192000 110192066 -30124699 + CT-rich Low_complexity Low_complexity 4 68 0 313 298 37 9 chr10 110192892 110193010 -30123755 + MIR SINE MIR 53 172 -36 371 365 0 0 chr10 110196688 110196814 -30119951 + L2 LINE L2 3188 3313 0 181 362 17 0 chr10 110198874 110198932 -30117833 + L2 LINE L2 1159 1217 -2097 653 233 15 89 chr10 110199373 110199501 -30117264 - MER5A DNA MER1_type 0 189 80 2296 104 0 22 chr10 110199501 110199817 -30116948 - AluSc SINE Alu 0 309 1 653 233 15 89 chr10 110199817 110199890 -30116875 - MER5A DNA MER1_type -109 80 3 21 0 0 0 chr10 110200190 110200211 -30116554 + AT_rich Low_complexity Low_complexity 1 21 0 1711 197 40 0 chr10 110201408 110201825 -30114940 + AluJo SINE Alu 1 429 0 204 253 81 81 chr10 110201959 110202046 -30114719 + MIR SINE MIR 24 110 -98 218 264 42 14 chr10 110202614 110202686 -30114079 + MIR SINE MIR 117 190 -72 557 303 37 45 chr10 110203614 110203858 -30112907 + MIR SINE MIR 21 262 0 184 313 43 78 chr10 110203903 110204018 -30112747 - L2 LINE L2 -26 3246 3136 653 313 15 5 chr10 110204889 110205084 -30111681 - MIR SINE MIR -47 215 19 236 398 11 0 chr10 110206325 110206418 -30110347 - MIR3 SINE MIR -41 167 74 244 235 0 74 chr10 110206561 110206642 -30110123 + Tigger1 DNA MER2_type 26 100 -2318 2376 99 0 3 chr10 110206642 110206954 -30109811 - AluSx SINE Alu -1 311 1 13217 130 22 34 chr10 110207026 110208839 -30107926 + Tigger1 DNA MER2_type 94 1875 -543 902 160 6 6 chr10 110208839 110208995 -30107770 + L1PB4 LINE L1 6001 6156 0 13217 130 22 34 chr10 110208995 110209532 -30107233 + Tigger1 DNA MER2_type 1875 2417 -1 1548 218 89 34 chr10 110210185 110210658 -30106107 + MLT1D LTR MaLR 3 501 -4 197 356 23 23 chr10 110210776 110210901 -30105864 - MIR SINE MIR -67 141 34 483 311 119 0 chr10 110211439 110211616 -30105149 - MIR SINE MIR -11 251 54 935 163 27 0 chr10 110211632 110211779 -30104986 + FRAM SINE Alu 4 154 -12 403 281 213 45 chr10 110213638 110213832 -30102933 + L2 LINE L2 2429 2589 -724 1661 172 7 17 chr10 110213832 110214129 -30102636 - AluJo SINE Alu -18 294 1 403 281 213 45 chr10 110214129 110214654 -30102111 + L2 LINE L2 2589 3286 -27 653 199 18 17 chr10 110214697 110214992 -30101773 + CT-rich Low_complexity Low_complexity 1 295 0 533 198 13 168 chr10 110215248 110215480 -30101285 + MIR SINE MIR 23 218 -44 2288 76 30 10 chr10 110215481 110215784 -30100981 + AluY SINE Alu 1 309 -2 432 342 75 55 chr10 110216270 110216726 -30100039 + L2 LINE L2 2804 3268 -4 326 172 0 16 chr10 110217509 110217565 -30099200 - MLT1A2 LTR MaLR 0 374 320 1017 104 131 27 chr10 110217565 110217748 -30099017 - MER1B DNA MER1_type 0 339 138 438 20 0 0 chr10 110218060 110218111 -30098654 + (TG)n Simple_repeat Simple_repeat 1 51 0 216 0 0 0 chr10 110218110 110218134 -30098631 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 792 175 13 7 chr10 110218149 110218303 -30098462 - MLT1A2 LTR MaLR -216 158 4 190 341 73 0 chr10 110219048 110219130 -30097635 - L2 LINE L2 -10 3303 3216 339 294 51 40 chr10 110219270 110219447 -30097318 - L2 LINE L2 -25 3288 3110 788 340 190 3 chr10 110219459 110220039 -30096726 - L2 LINE L2 -1735 1579 892 917 236 14 19 chr10 110220263 110220479 -30096286 - MER20 DNA MER1_type -4 215 1 310 304 36 51 chr10 110221777 110221915 -30094850 - MIR SINE MIR -115 147 12 466 315 35 25 chr10 110222541 110222738 -30094027 + MIR SINE MIR 52 250 -12 221 245 0 0 chr10 110224142 110224191 -30092574 - L2 LINE L2 -2 3311 3263 256 341 87 62 chr10 110224229 110224287 -30092478 - L2 LINE L2 -126 3146 3091 1981 116 0 7 chr10 110224287 110224623 -30092142 + AluSq SINE Alu 22 313 0 256 341 87 62 chr10 110224623 110224772 -30091993 - L2 LINE L2 -181 3091 2934 1179 188 52 53 chr10 110225310 110225690 -30091075 - MER67C LTR ERV1 -246 268 1 667 24 0 0 chr10 110225749 110225831 -30090934 + L1PA2 LINE L1 6070 6151 -4 1885 112 69 10 chr10 110225860 110226228 -30090537 + LTR7 LTR ERV1 1 450 0 12205 117 3 38 chr10 110226228 110228841 -30087924 + HERVH LTR ERV1 1 2830 -4883 4032 120 0 5 chr10 110228841 110229481 -30087284 + HERVH LTR ERV1 3357 3993 -3720 6856 131 26 2 chr10 110229519 110230676 -30086089 + HERVH LTR ERV1 3962 5149 -2297 2132 170 14 5 chr10 110230667 110231090 -30085675 + HERVH LTR ERV1 5590 6016 -1697 * 3428 113 7 12 chr10 110231083 110231643 -30085122 + HERVH LTR ERV1 7157 7713 0 1837 115 72 8 chr10 110231643 110232010 -30084755 + LTR7 LTR ERV1 1 450 0 364 284 37 30 chr10 110232064 110232198 -30084567 - LTR16C LTR ERVL -3 488 354 1630 173 67 60 chr10 110232343 110232618 -30084147 + LTR23 LTR ERV1 1 282 -155 618 211 8 30 chr10 110232618 110232751 -30084014 + FLAM_C SINE Alu 2 131 -2 1630 173 67 60 chr10 110232751 110232909 -30083856 + LTR23 LTR ERV1 282 437 0 609 304 54 20 chr10 110233098 110233178 -30083587 - ERVL LTR ERVL -641 5123 5047 1348 166 80 83 chr10 110233178 110233552 -30083213 - MLT1A2 LTR MaLR -1 373 1 609 304 54 20 chr10 110233552 110233767 -30082998 - ERVL LTR ERVL -717 5047 4818 42084 39 1 2 chr10 110233942 110240095 -30076670 + L1PA3 LINE L1 9 6152 -3 224 30 30 0 chr10 110240098 110240131 -30076634 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 984 334 65 32 chr10 110240131 110240789 -30075976 - ERVL LTR ERVL -1063 4591 3912 21 0 0 0 chr10 110241892 110241913 -30074852 + AT_rich Low_complexity Low_complexity 1 21 0 236 396 19 9 chr10 110242818 110242924 -30073841 + L2 LINE L2 3125 3231 -41 428 299 206 34 chr10 110242963 110243167 -30073598 - MIR SINE MIR -10 252 14 667 279 79 4 chr10 110243185 110243425 -30073340 - LTR16C LTR ERVL 0 491 234 2032 153 8 0 chr10 110245076 110245430 -30071335 - L1MB1 LINE L1 -2 6166 5810 1653 174 22 6 chr10 110245460 110245777 -30070988 + L1M3 LINE L1 5476 5797 -371 189 378 90 9 chr10 110246508 110246619 -30070146 + L2 LINE L2 3153 3272 0 21 0 0 0 chr10 110248053 110248074 -30068691 + AT_rich Low_complexity Low_complexity 1 21 0 1163 129 19 29 chr10 110248651 110248860 -30067905 + THE1C LTR MaLR 169 375 0 489 307 31 8 chr10 110248944 110249201 -30067564 + L1MEc LINE L1 1379 1641 -4755 253 0 0 0 chr10 110249319 110249355 -30067410 + L1PA3 LINE L1 6117 6152 -3 1280 275 71 2 chr10 110249434 110249900 -30066865 + LTR33 LTR ERVL 1 498 -23 316 273 107 15 chr10 110249919 110250124 -30066641 - LTR67 LTR ERVL -5 552 329 649 364 21 30 chr10 110250503 110250932 -30065833 - LTR16B LTR ERVL -39 425 1 458 287 86 31 chr10 110251087 110251527 -30065238 - ERVL LTR ERVL -328 5436 4937 522 0 0 0 chr10 110251528 110251586 -30065179 + (TG)n Simple_repeat Simple_repeat 1 58 0 544 308 70 51 chr10 110251739 110251871 -30064894 - ERVL LTR ERVL -1215 4549 4421 677 212 35 59 chr10 110251871 110252041 -30064724 - FRAM SINE Alu 0 166 1 544 308 70 51 chr10 110252041 110252220 -30064545 - ERVL LTR ERVL -1343 4421 4232 360 289 81 61 chr10 110252567 110252764 -30064001 + MIR SINE MIR 53 253 -9 232 89 22 22 chr10 110253130 110253175 -30063590 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 280 262 11 24 chr10 110253175 110253379 -30063386 + MER46C DNA MER2_type 63 313 -25 1746 198 0 6 chr10 110253984 110254298 -30062467 - AluJo SINE Alu 0 312 1 228 246 33 16 chr10 110254458 110254519 -30062246 - MIR SINE MIR -11 251 190 216 204 0 0 chr10 110255136 110255180 -30061585 + A-rich Low_complexity Low_complexity 1 44 0 2236 111 0 13 chr10 110356281 110356597 -29960168 + AluSx SINE Alu 1 312 0 516 287 83 0 chr10 110356713 110356894 -29959871 - L1MC4a LINE L1 -1898 5910 5715 2232 100 0 10 chr10 110357187 110357497 -29959268 - AluSx SINE Alu -5 307 1 248 376 141 16 chr10 110357506 110357761 -29959004 - L2 LINE L2 -1 3312 3026 2027 141 0 3 chr10 110358143 110358447 -29958318 + AluSx SINE Alu 1 303 -9 624 144 0 10 chr10 110358462 110358559 -29958206 + AluJo SINE Alu 39 134 -178 2178 104 3 7 chr10 110358598 110358907 -29957858 + AluSq SINE Alu 2 309 -4 2026 128 0 0 chr10 110358990 110359279 -29957486 + AluSx SINE Alu 1 289 -23 1995 131 7 0 chr10 110359607 110359898 -29956867 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 110359898 110359922 -29956843 + AT_rich Low_complexity Low_complexity 1 24 0 205 163 41 20 chr10 110361535 110361584 -29955181 + C-rich Low_complexity Low_complexity 5 54 0 288 231 99 91 chr10 110362338 110362459 -29954306 + MIR SINE MIR 23 144 -64 700 160 23 15 chr10 110362512 110362643 -29954122 - FLAM_C SINE Alu -10 133 2 250 139 0 0 chr10 110362651 110362687 -29954078 - Alu SINE Alu -266 36 1 1986 132 0 19 chr10 110362692 110363002 -29953763 - AluSx SINE Alu 0 312 9 1926 156 3 3 chr10 110363012 110363320 -29953445 - AluSx SINE Alu -4 308 1 1962 108 52 0 chr10 110363392 110363679 -29953086 + AluSq SINE Alu 1 302 -11 2164 94 0 7 chr10 110363711 110364018 -29952747 - AluSg SINE Alu -5 305 1 1882 131 10 7 chr10 110364081 110364372 -29952393 + AluSx SINE Alu 6 297 -15 2380 81 0 7 chr10 110364765 110365073 -29951692 + AluSp SINE Alu 1 306 -7 2090 114 0 0 chr10 110365638 110365936 -29950829 + AluSx SINE Alu 1 298 -14 345 188 145 34 chr10 110366829 110366946 -29949819 + MER5A DNA MER1_type 34 163 -26 2155 113 0 0 chr10 110366946 110367239 -29949526 - AluSg SINE Alu -17 293 1 215 274 115 57 chr10 110367239 110367279 -29949486 - MER5A DNA MER1_type -152 37 1 184 188 0 0 chr10 110367306 110367338 -29949427 + MIR SINE MIR 112 143 -65 2411 60 3 3 chr10 110367377 110367678 -29949087 - AluSp SINE Alu -12 301 1 2235 102 0 0 chr10 110367729 110368024 -29948741 + AluSx SINE Alu 7 301 -11 738 191 0 54 chr10 110368929 110368963 -29947802 - FLAM_C SINE Alu -172 140 106 1658 109 164 4 chr10 110368963 110369219 -29947546 + AluSc SINE Alu 1 297 -2 738 191 0 54 chr10 110369219 110369331 -29947434 - FLAM_C SINE Alu -206 106 2 770 134 7 35 chr10 110369371 110369513 -29947252 + L1MB5 LINE L1 6004 6141 -33 756 61 0 0 chr10 110369515 110369613 -29947152 + (TTCC)n Simple_repeat Simple_repeat 4 101 0 291 97 11 12 chr10 110369613 110369687 -29947078 + AluSp/q SINE Alu 160 300 -3 2284 77 3 26 chr10 110369687 110369998 -29946767 + AluSp SINE Alu 1 304 -9 1529 169 46 14 chr10 110370288 110370436 -29946329 - AluJb SINE Alu -19 293 151 1921 93 32 11 chr10 110370436 110370743 -29946022 - AluSc SINE Alu 0 309 1 1529 169 46 14 chr10 110370743 110370878 -29945887 - AluJb SINE Alu -161 151 1 676 214 56 0 chr10 110370878 110371004 -29945761 - AluJo SINE Alu -177 135 3 183 80 0 0 chr10 110371031 110371056 -29945709 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 415 329 67 51 chr10 110371056 110371311 -29945454 - L2 LINE L2 0 3272 3014 816 112 22 8 chr10 110372204 110372338 -29944427 + AluSq/x SINE Alu 1 136 -177 2313 80 3 6 chr10 110372338 110372650 -29944115 + AluY SINE Alu 1 311 0 24 0 0 0 chr10 110372865 110372889 -29943876 + AT_rich Low_complexity Low_complexity 1 24 0 640 157 19 19 chr10 110377261 110377369 -29939396 + FLAM_A SINE Alu 21 128 -14 189 264 14 83 chr10 110377381 110377453 -29939312 + MIR3 SINE MIR 113 179 -29 200 227 291 27 chr10 110377564 110377674 -29939091 - MER5A DNA MER1_type 0 189 51 314 44 132 0 chr10 110378636 110378704 -29938061 + GA-rich Low_complexity Low_complexity 4 80 0 191 61 30 0 chr10 110379335 110379368 -29937397 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 519 274 40 2 chr10 110379434 110379586 -29937179 + MIR SINE MIR 12 168 -40 1340 149 24 92 chr10 110379772 110379885 -29936880 + AluSx SINE Alu 1 120 -192 279 0 0 0 chr10 110379885 110379916 -29936849 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1340 149 24 92 chr10 110379916 110380137 -29936628 + AluSx SINE Alu 120 312 0 2014 139 3 3 chr10 110380152 110380462 -29936303 + AluSx SINE Alu 1 310 -2 1923 117 43 0 chr10 110380559 110380840 -29935925 + AluSx SINE Alu 1 293 -19 2188 95 3 3 chr10 110381460 110381755 -29935010 + AluSq SINE Alu 1 295 -18 258 246 0 0 chr10 110381762 110381819 -29934946 + (CA)n Simple_repeat Simple_repeat 1 57 0 1215 111 6 0 chr10 110381906 110382077 -29934688 - AluSg/x SINE Alu -13 297 126 2191 109 0 0 chr10 110382080 110382382 -29934383 - AluSg SINE Alu -8 302 1 729 188 0 8 chr10 110382458 110382586 -29934179 + FLAM_A SINE Alu 11 137 -5 493 147 17 60 chr10 110382595 110382711 -29934054 + L1M4 LINE L1 4974 5084 -1062 633 159 0 0 chr10 110382711 110382818 -29933947 - AluSc SINE Alu -9 300 194 233 297 22 0 chr10 110382951 110383042 -29933723 + L1M4 LINE L1 4992 5084 -1062 2005 123 7 0 chr10 110383042 110383343 -29933422 - AluSx SINE Alu -9 303 1 3060 151 50 37 chr10 110383344 110383373 -29933392 + L1MB8 LINE L1 5556 5583 -593 1934 130 0 53 chr10 110383373 110383695 -29933070 + AluSx SINE Alu 1 305 -7 3060 151 50 37 chr10 110383695 110384352 -29932413 + L1MB8 LINE L1 5583 6176 0 2336 92 0 0 chr10 110384389 110384694 -29932071 + AluSq SINE Alu 1 305 -8 2170 98 0 0 chr10 110384991 110385298 -29931467 - AluSq SINE Alu 0 307 1 192 77 0 0 chr10 110385306 110385332 -29931433 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3455 167 25 38 chr10 110385332 110385580 -29931185 - L1MB2 LINE L1 -11 6160 5910 2255 96 3 6 chr10 110385580 110385894 -29930871 - AluSq SINE Alu 0 313 1 2315 89 0 7 chr10 110385899 110386202 -29930563 - AluSg SINE Alu -9 301 1 3455 167 25 38 chr10 110386202 110386598 -29930167 - L1MB2 LINE L1 -265 5906 5519 316 225 45 0 chr10 110386841 110386930 -29929835 - MIR SINE MIR -56 206 114 242 267 47 35 chr10 110386962 110387048 -29929717 + MIR3 SINE MIR 84 170 -38 2126 100 13 29 chr10 110387629 110387939 -29928826 + AluSx SINE Alu 1 305 -7 436 280 125 36 chr10 110388100 110388379 -29928386 + L2 LINE L2 2932 3235 -78 1593 168 29 39 chr10 110388410 110388720 -29928045 - AluJb SINE Alu -5 307 1 26 30 0 0 chr10 110388781 110388814 -29927951 + AT_rich Low_complexity Low_complexity 1 33 0 726 222 125 0 chr10 110388814 110388990 -29927775 - MIR SINE MIR -14 248 51 2676 26 0 0 chr10 110388995 110389305 -29927460 - AluYb8 SINE Alu -8 310 1 2126 117 0 10 chr10 110389307 110389607 -29927158 - AluSx SINE Alu -14 298 2 1343 149 42 74 chr10 110389633 110389661 -29927104 - Charlie5 DNA MER1_type -1 2623 2596 2143 114 3 0 chr10 110389661 110389960 -29926805 + AluSx SINE Alu 1 300 -12 1343 149 42 74 chr10 110389960 110390066 -29926699 - Charlie5 DNA MER1_type -28 2596 2488 2195 66 3 11 chr10 110390066 110390381 -29926384 + AluSp SINE Alu 1 313 0 1343 149 42 74 chr10 110390381 110390511 -29926254 - Charlie5 DNA MER1_type -136 2488 2372 2246 72 20 0 chr10 110390511 110390692 -29926073 - AluY SINE Alu 0 311 120 351 0 0 0 chr10 110390692 110390731 -29926034 + (TG)n Simple_repeat Simple_repeat 2 40 0 2246 72 20 0 chr10 110390731 110390853 -29925912 - AluY SINE Alu -191 120 2 1343 149 42 74 chr10 110390853 110390988 -29925777 - Charlie5 DNA MER1_type -252 2372 2234 2201 90 0 0 chr10 110390989 110391278 -29925487 - AluSg SINE Alu -9 301 13 483 191 9 26 chr10 110391330 110391351 -29925414 - Charlie5 DNA MER1_type -2503 121 101 2396 41 0 3 chr10 110391351 110391641 -29925124 - AluY SINE Alu -22 289 1 483 191 9 26 chr10 110391641 110391734 -29925031 - Charlie5 DNA MER1_type -2523 101 9 613 187 7 90 chr10 110392156 110392311 -29924454 + MIR SINE MIR 8 149 -113 817 152 0 43 chr10 110392433 110392571 -29924194 + FLAM_A SINE Alu 1 132 -1 2238 93 3 0 chr10 110392870 110393171 -29923594 + AluSp SINE Alu 1 302 -11 250 313 150 12 chr10 110393622 110393782 -29922983 + L2 LINE L2 3121 3302 -11 339 25 0 0 chr10 110394316 110394356 -29922409 + (TG)n Simple_repeat Simple_repeat 2 41 0 2390 72 0 19 chr10 110394480 110394798 -29921967 - AluSx SINE Alu 0 312 1 844 162 65 0 chr10 110394924 110395078 -29921687 - FRAM SINE Alu -20 156 1 222 163 20 20 chr10 110395167 110395216 -29921549 + GA-rich Low_complexity Low_complexity 2 50 0 225 326 156 37 chr10 110395362 110395497 -29921268 + MIR SINE MIR 51 201 -61 872 242 55 0 chr10 110395528 110395748 -29921017 + MIR SINE MIR 8 238 -24 1871 140 14 0 chr10 110395853 110396132 -29920633 + AluSq SINE Alu 16 298 -15 520 290 125 32 chr10 110396807 110397214 -29919551 + MLT1K LTR MaLR 137 581 -7 2361 63 6 13 chr10 110397230 110397545 -29919220 - AluSp SINE Alu 0 313 1 2283 82 10 0 chr10 110397608 110397912 -29918853 + AluSp SINE Alu 3 309 -4 931 91 8 0 chr10 110397976 110398108 -29918657 - FLAM_C SINE Alu 0 133 1 338 268 56 49 chr10 110398403 110398545 -29918220 + MIR SINE MIR 100 242 -20 1574 118 26 0 chr10 110399660 110399888 -29916877 - AluJb SINE Alu -78 234 1 983 229 28 86 chr10 110399921 110400283 -29916482 - L1ME1 LINE L1 -5 6161 5821 1030 124 0 7 chr10 110400283 110400460 -29916305 - AluSg/x SINE Alu 0 306 131 2071 113 0 3 chr10 110400483 110400774 -29915991 + AluSx SINE Alu 1 290 -22 2205 110 0 0 chr10 110400830 110401139 -29915626 - AluSx SINE Alu 0 312 4 1899 166 3 0 chr10 110401139 110401441 -29915324 - AluJb SINE Alu -9 303 1 848 168 51 9 chr10 110401443 110401657 -29915108 - L1ME1 LINE L1 -749 5397 5175 894 277 30 70 chr10 110401925 110402354 -29914411 + MLT1J LTR MaLR 100 511 0 2121 116 0 25 chr10 110402466 110402785 -29913980 - AluSx SINE Alu -1 311 1 23 33 0 0 chr10 110402946 110402976 -29913789 + AT_rich Low_complexity Low_complexity 1 30 0 1316 266 45 25 chr10 110403401 110403447 -29913318 - LTR16B LTR ERVL 0 464 420 243 61 0 0 chr10 110403447 110403480 -29913285 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1316 266 45 25 chr10 110403480 110403880 -29912885 - LTR16B LTR ERVL -44 420 9 668 283 144 35 chr10 110403932 110404344 -29912421 - MLT1L LTR MaLR -8 580 151 345 235 137 78 chr10 110404363 110404453 -29912312 - MER5B DNA MER1_type -16 162 58 1789 167 7 10 chr10 110404453 110404759 -29912006 - AluJo SINE Alu -7 305 1 345 235 137 78 chr10 110404759 110404821 -29911944 - MER5B DNA MER1_type -120 58 1 422 264 24 16 chr10 110404871 110404996 -29911769 + MIR SINE MIR 69 194 -68 202 233 23 0 chr10 110405687 110405730 -29911035 + CT-rich Low_complexity Low_complexity 2 45 0 426 182 34 0 chr10 110406710 110406798 -29909967 - MIR3 SINE MIR -50 158 68 843 220 6 6 chr10 110408206 110408379 -29908386 - AluJo SINE Alu -17 295 123 246 288 71 47 chr10 110408478 110408648 -29908117 + MIR SINE MIR 22 195 -67 286 346 9 9 chr10 110408720 110408827 -29907938 + MIR SINE MIR 28 134 -128 248 209 45 15 chr10 110409076 110409143 -29907622 + MIR SINE MIR 23 91 -171 560 283 190 15 chr10 110409227 110409432 -29907333 - MIR SINE MIR -21 241 1 263 233 35 47 chr10 110410393 110410479 -29906286 + MIR SINE MIR 176 260 -2 2237 91 3 0 chr10 110410518 110410815 -29905950 - AluSq SINE Alu -15 298 1 187 366 109 0 chr10 110410964 110411065 -29905700 - MIR SINE MIR -57 205 94 294 281 31 10 chr10 110412047 110412143 -29904622 + MIR SINE MIR 48 145 -63 504 263 176 5 chr10 110412944 110413149 -29903616 + MIR SINE MIR 22 261 -1 2323 85 0 7 chr10 110413483 110413789 -29902976 - AluSx SINE Alu -8 304 1 564 316 131 36 chr10 110414328 110414935 -29901830 + L2 LINE L2 2612 3271 -1 526 284 47 0 chr10 110415340 110415488 -29901277 + MIR SINE MIR 108 262 0 360 345 0 0 chr10 110416142 110416255 -29900510 + MIR SINE MIR 51 163 -99 453 194 88 176 chr10 110416700 110416927 -29899838 + MIR SINE MIR 20 226 -36 334 306 48 16 chr10 110416963 110417087 -29899678 + L2 LINE L2 3142 3269 -3 214 255 35 35 chr10 110417278 110417419 -29899346 + (CGGG)n Simple_repeat Simple_repeat 4 144 0 310 306 56 50 chr10 110419173 110419328 -29897437 + MIR SINE MIR 22 180 -82 891 130 8 8 chr10 110419328 110419459 -29897306 + FLAM_C SINE Alu 1 131 -2 310 306 56 50 chr10 110419459 110419483 -29897282 + MIR SINE MIR 180 202 -60 2016 107 4 4 chr10 110420054 110420360 -29896405 - AluSg SINE Alu 0 306 1 405 0 0 0 chr10 110420686 110420731 -29896034 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 281 0 16 chr10 110420945 110421009 -29895756 + CT-rich Low_complexity Low_complexity 1 63 0 319 254 35 84 chr10 110421131 110421273 -29895492 - MIR3 SINE MIR -16 192 58 226 321 64 18 chr10 110421477 110421586 -29895179 + L2 LINE L2 3155 3268 -4 693 269 55 0 chr10 110421764 110421965 -29894800 + MIR SINE MIR 50 261 -1 669 211 0 20 chr10 110422016 110422269 -29894496 + (CA)n Simple_repeat Simple_repeat 1 247 0 595 171 19 0 chr10 110422955 110423060 -29893705 + MIR SINE MIR 48 154 -108 1312 207 120 89 chr10 110423061 110423444 -29893321 - MLT1F LTR MaLR 0 542 137 2214 107 0 7 chr10 110423444 110423744 -29893021 - AluSq SINE Alu -10 303 6 1312 207 120 89 chr10 110423744 110423877 -29892888 - MLT1F LTR MaLR -405 137 10 530 300 64 67 chr10 110424207 110424290 -29892475 - L2 LINE L2 -4 3268 3186 2222 108 0 0 chr10 110424290 110424596 -29892169 + AluSg SINE Alu 3 308 -2 530 300 64 67 chr10 110424596 110424658 -29892107 - L2 LINE L2 -86 3186 3125 794 254 57 0 chr10 110424658 110424851 -29891914 - MER105 DNA DNA 0 204 1 530 300 64 67 chr10 110424851 110425047 -29891718 - L2 LINE L2 -147 3125 2927 638 290 5 16 chr10 110425434 110425645 -29891120 - MIR SINE MIR -56 206 3 201 171 0 0 chr10 110425839 110425874 -29890891 + (TAA)n Simple_repeat Simple_repeat 2 36 0 472 230 182 18 chr10 110425885 110426050 -29890715 - MIR SINE MIR -54 208 17 461 281 14 36 chr10 110426748 110426887 -29889878 + MIR3 SINE MIR 11 146 -62 200 170 85 0 chr10 110427146 110427193 -29889572 - MER91C DNA MER1_type -63 77 27 1806 150 20 16 chr10 110427829 110428135 -29888630 - AluJb SINE Alu -5 307 1 488 193 17 17 chr10 110428144 110428263 -29888502 - L1ME1 LINE L1 -2 6164 6046 1291 153 4 31 chr10 110428263 110428492 -29888273 - AluJo SINE Alu -3 309 87 1937 215 48 11 chr10 110428492 110429012 -29887753 - L1ME1 LINE L1 -108 6058 5520 2259 112 0 3 chr10 110429155 110429468 -29887297 - AluSx SINE Alu 0 312 1 1740 140 10 49 chr10 110429576 110429883 -29886882 - AluJo SINE Alu -17 295 1 526 320 103 5 chr10 110429890 110430093 -29886672 + MIR SINE MIR 9 231 -31 623 209 16 0 chr10 110430716 110430845 -29885920 - L1MA10 LINE L1 -1 6333 6203 339 311 38 15 chr10 110430857 110430989 -29885776 - L1ME1 LINE L1 -92 6074 5940 2281 104 0 0 chr10 110430989 110431297 -29885468 - AluSx SINE Alu -2 310 3 415 264 14 27 chr10 110431416 110431564 -29885201 - L1MD2 LINE L1 -265 5901 5756 260 96 19 58 chr10 110432514 110432566 -29884199 - MIR SINE MIR -91 117 68 338 330 40 0 chr10 110432566 110432666 -29884099 + L2 LINE L2 3164 3267 -5 279 327 39 0 chr10 110434178 110434282 -29882483 - MER91A DNA MER1_type -85 111 4 300 308 242 19 chr10 110434319 110434530 -29882235 - MIR SINE MIR -1 261 4 414 243 10 63 chr10 110434760 110434888 -29881877 - MIR SINE MIR -83 125 3 235 282 229 29 chr10 110434922 110435092 -29881673 + MIR SINE MIR 41 244 -18 215 197 136 0 chr10 110435567 110435633 -29881132 + MIR SINE MIR 117 191 -71 334 301 116 23 chr10 110436519 110436692 -29880073 - MIR SINE MIR -66 196 8 309 313 10 0 chr10 110438707 110438803 -29877962 - MIR SINE MIR -68 140 44 586 271 77 0 chr10 110439537 110439718 -29877047 - MIR SINE MIR -29 233 39 778 214 77 20 chr10 110540915 110541037 -29775728 + MER3 DNA MER1_type 2 141 -68 2212 88 17 0 chr10 110541037 110541331 -29775434 - AluSp SINE Alu -14 299 1 778 214 77 20 chr10 110541331 110541404 -29775361 + MER3 DNA MER1_type 141 208 -1 1011 247 9 9 chr10 110542120 110542343 -29774422 + MIR SINE MIR 8 230 -32 2176 108 0 7 chr10 110542383 110542689 -29774076 + AluSx SINE Alu 1 304 -8 618 239 71 44 chr10 110543639 110543762 -29773003 + MIR SINE MIR 31 164 -98 1193 240 90 6 chr10 110543762 110544074 -29772691 + MER46C DNA MER2_type 1 338 0 618 239 71 44 chr10 110544074 110544176 -29772589 + MIR SINE MIR 164 262 0 386 247 44 16 chr10 110544706 110544835 -29771930 + MIR SINE MIR 38 168 -62 220 167 37 0 chr10 110545709 110545763 -29771002 + T-rich Low_complexity Low_complexity 5 60 0 201 39 0 0 chr10 110546285 110546311 -29770454 + (TAA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 110546315 110546338 -29770427 + AT_rich Low_complexity Low_complexity 1 23 0 264 250 44 0 chr10 110546858 110546926 -29769839 - L2 LINE L2 -2 3311 3241 1645 159 17 43 chr10 110547132 110547434 -29769331 + AluJb SINE Alu 9 302 -10 2303 88 3 0 chr10 110547836 110548132 -29768633 + AluSx SINE Alu 2 298 -14 1745 153 30 13 chr10 110548199 110548499 -29768266 + AluJb SINE Alu 2 306 -6 1305 133 56 93 chr10 110550321 110550422 -29766343 + AluJb SINE Alu 25 128 -184 2085 103 0 29 chr10 110550422 110550563 -29766202 + AluSx SINE Alu 1 145 -167 2035 117 3 3 chr10 110550563 110550854 -29765911 + AluSc SINE Alu 1 291 -18 2085 103 0 29 chr10 110550854 110551024 -29765741 + AluSx SINE Alu 145 303 -9 2171 90 3 17 chr10 110551024 110551348 -29765417 + AluY SINE Alu 1 311 0 1305 133 56 93 chr10 110551348 110551515 -29765250 + AluJb SINE Alu 126 284 -28 429 0 49 0 chr10 110551517 110551578 -29765187 + (TAAAA)n Simple_repeat Simple_repeat 3 66 0 2073 107 0 0 chr10 110551578 110551988 -29764777 + AluSx SINE Alu 2 411 0 2358 56 6 46 chr10 110552145 110552468 -29764297 - AluY SINE Alu -1 310 1 484 156 56 11 chr10 110552897 110552987 -29763778 - Alu SINE Alu -6 304 211 23 0 0 0 chr10 110553157 110553180 -29763585 + AT_rich Low_complexity Low_complexity 1 23 0 2182 108 0 3 chr10 110553255 110553551 -29763214 + AluSq SINE Alu 1 295 -18 2245 110 0 0 chr10 110553683 110553991 -29762774 + AluSq SINE Alu 1 308 -5 200 188 14 72 chr10 110554210 110554279 -29762486 + L2 LINE L2 2915 2979 -334 204 316 76 13 chr10 110554520 110554599 -29762166 + L2 LINE L2 3146 3229 -43 996 289 55 50 chr10 110554615 110554773 -29761992 - L2 LINE L2 0 3313 3157 2271 93 0 7 chr10 110554773 110555075 -29761690 + AluSx SINE Alu 1 300 -12 2274 84 3 7 chr10 110555085 110555381 -29761384 + AluSx SINE Alu 1 295 -17 2306 62 7 23 chr10 110555381 110555688 -29761077 + AluSq SINE Alu 1 302 -11 996 289 55 50 chr10 110555688 110556067 -29760698 - L2 LINE L2 -163 3150 2757 219 242 275 0 chr10 110557722 110557813 -29758952 + MER91A DNA MER1_type 8 123 -73 521 307 14 0 chr10 110558274 110558414 -29758351 + MIR SINE MIR 56 197 -65 477 302 78 24 chr10 110558692 110558897 -29757868 + MIR SINE MIR 9 224 -38 195 271 129 0 chr10 110559431 110559516 -29757249 - MIR SINE MIR -48 214 119 2240 120 0 0 chr10 110559516 110559825 -29756940 + AluSx SINE Alu 1 309 -3 244 175 0 0 chr10 110559932 110559972 -29756793 - Alu SINE Alu -268 40 1 873 166 16 52 chr10 110560030 110560223 -29756542 + MER53 DNA DNA 4 189 0 2332 49 10 33 chr10 110560284 110560590 -29756175 + AluY SINE Alu 1 299 -12 1029 174 0 0 chr10 110560590 110560751 -29756014 + AluJb SINE Alu 134 294 -18 2130 102 7 0 chr10 110561208 110561502 -29755263 - AluSq SINE Alu -4 309 14 252 253 111 39 chr10 110561555 110561725 -29755040 + MIR SINE MIR 44 262 0 203 244 0 0 chr10 110562265 110562306 -29754459 + GA-rich Low_complexity Low_complexity 1 41 0 183 80 0 0 chr10 110564656 110564681 -29752084 + (T)n Simple_repeat Simple_repeat 1 25 0 206 387 28 0 chr10 110567429 110567535 -29749230 + L2 LINE L2 3160 3268 -4 * 297 303 56 0 chr10 110567515 110567604 -29749161 - MIR SINE MIR -56 206 113 2304 74 28 3 chr10 110568090 110568373 -29748392 - AluY SINE Alu -21 290 1 2432 78 3 13 chr10 110569235 110569544 -29747221 + AluSq SINE Alu 1 306 -7 2407 91 0 3 chr10 110572271 110572578 -29744187 - AluY SINE Alu -5 306 1 2303 105 0 13 chr10 110572757 110573072 -29743693 - AluSx SINE Alu -1 311 1 2315 113 0 3 chr10 110573095 110573395 -29743370 + AluSq SINE Alu 1 299 -14 2382 104 0 0 chr10 110574197 110574495 -29742270 - AluSx SINE Alu -12 300 3 2287 119 3 3 chr10 110574576 110574888 -29741877 - AluSx SINE Alu 0 312 1 454 247 111 62 chr10 110574888 110574986 -29741779 - MER5A DNA MER1_type -3 186 75 2411 64 6 19 chr10 110574986 110575297 -29741468 - AluSg1 SINE Alu -1 308 2 454 247 111 62 chr10 110575297 110575360 -29741405 - MER5A DNA MER1_type -114 75 17 1607 164 7 61 chr10 110575360 110575541 -29741224 - AluJo SINE Alu -19 293 134 1943 134 50 0 chr10 110575541 110575818 -29740947 + AluSg SINE Alu 1 291 -19 1607 164 7 61 chr10 110575818 110575946 -29740819 - AluJo SINE Alu -178 134 1 243 88 0 0 chr10 110576043 110576077 -29740688 + (TG)n Simple_repeat Simple_repeat 1 34 0 1578 109 9 9 chr10 110576619 110576840 -29739925 - AluY SINE Alu -11 300 80 220 208 0 38 chr10 110676923 110676976 -29639789 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 359 287 11 0 chr10 110677494 110677588 -29639177 + L2 LINE L2 3219 3313 0 210 208 0 0 chr10 110677598 110677651 -29639114 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 1631 157 11 45 chr10 110678293 110678580 -29638185 + AluSx SINE Alu 18 294 -18 405 0 0 0 chr10 110679132 110679177 -29637588 + (A)n Simple_repeat Simple_repeat 1 45 0 517 262 98 31 chr10 110681237 110681462 -29635303 + MIR SINE MIR 20 259 -3 1772 152 3 36 chr10 110687791 110688094 -29628671 - AluJo SINE Alu -19 293 1 203 261 193 0 chr10 110689271 110689359 -29627406 - L2 LINE L2 -10 3303 3199 273 29 0 0 chr10 110691234 110691268 -29625497 + (CA)n Simple_repeat Simple_repeat 2 35 0 2246 104 7 0 chr10 110691512 110691800 -29624965 - AluSx SINE Alu -22 290 1 227 233 41 0 chr10 110693159 110693232 -29623533 + (TG)n Simple_repeat Simple_repeat 1 76 0 1577 106 5 9 chr10 110696661 110696879 -29619886 - AluSq SINE Alu -96 217 1 1350 160 114 10 chr10 110697166 110697473 -29619292 - MER44D DNA MER2_type 0 609 1 2295 128 0 0 chr10 110698257 110698563 -29618202 + AluSx SINE Alu 1 306 -6 205 250 0 0 chr10 110701456 110701500 -29615265 + L2 LINE L2 2884 2927 -345 244 291 135 64 chr10 110701857 110701975 -29614790 - L1MC/D LINE L1 -1922 5886 5778 1940 169 0 3 chr10 110701975 110702270 -29614495 + AluSx SINE Alu 1 294 -18 244 291 135 64 chr10 110702270 110702477 -29614288 - L1MC/D LINE L1 -2030 5778 5538 1079 157 44 142 chr10 110702524 110702721 -29614044 - AluJo SINE Alu -7 305 153 2474 73 0 13 chr10 110702721 110703023 -29613742 - AluSc SINE Alu -11 298 1 1079 157 44 142 chr10 110703023 110703163 -29613602 - AluJo SINE Alu -159 153 1 2354 106 3 0 chr10 110703169 110703480 -29613285 - AluSp SINE Alu -1 312 1 2488 87 0 3 chr10 110703488 110703800 -29612965 - AluY SINE Alu 0 311 1 2340 99 3 10 chr10 110704031 110704345 -29612420 + AluSx SINE Alu 1 312 0 2640 42 0 7 chr10 110704704 110705011 -29611754 + AluY SINE Alu 1 305 -6 2483 62 13 7 chr10 110705021 110705325 -29611440 + AluY SINE Alu 1 306 -5 984 196 70 82 chr10 110705379 110705491 -29611274 + MLT1F1 LTR MaLR 176 288 -279 2282 91 0 20 chr10 110705491 110705789 -29610976 + AluSc SINE Alu 1 292 -17 984 196 70 82 chr10 110705789 110705946 -29610819 + MLT1F1 LTR MaLR 288 442 -125 1237 194 0 9 chr10 110705946 110706163 -29610602 + AluJo SINE Alu 1 215 -97 383 79 16 48 chr10 110706165 110706228 -29610537 + AluSg/x SINE Alu 81 141 -159 1864 130 0 4 chr10 110706229 110706483 -29610282 + AluSc SINE Alu 1 253 -56 315 173 0 0 chr10 110706484 110706536 -29610229 + AluSc SINE Alu 230 281 -18 2267 119 3 0 chr10 110706540 110706843 -29609922 - AluSx SINE Alu -8 304 1 32 26 0 0 chr10 110706851 110706890 -29609875 + AT_rich Low_complexity Low_complexity 1 39 0 2332 117 0 0 chr10 110707143 110707443 -29609322 + AluSx SINE Alu 1 300 -12 735 250 6 0 chr10 110707547 110707707 -29609058 - FRAM SINE Alu -4 162 2 2486 77 7 3 chr10 110707742 110708052 -29608713 + AluSq SINE Alu 1 311 -2 1178 109 6 18 chr10 110708331 110708346 -29608419 + AluSc SINE Alu 119 133 -170 2333 97 3 7 chr10 110708346 110708646 -29608119 + AluSc SINE Alu 1 299 -10 1178 109 6 18 chr10 110708646 110708817 -29607948 + AluSc SINE Alu 133 303 0 632 165 50 0 chr10 110708832 110708953 -29607812 + FLAM_A SINE Alu 11 137 -5 1825 169 7 17 chr10 110708966 110709262 -29607503 + AluJo SINE Alu 9 301 -11 1973 101 90 0 chr10 110709263 110709541 -29607224 + AluSx SINE Alu 1 303 -9 2367 93 3 16 chr10 110709541 110709854 -29606911 + AluSg SINE Alu 1 309 -1 1370 98 0 0 chr10 110709896 110710070 -29606695 + AluSp SINE Alu 134 307 -6 2200 101 0 20 chr10 110710070 110710367 -29606398 + AluSx SINE Alu 1 291 -21 468 324 28 0 chr10 110710938 110711083 -29605682 + MIR SINE MIR 96 244 -18 180 0 0 0 chr10 110711423 110711443 -29605322 + (A)n Simple_repeat Simple_repeat 1 20 0 196 356 17 25 chr10 110711539 110711657 -29605108 - MIR SINE MIR -69 139 23 302 324 42 28 chr10 110812170 110812312 -29504453 - L2 LINE L2 -9 3304 3161 255 285 20 40 chr10 110813176 110813327 -29503438 + CT-rich Low_complexity Low_complexity 5 152 0 1928 282 47 63 chr10 110813561 110814540 -29502225 - L2 LINE L2 -1128 2186 1224 235 163 62 138 chr10 110814956 110815036 -29501729 - L1MA4A LINE L1 -42 6261 6188 4071 142 8 68 chr10 110815039 110815922 -29500843 - L1MA4A LINE L1 -181 6122 5293 825 229 26 16 chr10 110816240 110816432 -29500333 - L1ME3 LINE L1 -79 6083 5890 278 177 48 32 chr10 110816446 110816508 -29500257 + MER112 DNA MER1_type 197 259 -1 278 224 47 59 chr10 110816516 110816601 -29500164 - MER5A DNA MER1_type -20 169 86 507 321 183 18 chr10 110817502 110817901 -29498864 - L2 LINE L2 -1 3312 2848 391 322 26 33 chr10 110818261 110818413 -29498352 - MIR3 SINE MIR -14 194 44 217 189 0 0 chr10 110819316 110819353 -29497412 + MIR SINE MIR 217 253 -9 220 234 16 78 chr10 110820731 110820795 -29495970 - MIR3 SINE MIR -11 197 138 511 298 102 34 chr10 110821165 110821370 -29495395 - MIR SINE MIR -25 237 19 722 83 0 68 chr10 110822562 110822695 -29494070 - AluY SINE Alu -185 126 3 202 320 122 71 chr10 110822741 110823035 -29493730 + L2 LINE L2 2804 3112 -160 188 378 0 11 chr10 110823083 110823173 -29493592 + L2 LINE L2 3225 3313 0 434 295 76 38 chr10 110823790 110824078 -29492687 + MER102b DNA MER1_type 34 332 -9 385 370 45 5 chr10 110824804 110825004 -29491761 + L3 LINE CR1 1263 1470 -107 2264 98 0 0 chr10 110825042 110825328 -29491437 - AluSx SINE Alu -16 296 11 581 193 7 15 chr10 110825338 110825473 -29491292 + L1PB4 LINE L1 6020 6153 -3 23 0 0 0 chr10 110825642 110825665 -29491100 + AT_rich Low_complexity Low_complexity 1 23 0 246 248 35 0 chr10 110826013 110826126 -29490639 + GA-rich Low_complexity Low_complexity 3 119 0 269 331 70 14 chr10 110826340 110826482 -29490283 + MIR SINE MIR 5 154 -108 790 266 139 40 chr10 110826483 110826726 -29490039 + MLT1I LTR MaLR 1 285 -124 2471 102 10 31 chr10 110826726 110827109 -29489656 + THE1C LTR MaLR 1 375 0 790 266 139 40 chr10 110827109 110827188 -29489577 + MLT1I LTR MaLR 285 355 -54 1893 160 13 49 chr10 110827276 110827664 -29489101 + MLT1B LTR MaLR 1 374 -16 2292 177 21 16 chr10 110827664 110828003 -29488762 + MSTB LTR MaLR 1 344 -82 1694 164 29 52 chr10 110828003 110828387 -29488378 - THE1C LTR MaLR 0 375 1 2292 177 21 16 chr10 110828387 110828471 -29488294 + MSTB LTR MaLR 344 426 0 474 278 90 8 chr10 110828491 110828624 -29488141 - MIR SINE MIR -98 164 21 479 315 97 33 chr10 110828842 110829264 -29487501 - LTR33 LTR ERVL -52 469 21 634 264 25 87 chr10 110830333 110830523 -29486242 - MARNA DNA Mariner -46 540 381 1015 181 17 73 chr10 110830523 110830755 -29486010 + MER20 DNA MER1_type 1 219 0 634 264 25 87 chr10 110830755 110830920 -29485845 - MARNA DNA Mariner -205 381 207 199 274 0 0 chr10 110830985 110831036 -29485729 - L2 LINE L2 0 3313 3263 548 81 0 17 chr10 110831036 110831273 -29485492 + AluY SINE Alu 1 309 0 337 143 82 112 chr10 110831378 110831476 -29485289 + MIR SINE MIR 168 262 0 40937 32 21 1 chr10 110832455 110838486 -29478279 + L1HS LINE L1 1 6155 0 249 330 30 48 chr10 110838520 110838708 -29478057 + MIR SINE MIR 37 221 -41 236 333 56 32 chr10 110840158 110840284 -29476481 - L2 LINE L2 -1 3312 3184 333 309 137 14 chr10 110840622 110840761 -29476004 + MIR SINE MIR 22 177 -85 244 239 76 43 chr10 110841569 110841661 -29475104 + MIR SINE MIR 168 262 0 1828 174 90 12 chr10 110844638 110845051 -29471714 + L1MB7 LINE L1 5652 6096 -88 1324 178 35 0 chr10 110845053 110845311 -29471454 + L1MD1 LINE L1 5976 6242 0 28 0 0 0 chr10 110845367 110845395 -29471370 + AT_rich Low_complexity Low_complexity 1 28 0 391 257 71 14 chr10 110845919 110846059 -29470706 + LTR16C LTR ERVL 335 482 -9 310 246 20 84 chr10 110846360 110846563 -29470202 + L1ME LINE L1 5563 5752 -369 23 0 0 0 chr10 110846684 110846707 -29470058 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 110847004 110847025 -29469740 + AT_rich Low_complexity Low_complexity 1 21 0 824 259 132 8 chr10 110847398 110847649 -29469116 - AluSx SINE Alu -30 282 1 847 129 7 0 chr10 110847674 110847813 -29468952 + L1MA3 LINE L1 6166 6305 0 481 303 117 0 chr10 110848509 110848671 -29468094 + MIR3 SINE MIR 15 195 -13 219 69 0 0 chr10 110848729 110848758 -29468007 + (CA)n Simple_repeat Simple_repeat 2 30 0 457 282 117 0 chr10 110849018 110849181 -29467584 + MIR SINE MIR 37 218 -44 328 301 100 38 chr10 110849257 110849496 -29467269 - L2 LINE L2 -922 2392 2139 1598 194 39 19 chr10 110849528 110849673 -29467092 - L1MA9 LINE L1 0 6312 6171 402 21 0 0 chr10 110849673 110849720 -29467045 + (TG)n Simple_repeat Simple_repeat 2 48 0 2127 163 48 17 chr10 110849720 110850132 -29466633 - MSTA LTR MaLR -3 425 1 222 118 0 0 chr10 110850141 110850175 -29466590 + (TATG)n Simple_repeat Simple_repeat 1 34 0 1598 194 39 19 chr10 110850175 110850431 -29466334 - L1MA9 LINE L1 -148 6164 5892 484 322 99 22 chr10 110850464 110850778 -29465987 - L2 LINE L2 -1220 2094 1757 180 111 0 0 chr10 110851273 110851300 -29465465 + (TG)n Simple_repeat Simple_repeat 1 27 0 264 30 0 0 chr10 110852380 110852413 -29464352 + (A)n Simple_repeat Simple_repeat 1 33 0 2114 95 7 24 chr10 110852583 110852878 -29463887 + AluSc SINE Alu 1 290 -19 744 274 55 5 chr10 110853132 110853351 -29463414 + MIR SINE MIR 5 234 -28 806 305 119 25 chr10 110853587 110854247 -29462518 - L2 LINE L2 -88 3225 2500 180 222 63 48 chr10 110855471 110855534 -29461231 + L3 LINE CR1 1262 1325 -252 254 229 71 0 chr10 110855549 110855619 -29461146 - MLT1K LTR MaLR -358 230 156 2070 44 0 0 chr10 110856047 110856296 -29460469 + L1PA6 LINE L1 5904 6152 -2 323 303 121 35 chr10 110856512 110856710 -29460055 - MIR SINE MIR 0 262 48 230 207 0 35 chr10 110856852 110856974 -29459791 + CT-rich Low_complexity Low_complexity 1 117 0 463 260 71 59 chr10 110857022 110857276 -29459489 + MIR SINE MIR 6 262 0 545 328 39 27 chr10 110858749 110859008 -29457757 + MIR SINE MIR 1 262 0 21 36 0 0 chr10 110859197 110859225 -29457540 + AT_rich Low_complexity Low_complexity 1 28 0 507 216 0 0 chr10 110861667 110861783 -29454982 + (TA)n Simple_repeat Simple_repeat 2 117 0 396 40 0 0 chr10 110862391 110862441 -29454324 + (TG)n Simple_repeat Simple_repeat 1 50 0 233 139 0 0 chr10 110864081 110864117 -29452648 + L3 LINE CR1 1538 1573 -4 597 271 5 53 chr10 110865142 110865330 -29451435 - MER5A DNA MER1_type 0 189 11 1814 149 0 0 chr10 110865393 110865662 -29451103 + AluJb SINE Alu 35 303 -9 6039 84 12 28 chr10 110865749 110866523 -29450242 - L1PA13 LINE L1 0 6163 5417 2364 90 3 13 chr10 110866523 110866835 -29449930 - AluSx SINE Alu -3 309 1 6039 84 12 28 chr10 110866835 110867493 -29449272 - L1PA13 LINE L1 -746 5417 4750 318 295 58 89 chr10 110868086 110868276 -29448489 + MIR3 SINE MIR 18 201 -7 347 241 9 45 chr10 110868525 110868637 -29448128 - MER103 DNA DNA -24 142 35 7220 165 28 25 chr10 110869275 110870701 -29446064 + L1P LINE L1 11 1441 -4705 8275 60 1 6 chr10 110870707 110872563 -29444202 + L1PA6 LINE L1 4295 6151 -3 731 291 75 48 chr10 110874268 110874798 -29441967 + L2 LINE L2 2561 3107 -206 584 154 0 8 chr10 110874950 110875067 -29441698 + L1MB7 LINE L1 6062 6177 -7 26 50 0 0 chr10 110875103 110875143 -29441622 + AT_rich Low_complexity Low_complexity 1 40 0 2770 9 0 13 chr10 110875932 110876247 -29440518 - AluYa5 SINE Alu 0 311 1 325 377 69 17 chr10 110879027 110879316 -29437449 + L2 LINE L2 2587 2890 -424 325 348 52 83 chr10 110879359 110879684 -29437081 + L2 LINE L2 2958 3272 0 291 306 41 25 chr10 110880346 110880467 -29436298 - L2 LINE L2 -4 3309 3187 461 263 144 34 chr10 110880608 110880844 -29435921 + MIR SINE MIR 1 262 0 264 267 30 0 chr10 110881350 110881451 -29435314 + (TA)n Simple_repeat Simple_repeat 2 105 0 2174 112 7 0 chr10 110882393 110882687 -29434078 - AluSq SINE Alu -9 304 9 3562 155 79 15 chr10 110882977 110883698 -29433067 + L1PBa LINE L1 221 987 -5876 8378 211 30 12 chr10 110883703 110884560 -29432205 + L1PBa LINE L1 1092 1932 -4930 2152 119 0 19 chr10 110884560 110884871 -29431894 + AluSc SINE Alu 1 305 -4 8378 211 30 12 chr10 110884871 110886347 -29430418 + L1PBa LINE L1 1932 3380 -3482 2315 86 3 3 chr10 110886347 110886638 -29430127 + AluSp SINE Alu 1 291 -22 8378 211 30 12 chr10 110886638 110888022 -29428743 + L1PBa LINE L1 3380 5073 -1789 201 289 24 42 chr10 110888153 110888319 -29428446 + A-rich Low_complexity Low_complexity 3 165 0 1343 93 0 28 chr10 110888386 110888600 -29428165 + AluY SINE Alu 104 311 0 21 36 0 0 chr10 110888634 110888662 -29428103 + AT_rich Low_complexity Low_complexity 1 28 0 5440 162 46 28 chr10 110889074 110890249 -29426516 - L1MA9 LINE L1 -1 6311 5072 1994 145 3 13 chr10 110890249 110890559 -29426206 - AluSx SINE Alu -5 307 1 5440 162 46 28 chr10 110890559 110891623 -29425142 - L1MA9 LINE L1 -1240 5072 4029 198 288 0 15 chr10 110891653 110891719 -29425046 - L2 LINE L2 -73 3240 3176 400 290 23 8 chr10 110891748 110891879 -29424886 - MIR SINE MIR -1 261 129 2209 125 13 0 chr10 110892021 110892326 -29424439 + AluSq SINE Alu 1 309 -4 297 350 0 42 chr10 110892699 110892842 -29423923 - MIR3 SINE MIR -65 143 7 1011 318 72 29 chr10 110892882 110893431 -29423334 - L2 LINE L2 -4 3309 2739 216 0 0 0 chr10 110894798 110894822 -29421943 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 218 374 8 61 chr10 110895840 110896086 -29420679 - L2 LINE L2 -527 2787 2555 2185 110 3 0 chr10 110896521 110896811 -29419954 - AluSg SINE Alu -19 291 1 843 314 57 18 chr10 110896948 110897337 -29419428 - LTR16A LTR ERVL -12 438 35 408 291 75 8 chr10 110897371 110897505 -29419260 + MIR SINE MIR 110 252 -10 923 174 164 0 chr10 110897764 110897965 -29418800 + Tigger7 DNA MER2_type 1 234 -2253 456 151 0 0 chr10 110897966 110898039 -29418726 + Tigger7 DNA MER2_type 2482 2554 -33 319 325 16 0 chr10 110898408 110898531 -29418234 + MIR SINE MIR 136 260 -2 261 256 100 22 chr10 110899844 110899934 -29416831 - MER97a DNA MER1_type? -1 893 797 293 148 33 0 chr10 110900010 110900071 -29416694 + (CATA)n Simple_repeat Simple_repeat 2 64 0 336 217 104 9 chr10 110900581 110900687 -29416078 - MER97a DNA MER1_type? -293 601 486 2399 123 0 62 chr10 110900903 110901326 -29415439 - MER1A DNA MER1_type -98 431 35 198 0 0 0 chr10 110902770 110902792 -29413973 + (TA)n Simple_repeat Simple_repeat 2 23 0 764 259 47 99 chr10 110902844 110903269 -29413496 + MLT1I LTR MaLR 7 409 0 323 260 151 72 chr10 110903648 110903913 -29412852 - MLT1J LTR MaLR -2 509 224 195 348 8 42 chr10 110904453 110904571 -29412194 + MIR SINE MIR 13 126 -136 208 81 54 0 chr10 110905354 110905391 -29411374 + (CA)n Simple_repeat Simple_repeat 2 40 0 445 246 138 7 chr10 110906059 110906197 -29410568 - L2 LINE L2 -706 2608 2453 29 47 0 0 chr10 110906348 110906391 -29410374 + AT_rich Low_complexity Low_complexity 1 43 0 410 321 36 0 chr10 110907348 110907460 -29409305 + MIR SINE MIR 31 146 -116 1703 215 25 61 chr10 110908243 110908764 -29408001 - MLT1D LTR MaLR -3 502 1 186 212 0 76 chr10 110908789 110908855 -29407910 - L2 LINE L2 -1621 1693 1633 335 371 91 33 chr10 110909091 110909366 -29407399 + HAL1 LINE L1 327 617 -1890 248 234 129 24 chr10 110909511 110909635 -29407130 + HAL1 LINE L1 792 928 -1579 590 192 26 166 chr10 110909681 110909910 -29406855 + L1MA6 LINE L1 6095 6300 0 23290 116 13 20 chr10 110909910 110914377 -29402388 - L1P3 LINE L1 -1561 4900 433 4845 94 28 1 chr10 110914381 110915244 -29401521 + L1P3 LINE L1 4910 5793 -676 1882 158 0 14 chr10 110915255 110915552 -29401213 + AluSc SINE Alu 1 293 -16 26 0 0 0 chr10 110915761 110915787 -29400978 + AT_rich Low_complexity Low_complexity 1 26 0 7438 38 0 1 chr10 110915787 110917189 -29399576 - L1PA5 LINE L1 -11 6143 4743 5586 45 10 0 chr10 110917531 110918219 -29398546 + L1PA8 LINE L1 5476 6170 -2 2323 82 0 10 chr10 110918219 110918525 -29398240 + AluY SINE Alu 1 303 -8 436 281 55 28 chr10 110918640 110918721 -29398044 + HAL1 LINE L1 1082 1159 -1348 737 257 112 53 chr10 110918721 110919003 -29397762 - MLT1D LTR MaLR -2 503 180 1986 152 7 7 chr10 110919003 110919305 -29397460 - AluSx SINE Alu -10 302 1 737 257 112 53 chr10 110919305 110919497 -29397268 - MLT1D LTR MaLR -325 180 1 436 281 55 28 chr10 110919497 110919668 -29397097 + HAL1 LINE L1 1159 1341 -1166 512 286 25 66 chr10 110919673 110920112 -29396653 + L1MC3 LINE L1 3 365 -5680 9180 224 73 24 chr10 110920133 110922505 -29394260 + L1MC3 LINE L1 4194 6832 -1371 2071 120 0 13 chr10 110922505 110922805 -29393960 + AluSc SINE Alu 6 301 -8 9180 224 73 24 chr10 110922805 110924241 -29392524 + L1MC3 LINE L1 6832 8195 -8 236 188 62 0 chr10 110924660 110924724 -29392041 + MER103 DNA DNA 98 165 -1 216 211 0 0 chr10 110924947 110924985 -29391780 + polypurine Low_complexity Low_complexity 1 38 0 476 72 14 0 chr10 110925093 110925162 -29391603 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1012 181 32 44 chr10 110925170 110925418 -29391347 - AluJo SINE Alu -4 308 64 190 316 21 21 chr10 110925814 110925909 -29390856 - MIR SINE MIR -6 256 162 196 348 142 13 chr10 110926081 110926234 -29390531 - L3b LINE CR1 -51 1532 1360 234 338 137 14 chr10 110926234 110926373 -29390392 - MER5A DNA MER1_type 0 189 34 359 343 10 0 chr10 110927236 110927338 -29389427 + MER5A DNA MER1_type 4 106 -83 251 234 117 32 chr10 110928311 110928405 -29388360 + MER5B DNA MER1_type 57 158 -20 410 305 106 0 chr10 110928517 110928668 -29388097 + L3 LINE CR1 1203 1369 -208 239 359 82 24 chr10 110929436 110929595 -29387170 + L3 LINE CR1 1370 1538 -39 231 354 61 0 chr10 110929595 110929694 -29387071 - MER5A DNA MER1_type 0 189 85 2193 89 0 7 chr10 110930758 110931049 -29385716 - AluY SINE Alu -22 289 1 2145 137 0 6 chr10 110931397 110931711 -29385054 + AluSx SINE Alu 1 312 0 198 280 107 40 chr10 110932089 110932164 -29384601 - MIR SINE MIR -155 107 28 * 278 336 47 20 chr10 110932126 110932275 -29384490 + MIR SINE MIR 92 244 -18 757 277 102 25 chr10 110932416 110932701 -29384064 - MLT1I LTR MaLR -2 407 101 421 325 61 12 chr10 110932820 110932983 -29383782 - MIR SINE MIR -52 210 40 417 289 103 20 chr10 110933306 110933510 -29383255 - MIR SINE MIR -32 230 10 3238 186 9 13 chr10 110933719 110934509 -29382256 + L1MA9 LINE L1 5126 5914 -398 13968 138 14 56 chr10 110934534 110935323 -29381442 + Tigger1 DNA MER2_type 26 847 -1571 1013 111 47 23 chr10 110935323 110935495 -29381270 - L1PA13 LINE L1 -4 6159 5984 13968 138 14 56 chr10 110935495 110937204 -29379561 + Tigger1 DNA MER2_type 847 2418 0 333 193 0 118 chr10 110937278 110937397 -29379368 + L1MA9 LINE L1 6167 6271 -41 1845 143 14 3 chr10 110937641 110937928 -29378837 + AluJb SINE Alu 4 293 -19 355 282 133 21 chr10 110938795 110939029 -29377736 + MIR SINE MIR 3 262 0 413 319 48 52 chr10 110939877 110940128 -29376637 + MIR SINE MIR 11 260 -2 1200 173 8 0 chr10 110940367 110940610 -29376155 - L1MA4 LINE L1 0 6300 6056 1257 223 58 45 chr10 110941231 110941613 -29375152 + MLT1B LTR MaLR 4 390 0 289 229 125 68 chr10 110942793 110942985 -29373780 - L1ME3 LINE L1 -2 6229 6027 372 94 0 0 chr10 110942995 110943048 -29373717 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 2031 118 4 0 chr10 110943048 110943320 -29373445 - AluSc SINE Alu -36 273 1 1757 266 65 12 chr10 110943323 110944081 -29372684 - L1ME3 LINE L1 -207 6024 5231 529 274 135 47 chr10 110944120 110944565 -29372200 - L1ME3 LINE L1 -3652 2563 2159 2292 86 7 0 chr10 110944565 110944856 -29371909 + AluSg SINE Alu 1 293 -17 529 274 135 47 chr10 110944856 110945346 -29371419 - L1ME3 LINE L1 -4056 2159 1594 783 290 44 8 chr10 110945888 110946136 -29370629 + LTR16A1 LTR ERVL 201 457 0 2191 149 80 20 chr10 110946218 110946620 -29370145 + MSTB LTR MaLR 1 426 0 1012 197 9 27 chr10 110946676 110946899 -29369866 + MER20 DNA MER1_type 1 219 0 2450 62 3 0 chr10 110947075 110947364 -29369401 + AluSp SINE Alu 1 290 -23 232 276 19 9 chr10 110947680 110947785 -29368980 + (TA)n Simple_repeat Simple_repeat 2 107 0 416 292 43 56 chr10 110949479 110949498 -29367267 + MIR SINE MIR 13 31 -231 7385 39 5 3 chr10 110949498 110950554 -29366211 + L1PA5 LINE L1 5095 6152 -2 416 292 43 56 chr10 110950554 110950695 -29366070 + MIR SINE MIR 31 171 -91 473 218 26 1 chr10 110950696 110950808 -29365957 + MLT1H1 LTR MaLR 1 89 -441 1237 191 95 0 chr10 110950995 110951247 -29365518 + MSTA LTR MaLR 1 276 -152 2148 106 0 0 chr10 110951366 110951673 -29365092 - AluSx SINE Alu 0 308 2 2145 110 0 0 chr10 110953255 110953566 -29363199 - AluSg SINE Alu 0 311 1 269 25 75 0 chr10 110953667 110953707 -29363058 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 308 293 136 14 chr10 110953855 110954002 -29362763 - MIR SINE MIR -62 200 36 225 0 0 0 chr10 110954495 110954520 -29362245 + (A)n Simple_repeat Simple_repeat 1 25 0 4096 289 79 47 chr10 110955335 110957652 -29359113 + HAL1 LINE L1 52 2448 -59 694 266 110 46 chr10 110957652 110958069 -29358696 - MLT1J1 LTR MaLR 0 446 3 4096 289 79 47 chr10 110958069 110958108 -29358657 + HAL1 LINE L1 2448 2484 -23 264 170 57 7 chr10 110958456 110958597 -29358168 + (TA)n Simple_repeat Simple_repeat 1 148 0 211 185 43 22 chr10 110958598 110958690 -29358075 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 401 238 48 0 chr10 110959725 110959830 -29356935 + MER94 DNA DNA 10 119 -15 227 274 0 42 chr10 110959912 110960007 -29356758 + L1MC4 LINE L1 6614 6704 -1338 2016 155 36 18 chr10 110960043 110960436 -29356329 + L1MB3 LINE L1 5781 6180 -3 26 0 0 0 chr10 110961081 110961107 -29355658 + AT_rich Low_complexity Low_complexity 1 26 0 3176 24 5 0 chr10 110961115 110961489 -29355276 - L1PA5 LINE L1 -2 6152 5777 2207 125 0 0 chr10 110961816 110962121 -29354644 - AluSx SINE Alu -7 305 1 248 211 19 0 chr10 110964767 110964819 -29351946 + LTR67 LTR ERVL 494 546 -11 781 254 57 4 chr10 110966375 110966623 -29350142 + L1MA9 LINE L1 6012 6272 -40 526 299 129 61 chr10 110967060 110967378 -29349387 - L1MEd LINE L1 -4934 1438 1143 2134 125 0 3 chr10 110967378 110967681 -29349084 - AluSx SINE Alu -8 304 3 526 299 129 61 chr10 110967681 110967887 -29348878 - L1MEd LINE L1 -5229 1143 807 232 309 55 0 chr10 110968580 110968690 -29348075 - L1MEd LINE L1 -5943 429 314 861 256 96 22 chr10 110968757 110969112 -29347653 - MER76 LTR ERV -66 622 242 338 100 0 67 chr10 110969112 110969186 -29347579 - MLT2A1 LTR ERVL 0 444 390 408 106 35 49 chr10 110969188 110969330 -29347435 + (TA)n Simple_repeat Simple_repeat 2 141 0 3318 59 0 0 chr10 110969330 110969734 -29347031 - MLT2A1 LTR ERVL -40 404 1 624 186 70 39 chr10 110969751 110969907 -29346858 - MER76 LTR ERV -510 178 18 226 204 48 0 chr10 110970204 110970307 -29346458 + (TA)n Simple_repeat Simple_repeat 2 109 0 269 212 23 45 chr10 110972180 110972312 -29344453 - L1ME3A LINE L1 -14 6156 6028 809 253 80 33 chr10 110972325 110972688 -29344077 - L1ME3A LINE L1 -232 5938 5559 189 107 0 0 chr10 110972792 110972820 -29343945 + (TA)n Simple_repeat Simple_repeat 1 28 0 603 51 100 0 chr10 110972909 110973190 -29343575 + (TA)n Simple_repeat Simple_repeat 1 308 0 232 178 0 0 chr10 110973251 110973296 -29343469 + (TA)n Simple_repeat Simple_repeat 2 46 0 1046 304 95 17 chr10 110973320 110974162 -29342603 - L1ME3A LINE L1 -586 5576 4665 529 116 63 24 chr10 110974332 110974627 -29342138 + (TA)n Simple_repeat Simple_repeat 1 306 0 1866 277 74 34 chr10 110974651 110975789 -29340976 - L1ME LINE L1 -586 5576 4390 606 318 43 13 chr10 110975942 110976175 -29340590 + MIR SINE MIR 23 262 0 251 258 0 0 chr10 110976177 110976239 -29340526 + (ATG)n Simple_repeat Simple_repeat 2 63 0 208 227 57 11 chr10 110976821 110976909 -29339856 + (CCGGG)n Simple_repeat Simple_repeat 2 93 0 * 259 253 36 30 chr10 110976846 110977012 -29339753 + C-rich Low_complexity Low_complexity 5 171 0 70 73 0 0 chr10 110977016 110977098 -29339667 + GC_rich Low_complexity Low_complexity 1 82 0 5840 172 17 4 chr10 110977359 110979054 -29337711 + L1PB1 LINE L1 4070 5800 -351 198 0 0 0 chr10 110979054 110979076 -29337689 + (TA)n Simple_repeat Simple_repeat 2 23 0 5840 172 17 4 chr10 110979076 110979429 -29337336 + L1PB1 LINE L1 5800 6147 -4 697 207 0 38 chr10 110979439 110979652 -29337113 + LTR23-int LTR ERV1 1785 1989 -3134 2428 244 50 45 chr10 110979652 110980244 -29336521 + L1MA8 LINE L1 2458 3045 -4520 1667 169 4 18 chr10 110980244 110980366 -29336399 + AluSx SINE Alu 6 128 -184 189 0 0 0 chr10 110980366 110980387 -29336378 + (CA)n Simple_repeat Simple_repeat 2 22 0 1667 169 4 18 chr10 110980387 110980543 -29336222 + AluSx SINE Alu 128 280 -32 182 37 37 0 chr10 110980547 110980574 -29336191 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2428 244 50 45 chr10 110980574 110981534 -29335231 + L1MA8 LINE L1 3047 4000 -3565 2166 141 62 41 chr10 110981534 110981953 -29334812 + MSTA LTR MaLR 1 428 0 8845 173 30 8 chr10 110981953 110983305 -29333460 + MSTA-int LTR MaLR 1 1396 -255 2185 131 0 0 chr10 110983305 110983611 -29333154 - AluSq SINE Alu -7 306 1 8845 173 30 8 chr10 110983611 110983873 -29332892 + MSTA-int LTR MaLR 1396 1651 0 2485 133 36 5 chr10 110983873 110984288 -29332477 + MSTA LTR MaLR 1 428 0 2428 244 50 45 chr10 110984288 110984371 -29332394 + L1MA8 LINE L1 3999 4106 -3459 330 130 0 0 chr10 110984371 110984417 -29332348 - Alu SINE Alu -253 46 1 1272 134 15 0 chr10 110984417 110984619 -29332146 + THE1-int LTR MaLR 1311 1515 -65 954 217 5 0 chr10 110984634 110984832 -29331933 + L1MA8 LINE L1 4117 4315 -3250 * 5804 165 61 19 chr10 110984830 110987008 -29329757 + L1MA8 LINE L1 5448 7705 -5 307 253 33 37 chr10 110987317 110987477 -29329288 + L1ME4a LINE L1 5691 5851 -270 236 196 0 0 chr10 110987557 110987603 -29329162 + L1ME4a LINE L1 5979 6024 -97 768 281 51 29 chr10 110987738 110988051 -29328714 + LTR16C LTR ERVL 158 477 -14 235 212 230 9 chr10 110988590 110988703 -29328062 + MIR SINE MIR 84 221 -41 203 254 16 16 chr10 110989413 110989476 -29327289 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 2841 111 40 20 chr10 110991314 110991764 -29325001 - L1PA11 LINE L1 -4 6170 5712 222 203 27 14 chr10 110992147 110992221 -29324544 + (TTATA)n Simple_repeat Simple_repeat 2 76 0 1102 112 108 0 chr10 110992599 110992813 -29323952 - L1MA5A LINE L1 0 6297 6061 307 318 56 8 chr10 110994050 110994176 -29322589 - MLT1K LTR MaLR -87 501 370 226 357 12 12 chr10 110994307 110994391 -29322374 - MLT1K LTR MaLR -382 206 123 506 271 86 14 chr10 110996253 110996393 -29320372 + L2 LINE L2 3160 3309 -4 2040 237 109 27 chr10 110996673 110997231 -29319534 + MLT2F LTR ERVL 2 605 -58 356 114 23 34 chr10 110997235 110997323 -29319442 + (TCTA)n Simple_repeat Simple_repeat 2 88 0 203 328 15 0 chr10 110998044 110998111 -29318654 + MIR SINE MIR 195 262 0 2068 88 3 14 chr10 110999289 110999612 -29317153 + AluY SINE Alu 1 320 0 605 143 50 36 chr10 110999617 110999757 -29317008 + L1MB4 LINE L1 6039 6180 0 978 236 98 6 chr10 110999941 111000279 -29316486 + MER57A LTR ERV1 71 403 0 253 345 0 27 chr10 111001389 111001499 -29315266 - L2 LINE L2 -18 3295 3189 23 0 0 0 chr10 111002358 111002381 -29314384 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 111002713 111002739 -29314026 + AT_rich Low_complexity Low_complexity 1 26 0 324 0 0 0 chr10 111002812 111002848 -29313917 + (CA)n Simple_repeat Simple_repeat 2 37 0 209 345 134 8 chr10 111003188 111003307 -29313458 - MIR3 SINE MIR -73 135 2 578 310 101 24 chr10 111003895 111004192 -29312573 - LTR16A LTR ERVL -10 440 121 298 92 123 15 chr10 111004618 111004683 -29312082 + L1PA13 LINE L1 6078 6149 -14 2477 334 86 38 chr10 111004691 111006530 -29310235 - HERV16 LTR ERVL -550 5104 3156 1724 194 39 14 chr10 111006530 111006886 -29309879 + MLT1A1 LTR MaLR 1 365 0 2477 334 86 38 chr10 111006886 111007087 -29309678 - HERV16 LTR ERVL -2498 3156 2966 1775 312 82 38 chr10 111007085 111007162 -29309603 - HERV16 LTR ERVL -3451 1545 1473 * 1234 188 43 121 chr10 111007162 111007582 -29309183 + MLT1B LTR MaLR 4 390 0 1775 312 82 38 chr10 111007582 111008836 -29307929 - HERV16 LTR ERVL -3523 1473 276 195 42 0 0 chr10 111008836 111008860 -29307905 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2159 125 0 0 chr10 111008863 111009151 -29307614 - AluSx SINE Alu -24 288 1 1775 312 82 38 chr10 111009151 111009277 -29307488 - HERV16 LTR ERVL -4721 275 1 963 309 61 19 chr10 111009277 111009656 -29307109 - LTR16A LTR ERVL 0 450 56 403 299 75 8 chr10 111009711 111009845 -29306920 + MIR SINE MIR 110 252 -10 975 179 164 0 chr10 111010104 111010305 -29306460 + Tigger7 DNA MER2_type 1 234 -2253 483 151 0 0 chr10 111010306 111010379 -29306386 + Tigger7 DNA MER2_type 2386 2458 -33 327 325 16 0 chr10 111010748 111010871 -29305894 + MIR SINE MIR 136 260 -2 556 233 91 6 chr10 111011652 111011828 -29304937 - MER97b DNA MER1_type? -452 601 411 1265 201 15 43 chr10 111011877 111012201 -29304564 - MER97b DNA MER1_type? -738 315 1 728 215 41 36 chr10 111013280 111013475 -29303290 + MLT1D LTR MaLR 1 196 -309 1177 156 121 0 chr10 111013475 111013591 -29303174 + L1MA9 LINE L1 6025 6126 -186 531 101 0 0 chr10 111013591 111013670 -29303095 + (CA)n Simple_repeat Simple_repeat 1 79 0 1177 156 121 0 chr10 111013670 111013810 -29302955 + L1MA9 LINE L1 6126 6312 0 618 237 119 20 chr10 111013823 111014076 -29302689 + MLT1D LTR MaLR 190 467 0 409 344 40 0 chr10 111014354 111014479 -29302286 - L2 LINE L2 -2 3311 3182 383 227 253 0 chr10 111014453 111014607 -29302158 - L2 LINE L2 -536 2778 2586 * 356 326 28 21 chr10 111014610 111014751 -29302014 - L2 LINE L2 -3140 174 33 1853 144 79 17 chr10 111016456 111016809 -29299956 - THE1C LTR MaLR 0 375 1 927 183 10 56 chr10 111017746 111017943 -29298822 + MER5A DNA MER1_type 1 188 -1 43 20 0 0 chr10 111018998 111019048 -29297717 + AT_rich Low_complexity Low_complexity 1 50 0 383 252 58 22 chr10 111020867 111021006 -29295759 + MIR SINE MIR 114 257 -5 381 287 8 49 chr10 111023102 111023224 -29293541 - MER5A DNA MER1_type -4 185 69 3559 194 4 7 chr10 111023284 111024025 -29292740 - L1 LINE L1 -2036 4110 3372 765 173 6 26 chr10 111024025 111024179 -29292586 + L1PB4 LINE L1 6004 6156 0 22 35 0 0 chr10 111024756 111024785 -29291980 + AT_rich Low_complexity Low_complexity 1 29 0 356 268 176 14 chr10 111025368 111025510 -29291255 - MER5A DNA MER1_type -5 184 20 180 0 0 0 chr10 111025645 111025665 -29291100 + (ATG)n Simple_repeat Simple_repeat 1 20 0 2169 100 0 0 chr10 111025836 111026159 -29290606 - AluSg SINE Alu 0 323 1 2283 122 0 0 chr10 111026316 111026627 -29290138 - AluY SINE Alu 0 311 1 1116 286 39 65 chr10 111027839 111028409 -29288356 - L2 LINE L2 -1 3312 2754 26 30 0 0 chr10 111029662 111029695 -29287070 + AT_rich Low_complexity Low_complexity 1 33 0 260 380 8 41 chr10 111029863 111029984 -29286781 + MIR SINE MIR 33 149 -59 421 248 80 18 chr10 111030071 111030184 -29286581 - MIR SINE MIR -109 153 34 722 299 67 38 chr10 111031046 111031387 -29285378 - LTR16A LTR ERVL -10 440 90 331 372 18 24 chr10 111031898 111032062 -29284703 + MER5A DNA MER1_type 26 188 -1 325 214 94 86 chr10 111032481 111032598 -29284167 + MER63 DNA MER1_type 7 750 -86 327 256 12 0 chr10 111032599 111032681 -29284084 + MER63 DNA MER1_type 977 1059 -2 989 201 5 0 chr10 111032716 111032910 -29283855 - L1MB1 LINE L1 -5 6163 5969 1141 183 24 0 chr10 111033025 111033233 -29283532 - MER58A DNA MER1_type -9 215 3 360 0 0 0 chr10 111034256 111034296 -29282469 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2409 84 0 3 chr10 111034900 111035198 -29281567 + AluSx SINE Alu 1 297 -15 4578 237 182 9 chr10 111035821 111037389 -29279376 + L1MA4A LINE L1 1 1840 -5369 * 8073 168 18 11 chr10 111037362 111040057 -29276708 + L1MA4A LINE L1 4635 7359 -6 218 303 40 30 chr10 111040455 111040554 -29276211 + MIR3 SINE MIR 82 181 -27 22 0 0 0 chr10 111042146 111042168 -29274597 + AT_rich Low_complexity Low_complexity 1 22 0 263 346 10 10 chr10 111042269 111042370 -29274395 - MIR3 SINE MIR -27 181 81 450 319 4 12 chr10 111043563 111043796 -29272969 - L1ME LINE L1 -463 5707 5478 4047 163 39 16 chr10 111043810 111044325 -29272440 - L1MA9 LINE L1 0 6312 5770 279 54 0 0 chr10 111044325 111044362 -29272403 + (TG)n Simple_repeat Simple_repeat 2 38 0 4047 163 39 16 chr10 111044362 111044660 -29272105 - L1MA9 LINE L1 -542 5770 5480 411 241 9 61 chr10 111044660 111044872 -29271893 - L1M3e LINE L1 -6258 772 572 245 272 96 24 chr10 111045444 111045569 -29271196 + MLT1I LTR MaLR 250 383 -26 332 314 148 13 chr10 111045688 111045778 -29270987 - L1ME LINE L1 -944 5202 5126 240 35 0 0 chr10 111045778 111045807 -29270958 + (TG)n Simple_repeat Simple_repeat 1 29 0 332 314 148 13 chr10 111045807 111045934 -29270831 - L1ME LINE L1 -1020 5126 4950 1454 154 51 123 chr10 111045934 111046109 -29270656 - AluJb SINE Alu -4 308 167 228 43 65 0 chr10 111046109 111046155 -29270610 + T-rich Low_complexity Low_complexity 2 50 0 1454 154 51 123 chr10 111046155 111046311 -29270454 - AluJb SINE Alu -145 167 1 304 139 0 42 chr10 111046323 111046395 -29270370 + (TTTCC)n Simple_repeat Simple_repeat 5 73 0 207 284 103 58 chr10 111047662 111047817 -29268948 - L2 LINE L2 -167 3105 2944 227 170 0 0 chr10 111047819 111047866 -29268899 + U7 snRNA snRNA 2 48 -15 813 157 41 0 chr10 111048099 111048246 -29268519 + MLT1D LTR MaLR 1 153 -352 1113 192 45 16 chr10 111048295 111048540 -29268225 + MLT1D LTR MaLR 254 505 0 709 303 26 36 chr10 111049090 111049308 -29267457 + MIR SINE MIR 14 225 -37 489 93 53 0 chr10 111049308 111049383 -29267382 - MADE1 DNA Mariner -1 79 1 709 303 26 36 chr10 111049383 111049420 -29267345 + MIR SINE MIR 225 261 -1 399 314 81 29 chr10 111050189 111050361 -29266404 + L1MC4a LINE L1 5749 5929 -1879 2144 117 7 3 chr10 111050635 111050934 -29265831 - AluSq SINE Alu -13 300 1 191 344 0 33 chr10 111052096 111052186 -29264579 - L2 LINE L2 -77 3195 3109 205 167 0 0 chr10 111052263 111052299 -29264466 + (CAT)n Simple_repeat Simple_repeat 3 38 0 278 237 0 17 chr10 111053114 111053173 -29263592 - MIR SINE MIR -114 94 37 21 0 0 0 chr10 111054542 111054563 -29262202 + AT_rich Low_complexity Low_complexity 1 21 0 771 223 126 0 chr10 111056017 111056286 -29260479 - L1MC3 LINE L1 -7 7778 7476 * 9773 161 22 130 chr10 111056281 111057885 -29258880 - L1M1 LINE L1 -5326 2239 841 675 192 130 0 chr10 111057885 111058031 -29258734 + Tigger7 DNA MER2_type 3 167 -538 9773 161 22 130 chr10 111058031 111058785 -29257980 - L1M1 LINE L1 -6724 841 7 2811 241 26 30 chr10 111058792 111059771 -29256994 - L1 LINE L1 -3380 3408 2426 239 0 32 0 chr10 111059771 111059802 -29256963 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1780 174 32 0 chr10 111059804 111060086 -29256679 - AluSx SINE Alu -21 291 1 2811 241 26 30 chr10 111060086 111060538 -29256227 - L1 LINE L1 -4363 2425 1980 2208 250 17 10 chr10 111060538 111061139 -29255626 + L1M2c LINE L1 1382 1986 -4803 323 293 41 41 chr10 111061275 111061422 -29255343 - L1 LINE L1 -6155 634 488 1925 119 17 3 chr10 111061449 111061744 -29255021 - THE1C LTR MaLR -76 299 1 9667 123 52 6 chr10 111061746 111063255 -29253510 - THE1C-int LTR MaLR -2 1578 1 2051 139 26 40 chr10 111063255 111063635 -29253130 - THE1C LTR MaLR 0 375 1 277 314 9 19 chr10 111063635 111063733 -29253032 - L1 LINE L1 -6351 438 340 3490 58 4 9 chr10 111063733 111064183 -29252582 - LTR7 LTR ERV1 -2 448 1 13437 81 4 9 chr10 111064189 111066137 -29250628 - HERVH LTR ERV1 -6 7707 5769 1232 100 0 0 chr10 111066133 111066313 -29250452 - HERVH LTR ERV1 -3046 4667 4488 * 3149 111 4 6 chr10 111066315 111066818 -29249947 - HERVH LTR ERV1 -3720 3993 3492 927 102 27 0 chr10 111066808 111066955 -29249810 - HERVH LTR ERV1 -4423 3290 3140 * 13319 121 13 20 chr10 111066949 111069345 -29247420 - HERVH LTR ERV1 -4726 2987 297 469 118 26 0 chr10 111069498 111069574 -29247191 - HERVH LTR ERV1 -7633 80 3 3357 71 2 9 chr10 111069578 111070029 -29246736 - LTR7 LTR ERV1 -2 448 1 381 352 45 45 chr10 111070029 111070364 -29246401 - L1 LINE L1 -6443 346 12 2243 169 18 25 chr10 111071806 111072243 -29244522 + Tigger2a DNA MER2_type 1 434 0 233 26 0 77 chr10 111072372 111072411 -29244354 + (T)n Simple_repeat Simple_repeat 1 36 0 187 310 56 0 chr10 111072844 111072915 -29243850 + MIR3 SINE MIR 119 193 -15 1879 169 36 25 chr10 111074391 111074751 -29242014 - THE1B LTR MaLR 0 364 1 192 313 15 30 chr10 111075060 111075127 -29241638 + MIR SINE MIR 16 81 -127 270 298 262 7 chr10 111075321 111075600 -29241165 + LTR33A LTR ERVL 174 523 0 1719 193 22 14 chr10 111075688 111076050 -29240715 + MLT1A1 LTR MaLR 1 365 0 468 301 0 9 chr10 111076876 111077031 -29239734 + MIR SINE MIR 4 155 -63 442 297 40 23 chr10 111077136 111077311 -29239454 + MIR SINE MIR 10 187 -75 566 86 0 12 chr10 111077328 111077409 -29239356 + MADE1 DNA Mariner 1 80 0 182 338 50 0 chr10 111078018 111078098 -29238667 + MIR SINE MIR 29 112 -150 1627 278 91 39 chr10 111080229 111080946 -29235819 + L1MCc LINE L1 778 1531 -4892 335 246 91 77 chr10 111081072 111081345 -29235420 + L1MCc LINE L1 1782 3988 -2953 6344 255 78 25 chr10 111081382 111084576 -29232189 - L1MCb LINE L1 -1548 5016 1559 282 268 0 41 chr10 111084607 111084704 -29232061 + L1MC4 LINE L1 6614 6706 -1336 279 191 22 11 chr10 111084704 111084793 -29231972 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 234 290 47 0 chr10 111084809 111084916 -29231849 + L1MC4 LINE L1 6612 6723 -1319 * 3291 198 85 158 chr10 111084897 111086395 -29230370 - L1MCb LINE L1 -4849 1196 7 239 274 8 34 chr10 111086405 111086522 -29230243 + L1M4 LINE L1 3336 3449 -2697 1003 162 0 0 chr10 111086552 111086719 -29230046 + ERVL-B2 LTR ERVL 5592 5758 -6 2047 207 46 14 chr10 111086720 111087155 -29229610 + MLT2B2 LTR ERVL 3 451 -64 292 236 9 9 chr10 111087155 111087261 -29229504 + (TA)n Simple_repeat Simple_repeat 2 107 0 8453 243 58 18 chr10 111087283 111090115 -29226650 + L1M4 LINE L1 2334 5277 -869 1280 220 17 121 chr10 111090128 111090765 -29226000 + L1M4 LINE L1 4735 5305 -841 266 0 0 0 chr10 111090799 111090835 -29225930 - L1PA3 LINE L1 -3 6152 6117 255 261 297 7 chr10 111090909 111091047 -29225718 - MER5A DNA MER1_type -1 188 11 3726 137 34 32 chr10 111091194 111091903 -29224862 + MER67C LTR ERV1 1 710 0 210 279 15 0 chr10 111092055 111092123 -29224642 + (TAAA)n Simple_repeat Simple_repeat 1 69 0 2266 103 0 0 chr10 111092776 111093087 -29223678 - AluSx SINE Alu -1 311 1 22 0 0 0 chr10 111093445 111093467 -29223298 + AT_rich Low_complexity Low_complexity 1 22 0 778 194 19 12 chr10 111093567 111093727 -29223038 - AluSx SINE Alu -140 172 12 299 264 223 34 chr10 111093885 111094033 -29222732 - MER5A DNA MER1_type -2 187 12 498 305 67 43 chr10 111094467 111094677 -29222088 + LTR33 LTR ERVL 1 215 -306 473 282 115 6 chr10 111096028 111096202 -29220563 - MIR SINE MIR -11 251 59 262 238 83 12 chr10 111097768 111097852 -29218913 - MIR SINE MIR -125 137 48 234 0 0 0 chr10 111097914 111097940 -29218825 + (CA)n Simple_repeat Simple_repeat 2 27 0 3948 164 46 27 chr10 111098048 111098511 -29218254 - L1MA8 LINE L1 -33 6258 5772 3248 102 23 0 chr10 111098511 111098990 -29217775 - L1PA10 LINE L1 -1 6167 5678 3948 164 46 27 chr10 111098990 111099336 -29217429 - L1MA8 LINE L1 -519 5772 5434 338 366 61 0 chr10 111101286 111101417 -29215348 + L2 LINE L2 3129 3267 -5 315 323 61 72 chr10 111103495 111103774 -29212991 + LTR16C LTR ERVL 204 479 -12 817 137 0 38 chr10 111103931 111104114 -29212651 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 289 214 36 24 chr10 111104114 111104198 -29212567 + CT-rich Low_complexity Low_complexity 5 89 0 198 302 0 0 chr10 111105300 111105343 -29211422 - L2 LINE L2 -32 3281 3239 185 386 94 16 chr10 111105368 111105495 -29211270 - MIR3 SINE MIR -63 145 9 1791 273 116 8 chr10 111105925 111106720 -29210045 + L1M4 LINE L1 4088 4968 -1178 286 227 124 0 chr10 111106846 111106943 -29209822 + L1M4 LINE L1 4963 5071 -1075 440 270 101 6 chr10 111107168 111107327 -29209438 + MIR SINE MIR 58 231 -31 722 264 63 47 chr10 111107423 111107677 -29209088 + MIR SINE MIR 5 262 0 249 290 75 0 chr10 111108021 111108114 -29208651 - LTR16A1 LTR ERVL -2 455 356 235 106 43 0 chr10 111108093 111108140 -29208625 + Alu SINE Alu 249 297 -2 * 245 273 26 0 chr10 111108158 111108235 -29208530 - LTR16A1 LTR ERVL -72 385 307 255 395 28 0 chr10 111108303 111108412 -29208353 + L2 LINE L2 3184 3295 -18 1540 192 14 11 chr10 111108708 111108994 -29207771 + AluSx SINE Alu 1 287 -25 205 205 0 0 chr10 111109079 111109118 -29207647 - MIR SINE MIR 0 262 224 2972 140 105 64 chr10 111109179 111109882 -29206883 - L1MA5 LINE L1 -10 6290 5547 228 338 132 15 chr10 111109907 111110043 -29206722 - MIR SINE MIR -71 191 40 265 346 10 2 chr10 111110151 111110273 -29206492 - MIR SINE MIR -68 140 19 238 297 27 14 chr10 111110950 111111024 -29205741 + CT-rich Low_complexity Low_complexity 4 78 0 243 396 19 13 chr10 111111926 111112080 -29204685 - MIR3 SINE MIR -5 203 49 316 321 42 42 chr10 111112192 111112382 -29204383 - MIR SINE MIR -64 198 9 21 0 0 0 chr10 111113159 111113180 -29203585 + AT_rich Low_complexity Low_complexity 1 21 0 5056 165 48 12 chr10 111114289 111115426 -29201339 + L1MA8 LINE L1 5112 6287 -4 206 382 0 0 chr10 111115714 111115782 -29200983 + L2 LINE L2 3230 3297 -16 252 268 0 14 chr10 111115785 111115856 -29200909 + A-rich Low_complexity Low_complexity 4 73 0 6403 142 20 26 chr10 111116030 111117957 -29198808 - L1PA10 LINE L1 -17 6151 4234 342 309 90 26 chr10 111117964 111118197 -29198568 - L1ME4a LINE L1 -9 6112 5865 494 290 182 37 chr10 111118212 111118360 -29198405 + L1ME LINE L1 2 127 -5943 1240 222 28 74 chr10 111118360 111118752 -29198013 - MLT1A2 LTR MaLR 0 374 1 494 290 182 37 chr10 111118752 111119120 -29197645 + L1ME LINE L1 127 593 -5477 772 276 65 8 chr10 111119126 111119387 -29197378 + MLT2F LTR ERVL 1 276 -387 368 293 131 5 chr10 111119439 111119628 -29197137 + MLT2F LTR ERVL 150 599 -64 181 229 66 82 chr10 111119636 111119697 -29197068 + MIR SINE MIR 125 184 -78 248 330 85 17 chr10 111120063 111120181 -29196584 + L2 LINE L2 3136 3261 -11 375 60 0 0 chr10 111120705 111120755 -29196010 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 136 23 0 chr10 111122309 111122353 -29194412 + GA-rich Low_complexity Low_complexity 1 45 0 728 184 36 36 chr10 111122413 111122581 -29194184 + MER5A DNA MER1_type 1 168 -21 213 309 153 79 chr10 111122575 111122928 -29193837 - L3 LINE CR1 -242 1335 957 * 1830 182 14 22 chr10 111122995 111123364 -29193401 + MER47A DNA MER2_type 1 366 0 225 305 74 21 chr10 111123855 111123950 -29192815 + MIR SINE MIR 43 142 -66 208 26 0 77 chr10 111125734 111125773 -29190992 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 250 320 21 10 chr10 111125999 111126096 -29190669 - MER117 DNA MER1_type -81 116 19 180 0 0 0 chr10 111126096 111126116 -29190649 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 213 288 136 42 chr10 111126728 111126846 -29189919 - L2 LINE L2 -5 3308 3180 223 174 22 0 chr10 111127021 111127067 -29189698 + L2 LINE L2 3267 3313 0 636 184 0 0 chr10 111127191 111127316 -29189449 - L1MA10 LINE L1 -1 6333 6209 288 119 60 0 chr10 111127461 111127528 -29189237 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 270 113 0 32 chr10 111128716 111128778 -29187987 - L1MA7 LINE L1 -6 6285 6226 * 400 217 62 13 chr10 111128755 111128887 -29187878 - L1MA7 LINE L1 -197 6094 5975 226 349 62 0 chr10 111129462 111129591 -29187174 + MIR SINE MIR 60 196 -66 181 351 72 54 chr10 111129679 111129790 -29186975 + L2 LINE L2 3143 3255 -17 280 322 78 50 chr10 111130731 111130911 -29185854 - MIR3 SINE MIR -15 193 9 21 36 0 0 chr10 111131594 111131622 -29185143 + AT_rich Low_complexity Low_complexity 1 28 0 1504 210 13 16 chr10 111131665 111131975 -29184790 + AluJo SINE Alu 1 309 -3 2483 48 0 0 chr10 111132263 111132555 -29184210 - AluY SINE Alu -19 292 1 850 268 133 30 chr10 111133712 111134112 -29182653 + LTR33 LTR ERVL 3 443 -78 5758 152 13 16 chr10 111135206 111136356 -29180409 + Tigger3b DNA MER2_type 1 1231 0 258 296 22 59 chr10 111136850 111136985 -29179780 - MIR SINE MIR -84 178 49 701 215 241 68 chr10 111137044 111137384 -29179381 - MER57A LTR ERV1 -4 399 1 223 357 36 0 chr10 111137570 111137654 -29179111 - MER5A DNA MER1_type -47 142 56 1636 166 46 0 chr10 111138504 111138788 -29177977 + AluJb SINE Alu 16 312 0 2381 100 3 0 chr10 111138802 111139113 -29177652 + AluSp SINE Alu 1 312 -1 383 38 19 0 chr10 111140514 111140567 -29176198 + (TA)n Simple_repeat Simple_repeat 2 55 0 236 263 53 15 chr10 111140965 111141098 -29175667 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 617 286 110 33 chr10 111141117 111141544 -29175221 + L1ME3 LINE L1 5492 5951 -211 1312 177 81 34 chr10 111141550 111141872 -29174893 + MER44D DNA MER2_type 1 607 -2 919 176 59 139 chr10 111142044 111142482 -29174283 - MER57A LTR ERV1 0 403 1 29 60 0 0 chr10 111142502 111142552 -29174213 + AT_rich Low_complexity Low_complexity 1 50 0 549 60 24 0 chr10 111142768 111142852 -29173913 + MER44D DNA MER2_type 536 621 -84 390 282 120 0 chr10 111142979 111143121 -29173644 + MIR SINE MIR 38 196 -66 22 0 0 0 chr10 111143136 111143158 -29173607 + AT_rich Low_complexity Low_complexity 1 22 0 330 281 135 25 chr10 111143652 111144016 -29172749 - L1M4c LINE L1 -3717 2927 2562 479 284 50 30 chr10 111144383 111144782 -29171983 - L1M4c LINE L1 -3997 2649 2276 1586 226 40 62 chr10 111144831 111145345 -29171420 - MLT1D LTR MaLR -8 547 1 782 257 61 34 chr10 111145382 111145709 -29171056 - L1M4c LINE L1 -4627 2019 1684 21 57 0 0 chr10 111145709 111145744 -29171021 + AT_rich Low_complexity Low_complexity 1 35 0 560 205 95 38 chr10 111145764 111145974 -29170791 - L1M4c LINE L1 -5218 1324 1103 336 232 30 0 chr10 111145960 111146059 -29170706 - L1M4c LINE L1 -6425 117 16 * 465 325 26 10 chr10 111149073 111149267 -29167498 + ERVL LTR ERVL 1520 1716 -4048 272 283 55 48 chr10 111149317 111149462 -29167303 + ERVL LTR ERVL 1738 1883 -3113 442 329 11 13 chr10 111149488 111149675 -29167090 + ERVL LTR ERVL 1943 2155 -2870 28 102 0 0 chr10 111149688 111149786 -29166979 + AT_rich Low_complexity Low_complexity 1 98 0 367 313 114 9 chr10 111149790 111150001 -29166764 - L1MEd LINE L1 -4306 2004 1772 1516 296 28 33 chr10 111150003 111150024 -29166741 - L1MEd LINE L1 -4576 1734 1714 6997 55 38 22 chr10 111150024 111151108 -29165657 - L1PA8 LINE L1 -5 6167 5080 1516 296 28 33 chr10 111151108 111151902 -29164863 - L1MEd LINE L1 -4596 1714 895 337 279 52 15 chr10 111152162 111152298 -29164467 - L1MEd LINE L1 -5855 264 124 400 264 47 0 chr10 111152309 111152415 -29164350 + ERVL LTR ERVL 2167 2277 -3487 392 329 38 29 chr10 111152648 111152888 -29163877 + ERVL LTR ERVL 2506 2747 -2249 633 391 47 28 chr10 111153187 111153879 -29162886 + ERVL LTR ERVL 3752 4472 -1182 3515 128 2 28 chr10 111153879 111154420 -29162345 + MER1A DNA MER1_type 1 527 0 633 391 47 28 chr10 111154420 111154785 -29161980 + ERVL LTR ERVL 4472 4829 -825 253 259 94 12 chr10 111154850 111154935 -29161830 + ERVL LTR ERVL 4907 4998 -766 3120 137 120 48 chr10 111155577 111156269 -29160496 + LTR48 LTR ERV1 1 742 -45 432 333 39 26 chr10 111156357 111156588 -29160177 + LTR16C LTR ERVL 256 489 -2 21 36 0 0 chr10 111160038 111160066 -29156699 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 111160571 111160593 -29156172 + AT_rich Low_complexity Low_complexity 1 22 0 24701 158 18 26 chr10 111161609 111167999 -29148766 + L1PA10 LINE L1 1 6479 -4 23 54 0 0 chr10 111168156 111168193 -29148572 + AT_rich Low_complexity Low_complexity 1 37 0 1647 161 197 11 chr10 111168199 111168560 -29148205 - MSTA LTR MaLR 0 428 1 1427 207 3 3 chr10 111168618 111168908 -29147857 + AluJo SINE Alu 3 292 -20 277 317 126 18 chr10 111170072 111170239 -29146526 + L2 LINE L2 3124 3308 -5 1737 149 0 34 chr10 111170398 111170693 -29146072 - AluSx SINE Alu -5 307 23 22 0 0 0 chr10 111170709 111170731 -29146034 + AT_rich Low_complexity Low_complexity 1 22 0 770 240 31 52 chr10 111172805 111172877 -29143888 + MER58A DNA MER1_type 1 73 -2347 2205 88 7 10 chr10 111172877 111173174 -29143591 + AluSx SINE Alu 14 309 -3 770 240 31 52 chr10 111173174 111173330 -29143435 + MER58A DNA MER1_type 73 224 0 1391 188 34 48 chr10 111175399 111175691 -29141074 - AluJb SINE Alu -13 289 2 817 154 0 29 chr10 111175704 111175840 -29140925 - FLAM_C SINE Alu -1 132 1 673 264 120 60 chr10 111176051 111176434 -29140331 - L2 LINE L2 0 3313 2908 822 369 86 13 chr10 111176481 111177096 -29139669 - L2 LINE L2 -492 2822 2163 21 0 0 0 chr10 111177102 111177123 -29139642 + AT_rich Low_complexity Low_complexity 1 21 0 328 204 6 23 chr10 111177138 111177314 -29139451 + (TA)n Simple_repeat Simple_repeat 1 173 0 212 273 8 0 chr10 111177332 111177464 -29139301 + (TA)n Simple_repeat Simple_repeat 2 134 0 214 225 134 117 chr10 111177496 111177803 -29138962 - L2 LINE L2 -1212 2102 1791 315 367 34 34 chr10 111179417 111179624 -29137141 - MIR SINE MIR -55 207 1 356 288 60 82 chr10 111179643 111179827 -29136938 + MIR SINE MIR 27 206 -56 34 79 0 0 chr10 111179832 111179908 -29136857 + AT_rich Low_complexity Low_complexity 1 76 0 319 272 37 25 chr10 111180970 111181132 -29135633 - MER103 DNA DNA 0 166 3 27 81 0 0 chr10 111181588 111181650 -29135115 + AT_rich Low_complexity Low_complexity 1 62 0 976 179 0 0 chr10 111181770 111181932 -29134833 + AluSg/x SINE Alu 137 298 -14 594 222 66 50 chr10 111182011 111182209 -29134556 - L2 LINE L2 -1 3312 3112 500 286 40 56 chr10 111182192 111182444 -29134321 - L2 LINE L2 -76 3237 2990 * 300 292 125 31 chr10 111182448 111182640 -29134125 - L1MC/D LINE L1 -2045 5763 5554 1517 283 40 10 chr10 111182977 111183596 -29133169 + L1ME1 LINE L1 2153 2790 -3356 1110 238 111 22 chr10 111183597 111183991 -29132774 + MSTB2 LTR MaLR 10 457 0 999 227 13 0 chr10 111183991 111184229 -29132536 + L1ME1 LINE L1 2792 3032 -3114 1224 176 55 85 chr10 111184229 111184593 -29132172 + L1ME1 LINE L1 5542 5894 -272 382 279 43 34 chr10 111184594 111184802 -29131963 - L1MC/D LINE L1 -2045 4101 3892 315 0 0 0 chr10 111185642 111185677 -29131088 + (CA)n Simple_repeat Simple_repeat 1 35 0 436 226 0 0 chr10 111185721 111185805 -29130960 - AluJ/FLAM SINE Alu -228 84 1 1302 187 12 94 chr10 111185896 111186227 -29130538 - AluJo SINE Alu -8 304 1 288 191 63 16 chr10 111186827 111186890 -29129875 + MIR3 SINE MIR 115 180 -28 2804 201 14 3 chr10 111187629 111188212 -29128553 - L1MB2 LINE L1 -2 6169 5581 1034 153 0 6 chr10 111188221 111188391 -29128374 + MLT1A1 LTR MaLR 1 169 -196 58 28 0 0 chr10 111188635 111188707 -29128058 + AT_rich Low_complexity Low_complexity 1 72 0 230 290 54 0 chr10 111191926 111192019 -29124746 + (TGAA)n Simple_repeat Simple_repeat 1 98 0 643 308 51 24 chr10 111192019 111192370 -29124395 - L2 LINE L2 -195 3118 2770 1977 158 118 9 chr10 111192905 111193356 -29123409 + Tigger3(Golem) DNA MER2_type 1 402 -2627 230 81 27 0 chr10 111193356 111193393 -29123372 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 1977 158 118 9 chr10 111193393 111193473 -29123292 + Tigger3(Golem) DNA MER2_type 402 2769 -260 400 200 24 12 chr10 111193470 111193555 -29123210 + Tigger3(Golem) DNA MER2_type 2942 3027 -2 * 906 208 99 0 chr10 111194356 111194558 -29122207 - MER58A DNA MER1_type 0 224 3 274 374 123 12 chr10 111194881 111195052 -29121713 + MIR3 SINE MIR 16 205 -3 317 246 0 0 chr10 111195796 111195861 -29120904 - MER94 DNA DNA -8 126 62 1494 269 26 24 chr10 111197114 111197575 -29119190 + MLT1C LTR MaLR 1 462 -5 441 344 53 5 chr10 111197688 111197877 -29118888 + MIR SINE MIR 1 198 -64 4893 165 76 22 chr10 111197910 111198831 -29117934 + L1MA9 LINE L1 4158 5027 -1285 1555 182 37 27 chr10 111198831 111199127 -29117638 + AluJb SINE Alu 3 301 -11 4893 165 76 22 chr10 111199127 111199960 -29116805 + L1MA9 LINE L1 5027 6034 -278 978 171 83 0 chr10 111199969 111200185 -29116580 - L1MA9 LINE L1 -1 6311 6078 801 202 132 12 chr10 111200208 111200451 -29116314 + L1MA9 LINE L1 6019 6290 -22 249 57 0 0 chr10 111200885 111200920 -29115845 + (TG)n Simple_repeat Simple_repeat 1 35 0 249 83 0 0 chr10 111201611 111201647 -29115118 + (CA)n Simple_repeat Simple_repeat 1 36 0 307 62 62 0 chr10 111201728 111201776 -29114989 - L1MA9 LINE L1 -33 6279 6229 947 169 108 8 chr10 111201777 111202021 -29114744 + MER47A DNA MER2_type 1 366 0 1137 151 75 5 chr10 111202069 111202281 -29114484 - L1MA9 LINE L1 -231 6081 5855 197 370 103 9 chr10 111202780 111203004 -29113761 + L3 LINE CR1 1244 1488 -89 288 0 0 0 chr10 111203020 111203052 -29113713 + (TG)n Simple_repeat Simple_repeat 2 33 0 414 331 8 8 chr10 111204013 111204137 -29112628 + L2 LINE L2 3190 3313 0 559 301 142 0 chr10 111204593 111204812 -29111953 + MIR SINE MIR 5 254 -8 187 330 124 10 chr10 111205148 111205245 -29111520 - MIR3 SINE MIR -13 195 88 308 350 81 0 chr10 111205790 111205913 -29110852 - L2 LINE L2 0 3272 3140 264 279 51 0 chr10 111206851 111206930 -29109835 - L2 LINE L2 -2 3311 3229 324 0 0 0 chr10 111207269 111207305 -29109460 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr10 111207362 111207386 -29109379 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr10 111207691 111207723 -29109042 + (CA)n Simple_repeat Simple_repeat 1 32 0 280 315 70 67 chr10 111207833 111208386 -29108379 + L1MEd LINE L1 501 1055 -5064 828 254 40 0 chr10 111208395 111208572 -29108193 + MER5A DNA MER1_type 1 184 -5 437 261 72 62 chr10 111208577 111208772 -29107993 + L1MEd LINE L1 1061 1257 -4862 4772 258 74 42 chr10 111208853 111211236 -29105529 + L1M4b LINE L1 2 2463 -4496 322 200 0 0 chr10 111211314 111211369 -29105396 + Tigger5 DNA MER2_type 1 55 -2268 * 360 192 14 14 chr10 111211338 111211411 -29105354 + Tigger5 DNA MER2_type 2251 2323 0 243 167 278 0 chr10 111211459 111211531 -29105234 + Tigger5 DNA MER2_type 2232 2323 0 27 49 0 0 chr10 111211706 111211747 -29105018 + AT_rich Low_complexity Low_complexity 1 41 0 3680 258 79 43 chr10 111211758 111213891 -29102874 + L1M4b LINE L1 2643 4813 -2144 1725 256 46 35 chr10 111214182 111214808 -29101957 + L1M4 LINE L1 3465 4097 -2049 216 0 0 0 chr10 111215724 111215748 -29101017 + (A)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr10 111216071 111216098 -29100667 + (A)n Simple_repeat Simple_repeat 1 27 0 207 337 82 0 chr10 111217004 111217102 -29099663 - L3 LINE CR1 -166 1411 1306 2197 111 0 0 chr10 111218746 111219044 -29097721 - AluSq SINE Alu -15 298 1 293 420 7 0 chr10 111219126 111219276 -29097489 + MLT1K LTR MaLR 109 259 -329 534 296 37 57 chr10 111219882 111220139 -29096626 - MIR SINE MIR -2 260 9 225 350 0 10 chr10 111220272 111220369 -29096396 + MIR3 SINE MIR 111 206 -2 210 292 42 14 chr10 111220544 111220616 -29096149 - L2 LINE L2 0 3272 3199 420 71 0 0 chr10 111220843 111220899 -29095866 + (CA)n Simple_repeat Simple_repeat 1 56 0 2152 108 7 3 chr10 111223284 111223589 -29093176 + AluSc SINE Alu 1 306 -3 2229 33 44 11 chr10 111224676 111224978 -29091787 - AluY SINE Alu 0 311 1 21 0 0 0 chr10 111225786 111225807 -29090958 + AT_rich Low_complexity Low_complexity 1 21 0 408 271 76 0 chr10 111225807 111225925 -29090840 + L3 LINE CR1 599 725 -852 210 294 54 43 chr10 111227038 111227130 -29089635 - L2 LINE L2 -90 3182 3090 21 0 0 0 chr10 111227489 111227510 -29089255 + AT_rich Low_complexity Low_complexity 1 21 0 247 257 88 47 chr10 111227519 111227667 -29089098 - L1ME4a LINE L1 -201 5920 5767 206 182 36 0 chr10 111228578 111228633 -29088132 + (CATA)n Simple_repeat Simple_repeat 2 58 0 213 272 184 9 chr10 111228639 111228753 -29088012 - MIR SINE MIR -17 245 112 1016 151 0 28 chr10 111228828 111229007 -29087758 - AluSg/x SINE Alu -2 310 137 182 325 100 25 chr10 111229084 111229164 -29087601 - MIR SINE MIR -13 249 164 2104 130 13 0 chr10 111229367 111229667 -29087098 + AluSx SINE Alu 1 304 -8 442 240 56 84 chr10 111231712 111231891 -29084874 - L2 LINE L2 0 3313 3140 707 171 0 8 chr10 111232336 111232465 -29084300 - FLAM_C SINE Alu -15 128 1 830 297 59 62 chr10 111232740 111233252 -29083513 - LTR33A LTR ERVL -11 512 3 271 239 28 0 chr10 111234019 111234090 -29082675 - HsTC2 DNA Tc2 -1823 75 3 524 289 107 10 chr10 111234117 111234314 -29082451 - MIR SINE MIR -1 261 46 254 146 0 18 chr10 111234499 111234554 -29082211 + (CA)n Simple_repeat Simple_repeat 1 54 0 220 290 214 15 chr10 111235380 111235511 -29081254 + MIR3 SINE MIR 37 193 -15 2240 119 0 3 chr10 111235599 111235910 -29080855 - AluSg SINE Alu 0 310 1 1104 193 5 14 chr10 111236668 111236875 -29079890 + MLT1A1 LTR MaLR 161 365 0 318 26 0 0 chr10 111237100 111237139 -29079626 + (CA)n Simple_repeat Simple_repeat 1 39 0 273 244 165 39 chr10 111237356 111237483 -29079282 + MIR SINE MIR 117 259 -3 472 258 0 0 chr10 111239034 111239131 -29077634 + MER5A DNA MER1_type 10 106 -83 456 220 0 22 chr10 111239157 111239248 -29077517 - MER5B DNA MER1_type -33 145 57 502 205 11 3 chr10 111239278 111239387 -29077378 + L1MA8 LINE L1 6168 6266 -25 586 219 50 0 chr10 111239398 111239517 -29077248 + MER5A DNA MER1_type 65 189 0 303 280 48 42 chr10 111239721 111239889 -29076876 + MLT1K LTR MaLR 383 551 -37 265 376 75 0 chr10 111239950 111240083 -29076682 - L3 LINE CR1 -83 1494 1352 268 319 138 0 chr10 111240652 111240790 -29075975 + MIR SINE MIR 98 254 -8 225 364 87 10 chr10 111240941 111241136 -29075629 - L3 LINE CR1 -643 934 725 1339 131 50 14 chr10 111241195 111241417 -29075348 + MER30 DNA MER1_type 1 230 0 185 300 0 17 chr10 111241417 111241468 -29075297 - L2 LINE L2 -84 3229 3178 1753 218 33 33 chr10 111242791 111243015 -29073750 + MLT2B2 LTR ERVL 1 219 -335 195 42 0 0 chr10 111243015 111243039 -29073726 + (TC)n Simple_repeat Simple_repeat 2 25 0 1753 218 33 33 chr10 111243039 111243262 -29073503 + MLT2B2 LTR ERVL 219 440 -114 631 23 46 0 chr10 111243272 111243359 -29073406 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 499 102 23 0 chr10 111243383 111243471 -29073294 + (GA)n Simple_repeat Simple_repeat 2 91 0 4220 190 36 13 chr10 111243601 111244527 -29072238 - L1MA9 LINE L1 0 6312 5366 326 278 98 64 chr10 111245476 111245771 -29070994 - L1MC/D LINE L1 -2244 5564 5260 2135 46 50 50 chr10 111245847 111246130 -29070635 - AluY SINE Alu -15 296 14 288 0 0 0 chr10 111246305 111246337 -29070428 + (TG)n Simple_repeat Simple_repeat 2 33 0 331 286 92 0 chr10 111246391 111246510 -29070255 - LTR33 LTR ERVL -3 518 389 709 187 39 50 chr10 111246804 111246986 -29069779 + MER33 DNA MER1_type 9 188 -136 1990 86 3 92 chr10 111246991 111247316 -29069449 - AluSc SINE Alu -13 296 1 255 60 120 20 chr10 111247316 111247366 -29069399 + MER33 DNA MER1_type 281 335 -28 22 35 0 0 chr10 111247463 111247492 -29069273 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 111247737 111247765 -29069000 + AT_rich Low_complexity Low_complexity 1 28 0 597 306 114 56 chr10 111247824 111248728 -29068037 - L1MC/D LINE L1 -1624 4522 3554 266 253 103 34 chr10 111248913 111249146 -29067619 - L1MC/D LINE L1 -2982 3164 2916 21 57 0 0 chr10 111249662 111249697 -29067068 + AT_rich Low_complexity Low_complexity 1 35 0 1798 261 28 59 chr10 111249914 111249952 -29066813 + MLT1E LTR MaLR 4 42 -551 2501 102 3 19 chr10 111249952 111250313 -29066452 + THE1A LTR MaLR 1 355 0 1798 261 28 59 chr10 111250313 111250883 -29065882 + MLT1E LTR MaLR 42 593 0 288 227 80 0 chr10 111250885 111250988 -29065777 - L1ME2 LINE L1 -191 5973 5864 2065 138 3 3 chr10 111251047 111251359 -29065406 - AluJb SINE Alu 0 312 1 405 167 0 0 chr10 111252216 111252294 -29064471 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 263 0 152 chr10 111252294 111252393 -29064372 + MIR3 SINE MIR 82 165 -43 2285 111 3 0 chr10 111254452 111254759 -29062006 + AluSx SINE Alu 1 308 -4 262 325 211 0 chr10 111255365 111255531 -29061234 - L3 LINE CR1 -12 1565 1365 236 204 20 0 chr10 111255544 111255593 -29061172 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 2021 198 23 8 chr10 111255594 111255989 -29060776 - L1MC1 LINE L1 -38 6295 5895 324 325 76 13 chr10 111255997 111256154 -29060611 - L3 LINE CR1 -242 1335 1169 216 250 0 0 chr10 111256691 111256739 -29060026 - MIR SINE MIR -147 115 68 36 40 0 0 chr10 111256765 111256815 -29059950 + AT_rich Low_complexity Low_complexity 1 50 0 650 350 38 0 chr10 111257951 111258268 -29058497 - ERVL LTR ERVL -1146 4618 4290 381 310 39 63 chr10 111259875 111260130 -29056635 - L2 LINE L2 -12 3301 3053 2278 96 0 22 chr10 111260130 111260443 -29056322 + AluSc SINE Alu 1 306 -3 582 290 106 5 chr10 111260452 111260669 -29056096 - L2 LINE L2 -367 2947 2709 258 81 0 0 chr10 111260821 111260858 -29055907 + (GA)n Simple_repeat Simple_repeat 2 38 0 2043 259 58 33 chr10 111261477 111262049 -29054716 + MLT1E LTR MaLR 8 593 0 728 79 0 0 chr10 111262140 111262241 -29054524 + AluSp/q SINE Alu 208 308 -5 200 378 14 0 chr10 111262750 111262824 -29053941 + MIR SINE MIR 33 107 -155 383 329 71 32 chr10 111262881 111263133 -29053632 + MIR SINE MIR 1 262 0 506 315 60 11 chr10 111263544 111263728 -29053037 + MIR SINE MIR 3 195 -67 734 325 104 28 chr10 111263744 111264214 -29052551 + LTR33 LTR ERVL 1 506 -15 192 309 0 0 chr10 111264222 111264277 -29052488 + MIR SINE MIR 208 262 0 667 308 61 75 chr10 111266912 111267421 -29049344 - L2 LINE L2 0 3313 2812 1563 219 54 16 chr10 111267504 111267874 -29048891 - MLT1B LTR MaLR -6 384 1 357 226 73 48 chr10 111268562 111268686 -29048079 - MIR SINE MIR -86 176 50 19602 32 3 0 chr10 111268957 111272087 -29044678 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 111272162 111272207 -29044558 + (CA)n Simple_repeat Simple_repeat 1 45 0 25 31 0 0 chr10 111273168 111273200 -29043565 + AT_rich Low_complexity Low_complexity 1 32 0 681 317 77 57 chr10 111273319 111273847 -29042918 - L2 LINE L2 -3 3310 2762 363 316 35 26 chr10 111273979 111274093 -29042672 + L2 LINE L2 3158 3272 0 289 337 0 20 chr10 111274102 111274203 -29042562 + MIR SINE MIR 2 100 -162 706 186 0 0 chr10 111274915 111275039 -29041726 - FLAM_C SINE Alu -19 124 1 597 195 59 18 chr10 111275149 111275318 -29041447 - MER96B DNA MER1_type? -241 176 1 21 36 0 0 chr10 111275342 111275370 -29041395 + AT_rich Low_complexity Low_complexity 1 28 0 219 216 0 0 chr10 111275415 111275452 -29041313 + (CA)n Simple_repeat Simple_repeat 1 37 0 25 0 0 0 chr10 111275950 111275975 -29040790 + AT_rich Low_complexity Low_complexity 1 25 0 1854 157 3 10 chr10 111275977 111276263 -29040502 + AluJo SINE Alu 1 286 -26 405 0 0 0 chr10 111276263 111276308 -29040457 + (CA)n Simple_repeat Simple_repeat 2 46 0 1854 157 3 10 chr10 111276308 111276334 -29040431 + AluJo SINE Alu 286 311 -1 1020 253 14 90 chr10 111278885 111279241 -29037524 - MER93a LTR ERV1 0 402 74 216 312 72 43 chr10 111279885 111280023 -29036742 + MIR SINE MIR 11 152 -110 310 312 101 0 chr10 111280412 111280521 -29036244 + L2 LINE L2 3194 3313 0 247 221 105 53 chr10 111281575 111281670 -29035095 - MIR SINE MIR -62 146 47 852 221 0 6 chr10 111281712 111281875 -29034890 + FAM SINE Alu 1 162 -13 2674 39 0 0 chr10 111282158 111282465 -29034300 - AluY SINE Alu -4 307 1 182 361 71 44 chr10 111282488 111282671 -29034094 + MIR3 SINE MIR 16 203 -5 1650 161 76 48 chr10 111284276 111284630 -29032135 - THE1B LTR MaLR 0 364 1 909 74 0 0 chr10 111285124 111285246 -29031519 + (TA)n Simple_repeat Simple_repeat 2 123 0 460 116 58 0 chr10 111285937 111286023 -29030742 + L1MA5A LINE L1 6207 6297 0 456 209 122 14 chr10 111286677 111286816 -29029949 - L1MD3 LINE L1 0 7995 7842 1530 229 63 7 chr10 111286816 111287227 -29029538 - L1MC4a LINE L1 -299 7509 7076 338 71 0 0 chr10 111287397 111287439 -29029326 - MSTA LTR MaLR 0 428 387 2400 93 0 10 chr10 111287440 111287752 -29029013 + AluSq SINE Alu 1 309 -4 2345 143 25 5 chr10 111287778 111288171 -29028594 - MSTA LTR MaLR -27 401 1 354 98 0 0 chr10 111289061 111289071 -29027694 + (CA)n Simple_repeat Simple_repeat 1 61 0 354 98 0 0 chr10 111289071 111289122 -29027643 + (CA)n Simple_repeat Simple_repeat 2 52 0 24 53 0 0 chr10 111289181 111289219 -29027546 + AT_rich Low_complexity Low_complexity 1 38 0 286 305 25 25 chr10 111290459 111290577 -29026188 - MER94 DNA DNA -13 121 4 418 246 82 0 chr10 111290910 111291044 -29025721 + MER104 DNA Tc2 4 148 -32 1737 212 58 48 chr10 111291265 111291765 -29025000 + MLT1D LTR MaLR 1 505 0 214 361 23 7 chr10 111291780 111292004 -29024761 + L2 LINE L2 2730 3015 -257 199 238 50 50 chr10 111292247 111292327 -29024438 - MIR SINE MIR -127 135 56 861 59 0 0 chr10 111292663 111292781 -29023984 - L1P LINE L1 -3016 3130 3013 344 211 79 53 chr10 111293053 111293167 -29023598 + MIR SINE MIR 50 166 -96 2043 259 58 33 chr10 111295827 111296399 -29020366 + MLT1E LTR MaLR 8 593 0 625 124 0 0 chr10 111296490 111296587 -29020178 + AluSp/q SINE Alu 208 304 -9 225 309 18 36 chr10 111296998 111297108 -29019657 - MIR SINE MIR -128 134 27 314 329 31 43 chr10 111297951 111298113 -29018652 + MIR SINE MIR 10 144 -64 7244 34 16 0 chr10 111298701 111300202 -29016563 + L1PA4 LINE L1 4643 6154 -1 1535 207 12 61 chr10 111300215 111300625 -29016140 + MLT2C1 LTR ERVL 1 390 -7 6150 245 51 22 chr10 111300680 111302816 -29013949 + ERVL-C1 LTR ERVL 25 2292 -3472 1172 185 10 22 chr10 111302817 111303117 -29013648 + ERVL-C1 LTR ERVL 2425 2806 -2958 192 350 19 0 chr10 111303331 111303434 -29013331 + L2 LINE L2 2911 3015 -257 206 345 246 0 chr10 111303545 111303655 -29013110 + L2 LINE L2 3134 3270 -2 245 281 11 22 chr10 111303676 111303765 -29013000 - MIR SINE MIR -128 134 47 299 337 31 43 chr10 111304629 111304791 -29011974 + MIR SINE MIR 10 144 -64 238 175 0 0 chr10 111305328 111305368 -29011397 - Alu SINE Alu -239 63 24 195 368 11 11 chr10 111306121 111306208 -29010557 + MIR SINE MIR 56 142 -120 390 353 26 56 chr10 111306872 111307104 -29009661 - MER115 DNA AcHobo -425 268 44 1531 106 13 34 chr10 111307214 111307449 -29009316 - MER30 DNA MER1_type 0 230 1 375 333 46 7 chr10 111307969 111308122 -29008643 + MIR3 SINE MIR 37 195 -13 270 0 0 0 chr10 111308228 111308258 -29008507 + (A)n Simple_repeat Simple_repeat 1 30 0 2187 110 10 10 chr10 111309183 111309491 -29007274 + AluSx SINE Alu 1 308 -4 201 258 0 0 chr10 111309513 111309633 -29007132 + (TA)n Simple_repeat Simple_repeat 1 120 0 316 211 0 115 chr10 111309650 111309754 -29007011 - L1MC4 LINE L1 -1337 6705 6614 567 250 0 4 chr10 111309770 111310257 -29006508 + (TA)n Simple_repeat Simple_repeat 1 485 0 21 0 0 0 chr10 111310510 111310531 -29006234 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 111311124 111311146 -29005619 + AT_rich Low_complexity Low_complexity 1 22 0 2167 126 26 0 chr10 111312373 111312675 -29004090 + AluSx SINE Alu 1 310 -2 313 306 0 83 chr10 111312793 111312914 -29003851 + L2 LINE L2 3199 3309 -4 1701 158 20 17 chr10 111313536 111313833 -29002932 + AluJo SINE Alu 1 298 -14 846 224 73 8 chr10 111314025 111314170 -29002595 + L1MA8 LINE L1 6008 6142 -149 243 0 0 0 chr10 111314170 111314197 -29002568 + (CA)n Simple_repeat Simple_repeat 1 27 0 846 224 73 8 chr10 111314197 111314310 -29002455 + L1MA8 LINE L1 6142 6283 -8 291 247 60 60 chr10 111314778 111314928 -29001837 + L1MC/D LINE L1 5667 5816 -1992 180 244 0 0 chr10 111316091 111316132 -29000633 - L2 LINE L2 -83 3230 3190 10161 248 85 21 chr10 111316364 111316977 -28999788 + L1MC2 LINE L1 35 607 -5737 9175 26 6 1 chr10 111316977 111318843 -28997922 + L1PA4 LINE L1 4281 6154 -1 10161 248 85 21 chr10 111318843 111319656 -28997109 + L1MC2 LINE L1 607 1366 -4978 312 197 26 13 chr10 111319656 111319732 -28997033 + MADE1 DNA Mariner 4 80 0 10161 248 85 21 chr10 111319732 111323150 -28993615 + L1MC2 LINE L1 1366 5515 -829 2339 78 3 3 chr10 111323150 111323456 -28993309 + AluY SINE Alu 1 306 -5 10161 248 85 21 chr10 111323456 111323894 -28992871 + L1MC2 LINE L1 5515 5923 -421 1081 214 24 0 chr10 111324530 111324740 -28992025 - MER20 DNA MER1_type -4 215 1 285 299 104 28 chr10 111324946 111325090 -28991675 - MIR SINE MIR -10 252 98 905 119 8 0 chr10 111325090 111325216 -28991549 + AluSq/x SINE Alu 1 127 -185 1898 149 0 7 chr10 111325227 111325515 -28991250 + AluSx SINE Alu 1 286 -26 684 170 71 0 chr10 111326163 111326304 -28990461 - L1ME3A LINE L1 -12 6158 6008 440 277 96 30 chr10 111326786 111326952 -28989813 + MER5B DNA MER1_type 2 178 0 1569 196 0 0 chr10 111327479 111327745 -28989020 - AluJo SINE Alu -46 266 1 27 62 0 0 chr10 111328139 111328187 -28988578 + AT_rich Low_complexity Low_complexity 1 48 0 1682 234 68 20 chr10 111328344 111328801 -28987964 - MLT1D LTR MaLR -26 479 1 36 0 0 0 chr10 111329360 111329396 -28987369 + AT_rich Low_complexity Low_complexity 1 36 0 1802 172 7 0 chr10 111329548 111329839 -28986926 + AluSq SINE Alu 12 304 -9 732 116 27 0 chr10 111329860 111329972 -28986793 + AluJb SINE Alu 9 123 -189 186 43 0 0 chr10 111329989 111330012 -28986753 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 3808 136 15 145 chr10 111330459 111331495 -28985270 + MER4D LTR ERV1 2 903 0 199 324 45 63 chr10 111331693 111331804 -28984961 + MIR3 SINE MIR 94 202 -6 252 86 0 0 chr10 111332261 111332296 -28984469 + (CA)n Simple_repeat Simple_repeat 2 36 0 813 265 57 5 chr10 111333739 111333950 -28982815 + MIR SINE MIR 31 252 -10 1464 194 47 0 chr10 111333997 111334316 -28982449 - MER58B DNA MER1_type -2 339 6 2056 174 31 7 chr10 111334662 111335067 -28981698 + MSTA LTR MaLR 21 428 0 375 216 53 13 chr10 111335131 111335261 -28981504 - MIR SINE MIR -63 145 41 1471 165 61 61 chr10 111335550 111335847 -28980918 + AluJo SINE Alu 1 297 -15 1915 169 28 34 chr10 111335868 111336428 -28980337 + MLT2A2 LTR ERVL 1 554 0 24 0 0 0 chr10 111337092 111337116 -28979649 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr10 111337148 111337184 -28979581 + AT_rich Low_complexity Low_complexity 1 36 0 1062 100 0 0 chr10 111337676 111337816 -28978949 - AluSg/x SINE Alu 0 312 173 1217 76 0 0 chr10 111337816 111337960 -28978805 + AluSc SINE Alu 23 166 -143 363 291 92 41 chr10 111338153 111338349 -28978416 - L1ME3A LINE L1 -86 6084 5879 1209 195 124 13 chr10 111338461 111338759 -28978006 - MSTB LTR MaLR -82 344 14 402 265 10 10 chr10 111339710 111339808 -28976957 - MER5B DNA MER1_type -60 118 21 28 29 0 0 chr10 111340105 111340140 -28976625 + AT_rich Low_complexity Low_complexity 1 35 0 329 197 0 0 chr10 111340171 111340232 -28976533 - MSTB LTR MaLR -365 61 1 436 234 98 58 chr10 111340252 111340611 -28976154 + L1MEd LINE L1 855 1227 -4892 1496 303 48 29 chr10 111341257 111341340 -28975425 - L2 LINE L2 -133 3180 3100 500 270 40 23 chr10 111341340 111341514 -28975251 - MER5B DNA MER1_type 0 178 2 1496 303 48 29 chr10 111341514 111342260 -28974505 - L2 LINE L2 -213 3100 2328 2271 62 0 0 chr10 111343677 111343975 -28972790 - AluSc SINE Alu 0 308 11 248 240 67 0 chr10 111344266 111344341 -28972424 - MER116 DNA Mariner 0 80 1 1755 178 11 3 chr10 111344460 111344747 -28972018 - AluJo SINE Alu -23 289 1 504 266 8 0 chr10 111344759 111344883 -28971882 - FLAM_C SINE Alu -8 125 1 340 331 104 0 chr10 111345388 111345542 -28971223 + MIR3 SINE MIR 5 174 -34 3314 193 37 11 chr10 111345974 111346730 -28970035 + L1MC1 LINE L1 5552 6327 -6 22 0 0 0 chr10 111347431 111347453 -28969312 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr10 111348012 111348044 -28968721 + AT_rich Low_complexity Low_complexity 1 32 0 605 269 75 11 chr10 111348044 111348230 -28968535 - MIR SINE MIR -64 198 1 1936 197 207 92 chr10 111348596 111349521 -28967244 + LTR28 LTR ERV1 1 1020 0 31315 156 17 13 chr10 111349524 111350480 -28966285 + LTR28-int LTR ERV1 6 956 -5924 2291 97 0 3 chr10 111350480 111350778 -28965987 + AluSc SINE Alu 3 299 -10 31315 156 17 13 chr10 111350778 111356080 -28960685 + LTR28-int LTR ERV1 956 6463 -417 284 288 53 53 chr10 111357895 111358027 -28958738 - MIR SINE MIR -116 146 15 472 342 43 22 chr10 111359414 111359645 -28957120 + MIR SINE MIR 15 250 -12 1849 135 193 11 chr10 111360230 111360592 -28956173 + MSTA LTR MaLR 1 428 0 6685 33 0 0 chr10 111361245 111362080 -28954685 + L1PA3 LINE L1 5355 6189 0 4570 139 8 49 chr10 111363681 111364394 -28952371 + L1PA16 LINE L1 5299 5971 -195 2172 129 22 25 chr10 111364394 111364759 -28952006 - THE1B LTR MaLR 0 364 1 4570 139 8 49 chr10 111364759 111364928 -28951837 + L1PA16 LINE L1 5971 6145 -21 34 72 0 0 chr10 111365003 111365072 -28951693 + AT_rich Low_complexity Low_complexity 1 69 0 231 277 211 42 chr10 111366526 111366739 -28950026 + MLT1H LTR MaLR 26 274 -275 995 356 168 25 chr10 111366848 111367807 -28948958 - L2 LINE L2 -1634 1680 464 2538 94 37 0 chr10 111367807 111368158 -28948607 + THE1B LTR MaLR 1 364 0 995 356 168 25 chr10 111368158 111368575 -28948190 - L2 LINE L2 -2850 464 108 22 0 0 0 chr10 111370739 111370761 -28946004 + AT_rich Low_complexity Low_complexity 1 22 0 1776 244 29 39 chr10 111370896 111371623 -28945142 - L1MC5 LINE L1 -73 7888 7169 234 0 0 0 chr10 111371739 111371765 -28945000 + (A)n Simple_repeat Simple_repeat 1 26 0 2174 107 0 20 chr10 111372218 111372380 -28944385 - AluSc SINE Alu -17 292 128 441 0 0 0 chr10 111372380 111372429 -28944336 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 2178 62 29 0 chr10 111372429 111372705 -28944060 - AluY SINE Alu -27 284 1 2174 107 0 20 chr10 111372705 111372839 -28943926 - AluSc SINE Alu -179 130 1 281 132 40 26 chr10 111373548 111373624 -28943141 + GA-rich Low_complexity Low_complexity 3 79 0 1058 70 35 6 chr10 111373629 111373801 -28942964 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 272 229 0 62 chr10 111373836 111373932 -28942833 - L2 LINE L2 -298 2974 2885 410 321 0 0 chr10 111374242 111374376 -28942389 + MER94 DNA DNA 1 134 0 250 391 93 0 chr10 111374424 111374575 -28942190 + L2 LINE L2 3104 3268 -4 2005 151 141 5 chr10 111375483 111375860 -28940905 + MSTA LTR MaLR 1 428 0 1005 174 174 67 chr10 111375945 111376272 -28940493 - MER93b LTR ERV1 0 373 12 2243 97 7 17 chr10 111376273 111376573 -28940192 - AluY SINE Alu -14 297 1 300 335 84 26 chr10 111377694 111377885 -28938880 + MIR3 SINE MIR 1 202 -6 259 172 108 65 chr10 111378918 111379011 -28937754 + Charlie7 DNA MER1_type 43 139 -2473 587 164 71 7 chr10 111379129 111379269 -28937496 + L1MB1 LINE L1 6033 6181 -8 280 86 0 0 chr10 111379526 111379561 -28937204 + U2 snRNA snRNA 1 35 -153 420 235 60 13 chr10 111379652 111379801 -28936964 + Charlie7 DNA MER1_type 319 474 -2138 21 0 0 0 chr10 111379895 111379916 -28936849 + AT_rich Low_complexity Low_complexity 1 21 0 1737 142 55 0 chr10 111379917 111380192 -28936573 + AluSx SINE Alu 21 310 -2 447 264 108 41 chr10 111380233 111380548 -28936217 + Charlie7 DNA MER1_type 1805 2140 -472 293 235 34 84 chr10 111380560 111380648 -28936117 + L2 LINE L2 3199 3281 -32 2201 179 7 7 chr10 111380648 111381051 -28935714 + MER57A LTR ERV1 1 403 0 293 235 34 84 chr10 111381051 111381081 -28935684 + L2 LINE L2 3281 3311 -2 615 197 51 62 chr10 111381100 111381278 -28935487 - MER53 DNA DNA -10 179 4 366 62 0 0 chr10 111381330 111381378 -28935387 - MSTA LTR MaLR -378 50 3 247 352 0 0 chr10 111382219 111382307 -28934458 + MER3 DNA MER1_type 7 94 -115 2361 76 0 20 chr10 111382340 111382642 -28934123 - AluY SINE Alu -15 296 1 22 80 0 0 chr10 111382653 111382703 -28934062 + AT_rich Low_complexity Low_complexity 1 50 0 231 250 15 0 chr10 111382703 111382771 -28933994 - MER3 DNA MER1_type -104 105 37 21 36 0 0 chr10 111383525 111383553 -28933212 + AT_rich Low_complexity Low_complexity 1 28 0 197 347 31 10 chr10 111383958 111384056 -28932709 - L2 LINE L2 -1 3271 3172 * 218 349 85 0 chr10 111384045 111384174 -28932591 + MIR3 SINE MIR 63 202 -6 26 50 0 0 chr10 111385659 111385699 -28931066 + AT_rich Low_complexity Low_complexity 1 40 0 339 138 62 0 chr10 111386199 111386279 -28930486 - L1MA2 LINE L1 0 6304 6220 225 257 67 114 chr10 111388211 111388421 -28928344 + MIR SINE MIR 48 247 -15 596 290 50 38 chr10 111390537 111390775 -28925990 - MIR SINE MIR -18 244 4 2156 142 79 43 chr10 111392157 111392574 -28924191 + MSTB1 LTR MaLR 1 432 0 1059 205 65 79 chr10 111392639 111392980 -28923785 + MER58B DNA MER1_type 3 338 -3 342 0 0 0 chr10 111393756 111393794 -28922971 + (CAT)n Simple_repeat Simple_repeat 2 39 0 439 360 45 41 chr10 111393842 111394331 -28922434 - L2 LINE L2 -456 2858 2368 222 250 0 0 chr10 111397587 111397659 -28919106 + A-rich Low_complexity Low_complexity 1 72 0 515 343 54 5 chr10 111397990 111398194 -28918571 + MIR SINE MIR 5 218 -44 4135 65 18 11 chr10 111399614 111400170 -28916595 - L1PA7 LINE L1 0 6154 5595 1798 74 8 0 chr10 111400170 111400413 -28916352 + L1PA7 LINE L1 5357 5601 -553 302 265 40 60 chr10 111400460 111400611 -28916154 + L1ME3 LINE L1 4373 4520 -1626 1263 142 51 16 chr10 111400614 111400868 -28915897 - MER6 DNA MER2_type -1 864 602 1930 231 45 7 chr10 111400868 111401309 -28915456 - MER6 DNA MER2_type -406 459 2 332 290 101 24 chr10 111401420 111401440 -28915325 + L1ME3 LINE L1 4637 4654 -1492 411 21 0 0 chr10 111401440 111401488 -28915277 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 332 290 101 24 chr10 111401488 111401653 -28915112 + L1ME3 LINE L1 4654 4836 -1310 270 239 124 0 chr10 111401675 111401788 -28914977 + MER52A LTR ERV1 1 127 -1628 4481 183 70 9 chr10 111401855 111402787 -28913978 + MER52A LTR ERV1 649 1755 0 460 310 115 20 chr10 111403171 111403666 -28913099 + L1ME3 LINE L1 5280 5837 -323 1127 304 139 2 chr10 111404275 111404742 -28912023 + L2 LINE L2 2228 2758 -556 539 335 77 31 chr10 111404794 111405054 -28911711 + LTR16A LTR ERVL 57 328 -122 1099 174 100 25 chr10 111406779 111407060 -28909705 - MER5C DNA MER1_type -21 303 2 3152 80 2 5 chr10 111407152 111407590 -28909175 - L1PA10 LINE L1 -1 6167 5731 1969 144 31 36 chr10 111407592 111407952 -28908813 - THE1B LTR MaLR 0 364 7 10743 110 24 5 chr10 111407961 111409510 -28907255 - THE1B-int LTR MaLR -1 1579 2 1934 155 51 25 chr10 111409511 111409866 -28906899 - THE1B LTR MaLR 0 364 1 4678 120 12 4 chr10 111409866 111410982 -28905783 - L1PA10 LINE L1 -435 5733 4607 400 192 64 0 chr10 111410986 111411064 -28905701 - MIR SINE MIR -73 189 107 297 336 37 0 chr10 111411116 111411223 -28905542 + L2 LINE L2 2277 2387 -927 919 253 83 32 chr10 111411793 111412070 -28904695 + MER31B-int LTR ERV1 4565 4861 -75 1684 210 0 0 chr10 111412070 111412379 -28904386 + AluJb SINE Alu 3 311 -1 919 253 83 32 chr10 111412379 111412413 -28904352 + MER31B-int LTR ERV1 4861 4892 -44 1278 183 25 36 chr10 111412417 111412691 -28904074 + MER31B LTR ERV1 6 276 -190 465 260 192 10 chr10 111412790 111412998 -28903767 + MIR SINE MIR 17 262 0 27 29 0 0 chr10 111414911 111414945 -28901820 + AT_rich Low_complexity Low_complexity 1 34 0 2410 91 0 0 chr10 111415071 111415380 -28901385 + AluSc SINE Alu 1 309 0 204 310 70 0 chr10 111416059 111416130 -28900635 - L2 LINE L2 -1 3271 3196 203 373 25 34 chr10 111416338 111416456 -28900309 + L2 LINE L2 2727 2843 -471 1959 134 41 0 chr10 111416574 111416865 -28899900 - AluSx SINE Alu -9 303 1 240 35 0 0 chr10 111416898 111416927 -28899838 + (TG)n Simple_repeat Simple_repeat 2 30 0 235 161 36 0 chr10 111416954 111417010 -28899755 + (TA)n Simple_repeat Simple_repeat 2 59 0 1942 213 132 52 chr10 111417457 111418222 -28898543 + LTR1B LTR ERV1 1 826 0 1526 201 102 91 chr10 111418222 111418761 -28898004 - MLT2B3 LTR ERVL -6 548 1 227 368 11 0 chr10 111418767 111418862 -28897903 - L2 LINE L2 -452 2862 2767 288 311 33 66 chr10 111418874 111419025 -28897740 + L2 LINE L2 2903 3048 -224 198 0 0 0 chr10 111419313 111419335 -28897430 + (T)n Simple_repeat Simple_repeat 1 22 0 207 0 0 0 chr10 111419486 111419509 -28897256 + (CA)n Simple_repeat Simple_repeat 2 24 0 1778 141 52 3 chr10 111419542 111419832 -28896933 + AluSx SINE Alu 3 306 -6 765 311 18 0 chr10 111421208 111421427 -28895338 - MER58A DNA MER1_type 0 224 2 24 53 0 0 chr10 111421558 111421596 -28895169 + AT_rich Low_complexity Low_complexity 1 38 0 41 21 0 0 chr10 111421634 111421682 -28895083 + AT_rich Low_complexity Low_complexity 1 48 0 255 203 0 0 chr10 111421733 111421792 -28894973 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr10 111421869 111421904 -28894861 + (CA)n Simple_repeat Simple_repeat 2 36 0 248 322 70 73 chr10 111422044 111422358 -28894407 + L2 LINE L2 2507 2819 -495 207 293 158 49 chr10 111422410 111422574 -28894191 + L2 LINE L2 3111 3292 -21 210 71 0 0 chr10 111422587 111422615 -28894150 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 3349 92 2 0 chr10 111423498 111423919 -28892846 + LTR46 LTR ERV1 1 425 -35 228 35 0 0 chr10 111423919 111423948 -28892817 + (TG)n Simple_repeat Simple_repeat 2 30 0 3349 92 2 0 chr10 111423948 111423985 -28892780 + LTR46 LTR ERV1 425 460 0 350 297 62 39 chr10 111424198 111424326 -28892439 - MIR3 SINE MIR -40 168 38 2154 109 0 3 chr10 111425247 111425529 -28891236 + AluSg SINE Alu 1 283 -27 428 0 19 0 chr10 111425529 111425581 -28891184 + (CA)n Simple_repeat Simple_repeat 2 54 0 574 287 69 20 chr10 111426949 111427151 -28889614 - MIR SINE MIR -4 258 47 501 316 34 57 chr10 111427631 111427894 -28888871 + MIR SINE MIR 2 258 -4 282 290 21 11 chr10 111428119 111428212 -28888553 + CT-rich Low_complexity Low_complexity 1 94 0 215 233 17 0 chr10 111428316 111428376 -28888389 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 229 302 40 34 chr10 111428528 111428677 -28888088 + L1ME4a LINE L1 5961 6110 -11 426 312 72 7 chr10 111428830 111428968 -28887797 + MIR SINE MIR 88 234 -28 207 259 0 19 chr10 111429756 111429810 -28886955 + L2 LINE L2 3216 3268 -4 28 29 0 0 chr10 111429813 111429848 -28886917 + AT_rich Low_complexity Low_complexity 1 35 0 625 267 59 84 chr10 111430196 111430595 -28886170 - MLT1G LTR MaLR -8 578 203 588 167 25 0 chr10 111430595 111430715 -28886050 - L1MA9 LINE L1 0 6312 6190 625 267 59 84 chr10 111430715 111430892 -28885873 - MLT1G LTR MaLR -383 203 23 369 164 0 45 chr10 111431532 111431553 -28885212 - MIR3 SINE MIR -35 173 153 829 263 52 0 chr10 111431553 111431766 -28884999 - MER58A DNA MER1_type 0 224 1 369 164 0 45 chr10 111431766 111431811 -28884954 - MIR3 SINE MIR -55 153 110 22 0 0 0 chr10 111433367 111433389 -28883376 + AT_rich Low_complexity Low_complexity 1 22 0 2024 99 44 10 chr10 111434759 111435052 -28881713 + AluSc SINE Alu 1 303 -6 473 314 80 9 chr10 111436497 111436723 -28880042 - MIR SINE MIR -6 256 15 1727 207 89 37 chr10 111436741 111437259 -28879506 + LTR55 LTR ERV 3 547 -1 232 374 76 0 chr10 111438054 111438185 -28878580 + MER20B DNA MER1_type 64 204 -579 567 223 38 55 chr10 111438463 111438701 -28878064 + MER20B DNA MER1_type 549 782 -1 243 314 57 36 chr10 111438730 111438870 -28877895 + MIR SINE MIR 68 210 -52 3193 176 33 56 chr10 111438939 111439702 -28877063 + L1MC3 LINE L1 5286 6030 -1755 213 326 32 21 chr10 111440558 111440653 -28876112 - MIR SINE MIR -160 102 7 646 246 9 76 chr10 111440685 111440909 -28875856 + MIR SINE MIR 44 252 -10 21 36 0 0 chr10 111440988 111441016 -28875749 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr10 111441450 111441473 -28875292 + (TTA)n Simple_repeat Simple_repeat 1 23 0 289 191 78 78 chr10 111442200 111442315 -28874450 - MIR SINE MIR -70 192 78 1177 287 145 32 chr10 111442498 111443003 -28873762 - MLT1E LTR MaLR -2 591 30 239 276 86 0 chr10 111443079 111443195 -28873570 + Tigger8 DNA MER2_type 215 340 -326 515 151 0 32 chr10 111443476 111443569 -28873196 + AluJb SINE Alu 39 128 -184 1717 157 23 30 chr10 111443594 111443899 -28872866 + AluJb SINE Alu 1 303 -9 239 304 139 19 chr10 111443964 111444122 -28872643 + L2 LINE L2 2708 2884 -430 229 226 16 48 chr10 111444449 111444511 -28872254 + L2 LINE L2 3213 3272 0 956 182 12 0 chr10 111444616 111444786 -28871979 - FRAM SINE Alu 0 176 5 1725 186 15 30 chr10 111445396 111445734 -28871031 - MER47B DNA MER2_type -1 417 85 1273 212 18 11 chr10 111445735 111446009 -28870756 + AluJo SINE Alu 21 296 -16 536 186 10 10 chr10 111446009 111446111 -28870654 - MER47B DNA MER2_type -316 102 1 1680 216 110 63 chr10 111448509 111449036 -28867729 - MLT1E LTR MaLR 0 593 42 963 333 34 39 chr10 111449184 111449328 -28867437 + MER115 DNA AcHobo 1 144 -549 889 222 165 42 chr10 111449328 111449472 -28867293 + MLT1A2 LTR MaLR 1 126 -248 309 51 0 0 chr10 111449472 111449511 -28867254 + (TG)n Simple_repeat Simple_repeat 2 40 0 889 222 165 42 chr10 111449511 111449562 -28867203 + MLT1A2 LTR MaLR 126 169 -205 2476 52 0 10 chr10 111449562 111449869 -28866896 - AluY SINE Alu -7 304 1 889 222 165 42 chr10 111449869 111450005 -28866760 + MLT1A2 LTR MaLR 169 374 0 963 333 34 39 chr10 111450005 111450244 -28866521 + MER115 DNA AcHobo 144 382 -311 3711 113 26 3 chr10 111452028 111452595 -28864170 + LTR19B LTR ERV1 1 580 0 296 376 68 0 chr10 111453099 111453216 -28863549 - L2 LINE L2 -1 3312 3188 1645 178 58 0 chr10 111453325 111453600 -28863165 + AluSx SINE Alu 1 291 -21 2138 142 8 11 chr10 111453836 111454217 -28862548 - L1MB3 LINE L1 -7 6176 5797 22 56 0 0 chr10 111455065 111455101 -28861664 + AT_rich Low_complexity Low_complexity 1 36 0 558 260 39 48 chr10 111455149 111455380 -28861385 + MER106A DNA MER1_type 8 236 0 435 38 0 0 chr10 111456553 111456606 -28860159 + (CA)n Simple_repeat Simple_repeat 2 54 0 515 86 7 197 chr10 111456950 111457102 -28859663 + MER4-int LTR ERV1 627 749 -4266 * 1729 93 53 37 chr10 111457100 111457400 -28859365 + MER4-int LTR ERV1 1771 2075 -4523 2691 91 123 6 chr10 111457606 111458153 -28858612 + MER4-int LTR ERV1 1885 2495 -4103 1548 135 57 4 chr10 111458153 111458397 -28858368 - LTR8 LTR ERV1 -434 257 1 14775 122 64 29 chr10 111458397 111461471 -28855294 + MER4-int LTR ERV1 1862 6541 -57 319 274 59 0 chr10 111461471 111461573 -28855192 - MLT1G1 LTR MaLR -487 108 1 274 272 37 37 chr10 111461611 111461747 -28855018 - MLT1J1 LTR MaLR -19 427 292 1927 95 0 69 chr10 111462179 111462514 -28854251 - AluY SINE Alu 0 314 1 701 321 148 28 chr10 111462805 111463198 -28853567 + L2 LINE L2 2843 3282 -31 2110 226 42 60 chr10 111463201 111463797 -28852968 - MLT1E LTR MaLR -2 591 7 1930 119 7 0 chr10 111463818 111464132 -28852633 - AluSx SINE Alu 0 320 5 23 0 0 0 chr10 111464332 111464355 -28852410 + AT_rich Low_complexity Low_complexity 1 23 0 191 299 15 30 chr10 111464956 111465023 -28851742 + MIR SINE MIR 83 148 -114 331 291 24 24 chr10 111465084 111465211 -28851554 - MER5B DNA MER1_type -31 147 21 1238 160 0 0 chr10 111465423 111465611 -28851154 - AluJb SINE Alu -24 288 101 314 214 2 2 chr10 111465611 111465675 -28851090 - AluS SINE Alu -245 58 2 210 71 0 0 chr10 111466110 111466138 -28850627 + (ATG)n Simple_repeat Simple_repeat 2 29 0 1457 239 65 41 chr10 111466250 111466743 -28850022 + MLT1D LTR MaLR 1 626 0 845 211 62 14 chr10 111467427 111467635 -28849130 + MER20 DNA MER1_type 1 218 -1 2125 119 0 3 chr10 111468012 111468305 -28848460 + AluSg SINE Alu 3 294 -16 2118 117 0 0 chr10 111468562 111468876 -28847889 + AluSg SINE Alu 1 314 0 755 355 122 23 chr10 111468896 111469601 -28847164 + L3 LINE CR1 22 796 -781 212 355 153 0 chr10 111469605 111469729 -28847036 - MIR3 SINE MIR -3 205 63 28 0 0 0 chr10 111470513 111470541 -28846224 + AT_rich Low_complexity Low_complexity 1 28 0 293 272 120 40 chr10 111470607 111470732 -28846033 - L2 LINE L2 -5 3308 3174 1773 183 33 3 chr10 111470958 111471292 -28845473 - MER2 DNA MER2_type 0 344 1 2222 72 0 0 chr10 111472007 111472285 -28844480 + AluY SINE Alu 34 311 0 365 115 0 0 chr10 111474027 111474079 -28842686 + Alu SINE Alu 1 52 -248 1722 165 3 32 chr10 111474079 111474394 -28842371 + AluSx SINE Alu 4 309 -3 627 295 109 55 chr10 111474425 111474728 -28842037 + LTR33 LTR ERVL 47 383 -138 2799 203 37 25 chr10 111474728 111475408 -28841357 + MER76 LTR ERV 1 688 0 627 295 109 55 chr10 111475408 111475555 -28841210 + LTR33 LTR ERVL 383 521 0 1345 197 176 53 chr10 111475643 111476059 -28840706 - MLT1C LTR MaLR 0 467 1 884 290 106 31 chr10 111476130 111476489 -28840276 + MLT1K LTR MaLR 67 452 -136 1029 179 5 41 chr10 111476641 111476836 -28839929 - MER5A DNA MER1_type 0 189 2 31 44 0 0 chr10 111476836 111476881 -28839884 + AT_rich Low_complexity Low_complexity 1 45 0 246 359 83 21 chr10 111477603 111477748 -28839017 + MIR3 SINE MIR 30 183 -25 586 278 40 12 chr10 111477866 111478039 -28838726 + MIR SINE MIR 33 210 -52 260 346 30 38 chr10 111479467 111479600 -28837165 + MIR SINE MIR 18 149 -113 351 0 0 0 chr10 111480293 111480332 -28836433 + (CA)n Simple_repeat Simple_repeat 2 40 0 613 358 42 47 chr10 111480520 111480550 -28836215 - MLT1K LTR MaLR -220 368 339 3435 150 0 0 chr10 111480550 111481077 -28835688 + MER1A DNA MER1_type 1 527 0 613 358 42 47 chr10 111481077 111481406 -28835359 - MLT1K LTR MaLR -249 339 11 2049 138 3 0 chr10 111481743 111482040 -28834725 + AluSq SINE Alu 1 298 -15 184 260 0 60 chr10 111482412 111482462 -28834303 - L2 LINE L2 -11 3302 3256 1385 241 54 8 chr10 111482640 111482992 -28833773 + MLT1A2 LTR MaLR 7 374 0 569 325 86 63 chr10 111483152 111483642 -28833123 - L2 LINE L2 -463 2851 2351 606 65 22 54 chr10 111483643 111483735 -28833030 - L1MA2 LINE L1 -518 5786 5698 * 2071 90 99 160 chr10 111483712 111484256 -28832509 + L1MA2 LINE L1 5794 6304 0 1466 305 67 70 chr10 111484269 111485330 -28831435 - L2 LINE L2 -963 2351 1294 353 93 0 0 chr10 111486344 111486398 -28830367 + L1PB1 LINE L1 6097 6150 -1 222 323 39 47 chr10 111487246 111487373 -28829392 + MIR3 SINE MIR 71 196 -12 237 311 151 42 chr10 111487655 111487774 -28828991 - L2 LINE L2 0 3272 3141 1383 321 59 17 chr10 111487881 111488593 -28828172 - L2 LINE L2 -193 3120 2384 1345 121 32 68 chr10 111488606 111488854 -28827911 + L1PB3 LINE L1 5907 6145 -9 588 313 85 9 chr10 111488899 111489110 -28827655 + MIR SINE MIR 29 255 -7 391 363 17 11 chr10 111489175 111489354 -28827411 - MIR SINE MIR -68 194 15 226 275 150 0 chr10 111489650 111489730 -28827035 + MIR SINE MIR 161 252 -10 267 237 0 0 chr10 111489866 111489925 -28826840 + CT-rich Low_complexity Low_complexity 2 60 0 1623 163 20 27 chr10 111490309 111490604 -28826161 - AluJo SINE Alu -14 298 6 265 158 0 0 chr10 111491496 111491534 -28825231 + MLT1D LTR MaLR 4 41 -464 747 126 8 8 chr10 111491534 111491661 -28825104 - AluSg/x SINE Alu 0 312 186 316 315 171 23 chr10 111493102 111493318 -28823447 + MIR SINE MIR 9 256 -6 342 300 46 58 chr10 111494379 111494619 -28822146 - L1M4 LINE L1 -2695 3451 3215 240 216 128 112 chr10 111494746 111494871 -28821894 - MIR SINE MIR -64 144 18 392 0 21 0 chr10 111496652 111496700 -28820065 + (TG)n Simple_repeat Simple_repeat 2 50 0 835 113 16 54 chr10 111496700 111496874 -28819891 - AluSq SINE Alu -27 286 118 238 316 4 31 chr10 111497092 111497251 -28819514 + CT-rich Low_complexity Low_complexity 1 154 0 908 149 0 118 chr10 111497761 111498107 -28818658 + AluSx SINE Alu 1 308 0 283 249 105 65 chr10 111498379 111498608 -28818157 + L1MC5 LINE L1 7260 7497 -464 2191 122 0 0 chr10 111498641 111498937 -28817828 + AluSc SINE Alu 1 296 -13 260 81 0 27 chr10 111498953 111498990 -28817775 + L1MC/D LINE L1 5492 5527 -2258 1435 123 0 0 chr10 111499216 111499411 -28817354 - AluSx SINE Alu -117 195 1 2086 213 25 53 chr10 111499412 111499901 -28816864 + MLT1D LTR MaLR 31 505 0 411 21 0 0 chr10 111501792 111501840 -28814925 + (TG)n Simple_repeat Simple_repeat 2 49 0 270 323 23 8 chr10 111501847 111501977 -28814788 - MLT1L LTR MaLR -2 613 482 1108 157 39 5 chr10 111502390 111502664 -28814101 + MER1B DNA MER1_type 15 339 0 21 36 0 0 chr10 111502727 111502755 -28814010 + AT_rich Low_complexity Low_complexity 1 28 0 39 74 0 0 chr10 111502867 111502948 -28813817 + AT_rich Low_complexity Low_complexity 1 81 0 216 0 0 0 chr10 111503059 111503083 -28813682 + (TA)n Simple_repeat Simple_repeat 2 25 0 461 329 86 45 chr10 111503112 111503425 -28813340 - L1MC/D LINE L1 -2155 5653 5328 1136 119 0 0 chr10 111503617 111503785 -28812980 + L1PB1 LINE L1 13 180 -6683 12711 136 45 17 chr10 111503827 111505917 -28810848 + L1PB1 LINE L1 726 2890 -3972 1986 125 21 0 chr10 111505917 111506204 -28810561 + AluSx SINE Alu 13 305 -7 12711 136 45 17 chr10 111506204 111506354 -28810411 + L1PB1 LINE L1 2890 3034 -3828 1851 155 117 8 chr10 111506395 111506762 -28810003 - MSTA LTR MaLR -21 407 1 2333 164 2 35 chr10 111506762 111507243 -28809522 + L1PB1 LINE L1 3031 3495 -3367 5325 154 33 11 chr10 111507261 111508383 -28808382 + L1PB1 LINE L1 5344 6511 -356 308 43 0 21 chr10 111508383 111508430 -28808335 + (TA)n Simple_repeat Simple_repeat 2 47 0 5325 154 33 11 chr10 111508430 111508795 -28807970 + L1PB1 LINE L1 6511 6867 0 329 299 22 66 chr10 111509001 111509138 -28807627 - L2 LINE L2 -15 3257 3127 1504 128 55 8 chr10 111509165 111509422 -28807343 + L1MA2 LINE L1 6016 6284 -20 9121 43 11 3 chr10 111510031 111511955 -28804810 - L1PA4 LINE L1 -2 6153 4221 291 307 131 26 chr10 111513182 111513335 -28803430 - MIR3 SINE MIR -20 188 20 261 268 0 0 chr10 111513688 111513770 -28802995 + (CGTA)n Simple_repeat Simple_repeat 2 83 0 960 292 123 8 chr10 111514446 111515018 -28801747 - L2 LINE L2 -111 3202 2561 265 136 34 0 chr10 111515129 111515188 -28801577 + L1MA7 LINE L1 6229 6289 -2 2195 214 38 8 chr10 111515907 111516378 -28800387 - MLT1D LTR MaLR 0 505 21 397 253 0 26 chr10 111516725 111516879 -28799886 + (TA)n Simple_repeat Simple_repeat 1 150 0 1655 222 41 13 chr10 111517051 111517438 -28799327 + MLT2D LTR ERVL 3 400 -14 408 286 84 76 chr10 111517681 111518038 -28798727 + L1ME4a LINE L1 5461 5820 -301 234 276 24 47 chr10 111518113 111518240 -28798525 + L1ME4a LINE L1 5939 6062 -59 4065 240 51 67 chr10 111518679 111520265 -28796500 + L1M4c LINE L1 1044 2652 -3730 2392 102 0 0 chr10 111520265 111520578 -28796187 + AluSq SINE Alu 1 313 0 4065 240 51 67 chr10 111520578 111522115 -28794650 + L1M4c LINE L1 2652 4212 -2170 1139 149 0 11 chr10 111522133 111522307 -28794458 + AluSg/x SINE Alu 119 290 -22 2540 216 32 65 chr10 111522333 111523173 -28793592 + L1M4c LINE L1 4251 5062 -1320 267 31 0 0 chr10 111523174 111523206 -28793559 + (TG)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr10 111523281 111523313 -28793452 + AT_rich Low_complexity Low_complexity 1 32 0 1689 243 19 95 chr10 111524317 111524959 -28791806 - MLT1E LTR MaLR 0 593 1 673 254 12 6 chr10 111526297 111526470 -28790295 + MER5B DNA MER1_type 1 174 -4 205 228 18 18 chr10 111527438 111527495 -28789270 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 222 244 0 0 chr10 111527640 111527681 -28789084 + MIR SINE MIR 67 107 -101 415 151 21 21 chr10 111528778 111528871 -28787894 - L1MC5 LINE L1 -49 7912 7820 414 250 17 10 chr10 111529077 111529217 -28787548 - LTR43 LTR ERV1 -207 472 180 1982 109 0 41 chr10 111529304 111529623 -28787142 + AluSx SINE Alu 1 307 0 689 306 56 22 chr10 111529789 111530109 -28786656 - HUERS-P3 LTR ERV1 -44 6632 6302 352 293 107 33 chr10 111530258 111530473 -28786292 - HUERS-P3 LTR ERV1 -5091 3828 3598 514 153 10 0 chr10 111530908 111531006 -28785759 - L1MC3 LINE L1 -108 7677 7579 * 6336 189 41 52 chr10 111531005 111532536 -28784229 - L1MC3 LINE L1 -425 7360 5846 5538 112 14 41 chr10 111532536 111533504 -28783261 + L1MA1 LINE L1 5220 6161 -141 253 179 36 0 chr10 111533471 111533527 -28783238 + L1MC3 LINE L1 6190 6247 -1538 * 1147 92 46 6 chr10 111533544 111533718 -28783047 + L1MA2 LINE L1 6116 6296 -8 37 0 0 0 chr10 111533722 111533759 -28783006 + AT_rich Low_complexity Low_complexity 1 37 0 1327 180 50 7 chr10 111533814 111534097 -28782668 - L1MA8 LINE L1 -1927 5858 5564 1803 161 81 26 chr10 111534101 111534387 -28782378 + L1MA8 LINE L1 5835 6160 -131 2259 188 26 2 chr10 111534387 111534803 -28781962 + MSTB LTR MaLR 1 426 0 1803 161 81 26 chr10 111534803 111534941 -28781824 + L1MA8 LINE L1 6160 6289 -2 336 133 0 0 chr10 111534944 111535004 -28781761 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 239 102 0 41 chr10 111534994 111535043 -28781722 + (GGGGA)n Simple_repeat Simple_repeat 3 49 0 * 312 79 0 0 chr10 111535233 111535271 -28781494 - L1MC3 LINE L1 -2256 5529 5492 2209 119 0 0 chr10 111535287 111535582 -28781183 - AluSc SINE Alu -14 295 1 283 249 105 65 chr10 111535615 111535844 -28780921 - L1MC5 LINE L1 -464 7497 7260 1989 145 3 0 chr10 111536116 111536423 -28780342 - AluSx SINE Alu 0 308 1 222 310 60 0 chr10 111536781 111536881 -28779884 + MIR SINE MIR 157 262 0 273 268 80 0 chr10 111536966 111537078 -28779687 - L1ME4a LINE L1 -24 6097 5977 2121 83 4 4 chr10 111537350 111537628 -28779137 + AluSc SINE Alu 28 305 -4 4053 169 78 16 chr10 111537694 111538506 -28778259 - MER6 DNA MER2_type -3 862 1 323 410 52 19 chr10 111538991 111539411 -28777354 - L3 LINE CR1 -1105 472 39 1122 255 82 48 chr10 111539828 111540240 -28776525 + MLT1C LTR MaLR 36 461 -6 27 0 0 0 chr10 111540270 111540297 -28776468 + AT_rich Low_complexity Low_complexity 1 27 0 710 268 182 43 chr10 111541203 111541643 -28775122 - MLT1J LTR MaLR -8 503 3 275 146 36 0 chr10 111541992 111542047 -28774718 + L1M4 LINE L1 2311 2367 -3779 * 1606 241 42 54 chr10 111542038 111542616 -28774149 - L1M4 LINE L1 -3071 3075 2505 2541 222 39 24 chr10 111542777 111543478 -28773287 + L1ME1 LINE L1 5271 5978 -188 30 27 0 0 chr10 111543569 111543606 -28773159 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr10 111543768 111543810 -28772955 + AT_rich Low_complexity Low_complexity 1 42 0 220 391 84 59 chr10 111544920 111545311 -28771454 + L2 LINE L2 2872 3272 0 684 93 0 0 chr10 111545984 111546081 -28770684 + (TA)n Simple_repeat Simple_repeat 2 98 0 9851 199 27 16 chr10 111546736 111548730 -28768035 - L1PB4 LINE L1 -4 6152 4181 7284 50 0 0 chr10 111548730 111549736 -28767029 + L1PA5 LINE L1 5147 6152 -2 9851 199 27 16 chr10 111549736 111550586 -28766179 - L1PB4 LINE L1 -1975 4181 3274 2360 55 41 0 chr10 111550586 111550879 -28765886 - AluY SINE Alu -6 305 1 9851 199 27 16 chr10 111550879 111551352 -28765413 - L1PB4 LINE L1 -2882 3274 2808 2270 103 3 7 chr10 111551533 111551834 -28764931 - AluSx SINE Alu -6 306 7 264 350 67 47 chr10 111552186 111552413 -28764352 + L2 LINE L2 2700 2935 -378 2220 114 0 19 chr10 111552413 111552729 -28764036 - AluSx SINE Alu -2 310 1 264 350 67 47 chr10 111552729 111552835 -28763930 + L2 LINE L2 2935 3037 -276 224 223 339 0 chr10 111552990 111553102 -28763663 - L2 LINE L2 -1 3312 3163 3516 199 6 3 chr10 111553116 111553760 -28763005 + MER82 DNA MER2_type 8 653 0 1226 281 59 108 chr10 111553782 111554842 -28761923 - L2 LINE L2 -175 3138 2139 301 115 0 51 chr10 111554866 111554916 -28761849 + Alu SINE Alu 1 40 -262 1920 155 3 0 chr10 111554916 111555213 -28761552 + AluSx SINE Alu 5 302 -10 301 115 0 51 chr10 111555213 111555225 -28761540 + Alu SINE Alu 40 51 -251 1985 131 6 16 chr10 111555941 111556253 -28760512 + AluSp SINE Alu 1 309 -4 35660 99 19 8 chr10 111556857 111562972 -28753793 + L1PA6 LINE L1 11 6190 0 359 300 19 19 chr10 111563789 111563926 -28752839 + MER5B DNA MER1_type 33 180 -9 335 367 50 81 chr10 111564154 111564451 -28752314 + L2 LINE L2 2976 3263 -9 198 161 16 32 chr10 111564948 111565010 -28751755 + (TA)n Simple_repeat Simple_repeat 2 62 0 225 238 60 12 chr10 111566064 111566148 -28750617 - MIR SINE MIR 0 262 175 456 265 29 15 chr10 111566598 111566734 -28750031 - MIR SINE MIR -48 214 77 295 247 0 26 chr10 111567110 111567187 -28749578 + CT-rich Low_complexity Low_complexity 2 76 0 2261 106 3 3 chr10 111567689 111568000 -28748765 + AluSx SINE Alu 1 311 -1 443 247 134 65 chr10 111568029 111568068 -28748697 - MIR SINE MIR -15 247 212 1854 227 37 9 chr10 111568068 111568522 -28748243 - MLT1C LTR MaLR 0 467 1 443 247 134 65 chr10 111568522 111568713 -28748052 - MIR SINE MIR -50 212 1 3436 131 9 21 chr10 111568740 111569273 -28747492 + MER1A DNA MER1_type 1 527 0 221 318 22 116 chr10 111569751 111570018 -28746747 + L2 LINE L2 2946 3187 -85 2100 121 3 0 chr10 111570492 111570815 -28745950 - AluSq SINE Alu 0 324 1 273 282 87 0 chr10 111572005 111572108 -28744657 - MIR SINE MIR -16 246 135 34 0 0 0 chr10 111572971 111573005 -28743760 + AT_rich Low_complexity Low_complexity 1 34 0 1932 100 41 4 chr10 111573425 111573609 -28743156 - AluSc SINE Alu 0 315 115 210 37 0 0 chr10 111573609 111573636 -28743129 + (TG)n Simple_repeat Simple_repeat 2 28 0 1932 100 41 4 chr10 111573636 111573756 -28743009 - AluSc SINE Alu -200 115 1 396 0 0 0 chr10 111573957 111574001 -28742764 + (CA)n Simple_repeat Simple_repeat 2 45 0 342 0 0 0 chr10 111574256 111574294 -28742471 + (GA)n Simple_repeat Simple_repeat 2 39 0 360 0 0 0 chr10 111574296 111574336 -28742429 + (TG)n Simple_repeat Simple_repeat 1 40 0 429 290 88 38 chr10 111575189 111575334 -28741431 - MLT1L LTR MaLR -4 611 475 2192 166 86 48 chr10 111575334 111575588 -28741177 - MLT2B1 LTR ERVL 0 520 277 2200 117 3 0 chr10 111575588 111575888 -28740877 - AluSx SINE Alu -11 301 1 2192 166 86 48 chr10 111575888 111576134 -28740631 - MLT2B1 LTR ERVL -243 277 1 429 290 88 38 chr10 111576134 111576406 -28740359 - MLT1L LTR MaLR -140 475 150 204 0 54 27 chr10 111576613 111576650 -28740115 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 809 150 0 45 chr10 111577389 111577522 -28739243 + FLAM_C SINE Alu 1 127 -16 456 286 37 0 chr10 111578612 111578737 -28738028 + MIR3 SINE MIR 79 207 -1 320 174 82 41 chr10 111578963 111579061 -28737704 - MIR SINE MIR -48 214 113 26 30 0 0 chr10 111579391 111579424 -28737341 + AT_rich Low_complexity Low_complexity 1 33 0 25 65 0 0 chr10 111579508 111579554 -28737211 + AT_rich Low_complexity Low_complexity 1 46 0 1306 194 0 71 chr10 111579794 111580103 -28736662 - AluJo SINE Alu -23 289 3 1327 224 37 43 chr10 111580131 111580483 -28736282 + MSTD LTR MaLR 3 352 -44 1221 214 135 88 chr10 111580794 111581236 -28735529 + MLT1D LTR MaLR 6 505 0 24 106 0 0 chr10 111581834 111581928 -28734837 + AT_rich Low_complexity Low_complexity 1 94 0 486 109 67 6 chr10 111581931 111582096 -28734669 + (TA)n Simple_repeat Simple_repeat 1 175 0 40 0 0 0 chr10 111582102 111582142 -28734623 + AT_rich Low_complexity Low_complexity 1 40 0 1393 223 77 94 chr10 111582389 111582688 -28734077 + MLT1E2 LTR MaLR 1 304 -322 4451 103 9 5 chr10 111582688 111583320 -28733445 - MER41B LTR ERV1 0 635 1 1393 223 77 94 chr10 111583320 111583372 -28733393 + MLT1E2 LTR MaLR 304 355 -271 2026 123 56 36 chr10 111583372 111583729 -28733036 - THE1B LTR MaLR 0 364 1 1393 223 77 94 chr10 111583729 111584007 -28732758 + MLT1E2 LTR MaLR 355 614 -12 1594 182 15 12 chr10 111584168 111584669 -28732096 + LTR35 LTR ERV1 70 611 -7 259 227 15 114 chr10 111584900 111585032 -28731733 - MLT1H LTR MaLR 0 549 431 2813 176 71 67 chr10 111586805 111587527 -28729238 + LTR8A LTR ERV1 3 727 0 326 259 18 80 chr10 111587571 111587683 -28729082 + MIR SINE MIR 86 190 -72 201 292 92 0 chr10 111587754 111587819 -28728946 - MIR SINE MIR -65 143 73 800 289 35 17 chr10 111587869 111588101 -28728664 - MIR SINE MIR -4 258 23 246 176 0 0 chr10 111588621 111588672 -28728093 + CT-rich Low_complexity Low_complexity 1 51 0 4095 160 38 4 chr10 111589037 111589724 -28727041 + MER50 LTR ERV1 2 711 -23 226 355 64 9 chr10 111590000 111590110 -28726655 + MLT1K LTR MaLR 2 117 -471 2281 175 40 101 chr10 111590357 111591031 -28725734 - MER92B LTR ERV1 0 636 4 210 236 0 0 chr10 111591147 111591202 -28725563 + GA-rich Low_complexity Low_complexity 3 57 0 2205 123 0 19 chr10 111593111 111593429 -28723336 - AluSx SINE Alu 0 312 1 268 281 22 11 chr10 111594297 111594386 -28722379 + T-rich Low_complexity Low_complexity 4 93 0 1869 160 7 3 chr10 111594764 111595071 -28721694 - AluJo SINE Alu -4 308 1 234 0 0 0 chr10 111596300 111596326 -28720439 + (A)n Simple_repeat Simple_repeat 1 26 0 782 258 161 14 chr10 111597449 111597666 -28719099 - MIR SINE MIR 0 262 14 408 341 47 10 chr10 111598081 111598284 -28718481 - MIR SINE MIR -10 252 38 853 304 62 48 chr10 111598672 111599156 -28717609 + LTR16C LTR ERVL 1 491 0 198 0 0 0 chr10 111599709 111599731 -28717034 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1889 126 3 51 chr10 111599733 111600027 -28716738 - AluSx SINE Alu -32 280 1 22 0 0 0 chr10 111600619 111600641 -28716124 + AT_rich Low_complexity Low_complexity 1 22 0 245 329 60 40 chr10 111600860 111601009 -28715756 + L2 LINE L2 3115 3266 -6 252 357 85 8 chr10 111602355 111602484 -28714281 - L2 LINE L2 -16 3256 3118 229 368 0 11 chr10 111602667 111602762 -28714003 + MLT1K LTR MaLR 12 105 -483 441 0 0 0 chr10 111604281 111604330 -28712435 + (TG)n Simple_repeat Simple_repeat 2 50 0 254 315 33 0 chr10 111606597 111606689 -28710076 - LTR37B LTR ERV1 -356 112 18 28 29 0 0 chr10 111606772 111606807 -28709958 + AT_rich Low_complexity Low_complexity 1 35 0 344 253 0 10 chr10 111606828 111606927 -28709838 - MIR SINE MIR 0 262 165 286 271 0 0 chr10 111607496 111607566 -28709199 + MIR SINE MIR 180 249 -13 219 362 39 31 chr10 111607618 111607745 -28709020 - MIR SINE MIR -83 179 52 574 285 117 0 chr10 111607888 111608067 -28708698 + MER58A DNA MER1_type 25 224 0 465 252 148 19 chr10 111608078 111608233 -28708532 - MER5B DNA MER1_type -3 175 1 198 0 0 0 chr10 111608769 111608791 -28707974 + (TG)n Simple_repeat Simple_repeat 1 22 0 300 293 160 0 chr10 111610068 111610174 -28706591 - L2 LINE L2 -2 3270 3148 281 280 86 0 chr10 111611347 111611440 -28705325 + MIR SINE MIR 64 164 -98 2263 71 3 0 chr10 111611442 111611754 -28705011 + AluY SINE Alu 1 313 0 22 0 0 0 chr10 111613022 111613044 -28703721 + AT_rich Low_complexity Low_complexity 1 22 0 2095 128 0 0 chr10 111613143 111613425 -28703340 + AluSq SINE Alu 5 286 -27 2300 97 0 0 chr10 111613875 111614175 -28702590 + AluY SINE Alu 9 308 -3 363 91 0 18 chr10 111614471 111614526 -28702239 - L1PB1 LINE L1 -181 5970 5917 576 126 0 19 chr10 111614526 111614621 -28702144 + L1PB1 LINE L1 6051 6151 0 24 53 0 0 chr10 111614621 111614659 -28702106 + AT_rich Low_complexity Low_complexity 1 38 0 223 344 0 0 chr10 111615739 111615803 -28700962 + L2 LINE L2 3207 3270 -2 1330 180 163 12 chr10 111616330 111616674 -28700091 + MSTD LTR MaLR 1 396 0 6054 239 50 59 chr10 111616680 111618425 -28698340 + MSTD-int LTR MaLR 6 1735 0 335 241 205 0 chr10 111618425 111618537 -28698228 + MSTD LTR MaLR 1 135 -261 1082 185 20 10 chr10 111618563 111618758 -28698007 + MSTD LTR MaLR 200 396 0 223 254 34 0 chr10 111619083 111619142 -28697623 - L3 LINE CR1 -448 1129 1069 200 361 50 42 chr10 111619514 111619755 -28697010 + MIR SINE MIR 20 262 0 183 394 0 0 chr10 111620859 111620930 -28695835 + MIR SINE MIR 45 115 -93 2364 99 0 0 chr10 111621123 111621425 -28695340 - AluY SINE Alu -9 302 1 35 0 0 0 chr10 111622727 111622762 -28694003 + AT_rich Low_complexity Low_complexity 1 35 0 729 214 19 126 chr10 111623937 111624199 -28692566 + MIR SINE MIR 16 249 -13 555 294 35 53 chr10 111624234 111624516 -28692249 + Charlie8 DNA MER1_type 2 278 -2139 35 0 0 0 chr10 111624643 111624678 -28692087 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 111624907 111624930 -28691835 + AT_rich Low_complexity Low_complexity 1 23 0 303 317 71 58 chr10 111625028 111625190 -28691575 - MIR SINE MIR -2 260 93 1878 201 73 15 chr10 111625190 111625667 -28691098 - LTR22 LTR ERVK 0 509 5 303 317 71 58 chr10 111625667 111625728 -28691037 - MIR SINE MIR -169 93 34 21 0 0 0 chr10 111626635 111626656 -28690109 + AT_rich Low_complexity Low_complexity 1 21 0 273 343 40 55 chr10 111628171 111628398 -28688367 - MIR SINE MIR 0 262 32 1904 128 0 31 chr10 111628398 111628717 -28688048 - AluSx SINE Alu 0 314 5 273 343 40 55 chr10 111628717 111628733 -28688032 - MIR SINE MIR -230 32 17 246 287 70 17 chr10 111629077 111629192 -28687573 + MIR3 SINE MIR 37 157 -51 448 95 0 0 chr10 111629308 111629371 -28687394 - AluS SINE Alu -236 77 15 324 304 114 65 chr10 111629841 111629918 -28686847 + MIR SINE MIR 47 119 -143 1691 162 35 3 chr10 111629918 111630202 -28686563 + AluJb SINE Alu 5 297 -15 324 304 114 65 chr10 111630202 111630308 -28686457 + MIR SINE MIR 119 239 -23 187 319 0 0 chr10 111630274 111630321 -28686444 + L2 LINE L2 3251 3297 -16 * 221 309 37 0 chr10 111630517 111630598 -28686167 + L2 LINE L2 3230 3313 0 2164 108 0 0 chr10 111630947 111631235 -28685530 + AluSx SINE Alu 5 292 -20 277 336 66 0 chr10 111631378 111631500 -28685265 + MIR3 SINE MIR 68 197 -11 727 197 8 15 chr10 111632078 111632210 -28684555 + FLAM_C SINE Alu 1 131 -2 366 23 0 0 chr10 111632286 111632329 -28684436 + (CA)n Simple_repeat Simple_repeat 2 44 0 267 234 96 11 chr10 111633176 111633270 -28683495 + MER113 DNA MER1_type? 11 112 -409 2369 88 0 3 chr10 111634055 111634363 -28682402 + AluY SINE Alu 1 307 -4 1965 174 21 13 chr10 111634733 111635113 -28681652 - L1 LINE L1 -1019 6546 6164 1126 238 113 28 chr10 111635095 111635565 -28681200 - L1 LINE L1 -4024 3541 3032 * 1716 268 80 58 chr10 111635632 111636702 -28680063 - L1MEc LINE L1 -4406 1990 878 2147 138 0 0 chr10 111636702 111637014 -28679751 - AluSx SINE Alu 0 312 1 1716 268 80 58 chr10 111637014 111637396 -28679369 - L1MEc LINE L1 -5518 878 506 339 313 22 112 chr10 111638092 111638450 -28678315 - L3 LINE CR1 -147 1430 1105 1143 162 0 98 chr10 111639246 111639365 -28677400 + L1MB2 LINE L1 5391 5471 -700 1516 210 30 10 chr10 111639365 111639670 -28677095 + AluJb SINE Alu 2 312 0 1143 162 0 98 chr10 111639670 111639816 -28676949 + L1MB2 LINE L1 5471 5630 -541 586 202 0 0 chr10 111639816 111639925 -28676840 + L1MB2 LINE L1 6063 6171 0 2075 169 34 31 chr10 111640362 111640912 -28675853 - MLT2A2 LTR ERVL 0 554 1 273 29 0 0 chr10 111641039 111641073 -28675692 + (GAAAA)n Simple_repeat Simple_repeat 4 37 0 366 85 0 0 chr10 111641080 111641139 -28675626 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 318 87 0 0 chr10 111641648 111641694 -28675071 + (CA)n Simple_repeat Simple_repeat 1 46 0 421 324 84 9 chr10 111641720 111641933 -28674832 + MLT1K LTR MaLR 10 238 -350 245 292 139 0 chr10 111642034 111642106 -28674659 + MLT1K LTR MaLR 268 349 -239 330 239 53 53 chr10 111642340 111642453 -28674312 + L2 LINE L2 3197 3309 -4 444 241 74 116 chr10 111642725 111642941 -28673824 + MIR SINE MIR 44 250 -12 372 329 33 7 chr10 111643792 111643944 -28672821 + MIR SINE MIR 52 207 -55 869 198 121 10 chr10 111644051 111644258 -28672507 - L1MC3 LINE L1 -1584 6201 5972 751 211 50 13 chr10 111644256 111644461 -28672304 - L1MC3 LINE L1 -432 5732 5520 * 1717 263 36 51 chr10 111644493 111645018 -28671747 + MLT1E LTR MaLR 1 517 -76 372 218 10 0 chr10 111645021 111645114 -28671651 + LTR37A LTR ERV1 286 379 -47 1282 242 21 28 chr10 111645114 111645440 -28671325 - MLT2D LTR ERVL 0 414 91 405 275 126 57 chr10 111645552 111645869 -28670896 - L2 LINE L2 -275 3038 2702 213 303 0 0 chr10 111645948 111646014 -28670751 - MIR SINE MIR -137 125 60 2271 114 0 0 chr10 111647392 111647698 -28669067 - AluSx SINE Alu -6 306 1 741 257 23 42 chr10 111647783 111647997 -28668768 - MER63A DNA MER1_type 0 210 1 1790 201 90 76 chr10 111648872 111648981 -28667784 + MLT1F1 LTR MaLR 18 124 -443 1838 122 86 0 chr10 111648981 111649260 -28667505 - AluY SINE Alu -8 303 1 1790 201 90 76 chr10 111649260 111649692 -28667073 + MLT1F1 LTR MaLR 124 567 0 269 332 29 58 chr10 111649713 111649921 -28666844 + L2 LINE L2 2686 2887 -427 2172 94 0 10 chr10 111650140 111650437 -28666328 + AluSx SINE Alu 1 294 -18 1958 193 49 27 chr10 111651233 111651638 -28665127 + MLT2D LTR ERVL 1 414 0 274 286 93 29 chr10 111651748 111651888 -28664877 - MIR SINE MIR -5 257 109 225 220 20 0 chr10 111651897 111651947 -28664818 + A-rich Low_complexity Low_complexity 5 55 0 1872 127 0 42 chr10 111652658 111652964 -28663801 - AluSx SINE Alu 0 304 11 1730 168 24 3 chr10 111653797 111654094 -28662671 - AluJb SINE Alu -9 303 1 191 294 20 0 chr10 111654380 111654431 -28662334 + L2 LINE L2 3254 3305 -8 319 277 100 15 chr10 111656359 111656489 -28660276 + MIR SINE MIR 49 189 -73 237 313 73 0 chr10 111657389 111657485 -28659280 + MIR SINE MIR 95 197 -65 192 77 0 0 chr10 111657847 111657873 -28658892 + (TATG)n Simple_repeat Simple_repeat 4 29 0 2437 72 3 0 chr10 111658287 111658600 -28658165 + AluSp SINE Alu 1 314 0 212 185 19 0 chr10 111658662 111658716 -28658049 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 1683 147 82 0 chr10 111659474 111659753 -28657012 - AluSg SINE Alu -8 302 1 314 295 74 0 chr10 111661017 111661139 -28655626 + L2 LINE L2 3168 3298 -15 2016 108 8 0 chr10 111661836 111662104 -28654661 - AluSx SINE Alu -19 293 24 768 158 12 91 chr10 111662112 111662277 -28654488 - FRAM SINE Alu -13 153 2 1217 266 93 30 chr10 111662349 111662841 -28653924 + LTR33A LTR ERVL 1 523 0 414 279 163 17 chr10 111663195 111663367 -28653398 - MIR3 SINE MIR -4 204 8 944 138 18 151 chr10 111664389 111664607 -28652158 - MER5A DNA MER1_type 0 189 1 217 276 0 0 chr10 111664831 111664889 -28651876 - L2 LINE L2 0 3313 3256 226 253 53 0 chr10 111666446 111666521 -28650244 + LTR48 LTR ERV1 96 174 -613 204 47 47 23 chr10 111667035 111667078 -28649687 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 861 245 90 5 chr10 111669550 111669762 -28647003 + MIR SINE MIR 8 237 -25 38 22 0 0 chr10 111669805 111669850 -28646915 + AT_rich Low_complexity Low_complexity 1 45 0 183 257 121 71 chr10 111671042 111671182 -28645583 - MIR SINE MIR -65 197 51 363 44 0 0 chr10 111671190 111671235 -28645530 + (CA)n Simple_repeat Simple_repeat 1 45 0 254 169 34 0 chr10 111671410 111671469 -28645296 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 383 268 96 35 chr10 111671494 111671692 -28645073 - L1MC5 LINE L1 -86 7875 7666 288 53 0 0 chr10 111671996 111672034 -28644731 + (CA)n Simple_repeat Simple_repeat 1 38 0 188 167 71 0 chr10 111672774 111672816 -28643949 + MIR SINE MIR 214 258 -4 386 300 135 0 chr10 111672887 111673057 -28643708 + MIR SINE MIR 54 246 -16 585 215 44 13 chr10 111673138 111673296 -28643469 - MER103 DNA DNA 0 166 4 1849 145 14 21 chr10 111673375 111673683 -28643082 - AluSx SINE Alu 0 306 1 2031 177 24 32 chr10 111674245 111674618 -28642147 + MER93b LTR ERV1 1 370 -3 216 288 0 17 chr10 111674838 111674897 -28641868 + MER5A DNA MER1_type 7 64 -125 * 235 269 0 0 chr10 111674865 111674917 -28641848 - MER5A DNA MER1_type -22 167 116 1409 82 0 0 chr10 111674943 111675113 -28641652 + AluY SINE Alu 127 296 -15 192 307 40 27 chr10 111675121 111675196 -28641569 + MER5A DNA MER1_type 108 183 -6 1178 269 120 72 chr10 111675439 111675949 -28640816 + MLT1H LTR MaLR 6 539 -10 353 289 10 0 chr10 111676078 111676182 -28640583 + MER94 DNA DNA 1 105 -29 1678 193 3 0 chr10 111676548 111676833 -28639932 + AluJo SINE Alu 1 286 -26 299 313 25 85 chr10 111678375 111678454 -28638311 + MER5A DNA MER1_type 1 83 -106 2597 64 0 0 chr10 111678454 111678765 -28638000 + AluY SINE Alu 1 311 0 299 313 25 85 chr10 111678765 111678886 -28637879 + MER5A DNA MER1_type 83 189 0 210 340 38 9 chr10 111679437 111679543 -28637222 + L2 LINE L2 2237 2345 -969 180 0 0 0 chr10 111679572 111679592 -28637173 + (A)n Simple_repeat Simple_repeat 1 20 0 240 372 36 15 chr10 111680020 111680157 -28636608 + L2 LINE L2 2920 3059 -213 2086 144 0 0 chr10 111680524 111680829 -28635936 - AluSx SINE Alu -7 305 1 194 268 18 0 chr10 111681431 111681487 -28635278 - L2 LINE L2 -2 3270 3214 200 333 60 43 chr10 111681674 111681791 -28634974 - L2 LINE L2 -219 3053 2935 1877 134 41 10 chr10 111682738 111683029 -28633736 + AluSx SINE Alu 9 308 -4 1032 112 20 0 chr10 111684192 111684344 -28632421 - L1MA5A LINE L1 -3 6294 6140 195 233 100 33 chr10 111684468 111684528 -28632237 - MIR3 SINE MIR -133 75 12 250 248 202 46 chr10 111685085 111685194 -28631571 + L2 LINE L2 3185 3310 -3 346 270 199 6 chr10 111685841 111686003 -28630762 - MIR SINE MIR -29 233 38 199 313 96 61 chr10 111686147 111686262 -28630503 + L2 LINE L2 3185 3303 -10 236 310 62 23 chr10 111686347 111686476 -28630289 - MIR SINE MIR -43 219 86 1855 150 0 0 chr10 111686753 111687026 -28629739 - AluSx SINE Alu -39 273 1 2196 104 0 0 chr10 111688106 111688434 -28628331 - AluSc SINE Alu 0 328 1 1758 144 61 7 chr10 111688975 111689253 -28627512 + AluSx SINE Alu 1 293 -19 285 146 0 0 chr10 111689253 111689301 -28627464 + (GGA)n Simple_repeat Simple_repeat 2 49 0 200 182 0 0 chr10 111689435 111689468 -28627297 + (CA)n Simple_repeat Simple_repeat 2 34 0 2259 86 0 71 chr10 111689628 111689964 -28626801 - AluSq SINE Alu -1 312 1 21 0 0 0 chr10 111690177 111690198 -28626567 + AT_rich Low_complexity Low_complexity 1 21 0 608 310 80 35 chr10 111691512 111691851 -28624914 - MLT1I LTR MaLR -55 354 1 426 20 0 0 chr10 111692387 111692438 -28624327 + (CA)n Simple_repeat Simple_repeat 2 52 0 417 311 50 67 chr10 111693796 111694156 -28622609 + MLT1K LTR MaLR 174 527 -61 189 268 36 0 chr10 111694748 111694804 -28621961 - MIR SINE MIR -48 214 157 * 335 186 14 14 chr10 111694802 111694872 -28621893 + MIR SINE MIR 83 152 -110 219 245 0 19 chr10 111696072 111696125 -28620640 + GA-rich Low_complexity Low_complexity 4 55 0 510 70 0 0 chr10 111696126 111696197 -28620568 + (CA)n Simple_repeat Simple_repeat 1 71 0 2906 95 22 0 chr10 111696531 111696898 -28619867 + THE1C LTR MaLR 1 375 0 495 319 63 16 chr10 111697347 111697538 -28619227 + MIR SINE MIR 27 226 -36 185 326 43 11 chr10 111698463 111698555 -28618210 - MIR SINE MIR -42 220 126 942 261 74 7 chr10 111698565 111698938 -28617827 - LTR16A LTR ERVL -8 442 7 574 289 29 53 chr10 111700127 111700373 -28616392 + MIR SINE MIR 13 252 -10 2084 117 7 7 chr10 111700672 111700972 -28615793 + AluSx SINE Alu 1 300 -12 524 291 53 13 chr10 111701106 111701257 -28615508 + MIR SINE MIR 20 176 -86 805 45 9 0 chr10 111702079 111702190 -28614575 - LTR9B LTR ERV1 -86 558 447 264 303 13 0 chr10 111702201 111702277 -28614488 + C-rich Low_complexity Low_complexity 4 80 0 1990 109 44 19 chr10 111702279 111702599 -28614166 - LTR9B LTR ERV1 -196 448 121 194 273 13 52 chr10 111702730 111702807 -28613958 + L2 LINE L2 2914 2987 -326 191 324 44 15 chr10 111703053 111703084 -28613681 + L2 LINE L2 3214 3243 -70 869 266 104 30 chr10 111703084 111703516 -28613249 - LTR16B LTR ERVL 0 464 1 191 324 44 15 chr10 111703516 111703552 -28613213 + L2 LINE L2 3243 3283 -30 321 303 87 14 chr10 111703552 111703770 -28612995 + L2 LINE L2 2712 2945 -369 21 36 0 0 chr10 111704113 111704141 -28612624 + AT_rich Low_complexity Low_complexity 1 28 0 1991 192 25 32 chr10 111704929 111705335 -28611430 + MER67D LTR ERV1 14 416 -98 807 135 0 0 chr10 111705408 111705519 -28611246 + FLAM_C SINE Alu 3 113 -30 293 268 70 42 chr10 111705799 111705941 -28610824 + MIR SINE MIR 116 261 -1 350 298 21 0 chr10 111705966 111706060 -28610705 + MIR3 SINE MIR 67 162 -46 455 236 186 19 chr10 111706228 111706389 -28610376 + MIR SINE MIR 7 194 -68 269 268 0 24 chr10 111706802 111706823 -28609942 + CT-rich Low_complexity Low_complexity 2 22 -59 2220 112 7 0 chr10 111706823 111707127 -28609638 - AluSq SINE Alu -7 306 1 269 268 0 24 chr10 111707127 111707187 -28609578 + CT-rich Low_complexity Low_complexity 22 81 0 21 0 0 0 chr10 111709009 111709030 -28607735 + AT_rich Low_complexity Low_complexity 1 21 0 247 365 0 0 chr10 111709597 111709693 -28607072 + MIR3 SINE MIR 96 191 -17 493 273 93 93 chr10 111709855 111710276 -28606489 + MLT1K LTR MaLR 69 560 -28 188 356 189 25 chr10 111711297 111711859 -28604906 + L2 LINE L2 2086 2739 -575 2309 114 0 0 chr10 111711889 111712188 -28604577 + AluSc SINE Alu 6 304 -5 463 224 239 35 chr10 111712524 111712725 -28604040 - MIR SINE MIR 0 262 21 2355 80 3 13 chr10 111713118 111713418 -28603347 - AluSg SINE Alu -13 297 1 234 218 13 103 chr10 111713512 111713528 -28603237 - L2 LINE L2 0 3313 3297 2137 109 0 57 chr10 111713528 111713859 -28602906 - AluSx SINE Alu 0 312 1 234 218 13 103 chr10 111713859 111713920 -28602845 - L2 LINE L2 -16 3297 3243 555 304 33 0 chr10 111713985 111714166 -28602599 - L2 LINE L2 -229 3084 2898 2314 122 0 0 chr10 111714223 111714535 -28602230 - AluSx SINE Alu 0 312 1 203 254 16 32 chr10 111714596 111714659 -28602106 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 423 0 0 0 chr10 111715075 111715122 -28601643 + (TG)n Simple_repeat Simple_repeat 2 48 0 359 326 47 16 chr10 111715279 111715408 -28601357 - MER5A DNA MER1_type 0 189 57 294 238 127 63 chr10 111716226 111716352 -28600413 - MIR3 SINE MIR -66 142 9 596 292 35 31 chr10 111717710 111717936 -28598829 + MIR SINE MIR 12 238 -24 2270 114 0 3 chr10 111719638 111719945 -28596820 + AluSc SINE Alu 1 306 -3 402 320 0 23 chr10 111720233 111720361 -28596404 - MIR SINE MIR -56 152 28 294 307 26 48 chr10 111720368 111720530 -28596235 + MIR SINE MIR 19 175 -83 22 0 0 0 chr10 111721937 111721959 -28594806 + AT_rich Low_complexity Low_complexity 1 22 0 283 291 45 87 chr10 111722697 111723035 -28593730 - L2 LINE L2 -212 3060 2736 1657 168 78 12 chr10 111723056 111723389 -28593376 - L1MA5 LINE L1 -6 6294 5940 207 259 199 0 chr10 111723410 111723541 -28593224 - L2 LINE L2 -571 2743 2587 207 0 0 0 chr10 111723541 111723564 -28593201 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 205 219 137 55 chr10 111724092 111724165 -28592600 + L2 LINE L2 3151 3229 -43 262 324 42 35 chr10 111724224 111724366 -28592399 - MIR SINE MIR -47 215 73 861 242 0 0 chr10 111725986 111726164 -28590601 + AluJb SINE Alu 135 312 0 2188 134 99 9 chr10 111726281 111726625 -28590140 - THE1C LTR MaLR 0 375 1 302 155 12 60 chr10 111728292 111728376 -28588389 - L1ME4a LINE L1 -43 6078 5999 351 292 31 23 chr10 111728692 111728822 -28587943 + MIR3 SINE MIR 78 208 0 1712 113 25 0 chr10 111729672 111729912 -28586853 + AluSc SINE Alu 61 306 -3 185 356 59 42 chr10 111731504 111731622 -28585143 - L2 LINE L2 -10 3262 3143 36 82 0 0 chr10 111731626 111731711 -28585054 + AT_rich Low_complexity Low_complexity 1 85 0 619 230 84 68 chr10 111732947 111733179 -28583586 + MIR SINE MIR 19 257 -5 1533 262 35 51 chr10 111734032 111734230 -28582535 - L1ME3A LINE L1 0 6170 5970 26 0 0 0 chr10 111734230 111734256 -28582509 + AT_rich Low_complexity Low_complexity 1 26 0 2128 109 0 3 chr10 111734256 111734539 -28582226 - AluSg SINE Alu -28 282 1 1533 262 35 51 chr10 111734539 111734558 -28582207 - L1ME3A LINE L1 -198 5972 5645 390 282 75 78 chr10 111734558 111735045 -28581720 - L1MB4 LINE L1 -234 5946 5460 2090 115 0 75 chr10 111735045 111735367 -28581398 - AluSx SINE Alu -14 298 1 390 282 75 78 chr10 111735367 111735559 -28581206 - L1MB4 LINE L1 -720 5460 5269 36 70 0 0 chr10 111735581 111735652 -28581113 + AT_rich Low_complexity Low_complexity 1 71 0 328 271 31 10 chr10 111735745 111735841 -28580924 - L1MB4 LINE L1 -913 5233 5136 1988 129 44 7 chr10 111735856 111736151 -28580614 + AluSx SINE Alu 1 306 -6 718 264 30 86 chr10 111736220 111736292 -28580473 - L1MB4 LINE L1 -1053 5093 5019 2099 104 21 3 chr10 111736292 111736581 -28580184 + AluSx SINE Alu 5 298 -14 718 264 30 86 chr10 111736581 111737261 -28579504 - L1MB4 LINE L1 -1127 5019 4383 243 0 0 0 chr10 111737264 111737291 -28579474 + (CA)n Simple_repeat Simple_repeat 2 28 0 522 254 156 11 chr10 111737400 111737683 -28579082 + L1M4 LINE L1 4801 5124 -1022 21 0 0 0 chr10 111737733 111737754 -28579011 + AT_rich Low_complexity Low_complexity 1 21 0 1442 176 72 4 chr10 111737757 111738019 -28578746 - AluJo SINE Alu -27 285 6 574 321 40 42 chr10 111738024 111738401 -28578364 - L1MEc LINE L1 -4166 2397 2022 300 242 32 53 chr10 111738416 111738511 -28578254 - L1MEc LINE L1 -4601 1962 1870 3675 146 66 7 chr10 111738602 111739314 -28577451 + LTR1 LTR ERV1 32 785 0 351 281 71 43 chr10 111739406 111739826 -28576939 - L1MEc LINE L1 -4920 1464 1033 250 290 0 0 chr10 111740717 111740779 -28575986 + CT-rich Low_complexity Low_complexity 3 64 0 707 227 7 13 chr10 111741251 111741401 -28575364 + MER5A DNA MER1_type 41 189 0 21 0 0 0 chr10 111742129 111742150 -28574615 + AT_rich Low_complexity Low_complexity 1 21 0 223 352 0 0 chr10 111742710 111742764 -28574001 - L2 LINE L2 -86 3186 3133 675 278 6 0 chr10 111743319 111743492 -28573273 - MER58B DNA MER1_type 0 341 168 283 339 18 9 chr10 111743609 111743721 -28573044 + MIR SINE MIR 150 262 0 552 278 23 12 chr10 111744060 111744233 -28572532 - MIR SINE MIR -11 251 77 1758 160 13 20 chr10 111744729 111745029 -28571736 - AluSx SINE Alu -14 298 1 2147 93 40 20 chr10 111746143 111746444 -28570321 + AluY SINE Alu 1 307 -4 408 286 34 34 chr10 111746624 111746799 -28569966 - MER5B DNA MER1_type -1 177 3 4452 114 4 16 chr10 111746803 111747487 -28569278 + L1PB3 LINE L1 5474 6149 -5 28 48 0 0 chr10 111747487 111747529 -28569236 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr10 111747536 111747565 -28569200 + (TG)n Simple_repeat Simple_repeat 2 30 0 544 305 66 18 chr10 111747604 111747830 -28568935 + MIR SINE MIR 16 252 -10 243 302 108 66 chr10 111747929 111748189 -28568576 + L2 LINE L2 2693 3008 -264 336 290 178 18 chr10 111749424 111749593 -28567172 - MIR3 SINE MIR -11 197 2 1351 118 61 0 chr10 111750139 111750367 -28566398 - L1MA6 LINE L1 0 6300 6059 833 104 0 0 chr10 111750534 111750640 -28566125 + AluSg/x SINE Alu 193 298 -14 330 324 135 5 chr10 111751448 111751633 -28565132 - MIR SINE MIR -2 260 52 290 203 162 0 chr10 111752335 111752409 -28564356 - MER96 DNA MER1_type? -13 162 77 228 313 125 0 chr10 111752585 111752681 -28564084 + L2 LINE L2 2913 3020 -252 281 286 78 29 chr10 111752960 111753166 -28563599 + L1MC4a LINE L1 5694 5909 -1899 2384 89 0 0 chr10 111754235 111754537 -28562228 + AluY SINE Alu 1 302 -9 725 160 0 62 chr10 111755245 111755389 -28561376 - FLAM_A SINE Alu 0 142 8 269 222 67 11 chr10 111755406 111755496 -28561269 - L1MC5 LINE L1 -36 7925 7831 356 232 46 67 chr10 111755536 111755628 -28561137 - L1MC5 LINE L1 -234 7727 7635 1651 201 23 104 chr10 111755628 111755708 -28561057 + MLT2B1 LTR ERVL 1 86 -434 2347 95 0 7 chr10 111755708 111756014 -28560751 - AluY SINE Alu -7 304 1 1651 201 23 104 chr10 111756014 111756429 -28560336 + MLT2B1 LTR ERVL 86 447 -73 2099 117 0 44 chr10 111756429 111756745 -28560020 - AluSx SINE Alu -10 302 1 1651 201 23 104 chr10 111756745 111756814 -28559951 + MLT2B1 LTR ERVL 447 520 0 356 232 46 67 chr10 111756814 111756915 -28559850 - L1MC5 LINE L1 -326 7635 7538 189 74 0 0 chr10 111757783 111757810 -28558955 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 234 0 0 0 chr10 111759117 111759143 -28557622 + (CAA)n Simple_repeat Simple_repeat 2 27 0 402 352 36 32 chr10 111760319 111760566 -28556199 - L3 LINE CR1 -41 1536 1289 2105 118 10 0 chr10 111760571 111760868 -28555897 - AluSx SINE Alu -12 300 1 342 277 94 94 chr10 111762912 111763011 -28553754 - MIR SINE MIR 0 262 164 2213 99 3 3 chr10 111763011 111763304 -28553461 - AluSc SINE Alu -16 293 1 342 277 94 94 chr10 111763304 111763439 -28553326 - MIR SINE MIR -97 165 28 2394 84 0 40 chr10 111763909 111764232 -28552533 + AluY SINE Alu 1 310 -1 1951 191 3 8 chr10 111765571 111765932 -28550833 + MLT1A1 LTR MaLR 5 363 -2 228 122 0 0 chr10 111766500 111766541 -28550224 + (TC)n Simple_repeat Simple_repeat 1 41 0 3238 118 6 30 chr10 111766574 111767083 -28549682 + LOR1a LTR ERV1 1 497 0 501 271 8 16 chr10 111767621 111767743 -28549022 - MIR3 SINE MIR -30 178 58 239 191 16 16 chr10 111769679 111769742 -28547023 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 2320 105 0 6 chr10 111771720 111772034 -28544731 + AluSx SINE Alu 1 312 0 29 47 0 0 chr10 111772419 111772462 -28544303 + AT_rich Low_complexity Low_complexity 1 43 0 1109 159 14 0 chr10 111773157 111773364 -28543401 - L1MA7 LINE L1 -235 6056 5847 2264 107 0 16 chr10 111773928 111774236 -28542529 + AluSc SINE Alu 1 303 -6 524 321 83 64 chr10 111775165 111775724 -28541041 - L2 LINE L2 -24 3289 2697 644 254 81 39 chr10 111775731 111775992 -28540773 + L1ME1 LINE L1 5909 6334 0 466 315 59 25 chr10 111775994 111776197 -28540568 - L2 LINE L2 -618 2696 2487 185 289 0 0 chr10 111776444 111776489 -28540276 + L2 LINE L2 3261 3305 -8 291 82 102 0 chr10 111777271 111777320 -28539445 - MER58A DNA MER1_type -1 223 170 * 931 242 14 9 chr10 111777312 111777523 -28539242 - MER58A DNA MER1_type -10 214 3 473 220 50 88 chr10 111778591 111778773 -28537992 - MIR SINE MIR -70 192 18 324 320 56 34 chr10 111779245 111779423 -28537342 - MIR SINE MIR -46 216 35 264 299 77 8 chr10 111779494 111779611 -28537154 - MIR SINE MIR -35 227 103 1657 146 0 90 chr10 111781915 111782236 -28534529 - AluJb SINE Alu -15 297 6 818 229 17 0 chr10 111782334 111782513 -28534252 + L1MB8 LINE L1 5991 6172 -6 727 191 52 0 chr10 111782568 111782704 -28534061 + MER46B DNA MER2_type 2 19 -217 383 230 15 7 chr10 111782706 111782841 -28533924 + L1MA4 LINE L1 6165 6300 0 1279 123 14 0 chr10 111782862 111783082 -28533683 + MER46B DNA MER2_type 14 236 0 482 293 20 13 chr10 111783138 111783288 -28533477 - MIR SINE MIR -111 151 1 271 286 0 29 chr10 111783397 111783467 -28533298 - L2 LINE L2 -7 3306 3239 1682 152 80 0 chr10 111784132 111784421 -28532344 - AluSx SINE Alu 0 312 1 526 320 65 7 chr10 111785347 111785566 -28531199 + MIR SINE MIR 34 262 0 1938 88 28 0 chr10 111787082 111787354 -28529411 + AluSg SINE Alu 26 304 0 564 328 34 5 chr10 111787530 111787734 -28529031 - MIR SINE MIR -38 224 15 416 289 228 7 chr10 111789685 111789834 -28526931 + MER5A DNA MER1_type 8 189 0 266 237 229 15 chr10 111790416 111790547 -28526218 - L3b LINE CR1 -101 1482 1324 1279 142 0 5 chr10 111790839 111791029 -28525736 + MER2 DNA MER2_type 7 195 -150 21 71 0 0 chr10 111791032 111791074 -28525691 + AT_rich Low_complexity Low_complexity 1 42 0 472 316 68 55 chr10 111791235 111791561 -28525204 + MLT1K LTR MaLR 173 502 -86 683 280 106 8 chr10 111791567 111791803 -28524962 + MIR SINE MIR 1 259 -3 21 0 0 0 chr10 111791940 111791961 -28524804 + AT_rich Low_complexity Low_complexity 1 21 0 229 228 53 0 chr10 111792061 111792118 -28524647 + L2 LINE L2 2737 2796 -518 21 0 0 0 chr10 111792573 111792594 -28524171 + AT_rich Low_complexity Low_complexity 1 21 0 331 296 26 58 chr10 111792993 111793149 -28523616 - MIR3 SINE MIR -52 156 41 255 274 16 16 chr10 111794177 111794239 -28522526 + MIR SINE MIR 21 82 -126 2313 104 0 0 chr10 111794284 111794591 -28522174 + AluSg SINE Alu 1 307 -3 675 117 58 0 chr10 111796066 111796220 -28520545 + GA-rich Low_complexity Low_complexity 3 165 0 2120 109 0 39 chr10 111797064 111797375 -28519390 - AluSq SINE Alu -14 299 1 714 194 101 7 chr10 111797387 111797526 -28519239 - FRAM SINE Alu -25 151 1 276 30 0 0 chr10 111798120 111798153 -28518612 + (TG)n Simple_repeat Simple_repeat 1 33 0 210 167 0 0 chr10 111798288 111798324 -28518441 + (TA)n Simple_repeat Simple_repeat 1 36 0 210 150 0 0 chr10 111798962 111799002 -28517763 + (TCCC)n Simple_repeat Simple_repeat 4 43 0 225 0 0 0 chr10 111799219 111799244 -28517521 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2652 49 0 0 chr10 111799318 111799622 -28517143 - AluY SINE Alu -7 304 1 215 91 0 68 chr10 111799669 111799713 -28517052 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1837 128 52 3 chr10 111800041 111800330 -28516435 + AluSg SINE Alu 1 303 -7 469 315 144 40 chr10 111800529 111801069 -28515696 + L2 LINE L2 2710 3304 -9 289 353 17 40 chr10 111801833 111801910 -28514855 + MIR SINE MIR 48 125 -137 3307 134 2 33 chr10 111801910 111802423 -28514342 - LOR1a LTR ERV1 0 497 1 289 353 17 40 chr10 111802423 111802518 -28514247 + MIR SINE MIR 125 216 -46 400 255 10 10 chr10 111803051 111803153 -28513612 + MLT1L LTR MaLR 441 542 -73 223 289 149 25 chr10 111803438 111803559 -28513206 - MIR SINE MIR -10 252 117 606 231 49 36 chr10 111803757 111803806 -28512959 + L1ME LINE L1 5562 5609 -512 1503 129 4 17 chr10 111803806 111804038 -28512727 + AluSq SINE Alu 83 311 -2 606 231 49 36 chr10 111804038 111804213 -28512552 + L1ME LINE L1 5609 5789 -332 859 161 42 6 chr10 111804284 111804452 -28512313 + L1MD3 LINE L1 7822 7995 0 2196 98 20 7 chr10 111805628 111805925 -28510840 - AluSg SINE Alu -9 301 1 711 170 0 0 chr10 111806729 111806835 -28509930 + AluSq/x SINE Alu 2 107 -205 377 91 227 15 chr10 111807564 111807630 -28509135 + MADE1 DNA Mariner 1 80 0 5321 64 143 49 chr10 111808192 111808947 -28507818 - LTR12 LTR ERV1 0 826 1 292 296 10 0 chr10 111808994 111809092 -28507673 + GA-rich Low_complexity Low_complexity 2 100 0 2258 109 7 0 chr10 111809281 111809585 -28507180 - AluSc SINE Alu -3 306 1 799 302 83 36 chr10 111809714 111810158 -28506607 + L2 LINE L2 2849 3313 0 201 274 159 35 chr10 111810177 111810290 -28506475 + MIR3 SINE MIR 45 171 -37 594 283 44 44 chr10 111811318 111811611 -28505154 + L1ME LINE L1 5346 5638 -483 261 0 0 0 chr10 111811995 111812024 -28504741 + (CA)n Simple_repeat Simple_repeat 2 30 0 840 124 58 36 chr10 111812923 111813060 -28503705 + FLAM_C SINE Alu 3 142 -1 216 0 0 0 chr10 111813270 111813294 -28503471 + (CA)n Simple_repeat Simple_repeat 1 24 0 1503 211 38 26 chr10 111813684 111814101 -28502664 - Charlie4a DNA MER1_type -18 490 69 2169 101 14 0 chr10 111814101 111814423 -28502342 + AluSg SINE Alu 1 326 0 1917 157 0 0 chr10 111814732 111815043 -28501722 + AluSx SINE Alu 1 311 0 2101 117 0 3 chr10 111815142 111815424 -28501341 + AluSq SINE Alu 1 281 -32 270 0 0 0 chr10 111815434 111815464 -28501301 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2131 129 0 0 chr10 111815523 111815826 -28500939 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr10 111815998 111816018 -28500747 + (TTG)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr10 111816060 111816082 -28500683 + (T)n Simple_repeat Simple_repeat 1 22 0 276 91 0 0 chr10 111816234 111816278 -28500487 + (A)n Simple_repeat Simple_repeat 1 44 0 437 242 170 33 chr10 111816611 111816679 -28500086 + MER5A DNA MER1_type 9 66 -123 2626 52 0 0 chr10 111816679 111816986 -28499779 + AluY SINE Alu 1 307 -4 437 242 170 33 chr10 111816986 111817070 -28499695 + MER5A DNA MER1_type 66 182 -7 553 323 43 83 chr10 111817157 111817225 -28499540 - L2 LINE L2 -6 3307 3238 971 216 12 0 chr10 111817225 111817392 -28499373 - FAM SINE Alu -6 169 1 553 323 43 83 chr10 111817392 111817904 -28498861 - L2 LINE L2 -75 3238 2751 1711 92 0 0 chr10 111817914 111818132 -28498633 - AluSc SINE Alu -19 290 73 224 279 54 54 chr10 111818963 111819074 -28497691 - MIR SINE MIR -10 252 142 * 262 299 94 26 chr10 111819062 111819179 -28497586 + MIR SINE MIR 58 182 -80 28 71 0 0 chr10 111819575 111819631 -28497134 + AT_rich Low_complexity Low_complexity 1 56 0 2340 65 58 3 chr10 111820902 111821196 -28495569 + AluY SINE Alu 1 310 -1 208 342 53 43 chr10 111821250 111821437 -28495328 + L2 LINE L2 2848 3036 -236 201 226 10 20 chr10 111821721 111821823 -28494942 + GA-rich Low_complexity Low_complexity 2 102 0 1954 141 37 3 chr10 111822713 111823010 -28493755 + AluSc SINE Alu 1 307 -2 182 173 0 19 chr10 111823498 111823550 -28493215 + (CAT)n Simple_repeat Simple_repeat 3 53 0 239 284 0 49 chr10 111823724 111823805 -28492960 + L2 LINE L2 654 730 -2584 22 0 0 0 chr10 111823994 111824016 -28492749 + AT_rich Low_complexity Low_complexity 1 22 0 222 273 121 24 chr10 111824504 111824669 -28492096 + MIR SINE MIR 82 262 0 2013 87 87 0 chr10 111824762 111825037 -28491728 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr10 111826475 111826496 -28490269 + AT_rich Low_complexity Low_complexity 1 21 0 206 191 24 0 chr10 111826724 111826766 -28489999 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 264 100 0 0 chr10 111826911 111826951 -28489814 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr10 111827298 111827320 -28489445 + AT_rich Low_complexity Low_complexity 1 22 0 1706 123 55 0 chr10 111827333 111827569 -28489196 + AluSx SINE Alu 4 252 -60 240 313 12 0 chr10 111827791 111827871 -28488894 - L1MC/D LINE L1 -1892 5916 5836 995 159 12 12 chr10 111828590 111828753 -28488012 + AluJo SINE Alu 7 169 -143 674 194 0 0 chr10 111828753 111828861 -28487904 - AluJo/FLAM SINE Alu -203 109 2 2117 122 10 13 chr10 111829078 111829381 -28487384 + AluSx SINE Alu 1 302 -10 1140 46 8 0 chr10 111829401 111829532 -28487233 + AluY SINE Alu 1 132 -179 2161 109 7 3 chr10 111829545 111829847 -28486918 + AluY SINE Alu 1 303 -8 210 150 0 0 chr10 111830644 111830684 -28486081 + (TCCC)n Simple_repeat Simple_repeat 4 43 0 225 0 0 0 chr10 111830901 111830926 -28485839 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2551 55 0 16 chr10 111831000 111831308 -28485457 - AluY SINE Alu -8 303 1 2109 122 0 0 chr10 111833733 111834021 -28482744 + AluSx SINE Alu 9 296 -16 2273 87 3 0 chr10 111834726 111835013 -28481752 - AluSg1 SINE Alu -11 298 11 422 220 127 17 chr10 111835252 111835370 -28481395 + MER5A DNA MER1_type 55 185 -4 197 284 123 0 chr10 111835682 111835763 -28481002 + MIR SINE MIR 74 164 -98 253 0 0 0 chr10 111835776 111835804 -28480961 + (TTTG)n Simple_repeat Simple_repeat 2 148 0 2331 71 0 0 chr10 111835804 111836086 -28480679 - AluY SINE Alu -1 309 1 2135 126 0 7 chr10 111836910 111837219 -28479546 - AluSg SINE Alu -3 307 1 1429 175 9 69 chr10 111837438 111837758 -28479007 + AluJo SINE Alu 1 301 -11 212 216 0 20 chr10 111837786 111837837 -28478928 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1773 117 39 45 chr10 111838419 111838728 -28478037 + AluY SINE Alu 1 307 -4 191 214 393 0 chr10 111838728 111838812 -28477953 + MER5A DNA MER1_type 66 182 -7 553 323 43 83 chr10 111838899 111838967 -28477798 - L2 LINE L2 -6 3307 3238 971 216 12 0 chr10 111838967 111839134 -28477631 - FAM SINE Alu -6 169 1 553 323 43 83 chr10 111839134 111839646 -28477119 - L2 LINE L2 -75 3238 2751 2327 75 0 3 chr10 111839656 111839948 -28476817 - AluY SINE Alu -20 291 1 195 139 0 0 chr10 111840329 111840365 -28476400 + (TG)n Simple_repeat Simple_repeat 2 37 0 2193 99 23 0 chr10 111840680 111840983 -28475782 + AluY SINE Alu 1 310 -1 374 189 264 9 chr10 111841032 111841138 -28475627 + L1MD3 LINE L1 7144 7276 -719 632 236 0 0 chr10 111841141 111841264 -28475501 + MLT1F1 LTR MaLR 3 125 -442 3262 164 13 30 chr10 111841305 111841914 -28474851 + L1MD3 LINE L1 7383 7981 -14 293 315 11 0 chr10 111842911 111843003 -28473762 + L3 LINE CR1 1475 1567 -10 1275 134 109 4 chr10 111843225 111843464 -28473301 + L1MA5A LINE L1 6028 6291 -6 22 35 0 0 chr10 111843464 111843493 -28473272 + AT_rich Low_complexity Low_complexity 1 29 0 195 152 0 0 chr10 111843525 111843558 -28473207 - L2 LINE L2 -1 3312 3280 306 262 0 0 chr10 111843559 111843643 -28473122 + HsTC2 DNA Tc2 6 89 -1809 2181 142 9 94 chr10 111843643 111844081 -28472684 + Tigger1 DNA MER2_type 1 401 -2017 309 258 0 0 chr10 111844073 111844139 -28472626 + Tigger1 DNA MER2_type 2353 2418 0 * 357 198 62 0 chr10 111844139 111844220 -28472545 + HsTC2 DNA Tc2 1806 1891 -7 951 296 89 18 chr10 111844670 111845008 -28471757 + MLT2E LTR ERVL 39 400 -228 430 299 60 16 chr10 111845341 111845525 -28471240 - MIR SINE MIR -59 203 12 2514 68 3 0 chr10 111845993 111846303 -28470462 + AluY SINE Alu 1 311 0 2480 61 3 3 chr10 111846322 111846633 -28470132 + AluY SINE Alu 1 311 0 288 377 8 0 chr10 111847061 111847191 -28469574 - L3 LINE CR1 -102 1475 1345 291 421 16 8 chr10 111847598 111847719 -28469046 - MIR3 SINE MIR -78 130 9 306 305 9 29 chr10 111849395 111849500 -28467265 + MIR SINE MIR 5 107 -155 530 313 87 36 chr10 111849568 111850056 -28466709 + MLT1K LTR MaLR 3 586 -2 330 294 11 11 chr10 111850058 111850150 -28466615 + MIR SINE MIR 159 250 -12 269 289 132 0 chr10 111850856 111850977 -28465788 + MIR SINE MIR 53 189 -73 207 0 0 0 chr10 111851130 111851153 -28465612 + (TG)n Simple_repeat Simple_repeat 2 24 0 377 258 70 108 chr10 111851295 111851392 -28465373 + MLT1K LTR MaLR 224 323 -265 2086 128 3 3 chr10 111851392 111851689 -28465076 + AluSx SINE Alu 1 297 -15 377 258 70 108 chr10 111851689 111851804 -28464961 + MLT1K LTR MaLR 323 428 -160 353 270 63 19 chr10 111851894 111852022 -28464743 - MIR SINE MIR -64 144 35 1962 167 157 10 chr10 111852241 111852643 -28464122 + LOR1b LTR ERV1 1 461 0 789 247 11 0 chr10 111853352 111853526 -28463239 + MIR SINE MIR 21 196 -66 274 271 35 12 chr10 111854920 111855005 -28461760 + L1MC/D LINE L1 5695 5781 -2027 1843 197 15 59 chr10 111855538 111855711 -28461054 + MLT1A2 LTR MaLR 1 180 -194 2188 97 3 13 chr10 111855711 111856011 -28460754 + AluY SINE Alu 3 299 -12 1843 197 15 59 chr10 111856011 111856227 -28460538 + MLT1A2 LTR MaLR 180 373 -1 390 85 0 0 chr10 111856228 111856287 -28460478 + (CA)n Simple_repeat Simple_repeat 2 60 0 1788 160 0 0 chr10 111856370 111856645 -28460120 + AluSx SINE Alu 1 275 -37 198 0 0 0 chr10 111856650 111856672 -28460093 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 546 308 67 38 chr10 111857293 111857533 -28459232 - MIR SINE MIR 0 262 16 246 81 0 0 chr10 111857919 111857956 -28458809 + (T)n Simple_repeat Simple_repeat 1 37 0 299 86 0 69 chr10 111858063 111858121 -28458644 + AluY SINE Alu 80 133 -168 2097 119 7 3 chr10 111858134 111858436 -28458329 + AluY SINE Alu 1 303 -8 251 178 79 50 chr10 111858563 111858664 -28458101 - Charlie7 DNA MER1_type -57 2555 2452 28 29 0 0 chr10 111858835 111858870 -28457895 + AT_rich Low_complexity Low_complexity 1 35 0 343 313 95 7 chr10 111858874 111859021 -28457744 - L2 LINE L2 -17 3296 3137 374 319 18 37 chr10 111859110 111859273 -28457492 + L3 LINE CR1 557 716 -861 224 339 15 0 chr10 111859322 111859387 -28457378 - MIR SINE MIR -162 100 35 402 293 30 48 chr10 111859503 111859670 -28457095 - MIR3 SINE MIR -8 200 37 1804 167 7 7 chr10 111859779 111860067 -28456698 + AluSx SINE Alu 1 288 -24 228 35 0 0 chr10 111860084 111860113 -28456652 + (GA)n Simple_repeat Simple_repeat 2 30 0 2056 165 5 45 chr10 111860660 111860849 -28455916 - MER46B DNA MER2_type -2496 235 192 2229 123 0 0 chr10 111860849 111861141 -28455624 - AluSx SINE Alu -20 292 1 2056 165 5 45 chr10 111861141 111861326 -28455439 - MER46B DNA MER2_type -2539 192 1 309 285 7 40 chr10 111861608 111861759 -28455006 + GA-rich Low_complexity Low_complexity 4 149 0 2192 110 0 17 chr10 111861887 111862186 -28454579 - AluSx SINE Alu -18 294 1 2602 53 0 0 chr10 111862707 111863010 -28453755 + AluY SINE Alu 1 303 -8 2088 115 0 7 chr10 111865444 111865756 -28451009 - AluSx SINE Alu 0 310 1 525 273 72 41 chr10 111866789 111866983 -28449782 - MIR SINE MIR -12 250 51 2387 87 0 3 chr10 111867169 111867479 -28449286 + AluSg SINE Alu 1 309 -1 1926 119 24 7 chr10 111867779 111868073 -28448692 + AluSx SINE Alu 1 299 -13 2632 168 32 52 chr10 111869077 111869517 -28447248 + MLT2B2 LTR ERVL 3 433 -82 243 0 0 0 chr10 111869517 111869544 -28447221 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 2632 168 32 52 chr10 111869544 111869626 -28447139 + MLT2B2 LTR ERVL 433 515 0 2257 102 0 3 chr10 111870740 111871035 -28445730 + AluSg SINE Alu 1 294 -16 208 374 33 0 chr10 111871252 111871343 -28445422 + L2 LINE L2 2581 2674 -640 288 0 0 0 chr10 111871499 111871531 -28445234 + (TG)n Simple_repeat Simple_repeat 2 33 0 656 257 15 48 chr10 111874320 111874526 -28442239 + L2 LINE L2 3115 3313 0 668 134 0 10 chr10 111876619 111876716 -28440049 - AluSx SINE Alu -10 299 204 1073 93 14 0 chr10 111876719 111876859 -28439906 - AluSx SINE Alu -170 142 1 186 103 0 0 chr10 111877615 111877644 -28439121 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 754 224 70 0 chr10 111879349 111879492 -28437273 - FRAM SINE Alu -24 152 1 217 288 68 90 chr10 111880092 111880235 -28436530 + MIR SINE MIR 19 159 -75 410 294 106 12 chr10 111880248 111880418 -28436347 - MIR SINE MIR -12 250 65 859 96 9 0 chr10 111881185 111881300 -28435465 + AluY SINE Alu 1 116 -195 2274 108 0 3 chr10 111882014 111882311 -28434454 - AluSg1 SINE Alu -13 296 1 2093 125 35 0 chr10 111882311 111882599 -28434166 - AluSx SINE Alu -14 298 1 349 310 41 14 chr10 111882666 111882811 -28433954 - MIR3 SINE MIR 0 208 60 242 377 66 24 chr10 111882934 111883101 -28433664 + L2 LINE L2 3099 3272 0 2130 104 24 13 chr10 111883540 111883838 -28432927 + AluSq SINE Alu 3 303 -10 2412 76 0 3 chr10 111884677 111884981 -28431784 - AluY SINE Alu -8 303 1 633 276 30 83 chr10 111887221 111887486 -28429279 + MIR SINE MIR 5 255 -7 218 359 61 8 chr10 111887549 111887680 -28429085 - L2 LINE L2 -8 3305 3168 2081 100 46 0 chr10 111887970 111888251 -28428514 + AluSc SINE Alu 1 294 -15 186 271 82 82 chr10 111888503 111888625 -28428140 - L2 LINE L2 -20 3293 3172 21 0 0 0 chr10 111889850 111889871 -28426894 + AT_rich Low_complexity Low_complexity 1 21 0 223 250 0 0 chr10 111891295 111891339 -28425426 + polypyrimidine Low_complexity Low_complexity 1 44 0 1598 117 4 0 chr10 111891364 111891594 -28425171 + AluSg SINE Alu 1 231 -79 2175 104 7 7 chr10 111891695 111891994 -28424771 + THE1C-int LTR MaLR 1282 1580 0 825 126 152 13 chr10 111891994 111892145 -28424620 + THE1C LTR MaLR 1 172 -203 31 0 0 0 chr10 111892792 111892823 -28423942 + AT_rich Low_complexity Low_complexity 1 31 0 234 62 0 0 chr10 111893576 111893608 -28423157 + (TG)n Simple_repeat Simple_repeat 1 32 0 884 274 109 68 chr10 111893610 111894113 -28422652 + MLT1H1 LTR MaLR 32 555 0 632 266 86 61 chr10 111894708 111895228 -28421537 - LTR48B LTR ERV1 0 644 1 2452 64 7 0 chr10 111895863 111896159 -28420606 - AluY SINE Alu -13 298 1 212 216 0 20 chr10 111896741 111896792 -28419973 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 1429 175 9 69 chr10 111896820 111897140 -28419625 - AluJo SINE Alu -11 301 1 2135 126 0 7 chr10 111897359 111897668 -28419097 + AluSg SINE Alu 1 307 -3 2332 71 0 0 chr10 111898492 111898802 -28417963 + AluY SINE Alu 1 310 0 197 284 123 0 chr10 111898815 111898896 -28417869 - MIR SINE MIR -98 164 74 422 220 127 17 chr10 111899208 111899326 -28417439 - MER5A DNA MER1_type -4 185 55 2273 87 3 0 chr10 111899565 111899852 -28416913 + AluSg1 SINE Alu 11 298 -11 2109 122 0 0 chr10 111900557 111900845 -28415920 - AluSx SINE Alu -16 296 9 36 0 0 0 chr10 111901548 111901584 -28415181 + AT_rich Low_complexity Low_complexity 1 36 0 181 0 69 0 chr10 111901626 111901655 -28415110 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 2181 77 0 0 chr10 111901999 111902299 -28414466 + AluY SINE Alu 10 309 0 2188 103 17 0 chr10 111902474 111902775 -28413990 + AluSp SINE Alu 1 306 -7 293 0 27 0 chr10 111903577 111903614 -28413151 + (TTCC)n Simple_repeat Simple_repeat 2 39 0 2409 81 0 0 chr10 111903979 111904286 -28412479 + AluY SINE Alu 3 309 -2 1949 128 0 7 chr10 111904360 111904705 -28412060 - AluSc SINE Alu 0 343 1 2519 57 0 7 chr10 111904715 111905016 -28411749 - AluY SINE Alu -12 299 1 477 0 0 0 chr10 111906401 111906454 -28410311 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 336 222 16 0 chr10 111906461 111906524 -28410241 - AluJ/FRAM SINE Alu -20 282 219 2105 111 14 14 chr10 111908143 111908275 -28408490 + AluSx SINE Alu 1 132 -180 2298 103 0 0 chr10 111908275 111908575 -28408190 + AluSq SINE Alu 1 300 -13 2105 111 14 14 chr10 111908575 111908731 -28408034 + AluSx SINE Alu 131 289 -23 835 250 26 53 chr10 111909095 111909244 -28407521 + MIR SINE MIR 4 145 -117 2494 52 0 7 chr10 111909244 111909549 -28407216 + AluY SINE Alu 1 303 -8 835 250 26 53 chr10 111909549 111909663 -28407102 + MIR SINE MIR 145 260 -2 241 293 27 0 chr10 111909772 111909847 -28406918 + CT-rich Low_complexity Low_complexity 3 79 0 213 283 145 36 chr10 111909964 111910102 -28406663 - L2 LINE L2 -1 3312 3160 2266 86 0 61 chr10 111910233 111910560 -28406205 + AluY SINE Alu 1 307 -4 29 28 0 0 chr10 111910834 111910870 -28405895 + AT_rich Low_complexity Low_complexity 1 36 0 303 143 0 0 chr10 111911175 111911217 -28405548 - THE1B LTR MaLR 0 355 314 6629 47 0 1 chr10 111911217 111912251 -28404514 - L1PA5 LINE L1 -537 5617 4585 4673 53 2 0 chr10 111912251 111912783 -28403982 + L1PA5 LINE L1 5608 6151 -3 1794 135 82 20 chr10 111912783 111913086 -28403679 - THE1B LTR MaLR -42 322 1 2209 110 3 3 chr10 111913939 111914248 -28402517 - AluSc SINE Alu 0 309 1 290 324 29 22 chr10 111915096 111915235 -28401530 - MIR3 SINE MIR -7 201 62 260 300 147 35 chr10 111915991 111916161 -28400604 - MIR SINE MIR -62 200 12 2577 58 0 3 chr10 111916273 111916585 -28400180 + AluY SINE Alu 1 311 0 189 380 35 21 chr10 111917453 111917595 -28399170 + L2 LINE L2 2600 2743 -571 206 333 87 27 chr10 111917703 111917853 -28398912 + L2 LINE L2 2871 3029 -243 38 39 0 0 chr10 111918221 111918273 -28398492 + AT_rich Low_complexity Low_complexity 1 52 0 421 251 128 107 chr10 111919133 111919358 -28397407 + L1ME4a LINE L1 5350 5569 -552 2025 130 3 13 chr10 111919358 111919659 -28397106 - AluSc SINE Alu -11 298 1 421 251 128 107 chr10 111919659 111920173 -28396592 + L1ME4a LINE L1 5569 6105 -16 2691 161 31 15 chr10 111920363 111920817 -28395948 + LOR1b LTR ERV1 1 461 0 235 214 0 0 chr10 111920849 111920891 -28395874 + LOR1a LTR ERV1 456 497 0 1678 157 113 23 chr10 111920942 111921286 -28395479 + THE1C LTR MaLR 1 375 0 1242 104 135 14 chr10 111921286 111921508 -28395257 + THE1C-int LTR MaLR 1 249 -1331 875 205 17 67 chr10 111921632 111921871 -28394894 - AluJo SINE Alu -85 227 1 201 238 0 0 chr10 111922140 111922182 -28394583 + (TG)n Simple_repeat Simple_repeat 1 42 0 313 250 20 20 chr10 111922516 111922616 -28394149 + LTR67 LTR ERVL 454 553 -4 204 269 0 19 chr10 111924148 111924200 -28392565 + L2 LINE L2 2599 2649 -665 225 250 19 0 chr10 111924463 111924515 -28392250 + (TA)n Simple_repeat Simple_repeat 1 53 0 928 290 76 23 chr10 111924916 111925312 -28391453 + LTR16C LTR ERVL 75 491 0 345 236 0 0 chr10 111925350 111925422 -28391343 - MIR SINE MIR -87 175 104 369 300 65 75 chr10 111925884 111925970 -28390795 + L1ME4a LINE L1 5328 5413 -708 1822 163 3 10 chr10 111925970 111926276 -28390489 - AluJb SINE Alu -8 304 1 369 300 65 75 chr10 111926276 111926303 -28390462 + L1ME4a LINE L1 5413 5439 -682 2274 95 0 3 chr10 111926303 111926598 -28390167 + AluY SINE Alu 1 294 -17 369 300 65 75 chr10 111926598 111926790 -28389975 + L1ME4a LINE L1 5439 5631 -490 398 301 79 63 chr10 111926791 111927107 -28389658 + L1ME4a LINE L1 5599 5919 -202 2070 147 0 0 chr10 111927338 111927638 -28389127 + AluY SINE Alu 1 300 -11 181 281 88 0 chr10 111928859 111928916 -28387849 - L2 LINE L2 -70 3243 3182 471 308 119 35 chr10 111929427 111929972 -28386793 + L1ME4a LINE L1 2856 3446 -2700 2678 69 3 95 chr10 111930586 111930657 -28386108 - THE1A LTR MaLR 0 355 279 186 43 0 0 chr10 111930657 111930680 -28386085 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1950 102 4 0 chr10 111930690 111930954 -28385811 - AluSq SINE Alu -48 265 1 2678 69 3 95 chr10 111930954 111931262 -28385503 - THE1A LTR MaLR -85 270 1 400 308 174 27 chr10 111931529 111932116 -28384649 + L1ME4a LINE L1 5445 6117 -4 1925 116 0 0 chr10 111932185 111932436 -28384329 + AluSx SINE Alu 1 251 -61 189 0 0 0 chr10 111933925 111933946 -28382819 + (GA)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr10 111934231 111934253 -28382512 + AT_rich Low_complexity Low_complexity 1 22 0 288 0 0 0 chr10 111934898 111934930 -28381835 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 292 115 10 chr10 111934997 111935093 -28381672 + MIR SINE MIR 147 252 -10 226 308 10 48 chr10 111935590 111935694 -28381071 + MIR SINE MIR 37 136 -72 596 205 0 53 chr10 111936294 111936445 -28380320 + MER5B DNA MER1_type 1 143 -35 1987 121 3 3 chr10 111936445 111936762 -28380003 + AluY SINE Alu 1 317 0 183 80 0 0 chr10 111936915 111936940 -28379825 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 231 338 65 29 chr10 111937004 111937143 -28379622 + MER5A DNA MER1_type 44 187 -2 2237 103 3 10 chr10 111937281 111937593 -28379172 - AluSg SINE Alu 0 310 1 195 42 0 0 chr10 111938576 111938600 -28378165 + (CAAAC)n Simple_repeat Simple_repeat 5 28 0 373 252 52 37 chr10 111939173 111939308 -28377457 + MIR3 SINE MIR 62 198 -10 232 302 12 0 chr10 111940154 111940240 -28376525 + L2 LINE L2 2817 2903 -410 352 269 103 40 chr10 111940787 111940962 -28375803 + L2 LINE L2 3128 3313 0 230 167 48 0 chr10 111941084 111941168 -28375597 + (TA)n Simple_repeat Simple_repeat 1 88 0 252 86 0 0 chr10 111941217 111941252 -28375513 + (CA)n Simple_repeat Simple_repeat 2 36 0 46 0 0 0 chr10 111941277 111941323 -28375442 + AT_rich Low_complexity Low_complexity 1 46 0 2320 92 24 0 chr10 111941391 111941684 -28375081 - AluSx SINE Alu -12 300 1 465 298 77 42 chr10 111941736 111942021 -28374744 + L2 LINE L2 3014 3308 -5 729 224 44 44 chr10 111942151 111942356 -28374409 - MER20 DNA MER1_type -14 205 1 2323 82 0 10 chr10 111942799 111943104 -28373661 - AluY SINE Alu -9 302 1 297 306 12 0 chr10 111943200 111943285 -28373480 + GA-rich Low_complexity Low_complexity 3 88 0 1704 178 10 3 chr10 111943485 111943778 -28372987 - AluJb SINE Alu -17 295 1 216 243 114 0 chr10 111943874 111943944 -28372821 - MIR SINE MIR -93 115 38 434 288 45 30 chr10 111944417 111944549 -28372216 - MER94 DNA DNA 0 134 1 4789 166 61 57 chr10 111947158 111947528 -28369237 - L1MC1 LINE L1 0 6333 5966 2343 86 0 7 chr10 111947528 111947830 -28368935 - AluSc SINE Alu -9 300 1 4789 166 61 57 chr10 111947830 111948604 -28368161 - L1MC1 LINE L1 -367 5966 5176 2299 98 14 0 chr10 111948617 111948912 -28367853 + AluSp SINE Alu 1 299 -14 23 33 0 0 chr10 111949059 111949089 -28367676 + AT_rich Low_complexity Low_complexity 1 30 0 453 19 0 0 chr10 111949103 111949157 -28367608 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 313 214 55 76 chr10 111950803 111950948 -28365817 + L1ME LINE L1 5695 5836 -285 490 324 5 22 chr10 111950969 111951154 -28365611 + MIR SINE MIR 33 214 -48 286 225 12 12 chr10 111951193 111951273 -28365492 - MER116 DNA Mariner 0 80 1 351 0 0 0 chr10 111951470 111951509 -28365256 + (CA)n Simple_repeat Simple_repeat 2 40 0 297 0 0 0 chr10 111951508 111951541 -28365224 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 5181 107 154 117 chr10 111951735 111953307 -28363458 - pTR5 LTR ERV1 0 2438 136 35 0 0 0 chr10 111953574 111953609 -28363156 + AT_rich Low_complexity Low_complexity 1 35 0 2653 36 0 3 chr10 111955165 111955467 -28361298 + AluY SINE Alu 1 301 -10 374 295 15 4 chr10 111956154 111956334 -28360431 + MER41B LTR ERV1 114 429 -206 497 316 189 7 chr10 111956745 111957030 -28359735 + L2 LINE L2 2950 3286 -27 2127 190 17 12 chr10 111957232 111957642 -28359123 - L1MC1 LINE L1 0 6613 6202 14060 139 31 55 chr10 111957643 111959807 -28356958 + Tigger1 DNA MER2_type 2 2216 -202 212 0 36 0 chr10 111959807 111959835 -28356930 + (TA)n Simple_repeat Simple_repeat 1 29 0 807 181 97 0 chr10 111959835 111959990 -28356775 - FAM SINE Alu -5 170 1 14060 139 31 55 chr10 111959990 111960132 -28356633 + Tigger1 DNA MER2_type 2215 2249 -169 189 0 0 0 chr10 111960132 111960153 -28356612 + (CA)n Simple_repeat Simple_repeat 2 22 0 14060 139 31 55 chr10 111960153 111960319 -28356446 + Tigger1 DNA MER2_type 2249 2417 -1 3247 154 28 49 chr10 111960319 111960878 -28355887 - L1MC1 LINE L1 -409 6204 5635 2116 139 3 0 chr10 111960878 111961188 -28355577 - AluSx SINE Alu -1 311 1 3247 154 28 49 chr10 111961188 111961267 -28355498 - L1MC1 LINE L1 -978 5635 5578 2096 127 13 0 chr10 111961267 111961567 -28355198 - AluSq SINE Alu -9 304 1 3247 154 28 49 chr10 111961567 111961600 -28355165 - L1MC1 LINE L1 -1035 5578 5546 4816 180 81 14 chr10 111961611 111962079 -28354686 - L1MA9 LINE L1 0 6312 5877 2335 81 0 19 chr10 111962079 111962387 -28354378 - AluY SINE Alu -7 304 3 4816 180 81 14 chr10 111962387 111963215 -28353550 - L1MA9 LINE L1 -435 5877 4903 43766 33 21 1 chr10 111963235 111969265 -28347500 - L1PA2 LINE L1 0 6155 3 327 253 104 135 chr10 111969319 111969734 -28347031 + L2 LINE L2 2216 2617 -697 9196 217 42 36 chr10 111969737 111971070 -28345695 - L1MC1 LINE L1 -869 5557 4234 2354 107 0 3 chr10 111971070 111971379 -28345386 + AluSc SINE Alu 1 308 -1 9196 217 42 36 chr10 111971379 111974751 -28342014 - L1MC1 LINE L1 -2192 4234 715 2192 110 0 10 chr10 111974751 111975052 -28341713 - AluSx SINE Alu -14 298 1 9196 217 42 36 chr10 111975052 111975752 -28341013 - L1MC1 LINE L1 -5711 715 21 297 283 44 18 chr10 111975806 111975919 -28340846 + L2 LINE L2 3154 3269 -3 2185 93 40 3 chr10 111977060 111977360 -28339405 + AluY SINE Alu 1 311 0 2050 114 17 0 chr10 111978122 111978412 -28338353 - AluSx SINE Alu -17 295 1 856 292 21 0 chr10 111979148 111979388 -28337377 - MIR SINE MIR 0 262 18 2138 121 3 10 chr10 111979838 111980143 -28336622 + AluSx SINE Alu 1 303 -9 2219 94 3 0 chr10 111980332 111980618 -28336147 + AluSc SINE Alu 1 287 -22 226 268 84 0 chr10 111980787 111980858 -28335907 + MIR3 SINE MIR 126 202 -6 1065 76 0 0 chr10 111981386 111981518 -28335247 + AluY SINE Alu 1 132 -179 263 361 120 0 chr10 111981533 111981641 -28335124 - MIR3 SINE MIR -54 154 34 22 0 0 0 chr10 111981929 111981951 -28334814 + AT_rich Low_complexity Low_complexity 1 22 0 2026 151 0 3 chr10 111981966 111982265 -28334500 + AluSx SINE Alu 1 298 -14 9609 175 31 44 chr10 111982836 111984166 -28332599 + L1PA12 LINE L1 11 1357 -6224 2074 112 3 3 chr10 111984166 111984499 -28332266 + AluSx SINE Alu 1 333 0 9609 175 31 44 chr10 111984499 111984512 -28332253 + L1PA12 LINE L1 1357 1369 -6212 2073 92 4 0 chr10 111984512 111984772 -28331993 + AluSx SINE Alu 38 298 -14 9609 175 31 44 chr10 111984772 111985734 -28331031 + L1PA12 LINE L1 1369 2576 -5005 13078 183 15 16 chr10 111985740 111986008 -28330757 + L1PA12 LINE L1 3007 3274 -4332 2433 71 3 0 chr10 111986008 111986303 -28330462 - AluY SINE Alu -15 296 1 13078 183 15 16 chr10 111986303 111990629 -28326136 + L1PA12 LINE L1 3274 7606 0 1028 328 59 34 chr10 111990659 111991255 -28325510 - L2 LINE L2 0 3313 2686 191 287 148 30 chr10 111991283 111991384 -28325381 + MIR SINE MIR 134 246 -16 2145 92 0 4 chr10 111991612 111991884 -28324881 + AluSg SINE Alu 1 271 -39 1069 78 0 59 chr10 111991900 111992053 -28324712 + AluSp/q SINE Alu 160 303 -10 299 240 264 0 chr10 111992617 111992742 -28324023 + MIR SINE MIR 26 183 -79 196 397 25 8 chr10 111992901 111993022 -28323743 + L3b LINE CR1 1446 1568 -15 374 321 0 18 chr10 111993146 111993258 -28323507 - L2 LINE L2 -36 3277 3168 319 339 154 18 chr10 111993409 111993630 -28323135 - L2 LINE L2 -353 2961 2711 5384 119 12 0 chr10 111993686 111994524 -28322241 - L1PB3 LINE L1 -3 6151 5304 244 284 91 34 chr10 111994524 111994612 -28322153 - L2 LINE L2 -599 2715 2623 36 53 0 0 chr10 111994719 111994776 -28321989 + AT_rich Low_complexity Low_complexity 1 57 0 250 284 75 0 chr10 111995661 111995728 -28321037 + L2 LINE L2 3157 3228 -44 359 195 20 6 chr10 111996023 111996269 -28320496 + AluJo SINE Alu 5 302 0 204 324 14 14 chr10 111996637 111996711 -28320054 - MIR SINE MIR -188 74 1 1566 159 128 12 chr10 111997040 111997338 -28319427 + MLT1A1 LTR MaLR 1 342 -23 261 0 0 0 chr10 111997338 111997367 -28319398 + (TA)n Simple_repeat Simple_repeat 2 30 0 1566 159 128 12 chr10 111997367 111997395 -28319370 + MLT1A1 LTR MaLR 342 365 0 500 218 140 95 chr10 111997473 111997585 -28319180 + MER20B DNA MER1_type 267 373 -410 2269 84 7 10 chr10 111997585 111997881 -28318884 + AluY SINE Alu 3 297 -14 500 218 140 95 chr10 111997881 111998168 -28318597 + MER20B DNA MER1_type 373 684 -99 1882 218 117 38 chr10 111998172 111998746 -28318019 + MLT1E2 LTR MaLR 5 623 -3 295 323 20 20 chr10 111999216 111999315 -28317450 - MER5A DNA MER1_type -43 146 48 276 333 75 17 chr10 111999219 111999339 -28317426 + MER5A DNA MER1_type 57 183 -6 * 2335 68 44 7 chr10 111999524 111999819 -28316946 + AluY SINE Alu 1 306 -5 273 321 73 29 chr10 112000182 112000319 -28316446 - L3b LINE CR1 -84 1499 1357 256 279 25 38 chr10 112000556 112000635 -28316130 - L2 LINE L2 -4 3268 3191 1356 109 100 5 chr10 112000889 112001099 -28315666 + MER30 DNA MER1_type 1 230 0 739 219 79 6 chr10 112001113 112001291 -28315474 - MER58A DNA MER1_type -6 218 28 261 98 0 0 chr10 112001366 112001407 -28315358 + (CA)n Simple_repeat Simple_repeat 2 42 0 2314 71 17 14 chr10 112002129 112002424 -28314341 - AluY SINE Alu -15 296 1 207 204 0 23 chr10 112002809 112002853 -28313912 + CT-rich Low_complexity Low_complexity 5 47 0 1851 148 31 86 chr10 112004388 112004691 -28312074 + THE1B LTR MaLR 1 281 -83 2151 116 0 0 chr10 112004691 112004999 -28311766 + AluSq SINE Alu 1 308 0 1851 148 31 86 chr10 112004999 112005079 -28311686 + THE1B LTR MaLR 281 364 0 210 289 58 0 chr10 112005591 112005643 -28311122 - L2 LINE L2 -11 3302 3248 848 142 0 0 chr10 112006178 112006305 -28310460 + AluSg/x SINE Alu 173 299 -13 243 341 22 51 chr10 112006617 112006755 -28310010 + MIR3 SINE MIR 7 140 -68 212 293 17 0 chr10 112007183 112007241 -28309524 + L2 LINE L2 3250 3308 -5 313 296 0 0 chr10 112008050 112008131 -28308634 + MER5A DNA MER1_type 9 89 -100 1009 83 0 8 chr10 112008193 112008326 -28308439 + AluY SINE Alu 1 132 -179 2253 71 51 3 chr10 112008329 112008623 -28308142 + AluY SINE Alu 1 308 -3 404 320 44 39 chr10 112008706 112008887 -28307878 + MER5A DNA MER1_type 7 188 -1 911 222 0 0 chr10 112010213 112010375 -28306390 - FRAM SINE Alu -4 162 1 201 175 0 0 chr10 112011278 112011318 -28305447 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 2226 88 0 29 chr10 112011607 112011915 -28304850 - AluSq SINE Alu -14 299 1 409 333 54 0 chr10 112012111 112012240 -28304525 + L2 LINE L2 3137 3272 0 501 127 0 0 chr10 112012942 112013021 -28303744 + (TG)n Simple_repeat Simple_repeat 2 80 0 258 345 26 9 chr10 112013550 112013663 -28303102 + MIR SINE MIR 79 193 -69 2080 136 0 0 chr10 112014041 112014328 -28302437 + AluSx SINE Alu 1 287 -25 2283 187 49 96 chr10 112014344 112014859 -28301906 + L1MB3 LINE L1 5486 5959 -224 2176 141 0 3 chr10 112014859 112015171 -28301594 + AluSx SINE Alu 1 311 -1 2283 187 49 96 chr10 112015171 112015373 -28301392 + L1MB3 LINE L1 5959 6169 -14 2509 57 0 3 chr10 112015603 112015904 -28300861 - AluY SINE Alu -11 300 1 189 373 146 9 chr10 112017648 112017758 -28299007 - MIR SINE MIR -64 144 20 240 337 58 12 chr10 112017786 112017872 -28298893 + L2 LINE L2 3190 3279 -34 646 242 44 0 chr10 112018138 112018320 -28298445 - MER3 DNA MER1_type -13 196 7 338 279 65 32 chr10 112018348 112018502 -28298263 - MIR SINE MIR -10 252 94 209 320 112 56 chr10 112021005 112021183 -28295582 - MIR SINE MIR -66 196 9 219 69 0 0 chr10 112021189 112021218 -28295547 + (T)n Simple_repeat Simple_repeat 1 29 0 1936 167 0 0 chr10 112021239 112021538 -28295227 + AluSx SINE Alu 1 299 -13 2174 118 0 29 chr10 112021538 112021853 -28294912 + AluSg SINE Alu 1 306 -4 189 0 0 0 chr10 112021919 112021940 -28294825 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 2281 121 0 0 chr10 112022807 112023114 -28293651 - AluSx SINE Alu -5 307 1 211 200 0 0 chr10 112023619 112023664 -28293101 + (TG)n Simple_repeat Simple_repeat 2 46 0 2452 65 0 0 chr10 112024396 112024718 -28292047 - AluY SINE Alu 0 311 1 2232 108 3 0 chr10 112026349 112026645 -28290120 + AluSp SINE Alu 1 297 -16 246 269 67 58 chr10 112026705 112026809 -28289956 - MIR SINE MIR -79 183 79 1807 133 3 17 chr10 112026921 112027223 -28289542 + L1PB3 LINE L1 5857 6154 0 192 129 16 0 chr10 112027264 112027299 -28289466 - MIR SINE MIR -115 147 113 491 269 91 43 chr10 112027756 112027942 -28288823 - MIR3 SINE MIR -1 207 13 2347 110 8 25 chr10 112029161 112029321 -28287444 + THE1B LTR MaLR 1 162 -202 1952 141 3 26 chr10 112029321 112029625 -28287140 - AluSx SINE Alu -15 297 1 2347 110 8 25 chr10 112029625 112029829 -28286936 + THE1B LTR MaLR 162 359 -5 2358 112 0 0 chr10 112029829 112030141 -28286624 + AluSx SINE Alu 1 312 0 260 309 0 15 chr10 112032503 112032571 -28284194 - L2 LINE L2 -21 3251 3185 2189 135 0 0 chr10 112032748 112033052 -28283713 + AluSq SINE Alu 1 304 -9 863 257 68 9 chr10 112033112 112033334 -28283431 + MIR SINE MIR 16 250 -12 386 261 89 32 chr10 112033486 112033643 -28283122 - MIR SINE MIR -82 180 15 344 328 104 73 chr10 112034891 112035672 -28281093 + L2 LINE L2 1538 2293 -1021 2252 80 0 10 chr10 112035672 112035960 -28280805 + AluY SINE Alu 1 285 -26 180 0 0 0 chr10 112035960 112035980 -28280785 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 344 328 104 73 chr10 112035980 112036175 -28280590 + L2 LINE L2 2292 2546 -768 251 363 99 15 chr10 112036547 112036748 -28280017 + L2 LINE L2 2976 3193 -79 503 284 101 66 chr10 112036798 112037021 -28279744 - L2 LINE L2 0 3313 3074 2324 118 0 6 chr10 112037021 112037334 -28279431 - AluSx SINE Alu -1 311 1 503 284 101 66 chr10 112037334 112037427 -28279338 - L2 LINE L2 -239 3074 2986 2490 127 3 3 chr10 112038466 112038828 -28277937 + THE1B LTR MaLR 1 362 -2 231 303 56 78 chr10 112038914 112039056 -28277709 + L2 LINE L2 3134 3272 0 401 311 52 60 chr10 112039180 112039562 -28277203 + L1MC/D LINE L1 5373 5751 -2057 394 271 104 78 chr10 112039615 112039708 -28277057 + MIR SINE MIR 61 150 -112 2116 106 33 13 chr10 112039708 112040009 -28276756 + AluSq SINE Alu 1 307 -6 394 271 104 78 chr10 112040009 112040107 -28276658 + MIR SINE MIR 150 257 -5 1351 201 79 11 chr10 112040537 112040815 -28275950 + AluJo SINE Alu 1 297 -15 2287 94 0 7 chr10 112040824 112041122 -28275643 + AluY SINE Alu 1 296 -15 215 217 22 0 chr10 112042719 112042765 -28274000 + (TG)n Simple_repeat Simple_repeat 2 48 0 * 262 244 47 0 chr10 112042732 112042818 -28273947 + (TA)n Simple_repeat Simple_repeat 1 90 0 199 194 0 0 chr10 112042930 112042961 -28273804 + MIR SINE MIR 67 97 -165 197 322 0 0 chr10 112042990 112043049 -28273716 + MIR SINE MIR 194 252 -10 203 200 0 0 chr10 112043054 112043089 -28273676 + (TTA)n Simple_repeat Simple_repeat 1 35 0 2429 70 3 7 chr10 112043376 112043677 -28273088 + AluY SINE Alu 1 300 -11 25 51 0 0 chr10 112043792 112043831 -28272934 + AT_rich Low_complexity Low_complexity 1 39 0 229 302 0 16 chr10 112043870 112043933 -28272832 - L2 LINE L2 -9 3263 3202 2440 171 59 9 chr10 112044010 112044449 -28272316 + LOR1b LTR ERV1 1 461 0 408 40 0 0 chr10 112044689 112044739 -28272026 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 1458 216 3 27 chr10 112044840 112045132 -28271633 + AluJo SINE Alu 1 285 -27 34 0 0 0 chr10 112045147 112045181 -28271584 + AT_rich Low_complexity Low_complexity 1 34 0 351 65 0 0 chr10 112045289 112045335 -28271430 + (TG)n Simple_repeat Simple_repeat 2 47 0 1210 260 65 9 chr10 112045344 112045667 -28271098 + MER2 DNA MER2_type 3 343 -1 1716 202 42 0 chr10 112045683 112046014 -28270751 - MER7A DNA MER2_type -1 345 3 626 212 0 8 chr10 112046641 112046759 -28270006 - LTR28 LTR ERV1 -903 117 1 472 199 28 43 chr10 112046908 112047049 -28269716 + LTR27 LTR ERV1 289 427 -209 * 642 227 20 45 chr10 112047041 112047239 -28269526 + LTR28 LTR ERV1 528 720 -300 * 1554 224 153 57 chr10 112047211 112047706 -28269059 + MER52A LTR ERV1 1209 1751 -4 954 102 0 29 chr10 112047851 112047988 -28268777 + AluSp SINE Alu 1 133 -180 2190 100 3 7 chr10 112047992 112048291 -28268474 + AluSp SINE Alu 1 298 -15 2326 86 9 16 chr10 112049303 112049618 -28267147 - AluSq SINE Alu 0 313 1 329 286 92 0 chr10 112049808 112049927 -28266838 - MER69A DNA AcHobo -47 130 1 213 366 104 30 chr10 112049980 112050114 -28266651 - L2 LINE L2 0 3272 3129 642 202 16 8 chr10 112051827 112051956 -28264809 - FLAM_A SINE Alu -3 130 1 2436 88 7 0 chr10 112052540 112052847 -28263918 - AluSc SINE Alu 0 309 1 21 36 0 0 chr10 112053453 112053481 -28263284 + AT_rich Low_complexity Low_complexity 1 28 0 1432 194 94 32 chr10 112053762 112054174 -28262591 + MER66A LTR ERV1 130 478 0 2231 101 19 0 chr10 112054264 112054571 -28262194 + AluSp SINE Alu 1 313 0 2632 43 7 0 chr10 112055257 112055561 -28261204 - AluY SINE Alu -5 306 1 1687 176 17 14 chr10 112056459 112056617 -28260148 - AluJo SINE Alu -21 291 135 243 0 0 0 chr10 112056617 112056644 -28260121 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 2071 126 0 0 chr10 112056646 112056932 -28259833 - AluY SINE Alu -25 286 1 1687 176 17 14 chr10 112056932 112057060 -28259705 - AluJo SINE Alu -177 135 1 749 281 80 60 chr10 112057100 112057498 -28259267 - MLT1L LTR MaLR -9 606 201 232 233 82 27 chr10 112057730 112057803 -28258962 - MIR SINE MIR -112 150 74 222 246 18 18 chr10 112057935 112057992 -28258773 - L2 LINE L2 -5 3267 3211 207 0 0 0 chr10 112059042 112059065 -28257700 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 2423 53 7 20 chr10 112060070 112060372 -28256393 + AluY SINE Alu 2 299 -12 208 206 0 151 chr10 112061422 112061495 -28255270 - MIR3 SINE MIR -15 193 132 390 182 39 0 chr10 112061857 112061934 -28254831 - MER69 DNA AcHobo -1143 83 4 197 366 28 0 chr10 112062002 112062073 -28254692 + MIR SINE MIR 31 103 -105 738 45 0 0 chr10 112062079 112062168 -28254597 + 5S rRNA rRNA 2 90 -31 237 258 146 34 chr10 112062168 112062257 -28254508 + MIR3 SINE MIR 98 196 -12 2197 115 0 10 chr10 112062394 112062699 -28254066 - AluSq SINE Alu -11 302 1 2124 118 0 35 chr10 112062792 112063107 -28253658 - AluSq SINE Alu -9 304 1 2269 95 3 0 chr10 112064173 112064458 -28252307 + AluSx SINE Alu 17 302 -10 329 241 84 12 chr10 112064608 112064691 -28252074 - MIR SINE MIR -150 112 24 184 266 21 85 chr10 112066189 112066283 -28250482 - L2 LINE L2 -18 3295 3208 180 297 45 45 chr10 112067554 112067665 -28249100 - L2 LINE L2 -12 3301 3191 229 342 76 27 chr10 112067669 112067894 -28248871 + L2 LINE L2 2710 2945 -369 6076 73 22 1 chr10 112068396 112069253 -28247512 - L1PA8 LINE L1 -105 6067 5195 23 0 0 0 chr10 112069353 112069376 -28247389 + AT_rich Low_complexity Low_complexity 1 23 0 2162 110 3 3 chr10 112069718 112070009 -28246756 - AluSq SINE Alu -22 291 1 2415 81 0 0 chr10 112070282 112070577 -28246188 + AluSg SINE Alu 1 295 -15 1050 216 10 0 chr10 112070577 112070771 -28245994 - MER58A DNA MER1_type -28 196 1 214 313 42 0 chr10 112070776 112070872 -28245893 - L2 LINE L2 -655 2659 2560 192 273 102 34 chr10 112071107 112071195 -28245570 - MIR3 SINE MIR -1 207 114 442 275 101 42 chr10 112071302 112071331 -28245434 + MER102b DNA MER1_type 133 159 -1269 197 33 33 0 chr10 112071331 112071361 -28245404 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 442 275 101 42 chr10 112071361 112071520 -28245245 + MER102b DNA MER1_type 159 332 -9 447 283 181 10 chr10 112071537 112071742 -28245023 + MIR SINE MIR 22 261 -1 238 298 75 21 chr10 112071732 112071826 -28244939 - MIR SINE MIR -101 161 63 * 252 282 146 10 chr10 112074667 112074770 -28241995 + L2 LINE L2 3154 3270 -2 705 171 0 0 chr10 112074873 112075048 -28241717 + (TA)n Simple_repeat Simple_repeat 1 175 0 2428 84 0 0 chr10 112076159 112076457 -28240308 - AluY SINE Alu -13 298 1 1872 115 4 4 chr10 112076693 112076988 -28239777 + AluSq SINE Alu 24 318 0 2192 102 7 3 chr10 112077305 112077598 -28239167 - AluSc SINE Alu -13 296 3 242 268 176 28 chr10 112077598 112077740 -28239025 - MIR SINE MIR -69 193 31 203 215 21 21 chr10 112077960 112078053 -28238712 + (CATATA)n Simple_repeat Simple_repeat 6 98 0 314 252 67 59 chr10 112078063 112078198 -28238567 + L1M4 LINE L1 1574 1709 -4833 384 40 0 0 chr10 112078277 112078327 -28238438 + (TG)n Simple_repeat Simple_repeat 2 51 0 728 256 84 32 chr10 112078330 112078851 -28237914 - L1ME LINE L1 -5019 1051 568 387 335 96 29 chr10 112079059 112079537 -28237228 - L1ME LINE L1 -5544 526 17 27 29 0 0 chr10 112079600 112079634 -28237131 + AT_rich Low_complexity Low_complexity 1 34 0 1956 148 0 35 chr10 112080746 112081063 -28235702 + AluSg SINE Alu 3 308 -2 2466 87 0 0 chr10 112081440 112081751 -28235014 - AluY SINE Alu 0 311 1 2247 106 7 0 chr10 112082042 112082335 -28234430 - AluSx SINE Alu -17 295 1 247 289 11 33 chr10 112083489 112083579 -28233186 + GA-rich Low_complexity Low_complexity 6 93 0 1491 186 36 49 chr10 112084255 112084561 -28232204 - AluJo SINE Alu -10 302 1 2440 88 0 0 chr10 112084588 112084895 -28231870 - AluSc SINE Alu -2 307 1 273 252 72 54 chr10 112085177 112085288 -28231477 - MIR SINE MIR -63 145 33 1768 153 47 13 chr10 112085557 112085858 -28230907 + AluJb SINE Alu 1 311 -1 2507 50 0 7 chr10 112086796 112087094 -28229671 + AluY SINE Alu 1 296 -15 1320 184 93 76 chr10 112087537 112087712 -28229053 - LTR37A LTR ERV1 0 426 255 1956 102 40 43 chr10 112087712 112088015 -28228750 + AluSg1 SINE Alu 1 302 -7 1320 184 93 76 chr10 112088015 112088258 -28228507 - LTR37A LTR ERV1 -171 255 1 210 342 123 0 chr10 112088906 112089020 -28227745 + L2 LINE L2 3177 3304 -9 199 273 30 61 chr10 112089707 112089806 -28226959 + L2 LINE L2 1469 1564 -1750 183 226 29 0 chr10 112090947 112091049 -28225716 + (CA)n Simple_repeat Simple_repeat 2 106 0 21 0 0 0 chr10 112091910 112091931 -28224834 + AT_rich Low_complexity Low_complexity 1 21 0 2242 85 3 33 chr10 112092083 112092388 -28224377 + AluSc SINE Alu 1 296 -13 1649 121 0 0 chr10 112093305 112093528 -28223237 - AluSx SINE Alu -89 223 1 2227 111 3 0 chr10 112094738 112095036 -28221729 + AluSx SINE Alu 1 299 -13 396 0 0 0 chr10 112095194 112095238 -28221527 + (TG)n Simple_repeat Simple_repeat 2 45 0 2495 69 0 3 chr10 112095658 112095964 -28220801 + AluY SINE Alu 1 305 -6 1893 159 36 22 chr10 112096069 112096428 -28220337 - THE1B LTR MaLR 0 364 1 289 273 10 10 chr10 112096833 112096932 -28219833 + L1ME4a LINE L1 5628 5726 -395 799 189 7 14 chr10 112096947 112097090 -28219675 + FRAM SINE Alu 5 146 -30 232 239 80 9 chr10 112097367 112097480 -28219285 + L1ME4a LINE L1 5992 6112 -9 182 333 22 33 chr10 112097891 112097981 -28218784 - L2 LINE L2 0 3313 3225 202 294 59 0 chr10 112098025 112098093 -28218672 + L2 LINE L2 3200 3271 -1 2547 48 0 0 chr10 112098302 112098594 -28218171 + AluY SINE Alu 3 294 -17 1213 266 116 16 chr10 112098941 112099442 -28217323 + MLT1G1 LTR MaLR 1 595 0 2167 86 0 4 chr10 112100480 112100783 -28215982 + AluSc SINE Alu 1 302 0 635 254 93 81 chr10 112104212 112104460 -28212305 - MIR SINE MIR 0 262 12 381 369 61 34 chr10 112104609 112104902 -28211863 + L2 LINE L2 2971 3271 -1 210 135 0 0 chr10 112105730 112105740 -28211025 + (GA)n Simple_repeat Simple_repeat 2 11 -27 2172 107 13 10 chr10 112105740 112106048 -28210717 + AluSc SINE Alu 1 309 0 210 135 0 0 chr10 112106048 112106074 -28210691 + (GA)n Simple_repeat Simple_repeat 10 38 0 912 220 40 0 chr10 112106336 112106509 -28210256 + MER5A DNA MER1_type 1 180 -9 722 276 143 64 chr10 112106919 112107296 -28209469 - L2 LINE L2 0 3313 2907 686 172 8 0 chr10 112107622 112107750 -28209015 + L1PB3 LINE L1 6023 6151 -3 385 254 94 54 chr10 112107841 112108117 -28208648 + L1ME3A LINE L1 4705 4991 -1155 1101 160 0 6 chr10 112108117 112108286 -28208479 + AluSg/x SINE Alu 132 299 -13 1443 271 50 20 chr10 112108299 112109278 -28207487 + L1ME3A LINE L1 4998 6002 -168 1879 125 16 48 chr10 112109415 112109726 -28207039 - AluSx SINE Alu -7 305 5 1218 221 35 70 chr10 112109729 112109945 -28206820 + MER39 LTR ERV1 297 494 -213 2283 72 0 39 chr10 112109945 112110250 -28206515 - AluY SINE Alu -18 293 1 1218 221 35 70 chr10 112110250 112110435 -28206330 + MER39 LTR ERV1 494 684 -23 468 264 7 7 chr10 112110489 112110629 -28206136 + L1ME3A LINE L1 6023 6162 -8 358 326 41 9 chr10 112110712 112110872 -28205893 + MIR SINE MIR 43 212 -50 183 356 0 0 chr10 112111565 112111610 -28205155 - L2 LINE L2 -90 3182 3138 635 67 22 0 chr10 112112995 112113084 -28203681 + AluY SINE Alu 1 91 -220 2175 131 0 6 chr10 112113386 112113699 -28203066 + AluY SINE Alu 1 311 0 21 57 0 0 chr10 112114038 112114073 -28202692 + AT_rich Low_complexity Low_complexity 1 35 0 200 340 123 19 chr10 112114594 112114700 -28202065 - L2 LINE L2 -10 3262 3146 338 274 69 0 chr10 112114926 112115028 -28201737 - MER5A DNA MER1_type 0 189 81 250 300 44 0 chr10 112115218 112115308 -28201457 + MIR SINE MIR 132 225 -37 183 350 50 12 chr10 112115340 112115420 -28201345 - MIR3 SINE MIR -117 91 9 218 245 0 20 chr10 112115957 112116006 -28200759 + MER5A DNA MER1_type 6 53 -136 1783 182 41 23 chr10 112116063 112116103 -28200662 - MSTB1 LTR MaLR -26 406 368 1871 123 0 0 chr10 112116103 112116355 -28200410 + AluSx SINE Alu 57 308 -4 1783 182 41 23 chr10 112116355 112116718 -28200047 - MSTB1 LTR MaLR -64 368 6 587 272 23 42 chr10 112116784 112117049 -28199716 - L1MC5 LINE L1 -72 7889 7630 2235 92 10 0 chr10 112118493 112118786 -28197979 + AluY SINE Alu 1 296 -15 490 112 10 10 chr10 112119168 112119266 -28197499 + (TA)n Simple_repeat Simple_repeat 1 98 0 212 366 98 9 chr10 112119990 112120102 -28196663 + L2 LINE L2 3101 3222 -50 189 74 0 0 chr10 112120127 112120154 -28196611 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 324 321 57 33 chr10 112120482 112120714 -28196051 + MIR SINE MIR 15 246 -16 392 302 32 0 chr10 112121011 112121137 -28195628 + MIR3 SINE MIR 76 205 -3 195 346 0 0 chr10 112122029 112122081 -28194684 - L2 LINE L2 -307 2965 2914 343 289 132 19 chr10 112122394 112122553 -28194212 - MIR SINE MIR 0 262 86 703 237 0 52 chr10 112123757 112123930 -28192835 - FRAM SINE Alu -15 161 1 2099 127 124 18 chr10 112125140 112125527 -28191238 - MSTA LTR MaLR 0 428 1 2382 107 0 0 chr10 112126553 112126863 -28189902 + AluSq SINE Alu 1 310 -3 189 132 0 0 chr10 112127418 112127456 -28189309 + (A)n Simple_repeat Simple_repeat 1 38 0 272 253 0 36 chr10 112127953 112128036 -28188729 - MIR SINE MIR -49 213 134 257 136 80 11 chr10 112128041 112128129 -28188636 + (TA)n Simple_repeat Simple_repeat 2 95 0 232 269 19 0 chr10 112128130 112128182 -28188583 - MIR SINE MIR -181 81 29 969 132 85 11 chr10 112128382 112128571 -28188194 - MER2 DNA MER2_type -142 203 1 2223 111 7 0 chr10 112129119 112129417 -28187348 + AluSx SINE Alu 1 300 -12 2118 120 13 0 chr10 112129978 112130278 -28186487 - AluSx SINE Alu -8 304 1 1296 77 16 0 chr10 112130524 112130707 -28186058 + L1PA4 LINE L1 5968 6153 -2 292 351 75 0 chr10 112130714 112130808 -28185957 + MIR SINE MIR 49 149 -113 2237 66 14 0 chr10 112131219 112131506 -28185259 + AluY SINE Alu 17 307 -4 928 218 210 4 chr10 112131985 112132228 -28184537 + AluJo SINE Alu 3 295 -17 427 265 0 108 chr10 112132735 112132901 -28183864 + MIR SINE MIR 81 228 -34 184 231 0 26 chr10 112132869 112132908 -28183857 + L2 LINE L2 3201 3238 -34 * 376 302 36 57 chr10 112132990 112133321 -28183444 + L1MC4a LINE L1 5584 5907 -1901 238 254 69 31 chr10 112133577 112133707 -28183058 + MLT1K LTR MaLR 411 545 -43 192 206 32 95 chr10 112133989 112134052 -28182713 + MIR SINE MIR 115 173 -89 2208 105 0 0 chr10 112134767 112135052 -28181713 - AluSq SINE Alu -15 298 14 190 236 73 18 chr10 112135957 112136012 -28180753 + L2 LINE L2 3180 3237 -76 234 0 0 0 chr10 112136668 112136694 -28180071 + (A)n Simple_repeat Simple_repeat 1 26 0 2096 112 37 3 chr10 112136697 112136992 -28179773 + AluSg SINE Alu 1 305 -5 203 320 165 0 chr10 112137238 112137341 -28179424 - L2 LINE L2 -494 2820 2701 240 288 183 20 chr10 112137344 112137497 -28179268 - MER5A DNA MER1_type 0 189 12 546 225 33 13 chr10 112137739 112137890 -28178875 - ORSL DNA AcHobo -1 274 121 186 43 0 0 chr10 112137895 112137918 -28178847 + (TG)n Simple_repeat Simple_repeat 2 24 0 235 246 25 25 chr10 112137918 112137934 -28178831 + (TA)n Simple_repeat Simple_repeat 1 16 -106 1355 225 50 27 chr10 112137934 112138103 -28178662 - AluJo SINE Alu -7 305 125 2237 105 3 0 chr10 112138103 112138399 -28178366 - AluSc SINE Alu -12 297 1 1355 225 50 27 chr10 112138399 112138527 -28178238 - AluJo SINE Alu -187 125 1 235 246 25 25 chr10 112138527 112138632 -28178133 + (TA)n Simple_repeat Simple_repeat 15 122 0 292 236 14 0 chr10 112138637 112138709 -28178056 - ORSL DNA AcHobo -200 75 3 2218 132 0 0 chr10 112139133 112139444 -28177321 - AluSx SINE Alu -1 311 1 1693 164 13 23 chr10 112139955 112140254 -28176511 + AluJb SINE Alu 2 297 -15 513 289 47 28 chr10 112140514 112140725 -28176040 + L2 LINE L2 3095 3309 -4 3829 24 9 7 chr10 112141128 112141583 -28175182 + L1PA3 LINE L1 5699 6154 -1 236 149 21 0 chr10 112143143 112143190 -28173575 + CT-rich Low_complexity Low_complexity 1 48 0 497 336 83 29 chr10 112143191 112143468 -28173297 - L2 LINE L2 -5 3308 3017 272 289 87 19 chr10 112143907 112144011 -28172754 - MIR SINE MIR -68 140 30 239 282 39 29 chr10 112144247 112144350 -28172415 - L3 LINE CR1 -865 712 609 203 333 29 67 chr10 112144676 112144781 -28171984 - L2 LINE L2 -8 3305 3205 553 249 40 34 chr10 112146087 112146264 -28170501 - MER5B DNA MER1_type 0 178 1 362 318 86 41 chr10 112146516 112146770 -28169995 - L2 LINE L2 -212 3060 2798 223 311 146 48 chr10 112146905 112147111 -28169654 + MIR SINE MIR 37 262 0 217 263 18 0 chr10 112149742 112149799 -28166966 + CT-rich Low_complexity Low_complexity 5 62 0 786 231 6 0 chr10 112149964 112150137 -28166628 - FAM SINE Alu -1 174 1 2493 70 0 0 chr10 112150194 112150495 -28166270 - AluY SINE Alu -10 301 1 24 0 0 0 chr10 112150558 112150582 -28166183 + AT_rich Low_complexity Low_complexity 1 24 0 691 236 160 2 chr10 112150703 112150907 -28165858 + MIR SINE MIR 21 254 -8 181 350 72 10 chr10 112151905 112152002 -28164763 - L3b LINE CR1 -21 1562 1460 200 158 118 40 chr10 112152452 112152528 -28164237 + MIR SINE MIR 127 208 -54 451 307 26 62 chr10 112154089 112154281 -28162484 - MIR SINE MIR -5 257 73 21 0 0 0 chr10 112154456 112154477 -28162288 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 112154579 112154618 -28162147 + AT_rich Low_complexity Low_complexity 1 39 0 188 216 59 0 chr10 112156386 112156437 -28160328 - MIR3 SINE MIR -3 205 152 238 277 101 61 chr10 112156996 112157144 -28159621 - MIR SINE MIR -78 184 31 442 45 0 30 chr10 112157553 112157620 -28159145 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 414 0 0 0 chr10 112157621 112157667 -28159098 + (TCTCC)n Simple_repeat Simple_repeat 2 47 0 1263 171 142 18 chr10 112157667 112157804 -28158961 - AluSg SINE Alu -2 308 189 239 0 0 31 chr10 112157804 112157836 -28158929 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1263 171 142 18 chr10 112157836 112157972 -28158793 - AluSg SINE Alu -121 189 1 399 282 194 0 chr10 112157977 112158147 -28158618 - MIR SINE MIR -48 214 12 824 202 30 75 chr10 112159822 112160057 -28156708 + MIR SINE MIR 16 241 -21 2380 79 0 13 chr10 112160740 112161045 -28155720 + AluY SINE Alu 2 302 -9 2517 74 0 0 chr10 112161518 112161830 -28154935 - AluSq SINE Alu -1 312 1 2345 196 90 12 chr10 112161977 112162421 -28154344 - L1MB7 LINE L1 -21 6163 5662 180 0 0 0 chr10 112162421 112162441 -28154324 + (TG)n Simple_repeat Simple_repeat 1 20 0 2345 196 90 12 chr10 112162441 112162574 -28154191 - L1MB7 LINE L1 -522 5662 5541 850 184 112 4 chr10 112163882 112164115 -28152650 - LTR50 LTR ERVL -6 789 532 879 196 175 0 chr10 112164191 112164482 -28152283 - LTR50 LTR ERVL -452 343 2 321 232 0 0 chr10 112164691 112164786 -28151979 + (TA)n Simple_repeat Simple_repeat 1 95 0 21 0 0 0 chr10 112164854 112164875 -28151890 + AT_rich Low_complexity Low_complexity 1 21 0 202 271 252 19 chr10 112165492 112165599 -28151166 - L2 LINE L2 0 3313 3182 829 266 26 17 chr10 112165650 112165908 -28150857 - MIR SINE MIR 0 262 3 5685 146 49 6 chr10 112166033 112167054 -28149711 - L1MC1 LINE L1 0 6333 5269 25 0 0 0 chr10 112167838 112167863 -28148902 + AT_rich Low_complexity Low_complexity 1 25 0 463 236 111 0 chr10 112168382 112168526 -28148239 - MER103 DNA DNA -4 162 3 478 321 108 21 chr10 112169692 112169932 -28146833 - MIR SINE MIR 0 262 2 24 0 0 0 chr10 112170452 112170476 -28146289 + AT_rich Low_complexity Low_complexity 1 24 0 2344 91 0 3 chr10 112171099 112171396 -28145369 + AluY SINE Alu 1 296 -15 471 352 67 0 chr10 112173098 112173308 -28143457 - MIR SINE MIR -38 224 1 210 128 0 0 chr10 112174457 112174496 -28142269 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2074 135 16 13 chr10 112174621 112174932 -28141833 - AluSx SINE Alu 0 312 1 1831 93 0 16 chr10 112175033 112175291 -28141474 + AluY SINE Alu 55 308 -3 2248 85 9 35 chr10 112176241 112176558 -28140207 - AluY SINE Alu -2 309 1 29 28 0 0 chr10 112176742 112176778 -28139987 + AT_rich Low_complexity Low_complexity 1 36 0 182 146 0 36 chr10 112177277 112177332 -28139433 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 186 308 29 96 chr10 112178632 112178736 -28138029 + MIR SINE MIR 1 97 -165 2300 89 3 0 chr10 112178907 112179210 -28137555 + AluY SINE Alu 5 308 -3 210 337 54 11 chr10 112179681 112179773 -28136992 + MIR SINE MIR 151 246 -16 1755 71 119 4 chr10 112180062 112180343 -28136422 - AluYa8 SINE Alu 0 310 1 251 320 48 10 chr10 112181680 112181783 -28134982 + L2 LINE L2 3166 3272 0 273 57 0 0 chr10 112183075 112183110 -28133655 + (CA)n Simple_repeat Simple_repeat 2 36 0 217 301 12 12 chr10 112184165 112184248 -28132517 + L3b LINE CR1 1116 1198 -385 207 0 0 0 chr10 112185039 112185062 -28131703 + (A)n Simple_repeat Simple_repeat 1 23 0 282 316 11 42 chr10 112185242 112185337 -28131428 - MIR SINE MIR -169 93 2 813 290 78 65 chr10 112185359 112185548 -28131217 + L2 LINE L2 2527 2712 -601 2153 110 0 23 chr10 112185548 112185849 -28130916 + AluSc SINE Alu 1 294 -15 813 290 78 65 chr10 112185849 112186404 -28130361 + L2 LINE L2 2712 3294 -19 190 340 43 32 chr10 112188447 112188541 -28128224 + MIR SINE MIR 16 110 -152 2289 101 3 0 chr10 112188661 112188967 -28127798 - AluSx SINE Alu -5 307 1 185 286 36 18 chr10 112189464 112189520 -28127245 + MIR SINE MIR 92 148 -60 610 248 79 25 chr10 112189899 112190101 -28126664 + LTR33 LTR ERVL 303 515 -6 344 361 53 0 chr10 112191045 112191178 -28125587 - MIR3 SINE MIR -63 145 6 206 61 0 30 chr10 112191707 112191740 -28125025 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 483 221 63 16 chr10 112191741 112191868 -28124897 - MER3 DNA MER1_type -76 133 1 366 349 46 0 chr10 112192017 112192126 -28124639 - L2 LINE L2 -22 3250 3137 2480 58 0 3 chr10 112192448 112192743 -28124022 + AluY SINE Alu 1 294 -17 281 260 40 30 chr10 112194861 112194961 -28121804 - MLT1K LTR MaLR -3 585 485 477 334 75 40 chr10 112194978 112195481 -28121284 - MLT1K LTR MaLR -65 523 3 2054 158 36 31 chr10 112196179 112196724 -28120041 - MLT2A2 LTR ERVL 0 554 1 268 200 83 0 chr10 112197191 112197251 -28119514 + L2 LINE L2 3205 3269 -3 1658 214 5 27 chr10 112197555 112197925 -28118840 + MLT1A1 LTR MaLR 4 365 0 2267 205 38 6 chr10 112197926 112198423 -28118342 + MLT1A1-int LTR MaLR 1 513 -1222 1408 324 15 9 chr10 112198426 112199081 -28117684 + L1M3a LINE L1 11 782 -5173 2398 155 46 7 chr10 112199089 112199501 -28117264 - MSTA LTR MaLR 0 428 1 7983 168 16 67 chr10 112199501 112201242 -28115523 - MSTA-int LTR MaLR 0 1651 1 2121 174 47 38 chr10 112201242 112201666 -28115099 - MSTA LTR MaLR 0 428 1 11600 221 52 24 chr10 112201669 112204369 -28112396 + L1MB1 LINE L1 392 3014 -3063 2309 99 0 13 chr10 112204369 112204681 -28112084 + AluSc SINE Alu 1 308 -1 11600 221 52 24 chr10 112204681 112207682 -28109083 + L1MB1 LINE L1 3014 5954 -123 469 178 37 0 chr10 112207699 112207806 -28108959 + L1MA9 LINE L1 6180 6290 -22 565 173 0 0 chr10 112208006 112208110 -28108655 + MLT-int LTR MaLR 498 601 -1134 271 138 35 17 chr10 112208295 112208353 -28108412 + MLT-int LTR MaLR 680 738 -997 1867 185 19 40 chr10 112208550 112208978 -28107787 + MLT1A1-int LTR MaLR 1317 1735 0 1994 171 34 8 chr10 112208978 112209334 -28107431 + MLT1A1 LTR MaLR 1 365 0 246 295 78 31 chr10 112209803 112209932 -28106833 + MLT1I LTR MaLR 135 269 -140 186 303 30 0 chr10 112210619 112210685 -28106080 - MIR SINE MIR -121 141 74 249 302 0 0 chr10 112211238 112211301 -28105464 + L2 LINE L2 3210 3272 0 322 324 160 19 chr10 112211996 112212209 -28104556 + MIR SINE MIR 6 248 -14 21 57 0 0 chr10 112212859 112212894 -28103871 + AT_rich Low_complexity Low_complexity 1 35 0 207 204 0 0 chr10 112214035 112214079 -28102686 + A-rich Low_complexity Low_complexity 1 44 0 416 310 41 14 chr10 112214604 112214749 -28102016 + MIR SINE MIR 1 149 -113 2395 68 0 29 chr10 112214757 112215067 -28101698 + AluY SINE Alu 6 306 -5 201 196 22 0 chr10 112215662 112215708 -28101057 + A-rich Low_complexity Low_complexity 2 48 0 2320 114 0 0 chr10 112215898 112216205 -28100560 - AluSc SINE Alu -2 307 1 198 0 0 0 chr10 112217180 112217202 -28099563 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 377 307 9 9 chr10 112218773 112218924 -28097841 + MIR SINE MIR 7 156 -65 352 283 200 28 chr10 112219363 112219567 -28097198 + MIR SINE MIR 3 244 -18 1140 172 12 31 chr10 112221734 112221990 -28094775 - L1MB4 LINE L1 -13 6167 5917 1793 147 28 7 chr10 112222395 112222681 -28094084 + AluSx SINE Alu 1 292 -20 180 137 59 0 chr10 112223076 112223127 -28093638 + CT-rich Low_complexity Low_complexity 1 54 0 24 32 0 0 chr10 112223800 112223831 -28092934 + AT_rich Low_complexity Low_complexity 1 31 0 473 161 161 32 chr10 112223944 112224099 -28092666 - LTR48 LTR ERV1 -4 783 609 1017 193 119 17 chr10 112224147 112224534 -28092231 - LTR48 LTR ERV1 -328 459 1 183 129 0 0 chr10 112225010 112225041 -28091724 + (TAG)n Simple_repeat Simple_repeat 1 31 0 2276 82 0 3 chr10 112225313 112225604 -28091161 + AluY SINE Alu 1 290 -21 233 314 314 0 chr10 112225926 112226031 -28090734 + L2 LINE L2 3127 3264 -8 262 303 138 46 chr10 112226198 112226307 -28090458 + L2 LINE L2 3136 3254 -18 245 315 22 22 chr10 112227464 112227553 -28089212 - MIR SINE MIR -70 138 50 * 594 314 95 16 chr10 112227542 112227784 -28088981 - MIR SINE MIR 0 262 2 229 258 79 0 chr10 112228464 112228537 -28088228 + L1ME LINE L1 5688 5765 -397 2373 87 7 0 chr10 112228538 112228837 -28087928 + AluSp SINE Alu 1 301 -12 360 325 43 0 chr10 112228869 112228986 -28087779 + L2 LINE L2 3188 3309 -4 189 259 0 17 chr10 112229064 112229122 -28087643 + L2 LINE L2 3257 3313 0 183 184 0 0 chr10 112230469 112230507 -28086258 + GA-rich Low_complexity Low_complexity 2 39 0 433 295 114 29 chr10 112230758 112230968 -28085797 - MIR SINE MIR -2 260 33 490 329 24 6 chr10 112231722 112231912 -28084853 - MIR SINE MIR -35 227 34 312 273 0 13 chr10 112231986 112232063 -28084702 + MIR3 SINE MIR 101 176 -32 426 338 33 0 chr10 112233735 112233886 -28082879 - MIR3 SINE MIR -35 173 18 223 355 85 33 chr10 112234127 112234278 -28082487 + L2 LINE L2 2608 2750 -564 1671 159 36 20 chr10 112234278 112234451 -28082314 - AluJb SINE Alu -6 306 124 2251 107 0 7 chr10 112234451 112234760 -28082005 - AluSg SINE Alu -3 307 1 1671 159 36 20 chr10 112234760 112234887 -28081878 - AluJb SINE Alu -188 124 1 223 355 85 33 chr10 112234887 112235065 -28081700 + L2 LINE L2 2750 2954 -360 224 387 32 8 chr10 112237439 112237563 -28079202 + L2 LINE L2 3145 3271 -1 341 157 0 238 chr10 112237608 112237755 -28079010 + MIR SINE MIR 2 113 -149 350 212 202 0 chr10 112237859 112237958 -28078807 + MIR SINE MIR 144 262 0 299 96 19 0 chr10 112238437 112238489 -28078276 + (TC)n Simple_repeat Simple_repeat 2 54 0 1433 194 104 0 chr10 112239201 112239510 -28077255 - MER58B DNA MER1_type 0 341 1 410 288 48 118 chr10 112240859 112241172 -28075593 + L2 LINE L2 2967 3257 -15 2630 107 11 5 chr10 112241554 112241927 -28074838 + THE1C LTR MaLR 1 375 0 4271 155 30 38 chr10 112241927 112242303 -28074462 + THE1C-int LTR MaLR 1 378 -1202 2614 86 17 0 chr10 112242303 112242652 -28074113 - THE1A LTR MaLR 0 355 1 4271 155 30 38 chr10 112242652 112243451 -28073314 + THE1C-int LTR MaLR 378 1154 -426 2027 142 0 7 chr10 112243460 112243762 -28073003 + THE1C LTR MaLR 76 375 0 250 217 51 43 chr10 112243845 112243983 -28072782 + (TCTCTG)n Simple_repeat Simple_repeat 5 143 0 198 286 0 0 chr10 112243996 112244066 -28072699 + CT-rich Low_complexity Low_complexity 4 73 0 21 57 0 0 chr10 112244710 112244745 -28072020 + AT_rich Low_complexity Low_complexity 1 35 0 2242 99 30 0 chr10 112244948 112245251 -28071514 - AluSx SINE Alu 0 312 1 543 238 41 7 chr10 112245811 112245958 -28070807 - MIR SINE MIR -62 200 49 249 324 73 29 chr10 112246278 112246414 -28070351 + MER5B DNA MER1_type 2 143 -35 526 260 95 35 chr10 112247197 112247428 -28069337 + MIR SINE MIR 15 259 -3 366 229 57 82 chr10 112249574 112249696 -28067069 + L2 LINE L2 3149 3267 -5 188 341 22 22 chr10 112249684 112249775 -28066990 + MIR SINE MIR 172 262 0 * 217 379 40 8 chr10 112250303 112250427 -28066338 - MIR3 SINE MIR -49 159 32 419 291 121 29 chr10 112250448 112250654 -28066111 - MIR SINE MIR -3 259 35 479 289 30 19 chr10 112251219 112251436 -28065329 + MIR SINE MIR 26 245 -17 183 42 0 0 chr10 112254452 112254476 -28062289 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 309 26 0 0 chr10 112255140 112255178 -28061587 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 336 67 10 chr10 112255381 112255485 -28061280 + L2 LINE L2 3159 3268 -4 499 233 83 8 chr10 112255631 112255764 -28061001 + MIR3 SINE MIR 65 207 -1 194 255 0 20 chr10 112256838 112256889 -28059876 + L2 LINE L2 2662 2711 -603 24 0 0 0 chr10 112257212 112257236 -28059529 + AT_rich Low_complexity Low_complexity 1 24 0 278 319 53 0 chr10 112257338 112257451 -28059314 + L2 LINE L2 2570 2688 -626 242 164 18 0 chr10 112257623 112257678 -28059087 + (TA)n Simple_repeat Simple_repeat 1 56 0 353 325 98 57 chr10 112257797 112258396 -28058369 + L2 LINE L2 2677 3302 -11 377 267 136 72 chr10 112258471 112258692 -28058073 - MIR SINE MIR -27 235 1 213 244 0 0 chr10 112258710 112258755 -28058010 - MIR SINE MIR 0 262 218 210 242 0 32 chr10 112259344 112259406 -28057359 + MIR SINE MIR 128 187 -75 292 322 263 0 chr10 112260735 112260940 -28055825 + MIR SINE MIR 2 260 -2 1909 123 67 0 chr10 112261367 112261651 -28055114 - AluSx SINE Alu -9 303 1 304 335 93 22 chr10 112262339 112262521 -28054244 + L2 LINE L2 3078 3272 0 29 28 0 0 chr10 112262780 112262816 -28053949 + AT_rich Low_complexity Low_complexity 1 36 0 459 200 73 78 chr10 112262868 112263073 -28053692 - L1ME3 LINE L1 -74 6088 5885 1308 177 14 41 chr10 112263079 112263373 -28053392 + L1MA9 LINE L1 5989 6274 -38 772 285 75 35 chr10 112263386 112263842 -28052923 - L1M4 LINE L1 -975 5171 4698 2055 263 118 80 chr10 112263849 112264055 -28052710 - L1M4 LINE L1 -1499 4647 4450 2437 62 0 10 chr10 112264055 112264361 -28052404 - AluY SINE Alu -8 303 1 2055 263 118 80 chr10 112264361 112265286 -28051479 - L1M4 LINE L1 -1696 4450 3562 1974 125 7 4 chr10 112265286 112265590 -28051175 - AluSx SINE Alu 0 305 1 2055 263 118 80 chr10 112265590 112266183 -28050582 - L1M4 LINE L1 -2584 3562 2993 1683 165 10 29 chr10 112266183 112266492 -28050273 - AluJo SINE Alu -4 308 6 2055 263 118 80 chr10 112266492 112267061 -28049704 - L1M4 LINE L1 -3153 2993 2263 894 164 72 62 chr10 112267124 112267332 -28049433 - L1MD1 LINE L1 -4 6632 6423 281 68 0 119 chr10 112267340 112267399 -28049366 - L1MA7 LINE L1 -3 6288 6237 * 413 169 0 0 chr10 112267379 112267456 -28049309 + L1MA7 LINE L1 6063 6139 -152 844 154 47 0 chr10 112267471 112267640 -28049125 - L1MA4 LINE L1 -8 6292 6116 2681 93 26 3 chr10 112267645 112268032 -28048733 + L1PA11 LINE L1 5779 6174 0 4315 123 26 71 chr10 112268033 112268361 -28048404 - L1MA4A LINE L1 -175 6128 5787 1838 137 40 18 chr10 112268361 112268639 -28048126 - AluSx SINE Alu -23 289 6 4315 123 26 71 chr10 112268639 112269116 -28047649 - L1MA4A LINE L1 -516 5787 5359 575 178 42 0 chr10 112269103 112269221 -28047544 + L1MA7 LINE L1 6110 6232 -59 * 747 203 128 5 chr10 112269218 112269405 -28047360 - L1MD1 LINE L1 -200 6436 6227 1259 209 65 21 chr10 112269413 112269761 -28047004 - L1MD1 LINE L1 -715 5921 5533 1917 162 7 3 chr10 112269761 112270069 -28046696 - AluJo SINE Alu -3 309 1 1259 209 65 21 chr10 112270069 112270321 -28046444 - L1MD1 LINE L1 -1103 5533 5294 693 248 15 4 chr10 112270333 112270603 -28046162 - L1MD1 LINE L1 -2848 3692 3420 4924 115 34 95 chr10 112270605 112271604 -28045161 - Tigger3b DNA MER2_type 0 1231 294 2720 165 10 17 chr10 112271604 112272126 -28044639 + L1MA3 LINE L1 5787 6304 -1 2107 191 37 7 chr10 112272140 112272600 -28044165 + L1MB1 LINE L1 5315 5788 -380 * 8006 192 9 17 chr10 112272597 112274273 -28042492 + L1PA14 LINE L1 3068 4730 -1416 568 172 0 0 chr10 112274270 112274363 -28042402 - L1P LINE L1 -2338 3808 3716 * 5574 124 25 0 chr10 112274367 112275765 -28041000 + L1PA14 LINE L1 4734 6160 -1 2025 153 23 31 chr10 112275765 112276153 -28040612 + L1MB1 LINE L1 5769 6156 -12 3025 246 73 27 chr10 112276202 112277071 -28039694 - L1MD1 LINE L1 -4823 1717 889 2259 183 32 0 chr10 112277071 112277481 -28039284 + MSTB LTR MaLR 1 423 -3 3025 246 73 27 chr10 112277481 112278183 -28038582 - L1MD1 LINE L1 -5651 889 1 261 226 47 19 chr10 112278693 112278799 -28037966 - L1ME LINE L1 -5009 1375 1267 650 69 17 26 chr10 112278990 112279106 -28037659 + (TTTC)n Simple_repeat Simple_repeat 1 115 0 1775 169 0 0 chr10 112279106 112279385 -28037380 - AluJo SINE Alu -33 279 1 300 282 26 13 chr10 112280145 112280223 -28036542 - L1ME LINE L1 -5954 418 340 718 235 13 0 chr10 112280701 112280850 -28035915 + MER5A DNA MER1_type 38 188 -1 256 186 0 0 chr10 112280851 112280894 -28035871 - MER5A DNA MER1_type -146 43 1 204 263 140 0 chr10 112280894 112280946 -28035819 + L2 LINE L2 3203 3262 -10 575 233 200 0 chr10 112281204 112281354 -28035411 + MER5A DNA MER1_type 10 189 0 331 348 0 0 chr10 112281543 112281678 -28035087 + (TATATG)n Simple_repeat Simple_repeat 4 138 0 269 314 59 0 chr10 112282967 112283069 -28033696 + MIR3 SINE MIR 62 169 -39 302 316 1 12 chr10 112283120 112283220 -28033545 + MIR SINE MIR 44 143 -65 1880 221 50 27 chr10 112283281 112283766 -28032999 + MLT1D LTR MaLR 10 505 0 199 360 111 6 chr10 112283891 112284063 -28032702 - L3b LINE CR1 -18 1565 1376 656 222 252 4 chr10 112284323 112284553 -28032212 + LTR50 LTR ERVL 35 321 -474 301 282 24 16 chr10 112284611 112284735 -28032030 + LTR50 LTR ERVL 424 548 -247 284 252 27 27 chr10 112285683 112285794 -28030971 + MERVL LTR ERVL 811 921 -4564 2093 104 3 30 chr10 112285794 112286092 -28030673 - AluSc SINE Alu -19 290 1 1219 179 58 80 chr10 112286160 112286523 -28030242 + MLT1A1 LTR MaLR 11 365 0 2617 310 59 59 chr10 112286603 112287460 -28029305 + MERVL LTR ERVL 1160 2015 -3749 1868 164 128 13 chr10 112287460 112287844 -28028921 - MSTA LTR MaLR 0 428 1 2617 310 59 59 chr10 112287844 112288904 -28027861 + MERVL LTR ERVL 2015 3078 -2686 525 289 68 51 chr10 112289018 112289312 -28027453 + LTR50 LTR ERVL 386 684 -111 242 213 221 24 chr10 112289446 112289573 -28027192 + LTR50 LTR ERVL 643 794 -1 269 317 18 73 chr10 112291246 112291410 -28025355 + MIR SINE MIR 108 262 0 1574 155 56 0 chr10 112291477 112291728 -28025037 - AluJb SINE Alu -47 265 1 695 274 99 0 chr10 112291889 112292112 -28024653 + L1MC4 LINE L1 6356 6600 -1442 3046 166 7 29 chr10 112292146 112292706 -28024059 + MER44D DNA MER2_type 3 605 0 949 299 26 26 chr10 112293249 112293633 -28023132 + L1MC4 LINE L1 7377 7760 -282 4711 124 7 7 chr10 112293640 112294391 -28022374 + L1PA10 LINE L1 5402 6152 -16 779 248 28 24 chr10 112294397 112294687 -28022078 + L1MC4 LINE L1 7747 8037 -5 2403 86 3 0 chr10 112295148 112295452 -28021313 - AluSp SINE Alu -8 305 1 584 197 43 75 chr10 112295479 112295667 -28021098 + MIR SINE MIR 59 240 -22 632 321 90 67 chr10 112297523 112298111 -28018654 + L2 LINE L2 2686 3272 0 34 24 0 0 chr10 112298432 112298473 -28018292 + AT_rich Low_complexity Low_complexity 1 41 0 225 94 0 0 chr10 112299112 112299144 -28017621 + (T)n Simple_repeat Simple_repeat 1 32 0 1250 193 29 30 chr10 112299211 112299647 -28017118 + MLT1D LTR MaLR 1 505 0 294 73 0 0 chr10 112300024 112300065 -28016700 + (GA)n Simple_repeat Simple_repeat 1 41 0 7149 211 137 67 chr10 112300220 112302806 -28013959 - L1PA13 LINE L1 -1526 5271 2475 1955 148 26 13 chr10 112302806 112303111 -28013654 + AluSx SINE Alu 1 309 -3 7149 211 137 67 chr10 112303111 112303306 -28013459 - L1PA13 LINE L1 -4322 2475 2295 3888 210 20 6 chr10 112303307 112304202 -28012563 - L1PA13 LINE L1 -4611 2176 1269 2849 263 11 44 chr10 112304311 112305169 -28011596 - L1PA13 LINE L1 -5958 829 1 206 228 127 13 chr10 112305918 112305997 -28010768 - MIR SINE MIR -84 124 37 185 128 0 26 chr10 112306452 112306491 -28010274 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 225 345 97 35 chr10 112307105 112307218 -28009547 - L2 LINE L2 -10 3262 3143 1694 156 6 55 chr10 112307971 112308299 -28008466 + AluSx SINE Alu 1 312 0 440 290 48 20 chr10 112308326 112308578 -28008187 + L1ME3A LINE L1 4886 5144 -1002 709 329 43 3 chr10 112308587 112308909 -28007856 + LTR16A LTR ERVL 7 341 -109 1719 260 71 56 chr10 112308995 112309090 -28007675 + L1ME3A LINE L1 5139 5231 -939 1725 174 3 23 chr10 112309090 112309389 -28007376 + AluJo SINE Alu 1 293 -19 1719 260 71 56 chr10 112309389 112310307 -28006458 + L1ME3A LINE L1 5231 6162 -8 369 0 0 0 chr10 112310327 112310368 -28006397 + (TC)n Simple_repeat Simple_repeat 1 41 0 252 192 19 0 chr10 112310417 112310469 -28006296 - MER5B DNA MER1_type -123 55 3 1377 272 28 49 chr10 112311082 112311836 -28004929 - L1MC4 LINE L1 -239 7803 7066 370 119 0 15 chr10 112311841 112311908 -28004857 - THE1C LTR MaLR -2 426 361 1082 196 59 36 chr10 112312021 112312327 -28004438 - THE1C LTR MaLR -62 313 1 331 258 47 23 chr10 112312389 112312517 -28004248 - L1MC4a LINE L1 -933 6875 6745 2027 145 33 38 chr10 112313513 112313878 -28002887 - THE1B LTR MaLR -1 363 1 10680 92 4 39 chr10 112313878 112315515 -28001250 - THE1B-int LTR MaLR 0 1580 1 1860 162 36 38 chr10 112315515 112315880 -28000885 - THE1B LTR MaLR 0 364 1 204 231 19 0 chr10 112317422 112317474 -27999291 + CT-rich Low_complexity Low_complexity 1 53 0 418 298 29 23 chr10 112318477 112318648 -27998117 + LTR16A1 LTR ERVL 286 457 0 624 280 109 18 chr10 112318649 112318924 -27997841 + HERV16 LTR ERVL 2 301 -4695 396 359 73 50 chr10 112319077 112319654 -27997111 + HERV16 LTR ERVL 478 1067 -3929 7420 41 1 0 chr10 112319789 112321275 -27995490 + L1PA5 LINE L1 4663 6148 -6 1063 195 27 4 chr10 112321283 112321544 -27995221 + L1MA8 LINE L1 6025 6291 0 554 257 39 98 chr10 112322055 112322362 -27994403 + LTR16A1 LTR ERVL 169 457 0 215 241 17 0 chr10 112322626 112322684 -27994081 + GA-rich Low_complexity Low_complexity 2 60 0 866 226 31 13 chr10 112323491 112323717 -27993048 - MER96B DNA MER1_type? -182 235 6 1014 283 47 15 chr10 112323856 112324199 -27992566 + LTR16A LTR ERVL 97 450 0 2129 121 0 7 chr10 112324442 112324739 -27992026 + AluSg SINE Alu 16 310 0 779 304 35 29 chr10 112324759 112325104 -27991661 + HERV16 LTR ERVL 310 656 -4340 2164 156 28 11 chr10 112325157 112325515 -27991250 + THE1B LTR MaLR 1 364 0 719 298 36 11 chr10 112325526 112326034 -27990731 + HERV16 LTR ERVL 748 1339 -3657 * 1239 315 57 27 chr10 112326001 112326939 -27989826 + HERV16 LTR ERVL 2646 3053 -1943 1064 330 46 52 chr10 112326976 112328029 -27988736 + HERV16 LTR ERVL 4064 5109 -655 911 130 0 0 chr10 112328201 112328332 -27988433 + FLAM_C SINE Alu 1 131 -2 562 321 21 10 chr10 112328693 112328886 -27987879 + LTR16A LTR ERVL 193 387 -63 23 33 0 0 chr10 112329507 112329537 -27987228 + AT_rich Low_complexity Low_complexity 1 30 0 430 259 32 25 chr10 112330847 112331010 -27985755 + MIR SINE MIR 38 195 -63 213 94 0 0 chr10 112331055 112331087 -27985678 + (TAA)n Simple_repeat Simple_repeat 1 32 0 654 161 148 26 chr10 112331277 112331432 -27985333 - MER58A DNA MER1_type -5 219 46 646 287 118 11 chr10 112332186 112332566 -27984199 + L1ME3 LINE L1 5740 6160 -2 413 203 29 29 chr10 112332737 112332875 -27983890 - L1ME LINE L1 -397 5765 5628 197 196 0 43 chr10 112332880 112332926 -27983839 + L2 LINE L2 3269 3312 -1 22 35 0 0 chr10 112333535 112333564 -27983201 + AT_rich Low_complexity Low_complexity 1 29 0 2388 89 0 10 chr10 112333767 112334081 -27982684 - AluY SINE Alu 0 311 1 21 0 0 0 chr10 112334807 112334828 -27981937 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 112335360 112335403 -27981362 + AT_rich Low_complexity Low_complexity 1 43 0 273 240 40 0 chr10 112335483 112335558 -27981207 + (TA)n Simple_repeat Simple_repeat 1 78 0 720 260 41 47 chr10 112335627 112335966 -27980799 - L1ME3A LINE L1 -102 6068 5732 1907 187 66 42 chr10 112336084 112336586 -27980179 - MER67D LTR ERV1 0 514 1 204 277 0 0 chr10 112337573 112337620 -27979145 + (TG)n Simple_repeat Simple_repeat 2 48 0 4610 122 17 33 chr10 112337668 112338449 -27978316 + MER4E LTR ERV1 1 768 -11 305 342 68 5 chr10 112339567 112339757 -27977008 - MIR SINE MIR -9 253 52 304 272 0 0 chr10 112339866 112339947 -27976818 + L2 LINE L2 3231 3311 -2 2303 104 0 0 chr10 112340119 112340427 -27976338 - AluSg SINE Alu -2 308 1 353 249 128 27 chr10 112340539 112340876 -27975889 + L1M4 LINE L1 2980 3350 -2796 3166 278 25 8 chr10 112340885 112341710 -27975055 + L1M4 LINE L1 6 844 -6015 958 234 104 0 chr10 112341694 112342031 -27974734 + L1M4 LINE L1 1678 2049 -4910 * 2986 263 27 8 chr10 112342042 112343110 -27973655 + L1M4 LINE L1 4410 5498 -1459 * 3865 88 26 10 chr10 112343105 112343708 -27973057 + L1PB1 LINE L1 2232 2844 -4114 12724 178 21 26 chr10 112343747 112347629 -27969136 + L1PB1 LINE L1 3096 6958 -4 592 96 53 0 chr10 112347629 112347723 -27969042 - Tigger1 DNA MER2_type -105 2313 2215 237 33 0 0 chr10 112347723 112347753 -27969012 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3568 261 54 30 chr10 112347763 112349054 -27967711 + L1M4 LINE L1 3528 4864 -1282 243 0 0 0 chr10 112349054 112349081 -27967684 + (TG)n Simple_repeat Simple_repeat 2 28 0 3568 261 54 30 chr10 112349081 112349372 -27967393 + L1M4 LINE L1 4864 5147 -999 1994 108 10 51 chr10 112349389 112349703 -27967062 + AluSx SINE Alu 1 301 -11 2256 81 0 0 chr10 112349711 112349994 -27966771 + AluY SINE Alu 16 298 -13 359 326 54 0 chr10 112350442 112350571 -27966194 - MIR SINE MIR -9 253 118 264 122 0 0 chr10 112352102 112352143 -27964622 + (GAAAA)n Simple_repeat Simple_repeat 4 44 0 367 239 54 0 chr10 112352424 112352516 -27964249 + LTR16A LTR ERVL 276 372 -78 278 303 26 39 chr10 112352641 112352796 -27963969 - L1MEc LINE L1 -4680 1883 1731 387 308 179 42 chr10 112352857 112353674 -27963091 - L1MEc LINE L1 -4756 1626 754 1771 178 36 3 chr10 112354199 112354531 -27962234 - MER2 DNA MER2_type 0 344 2 2304 105 0 3 chr10 112354797 112355111 -27961654 - AluSq SINE Alu 0 313 1 241 303 37 46 chr10 112356851 112356960 -27959805 + MIR SINE MIR 85 192 -70 185 0 40 0 chr10 112357019 112357044 -27959721 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1568 219 62 7 chr10 112358030 112358376 -27958389 - MLT1A1 LTR MaLR 0 365 1 268 261 6 171 chr10 112358511 112358687 -27958078 + MIR SINE MIR 45 191 -71 1762 233 66 27 chr10 112358708 112359194 -27957571 - MLT1D LTR MaLR 0 505 1 1002 221 68 57 chr10 112359441 112359728 -27957037 - MER76 LTR ERV -42 646 364 3821 173 18 17 chr10 112359728 112360510 -27956255 - L1MA7 LINE L1 0 6291 5509 1002 221 68 57 chr10 112360510 112360806 -27955959 - MER76 LTR ERV -324 364 6 2349 91 83 11 chr10 112362392 112362742 -27954023 - MER51B LTR ERV1 0 377 3 270 349 97 29 chr10 112362797 112363309 -27953456 + L2 LINE L2 2767 3305 -8 781 246 58 0 chr10 112363744 112363935 -27952830 - MER63A DNA MER1_type 0 210 9 189 107 0 0 chr10 112365057 112365085 -27951680 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 380 300 138 0 chr10 112365572 112365702 -27951063 + MIR3 SINE MIR 50 197 -11 526 265 106 7 chr10 112365932 112366083 -27950682 - MIR SINE MIR -25 237 72 215 0 67 0 chr10 112366658 112366688 -27950077 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 4508 117 6 1 chr10 112368398 112369093 -27947672 - L1PA7 LINE L1 -2180 3966 3269 10066 90 11 12 chr10 112369094 112371274 -27945491 + L1PA7 LINE L1 3956 6136 -18 189 281 0 53 chr10 112372211 112372268 -27944497 + MIR3 SINE MIR 6 59 -149 567 0 0 0 chr10 112372914 112372977 -27943788 + (CATTC)n Simple_repeat Simple_repeat 4 66 0 334 242 33 0 chr10 112373048 112373168 -27943597 + MER69 DNA AcHobo 2396 2519 -7 10989 167 76 10 chr10 112373441 112376878 -27939887 - L1MA2 LINE L1 0 7723 4045 * 14153 177 43 15 chr10 112376875 112377076 -27939689 - L1MA2 LINE L1 -4821 2744 2550 2091 108 7 0 chr10 112377076 112377354 -27939411 - AluSx SINE Alu -22 290 11 14153 177 43 15 chr10 112377354 112379805 -27936960 - L1MA2 LINE L1 -5015 2550 17 2669 212 26 36 chr10 112381100 112381730 -27935035 - L1 LINE L1 -2480 3666 3046 1517 212 3 0 chr10 112381730 112382018 -27934747 - AluJo SINE Alu -1 311 23 2669 212 26 36 chr10 112382018 112382264 -27934501 - L1 LINE L1 -3100 3046 2799 * 4183 201 25 32 chr10 112382259 112382474 -27934291 + L1MA9 LINE L1 4994 5209 -1103 5150 147 12 6 chr10 112382474 112383689 -27933076 + L1PA16 LINE L1 4927 6150 -16 4183 201 25 32 chr10 112383689 112384763 -27932002 + L1MA9 LINE L1 5209 6274 -38 878 96 0 5 chr10 112384856 112384998 -27931767 + L1P4 LINE L1 5317 5452 -709 429 283 44 100 chr10 112385676 112386245 -27930520 + HAL1b LINE L1 65 601 -747 401 0 20 0 chr10 112386366 112386415 -27930350 + (TG)n Simple_repeat Simple_repeat 1 50 0 2036 174 72 13 chr10 112386997 112387388 -27929377 - MLT2D LTR ERVL 0 414 1 232 346 67 48 chr10 112387521 112387790 -27928975 + L2 LINE L2 858 1131 -2183 1038 296 74 37 chr10 112387792 112388306 -27928459 + L2 LINE L2 2216 2748 -566 465 246 96 53 chr10 112388312 112388647 -27928118 + L1MD2 LINE L1 5523 5842 -517 1077 252 81 23 chr10 112388647 112389040 -27927725 + LTR52 LTR ERVL 4 419 -2 465 246 96 53 chr10 112389040 112389268 -27927497 + L1MD2 LINE L1 5842 6059 -300 195 42 0 0 chr10 112389268 112389292 -27927473 + (CA)n Simple_repeat Simple_repeat 2 25 0 465 246 96 53 chr10 112389292 112389489 -27927276 + L1MD2 LINE L1 6059 6345 -14 447 341 54 17 chr10 112389508 112389757 -27927008 + L2 LINE L2 2736 2992 -321 266 356 10 0 chr10 112389943 112390047 -27926718 - L2 LINE L2 -260 3053 2949 1217 89 169 46 chr10 112390049 112390286 -27926479 + L1PA11 LINE L1 5909 6174 0 821 148 17 6 chr10 112390298 112390474 -27926291 + GA-rich Low_complexity Low_complexity 1 178 0 2514 74 0 0 chr10 112391646 112391957 -27924808 + AluY SINE Alu 1 311 0 655 365 91 19 chr10 112393204 112393795 -27922970 + L2 LINE L2 2684 3312 -1 315 293 122 31 chr10 112394028 112394250 -27922515 - MIR SINE MIR 0 262 21 212 324 0 0 chr10 112394724 112394792 -27921973 + A-rich Low_complexity Low_complexity 1 68 0 742 262 60 24 chr10 112394817 112395065 -27921700 - MIR SINE MIR -1 261 5 1600 168 20 107 chr10 112396533 112396925 -27919840 + MLT1A1 LTR MaLR 8 365 0 208 302 0 16 chr10 112397602 112397665 -27919100 - MIR SINE MIR -114 94 33 340 160 11 96 chr10 112397729 112397823 -27918942 - L2 LINE L2 -18 3295 3210 220 390 160 6 chr10 112397857 112398188 -27918577 - L2 LINE L2 -542 2772 2391 22 0 0 0 chr10 112398728 112398750 -27918015 + AT_rich Low_complexity Low_complexity 1 22 0 2005 130 21 0 chr10 112398757 112399041 -27917724 + AluSx SINE Alu 1 290 -22 508 14 14 14 chr10 112399042 112399112 -27917653 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 231 36 0 0 chr10 112399112 112399140 -27917625 + (GA)n Simple_repeat Simple_repeat 1 28 0 217 320 100 0 chr10 112399708 112399808 -27916957 + MIR SINE MIR 79 188 -74 293 186 14 0 chr10 112400655 112400725 -27916040 + (CA)n Simple_repeat Simple_repeat 1 71 0 29 0 0 0 chr10 112400918 112400947 -27915818 + AT_rich Low_complexity Low_complexity 1 29 0 202 339 41 94 chr10 112401012 112401105 -27915660 + L2 LINE L2 2893 2974 -339 1896 127 9 43 chr10 112401105 112401428 -27915337 + AluSx SINE Alu 1 312 0 202 339 41 94 chr10 112401428 112401505 -27915260 + L2 LINE L2 2974 3054 -259 462 240 66 16 chr10 112401552 112401673 -27915092 + L2 LINE L2 3142 3268 -4 305 324 115 0 chr10 112402025 112402173 -27914592 + MIR SINE MIR 98 262 0 213 275 0 0 chr10 112402455 112402495 -27914270 - MER91 DNA MER1_type -19 177 138 28 0 0 0 chr10 112403473 112403501 -27913264 + AT_rich Low_complexity Low_complexity 1 28 0 372 310 41 78 chr10 112403690 112403935 -27912830 + MLT1J2 LTR MaLR 189 424 -26 357 254 27 135 chr10 112404093 112404278 -27912487 - MER5B DNA MER1_type -8 170 6 3857 112 22 2 chr10 112404558 112405105 -27911660 + L1PA13 LINE L1 5605 6162 -1 1800 74 0 0 chr10 112405612 112405828 -27910937 - AluSc SINE Alu -10 299 84 792 252 167 31 chr10 112405862 112406311 -27910454 + HAL1b LINE L1 256 765 -583 327 238 175 21 chr10 112406564 112406753 -27910012 + HAL1b LINE L1 1064 1281 -67 229 280 130 42 chr10 112407144 112407405 -27909360 - L1ME LINE L1 -341 5821 5538 416 316 58 49 chr10 112407912 112408137 -27908628 - Charlie8 DNA MER1_type -2151 266 40 288 250 94 21 chr10 112409012 112409108 -27907657 - MIR SINE MIR -64 144 42 726 345 70 33 chr10 112409231 112409628 -27907137 - LTR16C LTR ERVL -7 484 73 673 323 34 26 chr10 112409826 112410244 -27906521 - ERVL LTR ERVL -441 5323 4903 1205 81 0 25 chr10 112410251 112410412 -27906353 - AluSc SINE Alu -10 299 143 1355 288 112 10 chr10 112410895 112411659 -27905106 - L1ME3 LINE L1 -37 6194 5325 213 219 0 0 chr10 112411849 112411890 -27904875 + CT-rich Low_complexity Low_complexity 1 41 0 372 260 39 66 chr10 112411892 112412073 -27904692 - L1ME3 LINE L1 -2885 3330 3155 750 122 23 23 chr10 112412223 112412354 -27904411 + Tigger1 DNA MER2_type 1399 1529 -889 346 231 0 0 chr10 112412354 112412432 -27904333 + Tigger1 DNA MER2_type 2163 2240 -178 5823 132 13 3 chr10 112412436 112413310 -27903455 + Tigger1 DNA MER2_type 1537 2418 0 1279 245 57 28 chr10 112413342 112413836 -27902929 - L1M4 LINE L1 -1315 4831 4324 230 234 117 35 chr10 112413855 112414000 -27902765 - L1ME3 LINE L1 -4893 1503 1347 290 292 152 44 chr10 112414047 112414572 -27902193 - L1ME3 LINE L1 -4902 1357 792 24 0 0 0 chr10 112416018 112416042 -27900723 + AT_rich Low_complexity Low_complexity 1 24 0 2445 62 0 0 chr10 112416048 112416337 -27900428 + AluY SINE Alu 1 289 -22 26 0 0 0 chr10 112416812 112416838 -27899927 + AT_rich Low_complexity Low_complexity 1 26 0 2098 123 13 0 chr10 112417145 112417446 -27899319 + AluSx SINE Alu 1 305 -7 336 245 112 0 chr10 112417506 112417604 -27899161 + MIR SINE MIR 119 227 -35 520 145 12 0 chr10 112418545 112418628 -27898137 + AluS SINE Alu 2 85 -228 13394 67 5 0 chr10 112418734 112420982 -27895783 - L1PA6 LINE L1 -206 5948 3690 2161 94 0 24 chr10 112421065 112421388 -27895377 - AluSg SINE Alu 0 316 1 906 112 0 30 chr10 112421477 112421611 -27895154 + AluJo SINE Alu 9 138 -174 311 164 194 0 chr10 112421938 112422005 -27894760 - L2 LINE L2 0 3272 3193 474 184 0 23 chr10 112422105 112422192 -27894573 + AluSg/x SINE Alu 209 293 -19 226 132 0 26 chr10 112423473 112423511 -27893254 + MIR SINE MIR 115 151 -57 526 179 192 86 chr10 112424301 112424535 -27892230 - MER112 DNA MER1_type -1 259 1 2050 141 0 3 chr10 112425966 112426272 -27890493 - AluSx SINE Alu -7 305 1 359 242 89 8 chr10 112426290 112426414 -27890351 - LTR33 LTR ERVL -62 459 326 1973 193 21 21 chr10 112426845 112427219 -27889546 + MLT1A2 LTR MaLR 1 374 0 516 289 61 11 chr10 112427261 112427441 -27889324 - MIR SINE MIR -8 254 66 1481 191 13 27 chr10 112427857 112428156 -27888609 - AluJb SINE Alu -17 295 1 180 222 256 22 chr10 112428818 112428908 -27887857 - L3b LINE CR1 -254 1329 1219 194 61 0 30 chr10 112429039 112429072 -27887693 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2321 117 0 0 chr10 112429086 112429395 -27887370 - AluSx SINE Alu -3 309 1 1161 212 0 0 chr10 112430293 112430515 -27886250 + AluJo SINE Alu 1 222 -90 920 127 0 0 chr10 112430699 112430825 -27885940 - FLAM_C SINE Alu -17 126 1 1545 208 28 11 chr10 112430841 112431125 -27885640 - AluJb SINE Alu -11 291 3 282 293 191 9 chr10 112431409 112431547 -27885218 - MIR SINE MIR -58 150 14 458 273 146 12 chr10 112431547 112431712 -27885053 + MIR SINE MIR 3 189 -73 239 118 0 0 chr10 112431779 112431813 -27884952 + MIR SINE MIR 217 250 -12 974 92 0 0 chr10 112431968 112432087 -27884678 + FLAM_C SINE Alu 1 119 -14 31 26 0 0 chr10 112432088 112432126 -27884639 + AT_rich Low_complexity Low_complexity 1 38 0 243 244 0 0 chr10 112432908 112432953 -27883812 + polypyrimidine Low_complexity Low_complexity 3 47 0 491 202 44 53 chr10 112433461 112433575 -27883190 + L2 LINE L2 3196 3308 -5 953 225 81 51 chr10 112434903 112435236 -27881529 - L1MC4 LINE L1 -1 8041 7699 534 285 47 12 chr10 112435229 112435482 -27881283 - L1MEc LINE L1 -4153 2969 2708 * 2181 97 7 3 chr10 112435614 112435904 -27880861 + AluSc SINE Alu 6 296 -13 1993 203 75 29 chr10 112437351 112437830 -27878935 - MLT1D LTR MaLR -4 501 1 24 0 0 0 chr10 112440427 112440451 -27876314 + GC_rich Low_complexity Low_complexity 1 24 0 271 298 221 0 chr10 112441417 112441575 -27875190 - MIR SINE MIR -22 240 48 353 250 9 45 chr10 112442103 112442215 -27874550 + L1MC5 LINE L1 7676 7783 -178 678 170 105 29 chr10 112442317 112442488 -27874277 - MLT1E LTR MaLR 0 593 410 369 241 123 45 chr10 112442595 112442815 -27873950 - L1MEc LINE L1 -6149 274 38 262 274 66 9 chr10 112442830 112442936 -27873829 - L1ME LINE L1 -292 5874 5763 279 0 0 0 chr10 112443608 112443639 -27873126 + (TG)n Simple_repeat Simple_repeat 2 32 0 2232 94 3 19 chr10 112443836 112444143 -27872622 - AluSp SINE Alu -11 302 1 960 285 76 66 chr10 112445241 112445757 -27871008 + MLT1G1 LTR MaLR 73 593 -2 1119 194 0 24 chr10 112446122 112446333 -27870432 - AluJo SINE Alu -7 305 100 2398 64 0 0 chr10 112446473 112446770 -27869995 + AluY SINE Alu 12 308 -3 750 241 82 29 chr10 112447067 112447312 -27869453 - L1MC4 LINE L1 -303 7739 7482 1380 190 4 8 chr10 112448132 112448374 -27868391 - AluJo SINE Alu -30 282 42 799 226 28 0 chr10 112449049 112449230 -27867535 - L1MC4 LINE L1 -556 7486 7301 1102 131 0 44 chr10 112449246 112449429 -27867336 + AluJb SINE Alu 1 175 -137 2132 189 172 36 chr10 112450079 112450407 -27866358 + Charlie1a DNA MER1_type 1 283 -2478 2527 55 3 3 chr10 112450407 112450716 -27866049 + AluY SINE Alu 1 309 -2 2132 189 172 36 chr10 112450716 112450969 -27865796 + Charlie1a DNA MER1_type 283 661 -794 2071 112 0 0 chr10 112450971 112451247 -27865518 + AluSx SINE Alu 28 303 -9 894 166 141 4 chr10 112451253 112451494 -27865271 + Charlie1a DNA MER1_type 1182 1455 0 445 200 136 32 chr10 112451706 112451861 -27864904 - MIR SINE MIR -1 261 91 1441 210 43 0 chr10 112453193 112453469 -27863296 + AluJb SINE Alu 4 291 -21 25 0 0 0 chr10 112453581 112453606 -27863159 + AT_rich Low_complexity Low_complexity 1 25 0 1045 251 104 25 chr10 112453784 112454187 -27862578 - L2 LINE L2 -707 2607 2173 2030 107 0 83 chr10 112454745 112455072 -27861693 + AluSx SINE Alu 1 300 -12 1813 167 0 3 chr10 112455134 112455428 -27861337 + AluJo SINE Alu 1 293 -19 375 224 42 91 chr10 112455803 112455946 -27860819 - L1MC/D LINE L1 -2005 5803 5668 250 167 21 0 chr10 112455971 112456019 -27860746 - L1MC/D LINE L1 -799 5534 5486 746 119 9 0 chr10 112456078 112456187 -27860578 - MLT1A2 LTR MaLR 0 374 265 314 331 41 0 chr10 112456234 112456355 -27860410 + L1MDa LINE L1 2343 2468 -4072 767 255 31 15 chr10 112456434 112456693 -27860072 + L1MDa LINE L1 2504 2766 -3774 1502 174 16 49 chr10 112456725 112457030 -27859735 + AluJo SINE Alu 1 295 -17 2220 91 19 19 chr10 112457971 112458278 -27858487 - AluY SINE Alu -4 307 1 367 227 80 0 chr10 112458294 112458382 -27858383 - MIR SINE MIR -121 141 47 192 291 102 39 chr10 112458432 112458559 -27858206 - L2 LINE L2 0 3272 3138 448 308 110 11 chr10 112459681 112459954 -27856811 - MLT1E LTR MaLR -293 300 1 1161 208 4 29 chr10 112460271 112460516 -27856249 - MER8 DNA MER2_type 0 239 1 339 224 137 87 chr10 112460548 112460767 -27855998 - L2 LINE L2 0 3313 3084 229 279 29 39 chr10 112460789 112460893 -27855872 - L2 LINE L2 -360 2954 2852 2301 168 13 0 chr10 112461210 112461608 -27855157 + MER57A LTR ERV1 1 403 0 681 283 25 25 chr10 112461789 112461987 -27854778 - MIR SINE MIR -32 230 33 733 233 14 46 chr10 112462237 112462394 -27854371 - LTR16C LTR ERVL -36 455 305 3343 117 19 26 chr10 112462394 112462925 -27853840 - MER1A DNA MER1_type 0 527 1 733 233 14 46 chr10 112462925 112462986 -27853779 - LTR16C LTR ERVL -186 305 244 546 291 123 26 chr10 112463550 112463966 -27852799 - L1ME4a LINE L1 -104 6017 5562 244 197 26 77 chr10 112464044 112464161 -27852604 - L1ME4a LINE L1 -900 5403 5293 233 253 96 12 chr10 112464273 112464356 -27852409 - MLT1L LTR MaLR -4 611 522 239 257 250 20 chr10 112464463 112464615 -27852150 - MLT1J LTR MaLR -214 297 111 1925 128 11 4 chr10 112465108 112465411 -27851354 + AluSq SINE Alu 1 305 0 2177 103 3 13 chr10 112465513 112465815 -27850950 + AluSg SINE Alu 1 299 -11 182 219 16 78 chr10 112465835 112465899 -27850866 - MIR SINE MIR -130 78 19 433 273 5 143 chr10 112466594 112466803 -27849962 - MER91A DNA MER1_type 0 196 17 4840 53 0 5 chr10 112466975 112467594 -27849171 + L1PA3 LINE L1 5540 6155 0 320 292 81 24 chr10 112467640 112467849 -27848916 - L1 LINE L1 -1881 4265 4045 1491 253 29 60 chr10 112467886 112468658 -27848107 - L1ME1 LINE L1 -224 5942 5147 294 29 0 0 chr10 112468658 112468693 -27848072 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 1843 112 40 22 chr10 112468693 112468971 -27847794 - AluSq SINE Alu -30 283 1 1491 253 29 60 chr10 112468971 112469013 -27847752 - L1ME1 LINE L1 -968 5198 5156 413 239 53 16 chr10 112469039 112469282 -27847483 - L1ME1 LINE L1 -3679 2467 2216 22 0 0 0 chr10 112469376 112469398 -27847367 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr10 112469778 112469818 -27846947 + AT_rich Low_complexity Low_complexity 1 40 0 457 312 28 25 chr10 112469820 112470173 -27846592 + L1ME3A LINE L1 3350 3703 -2443 374 310 19 19 chr10 112470171 112470387 -27846378 + L1ME3A LINE L1 4117 4332 -1814 * 839 180 21 95 chr10 112470461 112470603 -27846162 - L1MC3 LINE L1 -2 7783 7671 2295 87 3 6 chr10 112470603 112470915 -27845850 - AluY SINE Alu 0 311 1 839 180 21 95 chr10 112470915 112471056 -27845709 - L1MC3 LINE L1 -114 7671 7521 1147 213 24 8 chr10 112471175 112471428 -27845337 - L1PB4 LINE L1 -18 6138 5882 2404 195 13 19 chr10 112471428 112471899 -27844866 - L1MC3 LINE L1 -283 7502 7035 31 36 0 18 chr10 112472109 112472146 -27844619 + AT_rich Low_complexity Low_complexity 1 38 -17 2015 125 14 7 chr10 112472146 112472433 -27844332 - AluSp SINE Alu -24 289 1 31 36 0 18 chr10 112472433 112472451 -27844314 + AT_rich Low_complexity Low_complexity 38 55 0 5489 177 25 64 chr10 112472454 112473430 -27843335 - L1MA4 LINE L1 -27 7692 6680 847 29 0 0 chr10 112473430 112473533 -27843232 - L1PA2 LINE L1 -3 6152 6050 5489 177 25 64 chr10 112473533 112473556 -27843209 - L1MA4 LINE L1 -1039 6680 6658 2302 103 0 0 chr10 112473556 112473856 -27842909 - AluSx SINE Alu -7 305 6 5489 177 25 64 chr10 112473856 112476298 -27840467 - L1MA4 LINE L1 -1061 6658 4114 * 9886 177 70 24 chr10 112476266 112478251 -27838514 - L1MA4 LINE L1 -5470 2095 20 1610 270 73 25 chr10 112478258 112479315 -27837450 + L1ME3A LINE L1 4895 6006 -164 415 333 16 8 chr10 112480658 112480784 -27835981 + MIR SINE MIR 9 135 -127 1917 181 49 22 chr10 112480784 112481149 -27835616 - MLT2B3 LTR ERVL -177 377 3 2243 105 3 7 chr10 112481316 112481611 -27835154 + AluSx SINE Alu 1 294 -18 527 331 79 45 chr10 112482162 112482679 -27834086 + L1MB3 LINE L1 4456 4990 -1156 454 201 105 87 chr10 112482893 112483112 -27833653 + L1MC4a LINE L1 5257 5479 -2329 691 292 161 21 chr10 112483120 112483548 -27833217 + L1MC4a LINE L1 5562 6049 -1759 4626 170 29 41 chr10 112483801 112485206 -27831559 - L1PB4 LINE L1 0 6156 4770 2238 75 33 26 chr10 112485206 112485511 -27831254 - AluY SINE Alu -2 309 3 4626 170 29 41 chr10 112485511 112485968 -27830797 - L1PB4 LINE L1 -1386 4770 4309 252 143 0 0 chr10 112485968 112486003 -27830762 + 5S rRNA rRNA 1 35 -86 875 108 36 0 chr10 112486009 112486148 -27830617 - L1PA13 LINE L1 -2 6161 6018 2541 215 64 3 chr10 112486746 112487384 -27829381 - L1 LINE L1 -1594 4552 3876 4455 171 29 35 chr10 112487400 112487960 -27828805 + L1MB3 LINE L1 5190 5751 -432 197 32 0 32 chr10 112487960 112487991 -27828774 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2170 34 49 0 chr10 112487993 112488258 -27828507 - AluY SINE Alu -33 278 1 4455 171 29 35 chr10 112488258 112488697 -27828068 + L1MB3 LINE L1 5752 6183 0 231 319 31 61 chr10 112490567 112490730 -27826035 - MLT1L LTR MaLR -252 363 206 1211 278 56 48 chr10 112490790 112491660 -27825105 + L1MEc LINE L1 761 1637 -4759 548 251 91 68 chr10 112491810 112492248 -27824517 + L1M4 LINE L1 3604 4051 -2095 2486 237 88 41 chr10 112492270 112492363 -27824402 + L1M4 LINE L1 4121 4208 -1938 1574 189 3 18 chr10 112492363 112492695 -27824070 + AluJb SINE Alu 1 328 0 2486 237 88 41 chr10 112492695 112493049 -27823716 + L1M4 LINE L1 4208 4544 -1602 2531 62 0 0 chr10 112493049 112493357 -27823408 + AluY SINE Alu 2 309 -2 2486 237 88 41 chr10 112493357 112494009 -27822756 + L1M4 LINE L1 4544 5275 -871 665 164 8 8 chr10 112494026 112494154 -27822611 - L1MA4A LINE L1 -14 6289 6162 1863 202 32 22 chr10 112494169 112494663 -27822102 - L1 LINE L1 -2978 3168 2670 * 2668 242 4 11 chr10 112494662 112495219 -27821546 + L1M2 LINE L1 911 1463 -5386 2021 133 70 17 chr10 112495576 112495921 -27820844 - THE1B LTR MaLR -1 363 1 1475 243 70 11 chr10 112497297 112497738 -27819027 - MLT1C LTR MaLR 0 467 1 613 309 39 35 chr10 112498433 112498718 -27818047 + LTR16A1 LTR ERVL 172 457 0 1371 176 33 72 chr10 112498719 112499025 -27817740 - AluJb SINE Alu -16 296 3 883 341 70 19 chr10 112499045 112499634 -27817131 + HERV16 LTR ERVL 37 655 -4341 976 351 65 42 chr10 112499884 112500675 -27816090 + HERV16 LTR ERVL 982 1790 -3206 962 275 29 11 chr10 112500887 112501229 -27815536 + MLT2D LTR ERVL 19 464 0 1333 350 71 43 chr10 112501486 112501837 -27814928 + HERV16 LTR ERVL 2090 2430 -3334 432 0 0 0 chr10 112501837 112501885 -27814880 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1333 350 71 43 chr10 112501885 112502267 -27814498 + HERV16 LTR ERVL 2430 2800 -2964 572 223 0 54 chr10 112502267 112502397 -27814368 - FLAM_A SINE Alu -10 123 1 1333 350 71 43 chr10 112502397 112502887 -27813878 + HERV16 LTR ERVL 2800 3275 -2489 1797 152 55 22 chr10 112502887 112503249 -27813516 + THE1C LTR MaLR 1 374 -1 1333 350 71 43 chr10 112503249 112503894 -27812871 + HERV16 LTR ERVL 3275 4061 -1703 2033 178 24 11 chr10 112504132 112504508 -27812257 - MER66B LTR ERV1 0 486 106 804 204 78 0 chr10 112506739 112506921 -27809844 - L1 LINE L1 -1695 4451 4246 249 33 0 0 chr10 112506921 112506951 -27809814 + (TG)n Simple_repeat Simple_repeat 1 30 0 804 204 78 0 chr10 112506951 112506998 -27809767 - L1 LINE L1 -1900 4246 4204 1396 321 50 14 chr10 112507017 112507718 -27809047 + ERVL LTR ERVL 1881 2585 -3069 989 319 9 33 chr10 112507917 112508246 -27808519 - MLT2E LTR ERVL -307 321 1 324 336 58 0 chr10 112508266 112508492 -27808273 - L1 LINE L1 -3568 2578 2340 781 252 128 50 chr10 112508522 112508843 -27807922 + MLT2E LTR ERVL 283 628 0 309 51 0 0 chr10 112508889 112508928 -27807837 + (TG)n Simple_repeat Simple_repeat 2 40 0 892 292 98 9 chr10 112509070 112509704 -27807061 + L1ME3A LINE L1 3887 4576 -1570 1887 151 12 0 chr10 112509730 112510054 -27806711 - L1MA4 LINE L1 -127 6173 5846 608 178 0 8 chr10 112510054 112510181 -27806584 + L1MA4 LINE L1 6172 6299 -1 307 308 74 26 chr10 112510221 112510790 -27805975 + L1ME3A LINE L1 4632 5272 -874 210 191 0 0 chr10 112510801 112510843 -27805922 + (CA)n Simple_repeat Simple_repeat 2 43 0 1451 284 88 43 chr10 112510871 112511704 -27805061 + L1ME3A LINE L1 5266 6135 -35 405 314 57 19 chr10 112512528 112512687 -27804078 + MIR3 SINE MIR 34 198 -10 249 256 72 80 chr10 112513193 112513318 -27803447 - MER103 DNA DNA 0 166 43 2153 130 47 8 chr10 112513444 112513805 -27802960 + THE1C LTR MaLR 1 375 0 309 250 38 0 chr10 112513911 112513991 -27802774 + MIR SINE MIR 51 133 -129 21 0 0 0 chr10 112514008 112514029 -27802736 + AT_rich Low_complexity Low_complexity 1 21 0 2029 196 167 9 chr10 112515371 112515820 -27800945 - MLT2B1 LTR ERVL 0 520 1 27698 182 27 6 chr10 112515820 112520748 -27796017 - ERVL-B1 LTR ERVL -7 5757 727 1756 204 31 5 chr10 112520854 112521242 -27795523 - MLT2B1 LTR ERVL -72 443 1 859 298 63 47 chr10 112521567 112522016 -27794749 + LTR16A LTR ERVL 8 457 0 389 247 0 0 chr10 112522035 112522120 -27794645 - L1ME LINE L1 -351 5815 5731 412 371 38 8 chr10 112523861 112524101 -27792664 + MIR SINE MIR 4 250 -12 22 0 0 0 chr10 112524128 112524150 -27792615 + AT_rich Low_complexity Low_complexity 1 22 0 2135 99 10 10 chr10 112524203 112524496 -27792269 - AluSx SINE Alu -19 293 1 308 331 79 6 chr10 112525445 112525623 -27791142 + MIR SINE MIR 17 207 -55 258 303 13 13 chr10 112525662 112525738 -27791027 + L2 LINE L2 2709 2784 -530 229 325 138 32 chr10 112526050 112526173 -27790592 - L2 LINE L2 0 3272 3137 310 114 0 0 chr10 112526505 112526549 -27790216 - MER5A DNA MER1_type -144 45 2 238 250 15 0 chr10 112527136 112527204 -27789561 + (CA)n Simple_repeat Simple_repeat 1 69 0 54 29 0 0 chr10 112527512 112527580 -27789185 + AT_rich Low_complexity Low_complexity 1 68 0 296 384 13 0 chr10 112528025 112528176 -27788589 + L2 LINE L2 2560 2712 -602 215 382 65 56 chr10 112528400 112528740 -27788025 + L2 LINE L2 2910 3252 -20 659 327 88 70 chr10 112528941 112529452 -27787313 + LTR67 LTR ERVL 32 551 -6 445 277 171 58 chr10 112529765 112530093 -27786672 - L3 LINE CR1 -7 1570 1206 383 257 38 44 chr10 112530117 112530300 -27786465 + L1MCc LINE L1 20 201 -6222 398 251 58 99 chr10 112530698 112531146 -27785619 + L1MCc LINE L1 1260 1894 -4889 183 42 0 0 chr10 112531146 112531170 -27785595 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 341 331 87 14 chr10 112531373 112531648 -27785117 + L1MCc LINE L1 2171 2465 -4657 651 189 16 0 chr10 112531812 112531934 -27784831 - L1M3 LINE L1 -802 5532 5409 825 125 7 14 chr10 112531935 112532079 -27784686 + L1M3 LINE L1 5528 5670 -498 676 168 0 0 chr10 112532096 112532221 -27784544 - L1MA10 LINE L1 -11 6323 6199 361 273 18 18 chr10 112532398 112532508 -27784257 - L2 LINE L2 -22 3291 3182 341 278 220 16 chr10 112532524 112532742 -27784023 + MIR SINE MIR 3 262 0 254 299 0 39 chr10 112532953 112533030 -27783735 + MIR SINE MIR 119 192 -70 212 133 0 44 chr10 112533166 112533211 -27783554 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 593 348 30 4 chr10 112533379 112533612 -27783153 + MIR SINE MIR 11 249 -13 706 147 0 8 chr10 112533946 112534075 -27782690 + L1MA10 LINE L1 6196 6323 -11 284 175 0 32 chr10 112534092 112534155 -27782610 - L1M3 LINE L1 -498 5670 5610 21 0 0 0 chr10 112534171 112534192 -27782573 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 112535589 112535610 -27781155 + AT_rich Low_complexity Low_complexity 1 21 0 243 342 61 35 chr10 112536389 112536503 -27780262 - L2 LINE L2 -20 3252 3136 239 312 64 32 chr10 112537207 112537332 -27779433 - MIR3 SINE MIR -25 183 55 2592 61 0 0 chr10 112537557 112537868 -27778897 + AluY SINE Alu 1 311 0 416 315 77 0 chr10 112537889 112538070 -27778695 - MIR SINE MIR 0 262 68 1176 219 38 20 chr10 112538904 112539251 -27777514 + L1MCc LINE L1 2929 3281 -3660 5577 125 27 3 chr10 112539428 112540307 -27776458 - L1PA15 LINE L1 -4 6161 5262 1551 223 73 0 chr10 112540333 112540715 -27776050 - L1P LINE L1 -825 5321 4912 345 174 157 8 chr10 112540714 112540835 -27775930 + L1ME1 LINE L1 5700 5838 -328 * 260 237 15 86 chr10 112540850 112541048 -27775717 - L1MEc LINE L1 -5554 842 659 382 312 48 42 chr10 112541375 112541564 -27775201 - L1MEc LINE L1 -6100 296 107 557 233 62 14 chr10 112541594 112541740 -27775025 + L1M4b LINE L1 2 154 -6705 6533 128 22 5 chr10 112541744 112542927 -27773838 - L1MA2 LINE L1 0 6304 5101 3671 258 44 36 chr10 112542926 112544005 -27772760 + L1M4b LINE L1 142 1228 -5631 * 211 318 34 0 chr10 112544064 112544152 -27772613 + MIR SINE MIR 166 256 -6 533 160 127 47 chr10 112545178 112545328 -27771437 - LTR16C LTR ERVL 0 491 330 223 250 12 0 chr10 112545396 112545480 -27771285 + (TA)n Simple_repeat Simple_repeat 1 85 0 223 275 29 0 chr10 112545558 112545627 -27771138 - MIR SINE MIR -109 153 83 3594 171 27 5 chr10 112545718 112546392 -27770373 + L1MB2 LINE L1 5447 6135 -36 222 209 48 114 chr10 112546504 112546609 -27770156 - L3 LINE CR1 -16 1561 1464 208 286 0 0 chr10 112547867 112547916 -27768849 + MIR SINE MIR 85 133 -129 609 305 41 12 chr10 112548007 112548253 -27768512 + MIR SINE MIR 2 254 -8 945 221 45 6 chr10 112548304 112548616 -27768149 + L1ME1 LINE L1 5765 6178 0 712 175 14 35 chr10 112548892 112549035 -27767730 + L1MA10 LINE L1 6184 6323 -11 443 343 77 5 chr10 112550157 112550364 -27766401 + MIR SINE MIR 1 222 -40 348 333 77 54 chr10 112550359 112551044 -27765721 + L2 LINE L2 1878 2578 -736 * 2027 154 49 35 chr10 112551384 112551754 -27765011 + THE1C LTR MaLR 1 375 0 2299 111 0 0 chr10 112552286 112552584 -27764181 - AluSc SINE Alu -11 298 1 24 0 0 0 chr10 112552585 112552609 -27764156 + AT_rich Low_complexity Low_complexity 1 24 0 327 178 22 33 chr10 112552703 112552793 -27763972 - L1MD2 LINE L1 -3 6356 6268 234 261 80 23 chr10 112553557 112553645 -27763120 - L2 LINE L2 -13 3259 3167 239 219 62 0 chr10 112553811 112553875 -27762890 - MIR SINE MIR -10 252 185 430 280 89 67 chr10 112554207 112554432 -27762333 - MIR SINE MIR -13 249 20 241 394 41 12 chr10 112555543 112555713 -27761052 - L2 LINE L2 -582 2732 2558 2241 136 72 13 chr10 112555717 112556091 -27760674 - MER61B LTR ERV1 -29 396 1 21 0 0 0 chr10 112556427 112556448 -27760317 + AT_rich Low_complexity Low_complexity 1 21 0 2212 181 34 63 chr10 112556731 112557173 -27759592 - MSTB1 LTR MaLR 0 432 4 458 246 76 134 chr10 112557892 112558405 -27758360 + Charlie8 DNA MER1_type 34 516 -1901 988 274 250 31 chr10 112558497 112559149 -27757616 - LTR50 LTR ERVL 0 795 1 242 288 98 76 chr10 112559277 112559461 -27757304 - MIR SINE MIR -62 200 13 553 288 0 7 chr10 112559886 112560032 -27756733 - MER91B DNA MER1_type -42 148 4 299 353 53 12 chr10 112560773 112560943 -27755822 + L3 LINE CR1 1400 1576 -1 30 27 0 0 chr10 112561123 112561160 -27755605 + AT_rich Low_complexity Low_complexity 1 37 0 245 344 62 0 chr10 112561617 112561713 -27755052 - L2 LINE L2 0 3272 3171 409 248 43 60 chr10 112561820 112561937 -27754828 + MLT1H LTR MaLR 58 172 -377 602 199 57 47 chr10 112562015 112562209 -27754556 + L1ME3 LINE L1 5950 6151 -13 225 256 0 0 chr10 112562213 112562256 -27754509 + (CA)n Simple_repeat Simple_repeat 2 44 0 641 345 50 28 chr10 112562302 112562702 -27754063 - L2 LINE L2 -1309 2005 1597 24 0 0 0 chr10 112562706 112562730 -27754035 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr10 112562762 112562791 -27753974 + AT_rich Low_complexity Low_complexity 1 29 0 409 224 61 0 chr10 112563086 112563184 -27753581 - MLT1H LTR MaLR -387 162 59 248 327 59 20 chr10 112563296 112563397 -27753368 + L2 LINE L2 3168 3272 0 218 331 102 13 chr10 112563479 112563636 -27753129 - L2 LINE L2 -1539 1775 1605 362 265 76 68 chr10 112564359 112564491 -27752274 - MIR3 SINE MIR -10 198 66 1144 280 117 40 chr10 112564728 112565250 -27751515 + MER68 LTR ERV1 1 562 0 1042 307 78 35 chr10 112565423 112565581 -27751184 + L2 LINE L2 2305 2455 -858 723 192 64 0 chr10 112565581 112565706 -27751059 + FLAM_A SINE Alu 1 133 0 1042 307 78 35 chr10 112565706 112566518 -27750247 + L2 LINE L2 2455 3313 0 191 36 36 0 chr10 112567006 112567034 -27749731 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 241 292 108 69 chr10 112567715 112567845 -27748920 + MIR SINE MIR 2 136 -126 540 219 47 35 chr10 112568057 112568226 -27748539 - MER33 DNA MER1_type -100 224 54 404 240 143 17 chr10 112568356 112568531 -27748234 - L1MA6 LINE L1 -139 6161 5965 403 291 22 8 chr10 112569588 112569722 -27747043 - MIR SINE MIR -79 183 48 279 295 9 54 chr10 112570101 112570213 -27746552 + MIR SINE MIR 89 195 -67 778 130 0 16 chr10 112570313 112570463 -27746302 + AluY SINE Alu 179 311 0 353 263 61 9 chr10 112570486 112570600 -27746165 + MIR SINE MIR 68 187 -75 237 368 24 29 chr10 112571349 112571558 -27745207 + MIR SINE MIR 55 262 0 193 297 166 35 chr10 112572078 112572223 -27744542 + L2 LINE L2 2185 2348 -966 513 238 47 64 chr10 112572481 112572716 -27744049 + LTR40b LTR ERVL 152 382 -80 512 349 13 13 chr10 112572982 112573211 -27743554 + MIR SINE MIR 34 262 0 24 32 0 0 chr10 112573577 112573608 -27743157 + AT_rich Low_complexity Low_complexity 1 31 0 517 260 8 0 chr10 112573943 112574066 -27742699 - MER94 DNA DNA -10 124 1 2253 89 31 10 chr10 112574384 112574677 -27742088 - AluY SINE Alu -12 299 1 535 314 81 0 chr10 112574704 112574876 -27741889 - MLT1K LTR MaLR -91 497 312 233 243 86 0 chr10 112575056 112575126 -27741639 - MLT1K LTR MaLR -468 120 45 527 320 104 30 chr10 112575337 112575606 -27741159 - MLT1J2 LTR MaLR -117 333 45 241 153 17 17 chr10 112576250 112576309 -27740456 + GA-rich Low_complexity Low_complexity 2 60 0 4828 100 0 18 chr10 112577298 112578009 -27738756 - THE1-int LTR MaLR -65 1515 818 2527 108 129 5 chr10 112578637 112579018 -27737747 - MSTA LTR MaLR 0 428 1 952 135 0 20 chr10 112579051 112579199 -27737566 + AluJo SINE Alu 6 150 -162 881 226 20 0 chr10 112579771 112579966 -27736799 - AluJo SINE Alu -92 220 22 339 271 14 29 chr10 112580232 112580422 -27736343 + CT-rich Low_complexity Low_complexity 1 187 0 366 299 0 43 chr10 112580489 112580687 -27736078 + CT-rich Low_complexity Low_complexity 1 189 0 224 59 29 0 chr10 112580691 112580725 -27736040 + (TC)n Simple_repeat Simple_repeat 1 35 0 277 293 16 16 chr10 112580725 112580848 -27735917 + (CCTCG)n Simple_repeat Simple_repeat 4 126 0 2001 105 41 27 chr10 112581208 112581503 -27735262 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 112582041 112582066 -27734699 + GC_rich Low_complexity Low_complexity 1 25 0 273 196 0 0 chr10 112582202 112582248 -27734517 + MER63 DNA MER1_type 735 780 -281 281 191 71 0 chr10 112582281 112582365 -27734400 + MER63 DNA MER1_type 867 956 -106 976 117 14 14 chr10 112582365 112582510 -27734255 - AluSg/x SINE Alu -18 292 148 2083 139 7 0 chr10 112583813 112584123 -27732642 - AluSx SINE Alu 0 312 1 236 274 18 9 chr10 112584483 112584596 -27732169 + T-rich Low_complexity Low_complexity 1 114 0 253 242 11 33 chr10 112584756 112584847 -27731918 - L1M4 LINE L1 -2856 3290 3202 1823 90 0 90 chr10 112584901 112585189 -27731576 + AluY SINE Alu 1 262 -49 732 152 15 23 chr10 112585190 112585322 -27731443 - FRAM SINE Alu -8 168 38 504 218 79 71 chr10 112585906 112586335 -27730430 - MLT1H LTR MaLR 0 530 60 305 280 14 71 chr10 112586355 112586566 -27730199 - HERV16 LTR ERVL -1340 3656 3458 201 154 0 0 chr10 112588228 112588267 -27728498 + C-rich Low_complexity Low_complexity 1 39 0 699 311 72 25 chr10 112590306 112590666 -27726099 + MLT1J2 LTR MaLR 22 398 -52 405 206 0 0 chr10 112591113 112591215 -27725550 + G-rich Low_complexity Low_complexity 1 102 0 455 246 14 43 chr10 112591485 112591623 -27725142 - MER94 DNA DNA 0 134 1 2823 149 27 8 chr10 112592380 112592902 -27723863 - L1 LINE L1 -1394 4752 4221 1722 112 0 48 chr10 112592902 112593196 -27723569 + AluSg SINE Alu 1 280 -30 287 205 42 48 chr10 112593581 112593747 -27723018 + CT-rich Low_complexity Low_complexity 2 166 0 237 343 21 17 chr10 112593796 112594032 -27722733 + C-rich Low_complexity Low_complexity 1 236 0 230 260 20 30 chr10 112594686 112594786 -27721979 + AluSg/x SINE Alu 202 300 0 530 126 105 173 chr10 112594788 112594979 -27721786 + L1MA7 LINE L1 5663 5840 -451 1808 133 8 0 chr10 112595149 112595405 -27721360 - Tigger3(Golem) DNA MER2_type 0 3029 2772 1305 167 120 8 chr10 112595442 112595700 -27721065 + MSTA LTR MaLR 1 287 -141 249 219 16 31 chr10 112596473 112596537 -27720228 - tRNA-Ile-ATT tRNA tRNA -3 74 12 226 183 50 0 chr10 112596886 112596946 -27719819 + C-rich Low_complexity Low_complexity 6 68 0 210 204 0 20 chr10 112598560 112598609 -27718156 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 183 157 22 45 chr10 112599298 112599387 -27717378 + GA-rich Low_complexity Low_complexity 1 87 0 6326 98 11 2 chr10 112599534 112600406 -27716359 + THE1B-int LTR MaLR 701 1580 0 240 30 0 30 chr10 112600409 112600442 -27716323 + THE1B LTR MaLR 3 34 -330 2879 161 23 13 chr10 112601059 112601536 -27715229 + L1PA12 LINE L1 1 482 -7099 552 211 8 8 chr10 112601532 112601665 -27715100 + L1P LINE L1 2951 3083 -3063 * 582 296 45 17 chr10 112602271 112602450 -27714315 - MIR SINE MIR -72 190 7 1250 174 51 96 chr10 112602851 112603207 -27713558 - MER58B DNA MER1_type -1 340 1 2194 240 31 15 chr10 112604581 112605248 -27711517 + L1ME3A LINE L1 4565 5242 -904 693 79 0 0 chr10 112605977 112606066 -27710699 - AluY SINE Alu -222 89 1 257 252 111 37 chr10 112606792 112606927 -27709838 - MER21B LTR ERV1 -373 490 346 218 198 25 86 chr10 112607674 112607755 -27709010 - MIR SINE MIR -1 261 186 225 343 0 0 chr10 112607763 112607836 -27708929 + MER91B DNA MER1_type 1 73 -117 1295 270 49 49 chr10 112611400 112611948 -27704817 + L1ME3A LINE L1 5614 6161 -9 1617 169 39 18 chr10 112612446 112612784 -27703981 - L1MA8 LINE L1 -59 6232 5888 186 43 0 0 chr10 112613519 112613542 -27703223 + (CATTT)n Simple_repeat Simple_repeat 3 25 0 1724 123 10 97 chr10 112613542 112613852 -27702913 - AluSx SINE Alu -29 283 1 412 141 172 0 chr10 112614453 112614552 -27702213 - L1MA8 LINE L1 -3 6288 6173 2046 125 10 0 chr10 112616580 112616876 -27699889 - AluSp SINE Alu -12 301 3 1582 182 21 14 chr10 112617642 112617933 -27698832 + L1M2 LINE L1 6 298 -6551 341 211 8 62 chr10 112618111 112618239 -27698526 + FRAM SINE Alu 43 163 -3 193 365 53 50 chr10 112618262 112618585 -27698180 - L2 LINE L2 -850 2464 2141 5425 150 11 31 chr10 112618717 112619898 -27696867 - L1PA14 LINE L1 -11 6150 5002 1665 98 0 69 chr10 112619898 112620204 -27696561 - AluY SINE Alu -20 291 7 5425 150 11 31 chr10 112620204 112620344 -27696421 - L1PA14 LINE L1 -1159 5002 4861 6805 238 83 40 chr10 112620473 112622643 -27694122 - L1M2 LINE L1 -4309 2900 433 1286 225 88 24 chr10 112622809 112623464 -27693301 + L1MEc LINE L1 1715 2520 -4087 * 5198 215 72 19 chr10 112623446 112624796 -27691969 + L1MC3 LINE L1 5781 7201 -584 1638 69 17 17 chr10 112624797 112625028 -27691737 + AluY SINE Alu 1 231 -80 37 52 0 0 chr10 112625133 112625191 -27691574 + AT_rich Low_complexity Low_complexity 1 58 0 776 48 38 0 chr10 112625211 112625316 -27691449 - L1PA4 LINE L1 0 6155 6047 673 250 36 62 chr10 112625549 112625773 -27690992 + MER20 DNA MER1_type 1 218 -1 340 273 106 119 chr10 112626386 112626764 -27690001 - L2 LINE L2 -71 3242 2870 25 31 0 0 chr10 112626906 112626938 -27689827 + AT_rich Low_complexity Low_complexity 1 32 0 221 245 0 0 chr10 112627239 112627288 -27689477 + T-rich Low_complexity Low_complexity 3 51 0 25 0 0 0 chr10 112627318 112627343 -27689422 + AT_rich Low_complexity Low_complexity 1 25 0 290 239 42 0 chr10 112627698 112627769 -27688996 - MIR SINE MIR -70 192 119 346 228 50 8 chr10 112628507 112628639 -27688126 - MIR SINE MIR -60 202 65 2437 67 3 16 chr10 112628799 112629113 -27687652 - AluY SINE Alu 0 311 2 251 300 0 0 chr10 112629178 112629238 -27687527 + (TATG)n Simple_repeat Simple_repeat 3 62 0 580 255 113 24 chr10 112629582 112629794 -27686971 + MIR SINE MIR 32 262 0 23 97 0 0 chr10 112630572 112630644 -27686121 + AT_rich Low_complexity Low_complexity 1 72 0 229 273 0 40 chr10 112631741 112631840 -27684925 + GA-rich Low_complexity Low_complexity 5 99 0 1031 258 30 11 chr10 112631901 112632172 -27684593 + L1PB3 LINE L1 826 1101 -5686 * 4020 184 15 45 chr10 112632171 112632563 -27684202 + L1PB3 LINE L1 3596 3998 -2799 2187 99 0 40 chr10 112632563 112632885 -27683880 + AluSc SINE Alu 1 309 0 4020 184 15 45 chr10 112632885 112633430 -27683335 + L1PB3 LINE L1 3998 4505 -2292 3541 186 12 15 chr10 112633458 112634634 -27682131 + L1PB3 LINE L1 5202 6372 -582 1243 153 0 14 chr10 112636134 112636343 -27680422 + L1PB3 LINE L1 6600 6805 0 3309 189 13 3 chr10 112636897 112637528 -27679237 - L1MB7 LINE L1 -16 6168 5532 643 225 92 12 chr10 112638703 112638876 -27677889 + MIR SINE MIR 21 207 -55 234 269 0 0 chr10 112638909 112638961 -27677804 + (CAT)n Simple_repeat Simple_repeat 3 54 0 226 359 90 54 chr10 112639478 112639701 -27677064 + MIR SINE MIR 20 250 -12 581 126 0 10 chr10 112639900 112640003 -27676762 + (GGAA)n Simple_repeat Simple_repeat 2 103 0 333 323 44 31 chr10 112640510 112640739 -27676026 + L1ME LINE L1 5389 5620 -501 423 0 0 0 chr10 112640802 112640849 -27675916 + (CA)n Simple_repeat Simple_repeat 2 48 0 732 150 16 16 chr10 112641797 112641915 -27674850 - MER20 DNA MER1_type -2 217 100 517 222 6 62 chr10 112641915 112642077 -27674688 - LTR19C LTR ERV1 0 779 627 186 263 70 18 chr10 112642925 112642982 -27673783 + L2 LINE L2 3193 3252 -61 328 225 31 23 chr10 112642996 112643125 -27673640 + (TATATG)n Simple_repeat Simple_repeat 2 131 0 238 309 99 0 chr10 112643125 112643206 -27673559 + MIR3 SINE MIR 85 173 -35 1390 256 60 37 chr10 112643365 112643981 -27672784 + L1MC4a LINE L1 5257 5886 -1922 5148 157 13 15 chr10 112644012 112645391 -27671374 + L1PB3 LINE L1 4676 6055 -99 543 149 70 158 chr10 112645821 112646049 -27670716 - L1MCa LINE L1 -5502 924 717 2599 166 149 6 chr10 112646049 112646269 -27670496 + MER6A DNA MER2_type 1 188 -677 290 98 20 0 chr10 112646269 112646320 -27670445 + (TG)n Simple_repeat Simple_repeat 2 53 0 2599 166 149 6 chr10 112646320 112646628 -27670137 + MER6A DNA MER2_type 188 605 0 3047 184 16 80 chr10 112646628 112647366 -27669399 - L1MCa LINE L1 -5708 718 28 545 274 79 32 chr10 112647397 112647986 -27668779 - L1MB7 LINE L1 -602 5562 4951 23 33 0 0 chr10 112648082 112648112 -27668653 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr10 112648195 112648234 -27668531 + AT_rich Low_complexity Low_complexity 1 39 0 1230 278 64 23 chr10 112648414 112649191 -27667574 - L1MB7 LINE L1 -1297 4849 4041 213 39 0 0 chr10 112649863 112649889 -27666876 + (CA)n Simple_repeat Simple_repeat 1 26 0 414 331 0 0 chr10 112651889 112652061 -27664704 - L1ME LINE L1 -305 5816 5645 822 129 13 7 chr10 112652659 112652814 -27663951 + LTR1 LTR ERV1 1 156 -629 297 382 118 0 chr10 112653824 112653934 -27662831 + L2 LINE L2 3134 3256 -16 906 241 91 55 chr10 112654010 112655194 -27661571 + L1MC4 LINE L1 5908 7048 -760 270 0 0 0 chr10 112655194 112655224 -27661541 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 906 241 91 55 chr10 112655224 112655602 -27661163 + L1MC4 LINE L1 7048 7391 -417 2066 119 3 0 chr10 112655602 112655920 -27660845 + AluSx SINE Alu 1 319 0 906 241 91 55 chr10 112655920 112656255 -27660510 + L1MC4 LINE L1 7391 7713 -95 201 39 0 0 chr10 112656258 112656284 -27660481 + (TG)n Simple_repeat Simple_repeat 2 27 0 525 218 30 0 chr10 112656381 112656514 -27660251 + L1MC4 LINE L1 7904 8040 -2 185 342 26 0 chr10 112656576 112656652 -27660113 - MIR SINE MIR -87 121 44 23 0 0 0 chr10 112656965 112656988 -27659777 + AT_rich Low_complexity Low_complexity 1 23 0 636 239 55 13 chr10 112659668 112659906 -27656859 - L1MB8 LINE L1 0 6178 5931 864 216 66 44 chr10 112659906 112660133 -27656632 - MLT1H LTR MaLR -261 288 57 294 397 61 33 chr10 112660419 112660941 -27655824 + L2 LINE L2 2348 2884 -430 486 305 112 22 chr10 112661008 112661231 -27655534 + MIR SINE MIR 10 252 -10 204 350 0 17 chr10 112661434 112661494 -27655271 + L2 LINE L2 3125 3183 -89 1778 165 3 14 chr10 112662099 112662396 -27654369 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr10 112662758 112662782 -27653983 + AT_rich Low_complexity Low_complexity 1 24 0 652 344 83 8 chr10 112663937 112664431 -27652334 + LTR50 LTR ERVL 340 794 -1 216 0 0 0 chr10 112664568 112664592 -27652173 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1252 261 121 36 chr10 112665405 112666689 -27650076 + L1MCc LINE L1 1065 2481 -4460 587 135 0 0 chr10 112666795 112666884 -27649881 + 5S rRNA rRNA 2 90 -31 232 238 82 7 chr10 112667009 112667156 -27649609 + L1M4 LINE L1 4366 4523 -1623 1437 236 33 25 chr10 112667174 112667573 -27649192 - MLT1E2 LTR MaLR -224 402 1 216 171 0 0 chr10 112667614 112667649 -27649116 + (CA)n Simple_repeat Simple_repeat 1 35 0 372 274 53 50 chr10 112667682 112667750 -27649015 + L1MEc LINE L1 1166 1232 -5194 2242 127 0 0 chr10 112667750 112668057 -27648708 + AluSx SINE Alu 1 307 -5 372 274 53 50 chr10 112668057 112668304 -27648461 + L1MEc LINE L1 1232 1415 -5011 311 326 49 54 chr10 112668335 112668559 -27648206 + L1MEc LINE L1 1534 1756 -4670 261 259 75 14 chr10 112668562 112668709 -27648056 + L1MEc LINE L1 1784 1939 -4668 5391 58 5 26 chr10 112668771 112669549 -27647216 + L1P1 LINE L1 1 762 -5384 * 20845 26 0 4 chr10 112669546 112669621 -27647144 + L1P1 LINE L1 2767 2841 -3314 2879 10 0 0 chr10 112669621 112669935 -27646830 + AluYb8 SINE Alu 1 314 -4 20845 26 0 4 chr10 112669935 112672751 -27644014 + L1P1 LINE L1 2841 5646 -509 555 96 0 0 chr10 112672863 112672946 -27643819 + L1PA16 LINE L1 6084 6166 0 475 293 81 27 chr10 112673079 112673338 -27643427 + HAL1 LINE L1 1301 1573 -934 1819 186 0 7 chr10 112673469 112673775 -27642990 - AluJb SINE Alu -8 304 1 250 356 119 38 chr10 112674407 112674529 -27642236 + L3 LINE CR1 867 978 -599 2287 108 0 7 chr10 112674529 112674836 -27641929 - AluSg SINE Alu -5 305 1 250 356 119 38 chr10 112674836 112675266 -27641499 + L3 LINE CR1 978 1464 -113 264 284 110 0 chr10 112675571 112675680 -27641085 - MER117 DNA MER1_type -76 121 1 256 267 0 80 chr10 112675885 112675901 -27640864 - MER91 DNA MER1_type -2 138 122 1967 112 7 4 chr10 112675901 112676177 -27640588 - AluSx SINE Alu -8 304 28 256 267 0 80 chr10 112676177 112676235 -27640530 - MER91 DNA MER1_type -18 122 70 49 43 0 0 chr10 112676433 112676503 -27640262 + AT_rich Low_complexity Low_complexity 1 70 0 3232 14 0 0 chr10 112676503 112676871 -27639894 + L1PA2 LINE L1 5788 6155 0 368 321 30 0 chr10 112676924 112677092 -27639673 + L1M4 LINE L1 3995 4167 -1979 21 0 0 0 chr10 112677092 112677113 -27639652 + AT_rich Low_complexity Low_complexity 1 21 0 323 319 7 30 chr10 112677117 112677252 -27639513 + L1M4 LINE L1 4236 4367 -1779 3678 178 16 9 chr10 112678061 112678736 -27638029 + MER54B LTR ERVL 1 680 -113 2206 92 0 3 chr10 112678917 112679199 -27637566 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr10 112679200 112679223 -27637542 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 606 210 86 56 chr10 112679598 112679760 -27637005 - MER58A DNA MER1_type 0 167 1 3995 138 27 5 chr10 112680039 112680669 -27636096 - LTR9B LTR ERV1 0 644 1 254 321 100 14 chr10 112682007 112682147 -27634618 + MER5A DNA MER1_type 35 186 -3 285 360 105 31 chr10 112682152 112682446 -27634319 - L3 LINE CR1 -42 1535 1220 253 271 143 38 chr10 112683001 112683134 -27633631 + Charlie8 DNA MER1_type 85 231 -2186 382 302 39 23 chr10 112683347 112683476 -27633289 + MIR SINE MIR 13 143 -119 2884 10 0 0 chr10 112684344 112684658 -27632107 - AluYb8 SINE Alu -4 314 1 244 309 22 96 chr10 112684661 112684797 -27631968 + MER5A DNA MER1_type 61 186 -3 273 346 15 15 chr10 112686335 112686465 -27630300 + MLT1K LTR MaLR 38 167 -421 347 250 52 26 chr10 112686603 112686719 -27630046 + MLT1K LTR MaLR 345 463 -125 546 263 52 66 chr10 112686819 112686860 -27629905 + MER63A DNA MER1_type 1 41 -1647 342 0 0 0 chr10 112686860 112686898 -27629867 + (TG)n Simple_repeat Simple_repeat 2 39 0 546 263 52 66 chr10 112686898 112687069 -27629696 + MER63A DNA MER1_type 41 210 0 412 331 11 17 chr10 112687398 112687579 -27629186 + MIR SINE MIR 82 261 -1 291 266 19 25 chr10 112687684 112687842 -27628923 - L1ME LINE L1 -5072 998 842 267 224 60 35 chr10 112687977 112688093 -27628672 - L1ME LINE L1 -5426 644 526 405 294 53 64 chr10 112688385 112688525 -27628240 - L1ME LINE L1 -5644 426 286 1916 128 20 43 chr10 112688525 112688614 -27628151 - MER1B DNA MER1_type -2373 337 247 423 0 0 0 chr10 112688614 112688661 -27628104 + (TG)n Simple_repeat Simple_repeat 1 47 0 1916 128 20 43 chr10 112688661 112688916 -27627849 - MER1B DNA MER1_type -2463 247 1 405 294 53 64 chr10 112688916 112689136 -27627629 - L1ME LINE L1 -5784 286 70 1938 147 202 63 chr10 112690734 112691273 -27625492 - LTR18B LTR ERVL 0 614 1 242 336 78 18 chr10 112691486 112691703 -27625062 - L2 LINE L2 -911 2403 2174 649 264 55 105 chr10 112692435 112692853 -27623912 - MLT1F1 LTR MaLR -187 403 6 198 0 0 0 chr10 112692954 112692976 -27623789 + (TA)n Simple_repeat Simple_repeat 1 22 0 2323 96 3 0 chr10 112692982 112693273 -27623492 - AluSp SINE Alu -19 294 3 363 300 94 18 chr10 112694576 112694746 -27622019 - MIR SINE MIR -60 202 20 231 279 29 29 chr10 112694869 112694937 -27621828 + L2 LINE L2 3201 3268 -4 201 133 0 0 chr10 112696151 112696181 -27620584 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 192 282 59 47 chr10 112696444 112696529 -27620236 - MIR SINE MIR -112 150 65 218 139 47 0 chr10 112697398 112697441 -27619324 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 274 312 0 21 chr10 112698386 112698479 -27618286 - MLT1K LTR MaLR -406 182 92 337 315 94 33 chr10 112698884 112699065 -27617700 - MIR SINE MIR -65 197 6 406 321 103 0 chr10 112700217 112700382 -27616383 + MIR SINE MIR 1 182 -80 399 21 0 0 chr10 112701714 112701762 -27615003 + (GA)n Simple_repeat Simple_repeat 1 48 0 219 360 75 12 chr10 112702244 112702405 -27614360 - MIR SINE MIR -63 199 29 336 174 170 71 chr10 112702523 112702700 -27614065 - MIR SINE MIR -49 213 15 1774 152 0 7 chr10 112703956 112704239 -27612526 + AluSc SINE Alu 1 281 -28 626 258 43 135 chr10 112704298 112704690 -27612075 + MLT1H LTR MaLR 1 356 -193 2564 37 0 0 chr10 112704693 112704987 -27611778 - AluY SINE Alu -6 305 12 1694 171 77 74 chr10 112704987 112705568 -27611197 + MER67C LTR ERV1 2 514 0 312 198 33 44 chr10 112705656 112705747 -27611018 + MLT1H LTR MaLR 492 581 -14 1580 223 30 14 chr10 112706264 112706631 -27610134 + MLT2D LTR ERVL 1 373 -41 394 86 61 43 chr10 112706649 112706812 -27609953 + (TA)n Simple_repeat Simple_repeat 1 166 0 285 169 0 34 chr10 112706816 112706875 -27609890 + MLT2D LTR ERVL 464 520 0 1326 245 102 58 chr10 112707629 112708151 -27608614 + MLT1H LTR MaLR 1 545 -4 345 321 203 20 chr10 112708229 112708475 -27608290 + L2 LINE L2 2862 3152 -161 184 128 21 21 chr10 112708605 112708652 -27608113 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr10 112708698 112708720 -27608045 + AT_rich Low_complexity Low_complexity 1 22 0 186 133 0 0 chr10 112708799 112708829 -27607936 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1711 179 0 17 chr10 112709094 112709384 -27607381 - AluJo SINE Alu -22 290 6 448 347 68 66 chr10 112710828 112711402 -27605363 + MLT1K LTR MaLR 14 588 0 388 313 57 26 chr10 112711462 112711654 -27605111 - LTR16C LTR ERVL -18 473 276 2347 93 51 25 chr10 112711911 112712265 -27604500 - THE1B LTR MaLR -1 363 1 5142 99 26 6 chr10 112712269 112713293 -27603472 - THE1B-int LTR MaLR -4 1576 392 2042 129 13 10 chr10 112713448 112713759 -27603006 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 112714392 112714417 -27602348 + AT_rich Low_complexity Low_complexity 1 25 0 3131 8 0 0 chr10 112714565 112714917 -27601848 + L1HS LINE L1 5803 6154 -1 264 351 125 0 chr10 112715129 112715297 -27601468 - HERV16 LTR ERVL -2803 2193 2005 290 340 27 27 chr10 112715386 112715536 -27601229 - HERV16 LTR ERVL -3734 1920 1771 2009 180 53 17 chr10 112715963 112716379 -27600386 + MSTB1 LTR MaLR 1 431 -1 1023 123 0 0 chr10 112718194 112718349 -27598416 + L1PA13 LINE L1 5994 6148 -15 273 326 76 0 chr10 112718665 112718797 -27597968 + MER117 DNA MER1_type 56 197 0 251 336 21 21 chr10 112718816 112718956 -27597809 - LTR16C LTR ERVL 0 491 352 262 294 54 65 chr10 112721121 112721305 -27595460 - MIR SINE MIR -46 216 35 207 69 0 0 chr10 112723097 112723126 -27593639 + (TG)n Simple_repeat Simple_repeat 2 30 0 285 405 30 0 chr10 112723492 112723623 -27593142 + L2 LINE L2 3134 3268 -4 1294 298 102 11 chr10 112724433 112724903 -27591862 - MLT1G LTR MaLR -14 576 64 1480 209 13 26 chr10 112724931 112725233 -27591532 + AluJb SINE Alu 1 298 -14 21 0 0 0 chr10 112725237 112725258 -27591507 + AT_rich Low_complexity Low_complexity 1 21 0 3726 177 42 18 chr10 112725756 112726472 -27590293 + MER44D DNA MER2_type 1 605 0 383 336 83 4 chr10 112727032 112727261 -27589504 - MLT1A1-int LTR MaLR -834 537 291 299 259 41 75 chr10 112727370 112727517 -27589248 + MLT1K LTR MaLR 219 360 -228 1337 221 153 36 chr10 112727539 112728069 -27588696 - LTR38B LTR ERV1 -18 592 1 431 271 78 30 chr10 112728084 112728250 -27588515 + MLT1K LTR MaLR 381 554 -34 249 321 170 0 chr10 112729147 112729253 -27587512 + MIR SINE MIR 46 169 -93 243 0 0 0 chr10 112729599 112729626 -27587139 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 228 86 0 0 chr10 112729704 112729739 -27587026 + (TG)n Simple_repeat Simple_repeat 2 36 0 1524 202 31 36 chr10 112729740 112730096 -27586669 - MLT1A1 LTR MaLR -4 361 8 312 27 0 0 chr10 112730103 112730140 -27586625 + (CA)n Simple_repeat Simple_repeat 2 38 0 1860 246 113 39 chr10 112731335 112731901 -27584864 + MLT2F LTR ERVL 1 618 -45 261 0 0 0 chr10 112731901 112731930 -27584835 + (CA)n Simple_repeat Simple_repeat 2 30 0 1860 246 113 39 chr10 112731930 112731980 -27584785 + MLT2F LTR ERVL 618 663 0 212 122 24 0 chr10 112732094 112732135 -27584630 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 21 36 0 0 chr10 112733292 112733320 -27583445 + AT_rich Low_complexity Low_complexity 1 28 0 1183 145 26 0 chr10 112733867 112734060 -27582705 + L1PA16 LINE L1 5969 6166 0 546 293 81 27 chr10 112734193 112734452 -27582313 + HAL1 LINE L1 1301 1573 -934 1782 186 0 7 chr10 112734583 112734889 -27581876 - AluJb SINE Alu -8 304 1 260 353 121 40 chr10 112735521 112735643 -27581122 + L3 LINE CR1 867 978 -599 2246 111 0 7 chr10 112735643 112735950 -27580815 - AluSg SINE Alu -5 305 1 260 353 121 40 chr10 112735950 112736380 -27580385 + L3 LINE CR1 978 1464 -113 292 288 209 0 chr10 112736631 112736794 -27579971 - MER117 DNA MER1_type 0 197 1 260 267 0 80 chr10 112736999 112737015 -27579750 - MER91 DNA MER1_type -2 138 122 1972 109 7 4 chr10 112737015 112737291 -27579474 - AluSx SINE Alu -8 304 28 260 267 0 80 chr10 112737291 112737349 -27579416 - MER91 DNA MER1_type -18 122 70 49 43 0 0 chr10 112737547 112737617 -27579148 + AT_rich Low_complexity Low_complexity 1 70 0 3160 22 0 0 chr10 112737617 112737985 -27578780 + L1PA2 LINE L1 5788 6155 0 22 0 0 0 chr10 112737998 112738020 -27578745 + AT_rich Low_complexity Low_complexity 1 22 0 293 373 56 12 chr10 112738134 112738295 -27578470 - MIR3 SINE MIR -22 186 19 25 0 0 0 chr10 112739058 112739083 -27577682 + AT_rich Low_complexity Low_complexity 1 25 0 554 295 27 27 chr10 112739195 112739378 -27577387 - MIR SINE MIR -41 221 39 200 206 0 0 chr10 112741545 112741579 -27575186 - L2 LINE L2 -30 3283 3250 29 0 0 0 chr10 112743273 112743302 -27573463 + AT_rich Low_complexity Low_complexity 1 29 0 255 297 0 0 chr10 112743493 112743557 -27573208 - L2 LINE L2 0 3313 3250 453 36 0 0 chr10 112744157 112744212 -27572553 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 51 0 0 chr10 112745134 112745173 -27571592 + AT_rich Low_complexity Low_complexity 1 39 0 402 333 20 15 chr10 112746172 112746370 -27570395 - MLT1L LTR MaLR -101 514 316 399 257 48 0 chr10 112747227 112747332 -27569433 - MIR3 SINE MIR -3 205 96 7039 177 26 34 chr10 112747347 112749866 -27566899 + L1MA6 LINE L1 3780 6297 -3 577 302 41 41 chr10 112750766 112751011 -27565754 + MIR SINE MIR 18 262 0 226 71 54 54 chr10 112751202 112751258 -27565507 + (TTATA)n Simple_repeat Simple_repeat 5 60 0 213 246 0 0 chr10 112751269 112751334 -27565431 + (TA)n Simple_repeat Simple_repeat 2 66 0 186 368 40 0 chr10 112752202 112752278 -27564487 + L2 LINE L2 2851 2929 -343 251 356 38 30 chr10 112752430 112752562 -27564203 + L2 LINE L2 3148 3280 -33 1518 110 13 4 chr10 112753075 112753303 -27563462 - AluSp SINE Alu -13 300 71 460 79 0 0 chr10 112753303 112753366 -27563399 - Tigger7 DNA MER2_type -2039 448 386 7653 168 114 29 chr10 112753366 112754984 -27561781 + MER52A LTR ERV1 1 1755 0 449 170 0 64 chr10 112754985 112755079 -27561686 - Tigger7 DNA MER2_type -2100 387 300 245 270 79 11 chr10 112755050 112755139 -27561626 - MLT1L LTR MaLR -520 95 1 * 1665 233 0 0 chr10 112755169 112755487 -27561278 - Tigger7 DNA MER2_type -2169 318 1 1072 257 32 35 chr10 112755487 112755891 -27560874 - L1MA9 LINE L1 -44 6268 5866 286 323 35 87 chr10 112755924 112756178 -27560587 + L2 LINE L2 3028 3268 -4 296 315 98 67 chr10 112756246 112756602 -27560163 + MLT1J LTR MaLR 1 367 -144 7221 64 16 0 chr10 112758756 112760460 -27556305 + L1PA6 LINE L1 4429 6153 -1 563 302 45 18 chr10 112760799 112761021 -27555744 - MIR SINE MIR -18 244 17 383 194 152 31 chr10 112762722 112762913 -27553852 - L1ME4a LINE L1 -38 6083 5870 363 263 105 0 chr10 112763816 112763930 -27552835 + LTR16C LTR ERVL 364 489 -2 455 287 46 26 chr10 112764176 112764371 -27552394 + MIR SINE MIR 64 262 0 180 0 0 0 chr10 112764644 112764664 -27552101 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 6059 111 0 2 chr10 112764665 112765835 -27550930 - L1PA8 LINE L1 0 6172 5006 1502 244 101 7 chr10 112765836 112766274 -27550491 + MLT1D LTR MaLR 27 505 0 2273 122 44 6 chr10 112766278 112766639 -27550126 + THE1C LTR MaLR 1 375 0 275 0 29 0 chr10 112767134 112767169 -27549596 + (CA)n Simple_repeat Simple_repeat 2 37 0 4073 157 30 40 chr10 112767842 112768684 -27548081 + L1MA7 LINE L1 5459 6291 0 421 310 145 30 chr10 112768736 112769129 -27547636 - MLT1L LTR MaLR -10 605 168 305 298 95 25 chr10 112770955 112771113 -27545652 - MIR3 SINE MIR -3 205 37 407 306 115 27 chr10 112771142 112771325 -27545440 + MIR SINE MIR 14 212 -50 415 256 60 0 chr10 112771400 112771517 -27545248 + MER45A DNA AcHobo 55 178 0 212 262 0 0 chr10 112771517 112771559 -27545206 + L2 LINE L2 3256 3297 -16 206 130 22 43 chr10 112772040 112772086 -27544679 + A-rich Low_complexity Low_complexity 2 46 0 4071 264 79 47 chr10 112772287 112775077 -27541688 + L1MB8 LINE L1 9 3013 -3631 2751 232 64 31 chr10 112775123 112775762 -27541003 - L1MCa LINE L1 -4849 1058 441 2268 137 28 14 chr10 112775762 112776121 -27540644 - THE1B LTR MaLR 0 364 1 10673 122 14 2 chr10 112776123 112777683 -27539082 - THE1B-int LTR MaLR -2 1578 1 2118 162 31 14 chr10 112777683 112778041 -27538724 - THE1B LTR MaLR 0 364 1 2751 232 64 31 chr10 112778041 112778651 -27538114 - L1MCa LINE L1 -5465 442 19 913 274 48 11 chr10 112778670 112779130 -27537635 + L1MB8 LINE L1 3070 3546 -3098 * 2544 259 47 45 chr10 112779113 112780170 -27536595 + L1MB8 LINE L1 4473 5532 -1112 1538 115 1 3 chr10 112780178 112780410 -27536355 + L1MC/D LINE L1 5582 5806 -360 239 208 0 19 chr10 112780410 112780463 -27536302 + (TA)n Simple_repeat Simple_repeat 1 52 0 2458 122 3 0 chr10 112780463 112780832 -27535933 + L1PB1 LINE L1 5782 6151 0 779 164 38 0 chr10 112780843 112781002 -27535763 + L1MB8 LINE L1 5542 5706 -938 1036 157 59 5 chr10 112781008 112781212 -27535553 + L1MB8 LINE L1 5915 6129 -543 208 209 15 15 chr10 112781230 112781297 -27535468 + (TA)n Simple_repeat Simple_repeat 2 68 0 516 130 53 0 chr10 112781311 112781418 -27535347 + L1MB8 LINE L1 6173 6284 -388 4801 196 25 45 chr10 112781420 112783105 -27533660 + L1MC2 LINE L1 4709 6344 0 1276 217 70 8 chr10 112783109 112783478 -27533287 + L1MB8 LINE L1 6271 6662 -14 658 228 49 0 chr10 112783921 112784083 -27532682 + MER3 DNA MER1_type 1 123 -86 334 214 29 29 chr10 112785147 112785250 -27531515 + GA-rich Low_complexity Low_complexity 3 105 0 673 281 139 45 chr10 112785596 112786020 -27530745 - MLT1H LTR MaLR -15 534 71 961 198 0 0 chr10 112787049 112787221 -27529544 + MER20 DNA MER1_type 48 219 0 3013 97 29 31 chr10 112787332 112787785 -27528980 + MLT2A2 LTR ERVL 1 452 -1 1073 196 35 4 chr10 112787785 112788014 -27528751 + L1 LINE L1 3521 3756 -2390 1890 193 161 158 chr10 112788104 112788522 -27528243 - L1MD3 LINE L1 -14 7981 7566 2069 118 0 7 chr10 112788522 112788819 -27527946 + AluSg SINE Alu 1 295 -15 1890 193 161 158 chr10 112788819 112788897 -27527868 - L1MD3 LINE L1 -429 7566 7490 277 188 0 0 chr10 112788897 112788945 -27527820 + MLT2A1 LTR ERVL 320 367 -77 1890 193 161 158 chr10 112788945 112789038 -27527727 - L1MD3 LINE L1 -505 7490 7399 498 266 31 0 chr10 112789038 112789166 -27527599 - MLT1F1 LTR MaLR -433 134 3 1890 193 161 158 chr10 112789166 112789747 -27527018 - L1MD3 LINE L1 -596 7399 6631 956 224 10 57 chr10 112789758 112790057 -27526708 - L1MA10 LINE L1 0 6334 6050 668 316 50 68 chr10 112790054 112790868 -27525897 - L1ME LINE L1 -5174 896 97 * 330 303 117 7 chr10 112791717 112791862 -27524903 + L1MA9 LINE L1 2 162 -5979 1862 149 3 10 chr10 112791865 112792154 -27524611 - AluJb SINE Alu -14 298 12 2773 182 12 33 chr10 112792404 112793002 -27523763 - LTR60 LTR ERV1 -1 585 1 327 254 0 0 chr10 112793002 112793065 -27523700 + L1MA9 LINE L1 182 244 -5897 232 222 74 0 chr10 112793062 112793143 -27523622 + L1MA9 LINE L1 3279 3365 -2845 * 2430 185 33 12 chr10 112793143 112793826 -27522939 + L1MA9 LINE L1 5149 5849 -527 572 197 83 8 chr10 112793826 112793958 -27522807 + AluJb SINE Alu 162 303 -9 28 0 0 0 chr10 112794003 112794031 -27522734 + AT_rich Low_complexity Low_complexity 1 28 0 1666 178 90 52 chr10 112794054 112794172 -27522593 + L1MA9 LINE L1 5878 5990 -386 3721 103 18 31 chr10 112794172 112794743 -27522022 - MER61E LTR ERV1 -4 565 3 1666 178 90 52 chr10 112794743 112794977 -27521788 + L1MA9 LINE L1 5990 6253 -123 4777 54 2 3 chr10 112794977 112795569 -27521196 + LTR10C LTR ERV1 1 591 0 1666 178 90 52 chr10 112795569 112795659 -27521106 + L1MA9 LINE L1 6253 6338 -38 3102 191 49 22 chr10 112795836 112796532 -27520233 + LTR8A LTR ERV1 1 715 -12 3239 229 26 11 chr10 112796554 112796822 -27519943 + MER21B LTR ERV1 15 277 -586 5058 132 45 25 chr10 112796822 112797707 -27519058 - MER4D LTR ERV1 0 903 1 3239 229 26 11 chr10 112797707 112798090 -27518675 + MER21B LTR ERV1 277 676 -187 21 0 0 0 chr10 112800765 112800786 -27515979 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 112800840 112800861 -27515904 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2346 50 0 4 chr10 112800864 112801144 -27515621 - AluY SINE Alu -32 279 1 679 228 97 21 chr10 112801249 112801585 -27515180 + L1MEc LINE L1 2138 2459 -3756 2398 71 0 13 chr10 112801591 112801902 -27514863 - AluY SINE Alu -4 307 1 1043 280 51 3 chr10 112801977 112802313 -27514452 - L1MEc LINE L1 -6016 380 29 312 70 0 0 chr10 112802391 112802434 -27514331 + (CA)n Simple_repeat Simple_repeat 1 43 0 1625 185 25 39 chr10 112802439 112802796 -27513969 + MLT1A1 LTR MaLR 14 365 0 406 111 0 25 chr10 112802833 112802914 -27513851 + (GA)n Simple_repeat Simple_repeat 2 80 0 941 185 0 6 chr10 112803237 112803394 -27513371 - FAM SINE Alu -19 156 1 386 349 142 21 chr10 112803441 112803954 -27512811 - L2 LINE L2 -454 2860 2286 185 296 10 0 chr10 112804999 112805097 -27511668 + CT-rich Low_complexity Low_complexity 2 100 0 22 0 0 0 chr10 112806735 112806757 -27510008 + AT_rich Low_complexity Low_complexity 1 22 0 39 0 0 0 chr10 112806842 112806881 -27509884 + AT_rich Low_complexity Low_complexity 1 39 0 450 98 22 11 chr10 112807446 112807538 -27509227 + (GA)n Simple_repeat Simple_repeat 1 93 0 4225 138 18 23 chr10 112807671 112808236 -27508529 + MER50 LTR ERV1 1 567 -167 261 0 0 0 chr10 112808236 112808265 -27508500 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2145 73 3 35 chr10 112808268 112808557 -27508208 - AluY SINE Alu -31 280 1 4225 138 18 23 chr10 112808557 112808696 -27508069 + MER50 LTR ERV1 569 706 -28 436 237 21 0 chr10 112809140 112809233 -27507532 - Tigger7 DNA MER2_type 0 2487 2393 1293 205 47 0 chr10 112809236 112809490 -27507275 - Tigger7 DNA MER2_type -467 266 1 1354 181 61 105 chr10 112809499 112809669 -27507096 + MER67C LTR ERV1 1 177 -337 2530 0 0 25 chr10 112809669 112809954 -27506811 + AluYa5 SINE Alu 34 311 0 1354 181 61 105 chr10 112809954 112810329 -27506436 + MER67C LTR ERV1 177 479 -35 485 217 8 0 chr10 112811703 112811832 -27504933 + CT-rich Low_complexity Low_complexity 1 130 0 399 310 148 15 chr10 112811898 112812101 -27504664 - MIR SINE MIR -28 234 5 804 197 16 16 chr10 112812190 112812373 -27504392 + AluSg/x SINE Alu 126 308 -2 714 298 145 33 chr10 112812735 112814063 -27502702 + L1ME1 LINE L1 37 1512 -4884 2292 234 44 90 chr10 112814072 112814483 -27502282 + L1M4 LINE L1 1 430 -6112 1228 163 59 7 chr10 112814483 112814753 -27502012 - L1MA8 LINE L1 -1 6290 6007 2292 234 44 90 chr10 112814753 112814814 -27501951 + L1M4 LINE L1 430 492 -6050 345 93 0 0 chr10 112814814 112814868 -27501897 + (TG)n Simple_repeat Simple_repeat 2 55 0 2292 234 44 90 chr10 112814868 112815257 -27501508 + L1M4 LINE L1 492 823 -5719 1408 237 100 2 chr10 112815253 112815713 -27501052 + L1M4 LINE L1 3035 3539 -3105 * 2113 251 82 13 chr10 112815727 112817057 -27499708 + L1ME1 LINE L1 1697 3089 -3126 1138 269 146 14 chr10 112817089 112817713 -27499052 + L1ME1 LINE L1 5426 6131 -104 274 368 23 0 chr10 112817811 112817898 -27498867 - MIR SINE MIR -131 131 43 1652 159 73 66 chr10 112818188 112818525 -27498240 + MLT2D LTR ERVL 1 343 -71 824 0 10 0 chr10 112818525 112818621 -27498144 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 1652 159 73 66 chr10 112818621 112818692 -27498073 + MLT2D LTR ERVL 343 412 -2 319 344 54 62 chr10 112818770 112819011 -27497754 - MIR SINE MIR -11 251 13 680 332 13 9 chr10 112819303 112819529 -27497236 - MIR SINE MIR -4 258 32 24 32 0 0 chr10 112819933 112819964 -27496801 + AT_rich Low_complexity Low_complexity 1 31 0 236 410 0 32 chr10 112820638 112820733 -27496032 + MER91A DNA MER1_type 18 109 -87 1423 184 18 0 chr10 112820774 112821051 -27495714 - L1PB4 LINE L1 -1 6155 5874 222 222 0 19 chr10 112821221 112821275 -27495490 + CT-rich Low_complexity Low_complexity 2 54 0 16153 156 36 31 chr10 112824155 112826576 -27490189 + Tigger3(Golem) DNA MER2_type 1 2409 -620 1852 111 3 59 chr10 112826576 112826883 -27489882 + AluSc SINE Alu 1 290 -19 16153 156 36 31 chr10 112826883 112827140 -27489625 + Tigger3(Golem) DNA MER2_type 2409 2663 -366 195 42 0 0 chr10 112827140 112827164 -27489601 + (CTCA)n Simple_repeat Simple_repeat 1 24 0 16153 156 36 31 chr10 112827164 112827498 -27489267 + Tigger3(Golem) DNA MER2_type 2663 3028 -1 2643 232 6 9 chr10 112827741 112828276 -27488489 - MER74A LTR ERVL 0 558 26 293 311 39 10 chr10 112828361 112828464 -27488301 - MIR SINE MIR -67 195 90 558 311 78 8 chr10 112829008 112829252 -27487513 + MIR SINE MIR 2 262 0 180 179 0 0 chr10 112829375 112829414 -27487351 + CT-rich Low_complexity Low_complexity 3 41 0 281 285 108 13 chr10 112829779 112829937 -27486828 - L1MC/D LINE L1 -2077 5731 5559 22 35 0 0 chr10 112830438 112830467 -27486298 + AT_rich Low_complexity Low_complexity 1 29 0 296 316 29 65 chr10 112831078 112831217 -27485548 - MIR3 SINE MIR -64 144 11 596 14 14 0 chr10 112831487 112831560 -27485205 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 2620 58 0 0 chr10 112831714 112832024 -27484741 + AluY SINE Alu 1 310 -1 1059 214 35 8 chr10 112832402 112832659 -27484106 - L1 LINE L1 -2321 3825 3562 5363 178 31 33 chr10 112832678 112834692 -27482073 - L1MA4 LINE L1 -11 6289 4281 894 269 134 11 chr10 112834717 112835383 -27481382 + L1MB8 LINE L1 2637 3384 -2762 2998 204 38 58 chr10 112835527 112836376 -27480389 + L1MB8 LINE L1 5283 6114 -64 33 0 0 0 chr10 112836400 112836433 -27480332 + AT_rich Low_complexity Low_complexity 1 33 0 1909 205 17 12 chr10 112836461 112836870 -27479895 + MLT2D LTR ERVL 4 414 0 1886 242 86 40 chr10 112836914 112837347 -27479418 + L1ME2 LINE L1 5170 5582 -582 1816 75 34 4 chr10 112837347 112837586 -27479179 + AluY SINE Alu 50 295 -16 1886 242 86 40 chr10 112837586 112838076 -27478689 + L1ME2 LINE L1 5582 6138 -26 34 42 0 0 chr10 112838548 112838596 -27478169 + AT_rich Low_complexity Low_complexity 1 48 0 1459 251 40 84 chr10 112839323 112840180 -27476585 - L1MC4 LINE L1 0 8042 7224 1535 198 0 26 chr10 112840802 112841115 -27475650 + AluJb SINE Alu 1 305 -7 2554 43 30 0 chr10 112841533 112841835 -27474930 - AluY SINE Alu 0 311 1 2476 53 17 0 chr10 112842838 112843138 -27473627 - AluY SINE Alu -6 305 1 528 287 98 53 chr10 112843768 112844228 -27472537 + L2 LINE L2 2779 3267 -5 302 305 0 0 chr10 112844627 112844709 -27472056 + GA-rich Low_complexity Low_complexity 3 84 0 187 299 37 56 chr10 112846794 112846901 -27469864 + L2 LINE L2 3191 3295 -18 595 278 6 40 chr10 112846955 112847128 -27469637 - MER5B DNA MER1_type 0 178 12 2117 118 16 0 chr10 112847437 112847741 -27469024 + AluSx SINE Alu 1 309 -3 189 121 0 0 chr10 112849328 112849361 -27467404 + (A)n Simple_repeat Simple_repeat 1 33 0 1926 170 7 73 chr10 112849402 112849814 -27466951 - MLT1B LTR MaLR 0 390 6 384 319 9 0 chr10 112850144 112850260 -27466505 - HERV16 LTR ERVL -795 4859 4743 834 318 80 51 chr10 112850305 112851063 -27465702 - HERV16 LTR ERVL -880 4401 3362 2019 327 31 15 chr10 112851459 112852238 -27464527 - HERV16 LTR ERVL -1909 3087 2297 421 247 0 41 chr10 112852248 112852345 -27464420 + MER96 DNA MER1_type? 78 170 -5 1834 331 78 33 chr10 112852353 112854461 -27462304 - HERV16 LTR ERVL -2715 2281 13 476 316 37 25 chr10 112854478 112854767 -27461998 - LTR16A LTR ERVL -6 444 120 235 280 110 42 chr10 112855087 112855205 -27461560 + MIR SINE MIR 49 174 -88 273 119 0 0 chr10 112856728 112856770 -27459995 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 367 335 86 10 chr10 112857050 112857259 -27459506 - MIR SINE MIR -26 236 12 711 247 72 74 chr10 112857371 112857748 -27459017 - LTR40b LTR ERVL 0 462 87 21 36 0 0 chr10 112857864 112857892 -27458873 + AT_rich Low_complexity Low_complexity 1 28 0 2294 99 0 0 chr10 112858405 112858697 -27458068 + AluY SINE Alu 12 303 -8 573 313 70 10 chr10 112860260 112860461 -27456304 - MIR SINE MIR -33 229 17 341 338 58 6 chr10 112861080 112861248 -27455517 - MIR SINE MIR -43 219 43 1640 297 43 6 chr10 112861432 112861967 -27454798 + MLT1H1 LTR MaLR 1 555 0 195 42 0 0 chr10 112862697 112862721 -27454044 + (CA)n Simple_repeat Simple_repeat 2 25 0 1365 204 31 81 chr10 112862872 112863109 -27453656 - MSTB1 LTR MaLR 0 432 226 2261 125 0 0 chr10 112863109 112863422 -27453343 - AluSq SINE Alu 0 313 1 1365 204 31 81 chr10 112863422 112863631 -27453134 - MSTB1 LTR MaLR -206 226 8 431 346 35 10 chr10 112863760 112863962 -27452803 + MIR SINE MIR 48 254 -8 1713 185 0 7 chr10 112864376 112864674 -27452091 - AluJo SINE Alu 0 312 17 2302 73 14 0 chr10 112865147 112865434 -27451331 + AluY SINE Alu 1 291 -20 420 333 157 19 chr10 112866114 112866273 -27450492 - MER91A DNA MER1_type -15 181 1 2230 110 3 0 chr10 112868437 112868747 -27448018 + AluY SINE Alu 1 311 0 364 357 33 0 chr10 112869106 112869288 -27447477 + MIR SINE MIR 45 232 -30 2940 75 59 12 chr10 112869321 112869699 -27447066 + MLT2A1 LTR ERVL 1 403 -41 312 27 0 0 chr10 112869699 112869736 -27447029 + (CA)n Simple_repeat Simple_repeat 2 38 0 2940 75 59 12 chr10 112869736 112869781 -27446984 + MLT2A1 LTR ERVL 403 444 0 17090 84 2 16 chr10 112869781 112872195 -27444570 + HERVL-A1 LTR ERVL 1 2381 -3273 3060 76 12 0 chr10 112872188 112872610 -27444155 + HERVL-A1 LTR ERVL 5228 5654 0 * 2883 101 11 33 chr10 112872610 112872759 -27444006 + MLT2A1 LTR ERVL 1 152 -292 2084 147 8 40 chr10 112872759 112873134 -27443631 - THE1B LTR MaLR 0 364 2 2883 101 11 33 chr10 112873134 112873438 -27443327 + MLT2A1 LTR ERVL 152 444 0 358 322 41 29 chr10 112874611 112874782 -27441983 + MIR SINE MIR 1 173 -89 183 80 0 0 chr10 112875096 112875121 -27441644 + (TCC)n Simple_repeat Simple_repeat 2 26 0 233 167 19 0 chr10 112875129 112875183 -27441582 + CT-rich Low_complexity Low_complexity 2 56 0 237 132 0 0 chr10 112875489 112875527 -27441238 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 364 192 13 0 chr10 112875560 112875638 -27441127 - HAL1b LINE L1 -278 1070 992 229 333 0 0 chr10 112876293 112876377 -27440388 + MIR SINE MIR 85 168 -94 35 24 0 0 chr10 112876381 112876423 -27440342 + AT_rich Low_complexity Low_complexity 1 42 0 1064 314 49 5 chr10 112877358 112877765 -27439000 - MER70A LTR ERVL -36 436 12 255 175 0 0 chr10 112877912 112877969 -27438796 + CT-rich Low_complexity Low_complexity 2 58 0 202 357 0 0 chr10 112878156 112878226 -27438539 - MER5A DNA MER1_type -113 76 7 1533 182 29 70 chr10 112878368 112878813 -27437952 + MER67D LTR ERV1 84 510 -4 425 364 23 0 chr10 112879047 112879176 -27437589 + L2 LINE L2 3116 3247 -25 2571 143 19 5 chr10 112879176 112879596 -27437169 - MSTA LTR MaLR -2 426 1 234 358 44 36 chr10 112879749 112879797 -27436968 + MIR3 SINE MIR 40 86 -122 2425 122 6 3 chr10 112879797 112880151 -27436614 - THE1A LTR MaLR 0 355 1 234 358 44 36 chr10 112880151 112880239 -27436526 + MIR3 SINE MIR 86 177 -31 1155 208 13 26 chr10 112881425 112881710 -27435055 + LTR1 LTR ERV1 2 249 -536 * 1740 196 74 3 chr10 112881703 112882055 -27434710 + LTR1B LTR ERV1 450 826 0 419 293 78 50 chr10 112882060 112882274 -27434491 + MIR SINE MIR 39 255 -7 2517 31 0 0 chr10 112883153 112883439 -27433326 - AluY SINE Alu -25 286 1 903 211 43 0 chr10 112883559 112883768 -27432997 - L1MB3 LINE L1 -8 6175 5958 322 306 38 44 chr10 112883795 112883978 -27432787 + L1MC4 LINE L1 5139 5320 -826 755 320 56 11 chr10 112884003 112884367 -27432398 + L1MC4 LINE L1 5347 5744 -2064 2408 77 7 0 chr10 112884367 112884667 -27432098 + AluSc SINE Alu 1 302 -7 755 320 56 11 chr10 112884667 112884837 -27431928 + L1MC4 LINE L1 5744 5905 -1903 27 0 0 0 chr10 112884876 112884903 -27431862 + AT_rich Low_complexity Low_complexity 1 27 0 1228 231 100 16 chr10 112885037 112885488 -27431277 + L1MC4 LINE L1 7186 7674 -368 332 251 32 16 chr10 112885534 112885721 -27431044 - L1M4 LINE L1 -822 5324 5135 1572 278 75 33 chr10 112885802 112887069 -27429696 - L1M4 LINE L1 -1546 4600 3281 21 36 0 0 chr10 112887199 112887227 -27429538 + AT_rich Low_complexity Low_complexity 1 28 0 3556 247 49 43 chr10 112888004 112888588 -27428177 + L1M4 LINE L1 3268 3847 -2299 2071 126 0 0 chr10 112888588 112888881 -27427884 + AluY SINE Alu 1 293 -18 3556 247 49 43 chr10 112888881 112889861 -27426904 + L1M4 LINE L1 3847 4841 -1305 219 239 0 0 chr10 112890026 112890093 -27426672 + G-rich Low_complexity Low_complexity 1 67 0 934 164 41 41 chr10 112890227 112890314 -27426451 - L1M4 LINE L1 -665 5513 5427 399 21 0 0 chr10 112890314 112890362 -27426403 + (TA)n Simple_repeat Simple_repeat 2 49 0 2457 64 0 19 chr10 112890364 112890676 -27426089 - AluY SINE Alu -5 306 1 934 164 41 41 chr10 112890676 112890804 -27425961 - L1M4 LINE L1 -751 5427 5295 715 215 11 23 chr10 112890817 112890994 -27425771 - AluSg/x SINE Alu -10 300 126 25 0 0 0 chr10 112891112 112891137 -27425628 + GC_rich Low_complexity Low_complexity 1 25 0 570 263 129 43 chr10 112891426 112891658 -27425107 + L2 LINE L2 2122 2373 -941 600 301 71 21 chr10 112892860 112893142 -27423623 + L2 LINE L2 2189 2484 -830 977 32 103 0 chr10 112893201 112893327 -27423438 + MER85 DNA T2_type 1 139 0 1011 191 30 82 chr10 112894624 112894990 -27421775 - Charlie2 DNA MER1_type -19 2843 2497 367 184 116 0 chr10 112895020 112895167 -27421598 - Charlie2 DNA MER1_type -443 2419 2256 510 240 0 8 chr10 112895172 112895301 -27421464 - AluJb SINE Alu -6 306 179 192 77 0 0 chr10 112895301 112895327 -27421438 + (T)n Simple_repeat Simple_repeat 1 26 0 316 331 39 0 chr10 112895688 112895818 -27420947 - L3 LINE CR1 -596 981 847 257 106 0 21 chr10 112895818 112895865 -27420900 - Charlie2 DNA MER1_type -756 2106 2061 184 340 82 0 chr10 112895958 112896055 -27420710 - L3 LINE CR1 -861 716 612 373 207 73 0 chr10 112896223 112896305 -27420460 + MIR SINE MIR 169 256 -6 474 251 40 40 chr10 112896329 112896552 -27420213 + Charlie2 DNA MER1_type 2 224 -2558 392 186 234 8 chr10 112896639 112896763 -27420002 + Charlie2 DNA MER1_type 1897 2048 -814 245 359 0 8 chr10 112897928 112898059 -27418706 + C-rich Low_complexity Low_complexity 3 132 0 6923 58 18 9 chr10 112898244 112899208 -27417557 + HERVH LTR ERV1 6742 7713 0 1336 67 5 10 chr10 112899208 112899416 -27417349 + LTR7 LTR ERV1 1 182 -268 7116 68 5 0 chr10 112899832 112900783 -27415982 + MER11C LTR ERVK 1 956 -115 26 30 0 0 chr10 112901403 112901436 -27415329 + AT_rich Low_complexity Low_complexity 1 33 0 214 191 21 0 chr10 112901478 112901525 -27415240 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 292 241 32 51 chr10 112901731 112901889 -27414876 - L1ME3A LINE L1 -221 5949 5795 276 267 69 26 chr10 112902499 112902615 -27414150 + MIR SINE MIR 129 249 -13 342 129 0 0 chr10 112902655 112902717 -27414048 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 1579 184 50 0 chr10 112902711 112903026 -27413739 - AluJb SINE Alu 0 345 17 737 235 77 32 chr10 112903247 112903468 -27413297 + Charlie8 DNA MER1_type 4 234 -2183 214 245 32 106 chr10 112904068 112904162 -27412603 - L2 LINE L2 -1 3312 3226 239 152 20 131 chr10 112904266 112904365 -27412400 + L1MA7 LINE L1 6201 6288 -3 233 289 44 22 chr10 112904436 112904526 -27412239 - L2 LINE L2 -213 3059 2968 2141 173 54 23 chr10 112904526 112905309 -27411456 + MER21B LTR ERV1 1 863 0 213 152 0 0 chr10 112905638 112905671 -27411094 - MIR SINE MIR -73 189 157 274 267 86 19 chr10 112905779 112905884 -27410881 - MIR SINE MIR -109 153 42 906 208 98 49 chr10 112905970 112906336 -27410429 + MLT1E2 LTR MaLR 1 384 -121 508 205 57 0 chr10 112906910 112907032 -27409733 + FLAM_A SINE Alu 14 142 0 1943 152 0 14 chr10 112907043 112907339 -27409426 + AluJb SINE Alu 1 292 -20 858 134 0 27 chr10 112907350 112907499 -27409266 + L1MB4 LINE L1 6034 6178 -2 191 231 13 39 chr10 112908317 112908473 -27408292 + CT-rich Low_complexity Low_complexity 4 155 0 1008 74 22 0 chr10 112908594 112908729 -27408036 - AluSp SINE Alu -175 138 1 21 36 0 0 chr10 112908736 112908764 -27408001 + AT_rich Low_complexity Low_complexity 1 28 0 313 273 32 39 chr10 112910716 112910870 -27405895 + L2 LINE L2 3161 3313 0 616 234 214 23 chr10 112910925 112911182 -27405583 + L1MC5 LINE L1 6656 6961 -1000 1314 129 47 168 chr10 112911205 112911545 -27405220 + AluJb SINE Alu 1 299 -3 229 336 51 15 chr10 112912350 112912487 -27404278 + L1P LINE L1 4904 5045 -1101 617 193 67 8 chr10 112912587 112912706 -27404059 + FLAM_C SINE Alu 2 127 -16 431 69 0 0 chr10 112912934 112912992 -27403773 - Alu SINE Alu -11 301 244 238 204 133 71 chr10 112913570 112913683 -27403082 + MIR SINE MIR 94 213 -49 195 333 41 34 chr10 112913864 112914011 -27402754 - L2 LINE L2 -8 3305 3158 2172 95 7 10 chr10 112914038 112914334 -27402431 + AluSq SINE Alu 1 295 -18 774 289 140 10 chr10 112914636 112915044 -27401721 + L2 LINE L2 2487 2947 -367 1156 257 60 11 chr10 112915517 112915954 -27400811 - L2 LINE L2 -353 2961 2439 1989 140 14 0 chr10 112916172 112916465 -27400300 - AluSx SINE Alu -9 303 7 433 266 96 23 chr10 112916638 112916815 -27399950 - MLT1K LTR MaLR 0 588 399 801 181 28 0 chr10 112917846 112917990 -27398775 - FRAM SINE Alu -4 172 25 1799 127 27 0 chr10 112918005 112918264 -27398501 - AluSx SINE Alu -46 266 1 1171 164 5 19 chr10 112918267 112918481 -27398284 - AluJo SINE Alu -100 212 2 2037 128 3 13 chr10 112918499 112918812 -27397953 - AluSx SINE Alu 0 312 3 1319 212 44 11 chr10 112919237 112919511 -27397254 + MER58B DNA MER1_type 10 292 -49 2220 101 0 13 chr10 112920101 112920399 -27396366 + AluSx SINE Alu 1 294 -18 1507 243 52 11 chr10 112921271 112921715 -27395050 - MLT1C LTR MaLR 0 467 6 406 111 0 0 chr10 112922007 112922070 -27394695 - Alu SINE Alu -1 308 246 35 24 0 0 chr10 112922486 112922528 -27394237 + AT_rich Low_complexity Low_complexity 1 42 0 1362 60 6 12 chr10 112922528 112922694 -27394071 - U1 snRNA snRNA 0 165 1 1643 195 3 3 chr10 112923417 112923715 -27393050 - AluJo SINE Alu -12 300 3 339 266 80 44 chr10 112923748 112923861 -27392904 - MIR SINE MIR -138 124 8 320 185 0 62 chr10 112923915 112924014 -27392751 - FLAM_A SINE Alu -24 109 34 796 258 168 48 chr10 112924658 112925034 -27391731 + MLT1L LTR MaLR 146 566 -49 225 333 29 20 chr10 112925078 112925180 -27391585 + L2 LINE L2 2188 2290 -1024 951 189 58 0 chr10 112925550 112925740 -27391025 + L1MB8 LINE L1 5382 5582 -596 986 188 18 0 chr10 112925744 112925914 -27390851 - AluJb SINE Alu -9 303 131 1364 228 106 10 chr10 112925917 112926303 -27390462 + L1MB8 LINE L1 5595 6017 -161 298 222 0 39 chr10 112926502 112926655 -27390110 + G-rich Low_complexity Low_complexity 4 150 0 2121 82 50 6 chr10 112926811 112927151 -27389614 + LTR7 LTR ERV1 94 448 -2 248 281 89 30 chr10 112927270 112927405 -27389360 - MER20B DNA MER1_type -613 170 28 * 534 235 287 31 chr10 112927387 112927774 -27388991 - LTR50 LTR ERVL -275 520 35 239 244 43 113 chr10 112927909 112927947 -27388818 + MIR SINE MIR 67 106 -156 1824 116 4 8 chr10 112927947 112928214 -27388551 - AluSg SINE Alu 0 310 45 239 244 43 113 chr10 112928214 112928290 -27388475 + MIR SINE MIR 106 173 -89 230 302 173 42 chr10 112928344 112928513 -27388252 + MIR SINE MIR 20 208 -54 2863 193 127 23 chr10 112928872 112929332 -27387433 - L1MD2 LINE L1 -333 6026 5615 2576 150 48 25 chr10 112929332 112929806 -27386959 - MER31A LTR ERV1 0 485 1 2863 193 127 23 chr10 112929806 112930298 -27386467 - L1MD2 LINE L1 -744 5615 5098 1224 164 70 59 chr10 112930293 112930579 -27386186 - L1MB7 LINE L1 -171 6013 5725 * 1785 166 3 29 chr10 112930891 112931198 -27385567 + AluJo SINE Alu 3 301 -11 2054 92 57 0 chr10 112931638 112931921 -27384844 + AluSg SINE Alu 1 299 -11 213 39 0 0 chr10 112932055 112932081 -27384684 + (TAA)n Simple_repeat Simple_repeat 2 27 0 227 261 22 65 chr10 112932160 112932252 -27384513 - MIR SINE MIR -24 238 151 270 230 35 35 chr10 112932256 112932343 -27384422 - L2 LINE L2 -5 3308 3222 1144 191 35 12 chr10 112932475 112932732 -27384033 - L1 LINE L1 -2543 3603 3341 2762 153 22 30 chr10 112932732 112933234 -27383531 + L1MB3 LINE L1 5682 6181 -2 664 305 78 67 chr10 112933400 112933862 -27382903 - HAL1 LINE L1 -1625 882 416 1057 151 129 18 chr10 112933905 112934177 -27382588 - MER33 DNA MER1_type -22 302 1 551 260 97 59 chr10 112934162 112934554 -27382211 - MLT1I LTR MaLR -2 407 1 * 2223 115 3 0 chr10 112935215 112935519 -27381246 + AluSg SINE Alu 1 305 -5 488 175 12 0 chr10 112936019 112936099 -27380666 + AluJ/FLAM SINE Alu 21 101 -211 2344 215 28 32 chr10 112936723 112937254 -27379511 + MER41D LTR ERV1 1 529 -28 26 50 0 0 chr10 112939061 112939101 -27377664 + AT_rich Low_complexity Low_complexity 1 40 0 200 231 15 31 chr10 112939905 112939970 -27376795 + GA-rich Low_complexity Low_complexity 1 64 0 1992 131 6 16 chr10 112940577 112940889 -27375876 + AluSx SINE Alu 3 311 -1 1296 262 41 26 chr10 112941066 112941597 -27375168 - L1MEd LINE L1 -2349 3780 3242 246 284 28 21 chr10 112942105 112942246 -27374519 + CT-rich Low_complexity Low_complexity 1 142 0 186 103 0 0 chr10 112942262 112942291 -27374474 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 1069 84 0 7 chr10 112942429 112942571 -27374194 + L1MA2 LINE L1 6158 6298 -6 21 36 0 0 chr10 112942575 112942603 -27374162 + AT_rich Low_complexity Low_complexity 1 28 0 365 191 0 86 chr10 112942682 112942787 -27373978 - L1MD2 LINE L1 -363 5996 5901 786 266 168 37 chr10 112942916 112943676 -27373089 - L1MEd LINE L1 -4345 1965 1073 301 373 84 29 chr10 112944622 112944933 -27371832 + L3 LINE CR1 1023 1350 -227 403 258 73 0 chr10 112945098 112945222 -27371543 - MLT2C1 LTR ERVL -264 133 1 704 230 104 7 chr10 112945222 112945492 -27371273 + L1M4 LINE L1 4929 5224 -922 326 248 124 18 chr10 112945509 112945622 -27371143 - MLT1F LTR MaLR 0 542 418 198 0 0 0 chr10 112945733 112945755 -27371010 + (TG)n Simple_repeat Simple_repeat 1 22 0 281 296 148 21 chr10 112946326 112946468 -27370297 + MIR SINE MIR 5 164 -98 206 322 0 0 chr10 112948751 112948810 -27367955 - L2 LINE L2 -5 3308 3250 273 182 182 0 chr10 112949238 112949315 -27367450 - L1MA9 LINE L1 -25 6287 6197 823 149 62 6 chr10 112949332 112949493 -27367272 - L1MA9 LINE L1 -232 6080 5911 199 273 13 65 chr10 112949980 112950057 -27366708 + MER5B DNA MER1_type 21 93 -85 2615 225 10 23 chr10 112951044 112951643 -27365122 + L1ME3 LINE L1 143 733 -5831 2411 219 35 36 chr10 112951707 112952088 -27364677 + L1MCa LINE L1 517 897 -5334 1625 101 70 49 chr10 112952088 112952375 -27364390 + L1PA10 LINE L1 5874 6166 -2 2411 219 35 36 chr10 112952375 112952884 -27363881 + L1MCa LINE L1 897 1380 -4851 216 339 0 0 chr10 112954758 112954814 -27361951 - MIR SINE MIR -60 148 93 409 264 97 79 chr10 112956041 112956207 -27360558 + MIR SINE MIR 13 186 -76 2314 107 0 0 chr10 112956207 112956505 -27360260 + AluSg SINE Alu 1 298 -12 409 264 97 79 chr10 112956505 112956565 -27360200 + MIR SINE MIR 186 243 -19 228 186 23 0 chr10 112956722 112956765 -27360000 + MIR SINE MIR 75 118 -144 1272 166 0 0 chr10 112957057 112957262 -27359503 + L1PA13 LINE L1 1 205 -6582 2160 189 58 37 chr10 112957270 112957704 -27359061 + L1PA13 LINE L1 443 885 -5902 24 32 0 0 chr10 112957917 112957948 -27358817 + AT_rich Low_complexity Low_complexity 1 31 0 296 241 184 0 chr10 112958782 112958923 -27357842 - L2 LINE L2 -12 3301 3135 22 0 0 0 chr10 112959014 112959036 -27357729 + AT_rich Low_complexity Low_complexity 1 22 0 530 297 106 26 chr10 112959341 112959887 -27356878 + L1ME3 LINE L1 1025 1614 -5131 313 264 74 83 chr10 112959936 112959987 -27356778 + L1ME3 LINE L1 1690 1740 -4824 1840 150 10 10 chr10 112959987 112960308 -27356457 + AluSx SINE Alu 1 312 0 313 264 74 83 chr10 112960308 112960472 -27356293 + L1ME3 LINE L1 1740 1903 -4661 28 29 0 0 chr10 112962514 112962549 -27354216 + AT_rich Low_complexity Low_complexity 1 35 0 282 300 0 0 chr10 112962549 112962639 -27354126 - L1 LINE L1 -2368 3778 3689 244 108 0 0 chr10 112963573 112963610 -27353155 - L1MA9 LINE L1 -67 6245 6209 426 132 13 0 chr10 112963613 112963689 -27353076 + L1MA9 LINE L1 6236 6312 0 315 0 0 0 chr10 112964054 112964089 -27352676 + (CA)n Simple_repeat Simple_repeat 2 36 0 1577 107 5 0 chr10 112964354 112964569 -27352196 - AluSx SINE Alu -40 272 57 439 267 0 0 chr10 112964659 112964779 -27351986 - L1PA16 LINE L1 -1 6165 6046 577 135 0 10 chr10 112966124 112966220 -27350545 + AluS SINE Alu 1 95 -218 497 83 0 60 chr10 112966359 112966443 -27350322 + AluSg/x SINE Alu 175 253 -57 780 262 144 62 chr10 112967024 112967342 -27349423 + L1ME3 LINE L1 3836 4127 -2437 1942 137 0 29 chr10 112967342 112967648 -27349117 - AluSx SINE Alu -15 297 1 780 262 144 62 chr10 112967648 112968199 -27348566 + L1ME3 LINE L1 4127 4776 -1788 715 241 138 40 chr10 112968211 112968560 -27348205 + L1ME3 LINE L1 6174 6556 -24 1746 186 7 61 chr10 112968561 112968970 -27347795 - MLT1B LTR MaLR 0 390 4 889 313 26 57 chr10 112969052 112969548 -27347217 - L2 LINE L2 -1229 2085 1605 895 161 56 29 chr10 112969553 112969747 -27347018 + L1M3 LINE L1 5463 5668 -512 33 0 0 0 chr10 112970519 112970552 -27346213 + AT_rich Low_complexity Low_complexity 1 33 0 3763 190 19 6 chr10 112970830 112971631 -27345134 + L1 LINE L1 4143 4953 -1193 290 325 41 68 chr10 112972095 112972390 -27344375 + L1MC/D LINE L1 5530 5816 -1992 180 152 0 0 chr10 112972476 112972509 -27344256 + (CATA)n Simple_repeat Simple_repeat 4 36 0 22 0 0 0 chr10 112972518 112972540 -27344225 + AT_rich Low_complexity Low_complexity 1 22 0 24 77 0 0 chr10 112972710 112972762 -27344003 + AT_rich Low_complexity Low_complexity 1 52 0 422 266 16 72 chr10 112973479 112973699 -27343066 - L1MEc LINE L1 -3692 2437 2239 1638 74 9 5 chr10 112973699 112973914 -27342851 - AluY SINE Alu -15 296 81 422 266 16 72 chr10 112973914 112974012 -27342753 - L1MEc LINE L1 -3890 2239 2137 215 366 60 34 chr10 112974765 112975000 -27341765 + MIR SINE MIR 22 262 0 2056 137 0 16 chr10 112975652 112975967 -27340798 - AluSx SINE Alu 0 312 3 382 312 163 47 chr10 112976525 112977015 -27339750 + L3 LINE CR1 1022 1568 -9 295 266 28 37 chr10 112977249 112977358 -27339407 + MER5A DNA MER1_type 80 187 -2 350 270 54 45 chr10 112977700 112977811 -27338954 + MER5B DNA MER1_type 1 112 -66 569 231 49 21 chr10 112978826 112978969 -27337796 - MIR SINE MIR -13 249 103 455 187 15 15 chr10 112979813 112979947 -27336818 + CT-rich Low_complexity Low_complexity 2 135 0 225 154 0 0 chr10 112979952 112979991 -27336774 + C-rich Low_complexity Low_complexity 4 42 0 306 362 0 0 chr10 112979994 112980088 -27336677 + polypyrimidine Low_complexity Low_complexity 3 96 0 1152 249 76 22 chr10 112980103 112980473 -27336292 - MLT1B LTR MaLR 0 390 1 279 310 74 22 chr10 112980783 112980912 -27335853 + MIR SINE MIR 7 140 -68 329 333 49 0 chr10 112981264 112981387 -27335378 + L2 LINE L2 3185 3313 0 229 320 50 0 chr10 112982389 112982489 -27334276 + L2 LINE L2 2600 2704 -610 428 312 140 62 chr10 112983057 112983845 -27332920 - L1MEc LINE L1 -4433 1877 1029 255 277 80 0 chr10 112983868 112983980 -27332785 - L1MEc LINE L1 -5101 1018 898 274 362 79 41 chr10 112984803 112985093 -27331672 + MLT1J LTR MaLR 104 404 -107 306 0 0 0 chr10 112985222 112985256 -27331509 + (T)n Simple_repeat Simple_repeat 1 34 0 372 43 0 0 chr10 112986049 112986095 -27330670 + (TG)n Simple_repeat Simple_repeat 1 46 0 233 229 0 16 chr10 112986624 112986685 -27330080 + (TTG)n Simple_repeat Simple_repeat 2 61 0 430 292 29 7 chr10 112986708 112986845 -27329920 + MIR SINE MIR 97 236 -26 205 105 53 0 chr10 112986916 112986954 -27329811 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 989 254 42 61 chr10 112987212 112987621 -27329144 - MER93a LTR ERV1 0 402 2 2074 100 3 24 chr10 112988034 112988324 -27328441 - AluSg SINE Alu -26 284 1 347 253 13 0 chr10 112990314 112990393 -27326372 + MIR SINE MIR 183 262 0 293 326 93 39 chr10 112990423 112990552 -27326213 - L2 LINE L2 -7 3306 3171 558 286 82 15 chr10 112990577 112990783 -27325982 - MIR SINE MIR -41 221 2 326 333 7 7 chr10 112991287 112991422 -27325343 + MLT1J2 LTR MaLR 42 176 -274 231 370 20 0 chr10 112991645 112991745 -27325020 - MLT1K LTR MaLR -325 263 162 196 342 13 0 chr10 112992823 112992899 -27323866 + L3 LINE CR1 1422 1498 -79 183 42 0 0 chr10 112992980 112993004 -27323761 + (TTA)n Simple_repeat Simple_repeat 1 24 0 285 226 0 0 chr10 112993101 112993163 -27323602 - MIR SINE MIR -51 211 150 348 24 0 0 chr10 112993165 112993206 -27323559 + (TATG)n Simple_repeat Simple_repeat 2 42 0 222 37 0 0 chr10 112993319 112993346 -27323419 + (CA)n Simple_repeat Simple_repeat 2 28 0 305 310 70 83 chr10 112993351 112993796 -27322969 - L1MC4 LINE L1 -145 7897 7459 2494 65 0 3 chr10 112994238 112994544 -27322221 + AluY SINE Alu 1 305 -6 23 0 0 0 chr10 112995079 112995102 -27321663 + AT_rich Low_complexity Low_complexity 1 23 0 29 110 0 0 chr10 112995288 112995415 -27321350 + AT_rich Low_complexity Low_complexity 1 127 0 2457 83 0 0 chr10 112995960 112996261 -27320504 - AluSg SINE Alu -5 305 5 3090 268 84 33 chr10 112996387 112998376 -27318389 + L1ME LINE L1 3425 5530 -640 1223 211 64 23 chr10 113000120 113000458 -27316307 + MLT1A1 LTR MaLR 11 463 -4 257 317 50 33 chr10 113001313 113001433 -27315332 + L2 LINE L2 2933 3054 -218 374 313 33 7 chr10 113001460 113001610 -27315155 - MER63A DNA MER1_type 0 210 57 229 247 27 14 chr10 113001817 113001890 -27314875 + GA-rich Low_complexity Low_complexity 2 75 0 529 261 97 49 chr10 113002440 113002666 -27314099 + MIR SINE MIR 16 252 -10 216 0 0 0 chr10 113003787 113003811 -27312954 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1679 172 55 33 chr10 113003836 113004202 -27312563 + THE1C LTR MaLR 1 374 -1 230 143 20 0 chr10 113005064 113005113 -27311652 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 2245 113 21 43 chr10 113005269 113005641 -27311124 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr10 113005676 113005697 -27311068 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 113006258 113006282 -27310483 + AT_rich Low_complexity Low_complexity 1 24 0 293 336 74 21 chr10 113006646 113006837 -27309928 - MIR SINE MIR -12 250 49 282 282 166 17 chr10 113007480 113007661 -27309104 - MIR SINE MIR -41 221 14 2062 141 0 0 chr10 113009080 113009393 -27307372 + AluSq SINE Alu 1 313 0 1080 143 46 0 chr10 113011725 113011900 -27304865 - L1PA15 LINE L1 0 6165 5983 8912 229 49 35 chr10 113011900 113015458 -27301307 - L1PA13 LINE L1 -3175 3622 1 592 308 44 74 chr10 113016116 113016522 -27300243 + L1MA9 LINE L1 399 792 -6774 1720 271 18 30 chr10 113016677 113017519 -27299246 + L1MA9 LINE L1 2275 3088 -4478 9903 240 40 33 chr10 113017532 113018735 -27298030 + L1MA9 LINE L1 3034 4227 -3504 228 67 0 0 chr10 113018735 113018765 -27298000 + (TA)n Simple_repeat Simple_repeat 2 31 0 1945 136 0 4 chr10 113018770 113019049 -27297716 - AluSg SINE Alu -32 278 1 9903 240 40 33 chr10 113019049 113022033 -27294732 + L1MA9 LINE L1 4230 7297 -434 1295 224 22 72 chr10 113022309 113022764 -27294001 + L1MA9 LINE L1 7293 7724 -7 661 299 152 15 chr10 113022776 113023382 -27293383 + L1M4 LINE L1 4464 5172 -974 1784 195 3 0 chr10 113023382 113023685 -27293080 + AluJb SINE Alu 1 304 -8 661 299 152 15 chr10 113023685 113023748 -27293017 + L1M4 LINE L1 5172 5225 -921 291 217 24 12 chr10 113024481 113024508 -27292257 + (TA)n Simple_repeat Simple_repeat 1 26 -58 198 0 0 0 chr10 113024508 113024530 -27292235 + (CA)n Simple_repeat Simple_repeat 2 23 0 291 217 24 12 chr10 113024530 113024585 -27292180 + (TA)n Simple_repeat Simple_repeat 26 84 0 287 181 43 21 chr10 113026102 113026196 -27290569 - L1ME LINE L1 -5240 830 735 192 250 94 0 chr10 113027745 113027809 -27288956 - L2 LINE L2 -60 3212 3143 383 261 64 64 chr10 113028085 113028242 -27288523 - MIR SINE MIR -30 232 76 1610 164 58 39 chr10 113029478 113029808 -27286957 + MER1B DNA MER1_type 2 337 0 243 195 12 134 chr10 113029966 113030048 -27286717 + L2 LINE L2 3200 3271 -1 1056 197 14 41 chr10 113030637 113030855 -27285910 + AluJo SINE Alu 1 212 -100 6771 174 7 27 chr10 113031014 113032229 -27284536 + L1PA13 LINE L1 1056 2245 -4542 548 332 20 15 chr10 113033938 113034137 -27282628 + MIR SINE MIR 2 201 -61 903 223 9 23 chr10 113034396 113034616 -27282149 + L1MA10 LINE L1 6089 6305 -29 1772 282 91 21 chr10 113034685 113036391 -27280374 - L1ME3 LINE L1 -9 6153 4323 366 270 9 0 chr10 113036588 113036703 -27280062 - L1ME3 LINE L1 -2160 3986 3871 22 0 0 0 chr10 113036929 113036951 -27279814 + AT_rich Low_complexity Low_complexity 1 22 0 427 275 18 18 chr10 113037073 113037240 -27279525 - L1ME3 LINE L1 -3134 3012 2846 3270 250 42 64 chr10 113037460 113039027 -27277738 + L1MDa LINE L1 185 2012 -4528 1615 211 60 13 chr10 113039034 113039488 -27277277 + L1MDa LINE L1 2082 2556 -3984 542 261 103 39 chr10 113039499 113039797 -27276968 + L1MDa LINE L1 2613 2939 -3601 2233 110 39 39 chr10 113039797 113040161 -27276604 - THE1B LTR MaLR 0 364 1 542 261 103 39 chr10 113040161 113040222 -27276543 + L1MDa LINE L1 2939 2995 -3545 401 108 128 98 chr10 113040228 113040330 -27276435 + L1MD1 LINE L1 6127 6231 -11 475 326 35 19 chr10 113040383 113040702 -27276063 - L1M4 LINE L1 -1366 4780 4457 1044 298 27 36 chr10 113040933 113041409 -27275356 - L2 LINE L2 -719 2595 2124 13950 225 23 12 chr10 113041650 113045220 -27271545 + L1PA13 LINE L1 1761 5373 -783 4123 155 8 7 chr10 113045897 113046607 -27270158 + L1PA13 LINE L1 5453 6163 0 316 239 228 8 chr10 113046709 113046846 -27269919 + MLT1G1 LTR MaLR 371 590 -5 418 317 94 103 chr10 113047379 113047856 -27268909 - L1ME LINE L1 -5488 582 110 4075 258 34 22 chr10 113048737 113050150 -27266615 - L1PA12 LINE L1 -3286 4298 2869 411 293 0 0 chr10 113050451 113050550 -27266215 - L1PA12 LINE L1 -5398 2183 2085 599 360 56 34 chr10 113050773 113051181 -27265584 - L1PA12 LINE L1 -6370 1204 788 988 221 67 16 chr10 113051198 113051510 -27265255 - L1MEc LINE L1 -3004 3211 2884 290 255 11 58 chr10 113051565 113051753 -27265012 + CT-rich Low_complexity Low_complexity 2 180 0 361 194 15 22 chr10 113051776 113051910 -27264855 + CT-rich Low_complexity Low_complexity 3 135 0 988 227 51 49 chr10 113052214 113052725 -27264040 - L1 LINE L1 -3506 2709 2198 2477 126 0 3 chr10 113052727 113053092 -27263673 + THE1B LTR MaLR 1 364 0 2702 109 122 19 chr10 113053092 113053561 -27263204 + THE1B-int LTR MaLR 1 517 -1063 1506 275 28 33 chr10 113054472 113055042 -27261723 - L1ME1 LINE L1 -30 6136 5570 296 267 76 19 chr10 113055056 113055161 -27261604 + MER58B DNA MER1_type 231 341 0 1284 271 56 31 chr10 113055161 113055682 -27261083 - L1MEc LINE L1 -3410 2805 2272 2652 190 34 44 chr10 113055682 113055742 -27261023 - L1MC2 LINE L1 -7 6337 6278 2426 176 9 22 chr10 113055752 113056202 -27260563 - LOR1b LTR ERV1 -17 444 1 2652 190 34 44 chr10 113056202 113057123 -27259642 - L1MC2 LINE L1 -66 6278 5406 327 256 65 48 chr10 113057093 113057261 -27259504 - L1MEc LINE L1 -4069 2327 2157 * 3927 127 8 25 chr10 113057277 113058102 -27258663 + L1MA2 LINE L1 5226 6007 -297 7088 126 22 3 chr10 113059125 113060182 -27256583 + THE1-int LTR MaLR 491 1567 -13 268 322 33 0 chr10 113061914 113062004 -27254761 + L1MCc LINE L1 1088 1180 -5243 1236 175 0 5 chr10 113062006 113062206 -27254559 - AluJb SINE Alu -107 205 7 597 261 87 57 chr10 113062211 113062922 -27253843 + L1MCc LINE L1 1288 2041 -4900 318 287 40 0 chr10 113062962 113063063 -27253702 + L1MCc LINE L1 2549 2653 -4469 2289 80 0 14 chr10 113063068 113063357 -27253408 + AluY SINE Alu 1 285 -26 1120 249 44 64 chr10 113063770 113064179 -27252586 + MER93a LTR ERV1 2 402 0 205 105 53 0 chr10 113064437 113064475 -27252290 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 197 315 43 11 chr10 113064595 113064687 -27252078 - MIR SINE MIR -70 192 98 207 139 0 0 chr10 113066762 113066798 -27249967 + (CGGGG)n Simple_repeat Simple_repeat 5 40 0 201 297 69 0 chr10 113067171 113067260 -27249505 - MIR SINE MIR -67 141 39 339 167 204 56 chr10 113067389 113067497 -27249268 - MIR SINE MIR -62 146 23 1211 51 0 0 chr10 113067609 113067746 -27249019 + AluY SINE Alu 1 137 -174 934 181 111 14 chr10 113071272 113071488 -27245277 + MIR SINE MIR 20 256 -6 2160 95 10 7 chr10 113073060 113073354 -27243411 - AluSp SINE Alu -18 295 1 1796 148 10 20 chr10 113074358 113074662 -27242103 - AluSg SINE Alu -9 301 1 270 0 0 0 chr10 113075285 113075315 -27241450 + (TG)n Simple_repeat Simple_repeat 2 31 0 1741 237 101 58 chr10 113075342 113076033 -27240732 + MER50 LTR ERV1 14 734 0 1729 219 99 8 chr10 113076641 113077033 -27239732 + MLT1D LTR MaLR 1 428 -77 471 35 0 0 chr10 113078102 113078159 -27238606 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 189 107 0 0 chr10 113078161 113078189 -27238576 + (GGAGA)n Simple_repeat Simple_repeat 5 32 0 21 0 0 0 chr10 113078210 113078231 -27238534 + AT_rich Low_complexity Low_complexity 1 21 0 4593 30 0 0 chr10 113080275 113080811 -27235954 - L1PA2 LINE L1 -1399 4747 4212 8210 22 0 1 chr10 113080811 113082216 -27234549 + L1PA2 LINE L1 4748 6151 -4 21 0 0 0 chr10 113082218 113082239 -27234526 + AT_rich Low_complexity Low_complexity 1 21 0 181 330 0 34 chr10 113082486 113082574 -27234191 - MER5A DNA MER1_type 0 189 105 276 295 39 31 chr10 113083442 113083571 -27233194 + MIR3 SINE MIR 6 135 -73 370 364 21 0 chr10 113083588 113083728 -27233037 - MIR SINE MIR -112 150 8 600 299 21 8 chr10 113084640 113084874 -27231891 - L1M4c LINE L1 -4588 2058 1822 2162 332 21 32 chr10 113084881 113085102 -27231663 - L1M4c LINE L1 -4988 1554 1332 1964 95 30 46 chr10 113085102 113085407 -27231358 - AluSq SINE Alu -13 300 1 2162 332 21 32 chr10 113085407 113085936 -27230829 - L1M4c LINE L1 -5210 1332 812 287 320 155 25 chr10 113087720 113087920 -27228845 - LTR50 LTR ERVL -569 226 1 209 179 0 0 chr10 113088175 113088214 -27228551 + (TG)n Simple_repeat Simple_repeat 1 39 0 825 259 97 92 chr10 113091007 113091397 -27225368 + MLT1E LTR MaLR 117 527 -59 198 0 0 0 chr10 113091399 113091421 -27225344 + (TG)n Simple_repeat Simple_repeat 1 22 0 2664 183 84 18 chr10 113091431 113091526 -27225239 - L1MB3 LINE L1 -8 6175 6088 2270 145 42 25 chr10 113091526 113091884 -27224881 + THE1B LTR MaLR 1 364 0 2664 183 84 18 chr10 113091884 113092346 -27224419 - L1MB3 LINE L1 -95 6088 5581 280 193 0 18 chr10 113092347 113092404 -27224361 + MLT1E LTR MaLR 483 538 -4 215 276 17 17 chr10 113092446 113092504 -27224261 - L2 LINE L2 -78 3194 3137 238 50 50 0 chr10 113092908 113092948 -27223817 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1646 151 82 10 chr10 113092950 113093241 -27223524 - AluSx SINE Alu 0 312 1 1802 118 93 4 chr10 113093706 113093985 -27222780 + AluSx SINE Alu 1 304 -8 283 250 15 0 chr10 113095732 113095864 -27220901 + (TA)n Simple_repeat Simple_repeat 2 135 0 235 224 0 82 chr10 113095864 113095962 -27220803 + L1MC4 LINE L1 6614 6703 -1339 282 56 0 0 chr10 113096036 113096072 -27220693 + (TA)n Simple_repeat Simple_repeat 2 37 0 220 200 0 0 chr10 113096552 113096597 -27220168 + (CA)n Simple_repeat Simple_repeat 2 46 0 256 324 22 107 chr10 113096883 113097284 -27219481 - L2 LINE L2 -385 2929 2563 769 213 39 29 chr10 113097285 113097492 -27219273 - MLT1D LTR MaLR 0 505 297 428 235 133 48 chr10 113097585 113097751 -27219014 + MER76 LTR ERV 509 688 0 693 0 0 0 chr10 113097809 113097886 -27218879 + (AGATG)n Simple_repeat Simple_repeat 3 79 0 289 287 0 40 chr10 113098272 113098373 -27218392 - L2 LINE L2 -56 3257 3161 2287 97 0 44 chr10 113098750 113099069 -27217696 - AluSg SINE Alu -5 305 1 1243 181 82 0 chr10 113099069 113099301 -27217464 + MER45B DNA AcHobo 570 820 -220 387 271 93 0 chr10 113099385 113099514 -27217251 + MIR SINE MIR 106 246 -16 297 0 0 0 chr10 113099557 113099590 -27217175 + (ATG)n Simple_repeat Simple_repeat 2 34 0 2140 92 0 0 chr10 113101263 113101535 -27215230 - AluY SINE Alu -14 297 26 2343 165 57 20 chr10 113101698 113102105 -27214660 + MSTB LTR MaLR 1 422 -4 2187 228 33 0 chr10 113102136 113102566 -27214199 - MLT2B1 LTR ERVL -74 446 3 403 227 0 14 chr10 113103076 113103217 -27213548 + (TA)n Simple_repeat Simple_repeat 1 139 0 201 359 22 43 chr10 113103698 113103790 -27212975 + MIR SINE MIR 33 122 -140 297 252 71 55 chr10 113103791 113103918 -27212847 + MIR SINE MIR 88 216 -46 2002 154 0 0 chr10 113103942 113104290 -27212475 - AluSx SINE Alu 0 348 1 2102 114 7 0 chr10 113104351 113104682 -27212083 - AluSp SINE Alu 0 333 1 1978 131 78 9 chr10 113104704 113105024 -27211741 + MER61A LTR ERV1 1 342 -1 572 95 0 0 chr10 113105193 113105267 -27211498 + AluSp/q SINE Alu 220 293 -20 302 330 44 0 chr10 113107890 113107981 -27208784 - MIR3 SINE MIR -7 201 107 862 193 117 114 chr10 113108379 113108731 -27208034 - MLT1A1 LTR MaLR -12 353 1 304 93 0 0 chr10 113108744 113108785 -27207980 - MADE1 DNA Mariner -1 79 39 1733 200 47 17 chr10 113108785 113109218 -27207547 + LTR10B LTR ERV1 1 533 -14 457 260 119 31 chr10 113110315 113110542 -27206223 - LTR41 LTR ERVL -191 582 336 339 268 70 64 chr10 113110608 113110765 -27206000 - LTR41 LTR ERVL -596 177 20 244 348 22 0 chr10 113110845 113110937 -27205828 + L2 LINE L2 2313 2406 -908 258 333 0 0 chr10 113111058 113111127 -27205638 + L2 LINE L2 3203 3271 -1 252 290 32 21 chr10 113111133 113111226 -27205539 + MLT1D LTR MaLR 1 94 -411 225 284 147 39 chr10 113111226 113111328 -27205437 + MER77 LTR ERV1 54 166 -439 922 247 81 32 chr10 113111547 113111830 -27204935 + MER77 LTR ERV1 303 599 -6 347 262 49 16 chr10 113111905 113112027 -27204738 + MLT1D LTR MaLR 72 197 -308 304 316 131 18 chr10 113112898 113113066 -27203699 + MLT1J2 LTR MaLR 130 316 -134 608 360 29 0 chr10 113114498 113114740 -27202025 - MIR SINE MIR -12 250 2 3839 65 2 0 chr10 113114802 113115296 -27201469 - L1PA7 LINE L1 0 6154 5660 565 72 0 0 chr10 113115304 113115394 -27201371 + L1PA7 LINE L1 5597 5686 -470 21 36 0 0 chr10 113115505 113115533 -27201232 + AT_rich Low_complexity Low_complexity 1 28 0 899 240 10 5 chr10 113116215 113116415 -27200350 + LTR16B LTR ERVL 261 461 -3 1014 154 86 43 chr10 113116765 113116999 -27199766 + L1MA9 LINE L1 6064 6307 -5 2487 197 32 28 chr10 113117850 113118683 -27198082 - L1M3 LINE L1 -377 5794 4963 1245 251 35 26 chr10 113118700 113119047 -27197718 + MLT1A1 LTR MaLR 16 365 0 3300 242 60 21 chr10 113119048 113120130 -27196635 - L1M3 LINE L1 -1182 4964 3841 1343 261 3 114 chr10 113120154 113120488 -27196277 - L1MA2 LINE L1 0 6304 6008 1782 248 38 13 chr10 113120493 113120710 -27196055 - L1M3 LINE L1 -2291 3855 3645 1724 186 0 0 chr10 113120710 113121000 -27195765 + AluSq SINE Alu 7 296 -17 1782 248 38 13 chr10 113121000 113121335 -27195430 - L1M3 LINE L1 -2501 3645 3289 16765 106 4 8 chr10 113121451 113122060 -27194705 - L1PA7 LINE L1 0 6154 5544 2214 115 0 0 chr10 113122060 113122348 -27194417 + AluSx SINE Alu 1 288 -24 16765 106 4 8 chr10 113122348 113125099 -27191666 - L1PA7 LINE L1 -610 5544 2827 1182 21 0 14 chr10 113125105 113125248 -27191517 - L1PA3 LINE L1 -3 6152 6012 5186 25 6 0 chr10 113125350 113125983 -27190782 - L1P LINE L1 -1254 4892 4256 227 69 0 0 chr10 113125984 113126013 -27190752 - L1PA7 LINE L1 -5289 857 829 * 11827 142 34 37 chr10 113126011 113128937 -27187828 - L1P3 LINE L1 -3310 3151 114 2248 103 9 3 chr10 113129039 113129359 -27187406 - L1P3 LINE L1 -6139 322 1 10098 221 46 28 chr10 113129360 113131089 -27185676 - L1M4 LINE L1 -2842 3540 1845 207 0 0 0 chr10 113131089 113131112 -27185653 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 10098 221 46 28 chr10 113131112 113132640 -27184125 - L1M4 LINE L1 -4537 1845 210 1712 187 0 20 chr10 113132640 113132940 -27183825 + AluJb SINE Alu 19 312 0 10098 221 46 28 chr10 113132940 113133128 -27183637 - L1M4 LINE L1 -6172 210 27 577 294 80 26 chr10 113134372 113134677 -27182088 + L1ME3A LINE L1 5511 5829 -341 331 202 17 0 chr10 113134894 113135013 -27181752 + (TA)n Simple_repeat Simple_repeat 2 122 0 1952 145 0 101 chr10 113135095 113135351 -27181414 - MER7A DNA MER2_type -2693 345 141 1448 176 92 0 chr10 113135351 113135612 -27181153 + AluJb SINE Alu 4 288 -24 1952 145 0 101 chr10 113135612 113135741 -27181024 - MER7A DNA MER2_type -2897 141 1 206 225 12 88 chr10 113136964 113137044 -27179721 - MIR SINE MIR -85 177 104 275 222 14 0 chr10 113137138 113137210 -27179555 + (CA)n Simple_repeat Simple_repeat 1 73 0 393 279 58 0 chr10 113137548 113137702 -27179063 + MER103 DNA DNA 3 165 -1 319 282 0 13 chr10 113137752 113137830 -27178935 - MIR3 SINE MIR -51 157 81 230 224 30 0 chr10 113138001 113138068 -27178697 + (TA)n Simple_repeat Simple_repeat 2 70 0 190 325 12 38 chr10 113138281 113138361 -27178404 - MIR3 SINE MIR -3 205 128 2128 160 5 32 chr10 113139249 113139623 -27177142 + THE1B LTR MaLR 1 364 0 11540 98 4 1 chr10 113139623 113141198 -27175567 + THE1B-int LTR MaLR 1 1580 0 2241 116 5 67 chr10 113141198 113141382 -27175383 + THE1B LTR MaLR 1 150 -214 2285 115 0 0 chr10 113141382 113141694 -27175071 + AluSx SINE Alu 1 312 0 2241 116 5 67 chr10 113141694 113141897 -27174868 + THE1B LTR MaLR 150 364 0 182 286 18 0 chr10 113144205 113144261 -27172504 - MIR SINE MIR -49 213 157 439 326 52 21 chr10 113144616 113144809 -27171956 + MIR SINE MIR 59 257 -5 272 177 25 38 chr10 113145784 113145863 -27170902 + (TAAA)n Simple_repeat Simple_repeat 4 81 0 27 29 0 0 chr10 113145888 113145922 -27170843 + AT_rich Low_complexity Low_complexity 1 34 0 2387 182 54 5 chr10 113146124 113146569 -27170196 + MLT1C LTR MaLR 1 467 0 2234 107 7 3 chr10 113147058 113147366 -27169399 + AluSc SINE Alu 1 309 0 3349 178 78 46 chr10 113147913 113148217 -27168548 - L1MB3 LINE L1 -8 6175 5882 2177 125 0 6 chr10 113148217 113148529 -27168236 - AluSq SINE Alu -3 310 1 3349 178 78 46 chr10 113148529 113149055 -27167710 - L1MB3 LINE L1 -301 5882 5318 21 89 0 0 chr10 113149976 113150032 -27166733 + AT_rich Low_complexity Low_complexity 1 56 0 2295 108 0 0 chr10 113150761 113151067 -27165698 - AluSg SINE Alu -4 306 1 193 345 118 0 chr10 113151177 113151287 -27165478 + MIR SINE MIR 138 260 -2 925 185 6 14 chr10 113151834 113152147 -27164618 - MLT1A1 LTR MaLR 0 365 3 345 257 22 88 chr10 113152287 113152423 -27164342 + L1ME LINE L1 771 897 -5633 245 169 28 70 chr10 113152494 113152565 -27164200 + L1ME LINE L1 874 941 -5589 267 113 52 35 chr10 113152787 113152902 -27163863 + (TTATA)n Simple_repeat Simple_repeat 1 117 0 432 291 89 39 chr10 113152936 113153317 -27163448 + L1ME LINE L1 1095 1494 -5049 256 265 74 55 chr10 113153322 113153738 -27163027 + L1ME LINE L1 1747 2171 -4369 24 77 0 0 chr10 113153784 113153836 -27162929 + AT_rich Low_complexity Low_complexity 1 52 0 1145 282 65 31 chr10 113153851 113154768 -27161997 + L1ME LINE L1 2393 3329 -3211 286 200 0 0 chr10 113154778 113154833 -27161932 - Charlie1 DNA MER1_type -2659 102 48 219 331 60 13 chr10 113155160 113155311 -27161454 - MIR SINE MIR -46 216 59 33 25 0 0 chr10 113155563 113155603 -27161162 + AT_rich Low_complexity Low_complexity 1 40 0 403 269 96 32 chr10 113156682 113156901 -27159864 - L1ME3A LINE L1 -10 6160 5928 506 308 29 50 chr10 113156916 113157156 -27159609 - L1ME3A LINE L1 -317 5853 5619 25 51 0 0 chr10 113157329 113157368 -27159397 + AT_rich Low_complexity Low_complexity 1 39 0 2496 115 29 0 chr10 113157569 113157952 -27158813 - L1PA16 LINE L1 -5 6161 5768 518 289 103 41 chr10 113157981 113158729 -27158036 - L1ME3A LINE L1 -1282 4864 4071 24 32 0 0 chr10 113158779 113158810 -27157955 + AT_rich Low_complexity Low_complexity 1 31 0 1477 132 25 30 chr10 113158859 113158991 -27157774 + AluSx SINE Alu 3 135 -177 2104 123 0 23 chr10 113158991 113159300 -27157465 + AluSg SINE Alu 1 302 -8 1477 132 25 30 chr10 113159300 113159402 -27157363 + AluSx SINE Alu 135 236 -76 387 0 0 0 chr10 113160243 113160286 -27156479 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 0 0 0 chr10 113161034 113161056 -27155709 + AT_rich Low_complexity Low_complexity 1 22 0 267 189 11 67 chr10 113161474 113161564 -27155201 - MER69 DNA AcHobo -13 2513 2429 264 164 18 18 chr10 113161619 113161674 -27155091 - MER69 DNA AcHobo -1153 73 19 704 44 35 18 chr10 113162139 113162252 -27154513 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 21 36 0 0 chr10 113163422 113163450 -27153315 + AT_rich Low_complexity Low_complexity 1 28 0 188 0 74 0 chr10 113163485 113163512 -27153253 + (TCTA)n Simple_repeat Simple_repeat 1 29 0 1285 241 103 50 chr10 113163883 113164339 -27152426 - MLT1E LTR MaLR -41 552 73 1101 168 5 5 chr10 113164339 113164547 -27152218 + L1MA10 LINE L1 6127 6334 0 252 83 14 69 chr10 113165339 113165411 -27151354 + (TA)n Simple_repeat Simple_repeat 2 69 0 304 397 16 0 chr10 113165694 113165820 -27150945 - L2 LINE L2 -2 3270 3143 206 378 13 39 chr10 113166021 113166177 -27150588 - L2 LINE L2 -410 2904 2753 24 0 0 0 chr10 113167003 113167027 -27149738 + AT_rich Low_complexity Low_complexity 1 24 0 2628 3 0 0 chr10 113167117 113167469 -27149296 + AluYa5 SINE Alu 1 352 0 22 56 0 0 chr10 113168319 113168355 -27148410 + AT_rich Low_complexity Low_complexity 1 36 0 226 273 0 15 chr10 113168389 113168455 -27148310 - MIR SINE MIR -51 211 147 3901 148 20 0 chr10 113169104 113169764 -27147001 - L1PA14 LINE L1 0 6161 5489 4178 156 18 10 chr10 113169766 113170698 -27146067 + L1PA14 LINE L1 4549 5485 -683 1233 199 3 70 chr10 113170721 113171046 -27145719 + AluJo SINE Alu 1 305 0 2186 125 14 8 chr10 113171182 113171535 -27145230 + THE1A LTR MaLR 1 355 0 9373 116 1 2 chr10 113171535 113172849 -27143916 + THE1A-int LTR MaLR 1 1312 -268 238 399 46 6 chr10 113172977 113173150 -27143615 - L2 LINE L2 -541 2773 2594 1071 128 26 0 chr10 113173171 113173327 -27143438 - THE1C LTR MaLR -215 160 1 9916 115 47 9 chr10 113173327 113174849 -27141916 - THE1C-int LTR MaLR 0 1580 1 1934 131 82 23 chr10 113174851 113175203 -27141562 - THE1C LTR MaLR -2 373 1 239 122 20 0 chr10 113175457 113175506 -27141259 + (TA)n Simple_repeat Simple_repeat 2 51 0 479 288 109 0 chr10 113176937 113177121 -27139644 + MIR3 SINE MIR 2 205 -3 473 301 90 7 chr10 113177350 113177565 -27139200 + MIR SINE MIR 16 243 -19 22 0 0 0 chr10 113177911 113177933 -27138832 + AT_rich Low_complexity Low_complexity 1 22 0 1698 55 0 18 chr10 113177949 113178166 -27138599 + AluY SINE Alu 99 311 0 21 0 0 0 chr10 113178654 113178675 -27138090 + AT_rich Low_complexity Low_complexity 1 21 0 324 217 0 0 chr10 113178991 113179051 -27137714 - Tigger5 DNA MER2_type 0 2323 2264 507 204 0 0 chr10 113179073 113179161 -27137604 + Tigger5 DNA MER2_type 1 88 -2235 326 148 0 19 chr10 113179163 113179217 -27137548 - Tigger5 DNA MER2_type -6 2317 2265 257 169 0 68 chr10 113179199 113179258 -27137507 - Tigger5 DNA MER2_type -2268 55 1 * 248 343 10 0 chr10 113179557 113179656 -27137109 - L2 LINE L2 -2 3311 3212 2283 92 13 3 chr10 113179705 113180009 -27136756 + AluY SINE Alu 1 307 -4 258 309 24 12 chr10 113180058 113180142 -27136623 + MIR SINE MIR 46 130 -132 286 314 20 0 chr10 113181225 113181327 -27135438 + MER5A DNA MER1_type 7 110 -79 512 301 33 0 chr10 113181390 113181543 -27135222 - MER5B DNA MER1_type -1 177 20 565 302 66 49 chr10 113181583 113181990 -27134775 + MLT1K LTR MaLR 169 582 -6 242 289 79 18 chr10 113182403 113182517 -27134248 - MER103 DNA DNA 0 166 46 859 261 114 12 chr10 113183890 113184215 -27132550 + L1ME3A LINE L1 5734 6091 -79 8110 54 117 6 chr10 113184370 113185488 -27131277 - L1P LINE L1 -4902 1244 3 1302 201 11 22 chr10 113185534 113185802 -27130963 + MER66B-int LTR ERV1 6829 7093 -1027 674 192 0 41 chr10 113185821 113185967 -27130798 + MER4D LTR ERV1 9 148 -755 12187 147 41 26 chr10 113185976 113188071 -27128694 + MER66B-int LTR ERV1 4551 6676 0 2582 174 49 6 chr10 113188071 113188537 -27128228 + MER66B LTR ERV1 1 486 0 22 0 0 0 chr10 113188692 113188714 -27128051 + AT_rich Low_complexity Low_complexity 1 22 0 2191 66 0 33 chr10 113189012 113189344 -27127421 + AluY SINE Alu 1 311 0 1265 234 75 111 chr10 113190319 113190852 -27125913 + MER67C LTR ERV1 1 514 0 809 188 234 0 chr10 113191060 113191328 -27125437 + MER33 DNA MER1_type 1 323 -1 510 317 62 5 chr10 113191466 113191674 -27125091 + MIR SINE MIR 20 239 -23 3076 312 39 16 chr10 113192184 113193398 -27123367 - ERVL LTR ERVL -493 5271 4031 528 274 54 27 chr10 113193833 113194056 -27122709 - ERVL LTR ERVL -4723 1041 813 268 386 13 0 chr10 113194109 113194262 -27122503 - ERVL LTR ERVL -5072 692 538 1199 305 66 48 chr10 113194734 113195337 -27121428 - MLT2E LTR ERVL -14 614 1 231 88 0 0 chr10 113195633 113195667 -27121098 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 271 259 24 12 chr10 113195712 113195797 -27120968 + GA-rich Low_complexity Low_complexity 3 88 0 375 303 81 33 chr10 113195822 113196093 -27120672 - HAL1 LINE L1 -897 1610 1327 1995 110 0 0 chr10 113196461 113196734 -27120031 - AluSc SINE Alu -2 307 35 8550 179 64 92 chr10 113197200 113200293 -27116472 - L1MCa LINE L1 -3401 3025 20 2712 180 56 29 chr10 113200481 113201104 -27115661 - L1MA8 LINE L1 -3 6288 5649 21 36 0 0 chr10 113201120 113201148 -27115617 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 113201508 113201536 -27115229 + AT_rich Low_complexity Low_complexity 1 28 0 2728 208 149 107 chr10 113201902 113203172 -27113593 + MER52A LTR ERV1 1 1323 -432 209 263 25 12 chr10 113203225 113203305 -27113460 + GA-rich Low_complexity Low_complexity 1 81 0 1426 249 78 32 chr10 113204282 113204756 -27112009 - MLT1D LTR MaLR -7 498 3 29 28 0 0 chr10 113204985 113205021 -27111744 + AT_rich Low_complexity Low_complexity 1 36 0 394 306 60 8 chr10 113205978 113206112 -27110653 - MIR SINE MIR -75 187 47 221 294 94 28 chr10 113206691 113206871 -27109894 - MIR SINE MIR -2 260 69 21 0 0 0 chr10 113210127 113210148 -27106617 + AT_rich Low_complexity Low_complexity 1 21 0 349 343 54 20 chr10 113210153 113210357 -27106408 + MIR SINE MIR 52 262 0 435 269 0 0 chr10 113210451 113210544 -27106221 - FLAM_A SINE Alu -49 93 1 698 160 154 0 chr10 113210934 113211090 -27105675 + MER67D LTR ERV1 12 191 -323 238 204 0 0 chr10 113211501 113211555 -27105210 + A-rich Low_complexity Low_complexity 4 57 0 417 363 70 52 chr10 113212679 113213239 -27103526 + MLT1K LTR MaLR 11 580 -8 247 350 31 31 chr10 113213261 113213455 -27103310 - LTR16C LTR ERVL 0 491 298 26 30 0 0 chr10 113216344 113216377 -27100388 + AT_rich Low_complexity Low_complexity 1 33 0 264 212 0 0 chr10 113216507 113216573 -27100192 + (TA)n Simple_repeat Simple_repeat 2 67 0 550 297 36 14 chr10 113216911 113217130 -27099635 + L1MEc LINE L1 1134 1357 -5468 232 262 16 0 chr10 113217130 113217191 -27099574 + (TATG)n Simple_repeat Simple_repeat 4 65 0 451 280 63 40 chr10 113217219 113217454 -27099311 + L1MEc LINE L1 1263 1608 -5037 228 276 86 57 chr10 113217532 113217811 -27098954 + L1MEc LINE L1 1785 2071 -4754 363 229 66 0 chr10 113217933 113217978 -27098787 - L1MA10 LINE L1 -2 6332 6288 315 295 30 24 chr10 113217978 113218144 -27098621 - L1ME1 LINE L1 -46 6120 5954 6081 109 5 24 chr10 113218175 113219197 -27097568 - L1MA3 LINE L1 -7 6298 5296 5496 189 4 37 chr10 113219193 113220035 -27096730 - L1M1 LINE L1 -5345 2220 1422 * 1773 132 106 18 chr10 113220035 113220376 -27096389 - THE1C LTR MaLR -4 371 1 5496 189 4 37 chr10 113220376 113220645 -27096120 - L1M1 LINE L1 -6143 1422 1146 22794 26 3 0 chr10 113220793 113224262 -27092503 + L1PA2 LINE L1 2525 6004 -151 1265 33 0 0 chr10 113224362 113224514 -27092251 + L1PA2 LINE L1 6004 6155 0 2643 172 41 12 chr10 113224520 113224768 -27091997 - MER66B-int LTR ERV1 -2368 4308 4069 1955 145 0 16 chr10 113224768 113225071 -27091694 - AluSx SINE Alu -14 298 1 2643 172 41 12 chr10 113225071 113225381 -27091384 - MER66B-int LTR ERV1 -2607 4069 3734 1830 107 4 0 chr10 113225388 113225630 -27091135 - AluSp SINE Alu -18 295 53 6158 216 14 21 chr10 113225633 113226237 -27090528 - MER66B-int LTR ERV1 -3027 3649 3042 2095 141 33 30 chr10 113226237 113226600 -27090165 + THE1B LTR MaLR 1 364 0 6158 216 14 21 chr10 113226600 113227322 -27089443 - MER66B-int LTR ERV1 -3634 3042 2332 3877 185 85 19 chr10 113227340 113228177 -27088588 - MER66B-int LTR ERV1 -4575 2101 1210 658 271 13 0 chr10 113228268 113228423 -27088342 - MER66B-int LTR ERV1 -3573 3103 2947 3234 202 43 50 chr10 113228518 113229553 -27087212 - MER66B-int LTR ERV1 -5573 1103 1 2614 169 8 19 chr10 113229553 113230038 -27086727 - MER66B LTR ERV1 0 486 7 412 200 9 29 chr10 113230440 113230545 -27086220 + MER4A LTR ERV1 1 103 -561 604 231 117 31 chr10 113230571 113230895 -27085870 + LTR34 LTR ERV1 109 460 -239 728 237 51 31 chr10 113230905 113231219 -27085546 + MER4C LTR ERV1 278 465 0 351 0 0 0 chr10 113231222 113231261 -27085504 + (TG)n Simple_repeat Simple_repeat 2 40 0 2108 117 3 0 chr10 113232724 113233049 -27083716 - AluSp SINE Alu 0 327 2 241 105 0 0 chr10 113233246 113233284 -27083481 - MLT2A2 LTR ERVL 0 453 416 * 441 82 0 0 chr10 113233273 113233334 -27083431 - MLT2A2 LTR ERVL -392 61 1 315 65 0 0 chr10 113233698 113233744 -27083021 + Alu SINE Alu 252 297 -3 189 196 0 0 chr10 113233805 113233856 -27082909 + A-rich Low_complexity Low_complexity 1 51 0 620 215 7 22 chr10 113233918 113234053 -27082712 + AluJo SINE Alu 1 133 -179 865 228 0 0 chr10 113234094 113234252 -27082513 + AluJo SINE Alu 131 288 -24 180 287 119 30 chr10 113235125 113235226 -27081539 + MIR SINE MIR 151 260 -2 380 230 16 76 chr10 113236031 113236198 -27080567 + L1ME LINE L1 5604 5735 -386 513 256 16 0 chr10 113236224 113236349 -27080416 - MER58B DNA MER1_type -11 330 204 2575 174 17 77 chr10 113236747 113237386 -27079379 - LTR9 LTR ERV1 -11 601 1 884 332 29 25 chr10 113237459 113237944 -27078821 + L1MCb LINE L1 77 563 -5482 717 194 5 43 chr10 113237993 113238179 -27078586 - MLT1C LTR MaLR -230 237 59 1538 202 100 69 chr10 113238242 113238870 -27077895 + L1MCb LINE L1 1101 1855 -4709 279 0 0 0 chr10 113238870 113238901 -27077864 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1538 202 100 69 chr10 113238901 113239102 -27077663 + L1MCb LINE L1 1855 2048 -4516 2500 221 11 88 chr10 113239107 113239922 -27076843 + L1MC3 LINE L1 6110 6861 -924 215 214 0 0 chr10 113239922 113239964 -27076801 + (CA)n Simple_repeat Simple_repeat 1 42 0 3293 199 26 23 chr10 113240203 113240819 -27075946 - L1MB1 LINE L1 -1 6167 5547 1151 238 99 22 chr10 113240819 113241184 -27075581 + MSTD LTR MaLR 4 396 0 3293 199 26 23 chr10 113241184 113241340 -27075425 - L1MB1 LINE L1 -621 5547 5393 279 0 0 0 chr10 113241343 113241374 -27075391 + (CA)n Simple_repeat Simple_repeat 2 32 0 2166 96 0 4 chr10 113242366 113242646 -27074119 - AluSx SINE Alu -33 279 1 2294 111 3 0 chr10 113243421 113243727 -27073038 + AluSg SINE Alu 1 307 -3 185 405 45 9 chr10 113243887 113243998 -27072767 - MIR SINE MIR -78 130 16 1835 166 3 3 chr10 113244251 113244558 -27072207 + AluJb SINE Alu 3 309 -3 208 255 78 0 chr10 113244576 113244627 -27072138 - L2 LINE L2 -5 3267 3213 206 366 75 0 chr10 113246005 113246098 -27070667 - MIR3 SINE MIR -96 112 13 978 213 118 32 chr10 113247196 113247511 -27069254 - MER2 DNA MER2_type 0 344 3 5151 168 41 18 chr10 113248033 113249143 -27067622 - L1MC1 LINE L1 0 6333 5195 322 354 21 35 chr10 113249196 113249340 -27067425 - MIR SINE MIR -114 148 7 547 310 6 35 chr10 113249602 113249773 -27066992 - MER5A DNA MER1_type 0 189 24 7670 116 80 73 chr10 113250941 113252658 -27064107 - pTR5 LTR ERV1 0 2438 382 1916 191 64 7 chr10 113252818 113253227 -27063538 - MSTB1 LTR MaLR 0 432 1 1653 199 3 3 chr10 113253255 113253552 -27063213 - AluJb SINE Alu -15 297 1 800 142 0 0 chr10 113254164 113254298 -27062467 + MLT2B2 LTR ERVL 3 136 -379 1286 225 175 0 chr10 113254394 113254679 -27062086 + MLT2B1 LTR ERVL 145 479 -41 2723 74 3 0 chr10 113254724 113255087 -27061678 + MLT2A1 LTR ERVL 3 366 -78 1261 191 85 4 chr10 113255118 113255390 -27061375 + MSTA LTR MaLR 135 428 0 1235 237 48 34 chr10 113255394 113255752 -27061013 + MLT1A1 LTR MaLR 3 365 0 201 224 0 0 chr10 113256223 113256281 -27060484 + CT-rich Low_complexity Low_complexity 2 59 0 1196 199 186 100 chr10 113257253 113257851 -27058914 - MLT1E3 LTR MaLR -5 619 1 545 299 22 0 chr10 113260054 113260191 -27056574 + MIR SINE MIR 50 189 -73 369 0 0 0 chr10 113260658 113260699 -27056066 + (TG)n Simple_repeat Simple_repeat 2 42 0 291 287 11 64 chr10 113260769 113260863 -27055902 + MIR SINE MIR 50 138 -70 479 231 131 19 chr10 113260899 113261059 -27055706 + MER5B DNA MER1_type 1 178 0 197 171 24 0 chr10 113261319 113261360 -27055405 - L2 LINE L2 -1 3312 3271 347 322 18 72 chr10 113262024 113262298 -27054467 + L2 LINE L2 2737 2992 -321 2288 98 0 7 chr10 113262298 113262603 -27054162 - AluSx SINE Alu -9 303 1 347 322 18 72 chr10 113262603 113262668 -27054097 + L2 LINE L2 2992 3059 -254 240 35 0 0 chr10 113262929 113262958 -27053807 + (TAA)n Simple_repeat Simple_repeat 1 29 0 2677 101 10 8 chr10 113263620 113264017 -27052748 + L1PB1 LINE L1 5385 5782 -369 332 148 11 34 chr10 113264024 113264112 -27052653 + (TA)n Simple_repeat Simple_repeat 1 86 0 241 104 21 0 chr10 113264114 113264162 -27052603 + LTR66 LTR ERVL 384 432 -178 444 137 11 21 chr10 113264174 113264269 -27052496 + (TA)n Simple_repeat Simple_repeat 1 94 0 2499 111 3 3 chr10 113264269 113264637 -27052128 + L1PB1 LINE L1 5782 6149 -2 2505 56 0 3 chr10 113264691 113264997 -27051768 + AluY SINE Alu 1 305 -6 448 320 107 0 chr10 113265142 113265292 -27051473 + MIR3 SINE MIR 31 196 -12 203 313 75 15 chr10 113265560 113265627 -27051138 - L3 LINE CR1 -8 1569 1499 207 0 0 0 chr10 113266290 113266313 -27050452 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1746 118 6 63 chr10 113266313 113266628 -27050137 - MER51A LTR ERV1 -70 564 268 212 340 0 0 chr10 113267904 113268004 -27048761 + T-rich Low_complexity Low_complexity 1 100 0 690 203 8 0 chr10 113268184 113268307 -27048458 + FLAM_A SINE Alu 1 124 -9 33 25 0 0 chr10 113268310 113268350 -27048415 + AT_rich Low_complexity Low_complexity 1 40 0 243 0 0 0 chr10 113269933 113269960 -27046805 + (TG)n Simple_repeat Simple_repeat 2 28 0 229 387 40 0 chr10 113270001 113270125 -27046640 - MIR SINE MIR -126 136 8 1860 217 21 0 chr10 113270486 113270860 -27045905 + MLT1B LTR MaLR 9 390 0 191 313 36 24 chr10 113272314 113272397 -27044368 - MIR SINE MIR -120 142 59 218 207 17 0 chr10 113273696 113273754 -27043011 + (TA)n Simple_repeat Simple_repeat 1 59 0 568 253 50 76 chr10 113274159 113274674 -27042091 - L1ME LINE L1 -509 6472 5970 682 261 39 72 chr10 113274682 113274782 -27041983 - L1ME1 LINE L1 -5 6161 6059 2218 88 0 7 chr10 113274782 113275088 -27041677 - AluY SINE Alu -7 304 1 682 261 39 72 chr10 113275088 113275320 -27041445 - L1ME1 LINE L1 -107 6059 5840 355 262 39 0 chr10 113275319 113275422 -27041343 - L1ME LINE L1 -2088 4869 4763 * 1460 238 59 40 chr10 113275435 113275919 -27040846 - L1ME1 LINE L1 -352 5814 5322 270 0 0 0 chr10 113275919 113275949 -27040816 + (TA)n Simple_repeat Simple_repeat 2 31 0 1460 238 59 40 chr10 113275949 113276195 -27040570 - L1ME1 LINE L1 -844 5322 5082 1702 256 105 41 chr10 113276255 113276441 -27040324 - L1ME1 LINE L1 -1997 4149 3976 1798 92 0 0 chr10 113276441 113276691 -27040074 - L1PA13 LINE L1 -19 6144 5895 1702 256 105 41 chr10 113276691 113276853 -27039912 - L1ME1 LINE L1 -2170 3976 3826 2266 101 0 0 chr10 113276853 113277151 -27039614 + AluSg SINE Alu 1 298 -12 1702 256 105 41 chr10 113277151 113277895 -27038870 - L1ME1 LINE L1 -2320 3826 2986 655 241 21 21 chr10 113277909 113278100 -27038665 + L1M4 LINE L1 2564 2754 -3392 2974 254 76 14 chr10 113278103 113279450 -27037315 - L1M4 LINE L1 -2953 4004 2616 1545 128 20 4 chr10 113279452 113279702 -27037063 - L1PA14 LINE L1 -3 6158 5905 13727 177 12 9 chr10 113279720 113282809 -27033956 - L1PA12 LINE L1 -3426 4158 1059 4079 95 37 10 chr10 113282809 113283398 -27033367 + LTR14B LTR ERVK 4 608 0 13727 177 12 9 chr10 113283398 113283469 -27033296 - L1PA12 LINE L1 -6525 1059 990 953 244 134 38 chr10 113283464 113284251 -27032514 - L1M4 LINE L1 -4836 2019 1216 * 309 283 52 23 chr10 113284254 113284427 -27032338 - L1M4 LINE L1 -5083 1772 1595 1802 176 32 3 chr10 113284644 113284957 -27031808 + MER1B DNA MER1_type 18 339 0 379 303 94 56 chr10 113285080 113285347 -27031418 - L1M4 LINE L1 -6027 832 556 182 304 36 0 chr10 113286663 113286719 -27030046 - L3b LINE CR1 -2 1581 1524 689 243 73 15 chr10 113286775 113287069 -27029696 - L1MC4a LINE L1 -70 7925 7439 330 275 115 86 chr10 113287857 113288126 -27028639 + L1M2 LINE L1 652 928 -5921 225 0 0 0 chr10 113289374 113289399 -27027366 + (T)n Simple_repeat Simple_repeat 1 25 0 218 250 160 60 chr10 113290721 113290821 -27025944 + MIR SINE MIR 37 146 -62 192 358 119 8 chr10 113292055 113292189 -27024576 - MIR SINE MIR -50 212 64 2137 112 14 7 chr10 113292641 113292936 -27023829 - AluSc SINE Alu -12 297 1 1981 148 0 10 chr10 113293556 113293861 -27022904 + AluSx SINE Alu 1 302 -10 212 265 44 0 chr10 113293996 113294064 -27022701 - L2 LINE L2 -14 3258 3188 424 237 71 71 chr10 113295867 113296036 -27020729 - MIR SINE MIR -40 222 54 231 288 15 30 chr10 113296788 113296854 -27019911 + MER5A DNA MER1_type 113 188 -1 532 303 105 21 chr10 113297071 113297309 -27019456 + MIR SINE MIR 5 262 0 23 0 0 0 chr10 113297365 113297388 -27019377 + AT_rich Low_complexity Low_complexity 1 23 0 206 234 0 0 chr10 113298293 113298340 -27018425 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 238 230 30 40 chr10 113298568 113298668 -27018097 + (CAGAGA)n Simple_repeat Simple_repeat 2 100 0 180 111 0 0 chr10 113298932 113298959 -27017806 + (TTTC)n Simple_repeat Simple_repeat 3 29 0 261 0 0 0 chr10 113299143 113299172 -27017593 + (A)n Simple_repeat Simple_repeat 1 29 0 1152 204 4 18 chr10 113299500 113299726 -27017039 + MER58A DNA MER1_type 1 223 -1 1680 210 8 37 chr10 113300383 113300759 -27016006 - MLT1A1 LTR MaLR 0 365 1 672 292 49 9 chr10 113303113 113303339 -27013426 + MIR SINE MIR 23 257 -5 338 279 25 33 chr10 113304135 113304257 -27012508 + MIR SINE MIR 33 153 -109 22 35 0 0 chr10 113304920 113304949 -27011816 + AT_rich Low_complexity Low_complexity 1 29 0 234 319 89 19 chr10 113305002 113305159 -27011606 - L1ME LINE L1 -200 5921 5754 893 235 98 64 chr10 113306881 113307559 -27009206 + L1MA9 LINE L1 2785 3436 -4129 903 245 0 0 chr10 113307559 113307743 -27009022 + MSTB1 LTR MaLR 1 184 -242 218 213 0 0 chr10 113307743 113307790 -27008975 + T-rich Low_complexity Low_complexity 1 47 0 1542 153 32 0 chr10 113308275 113308524 -27008241 + MSTB1 LTR MaLR 176 432 0 1221 200 69 67 chr10 113308524 113309030 -27007735 + L1MA9 LINE L1 3432 3951 -3614 7177 214 49 19 chr10 113309039 113312520 -27004245 + L1MA9 LINE L1 4117 7726 -5 1484 188 7 0 chr10 113314230 113314502 -27002263 - AluJb SINE Alu -38 274 1 302 225 158 7 chr10 113314584 113314724 -27002041 - MER34 LTR ERV1 -21 734 405 605 244 131 0 chr10 113314907 113315075 -27001690 - MER34C LTR ERV1 -373 212 23 1869 217 80 48 chr10 113315194 113315797 -27000968 - MER34C-int LTR ERV1 -202 4734 4113 11482 175 42 15 chr10 113315825 113318115 -26998650 - L1MA3 LINE L1 0 7724 5294 2155 146 39 3 chr10 113318115 113318477 -26998288 - THE1C LTR MaLR 0 375 1 11482 175 42 15 chr10 113318477 113319858 -26996907 - L1MA3 LINE L1 -2430 5294 3952 421 202 98 62 chr10 113320032 113320225 -26996540 - L1MA3 LINE L1 -3947 3618 3419 * 17738 199 42 6 chr10 113320199 113324252 -26992513 - L1 LINE L1 -3360 4205 11 5035 199 110 101 chr10 113324252 113325357 -26991408 - MER34C-int LTR ERV1 -810 4126 3032 6709 142 12 0 chr10 113325357 113326057 -26990708 - L1PA10 LINE L1 -4 6164 5474 2019 115 0 26 chr10 113326057 113326369 -26990396 + AluSc SINE Alu 1 304 -5 6709 142 12 0 chr10 113326369 113327610 -26989155 - L1PA10 LINE L1 -694 5474 4220 5035 199 110 101 chr10 113327610 113329277 -26987488 - MER34C-int LTR ERV1 -1904 3032 1330 352 147 121 108 chr10 113329311 113329468 -26987297 - MER34C-int LTR ERV1 -3735 1201 1043 191 36 36 0 chr10 113329556 113329584 -26987181 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 1736 258 101 62 chr10 113330748 113331968 -26984797 - MER34C-int LTR ERV1 -5179 1152 48 2235 91 13 3 chr10 113332079 113332387 -26984378 - AluY SINE Alu 0 311 1 2192 127 0 0 chr10 113332389 113332697 -26984068 - AluSx SINE Alu -4 308 1 227 320 152 8 chr10 113333231 113333356 -26983409 - MER102b DNA MER1_type -22 319 177 749 250 78 81 chr10 113333414 113333826 -26982939 + MLT1H LTR MaLR 137 542 0 246 301 0 0 chr10 113333971 113334044 -26982721 - HsTC2 DNA Tc2 -1795 103 31 573 15 0 0 chr10 113334765 113334831 -26981934 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 661 303 4 34 chr10 113335274 113335512 -26981253 - MIR SINE MIR -1 261 31 268 189 57 0 chr10 113336397 113336450 -26980315 - L1MA7 LINE L1 -88 6203 6148 233 204 41 20 chr10 113336483 113336581 -26980184 + (TATAA)n Simple_repeat Simple_repeat 3 102 0 203 243 7 0 chr10 113336585 113336737 -26980028 + (TA)n Simple_repeat Simple_repeat 2 154 0 367 182 47 0 chr10 113336793 113336963 -26979802 + (TA)n Simple_repeat Simple_repeat 2 179 0 405 0 0 0 chr10 113337205 113337250 -26979515 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 70 0 0 chr10 113338430 113338473 -26978292 + AT_rich Low_complexity Low_complexity 1 43 0 684 266 41 35 chr10 113338523 113338839 -26977926 + L1ME3A LINE L1 5799 6116 -54 441 293 17 9 chr10 113338942 113339058 -26977707 - MIR3 SINE MIR -50 158 42 207 283 50 10 chr10 113339402 113339501 -26977264 + L2 LINE L2 1605 1707 -1607 225 360 0 0 chr10 113339707 113339796 -26976969 + L2 LINE L2 1820 1908 -1406 565 346 38 17 chr10 113340010 113340247 -26976518 + MIR SINE MIR 9 250 -12 707 249 7 100 chr10 113340418 113340707 -26976058 + MIR SINE MIR 1 262 0 189 343 152 25 chr10 113340836 113341034 -26975731 + L2 LINE L2 2563 2785 -529 271 279 144 10 chr10 113342040 113342144 -26974621 + MIR SINE MIR 19 136 -126 213 288 189 9 chr10 113342364 113342475 -26974290 + MIR SINE MIR 120 250 -12 211 331 104 19 chr10 113342522 113342676 -26974089 + L2 LINE L2 3128 3294 -19 291 336 57 14 chr10 113343189 113343329 -26973436 - L2 LINE L2 -5 3308 3163 200 339 106 22 chr10 113343365 113343545 -26973220 + L3 LINE CR1 1131 1325 -252 225 94 0 0 chr10 113343563 113343595 -26973170 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 205 315 101 22 chr10 113343595 113343684 -26973081 - L2 LINE L2 -14 3299 3204 541 323 152 8 chr10 113343838 113344101 -26972664 - L2 LINE L2 0 3313 3013 276 319 111 15 chr10 113344267 113344402 -26972363 + LTR16A LTR ERVL 203 350 -100 1805 176 67 103 chr10 113344638 113345133 -26971632 + MER67D LTR ERV1 1 477 -37 28 61 0 0 chr10 113346563 113346612 -26970153 + AT_rich Low_complexity Low_complexity 1 49 0 221 250 15 59 chr10 113346838 113346906 -26969859 + MER5B DNA MER1_type 2 66 -112 536 106 58 0 chr10 113347036 113347140 -26969625 + L1MA9 LINE L1 6203 6312 0 355 312 19 38 chr10 113348072 113348229 -26968536 + MIR SINE MIR 92 245 -17 2197 113 0 0 chr10 113348717 113349017 -26967748 + AluSx SINE Alu 1 300 -12 22 35 0 0 chr10 113349696 113349725 -26967040 + AT_rich Low_complexity Low_complexity 1 29 0 284 390 63 19 chr10 113350093 113350252 -26966513 - MIR3 SINE MIR -18 190 25 3891 127 21 3 chr10 113351150 113351780 -26964985 - L1PA8A LINE L1 -2 6129 5489 4178 156 18 10 chr10 113351782 113352714 -26964051 + L1PA8A LINE L1 4549 5485 -683 1233 199 3 70 chr10 113352737 113353062 -26963703 + AluJo SINE Alu 1 305 0 2186 125 14 8 chr10 113353198 113353551 -26963214 + THE1A LTR MaLR 1 355 0 9677 116 1 2 chr10 113353551 113354905 -26961860 + THE1A-int LTR MaLR 1 1352 -228 243 61 0 0 chr10 113354994 113355027 -26961738 + (TG)n Simple_repeat Simple_repeat 2 34 0 10935 107 11 6 chr10 113355179 113357490 -26959275 - L1PA8A LINE L1 -173 5958 3638 569 103 0 11 chr10 113357465 113357552 -26959213 + L1PA8A LINE L1 3557 3642 -2504 * 200 225 0 0 chr10 113357559 113357599 -26959166 - L2 LINE L2 -248 3024 2985 384 266 45 20 chr10 113357782 113357978 -26958787 + MLT1E LTR MaLR 311 593 0 324 246 99 42 chr10 113358812 113358954 -26957811 - L1MC5 LINE L1 -26 7935 7786 328 324 20 0 chr10 113359131 113359233 -26957532 - MIR SINE MIR -73 189 86 234 344 158 37 chr10 113361001 113361216 -26955549 - MIR SINE MIR -3 259 19 211 37 0 0 chr10 113361834 113361861 -26954904 + (TTTTG)n Simple_repeat Simple_repeat 1 55 0 1541 209 0 7 chr10 113361861 113362143 -26954622 - AluJb SINE Alu -1 307 2 321 282 10 48 chr10 113362934 113363037 -26953728 + MIR SINE MIR 17 115 -147 435 78 0 0 chr10 113363392 113363456 -26953309 + (TC)n Simple_repeat Simple_repeat 1 64 0 387 0 0 0 chr10 113363456 113363499 -26953266 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr10 113365556 113365577 -26951188 + AT_rich Low_complexity Low_complexity 1 21 0 3003 209 23 19 chr10 113365582 113366322 -26950443 - L1 LINE L1 -2144 4002 3260 4655 184 30 24 chr10 113366350 113367456 -26949309 + L1MA9 LINE L1 5184 6306 -6 264 304 13 0 chr10 113367655 113367734 -26949031 + CT-rich Low_complexity Low_complexity 3 82 0 229 272 0 48 chr10 113368150 113368253 -26948512 + (CCTA)n Simple_repeat Simple_repeat 2 99 0 1520 268 128 65 chr10 113368332 113369415 -26947350 - L1MC4a LINE L1 -12 7773 6759 201 39 0 0 chr10 113369415 113369441 -26947324 + (CA)n Simple_repeat Simple_repeat 1 26 0 1520 268 128 65 chr10 113369441 113370303 -26946462 - L1MC4a LINE L1 -1026 6759 5689 236 229 99 106 chr10 113370039 113370308 -26946457 - L1MB5 LINE L1 -234 5940 5672 * 342 0 0 0 chr10 113370308 113370346 -26946419 + (TG)n Simple_repeat Simple_repeat 2 39 0 236 229 99 106 chr10 113370346 113370378 -26946387 - L1MB5 LINE L1 -502 5672 5641 524 110 49 0 chr10 113370379 113370461 -26946304 + MER4A LTR ERV1 1 86 -578 1675 154 11 25 chr10 113370482 113370832 -26945933 + MER4A LTR ERV1 261 664 0 1409 210 29 46 chr10 113370835 113371271 -26945494 - L1MB5 LINE L1 -520 5646 5222 603 300 62 15 chr10 113371270 113371724 -26945041 - L1MCc LINE L1 -4029 3093 2619 * 616 274 59 11 chr10 113371767 113372034 -26944731 - L1MCc LINE L1 -4245 2754 2378 1891 126 110 16 chr10 113372044 113372362 -26944403 + LTR9 LTR ERV1 1 348 -264 1153 301 66 20 chr10 113372378 113373157 -26943608 - L1MCc LINE L1 -4903 1520 826 613 275 153 74 chr10 113373300 113373733 -26943032 - MLT1D LTR MaLR 0 467 1 227 321 0 19 chr10 113374038 113374144 -26942621 - L1MCc LINE L1 -6210 213 110 245 395 99 12 chr10 113375110 113375272 -26941493 + MIR3 SINE MIR 21 196 -12 443 349 54 12 chr10 113375548 113375789 -26940976 + MIR SINE MIR 12 262 0 214 322 0 0 chr10 113376155 113376214 -26940551 - L2 LINE L2 -5 3308 3250 255 182 182 0 chr10 113376642 113376719 -26940046 - L1MA9 LINE L1 -25 6287 6197 795 149 62 6 chr10 113376736 113376897 -26939868 - L1MA9 LINE L1 -232 6080 5911 226 257 27 40 chr10 113377381 113377455 -26939310 + MER5B DNA MER1_type 21 93 -85 343 318 42 42 chr10 113378425 113378617 -26938148 - MIR SINE MIR -64 198 7 464 229 29 58 chr10 113379387 113379589 -26937176 + MER106B DNA MER1_type 32 236 0 424 297 21 36 chr10 113379631 113379823 -26936942 + Charlie8 DNA MER1_type 72 260 -2157 606 306 60 31 chr10 113380114 113381048 -26935717 + L1ME2 LINE L1 4981 5948 -214 5500 181 25 15 chr10 113381685 113381942 -26934823 - L1MC1 LINE L1 0 6333 6080 1779 160 38 27 chr10 113381942 113382311 -26934454 - THE1C LTR MaLR -2 373 1 5500 181 25 15 chr10 113382311 113382348 -26934417 - L1MC1 LINE L1 -253 6080 6045 4401 121 44 44 chr10 113382348 113383127 -26933638 + MER4E LTR ERV1 1 779 0 5500 181 25 15 chr10 113383127 113383407 -26933358 - L1MC1 LINE L1 -288 6045 5769 2601 168 103 33 chr10 113383407 113383978 -26932787 - LTR36 LTR ERV1 0 611 1 5500 181 25 15 chr10 113383978 113384633 -26932132 - L1MC1 LINE L1 -564 5769 5088 358 311 153 24 chr10 113384743 113384997 -26931768 - L2 LINE L2 -58 3255 2969 180 319 167 36 chr10 113385006 113385144 -26931621 + L2 LINE L2 2924 3079 -193 249 326 31 39 chr10 113385465 113385594 -26931171 - MIR SINE MIR -2 260 133 285 175 18 18 chr10 113386497 113386554 -26930211 - MIR SINE MIR -113 149 93 1332 194 63 73 chr10 113386601 113386983 -26929782 - MLT1B LTR MaLR 0 390 13 21 36 0 0 chr10 113387176 113387204 -26929561 + AT_rich Low_complexity Low_complexity 1 28 0 288 264 23 92 chr10 113387323 113387497 -26929268 - L2 LINE L2 -2 3311 3150 329 257 29 9 chr10 113387625 113387730 -26929035 - L1MC4 LINE L1 -5 8037 7931 216 0 0 0 chr10 113387750 113387774 -26928991 + (TC)n Simple_repeat Simple_repeat 1 24 0 233 218 0 18 chr10 113387994 113388049 -26928716 + GA-rich Low_complexity Low_complexity 3 56 0 297 289 116 0 chr10 113388066 113388187 -26928578 - MIR SINE MIR -125 137 3 211 316 154 0 chr10 113388498 113388615 -26928150 + L2 LINE L2 3137 3271 -1 967 88 0 0 chr10 113388840 113389017 -26927748 - AluY SINE Alu 0 333 157 283 301 0 27 chr10 113389486 113389559 -26927206 + MIR SINE MIR 3 73 -189 380 277 77 0 chr10 113389577 113389707 -26927058 - MIR SINE MIR -76 186 47 281 175 35 0 chr10 113390851 113390908 -26925857 - MIR SINE MIR -113 149 91 304 317 172 20 chr10 113391107 113391514 -26925251 - L2 LINE L2 -597 2717 2249 230 200 0 0 chr10 113391620 113391660 -26925105 - MER5A DNA MER1_type 0 189 150 468 269 48 122 chr10 113391661 113391932 -26924833 + MIR SINE MIR 5 255 -7 248 265 34 94 chr10 113392107 113392224 -26924541 + MER5A DNA MER1_type 73 182 -7 306 0 0 0 chr10 113393600 113393634 -26923131 + (CA)n Simple_repeat Simple_repeat 2 35 0 438 345 45 11 chr10 113394531 113394708 -26922057 + MER5A DNA MER1_type 7 189 0 223 307 27 0 chr10 113396013 113396088 -26920677 - MIR SINE MIR -125 137 61 323 299 213 34 chr10 113396107 113396226 -26920539 - L2 LINE L2 0 3313 3217 240 100 0 0 chr10 113396226 113396266 -26920499 + (CA)n Simple_repeat Simple_repeat 2 41 0 323 299 213 34 chr10 113396266 113396437 -26920328 - L2 LINE L2 -96 3217 2971 380 262 0 134 chr10 113396738 113396771 -26919994 + L2 LINE L2 3143 3179 -93 2380 189 37 2 chr10 113396771 113397290 -26919475 + L1MB4 LINE L1 5639 6175 -5 380 262 0 134 chr10 113397290 113397405 -26919360 + L2 LINE L2 3179 3271 -1 297 0 0 0 chr10 113397577 113397610 -26919155 + (CA)n Simple_repeat Simple_repeat 1 33 0 1635 154 77 0 chr10 113397758 113398030 -26918735 - AluSx SINE Alu -18 294 2 228 245 139 40 chr10 113398169 113398320 -26918445 - MER113 DNA MER1_type? -339 182 17 198 191 0 0 chr10 113398809 113398851 -26917914 + (CA)n Simple_repeat Simple_repeat 1 42 0 270 0 0 0 chr10 113399329 113399359 -26917406 + (CA)n Simple_repeat Simple_repeat 1 30 0 211 330 37 28 chr10 113400091 113400200 -26916565 + MIR SINE MIR 37 146 -62 229 136 30 30 chr10 113400253 113400319 -26916446 + (TTATA)n Simple_repeat Simple_repeat 2 67 0 430 86 0 29 chr10 113400319 113400389 -26916376 + MADE1 DNA Mariner 13 80 0 25 31 0 0 chr10 113401559 113401591 -26915174 + AT_rich Low_complexity Low_complexity 1 32 0 302 315 77 0 chr10 113402381 113402511 -26914254 + MIR SINE MIR 46 185 -77 231 371 0 21 chr10 113402586 113402726 -26914039 + MLT1K LTR MaLR 142 278 -310 364 314 90 34 chr10 113403357 113403739 -26913026 + MLT1H LTR MaLR 1 404 -191 417 129 0 0 chr10 113403855 113403925 -26912840 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 250 69 123 chr10 113404586 113404790 -26911975 + MLT1K LTR MaLR 351 543 -45 267 280 60 10 chr10 113405168 113405268 -26911497 - L1ME LINE L1 -434 5728 5624 24 0 0 0 chr10 113405959 113405983 -26910782 + AT_rich Low_complexity Low_complexity 1 24 0 230 143 0 0 chr10 113405983 113406025 -26910740 - LTR5 LTR ERVK -170 799 758 412 245 20 89 chr10 113457060 113457362 -26859403 - L1ME2 LINE L1 -94 6070 5790 28 0 0 0 chr10 113458321 113458349 -26858416 + AT_rich Low_complexity Low_complexity 1 28 0 5974 104 28 1 chr10 113458616 113458870 -26857895 + L1PA10 LINE L1 4397 4643 -1525 1540 167 83 17 chr10 113458870 113459158 -26857607 + AluSx SINE Alu 1 307 -5 5974 104 28 1 chr10 113459158 113460654 -26856111 + L1PA10 LINE L1 4643 6168 0 198 338 45 30 chr10 113460715 113460848 -26855917 - MIR SINE MIR -70 192 58 677 273 38 39 chr10 113461042 113461283 -26855482 - MIR SINE MIR -18 244 3 216 163 0 0 chr10 113461684 113461727 -26855038 + (CA)n Simple_repeat Simple_repeat 2 44 0 381 289 98 23 chr10 113461800 113461973 -26854792 + L2 LINE L2 1787 1972 -1342 361 277 9 0 chr10 113461988 113462100 -26854665 - MER94 DNA DNA -21 113 1 416 309 96 70 chr10 113462101 113462376 -26854389 + L2 LINE L2 1956 2249 -1065 1519 104 0 0 chr10 113462376 113462569 -26854196 - AluSg/x SINE Alu -8 302 110 416 309 96 70 chr10 113462569 113462750 -26854015 + L2 LINE L2 2249 2424 -890 2110 189 48 76 chr10 113462751 113463316 -26853449 - MLT2B3 LTR ERVL -5 549 1 22 35 0 0 chr10 113463524 113463553 -26853212 + AT_rich Low_complexity Low_complexity 1 29 0 2826 149 23 92 chr10 113463553 113464197 -26852568 + MER7C DNA MER2_type 2 601 -1 203 170 21 0 chr10 113464702 113464749 -26852016 + T-rich Low_complexity Low_complexity 2 49 0 2384 210 92 28 chr10 113465349 113466030 -26850735 - MER50 LTR ERV1 0 734 10 462 79 0 0 chr10 113467927 113467990 -26848775 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 3310 124 14 0 chr10 113468073 113468595 -26848170 + MER51C LTR ERV1 1 640 0 318 26 0 0 chr10 113470342 113470381 -26846384 + (CA)n Simple_repeat Simple_repeat 2 40 0 923 256 52 46 chr10 113471173 113471633 -26845132 - L1MDa LINE L1 -1418 5122 4660 3251 184 43 0 chr10 113471650 113472206 -26844559 - LTR69 LTR ERVL -8 580 1 231 185 123 25 chr10 113472209 113472290 -26844475 - L1MDa LINE L1 -1888 4652 4564 1438 233 98 8 chr10 113472492 113473015 -26843750 - L1MDa LINE L1 -2105 4435 3866 710 281 97 41 chr10 113473685 113474356 -26842409 - L1MDa LINE L1 -4332 2389 1640 294 303 128 41 chr10 113474399 113474594 -26842171 - MER58C DNA MER1_type 0 215 4 195 111 79 0 chr10 113474904 113474967 -26841798 + (TA)n Simple_repeat Simple_repeat 2 69 0 21 57 0 0 chr10 113474995 113475030 -26841735 + AT_rich Low_complexity Low_complexity 1 35 0 469 176 0 20 chr10 113475204 113475306 -26841459 + L1MA8 LINE L1 6188 6287 -4 367 241 67 22 chr10 113475316 113475540 -26841225 + L1ME2 LINE L1 5125 5358 -788 2272 105 0 10 chr10 113475547 113475860 -26840905 + AluSx SINE Alu 1 310 -2 1329 271 96 26 chr10 113475870 113476486 -26840279 + L1ME2 LINE L1 5488 6146 -18 245 390 47 6 chr10 113477838 113478010 -26838755 - L3 LINE CR1 -203 1374 1196 275 281 95 112 chr10 113479091 113479376 -26837389 + L2 LINE L2 3026 3305 -8 355 323 153 0 chr10 113480419 113480608 -26836157 - MIR SINE MIR -1 261 44 2467 254 88 46 chr10 113482699 113483776 -26832989 - L1MC4a LINE L1 -1194 6614 5493 1999 277 27 12 chr10 113484088 113484746 -26832019 - L1ME1 LINE L1 -16 6150 5483 1004 102 0 0 chr10 113484755 113484882 -26831883 - AluY SINE Alu -22 289 163 447 210 123 31 chr10 113484882 113485044 -26831721 - L1MC4a LINE L1 -1839 5969 5793 1375 65 0 0 chr10 113485044 113485212 -26831553 - AluY SINE Alu -143 168 1 1279 208 121 87 chr10 113485216 113485907 -26830858 - L1ME1 LINE L1 -684 5490 4773 1878 178 62 19 chr10 113485907 113486323 -26830442 + Tigger2a DNA MER2_type 1 434 0 1279 208 121 87 chr10 113486323 113486602 -26830163 - L1ME1 LINE L1 -1401 4773 4505 1250 274 33 57 chr10 113486603 113487056 -26829709 + MLT2B1 LTR ERVL 1 442 -78 267 31 0 0 chr10 113487100 113487132 -26829633 + (CA)n Simple_repeat Simple_repeat 1 32 0 1882 286 33 20 chr10 113487183 113488030 -26828735 - L1ME1 LINE L1 -1639 4507 3650 442 339 45 64 chr10 113489072 113489476 -26827289 + L2 LINE L2 2918 3313 0 267 320 10 20 chr10 113489870 113489970 -26826795 - MIR SINE MIR -159 103 5 2543 249 49 46 chr10 113490225 113491163 -26825602 - L1MC4a LINE L1 0 7808 6868 340 336 35 21 chr10 113491225 113491368 -26825397 + MIR3 SINE MIR 19 163 -45 317 309 44 25 chr10 113491775 113491979 -26824786 + L2 LINE L2 2972 3179 -134 1415 124 22 0 chr10 113493101 113493326 -26823439 - L1MA2 LINE L1 0 6304 6075 1043 283 24 6 chr10 113493525 113493854 -26822911 - LTR43 LTR ERV1 -137 465 131 4752 161 26 13 chr10 113494035 113495349 -26821416 - L1MA2 LINE L1 -194 6110 4775 1274 188 110 23 chr10 113495848 113496193 -26820572 + THE1C LTR MaLR 1 375 0 9533 136 56 4 chr10 113496193 113497695 -26819070 + THE1C-int LTR MaLR 1 1580 0 1590 150 126 26 chr10 113497695 113498036 -26818729 + THE1C LTR MaLR 1 375 0 503 411 14 11 chr10 113498135 113498422 -26818343 - L2 LINE L2 -428 2886 2599 2259 127 117 5 chr10 113499288 113499673 -26817092 + MSTA LTR MaLR 1 428 0 1082 261 4 0 chr10 113500814 113501094 -26815671 - L1ME1 LINE L1 -3305 2841 2561 5244 198 26 43 chr10 113501097 113502463 -26814302 + L1MA4 LINE L1 3337 4725 -1575 2081 116 3 3 chr10 113502463 113502755 -26814010 + AluSc SINE Alu 1 292 -17 5244 198 26 43 chr10 113502755 113502837 -26813928 + L1MA4 LINE L1 4725 4807 -1493 1436 240 3 19 chr10 113502837 113503145 -26813620 + AluJo SINE Alu 2 304 -8 5244 198 26 43 chr10 113503145 113503982 -26812783 + L1MA4 LINE L1 4807 5467 -833 2184 112 38 41 chr10 113503982 113504347 -26812418 + THE1B LTR MaLR 1 364 0 5244 198 26 43 chr10 113504347 113505159 -26811606 + L1MA4 LINE L1 5467 6291 -9 271 282 245 12 chr10 113507302 113507465 -26809300 - MIR SINE MIR -14 248 48 258 291 51 0 chr10 113508594 113508673 -26808092 + LTR16C LTR ERVL 374 456 -35 1611 194 39 89 chr10 113509594 113510031 -26806734 + MER67D LTR ERV1 21 435 -79 311 137 0 147 chr10 113510032 113510134 -26806631 + L1MA7 LINE L1 6204 6290 -1 342 344 67 17 chr10 113510568 113510748 -26806017 + MIR SINE MIR 20 208 -54 529 266 70 6 chr10 113513337 113513495 -26803270 + MLT1J1 LTR MaLR 47 214 -232 1241 223 101 21 chr10 113513853 113514181 -26802584 - MLT1C LTR MaLR -76 391 38 300 70 0 0 chr10 113514189 113514232 -26802533 + (TG)n Simple_repeat Simple_repeat 2 44 0 246 105 0 0 chr10 113514535 113514573 -26802192 + (CA)n Simple_repeat Simple_repeat 1 38 0 1257 322 63 33 chr10 113514592 113515163 -26801602 - MLT2F LTR ERVL -74 589 2 2471 268 38 10 chr10 113515491 113516223 -26800542 - L1PA13 LINE L1 -4715 2072 1320 920 349 35 5 chr10 113516330 113516734 -26800031 - L1PA13 LINE L1 -6176 611 196 384 175 0 0 chr10 113516751 113516814 -26799951 - MER81 DNA DNA -41 73 11 186 43 0 0 chr10 113517129 113517152 -26799613 + (T)n Simple_repeat Simple_repeat 1 23 0 308 325 103 24 chr10 113517539 113517665 -26799100 + MER91A DNA MER1_type 45 180 -16 2557 186 62 24 chr10 113518733 113518773 -26797992 - MLT2B2 LTR ERVL 0 515 478 183 80 0 0 chr10 113518773 113518798 -26797967 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 2557 186 62 24 chr10 113518798 113519253 -26797512 - MLT2B2 LTR ERVL -37 478 1 2204 112 0 0 chr10 113520193 113520479 -26796286 + AluSg SINE Alu 1 286 -24 1713 170 61 15 chr10 113520674 113521016 -26795749 + THE1C LTR MaLR 18 375 0 242 279 25 25 chr10 113521060 113521221 -26795544 + (TA)n Simple_repeat Simple_repeat 2 162 0 552 148 62 23 chr10 113521634 113521762 -26795003 - L1MA9 LINE L1 0 6312 6180 1557 190 9 34 chr10 113521776 113522103 -26794662 - L1MA9 LINE L1 -243 6069 5751 237 77 0 0 chr10 113522151 113522190 -26794575 - L1M2 LINE L1 -498 5793 5755 12514 196 79 20 chr10 113522193 113522212 -26794553 - L1M2 LINE L1 -497 6531 6515 198 0 0 0 chr10 113522212 113522234 -26794531 + (TG)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 113522233 113522253 -26794512 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 12514 196 79 20 chr10 113522234 113528384 -26788381 - L1M2 LINE L1 -513 6515 6 386 293 9 9 chr10 113528695 113528801 -26787964 - MIR SINE MIR -106 156 51 351 282 177 14 chr10 113530179 113530388 -26786377 + MIR SINE MIR 20 262 0 263 338 77 24 chr10 113530963 113531170 -26785595 - L1MC/D LINE L1 -2084 5724 5507 29 28 0 0 chr10 113531665 113531701 -26785064 + AT_rich Low_complexity Low_complexity 1 36 0 6760 68 2 3 chr10 113532235 113533196 -26783569 + L1PA7 LINE L1 5183 6142 -12 22 80 0 0 chr10 113533197 113533247 -26783518 + AT_rich Low_complexity Low_complexity 1 50 0 1825 221 29 41 chr10 113533488 113533980 -26782785 - MER67D LTR ERV1 -28 486 1 274 327 97 0 chr10 113534970 113535083 -26781682 - MIR3 SINE MIR 0 208 85 184 317 87 48 chr10 113535461 113535565 -26781200 - MIR SINE MIR -135 127 20 24 53 0 0 chr10 113539277 113539315 -26777450 + AT_rich Low_complexity Low_complexity 1 38 0 376 339 39 35 chr10 113539539 113539799 -26776966 + MIR SINE MIR 2 262 0 315 0 0 0 chr10 113540891 113540926 -26775839 + (TC)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr10 113540925 113540946 -26775819 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 370 391 129 9 chr10 113541889 113542308 -26774457 + L2 LINE L2 2804 3272 0 215 275 12 12 chr10 113543603 113543683 -26773082 - MIR SINE MIR -3 259 180 1767 322 45 44 chr10 113543895 113545076 -26771689 - HERV16 LTR ERVL -1911 3085 2150 1845 312 32 57 chr10 113545592 113546622 -26770143 - HERV16 LTR ERVL -3687 1309 306 21 36 0 0 chr10 113547418 113547446 -26769319 + AT_rich Low_complexity Low_complexity 1 28 0 238 354 49 15 chr10 113548014 113548143 -26768622 + MIR SINE MIR 24 154 -67 380 313 52 64 chr10 113548778 113549011 -26767754 + MIR SINE MIR 21 250 -12 805 250 78 17 chr10 113549220 113549452 -26767313 - MIR SINE MIR -2 260 15 498 96 0 0 chr10 113549667 113549740 -26767025 + (TG)n Simple_repeat Simple_repeat 1 73 0 264 312 48 56 chr10 113550033 113550158 -26766607 - L2 LINE L2 -32 3240 3117 396 97 0 0 chr10 113551040 113551102 -26765663 + (CA)n Simple_repeat Simple_repeat 2 63 0 315 322 103 14 chr10 113553101 113553315 -26763450 - MIR SINE MIR -5 257 25 266 356 29 19 chr10 113553936 113554040 -26762725 - MER91A DNA MER1_type -91 105 1 2079 135 0 0 chr10 113554241 113554537 -26762228 - AluSq SINE Alu -17 296 1 1610 219 37 50 chr10 113555637 113556097 -26760668 + MLT1C LTR MaLR 1 454 -13 1846 195 48 20 chr10 113556097 113556605 -26760160 + LTR27 LTR ERV1 2 501 0 295 238 305 0 chr10 113556726 113556831 -26759934 + LTR27-int LTR ERV1 113 249 -6842 459 0 0 0 chr10 113556831 113556882 -26759883 + (TG)n Simple_repeat Simple_repeat 2 52 0 1772 142 11 0 chr10 113556888 113557149 -26759616 - AluSq SINE Alu -49 264 1 692 257 77 6 chr10 113557153 113557336 -26759429 + LTR27-int LTR ERV1 406 601 -6490 14396 168 33 22 chr10 113557624 113562472 -26754293 + LTR27-int LTR ERV1 602 5484 -393 1130 127 48 11 chr10 113562470 113562659 -26754106 + LTR27-int LTR ERV1 6892 7087 -4 * 2032 173 55 14 chr10 113562663 113563168 -26753597 + LTR27 LTR ERV1 3 501 0 21 0 0 0 chr10 113563199 113563220 -26753545 + AT_rich Low_complexity Low_complexity 1 21 0 366 347 57 44 chr10 113564236 113564484 -26752281 - MIR SINE MIR -2 260 10 186 43 0 0 chr10 113564849 113564872 -26751893 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 253 246 85 92 chr10 113564983 113565113 -26751652 - MIR3 SINE MIR -68 140 12 386 378 41 5 chr10 113565918 113566114 -26750651 + MIR SINE MIR 3 205 -57 206 279 0 0 chr10 113567397 113567440 -26749325 + L2 LINE L2 3210 3252 -20 25 0 0 0 chr10 113567817 113567842 -26748923 + AT_rich Low_complexity Low_complexity 1 25 0 649 189 0 16 chr10 113567843 113567970 -26748795 - FLAM_C SINE Alu -18 125 1 1571 204 139 99 chr10 113568096 113568542 -26748223 + MLT2B1 LTR ERVL 1 464 0 481 335 40 28 chr10 113569190 113569441 -26747324 + MIR SINE MIR 9 262 0 579 276 32 138 chr10 113570223 113570657 -26746108 + MLT1G LTR MaLR 5 392 -150 324 246 0 0 chr10 113570693 113570762 -26746003 + MIR SINE MIR 94 162 -100 210 260 0 14 chr10 113570790 113570863 -26745902 + A-rich Low_complexity Low_complexity 1 72 0 230 293 0 0 chr10 113571085 113571143 -26745622 + (TG)n Simple_repeat Simple_repeat 2 59 0 184 319 149 21 chr10 113572318 113572412 -26744353 + MIR SINE MIR 36 141 -67 244 169 0 14 chr10 113572482 113572553 -26744212 - L1MC4 LINE L1 -1333 6709 6640 318 321 61 24 chr10 113572657 113572822 -26743943 + MIR SINE MIR 84 254 -8 180 125 0 0 chr10 113572832 113572864 -26743901 + (T)n Simple_repeat Simple_repeat 1 32 0 192 294 35 35 chr10 113573156 113573241 -26743524 + MIR SINE MIR 65 149 -59 187 347 0 27 chr10 113573330 113573405 -26743360 - L2 LINE L2 -94 3178 3106 252 313 0 0 chr10 113573446 113573513 -26743252 - L2 LINE L2 -13 3259 3193 263 82 49 16 chr10 113573638 113573699 -26743066 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 2056 94 0 10 chr10 113574402 113574701 -26742064 - L1PA13 LINE L1 -2 6161 5866 388 80 0 0 chr10 113574701 113574751 -26742014 + L1P4 LINE L1 5714 5763 -402 195 170 0 0 chr10 113574933 113574980 -26741785 + (CAT)n Simple_repeat Simple_repeat 3 49 0 378 273 65 14 chr10 113575482 113575621 -26741144 - MIR SINE MIR -111 151 6 227 295 0 16 chr10 113576191 113576252 -26740513 + MIR SINE MIR 77 136 -72 185 333 126 0 chr10 113576580 113576691 -26740074 - MER5A DNA MER1_type -25 164 40 401 307 142 13 chr10 113576934 113577159 -26739606 + MIR SINE MIR 1 254 -8 2138 117 7 0 chr10 113577345 113577643 -26739122 - AluSq SINE Alu -11 302 3 180 0 0 0 chr10 113577653 113577673 -26739092 + (T)n Simple_repeat Simple_repeat 1 20 0 663 242 75 61 chr10 113577688 113578047 -26738718 - MLT1H LTR MaLR -168 374 44 35 0 0 0 chr10 113578404 113578439 -26738326 + AT_rich Low_complexity Low_complexity 1 35 0 401 262 24 49 chr10 113579309 113579473 -26737292 - L1MC4a LINE L1 -1968 5840 5681 27 29 0 0 chr10 113579502 113579536 -26737229 + AT_rich Low_complexity Low_complexity 1 34 0 14103 156 25 19 chr10 113579536 113584952 -26731813 - L1MA1 LINE L1 0 7721 2271 9607 176 28 10 chr10 113584929 113587650 -26729115 - L1M1 LINE L1 -3715 3850 652 * 5544 63 3 1 chr10 113587648 113588379 -26728386 + L1P LINE L1 1216 1947 -4199 * 425 273 155 44 chr10 113588759 113589126 -26727639 - MLT1K LTR MaLR -10 578 171 2667 129 24 40 chr10 113589318 113589936 -26726829 - MER4E LTR ERV1 0 779 1 24 32 0 0 chr10 113590240 113590271 -26726494 + AT_rich Low_complexity Low_complexity 1 31 0 223 395 82 0 chr10 113590343 113590477 -26726288 + MIR3 SINE MIR 16 160 -48 2033 117 3 0 chr10 113591041 113591341 -26725424 + L1PA11 LINE L1 5868 6168 -6 969 96 85 45 chr10 113591353 113591434 -26725331 - L1P4 LINE L1 -698 5476 5400 1869 131 10 27 chr10 113591434 113591731 -26725034 - AluSx SINE Alu -20 292 1 969 96 85 45 chr10 113591731 113591848 -26724917 - L1P4 LINE L1 -774 5400 5270 1243 242 51 47 chr10 113591859 113592388 -26724377 + L1ME1 LINE L1 5629 6159 -7 1304 204 84 0 chr10 113593250 113593525 -26723240 + AluJo SINE Alu 1 298 -14 356 379 39 7 chr10 113593810 113593963 -26722802 - MIR SINE MIR -103 159 2 523 356 54 66 chr10 113595128 113595720 -26721045 - L2 LINE L2 -790 2524 1940 318 237 0 52 chr10 113595799 113595896 -26720869 + L1MC4 LINE L1 6612 6703 -1339 4263 185 28 39 chr10 113595918 113597348 -26719417 - L1MB1 LINE L1 -1 6167 4738 822 94 0 247 chr10 113597348 113597445 -26719320 - Tigger5 DNA MER2_type -1 2322 2315 1660 168 66 36 chr10 113597445 113597809 -26718956 + THE1C LTR MaLR 1 375 0 822 94 0 247 chr10 113597809 113597946 -26718819 - Tigger5 DNA MER2_type -8 2315 2146 2174 108 0 10 chr10 113597970 113598267 -26718498 + AluSg SINE Alu 3 296 -14 825 251 107 37 chr10 113598307 113598522 -26718243 + MER8 DNA MER2_type 9 238 -1 1548 254 41 60 chr10 113598525 113599187 -26717578 - L1M4c LINE L1 -4552 1832 1184 1960 281 43 28 chr10 113599207 113600445 -26716320 - L1M3de LINE L1 -4835 1056 6 219 333 76 15 chr10 113600464 113600596 -26716169 - L2 LINE L2 -1634 1680 1541 2278 238 82 19 chr10 113600695 113601463 -26715302 - L1MB7 LINE L1 -103 6081 5266 6027 156 51 22 chr10 113601465 113602657 -26714108 - Tigger3b DNA MER2_type -3 1228 2 462 186 25 17 chr10 113602681 113602799 -26713966 - L1MB7 LINE L1 -901 5245 5127 1661 214 72 33 chr10 113602804 113603343 -26713422 - L1MB7 LINE L1 -2910 3236 2667 243 0 0 0 chr10 113603343 113603370 -26713395 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1661 214 72 33 chr10 113603370 113603470 -26713295 - L1MB7 LINE L1 -3479 2667 2572 2103 125 0 0 chr10 113603780 113604075 -26712690 - AluY SINE Alu -16 295 1 468 255 96 70 chr10 113605474 113605745 -26711020 - L2 LINE L2 -1 3312 3035 889 307 122 21 chr10 113605975 113606630 -26710135 - L1ME3A LINE L1 -6 6164 5437 1029 128 50 173 chr10 113610851 113610917 -26705848 - Tigger3(Golem) DNA MER2_type -44 2984 2912 1840 152 0 0 chr10 113610917 113611194 -26705571 + AluSx SINE Alu 1 277 -35 1029 128 50 173 chr10 113611194 113611483 -26705282 - Tigger3(Golem) DNA MER2_type -116 2912 18 3197 93 19 7 chr10 113611495 113611927 -26704838 - LTR3b LTR ERVK 0 437 1 439 224 20 34 chr10 113611958 113612105 -26704660 + Charlie1 DNA MER1_type 2611 2755 -6 313 261 200 30 chr10 113612159 113612324 -26704441 + MIR SINE MIR 67 259 -3 322 307 0 10 chr10 113613417 113613518 -26703247 - MIR SINE MIR -111 151 52 292 296 40 16 chr10 113614294 113614419 -26702346 - L1ME LINE L1 -512 5678 5551 193 318 107 62 chr10 113615866 113616155 -26700610 - L2 LINE L2 -1024 2290 1989 2201 115 10 0 chr10 113616208 113616512 -26700253 + AluSx SINE Alu 1 307 -5 483 63 0 0 chr10 113617168 113617231 -26699534 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 233 305 53 80 chr10 113617489 113617640 -26699125 - L2 LINE L2 -211 3061 2915 361 360 30 50 chr10 113617791 113618088 -26698677 - L2 LINE L2 -559 2755 2465 1769 91 12 4 chr10 113618289 113618530 -26698235 + AluY SINE Alu 41 283 -28 283 374 19 24 chr10 113618634 113618845 -26697920 + L2 LINE L2 2162 2371 -943 2276 91 0 10 chr10 113619184 113619482 -26697283 - AluSx SINE Alu -17 295 1 372 241 67 22 chr10 113619489 113619713 -26697052 - L1ME LINE L1 -788 5427 5194 1696 160 118 8 chr10 113619723 113620105 -26696660 - L1MA8 LINE L1 -4 6287 5864 315 318 71 0 chr10 113620141 113620267 -26696498 - L1ME LINE L1 -1028 5187 5053 266 288 121 15 chr10 113620514 113620712 -26696053 - L1ME LINE L1 -2965 3250 3032 1060 253 136 27 chr10 113620732 113621580 -26695185 - L1MEc LINE L1 -3302 2913 2014 365 256 116 8 chr10 113622095 113622224 -26694541 - L1MEc LINE L1 -4874 1343 1201 372 300 25 8 chr10 113622228 113622348 -26694417 - MER58A DNA MER1_type 0 127 6 21 0 0 0 chr10 113622375 113622396 -26694369 + AT_rich Low_complexity Low_complexity 1 21 0 412 311 76 66 chr10 113622397 113622792 -26693973 - L1MEc LINE L1 -5326 1070 672 1081 64 0 0 chr10 113623945 113624086 -26692679 + L1PA7 LINE L1 6013 6153 -1 2046 139 0 0 chr10 113625018 113625329 -26691436 + AluSx SINE Alu 1 311 0 50 42 0 0 chr10 113625853 113625924 -26690841 + AT_rich Low_complexity Low_complexity 1 71 0 1789 172 57 28 chr10 113625935 113626289 -26690476 + THE1B LTR MaLR 1 364 0 198 103 0 0 chr10 113626874 113626903 -26689862 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 548 278 62 11 chr10 113627196 113627372 -26689393 + MIR SINE MIR 69 253 -9 457 311 84 24 chr10 113627360 113627527 -26689238 - MIR SINE MIR -3 205 27 * 31 68 0 0 chr10 113629106 113629165 -26687600 + AT_rich Low_complexity Low_complexity 1 59 0 2109 207 167 26 chr10 113629177 113629867 -26686898 + LTR48 LTR ERV1 1 787 0 1913 129 3 24 chr10 113630160 113630447 -26686318 - AluSg SINE Alu -24 286 6 294 73 0 0 chr10 113630821 113630862 -26685903 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2229 131 48 55 chr10 113631119 113631697 -26685068 + MER4A LTR ERV1 1 465 0 336 119 0 0 chr10 113632607 113632666 -26684099 + (CATAA)n Simple_repeat Simple_repeat 1 59 0 477 268 0 58 chr10 113633315 113633453 -26683312 + MER96 DNA MER1_type? 8 137 -38 286 380 48 24 chr10 113633590 113633989 -26682776 + L2 LINE L2 2641 3048 -265 2013 229 47 11 chr10 113634006 113634544 -26682221 - L1MB8 LINE L1 -7 6171 5615 1020 198 52 21 chr10 113634532 113634820 -26681945 - L1MB8 LINE L1 -770 5376 5080 * 23 0 0 0 chr10 113634844 113634867 -26681898 + AT_rich Low_complexity Low_complexity 1 23 0 531 281 22 0 chr10 113634882 113635017 -26681748 - MER82 DNA MER2_type -515 138 1 3651 288 70 38 chr10 113635028 113637108 -26679657 - L1M4c LINE L1 -4816 2143 8 2649 119 31 5 chr10 113637975 113638394 -26678371 + L1PA16 LINE L1 5728 6157 -9 1645 256 131 31 chr10 113638825 113639375 -26677390 - MER77 LTR ERV1 0 605 1 2347 80 0 20 chr10 113639591 113639893 -26676872 - AluY SINE Alu -15 296 1 450 371 44 0 chr10 113639899 113640128 -26676637 - MIR SINE MIR -14 248 10 350 320 109 0 chr10 113640455 113640583 -26676182 + L3 LINE CR1 1348 1489 -88 220 189 0 0 chr10 113641670 113641707 -26675058 + GA-rich Low_complexity Low_complexity 1 37 0 366 351 74 10 chr10 113643129 113643244 -26673521 - MIR SINE MIR 0 262 156 297 0 0 0 chr10 113643244 113643277 -26673488 + (TA)n Simple_repeat Simple_repeat 2 34 0 366 351 74 10 chr10 113643277 113643363 -26673402 - MIR SINE MIR -106 156 48 313 358 74 0 chr10 113644011 113644159 -26672606 + MIR SINE MIR 56 214 -48 1740 83 38 8 chr10 113644160 113644424 -26672341 - L1MA1 LINE L1 -337 5965 5694 615 72 0 0 chr10 113644424 113644502 -26672263 + L1MA1 LINE L1 6219 6301 -1 594 356 59 16 chr10 113645072 113645375 -26671390 + LTR16A LTR ERVL 60 375 -75 192 152 0 0 chr10 113645407 113645440 -26671325 + T-rich Low_complexity Low_complexity 1 33 0 1320 323 50 22 chr10 113645485 113646119 -26670646 + HERV16 LTR ERVL 13 664 -4332 3872 195 43 7 chr10 113646237 113647073 -26669692 - L1MC3 LINE L1 -6 7779 6914 312 117 70 23 chr10 113647532 113647703 -26669062 + (TA)n Simple_repeat Simple_repeat 2 180 0 404 172 65 12 chr10 113647715 113647884 -26668881 + (TA)n Simple_repeat Simple_repeat 2 179 0 185 61 61 20 chr10 113647911 113647960 -26668805 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 588 151 0 0 chr10 113647970 113648056 -26668709 + AluY SINE Alu 202 287 -24 507 110 24 65 chr10 113648077 113648372 -26668393 + (TATAA)n Simple_repeat Simple_repeat 1 283 0 40 0 0 0 chr10 113648384 113648424 -26668341 + AT_rich Low_complexity Low_complexity 1 40 0 42392 34 23 1 chr10 113648425 113654429 -26662336 + L1HS LINE L1 22 6155 0 277 114 84 18 chr10 113654438 113654605 -26662160 + (TA)n Simple_repeat Simple_repeat 2 179 0 298 229 0 21 chr10 113654605 113654732 -26662033 + (TATAA)n Simple_repeat Simple_repeat 1 124 0 1276 155 0 10 chr10 113654732 113654926 -26661839 - AluSg/x SINE Alu -24 288 97 1448 327 54 21 chr10 113654971 113655860 -26660905 - L1MEc LINE L1 -5366 1030 113 1781 134 34 7 chr10 113656209 113656500 -26660265 + AluSx SINE Alu 1 299 -13 2440 87 0 0 chr10 113657526 113657837 -26658928 + AluY SINE Alu 1 311 0 283 374 19 24 chr10 113658160 113658371 -26658394 - L2 LINE L2 -943 2371 2162 2025 80 11 0 chr10 113658454 113658716 -26658049 - AluY SINE Alu -6 305 41 372 357 30 50 chr10 113658917 113659214 -26657551 + L2 LINE L2 2465 2755 -559 233 305 53 80 chr10 113659365 113659516 -26657249 + L2 LINE L2 2915 3061 -211 519 60 0 0 chr10 113659774 113659841 -26656924 + (TCTA)n Simple_repeat Simple_repeat 1 67 0 2238 109 10 0 chr10 113660497 113660801 -26655964 - AluSx SINE Alu -5 307 1 193 318 107 62 chr10 113660854 113661143 -26655622 + L2 LINE L2 1989 2290 -1024 25 65 0 0 chr10 113662362 113662408 -26654357 + AT_rich Low_complexity Low_complexity 1 46 0 278 285 29 44 chr10 113662579 113662716 -26654049 + L1ME LINE L1 5475 5609 -512 322 307 0 10 chr10 113663495 113663596 -26653169 + MIR SINE MIR 52 151 -111 313 261 200 30 chr10 113664690 113664855 -26651910 - MIR SINE MIR -3 259 67 439 224 20 34 chr10 113664909 113665056 -26651709 - Charlie1 DNA MER1_type -6 2755 2611 3197 93 19 7 chr10 113665087 113665519 -26651246 + LTR3b LTR ERVK 1 437 0 1029 128 50 173 chr10 113665531 113665820 -26650945 + Tigger3(Golem) DNA MER2_type 18 341 -2687 1862 148 0 0 chr10 113665820 113666097 -26650668 - AluSx SINE Alu -35 277 1 1029 128 50 173 chr10 113666097 113666163 -26650602 + Tigger3(Golem) DNA MER2_type 341 2984 -44 894 305 120 21 chr10 113670384 113671040 -26645725 + L1ME3A LINE L1 5437 6164 -6 468 255 96 70 chr10 113671269 113671540 -26645225 + L2 LINE L2 3035 3312 -1 2103 125 0 0 chr10 113672941 113673236 -26643529 + AluY SINE Alu 1 295 -16 1337 218 80 18 chr10 113673546 113673646 -26643119 + L1M4 LINE L1 2572 2664 -3482 243 0 0 0 chr10 113673646 113673673 -26643092 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1337 218 80 18 chr10 113673673 113674021 -26642744 + L1M4 LINE L1 2664 3048 -3098 214 357 50 14 chr10 113675243 113675383 -26641382 - L2 LINE L2 -586 2728 2584 30 27 0 0 chr10 113676242 113676279 -26640486 + AT_rich Low_complexity Low_complexity 1 37 0 515 376 90 22 chr10 113676608 113676975 -26639790 + L3 LINE CR1 1117 1508 -69 617 288 114 47 chr10 113677048 113677478 -26639287 + MLT1H LTR MaLR 78 536 -13 318 216 252 9 chr10 113678182 113678293 -26638472 - MIR SINE MIR -34 228 91 267 31 0 0 chr10 113678302 113678334 -26638431 + (CA)n Simple_repeat Simple_repeat 2 33 0 2052 137 0 19 chr10 113679807 113680122 -26636643 - AluSc SINE Alu 0 309 1 29 0 0 0 chr10 113680353 113680382 -26636383 + AT_rich Low_complexity Low_complexity 1 29 0 3894 153 37 8 chr10 113680382 113681339 -26635426 + L1PB3 LINE L1 4885 5877 -277 591 290 131 32 chr10 113681349 113681852 -26634913 + L2 LINE L2 2678 3312 -1 422 303 52 38 chr10 113682455 113682666 -26634099 + MIR SINE MIR 48 261 -1 181 286 54 0 chr10 113682661 113682717 -26634048 - MIR SINE MIR -1 261 203 * 1857 139 0 40 chr10 113682965 113683266 -26633499 - AluSx SINE Alu -23 289 1 392 320 57 21 chr10 113684007 113684201 -26632564 - MIR SINE MIR -56 206 6 29 47 0 0 chr10 113686009 113686052 -26630713 + AT_rich Low_complexity Low_complexity 1 43 0 206 294 141 0 chr10 113686197 113686282 -26630483 - MIR3 SINE MIR -2 206 110 347 319 35 0 chr10 113686336 113686452 -26630313 + L2 LINE L2 3190 3309 -4 277 197 26 0 chr10 113686639 113686715 -26630050 + GA-rich Low_complexity Low_complexity 4 81 0 268 306 9 18 chr10 113686715 113686826 -26629939 + A-rich Low_complexity Low_complexity 3 112 0 3695 193 22 35 chr10 113686826 113687645 -26629120 + L1MB4 LINE L1 5370 6177 -3 2378 57 0 0 chr10 113688567 113688872 -26627893 - AluY SINE Alu 0 305 1 6163 22 0 3 chr10 113689026 113689746 -26627019 - L1PA3 LINE L1 -1 6154 5437 1238 19 0 0 chr10 113689746 113689901 -26626864 + L1P LINE L1 5275 5429 -726 223 175 16 16 chr10 113690054 113690117 -26626648 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1660 182 0 38 chr10 113690654 113690967 -26625798 - AluJb SINE Alu -11 301 1 2016 124 3 3 chr10 113690991 113691307 -26625458 + AluSp SINE Alu 1 316 0 23 0 0 0 chr10 113693319 113693342 -26623423 + AT_rich Low_complexity Low_complexity 1 23 0 210 355 66 0 chr10 113693634 113693710 -26623055 + MIR3 SINE MIR 104 184 -24 250 324 48 29 chr10 113693898 113694003 -26622762 - MIR SINE MIR -65 143 37 1695 167 67 76 chr10 113694108 113694544 -26622221 + L1MA7 LINE L1 5854 6285 -6 270 176 0 0 chr10 113694626 113694677 -26622088 + (TG)n Simple_repeat Simple_repeat 1 51 0 228 145 53 26 chr10 113695149 113695225 -26621540 + L1ME4a LINE L1 6041 6118 -3 198 259 24 71 chr10 113696315 113696400 -26620365 + MIR SINE MIR 105 185 -77 246 62 0 0 chr10 113696960 113696992 -26619773 + (TG)n Simple_repeat Simple_repeat 1 32 0 419 298 10 67 chr10 113697025 113697233 -26619532 + MLT1G LTR MaLR 217 412 -178 2446 72 0 0 chr10 113697315 113697620 -26619145 - AluY SINE Alu -6 305 1 228 305 25 68 chr10 113697985 113698132 -26618633 + MIR SINE MIR 72 210 -52 307 263 22 26 chr10 113699038 113699171 -26617594 + MIR SINE MIR 71 200 -62 2178 104 27 0 chr10 113699318 113699617 -26617148 - AluSp SINE Alu -6 307 1 295 326 83 28 chr10 113700904 113701048 -26615717 - MER5B DNA MER1_type -26 152 1 339 253 22 22 chr10 113701420 113701511 -26615254 - MIR SINE MIR -68 140 50 559 248 85 7 chr10 113702456 113702609 -26614156 - MLT1H LTR MaLR -250 299 135 290 364 6 19 chr10 113702809 113702971 -26613794 + L3 LINE CR1 714 873 -704 1451 344 18 8 chr10 113703063 113703685 -26613080 - MLT2E LTR ERVL 0 628 1 1585 200 43 58 chr10 113703909 113704324 -26612441 + MLT2D LTR ERVL 1 409 -5 616 237 43 34 chr10 113704422 113704629 -26612136 - MER3 DNA MER1_type 0 209 1 21 0 0 0 chr10 113705377 113705398 -26611367 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 113705433 113705461 -26611304 + AT_rich Low_complexity Low_complexity 1 28 0 298 289 123 27 chr10 113705715 113705902 -26610863 - Charlie8 DNA MER1_type -2152 265 61 833 205 102 39 chr10 113706168 113706373 -26610392 + MER20 DNA MER1_type 1 218 -1 759 168 15 0 chr10 113706689 113706820 -26609945 - L1MC1 LINE L1 -14 6319 6187 1657 154 52 0 chr10 113707017 113707284 -26609481 + AluSx SINE Alu 1 281 -31 2221 123 0 3 chr10 113707306 113707614 -26609151 + AluSx SINE Alu 1 307 -5 686 219 24 43 chr10 113707614 113707778 -26608987 + MER58B DNA MER1_type 181 341 0 667 298 28 6 chr10 113707793 113707971 -26608794 + MER5A DNA MER1_type 8 189 0 246 273 30 50 chr10 113707980 113708079 -26608686 - MER5A DNA MER1_type -1 188 92 574 259 30 9 chr10 113708582 113708814 -26607951 - L1MDa LINE L1 -3764 2776 2540 4546 224 16 6 chr10 113708820 113709971 -26606794 + L1 LINE L1 4125 5286 -860 4211 134 29 8 chr10 113709965 113710719 -26606046 + L1PA16 LINE L1 5353 6157 -9 * 1127 230 128 49 chr10 113710739 113710985 -26605780 - L1MDa LINE L1 -4011 2529 2304 9584 92 25 4 chr10 113710985 113713165 -26603600 - L1PA7 LINE L1 -3 6151 3942 1127 230 128 49 chr10 113713165 113713552 -26603213 - L1MDa LINE L1 -4236 2304 1846 412 305 21 47 chr10 113714919 113715109 -26601656 - MIR SINE MIR -58 204 20 2545 212 23 2 chr10 113715327 113715798 -26600967 + Tigger7 DNA MER2_type 1 481 -2006 256 154 0 0 chr10 113715805 113715844 -26600921 + Tigger7 DNA MER2_type 1017 1055 -1432 * 1549 161 33 27 chr10 113715839 113716138 -26600627 + Tigger7 DNA MER2_type 2286 2586 -1 2214 108 3 0 chr10 113716295 113716591 -26600174 - AluSp SINE Alu -16 297 1 237 379 48 19 chr10 113717151 113717254 -26599511 - L2 LINE L2 -33 3239 3134 629 261 204 68 chr10 113717276 113717408 -26599357 - LTR16A LTR ERVL 0 450 337 2028 131 29 29 chr10 113717408 113717783 -26598982 - THE1C LTR MaLR 0 375 1 629 261 204 68 chr10 113717783 113718033 -26598732 - LTR16A LTR ERVL -113 337 16 304 338 63 28 chr10 113718114 113718256 -26598509 - L2 LINE L2 -187 3085 2939 183 343 10 10 chr10 113718380 113718479 -26598286 - L2 LINE L2 -568 2746 2648 262 228 89 0 chr10 113718613 113718692 -26598073 - MIR SINE MIR -48 214 129 306 339 104 0 chr10 113718709 113718824 -26597941 - MIR SINE MIR -108 154 28 459 279 43 7 chr10 113719331 113719471 -26597294 - MLT1J2 LTR MaLR -281 169 25 198 0 0 0 chr10 113720550 113720572 -26596193 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 4600 21 0 0 chr10 113720572 113721100 -26595665 - L1PA3 LINE L1 -7 6148 5621 4320 19 0 0 chr10 113721104 113721895 -26594870 + L1P1 LINE L1 4877 5667 -488 183 139 0 0 chr10 113722062 113722098 -26594667 + (CAT)n Simple_repeat Simple_repeat 3 38 0 298 292 34 0 chr10 113722103 113722192 -26594573 - MIR SINE MIR -10 252 161 1203 198 130 16 chr10 113723195 113723503 -26593262 + MER2 DNA MER2_type 2 344 0 233 204 0 0 chr10 113724779 113724823 -26591942 + (CA)n Simple_repeat Simple_repeat 1 44 0 2144 113 7 0 chr10 113725204 113725506 -26591259 + AluSc SINE Alu 1 304 -5 1362 153 54 25 chr10 113725777 113726061 -26590704 + MER1B DNA MER1_type 1 333 0 210 330 100 40 chr10 113726897 113726997 -26589768 - MER5A DNA MER1_type -83 106 1 201 316 0 51 chr10 113727256 113727335 -26589430 - MIR SINE MIR -116 146 72 429 158 0 0 chr10 113727666 113727748 -26589017 + GA-rich Low_complexity Low_complexity 2 83 0 182 37 37 0 chr10 113727850 113727877 -26588888 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 437 247 0 0 chr10 113728365 113728454 -26588311 + HERV16 LTR ERVL 343 431 -4565 357 345 123 24 chr10 113729052 113729466 -26587299 + LTR16A1 LTR ERVL 3 457 0 1252 200 0 0 chr10 113730212 113730432 -26586333 + AluJo SINE Alu 1 220 -92 370 300 129 12 chr10 113731419 113731589 -26585176 + MIR SINE MIR 20 209 -53 704 133 0 50 chr10 113731723 113731843 -26584922 - FLAM_A SINE Alu -17 125 12 187 376 93 20 chr10 113732252 113732499 -26584266 - L2 LINE L2 -424 2890 2626 * 234 246 16 16 chr10 113732482 113732543 -26584222 + MIR SINE MIR 93 153 -109 1093 185 40 61 chr10 113733378 113733675 -26583090 + MER33 DNA MER1_type 2 292 -32 451 250 6 39 chr10 113734124 113734280 -26582485 - L1ME4a LINE L1 -237 5884 5734 253 297 34 34 chr10 113734759 113734877 -26581888 + MIR SINE MIR 129 246 -16 1156 223 152 77 chr10 113736577 113737058 -26579707 - MER21A LTR ERV1 -410 521 5 277 239 0 18 chr10 113737062 113737171 -26579594 + (TA)n Simple_repeat Simple_repeat 1 107 0 341 385 61 18 chr10 113737278 113737608 -26579157 + L2 LINE L2 2970 3313 0 645 316 60 71 chr10 113738201 113738968 -26577797 - L1ME3A LINE L1 -206 5964 5200 412 300 53 88 chr10 113739202 113739522 -26577243 - MER102b DNA MER1_type 0 341 33 423 263 6 81 chr10 113740118 113740278 -26576487 - MER5B DNA MER1_type -30 148 1 308 59 39 39 chr10 113741119 113741170 -26575595 + L2 LINE L2 3262 3312 -1 755 298 85 78 chr10 113741517 113742175 -26574590 + MLT2F LTR ERVL 1 663 0 291 331 25 19 chr10 113742178 113742338 -26574427 + ERVL-F LTR ERVL 4 164 -5600 580 348 26 40 chr10 113742413 113743054 -26573711 + ERVL-F LTR ERVL 282 990 -4774 21 0 0 0 chr10 113743054 113743075 -26573690 + AT_rich Low_complexity Low_complexity 1 21 0 1590 116 35 0 chr10 113743078 113743338 -26573427 + AluSp SINE Alu 44 311 0 584 293 66 68 chr10 113743572 113744043 -26572722 + L1MCb LINE L1 -136 333 -5574 2191 281 87 34 chr10 113744282 113745964 -26570801 + L1MCb LINE L1 432 2204 -4222 25 31 0 0 chr10 113746003 113746035 -26570730 + AT_rich Low_complexity Low_complexity 1 32 0 1510 220 30 14 chr10 113746036 113746438 -26570327 + L1ME2 LINE L1 5451 5865 -299 279 200 82 0 chr10 113746405 113746490 -26570275 + L1MC3 LINE L1 7005 7096 -689 * 268 258 0 15 chr10 113746538 113746604 -26570161 + MLT1F1 LTR MaLR 47 111 -456 1758 202 79 15 chr10 113746604 113747010 -26569755 + L1MC3 LINE L1 7177 7608 -177 373 246 135 19 chr10 113747024 113747292 -26569473 + L1MCb LINE L1 2318 2669 -3938 426 347 36 18 chr10 113747348 113747570 -26569195 - MIR SINE MIR -11 251 26 578 216 9 0 chr10 113747827 113747943 -26568822 - FLAM_A SINE Alu -14 119 3 270 342 60 13 chr10 113747978 113748127 -26568638 - MIR3 SINE MIR -11 197 42 2711 16 0 3 chr10 113748292 113748597 -26568168 + AluY SINE Alu 1 304 -7 401 195 0 0 chr10 113748597 113748674 -26568091 - L1PB4 LINE L1 -19 6137 6061 2945 98 22 22 chr10 113749551 113750012 -26566753 - L1PA10 LINE L1 -5 6163 5703 424 285 46 121 chr10 113750759 113751149 -26565616 - LTR67 LTR ERVL -5 552 192 1046 224 93 47 chr10 113751542 113751856 -26564909 + MLT1A1 LTR MaLR 1 334 -31 1672 160 29 47 chr10 113751856 113752199 -26564566 - MER44D DNA MER2_type -2 607 1 1046 224 93 47 chr10 113752199 113752227 -26564538 + MLT1A1 LTR MaLR 334 359 -6 225 0 0 0 chr10 113752650 113752675 -26564090 + (CA)n Simple_repeat Simple_repeat 1 25 0 339 25 0 0 chr10 113753376 113753416 -26563349 + (CA)n Simple_repeat Simple_repeat 2 41 0 451 321 43 14 chr10 113753730 113753939 -26562826 - MLT1L LTR MaLR -2 613 399 2194 22 11 15 chr10 113754137 113754409 -26562356 + L1PA3 LINE L1 5885 6155 0 1504 199 21 3 chr10 113755787 113756114 -26560651 - L1MB3 LINE L1 -1 6182 5850 246 359 26 0 chr10 113757019 113757097 -26559668 - MIR SINE MIR -182 80 1 3215 253 123 18 chr10 113757732 113758319 -26558446 + L1MC4 LINE L1 6449 6973 -1069 1854 152 3 13 chr10 113758319 113758634 -26558131 + AluJb SINE Alu 1 312 0 3215 253 123 18 chr10 113758634 113759357 -26557408 + L1MC4 LINE L1 6973 7897 -145 524 198 10 0 chr10 113759394 113759490 -26557275 - Tigger7 DNA MER2_type -1 2586 2490 * 1365 179 48 24 chr10 113759489 113759741 -26557024 - Tigger7 DNA MER2_type -466 267 10 249 275 46 38 chr10 113759758 113759889 -26556876 + L1MC4 LINE L1 7911 8042 0 901 298 96 40 chr10 113760833 113761259 -26555506 + MLT1E LTR MaLR 1 450 -143 32 43 0 0 chr10 113761730 113761776 -26554989 + AT_rich Low_complexity Low_complexity 1 46 0 189 214 0 0 chr10 113762224 113762266 -26554499 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 5111 158 59 8 chr10 113762408 113763858 -26552907 + L1MA8 LINE L1 4777 6288 -3 384 326 77 14 chr10 113764235 113764456 -26552309 - MIR SINE MIR 0 262 28 369 291 26 98 chr10 113765192 113765426 -26551339 + MIR SINE MIR 36 252 -10 263 270 103 40 chr10 113765852 113765978 -26550787 + MIR3 SINE MIR 60 193 -15 266 278 28 0 chr10 113766208 113766280 -26550485 + MLT1J2 LTR MaLR 263 336 -114 240 264 0 0 chr10 113767295 113767382 -26549383 + G-rich Low_complexity Low_complexity 2 88 0 239 170 64 0 chr10 113767628 113767675 -26549090 + CT-rich Low_complexity Low_complexity 5 54 0 259 333 81 16 chr10 113767796 113767919 -26548846 - MIR SINE MIR -59 149 19 285 354 88 6 chr10 113768442 113768623 -26548142 - LTR16A LTR ERVL -23 427 232 187 309 25 12 chr10 113769164 113769245 -26547520 - MIR SINE MIR -93 115 34 2956 93 25 16 chr10 113769271 113769711 -26547054 - MLT2A1 LTR ERVL 0 444 1 10806 66 2 9 chr10 113769711 113771159 -26545606 - HERVL-A1 LTR ERVL 0 5654 4217 7684 64 15 6 chr10 113771156 113772178 -26544587 - HERVL-A1 LTR ERVL -1561 4093 3063 * 2627 101 77 7 chr10 113772192 113772240 -26544525 - MLT2A1 LTR ERVL 0 444 401 540 45 0 0 chr10 113772240 113772307 -26544458 + (CA)n Simple_repeat Simple_repeat 2 68 0 2627 101 77 7 chr10 113772307 113772673 -26544092 - MLT2A1 LTR ERVL -43 401 1 229 355 13 0 chr10 113773227 113773303 -26543462 + L2 LINE L2 3201 3277 -36 1745 124 43 122 chr10 113773378 113773773 -26542992 - THE1B LTR MaLR 0 364 1 24 32 0 0 chr10 113774093 113774124 -26542641 + AT_rich Low_complexity Low_complexity 1 31 0 278 273 62 55 chr10 113774838 113774966 -26541799 - L2 LINE L2 -1 3312 3184 248 239 23 57 chr10 113774967 113775055 -26541710 + GA-rich Low_complexity Low_complexity 3 87 0 290 266 75 0 chr10 113775144 113775238 -26541527 - MIR SINE MIR -42 220 120 207 161 0 0 chr10 113775248 113775286 -26541479 + (CAA)n Simple_repeat Simple_repeat 1 38 0 455 253 94 61 chr10 113775322 113775615 -26541150 - MIR SINE MIR -23 185 10 294 106 0 0 chr10 113775986 113776033 -26540732 + (TG)n Simple_repeat Simple_repeat 1 47 0 214 342 61 9 chr10 113776287 113776401 -26540364 - MIR SINE MIR -90 172 53 316 261 23 0 chr10 113776526 113776614 -26540151 + MER94 DNA DNA 4 93 -41 372 345 17 0 chr10 113776824 113776943 -26539822 + L2 LINE L2 3150 3270 -2 1905 98 0 0 chr10 113777137 113777383 -26539382 - AluSq SINE Alu -9 304 59 184 330 57 38 chr10 113777619 113777725 -26539040 + MIR3 SINE MIR 4 111 -97 690 171 50 0 chr10 113779058 113779198 -26537567 - MLT1B LTR MaLR -4 386 240 199 320 111 46 chr10 113779689 113779842 -26536923 - MIR SINE MIR -6 256 94 245 114 51 2 chr10 113779842 113779906 -26536859 - MLT2B1 LTR ERVL 0 520 451 204 40 0 0 chr10 113779906 113779931 -26536834 + (AATAG)n Simple_repeat Simple_repeat 5 29 0 2085 201 46 29 chr10 113779932 113780410 -26536355 - MLT2B1 LTR ERVL -34 486 1 211 318 12 59 chr10 113780413 113780498 -26536267 - MIR SINE MIR -112 96 16 7455 34 1 0 chr10 113781277 113782426 -26534339 + L1PA4 LINE L1 5029 6178 0 608 264 130 14 chr10 113783353 113783569 -26533196 - MIR SINE MIR -6 256 16 2062 154 0 0 chr10 113784177 113784488 -26532277 + AluSx SINE Alu 1 311 -1 322 237 65 11 chr10 113785517 113785610 -26531155 + MIR3 SINE MIR 87 184 -24 180 176 0 0 chr10 113787650 113787684 -26529081 + (CATA)n Simple_repeat Simple_repeat 2 35 0 344 70 0 18 chr10 113788694 113788751 -26528014 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1865 130 3 41 chr10 113788753 113789046 -26527719 - AluSx SINE Alu -30 282 1 190 306 35 81 chr10 113790375 113790548 -26526217 + L3 LINE CR1 1378 1542 -35 419 284 104 18 chr10 113790609 113790766 -26525999 - MIR3 SINE MIR -64 144 15 286 245 32 32 chr10 113791310 113791404 -26525361 + CT-rich Low_complexity Low_complexity 3 96 0 297 75 0 0 chr10 113791483 113791523 -26525242 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2000 130 31 57 chr10 113791561 113791946 -26524819 + THE1C LTR MaLR 1 375 0 553 333 41 0 chr10 113792066 113792261 -26524504 - MIR SINE MIR -19 243 41 293 326 45 54 chr10 113792615 113792836 -26523929 - MIR SINE MIR -22 240 22 285 250 0 0 chr10 113795519 113795534 -26521231 + MER3 DNA MER1_type 33 47 -162 892 189 30 30 chr10 113795534 113795735 -26521030 - MER3 DNA MER1_type 0 209 9 474 304 14 0 chr10 113796873 113797021 -26519744 - MIR SINE MIR -3 259 110 994 185 54 58 chr10 113797023 113797103 -26519662 - Tigger2 DNA MER2_type 0 2718 2639 5938 18 0 0 chr10 113797103 113797778 -26518987 + L1PA3 LINE L1 5481 6155 0 994 185 54 58 chr10 113797778 113797956 -26518809 - Tigger2 DNA MER2_type -79 2639 2461 3923 167 42 7 chr10 113798001 113798739 -26518026 - Tigger2 DNA MER2_type -1953 765 2 293 346 10 0 chr10 113798743 113798844 -26517921 - MIR SINE MIR -156 106 5 273 341 11 11 chr10 113799834 113799925 -26516840 - L2 LINE L2 -18 3254 3164 1788 146 3 58 chr10 113800874 113801209 -26515556 - AluSg SINE Alu 0 319 1 3084 187 75 38 chr10 113801717 113802338 -26514427 - L1MC1 LINE L1 -6 6327 5664 2302 109 0 0 chr10 113802338 113802631 -26514134 + AluSp SINE Alu 3 295 -18 3084 187 75 38 chr10 113802631 113802858 -26513907 - L1MC1 LINE L1 -669 5664 5447 1678 213 3 11 chr10 113802890 113803256 -26513509 + MLT1A1 LTR MaLR 3 365 0 208 267 0 17 chr10 113804274 113804334 -26512431 - L2 LINE L2 -2262 1052 994 243 0 0 0 chr10 113805217 113805244 -26511521 + (CA)n Simple_repeat Simple_repeat 1 27 0 375 83 0 0 chr10 113805323 113805383 -26511382 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 339 286 128 56 chr10 113805853 113806157 -26510608 - L1M2 LINE L1 -5685 1164 839 1310 231 25 3 chr10 113807480 113807839 -26508926 - L1MC3 LINE L1 -1140 6645 6279 271 240 10 10 chr10 113807846 113807946 -26508819 + (TA)n Simple_repeat Simple_repeat 1 100 0 595 291 12 18 chr10 113809389 113809554 -26507211 + MER58A DNA MER1_type 3 166 0 2375 134 5 11 chr10 113809554 113809928 -26506837 - THE1C LTR MaLR -2 373 2 9118 121 42 37 chr10 113809929 113811489 -26505276 - THE1C-int LTR MaLR -13 1567 1 2245 106 86 11 chr10 113811489 113811838 -26504927 - THE1C LTR MaLR 0 375 1 225 220 18 147 chr10 113811953 113812062 -26504703 + L2 LINE L2 3177 3271 -42 182 388 54 20 chr10 113813214 113813361 -26503404 - L2 LINE L2 -420 2894 2743 300 258 175 8 chr10 113813684 113813804 -26502961 + MIR SINE MIR 8 147 -115 2055 184 6 0 chr10 113815084 113815442 -26501323 - MLT2B1 LTR ERVL -159 361 2 213 167 28 0 chr10 113816386 113816422 -26500343 + L2 LINE L2 3263 3299 -14 743 224 24 31 chr10 113816777 113817032 -26499733 - MLT2D LTR ERVL -159 255 3 180 176 0 0 chr10 113817034 113817068 -26499697 + (CACCAT)n Simple_repeat Simple_repeat 5 38 0 339 351 9 18 chr10 113817606 113817717 -26499048 - L2 LINE L2 -22 3291 3182 1269 194 49 91 chr10 113817827 113818213 -26498552 - MLT1A2 LTR MaLR -4 370 1 202 280 0 0 chr10 113818379 113818429 -26498336 + L2 LINE L2 3262 3311 -2 312 314 81 0 chr10 113819528 113819652 -26497113 - MIR SINE MIR -38 224 91 1371 143 0 14 chr10 113819707 113819916 -26496849 + THE1C LTR MaLR 5 210 -165 7261 115 5 3 chr10 113819916 113820957 -26495808 + THE1C-int LTR MaLR 538 1580 0 1832 142 52 35 chr10 113820960 113821326 -26495439 + THE1C LTR MaLR 4 375 0 1426 216 22 43 chr10 113821479 113821850 -26494915 - MLT1A1 LTR MaLR -2 363 1 1975 149 3 0 chr10 113822492 113822812 -26493953 - AluSx SINE Alu 0 321 1 22 0 0 0 chr10 113822906 113822928 -26493837 + AT_rich Low_complexity Low_complexity 1 22 0 5435 141 25 51 chr10 113823038 113823916 -26492849 - L1PB1 LINE L1 0 6867 6062 236 30 30 0 chr10 113823916 113823949 -26492816 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5435 141 25 51 chr10 113823949 113824647 -26492118 - L1PB1 LINE L1 -805 6062 5347 3674 128 15 7 chr10 113824645 113825828 -26490937 - L1PB1 LINE L1 -3328 3534 2297 * 2136 109 10 7 chr10 113826557 113826861 -26489904 + AluSq SINE Alu 7 311 -2 270 0 0 0 chr10 113827367 113827397 -26489368 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2179 154 16 10 chr10 113827686 113828069 -26488696 + L1MA6 LINE L1 5398 5782 -509 634 190 49 7 chr10 113828111 113828253 -26488512 + L1MA6 LINE L1 5875 6022 -278 2324 45 0 0 chr10 113828275 113828562 -26488203 - L1PA4 LINE L1 -3 6152 5866 1710 30 0 0 chr10 113828562 113828762 -26488003 + L1PA4 LINE L1 5662 5861 -294 1017 193 75 2 chr10 113828742 113828968 -26487797 + L1MA8 LINE L1 5988 6245 -67 * 393 22 0 0 chr10 113828968 113829014 -26487751 + (TA)n Simple_repeat Simple_repeat 1 46 0 1017 193 75 2 chr10 113829014 113829086 -26487679 + L1MA8 LINE L1 6245 6310 -2 550 209 30 0 chr10 113831446 113831580 -26485185 + L1M4 LINE L1 35 172 -6370 2238 270 68 41 chr10 113831586 113832441 -26484324 + L1M4 LINE L1 1063 1893 -4753 1849 115 40 102 chr10 113832441 113832841 -26483924 + THE1C LTR MaLR 1 375 0 2238 270 68 41 chr10 113832841 113833526 -26483239 + L1M4 LINE L1 1893 2762 -3884 1863 152 0 17 chr10 113833527 113833824 -26482941 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 113833885 113833915 -26482850 + AT_rich Low_complexity Low_complexity 1 30 0 1992 251 53 14 chr10 113833959 113834745 -26482020 + L1M4 LINE L1 2823 3639 -3005 193 304 0 0 chr10 113834787 113834833 -26481932 + MER5B DNA MER1_type 132 177 -1 610 127 8 25 chr10 113836125 113836243 -26480522 + (GGAAA)n Simple_repeat Simple_repeat 3 118 0 252 0 0 0 chr10 113836614 113836642 -26480123 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 5318 43 0 6 chr10 113836651 113837302 -26479463 - L1PA3 LINE L1 0 6155 5509 6427 31 6 0 chr10 113837302 113838251 -26478514 + L1P1 LINE L1 4624 5583 -572 2431 137 25 55 chr10 113838583 113839022 -26477743 - MSTB1 LTR MaLR -6 426 1 206 269 43 43 chr10 113839716 113839809 -26476956 + MIR SINE MIR 130 222 -40 293 338 27 14 chr10 113840970 113841118 -26475647 + MIR SINE MIR 8 157 -105 1617 182 6 26 chr10 113841607 113841920 -26474845 + AluJb SINE Alu 3 309 -3 25 51 0 0 chr10 113842376 113842415 -26474350 + AT_rich Low_complexity Low_complexity 1 39 0 232 328 26 17 chr10 113843221 113843337 -26473428 + L2 LINE L2 2728 2844 -470 28 0 0 0 chr10 113843520 113843548 -26473217 + AT_rich Low_complexity Low_complexity 1 28 0 491 273 30 30 chr10 113843663 113843795 -26472970 + L2 LINE L2 3180 3311 -2 41041 67 5 0 chr10 113844045 113850161 -26466604 + L1PA5 LINE L1 11 6154 0 1699 182 3 3 chr10 113851376 113851684 -26465081 + AluJo SINE Alu 5 312 0 243 103 0 0 chr10 113852223 113852262 -26464503 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 274 285 45 119 chr10 113853004 113853336 -26463429 + LTR16B LTR ERVL 21 300 -164 1288 185 33 15 chr10 113853535 113853805 -26462960 - L1MC3 LINE L1 -1167 6618 6344 4983 224 58 14 chr10 113853843 113855093 -26461672 - L1MC3 LINE L1 -1164 7119 5815 3562 211 56 23 chr10 113855097 113856166 -26460599 - L1MB5 LINE L1 0 6174 5072 654 258 59 3 chr10 113856172 113856459 -26460306 - L1MC3 LINE L1 -829 5815 5513 268 276 35 35 chr10 113856435 113856663 -26460102 - L1MC3 LINE L1 -3533 3111 2884 * 238 303 49 0 chr10 113856658 113856780 -26459985 - L1MC3 LINE L1 -4814 1830 1703 * 499 312 75 20 chr10 113856782 113857063 -26459702 - L1MC3 LINE L1 -4972 1570 1299 225 239 15 0 chr10 113857065 113857132 -26459633 - L1MC3 LINE L1 -5294 1340 1273 252 174 43 43 chr10 113857816 113857885 -26458880 - MER5B DNA MER1_type -105 73 5 1127 165 119 12 chr10 113858133 113858376 -26458389 - THE1C LTR MaLR 0 375 107 4586 126 22 6 chr10 113858413 113859097 -26457668 + THE1C-int LTR MaLR 884 1578 -2 1890 152 58 22 chr10 113859102 113859464 -26457301 + THE1C LTR MaLR 1 375 0 214 295 0 32 chr10 113860557 113860652 -26456113 + T-rich Low_complexity Low_complexity 2 93 0 240 65 0 0 chr10 113860676 113860707 -26456058 + LTR48B LTR ERV1 1 31 -613 2144 198 129 11 chr10 113860707 113861228 -26455537 + MER39 LTR ERV1 85 666 -41 248 111 22 0 chr10 113861449 113861494 -26455271 + CT-rich Low_complexity Low_complexity 1 46 0 249 300 78 0 chr10 113861981 113862071 -26454694 + LTR50 LTR ERVL 4 100 -695 352 227 2 41 chr10 113862085 113862225 -26454540 - L1MD3 LINE L1 -49 7923 7626 333 365 16 0 chr10 113862470 113862596 -26454169 + LTR16A LTR ERVL 125 252 -198 23 0 0 0 chr10 113862802 113862825 -26453940 + AT_rich Low_complexity Low_complexity 1 23 0 244 322 0 0 chr10 113863780 113863839 -26452926 - MIR SINE MIR -105 103 45 601 300 147 19 chr10 113864197 113864504 -26452261 - LTR16A LTR ERVL -6 444 99 1013 156 37 166 chr10 113864632 113865035 -26451730 + MER4C LTR ERV1 151 465 0 264 348 166 12 chr10 113865035 113865282 -26451483 - L2 LINE L2 -1329 1985 1701 237 337 0 50 chr10 113865739 113865839 -26450926 - MIR SINE MIR -62 146 54 456 19 0 0 chr10 113865898 113865951 -26450814 + (CA)n Simple_repeat Simple_repeat 2 54 0 2454 154 5 5 chr10 113865996 113866404 -26450361 + MER4D LTR ERV1 3 410 -462 723 150 8 0 chr10 113866404 113866524 -26450241 + MER4D LTR ERV1 288 408 -464 2083 175 89 53 chr10 113866525 113867073 -26449692 + LTR49 LTR ERV1 3 570 -25 2904 136 22 0 chr10 113867103 113867560 -26449205 + MER4D LTR ERV1 437 903 0 2851 190 85 8 chr10 113867632 113868291 -26448474 + MER67C LTR ERV1 1 710 0 39 38 0 0 chr10 113868570 113868623 -26448142 + AT_rich Low_complexity Low_complexity 1 53 0 353 326 65 9 chr10 113868623 113868853 -26447912 + HAL1b LINE L1 247 489 -859 9398 102 11 1 chr10 113868948 113871108 -26445657 + L1PA8 LINE L1 3985 6167 -5 245 176 106 35 chr10 113871109 113871194 -26445571 + HAL1b LINE L1 748 838 -510 244 253 146 38 chr10 113871222 113871380 -26445385 + HAL1b LINE L1 975 1149 -199 316 329 104 51 chr10 113871709 113872025 -26444740 - L1MC4a LINE L1 -1795 6013 5681 33742 95 8 32 chr10 113872109 113877500 -26439265 + L1P LINE L1 11 5273 -873 227 252 10 87 chr10 113879849 113879952 -26436813 + L1M4 LINE L1 4062 4156 -1990 536 236 9 0 chr10 113880285 113880395 -26436370 + AluJb SINE Alu 2 112 -200 189 0 0 0 chr10 113880395 113880416 -26436349 + (TC)n Simple_repeat Simple_repeat 2 22 0 27 0 0 0 chr10 113880416 113880443 -26436322 + AT_rich Low_complexity Low_complexity 1 27 0 260 234 31 0 chr10 113880462 113880526 -26436239 + AluSp SINE Alu 131 196 -107 275 86 69 0 chr10 113880526 113880584 -26436181 + (TA)n Simple_repeat Simple_repeat 2 63 0 631 78 28 50 chr10 113880590 113880769 -26435996 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 279 35 52 35 chr10 113880770 113880828 -26435937 + (TTATA)n Simple_repeat Simple_repeat 4 62 0 510 77 77 18 chr10 113880845 113881014 -26435751 + (TA)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr10 113881020 113881043 -26435722 + AT_rich Low_complexity Low_complexity 1 23 0 1148 254 18 0 chr10 113881050 113881388 -26435377 + L1MB1 LINE L1 3412 3755 -2391 435 241 31 6 chr10 113881391 113881553 -26435212 + (TA)n Simple_repeat Simple_repeat 1 166 0 1165 188 12 0 chr10 113881574 113881814 -26434951 + L1MB1 LINE L1 5476 5718 -450 432 0 0 0 chr10 113881900 113881948 -26434817 + (TA)n Simple_repeat Simple_repeat 1 48 0 1740 197 19 0 chr10 113882082 113882457 -26434308 + L1MB1 LINE L1 5787 6168 0 402 289 42 78 chr10 113883395 113883679 -26433086 + Charlie8 DNA MER1_type 2 275 -2142 708 292 157 34 chr10 113884133 113884694 -26432071 - LTR50 LTR ERVL -165 630 1 207 287 117 49 chr10 113884802 113884917 -26431848 - MIR SINE MIR -65 143 24 250 272 5 163 chr10 113885339 113885523 -26431242 - MER91B DNA MER1_type -32 158 4 351 309 53 64 chr10 113886360 113886548 -26430217 - MIR3 SINE MIR -10 198 13 3306 125 9 75 chr10 113886640 113886836 -26429929 - MER4A LTR ERV1 0 600 393 2185 87 17 13 chr10 113886836 113887134 -26429631 + AluY SINE Alu 1 299 -12 3306 125 9 75 chr10 113887134 113887579 -26429186 - MER4A LTR ERV1 -207 393 1 2801 181 37 59 chr10 113888055 113888762 -26428003 + LTR8 LTR ERV1 1 691 0 514 357 25 16 chr10 113889522 113889766 -26426999 + MIR SINE MIR 3 248 -14 191 250 0 0 chr10 113890639 113890683 -26426082 + MIR SINE MIR 154 197 -65 300 324 151 32 chr10 113890895 113891080 -26425685 - MIR SINE MIR -32 230 24 232 357 43 7 chr10 113891583 113891723 -26425042 + MIR SINE MIR 46 190 -72 1887 156 40 0 chr10 113892449 113892770 -26423995 + LTR28 LTR ERV1 1 334 -686 1432 192 114 82 chr10 113893163 113893452 -26423313 + MLT1D LTR MaLR 1 279 -226 2682 162 50 26 chr10 113893452 113894033 -26422732 - LTR49 LTR ERV1 0 595 1 1432 192 114 82 chr10 113894033 113894143 -26422622 + MLT1D LTR MaLR 279 384 -121 2138 147 0 0 chr10 113894143 113894455 -26422310 + AluSx SINE Alu 1 312 0 1432 192 114 82 chr10 113894455 113894543 -26422222 + MLT1D LTR MaLR 384 505 0 356 237 46 38 chr10 113894551 113894590 -26422175 - MLT1K LTR MaLR -63 525 488 2167 247 68 92 chr10 113894590 113895218 -26421547 + MER50 LTR ERV1 1 610 -124 1815 131 57 3 chr10 113895218 113895500 -26421265 - AluSc SINE Alu -12 297 1 2167 247 68 92 chr10 113895500 113895623 -26421142 + MER50 LTR ERV1 610 734 0 356 237 46 38 chr10 113895623 113895714 -26421051 - MLT1K LTR MaLR -100 488 394 487 303 77 27 chr10 113895812 113896033 -26420732 - MLT1K LTR MaLR -323 265 34 1449 174 48 61 chr10 113897115 113897426 -26419339 + AluJo SINE Alu 1 307 -5 522 316 63 5 chr10 113898194 113898400 -26418365 + MLT2F LTR ERVL 8 225 -438 276 315 0 87 chr10 113898521 113898648 -26418117 - L2 LINE L2 -20 3252 3137 1547 202 42 16 chr10 113899049 113899430 -26417335 + L1MA9 LINE L1 5922 6312 0 2049 116 3 10 chr10 113900388 113900682 -26416083 - AluSc SINE Alu -15 294 3 327 25 0 0 chr10 113902503 113902543 -26414222 + (CA)n Simple_repeat Simple_repeat 1 40 0 1927 265 62 17 chr10 113903919 113904729 -26412036 + L1MB8 LINE L1 5323 6168 -10 330 274 67 124 chr10 113905442 113905506 -26411259 + L2 LINE L2 2264 2330 -984 664 263 0 24 chr10 113905506 113905719 -26411046 + MER3 DNA MER1_type 2 209 0 330 274 67 124 chr10 113905719 113905946 -26410819 + L2 LINE L2 2330 2514 -800 1591 118 66 0 chr10 113905946 113906218 -26410547 - L1PB3 LINE L1 0 6154 5865 330 274 67 124 chr10 113906218 113906447 -26410318 + L2 LINE L2 2514 2755 -559 2047 154 66 57 chr10 113906539 113907027 -26409738 + LTR22B LTR ERVK 1 492 0 253 348 101 7 chr10 113907199 113907337 -26409428 + MIR SINE MIR 102 252 -10 1133 181 157 70 chr10 113907340 113907754 -26409011 + LTR7 LTR ERV1 1 450 0 697 115 0 0 chr10 113907754 113907858 -26408907 + HERVH LTR ERV1 1 104 -7609 * 5742 142 10 5 chr10 113907856 113908825 -26407940 + HERVH LTR ERV1 1352 2325 -5388 1520 128 46 11 chr10 113908825 113909106 -26407659 + LTR7 LTR ERV1 160 450 0 2750 239 68 21 chr10 113909205 113909997 -26406768 - MER21B LTR ERV1 -16 847 19 270 246 0 15 chr10 113910030 113910095 -26406670 - MER21B LTR ERV1 -795 68 5 980 171 15 15 chr10 113910921 113911120 -26405645 + MLT2C1 LTR ERVL 1 199 -198 497 224 179 0 chr10 113911222 113911401 -26405364 + MLT2C1 LTR ERVL 168 378 -19 36 40 0 0 chr10 113911413 113911463 -26405302 + AT_rich Low_complexity Low_complexity 1 50 0 237 91 0 0 chr10 113911465 113911498 -26405267 + MLT2C1 LTR ERVL 365 397 0 1985 133 3 0 chr10 113911910 113912195 -26404570 - AluSx SINE Alu -26 286 1 253 264 77 22 chr10 113913341 113913432 -26403333 + LTR50 LTR ERVL 472 567 -228 404 304 167 13 chr10 113913453 113913765 -26403000 + LTR50 LTR ERVL 428 787 -8 14335 108 7 5 chr10 113913765 113916790 -26399975 - L1PA8 LINE L1 -5 6167 3181 5707 116 4 19 chr10 113916940 113918219 -26398546 + L1PA14 LINE L1 4897 6161 0 522 335 5 0 chr10 113918457 113918654 -26398111 + L1MD1 LINE L1 106 303 -6237 623 267 22 4 chr10 113918654 113918879 -26397886 + L1MD1 LINE L1 4875 5103 -1437 621 236 12 85 chr10 113918881 113919046 -26397719 + FRAM SINE Alu 1 151 -25 847 261 25 33 chr10 113919149 113919543 -26397222 + L1MD1 LINE L1 5143 5533 -1007 228 254 0 15 chr10 113919599 113919666 -26397099 + MLT1F1 LTR MaLR 42 107 -460 1735 238 39 38 chr10 113919677 113919951 -26396814 + L1MC3 LINE L1 7203 7475 -310 1506 211 13 3 chr10 113919951 113920249 -26396516 + AluJb SINE Alu 5 305 -7 1735 238 39 38 chr10 113920249 113920532 -26396233 + L1MC3 LINE L1 7475 7761 -24 1985 176 7 56 chr10 113920568 113920703 -26396062 + L1MD1 LINE L1 5558 5698 -1043 2230 118 0 10 chr10 113920703 113920999 -26395766 + AluSc SINE Alu 1 293 -16 1985 176 7 56 chr10 113920999 113921429 -26395336 + L1MD1 LINE L1 5698 6098 -643 849 180 90 5 chr10 113921427 113921638 -26395127 + L1MD1 LINE L1 6402 6630 -6 * 1759 179 7 0 chr10 113921665 113921955 -26394810 - AluJb SINE Alu -20 292 1 485 356 46 40 chr10 113923748 113924074 -26392691 - L3 LINE CR1 -42 1535 1208 265 286 0 0 chr10 113924474 113924544 -26392221 - MIR SINE MIR -107 155 86 334 264 108 14 chr10 113924673 113924821 -26391944 + Charlie8 DNA MER1_type 88 249 -2168 261 0 0 0 chr10 113925409 113925438 -26391327 + (TG)n Simple_repeat Simple_repeat 2 30 0 220 330 23 11 chr10 113925905 113925993 -26390772 + MER5A DNA MER1_type 63 151 -38 357 218 38 83 chr10 113926119 113926252 -26390513 + L1MB7 LINE L1 6058 6184 0 289 148 0 0 chr10 113926775 113926829 -26389936 - L1MA4A LINE L1 -6 6297 6244 1751 207 34 11 chr10 113927113 113927470 -26389295 - MLT1A1 LTR MaLR 0 365 1 2249 100 3 7 chr10 113927507 113927807 -26388958 - AluY SINE Alu -12 299 1 351 0 0 0 chr10 113930135 113930174 -26386591 + (TG)n Simple_repeat Simple_repeat 2 40 0 280 338 44 44 chr10 113930382 113930542 -26386223 - MIR SINE MIR -95 167 8 321 26 0 0 chr10 113930676 113930714 -26386051 + (TA)n Simple_repeat Simple_repeat 2 39 0 185 0 40 0 chr10 113932013 113932038 -26384727 + (GTTTG)n Simple_repeat Simple_repeat 4 29 0 432 304 85 30 chr10 113932151 113932352 -26384413 - MIR SINE MIR -28 234 23 392 266 149 26 chr10 113933530 113933684 -26383081 + MIR SINE MIR 80 252 -10 1878 130 0 17 chr10 113935081 113935374 -26381391 - AluSx SINE Alu -2 310 23 258 232 43 0 chr10 113935381 113935450 -26381315 + CT-rich Low_complexity Low_complexity 3 74 0 25 31 0 0 chr10 113935682 113935714 -26381051 + AT_rich Low_complexity Low_complexity 1 32 0 182 37 37 0 chr10 113936359 113936386 -26380379 + (TTG)n Simple_repeat Simple_repeat 2 29 0 4861 171 20 11 chr10 113936763 113937153 -26379612 + L1MA7 LINE L1 5388 5773 -518 216 0 0 0 chr10 113937153 113937177 -26379588 + (CA)n Simple_repeat Simple_repeat 2 25 0 4861 171 20 11 chr10 113937177 113937682 -26379083 + L1MA7 LINE L1 5773 6291 0 192 152 0 0 chr10 113937724 113937757 -26379008 + (CA)n Simple_repeat Simple_repeat 2 34 0 635 295 86 25 chr10 113938244 113938685 -26378080 + L1MC4 LINE L1 7097 7564 -478 466 285 181 23 chr10 113938980 113939334 -26377431 + L2 LINE L2 2859 3268 -45 350 296 89 59 chr10 113941527 113941573 -26375192 + L1ME3A LINE L1 4383 4426 -1720 291 54 0 0 chr10 113941573 113941610 -26375155 + (TA)n Simple_repeat Simple_repeat 2 38 0 350 296 89 59 chr10 113941610 113942390 -26374375 + L1ME3A LINE L1 4426 5234 -912 365 113 32 0 chr10 113942394 113942456 -26374309 + MADE1 DNA Mariner 1 64 -16 639 275 147 44 chr10 113942464 113942574 -26374191 + L1ME3A LINE L1 5256 5353 -817 1931 160 0 13 chr10 113942574 113942887 -26373878 + AluJo SINE Alu 1 309 -3 639 275 147 44 chr10 113942887 113943595 -26373170 + L1ME3A LINE L1 5353 6169 -1 576 214 52 52 chr10 113943610 113943764 -26373001 + MIR SINE MIR 3 156 -106 204 215 31 15 chr10 113944307 113944372 -26372393 + A-rich Low_complexity Low_complexity 5 70 0 21 0 0 0 chr10 113944437 113944458 -26372307 + AT_rich Low_complexity Low_complexity 1 21 0 239 268 0 18 chr10 113944503 113944559 -26372206 + L2 LINE L2 3214 3268 -4 4046 206 38 23 chr10 113944721 113944953 -26371812 - L1MB3 LINE L1 -1 6418 6191 6377 127 29 17 chr10 113944953 113945948 -26370817 - LTR13 LTR ERVK 0 1007 1 4046 206 38 23 chr10 113945948 113946768 -26369997 - L1MB3 LINE L1 -228 6191 5166 1331 199 8 78 chr10 113946765 113947126 -26369639 - L1MB3 LINE L1 -5664 720 385 * 1012 192 66 0 chr10 113947171 113947369 -26369396 - L1MB3 LINE L1 -6156 228 18 207 297 0 16 chr10 113947507 113947571 -26369194 - MIR SINE MIR 0 262 200 417 164 14 14 chr10 113947576 113947649 -26369116 - Tigger5 DNA MER2_type -1 2322 2250 290 218 0 0 chr10 113947617 113947672 -26369093 - Tigger5 DNA MER2_type -2268 55 1 * 209 351 18 0 chr10 113947674 113947788 -26368977 - MIR SINE MIR -81 181 66 1314 186 37 68 chr10 113948110 113948432 -26368333 - AluJb SINE Alu 0 312 1 2130 115 0 0 chr10 113949021 113949309 -26367456 + AluSx SINE Alu 1 288 -24 493 94 90 0 chr10 113949311 113949556 -26367209 + (TA)n Simple_repeat Simple_repeat 1 267 0 357 271 10 0 chr10 113951554 113951650 -26365115 - MER103 DNA DNA -67 99 3 32 0 0 0 chr10 113952101 113952133 -26364632 + AT_rich Low_complexity Low_complexity 1 32 0 7817 225 59 41 chr10 113952502 113954340 -26362425 + L1MCa LINE L1 25 1828 -4598 1791 102 49 23 chr10 113954340 113954645 -26362120 + L1MA1 LINE L1 5983 6295 -7 7817 225 59 41 chr10 113954645 113955244 -26361521 + L1MCa LINE L1 1828 2415 -4011 1793 156 55 27 chr10 113955244 113955609 -26361156 + THE1C LTR MaLR 1 375 0 9332 126 35 43 chr10 113955609 113957202 -26359563 + THE1C-int LTR MaLR 1 1580 0 1570 163 78 28 chr10 113957202 113957559 -26359206 + THE1C LTR MaLR 1 375 0 7817 225 59 41 chr10 113957559 113958227 -26358538 + L1MCa LINE L1 2414 3183 -3243 1645 192 0 14 chr10 113958359 113958650 -26358115 - AluJb SINE Alu -25 287 1 345 94 0 0 chr10 113958651 113958704 -26358061 + L1MC1 LINE L1 6276 6328 -5 691 280 55 3 chr10 113959255 113959562 -26357203 - L1ME3A LINE L1 -302 5868 5546 369 198 0 0 chr10 113960368 113960449 -26356316 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 442 276 58 23 chr10 113960542 113960716 -26356049 - L1ME3A LINE L1 -17 6153 5974 381 22 0 0 chr10 113962224 113962270 -26354495 + (CA)n Simple_repeat Simple_repeat 2 47 0 335 314 99 21 chr10 113962919 113963110 -26353655 + L2 LINE L2 2552 2757 -557 1420 102 5 5 chr10 113963529 113963726 -26353039 + AluSc SINE Alu 27 223 -86 2595 277 59 1 chr10 113963729 113964881 -26351884 + L1M2 LINE L1 4302 5524 -680 354 66 26 53 chr10 113964881 113964957 -26351808 + (GGGAA)n Simple_repeat Simple_repeat 1 74 0 1459 263 96 33 chr10 113964958 113965593 -26351172 + L1ME1 LINE L1 5486 6160 -6 2952 173 19 25 chr10 113966402 113966974 -26349791 + MER52A LTR ERV1 1187 1755 0 2094 215 12 72 chr10 113967037 113967605 -26349160 + MER74A LTR ERVL 1 534 -24 382 377 82 0 chr10 113968799 113969006 -26347759 + MIR SINE MIR 21 244 -18 186 311 22 0 chr10 113969628 113969673 -26347092 + L2 LINE L2 3207 3252 -20 407 310 23 58 chr10 113970006 113970267 -26346498 + L1MCc LINE L1 19 270 -6153 253 336 74 34 chr10 113971282 113971431 -26345334 - L2 LINE L2 -563 2751 2597 268 320 120 8 chr10 113972685 113972810 -26343955 + MIR SINE MIR 8 146 -116 182 348 29 14 chr10 113972893 113972962 -26343803 - L2 LINE L2 -4 3268 3199 234 254 15 0 chr10 113972979 113973046 -26343719 + (CAT)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr10 113973052 113973073 -26343692 + AT_rich Low_complexity Low_complexity 1 21 0 273 338 78 7 chr10 113973250 113973404 -26343361 + LTR16A LTR ERVL 79 243 -207 876 296 57 25 chr10 113973938 113974344 -26342421 + HERV16 LTR ERVL 366 784 -4212 1262 153 0 35 chr10 113974453 113974681 -26342084 - AluJo SINE Alu -9 303 84 1173 367 45 6 chr10 113974939 113975598 -26341167 + HERV16 LTR ERVL 893 1577 -3419 526 275 116 40 chr10 113975643 113975919 -26340846 + HERV16 LTR ERVL 1688 1984 -3012 3925 85 6 0 chr10 113977396 113977926 -26338839 - L1PA8 LINE L1 -7 6165 5633 1285 210 17 52 chr10 113979085 113979258 -26337507 - AluJo SINE Alu -21 291 130 180 77 0 0 chr10 113979258 113979284 -26337481 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1285 210 17 52 chr10 113979284 113979401 -26337364 - AluJo SINE Alu -182 130 11 23 0 0 0 chr10 113979540 113979563 -26337202 + AT_rich Low_complexity Low_complexity 1 23 0 504 0 0 0 chr10 113979592 113979648 -26337117 + (TA)n Simple_repeat Simple_repeat 2 57 0 249 296 23 64 chr10 113980313 113980485 -26336280 + L3 LINE CR1 787 951 -626 265 308 31 17 chr10 113980569 113980728 -26336037 - MIR SINE MIR -32 230 1 180 0 0 0 chr10 113980785 113980805 -26335960 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 238 347 58 25 chr10 113981020 113981141 -26335624 + L3 LINE CR1 1340 1464 -113 189 388 41 18 chr10 113981896 113982066 -26334699 + L2 LINE L2 2497 2670 -644 1648 189 46 6 chr10 113982224 113982574 -26334191 + MLT1A1 LTR MaLR 1 364 -1 279 257 149 0 chr10 113984369 113984443 -26332322 + MLT1K LTR MaLR 81 165 -423 420 328 23 6 chr10 113984521 113984692 -26332073 + MLT1K LTR MaLR 269 442 -146 1810 214 36 38 chr10 113985668 113986200 -26330565 - L1MC3 LINE L1 -523 7262 6732 4850 45 0 0 chr10 113986206 113986788 -26329977 - L1PA3 LINE L1 -5 6150 5569 5273 27 12 3 chr10 113986788 113987791 -26328974 + L1P1 LINE L1 4718 5725 -430 2977 155 43 13 chr10 113987903 113988962 -26327803 - L1M2 LINE L1 -560 5740 4656 1140 203 76 73 chr10 113988969 113989378 -26327387 - MER66A LTR ERV1 -40 438 29 872 131 24 0 chr10 113989392 113989560 -26327205 - L1M2 LINE L1 -1488 4658 4487 717 302 117 58 chr10 113989648 113990145 -26326620 + MLT1K LTR MaLR 35 560 -28 6000 66 5 1 chr10 113990182 113990999 -26325766 - L1PA7 LINE L1 -11 6143 5324 960 166 51 11 chr10 113991112 113991287 -26325478 - AluJo SINE Alu -125 187 6 1085 188 5 5 chr10 113991292 113991516 -26325249 - MER95 LTR ERV -194 237 14 2568 68 9 3 chr10 113991531 113991869 -26324896 - L1PA7 LINE L1 -7 6147 5808 489 217 10 20 chr10 113992190 113992396 -26324369 + GA-rich Low_complexity Low_complexity 1 204 0 192 97 0 0 chr10 113992433 113992464 -26324301 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 750 300 88 4 chr10 113992828 113993055 -26323710 - MIR SINE MIR -10 252 7 353 281 88 47 chr10 113993056 113993227 -26323538 + MER5B DNA MER1_type 1 178 0 252 183 43 21 chr10 113993235 113993328 -26323437 - MER113 DNA MER1_type? -86 435 341 205 273 0 0 chr10 113993757 113993801 -26322964 + polypurine Low_complexity Low_complexity 2 45 0 1864 123 3 32 chr10 113995470 113995755 -26321010 - AluSc SINE Alu -4 305 29 464 263 92 13 chr10 113996168 113996320 -26320445 + MIR SINE MIR 21 184 -78 438 98 0 0 chr10 113997114 113997175 -26319590 + Alu SINE Alu 235 295 -15 24 0 0 0 chr10 113998312 113998336 -26318429 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 113998380 113998410 -26318355 + AT_rich Low_complexity Low_complexity 1 30 0 375 291 184 6 chr10 113998977 113999156 -26317609 + MIR SINE MIR 39 249 -13 2392 99 0 6 chr10 113999232 113999546 -26317219 + AluSx SINE Alu 1 312 0 466 212 118 82 chr10 113999717 113999815 -26316950 + MIR SINE MIR 57 165 -97 207 0 0 0 chr10 113999815 113999838 -26316927 + (TG)n Simple_repeat Simple_repeat 2 24 0 466 212 118 82 chr10 113999838 113999909 -26316856 + MIR SINE MIR 165 232 -30 2037 148 138 5 chr10 114001237 114001614 -26315151 - MSTA LTR MaLR 0 428 2 7193 180 24 73 chr10 114001615 114001791 -26314974 - MSTA-int LTR MaLR 0 1651 1468 2130 125 6 26 chr10 114001791 114002104 -26314661 + AluSg SINE Alu 1 307 -3 7193 180 24 73 chr10 114002104 114002755 -26314010 - MSTA-int LTR MaLR -183 1468 787 10163 117 41 1 chr10 114002755 114004274 -26312491 + THE1B-int LTR MaLR 1 1580 0 2127 150 33 25 chr10 114004274 114004635 -26312130 + THE1B LTR MaLR 1 364 0 7193 180 24 73 chr10 114004635 114005537 -26311228 - MSTA-int LTR MaLR -862 789 5 1752 166 152 0 chr10 114005537 114005905 -26310860 - MSTA LTR MaLR -4 424 1 936 176 40 105 chr10 114006158 114006481 -26310284 - MLT1B LTR MaLR -86 304 3 436 307 37 45 chr10 114006494 114006738 -26310027 + LTR16A1 LTR ERVL 51 292 -165 414 264 28 7 chr10 114007056 114007200 -26309565 + (TA)n Simple_repeat Simple_repeat 1 147 0 21 36 0 0 chr10 114007206 114007234 -26309531 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr10 114007294 114007327 -26309438 + AT_rich Low_complexity Low_complexity 1 33 0 718 297 103 11 chr10 114007621 114007971 -26308794 + L1MDa LINE L1 13 394 -6146 1018 219 20 23 chr10 114008666 114008968 -26307797 + L1MDa LINE L1 1039 1339 -5204 328 162 73 0 chr10 114010238 114010306 -26306459 - MSTA LTR MaLR -355 73 1 3781 262 31 22 chr10 114010312 114012124 -26304641 + L1 LINE L1 2060 3849 -2691 7338 45 0 8 chr10 114012133 114013513 -26303252 - L1PA4 LINE L1 -3 6152 4778 14403 39 4 1 chr10 114013514 114015386 -26301379 + L1P LINE L1 2939 4815 -1331 7093 203 40 22 chr10 114015361 114017920 -26298845 + L1PA16 LINE L1 3441 6044 -122 * 1836 154 17 40 chr10 114017931 114018281 -26298484 + LTR3b LTR ERVK 158 499 -1 756 132 0 0 chr10 114018715 114018821 -26297944 - AluSq/x SINE Alu -207 106 1 5738 152 46 2 chr10 114018822 114020277 -26296488 - L1P4 LINE L1 -487 5687 4167 3157 187 11 3 chr10 114020273 114020914 -26295851 + L1P4 LINE L1 3518 4163 -1983 * 250 286 25 25 chr10 114021143 114021262 -26295503 + L1MC/D LINE L1 5763 5881 -1927 3948 123 8 13 chr10 114023118 114023727 -26293038 + LTR9 LTR ERV1 7 612 0 19616 134 18 48 chr10 114023742 114027269 -26289496 + HUERS-P3 LTR ERV1 15 3435 -5484 2819 157 14 6 chr10 114027246 114027738 -26289027 + HUERS-P3 LTR ERV1 8424 8919 0 * 4205 122 12 7 chr10 114027740 114028346 -26288419 + LTR9 LTR ERV1 4 612 0 536 317 48 5 chr10 114031025 114031233 -26285532 - LTR16B LTR ERVL -239 225 9 264 386 23 15 chr10 114032872 114033004 -26283761 - L2 LINE L2 0 3272 3140 719 256 127 14 chr10 114033142 114033646 -26283119 + L1MC5 LINE L1 7317 7877 -84 495 341 140 26 chr10 114033791 114034063 -26282702 - L2 LINE L2 -556 2758 2518 18701 50 9 1 chr10 114034063 114037239 -26279526 - L1PA5 LINE L1 -5 6149 2963 495 341 140 26 chr10 114037239 114037458 -26279307 - L2 LINE L2 -796 2518 2211 2029 164 59 17 chr10 114037556 114037965 -26278800 - MSTB1 LTR MaLR -5 427 2 769 305 69 46 chr10 114038705 114039231 -26277534 + L1M4 LINE L1 728 1390 -4982 301 314 74 32 chr10 114039367 114039864 -26276901 + L1M4 LINE L1 3709 4226 -2156 391 239 22 0 chr10 114040958 114041050 -26275715 + L2 LINE L2 2614 2707 -607 22 0 0 0 chr10 114041497 114041519 -26275246 + AT_rich Low_complexity Low_complexity 1 22 0 225 213 49 16 chr10 114042552 114042613 -26274152 - MER5B DNA MER1_type -92 86 24 37 62 0 0 chr10 114043062 114043127 -26273638 + AT_rich Low_complexity Low_complexity 1 65 0 413 368 18 31 chr10 114043723 114043946 -26272819 + MIR SINE MIR 43 262 0 2370 94 0 0 chr10 114044226 114044525 -26272240 - AluSq SINE Alu -14 299 1 320 278 120 42 chr10 114046605 114046796 -26269969 + MLT1J2 LTR MaLR 2 207 -243 2706 166 49 5 chr10 114046816 114047384 -26269381 + L1MA4 LINE L1 5686 6278 -22 231 260 15 117 chr10 114047466 114047557 -26269208 + MLT1J2 LTR MaLR 261 323 -127 1502 168 46 21 chr10 114047557 114047842 -26268923 - AluSx SINE Alu -20 292 1 231 260 15 117 chr10 114047842 114047946 -26268819 + MLT1J2 LTR MaLR 323 436 -14 3227 203 92 31 chr10 114048224 114049021 -26267744 - MER21B LTR ERV1 -18 845 1 267 360 48 58 chr10 114049196 114049385 -26267380 + L3 LINE CR1 1318 1504 -73 187 310 186 0 chr10 114050931 114051044 -26265721 + MIR SINE MIR 66 199 -63 668 167 48 24 chr10 114051390 114051516 -26265249 - FLAM_C SINE Alu -14 129 1 1584 216 27 84 chr10 114051518 114051621 -26265144 + MSTB2 LTR MaLR 1 108 -349 2121 205 22 74 chr10 114051621 114052202 -26264563 - MLT2B3 LTR ERVL -3 551 1 1584 216 27 84 chr10 114052202 114052583 -26264182 + MSTB2 LTR MaLR 108 457 0 1512 275 27 25 chr10 114052585 114052764 -26264001 + MLT1J2-int LTR MaLR 2 179 -1556 2322 187 24 9 chr10 114052764 114053218 -26263547 - LOR1b LTR ERV1 0 461 1 1512 275 27 25 chr10 114053218 114053630 -26263135 + MLT1J2-int LTR MaLR 179 594 -1141 345 42 0 84 chr10 114053730 114053801 -26262964 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 319 229 140 67 chr10 114053977 114054156 -26262609 + HERVK3 LTR ERVK 81 272 -6971 418 261 0 0 chr10 114054217 114054309 -26262456 + HERVK3 LTR ERVK 589 680 -6563 * 4308 180 31 23 chr10 114054297 114055711 -26261054 + HERVK3 LTR ERVK 1321 5579 -366 1264 148 18 9 chr10 114055705 114055741 -26261024 + PRIMA41-int LTR ERV1 7538 7756 0 * 1353 77 22 0 chr10 114055741 114055922 -26260843 + HERVK3 LTR ERVK 5575 5759 -186 327 199 0 18 chr10 114055922 114055997 -26260768 + MER41C LTR ERV1 1 61 -493 423 56 0 0 chr10 114055997 114056051 -26260714 + HERVK14 LTR ERVK 5835 5888 -57 2032 113 20 51 chr10 114056056 114056410 -26260355 + LTR3b LTR ERVK 158 500 0 475 250 0 0 chr10 114056410 114056518 -26260247 + L1PA16 LINE L1 6039 6146 -20 1443 266 116 19 chr10 114056595 114057449 -26259316 + L1MDa LINE L1 1358 2294 -4246 277 254 39 39 chr10 114057662 114057792 -26258973 + L1ME1 LINE L1 6024 6153 -13 11743 220 58 21 chr10 114058010 114058534 -26258231 - L1PA15 LINE L1 0 7603 7100 2414 77 0 0 chr10 114058534 114058845 -26257920 - AluY SINE Alu 0 311 1 11743 220 58 21 chr10 114058845 114060717 -26256048 - L1PA15 LINE L1 -503 7100 5298 1870 164 19 24 chr10 114060717 114061094 -26255671 + THE1C LTR MaLR 1 375 0 11743 220 58 21 chr10 114061094 114062404 -26254361 - L1PA15 LINE L1 -2305 5298 4037 2244 175 41 2 chr10 114062404 114062816 -26253949 - MSTA LTR MaLR 0 428 1 11743 220 58 21 chr10 114062816 114063287 -26253478 - L1PA15 LINE L1 -3566 4037 3585 2320 110 0 19 chr10 114063287 114063605 -26253160 - AluSx SINE Alu 0 312 1 11743 220 58 21 chr10 114063605 114064048 -26252717 - L1PA15 LINE L1 -4018 3585 2801 481 295 57 33 chr10 114064421 114064787 -26251978 - L1PA15 LINE L1 -7200 381 7 204 245 19 0 chr10 114068118 114068171 -26248594 - MIR SINE MIR -70 192 139 193 313 125 0 chr10 114069724 114069804 -26246961 - MIR3 SINE MIR -4 204 115 241 349 58 29 chr10 114070252 114070414 -26246351 - MIR3 SINE MIR -65 143 15 293 279 126 38 chr10 114070601 114070784 -26245981 - MIR SINE MIR -56 206 8 2472 71 0 0 chr10 114073859 114074169 -26242596 + AluY SINE Alu 1 310 -1 563 294 6 18 chr10 114074629 114074792 -26241973 + MIR SINE MIR 73 233 -29 227 328 15 0 chr10 114074844 114074911 -26241854 - L2 LINE L2 -1 3312 3245 189 365 0 32 chr10 114075799 114075862 -26240903 + L2 LINE L2 3191 3251 -21 268 293 86 57 chr10 114076221 114076265 -26240500 + MIR SINE MIR 30 71 -191 2367 144 6 0 chr10 114076265 114076626 -26240139 - THE1B LTR MaLR -1 363 1 268 293 86 57 chr10 114076626 114076721 -26240044 + MIR SINE MIR 71 173 -89 600 295 71 5 chr10 114078440 114078650 -26238115 - MIR SINE MIR -26 236 13 379 335 131 10 chr10 114079938 114080144 -26236621 - MIR SINE MIR -27 235 5 272 146 36 0 chr10 114080631 114080686 -26236079 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 358 235 19 116 chr10 114080808 114080860 -26235905 - MIR SINE MIR -64 198 143 2169 189 54 40 chr10 114080860 114081363 -26235402 + MER67D LTR ERV1 1 510 -4 358 235 19 116 chr10 114081363 114081502 -26235263 - MIR SINE MIR -119 143 17 3007 167 80 36 chr10 114081575 114082235 -26234530 + LTR8 LTR ERV1 3 691 0 312 70 0 0 chr10 114082305 114082348 -26234417 + (TG)n Simple_repeat Simple_repeat 1 43 0 412 352 98 0 chr10 114083304 114083497 -26233268 + MIR SINE MIR 49 260 -2 388 179 13 0 chr10 114083794 114083872 -26232893 + MADE1 DNA Mariner 2 80 0 24 0 0 0 chr10 114083937 114083961 -26232804 + AT_rich Low_complexity Low_complexity 1 24 0 188 200 114 29 chr10 114084209 114084279 -26232486 + L2 LINE L2 2678 2753 -561 385 293 43 38 chr10 114084991 114085156 -26231609 + MIR SINE MIR 12 174 -62 227 371 180 0 chr10 114085244 114085333 -26231432 - MER91A DNA MER1_type -90 106 2 1399 175 3 62 chr10 114087493 114087784 -26228981 - AluJo SINE Alu -3 309 36 355 313 37 12 chr10 114088040 114088203 -26228562 + MIR SINE MIR 37 203 -59 328 166 43 22 chr10 114088446 114088538 -26228227 - L1MC3 LINE L1 -1 7994 7705 494 235 292 8 chr10 114088629 114088863 -26227902 + MLT1F1 LTR MaLR 176 460 -107 435 351 21 11 chr10 114088950 114089138 -26227627 + MIR SINE MIR 14 203 -59 425 171 68 0 chr10 114089202 114089290 -26227475 + MLT1F LTR MaLR 449 542 0 216 287 92 0 chr10 114089326 114089413 -26227352 - L2 LINE L2 -22 3291 3197 265 319 44 22 chr10 114090820 114090961 -26225804 - MIR SINE MIR -63 145 19 2030 115 55 33 chr10 114091829 114092195 -26224570 + THE1C LTR MaLR 1 374 -1 276 280 64 76 chr10 114092216 114092373 -26224392 - MER5A DNA MER1_type -28 161 7 246 308 0 0 chr10 114093090 114093155 -26223610 + MIR SINE MIR 18 82 -180 244 277 125 33 chr10 114093588 114093741 -26223024 - MIR SINE MIR -55 153 23 23 54 0 0 chr10 114094706 114094743 -26222022 + AT_rich Low_complexity Low_complexity 1 37 0 380 313 96 5 chr10 114094791 114094999 -26221766 + L1MEc LINE L1 48 274 -6122 365 275 74 32 chr10 114095442 114095726 -26221039 + L1MEc LINE L1 684 979 -5226 816 293 105 18 chr10 114095787 114096538 -26220227 - L1MEc LINE L1 -3478 2602 1838 3878 181 53 48 chr10 114096791 114097646 -26219119 - MER21B LTR ERV1 -4 859 1 331 262 174 34 chr10 114097788 114097937 -26218828 - L1MEc LINE L1 -4695 1385 1216 1305 283 98 44 chr10 114098015 114098915 -26217850 - L1MEc LINE L1 -4981 1089 142 4812 102 7 42 chr10 114098948 114099704 -26217061 - L1PA10 LINE L1 -1 6167 5439 1796 152 44 0 chr10 114100347 114100528 -26216237 - AluSg SINE Alu 0 310 110 237 33 0 0 chr10 114100528 114100558 -26216207 + (TA)n Simple_repeat Simple_repeat 1 30 0 1796 152 44 0 chr10 114100558 114100673 -26216092 - AluSg SINE Alu -200 110 1 220 299 0 15 chr10 114101236 114101303 -26215462 - MIR SINE MIR -60 148 83 22 70 0 0 chr10 114102320 114102363 -26214402 + AT_rich Low_complexity Low_complexity 1 43 0 1395 177 122 25 chr10 114102551 114102913 -26213852 - MLT2C1 LTR ERVL 0 397 1 344 206 53 61 chr10 114103170 114103301 -26213464 - MLT1I LTR MaLR -205 204 75 650 313 49 0 chr10 114103741 114103965 -26212800 - MIR SINE MIR -1 261 27 301 349 81 41 chr10 114104112 114104547 -26212218 + L2 LINE L2 2259 2710 -604 1604 197 77 3 chr10 114104743 114105083 -26211682 + MLT1A1 LTR MaLR 1 365 0 360 342 45 15 chr10 114106218 114106417 -26210348 + MIR SINE MIR 5 209 -53 217 152 0 0 chr10 114106525 114106558 -26210207 + MIR SINE MIR 219 251 -11 599 76 0 0 chr10 114106561 114106640 -26210125 + L1P4 LINE L1 5600 5678 -496 5114 112 20 3 chr10 114107113 114107966 -26208799 + L1PA12 LINE L1 5157 6027 -141 3726 131 0 2 chr10 114108124 114108704 -26208061 + L1PA13 LINE L1 5581 6159 -4 322 240 40 40 chr10 114108760 114108860 -26207905 + L2 LINE L2 3214 3313 0 204 304 14 0 chr10 114108866 114108935 -26207830 + MIR SINE MIR 131 200 -62 470 300 113 13 chr10 114110247 114110627 -26206138 - L1ME4a LINE L1 -12 6109 5692 429 274 34 16 chr10 114110699 114110924 -26205841 + MLT1G1 LTR MaLR 20 254 -336 215 225 42 14 chr10 114110951 114111022 -26205743 + GA-rich Low_complexity Low_complexity 4 76 0 241 237 17 17 chr10 114111060 114111119 -26205646 + MLT1G1 LTR MaLR 339 397 -193 242 253 53 13 chr10 114111257 114111332 -26205433 + MLT1A1-int LTR MaLR 17 94 -1277 1450 219 14 4 chr10 114111706 114111984 -26204781 + AluJo SINE Alu 5 285 -27 254 259 35 70 chr10 114112827 114112970 -26203795 + MLT1A1-int LTR MaLR 1220 1357 -14 419 319 145 4 chr10 114113003 114113235 -26203530 + MLT1H1 LTR MaLR 3 265 -290 293 217 113 61 chr10 114113383 114113498 -26203267 + MLT1G1 LTR MaLR 429 576 0 180 246 18 35 chr10 114113750 114113807 -26202958 - L2 LINE L2 0 3272 3217 572 284 42 23 chr10 114114006 114114221 -26202544 - MIR SINE MIR -10 252 34 188 296 0 0 chr10 114114250 114114304 -26202461 + MIR SINE MIR 104 157 -105 2344 127 14 0 chr10 114114680 114115043 -26201722 + L1PA13 LINE L1 5791 6158 -5 26 0 0 0 chr10 114117060 114117086 -26199679 + AT_rich Low_complexity Low_complexity 1 26 0 919 234 100 97 chr10 114117188 114117736 -26199029 - LTR50 LTR ERVL -35 760 211 401 344 87 14 chr10 114117929 114118217 -26198548 + L2 LINE L2 2999 3307 -6 260 353 21 21 chr10 114118874 114119115 -26197650 - L1ME3A LINE L1 -239 5931 5691 1097 206 38 2 chr10 114119336 114119617 -26197148 + MER2 DNA MER2_type 4 344 -1 240 122 0 0 chr10 114119625 114119666 -26197099 + (TA)n Simple_repeat Simple_repeat 2 42 0 344 332 94 13 chr10 114119696 114119931 -26196834 - L1ME3A LINE L1 -559 5605 5352 208 53 53 0 chr10 114120887 114120925 -26195840 + (TA)n Simple_repeat Simple_repeat 1 40 0 404 156 29 23 chr10 114120947 114121120 -26195645 + (TA)n Simple_repeat Simple_repeat 2 175 0 44 46 0 0 chr10 114121120 114121185 -26195580 + AT_rich Low_complexity Low_complexity 1 65 0 268 323 0 15 chr10 114121493 114121626 -26195139 + (CATA)n Simple_repeat Simple_repeat 2 132 0 21 36 0 0 chr10 114122104 114122132 -26194633 + AT_rich Low_complexity Low_complexity 1 28 0 246 200 10 90 chr10 114122201 114122301 -26194464 - MIR SINE MIR -51 211 120 33 25 0 0 chr10 114122901 114122941 -26193824 + AT_rich Low_complexity Low_complexity 1 40 0 321 295 0 13 chr10 114122948 114123026 -26193739 - MER5B DNA MER1_type -98 80 4 2407 105 24 16 chr10 114123542 114123914 -26192851 + THE1C LTR MaLR 1 375 0 290 337 47 23 chr10 114124535 114124707 -26192058 - MIR SINE MIR -70 192 17 2144 147 0 0 chr10 114124937 114125249 -26191516 + AluSx SINE Alu 1 312 0 5093 86 17 12 chr10 114125893 114126618 -26190147 + L1PA11 LINE L1 5439 6166 -8 357 24 0 0 chr10 114126738 114126780 -26189985 + (TG)n Simple_repeat Simple_repeat 1 42 0 836 128 0 0 chr10 114127042 114127159 -26189606 + AluSg SINE Alu 1 117 -193 762 11 0 0 chr10 114127159 114127246 -26189519 + (TA)n Simple_repeat Simple_repeat 1 87 0 21 36 0 0 chr10 114127658 114127686 -26189079 + AT_rich Low_complexity Low_complexity 1 28 0 1332 196 7 44 chr10 114127700 114127971 -26188794 + AluJo SINE Alu 11 271 -41 567 46 35 0 chr10 114127977 114128064 -26188701 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 953 223 52 9 chr10 114128119 114128348 -26188417 + MLT1D LTR MaLR 3 241 -264 26 0 0 0 chr10 114129035 114129061 -26187704 + AT_rich Low_complexity Low_complexity 1 26 0 271 386 23 15 chr10 114131992 114132124 -26184641 - L2 LINE L2 0 3272 3140 585 256 72 38 chr10 114132198 114132491 -26184274 + L1MC5 LINE L1 7253 7555 -406 396 284 76 5 chr10 114132556 114132767 -26183998 + L1MC5 LINE L1 7652 7877 -84 294 348 169 11 chr10 114132877 114133061 -26183704 - L2 LINE L2 -512 2802 2590 7071 57 9 0 chr10 114133184 114134262 -26182503 - L1PA5 LINE L1 -5 6149 5078 1988 135 13 26 chr10 114134262 114134574 -26182191 + MER1A DNA MER1_type 87 394 -135 277 226 0 0 chr10 114135554 114135607 -26181158 + AluJ/monomer SINE Alu 1 53 -247 491 261 196 39 chr10 114135815 114136278 -26180487 - L1M4 LINE L1 -2623 3523 2988 * 1596 228 16 9 chr10 114136238 114136667 -26180098 + L1 LINE L1 4080 4511 -1635 27372 99 10 15 chr10 114136669 114141623 -26175142 + L1PA7 LINE L1 1158 6104 -50 205 344 22 11 chr10 114142774 114142864 -26173901 - MIR SINE MIR -68 140 50 1551 126 0 0 chr10 114143394 114143633 -26173132 + L1PA13 LINE L1 5925 6163 0 927 242 72 56 chr10 114144222 114144581 -26172184 - MLT1A1 LTR MaLR 0 365 1 7047 114 31 3 chr10 114145079 114146223 -26170542 - L1PBa LINE L1 -4200 2663 1488 1554 247 48 2 chr10 114146230 114146643 -26170122 - L1PBa LINE L1 -6426 437 6 406 321 31 58 chr10 114147641 114147865 -26168900 + MIR SINE MIR 36 253 -9 185 343 111 6 chr10 114147900 114148081 -26168684 - L2 LINE L2 -2 3311 3112 604 371 34 8 chr10 114148234 114148559 -26168206 - L2 LINE L2 -268 3004 2674 228 311 40 0 chr10 114148589 114148663 -26168102 - MIR SINE MIR -184 78 2 1513 142 48 9 chr10 114149755 114150105 -26166660 - LTR54B LTR ERV1 -2 496 3 256 328 15 30 chr10 114150269 114150403 -26166362 - L2 LINE L2 -630 2684 2553 282 29 0 0 chr10 114150415 114150450 -26166315 + (GA)n Simple_repeat Simple_repeat 2 36 0 269 192 28 11 chr10 114150450 114150627 -26166138 + (TA)n Simple_repeat Simple_repeat 1 180 0 29 0 0 0 chr10 114150649 114150678 -26166087 + AT_rich Low_complexity Low_complexity 1 29 0 777 283 103 25 chr10 114151845 114152361 -26164404 - MLT1G1 LTR MaLR -5 590 1 186 43 0 0 chr10 114154806 114154829 -26161936 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1887 213 21 19 chr10 114155450 114155600 -26161165 - L1MD3 LINE L1 -10 7985 7837 1999 186 44 16 chr10 114155600 114156031 -26160734 - MER65A LTR ERV1 0 445 3 1887 213 21 19 chr10 114156031 114156312 -26160453 - L1MD3 LINE L1 -158 7837 7553 * 2830 210 52 8 chr10 114156299 114156948 -26159817 - L1MC3 LINE L1 -1 7784 7107 1233 235 27 9 chr10 114156971 114157299 -26159466 - L1MC4a LINE L1 -1258 6550 6217 216 347 16 57 chr10 114157851 114157975 -26158790 + MIR3 SINE MIR 6 124 -84 342 284 0 37 chr10 114159146 114159255 -26157510 - MER5B DNA MER1_type -1 177 73 451 254 99 14 chr10 114160314 114160456 -26156309 - L2 LINE L2 0 3313 3160 838 194 121 34 chr10 114161132 114161338 -26155427 - MER58A DNA MER1_type 0 224 1 298 306 18 52 chr10 114161345 114161513 -26155252 + MIR SINE MIR 20 186 -76 2147 128 0 3 chr10 114161556 114161854 -26154911 - AluSx SINE Alu -15 297 1 233 333 114 9 chr10 114164837 114164942 -26151823 - L2 LINE L2 -20 3252 3137 291 251 337 11 chr10 114165139 114165326 -26151439 - MIR SINE MIR 0 262 15 192 344 26 97 chr10 114165398 114165709 -26151056 - L2 LINE L2 -430 2884 2596 917 239 7 73 chr10 114165711 114166000 -26150765 + L1M4b LINE L1 1 270 -6589 * 1217 113 9 14 chr10 114165998 114166211 -26150554 - L1P4 LINE L1 -697 5469 5258 2324 96 0 0 chr10 114167755 114168047 -26148718 - AluSc SINE Alu -8 301 10 386 317 49 49 chr10 114168389 114168594 -26148171 - L1ME LINE L1 -353 5768 5564 210 154 0 0 chr10 114168670 114168709 -26148056 + A-rich Low_complexity Low_complexity 1 39 0 1659 177 133 21 chr10 114169089 114169474 -26147291 - MSTA LTR MaLR 0 428 1 244 284 21 21 chr10 114169551 114169646 -26147119 + CT-rich Low_complexity Low_complexity 4 98 0 545 332 14 5 chr10 114170866 114171080 -26145685 + MLT2E LTR ERVL 413 628 0 1995 138 3 0 chr10 114171160 114171456 -26145309 + AluSx SINE Alu 1 297 -15 220 380 39 39 chr10 114171464 114171593 -26145172 - MIR3 SINE MIR -25 183 55 234 0 0 0 chr10 114171984 114172010 -26144755 + (TG)n Simple_repeat Simple_repeat 1 26 0 237 280 13 0 chr10 114172017 114172092 -26144673 + C-rich Low_complexity Low_complexity 2 77 0 326 305 0 15 chr10 114172098 114172229 -26144536 + CT-rich Low_complexity Low_complexity 2 130 0 480 228 67 47 chr10 114172814 114173007 -26143758 + MER97c DNA MER1_type? 894 1090 0 21 0 0 0 chr10 114173851 114173872 -26142893 + AT_rich Low_complexity Low_complexity 1 21 0 261 293 63 58 chr10 114173877 114174068 -26142697 - MLT1L LTR MaLR -2 613 422 239 186 68 0 chr10 114174172 114174231 -26142534 - MLT1L LTR MaLR -348 267 205 239 176 20 0 chr10 114174569 114174620 -26142145 - MER103 DNA DNA -56 110 59 31 0 0 0 chr10 114174665 114174696 -26142069 + AT_rich Low_complexity Low_complexity 1 31 0 2114 214 23 71 chr10 114175908 114176483 -26140282 - MLT2B3 LTR ERVL -7 547 1 5376 115 9 4 chr10 114176485 114177834 -26138931 - HERVL-B3 LTR ERVL -2 5652 4254 1499 190 11 4 chr10 114177837 114178116 -26138649 - HERVL-B3 LTR ERVL -1915 3739 3459 7187 142 4 6 chr10 114178224 114179342 -26137423 - HERVL LTR ERVL -3563 2091 977 321 322 40 40 chr10 114179687 114179861 -26136904 + MIR SINE MIR 40 213 -49 432 99 0 0 chr10 114179976 114180047 -26136718 + (TC)n Simple_repeat Simple_repeat 1 71 0 434 193 80 0 chr10 114180085 114180173 -26136592 - MLT1I LTR MaLR -12 397 303 3608 153 75 7 chr10 114180517 114181210 -26135555 + Tigger3(Golem) DNA MER2_type 2287 3026 -3 247 320 10 0 chr10 114181325 114181425 -26135340 + L1M2 LINE L1 5339 5439 -858 269 279 12 23 chr10 114181458 114181544 -26135221 + GA-rich Low_complexity Low_complexity 6 90 0 346 219 38 8 chr10 114181550 114181646 -26135119 + L1ME3A LINE L1 5482 5576 -588 284 311 17 50 chr10 114181847 114181966 -26134799 + MLT1H LTR MaLR 238 352 -197 626 222 47 97 chr10 114182127 114182406 -26134359 + L1ME3A LINE L1 5573 5837 -333 299 281 6 81 chr10 114182448 114182608 -26134157 + L1ME3A LINE L1 5951 6098 -72 264 297 109 55 chr10 114183154 114183319 -26133446 + MIR SINE MIR 20 193 -69 677 149 13 191 chr10 114183469 114183704 -26133061 - 7SK RNA RNA 0 193 1 317 65 19 74 chr10 114183804 114183912 -26132853 + (TA)n Simple_repeat Simple_repeat 2 103 0 272 188 16 0 chr10 114183959 114184023 -26132742 + (TA)n Simple_repeat Simple_repeat 1 65 0 223 342 53 9 chr10 114184696 114184810 -26131955 + L2 LINE L2 3187 3305 -8 462 320 72 25 chr10 114185132 114185532 -26131233 - L1ME3A LINE L1 -208 5962 5544 198 374 87 0 chr10 114185595 114185710 -26131055 - MIR3 SINE MIR -42 166 42 354 200 62 0 chr10 114186244 114186309 -26130456 + L2 LINE L2 3204 3272 0 1245 226 42 14 chr10 114186715 114186880 -26129885 - AluJo SINE Alu -16 296 118 425 19 19 0 chr10 114186880 114186934 -26129831 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1245 226 42 14 chr10 114186934 114187056 -26129709 - AluJo SINE Alu -194 118 1 358 259 35 77 chr10 114187271 114187441 -26129324 + L1MEc LINE L1 1445 1607 -4789 243 341 8 53 chr10 114187482 114187614 -26129151 - L2 LINE L2 -264 3049 2924 2256 123 31 17 chr10 114187659 114188018 -26128747 + THE1B LTR MaLR 1 364 0 268 356 59 0 chr10 114189710 114189828 -26126937 - MIR SINE MIR -26 236 112 8751 209 43 39 chr10 114189906 114192314 -26124451 + Cheshire DNA MER1_type 2 2419 -1 206 319 90 43 chr10 114192822 114193010 -26123755 - L2 LINE L2 -352 2962 2766 640 150 8 8 chr10 114193010 114193137 -26123628 + L1MB3 LINE L1 5773 5899 -284 2040 134 3 0 chr10 114193898 114194181 -26122584 + AluSx SINE Alu 1 284 -28 29 0 0 0 chr10 114194185 114194214 -26122551 + AT_rich Low_complexity Low_complexity 1 29 0 207 281 0 18 chr10 114194485 114194542 -26122223 - L2 LINE L2 -4 3309 3254 276 77 0 0 chr10 114194955 114194994 -26121771 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 205 128 26 chr10 114195913 114195991 -26120774 + MIR SINE MIR 177 262 0 205 314 20 0 chr10 114196157 114196208 -26120557 + MER5A DNA MER1_type 137 188 -1 575 297 73 39 chr10 114196245 114196531 -26120234 - L3 LINE CR1 -75 1502 1207 2008 134 0 0 chr10 114196634 114196942 -26119823 - AluSx SINE Alu 0 314 7 251 305 133 13 chr10 114196966 114197117 -26119648 + Charlie8 DNA MER1_type 85 253 -2164 509 354 60 25 chr10 114197552 114197919 -26118846 + MLT1K LTR MaLR 117 496 -92 200 337 169 0 chr10 114198934 114199017 -26117748 + MIR SINE MIR 48 144 -118 29 47 0 0 chr10 114199981 114200024 -26116741 + AT_rich Low_complexity Low_complexity 1 43 0 752 199 56 161 chr10 114200024 114200291 -26116474 - MER8 DNA MER2_type 0 239 1 332 47 0 0 chr10 114200506 114200549 -26116216 + U5 snRNA snRNA 2 44 -72 2180 86 0 0 chr10 114200707 114201001 -26115764 + AluY SINE Alu 15 308 0 214 300 163 12 chr10 114202021 114202181 -26114584 - MIR SINE MIR -78 184 1 306 331 25 26 chr10 114203925 114204062 -26112703 - MIR SINE MIR -66 142 22 2054 163 32 70 chr10 114204998 114205249 -26111516 - MSTA LTR MaLR 0 428 200 3186 26 0 8 chr10 114205249 114205631 -26111134 + L1PA3 LINE L1 5776 6154 -1 2054 163 32 70 chr10 114205631 114205821 -26110944 - MSTA LTR MaLR -228 200 4 285 75 0 0 chr10 114205969 114206009 -26110756 + (TG)n Simple_repeat Simple_repeat 2 41 0 221 257 243 0 chr10 114206616 114206690 -26110075 - L2 LINE L2 -18 3254 3163 396 293 65 0 chr10 114206849 114206972 -26109793 - MIR SINE MIR -97 165 35 205 200 0 0 chr10 114208594 114208629 -26108136 + L2 LINE L2 3222 3256 -16 297 360 56 11 chr10 114208805 114208983 -26107782 - MER117 DNA MER1_type -6 191 6 9301 136 50 7 chr10 114210383 114211897 -26104868 + THE1B-int LTR MaLR 1 1580 0 2436 129 3 0 chr10 114211897 114212260 -26104505 + THE1B LTR MaLR 1 364 0 1747 152 0 0 chr10 114212583 114212847 -26103918 - AluSx SINE Alu -8 304 41 240 380 9 9 chr10 114212958 114213071 -26103694 - MIR SINE MIR -122 140 28 10201 86 6 21 chr10 114213945 114216115 -26100650 + L1PA7 LINE L1 3916 6064 -90 205 268 190 21 chr10 114216665 114216807 -26099958 - MIR SINE MIR 0 262 97 326 300 167 0 chr10 114217292 114217442 -26099323 + MER5A DNA MER1_type 4 178 -11 2287 147 8 11 chr10 114219450 114219824 -26096941 - Tigger2 DNA MER2_type 0 2718 2346 2853 223 18 7 chr10 114220012 114220723 -26096042 - L1P LINE L1 -910 5236 4514 1822 95 8 4 chr10 114220723 114220996 -26095769 - AluY SINE Alu 0 310 37 2853 223 18 7 chr10 114220996 114221011 -26095754 - L1P LINE L1 -1632 4514 4501 1901 130 58 3 chr10 114221015 114221307 -26095458 - AluSx SINE Alu -4 308 1 233 333 114 9 chr10 114224290 114224395 -26092370 - L2 LINE L2 -20 3252 3137 291 251 337 11 chr10 114224592 114224779 -26091986 - MIR SINE MIR 0 262 15 192 344 26 97 chr10 114224851 114225162 -26091603 - L2 LINE L2 -430 2884 2596 917 239 7 73 chr10 114225164 114225453 -26091312 + L1M4b LINE L1 1 270 -6589 * 1209 83 10 20 chr10 114225451 114225655 -26091110 - L1P4 LINE L1 -697 5469 5268 1166 193 220 3 chr10 114225834 114226181 -26090584 + Tigger2 DNA MER2_type 23 2713 -5 4521 235 57 43 chr10 114226386 114227065 -26089700 - L1MB8 LINE L1 -169 6507 5839 2301 84 7 3 chr10 114227065 114227375 -26089390 - AluY SINE Alu 0 311 1 4521 235 57 43 chr10 114227375 114229282 -26087483 - L1MB8 LINE L1 -837 5839 3863 1996 121 11 3 chr10 114229287 114229569 -26087196 - AluSg SINE Alu -26 284 1 4153 103 7 2 chr10 114229776 114230386 -26086379 - L1PA12 LINE L1 0 6168 5556 816 106 16 0 chr10 114230391 114230514 -26086251 + L1PA12 LINE L1 5410 5534 -627 1158 253 66 14 chr10 114230520 114231002 -26085763 - L1MB8 LINE L1 -3010 3634 3128 868 222 103 33 chr10 114231007 114231280 -26085485 - MLT1D LTR MaLR -3 502 226 1775 138 154 39 chr10 114231326 114231710 -26085055 + MSTA LTR MaLR 1 428 0 8440 194 24 4 chr10 114231710 114233311 -26083454 + MSTA-int LTR MaLR 1 1634 -17 2051 142 134 8 chr10 114233328 114233708 -26083057 + MSTA LTR MaLR 1 428 0 395 286 0 80 chr10 114233708 114233883 -26082882 - MLT1D LTR MaLR -342 163 3 1036 265 95 23 chr10 114233892 114234737 -26082028 - L1MB8 LINE L1 -3526 3118 2205 1730 250 42 84 chr10 114234743 114236721 -26080044 - L1MB8 LINE L1 -4540 2106 14 1012 168 98 14 chr10 114237854 114238068 -26078697 + MER46A DNA MER2_type 1 232 -4 2836 242 50 19 chr10 114238196 114238944 -26077821 + HERVL74 LTR ERVL 1181 1951 -3734 1043 208 7 3 chr10 114240102 114240305 -26076460 + MSTA LTR MaLR 1 201 -225 2216 187 31 7 chr10 114241065 114241487 -26075278 + MSTB1 LTR MaLR 1 432 0 587 213 42 71 chr10 114241510 114241785 -26074980 - MLT1A1 LTR MaLR 0 396 1 2185 199 17 55 chr10 114243694 114244208 -26072557 - MLT2B2 LTR ERVL -18 471 1 1974 188 11 0 chr10 114244237 114244598 -26072167 + MER57A LTR ERV1 37 401 -2 1272 200 122 95 chr10 114245329 114245911 -26070854 + LTR49 LTR ERV1 4 541 -1 253 338 71 39 chr10 114246463 114246617 -26070148 + L2 LINE L2 2608 2766 -548 623 61 0 0 chr10 114246918 114247000 -26069765 - L1MA7 LINE L1 -26 6265 6184 328 297 21 28 chr10 114246996 114247141 -26069624 - L1M4 LINE L1 -1131 5015 4872 * 369 253 12 59 chr10 114247148 114247318 -26069447 - L1M4 LINE L1 -1408 4738 4577 1923 179 38 98 chr10 114247585 114247958 -26068807 - MSTB2 LTR MaLR -7 450 111 2213 95 0 7 chr10 114247958 114248252 -26068513 - AluY SINE Alu -17 294 3 1923 179 38 98 chr10 114248252 114248357 -26068408 - MSTB2 LTR MaLR -346 111 1 2385 209 146 70 chr10 114248362 114249182 -26067583 - MSTB2-int LTR MaLR -5 1646 764 2381 87 0 0 chr10 114249214 114249525 -26067240 + AluY SINE Alu 1 311 0 2637 226 34 10 chr10 114249526 114250204 -26066561 + L1MB8 LINE L1 5316 6009 -169 1091 206 207 5 chr10 114250409 114250757 -26066008 - Tigger2 DNA MER2_type -5 2713 22 198 71 0 0 chr10 114250757 114250785 -26065980 + (TG)n Simple_repeat Simple_repeat 2 29 0 210 191 0 0 chr10 114250791 114250833 -26065932 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1532 144 116 0 chr10 114251443 114251589 -26065176 - L1PA16 LINE L1 -2 6164 6019 291 224 156 73 chr10 114251589 114251768 -26064997 - L1MA4 LINE L1 -293 6007 5814 302 148 0 0 chr10 114253362 114253416 -26063349 + L1MA6 LINE L1 6234 6287 -13 1466 164 63 114 chr10 114253417 114253874 -26062891 - MER61C LTR ERV1 0 434 1 226 264 125 14 chr10 114253996 114254068 -26062697 + L2 LINE L2 3173 3252 -20 550 260 139 14 chr10 114254992 114255200 -26061565 - MIR SINE MIR 0 262 29 432 0 0 0 chr10 114257206 114257254 -26059511 + (TAGG)n Simple_repeat Simple_repeat 4 51 0 432 0 0 0 chr10 114257525 114257573 -26059192 + (TAGG)n Simple_repeat Simple_repeat 4 51 0 229 288 0 17 chr10 114257774 114257833 -26058932 + MIR SINE MIR 91 148 -114 452 311 63 11 chr10 114257938 114258128 -26058637 - MIR SINE MIR -10 252 53 5130 222 13 10 chr10 114258951 114260193 -26056572 - L1PA16 LINE L1 -1002 5144 3899 5541 139 31 2 chr10 114260200 114261159 -26055606 + L1PA16 LINE L1 5177 6157 -9 183 233 0 23 chr10 114261384 114261427 -26055338 - MIR SINE MIR -5 257 216 * 190 229 0 0 chr10 114261393 114261428 -26055337 - L2 LINE L2 -19 3253 3219 324 188 0 0 chr10 114261428 114261497 -26055268 + (TG)n Simple_repeat Simple_repeat 2 70 0 518 268 64 22 chr10 114261592 114262002 -26054763 + L1ME2 LINE L1 5393 5864 -300 182 229 0 0 chr10 114262362 114262397 -26054368 - L2 LINE L2 -19 3253 3219 324 188 0 0 chr10 114262397 114262466 -26054299 + (TG)n Simple_repeat Simple_repeat 2 70 0 1432 249 105 27 chr10 114262564 114263254 -26053511 + L1ME2 LINE L1 5396 6164 0 27 73 0 0 chr10 114263550 114263605 -26053160 + AT_rich Low_complexity Low_complexity 1 55 0 336 264 0 38 chr10 114263836 114263942 -26052823 + GA-rich Low_complexity Low_complexity 3 104 0 29 32 0 48 chr10 114265500 114265562 -26051203 + AT_rich Low_complexity Low_complexity 1 59 0 368 294 40 52 chr10 114265803 114266055 -26050710 - L1ME4a LINE L1 -81 6040 5792 190 292 0 21 chr10 114266240 114266288 -26050477 + MIR SINE MIR 23 69 -139 406 231 32 109 chr10 114266785 114266941 -26049824 - MIR SINE MIR -70 192 49 308 256 57 104 chr10 114267309 114267352 -26049413 + L1ME4a LINE L1 5790 5833 -288 2303 105 0 0 chr10 114267352 114267656 -26049109 + AluSx SINE Alu 1 304 -8 308 256 57 104 chr10 114267656 114267909 -26048856 + L1ME4a LINE L1 5833 6072 -49 22 0 0 0 chr10 114268660 114268682 -26048083 + AT_rich Low_complexity Low_complexity 1 22 0 240 373 24 16 chr10 114269344 114269470 -26047295 + L3 LINE CR1 1438 1564 -13 239 271 154 55 chr10 114269674 114269853 -26046912 + MIR SINE MIR 23 222 -40 36 62 0 0 chr10 114270926 114270990 -26045775 + AT_rich Low_complexity Low_complexity 1 64 0 2116 115 0 0 chr10 114271324 114271619 -26045146 - AluSg SINE Alu -6 304 10 278 192 0 27 chr10 114271619 114271692 -26045073 + L1 LINE L1 4580 4650 -1496 479 222 119 0 chr10 114271892 114272073 -26044692 - L1MD3 LINE L1 -10 7985 7606 * 1088 203 30 20 chr10 114272064 114272335 -26044430 - L1P4 LINE L1 -617 5544 5276 * 2759 197 107 97 chr10 114272327 114272880 -26043885 - L1MC3 LINE L1 -33 7752 7111 239 257 81 27 chr10 114272880 114272954 -26043811 - MLT1F1 LTR MaLR -442 125 48 2759 197 107 97 chr10 114272954 114273338 -26043427 - L1MC3 LINE L1 -674 7111 6732 7398 35 9 0 chr10 114273344 114274773 -26041992 - L1PA3 LINE L1 -5 6150 4716 4913 32 0 0 chr10 114274773 114275355 -26041410 + L1PA3 LINE L1 5569 6152 -3 257 211 28 28 chr10 114275467 114275576 -26041189 + GA-rich Low_complexity Low_complexity 3 111 0 317 341 67 17 chr10 114276348 114276527 -26040238 - MER5A DNA MER1_type 0 189 2 223 299 0 15 chr10 114276834 114276901 -26039864 - MIR SINE MIR -60 148 83 11477 41 4 0 chr10 114277478 114278894 -26037871 - L1P LINE L1 -794 5352 3931 34947 52 2 1 chr10 114278894 114284141 -26032624 + L1PA5 LINE L1 910 6166 0 1304 73 30 0 chr10 114284159 114284323 -26032442 + AluY SINE Alu 127 295 -16 302 200 32 95 chr10 114284525 114284620 -26032145 - L1MC4 LINE L1 -1339 6703 6615 319 288 0 0 chr10 114284824 114284897 -26031868 - MER58 DNA MER1_type 0 2420 2348 5495 67 6 10 chr10 114286080 114286811 -26029954 - L1PA8 LINE L1 0 6172 5445 2033 151 31 26 chr10 114287816 114288167 -26028598 - MER46B DNA MER2_type -8 228 1 340 200 24 35 chr10 114288096 114288181 -26028584 + MER46A DNA MER2_type 75 158 -78 * 1610 137 6 116 chr10 114288427 114288764 -26028001 - AluSp SINE Alu -13 300 1 506 340 75 12 chr10 114289610 114289851 -26026914 + MIR SINE MIR 3 258 -4 238 296 44 7 chr10 114290551 114290686 -26026079 + L1MC4 LINE L1 7106 7245 -797 414 353 34 65 chr10 114291660 114291952 -26024813 + MLT1K LTR MaLR 16 298 -290 401 204 28 0 chr10 114292026 114292168 -26024597 + (TA)n Simple_repeat Simple_repeat 2 147 0 783 330 90 20 chr10 114294161 114294607 -26022158 - MLT1H LTR MaLR 0 549 73 276 377 53 0 chr10 114295667 114295781 -26020984 - L2 LINE L2 -2 3270 3151 1692 157 8 0 chr10 114296030 114296291 -26020474 + AluSx SINE Alu 40 302 -10 203 341 12 24 chr10 114296351 114296436 -26020329 - L2 LINE L2 -206 3066 2983 641 279 73 25 chr10 114296604 114296808 -26019957 + MIR SINE MIR 16 229 -33 2129 173 8 24 chr10 114297105 114297197 -26019568 + MLT1A1 LTR MaLR 1 93 -272 1448 169 214 11 chr10 114297197 114297553 -26019212 - MSTA LTR MaLR 0 428 1 2129 173 8 24 chr10 114297553 114297831 -26018934 + MLT1A1 LTR MaLR 93 365 0 208 163 0 41 chr10 114298956 114299005 -26017760 + GA-rich Low_complexity Low_complexity 2 48 0 707 194 85 61 chr10 114299318 114299565 -26017200 + Charlie5 DNA MER1_type 2372 2624 0 379 233 78 0 chr10 114299948 114300051 -26016714 + HAL1 LINE L1 1306 1416 -1091 866 241 60 51 chr10 114300061 114300397 -26016368 + MER2 DNA MER2_type 1 339 -6 779 235 71 143 chr10 114300511 114301131 -26015634 - MLT1H1 LTR MaLR -10 580 2 359 337 57 16 chr10 114301137 114301330 -26015435 + HAL1 LINE L1 1565 1765 -742 21 0 0 0 chr10 114301572 114301593 -26015172 + AT_rich Low_complexity Low_complexity 1 21 0 335 203 0 98 chr10 114301641 114301764 -26015001 + HAL1 LINE L1 2287 2397 -110 402 292 211 22 chr10 114301775 114302097 -26014668 + L3 LINE CR1 1083 1465 -112 2175 94 0 3 chr10 114302176 114302475 -26014290 + AluY SINE Alu 1 298 -13 393 254 188 0 chr10 114302645 114302810 -26013955 - MER117 DNA MER1_type -1 196 1 265 315 133 21 chr10 114302972 114303115 -26013650 + MER91B DNA MER1_type 7 165 -25 267 358 60 20 chr10 114303201 114303352 -26013413 - MIR3 SINE MIR -36 172 16 195 42 0 0 chr10 114303639 114303663 -26013102 + (A)n Simple_repeat Simple_repeat 1 24 0 2118 111 3 0 chr10 114304054 114304342 -26012423 + AluSx SINE Alu 3 291 -21 303 301 66 47 chr10 114304495 114304689 -26012076 - MIR SINE MIR -59 203 12 240 86 0 0 chr10 114305055 114305090 -26011675 + (TG)n Simple_repeat Simple_repeat 2 36 0 256 244 47 0 chr10 114305092 114305178 -26011587 + L1MC4 LINE L1 6614 6703 -1339 331 315 0 0 chr10 114305182 114305271 -26011494 - L1MC4 LINE L1 -1339 6703 6615 235 152 0 0 chr10 114305302 114305348 -26011417 - LTR66 LTR ERVL -171 439 394 321 218 0 0 chr10 114305350 114305428 -26011337 + (TA)n Simple_repeat Simple_repeat 2 79 0 1809 202 86 37 chr10 114305431 114305886 -26010879 - MLT2B1 LTR ERVL -43 477 1 1829 77 4 31 chr10 114306246 114306505 -26010260 + AluY SINE Alu 1 252 -59 1635 175 46 7 chr10 114306890 114307054 -26009711 - AluJo SINE Alu -16 296 115 434 18 18 0 chr10 114307054 114307109 -26009656 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1635 175 46 7 chr10 114307109 114307229 -26009536 - AluJo SINE Alu -197 115 1 1988 135 13 26 chr10 114308210 114308522 -26008243 - MER1A DNA MER1_type -135 394 87 4981 87 29 0 chr10 114308522 114309377 -26007388 + L1PA10 LINE L1 5078 5956 -212 2884 258 51 36 chr10 114310289 114311396 -26005369 - L1M4 LINE L1 -1398 4748 3626 453 257 28 60 chr10 114311407 114311871 -26004894 - L1M4 LINE L1 -2623 3523 2988 * 1596 228 16 9 chr10 114311831 114312260 -26004505 + L1M4 LINE L1 4080 4511 -1635 17409 114 14 9 chr10 114312262 114315021 -26001744 + L1P LINE L1 1158 3928 -2218 1960 148 10 0 chr10 114315772 114316069 -26000696 - AluSg SINE Alu -10 300 1 904 241 66 55 chr10 114318423 114319046 -25997719 + L1MEc LINE L1 2055 2639 -3576 * 1590 212 41 5 chr10 114319033 114319420 -25997345 - L1MB5 LINE L1 -1 6173 5773 613 186 36 0 chr10 114319416 114319556 -25997209 + L1M4 LINE L1 5061 5205 -941 * 1035 241 9 28 chr10 114319551 114319871 -25996894 - L1MB5 LINE L1 -1590 4556 4243 21 57 0 0 chr10 114319891 114319926 -25996839 + AT_rich Low_complexity Low_complexity 1 35 0 5611 10 0 0 chr10 114320654 114321282 -25995483 - L1HS LINE L1 -1 6154 5527 2387 7 0 0 chr10 114321283 114321563 -25995202 + L1P1 LINE L1 5254 5533 -622 23 0 0 0 chr10 114322317 114322340 -25994425 + AT_rich Low_complexity Low_complexity 1 23 0 186 71 0 0 chr10 114322966 114322994 -25993771 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2162 110 4 0 chr10 114322998 114323279 -25993486 - AluSx SINE Alu -30 282 1 567 288 81 32 chr10 114323584 114323869 -25992896 + MLT1L LTR MaLR 315 613 -2 2496 52 0 7 chr10 114324626 114324932 -25991833 + AluY SINE Alu 1 304 -7 2018 98 34 17 chr10 114326085 114326380 -25990385 + AluSg SINE Alu 1 300 -10 354 23 0 0 chr10 114326479 114326522 -25990243 + (TG)n Simple_repeat Simple_repeat 2 44 0 284 198 187 11 chr10 114326581 114326672 -25990093 + MIR SINE MIR 91 197 -65 21 0 0 0 chr10 114327554 114327575 -25989190 + AT_rich Low_complexity Low_complexity 1 21 0 418 307 100 4 chr10 114328185 114328416 -25988349 - MLT1L LTR MaLR -17 598 346 2271 101 0 7 chr10 114329227 114329525 -25987240 + AluSx SINE Alu 1 296 -16 220 391 56 15 chr10 114329716 114329913 -25986852 - MIR3 SINE MIR -1 207 3 342 322 44 22 chr10 114329922 114330105 -25986660 + MIR SINE MIR 4 190 -72 697 257 6 0 chr10 114330365 114330536 -25986229 + MIR SINE MIR 85 256 -6 2119 123 10 3 chr10 114331098 114331406 -25985359 + AluSx SINE Alu 3 312 0 594 226 136 17 chr10 114331794 114331971 -25984794 + MER58A DNA MER1_type 27 224 0 24 0 0 0 chr10 114332164 114332188 -25984577 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 114332292 114332316 -25984449 + AT_rich Low_complexity Low_complexity 1 24 0 304 307 18 15 chr10 114332423 114332593 -25984172 - MIR SINE MIR 0 262 48 7134 65 15 1 chr10 114332724 114333874 -25982891 + L1PA7 LINE L1 4992 6154 0 1413 234 130 47 chr10 114333884 114334483 -25982282 - L1MC4 LINE L1 -149 7893 7245 183 80 0 0 chr10 114334483 114334508 -25982257 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 638 208 42 42 chr10 114334538 114334706 -25982059 - L1MC4 LINE L1 -1004 7038 6871 714 155 22 142 chr10 114334760 114334986 -25981779 - L1MA10 LINE L1 -2 6332 6134 890 242 139 39 chr10 114335060 114335390 -25981375 + MLT1A1 LTR MaLR 1 363 -2 496 231 8 30 chr10 114335405 114335539 -25981226 - L1MC4 LINE L1 -1435 6607 6477 188 196 0 20 chr10 114335905 114335956 -25980809 + GA-rich Low_complexity Low_complexity 2 51 0 291 56 56 0 chr10 114336388 114336442 -25980323 + (TG)n Simple_repeat Simple_repeat 2 58 0 708 254 124 5 chr10 114337129 114337346 -25979419 + MIR SINE MIR 9 251 -11 353 299 31 21 chr10 114337574 114337671 -25979094 - L2 LINE L2 -26 3246 3149 449 288 34 34 chr10 114338635 114338781 -25977984 + MIR SINE MIR 110 255 -7 238 354 31 0 chr10 114340390 114340486 -25976279 - L3 LINE CR1 -111 1466 1368 210 154 0 0 chr10 114340592 114340631 -25976134 + A-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr10 114340715 114340738 -25976027 + AT_rich Low_complexity Low_complexity 1 23 0 320 288 68 40 chr10 114341146 114341323 -25975442 + MIR SINE MIR 57 238 -24 21 57 0 0 chr10 114341331 114341366 -25975399 + AT_rich Low_complexity Low_complexity 1 35 0 243 354 60 62 chr10 114341484 114341837 -25974928 + L2 LINE L2 2850 3201 -71 196 264 126 0 chr10 114341897 114341984 -25974781 - L2 LINE L2 -2 3311 3214 24 32 0 0 chr10 114342358 114342389 -25974376 + AT_rich Low_complexity Low_complexity 1 31 0 2197 119 0 0 chr10 114342456 114342749 -25974016 - AluSg SINE Alu -17 293 1 1440 192 111 90 chr10 114343817 114344437 -25972328 + L1MDa LINE L1 1924 2556 -3984 326 308 29 0 chr10 114344548 114344652 -25972113 - L3 LINE CR1 -103 1474 1368 307 145 79 13 chr10 114344727 114344803 -25971962 + L1MDa LINE L1 2570 2650 -3890 927 241 0 0 chr10 114344818 114345009 -25971756 - MER54A LTR ERVL -17 884 694 * 1599 209 10 3 chr10 114345006 114345308 -25971457 - MER54A LTR ERVL -597 304 1 818 246 35 11 chr10 114345317 114345600 -25971165 + L1MDa LINE L1 2693 2974 -3566 237 296 30 52 chr10 114345634 114345769 -25970996 + MIR SINE MIR 113 244 -18 1005 244 37 60 chr10 114346746 114347098 -25969667 - LTR9 LTR ERV1 0 612 269 2087 100 32 10 chr10 114347099 114347409 -25969356 - HUERS-P3b LTR ERV1 -5122 2296 1980 322 312 139 55 chr10 114348399 114348729 -25968036 + L1MEc LINE L1 27 384 -6012 621 197 83 0 chr10 114349064 114349196 -25967569 + L1MB8 LINE L1 6034 6176 -2 264 325 0 0 chr10 114349284 114349361 -25967404 + (CATA)n Simple_repeat Simple_repeat 4 80 0 926 228 35 48 chr10 114349434 114349724 -25967041 + pTR5 LTR ERV1 743 1028 -1410 946 66 177 0 chr10 114349803 114349952 -25966813 + LTR12 LTR ERV1 1 1613 -551 36674 94 6 10 chr10 114350118 114355108 -25961657 - HERV9 LTR ERV1 -3430 4969 1 5480 90 24 92 chr10 114355108 114355995 -25960770 - LTR12 LTR ERV1 0 826 1 6742 111 8 9 chr10 114356075 114357264 -25959501 - Harlequin LTR ERV1 0 8399 504 687 154 146 15 chr10 114357260 114357527 -25959238 - Harlequin LTR ERV1 -5755 1141 840 * 28805 99 13 8 chr10 114357494 114361546 -25955219 - Harlequin LTR ERV1 -3425 4974 903 949 108 43 0 chr10 114361691 114361830 -25954935 - LTR57-int LTR ERVL -4134 1209 1065 2368 171 20 40 chr10 114361841 114362339 -25954426 + pTR5 LTR ERV1 541 1028 -1410 5349 106 22 67 chr10 114362419 114363284 -25953481 + LTR12 LTR ERV1 1 826 0 228 111 0 0 chr10 114363697 114363733 -25953032 + (CA)n Simple_repeat Simple_repeat 1 36 0 460 274 37 0 chr10 114364074 114364209 -25952556 + LTR16C LTR ERVL 336 475 -16 374 328 121 26 chr10 114364487 114364719 -25952046 + MIR SINE MIR 6 259 -3 192 350 70 30 chr10 114365420 114365520 -25951245 - L2 LINE L2 -8 3305 3202 742 318 142 19 chr10 114365810 114366295 -25950470 + MLT1K LTR MaLR 44 588 0 2280 79 3 55 chr10 114366534 114366862 -25949903 + AluY SINE Alu 1 311 0 2430 146 22 0 chr10 114366925 114367281 -25949484 + THE1B LTR MaLR 1 364 0 395 287 36 24 chr10 114367421 114367588 -25949177 - MIR SINE MIR -2 260 92 194 231 46 15 chr10 114368277 114368342 -25948423 - MIR SINE MIR -96 166 100 207 329 43 0 chr10 114368936 114369006 -25947759 + MIR SINE MIR 74 146 -116 251 295 0 0 chr10 114369156 114369217 -25947548 - Charlie8 DNA MER1_type -1 2416 2356 690 303 66 22 chr10 114369270 114369498 -25947267 + MIR SINE MIR 9 246 -16 187 294 29 0 chr10 114369635 114369703 -25947062 - L2 LINE L2 -21 3251 3182 23 0 0 0 chr10 114371300 114371323 -25945442 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 114371890 114371918 -25944847 + AT_rich Low_complexity Low_complexity 1 28 0 181 233 70 0 chr10 114372172 114372215 -25944550 - MIR SINE MIR -131 77 32 398 279 102 78 chr10 114372231 114372475 -25944290 + MIR SINE MIR 13 262 0 1741 103 39 0 chr10 114372554 114372786 -25943979 - AluSx SINE Alu -14 298 58 378 287 91 22 chr10 114372856 114373085 -25943680 + MIR SINE MIR 1 248 -14 233 191 73 59 chr10 114374184 114374252 -25942513 + Tigger5 DNA MER2_type 2251 2319 -4 352 222 14 0 chr10 114374293 114374365 -25942400 + Tigger5 DNA MER2_type 2237 2309 -14 1889 139 46 27 chr10 114374529 114374615 -25942150 - MER7A DNA MER2_type -2693 345 262 2159 183 156 156 chr10 114374615 114375053 -25941712 + LTR28 LTR ERV1 2 439 -581 2105 114 0 0 chr10 114375053 114375326 -25941439 - AluSg SINE Alu -37 273 1 2159 183 156 156 chr10 114375326 114375906 -25940859 + LTR28 LTR ERV1 438 1020 0 1889 139 46 27 chr10 114375906 114376158 -25940607 - MER7A DNA MER2_type -2776 262 1 746 218 122 109 chr10 114376643 114377032 -25939733 + MER57A LTR ERV1 1 403 0 279 54 0 0 chr10 114377223 114377260 -25939505 + (TG)n Simple_repeat Simple_repeat 2 38 0 1226 174 13 21 chr10 114377289 114377524 -25939241 - AluJo SINE Alu -29 283 51 300 27 0 0 chr10 114377745 114377782 -25938983 + (TC)n Simple_repeat Simple_repeat 1 37 0 * 333 0 0 0 chr10 114377781 114377818 -25938947 + (CA)n Simple_repeat Simple_repeat 1 37 0 221 331 8 10 chr10 114377917 114378021 -25938744 + MIR SINE MIR 59 164 -66 2316 99 0 3 chr10 114378438 114378750 -25938015 - AluY SINE Alu 0 311 1 224 224 20 0 chr10 114378941 114378990 -25937775 + (CA)n Simple_repeat Simple_repeat 1 50 0 216 0 0 0 chr10 114379859 114379883 -25936882 + (TA)n Simple_repeat Simple_repeat 2 25 0 263 261 174 11 chr10 114379964 114380056 -25936709 - L2 LINE L2 -4 3268 3162 228 381 52 0 chr10 114381347 114381444 -25935321 + L2 LINE L2 3157 3258 -14 253 358 87 63 chr10 114381922 114382380 -25934385 - L2 LINE L2 0 3272 2804 1848 190 51 3 chr10 114383319 114383650 -25933115 - MLT1A1 LTR MaLR -18 347 1 288 0 0 0 chr10 114385594 114385626 -25931139 + (TG)n Simple_repeat Simple_repeat 1 32 0 610 286 74 0 chr10 114387094 114387283 -25929482 - MIR SINE MIR -16 246 44 366 182 0 0 chr10 114387380 114387400 -25929365 + GA-rich Low_complexity Low_complexity 1 20 -68 279 54 0 0 chr10 114387400 114387437 -25929328 + (TG)n Simple_repeat Simple_repeat 1 37 0 366 182 0 0 chr10 114387437 114387504 -25929261 + GA-rich Low_complexity Low_complexity 19 88 0 213 344 120 16 chr10 114388373 114388498 -25928267 + MIR SINE MIR 49 186 -76 1750 169 0 25 chr10 114388566 114388880 -25927885 - AluJb SINE Alu -6 306 1 194 67 33 67 chr10 114389372 114389432 -25927333 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 2003 133 3 7 chr10 114390499 114390799 -25925966 + AluSx SINE Alu 1 299 -13 477 245 65 22 chr10 114391521 114391660 -25925105 + MIR SINE MIR 63 207 -55 26 50 0 0 chr10 114392662 114392702 -25924063 + AT_rich Low_complexity Low_complexity 1 40 0 968 227 27 0 chr10 114392782 114393038 -25923727 - L1M4 LINE L1 -777 5369 5107 4538 247 57 27 chr10 114393191 114393744 -25923021 - L1M LINE L1 -777 5369 4834 1443 212 14 10 chr10 114393744 114394037 -25922728 - AluJo SINE Alu -14 298 5 4538 247 57 27 chr10 114394037 114395131 -25921634 - L1M LINE L1 -1312 4834 3688 843 273 45 24 chr10 114395149 114395614 -25921151 - L1M4 LINE L1 -2851 3295 2821 24 53 0 0 chr10 114395623 114395661 -25921104 + AT_rich Low_complexity Low_complexity 1 38 0 2009 128 0 24 chr10 114395661 114395957 -25920808 - AluSx SINE Alu -23 289 1 389 238 0 0 chr10 114395957 114396058 -25920707 - L1M4 LINE L1 -3319 2827 2727 581 107 38 92 chr10 114396418 114396549 -25920216 - L1MA6 LINE L1 -404 5896 5773 1053 111 126 5 chr10 114396549 114396747 -25920018 + L1MA6 LINE L1 6078 6300 0 547 245 25 31 chr10 114396748 114396907 -25919858 + L1MB5 LINE L1 592 749 -5793 227 159 0 45 chr10 114396936 114396980 -25919785 + L1M4 LINE L1 1405 1446 -5119 2839 224 58 38 chr10 114397052 114398836 -25917929 + L1MB5 LINE L1 823 2756 -3890 3099 201 10 7 chr10 114398852 114399540 -25917225 - L1 LINE L1 -1081 5065 4376 2387 7 0 0 chr10 114400793 114401073 -25915692 - L1P1 LINE L1 -622 5533 5254 5648 6 0 0 chr10 114401074 114401701 -25915064 + L1HS LINE L1 5527 6153 -2 186 43 0 0 chr10 114401797 114401820 -25914945 + (T)n Simple_repeat Simple_repeat 1 23 0 206 214 0 0 chr10 114402131 114402173 -25914592 + (CCCTG)n Simple_repeat Simple_repeat 3 44 0 21 57 0 0 chr10 114402430 114402465 -25914300 + AT_rich Low_complexity Low_complexity 1 35 0 1096 232 12 28 chr10 114402485 114402804 -25913961 + L1MB5 LINE L1 4741 5054 -1590 613 186 36 0 chr10 114402799 114402939 -25913826 - L1M4 LINE L1 -941 5274 5130 * 1590 212 41 5 chr10 114402935 114403322 -25913443 + L1MB5 LINE L1 6271 6671 -1 904 241 66 55 chr10 114403309 114403932 -25912833 - L1MEc LINE L1 -3576 2639 2055 * 1960 148 10 0 chr10 114406286 114406583 -25910182 + AluSg SINE Alu 1 300 -10 24453 36 1 1 chr10 114407334 114410351 -25906414 - L1PA3 LINE L1 -2218 3928 910 12181 25 1 0 chr10 114410351 114412566 -25904199 + L1PA3 LINE L1 3931 6152 -3 1857 131 88 20 chr10 114413743 114414094 -25902671 - THE1C LTR MaLR 0 375 1 1428 147 15 31 chr10 114414098 114414211 -25902554 - L1M2 LINE L1 -598 5693 5580 1507 192 7 19 chr10 114414211 114414519 -25902246 + AluJo SINE Alu 3 306 -6 1428 147 15 31 chr10 114414519 114414664 -25902101 - L1M2 LINE L1 -711 5580 5439 501 189 9 0 chr10 114414671 114414782 -25901983 + L1MA8 LINE L1 6177 6288 -3 39 38 0 0 chr10 114414782 114414835 -25901930 + AT_rich Low_complexity Low_complexity 1 53 0 437 264 124 31 chr10 114414864 114414930 -25901835 + L1M4 LINE L1 1220 1278 -5264 216 0 0 0 chr10 114414930 114414954 -25901811 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 437 264 124 31 chr10 114414954 114415145 -25901620 + L1M4 LINE L1 1278 1501 -5041 244 229 71 0 chr10 114415155 114415225 -25901540 - L1MEc LINE L1 -4300 2096 2022 927 213 64 21 chr10 114415225 114415460 -25901305 + MLT1D LTR MaLR 1 245 -260 929 269 76 0 chr10 114415466 114415767 -25900998 + MLT1D LTR MaLR 182 505 0 651 215 36 101 chr10 114415809 114416028 -25900737 + MER20 DNA MER1_type 7 211 -8 322 226 16 32 chr10 114416046 114416170 -25900595 - L1MEc LINE L1 -4411 1985 1864 3512 210 47 16 chr10 114416181 114417430 -25899335 - L1MB8 LINE L1 -2 6176 4887 2270 118 3 0 chr10 114417560 114417866 -25898899 - AluSg SINE Alu -3 307 1 1360 274 22 65 chr10 114418405 114418826 -25897939 - LTR16C LTR ERVL 0 491 94 2243 203 23 49 chr10 114418826 114419354 -25897411 - MLT2B2 LTR ERVL 0 515 2 1360 274 22 65 chr10 114419354 114419442 -25897323 - LTR16C LTR ERVL -397 94 4 225 359 38 15 chr10 114419857 114419988 -25896777 - L2 LINE L2 0 3313 3180 386 337 78 26 chr10 114420346 114420539 -25896226 + MIR SINE MIR 28 230 -32 186 167 74 74 chr10 114420544 114420598 -25896167 + L2 LINE L2 3245 3298 -15 189 0 0 0 chr10 114422544 114422565 -25894200 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 405 336 75 22 chr10 114424291 114424517 -25892248 - MIR SINE MIR -19 243 6 22 35 0 0 chr10 114425069 114425098 -25891667 + AT_rich Low_complexity Low_complexity 1 29 0 240 271 34 119 chr10 114425124 114425301 -25891464 - MIR SINE MIR -55 207 46 495 333 70 16 chr10 114426331 114426574 -25890191 + MIR SINE MIR 5 260 -2 1572 156 207 11 chr10 114426654 114427012 -25889753 + MSTA LTR MaLR 1 428 0 418 279 68 12 chr10 114428152 114428313 -25888452 + MIR SINE MIR 66 235 -27 2067 130 0 3 chr10 114428873 114429158 -25887607 + AluSq SINE Alu 1 284 -29 563 318 33 19 chr10 114430311 114430525 -25886240 - LTR16A LTR ERVL -158 292 76 1711 201 0 6 chr10 114430776 114431090 -25885675 - AluJo SINE Alu 0 312 1 1010 301 67 13 chr10 114431137 114431280 -25885485 - HERV16 LTR ERVL -3552 1444 1310 2361 160 74 7 chr10 114431280 114431712 -25885053 - LOR1b LTR ERV1 0 461 1 1010 301 67 13 chr10 114431712 114432030 -25884735 - HERV16 LTR ERVL -3686 1310 958 242 208 0 0 chr10 114432601 114432649 -25884116 + A-rich Low_complexity Low_complexity 4 51 0 7903 25 2 0 chr10 114432719 114434481 -25882284 - L1HS LINE L1 -1 6154 4388 325 309 30 42 chr10 114435365 114435530 -25881235 - MIR SINE MIR -10 252 90 24 67 0 0 chr10 114435530 114435575 -25881190 + AT_rich Low_complexity Low_complexity 1 45 0 463 135 218 118 chr10 114435881 114436051 -25880714 + MER5A DNA MER1_type 1 187 -2 312 294 73 43 chr10 114436947 114437098 -25879667 + L2 LINE L2 2916 3069 -203 348 145 116 0 chr10 114437256 114437325 -25879440 - L1MDa LINE L1 -6450 90 14 1029 172 9 42 chr10 114437481 114437569 -25879196 - MER3 DNA MER1_type 0 209 120 2020 126 36 3 chr10 114437569 114437870 -25878895 + AluSp SINE Alu 1 311 -2 1029 172 9 42 chr10 114437870 114437996 -25878769 - MER3 DNA MER1_type -89 120 2 27 29 0 0 chr10 114438249 114438283 -25878482 + AT_rich Low_complexity Low_complexity 1 34 0 414 171 0 43 chr10 114438322 114438392 -25878373 + FRAM SINE Alu 65 131 -45 241 276 41 41 chr10 114438688 114438786 -25877979 - MIR SINE MIR -58 204 107 833 203 46 85 chr10 114438815 114439120 -25877645 + LTR37B LTR ERV1 6 298 -170 1198 154 0 5 chr10 114439154 114439349 -25877416 + LTR29 LTR ERV1 425 618 -4 1806 85 4 23 chr10 114439383 114439641 -25877124 - AluY SINE Alu -4 307 55 466 304 44 24 chr10 114439696 114439946 -25876819 - L1MC/D LINE L1 -2138 5670 5416 3846 177 30 7 chr10 114439990 114440695 -25876070 - MER72 LTR ERV1 0 722 2 1230 167 0 14 chr10 114441355 114441570 -25875195 - AluSg SINE Alu -98 212 1 23 33 0 0 chr10 114441570 114441600 -25875165 + AT_rich Low_complexity Low_complexity 1 30 0 680 216 0 41 chr10 114441608 114441779 -25874986 - L1MB5 LINE L1 -10 6164 6001 349 329 40 40 chr10 114441791 114442046 -25874719 + L2 LINE L2 2764 3016 -256 216 0 0 0 chr10 114442433 114442457 -25874308 + (A)n Simple_repeat Simple_repeat 1 24 0 2054 133 3 3 chr10 114443305 114443607 -25873158 - AluSx SINE Alu -10 302 1 512 309 21 46 chr10 114443779 114443973 -25872792 - MIR SINE MIR -1 261 73 180 111 0 0 chr10 114444055 114444082 -25872683 + (T)n Simple_repeat Simple_repeat 1 27 0 267 272 146 19 chr10 114444082 114444185 -25872580 - MIR SINE MIR -71 191 76 196 256 70 105 chr10 114444705 114444877 -25871888 - MIR SINE MIR -31 231 66 212 336 224 4 chr10 114445374 114445615 -25871150 + L3 LINE CR1 1223 1516 -61 2673 23 3 0 chr10 114445634 114445936 -25870829 - AluY SINE Alu -8 303 1 1883 89 76 0 chr10 114445936 114446239 -25870526 - L1P LINE L1 -3305 2841 2516 2283 114 0 11 chr10 114446241 114446609 -25870156 + L1P LINE L1 2160 2523 -3623 438 329 83 21 chr10 114446698 114446938 -25869827 + MIR SINE MIR 1 255 -7 * 578 306 64 18 chr10 114446934 114447153 -25869612 - MIR SINE MIR -2 260 32 256 254 169 17 chr10 114448201 114448319 -25868446 - MIR SINE MIR -13 249 114 25 51 0 0 chr10 114448347 114448386 -25868379 + AT_rich Low_complexity Low_complexity 1 39 0 2148 82 26 7 chr10 114449520 114449825 -25866940 + L1PA13 LINE L1 5853 6163 0 289 253 89 0 chr10 114450582 114450661 -25866104 - MIR3 SINE MIR -30 178 93 597 274 70 33 chr10 114450670 114450911 -25865854 + REP3 LTR ERV 8 257 -305 411 326 118 11 chr10 114451026 114451204 -25865561 + L3 LINE CR1 1355 1551 -26 248 202 0 0 chr10 114451398 114451456 -25865309 + MIR SINE MIR 102 158 -65 355 308 15 8 chr10 114452540 114452673 -25864092 + MIR SINE MIR 14 147 -115 1613 196 0 48 chr10 114453330 114453642 -25863123 + AluJo SINE Alu 1 297 -15 35 71 0 0 chr10 114453643 114453713 -25863052 + AT_rich Low_complexity Low_complexity 1 70 0 276 292 9 53 chr10 114454103 114454216 -25862549 - MER77 LTR ERV1 -419 186 79 313 344 83 13 chr10 114454344 114454501 -25862264 + MER5B DNA MER1_type 11 178 0 228 263 0 66 chr10 114454817 114454893 -25861872 - MIR SINE MIR -66 142 72 2269 69 6 59 chr10 114455827 114456147 -25860618 - AluY SINE Alu -8 303 1 532 263 55 55 chr10 114457019 114457236 -25859529 + L2 LINE L2 3088 3304 -9 804 247 67 14 chr10 114457386 114457609 -25859156 - MIR SINE MIR -3 259 25 2178 122 3 0 chr10 114457704 114457999 -25858766 - AluSg SINE Alu -14 296 1 24 77 0 0 chr10 114458569 114458621 -25858144 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr10 114459740 114459761 -25857004 + AT_rich Low_complexity Low_complexity 1 21 0 180 331 52 52 chr10 114460033 114460169 -25856596 - L2 LINE L2 0 3272 3137 285 282 82 9 chr10 114460288 114460398 -25856367 - MIR SINE MIR -67 195 78 291 157 102 0 chr10 114460525 114460601 -25856164 - MLT1J2 LTR MaLR -8 438 354 449 261 11 72 chr10 114460746 114460926 -25855839 - MLT1J2 LTR MaLR -279 171 3 418 197 17 0 chr10 114460935 114461052 -25855713 + (TA)n Simple_repeat Simple_repeat 1 119 0 2105 131 44 19 chr10 114461859 114462225 -25854540 - THE1C LTR MaLR 0 375 1 193 260 154 48 chr10 114462458 114462562 -25854203 - MIR SINE MIR -1 261 147 3030 158 16 8 chr10 114462653 114462774 -25853991 - MER41E LTR ERV1 0 512 393 2273 132 0 0 chr10 114462774 114463084 -25853681 + AluSg SINE Alu 1 310 0 3030 158 16 8 chr10 114463084 114463470 -25853295 - MER41E LTR ERV1 -119 393 1 255 327 13 47 chr10 114463789 114463939 -25852826 - MLT1K LTR MaLR -318 270 126 397 240 41 94 chr10 114463999 114464170 -25852595 - MIR SINE MIR -97 165 4 223 287 85 32 chr10 114465003 114465097 -25851668 - MER5A DNA MER1_type -8 170 72 232 217 0 0 chr10 114465208 114465254 -25851511 - LTR53 LTR ERVL -2 517 472 207 114 0 0 chr10 114465494 114465529 -25851236 + (TA)n Simple_repeat Simple_repeat 2 36 0 31 44 0 0 chr10 114465549 114465594 -25851171 + AT_rich Low_complexity Low_complexity 1 45 0 1866 121 18 7 chr10 114465839 114466111 -25850654 + AluSc SINE Alu 24 298 -11 278 205 72 0 chr10 114466686 114466769 -25849996 - MLT1J1 LTR MaLR -5 441 353 210 241 19 0 chr10 114467686 114467740 -25849025 + (CAT)n Simple_repeat Simple_repeat 1 55 0 267 287 0 40 chr10 114467941 114468042 -25848723 + (TAGG)n Simple_repeat Simple_repeat 2 98 0 213 222 0 22 chr10 114468769 114468814 -25847951 + (TAGG)n Simple_repeat Simple_repeat 2 45 0 1896 103 7 11 chr10 114468922 114469193 -25847572 + AluSc SINE Alu 40 309 0 253 236 0 0 chr10 114469337 114469392 -25847373 + MLT1D LTR MaLR 1 55 -450 38334 55 29 4 chr10 114471593 114477590 -25839175 + L1PA7 LINE L1 2 6150 -4 3995 172 83 8 chr10 114477950 114478718 -25838047 + LTR1B LTR ERV1 1 826 0 933 298 79 47 chr10 114478791 114479289 -25837476 - L2 LINE L2 0 3313 2794 1970 167 0 0 chr10 114479289 114479594 -25837171 - AluSx SINE Alu -5 307 3 933 298 79 47 chr10 114479594 114479726 -25837039 - L2 LINE L2 -519 2794 2668 278 328 59 25 chr10 114479838 114479957 -25836808 + L2 LINE L2 3150 3272 0 636 14 0 0 chr10 114480280 114480353 -25836412 + (TTCC)n Simple_repeat Simple_repeat 1 73 0 678 338 39 4 chr10 114481862 114482093 -25834672 + MIR SINE MIR 2 240 -22 1655 227 98 75 chr10 114483030 114484042 -25832723 + L1M4 LINE L1 4112 5146 -1000 532 263 55 55 chr10 114484987 114485204 -25831561 + L2 LINE L2 3088 3304 -9 804 247 67 14 chr10 114485354 114485577 -25831188 - MIR SINE MIR -3 259 25 2175 122 3 0 chr10 114485672 114485967 -25830798 - AluSg SINE Alu -14 296 1 1483 169 0 0 chr10 114485968 114486240 -25830525 - L1P LINE L1 -1131 5015 4744 319 340 91 14 chr10 114486361 114486570 -25830195 + L2 LINE L2 877 1101 -2213 2267 311 78 9 chr10 114486957 114487860 -25828905 + HERV16 LTR ERVL 1665 2629 -2367 2032 161 35 15 chr10 114487907 114488305 -25828460 - MSTA LTR MaLR 0 428 23 2069 138 10 0 chr10 114488392 114488690 -25828075 - AluSx SINE Alu -11 301 1 461 103 0 69 chr10 114488691 114488778 -25827987 + MER3 DNA MER1_type 129 209 0 348 145 116 0 chr10 114488934 114489003 -25827762 + L1MDa LINE L1 14 90 -6450 312 294 73 43 chr10 114489161 114489312 -25827453 - L2 LINE L2 -203 3069 2916 463 135 218 118 chr10 114490208 114490378 -25826387 - MER5A DNA MER1_type -2 187 1 24 67 0 0 chr10 114490684 114490729 -25826036 + AT_rich Low_complexity Low_complexity 1 45 0 325 309 30 42 chr10 114490729 114490894 -25825871 + MIR SINE MIR 90 252 -10 257 309 186 29 chr10 114491697 114491901 -25824864 + MIR SINE MIR 12 247 -15 2014 123 55 30 chr10 114491936 114492302 -25824463 + THE1C LTR MaLR 1 375 0 746 276 44 51 chr10 114492784 114493197 -25823568 + MER92A LTR ERV1 3 412 0 468 299 86 18 chr10 114493507 114493845 -25822920 - L1ME4a LINE L1 -239 5882 5522 25 95 0 0 chr10 114493856 114493930 -25822835 + AT_rich Low_complexity Low_complexity 1 74 0 1914 171 0 7 chr10 114494918 114495227 -25821538 + AluSx SINE Alu 1 307 -5 933 298 105 28 chr10 114495259 114495725 -25821040 + L2 LINE L2 2812 3313 0 3995 172 83 8 chr10 114495798 114496566 -25820199 - LTR1B LTR ERV1 0 826 1 9662 96 23 11 chr10 114496926 114499152 -25817613 - L1PA7 LINE L1 -4 6150 3906 5098 187 20 26 chr10 114499254 114500345 -25816420 - L1P LINE L1 -5051 1095 11 1481 247 67 23 chr10 114500492 114501159 -25815606 + L1ME3A LINE L1 5195 5910 -260 1408 172 51 10 chr10 114501159 114501455 -25815310 - MER89 LTR ERV1 -53 506 199 4236 59 17 0 chr10 114501467 114502008 -25814757 - L1PA6 LINE L1 0 6154 5605 351 241 28 19 chr10 114502015 114502123 -25814642 - MER89 LTR ERV1 -448 111 3 924 212 15 27 chr10 114502130 114502389 -25814376 + L1MB8 LINE L1 5921 6176 -2 1783 35 0 0 chr10 114502497 114502723 -25814042 + L1P1 LINE L1 4373 4598 -1548 2549 18 16 0 chr10 114502739 114503192 -25813573 + L1P1 LINE L1 5121 5578 -577 24 0 0 0 chr10 114503941 114503965 -25812800 + AT_rich Low_complexity Low_complexity 1 24 0 190 56 56 0 chr10 114504004 114504040 -25812725 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 232 264 64 79 chr10 114505169 114505309 -25811456 + MIR SINE MIR 119 256 -6 533 339 106 0 chr10 114505668 114505886 -25810879 - MIR SINE MIR -12 250 10 1459 193 23 30 chr10 114506282 114506587 -25810178 + AluJo SINE Alu 7 309 -3 198 0 0 0 chr10 114507206 114507228 -25809537 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 230 339 33 16 chr10 114507461 114507582 -25809183 + MER5A DNA MER1_type 8 130 -59 1075 236 25 16 chr10 114507813 114508197 -25808568 - MLT2D LTR ERVL -69 395 1 448 150 23 120 chr10 114508197 114508330 -25808435 + MLT1B LTR MaLR 132 251 -139 1033 192 38 116 chr10 114508533 114508929 -25807836 + MLT1A1 LTR MaLR 1 365 0 325 270 95 15 chr10 114509382 114509519 -25807246 - MIR SINE MIR -43 219 72 284 100 0 20 chr10 114511230 114511280 -25805485 + (GGGGA)n Simple_repeat Simple_repeat 3 51 0 2382 146 0 3 chr10 114511896 114512259 -25804506 + THE1B LTR MaLR 3 364 0 1594 225 80 17 chr10 114512506 114512981 -25803784 + MLT1D LTR MaLR 1 505 0 340 287 70 91 chr10 114513011 114513297 -25803468 - HAL1b LINE L1 -1 1347 1068 254 125 21 0 chr10 114513359 114513407 -25803358 + CT-rich Low_complexity Low_complexity 2 50 0 746 218 0 0 chr10 114513417 114513550 -25803215 - FLAM_C SINE Alu 0 133 1 465 301 36 30 chr10 114514112 114514278 -25802487 + MIR SINE MIR 84 250 -12 484 236 209 7 chr10 114514562 114514710 -25802055 + MIR SINE MIR 8 185 -77 2361 68 0 36 chr10 114514917 114515225 -25801540 + AluY SINE Alu 1 297 -14 318 320 39 19 chr10 114515249 114515352 -25801413 - L2 LINE L2 -21 3251 3147 384 264 0 0 chr10 114515797 114515884 -25800881 - MIR SINE MIR -110 152 66 264 290 99 38 chr10 114515935 114516066 -25800699 + MIR3 SINE MIR 40 178 -30 278 306 25 33 chr10 114516382 114516503 -25800262 + MIR SINE MIR 97 216 -46 27 29 0 0 chr10 114516592 114516626 -25800139 + AT_rich Low_complexity Low_complexity 1 34 0 219 365 0 19 chr10 114516750 114516854 -25799911 + MER5A DNA MER1_type 38 139 -50 2148 114 13 13 chr10 114516861 114517168 -25799597 - AluSq SINE Alu 0 313 7 533 339 106 0 chr10 114517564 114517782 -25798983 + MIR SINE MIR 10 250 -12 184 269 64 85 chr10 114518141 114518282 -25798483 - MIR SINE MIR -6 256 119 190 56 56 0 chr10 114519409 114519445 -25797320 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 24 0 0 0 chr10 114519484 114519508 -25797257 + AT_rich Low_complexity Low_complexity 1 24 0 2549 18 16 0 chr10 114520257 114520710 -25796055 - L1P1 LINE L1 -577 5578 5121 1783 35 0 0 chr10 114520726 114520952 -25795813 - L1P1 LINE L1 -1548 4598 4373 924 212 15 27 chr10 114521060 114521319 -25795446 - L1MB8 LINE L1 -2 6176 5921 351 241 28 19 chr10 114521326 114521434 -25795331 + MER89 LTR ERV1 3 111 -448 4236 59 17 0 chr10 114521441 114521982 -25794783 + L1PA6 LINE L1 5605 6154 0 1473 176 42 10 chr10 114521985 114522291 -25794474 + MER89 LTR ERV1 191 506 -53 1481 247 67 23 chr10 114522291 114522958 -25793807 - L1ME3A LINE L1 -260 5910 5195 34222 98 9 8 chr10 114523105 114529246 -25787519 + L1PA6 LINE L1 11 6153 -1 286 336 66 44 chr10 114529253 114529390 -25787375 + MIR3 SINE MIR 42 181 -27 24 53 0 0 chr10 114529449 114529487 -25787278 + AT_rich Low_complexity Low_complexity 1 38 0 427 310 38 27 chr10 114530566 114530750 -25786015 + MIR SINE MIR 45 230 -32 27 29 0 0 chr10 114532726 114532760 -25784005 + AT_rich Low_complexity Low_complexity 1 34 0 2444 151 29 5 chr10 114532912 114533330 -25783435 + MSTA LTR MaLR 1 428 0 7164 169 36 99 chr10 114533330 114534746 -25782019 + MSTA-int LTR MaLR 1 1287 -364 372 22 0 0 chr10 114534746 114534791 -25781974 + (TG)n Simple_repeat Simple_repeat 2 46 0 7164 169 36 99 chr10 114534791 114535135 -25781630 + MSTA-int LTR MaLR 1287 1651 0 2417 143 26 12 chr10 114535135 114535556 -25781209 + MSTA LTR MaLR 1 427 -1 285 75 0 0 chr10 114535789 114535829 -25780936 + (CA)n Simple_repeat Simple_repeat 2 41 0 212 0 36 0 chr10 114535831 114535859 -25780906 + (GA)n Simple_repeat Simple_repeat 1 29 0 3846 177 30 7 chr10 114536562 114537267 -25779498 + MER72 LTR ERV1 2 722 0 464 294 56 35 chr10 114537311 114537597 -25779168 + L1MC/D LINE L1 5416 5707 -2101 1763 86 8 23 chr10 114537616 114537873 -25778892 + AluY SINE Alu 55 307 -4 3276 162 23 13 chr10 114537907 114538519 -25778246 - LTR29 LTR ERV1 -4 618 1 4571 107 8 1 chr10 114538635 114539291 -25777474 - PABL_A LTR ERV1 0 660 1 2287 112 125 8 chr10 114539393 114539776 -25776989 - MSTA LTR MaLR 0 428 1 33 43 0 0 chr10 114539837 114539884 -25776881 + AT_rich Low_complexity Low_complexity 1 47 0 4637 125 5 66 chr10 114540136 114540966 -25775799 - MER4E LTR ERV1 0 779 1 3475 166 10 63 chr10 114541260 114541990 -25774775 - LTR8 LTR ERV1 0 691 1 205 133 0 44 chr10 114542063 114542108 -25774657 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 202 286 92 0 chr10 114542932 114543030 -25773735 - MIR SINE MIR -11 251 145 1738 220 50 44 chr10 114543447 114543538 -25773227 - L1MD2 LINE L1 -3 6356 6267 1411 220 73 48 chr10 114543538 114543992 -25772773 + MLT1C LTR MaLR 1 465 -2 1738 220 50 44 chr10 114543992 114544419 -25772346 - L1MD2 LINE L1 -92 6267 5835 615 288 2 1 chr10 114544446 114544663 -25772102 - L1 LINE L1 -1545 4601 4383 7210 50 0 0 chr10 114545711 114547135 -25769630 + L1PA4 LINE L1 4729 6152 -3 1524 196 26 81 chr10 114548025 114548484 -25768281 + MER31B LTR ERV1 4 437 -29 204 40 0 0 chr10 114548486 114548511 -25768254 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 611 331 16 0 chr10 114548645 114548829 -25767936 - MIR SINE MIR -73 189 3 1760 113 0 0 chr10 114548974 114549204 -25767561 - AluSx SINE Alu -22 290 61 270 258 53 68 chr10 114549772 114549904 -25766861 - MER5B DNA MER1_type -48 130 1 186 43 0 0 chr10 114549998 114550021 -25766744 + (TA)n Simple_repeat Simple_repeat 2 24 0 250 295 189 0 chr10 114550042 114550164 -25766601 + MIR3 SINE MIR 50 194 -14 1150 254 89 70 chr10 114550460 114550808 -25765957 - MLT1H1 LTR MaLR -5 550 187 2359 91 16 0 chr10 114550808 114551115 -25765650 - AluSx SINE Alu 0 312 1 1150 254 89 70 chr10 114551115 114551305 -25765460 - MLT1H1 LTR MaLR -368 187 2 295 281 65 92 chr10 114551363 114551580 -25765185 + MIR SINE MIR 50 260 -2 490 278 166 0 chr10 114552301 114552452 -25764313 + MER5A DNA MER1_type 13 188 -1 2962 106 81 20 chr10 114552659 114553168 -25763597 - L1MA1 LINE L1 0 6302 5763 1224 106 21 12 chr10 114553204 114553421 -25763344 + MLT2A2 LTR ERVL 293 453 0 552 269 30 0 chr10 114553423 114553557 -25763208 - MIR SINE MIR -37 225 88 2626 100 17 6 chr10 114554799 114555159 -25761606 - THE1B LTR MaLR 0 364 1 739 359 29 10 chr10 114555217 114555635 -25761130 - LTR16A LTR ERVL -8 442 17 341 308 51 0 chr10 114555842 114555959 -25760806 + L2 LINE L2 3191 3313 0 478 305 56 30 chr10 114556912 114557145 -25759620 + L2 LINE L2 2600 2838 -476 325 270 95 15 chr10 114559028 114559165 -25757600 + MIR SINE MIR 72 219 -43 1033 192 38 116 chr10 114559618 114560014 -25756751 - MLT1A1 LTR MaLR 0 365 1 330 188 23 120 chr10 114560216 114560349 -25756416 - MLT1B LTR MaLR -139 251 132 1075 236 25 16 chr10 114560349 114560733 -25756032 + MLT2D LTR ERVL 1 395 -69 230 339 33 16 chr10 114560964 114561085 -25755680 - MER5A DNA MER1_type -59 130 8 198 0 0 0 chr10 114561318 114561340 -25755425 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1434 206 23 26 chr10 114561959 114562269 -25754496 - AluJo SINE Alu -3 309 1 541 146 0 0 chr10 114563581 114563663 -25753102 - AluJ/FLAM SINE Alu -228 84 3 473 242 89 48 chr10 114564740 114564988 -25751777 - LTR16A1 LTR ERVL 0 457 200 485 295 40 14 chr10 114565246 114565459 -25751306 + MIR SINE MIR 45 262 0 33 0 0 0 chr10 114567117 114567150 -25749615 + AT_rich Low_complexity Low_complexity 1 33 0 1970 161 91 5 chr10 114567404 114567794 -25748971 + MSTB LTR MaLR 1 355 0 337 279 50 57 chr10 114568477 114568617 -25748148 + MLT1J2 LTR MaLR 267 405 -45 860 197 35 46 chr10 114568684 114568822 -25747943 - L1ME3A LINE L1 -4 6166 6031 2193 106 47 33 chr10 114568822 114569181 -25747584 - THE1B LTR MaLR 0 364 1 860 197 35 46 chr10 114569181 114569301 -25747464 - L1ME3A LINE L1 -139 6031 5911 225 264 0 99 chr10 114569772 114569816 -25746949 + MIR SINE MIR 7 39 -223 1398 234 33 17 chr10 114569816 114570175 -25746590 + MLT1A1 LTR MaLR 1 365 0 225 264 0 99 chr10 114570175 114570221 -25746544 + MIR SINE MIR 39 88 -174 353 397 27 8 chr10 114570359 114570621 -25746144 - L1ME3A LINE L1 -2054 5754 5488 270 190 76 13 chr10 114570639 114570718 -25746047 - L1MC5 LINE L1 -54 7907 7824 1883 249 72 56 chr10 114570744 114571291 -25745474 - L1ME1 LINE L1 -5 6161 5597 1462 181 11 11 chr10 114571291 114571561 -25745204 + AluSx SINE Alu 33 302 -10 1883 249 72 56 chr10 114571561 114571991 -25744774 - L1ME1 LINE L1 -569 5597 5176 1648 271 52 16 chr10 114572035 114572706 -25744059 - L1ME1 LINE L1 -55 6111 5417 267 172 58 58 chr10 114572775 114572862 -25743903 + MER88 LTR ERVL 79 165 -299 * 1255 266 50 28 chr10 114572788 114573246 -25743519 - MER74B LTR ERVL -74 548 81 361 248 43 7 chr10 114573262 114573403 -25743362 - L1ME1 LINE L1 -953 5406 5261 762 192 0 0 chr10 114573408 114573533 -25743232 + FLAM_C SINE Alu 6 130 -13 328 220 55 33 chr10 114573582 114573673 -25743092 + L1MC4 LINE L1 6611 6703 -1339 * 342 256 11 11 chr10 114573597 114573687 -25743078 - L1MC4 LINE L1 -1339 6703 6614 239 157 45 0 chr10 114573693 114573782 -25742983 + (TA)n Simple_repeat Simple_repeat 2 94 0 327 226 38 9 chr10 114573782 114573888 -25742877 - L1ME1 LINE L1 -904 5242 5134 4234 150 33 18 chr10 114573896 114574172 -25742593 - L1MA5A LINE L1 -4 6293 6022 1965 140 135 26 chr10 114574172 114574558 -25742207 - MSTA LTR MaLR 0 428 1 4234 150 33 18 chr10 114574558 114574629 -25742136 - L1MA5A LINE L1 -275 6022 5954 2137 138 0 0 chr10 114574629 114574920 -25741845 - AluSx SINE Alu -21 291 1 4234 150 33 18 chr10 114574920 114575396 -25741369 - L1MA5A LINE L1 -343 5954 5457 654 153 8 0 chr10 114575405 114575523 -25741242 - L1 LINE L1 -3788 3000 2882 6560 71 48 0 chr10 114575523 114576612 -25740153 - L1PA7 LINE L1 -2 6152 5056 534 93 0 0 chr10 114576612 114576687 -25740078 - U5 snRNA snRNA -41 75 1 6584 235 111 44 chr10 114576687 114577588 -25739177 - L1 LINE L1 -3902 2886 2047 1776 102 0 8 chr10 114577588 114577846 -25738919 + AluY SINE Alu 50 305 0 6584 235 111 44 chr10 114577846 114579613 -25737152 - L1 LINE L1 -4741 2047 58 1663 228 98 75 chr10 114579609 114580623 -25736142 - L1ME1 LINE L1 -998 5148 4112 * 678 338 39 4 chr10 114581560 114581791 -25734974 - MIR SINE MIR -22 240 2 636 14 0 0 chr10 114583300 114583373 -25733392 + (GGAA)n Simple_repeat Simple_repeat 1 73 0 278 328 59 25 chr10 114583696 114583815 -25732950 - L2 LINE L2 0 3272 3150 933 298 79 47 chr10 114583927 114584059 -25732706 + L2 LINE L2 2668 2794 -519 1970 167 0 0 chr10 114584059 114584364 -25732401 + AluSx SINE Alu 3 307 -5 933 298 79 47 chr10 114584364 114584862 -25731903 + L2 LINE L2 2794 3313 0 3995 172 83 8 chr10 114584935 114585703 -25731062 - LTR1B LTR ERV1 0 826 1 18675 96 26 9 chr10 114586063 114589344 -25727421 - L1PA7 LINE L1 -4 6150 2812 2255 110 0 3 chr10 114589344 114589645 -25727120 - AluY SINE Alu -11 300 1 18675 96 26 9 chr10 114589645 114589948 -25726817 - L1PA7 LINE L1 -3342 2812 2516 2307 111 0 11 chr10 114589950 114590318 -25726447 + L1PA7 LINE L1 2160 2523 -3623 438 329 83 21 chr10 114590407 114590647 -25726118 + MIR SINE MIR 1 255 -7 * 578 306 64 18 chr10 114590643 114590862 -25725903 - MIR SINE MIR -2 260 32 256 254 169 17 chr10 114591909 114592027 -25724738 - MIR SINE MIR -13 249 114 25 51 0 0 chr10 114592055 114592094 -25724671 + AT_rich Low_complexity Low_complexity 1 39 0 2151 81 27 0 chr10 114593228 114593523 -25723242 + L1PA13 LINE L1 5853 6155 -8 289 253 89 0 chr10 114594294 114594373 -25722392 - MIR3 SINE MIR -30 178 93 597 274 70 33 chr10 114594382 114594623 -25722142 + REP3 LTR ERV 8 257 -305 411 326 118 11 chr10 114594738 114594916 -25721849 + L3 LINE CR1 1355 1551 -26 248 202 0 0 chr10 114595110 114595168 -25721597 + MIR SINE MIR 102 158 -65 355 308 15 8 chr10 114596252 114596385 -25720380 + MIR SINE MIR 14 147 -115 1613 196 0 48 chr10 114597042 114597354 -25719411 + AluJo SINE Alu 1 297 -15 35 71 0 0 chr10 114597355 114597425 -25719340 + AT_rich Low_complexity Low_complexity 1 70 0 276 292 9 53 chr10 114597815 114597928 -25718837 - MER77 LTR ERV1 -419 186 79 313 344 83 13 chr10 114598056 114598213 -25718552 + MER5B DNA MER1_type 11 178 0 228 263 0 66 chr10 114598529 114598605 -25718160 - MIR SINE MIR -66 142 72 2295 66 6 59 chr10 114599539 114599859 -25716906 - AluY SINE Alu -8 303 1 532 263 55 55 chr10 114600731 114600948 -25715817 + L2 LINE L2 3088 3304 -9 804 247 67 14 chr10 114601098 114601321 -25715444 - MIR SINE MIR -3 259 25 2178 122 3 0 chr10 114601416 114601711 -25715054 - AluSg SINE Alu -14 296 1 24 77 0 0 chr10 114602281 114602333 -25714432 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr10 114603452 114603473 -25713292 + AT_rich Low_complexity Low_complexity 1 21 0 180 331 52 52 chr10 114603745 114603881 -25712884 - L2 LINE L2 0 3272 3137 285 282 82 9 chr10 114604000 114604110 -25712655 - MIR SINE MIR -67 195 78 291 157 102 0 chr10 114604237 114604313 -25712452 - MLT1J2 LTR MaLR -8 438 354 449 261 11 72 chr10 114604457 114604637 -25712128 - MLT1J2 LTR MaLR -279 171 3 418 197 17 0 chr10 114604646 114604763 -25712002 + (TA)n Simple_repeat Simple_repeat 2 120 0 2105 131 44 19 chr10 114605570 114605936 -25710829 - THE1C LTR MaLR 0 375 1 193 260 154 48 chr10 114606169 114606273 -25710492 - MIR SINE MIR -1 261 147 3030 158 16 8 chr10 114606364 114606485 -25710280 - MER41E LTR ERV1 0 512 393 2273 132 0 0 chr10 114606485 114606795 -25709970 + AluSg SINE Alu 1 310 0 3030 158 16 8 chr10 114606795 114607181 -25709584 - MER41E LTR ERV1 -119 393 1 255 327 13 47 chr10 114607500 114607650 -25709115 - MLT1K LTR MaLR -318 270 126 397 240 41 94 chr10 114607710 114607881 -25708884 - MIR SINE MIR -97 165 4 223 287 85 32 chr10 114608714 114608808 -25707957 - MER5A DNA MER1_type -8 170 72 232 217 0 0 chr10 114608919 114608965 -25707800 - LTR53 LTR ERVL -2 517 472 207 114 0 0 chr10 114609206 114609241 -25707524 + (TA)n Simple_repeat Simple_repeat 1 35 0 31 44 0 0 chr10 114609261 114609306 -25707459 + AT_rich Low_complexity Low_complexity 1 45 0 1866 121 18 7 chr10 114609551 114609823 -25706942 + AluSc SINE Alu 24 298 -11 278 205 72 0 chr10 114610398 114610481 -25706284 - MLT1J1 LTR MaLR -5 441 353 210 241 19 0 chr10 114611398 114611452 -25705313 + (CAT)n Simple_repeat Simple_repeat 1 55 0 267 287 0 40 chr10 114611653 114611754 -25705011 + (TAGG)n Simple_repeat Simple_repeat 2 98 0 213 222 0 22 chr10 114612481 114612526 -25704239 + (TAGG)n Simple_repeat Simple_repeat 2 45 0 1896 103 7 11 chr10 114612634 114612905 -25703860 + AluSc SINE Alu 40 309 0 253 236 0 0 chr10 114613049 114613104 -25703661 + MLT1D LTR MaLR 1 55 -450 40290 38 24 1 chr10 114615305 114621319 -25695446 + L1PA2 LINE L1 2 6155 0 1462 179 65 31 chr10 114621663 114621954 -25694811 - AluJo SINE Alu -11 301 1 274 248 120 23 chr10 114622391 114622524 -25694241 + MIR SINE MIR 117 262 0 206 238 0 0 chr10 114622571 114622613 -25694152 + (CA)n Simple_repeat Simple_repeat 2 43 0 814 253 51 63 chr10 114622713 114623128 -25693637 - MER92A LTR ERV1 0 412 3 2014 123 55 30 chr10 114623610 114623976 -25692789 - THE1C LTR MaLR 0 375 1 257 309 186 29 chr10 114624011 114624215 -25692550 - MIR SINE MIR -15 247 12 325 309 30 42 chr10 114625018 114625183 -25691582 - MIR SINE MIR -10 252 90 24 67 0 0 chr10 114625183 114625228 -25691537 + AT_rich Low_complexity Low_complexity 1 45 0 463 135 218 118 chr10 114625534 114625704 -25691061 + MER5A DNA MER1_type 1 187 -2 312 294 73 43 chr10 114626600 114626751 -25690014 + L2 LINE L2 2916 3069 -203 348 145 116 0 chr10 114626909 114626978 -25689787 - L1MDa LINE L1 -6450 90 14 1066 171 5 42 chr10 114627134 114627222 -25689543 - MER3 DNA MER1_type 0 209 119 2048 129 33 3 chr10 114627222 114627524 -25689241 + AluSp SINE Alu 1 311 -2 1066 171 5 42 chr10 114627524 114627651 -25689114 - MER3 DNA MER1_type -90 119 2 27 29 0 0 chr10 114627904 114627938 -25688827 + AT_rich Low_complexity Low_complexity 1 34 0 418 171 80 34 chr10 114627977 114628065 -25688700 + FRAM SINE Alu 65 156 -20 255 265 41 41 chr10 114628343 114628441 -25688324 - MIR SINE MIR -58 204 107 1320 211 42 63 chr10 114628470 114628943 -25687822 + LTR37B LTR ERV1 6 468 0 344 308 93 23 chr10 114629187 114629359 -25687406 - MIR3 SINE MIR -2 206 23 326 272 29 0 chr10 114629682 114629785 -25686980 + MIR SINE MIR 117 222 -40 317 286 103 18 chr10 114630911 114631069 -25685696 + MIR SINE MIR 3 169 -67 561 148 0 10 chr10 114631322 114631423 -25685342 + U6 snRNA snRNA 1 100 -7 24 0 0 0 chr10 114631470 114631494 -25685271 + AT_rich Low_complexity Low_complexity 1 24 0 212 411 16 0 chr10 114631956 114632080 -25684685 - L3 LINE CR1 -86 1491 1366 890 140 30 18 chr10 114632200 114632413 -25684352 + GA-rich Low_complexity Low_complexity 1 215 0 206 327 0 26 chr10 114632381 114632494 -25684271 + G-rich Low_complexity Low_complexity 3 112 0 * 8729 22 4 0 chr10 114633010 114634217 -25682548 + L1P1 LINE L1 4299 5508 -647 3366 61 18 0 chr10 114634525 114634967 -25681798 - L1PA13 LINE L1 -4 6159 5710 215 330 68 23 chr10 114635021 114635109 -25681656 + L2 LINE L2 3145 3236 -36 2332 96 7 0 chr10 114635631 114635933 -25680832 - AluSp SINE Alu -8 305 2 354 380 73 17 chr10 114637426 114637613 -25679152 + MIR3 SINE MIR 8 196 -12 436 292 73 0 chr10 114637883 114638020 -25678745 - MIR SINE MIR -45 217 71 206 122 0 61 chr10 114638075 114638124 -25678641 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 2277 206 58 34 chr10 114640035 114640690 -25676075 + L1MC3 LINE L1 5752 6422 -1363 531 0 0 0 chr10 114641233 114641292 -25675473 + (TA)n Simple_repeat Simple_repeat 1 59 0 6116 93 18 26 chr10 114641298 114642464 -25674301 - L1PA12 LINE L1 0 6168 5018 2494 69 0 3 chr10 114642464 114642770 -25673995 - AluY SINE Alu -6 305 1 6116 93 18 26 chr10 114642770 114643043 -25673722 - L1PA12 LINE L1 -1150 5018 4744 364 356 82 0 chr10 114643164 114643372 -25673393 + L2 LINE L2 877 1101 -2213 1836 303 26 9 chr10 114643759 114644662 -25672103 + HERV16 LTR ERVL 1665 2629 -2367 2100 148 35 15 chr10 114644709 114645107 -25671658 - MSTA LTR MaLR 0 428 23 2211 124 7 0 chr10 114645194 114645493 -25671272 - AluSx SINE Alu -11 301 1 25 95 0 0 chr10 114646481 114646555 -25670210 + AT_rich Low_complexity Low_complexity 1 74 0 468 299 86 18 chr10 114646566 114646904 -25669861 + L1ME4a LINE L1 5522 5882 -239 4213 90 0 0 chr10 114647383 114647937 -25668828 - MER41A LTR ERV1 0 554 1 431 273 53 38 chr10 114649687 114649819 -25666946 + MIR3 SINE MIR 22 155 -53 210 353 29 29 chr10 114650208 114650310 -25666455 + MIR3 SINE MIR 58 159 -49 284 281 0 0 chr10 114650419 114650515 -25666250 - MER103 DNA DNA -67 99 4 225 65 0 0 chr10 114650820 114650851 -25665914 + (CA)n Simple_repeat Simple_repeat 2 32 0 2447 137 0 3 chr10 114651261 114651626 -25665139 - THE1B LTR MaLR 0 364 1 10602 110 12 29 chr10 114651626 114653234 -25663531 - THE1B-int LTR MaLR 0 1580 1 2525 132 3 0 chr10 114653234 114653597 -25663168 - THE1B LTR MaLR 0 364 1 309 284 45 45 chr10 114654194 114654328 -25662437 + L2 LINE L2 3134 3267 -5 2784 91 107 5 chr10 114654643 114655084 -25661681 + LTR19A LTR ERV1 1 486 0 488 356 35 3 chr10 114655139 114655451 -25661314 - L1ME3A LINE L1 -307 5863 5542 386 206 127 36 chr10 114656343 114656508 -25660257 - L1ME3A LINE L1 -16 6154 5975 275 376 27 13 chr10 114656548 114656697 -25660068 - MIR3 SINE MIR -54 154 4 387 192 0 0 chr10 114656910 114656988 -25659777 + CT-rich Low_complexity Low_complexity 1 78 0 280 335 24 54 chr10 114657308 114657475 -25659290 + MIR SINE MIR 3 164 -98 316 301 12 0 chr10 114657980 114658063 -25658702 + MIR SINE MIR 56 139 -123 241 319 29 0 chr10 114658733 114658802 -25657963 - L2 LINE L2 -59 3213 3143 189 320 52 0 chr10 114660578 114660675 -25656090 + L2 LINE L2 2552 2653 -661 4262 202 21 34 chr10 114660699 114661694 -25655071 - L1MB5 LINE L1 -8 6402 5396 2066 120 10 3 chr10 114661694 114661986 -25654779 - AluSg SINE Alu -16 294 1 4262 202 21 34 chr10 114661986 114662016 -25654749 - L1MB5 LINE L1 -1014 5396 5367 1465 211 16 29 chr10 114662016 114662328 -25654437 - AluJo SINE Alu -4 308 1 4262 202 21 34 chr10 114662328 114662865 -25653900 - L1MB5 LINE L1 -1043 5367 4866 408 183 0 0 chr10 114662866 114662937 -25653828 + L1PA15-16 LINE L1 108 178 -6671 1936 231 43 19 chr10 114662942 114663586 -25653179 - L1MB5 LINE L1 -3339 3043 2384 1465 138 27 8 chr10 114663619 114663880 -25652885 - L1PB1 LINE L1 -8 6143 5878 735 217 38 33 chr10 114663880 114664120 -25652645 - L1MB5 LINE L1 -4881 1503 1263 197 95 0 24 chr10 114664198 114664240 -25652525 + (GA)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr10 114664245 114664265 -25652500 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5367 125 39 2 chr10 114664265 114665437 -25651328 - L1PA15 LINE L1 -11 6154 4947 339 344 66 58 chr10 114665464 114665857 -25650908 + L2 LINE L2 2918 3313 0 934 283 113 31 chr10 114666182 114666695 -25650070 + LTR67 LTR ERVL 3 557 0 732 219 91 0 chr10 114666720 114666907 -25649858 + MER58A DNA MER1_type 20 223 -1 225 337 175 45 chr10 114667216 114667264 -25649501 - L3 LINE CR1 -6 1571 1531 2700 17 3 0 chr10 114667264 114667566 -25649199 + AluY SINE Alu 1 303 -8 225 337 175 45 chr10 114667566 114667826 -25648939 - L3 LINE CR1 -46 1531 1223 196 256 70 105 chr10 114668323 114668495 -25648270 + MIR SINE MIR 66 231 -31 287 262 146 19 chr10 114669015 114669118 -25647647 + MIR SINE MIR 76 191 -71 180 111 0 0 chr10 114669118 114669145 -25647620 + (A)n Simple_repeat Simple_repeat 1 27 0 570 294 21 46 chr10 114669227 114669421 -25647344 + MIR SINE MIR 73 261 -1 2054 133 3 3 chr10 114669593 114669895 -25646870 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr10 114670742 114670767 -25645998 + (T)n Simple_repeat Simple_repeat 1 25 0 345 330 40 40 chr10 114671154 114671409 -25645356 - L2 LINE L2 -256 3016 2764 680 216 0 41 chr10 114671421 114671592 -25645173 + L1MB5 LINE L1 6001 6164 -10 30 21 0 21 chr10 114671600 114671630 -25645135 + AT_rich Low_complexity Low_complexity 1 31 -16 1989 125 7 7 chr10 114671630 114671917 -25644848 + AluSq SINE Alu 1 287 -26 30 21 0 21 chr10 114671917 114671934 -25644831 + AT_rich Low_complexity Low_complexity 31 47 0 1739 131 26 16 chr10 114672093 114672398 -25644367 - Tigger3(Golem) DNA MER2_type 0 3029 2722 349 200 67 0 chr10 114672396 114672471 -25644294 - Tigger3(Golem) DNA MER2_type -2947 82 3 * 267 133 0 0 chr10 114672491 114672536 -25644229 + (TA)n Simple_repeat Simple_repeat 1 45 0 331 293 147 5 chr10 114672578 114672776 -25643989 - L1MC4a LINE L1 -1876 5932 5707 337 239 69 54 chr10 114673062 114673192 -25643573 - HAL1b LINE L1 -488 860 729 482 289 58 40 chr10 114673297 114673622 -25643143 - HAL1b LINE L1 -752 596 266 1467 209 39 0 chr10 114673745 114674028 -25642737 - AluJo SINE Alu -16 296 3 22 0 0 0 chr10 114674279 114674301 -25642464 + AT_rich Low_complexity Low_complexity 1 22 0 2073 235 62 43 chr10 114675070 114676328 -25640437 - L1ME1 LINE L1 -6 6229 4950 370 223 19 29 chr10 114676371 114676474 -25640291 - L1ME1 LINE L1 -6259 137 36 257 310 69 0 chr10 114676529 114676616 -25640149 - MIR SINE MIR -104 158 66 22 0 0 0 chr10 114676705 114676727 -25640038 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 114677034 114677057 -25639708 + AT_rich Low_complexity Low_complexity 1 23 0 987 164 0 0 chr10 114677518 114677696 -25639069 - AluSg/x SINE Alu 0 310 133 280 322 133 44 chr10 114677730 114678296 -25638469 + L2 LINE L2 1734 2349 -965 322 327 85 88 chr10 114678408 114678830 -25637935 + L2 LINE L2 2804 3224 -48 603 276 46 11 chr10 114679533 114679707 -25637058 - MER45C DNA AcHobo -773 180 1 2090 157 37 3 chr10 114681204 114681581 -25635184 - MLT1B LTR MaLR 0 390 1 201 388 0 0 chr10 114682350 114682417 -25634348 + L2 LINE L2 3137 3203 -69 2780 7 0 3 chr10 114682565 114682872 -25633893 - AluYa5 SINE Alu -5 306 1 2234 117 0 10 chr10 114683220 114683529 -25633236 - AluSq SINE Alu -7 306 1 869 203 48 5 chr10 114683697 114683884 -25632881 + MER58A DNA MER1_type 24 218 -6 347 332 59 79 chr10 114683917 114684018 -25632747 + L2 LINE L2 2370 2471 -843 345 222 33 59 chr10 114684018 114684171 -25632594 - L1MA8 LINE L1 -111 6180 6032 715 147 22 7 chr10 114684036 114684172 -25632593 - L1MB1 LINE L1 0 6168 6031 347 332 59 79 chr10 114684171 114684459 -25632306 + L2 LINE L2 2471 2768 -546 2178 97 54 31 chr10 114684500 114684851 -25631914 + THE1B LTR MaLR 6 364 0 11326 97 21 1 chr10 114684852 114686399 -25630366 + THE1B-int LTR MaLR 2 1580 0 2198 115 72 23 chr10 114686399 114686746 -25630019 + THE1B LTR MaLR 1 364 0 212 294 9 64 chr10 114686931 114687040 -25629725 + MIR SINE MIR 124 226 -36 1663 177 72 0 chr10 114687114 114687391 -25629374 + AluJb SINE Alu 2 298 -14 239 339 92 9 chr10 114687567 114687676 -25629089 + L2 LINE L2 3138 3255 -17 312 27 0 0 chr10 114689251 114689288 -25627477 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr10 114689456 114689484 -25627281 + AT_rich Low_complexity Low_complexity 1 28 0 767 279 222 11 chr10 114689498 114689949 -25626816 + LTR50 LTR ERVL 12 557 -238 233 254 162 14 chr10 114690069 114690211 -25626554 + LTR50 LTR ERVL 632 794 -1 539 315 14 22 chr10 114690615 114690837 -25625928 + MLT1K LTR MaLR 207 426 -162 1663 143 78 13 chr10 114691276 114691797 -25624968 - MER51A LTR ERV1 -9 625 1 2312 147 5 3 chr10 114691799 114692186 -25624579 - MER51A-int LTR ERV1 -1 7815 7428 575 138 21 0 chr10 114692187 114692281 -25624484 - LTR54B LTR ERV1 -400 98 3 2305 110 3 0 chr10 114692281 114692609 -25624156 - MER51A-int LTR ERV1 -389 7148 6820 1574 81 69 29 chr10 114692607 114692853 -25623912 - MER51-int LTR ERV1 -7559 257 2 * 2852 199 26 3 chr10 114693053 114693660 -25623105 + MER67C LTR ERV1 1 621 -89 4788 187 29 5 chr10 114693883 114694944 -25621821 + L1MA4A LINE L1 3972 5058 -1088 2123 175 66 120 chr10 114694963 114695704 -25621061 + LTR8A LTR ERV1 27 727 0 1797 110 9 57 chr10 114695706 114696215 -25620550 + L1MA4A LINE L1 5068 5563 -740 1452 102 133 31 chr10 114696215 114696508 -25620257 - LTR23 LTR ERV1 -112 325 3 2070 110 37 21 chr10 114696510 114696834 -25619931 + L1MA4A LINE L1 5648 5980 -323 4913 96 33 13 chr10 114696834 114697585 -25619180 - MER4E LTR ERV1 0 766 1 2070 110 37 21 chr10 114697585 114697641 -25619124 + L1MA4A LINE L1 5980 6034 -269 3458 75 10 4 chr10 114697641 114698131 -25618634 - LTR6B LTR ERV1 0 558 66 1552 118 4 4 chr10 114698154 114698416 -25618349 + L1MA4A LINE L1 6031 6292 -11 25 0 0 0 chr10 114699166 114699191 -25617574 + AT_rich Low_complexity Low_complexity 1 25 0 1426 153 44 51 chr10 114699567 114699862 -25616903 - MER4A LTR ERV1 0 664 372 249 89 22 22 chr10 114699910 114699955 -25616810 - MER4A LTR ERV1 -566 98 54 260 265 42 66 chr10 114700186 114700352 -25616413 + HAL1 LINE L1 2237 2398 -109 374 339 0 0 chr10 114700924 114701036 -25615729 - L3 LINE CR1 -119 1458 1347 1362 258 73 45 chr10 114701083 114701396 -25615369 + L1ME3A LINE L1 4795 5098 -1072 2413 90 3 0 chr10 114701396 114701707 -25615058 + AluSq SINE Alu 1 312 -1 1362 258 73 45 chr10 114701707 114702552 -25614213 + L1ME3A LINE L1 5098 5986 -184 2719 50 17 102 chr10 114702586 114703047 -25613718 - MLT2A1 LTR ERVL -22 422 1 17324 69 34 1 chr10 114703047 114705395 -25611370 - HERVL-A1 LTR ERVL 0 5654 3230 265 289 36 0 chr10 114705734 114705817 -25610948 + MIR SINE MIR 63 148 -60 293 247 0 25 chr10 114706391 114706472 -25610293 + MLT1L LTR MaLR 1 79 -536 2279 149 70 12 chr10 114707328 114707730 -25609035 - MSTB LTR MaLR -1 425 1 374 0 22 0 chr10 114707980 114708026 -25608739 + (CA)n Simple_repeat Simple_repeat 2 48 0 267 349 12 12 chr10 114709007 114709090 -25607675 + MIR SINE MIR 25 107 -155 2571 3 0 0 chr10 114709110 114709409 -25607356 - L1HS LINE L1 0 6155 5857 237 139 0 0 chr10 114709964 114710007 -25606758 + (T)n Simple_repeat Simple_repeat 1 43 0 261 217 57 28 chr10 114710115 114710221 -25606544 - L1ME4a LINE L1 -12 6109 6001 3354 204 72 24 chr10 114710322 114711184 -25605581 - L1MD1 LINE L1 -1 6635 5733 * 8029 198 106 60 chr10 114711172 114711716 -25605049 - L1MD1 LINE L1 -3894 2646 2128 422 36 18 0 chr10 114711716 114711772 -25604993 + (TA)n Simple_repeat Simple_repeat 1 57 0 8029 198 106 60 chr10 114711772 114713847 -25602918 - L1MD1 LINE L1 -4412 2128 16 582 235 26 26 chr10 114715809 114715962 -25600803 + MIR SINE MIR 5 157 -105 442 300 11 20 chr10 114715973 114716148 -25600617 - MLT2E LTR ERVL -454 174 1 3341 225 36 10 chr10 114716360 114717172 -25599593 + HERVL74 LTR ERVL 1251 2083 -3602 330 26 0 0 chr10 114717971 114718010 -25598755 + (CA)n Simple_repeat Simple_repeat 2 40 0 366 355 0 0 chr10 114718969 114719090 -25597675 - L2 LINE L2 -24 3289 3169 1993 97 13 44 chr10 114719181 114719479 -25597286 - AluSc SINE Alu -20 289 1 30 0 0 0 chr10 114719603 114719633 -25597132 + AT_rich Low_complexity Low_complexity 1 30 0 495 335 40 24 chr10 114719730 114719981 -25596784 - MIR SINE MIR -2 260 6 291 239 92 106 chr10 114720611 114720753 -25596012 + MIR SINE MIR 59 198 -64 24 53 0 0 chr10 114721188 114721226 -25595539 + AT_rich Low_complexity Low_complexity 1 38 0 1045 160 46 21 chr10 114721432 114721658 -25595107 - L1MA6 LINE L1 -126 6174 5940 732 105 38 8 chr10 114721658 114721787 -25594978 + L1MA6 LINE L1 6162 6298 -2 1045 160 46 21 chr10 114721787 114721798 -25594967 - L1MA6 LINE L1 -360 5940 5931 585 244 17 0 chr10 114721919 114722099 -25594666 + MER53 DNA DNA 5 187 -2 185 0 40 0 chr10 114722729 114722754 -25594011 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2148 82 31 14 chr10 114722770 114723062 -25593703 - AluY SINE Alu -14 297 1 1113 99 7 0 chr10 114723745 114723897 -25592868 - AluSp/q SINE Alu -4 309 157 378 352 34 11 chr10 114724844 114725020 -25591745 - MIR SINE MIR -76 186 7 1643 296 74 38 chr10 114725210 114726767 -25589998 + L1ME LINE L1 20 1667 -4594 12862 76 4 1 chr10 114726773 114728600 -25588165 - L1P LINE L1 -774 5398 3560 9677 152 11 28 chr10 114728591 114730392 -25586373 - L1P LINE L1 -4365 1781 11 * 491 340 92 35 chr10 114731186 114731909 -25584856 - L2 LINE L2 -222 3050 2281 1394 220 2 68 chr10 114732423 114732823 -25583942 + MLT1A2 LTR MaLR 1 374 0 2903 85 8 2 chr10 114733311 114733711 -25583054 + L1PA8 LINE L1 5771 6172 0 2083 149 10 0 chr10 114735301 114735651 -25581114 - AluSx SINE Alu 0 353 1 467 319 97 9 chr10 114735947 114736173 -25580592 - MIR SINE MIR -14 248 3 396 271 33 0 chr10 114736634 114736756 -25580009 - LTR16C LTR ERVL 0 491 366 2320 89 0 0 chr10 114737117 114737410 -25579355 - AluY SINE Alu -17 294 2 2546 103 24 22 chr10 114737501 114737910 -25578855 - L1MA1 LINE L1 -9 6293 5884 280 322 186 11 chr10 114738133 114738316 -25578449 + MIR SINE MIR 7 221 -41 433 255 18 13 chr10 114738868 114739032 -25577733 - L1ME1 LINE L1 -5 6161 5987 1396 229 145 35 chr10 114739064 114740177 -25576588 - L1ME1 LINE L1 -239 5927 4696 7246 199 31 21 chr10 114740350 114743265 -25573500 - L1PA16 LINE L1 -2 6164 3223 1756 197 63 7 chr10 114743267 114743728 -25573037 - L1MA5 LINE L1 0 6300 5814 * 9345 202 12 33 chr10 114743719 114744309 -25572456 - L1PA16 LINE L1 0 6166 5565 2024 119 24 10 chr10 114744309 114744604 -25572161 + AluY SINE Alu 1 299 -12 9345 202 12 33 chr10 114744604 114747598 -25569167 - L1PA16 LINE L1 -601 5565 2643 557 275 59 3 chr10 114747680 114747967 -25568798 - L1MEc LINE L1 -5352 1044 742 1766 156 10 24 chr10 114747981 114748269 -25568496 + AluJo SINE Alu 3 286 -26 233 146 21 0 chr10 114748269 114748317 -25568448 + (TA)n Simple_repeat Simple_repeat 1 49 0 31 76 0 0 chr10 114748340 114748406 -25568359 + AT_rich Low_complexity Low_complexity 1 66 0 234 189 19 0 chr10 114750030 114750108 -25566657 + CT-rich Low_complexity Low_complexity 1 79 0 26 30 0 0 chr10 114751637 114751670 -25565095 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 114752075 114752098 -25564667 + AT_rich Low_complexity Low_complexity 1 23 0 270 81 0 0 chr10 114752126 114752163 -25564602 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 196 128 13 51 chr10 114752558 114752636 -25564129 + (TATAA)n Simple_repeat Simple_repeat 2 76 0 623 257 55 11 chr10 114752965 114753148 -25563617 - MIR SINE MIR -63 199 9 209 281 236 0 chr10 114753599 114753688 -25563077 - MER91A DNA MER1_type 0 196 87 255 331 204 14 chr10 114753689 114753831 -25562934 - MER91A DNA MER1_type -25 171 3 274 220 16 141 chr10 114754285 114754476 -25562289 + L1MB7 LINE L1 6018 6184 0 195 371 29 43 chr10 114754612 114754752 -25562013 - L2 LINE L2 -9 3263 3126 4357 147 3 74 chr10 114754756 114755076 -25561689 - L1P LINE L1 -1907 4239 3898 2536 60 0 19 chr10 114755076 114755393 -25561372 - AluY SINE Alu 0 311 1 1719 178 11 3 chr10 114755396 114755682 -25561083 - AluJb SINE Alu -20 292 5 4357 147 3 74 chr10 114755682 114756294 -25560471 - L1P LINE L1 -2250 3896 3369 * 5368 167 12 2 chr10 114756289 114757887 -25558878 + L1PA13 LINE L1 4220 5830 -331 37959 71 8 7 chr10 114757887 114764034 -25552731 + L1PA5 LINE L1 2 6154 0 1995 142 0 0 chr10 114764029 114764359 -25552406 + L1PA13 LINE L1 5814 6143 -20 * 276 244 24 24 chr10 114764795 114764877 -25551888 - MIR SINE MIR -122 140 59 2137 154 19 0 chr10 114765180 114765550 -25551215 + Tigger2 DNA MER2_type 2342 2718 0 248 145 0 92 chr10 114766236 114766312 -25550453 + (TTA)n Simple_repeat Simple_repeat 2 70 0 529 307 105 22 chr10 114767374 114767602 -25549163 - MIR SINE MIR -1 261 15 189 244 171 89 chr10 114767787 114767910 -25548855 - MIR SINE MIR -98 164 32 697 263 116 0 chr10 114769002 114769192 -25547573 + MIR SINE MIR 51 262 0 285 98 0 0 chr10 114770220 114770261 -25546504 + (TCC)n Simple_repeat Simple_repeat 1 41 0 2367 75 0 28 chr10 114770606 114770925 -25545840 + AluY SINE Alu 1 310 -1 1343 233 111 9 chr10 114771016 114771482 -25545283 - L1MC4a LINE L1 -802 7006 6500 213 267 89 44 chr10 114771483 114771573 -25545192 + MIR SINE MIR 95 188 -74 189 74 0 0 chr10 114772875 114772902 -25543863 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 288 322 168 0 chr10 114773359 114773502 -25543263 + MIR SINE MIR 53 219 -43 1585 114 14 79 chr10 114773649 114774009 -25542756 + MER4A LTR ERV1 270 664 0 2514 119 29 43 chr10 114774201 114774466 -25542299 + MER4E LTR ERV1 1 268 -498 2366 110 0 3 chr10 114774466 114774774 -25541991 - AluSg1 SINE Alu -2 307 1 2514 119 29 43 chr10 114774774 114775115 -25541650 + MER4E LTR ERV1 268 766 0 367 333 40 7 chr10 114775366 114775516 -25541249 + MIR SINE MIR 92 246 -16 1740 135 3 0 chr10 114775677 114775974 -25540791 + L1MA4 LINE L1 5999 6296 -4 22 35 0 0 chr10 114776066 114776095 -25540670 + AT_rich Low_complexity Low_complexity 1 29 0 766 137 14 0 chr10 114777250 114777396 -25539369 + GA-rich Low_complexity Low_complexity 3 150 0 1989 215 105 30 chr10 114778107 114778612 -25538153 + MER50 LTR ERV1 10 580 -154 2509 69 0 0 chr10 114778612 114778918 -25537847 - AluY SINE Alu -5 306 1 1989 215 105 30 chr10 114778918 114779086 -25537679 + MER50 LTR ERV1 580 734 0 240 187 11 22 chr10 114779308 114779399 -25537366 + GA-rich Low_complexity Low_complexity 3 92 0 409 241 56 15 chr10 114779549 114779744 -25537021 - HAL1b LINE L1 -155 1193 991 523 200 152 0 chr10 114781178 114781303 -25535462 - MIR SINE MIR -91 171 28 329 164 30 15 chr10 114781783 114781850 -25534915 + MIR SINE MIR 77 144 -118 2592 145 37 2 chr10 114781902 114782309 -25534456 - MSTB LTR MaLR -4 422 2 189 341 30 22 chr10 114782589 114782724 -25534041 - MER5A DNA MER1_type -53 136 1 746 196 51 0 chr10 114783302 114783440 -25533325 + FRAM SINE Alu 4 148 -18 24295 145 12 15 chr10 114783809 114789947 -25526818 + L1PA8A LINE L1 2 6167 -279 463 122 95 0 chr10 114789947 114790021 -25526744 + AluSg/x SINE Alu 214 294 -16 28 0 0 0 chr10 114791020 114791048 -25525717 + AT_rich Low_complexity Low_complexity 1 28 0 565 335 30 0 chr10 114791595 114791792 -25524973 + MIR SINE MIR 55 257 -5 1276 205 123 36 chr10 114792606 114793054 -25523711 + L1MB7 LINE L1 5698 6184 0 959 149 0 7 chr10 114794933 114795087 -25521678 + MLT2A1 LTR ERVL 223 375 -69 26 0 0 0 chr10 114795128 114795154 -25521611 + AT_rich Low_complexity Low_complexity 1 26 0 241 319 29 0 chr10 114796933 114797002 -25519763 + L2 LINE L2 3143 3213 -59 275 325 12 0 chr10 114797672 114797755 -25519010 - MIR SINE MIR -123 139 56 235 353 26 52 chr10 114798276 114798429 -25518336 - MIR SINE MIR -111 151 3 378 214 0 0 chr10 114798749 114798833 -25517932 + GA-rich Low_complexity Low_complexity 1 84 0 275 376 27 13 chr10 114799046 114799195 -25517570 + MIR3 SINE MIR 4 154 -54 386 206 127 36 chr10 114799235 114799400 -25517365 + L1ME3A LINE L1 5975 6154 -16 528 355 16 3 chr10 114800292 114800610 -25516155 + L1ME3A LINE L1 5542 5863 -307 2817 86 107 5 chr10 114800665 114801106 -25515659 - LTR19A LTR ERV1 0 486 1 285 284 45 45 chr10 114801421 114801555 -25515210 - L2 LINE L2 -5 3267 3134 2240 141 28 22 chr10 114802152 114802514 -25514251 + THE1B LTR MaLR 1 364 0 212 294 9 64 chr10 114802699 114802808 -25513957 + MIR SINE MIR 124 226 -36 1536 194 72 4 chr10 114802882 114803160 -25513605 + AluJb SINE Alu 2 298 -14 239 339 92 9 chr10 114803336 114803445 -25513320 + L2 LINE L2 3138 3255 -17 312 27 0 0 chr10 114805020 114805057 -25511708 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr10 114805225 114805253 -25511512 + AT_rich Low_complexity Low_complexity 1 28 0 767 279 222 11 chr10 114805267 114805718 -25511047 + LTR50 LTR ERVL 12 557 -238 233 254 162 14 chr10 114805838 114805980 -25510785 + LTR50 LTR ERVL 632 794 -1 469 329 14 22 chr10 114806384 114806606 -25510159 + MLT1K LTR MaLR 207 426 -162 1663 143 78 13 chr10 114807045 114807566 -25509199 - MER51A LTR ERV1 -9 625 1 2312 147 5 3 chr10 114807568 114807955 -25508810 - MER51A-int LTR ERV1 -1 7815 7428 575 138 21 0 chr10 114807956 114808050 -25508715 - LTR54B LTR ERV1 -400 98 3 2305 110 3 0 chr10 114808050 114808378 -25508387 - MER51A-int LTR ERV1 -389 7148 6820 1574 81 69 29 chr10 114808376 114808622 -25508143 - MER51-int LTR ERV1 -7559 257 2 * 2852 199 26 3 chr10 114808822 114809429 -25507336 + MER67C LTR ERV1 1 621 -89 4805 186 29 5 chr10 114809652 114810713 -25506052 + L1MA4A LINE L1 3972 5058 -1088 2123 175 66 120 chr10 114810732 114811473 -25505292 + LTR8A LTR ERV1 27 727 0 1797 110 9 57 chr10 114811475 114811984 -25504781 + L1MA4A LINE L1 5068 5563 -740 1452 102 133 31 chr10 114811984 114812277 -25504488 - LTR23 LTR ERV1 -112 325 3 2086 108 37 21 chr10 114812279 114812603 -25504162 + L1MA4A LINE L1 5648 5980 -323 4939 101 28 8 chr10 114812603 114813354 -25503411 - MER4E LTR ERV1 0 766 1 2086 108 37 21 chr10 114813354 114813410 -25503355 + L1MA4A LINE L1 5980 6034 -269 3458 75 10 4 chr10 114813410 114813900 -25502865 - LTR6B LTR ERV1 0 558 66 1552 118 4 4 chr10 114813923 114814185 -25502580 + L1MA4A LINE L1 6031 6292 -11 3366 61 18 0 chr10 114815289 114815731 -25501034 - L1PA13 LINE L1 -4 6159 5710 215 330 68 23 chr10 114815785 114815873 -25500892 + L2 LINE L2 3145 3236 -36 2324 96 7 0 chr10 114816395 114816696 -25500069 - AluSp SINE Alu -9 304 2 366 373 48 10 chr10 114818192 114818379 -25498386 + MIR3 SINE MIR 8 196 -12 460 285 73 0 chr10 114818649 114818786 -25497979 - MIR SINE MIR -45 217 71 206 122 0 61 chr10 114818841 114818890 -25497875 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 2317 203 58 32 chr10 114820805 114821459 -25495306 + L1MC3 LINE L1 5752 6422 -1363 297 0 0 0 chr10 114821997 114822030 -25494735 + (TA)n Simple_repeat Simple_repeat 2 34 0 6014 97 18 26 chr10 114822035 114823201 -25493564 - L1PA12 LINE L1 0 6168 5018 2458 75 0 3 chr10 114823201 114823507 -25493258 - AluY SINE Alu -6 305 1 6014 97 18 26 chr10 114823507 114823780 -25492985 - L1PA12 LINE L1 -1150 5018 4744 364 356 82 0 chr10 114823901 114824109 -25492656 + L2 LINE L2 877 1101 -2213 1861 300 26 9 chr10 114824496 114825399 -25491366 + HERV16 LTR ERVL 1665 2629 -2367 2077 151 35 15 chr10 114825446 114825844 -25490921 - MSTA LTR MaLR 0 428 23 2206 129 7 0 chr10 114825931 114826233 -25490532 - AluSx SINE Alu -8 304 1 32 81 0 0 chr10 114827221 114827295 -25489470 + AT_rich Low_complexity Low_complexity 1 74 0 480 296 86 18 chr10 114827306 114827644 -25489121 + L1ME4a LINE L1 5522 5882 -239 4213 90 0 0 chr10 114828123 114828677 -25488088 - MER41A LTR ERV1 0 554 1 431 273 53 38 chr10 114830427 114830559 -25486206 + MIR3 SINE MIR 22 155 -53 204 308 29 77 chr10 114830937 114831041 -25485724 + MIR SINE MIR 57 156 -52 284 281 0 0 chr10 114831148 114831244 -25485521 - MER103 DNA DNA -67 99 4 225 65 0 0 chr10 114831549 114831580 -25485185 + (CA)n Simple_repeat Simple_repeat 2 32 0 2459 137 0 3 chr10 114831990 114832355 -25484410 - THE1B LTR MaLR 0 364 1 2987 109 2 9 chr10 114832355 114832812 -25483953 - THE1B-int LTR MaLR 0 1580 1127 257 330 75 11 chr10 114833617 114833711 -25483054 - MER5B DNA MER1_type -78 100 1 5028 229 36 28 chr10 114834296 114836205 -25480560 + L1MB8 LINE L1 3090 5011 -1167 3985 161 14 11 chr10 114836205 114836907 -25479858 + L1PA16 LINE L1 5463 6166 0 5028 229 36 28 chr10 114836907 114838086 -25478679 + L1MB8 LINE L1 5011 6178 0 183 129 0 0 chr10 114838311 114838342 -25478423 + (A)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 114838361 114838383 -25478382 + AT_rich Low_complexity Low_complexity 1 22 0 241 240 64 160 chr10 114838710 114839022 -25477743 - LTR16A1 LTR ERVL -175 282 1 584 340 20 5 chr10 114839086 114839289 -25477476 + MIR SINE MIR 57 262 0 1635 167 3 39 chr10 114841904 114842210 -25474555 - AluJo SINE Alu -13 299 5 878 266 25 8 chr10 114842680 114842917 -25473848 - L1MC4 LINE L1 -1033 7009 6769 5751 24 0 0 chr10 114842980 114843644 -25473121 - L1PA3 LINE L1 0 6155 5492 6461 30 1 0 chr10 114843644 114844514 -25472251 + L1PA3 LINE L1 4617 5487 -668 682 254 92 4 chr10 114844579 114844957 -25471808 + L1MEc LINE L1 2111 2478 -3737 * 1008 291 69 0 chr10 114844950 114845339 -25471426 + L1MEc LINE L1 3982 4397 -1818 500 286 45 60 chr10 114845465 114845797 -25470968 + L1MEc LINE L1 4418 4744 -1471 25 51 0 0 chr10 114846391 114846430 -25470335 + AT_rich Low_complexity Low_complexity 1 39 0 808 103 63 0 chr10 114848386 114848512 -25468253 - MER85 DNA T2_type -4 135 2 1517 210 66 18 chr10 114848627 114848961 -25467804 - MLT1A2 LTR MaLR -4 370 21 2148 112 13 10 chr10 114849267 114849579 -25467186 - AluSq SINE Alu 0 313 1 22 0 0 0 chr10 114850285 114850307 -25466458 + AT_rich Low_complexity Low_complexity 1 22 0 2553 49 7 3 chr10 114850349 114850657 -25466108 + AluY SINE Alu 1 309 -2 536 320 66 0 chr10 114850970 114851167 -25465598 - MIR SINE MIR 0 262 53 409 310 76 0 chr10 114852062 114852233 -25464532 - MIR SINE MIR -48 214 31 230 175 0 18 chr10 114853148 114853205 -25463560 + GA-rich Low_complexity Low_complexity 1 56 0 212 304 25 13 chr10 114856874 114856953 -25459812 + L2 LINE L2 3193 3272 0 572 327 27 5 chr10 114857220 114857440 -25459325 - MIR SINE MIR -36 226 2 251 213 0 0 chr10 114857590 114857637 -25459128 - MER4-int LTR ERV1 -5442 1156 1110 974 186 25 63 chr10 114859981 114860218 -25456547 + L1MA9 LINE L1 5891 6118 -194 528 157 113 0 chr10 114860223 114860338 -25456427 + L1MA9 LINE L1 6180 6307 -5 524 235 40 7 chr10 114860338 114860487 -25456278 + Charlie7 DNA MER1_type 1012 1165 -1447 23 0 0 0 chr10 114860825 114860848 -25455917 + AT_rich Low_complexity Low_complexity 1 23 0 472 319 97 9 chr10 114861816 114862042 -25454723 + MIR SINE MIR 3 248 -14 1952 141 0 0 chr10 114862338 114862614 -25454151 + AluSx SINE Alu 1 276 -36 220 308 64 0 chr10 114863719 114863797 -25452968 - MIR SINE MIR -102 160 78 1333 218 101 3 chr10 114863921 114864247 -25452518 + L1MC4 LINE L1 6730 7087 -955 2352 75 0 28 chr10 114864339 114864658 -25452107 - AluY SINE Alu -1 310 1 285 98 0 0 chr10 114865003 114865044 -25451721 + (GGA)n Simple_repeat Simple_repeat 1 41 0 3180 230 36 12 chr10 114915303 114916117 -25400648 + HERVL74 LTR ERVL 1251 2083 -3602 330 26 0 0 chr10 114916916 114916955 -25399810 + (CA)n Simple_repeat Simple_repeat 2 40 0 366 355 0 0 chr10 114917914 114918035 -25398730 - L2 LINE L2 -24 3289 3169 1993 97 13 44 chr10 114918126 114918424 -25398341 - AluSc SINE Alu -20 289 1 30 0 0 0 chr10 114918548 114918578 -25398187 + AT_rich Low_complexity Low_complexity 1 30 0 495 335 40 24 chr10 114918675 114918926 -25397839 - MIR SINE MIR -2 260 6 291 239 92 106 chr10 114919556 114919698 -25397067 + MIR SINE MIR 59 198 -64 24 53 0 0 chr10 114920134 114920172 -25396593 + AT_rich Low_complexity Low_complexity 1 38 0 1045 160 46 21 chr10 114920378 114920604 -25396161 - L1MA6 LINE L1 -126 6174 5940 732 105 38 8 chr10 114920604 114920733 -25396032 + L1MA6 LINE L1 6162 6298 -2 1045 160 46 21 chr10 114920733 114920744 -25396021 - L1MA6 LINE L1 -360 5940 5931 585 244 17 0 chr10 114920865 114921045 -25395720 + MER53 DNA DNA 5 187 -2 185 0 40 0 chr10 114921675 114921700 -25395065 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2148 82 31 14 chr10 114921716 114922008 -25394757 - AluY SINE Alu -14 297 1 1113 99 7 0 chr10 114922691 114922843 -25393922 - AluSp/q SINE Alu -4 309 157 378 352 34 11 chr10 114923790 114923966 -25392799 - MIR SINE MIR -76 186 7 1643 296 75 38 chr10 114924156 114925712 -25391053 + L1ME LINE L1 20 1667 -4594 12862 76 4 1 chr10 114925718 114927545 -25389220 - L1P LINE L1 -774 5398 3560 9700 152 11 28 chr10 114927536 114929337 -25387428 - L1P LINE L1 -4365 1781 11 * 491 340 92 35 chr10 114930131 114930854 -25385911 - L2 LINE L2 -222 3050 2281 1394 220 2 68 chr10 114931368 114931768 -25384997 + MLT1A2 LTR MaLR 1 374 0 2903 85 8 2 chr10 114932256 114932656 -25384109 + L1PA8 LINE L1 5771 6172 0 2083 149 10 0 chr10 114934246 114934596 -25382169 - AluSx SINE Alu 0 353 1 467 319 97 9 chr10 114934892 114935118 -25381647 - MIR SINE MIR -14 248 3 396 271 33 0 chr10 114935579 114935701 -25381064 - LTR16C LTR ERVL 0 491 366 2320 89 0 0 chr10 114936062 114936355 -25380410 - AluY SINE Alu -17 294 2 2546 103 24 22 chr10 114936446 114936855 -25379910 - L1MA1 LINE L1 -9 6293 5884 280 322 186 11 chr10 114937078 114937261 -25379504 + MIR SINE MIR 7 221 -41 433 255 18 13 chr10 114937813 114937977 -25378788 - L1ME1 LINE L1 -5 6161 5987 1396 229 145 35 chr10 114938009 114939122 -25377643 - L1ME1 LINE L1 -239 5927 4696 7246 199 31 21 chr10 114939295 114942210 -25374555 - L1PA16 LINE L1 -2 6164 3223 1756 197 63 7 chr10 114942212 114942673 -25374092 - L1MA5 LINE L1 0 6300 5814 * 9357 202 12 33 chr10 114942664 114943254 -25373511 - L1PA16 LINE L1 0 6166 5565 2024 119 24 10 chr10 114943254 114943549 -25373216 + AluY SINE Alu 1 299 -12 9357 202 12 33 chr10 114943549 114946543 -25370222 - L1PA16 LINE L1 -601 5565 2643 557 275 59 3 chr10 114946625 114946912 -25369853 - L1MEc LINE L1 -5352 1044 742 1778 153 10 24 chr10 114946926 114947214 -25369551 + AluJo SINE Alu 3 286 -26 233 146 21 0 chr10 114947214 114947262 -25369503 + (TA)n Simple_repeat Simple_repeat 1 49 0 33 85 0 0 chr10 114947269 114947351 -25369414 + AT_rich Low_complexity Low_complexity 1 82 0 234 189 19 0 chr10 114948978 114949056 -25367709 + CT-rich Low_complexity Low_complexity 1 79 0 26 30 0 0 chr10 114950585 114950618 -25366147 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 114951023 114951046 -25365719 + AT_rich Low_complexity Low_complexity 1 23 0 270 81 0 0 chr10 114951074 114951111 -25365654 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 196 128 13 51 chr10 114951507 114951585 -25365180 + (TATAA)n Simple_repeat Simple_repeat 2 76 0 623 257 55 11 chr10 114951914 114952097 -25364668 - MIR SINE MIR -63 199 9 209 281 236 0 chr10 114952548 114952637 -25364128 - MER91A DNA MER1_type 0 196 87 255 331 204 14 chr10 114952638 114952780 -25363985 - MER91A DNA MER1_type -25 171 3 274 220 16 141 chr10 114953234 114953425 -25363340 + L1MB7 LINE L1 6018 6184 0 195 371 29 43 chr10 114953561 114953701 -25363064 - L2 LINE L2 -9 3263 3126 4357 147 3 74 chr10 114953705 114954025 -25362740 - L1P LINE L1 -1907 4239 3898 2536 60 0 19 chr10 114954025 114954342 -25362423 - AluY SINE Alu 0 311 1 1719 178 11 3 chr10 114954345 114954631 -25362134 - AluJb SINE Alu -20 292 5 4357 147 3 74 chr10 114954631 114955243 -25361522 - L1P LINE L1 -2250 3896 3369 * 5368 167 12 2 chr10 114955238 114956836 -25359929 + L1PA13 LINE L1 4220 5830 -331 37959 71 8 7 chr10 114956836 114962983 -25353782 + L1PA5 LINE L1 2 6154 0 1995 142 0 0 chr10 114962978 114963308 -25353457 + L1PA13 LINE L1 5814 6143 -20 * 276 244 24 24 chr10 114963744 114963826 -25352939 - MIR SINE MIR -122 140 59 2137 154 19 0 chr10 114964129 114964499 -25352266 + Tigger2 DNA MER2_type 2342 2718 0 248 145 0 92 chr10 114965185 114965261 -25351504 + (TTA)n Simple_repeat Simple_repeat 2 70 0 529 307 105 22 chr10 114966323 114966551 -25350214 - MIR SINE MIR -1 261 15 189 244 171 89 chr10 114966736 114966859 -25349906 - MIR SINE MIR -98 164 32 697 263 116 0 chr10 114967950 114968140 -25348625 + MIR SINE MIR 51 262 0 285 98 0 0 chr10 114969168 114969209 -25347556 + (TCC)n Simple_repeat Simple_repeat 1 41 0 2367 75 0 28 chr10 114969554 114969873 -25346892 + AluY SINE Alu 1 310 -1 1343 233 111 9 chr10 114969964 114970430 -25346335 - L1MC4a LINE L1 -802 7006 6500 213 267 89 44 chr10 114970431 114970521 -25346244 + MIR SINE MIR 95 188 -74 189 74 0 0 chr10 114971823 114971850 -25344915 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 288 322 168 0 chr10 114972307 114972450 -25344315 + MIR SINE MIR 53 219 -43 1585 114 14 79 chr10 114972597 114972957 -25343808 + MER4A LTR ERV1 270 664 0 2514 119 29 43 chr10 114973149 114973414 -25343351 + MER4E LTR ERV1 1 268 -498 2366 110 0 3 chr10 114973414 114973722 -25343043 - AluSg1 SINE Alu -2 307 1 2514 119 29 43 chr10 114973722 114974063 -25342702 + MER4E LTR ERV1 268 766 0 367 333 40 7 chr10 114974314 114974464 -25342301 + MIR SINE MIR 92 246 -16 1740 135 3 0 chr10 114974625 114974922 -25341843 + L1MA4 LINE L1 5999 6296 -4 22 35 0 0 chr10 114975014 114975043 -25341722 + AT_rich Low_complexity Low_complexity 1 29 0 783 127 20 0 chr10 114976198 114976348 -25340417 + GA-rich Low_complexity Low_complexity 3 155 0 306 292 11 65 chr10 114976509 114976694 -25340071 + C-rich Low_complexity Low_complexity 5 179 0 * 348 273 23 40 chr10 114976564 114976740 -25340025 + CT-rich Low_complexity Low_complexity 5 177 0 444 345 0 0 chr10 114976767 114976906 -25339859 + C-rich Low_complexity Low_complexity 1 139 0 9048 67 61 0 chr10 114977038 114978276 -25338489 - HERVL LTR ERVL -1112 4542 3230 265 289 36 0 chr10 114978615 114978698 -25338067 + MIR SINE MIR 63 148 -60 293 247 0 25 chr10 114979272 114979353 -25337412 + MLT1L LTR MaLR 1 79 -536 2279 149 70 12 chr10 114980209 114980611 -25336154 - MSTB LTR MaLR -1 425 1 374 0 22 0 chr10 114980861 114980907 -25335858 + (CA)n Simple_repeat Simple_repeat 2 48 0 260 350 60 10 chr10 114981888 114981988 -25334777 + MIR SINE MIR 25 129 -133 2571 3 0 0 chr10 114981992 114982291 -25334474 - L1HS LINE L1 0 6155 5857 252 122 0 0 chr10 114982846 114982887 -25333878 + (T)n Simple_repeat Simple_repeat 1 41 0 261 217 57 28 chr10 114982995 114983101 -25333664 - L1ME4a LINE L1 -12 6109 6001 3354 204 72 24 chr10 114983202 114984064 -25332701 - L1MD1 LINE L1 -1 6635 5733 * 8029 198 106 60 chr10 114984052 114984596 -25332169 - L1MD1 LINE L1 -3894 2646 2128 353 58 19 0 chr10 114984596 114984648 -25332117 + (TA)n Simple_repeat Simple_repeat 1 53 0 8029 198 106 60 chr10 114984648 114986723 -25330042 - L1MD1 LINE L1 -4412 2128 16 582 235 26 26 chr10 114988685 114988838 -25327927 + MIR SINE MIR 5 157 -105 442 300 11 20 chr10 114988849 114989024 -25327741 - MLT2E LTR ERVL -454 174 1 313 268 71 16 chr10 114989231 114989358 -25327407 + LTR52-int LTR ERVL 1165 1298 -2258 339 25 0 0 chr10 114989464 114989504 -25327261 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 1989 215 105 30 chr10 114990215 114990720 -25326045 + MER50 LTR ERV1 10 580 -154 2509 69 0 0 chr10 114990720 114991026 -25325739 - AluY SINE Alu -5 306 1 1989 215 105 30 chr10 114991026 114991194 -25325571 + MER50 LTR ERV1 580 734 0 240 187 11 22 chr10 114991416 114991507 -25325258 + GA-rich Low_complexity Low_complexity 3 92 0 409 241 56 15 chr10 114991657 114991852 -25324913 - HAL1b LINE L1 -155 1193 991 523 200 152 0 chr10 114993286 114993411 -25323354 - MIR SINE MIR -91 171 28 329 164 30 15 chr10 114993891 114993958 -25322807 + MIR SINE MIR 77 144 -118 2592 145 37 2 chr10 114994010 114994417 -25322348 - MSTB LTR MaLR -4 422 2 189 341 30 22 chr10 114994696 114994831 -25321934 - MER5A DNA MER1_type -53 136 1 759 201 43 0 chr10 114995409 114995548 -25321217 + FRAM SINE Alu 4 148 -18 24354 139 9 14 chr10 114995917 115002055 -25314710 + L1PA8A LINE L1 2 6167 -279 463 122 95 0 chr10 115002055 115002129 -25314636 + AluSg/x SINE Alu 214 294 -16 28 0 0 0 chr10 115003128 115003156 -25313609 + AT_rich Low_complexity Low_complexity 1 28 0 565 335 30 0 chr10 115003703 115003900 -25312865 + MIR SINE MIR 55 257 -5 1276 205 123 36 chr10 115004713 115005161 -25311604 + L1MB7 LINE L1 5698 6184 0 257 330 75 11 chr10 115007712 115007806 -25308959 - MER5B DNA MER1_type -78 100 1 6325 230 34 30 chr10 115008391 115010302 -25306463 + L1MB8 LINE L1 3090 5005 -1173 3905 162 14 13 chr10 115010302 115011005 -25305760 + L1PA16 LINE L1 5463 6166 0 6325 230 34 30 chr10 115011005 115012184 -25304581 + L1MB8 LINE L1 5005 6178 0 183 129 0 0 chr10 115012409 115012440 -25304325 + (A)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 115012459 115012481 -25304284 + AT_rich Low_complexity Low_complexity 1 22 0 572 340 20 5 chr10 115013184 115013387 -25303378 + MIR SINE MIR 57 262 0 1662 167 3 39 chr10 115016002 115016308 -25300457 - AluJo SINE Alu -13 299 5 802 266 25 8 chr10 115016778 115017015 -25299750 - L1MC4 LINE L1 -1033 7009 6769 5759 24 0 0 chr10 115017078 115017742 -25299023 - L1PA3 LINE L1 0 6155 5492 6186 30 1 0 chr10 115017742 115018612 -25298153 + L1PA3 LINE L1 4617 5487 -668 575 251 98 3 chr10 115018776 115019095 -25297670 + L1M4c LINE L1 2302 2645 -3737 * 911 291 69 0 chr10 115019091 115019480 -25297285 + L1M4c LINE L1 4149 4564 -1818 229 295 43 49 chr10 115019606 115019935 -25296830 + L1M4c LINE L1 4585 4911 -1471 25 51 0 0 chr10 115020529 115020568 -25296197 + AT_rich Low_complexity Low_complexity 1 39 0 803 103 63 0 chr10 115022524 115022650 -25294115 - MER85 DNA T2_type -4 135 2 1406 210 66 18 chr10 115022765 115023099 -25293666 - MLT1A2 LTR MaLR -4 370 21 2178 112 13 10 chr10 115023405 115023717 -25293048 - AluSq SINE Alu 0 313 1 22 0 0 0 chr10 115024423 115024445 -25292320 + AT_rich Low_complexity Low_complexity 1 22 0 2558 58 0 3 chr10 115024487 115024799 -25291966 + AluY SINE Alu 1 311 0 537 320 66 0 chr10 115025108 115025305 -25291460 - MIR SINE MIR 0 262 53 402 310 76 0 chr10 115026200 115026371 -25290394 - MIR SINE MIR -48 214 31 230 175 0 18 chr10 115027286 115027343 -25289422 + GA-rich Low_complexity Low_complexity 1 56 0 208 342 13 0 chr10 115031012 115031091 -25285674 + L2 LINE L2 3234 3313 0 569 327 27 5 chr10 115031358 115031578 -25285187 - MIR SINE MIR -36 226 2 237 296 0 0 chr10 115031719 115031773 -25284992 + (CA)n Simple_repeat Simple_repeat 1 54 0 903 186 25 63 chr10 115034119 115034356 -25282409 + L1MA9 LINE L1 5891 6118 -194 495 157 113 0 chr10 115034361 115034476 -25282289 + L1MA9 LINE L1 6180 6307 -5 482 235 40 7 chr10 115034476 115034625 -25282140 + Charlie7 DNA MER1_type 1012 1165 -1447 23 0 0 0 chr10 115034963 115034986 -25281779 + AT_rich Low_complexity Low_complexity 1 23 0 561 320 48 20 chr10 115035496 115035746 -25281019 + MIR SINE MIR 6 262 0 219 114 0 0 chr10 115036792 115036827 -25279938 + (CA)n Simple_repeat Simple_repeat 2 36 0 4275 170 40 41 chr10 115036870 115038010 -25278755 - L1PB4 LINE L1 0 6156 5021 1795 150 8 0 chr10 115038010 115038277 -25278488 - AluSx SINE Alu -20 292 24 4275 170 40 41 chr10 115038277 115038598 -25278167 - L1PB4 LINE L1 -1135 5021 4701 21 0 0 0 chr10 115039230 115039251 -25277514 + AT_rich Low_complexity Low_complexity 1 21 0 677 247 93 0 chr10 115039378 115039540 -25277225 - MER45A DNA AcHobo 0 178 2 860 187 0 13 chr10 115040493 115040648 -25276117 - MLT1A2 LTR MaLR -221 153 1 372 290 189 12 chr10 115040649 115040818 -25275947 - L1MC4 LINE L1 -423 7619 7421 805 302 26 24 chr10 115040822 115041200 -25275565 - L1MC4 LINE L1 -724 7318 6940 213 292 0 0 chr10 115041207 115041279 -25275486 + T-rich Low_complexity Low_complexity 1 72 0 1763 264 62 17 chr10 115041293 115042102 -25274663 - L1MEc LINE L1 -2992 3223 2379 1158 186 32 113 chr10 115042118 115042169 -25274596 - LTR56 LTR ERV1 0 437 383 1585 151 38 79 chr10 115042169 115042560 -25274205 - THE1C LTR MaLR 0 375 1 1158 186 32 113 chr10 115042560 115042668 -25274097 - LTR56 LTR ERV1 -54 383 268 1412 88 0 0 chr10 115042668 115042860 -25273905 - L1PA8 LINE L1 -7 6165 5974 1158 186 32 113 chr10 115042860 115043211 -25273554 - LTR56 LTR ERV1 -169 268 1 1257 234 77 21 chr10 115043217 115043751 -25273014 - L1MEc LINE L1 -3998 2398 1835 519 300 63 21 chr10 115043797 115044370 -25272395 - L1MEc LINE L1 -5214 1182 586 297 325 134 5 chr10 115044444 115044653 -25272112 - LTR50 LTR ERVL -217 578 343 408 269 62 49 chr10 115044837 115045423 -25271342 - L1ME LINE L1 -585 5579 4982 204 360 29 22 chr10 115045457 115045596 -25271169 + L2 LINE L2 2952 3091 -181 569 249 10 99 chr10 115045650 115045943 -25270822 - MER102a DNA MER1_type -14 316 50 403 256 133 44 chr10 115046827 115047007 -25269758 + MIR SINE MIR 13 208 -54 228 336 8 0 chr10 115047513 115047638 -25269127 + (TG)n Simple_repeat Simple_repeat 1 126 0 2395 97 0 10 chr10 115047651 115047960 -25268805 - AluSg SINE Alu -4 306 1 507 240 50 56 chr10 115048272 115048451 -25268314 - MER5B DNA MER1_type 0 178 1 318 211 40 0 chr10 115049026 115049104 -25267661 - MER91 DNA MER1_type 0 190 113 187 355 0 0 chr10 115049321 115049383 -25267382 + L2 LINE L2 3211 3272 0 445 296 43 38 chr10 115049676 115049862 -25266903 - MIR3 SINE MIR -7 201 15 1342 97 0 11 chr10 115050069 115050245 -25266520 - AluSp SINE Alu -3 310 137 485 271 104 31 chr10 115051187 115051444 -25265321 + L1ME LINE L1 5375 5626 -495 858 244 36 5 chr10 115052318 115052539 -25264226 - MLT1C LTR MaLR 0 467 240 257 205 154 0 chr10 115052548 115052626 -25264139 - MLT1C LTR MaLR -361 106 17 194 333 19 0 chr10 115052742 115052796 -25263969 + L2 LINE L2 3212 3266 -6 249 108 0 0 chr10 115053269 115053306 -25263459 + (TA)n Simple_repeat Simple_repeat 1 37 0 356 313 146 26 chr10 115054196 115054429 -25262336 - MLT1L LTR MaLR 0 615 355 196 388 35 9 chr10 115057788 115057904 -25258861 + L2 LINE L2 3144 3262 -10 319 148 168 20 chr10 115058015 115058116 -25258649 + L1ME3A LINE L1 5851 5966 -204 341 261 188 73 chr10 115059577 115059976 -25256789 - L1M2 LINE L1 -5899 950 506 * 379 279 146 31 chr10 115059877 115060103 -25256662 + L1M2 LINE L1 855 1106 -5743 254 323 32 21 chr10 115060397 115060490 -25256275 + L2 LINE L2 3203 3296 -17 230 289 211 7 chr10 115060659 115060801 -25255964 + MIR3 SINE MIR 36 206 -2 4650 166 43 41 chr10 115060907 115061299 -25255466 - L1MA9 LINE L1 -4 6308 5918 1794 199 20 35 chr10 115061299 115061700 -25255065 - MSTD LTR MaLR 0 396 2 4650 166 43 41 chr10 115061700 115061822 -25254943 - L1MA9 LINE L1 -394 5918 5798 2322 100 0 16 chr10 115061822 115062133 -25254632 - AluSq SINE Alu -7 306 1 4650 166 43 41 chr10 115062133 115062727 -25254038 - L1MA9 LINE L1 -514 5798 5196 2234 119 0 0 chr10 115064082 115064377 -25252388 - AluSq SINE Alu -18 295 1 21 36 0 0 chr10 115064379 115064407 -25252358 + AT_rich Low_complexity Low_complexity 1 28 0 350 305 204 20 chr10 115064546 115064899 -25251866 + L2 LINE L2 2665 3084 -188 1986 261 17 43 chr10 115065554 115066250 -25250515 + L1ME1 LINE L1 5471 6148 -18 354 283 66 0 chr10 115066340 115066446 -25250319 - MIR SINE MIR -82 180 68 29 47 0 0 chr10 115067458 115067501 -25249264 + AT_rich Low_complexity Low_complexity 1 43 0 864 206 151 66 chr10 115067568 115067840 -25248925 - AluJb SINE Alu -3 299 5 213 222 56 0 chr10 115067869 115067923 -25248842 - MIR SINE MIR -103 159 103 224 306 152 49 chr10 115067935 115068522 -25248243 - L2 LINE L2 -309 2963 2286 2168 122 3 0 chr10 115068522 115068818 -25247947 + AluSx SINE Alu 1 297 -15 224 306 152 49 chr10 115068818 115068881 -25247884 - L2 LINE L2 -986 2286 2231 226 125 83 0 chr10 115069397 115069445 -25247320 + MIR SINE MIR 97 148 -114 345 260 130 0 chr10 115069543 115069643 -25247122 + MIR SINE MIR 129 241 -21 1155 101 26 16 chr10 115069897 115070086 -25246679 + MER61D LTR ERV1 311 501 0 273 274 115 83 chr10 115070528 115070685 -25246080 - MIR SINE MIR -50 212 51 1929 130 7 27 chr10 115070688 115070987 -25245778 - AluSx SINE Alu -9 303 11 2057 154 3 3 chr10 115071008 115071320 -25245445 - AluSx SINE Alu 0 312 1 816 213 0 32 chr10 115071671 115071826 -25244939 - AluJb SINE Alu -22 290 141 488 249 76 56 chr10 115072384 115072581 -25244184 + MIR SINE MIR 61 261 -1 290 26 26 0 chr10 115073831 115073870 -25242895 + (CA)n Simple_repeat Simple_repeat 2 41 0 255 61 0 0 chr10 115073871 115073904 -25242861 + (GA)n Simple_repeat Simple_repeat 1 33 0 189 74 0 0 chr10 115074217 115074244 -25242521 + (TG)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr10 115075014 115075035 -25241730 + AT_rich Low_complexity Low_complexity 1 21 0 579 243 106 11 chr10 115075864 115076053 -25240712 + Charlie8 DNA MER1_type 51 257 -2160 2223 109 0 0 chr10 115076202 115076496 -25240269 - AluSx SINE Alu -14 298 5 2402 165 173 15 chr10 115076868 115077405 -25239360 + MER67C LTR ERV1 1 648 -62 216 0 0 0 chr10 115077405 115077429 -25239336 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2402 165 173 15 chr10 115077429 115077504 -25239261 + MER67C LTR ERV1 648 710 0 293 302 33 23 chr10 115079224 115079349 -25237416 + MIR SINE MIR 69 142 -66 432 258 98 31 chr10 115079627 115079790 -25236975 + MER5B DNA MER1_type 2 175 -3 227 270 87 32 chr10 115079834 115079960 -25236805 + MIR SINE MIR 64 196 -66 267 395 26 0 chr10 115080067 115080181 -25236584 + L2 LINE L2 3127 3243 -29 182 256 23 0 chr10 115082760 115082803 -25233962 - L2 LINE L2 -17 3255 3212 314 221 137 0 chr10 115082865 115082960 -25233805 - MER63 DNA MER1_type -97 739 6 246 339 103 12 chr10 115082977 115083142 -25233623 - MIR SINE MIR -71 191 12 2402 114 8 22 chr10 115083254 115083623 -25233142 + THE1B LTR MaLR 1 364 0 210 276 118 66 chr10 115084503 115084579 -25232186 - MIR SINE MIR -90 118 39 22 0 0 0 chr10 115086084 115086106 -25230659 + AT_rich Low_complexity Low_complexity 1 22 0 1426 100 43 0 chr10 115086265 115086495 -25230270 + L1MA3 LINE L1 6066 6305 0 22 0 0 0 chr10 115086495 115086517 -25230248 + AT_rich Low_complexity Low_complexity 1 22 0 500 242 83 23 chr10 115086606 115086870 -25229895 - L1ME4a LINE L1 -46 6075 5796 24 0 0 0 chr10 115087467 115087491 -25229274 + AT_rich Low_complexity Low_complexity 1 24 0 4998 154 21 2 chr10 115087491 115088412 -25228353 - L1PA16 LINE L1 -5 6161 5224 508 283 46 79 chr10 115088580 115088627 -25228138 - MIR SINE MIR -10 252 205 2207 135 3 0 chr10 115088627 115088938 -25227827 - AluSq SINE Alu -1 312 1 508 283 46 79 chr10 115088938 115089130 -25227635 - MIR SINE MIR -57 205 21 304 311 168 18 chr10 115089405 115089572 -25227193 - MIR3 SINE MIR -13 195 4 304 263 51 35 chr10 115089608 115089854 -25226911 + L1ME4a LINE L1 5652 5908 -213 2282 121 0 0 chr10 115090050 115090363 -25226402 - AluSq SINE Alu 0 313 1 480 221 0 0 chr10 115090436 115090522 -25226243 - MER5A DNA MER1_type -84 105 20 311 316 311 0 chr10 115091153 115091349 -25225416 - MIR SINE MIR -3 259 3 380 271 51 42 chr10 115091356 115091474 -25225291 - L2 LINE L2 -6 3307 3189 251 286 16 0 chr10 115091540 115091603 -25225162 + MIR3 SINE MIR 93 156 -52 1700 184 73 149 chr10 115091797 115092153 -25224612 + LTR8A LTR ERV1 35 306 -421 2610 137 31 5 chr10 115092153 115092570 -25224195 - MSTA LTR MaLR 0 428 1 1700 184 73 149 chr10 115092570 115092963 -25223802 + LTR8A LTR ERV1 306 727 0 2129 130 3 0 chr10 115093388 115093695 -25223070 + AluSq SINE Alu 1 308 -5 1382 192 58 73 chr10 115093927 115094323 -25222442 + MLT1B LTR MaLR 1 390 0 1556 263 65 64 chr10 115095064 115095782 -25220983 + MER21B LTR ERV1 1 719 -144 2243 110 0 3 chr10 115096198 115096498 -25220267 - AluSx SINE Alu -13 299 1 823 122 41 0 chr10 115096523 115096646 -25220119 + FRAM SINE Alu 35 162 -14 394 319 88 0 chr10 115096701 115096861 -25219904 + MIR SINE MIR 76 249 -13 318 313 80 30 chr10 115098016 115098217 -25218548 - MIR SINE MIR -2 260 50 4795 156 18 7 chr10 115098365 115099265 -25217500 + L1MA5 LINE L1 5385 6294 -6 2742 224 53 26 chr10 115149304 115150161 -25166604 + L1ME1 LINE L1 5285 6161 -5 1751 206 40 2 chr10 115150182 115150629 -25166136 + L1MB7 LINE L1 5643 6106 -78 265 341 0 12 chr10 115152904 115152989 -25163776 + MIR SINE MIR 178 261 -1 347 284 0 0 chr10 115153772 115153867 -25162898 - MIR SINE MIR 0 262 168 2079 78 4 15 chr10 115154051 115154322 -25162443 + AluY SINE Alu 35 302 -9 2171 116 20 0 chr10 115155297 115155589 -25161176 + AluSx SINE Alu 1 298 -14 907 178 6 50 chr10 115156084 115156264 -25160501 - FRAM SINE Alu -9 167 1 21 36 0 0 chr10 115156987 115157015 -25159750 + AT_rich Low_complexity Low_complexity 1 28 0 181 267 0 0 chr10 115157287 115157332 -25159433 - MIR SINE MIR -63 145 101 521 296 17 39 chr10 115157890 115158069 -25158696 + MIR SINE MIR 13 187 -75 13765 212 22 26 chr10 115158074 115160967 -25155798 + L1PA12 LINE L1 12 2912 -4672 2013 129 48 31 chr10 115160967 115161323 -25155442 - THE1B LTR MaLR 0 364 3 11301 100 15 5 chr10 115161325 115162889 -25153876 - THE1B-int LTR MaLR 0 1580 2 2120 105 71 34 chr10 115162890 115163241 -25153524 - THE1B LTR MaLR 0 364 1 13765 212 22 26 chr10 115163241 115164710 -25152055 + L1PA12 LINE L1 2912 5442 -2142 6462 91 9 3 chr10 115164711 115166017 -25150748 + L1PA11 LINE L1 4855 6171 -3 203 282 169 8 chr10 115166445 115166569 -25150196 + L2 LINE L2 3169 3312 -1 855 102 78 0 chr10 115166619 115166747 -25150018 + MER85 DNA T2_type 1 138 -1 22 35 0 0 chr10 115166952 115166981 -25149784 + AT_rich Low_complexity Low_complexity 1 29 0 1692 72 32 8 chr10 115168219 115168492 -25148273 + L1MA1 LINE L1 6038 6316 0 472 275 100 30 chr10 115168837 115169037 -25147728 - MIR SINE MIR -37 225 12 284 293 113 30 chr10 115169825 115170091 -25146674 - L1ME LINE L1 -422 5699 5412 21 36 0 0 chr10 115170138 115170166 -25146599 + AT_rich Low_complexity Low_complexity 1 28 0 736 33 0 0 chr10 115170304 115170396 -25146369 + L1P LINE L1 1 92 -6054 12112 51 75 13 chr10 115170396 115172139 -25144626 + L1P LINE L1 617 2466 -3680 5650 51 2 4 chr10 115172239 115173181 -25143584 - L1PA5 LINE L1 -152 6002 5063 * 8105 31 6 0 chr10 115173175 115174199 -25142566 + L1PA5 LINE L1 4065 5094 -1052 280 155 70 42 chr10 115174200 115174271 -25142494 + MIR SINE MIR 97 169 -93 840 170 17 78 chr10 115174419 115174649 -25142116 - MER65C LTR ERV1 -2 459 244 244 282 64 13 chr10 115174942 115175020 -25141745 + L2 LINE L2 3186 3267 -5 2319 108 0 10 chr10 115175473 115175780 -25140985 - AluSg SINE Alu -6 304 1 201 273 93 47 chr10 115176977 115177127 -25139638 - L2 LINE L2 -410 2904 2748 300 231 77 0 chr10 115177151 115177229 -25139536 - LTR16C LTR ERVL 0 491 408 355 250 161 54 chr10 115177652 115177876 -25138889 + L1ME4a LINE L1 5793 6040 -81 731 233 19 37 chr10 115179075 115179290 -25137475 - L1MD2 LINE L1 -17 6342 6132 383 347 71 13 chr10 115179697 115179922 -25136843 + MIR SINE MIR 15 252 -10 2229 122 17 8 chr10 115180935 115181287 -25135478 - THE1A LTR MaLR 0 355 1 32397 49 2 2 chr10 115182191 115186412 -25130353 - L1P LINE L1 -1924 4222 1 258 239 81 7 chr10 115186512 115186657 -25130108 + L1MC4a LINE L1 5834 5994 -127 4342 183 12 16 chr10 115187128 115188150 -25128615 - L1MB5 LINE L1 -8 6166 5151 323 277 10 30 chr10 115190113 115190214 -25126551 - MER5A DNA MER1_type -82 107 9 333 310 75 55 chr10 115190894 115191094 -25125671 - MIR SINE MIR -31 231 28 543 270 29 0 chr10 115191303 115191477 -25125288 - Charlie8 DNA MER1_type -2147 270 92 180 111 0 0 chr10 115191512 115191539 -25125226 + (GAA)n Simple_repeat Simple_repeat 2 28 0 267 236 12 66 chr10 115191651 115191776 -25124989 + MIR SINE MIR 75 185 -23 793 286 45 33 chr10 115192095 115192427 -25124338 + L3 LINE CR1 1201 1536 -41 1672 263 54 120 chr10 115193586 115195020 -25121745 + L1M2 LINE L1 2 1705 -5504 258 232 18 0 chr10 115195336 115195392 -25121373 - L2 LINE L2 -93 3220 3164 1861 188 13 42 chr10 115196473 115196930 -25119835 + MER41B LTR ERV1 157 600 -35 4091 132 101 45 chr10 115197008 115197790 -25118975 + LTR12 LTR ERV1 1 826 0 825 17 127 0 chr10 115197790 115197908 -25118857 + LTR12 LTR ERV1 582 714 0 502 216 9 0 chr10 115198247 115198358 -25118407 + L1MC3 LINE L1 7121 7232 -553 1613 153 69 28 chr10 115198360 115198751 -25118014 + L1MC3 LINE L1 7373 7779 -6 4064 232 14 5 chr10 115198997 115200130 -25116635 - L1PA15-16 LINE L1 -3172 3677 2535 2481 135 26 7 chr10 115200630 115201059 -25115706 - Tigger4(Zombi) DNA MER2_type 0 2731 2295 418 189 0 44 chr10 115201056 115201146 -25115619 - Tigger4(Zombi) DNA MER2_type -2644 87 2 * 230 231 0 62 chr10 115201095 115201160 -25115605 + MER46A DNA MER2_type 97 157 -79 * 305 170 0 0 chr10 115201186 115201239 -25115526 - L1PA15-16 LINE L1 -4304 2545 2493 5296 178 68 153 chr10 115201574 115203456 -25113309 + MER52A LTR ERV1 1 1723 -32 328 397 39 8 chr10 115203510 115203868 -25112897 + LTR16C LTR ERVL 121 489 -2 2141 133 0 3 chr10 115204302 115204604 -25112161 + AluSx SINE Alu 1 301 -11 380 252 58 7 chr10 115204841 115204980 -25111785 + MER117 DNA MER1_type 5 150 -47 187 265 20 20 chr10 115205156 115205205 -25111560 + L2 LINE L2 3171 3219 -94 1018 226 103 40 chr10 115205210 115205665 -25111100 + L1MCc LINE L1 507 990 -4918 212 98 0 49 chr10 115205683 115205724 -25111041 + (CACG)n Simple_repeat Simple_repeat 1 39 0 534 266 24 19 chr10 115205724 115205933 -25110832 + L1MCc LINE L1 1425 1797 -4810 628 300 186 9 chr10 115206824 115207147 -25109618 - L2 LINE L2 -76 3237 2858 800 257 47 12 chr10 115207328 115207729 -25109036 - L1MC4 LINE L1 -395 7647 7095 * 4051 217 20 5 chr10 115207724 115208788 -25107977 - L1 LINE L1 -2366 3780 2701 * 6576 164 27 12 chr10 115208785 115211075 -25105690 + L1PB3 LINE L1 3817 6138 -16 371 338 88 26 chr10 115211924 115212152 -25104613 - MIR SINE MIR -16 246 5 297 135 0 0 chr10 115212377 115212429 -25104336 + (CATATA)n Simple_repeat Simple_repeat 6 57 0 206 302 179 0 chr10 115212433 115212539 -25104226 - MIR SINE MIR -8 254 130 200 135 0 27 chr10 115213439 115213476 -25103289 + (TTTTC)n Simple_repeat Simple_repeat 1 36 0 291 294 60 60 chr10 115213981 115214199 -25102566 + L3b LINE CR1 1104 1321 -262 180 344 0 16 chr10 115215019 115215083 -25101682 + MIR SINE MIR 28 90 -172 219 247 0 10 chr10 115215752 115215810 -25100955 + CT-rich Low_complexity Low_complexity 2 100 0 572 267 43 11 chr10 115216873 115217060 -25099705 + MER117 DNA MER1_type 5 197 0 775 280 112 0 chr10 115217249 115217481 -25099284 - MIR SINE MIR 0 262 5 21625 34 1 0 chr10 115219306 115222711 -25094054 - L1PA4 LINE L1 0 6155 2750 17552 39 51 1 chr10 115222812 115225720 -25091045 + L1PA4 LINE L1 3200 6154 -1 31 0 0 0 chr10 115225751 115225782 -25090983 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr10 115226418 115226441 -25090324 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 115227182 115227202 -25089563 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1714 172 24 0 chr10 115227233 115227530 -25089235 - AluSx SINE Alu -8 304 1 2132 69 0 11 chr10 115227744 115228006 -25088759 + AluY SINE Alu 35 293 -18 953 333 49 14 chr10 115229195 115229621 -25087144 + LTR16A LTR ERVL 1 441 -9 2364 119 8 24 chr10 115229945 115230315 -25086450 - THE1B LTR MaLR 0 364 1 11698 96 3 3 chr10 115230315 115231894 -25084871 - THE1B-int LTR MaLR 0 1580 2 1670 143 10 24 chr10 115231895 115232189 -25084576 - THE1B LTR MaLR 0 364 75 581 322 48 0 chr10 115232795 115233003 -25083762 - MIR SINE MIR -26 236 19 527 339 17 0 chr10 115233157 115233334 -25083431 - MIR SINE MIR -82 180 1 21 0 0 0 chr10 115233882 115233903 -25082862 + AT_rich Low_complexity Low_complexity 1 21 0 9858 53 8 5 chr10 115233914 115235960 -25080805 - L1PA6 LINE L1 -2 6152 4101 2216 52 35 3 chr10 115235960 115236249 -25080516 + L1PA7 LINE L1 5855 6152 -2 5172 101 39 6 chr10 115236266 115237139 -25079626 + MER4A-int LTR ERV1 1594 2495 -4103 1314 158 71 0 chr10 115237139 115237379 -25079386 - LTR8 LTR ERV1 -434 257 1 3375 140 96 34 chr10 115237379 115238269 -25078496 + MER4A-int LTR ERV1 2737 3681 -2917 * 10267 107 68 19 chr10 115238268 115239859 -25076906 + MER4A-int LTR ERV1 3837 5533 -1065 2113 119 0 3 chr10 115239859 115240152 -25076613 + AluSg SINE Alu 1 292 -18 10267 107 68 19 chr10 115240152 115240416 -25076349 + MER4A-int LTR ERV1 5533 5783 -815 4070 98 54 14 chr10 115240416 115241082 -25075683 + MER4A-int LTR ERV1 5904 6596 -2 576 113 21 10 chr10 115241090 115241187 -25075578 + MER4A LTR ERV1 1 98 -566 1710 101 14 70 chr10 115241187 115241512 -25075253 + MER4A LTR ERV1 261 624 -40 2031 137 7 0 chr10 115241512 115241805 -25074960 + AluSq SINE Alu 1 295 -18 1710 101 14 70 chr10 115241805 115241844 -25074921 + MER4A LTR ERV1 624 664 0 237 147 0 0 chr10 115242074 115242108 -25074657 + MIR SINE MIR 213 246 -16 883 161 16 78 chr10 115243556 115243749 -25073016 - MER20 DNA MER1_type 0 219 39 931 119 0 0 chr10 115243750 115243893 -25072872 + MER4-int LTR ERV1 5390 5532 -1066 2450 74 25 45 chr10 115244121 115244353 -25072412 - L1PA13 LINE L1 -5 6158 5934 2541 48 3 0 chr10 115244353 115244646 -25072119 - AluY SINE Alu -17 294 1 2450 74 25 45 chr10 115244646 115244766 -25071999 - L1PA13 LINE L1 -229 5934 5813 352 246 58 100 chr10 115245267 115245624 -25071141 - MLT1J LTR MaLR -4 507 116 482 265 77 39 chr10 115246944 115247187 -25069578 + MIR SINE MIR 6 247 -15 2515 62 0 23 chr10 115247728 115248036 -25068729 - AluY SINE Alu -10 301 1 816 244 38 34 chr10 115248223 115248461 -25068304 + MIR SINE MIR 23 261 -1 1148 166 218 42 chr10 115249767 115250098 -25066667 + MSTD LTR MaLR 1 389 -7 25 0 0 0 chr10 115250218 115250243 -25066522 + AT_rich Low_complexity Low_complexity 1 25 0 1732 181 3 13 chr10 115250974 115251288 -25065477 - AluJo SINE Alu 0 312 2 237 276 41 31 chr10 115251290 115251388 -25065377 + MIR3 SINE MIR 81 179 -29 1787 216 19 40 chr10 115251860 115252285 -25064480 - L1MA10 LINE L1 0 6334 5919 208 264 62 85 chr10 115252295 115252424 -25064341 + L2 LINE L2 3147 3272 0 1848 151 0 36 chr10 115252466 115252770 -25063995 + AluSx SINE Alu 1 293 -19 180 217 0 0 chr10 115253493 115253539 -25063226 + (CA)n Simple_repeat Simple_repeat 1 46 0 317 294 186 44 chr10 115254101 115254270 -25062495 + L2 LINE L2 2552 2696 -576 5887 62 15 6 chr10 115254270 115255012 -25061753 + L1PA6 LINE L1 5428 6176 0 317 294 186 44 chr10 115255012 115255284 -25061481 + L2 LINE L2 2696 3068 -204 1227 189 15 74 chr10 115255368 115255707 -25061058 - L1MA7 LINE L1 -2 6289 5971 1371 139 0 5 chr10 115255707 115255909 -25060856 - AluSc SINE Alu -15 294 94 508 191 16 10 chr10 115255909 115256042 -25060723 - L1MA7 LINE L1 -237 5927 5813 252 0 0 0 chr10 115256131 115256159 -25060606 + (CA)n Simple_repeat Simple_repeat 1 28 0 322 279 45 45 chr10 115256507 115256562 -25060203 + L1MC5 LINE L1 7477 7531 -430 2267 74 3 49 chr10 115256562 115256888 -25059877 + AluY SINE Alu 1 311 0 322 279 45 45 chr10 115256888 115257076 -25059689 + L1MC5 LINE L1 7530 7720 -241 832 267 18 14 chr10 115257466 115257687 -25059078 + MIR SINE MIR 3 224 -38 2351 102 0 0 chr10 115257806 115258110 -25058655 - AluSg SINE Alu -6 304 1 302 248 105 0 chr10 115258205 115258332 -25058433 - MIR SINE MIR -62 146 21 900 218 65 28 chr10 115259020 115259236 -25057529 - MER58A DNA MER1_type 0 224 1 483 269 21 14 chr10 115259261 115259406 -25057359 - MIR3 SINE MIR -61 147 2 587 313 22 11 chr10 115259448 115259630 -25057135 + MIR3 SINE MIR 18 201 -7 192 77 0 0 chr10 115260900 115260926 -25055839 + (T)n Simple_repeat Simple_repeat 1 26 0 3842 36 5 0 chr10 115260926 115261364 -25055401 - L1PA3 LINE L1 0 6155 5716 479 255 85 48 chr10 115261364 115261552 -25055213 - MIR SINE MIR -15 247 53 299 253 146 38 chr10 115262203 115262361 -25054404 + MIR SINE MIR 79 253 -9 597 259 74 17 chr10 115262361 115262571 -25054194 + MIR SINE MIR 33 248 -14 269 217 0 0 chr10 115262923 115262983 -25053782 - L1P LINE L1 -1151 4995 4936 1383 62 6 28 chr10 115263005 115263213 -25053552 - L1PA5 LINE L1 -13 6155 5966 4093 131 19 0 chr10 115263232 115263828 -25052937 + L1PA15 LINE L1 5556 6162 -3 315 348 11 0 chr10 115264795 115264887 -25051878 + MIR SINE MIR 2 94 -168 274 284 0 0 chr10 115264908 115264975 -25051790 - L2 LINE L2 -194 3078 3012 256 280 25 42 chr10 115265069 115265187 -25051578 - HAL1b LINE L1 -439 909 794 1065 294 65 14 chr10 115265238 115265592 -25051173 + LTR40a LTR ERVL 10 381 -138 1921 170 57 37 chr10 115265606 115266147 -25050618 - MLT2A2 LTR ERVL 0 554 1 489 202 50 0 chr10 115266147 115266245 -25050520 + LTR40b LTR ERVL 360 462 0 953 289 74 58 chr10 115266282 115266703 -25050062 - HAL1b LINE L1 -494 854 414 2248 112 3 7 chr10 115266703 115267008 -25049757 - AluSg SINE Alu -6 304 1 953 289 74 58 chr10 115267008 115267332 -25049433 - HAL1b LINE L1 -934 414 97 191 261 63 72 chr10 115269220 115269331 -25047434 - L2 LINE L2 -2 3270 3161 191 250 66 13 chr10 115269477 115269553 -25047212 - MIR SINE MIR 0 262 183 440 342 53 11 chr10 115269885 115270072 -25046693 - MIR SINE MIR -48 214 20 183 320 39 29 chr10 115270446 115270549 -25046216 + L2 LINE L2 3143 3246 -26 253 248 32 91 chr10 115270569 115270728 -25046037 + MLT1H LTR MaLR 355 473 -76 2934 250 41 4 chr10 115270730 115271515 -25045250 + L1ME1 LINE L1 3621 4434 -1712 1729 139 0 88 chr10 115271527 115271858 -25044907 - MER50 LTR ERV1 0 734 433 1223 141 84 0 chr10 115271859 115272024 -25044741 - MER50 LTR ERV1 -503 231 43 441 76 0 0 chr10 115272024 115272090 -25044675 + (TG)n Simple_repeat Simple_repeat 2 67 0 1223 141 84 0 chr10 115272090 115272137 -25044628 - MER50 LTR ERV1 -691 43 1 1570 212 103 18 chr10 115272137 115272585 -25044180 + L1ME1 LINE L1 4443 4928 -1218 2416 128 16 8 chr10 115272590 115272966 -25043799 + MLT1B LTR MaLR 1 379 -11 3236 225 66 34 chr10 115272983 115273467 -25043298 + L1ME1 LINE L1 4929 5396 -770 180 0 0 0 chr10 115273467 115273487 -25043278 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3236 225 66 34 chr10 115273487 115274182 -25042583 + L1ME1 LINE L1 5396 6161 -5 221 289 0 19 chr10 115274469 115274521 -25042244 + L3 LINE CR1 1438 1488 -89 217 313 41 75 chr10 115274557 115274704 -25042061 - MIR3 SINE MIR -40 168 27 1139 130 25 10 chr10 115274841 115275041 -25041724 - L1MA8 LINE L1 -4 6287 6085 2335 84 0 39 chr10 115275075 115275385 -25041380 - AluSc SINE Alu -11 298 1 3612 143 34 51 chr10 115275443 115276143 -25040622 - L1MA8 LINE L1 -218 6073 5386 8636 123 24 5 chr10 115276149 115276722 -25040043 + Tigger1 DNA MER2_type 1 562 -1856 2122 121 0 13 chr10 115276722 115277020 -25039745 + AluSg SINE Alu 1 294 -16 8636 123 24 5 chr10 115277020 115278120 -25038645 + Tigger1 DNA MER2_type 562 1772 -646 308 277 85 43 chr10 115278588 115278729 -25038036 + MIR3 SINE MIR 48 194 -14 528 255 138 8 chr10 115278866 115279105 -25037660 - LTR50 LTR ERVL -81 714 445 663 223 124 33 chr10 115279129 115279371 -25037394 - LTR50 LTR ERVL -505 290 27 381 284 172 6 chr10 115279417 115279586 -25037179 + MER117 DNA MER1_type 1 197 0 775 338 149 11 chr10 115279839 115280310 -25036455 - L3 LINE CR1 -112 1465 930 1926 211 73 47 chr10 115281337 115281829 -25034936 - MLT1D LTR MaLR 0 505 1 419 235 43 17 chr10 115282227 115282342 -25034423 - MIR SINE MIR -33 229 112 273 167 0 0 chr10 115282605 115282653 -25034112 + MER5B DNA MER1_type 1 48 -130 275 106 43 21 chr10 115282657 115282704 -25034061 - Alu SINE Alu -10 292 245 472 88 0 0 chr10 115283206 115283263 -25033502 + AluSq/x SINE Alu 75 131 -181 2196 124 0 3 chr10 115283803 115284117 -25032648 + AluSq SINE Alu 1 313 0 325 212 16 138 chr10 115285036 115285225 -25031540 - L1MEc LINE L1 -6194 202 37 2334 104 0 0 chr10 115285242 115285540 -25031225 - AluSc SINE Alu -11 298 1 323 238 0 0 chr10 115286096 115286159 -25030606 + L2 LINE L2 3210 3272 0 17997 54 1 4 chr10 115287043 115289256 -25027509 + L1P LINE L1 1 2206 -3940 261 0 0 0 chr10 115289814 115289843 -25026922 + (TG)n Simple_repeat Simple_repeat 2 30 0 430 335 112 10 chr10 115290665 115290871 -25025894 - MIR SINE MIR -16 246 20 317 333 27 33 chr10 115291391 115291541 -25025224 + MIR3 SINE MIR 15 163 -45 311 287 60 30 chr10 115291575 115291742 -25025023 + L1ME3A LINE L1 5976 6147 -23 493 293 143 36 chr10 115292550 115292943 -25023822 + L1ME3 LINE L1 5511 5945 -217 2038 125 3 16 chr10 115293000 115293304 -25023461 + AluSx SINE Alu 1 300 -12 36 23 0 0 chr10 115293482 115293525 -25023240 + AT_rich Low_complexity Low_complexity 1 43 0 329 208 48 115 chr10 115293551 115293582 -25023183 - L2 LINE L2 -1 3271 3239 1445 140 74 8 chr10 115293582 115293825 -25022940 - L1PA16 LINE L1 0 6166 5908 329 208 48 115 chr10 115293825 115293945 -25022820 - L2 LINE L2 -33 3239 3126 383 262 82 92 chr10 115294832 115295016 -25021749 - MIR3 SINE MIR -41 221 42 391 302 160 0 chr10 115296359 115296528 -25020237 + MIR SINE MIR 66 261 -1 911 187 74 30 chr10 115298769 115299014 -25017751 - L1MA3 LINE L1 -473 5832 5579 1143 163 20 15 chr10 115299017 115299213 -25017552 + AluJb SINE Alu 1 197 -115 387 295 10 7 chr10 115299213 115299358 -25017407 - L1MC/D LINE L1 -598 5568 5426 11670 174 89 15 chr10 115299378 115299722 -25017043 - L1PB1 LINE L1 -27 6840 6523 342 0 0 0 chr10 115299722 115299760 -25017005 + (TA)n Simple_repeat Simple_repeat 1 38 0 11670 174 89 15 chr10 115299760 115302410 -25014355 - L1PB1 LINE L1 -344 6523 4071 1490 111 5 0 chr10 115302410 115302608 -25014157 - AluSg/x SINE Alu -26 284 86 11670 174 89 15 chr10 115302608 115304775 -25011990 - L1PB1 LINE L1 -2796 4071 995 234 167 0 0 chr10 115304775 115304823 -25011942 - L1PB1 LINE L1 -6669 194 147 428 338 48 14 chr10 115305159 115305366 -25011399 + MIR SINE MIR 47 260 -2 1011 216 58 52 chr10 115305735 115305842 -25010923 - L1MC4 LINE L1 -375 7667 7562 2506 66 7 0 chr10 115305842 115306144 -25010621 - AluY SINE Alu -7 304 1 1011 216 58 52 chr10 115306144 115306379 -25010386 - L1MC4 LINE L1 -480 7562 7323 29 0 0 0 chr10 115306518 115306547 -25010218 + AT_rich Low_complexity Low_complexity 1 29 0 329 281 74 58 chr10 115306736 115306978 -25009787 - L1ME4a LINE L1 -144 5977 5732 230 306 51 41 chr10 115307743 115307841 -25008924 - MIR3 SINE MIR -22 186 88 2336 75 0 19 chr10 115307845 115308152 -25008613 - AluY SINE Alu -10 301 1 2385 102 19 16 chr10 115308481 115308854 -25007911 + THE1C LTR MaLR 1 374 -1 803 187 60 55 chr10 115309488 115309723 -25007042 - MER106A DNA MER1_type 0 236 1 1294 90 12 0 chr10 115309731 115309981 -25006784 + L1MA3 LINE L1 5511 5832 -473 440 276 74 37 chr10 115310270 115310433 -25006332 - MIR SINE MIR -3 259 91 974 60 0 0 chr10 115310465 115310581 -25006184 - AluSp/q SINE Alu -9 304 189 6180 101 31 7 chr10 115310811 115311809 -25004956 - L1MA3 LINE L1 0 6305 5284 * 11470 168 22 10 chr10 115311788 115313870 -25002895 - L1M1 LINE L1 -5458 2107 1 440 284 68 6 chr10 115313882 115314044 -25002721 + MIR SINE MIR 88 259 -3 215 225 0 0 chr10 115314065 115314105 -25002660 - L3 LINE CR1 -112 1465 1426 512 199 112 52 chr10 115314521 115314854 -25001911 - LTR16A LTR ERVL 0 450 1 729 196 22 87 chr10 115316840 115317024 -24999741 - MER58A DNA MER1_type -51 173 2 6172 21 0 0 chr10 115317097 115317806 -24998959 + L1PA3 LINE L1 5447 6155 0 1536 189 0 4 chr10 115317914 115318163 -24998602 + AluJo SINE Alu 60 307 -5 1431 218 91 0 chr10 115319414 115319744 -24997021 + MER77 LTR ERV1 236 595 -10 492 328 66 10 chr10 115319803 115320001 -24996764 + MIR SINE MIR 48 256 -6 547 298 133 31 chr10 115320250 115320789 -24995976 - L2 LINE L2 -54 3259 2680 396 311 53 63 chr10 115320796 115320986 -24995779 - MIR3 SINE MIR -12 196 9 223 336 179 9 chr10 115322817 115323036 -24993729 + L2 LINE L2 2768 3019 -253 804 345 122 30 chr10 115323137 115323800 -24992965 - L2 LINE L2 -375 2939 2216 438 344 66 4 chr10 115323808 115324052 -24992713 - L2 LINE L2 -2190 1124 866 256 294 35 12 chr10 115325420 115325505 -24991260 - MIR SINE MIR -174 88 2 190 389 108 5 chr10 115325573 115325776 -24990989 - L2 LINE L2 -348 2966 2743 1799 124 23 0 chr10 115325854 115326113 -24990652 + AluSg SINE Alu 21 285 -25 356 298 0 0 chr10 115327017 115327121 -24989644 - LTR16A1 LTR ERVL -350 107 4 497 317 90 63 chr10 115329087 115329586 -24987179 - L2 LINE L2 -36 3236 2730 374 317 110 13 chr10 115331440 115331627 -24985138 - MIR SINE MIR -46 216 15 785 221 49 117 chr10 115332257 115332583 -24984182 + MLT1E LTR MaLR 66 369 -224 309 309 71 8 chr10 115332698 115332824 -24983941 + MIR SINE MIR 73 206 -56 878 211 128 18 chr10 115333093 115333512 -24983253 - MLT1E LTR MaLR 0 593 139 294 285 65 118 chr10 115334443 115334483 -24982282 + MIR SINE MIR 55 96 -166 1731 127 8 0 chr10 115334483 115334727 -24982038 + AluSx SINE Alu 59 304 -8 294 285 65 118 chr10 115334727 115334872 -24981893 + MIR SINE MIR 96 230 -32 438 300 124 74 chr10 115335777 115335920 -24980845 + MLT1K LTR MaLR 27 161 -427 368 251 96 30 chr10 115335920 115336087 -24980678 - MER5B DNA MER1_type 0 178 1 438 300 124 74 chr10 115336087 115336427 -24980338 + MLT1K LTR MaLR 161 534 -54 196 358 80 25 chr10 115336568 115336730 -24980035 - MIR3 SINE MIR -7 201 31 5687 145 23 6 chr10 115336810 115338017 -24978748 - L1MA6 LINE L1 -3 6297 5071 228 111 0 0 chr10 115338077 115338113 -24978652 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 240 302 13 87 chr10 115338317 115338466 -24978299 + MIR SINE MIR 14 151 -111 858 280 73 19 chr10 115338682 115338996 -24977769 + MER102b DNA MER1_type 1 331 -10 192 77 0 0 chr10 115339069 115339095 -24977670 + (CA)n Simple_repeat Simple_repeat 1 26 0 245 233 0 17 chr10 115340150 115340222 -24976543 + (TA)n Simple_repeat Simple_repeat 1 70 0 361 96 109 0 chr10 115340362 115340518 -24976247 + (TA)n Simple_repeat Simple_repeat 1 173 0 406 120 78 6 chr10 115340560 115340727 -24976038 + (TA)n Simple_repeat Simple_repeat 1 179 0 306 85 96 0 chr10 115340798 115340892 -24975873 + (TA)n Simple_repeat Simple_repeat 1 103 0 2413 120 6 0 chr10 115341089 115341438 -24975327 - THE1A LTR MaLR 0 355 5 11655 99 2 0 chr10 115341442 115343018 -24973747 - THE1A-int LTR MaLR 0 1580 1 2446 114 8 0 chr10 115343018 115343370 -24973395 - THE1A LTR MaLR 0 355 1 199 49 49 24 chr10 115343375 115343416 -24973349 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 590 210 144 41 chr10 115343439 115343682 -24973083 + L1ME3A LINE L1 5782 6049 -121 874 200 38 0 chr10 115343684 115343919 -24972846 + L1ME2 LINE L1 2690 2933 -3213 30 69 0 0 chr10 115343980 115344038 -24972727 + AT_rich Low_complexity Low_complexity 1 58 0 43252 41 21 2 chr10 115344352 115350375 -24966390 - L1PA3 LINE L1 0 6155 13 589 217 5 43 chr10 115350700 115350907 -24965858 + L1ME2 LINE L1 2943 3141 -3005 12973 219 21 5 chr10 115350922 115350960 -24965805 + L1PA15 LINE L1 1864 1900 -4246 234 0 0 0 chr10 115350960 115350986 -24965779 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 12973 219 21 5 chr10 115350986 115353921 -24962844 + L1PA15 LINE L1 1900 4884 -1262 5532 151 22 5 chr10 115353922 115355128 -24961637 + L1PA15 LINE L1 4940 6163 -2 37 0 0 0 chr10 115355153 115355190 -24961575 + AT_rich Low_complexity Low_complexity 1 37 0 4040 239 93 13 chr10 115355200 115356438 -24960327 + L1ME2 LINE L1 3863 5199 -947 1684 176 59 18 chr10 115357265 115357708 -24959057 + L1ME2 LINE L1 5188 5643 -523 2213 143 28 25 chr10 115357708 115358065 -24958700 - THE1B LTR MaLR 0 364 7 11983 89 4 8 chr10 115358065 115359221 -24957544 - THE1B-int LTR MaLR -8 1572 422 2200 116 10 0 chr10 115359221 115359514 -24957251 + AluSp SINE Alu 1 296 -17 11983 89 4 8 chr10 115359514 115359935 -24956830 - THE1B-int LTR MaLR -1158 422 1 2523 113 30 25 chr10 115359935 115360297 -24956468 - THE1B LTR MaLR 0 364 1 1902 218 41 31 chr10 115360297 115360750 -24956015 + L1ME2 LINE L1 5642 6102 -62 1822 138 4 15 chr10 115360750 115361019 -24955746 + AluSx SINE Alu 33 298 -14 1902 218 41 31 chr10 115361019 115361074 -24955691 + L1ME2 LINE L1 6102 6155 -9 235 301 14 14 chr10 115362042 115362115 -24954650 - L3 LINE CR1 -3 1574 1502 44044 30 21 1 chr10 115363018 115369050 -24947715 - L1HS LINE L1 -1 6154 1 235 301 14 14 chr10 115369904 115369977 -24946788 - L3 LINE CR1 -3 1574 1502 210 314 137 32 chr10 115370691 115370815 -24945950 - L2 LINE L2 -2 3270 3134 579 207 103 0 chr10 115370886 115371002 -24945763 - FLAM_A SINE Alu -5 128 1 350 349 86 0 chr10 115372010 115372162 -24944603 - L2 LINE L2 -4 3268 3104 641 104 0 47 chr10 115373394 115373500 -24943265 - LTR43 LTR ERV1 0 602 502 243 194 57 69 chr10 115373571 115373746 -24943019 + (CTAGT)n Simple_repeat Simple_repeat 2 174 0 3599 118 10 0 chr10 115373830 115374340 -24942425 - LTR43 LTR ERV1 -87 515 1 2252 191 54 50 chr10 115374620 115375158 -24941607 - MER92C LTR ERV1 -2 552 13 216 0 0 0 chr10 115375280 115375304 -24941461 + (TC)n Simple_repeat Simple_repeat 1 24 0 316 198 58 47 chr10 115376035 115376121 -24940644 + L2 LINE L2 3227 3313 0 43477 37 22 2 chr10 115376410 115382437 -24934328 + L1PA3 LINE L1 1 6146 -9 21 36 0 0 chr10 115382438 115382466 -24934299 + AT_rich Low_complexity Low_complexity 1 28 0 657 196 21 101 chr10 115382834 115382955 -24933810 + MER5B DNA MER1_type 1 103 -75 2843 107 14 0 chr10 115382955 115383321 -24933444 - THE1C LTR MaLR -2 373 3 657 196 21 101 chr10 115383321 115383388 -24933377 + MER5B DNA MER1_type 103 174 -4 238 266 47 0 chr10 115383662 115383726 -24933039 - L2 LINE L2 0 3313 3247 197 320 13 40 chr10 115383816 115383891 -24932874 - L2 LINE L2 -220 3052 2980 443 321 118 40 chr10 115383977 115384326 -24932439 + L2 LINE L2 2892 3267 -5 32 81 0 0 chr10 115384327 115384401 -24932364 + AT_rich Low_complexity Low_complexity 1 74 0 231 250 66 0 chr10 115384407 115384483 -24932282 - L1MEc LINE L1 -5456 940 860 53 40 0 0 chr10 115384488 115384562 -24932203 + AT_rich Low_complexity Low_complexity 1 74 0 363 366 6 23 chr10 115384563 115384738 -24932027 + L2 LINE L2 2688 2859 -455 410 284 92 24 chr10 115384746 115384996 -24931769 + L1MEc LINE L1 674 940 -5456 * 455 234 78 50 chr10 115384982 115385200 -24931565 + L1MEc LINE L1 2099 2322 -4074 300 286 184 30 chr10 115386167 115386335 -24930430 + MIR3 SINE MIR 1 194 -14 422 141 13 13 chr10 115386670 115386748 -24930017 + L1M4 LINE L1 5632 5709 -465 540 295 55 104 chr10 115388439 115388853 -24927912 - L2 LINE L2 -33 3239 2865 2346 85 0 0 chr10 115388853 115389146 -24927619 + AluSx SINE Alu 1 293 -19 540 295 55 104 chr10 115389146 115389307 -24927458 - L2 LINE L2 -407 2865 2698 2117 124 3 0 chr10 115390244 115390687 -24926078 + AluSp SINE Alu 1 444 0 227 290 97 11 chr10 115391574 115391667 -24925098 + L2 LINE L2 3137 3237 -35 2062 121 21 0 chr10 115391693 115391974 -24924791 + AluSg SINE Alu 1 287 -23 283 258 72 21 chr10 115392270 115392367 -24924398 - L3 LINE CR1 -149 1428 1327 385 227 16 62 chr10 115392375 115392503 -24924262 + L2 LINE L2 3192 3313 0 356 266 92 27 chr10 115392510 115392694 -24924071 - L3 LINE CR1 -251 1326 1131 190 282 57 89 chr10 115392760 115392884 -24923881 + L2 LINE L2 3148 3267 -5 260 161 16 0 chr10 115393127 115393189 -24923576 + (CA)n Simple_repeat Simple_repeat 1 63 0 393 170 64 0 chr10 115393292 115393386 -24923379 + LTR37A LTR ERV1 327 426 0 234 238 48 16 chr10 115393528 115393591 -24923174 - MIR SINE MIR -81 181 117 412 290 73 8 chr10 115393677 115393801 -24922964 - MIR SINE MIR -129 133 2 309 51 0 0 chr10 115394115 115394154 -24922611 + (CA)n Simple_repeat Simple_repeat 1 39 0 455 374 48 18 chr10 115394439 115394920 -24921845 - L2 LINE L2 -212 3060 2569 727 295 45 12 chr10 115395077 115395321 -24921444 - MIR SINE MIR -9 253 2 307 259 203 42 chr10 115395543 115395686 -24921079 - MIR SINE MIR -85 177 12 500 285 8 0 chr10 115395772 115395902 -24920863 + MER94 DNA DNA 4 134 0 205 184 102 0 chr10 115396109 115396158 -24920607 + L2 LINE L2 3209 3262 -10 521 277 29 0 chr10 115396604 115396741 -24920024 + MIR3 SINE MIR 35 175 -33 731 278 62 8 chr10 115396808 115397067 -24919698 - L1ME3A LINE L1 -32 6138 5866 270 136 0 0 chr10 115397542 115397586 -24919179 + (GGAGA)n Simple_repeat Simple_repeat 4 47 0 260 170 0 19 chr10 115399015 115399068 -24917697 + LTR67 LTR ERVL 492 543 -14 710 285 20 68 chr10 115399900 115400149 -24916616 + MIR SINE MIR 23 259 -3 1347 98 0 5 chr10 115400833 115401027 -24915738 - AluSp SINE Alu -1 312 120 1890 137 3 40 chr10 115401240 115401562 -24915203 + AluSx SINE Alu 1 310 -2 2924 129 12 22 chr10 115401815 115402305 -24914460 + MER31A LTR ERV1 1 485 0 198 295 114 47 chr10 115402872 115403021 -24913744 + L2 LINE L2 3109 3267 -5 259 170 0 0 chr10 115403630 115403677 -24913088 + HsTC2 DNA Tc2 29 75 -1823 * 265 169 92 15 chr10 115403672 115403737 -24913028 + HsTC2 DNA Tc2 1220 1289 -609 359 115 0 0 chr10 115403744 115403796 -24912969 + L1MB8 LINE L1 6119 6170 -8 358 294 175 6 chr10 115403873 115404050 -24912715 - MIR SINE MIR -53 209 3 4428 148 53 73 chr10 115404152 115404803 -24911962 + L1MC3 LINE L1 5732 6394 -1391 2275 64 0 3 chr10 115404803 115405099 -24911666 + AluY SINE Alu 1 295 -16 4428 148 53 73 chr10 115405099 115405378 -24911387 + L1MC3 LINE L1 6394 6643 -1142 207 100 0 0 chr10 115405378 115405408 -24911357 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 4428 148 53 73 chr10 115405408 115405492 -24911273 + L1MC3 LINE L1 6643 6727 -1058 1303 119 0 0 chr10 115405492 115405694 -24911071 - AluSq SINE Alu 0 308 107 1019 96 0 0 chr10 115405695 115405831 -24910934 - AluSq/x SINE Alu -177 136 1 4042 142 154 82 chr10 115405833 115405973 -24910792 + L1MC3 LINE L1 6719 6848 -937 342 0 0 0 chr10 115405973 115406011 -24910754 + (CA)n Simple_repeat Simple_repeat 2 39 0 4042 142 154 82 chr10 115406011 115406208 -24910557 + L1MC3 LINE L1 6848 7030 -755 238 228 63 25 chr10 115406208 115406287 -24910478 + MLT1F1 LTR MaLR 36 117 -450 4042 142 154 82 chr10 115406287 115406866 -24909899 + L1MC3 LINE L1 7030 7785 0 648 276 67 35 chr10 115406988 115407214 -24909551 - MIR SINE MIR -3 259 25 244 261 31 0 chr10 115407252 115407317 -24909448 - L2 LINE L2 0 3313 3247 1972 122 0 14 chr10 115407713 115408029 -24908736 - AluSg SINE Alu 0 310 1 881 158 0 0 chr10 115408140 115408273 -24908492 + FRAM SINE Alu 13 145 -31 748 159 14 22 chr10 115408641 115408779 -24907986 + BC200 scRNA scRNA 1 137 -63 4454 56 6 0 chr10 115408980 115409530 -24907235 - L1PA8 LINE L1 -3 6169 5617 507 314 85 89 chr10 115409625 115410404 -24906361 - HAL1b LINE L1 -891 1159 710 9825 142 96 16 chr10 115412565 115414350 -24902415 + L1M4c LINE L1 14 1941 -4443 1147 277 52 3 chr10 115414640 115414947 -24901818 - LTR16C LTR ERVL -21 470 149 272 326 76 15 chr10 115420062 115420194 -24896571 - MER5B DNA MER1_type 0 178 39 555 60 0 0 chr10 115420462 115420529 -24896236 + U4 snRNA snRNA 1 67 -78 639 269 108 12 chr10 115420879 115421214 -24895551 + L1ME4a LINE L1 5751 6117 -4 572 207 17 17 chr10 115421554 115421670 -24895095 + L3 LINE CR1 1282 1397 -180 250 188 219 31 chr10 115421863 115421959 -24894806 - MIR SINE MIR -71 137 24 599 259 189 0 chr10 115422780 115422992 -24893773 - MIR SINE MIR -5 257 6 184 274 167 59 chr10 115423001 115423103 -24893662 - MIR SINE MIR -113 149 37 304 244 268 10 chr10 115423308 115423514 -24893251 - MIR SINE MIR -6 256 6 3661 162 24 5 chr10 115424094 115424765 -24892000 + L1MB7 LINE L1 5501 6184 0 2300 55 3 3 chr10 115425273 115425562 -24891203 + AluY SINE Alu 1 289 -22 495 194 20 0 chr10 115426238 115426336 -24890429 + L1MC4 LINE L1 7943 8042 0 1898 151 0 7 chr10 115427787 115428085 -24888680 + AluJo SINE Alu 1 296 -16 365 276 98 34 chr10 115428946 115429211 -24887554 + L1ME4a LINE L1 5625 5906 -215 1574 161 53 17 chr10 115429211 115429510 -24887255 + AluJb SINE Alu 1 310 -2 32 0 0 0 chr10 115429534 115429566 -24887199 + AT_rich Low_complexity Low_complexity 1 32 0 2429 66 0 0 chr10 115429567 115429872 -24886893 + AluY SINE Alu 1 305 -6 2055 107 0 0 chr10 115429898 115430206 -24886559 + AluSg SINE Alu 3 310 0 212 154 0 26 chr10 115432513 115432552 -24884213 + MIR SINE MIR 109 146 -62 318 191 86 86 chr10 115432576 115432728 -24884037 + MER113 DNA MER1_type? 2 153 -368 526 289 124 59 chr10 115433348 115434215 -24882550 + L2 LINE L2 2347 3265 -7 416 255 123 45 chr10 115435633 115436065 -24880700 + L1ME4a LINE L1 5543 6113 -8 184 262 184 29 chr10 115437055 115437158 -24879607 + MIR SINE MIR 24 142 -66 449 244 35 9 chr10 115437216 115437331 -24879434 - L2 LINE L2 -36 3277 3160 284 282 153 0 chr10 115437675 115437760 -24879005 + L2 LINE L2 3170 3267 -5 1618 164 4 4 chr10 115439817 115440091 -24876674 - AluSx SINE Alu -8 304 31 506 255 59 0 chr10 115440882 115441035 -24875730 + Charlie7 DNA MER1_type 3 164 -2448 414 0 0 0 chr10 115441169 115441215 -24875550 + (TG)n Simple_repeat Simple_repeat 1 46 0 306 73 0 0 chr10 115441215 115441256 -24875509 + (GA)n Simple_repeat Simple_repeat 2 42 0 227 303 45 0 chr10 115441637 115441726 -24875039 + L1ME LINE L1 5802 5894 -227 430 266 55 0 chr10 115441743 115441871 -24874894 - MIR SINE MIR -38 224 90 260 250 16 0 chr10 115442071 115442135 -24874630 + MIR SINE MIR 81 145 -63 225 376 0 32 chr10 115443735 115443860 -24872905 - L2 LINE L2 -25 3247 3127 678 182 8 8 chr10 115444401 115444522 -24872243 - MIR SINE MIR -140 122 2 313 226 70 61 chr10 115444578 115444693 -24872072 - MIR SINE MIR -127 135 20 1950 136 3 19 chr10 115444867 115445184 -24871581 + AluJb SINE Alu 1 312 0 196 318 16 0 chr10 115445321 115445384 -24871381 + MIR SINE MIR 78 141 -67 780 291 174 7 chr10 115446358 115446842 -24869923 + L2 LINE L2 2513 3078 -235 1504 209 30 0 chr10 115446886 115447187 -24869578 - AluJb SINE Alu -1 311 2 1233 125 173 0 chr10 115447410 115447618 -24869147 + MLT1D LTR MaLR 262 505 0 578 229 126 6 chr10 115447695 115447878 -24868887 - Charlie8 DNA MER1_type -2170 247 43 497 220 45 68 chr10 115448132 115448277 -24868488 - MIR SINE MIR -70 192 50 2256 119 0 0 chr10 115448277 115448572 -24868193 - AluSx SINE Alu -17 295 1 497 220 45 68 chr10 115448572 115448603 -24868162 - MIR SINE MIR -212 50 20 353 244 189 0 chr10 115448773 115448900 -24867865 + MIR SINE MIR 52 202 -60 510 290 98 34 chr10 115449767 115450178 -24866587 + MLT1J2 LTR MaLR 1 443 -7 4241 39 44 6 chr10 115451521 115452040 -24864725 + L1PA5 LINE L1 5612 6150 -4 581 130 26 43 chr10 115452204 115452319 -24864446 + Charlie5 DNA MER1_type 11 123 -2489 1666 173 65 8 chr10 115452321 115452690 -24864075 + Charlie5 DNA MER1_type 2234 2623 0 557 220 32 115 chr10 115452897 115453115 -24863650 - MIR SINE MIR -56 206 7 2114 130 3 3 chr10 115454464 115454763 -24862002 - AluSx SINE Alu -13 299 1 542 205 17 8 chr10 115455112 115455229 -24861536 - MER103 DNA DNA 0 166 49 4490 156 35 19 chr10 115455230 115455832 -24860933 + L1MB2 LINE L1 5324 5944 -227 2174 99 3 17 chr10 115455832 115456126 -24860639 - AluSg SINE Alu -20 290 1 4490 156 35 19 chr10 115456126 115456357 -24860408 + L1MB2 LINE L1 5944 6170 -1 249 146 0 0 chr10 115456797 115456845 -24859920 + (CA)n Simple_repeat Simple_repeat 1 48 0 2093 128 3 0 chr10 115458941 115459239 -24857526 + AluSc SINE Alu 1 299 -10 343 253 48 45 chr10 115459271 115459439 -24857326 + HAL1b LINE L1 1191 1338 -10 2442 80 0 3 chr10 115459607 115459908 -24856857 + AluY SINE Alu 1 300 -11 3619 146 16 45 chr10 115460399 115460885 -24855880 - L1MC1 LINE L1 -1 6332 5872 2283 111 3 0 chr10 115460885 115461183 -24855582 + AluSp SINE Alu 1 299 -14 3619 146 16 45 chr10 115461183 115461400 -24855365 - L1MC1 LINE L1 -461 5872 5650 727 172 47 23 chr10 115461904 115462032 -24854733 - FLAM_A SINE Alu -2 131 1 264 204 0 0 chr10 115462352 115462401 -24854364 - MER5B DNA MER1_type -84 94 46 337 220 30 20 chr10 115463247 115463347 -24853418 + MIR SINE MIR 162 262 0 512 263 95 11 chr10 115464135 115464314 -24852451 - MIR SINE MIR -48 214 21 201 195 0 24 chr10 115464509 115464550 -24852215 + CT-rich Low_complexity Low_complexity 2 41 0 2448 66 3 3 chr10 115465137 115465438 -24851327 + AluSp SINE Alu 1 301 -12 425 250 61 28 chr10 115466116 115466296 -24850469 - L1MEd LINE L1 -5294 825 640 283 279 0 0 chr10 115466448 115466527 -24850238 - L1MEd LINE L1 -5917 202 124 1057 273 57 59 chr10 115466530 115467086 -24849679 - L2 LINE L2 -1 3312 2767 2505 177 40 55 chr10 115467271 115468547 -24848218 + L1MB8 LINE L1 3665 4959 -1219 1505 130 0 5 chr10 115468547 115468762 -24848003 + AluJb SINE Alu 95 308 -4 1830 158 7 3 chr10 115468764 115469056 -24847709 + AluJb SINE Alu 3 295 -17 2505 177 40 55 chr10 115469056 115469102 -24847663 + L1MB8 LINE L1 4960 5005 -1173 2333 55 0 0 chr10 115469102 115469374 -24847391 + AluY SINE Alu 1 272 -39 986 97 0 29 chr10 115469382 115469557 -24847208 + (GGAA)n Simple_repeat Simple_repeat 3 172 0 2505 177 40 55 chr10 115469557 115470375 -24846390 + L1MB8 LINE L1 5012 5837 -341 2472 84 0 10 chr10 115470375 115470686 -24846079 + AluSc SINE Alu 2 309 0 2505 177 40 55 chr10 115470686 115471022 -24845743 + L1MB8 LINE L1 5837 6177 -1 1743 177 0 30 chr10 115471169 115471468 -24845297 - AluJo SINE Alu -22 290 1 206 313 152 10 chr10 115471483 115471582 -24845183 - MIR3 SINE MIR -51 157 45 436 314 29 29 chr10 115471777 115471952 -24844813 - MIR3 SINE MIR -10 198 24 967 272 137 28 chr10 115472275 115472705 -24844060 + MLT1K LTR MaLR 11 487 -101 217 224 17 0 chr10 115474112 115474170 -24842595 + (CGGG)n Simple_repeat Simple_repeat 4 62 0 21 36 0 0 chr10 115474195 115474223 -24842542 + GC_rich Low_complexity Low_complexity 1 28 0 1030 258 131 45 chr10 115474600 115475520 -24841245 + L2 LINE L2 2306 3313 0 322 309 0 0 chr10 115475526 115475607 -24841158 + L2 LINE L2 3153 3233 -39 1996 104 66 3 chr10 115476127 115476414 -24840351 - AluSq SINE Alu -8 305 1 401 322 17 23 chr10 115476589 115476766 -24839999 - MIR SINE MIR -81 181 6 189 254 0 63 chr10 115476752 115476815 -24839950 - L3 LINE CR1 -13 1564 1506 * 2448 179 29 16 chr10 115476906 115477359 -24839406 + MLT1C LTR MaLR 6 464 -3 296 273 45 23 chr10 115477671 115477803 -24838962 + MLT1K LTR MaLR 377 511 -77 2539 77 0 0 chr10 115477911 115478222 -24838543 - AluY SINE Alu 0 311 1 1823 171 0 4 chr10 115478299 115478580 -24838185 - AluJo SINE Alu -30 282 3 2073 113 0 37 chr10 115479853 115480153 -24836612 - AluSx SINE Alu 0 312 24 4655 153 34 31 chr10 115480175 115481160 -24835605 - L1MB8 LINE L1 -1 6177 5188 347 339 79 26 chr10 115481205 115481221 -24835544 + MER102a DNA MER1_type 91 105 -1312 2323 93 3 3 chr10 115481221 115481531 -24835234 + AluSp SINE Alu 4 313 0 347 339 79 26 chr10 115481531 115481741 -24835024 + MER102a DNA MER1_type 105 329 -1 2969 172 37 30 chr10 115482374 115482498 -24834267 - L1MB8 LINE L1 0 6178 6056 2358 109 0 0 chr10 115482498 115482810 -24833955 - AluSx SINE Alu 0 312 1 2969 172 37 30 chr10 115482810 115483326 -24833439 - L1MB8 LINE L1 -122 6056 5533 414 293 80 21 chr10 115483625 115483813 -24832952 - MIR3 SINE MIR -4 204 6 339 298 78 58 chr10 115483922 115484024 -24832741 + MER102a DNA MER1_type 22 121 -220 2463 68 0 0 chr10 115484024 115484320 -24832445 + AluY SINE Alu 1 296 -15 339 298 78 58 chr10 115484320 115484422 -24832343 + MER102a DNA MER1_type 121 230 -111 251 230 54 40 chr10 115484421 115484495 -24832270 + MER102a DNA MER1_type 255 329 -1 * 576 295 54 12 chr10 115485208 115485449 -24831316 + MIR SINE MIR 12 262 0 282 218 0 0 chr10 115485498 115485553 -24831212 - MIR3 SINE MIR -3 205 151 1876 153 72 38 chr10 115486199 115486696 -24830069 + L1MA9 LINE L1 5718 6266 -46 2715 52 0 0 chr10 115487026 115487336 -24829429 - AluY SINE Alu -1 310 1 992 141 14 73 chr10 115487369 115487589 -24829176 - L1MA9 LINE L1 -318 5994 5788 240 217 0 0 chr10 115487654 115487700 -24829065 - MIR SINE MIR -9 253 208 301 319 88 22 chr10 115487840 115488022 -24828743 + L2 LINE L2 3054 3247 -25 261 200 0 0 chr10 115488212 115488257 -24828508 - L2 LINE L2 -16 3256 3212 671 251 76 28 chr10 115488619 115488910 -24827855 - L2 LINE L2 -8 3305 3001 1736 185 20 10 chr10 115489502 115489805 -24826960 + AluJo SINE Alu 1 306 -6 184 317 73 8 chr10 115489946 115490069 -24826696 + MIR3 SINE MIR 61 191 -17 1607 252 73 14 chr10 115490098 115490602 -24826163 + L1ME3A LINE L1 5631 6164 -6 307 284 40 7 chr10 115490595 115490743 -24826022 + L1M4 LINE L1 5015 5167 -979 * 636 322 0 5 chr10 115490841 115491040 -24825725 - MIR SINE MIR -34 228 31 871 224 36 0 chr10 115491584 115491780 -24824985 + MER3 DNA MER1_type 1 203 -6 2036 121 7 0 chr10 115492646 115492918 -24823847 + AluSx SINE Alu 17 290 -22 270 116 0 0 chr10 115492918 115492961 -24823804 + (GA)n Simple_repeat Simple_repeat 1 43 0 698 18 9 54 chr10 115492961 115493072 -24823693 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 2328 131 40 47 chr10 115493576 115494005 -24822760 - MSTB LTR MaLR 0 426 1 2291 89 0 0 chr10 115494436 115494447 -24822318 - AluY SINE Alu -19 292 282 324 0 0 0 chr10 115494447 115494483 -24822282 + (TG)n Simple_repeat Simple_repeat 1 36 0 2291 89 0 0 chr10 115494483 115494763 -24822002 - AluY SINE Alu -28 283 1 410 288 125 86 chr10 115495164 115495667 -24821098 + MLT1K LTR MaLR 30 552 -36 893 133 105 7 chr10 115495674 115495817 -24820948 + Tigger1 DNA MER2_type 1 157 -2261 * 1326 142 24 0 chr10 115495806 115496018 -24820747 + Tigger1 DNA MER2_type 2202 2418 0 21 0 0 0 chr10 115496197 115496218 -24820547 + AT_rich Low_complexity Low_complexity 1 21 0 1462 304 25 44 chr10 115496770 115497358 -24819407 + MLT1K LTR MaLR 4 580 -8 307 221 32 4 chr10 115497759 115497853 -24818912 - MIR SINE MIR -65 143 80 2174 89 0 34 chr10 115498668 115498993 -24817772 + AluY SINE Alu 1 315 0 594 269 38 21 chr10 115499243 115499429 -24817336 - MIR SINE MIR -39 223 35 215 138 0 0 chr10 115499503 115499532 -24817233 - L2 LINE L2 -37 3235 3207 239 258 0 16 chr10 115500350 115500412 -24816353 - MLT1K LTR MaLR -345 243 183 918 156 0 78 chr10 115500504 115500709 -24816056 - MER53 DNA DNA 0 189 1 462 213 50 78 chr10 115501770 115501911 -24814854 + MER112 DNA MER1_type 115 251 -9 503 242 13 74 chr10 115502234 115502298 -24814467 + MER91C DNA MER1_type 1 67 -73 2255 93 0 39 chr10 115502298 115502610 -24814155 + AluSg SINE Alu 1 300 -10 503 242 13 74 chr10 115502610 115502694 -24814071 + MER91C DNA MER1_type 67 140 0 207 0 0 0 chr10 115503225 115503248 -24813517 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 926 226 0 0 chr10 115503824 115504005 -24812760 + AluJo SINE Alu 127 307 -5 210 37 0 0 chr10 115504005 115504032 -24812733 + (GA)n Simple_repeat Simple_repeat 2 28 0 1229 260 69 27 chr10 115504309 115504713 -24812052 - MLT1J2 LTR MaLR -21 429 9 2656 164 83 0 chr10 115505266 115505517 -24811248 - LTR54 LTR ERV1 0 510 281 1493 150 4 0 chr10 115505517 115505743 -24811022 - AluJo SINE Alu -2 310 84 2656 164 83 0 chr10 115505743 115505962 -24810803 - LTR54 LTR ERV1 -229 281 1 213 157 59 0 chr10 115506353 115506404 -24810361 + T-rich Low_complexity Low_complexity 2 55 0 812 279 105 37 chr10 115506795 115507146 -24809619 - MLT1J2 LTR MaLR -2 448 74 1336 213 0 4 chr10 115507198 115507423 -24809342 + MER58A DNA MER1_type 1 224 0 889 186 47 98 chr10 115507436 115507710 -24809055 + MLT1K LTR MaLR 327 586 -2 2377 166 10 17 chr10 115509192 115509608 -24807157 - MLT2C2 LTR ERVL -48 416 4 737 205 43 97 chr10 115510731 115510848 -24805917 - MIR SINE MIR 0 262 140 2306 89 3 3 chr10 115510848 115511150 -24805615 - AluY SINE Alu -9 302 1 737 205 43 97 chr10 115511150 115511231 -24805534 - MIR SINE MIR -122 140 79 750 197 21 64 chr10 115511231 115511419 -24805346 + MER104 DNA MER2_type 1 180 0 737 205 43 97 chr10 115511419 115511477 -24805288 - MIR SINE MIR -183 79 19 357 43 0 0 chr10 115511983 115512030 -24804735 + (TG)n Simple_repeat Simple_repeat 2 48 0 554 259 120 17 chr10 115513066 115513279 -24803486 + MIR SINE MIR 2 232 -30 2125 125 0 28 chr10 115513606 115513927 -24802838 - AluSq SINE Alu -1 312 1 216 216 39 0 chr10 115514146 115514197 -24802568 + L2 LINE L2 3028 3080 -192 583 110 0 5 chr10 115514314 115514438 -24802327 - MER53 DNA DNA -1 188 3 548 289 30 60 chr10 115514732 115514868 -24801897 + MIR SINE MIR 60 190 -72 1979 137 0 20 chr10 115514868 115515174 -24801591 + AluJb SINE Alu 1 300 -12 548 289 30 60 chr10 115515174 115515238 -24801527 + MIR SINE MIR 190 254 -8 2465 77 0 0 chr10 115515574 115515874 -24800891 - AluSc SINE Alu -9 300 1 432 190 209 81 chr10 115516534 115516617 -24800148 + L1MC5 LINE L1 7623 7694 -267 2140 117 0 3 chr10 115516617 115516908 -24799857 - AluSx SINE Alu -22 290 1 432 190 209 81 chr10 115516908 115517082 -24799683 + L1MC5 LINE L1 7694 7913 -48 225 184 0 41 chr10 115518444 115518493 -24798272 - MER5B DNA MER1_type -126 52 6 223 184 20 0 chr10 115519191 115519240 -24797525 + (CA)n Simple_repeat Simple_repeat 1 50 0 50 59 0 0 chr10 115519338 115519423 -24797342 + AT_rich Low_complexity Low_complexity 1 85 0 355 354 36 47 chr10 115519429 115519621 -24797144 + MIR SINE MIR 28 217 -45 489 251 90 90 chr10 115521033 115521193 -24795572 + MIR SINE MIR 1 163 -99 2084 67 94 0 chr10 115521193 115521460 -24795305 + AluSx SINE Alu 1 292 -20 489 251 90 90 chr10 115521460 115521522 -24795243 + MIR SINE MIR 162 223 -39 1014 192 63 24 chr10 115521601 115521856 -24794909 - L1MD3 LINE L1 -1 7994 7730 535 193 0 0 chr10 115521971 115522059 -24794706 - FLAM_C SINE Alu -30 113 26 508 226 212 0 chr10 115523008 115523154 -24793611 + MER5A DNA MER1_type 12 188 -1 1123 243 222 43 chr10 115523176 115523613 -24793152 - LTR33 LTR ERVL -6 515 1 620 249 61 73 chr10 115523950 115524211 -24792554 + MIR SINE MIR 2 259 -3 2367 56 0 46 chr10 115524566 115524870 -24791895 + AluY SINE Alu 1 290 -21 2402 66 0 25 chr10 115524882 115525199 -24791566 + AluY SINE Alu 1 309 -2 191 36 36 0 chr10 115525839 115525867 -24790898 + (GAA)n Simple_repeat Simple_repeat 2 30 0 221 289 46 92 chr10 115526763 115526915 -24789850 + MIR SINE MIR 1 145 -117 284 285 172 20 chr10 115526943 115527094 -24789671 + MER5B DNA MER1_type 3 176 -2 24 0 0 0 chr10 115527207 115527231 -24789534 + AT_rich Low_complexity Low_complexity 1 24 0 451 274 260 5 chr10 115527407 115527611 -24789154 - MIR SINE MIR 0 262 7 425 311 11 53 chr10 115527722 115527912 -24788853 + MER5A DNA MER1_type 8 189 0 975 198 211 59 chr10 115528479 115528917 -24787848 - L1ME2 LINE L1 -1 6177 5722 1586 65 90 0 chr10 115529674 115529875 -24786890 + L1PA10 LINE L1 5939 6157 -11 24 0 0 0 chr10 115529875 115529899 -24786866 + AT_rich Low_complexity Low_complexity 1 24 0 644 197 0 138 chr10 115530719 115530937 -24785828 + MIR SINE MIR 74 261 -1 23 0 0 0 chr10 115530950 115530973 -24785792 + AT_rich Low_complexity Low_complexity 1 23 0 366 253 189 58 chr10 115531729 115531919 -24784846 + MIR SINE MIR 12 226 -36 1789 117 23 23 chr10 115532001 115532265 -24784500 + AluSg SINE Alu 32 295 -15 3711 132 36 3 chr10 115533199 115533776 -24782989 + L1MB2 LINE L1 5572 6167 -4 23 0 0 0 chr10 115533777 115533800 -24782965 + AT_rich Low_complexity Low_complexity 1 23 0 513 47 0 0 chr10 115533883 115533947 -24782818 + (TTTTA)n Simple_repeat Simple_repeat 3 66 0 1813 146 15 0 chr10 115533952 115534226 -24782539 - AluJb SINE Alu -34 278 1 2404 140 62 15 chr10 115534629 115535029 -24781736 + MLT1C LTR MaLR 3 421 -46 2083 125 0 0 chr10 115535205 115535514 -24781251 - AluSx SINE Alu 0 309 1 6003 81 13 8 chr10 115535566 115536701 -24780064 - L1PB1 LINE L1 0 6151 5020 3339 194 9 0 chr10 115536702 115537373 -24779392 + L1PB1 LINE L1 4342 5018 -1128 1010 147 0 0 chr10 115537457 115537607 -24779158 + AluSq/x SINE Alu 1 150 -163 271 295 71 9 chr10 115537629 115537741 -24779024 - L1ME2 LINE L1 -2107 5701 5583 463 261 85 13 chr10 115537745 115537898 -24778867 + MIR SINE MIR 25 188 -74 184 313 70 47 chr10 115538016 115538144 -24778621 - L2 LINE L2 -1 3271 3141 316 344 95 0 chr10 115539118 115539307 -24777458 + L2 LINE L2 2545 2751 -563 870 223 17 43 chr10 115539470 115539703 -24777062 + L1ME3A LINE L1 5944 6170 0 325 296 128 44 chr10 115539756 115539959 -24776806 + L2 LINE L2 2840 3059 -213 307 215 15 15 chr10 115540145 115540210 -24776555 - Charlie4a DNA MER1_type 0 508 444 2025 117 7 3 chr10 115540212 115540502 -24776263 - AluSq SINE Alu -20 293 3 798 129 9 0 chr10 115540522 115540638 -24776127 - AluSg/x SINE Alu -6 303 187 1583 203 124 10 chr10 115540659 115541063 -24775702 - L1ME3A LINE L1 -38 6132 5683 1648 196 99 5 chr10 115541076 115541489 -24775276 - Charlie4a DNA MER1_type -55 453 2 218 352 102 19 chr10 115541492 115541600 -24775165 + L2 LINE L2 3150 3266 -6 619 306 91 5 chr10 115541614 115541823 -24774942 - MIR SINE MIR -1 261 35 195 204 0 0 chr10 115541888 115541932 -24774833 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 440 238 71 123 chr10 115542603 115543109 -24773656 - L1ME4a LINE L1 -2 6119 5639 351 306 28 58 chr10 115543714 115543756 -24773009 - MIR SINE MIR -14 248 206 2397 72 0 7 chr10 115543756 115544060 -24772705 - AluY SINE Alu -9 302 1 351 306 28 58 chr10 115544060 115544268 -24772497 - MIR SINE MIR -56 206 2 213 333 14 0 chr10 115544276 115544345 -24772420 + L3 LINE CR1 1306 1375 -202 196 315 0 55 chr10 115544372 115544445 -24772320 + L3 LINE CR1 1463 1531 -46 294 268 37 0 chr10 115544482 115544564 -24772201 - MIR SINE MIR -115 147 63 2376 70 3 7 chr10 115544832 115545131 -24771634 - AluY SINE Alu -13 298 1 2374 171 78 14 chr10 115546025 115546459 -24770306 - LTR32 LTR ERVL 0 471 10 740 233 48 29 chr10 115546460 115546666 -24770099 + MIR SINE MIR 53 262 0 22 0 0 0 chr10 115546790 115546812 -24769953 + AT_rich Low_complexity Low_complexity 1 22 0 252 250 62 42 chr10 115547634 115547730 -24769035 - LTR67 LTR ERVL -21 536 439 280 244 37 128 chr10 115548404 115548568 -24768197 + MER5A DNA MER1_type 41 189 0 338 246 54 98 chr10 115548588 115548791 -24767974 - L2 LINE L2 -16 3297 3104 * 1192 293 110 26 chr10 115548790 115549693 -24767072 + L2 LINE L2 2329 3312 -1 511 263 99 6 chr10 115550145 115550316 -24766449 + MIR SINE MIR 72 258 -4 28 61 0 0 chr10 115550335 115550384 -24766381 + AT_rich Low_complexity Low_complexity 1 49 0 2369 100 0 0 chr10 115550535 115550834 -24765931 - AluSx SINE Alu -12 300 2 296 203 16 16 chr10 115551077 115551141 -24765624 - L2 LINE L2 -1 3312 3249 748 273 39 26 chr10 115551306 115551537 -24765228 + MIR SINE MIR 29 262 0 356 237 141 58 chr10 115551657 115551748 -24765017 - MIR SINE MIR -33 229 147 2086 146 0 0 chr10 115551748 115552049 -24764716 + AluJb SINE Alu 1 301 -11 356 237 141 58 chr10 115552049 115552113 -24764652 - MIR SINE MIR -115 147 61 181 217 65 0 chr10 115552222 115552268 -24764497 + MER5B DNA MER1_type 10 58 -120 280 344 23 16 chr10 115552298 115552440 -24764325 - MER5B DNA MER1_type -45 133 1 1668 123 4 0 chr10 115552626 115552854 -24763911 + AluSq SINE Alu 1 229 -84 2363 72 0 3 chr10 115552897 115553189 -24763576 - AluY SINE Alu -20 291 1 228 35 0 0 chr10 115553918 115553947 -24762818 + (TG)n Simple_repeat Simple_repeat 1 29 0 569 266 5 84 chr10 115554104 115554318 -24762447 - MIR SINE MIR -45 217 21 1426 65 0 0 chr10 115554868 115555036 -24761729 + AluY SINE Alu 1 168 -143 3390 116 94 7 chr10 115555137 115555202 -24761563 + Tigger1 DNA MER2_type 1830 1888 -530 1484 170 79 11 chr10 115555202 115555479 -24761286 + AluJb SINE Alu 1 296 -16 3390 116 94 7 chr10 115555479 115555955 -24760810 + Tigger1 DNA MER2_type 1888 2418 0 1350 167 28 28 chr10 115555955 115556237 -24760528 - L1 LINE L1 -765 5381 5100 202 292 21 52 chr10 115556257 115556353 -24760412 + MIR SINE MIR 169 261 -1 385 307 77 122 chr10 115557257 115558486 -24758279 + L2 LINE L2 1787 2959 -355 224 196 43 0 chr10 115558651 115558697 -24758068 + L2 LINE L2 3180 3227 -86 1534 122 13 13 chr10 115558697 115558926 -24757839 - L1PA8A LINE L1 0 6131 5903 2239 102 0 0 chr10 115559228 115559521 -24757244 - AluSg SINE Alu -2 308 16 1305 197 80 70 chr10 115560098 115560484 -24756281 + MLT1B LTR MaLR 1 390 0 605 285 104 0 chr10 115561632 115561825 -24754940 + MIR SINE MIR 49 261 -1 218 352 102 19 chr10 115561839 115561947 -24754818 - L2 LINE L2 -6 3266 3150 1648 196 99 5 chr10 115561950 115562363 -24754402 + Charlie4a DNA MER1_type 2 453 -55 1583 203 124 10 chr10 115562376 115562780 -24753985 + L1ME3A LINE L1 5683 6132 -38 798 129 9 0 chr10 115562801 115562917 -24753848 + AluSg/x SINE Alu 187 303 -6 2060 118 7 0 chr10 115562937 115563226 -24753539 + AluSq SINE Alu 3 293 -20 307 215 15 15 chr10 115563228 115563293 -24753472 + Charlie4a DNA MER1_type 444 508 0 325 296 128 44 chr10 115563479 115563682 -24753083 - L2 LINE L2 -213 3059 2840 870 223 17 43 chr10 115563735 115563968 -24752797 - L1ME3A LINE L1 0 6170 5944 316 344 95 0 chr10 115564131 115564320 -24752445 - L2 LINE L2 -563 2751 2545 184 313 70 47 chr10 115565295 115565423 -24751342 + L2 LINE L2 3141 3271 -1 463 261 85 13 chr10 115565541 115565694 -24751071 - MIR SINE MIR -74 188 25 271 295 71 9 chr10 115565698 115565810 -24750955 + L1ME2 LINE L1 5583 5701 -2107 1010 147 0 0 chr10 115565832 115565982 -24750783 - AluSq/x SINE Alu -162 150 1 3339 194 9 0 chr10 115566066 115566737 -24750028 - L1PB1 LINE L1 -1128 5018 4342 6003 81 46 55 chr10 115566738 115567873 -24748892 + L1PB1 LINE L1 5020 6151 0 2084 125 0 0 chr10 115567925 115568234 -24748531 + AluSx SINE Alu 1 309 0 2404 140 62 15 chr10 115568410 115568810 -24747955 - MLT1C LTR MaLR -46 421 3 1813 146 15 0 chr10 115569213 115569487 -24747278 + AluJb SINE Alu 1 278 -34 513 47 0 0 chr10 115569492 115569556 -24747209 + (TAAAA)n Simple_repeat Simple_repeat 3 66 0 23 0 0 0 chr10 115569639 115569662 -24747103 + AT_rich Low_complexity Low_complexity 1 23 0 3711 132 36 3 chr10 115569663 115570240 -24746525 - L1MB2 LINE L1 -4 6167 5572 1789 117 23 23 chr10 115571174 115571438 -24745327 - AluSg SINE Alu -15 295 32 366 253 189 58 chr10 115571520 115571710 -24745055 - MIR SINE MIR -36 226 12 23 0 0 0 chr10 115572466 115572489 -24744276 + AT_rich Low_complexity Low_complexity 1 23 0 644 197 0 138 chr10 115572502 115572720 -24744045 - MIR SINE MIR -1 261 74 24 0 0 0 chr10 115573540 115573564 -24743201 + AT_rich Low_complexity Low_complexity 1 24 0 1586 65 90 0 chr10 115573564 115573765 -24743000 - L1PA10 LINE L1 -11 6157 5939 1002 200 207 58 chr10 115574522 115574961 -24741804 + L1ME2 LINE L1 5722 6177 -1 425 311 11 53 chr10 115575528 115575718 -24741047 - MER5A DNA MER1_type 0 189 8 451 274 260 5 chr10 115575829 115576033 -24740732 + MIR SINE MIR 7 262 0 24 0 0 0 chr10 115576209 115576233 -24740532 + AT_rich Low_complexity Low_complexity 1 24 0 284 285 172 20 chr10 115576346 115576497 -24740268 - MER5B DNA MER1_type -2 176 3 221 289 46 92 chr10 115576525 115576677 -24740088 - MIR SINE MIR -117 145 1 191 36 36 0 chr10 115577573 115577601 -24739164 + (TTC)n Simple_repeat Simple_repeat 2 30 0 2402 66 0 25 chr10 115578241 115578558 -24738207 - AluY SINE Alu -2 309 1 2327 72 0 3 chr10 115578570 115578861 -24737904 - AluY SINE Alu -21 290 1 228 35 0 0 chr10 115579590 115579619 -24737146 + (TG)n Simple_repeat Simple_repeat 1 29 0 569 266 5 84 chr10 115579776 115579990 -24736775 - MIR SINE MIR -45 217 21 1685 81 50 0 chr10 115580540 115580761 -24736004 + AluY SINE Alu 1 232 -79 290 47 47 0 chr10 115580761 115580804 -24735961 - AluSq/x SINE Alu -166 137 93 264 128 0 0 chr10 115580905 115580944 -24735821 + AluSc SINE Alu 189 227 -72 1159 80 0 0 chr10 115580945 115581083 -24735682 - AluSc SINE Alu -171 138 1 309 273 34 11 chr10 115581087 115581175 -24735590 - MIR3 SINE MIR -37 171 82 2493 67 0 0 chr10 115581536 115581833 -24734932 - AluSg1 SINE Alu -11 298 2 25 0 0 0 chr10 115582064 115582089 -24734676 + AT_rich Low_complexity Low_complexity 1 25 0 390 115 0 0 chr10 115582449 115582510 -24734255 + (CTG)n Simple_repeat Simple_repeat 1 61 0 487 160 351 32 chr10 115587090 115587278 -24729487 - MIR SINE MIR -2 260 13 858 113 15 23 chr10 115589238 115589371 -24727394 - FLAM_A SINE Alu 0 133 2 1972 123 0 20 chr10 115589558 115589878 -24726887 - AluSx SINE Alu 0 312 1 2361 78 3 13 chr10 115590994 115591302 -24725463 - AluSp SINE Alu -8 305 1 1624 77 0 5 chr10 115591358 115591566 -24725199 - AluSc SINE Alu -20 289 83 2371 81 3 0 chr10 115591853 115592148 -24724617 - AluY SINE Alu -14 297 2 354 236 169 0 chr10 115593565 115593654 -24723111 - MIR SINE MIR -154 108 5 2359 101 3 3 chr10 115594720 115595027 -24721738 + AluSx SINE Alu 1 307 -5 2481 68 0 0 chr10 115595822 115596129 -24720636 - AluY SINE Alu -4 307 1 1241 247 107 16 chr10 115596650 115597023 -24719742 - L2 LINE L2 0 3313 2907 1286 236 179 11 chr10 115597048 115597505 -24719260 - L2 LINE L2 -556 2758 2225 3229 142 51 50 chr10 115597725 115598368 -24718397 + L1MB7 LINE L1 5541 6184 0 280 54 0 0 chr10 115598933 115598970 -24717795 - L1MB7 LINE L1 -16 6168 6132 23 68 0 0 chr10 115598973 115599017 -24717748 + AT_rich Low_complexity Low_complexity 1 44 0 232 305 93 26 chr10 115599214 115599365 -24717400 - L2 LINE L2 -178 3094 2934 221 270 206 26 chr10 115599395 115599628 -24717137 - L2 LINE L2 -456 2858 2584 1547 133 91 18 chr10 115599654 115599939 -24716826 + MLT1A1 LTR MaLR 60 365 0 1818 119 25 0 chr10 115600363 115600649 -24716116 + L1PA16 LINE L1 5865 6157 -9 1500 130 130 22 chr10 115601400 115601670 -24715095 - AluSg1 SINE Alu -10 299 1 46 33 0 0 chr10 115601773 115601833 -24714932 + AT_rich Low_complexity Low_complexity 1 60 0 236 374 48 20 chr10 115602097 115602244 -24714521 - MIR3 SINE MIR -57 151 1 2484 69 7 0 chr10 115602749 115603054 -24713711 - AluSp SINE Alu -6 307 1 637 147 181 8 chr10 115603865 115604120 -24712645 - Charlie5 DNA MER1_type -10 2602 5 507 262 60 42 chr10 115604480 115604648 -24712117 + MIR SINE MIR 81 251 -11 2237 85 34 3 chr10 115604766 115605059 -24711706 + AluSx SINE Alu 1 302 -10 1605 80 5 0 chr10 115605351 115605551 -24711214 - AluSp SINE Alu -10 303 103 2539 66 3 0 chr10 115606528 115606830 -24709935 + AluSp SINE Alu 1 303 -10 691 174 52 7 chr10 115607110 115607265 -24709500 + MER33 DNA MER1_type 11 172 -152 2183 99 10 7 chr10 115607482 115607785 -24708980 + AluSp SINE Alu 3 306 -7 526 294 111 21 chr10 115607788 115608023 -24708742 - MIR SINE MIR -4 258 3 434 188 70 8 chr10 115608317 115608445 -24708320 - L1MA8 LINE L1 -44 6247 6112 203 280 0 0 chr10 115608907 115608957 -24707808 + A-rich Low_complexity Low_complexity 1 50 0 200 295 74 42 chr10 115609087 115609182 -24707583 + MIR SINE MIR 3 100 -162 21 0 0 0 chr10 115610129 115610150 -24706615 + AT_rich Low_complexity Low_complexity 1 21 0 258 265 52 44 chr10 115610400 115610536 -24706229 - MER103 DNA DNA -9 157 21 54 16 0 0 chr10 115610913 115610974 -24705791 + AT_rich Low_complexity Low_complexity 1 61 0 736 208 27 0 chr10 115612110 115612259 -24704506 - MER5A DNA MER1_type -1 188 36 2147 107 7 3 chr10 115612357 115612655 -24704110 + AluSx SINE Alu 2 300 -12 2285 74 27 0 chr10 115612862 115613158 -24703607 - AluY SINE Alu -7 304 1 279 231 132 44 chr10 115613591 115613682 -24703083 - MIR3 SINE MIR -35 173 75 2258 106 3 3 chr10 115613809 115614111 -24702654 + AluSx SINE Alu 1 302 -10 262 206 32 87 chr10 115614218 115614271 -24702494 - L1ME4a LINE L1 -1 6120 6066 2422 78 3 10 chr10 115614271 115614580 -24702185 + AluSp SINE Alu 1 307 -6 262 206 32 87 chr10 115614580 115614652 -24702113 - L1ME4a LINE L1 -55 6066 6002 257 238 82 57 chr10 115614766 115614888 -24701877 - MLT1J2 LTR MaLR -153 297 173 374 261 116 86 chr10 115615152 115615455 -24701310 + L1ME4a LINE L1 5602 5913 -208 1676 245 40 42 chr10 115616083 115616626 -24700139 - MLT1F LTR MaLR 0 542 1 434 292 115 5 chr10 115617067 115617259 -24699506 - L2 LINE L2 -530 2784 2572 558 122 0 0 chr10 115617402 115617509 -24699256 + (TC)n Simple_repeat Simple_repeat 1 107 0 342 321 51 51 chr10 115617570 115617844 -24698921 - L2 LINE L2 -925 2389 2116 367 264 0 0 chr10 115617953 115618025 -24698740 + MIR SINE MIR 82 153 -55 28 29 0 0 chr10 115619012 115619047 -24697718 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 115619355 115619377 -24697388 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 115619449 115619471 -24697294 + AT_rich Low_complexity Low_complexity 1 22 0 293 362 132 11 chr10 115620171 115620345 -24696420 - L2 LINE L2 0 3272 3078 2153 106 17 0 chr10 115620413 115620706 -24696059 + AluSg SINE Alu 1 298 -12 2355 97 0 3 chr10 115621560 115621858 -24694907 + AluSg SINE Alu 1 297 -13 3620 156 74 1 chr10 115621967 115622672 -24694093 + Tigger2 DNA MER2_type 2 757 -1961 1059 96 112 84 chr10 115622726 115622976 -24693789 + Tigger2 DNA MER2_type 2461 2717 -1 569 293 39 11 chr10 115623116 115623297 -24693468 + MIR SINE MIR 75 260 -2 318 182 284 0 chr10 115623815 115623903 -24692862 + MIR SINE MIR 28 140 -68 260 276 23 26 chr10 115623956 115624040 -24692725 + MER5A DNA MER1_type 63 140 -38 1944 127 44 41 chr10 115624456 115624818 -24691947 + THE1B LTR MaLR 1 363 -1 11348 95 9 11 chr10 115624819 115626093 -24690672 + THE1B-int LTR MaLR 1 1273 -307 2614 40 0 0 chr10 115626093 115626393 -24690372 + AluY SINE Alu 1 300 -11 11348 95 9 11 chr10 115626393 115626701 -24690064 + THE1B-int LTR MaLR 1273 1580 0 2057 113 68 37 chr10 115626701 115626994 -24689771 + THE1B LTR MaLR 1 308 -56 2166 113 7 7 chr10 115626994 115627295 -24689470 - AluSx SINE Alu -6 306 6 2057 113 68 37 chr10 115627295 115627354 -24689411 + THE1B LTR MaLR 308 364 0 235 207 184 0 chr10 115627381 115627468 -24689297 + L1MC4a LINE L1 5493 5595 -526 1371 187 36 6 chr10 115627478 115627810 -24688955 + L1M3 LINE L1 4821 5162 -984 487 170 85 9 chr10 115627807 115627913 -24688852 + L1M3 LINE L1 5494 5607 -573 * 454 303 27 16 chr10 115627962 115628150 -24688615 + L1MC4a LINE L1 5712 5901 -1907 1614 166 36 23 chr10 115628285 115628586 -24688179 - AluJb SINE Alu -7 305 1 1605 136 136 30 chr10 115628801 115629102 -24687663 + MER1B DNA MER1_type 1 333 -4 302 271 130 42 chr10 115630249 115630441 -24686324 + L1ME LINE L1 5521 5729 -392 2180 95 0 64 chr10 115630920 115631098 -24685667 - AluSg SINE Alu -3 307 158 2310 77 0 7 chr10 115631098 115631398 -24685367 - AluY SINE Alu -10 301 4 2180 95 0 64 chr10 115631398 115631546 -24685219 - AluSg SINE Alu -152 158 2 293 300 90 0 chr10 115632114 115632214 -24684551 + MIR3 SINE MIR 15 123 -85 405 233 12 0 chr10 115633863 115633949 -24682816 - AluJ/FLAM SINE Alu -225 87 1 597 240 29 6 chr10 115633972 115634143 -24682622 - MER5B DNA MER1_type -3 175 1 280 235 157 39 chr10 115634170 115634272 -24682493 + L2 LINE L2 3200 3313 0 2040 129 0 14 chr10 115635676 115635971 -24680794 + AluSx SINE Alu 1 291 -21 2079 95 23 30 chr10 115635973 115636278 -24680487 + AluSg SINE Alu 1 303 -7 333 243 84 47 chr10 115637416 115637523 -24679242 + MIR3 SINE MIR 82 192 -16 544 310 6 35 chr10 115638230 115638401 -24678364 - MIR3 SINE MIR -10 198 33 742 192 0 0 chr10 115638431 115638561 -24678204 + AluJ SINE Alu 1 130 -172 1849 89 0 146 chr10 115638567 115638917 -24677848 + AluSp SINE Alu 1 299 -4 912 154 12 19 chr10 115638919 115639081 -24677684 + AluJ SINE Alu 135 295 -17 2099 236 56 75 chr10 115640137 115640210 -24676555 - L1ME3A LINE L1 -5 6234 6161 446 33 17 0 chr10 115640210 115640270 -24676495 + (TA)n Simple_repeat Simple_repeat 2 62 0 2099 236 56 75 chr10 115640270 115641120 -24675645 - L1ME3A LINE L1 -78 6161 5328 1270 154 70 0 chr10 115641346 115641547 -24675218 + AluJb SINE Alu 85 299 -13 247 235 47 12 chr10 115641679 115641764 -24675001 - L1ME3A LINE L1 -4750 1646 1559 255 177 0 0 chr10 115641961 115642023 -24674742 + CT-rich Low_complexity Low_complexity 1 62 0 2368 100 0 0 chr10 115642026 115642326 -24674439 - AluSx SINE Alu -12 300 1 362 270 99 9 chr10 115642326 115642437 -24674328 - L1ME3A LINE L1 -5031 1174 1054 516 271 49 0 chr10 115642569 115642713 -24674052 - L1ME3A LINE L1 -5549 656 506 1914 120 32 3 chr10 115642735 115643019 -24673746 - AluSc SINE Alu -17 292 1 1151 171 21 2 chr10 115644811 115645086 -24671679 - MER2 DNA MER2_type 0 345 1 1888 153 3 3 chr10 115645281 115645575 -24671190 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr10 115646922 115646946 -24669819 + AT_rich Low_complexity Low_complexity 1 24 0 427 211 122 0 chr10 115647778 115647901 -24668864 + L1MB1 LINE L1 6031 6168 0 2319 78 0 13 chr10 115648543 115648849 -24667916 - AluY SINE Alu -9 302 1 454 224 93 50 chr10 115649554 115649618 -24667147 + MIR SINE MIR 52 112 -150 2511 71 0 0 chr10 115649618 115649926 -24666839 - AluY SINE Alu -3 308 1 454 224 93 50 chr10 115649926 115650022 -24666743 + MIR SINE MIR 112 219 -43 204 231 0 19 chr10 115653849 115653901 -24662864 + T-rich Low_complexity Low_complexity 4 54 0 295 293 24 12 chr10 115654810 115654892 -24661873 + MIR3 SINE MIR 105 187 -21 279 0 0 0 chr10 115656006 115656037 -24660728 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 315 0 0 0 chr10 115656036 115656071 -24660694 + (TG)n Simple_repeat Simple_repeat 1 35 0 1007 90 15 0 chr10 115656213 115656347 -24660418 - AluSq/x SINE Alu -177 136 1 266 253 40 40 chr10 115656347 115656446 -24660319 - L1ME LINE L1 -333 5829 5731 420 281 25 16 chr10 115656724 115656845 -24659920 + MIR3 SINE MIR 75 196 -12 215 366 12 0 chr10 115657776 115657858 -24658907 - L2 LINE L2 -5 3267 3185 24 0 0 0 chr10 115657946 115657970 -24658795 + AT_rich Low_complexity Low_complexity 1 24 0 1847 65 0 0 chr10 115659824 115660053 -24656712 + AluY SINE Alu 81 309 -2 297 311 0 57 chr10 115661084 115661206 -24655559 + MIR3 SINE MIR 88 202 -6 2270 98 3 3 chr10 115662334 115662640 -24654125 + AluSp SINE Alu 1 306 -7 2167 117 0 3 chr10 115662640 115662940 -24653825 + AluSc SINE Alu 1 299 -10 1972 151 107 21 chr10 115662946 115663330 -24653435 + MSTA LTR MaLR 1 417 -11 2060 133 0 16 chr10 115663532 115663840 -24652925 - AluSx SINE Alu -7 305 3 1668 180 78 56 chr10 115664302 115664752 -24652013 - MLT1C LTR MaLR 0 467 8 25 0 0 0 chr10 115665672 115665697 -24651068 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 115665767 115665788 -24650977 + AT_rich Low_complexity Low_complexity 1 21 0 294 118 15 29 chr10 115666185 115666253 -24650512 + (TA)n Simple_repeat Simple_repeat 1 67 0 2127 128 0 10 chr10 115666723 115667027 -24649738 - AluSx SINE Alu -11 301 1 23 33 0 0 chr10 115667150 115667180 -24649585 + AT_rich Low_complexity Low_complexity 1 30 0 5026 159 60 11 chr10 115667887 115669234 -24647531 + L1PA16 LINE L1 4739 6151 -15 29 0 0 0 chr10 115669260 115669289 -24647476 + AT_rich Low_complexity Low_complexity 1 29 0 235 188 78 16 chr10 115669304 115669368 -24647397 + MIR SINE MIR 118 185 -77 2005 139 4 0 chr10 115669384 115669665 -24647100 - AluSx SINE Alu -30 282 1 617 119 127 34 chr10 115670361 115670479 -24646286 - MER44D DNA MER2_type -210 399 1 2184 172 62 31 chr10 115671707 115672189 -24644576 - L1MB7 LINE L1 0 6184 5688 1957 215 50 7 chr10 115672187 115672643 -24644122 + L1MD1 LINE L1 5717 6192 -50 * 24 0 0 0 chr10 115672644 115672668 -24644097 + AT_rich Low_complexity Low_complexity 1 24 0 530 247 28 2 chr10 115673178 115673308 -24643457 - MLT1H LTR MaLR -368 181 34 307 376 34 13 chr10 115674059 115674208 -24642557 - L2 LINE L2 -4 3268 3117 415 328 8 8 chr10 115674287 115674415 -24642350 - MIR SINE MIR -4 258 131 23 33 0 0 chr10 115674509 115674539 -24642226 + AT_rich Low_complexity Low_complexity 1 30 0 2369 76 0 3 chr10 115674539 115674828 -24641937 - AluY SINE Alu -23 288 1 452 149 0 0 chr10 115674831 115674905 -24641860 - L1MC4 LINE L1 -454 7588 7515 2064 103 10 7 chr10 115675388 115675680 -24641085 - AluSg SINE Alu -17 293 1 1747 156 0 32 chr10 115675699 115675982 -24640783 - AluJb SINE Alu -38 274 1 603 212 129 10 chr10 115676191 115676384 -24640381 - MER112 DNA MER1_type 0 260 45 464 153 0 0 chr10 115676749 115676821 -24639944 + AluJ/FLAM SINE Alu 1 72 -240 2226 115 0 10 chr10 115676821 115677125 -24639640 + AluSg SINE Alu 1 301 -9 1994 139 3 10 chr10 115678109 115678411 -24638354 + AluJb SINE Alu 1 300 -12 1772 157 7 11 chr10 115679089 115679370 -24637395 + AluJo SINE Alu 11 290 -22 25 31 0 0 chr10 115779655 115779687 -24537078 + AT_rich Low_complexity Low_complexity 1 32 0 699 175 0 8 chr10 115779691 115779811 -24536954 - FLAM_C SINE Alu -23 120 2 228 366 15 15 chr10 115780258 115780389 -24536376 - L2 LINE L2 -468 2846 2716 676 256 36 79 chr10 115780437 115780780 -24535985 + L2 LINE L2 2327 3313 0 228 284 18 0 chr10 115781540 115781649 -24535116 - L1ME4a LINE L1 -40 6081 5971 211 207 49 24 chr10 115781687 115781769 -24534996 + (TA)n Simple_repeat Simple_repeat 1 84 0 243 200 95 57 chr10 115781769 115781874 -24534891 - L1ME4a LINE L1 -157 5964 5856 638 312 10 15 chr10 115782069 115782271 -24534494 - MIR3 SINE MIR -3 205 5 729 265 44 8 chr10 115782427 115782662 -24534103 + MIR SINE MIR 20 261 -1 2196 87 0 7 chr10 115783001 115783299 -24533466 - AluSx SINE Alu -16 296 1 1304 193 53 13 chr10 115783317 115783617 -24533148 + AluJo SINE Alu 1 312 0 3964 226 65 61 chr10 115783618 115783693 -24533072 + L1M4 LINE L1 2327 2400 -3746 860 152 8 0 chr10 115783693 115783825 -24532940 + FLAM_C SINE Alu 1 133 0 3964 226 65 61 chr10 115783825 115784501 -24532264 + L1M4 LINE L1 2400 3072 -3074 2175 88 23 7 chr10 115784501 115784806 -24531959 + AluY SINE Alu 1 310 -1 3964 226 65 61 chr10 115784806 115785141 -24531624 + L1M4 LINE L1 3072 3404 -2742 2018 131 0 19 chr10 115785141 115785454 -24531311 + AluSx SINE Alu 1 307 -5 3964 226 65 61 chr10 115785454 115785779 -24530986 + L1M4 LINE L1 3404 3746 -2400 1758 112 0 0 chr10 115785904 115786155 -24530610 - AluY SINE Alu -60 251 1 201 283 142 26 chr10 115786195 115786308 -24530457 - MIR SINE MIR -75 187 62 241 240 83 99 chr10 115786351 115786472 -24530293 + L2 LINE L2 3153 3271 -1 251 266 57 32 chr10 115786905 115787029 -24529736 - MIR3 SINE MIR -71 137 11 190 329 27 0 chr10 115787107 115787180 -24529585 - L3 LINE CR1 -235 1342 1268 498 314 38 0 chr10 115787497 115787706 -24529059 - MIR SINE MIR -1 261 44 323 259 54 9 chr10 115787732 115787844 -24528921 - LTR33 LTR ERVL 0 521 405 788 237 130 19 chr10 115787915 115788177 -24528588 - LTR33 LTR ERVL -229 292 2 223 345 53 0 chr10 115788610 115788723 -24528042 - L2 LINE L2 -18 3254 3136 2702 171 52 2 chr10 115788783 115789304 -24527461 + L1MB7 LINE L1 5284 5830 -354 1809 131 21 14 chr10 115790121 115790412 -24526353 + AluJb SINE Alu 1 293 -19 21 57 0 0 chr10 115790415 115790450 -24526315 + AT_rich Low_complexity Low_complexity 1 35 0 2121 134 3 27 chr10 115790573 115790839 -24525926 + L1MB7 LINE L1 5813 6069 -115 2401 123 10 31 chr10 115790839 115791222 -24525543 - THE1C LTR MaLR 0 375 1 2121 134 3 27 chr10 115791222 115791320 -24525445 + L1MB7 LINE L1 6069 6168 -16 22 0 0 0 chr10 115791323 115791345 -24525420 + AT_rich Low_complexity Low_complexity 1 22 0 236 167 58 0 chr10 115791380 115791500 -24525265 + (TA)n Simple_repeat Simple_repeat 1 127 0 490 248 19 68 chr10 115791561 115791722 -24525043 - L2 LINE L2 -219 3053 2901 224 213 21 0 chr10 115793266 115793313 -24523452 + GA-rich Low_complexity Low_complexity 2 49 0 693 224 141 0 chr10 115794312 115794482 -24522283 + MIR SINE MIR 60 253 -9 1621 81 14 0 chr10 115794842 115795063 -24521702 + AluSp SINE Alu 82 305 -8 371 318 53 21 chr10 115795717 115795906 -24520859 + L2 LINE L2 2911 3105 -167 389 332 61 10 chr10 115795944 115796140 -24520625 - LTR16C LTR ERVL 0 491 286 332 282 29 10 chr10 115797016 115797119 -24519646 - MIR SINE MIR 0 262 158 231 302 16 0 chr10 115797388 115797451 -24519314 + MIR SINE MIR 33 96 -112 606 268 68 24 chr10 115797499 115797704 -24519061 - MIR SINE MIR -1 261 48 823 148 55 26 chr10 115797792 115798144 -24518621 + LTR7 LTR ERV1 1 450 0 1357 128 42 26 chr10 115798183 115798448 -24518317 - L1MB4 LINE L1 0 6180 5912 297 51 0 0 chr10 115798448 115798487 -24518278 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2739 61 0 0 chr10 115798499 115798843 -24517922 - L1PA7 LINE L1 -6 6148 5805 1290 190 69 7 chr10 115798848 115799150 -24517615 - L1MB4 LINE L1 -169 5952 5632 2051 122 3 0 chr10 115799151 115799447 -24517318 - AluSc SINE Alu -12 297 1 229 266 11 53 chr10 115799634 115799728 -24517037 - MLT1K LTR MaLR -492 96 7 2321 76 0 16 chr10 115800148 115800464 -24516301 + AluY SINE Alu 1 311 0 405 319 25 0 chr10 115800597 115800716 -24516049 - L2 LINE L2 0 3313 3192 1419 268 42 29 chr10 115800842 115801293 -24515472 - LTR16B LTR ERVL 0 464 8 237 239 183 0 chr10 115801507 115801578 -24515187 - L2 LINE L2 -48 3265 3182 489 269 110 32 chr10 115802152 115802371 -24514394 - MIR SINE MIR -25 237 2 329 342 50 0 chr10 115802655 115802775 -24513990 - MIR SINE MIR -64 198 73 726 251 161 0 chr10 115804032 115804243 -24512522 - MIR SINE MIR -3 259 15 348 302 77 18 chr10 115804254 115804423 -24512342 + MER5A DNA MER1_type 7 185 -4 347 304 29 0 chr10 115806303 115806405 -24510360 + MIR SINE MIR 49 153 -55 343 326 28 21 chr10 115806425 115806566 -24510199 - MIR3 SINE MIR -34 174 33 550 240 130 31 chr10 115806703 115806895 -24509870 + MER20 DNA MER1_type 2 212 -7 2269 65 0 4 chr10 115807069 115807346 -24509419 - AluY SINE Alu -15 296 21 210 193 0 0 chr10 115807802 115807859 -24508906 + (CA)n Simple_repeat Simple_repeat 1 57 0 351 325 63 24 chr10 115808089 115808295 -24508470 - MIR SINE MIR -25 237 24 459 252 87 12 chr10 115808873 115809051 -24507714 + MIR SINE MIR 4 193 -65 2096 137 10 0 chr10 115809149 115809456 -24507309 + AluSx SINE Alu 1 310 -2 567 0 0 0 chr10 115809463 115809526 -24507239 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 233 29 0 29 chr10 115809603 115809638 -24507127 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1185 82 0 16 chr10 115809751 115809934 -24506831 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 768 262 108 37 chr10 115810809 115811217 -24505548 - HAL1 LINE L1 0 2507 2071 417 282 129 5 chr10 115811447 115811656 -24505109 + MIR SINE MIR 28 262 0 2315 112 0 3 chr10 115811739 115812044 -24504721 + AluSq SINE Alu 1 304 -9 352 310 77 39 chr10 115812411 115812566 -24504199 - L1ME4a LINE L1 -11 6110 5950 2100 138 0 0 chr10 115812570 115812874 -24503891 + AluJb SINE Alu 1 304 -8 297 0 0 0 chr10 115812874 115812907 -24503858 + (TG)n Simple_repeat Simple_repeat 2 34 0 198 237 33 30 chr10 115813591 115813702 -24503063 - MIR SINE MIR -70 138 39 268 289 13 0 chr10 115813777 115813853 -24502912 - MIR SINE MIR -70 192 116 348 241 36 0 chr10 115814904 115814987 -24501778 + AluJo SINE Alu 117 202 -100 272 316 43 0 chr10 115815234 115815351 -24501414 + L2 LINE L2 2687 2808 -506 224 303 30 0 chr10 115815407 115815473 -24501292 + CT-rich Low_complexity Low_complexity 3 70 0 259 181 222 0 chr10 115815700 115815772 -24500993 + L2 LINE L2 3225 3312 -1 1227 45 0 0 chr10 115816146 115816300 -24500465 + (TGGA)n Simple_repeat Simple_repeat 1 154 0 282 225 50 12 chr10 115816311 115816391 -24500374 - MIR3 SINE MIR -23 185 103 180 0 0 0 chr10 115816478 115816498 -24500267 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 606 340 20 12 chr10 115816905 115817152 -24499613 - MIR SINE MIR -9 253 5 464 260 80 0 chr10 115817568 115817718 -24499047 + L1ME4a LINE L1 5959 6120 -1 371 102 5 0 chr10 115818081 115818136 -24498629 + L1PA11 LINE L1 6066 6122 -41 2471 81 0 0 chr10 115818138 115818434 -24498331 + AluSg SINE Alu 1 296 -14 425 231 0 11 chr10 115818434 115818525 -24498240 + AluJb SINE Alu 134 223 -89 1045 180 0 40 chr10 115818828 115818845 -24497920 + AluJb SINE Alu 121 137 -175 1495 171 91 4 chr10 115818845 115819120 -24497645 + AluSq SINE Alu 1 299 -14 1045 180 0 40 chr10 115819120 115819302 -24497463 + AluJb SINE Alu 137 312 0 1900 158 26 7 chr10 115820574 115820877 -24495888 - AluJo SINE Alu -3 309 1 370 307 97 0 chr10 115821472 115821648 -24495117 - MIR SINE MIR -31 231 39 233 311 0 97 chr10 115821640 115821743 -24495022 - MER5A DNA MER1_type -95 94 2 * 229 311 39 10 chr10 115822046 115822149 -24494616 - MIR SINE MIR -140 122 17 491 220 180 7 chr10 115822156 115822306 -24494459 + MER97b DNA MER1_type? 1 176 -877 423 265 22 29 chr10 115823221 115823357 -24493408 + MIR3 SINE MIR 4 138 -70 948 232 113 45 chr10 115823448 115823887 -24492878 + MLT1H LTR MaLR 1 526 -23 910 262 8 38 chr10 115823892 115824155 -24492610 - MIR SINE MIR -4 258 4 367 244 25 25 chr10 115824156 115824275 -24492490 - L2 LINE L2 -77 3236 3118 190 287 11 64 chr10 115824376 115824470 -24492295 - MER5A DNA MER1_type -2 187 99 2241 101 0 20 chr10 115824530 115824999 -24491766 - AluSg SINE Alu 0 310 1 206 291 23 35 chr10 115825064 115825150 -24491615 - MER5B DNA MER1_type -21 157 73 493 92 0 0 chr10 115825151 115825216 -24491549 - Alu SINE Alu -21 288 224 960 92 0 0 chr10 115825216 115825336 -24491429 - AluSq/x SINE Alu -192 120 1 288 184 0 0 chr10 115825347 115825396 -24491369 - MER5B DNA MER1_type -123 55 7 285 98 0 0 chr10 115827336 115827377 -24489388 + (T)n Simple_repeat Simple_repeat 1 41 0 851 228 117 57 chr10 115827377 115827728 -24489037 - MLT1K LTR MaLR -53 535 164 402 268 60 15 chr10 115828339 115828519 -24488246 + MIR SINE MIR 20 208 -54 320 261 11 23 chr10 115829444 115829532 -24487233 + MIR SINE MIR 49 135 -127 897 304 47 47 chr10 115830068 115830539 -24486226 - MLT1K LTR MaLR -3 585 115 498 276 53 6 chr10 115830798 115830968 -24485797 - LTR67 LTR ERVL -1 556 379 367 325 96 0 chr10 115831054 115831211 -24485554 + MIR SINE MIR 4 175 -87 314 298 131 30 chr10 115831577 115831745 -24485020 - MIR SINE MIR -13 249 65 485 200 22 23 chr10 115831792 115831950 -24484815 + MER3 DNA MER1_type 15 205 -4 822 228 107 78 chr10 115833441 115833541 -24483224 + MLT1L LTR MaLR 154 250 -365 2369 83 0 7 chr10 115833541 115833841 -24482924 + AluY SINE Alu 1 298 -13 822 228 107 78 chr10 115833841 115834122 -24482643 + MLT1L LTR MaLR 250 546 -69 1814 148 6 54 chr10 115834122 115834439 -24482326 + AluJb SINE Alu 1 302 -10 210 274 0 0 chr10 115834512 115834563 -24482202 - MIR SINE MIR -26 236 186 294 324 9 59 chr10 115834685 115834904 -24481861 - L2 LINE L2 -219 3053 2846 249 246 18 0 chr10 115834910 115834967 -24481798 - MER96 DNA MER1_type? -91 84 27 403 277 181 0 chr10 115834991 115835157 -24481608 + MIR SINE MIR 32 227 -35 22 0 0 0 chr10 115835176 115835198 -24481567 + AT_rich Low_complexity Low_complexity 1 22 0 622 152 7 43 chr10 115835829 115835967 -24480798 - FLAM_A SINE Alu 0 133 1 647 174 71 19 chr10 115836134 115836289 -24480476 + MER58B DNA MER1_type 1 163 -178 966 133 7 0 chr10 115836305 115836440 -24480325 - AluJo SINE Alu -176 136 1 1023 195 5 0 chr10 115836440 115836630 -24480135 + MER58B DNA MER1_type 151 341 0 305 316 11 46 chr10 115836630 115836857 -24479908 + MLT1J LTR MaLR 113 298 -213 417 279 0 37 chr10 115837323 115837459 -24479306 - MIR SINE MIR -81 181 51 746 278 10 15 chr10 115837953 115838158 -24478607 - MIR SINE MIR -12 250 47 209 0 97 0 chr10 115838159 115838190 -24478575 + T-rich Low_complexity Low_complexity 2 35 0 183 325 26 13 chr10 115838960 115839037 -24477728 + L2 LINE L2 3195 3272 0 248 329 0 0 chr10 115839483 115839562 -24477203 - MIR SINE MIR -118 144 66 812 162 20 97 chr10 115839573 115839820 -24476945 + MER33 DNA MER1_type 2 229 -95 1371 140 17 14 chr10 115839820 115840175 -24476590 + Tigger2a DNA MER2_type 1 444 0 308 113 9 217 chr10 115840175 115840239 -24476526 + MER33 DNA MER1_type 228 259 -2326 798 159 0 0 chr10 115840239 115840371 -24476394 - FLAM_A SINE Alu -1 132 1 308 113 9 217 chr10 115840371 115840421 -24476344 + MER33 DNA MER1_type 259 318 -6 287 271 28 47 chr10 115840421 115840471 -24476294 - L3 LINE CR1 -86 1491 1442 1575 150 126 109 chr10 115840471 115840930 -24475835 - MLT1C LTR MaLR 0 467 1 287 271 28 47 chr10 115840930 115840986 -24475779 - L3 LINE CR1 -135 1442 1387 253 300 44 11 chr10 115841547 115841637 -24475128 + MIR SINE MIR 60 152 -110 531 220 151 31 chr10 115841826 115841985 -24474780 + MER5A DNA MER1_type 11 188 -1 328 318 89 37 chr10 115841988 115842309 -24474456 + MLT1K LTR MaLR 2 422 -166 384 40 0 0 chr10 115842309 115842359 -24474406 + (TG)n Simple_repeat Simple_repeat 2 51 0 328 318 89 37 chr10 115842359 115842457 -24474308 + MLT1K LTR MaLR 422 513 -75 218 196 0 20 chr10 115843275 115843326 -24473439 + (TG)n Simple_repeat Simple_repeat 1 50 0 238 263 0 42 chr10 115844288 115844383 -24472382 + GA-rich Low_complexity Low_complexity 2 92 0 276 257 302 11 chr10 115845008 115845187 -24471578 - MIR SINE MIR 0 262 32 243 0 0 0 chr10 115845709 115845736 -24471029 + (A)n Simple_repeat Simple_repeat 1 27 0 606 250 38 0 chr10 115845741 115845901 -24470864 - L1MC4a LINE L1 -1917 5891 5726 425 240 75 7 chr10 115846022 115846168 -24470597 - L1MC4a LINE L1 -2305 5503 5348 870 177 6 12 chr10 115846199 115846363 -24470402 - FRAM SINE Alu -2 174 12 1641 194 27 10 chr10 115846510 115846804 -24469961 - AluJo SINE Alu -13 299 1 831 134 0 8 chr10 115847138 115847272 -24469493 - FLAM_C SINE Alu 0 133 1 453 276 65 20 chr10 115847539 115847738 -24469027 + L2 LINE L2 2890 3097 -216 246 81 0 0 chr10 115848937 115848974 -24467791 + (GA)n Simple_repeat Simple_repeat 2 38 0 334 200 20 50 chr10 115849353 115849453 -24467312 + CT-rich Low_complexity Low_complexity 5 101 0 988 204 11 0 chr10 115849453 115849795 -24466970 - AluJo SINE Alu 0 463 120 4173 139 29 91 chr10 115849827 115850435 -24466330 + L1MB4 LINE L1 5135 5779 -401 2293 120 0 19 chr10 115850435 115850752 -24466013 - AluSx SINE Alu -1 311 1 4173 139 29 91 chr10 115850752 115851211 -24465554 + L1MB4 LINE L1 5779 6135 -45 2288 94 3 0 chr10 115851211 115851497 -24465268 + AluSx SINE Alu 7 293 -19 4173 139 29 91 chr10 115851497 115851541 -24465224 + L1MB4 LINE L1 6135 6180 0 200 299 31 62 chr10 115851544 115851641 -24465124 - MIR3 SINE MIR -28 180 87 2413 108 0 6 chr10 115851667 115851981 -24464784 - AluSx SINE Alu 0 312 1 227 291 0 0 chr10 115852038 115852093 -24464672 + Tigger5 DNA MER2_type 1 55 -2268 * 327 225 0 14 chr10 115852065 115852136 -24464629 + Tigger5 DNA MER2_type 2254 2323 0 401 308 40 36 chr10 115852238 115852413 -24464352 - L1MC4a LINE L1 -1882 5926 5748 1644 171 56 34 chr10 115852413 115852720 -24464045 + MLT1A1 LTR MaLR 1 319 -46 2339 107 0 0 chr10 115852720 115853019 -24463746 + AluSc SINE Alu 1 299 -10 1644 171 56 34 chr10 115853019 115853068 -24463697 + MLT1A1 LTR MaLR 319 365 0 401 308 40 36 chr10 115853068 115853139 -24463626 - L1MC4a LINE L1 -2060 5748 5679 771 102 9 0 chr10 115853247 115853355 -24463410 - AluY SINE Alu -6 305 197 655 241 30 15 chr10 115853456 115853589 -24463176 + L1M4 LINE L1 3650 3789 -2357 2130 102 11 7 chr10 115853589 115853900 -24462865 + AluSx SINE Alu 1 295 -17 655 241 30 15 chr10 115853900 115853968 -24462797 + L1M4 LINE L1 3789 3855 -2291 * 659 195 162 0 chr10 115853940 115854150 -24462615 + L1M4 LINE L1 4305 4548 -1598 1131 172 145 80 chr10 115854514 115854776 -24461989 - AluJo SINE Alu -33 279 1 2286 109 12 21 chr10 115854873 115855213 -24461552 - MER1B DNA MER1_type 0 337 1 472 297 158 34 chr10 115855218 115855427 -24461338 + MIR SINE MIR 15 249 -13 2043 115 0 43 chr10 115856008 115856312 -24460453 + AluSx SINE Alu 1 291 -21 2674 25 6 16 chr10 115856320 115856634 -24460131 + AluY SINE Alu 1 311 0 715 157 0 0 chr10 115856696 115856804 -24459961 - AluJb SINE Alu -11 301 194 750 321 103 29 chr10 115857173 115857590 -24459175 - L2 LINE L2 0 3313 2866 452 252 10 0 chr10 115857745 115857848 -24458917 + MIR SINE MIR 58 161 -101 2484 88 0 0 chr10 115857852 115858159 -24458606 + AluSg SINE Alu 4 310 0 207 327 47 28 chr10 115859912 115860019 -24456746 - MIR SINE MIR -77 131 23 295 298 71 0 chr10 115860741 115860825 -24455940 - MIR3 SINE MIR -26 182 93 1800 181 0 16 chr10 115866177 115866481 -24450284 - AluJo SINE Alu -13 299 1 249 183 32 151 chr10 115866504 115866597 -24450168 - HsTC2 DNA Tc2 -1811 87 6 628 250 53 24 chr10 115867194 115867402 -24449363 - MIR SINE MIR 0 262 49 426 253 110 55 chr10 115867602 115867824 -24448941 + MIR SINE MIR 2 233 -29 258 344 76 45 chr10 115868869 115869026 -24447739 + MIR3 SINE MIR 32 193 -15 250 319 130 0 chr10 115872207 115872376 -24444389 + L1MC/D LINE L1 5580 5770 -2038 23 0 0 0 chr10 115874329 115874352 -24442413 + GC_rich Low_complexity Low_complexity 1 23 0 351 222 21 76 chr10 115875199 115875343 -24441422 + L1MC5 LINE L1 7797 7932 -29 373 233 126 0 chr10 115875680 115875783 -24440982 - L2 LINE L2 0 3272 3157 679 123 62 85 chr10 115876880 115876905 -24439860 - FLAM_C SINE Alu -173 129 105 2241 76 3 17 chr10 115876905 115877206 -24439559 + AluSp SINE Alu 1 297 -16 679 123 62 85 chr10 115877206 115877310 -24439455 - FLAM_C SINE Alu -197 105 3 2090 102 58 24 chr10 115877316 115877610 -24439155 - AluSg SINE Alu -6 304 1 196 311 104 70 chr10 115877803 115877893 -24438872 + L2 LINE L2 2478 2563 -751 831 227 41 6 chr10 115877893 115878065 -24438700 + MER45A DNA AcHobo 1 178 0 196 311 104 70 chr10 115878065 115878357 -24438408 + L2 LINE L2 2563 2873 -441 250 250 31 16 chr10 115879648 115879712 -24437053 + MIR SINE MIR 19 83 -125 204 125 0 0 chr10 115879718 115879750 -24437015 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 262 287 104 17 chr10 115879856 115879971 -24436794 + MIR SINE MIR 84 208 -54 662 200 22 0 chr10 115880084 115880219 -24436546 + MIR SINE MIR 120 257 -5 655 239 16 119 chr10 115880612 115880863 -24435902 + MIR SINE MIR 21 245 -17 22 0 0 0 chr10 115880872 115880894 -24435871 + AT_rich Low_complexity Low_complexity 1 22 0 333 161 0 16 chr10 115881065 115881127 -24435638 - MIR SINE MIR -72 190 130 186 341 214 6 chr10 115881140 115881313 -24435452 - L3 LINE CR1 -214 1363 1155 1058 175 27 16 chr10 115881413 115881596 -24435169 + AluJo SINE Alu 116 300 -12 26 0 0 0 chr10 115881596 115881622 -24435143 + AT_rich Low_complexity Low_complexity 1 26 0 1529 164 77 7 chr10 115881941 115882215 -24434550 - AluJb SINE Alu -13 299 7 1920 103 82 4 chr10 115882542 115882823 -24433942 + AluSp SINE Alu 1 303 -10 244 308 161 14 chr10 115883286 115883405 -24433360 + MIR SINE MIR 16 155 -107 385 196 256 0 chr10 115883405 115883548 -24433217 - MER5A DNA MER1_type 0 189 4 216 329 0 14 chr10 115883556 115883629 -24433136 + MIR SINE MIR 153 224 -38 643 260 6 62 chr10 115883747 115883924 -24432841 + MIR3 SINE MIR 21 187 -21 283 279 164 18 chr10 115884577 115884742 -24432023 - MIR SINE MIR -6 256 68 506 244 25 51 chr10 115885225 115885435 -24431330 + L1ME4a LINE L1 5572 5776 -376 324 321 95 7 chr10 115885531 115885668 -24431097 - MIR SINE MIR 0 262 114 320 268 92 63 chr10 115885754 115885896 -24430869 + L1ME4a LINE L1 5960 6105 -16 321 350 37 51 chr10 115885934 115886148 -24430617 - L1MC4a LINE L1 -1911 5897 5687 2513 81 7 0 chr10 115886181 115886490 -24430275 - AluSq SINE Alu -2 311 1 1131 83 0 0 chr10 115886490 115886623 -24430142 - AluSg SINE Alu -177 133 1 200 294 118 59 chr10 115887085 115887221 -24429544 + MIR3 SINE MIR 62 205 -3 458 282 58 19 chr10 115887240 115887396 -24429369 + MIR SINE MIR 62 223 -39 2272 100 3 0 chr10 115887779 115888078 -24428687 + AluSq SINE Alu 3 302 -11 1559 171 56 25 chr10 115888200 115888486 -24428279 + AluJo SINE Alu 1 295 -17 368 336 74 55 chr10 115888693 115888745 -24428020 + MIR SINE MIR 2 52 -210 1507 232 3 3 chr10 115888745 115888922 -24427843 - AluJo SINE Alu -2 310 134 207 69 0 0 chr10 115888922 115888951 -24427814 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1507 232 3 3 chr10 115888951 115888964 -24427801 - AluJo SINE Alu -178 134 122 2469 70 20 0 chr10 115888964 115889266 -24427499 + AluSp SINE Alu 1 308 -5 1507 232 3 3 chr10 115889266 115889384 -24427381 - AluJo SINE Alu -189 123 1 368 336 74 55 chr10 115889384 115889587 -24427178 + MIR SINE MIR 52 262 0 1744 176 20 13 chr10 115889805 115890172 -24426593 + AluJo SINE Alu 2 370 0 1217 196 98 136 chr10 115890344 115890774 -24425991 - L2 LINE L2 0 3313 2910 871 156 81 52 chr10 115890774 115890985 -24425780 + MER20 DNA MER1_type 1 217 -2 1217 196 98 136 chr10 115890985 115891146 -24425619 - L2 LINE L2 -403 2910 2744 2004 142 0 0 chr10 115891526 115891807 -24424958 - AluSx SINE Alu -21 291 11 241 238 38 0 chr10 115892204 115892284 -24424481 - L1MC4 LINE L1 -1346 6696 6614 201 147 0 0 chr10 115892316 115892350 -24424415 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1612 154 66 8 chr10 115892350 115892609 -24424156 - AluJb SINE Alu -38 274 1 219 229 49 16 chr10 115892621 115892682 -24424083 - MER5A DNA MER1_type -80 109 47 294 247 103 0 chr10 115892856 115892953 -24423812 - MER5A DNA MER1_type 0 189 83 321 278 0 11 chr10 115893100 115893190 -24423575 - MIR SINE MIR -1 261 173 812 174 0 8 chr10 115893190 115893322 -24423443 + FLAM_C SINE Alu 1 131 -12 2191 92 3 0 chr10 115893373 115893680 -24423085 - AluSg SINE Alu 0 308 1 240 284 17 15 chr10 115893710 115893794 -24422971 - MIR SINE MIR -121 87 2 1745 144 57 30 chr10 115894043 115894342 -24422423 - AluSx SINE Alu -4 308 2 1326 151 74 74 chr10 115894394 115894679 -24422086 - AluJo SINE Alu -23 289 5 193 274 235 10 chr10 115894764 115894866 -24421899 + L2 LINE L2 3129 3253 -19 1031 296 177 12 chr10 115894951 115895767 -24420998 - L2 LINE L2 0 3313 2355 1672 171 97 46 chr10 115895804 115896237 -24420528 + MLT1D LTR MaLR 51 505 0 205 256 77 77 chr10 115896248 115896404 -24420361 - L2 LINE L2 -994 2320 2165 374 315 80 19 chr10 115896647 115896809 -24419956 - MIR SINE MIR -11 251 80 1972 161 3 0 chr10 115896819 115897124 -24419641 + AluJb SINE Alu 7 312 0 360 289 21 42 chr10 115897308 115897450 -24419315 - MIR SINE MIR -72 190 52 485 225 47 16 chr10 115897795 115897924 -24418841 + L2 LINE L2 3181 3313 0 242 323 137 0 chr10 115897926 115898050 -24418715 - L2 LINE L2 -5 3267 3127 396 219 24 0 chr10 115898228 115898310 -24418455 + MIR SINE MIR 17 100 -162 223 302 78 54 chr10 115898326 115898455 -24418310 - MER5A DNA MER1_type -51 138 7 380 258 187 19 chr10 115899045 115899200 -24417565 - L2 LINE L2 -1 3312 3132 1797 154 21 4 chr10 115899227 115899507 -24417258 + AluJb SINE Alu 13 297 -15 1624 83 18 31 chr10 115899579 115899679 -24417086 - MER30 DNA MER1_type -4 226 126 2384 90 7 0 chr10 115899679 115899979 -24416786 + AluSq SINE Alu 2 303 -10 1624 83 18 31 chr10 115899979 115900107 -24416658 - MER30 DNA MER1_type -104 126 1 222 353 0 0 chr10 115900156 115900224 -24416541 - L3 LINE CR1 -82 1495 1428 444 297 29 34 chr10 115900314 115900489 -24416276 - MIR SINE MIR -71 191 18 2092 126 14 3 chr10 115901119 115901412 -24415353 + AluSx SINE Alu 1 296 -16 3454 162 29 3 chr10 115901422 115902051 -24414714 + L1P LINE L1 11 655 -5491 9993 62 10 9 chr10 115902055 115902988 -24413777 + L1PA6 LINE L1 4089 5019 -1135 2099 118 3 37 chr10 115902988 115903309 -24413456 + AluY SINE Alu 1 310 -1 9993 62 10 9 chr10 115903309 115904454 -24412311 + L1PA6 LINE L1 5019 6154 0 2430 75 0 0 chr10 115904458 115904751 -24412014 + AluY SINE Alu 1 293 -18 185 299 0 13 chr10 115904953 115905030 -24411735 + L2 LINE L2 3142 3217 -96 2503 58 3 0 chr10 115905069 115905364 -24411401 + AluY SINE Alu 1 296 -15 320 264 47 19 chr10 115905626 115905732 -24411033 - L1ME3A LINE L1 -219 5951 5843 22 0 0 0 chr10 115905737 115905759 -24411006 + AT_rich Low_complexity Low_complexity 1 22 0 2179 132 0 22 chr10 115905791 115906141 -24410624 - AluSx SINE Alu 0 312 1 1051 110 0 0 chr10 115906141 115906277 -24410488 - AluJb SINE Alu -176 136 1 678 238 111 55 chr10 115906278 115906622 -24410143 - L1ME3A LINE L1 -316 5854 5492 942 166 43 0 chr10 115906953 115907022 -24409743 + AluSg SINE Alu 60 125 -185 348 24 0 0 chr10 115907022 115907063 -24409702 + (TAA)n Simple_repeat Simple_repeat 2 42 0 942 166 43 0 chr10 115907063 115907156 -24409609 + AluSg SINE Alu 125 229 -81 396 0 0 0 chr10 115907379 115907423 -24409342 + (CA)n Simple_repeat Simple_repeat 1 44 0 1839 158 21 17 chr10 115908153 115908444 -24408321 + AluJo SINE Alu 1 292 -20 470 320 111 23 chr10 115908552 115908902 -24407863 + L1MC4a LINE L1 5549 5929 -1879 486 0 0 0 chr10 115908913 115908967 -24407798 + (TG)n Simple_repeat Simple_repeat 1 54 0 742 298 117 15 chr10 115909548 115910088 -24406677 + L2 LINE L2 2652 3244 -69 461 226 161 15 chr10 115910740 115910877 -24405888 - MIR SINE MIR -70 192 36 1783 191 67 29 chr10 115912615 115912895 -24403870 - MLT1C LTR MaLR 0 467 199 234 0 0 0 chr10 115912895 115912921 -24403844 + (TC)n Simple_repeat Simple_repeat 2 27 0 2304 102 0 0 chr10 115912921 115913214 -24403551 - AluY SINE Alu -17 294 2 1783 191 67 29 chr10 115913214 115913382 -24403383 - MLT1C LTR MaLR -267 200 1 295 242 248 13 chr10 115914624 115914777 -24401988 - MER5A DNA MER1_type 0 189 1 493 176 0 0 chr10 115915155 115915240 -24401525 - AluJ/FRAM SINE Alu -11 301 217 234 357 0 0 chr10 115915388 115915458 -24401307 + L2 LINE L2 3202 3271 -1 276 326 85 7 chr10 115916335 115916476 -24400289 - L2 LINE L2 -10 3262 3111 334 276 90 8 chr10 115916604 115916738 -24400027 - MIR SINE MIR -36 226 82 284 297 163 29 chr10 115917260 115917499 -24399266 - MLT1K LTR MaLR -173 415 145 653 304 29 51 chr10 115917730 115918043 -24398722 - MLT1I LTR MaLR 0 409 104 324 191 16 0 chr10 115918123 115918186 -24398579 + MIR SINE MIR 72 135 -127 1536 180 67 0 chr10 115918186 115918470 -24398295 - AluJo SINE Alu -9 303 1 2321 107 3 16 chr10 115918503 115918820 -24397945 - AluSq SINE Alu 0 313 1 3295 89 9 86 chr10 115918885 115919466 -24397299 - L1MA1 LINE L1 -4 6298 5763 4606 158 9 19 chr10 115919466 115920043 -24396722 - L1 LINE L1 -2067 5498 4932 854 86 78 8 chr10 115920043 115920171 -24396594 - MER85 DNA T2_type -2 137 1 4606 158 9 19 chr10 115920171 115920475 -24396290 - L1 LINE L1 -2633 4932 4626 703 81 0 0 chr10 115920642 115920729 -24396036 + AluSc SINE Alu 158 244 -65 216 0 0 0 chr10 115921321 115921345 -24395420 + (T)n Simple_repeat Simple_repeat 1 24 0 192 241 0 0 chr10 115921351 115921409 -24395356 + CT-rich Low_complexity Low_complexity 3 60 0 186 43 0 0 chr10 115921567 115921590 -24395175 + (T)n Simple_repeat Simple_repeat 1 23 0 3667 180 35 18 chr10 115921982 115922357 -24394408 - L1 LINE L1 -2916 4649 4282 1657 182 64 14 chr10 115922357 115922654 -24394111 - AluJb SINE Alu 0 312 1 3667 180 35 18 chr10 115922654 115923632 -24393133 - L1 LINE L1 -3283 4282 3327 339 274 9 9 chr10 115923900 115924013 -24392752 + MIR SINE MIR 149 261 -1 227 322 110 14 chr10 115924125 115924271 -24392494 + MIR SINE MIR 79 238 -24 865 130 0 36 chr10 115924624 115924762 -24392003 - FLAM_C SINE Alu 0 133 1 631 308 62 53 chr10 115924767 115925124 -24391641 - L2 LINE L2 -1 3312 2953 931 234 56 20 chr10 115925821 115926056 -24390709 + MIR SINE MIR 21 257 -5 198 323 113 51 chr10 115926084 115926474 -24390291 - L2 LINE L2 -537 2777 2364 276 100 0 0 chr10 115927745 115927785 -24388980 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 1865 173 6 19 chr10 115927787 115928100 -24388665 - AluJb SINE Alu -3 309 1 264 269 39 13 chr10 115928112 115928190 -24388575 + MIR SINE MIR 54 133 -75 248 330 66 28 chr10 115928871 115928977 -24387788 - MIR SINE MIR -61 147 38 407 200 22 22 chr10 115929099 115929189 -24387576 + L2 LINE L2 3219 3308 -5 2392 106 3 0 chr10 115929691 115930040 -24386725 + AluSx SINE Alu 1 350 0 468 248 40 67 chr10 115930086 115930288 -24386477 - MIR SINE MIR -9 253 13 2370 91 0 25 chr10 115930801 115931120 -24385645 - AluY SINE Alu 0 311 1 414 184 218 106 chr10 115931158 115931479 -24385286 + MLT1G1 LTR MaLR 188 584 -11 1682 154 35 51 chr10 115931479 115931790 -24384975 - AluJo SINE Alu -6 306 1 2544 66 3 0 chr10 115932056 115932357 -24384408 - AluY SINE Alu -9 302 1 779 228 92 0 chr10 115932576 115932760 -24384005 + MIR SINE MIR 31 231 -31 1945 154 0 23 chr10 115932973 115933278 -24383487 - AluJb SINE Alu -13 299 2 332 257 0 0 chr10 115933294 115933364 -24383401 + MIR SINE MIR 37 106 -102 21 0 0 0 chr10 115933538 115933559 -24383206 + AT_rich Low_complexity Low_complexity 1 21 0 2013 113 25 50 chr10 115933569 115933887 -24382878 + AluSx SINE Alu 1 310 -2 773 191 0 13 chr10 115933904 115934056 -24382709 - MER3 DNA MER1_type -59 150 1 240 271 16 90 chr10 115934669 115934791 -24381974 - MIR3 SINE MIR -86 122 10 1167 192 119 39 chr10 115935371 115935631 -24381134 + AluJo SINE Alu 1 281 -31 2047 130 0 23 chr10 115936017 115936316 -24380449 - AluSx SINE Alu -20 292 1 1445 142 0 43 chr10 115936522 115936755 -24380010 + AluJo SINE Alu 84 306 -6 22 94 0 0 chr10 115936755 115936819 -24379946 + AT_rich Low_complexity Low_complexity 1 64 0 348 137 0 0 chr10 115936825 115936876 -24379889 + MER66A LTR ERV1 287 337 -141 213 39 0 0 chr10 115936884 115936910 -24379855 + (TAA)n Simple_repeat Simple_repeat 3 28 0 470 311 0 0 chr10 115936934 115937053 -24379712 + L2 LINE L2 3195 3313 0 * 567 289 124 27 chr10 115937031 115937256 -24379509 - MIR SINE MIR -10 252 6 200 356 34 0 chr10 115937345 115937404 -24379361 + L2 LINE L2 3117 3177 -95 1003 220 68 4 chr10 115937552 115937788 -24378977 + MIR SINE MIR 11 261 -1 875 123 23 23 chr10 115938190 115938361 -24378404 - MER53 DNA DNA -4 185 15 2659 127 62 0 chr10 115938998 115939401 -24377364 - MSTA LTR MaLR 0 428 1 1462 153 9 90 chr10 115939469 115939711 -24377054 - MLT1B LTR MaLR 0 390 181 2070 108 49 0 chr10 115939711 115939998 -24376767 + AluSq SINE Alu 1 301 -12 1462 153 9 90 chr10 115939998 115940088 -24376677 - MLT1B LTR MaLR -209 181 85 348 51 254 0 chr10 115940090 115940149 -24376616 - MADE1 DNA Mariner -6 74 1 * 468 182 11 4 chr10 115940149 115940235 -24376530 - MLT1B LTR MaLR -325 65 1 405 291 94 87 chr10 115940318 115940986 -24375779 + L2 LINE L2 2558 3247 -25 409 355 41 6 chr10 115941089 115941261 -24375504 - MER5B DNA MER1_type 0 178 1 200 319 42 14 chr10 115941559 115941631 -24375134 - L2 LINE L2 0 3272 3199 606 252 33 13 chr10 115941825 115941976 -24374789 + MER5A DNA MER1_type 14 167 -22 2051 164 0 0 chr10 115942030 115942334 -24374431 + AluSx SINE Alu 1 304 -8 263 293 207 0 chr10 115942492 115942608 -24374157 - MIR SINE MIR -67 195 56 202 254 60 83 chr10 115942749 115943001 -24373764 - L2 LINE L2 -211 3061 2816 245 237 52 82 chr10 115943151 115943248 -24373517 + MIR SINE MIR 95 188 -74 274 268 134 76 chr10 115943797 115943906 -24372859 - MIR SINE MIR -51 211 89 2056 153 0 3 chr10 115943906 115944214 -24372551 + AluJb SINE Alu 6 312 0 274 268 134 76 chr10 115944214 115944261 -24372504 - MIR SINE MIR -173 89 46 2269 131 0 3 chr10 115944422 115944737 -24372028 + AluSx SINE Alu 1 562 0 349 45 61 30 chr10 115944737 115944985 -24371780 + GA-rich Low_complexity Low_complexity 4 180 0 2282 58 22 0 chr10 115945172 115945483 -24371282 - AluY SINE Alu 0 317 1 432 314 57 0 chr10 115945677 115945836 -24370929 + MIR SINE MIR 81 248 -14 695 216 116 25 chr10 115946689 115946888 -24369877 + MIR SINE MIR 6 222 -40 268 235 133 7 chr10 115947639 115947780 -24368985 - MIR SINE MIR -71 191 30 288 218 26 26 chr10 115948366 115948444 -24368321 - MIR SINE MIR -129 133 56 217 62 42 62 chr10 115948891 115948939 -24367826 + (GGAAA)n Simple_repeat Simple_repeat 3 49 0 566 224 20 20 chr10 115949086 115949233 -24367532 - MER69 DNA AcHobo 0 2526 2380 381 252 211 0 chr10 115949629 115949752 -24367013 - MIR3 SINE MIR -44 164 16 757 281 81 5 chr10 115952246 115952467 -24364298 + MIR SINE MIR 25 262 0 729 246 86 11 chr10 115952599 115952786 -24363979 - MER58A DNA MER1_type 0 224 24 330 237 78 82 chr10 115952886 115953090 -24363675 + MIR3 SINE MIR 5 201 -61 206 164 273 0 chr10 115953140 115953195 -24363570 + L2 LINE L2 3198 3267 -5 1268 243 139 23 chr10 115953442 115953875 -24362890 - MLT1D LTR MaLR -22 483 1 339 256 56 56 chr10 115953875 115953945 -24362820 - L1ME4a LINE L1 -228 5893 5824 1768 194 0 3 chr10 115953945 115954244 -24362521 - AluJo SINE Alu -14 298 1 339 256 56 56 chr10 115954244 115954353 -24362412 - L1ME4a LINE L1 -296 5825 5714 701 286 50 23 chr10 115954365 115954585 -24362180 + MIR SINE MIR 24 249 -13 549 232 0 0 chr10 115954617 115954729 -24362036 - L1ME4a LINE L1 -450 5671 5560 495 243 0 27 chr10 115954915 115955026 -24361739 - L2 LINE L2 0 3313 3206 2153 133 21 29 chr10 115955600 115955977 -24360788 + THE1C LTR MaLR 1 374 -1 2329 161 62 5 chr10 115956228 115956633 -24360132 + MSTA LTR MaLR 1 428 0 191 303 26 0 chr10 115957127 115957203 -24359562 - MIR3 SINE MIR -19 189 112 2350 167 16 0 chr10 115957888 115958272 -24358493 - MER57A LTR ERV1 -13 390 1 872 141 0 15 chr10 115958350 115958485 -24358280 - FLAM_C SINE Alu 0 133 1 200 205 0 0 chr10 115958489 115958528 -24358237 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 210 324 85 11 chr10 115958754 115958930 -24357835 - L2 LINE L2 -193 3079 2891 480 35 0 0 chr10 115959195 115959253 -24357512 + (CA)n Simple_repeat Simple_repeat 2 59 0 316 155 12 83 chr10 115959446 115959530 -24357235 + MER101B LTR ERV1 460 537 -33 204 143 0 0 chr10 115959547 115959589 -24357176 + (GA)n Simple_repeat Simple_repeat 2 43 0 2063 152 96 0 chr10 115960567 115960941 -24355824 + MSTB LTR MaLR 2 411 -15 637 293 35 22 chr10 115961194 115961423 -24355342 + MLT1K LTR MaLR 316 547 -41 297 251 127 56 chr10 115961774 115961993 -24354772 + L1MC4a LINE L1 5689 5751 -370 557 300 43 53 chr10 115963266 115963773 -24352992 - L1ME LINE L1 -346 5818 5317 318 225 81 0 chr10 115963797 115963908 -24352857 - L1ME LINE L1 -879 5267 5148 212 172 81 35 chr10 115963926 115964013 -24352752 - MER5C DNA MER1_type -22 302 212 198 144 33 33 chr10 115965095 115965185 -24351580 + (TG)n Simple_repeat Simple_repeat 2 91 0 2062 102 18 14 chr10 115965352 115965488 -24351277 + AluSx SINE Alu 1 135 -177 2437 75 3 0 chr10 115965488 115965782 -24350983 + AluSp SINE Alu 1 295 -18 2062 102 18 14 chr10 115965782 115965928 -24350837 + AluSx SINE Alu 135 284 -28 279 79 0 0 chr10 115965928 115965966 -24350799 + (CA)n Simple_repeat Simple_repeat 2 39 0 260 287 49 33 chr10 115966598 115966720 -24350045 + L2 LINE L2 2837 2960 -354 * 437 272 114 75 chr10 115966713 115967006 -24349759 - L2 LINE L2 -1337 1977 1662 1749 136 222 0 chr10 115967006 115967330 -24349435 - MSTD LTR MaLR 0 396 1 437 272 114 75 chr10 115967330 115967448 -24349317 - L2 LINE L2 -1652 1662 1550 492 305 7 0 chr10 115967482 115967636 -24349129 - MIR SINE MIR -73 189 35 331 341 67 0 chr10 115968031 115968195 -24348570 + MER5B DNA MER1_type 2 176 -2 456 207 14 159 chr10 115969492 115969700 -24347065 - MIR SINE MIR 0 262 85 2306 112 0 0 chr10 115970082 115970386 -24346379 - AluSg SINE Alu -6 304 1 2324 104 0 19 chr10 115970544 115970861 -24345904 - AluSq SINE Alu -2 311 1 625 253 0 7 chr10 115971130 115971276 -24345489 - MIR3 SINE MIR -28 180 36 709 202 105 66 chr10 115971295 115971523 -24345242 - L1ME3A LINE L1 -5 6165 5929 1505 136 55 0 chr10 115971621 115971878 -24344887 + L1MA5A LINE L1 6023 6293 -4 2099 84 69 4 chr10 115971887 115972162 -24344603 + AluSx SINE Alu 1 293 -19 1654 200 0 7 chr10 115972171 115972471 -24344294 + AluJo SINE Alu 1 298 -14 309 221 0 0 chr10 115972486 115972554 -24344211 + MLT1B LTR MaLR 96 163 -227 8043 111 119 78 chr10 115972556 115974182 -24342583 - pTR5 LTR ERV1 0 2438 745 1123 133 11 32 chr10 115974184 115974372 -24342393 + MLT1B LTR MaLR 159 342 -48 1131 265 103 49 chr10 115974388 115974466 -24342299 + L2 LINE L2 2268 2340 -973 2702 62 12 3 chr10 115974466 115974807 -24341958 - LTR14A LTR ERVK 0 344 1 1131 265 103 49 chr10 115974807 115975140 -24341625 + L2 LINE L2 2340 2653 -660 2423 81 0 7 chr10 115975140 115975437 -24341328 - AluSq SINE Alu -18 295 1 1131 265 103 49 chr10 115975437 115976004 -24340761 + L2 LINE L2 2653 3313 0 2367 99 0 10 chr10 115976015 115976318 -24340447 - AluSx SINE Alu -12 300 1 1306 271 86 45 chr10 115976398 115976819 -24339946 - MLT1K LTR MaLR -22 566 129 260 254 79 0 chr10 115976962 115977025 -24339740 + L2 LINE L2 3188 3255 -58 2426 54 10 17 chr10 115977056 115977351 -24339414 - AluY SINE Alu -18 293 1 299 250 88 0 chr10 115978773 115978853 -24337912 + L2 LINE L2 3188 3274 -39 208 267 33 17 chr10 115978870 115978930 -24337835 - L2 LINE L2 0 3313 3253 303 258 252 6 chr10 115979214 115979373 -24337392 - MLT1L LTR MaLR -335 280 83 1854 145 25 18 chr10 115979665 115979948 -24336817 - AluJo SINE Alu -27 285 1 1670 107 9 0 chr10 115980943 115981168 -24335597 + AluSp SINE Alu 73 299 -14 191 214 229 0 chr10 115982460 115982530 -24334235 - L2 LINE L2 0 3272 3187 315 338 129 24 chr10 115982624 115983278 -24333487 - L2 LINE L2 -189 3083 2323 2609 277 36 50 chr10 115983290 115983418 -24333347 - L1ME LINE L1 -4833 1145 1017 1903 188 0 0 chr10 115983418 115983721 -24333044 - AluSx SINE Alu -9 303 1 2005 142 7 13 chr10 115983724 115984034 -24332731 - AluJo SINE Alu 0 312 5 2609 277 36 50 chr10 115984034 115985185 -24331580 - L1ME LINE L1 -4963 1015 3 289 254 59 17 chr10 115985302 115985420 -24331345 + L2 LINE L2 2231 2353 -961 1098 257 45 21 chr10 115985429 115985807 -24330958 + L2 LINE L2 2922 3308 -5 2463 60 0 32 chr10 115985991 115986307 -24330458 - AluY SINE Alu -5 306 1 394 320 188 0 chr10 115986678 115986806 -24329959 + MER91A DNA MER1_type 1 152 -44 3757 174 31 57 chr10 115986868 115987673 -24329092 - LTR1 LTR ERV1 0 785 2 536 280 124 53 chr10 115987959 115988601 -24328164 - L1ME2 LINE L1 -212 5950 5287 23 0 0 0 chr10 115988613 115988636 -24328129 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr10 115989260 115989299 -24327466 + AT_rich Low_complexity Low_complexity 1 39 0 56 39 0 0 chr10 115989340 115989417 -24327348 + AT_rich Low_complexity Low_complexity 1 77 0 23 68 0 0 chr10 115989795 115989839 -24326926 + AT_rich Low_complexity Low_complexity 1 44 0 254 205 77 77 chr10 115990024 115990141 -24326624 - MIR3 SINE MIR -78 130 14 1841 176 0 7 chr10 115990159 115990461 -24326304 + AluJb SINE Alu 1 300 -12 2300 98 0 0 chr10 115990470 115990755 -24326010 + AluSx SINE Alu 3 287 -25 9471 144 23 3 chr10 115991004 115993130 -24323635 - L1PA14 LINE L1 -311 5850 3684 1768 92 66 52 chr10 115994236 115994507 -24322258 + AluSx SINE Alu 5 279 -33 196 51 26 26 chr10 115994511 115994550 -24322215 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 838 249 158 66 chr10 115995505 115995915 -24320850 + LTR16A LTR ERVL 1 448 -2 1690 250 78 96 chr10 115997278 115998386 -24318379 - L1MC4 LINE L1 -226 7816 6729 2321 81 7 13 chr10 115998750 115999048 -24317717 + AluSg SINE Alu 1 296 -14 2186 108 0 3 chr10 115999059 115999384 -24317381 + AluSx SINE Alu 1 324 0 2008 125 3 26 chr10 115999966 116000269 -24316496 + AluJb SINE Alu 11 306 -6 644 161 71 71 chr10 116000352 116000371 -24316394 - FAM SINE Alu -138 47 29 2151 116 0 7 chr10 116000371 116000663 -24316102 + AluSx SINE Alu 1 290 -22 644 161 71 71 chr10 116000663 116000798 -24315967 - FAM SINE Alu -155 30 1 255 204 74 0 chr10 116001111 116001165 -24315600 + MIR SINE MIR 175 232 -30 1781 80 8 36 chr10 116001728 116001892 -24314873 - AluSp SINE Alu -15 298 142 189 0 0 0 chr10 116001892 116001913 -24314852 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1781 80 8 36 chr10 116001913 116001998 -24314767 - AluSp SINE Alu -171 142 56 24 67 0 0 chr10 116002101 116002146 -24314619 + AT_rich Low_complexity Low_complexity 1 45 0 704 127 0 0 chr10 116002506 116002616 -24314149 + FLAM_C SINE Alu 2 111 -32 557 165 182 8 chr10 116002659 116002780 -24313985 - MER5A DNA MER1_type 0 189 48 183 80 0 0 chr10 116003069 116003094 -24313671 + (CTG)n Simple_repeat Simple_repeat 3 27 0 749 196 35 0 chr10 116006192 116006335 -24310430 + MER3 DNA MER1_type 1 148 -61 335 227 277 14 chr10 116008901 116009042 -24307723 + MIR SINE MIR 43 220 -42 2163 127 7 0 chr10 116009623 116009922 -24306843 + AluSx SINE Alu 2 302 -10 240 364 30 0 chr10 116010780 116010846 -24305919 - L2 LINE L2 -259 3054 2987 441 257 177 6 chr10 116010873 116011048 -24305717 + MIR SINE MIR 48 252 -10 215 250 73 0 chr10 116011111 116011179 -24305586 - L2 LINE L2 -454 2860 2788 240 321 145 8 chr10 116011241 116011372 -24305393 - L2 LINE L2 -669 2645 2497 2012 142 0 20 chr10 116011969 116012272 -24304493 + AluSx SINE Alu 1 297 -15 23 68 0 0 chr10 116013538 116013582 -24303183 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr10 116015124 116015147 -24301618 + AT_rich Low_complexity Low_complexity 1 23 0 300 256 124 47 chr10 116016155 116016284 -24300481 + MIR SINE MIR 8 146 -116 21 57 0 0 chr10 116017017 116017052 -24299713 + AT_rich Low_complexity Low_complexity 1 35 0 1912 134 4 4 chr10 116018927 116019203 -24297562 + AluSx SINE Alu 1 276 -36 249 239 172 52 chr10 116019438 116019572 -24297193 - MIR SINE MIR -56 206 57 2019 106 7 27 chr10 116019834 116020127 -24296638 - AluSx SINE Alu -25 287 1 22 0 0 0 chr10 116022370 116022392 -24294373 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr10 116022801 116022826 -24293939 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1736 154 3 48 chr10 116023819 116024131 -24292634 + AluJb SINE Alu 2 299 -13 1916 103 60 14 chr10 116024364 116024646 -24292119 + AluSg SINE Alu 1 295 -15 702 121 57 32 chr10 116024940 116025064 -24291701 + AluJo SINE Alu 8 134 -178 21 0 0 0 chr10 116025067 116025088 -24291677 + AT_rich Low_complexity Low_complexity 1 21 0 906 219 46 114 chr10 116025590 116026236 -24290529 + L1MC5 LINE L1 6873 7445 -516 810 213 100 60 chr10 116026402 116026801 -24289964 + L1MC5 LINE L1 7499 7913 -48 738 182 6 66 chr10 116027126 116027208 -24289557 + L1MC4a LINE L1 7289 7356 -452 2427 77 0 0 chr10 116027208 116027506 -24289259 - AluY SINE Alu -7 304 7 738 182 6 66 chr10 116027506 116027604 -24289161 + L1MC4a LINE L1 7356 7458 -350 33 0 0 0 chr10 116027604 116027637 -24289128 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 116028151 116028183 -24288582 + AT_rich Low_complexity Low_complexity 1 32 0 243 0 0 0 chr10 116029182 116029209 -24287556 + (CA)n Simple_repeat Simple_repeat 1 27 0 338 213 0 0 chr10 116029262 116029337 -24287428 + MER116 DNA Mariner 1 75 -5 2024 143 16 0 chr10 116030769 116031076 -24285689 + AluSx SINE Alu 1 312 0 2315 93 7 0 chr10 116032736 116033038 -24283727 + AluSx SINE Alu 1 304 -8 2309 98 0 0 chr10 116034564 116034869 -24281896 + AluY SINE Alu 1 305 -6 32 0 0 0 chr10 116035199 116035231 -24281534 + AT_rich Low_complexity Low_complexity 1 32 0 1413 124 49 4 chr10 116035561 116035787 -24280978 - MER46A DNA MER2_type 0 236 1 265 352 48 16 chr10 116036289 116036414 -24280351 + L2 LINE L2 2933 3061 -252 2093 114 7 13 chr10 116036805 116037103 -24279662 - AluSx SINE Alu -16 296 1 22 0 0 0 chr10 116037458 116037480 -24279285 + AT_rich Low_complexity Low_complexity 1 22 0 2372 94 0 7 chr10 116041503 116041811 -24274954 + AluSg SINE Alu 1 306 -4 2195 81 35 0 chr10 116043259 116043542 -24273223 + AluSg SINE Alu 4 296 -14 216 241 165 25 chr10 116044822 116044901 -24271864 - L2 LINE L2 -33 3280 3191 273 282 206 15 chr10 116045090 116045221 -24271544 + MIR3 SINE MIR 30 185 -23 1790 155 31 3 chr10 116045523 116045813 -24270952 + MER2 DNA MER2_type 48 345 0 461 254 102 17 chr10 116045828 116046074 -24270691 - L1ME4a LINE L1 -183 5938 5666 206 283 100 0 chr10 116046332 116046392 -24270373 - MIR3 SINE MIR -27 181 116 378 0 0 0 chr10 116047452 116047494 -24269271 + (CA)n Simple_repeat Simple_repeat 2 43 0 370 375 33 7 chr10 116047603 116047755 -24269010 - MIR3 SINE MIR -29 179 24 194 0 39 0 chr10 116050026 116050052 -24266713 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2126 116 7 10 chr10 116050307 116050610 -24266155 + AluSq SINE Alu 8 309 -4 515 168 63 0 chr10 116051183 116051278 -24265487 - L1M4 LINE L1 -710 5468 5368 2323 113 3 0 chr10 116051278 116051589 -24265176 - AluSx SINE Alu 0 312 1 3341 202 29 17 chr10 116051592 116052361 -24264404 - L1M4 LINE L1 -992 5154 4377 8860 121 60 16 chr10 116052362 116053817 -24262948 - Tigger1 DNA MER2_type -877 1541 24 1073 242 20 4 chr10 116053822 116054074 -24262691 - L1M4 LINE L1 -1912 4234 3979 275 211 0 0 chr10 116054518 116054575 -24262190 - L1ME4a LINE L1 -1054 5092 5036 623 293 271 7 chr10 116055173 116055646 -24261119 - L2 LINE L2 0 3313 2690 319 266 166 0 chr10 116056267 116056406 -24260359 + MER112 DNA MER1_type 92 253 -7 237 65 0 0 chr10 116056869 116056900 -24259865 + (T)n Simple_repeat Simple_repeat 1 31 0 2065 147 7 3 chr10 116057062 116057362 -24259403 - AluSx SINE Alu -11 301 1 359 259 166 0 chr10 116058166 116058305 -24258460 + MER112 DNA MER1_type 92 253 -7 1143 159 11 0 chr10 116058316 116058492 -24258273 - AluSg/x SINE Alu -12 300 123 6342 36 5 0 chr10 116059557 116060304 -24256461 - L1PA4 LINE L1 -1 6154 5404 3927 30 0 0 chr10 116060304 116060774 -24255991 + L1PA4 LINE L1 4934 5403 -743 201 167 0 0 chr10 116061236 116061272 -24255493 - L2 LINE L2 -52 3261 3226 1797 132 24 34 chr10 116061576 116061871 -24254894 - AluJo SINE Alu -20 292 1 410 329 35 31 chr10 116062074 116062302 -24254463 + L2 LINE L2 2589 2817 -497 237 108 0 0 chr10 116062641 116062678 -24254087 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 28 29 0 0 chr10 116063626 116063661 -24253104 + AT_rich Low_complexity Low_complexity 1 35 0 213 268 106 65 chr10 116063852 116063975 -24252790 - MIR SINE MIR -122 140 13 641 254 127 0 chr10 116063985 116064150 -24252615 + MIR SINE MIR 2 187 -75 494 276 101 25 chr10 116065916 116066115 -24250650 + MIR SINE MIR 49 262 0 1867 201 100 61 chr10 116067583 116068141 -24248624 + L1ME3A LINE L1 5591 6170 0 2859 208 65 50 chr10 116068277 116068610 -24248155 + L1M4 LINE L1 2750 3077 -3069 907 203 120 0 chr10 116068610 116068802 -24247963 + MER20 DNA MER1_type 1 215 -4 2859 208 65 50 chr10 116068802 116069483 -24247282 + L1M4 LINE L1 3077 3779 -2367 1071 248 42 92 chr10 116069485 116069969 -24246796 + MER21B LTR ERV1 34 532 -73 815 199 7 7 chr10 116069969 116070120 -24246645 + FRAM SINE Alu 1 150 -26 588 246 41 73 chr10 116070128 116070348 -24246417 + MER21A LTR ERV1 571 783 -148 4311 191 90 59 chr10 116070360 116071150 -24245615 + L1M4 LINE L1 3784 4627 -1519 1873 158 0 17 chr10 116071150 116071448 -24245317 + AluJb SINE Alu 1 293 -19 4311 191 90 59 chr10 116071448 116071896 -24244869 + L1M4 LINE L1 4627 5060 -1086 2054 129 7 0 chr10 116071896 116072182 -24244583 - AluSg SINE Alu -22 288 1 2303 91 0 3 chr10 116072190 116072505 -24244260 - AluY SINE Alu 0 314 1 619 258 10 26 chr10 116072760 116072954 -24243811 + HAL1 LINE L1 2311 2501 -6 21 0 0 0 chr10 116073384 116073405 -24243360 + AT_rich Low_complexity Low_complexity 1 21 0 341 348 90 31 chr10 116075242 116075630 -24241135 - L2 LINE L2 -20 3293 2883 2242 84 28 0 chr10 116075651 116075935 -24240830 + AluY SINE Alu 1 292 -19 341 322 0 8 chr10 116075943 116076064 -24240701 - L2 LINE L2 -670 2644 2525 23 0 0 0 chr10 116076302 116076325 -24240440 + AT_rich Low_complexity Low_complexity 1 23 0 2043 134 0 0 chr10 116076549 116076826 -24239939 - AluSx SINE Alu -35 277 1 210 277 72 0 chr10 116077842 116077925 -24238840 - MIR3 SINE MIR -1 207 119 815 191 0 0 chr10 116078842 116078973 -24237792 - FLAM_C SINE Alu -2 131 1 238 303 0 38 chr10 116080485 116080670 -24236095 + C-rich Low_complexity Low_complexity 2 179 0 240 276 0 0 chr10 116080797 116080924 -24235841 + A-rich Low_complexity Low_complexity 1 127 0 227 208 21 0 chr10 116081320 116081368 -24235397 + MIR SINE MIR 114 162 -100 270 257 147 9 chr10 116081564 116081673 -24235092 + MIR SINE MIR 31 154 -108 221 244 61 37 chr10 116081683 116081765 -24235000 - L2 LINE L2 -25 3247 3164 2555 55 0 22 chr10 116081933 116082245 -24234520 + AluSx SINE Alu 1 305 -7 1214 140 0 65 chr10 116082315 116082544 -24234221 - MER20 DNA MER1_type 0 219 6 183 129 0 0 chr10 116082858 116082889 -24233876 + (T)n Simple_repeat Simple_repeat 1 31 0 1708 105 42 0 chr10 116083271 116083545 -24233220 - AluSg SINE Alu 0 318 35 375 200 19 57 chr10 116085552 116085657 -24231108 - MIR SINE MIR -116 146 46 308 340 97 12 chr10 116085910 116086157 -24230608 - L1M4 LINE L1 -2221 3925 3658 317 205 255 0 chr10 116086623 116086759 -24230006 - MIR SINE MIR -63 145 26 473 276 58 29 chr10 116086812 116086986 -24229779 + MER20B DNA MER1_type 1 179 -604 483 254 8 16 chr10 116087041 116087163 -24229602 - L2 LINE L2 -2 3311 3191 258 245 20 59 chr10 116087451 116087553 -24229212 - L2 LINE L2 -515 2799 2702 2423 92 0 0 chr10 116087556 116087861 -24228904 - AluSx SINE Alu -5 307 3 2604 51 0 0 chr10 116088417 116088712 -24228053 - AluY SINE Alu -16 295 1 470 261 106 11 chr10 116088804 116088984 -24227781 + MIR SINE MIR 50 246 -16 2084 126 7 3 chr10 116089913 116090215 -24226550 + AluJo SINE Alu 1 303 -9 228 220 211 64 chr10 116090441 116090550 -24226215 + L2 LINE L2 3189 3313 0 300 281 70 8 chr10 116091381 116091509 -24225256 + MIR3 SINE MIR 61 196 -12 2367 110 0 0 chr10 116091541 116091849 -24224916 + AluSg SINE Alu 1 308 -2 375 236 34 0 chr10 116092638 116092727 -24224038 + MIR SINE MIR 54 145 -63 897 253 41 4 chr10 116092734 116092979 -24223786 + MIR SINE MIR 9 262 0 190 209 0 0 chr10 116093519 116093562 -24223203 + L2 LINE L2 3271 3313 0 534 306 43 21 chr10 116094073 116094308 -24222457 - MIR SINE MIR -13 249 10 24 77 0 0 chr10 116096697 116096749 -24220016 + GC_rich Low_complexity Low_complexity 1 52 0 1142 148 12 0 chr10 116097062 116097231 -24219534 + FAM SINE Alu 1 171 -4 730 176 163 19 chr10 116097255 116097643 -24219122 + LTR54B LTR ERV1 1 490 -8 818 170 113 0 chr10 116098226 116098380 -24218385 - MER21B LTR ERV1 -11 852 681 1094 145 12 0 chr10 116098380 116098546 -24218219 - LTR39 LTR ERV1 0 783 616 2210 107 7 0 chr10 116098546 116098846 -24217919 - AluSx SINE Alu -9 303 2 646 180 172 8 chr10 116098846 116098968 -24217797 - AluJo SINE Alu -167 145 4 258 304 10 20 chr10 116098999 116099101 -24217664 + MER5B DNA MER1_type 78 178 0 1399 165 131 15 chr10 116099617 116099868 -24216897 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 116099868 116099907 -24216858 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1399 165 131 15 chr10 116099907 116099922 -24216843 + AluJo SINE Alu 286 298 -4 236 296 80 35 chr10 116100074 116100273 -24216492 - L2 LINE L2 -1409 1905 1698 246 105 0 0 chr10 116100422 116100460 -24216305 + (GA)n Simple_repeat Simple_repeat 2 39 0 213 323 189 0 chr10 116100802 116100929 -24215836 - MIR SINE MIR 0 262 112 558 234 136 7 chr10 116101277 116101431 -24215334 - MIR SINE MIR -65 197 24 213 121 0 0 chr10 116102416 116102449 -24214316 + (CA)n Simple_repeat Simple_repeat 1 33 0 180 111 0 0 chr10 116103317 116103344 -24213421 + (A)n Simple_repeat Simple_repeat 1 27 0 218 246 0 0 chr10 116103830 116103891 -24212874 + G-rich Low_complexity Low_complexity 4 64 0 201 232 0 0 chr10 116104095 116104151 -24212614 + (TG)n Simple_repeat Simple_repeat 1 56 0 215 276 0 0 chr10 116104427 116104485 -24212280 + MIR SINE MIR 204 261 -1 205 250 0 0 chr10 116104570 116104622 -24212143 + (CA)n Simple_repeat Simple_repeat 2 53 0 464 198 0 10 chr10 116105036 116105137 -24211628 + MIR SINE MIR 50 149 -113 2369 77 3 0 chr10 116105475 116105775 -24210990 + AluSx SINE Alu 1 301 -11 265 286 48 67 chr10 116108062 116108167 -24208598 + L2 LINE L2 3146 3248 -24 225 333 9 18 chr10 116108836 116108947 -24207818 + MIR SINE MIR 74 183 -79 2295 95 0 7 chr10 116108978 116109273 -24207492 + AluSg SINE Alu 1 293 -17 296 327 65 9 chr10 116109366 116109473 -24207292 + MIR SINE MIR 36 148 -60 402 268 27 9 chr10 116110086 116110198 -24206567 - L2 LINE L2 -1 3312 3199 1611 132 105 4 chr10 116110471 116110748 -24206017 + AluSq SINE Alu 1 303 0 434 320 77 21 chr10 116111283 116111313 -24205452 - MIR SINE MIR -2 260 233 16153 118 27 24 chr10 116111313 116113512 -24203253 + Tigger1 DNA MER2_type 1 2209 -209 1903 154 20 0 chr10 116113512 116113873 -24202892 - AluSx SINE Alu 0 312 1 16153 118 27 24 chr10 116113873 116114081 -24202684 + Tigger1 DNA MER2_type 2209 2415 -3 434 320 77 21 chr10 116114081 116114244 -24202521 - MIR SINE MIR -29 233 56 507 268 92 30 chr10 116114831 116114873 -24201892 + MER5B DNA MER1_type 5 43 -135 929 157 32 16 chr10 116114873 116115058 -24201707 + MER53 DNA DNA 1 188 -1 507 268 92 30 chr10 116115058 116115179 -24201586 + MER5B DNA MER1_type 43 178 0 957 269 8 34 chr10 116115594 116115858 -24200907 + MIR SINE MIR 6 262 0 1662 155 47 22 chr10 116116105 116116257 -24200508 - AluJo SINE Alu -28 284 137 378 0 0 0 chr10 116116257 116116299 -24200466 + (CA)n Simple_repeat Simple_repeat 2 43 0 216 0 0 0 chr10 116116300 116116324 -24200441 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1662 155 47 22 chr10 116116324 116116446 -24200319 - AluJo SINE Alu -174 138 1 368 276 59 9 chr10 116116494 116116620 -24200145 + MIR3 SINE MIR 35 167 -41 2546 55 0 7 chr10 116116841 116117148 -24199617 - AluY SINE Alu -6 305 1 6308 201 75 56 chr10 116118459 116119342 -24197423 + L1MD1 LINE L1 2 867 -5673 1606 118 12 99 chr10 116119342 116119389 -24197376 + L1MA8 LINE L1 5995 6045 -246 2045 135 0 0 chr10 116119389 116119678 -24197087 + AluSx SINE Alu 3 291 -21 1606 118 12 99 chr10 116119678 116119952 -24196813 + L1MA8 LINE L1 6045 6288 -3 6308 201 75 56 chr10 116119952 116121391 -24195374 + L1MD1 LINE L1 867 2685 -3855 2077 151 0 0 chr10 116121391 116121695 -24195070 + AluJb SINE Alu 1 304 -8 6308 201 75 56 chr10 116121695 116122658 -24194107 + L1MD1 LINE L1 2685 3628 -2912 1077 248 15 6 chr10 116122672 116122999 -24193766 + L1MD1 LINE L1 4802 5131 -1409 212 139 0 23 chr10 116123019 116123036 -24193729 + (TATATG)n Simple_repeat Simple_repeat 3 19 -25 2113 148 48 0 chr10 116123036 116123366 -24193399 - MER7A DNA MER2_type -1 345 2 212 139 0 23 chr10 116123366 116123391 -24193374 + (TATATG)n Simple_repeat Simple_repeat 19 44 0 2438 58 0 52 chr10 116123512 116123838 -24192927 + AluY SINE Alu 1 309 -2 1785 154 25 0 chr10 116123859 116124173 -24192592 + AluSx SINE Alu 1 321 0 4644 170 39 73 chr10 116124198 116125111 -24191654 + L1MD1 LINE L1 5149 6091 -545 2192 73 10 33 chr10 116125111 116125414 -24191351 - AluY SINE Alu -15 296 1 4644 170 39 73 chr10 116125414 116125758 -24191007 + L1MD1 LINE L1 6091 6333 -303 4785 60 2 0 chr10 116125758 116126327 -24190438 + L1PA8 LINE L1 5600 6171 -1 4644 170 39 73 chr10 116126327 116126554 -24190211 + L1MD1 LINE L1 6333 6566 -70 267 31 0 0 chr10 116126967 116126999 -24189766 + (CA)n Simple_repeat Simple_repeat 2 33 0 2425 83 3 3 chr10 116127523 116127836 -24188929 + AluSq SINE Alu 1 313 0 1240 269 63 20 chr10 116128085 116128527 -24188238 - L1ME4a LINE L1 -168 5953 5493 2129 141 0 0 chr10 116128653 116128957 -24187808 - AluSx SINE Alu -8 304 1 866 252 59 5 chr10 116129672 116129894 -24186871 - MIR SINE MIR -19 243 10 481 263 50 12 chr10 116129929 116130089 -24186676 - MIR SINE MIR -8 254 89 768 184 0 0 chr10 116130842 116130956 -24185809 - FLAM_A SINE Alu -18 124 11 28 29 0 0 chr10 116130966 116131001 -24185764 + AT_rich Low_complexity Low_complexity 1 35 0 804 97 0 0 chr10 116131230 116131333 -24185432 - AluSg/x SINE Alu -11 298 196 3353 57 0 0 chr10 116231334 116231738 -24085027 - L1PA8 LINE L1 -162 6010 5607 855 204 134 30 chr10 116231746 116231977 -24084788 - MER77 LTR ERV1 -298 307 53 280 204 0 68 chr10 116232243 116232331 -24084434 - MIR SINE MIR -75 187 106 227 246 8 12 chr10 116232448 116232567 -24084198 + MIR SINE MIR 46 207 -55 183 354 0 0 chr10 116233049 116233097 -24083668 + L2 LINE L2 3134 3181 -91 2158 97 27 17 chr10 116233357 116233656 -24083109 - AluSp SINE Alu -11 302 1 249 272 123 9 chr10 116234047 116234161 -24082604 + MIR SINE MIR 24 150 -112 2160 131 123 26 chr10 116238881 116239228 -24077537 - MSTC LTR MaLR 0 428 38 2451 81 0 0 chr10 116239228 116239535 -24077230 - AluY SINE Alu -4 307 1 2160 131 123 26 chr10 116239535 116239577 -24077188 - MSTC LTR MaLR -390 38 1 416 265 71 46 chr10 116239858 116240054 -24076711 - L2 LINE L2 -1 3312 3112 283 314 64 58 chr10 116240492 116240648 -24076117 + MIR3 SINE MIR 39 195 -13 325 274 55 91 chr10 116240903 116241122 -24075643 + MIR SINE MIR 48 258 -4 2067 138 10 6 chr10 116241126 116241437 -24075328 - AluJo SINE Alu 0 312 1 207 289 0 36 chr10 116242770 116242853 -24073912 + CT-rich Low_complexity Low_complexity 1 80 0 1382 199 2 88 chr10 116243562 116243793 -24072972 - L1MC3 LINE L1 -12 7773 7589 2283 118 0 6 chr10 116243793 116244108 -24072657 - AluSq SINE Alu 0 313 1 1382 199 2 88 chr10 116244108 116244272 -24072493 - L1MC3 LINE L1 -196 7589 7412 871 271 9 5 chr10 116244282 116244496 -24072269 - MER58A DNA MER1_type -9 215 1 1454 211 152 20 chr10 116244496 116244988 -24071777 - L1MC4a LINE L1 -350 7458 6902 2300 101 3 0 chr10 116245900 116246235 -24070530 + AluSx SINE Alu 5 312 0 302 246 23 53 chr10 116247803 116247934 -24068831 + MIR SINE MIR 57 182 -62 802 196 6 6 chr10 116248270 116248428 -24068337 + FRAM SINE Alu 7 164 -12 2405 101 7 0 chr10 116248542 116248850 -24067915 + AluSx SINE Alu 1 310 -2 291 200 107 0 chr10 116249419 116249494 -24067271 + MIR SINE MIR 28 110 -98 407 238 119 49 chr10 116249629 116249772 -24066993 - L1ME3A LINE L1 -26 6144 5992 471 35 0 0 chr10 116249781 116249838 -24066927 + (TG)n Simple_repeat Simple_repeat 2 58 0 1081 246 31 28 chr10 116249941 116250258 -24066507 + MER46C DNA MER2_type 4 321 -17 1590 179 49 39 chr10 116250421 116250807 -24065958 - L1MD3 LINE L1 -16 7979 7590 966 152 6 12 chr10 116250811 116250982 -24065783 - L1MD1 LINE L1 0 6242 6073 506 268 62 10 chr10 116251023 116251217 -24065548 - L2 LINE L2 -9 3304 3101 6991 216 55 24 chr10 116251854 116251909 -24064856 - L1MB4 LINE L1 0 6180 6128 1911 174 0 0 chr10 116251909 116252213 -24064552 + AluJo SINE Alu 1 304 -8 6991 216 55 24 chr10 116252213 116252742 -24064023 - L1MB4 LINE L1 -52 6128 5617 1563 193 56 39 chr10 116252742 116253099 -24063666 + MLT1A1 LTR MaLR 1 363 -2 6991 216 55 24 chr10 116253099 116254630 -24062135 - L1MB4 LINE L1 -563 5617 3954 207 0 0 0 chr10 116254630 116254653 -24062112 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6991 216 55 24 chr10 116254653 116255236 -24061529 - L1MB4 LINE L1 -2226 3954 3391 22 0 0 0 chr10 116255424 116255446 -24061319 + AT_rich Low_complexity Low_complexity 1 22 0 579 187 139 12 chr10 116257687 116257853 -24058912 + MER5A DNA MER1_type 1 187 -2 586 259 63 11 chr10 116258540 116258729 -24058036 - L1ME3 LINE L1 -21 6141 5943 386 257 162 73 chr10 116258820 116259092 -24057673 + MER102a DNA MER1_type 35 330 0 213 222 37 0 chr10 116259179 116259233 -24057532 - L2 LINE L2 -22 3250 3195 208 239 0 42 chr10 116259438 116259509 -24057256 + L2 LINE L2 2998 3065 -248 2629 52 0 3 chr10 116259613 116259923 -24056842 - AluY SINE Alu -2 309 1 1960 143 0 32 chr10 116260973 116261288 -24055477 - AluSx SINE Alu -7 305 1 1079 90 0 39 chr10 116261533 116261688 -24055077 - Tigger7 DNA MER2_type 0 2491 2343 * 1939 204 3 0 chr10 116261683 116262026 -24054739 - Tigger7 DNA MER2_type -389 344 1 575 315 93 4 chr10 116262299 116262569 -24054196 - MLT1L LTR MaLR 0 615 322 2193 123 3 0 chr10 116262602 116262912 -24053853 + AluSx SINE Alu 1 311 -1 1106 206 114 15 chr10 116264127 116264231 -24052534 + AluJo SINE Alu 2 94 -208 216 0 0 0 chr10 116264231 116264255 -24052510 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1106 206 114 15 chr10 116264255 116264412 -24052353 + AluJo SINE Alu 94 289 -13 810 256 27 0 chr10 116264591 116264810 -24051955 + MIR SINE MIR 28 252 -10 228 86 0 0 chr10 116264848 116264883 -24051882 + (T)n Simple_repeat Simple_repeat 1 35 0 301 133 50 0 chr10 116264898 116264958 -24051807 - L1MD2 LINE L1 -2 6357 6295 2216 112 6 16 chr10 116264961 116265275 -24051490 + AluSq SINE Alu 1 311 -2 3734 163 27 42 chr10 116265312 116265698 -24051067 - L1MD2 LINE L1 -55 6304 5931 2090 152 0 0 chr10 116265698 116266001 -24050764 + AluSx SINE Alu 1 303 -9 3734 163 27 42 chr10 116266001 116266399 -24050366 - L1MD2 LINE L1 -428 5931 5529 763 244 56 0 chr10 116267056 116267269 -24049496 - MER97a DNA MER1_type? -9 885 661 * 1724 228 51 26 chr10 116267265 116267667 -24049098 - MER97b DNA MER1_type? -514 539 121 2162 133 3 3 chr10 116267667 116267975 -24048790 + AluSx SINE Alu 1 308 -4 1724 228 51 26 chr10 116267975 116268064 -24048701 - MER97b DNA MER1_type? -932 121 36 248 222 48 16 chr10 116268077 116268140 -24048625 + MIR SINE MIR 79 143 -65 559 215 114 7 chr10 116268349 116268498 -24048267 + L1MA3 LINE L1 6141 6305 0 926 192 11 11 chr10 116268558 116268735 -24048030 + MER45A DNA AcHobo 1 177 -1 1745 149 19 29 chr10 116270018 116270327 -24046438 - AluJo SINE Alu -6 306 1 287 302 32 8 chr10 116270779 116270905 -24045860 - MIR SINE MIR -1 261 133 1843 92 21 0 chr10 116271577 116271816 -24044949 + AluSg/x SINE Alu 67 310 -2 2180 108 0 0 chr10 116272943 116273222 -24043543 + AluSx SINE Alu 1 279 -33 207 313 48 0 chr10 116273805 116273888 -24042877 + MIR3 SINE MIR 108 194 -14 355 308 37 22 chr10 116274122 116274334 -24042431 - MIR3 SINE MIR -41 221 11 2091 134 3 0 chr10 116275426 116275733 -24041032 + AluSx SINE Alu 3 310 -2 678 201 55 168 chr10 116275998 116276415 -24040350 - MLT1I LTR MaLR -6 403 34 2023 121 16 16 chr10 116277090 116277395 -24039370 + AluY SINE Alu 1 305 -6 203 280 40 40 chr10 116278019 116278094 -24038671 + MIR SINE MIR 21 95 -167 605 291 100 60 chr10 116278137 116278686 -24038079 + MLT1K LTR MaLR 5 575 -13 339 208 56 0 chr10 116279093 116279165 -24037600 + L1MA5 LINE L1 6225 6300 0 252 0 0 0 chr10 116279184 116279212 -24037553 + (A)n Simple_repeat Simple_repeat 1 28 0 2028 137 17 3 chr10 116279212 116279512 -24037253 + AluSq SINE Alu 1 304 -9 540 237 74 7 chr10 116279531 116279666 -24037099 + MER77 LTR ERV1 458 601 -4 247 296 96 16 chr10 116279733 116279858 -24036907 - MIR SINE MIR -71 191 57 288 321 46 0 chr10 116282227 116282336 -24034429 + MIR SINE MIR 18 131 -131 2041 155 23 9 chr10 116282565 116282914 -24033851 + L1MB7 LINE L1 5287 5640 -538 1367 147 38 30 chr10 116282915 116283180 -24033585 + L1MB7 LINE L1 5911 6177 -7 2225 127 0 0 chr10 116283225 116283525 -24033240 - AluSx SINE Alu -12 300 1 2040 129 6 10 chr10 116283798 116284109 -24032656 + L1MC1 LINE L1 6024 6333 0 2325 196 16 17 chr10 116284770 116285295 -24031470 + Tigger7 DNA MER2_type 9 2485 -2 538 325 41 32 chr10 116285317 116285658 -24031107 - L1MC4a LINE L1 -1876 5932 5589 1772 150 60 74 chr10 116286719 116286864 -24029901 + MLT1A1 LTR MaLR 1 146 -219 2340 95 0 7 chr10 116286864 116287169 -24029596 + AluSq SINE Alu 1 303 -10 1772 150 60 74 chr10 116287169 116287390 -24029375 + MLT1A1 LTR MaLR 146 362 -3 1969 221 37 28 chr10 116287402 116287910 -24028855 - L1ME3A LINE L1 -37 6133 5621 249 319 28 14 chr10 116287985 116288057 -24028708 - L2 LINE L2 -35 3237 3165 1678 130 29 21 chr10 116288152 116288563 -24028202 - LTR46 LTR ERV1 0 460 1 393 232 0 80 chr10 116289276 116289401 -24027364 - L2 LINE L2 -5 3308 3194 184 225 50 0 chr10 116291688 116291768 -24024997 + L2 LINE L2 2966 3049 -223 316 274 71 9 chr10 116293194 116293307 -24023458 - MIR SINE MIR -54 208 89 227 114 23 0 chr10 116293508 116293552 -24023213 + (CA)n Simple_repeat Simple_repeat 2 46 0 2125 137 3 0 chr10 116293580 116293886 -24022879 - AluSx SINE Alu -5 307 1 488 286 66 31 chr10 116293997 116294224 -24022541 + MIR SINE MIR 3 237 -25 882 202 22 6 chr10 116294450 116294633 -24022132 + MER5A DNA MER1_type 1 186 -3 235 302 57 6 chr10 116295228 116295387 -24021378 + LTR33A LTR ERVL 24 190 -333 267 269 77 0 chr10 116295466 116295544 -24021221 + LTR33A LTR ERVL 436 519 -4 198 394 77 12 chr10 116295549 116295719 -24021046 + L2 LINE L2 3089 3269 -3 329 252 174 0 chr10 116295923 116296038 -24020727 - MLT1H LTR MaLR -16 533 399 775 246 38 6 chr10 116296102 116296352 -24020413 - MLT1H LTR MaLR -244 305 5 843 207 30 10 chr10 116296962 116297160 -24019605 + L1MD3 LINE L1 7784 7985 -10 279 54 0 0 chr10 116298636 116298673 -24018092 + (TC)n Simple_repeat Simple_repeat 2 38 0 852 201 89 47 chr10 116298685 116298899 -24017866 - L1MB5 LINE L1 -17 6157 5935 520 324 81 16 chr10 116298997 116299441 -24017324 + L1M4 LINE L1 3999 4471 -1675 364 301 64 18 chr10 116299750 116299969 -24016796 + L1M4 LINE L1 4918 5146 -1000 216 265 68 53 chr10 116300287 116300419 -24016346 + MIR3 SINE MIR 60 193 -15 1575 181 25 0 chr10 116301279 116301560 -24015205 + LTR64 LTR ERVK 1 288 -270 187 299 45 0 chr10 116301575 116301642 -24015123 + MIR SINE MIR 88 157 -105 4280 133 15 0 chr10 116301848 116302507 -24014258 - L1MC1 LINE L1 0 6333 5665 344 59 20 0 chr10 116302866 116302917 -24013848 + (TA)n Simple_repeat Simple_repeat 2 53 0 2298 74 25 0 chr10 116302917 116303202 -24013563 - AluSg SINE Alu -17 293 2 239 314 106 16 chr10 116303392 116303580 -24013185 - L1MEd LINE L1 -4576 1734 1530 1812 204 43 45 chr10 116303588 116304079 -24012686 - MLT1D LTR MaLR 0 505 16 619 296 63 26 chr10 116304111 116304659 -24012106 - L1MEd LINE L1 -4810 1500 895 21 36 0 0 chr10 116305513 116305541 -24011224 + AT_rich Low_complexity Low_complexity 1 28 0 182 339 0 0 chr10 116306268 116306327 -24010438 - L2 LINE L2 -8 3264 3206 347 274 53 18 chr10 116306429 116306542 -24010223 + 7SK RNA RNA 3 119 -74 393 189 52 126 chr10 116307895 116307986 -24008779 - L2 LINE L2 -5 3308 3237 2056 133 13 0 chr10 116307986 116308287 -24008478 - AluJb SINE Alu -7 305 1 393 189 52 126 chr10 116308287 116308386 -24008379 - L2 LINE L2 -76 3237 3132 825 196 38 0 chr10 116308620 116308778 -24007987 + MER3 DNA MER1_type 46 209 0 213 204 41 0 chr10 116309398 116309447 -24007318 + A-rich Low_complexity Low_complexity 1 51 0 2059 118 13 32 chr10 116310396 116310711 -24006054 - AluSg SINE Alu -1 309 1 35 54 0 0 chr10 116310726 116310782 -24005983 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr10 116310884 116310907 -24005858 + AT_rich Low_complexity Low_complexity 1 23 0 2237 111 6 16 chr10 116310933 116311249 -24005516 + AluSq SINE Alu 1 313 0 628 167 0 0 chr10 116311263 116311353 -24005412 + 5S rRNA rRNA 1 90 -31 289 261 184 43 chr10 116311359 116311593 -24005172 - L1ME4a LINE L1 -56 6065 5799 184 305 34 0 chr10 116311657 116311716 -24005049 - MIR SINE MIR -115 93 33 921 97 0 0 chr10 116312051 116312175 -24004590 + AluSq/x SINE Alu 6 129 -184 335 310 65 26 chr10 116312246 116312401 -24004364 + MIR SINE MIR 70 230 -32 254 225 50 75 chr10 116312423 116312503 -24004262 + L2 LINE L2 3191 3268 -4 216 0 0 0 chr10 116313873 116313897 -24002868 + (T)n Simple_repeat Simple_repeat 1 24 0 976 156 73 21 chr10 116313947 116314139 -24002626 - MER20 DNA MER1_type -4 215 14 204 125 0 0 chr10 116314384 116314416 -24002349 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6433 80 30 58 chr10 116316447 116318205 -23998560 - SVA Other Other -645 1385 2 573 227 117 37 chr10 116318999 116319162 -23997603 + MER5B DNA MER1_type 3 178 0 1567 190 0 3 chr10 116319657 116319952 -23996813 - AluJo SINE Alu -18 294 1 463 155 144 134 chr10 116320003 116320190 -23996575 + MER5A DNA MER1_type 1 189 0 384 271 69 60 chr10 116320309 116320475 -23996290 - MIR3 SINE MIR -2 206 35 1685 105 108 25 chr10 116321076 116321362 -23995403 - AluSx SINE Alu -2 310 1 294 260 77 156 chr10 116321392 116321731 -23995034 - L2 LINE L2 -29 3243 2932 1842 154 97 6 chr10 116322332 116322651 -23994114 + MER7A DNA MER2_type 1 346 0 230 301 96 0 chr10 116322777 116322850 -23993915 - MIR SINE MIR -72 190 111 * 599 288 39 54 chr10 116322840 116323045 -23993720 - MIR3 SINE MIR -1 207 6 332 361 52 29 chr10 116323951 116324167 -23992598 + MIR SINE MIR 14 230 -32 192 241 37 0 chr10 116324493 116324547 -23992218 + MIR SINE MIR 42 97 -111 187 104 42 0 chr10 116324587 116324635 -23992130 + T-rich Low_complexity Low_complexity 1 50 0 221 241 74 0 chr10 116324635 116324689 -23992076 + MIR3 SINE MIR 127 184 -24 666 263 225 16 chr10 116325743 116326059 -23990706 - MLT1K LTR MaLR -55 533 152 2497 157 60 42 chr10 116326241 116326737 -23990028 - MLT1D LTR MaLR 0 505 1 295 368 76 0 chr10 116327027 116327171 -23989594 - L2 LINE L2 -18 3254 3100 3691 189 113 14 chr10 116328970 116329748 -23987017 + MER21B LTR ERV1 1 855 -8 318 233 0 0 chr10 116329842 116329915 -23986850 - L1ME4a LINE L1 -211 5910 5838 403 292 24 38 chr10 116330129 116330338 -23986427 - L1ME4a LINE L1 -306 5815 5610 302 275 92 33 chr10 116330442 116330562 -23986203 - L1ME4a LINE L1 -2331 5477 5351 191 237 119 17 chr10 116332257 116332316 -23984449 + MIR SINE MIR 84 148 -114 611 249 14 104 chr10 116332457 116332678 -23984087 - MIR SINE MIR -60 202 2 699 246 27 32 chr10 116333397 116333584 -23983181 - L2 LINE L2 -10 3303 3118 3062 154 26 20 chr10 116333703 116334249 -23982516 - L1MB5 LINE L1 -42 6132 5584 610 187 115 29 chr10 116334870 116335009 -23981756 - AluJo/FRAM SINE Alu -7 305 155 315 119 0 0 chr10 116335010 116335052 -23981713 - Alu SINE Alu -261 42 1 271 219 78 0 chr10 116335285 116335349 -23981416 + MLT1K LTR MaLR 143 211 -377 1012 123 0 7 chr10 116335353 116335508 -23981257 + AluSc SINE Alu 146 299 -10 393 275 28 0 chr10 116336964 116337082 -23979683 + MIR SINE MIR 26 132 -76 1054 259 45 0 chr10 116337829 116338072 -23978693 - MIR SINE MIR 0 262 9 1223 133 44 44 chr10 116339350 116339388 -23977377 - AluJb SINE Alu 0 312 275 180 0 0 0 chr10 116339388 116339408 -23977357 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1223 133 44 44 chr10 116339408 116339595 -23977170 - AluJb SINE Alu -36 276 87 361 293 157 14 chr10 116340748 116340895 -23975870 + MIR3 SINE MIR 40 207 -1 627 236 27 72 chr10 116341935 116342067 -23974698 - L1MC4 LINE L1 -6 8036 7920 519 45 0 0 chr10 116342067 116342133 -23974632 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 627 236 27 72 chr10 116342133 116342263 -23974502 - L1MC4 LINE L1 -122 7920 7786 463 330 66 14 chr10 116342323 116342535 -23974230 - MIR SINE MIR -4 258 36 516 325 25 6 chr10 116343017 116343180 -23973585 - MIR3 SINE MIR -27 181 16 954 181 163 88 chr10 116343386 116343761 -23973004 - MER57A LTR ERV1 0 403 1 203 259 0 35 chr10 116344000 116344058 -23972707 + CT-rich Low_complexity Low_complexity 3 58 0 309 253 62 7 chr10 116346217 116346363 -23970402 - L1MC4 LINE L1 0 8042 7889 1265 172 0 47 chr10 116346440 116346696 -23970069 + AluJo SINE Alu 47 290 -22 745 306 37 30 chr10 116346696 116347069 -23969696 - L1MC4a LINE L1 -308 5813 5474 808 175 7 7 chr10 116347087 116347230 -23969535 + AluJb SINE Alu 145 287 -25 926 205 19 61 chr10 116349389 116349652 -23967113 - L1ME3 LINE L1 -2 6160 5909 249 308 0 0 chr10 116349870 116349935 -23966830 - L2 LINE L2 0 3313 3249 1303 222 89 116 chr10 116350415 116351079 -23965686 - L1ME3A LINE L1 -9 6161 5525 2226 87 7 0 chr10 116351079 116351377 -23965388 + AluSq SINE Alu 1 300 -13 1303 222 89 116 chr10 116351377 116351420 -23965345 - L1ME3A LINE L1 -645 5525 5482 1604 141 10 48 chr10 116351606 116351917 -23964848 - AluSc SINE Alu 0 300 1 302 201 55 73 chr10 116351928 116352092 -23964673 - L1ME3A LINE L1 -2610 5432 5272 276 287 10 0 chr10 116352087 116352188 -23964577 - L1MDa LINE L1 -3965 2575 2474 * 308 221 13 13 chr10 116352946 116353023 -23963742 + MIR SINE MIR 63 139 -123 564 261 64 6 chr10 116353200 116353357 -23963408 - MIR SINE MIR -56 206 41 183 365 27 0 chr10 116353424 116353488 -23963277 - MIR SINE MIR -91 117 52 485 227 175 7 chr10 116353488 116353642 -23963123 - MER5A DNA MER1_type 0 189 10 946 238 78 134 chr10 116353840 116354420 -23962345 - MLT1K LTR MaLR -24 564 18 509 182 30 73 chr10 116355959 116356021 -23960744 + L1MC5 LINE L1 7754 7817 -144 2395 116 84 27 chr10 116356021 116356062 -23960703 - MSTA LTR MaLR 0 428 391 2055 98 17 3 chr10 116356062 116356357 -23960408 + AluSx SINE Alu 1 299 -13 2395 116 84 27 chr10 116356357 116356720 -23960045 - MSTA LTR MaLR -37 391 1 509 182 30 73 chr10 116356720 116356822 -23959943 + L1MC5 LINE L1 7817 7911 -50 190 186 23 0 chr10 116357243 116357286 -23959479 - L2 LINE L2 -21 3251 3208 233 282 91 36 chr10 116358907 116359005 -23957760 + MIR3 SINE MIR 93 199 -9 1688 177 0 7 chr10 116359005 116359305 -23957460 + AluJo SINE Alu 1 298 -14 233 282 91 36 chr10 116359305 116359316 -23957449 + MIR3 SINE MIR 199 208 0 273 83 0 83 chr10 116359415 116359475 -23957290 - L1MB7 LINE L1 0 6184 6130 25 31 0 0 chr10 116359558 116359590 -23957175 + AT_rich Low_complexity Low_complexity 1 32 0 245 251 79 36 chr10 116359820 116359918 -23956847 + MIR SINE MIR 15 109 -114 268 302 35 0 chr10 116360003 116360089 -23956676 + MIR3 SINE MIR 108 196 -12 224 196 39 0 chr10 116360089 116360140 -23956625 + CT-rich Low_complexity Low_complexity 2 54 0 534 103 0 0 chr10 116360864 116360942 -23955823 + (TG)n Simple_repeat Simple_repeat 1 78 0 192 345 95 26 chr10 116361637 116361753 -23955012 + MIR3 SINE MIR 78 201 -7 889 245 39 43 chr10 116363111 116363344 -23953421 - MIR SINE MIR -6 256 25 2429 105 0 0 chr10 116363625 116363931 -23952834 + AluSq SINE Alu 1 306 -7 402 307 114 66 chr10 116364268 116364561 -23952204 - L2 LINE L2 -3 3269 2953 2318 95 0 13 chr10 116364561 116364866 -23951899 - AluSg SINE Alu -9 301 1 402 307 114 66 chr10 116364866 116364950 -23951815 - L2 LINE L2 -319 2953 2874 1578 216 14 39 chr10 116364967 116365380 -23951385 - LTR37A LTR ERV1 -5 421 19 271 263 175 26 chr10 116366156 116366350 -23950415 + L2 LINE L2 2891 3113 -200 267 301 60 0 chr10 116366364 116366576 -23950189 + (CACCC)n Simple_repeat Simple_repeat 1 224 0 726 276 9 36 chr10 116366611 116366836 -23949929 + L2 LINE L2 3094 3312 -1 184 257 193 28 chr10 116366822 116366931 -23949834 + MIR SINE MIR 17 143 -119 * 269 261 97 62 chr10 116367209 116367385 -23949380 - MER102b DNA MER1_type -27 314 133 480 313 63 83 chr10 116367604 116368070 -23948695 - L2 LINE L2 -57 3215 2742 2396 92 0 35 chr10 116368070 116368386 -23948379 + AluSq SINE Alu 1 305 -8 480 313 63 83 chr10 116368386 116368522 -23948243 - L2 LINE L2 -530 2742 2605 634 232 82 53 chr10 116369295 116369502 -23947263 - MER58C DNA MER1_type -2 213 1 584 280 7 0 chr10 116369901 116370044 -23946721 + MIR SINE MIR 65 208 -54 214 255 0 0 chr10 116371054 116371101 -23945664 - L2 LINE L2 0 3313 3267 237 65 0 0 chr10 116373500 116373531 -23943234 + (T)n Simple_repeat Simple_repeat 1 31 0 1924 148 0 30 chr10 116373794 116374099 -23942666 - AluJo SINE Alu -16 296 1 308 290 43 0 chr10 116374520 116374613 -23942152 + MIR SINE MIR 43 139 -69 210 250 0 36 chr10 116375289 116375345 -23941420 - L2 LINE L2 0 3272 3219 491 311 121 26 chr10 116375605 116375812 -23940953 - L1MC4a LINE L1 -1875 5933 5747 665 223 120 50 chr10 116375812 116376054 -23940711 - MIR SINE MIR -2 260 2 491 311 121 26 chr10 116376054 116376302 -23940463 - L1MC4a LINE L1 -2061 5747 5435 476 220 40 20 chr10 116376304 116376321 -23940444 - L1MA10 LINE L1 -2 6332 6316 1267 213 54 52 chr10 116376321 116376642 -23940123 - L1ME2 LINE L1 -9 6155 5831 2202 121 0 31 chr10 116376642 116376965 -23939800 - AluSq SINE Alu 0 313 1 1267 213 54 52 chr10 116376965 116377070 -23939695 - L1ME2 LINE L1 -333 5831 5728 263 182 182 0 chr10 116377168 116377223 -23939542 - MIR SINE MIR -65 143 79 1338 152 16 58 chr10 116377233 116377490 -23939275 + AluJb SINE Alu 67 312 0 710 308 47 4 chr10 116377584 116377818 -23938947 + MIR SINE MIR 19 262 0 441 234 32 0 chr10 116378739 116378833 -23937932 - MIR SINE MIR -109 153 57 283 60 40 0 chr10 116378880 116378930 -23937835 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 231 241 38 25 chr10 116380124 116380203 -23936562 - MIR3 SINE MIR -47 161 82 386 227 44 47 chr10 116380916 116381070 -23935695 - MIR SINE MIR -67 141 33 263 279 164 8 chr10 116381344 116381466 -23935299 + L2 LINE L2 2830 2970 -302 225 0 0 0 chr10 116381739 116381764 -23935001 + (A)n Simple_repeat Simple_repeat 1 25 0 645 272 42 31 chr10 116381787 116381978 -23934787 - L2 LINE L2 -1 3312 3120 734 194 40 11 chr10 116381989 116382164 -23934601 - MER104 DNA MER2_type 0 180 1 261 313 80 55 chr10 116382451 116382614 -23934151 + MER5B DNA MER1_type 6 172 -6 356 371 40 13 chr10 116382628 116382779 -23933986 - MIR3 SINE MIR -48 160 6 222 264 0 19 chr10 116383068 116383121 -23933644 - MIR3 SINE MIR -5 203 152 2358 106 0 0 chr10 116383181 116383483 -23933282 + AluSg SINE Alu 1 302 -8 247 325 8 57 chr10 116384478 116384601 -23932164 - MIR SINE MIR -60 148 76 524 306 181 0 chr10 116384610 116384826 -23931939 - MIR SINE MIR 0 262 8 333 271 10 10 chr10 116385266 116385362 -23931403 + MIR SINE MIR 166 261 -1 308 229 43 14 chr10 116385366 116385395 -23931370 + L1ME4a LINE L1 6032 6059 -62 2452 77 6 3 chr10 116385395 116385706 -23931059 - AluSp SINE Alu 0 313 2 308 229 43 14 chr10 116385706 116385746 -23931019 + L1ME4a LINE L1 6059 6103 -18 213 108 0 0 chr10 116386047 116386084 -23930681 + (CTG)n Simple_repeat Simple_repeat 3 39 0 225 289 0 24 chr10 116386272 116386355 -23930410 + CT-rich Low_complexity Low_complexity 1 81 0 1568 99 97 15 chr10 116387960 116388372 -23928393 + LTR54 LTR ERV1 1 508 -2 24 0 0 0 chr10 116388918 116388942 -23927823 + AT_rich Low_complexity Low_complexity 1 24 0 2504 77 0 3 chr10 116390014 116390314 -23926451 + AluSc SINE Alu 3 301 -8 328 191 88 0 chr10 116390900 116390968 -23925797 - MER91C DNA MER1_type -36 104 31 1852 176 17 7 chr10 116391244 116391546 -23925219 - AluJo SINE Alu -6 306 2 522 316 33 0 chr10 116391670 116391822 -23924943 - MIR3 SINE MIR -15 193 37 473 250 43 38 chr10 116391936 116392120 -23924645 - MER5A DNA MER1_type -4 185 1 724 253 28 11 chr10 116392728 116392906 -23923859 - MIR SINE MIR -80 182 2 253 317 50 10 chr10 116394330 116394431 -23922334 + MIR SINE MIR 33 137 -71 347 351 73 20 chr10 116394701 116394949 -23921816 + L2 LINE L2 2804 3064 -208 2257 60 0 0 chr10 116395030 116395296 -23921469 - AluY SINE Alu -7 304 39 234 276 172 45 chr10 116395333 116395467 -23921298 + L2 LINE L2 3122 3272 0 202 333 0 0 chr10 116397427 116397490 -23919275 + (TG)n Simple_repeat Simple_repeat 1 63 0 450 215 43 31 chr10 116398038 116398201 -23918564 - MER104 DNA Tc2 -2 178 14 2157 130 3 0 chr10 116398516 116398817 -23917948 + AluSx SINE Alu 1 302 -10 318 292 14 28 chr10 116399163 116399307 -23917458 - L2 LINE L2 -1219 2095 1954 548 296 101 24 chr10 116399923 116400210 -23916555 + MLT1K LTR MaLR 12 320 -268 760 185 185 0 chr10 116400211 116400362 -23916403 + Charlie1a DNA MER1_type 1 179 -1276 371 250 68 45 chr10 116400432 116400564 -23916201 + MER91C DNA MER1_type 6 140 0 372 267 35 26 chr10 116400849 116400965 -23915800 + L2 LINE L2 3197 3313 0 201 129 0 0 chr10 116401507 116401538 -23915227 + (GA)n Simple_repeat Simple_repeat 2 32 0 526 182 220 0 chr10 116401566 116401698 -23915067 + Cheshire DNA MER1_type 1 161 -2259 * 1186 175 60 4 chr10 116401692 116401961 -23914804 + Cheshire DNA MER1_type 2076 2359 -61 1028 177 57 10 chr10 116401976 116402168 -23914597 - AluJb SINE Alu -22 290 90 210 336 86 0 chr10 116402288 116402404 -23914361 - L2 LINE L2 0 3272 3147 284 293 53 53 chr10 116403336 116403486 -23913279 + MIR SINE MIR 2 151 -111 649 313 163 11 chr10 116403665 116404231 -23912534 - L1MC4a LINE L1 -1899 5909 5258 465 325 98 39 chr10 116404304 116404651 -23912114 - L1MC4a LINE L1 -853 5293 4930 341 263 132 0 chr10 116404792 116404906 -23911859 + L1ME4a LINE L1 5988 6116 -5 2145 132 3 3 chr10 116405356 116405660 -23911105 + AluSq SINE Alu 1 304 -9 6446 14 0 6 chr10 116406279 116407107 -23909658 + L1PA2 LINE L1 5189 6011 -144 1483 206 27 10 chr10 116407508 116407804 -23908961 - AluJo SINE Alu -11 301 1 22 0 0 0 chr10 116409349 116409371 -23907394 + AT_rich Low_complexity Low_complexity 1 22 0 908 144 50 0 chr10 116409371 116409552 -23907213 - L1MA9 LINE L1 0 6312 6123 2220 123 7 0 chr10 116410002 116410330 -23906435 - AluSx SINE Alu 0 331 2 322 342 47 21 chr10 116410455 116410648 -23906117 - MIR SINE MIR -7 255 58 546 275 110 5 chr10 116411061 116411261 -23905504 + MIR SINE MIR 2 222 -40 2993 87 7 0 chr10 116411974 116412398 -23904367 + L1P LINE L1 4088 4514 -1632 * 17211 48 0 3 chr10 116412395 116414686 -23902079 - L1P LINE L1 -1149 4997 2714 442 298 138 6 chr10 116415023 116415204 -23901561 + MIR SINE MIR 33 237 -25 325 252 45 45 chr10 116415446 116415592 -23901173 + L1MC/D LINE L1 5055 5203 -943 963 192 0 6 chr10 116415592 116415759 -23901006 + FRAM SINE Alu 1 166 0 376 123 31 0 chr10 116415771 116415836 -23900929 + Alu SINE Alu 234 300 0 718 295 79 42 chr10 116415957 116416428 -23900337 + L1MC/D LINE L1 5327 5814 -1994 1898 43 4 50 chr10 116416991 116417270 -23899495 + L1PA2 LINE L1 5888 6153 -2 246 320 21 21 chr10 116417418 116417515 -23899250 - MIR SINE MIR -62 146 70 246 339 119 42 chr10 116418456 116418692 -23898073 + L2 LINE L2 3014 3267 -5 233 290 16 16 chr10 116418808 116418870 -23897895 - MIR3 SINE MIR -32 176 115 228 260 6 113 chr10 116418888 116418948 -23897817 - MIR SINE MIR -68 140 120 2402 113 0 0 chr10 116418948 116419258 -23897507 - AluSg SINE Alu 0 310 1 228 260 6 113 chr10 116419258 116419349 -23897416 - MIR SINE MIR -88 120 21 489 270 141 22 chr10 116419866 116420051 -23896714 + MIR SINE MIR 48 254 -8 326 207 41 7 chr10 116420332 116420477 -23896288 + (TG)n Simple_repeat Simple_repeat 1 150 0 245 275 56 20 chr10 116420606 116420722 -23896043 - MIR SINE MIR -72 136 39 263 340 126 57 chr10 116421350 116421612 -23895153 - L2 LINE L2 -1 3271 2992 663 308 45 13 chr10 116421656 116421880 -23894885 - MIR SINE MIR -13 249 19 22 0 0 0 chr10 116421897 116421919 -23894846 + AT_rich Low_complexity Low_complexity 1 22 0 263 253 0 13 chr10 116422132 116422207 -23894558 - L1MC/D LINE L1 -1940 5868 5795 302 314 0 0 chr10 116423309 116423379 -23893386 - MIR SINE MIR -109 99 30 459 277 26 0 chr10 116423456 116423611 -23893154 + MER103 DNA DNA 7 165 -1 2536 136 14 76 chr10 116423981 116424468 -23892297 - LTR32 LTR ERVL 0 471 15 573 303 37 6 chr10 116426403 116426565 -23890200 + MIR3 SINE MIR 33 199 -9 2218 113 0 7 chr10 116427271 116427571 -23889194 - AluSx SINE Alu -14 298 1 277 307 0 93 chr10 116427638 116427788 -23888977 - MIR3 SINE MIR -7 201 66 251 168 26 124 chr10 116428623 116428654 -23888111 - MER103 DNA DNA -63 103 71 2153 136 0 0 chr10 116428654 116428962 -23887803 + AluSq SINE Alu 1 308 -5 251 168 26 124 chr10 116428962 116429043 -23887722 - MER103 DNA DNA -95 71 2 288 316 114 25 chr10 116429104 116429262 -23887503 - MIR3 SINE MIR -28 180 9 1922 155 0 3 chr10 116429915 116430219 -23886546 + AluJb SINE Alu 1 303 -9 1650 167 9 50 chr10 116430419 116430742 -23886023 + AluJb SINE Alu 3 312 0 213 39 0 0 chr10 116430968 116430994 -23885771 + (TG)n Simple_repeat Simple_repeat 1 26 0 430 289 90 6 chr10 116434156 116434322 -23882443 + MIR SINE MIR 33 212 -50 1410 149 5 14 chr10 116436175 116436397 -23880368 - AluJb SINE Alu -7 305 86 21 57 0 0 chr10 116436856 116436891 -23879874 + AT_rich Low_complexity Low_complexity 1 35 0 288 159 0 0 chr10 116437338 116437382 -23879383 + MER3 DNA MER1_type 47 90 -119 429 167 13 26 chr10 116437382 116437460 -23879305 - FRAM/FAM SINE Alu -99 77 1 752 106 83 7 chr10 116437460 116437677 -23879088 + MER33 DNA MER1_type 30 316 -8 259 317 90 12 chr10 116437865 116438032 -23878733 + MIR SINE MIR 71 250 -12 226 263 211 26 chr10 116438778 116438930 -23877835 + MIR SINE MIR 49 228 -34 220 308 158 61 chr10 116439381 116439473 -23877292 - L2 LINE L2 -452 2862 2780 2127 84 49 3 chr10 116439473 116439759 -23877006 + AluY SINE Alu 1 299 -12 220 308 158 61 chr10 116439759 116439913 -23876852 - L2 LINE L2 -534 2780 2592 399 253 152 13 chr10 116440757 116440915 -23875850 + MIR SINE MIR 77 256 -6 354 213 0 0 chr10 116441164 116441244 -23875521 + MER116 DNA Mariner 1 80 0 323 224 145 0 chr10 116442094 116442170 -23874595 + L2 LINE L2 3221 3307 -6 319 187 96 160 chr10 116443621 116443808 -23872957 - L1MC5 LINE L1 -30 7931 7757 1338 187 15 40 chr10 116444088 116444361 -23872404 + Tigger7 DNA MER2_type 2 267 -466 462 177 21 10 chr10 116444359 116444455 -23872310 + Tigger7 DNA MER2_type 2389 2485 -2 * 25 31 0 0 chr10 116444881 116444913 -23871852 + AT_rich Low_complexity Low_complexity 1 32 0 1721 163 4 7 chr10 116444913 116445183 -23871582 - AluJo SINE Alu -43 269 1 51 58 0 0 chr10 116445678 116445764 -23871001 + AT_rich Low_complexity Low_complexity 1 86 0 183 367 50 0 chr10 116446208 116446268 -23870497 - L2 LINE L2 -94 3178 3116 237 319 29 0 chr10 116446693 116446762 -23870003 + MIR SINE MIR 21 91 -171 251 264 81 0 chr10 116446798 116446885 -23869880 + MIR SINE MIR 163 256 -6 1475 159 127 7 chr10 116447181 116447489 -23869276 + MER7A DNA MER2_type 2 344 -2 21 36 0 0 chr10 116447718 116447746 -23869019 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 116448731 116448755 -23868010 + AT_rich Low_complexity Low_complexity 1 24 0 259 262 160 5 chr10 116448790 116448977 -23867788 - L1ME LINE L1 -266 5855 5640 2174 66 30 0 chr10 116449062 116449333 -23867432 + AluSg SINE Alu 26 304 -6 332 301 0 12 chr10 116449335 116449418 -23867347 - L2 LINE L2 -25 3247 3166 316 268 72 21 chr10 116449945 116450042 -23866723 + MIR3 SINE MIR 97 198 -10 22 35 0 0 chr10 116450917 116450946 -23865819 + AT_rich Low_complexity Low_complexity 1 29 0 2149 96 0 7 chr10 116451233 116451514 -23865251 + AluSx SINE Alu 24 302 -10 180 77 0 0 chr10 116451745 116451771 -23864994 + (TG)n Simple_repeat Simple_repeat 2 27 0 1528 171 53 48 chr10 116451940 116452373 -23864392 + L1M4 LINE L1 4135 4569 -1577 3258 151 39 10 chr10 116452671 116453255 -23863510 + MER7C DNA MER2_type 1 601 -1 4113 147 7 11 chr10 116455151 116455852 -23860913 - L1PA16 LINE L1 -1 6165 5468 426 240 8 50 chr10 116456451 116456572 -23860193 - MIR SINE MIR -128 134 19 30 59 0 0 chr10 116457793 116457844 -23858921 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 116458040 116458061 -23858704 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 116458246 116458266 -23858499 + (T)n Simple_repeat Simple_repeat 1 20 0 2215 105 10 3 chr10 116459603 116459899 -23856866 + AluSp SINE Alu 1 298 -15 1321 194 39 28 chr10 116461094 116461377 -23855388 + AluJo SINE Alu 5 290 -22 1235 165 45 91 chr10 116463709 116464113 -23852652 - Tigger3(Golem) DNA MER2_type -1 3028 11 455 292 187 27 chr10 116464314 116464571 -23852194 - L2 LINE L2 -3 3310 3013 384 239 151 72 chr10 116464684 116464935 -23851830 + L1MC4a LINE L1 5560 5830 -1978 2315 58 4 0 chr10 116465368 116465646 -23851119 + AluY SINE Alu 1 279 -32 1234 183 143 21 chr10 116465771 116466092 -23850673 - Charlie2 DNA MER1_type -1 2861 2581 2441 53 0 13 chr10 116466092 116466392 -23850373 - AluY SINE Alu -15 296 1 1234 183 143 21 chr10 116466392 116466646 -23850119 - Charlie2 DNA MER1_type -281 2581 2359 2339 93 0 0 chr10 116466646 116466946 -23849819 - AluSx SINE Alu -12 300 1 1234 183 143 21 chr10 116466946 116467164 -23849601 - Charlie2 DNA MER1_type -503 2359 1874 518 291 14 105 chr10 116467189 116467324 -23849441 - Charlie2 DNA MER1_type -2542 320 174 1838 162 16 10 chr10 116467324 116467627 -23849138 + AluJo SINE Alu 6 310 -2 518 291 14 105 chr10 116467627 116467835 -23848930 - Charlie2 DNA MER1_type -2688 174 8 369 215 61 55 chr10 116467896 116468059 -23848706 + MER103 DNA DNA 3 166 0 2203 92 7 7 chr10 116469291 116469585 -23847180 - AluSx SINE Alu -18 294 1 304 328 85 87 chr10 116469975 116470681 -23846084 - L2 LINE L2 0 3272 2565 329 298 99 0 chr10 116471099 116471250 -23845515 + MIR SINE MIR 97 262 0 190 277 109 80 chr10 116471758 116471895 -23844870 - MIR3 SINE MIR -66 142 1 228 67 0 0 chr10 116472234 116472264 -23844501 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 309 305 106 7 chr10 116473235 116473386 -23843379 + MIR SINE MIR 51 216 -46 781 265 96 36 chr10 116473915 116474217 -23842548 + MER102a DNA MER1_type 6 325 -5 274 306 9 63 chr10 116475131 116475242 -23841523 + MER5A DNA MER1_type 2 106 -83 1858 171 10 0 chr10 116475245 116475543 -23841222 - AluJb SINE Alu -9 303 3 1943 156 10 0 chr10 116475796 116476091 -23840674 - AluSx SINE Alu -13 299 2 227 311 107 29 chr10 116476117 116476220 -23840545 - MIR SINE MIR -150 112 2 242 244 85 0 chr10 116477188 116477270 -23839495 + L1MC4 LINE L1 7544 7632 -410 216 0 0 0 chr10 116477286 116477310 -23839455 + (T)n Simple_repeat Simple_repeat 1 24 0 237 255 38 19 chr10 116477531 116477637 -23839128 + L1MC5 LINE L1 7810 7917 -44 268 192 26 26 chr10 116479580 116479658 -23837107 + (CGGGG)n Simple_repeat Simple_repeat 1 78 0 325 304 170 36 chr10 116479839 116480250 -23836515 - L1M2 LINE L1 -5858 991 526 230 122 0 41 chr10 116480732 116480781 -23835984 + (TTTTC)n Simple_repeat Simple_repeat 3 49 0 1486 104 93 11 chr10 116481768 116482038 -23834727 - L1MA3 LINE L1 0 6305 6014 21 82 0 0 chr10 116482094 116482143 -23834622 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr10 116483398 116483423 -23833342 + AT_rich Low_complexity Low_complexity 1 25 0 30 27 0 0 chr10 116483574 116483611 -23833154 + AT_rich Low_complexity Low_complexity 1 37 0 250 383 97 7 chr10 116484368 116484522 -23832243 - L2 LINE L2 -1 3271 3104 23 0 0 0 chr10 116484770 116484793 -23831972 + AT_rich Low_complexity Low_complexity 1 23 0 2334 98 0 3 chr10 116485011 116485316 -23831449 + AluSx SINE Alu 1 304 -8 1863 165 3 16 chr10 116485664 116485980 -23830785 - AluJb SINE Alu 0 312 1 24 0 0 0 chr10 116486141 116486165 -23830600 + AT_rich Low_complexity Low_complexity 1 24 0 325 337 73 66 chr10 116486267 116486555 -23830210 + L2 LINE L2 2979 3268 -4 1959 127 0 0 chr10 116488258 116488525 -23828240 + AluSx SINE Alu 1 267 -45 1757 168 3 0 chr10 116488840 116489125 -23827640 + AluJb SINE Alu 4 289 -23 1569 199 55 28 chr10 116489704 116490066 -23826699 - MLT1A2 LTR MaLR -2 372 1 632 320 89 52 chr10 116492033 116492835 -23823930 - L2 LINE L2 -5 3267 2441 360 288 131 72 chr10 116492862 116493098 -23823667 + L2 LINE L2 3018 3267 -5 25 0 0 0 chr10 116493105 116493130 -23823635 + AT_rich Low_complexity Low_complexity 1 25 0 232 239 166 37 chr10 116493441 116493604 -23823161 - L1ME4a LINE L1 -1 6120 5937 426 234 78 105 chr10 116493729 116493876 -23822889 - MER102a DNA MER1_type -1097 320 181 993 158 6 28 chr10 116493876 116494053 -23822712 + FAM SINE Alu 1 173 -2 426 234 78 105 chr10 116494053 116494162 -23822603 - MER102a DNA MER1_type -1236 181 71 467 214 86 120 chr10 116494326 116494593 -23822172 + L1ME LINE L1 5534 5791 -330 303 219 194 13 chr10 116494719 116494874 -23821891 - L1ME4a LINE L1 -299 5822 5640 497 192 178 57 chr10 116495248 116495350 -23821415 - L1MC4a LINE L1 -1829 6477 6389 557 259 86 16 chr10 116495350 116495593 -23821172 - MIR SINE MIR 0 262 3 497 192 178 57 chr10 116495593 116495771 -23820994 - L1MC4a LINE L1 -1917 6389 6163 415 252 222 4 chr10 116496007 116496273 -23820492 - HAL1b LINE L1 -477 871 548 2310 72 3 23 chr10 116496319 116496626 -23820139 - AluSq SINE Alu -12 301 1 502 256 13 13 chr10 116497296 116497452 -23819313 - FRAM SINE Alu -7 159 4 780 188 51 110 chr10 116497503 116497723 -23819042 - L1MC4a LINE L1 -743 5901 5670 1886 113 39 0 chr10 116497723 116497980 -23818785 - AluSx SINE Alu -44 268 2 780 188 51 110 chr10 116497980 116498381 -23818384 - L1MC4a LINE L1 -974 5670 5414 1331 224 43 6 chr10 116498381 116498703 -23818062 - Charlie1 DNA MER1_type -526 2235 1902 955 202 0 0 chr10 116498703 116498871 -23817894 - FRAM SINE Alu -8 168 1 421 167 39 0 chr10 116498871 116498949 -23817816 - Charlie1 DNA MER1_type -857 1904 1824 2574 211 64 61 chr10 116499046 116499893 -23816872 - L1MC4a LINE L1 -4606 2040 1192 4030 205 57 84 chr10 116500754 116501978 -23814787 - L1MC4a LINE L1 -5351 1191 1 909 271 141 33 chr10 116502690 116503250 -23813515 - L2 LINE L2 -1 3312 2695 1677 249 16 31 chr10 116503255 116503891 -23812874 + L1MA9 LINE L1 1 1988 -5042 10648 224 78 30 chr10 116503920 116505188 -23811577 + L1MA9 LINE L1 2754 3961 -3311 1206 123 64 41 chr10 116505188 116505408 -23811357 - MER30 DNA MER1_type -1 229 5 10648 224 78 30 chr10 116505408 116508006 -23808759 + L1MA9 LINE L1 3961 6804 -468 1503 140 44 9 chr10 116508012 116508241 -23808524 - AluSx SINE Alu -75 237 1 1624 205 35 16 chr10 116508471 116508837 -23807928 - L1MC1 LINE L1 0 6333 5961 * 5481 94 5 8 chr10 116508830 116509617 -23807148 - L1PA8 LINE L1 0 6172 5388 1987 143 34 0 chr10 116509601 116509950 -23806815 - L1MC1 LINE L1 -368 5976 5616 * 207 204 0 0 chr10 116509987 116510031 -23806734 + (TA)n Simple_repeat Simple_repeat 2 45 0 37 23 0 0 chr10 116510166 116510210 -23806555 + AT_rich Low_complexity Low_complexity 1 44 0 33 56 0 0 chr10 116510443 116510497 -23806268 + AT_rich Low_complexity Low_complexity 1 54 0 206 326 0 54 chr10 116510586 116510678 -23806087 + MIR3 SINE MIR 3 89 -119 927 280 95 79 chr10 116510815 116511735 -23805030 - L2 LINE L2 -32 3281 2360 1535 63 4 122 chr10 116512476 116512731 -23804034 - AluSq SINE Alu -19 294 70 201 337 45 22 chr10 116513520 116513609 -23803156 + MIR SINE MIR 33 123 -85 2331 102 3 0 chr10 116514492 116514795 -23801970 - AluSc SINE Alu -5 304 1 247 276 0 58 chr10 116514883 116514970 -23801795 + L2 LINE L2 2222 2303 -1011 326 209 283 6 chr10 116515182 116515359 -23801406 - MER20B DNA MER1_type 0 783 558 518 253 66 7 chr10 116515366 116515798 -23800967 - MER20B DNA MER1_type -159 624 39 374 256 71 65 chr10 116515851 116516019 -23800746 - MER5B DNA MER1_type 0 178 10 952 223 47 5 chr10 116516419 116516634 -23800131 + MER58A DNA MER1_type 1 224 0 283 236 181 43 chr10 116516717 116516859 -23799906 + MIR SINE MIR 25 165 -43 2163 103 10 3 chr10 116516959 116517260 -23799505 - AluSx SINE Alu -9 303 1 31 26 0 0 chr10 116518132 116518170 -23798595 + AT_rich Low_complexity Low_complexity 1 38 0 334 232 84 42 chr10 116518248 116518343 -23798422 - MER5A DNA MER1_type -49 140 42 233 281 22 34 chr10 116519657 116519672 -23797093 + MER5A DNA MER1_type 1 14 -175 272 308 26 13 chr10 116519672 116519750 -23797015 - MER5A DNA MER1_type -2 187 109 728 250 73 40 chr10 116519890 116520138 -23796627 + MIR SINE MIR 7 262 0 485 308 58 38 chr10 116523387 116523596 -23793169 - MIR SINE MIR -34 228 17 258 257 105 19 chr10 116523608 116523713 -23793052 - MER5B DNA MER1_type -64 114 1 3979 172 18 4 chr10 116523738 116524498 -23792267 - L1MB8 LINE L1 -3 6175 5405 37 0 0 0 chr10 116524809 116524846 -23791919 + AT_rich Low_complexity Low_complexity 1 37 0 831 170 25 13 chr10 116524936 116525095 -23791670 + FRAM SINE Alu 1 158 -18 5467 138 45 40 chr10 116526186 116528049 -23788716 - L1MA5 LINE L1 -13 6287 4421 27 87 0 0 chr10 116528383 116528452 -23788313 + AT_rich Low_complexity Low_complexity 1 69 0 924 135 57 0 chr10 116528875 116529016 -23787749 + AluJb SINE Alu 33 181 -131 2202 239 90 21 chr10 116529302 116529765 -23787000 - L1MEc LINE L1 -2366 3849 3419 200 33 0 33 chr10 116529765 116529795 -23786970 + (TA)n Simple_repeat Simple_repeat 1 29 0 2202 239 90 21 chr10 116529795 116530344 -23786421 - L1MEc LINE L1 -2796 3419 2686 314 187 80 0 chr10 116530381 116530456 -23786309 - L1MEc LINE L1 -4018 2378 2298 721 239 31 57 chr10 116530461 116530813 -23785952 - L1MEc LINE L1 -4213 2183 1841 1994 239 33 60 chr10 116530822 116531058 -23785707 - L1MC4a LINE L1 0 7808 7567 2225 60 46 0 chr10 116531058 116531341 -23785424 - AluY SINE Alu -15 296 1 1994 239 33 60 chr10 116531341 116531800 -23784965 - L1MC4a LINE L1 -241 7567 7132 2200 121 3 0 chr10 116531804 116532109 -23784656 - AluSq SINE Alu -7 306 1 554 271 78 42 chr10 116532114 116532216 -23784549 - L1MEc LINE L1 -4653 1743 1646 1795 173 3 3 chr10 116532216 116532511 -23784254 - AluJb SINE Alu -17 295 1 554 271 78 42 chr10 116532511 116533159 -23783606 - L1MEc LINE L1 -4750 1646 1023 2114 89 25 3 chr10 116533159 116533441 -23783324 - AluSp SINE Alu -21 292 5 554 271 78 42 chr10 116533441 116534179 -23782586 - L1MEc LINE L1 -5373 1023 75 417 273 78 102 chr10 116534456 116534846 -23781919 - L1ME LINE L1 -5540 876 497 1821 235 83 34 chr10 116534846 116535411 -23781354 - MLT1E LTR MaLR 0 593 1 417 273 78 102 chr10 116535411 116535492 -23781273 - L1ME LINE L1 -5919 497 416 492 211 16 49 chr10 116535802 116535925 -23780840 + MER5C DNA MER1_type 6 124 -200 254 330 45 0 chr10 116535951 116536039 -23780726 + MER5C DNA MER1_type 233 324 0 2202 46 8 0 chr10 116536059 116536322 -23780443 - AluY SINE Alu -12 299 35 275 354 73 43 chr10 116536366 116536668 -23780097 + L2 LINE L2 2556 2866 -448 284 245 37 149 chr10 116536702 116536971 -23779794 + L2 LINE L2 3075 3313 0 287 272 59 44 chr10 116537119 116537255 -23779510 + L2 LINE L2 3176 3313 0 539 260 132 5 chr10 116537268 116537472 -23779293 - L1ME LINE L1 -6177 249 20 * 1005 225 36 22 chr10 116537466 116537742 -23779023 - L1M4 LINE L1 -2114 4032 3753 282 29 0 0 chr10 116537744 116537779 -23778986 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 7390 16 0 0 chr10 116537779 116538626 -23778139 - L1PA3 LINE L1 -24 6131 5285 2179 237 55 37 chr10 116538621 116539402 -23777363 - L1M4 LINE L1 -2389 3757 2963 * 4705 166 36 17 chr10 116539399 116540434 -23776331 - L1MB4 LINE L1 0 6180 5121 21 0 0 0 chr10 116541375 116541396 -23775369 + AT_rich Low_complexity Low_complexity 1 21 0 2067 115 0 13 chr10 116542371 116542675 -23774090 - AluSx SINE Alu -10 302 3 24 0 0 0 chr10 116543149 116543173 -23773592 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 116543924 116543946 -23772819 + AT_rich Low_complexity Low_complexity 1 22 0 2745 220 133 11 chr10 116544098 116544830 -23771935 - L1MB4 LINE L1 -2467 3679 2809 540 115 0 0 chr10 116544830 116544908 -23771857 + MADE1 DNA Mariner 1 78 -2 2745 220 133 11 chr10 116544908 116545097 -23771668 - L1MB4 LINE L1 -3337 2809 2645 567 273 109 63 chr10 116545244 116545655 -23771110 - HAL1b LINE L1 -642 706 277 2246 130 155 37 chr10 116546029 116546564 -23770201 + pTR5 LTR ERV1 1285 2025 -413 375 179 0 36 chr10 116546564 116546648 -23770117 + LTR30 LTR ERV1 544 624 -98 182 61 0 30 chr10 116546652 116546685 -23770080 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 403 353 14 36 chr10 116546815 116546954 -23769811 + L2 LINE L2 2879 3014 -299 30 0 0 0 chr10 116547010 116547040 -23769725 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 116548420 116548448 -23768317 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 116549139 116549162 -23767603 + AT_rich Low_complexity Low_complexity 1 23 0 281 313 121 0 chr10 116549182 116549348 -23767417 + L1MC/D LINE L1 5656 5841 -1967 189 350 88 7 chr10 116549900 116550037 -23766728 - L2 LINE L2 -6 3307 3160 213 250 0 0 chr10 116550814 116550854 -23765911 + L2 LINE L2 3147 3186 -86 1841 144 7 10 chr10 116551002 116551300 -23765465 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 116552043 116552064 -23764701 + AT_rich Low_complexity Low_complexity 1 21 0 263 271 139 53 chr10 116552111 116552392 -23764373 - L1ME4a LINE L1 -40 6081 5777 547 294 53 24 chr10 116552403 116552573 -23764192 - MIR SINE MIR -13 249 75 2041 123 3 10 chr10 116552754 116553054 -23763711 - AluSx SINE Alu -14 298 1 2388 100 3 0 chr10 116554211 116554522 -23762243 + AluSx SINE Alu 1 312 0 2099 94 17 7 chr10 116555913 116556210 -23760555 - AluSq SINE Alu -13 300 1 1968 119 3 38 chr10 116556507 116556826 -23759939 + AluSq SINE Alu 1 308 -5 312 161 0 18 chr10 116556908 116556964 -23759801 + MER5A DNA MER1_type 47 101 -88 332 264 57 9 chr10 116557289 116557395 -23759370 - MIR SINE MIR -47 215 105 355 287 150 0 chr10 116558224 116558391 -23758374 - MIR SINE MIR -18 244 53 529 224 191 7 chr10 116558408 116558560 -23758205 - MER5A DNA MER1_type 0 189 10 205 266 62 16 chr10 116558940 116559004 -23757761 - MIR SINE MIR -172 90 24 264 330 83 9 chr10 116559009 116559118 -23757647 + Charlie8 DNA MER1_type 2 118 -2299 1363 169 61 15 chr10 116559765 116560026 -23756739 + AluJo SINE Alu 7 279 -33 2673 20 0 0 chr10 116561120 116561425 -23755340 - AluYa5 SINE Alu -6 305 1 22 0 0 0 chr10 116563107 116563129 -23753636 + AT_rich Low_complexity Low_complexity 1 22 0 719 277 113 5 chr10 116563135 116563348 -23753417 + MIR SINE MIR 1 236 -26 1984 48 4 0 chr10 116565198 116565446 -23751319 + L1PA5 LINE L1 5902 6150 -4 632 305 23 0 chr10 116565447 116565621 -23751144 + MIR SINE MIR 29 206 -56 251 348 43 35 chr10 116565958 116566099 -23750666 + MER5B DNA MER1_type 2 143 -35 402 245 0 20 chr10 116566122 116566220 -23750545 - MER5B DNA MER1_type -79 99 4 27 29 0 0 chr10 116566328 116566362 -23750403 + AT_rich Low_complexity Low_complexity 1 34 0 2247 115 0 0 chr10 116569299 116569604 -23747161 - AluY SINE Alu -6 305 1 297 266 75 11 chr10 116569708 116569802 -23746963 + MER94 DNA DNA 34 133 -1 320 194 67 97 chr10 116570484 116570618 -23746147 + MER91B DNA MER1_type 1 130 -60 207 269 75 43 chr10 116570632 116570725 -23746040 + MER91B DNA MER1_type 87 182 -8 2306 92 0 19 chr10 116570945 116571261 -23745504 - AluY SINE Alu -1 310 1 21 0 0 0 chr10 116571478 116571499 -23745266 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 116572130 116572153 -23744612 + AT_rich Low_complexity Low_complexity 1 23 0 585 311 169 19 chr10 116572621 116573141 -23743624 - L2 LINE L2 -609 2705 2108 25 31 0 0 chr10 116573641 116573673 -23743092 + AT_rich Low_complexity Low_complexity 1 32 0 271 59 0 0 chr10 116573801 116573835 -23742930 - tRNA-Cys-TGC tRNA tRNA -40 35 2 21 0 0 0 chr10 116573887 116573908 -23742857 + AT_rich Low_complexity Low_complexity 1 21 0 1608 167 72 10 chr10 116576487 116576670 -23740095 - AluJo SINE Alu -1 311 102 372 94 0 0 chr10 116576670 116576723 -23740042 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1608 167 72 10 chr10 116576723 116576832 -23739933 - AluJo SINE Alu -210 102 1 401 302 128 23 chr10 116576876 116577048 -23739717 - L2 LINE L2 -6 3307 3118 1641 146 66 3 chr10 116577054 116577342 -23739423 + L1MC1 LINE L1 20 325 -6101 374 114 152 0 chr10 116577356 116577435 -23739330 + L1MA9 LINE L1 6179 6269 -43 4411 155 75 55 chr10 116577471 116578464 -23738301 + L1MC1 LINE L1 333 1345 -5081 5475 211 50 7 chr10 116578467 116580370 -23736395 + L1MC1 LINE L1 4098 6087 -537 2295 168 61 2 chr10 116580502 116580991 -23735774 + L1MC1 LINE L1 6096 6613 0 449 270 223 28 chr10 116580992 116581265 -23735500 - L2 LINE L2 -231 3082 2756 265 170 21 0 chr10 116581274 116581321 -23735444 + MIR SINE MIR 64 111 -97 12775 174 51 34 chr10 116581321 116584259 -23732506 - L1 LINE L1 -753 6812 3823 3531 142 28 85 chr10 116584261 116585086 -23731679 - LTR1 LTR ERV1 -7 778 1 1178 158 48 55 chr10 116585098 116585535 -23731230 - L1 LINE L1 -3757 3808 3365 25 51 0 0 chr10 116586172 116586211 -23730554 + AT_rich Low_complexity Low_complexity 1 39 0 1482 236 42 32 chr10 116586227 116586493 -23730272 - L1ME3A LINE L1 -310 5860 5598 2649 82 3 3 chr10 116586493 116586846 -23729919 - THE1A LTR MaLR 0 355 3 11558 88 11 4 chr10 116586848 116588416 -23728349 - THE1A-int LTR MaLR 0 1580 1 2371 94 17 36 chr10 116588416 116588532 -23728233 - THE1A LTR MaLR 0 355 238 2383 66 0 7 chr10 116588532 116588835 -23727930 + AluY SINE Alu 1 301 -10 2371 94 17 36 chr10 116588835 116589080 -23727685 - THE1A LTR MaLR -117 238 1 1482 236 42 32 chr10 116589080 116589212 -23727553 - L1ME3A LINE L1 -571 5599 5454 440 258 62 0 chr10 116590284 116590412 -23726353 + HAL1b LINE L1 488 623 -725 3494 168 51 14 chr10 116590578 116591303 -23725462 + L1MB8 LINE L1 5425 6176 -2 357 246 156 8 chr10 116591581 116591703 -23725062 - MER106A DNA MER1_type -96 140 1 511 192 0 23 chr10 116591803 116591933 -23724832 + (CATATA)n Simple_repeat Simple_repeat 5 131 0 557 319 117 6 chr10 116591962 116592476 -23724289 + L1MC4a LINE L1 4487 5057 -1089 1461 245 102 48 chr10 116592519 116593165 -23723600 + L1MC4a LINE L1 5301 5981 -1827 754 279 26 18 chr10 116593217 116593446 -23723319 + L1M3a LINE L1 210 440 -5515 3794 224 49 63 chr10 116593446 116594852 -23721913 + L1M3a LINE L1 309 1733 -4301 2210 83 59 0 chr10 116594852 116595140 -23721625 + AluY SINE Alu 1 305 -6 3794 224 49 63 chr10 116595140 116595388 -23721377 + L1M3a LINE L1 1733 1983 -4051 2306 140 42 33 chr10 116595388 116595817 -23720948 - Tigger2a DNA MER2_type -1 433 1 3794 224 49 63 chr10 116595817 116597143 -23719622 + L1M3a LINE L1 1983 2851 -3183 1701 186 34 0 chr10 116597143 116597434 -23719331 + AluSx SINE Alu 3 303 -9 3794 224 49 63 chr10 116597434 116597805 -23718960 + L1M3a LINE L1 2851 3226 -2808 43927 39 4 1 chr10 116597806 116603947 -23712818 + L1PA4 LINE L1 1 6154 -1 955 187 28 24 chr10 116603961 116604195 -23712570 + L1M3a LINE L1 3212 3449 -2585 3589 106 10 0 chr10 116604195 116604704 -23712061 + MER75 DNA T2_type 1 514 0 955 187 28 24 chr10 116604704 116604720 -23712045 + L1M3a LINE L1 3449 3463 -2571 1201 98 0 0 chr10 116604721 116604874 -23711891 + AluSg SINE Alu 1 153 -157 367 179 0 0 chr10 116604874 116604941 -23711824 + L1MA9 LINE L1 6245 6311 -1 683 261 38 5 chr10 116605095 116605306 -23711459 - L1MB5 LINE L1 -9 6165 5948 29 0 0 0 chr10 116606447 116606476 -23710289 + AT_rich Low_complexity Low_complexity 1 29 0 250 271 83 0 chr10 116607050 116607146 -23709619 - MIR3 SINE MIR -20 188 85 1533 187 3 7 chr10 116607204 116607488 -23709277 - AluJo SINE Alu -5 307 25 1013 292 23 6 chr10 116608843 116609185 -23707580 + L1MC4 LINE L1 6423 6770 -1272 * 1708 197 6 6 chr10 116609178 116609508 -23707257 + L1M3a LINE L1 3512 3841 -2193 * 2849 249 100 44 chr10 116609507 116610564 -23706201 + L1MC4 LINE L1 6759 7895 -147 285 29 0 0 chr10 116610564 116610598 -23706167 + (TG)n Simple_repeat Simple_repeat 1 34 0 2849 249 100 44 chr10 116610598 116610755 -23706010 + L1MC4 LINE L1 7895 8042 0 1349 255 73 6 chr10 116611192 116611697 -23705068 - L1MEc LINE L1 -2892 3323 2785 4015 183 53 50 chr10 116611704 116612407 -23704358 - L1MB7 LINE L1 -16 6168 5469 705 208 0 0 chr10 116612407 116612527 -23704238 - FLAM_A SINE Alu -12 121 2 4015 183 53 50 chr10 116612527 116613484 -23703281 - L1MB7 LINE L1 -715 5469 4501 1254 245 56 44 chr10 116613487 116613725 -23703040 - L1MEc LINE L1 -3425 2790 2556 1578 213 14 3 chr10 116613725 116614021 -23702744 - AluJb SINE Alu -9 303 5 1254 245 56 44 chr10 116614021 116614173 -23702592 - L1MEc LINE L1 -3659 2556 2407 2151 121 0 22 chr10 116614173 116614488 -23702277 - AluSc SINE Alu -1 308 1 1254 245 56 44 chr10 116614488 116614903 -23701862 - L1MEc LINE L1 -3808 2407 1986 764 148 57 79 chr10 116614906 116615134 -23701631 + L1MA9 LINE L1 5569 5800 -512 7544 118 9 72 chr10 116615134 116616522 -23700243 + HSMAR2 DNA Mariner 1 1301 -1 339 25 0 0 chr10 116616523 116616563 -23700202 + (TG)n Simple_repeat Simple_repeat 1 40 0 764 148 57 79 chr10 116616563 116616697 -23700068 + L1MA9 LINE L1 5800 5935 -377 1789 176 7 7 chr10 116616697 116616992 -23699773 - AluSx SINE Alu -17 295 1 764 148 57 79 chr10 116616992 116617022 -23699743 + L1MA9 LINE L1 5935 5942 -370 1784 189 10 3 chr10 116617022 116617324 -23699441 + AluJo SINE Alu 2 305 -7 764 148 57 79 chr10 116617324 116617366 -23699399 + L1MA9 LINE L1 5942 5983 -329 4442 226 80 10 chr10 116617366 116618425 -23698340 + L1MA5A LINE L1 7 1139 -5650 4023 183 34 39 chr10 116618479 116619666 -23697099 - L1M2 LINE L1 -4712 2077 1009 12784 180 50 35 chr10 116619687 116620272 -23696493 + L1MA5A LINE L1 2242 2817 -4122 2102 127 0 3 chr10 116620272 116620581 -23696184 + AluSx SINE Alu 1 308 0 12784 180 50 35 chr10 116620581 116622083 -23694682 + L1MA5A LINE L1 2817 4295 -2644 1981 149 3 0 chr10 116622083 116622396 -23694369 + AluSx SINE Alu 1 314 0 12784 180 50 35 chr10 116622396 116624620 -23692145 + L1MA5A LINE L1 4295 6589 -350 2175 119 14 0 chr10 116624620 116624914 -23691851 + AluSg SINE Alu 1 298 -12 12784 180 50 35 chr10 116624914 116625269 -23691496 + L1MA5A LINE L1 6589 6937 -2 1890 143 42 6 chr10 116625269 116625612 -23691153 + L1MA9 LINE L1 5942 6312 0 457 283 151 0 chr10 116625613 116625779 -23690986 - L1MDa LINE L1 -4261 2279 2089 1378 174 139 15 chr10 116625801 116626140 -23690625 + MLT1B LTR MaLR 8 388 -2 585 280 73 39 chr10 116626238 116626304 -23690461 - L1MDa LINE L1 -5114 1429 1367 1755 199 63 44 chr10 116626304 116626762 -23690003 + MLT1C LTR MaLR 1 467 0 585 280 73 39 chr10 116626762 116627106 -23689659 - L1MDa LINE L1 -5176 1367 1005 608 162 111 8 chr10 116628091 116628208 -23688557 + FLAM_A SINE Alu 1 129 -4 28 0 0 0 chr10 116628641 116628669 -23688096 + AT_rich Low_complexity Low_complexity 1 28 0 229 248 23 78 chr10 116628742 116628871 -23687894 + MLT1K LTR MaLR 427 548 -40 1720 117 0 0 chr10 116628977 116629208 -23687557 - AluSg/x SINE Alu 0 312 82 597 299 81 9 chr10 116629208 116629422 -23687343 - MIR SINE MIR -17 245 13 294 148 0 0 chr10 116629563 116629617 -23687148 + (TG)n Simple_repeat Simple_repeat 1 54 0 180 77 0 0 chr10 116631127 116631153 -23685612 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 388 301 5 9 chr10 116631189 116631312 -23685453 + MER5A DNA MER1_type 13 147 -42 489 263 113 16 chr10 116631803 116631997 -23684768 + MIR SINE MIR 50 262 0 226 362 67 13 chr10 116632320 116632469 -23684296 + MER5B DNA MER1_type 21 177 -1 23 33 0 0 chr10 116635456 116635486 -23681279 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr10 116636153 116636178 -23680587 + GC_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr10 116636627 116636664 -23680101 + GC_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr10 116636924 116636962 -23679803 + GC_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 116637098 116637120 -23679645 + GC_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr10 116638935 116638978 -23677787 + AT_rich Low_complexity Low_complexity 1 43 0 815 285 41 21 chr10 116638987 116639229 -23677536 - MIR SINE MIR 0 262 16 389 246 47 33 chr10 116639689 116639827 -23676938 - MIR3 SINE MIR -25 183 39 539 292 49 7 chr10 116642203 116642347 -23674418 + MIR3 SINE MIR 20 169 -39 418 291 14 7 chr10 116642479 116642620 -23674145 + MER103 DNA DNA 25 166 0 209 206 0 15 chr10 116642912 116642980 -23673785 + (TG)n Simple_repeat Simple_repeat 2 68 0 416 244 58 13 chr10 116643426 116643582 -23673183 - LTR33 LTR ERVL -24 497 335 227 256 51 109 chr10 116644535 116644672 -23672093 - L2 LINE L2 -1 3312 3184 384 250 131 25 chr10 116645092 116645252 -23671513 - L2 LINE L2 -497 2817 2641 1782 38 0 0 chr10 116645997 116646207 -23670558 - L1PA5 LINE L1 -6 6148 5939 388 277 112 45 chr10 116646303 116646570 -23670195 + LTR33 LTR ERVL 1 285 -236 200 324 114 37 chr10 116646682 116646810 -23669955 + MIR SINE MIR 18 152 -56 2117 154 3 0 chr10 116647664 116647975 -23668790 + AluSx SINE Alu 1 312 0 408 286 96 28 chr10 116648081 116648259 -23668506 + MIR SINE MIR 8 197 -65 332 310 110 0 chr10 116648521 116648676 -23668089 + MIR SINE MIR 91 262 0 256 350 62 0 chr10 116648681 116648761 -23668004 - L2 LINE L2 -19 3253 3169 318 259 215 9 chr10 116648805 116649149 -23667616 + L1ME4a LINE L1 5707 6121 0 415 353 74 25 chr10 116649707 116649951 -23666814 + L1ME LINE L1 5511 5766 -355 248 284 135 0 chr10 116650187 116650261 -23666504 + L2 LINE L2 3230 3313 0 2079 195 47 75 chr10 116650711 116651281 -23665484 - MLT2B3 LTR ERVL 0 554 1 198 0 0 0 chr10 116652178 116652200 -23664565 + (ATG)n Simple_repeat Simple_repeat 2 23 0 612 269 9 47 chr10 116652932 116653144 -23663621 + MLT1K LTR MaLR 385 588 0 189 313 0 0 chr10 116653981 116654029 -23662736 + MIR SINE MIR 8 55 -207 220 324 52 75 chr10 116654208 116654381 -23662384 + L2 LINE L2 3094 3262 -10 465 19 0 0 chr10 116655117 116655171 -23661594 + (TG)n Simple_repeat Simple_repeat 1 54 0 219 146 0 0 chr10 116655171 116655212 -23661553 + (GA)n Simple_repeat Simple_repeat 2 42 0 193 360 12 0 chr10 116655508 116655594 -23661171 + MIR SINE MIR 61 147 -115 25 0 0 0 chr10 116656008 116656033 -23660732 + AT_rich Low_complexity Low_complexity 1 25 0 640 221 0 0 chr10 116656835 116656948 -23659817 - MER81 DNA DNA 0 114 2 196 286 0 71 chr10 116657009 116657093 -23659672 - MIR SINE MIR -102 106 29 560 251 102 32 chr10 116657605 116657793 -23658972 - MIR SINE MIR -3 259 61 236 280 226 32 chr10 116657844 116658030 -23658735 + L2 LINE L2 3092 3313 0 420 238 83 18 chr10 116659379 116659570 -23657195 + MIR SINE MIR 35 243 -19 200 256 128 26 chr10 116659778 116659856 -23656909 + MIR SINE MIR 65 150 -112 407 299 60 8 chr10 116660935 116661069 -23655696 - MIR SINE MIR -19 243 103 569 305 11 0 chr10 116662163 116662337 -23654428 + MER117 DNA MER1_type 6 181 -16 2277 100 0 0 chr10 116662512 116662802 -23653963 - AluSc SINE Alu -19 290 1 184 316 61 44 chr10 116663683 116663797 -23652968 + L2 LINE L2 3017 3132 -181 222 298 165 8 chr10 116663828 116663949 -23652816 + L2 LINE L2 3132 3271 -1 2097 107 84 28 chr10 116664669 116665024 -23651741 + THE1C LTR MaLR 1 375 0 399 207 12 0 chr10 116665542 116665624 -23651141 - MER33 DNA MER1_type -237 87 5 485 231 210 7 chr10 116665637 116665780 -23650985 + MIR SINE MIR 90 261 -1 288 242 212 38 chr10 116666570 116666702 -23650063 - L2 LINE L2 -1 3312 3158 276 244 12 37 chr10 116666748 116666830 -23649935 - MER5B DNA MER1_type -85 93 14 218 254 0 0 chr10 116666837 116666892 -23649873 + G-rich Low_complexity Low_complexity 6 60 0 1550 183 50 30 chr10 116667071 116667372 -23649393 - AluJo SINE Alu -5 307 1 249 33 0 0 chr10 116667417 116667447 -23649318 + (T)n Simple_repeat Simple_repeat 1 30 0 21 36 0 0 chr10 116667563 116667591 -23649174 + AT_rich Low_complexity Low_complexity 1 28 0 2132 243 107 55 chr10 116667756 116668326 -23648439 - L1MC4a LINE L1 -747 5399 4860 494 108 60 0 chr10 116668326 116668409 -23648356 - L1PA13 LINE L1 0 6163 6076 2132 243 107 55 chr10 116668409 116668548 -23648217 - L1MC4a LINE L1 -1286 4860 5115 1461 172 15 55 chr10 116668548 116668873 -23647892 - AluJo SINE Alu 0 312 1 2132 243 107 55 chr10 116668873 116669387 -23647378 - L1MC4a LINE L1 -1030 5116 4630 385 325 67 0 chr10 116669431 116669551 -23647214 + MIR SINE MIR 5 132 -130 459 242 48 63 chr10 116670791 116670959 -23645806 - MIR3 SINE MIR -51 157 3 306 280 15 83 chr10 116671091 116671223 -23645542 + MIR SINE MIR 30 152 -56 436 265 20 26 chr10 116671306 116671457 -23645308 - MLT1K LTR MaLR -27 561 412 266 300 172 4 chr10 116672225 116672452 -23644313 + L2 LINE L2 2881 3145 -168 242 118 0 0 chr10 116673201 116673235 -23643530 - MIR SINE MIR -113 149 116 878 197 11 11 chr10 116674017 116674200 -23642565 - MER53 DNA DNA 0 189 7 467 277 36 42 chr10 116675636 116675802 -23640963 - MIR SINE MIR -8 254 90 190 326 81 46 chr10 116676412 116676673 -23640092 - L3 LINE CR1 -144 1433 1164 559 239 138 28 chr10 116676816 116677034 -23639731 - MIR SINE MIR -14 248 7 284 250 28 19 chr10 116677034 116677142 -23639623 + MER5A DNA MER1_type 9 117 -72 1548 151 25 88 chr10 116677349 116677668 -23639097 + MLT2D LTR ERVL 1 299 -115 387 0 0 0 chr10 116677677 116677720 -23639045 + (TC)n Simple_repeat Simple_repeat 1 43 0 567 274 43 62 chr10 116678181 116678602 -23638163 - L1MEc LINE L1 -4880 1400 1040 344 385 47 24 chr10 116678842 116679055 -23637710 - L1MEc LINE L1 -6000 563 346 1405 180 78 28 chr10 116679204 116679488 -23637277 - AluJb SINE Alu -14 298 1 497 326 75 18 chr10 116679536 116679763 -23637002 - MIR SINE MIR -22 240 1 375 290 94 0 chr10 116680030 116680168 -23636597 - MIR3 SINE MIR -25 183 33 1882 250 76 6 chr10 116680171 116680655 -23636110 - LTR33 LTR ERVL -2 519 2 530 258 145 6 chr10 116681533 116681692 -23635073 - MIR SINE MIR -34 228 48 449 296 31 37 chr10 116682289 116682451 -23634314 - MIR SINE MIR -15 247 87 723 282 110 52 chr10 116683325 116683807 -23632958 + L2 LINE L2 2804 3313 0 2258 108 0 0 chr10 116683930 116684235 -23632530 - AluSc SINE Alu -4 305 1 1280 251 58 28 chr10 116684269 116684663 -23632102 + MLT1I LTR MaLR 2 407 -2 453 246 82 0 chr10 116684796 116684918 -23631847 - MIR SINE MIR -28 234 103 656 242 146 0 chr10 116684919 116685084 -23631681 + MER5A DNA MER1_type 1 189 0 278 224 0 17 chr10 116686071 116686129 -23630636 - L2 LINE L2 -2 3270 3214 195 309 25 0 chr10 116686597 116686678 -23630087 - MIR SINE MIR -101 107 25 639 272 120 5 chr10 116687224 116687415 -23629350 + MIR SINE MIR 37 249 -13 317 115 0 73 chr10 116687491 116687587 -23629178 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 291 317 112 0 chr10 116688443 116688559 -23628206 + MIR SINE MIR 100 227 -35 22 0 0 0 chr10 116689980 116690002 -23626763 + AT_rich Low_complexity Low_complexity 1 22 0 8778 224 60 14 chr10 116690002 116693505 -23623260 - L1PA16 LINE L1 -196 6673 2747 617 168 0 18 chr10 116693504 116693617 -23623148 - L1M3 LINE L1 -607 5564 5454 * 22 56 0 0 chr10 116693617 116693653 -23623112 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr10 116693729 116693764 -23623001 + AT_rich Low_complexity Low_complexity 1 35 0 1613 196 21 3 chr10 116694342 116694668 -23622097 - MER44D DNA MER2_type -6 603 2 579 244 30 2 chr10 116694672 116694832 -23621933 - MIR SINE MIR -55 207 37 199 274 113 73 chr10 116695417 116695541 -23621224 - L2 LINE L2 -7 3265 3137 611 288 15 3 chr10 116696230 116696406 -23620359 - MIR SINE MIR -23 185 3 428 301 98 34 chr10 116697867 116698103 -23618662 + L3 LINE CR1 661 911 -666 652 287 68 58 chr10 116698167 116698391 -23618374 - L1ME4a LINE L1 -12 6109 5889 1731 144 28 14 chr10 116698391 116698682 -23618083 - AluJb SINE Alu -17 295 1 652 287 68 58 chr10 116698682 116699234 -23617531 - L1ME4a LINE L1 -232 5889 5325 407 276 157 22 chr10 116699244 116699512 -23617253 - L1ME4a LINE L1 -838 5308 5005 259 346 61 35 chr10 116699559 116699790 -23616975 + L3 LINE CR1 1338 1574 -3 207 262 0 33 chr10 116700345 116700406 -23616359 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 516 311 105 14 chr10 116701042 116701251 -23615514 + MIR SINE MIR 7 234 -28 24 0 0 0 chr10 116701647 116701671 -23615094 + AT_rich Low_complexity Low_complexity 1 24 0 243 288 137 27 chr10 116701950 116702096 -23614669 + MIR SINE MIR 60 221 -41 249 293 57 28 chr10 116703041 116703147 -23613618 - MIR SINE MIR 0 262 154 1304 244 71 60 chr10 116703202 116703653 -23613112 - MLT1K LTR MaLR -72 516 61 379 265 58 10 chr10 116703694 116703815 -23612950 - MIR SINE MIR -65 143 34 1012 249 47 61 chr10 116704497 116704923 -23611842 - MER113 DNA MER1_type? -12 509 90 1508 196 29 61 chr10 116704938 116705346 -23611419 - MLT2C1 LTR ERVL -2 395 1 262 247 134 10 chr10 116706574 116706671 -23610094 + MER117 DNA MER1_type 8 116 -81 188 233 47 0 chr10 116706819 116706862 -23609903 + L2 LINE L2 3180 3224 -89 497 285 53 87 chr10 116707078 116707457 -23609308 - MLT1J LTR MaLR -53 458 53 296 301 60 8 chr10 116707706 116707839 -23608926 + MER117 DNA MER1_type 8 147 -50 188 268 71 0 chr10 116707952 116708008 -23608757 + L2 LINE L2 3181 3240 -73 423 277 68 82 chr10 116708161 116708453 -23608312 - MLT1L LTR MaLR 0 607 224 1547 294 12 5 chr10 116708687 116709115 -23607650 + LTR16B LTR ERVL 32 462 -2 205 205 0 0 chr10 116709289 116709328 -23607437 + T-rich Low_complexity Low_complexity 1 39 0 321 239 86 51 chr10 116709333 116709450 -23607315 - L2 LINE L2 -6 3266 3146 240 288 0 0 chr10 116710192 116710258 -23606507 + L2 LINE L2 2990 3055 -258 28 0 0 0 chr10 116710964 116710992 -23605773 + AT_rich Low_complexity Low_complexity 1 28 0 7092 66 3 2 chr10 116711002 116712640 -23604125 - L1PA8 LINE L1 -2 6170 4534 300 333 203 11 chr10 116714262 116714631 -23602134 + L2 LINE L2 2322 2761 -553 334 209 103 70 chr10 116714807 116714916 -23601849 - MER5A DNA MER1_type -76 112 11 253 336 67 109 chr10 116715925 116716208 -23600557 - L2 LINE L2 -6 3266 2996 350 344 133 3 chr10 116716393 116716695 -23600070 - L2 LINE L2 -663 2651 2311 234 0 0 0 chr10 116717501 116717527 -23599238 + (TC)n Simple_repeat Simple_repeat 1 26 0 180 300 33 100 chr10 116717589 116717739 -23599026 + MIR SINE MIR 77 216 -46 236 272 52 15 chr10 116718340 116718476 -23598289 + L1MC/D LINE L1 5631 5771 -2037 2622 259 97 15 chr10 116719136 116720705 -23596060 - L1ME3A LINE L1 -35 6204 4488 3285 194 70 153 chr10 116720835 116721403 -23595362 - L1MC4a LINE L1 -1 7807 7193 478 248 25 0 chr10 116721403 116721524 -23595241 - MLT1F1 LTR MaLR -442 125 2 3285 194 70 153 chr10 116721524 116721732 -23595033 - L1MC4a LINE L1 -615 7193 6969 1965 130 0 7 chr10 116721732 116722045 -23594720 + AluY SINE Alu 1 311 0 3285 194 70 153 chr10 116722045 116722060 -23594705 - L1MC4a LINE L1 -839 6969 6954 183 80 0 0 chr10 116722060 116722085 -23594680 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 3285 194 70 153 chr10 116722085 116722909 -23593856 - L1MC4a LINE L1 -854 6954 6214 43 20 0 0 chr10 116723581 116723631 -23593134 + AT_rich Low_complexity Low_complexity 1 50 0 892 193 84 17 chr10 116723709 116724005 -23592760 - L1ME3A LINE L1 -2923 3292 2977 6462 63 49 0 chr10 116724006 116725217 -23591548 - L1PA7 LINE L1 -4 6150 4909 1671 72 19 30 chr10 116725217 116725480 -23591285 - L1PA7 LINE L1 -1650 4496 4237 3079 101 21 2 chr10 116725482 116725949 -23590816 + L1PA7 LINE L1 3759 4234 -1912 1913 263 91 31 chr10 116725970 116727761 -23589004 - L1MEc LINE L1 -3276 2939 1042 2040 165 7 77 chr10 116727761 116728203 -23588562 + MLT2D LTR ERVL 4 414 0 1913 263 91 31 chr10 116728203 116728441 -23588324 - L1MEc LINE L1 -5173 1042 820 342 169 52 0 chr10 116728446 116728523 -23588242 - L1PA15 LINE L1 -4 6161 6081 4214 169 2 13 chr10 116728523 116729609 -23587156 - L1P4 LINE L1 -633 5528 4457 2632 247 38 4 chr10 116729610 116730355 -23586410 - L1P4 LINE L1 -3271 2875 2106 841 308 52 51 chr10 116730356 116730434 -23586331 - L1MEc LINE L1 -5572 824 748 1716 184 59 21 chr10 116730434 116730809 -23585956 - MLT1B LTR MaLR -1 389 1 841 308 52 51 chr10 116730809 116731481 -23585284 - L1MEc LINE L1 -5648 748 73 281 370 37 25 chr10 116731903 116732146 -23584619 + MIR SINE MIR 13 258 -4 294 167 0 0 chr10 116733042 116733090 -23583675 - MER91A DNA MER1_type -148 48 1 247 196 54 0 chr10 116733160 116733216 -23583549 + CT-rich Low_complexity Low_complexity 3 61 0 437 305 23 0 chr10 116733218 116733349 -23583416 - MIR SINE MIR -3 259 126 3465 15 0 0 chr10 116734866 116735304 -23581461 + L1P1 LINE L1 5235 5672 -483 421 123 0 25 chr10 116735711 116735792 -23580973 + (TTCC)n Simple_repeat Simple_repeat 1 79 0 1943 144 0 0 chr10 116735805 116736090 -23580675 - AluSc SINE Alu -2 307 23 2636 108 11 0 chr10 116736276 116736647 -23580118 + THE1C LTR MaLR 1 375 0 246 95 0 0 chr10 116738387 116738429 -23578336 + (T)n Simple_repeat Simple_repeat 1 42 0 2641 171 42 45 chr10 116739315 116739842 -23576923 - MER45R DNA AcHobo 0 1581 1055 1785 171 3 27 chr10 116739842 116740140 -23576625 + AluSx SINE Alu 3 293 -19 2641 171 42 45 chr10 116740140 116740353 -23576412 - MER45R DNA AcHobo -526 1055 843 405 123 0 55 chr10 116740353 116740426 -23576339 + Tigger2 DNA MER2_type 1 69 -2649 * 2002 124 84 93 chr10 116740416 116740623 -23576142 + Tigger2 DNA MER2_type 2273 2480 -238 2133 113 0 20 chr10 116740623 116740925 -23575840 - AluSg SINE Alu -14 296 1 2002 124 84 93 chr10 116740925 116741167 -23575598 + Tigger2 DNA MER2_type 2480 2718 0 2646 216 77 48 chr10 116741169 116741220 -23575545 - MER45R DNA AcHobo -739 842 794 2547 52 0 13 chr10 116741220 116741528 -23575237 - AluY SINE Alu -7 304 1 2646 216 77 48 chr10 116741528 116742292 -23574473 - MER45R DNA AcHobo -787 794 3 186 299 0 52 chr10 116742306 116742403 -23574362 - L3 LINE CR1 -120 1457 1366 23 33 0 0 chr10 116742434 116742464 -23574301 + AT_rich Low_complexity Low_complexity 1 30 0 198 316 0 18 chr10 116742580 116742637 -23574128 - L3b LINE CR1 0 1583 1528 373 230 47 74 chr10 116742658 116742806 -23573959 - MER5A DNA MER1_type -25 164 21 462 310 92 33 chr10 116743371 116743642 -23573123 - MLT1I LTR MaLR -22 387 101 548 256 16 0 chr10 116744540 116744665 -23572100 + MIR SINE MIR 49 175 -87 2576 254 69 34 chr10 116745293 116747802 -23568963 - L1ME1 LINE L1 -5 6956 4537 1816 141 20 30 chr10 116747802 116748106 -23568659 + AluJb SINE Alu 1 301 -11 2576 254 69 34 chr10 116748106 116751351 -23565414 - L1ME1 LINE L1 -2424 4537 778 2369 72 0 22 chr10 116751440 116751758 -23565007 - AluY SINE Alu 0 311 1 1454 271 11 14 chr10 116751830 116752276 -23564489 - L1ME1 LINE L1 -5960 463 19 363 331 21 28 chr10 116752731 116752873 -23563892 + MIR3 SINE MIR 30 170 -38 328 271 47 0 chr10 116753043 116753128 -23563637 + L1MC4 LINE L1 6614 6702 -1340 543 141 0 0 chr10 116753128 116753220 -23563545 + (CA)n Simple_repeat Simple_repeat 1 92 0 346 86 13 0 chr10 116753355 116753414 -23563351 + AluSc SINE Alu 247 296 -3 1959 149 0 7 chr10 116753462 116753758 -23563007 - AluSx SINE Alu -18 294 1 1881 147 0 0 chr10 116754775 116755040 -23561725 + AluSx SINE Alu 35 299 -13 573 222 56 14 chr10 116755879 116756023 -23560742 + MIR SINE MIR 35 184 -78 234 300 0 0 chr10 116756038 116756108 -23560657 + CT-rich Low_complexity Low_complexity 2 71 0 257 189 54 0 chr10 116757094 116757168 -23559597 + (TA)n Simple_repeat Simple_repeat 1 78 0 207 379 0 0 chr10 116757477 116757543 -23559222 - L2 LINE L2 -1 3271 3206 468 310 122 14 chr10 116757639 116757852 -23558913 - MIR SINE MIR 0 262 27 228 326 12 35 chr10 116757886 116757972 -23558793 + MIR SINE MIR 105 188 -74 1643 182 102 10 chr10 116758209 116758593 -23558172 + MSTB1 LTR MaLR 1 419 -13 260 302 79 16 chr10 116758602 116758728 -23558037 + MIR SINE MIR 86 219 -43 317 293 62 65 chr10 116760155 116760496 -23556269 + L2 LINE L2 2932 3271 -1 261 299 0 65 chr10 116760512 116760619 -23556146 + MIR SINE MIR 19 118 -90 568 246 0 0 chr10 116761575 116761697 -23555068 - MIR3 SINE MIR -54 154 33 449 266 133 18 chr10 116761727 116762005 -23554760 - LTR33 LTR ERVL -5 516 207 1684 158 40 7 chr10 116763442 116763715 -23553050 + AluJb SINE Alu 1 282 -30 332 277 21 11 chr10 116763815 116763909 -23552856 - L2 LINE L2 -2 3311 3217 503 273 25 19 chr10 116764668 116764829 -23551936 + MIR SINE MIR 7 168 -94 731 243 66 52 chr10 116764836 116765198 -23551567 + L1MC3 LINE L1 6047 6413 -1372 412 289 47 78 chr10 116765303 116765559 -23551206 - L1MEd LINE L1 -5010 1109 862 2927 241 91 17 chr10 116765641 116768319 -23548446 - L1MD3 LINE L1 -10 8265 5096 2358 92 0 3 chr10 116768319 116768622 -23548143 - AluSg SINE Alu -5 305 4 2927 241 91 17 chr10 116768622 116769493 -23547272 - L1MD3 LINE L1 -3179 5096 4290 2073 292 81 34 chr10 116769485 116771180 -23545585 - L1MD3 LINE L1 -2846 3580 1850 * 3021 184 65 14 chr10 116771179 116771838 -23544927 - L1MB1 LINE L1 0 6168 5476 308 256 26 70 chr10 116771844 116772000 -23544765 - L1MD3 LINE L1 -6272 154 6 333 274 23 69 chr10 116772573 116772748 -23544017 - L1MEd LINE L1 -5941 178 12 209 222 37 19 chr10 116772960 116773014 -23543751 - MIR SINE MIR -150 112 58 241 192 14 68 chr10 116774006 116774079 -23542686 - LTR33A LTR ERVL -16 507 439 445 241 64 28 chr10 116774802 116774943 -23541822 - MIR SINE MIR -111 151 6 270 336 138 39 chr10 116775004 116775656 -23541109 + L2 LINE L2 2543 3272 0 1004 255 44 38 chr10 116776784 116776878 -23539887 - LTR16C LTR ERVL -3 488 396 2213 138 37 11 chr10 116776878 116777233 -23539532 + THE1B LTR MaLR 1 364 0 1004 255 44 38 chr10 116777233 116777479 -23539286 - LTR16C LTR ERVL -95 396 146 292 194 382 0 chr10 116778235 116778379 -23538386 - MIR SINE MIR -59 203 5 325 305 0 0 chr10 116779188 116779270 -23537495 + MER5B DNA MER1_type 96 177 -1 1363 150 51 80 chr10 116779577 116779851 -23536914 - MSTB LTR MaLR 0 426 161 782 332 67 24 chr10 116780510 116780974 -23535791 - MLT1K LTR MaLR -27 561 78 217 305 213 0 chr10 116781739 116781880 -23534885 - L2 LINE L2 -208 3064 2894 7858 33 1 2 chr10 116781965 116783386 -23533379 + L1PA4 LINE L1 4748 6168 0 280 0 0 0 chr10 116783355 116783407 -23533358 + (TAA)n Simple_repeat Simple_repeat 3 54 0 181 299 186 10 chr10 116783790 116783887 -23532878 - L2 LINE L2 -9 3263 3150 344 289 151 0 chr10 116783932 116784091 -23532674 + MIR SINE MIR 78 260 -2 354 275 371 6 chr10 116784466 116784644 -23532121 - MIR SINE MIR -5 257 15 625 293 114 22 chr10 116784966 116785239 -23531526 - L3 LINE CR1 -11 1566 1269 1245 338 107 33 chr10 116785377 116786514 -23530251 + L2 LINE L2 1551 2771 -543 184 300 50 30 chr10 116787223 116787323 -23529442 - MER5B DNA MER1_type 0 178 77 275 339 85 18 chr10 116788685 116788850 -23527915 + MIR SINE MIR 16 191 -71 552 335 36 18 chr10 116789000 116789224 -23527541 + MIR SINE MIR 15 242 -20 4531 130 6 0 chr10 116789451 116790103 -23526662 - L1PA16 LINE L1 -2 6164 5509 195 184 0 0 chr10 116790686 116790724 -23526041 + C-rich Low_complexity Low_complexity 1 38 0 449 246 70 0 chr10 116790782 116790896 -23525869 - AluSc SINE Alu -182 127 6 619 291 65 17 chr10 116790953 116791183 -23525582 + MIR SINE MIR 5 245 -17 251 289 83 25 chr10 116791255 116791376 -23525389 - L1MC/D LINE L1 -421 5821 5694 2022 178 54 11 chr10 116792089 116792460 -23524305 - MLT1B LTR MaLR 0 390 4 275 91 136 0 chr10 116792783 116792827 -23523938 - MADE1 DNA Mariner 0 80 31 1009 122 0 7 chr10 116792827 116792966 -23523799 + AluSc SINE Alu 44 181 -128 547 217 117 8 chr10 116793075 116793195 -23523570 - AluJo SINE Alu -178 134 2 2032 178 58 6 chr10 116793229 116793594 -23523171 + MLT1B LTR MaLR 5 388 -2 332 199 184 59 chr10 116793948 116794084 -23522681 + MIR SINE MIR 67 219 -43 985 156 0 48 chr10 116794462 116794629 -23522136 - AluJb SINE Alu -24 288 130 5927 95 35 2 chr10 116794642 116795482 -23521283 - L1PA11 LINE L1 -3 6171 5305 689 257 21 27 chr10 116797660 116797847 -23518918 + AluJb SINE Alu 1 186 -126 639 162 45 0 chr10 116898605 116898716 -23418049 - FLAM_A SINE Alu -4 138 23 346 294 39 19 chr10 116900429 116900557 -23416208 + MER5A DNA MER1_type 9 125 -53 295 259 84 49 chr10 116901541 116901684 -23415081 + L2 LINE L2 2995 3142 -171 1300 236 134 22 chr10 116901703 116902068 -23414697 + MLT1F LTR MaLR 27 432 -110 611 227 61 25 chr10 116902068 116902231 -23414534 + L2 LINE L2 3140 3308 -5 265 174 0 0 chr10 116902886 116902932 -23413833 + MER5B DNA MER1_type 1 46 -132 1504 225 233 8 chr10 116902934 116903445 -23413320 + LTR50 LTR ERVL 3 628 -167 230 315 90 18 chr10 116903518 116903629 -23413136 - MER5B DNA MER1_type -40 138 20 376 298 19 88 chr10 116905293 116905462 -23411303 + MIR SINE MIR 32 180 -82 453 214 18 45 chr10 116905462 116905574 -23411191 + MER81 DNA DNA 3 111 -3 376 298 19 88 chr10 116905574 116905651 -23411114 + MIR SINE MIR 180 261 -1 865 168 0 0 chr10 116907169 116907306 -23409459 - FLAM_C SINE Alu -6 137 1 290 355 54 42 chr10 116907640 116907806 -23408959 + MIR SINE MIR 15 182 -80 400 274 27 75 chr10 116908143 116908329 -23408436 - MIR SINE MIR -24 238 62 1779 167 0 41 chr10 116908445 116908762 -23408003 - AluJo SINE Alu -8 304 1 328 306 35 35 chr10 116909856 116910111 -23406654 - L1ME4a LINE L1 -190 5931 5677 476 278 0 17 chr10 116911427 116911542 -23405223 - L2 LINE L2 -20 3293 3181 830 151 0 40 chr10 116911570 116911609 -23405156 + AluJb SINE Alu 2 41 -271 5220 88 8 3 chr10 116911609 116912266 -23404499 - PABL_A LTR ERV1 0 660 1 830 151 0 40 chr10 116912266 116912352 -23404413 + AluJb SINE Alu 41 122 -190 188 33 0 33 chr10 116912353 116912383 -23404382 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 999 180 21 21 chr10 116912441 116912630 -23404135 + MER53 DNA DNA 1 189 0 899 213 144 0 chr10 116912765 116912967 -23403798 - MIR SINE MIR -21 241 11 313 351 97 0 chr10 116913727 116913861 -23402904 - MIR SINE MIR -96 166 20 35 24 0 0 chr10 116914665 116914707 -23402058 + AT_rich Low_complexity Low_complexity 1 42 0 219 390 9 0 chr10 116914902 116915007 -23401758 - MIR SINE MIR -73 135 30 471 291 167 33 chr10 116915736 116916289 -23400476 - L2 LINE L2 -1 3312 2601 2220 132 89 3 chr10 116916468 116916795 -23399970 - LTR18A LTR ERVL 0 357 3 478 287 52 17 chr10 116918531 116918705 -23398060 - MIR SINE MIR -51 211 32 464 213 144 32 chr10 116919257 116919422 -23397343 + MER5A DNA MER1_type 4 189 0 1445 204 18 11 chr10 116919683 116919963 -23396802 - AluJo SINE Alu -30 282 1 602 313 9 37 chr10 116919993 116920207 -23396558 + MIR SINE MIR 49 256 -6 227 228 61 61 chr10 116920390 116920504 -23396261 - MIR SINE MIR -73 189 76 824 254 84 42 chr10 116920763 116921192 -23395573 + MER113 DNA MER1_type? 2 448 -73 804 250 23 39 chr10 116921321 116921581 -23395184 + MIR SINE MIR 4 259 -3 225 0 0 0 chr10 116921583 116921608 -23395157 + (CTG)n Simple_repeat Simple_repeat 1 25 0 880 233 117 50 chr10 116921885 116922187 -23394578 + MLT1I LTR MaLR 8 341 -68 1943 110 92 0 chr10 116922187 116922468 -23394297 - AluSq SINE Alu -5 308 2 880 233 117 50 chr10 116922468 116922542 -23394223 + MLT1I LTR MaLR 341 409 0 3128 65 9 12 chr10 116922602 116923033 -23393732 - L1MA1 LINE L1 0 6302 5873 1709 181 37 37 chr10 116923034 116923409 -23393356 + THE1C LTR MaLR 1 375 0 9298 143 21 30 chr10 116923411 116925002 -23391763 + THE1C-int LTR MaLR 3 1580 0 928 142 0 19 chr10 116925002 116925157 -23391608 + THE1C LTR MaLR 1 152 -223 2822 158 32 6 chr10 116925163 116925700 -23391065 - L1 LINE L1 -1810 5755 5205 18512 166 40 11 chr10 116925708 116930048 -23386717 - L1 LINE L1 -3083 4482 13 198 306 20 0 chr10 116930395 116930444 -23386321 - L3 LINE CR1 -106 1471 1422 513 292 0 0 chr10 116930556 116930686 -23386079 + MER94 DNA DNA 1 130 -4 3555 179 39 39 chr10 116932320 116933143 -23383622 + L1MC2 LINE L1 5483 7770 -15 401 254 30 25 chr10 116933177 116933374 -23383391 + L1ME3A LINE L1 2512 2709 -3437 2640 272 122 38 chr10 116934292 116936461 -23380304 + L1ME3A LINE L1 2815 5165 -981 1036 292 67 19 chr10 116936574 116936778 -23379987 + L1ME3A LINE L1 5386 5579 -591 963 213 154 18 chr10 116936778 116936947 -23379818 - MLT1B LTR MaLR 0 390 246 198 0 0 0 chr10 116936947 116936969 -23379796 + (GA)n Simple_repeat Simple_repeat 1 22 0 963 213 154 18 chr10 116936969 116937142 -23379623 - MLT1B LTR MaLR -144 246 1 1036 292 67 19 chr10 116937142 116937502 -23379263 + L1ME3A LINE L1 5579 5977 -193 348 259 85 65 chr10 116937504 116937537 -23379228 - L1MEc LINE L1 -4813 1583 1552 2239 84 7 14 chr10 116937537 116937834 -23378931 + AluY SINE Alu 1 295 -16 348 259 85 65 chr10 116937834 116938001 -23378764 - L1MEc LINE L1 -4844 1552 1379 2078 209 41 2 chr10 116938253 116938688 -23378077 - MER82 DNA MER2_type 0 653 202 475 253 12 59 chr10 116939135 116939305 -23377460 - MER82 DNA MER2_type -491 162 1 1437 131 0 9 chr10 116939987 116940216 -23376549 - MLT1B LTR MaLR 0 390 164 628 181 0 36 chr10 116940236 116940374 -23376391 - FLAM_A SINE Alu 0 142 10 983 169 27 6 chr10 116940376 116940559 -23376206 - MLT1B LTR MaLR -203 187 1 * 1302 199 107 117 chr10 116940552 116941251 -23375514 - MER50 LTR ERV1 0 734 43 5631 109 21 23 chr10 116941391 116942265 -23374500 - MER4D LTR ERV1 0 872 1 301 276 48 19 chr10 116942745 116942850 -23373915 + L1ME3A LINE L1 6054 6161 -9 192 97 0 0 chr10 116944113 116944144 -23372621 + (CA)n Simple_repeat Simple_repeat 2 32 0 236 276 26 0 chr10 116944250 116944334 -23372431 - MIR SINE MIR -70 138 48 350 310 135 23 chr10 116944437 116944657 -23372108 + MIR3 SINE MIR 15 256 -6 436 337 21 32 chr10 116945164 116945354 -23371411 - MIR SINE MIR -55 207 20 297 51 0 0 chr10 116945396 116945435 -23371330 + (CA)n Simple_repeat Simple_repeat 1 39 0 375 344 32 0 chr10 116945648 116945805 -23370960 + MIR3 SINE MIR 40 201 -7 35 24 0 0 chr10 116946056 116946098 -23370667 + AT_rich Low_complexity Low_complexity 1 42 0 222 255 20 0 chr10 116946933 116946984 -23369781 - MER91A DNA MER1_type -144 52 1 218 277 19 6 chr10 116947330 116947489 -23369276 + GA-rich Low_complexity Low_complexity 2 162 0 237 282 141 47 chr10 116948052 116948201 -23368564 + MER5A DNA MER1_type 9 171 -18 239 288 12 12 chr10 116948088 116948168 -23368597 - MER5B DNA MER1_type -35 143 64 192 298 24 87 chr10 116948763 116948971 -23367794 + MIR SINE MIR 22 216 -46 2096 188 98 12 chr10 116949014 116949513 -23367252 + MER34 LTR ERV1 1 542 0 180 0 0 0 chr10 116949590 116949610 -23367155 + (TTCC)n Simple_repeat Simple_repeat 4 23 0 321 241 165 61 chr10 116949995 116950256 -23366509 + L2 LINE L2 2847 3134 -179 547 222 99 37 chr10 116950260 116950422 -23366343 - MER5B DNA MER1_type 0 178 7 485 205 86 32 chr10 116950480 116950654 -23366111 + MLT1H LTR MaLR 12 161 -388 639 245 36 109 chr10 116950655 116950957 -23365808 + MLT1H LTR MaLR 270 549 0 305 228 0 172 chr10 116950957 116951102 -23365663 + L2 LINE L2 3194 3313 0 694 241 37 5 chr10 116951768 116951959 -23364806 - LTR16C LTR ERVL -62 429 233 415 329 111 0 chr10 116952359 116952566 -23364199 - MIR SINE MIR -21 241 12 1838 157 31 0 chr10 116952681 116952974 -23363791 - AluJb SINE Alu -10 302 1 301 191 184 21 chr10 116952985 116953126 -23363639 + MIR SINE MIR 88 251 -11 187 316 70 44 chr10 116953285 116953399 -23363366 + L2 LINE L2 3150 3266 -6 431 299 134 11 chr10 116953681 116953868 -23362897 - MIR SINE MIR 0 262 53 530 228 88 53 chr10 116954058 116954229 -23362536 + L2 LINE L2 3137 3313 0 509 280 96 23 chr10 116954759 116954938 -23361827 + MIR SINE MIR 54 247 -15 370 326 15 22 chr10 116956328 116956463 -23360302 - L2 LINE L2 0 3313 3180 387 290 58 0 chr10 116956713 116956920 -23359845 - L1ME3A LINE L1 -219 5951 5733 320 298 0 0 chr10 116957504 116957588 -23359177 + MIR SINE MIR 58 141 -121 259 300 15 22 chr10 116959183 116959281 -23357484 + MIR SINE MIR 16 108 -103 398 330 22 28 chr10 116959515 116959694 -23357071 - MIR3 SINE MIR -13 195 18 1180 288 78 12 chr10 116959954 116960443 -23356322 + LTR33 LTR ERVL 1 521 0 30 27 0 0 chr10 116961013 116961050 -23355715 + AT_rich Low_complexity Low_complexity 1 37 0 182 439 0 0 chr10 116961061 116961143 -23355622 - L2 LINE L2 -41 3231 3150 655 202 180 0 chr10 116961148 116961331 -23355434 + MER58A DNA MER1_type 9 224 0 356 331 0 0 chr10 116963747 116963895 -23352870 + L1MC4a LINE L1 4018 4165 -1981 194 62 31 0 chr10 116964024 116964056 -23352709 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 338 286 164 67 chr10 116964059 116964615 -23352150 + L1MC4a LINE L1 4451 5060 -1086 689 293 86 35 chr10 116964788 116965395 -23351370 + L1MC4a LINE L1 5315 5952 -1856 22 70 0 0 chr10 116965547 116965590 -23351175 + AT_rich Low_complexity Low_complexity 1 43 0 265 315 65 0 chr10 116966436 116966544 -23350221 - L2 LINE L2 -9 3263 3149 239 311 82 86 chr10 116966629 116966896 -23349869 - L2 LINE L2 -39 3233 2968 2394 94 3 7 chr10 116968121 116968430 -23348335 + AluSc SINE Alu 1 308 -1 2583 127 51 9 chr10 116968570 116969003 -23347762 - L1PA16 LINE L1 -10 6156 5706 377 188 56 97 chr10 116969044 116969232 -23347533 + L1MC/D LINE L1 5602 5787 -369 200 307 175 0 chr10 116969345 116969459 -23347306 + MIR SINE MIR 129 262 0 761 199 123 71 chr10 116969852 116970275 -23346490 - LTR56 LTR ERV1 0 445 1 203 289 91 5 chr10 116970281 116970401 -23346364 + MIR SINE MIR 25 154 -80 2413 65 0 0 chr10 116971115 116971409 -23345356 + AluY SINE Alu 1 294 -17 263 304 47 47 chr10 116971409 116971580 -23345185 + L2 LINE L2 2887 3057 -215 930 204 23 17 chr10 116971898 116972074 -23344691 + MER5B DNA MER1_type 2 178 0 500 227 98 55 chr10 116972803 116972966 -23343799 - MER69A DNA AcHobo -5 172 3 195 209 154 82 chr10 116973394 116973504 -23343261 + L2 LINE L2 3147 3264 -8 391 365 20 4 chr10 116975523 116975772 -23340993 + L1ME2 LINE L1 292 544 -6019 639 290 47 16 chr10 116976051 116976368 -23340397 + L1ME2 LINE L1 1184 1510 -4874 1643 268 58 61 chr10 116976460 116977353 -23339412 + L1ME2 LINE L1 1827 2679 -3703 2105 91 12 73 chr10 116977353 116977683 -23339082 - AluY SINE Alu -1 310 1 1643 268 58 61 chr10 116977683 116978167 -23338598 + L1ME2 LINE L1 2679 3163 -3219 2042 122 0 24 chr10 116978176 116978488 -23338277 + AluSx SINE Alu 1 305 0 671 82 21 0 chr10 116978491 116978588 -23338177 + L1MA1 LINE L1 6099 6197 -105 2514 237 119 20 chr10 116978650 116979594 -23337171 + L1ME2 LINE L1 4225 5261 -1121 997 226 47 38 chr10 116979594 116979919 -23336846 + L1ME2 LINE L1 6076 6568 -2 2033 111 52 0 chr10 116979943 116980232 -23336533 + AluSp SINE Alu 1 304 -9 396 265 202 22 chr10 116981780 116982003 -23334762 + L2 LINE L2 664 926 -2388 626 308 36 31 chr10 116982035 116982259 -23334506 + MIR SINE MIR 27 251 -11 1000 324 107 36 chr10 116982262 116983048 -23333717 + L2 LINE L2 931 1772 -1542 459 267 125 41 chr10 116983063 116983527 -23333238 - L1MC5 LINE L1 -38 7923 7421 948 314 35 12 chr10 116983637 116984060 -23332705 + L2 LINE L2 1921 2353 -961 1585 141 8 4 chr10 116984067 116984309 -23332456 + AluSx SINE Alu 1 243 -69 2269 68 3 29 chr10 116984813 116985120 -23331645 + AluY SINE Alu 1 299 -12 266 372 139 8 chr10 116985243 116985372 -23331393 + L2 LINE L2 3127 3272 0 358 271 96 27 chr10 116985980 116986168 -23330597 - L1ME3A LINE L1 -230 5940 5740 218 164 0 36 chr10 116987233 116987288 -23329477 + (TAA)n Simple_repeat Simple_repeat 2 54 0 296 317 134 7 chr10 116988098 116988240 -23328525 + MIR SINE MIR 9 168 -94 283 293 120 30 chr10 116988265 116988398 -23328367 + L2 LINE L2 3167 3311 -2 328 360 58 6 chr10 116989692 116989864 -23326901 - MIR SINE MIR -51 211 31 257 303 119 18 chr10 116991014 116991123 -23325642 - L2 LINE L2 -10 3262 3143 343 309 16 8 chr10 116991253 116991376 -23325389 - MIR SINE MIR -1 261 138 1267 244 50 37 chr10 116991537 116991883 -23324882 - LTR37B LTR ERV1 0 468 113 965 231 103 0 chr10 116991883 116992086 -23324679 - MER58A DNA MER1_type 0 224 1 1267 244 50 37 chr10 116992086 116992197 -23324568 - LTR37B LTR ERV1 -355 113 5 421 278 56 35 chr10 116992519 116992663 -23324102 + MIR SINE MIR 110 256 -6 478 246 69 46 chr10 116992995 116993170 -23323595 - MIR SINE MIR -74 188 10 337 299 22 22 chr10 116994059 116994196 -23322569 + LTR67 LTR ERVL 418 554 -3 240 269 195 9 chr10 116994699 116994838 -23321927 - MIR SINE MIR -63 145 6 539 228 49 41 chr10 116995596 116995719 -23321046 - FLAM_A SINE Alu -8 125 2 243 88 0 0 chr10 116995790 116995824 -23320941 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 397 312 128 30 chr10 116995930 116996164 -23320601 - MIR SINE MIR -5 257 1 294 29 0 0 chr10 116996266 116996301 -23320464 + (TG)n Simple_repeat Simple_repeat 2 36 0 1063 258 98 51 chr10 116996704 116997196 -23319569 - LTR33 LTR ERVL -6 515 1 228 35 0 0 chr10 116997959 116997988 -23318777 + (TG)n Simple_repeat Simple_repeat 1 29 0 209 194 0 0 chr10 116998141 116998177 -23318588 + (CA)n Simple_repeat Simple_repeat 1 36 0 265 236 75 14 chr10 116999514 116999618 -23317147 + MLT1J LTR MaLR 110 285 -330 2480 230 58 6 chr10 116999635 117000273 -23316492 + L1ME1 LINE L1 5448 6118 -48 656 267 86 31 chr10 117000592 117001036 -23315729 - LTR33A LTR ERVL -18 505 1 1353 195 160 26 chr10 117001408 117001752 -23315013 + MLT1B LTR MaLR 1 390 0 457 241 270 0 chr10 117002848 117002985 -23313780 + MER5A DNA MER1_type 9 182 -7 1078 218 82 51 chr10 117003558 117003889 -23312876 + MLT1B LTR MaLR 1 341 -49 618 216 0 0 chr10 117004197 117004294 -23312471 + MER81 DNA DNA 18 114 0 400 291 101 27 chr10 117004364 117004512 -23312253 + MIR3 SINE MIR 36 194 -14 218 244 128 47 chr10 117004602 117004688 -23312077 - L2 LINE L2 -49 3264 3172 279 265 343 0 chr10 117004775 117004877 -23311888 + MER5A DNA MER1_type 46 182 -7 2362 124 24 32 chr10 117004922 117005300 -23311465 - THE1C LTR MaLR 0 375 1 338 381 23 5 chr10 117005303 117005518 -23311247 - L2 LINE L2 -359 2955 2737 1988 143 0 3 chr10 117007161 117007472 -23309293 - AluSx SINE Alu 0 310 1 184 378 55 18 chr10 117007554 117007718 -23309047 - L3 LINE CR1 -837 740 571 1771 169 3 10 chr10 117008236 117008538 -23308227 - AluJb SINE Alu -7 305 6 687 276 52 36 chr10 117009054 117009246 -23307519 - MER82 DNA MER2_type 0 653 459 2493 66 0 10 chr10 117009258 117009424 -23307341 - AluY SINE Alu -13 298 135 2549 57 0 0 chr10 117009424 117009725 -23307040 - AluY SINE Alu -10 301 1 2493 66 0 10 chr10 117009725 117009859 -23306906 - AluY SINE Alu -176 135 1 27 29 0 0 chr10 117009860 117009894 -23306871 + AT_rich Low_complexity Low_complexity 1 34 0 2510 174 24 4 chr10 117009966 117010419 -23306346 - MER82 DNA MER2_type -190 463 2 2105 139 32 32 chr10 117012005 117012379 -23304386 - THE1C LTR MaLR 0 375 2 239 256 22 22 chr10 117013461 117013551 -23303214 - MIR3 SINE MIR -8 200 111 365 246 23 121 chr10 117013558 117013773 -23302992 - MIR SINE MIR 0 262 69 245 133 89 0 chr10 117014132 117014177 -23302588 - MLT2D LTR ERVL 0 414 366 200 196 0 18 chr10 117014183 117014239 -23302526 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1229 237 123 39 chr10 117014289 117014702 -23302063 - MLT2B1 LTR ERVL -71 449 2 22706 163 22 22 chr10 117014703 117017822 -23298943 - ERVL-B1-B1 LTR ERVL -7 5757 2640 2127 142 61 17 chr10 117017822 117018181 -23298584 - THE1C LTR MaLR 0 375 1 22706 163 22 22 chr10 117018181 117018954 -23297811 - ERVL-B1-B1 LTR ERVL -3124 2640 1868 38400 30 16 1 chr10 117018956 117024978 -23291787 + L1PA2 LINE L1 13 6155 0 32 0 0 0 chr10 117024978 117025010 -23291755 + AT_rich Low_complexity Low_complexity 1 32 0 6284 206 50 20 chr10 117025033 117026454 -23290311 - ERVL-B1-B1 LTR ERVL -3940 1824 362 1961 164 0 0 chr10 117026455 117026748 -23290017 - AluSx SINE Alu -19 293 1 995 141 0 0 chr10 117026748 117026883 -23289882 - AluSq/x SINE Alu -178 135 1 894 286 32 12 chr10 117026883 117027226 -23289539 - ERVL-B1-B1 LTR ERVL -5304 350 1 1453 229 99 47 chr10 117027226 117027266 -23289499 - MLT2B1 LTR ERVL 0 520 484 279 79 0 0 chr10 117027266 117027304 -23289461 + (TG)n Simple_repeat Simple_repeat 2 39 0 1453 229 99 47 chr10 117027304 117027756 -23289009 - MLT2B1 LTR ERVL -36 484 2 525 298 7 70 chr10 117027773 117028045 -23288720 - L2 LINE L2 0 3313 3059 1462 226 27 32 chr10 117028336 117028712 -23288053 + MLT1A2 LTR MaLR 1 374 0 410 282 40 48 chr10 117029541 117029665 -23287100 - L2 LINE L2 0 3272 3150 197 314 93 58 chr10 117030635 117030721 -23286044 + MIR3 SINE MIR 4 92 -116 932 235 65 112 chr10 117030840 117032089 -23284676 - L1MC5 LINE L1 -79 7882 6720 311 258 54 11 chr10 117032271 117032364 -23284401 + L2 LINE L2 3176 3272 0 26 0 0 0 chr10 117032414 117032440 -23284325 + AT_rich Low_complexity Low_complexity 1 26 0 260 254 79 0 chr10 117032454 117032517 -23284248 + L2 LINE L2 3246 3313 0 506 320 69 87 chr10 117032518 117033096 -23283669 + L2 LINE L2 2704 3272 0 674 274 5 32 chr10 117034065 117034251 -23282514 + MIR SINE MIR 1 181 -81 594 0 0 0 chr10 117034264 117034330 -23282435 + (TA)n Simple_repeat Simple_repeat 1 66 0 473 313 37 62 chr10 117034904 117035147 -23281618 + MLT1K LTR MaLR 24 260 -328 397 231 161 54 chr10 117035254 117035496 -23281269 + MLT1K LTR MaLR 319 586 -2 2290 122 0 0 chr10 117036583 117036887 -23279878 - AluSg SINE Alu -6 304 1 247 372 33 8 chr10 117037231 117037352 -23279413 + L2 LINE L2 3148 3271 -1 338 179 71 24 chr10 117037435 117037519 -23279246 - L1MC4 LINE L1 -1339 6703 6616 2061 125 46 60 chr10 117037519 117037888 -23278877 + THE1B LTR MaLR 1 364 0 3930 88 23 5 chr10 117037888 117038458 -23278307 + THE1B-int LTR MaLR 1 580 -1000 515 111 0 0 chr10 117038446 117038527 -23278238 + THE1B-int LTR MaLR 1500 1580 0 * 2023 127 59 34 chr10 117038527 117038881 -23277884 + THE1B LTR MaLR 1 363 -1 405 304 9 9 chr10 117039203 117039315 -23277450 + MER5A DNA MER1_type 8 119 -70 188 35 35 0 chr10 117039325 117039354 -23277411 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 700 314 105 67 chr10 117039650 117040555 -23276210 - L2 LINE L2 -433 2881 1943 300 278 43 0 chr10 117041175 117041277 -23275488 - MIR3 SINE MIR -24 184 74 530 281 75 18 chr10 117041510 117041738 -23275027 + MLT1K LTR MaLR 348 588 0 227 297 40 27 chr10 117042261 117042335 -23274430 + MIR SINE MIR 20 94 -114 21 0 0 0 chr10 117042352 117042373 -23274392 + AT_rich Low_complexity Low_complexity 1 21 0 2046 113 21 0 chr10 117042382 117042665 -23274100 - AluSx SINE Alu -23 289 1 312 307 18 30 chr10 117042768 117042934 -23273831 + MIR SINE MIR 50 213 -49 321 232 0 0 chr10 117043170 117043265 -23273500 + (TA)n Simple_repeat Simple_repeat 2 96 0 1424 152 65 56 chr10 117043299 117043457 -23273308 - Tigger2a DNA MER2_type -2347 361 206 12806 42 2 2 chr10 117043457 117045800 -23270965 + L1PA5 LINE L1 3811 6154 0 1424 152 65 56 chr10 117045800 117045997 -23270768 - Tigger2a DNA MER2_type -2502 206 3 279 0 0 0 chr10 117045997 117046028 -23270737 + (TG)n Simple_repeat Simple_repeat 2 32 0 227 61 0 0 chr10 117047490 117047523 -23269242 + MLT2A2 LTR ERVL 1 33 -420 2690 176 37 22 chr10 117047655 117048281 -23268484 + L1MB8 LINE L1 5542 6176 -2 443 293 137 29 chr10 117049482 117049687 -23267078 - MIR SINE MIR -34 228 2 700 213 146 43 chr10 117049755 117050126 -23266639 + L1ME3A LINE L1 4265 4673 -1473 772 181 0 0 chr10 117050150 117050277 -23266488 + FLAM_C SINE Alu 1 127 -16 893 283 93 40 chr10 117050277 117051216 -23265549 + L1ME3A LINE L1 4683 5681 -489 1067 197 82 10 chr10 117051231 117051536 -23265229 + L1ME3A LINE L1 5841 6167 -3 350 352 36 57 chr10 117051987 117052180 -23264585 - MIR3 SINE MIR -4 204 16 236 361 10 10 chr10 117053310 117053407 -23263358 - MIR SINE MIR -148 114 18 240 188 62 0 chr10 117054812 117054860 -23261905 - MIR SINE MIR -1 261 211 2089 153 13 21 chr10 117055399 117055777 -23260988 + THE1C LTR MaLR 1 375 0 9977 118 28 35 chr10 117055777 117057367 -23259398 + THE1C-int LTR MaLR 1 1580 0 2084 157 16 21 chr10 117057367 117057744 -23259021 + THE1C LTR MaLR 1 375 0 387 130 0 0 chr10 117058371 117058448 -23258317 + (TTAG)n Simple_repeat Simple_repeat 4 80 0 1799 166 3 7 chr10 117058449 117058738 -23258027 - AluSx SINE Alu -24 288 1 200 248 133 53 chr10 117059611 117059724 -23257041 + MIR SINE MIR 140 261 -1 488 345 98 11 chr10 117060577 117060945 -23255820 + MLT1K LTR MaLR 187 586 -2 6135 91 11 6 chr10 117061167 117062492 -23254273 + L1PA14 LINE L1 4826 6158 -3 292 367 199 0 chr10 117062850 117063106 -23253659 + L2 LINE L2 2655 2961 -353 1156 202 46 110 chr10 117063154 117063360 -23253405 - MER47B DNA MER2_type -1905 418 253 2132 87 0 45 chr10 117063360 117063648 -23253117 - AluY SINE Alu -21 290 16 1156 202 46 110 chr10 117063648 117063877 -23252888 - MER47B DNA MER2_type -2070 253 11 206 321 107 12 chr10 117063961 117064045 -23252720 + L2 LINE L2 3139 3230 -42 414 270 41 36 chr10 117064050 117064246 -23252519 + L2 LINE L2 1921 2117 -1197 4362 119 10 0 chr10 117064254 117064860 -23251905 - LTR9 LTR ERV1 0 612 1 488 303 50 70 chr10 117064923 117065223 -23251542 + L1ME4a LINE L1 5677 5970 -151 249 160 60 0 chr10 117065985 117066035 -23250730 + L2 LINE L2 1951 2003 -1311 364 271 186 7 chr10 117066194 117066334 -23250431 - MIR SINE MIR 0 262 98 910 301 71 23 chr10 117066945 117067384 -23249381 - LTR16C LTR ERVL 0 491 32 468 258 52 62 chr10 117067666 117067860 -23248905 + MIR SINE MIR 2 193 -69 337 0 0 102 chr10 117067871 117067930 -23248835 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 23 0 0 0 chr10 117068221 117068244 -23248521 + AT_rich Low_complexity Low_complexity 1 23 0 278 284 181 0 chr10 117069586 117069702 -23247063 + HERV16 LTR ERVL 4776 4912 -852 343 339 0 12 chr10 117070010 117070181 -23246584 + HERV16 LTR ERVL 4731 4899 -97 362 214 102 53 chr10 117070459 117070665 -23246100 + LTR16B LTR ERVL 249 464 0 591 15 0 0 chr10 117071695 117071763 -23245002 + (TG)n Simple_repeat Simple_repeat 2 69 0 31945 55 5 3 chr10 117072165 117078300 -23238465 + L1PA5 LINE L1 1 6152 -2 1855 145 7 3 chr10 117078731 117079020 -23237745 + AluSg1 SINE Alu 7 296 -13 265 238 0 0 chr10 117079367 117079430 -23237335 - L2 LINE L2 -17 3255 3193 21 36 0 0 chr10 117079459 117079487 -23237278 + AT_rich Low_complexity Low_complexity 1 28 0 448 284 122 30 chr10 117079885 117080082 -23236683 + MIR SINE MIR 47 261 -1 351 256 135 33 chr10 117080348 117080563 -23236202 - L1M4 LINE L1 -2654 3492 3256 346 250 39 47 chr10 117081715 117081843 -23234922 + MIR SINE MIR 28 154 -108 320 255 10 49 chr10 117083930 117084032 -23232733 + MIR SINE MIR 160 257 -5 2179 129 76 12 chr10 117084117 117084459 -23232306 + THE1B LTR MaLR 1 364 0 3791 81 10 0 chr10 117084459 117084965 -23231800 + THE1B-int LTR MaLR 1 511 -1069 275 87 43 0 chr10 117085065 117085111 -23231654 + CT-rich Low_complexity Low_complexity 5 52 0 1818 159 0 0 chr10 117085135 117085399 -23231366 - AluSx SINE Alu -40 272 9 353 190 13 25 chr10 117085409 117085488 -23231277 + LTR36 LTR ERV1 534 611 0 230 314 95 22 chr10 117086210 117086347 -23230418 + L2 LINE L2 2761 2907 -407 441 279 8 39 chr10 117086355 117086484 -23230281 + L2 LINE L2 3181 3305 -8 2168 157 6 0 chr10 117087024 117087380 -23229385 - MER46B DNA MER2_type -3 233 1 241 337 43 0 chr10 117087678 117087770 -23228995 + L2 LINE L2 3142 3237 -35 597 303 6 6 chr10 117087811 117087986 -23228779 + MIR SINE MIR 39 213 -49 5265 111 3 0 chr10 117088416 117089145 -23227620 + THE1B-int LTR MaLR 849 1579 -1 2223 102 76 15 chr10 117089145 117089488 -23227277 + THE1B LTR MaLR 1 364 0 237 281 24 37 chr10 117089627 117089709 -23227056 - MIR SINE MIR -6 256 176 478 273 38 60 chr10 117090482 117090665 -23226100 - L2 LINE L2 -1 3312 3134 405 93 0 0 chr10 117090670 117090724 -23226041 - MSTA LTR MaLR 0 428 375 668 265 46 34 chr10 117090898 117091136 -23225629 - L2 LINE L2 -196 3076 2836 650 299 68 34 chr10 117091485 117091719 -23225046 - MIR SINE MIR -8 254 13 28 0 0 0 chr10 117091759 117091787 -23224978 + AT_rich Low_complexity Low_complexity 1 28 0 1703 156 48 38 chr10 117092686 117093000 -23223765 + Tigger3(Golem) DNA MER2_type 1 317 -2712 4902 112 76 6 chr10 117093009 117093798 -23222967 + Tigger3(Golem) DNA MER2_type 2181 3024 -5 22 0 0 0 chr10 117093966 117093988 -23222777 + AT_rich Low_complexity Low_complexity 1 22 0 1000 200 19 23 chr10 117094172 117094387 -23222378 - L1MC1 LINE L1 -6 6327 6114 3277 184 41 18 chr10 117094387 117095093 -23221672 + L1MC1 LINE L1 5572 6293 -40 2315 71 0 0 chr10 117095112 117095423 -23221342 + AluY SINE Alu 3 313 0 34 0 0 0 chr10 117096861 117096895 -23219870 + AT_rich Low_complexity Low_complexity 1 34 0 23 54 0 0 chr10 117097319 117097356 -23219409 + AT_rich Low_complexity Low_complexity 1 37 0 656 332 61 8 chr10 117097360 117097622 -23219143 + L1MDb LINE L1 9 284 -6125 2073 249 53 8 chr10 117097698 117098296 -23218469 + L1MDb LINE L1 663 1287 -5122 883 165 44 6 chr10 117098308 117098490 -23218275 + MLT1C LTR MaLR 9 197 -270 1099 164 0 0 chr10 117098554 117098719 -23218046 - AluSg/x SINE Alu -21 291 127 1318 266 77 20 chr10 117098723 117099361 -23217404 + L1MDb LINE L1 851 1524 -5063 249 152 22 0 chr10 117099406 117099452 -23217313 - L1MCa LINE L1 -6283 143 97 801 123 0 0 chr10 117099463 117099597 -23217168 - AluSp/q SINE Alu 0 312 179 819 160 38 4 chr10 117099622 117099773 -23216992 + L1MCa LINE L1 234 382 -5663 393 73 18 0 chr10 117099750 117099805 -23216960 + L1MCa LINE L1 1766 1821 -4743 * 454 284 87 26 chr10 117099837 117100101 -23216664 + L1MDb LINE L1 1391 1670 -4738 2557 210 27 21 chr10 117100110 117100195 -23216570 + L1MCa LINE L1 21 104 -6322 2120 123 0 10 chr10 117100195 117100522 -23216243 + AluSq SINE Alu 1 313 0 2557 210 27 21 chr10 117100522 117100994 -23215771 + L1MCa LINE L1 104 581 -5845 3235 77 40 5 chr10 117100994 117101036 -23215729 - MLT2A1 LTR ERVL 0 444 405 270 0 0 0 chr10 117101036 117101066 -23215699 + (TA)n Simple_repeat Simple_repeat 2 31 0 3235 77 40 5 chr10 117101066 117101452 -23215313 - MLT2A1 LTR ERVL -39 405 1 10275 74 2 13 chr10 117101453 117102797 -23213968 - HERVL-A1 LTR ERVL -1 5653 4325 8300 62 8 0 chr10 117102793 117103822 -23212943 - HERVL-A1 LTR ERVL -2427 3227 2191 * 4440 164 50 75 chr10 117103905 117105064 -23211701 + L1MCa LINE L1 570 1787 -4639 2617 39 0 10 chr10 117105064 117105373 -23211392 - AluY SINE Alu -5 306 1 4440 164 50 75 chr10 117105373 117105477 -23211288 + L1MCa LINE L1 1787 1892 -4534 7194 252 33 10 chr10 117105511 117107760 -23209005 + L1MCa LINE L1 2727 5027 -1399 903 124 15 0 chr10 117107762 117107899 -23208866 + L1PA15-16 LINE L1 3 141 -6708 1929 241 53 33 chr10 117107899 117108442 -23208323 + MLT2B3 LTR ERVL 1 554 0 11734 102 2 2 chr10 117108442 117110046 -23206719 + HERVL-B3 LTR ERVL 1 1604 -4050 536 294 30 50 chr10 117110056 117110318 -23206447 - L2 LINE L2 -1227 2087 1831 686 306 19 0 chr10 117111175 117111384 -23205381 - MIR SINE MIR -8 254 42 246 374 33 0 chr10 117111472 117111563 -23205202 + MIR SINE MIR 33 126 -82 185 59 59 0 chr10 117111908 117111942 -23204823 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 189 0 0 0 chr10 117111946 117111967 -23204798 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 26 64 0 0 chr10 117112242 117112289 -23204476 + AT_rich Low_complexity Low_complexity 1 47 0 224 302 48 0 chr10 117112656 117112719 -23204046 - L2 LINE L2 -50 3222 3157 22 0 0 0 chr10 117112737 117112759 -23204006 + AT_rich Low_complexity Low_complexity 1 22 0 275 167 176 19 chr10 117112784 117112892 -23203873 - L1ME4a LINE L1 -71 6050 5926 878 185 16 70 chr10 117113367 117113808 -23202957 + MLT1A1 LTR MaLR 1 365 0 2300 68 13 36 chr10 117113863 117114172 -23202593 - AluSg SINE Alu -8 302 1 1189 280 144 37 chr10 117114504 117115242 -23201523 - L1MEd LINE L1 -1994 4135 3269 2215 112 3 0 chr10 117115242 117115545 -23201220 - AluSq SINE Alu -9 304 1 1189 280 144 37 chr10 117115545 117115770 -23200995 - L1MEd LINE L1 -2860 3269 3069 21 36 0 0 chr10 117115986 117116014 -23200751 + AT_rich Low_complexity Low_complexity 1 28 0 494 282 130 14 chr10 117116161 117116508 -23200257 - L1MEd LINE L1 -3530 2599 2213 290 284 0 24 chr10 117116592 117116719 -23200046 + T-rich Low_complexity Low_complexity 2 125 0 315 305 46 23 chr10 117116976 117117107 -23199658 - L1MEd LINE L1 -4641 1669 1536 540 273 46 110 chr10 117117259 117117976 -23198789 - L1MEd LINE L1 -4862 1257 623 2472 33 0 26 chr10 117117976 117118280 -23198485 - AluY SINE Alu -15 296 1 540 273 46 110 chr10 117118280 117118452 -23198313 - L1MEd LINE L1 -5496 623 442 236 245 36 65 chr10 117118737 117118876 -23197889 - L1MEd LINE L1 -5982 137 3 341 233 33 22 chr10 117118884 117118974 -23197791 + L2 LINE L2 3182 3272 0 759 178 0 2 chr10 117120347 117120488 -23196277 - L1PB1 LINE L1 -246 5905 5767 282 56 0 0 chr10 117120553 117120589 -23196176 + (CA)n Simple_repeat Simple_repeat 2 37 0 906 93 0 0 chr10 117120594 117120723 -23196042 - L1PB1 LINE L1 -376 5775 5647 1081 149 0 47 chr10 117120723 117120847 -23195918 + L1PB1 LINE L1 5947 6059 -92 2365 68 0 3 chr10 117120847 117121154 -23195611 - AluY SINE Alu -5 306 1 1081 149 0 47 chr10 117121154 117121243 -23195522 + L1PB1 LINE L1 6059 6151 0 615 297 70 70 chr10 117121316 117121643 -23195122 - MLT1J2 LTR MaLR -123 327 1 702 289 103 33 chr10 117122037 117122515 -23194250 + L1MC/D LINE L1 4625 5068 -1448 2787 10 0 0 chr10 117122515 117122818 -23193947 + AluY SINE Alu 1 303 -8 702 289 103 33 chr10 117122818 117123402 -23193363 + L1MC/D LINE L1 5068 5769 -747 8576 107 15 17 chr10 117123571 117124874 -23191891 - HSMAR2 DNA Mariner 0 1302 2 42 36 0 0 chr10 117125012 117125068 -23191697 + AT_rich Low_complexity Low_complexity 1 56 0 411 318 123 40 chr10 117125111 117125567 -23191198 + L1ME4a LINE L1 4649 5142 -1004 456 329 139 11 chr10 117125660 117126028 -23190737 + L1ME4a LINE L1 5264 5678 -2130 234 324 14 0 chr10 117126043 117126114 -23190651 + GA-rich Low_complexity Low_complexity 3 74 0 22 0 0 0 chr10 117126168 117126190 -23190575 + AT_rich Low_complexity Low_complexity 1 22 0 344 193 44 35 chr10 117126282 117126396 -23190369 + L1M4 LINE L1 2664 2778 -3368 1192 199 57 25 chr10 117126401 117126855 -23189910 - LTR29 LTR ERV1 0 644 137 315 286 59 0 chr10 117126837 117126956 -23189809 - MER34 LTR ERV1 -416 126 1 * 1357 222 82 51 chr10 117126958 117127092 -23189673 + L1M4 LINE L1 2783 2911 -3235 2191 115 6 6 chr10 117127092 117127405 -23189360 + AluSq SINE Alu 1 313 0 1357 222 82 51 chr10 117127405 117127977 -23188788 + L1M4 LINE L1 2911 3511 -2635 2151 125 0 7 chr10 117130234 117130539 -23186226 - AluSx SINE Alu -9 303 1 945 237 54 20 chr10 117130727 117131069 -23185696 - MSTD LTR MaLR -8 388 1 1162 148 5 11 chr10 117132426 117132615 -23184150 + AluJb SINE Alu 113 300 -12 324 265 75 30 chr10 117132690 117132890 -23183875 + L1ME4a LINE L1 5677 5885 -236 1481 189 121 31 chr10 117132959 117133414 -23183351 + LTR54B LTR ERV1 1 496 -2 344 295 21 0 chr10 117134041 117134136 -23182629 - MIR3 SINE MIR -14 194 98 2425 57 0 3 chr10 117134544 117134840 -23181925 - AluY SINE Alu -16 295 1 241 296 14 0 chr10 117134912 117134983 -23181782 - MIR SINE MIR -39 223 152 661 240 23 12 chr10 117135032 117135221 -23181544 - MER20 DNA MER1_type -50 169 1 289 269 86 20 chr10 117135378 117135477 -23181288 + MIR SINE MIR 39 135 -73 187 369 72 0 chr10 117135523 117135634 -23181131 + MIR SINE MIR 18 136 -126 200 264 19 19 chr10 117135895 117135948 -23180817 + L2 LINE L2 2748 2800 -514 303 307 84 33 chr10 117136047 117136262 -23180503 + L2 LINE L2 2844 3069 -203 248 268 111 33 chr10 117136801 117136954 -23179811 + MLT1K LTR MaLR 396 560 -28 1827 208 66 31 chr10 117137128 117137613 -23179152 - MLT1D LTR MaLR -2 503 2 265 284 63 79 chr10 117137627 117137754 -23179011 - MIR3 SINE MIR -1 207 83 250 320 39 10 chr10 117138893 117138996 -23177769 - MIR SINE MIR -73 189 84 269 304 33 0 chr10 117138996 117139088 -23177677 - MLT1J LTR MaLR -1 548 454 2463 57 0 10 chr10 117139521 117139820 -23176945 + AluY SINE Alu 5 300 -11 233 265 0 0 chr10 117140492 117140541 -23176224 - MIR3 SINE MIR -10 198 150 3814 31 0 0 chr10 117141035 117141481 -23175284 - L1PA5 LINE L1 -6 6148 5703 1654 20 0 0 chr10 117141481 117141676 -23175089 + L1PA5 LINE L1 5504 5698 -457 328 333 147 8 chr10 117141692 117141821 -23174944 + MIR3 SINE MIR 16 162 -46 571 330 60 15 chr10 117142441 117142708 -23174057 + L2 LINE L2 2808 3086 -227 1219 182 0 0 chr10 117142801 117142999 -23173766 - AluJo SINE Alu -28 284 87 476 188 8 70 chr10 117143000 117143128 -23173637 + L2 LINE L2 3133 3252 -61 397 230 129 65 chr10 117143773 117143990 -23172775 - MIR SINE MIR 0 262 32 434 278 80 21 chr10 117144088 117144275 -23172490 - L2 LINE L2 0 3313 3116 278 279 23 23 chr10 117144769 117144855 -23171910 - L2 LINE L2 0 3313 3228 192 102 61 0 chr10 117144896 117144945 -23171820 + GA-rich Low_complexity Low_complexity 1 52 0 328 237 52 69 chr10 117145056 117145229 -23171536 - MLT1J LTR MaLR -58 453 284 314 294 15 15 chr10 117145343 117145479 -23171286 + L1MCb LINE L1 3 138 -5907 6374 184 93 66 chr10 117145566 117147223 -23169542 - MER52A LTR ERV1 0 1755 55 243 220 0 0 chr10 117147575 117147634 -23169131 - MER52A LTR ERV1 -1696 59 1 3305 212 152 41 chr10 117147634 117148389 -23168376 + L1MCb LINE L1 227 897 -5667 668 67 0 0 chr10 117148389 117148479 -23168286 + L1PB3 LINE L1 6065 6154 0 3305 212 152 41 chr10 117148479 117149806 -23166959 + L1MCb LINE L1 897 2601 -3963 7105 174 56 13 chr10 117149829 117150562 -23166203 + L1PA15 LINE L1 3877 4577 -1588 2139 135 0 0 chr10 117150562 117150859 -23165906 + AluSg SINE Alu 1 297 -13 7105 174 56 13 chr10 117150859 117152373 -23164392 + L1PA15 LINE L1 4577 6163 -2 21 0 0 0 chr10 117152428 117152449 -23164316 + AT_rich Low_complexity Low_complexity 1 21 0 2073 164 0 0 chr10 117152504 117152809 -23163956 + AluSx SINE Alu 6 310 -2 22 0 0 0 chr10 117152809 117152831 -23163934 + AT_rich Low_complexity Low_complexity 1 22 0 4938 234 77 22 chr10 117152831 117154613 -23162152 + L1MCb LINE L1 2621 4501 -2063 304 177 16 0 chr10 117154617 117154679 -23162086 + L1MCb LINE L1 4946 5008 -1556 239 329 53 0 chr10 117155644 117155720 -23161045 + MIR SINE MIR 106 185 -77 2511 186 42 13 chr10 117156714 117157256 -23159509 + MER89 LTR ERV1 2 559 0 210 71 0 0 chr10 117157615 117157643 -23159122 + (CAT)n Simple_repeat Simple_repeat 2 29 0 237 33 0 0 chr10 117157661 117157691 -23159074 + (CA)n Simple_repeat Simple_repeat 1 30 0 434 333 18 6 chr10 117159029 117159246 -23157519 + MIR SINE MIR 8 262 0 255 316 68 43 chr10 117159460 117159577 -23157188 + MIR SINE MIR 18 137 -71 329 292 106 19 chr10 117159606 117159758 -23157007 - MIR SINE MIR -25 237 72 444 305 58 28 chr10 117159758 117159991 -23156774 + MIR SINE MIR 3 246 -16 607 267 43 35 chr10 117160299 117160531 -23156234 - L2 LINE L2 -4 3309 3076 306 197 0 0 chr10 117161255 117161321 -23155444 + L1ME4a LINE L1 5980 6045 -76 540 190 12 129 chr10 117161508 117161671 -23155094 + MER63 DNA MER1_type 1 770 -292 210 328 205 16 chr10 117162449 117162571 -23154194 - MIR SINE MIR -77 185 41 719 224 37 37 chr10 117162670 117162884 -23153881 + MLT1J2 LTR MaLR 1 214 -236 226 329 44 51 chr10 117163703 117163861 -23152904 - MIR SINE MIR -33 229 73 874 203 0 26 chr10 117166050 117166242 -23150523 + AluJb SINE Alu 1 187 -125 485 176 0 7 chr10 117166346 117166494 -23150271 + (TA)n Simple_repeat Simple_repeat 1 147 0 448 237 244 0 chr10 117166562 117166718 -23150047 + MIR SINE MIR 69 262 0 657 249 58 29 chr10 117166802 117167007 -23149758 + MIR SINE MIR 7 217 -45 378 217 19 9 chr10 117167353 117167459 -23149306 - LTR33A LTR ERVL 0 523 417 1897 191 133 11 chr10 117167920 117168370 -23148395 - MLT1D LTR MaLR 0 505 1 550 309 25 40 chr10 117168765 117168966 -23147799 - MIR SINE MIR -49 213 16 1624 231 13 24 chr10 117168968 117169344 -23147421 - MLT1A2 LTR MaLR 0 374 3 210 318 71 32 chr10 117169369 117169495 -23147270 - L2 LINE L2 -640 2674 2544 2292 103 7 0 chr10 117169740 117170042 -23146723 + AluSx SINE Alu 1 304 -8 272 325 64 25 chr10 117170103 117170429 -23146336 + L1ME LINE L1 5543 5881 -289 21 36 0 0 chr10 117170736 117170764 -23146001 + AT_rich Low_complexity Low_complexity 1 28 0 236 225 67 56 chr10 117170783 117170872 -23145893 + MIR SINE MIR 138 227 -35 195 306 0 14 chr10 117170970 117171042 -23145723 - MIR SINE MIR -56 206 136 183 291 23 70 chr10 117171297 117171383 -23145382 + MIR SINE MIR 95 176 -86 464 264 169 36 chr10 117173244 117173581 -23143184 - MLT1H LTR MaLR -49 500 119 1792 138 86 40 chr10 117173598 117173946 -23142819 + THE1B LTR MaLR 1 364 0 356 286 103 46 chr10 117174447 117174776 -23141989 - L1ME LINE L1 -476 5645 5298 233 308 36 24 chr10 117175006 117175259 -23141506 - L1ME LINE L1 -1089 5057 4802 677 259 13 6 chr10 117175660 117175818 -23140947 + MIR SINE MIR 3 161 -101 510 321 84 22 chr10 117175903 117176177 -23140588 + MLT1J1 LTR MaLR 63 353 -93 2306 78 3 0 chr10 117176190 117176474 -23140291 - AluSg SINE Alu -25 285 1 477 323 71 19 chr10 117176672 117177337 -23139428 - L1ME LINE L1 -1832 4314 3616 921 189 5 0 chr10 117178185 117178375 -23138390 - L1MA4 LINE L1 -15 6285 6095 212 371 84 7 chr10 117178508 117178651 -23138114 - MIR SINE MIR -47 215 62 285 130 0 54 chr10 117181117 117181209 -23135556 + (TTTA)n Simple_repeat Simple_repeat 3 89 0 426 264 118 14 chr10 117181583 117181727 -23135038 - Charlie8 DNA MER1_type -2152 265 107 912 132 16 28 chr10 117182426 117182608 -23134157 - L1MA7 LINE L1 -1 6290 6111 351 146 9 118 chr10 117182610 117182720 -23134045 + L1MA7 LINE L1 5937 6034 -257 382 145 118 0 chr10 117182896 117182972 -23133793 + L1MA7 LINE L1 6042 6126 -165 1815 207 29 107 chr10 117182976 117183704 -23133061 - L1MC5 LINE L1 -626 7335 6665 242 250 0 0 chr10 117183706 117183754 -23133011 + polypyrimidine Low_complexity Low_complexity 1 48 0 327 208 74 34 chr10 117184364 117184409 -23132356 - L1MA10 LINE L1 -9 6325 6281 4128 258 52 28 chr10 117184409 117186812 -23129953 - L1ME1 LINE L1 -48 6118 3628 420 304 154 18 chr10 117186991 117187211 -23129554 + MIR SINE MIR 3 252 -10 206 304 14 14 chr10 117188451 117188520 -23128245 - L2 LINE L2 -1 3271 3203 1287 305 71 13 chr10 117190077 117190543 -23126222 + L2 LINE L2 2485 2977 -337 953 246 35 79 chr10 117190587 117190993 -23125772 + L2 LINE L2 2847 3234 -79 193 233 293 8 chr10 117191068 117191201 -23125564 - MIR SINE MIR -89 173 3 285 299 165 12 chr10 117192136 117192300 -23124465 + L2 LINE L2 2570 2758 -556 270 282 64 27 chr10 117192307 117192435 -23124330 - MER5B DNA MER1_type 0 178 63 199 313 61 54 chr10 117192452 117192599 -23124166 + L2 LINE L2 2766 2913 -401 228 95 0 48 chr10 117192898 117192940 -23123825 + MIR SINE MIR 219 258 -4 236 353 22 15 chr10 117193131 117193267 -23123498 - MER5A DNA MER1_type -37 152 16 786 199 21 5 chr10 117194561 117194747 -23122018 - L1MA7 LINE L1 -1 6290 6102 601 284 27 11 chr10 117194952 117195135 -23121630 + MIR SINE MIR 67 252 -10 260 267 47 12 chr10 117195136 117195222 -23121543 - L2 LINE L2 -31 3241 3153 1797 188 8 40 chr10 117195544 117195921 -23120844 + MLT1A1 LTR MaLR 1 365 0 224 286 18 0 chr10 117195922 117195978 -23120787 - L2 LINE L2 -6 3307 3251 189 250 150 0 chr10 117196110 117196170 -23120595 + MIR SINE MIR 85 153 -109 272 325 16 0 chr10 117196282 117196408 -23120357 + (ATG)n Simple_repeat Simple_repeat 2 129 0 263 246 174 0 chr10 117196419 117196488 -23120277 - L2 LINE L2 -4 3309 3229 202 305 85 68 chr10 117197337 117197455 -23119310 + L2 LINE L2 3151 3270 -2 241 285 177 27 chr10 117197538 117197724 -23119041 + MIR SINE MIR 49 262 0 205 360 64 8 chr10 117197892 117198017 -23118748 - L2 LINE L2 -13 3300 3169 217 234 16 0 chr10 117198019 117198083 -23118682 + (CA)n Simple_repeat Simple_repeat 1 65 0 524 265 70 58 chr10 117198233 117198609 -23118156 + L1M4 LINE L1 2798 3186 -2960 1947 137 27 0 chr10 117198609 117198902 -23117863 + AluJo SINE Alu 1 301 -11 524 265 70 58 chr10 117198902 117198941 -23117824 + L1M4 LINE L1 3186 3223 -2923 548 345 42 24 chr10 117199842 117200222 -23116543 + MER110-int LTR ERV1 3262 3648 -3153 349 332 71 14 chr10 117200404 117200684 -23116081 + MER110-int LTR ERV1 2108 2403 -2244 3262 237 32 14 chr10 117200851 117201721 -23115044 - L1M4 LINE L1 -1260 4886 4001 643 347 45 13 chr10 117202655 117202969 -23113796 + L3 LINE CR1 1250 1573 -4 481 314 0 58 chr10 117203006 117203178 -23113587 + MIR3 SINE MIR 38 199 -9 3482 50 5 2 chr10 117203218 117203659 -23113106 + L1PA5 LINE L1 5710 6151 -3 379 295 121 7 chr10 117203758 117203907 -23112858 - MER63A DNA MER1_type 0 210 45 539 259 8 8 chr10 117204004 117204135 -23112630 + Charlie2 DNA MER1_type 194 324 -2458 1977 228 90 43 chr10 117204141 117204984 -23111781 + Charlie2 DNA MER1_type 1859 2741 -121 187 311 144 0 chr10 117206708 117206798 -23109967 - L2 LINE L2 0 3272 3170 275 241 125 45 chr10 117206807 117206919 -23109846 + MLT1H LTR MaLR 35 155 -394 561 208 43 100 chr10 117207024 117207255 -23109510 + MLT1H LTR MaLR 328 545 -4 470 275 176 23 chr10 117207260 117207522 -23109243 - L2 LINE L2 -58 3255 2954 207 220 0 0 chr10 117208476 117208526 -23108239 + GA-rich Low_complexity Low_complexity 4 53 0 477 287 16 8 chr10 117210204 117210333 -23106432 - MIR3 SINE MIR -68 140 11 305 300 71 59 chr10 117210489 117210665 -23106100 + MIR SINE MIR 2 178 -78 450 0 0 0 chr10 117211129 117211179 -23105586 + (CA)n Simple_repeat Simple_repeat 2 51 0 1782 330 90 41 chr10 117211270 117212706 -23104059 + L2 LINE L2 1721 3271 -1 410 279 59 15 chr10 117213526 117213662 -23103103 + MIR SINE MIR 73 214 -48 293 280 144 0 chr10 117214588 117214720 -23102045 + MIR3 SINE MIR 19 169 -39 206 333 19 0 chr10 117214714 117214768 -23101997 - L3b LINE CR1 -7 1576 1522 * 272 353 67 17 chr10 117214870 117214989 -23101776 + MIR SINE MIR 25 149 -59 343 216 169 102 chr10 117216223 117216459 -23100306 + MLT1H LTR MaLR 209 460 -89 226 175 0 0 chr10 117216513 117216553 -23100212 + MLT1H LTR MaLR 486 525 -24 294 29 0 0 chr10 117217034 117217069 -23099696 + (A)n Simple_repeat Simple_repeat 1 35 0 180 206 41 96 chr10 117218263 117218336 -23098429 + MIR SINE MIR 65 133 -75 228 170 0 0 chr10 117219501 117219554 -23097211 + (CA)n Simple_repeat Simple_repeat 1 53 0 261 27 0 0 chr10 117219874 117219911 -23096854 - L1MA3 LINE L1 0 6305 6269 300 305 0 0 chr10 117219917 117219999 -23096766 + L1MC4 LINE L1 6614 6695 -1347 1445 109 5 18 chr10 117220006 117220227 -23096538 - L1MA1 LINE L1 -10 6292 6075 243 242 45 68 chr10 117220375 117220507 -23096258 + L1ME4a LINE L1 5987 6115 -6 290 247 25 0 chr10 117221307 117221388 -23095377 + GA-rich Low_complexity Low_complexity 3 85 0 916 238 117 3 chr10 117222339 117222629 -23094136 + L1MD2 LINE L1 5642 5964 -395 4128 244 81 27 chr10 117222679 117224050 -23092715 - L1M4 LINE L1 -1607 4539 3076 1866 159 3 0 chr10 117224050 117224362 -23092403 - AluSx SINE Alu 0 313 1 4128 244 81 27 chr10 117224362 117224503 -23092262 - L1M4 LINE L1 -3070 3076 2944 298 295 16 16 chr10 117224500 117224629 -23092136 - L1ME LINE L1 -5435 635 507 * 13667 29 0 2 chr10 117225049 117227452 -23089313 + L1PA3 LINE L1 3758 6155 0 332 268 45 27 chr10 117227981 117228093 -23088672 + L2 LINE L2 3159 3272 0 315 0 0 0 chr10 117229199 117229234 -23087531 + (T)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr10 117229237 117229267 -23087498 + AT_rich Low_complexity Low_complexity 1 30 0 6162 30 3 6 chr10 117229267 117230067 -23086698 - L1PA3 LINE L1 0 6155 5380 6118 19 0 0 chr10 117230048 117230805 -23085960 + L1PA3 LINE L1 4637 5393 -753 * 754 279 51 13 chr10 117230971 117231208 -23085557 + MIR SINE MIR 7 252 -10 596 289 126 31 chr10 117231630 117231936 -23084829 + L2 LINE L2 2924 3270 -43 2283 103 47 36 chr10 117231936 117232296 -23084469 + THE1B LTR MaLR 1 364 0 596 289 126 31 chr10 117232296 117232345 -23084420 + L2 LINE L2 3270 3313 0 206 323 89 48 chr10 117232483 117232607 -23084158 + L2 LINE L2 3143 3271 -1 240 239 0 28 chr10 117233645 117233716 -23083049 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 291 277 24 0 chr10 117234019 117234102 -23082663 + (TA)n Simple_repeat Simple_repeat 2 86 0 804 267 97 46 chr10 117234349 117234643 -23082122 - LTR33 LTR ERVL -18 503 178 846 171 27 16 chr10 117234643 117234830 -23081935 - MER53 DNA DNA 0 189 1 804 267 97 46 chr10 117234830 117234970 -23081795 - LTR33 LTR ERVL -343 178 47 258 269 229 10 chr10 117235395 117235696 -23081069 + L1MC4a LINE L1 5901 6267 -1541 975 179 17 123 chr10 117235776 117236127 -23080638 + L1MD2 LINE L1 6045 6358 -1 1688 91 0 0 chr10 117236132 117236341 -23080424 + AluSc SINE Alu 1 209 -100 565 291 45 5 chr10 117236343 117236566 -23080199 + L1MC4 LINE L1 7159 7390 -652 311 310 103 26 chr10 117236659 117236891 -23079874 - L2 LINE L2 -215 3057 2808 446 230 138 13 chr10 117238508 117238660 -23078105 + MIR3 SINE MIR 15 185 -23 28 48 0 0 chr10 117239487 117239529 -23077236 + AT_rich Low_complexity Low_complexity 1 42 0 238 305 42 32 chr10 117239745 117239840 -23076925 + MLT1K LTR MaLR 61 156 -432 905 236 0 0 chr10 117239843 117240025 -23076740 - AluJb SINE Alu -9 303 122 798 136 23 15 chr10 117240054 117240234 -23076531 - FLAM_C SINE Alu 0 181 1 506 258 101 80 chr10 117240267 117240302 -23076463 + MLT1K LTR MaLR 189 222 -366 2182 134 0 0 chr10 117240302 117240609 -23076156 + AluSx SINE Alu 1 307 -5 506 258 101 80 chr10 117240609 117240961 -23075804 + MLT1K LTR MaLR 222 584 -4 2854 245 47 16 chr10 117241009 117242152 -23074613 - L1ME1 LINE L1 -4 6231 5056 2201 258 31 28 chr10 117242158 117242870 -23073895 - L1ME1 LINE L1 -5648 748 35 189 285 22 161 chr10 117243083 117243220 -23073545 - L2 LINE L2 -4 3309 3192 777 250 25 25 chr10 117243237 117243441 -23073324 - MIR SINE MIR -49 213 10 800 284 72 8 chr10 117243505 117243769 -23072996 - L2 LINE L2 -185 3128 2848 211 296 10 51 chr10 117243767 117243865 -23072900 + MIR SINE MIR 169 262 0 * 212 330 88 11 chr10 117243908 117243999 -23072766 - L2 LINE L2 -175 3097 3000 264 266 126 63 chr10 117244750 117244893 -23071872 + MER5A DNA MER1_type 10 161 -28 352 226 43 108 chr10 117244992 117245178 -23071587 - MER5B DNA MER1_type -1 177 4 554 319 41 32 chr10 117245191 117245430 -23071335 - MER102b DNA MER1_type -1087 341 97 2119 137 0 0 chr10 117245430 117245729 -23071036 + AluSx SINE Alu 1 299 -13 554 319 41 32 chr10 117245729 117245827 -23070938 - MER102b DNA MER1_type -1331 97 1 2082 114 42 25 chr10 117246315 117246674 -23070091 - L1PB1 LINE L1 0 6151 5787 40920 32 22 1 chr10 117246686 117252709 -23064056 + L1PA2 LINE L1 1 6151 -4 425 93 0 13 chr10 117253202 117253277 -23063488 - L1PB1 LINE L1 -799 5352 5279 198 284 40 27 chr10 117253278 117253352 -23063413 - MER5A DNA MER1_type -114 75 1 838 176 139 9 chr10 117254103 117254319 -23062446 + MIR SINE MIR 12 255 -7 293 294 39 38 chr10 117255431 117255595 -23061170 - MLT1J2 LTR MaLR 0 428 250 582 213 69 23 chr10 117255694 117255868 -23060897 - MLT1J2 LTR MaLR -267 183 2 211 387 28 0 chr10 117256345 117256451 -23060314 - MIR SINE MIR -10 252 144 * 362 296 184 10 chr10 117256442 117256648 -23060117 - MIR SINE MIR -1 261 20 4542 209 36 8 chr10 117257404 117258450 -23058315 + Tigger6a DNA MER2_type 1 1076 -7 200 320 180 0 chr10 117258976 117259076 -23057689 - MIR SINE MIR -139 123 6 496 277 0 0 chr10 117259298 117259399 -23057366 - MER5A DNA MER1_type 0 189 89 243 61 0 0 chr10 117259457 117259490 -23057275 + (A)n Simple_repeat Simple_repeat 1 33 0 502 188 0 0 chr10 117260460 117260540 -23056225 - MER5A DNA MER1_type -109 80 1 1030 225 22 22 chr10 117261054 117261285 -23055480 - MIR SINE MIR -22 240 10 203 289 21 72 chr10 117261342 117261439 -23055326 - MIR SINE MIR -56 206 115 417 310 94 6 chr10 117262256 117262427 -23054338 + MIR SINE MIR 20 205 -57 2077 187 17 0 chr10 117262996 117263355 -23053410 + MLT1A1 LTR MaLR 1 365 0 351 328 11 70 chr10 117263508 117263779 -23052986 + MLT1K LTR MaLR 334 588 0 330 234 0 0 chr10 117264631 117264695 -23052070 - MIR SINE MIR -113 149 86 292 254 0 0 chr10 117264910 117264977 -23051788 - MER5C DNA MER1_type -257 67 1 * 371 233 10 48 chr10 117264977 117265076 -23051689 - MIR SINE MIR -167 95 1 242 283 19 0 chr10 117265735 117265788 -23050977 - L2 LINE L2 -14 3258 3205 852 271 36 5 chr10 117265985 117266206 -23050559 - MIR SINE MIR -18 244 17 429 263 131 19 chr10 117266529 117266585 -23050180 - MER5B DNA MER1_type 0 178 130 2176 115 133 18 chr10 117266585 117266969 -23049796 - MSTA LTR MaLR 0 428 1 429 263 131 19 chr10 117266969 117267072 -23049693 - MER5B DNA MER1_type -48 130 1 1183 130 0 0 chr10 117267982 117268144 -23048621 - AluSg/x SINE Alu -2 308 147 351 296 143 23 chr10 117268236 117268452 -23048313 + MIR SINE MIR 20 261 -1 267 333 112 45 chr10 117268587 117269035 -23047730 + MLT1K LTR MaLR 105 582 -6 363 313 40 20 chr10 117270240 117270390 -23046375 + MIR SINE MIR 100 252 -10 279 303 49 78 chr10 117270556 117270698 -23046067 + L2 LINE L2 3134 3271 -1 742 238 60 25 chr10 117271049 117271385 -23045380 - LTR35 LTR ERV1 0 677 338 309 195 61 24 chr10 117272068 117272150 -23044615 - L1ME4a LINE L1 -35 6086 6002 202 56 56 0 chr10 117272160 117272196 -23044569 + (CA)n Simple_repeat Simple_repeat 2 39 0 267 300 11 0 chr10 117272439 117272529 -23044236 - L1ME LINE L1 -488 5633 5543 511 92 25 25 chr10 117272799 117272918 -23043847 + Tigger3(Golem) DNA MER2_type 2335 2453 -576 1397 121 15 44 chr10 117273021 117273294 -23043471 - Tigger3(Golem) DNA MER2_type -305 2724 2460 1226 184 93 3 chr10 117273282 117273592 -23043173 - Tigger3(Golem) DNA MER2_type -2680 349 12 * 364 200 20 0 chr10 117273604 117273704 -23043061 + (TA)n Simple_repeat Simple_repeat 1 102 0 731 318 78 50 chr10 117273709 117274477 -23042288 - L1ME LINE L1 -1201 4945 4156 4576 177 31 33 chr10 117274521 117274575 -23042190 - L1MC2 LINE L1 -7 6337 6284 2341 97 0 3 chr10 117274575 117274885 -23041880 + AluSp SINE Alu 1 309 -4 4576 177 31 33 chr10 117274885 117275884 -23040881 - L1MC2 LINE L1 -60 6284 5286 2167 201 17 5 chr10 117276149 117276568 -23040197 - MSTB LTR MaLR 0 426 3 2171 205 128 2 chr10 117276574 117276610 -23040155 - MLT2B3 LTR ERVL 0 554 524 249 108 0 0 chr10 117276610 117276647 -23040118 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 2171 205 128 2 chr10 117276647 117277102 -23039663 - MLT2B3 LTR ERVL -30 524 1 217 234 0 65 chr10 117277317 117277328 -23039437 + T-rich Low_complexity Low_complexity 6 16 -89 2391 81 0 0 chr10 117277328 117277625 -23039140 + AluY SINE Alu 1 297 -14 217 234 0 65 chr10 117277625 117277720 -23039045 + T-rich Low_complexity Low_complexity 16 105 0 2375 139 50 8 chr10 117277874 117278234 -23038531 + THE1C LTR MaLR 1 375 0 9987 114 22 64 chr10 117278234 117279883 -23036882 + THE1C-int LTR MaLR 1 1580 0 391 169 0 0 chr10 117279898 117279963 -23036802 + THE1C LTR MaLR 155 219 -156 334 243 0 14 chr10 117280527 117280601 -23036164 + MIR SINE MIR 187 259 -3 414 219 15 95 chr10 117281362 117281499 -23035266 - MER94 DNA DNA -8 126 1 2210 135 44 97 chr10 117281622 117282074 -23034691 - MSTA LTR MaLR 0 428 1 551 259 57 25 chr10 117282953 117283111 -23033654 + MIR SINE MIR 13 175 -87 198 288 34 0 chr10 117283157 117283216 -23033549 + L2 LINE L2 3244 3304 -9 225 119 95 0 chr10 117283396 117283438 -23033327 - L2 LINE L2 -5 3308 3263 446 317 19 19 chr10 117285275 117285436 -23031329 + MIR SINE MIR 48 208 -54 1563 217 56 54 chr10 117285998 117286481 -23030284 - MLT1D LTR MaLR -19 486 3 693 263 93 13 chr10 117287386 117287622 -23029143 + MLT1I LTR MaLR 17 271 -138 1043 97 119 0 chr10 117287718 117287894 -23028871 - L1MC2 LINE L1 -11 6333 6137 1858 190 54 3 chr10 117287899 117288268 -23028497 - L1MC3 LINE L1 -196 7589 7202 255 311 0 0 chr10 117288283 117288357 -23028408 - MLT1F1 LTR MaLR -442 125 52 325 177 0 73 chr10 117288360 117288456 -23028309 - L1MC3 LINE L1 -675 7110 7022 * 5869 102 27 1 chr10 117288434 117289273 -23027492 - L1PA11 LINE L1 0 6174 5314 4479 174 46 2 chr10 117289247 117290096 -23026669 - L1MC3 LINE L1 -725 7060 6175 * 23 54 0 0 chr10 117291252 117291289 -23025476 + AT_rich Low_complexity Low_complexity 1 37 0 376 255 120 31 chr10 117292527 117292719 -23024046 + L1MC4a LINE L1 5724 5932 -1876 27 29 0 0 chr10 117292724 117292758 -23024007 + AT_rich Low_complexity Low_complexity 1 34 0 243 255 198 7 chr10 117293045 117293136 -23023629 + MIR3 SINE MIR 50 159 -49 491 279 8 0 chr10 117293372 117293494 -23023271 - MIR SINE MIR -17 245 123 354 286 59 0 chr10 117293717 117293836 -23022929 + MER5A DNA MER1_type 1 126 -63 2457 84 0 0 chr10 117293894 117294203 -23022562 + AluY SINE Alu 1 309 -2 180 158 0 0 chr10 117294446 117294484 -23022281 + A-rich Low_complexity Low_complexity 1 38 0 264 342 111 0 chr10 117294486 117294603 -23022162 + MER5B DNA MER1_type 48 177 -1 747 210 45 34 chr10 117294628 117294804 -23021961 - MER5B DNA MER1_type 0 178 1 277 361 142 10 chr10 117295444 117295649 -23021116 + MIR SINE MIR 21 252 -10 420 337 98 36 chr10 117296494 117296995 -23019770 + L2 LINE L2 1943 2474 -840 204 376 53 15 chr10 117297137 117297270 -23019495 - L2 LINE L2 0 3313 3176 2293 107 3 3 chr10 117297357 117297665 -23019100 + AluSp SINE Alu 1 308 -5 481 268 42 75 chr10 117297766 117297979 -23018786 - MIR SINE MIR -10 252 47 1120 182 78 54 chr10 117298082 117298378 -23018387 + MER33 DNA MER1_type 22 324 0 343 307 113 20 chr10 117299046 117299196 -23017569 + MIR SINE MIR 26 189 -73 3344 159 21 76 chr10 117299217 117299942 -23016823 - LTR8 LTR ERV1 0 691 7 2286 132 0 46 chr10 117299943 117300315 -23016450 + THE1A LTR MaLR 1 355 0 8451 165 51 54 chr10 117300317 117301971 -23014794 + MST-int LTR MaLR 3 1651 0 2391 105 25 47 chr10 117301973 117302334 -23014431 + THE1A LTR MaLR 3 355 0 186 318 0 0 chr10 117302347 117302391 -23014374 + L2 LINE L2 3211 3254 -18 504 286 97 0 chr10 117304285 117304460 -23012305 + MIR SINE MIR 15 206 -56 373 333 73 37 chr10 117305793 117306066 -23010699 - LTR16C LTR ERVL -120 371 89 352 325 61 38 chr10 117306342 117306546 -23010219 - MIR SINE MIR -6 256 50 441 273 50 8 chr10 117306821 117306942 -23009823 + L2 LINE L2 3147 3272 0 1234 184 43 96 chr10 117307950 117308368 -23008397 - LTR37A LTR ERV1 0 426 31 192 281 48 55 chr10 117309055 117309201 -23007564 - L2 LINE L2 -168 3104 2960 303 71 0 0 chr10 117311045 117311087 -23005678 + (TG)n Simple_repeat Simple_repeat 2 43 0 264 218 18 0 chr10 117311394 117311449 -23005316 - MIR3 SINE MIR -25 183 128 729 297 115 25 chr10 117311460 117311895 -23004870 - MLT1K LTR MaLR 0 588 115 288 336 99 38 chr10 117313288 117313423 -23003342 - MIR SINE MIR -35 227 73 1957 148 10 0 chr10 117313423 117313720 -23003045 + AluSx SINE Alu 1 300 -12 288 336 99 38 chr10 117313720 117313795 -23002970 - MIR SINE MIR -189 73 4 560 282 94 14 chr10 117313995 117314208 -23002557 - MIR SINE MIR -12 250 21 201 39 0 0 chr10 117314810 117314836 -23001929 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 243 288 82 0 chr10 117315270 117315343 -23001422 - L2 LINE L2 -9 3263 3185 323 364 169 29 chr10 117315462 117316277 -23000488 - L2 LINE L2 -337 2977 2049 1603 155 28 161 chr10 117316597 117317094 -22999671 - MSTB1 LTR MaLR 0 432 2 228 100 0 0 chr10 117317439 117317479 -22999286 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 554 201 271 0 chr10 117318656 117318800 -22997965 - MER5A DNA MER1_type 0 189 7 184 304 37 58 chr10 117318842 117319033 -22997732 + MIR SINE MIR 28 214 -48 542 269 59 59 chr10 117319255 117319511 -22997254 - MIR SINE MIR -1 261 6 269 302 13 16 chr10 117319869 117319970 -22996795 + MIR SINE MIR 16 118 -90 586 224 128 56 chr10 117320446 117320642 -22996123 - MER63A DNA MER1_type 0 210 1 184 206 0 0 chr10 117322010 117322044 -22994721 + MER5B DNA MER1_type 87 120 -58 1749 136 66 7 chr10 117322096 117322129 -22994636 - MLT2C2 LTR ERVL -2 462 432 405 109 0 0 chr10 117322129 117322193 -22994572 + (TCCA)n Simple_repeat Simple_repeat 3 66 0 1749 136 66 7 chr10 117322193 117322432 -22994333 - MLT2C2 LTR ERVL -32 432 174 223 309 9 45 chr10 117322485 117322595 -22994170 + L2 LINE L2 1355 1460 -1854 1716 261 45 21 chr10 117323041 117323658 -22993107 + L1MD1 LINE L1 3313 3944 -2202 2317 127 36 33 chr10 117323659 117324020 -22992745 - THE1B LTR MaLR -2 362 1 1075 123 0 0 chr10 117324102 117324248 -22992517 - THE1C LTR MaLR -229 146 1 865 144 0 62 chr10 117324304 117324464 -22992301 + MER21A LTR ERV1 13 162 -769 * 1901 174 56 36 chr10 117324462 117324852 -22991913 + MER21A LTR ERV1 417 814 -117 662 244 91 0 chr10 117324883 117325059 -22991706 + L1MD1 LINE L1 3972 4163 -1983 475 213 81 37 chr10 117325059 117325195 -22991570 - MER21A LTR ERV1 -789 142 1 824 272 86 28 chr10 117325268 117325662 -22991103 + L1MD1 LINE L1 4171 4587 -1559 572 165 0 0 chr10 117325678 117325763 -22991002 - LTR12 LTR ERV1 -5 709 625 377 231 34 54 chr10 117325763 117325893 -22990872 - LTR30 LTR ERV1 -79 643 378 720 106 13 2 chr10 117325893 117326008 -22990757 - LTR12 LTR ERV1 -456 258 53 271 211 0 0 chr10 117326008 117326060 -22990705 - LTR30 LTR ERV1 -670 52 1 4226 191 110 36 chr10 117326075 117327583 -22989182 + L1MD1 LINE L1 4616 6242 0 2654 233 99 92 chr10 117327602 117329040 -22987725 + L1MEc LINE L1 43 1495 -4901 327 236 106 80 chr10 117329108 117329307 -22987458 - LTR50 LTR ERVL -582 213 10 317 339 64 22 chr10 117329374 117329707 -22987058 + L1MC/D LINE L1 5384 5737 -534 272 157 78 0 chr10 117329870 117329921 -22986844 - MLT2B1 LTR ERVL 0 520 466 * 280 164 15 60 chr10 117329919 117329986 -22986779 + MLT2B1 LTR ERVL 417 480 -40 201 176 0 0 chr10 117329986 117330020 -22986745 + (TA)n Simple_repeat Simple_repeat 2 35 0 207 0 0 0 chr10 117330028 117330051 -22986714 + (CA)n Simple_repeat Simple_repeat 2 24 0 382 318 76 0 chr10 117330412 117330544 -22986221 + MIR3 SINE MIR 4 145 -63 381 271 120 0 chr10 117330961 117331094 -22985671 - MER103 DNA DNA -15 151 3 661 324 94 13 chr10 117331107 117331517 -22985248 - LTR16C LTR ERVL 0 491 1 1034 173 0 30 chr10 117331765 117331933 -22984832 - FAM SINE Alu -12 163 1 2630 58 0 0 chr10 117332193 117332503 -22984262 + AluY SINE Alu 1 310 -1 266 196 0 18 chr10 117333006 117333062 -22983703 - L2 LINE L2 -80 3233 3179 2241 117 3 0 chr10 117333496 117333795 -22982970 - AluSp SINE Alu -13 300 1 1966 158 0 3 chr10 117334950 117335254 -22981511 - AluJb SINE Alu -9 303 1 323 279 25 66 chr10 117335687 117335809 -22980956 + MIR3 SINE MIR 91 207 -1 2797 127 29 2 chr10 117336568 117336979 -22979786 - MSTA LTR MaLR -6 422 1 1256 168 5 0 chr10 117337168 117337371 -22979394 + MSTB LTR MaLR 1 204 -222 904 198 213 15 chr10 117337498 117337771 -22978994 + MER110A LTR ERV1 1 327 -141 23 33 0 0 chr10 117337800 117337830 -22978935 + AT_rich Low_complexity Low_complexity 1 30 0 331 371 36 21 chr10 117337871 117338011 -22978754 + MIR3 SINE MIR 10 151 -57 219 260 0 0 chr10 117338022 117338072 -22978693 - L2 LINE L2 -3 3310 3261 21 0 0 0 chr10 117338705 117338726 -22978039 + AT_rich Low_complexity Low_complexity 1 21 0 239 300 123 7 chr10 117338851 117339002 -22977763 + MIR SINE MIR 40 206 -56 228 270 67 11 chr10 117339182 117339271 -22977494 + MLT1L LTR MaLR 150 243 -372 724 319 50 0 chr10 117339508 117339746 -22977019 + MIR SINE MIR 6 255 -7 22 70 0 0 chr10 117339746 117339789 -22976976 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr10 117339917 117339952 -22976813 + AT_rich Low_complexity Low_complexity 1 35 0 217 274 0 0 chr10 117339957 117340008 -22976757 + (TA)n Simple_repeat Simple_repeat 2 52 0 209 207 0 17 chr10 117340095 117340153 -22976612 + (TA)n Simple_repeat Simple_repeat 1 57 0 282 116 0 0 chr10 117340153 117340196 -22976569 + (TG)n Simple_repeat Simple_repeat 2 44 0 213 323 31 0 chr10 117340246 117340311 -22976454 + MIR SINE MIR 64 130 -78 900 246 44 9 chr10 117340528 117340756 -22976009 + MLT1J2 LTR MaLR 1 236 -214 185 308 0 19 chr10 117341998 117342050 -22974715 - L2 LINE L2 -4 3268 3218 1890 144 22 0 chr10 117342210 117342526 -22974239 + AluSx SINE Alu 1 322 0 211 323 25 123 chr10 117342805 117342986 -22973779 - L2 LINE L2 -54 3259 3113 1909 223 39 30 chr10 117342986 117343449 -22973316 + MLT1C LTR MaLR 1 467 0 211 323 25 123 chr10 117343449 117343543 -22973222 - L2 LINE L2 -200 3113 3011 210 37 0 0 chr10 117343751 117343778 -22972987 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1634 119 0 137 chr10 117345866 117346203 -22970562 - AluJb SINE Alu -21 291 1 526 239 124 10 chr10 117346557 117346758 -22970007 + LTR50 LTR ERVL 4 227 -568 1046 190 22 66 chr10 117346929 117347155 -22969610 + MER58A DNA MER1_type 1 216 -8 288 0 0 0 chr10 117347845 117347877 -22968888 + (TA)n Simple_repeat Simple_repeat 2 33 0 1063 220 5 0 chr10 117348541 117348727 -22968038 + MER5A DNA MER1_type 1 187 -2 1603 142 84 15 chr10 117348988 117349262 -22967503 + AluJb SINE Alu 3 295 -17 286 375 87 42 chr10 117349292 117349812 -22966953 - L2 LINE L2 -412 2902 2360 228 67 0 0 chr10 117351042 117351072 -22965693 + (CA)n Simple_repeat Simple_repeat 1 30 0 202 271 0 34 chr10 117351313 117351372 -22965393 + (TG)n Simple_repeat Simple_repeat 1 57 0 1928 151 14 3 chr10 117352091 117352383 -22964382 + AluSx SINE Alu 1 295 -17 622 290 49 11 chr10 117352431 117352614 -22964151 + MIR SINE MIR 12 201 -61 239 339 18 67 chr10 117352762 117352927 -22963838 + MIR SINE MIR 20 176 -86 204 125 0 0 chr10 117353070 117353102 -22963663 + (GGGGA)n Simple_repeat Simple_repeat 1 32 0 328 294 28 51 chr10 117353312 117353526 -22963239 + L1ME LINE L1 5614 5822 -299 589 313 78 4 chr10 117355177 117355407 -22961358 + MIR SINE MIR 14 260 -2 775 209 102 14 chr10 117355875 117356090 -22960675 - MIR SINE MIR 0 262 29 240 184 0 103 chr10 117356118 117356205 -22960560 - MIR SINE MIR -62 200 123 578 289 50 13 chr10 117356261 117356420 -22960345 - MER97a DNA MER1_type? -711 183 19 257 216 68 45 chr10 117356562 117356650 -22960115 + MER5B DNA MER1_type 7 96 -82 1782 165 0 26 chr10 117357595 117357904 -22958861 + AluJb SINE Alu 1 301 -11 468 333 33 11 chr10 117358061 117358241 -22958524 + MIR SINE MIR 9 192 -70 484 297 80 46 chr10 117358251 117358639 -22958126 + LTR33A LTR ERVL 2 436 -87 1048 249 52 4 chr10 117358921 117359170 -22957595 - MIR SINE MIR 0 262 2 392 219 99 46 chr10 117359567 117359718 -22957047 - MIR SINE MIR -6 256 98 585 253 77 101 chr10 117359911 117360208 -22956557 + MLT1E-int LTR MaLR 1081 1370 -1 621 283 85 27 chr10 117360210 117360468 -22956297 + MLT1E LTR MaLR 2 274 -319 198 277 0 46 chr10 117360616 117360681 -22956084 - L2 LINE L2 -8 3305 3244 22 0 0 0 chr10 117360780 117360802 -22955963 + AT_rich Low_complexity Low_complexity 1 22 0 317 215 49 0 chr10 117360824 117360968 -22955797 + (TA)n Simple_repeat Simple_repeat 1 151 0 3071 163 2 31 chr10 117361908 117362461 -22954304 + MER52-int LTR ERV1 4045 4581 -2510 627 237 15 0 chr10 117362564 117362699 -22954066 + MLT1F1 LTR MaLR 19 155 -412 * 2434 174 64 12 chr10 117362681 117363660 -22953105 + Tigger6a DNA MER2_type 16 1083 0 418 316 55 52 chr10 117363662 117363934 -22952831 - L1ME LINE L1 -5467 603 331 321 306 94 6 chr10 117364350 117364520 -22952245 - MIR SINE MIR -3 259 75 879 94 8 0 chr10 117364672 117364789 -22951976 - THE1B LTR MaLR 0 364 247 229 374 11 0 chr10 117364790 117364881 -22951884 + MIR3 SINE MIR 102 193 -15 266 231 0 0 chr10 117365219 117365271 -22951494 + Charlie1 DNA MER1_type 3 54 -2707 448 297 138 0 chr10 117365478 117365616 -22951149 + MER5A DNA MER1_type 10 166 -23 323 294 88 62 chr10 117365735 117365929 -22950836 - MIR SINE MIR -40 222 24 460 318 41 32 chr10 117366256 117366476 -22950289 + MIR SINE MIR 40 261 -1 23 0 0 0 chr10 117366608 117366631 -22950134 + AT_rich Low_complexity Low_complexity 1 23 0 205 245 71 41 chr10 117366742 117366850 -22949915 + MIR SINE MIR 36 146 -63 379 247 21 10 chr10 117367095 117367192 -22949573 + MER5A DNA MER1_type 91 188 -1 2669 101 31 6 chr10 117367543 117367898 -22948867 - THE1B LTR MaLR 0 364 1 5036 170 10 12 chr10 117368087 117368889 -22947876 - MER52-int LTR ERV1 -1764 5327 4528 493 266 70 86 chr10 117368995 117369455 -22947310 - L1M4 LINE L1 -4647 1997 1445 2315 86 3 7 chr10 117369455 117369756 -22947009 - AluSq SINE Alu -2 311 12 462 118 15 0 chr10 117371392 117371460 -22945305 + MSTA LTR MaLR 360 428 0 1755 102 16 0 chr10 117371460 117371714 -22945051 + MSTA-int LTR MaLR 1 258 -1393 4440 119 49 44 chr10 117371729 117372545 -22944220 + L1M4c LINE L1 1394 2213 -4171 352 143 18 0 chr10 117372549 117372605 -22944160 - Tigger7 DNA MER2_type -1 2490 2434 830 171 34 28 chr10 117372718 117372894 -22943871 + AluJb SINE Alu 120 296 -16 209 220 37 83 chr10 117374804 117374913 -22941852 - MER5A DNA MER1_type -68 121 18 2364 122 24 27 chr10 117375732 117376108 -22940657 - THE1C LTR MaLR 0 375 1 5850 112 4 7 chr10 117376108 117376923 -22939842 - THE1C-int LTR MaLR 0 1580 769 1065 229 81 21 chr10 117377023 117377307 -22939458 + MLT1E LTR MaLR 291 591 -2 400 295 98 49 chr10 117377407 117377651 -22939114 - MIR SINE MIR -6 256 1 3294 198 63 41 chr10 117378404 117378635 -22938130 - L1MD1 LINE L1 0 6502 6277 2550 153 69 5 chr10 117378635 117379072 -22937693 - MLT1C LTR MaLR -2 465 1 3294 198 63 41 chr10 117379072 117380141 -22936624 - L1MD1 LINE L1 -225 6277 5165 1154 207 54 32 chr10 117380149 117380429 -22936336 - L1MD1 LINE L1 -5442 967 682 593 189 213 6 chr10 117381233 117381397 -22935368 + MIR SINE MIR 34 231 -31 473 219 0 0 chr10 117381660 117381775 -22934990 + L1ME1 LINE L1 6067 6161 -5 308 306 28 0 chr10 117382171 117382279 -22934486 - MIR SINE MIR -111 151 41 2462 131 28 23 chr10 117383002 117383390 -22933375 - MLT1B LTR MaLR 0 390 1 1557 50 0 0 chr10 117383409 117383590 -22933175 + L1PA4 LINE L1 5972 6152 -3 374 272 125 22 chr10 117383630 117383766 -22932999 + LTR33A LTR ERVL 12 161 -362 819 257 55 0 chr10 117383838 117384056 -22932709 + LTR33A LTR ERVL 286 515 -8 23 0 0 0 chr10 117384152 117384175 -22932590 + AT_rich Low_complexity Low_complexity 1 23 0 563 206 8 30 chr10 117384274 117384405 -22932360 + MER69 DNA AcHobo 20 147 -1079 538 276 47 67 chr10 117384652 117384906 -22931859 + MIR SINE MIR 14 262 0 254 243 68 68 chr10 117385598 117385701 -22931064 - L1ME3A LINE L1 -103 6067 5965 565 246 87 33 chr10 117385889 117386223 -22930542 - L1ME LINE L1 -5164 906 555 1226 222 18 5 chr10 117386821 117387042 -22929723 - MER58A DNA MER1_type 0 224 1 394 282 24 16 chr10 117387315 117387439 -22929326 + MIR SINE MIR 70 194 -68 329 267 73 93 chr10 117387655 117387805 -22928960 + MIR3 SINE MIR 14 160 -48 216 303 0 56 chr10 117387964 117388053 -22928712 + MIR3 SINE MIR 122 205 -3 702 337 126 15 chr10 117388519 117388925 -22927840 + MLT1K LTR MaLR 134 584 -4 204 324 29 71 chr10 117388999 117389237 -22927528 + L2 LINE L2 2417 2644 -670 1558 183 30 24 chr10 117389318 117389482 -22927283 - AluJo SINE Alu -14 298 130 1691 131 0 0 chr10 117389482 117389718 -22927047 - AluSc SINE Alu -13 296 61 1558 183 30 24 chr10 117389718 117389848 -22926917 - AluJo SINE Alu -182 130 2 1178 250 58 15 chr10 117390441 117390769 -22925996 + L1ME1 LINE L1 38 379 -6017 2080 234 75 23 chr10 117390802 117391498 -22925267 + L1ME1 LINE L1 4727 5458 -757 8332 207 34 26 chr10 117391507 117394648 -22922117 + L1PA12 LINE L1 3 3980 -3604 1888 124 4 0 chr10 117394648 117394907 -22921858 + AluSp SINE Alu 40 299 -14 8332 207 34 26 chr10 117394907 117395070 -22921695 + L1PA12 LINE L1 3980 4140 -3444 3220 93 12 2 chr10 117395077 117395497 -22921268 + L1PA12 LINE L1 5745 6168 0 2722 224 47 25 chr10 117395501 117396265 -22920500 + L1ME1 LINE L1 5451 6231 -4 1137 241 154 45 chr10 117396296 117396744 -22920021 + MLT1H LTR MaLR 40 536 -13 1475 155 12 94 chr10 117397106 117397435 -22919330 + MLT1A1 LTR MaLR 3 304 -61 2033 132 4 0 chr10 117397435 117397716 -22919049 + AluSx SINE Alu 1 282 -30 255 61 0 0 chr10 117397717 117397750 -22919015 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 234 0 0 0 chr10 117397750 117397776 -22918989 + (CA)n Simple_repeat Simple_repeat 1 26 0 222 91 0 0 chr10 117397911 117397944 -22918821 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 201 39 0 0 chr10 117397944 117397970 -22918795 + (CA)n Simple_repeat Simple_repeat 1 26 0 398 134 104 0 chr10 117397979 117398046 -22918719 + MLT1A1 LTR MaLR 301 374 0 739 193 0 115 chr10 117398321 117398513 -22918252 - FAM SINE Alu -5 44 1 29 60 0 0 chr10 117398517 117398567 -22918198 + AT_rich Low_complexity Low_complexity 1 50 0 1879 161 0 31 chr10 117398925 117399242 -22917523 + AluJo SINE Alu 1 307 -5 180 0 0 0 chr10 117399934 117399954 -22916811 + (T)n Simple_repeat Simple_repeat 1 20 0 2887 10 0 0 chr10 117400525 117400834 -22915931 + AluYa5 SINE Alu 1 309 -2 185 316 18 18 chr10 117402322 117402379 -22914386 + L3b LINE CR1 1522 1578 -5 733 271 15 10 chr10 117402521 117402724 -22914041 + MLT1K LTR MaLR 382 585 -3 536 150 0 0 chr10 117403417 117403497 -22913268 + MADE1 DNA Mariner 1 80 0 4601 159 22 41 chr10 117404143 117405145 -22911620 + MER11C LTR ERVK 2 1071 0 3569 54 13 22 chr10 117405145 117405605 -22911160 - L1PA7 LINE L1 -32 6122 5667 480 86 86 0 chr10 117406324 117406394 -22910371 + MADE1 DNA Mariner 3 78 -2 1374 134 28 18 chr10 117406407 117406624 -22910141 + MER20 DNA MER1_type 1 219 0 376 274 29 0 chr10 117407490 117407592 -22909173 - MIR SINE MIR -108 154 50 226 257 43 0 chr10 117407646 117407716 -22909049 + L1ME4a LINE L1 5365 5437 -729 627 249 34 68 chr10 117407762 117407821 -22908944 + L1ME4a LINE L1 5542 5601 -520 1847 89 21 0 chr10 117407821 117408058 -22908707 + L1PA13 LINE L1 5911 6152 -11 627 249 34 68 chr10 117408058 117408323 -22908442 + L1ME4a LINE L1 5601 5855 -266 1058 241 14 0 chr10 117409011 117409231 -22907534 - MER58A DNA MER1_type 0 224 2 644 251 64 120 chr10 117409688 117409717 -22907048 + L2 LINE L2 2758 2787 -526 2761 204 70 10 chr10 117409717 117410315 -22906450 + MER92B LTR ERV1 3 636 0 644 251 64 120 chr10 117410315 117410847 -22905918 + L2 LINE L2 2787 3295 -18 225 309 168 0 chr10 117410986 117411135 -22905630 - MIR SINE MIR -11 251 78 542 307 117 24 chr10 117411682 117411922 -22904843 - MIR SINE MIR -2 260 3 2725 87 22 16 chr10 117412276 117412643 -22904122 - THE1C LTR MaLR -4 371 3 3161 153 13 23 chr10 117413093 117413617 -22903148 - LTR44 LTR ERV1 0 519 1 1250 209 37 26 chr10 117413674 117413942 -22902823 - MLT1F1 LTR MaLR 0 567 297 1071 72 24 6 chr10 117413948 117413990 -22902775 + (GAAA)n Simple_repeat Simple_repeat 1 41 -265 288 70 0 0 chr10 117413990 117414033 -22902732 + (CA)n Simple_repeat Simple_repeat 2 44 0 1071 72 24 6 chr10 117414033 117414083 -22902682 + (GAAA)n Simple_repeat Simple_repeat 41 306 0 1071 72 24 6 chr10 117414083 117414249 -22902516 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 517 313 20 10 chr10 117414334 117414532 -22902233 - MLT1F1 LTR MaLR -342 200 1 517 233 92 97 chr10 117414884 117415112 -22901653 - MLT1I LTR MaLR 0 409 183 555 312 32 40 chr10 117415338 117415591 -22901174 + MIR SINE MIR 2 252 -10 1226 175 17 17 chr10 117416351 117416591 -22900174 + L1MB8 LINE L1 5937 6176 -2 311 135 39 0 chr10 117416635 117416687 -22900078 + L1ME3A LINE L1 6112 6165 -5 222 62 0 0 chr10 117417360 117417392 -22899373 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2250 90 0 10 chr10 117417396 117417685 -22899080 - AluSx SINE Alu -26 286 1 647 276 29 12 chr10 117419357 117419527 -22897238 + MER5B DNA MER1_type 4 176 -2 1774 183 104 22 chr10 117420607 117420973 -22895792 - MSTD LTR MaLR 0 396 1 279 0 0 0 chr10 117421250 117421281 -22895484 + (A)n Simple_repeat Simple_repeat 1 31 0 274 267 53 13 chr10 117421983 117422058 -22894707 + L2 LINE L2 3190 3267 -5 209 265 255 0 chr10 117422203 117422301 -22894464 - L2 LINE L2 -6 3307 3185 212 329 24 12 chr10 117422367 117422449 -22894316 - L2 LINE L2 -430 2884 2802 723 305 60 48 chr10 117422452 117422865 -22893900 + L2 LINE L2 2896 3313 0 318 316 204 21 chr10 117423348 117423721 -22893044 - L2 LINE L2 -870 2444 2004 215 385 17 8 chr10 117423781 117423898 -22892867 - MIR SINE MIR -61 147 30 499 275 100 12 chr10 117424634 117424794 -22891971 + MIR3 SINE MIR 14 187 -21 258 351 54 0 chr10 117426320 117426431 -22890334 + L3 LINE CR1 670 786 -791 378 309 54 0 chr10 117427073 117427222 -22889543 + MIR3 SINE MIR 45 201 -7 872 214 0 7 chr10 117427458 117427612 -22889153 + FRAM SINE Alu 1 152 -24 5575 167 28 9 chr10 117427735 117429024 -22887741 - L1MA9 LINE L1 -12 6300 4984 3852 173 72 13 chr10 117429748 117430440 -22886325 - MER44D DNA MER2_type 0 605 1 254 298 36 24 chr10 117430634 117430718 -22886047 + MIR SINE MIR 34 118 -90 1012 222 60 105 chr10 117432212 117432680 -22884085 + LTR16A1 LTR ERVL 11 457 0 977 294 56 39 chr10 117433267 117433675 -22883090 + MLT1K LTR MaLR 3 417 -171 24 0 0 0 chr10 117433675 117433699 -22883066 + AT_rich Low_complexity Low_complexity 1 24 0 199 274 0 0 chr10 117433922 117433973 -22882792 - L2 LINE L2 -8 3305 3255 2198 115 0 34 chr10 117434927 117435250 -22881515 - AluSx SINE Alu 0 312 1 313 273 33 41 chr10 117436110 117436231 -22880534 - MER5A DNA MER1_type -35 154 35 390 265 39 55 chr10 117436373 117436478 -22880287 + MER5B DNA MER1_type 1 103 -75 1912 180 120 8 chr10 117436478 117436862 -22879903 - MSTA LTR MaLR 0 428 2 390 265 39 55 chr10 117436862 117436937 -22879828 + MER5B DNA MER1_type 103 178 0 297 209 0 122 chr10 117436956 117437071 -22879694 + MER5A DNA MER1_type 9 109 -80 916 217 0 5 chr10 117438347 117438536 -22878229 - MER5A DNA MER1_type -1 188 1 322 239 37 32 chr10 117438623 117438735 -22878030 - L1ME LINE L1 -650 5520 5406 237 297 0 0 chr10 117438991 117439055 -22877710 + GA-rich Low_complexity Low_complexity 3 66 0 437 281 10 62 chr10 117439719 117439911 -22876854 - MIR SINE MIR -58 204 23 324 248 129 0 chr10 117440397 117440498 -22876267 + L2 LINE L2 3200 3313 0 1795 253 65 27 chr10 117442645 117443223 -22873542 + MLT1G LTR MaLR 3 590 0 227 133 67 0 chr10 117443536 117443581 -22873184 + MIR SINE MIR 94 141 -67 376 271 85 0 chr10 117444327 117444445 -22872320 + L2 LINE L2 3145 3272 0 2365 104 7 0 chr10 117444456 117444765 -22872000 - AluY SINE Alu 0 311 1 304 179 39 39 chr10 117444859 117444937 -22871828 + MIR SINE MIR 99 176 -86 623 171 103 8 chr10 117445160 117445277 -22871488 - FLAM_A SINE Alu -5 128 1 246 262 148 25 chr10 117445317 117445439 -22871326 + LTR16C LTR ERVL 339 475 -16 1736 178 33 48 chr10 117445439 117445832 -22870933 + MLT1B LTR MaLR 1 387 -3 199 328 15 0 chr10 117445856 117445923 -22870842 + MIR SINE MIR 159 226 -36 438 200 8 58 chr10 117446166 117446286 -22870479 - MER3 DNA MER1_type -1 208 95 970 93 36 0 chr10 117446322 117446461 -22870304 + AluSc SINE Alu 166 309 0 272 297 65 22 chr10 117446719 117446857 -22869908 - L2 LINE L2 -1 3312 3169 1452 262 47 30 chr10 117447138 117447607 -22869158 - MER74B LTR ERVL -74 548 72 303 28 0 0 chr10 117447648 117447684 -22869081 + (CA)n Simple_repeat Simple_repeat 1 36 0 444 267 64 53 chr10 117447859 117448046 -22868719 - LTR16C LTR ERVL 0 491 303 261 224 40 40 chr10 117448425 117448501 -22868264 - L2 LINE L2 -50 3222 3147 2162 129 6 0 chr10 117449707 117450018 -22866747 + AluSq SINE Alu 1 313 0 674 240 152 99 chr10 117450137 117450828 -22865937 + LTR8A LTR ERV1 1 588 -15 247 296 128 17 chr10 117451022 117451194 -22865571 + L1M4 LINE L1 4135 4325 -1821 917 141 0 0 chr10 117451197 117451332 -22865433 + AluJo SINE Alu 1 135 -177 557 82 0 0 chr10 117451988 117452061 -22864704 - MADE1 DNA Mariner -2 78 6 234 250 62 62 chr10 117452517 117452613 -22864152 - L2 LINE L2 -13 3259 3164 476 296 19 0 chr10 117452836 117452995 -22863770 - MIR SINE MIR -21 241 80 283 330 10 0 chr10 117454479 117454582 -22862183 + MIR SINE MIR 81 184 -78 869 271 245 7 chr10 117454737 117455154 -22861611 + LTR33 LTR ERVL 6 521 0 827 234 166 25 chr10 117455154 117455474 -22861291 + MLT1K LTR MaLR 217 581 -7 238 273 0 0 chr10 117455671 117455726 -22861039 - MIR3 SINE MIR -54 154 100 2591 56 0 0 chr10 117456052 117456355 -22860410 - AluY SINE Alu -7 304 2 225 209 0 0 chr10 117456557 117456600 -22860165 + (TA)n Simple_repeat Simple_repeat 1 43 0 411 340 28 14 chr10 117456603 117456885 -22859880 + L1M4 LINE L1 3903 4188 -1958 212 315 70 7 chr10 117457075 117457218 -22859547 + MIR SINE MIR 101 252 -10 23 0 0 0 chr10 117457721 117457744 -22859021 + AT_rich Low_complexity Low_complexity 1 23 0 2216 107 13 0 chr10 117458079 117458400 -22858365 + AluSx SINE Alu 2 312 0 53 30 0 0 chr10 117458554 117458621 -22858144 + AT_rich Low_complexity Low_complexity 1 67 0 4689 160 33 8 chr10 117460268 117461035 -22855730 + MER54B LTR ERVL 2 787 -6 242 250 38 12 chr10 117512095 117512175 -22804590 - L2 LINE L2 -537 2777 2696 25 0 0 0 chr10 117512295 117512320 -22804445 + AT_rich Low_complexity Low_complexity 1 25 0 191 298 0 48 chr10 117512340 117512424 -22804341 - MIR3 SINE MIR -19 189 110 301 318 98 23 chr10 117512875 117513048 -22803717 - MLT1K LTR MaLR -272 316 131 236 271 0 17 chr10 117513705 117513764 -22803001 - MER30 DNA MER1_type 0 230 173 1108 120 109 0 chr10 117513945 117514120 -22802645 - MER30 DNA MER1_type -36 194 1 585 271 26 0 chr10 117514841 117514996 -22801769 + MER5A DNA MER1_type 8 166 -23 394 208 69 46 chr10 117515022 117515152 -22801613 - MER5B DNA MER1_type -45 133 1 389 291 81 83 chr10 117516655 117516709 -22800056 + L2 LINE L2 2827 2880 -392 2146 116 59 34 chr10 117516709 117517064 -22799701 + THE1B LTR MaLR 1 364 0 389 291 81 83 chr10 117517064 117517456 -22799309 + L2 LINE L2 2880 3272 0 4986 87 5 1 chr10 117518528 117519186 -22797579 - THE1B-int LTR MaLR -920 660 1 2142 141 73 12 chr10 117519186 117519527 -22797238 - THE1B LTR MaLR 0 364 3 883 163 6 62 chr10 117521301 117521479 -22795286 - MER50 LTR ERV1 0 734 567 2770 149 4 0 chr10 117521480 117521935 -22794830 + L1P LINE L1 1 457 -5689 241 234 0 52 chr10 117522011 117522088 -22794677 + CT-rich Low_complexity Low_complexity 2 74 0 608 250 134 9 chr10 117522773 117522997 -22793768 - MIR SINE MIR 0 262 11 1633 177 17 10 chr10 117523074 117523362 -22793403 + AluJo SINE Alu 13 302 -10 551 45 0 0 chr10 117524519 117524586 -22792179 - L1P LINE L1 -3604 2542 2476 2392 89 0 0 chr10 117524866 117525158 -22791607 - AluY SINE Alu -19 292 1 3462 131 40 30 chr10 117525224 117525820 -22790945 - MER7C DNA MER2_type 0 602 1 288 196 18 0 chr10 117526282 117526338 -22790427 + MIR SINE MIR 41 97 -165 459 250 74 46 chr10 117526353 117526569 -22790196 - MLT1J LTR MaLR -16 495 274 2226 126 0 3 chr10 117528262 117528571 -22788194 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr10 117529119 117529146 -22787619 + AT_rich Low_complexity Low_complexity 1 27 0 203 286 0 0 chr10 117529366 117529415 -22787350 - L2 LINE L2 -23 3290 3242 197 200 217 0 chr10 117529543 117529603 -22787162 - MIR SINE MIR -10 252 180 16752 25 0 7 chr10 117529749 117532228 -22784537 - L1PA3 LINE L1 -320 5835 3366 227 342 0 0 chr10 117532889 117532968 -22783797 + MIR SINE MIR 44 122 -86 194 322 26 61 chr10 117534243 117534358 -22782407 - L2 LINE L2 -26 3287 3177 21440 32 2 1 chr10 117535067 117537619 -22779146 + L1P LINE L1 1674 4226 -1920 1127 278 59 9 chr10 117538291 117538629 -22778136 + LTR16A LTR ERVL 84 438 -12 490 246 23 31 chr10 117539842 117539972 -22776793 - MER94 DNA DNA 0 134 6 924 276 71 27 chr10 117540854 117541292 -22775473 - L1MC4a LINE L1 -1760 6048 5592 1037 145 75 0 chr10 117541300 117541500 -22775265 - L1MA7 LINE L1 -3 6288 6074 965 138 0 19 chr10 117541500 117541660 -22775105 + L1MA7 LINE L1 5730 5886 -405 362 276 90 8 chr10 117541661 117541795 -22774970 - L1MC4a LINE L1 -2214 5594 5450 295 263 13 122 chr10 117542366 117542522 -22774243 + MER5A DNA MER1_type 50 188 -1 4764 216 23 9 chr10 117543153 117544200 -22772565 + Charlie1a DNA MER1_type 110 1171 -284 314 311 102 6 chr10 117544686 117544853 -22771912 + L1ME LINE L1 5610 5792 -329 500 258 33 44 chr10 117545774 117545883 -22770882 + MLT1I LTR MaLR 28 136 -273 2850 106 0 14 chr10 117545883 117546252 -22770513 - THE1B LTR MaLR 0 364 1 500 258 33 44 chr10 117546252 117546324 -22770441 + MLT1I LTR MaLR 136 207 -202 1021 192 101 26 chr10 117546458 117546794 -22769971 - MSTD LTR MaLR -5 391 1 314 346 16 31 chr10 117546896 117546996 -22769769 + MIR SINE MIR 30 129 -133 1023 218 27 23 chr10 117546996 117547216 -22769549 - MER58A DNA MER1_type 0 224 4 314 346 16 31 chr10 117547216 117547242 -22769523 + MIR SINE MIR 129 154 -108 682 252 85 94 chr10 117547249 117547766 -22768999 - MLT1H1 LTR MaLR -2 553 67 1324 313 49 12 chr10 117547931 117548616 -22768149 + L2 LINE L2 2585 3299 -14 270 207 0 0 chr10 117548624 117548682 -22768083 + GA-rich Low_complexity Low_complexity 3 60 0 183 42 0 0 chr10 117549254 117549278 -22767487 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr10 117549353 117549381 -22767384 + AT_rich Low_complexity Low_complexity 1 28 0 2176 126 3 0 chr10 117549751 117550061 -22766704 + AluSx SINE Alu 1 311 -1 2034 230 105 24 chr10 117551705 117552210 -22764555 - MLT2F LTR ERVL -109 554 9 5827 44 0 1 chr10 117552264 117552993 -22763772 + L1PA5 LINE L1 2758 3485 -2661 10856 51 1 2 chr10 117553093 117555049 -22761716 + L1PA5 LINE L1 4050 6004 -150 867 279 95 53 chr10 117556119 117556570 -22760195 - MLT1L LTR MaLR -2 613 144 201 138 0 0 chr10 117556702 117556731 -22760034 + (CA)n Simple_repeat Simple_repeat 2 30 0 257 295 238 8 chr10 117556827 117556949 -22759816 - MIR SINE MIR -110 152 3 23 0 0 0 chr10 117557695 117557718 -22759047 + AT_rich Low_complexity Low_complexity 1 23 0 581 163 11 11 chr10 117557718 117557810 -22758955 - FLAM_C SINE Alu -21 122 31 3474 104 34 24 chr10 117557993 117558493 -22758272 + MER1A DNA MER1_type 1 505 -24 464 286 74 26 chr10 117558742 117558931 -22757834 - MIR SINE MIR -30 232 35 218 230 0 81 chr10 117558960 117559034 -22757731 + MIR SINE MIR 125 192 -70 624 194 37 50 chr10 117609121 117609196 -22707569 + L1MC3 LINE L1 6694 6768 -1017 1756 106 0 4 chr10 117609196 117609451 -22707314 - AluSc SINE Alu 0 309 56 624 194 37 50 chr10 117609451 117609575 -22707190 + L1MC3 LINE L1 6768 6851 -934 * 6705 191 66 43 chr10 117609573 117610782 -22705983 + L1MC3 LINE L1 5923 7182 -603 1533 132 100 0 chr10 117610782 117611062 -22705703 - AluJb SINE Alu -4 308 1 6705 191 66 43 chr10 117611062 117611529 -22705236 + L1MC3 LINE L1 7182 7637 -148 2017 115 11 0 chr10 117611623 117611909 -22704856 + AluSx SINE Alu 6 294 -18 831 196 37 6 chr10 117612209 117612372 -22704393 - MER5A DNA MER1_type -18 171 4 862 202 81 6 chr10 117612376 117612549 -22704216 + MER5A DNA MER1_type 1 186 -3 470 220 40 0 chr10 117613209 117613309 -22703456 + MER5B DNA MER1_type 19 122 -56 248 330 18 36 chr10 117613565 117613677 -22703088 - L2 LINE L2 -297 3016 2907 596 183 16 24 chr10 117613682 117613808 -22702957 - L1MB5 LINE L1 -117 6057 5933 1318 231 123 51 chr10 117613870 117614341 -22702424 + MLT1D LTR MaLR 1 505 0 599 248 32 6 chr10 117614343 117614500 -22702265 - L2 LINE L2 -475 2839 2679 25 65 0 0 chr10 117614566 117614612 -22702153 + AT_rich Low_complexity Low_complexity 1 46 0 26 82 0 0 chr10 117614640 117614701 -22702064 + AT_rich Low_complexity Low_complexity 1 61 0 296 298 38 23 chr10 117615081 117615192 -22701573 + L1ME4a LINE L1 5959 6067 -54 1214 153 7 84 chr10 117615192 117615244 -22701521 - L1MB5 LINE L1 0 6174 6120 1693 133 20 31 chr10 117615244 117615373 -22701392 + AluSx SINE Alu 1 130 -182 2023 120 3 0 chr10 117615373 117615696 -22701069 + AluSp SINE Alu 2 313 0 1693 133 20 31 chr10 117615696 117615860 -22700905 + AluSx SINE Alu 130 291 -21 1214 153 7 84 chr10 117615860 117616081 -22700684 - L1MB5 LINE L1 -54 6120 5922 296 298 38 23 chr10 117616081 117616100 -22700665 + L1ME4a LINE L1 6067 6091 -30 2076 116 0 7 chr10 117616198 117616501 -22700264 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr10 117616502 117616532 -22700233 + AT_rich Low_complexity Low_complexity 1 30 0 1193 143 147 45 chr10 117616543 117616809 -22699956 - AluJo SINE Alu -5 297 5 349 257 35 62 chr10 117617054 117617167 -22699598 - MER5B DNA MER1_type 0 178 80 2138 106 10 0 chr10 117618627 117618929 -22697836 + AluSg SINE Alu 1 305 -5 2779 159 43 72 chr10 117618930 117619011 -22697754 + LTR9 LTR ERV1 10 92 -520 1344 203 47 88 chr10 117619011 117619479 -22697286 + LTR7 LTR ERV1 2 450 0 2779 159 43 72 chr10 117619479 117620018 -22696747 + LTR9 LTR ERV1 92 612 0 2399 77 0 0 chr10 117620125 117620425 -22696340 + AluSg SINE Alu 1 300 -10 1817 147 3 19 chr10 117620433 117620747 -22696018 + AluSq SINE Alu 5 313 0 3506 131 6 17 chr10 117621449 117621967 -22694798 + MER41E LTR ERV1 1 512 0 397 261 153 40 chr10 117622083 117622259 -22694506 + MIR SINE MIR 3 198 -64 1217 181 81 3 chr10 117622286 117622584 -22694181 - MER33 DNA MER1_type -3 321 1 649 240 168 0 chr10 117622687 117622866 -22693899 - MIR SINE MIR -2 260 52 230 325 61 35 chr10 117622996 117623110 -22693655 + L2 LINE L2 3145 3261 -11 324 295 9 36 chr10 117624170 117624282 -22692483 - MIR3 SINE MIR -30 178 70 732 268 47 20 chr10 117624862 117625116 -22691649 + MIR SINE MIR 2 262 0 637 260 106 5 chr10 117626340 117626548 -22690217 - MIR SINE MIR -1 261 33 482 290 135 0 chr10 117627282 117627482 -22689283 - MIR SINE MIR -35 227 1 494 269 57 0 chr10 117627512 117627653 -22689112 + MIR SINE MIR 11 159 -103 213 292 73 21 chr10 117627684 117627780 -22688985 + MIR SINE MIR 150 250 -12 1037 179 61 0 chr10 117628853 117629049 -22687716 - MER3 DNA MER1_type 0 209 2 431 229 164 50 chr10 117629066 117629089 -22687676 + MER5A DNA MER1_type 33 52 -137 2321 69 0 0 chr10 117629089 117629380 -22687385 - AluY SINE Alu -20 291 1 431 229 164 50 chr10 117629380 117629496 -22687269 + MER5A DNA MER1_type 52 188 -1 296 153 321 2 chr10 117629834 117629917 -22686848 - MIR SINE MIR -65 143 39 325 282 0 12 chr10 117629996 117630081 -22686684 + MIR SINE MIR 16 99 -163 2172 98 0 19 chr10 117630703 117631019 -22685746 + AluSq SINE Alu 1 310 -3 375 297 110 7 chr10 117631078 117631223 -22685542 - MIR3 SINE MIR -12 196 37 912 137 46 119 chr10 117631938 117632157 -22684608 + MER20 DNA MER1_type 1 203 -16 1988 117 8 10 chr10 117632830 117633120 -22683645 + AluSx SINE Alu 3 286 -26 237 255 235 0 chr10 117634142 117634240 -22682525 + Charlie8 DNA MER1_type 107 227 -2190 243 268 149 64 chr10 117634561 117634796 -22681969 - MIR SINE MIR -6 256 2 817 182 0 0 chr10 117635577 117635709 -22681056 + FLAM_C SINE Alu 1 132 -1 261 258 174 15 chr10 117635710 117635776 -22680989 - MIR SINE MIR -6 256 202 922 228 60 12 chr10 117635776 117636026 -22680739 + MIR SINE MIR 1 262 0 261 258 174 15 chr10 117636026 117636091 -22680674 - MIR SINE MIR -60 202 104 419 317 25 57 chr10 117637005 117637138 -22679627 + MIR SINE MIR 20 140 -122 2439 78 0 0 chr10 117637138 117637431 -22679334 + AluSg SINE Alu 1 293 -17 419 317 25 57 chr10 117637431 117637551 -22679214 + MIR SINE MIR 140 262 0 193 196 65 0 chr10 117637554 117637600 -22679165 - L2 LINE L2 -7 3265 3217 1629 182 17 30 chr10 117638035 117638331 -22678434 + AluJo SINE Alu 1 292 -20 552 312 10 29 chr10 117638348 117638553 -22678212 - MIR SINE MIR -57 205 5 244 169 0 31 chr10 117639305 117639370 -22677395 + (TA)n Simple_repeat Simple_repeat 1 63 0 2829 154 86 99 chr10 117640218 117641302 -22675463 + LTR12 LTR ERV1 5 691 -23 313 305 35 84 chr10 117641424 117641627 -22675138 + MIR SINE MIR 36 228 -34 513 279 43 31 chr10 117641920 117642108 -22674657 + MIR SINE MIR 15 203 -59 2006 155 3 13 chr10 117642807 117643117 -22673648 - AluSx SINE Alu -5 307 1 332 176 40 54 chr10 117643145 117643219 -22673546 - L2 LINE L2 -18 3295 3223 238 281 0 16 chr10 117643292 117643356 -22673409 - L2 LINE L2 -222 3091 3029 232 287 20 40 chr10 117643585 117643686 -22673079 - L2 LINE L2 -293 2979 2881 835 272 29 8 chr10 117643732 117643978 -22672787 - MIR SINE MIR 0 262 12 589 245 191 15 chr10 117644781 117644985 -22671780 - MIR SINE MIR -10 252 13 2123 113 3 16 chr10 117645666 117646010 -22670755 - AluY SINE Alu 0 311 1 2012 134 35 3 chr10 117646272 117646562 -22670203 + AluSx SINE Alu 7 305 -7 193 216 118 0 chr10 117647400 117647451 -22669314 + MIR SINE MIR 90 146 -116 676 308 4 39 chr10 117647461 117647695 -22669070 + MIR SINE MIR 29 254 -8 204 289 0 0 chr10 117647698 117647750 -22669015 + (ATG)n Simple_repeat Simple_repeat 2 53 0 537 303 51 6 chr10 117648151 117648329 -22668436 + MER5A DNA MER1_type 4 189 0 328 275 140 29 chr10 117648620 117648791 -22667974 + MIR SINE MIR 59 248 -14 391 300 158 13 chr10 117649139 117649442 -22667323 + L1ME4a LINE L1 5482 5828 -293 324 183 14 42 chr10 117649442 117649513 -22667252 + L1MC4 LINE L1 6636 6704 -1338 * 339 301 0 21 chr10 117649451 117649544 -22667221 - L1MC4 LINE L1 -1336 6706 6616 333 296 23 0 chr10 117649733 117649821 -22666944 - L1MC4 LINE L1 -1339 6703 6614 309 295 42 11 chr10 117649738 117649833 -22666932 + L1MC4 LINE L1 6613 6710 -1332 * 21 0 0 0 chr10 117650053 117650074 -22666691 + AT_rich Low_complexity Low_complexity 1 21 0 246 267 0 0 chr10 117651034 117651094 -22665671 + MIR SINE MIR 90 149 -113 2257 109 10 0 chr10 117652134 117652436 -22664329 + AluSx SINE Alu 1 305 -7 344 281 180 7 chr10 117652955 117653094 -22663671 + MIR SINE MIR 92 254 -8 840 128 0 0 chr10 117653434 117653559 -22663206 - AluSx SINE Alu -6 304 180 610 161 0 0 chr10 117653559 117653652 -22663113 - AluSx SINE Alu -218 94 2 974 197 118 14 chr10 117653673 117653962 -22662803 - MER33 DNA MER1_type 0 324 6 2025 149 7 0 chr10 117654189 117654491 -22662274 + AluSx SINE Alu 1 304 -8 216 253 13 114 chr10 117655693 117655772 -22660993 + MIR SINE MIR 24 94 -168 249 284 156 0 chr10 117655947 117656088 -22660677 + MIR SINE MIR 99 261 -1 2259 97 0 33 chr10 117656795 117657095 -22659670 + AluSx SINE Alu 1 290 -22 305 274 133 9 chr10 117657325 117657438 -22659327 + MIR SINE MIR 65 191 -71 2042 129 0 41 chr10 117657643 117657962 -22658803 + AluSx SINE Alu 1 307 0 293 355 16 16 chr10 117658497 117658621 -22658144 + MIR3 SINE MIR 43 166 -42 905 132 103 29 chr10 117658946 117659120 -22657645 + MER5A DNA MER1_type 3 189 0 2041 143 0 13 chr10 117659338 117659638 -22657127 + AluSx SINE Alu 1 296 -16 1516 208 21 0 chr10 117659652 117659941 -22656824 + AluJb SINE Alu 1 295 -17 889 171 57 6 chr10 117660020 117660178 -22656587 + AluJb SINE Alu 141 306 -6 2088 139 3 3 chr10 117660179 117660480 -22656285 + AluSx SINE Alu 1 301 -11 1990 162 101 50 chr10 117660612 117661155 -22655610 + pTR5 LTR ERV1 743 1313 -1125 * 5460 122 246 77 chr10 117661135 117662585 -22654180 + pTR5 LTR ERV1 743 2438 0 4394 122 131 27 chr10 117662588 117663685 -22653080 + pTR5 LTR ERV1 65 2401 -37 223 327 75 19 chr10 117663765 117663872 -22652893 + MIR3 SINE MIR 73 185 -23 1716 94 156 51 chr10 117663963 117664238 -22652527 + AluSg SINE Alu 1 304 -6 1886 55 0 0 chr10 117664279 117664497 -22652268 - AluY SINE Alu -8 303 86 323 385 55 15 chr10 117665693 117665893 -22650872 - MIR SINE MIR -28 234 27 2096 134 20 0 chr10 117668264 117668570 -22648195 + AluSx SINE Alu 1 312 0 2278 104 6 25 chr10 117669293 117669611 -22647154 - AluSx SINE Alu 0 312 1 2515 85 0 0 chr10 117670187 117670493 -22646272 + AluSq SINE Alu 1 306 -7 290 296 134 41 chr10 117670649 117670821 -22645944 - MIR SINE MIR -13 249 62 1612 154 39 59 chr10 117671828 117672134 -22644631 - AluJb SINE Alu -12 300 1 240 302 94 28 chr10 117672332 117672438 -22644327 + L2 LINE L2 3155 3267 -5 2306 90 17 10 chr10 117672450 117672749 -22644016 + AluSx SINE Alu 1 301 -11 1649 102 0 0 chr10 117672751 117672957 -22643808 + AluSg SINE Alu 1 206 -104 215 255 0 21 chr10 117673158 117673205 -22643560 + L2 LINE L2 3246 3291 -22 1516 166 0 105 chr10 117674053 117674397 -22642368 + AluJo SINE Alu 3 310 -2 363 275 114 62 chr10 117674920 117674977 -22641788 + L2 LINE L2 3021 3074 -239 2214 108 27 3 chr10 117674977 117675274 -22641491 + AluSx SINE Alu 3 306 -6 363 275 114 62 chr10 117675274 117675489 -22641276 + L2 LINE L2 3074 3307 -6 1706 175 0 31 chr10 117675554 117675880 -22640885 - AluJb SINE Alu 0 317 1 359 297 61 20 chr10 117675929 117676157 -22640608 - L1MC4a LINE L1 -181 5940 5700 657 260 115 10 chr10 117676194 117676402 -22640363 - MIR SINE MIR -29 233 4 356 272 131 42 chr10 117676585 117676776 -22639989 - L1MC4a LINE L1 -2346 5462 5255 22 0 0 0 chr10 117676848 117676870 -22639895 + AT_rich Low_complexity Low_complexity 1 22 0 257 271 23 45 chr10 117676979 117677112 -22639653 - L1P LINE L1 -1111 5035 4906 2485 99 0 0 chr10 117677245 117677557 -22639208 - AluSx SINE Alu 0 312 1 516 291 138 60 chr10 117677566 117677997 -22638768 - L1MC4a LINE L1 -1390 4756 4264 2277 116 0 3 chr10 117678992 117679303 -22637462 - AluSx SINE Alu -2 310 1 603 338 90 28 chr10 117679621 117680009 -22636756 - L2 LINE L2 -1 3312 2901 223 362 52 9 chr10 117680853 117680969 -22635796 + MIR3 SINE MIR 79 199 -9 881 137 0 0 chr10 117681012 117681136 -22635629 + FLAM_C SINE Alu 3 126 -7 3978 180 65 9 chr10 117681163 117681708 -22635057 + L1MB5 LINE L1 5175 5813 -361 483 18 0 0 chr10 117681708 117681764 -22635001 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 3978 180 65 9 chr10 117681764 117682142 -22634623 + L1MB5 LINE L1 5813 6168 -6 2013 112 39 3 chr10 117682160 117682446 -22634319 + AluSx SINE Alu 1 296 -16 266 274 113 54 chr10 117682762 117682948 -22633817 + Charlie8 DNA MER1_type 44 240 -2177 917 145 0 0 chr10 117683257 117683388 -22633377 + AluJb SINE Alu 5 135 -177 1875 163 0 10 chr10 117683388 117683523 -22633242 + AluJb SINE Alu 1 136 -176 2474 92 0 0 chr10 117683523 117683829 -22632936 + AluY SINE Alu 1 306 -5 1130 177 0 38 chr10 117683772 117683981 -22632784 + AluJo SINE Alu 85 285 -27 1875 163 0 10 chr10 117683829 117683981 -22632784 + AluJb SINE Alu 136 285 -27 355 291 149 0 chr10 117684895 117685036 -22631729 + MIR SINE MIR 82 243 -19 240 111 0 0 chr10 117685865 117685901 -22630864 + (TG)n Simple_repeat Simple_repeat 2 37 0 8193 21 2 0 chr10 117686287 117687540 -22629225 + L1PA4 LINE L1 4897 6155 0 1220 103 23 0 chr10 117687548 117687722 -22629043 - LTR26 LTR ERV1 -421 182 5 2439 190 86 6 chr10 117687747 117688215 -22628550 + MLT1D LTR MaLR 1 505 0 374 259 37 46 chr10 117688400 117688508 -22628257 + MIR SINE MIR 8 114 -148 1454 221 16 44 chr10 117688516 117688917 -22627848 + MLT2C1 LTR ERVL 1 653 -10 367 211 149 9 chr10 117688921 117689035 -22627730 + MIR SINE MIR 133 262 0 420 238 43 12 chr10 117689353 117689477 -22627288 + MLT1H LTR MaLR 431 595 0 843 236 69 103 chr10 117689535 117690188 -22626577 + L1ME4a LINE L1 5485 6115 -6 604 273 32 23 chr10 117690521 117690741 -22626024 + L2 LINE L2 2812 3033 -280 4870 157 39 1 chr10 117690745 117691597 -22625168 + L1MB1 LINE L1 5278 6161 -28 346 313 45 45 chr10 117692231 117692429 -22624336 + MIR3 SINE MIR 8 205 -3 225 308 15 0 chr10 117692661 117692726 -22624039 + L2 LINE L2 3195 3260 -12 485 211 128 35 chr10 117692956 117693128 -22623637 - MIR SINE MIR -59 203 20 208 342 33 8 chr10 117693340 117693460 -22623305 - MIR SINE MIR -137 125 3 275 346 0 13 chr10 117694438 117694516 -22622249 + MIR SINE MIR 29 105 -103 599 233 67 31 chr10 117694908 117695121 -22621644 + MIR SINE MIR 17 233 -29 240 274 0 0 chr10 117695154 117695205 -22621560 + MIR3 SINE MIR 110 160 -48 1953 138 3 31 chr10 117695307 117695626 -22621139 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr10 117695939 117695967 -22620798 + AT_rich Low_complexity Low_complexity 1 28 0 482 249 143 38 chr10 117696580 117696728 -22620037 - L1ME4a LINE L1 -15 6106 5922 315 0 0 0 chr10 117696728 117696763 -22620002 + (TG)n Simple_repeat Simple_repeat 2 36 0 482 249 143 38 chr10 117696763 117696851 -22619914 - L1ME4a LINE L1 -199 5922 5845 1540 159 87 0 chr10 117696891 117697143 -22619622 - AluSx SINE Alu -38 274 1 746 263 0 11 chr10 117697369 117697544 -22619221 - MIR SINE MIR -45 217 45 410 319 152 10 chr10 117697702 117697906 -22618859 + MIR SINE MIR 11 243 -19 370 316 139 0 chr10 117698637 117698795 -22617970 - Charlie8 DNA MER1_type -2237 180 1 184 332 111 53 chr10 117698925 117699133 -22617632 - L2 LINE L2 -404 2910 2691 305 261 65 22 chr10 117700451 117700589 -22616176 + L1ME4a LINE L1 5976 6119 -2 2491 60 0 7 chr10 117701090 117701388 -22615377 + AluY SINE Alu 1 296 -15 289 313 9 43 chr10 117701395 117701510 -22615255 - MIR SINE MIR -79 129 19 386 305 85 7 chr10 117702696 117702837 -22613928 - L2 LINE L2 -6 3266 3115 6151 208 43 18 chr10 117702921 117704339 -22612426 + Charlie1a DNA MER1_type 1 1454 -1 354 277 110 26 chr10 117704638 117704793 -22611972 + MIR SINE MIR 89 256 -6 221 158 26 0 chr10 117705253 117705291 -22611474 + MIR3 SINE MIR 151 189 -19 280 279 164 8 chr10 117706619 117706741 -22610024 + MIR SINE MIR 29 169 -93 859 286 172 12 chr10 117706809 117707152 -22609613 + MLT1J2 LTR MaLR 16 413 -37 237 132 0 0 chr10 117707155 117707193 -22609572 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 2357 85 3 0 chr10 117708497 117708791 -22607974 - AluSq SINE Alu -18 295 1 188 269 65 54 chr10 117708791 117708884 -22607881 + L2 LINE L2 3009 3102 -211 190 261 22 0 chr10 117708970 117709016 -22607749 + L2 LINE L2 3224 3270 -2 184 262 66 33 chr10 117709048 117709109 -22607656 + L3b LINE CR1 1442 1504 -79 630 277 103 13 chr10 117710571 117710795 -22605970 - MIR SINE MIR -14 248 5 434 289 72 12 chr10 117710953 117711119 -22605646 - MIR SINE MIR -59 203 28 2207 111 0 19 chr10 117711371 117711686 -22605079 + AluSx SINE Alu 1 309 -3 4005 36 0 0 chr10 117712090 117712536 -22604229 + L1PA7 LINE L1 5708 6153 -1 24 0 0 0 chr10 117712581 117712605 -22604160 + AT_rich Low_complexity Low_complexity 1 24 0 210 260 0 0 chr10 117712891 117712941 -22603824 - MIR SINE MIR -119 143 94 218 346 56 28 chr10 117715626 117715733 -22601032 - MIR SINE MIR -64 144 35 237 214 0 0 chr10 117715969 117716011 -22600754 + MIR3 SINE MIR 161 202 -6 2233 129 0 6 chr10 117717038 117717349 -22599416 + AluSq SINE Alu 1 309 -4 268 128 0 0 chr10 117717370 117717409 -22599356 - MIR3 SINE MIR -52 156 118 210 250 28 42 chr10 117717864 117717936 -22598829 - MIR3 SINE MIR -12 196 126 376 214 121 36 chr10 117718022 117718162 -22598603 - MIR3 SINE MIR -15 193 42 616 184 32 8 chr10 117718199 117718324 -22598441 + MER69A DNA AcHobo 49 176 -1 24 32 0 0 chr10 117718728 117718759 -22598006 + AT_rich Low_complexity Low_complexity 1 31 0 939 247 25 25 chr10 117719334 117719569 -22597196 + MIR SINE MIR 14 248 -14 819 309 257 7 chr10 117719775 117720351 -22596414 - L3 LINE CR1 -3 1574 855 1625 179 4 4 chr10 117720389 117720651 -22596114 + Tigger7 DNA MER2_type 6 267 -466 672 163 0 0 chr10 117720651 117720749 -22596016 + Tigger7 DNA MER2_type 2390 2487 0 2401 85 50 0 chr10 117721395 117721713 -22595052 - L1PA10 LINE L1 -3 6165 5832 1308 92 0 62 chr10 117721714 117721964 -22594801 + L1PA10 LINE L1 5607 5813 -347 256 218 97 81 chr10 117722117 117722241 -22594524 - MIR SINE MIR -65 143 18 2578 65 0 0 chr10 117722255 117722563 -22594202 + AluY SINE Alu 1 308 -3 1091 217 71 90 chr10 117722792 117722836 -22593929 + L2 LINE L2 2754 2797 -516 1958 143 7 29 chr10 117722836 117723144 -22593621 - AluSx SINE Alu -11 301 1 1091 217 71 90 chr10 117723144 117723648 -22593117 + L2 LINE L2 2797 3294 -19 588 206 37 15 chr10 117724630 117724766 -22591999 - MIR SINE MIR -21 241 103 231 167 0 0 chr10 117724779 117724821 -22591944 + (TG)n Simple_repeat Simple_repeat 1 42 0 727 271 26 31 chr10 117725685 117725914 -22590851 - MIR SINE MIR -5 257 30 197 291 134 52 chr10 117726277 117726411 -22590354 - MER5A DNA MER1_type 0 189 45 822 176 116 25 chr10 117727519 117727718 -22589047 - MER20 DNA MER1_type -1 218 2 374 268 39 20 chr10 117727783 117727936 -22588829 - L1ME4a LINE L1 -11 6110 5955 23 0 0 0 chr10 117727976 117727999 -22588766 + AT_rich Low_complexity Low_complexity 1 23 0 232 233 78 108 chr10 117728205 117728334 -22588431 + MIR SINE MIR 68 192 -70 238 289 26 13 chr10 117729147 117729223 -22587542 + MER5A DNA MER1_type 111 187 -2 2316 83 3 0 chr10 117730278 117730746 -22586019 + AluSq SINE Alu 1 469 0 180 0 0 0 chr10 117730746 117730766 -22585999 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 296 360 32 0 chr10 117730798 117730923 -22585842 - L2 LINE L2 -10 3262 3134 1461 100 20 88 chr10 117730990 117731240 -22585525 + MER46A DNA MER2_type 4 236 0 1219 201 49 73 chr10 117731389 117731538 -22585227 + MER58B DNA MER1_type 6 157 -2263 1989 113 57 0 chr10 117731538 117731821 -22584944 + AluSq SINE Alu 1 299 -14 1219 201 49 73 chr10 117731821 117732015 -22584750 + MER58B DNA MER1_type 157 341 0 1638 148 122 0 chr10 117732130 117732408 -22584357 - AluSx SINE Alu 0 312 1 530 273 65 26 chr10 117732866 117733075 -22583690 + MIR SINE MIR 47 262 0 236 268 50 86 chr10 117733043 117733302 -22583463 - L2 LINE L2 -11 3261 2962 * 2527 78 0 10 chr10 117735547 117735854 -22580911 - AluY SINE Alu -7 304 1 186 333 0 0 chr10 117736310 117736439 -22580326 + (TG)n Simple_repeat Simple_repeat 2 130 0 696 83 0 0 chr10 117736852 117736948 -22579817 + (TGGA)n Simple_repeat Simple_repeat 4 99 0 345 328 116 0 chr10 117738959 117739148 -22577617 - MIR SINE MIR 0 262 52 214 205 0 0 chr10 117739322 117739361 -22577404 + A-rich Low_complexity Low_complexity 1 39 0 2098 93 65 0 chr10 117740154 117740432 -22576333 + AluSq SINE Alu 2 297 -16 1139 222 10 0 chr10 117740707 117740914 -22575851 + MER58A DNA MER1_type 9 217 -7 2018 122 35 3 chr10 117740914 117741037 -22575728 + AluSx SINE Alu 1 119 -193 477 0 0 0 chr10 117741037 117741090 -22575675 + (CA)n Simple_repeat Simple_repeat 2 54 0 2018 122 35 3 chr10 117741090 117741253 -22575512 + AluSx SINE Alu 119 296 -16 539 225 155 7 chr10 117741963 117742105 -22574660 - MER45A DNA AcHobo -4 174 12 2026 128 17 3 chr10 117742199 117742497 -22574268 - AluSq SINE Alu -11 302 1 187 103 51 0 chr10 117743276 117743315 -22573450 + (TA)n Simple_repeat Simple_repeat 2 42 0 335 255 25 81 chr10 117746049 117746210 -22570555 + MIR SINE MIR 103 254 -8 197 275 75 25 chr10 117746336 117746416 -22570349 - MIR3 SINE MIR -30 178 95 464 174 0 10 chr10 117746488 117746586 -22570179 + L1MA7 LINE L1 6185 6281 -10 2114 132 0 10 chr10 117746596 117746900 -22569865 - AluSx SINE Alu -11 301 1 30 45 0 0 chr10 117746907 117746951 -22569814 + AT_rich Low_complexity Low_complexity 1 44 0 1991 149 0 0 chr10 117747009 117747298 -22569467 + AluSx SINE Alu 1 289 -23 344 375 13 0 chr10 117747525 117747677 -22569088 + MER117 DNA MER1_type 4 157 -40 194 317 33 0 chr10 117747743 117747803 -22568962 + L2 LINE L2 3197 3258 -14 960 263 5 9 chr10 117748704 117748928 -22567837 - MER58A DNA MER1_type 0 224 2 189 0 0 0 chr10 117749082 117749103 -22567662 + (CA)n Simple_repeat Simple_repeat 1 21 0 2356 105 0 3 chr10 117749559 117749865 -22566900 - AluSq SINE Alu -8 305 1 189 306 24 12 chr10 117749923 117750008 -22566757 + L2 LINE L2 2914 2999 -273 212 255 117 32 chr10 117750208 117750302 -22566463 + L2 LINE L2 3156 3257 -15 250 191 48 16 chr10 117750385 117750448 -22566317 + L1ME4a LINE L1 5988 6052 -69 2933 6 0 0 chr10 117750449 117750760 -22566005 - AluYa5 SINE Alu 0 311 1 2356 101 0 0 chr10 117750792 117751100 -22565665 - AluSx SINE Alu -4 308 1 288 276 55 55 chr10 117751545 117751672 -22565093 + MIR SINE MIR 1 127 -135 256 318 144 6 chr10 117752147 117752320 -22564445 - MIR SINE MIR -4 258 62 1315 182 9 124 chr10 117752700 117752878 -22563887 - AluJo SINE Alu -20 292 168 2386 100 0 3 chr10 117752878 117753188 -22563577 - AluSg1 SINE Alu 0 309 1 1315 182 9 124 chr10 117753188 117753339 -22563426 - AluJo SINE Alu -144 168 1 1295 100 6 11 chr10 117753538 117753718 -22563047 + AluSg/x SINE Alu 125 303 -9 202 293 15 120 chr10 117753785 117753918 -22562847 + MER5A DNA MER1_type 44 162 -27 1136 41 35 12 chr10 117754230 117754241 -22562524 + (TTTC)n Simple_repeat Simple_repeat 1 184 0 1136 41 35 12 chr10 117754241 117754410 -22562355 + (TTTC)n Simple_repeat Simple_repeat 1 173 0 1845 154 0 7 chr10 117754469 117754749 -22562016 - AluJb SINE Alu -34 278 1 223 227 0 0 chr10 117754873 117754917 -22561848 + MIR SINE MIR 219 262 0 2242 110 7 0 chr10 117755766 117756067 -22560698 - AluSp SINE Alu -10 303 1 772 146 54 0 chr10 117757829 117757959 -22558806 + Tigger2 DNA MER2_type 2518 2654 -64 475 168 116 11 chr10 117758125 117758220 -22558545 - Tigger2 DNA MER2_type -10 2708 2604 32958 42 3 6 chr10 117758341 117762332 -22554433 - L1P LINE L1 -2164 3982 4 2483 123 35 81 chr10 117762332 117762608 -22554157 + LTR26 LTR ERV1 168 416 -187 5082 32 3 0 chr10 117762608 117763195 -22553570 - L1PA3 LINE L1 0 6155 5567 2483 123 35 81 chr10 117763195 117763375 -22553390 + LTR26 LTR ERV1 416 603 0 2953 80 0 3 chr10 117763441 117763817 -22552948 - THE1C LTR MaLR 0 375 1 250 330 38 19 chr10 117763859 117763965 -22552800 + MIR SINE MIR 16 123 -85 470 209 139 13 chr10 117764419 117764577 -22552188 - MER5B DNA MER1_type 0 178 1 1850 109 0 4 chr10 117764756 117765003 -22551762 + AluSq SINE Alu 11 256 -57 296 290 29 14 chr10 117765073 117765211 -22551554 - MIR SINE MIR -7 255 116 1638 210 40 8 chr10 117765978 117766350 -22550415 - MLT1C LTR MaLR -50 417 34 267 299 205 0 chr10 117766497 117766624 -22550141 - MIR SINE MIR -75 187 35 2031 115 0 73 chr10 117766686 117767000 -22549765 + AluSg SINE Alu 1 291 -19 234 286 126 8 chr10 117767053 117767172 -22549593 - L2 LINE L2 -4 3268 3136 518 274 132 0 chr10 117767393 117767597 -22549168 - MER112 DNA MER1_type -12 248 18 1670 215 3 0 chr10 117768047 117768358 -22548407 + AluJb SINE Alu 1 312 0 272 356 40 18 chr10 117768363 117768585 -22548180 + LTR16C LTR ERVL 257 483 -8 445 157 0 0 chr10 117768884 117768954 -22547811 + AluJ/FLAM SINE Alu 5 74 -238 2131 99 0 62 chr10 117769054 117769334 -22547431 - THE1A LTR MaLR -52 303 43 2307 99 0 0 chr10 117769334 117769641 -22547124 - AluSc SINE Alu 0 307 1 2131 99 0 62 chr10 117769641 117769682 -22547083 - THE1A LTR MaLR -312 43 1 1075 63 0 0 chr10 117769682 117769809 -22546956 - THE1C LTR MaLR -248 127 1 1700 169 0 0 chr10 117770160 117770455 -22546310 + AluJb SINE Alu 25 319 0 186 43 0 0 chr10 117770710 117770733 -22546032 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 632 291 87 9 chr10 117772055 117772285 -22544480 + MIR SINE MIR 12 259 -3 303 28 0 0 chr10 117773732 117773768 -22542997 + (CA)n Simple_repeat Simple_repeat 2 37 0 402 193 96 54 chr10 117774811 117774984 -22541781 + MER104 DNA Tc2 36 167 -13 2244 113 3 7 chr10 117775565 117775874 -22540891 + AluSx SINE Alu 2 309 -3 451 272 41 18 chr10 117776009 117776178 -22540587 - MIR SINE MIR -33 229 57 326 190 58 74 chr10 117776204 117776325 -22540440 - L1MC5 LINE L1 -727 7234 7116 574 211 52 100 chr10 117776329 117776470 -22540295 - L1MC5 LINE L1 -907 7054 6933 2044 108 4 11 chr10 117776470 117776748 -22540017 - AluSx SINE Alu -6 306 31 574 211 52 100 chr10 117776748 117776895 -22539870 - L1MC5 LINE L1 -1028 6933 6780 287 261 11 23 chr10 117777147 117777235 -22539530 - AluSq/x SINE Alu -186 117 31 413 260 47 27 chr10 117777274 117777424 -22539341 - L1MC4 LINE L1 -1072 6970 6818 2022 51 0 0 chr10 117777799 117778036 -22538729 - AluY SINE Alu -3 308 72 2707 49 0 0 chr10 117778798 117779105 -22537660 + AluY SINE Alu 1 307 -4 285 282 14 0 chr10 117779106 117779177 -22537588 + MER5A DNA MER1_type 68 139 -50 189 0 0 0 chr10 117779811 117779832 -22536933 + (A)n Simple_repeat Simple_repeat 1 21 0 2277 111 0 0 chr10 117779835 117780132 -22536633 + AluSx SINE Alu 1 297 -15 336 224 64 83 chr10 117780267 117780423 -22536342 - MIR SINE MIR 0 262 110 2590 133 20 47 chr10 117780832 117780913 -22535852 - Tigger2a DNA MER2_type -2275 433 351 2489 63 3 3 chr10 117780913 117781216 -22535549 + AluY SINE Alu 1 303 -8 2590 133 20 47 chr10 117781216 117781579 -22535186 - Tigger2a DNA MER2_type -2357 351 1 306 291 126 52 chr10 117781656 117781715 -22535050 - L1MC4 LINE L1 -2156 5652 5599 243 0 0 0 chr10 117781715 117781742 -22535023 + (TG)n Simple_repeat Simple_repeat 2 28 0 306 291 126 52 chr10 117781742 117781912 -22534853 - L1MC4 LINE L1 -2209 5599 5406 1312 170 13 8 chr10 117782048 117782283 -22534482 - MER46A DNA MER2_type 0 236 1 781 285 14 0 chr10 117782932 117783153 -22533612 + MER58A DNA MER1_type 1 224 0 2406 98 0 13 chr10 117783317 117783632 -22533133 - AluSx SINE Alu -1 311 1 2137 95 3 14 chr10 117783753 117784068 -22532697 - AluSx SINE Alu 0 316 5 1967 95 20 0 chr10 117785229 117785482 -22531283 + AluSx SINE Alu 44 301 -11 2701 52 0 0 chr10 117785518 117785827 -22530938 + AluY SINE Alu 1 309 -2 225 0 0 0 chr10 117785827 117785852 -22530913 + (TA)n Simple_repeat Simple_repeat 2 26 0 237 358 0 25 chr10 117785852 117785933 -22530832 + MIR SINE MIR 31 109 -99 697 202 0 0 chr10 117785980 117786099 -22530666 - FLAM_C SINE Alu -19 124 6 752 193 0 0 chr10 117786451 117786570 -22530195 + FLAM_C SINE Alu 1 119 -24 180 0 0 0 chr10 117786570 117786590 -22530175 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 117788193 117788221 -22528544 + AT_rich Low_complexity Low_complexity 1 28 0 640 238 24 37 chr10 117791070 117791122 -22525643 - MER5B DNA MER1_type -5 173 122 2159 98 0 3 chr10 117791122 117791409 -22525356 + AluY SINE Alu 26 311 0 640 238 24 37 chr10 117791409 117791520 -22525245 - MER5B DNA MER1_type -56 122 12 405 316 57 38 chr10 117791836 117792045 -22524720 + L2 LINE L2 2824 3036 -277 304 140 0 0 chr10 117792365 117792422 -22524343 - MER52A LTR ERV1 0 1755 1699 * 640 200 112 16 chr10 117792420 117792692 -22524073 - MER52A LTR ERV1 -1191 564 203 2329 116 0 0 chr10 117793919 117794221 -22522544 - AluSx SINE Alu -10 302 1 624 266 110 25 chr10 117794420 117794657 -22522108 + MIR SINE MIR 6 262 0 813 218 10 20 chr10 117795378 117795575 -22521190 + MER3 DNA MER1_type 15 209 0 206 197 49 49 chr10 117797674 117797735 -22519030 + (CATATA)n Simple_repeat Simple_repeat 4 64 0 424 330 122 17 chr10 117798556 117798786 -22517979 - L2 LINE L2 -194 3078 2825 2229 113 0 3 chr10 117798801 117799101 -22517664 + AluSx SINE Alu 2 300 -12 4003 197 114 35 chr10 117799158 117800301 -22516464 + Charlie1a DNA MER1_type 1 1233 -222 252 235 275 40 chr10 117801035 117801184 -22515581 - MIR SINE MIR -66 196 13 497 151 0 12 chr10 117801725 117801834 -22514931 + AluSg/x SINE Alu 209 309 0 316 250 97 0 chr10 117801851 117801923 -22514842 + L2 LINE L2 3194 3272 0 2392 104 0 0 chr10 117801958 117802267 -22514498 + AluSg1 SINE Alu 1 309 0 663 176 0 0 chr10 117802488 117802596 -22514169 + MIR SINE MIR 151 258 -4 23 33 0 0 chr10 117802607 117802637 -22514128 + AT_rich Low_complexity Low_complexity 1 30 0 239 217 0 52 chr10 117802645 117802720 -22514045 + MIR SINE MIR 66 137 -71 233 351 0 30 chr10 117802735 117802866 -22513899 + MIR SINE MIR 66 192 -70 2112 105 3 7 chr10 117803433 117803752 -22513013 - AluSg SINE Alu 0 310 1 558 230 32 0 chr10 117804043 117804169 -22512596 + Charlie8 DNA MER1_type 24 153 -2264 272 307 34 51 chr10 117806799 117806975 -22509790 + L2 LINE L2 2866 3038 -234 442 262 189 0 chr10 117807129 117807251 -22509514 - MER5A DNA MER1_type 0 189 45 180 0 0 0 chr10 117808288 117808308 -22508457 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 306 318 85 0 chr10 117808567 117808696 -22508069 - MIR3 SINE MIR -34 174 35 353 248 60 34 chr10 117810264 117810381 -22506384 + MIR SINE MIR 20 139 -123 738 88 0 0 chr10 117810562 117810664 -22506101 + AluSp/q SINE Alu 203 304 -9 274 266 73 32 chr10 117810666 117810790 -22505975 + MIR SINE MIR 84 212 -50 218 358 0 15 chr10 117810978 117811045 -22505720 + L2 LINE L2 3122 3187 -85 2237 98 10 7 chr10 117812079 117812384 -22504381 + AluSp SINE Alu 1 306 -7 1444 143 40 8 chr10 117813881 117814133 -22502632 - AluJb SINE Alu -52 260 1 521 306 87 29 chr10 117815045 117815287 -22501478 + MIR SINE MIR 5 260 -2 250 178 0 0 chr10 117815796 117815841 -22500924 + Charlie5 DNA MER1_type 26 70 -2542 * 454 124 0 174 chr10 117815838 117816016 -22500749 + Charlie5 DNA MER1_type 2429 2575 -37 219 173 37 12 chr10 117816136 117816217 -22500548 + G-rich Low_complexity Low_complexity 1 83 0 285 240 30 10 chr10 117816243 117816343 -22500422 + GA-rich Low_complexity Low_complexity 1 102 0 2268 102 3 0 chr10 117816853 117817148 -22499617 + AluSc SINE Alu 1 296 -13 6432 166 19 26 chr10 117817308 117818595 -22498170 - L1MC3 LINE L1 0 7785 6508 1624 162 0 26 chr10 117818916 117819182 -22497583 + AluJo SINE Alu 40 298 -14 388 337 65 10 chr10 117819329 117819528 -22497237 + MIR SINE MIR 1 210 -52 637 240 34 11 chr10 117820153 117820332 -22496433 - MIR SINE MIR -3 259 77 6184 45 1 1 chr10 117820335 117821777 -22494988 - L1PA5 LINE L1 -126 6028 4587 1523 153 122 0 chr10 117821777 117822032 -22494733 - AluSq SINE Alu -27 286 1 675 329 94 7 chr10 117822184 117822614 -22494151 - L2 LINE L2 -240 3073 2606 23 33 0 0 chr10 117822970 117823000 -22493765 + AT_rich Low_complexity Low_complexity 1 30 0 537 231 191 14 chr10 117823127 117823274 -22493491 + MER5A DNA MER1_type 9 181 -8 186 208 0 0 chr10 117823350 117823398 -22493367 + (TG)n Simple_repeat Simple_repeat 2 49 0 339 317 0 0 chr10 117823512 117823657 -22493108 + (TG)n Simple_repeat Simple_repeat 1 145 0 501 175 0 0 chr10 117824251 117824354 -22492411 + CT-rich Low_complexity Low_complexity 4 106 0 228 318 68 61 chr10 117824664 117824796 -22491969 - L2 LINE L2 0 3272 3140 2146 129 3 7 chr10 117824800 117825110 -22491655 + AluSx SINE Alu 1 309 -3 238 255 10 39 chr10 117825605 117825707 -22491058 + LTR67 LTR ERVL 457 555 -2 597 294 118 43 chr10 117826250 117826834 -22489931 - L2 LINE L2 -1003 2311 1684 25 0 0 0 chr10 117827291 117827316 -22489449 + AT_rich Low_complexity Low_complexity 1 25 0 2304 109 0 3 chr10 117827316 117827627 -22489138 - AluSg SINE Alu 0 310 1 213 302 40 80 chr10 117828547 117828707 -22488058 - MIR SINE MIR -19 189 32 23 54 0 0 chr10 117829109 117829146 -22487619 + AT_rich Low_complexity Low_complexity 1 37 0 212 389 9 0 chr10 117829496 117829604 -22487161 - MIR SINE MIR -3 259 151 949 262 48 39 chr10 117829604 117830092 -22486673 - LTR40c LTR ERVL 0 462 1 377 362 7 13 chr10 117830092 117830244 -22486521 - MIR SINE MIR -107 155 5 1787 179 10 3 chr10 117830375 117830677 -22486088 - AluSx SINE Alu -8 304 1 1021 106 0 0 chr10 117830679 117830811 -22485954 - AluSq/x SINE Alu -180 132 1 2193 96 0 0 chr10 117831558 117831886 -22484879 - AluSx SINE Alu 0 328 1 742 309 63 5 chr10 117832000 117832223 -22484542 - MIR SINE MIR -21 241 6 1960 126 3 14 chr10 117832649 117832959 -22483806 - AluSx SINE Alu 0 307 1 186 220 100 0 chr10 117832991 117833041 -22483724 + L2 LINE L2 3217 3271 -1 3240 127 13 24 chr10 117834000 117834551 -22482214 + L1MB2 LINE L1 5625 6169 -2 22 0 0 0 chr10 117835072 117835094 -22481671 + AT_rich Low_complexity Low_complexity 1 22 0 2023 166 38 0 chr10 117835407 117835780 -22480985 - MLT1B LTR MaLR -1 389 3 1408 119 50 0 chr10 117836026 117836245 -22480520 + MER30 DNA MER1_type 1 230 0 490 217 49 84 chr10 117836484 117836687 -22480078 - L2 LINE L2 -5 3308 3113 392 261 76 25 chr10 117836750 117836907 -22479858 - L2 LINE L2 -449 2865 2701 1096 183 0 54 chr10 117837905 117838146 -22478619 - MER106A DNA MER1_type -8 228 1 637 325 48 21 chr10 117838417 117838835 -22477930 - L1MEc LINE L1 -5931 465 37 376 246 60 15 chr10 117838949 117839083 -22477682 - LTR48 LTR ERV1 -40 747 608 916 172 47 170 chr10 117839120 117839256 -22477509 - LTR49 LTR ERV1 -255 340 189 2000 105 19 54 chr10 117839256 117839571 -22477194 + AluSx SINE Alu 2 305 -7 916 172 47 170 chr10 117839571 117839846 -22476919 - LTR49 LTR ERV1 -406 189 1 189 0 0 0 chr10 117840028 117840049 -22476716 + (T)n Simple_repeat Simple_repeat 1 21 0 203 313 88 0 chr10 117840125 117840205 -22476560 - MIR3 SINE MIR -41 167 81 243 239 80 0 chr10 117841791 117841879 -22474886 - L1ME4a LINE L1 -6 6115 6021 2376 86 0 10 chr10 117841976 117842279 -22474486 - AluSc SINE Alu -6 303 4 302 273 198 8 chr10 117842301 117842543 -22474222 - L1ME4a LINE L1 -248 5873 5586 266 215 31 0 chr10 117842657 117842722 -22474043 - MIR SINE MIR -48 214 148 2192 67 42 14 chr10 117842940 117843224 -22473541 - AluY SINE Alu -18 293 2 1884 167 0 3 chr10 117843323 117843629 -22473136 - AluJo SINE Alu -7 305 1 324 286 39 45 chr10 117847129 117847283 -22469482 + MIR SINE MIR 87 239 -23 228 93 0 74 chr10 117847576 117847630 -22469135 + (TTATA)n Simple_repeat Simple_repeat 4 53 0 2480 69 0 0 chr10 117847759 117848063 -22468702 + AluSc SINE Alu 1 304 -5 2591 180 99 28 chr10 117848135 117848803 -22467962 + LTR48 LTR ERV1 26 740 -47 260 273 0 0 chr10 117849383 117849438 -22467327 + (TG)n Simple_repeat Simple_repeat 2 56 0 244 311 126 8 chr10 117849456 117849575 -22467190 - L2 LINE L2 -223 3049 2917 614 246 47 23 chr10 117849644 117849815 -22466950 - MER5B DNA MER1_type -3 175 1 22 0 0 0 chr10 117850005 117850027 -22466738 + AT_rich Low_complexity Low_complexity 1 22 0 1119 171 23 18 chr10 117852404 117852621 -22464144 - MER20 DNA MER1_type 0 219 2 478 327 62 6 chr10 117852980 117853142 -22463623 + MIR3 SINE MIR 3 173 -35 2410 70 6 10 chr10 117853871 117854184 -22462581 + AluSq SINE Alu 1 312 -1 462 257 19 52 chr10 117855076 117855254 -22461511 + MIR SINE MIR 4 173 -65 1910 155 0 0 chr10 117856005 117856296 -22460469 - AluSx SINE Alu -21 291 1 379 176 10 108 chr10 117857841 117857892 -22458873 + MIR3 SINE MIR 109 147 -61 661 227 21 52 chr10 117857892 117858086 -22458679 - MER5A DNA MER1_type 0 189 2 379 176 10 108 chr10 117858086 117858136 -22458629 + MIR3 SINE MIR 147 200 -8 22 0 0 0 chr10 117859482 117859504 -22457261 + AT_rich Low_complexity Low_complexity 1 22 0 672 289 46 16 chr10 117860146 117860340 -22456425 + MIR3 SINE MIR 2 201 -7 1494 182 19 16 chr10 117860356 117860664 -22456101 - MER33 DNA MER1_type 0 324 16 914 171 28 17 chr10 117860778 117860954 -22455811 - MER5B DNA MER1_type 0 178 1 1966 120 48 3 chr10 117861380 117861671 -22455094 + AluSc SINE Alu 1 304 -5 542 260 57 41 chr10 117861671 117861917 -22454848 - L1MB7 LINE L1 -16 6870 6621 4112 224 100 21 chr10 117861920 117863327 -22453438 - L1MB7 LINE L1 -1555 5293 3775 251 246 35 0 chr10 117863352 117863409 -22453356 + CT-rich Low_complexity Low_complexity 3 61 0 2030 105 0 18 chr10 117863409 117863686 -22453079 - AluSx SINE Alu -40 272 1 216 0 0 0 chr10 117864107 117864131 -22452634 + (T)n Simple_repeat Simple_repeat 1 24 0 232 257 62 18 chr10 117864157 117864270 -22452495 - L1MC4 LINE L1 0 8042 7925 714 290 70 103 chr10 117864312 117864950 -22451815 - L2 LINE L2 -837 2477 1861 605 83 28 56 chr10 117864986 117865094 -22451671 + AluJb SINE Alu 1 105 -207 213 234 0 0 chr10 117865100 117865147 -22451618 + T-rich Low_complexity Low_complexity 4 50 0 308 266 140 89 chr10 117865297 117865646 -22451119 - L1MB7 LINE L1 -5941 908 542 804 91 9 0 chr10 117865768 117865878 -22450887 + AluSg/x SINE Alu 184 294 -18 2221 112 0 0 chr10 117866331 117866626 -22450139 + AluSx SINE Alu 1 295 -17 813 225 37 37 chr10 117866664 117866882 -22449883 + MIR SINE MIR 45 262 0 234 333 62 0 chr10 117867532 117867613 -22449152 + MIR3 SINE MIR 122 207 -1 22 0 0 0 chr10 117867830 117867852 -22448913 + AT_rich Low_complexity Low_complexity 1 22 0 561 300 135 74 chr10 117868485 117869188 -22447577 + L2 LINE L2 1864 2609 -705 2139 101 19 13 chr10 117869450 117869757 -22447008 + AluSc SINE Alu 1 309 0 440 257 170 9 chr10 117869767 117869985 -22446780 + MER102b DNA MER1_type 88 340 -1 289 318 137 75 chr10 117870052 117870477 -22446288 + L2 LINE L2 2821 3271 -1 21 0 0 0 chr10 117870572 117870593 -22446172 + AT_rich Low_complexity Low_complexity 1 21 0 1931 159 0 19 chr10 117871320 117871629 -22445136 - AluJb SINE Alu -9 303 1 2074 168 49 0 chr10 117872285 117872695 -22444070 - L1MA4 LINE L1 -2 6298 5869 1049 270 111 64 chr10 117873489 117874222 -22442543 - L1MC4a LINE L1 -1689 6914 6148 555 292 37 16 chr10 117874611 117874854 -22441911 - L1MC4a LINE L1 -1822 5119 4872 1133 163 0 0 chr10 117874973 117875139 -22441626 - AluJb SINE Alu -16 296 131 939 157 6 12 chr10 117875261 117875325 -22441440 + Tigger7 DNA MER2_type 2326 2389 -102 1663 154 122 6 chr10 117875325 117875637 -22441128 - MER7A DNA MER2_type 0 346 1 939 157 6 12 chr10 117875637 117875738 -22441027 + Tigger7 DNA MER2_type 2389 2490 -1 767 291 128 27 chr10 117875745 117876222 -22440543 - L1MC4a LINE L1 -4308 2814 2290 565 285 77 29 chr10 117877122 117877396 -22439369 - L1MC4a LINE L1 -6118 305 19 267 328 109 16 chr10 117877858 117877986 -22438779 - MIR SINE MIR -70 192 53 201 325 36 12 chr10 117878554 117878637 -22438128 - MIR SINE MIR -177 85 1 413 314 109 14 chr10 117878897 117879107 -22437658 + L3b LINE CR1 1113 1342 -241 195 239 0 22 chr10 117879239 117879285 -22437480 + L3 LINE CR1 1528 1572 -5 1414 206 14 10 chr10 117879650 117879935 -22436830 + AluJo SINE Alu 3 289 -18 207 0 0 0 chr10 117879935 117879958 -22436807 + (CCA)n Simple_repeat Simple_repeat 3 25 0 353 261 27 0 chr10 117880386 117880497 -22436268 - L1MC4 LINE L1 0 8042 7929 11441 175 29 7 chr10 117880510 117880541 -22436224 - L1MA4A LINE L1 -24 6279 6250 2193 88 20 7 chr10 117880541 117880837 -22435928 - AluSc SINE Alu -9 300 1 11441 175 29 7 chr10 117880837 117883998 -22432767 - L1MA4A LINE L1 -53 6250 2942 23 92 0 0 chr10 117884302 117884367 -22432398 + AT_rich Low_complexity Low_complexity 1 65 0 25 31 0 0 chr10 117884656 117884688 -22432077 + AT_rich Low_complexity Low_complexity 1 32 0 512 285 166 48 chr10 117886226 117886721 -22430044 - L2 LINE L2 -798 2516 1964 784 157 79 16 chr10 117886725 117886929 -22429836 + L1MC3 LINE L1 6914 7097 -688 250 254 0 15 chr10 117886929 117886996 -22429769 + MLT1F1 LTR MaLR 35 100 -467 2585 148 51 2 chr10 117886996 117887450 -22429315 + L1MC3 LINE L1 7178 7653 -132 357 186 0 0 chr10 117887622 117887692 -22429073 + (TA)n Simple_repeat Simple_repeat 1 70 0 210 291 31 55 chr10 117887723 117887850 -22428915 - L2 LINE L2 -1616 1698 1575 217 344 93 26 chr10 117888658 117888809 -22427956 + MIR3 SINE MIR 2 162 -46 243 0 0 0 chr10 117889644 117889671 -22427094 + (TG)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr10 117889670 117889696 -22427069 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 26 30 0 0 chr10 117889887 117889920 -22426845 + AT_rich Low_complexity Low_complexity 1 33 0 264 314 57 29 chr10 117890333 117890473 -22426292 - L1ME LINE L1 -486 5635 5492 428 216 78 10 chr10 117890551 117890653 -22426112 - MIR SINE MIR -72 190 82 201 254 0 34 chr10 117894474 117894533 -22422232 + MIR SINE MIR 17 73 -135 553 169 275 6 chr10 117894617 117894777 -22421988 + MER105 DNA DNA 1 203 -1 230 244 0 0 chr10 117895437 117895482 -22421283 + (CA)n Simple_repeat Simple_repeat 1 45 0 333 47 0 0 chr10 117896719 117896762 -22420003 + (TAA)n Simple_repeat Simple_repeat 2 44 0 369 0 0 0 chr10 117900086 117900127 -22416638 + (CA)n Simple_repeat Simple_repeat 1 41 0 189 175 0 0 chr10 117900501 117900541 -22416224 + A-rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr10 117904109 117904131 -22412634 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 117905590 117905621 -22411144 + AT_rich Low_complexity Low_complexity 1 31 0 277 224 0 61 chr10 117906259 117906357 -22410408 - L1MC4 LINE L1 -1337 6705 6614 456 299 126 0 chr10 117908630 117908804 -22407961 + MIR SINE MIR 11 206 -56 22 0 0 0 chr10 117908834 117908856 -22407909 + AT_rich Low_complexity Low_complexity 1 22 0 387 289 26 46 chr10 117910299 117910451 -22406314 + MIR SINE MIR 68 216 -46 189 107 0 0 chr10 117910618 117910646 -22406119 + (AATAG)n Simple_repeat Simple_repeat 3 30 0 518 179 0 60 chr10 117911274 117911408 -22405357 + FLAM_C SINE Alu 1 126 -17 1727 172 3 14 chr10 117911996 117912287 -22404478 + AluJb SINE Alu 1 288 -24 2184 96 0 4 chr10 117912294 117912605 -22404160 + AluSx SINE Alu 3 312 0 216 156 44 0 chr10 117912830 117912875 -22403890 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 201 306 0 0 chr10 117913917 117913979 -22402786 + CT-rich Low_complexity Low_complexity 1 62 0 180 162 108 0 chr10 117913998 117914035 -22402730 - L2 LINE L2 -9 3304 3264 201 271 47 24 chr10 117914271 117914356 -22402409 - L2 LINE L2 -1 3312 3226 21 0 0 0 chr10 117915596 117915617 -22401148 + AT_rich Low_complexity Low_complexity 1 21 0 2399 62 0 3 chr10 117915959 117916267 -22400498 + AluY SINE Alu 1 307 -4 587 280 110 30 chr10 117918213 117918449 -22398316 + MIR SINE MIR 2 256 -6 674 296 156 36 chr10 117918455 117918893 -22397872 - MLT1J2 LTR MaLR 0 450 5 1542 160 51 3 chr10 117919274 117919567 -22397198 + L1MC3 LINE L1 7479 7785 0 27 29 0 0 chr10 117919648 117919682 -22397083 + AT_rich Low_complexity Low_complexity 1 34 0 460 280 169 5 chr10 117925335 117925542 -22391223 + L2 LINE L2 2985 3225 -88 2429 60 0 7 chr10 117925595 117925894 -22390871 - AluSc SINE Alu -12 297 1 24 0 0 0 chr10 117926065 117926089 -22390676 + AT_rich Low_complexity Low_complexity 1 24 0 29 60 0 0 chr10 117930423 117930473 -22386292 + AT_rich Low_complexity Low_complexity 1 50 0 28 0 0 0 chr10 117931012 117931040 -22385725 + AT_rich Low_complexity Low_complexity 1 28 0 1763 157 7 0 chr10 117932054 117932340 -22384425 - AluJb SINE Alu -24 288 1 2230 80 0 11 chr10 117933249 117933535 -22383230 + AluSq SINE Alu 13 295 -18 1962 137 3 0 chr10 117933885 117934178 -22382587 + AluSx SINE Alu 1 294 -18 451 245 31 0 chr10 117934298 117934396 -22382369 - MIR SINE MIR -71 191 91 323 375 0 31 chr10 117934724 117934884 -22381881 + MER5A DNA MER1_type 35 189 0 21 0 0 0 chr10 117935601 117935622 -22381143 + AT_rich Low_complexity Low_complexity 1 21 0 521 190 141 0 chr10 117935876 117935997 -22380768 - MIR SINE MIR -1 261 124 417 272 85 47 chr10 117936011 117936217 -22380548 - MIR SINE MIR -6 256 35 3975 161 21 12 chr10 117936440 117937165 -22379600 + L1PA16 LINE L1 5433 6163 -3 435 208 146 15 chr10 117937166 117937296 -22379469 + MIR SINE MIR 11 157 -105 2543 42 0 3 chr10 117937569 117937876 -22378889 + AluY SINE Alu 1 306 -5 252 191 0 0 chr10 117938845 117938892 -22377873 + MLT1K LTR MaLR 519 565 -23 184 267 44 0 chr10 117939390 117939435 -22377330 - MER5C DNA MER1_type -276 48 2 408 295 42 20 chr10 117939498 117939681 -22377084 + MIR SINE MIR 16 209 -53 400 276 41 16 chr10 117939956 117940079 -22376686 - MIR3 SINE MIR -37 171 46 412 268 106 0 chr10 117940083 117940206 -22376559 + L2 LINE L2 3176 3311 -2 2472 61 0 0 chr10 117941022 117941332 -22375433 - AluY SINE Alu -1 310 1 231 268 28 14 chr10 117941389 117941460 -22375305 - L2 LINE L2 0 3272 3201 540 287 33 37 chr10 117941797 117942041 -22374724 + MER112 DNA MER1_type 1 243 -17 673 143 192 44 chr10 117942129 117942311 -22374454 - MLT1A2 LTR MaLR -165 209 1 22 56 0 0 chr10 117942758 117942794 -22373971 + AT_rich Low_complexity Low_complexity 1 36 0 309 252 45 36 chr10 117942905 117943016 -22373749 + MIR SINE MIR 80 191 -71 313 355 77 64 chr10 117943076 117943609 -22373156 - L2 LINE L2 -575 2739 2200 1971 214 133 9 chr10 117943802 117944432 -22372333 + HsTC2a DNA Tc2 1 708 -36 848 141 0 15 chr10 117944432 117944567 -22372198 + FLAM_C SINE Alu 1 133 0 432 278 65 17 chr10 117946049 117946447 -22370318 + LTR33 LTR ERVL 52 510 -11 491 261 43 37 chr10 117946456 117946617 -22370148 + MIR SINE MIR 88 249 -13 224 29 0 29 chr10 117946618 117946652 -22370113 + (ATG)n Simple_repeat Simple_repeat 1 33 0 1392 223 47 11 chr10 117947027 117947386 -22369379 - MLT1A2 LTR MaLR 0 374 3 316 227 0 0 chr10 117947391 117947466 -22369299 - MLT1A2-int LTR MaLR -4 1731 1657 21 36 0 0 chr10 117947798 117947826 -22368939 + AT_rich Low_complexity Low_complexity 1 28 0 461 309 46 6 chr10 117949667 117949842 -22366923 - MIR SINE MIR -17 245 64 195 42 0 0 chr10 117950672 117950696 -22366069 + (T)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr10 117954031 117954053 -22362712 + (T)n Simple_repeat Simple_repeat 1 22 0 1774 136 40 67 chr10 117954178 117954552 -22362213 + THE1B LTR MaLR 1 364 0 777 250 109 0 chr10 117954620 117954840 -22361925 - MIR SINE MIR -1 261 18 258 156 0 0 chr10 117955318 117955363 -22361402 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 1758 162 43 20 chr10 117955423 117955726 -22361039 + AluJb SINE Alu 1 310 -2 2122 145 0 0 chr10 117955831 117956135 -22360630 + AluSx SINE Alu 1 304 -8 2325 75 0 0 chr10 117956251 117956531 -22360234 + AluY SINE Alu 1 280 -31 180 0 0 0 chr10 117956531 117956551 -22360214 + (CA)n Simple_repeat Simple_repeat 1 20 0 2420 236 18 10 chr10 117956749 117957368 -22359397 + MLT1E2 LTR MaLR 3 626 0 206 310 23 23 chr10 117957377 117957464 -22359301 + L2 LINE L2 2962 3048 -224 325 314 48 43 chr10 117957977 117958165 -22358600 + L3b LINE CR1 1178 1366 -217 688 243 59 6 chr10 117958166 117958335 -22358430 + MER5B DNA MER1_type 1 178 0 301 198 56 40 chr10 117958538 117958664 -22358101 - L1ME4a LINE L1 -3 6118 5991 1377 86 0 0 chr10 117958741 117958916 -22357849 - AluY SINE Alu -4 307 133 2311 69 13 7 chr10 117958916 117959219 -22357546 - AluY SINE Alu -6 305 1 10379 24 1 1 chr10 117959335 117961334 -22355431 + L1PA3 LINE L1 4151 6151 -4 602 302 57 19 chr10 117961335 117961650 -22355115 - L1ME4a LINE L1 -232 5889 5563 2280 97 3 3 chr10 117962221 117962530 -22354235 - AluSp SINE Alu -4 309 1 748 165 181 0 chr10 117962573 117962706 -22354059 + FAM SINE Alu 1 157 -18 2659 26 0 0 chr10 117962706 117963009 -22353756 - AluY SINE Alu -8 303 1 196 300 0 0 chr10 117963071 117963121 -22353644 + MIR SINE MIR 199 248 -14 1876 177 7 0 chr10 117964592 117964891 -22351874 - AluJo SINE Alu -11 301 1 22 0 0 0 chr10 117964949 117964971 -22351794 + AT_rich Low_complexity Low_complexity 1 22 0 387 339 23 8 chr10 117964992 117965122 -22351643 - MIR SINE MIR -98 164 33 889 247 204 18 chr10 117965226 117965797 -22350968 + L2 LINE L2 2627 3313 0 294 291 40 166 chr10 117965888 117966262 -22350503 - L2 LINE L2 -29 3243 2917 25 31 0 0 chr10 117966429 117966461 -22350304 + AT_rich Low_complexity Low_complexity 1 32 0 741 242 88 46 chr10 117969155 117969395 -22347370 + MIR SINE MIR 9 258 -4 2503 71 3 3 chr10 117971026 117971337 -22345428 - AluSp SINE Alu -2 311 1 212 365 39 19 chr10 117971519 117971623 -22345142 + L2 LINE L2 3156 3261 -11 489 224 79 59 chr10 117971928 117972017 -22344748 - MIR SINE MIR -50 212 117 2344 107 0 0 chr10 117972017 117972317 -22344448 + AluSx SINE Alu 1 300 -12 489 224 79 59 chr10 117972317 117972379 -22344386 - MIR SINE MIR -145 117 58 451 328 17 35 chr10 117972394 117972568 -22344197 + L2 LINE L2 3097 3267 -5 1655 214 73 62 chr10 117972591 117973125 -22343640 - MLT1F LTR MaLR -2 540 1 203 100 0 50 chr10 117973275 117973315 -22343450 + (CATA)n Simple_repeat Simple_repeat 3 40 0 284 317 12 0 chr10 117975422 117975504 -22341261 - L3 LINE CR1 -1 1576 1494 2513 40 0 10 chr10 117975647 117975946 -22340819 + AluY SINE Alu 1 296 -15 2441 79 0 0 chr10 117976750 117977053 -22339712 - AluY SINE Alu -8 303 1 1793 172 0 35 chr10 117977417 117977736 -22339029 - AluJo SINE Alu -4 308 1 769 311 43 87 chr10 117980471 117980993 -22335772 - L2 LINE L2 -5 3267 2758 234 333 0 0 chr10 117981284 117981356 -22335409 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 954 284 93 27 chr10 117981410 117982485 -22334280 + L1MEd LINE L1 561 1734 -4576 22 35 0 0 chr10 117982499 117982528 -22334237 + AT_rich Low_complexity Low_complexity 1 29 0 320 233 129 0 chr10 117982766 117982882 -22333883 + L1M4 LINE L1 4313 4443 -1703 2226 113 3 0 chr10 117982885 117983186 -22333579 + AluSx SINE Alu 1 302 -10 493 226 137 6 chr10 117983198 117983366 -22333399 + MIR SINE MIR 65 254 -8 201 39 0 0 chr10 117983374 117983400 -22333365 + (CAT)n Simple_repeat Simple_repeat 3 28 0 329 0 24 0 chr10 117983497 117983538 -22333227 + (TA)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr10 117983537 117983561 -22333204 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 362 284 60 17 chr10 117985248 117985364 -22331401 - L2 LINE L2 -5 3267 3147 2442 90 3 0 chr10 117985521 117985833 -22330932 + AluSq SINE Alu 1 313 0 244 236 79 22 chr10 117986231 117986320 -22330445 - MER103 DNA DNA -3 163 70 316 252 160 0 chr10 117986473 117986592 -22330173 - MIR SINE MIR -76 186 49 209 83 28 0 chr10 117987002 117987038 -22329727 + (GA)n Simple_repeat Simple_repeat 1 37 0 26 30 0 0 chr10 117987423 117987456 -22329309 + AT_rich Low_complexity Low_complexity 1 33 0 22 70 0 0 chr10 117989531 117989574 -22327191 + AT_rich Low_complexity Low_complexity 1 43 0 1848 178 0 3 chr10 117989827 117990125 -22326640 + AluJb SINE Alu 1 297 -15 1991 95 0 18 chr10 117990306 117990368 -22326397 + L1PB1 LINE L1 5841 5903 -248 2341 86 0 7 chr10 117990368 117990671 -22326094 + AluSq SINE Alu 1 301 -12 1991 95 0 18 chr10 117990671 117990892 -22325873 + L1PB1 LINE L1 5903 6119 -32 252 289 67 11 chr10 117991169 117991259 -22325506 - MIR SINE MIR -56 152 58 202 114 29 0 chr10 117991592 117991627 -22325138 + GA-rich Low_complexity Low_complexity 3 38 0 29 28 0 0 chr10 117991832 117991868 -22324897 + AT_rich Low_complexity Low_complexity 1 36 0 204 182 0 23 chr10 117992039 117992083 -22324682 + L2 LINE L2 3261 3303 -10 259 345 86 14 chr10 117992108 117992247 -22324518 + MER5A DNA MER1_type 8 156 -33 210 324 0 0 chr10 117992620 117992694 -22324071 + (TA)n Simple_repeat Simple_repeat 1 74 0 740 316 85 3 chr10 117992700 117993017 -22323748 - L2 LINE L2 -2 3311 2969 331 261 74 18 chr10 117993084 117993311 -22323454 - L1MC4a LINE L1 -298 5823 5675 25 0 0 0 chr10 117993794 117993819 -22322946 + AT_rich Low_complexity Low_complexity 1 25 0 405 191 0 45 chr10 117993824 117993913 -22322852 - L1ME4a LINE L1 -94 6027 5943 505 345 36 1 chr10 117995457 117995666 -22321099 - MIR SINE MIR -37 225 12 2398 70 0 23 chr10 117995852 117996153 -22320612 + AluSq SINE Alu 1 294 -19 21 57 0 0 chr10 117996236 117996271 -22320494 + AT_rich Low_complexity Low_complexity 1 35 0 1955 190 8 0 chr10 117996271 117996635 -22320130 - L1MB5 LINE L1 -10 6164 5798 300 227 125 11 chr10 117996640 117996728 -22320037 + MIR SINE MIR 50 147 -61 597 275 77 8 chr10 117997098 117997389 -22319376 + MER20B DNA MER1_type 10 352 -431 827 307 78 10 chr10 117997418 117997724 -22319041 - MLT1I LTR MaLR -10 399 73 836 213 34 72 chr10 117997761 117998024 -22318741 + MER20B DNA MER1_type 422 674 -109 753 87 0 0 chr10 117998052 117998155 -22318610 + AluSg SINE Alu 1 103 -207 246 316 38 8 chr10 117998294 117998427 -22318338 - MIR SINE MIR -5 257 121 504 32 0 0 chr10 117999499 117999561 -22317204 + (CA)n Simple_repeat Simple_repeat 2 63 0 347 379 91 17 chr10 118000135 118000433 -22316332 - L2 LINE L2 -36 3236 2917 227 269 0 0 chr10 118000615 118000667 -22316098 - L2 LINE L2 -665 2649 2598 275 277 71 21 chr10 118000973 118001114 -22315651 - L2 LINE L2 -1096 2218 2071 2266 92 0 20 chr10 118001456 118001759 -22315006 + AluSc SINE Alu 1 297 -12 2025 95 32 11 chr10 118002399 118002682 -22314083 + AluSc SINE Alu 1 289 -20 21 0 0 0 chr10 118003570 118003591 -22313174 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 118003743 118003767 -22312998 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr10 118003855 118003886 -22312879 + AT_rich Low_complexity Low_complexity 1 31 0 237 246 43 29 chr10 118004944 118005013 -22311752 + MIR SINE MIR 84 153 -109 204 40 0 0 chr10 118007621 118007646 -22309119 + (TG)n Simple_repeat Simple_repeat 1 25 0 209 324 153 27 chr10 118007648 118007759 -22309006 - L2 LINE L2 -22 3250 3126 1957 126 3 49 chr10 118007985 118008311 -22308454 - AluSq SINE Alu -2 311 1 241 217 0 0 chr10 118010157 118010203 -22306562 + L2 LINE L2 3224 3269 -3 251 295 174 27 chr10 118010590 118010739 -22306026 + MIR3 SINE MIR 28 198 -10 2049 94 52 10 chr10 118011535 118011823 -22304942 - AluSq SINE Alu -13 300 1 2063 145 0 6 chr10 118012771 118013082 -22303683 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 118013711 118013732 -22303033 + AT_rich Low_complexity Low_complexity 1 21 0 6904 134 50 9 chr10 118014626 118015808 -22300957 - Tigger3b DNA MER2_type -1 1230 1 2141 113 0 7 chr10 118016329 118016621 -22300144 - AluSc SINE Alu -19 290 1 24 53 0 0 chr10 118016681 118016719 -22300046 + AT_rich Low_complexity Low_complexity 1 38 0 1881 156 0 20 chr10 118017451 118017752 -22299013 + AluJb SINE Alu 1 295 -17 229 65 0 65 chr10 118017753 118017799 -22298966 + (GGAA)n Simple_repeat Simple_repeat 1 43 0 2636 78 2 78 chr10 118017889 118018297 -22298468 - MER51B LTR ERV1 0 377 1 710 210 37 6 chr10 118018542 118018704 -22298061 + MIR SINE MIR 88 254 -8 2038 81 50 3 chr10 118019488 118019793 -22296972 - AluY SINE Alu 0 311 1 405 218 0 0 chr10 118019975 118020053 -22296712 - MER58A DNA MER1_type -28 79 2 639 177 0 92 chr10 118020062 118020226 -22296539 + MER5A DNA MER1_type 1 149 -40 193 333 38 38 chr10 118020855 118020960 -22295805 + MER5A DNA MER1_type 85 189 0 1333 146 121 50 chr10 118021400 118021681 -22295084 - AluJo SINE Alu -11 301 1 1973 153 77 20 chr10 118021792 118022197 -22294568 + MSTA LTR MaLR 1 428 0 21 71 0 0 chr10 118022401 118022443 -22294322 + AT_rich Low_complexity Low_complexity 1 42 0 896 186 22 35 chr10 118022583 118022814 -22293951 + L1M4 LINE L1 4959 5186 -960 210 37 0 0 chr10 118022816 118022843 -22293922 + (TG)n Simple_repeat Simple_repeat 2 28 0 194 289 0 107 chr10 118022968 118023089 -22293676 + MIR SINE MIR 30 137 -71 1695 171 7 4 chr10 118023118 118023399 -22293366 - AluJo SINE Alu -30 282 1 214 376 40 24 chr10 118023501 118023626 -22293139 - L2 LINE L2 -5 3267 3141 1007 269 23 43 chr10 118023637 118023983 -22292782 - MER102b DNA MER1_type -1 340 2 225 159 0 0 chr10 118024701 118024745 -22292020 + (CA)n Simple_repeat Simple_repeat 2 45 0 232 313 50 20 chr10 118024878 118024977 -22291788 - MER102a DNA MER1_type -8 322 221 2181 79 4 4 chr10 118025108 118025410 -22291355 - AluSc SINE Alu 0 302 1 412 268 21 0 chr10 118025421 118025518 -22291247 - MIR3 SINE MIR -18 190 92 842 153 47 0 chr10 118025598 118025748 -22291017 + MER3 DNA MER1_type 39 195 -14 362 268 43 14 chr10 118025786 118025924 -22290841 - L1MCc LINE L1 -4352 2770 2629 1906 124 0 7 chr10 118025978 118026275 -22290490 - AluSx SINE Alu 0 312 21 1020 128 7 7 chr10 118026279 118026427 -22290338 - AluSq/x SINE Alu -165 148 1 1404 282 62 35 chr10 118026429 118026777 -22289988 - L1MCc LINE L1 -4577 2545 2208 2128 121 3 16 chr10 118026777 118027084 -22289681 - AluSx SINE Alu -9 303 1 1404 282 62 35 chr10 118027084 118027767 -22288998 - L1MCc LINE L1 -4914 2208 1273 261 0 0 0 chr10 118027935 118027964 -22288801 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 23 0 0 0 chr10 118029393 118029416 -22287349 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 118029978 118029999 -22286766 + AT_rich Low_complexity Low_complexity 1 21 0 370 250 83 17 chr10 118031474 118031594 -22285171 + L2 LINE L2 3179 3306 -7 680 256 91 52 chr10 118031820 118032050 -22284715 - MIR SINE MIR -6 256 18 21 0 0 0 chr10 118036554 118036575 -22280190 + AT_rich Low_complexity Low_complexity 1 21 0 189 171 0 0 chr10 118036867 118036902 -22279863 + CT-rich Low_complexity Low_complexity 2 36 0 209 171 0 0 chr10 118037695 118037730 -22279035 + (TG)n Simple_repeat Simple_repeat 2 36 0 1899 146 19 16 chr10 118038047 118038356 -22278409 + AluSx SINE Alu 1 310 -2 227 261 0 0 chr10 118038457 118038503 -22278262 + (CACG)n Simple_repeat Simple_repeat 1 46 0 462 305 39 16 chr10 118039669 118039837 -22276928 - MIR SINE MIR -55 153 39 280 339 28 18 chr10 118040202 118040311 -22276454 - MIR SINE MIR -30 232 123 291 247 86 12 chr10 118040642 118040723 -22276042 - L3b LINE CR1 -138 1445 1359 779 211 63 16 chr10 118040853 118041043 -22275722 + MIR SINE MIR 61 259 -3 27 29 0 0 chr10 118041193 118041227 -22275538 + AT_rich Low_complexity Low_complexity 1 34 0 430 272 69 52 chr10 118041740 118041913 -22274852 - MLT1K LTR MaLR 0 588 413 290 330 30 0 chr10 118042146 118042246 -22274519 - MLT1K LTR MaLR -479 109 7 21 57 0 0 chr10 118043992 118044027 -22272738 + AT_rich Low_complexity Low_complexity 1 35 0 324 324 110 36 chr10 118045269 118045488 -22271277 - MIR SINE MIR -11 251 17 1589 184 13 32 chr10 118046078 118046393 -22270372 - AluJo SINE Alu -3 309 1 770 187 58 7 chr10 118046414 118046569 -22270196 + MER58 DNA MER1_type 1 163 -2257 365 273 45 9 chr10 118048228 118048338 -22268427 - L2 LINE L2 0 3313 3200 22 35 0 0 chr10 118048542 118048571 -22268194 + AT_rich Low_complexity Low_complexity 1 29 0 2190 102 7 0 chr10 118048774 118049069 -22267696 + AluSq SINE Alu 1 297 -16 366 268 244 0 chr10 118049103 118049312 -22267453 - L1ME4a LINE L1 -66 6055 5796 269 284 74 92 chr10 118049438 118049450 -22267315 - HAL1b LINE L1 -644 704 693 2332 96 0 7 chr10 118049450 118049751 -22267014 - AluSg SINE Alu -11 299 1 269 284 74 92 chr10 118049751 118050009 -22266756 - HAL1b LINE L1 -655 693 439 2666 48 0 0 chr10 118052234 118052544 -22264221 - AluY SINE Alu 0 311 2 2397 98 0 0 chr10 118052961 118053266 -22263499 - AluSx SINE Alu -7 305 1 2199 118 10 0 chr10 118053526 118053704 -22263061 - AluSq SINE Alu -5 308 124 189 0 0 0 chr10 118053704 118053725 -22263040 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2199 118 10 0 chr10 118053725 118053851 -22262914 - AluSq SINE Alu -189 124 1 294 250 13 26 chr10 118054693 118054769 -22261996 + MER102b DNA MER1_type 1 75 -266 3157 205 17 12 chr10 118054776 118055426 -22261339 - L1ME1 LINE L1 -15 6151 5499 279 314 88 0 chr10 118055451 118055553 -22261212 + MER102b DNA MER1_type 231 341 0 413 272 123 44 chr10 118055581 118055809 -22260956 + MIR SINE MIR 5 250 -12 194 225 14 145 chr10 118055857 118055995 -22260770 - MER5A DNA MER1_type -19 170 51 1717 150 34 8 chr10 118056009 118056322 -22260443 + AluSx SINE Alu 12 331 0 396 273 0 0 chr10 118056385 118056462 -22260303 + MIR SINE MIR 42 118 -90 205 313 162 10 chr10 118057209 118057308 -22259457 + L3b LINE CR1 1468 1581 -2 381 244 87 31 chr10 118057874 118058001 -22258764 + L2 LINE L2 3136 3269 -3 2132 126 0 0 chr10 118058277 118058593 -22258172 + AluSq SINE Alu 1 313 0 2343 64 4 0 chr10 118058944 118059224 -22257541 + AluSg SINE Alu 6 286 -24 203 308 123 54 chr10 118059263 118059375 -22257390 + L2 LINE L2 3133 3257 -15 405 58 0 0 chr10 118059375 118059427 -22257338 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 203 308 123 54 chr10 118059427 118059444 -22257321 + L2 LINE L2 3257 3271 -1 2138 109 0 3 chr10 118059698 118060004 -22256761 + AluSx SINE Alu 1 305 0 189 0 0 0 chr10 118061107 118061128 -22255637 + (TA)n Simple_repeat Simple_repeat 1 21 0 1128 156 0 0 chr10 118062195 118062375 -22254390 - AluSg/x SINE Alu -1 309 130 2340 100 13 0 chr10 118062399 118062708 -22254057 - AluSp SINE Alu 0 313 1 369 0 0 0 chr10 118062879 118062920 -22253845 + (TG)n Simple_repeat Simple_repeat 2 42 0 1037 183 32 5 chr10 118064243 118064429 -22252336 - MLT1A1 LTR MaLR 0 365 175 2292 90 10 0 chr10 118064563 118064851 -22251914 + AluSg SINE Alu 1 291 -19 2464 94 0 0 chr10 118064851 118065160 -22251605 + AluSg1 SINE Alu 1 309 0 329 286 59 15 chr10 118065162 118065323 -22251442 - MIR SINE MIR -62 146 9 357 335 127 21 chr10 118065412 118065648 -22251117 - MIR SINE MIR 0 262 2 1200 141 0 0 chr10 118067422 118067599 -22249166 - AluSg/x SINE Alu -2 310 134 2039 141 3 0 chr10 118067599 118067898 -22248867 - AluSx SINE Alu -12 300 1 2393 75 7 0 chr10 118068298 118068590 -22248175 + AluSp SINE Alu 1 294 -19 1609 152 6 56 chr10 118069891 118070214 -22246551 - AluJo SINE Alu -5 307 1 334 294 88 7 chr10 118070230 118070366 -22246399 - LTR67 LTR ERVL 0 557 411 956 160 0 53 chr10 118072179 118072348 -22244417 - AluJb SINE Alu -19 293 134 2262 102 0 0 chr10 118072351 118072644 -22244121 - AluSg SINE Alu -17 293 1 1892 123 11 4 chr10 118074695 118074971 -22241794 - AluSx SINE Alu -2 310 33 229 352 56 9 chr10 118075053 118075161 -22241604 + L2 LINE L2 3144 3256 -16 2180 124 3 0 chr10 118075221 118075519 -22241246 - AluSx SINE Alu -13 299 1 282 95 0 0 chr10 118075808 118075850 -22240915 + (TG)n Simple_repeat Simple_repeat 1 42 0 342 0 0 0 chr10 118077487 118077525 -22239240 + (CA)n Simple_repeat Simple_repeat 1 38 0 624 214 30 0 chr10 118078443 118078574 -22238191 - MIR SINE MIR -71 191 57 696 279 54 14 chr10 118079312 118079534 -22237231 + L2 LINE L2 3083 3313 0 351 363 117 18 chr10 118081314 118081595 -22235170 - L2 LINE L2 -1 3271 2963 1350 172 17 13 chr10 118081631 118081864 -22234901 + MER46A DNA MER2_type 1 234 -2 845 256 72 75 chr10 118082328 118082896 -22233869 - MLT1G1 LTR MaLR -5 562 1 4256 164 61 16 chr10 118084440 118084561 -22232204 - L1MB7 LINE L1 -9 6175 6061 2345 88 3 0 chr10 118084561 118084858 -22231907 - AluSp SINE Alu -15 298 1 4256 164 61 16 chr10 118084858 118085539 -22231226 - L1MB7 LINE L1 -123 6061 5337 378 289 61 0 chr10 118085787 118085901 -22230864 - MIR3 SINE MIR -41 167 47 339 304 87 12 chr10 118085999 118086160 -22230605 - MIR SINE MIR -24 238 66 197 275 84 76 chr10 118086557 118086688 -22230077 - MIR3 SINE MIR -75 133 2 731 248 64 90 chr10 118086703 118087014 -22229751 + L3 LINE CR1 1265 1567 -10 2334 55 0 0 chr10 118087260 118087532 -22229233 + L1PA5 LINE L1 5880 6151 -3 645 199 45 68 chr10 118087663 118087839 -22228926 + MER5B DNA MER1_type 1 172 -6 554 216 101 14 chr10 118087969 118088117 -22228648 + MIR SINE MIR 2 162 -100 207 69 0 0 chr10 118089799 118089828 -22226937 + (A)n Simple_repeat Simple_repeat 1 29 0 1879 224 99 99 chr10 118089830 118091063 -22225702 - L1MC4 LINE L1 -6 8036 6682 406 277 0 0 chr10 118091930 118092024 -22224741 + MER5C DNA MER1_type 29 122 -202 330 149 14 40 chr10 118092163 118092237 -22224528 + MER5C DNA MER1_type 250 321 -3 189 219 85 98 chr10 118092288 118092370 -22224395 + L2 LINE L2 3183 3263 -9 24 0 0 0 chr10 118092439 118092463 -22224302 + AT_rich Low_complexity Low_complexity 1 24 0 358 293 183 16 chr10 118093830 118094021 -22222744 - MIR SINE MIR -30 232 10 213 281 141 8 chr10 118094430 118094551 -22222214 - MIR SINE MIR -23 239 103 288 336 0 27 chr10 118095599 118095709 -22221056 + CT-rich Low_complexity Low_complexity 6 112 0 21 0 0 0 chr10 118095882 118095903 -22220862 + AT_rich Low_complexity Low_complexity 1 21 0 2375 80 3 7 chr10 118096304 118096604 -22220161 + AluSq SINE Alu 1 299 -14 218 206 0 55 chr10 118098177 118098250 -22218515 + T-rich Low_complexity Low_complexity 6 74 0 1342 176 185 0 chr10 118098252 118098545 -22218220 - L1MB5 LINE L1 -1 6173 5831 2134 101 14 0 chr10 118098738 118099064 -22217701 - AluSq SINE Alu 0 330 1 301 338 113 41 chr10 118099080 118099663 -22217102 + L2 LINE L2 2647 3286 -27 1979 100 82 7 chr10 118099663 118099944 -22216821 - AluSx SINE Alu -10 302 1 301 338 113 41 chr10 118099944 118099968 -22216797 + L2 LINE L2 3286 3307 -6 21 36 0 0 chr10 118101001 118101029 -22215736 + AT_rich Low_complexity Low_complexity 1 28 0 183 114 38 38 chr10 118101036 118101115 -22215650 + (TA)n Simple_repeat Simple_repeat 1 79 0 254 138 52 0 chr10 118101117 118101175 -22215590 + LTR66 LTR ERVL 394 454 -156 456 250 250 70 chr10 118101176 118101460 -22215305 + L2 LINE L2 2963 3297 -16 213 213 0 0 chr10 118101460 118101507 -22215258 + (TGGA)n Simple_repeat Simple_repeat 2 48 0 402 343 98 40 chr10 118101733 118102030 -22214735 + L3 LINE CR1 1263 1576 -1 1840 101 0 48 chr10 118102072 118102340 -22214425 - AluSc SINE Alu 0 309 55 466 349 51 48 chr10 118103253 118103545 -22213220 + L2 LINE L2 2978 3270 -2 1917 116 22 4 chr10 118105294 118105593 -22211172 - AluSx SINE Alu 0 308 5 3558 164 47 56 chr10 118105624 118106186 -22210579 + L1MB7 LINE L1 5430 5985 -199 1869 116 4 4 chr10 118106186 118106444 -22210321 + AluSx SINE Alu 1 258 -54 3558 164 47 56 chr10 118106444 118106633 -22210132 + L1MB7 LINE L1 5985 6174 -10 396 0 0 0 chr10 118108026 118108070 -22208695 + (TG)n Simple_repeat Simple_repeat 2 45 0 343 247 0 0 chr10 118109085 118109158 -22207607 + MER116 DNA Mariner 6 78 -2 366 241 23 11 chr10 118109357 118109444 -22207321 + MER46C DNA MER2_type 164 251 -87 1723 173 54 0 chr10 118109462 118109757 -22207008 - AluJo SINE Alu -1 311 1 1693 224 80 16 chr10 118109899 118110385 -22206380 - MER69 DNA AcHobo 0 2526 2010 1270 233 100 19 chr10 118110392 118110849 -22205916 - MER69 DNA AcHobo -667 559 37 259 280 75 65 chr10 118110890 118110983 -22205782 - MIR SINE MIR -162 100 7 707 247 77 16 chr10 118111934 118112128 -22204637 - MIR SINE MIR -56 206 1 1722 134 158 3 chr10 118112295 118112593 -22204172 - MER7A DNA MER2_type -4 342 1 497 246 16 16 chr10 118113016 118113142 -22203623 - MIR3 SINE MIR -32 176 51 2554 49 0 13 chr10 118113633 118113940 -22202825 - AluY SINE Alu -7 304 2 961 201 29 14 chr10 118113940 118114149 -22202616 - Charlie2a DNA MER1_type -1179 1683 1472 1345 246 194 10 chr10 118114258 118114762 -22202003 - Charlie2b DNA MER1_type -2120 662 66 260 219 95 31 chr10 118114782 118114920 -22201845 + L1M1 LINE L1 5662 5814 -400 1625 157 15 89 chr10 118115187 118115524 -22201241 - AluJo SINE Alu 0 312 1 205 313 73 0 chr10 118116331 118116427 -22200338 + L2 LINE L2 3193 3295 -18 198 0 0 0 chr10 118116488 118116510 -22200255 + (A)n Simple_repeat Simple_repeat 1 22 0 261 284 62 0 chr10 118117052 118117133 -22199632 + MIR SINE MIR 79 164 -98 2134 125 7 3 chr10 118117197 118117501 -22199264 + AluSx SINE Alu 1 305 -7 2270 110 0 3 chr10 118118082 118118390 -22198375 + AluSq SINE Alu 1 307 -6 460 238 49 8 chr10 118118901 118119023 -22197742 - MIR SINE MIR -19 243 117 1609 145 50 18 chr10 118119203 118119486 -22197279 - AluJo SINE Alu -20 292 1 376 253 0 35 chr10 118120478 118120565 -22196200 + MIR SINE MIR 32 115 -147 389 269 0 31 chr10 118120803 118120933 -22195832 + MIR SINE MIR 124 249 -13 205 60 0 80 chr10 118121477 118121527 -22195238 + (TC)n Simple_repeat Simple_repeat 2 47 0 785 227 149 8 chr10 118121925 118122167 -22194598 - Charlie8 DNA MER1_type -2141 276 1 192 173 173 107 chr10 118122668 118122743 -22194022 + MIR SINE MIR 70 149 -113 22 0 0 0 chr10 118124313 118124335 -22192430 + AT_rich Low_complexity Low_complexity 1 22 0 2105 107 7 23 chr10 118125028 118125336 -22191429 - AluSx SINE Alu -9 303 1 281 164 16 16 chr10 118125494 118125555 -22191210 + L1ME4a LINE L1 5964 6024 -97 25 0 0 0 chr10 118125611 118125636 -22191129 + AT_rich Low_complexity Low_complexity 1 25 0 2109 132 3 7 chr10 118125717 118126021 -22190744 + AluSx SINE Alu 1 303 -9 26 0 0 0 chr10 118126059 118126085 -22190680 + AT_rich Low_complexity Low_complexity 1 26 0 644 280 60 0 chr10 118126094 118126276 -22190489 - MIR SINE MIR -42 220 28 195 208 21 0 chr10 118126415 118126463 -22190302 + MIR SINE MIR 158 206 -56 417 203 104 77 chr10 118126702 118126871 -22189894 + L1ME4a LINE L1 5856 6034 -87 1841 173 16 0 chr10 118126871 118127178 -22189587 - AluJo SINE Alu 0 312 1 417 203 104 77 chr10 118127178 118127230 -22189535 + L1ME4a LINE L1 6034 6083 -38 368 282 39 72 chr10 118128974 118129155 -22187610 + MIR3 SINE MIR 20 194 -14 1326 130 0 5 chr10 118129276 118129460 -22187305 - AluSg SINE Alu -127 183 1 245 283 0 22 chr10 118130691 118130783 -22185982 + L1M4 LINE L1 95 184 -6358 1812 241 90 65 chr10 118131113 118131972 -22184793 + L1M4 LINE L1 712 1591 -4951 5413 244 81 40 chr10 118131977 118133453 -22183312 + L1M4 LINE L1 1876 3451 -3193 2400 100 3 0 chr10 118133453 118133764 -22183001 + AluSx SINE Alu 1 312 0 5413 244 81 40 chr10 118133764 118134946 -22181819 + L1M4 LINE L1 3451 4583 -2061 876 209 124 13 chr10 118135112 118135337 -22181428 - MIR SINE MIR 0 262 13 23 0 0 0 chr10 118135702 118135725 -22181040 + AT_rich Low_complexity Low_complexity 1 23 0 615 243 49 52 chr10 118136577 118136960 -22179805 + L1MC4 LINE L1 7604 8039 -3 822 272 81 16 chr10 118137792 118138112 -22178653 - MER102b DNA MER1_type 0 341 1 309 234 0 0 chr10 118138177 118138241 -22178524 - MIR SINE MIR -79 129 66 2435 66 0 35 chr10 118138357 118138674 -22178091 - AluY SINE Alu -5 306 1 551 271 133 15 chr10 118139084 118139287 -22177478 + MIR SINE MIR 24 250 -12 3970 221 31 41 chr10 118139495 118140796 -22175969 - L1MB8 LINE L1 0 6178 4899 390 267 56 50 chr10 118141165 118141326 -22175439 + MIR SINE MIR 73 234 -28 356 320 28 44 chr10 118141941 118142122 -22174643 - MIR3 SINE MIR -4 204 27 212 382 42 28 chr10 118142358 118142502 -22174263 + MIR3 SINE MIR 43 188 -20 216 0 0 0 chr10 118145511 118145535 -22171230 + (TAA)n Simple_repeat Simple_repeat 3 26 0 238 162 44 15 chr10 118146683 118146751 -22170014 - L1ME4a LINE L1 -4 6117 6048 2031 139 13 3 chr10 118147216 118147525 -22169240 + AluSx SINE Alu 1 312 0 236 263 18 0 chr10 118148282 118148339 -22168426 + GA-rich Low_complexity Low_complexity 2 59 0 195 374 56 19 chr10 118148767 118148874 -22167891 - L2 LINE L2 -20 3293 3183 2054 138 10 3 chr10 118149007 118149303 -22167462 + AluJb SINE Alu 1 298 -14 286 312 91 38 chr10 118149314 118149500 -22167265 - L2 LINE L2 0 3272 3077 1973 123 0 60 chr10 118149608 118149926 -22166839 - AluSx SINE Alu -13 299 1 361 228 97 21 chr10 118149950 118150095 -22166670 - L1ME4a LINE L1 -5 6116 5961 303 192 55 0 chr10 118150207 118150280 -22166485 - L1ME4a LINE L1 -367 5754 5678 389 294 41 18 chr10 118150617 118150770 -22165995 + MER5A DNA MER1_type 1 167 -22 504 301 35 0 chr10 118150833 118151006 -22165759 + MIR SINE MIR 14 192 -70 1870 108 81 34 chr10 118152384 118152707 -22164058 - MER44D DNA MER2_type 0 609 2 2332 105 0 0 chr10 118152850 118153155 -22163610 + AluSg SINE Alu 3 307 -3 225 0 0 0 chr10 118155151 118155176 -22161589 + (TG)n Simple_repeat Simple_repeat 1 25 0 376 209 9 78 chr10 118155684 118155799 -22160966 - L3 LINE CR1 -4 1573 1467 295 293 155 0 chr10 118156400 118156516 -22160249 - L2 LINE L2 -61 3252 3119 391 285 40 58 chr10 118156553 118156710 -22160055 - LTR16B LTR ERVL 0 464 301 2144 100 0 45 chr10 118156710 118157019 -22159746 - AluSx SINE Alu -17 295 1 391 285 40 58 chr10 118157019 118157171 -22159594 - LTR16B LTR ERVL -163 301 148 2185 99 3 3 chr10 118157442 118157725 -22159040 - AluSx SINE Alu -29 283 1 2481 73 3 0 chr10 118158568 118158869 -22157896 + AluSp SINE Alu 1 302 -11 1380 145 121 44 chr10 118160771 118161073 -22155692 + AluJo SINE Alu 15 335 0 396 330 50 22 chr10 118161299 118161481 -22155284 - MIR SINE MIR -1 261 75 357 278 156 30 chr10 118161480 118161710 -22155055 + L2 LINE L2 2772 3041 -231 * 1963 96 66 4 chr10 118161722 118161993 -22154772 - AluSx SINE Alu -24 288 1 1792 179 7 10 chr10 118161993 118162294 -22154471 - AluJo SINE Alu -12 300 1 722 235 228 7 chr10 118162680 118162965 -22153800 - MLT1C LTR MaLR -10 457 110 2337 96 3 3 chr10 118162986 118163289 -22153476 + AluSq SINE Alu 9 311 -2 1985 149 0 0 chr10 118163357 118163645 -22153120 + AluJo SINE Alu 15 302 -10 376 154 115 0 chr10 118163646 118163724 -22153041 - MLT1C LTR MaLR -375 92 6 2434 95 3 0 chr10 118163751 118164056 -22152709 + AluSx SINE Alu 1 306 -6 963 279 51 49 chr10 118164056 118164504 -22152261 - MLT1K LTR MaLR -29 559 111 250 301 72 0 chr10 118165123 118165206 -22151559 - L2 LINE L2 0 3313 3225 477 326 86 37 chr10 118165399 118165528 -22151237 - MLT1K LTR MaLR -17 571 450 2180 117 10 13 chr10 118165528 118165836 -22150929 + AluSq SINE Alu 1 307 -6 477 326 86 37 chr10 118165836 118166136 -22150629 - MLT1K LTR MaLR -138 450 121 364 266 48 58 chr10 118166701 118166820 -22149945 - MLT1I LTR MaLR -217 192 74 2620 17 40 7 chr10 118166820 118167121 -22149644 + AluY SINE Alu 1 311 0 364 266 48 58 chr10 118167121 118167189 -22149576 - MLT1I LTR MaLR -335 74 7 197 295 90 13 chr10 118168447 118168525 -22148240 - L2 LINE L2 -25 3247 3164 315 0 0 0 chr10 118170553 118170588 -22146177 + (CA)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 118174175 118174199 -22142566 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr10 118175682 118175714 -22141051 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 349 205 167 0 chr10 118178245 118178323 -22138442 - L2 LINE L2 0 3272 3182 432 333 7 26 chr10 118179277 118179467 -22137298 - MIR3 SINE MIR -7 201 15 2111 90 4 0 chr10 118179709 118179977 -22136788 + AluSx SINE Alu 1 269 -43 452 256 6 70 chr10 118180127 118180283 -22136482 + MIR3 SINE MIR 51 196 -12 2446 235 91 19 chr10 118180407 118181134 -22135631 + MER45C DNA AcHobo 1 779 -174 1386 171 116 0 chr10 118181239 118181531 -22135234 + MER45B DNA AcHobo 715 1040 0 201 39 0 0 chr10 118182317 118182343 -22134422 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 366 292 51 15 chr10 118183380 118183517 -22133248 + MIR SINE MIR 51 192 -70 26 48 0 32 chr10 118183781 118183816 -22132949 + AT_rich Low_complexity Low_complexity 1 36 -24 2369 60 3 0 chr10 118183816 118184119 -22132646 - AluY SINE Alu 0 304 1 26 48 0 32 chr10 118184119 118184144 -22132621 + AT_rich Low_complexity Low_complexity 36 60 0 936 128 0 8 chr10 118184146 118184279 -22132486 + FLAM_C SINE Alu 2 133 0 2531 57 0 0 chr10 118184578 118184874 -22131891 + AluY SINE Alu 1 296 -15 2160 131 0 10 chr10 118184884 118185189 -22131576 + AluSx SINE Alu 1 302 -10 384 268 153 41 chr10 118185468 118185910 -22130855 + L2 LINE L2 2565 3058 -214 252 0 0 0 chr10 118186238 118186266 -22130499 + (TA)n Simple_repeat Simple_repeat 2 29 0 1325 138 0 5 chr10 118186266 118186454 -22130311 - AluJb SINE Alu -14 298 112 239 363 44 0 chr10 118186474 118186587 -22130178 + L2 LINE L2 3142 3259 -13 198 0 0 0 chr10 118186587 118186609 -22130156 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 500 316 31 42 chr10 118188836 118189029 -22127736 + MIR3 SINE MIR 8 198 -10 192 291 36 0 chr10 118189078 118189133 -22127632 + L2 LINE L2 3172 3228 -85 508 320 16 16 chr10 118189400 118189594 -22127171 + MIR SINE MIR 57 250 -12 724 226 54 43 chr10 118191708 118191894 -22124871 - MIR3 SINE MIR -6 202 15 2229 91 3 24 chr10 118192456 118192752 -22124013 + AluSg SINE Alu 1 290 -20 379 254 75 30 chr10 118192944 118193078 -22123687 + MIR3 SINE MIR 33 172 -36 280 292 46 23 chr10 118193332 118193462 -22123303 - MIR SINE MIR -36 226 94 403 280 60 27 chr10 118194179 118194329 -22122436 + MIR SINE MIR 20 174 -88 226 282 132 57 chr10 118194631 118194911 -22121854 - L2 LINE L2 -94 3178 2878 298 242 0 83 chr10 118195285 118195405 -22121360 + MIR SINE MIR 34 143 -119 2461 160 96 21 chr10 118195426 118195946 -22120819 + MER89 LTR ERV1 1 559 0 201 287 140 4 chr10 118196236 118196389 -22120376 + MIR SINE MIR 7 233 -29 852 55 0 0 chr10 118197467 118197577 -22119188 - AluSg/x SINE Alu -1 308 199 489 203 153 55 chr10 118197899 118198062 -22118703 + MIR3 SINE MIR 30 208 0 378 227 94 55 chr10 118198244 118198372 -22118393 - LTR33A LTR ERVL 0 523 391 454 309 7 14 chr10 118198520 118198659 -22118106 - MLT2E LTR ERVL -459 169 32 588 269 0 7 chr10 118198730 118198879 -22117886 + MER117 DNA MER1_type 1 148 -49 234 262 16 0 chr10 118199312 118199373 -22117392 + MIR3 SINE MIR 99 160 -48 2085 90 4 0 chr10 118199834 118200113 -22116652 - AluSx SINE Alu -31 281 2 2255 88 0 0 chr10 118201151 118201445 -22115320 + AluSx SINE Alu 1 294 -18 399 192 243 79 chr10 118201801 118201900 -22114865 + MER3 DNA MER1_type 1 82 -127 2376 81 0 0 chr10 118201900 118202209 -22114556 + AluY SINE Alu 1 309 -2 399 192 243 79 chr10 118202209 118202286 -22114479 + MER3 DNA MER1_type 82 206 -3 769 139 168 0 chr10 118202355 118202492 -22114273 + MLT1D LTR MaLR 346 505 0 247 260 0 65 chr10 118203228 118203305 -22113460 - L2 LINE L2 0 3272 3201 594 155 78 39 chr10 118203377 118203506 -22113259 + MLT1H LTR MaLR 416 549 0 271 281 11 11 chr10 118204228 118204317 -22112448 - L2 LINE L2 -213 3059 2971 694 200 16 89 chr10 118205966 118206122 -22110643 + MER69A DNA AcHobo 1 142 -2384 761 191 127 0 chr10 118206122 118206279 -22110486 - MER45A DNA AcHobo -1 177 1 694 200 16 89 chr10 118206279 118206312 -22110453 + MER69A DNA AcHobo 142 176 -1 358 198 38 9 chr10 118207023 118207129 -22109636 - LTR33A LTR ERVL -9 514 406 227 244 39 64 chr10 118208081 118208159 -22108606 + MLT1K LTR MaLR 28 103 -485 2095 105 6 25 chr10 118208186 118208500 -22108265 - AluSg SINE Alu -2 308 1 255 326 35 0 chr10 118208790 118208876 -22107889 + MIR SINE MIR 83 171 -91 561 277 15 7 chr10 118209725 118209862 -22106903 - MIR SINE MIR -114 148 11 260 293 65 15 chr10 118209936 118210066 -22106699 + MIR SINE MIR 21 163 -61 246 227 159 34 chr10 118211174 118211262 -22105503 + L2 LINE L2 3203 3301 -12 2887 138 14 82 chr10 118212179 118212737 -22104028 - MLT2B1 LTR ERVL 0 520 1 315 0 0 0 chr10 118212745 118212780 -22103985 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 199 214 107 0 chr10 118213119 118213175 -22103590 + MIR SINE MIR 97 158 -104 606 179 70 19 chr10 118213318 118213474 -22103291 - Charlie4 DNA MER1_type -27 1934 1771 2186 106 13 0 chr10 118213476 118213777 -22102988 - AluSx SINE Alu -7 305 1 959 134 0 37 chr10 118213778 118213942 -22102823 - AluSq SINE Alu -14 299 142 1554 134 29 0 chr10 118213944 118214190 -22102575 + AluSx SINE Alu 45 297 -15 1026 145 0 6 chr10 118215223 118215691 -22101074 + (TGGA)n Simple_repeat Simple_repeat 1 465 0 346 308 42 25 chr10 118217064 118217184 -22099581 + L2 LINE L2 3142 3263 -9 354 306 65 70 chr10 118217208 118217437 -22099328 - MIR SINE MIR -29 233 6 436 282 81 7 chr10 118217706 118217855 -22098910 + MIR3 SINE MIR 21 180 -28 180 266 117 78 chr10 118218027 118218155 -22098610 + MIR3 SINE MIR 14 146 -62 2127 125 0 0 chr10 118218236 118218533 -22098232 + AluSq SINE Alu 2 298 -15 242 95 24 0 chr10 118218904 118218946 -22097819 + (TA)n Simple_repeat Simple_repeat 2 44 0 2382 125 23 8 chr10 118218946 118219299 -22097466 - THE1B LTR MaLR -5 359 2 271 191 64 154 chr10 118219404 118219592 -22097173 + L1ME4a LINE L1 5944 6114 -7 648 187 187 11 chr10 118219670 118219857 -22096908 + MLT1J LTR MaLR 3 222 -289 392 114 34 80 chr10 118219911 118219999 -22096766 + MLT1J LTR MaLR 419 502 -9 463 290 137 13 chr10 118220544 118220865 -22095900 - L1MC5 LINE L1 -1027 6787 6414 1185 196 52 110 chr10 118220897 118221339 -22095426 + L1MC5 LINE L1 6779 7188 -802 2136 115 3 0 chr10 118221339 118221644 -22095121 + AluSq SINE Alu 1 306 -7 1185 196 52 110 chr10 118221644 118221715 -22095050 + L1MC5 LINE L1 7188 7262 -728 771 214 63 32 chr10 118221802 118222054 -22094711 + L1MC5 LINE L1 7262 7521 -440 * 1297 172 39 55 chr10 118222025 118222218 -22094547 + L1MB5 LINE L1 5860 6043 -131 2035 119 3 3 chr10 118222218 118222513 -22094252 - AluSq SINE Alu -18 295 1 1297 172 39 55 chr10 118222513 118222636 -22094129 + L1MB5 LINE L1 6043 6166 -8 623 204 92 73 chr10 118222648 118222738 -22094027 + L1MC5 LINE L1 7510 7597 -364 2228 84 10 0 chr10 118222738 118223034 -22093731 + AluSc SINE Alu 1 299 -10 623 204 92 73 chr10 118223034 118223355 -22093410 + L1MC5 LINE L1 7597 7929 -32 1053 251 49 65 chr10 118223382 118223833 -22092932 + L1ME4a LINE L1 5384 5826 -295 1830 162 0 3 chr10 118223833 118224142 -22092623 - AluJb SINE Alu -3 309 2 1053 251 49 65 chr10 118224142 118224243 -22092522 + L1ME4a LINE L1 5826 5927 -194 1958 122 31 0 chr10 118224587 118224881 -22091884 - AluSx SINE Alu -9 303 1 978 133 61 25 chr10 118224941 118225137 -22091628 + L1MA9 LINE L1 6106 6308 -4 33 0 0 0 chr10 118225140 118225173 -22091592 + AT_rich Low_complexity Low_complexity 1 33 0 2162 90 0 27 chr10 118225198 118225526 -22091239 + AluSx SINE Alu 1 312 0 283 300 0 0 chr10 118225526 118225586 -22091179 + MER63 DNA MER1_type 1002 1061 -1 732 177 0 0 chr10 118225895 118226036 -22090729 + GA-rich Low_complexity Low_complexity 4 144 0 250 203 89 38 chr10 118226064 118226143 -22090622 + L2 LINE L2 3174 3256 -16 2091 110 3 3 chr10 118226210 118226509 -22090256 - AluSx SINE Alu -13 299 1 333 279 29 29 chr10 118226616 118226720 -22090045 - MIR SINE MIR -109 153 50 280 253 40 13 chr10 118227069 118227144 -22089621 - MIR SINE MIR -81 181 105 514 281 179 15 chr10 118227153 118227416 -22089349 - LTR16C LTR ERVL -40 451 146 1842 164 3 0 chr10 118227614 118227924 -22088841 + AluJb SINE Alu 1 311 -1 1810 132 3 57 chr10 118228013 118228331 -22088434 + AluSq SINE Alu 1 301 -12 785 228 56 28 chr10 118228699 118228914 -22087851 - MER58A DNA MER1_type -3 221 1 519 289 75 6 chr10 118228914 118229087 -22087678 - MIR SINE MIR -59 203 19 554 281 46 51 chr10 118230370 118230587 -22086178 + MIR SINE MIR 32 247 -15 1726 139 85 0 chr10 118230600 118230881 -22085884 - AluSq SINE Alu -8 305 1 1680 184 36 22 chr10 118230995 118231360 -22085405 - L1PB4 LINE L1 -5 6151 5782 205 54 18 71 chr10 118231364 118231420 -22085345 + (TA)n Simple_repeat Simple_repeat 1 53 0 320 258 11 34 chr10 118231425 118231514 -22085251 - L1MC4 LINE L1 -1339 6703 6617 2527 115 0 0 chr10 118231541 118231915 -22084850 - L1P5 LINE L1 -388 5768 5395 251 186 130 28 chr10 118231944 118232055 -22084710 + MIR SINE MIR 26 153 -55 2661 152 77 17 chr10 118232148 118232576 -22084189 + MLT2B2 LTR ERVL 4 466 -49 577 66 22 0 chr10 118232576 118232667 -22084098 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 2661 152 77 17 chr10 118232667 118232719 -22084046 + MLT2B2 LTR ERVL 466 513 -2 211 217 22 0 chr10 118233063 118233109 -22083656 + L2 LINE L2 3266 3312 -1 24 0 0 0 chr10 118233186 118233210 -22083555 + AT_rich Low_complexity Low_complexity 1 24 0 1174 250 158 27 chr10 118233216 118233736 -22083029 + MLT1G LTR MaLR 1 588 -2 516 229 46 23 chr10 118233751 118233816 -22082949 + L2 LINE L2 3180 3242 -71 607 242 67 6 chr10 118233816 118233981 -22082784 + MER96 DNA MER1_type 1 175 0 516 229 46 23 chr10 118233981 118234046 -22082719 + L2 LINE L2 3242 3313 0 227 385 0 34 chr10 118234094 118234211 -22082554 + MIR3 SINE MIR 9 121 -87 269 256 90 60 chr10 118234610 118234743 -22082022 + MIR SINE MIR 2 138 -124 1275 266 68 3 chr10 118234743 118235111 -22081654 - MLT1J2 LTR MaLR -20 430 39 248 349 23 0 chr10 118235136 118235265 -22081500 + MIR SINE MIR 128 259 -3 2110 111 10 0 chr10 118235969 118236267 -22080498 - AluSx SINE Alu -11 301 1 187 152 30 0 chr10 118236280 118236313 -22080452 - MIR SINE MIR -64 144 111 253 244 111 22 chr10 118236425 118236515 -22080250 - MLT1I LTR MaLR -25 384 287 2028 121 7 7 chr10 118237658 118237964 -22078801 + AluSx SINE Alu 1 306 -6 297 291 14 40 chr10 118238242 118238390 -22078375 - L1ME1 LINE L1 -5 6161 6018 534 293 54 24 chr10 118238765 118238932 -22077833 + MER91A DNA MER1_type 1 172 -24 205 360 0 0 chr10 118238932 118238982 -22077783 + MER91A DNA MER1_type 145 194 -2 1373 187 39 21 chr10 118239383 118239667 -22077098 - AluJo SINE Alu -23 289 1 498 252 39 26 chr10 118239811 118239966 -22076799 - MLT1K LTR MaLR 0 588 432 491 287 16 0 chr10 118240290 118240419 -22076346 - MLT1K LTR MaLR -155 433 303 264 195 156 109 chr10 118240473 118240601 -22076164 - MLT1K LTR MaLR -411 177 44 306 0 0 0 chr10 118240643 118240677 -22076088 + (CA)n Simple_repeat Simple_repeat 2 35 0 1643 167 14 7 chr10 118240710 118241004 -22075761 - AluJo SINE Alu -16 296 1 213 154 0 0 chr10 118242246 118242285 -22074480 + GA-rich Low_complexity Low_complexity 2 40 0 293 268 174 95 chr10 118242505 118243023 -22073742 - MLT1K LTR MaLR -12 576 18 205 314 0 14 chr10 118243091 118243161 -22073604 - L3 LINE CR1 -113 1464 1396 2446 117 22 8 chr10 118243703 118244062 -22072703 - THE1B LTR MaLR 0 364 1 243 270 11 11 chr10 118244157 118244246 -22072519 + MIR SINE MIR 57 145 -117 3310 176 57 63 chr10 118244248 118245102 -22071663 + L1MC4a LINE L1 6960 7808 0 1970 136 30 10 chr10 118245108 118245403 -22071362 + AluSx SINE Alu 1 301 -11 369 274 24 43 chr10 118246771 118246935 -22069830 + L2 LINE L2 1856 2016 -1298 376 278 125 48 chr10 118246937 118246975 -22069790 - MLT1K LTR MaLR -2 586 552 2204 101 3 7 chr10 118246975 118247296 -22069469 + AluSg SINE Alu 1 310 0 376 278 125 48 chr10 118247296 118247505 -22069260 - MLT1K LTR MaLR -36 552 320 322 268 195 0 chr10 118248025 118248148 -22068617 - MIR SINE MIR -96 166 20 1899 147 22 29 chr10 118248442 118248755 -22068010 + AluJb SINE Alu 1 311 -1 1583 156 86 11 chr10 118248798 118249067 -22067698 + AluJo SINE Alu 6 294 -18 668 290 6 0 chr10 118249077 118249253 -22067512 - MIR SINE MIR -68 194 18 2677 52 0 3 chr10 118249267 118249575 -22067190 + AluY SINE Alu 1 307 -4 2183 127 0 10 chr10 118249727 118250027 -22066738 + AluSx SINE Alu 1 297 -15 234 314 29 39 chr10 118250076 118250178 -22066587 - L2 LINE L2 -11 3302 3202 544 196 93 67 chr10 118250178 118250310 -22066455 - MLT1K LTR MaLR -18 570 443 2317 111 0 13 chr10 118250310 118250626 -22066139 + AluSq SINE Alu 2 313 0 216 0 0 0 chr10 118250629 118250653 -22066112 + (CAT)n Simple_repeat Simple_repeat 2 25 0 544 196 93 67 chr10 118250653 118250710 -22066055 - MLT1K LTR MaLR -146 442 372 184 335 57 44 chr10 118251040 118251198 -22065567 - L2 LINE L2 -190 3082 2923 2090 111 0 7 chr10 118251232 118251503 -22065262 + AluSx SINE Alu 24 292 -20 220 309 64 21 chr10 118252017 118252111 -22064654 - MER91C DNA MER1_type -40 100 3 243 239 14 14 chr10 118252852 118252923 -22063842 - MIR SINE MIR -79 129 59 451 175 75 0 chr10 118252981 118253061 -22063704 + MLT1F1 LTR MaLR 40 125 -442 1955 194 30 28 chr10 118253061 118253493 -22063272 + L1MD3 LINE L1 7404 7836 -159 926 161 68 0 chr10 118253500 118253661 -22063104 - AluJb SINE Alu -3 309 138 837 159 13 7 chr10 118253661 118253812 -22062953 + L1MD3 LINE L1 7835 7986 -9 856 276 151 43 chr10 118254311 118254839 -22061926 + MLT1H1 LTR MaLR 16 552 -3 923 282 82 43 chr10 118255002 118255323 -22061442 + L2 LINE L2 2709 3059 -254 1945 143 0 53 chr10 118255323 118255645 -22061120 - AluSx SINE Alu -7 305 1 923 282 82 43 chr10 118255645 118255911 -22060854 + L2 LINE L2 3059 3313 0 1552 216 27 6 chr10 118256070 118256404 -22060361 - MER58B DNA MER1_type 0 341 1 268 158 18 35 chr10 118256832 118256872 -22059893 - MLT2B1 LTR ERVL 0 520 480 270 0 0 0 chr10 118256872 118256902 -22059863 + (CA)n Simple_repeat Simple_repeat 2 31 0 268 158 18 35 chr10 118256902 118256918 -22059847 - MLT2B1 LTR ERVL -40 480 465 206 211 35 18 chr10 118256952 118257009 -22059756 + (TATG)n Simple_repeat Simple_repeat 1 58 0 1899 202 96 36 chr10 118257009 118257086 -22059679 - MLT2B1 LTR ERVL -41 479 408 1809 148 37 20 chr10 118257086 118257384 -22059381 + AluSx SINE Alu 1 303 -9 1899 202 96 36 chr10 118257384 118257756 -22059009 - MLT2B1 LTR ERVL -112 408 3 222 37 0 0 chr10 118257957 118257984 -22058781 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2116 136 0 0 chr10 118257997 118258284 -22058481 - AluSx SINE Alu -25 287 1 1951 127 32 19 chr10 118258332 118258640 -22058125 + AluSx SINE Alu 1 312 0 279 0 0 0 chr10 118258793 118258824 -22057941 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 2307 92 0 17 chr10 118258834 118259129 -22057636 - AluSx SINE Alu -22 290 1 33 0 0 0 chr10 118259154 118259187 -22057578 + AT_rich Low_complexity Low_complexity 1 33 0 996 133 61 25 chr10 118259190 118259386 -22057379 - L1MA9 LINE L1 -4 6308 6106 1998 133 31 0 chr10 118259444 118259738 -22057027 + AluSx SINE Alu 1 303 -9 1082 253 49 65 chr10 118260082 118260183 -22056582 - L1ME4a LINE L1 -194 5927 5826 1949 162 0 3 chr10 118260183 118260492 -22056273 + AluJb SINE Alu 2 309 -3 1082 253 49 65 chr10 118260492 118260943 -22055822 - L1ME4a LINE L1 -295 5826 5384 458 243 88 57 chr10 118260970 118261287 -22055478 - L1MC5 LINE L1 -32 7929 7603 299 100 33 0 chr10 118261291 118261351 -22055414 - AluSc SINE Alu 0 299 238 229 179 0 0 chr10 118261460 118261499 -22055266 + LTR16C LTR ERVL 413 451 -40 206 267 40 13 chr10 118261508 118261583 -22055182 + MIR SINE MIR 105 181 -81 296 274 29 29 chr10 118261932 118262034 -22054731 + MIR SINE MIR 50 151 -111 2218 110 3 3 chr10 118262143 118262442 -22054323 + AluSx SINE Alu 1 299 -13 226 184 20 61 chr10 118262509 118262558 -22054207 - L2 LINE L2 -16 3256 3210 732 177 0 0 chr10 118262616 118262757 -22054008 + CT-rich Low_complexity Low_complexity 4 144 0 290 292 0 0 chr10 118263066 118263126 -22053639 - MER63 DNA MER1_type -1 1061 1001 2127 113 0 23 chr10 118263126 118263452 -22053313 - AluSx SINE Alu 0 312 1 1954 155 7 3 chr10 118263458 118263755 -22053010 - AluSx SINE Alu -13 299 2 891 123 31 0 chr10 118263781 118263911 -22052854 - MER63 DNA MER1_type -76 760 1 356 118 15 0 chr10 118264085 118264153 -22052612 + (TG)n Simple_repeat Simple_repeat 2 70 0 627 151 11 17 chr10 118264164 118264343 -22052422 + (TG)n Simple_repeat Simple_repeat 1 178 0 2001 144 0 3 chr10 118264380 118264678 -22052087 - AluJb SINE Alu -15 297 1 216 267 0 0 chr10 118265410 118265455 -22051310 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 261 342 104 31 chr10 118265458 118265718 -22051047 - L2 LINE L2 0 3272 2994 2153 128 3 6 chr10 118265727 118266039 -22050726 + AluSx SINE Alu 1 311 -1 278 320 24 16 chr10 118266208 118266333 -22050432 + MIR SINE MIR 93 218 -44 184 237 145 13 chr10 118266494 118266570 -22050195 - MER5A DNA MER1_type -67 122 37 1756 149 0 62 chr10 118267572 118267894 -22048871 + AluJo SINE Alu 5 306 -6 2053 126 27 3 chr10 118268050 118268343 -22048422 - AluJo SINE Alu -11 301 2 194 105 26 0 chr10 118268879 118268917 -22047848 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 230 246 31 0 chr10 118269511 118269576 -22047189 - L2 LINE L2 0 3272 3206 289 109 36 0 chr10 118269970 118270025 -22046740 + (ATG)n Simple_repeat Simple_repeat 2 58 0 741 246 31 5 chr10 118270026 118270221 -22046544 - MIR SINE MIR -3 259 60 205 298 18 0 chr10 118270970 118271027 -22045738 + L2 LINE L2 3201 3258 -14 1585 153 48 44 chr10 118271030 118271324 -22045441 - AluJb SINE Alu -17 295 1 197 309 206 8 chr10 118271615 118271741 -22045024 + MIR SINE MIR 2 152 -110 364 188 0 0 chr10 118271751 118271815 -22044950 - MLT1H1 LTR MaLR -2 553 490 389 96 0 0 chr10 118271816 118271904 -22044861 - FLAM_C SINE Alu 0 152 65 1207 229 122 18 chr10 118271904 118272194 -22044571 - MLT1H1 LTR MaLR -60 495 135 2027 124 3 7 chr10 118272194 118272524 -22044241 - AluSx SINE Alu 0 329 1 1207 229 122 18 chr10 118272524 118272675 -22044090 - MLT1H1 LTR MaLR -420 135 1 239 261 43 0 chr10 118272675 118272744 -22044021 + L2 LINE L2 3185 3256 -16 292 226 75 28 chr10 118272820 118272881 -22043884 - MLT1L LTR MaLR 0 615 545 1927 103 4 0 chr10 118272881 118273133 -22043632 + AluSx SINE Alu 1 253 -59 292 226 75 28 chr10 118273133 118273177 -22043588 - MLT1L LTR MaLR -70 545 505 932 172 0 12 chr10 118273183 118273346 -22043419 + FRAM SINE Alu 11 171 -5 1140 267 81 50 chr10 118273347 118273852 -22042913 - MLT1L LTR MaLR -94 521 1 1919 160 52 40 chr10 118274079 118274147 -22042618 + L1MA7 LINE L1 5542 5608 -683 1975 142 0 19 chr10 118274147 118274464 -22042301 + AluSx SINE Alu 2 312 0 1919 160 52 40 chr10 118274464 118274925 -22041840 + L1MA7 LINE L1 5608 6109 -182 2159 112 7 13 chr10 118274925 118275229 -22041536 + AluSx SINE Alu 1 302 -10 195 349 23 0 chr10 118275931 118276060 -22040705 - MIR SINE MIR -3 259 128 1225 264 64 3 chr10 118276085 118276452 -22040313 + MLT1J2 LTR MaLR 39 490 -21 299 275 14 0 chr10 118276638 118276707 -22040058 - MLT1G LTR MaLR -520 70 1 192 286 43 14 chr10 118276707 118276777 -22039988 + L2 LINE L2 3185 3256 -16 292 226 75 28 chr10 118276853 118276914 -22039851 - MLT1L LTR MaLR 0 615 545 1927 103 4 0 chr10 118276914 118277166 -22039599 + AluSx SINE Alu 1 253 -59 292 226 75 28 chr10 118277166 118277210 -22039555 - MLT1L LTR MaLR -70 545 505 882 166 6 18 chr10 118277216 118277379 -22039386 + FRAM SINE Alu 11 171 -5 1087 268 83 50 chr10 118277380 118277884 -22038881 - MLT1L LTR MaLR -94 521 1 3139 135 108 70 chr10 118278111 118278179 -22038586 + L1MA7 LINE L1 5542 5606 -685 2010 143 0 13 chr10 118278179 118278494 -22038271 + AluSx SINE Alu 2 312 0 3139 135 108 70 chr10 118278494 118278957 -22037808 + L1MA7 LINE L1 5606 6107 -184 2140 118 3 13 chr10 118278957 118279263 -22037502 + AluSx SINE Alu 1 303 -9 3139 135 108 70 chr10 118279263 118279417 -22037348 + L1MA7 LINE L1 6107 6254 -37 261 0 0 0 chr10 118279417 118279446 -22037319 + (TG)n Simple_repeat Simple_repeat 2 30 0 1639 173 3 36 chr10 118279640 118279946 -22036819 + AluJo SINE Alu 1 296 -16 2436 87 0 0 chr10 118279964 118280262 -22036503 + AluSx SINE Alu 1 298 -14 569 136 0 39 chr10 118280265 118280368 -22036397 + FLAM_A SINE Alu 43 141 -1 1984 144 0 0 chr10 118280388 118280680 -22036085 + AluSx SINE Alu 11 302 -10 1091 158 0 0 chr10 118280680 118280845 -22035920 + AluJb SINE Alu 134 298 -14 1200 117 0 0 chr10 118280847 118281164 -22035601 + (TA)n Simple_repeat Simple_repeat 1 317 0 2340 64 0 7 chr10 118281164 118281444 -22035321 + AluY SINE Alu 25 302 -9 476 296 78 0 chr10 118281647 118281789 -22034976 + MER91A DNA MER1_type 1 153 -43 718 222 259 15 chr10 118281908 118282354 -22034411 - MLT1G1 LTR MaLR -7 588 1 394 356 17 0 chr10 118282371 118282548 -22034217 + L2 LINE L2 2924 3103 -169 2016 146 13 7 chr10 118283682 118283984 -22032781 - AluSx SINE Alu -7 305 2 520 169 0 51 chr10 118283989 118284107 -22032658 - Charlie4 DNA MER1_type 0 1961 1850 4583 251 77 31 chr10 118284113 118285351 -22031414 + L1MEc LINE L1 35 1359 -5037 1893 165 0 7 chr10 118285351 118285654 -22031111 + AluJb SINE Alu 1 301 -11 4583 251 77 31 chr10 118285654 118285951 -22030814 + L1MEc LINE L1 1359 1641 -4755 * 5689 151 15 18 chr10 118285943 118286916 -22029849 + L1MC1 LINE L1 5353 6323 -10 2244 97 3 10 chr10 118286916 118287224 -22029541 + AluSg SINE Alu 1 306 -4 2836 213 20 14 chr10 118287227 118287889 -22028876 + L1MEc LINE L1 1619 2284 -4112 2164 132 0 0 chr10 118287889 118288193 -22028572 + AluSx SINE Alu 1 304 -8 235 132 132 59 chr10 118288216 118288284 -22028481 - Charlie4 DNA MER1_type -97 1864 1792 2211 110 0 0 chr10 118288285 118288597 -22028168 + AluSx SINE Alu 1 312 0 216 111 0 0 chr10 118289026 118289062 -22027703 + (T)n Simple_repeat Simple_repeat 1 36 0 194 225 14 56 chr10 118289695 118289766 -22026999 + L2 LINE L2 3204 3271 -1 1301 233 136 19 chr10 118289853 118290033 -22026732 + L1ME3A LINE L1 4968 5125 -1045 2154 110 3 10 chr10 118290033 118290348 -22026417 + AluSx SINE Alu 1 312 0 1301 233 136 19 chr10 118290348 118290831 -22025934 + L1ME3A LINE L1 5125 5717 -453 288 195 184 11 chr10 118291003 118291090 -22025675 + L1ME3A LINE L1 5789 5890 -272 266 149 21 0 chr10 118291121 118291168 -22025597 + AluJ/FRAM SINE Alu 231 278 -24 204 40 0 0 chr10 118291209 118291234 -22025531 + (A)n Simple_repeat Simple_repeat 1 25 0 446 171 0 108 chr10 118291249 118291332 -22025433 + L1ME3A LINE L1 5893 5963 -199 2401 94 0 3 chr10 118291332 118291641 -22025124 + AluSq SINE Alu 1 308 -5 446 171 0 108 chr10 118291641 118291668 -22025097 + L1ME3A LINE L1 5963 5991 -171 598 98 0 14 chr10 118291670 118291788 -22024977 - MER53 DNA DNA 0 189 2 2330 78 3 3 chr10 118291915 118292208 -22024557 - AluY SINE Alu -18 293 1 1141 127 0 6 chr10 118292263 118292463 -22024302 - AluSg/x SINE Alu 0 327 129 1474 138 0 5 chr10 118292563 118292787 -22023978 + AluSq SINE Alu 86 308 -5 590 98 0 14 chr10 118292816 118292934 -22023831 - MER53 DNA DNA 0 189 2 225 239 100 46 chr10 118292976 118293052 -22023713 + L1ME3A LINE L1 6026 6113 -57 2253 93 7 3 chr10 118293052 118293353 -22023412 - AluY SINE Alu -9 302 1 225 239 100 46 chr10 118293353 118293406 -22023359 + L1ME3A LINE L1 6113 6162 -8 2159 127 0 0 chr10 118293408 118293735 -22023030 - AluSx SINE Alu 0 327 1 366 223 138 0 chr10 118293783 118293877 -22022888 + MIR SINE MIR 37 143 -65 2213 121 7 0 chr10 118294162 118294468 -22022297 + AluSq SINE Alu 1 308 -5 204 182 45 0 chr10 118294550 118294594 -22022171 + CT-rich Low_complexity Low_complexity 3 48 0 342 297 68 0 chr10 118295182 118295300 -22021465 - MIR SINE MIR -55 207 82 1918 160 11 0 chr10 118295561 118295890 -22020875 + AluSx SINE Alu 1 332 0 2199 114 0 0 chr10 118295891 118296366 -22020399 + AluSx SINE Alu 9 312 0 740 237 11 21 chr10 118296482 118296668 -22020097 + MER20 DNA MER1_type 36 219 0 514 299 19 21 chr10 118296921 118297122 -22019643 + MIR3 SINE MIR 15 209 -53 2049 185 40 29 chr10 118297142 118297563 -22019202 - MSTA LTR MaLR -2 426 1 1108 179 10 0 chr10 118297657 118297852 -22018913 - AluSg/x SINE Alu -1 309 113 1526 117 0 0 chr10 118297959 118298165 -22018600 + AluSg/x SINE Alu 106 311 -1 1669 192 13 23 chr10 118298445 118298577 -22018188 + AluJo SINE Alu 1 133 -179 2239 103 0 3 chr10 118298577 118298916 -22017849 + AluSx SINE Alu 1 312 0 1669 192 13 23 chr10 118298916 118299117 -22017648 + AluJo SINE Alu 133 312 0 1864 90 63 4 chr10 118299185 118299440 -22017325 - AluSx SINE Alu -7 305 36 195 129 0 0 chr10 118303052 118303083 -22013682 + (T)n Simple_repeat Simple_repeat 1 31 0 2489 42 3 0 chr10 118303199 118303487 -22013278 - AluY SINE Alu -22 289 1 250 301 72 0 chr10 118307039 118307122 -22009643 - L2 LINE L2 0 3313 3225 477 326 86 37 chr10 118307315 118307444 -22009321 - MLT1K LTR MaLR -17 571 450 2180 117 10 13 chr10 118307444 118307752 -22009013 + AluSq SINE Alu 1 307 -6 477 326 86 37 chr10 118307752 118308052 -22008713 - MLT1K LTR MaLR -138 450 121 374 271 55 28 chr10 118308617 118308736 -22008029 - MLT1I LTR MaLR -217 192 65 2611 17 40 7 chr10 118308736 118309036 -22007729 + AluY SINE Alu 1 310 -1 374 271 55 28 chr10 118309036 118309097 -22007668 - MLT1I LTR MaLR -344 65 7 197 295 90 13 chr10 118310356 118310434 -22006331 - L2 LINE L2 -25 3247 3164 297 0 0 0 chr10 118312464 118312497 -22004268 + (CA)n Simple_repeat Simple_repeat 1 33 0 24 0 0 0 chr10 118316084 118316108 -22000657 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr10 118317591 118317623 -21999142 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 349 205 167 0 chr10 118320154 118320232 -21996533 - L2 LINE L2 0 3272 3182 432 333 7 26 chr10 118321186 118321376 -21995389 - MIR3 SINE MIR -7 201 15 2111 90 4 0 chr10 118321618 118321886 -21994879 + AluSx SINE Alu 1 269 -43 452 256 6 70 chr10 118322036 118322192 -21994573 + MIR3 SINE MIR 51 196 -12 2446 235 91 19 chr10 118322316 118323043 -21993722 + MER45C DNA AcHobo 1 779 -174 1386 171 116 0 chr10 118323148 118323440 -21993325 + MER45B DNA AcHobo 715 1040 0 201 39 0 0 chr10 118324226 118324252 -21992513 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 366 292 51 15 chr10 118325289 118325426 -21991339 + MIR SINE MIR 51 192 -70 26 48 0 32 chr10 118325690 118325725 -21991040 + AT_rich Low_complexity Low_complexity 1 36 -24 2369 60 3 0 chr10 118325725 118326028 -21990737 - AluY SINE Alu 0 304 1 26 48 0 32 chr10 118326028 118326053 -21990712 + AT_rich Low_complexity Low_complexity 36 60 0 936 128 0 8 chr10 118326055 118326188 -21990577 + FLAM_C SINE Alu 2 133 0 2184 118 7 3 chr10 118326487 118326791 -21989974 + AluSx SINE Alu 1 305 -7 2469 77 0 0 chr10 118327372 118327669 -21989096 + AluSc SINE Alu 1 297 -12 183 280 140 37 chr10 118327934 118328041 -21988724 + L2 LINE L2 3136 3253 -19 486 245 54 87 chr10 118328152 118328310 -21988455 - MIR SINE MIR -79 183 30 2340 105 0 0 chr10 118328310 118328606 -21988159 + AluSg SINE Alu 1 296 -14 486 245 54 87 chr10 118328606 118328631 -21988134 - MIR SINE MIR -232 30 6 208 214 14 57 chr10 118328673 118328743 -21988022 - MIR SINE MIR -104 158 92 2251 117 3 0 chr10 118329617 118329916 -21986849 + AluSp SINE Alu 1 300 -13 300 129 300 0 chr10 118329918 118329988 -21986777 - MER53 DNA DNA -2 187 97 402 223 75 11 chr10 118330067 118330161 -21986604 - MIR SINE MIR -157 105 6 526 219 76 0 chr10 118330219 118330338 -21986427 + MIR SINE MIR 97 224 -38 2082 152 0 13 chr10 118330839 118331154 -21985611 - AluJb SINE Alu 0 312 2 1764 167 3 23 chr10 118331431 118331731 -21985034 + AluJo SINE Alu 1 294 -18 300 294 65 11 chr10 118331798 118331890 -21984875 + MIR SINE MIR 19 115 -93 2314 121 0 3 chr10 118331892 118332205 -21984560 - AluSx SINE Alu 0 312 1 510 250 7 14 chr10 118332254 118332398 -21984367 - MLT1K LTR MaLR 0 588 446 601 296 41 10 chr10 118332567 118332763 -21984002 - MLT1K LTR MaLR -359 229 28 904 178 0 0 chr10 118332952 118333087 -21983678 - AluJo SINE Alu -177 135 1 360 172 0 11 chr10 118334184 118334271 -21982494 + L1MB8 LINE L1 6093 6178 0 219 160 20 60 chr10 118335446 118335496 -21981269 + CT-rich Low_complexity Low_complexity 2 49 0 207 0 0 0 chr10 118339800 118339823 -21976942 + (T)n Simple_repeat Simple_repeat 1 23 0 197 128 0 26 chr10 118340585 118340624 -21976141 + (TTTTC)n Simple_repeat Simple_repeat 4 41 0 234 0 0 0 chr10 118340646 118340672 -21976093 + (T)n Simple_repeat Simple_repeat 1 26 0 2128 113 0 17 chr10 118344145 118344446 -21972319 - AluSq SINE Alu -17 296 1 2323 75 3 25 chr10 118344457 118344775 -21971990 - AluSp SINE Alu -2 311 1 219 69 0 0 chr10 118345336 118345365 -21971400 + (TG)n Simple_repeat Simple_repeat 1 29 0 2112 125 0 0 chr10 118346047 118346352 -21970413 - AluSq SINE Alu -8 305 1 261 0 0 0 chr10 118347795 118347824 -21968941 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 660 111 0 0 chr10 118348169 118348268 -21968497 + (TGG)n Simple_repeat Simple_repeat 1 99 0 519 45 0 0 chr10 118349065 118349131 -21967634 + (TG)n Simple_repeat Simple_repeat 1 66 0 2099 95 0 3 chr10 118349345 118349628 -21967137 + AluSq SINE Alu 1 282 -31 273 29 0 0 chr10 118349631 118349665 -21967100 + (TA)n Simple_repeat Simple_repeat 2 35 0 2465 37 3 3 chr10 118351094 118351393 -21965372 - AluSp SINE Alu -14 299 1 373 227 0 59 chr10 118351453 118351572 -21965193 - L1ME3 LINE L1 -3 6159 6048 616 248 19 63 chr10 118351578 118351659 -21965106 - MER58A DNA MER1_type -2198 222 139 2189 111 66 84 chr10 118351659 118352035 -21964730 + Tigger2a DNA MER2_type 1 369 -2339 2002 120 3 3 chr10 118352035 118352336 -21964429 - AluY SINE Alu -10 301 1 2189 111 66 84 chr10 118352336 118352401 -21964364 + Tigger2a DNA MER2_type 369 434 0 616 248 19 63 chr10 118352401 118352525 -21964240 - MER58A DNA MER1_type -2281 139 26 1288 244 40 17 chr10 118352549 118353002 -21963763 - L1ME2 LINE L1 -199 5965 5592 192 77 0 0 chr10 118353621 118353647 -21963118 + (TG)n Simple_repeat Simple_repeat 1 26 0 434 156 165 28 chr10 118354531 118354640 -21962125 - L2 LINE L2 -1 3312 3189 32 0 0 0 chr10 118354640 118354672 -21962093 + AT_rich Low_complexity Low_complexity 1 32 0 1716 132 0 47 chr10 118354743 118355062 -21961703 - AluSx SINE Alu -6 306 3 2161 112 0 0 chr10 118355073 118355367 -21961398 - AluSx SINE Alu -18 294 1 846 123 0 0 chr10 118355371 118355501 -21961264 - AluSg/x SINE Alu -8 302 173 1866 140 0 3 chr10 118355938 118356224 -21960541 - AluJo SINE Alu -26 286 2 308 202 269 29 chr10 118356288 118356392 -21960373 - MIR SINE MIR -103 159 31 286 189 8 142 chr10 118356470 118356583 -21960182 - MER5B DNA MER1_type 0 178 82 326 303 146 0 chr10 118356583 118356748 -21960017 - MER5A DNA MER1_type 0 189 1 461 292 23 29 chr10 118356756 118356927 -21959838 + MER5B DNA MER1_type 1 170 -8 1911 130 3 3 chr10 118357044 118357344 -21959421 - AluSx SINE Alu -12 300 1 294 78 39 20 chr10 118357344 118357395 -21959370 - AluJb SINE Alu -167 135 84 190 298 53 32 chr10 118357401 118357495 -21959270 - MIR SINE MIR -65 143 48 2261 82 3 7 chr10 118357891 118358197 -21958568 - AluSg1 SINE Alu -4 305 1 21 0 0 0 chr10 118358242 118358263 -21958502 + AT_rich Low_complexity Low_complexity 1 21 0 198 103 0 0 chr10 118358420 118358449 -21958316 + (T)n Simple_repeat Simple_repeat 1 29 0 1630 123 9 82 chr10 118408750 118409066 -21907699 + AluJo SINE Alu 11 303 -9 621 198 193 32 chr10 118410120 118410307 -21906458 + MER20 DNA MER1_type 1 217 -2 554 217 147 16 chr10 118410359 118410510 -21906255 - FRAM SINE Alu 0 168 1 2230 94 0 0 chr10 118410542 118410841 -21905924 + AluSq SINE Alu 11 309 -4 2151 92 0 0 chr10 118411229 118411513 -21905252 + AluSx SINE Alu 21 304 -8 1610 191 0 0 chr10 118411513 118411790 -21904975 - AluJo SINE Alu -31 281 4 193 163 116 0 chr10 118412519 118412562 -21904203 + MIR SINE MIR 106 153 -109 2103 122 19 77 chr10 118412701 118413045 -21903720 - L1MB8 LINE L1 -28 6150 5834 1781 120 65 0 chr10 118413045 118413214 -21903551 - AluSx SINE Alu -1 311 114 446 0 0 18 chr10 118413214 118413269 -21903496 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1781 120 65 0 chr10 118413269 118413391 -21903374 - AluSx SINE Alu -198 114 1 2103 122 19 77 chr10 118413391 118413473 -21903292 - L1MB8 LINE L1 -344 5834 5749 1253 152 140 30 chr10 118413758 118414022 -21902743 - AluJo SINE Alu -13 299 7 2190 110 0 3 chr10 118414181 118414489 -21902276 - AluSx SINE Alu -5 307 1 2037 118 3 0 chr10 118415020 118415309 -21901456 - AluSx SINE Alu -19 293 4 254 123 27 27 chr10 118415395 118415468 -21901297 + (CA)n Simple_repeat Simple_repeat 2 74 0 1991 91 0 39 chr10 118417196 118417482 -21899283 - AluSx SINE Alu -26 286 12 198 0 0 0 chr10 118417953 118417975 -21898790 + (TG)n Simple_repeat Simple_repeat 1 22 0 306 0 0 0 chr10 118418615 118418649 -21898116 + (CA)n Simple_repeat Simple_repeat 2 35 0 251 360 93 22 chr10 118419254 118419393 -21897372 + MIR3 SINE MIR 45 193 -15 1320 288 60 48 chr10 118419465 118419965 -21896800 - MLT2B1 LTR ERVL 0 520 15 1943 97 6 59 chr10 118419965 118420285 -21896480 + AluSx SINE Alu 1 303 -9 1356 193 37 30 chr10 118420429 118420725 -21896040 - AluJo SINE Alu -14 298 1 672 206 88 6 chr10 118421624 118421794 -21894971 - MLT1K LTR MaLR -36 552 369 450 283 40 20 chr10 118421879 118422031 -21894734 - MLT1K LTR MaLR -411 177 23 653 228 51 28 chr10 118423656 118423871 -21892894 + MIR SINE MIR 42 261 -1 1390 174 110 50 chr10 118424031 118424313 -21892452 + AluJo SINE Alu 2 300 -2 269 136 153 0 chr10 118424337 118424396 -21892369 - MER116 DNA Mariner 0 80 13 2007 102 7 0 chr10 118425978 118426263 -21890502 - AluY SINE Alu -24 287 1 1929 133 20 0 chr10 118426263 118426557 -21890208 - AluSx SINE Alu -12 300 1 1931 91 51 15 chr10 118426806 118427080 -21889685 + AluSg SINE Alu 1 284 -26 337 254 0 0 chr10 118427657 118427728 -21889037 + MIR SINE MIR 68 138 -124 1768 114 57 4 chr10 118427954 118428218 -21888547 + AluSg SINE Alu 1 278 -32 195 303 212 0 chr10 118428332 118428431 -21888334 + MIR SINE MIR 31 150 -58 542 279 10 56 chr10 118428485 118428682 -21888083 - MIR SINE MIR -11 251 64 357 320 199 7 chr10 118429911 118430192 -21886573 - L1ME4a LINE L1 -69 6052 5718 1899 115 54 10 chr10 118430192 118430487 -21886278 + AluSx SINE Alu 1 308 -4 2087 109 30 3 chr10 118432726 118433029 -21883736 + AluSx SINE Alu 1 311 -1 2263 103 7 0 chr10 118433125 118433435 -21883330 + AluSx SINE Alu 1 312 0 22 43 0 21 chr10 118433754 118433780 -21882985 + AT_rich Low_complexity Low_complexity 1 27 -19 2299 82 0 3 chr10 118433780 118434086 -21882679 + AluSg SINE Alu 1 305 -5 22 43 0 21 chr10 118434086 118434106 -21882659 + AT_rich Low_complexity Low_complexity 27 46 0 284 226 118 39 chr10 118434134 118434236 -21882529 - L1MD2 LINE L1 -228 6131 6022 2118 92 3 0 chr10 118436149 118436433 -21880332 + AluSp SINE Alu 1 285 -28 1574 180 17 7 chr10 118436621 118436910 -21879855 + AluJo SINE Alu 1 292 -20 2389 61 0 3 chr10 118436916 118437213 -21879552 + AluY SINE Alu 1 296 -15 1899 86 100 4 chr10 118437217 118437497 -21879268 + AluSx SINE Alu 6 312 0 420 309 109 0 chr10 118437552 118437727 -21879038 + MIR SINE MIR 15 208 -54 1999 117 0 3 chr10 118437769 118438067 -21878698 - AluSx SINE Alu -1 311 15 211 403 14 0 chr10 118438164 118438303 -21878462 - MIR SINE MIR 0 262 122 * 532 266 69 44 chr10 118438302 118438505 -21878260 - MIR SINE MIR -2 260 53 203 79 26 0 chr10 118438718 118438756 -21878009 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 238 319 53 9 chr10 118440518 118440631 -21876134 - L2 LINE L2 -5 3308 3191 392 254 81 81 chr10 118441567 118441764 -21875001 - MIR3 SINE MIR -3 205 9 2379 62 0 34 chr10 118442817 118443139 -21873626 + AluY SINE Alu 1 311 0 478 280 48 0 chr10 118444569 118444694 -21872071 + MIR SINE MIR 20 150 -112 1864 125 3 22 chr10 118444728 118445040 -21871725 - AluSx SINE Alu 0 312 7 189 0 0 0 chr10 118445725 118445746 -21871019 + (T)n Simple_repeat Simple_repeat 1 21 0 514 207 67 59 chr10 118446621 118446756 -21870009 + L2 LINE L2 3178 3313 0 1846 169 0 0 chr10 118446867 118447147 -21869618 + AluJb SINE Alu 3 311 0 213 0 0 35 chr10 118447147 118447176 -21869589 + (TAAA)n Simple_repeat Simple_repeat 1 180 0 183 205 0 0 chr10 118447692 118447731 -21869034 + (CA)n Simple_repeat Simple_repeat 1 39 0 816 11 0 0 chr10 118452721 118452814 -21863951 + (TC)n Simple_repeat Simple_repeat 2 94 0 26 0 0 0 chr10 118453334 118453360 -21863405 + AT_rich Low_complexity Low_complexity 1 26 0 309 26 0 0 chr10 118453875 118453913 -21862852 + (TG)n Simple_repeat Simple_repeat 2 39 0 312 94 0 0 chr10 118453998 118454051 -21862714 + (T)n Simple_repeat Simple_repeat 1 53 0 445 144 22 0 chr10 118457061 118457151 -21859614 + (CA)n Simple_repeat Simple_repeat 1 92 0 21 36 0 0 chr10 118462083 118462111 -21854654 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 118462139 118462160 -21854605 + GC_rich Low_complexity Low_complexity 1 21 0 29 60 0 0 chr10 118462240 118462290 -21854475 + GC_rich Low_complexity Low_complexity 1 50 0 236 30 30 0 chr10 118462458 118462491 -21854274 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 202 0 59 29 chr10 118462902 118462936 -21853829 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 189 0 0 0 chr10 118463221 118463242 -21853523 + (T)n Simple_repeat Simple_repeat 1 21 0 219 69 0 0 chr10 118464294 118464323 -21852442 + (TC)n Simple_repeat Simple_repeat 2 30 0 29 0 0 0 chr10 118464840 118464869 -21851896 + AT_rich Low_complexity Low_complexity 1 29 0 2435 70 0 0 chr10 118466107 118466420 -21850345 - AluSq SINE Alu 0 313 1 223 268 56 0 chr10 118471509 118471580 -21845185 + MIR SINE MIR 159 233 -29 336 283 42 17 chr10 118472700 118472820 -21843945 - MIR SINE MIR -16 246 124 24 0 0 0 chr10 118473956 118473980 -21842785 + AT_rich Low_complexity Low_complexity 1 24 0 215 284 0 15 chr10 118474591 118474658 -21842107 + CT-rich Low_complexity Low_complexity 2 67 0 221 178 0 22 chr10 118475167 118475212 -21841553 + A-rich Low_complexity Low_complexity 47 90 0 187 265 0 0 chr10 118477237 118477286 -21839479 - MIR SINE MIR -108 154 106 207 0 0 0 chr10 118477352 118477375 -21839390 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1886 128 49 0 chr10 118477378 118477644 -21839121 - AluSg SINE Alu -31 279 1 495 33 0 0 chr10 118479443 118479504 -21837261 + (TG)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr10 118480469 118480492 -21836273 + AT_rich Low_complexity Low_complexity 1 23 0 1244 195 20 79 chr10 118481894 118482237 -21834528 - MER33 DNA MER1_type -1 323 1 186 103 0 0 chr10 118484304 118484333 -21832432 + (CA)n Simple_repeat Simple_repeat 2 30 0 192 77 0 0 chr10 118484344 118484370 -21832395 + (TCTCCC)n Simple_repeat Simple_repeat 3 28 0 451 222 36 11 chr10 118488931 118489088 -21827677 - MLT1J2 LTR MaLR -189 220 48 582 223 31 0 chr10 118489812 118489942 -21826823 - MER91C DNA MER1_type -1 139 6 22 0 0 0 chr10 118490335 118490357 -21826408 + AT_rich Low_complexity Low_complexity 1 22 0 2419 94 0 3 chr10 118491458 118491766 -21824999 - AluSc SINE Alu 0 309 3 753 274 63 8 chr10 118492126 118492363 -21824402 + MIR SINE MIR 2 251 -11 2115 135 3 0 chr10 118492460 118492772 -21823993 - AluSq SINE Alu 0 313 1 205 261 0 0 chr10 118494220 118494285 -21822480 + T-rich Low_complexity Low_complexity 1 65 0 224 241 0 0 chr10 118494485 118494539 -21822226 + T-rich Low_complexity Low_complexity 1 54 0 183 184 0 0 chr10 118494744 118494782 -21821983 + T-rich Low_complexity Low_complexity 2 39 0 191 88 29 0 chr10 118495146 118495180 -21821585 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 * 224 200 18 0 chr10 118495175 118495230 -21821535 + CT-rich Low_complexity Low_complexity 1 56 0 280 288 0 0 chr10 118495701 118495812 -21820953 + T-rich Low_complexity Low_complexity 1 111 0 198 103 0 0 chr10 118498364 118498393 -21818372 + (A)n Simple_repeat Simple_repeat 1 29 0 180 231 0 0 chr10 118498778 118498830 -21817935 + CT-rich Low_complexity Low_complexity 4 55 0 292 210 40 10 chr10 118500073 118500173 -21816592 + T-rich Low_complexity Low_complexity 4 106 0 252 77 0 0 chr10 118500401 118500440 -21816325 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 118501590 118501611 -21815154 + AT_rich Low_complexity Low_complexity 1 21 0 183 266 47 0 chr10 118504048 118504112 -21812653 + L2 LINE L2 2653 2719 -595 386 258 77 91 chr10 118504127 118504336 -21812429 - MIR SINE MIR -39 223 18 1228 148 9 23 chr10 118504675 118504892 -21811873 - MER20 DNA MER1_type -4 215 2 231 284 28 18 chr10 118504905 118505014 -21811751 + L2 LINE L2 3203 3312 -1 1285 224 131 47 chr10 118505620 118506085 -21810680 - MLT1D LTR MaLR -1 504 1 275 299 68 20 chr10 118506329 118506476 -21810289 + MIR SINE MIR 34 187 -75 2170 95 0 37 chr10 118506559 118506854 -21809911 - AluSx SINE Alu -3 309 26 276 238 16 0 chr10 118507431 118507494 -21809271 - L2 LINE L2 -1 3312 3249 469 338 60 5 chr10 118507663 118507864 -21808901 - MIR SINE MIR -48 214 3 320 213 62 56 chr10 118508150 118508244 -21808521 - MER112 DNA MER1_type -7 253 161 2097 141 0 3 chr10 118508244 118508548 -21808217 + AluSx SINE Alu 1 303 -9 320 213 62 56 chr10 118508548 118508656 -21808109 - MER112 DNA MER1_type -99 161 4 399 220 73 27 chr10 118508840 118508990 -21807775 - MER103 DNA DNA -7 159 3 237 259 111 19 chr10 118509064 118509172 -21807593 - MIR SINE MIR -51 211 94 240 243 0 122 chr10 118509200 118509307 -21807458 - MLT1F1 LTR MaLR 0 567 474 418 299 60 30 chr10 118509424 118509591 -21807174 - MLT1H LTR MaLR -326 223 52 301 292 0 0 chr10 118509666 118509755 -21807010 - MIR SINE MIR -64 198 110 724 249 12 0 chr10 118509761 118509934 -21806831 - L1M4 LINE L1 -1997 4149 3975 1930 97 0 0 chr10 118509938 118510175 -21806590 - AluSq SINE Alu -76 237 1 428 221 28 18 chr10 118510206 118510369 -21806396 + L1ME LINE L1 5176 5330 -816 421 246 32 33 chr10 118510395 118510561 -21806204 + L1ME LINE L1 5638 5798 -364 252 206 10 82 chr10 118511416 118511513 -21805252 - MIR SINE MIR -77 131 42 255 297 101 59 chr10 118511717 118511936 -21804829 - MIR SINE MIR -22 240 13 228 208 21 0 chr10 118514366 118514414 -21802351 - L2 LINE L2 -257 3056 3008 184 171 0 0 chr10 118514543 118514578 -21802187 - MIR SINE MIR -117 145 111 1502 208 28 9 chr10 118514655 118514972 -21801793 - L1MB7 LINE L1 0 6184 5862 702 175 28 28 chr10 118515047 118515129 -21801636 - MER106B DNA MER1_type -911 148 64 465 97 0 0 chr10 118515129 118515201 -21801564 + (TA)n Simple_repeat Simple_repeat 2 73 0 702 175 28 28 chr10 118515201 118515261 -21801504 - MER106B DNA MER1_type -994 65 6 404 259 10 27 chr10 118515262 118515431 -21801334 - L1MB7 LINE L1 -310 5864 5700 1965 122 0 11 chr10 118516527 118516805 -21799960 - AluSx SINE Alu 0 312 38 400 301 65 0 chr10 118516867 118517020 -21799745 + MIR SINE MIR 8 170 -92 1318 196 116 45 chr10 118517805 118518108 -21798657 + MER63B DNA MER1_type 4 345 -717 1989 112 59 11 chr10 118518108 118518395 -21798370 - AluSx SINE Alu -11 301 1 1318 196 116 45 chr10 118518395 118518495 -21798270 + MER63B DNA MER1_type 345 436 0 347 289 147 38 chr10 118520299 118520510 -21796255 + MIR SINE MIR 29 262 0 249 306 66 9 chr10 118520584 118520737 -21796028 - MIR SINE MIR -61 147 31 384 271 9 0 chr10 118521095 118521202 -21795563 - L1ME1 LINE L1 -8 6158 6051 1329 156 100 40 chr10 118521204 118521454 -21795311 + AluJb SINE Alu 1 265 -47 281 153 0 17 chr10 118521455 118521514 -21795251 + (CA)n Simple_repeat Simple_repeat 2 59 0 253 281 0 0 chr10 118521514 118521603 -21795162 + L1MC4 LINE L1 6614 6702 -1340 224 233 0 0 chr10 118521605 118521648 -21795117 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2364 216 52 2 chr10 118521692 118522214 -21794551 - L1ME1 LINE L1 -173 5993 5446 317 311 67 0 chr10 118523327 118523417 -21793348 - MER91A DNA MER1_type -14 182 87 1080 276 89 96 chr10 118523992 118524210 -21792555 + L2 LINE L2 1995 2213 -1100 1655 171 44 41 chr10 118524210 118524572 -21792193 - MLT1A1 LTR MaLR -2 363 1 1080 276 89 96 chr10 118524572 118525378 -21791387 + L2 LINE L2 2213 3007 -306 2171 103 7 0 chr10 118525378 118525668 -21791097 - AluSg SINE Alu -18 292 1 1080 276 89 96 chr10 118525668 118525973 -21790792 + L2 LINE L2 3007 3313 0 219 319 14 0 chr10 118526380 118526452 -21790313 + GA-rich Low_complexity Low_complexity 6 78 0 244 271 186 17 chr10 118526705 118526823 -21789942 - MIR3 SINE MIR -62 146 9 351 308 122 18 chr10 118527613 118527834 -21788931 - MIR SINE MIR -2 260 17 455 236 79 56 chr10 118528096 118528274 -21788491 + MIR SINE MIR 15 196 -66 1098 218 66 58 chr10 118528868 118529230 -21787535 - MLT1A1 LTR MaLR 0 365 1 398 266 0 37 chr10 118529615 118529724 -21787041 + L2 LINE L2 3208 3312 -1 933 286 48 44 chr10 118529752 118530249 -21786516 - L1ME4a LINE L1 -180 5941 5443 465 292 118 44 chr10 118530278 118530668 -21786097 - L3 LINE CR1 -193 1384 966 21 36 0 0 chr10 118530683 118530711 -21786054 + AT_rich Low_complexity Low_complexity 1 28 0 358 190 113 35 chr10 118530862 118531004 -21785761 - L1ME4a LINE L1 -240 5881 5729 916 217 6 0 chr10 118531004 118531179 -21785586 - FRAM SINE Alu 0 40 1 353 238 82 25 chr10 118531191 118531340 -21785425 - L1ME4a LINE L1 -460 5661 5561 867 296 114 26 chr10 118531735 118532391 -21784374 - HAL1 LINE L1 -741 1766 1053 198 0 0 0 chr10 118532413 118532435 -21784330 + (T)n Simple_repeat Simple_repeat 1 22 0 1542 166 0 50 chr10 118532608 118532886 -21783879 + AluJb SINE Alu 25 288 -24 249 341 18 88 chr10 118532963 118533133 -21783632 + LTR33A LTR ERVL 1 158 -365 391 199 55 48 chr10 118533389 118533535 -21783230 + LTR33A LTR ERVL 377 523 0 807 274 71 29 chr10 118533614 118534034 -21782731 + L1M4 LINE L1 4409 4846 -1300 818 228 21 93 chr10 118534075 118534408 -21782357 - L1M4 LINE L1 -2392 3754 3446 1115 317 47 22 chr10 118534420 118534868 -21781897 + L1M3c LINE L1 898 1356 -5681 2868 193 55 39 chr10 118534875 118535591 -21781174 + L1M3c LINE L1 1722 2454 -4583 2527 69 0 22 chr10 118535591 118535909 -21780856 + AluY SINE Alu 1 311 0 2868 193 55 39 chr10 118535909 118535979 -21780786 + L1M3c LINE L1 2454 2521 -4516 32 0 0 0 chr10 118536009 118536041 -21780724 + AT_rich Low_complexity Low_complexity 1 32 0 21705 150 40 18 chr10 118536083 118537799 -21778966 + L1 LINE L1 16 1693 -5872 365 0 22 0 chr10 118537799 118537844 -21778921 + (CA)n Simple_repeat Simple_repeat 1 46 0 243 0 0 0 chr10 118537843 118537870 -21778895 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 21705 150 40 18 chr10 118537844 118541012 -21775753 + L1 LINE L1 1693 4986 -2579 1392 215 0 0 chr10 118540996 118541289 -21775476 + L1 LINE L1 6523 6815 -750 * 6643 137 30 7 chr10 118541284 118543319 -21773446 + L1MA2 LINE L1 4220 6304 0 6317 243 59 15 chr10 118543316 118545835 -21770930 + L1M1 LINE L1 2678 5306 -2259 * 1201 230 54 12 chr10 118545835 118546243 -21770522 - L1ME LINE L1 -2686 3394 2970 305 140 18 0 chr10 118546243 118546300 -21770465 + CT-rich Low_complexity Low_complexity 4 61 0 366 80 0 0 chr10 118546305 118546355 -21770410 + (TCTCC)n Simple_repeat Simple_repeat 1 50 0 23 68 0 0 chr10 118546358 118546402 -21770363 + GC_rich Low_complexity Low_complexity 1 44 0 223 233 0 17 chr10 118546466 118546526 -21770239 + C-rich Low_complexity Low_complexity 2 60 0 23 0 0 0 chr10 118546537 118546560 -21770205 + GC_rich Low_complexity Low_complexity 1 23 0 600 116 0 0 chr10 118546671 118546766 -21769999 + (TCCCC)n Simple_repeat Simple_repeat 3 97 0 1416 225 46 0 chr10 118546768 118546928 -21769837 - AluJo SINE Alu -17 295 115 185 0 40 0 chr10 118546928 118546953 -21769812 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1416 225 46 0 chr10 118546953 118547072 -21769693 - AluJo SINE Alu -197 115 3 229 204 19 0 chr10 118547079 118547133 -21769632 - L1ME LINE L1 -3104 2976 2922 1995 203 39 53 chr10 118547133 118547600 -21769165 + MLT1D LTR MaLR 1 460 -45 1928 163 97 11 chr10 118547600 118547962 -21768803 + MSTD LTR MaLR 1 393 -3 359 113 0 0 chr10 118547962 118548011 -21768754 + MLT1D LTR MaLR 457 505 0 256 144 89 44 chr10 118548012 118548102 -21768663 - L1ME LINE L1 -3155 2925 2832 976 239 73 83 chr10 118548102 118548499 -21768266 - MER21B LTR ERV1 -62 801 409 1338 233 47 22 chr10 118548526 118548848 -21767917 - MER21B LTR ERV1 -533 330 1 2177 265 75 44 chr10 118548848 118549912 -21766853 - L1ME LINE L1 -3246 2834 1804 2220 172 16 41 chr10 118549912 118550354 -21766411 + MSTB1 LTR MaLR 2 432 0 2177 265 75 44 chr10 118550354 118551973 -21764792 - L1ME LINE L1 -4276 1804 13 411 38 0 0 chr10 118552036 118552089 -21764676 + (CA)n Simple_repeat Simple_repeat 2 54 0 203 170 45 62 chr10 118552089 118552201 -21764564 + (CTTAT)n Simple_repeat Simple_repeat 4 113 0 1851 139 7 39 chr10 118552430 118552740 -21764025 - AluJo SINE Alu -12 300 1 528 289 75 10 chr10 118552827 118553132 -21763633 - HAL1 LINE L1 -860 1647 1323 255 256 13 39 chr10 118555016 118555094 -21761671 - MIR SINE MIR -80 182 107 255 61 0 0 chr10 118555547 118555580 -21761185 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 1952 128 39 7 chr10 118555580 118555853 -21760912 - AluSq SINE Alu -28 285 1 1126 289 66 36 chr10 118555872 118556339 -21760426 + MLT1K LTR MaLR 88 568 -20 501 227 80 40 chr10 118556342 118556518 -21760247 + MER63A DNA MER1_type 27 209 -1 297 191 44 0 chr10 118557091 118557159 -21759606 + MIR SINE MIR 113 183 -79 639 218 8 16 chr10 118560319 118560443 -21756322 - FLAM_A SINE Alu -10 123 1 630 214 119 94 chr10 118560467 118560869 -21755896 - L1ME4a LINE L1 -5 6116 5705 193 339 86 35 chr10 118561147 118561486 -21755279 - L2 LINE L2 -539 2775 2420 224 317 19 29 chr10 118561491 118561595 -21755170 - MIR SINE MIR -75 133 31 249 33 0 0 chr10 118561800 118561830 -21754935 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2098 126 0 14 chr10 118563455 118563796 -21752969 + AluSx SINE Alu 1 312 0 2153 105 17 0 chr10 118564343 118564637 -21752128 - AluSx SINE Alu -13 299 1 488 190 5 155 chr10 118566078 118566236 -21750529 + MER5B DNA MER1_type 9 133 -45 2185 128 0 0 chr10 118566236 118566540 -21750225 + AluSx SINE Alu 1 304 -8 488 190 5 155 chr10 118566540 118566581 -21750184 + MER5B DNA MER1_type 132 178 0 386 189 221 16 chr10 118566600 118566727 -21750038 - MER5A DNA MER1_type -28 161 9 1952 157 0 25 chr10 118566975 118567293 -21749472 + AluJb SINE Alu 1 310 -2 212 230 35 58 chr10 118567402 118567489 -21749276 - L2 LINE L2 -1 3271 3187 496 293 84 11 chr10 118567678 118567869 -21748896 - MIR SINE MIR -6 256 52 222 62 0 0 chr10 118567997 118568029 -21748736 + (T)n Simple_repeat Simple_repeat 1 32 0 253 282 92 38 chr10 118568337 118568468 -21748297 - MIR SINE MIR -123 139 2 680 259 75 32 chr10 118568637 118568948 -21747817 + LTR16C LTR ERVL 145 489 -2 1859 151 3 47 chr10 118569040 118569358 -21747407 - AluJb SINE Alu -8 304 1 1410 139 36 193 chr10 118570120 118570565 -21746200 + THE1C LTR MaLR 1 375 0 181 204 20 41 chr10 118570569 118570618 -21746147 - L2 LINE L2 -39 3233 3186 326 314 104 30 chr10 118570736 118571025 -21745740 - L2 LINE L2 -188 3084 2772 216 242 61 0 chr10 118571288 118571354 -21745411 + MIR3 SINE MIR 100 169 -39 2103 130 10 0 chr10 118571412 118571712 -21745053 + AluSx SINE Alu 1 303 -9 239 308 38 23 chr10 118571893 118572026 -21744739 + MIR3 SINE MIR 63 197 -11 1671 224 73 63 chr10 118573192 118573222 -21743543 - L1MC5 LINE L1 -48 7913 7885 3065 175 28 32 chr10 118573222 118573277 -21743488 + L1MB8 LINE L1 5532 5586 -592 2285 87 0 0 chr10 118573277 118573563 -21743202 - AluY SINE Alu -5 306 21 3065 175 28 32 chr10 118573563 118574157 -21742608 + L1MB8 LINE L1 5586 6178 0 1671 224 73 63 chr10 118574157 118574431 -21742334 - L1MC5 LINE L1 -76 7885 7615 2020 132 0 0 chr10 118574431 118574736 -21742029 - AluSx SINE Alu 0 305 1 1671 224 73 63 chr10 118574736 118575033 -21741732 - L1MC5 LINE L1 -346 7615 7304 390 282 57 24 chr10 118575467 118575591 -21741174 - L2 LINE L2 -1 3271 3144 547 238 20 7 chr10 118575835 118575982 -21740783 + MIR SINE MIR 66 214 -48 888 185 35 75 chr10 118576218 118576445 -21740320 + MER20 DNA MER1_type 2 219 0 493 196 0 0 chr10 118576463 118576555 -21740210 + MER5A DNA MER1_type 11 102 -87 770 188 5 83 chr10 118576622 118576814 -21739951 + MER5B DNA MER1_type 2 178 0 342 308 41 77 chr10 118577940 118578109 -21738656 + LTR67 LTR ERVL 16 178 -379 196 250 155 115 chr10 118578435 118578635 -21738130 - L2 LINE L2 -536 2778 2571 195 42 0 0 chr10 118581235 118581259 -21735506 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 313 283 0 40 chr10 118582053 118582152 -21734613 + MIR3 SINE MIR 90 184 -24 228 362 67 9 chr10 118582759 118582864 -21733901 + MIR3 SINE MIR 45 155 -53 378 377 34 0 chr10 118583760 118583972 -21732793 - MIR SINE MIR -10 252 35 578 300 57 18 chr10 118584203 118584430 -21732335 - MIR SINE MIR -25 237 2 459 277 115 61 chr10 118584441 118584849 -21731916 - L2 LINE L2 -1 3312 2883 530 218 102 20 chr10 118584858 118585005 -21731760 - MER45A DNA AcHobo -17 161 3 411 21 0 0 chr10 118585604 118585652 -21731113 + (TA)n Simple_repeat Simple_repeat 2 49 0 1143 123 11 21 chr10 118586164 118586351 -21730414 + AluSg/x SINE Alu 122 306 -6 2695 46 0 0 chr10 118586401 118586708 -21730057 + AluY SINE Alu 1 307 -4 1956 98 7 25 chr10 118587371 118587645 -21729120 + AluSx SINE Alu 36 304 -8 2287 114 0 0 chr10 118588550 118588848 -21727917 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr10 118639389 118639412 -21677353 + (CAT)n Simple_repeat Simple_repeat 3 25 0 188 345 35 18 chr10 118639485 118639598 -21677167 - MIR SINE MIR -123 139 25 292 153 208 0 chr10 118640432 118640504 -21676261 + MER103 DNA DNA 8 94 -72 220 253 108 0 chr10 118640697 118640780 -21675985 + MIR SINE MIR 109 200 -62 210 320 60 30 chr10 118640891 118640991 -21675774 + L2 LINE L2 3137 3239 -33 719 272 102 38 chr10 118641178 118641649 -21675116 - L1ME4a LINE L1 -2 6119 5619 1025 255 5 5 chr10 118641720 118641936 -21674829 + MER58A DNA MER1_type 2 217 -7 2012 119 3 21 chr10 118641973 118642258 -21674507 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr10 118642261 118642300 -21674465 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 276 302 10 10 chr10 118642529 118642625 -21674140 + MIR SINE MIR 2 97 -165 2056 144 29 27 chr10 118642756 118643130 -21673635 - THE1C LTR MaLR 0 375 1 26 50 0 0 chr10 118644136 118644176 -21672589 + AT_rich Low_complexity Low_complexity 1 40 0 1180 305 48 10 chr10 118645700 118646116 -21670649 + LTR16A LTR ERVL 7 438 -12 347 272 20 54 chr10 118646495 118646642 -21670123 + MIR SINE MIR 41 182 -80 317 318 131 17 chr10 118646816 118646992 -21669773 + MIR SINE MIR 23 218 -44 391 289 33 8 chr10 118647039 118647160 -21669605 + MIR SINE MIR 59 182 -80 2277 96 0 0 chr10 118647197 118647490 -21669275 - AluY SINE Alu -18 293 1 181 269 19 0 chr10 118648682 118648734 -21668031 + MIR SINE MIR 92 144 -64 1628 137 10 55 chr10 118648930 118649279 -21667486 - L1MB1 LINE L1 -3 6165 5802 2260 88 17 0 chr10 118649279 118649574 -21667191 - AluY SINE Alu -11 300 1 1628 137 10 55 chr10 118649574 118650085 -21666680 - L1MB1 LINE L1 -366 5802 5093 489 291 95 22 chr10 118651193 118651372 -21665393 - MIR SINE MIR -43 219 28 672 219 53 35 chr10 118651501 118651581 -21665184 - MER45A DNA AcHobo -1404 177 100 1968 130 37 0 chr10 118651581 118651881 -21664884 + AluSx SINE Alu 1 311 -1 672 219 53 35 chr10 118651881 118651969 -21664796 - MER45A DNA AcHobo -1481 100 6 328 287 107 88 chr10 118652744 118653072 -21663693 - L2 LINE L2 -35 3237 2904 224 204 82 0 chr10 118653094 118653143 -21663622 - L2 LINE L2 -5 3267 3215 1601 180 114 17 chr10 118653394 118653736 -21663029 + MER57A LTR ERV1 8 388 -15 1649 200 3 0 chr10 118653736 118654046 -21662719 - AluJb SINE Alu -1 311 1 1601 180 114 17 chr10 118654046 118654064 -21662701 + MER57A LTR ERV1 388 403 0 824 298 107 14 chr10 118654064 118654430 -21662335 - MLT1J LTR MaLR -108 403 4 201 349 36 0 chr10 118654988 118655071 -21661694 - MER5A DNA MER1_type 0 189 104 2177 111 0 0 chr10 118655074 118655380 -21661385 - AluSx SINE Alu -6 306 1 259 270 0 16 chr10 118655638 118655701 -21661064 - MIR SINE MIR -115 147 86 516 252 26 0 chr10 118655816 118655931 -21660834 + MER5A DNA MER1_type 72 189 0 387 303 28 7 chr10 118656134 118656279 -21660486 + MIR3 SINE MIR 37 184 -24 246 106 0 85 chr10 118656520 118656546 -21660219 + L1MB4 LINE L1 5441 5463 -703 3657 184 15 8 chr10 118656546 118657270 -21659495 + L1MB4 LINE L1 5446 6174 -6 246 106 0 85 chr10 118657270 118657290 -21659475 + L1MB4 LINE L1 5463 5483 -683 2127 119 0 0 chr10 118658667 118658970 -21657795 - AluSx SINE Alu -9 303 1 613 333 25 8 chr10 118659128 118659365 -21657400 + MIR SINE MIR 11 251 -11 2632 90 28 3 chr10 118660219 118660574 -21656191 - THE1B LTR MaLR 0 364 1 768 241 54 60 chr10 118660867 118661076 -21655689 - L1MC4 LINE L1 -3 8039 7831 2139 96 7 0 chr10 118661076 118661369 -21655396 - AluY SINE Alu -16 295 1 768 241 54 60 chr10 118661369 118661495 -21655270 - L1MC4 LINE L1 -211 7831 7706 2281 154 56 22 chr10 118661496 118661905 -21654860 - MSTB1 LTR MaLR 0 432 10 766 215 48 85 chr10 118661922 118662222 -21654543 - L1MC4 LINE L1 -195 7674 7332 551 160 337 12 chr10 118662435 118662604 -21654161 - MER58A DNA MER1_type 0 224 1 870 257 181 35 chr10 118662699 118663197 -21653568 - L2 LINE L2 0 3313 2731 268 287 69 0 chr10 118663275 118663362 -21653403 + MIR SINE MIR 98 190 -72 310 274 83 0 chr10 118664000 118664084 -21652681 - MIR SINE MIR -57 151 61 374 229 171 0 chr10 118665085 118665190 -21651575 - MER91B DNA MER1_type -66 124 2 638 226 37 55 chr10 118665205 118665422 -21651343 + L3 LINE CR1 1276 1488 -89 346 270 60 65 chr10 118666375 118666560 -21650205 + MIR SINE MIR 79 262 0 1592 213 21 106 chr10 118667292 118667875 -21648890 - MLT1H LTR MaLR 0 549 17 219 336 50 43 chr10 118668475 118668615 -21648150 + L2 LINE L2 3165 3305 -8 2096 221 119 55 chr10 118668855 118669140 -21647625 + L1MD2 LINE L1 5570 5835 -524 1794 189 141 7 chr10 118669140 118669552 -21647213 - MLT1C LTR MaLR 0 467 1 2096 221 119 55 chr10 118669552 118669802 -21646963 + L1MD2 LINE L1 5835 6067 -292 183 80 0 0 chr10 118669802 118669827 -21646938 + (CA)n Simple_repeat Simple_repeat 2 26 0 2096 221 119 55 chr10 118669827 118670019 -21646746 + L1MD2 LINE L1 6067 6345 -14 361 229 150 43 chr10 118670401 118670541 -21646224 + MIR3 SINE MIR 40 194 -14 927 236 11 0 chr10 118670890 118671072 -21645693 - MER63A DNA MER1_type 0 210 27 442 276 0 0 chr10 118671200 118671305 -21645460 + MIR SINE MIR 61 165 -97 802 289 60 16 chr10 118671459 118671708 -21645057 + MIR SINE MIR 3 262 0 1053 199 66 123 chr10 118671727 118672165 -21644600 + MLT1C LTR MaLR 6 418 -49 461 202 36 0 chr10 118672176 118672260 -21644505 - FRAM SINE Alu -62 114 28 670 250 68 31 chr10 118672759 118672951 -21643814 - MIR SINE MIR -7 255 57 356 207 11 11 chr10 118673129 118673216 -21643549 - MER53 DNA DNA -4 185 99 350 299 0 9 chr10 118673265 118673372 -21643393 - MER103 DNA DNA -49 117 12 1075 147 0 33 chr10 118673473 118673657 -21643108 + AluJb SINE Alu 134 311 -1 197 294 162 44 chr10 118673776 118674072 -21642693 + L2 LINE L2 2645 2975 -339 2158 185 47 7 chr10 118674375 118674819 -21641946 - L1MB5 LINE L1 -8 6166 5705 1153 250 117 10 chr10 118674976 118675360 -21641405 - LTR33 LTR ERVL -82 439 15 485 297 209 19 chr10 118675927 118676373 -21640392 + L2 LINE L2 2730 3272 0 222 283 0 0 chr10 118676696 118676749 -21640016 + CT-rich Low_complexity Low_complexity 1 53 0 330 283 40 73 chr10 118677052 118677229 -21639536 + MIR3 SINE MIR 33 203 -5 397 218 82 18 chr10 118678191 118678301 -21638464 - MIR3 SINE MIR -10 198 82 21 0 0 0 chr10 118678388 118678409 -21638356 + AT_rich Low_complexity Low_complexity 1 21 0 297 301 68 0 chr10 118678439 118678542 -21638223 + MIR SINE MIR 35 144 -118 197 283 0 0 chr10 118678927 118678973 -21637792 + L2 LINE L2 3222 3267 -5 248 236 0 0 chr10 118679080 118679135 -21637630 - MER117 DNA MER1_type -29 168 114 190 242 97 16 chr10 118679260 118679322 -21637443 - MIR SINE MIR -124 138 72 831 200 61 18 chr10 118679424 118679803 -21636962 - L1ME2 LINE L1 -7 6157 5727 1415 295 97 22 chr10 118679805 118680344 -21636421 + MLT1E LTR MaLR 15 593 0 2354 86 0 0 chr10 118681379 118681682 -21635083 + AluSg SINE Alu 1 303 -7 498 256 97 17 chr10 118682219 118682395 -21634370 + MIR SINE MIR 12 201 -61 2288 125 33 25 chr10 118682860 118683221 -21633544 - THE1B LTR MaLR 0 364 1 347 220 19 31 chr10 118683949 118684108 -21632657 + (TG)n Simple_repeat Simple_repeat 1 157 0 422 277 101 20 chr10 118684176 118684324 -21632441 + MIR SINE MIR 6 165 -97 1232 71 0 6 chr10 118684354 118684522 -21632243 + L1PA13 LINE L1 5997 6163 0 718 311 22 4 chr10 118685880 118686105 -21630660 + LTR16B LTR ERVL 68 296 -168 * 847 234 51 26 chr10 118686103 118686368 -21630397 - MLT1G3 LTR MaLR -281 309 7 187 281 11 45 chr10 118687940 118688029 -21628736 + MER5A DNA MER1_type 99 184 -5 371 250 157 0 chr10 118688087 118688195 -21628570 - MIR3 SINE MIR -37 171 47 213 263 68 98 chr10 118688928 118689133 -21627632 + L2 LINE L2 2856 3054 -218 1388 231 87 23 chr10 118689863 118689903 -21626862 - MLT2D LTR ERVL 0 414 378 180 0 0 0 chr10 118689903 118689923 -21626842 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1388 231 87 23 chr10 118689923 118690271 -21626494 - MLT2D LTR ERVL -36 378 1 352 267 91 41 chr10 118690613 118690948 -21625817 + MLT1I LTR MaLR 66 422 -28 1697 153 0 42 chr10 118691107 118691414 -21625351 + AluJb SINE Alu 1 294 -18 239 373 75 10 chr10 118692766 118692967 -21623798 + MIR SINE MIR 48 261 -1 34 0 0 0 chr10 118693464 118693498 -21623267 + AT_rich Low_complexity Low_complexity 1 34 0 445 207 12 0 chr10 118694282 118694364 -21622401 + MER81 DNA DNA 31 113 -1 296 278 11 33 chr10 118695564 118695654 -21621111 - L2 LINE L2 0 3313 3226 410 297 149 39 chr10 118695654 118695954 -21620811 - L2 LINE L2 -273 3040 2712 1292 90 0 11 chr10 118695954 118696131 -21620634 - AluSp SINE Alu -14 299 125 411 261 0 0 chr10 118696131 118696219 -21620546 - L1MC4 LINE L1 -1341 6701 6614 314 206 95 0 chr10 118696166 118696229 -21620536 + L1MC4 LINE L1 6613 6681 -1361 * 918 135 0 0 chr10 118696233 118696366 -21620399 - AluSp SINE Alu -180 133 1 536 261 106 82 chr10 118696366 118696696 -21620069 - L2 LINE L2 -590 2724 2387 1376 158 201 4 chr10 118696794 118697072 -21619693 - MSTD LTR MaLR 0 396 64 1718 174 7 3 chr10 118697189 118697488 -21619277 - AluJb SINE Alu -12 300 1 876 252 45 25 chr10 118697489 118697731 -21619034 - MIR SINE MIR -4 258 12 381 328 56 20 chr10 118698921 118699119 -21617646 + L2 LINE L2 3097 3301 -12 1656 219 55 55 chr10 118699122 118699611 -21617154 + MLT1D LTR MaLR 1 489 -16 242 277 24 0 chr10 118699722 118699805 -21616960 + L2 LINE L2 2914 2998 -274 1778 216 21 62 chr10 118700170 118700731 -21616034 - L1MC5 LINE L1 -435 7526 6989 184 267 22 0 chr10 118701459 118701504 -21615261 - MIR3 SINE MIR -9 199 154 1068 245 159 34 chr10 118701535 118701956 -21614809 - MLT1H LTR MaLR -13 536 29 253 262 112 19 chr10 118701990 118702097 -21614668 - MIR SINE MIR -63 145 29 201 111 56 0 chr10 118704148 118704184 -21612581 + G-rich Low_complexity Low_complexity 1 38 0 266 326 11 0 chr10 118704322 118704417 -21612348 - MIR SINE MIR -33 229 134 1352 249 71 14 chr10 118704466 118704904 -21611861 + LTR16B LTR ERVL 1 463 -1 894 253 21 0 chr10 118705320 118705561 -21611204 + MIR SINE MIR 10 255 -7 313 272 44 44 chr10 118707846 118708004 -21608761 - L2 LINE L2 -559 2755 2598 337 283 144 40 chr10 118708628 118708801 -21607964 + MIR3 SINE MIR 12 202 -6 421 268 101 15 chr10 118708870 118709095 -21607670 + MIR SINE MIR 14 255 -7 2212 172 72 41 chr10 118709408 118709897 -21606868 + MLT1D LTR MaLR 2 505 0 3103 94 31 7 chr10 118709930 118710377 -21606388 + L1MA2 LINE L1 5576 6033 -271 2937 87 67 37 chr10 118710489 118710981 -21605784 + L1MA2 LINE L1 5798 6304 0 491 273 83 19 chr10 118711060 118711276 -21605489 - L1MC5 LINE L1 -417 7544 7315 225 0 0 0 chr10 118712091 118712116 -21604649 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 89 0 0 chr10 118712339 118712384 -21604381 + (TC)n Simple_repeat Simple_repeat 1 45 0 254 295 13 0 chr10 118713625 118713703 -21603062 + MIR SINE MIR 74 152 -110 552 238 65 0 chr10 118714108 118714266 -21602499 - MIR SINE MIR -50 212 46 1501 256 6 0 chr10 118714271 118714591 -21602174 - MER58B DNA MER1_type -19 322 1 258 188 333 0 chr10 118714634 118714730 -21602035 - MIR SINE MIR -108 154 27 244 271 86 76 chr10 118714959 118715425 -21601340 - L2 LINE L2 -1 3271 2773 2145 89 0 0 chr10 118715632 118715901 -21600864 + AluY SINE Alu 41 309 -2 343 312 65 21 chr10 118716257 118716474 -21600291 + MIR3 SINE MIR 14 231 -31 21 36 0 0 chr10 118717543 118717571 -21599194 + AT_rich Low_complexity Low_complexity 1 28 0 2318 45 52 7 chr10 118718007 118718296 -21598469 + AluY SINE Alu 1 302 -9 1428 167 72 18 chr10 118719177 118719453 -21597312 + AluJo SINE Alu 1 291 -21 650 165 97 57 chr10 118719507 118719683 -21597082 + MLT1C LTR MaLR 2 184 -283 329 113 19 0 chr10 118719687 118719740 -21597025 + U7 snRNA snRNA 3 56 -7 1919 134 13 22 chr10 118719747 118720060 -21596705 + MLT1C LTR MaLR 158 467 0 327 92 46 0 chr10 118720365 118720430 -21596335 + (TG)n Simple_repeat Simple_repeat 1 68 0 218 191 44 59 chr10 118720644 118720712 -21596053 - MIR SINE MIR -72 190 124 422 224 56 8 chr10 118721699 118721824 -21594941 + MIR SINE MIR 117 247 -15 330 239 73 9 chr10 118722469 118722578 -21594187 + LTR67 LTR ERVL 438 553 -4 268 336 24 16 chr10 118722622 118722747 -21594018 - MIR SINE MIR -66 142 17 286 302 62 16 chr10 118725353 118725482 -21591283 + L2 LINE L2 2986 3120 -193 415 290 65 12 chr10 118725587 118725756 -21591009 + L2 LINE L2 3136 3313 0 511 170 41 61 chr10 118725833 118725980 -21590785 - MLT1H LTR MaLR -7 560 417 582 215 107 39 chr10 118726037 118726235 -21590530 - MLT1H LTR MaLR -261 288 38 267 114 0 0 chr10 118726293 118726328 -21590437 - U2 snRNA snRNA -153 35 1 351 338 7 14 chr10 118726342 118726481 -21590284 - MIR SINE MIR -105 157 20 358 285 95 13 chr10 118726628 118726786 -21589979 + MIR SINE MIR 59 229 -33 378 242 216 42 chr10 118727172 118727362 -21589403 - MLT1K LTR MaLR -3 585 363 472 265 0 0 chr10 118729507 118729609 -21587156 + MIR SINE MIR 48 149 -113 26 64 0 0 chr10 118729659 118729706 -21587059 + AT_rich Low_complexity Low_complexity 1 47 0 823 285 92 34 chr10 118729711 118730212 -21586553 + MLT1H LTR MaLR 17 546 -3 197 33 33 0 chr10 118731032 118731062 -21585703 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 253 294 43 0 chr10 118731072 118731164 -21585601 - L2 LINE L2 -36 3277 3182 1957 265 41 32 chr10 118731882 118732470 -21584295 - MLT1E LTR MaLR 0 593 1 215 269 19 0 chr10 118732541 118732593 -21584172 - L3 LINE CR1 -15 1562 1510 498 255 100 39 chr10 118732826 118733057 -21583708 - L1M4 LINE L1 -1821 4325 4081 2126 162 8 22 chr10 118733167 118733531 -21583234 - MLT1A1 LTR MaLR -2 363 5 240 111 0 0 chr10 118734005 118734041 -21582724 + (TG)n Simple_repeat Simple_repeat 1 36 0 524 250 62 0 chr10 118734353 118734497 -21582268 - MIR SINE MIR -2 260 108 21 0 0 0 chr10 118736640 118736661 -21580104 + AT_rich Low_complexity Low_complexity 1 21 0 248 236 0 18 chr10 118738108 118738163 -21578602 + (TG)n Simple_repeat Simple_repeat 1 54 0 239 214 36 60 chr10 118738485 118738569 -21578196 + LTR67 LTR ERVL 461 542 -15 1288 246 159 11 chr10 118738917 118739295 -21577470 + LTR16C LTR ERVL 1 434 -57 451 335 45 18 chr10 118740043 118740264 -21576501 - MIR SINE MIR -8 254 28 766 160 0 30 chr10 118740274 118740405 -21576360 + FLAM_C SINE Alu 1 127 -6 311 178 25 11 chr10 118740446 118740525 -21576240 - MIR3 SINE MIR -41 167 103 245 242 16 0 chr10 118741122 118741184 -21575581 - MLT1K LTR MaLR -8 580 518 1588 281 52 8 chr10 118741601 118742081 -21574684 + MLT1J LTR MaLR 1 501 -10 578 220 23 79 chr10 118743582 118743796 -21572969 + MIR SINE MIR 32 233 -29 263 313 104 15 chr10 118743873 118744007 -21572758 - L2 LINE L2 -4 3309 3164 22 0 0 0 chr10 118744817 118744839 -21571926 + AT_rich Low_complexity Low_complexity 1 22 0 1158 193 14 9 chr10 118745617 118745835 -21570930 + MER20 DNA MER1_type 1 219 0 210 118 0 0 chr10 118746059 118746093 -21570672 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 518 293 125 0 chr10 118746279 118746487 -21570278 + MIR SINE MIR 13 246 -16 459 258 136 20 chr10 118747095 118747293 -21569472 - MIR SINE MIR -28 234 14 258 136 0 0 chr10 118749623 118749667 -21567098 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 264 59 0 0 chr10 118750171 118750205 -21566560 + (A)n Simple_repeat Simple_repeat 1 34 0 195 42 0 0 chr10 118750431 118750455 -21566310 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 200 176 0 0 chr10 118751812 118751846 -21564919 + CT-rich Low_complexity Low_complexity 1 34 0 182 244 0 0 chr10 118752158 118752199 -21564566 + L3b LINE CR1 1539 1579 -4 239 361 46 0 chr10 118752886 118752994 -21563771 + L2 LINE L2 2745 2857 -457 369 0 0 0 chr10 118754084 118754125 -21562640 + (CA)n Simple_repeat Simple_repeat 2 42 0 685 301 0 38 chr10 118754228 118754437 -21562328 - MIR SINE MIR -48 214 14 204 326 78 31 chr10 118754497 118754626 -21562139 + MIR SINE MIR 60 194 -68 1466 124 8 33 chr10 118754675 118754940 -21561825 + AluSg/x SINE Alu 67 310 0 2302 65 0 10 chr10 118755072 118755364 -21561401 - AluY SINE Alu -7 304 16 351 281 25 25 chr10 118756553 118756674 -21560091 - MIR SINE MIR -48 214 94 537 324 47 19 chr10 118757638 118757851 -21558914 - MIR SINE MIR -31 231 13 802 175 11 6 chr10 118758127 118758304 -21558461 - MER53 DNA DNA -2 187 10 180 0 0 0 chr10 118758400 118758420 -21558345 + (TAA)n Simple_repeat Simple_repeat 3 22 0 503 179 60 0 chr10 118758567 118758651 -21558114 - MER5B DNA MER1_type -1 177 89 2136 126 0 0 chr10 118758985 118759286 -21557479 + AluSq SINE Alu 1 301 -12 914 178 56 22 chr10 118760847 118761027 -21555738 - MER5A DNA MER1_type -1 188 3 373 285 133 20 chr10 118761188 118761285 -21555480 + MER5A DNA MER1_type 16 137 -52 2440 103 27 43 chr10 118761285 118761655 -21555110 + THE1B LTR MaLR 1 364 0 373 285 133 20 chr10 118761655 118761708 -21555057 + MER5A DNA MER1_type 137 183 -6 230 323 0 0 chr10 118761762 118761827 -21554938 - MIR3 SINE MIR -51 157 93 338 322 38 38 chr10 118763199 118763382 -21553383 - L2 LINE L2 -5 3308 3126 222 329 35 0 chr10 118765962 118766047 -21550718 + MIR SINE MIR 119 206 -56 667 280 66 29 chr10 118766345 118766514 -21550251 - MIR SINE MIR -3 259 77 1877 195 72 16 chr10 118766514 118766956 -21549809 - MLT1C LTR MaLR 0 467 1 667 280 66 29 chr10 118766956 118767029 -21549736 - MIR SINE MIR -185 77 8 243 338 81 74 chr10 118767704 118768061 -21548704 + L2 LINE L2 2877 3239 -33 1637 164 72 23 chr10 118768061 118768409 -21548356 - MLT1A1 LTR MaLR 0 365 1 243 338 81 74 chr10 118768409 118768444 -21548321 + L2 LINE L2 3239 3272 0 711 247 34 60 chr10 118768591 118768826 -21547939 + MIR SINE MIR 34 262 0 464 256 70 45 chr10 118769411 118769567 -21547198 + MIR3 SINE MIR 45 204 -4 350 299 58 26 chr10 118769628 118769782 -21546983 + MIR SINE MIR 37 195 -67 180 0 0 0 chr10 118770045 118770065 -21546700 + (ATG)n Simple_repeat Simple_repeat 1 20 0 356 246 145 37 chr10 118770065 118770280 -21546485 - MIR SINE MIR -5 257 16 2173 84 3 0 chr10 118770747 118771033 -21545732 - AluSq SINE Alu -13 300 14 2473 74 0 0 chr10 118771287 118771596 -21545169 - AluSc SINE Alu 0 309 1 562 286 63 5 chr10 118771740 118771946 -21544819 + MIR SINE MIR 45 262 0 354 251 141 80 chr10 118772104 118772303 -21544462 - MIR SINE MIR -4 258 48 1839 233 22 15 chr10 118772625 118773084 -21543681 + MLT1C LTR MaLR 6 467 0 223 298 53 0 chr10 118773111 118773168 -21543597 - MIR3 SINE MIR -36 172 113 210 296 82 41 chr10 118776230 118776328 -21540437 + L3 LINE CR1 1410 1511 -66 203 279 115 0 chr10 118776415 118776476 -21540289 - L2 LINE L2 0 3313 3246 438 294 157 41 chr10 118776518 118776881 -21539884 - L2 LINE L2 -192 3121 2710 720 152 0 32 chr10 118777657 118777782 -21538983 - L1M2 LINE L1 -542 5749 5629 1939 155 39 50 chr10 118777782 118777798 -21538967 + L1MA7 LINE L1 5838 5853 -438 2483 90 59 8 chr10 118777798 118778155 -21538610 - THE1C LTR MaLR 0 375 1 1939 155 39 50 chr10 118778155 118778596 -21538169 + L1MA7 LINE L1 5853 6291 0 7505 44 1 1 chr10 118778899 118780525 -21536240 - L1PA5 LINE L1 0 6154 4532 225 222 0 0 chr10 118781986 118782031 -21534734 + L1M3 LINE L1 5831 5875 -305 21 0 0 0 chr10 118782043 118782064 -21534701 + AT_rich Low_complexity Low_complexity 1 21 0 457 289 26 40 chr10 118782587 118782703 -21534062 + MIR SINE MIR 112 227 -35 2011 107 0 0 chr10 118782703 118782973 -21533792 - AluSx SINE Alu -12 300 31 457 289 26 40 chr10 118782973 118783008 -21533757 + MIR SINE MIR 227 261 -1 204 200 0 0 chr10 118783029 118783074 -21533691 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2227 86 3 3 chr10 118783399 118783702 -21533063 + AluSc SINE Alu 1 303 -6 428 250 108 2 chr10 118783774 118783951 -21532814 - MIR SINE MIR -41 221 30 598 324 40 27 chr10 118783978 118784204 -21532561 - MIR SINE MIR 0 262 36 473 221 25 63 chr10 118785349 118785507 -21531258 + MER103 DNA DNA 8 159 -7 496 284 35 61 chr10 118786504 118786784 -21529981 - L1MEc LINE L1 -3815 2400 2162 434 211 174 0 chr10 118788293 118788402 -21528363 + MIR SINE MIR 121 248 -14 348 250 152 0 chr10 118788577 118788669 -21528096 - L2 LINE L2 -1 3271 3166 595 318 81 37 chr10 118789068 118789502 -21527263 + MLT1L LTR MaLR 163 615 0 771 269 128 0 chr10 118789710 118789937 -21526828 - MIR SINE MIR 0 262 7 520 280 43 29 chr10 118791276 118791515 -21525250 - MIR SINE MIR -10 252 12 341 224 143 0 chr10 118791534 118791632 -21525133 + MER81 DNA DNA 2 113 -1 248 361 50 17 chr10 118792301 118792420 -21524345 - MIR3 SINE MIR -84 124 2 237 219 42 135 chr10 118792472 118792568 -21524197 + L2 LINE L2 3161 3247 -25 296 277 46 0 chr10 118792656 118792721 -21524044 + MIR SINE MIR 52 119 -143 326 303 41 16 chr10 118793335 118793457 -21523308 + MIR SINE MIR 23 147 -61 2213 73 16 26 chr10 118793466 118793779 -21522986 + AluSx SINE Alu 1 310 -2 386 292 58 67 chr10 118793861 118794101 -21522664 - MLT1K LTR MaLR -163 425 188 192 200 0 0 chr10 118794280 118794325 -21522440 + (TG)n Simple_repeat Simple_repeat 2 46 0 600 273 25 11 chr10 118794391 118794593 -21522172 + MIR SINE MIR 60 262 0 546 290 15 8 chr10 118795533 118795664 -21521101 - L2 LINE L2 0 3313 3182 239 256 133 0 chr10 118795817 118795907 -21520858 - L1ME4a LINE L1 -3 6118 6017 793 281 33 0 chr10 118795936 118796210 -21520555 - L1ME4a LINE L1 -201 5920 5638 258 213 0 0 chr10 118796210 118796257 -21520508 - L2 LINE L2 -2 3311 3265 483 250 250 40 chr10 118797083 118797331 -21519434 + MLT1H LTR MaLR 248 547 -2 627 186 28 28 chr10 118799076 118799221 -21517544 - MER104 DNA Tc2 -1 179 35 601 228 28 7 chr10 118799260 118799405 -21517360 + MIR SINE MIR 69 216 -46 300 264 0 14 chr10 118799441 118799513 -21517252 + MIR SINE MIR 84 154 -108 361 220 27 47 chr10 118799946 118800078 -21516687 - MIR SINE MIR -73 135 64 1230 265 65 0 chr10 118800138 118800447 -21516318 + MLT1I LTR MaLR 81 409 0 324 235 15 0 chr10 118800738 118800806 -21515959 + MIR SINE MIR 84 152 -110 472 381 21 3 chr10 118801257 118801448 -21515317 + MIR3 SINE MIR 1 196 -12 1557 173 43 108 chr10 118801453 118801870 -21514895 + MLT1B LTR MaLR 1 390 0 245 326 25 71 chr10 118801891 118802087 -21514678 - L2 LINE L2 -234 3038 2852 242 295 0 13 chr10 118802197 118802275 -21514490 - MARNA DNA Mariner -244 342 266 219 268 18 0 chr10 118803964 118804020 -21512745 + MIR SINE MIR 89 145 -63 497 222 9 0 chr10 118804095 118804203 -21512562 + MIR SINE MIR 154 262 0 217 303 26 0 chr10 118805441 118805517 -21511248 + MIR SINE MIR 65 142 -66 497 332 35 0 chr10 118805599 118805831 -21510934 + MIR SINE MIR 20 259 -3 206 288 50 12 chr10 118805882 118805962 -21510803 + MIR SINE MIR 60 142 -66 559 179 27 18 chr10 118806628 118806740 -21510025 - MER81 DNA DNA -1 113 1 2203 98 14 3 chr10 118807104 118807423 -21509342 - AluSx SINE Alu 0 312 1 444 354 23 8 chr10 118807631 118807888 -21508877 - MIR SINE MIR -1 261 1 225 333 0 0 chr10 118808032 118808089 -21508676 + (CA)n Simple_repeat Simple_repeat 1 57 0 213 304 0 14 chr10 118808756 118808825 -21507940 + C-rich Low_complexity Low_complexity 2 69 0 216 122 0 0 chr10 118809526 118809567 -21507198 + (TG)n Simple_repeat Simple_repeat 2 42 0 207 0 0 0 chr10 118809596 118809619 -21507146 + (T)n Simple_repeat Simple_repeat 1 23 0 747 284 41 90 chr10 118810502 118811038 -21505727 - MLT1J LTR MaLR -1 510 1 287 291 78 24 chr10 118811072 118811239 -21505526 - MIR3 SINE MIR -72 136 9 195 276 204 0 chr10 118812449 118812547 -21504218 - MIR3 SINE MIR -41 167 50 2874 154 63 8 chr10 118812952 118813478 -21503287 - MER89 LTR ERV1 -4 555 1 465 171 13 0 chr10 118813867 118813943 -21502822 - L1MD2 LINE L1 -216 6143 6067 4253 160 16 54 chr10 118813960 118814446 -21502319 - L1MD2 LINE L1 -279 6080 5641 1809 161 0 19 chr10 118814446 118814756 -21502009 - AluSx SINE Alu -8 304 1 4253 160 16 54 chr10 118814756 118815164 -21501601 - L1MD2 LINE L1 -718 5641 5219 240 360 12 0 chr10 118815828 118815914 -21500851 - L2 LINE L2 -39 3233 3147 232 301 97 0 chr10 118816951 118817044 -21499721 + L2 LINE L2 3171 3272 0 553 197 8 17 chr10 118817173 118817290 -21499475 - MER103 DNA DNA -49 117 2 1378 262 64 76 chr10 118817930 118818521 -21498244 - MLT1K LTR MaLR -3 585 2 216 0 0 0 chr10 118819182 118819206 -21497559 + (T)n Simple_repeat Simple_repeat 1 24 0 440 247 146 25 chr10 118819287 118819445 -21497320 + MIR SINE MIR 27 203 -59 318 206 48 56 chr10 118819831 118819957 -21496808 - MIR SINE MIR -36 226 102 1575 124 17 0 chr10 118820221 118820462 -21496303 - L1PA16 LINE L1 -9 6157 5913 332 275 117 25 chr10 118820502 118820622 -21496143 + L2 LINE L2 3183 3313 0 306 0 0 0 chr10 118821520 118821554 -21495211 + (CAA)n Simple_repeat Simple_repeat 3 36 0 686 314 29 4 chr10 118821652 118821894 -21494871 + MIR SINE MIR 1 248 -14 3261 134 94 32 chr10 118822141 118822738 -21494027 - MER51A LTR ERV1 0 634 1 255 270 14 14 chr10 118822764 118822838 -21493927 - MER5B DNA MER1_type 0 178 105 248 160 40 0 chr10 118823457 118823507 -21493258 - MLT1J2 LTR MaLR -286 164 113 1122 249 104 25 chr10 118823764 118824129 -21492636 + MLT1I LTR MaLR 16 409 0 335 216 0 57 chr10 118824756 118824844 -21491921 - MIR3 SINE MIR -30 178 96 202 318 11 23 chr10 118825028 118825116 -21491649 - MIR SINE MIR -116 146 60 1883 200 51 23 chr10 118825123 118825594 -21491171 - MLT1D LTR MaLR 0 505 22 420 314 69 0 chr10 118826377 118826536 -21490229 - MIR SINE MIR -70 192 23 194 125 0 25 chr10 118827013 118827053 -21489712 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 2690 96 8 8 chr10 118827340 118827715 -21489050 + THE1C LTR MaLR 1 375 0 445 283 101 0 chr10 118828110 118828248 -21488517 + LTR16A1 LTR ERVL 301 452 -5 424 302 72 16 chr10 118828426 118828731 -21488034 + L1ME LINE L1 2717 3038 -3177 268 306 68 47 chr10 118828837 118828983 -21487782 + L1ME LINE L1 3178 3319 -2896 1485 187 29 13 chr10 118828983 118829293 -21487472 - L1MD2 LINE L1 -2 6357 6043 268 306 68 47 chr10 118829293 118829705 -21487060 + L1ME LINE L1 3319 3748 -2467 427 325 58 41 chr10 118829726 118830290 -21486475 + L1ME LINE L1 3812 4385 -1830 2192 278 69 54 chr10 118830315 118831745 -21485020 + L1ME1 LINE L1 36 1487 -4909 441 227 30 102 chr10 118831752 118831797 -21484968 - MER106B DNA MER1_type -3 1056 1009 2350 104 0 0 chr10 118831797 118832104 -21484661 - AluY SINE Alu -4 307 1 441 227 30 102 chr10 118832104 118832300 -21484465 - MER106B DNA MER1_type -50 1009 4 1590 253 20 27 chr10 118832468 118832577 -21484188 + L1ME1 LINE L1 1753 1861 -4535 2052 156 0 0 chr10 118832577 118832879 -21483886 - AluJb SINE Alu -10 302 1 1590 253 20 27 chr10 118832879 118833330 -21483435 + L1ME1 LINE L1 1861 2309 -4087 3639 301 60 13 chr10 118833348 118834217 -21482548 + L1ME1 LINE L1 2978 3805 -2448 1530 121 5 0 chr10 118834217 118834424 -21482341 + AluSg/x SINE Alu 96 303 -7 3639 301 60 13 chr10 118834424 118835182 -21481583 + L1ME1 LINE L1 3805 6253 0 228 265 171 74 chr10 118835295 118835400 -21481365 + L1ME LINE L1 4478 4571 -1644 2193 115 3 0 chr10 118835400 118835727 -21481038 - AluSq SINE Alu 0 328 1 228 265 171 74 chr10 118835727 118836012 -21480753 + L1ME LINE L1 4571 4907 -1308 468 272 60 15 chr10 118836072 118836324 -21480441 + L1ME LINE L1 4979 5240 -975 235 271 193 7 chr10 118836501 118836641 -21480124 + L1ME LINE L1 5433 5598 -637 2437 126 72 20 chr10 118837940 118838345 -21478420 - MSTB LTR MaLR 0 426 1 1931 148 3 20 chr10 118838630 118838927 -21477838 - AluSx SINE Alu -20 292 1 214 200 38 50 chr10 118839110 118839190 -21477575 + CT-rich Low_complexity Low_complexity 3 81 0 21 0 0 0 chr10 118839414 118839435 -21477330 + AT_rich Low_complexity Low_complexity 1 21 0 1874 153 0 27 chr10 118840188 118840489 -21476276 - AluJb SINE Alu -19 293 1 210 263 40 26 chr10 118840665 118840741 -21476024 + MIR SINE MIR 110 186 -76 307 273 73 9 chr10 118840840 118840950 -21475815 + MIR SINE MIR 68 184 -78 212 239 45 15 chr10 118840991 118841058 -21475707 - L2 LINE L2 0 3313 3245 180 111 0 0 chr10 118842230 118842257 -21474508 + (A)n Simple_repeat Simple_repeat 1 27 0 397 282 112 24 chr10 118843530 118843736 -21473029 + Charlie8 DNA MER1_type 11 234 -2183 526 269 48 6 chr10 118844811 118844978 -21471787 - MIR SINE MIR -56 206 33 1957 161 0 7 chr10 118845289 118845594 -21471171 - AluJb SINE Alu -9 303 1 916 266 130 49 chr10 118846290 118846759 -21470006 - MLT1J LTR MaLR 0 511 5 859 286 88 24 chr10 118848101 118848521 -21468244 - MLT1J LTR MaLR -7 504 58 446 240 31 0 chr10 118848515 118848611 -21468154 + MER99 DNA DNA 6 104 -724 * 387 145 0 0 chr10 118848621 118848683 -21468082 - L1PA13 LINE L1 -11 6152 6091 3294 173 76 18 chr10 118849433 118850117 -21466648 + MER99 DNA DNA 104 827 -1 805 249 11 6 chr10 118850201 118850378 -21466387 - MER45A DNA AcHobo 0 178 1 367 197 0 0 chr10 118850421 118850497 -21466268 - L1ME LINE L1 -303 5818 5743 195 316 92 41 chr10 118851185 118851283 -21465482 + MIR SINE MIR 48 150 -112 1016 194 0 26 chr10 118851297 118851488 -21465277 - MER58A DNA MER1_type -1 223 38 204 283 19 0 chr10 118851508 118851561 -21465204 + MIR SINE MIR 158 211 -51 1463 138 13 4 chr10 118851965 118852204 -21464561 - L1MB1 LINE L1 -1 6167 5927 863 183 0 0 chr10 118852473 118852610 -21464155 + FRAM SINE Alu 23 159 -17 216 167 0 0 chr10 118853188 118853224 -21463541 - L2 LINE L2 -9 3304 3269 346 287 116 37 chr10 118853470 118853560 -21463205 - MIR SINE MIR -10 252 171 2311 128 126 5 chr10 118853560 118853942 -21462823 + MSTA LTR MaLR 1 428 0 346 287 116 37 chr10 118853942 118854015 -21462750 - MIR SINE MIR -91 171 76 1052 177 11 11 chr10 118854302 118854488 -21462277 + MER5A DNA MER1_type 4 189 0 5551 114 27 0 chr10 118854768 118855836 -21460929 - L1PA16 LINE L1 -7 6159 5062 513 222 227 0 chr10 118856916 118857092 -21459673 - L1ME4a LINE L1 -13 6108 5893 268 258 135 11 chr10 118857176 118857265 -21459500 + L2 LINE L2 3168 3267 -5 342 348 51 0 chr10 118857272 118857430 -21459335 - L1ME4a LINE L1 -2002 5806 5641 1100 283 42 26 chr10 118857517 118857899 -21458866 + LTR16C LTR ERVL 100 487 -4 389 270 18 9 chr10 118859123 118859234 -21457531 + MLT1J2 LTR MaLR 1 112 -338 427 265 57 62 chr10 118859323 118859534 -21457231 + MLT1J2 LTR MaLR 241 450 0 389 307 78 12 chr10 118860328 118860494 -21456271 + MIR SINE MIR 62 238 -24 191 367 0 0 chr10 118860856 118860935 -21455830 - MIR SINE MIR -100 108 30 195 139 0 0 chr10 118861326 118861362 -21455403 + (TC)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr10 118861955 118861983 -21454782 + AT_rich Low_complexity Low_complexity 1 28 0 293 288 159 8 chr10 118863197 118863329 -21453436 - MIR3 SINE MIR -21 187 36 1172 194 123 62 chr10 118863731 118864166 -21452599 + MER31B LTR ERV1 1 661 0 2549 7 3 0 chr10 118864253 118864586 -21452179 - AluYb8 SINE Alu 0 334 1 302 243 14 0 chr10 118864779 118864853 -21451912 + MIR SINE MIR 79 153 -109 1358 262 37 44 chr10 118866603 118867120 -21449645 + L2 LINE L2 2777 3293 -20 2150 98 10 3 chr10 118867141 118867438 -21449327 + AluSq SINE Alu 1 299 -14 468 221 157 91 chr10 118867998 118868345 -21448420 + MLT1H LTR MaLR 60 450 0 762 300 73 0 chr10 118869099 118869332 -21447433 - MIR SINE MIR 0 262 13 432 55 0 0 chr10 118869464 118869519 -21447246 + (CA)n Simple_repeat Simple_repeat 2 56 0 301 236 87 120 chr10 118870846 118871054 -21445711 - L2 LINE L2 0 3313 3113 286 306 20 41 chr10 118871264 118871411 -21445354 - MIR3 SINE MIR -1 207 64 274 274 32 32 chr10 118871633 118871680 -21445085 + MLT1L LTR MaLR 490 536 -79 1301 170 13 13 chr10 118871680 118871915 -21444850 - MER46A DNA MER2_type -1 235 1 274 274 32 32 chr10 118871915 118871991 -21444774 + MLT1L LTR MaLR 535 613 -2 1655 154 12 41 chr10 118872094 118872439 -21444326 - L1MB7 LINE L1 -16 6666 6332 497 188 12 0 chr10 118872439 118872524 -21444241 + Tigger5 DNA MER2_type 10 95 -2228 * 764 171 8 0 chr10 118872519 118872648 -21444117 + Tigger5 DNA MER2_type 2194 2323 0 2725 184 59 30 chr10 118872654 118873529 -21443236 - L1MB7 LINE L1 -353 6319 5396 766 235 52 0 chr10 118873529 118873682 -21443083 - FRAM SINE Alu -2 164 4 2725 184 59 30 chr10 118873682 118873997 -21442768 - L1MB7 LINE L1 -1276 5396 5092 1801 176 40 9 chr10 118874050 118874379 -21442386 + MLT1A1 LTR MaLR 25 363 -2 1338 173 18 3 chr10 118874382 118874665 -21442100 - L1MB7 LINE L1 -1550 5094 4808 9373 96 13 12 chr10 118874667 118875313 -21441452 + HSMAR1 DNA Mariner 9 659 -628 2167 120 0 0 chr10 118875313 118875621 -21441144 + AluSx SINE Alu 1 308 -4 9373 96 13 12 chr10 118875621 118876250 -21440515 + HSMAR1 DNA Mariner 659 1286 -1 21 71 0 0 chr10 118876250 118876292 -21440473 + AT_rich Low_complexity Low_complexity 1 42 0 1458 222 18 18 chr10 118876294 118876637 -21440128 - L1MB7 LINE L1 -1845 4799 4457 5046 209 45 50 chr10 118876639 118878266 -21438499 - L1MB7 LINE L1 -3625 3019 1385 441 36 0 0 chr10 118878266 118878321 -21438444 + (TG)n Simple_repeat Simple_repeat 2 56 0 5046 209 45 50 chr10 118878321 118878754 -21438011 - L1MB7 LINE L1 -5259 1385 951 1409 201 27 0 chr10 118878754 118878873 -21437892 + AluJo SINE Alu 1 115 -197 222 37 0 0 chr10 118878873 118878900 -21437865 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1409 201 27 0 chr10 118878900 118879074 -21437691 + AluJo SINE Alu 115 302 -10 5046 209 45 50 chr10 118879074 118879407 -21437358 - L1MB7 LINE L1 -5693 951 512 264 232 49 0 chr10 118879528 118879610 -21437155 + CT-rich Low_complexity Low_complexity 1 86 0 347 315 60 76 chr10 118879621 118879838 -21436927 - L2 LINE L2 -37 3235 3016 2156 113 3 0 chr10 118879838 118880140 -21436625 + AluSx SINE Alu 1 303 -9 347 315 60 76 chr10 118880140 118880366 -21436399 - L2 LINE L2 -256 3016 2804 2129 118 0 0 chr10 118880366 118880662 -21436103 - AluSx SINE Alu -16 296 1 347 315 60 76 chr10 118880662 118880717 -21436048 - L2 LINE L2 -468 2804 2750 189 0 0 0 chr10 118880847 118880868 -21435897 + (A)n Simple_repeat Simple_repeat 1 21 0 286 330 23 0 chr10 118881422 118881510 -21435255 - MER81 DNA DNA 0 114 25 283 296 25 0 chr10 118882405 118882486 -21434279 - MIR SINE MIR -26 236 154 245 189 19 19 chr10 118882487 118882540 -21434225 - MER46C DNA MER2_type 0 338 286 805 176 0 15 chr10 118882550 118882686 -21434079 + AluJb SINE Alu 2 135 -177 1332 97 10 5 chr10 118882694 118882889 -21433876 + L1PB2 LINE L1 5954 6149 -2 957 190 19 126 chr10 118882917 118883227 -21433538 - MER46C DNA MER2_type -61 277 1 189 175 0 25 chr10 118883227 118883267 -21433498 - MIR SINE MIR -105 157 119 514 173 28 134 chr10 118884812 118884991 -21431774 + MER104 DNA Tc2 8 167 -13 290 228 206 11 chr10 118885009 118885101 -21431664 - MIR SINE MIR -117 145 36 468 293 64 11 chr10 118885446 118885623 -21431142 + MIR SINE MIR 3 185 -63 219 103 0 0 chr10 118885704 118885743 -21431022 + (ATG)n Simple_repeat Simple_repeat 3 41 0 267 275 9 45 chr10 118886365 118886480 -21430285 - MIR SINE MIR -82 126 7 274 293 10 20 chr10 118887050 118887149 -21429616 + L2 LINE L2 2965 3062 -251 262 266 76 13 chr10 118887214 118887293 -21429472 + L2 LINE L2 3189 3272 0 561 320 35 35 chr10 118887929 118888160 -21428605 + MIR SINE MIR 32 262 0 185 65 32 0 chr10 118888248 118888279 -21428486 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1896 150 0 0 chr10 118888278 118888588 -21428177 - AluSx SINE Alu 0 311 2 490 263 39 34 chr10 118888760 118888939 -21427826 - MER117 DNA MER1_type -15 182 3 193 267 119 10 chr10 118889419 118889520 -21427245 - L2 LINE L2 -961 2353 2242 1004 263 8 25 chr10 118889896 118890139 -21426626 + MIR SINE MIR 12 250 -12 918 225 66 8 chr10 118890717 118890961 -21425804 - MIR SINE MIR 0 262 5 231 328 98 8 chr10 118891781 118891903 -21424862 - L2 LINE L2 0 3313 3181 533 328 73 35 chr10 118892302 118892534 -21424231 + MIR SINE MIR 21 261 -1 534 258 29 98 chr10 118892991 118893235 -21423530 - MIR SINE MIR -27 235 9 572 288 20 18 chr10 118894489 118894707 -21422058 + MIR SINE MIR 1 212 -50 1654 181 14 3 chr10 118894731 118895019 -21421746 + AluJb SINE Alu 1 291 -21 1582 162 40 4 chr10 118896276 118896554 -21420211 + AluJb SINE Alu 1 288 -24 694 214 0 0 chr10 118897334 118897451 -21419314 - FLAM_C SINE Alu -16 117 1 1850 118 57 0 chr10 118897462 118897741 -21419024 - AluSc SINE Alu -14 295 1 30 45 0 0 chr10 118897839 118897883 -21418882 + AT_rich Low_complexity Low_complexity 1 44 0 574 267 135 53 chr10 118897917 118898220 -21418545 - HAL1 LINE L1 -4 2503 2176 2098 117 3 0 chr10 118898369 118898669 -21418096 - AluSx SINE Alu -11 301 1 583 295 86 44 chr10 118899104 118899684 -21417081 - L2 LINE L2 -2 3270 2660 1570 125 114 7 chr10 118899699 118899971 -21416794 - AluSx SINE Alu -11 301 1 738 234 38 55 chr10 118900786 118901021 -21415744 + MIR SINE MIR 1 231 -31 400 274 134 13 chr10 118901072 118901229 -21415536 - LTR33A LTR ERVL -277 246 71 3921 65 35 0 chr10 118901230 118901738 -21415027 - L1PA8 LINE L1 -2 6170 5645 413 38 0 0 chr10 118901748 118901801 -21414964 + MADE1 DNA Mariner 28 80 0 2866 122 16 0 chr10 118901899 118902326 -21414439 - MER57B LTR ERV1 0 434 1 2009 134 0 0 chr10 118902390 118902681 -21414084 + AluSx SINE Alu 1 291 -21 1416 111 4 71 chr10 118902910 118903162 -21413603 + L1PA16 LINE L1 5931 6165 -1 1841 136 28 0 chr10 118903369 118903656 -21413109 + AluSx SINE Alu 1 295 -17 317 44 22 0 chr10 118903989 118904034 -21412731 + MADE1 DNA Mariner 1 46 -34 187 309 0 0 chr10 118904123 118904178 -21412587 - MIR SINE MIR -50 212 158 267 208 104 144 chr10 118904590 118904723 -21412042 + Charlie8 DNA MER1_type 35 172 -275 2154 137 0 6 chr10 118904723 118905036 -21411729 + AluSx SINE Alu 1 311 -1 267 208 104 144 chr10 118905036 118905062 -21411703 + Charlie8 DNA MER1_type 172 197 -250 1164 68 11 11 chr10 118905062 118905239 -21411526 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 267 208 104 144 chr10 118905239 118905354 -21411411 + Charlie8 DNA MER1_type 197 265 -182 483 192 256 35 chr10 118905732 118905935 -21410830 - MLT1D LTR MaLR -2 503 256 230 29 59 0 chr10 118905962 118905996 -21410769 + (TTCTC)n Simple_repeat Simple_repeat 1 36 0 236 261 109 51 chr10 118906383 118906521 -21410244 - L2 LINE L2 0 3313 3168 2185 126 0 0 chr10 118906605 118906898 -21409867 - AluSx SINE Alu -14 298 6 403 320 83 36 chr10 118907027 118907364 -21409401 - L2 LINE L2 -438 2876 2524 311 322 34 8 chr10 118907751 118907869 -21408896 - MIR SINE MIR -65 143 23 234 234 0 31 chr10 118907992 118908056 -21408709 - MIR SINE MIR -20 242 181 2360 103 0 0 chr10 118908483 118908785 -21407980 - AluSx SINE Alu -10 302 1 603 252 25 44 chr10 118908945 118909104 -21407661 - MIR SINE MIR -20 242 87 363 256 211 6 chr10 118909675 118909831 -21406934 - MIR SINE MIR -6 256 69 1487 157 3 97 chr10 118910635 118910935 -21405830 - AluJo SINE Alu -16 296 25 190 345 42 30 chr10 118910959 118911124 -21405641 + L2 LINE L2 2550 2716 -598 1396 81 6 6 chr10 118911124 118911298 -21405467 + AluSp SINE Alu 1 174 -139 233 370 0 0 chr10 118911301 118911382 -21405383 - L2 LINE L2 -30 3283 3203 587 286 68 103 chr10 118911390 118911490 -21405275 - L2 LINE L2 -446 2868 2766 2305 119 0 0 chr10 118911490 118911793 -21404972 + AluSq SINE Alu 1 303 -10 587 286 68 103 chr10 118911793 118911818 -21404947 - L2 LINE L2 -548 2766 2742 2481 84 0 0 chr10 118911818 118912116 -21404649 - AluY SINE Alu -13 298 1 587 286 68 103 chr10 118912116 118912168 -21404597 - L2 LINE L2 -572 2742 2690 2316 112 3 0 chr10 118912168 118912480 -21404285 - AluSp SINE Alu 0 313 1 587 286 68 103 chr10 118912480 118912754 -21404011 - L2 LINE L2 -624 2690 2431 23 0 0 0 chr10 118913571 118913594 -21403171 + AT_rich Low_complexity Low_complexity 1 23 0 845 267 90 10 chr10 118913645 118913945 -21402820 + LTR16A LTR ERVL 121 444 -6 507 261 101 40 chr10 118914156 118914355 -21402410 + MIR SINE MIR 8 218 -44 406 214 155 0 chr10 118914708 118914811 -21401954 + L2 LINE L2 3193 3311 -2 479 261 0 0 chr10 118915033 118915144 -21401621 + MER58A DNA MER1_type 46 156 0 753 253 45 15 chr10 118915362 118915564 -21401201 - MIR SINE MIR -32 230 23 1943 173 0 3 chr10 118915704 118916011 -21400754 + AluJb SINE Alu 1 306 -6 211 259 0 59 chr10 118917041 118917126 -21399639 + L2 LINE L2 3192 3271 -1 444 260 73 64 chr10 118917282 118917486 -21399279 - L2 LINE L2 -1 3312 3107 2216 126 0 0 chr10 118917662 118917978 -21398787 + AluSx SINE Alu 1 312 0 508 239 126 36 chr10 118920128 118920295 -21396470 + MIR SINE MIR 22 203 -59 411 337 144 0 chr10 118921254 118921456 -21395309 - MIR SINE MIR -2 260 30 209 214 54 18 chr10 118921880 118921936 -21394829 - MIR SINE MIR -108 154 97 353 245 54 61 chr10 118922399 118922546 -21394219 + Charlie8 DNA MER1_type 84 229 -2188 1661 162 32 41 chr10 118922569 118922884 -21393881 + AluJo SINE Alu 1 312 0 714 201 0 8 chr10 118922944 118923078 -21393687 - FLAM_C SINE Alu 0 133 1 634 299 57 20 chr10 118923901 118924145 -21392620 - MIR SINE MIR 0 262 10 594 238 81 53 chr10 118924363 118924797 -21391968 + MER113 DNA MER1_type? 1 501 -20 2244 112 0 0 chr10 118924992 118925288 -21391477 - AluSx SINE Alu -16 296 1 257 270 0 16 chr10 118925546 118925609 -21391156 - MIR SINE MIR -115 147 86 509 277 13 39 chr10 118925685 118925840 -21390925 + MER5A DNA MER1_type 39 189 0 402 303 28 7 chr10 118926043 118926188 -21390577 + MIR3 SINE MIR 37 184 -24 226 65 43 109 chr10 118926429 118926455 -21390310 + L1MB4 LINE L1 5441 5464 -702 3678 188 12 6 chr10 118926455 118927179 -21389586 + L1MB4 LINE L1 5446 6174 -6 226 65 43 109 chr10 118927179 118927198 -21389567 + L1MB4 LINE L1 5464 5483 -683 2258 109 3 3 chr10 118928571 118928874 -21387891 - AluSx SINE Alu -9 303 1 617 333 25 8 chr10 118929032 118929269 -21387496 + MIR SINE MIR 11 251 -11 2649 90 28 3 chr10 118930124 118930479 -21386286 - THE1B LTR MaLR 0 364 1 720 238 54 60 chr10 118930772 118930981 -21385784 - L1MC4 LINE L1 -3 8039 7831 2291 96 7 0 chr10 118930981 118931274 -21385491 - AluY SINE Alu -16 295 1 720 238 54 60 chr10 118931274 118931400 -21385365 - L1MC4 LINE L1 -211 7831 7706 2155 152 56 22 chr10 118931401 118931810 -21384955 - MSTB1 LTR MaLR 0 432 10 686 216 49 84 chr10 118931827 118932134 -21384631 - L1MC4 LINE L1 -195 7674 7332 560 183 325 0 chr10 118932340 118932509 -21384256 - MER58A DNA MER1_type 0 224 1 862 258 181 35 chr10 118932604 118933102 -21383663 - L2 LINE L2 0 3313 2731 268 287 69 0 chr10 118933180 118933267 -21383498 + MIR SINE MIR 98 190 -72 314 274 83 0 chr10 118933904 118933988 -21382777 - MIR SINE MIR -57 151 61 375 229 171 0 chr10 118934989 118935094 -21381671 - MER91B DNA MER1_type -66 124 2 642 226 37 55 chr10 118935109 118935326 -21381439 + L3 LINE CR1 1276 1488 -89 332 270 60 65 chr10 118936279 118936464 -21380301 + MIR SINE MIR 79 262 0 1905 205 19 83 chr10 118937196 118937772 -21378993 - MLT1H LTR MaLR 0 549 11 787 246 96 12 chr10 118939628 118939868 -21376897 + MIR SINE MIR 1 260 -2 207 272 95 68 chr10 118940038 118940185 -21376580 - MIR3 SINE MIR -34 174 24 529 257 101 0 chr10 118940687 118940835 -21375930 - MIR3 SINE MIR -6 202 40 252 86 0 0 chr10 118941057 118941092 -21375673 + (TG)n Simple_repeat Simple_repeat 2 36 0 192 164 41 96 chr10 118941582 118941655 -21375110 + L2 LINE L2 400 468 -2846 283 256 47 0 chr10 118942293 118942379 -21374386 - MIR SINE MIR -70 192 103 404 297 89 0 chr10 118942459 118942635 -21374130 - MIR3 SINE MIR -11 197 3 315 296 81 49 chr10 118943678 118943903 -21372862 - MIR SINE MIR -6 256 16 371 158 9 123 chr10 118945037 118945109 -21371656 - MLT1I LTR MaLR -15 394 338 1816 166 36 10 chr10 118945109 118945410 -21371355 + AluJb SINE Alu 1 309 -3 371 158 9 123 chr10 118945410 118945451 -21371314 - MLT1I LTR MaLR -71 338 294 2394 104 3 0 chr10 118945906 118946215 -21370550 - AluSg SINE Alu 0 310 1 353 247 0 0 chr10 118947081 118947154 -21369611 - L2 LINE L2 -10 3262 3190 311 333 21 7 chr10 118947305 118947446 -21369319 + L2 LINE L2 2920 3062 -210 187 250 0 0 chr10 118947831 118947871 -21368894 - L2 LINE L2 -4 3309 3270 421 320 0 8 chr10 118948489 118948617 -21368148 + L2 LINE L2 3187 3313 0 244 250 56 14 chr10 118949250 118949322 -21367443 - MIR SINE MIR -69 139 65 230 290 0 29 chr10 118950722 118950791 -21365974 + MIR SINE MIR 20 86 -176 192 77 0 0 chr10 118951574 118951600 -21365165 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 205 309 75 32 chr10 118951608 118951702 -21365063 - L2 LINE L2 -38 3234 3137 372 287 133 0 chr10 118952285 118952435 -21364330 - MIR SINE MIR -53 209 40 2220 107 10 16 chr10 118953175 118953483 -21363282 + AluSx SINE Alu 7 312 0 182 341 98 30 chr10 118953524 118953688 -21363077 + MIR SINE MIR 27 201 -61 605 250 186 11 chr10 118953794 118953982 -21362783 - MIR SINE MIR -19 243 23 362 283 43 0 chr10 118956214 118956306 -21360459 + MIR3 SINE MIR 82 177 -31 619 279 81 20 chr10 118956310 118956557 -21360208 + MIR SINE MIR 1 262 0 434 204 37 46 chr10 118957112 118957278 -21359487 + MIR SINE MIR 36 196 -58 320 252 83 100 chr10 118957435 118957725 -21359040 - MER5C DNA MER1_type 0 324 40 461 303 133 28 chr10 118957782 118958000 -21358765 - MIR SINE MIR -20 242 2 319 216 95 78 chr10 118961505 118961621 -21355144 - MIR3 SINE MIR -15 193 76 400 264 25 107 chr10 118962863 118963060 -21353705 - MIR SINE MIR -1 261 81 188 267 144 44 chr10 118963062 118963152 -21353613 - MIR SINE MIR -145 117 19 184 278 144 21 chr10 118964586 118964683 -21352082 + MIR SINE MIR 30 138 -124 243 0 0 0 chr10 118966286 118966313 -21350452 + (TC)n Simple_repeat Simple_repeat 2 28 0 1560 162 7 35 chr10 118966314 118966604 -21350161 - AluJb SINE Alu -30 282 1 192 114 159 23 chr10 118966709 118966753 -21350012 + MIR SINE MIR 12 61 -201 250 391 0 0 chr10 118966770 118966857 -21349908 + MIR SINE MIR 21 107 -101 511 282 100 12 chr10 118966857 118967027 -21349738 + MIR SINE MIR 73 257 -5 264 225 141 54 chr10 118967021 118967155 -21349610 - MIR SINE MIR -64 144 18 * 1859 150 26 13 chr10 118967997 118968303 -21348462 - AluJb SINE Alu -2 310 1 365 291 91 0 chr10 118968303 118968413 -21348352 - MIR SINE MIR -59 149 30 900 208 33 19 chr10 118968965 118969177 -21347588 + MER20 DNA MER1_type 5 219 0 368 258 21 0 chr10 118969327 118969420 -21347345 - MIR SINE MIR -139 123 29 864 290 51 83 chr10 118969773 118970245 -21346520 + L2 LINE L2 2837 3293 -20 2112 112 0 0 chr10 118970247 118970534 -21346231 - AluSg SINE Alu -17 293 7 22 0 0 0 chr10 118972415 118972437 -21344328 + AT_rich Low_complexity Low_complexity 1 22 0 2063 104 6 29 chr10 118972911 118973046 -21343719 + AluSg SINE Alu 1 137 -203 1916 115 7 0 chr10 118973046 118973376 -21343389 + AluSx SINE Alu 1 332 0 2063 104 6 29 chr10 118973376 118973586 -21343179 + AluSg SINE Alu 137 340 0 302 313 252 0 chr10 118974179 118974326 -21342439 - MER5A DNA MER1_type 0 189 6 2046 119 6 10 chr10 118974991 118975302 -21341463 + AluSx SINE Alu 2 311 -1 288 259 43 79 chr10 118975313 118975452 -21341313 - MER5A DNA MER1_type -48 141 8 406 303 37 12 chr10 118975765 118975927 -21340838 - MIR SINE MIR -76 186 21 2204 105 3 6 chr10 118976180 118976493 -21340272 + AluSx SINE Alu 1 312 0 454 210 188 54 chr10 118977980 118978166 -21338599 + MIR SINE MIR 52 262 0 359 330 45 16 chr10 118979433 118979621 -21337144 + MIR SINE MIR 17 214 -47 455 204 38 97 chr10 118979737 118979923 -21336842 - MER102a DNA MER1_type 0 330 156 489 269 54 7 chr10 118980059 118980208 -21336557 - MIR3 SINE MIR -7 201 46 790 184 27 0 chr10 118981623 118981770 -21334995 - MER45A DNA AcHobo 0 178 28 966 208 98 0 chr10 118984512 118984695 -21332070 + MER58A DNA MER1_type 24 224 0 2075 127 3 0 chr10 118984777 118985084 -21331681 + AluSx SINE Alu 1 308 -4 727 213 149 5 chr10 118985959 118986147 -21330618 + MER20 DNA MER1_type 3 217 -2 243 0 0 0 chr10 118987427 118987454 -21329311 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 128 21 0 chr10 118987926 118987973 -21328792 + (CA)n Simple_repeat Simple_repeat 1 48 0 212 284 90 0 chr10 118988895 118988962 -21327803 + MER5C DNA MER1_type 3 75 -249 290 345 21 41 chr10 118989172 118989317 -21327448 - MIR SINE MIR -109 153 12 207 290 65 0 chr10 118989331 118989393 -21327372 + MIR3 SINE MIR 91 156 -52 346 205 39 13 chr10 118989498 118989576 -21327189 - MIR SINE MIR -102 160 81 636 286 65 0 chr10 118990452 118990637 -21326128 - MIR SINE MIR -47 215 19 268 339 24 8 chr10 118992593 118992717 -21324048 + MIR SINE MIR 41 166 -96 363 282 183 0 chr10 118993808 118993939 -21322826 + MIR SINE MIR 1 155 -107 314 261 39 100 chr10 118994245 118994290 -21322475 - MIR3 SINE MIR -21 187 141 1968 114 0 7 chr10 118994290 118994580 -21322185 - AluSg SINE Alu -2 308 21 314 261 39 100 chr10 118994580 118994664 -21322101 - MIR3 SINE MIR -67 141 66 480 266 208 14 chr10 118996195 118996402 -21320363 + MIR SINE MIR 6 252 -10 623 189 6 28 chr10 118996431 118996611 -21320154 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 223 319 29 94 chr10 118996629 118996767 -21319998 + MIR SINE MIR 16 144 -64 428 294 9 0 chr10 118997260 118997369 -21319396 + L2 LINE L2 3204 3313 0 434 297 82 16 chr10 118998290 118998478 -21318287 + MIR SINE MIR 42 239 -23 327 314 0 29 chr10 118998573 118998675 -21318090 - MIR SINE MIR -140 122 24 960 219 57 38 chr10 118999762 119000077 -21316688 + L1MC5 LINE L1 7605 7925 -36 908 264 72 21 chr10 119000490 119000837 -21315928 + L1ME3A LINE L1 5304 5673 -491 1891 156 0 0 chr10 119001535 119001842 -21314923 - AluSx SINE Alu -5 307 1 530 276 25 12 chr10 119002880 119003043 -21313722 - MER102a DNA MER1_type -105 225 61 2143 109 0 0 chr10 119003056 119003359 -21313406 + AluSg SINE Alu 1 303 -7 946 219 57 12 chr10 119003492 119003739 -21313026 - MIR SINE MIR 0 262 5 2272 78 7 0 chr10 119003971 119004267 -21312498 + AluSp SINE Alu 1 298 -15 427 317 126 10 chr10 119004936 119005072 -21311693 - Charlie8 DNA MER1_type -107 234 66 180 0 0 0 chr10 119005072 119005092 -21311673 + (CAA)n Simple_repeat Simple_repeat 2 21 0 427 317 126 10 chr10 119005092 119005154 -21311611 - Charlie8 DNA MER1_type -275 66 13 225 0 0 0 chr10 119005421 119005446 -21311319 + (A)n Simple_repeat Simple_repeat 1 25 0 224 211 14 99 chr10 119005595 119005666 -21311099 - L2 LINE L2 -5 3267 3203 380 152 43 43 chr10 119005921 119006013 -21310752 + L1ME4a LINE L1 6029 6120 -1 253 296 96 35 chr10 119007183 119007298 -21309467 + L2 LINE L2 3192 3313 0 417 205 24 55 chr10 119008610 119008737 -21308028 - MIR SINE MIR -66 196 74 231 291 70 12 chr10 119008946 119009032 -21307733 + MIR SINE MIR 108 198 -64 515 250 107 68 chr10 119009722 119009974 -21306791 + L1ME3A LINE L1 5896 6157 -13 245 179 134 45 chr10 119010361 119010387 -21306378 + L1ME4a LINE L1 5955 5977 -144 1573 106 4 21 chr10 119010387 119010623 -21306142 + AluSq SINE Alu 74 305 -8 245 179 134 45 chr10 119010623 119010663 -21306102 + L1ME4a LINE L1 5977 6027 -94 1020 226 18 26 chr10 119010808 119011034 -21305731 - MER58A DNA MER1_type 0 224 1 243 295 94 60 chr10 119011040 119011189 -21305576 + MER5A DNA MER1_type 34 187 -2 2337 101 3 0 chr10 119011961 119012269 -21304496 - AluSp SINE Alu -4 309 1 188 159 0 23 chr10 119012911 119012955 -21303810 + A-rich Low_complexity Low_complexity 3 45 0 279 0 0 0 chr10 119014990 119015021 -21301744 + (TC)n Simple_repeat Simple_repeat 2 32 0 207 0 0 0 chr10 119015020 119015043 -21301722 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 311 301 14 0 chr10 119017237 119017310 -21299455 + L2 LINE L2 3176 3249 -23 229 250 202 0 chr10 119017316 119017420 -21299345 - L2 LINE L2 -9 3263 3139 294 29 0 0 chr10 119017548 119017583 -21299182 + (A)n Simple_repeat Simple_repeat 1 35 0 2687 92 8 8 chr10 119017819 119018176 -21298589 - L1PA10 LINE L1 0 6168 5812 825 59 0 0 chr10 119018176 119018277 -21298488 + L1P4 LINE L1 5666 5766 -402 795 284 31 5 chr10 119018585 119018807 -21297958 - MIR SINE MIR -32 230 3 1680 101 4 21 chr10 119018851 119019088 -21297677 + AluSc SINE Alu 1 233 -76 365 29 29 43 chr10 119019088 119019157 -21297608 + (TAAAAA)n Simple_repeat Simple_repeat 6 73 0 632 188 281 10 chr10 119020180 119020372 -21296393 - MLT1D LTR MaLR -72 433 190 279 105 0 123 chr10 119020371 119020428 -21296337 - MLT1D LTR MaLR -573 53 4 * 463 254 25 16 chr10 119021443 119021565 -21295200 + L2 LINE L2 3187 3309 -4 742 281 104 43 chr10 119021763 119022123 -21294642 + L1ME4a LINE L1 5388 5787 -334 2260 108 20 0 chr10 119022123 119022420 -21294345 - AluSx SINE Alu -9 303 1 742 281 104 43 chr10 119022420 119022547 -21294218 + L1ME4a LINE L1 5787 5905 -216 4643 89 6 32 chr10 119022586 119023212 -21293553 + MER4B LTR ERV1 1 610 0 291 322 152 6 chr10 119023237 119023408 -21293357 - MIR SINE MIR 0 262 67 187 296 37 0 chr10 119024561 119024615 -21292150 + MER5B DNA MER1_type 4 59 -119 1470 261 55 22 chr10 119024637 119025127 -21291638 - L1M4 LINE L1 -1100 5046 4541 242 243 71 0 chr10 119025122 119025192 -21291573 + L1M4 LINE L1 5057 5131 -1015 * 2234 125 0 3 chr10 119025269 119025582 -21291183 + AluSx SINE Alu 1 312 0 707 211 35 60 chr10 119025885 119026084 -21290681 - MER20 DNA MER1_type -20 199 6 324 0 0 0 chr10 119026723 119026759 -21290006 + (CA)n Simple_repeat Simple_repeat 2 37 0 307 216 0 93 chr10 119026760 119026857 -21289908 - L1MC4 LINE L1 -1341 6701 6614 266 267 11 28 chr10 119026894 119027074 -21289691 + (CA)n Simple_repeat Simple_repeat 2 178 0 474 228 132 0 chr10 119027556 119027692 -21289073 + MIR SINE MIR 76 229 -33 363 205 24 0 chr10 119027865 119027948 -21288817 + MIR SINE MIR 112 196 -66 1187 128 128 18 chr10 119028899 119029117 -21287648 - L1MA4A LINE L1 -5 6298 6057 789 188 0 0 chr10 119029142 119029259 -21287506 - FLAM_C SINE Alu -15 118 2 294 178 0 27 chr10 119029259 119029332 -21287433 - L1MA4A LINE L1 -230 6073 6003 32 75 0 0 chr10 119029504 119029571 -21287194 + AT_rich Low_complexity Low_complexity 1 67 0 700 285 37 59 chr10 119031351 119031674 -21285091 + L2 LINE L2 2997 3312 -1 449 298 87 12 chr10 119031695 119031856 -21284909 - MER102b DNA MER1_type -16 325 153 256 319 42 8 chr10 119032878 119032997 -21283768 - LTR16C LTR ERVL -1 490 368 370 356 0 12 chr10 119033600 119033763 -21283002 - L3 LINE CR1 -722 855 695 877 249 77 75 chr10 119033914 119034383 -21282382 - LTR16C LTR ERVL 0 491 22 2456 179 50 90 chr10 119034992 119035569 -21281196 - MLT2B3 LTR ERVL 0 554 1 963 194 66 20 chr10 119035615 119035811 -21280954 - MER58C DNA MER1_type -1 214 10 2377 77 0 19 chr10 119036056 119036368 -21280397 + AluY SINE Alu 1 306 -5 506 151 20 110 chr10 119036429 119036477 -21280288 - LTR41 LTR ERVL -7 766 715 1593 188 71 9 chr10 119036477 119036801 -21279964 + MER2 DNA MER2_type 1 344 0 506 151 20 110 chr10 119036801 119036898 -21279867 - LTR41 LTR ERVL -58 715 634 1406 117 39 0 chr10 119036914 119037119 -21279646 - MLT1B LTR MaLR 0 390 178 * 1672 121 19 60 chr10 119037097 119037412 -21279353 + MER51A LTR ERV1 333 634 0 836 235 5 10 chr10 119037531 119037727 -21279038 - LTR41 LTR ERVL -578 195 1 2104 82 36 16 chr10 119038378 119038681 -21278084 - MER11A LTR ERVK 0 1266 958 17139 43 1 0 chr10 119038681 119040739 -21276026 + L1P LINE L1 594 2653 -3493 339 324 35 0 chr10 119041419 119041564 -21275201 + MIR SINE MIR 110 259 -3 21 0 0 0 chr10 119042129 119042150 -21274615 + AT_rich Low_complexity Low_complexity 1 21 0 187 274 127 85 chr10 119042367 119042579 -21274186 + L2 LINE L2 2833 3053 -219 25 0 0 0 chr10 119042651 119042676 -21274089 + AT_rich Low_complexity Low_complexity 1 25 0 267 209 0 45 chr10 119042900 119042961 -21273804 - MER58A DNA MER1_type 0 224 167 397 271 0 74 chr10 119042961 119043083 -21273682 - MER58A DNA MER1_type 0 113 1 3340 209 9 2 chr10 119043145 119043783 -21272982 + L1M2b LINE L1 1 643 -6566 1753 157 36 0 chr10 119044088 119044368 -21272397 - AluJb SINE Alu -18 294 5 220 333 56 65 chr10 119044387 119044495 -21272270 - L2 LINE L2 -57 3215 3109 431 267 27 62 chr10 119044753 119044813 -21271952 + MER5B DNA MER1_type 4 65 -113 2438 64 0 10 chr10 119044813 119045110 -21271655 + AluY SINE Alu 1 294 -17 431 267 27 62 chr10 119045110 119045195 -21271570 + MER5B DNA MER1_type 65 144 -34 327 70 0 0 chr10 119045469 119045512 -21271253 - AluSg/x SINE Alu -163 137 95 * 351 153 17 17 chr10 119045502 119045561 -21271204 - AluS SINE Alu -248 60 2 364 308 28 0 chr10 119045698 119045805 -21270960 + MLT1J LTR MaLR 290 399 -112 15409 54 71 4 chr10 119046942 119048963 -21267802 - L1P LINE L1 -3717 2429 274 294 264 165 8 chr10 119099196 119099317 -21217448 + MIR SINE MIR 8 147 -115 230 229 98 0 chr10 119099426 119099487 -21217278 + MIR SINE MIR 196 262 0 282 146 158 73 chr10 119099491 119099529 -21217236 - MIR3 SINE MIR -1 207 174 486 307 101 13 chr10 119099529 119099767 -21216998 - MIR SINE MIR -2 260 2 282 146 158 73 chr10 119099767 119099810 -21216955 - MIR3 SINE MIR -34 174 119 196 233 17 50 chr10 119099972 119100032 -21216733 + MIR SINE MIR 88 145 -63 233 266 13 13 chr10 119100842 119100872 -21215893 + (TA)n Simple_repeat Simple_repeat 1 30 -49 2069 138 10 0 chr10 119100872 119101163 -21215602 - AluSx SINE Alu -18 294 1 233 266 13 13 chr10 119101163 119101211 -21215554 + (TA)n Simple_repeat Simple_repeat 29 79 0 2151 73 0 45 chr10 119101551 119101838 -21214927 - AluSg SINE Alu -35 275 2 1599 154 40 7 chr10 119102466 119102760 -21214005 - AluSx SINE Alu 0 303 1 201 315 46 37 chr10 119103155 119103263 -21213502 - L2 LINE L2 -4 3268 3160 1885 106 20 0 chr10 119103278 119103532 -21213233 + AluSx SINE Alu 40 298 -14 223 312 78 58 chr10 119103624 119103778 -21212987 - L2 LINE L2 -182 3090 2934 196 400 0 0 chr10 119103894 119103969 -21212796 - L2 LINE L2 -547 2767 2690 2147 89 20 14 chr10 119103969 119104262 -21212503 - AluSg1 SINE Alu -8 301 7 242 200 0 89 chr10 119104281 119104371 -21212394 - L1MA10 LINE L1 -3 6331 6250 8547 117 14 9 chr10 119104381 119105645 -21211120 - Tigger1 DNA MER2_type 0 2418 1148 2846 145 33 33 chr10 119105641 119106131 -21210634 - Tigger1 DNA MER2_type -1927 491 2 * 2052 106 4 0 chr10 119106178 119106442 -21210323 + AluSq SINE Alu 1 265 -48 1383 242 67 31 chr10 119106466 119106887 -21209878 - L1ME1 LINE L1 -139 6096 5661 1919 200 37 43 chr10 119106904 119107193 -21209572 - L1ME2 LINE L1 0 6164 5876 525 332 17 0 chr10 119107193 119107425 -21209340 - L1PB1 LINE L1 -271 5880 5645 758 142 108 0 chr10 119107428 119107548 -21209217 + AluJo SINE Alu 1 133 -169 4748 194 48 9 chr10 119107549 119108825 -21207940 - L1ME1 LINE L1 -701 5542 4215 6554 216 60 67 chr10 119108877 119111149 -21205616 - L1ME1 LINE L1 -2490 3725 1515 2096 107 7 0 chr10 119111149 119111454 -21205311 - AluSx SINE Alu 0 307 1 6554 216 60 67 chr10 119111454 119112559 -21204206 - L1ME1 LINE L1 -4700 1515 404 318 230 159 9 chr10 119112648 119112761 -21204004 + L1ME4a LINE L1 5989 6118 -3 221 128 21 0 chr10 119112781 119112828 -21203937 + T-rich Low_complexity Low_complexity 3 50 0 2109 188 72 38 chr10 119114703 119115150 -21201615 - MLT1C LTR MaLR -5 462 1 2416 88 0 10 chr10 119118446 119118753 -21198012 + AluSg SINE Alu 1 304 -6 277 320 55 108 chr10 119119168 119119530 -21197235 - L2 LINE L2 0 3272 2930 229 326 110 62 chr10 119119580 119119807 -21196958 - L2 LINE L2 -15 3257 3020 294 323 144 23 chr10 119119809 119120066 -21196699 - L2 LINE L2 -403 2911 2624 490 260 52 7 chr10 119120152 119120306 -21196459 + MER103 DNA DNA 3 163 -3 195 290 16 16 chr10 119120368 119120430 -21196335 - L2 LINE L2 -1 3271 3210 207 69 0 0 chr10 119120482 119120511 -21196254 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 559 215 70 25 chr10 119124610 119124768 -21191997 + MIR SINE MIR 98 262 0 187 289 70 44 chr10 119124782 119124896 -21191869 + MIR SINE MIR 86 202 -60 993 173 0 0 chr10 119124898 119125054 -21191711 + AluJo SINE Alu 137 292 -20 327 219 27 0 chr10 119125182 119125255 -21191510 + MIR SINE MIR 74 148 -60 192 240 20 20 chr10 119125458 119125508 -21191257 + L3 LINE CR1 1523 1572 -5 201 229 42 0 chr10 119125628 119125676 -21191089 - MIR SINE MIR -94 114 65 2433 48 41 0 chr10 119125694 119125988 -21190777 - AluY SINE Alu -5 306 1 325 343 77 77 chr10 119125988 119126277 -21190488 - L2 LINE L2 -8 3264 2973 2173 112 0 3 chr10 119126346 119126642 -21190123 + AluSg SINE Alu 1 295 -15 267 328 0 29 chr10 119128484 119128655 -21188110 + C-rich Low_complexity Low_complexity 3 168 0 2121 158 65 20 chr10 119129271 119129671 -21187094 + MSTA LTR MaLR 1 418 -10 322 264 33 33 chr10 119129671 119129792 -21186973 + L1ME LINE L1 5610 5730 -391 2049 135 7 0 chr10 119129794 119130091 -21186674 + AluSp SINE Alu 1 299 -14 2192 107 0 10 chr10 119130610 119130908 -21185857 - AluSx SINE Alu -17 295 1 196 222 0 32 chr10 119131197 119131260 -21185505 - MIR3 SINE MIR -136 72 12 336 248 14 71 chr10 119131408 119131549 -21185216 - MER5A DNA MER1_type -56 133 1 387 0 0 0 chr10 119132154 119132197 -21184568 + (TA)n Simple_repeat Simple_repeat 1 43 0 1003 237 10 0 chr10 119133366 119133573 -21183192 - MER3 DNA MER1_type 0 209 1 375 278 0 11 chr10 119133612 119133702 -21183063 + L2 LINE L2 3184 3272 0 203 167 0 0 chr10 119133763 119133805 -21182960 + C-rich Low_complexity Low_complexity 6 47 0 1934 161 6 19 chr10 119133898 119134214 -21182551 - AluJb SINE Alu 0 312 1 525 329 50 9 chr10 119134993 119135071 -21181694 - MIR SINE MIR -4 258 185 2036 126 3 19 chr10 119135071 119135380 -21181385 + AluSx SINE Alu 1 304 -8 525 329 50 9 chr10 119135380 119135523 -21181242 - MIR SINE MIR -77 185 28 195 292 125 10 chr10 119136305 119136401 -21180364 - L2 LINE L2 -27 3286 3180 2802 130 39 43 chr10 119136438 119136604 -21180161 + L1MB7 LINE L1 5655 5820 -364 1894 171 0 7 chr10 119136604 119136913 -21179852 + AluSx SINE Alu 1 307 -5 2802 130 39 43 chr10 119136913 119137146 -21179619 + L1MB7 LINE L1 5820 6054 -130 2267 106 0 0 chr10 119137146 119137439 -21179326 + AluSg SINE Alu 1 293 -17 2802 130 39 43 chr10 119137439 119137545 -21179220 + L1MB7 LINE L1 6054 6159 -25 21 0 0 0 chr10 119139263 119139284 -21177481 + AT_rich Low_complexity Low_complexity 1 21 0 1656 152 83 0 chr10 119139631 119139895 -21176870 + AluSx SINE Alu 1 286 -26 359 224 172 37 chr10 119139921 119140055 -21176710 - MIR SINE MIR -13 249 98 244 284 11 34 chr10 119140126 119140214 -21176551 + MIR SINE MIR 58 143 -65 187 406 0 0 chr10 119140430 119140494 -21176271 - L2 LINE L2 -219 3053 2990 500 304 131 11 chr10 119140572 119140763 -21176002 - MIR SINE MIR 0 262 49 298 289 66 41 chr10 119143010 119143076 -21173689 - L2 LINE L2 -3 3310 3238 1823 82 0 0 chr10 119143076 119143309 -21173456 + AluSc SINE Alu 71 303 -6 298 289 66 41 chr10 119143309 119143363 -21173402 - L2 LINE L2 -75 3238 3187 1936 157 26 0 chr10 119143496 119143801 -21172964 + AluSq SINE Alu 1 313 0 293 153 0 17 chr10 119143801 119143860 -21172905 + GA-rich Low_complexity Low_complexity 3 60 0 192 97 0 0 chr10 119145367 119145398 -21171367 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 459 269 57 46 chr10 119146340 119146515 -21170250 - MER5B DNA MER1_type 0 178 2 2248 112 0 3 chr10 119146874 119147169 -21169596 - AluSq SINE Alu -19 294 1 1295 164 30 33 chr10 119147262 119147557 -21169208 - L1MA7 LINE L1 -10 6302 6007 219 297 72 0 chr10 119147662 119147731 -21169034 + MIR SINE MIR 84 159 -49 2247 113 17 0 chr10 119147786 119148088 -21168677 - AluSg1 SINE Alu -2 307 1 475 305 50 24 chr10 119148875 119149054 -21167711 - MIR3 SINE MIR -12 196 12 1872 164 3 31 chr10 119149642 119149959 -21166806 - AluJo SINE Alu -4 308 1 1970 165 7 0 chr10 119152418 119152727 -21164038 - AluSx SINE Alu -1 311 1 257 326 84 23 chr10 119152785 119153044 -21163721 + L2 LINE L2 2715 2995 -277 1845 169 0 22 chr10 119153358 119153677 -21163088 + AluJo SINE Alu 1 312 0 2088 133 3 0 chr10 119153993 119154287 -21162478 + AluSx SINE Alu 1 295 -17 2064 91 0 0 chr10 119154289 119154541 -21162224 + AluSc SINE Alu 1 252 -57 258 105 0 0 chr10 119154826 119154864 -21161901 + (T)n Simple_repeat Simple_repeat 1 38 0 236 246 137 58 chr10 119155025 119155144 -21161621 - MER5B DNA MER1_type -54 134 7 350 242 0 17 chr10 119155355 119155475 -21161290 + CT-rich Low_complexity Low_complexity 2 119 0 2169 93 24 7 chr10 119156041 119156331 -21160434 + AluSq SINE Alu 2 296 -17 1721 112 4 0 chr10 119157488 119157720 -21159045 - AluSg/x SINE Alu -5 307 75 377 312 110 23 chr10 119157950 119158123 -21158642 - MIR3 SINE MIR -5 203 16 2411 114 3 0 chr10 119158199 119158532 -21158233 + L1PA8A LINE L1 2 335 -5540 * 16421 102 13 1 chr10 119158530 119162002 -21154763 + L1PA8A LINE L1 2913 6417 -29 28 61 0 0 chr10 119162022 119162071 -21154694 + AT_rich Low_complexity Low_complexity 1 49 0 1238 187 17 119 chr10 119162140 119162542 -21154223 + MLT1A1 LTR MaLR 1 361 -4 1896 127 45 0 chr10 119163307 119163575 -21153190 + AluSx SINE Alu 1 280 -32 342 0 0 0 chr10 119163918 119163956 -21152809 + (TG)n Simple_repeat Simple_repeat 2 39 0 408 301 170 48 chr10 119164337 119164568 -21152197 + L2 LINE L2 1894 2095 -1219 2243 129 0 3 chr10 119164568 119164879 -21151886 - AluSx SINE Alu -2 310 1 408 301 170 48 chr10 119164879 119165089 -21151676 + L2 LINE L2 2095 2389 -925 391 292 35 18 chr10 119165178 119165291 -21151474 - L2 LINE L2 -13 3259 3145 414 322 109 13 chr10 119165344 119165574 -21151191 + L2 LINE L2 2550 2801 -513 2004 148 0 3 chr10 119165893 119166196 -21150569 - AluSx SINE Alu -10 302 1 417 259 58 58 chr10 119166226 119166450 -21150315 - HAL1 LINE L1 -12 2495 2272 842 281 85 9 chr10 119166478 119166809 -21149956 - L2 LINE L2 -2 3311 2956 822 255 119 20 chr10 119166815 119167199 -21149566 - MLT1J LTR MaLR -27 484 3 241 257 0 110 chr10 119167200 119167309 -21149456 - L2 LINE L2 -342 2972 2876 1494 128 157 104 chr10 119168005 119168388 -21148377 - MER4A LTR ERV1 -1 663 261 548 125 21 10 chr10 119168388 119168484 -21148281 - MER4A LTR ERV1 -566 98 2 286 289 10 0 chr10 119168485 119168589 -21148176 - HAL1 LINE L1 -362 2145 2041 2271 110 0 0 chr10 119169261 119169562 -21147203 - AluSg SINE Alu -9 301 1 1963 126 9 25 chr10 119169779 119170096 -21146669 + AluSx SINE Alu 1 312 0 222 265 0 0 chr10 119170170 119170219 -21146546 + L2 LINE L2 3219 3267 -5 3972 142 52 19 chr10 119171265 119171886 -21144879 + L1MB7 LINE L1 5384 6036 -148 2402 81 0 3 chr10 119171886 119172184 -21144581 - AluSc SINE Alu -12 297 1 3972 142 52 19 chr10 119172184 119172338 -21144427 + L1MB7 LINE L1 6036 6184 0 2133 72 47 0 chr10 119172359 119172637 -21144128 + AluSx SINE Alu 1 291 -21 659 130 0 17 chr10 119174086 119174201 -21142564 + L1PA8 LINE L1 6060 6172 0 631 235 80 12 chr10 119174924 119175086 -21141679 + MER96 DNA MER1_type 1 173 -2 2082 122 50 11 chr10 119175437 119175797 -21140968 - THE1C LTR MaLR 0 375 2 31 58 0 0 chr10 119175997 119176049 -21140716 + AT_rich Low_complexity Low_complexity 1 52 0 1939 104 54 4 chr10 119176255 119176534 -21140231 + AluSx SINE Alu 1 293 -19 6069 192 52 38 chr10 119177799 119179500 -21137265 + L1MC1 LINE L1 3379 5055 -1278 2330 103 3 0 chr10 119179500 119179810 -21136955 + AluSq SINE Alu 1 311 -2 6069 192 52 38 chr10 119179810 119179936 -21136829 + L1MC1 LINE L1 5055 5178 -1155 1051 173 0 0 chr10 119179936 119180109 -21136656 + FAM SINE Alu 2 174 -1 6069 192 52 38 chr10 119180109 119181189 -21135576 + L1MC1 LINE L1 5178 6324 -9 1999 86 35 51 chr10 119181191 119181469 -21135296 + AluSg SINE Alu 1 275 -35 207 0 0 0 chr10 119181469 119181492 -21135273 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1999 86 35 51 chr10 119181492 119181527 -21135238 + AluSg SINE Alu 275 309 -1 24 0 0 0 chr10 119181538 119181562 -21135203 + AT_rich Low_complexity Low_complexity 1 24 0 183 80 0 0 chr10 119182187 119182212 -21134553 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 1630 146 117 78 chr10 119182327 119182465 -21134300 + MSTA LTR MaLR 3 134 -294 2326 84 3 10 chr10 119182465 119182764 -21134001 + AluSx SINE Alu 1 297 -15 1630 146 117 78 chr10 119182764 119183035 -21133730 + MSTA LTR MaLR 134 428 0 24 0 0 0 chr10 119184174 119184198 -21132567 + AT_rich Low_complexity Low_complexity 1 24 0 249 303 91 8 chr10 119184330 119184462 -21132303 - HAL1b LINE L1 -77 1271 1129 2428 87 0 0 chr10 119185856 119186166 -21130599 + AluY SINE Alu 1 310 -1 200 273 26 39 chr10 119186446 119186523 -21130242 - L2 LINE L2 -55 3217 3142 2283 126 0 0 chr10 119186823 119187133 -21129632 + AluSx SINE Alu 1 310 -2 369 0 0 0 chr10 119189834 119189875 -21126890 + (CA)n Simple_repeat Simple_repeat 2 42 0 653 230 54 69 chr10 119191226 119191430 -21125335 + MER77 LTR ERV1 1 201 -404 2333 104 0 0 chr10 119191460 119191757 -21125008 + AluSq SINE Alu 1 297 -16 393 325 93 45 chr10 119192766 119193012 -21123753 + L2 LINE L2 2720 2977 -337 443 311 46 7 chr10 119193021 119193172 -21123593 + MIR SINE MIR 33 189 -73 1463 153 130 13 chr10 119193401 119193709 -21123056 + MER2 DNA MER2_type 1 344 0 348 169 0 24 chr10 119194616 119194699 -21122066 + MER106A DNA MER1_type 156 236 0 2391 61 0 14 chr10 119194831 119195128 -21121637 + AluY SINE Alu 1 293 -18 1693 132 62 31 chr10 119198522 119198811 -21117954 - AluJb SINE Alu -14 298 1 2398 68 0 0 chr10 119198854 119199146 -21117619 + AluY SINE Alu 1 292 -19 283 291 192 20 chr10 119199146 119199287 -21117478 + MIR SINE MIR 82 252 -10 23 0 0 0 chr10 119201230 119201253 -21115512 + AT_rich Low_complexity Low_complexity 1 23 0 2206 84 14 0 chr10 119202266 119202434 -21114331 - AluSx SINE Alu -11 301 126 324 0 0 0 chr10 119202434 119202470 -21114295 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 2206 84 14 0 chr10 119202470 119202598 -21114167 - AluSx SINE Alu -186 126 1 521 286 71 15 chr10 119202632 119202828 -21113937 - MIR SINE MIR -48 214 8 372 309 33 40 chr10 119203697 119203892 -21112873 + MIR SINE MIR 16 213 -49 217 289 0 19 chr10 119206516 119206568 -21110197 - L2 LINE L2 -17 3255 3205 301 356 0 48 chr10 119206600 119206746 -21110019 - L2 LINE L2 -182 3090 2952 1189 141 10 0 chr10 119256767 119256966 -21059799 + AluSg/x SINE Alu 105 305 -5 1487 314 172 26 chr10 119256985 119257205 -21059560 + L2 LINE L2 1454 1641 -1673 1514 105 0 5 chr10 119257205 119257415 -21059350 - AluSc SINE Alu -10 299 91 1487 314 172 26 chr10 119257415 119258219 -21058546 + L2 LINE L2 1641 2627 -687 1201 138 0 6 chr10 119258290 119258471 -21058294 - AluSx SINE Alu -132 180 1 21 0 0 0 chr10 119258474 119258495 -21058270 + AT_rich Low_complexity Low_complexity 1 21 0 1229 240 48 25 chr10 119258672 119259056 -21057709 - MER113 DNA MER1_type? -41 480 85 715 186 0 0 chr10 119259056 119259185 -21057580 + FLAM_A SINE Alu 1 129 -4 1229 240 48 25 chr10 119259185 119259200 -21057565 - MER113 DNA MER1_type? -436 85 72 2191 104 3 0 chr10 119259209 119259506 -21057259 + AluSx SINE Alu 3 300 -12 477 271 0 0 chr10 119260350 119260457 -21056308 - MER81 DNA DNA -7 107 1 1113 268 76 26 chr10 119260851 119261272 -21055493 - MLT1J2 LTR MaLR -8 442 1 1068 179 11 5 chr10 119261405 119261589 -21055176 + MLT1D LTR MaLR 36 220 -285 232 191 0 0 chr10 119261596 119261638 -21055127 - MLT1G LTR MaLR -209 381 340 786 173 98 6 chr10 119261723 119261896 -21054869 - MER53 DNA DNA 0 189 1 287 177 0 167 chr10 119261996 119262092 -21054673 - MLT1G1 LTR MaLR -509 86 7 204 327 100 27 chr10 119262101 119262211 -21054554 - MIR SINE MIR -113 149 32 184 250 0 0 chr10 119262721 119262773 -21053992 + L2 LINE L2 3262 3313 0 1289 175 156 4 chr10 119263134 119263391 -21053374 - AluJb SINE Alu -6 296 1 2405 96 0 0 chr10 119263823 119264125 -21052640 - AluSg SINE Alu -8 302 1 306 269 210 19 chr10 119264143 119264414 -21052351 - L2 LINE L2 -3 3310 2988 935 258 208 12 chr10 119264532 119265012 -21051753 - MLT2F LTR ERVL -89 574 1 27 29 0 0 chr10 119265241 119265275 -21051490 + AT_rich Low_complexity Low_complexity 1 34 0 2508 63 0 13 chr10 119265286 119265588 -21051177 + AluY SINE Alu 1 298 -13 23 33 0 0 chr10 119266656 119266686 -21050079 + AT_rich Low_complexity Low_complexity 1 30 0 1156 260 93 25 chr10 119266868 119267233 -21049532 - MLT1I LTR MaLR 0 409 20 671 249 146 10 chr10 119267295 119267500 -21049265 + MIR SINE MIR 6 238 -24 289 310 11 0 chr10 119267781 119267868 -21048897 + L2 LINE L2 3185 3272 0 2192 92 3 7 chr10 119268215 119268508 -21048257 + AluSg SINE Alu 1 292 -18 405 293 113 42 chr10 119268565 119268895 -21047870 - L2 LINE L2 -218 3054 2583 834 186 104 0 chr10 119269476 119269659 -21047106 - L2 LINE L2 -694 2620 2419 879 274 152 16 chr10 119269772 119270273 -21046492 - L1M4 LINE L1 -1662 4484 3916 684 195 105 14 chr10 119270294 119270504 -21046261 - MER20B DNA MER1_type -5 778 550 733 270 137 0 chr10 119270720 119270990 -21045775 - L2 LINE L2 -1 3312 3006 306 276 71 16 chr10 119271066 119271193 -21045572 - MIR SINE MIR -15 247 114 6361 25 0 0 chr10 119271421 119272145 -21044620 + L1PA3 LINE L1 5432 6155 0 411 274 83 49 chr10 119272518 119272722 -21044043 + MLT1K LTR MaLR 214 424 -164 279 309 32 32 chr10 119272725 119272848 -21043917 - MIR3 SINE MIR -83 125 3 537 259 149 0 chr10 119273478 119273652 -21043113 - MIR SINE MIR -57 205 6 294 289 35 37 chr10 119273709 119273879 -21042886 - MIR SINE MIR -62 146 16 386 196 80 36 chr10 119273940 119274052 -21042713 - MIR3 SINE MIR -54 154 38 419 231 60 37 chr10 119274886 119275020 -21041745 - L2 LINE L2 -1 3312 3176 295 303 67 42 chr10 119278971 119279090 -21037675 + L2 LINE L2 3104 3225 -47 511 144 18 0 chr10 119279355 119279466 -21037299 + GA-rich Low_complexity Low_complexity 2 114 0 388 354 6 23 chr10 119279823 119279998 -21036767 + MLT1K LTR MaLR 129 300 -288 332 43 22 0 chr10 119280190 119280236 -21036529 + (CA)n Simple_repeat Simple_repeat 2 48 0 259 278 0 0 chr10 119280239 119280293 -21036472 + polypyrimidine Low_complexity Low_complexity 4 57 0 21 0 0 0 chr10 119280369 119280390 -21036375 + AT_rich Low_complexity Low_complexity 1 21 0 2154 132 0 0 chr10 119280393 119280688 -21036077 + AluSx SINE Alu 1 295 -17 2286 90 0 3 chr10 119281082 119281372 -21035393 + AluY SINE Alu 1 289 -22 494 332 16 40 chr10 119281762 119282015 -21034750 - L1MEd LINE L1 -5364 755 509 1057 244 124 48 chr10 119282022 119282456 -21034309 + MLT1C LTR MaLR 1 467 0 2154 223 68 8 chr10 119282573 119283062 -21033703 - LTR40a LTR ERVL 0 519 2 363 274 13 102 chr10 119283363 119283520 -21033245 - MARNA DNA Mariner -398 188 46 1580 155 69 34 chr10 119283770 119284061 -21032704 - AluJb SINE Alu -6 306 6 227 191 16 0 chr10 119284346 119284409 -21032356 + GA-rich Low_complexity Low_complexity 1 64 0 246 351 11 0 chr10 119285226 119285320 -21031445 - MIR3 SINE MIR -24 184 90 250 307 26 35 chr10 119285332 119285446 -21031319 - LTR16B LTR ERVL 0 464 352 701 271 16 27 chr10 119285456 119285644 -21031121 + LTR33 LTR ERVL 336 521 0 8571 67 7 4 chr10 119286020 119287088 -21029677 + MER11C LTR ERVK 1 1071 0 181 301 44 59 chr10 119287538 119287674 -21029091 - MIR3 SINE MIR -28 180 47 2289 116 0 7 chr10 119288005 119288315 -21028450 + AluSx SINE Alu 1 308 -4 414 279 50 19 chr10 119288356 119288517 -21028248 + MIR SINE MIR 77 242 -20 3880 152 33 19 chr10 119289648 119290366 -21026399 + L1MB2 LINE L1 5428 6155 -16 245 279 28 78 chr10 119290718 119291040 -21025725 - HAL1 LINE L1 -5 2502 2197 180 111 0 0 chr10 119292238 119292265 -21024500 + (T)n Simple_repeat Simple_repeat 1 27 0 2300 172 25 67 chr10 119292400 119292924 -21023841 + MLT1D LTR MaLR 1 502 -3 1468 159 65 35 chr10 119293120 119293145 -21023620 - AluJo SINE Alu -13 299 276 297 0 0 0 chr10 119293145 119293178 -21023587 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 423 0 0 0 chr10 119293177 119293224 -21023541 + (GA)n Simple_repeat Simple_repeat 2 48 0 1468 159 65 35 chr10 119293178 119293488 -21023277 - AluJo SINE Alu -36 276 1 306 67 0 0 chr10 119294674 119294719 -21022046 + (TG)n Simple_repeat Simple_repeat 1 45 0 275 372 13 0 chr10 119294781 119294937 -21021828 + (TG)n Simple_repeat Simple_repeat 2 159 0 645 237 140 18 chr10 119297352 119297630 -21019135 + LTR16A1 LTR ERVL 146 457 0 749 138 0 9 chr10 119298042 119298151 -21018614 + FLAM_A SINE Alu 10 117 -25 968 192 122 0 chr10 119298511 119298725 -21018040 + L1MB2 LINE L1 5892 6131 -40 278 128 43 0 chr10 119298775 119298822 -21017943 + L1MB2 LINE L1 6115 6163 -8 1051 155 0 35 chr10 119299198 119299372 -21017393 + AluJb SINE Alu 129 296 -16 2154 124 42 22 chr10 119299384 119299739 -21017026 - THE1B LTR MaLR -2 362 1 308 143 0 0 chr10 119299889 119299931 -21016834 - AluJ/FLAM SINE Alu -237 65 24 484 214 10 0 chr10 119300037 119300135 -21016630 + FRAM SINE Alu 10 108 -68 1190 198 18 110 chr10 119300401 119300801 -21015964 + MLT1A1 LTR MaLR 1 363 -2 1718 139 98 33 chr10 119302073 119302410 -21014355 - MLT1A2 LTR MaLR -1 373 15 1620 137 76 0 chr10 119303464 119303713 -21013052 - AluSx SINE Alu -44 268 1 1341 247 69 39 chr10 119303713 119304178 -21012587 + MLT1F1 LTR MaLR 89 567 0 229 344 113 6 chr10 119304572 119304732 -21012033 + L2 LINE L2 2885 3061 -211 2027 215 23 14 chr10 119304733 119305165 -21011600 - MER63B DNA MER1_type 0 436 1 21 0 0 0 chr10 119305955 119305976 -21010789 + AT_rich Low_complexity Low_complexity 1 21 0 1388 167 75 18 chr10 119306305 119306587 -21010178 - AluJo SINE Alu -14 298 1 888 164 0 0 chr10 119307248 119307388 -21009377 + FRAM SINE Alu 24 163 -13 547 268 10 58 chr10 119308269 119308474 -21008291 - MIR3 SINE MIR -3 205 11 2550 104 22 0 chr10 119309268 119309624 -21007141 + THE1B LTR MaLR 1 364 0 473 31 112 9 chr10 119309783 119310016 -21006749 + (TA)n Simple_repeat Simple_repeat 1 256 0 3353 60 0 0 chr10 119310028 119310431 -21006334 - MLT2A1 LTR ERVL -41 403 1 2254 120 13 0 chr10 119310641 119310949 -21005816 + AluSq SINE Alu 1 312 -1 672 289 30 8 chr10 119311762 119311997 -21004768 - LTR16A1 LTR ERVL -2 455 216 231 218 116 56 chr10 119312244 119312378 -21004387 - MIR SINE MIR -62 146 9 686 222 143 44 chr10 119313207 119313410 -21003355 + MIR SINE MIR 27 249 -13 2081 136 0 0 chr10 119313415 119313723 -21003042 + AluSq SINE Alu 2 309 -4 864 250 112 15 chr10 119313819 119314087 -21002678 + L2 LINE L2 3019 3312 -1 319 273 0 11 chr10 119314400 119314488 -21002277 + MER33 DNA MER1_type 2 88 -236 249 108 0 0 chr10 119315273 119315310 -21001455 + (TC)n Simple_repeat Simple_repeat 2 38 0 1296 165 52 48 chr10 119315450 119315731 -21001034 + MER33 DNA MER1_type 1 285 -2300 842 168 0 0 chr10 119315731 119315862 -21000903 + FLAM_C SINE Alu 1 131 -2 288 77 0 0 chr10 119315871 119315910 -21000855 + (TA)n Simple_repeat Simple_repeat 1 39 0 234 150 0 17 chr10 119315910 119315970 -21000795 - L1MCa LINE L1 -4362 2064 2006 * 303 214 0 24 chr10 119315921 119316005 -21000760 + L1MC4 LINE L1 6614 6695 -1347 201 74 0 0 chr10 119316016 119316043 -21000722 + (TA)n Simple_repeat Simple_repeat 2 28 0 1169 149 0 0 chr10 119316043 119316224 -21000541 + AluSg/x SINE Alu 125 305 -7 266 188 21 0 chr10 119316224 119316272 -21000493 + MER33 DNA MER1_type 276 324 0 375 226 233 8 chr10 119316777 119316910 -20999855 + MIR3 SINE MIR 34 196 -12 459 229 44 97 chr10 119317190 119317417 -20999348 + L1ME4a LINE L1 5572 5786 -335 883 140 30 2 chr10 119317451 119317890 -20998875 + (TAGA)n Simple_repeat Simple_repeat 1 451 0 351 241 41 21 chr10 119318000 119318145 -20998620 + L1ME4a LINE L1 5971 6118 -3 2138 109 0 3 chr10 119318152 119318446 -20998319 - AluSx SINE Alu -19 293 1 2015 145 0 0 chr10 119318696 119318993 -20997772 - AluSx SINE Alu -15 297 1 1705 173 79 22 chr10 119319081 119319450 -20997315 - MLT1B LTR MaLR 0 390 1 260 198 0 139 chr10 119319507 119319593 -20997172 - LTR16C LTR ERVL -264 227 154 195 42 0 0 chr10 119319841 119319865 -20996900 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1709 142 98 33 chr10 119320932 119321269 -20995496 + MLT1A2 LTR MaLR 15 373 -1 1194 198 18 110 chr10 119322541 119322941 -20993824 - MLT1A1 LTR MaLR -2 363 1 489 214 10 0 chr10 119323207 119323305 -20993460 - FRAM SINE Alu -68 108 10 310 143 0 0 chr10 119323411 119323453 -20993312 + AluJ/FLAM SINE Alu 24 65 -237 2149 127 42 22 chr10 119323603 119323958 -20992807 + THE1B LTR MaLR 1 362 -2 1005 155 0 35 chr10 119323970 119324144 -20992621 - AluJb SINE Alu -16 296 129 273 128 43 0 chr10 119324521 119324568 -20992197 - L1MB2 LINE L1 -8 6163 6115 1006 187 122 0 chr10 119324618 119324832 -20991933 - L1MB2 LINE L1 -40 6131 5892 754 138 0 9 chr10 119325192 119325301 -20991464 - FLAM_A SINE Alu -25 117 10 679 237 140 18 chr10 119325713 119325991 -20990774 - LTR16A1 LTR ERVL 0 457 146 275 372 13 0 chr10 119328406 119328562 -20988203 + (CA)n Simple_repeat Simple_repeat 2 159 0 342 61 0 0 chr10 119328624 119328673 -20988092 + (CA)n Simple_repeat Simple_repeat 1 49 0 202 362 32 32 chr10 119329165 119329259 -20987506 + MIR SINE MIR 30 123 -85 1369 155 65 35 chr10 119329859 119330123 -20986642 + AluJo SINE Alu 1 255 -57 243 0 0 0 chr10 119330123 119330150 -20986615 + (TC)n Simple_repeat Simple_repeat 2 28 0 243 61 0 0 chr10 119330149 119330182 -20986583 + (TA)n Simple_repeat Simple_repeat 1 33 0 1369 155 65 35 chr10 119330150 119330207 -20986558 + AluJo SINE Alu 255 299 -13 2297 172 25 67 chr10 119330403 119330927 -20985838 - MLT1D LTR MaLR -3 502 1 180 111 0 0 chr10 119331062 119331089 -20985676 + (A)n Simple_repeat Simple_repeat 1 27 0 262 279 28 78 chr10 119332287 119332609 -20984156 + HAL1 LINE L1 2197 2502 -5 325 242 41 113 chr10 119332758 119332952 -20983813 - L1MC4 LINE L1 -1 8041 7772 3888 151 31 19 chr10 119332961 119333681 -20983084 - L1MB2 LINE L1 -16 6155 5428 491 249 61 24 chr10 119334812 119334990 -20981775 - MIR SINE MIR -20 242 57 1994 112 44 7 chr10 119335014 119335310 -20981455 - AluSx SINE Alu -5 307 1 207 299 75 93 chr10 119335334 119335548 -20981217 + L2 LINE L2 3063 3272 0 228 303 44 57 chr10 119335637 119335801 -20980964 + MIR3 SINE MIR 42 180 -28 8557 69 7 4 chr10 119336227 119337295 -20979470 - MER11C LTR ERVK 0 1071 1 712 266 16 27 chr10 119337671 119337859 -20978906 - LTR33 LTR ERVL 0 521 336 249 307 26 35 chr10 119337869 119337983 -20978782 + LTR16B LTR ERVL 352 464 0 277 351 11 0 chr10 119337995 119338089 -20978676 + MIR3 SINE MIR 90 184 -24 248 175 16 0 chr10 119338906 119338969 -20977796 + CT-rich Low_complexity Low_complexity 1 64 0 1476 152 69 35 chr10 119339254 119339543 -20977222 + AluJb SINE Alu 6 304 -8 345 280 13 102 chr10 119339793 119339950 -20976815 + MARNA DNA Mariner 46 188 -398 2159 221 68 8 chr10 119340251 119340740 -20976025 + LTR40a LTR ERVL 2 519 0 1042 246 124 48 chr10 119340857 119341291 -20975474 - MLT1C LTR MaLR 0 467 1 480 332 16 40 chr10 119341298 119341551 -20975214 + L1MEd LINE L1 509 755 -5364 2174 86 0 3 chr10 119341941 119342231 -20974534 - AluY SINE Alu -22 289 1 1987 133 3 0 chr10 119342625 119342919 -20973846 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 119342922 119342943 -20973822 + AT_rich Low_complexity Low_complexity 1 21 0 210 71 0 0 chr10 119343058 119343086 -20973679 + (GA)n Simple_repeat Simple_repeat 1 28 0 242 56 28 0 chr10 119343088 119343124 -20973641 + (TG)n Simple_repeat Simple_repeat 2 38 0 399 354 6 23 chr10 119343316 119343491 -20973274 - MLT1K LTR MaLR -288 300 129 470 139 26 9 chr10 119343848 119343963 -20972802 + CT-rich Low_complexity Low_complexity 2 118 0 334 303 67 42 chr10 119344228 119344347 -20972418 - L2 LINE L2 -47 3225 3104 359 279 79 118 chr10 119347966 119348432 -20968333 + L2 LINE L2 2824 3271 -1 407 202 73 37 chr10 119349276 119349385 -20967380 + MIR3 SINE MIR 49 161 -47 361 295 55 38 chr10 119349444 119349627 -20967138 + MIR SINE MIR 19 204 -58 615 259 149 0 chr10 119349666 119349840 -20966925 + MIR SINE MIR 6 205 -57 318 285 41 41 chr10 119350470 119350593 -20966172 + MIR3 SINE MIR 3 125 -83 422 274 83 49 chr10 119350596 119350800 -20965965 - MLT1K LTR MaLR -164 424 214 225 291 23 12 chr10 119351199 119351285 -20965480 + LTR67 LTR ERVL 431 517 -40 291 148 19 19 chr10 119351316 119351370 -20965395 - MLT1K LTR MaLR -370 218 165 777 260 89 20 chr10 119351773 119352077 -20964688 + LTR16A1 LTR ERVL 126 450 -7 203 100 0 25 chr10 119353118 119353158 -20963607 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 874 88 0 15 chr10 119353161 119353297 -20963468 + (GGAA)n Simple_repeat Simple_repeat 4 137 0 639 161 15 22 chr10 119353350 119353487 -20963278 - MER33 DNA MER1_type 0 363 228 506 188 42 83 chr10 119353494 119353686 -20963079 - MER33 DNA MER1_type -99 225 42 298 264 56 0 chr10 119353690 119353762 -20963003 - L2 LINE L2 -49 3264 3189 200 345 79 30 chr10 119353794 119353959 -20962806 + L2 LINE L2 1890 2062 -1252 339 293 130 8 chr10 119354195 119354318 -20962447 - L2 LINE L2 -7 3306 3169 267 327 72 31 chr10 119354330 119354538 -20962227 - L2 LINE L2 -267 3046 2818 2157 123 39 28 chr10 119354538 119354895 -20961870 + THE1B LTR MaLR 4 364 0 267 327 72 31 chr10 119354895 119354942 -20961823 - L2 LINE L2 -495 2818 2774 432 273 58 13 chr10 119355785 119355939 -20960826 + MIR SINE MIR 91 251 -11 351 154 0 0 chr10 119355943 119356008 -20960757 + (ATG)n Simple_repeat Simple_repeat 3 67 0 253 297 101 50 chr10 119356761 119357205 -20959560 - HAL1b LINE L1 -568 780 314 398 279 39 23 chr10 119357410 119357539 -20959226 + MIR SINE MIR 62 192 -70 482 262 184 0 chr10 119357947 119358088 -20958677 + MER5A DNA MER1_type 17 183 -6 339 343 0 0 chr10 119358825 119358924 -20957841 + L2 LINE L2 3201 3299 -14 860 195 0 30 chr10 119359210 119359374 -20957391 + FRAM SINE Alu 5 163 -3 351 0 0 0 chr10 119360327 119360366 -20956399 + (A)n Simple_repeat Simple_repeat 1 39 0 219 139 0 0 chr10 119360674 119360710 -20956055 + (A)n Simple_repeat Simple_repeat 1 36 0 275 176 191 0 chr10 119362356 119362424 -20954341 - MER63 DNA MER1_type -3 1057 977 332 250 0 0 chr10 119362438 119362506 -20954259 - MER63 DNA MER1_type -316 745 678 524 247 81 17 chr10 119363005 119363179 -20953586 + L2 LINE L2 2160 2344 -970 615 267 248 5 chr10 119363179 119363664 -20953101 + L2 LINE L2 2713 3313 0 732 311 82 11 chr10 119363683 119364062 -20952703 + L2 LINE L2 2373 2778 -536 569 248 23 56 chr10 119364151 119364365 -20952400 - L2 LINE L2 -1 3312 3106 963 254 208 12 chr10 119364505 119364985 -20951780 + MLT2F LTR ERVL 1 574 -89 325 272 206 18 chr10 119365103 119365375 -20951390 + L2 LINE L2 2988 3310 -3 2346 100 3 0 chr10 119365393 119365694 -20951071 + AluSg SINE Alu 1 302 -8 1289 175 156 4 chr10 119366126 119366383 -20950382 + AluJb SINE Alu 1 296 -6 187 250 0 0 chr10 119366744 119366796 -20949969 - L2 LINE L2 0 3313 3262 209 336 95 26 chr10 119367302 119367418 -20949347 + MIR SINE MIR 26 149 -113 287 177 0 167 chr10 119367427 119367523 -20949242 + MLT1G1 LTR MaLR 7 86 -509 786 173 98 6 chr10 119367623 119367796 -20948969 + MER53 DNA DNA 1 189 0 232 191 0 0 chr10 119367881 119367923 -20948842 + MLT1G LTR MaLR 340 381 -209 1081 174 11 5 chr10 119367930 119368114 -20948651 - MLT1D LTR MaLR -285 220 36 1090 266 76 26 chr10 119368247 119368668 -20948097 + MLT1J2 LTR MaLR 1 442 -8 470 271 0 0 chr10 119369062 119369169 -20947596 + MER81 DNA DNA 1 107 -7 2318 107 3 0 chr10 119370013 119370313 -20946452 - AluSx SINE Alu -9 303 3 1267 239 50 20 chr10 119370322 119370337 -20946428 + MER113 DNA MER1_type? 72 85 -436 686 189 0 0 chr10 119370337 119370464 -20946301 - FLAM_A SINE Alu -6 127 1 1267 239 50 20 chr10 119370464 119370845 -20945920 + MER113 DNA MER1_type? 85 480 -41 1287 314 194 28 chr10 119370859 119371046 -20945719 + L2 LINE L2 1205 1360 -1954 2320 113 0 3 chr10 119371046 119371357 -20945408 + AluSx SINE Alu 1 310 -2 1287 314 194 28 chr10 119371357 119371596 -20945169 + L2 LINE L2 1360 1558 -1756 1576 106 0 5 chr10 119371596 119371803 -20944962 - AluSc SINE Alu -13 296 91 1287 314 194 28 chr10 119371803 119372823 -20943942 + L2 LINE L2 1558 2892 -422 205 170 0 57 chr10 119372823 119372876 -20943889 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 2315 88 7 13 chr10 119373203 119373511 -20943254 - AluSq SINE Alu -7 306 1 2923 180 22 24 chr10 119373870 119374458 -20942307 + L1MB8 LINE L1 5590 6176 -2 962 184 0 0 chr10 119374492 119374655 -20942110 - FRAM SINE Alu -13 163 1 774 168 0 0 chr10 119374761 119374880 -20941885 - FLAM_C SINE Alu -20 123 5 1418 219 58 12 chr10 119375059 119375387 -20941378 - MLT1A1 LTR MaLR 0 365 23 24 0 0 0 chr10 119375521 119375545 -20941220 + AT_rich Low_complexity Low_complexity 1 24 0 871 259 154 37 chr10 119377180 119377563 -20939202 - L1ME4a LINE L1 -3 6118 5691 4162 163 31 52 chr10 119377973 119378208 -20938557 - L1MB4 LINE L1 -2 6178 5940 2282 96 3 0 chr10 119378208 119378499 -20938266 + AluSq SINE Alu 1 292 -21 4162 163 31 52 chr10 119378499 119378970 -20937795 - L1MB4 LINE L1 -240 5940 5461 2598 54 0 13 chr10 119378970 119379283 -20937482 - AluY SINE Alu -2 309 1 195 42 0 0 chr10 119379285 119379309 -20937456 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4162 163 31 52 chr10 119379309 119379440 -20937325 - L1MB4 LINE L1 -720 5460 5354 2298 90 0 3 chr10 119379440 119379752 -20937013 - AluY SINE Alu 0 311 1 4162 163 31 52 chr10 119379752 119379803 -20936962 - L1MB4 LINE L1 -826 5354 5303 1743 182 68 18 chr10 119381372 119381757 -20935008 - L1MC2 LINE L1 0 6344 5941 268 285 41 27 chr10 119381833 119382008 -20934757 - MIR SINE MIR -14 248 4 1144 170 83 0 chr10 119382156 119382374 -20934391 + MER46A DNA MER2_type 1 236 0 5436 161 6 22 chr10 119382437 119383512 -20933253 + L1MB3 LINE L1 5126 6182 -1 395 273 58 54 chr10 119383805 119383989 -20932776 - MIR SINE MIR -23 185 1 245 292 21 21 chr10 119384109 119384205 -20932560 - MIR SINE MIR -93 169 74 513 295 91 5 chr10 119385413 119385623 -20931142 + MIR SINE MIR 25 252 -10 2412 87 0 3 chr10 119385811 119386111 -20930654 + AluY SINE Alu 1 299 -12 287 100 0 0 chr10 119386487 119386527 -20930238 - Alu SINE Alu -6 296 257 718 160 8 0 chr10 119386529 119386648 -20930117 - AluJo/FLAM SINE Alu -189 123 4 408 246 157 0 chr10 119386950 119387084 -20929681 - MER112 DNA MER1_type -98 162 8 201 302 23 23 chr10 119387122 119387208 -20929557 + L2 LINE L2 3223 3308 -5 205 171 0 0 chr10 119387211 119387246 -20929519 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 1691 204 57 46 chr10 119387582 119387859 -20928906 + L1ME1 LINE L1 5722 6007 -159 2180 125 39 33 chr10 119387859 119388220 -20928545 + THE1B LTR MaLR 1 363 -1 1691 204 57 46 chr10 119388220 119388378 -20928387 + L1ME1 LINE L1 6007 6162 -4 231 313 62 18 chr10 119390091 119390203 -20926562 + L2 LINE L2 3156 3272 0 306 73 0 0 chr10 119390207 119390248 -20926517 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 298 342 153 9 chr10 119390959 119391187 -20925578 - MIR SINE MIR -1 261 1 192 125 0 0 chr10 119391291 119391323 -20925442 + (GA)n Simple_repeat Simple_repeat 1 32 0 1168 46 34 6 chr10 119391333 119391508 -20925257 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1176 73 0 13 chr10 119391514 119391743 -20925022 + AluY SINE Alu 157 383 0 2118 112 0 20 chr10 119393133 119393437 -20923328 - AluSg SINE Alu -12 298 1 1276 146 33 5 chr10 119393509 119393722 -20923043 - MER20 DNA MER1_type 0 219 1 330 280 42 42 chr10 119395122 119395265 -20921500 - MIR SINE MIR -70 192 50 841 136 233 34 chr10 119395784 119395846 -20920919 + L1MB5 LINE L1 5715 5763 -411 204 40 0 0 chr10 119395846 119395871 -20920894 + (TG)n Simple_repeat Simple_repeat 2 26 0 841 136 233 34 chr10 119395871 119396014 -20920751 + L1MB5 LINE L1 5763 5961 -213 974 162 68 12 chr10 119396023 119396250 -20920515 - L1MB7 LINE L1 -13 6161 5937 453 286 98 10 chr10 119396298 119396501 -20920264 - L2 LINE L2 -1126 2188 1968 1017 290 36 12 chr10 119396509 119396844 -20919921 - L1MB7 LINE L1 -2206 5602 5260 1647 173 38 42 chr10 119397635 119397948 -20918817 + AluJb SINE Alu 1 312 0 449 363 47 9 chr10 119398318 119398530 -20918235 + MIR SINE MIR 15 234 -28 1200 162 56 112 chr10 119400317 119400638 -20916127 + MLT1B LTR MaLR 1 303 -87 759 270 31 35 chr10 119401702 119401961 -20914804 - MIR SINE MIR -1 261 4 2180 118 10 0 chr10 119402047 119402352 -20914413 + AluSx SINE Alu 1 308 -4 2549 65 0 0 chr10 119403730 119404038 -20912727 - AluY SINE Alu -3 308 1 2483 52 0 52 chr10 119404179 119404504 -20912261 - AluY SINE Alu -3 308 1 226 160 20 20 chr10 119405702 119405752 -20911013 - MIR SINE MIR -54 208 159 229 181 0 28 chr10 119405927 119405999 -20910766 + GA-rich Low_complexity Low_complexity 3 72 0 921 187 33 0 chr10 119406677 119406903 -20909862 - AluJo SINE Alu 0 328 97 26 30 0 0 chr10 119407128 119407161 -20909604 + AT_rich Low_complexity Low_complexity 1 33 0 2234 113 3 0 chr10 119408732 119409034 -20907731 + AluSq SINE Alu 1 303 -10 33 0 0 0 chr10 119409528 119409561 -20907204 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr10 119409720 119409740 -20907025 + (A)n Simple_repeat Simple_repeat 1 20 0 394 236 11 73 chr10 119410606 119410797 -20905968 + G-rich Low_complexity Low_complexity 2 180 0 312 175 0 0 chr10 119411114 119411177 -20905588 + (CGG)n Simple_repeat Simple_repeat 3 65 0 21 0 0 0 chr10 119411860 119411881 -20904884 + GC_rich Low_complexity Low_complexity 1 21 0 254 229 0 0 chr10 119412162 119412223 -20904542 + C-rich Low_complexity Low_complexity 3 63 0 186 43 0 0 chr10 119412223 119412246 -20904519 + (CCG)n Simple_repeat Simple_repeat 2 24 0 351 113 0 0 chr10 119412988 119413041 -20903724 + (T)n Simple_repeat Simple_repeat 1 53 0 24 67 0 0 chr10 119413925 119413970 -20902795 + AT_rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr10 119414416 119414440 -20902325 + (A)n Simple_repeat Simple_repeat 1 24 0 204 125 0 0 chr10 119415177 119415209 -20901556 + (A)n Simple_repeat Simple_repeat 1 32 0 2530 68 0 0 chr10 119417396 119417703 -20899062 - AluY SINE Alu -3 308 2 1067 142 0 7 chr10 119417721 119417876 -20898889 - AluJb SINE Alu -22 290 137 788 188 0 0 chr10 119417921 119418059 -20898706 - FLAM_C SINE Alu -4 139 2 243 227 91 104 chr10 119419779 119419920 -20896845 - L3b LINE CR1 -178 1405 1267 2007 155 7 0 chr10 119419920 119420224 -20896541 + AluJo SINE Alu 1 306 -6 243 227 91 104 chr10 119420224 119420302 -20896463 - L3b LINE CR1 -316 1267 1189 39 22 0 0 chr10 119420646 119420692 -20896073 + AT_rich Low_complexity Low_complexity 1 46 0 1660 174 0 46 chr10 119420812 119421117 -20895648 - AluJb SINE Alu -19 293 3 743 182 0 0 chr10 119421120 119421252 -20895513 - AluJo/FLAM SINE Alu -169 133 2 507 226 225 19 chr10 119421537 119421777 -20894988 - MER33 DNA MER1_type 0 363 38 2154 134 0 0 chr10 119422265 119422564 -20894201 - AluJb SINE Alu -13 299 1 339 164 0 0 chr10 119425412 119425473 -20891292 + (TA)n Simple_repeat Simple_repeat 2 62 0 1350 161 19 140 chr10 119425501 119425880 -20890885 - MER46C DNA MER2_type -5 333 1 200 263 25 62 chr10 119426232 119426312 -20890453 - L3 LINE CR1 -7 1570 1494 210 176 0 0 chr10 119426342 119426376 -20890389 + A-rich Low_complexity Low_complexity 1 34 0 1669 157 19 28 chr10 119427682 119428006 -20888759 + L1MB5 LINE L1 5854 6174 0 261 291 27 36 chr10 119428263 119428373 -20888392 + MIR SINE MIR 40 148 -114 989 280 47 24 chr10 119428391 119428773 -20887992 - MER110 LTR ERV1 -20 471 81 254 301 81 16 chr10 119429136 119429259 -20887506 + MIR SINE MIR 16 146 -62 22 0 0 0 chr10 119429327 119429349 -20887416 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 119429718 119429740 -20887025 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 403 308 109 50 chr10 119430158 119430688 -20886077 - L2 LINE L2 -5 3267 2702 203 61 30 0 chr10 119431379 119431412 -20885353 + (TG)n Simple_repeat Simple_repeat 2 35 0 588 262 34 15 chr10 119432390 119432596 -20884169 - MIR SINE MIR -40 222 13 212 258 16 0 chr10 119434185 119434247 -20882518 - L3 LINE CR1 -1 1576 1514 2390 88 0 10 chr10 119434646 119434951 -20881814 - AluSq SINE Alu -11 302 1 1858 147 0 4 chr10 119434951 119435230 -20881535 - AluJb SINE Alu -22 290 13 303 85 0 0 chr10 119436408 119436455 -20880310 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2271 91 3 0 chr10 119436459 119436744 -20880021 - AluSg SINE Alu -24 286 1 236 246 0 18 chr10 119436882 119436939 -20879826 + (TA)n Simple_repeat Simple_repeat 2 57 0 1708 179 7 3 chr10 119436963 119437264 -20879501 - AluJo SINE Alu -10 302 1 25 0 0 0 chr10 119437269 119437294 -20879471 + AT_rich Low_complexity Low_complexity 1 25 0 1972 97 23 0 chr10 119437768 119438026 -20878739 - AluSx SINE Alu -2 310 47 1815 118 12 0 chr10 119440118 119440363 -20876402 + AluSx SINE Alu 21 268 -44 1167 235 15 8 chr10 119440746 119441014 -20875751 - L1ME1 LINE L1 -21 6145 5876 183 129 0 0 chr10 119441014 119441045 -20875720 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1330 179 12 84 chr10 119441279 119441495 -20875270 - L1ME1 LINE L1 -274 5892 5706 2190 106 0 0 chr10 119441495 119441810 -20874955 - AluSx SINE Alu 0 315 1 1330 179 12 84 chr10 119441810 119441927 -20874838 - L1ME1 LINE L1 -460 5706 5582 501 188 15 1 chr10 119441927 119442188 -20874577 + AluJo SINE Alu 15 311 -1 648 181 181 28 chr10 119442197 119442379 -20874386 - L1ME1 LINE L1 -577 5589 5380 990 178 47 23 chr10 119442458 119442672 -20874093 + MER20 DNA MER1_type 1 219 0 2073 147 0 0 chr10 119442802 119443095 -20873670 - AluSx SINE Alu -19 293 1 220 263 35 88 chr10 119443389 119443503 -20873262 + MIR3 SINE MIR 95 202 -6 2321 111 73 6 chr10 119444142 119444483 -20872282 - THE1B LTR MaLR 0 364 1 357 167 133 22 chr10 119444492 119444582 -20872183 - MER5C DNA MER1_type 0 324 225 324 253 42 11 chr10 119444601 119444696 -20872069 - MER5C DNA MER1_type -200 124 27 279 294 71 16 chr10 119446119 119446245 -20870520 - MIR3 SINE MIR -23 185 53 2324 88 3 25 chr10 119446250 119446602 -20870163 - AluSx SINE Alu 0 345 1 231 268 28 14 chr10 119447002 119447073 -20869692 - MIR3 SINE MIR -2 206 135 472 258 111 101 chr10 119447135 119447631 -20869134 - L3 LINE CR1 -161 1416 916 861 246 91 82 chr10 119448100 119448386 -20868379 - L1MC4a LINE L1 -1215 6593 6300 982 183 0 12 chr10 119448386 119448550 -20868215 + FRAM SINE Alu 1 162 -4 861 246 91 82 chr10 119448550 119448714 -20868051 - L1MC4a LINE L1 -1508 6300 6139 468 242 130 25 chr10 119449998 119450375 -20866390 - MLT1H LTR MaLR 0 654 84 2124 123 3 0 chr10 119450761 119451046 -20865719 + AluSx SINE Alu 1 286 -26 223 81 27 0 chr10 119451047 119451084 -20865681 + (TA)n Simple_repeat Simple_repeat 1 38 0 529 85 28 28 chr10 119451090 119451231 -20865534 + (TATAA)n Simple_repeat Simple_repeat 4 144 0 215 91 0 23 chr10 119451343 119451387 -20865378 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 33 0 0 0 chr10 119451387 119451420 -20865345 + AT_rich Low_complexity Low_complexity 1 33 0 2198 131 27 0 chr10 119451898 119452226 -20864539 - MER1B DNA MER1_type 0 337 1 2120 126 3 0 chr10 119453000 119453294 -20863471 + AluSx SINE Alu 1 295 -17 951 204 80 5 chr10 119454637 119454838 -20861927 - MER20 DNA MER1_type 0 219 4 2330 108 3 0 chr10 119455505 119455810 -20860955 - AluSx SINE Alu -6 306 1 2295 91 0 3 chr10 119456292 119456589 -20860176 + AluY SINE Alu 14 309 -2 1873 164 0 7 chr10 119456738 119457037 -20859728 + AluJo SINE Alu 5 301 -11 2091 128 0 17 chr10 119457221 119457538 -20859227 + AluSx SINE Alu 1 312 0 291 214 34 34 chr10 119457748 119457837 -20858928 - L1ME LINE L1 -465 5656 5568 2479 83 0 6 chr10 119457901 119458214 -20858551 - AluY SINE Alu 0 311 1 1524 148 41 4 chr10 119458307 119458550 -20858215 - AluJb SINE Alu -60 252 1 1952 248 61 5 chr10 119460488 119461061 -20855704 + L1MD3 LINE L1 7375 7979 -16 2522 105 25 0 chr10 119461354 119461707 -20855058 + THE1B LTR MaLR 3 364 0 324 0 0 0 chr10 119462755 119462791 -20853974 + (TG)n Simple_repeat Simple_repeat 2 37 0 715 240 36 31 chr10 119463010 119463235 -20853530 + LTR67 LTR ERVL 331 556 -1 228 135 0 0 chr10 119464261 119464298 -20852467 + (TG)n Simple_repeat Simple_repeat 2 38 0 393 263 51 45 chr10 119464938 119465046 -20851719 - MIR SINE MIR -33 229 118 2428 138 8 10 chr10 119465046 119465437 -20851328 + MLT1B LTR MaLR 1 390 0 393 263 51 45 chr10 119465437 119465484 -20851281 - MIR SINE MIR -144 118 73 2082 135 0 16 chr10 119465525 119465837 -20850928 - AluJo SINE Alu -5 307 1 2268 110 0 3 chr10 119466350 119466660 -20850105 - AluSx SINE Alu -3 309 1 1961 133 21 0 chr10 119467111 119467396 -20849369 + AluSx SINE Alu 1 291 -21 2817 3 0 0 chr10 119469353 119469657 -20847108 + AluYa5 SINE Alu 1 304 -7 2634 55 0 0 chr10 119470072 119470382 -20846383 - AluY SINE Alu -1 310 1 25 0 0 0 chr10 119470980 119471005 -20845760 + AT_rich Low_complexity Low_complexity 1 25 0 2253 114 35 44 chr10 119471437 119471508 -20845257 - THE1B LTR MaLR 0 364 294 2169 125 10 0 chr10 119471508 119471811 -20844954 + AluSg SINE Alu 1 306 -4 2253 114 35 44 chr10 119471811 119472106 -20844659 - THE1B LTR MaLR -70 294 1 671 270 93 22 chr10 119472106 119472332 -20844433 - MIR SINE MIR -4 258 17 1713 74 32 0 chr10 119472332 119472548 -20844217 - AluSg SINE Alu -85 225 3 1922 163 33 27 chr10 119472985 119473477 -20843288 + MLT2A2 LTR ERVL 1 515 0 32 57 0 0 chr10 119473754 119473807 -20842958 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr10 119474068 119474091 -20842674 + AT_rich Low_complexity Low_complexity 1 23 0 255 224 53 13 chr10 119474305 119474381 -20842384 - L2 LINE L2 0 3272 3194 335 330 141 73 chr10 119474397 119474603 -20842162 + MIR SINE MIR 14 233 -29 2207 131 0 0 chr10 119474702 119475014 -20841751 + AluSx SINE Alu 1 312 0 2197 98 28 0 chr10 119475221 119475506 -20841259 + AluSc SINE Alu 1 293 -16 2091 109 28 0 chr10 119476300 119476585 -20840180 - AluSx SINE Alu -19 293 1 282 204 43 43 chr10 119477198 119477291 -20839474 - LTR41 LTR ERVL -8 765 673 2322 86 27 3 chr10 119477298 119477599 -20839166 + AluSq SINE Alu 1 308 -5 575 246 48 21 chr10 119478078 119478265 -20838500 - LTR41 LTR ERVL -581 192 1 277 243 63 27 chr10 119478361 119478465 -20838300 + MIR3 SINE MIR 83 160 -48 368 238 129 6 chr10 119478878 119479035 -20837730 + L1MEc LINE L1 2207 2353 -4073 2203 111 0 10 chr10 119479055 119479362 -20837403 - AluSx SINE Alu -8 304 1 2051 134 10 0 chr10 119479364 119479655 -20837110 - AluSx SINE Alu -18 294 1 441 0 0 0 chr10 119480085 119480134 -20836631 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 119480947 119480970 -20835795 + AT_rich Low_complexity Low_complexity 1 23 0 430 306 89 6 chr10 119481036 119481216 -20835549 - MIR SINE MIR -40 222 28 2044 141 3 7 chr10 119481355 119481659 -20835106 + AluJb SINE Alu 6 308 -4 276 274 110 0 chr10 119482046 119482119 -20834646 + MIR SINE MIR 50 130 -78 2074 133 46 27 chr10 119487614 119487982 -20828783 + THE1C LTR MaLR 1 375 0 1797 164 7 26 chr10 119489178 119489488 -20827277 - AluJb SINE Alu -8 304 1 303 346 24 39 chr10 119489499 119489626 -20827139 + L2 LINE L2 3148 3272 0 1865 140 3 27 chr10 119491227 119491527 -20825238 - AluJo SINE Alu -19 293 1 1640 164 30 33 chr10 119493732 119494031 -20822734 - AluJo SINE Alu -14 298 1 22 35 0 0 chr10 119494152 119494181 -20822584 + AT_rich Low_complexity Low_complexity 1 29 0 219 250 130 78 chr10 119494277 119494469 -20822296 + MIR SINE MIR 48 249 -13 202 214 0 71 chr10 119495326 119495396 -20821369 + GA-rich Low_complexity Low_complexity 3 67 0 855 234 92 13 chr10 119495397 119495636 -20821129 + MIR SINE MIR 5 262 0 313 368 11 0 chr10 119495715 119495810 -20820955 - MIR SINE MIR -97 111 16 489 287 63 0 chr10 119495920 119496063 -20820702 + MIR SINE MIR 77 228 -34 1528 163 38 75 chr10 119496397 119496717 -20820048 + AluJb SINE Alu 1 308 -4 2140 119 24 0 chr10 119496913 119497206 -20819559 - AluSx SINE Alu -12 300 1 185 263 0 0 chr10 119497820 119497858 -20818907 + L2 LINE L2 3186 3223 -49 280 255 87 13 chr10 119498129 119498278 -20818487 + Charlie7 DNA MER1_type 2453 2612 0 21 0 0 0 chr10 119499125 119499146 -20817619 + AT_rich Low_complexity Low_complexity 1 21 0 418 291 67 55 chr10 119499665 119499830 -20816935 - L2 LINE L2 0 3272 3106 912 248 47 0 chr10 119499875 119500089 -20816676 - MER58A DNA MER1_type 0 224 1 263 323 0 0 chr10 119500233 119500298 -20816467 + L2 LINE L2 3239 3303 -10 1143 337 167 37 chr10 119500318 119501871 -20814894 - L2 LINE L2 -459 2855 1100 1709 60 39 0 chr10 119503662 119503896 -20812869 + MER75B DNA T2_type 1 243 0 2116 134 0 0 chr10 119504213 119504512 -20812253 + AluSg SINE Alu 1 299 -11 1934 110 0 85 chr10 119504997 119505131 -20811634 + AluSx SINE Alu 1 145 -167 2439 89 3 3 chr10 119505131 119505444 -20811321 + AluSp SINE Alu 1 313 0 1934 110 0 85 chr10 119505444 119505666 -20811099 + AluSx SINE Alu 145 312 0 1858 127 35 0 chr10 119505667 119505926 -20810839 - AluSx SINE Alu -10 302 35 200 322 0 0 chr10 119506447 119506506 -20810259 + L2 LINE L2 3251 3309 -4 2349 113 0 0 chr10 119506655 119506964 -20809801 + AluSx SINE Alu 1 309 -3 304 293 12 12 chr10 119507177 119507259 -20809506 + L2 LINE L2 3209 3290 -23 23 0 0 0 chr10 119507297 119507320 -20809445 + AT_rich Low_complexity Low_complexity 1 23 0 786 289 68 32 chr10 119507383 119507691 -20809074 - L2 LINE L2 0 3313 2995 * 788 199 104 50 chr10 119507684 119507925 -20808840 - L2 LINE L2 -792 2522 2269 383 192 154 0 chr10 119507948 119508026 -20808739 - L2 LINE L2 -1008 2306 2217 2505 228 99 60 chr10 119508027 119508275 -20808490 - L1MEc LINE L1 -5253 1143 906 1783 130 38 38 chr10 119508275 119508567 -20808198 - AluJo SINE Alu -18 294 3 2505 228 99 60 chr10 119508567 119509365 -20807400 - L1MEc LINE L1 -5490 906 56 327 215 66 25 chr10 119510853 119510974 -20805791 - L1MEc LINE L1 -5872 524 399 22 70 0 0 chr10 119511402 119511445 -20805320 + AT_rich Low_complexity Low_complexity 1 43 0 240 135 58 0 chr10 119511764 119511816 -20804949 + AluSc SINE Alu 245 299 0 21 57 0 0 chr10 119513273 119513308 -20803457 + AT_rich Low_complexity Low_complexity 1 35 0 459 295 16 38 chr10 119513381 119513564 -20803201 + LTR33 LTR ERVL 10 188 -333 527 248 25 12 chr10 119513638 119513799 -20802966 + LTR33 LTR ERVL 354 516 -5 256 361 54 23 chr10 119514425 119514555 -20802210 + L3 LINE CR1 464 597 -980 301 367 48 68 chr10 119514600 119514911 -20801854 - L2 LINE L2 -78 3194 2890 1776 153 24 24 chr10 119515221 119515515 -20801250 + AluJb SINE Alu 1 294 -18 226 352 11 11 chr10 119515578 119515669 -20801096 + MER5A DNA MER1_type 9 99 -90 214 278 0 0 chr10 119515666 119515720 -20801045 + MIR SINE MIR 147 200 -62 * 497 194 36 22 chr10 119515934 119516073 -20800692 + L1MEd LINE L1 454 594 -5936 262 245 39 78 chr10 119516157 119516259 -20800506 + L1MEd LINE L1 872 969 -5561 430 252 27 9 chr10 119516502 119516613 -20800152 + MIR SINE MIR 150 262 0 897 60 0 0 chr10 119516902 119517018 -20799747 + (GGGAA)n Simple_repeat Simple_repeat 2 117 0 1111 88 0 11 chr10 119517022 119517203 -20799562 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 357 43 0 0 chr10 119517202 119517249 -20799516 + (CAGG)n Simple_repeat Simple_repeat 2 48 0 * 225 259 19 0 chr10 119517589 119517643 -20799122 - L2 LINE L2 -41 3231 3177 21 0 0 0 chr10 119517944 119517965 -20798800 + AT_rich Low_complexity Low_complexity 1 21 0 2190 116 0 7 chr10 119518030 119518322 -20798443 - AluSx SINE Alu -22 290 1 3652 236 69 27 chr10 119518729 119518837 -20797928 + L1MEd LINE L1 2261 2363 -4177 3570 173 34 58 chr10 119518837 119519441 -20797324 + MER44D DNA MER2_type 1 457 -2030 1703 173 18 3 chr10 119519441 119519724 -20797041 + AluJo SINE Alu 12 298 -14 3570 173 34 58 chr10 119519724 119519866 -20796899 + MER44D DNA MER2_type 457 601 -4 3652 236 69 27 chr10 119519866 119520875 -20795890 + L1MEd LINE L1 2363 3328 -3212 2305 102 0 0 chr10 119520875 119521178 -20795587 + AluSq SINE Alu 1 303 -10 3652 236 69 27 chr10 119521178 119521299 -20795466 + L1MEd LINE L1 3328 3442 -3098 1965 161 0 3 chr10 119521299 119521610 -20795155 + AluJb SINE Alu 1 310 -2 3652 236 69 27 chr10 119521610 119522075 -20794690 + L1MEd LINE L1 3442 4033 -2507 2220 177 36 51 chr10 119522077 119522630 -20794135 + L1MB8 LINE L1 5634 6178 0 1094 170 129 27 chr10 119522687 119522764 -20794001 - MER33 DNA MER1_type -2261 324 256 2184 113 0 0 chr10 119522764 119523085 -20793680 + AluSq SINE Alu 1 313 0 1094 170 129 27 chr10 119523085 119523301 -20793464 - MER33 DNA MER1_type -2329 256 1 1992 135 6 25 chr10 119523812 119524130 -20792635 + AluSq SINE Alu 1 312 -1 1983 147 0 26 chr10 119524550 119524863 -20791902 - AluJb SINE Alu -7 305 1 1123 154 62 14 chr10 119525382 119525590 -20791175 + MER20 DNA MER1_type 2 219 0 240 256 58 66 chr10 119525802 119525923 -20790842 - MIR SINE MIR -5 257 138 601 185 199 7 chr10 119525937 119526088 -20790677 + AluJo SINE Alu 120 299 -13 231 239 152 76 chr10 119526104 119526196 -20790569 - MIR SINE MIR -136 126 28 720 279 169 13 chr10 119526226 119526527 -20790238 - L2 LINE L2 0 3313 2966 2167 87 4 0 chr10 119526762 119527039 -20789726 + AluSc SINE Alu 29 306 -3 1620 184 0 26 chr10 119527044 119527353 -20789412 + AluJb SINE Alu 1 301 -11 2222 124 0 0 chr10 119527359 119527657 -20789108 + AluSx SINE Alu 1 298 -14 1774 161 48 3 chr10 119527694 119528048 -20788717 + L1MA9 LINE L1 5938 6307 -5 228 311 132 9 chr10 119528290 119528396 -20788369 - MIR SINE MIR -76 186 68 584 291 29 12 chr10 119528574 119528746 -20788019 + MIR SINE MIR 31 205 -57 2447 143 42 2 chr10 119529084 119529539 -20787226 + L1MB2 LINE L1 5668 6140 -31 342 0 0 0 chr10 119531436 119531474 -20785291 + (TG)n Simple_repeat Simple_repeat 2 39 0 2213 114 0 7 chr10 119531485 119531792 -20784973 - AluSq SINE Alu -7 306 2 202 213 64 0 chr10 119532307 119532354 -20784411 + L2 LINE L2 3259 3308 -5 2164 101 3 0 chr10 119532782 119533069 -20783696 + AluSg1 SINE Alu 1 288 -21 1246 98 0 12 chr10 119533069 119533233 -20783532 + AluSg/x SINE Alu 134 295 -17 2175 81 0 0 chr10 119534386 119534657 -20782108 - AluSc SINE Alu -6 303 33 1518 169 7 78 chr10 119535071 119535367 -20781398 + AluJo SINE Alu 21 295 -17 1056 216 97 44 chr10 119535869 119536231 -20780534 + LTR8 LTR ERV1 311 691 0 326 215 127 13 chr10 119536313 119536392 -20780373 - L2 LINE L2 -1 3312 3225 21 0 0 0 chr10 119536570 119536591 -20780174 + AT_rich Low_complexity Low_complexity 1 21 0 2196 123 7 0 chr10 119536605 119536913 -20779852 - AluSx SINE Alu -2 310 1 957 204 0 0 chr10 119537286 119537443 -20779322 - AluJo SINE Alu -30 282 126 1513 188 29 14 chr10 119537716 119537993 -20778772 - AluJo SINE Alu -30 282 2 1576 165 0 50 chr10 119538634 119538937 -20777828 + AluJo SINE Alu 11 298 -14 203 359 22 22 chr10 119540550 119540642 -20776123 - MIR SINE MIR -105 103 12 1041 233 83 64 chr10 119542706 119543485 -20773280 + L1MC4a LINE L1 6451 7216 -632 285 296 16 16 chr10 119543508 119543633 -20773132 + L1MC4 LINE L1 7345 7469 -573 830 137 30 15 chr10 119543818 119543949 -20772816 + AluJo SINE Alu 1 133 -169 757 208 74 0 chr10 119544007 119544156 -20772609 + AluJo SINE Alu 137 296 -16 225 196 0 22 chr10 119544156 119544202 -20772563 + GA-rich Low_complexity Low_complexity 1 45 0 3379 178 46 46 chr10 119544307 119545192 -20771573 + L1MC3 LINE L1 6835 7722 -63 2177 97 6 34 chr10 119545192 119545513 -20771252 - AluSx SINE Alu 0 312 1 3379 178 46 46 chr10 119545513 119545568 -20771197 + L1MC3 LINE L1 7721 7775 -10 1031 193 217 38 chr10 119545579 119546030 -20770735 - LTR64 LTR ERVK -4 554 23 288 206 82 21 chr10 119546097 119546194 -20770571 + L1MC5 LINE L1 7757 7859 -102 491 317 98 18 chr10 119547575 119547799 -20768966 - MIR SINE MIR 0 262 21 2230 74 10 3 chr10 119547837 119548134 -20768631 - AluSq SINE Alu -14 299 1 2075 113 31 3 chr10 119548942 119549233 -20767532 + AluSx SINE Alu 1 299 -13 209 326 125 49 chr10 119549371 119549555 -20767210 + L3 LINE CR1 908 1105 -472 2458 55 10 0 chr10 119550061 119550354 -20766411 - AluY SINE Alu -15 296 1 361 269 189 19 chr10 119550778 119551042 -20765723 - L1ME4a LINE L1 -13 6108 5800 1074 113 15 10 chr10 119551071 119551276 -20765489 - AluSq SINE Alu -10 303 4 258 270 70 70 chr10 119551280 119551480 -20765285 - L1ME4a LINE L1 -392 5729 5530 2224 121 0 0 chr10 119552562 119552860 -20763905 - AluSx SINE Alu -14 298 1 2298 108 0 3 chr10 119552954 119553259 -20763506 - AluSq SINE Alu -9 304 1 2420 73 0 7 chr10 119553634 119553935 -20762830 - AluY SINE Alu -12 299 1 298 159 239 34 chr10 119604452 119604540 -20712225 - FLAM_C SINE Alu 0 133 28 656 238 12 31 chr10 119605746 119605906 -20710859 + AluJb SINE Alu 126 282 -30 194 0 39 0 chr10 119605910 119605936 -20710829 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1082 244 115 90 chr10 119605936 119606108 -20710657 - L1ME3A LINE L1 -2 6168 6002 2108 122 0 16 chr10 119606108 119606419 -20710346 - AluY SINE Alu -1 310 5 1082 244 115 90 chr10 119606419 119606943 -20709822 - L1ME3A LINE L1 -168 6002 5455 1184 202 27 8 chr10 119607406 119607668 -20709097 - L1MD3 LINE L1 0 7995 7729 264 266 0 0 chr10 119607667 119607731 -20709034 - L1MC/D LINE L1 -1982 5826 5763 * 288 185 62 0 chr10 119607741 119607806 -20708959 - L1ME4a LINE L1 -639 5523 5455 220 342 66 0 chr10 119607816 119607892 -20708873 + MIR3 SINE MIR 104 184 -24 276 250 139 42 chr10 119607956 119608100 -20708665 - L1MC/D LINE L1 -2070 5738 5581 553 289 148 4 chr10 119610123 119610393 -20706372 + L1ME LINE L1 5490 5798 -323 274 162 221 0 chr10 119610393 119610461 -20706304 + MIR SINE MIR 147 229 -33 235 204 148 34 chr10 119610486 119610574 -20706191 + L1ME LINE L1 5800 5897 -224 502 210 181 7 chr10 119610610 119610748 -20706017 + MIR SINE MIR 67 228 -34 2360 89 0 19 chr10 119610957 119611273 -20705492 - AluSp SINE Alu -3 310 1 905 174 37 42 chr10 119611306 119611496 -20705269 + MER5A DNA MER1_type 1 189 0 24 0 0 0 chr10 119613274 119613298 -20703467 + AT_rich Low_complexity Low_complexity 1 24 0 364 189 57 38 chr10 119613618 119613724 -20703041 - L1ME3A LINE L1 -9 6161 6054 28 48 0 0 chr10 119613824 119613866 -20702899 + AT_rich Low_complexity Low_complexity 1 42 0 1130 279 75 16 chr10 119614542 119614926 -20701839 - L1M3a LINE L1 -5520 435 29 2619 229 163 80 chr10 119614998 119616922 -20699843 - HAL1 LINE L1 -305 2202 118 21 0 0 0 chr10 119616936 119616957 -20699808 + AT_rich Low_complexity Low_complexity 1 21 0 1817 172 10 0 chr10 119616959 119617255 -20699510 + AluJb SINE Alu 1 299 -13 251 308 84 14 chr10 119617758 119617901 -20698864 - MIR SINE MIR -71 191 39 247 303 168 8 chr10 119618182 119618301 -20698464 + L2 LINE L2 3172 3309 -4 1744 146 11 0 chr10 119620183 119620492 -20696273 + AluSx SINE Alu 1 312 0 1253 105 0 0 chr10 119620928 119621100 -20695665 - AluY SINE Alu -11 300 129 2383 65 7 3 chr10 119621201 119621511 -20695254 - AluY SINE Alu 0 311 1 430 258 73 16 chr10 119621796 119621920 -20694845 - MIR SINE MIR -50 212 82 1908 126 3 16 chr10 119622161 119622470 -20694295 + AluSx SINE Alu 1 305 -7 889 153 93 0 chr10 119623190 119623340 -20693425 + FRAM SINE Alu 1 164 -2 225 0 0 0 chr10 119623885 119623910 -20692855 + (T)n Simple_repeat Simple_repeat 1 25 0 221 279 49 0 chr10 119624528 119624589 -20692176 - L2 LINE L2 -1 3271 3208 271 305 47 23 chr10 119626502 119626630 -20690135 - MIR SINE MIR -90 172 42 2902 167 47 0 chr10 119626821 119627313 -20689452 - MER72 LTR ERV1 0 722 208 1199 211 65 4 chr10 119627313 119627574 -20689191 + AluJo SINE Alu 1 277 -35 942 186 13 66 chr10 119627578 119627641 -20689124 - MER72 LTR ERV1 -500 222 157 1443 181 10 42 chr10 119627641 119627950 -20688815 + AluJo SINE Alu 1 299 -13 942 186 13 66 chr10 119627950 119628041 -20688724 - MER72 LTR ERV1 -565 157 81 1626 109 4 0 chr10 119628041 119628271 -20688494 + AluSq SINE Alu 58 288 -25 942 186 13 66 chr10 119628271 119628341 -20688424 - MER72 LTR ERV1 -641 81 9 894 181 148 26 chr10 119628953 119629041 -20687724 + MER33 DNA MER1_type 21 97 -2488 2383 99 0 0 chr10 119629041 119629353 -20687412 + AluSx SINE Alu 1 312 0 894 181 148 26 chr10 119629353 119629535 -20687230 + MER33 DNA MER1_type 97 324 0 336 314 8 0 chr10 119629901 119630025 -20686740 + L1ME4a LINE L1 5557 5681 -440 369 226 52 32 chr10 119630174 119630329 -20686436 + L1ME4a LINE L1 5941 6098 -23 196 340 0 0 chr10 119630377 119630430 -20686335 - MIR SINE MIR -4 258 206 247 167 50 17 chr10 119632391 119632451 -20684314 - MIR3 SINE MIR -33 175 114 2538 166 44 2 chr10 119632451 119632909 -20683856 - L1MC1 LINE L1 -19 6314 5838 269 309 10 62 chr10 119633001 119633098 -20683667 + L2 LINE L2 3180 3271 -1 233 314 33 58 chr10 119633606 119633727 -20683038 - MIR SINE MIR -55 207 90 316 268 85 46 chr10 119634046 119634199 -20682566 + MIR SINE MIR 47 205 -57 404 248 157 62 chr10 119634220 119634430 -20682335 - MIR SINE MIR -12 250 21 552 233 69 63 chr10 119635793 119635982 -20680783 + MIR SINE MIR 66 255 -7 215 302 142 9 chr10 119636692 119636798 -20679967 - MIR SINE MIR -14 248 129 2291 85 0 13 chr10 119637600 119637907 -20678858 + AluSq SINE Alu 1 303 -10 1524 115 0 5 chr10 119638755 119638973 -20677792 - AluSq SINE Alu -89 224 8 1130 122 0 6 chr10 119639341 119639505 -20677260 + AluSg/x SINE Alu 134 296 -14 336 281 21 10 chr10 119639692 119639788 -20676977 - MIR SINE MIR -75 133 37 783 286 68 84 chr10 119640209 119640385 -20676380 + L2 LINE L2 2507 2684 -588 3116 70 11 62 chr10 119640385 119640636 -20676129 - L1PA10 LINE L1 -2 6166 5949 2071 123 3 0 chr10 119640636 119640937 -20675828 - AluSx SINE Alu -10 302 1 3116 70 11 62 chr10 119640937 119641154 -20675611 - L1PA10 LINE L1 -219 5949 5722 783 286 68 84 chr10 119641154 119641697 -20675068 + L2 LINE L2 2684 3270 -2 525 222 37 2 chr10 119642294 119642438 -20674327 - MIR3 SINE MIR -67 141 5 232 294 0 0 chr10 119642462 119642513 -20674252 + MIR3 SINE MIR 110 160 -48 183 221 73 73 chr10 119642514 119642582 -20674183 + MER5B DNA MER1_type 2 69 -109 1756 108 65 0 chr10 119643202 119643481 -20673284 - AluSx SINE Alu -9 303 7 1630 101 0 0 chr10 119644063 119644280 -20672485 - AluSq SINE Alu -96 217 1 362 190 33 8 chr10 119644565 119644686 -20672079 + C-rich Low_complexity Low_complexity 2 125 0 1064 108 0 0 chr10 119645290 119645438 -20671327 + AluSq SINE Alu 150 297 -16 1906 156 0 3 chr10 119645452 119645753 -20671012 - AluJb SINE Alu -12 300 1 720 288 93 53 chr10 119646457 119646874 -20669891 - MLT1K LTR MaLR -7 581 148 1491 309 53 19 chr10 119647164 119647789 -20668976 + L1MC4 LINE L1 5304 5949 -1859 2231 89 0 7 chr10 119648010 119648314 -20668451 + AluSc SINE Alu 1 302 -7 395 288 88 19 chr10 119648841 119649001 -20667764 - MIR3 SINE MIR -30 178 8 224 277 180 25 chr10 119649175 119649538 -20667227 + L3 LINE CR1 1057 1534 -43 597 272 123 25 chr10 119650136 119651044 -20665721 - L1MC4a LINE L1 -395 5726 4971 248 315 154 14 chr10 119652105 119652248 -20664517 + MIR SINE MIR 89 251 -11 304 258 81 48 chr10 119652965 119653089 -20663676 + MIR SINE MIR 23 150 -58 2476 123 72 10 chr10 119653161 119653561 -20663204 - MSTB LTR MaLR 0 426 2 211 256 45 23 chr10 119653571 119653704 -20663061 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 310 322 58 0 chr10 119653704 119653791 -20662974 + L1MC4 LINE L1 6612 6703 -1339 1746 159 3 0 chr10 119654406 119654696 -20662069 - AluJb SINE Alu -21 291 1 2344 78 0 3 chr10 119654710 119655018 -20661747 - AluY SINE Alu -4 307 1 730 170 19 6 chr10 119655078 119655237 -20661528 - L1MB7 LINE L1 0 6184 6024 4019 173 51 27 chr10 119655237 119655800 -20660965 + L1MB7 LINE L1 5338 5886 -298 2184 93 0 7 chr10 119655800 119656100 -20660665 - AluY SINE Alu -13 298 1 2222 101 0 0 chr10 119656103 119656401 -20660364 - AluSx SINE Alu -14 298 1 4019 173 51 27 chr10 119656401 119656660 -20660105 + L1MB7 LINE L1 5887 6184 0 306 250 21 73 chr10 119656827 119656923 -20659842 - MIR3 SINE MIR -31 177 87 2486 44 0 0 chr10 119657397 119657693 -20659072 + AluY SINE Alu 1 296 -15 772 136 0 0 chr10 119657693 119657811 -20658954 - L1MA2 LINE L1 -2 6302 6185 228 192 71 81 chr10 119658379 119658478 -20658287 - L1MB7 LINE L1 -458 5784 5687 2344 75 0 7 chr10 119658488 119658793 -20657972 - AluSq SINE Alu -5 308 6 1964 105 3 34 chr10 119658827 119659123 -20657642 - AluSx SINE Alu -25 287 1 318 397 16 0 chr10 119659210 119659336 -20657429 + MER5A DNA MER1_type 55 182 -7 338 301 159 6 chr10 119659429 119659592 -20657173 - MIR SINE MIR -73 189 2 344 330 127 24 chr10 119659745 119659957 -20656808 + MIR SINE MIR 29 262 0 2292 64 0 55 chr10 119660064 119660393 -20656372 - AluY SINE Alu 0 311 1 2159 113 0 0 chr10 119660680 119660982 -20655783 + AluSx SINE Alu 1 302 -10 282 183 84 14 chr10 119661351 119661422 -20655343 - MER58A DNA MER1_type 0 224 149 415 178 55 0 chr10 119661424 119661497 -20655268 - MER58A DNA MER1_type 0 108 32 341 276 191 89 chr10 119661618 119661843 -20654922 + MIR SINE MIR 15 262 0 288 269 106 10 chr10 119661857 119661961 -20654804 + MIR SINE MIR 123 236 -26 653 225 139 12 chr10 119662765 119662938 -20653827 + MLT1J2 LTR MaLR 137 331 -119 315 0 0 0 chr10 119662990 119663025 -20653740 + (CA)n Simple_repeat Simple_repeat 2 36 0 275 257 126 46 chr10 119664530 119664705 -20652060 - MLT1K LTR MaLR -22 566 378 1290 272 94 44 chr10 119665132 119665854 -20650911 - L2 LINE L2 -40 3273 2454 1786 125 6 62 chr10 119665854 119666175 -20650590 - AluSx SINE Alu -8 304 2 1290 272 94 44 chr10 119666175 119666634 -20650131 - L2 LINE L2 -859 2454 2019 181 257 54 122 chr10 119666704 119666852 -20649913 + L2 LINE L2 3163 3300 -13 554 208 171 59 chr10 119666929 119667027 -20649738 - MER5C DNA MER1_type 0 324 238 1961 141 0 0 chr10 119667027 119667325 -20649440 + AluSx SINE Alu 1 298 -14 554 208 171 59 chr10 119667325 119667516 -20649249 - MER5C DNA MER1_type -86 238 5 580 253 79 17 chr10 119667644 119667822 -20648943 + MER5A DNA MER1_type 1 189 0 1747 134 3 67 chr10 119667886 119668200 -20648565 - AluJb SINE Alu -18 294 1 191 259 17 17 chr10 119668231 119668289 -20648476 + MER5B DNA MER1_type 6 63 -115 2189 114 7 0 chr10 119668553 119668859 -20647906 - AluSx SINE Alu 0 312 5 215 293 217 0 chr10 119671080 119671186 -20645579 - L2 LINE L2 0 3272 3144 207 282 13 39 chr10 119671461 119671539 -20645226 + MIR SINE MIR 123 198 -64 628 344 24 36 chr10 119671596 119671930 -20644835 - L2 LINE L2 0 3313 2984 1652 177 23 7 chr10 119672116 119672416 -20644349 - AluJo SINE Alu -7 305 1 261 331 33 25 chr10 119672761 119672882 -20643883 + MIR SINE MIR 32 153 -109 227 270 16 0 chr10 119673187 119673250 -20643515 - MIR SINE MIR -64 144 81 1975 122 21 0 chr10 119673399 119673685 -20643080 - AluSx SINE Alu -20 292 1 474 331 0 0 chr10 119674618 119674787 -20641978 + (CAGG)n Simple_repeat Simple_repeat 4 172 0 658 278 33 1 chr10 119674928 119675143 -20641622 + MIR SINE MIR 29 248 -14 481 324 85 0 chr10 119675658 119675834 -20640931 - MIR SINE MIR -45 217 27 369 271 47 0 chr10 119676735 119676842 -20639923 + MIR SINE MIR 134 245 -17 542 287 41 33 chr10 119676842 119677086 -20639679 + L1M4 LINE L1 4893 5138 -1008 323 246 101 65 chr10 119678045 119678183 -20638582 + MIR SINE MIR 120 262 0 220 237 68 0 chr10 119678298 119678357 -20638408 + (CATG)n Simple_repeat Simple_repeat 3 65 0 395 225 0 11 chr10 119678366 119678455 -20638310 + MER112 DNA MER1_type 78 165 -95 1971 128 0 0 chr10 119678565 119678847 -20637918 - AluJo SINE Alu -15 297 16 1355 154 90 10 chr10 119679069 119679368 -20637397 - L1MC3 LINE L1 0 7785 7463 332 251 55 68 chr10 119679372 119679535 -20637230 + L2 LINE L2 2689 2849 -465 306 295 28 83 chr10 119679549 119679803 -20636962 + L2 LINE L2 2986 3225 -47 452 237 199 13 chr10 119679852 119680122 -20636643 - MLT1J LTR MaLR -38 473 102 183 196 0 87 chr10 119680965 119681011 -20635754 - L2 LINE L2 -18 3254 3213 894 93 0 0 chr10 119681274 119681392 -20635373 + AluSp/q SINE Alu 184 301 -12 691 282 20 20 chr10 119681862 119682057 -20634708 - L2 LINE L2 0 3313 3119 617 250 206 3 chr10 119682063 119682359 -20634406 - L2 LINE L2 -1758 1556 1201 2059 122 3 0 chr10 119683377 119683672 -20633093 + AluSq SINE Alu 1 296 -17 2099 117 0 3 chr10 119684090 119684388 -20632377 - AluSq SINE Alu -16 297 1 319 296 170 0 chr10 119685097 119685303 -20631462 - L1M4 LINE L1 -1838 4308 4068 295 270 122 39 chr10 119685334 119685671 -20631094 - L1M4 LINE L1 -2146 4000 3636 332 294 170 36 chr10 119685685 119686060 -20630705 - L1M4 LINE L1 -2763 3383 2826 22 0 0 0 chr10 119686396 119686418 -20630347 + AT_rich Low_complexity Low_complexity 1 22 0 194 338 27 0 chr10 119687926 119688000 -20628765 + MIR SINE MIR 64 139 -69 2179 100 7 0 chr10 119689477 119689768 -20626997 + AluSx SINE Alu 1 293 -19 704 118 17 50 chr10 119689945 119690064 -20626701 + FLAM_C SINE Alu 2 116 -17 22 35 0 0 chr10 119690064 119690093 -20626672 + AT_rich Low_complexity Low_complexity 1 29 0 251 216 19 147 chr10 119690861 119690978 -20625787 + MIR3 SINE MIR 43 149 -59 2336 203 50 64 chr10 119690978 119691540 -20625225 + MLT2B3 LTR ERVL 1 554 0 369 280 76 0 chr10 119692216 119692348 -20624417 + MIR SINE MIR 56 197 -65 194 240 27 53 chr10 119693175 119693250 -20623515 - MIR SINE MIR -70 192 120 2085 122 3 0 chr10 119694692 119694988 -20621777 - AluSx SINE Alu -15 297 1 279 318 106 0 chr10 119695035 119695186 -20621579 + L2 LINE L2 2578 2744 -570 196 349 60 0 chr10 119695334 119695417 -20621348 + L2 LINE L2 3142 3229 -43 290 360 11 11 chr10 119696410 119696588 -20620177 + G-rich Low_complexity Low_complexity 2 179 0 348 377 5 0 chr10 119696611 119697134 -20619631 + G-rich Low_complexity Low_complexity 1 525 0 324 358 13 8 chr10 119697147 119697439 -20619326 + G-rich Low_complexity Low_complexity 1 293 0 281 333 0 0 chr10 119697505 119697619 -20619146 + G-rich Low_complexity Low_complexity 3 116 0 265 336 0 16 chr10 119697632 119697757 -20619008 + G-rich Low_complexity Low_complexity 4 126 0 200 336 259 0 chr10 119698939 119699082 -20617683 + L3b LINE CR1 1278 1457 -126 201 256 0 0 chr10 119699405 119699444 -20617321 + (CA)n Simple_repeat Simple_repeat 2 40 0 214 234 64 43 chr10 119700329 119700423 -20616342 + MIR SINE MIR 96 191 -71 2141 104 3 3 chr10 119701301 119701609 -20615156 - AluSx SINE Alu -4 308 1 432 0 0 0 chr10 119703616 119703664 -20613101 + (TG)n Simple_repeat Simple_repeat 2 49 0 261 336 43 0 chr10 119703668 119703784 -20612981 + (CATG)n Simple_repeat Simple_repeat 2 122 0 * 301 351 0 9 chr10 119703698 119703809 -20612956 + (TG)n Simple_repeat Simple_repeat 1 110 0 225 330 58 10 chr10 119703817 119703920 -20612845 + MIR SINE MIR 31 138 -70 * 239 289 16 15 chr10 119703918 119704054 -20612711 - MIR SINE MIR -2 260 36 271 351 35 29 chr10 119704756 119704930 -20611835 + MIR SINE MIR 24 198 -64 186 264 256 8 chr10 119705931 119706052 -20610713 + MIR SINE MIR 111 261 -1 2279 94 0 0 chr10 119706242 119706551 -20610214 + AluSg SINE Alu 1 309 -1 260 285 23 69 chr10 119707459 119707589 -20609176 + MIR3 SINE MIR 71 194 -14 265 279 0 0 chr10 119708096 119708164 -20608601 + (TCCA)n Simple_repeat Simple_repeat 2 69 0 371 315 169 12 chr10 119708184 119708438 -20608327 - L3 LINE CR1 -25 1552 1259 445 272 79 40 chr10 119708751 119708953 -20607812 + L1ME LINE L1 5472 5663 -458 1825 152 7 3 chr10 119708958 119709247 -20607518 + AluJb SINE Alu 1 290 -22 2108 115 6 13 chr10 119709838 119710150 -20606615 + AluSx SINE Alu 1 310 -2 2036 148 0 0 chr10 119710253 119710556 -20606209 + AluSx SINE Alu 1 303 -9 583 278 182 21 chr10 119711195 119711537 -20605228 + MLT1J2 LTR MaLR 76 439 -11 2611 89 59 7 chr10 119712513 119712918 -20603847 - L1PB2 LINE L1 -2 6149 5724 840 283 124 16 chr10 119713250 119713285 -20603480 + L2 LINE L2 2677 2707 -606 2793 75 19 6 chr10 119713285 119713644 -20603121 + THE1B LTR MaLR 1 364 0 840 283 124 16 chr10 119713644 119714093 -20602672 + L2 LINE L2 2707 3226 -87 238 278 0 0 chr10 119714847 119714901 -20601864 + MIR SINE MIR 92 145 -117 1874 135 3 26 chr10 119715626 119715929 -20600836 - AluSx SINE Alu -13 299 4 454 307 120 0 chr10 119716455 119716647 -20600118 + MIR SINE MIR 26 240 -22 2443 159 35 7 chr10 119717572 119717994 -20598771 + LTR23 LTR ERV1 4 437 0 432 272 56 91 chr10 119718006 119718193 -20598572 + MIR SINE MIR 1 188 -74 300 27 0 0 chr10 119718519 119718556 -20598209 + (TA)n Simple_repeat Simple_repeat 1 37 0 1867 116 47 4 chr10 119718556 119718814 -20597951 - AluSx SINE Alu -22 290 22 742 233 22 56 chr10 119718940 119719172 -20597593 - MER58A DNA MER1_type 0 224 1 343 229 92 38 chr10 119721209 119721340 -20595425 + MIR SINE MIR 47 184 -78 294 213 49 0 chr10 119721811 119721872 -20594893 + MIR SINE MIR 47 110 -152 325 329 80 0 chr10 119721950 119722087 -20594678 - MIR SINE MIR -66 196 49 372 271 75 15 chr10 119722107 119722240 -20594525 - L2 LINE L2 -1 3312 3172 284 252 212 62 chr10 119722378 119722604 -20594161 - L2 LINE L2 -354 2960 2701 1036 184 0 0 chr10 119722683 119722841 -20593924 - FAM SINE Alu -17 158 1 2070 108 29 0 chr10 119724944 119725221 -20591544 + AluSx SINE Alu 27 311 -1 248 295 102 8 chr10 119726193 119726311 -20590454 + MIR SINE MIR 35 166 -70 293 320 79 48 chr10 119726508 119726712 -20590053 + L1MC4a LINE L1 5532 5753 -2055 2529 67 0 3 chr10 119726712 119727010 -20589755 + AluY SINE Alu 1 297 -14 293 320 79 48 chr10 119727010 119727161 -20589604 + L1MC4a LINE L1 5753 5898 -1910 450 297 86 8 chr10 119727726 119727854 -20588911 - L2 LINE L2 -2 3270 3133 220 204 0 20 chr10 119728070 119728119 -20588646 + G-rich Low_complexity Low_complexity 1 48 0 415 280 164 27 chr10 119728653 119728883 -20587882 + MIR SINE MIR 4 262 0 1224 197 92 0 chr10 119729936 119730220 -20586545 + L1ME2 LINE L1 5644 5953 -211 246 56 28 0 chr10 119730262 119730298 -20586467 + MER3 DNA MER1_type 13 49 -160 297 240 90 0 chr10 119730298 119730398 -20586367 + L1ME2 LINE L1 6055 6163 -1 409 287 112 12 chr10 119730400 119730572 -20586193 + MIR SINE MIR 18 203 -59 2332 46 42 3 chr10 119730673 119730958 -20585807 + AluY SINE Alu 1 296 -15 1720 151 14 115 chr10 119731049 119731228 -20585537 + MLT1B LTR MaLR 1 196 -194 2310 99 10 0 chr10 119731228 119731522 -20585243 + AluSx SINE Alu 1 297 -15 1720 151 14 115 chr10 119731522 119731545 -20585220 + MLT1B LTR MaLR 196 220 -170 1630 123 87 47 chr10 119731545 119731822 -20584943 + AluJb SINE Alu 1 288 -24 1720 151 14 115 chr10 119731822 119732035 -20584730 + MLT1B LTR MaLR 220 375 -15 225 327 0 0 chr10 119732696 119732751 -20584014 + L3b LINE CR1 1528 1582 -1 2459 93 0 3 chr10 119732828 119733138 -20583627 + AluSc SINE Alu 1 309 0 1474 170 14 31 chr10 119733312 119733600 -20583165 - MER50 LTR ERV1 -19 715 433 1246 147 39 30 chr10 119733588 119733820 -20582945 - MER50 LTR ERV1 -500 234 1 * 1858 194 179 2 chr10 119733905 119734334 -20582431 + MLT1D LTR MaLR 1 505 0 268 224 280 28 chr10 119734368 119734475 -20582290 + L2 LINE L2 3180 3313 0 197 236 36 18 chr10 119735796 119735851 -20580914 - L2 LINE L2 -2657 657 602 2422 106 0 0 chr10 119736312 119736624 -20580141 + AluSx SINE Alu 1 312 0 1467 171 39 105 chr10 119738961 119739294 -20577471 - AluJo SINE Alu -1 311 1 1611 207 85 6 chr10 119739300 119739704 -20577061 - L1MB4 LINE L1 0 6180 5746 350 296 130 6 chr10 119739726 119739888 -20576877 - L1ME1 LINE L1 -2 6164 5983 472 219 34 17 chr10 119739905 119740024 -20576741 - L1ME1 LINE L1 -267 5899 5779 786 207 41 0 chr10 119740200 119740369 -20576396 - MER5B DNA MER1_type 0 178 3 2054 133 3 17 chr10 119740591 119740893 -20575872 + AluSq SINE Alu 1 298 -15 785 146 46 23 chr10 119740994 119741124 -20575641 + FLAM_A SINE Alu 1 133 0 233 324 35 55 chr10 119741891 119742036 -20574729 + L2 LINE L2 3122 3263 -9 579 249 24 41 chr10 119743440 119743609 -20573156 + MIR SINE MIR 48 213 -49 2270 107 0 7 chr10 119743741 119744051 -20572714 + AluSx SINE Alu 1 308 -4 1338 260 125 21 chr10 119744458 119744969 -20571796 + MLT1K LTR MaLR 2 565 -23 222 248 144 28 chr10 119745044 119745163 -20571602 - MIR SINE MIR -85 123 31 569 292 120 28 chr10 119746170 119746461 -20570304 + MLT1K LTR MaLR 254 571 -17 941 92 156 0 chr10 119746808 119746949 -20569816 - AluSg/x SINE Alu -14 298 136 244 268 8 166 chr10 119747023 119747113 -20569652 - MER112 DNA MER1_type -6 254 151 319 102 20 0 chr10 119747113 119747162 -20569603 + L1MC1 LINE L1 6275 6324 -9 244 268 8 166 chr10 119747162 119747243 -20569522 - MER112 DNA MER1_type -109 151 137 1924 157 0 3 chr10 119747243 119747530 -20569235 + AluJb SINE Alu 3 288 -24 244 268 8 166 chr10 119747530 119747622 -20569143 - MER112 DNA MER1_type -123 137 32 802 267 108 0 chr10 119747674 119747925 -20568840 - MER46C DNA MER2_type -15 323 46 472 164 58 72 chr10 119747949 119748156 -20568609 + Charlie5 DNA MER1_type 2421 2624 0 387 218 122 27 chr10 119749921 119750068 -20566697 - MIR SINE MIR -67 195 35 219 114 0 0 chr10 119750119 119750154 -20566611 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2448 95 0 0 chr10 119750184 119750488 -20566277 + AluSq SINE Alu 1 304 -9 2101 214 22 63 chr10 119751539 119752037 -20564728 + MLT2B1 LTR ERVL 1 477 -43 762 60 0 0 chr10 119752037 119752137 -20564628 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 2101 214 22 63 chr10 119752137 119752180 -20564585 + MLT2B1 LTR ERVL 477 520 0 2119 104 87 38 chr10 119752464 119752811 -20563954 - THE1B LTR MaLR 0 364 1 232 324 176 0 chr10 119753270 119753372 -20563393 - L2 LINE L2 0 3313 3194 412 303 101 25 chr10 119753586 119753784 -20562981 + MIR SINE MIR 48 260 -2 1227 240 55 46 chr10 119753794 119754252 -20562513 + MLT1C LTR MaLR 6 467 0 370 305 119 35 chr10 119755018 119755244 -20561521 - MIR SINE MIR -6 256 12 635 192 77 32 chr10 119755355 119755511 -20561254 - MIR SINE MIR -53 209 47 1553 218 61 30 chr10 119755822 119756263 -20560502 - MLT1C LTR MaLR -12 455 1 27 62 0 0 chr10 119756972 119757020 -20559745 + AT_rich Low_complexity Low_complexity 1 48 0 1901 157 0 32 chr10 119757274 119757586 -20559179 - AluJo SINE Alu -10 302 1 2274 95 3 10 chr10 119758236 119758541 -20558224 + AluSg SINE Alu 1 303 -7 2645 137 79 54 chr10 119759572 119759967 -20556798 + L1MA9 LINE L1 5699 6083 -229 1807 156 18 0 chr10 119759967 119760265 -20556500 - AluJb SINE Alu 0 303 1 2645 137 79 54 chr10 119760265 119760318 -20556447 + L1MA9 LINE L1 6083 6133 -179 387 0 0 0 chr10 119760318 119760361 -20556404 + (CA)n Simple_repeat Simple_repeat 2 44 0 2645 137 79 54 chr10 119760361 119760503 -20556262 + L1MA9 LINE L1 6133 6307 -5 688 190 7 36 chr10 119760719 119760856 -20555909 + AluJo/FLAM SINE Alu 1 133 -169 2668 33 0 0 chr10 119760858 119761160 -20555605 + AluY SINE Alu 1 302 -9 241 288 105 21 chr10 119761161 119761352 -20555413 - L1MC5 LINE L1 -36 7925 7719 229 309 109 61 chr10 119761519 119761684 -20555081 + MIR3 SINE MIR 36 208 0 203 352 67 48 chr10 119762398 119762503 -20554262 + L2 LINE L2 2948 3054 -218 2139 62 4 4 chr10 119763089 119763365 -20553400 + L1PA7 LINE L1 5877 6152 -2 311 278 22 11 chr10 119764157 119764247 -20552518 - L1MC3 LINE L1 -1135 6650 6560 315 267 118 15 chr10 119764406 119764541 -20552224 - L1MC3 LINE L1 -1880 5928 5780 1180 180 10 5 chr10 119764589 119764789 -20551976 + AluJb SINE Alu 85 285 -27 2104 123 3 0 chr10 119764889 119765173 -20551592 + AluSx SINE Alu 1 285 -27 206 31 0 31 chr10 119765187 119765219 -20551546 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 181 250 42 21 chr10 119765527 119765575 -20551190 - L2 LINE L2 -65 3248 3200 207 211 0 35 chr10 119766358 119766415 -20550350 + GA-rich Low_complexity Low_complexity 4 58 0 1474 215 46 6 chr10 119766580 119766906 -20549859 + MER58B DNA MER1_type 1 339 -2 1234 179 26 18 chr10 119766915 119767188 -20549577 - MER58D DNA MER1_type -55 331 57 1767 163 54 7 chr10 119767237 119767532 -20549233 + AluJo SINE Alu 1 309 -3 182 246 14 145 chr10 119767791 119767929 -20548836 - L2 LINE L2 -12 3301 3182 21 0 0 0 chr10 119769191 119769212 -20547553 + AT_rich Low_complexity Low_complexity 1 21 0 2114 136 3 7 chr10 119770478 119770780 -20545985 + AluSx SINE Alu 4 304 -8 21 0 0 0 chr10 119770999 119771020 -20545745 + AT_rich Low_complexity Low_complexity 1 21 0 290 274 29 20 chr10 119771891 119771993 -20544772 + MIR SINE MIR 110 212 -50 710 299 142 46 chr10 119772153 119772423 -20544342 + L1MC/D LINE L1 4737 4980 -1166 3062 159 8 80 chr10 119772423 119773126 -20543639 + L1MB7 LINE L1 5532 6184 0 710 299 142 46 chr10 119773126 119773314 -20543451 + L1MC/D LINE L1 4980 5239 -907 1033 294 43 39 chr10 119773324 119773817 -20542948 + L1MC/D LINE L1 5255 5749 -2059 1656 185 7 52 chr10 119773923 119774133 -20542632 + L1MA4A LINE L1 5916 6101 -202 2320 108 3 7 chr10 119774133 119774438 -20542327 - AluSp SINE Alu -8 305 2 1656 185 7 52 chr10 119774438 119774633 -20542132 + L1MA4A LINE L1 6101 6303 0 355 298 32 8 chr10 119774836 119774960 -20541805 + GA-rich Low_complexity Low_complexity 1 127 0 22 0 0 0 chr10 119775202 119775224 -20541541 + AT_rich Low_complexity Low_complexity 1 22 0 1084 170 0 0 chr10 119777800 119777965 -20538800 + FRAM SINE Alu 2 166 0 21 0 0 0 chr10 119777983 119778004 -20538761 + AT_rich Low_complexity Low_complexity 1 21 0 311 302 81 13 chr10 119779080 119779229 -20537536 - MIR SINE MIR -20 242 84 795 287 98 44 chr10 119779769 119780226 -20536539 + L2 LINE L2 2828 3309 -4 184 337 33 43 chr10 119781056 119781148 -20535617 - L2 LINE L2 -1 3271 3181 441 336 110 32 chr10 119781708 119781985 -20534780 - L1ME2 LINE L1 -282 5882 5628 2455 76 3 3 chr10 119781985 119782287 -20534478 + AluSg SINE Alu 1 302 -8 441 336 110 32 chr10 119782287 119782589 -20534176 - L1ME2 LINE L1 -536 5628 5259 262 304 181 76 chr10 119782724 119782751 -20534014 - L2 LINE L2 -11 3261 3238 2298 132 0 0 chr10 119782751 119783062 -20533703 - AluSx SINE Alu -1 311 1 262 304 181 76 chr10 119783062 119783442 -20533323 - L2 LINE L2 -34 3238 2811 1843 164 7 13 chr10 119783650 119783955 -20532810 + AluJo SINE Alu 5 307 -5 212 139 0 23 chr10 119786154 119786197 -20530568 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 1231 166 43 50 chr10 119788640 119788942 -20527823 - L1ME1 LINE L1 -5 6161 5862 576 234 9 0 chr10 119789100 119789211 -20527554 + MER81 DNA DNA 1 112 -2 582 224 49 60 chr10 119790123 119790306 -20526459 - MIR3 SINE MIR -27 181 1 360 249 54 160 chr10 119790621 119790934 -20525831 - L2 LINE L2 -1 3271 2992 247 309 0 12 chr10 119791098 119791182 -20525583 + MIR SINE MIR 99 181 -81 265 222 19 0 chr10 119791491 119791545 -20525220 - MIR SINE MIR -64 144 90 935 186 17 0 chr10 119792259 119792431 -20524334 + MER5B DNA MER1_type 4 178 0 29 28 0 0 chr10 119796254 119796290 -20520475 + GC_rich Low_complexity Low_complexity 1 36 0 618 294 69 18 chr10 119797166 119797303 -20519462 - MIR SINE MIR -2 260 107 2176 102 3 3 chr10 119797303 119797596 -20519169 + AluSg SINE Alu 1 293 -17 618 294 69 18 chr10 119797596 119797676 -20519089 - MIR SINE MIR -155 107 32 574 180 0 0 chr10 119797682 119797782 -20518983 - AluJ SINE Alu -10 302 203 4948 114 12 1 chr10 119797785 119798540 -20518225 + L1PA15 LINE L1 5402 6164 -1 30 0 0 0 chr10 119798553 119798583 -20518182 + AT_rich Low_complexity Low_complexity 1 30 0 2219 113 10 3 chr10 119798626 119798935 -20517830 + AluSx SINE Alu 1 311 -1 808 234 46 15 chr10 119798984 119799181 -20517584 - AluJb SINE Alu -98 214 12 184 280 121 81 chr10 119799249 119799581 -20517184 - L2 LINE L2 -102 3170 2826 182 282 91 27 chr10 119799888 119799998 -20516767 - L2 LINE L2 -30 3283 3167 307 300 86 11 chr10 119800579 119800704 -20516061 - MIR SINE MIR -67 141 15 343 264 179 0 chr10 119801566 119801672 -20515093 - MIR SINE MIR -54 208 84 306 262 16 0 chr10 119801959 119802020 -20514745 + L2 LINE L2 3211 3272 0 238 167 0 67 chr10 119802156 119802216 -20514549 - L2 LINE L2 -212 3060 3005 4446 118 23 3 chr10 119802232 119802918 -20513847 - L1MB4 LINE L1 0 6180 5481 234 152 0 65 chr10 119803061 119803107 -20513658 - MIR3 SINE MIR -53 155 113 186 298 95 51 chr10 119803629 119803787 -20512978 - MIR3 SINE MIR -2 206 42 190 209 66 99 chr10 119804347 119804438 -20512327 - MIR3 SINE MIR -14 194 107 195 228 198 40 chr10 119805292 119805393 -20511372 + L2 LINE L2 1966 2082 -1232 6217 28 3 1 chr10 119805470 119806225 -20510540 - L1PA3 LINE L1 0 6155 5436 7343 19 1 0 chr10 119806225 119807142 -20509623 + L1P LINE L1 4511 5428 -727 259 296 43 17 chr10 119807468 119807583 -20509182 - MIR SINE MIR -60 148 31 806 193 61 48 chr10 119807786 119807886 -20508879 + MER106A DNA MER1_type 4 101 -135 333 47 0 0 chr10 119807886 119807929 -20508836 + (GA)n Simple_repeat Simple_repeat 2 44 0 806 193 61 48 chr10 119807929 119808056 -20508709 + MER106A DNA MER1_type 101 234 -2 743 284 68 0 chr10 119808056 119808278 -20508487 + MIR SINE MIR 20 256 -6 1795 191 7 3 chr10 119808594 119808898 -20507867 - AluJo SINE Alu -7 305 1 505 289 173 0 chr10 119808938 119809094 -20507671 - MER5A DNA MER1_type 0 189 7 200 214 18 0 chr10 119809395 119809451 -20507314 + GA-rich Low_complexity Low_complexity 1 57 0 225 215 38 89 chr10 119809773 119809852 -20506913 - L2 LINE L2 -2926 388 314 1831 158 90 11 chr10 119809909 119810276 -20506489 + MSTD LTR MaLR 1 396 0 250 357 99 24 chr10 119810489 119810702 -20506063 + MIR SINE MIR 27 255 -7 2116 133 0 31 chr10 119810789 119811111 -20505654 - AluJb SINE Alu 0 312 1 2640 52 0 3 chr10 119811591 119811898 -20504867 + AluY SINE Alu 1 306 -5 2559 181 11 49 chr10 119811924 119812476 -20504289 - L1MB8 LINE L1 0 6178 5648 213 290 65 51 chr10 119812541 119812679 -20504086 + L2 LINE L2 2353 2492 -822 188 292 21 0 chr10 119812820 119812868 -20503897 + L2 LINE L2 3223 3271 -42 344 248 38 25 chr10 119812985 119813010 -20503755 - L1MA10 LINE L1 0 6334 6310 783 188 43 12 chr10 119813010 119813260 -20503505 - L1ME1 LINE L1 -15 6151 5811 1024 237 26 19 chr10 119813361 119813841 -20502924 - L1ME1 LINE L1 -498 5666 4981 265 256 35 0 chr10 119813944 119814030 -20502735 + MER96 DNA MER1_type? 84 172 -3 2375 95 20 0 chr10 119814318 119814622 -20502143 - AluSx SINE Alu -2 310 1 1886 194 3 0 chr10 119815252 119815562 -20501203 - 7SLRNA srpRNA srpRNA -9 311 1 2247 117 0 0 chr10 119815600 119815890 -20500875 - AluSx SINE Alu -18 294 5 1402 132 33 0 chr10 119816225 119816467 -20500298 - L1MA8 LINE L1 -4 6287 6038 299 191 66 24 chr10 119816475 119816495 -20500270 - MLT1C LTR MaLR -342 125 107 2635 138 68 6 chr10 119816495 119816966 -20499799 - L1PA16 LINE L1 0 6166 5667 299 191 66 24 chr10 119816966 119817056 -20499709 - MLT1C LTR MaLR -360 107 1 277 264 9 104 chr10 119817710 119817816 -20498949 + MER5B DNA MER1_type 5 100 -78 227 329 14 0 chr10 119818461 119818531 -20498234 + MIR SINE MIR 182 252 -10 1104 94 0 20 chr10 119819596 119819745 -20497020 - AluY SINE Alu -122 189 44 2404 62 34 0 chr10 119819904 119820196 -20496569 - AluY SINE Alu -9 302 1 693 309 28 0 chr10 119820253 119820431 -20496334 - MIR SINE MIR -77 185 3 307 286 48 9 chr10 119820730 119820835 -20495930 - MIR SINE MIR -85 177 69 325 263 96 32 chr10 119821006 119821162 -20495603 + MIR SINE MIR 16 181 -81 314 264 186 36 chr10 119823959 119824152 -20492613 - MIR SINE MIR -25 237 16 192 255 226 28 chr10 119825320 119825426 -20491339 + MIR3 SINE MIR 15 141 -67 1676 157 82 0 chr10 119825456 119825736 -20491029 + AluJb SINE Alu 7 309 -3 345 47 0 0 chr10 119825738 119825781 -20490984 + (GGGAA)n Simple_repeat Simple_repeat 3 45 0 708 54 0 0 chr10 119825923 119826016 -20490749 + (GGGAA)n Simple_repeat Simple_repeat 2 94 0 542 328 36 5 chr10 119826349 119826544 -20490221 - MIR SINE MIR -36 226 26 2051 128 24 18 chr10 119826885 119827220 -20489545 - L1MC1 LINE L1 0 6333 5997 1686 134 4 0 chr10 119827708 119827973 -20488792 - AluSx SINE Alu 0 310 45 1891 204 82 72 chr10 119827987 119828396 -20488369 - L1ME3A LINE L1 -5 6165 5747 1776 166 31 0 chr10 119828396 119828686 -20488079 + AluJb SINE Alu 3 301 -11 1891 204 82 72 chr10 119828686 119828875 -20487890 - L1ME3A LINE L1 -423 5747 5561 5820 133 42 0 chr10 119831079 119832107 -20484658 - L1PA16 LINE L1 -1 6165 5107 322 285 179 20 chr10 119833461 119833612 -20483153 + MIR3 SINE MIR 21 195 -13 1501 168 56 19 chr10 119833638 119833906 -20482859 + AluJo SINE Alu 1 278 -34 322 196 9 98 chr10 119834155 119834267 -20482498 - MIR SINE MIR -50 212 111 2852 81 0 14 chr10 119835001 119835370 -20481395 - THE1B LTR MaLR 0 364 1 291 213 27 13 chr10 119835414 119835489 -20481276 - MER5B DNA MER1_type -7 171 96 197 370 50 0 chr10 119835679 119835779 -20480986 + L2 LINE L2 3182 3286 -27 1943 160 3 6 chr10 119835859 119836172 -20480593 - AluJb SINE Alu 0 312 1 191 217 43 0 chr10 119836281 119836327 -20480438 + L2 LINE L2 3184 3231 -82 2265 107 3 0 chr10 119836596 119836886 -20479879 - AluSx SINE Alu -21 291 1 2186 111 0 0 chr10 119837764 119838044 -20478721 + AluSx SINE Alu 1 280 -32 774 84 0 0 chr10 119838049 119838156 -20478609 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 878 153 17 74 chr10 119839364 119839540 -20477225 + AluSg/x SINE Alu 135 300 -10 1781 137 17 31 chr10 119839607 119839899 -20476866 - AluJb SINE Alu -24 288 1 484 139 25 0 chr10 119840809 119840888 -20475877 + MLT1C LTR MaLR 1 81 -386 313 316 39 36 chr10 119841170 119841336 -20475429 + MIR SINE MIR 7 172 -68 2324 100 0 0 chr10 119841392 119841691 -20475074 - AluSx SINE Alu -13 299 1 203 244 47 47 chr10 119841755 119841841 -20474924 - MIR SINE MIR -131 131 46 328 154 0 0 chr10 119842386 119842438 -20474327 + MER66A LTR ERV1 287 338 -140 207 0 0 0 chr10 119842735 119842758 -20474007 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 0 0 0 chr10 119843893 119843915 -20472850 + (CA)n Simple_repeat Simple_repeat 1 22 0 2107 137 3 3 chr10 119843921 119844220 -20472545 - AluSq SINE Alu -14 299 1 1768 123 4 19 chr10 119844435 119844704 -20472061 + AluJb SINE Alu 46 310 -2 281 324 43 14 chr10 119845218 119845357 -20471408 + MIR3 SINE MIR 49 191 -17 186 133 0 0 chr10 119846701 119846731 -20470034 + (A)n Simple_repeat Simple_repeat 1 30 0 1770 158 7 23 chr10 119846738 119847042 -20469723 + AluJo SINE Alu 1 299 -13 352 325 70 6 chr10 119847294 119847451 -20469314 + MIR SINE MIR 48 214 -48 241 289 0 0 chr10 119847697 119847749 -20469016 + polypyrimidine Low_complexity Low_complexity 3 54 0 189 147 0 0 chr10 119847749 119847783 -20468982 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 412 294 153 46 chr10 119847785 119848197 -20468568 - L2 LINE L2 -21 3292 2837 2380 92 3 3 chr10 119848918 119849224 -20467541 + AluSx SINE Alu 1 306 -6 734 302 18 0 chr10 119849465 119849690 -20467075 - MIR SINE MIR -22 240 12 2980 58 16 3 chr10 119850078 119850459 -20466306 + L1PA10 LINE L1 5779 6164 -4 2514 68 0 10 chr10 119851190 119851498 -20465267 + AluY SINE Alu 1 305 -6 307 337 51 34 chr10 119851875 119852053 -20464712 + MIR3 SINE MIR 20 200 -8 450 0 0 0 chr10 119854311 119854361 -20462404 + (CA)n Simple_repeat Simple_repeat 2 51 0 2265 124 0 0 chr10 119857338 119857645 -20459120 - AluSx SINE Alu -1 311 5 1750 179 10 10 chr10 119858279 119858591 -20458174 - AluJb SINE Alu 0 312 1 289 297 40 0 chr10 119858803 119858877 -20457888 + MER81 DNA DNA 1 77 -37 195 258 65 118 chr10 119860436 119860481 -20456284 + L2 LINE L2 3208 3247 -66 1824 148 39 0 chr10 119860481 119860647 -20456118 - AluJo SINE Alu -17 295 112 210 37 0 0 chr10 119860647 119860674 -20456091 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1824 148 39 0 chr10 119860674 119860791 -20455974 - AluJo SINE Alu -200 112 1 195 258 65 118 chr10 119860791 119860838 -20455927 + L2 LINE L2 3247 3295 -18 325 366 38 9 chr10 119862054 119862267 -20454498 - MIR SINE MIR -22 240 22 287 287 11 21 chr10 119862404 119862513 -20454252 + MIR SINE MIR 30 137 -71 282 284 86 108 chr10 119862642 119862874 -20453891 + MIR SINE MIR 19 245 -17 1914 88 12 4 chr10 119862877 119863128 -20453637 - AluY SINE Alu -18 293 41 2479 86 0 0 chr10 119863340 119863643 -20453122 - AluSq SINE Alu -10 303 1 231 114 0 0 chr10 119863703 119863738 -20453027 + (A)n Simple_repeat Simple_repeat 1 35 0 189 107 0 0 chr10 119864175 119864203 -20452562 + (A)n Simple_repeat Simple_repeat 1 28 0 430 215 329 0 chr10 119864552 119864771 -20451994 - L1ME4a LINE L1 -14 6107 5817 1518 184 4 8 chr10 119865797 119866058 -20450707 - AluJb SINE Alu -8 304 45 2117 142 0 19 chr10 119866598 119866916 -20449849 - AluSx SINE Alu 0 312 1 294 306 131 6 chr10 119867175 119867335 -20449430 - MIR3 SINE MIR -25 183 4 394 224 96 16 chr10 119870329 119870454 -20446311 - L2 LINE L2 0 3313 3179 928 135 0 29 chr10 119870984 119871154 -20445611 - L1M4 LINE L1 -847 5299 5135 238 288 15 0 chr10 119871763 119871829 -20444936 + L2 LINE L2 3245 3311 -2 715 176 78 73 chr10 119871942 119871987 -20444778 + MER6B DNA MER2_type 1 44 -821 2613 40 0 7 chr10 119871987 119872288 -20444477 - AluY SINE Alu -12 299 1 715 176 78 73 chr10 119872288 119872447 -20444318 + MER6B DNA MER2_type 44 206 -4 26 0 0 0 chr10 119873099 119873125 -20443640 + AT_rich Low_complexity Low_complexity 1 26 0 2302 117 0 3 chr10 119873437 119873745 -20443020 - AluSx SINE Alu -5 307 1 1160 88 0 0 chr10 119873934 119874071 -20442694 - AluSq/x SINE Alu -176 137 1 22 0 0 0 chr10 119875058 119875080 -20441685 + AT_rich Low_complexity Low_complexity 1 22 0 1545 132 124 23 chr10 119875645 119875911 -20440854 + AluJo SINE Alu 2 294 -8 2141 89 4 4 chr10 119876759 119877063 -20439702 - AluY SINE Alu 0 304 1 2627 52 0 3 chr10 119877259 119877566 -20439199 + AluY SINE Alu 1 306 -5 901 332 54 0 chr10 119877826 119878290 -20438475 + L2 LINE L2 2824 3312 -1 2192 125 3 0 chr10 119878630 119878933 -20437832 + AluSx SINE Alu 1 304 -8 422 295 83 67 chr10 119879147 119879331 -20437434 - MIR SINE MIR -3 259 68 1799 157 0 62 chr10 119879331 119879363 -20437402 - AluJo SINE Alu -6 306 274 191 36 36 0 chr10 119879363 119879391 -20437374 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1799 157 0 62 chr10 119879391 119879683 -20437082 - AluJo SINE Alu -38 274 2 422 295 83 67 chr10 119879683 119879752 -20437013 - MIR SINE MIR -194 68 2 220 203 0 40 chr10 119880112 119880186 -20436579 + A-rich Low_complexity Low_complexity 5 75 0 554 250 22 88 chr10 119880637 119880739 -20436026 - MIR SINE MIR -49 213 133 661 170 7 64 chr10 119880739 119880880 -20435885 - FLAM_C SINE Alu 0 133 1 554 250 22 88 chr10 119880880 119881005 -20435760 - MIR SINE MIR -129 133 1 21 36 0 0 chr10 119881967 119881995 -20434770 + AT_rich Low_complexity Low_complexity 1 28 0 269 306 25 82 chr10 119882723 119882874 -20433891 + L2 LINE L2 2550 2689 -625 2490 71 0 0 chr10 119882874 119883169 -20433596 - AluY SINE Alu -16 295 1 269 306 25 82 chr10 119883169 119883213 -20433552 + L2 LINE L2 2689 2734 -580 2293 136 32 0 chr10 119883227 119883573 -20433192 + THE1B LTR MaLR 1 357 -7 447 308 114 32 chr10 119883676 119884053 -20432712 + L2 LINE L2 2904 3311 -2 2381 77 0 7 chr10 119884849 119885171 -20431594 + AluSq SINE Alu 1 320 0 656 264 85 21 chr10 119885404 119885639 -20431126 - MIR SINE MIR -6 256 7 2053 122 3 3 chr10 119886225 119886511 -20430254 - AluSg SINE Alu -24 286 1 1835 116 80 47 chr10 119886882 119887244 -20429521 + THE1C LTR MaLR 2 375 0 199 304 120 22 chr10 119887465 119887557 -20429208 + MIR SINE MIR 1 101 -161 238 316 96 44 chr10 119887588 119887724 -20429041 + MIR SINE MIR 104 246 -16 2075 135 3 3 chr10 119891836 119892132 -20424633 - AluSx SINE Alu -16 296 1 1226 80 12 0 chr10 119893620 119893783 -20422982 - BC200 scRNA scRNA -34 166 2 351 0 0 0 chr10 119893783 119893790 -20422975 + (TG)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr10 119893790 119893829 -20422936 + (TG)n Simple_repeat Simple_repeat 2 40 0 550 189 0 0 chr10 119893867 119893962 -20422803 - FLAM_C SINE Alu -25 118 24 183 42 0 0 chr10 119894042 119894066 -20422699 + (TC)n Simple_repeat Simple_repeat 1 24 0 383 310 123 30 chr10 119895962 119896165 -20420600 + L1M4 LINE L1 3956 4177 -1969 701 283 109 43 chr10 119896184 119896835 -20419930 + L1M4 LINE L1 4298 4991 -1155 1776 161 3 11 chr10 119896839 119897125 -20419640 + AluJb SINE Alu 3 286 -26 207 0 0 0 chr10 119897138 119897161 -20419604 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1834 164 0 20 chr10 119897491 119897795 -20418970 - AluJb SINE Alu -14 298 1 557 265 61 15 chr10 119898345 119898541 -20418224 + MIR SINE MIR 2 206 -56 2289 116 0 0 chr10 119898600 119898901 -20417864 - AluSx SINE Alu -11 301 1 1093 193 58 0 chr10 119902225 119902432 -20414333 + MER20 DNA MER1_type 1 219 0 1826 133 13 66 chr10 119904858 119905039 -20411726 - AluJo SINE Alu -12 300 142 2445 75 0 3 chr10 119905039 119905333 -20411432 - AluSc SINE Alu -15 294 2 1826 133 13 66 chr10 119905333 119905468 -20411297 - AluJo SINE Alu -170 142 1 221 274 29 53 chr10 119905785 119905927 -20410838 + MER5A DNA MER1_type 5 133 -45 582 97 54 0 chr10 119905943 119906036 -20410729 - L1MB1 LINE L1 0 6168 6071 2296 97 3 0 chr10 119906325 119906615 -20410150 - AluSc SINE Alu -13 296 6 2332 73 0 0 chr10 119906716 119906991 -20409774 - AluSg SINE Alu -27 283 9 1753 145 0 0 chr10 119907050 119907298 -20409467 - AluSx SINE Alu -64 248 1 25 0 0 0 chr10 119908214 119908239 -20408526 + AT_rich Low_complexity Low_complexity 1 25 0 2199 123 0 3 chr10 119908241 119908543 -20408222 + AluSx SINE Alu 1 301 -11 1695 169 0 37 chr10 119908841 119909161 -20407604 - AluJo SINE Alu 0 309 1 1677 153 38 10 chr10 120009595 120009883 -20306882 + AluJo SINE Alu 1 296 -16 1480 187 137 6 chr10 120011363 120011705 -20305060 + MLT1B LTR MaLR 1 387 -3 207 337 36 24 chr10 120011891 120011974 -20304791 + L2 LINE L2 3189 3272 0 2055 133 7 0 chr10 120012058 120012351 -20304414 + AluSx SINE Alu 1 295 -17 989 196 18 18 chr10 120012460 120012679 -20304086 + MER20 DNA MER1_type 1 219 0 737 156 181 6 chr10 120013599 120013759 -20303006 + MER53 DNA DNA 1 188 -1 1201 285 106 11 chr10 120014434 120014729 -20302036 + L2 LINE L2 2826 3178 -135 2057 109 0 20 chr10 120014729 120015033 -20301732 - AluSx SINE Alu -14 298 1 1201 285 106 11 chr10 120015033 120015179 -20301586 + L2 LINE L2 3178 3309 -4 199 346 15 62 chr10 120019871 120020001 -20296764 + MIR SINE MIR 74 197 -65 270 313 20 10 chr10 120021882 120021981 -20294784 - MIR3 SINE MIR -3 205 106 2221 99 0 0 chr10 120022999 120023301 -20293464 - AluSx SINE Alu -10 302 1 2142 75 8 0 chr10 120023316 120023581 -20293184 - AluY SINE Alu 0 311 45 204 319 178 12 chr10 120025647 120025816 -20290949 + L2 LINE L2 3076 3272 0 1888 173 3 22 chr10 120026056 120026374 -20290391 + AluJo SINE Alu 1 312 0 1718 71 18 0 chr10 120028642 120028868 -20287897 - MER30 DNA MER1_type 0 230 1 856 194 12 12 chr10 120028998 120029158 -20287607 + FRAM SINE Alu 1 158 -18 367 323 8 24 chr10 120029182 120029309 -20287456 - MIR SINE MIR -118 144 20 197 132 26 0 chr10 120030110 120030148 -20286617 + (CATA)n Simple_repeat Simple_repeat 4 42 0 396 241 105 30 chr10 120030307 120030440 -20286325 - MIR3 SINE MIR -12 196 54 2088 113 3 34 chr10 120031691 120032009 -20284756 + AluSx SINE Alu 1 309 0 204 296 80 0 chr10 120032317 120032405 -20284360 + MIR SINE MIR 59 153 -109 2214 131 0 3 chr10 120032489 120032801 -20283964 + AluSx SINE Alu 1 311 -1 2200 125 3 0 chr10 120033468 120033771 -20282994 + AluSx SINE Alu 1 304 -8 872 177 7 7 chr10 120033788 120033935 -20282830 - AluJo/FRAM SINE Alu -30 282 136 436 183 0 0 chr10 120033935 120034006 -20282759 - AluJ/FLAM SINE Alu -240 72 2 2267 113 7 0 chr10 120034052 120034353 -20282412 + AluSq SINE Alu 1 303 -10 2258 107 0 35 chr10 120034784 120035102 -20281663 + AluSp SINE Alu 1 307 -6 851 133 0 15 chr10 120035114 120035249 -20281516 + FLAM_C SINE Alu 1 133 0 213 296 0 25 chr10 120035527 120035608 -20281157 + (CATA)n Simple_repeat Simple_repeat 2 80 0 2157 125 0 28 chr10 120037045 120037365 -20279400 - AluSx SINE Alu -1 311 1 454 297 65 0 chr10 120038682 120038837 -20277928 + MIR SINE MIR 79 243 -19 2274 93 0 26 chr10 120039234 120039547 -20277218 + AluSx SINE Alu 1 305 -7 2290 90 7 7 chr10 120039640 120039939 -20276826 + AluY SINE Alu 1 299 -12 1818 147 3 24 chr10 120040183 120040476 -20276289 - AluJo SINE Alu -22 290 4 861 155 7 34 chr10 120040476 120040617 -20276148 - AluJo SINE Alu -173 139 1 1350 151 36 4 chr10 120041387 120041612 -20275153 - AluJb SINE Alu -18 294 63 265 281 0 12 chr10 120042533 120042615 -20274150 - MIR SINE MIR -125 137 57 539 316 69 40 chr10 120042720 120043024 -20273741 - HAL1 LINE L1 -335 2172 1860 581 157 10 0 chr10 120043030 120043132 -20273633 - AluJb SINE Alu -19 293 191 852 199 35 10 chr10 120043132 120043333 -20273432 - HAL1 LINE L1 -644 1863 1658 6252 57 38 19 chr10 120043356 120044206 -20272559 - SVA Other Other -2 1384 519 225 200 80 0 chr10 120144652 120144702 -20172063 - L2 LINE L2 0 3272 3219 1346 209 29 29 chr10 120145434 120145745 -20171020 - AluJb SINE Alu -1 311 1 1138 129 5 52 chr10 120145851 120146044 -20170721 + Tigger2a DNA MER2_type 1 184 -250 1071 170 16 0 chr10 120146153 120146335 -20170430 - AluJb SINE Alu -4 308 124 832 167 35 0 chr10 120146797 120146941 -20169824 + MER5A DNA MER1_type 1 149 -40 361 161 0 0 chr10 120147044 120147106 -20169659 + MER5A DNA MER1_type 128 189 0 215 380 62 0 chr10 120148541 120148654 -20168111 + L3b LINE CR1 1215 1334 -249 220 288 144 59 chr10 120149077 120149230 -20167535 + MIR SINE MIR 23 188 -74 2495 152 49 7 chr10 120149994 120150441 -20166324 + MLT1C LTR MaLR 1 466 -1 186 320 0 0 chr10 120150603 120150653 -20166112 + L2 LINE L2 3004 3053 -219 2256 104 3 0 chr10 120151165 120151464 -20165301 + AluSq SINE Alu 3 302 -11 881 229 80 0 chr10 120151567 120151768 -20164997 + MER20 DNA MER1_type 3 219 0 340 283 25 8 chr10 120152986 120153106 -20163659 + MIR3 SINE MIR 66 187 -21 207 0 0 0 chr10 120153158 120153181 -20163584 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2866 13 0 0 chr10 120157447 120157755 -20159010 - AluY SINE Alu -3 308 1 2211 97 13 3 chr10 120158847 120159145 -20157620 - AluSx SINE Alu -11 301 1 384 309 125 34 chr10 120159263 120159558 -20157207 - L2 LINE L2 -6 3266 2945 441 161 11 0 chr10 120159790 120159877 -20156888 + AluY SINE Alu 216 303 -8 378 270 32 16 chr10 120160479 120160605 -20156160 + HAL1b LINE L1 1203 1330 -18 1938 145 0 36 chr10 120160889 120161192 -20155573 + AluSx SINE Alu 11 302 -10 354 182 0 15 chr10 120161196 120161262 -20155503 + L2 LINE L2 3249 3313 0 2184 109 0 26 chr10 120161592 120161896 -20154869 - AluSg SINE Alu -13 297 2 529 327 40 10 chr10 120161940 120162139 -20154626 - MIR SINE MIR -55 207 3 634 261 88 13 chr10 120162221 120162447 -20154318 - MIR SINE MIR 0 262 20 359 238 166 13 chr10 120162766 120162917 -20153848 - MIR SINE MIR -58 204 31 2552 65 0 3 chr10 120163111 120163421 -20153344 - AluY SINE Alu -2 309 1 21 0 0 0 chr10 120163870 120163891 -20152874 + AT_rich Low_complexity Low_complexity 1 21 0 2299 102 0 0 chr10 120164093 120164386 -20152379 + AluSx SINE Alu 1 293 -19 859 239 33 0 chr10 120164584 120164797 -20151968 + MIR SINE MIR 22 241 -21 2885 16 0 0 chr10 120165235 120165545 -20151220 + AluYb8 SINE Alu 1 310 -8 1028 83 7 14 chr10 120165589 120165734 -20151031 + L1PA10 LINE L1 6022 6165 -3 21 71 0 0 chr10 120166218 120166260 -20150505 + AT_rich Low_complexity Low_complexity 1 42 0 270 302 108 43 chr10 120166397 120166536 -20150229 + MIR3 SINE MIR 19 166 -42 2287 80 7 0 chr10 120166635 120166923 -20149842 - AluSq SINE Alu -2 311 22 222 343 98 7 chr10 120167717 120167860 -20148905 + L2 LINE L2 2973 3128 -185 1610 170 0 50 chr10 120167885 120167923 -20148842 - L1M2 LINE L1 -679 5633 5595 1884 155 19 23 chr10 120167923 120168232 -20148533 - AluJb SINE Alu -4 308 1 1610 170 0 50 chr10 120168232 120168510 -20148255 - L1M2 LINE L1 -717 5595 5333 446 266 18 0 chr10 120170042 120170151 -20146614 + MIR3 SINE MIR 52 162 -46 1882 127 3 52 chr10 120170398 120170743 -20146022 - AluSx SINE Alu 0 336 6 550 90 0 0 chr10 120171321 120171399 -20145366 + L1PA10 LINE L1 6091 6168 0 1127 151 77 64 chr10 120171399 120171622 -20145143 - MER33 DNA MER1_type -2283 302 83 2113 129 3 10 chr10 120171622 120171932 -20144833 - AluSc SINE Alu -1 308 1 2256 116 0 6 chr10 120171937 120172248 -20144517 - AluSq SINE Alu -4 309 1 1127 151 77 64 chr10 120172248 120172316 -20144449 - MER33 DNA MER1_type -2505 80 1 547 183 29 17 chr10 120172607 120172782 -20143983 + CT-rich Low_complexity Low_complexity 4 180 0 316 109 0 0 chr10 120172788 120172834 -20143931 - L1MC2 LINE L1 -26 6318 6273 568 117 170 0 chr10 120173724 120173818 -20142947 - FLAM_A SINE Alu -32 110 1 225 333 0 0 chr10 120173819 120173885 -20142880 - L2 LINE L2 -7 3306 3241 263 292 172 35 chr10 120174049 120174416 -20142349 - L2 LINE L2 -728 2586 2170 538 251 188 20 chr10 120175264 120175519 -20141246 + L2 LINE L2 3016 3313 0 2123 117 0 0 chr10 120175562 120175867 -20140898 - AluSx SINE Alu 0 305 1 2364 220 56 16 chr10 120176558 120177057 -20139708 + LTR40a LTR ERVL 1 519 0 1666 279 87 33 chr10 120177372 120178235 -20138530 + L2 LINE L2 2392 3311 -2 421 224 59 88 chr10 120178235 120178405 -20138360 - MER46A DNA MER2_type -69 167 3 * 1236 197 0 22 chr10 120178264 120178492 -20138273 + MER46A DNA MER2_type 3 225 -11 480 249 89 16 chr10 120178628 120178975 -20137790 - MER113 DNA MER1_type? -90 431 6 210 356 62 20 chr10 120179783 120179929 -20136836 + MER5A DNA MER1_type 6 157 -32 4053 132 25 34 chr10 120179934 120180520 -20136245 - Tigger3(Golem) DNA MER2_type -3 3025 2435 1020 143 0 117 chr10 120180520 120180685 -20136080 + FAM SINE Alu 1 141 -170 2153 133 3 0 chr10 120180685 120180978 -20135787 - AluSx SINE Alu -17 295 2 1020 143 0 117 chr10 120180978 120181008 -20135757 + FAM SINE Alu 141 173 -2 243 61 0 0 chr10 120181008 120181041 -20135724 + (CA)n Simple_repeat Simple_repeat 2 34 0 4053 132 25 34 chr10 120181041 120181180 -20135585 - Tigger3(Golem) DNA MER2_type -591 2437 2306 691 184 0 0 chr10 120181184 120181287 -20135478 - Tigger3(Golem) DNA MER2_type -2923 106 4 2180 118 0 31 chr10 120181422 120181743 -20135022 + AluSx SINE Alu 1 311 -1 428 345 130 17 chr10 120183500 120183845 -20132920 - L3b LINE CR1 -94 1489 1106 188 256 0 0 chr10 120184297 120184340 -20132425 - L2 LINE L2 -93 3220 3178 216 0 0 0 chr10 120186175 120186199 -20130566 + (TTTTC)n Simple_repeat Simple_repeat 1 24 0 6702 164 25 15 chr10 120186199 120186830 -20129935 - L1PA16 LINE L1 0 6166 5543 360 0 0 0 chr10 120186830 120186870 -20129895 + (TA)n Simple_repeat Simple_repeat 2 41 0 * 585 0 0 0 chr10 120186869 120186934 -20129831 + (TG)n Simple_repeat Simple_repeat 2 66 0 6702 164 25 15 chr10 120186870 120188473 -20128292 - L1PA16 LINE L1 -623 5543 3982 1632 195 40 61 chr10 120189688 120189826 -20126939 - LTR37B LTR ERV1 0 468 329 1603 188 0 20 chr10 120189826 120190118 -20126647 + AluJo SINE Alu 1 286 -26 181 0 69 0 chr10 120190118 120190147 -20126618 + (TA)n Simple_repeat Simple_repeat 1 31 0 1632 195 40 61 chr10 120190147 120190485 -20126280 - LTR37B LTR ERV1 -137 331 1 1685 123 31 4 chr10 120190506 120190766 -20125999 + L1MB3 LINE L1 5915 6181 -2 316 253 74 0 chr10 120191026 120191121 -20125644 - L1MC/D LINE L1 -1985 5823 5722 2394 99 0 3 chr10 120191252 120191566 -20125199 + AluSq SINE Alu 1 313 0 2184 128 3 0 chr10 120191633 120191939 -20124826 + AluSq SINE Alu 1 307 -6 191 305 179 34 chr10 120192025 120192382 -20124383 - L2 LINE L2 -910 2404 1996 2295 108 0 6 chr10 120195487 120195801 -20120964 + AluSx SINE Alu 1 312 0 23 33 0 0 chr10 120196172 120196202 -20120563 + AT_rich Low_complexity Low_complexity 1 30 0 189 273 0 23 chr10 120196999 120197043 -20119722 - MIR SINE MIR -150 58 16 440 185 92 25 chr10 120197250 120197369 -20119396 + MER96 DNA MER1_type? 2 128 -47 197 209 23 0 chr10 120197614 120197657 -20119108 + MIR SINE MIR 78 121 -87 2300 95 0 3 chr10 120198805 120199099 -20117666 - AluSq SINE Alu -7 306 14 191 163 28 248 chr10 120199885 120200026 -20116739 + L2 LINE L2 3151 3260 -12 341 326 0 11 chr10 120200208 120200300 -20116465 + MIR3 SINE MIR 108 198 -10 2451 70 3 3 chr10 120201218 120201520 -20115245 + AluSx SINE Alu 1 302 -10 375 280 84 62 chr10 120201601 120201826 -20114939 - MIR SINE MIR -13 249 20 284 324 209 7 chr10 120202043 120202182 -20114583 + MER5A DNA MER1_type 22 188 -1 377 276 41 24 chr10 120202987 120203110 -20113655 - MIR SINE MIR -59 149 25 2269 108 3 3 chr10 120203776 120204083 -20112682 - AluSx SINE Alu -5 307 1 223 273 13 39 chr10 120204096 120204173 -20112592 + MER5A DNA MER1_type 64 138 -51 1897 139 3 36 chr10 120204269 120204578 -20112187 - AluJo SINE Alu -12 300 2 368 286 98 39 chr10 120205869 120206103 -20110662 + MIR SINE MIR 15 262 0 257 135 0 0 chr10 120206178 120206215 -20110550 + L1MC4a LINE L1 5542 5578 -543 505 281 83 83 chr10 120206335 120206590 -20110175 + MER90 LTR ERV1 151 409 -166 2106 100 11 4 chr10 120206590 120206902 -20109863 + AluSq SINE Alu 1 314 0 505 281 83 83 chr10 120206902 120207055 -20109710 + MER90 LTR ERV1 408 560 -15 768 275 64 34 chr10 120207065 120207392 -20109373 + L1MC4a LINE L1 5605 5941 -1867 24 0 0 0 chr10 120207547 120207571 -20109194 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 120207808 120207829 -20108936 + AT_rich Low_complexity Low_complexity 1 21 0 2554 141 8 3 chr10 120207888 120208272 -20108493 - L1MC1 LINE L1 -19 6314 5929 448 234 84 52 chr10 120208568 120208722 -20108043 + MIR SINE MIR 90 248 -14 290 274 131 0 chr10 120208860 120208944 -20107821 - MER51C LTR ERV1 -258 382 288 * 671 218 264 25 chr10 120208929 120209213 -20107552 - MER51A LTR ERV1 -282 352 1 27 29 0 0 chr10 120210187 120210221 -20106544 + AT_rich Low_complexity Low_complexity 1 34 0 1544 168 14 47 chr10 120211899 120212196 -20104569 + AluJo SINE Alu 1 287 -25 457 290 76 7 chr10 120212321 120212466 -20104299 + MIR SINE MIR 10 164 -98 337 244 22 22 chr10 120212769 120212859 -20103906 - MIR3 SINE MIR -10 198 109 26 30 0 0 chr10 120213226 120213259 -20103506 + AT_rich Low_complexity Low_complexity 1 33 0 2261 150 10 125 chr10 120215127 120215647 -20101118 + LOR1b LTR ERV1 1 460 -1 276 130 0 0 chr10 120216390 120216436 -20100329 + (TG)n Simple_repeat Simple_repeat 2 47 0 977 150 0 0 chr10 120216809 120216979 -20099786 + FLAM_A SINE Alu 1 170 0 983 172 17 6 chr10 120217637 120217817 -20098948 + L1MB5 LINE L1 5648 5829 -345 1814 127 32 127 chr10 120217817 120218195 -20098570 + MER7A DNA MER2_type 1 340 -6 2048 132 14 37 chr10 120218198 120218553 -20098212 + L1MB5 LINE L1 5827 6173 -1 651 119 10 10 chr10 120219736 120219837 -20096928 + AluY SINE Alu 2 102 -216 237 278 45 72 chr10 120220298 120220309 -20096456 + MER5A DNA MER1_type 3 13 -165 2143 130 0 10 chr10 120220309 120220617 -20096148 + AluSx SINE Alu 1 305 -7 237 278 45 72 chr10 120220617 120220760 -20096005 + MER5A DNA MER1_type 13 148 -30 203 229 128 55 chr10 120221636 120221745 -20095020 + L2 LINE L2 3197 3313 0 21 0 0 0 chr10 120221817 120221838 -20094927 + AT_rich Low_complexity Low_complexity 1 21 0 384 231 106 0 chr10 120221981 120222085 -20094680 - MIR SINE MIR -30 232 118 423 0 0 0 chr10 120222181 120222228 -20094537 + (CA)n Simple_repeat Simple_repeat 2 48 0 307 286 87 8 chr10 120223049 120223175 -20093590 + MIR SINE MIR 48 183 -79 4706 190 61 34 chr10 120223175 120223803 -20092962 + MER45B DNA AcHobo 1 671 -910 2268 99 0 0 chr10 120223803 120224125 -20092640 + AluSx SINE Alu 1 322 0 4706 190 61 34 chr10 120224125 120224506 -20092259 + MER45B DNA AcHobo 671 1040 0 252 0 0 0 chr10 120224806 120224834 -20091931 + (A)n Simple_repeat Simple_repeat 1 28 0 1384 262 76 52 chr10 120224890 120225437 -20091328 - L2 LINE L2 0 3313 2747 1619 159 7 45 chr10 120225437 120225750 -20091015 - AluJo SINE Alu 0 304 3 1384 262 76 52 chr10 120225750 120225862 -20090903 - L2 LINE L2 -566 2747 2639 1721 243 76 76 chr10 120226089 120226892 -20089873 + HAL1b LINE L1 90 892 -456 1858 181 7 0 chr10 120227135 120227434 -20089331 - AluJo SINE Alu -11 301 1 21 0 0 0 chr10 120227526 120227547 -20089218 + AT_rich Low_complexity Low_complexity 1 21 0 2589 68 0 0 chr10 120227557 120227864 -20088901 + AluY SINE Alu 1 307 -4 380 71 18 0 chr10 120227864 120227920 -20088845 + (TA)n Simple_repeat Simple_repeat 2 58 0 1109 227 122 4 chr10 120228750 120229028 -20087737 + LTR16C LTR ERVL 160 470 -21 31 0 0 0 chr10 120230523 120230554 -20086211 + AT_rich Low_complexity Low_complexity 1 31 0 2174 119 0 10 chr10 120230554 120230856 -20085909 - AluSx SINE Alu -13 299 1 3167 199 8 2 chr10 120231633 120232256 -20084509 + L1MB7 LINE L1 5539 6165 -19 21 0 0 0 chr10 120232504 120232525 -20084240 + AT_rich Low_complexity Low_complexity 1 21 0 286 274 29 29 chr10 120232548 120232650 -20084115 + MIR SINE MIR 29 130 -78 1933 134 0 14 chr10 120232673 120232957 -20083808 + AluSx SINE Alu 1 280 -32 495 0 0 0 chr10 120232958 120233013 -20083752 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2318 103 0 3 chr10 120233411 120233712 -20083053 - AluSg SINE Alu -10 300 1 564 268 74 26 chr10 120234422 120234653 -20082112 - MIR SINE MIR -13 249 8 500 287 69 61 chr10 120236617 120236818 -20079947 + MIR SINE MIR 2 207 -55 1632 195 0 7 chr10 120236818 120237125 -20079640 + AluJo SINE Alu 1 305 -7 500 287 69 61 chr10 120237125 120237170 -20079595 + MIR SINE MIR 207 250 -12 31 58 0 0 chr10 120237828 120237880 -20078885 + AT_rich Low_complexity Low_complexity 1 52 0 362 135 0 0 chr10 120237880 120237932 -20078833 - U4 snRNA snRNA -1 144 93 728 145 0 83 chr10 120238024 120238169 -20078596 - FLAM_A SINE Alu 0 133 1 304 325 91 7 chr10 120238632 120238786 -20077979 - MIR SINE MIR -81 181 15 1411 192 14 136 chr10 120239490 120239547 -20077218 + L1MD3 LINE L1 5433 5495 -689 2340 105 3 0 chr10 120239547 120239851 -20076914 + AluSx SINE Alu 1 305 -7 1411 192 14 136 chr10 120239851 120240079 -20076686 + L1MD3 LINE L1 5495 5312 -872 432 135 0 27 chr10 120240079 120240153 -20076612 + U13 snRNA snRNA 33 104 0 1411 192 14 136 chr10 120240153 120240493 -20076272 + L1MD3 LINE L1 5311 5691 -493 * 2099 179 60 27 chr10 120240167 120240647 -20076118 + L1MB7 LINE L1 5679 6174 -10 203 200 0 83 chr10 120242693 120242753 -20074012 - L3b LINE CR1 -1 1582 1528 1784 139 24 37 chr10 120242788 120243082 -20073683 + AluJo SINE Alu 4 293 -19 745 115 54 23 chr10 120243153 120243283 -20073482 - L1PA2 LINE L1 0 6155 6022 228 282 164 9 chr10 120243324 120243434 -20073331 - MIR3 SINE MIR -68 140 14 941 121 0 13 chr10 120243866 120244015 -20072750 + L1PB1 LINE L1 6005 6151 0 2264 100 7 0 chr10 120248103 120248394 -20068371 - AluSx SINE Alu -11 301 9 2136 62 4 0 chr10 120248548 120248808 -20067957 + AluY SINE Alu 35 295 -16 303 205 94 53 chr10 120249920 120250091 -20066674 + Charlie7 DNA MER1_type 2432 2609 -3 355 306 146 5 chr10 120250231 120250430 -20066335 + MIR SINE MIR 29 255 -7 301 250 0 45 chr10 120250550 120250638 -20066127 - Charlie8 DNA MER1_type -2180 237 154 1396 202 46 7 chr10 120251201 120251503 -20065262 - L1ME2 LINE L1 -7 6157 5844 654 230 0 15 chr10 120252180 120252315 -20064450 - FLAM_A SINE Alu 0 133 1 203 0 37 0 chr10 120252987 120253014 -20063751 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1564 176 29 20 chr10 120254167 120254473 -20062292 - AluJb SINE Alu -3 309 1 3082 216 32 77 chr10 120254601 120255541 -20061224 - L1ME3 LINE L1 -1 6161 5180 1682 162 6 48 chr10 120255541 120255855 -20060910 - AluJo SINE Alu -11 301 1 212 75 0 25 chr10 120255860 120255900 -20060865 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 2060 128 0 4 chr10 120255900 120256181 -20060584 - AluSx SINE Alu -32 280 1 3082 216 32 77 chr10 120256181 120256391 -20060374 - L1ME3 LINE L1 -984 5178 5069 367 194 19 46 chr10 120256559 120256667 -20060098 + MER58C DNA MER1_type 104 208 -7 2397 86 3 3 chr10 120256757 120257061 -20059704 + AluSp SINE Alu 2 305 -8 244 196 0 0 chr10 120257251 120257302 -20059463 + HAL1 LINE L1 2457 2507 0 769 278 28 0 chr10 120257585 120257801 -20058964 - MIR SINE MIR -26 236 15 2151 124 3 7 chr10 120258591 120258898 -20057867 - AluSq SINE Alu -7 306 1 1853 172 0 13 chr10 120263630 120263938 -20052827 + AluJo SINE Alu 1 304 -8 228 225 0 0 chr10 120263981 120264021 -20052744 + polypyrimidine Low_complexity Low_complexity 1 40 0 1937 165 10 3 chr10 120264021 120264330 -20052435 - AluJo SINE Alu -1 311 1 342 234 80 15 chr10 120264529 120264666 -20052099 + MER103 DNA DNA 20 165 -1 201 308 99 11 chr10 120264734 120264825 -20051940 - MIR3 SINE MIR -23 185 87 239 314 23 0 chr10 120265465 120265551 -20051214 - MIR3 SINE MIR -54 154 67 207 319 65 76 chr10 120265649 120265834 -20050931 - MIR3 SINE MIR -7 201 19 1137 261 71 47 chr10 120266043 120266492 -20050273 + MLT1D LTR MaLR 46 505 0 360 59 0 0 chr10 120267047 120267098 -20049667 + (CA)n Simple_repeat Simple_repeat 2 52 0 1983 154 3 6 chr10 120267274 120267645 -20049120 + AluJo SINE Alu 1 370 0 2191 122 0 0 chr10 120268106 120268400 -20048365 + AluSx SINE Alu 7 300 -12 271 234 141 110 chr10 120268557 120268784 -20047981 + MIR SINE MIR 25 258 -4 307 227 0 0 chr10 120268798 120268864 -20047901 - AluJ/monomer SINE Alu -1 299 234 2797 88 3 3 chr10 120269335 120269699 -20047066 + THE1B LTR MaLR 1 364 0 1592 186 131 21 chr10 120269775 120270195 -20046570 - MLT1C LTR MaLR 0 467 2 2231 98 3 28 chr10 120270289 120270607 -20046158 + AluSg SINE Alu 1 310 0 2168 103 14 3 chr10 120270840 120271130 -20045635 - AluSx SINE Alu -19 293 1 517 313 73 21 chr10 120271134 120271367 -20045398 + L2 LINE L2 3027 3271 -1 2035 137 7 7 chr10 120271584 120271890 -20044875 + AluSx SINE Alu 1 306 -6 1044 186 6 0 chr10 120272592 120272769 -20043996 + MER58A DNA MER1_type 38 215 -9 429 281 194 6 chr10 120273047 120273207 -20043558 + MLT1H LTR MaLR 30 219 -330 2702 165 35 19 chr10 120273427 120273524 -20043241 + L1MC3 LINE L1 7255 7349 -436 180 0 0 0 chr10 120273524 120273544 -20043221 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2702 165 35 19 chr10 120273544 120273960 -20042805 + L1MC3 LINE L1 7349 7776 -9 1952 154 3 0 chr10 120273961 120274260 -20042505 + AluSq SINE Alu 1 300 -13 2378 74 3 0 chr10 120274266 120274582 -20042183 + AluSp SINE Alu 1 317 0 2075 122 31 0 chr10 120274611 120274899 -20041866 + AluSq SINE Alu 1 297 -16 272 313 46 46 chr10 120275650 120275845 -20040920 - MIR SINE MIR -1 261 67 2270 101 3 3 chr10 120276750 120277046 -20039719 + AluSg SINE Alu 1 296 -14 1939 140 10 20 chr10 120277063 120277363 -20039402 + AluSx SINE Alu 1 297 -15 1935 201 42 16 chr10 120277979 120278363 -20038402 + MSTD LTR MaLR 3 396 0 844 240 16 21 chr10 120279200 120279392 -20037373 - MER63A DNA MER1_type -19 191 1 1701 123 0 4 chr10 120280048 120280291 -20036474 + AluSx SINE Alu 1 242 -70 2343 104 13 0 chr10 120280651 120280959 -20035806 + AluSp SINE Alu 1 312 -1 315 276 127 44 chr10 120281161 120281436 -20035329 + L2 LINE L2 2911 3208 -105 826 135 0 30 chr10 120281935 120282068 -20034697 + FLAM_C SINE Alu 9 137 -6 911 220 23 14 chr10 120282698 120282912 -20033853 - MIR SINE MIR -33 229 14 2365 90 0 19 chr10 120283133 120283444 -20033321 - AluSq SINE Alu -8 305 1 810 129 14 50 chr10 120283717 120283857 -20032908 + FLAM_C SINE Alu 9 143 0 761 254 30 57 chr10 120284162 120284372 -20032393 - Charlie8 DNA MER1_type -66 275 72 2267 105 0 7 chr10 120284372 120284668 -20032097 + AluSx SINE Alu 1 294 -18 761 254 30 57 chr10 120284668 120284721 -20032044 - Charlie8 DNA MER1_type -269 72 19 611 214 136 55 chr10 120284755 120284975 -20031790 + MER112 DNA MER1_type 23 260 0 2296 125 0 0 chr10 120285587 120285899 -20030866 + AluSx SINE Alu 1 312 0 226 230 150 40 chr10 120286397 120286497 -20030268 + MER91C DNA MER1_type 18 128 -12 378 256 73 70 chr10 120286670 120286943 -20029822 + HAL1 LINE L1 1924 2197 -310 514 180 0 55 chr10 120287272 120287400 -20029365 + AluSg/x SINE Alu 74 194 -116 551 138 0 0 chr10 120287563 120287643 -20029122 - MADE1 DNA Mariner 0 80 1 622 300 76 14 chr10 120288071 120288294 -20028471 - MIR SINE MIR -4 258 22 234 303 143 42 chr10 120288739 120288858 -20027907 + MIR SINE MIR 36 145 -63 2229 108 7 0 chr10 120288911 120289208 -20027557 - AluSx SINE Alu -13 299 1 191 100 0 50 chr10 120289229 120289269 -20027496 + (TTTCC)n Simple_repeat Simple_repeat 3 40 0 2042 147 0 0 chr10 120290235 120290528 -20026237 - AluSx SINE Alu -19 293 1 371 330 76 22 chr10 120290532 120290756 -20026009 - MIR SINE MIR -8 254 19 2141 128 0 0 chr10 120292156 120292454 -20024311 + AluSg SINE Alu 1 298 -12 217 216 65 93 chr10 120292880 120293019 -20023746 - MIR SINE MIR -55 153 19 1824 156 3 46 chr10 120293183 120293509 -20023256 - AluJo SINE Alu 0 312 1 565 244 30 0 chr10 120294044 120294175 -20022590 + MIR SINE MIR 57 191 -71 374 316 108 0 chr10 120294433 120294591 -20022174 + MER5A DNA MER1_type 9 183 -6 557 245 49 12 chr10 120294833 120294996 -20021769 - MIR SINE MIR -8 254 86 268 202 55 24 chr10 120295103 120295197 -20021568 - MIR SINE MIR -59 149 61 1270 161 54 92 chr10 120295831 120296009 -20020756 - MLT1B LTR MaLR -85 305 143 2482 108 39 30 chr10 120296009 120296370 -20020395 + THE1B LTR MaLR 1 364 0 1270 161 54 92 chr10 120296370 120296508 -20020257 - MLT1B LTR MaLR -247 143 1 885 290 159 35 chr10 120297618 120298574 -20018191 + HAL1 LINE L1 844 1918 -589 255 206 56 135 chr10 120298997 120299123 -20017642 + HAL1b LINE L1 770 885 -463 726 164 0 0 chr10 120299349 120299465 -20017300 + L1MD1 LINE L1 6023 6138 -104 816 191 0 8 chr10 120299510 120299641 -20017124 - FLAM_C SINE Alu -12 131 2 510 246 21 21 chr10 120299643 120299785 -20016980 - MER105 DNA DNA -58 146 5 3208 223 71 24 chr10 120299792 120300035 -20016730 + L1ME2 LINE L1 4450 4680 -1484 231 36 0 0 chr10 120300035 120300063 -20016702 + (CA)n Simple_repeat Simple_repeat 2 29 0 3208 223 71 24 chr10 120300063 120301439 -20015326 + L1ME2 LINE L1 4680 6154 -10 274 128 21 0 chr10 120301498 120301545 -20015220 + L1MC5 LINE L1 7840 7887 -74 2349 33 47 0 chr10 120302065 120302341 -20014424 - AluY SINE Alu -10 301 13 28 29 0 0 chr10 120302457 120302492 -20014273 + AT_rich Low_complexity Low_complexity 1 35 0 407 282 34 13 chr10 120302998 120303147 -20013618 - MIR SINE MIR -99 163 12 483 69 0 0 chr10 120303775 120303847 -20012918 + (TC)n Simple_repeat Simple_repeat 1 72 0 423 0 0 0 chr10 120303847 120303894 -20012871 + (TA)n Simple_repeat Simple_repeat 2 48 0 205 234 0 62 chr10 120305164 120305228 -20011537 - L2 LINE L2 -2 3270 3211 699 119 30 60 chr10 120306541 120306709 -20010056 - MER3 DNA MER1_type 0 2585 2423 292 224 82 24 chr10 120306690 120306775 -20009990 - MER3 DNA MER1_type -105 104 15 * 2016 133 4 0 chr10 120306811 120307090 -20009675 - AluSx SINE Alu -32 280 1 2182 106 0 10 chr10 120307176 120307499 -20009266 + AluSq SINE Alu 1 313 0 3623 232 60 57 chr10 120308399 120309524 -20007241 + MER69B DNA AcHobo 98 1225 -1 1283 153 9 26 chr10 120309778 120309808 -20006957 + AluJb SINE Alu 84 113 -199 2331 117 45 28 chr10 120309808 120310166 -20006599 - THE1B LTR MaLR 0 364 1 1283 153 9 26 chr10 120310166 120310363 -20006402 + AluJb SINE Alu 113 307 -5 1870 229 62 22 chr10 120311071 120311570 -20005195 - LTR33 LTR ERVL -2 519 1 2321 111 0 0 chr10 120311629 120311935 -20004830 + AluSx SINE Alu 1 306 -6 948 198 6 12 chr10 120312461 120312623 -20004142 + FRAM SINE Alu 1 161 -5 402 266 159 0 chr10 120313788 120313901 -20002864 - MIR3 SINE MIR -33 175 45 213 208 0 21 chr10 120314452 120314500 -20002265 + CT-rich Low_complexity Low_complexity 6 52 0 239 245 0 0 chr10 120314551 120314600 -20002165 + GA-rich Low_complexity Low_complexity 2 50 0 324 0 0 0 chr10 120315968 120316004 -20000761 + (CA)n Simple_repeat Simple_repeat 2 37 0 243 0 0 0 chr10 120316597 120316624 -20000141 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1090 181 30 10 chr10 120316949 120317148 -19999617 - MER20 DNA MER1_type -1 218 16 1890 141 11 0 chr10 120317190 120317467 -19999298 + AluJb SINE Alu 1 280 -32 245 98 24 0 chr10 120317471 120317512 -19999253 + (GGGGA)n Simple_repeat Simple_repeat 3 44 0 1085 121 6 0 chr10 120317520 120317694 -19999071 + (GGAA)n Simple_repeat Simple_repeat 2 176 0 358 114 29 14 chr10 120317694 120317764 -19999001 + GA-rich Low_complexity Low_complexity 3 73 0 21 0 0 0 chr10 120318369 120318390 -19998375 + AT_rich Low_complexity Low_complexity 1 21 0 317 187 151 50 chr10 120318403 120318542 -19998223 + L1MC4a LINE L1 5878 6030 -1778 194 226 38 19 chr10 120318842 120318895 -19997870 - L2 LINE L2 -12 3260 3207 4861 72 10 0 chr10 120319520 120320132 -19996633 - L1PA10 LINE L1 -61 6107 5490 2166 98 7 20 chr10 120321084 120321381 -19995384 - AluSx SINE Alu -19 293 1 253 186 0 0 chr10 120321421 120321464 -19995301 - MSTA LTR MaLR 0 428 386 1986 105 148 38 chr10 120321741 120322085 -19994680 - MSTA LTR MaLR -46 382 1 256 257 40 14 chr10 120322636 120322710 -19994055 + L2 LINE L2 3197 3272 0 1581 177 99 23 chr10 120323268 120323663 -19993102 + LTR37A LTR ERV1 2 426 0 408 252 89 24 chr10 120323777 120323900 -19992865 + MIR SINE MIR 16 146 -62 270 299 26 39 chr10 120324742 120324896 -19991869 + L1MC/D LINE L1 5574 5725 -2083 252 135 0 0 chr10 120325250 120325287 -19991478 + MADE1 DNA Mariner 1 37 -43 181 56 28 28 chr10 120325290 120325326 -19991439 + (TA)n Simple_repeat Simple_repeat 1 36 0 387 0 0 0 chr10 120325329 120325372 -19991393 + (TG)n Simple_repeat Simple_repeat 2 44 0 1573 183 4 11 chr10 120325373 120325647 -19991118 - AluJb SINE Alu -40 272 1 2373 145 50 40 chr10 120325879 120326156 -19990609 - MSTA LTR MaLR -4 424 140 1689 121 4 4 chr10 120326156 120326405 -19990360 + AluSx SINE Alu 56 304 -8 2373 145 50 40 chr10 120326405 120326547 -19990218 - MSTA LTR MaLR -288 140 1 919 280 99 40 chr10 120327076 120327276 -19989489 + L1ME3A LINE L1 4962 5149 -1021 1367 167 123 15 chr10 120327276 120327545 -19989220 + AluSg SINE Alu 1 298 -12 919 280 99 40 chr10 120327545 120328270 -19988495 + L1ME3A LINE L1 5149 5949 -221 180 77 0 0 chr10 120328572 120328598 -19988167 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 533 257 189 0 chr10 120328643 120328849 -19987916 - MIR SINE MIR -10 252 8 2241 127 0 0 chr10 120329718 120330025 -19986740 + AluSx SINE Alu 1 307 -5 2742 163 27 6 chr10 120330261 120330747 -19986018 - L1MB7 LINE L1 -17 6167 5672 2073 129 0 3 chr10 120330750 120331044 -19985721 - AluSx SINE Alu -19 293 1 255 61 0 0 chr10 120331045 120331078 -19985687 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 621 183 0 50 chr10 120331078 120331198 -19985567 - AluSg/x SINE Alu -26 283 170 254 154 0 0 chr10 120331202 120331241 -19985524 - AluSg/x SINE Alu -66 234 196 236 179 0 0 chr10 120331239 120331278 -19985487 - Alu SINE Alu -66 234 196 * 1865 87 0 0 chr10 120331278 120331507 -19985258 - AluSx SINE Alu -78 234 6 1537 138 20 8 chr10 120331516 120331769 -19984996 - L1MB7 LINE L1 -516 5668 5413 946 89 0 0 chr10 120331774 120331898 -19984867 - AluSg/x SINE Alu 0 312 189 1502 183 35 11 chr10 120331899 120332273 -19984492 - L1MB7 LINE L1 -743 5403 5039 233 308 55 22 chr10 120332687 120332778 -19983987 - L2 LINE L2 -527 2787 2694 2170 127 3 19 chr10 120333447 120333762 -19983003 - AluSx SINE Alu -2 310 1 361 276 88 75 chr10 120333783 120334077 -19982688 + L2 LINE L2 2607 2904 -410 220 306 41 71 chr10 120334656 120334754 -19982011 - L2 LINE L2 -32 3240 3146 2373 67 0 0 chr10 120335086 120335369 -19981396 - AluSc SINE Alu -26 283 1 1007 118 0 0 chr10 120336508 120336643 -19980122 + AluSq/x SINE Alu 1 135 -177 1534 199 58 0 chr10 120336643 120336935 -19979830 + AluSx SINE Alu 1 309 -3 279 151 116 47 chr10 120337489 120337575 -19979190 + L1MC5 LINE L1 7835 7926 -35 228 158 0 171 chr10 120337572 120337648 -19979117 + L1MB7 LINE L1 6095 6157 -27 * 2012 129 0 4 chr10 120337671 120337950 -19978815 - AluSx SINE Alu -33 279 2 182 216 0 59 chr10 120338002 120338053 -19978712 - MIR SINE MIR -129 133 86 230 158 158 18 chr10 120339003 120339060 -19977705 + HAL1b LINE L1 825 889 -459 1970 143 36 0 chr10 120340363 120340664 -19976101 + AluSx SINE Alu 1 312 0 2570 68 0 0 chr10 120340815 120341126 -19975639 - AluY SINE Alu 0 311 1 256 287 35 0 chr10 120341495 120341582 -19975183 + L1ME LINE L1 5772 5861 -260 631 182 25 50 chr10 120342185 120342248 -19974517 + MIR SINE MIR 102 165 -97 2039 138 20 0 chr10 120342248 120342545 -19974220 + AluSx SINE Alu 1 303 -9 631 182 25 50 chr10 120342545 120342640 -19974125 + MIR SINE MIR 165 256 -6 271 289 12 0 chr10 120343838 120343921 -19972844 + L2 LINE L2 2041 2124 -1190 329 198 99 27 chr10 120343921 120344098 -19972667 - MER5C DNA MER1_type 0 324 96 997 188 0 0 chr10 120344098 120344268 -19972497 + AluJb SINE Alu 134 303 -9 303 297 50 0 chr10 120344273 120344374 -19972391 - MER5C DNA MER1_type -215 109 4 495 298 75 48 chr10 120344416 120344816 -19971949 + L2 LINE L2 2223 2633 -681 183 182 0 0 chr10 120344797 120344830 -19971935 - MIR SINE MIR -228 34 2 * 2141 106 0 3 chr10 120344880 120345163 -19971602 + AluSx SINE Alu 1 282 -30 1771 114 110 0 chr10 120345189 120345452 -19971313 + AluSq SINE Alu 1 292 -21 5261 146 55 41 chr10 120345582 120346682 -19970083 - L1MA7 LINE L1 -11 6280 5163 2230 121 0 0 chr10 120347361 120347659 -19969106 + AluSx SINE Alu 3 300 -12 1892 139 0 49 chr10 120348250 120348574 -19968191 - AluJo SINE Alu -3 309 2 434 18 18 0 chr10 120349043 120349098 -19967667 + (CA)n Simple_repeat Simple_repeat 2 57 0 1052 214 131 60 chr10 120349216 120349771 -19966994 + L2 LINE L2 2724 3310 -3 39 22 0 0 chr10 120350898 120350944 -19965821 + AT_rich Low_complexity Low_complexity 1 46 0 2014 113 4 0 chr10 120351114 120351389 -19965376 + AluSc SINE Alu 32 307 -2 309 303 33 57 chr10 120351819 120351941 -19964824 - MIR SINE MIR -74 134 16 4038 62 2 0 chr10 120352038 120352520 -19964245 - L1PA10 LINE L1 0 6168 5686 516 254 116 0 chr10 120353009 120353198 -19963567 + L1MC4a LINE L1 5678 5888 -1920 183 42 0 0 chr10 120353443 120353467 -19963298 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2144 99 7 20 chr10 120353469 120353762 -19963003 - AluSx SINE Alu -23 289 1 2053 143 21 12 chr10 120354653 120354989 -19961776 + MER1B DNA MER1_type 1 339 0 270 73 0 0 chr10 120355677 120355718 -19961047 + (TG)n Simple_repeat Simple_repeat 2 42 0 252 345 47 8 chr10 120356027 120356262 -19960503 - L1M4 LINE L1 -1502 4644 4401 339 314 33 126 chr10 120356302 120356573 -19960192 + L2 LINE L2 2935 3180 -92 488 233 68 48 chr10 120356867 120357013 -19959752 + MIR SINE MIR 21 169 -93 1633 241 105 27 chr10 120357015 120357802 -19958963 + L2 LINE L2 2314 3150 -163 23 33 0 0 chr10 120358561 120358591 -19958174 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr10 120360017 120360056 -19956709 + (CA)n Simple_repeat Simple_repeat 1 39 0 316 286 42 71 chr10 120361164 120361332 -19955433 + L2 LINE L2 212 374 -2940 221 259 89 80 chr10 120361400 120361512 -19955253 + L2 LINE L2 2941 3053 -219 354 61 0 0 chr10 120361585 120361634 -19955131 + (TC)n Simple_repeat Simple_repeat 1 49 0 2235 90 3 3 chr10 120361648 120361938 -19954827 - AluY SINE Alu -21 290 1 257 361 227 0 chr10 120361956 120362075 -19954690 + L2 LINE L2 3127 3272 0 544 303 26 9 chr10 120362380 120362623 -19954142 - L1MC4a LINE L1 -534 5825 5652 30 27 0 0 chr10 120362934 120362971 -19953794 + AT_rich Low_complexity Low_complexity 1 37 0 1773 120 69 18 chr10 120363014 120363290 -19953475 - AluSg SINE Alu -20 290 1 387 305 28 23 chr10 120363385 120363562 -19953203 + MER5B DNA MER1_type 1 178 0 300 361 0 10 chr10 120363590 120363687 -19953078 - MER5A DNA MER1_type -54 135 40 1772 113 113 7 chr10 120363974 120364248 -19952517 - AluSg SINE Alu -7 303 1 2025 112 61 14 chr10 120364659 120364955 -19951810 - AluSg SINE Alu 0 310 1 710 244 105 13 chr10 120365638 120365876 -19950889 + MIR SINE MIR 3 262 0 22 0 0 0 chr10 120366794 120366816 -19949949 + AT_rich Low_complexity Low_complexity 1 22 0 26 82 0 0 chr10 120367749 120367810 -19948955 + GC_rich Low_complexity Low_complexity 1 61 0 1699 148 25 50 chr10 120368667 120368984 -19947781 + AluSx SINE Alu 1 309 -3 821 84 24 36 chr10 120369001 120369167 -19947598 + (GAAA)n Simple_repeat Simple_repeat 3 166 0 547 288 0 0 chr10 120369796 120369921 -19946844 - L2 LINE L2 0 3272 3148 193 390 53 5 chr10 120369934 120370121 -19946644 + L2 LINE L2 2804 2999 -273 2161 115 3 0 chr10 120370413 120370709 -19946056 - AluSx SINE Alu -15 297 1 733 283 57 72 chr10 120371814 120371907 -19944858 + L1MEd LINE L1 560 653 -5478 1886 146 0 20 chr10 120371907 120372201 -19944564 + AluJo SINE Alu 10 297 -15 733 283 57 72 chr10 120372201 120372909 -19943856 + L1MEd LINE L1 653 1240 -4891 2295 117 0 0 chr10 120373019 120373327 -19943438 + AluSx SINE Alu 1 308 -4 204 143 0 0 chr10 120373423 120373465 -19943300 + (TA)n Simple_repeat Simple_repeat 1 42 0 300 209 88 11 chr10 120373585 120373676 -19943089 + L1MEd LINE L1 3179 3276 -2853 1136 290 35 14 chr10 120373726 120374160 -19942605 + L1MEc LINE L1 36 478 -5918 2075 86 62 88 chr10 120374522 120374907 -19941858 - THE1C LTR MaLR 0 375 1 2264 105 0 0 chr10 120375912 120376207 -19940558 + AluSg SINE Alu 1 295 -15 1280 214 41 15 chr10 120376231 120376497 -19940268 - AluJo SINE Alu -39 273 1 799 281 83 33 chr10 120376504 120377135 -19939630 - L1MCc LINE L1 -4888 1535 1254 2011 156 0 0 chr10 120377661 120377962 -19938803 + AluJb SINE Alu 1 301 -11 330 26 0 0 chr10 120378148 120378187 -19938578 + (CA)n Simple_repeat Simple_repeat 2 40 0 667 260 187 5 chr10 120378743 120378962 -19937803 - MIR SINE MIR 0 262 4 689 294 33 52 chr10 120379076 120379532 -19937233 - L1MC4a LINE L1 -128 5993 5556 1357 141 62 30 chr10 120379864 120380300 -19936465 - LTR54 LTR ERV1 0 510 1 2091 148 0 0 chr10 120380791 120381096 -19935669 + AluJb SINE Alu 1 305 -7 593 232 0 12 chr10 120381096 120381260 -19935505 + (TATATG)n Simple_repeat Simple_repeat 5 166 0 1292 330 69 53 chr10 120381986 120382571 -19934194 - L2 LINE L2 -338 2976 2373 2170 103 26 19 chr10 120382571 120382847 -19933918 + AluSx SINE Alu 1 281 -31 207 0 0 0 chr10 120382847 120382870 -19933895 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2170 103 26 19 chr10 120382870 120382903 -19933862 + AluSx SINE Alu 281 312 0 1292 330 69 53 chr10 120382903 120383133 -19933632 - L2 LINE L2 -941 2373 2148 182 349 35 12 chr10 120383168 120383254 -19933511 - L2 LINE L2 -1256 2058 1971 726 204 74 19 chr10 120383258 120383420 -19933345 + MER63A DNA MER1_type 5 175 -35 444 279 122 31 chr10 120383454 120383637 -19933128 - L2 LINE L2 -1348 1966 1801 2205 96 0 0 chr10 120383637 120383948 -19932817 + AluSg SINE Alu 1 311 0 2326 99 3 6 chr10 120383950 120384263 -19932502 + AluSx SINE Alu 1 312 0 444 279 122 31 chr10 120384263 120384304 -19932461 - L2 LINE L2 -1513 1801 1717 188 358 42 21 chr10 120384319 120384414 -19932351 - MIR SINE MIR -147 115 19 25 0 0 0 chr10 120385216 120385241 -19931524 + AT_rich Low_complexity Low_complexity 1 25 0 2286 117 0 0 chr10 120385286 120385595 -19931170 - AluSx SINE Alu -3 309 1 354 265 126 27 chr10 120385698 120385921 -19930844 + L1 LINE L1 4178 4422 -1724 27 49 0 0 chr10 120386036 120386077 -19930688 + AT_rich Low_complexity Low_complexity 1 41 0 7896 21 0 245 chr10 120386265 120387808 -19928957 + SVA Other Other 233 1408 0 190 167 119 0 chr10 120387813 120387855 -19928910 - MIR SINE MIR -167 95 49 2213 108 0 0 chr10 120387887 120388206 -19928559 + AluSx SINE Alu 1 312 0 1043 134 32 16 chr10 120388213 120388399 -19928366 - MER53 DNA DNA 0 189 1 2358 110 0 0 chr10 120388416 120388726 -19928039 + AluSg SINE Alu 1 310 0 404 121 15 0 chr10 120388898 120388964 -19927801 - L1PA14 LINE L1 0 6161 6095 1992 100 46 7 chr10 120388964 120389229 -19927536 - L1P4 LINE L1 -606 5559 5279 2130 122 3 10 chr10 120389229 120389533 -19927232 - AluSx SINE Alu -10 302 1 1992 100 46 7 chr10 120389533 120389597 -19927168 - L1P4 LINE L1 -886 5279 5219 714 236 32 6 chr10 120389933 120390090 -19926675 - MER45A DNA AcHobo -7 171 11 186 43 0 0 chr10 120390507 120390530 -19926235 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 885 166 14 90 chr10 120390533 120390744 -19926021 - AluJo SINE Alu -31 281 87 2569 64 0 0 chr10 120390798 120391109 -19925656 + AluY SINE Alu 1 311 0 661 214 150 41 chr10 120391329 120391480 -19925285 - MIR SINE MIR 0 262 78 1859 173 0 0 chr10 120391480 120391775 -19924990 + AluJb SINE Alu 1 295 -17 661 214 150 41 chr10 120391775 120391843 -19924922 - MIR SINE MIR -184 78 19 818 256 143 14 chr10 120391963 120392256 -19924509 + L2 LINE L2 1990 2320 -994 2897 76 28 28 chr10 120392256 120392311 -19924454 + MSTA LTR MaLR 1 55 -373 2264 117 0 0 chr10 120392311 120392619 -19924146 + AluSx SINE Alu 1 308 -4 2897 76 28 28 chr10 120392619 120392960 -19923805 + MSTA LTR MaLR 54 397 -31 1169 288 19 11 chr10 120393004 120393375 -19923390 + LTR16B LTR ERVL 46 419 -45 765 290 78 25 chr10 120393376 120393884 -19922881 + L2 LINE L2 2628 3313 0 2192 122 0 7 chr10 120394866 120395170 -19921595 + AluSq SINE Alu 1 302 -11 513 224 46 59 chr10 120395494 120395588 -19921177 + MIR3 SINE MIR 23 116 -92 2328 198 97 28 chr10 120395588 120396093 -19920672 - MLT1F LTR MaLR -1 541 2 513 224 46 59 chr10 120396093 120396150 -19920615 + MIR3 SINE MIR 116 172 -36 * 914 334 109 27 chr10 120396144 120396934 -19919831 + L2 LINE L2 455 1309 -2005 572 188 172 0 chr10 120397094 120397222 -19919543 + MER33 DNA MER1_type 1 150 -174 23 0 0 0 chr10 120397549 120397572 -19919193 + AT_rich Low_complexity Low_complexity 1 23 0 2325 95 0 10 chr10 120397580 120397876 -19918889 + AluSx SINE Alu 1 293 -19 1907 140 3 32 chr10 120397891 120398199 -19918566 + AluJo SINE Alu 1 299 -13 2284 91 0 26 chr10 120398231 120398539 -19918226 - AluSc SINE Alu -9 300 1 2121 233 81 48 chr10 120398626 120399221 -19917544 + L2 LINE L2 2073 2696 -618 1755 162 3 17 chr10 120399221 120399517 -19917248 - AluJb SINE Alu -20 292 1 2121 233 81 48 chr10 120399517 120399613 -19917152 + L2 LINE L2 2696 2787 -527 671 261 14 21 chr10 120399645 120400021 -19916744 + MER20B DNA MER1_type 8 475 -308 * 1293 147 0 63 chr10 120400017 120400072 -19916693 - Tigger2a DNA MER2_type -2274 434 377 1966 150 16 3 chr10 120400072 120400378 -19916387 + AluSx SINE Alu 1 310 -2 1293 147 0 63 chr10 120400378 120400574 -19916191 - Tigger2a DNA MER2_type -2331 377 199 821 183 23 0 chr10 120400574 120400705 -19916060 + AluJo SINE Alu 2 135 -177 1232 162 29 5 chr10 120400712 120400916 -19915849 - Tigger2a DNA MER2_type -225 209 1 469 205 86 0 chr10 120401038 120401155 -19915610 + LTR50 LTR ERVL 28 154 -641 485 230 88 36 chr10 120401214 120401425 -19915340 + LTR50 LTR ERVL 296 594 -201 1691 147 49 46 chr10 120401495 120401801 -19914964 - AluSx SINE Alu -5 307 1 414 167 39 13 chr10 120401803 120401881 -19914884 + LTR50 LTR ERVL 713 792 -3 727 205 25 0 chr10 120402234 120402389 -19914376 - FLAM_A SINE Alu 0 158 1 2053 124 10 0 chr10 120402419 120402710 -19914055 + AluSq SINE Alu 1 294 -19 2141 88 0 4 chr10 120403030 120403304 -19913461 + AluY SINE Alu 2 274 -37 1491 18 0 12 chr10 120403304 120403472 -19913293 + L1PA4 LINE L1 5990 6155 0 6428 307 72 41 chr10 120403550 120405335 -19911430 + ERVL LTR ERVL 837 2752 -3012 1977 111 72 4 chr10 120405335 120405614 -19911151 - AluSx SINE Alu -14 298 1 6428 307 72 41 chr10 120405614 120406780 -19909985 + ERVL LTR ERVL 2752 3880 -1884 731 228 26 64 chr10 120406780 120406943 -19909822 + L1MC4 LINE L1 6854 7007 -1035 2112 126 0 28 chr10 120406943 120407260 -19909505 + AluSx SINE Alu 5 312 0 731 228 26 64 chr10 120407260 120407329 -19909436 + L1MC4 LINE L1 7007 7077 -965 1998 219 102 34 chr10 120407346 120407439 -19909326 + L1MC4 LINE L1 7289 7374 -668 1943 151 0 43 chr10 120407439 120407764 -19909001 + AluSq SINE Alu 1 311 -2 1998 219 102 34 chr10 120407764 120408128 -19908637 + L1MC4 LINE L1 7374 7795 -247 1584 229 135 35 chr10 120408128 120408587 -19908178 + MLT1D LTR MaLR 1 505 0 1998 219 102 34 chr10 120408587 120408694 -19908071 + L1MC4 LINE L1 7795 7893 -149 25 65 0 0 chr10 120408719 120408765 -19908000 + AT_rich Low_complexity Low_complexity 1 46 0 715 291 36 62 chr10 120409271 120409464 -19907301 + LTR40a LTR ERVL 181 365 -154 2522 123 25 40 chr10 120409464 120409676 -19907089 - MSTD LTR MaLR 0 396 191 2272 99 3 7 chr10 120409676 120409980 -19906785 - AluSx SINE Alu -9 303 1 2522 123 25 40 chr10 120409980 120410167 -19906598 - MSTD LTR MaLR -205 191 3 715 291 36 62 chr10 120410167 120410279 -19906486 + LTR40a LTR ERVL 365 478 -41 2850 185 83 50 chr10 120411014 120411656 -19905109 - MLT2F LTR ERVL 0 663 1 844 178 7 0 chr10 120412037 120412172 -19904593 + AluJo SINE Alu 1 136 -176 594 171 101 116 chr10 120412179 120412292 -19904473 - ERVL-F LTR ERVL -332 5432 5322 2516 77 3 6 chr10 120412292 120412605 -19904160 - AluSp SINE Alu -1 312 1 594 171 101 116 chr10 120412605 120412690 -19904075 - ERVL-F LTR ERVL -442 5322 5237 383 218 50 80 chr10 120412722 120412984 -19903781 + L1M4 LINE L1 2384 2637 -3509 389 61 41 184 chr10 120413009 120413055 -19903710 + L1ME3A LINE L1 5892 5919 -251 2014 140 0 0 chr10 120413055 120413371 -19903394 + AluSx SINE Alu 1 316 0 389 61 41 184 chr10 120413371 120413421 -19903344 + L1ME3A LINE L1 5919 5975 -195 24 32 0 0 chr10 120413448 120413479 -19903286 + AT_rich Low_complexity Low_complexity 1 31 0 1069 97 0 0 chr10 120413480 120413614 -19903151 + AluSq/x SINE Alu 1 134 -179 747 208 24 6 chr10 120413629 120413797 -19902968 + L1ME3A LINE L1 5963 6133 -37 867 278 142 23 chr10 120413866 120414254 -19902511 + L2 LINE L2 2804 3237 -76 725 309 73 15 chr10 120414282 120414872 -19901893 - L1M4 LINE L1 -3381 2765 2142 955 92 8 38 chr10 120414906 120415037 -19901728 - FLAM_C SINE Alu -5 128 2 743 243 120 70 chr10 120415141 120415541 -19901224 + MLT1J LTR MaLR 69 488 -23 2257 128 0 0 chr10 120415975 120416279 -19900486 + AluSg SINE Alu 7 310 0 2447 78 0 0 chr10 120416790 120417096 -19899669 + AluY SINE Alu 1 306 -5 1628 139 46 14 chr10 120417622 120417902 -19898863 - MER2 DNA MER2_type -55 290 2 723 226 98 47 chr10 120417903 120418137 -19898628 - HAL1 LINE L1 -2261 246 1 570 137 0 11 chr10 120418178 120418273 -19898492 - L1PA13 LINE L1 0 6163 6070 1613 88 10 13 chr10 120418273 120418566 -19898199 + L1P4 LINE L1 5197 5489 -679 719 250 142 0 chr10 120419562 120419766 -19896999 - MIR SINE MIR -25 237 5 558 215 0 0 chr10 120419815 120419945 -19896820 + (TG)n Simple_repeat Simple_repeat 2 131 0 2129 80 3 86 chr10 120419946 120420271 -19896494 - AluSq SINE Alu -13 300 3 32 26 0 0 chr10 120420650 120420689 -19896076 + AT_rich Low_complexity Low_complexity 1 39 0 31 99 0 0 chr10 120421105 120421206 -19895559 + GC_rich Low_complexity Low_complexity 1 101 0 22 80 0 0 chr10 120421306 120421356 -19895409 + GC_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr10 120421704 120421750 -19895015 + GC_rich Low_complexity Low_complexity 1 46 0 2129 94 3 14 chr10 120422929 120423244 -19893521 - AluSx SINE Alu 0 312 1 812 217 99 59 chr10 120423323 120423645 -19893120 - MER2 DNA MER2_type 0 345 11 1518 171 27 44 chr10 120424480 120424773 -19891992 - AluJb SINE Alu -24 288 1 748 260 55 9 chr10 120425755 120425974 -19890791 + MIR SINE MIR 34 262 0 2282 105 0 0 chr10 120426161 120426456 -19890309 + AluSq SINE Alu 4 298 -15 412 285 26 26 chr10 120426756 120426907 -19889858 - L2 LINE L2 0 3313 3163 2675 40 0 0 chr10 120426962 120427262 -19889503 + AluY SINE Alu 1 300 -11 1198 145 0 5 chr10 120428576 120428762 -19888003 - MER41B LTR ERV1 -111 524 340 * 2607 135 22 35 chr10 120428744 120429197 -19887568 - MER41B LTR ERV1 -188 447 1 2221 116 3 0 chr10 120429717 120430018 -19886747 - AluSx SINE Alu -10 302 1 1152 286 53 43 chr10 120430521 120430958 -19885807 - L2 LINE L2 -2 3311 2871 584 249 171 23 chr10 120431107 120431324 -19885441 - MIR SINE MIR -10 252 4 33 43 0 0 chr10 120431672 120431719 -19885046 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr10 120432007 120432033 -19884732 + AT_rich Low_complexity Low_complexity 1 26 0 2120 123 0 7 chr10 120432157 120432459 -19884306 - AluSx SINE Alu -12 300 1 248 310 141 33 chr10 120433367 120433551 -19883214 + MIR3 SINE MIR 2 205 -3 1012 219 0 0 chr10 120434242 120434434 -19882331 - MER8 DNA MER2_type 0 239 48 21 0 0 0 chr10 120435139 120435160 -19881605 + AT_rich Low_complexity Low_complexity 1 21 0 1882 166 3 10 chr10 120436336 120436649 -19880116 - AluJb SINE Alu -1 311 1 2072 136 0 0 chr10 120436678 120436973 -19879792 + AluSx SINE Alu 1 295 -17 2241 219 89 6 chr10 120436997 120437635 -19879130 - L1ME1 LINE L1 -1 6165 5475 320 336 75 41 chr10 120438402 120438548 -19878217 + L2 LINE L2 3122 3272 0 2175 124 10 0 chr10 120438566 120438872 -19877893 - AluSx SINE Alu -3 309 1 2313 102 0 13 chr10 120439042 120439356 -19877409 + AluY SINE Alu 1 310 -1 240 326 5 153 chr10 120439356 120439552 -19877213 - L2 LINE L2 -91 3181 3015 983 142 0 0 chr10 120439552 120439686 -19877079 + AluJo SINE Alu 1 134 -178 382 358 114 41 chr10 120439801 120440360 -19876405 - L2 LINE L2 -488 2826 2227 466 303 53 13 chr10 120440452 120440604 -19876161 - MER5A DNA MER1_type -31 158 1 2270 89 27 0 chr10 120440738 120441030 -19875735 - AluSx SINE Alu -12 300 1 1777 148 7 35 chr10 120441500 120441810 -19874955 - AluJb SINE Alu -11 301 1 2240 95 6 19 chr10 120442733 120443049 -19873716 - AluSx SINE Alu 0 312 1 2048 114 0 78 chr10 120444222 120444556 -19872209 - AluSx SINE Alu -4 308 1 21 0 0 0 chr10 120445416 120445437 -19871328 + AT_rich Low_complexity Low_complexity 1 21 0 1981 106 0 14 chr10 120446718 120447000 -19869765 - AluSx SINE Alu 0 312 35 1141 103 0 7 chr10 120447196 120447351 -19869414 - AluSg/x SINE Alu -16 294 141 309 133 0 0 chr10 120447352 120447397 -19869368 - Alu SINE Alu -257 51 7 2285 78 51 0 chr10 120448306 120448600 -19868165 + AluSx SINE Alu 1 309 -3 3986 188 51 33 chr10 120449053 120449869 -19866896 - L1MB5 LINE L1 -8 6166 5366 1741 171 34 14 chr10 120449869 120450161 -19866604 + AluJo SINE Alu 1 298 -14 3986 188 51 33 chr10 120450161 120450340 -19866425 - L1MB5 LINE L1 -808 5366 5192 201 39 0 0 chr10 120450340 120450366 -19866399 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2079 133 0 0 chr10 120450373 120450659 -19866106 - AluSx SINE Alu -26 286 1 3986 188 51 33 chr10 120450659 120451511 -19865254 - L1MB5 LINE L1 -987 5187 4274 320 385 29 32 chr10 120451776 120452116 -19864649 + L2 LINE L2 2308 2646 -668 1263 89 0 0 chr10 120453162 120453320 -19863445 + AluSx SINE Alu 1 158 -154 1500 134 48 51 chr10 120453558 120453656 -19863109 - MER5C DNA MER1_type -12 312 215 2362 95 3 0 chr10 120453656 120453952 -19862813 + AluSp SINE Alu 1 297 -16 1500 134 48 51 chr10 120453952 120454166 -19862599 - MER5C DNA MER1_type -109 215 1 1069 131 0 29 chr10 120456405 120456580 -19860185 + FAM SINE Alu 1 49 0 2212 121 3 0 chr10 120456725 120457055 -19859710 - AluSx SINE Alu 0 331 1 21 57 0 0 chr10 120458010 120458045 -19858720 + AT_rich Low_complexity Low_complexity 1 35 0 1494 136 31 31 chr10 120458173 120458467 -19858298 + L1MA4 LINE L1 6002 6295 -5 2357 87 3 0 chr10 120459798 120460097 -19856668 - AluSp SINE Alu -13 300 1 23 68 0 0 chr10 120460475 120460519 -19856246 + AT_rich Low_complexity Low_complexity 1 44 0 23 92 0 0 chr10 120461558 120461623 -19855142 + AT_rich Low_complexity Low_complexity 1 65 0 192 77 0 0 chr10 120463552 120463578 -19853187 + (TA)n Simple_repeat Simple_repeat 1 26 0 2303 108 0 0 chr10 120464438 120464733 -19852032 - AluSx SINE Alu -17 295 1 3131 71 38 2 chr10 120465413 120465836 -19850929 - L1PA10 LINE L1 0 6168 5731 239 313 60 0 chr10 120466020 120466087 -19850678 - L2 LINE L2 -1 3312 3242 2356 100 0 0 chr10 120466373 120466672 -19850093 + AluSx SINE Alu 2 300 -12 1256 117 92 0 chr10 120467387 120467583 -19849182 - AluJo SINE Alu -12 300 87 2018 120 55 19 chr10 120467621 120467946 -19848819 + MER1B DNA MER1_type 1 337 0 24 0 0 0 chr10 120468009 120468033 -19848732 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr10 120469816 120469844 -19846921 + AT_rich Low_complexity Low_complexity 1 28 0 244 264 172 0 chr10 120470299 120470386 -19846379 + LTR33A LTR ERVL 59 160 -363 370 177 31 8 chr10 120470465 120470595 -19846170 + (TA)n Simple_repeat Simple_repeat 2 134 0 957 171 0 24 chr10 120470609 120470779 -19845986 - AluJo SINE Alu -27 285 120 459 246 72 17 chr10 120470797 120471091 -19845674 + LTR50 LTR ERVL 289 512 -11 619 342 58 14 chr10 120471094 120471658 -19845107 - ERVL LTR ERVL -4290 1474 886 250 263 90 38 chr10 120471712 120471845 -19844920 - ERVL LTR ERVL -5111 653 514 488 265 88 8 chr10 120472339 120472594 -19844171 - LTR50 LTR ERVL 0 673 292 3302 172 36 40 chr10 120472600 120473344 -19843421 - L1MC3 LINE L1 -280 7505 6765 2262 95 0 3 chr10 120473945 120474249 -19842516 - AluSq SINE Alu -10 303 1 1858 152 7 7 chr10 120474857 120475282 -19841483 + AluSx SINE Alu 1 425 0 458 122 43 17 chr10 120475167 120475467 -19841298 + GA-rich Low_complexity Low_complexity 1 303 0 496 278 23 0 chr10 120475832 120475965 -19840800 + MIR SINE MIR 57 192 -70 29 0 0 0 chr10 120476903 120476932 -19839833 + AT_rich Low_complexity Low_complexity 1 29 0 441 270 26 26 chr10 120476933 120477085 -19839680 + MER5B DNA MER1_type 8 159 -19 300 325 32 0 chr10 120477587 120477710 -19839055 - L1ME4a LINE L1 -214 5907 5781 2353 94 13 3 chr10 120477946 120478255 -19838510 + AluSx SINE Alu 1 312 0 370 252 185 22 chr10 120478493 120478628 -19838137 - MIR SINE MIR -64 198 42 410 106 0 0 chr10 120479137 120479203 -19837562 - Alu SINE Alu -7 305 240 629 211 15 23 chr10 120479274 120479407 -19837358 - FLAM_A SINE Alu -1 132 1 1333 181 14 18 chr10 120479559 120479840 -19836925 + L1MB8 LINE L1 5898 6177 -1 1984 120 3 3 chr10 120479847 120480130 -19836635 + AluSx SINE Alu 1 283 -29 279 0 0 0 chr10 120480130 120480161 -19836604 + (CA)n Simple_repeat Simple_repeat 2 32 0 224 267 108 33 chr10 120480161 120480281 -19836484 - MER5A DNA MER1_type -58 131 3 279 304 12 42 chr10 120480854 120481000 -19835765 - MIR SINE MIR -67 141 44 267 203 0 0 chr10 120481368 120481432 -19835333 + (TG)n Simple_repeat Simple_repeat 1 64 0 2101 113 0 7 chr10 120482070 120482353 -19834412 + AluSx SINE Alu 31 311 -1 2072 120 11 3 chr10 120483018 120483329 -19833436 - AluSx SINE Alu 0 313 1 357 306 155 5 chr10 120483822 120484015 -19832750 + MIR SINE MIR 32 253 -9 2335 84 7 3 chr10 120484080 120484376 -19832389 + AluSx SINE Alu 1 297 -15 202 319 14 29 chr10 120484379 120484448 -19832317 + MIR SINE MIR 195 262 0 2267 123 0 0 chr10 120484562 120484872 -19831893 + AluSq SINE Alu 1 310 -3 825 262 19 5 chr10 120485570 120485784 -19830981 - MIR SINE MIR -21 241 25 24 0 0 0 chr10 120485815 120485839 -19830926 + AT_rich Low_complexity Low_complexity 1 24 0 2104 110 40 10 chr10 120485983 120486282 -19830483 - AluSx SINE Alu -4 308 1 420 214 0 11 chr10 120486302 120486391 -19830374 - AluYa5 SINE Alu -106 205 118 240 314 29 36 chr10 120486391 120486528 -19830237 - MIR3 SINE MIR -72 136 1 844 263 45 0 chr10 120486825 120487049 -19829716 - MIR SINE MIR -27 235 2 881 273 74 19 chr10 120487382 120487693 -19829072 + LTR33 LTR ERVL 100 427 -94 265 343 88 47 chr10 120487734 120488031 -19828734 - L2 LINE L2 -160 3112 2804 2238 128 0 0 chr10 120488040 120488352 -19828413 - AluSx SINE Alu 0 312 1 857 303 44 26 chr10 120488984 120489436 -19827329 - HERV16 LTR ERVL -3510 1486 1027 2250 116 3 0 chr10 120489476 120489777 -19826988 - AluSq SINE Alu -11 302 1 290 151 25 57 chr10 120489871 120490030 -19826735 + (TA)n Simple_repeat Simple_repeat 1 154 0 317 135 24 88 chr10 120490044 120490214 -19826551 + (TA)n Simple_repeat Simple_repeat 2 160 0 799 204 82 53 chr10 120490214 120490362 -19826403 + L1MC5 LINE L1 7574 7716 -245 1584 157 32 29 chr10 120490362 120490669 -19826096 + AluJo SINE Alu 1 308 0 219 69 0 0 chr10 120490669 120490698 -19826067 + (TA)n Simple_repeat Simple_repeat 2 30 0 799 204 82 53 chr10 120490698 120490864 -19825901 + L1MC5 LINE L1 7715 7900 -61 504 117 0 0 chr10 120490987 120491064 -19825701 + (TG)n Simple_repeat Simple_repeat 2 78 0 2122 123 3 0 chr10 120491073 120491365 -19825400 - AluSx SINE Alu -19 293 1 284 270 38 43 chr10 120491629 120491814 -19824951 + L1ME4a LINE L1 5543 5726 -395 1904 116 32 0 chr10 120491814 120492140 -19824625 + AluSx SINE Alu 1 335 0 273 276 96 55 chr10 120492170 120492536 -19824229 + L1ME4a LINE L1 5739 6119 -2 583 255 37 6 chr10 120492543 120492704 -19824061 + L1ME4a LINE L1 5618 5783 -338 314 114 0 0 chr10 120493082 120493126 -19823639 + MER110A LTR ERV1 423 466 -2 230 148 19 0 chr10 120493135 120493189 -19823576 + (TG)n Simple_repeat Simple_repeat 2 56 0 320 218 30 68 chr10 120493216 120493349 -19823416 + L1ME4a LINE L1 5783 5910 -211 514 209 97 0 chr10 120493360 120493494 -19823271 + L1ME4a LINE L1 5967 6113 -8 1918 125 0 34 chr10 120493726 120494021 -19822744 + AluJb SINE Alu 1 285 -27 195 297 99 20 chr10 120494730 120494831 -19821934 + L2 LINE L2 1395 1503 -1811 310 325 43 31 chr10 120495013 120495176 -19821589 - MIR SINE MIR -51 211 47 302 366 8 8 chr10 120495231 120495367 -19821398 + MIR SINE MIR 15 149 -67 323 114 14 57 chr10 120495368 120495438 -19821327 + LTR41 LTR ERVL 1 67 -706 1422 259 57 82 chr10 120495445 120495874 -19820891 + ERVL LTR ERVL 4955 5393 -371 2031 289 143 54 chr10 120495874 120496484 -19820281 + MER4A LTR ERV1 1 664 0 1422 259 57 82 chr10 120496484 120496523 -19820242 + ERVL LTR ERVL 5393 5431 -333 4854 52 19 7 chr10 120496523 120497103 -19819662 + LTR10C LTR ERV1 1 587 -4 1422 259 57 82 chr10 120497103 120497247 -19819518 + ERVL LTR ERVL 5431 5577 -187 1725 169 24 0 chr10 120497247 120497537 -19819228 + AluJb SINE Alu 1 297 -15 1422 259 57 82 chr10 120497537 120497744 -19819021 + ERVL LTR ERVL 5577 5756 -8 492 283 51 17 chr10 120497745 120497922 -19818843 + LTR41 LTR ERVL 2 184 -589 335 172 8 127 chr10 120498212 120498346 -19818419 + LTR41 LTR ERVL 650 767 -6 252 241 0 17 chr10 120498373 120498431 -19818334 + MIR SINE MIR 160 216 -46 300 250 52 26 chr10 120498628 120498857 -19817908 + MLT1H LTR MaLR 238 557 -10 796 272 87 18 chr10 120498909 120499185 -19817580 - MLT1K LTR MaLR -2 586 292 336 304 161 24 chr10 120499216 120499384 -19817381 - MLT1K LTR MaLR -356 232 42 732 295 134 9 chr10 120499741 120500070 -19816695 + MLT1K LTR MaLR 109 478 -110 1997 199 150 5 chr10 120501088 120501529 -19815236 - MLT1D LTR MaLR 0 505 1 189 0 0 0 chr10 120501538 120501559 -19815206 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 197 156 0 47 chr10 120502510 120502574 -19814191 + T-rich Low_complexity Low_complexity 1 61 0 2052 145 0 16 chr10 120503041 120503358 -19813407 + AluJb SINE Alu 1 312 0 25 0 0 0 chr10 120503886 120503911 -19812854 + AT_rich Low_complexity Low_complexity 1 25 0 501 295 55 76 chr10 120504061 120504301 -19812464 + L2 LINE L2 2842 3073 -240 2785 134 16 12 chr10 120504301 120504725 -19812040 - MSTB LTR MaLR 0 426 1 501 295 55 76 chr10 120504725 120504864 -19811901 + L2 LINE L2 3073 3213 -100 190 139 0 0 chr10 120504958 120504994 -19811771 + L2 LINE L2 3277 3312 -1 1834 214 82 25 chr10 120507068 120507508 -19809257 + MLT1C LTR MaLR 3 467 0 948 131 7 4 chr10 120507662 120507927 -19808838 - MLT1A1 LTR MaLR 0 365 1 2281 107 0 0 chr10 120508045 120508343 -19808422 + AluSq SINE Alu 1 298 -15 1097 297 125 19 chr10 120508627 120509478 -19807287 + L2 LINE L2 2369 3313 0 2157 132 0 3 chr10 120509890 120510201 -19806564 - AluSg SINE Alu 0 310 1 1921 145 3 17 chr10 120510282 120510578 -19806187 - AluSx SINE Alu -20 292 1 673 185 252 0 chr10 120510757 120510908 -19805857 + MER5A DNA MER1_type 1 189 0 351 265 51 17 chr10 120511398 120511515 -19805250 - MIR SINE MIR -65 143 23 287 260 93 47 chr10 120511605 120511637 -19805128 + MER91A DNA MER1_type 3 32 -164 3343 149 20 13 chr10 120511637 120512175 -19804590 + MER34 LTR ERV1 1 542 0 287 260 93 47 chr10 120512175 120512292 -19804473 + MER91A DNA MER1_type 32 159 -37 279 324 0 0 chr10 120512275 120512346 -19804419 + MER5B DNA MER1_type 39 109 -69 * 183 80 0 0 chr10 120512366 120512391 -19804374 + (TG)n Simple_repeat Simple_repeat 2 26 0 218 0 94 0 chr10 120512417 120512449 -19804316 + T-rich Low_complexity Low_complexity 1 35 0 1651 121 15 59 chr10 120512456 120512592 -19804173 - AluSq SINE Alu -53 260 140 2149 101 42 23 chr10 120512592 120512898 -19803867 - AluSx SINE Alu 0 312 1 1651 121 15 59 chr10 120512898 120513033 -19803732 - AluSq SINE Alu -173 140 1 1093 154 19 0 chr10 120513042 120513204 -19803561 - FAM SINE Alu -10 165 1 343 161 0 0 chr10 120513215 120513271 -19803494 + MER5B DNA MER1_type 123 178 0 938 176 57 0 chr10 120515481 120515657 -19801108 - MER20 DNA MER1_type 0 219 34 195 364 15 15 chr10 120516162 120516228 -19800537 + MIR SINE MIR 2 67 -195 1382 153 8 25 chr10 120516345 120516581 -19800184 - LTR18B LTR ERVL -382 232 1 329 309 46 46 chr10 120516684 120516836 -19799929 - MLT1J LTR MaLR -148 363 212 21 0 0 0 chr10 120517686 120517707 -19799058 + AT_rich Low_complexity Low_complexity 1 21 0 515 275 185 22 chr10 120518061 120518538 -19798227 + MLT1L LTR MaLR 39 610 -5 541 256 173 94 chr10 120518555 120519013 -19797752 + MLT1J LTR MaLR 12 505 -6 405 0 0 0 chr10 120519369 120519414 -19797351 + (TG)n Simple_repeat Simple_repeat 2 46 0 2250 126 0 0 chr10 120519668 120519977 -19796788 + AluSg SINE Alu 1 309 -1 273 269 62 39 chr10 120520211 120520341 -19796424 - MER5B DNA MER1_type -41 137 5 2254 86 3 10 chr10 120520582 120520874 -19795891 + AluSq SINE Alu 1 290 -23 232 30 0 0 chr10 120521129 120521162 -19795603 + L1MA5 LINE L1 6092 6124 -176 304 141 0 31 chr10 120521173 120521285 -19795480 + L1MA5 LINE L1 6237 6346 0 2069 135 3 0 chr10 120522776 120523072 -19793693 - AluSx SINE Alu -7 305 9 248 269 15 0 chr10 120523556 120523623 -19793142 + T-rich Low_complexity Low_complexity 3 70 0 538 315 123 0 chr10 120523764 120523967 -19792798 - MIR SINE MIR -12 250 23 757 236 95 46 chr10 120524158 120524333 -19792432 + MER5C DNA MER1_type 4 202 -122 1652 178 0 41 chr10 120524333 120524648 -19792117 - AluJb SINE Alu -10 302 1 757 236 95 46 chr10 120524648 120524777 -19791988 + MER5C DNA MER1_type 202 323 -1 2199 133 0 3 chr10 120526281 120526597 -19790168 - MER47A DNA MER2_type 0 366 52 219 36 0 0 chr10 120526618 120526646 -19790119 + (TA)n Simple_repeat Simple_repeat 2 29 0 248 293 49 16 chr10 120526955 120527078 -19789687 - L1ME LINE L1 -214 5907 5781 2452 82 0 3 chr10 120527314 120527620 -19789145 + AluSq SINE Alu 1 305 -8 3913 153 23 9 chr10 120527621 120528460 -19788305 + L1M2 LINE L1 4636 5484 -744 762 97 0 0 chr10 120528464 120528557 -19788208 + AluS SINE Alu 7 99 -213 1081 163 10 25 chr10 120528559 120528668 -19788097 + L1M2 LINE L1 5380 5489 -811 2067 120 4 0 chr10 120528668 120528943 -19787822 + AluSx SINE Alu 7 282 -30 194 0 39 0 chr10 120528951 120528977 -19787788 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1081 163 10 25 chr10 120528977 120529061 -19787704 + L1M2 LINE L1 5496 5579 -721 971 125 13 0 chr10 120529058 120529210 -19787555 - L1 LINE L1 -1138 5008 4855 * 1072 145 0 6 chr10 120529213 120529379 -19787386 + L1M2 LINE L1 5587 5751 -549 24 32 0 0 chr10 120529726 120529757 -19787008 + GC_rich Low_complexity Low_complexity 1 31 0 326 348 15 22 chr10 120531623 120531758 -19785007 - MIR3 SINE MIR -18 190 57 1958 117 46 39 chr10 120532039 120532346 -19784419 - AluSx SINE Alu -3 309 1 2337 72 3 7 chr10 120532357 120532650 -19784115 - AluSp SINE Alu -21 292 1 1755 72 0 5 chr10 120532756 120532978 -19783787 - AluY SINE Alu -8 303 83 4568 228 35 23 chr10 120533070 120534198 -19782567 + MLT-int LTR MaLR 594 1735 0 294 209 90 0 chr10 120534200 120534267 -19782498 + MSTB LTR MaLR 3 75 -353 2422 92 3 0 chr10 120535874 120536180 -19780585 - AluSp SINE Alu -6 307 1 196 252 44 118 chr10 120536285 120536420 -19780345 + L2 LINE L2 3030 3154 -159 771 139 0 0 chr10 120536424 120536546 -19780219 + MSTB LTR MaLR 5 126 -300 * 2068 150 33 11 chr10 120536544 120536910 -19779855 + MSTB LTR MaLR 52 425 -1 544 214 65 83 chr10 120536911 120537052 -19779713 + L2 LINE L2 3149 3289 -24 2187 93 3 21 chr10 120537052 120537370 -19779395 - AluSq SINE Alu 0 313 1 544 214 65 83 chr10 120537370 120537395 -19779370 + L2 LINE L2 3289 3313 0 241 61 0 0 chr10 120537419 120537452 -19779313 + MLT2A1 LTR ERVL 1 33 -411 1999 113 46 3 chr10 120537615 120537941 -19778824 + L1PA16 LINE L1 5825 6164 -2 2490 76 0 3 chr10 120538013 120538317 -19778448 - AluSp SINE Alu -10 303 1 2289 102 0 3 chr10 120538712 120539006 -19777759 - AluSq SINE Alu -20 293 1 551 174 113 9 chr10 120539980 120540095 -19776670 + AluSc SINE Alu 107 233 -76 2456 89 0 0 chr10 120540240 120540543 -19776222 + AluSx SINE Alu 1 303 -9 338 248 184 14 chr10 120540633 120540774 -19775991 - L2 LINE L2 -3 3310 3146 1760 141 35 3 chr10 120540902 120541192 -19775573 + AluJb SINE Alu 1 299 -13 185 274 32 0 chr10 120541749 120541811 -19774954 - MIR SINE MIR 0 262 199 383 256 37 43 chr10 120542451 120542504 -19774261 - MER112 DNA MER1_type -96 164 112 1957 154 136 5 chr10 120542504 120542880 -19773885 + MSTB LTR MaLR 2 426 0 383 256 37 43 chr10 120542880 120542990 -19773775 - MER112 DNA MER1_type -148 112 2 190 212 0 0 chr10 120542991 120543024 -19773741 + MIR3 SINE MIR 153 185 -23 24 85 0 0 chr10 120543024 120543083 -19773682 + AT_rich Low_complexity Low_complexity 1 59 0 308 215 141 33 chr10 120543531 120543652 -19773113 - L1ME4a LINE L1 -2 6119 5986 231 36 0 0 chr10 120543953 120543981 -19772784 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 465 66 0 0 chr10 120543993 120544054 -19772711 + (CCTA)n Simple_repeat Simple_repeat 2 62 0 1935 133 3 20 chr10 120544063 120544356 -19772409 - AluSx SINE Alu -24 288 1 201 200 95 42 chr10 120544376 120544471 -19772294 + MER5C DNA MER1_type 25 124 -200 211 167 125 125 chr10 120544478 120544574 -19772191 + MER5C DNA MER1_type 226 321 -3 816 225 116 25 chr10 120544708 120544984 -19771781 + L1ME3A LINE L1 5842 6142 -28 2212 114 0 25 chr10 120545107 120545424 -19771341 + AluSx SINE Alu 1 309 -3 337 245 65 7 chr10 120545454 120545593 -19771172 + L1MEd LINE L1 964 1110 -5009 378 396 0 7 chr10 120545732 120545881 -19770884 - MIR3 SINE MIR -6 202 55 239 311 50 0 chr10 120547278 120547397 -19769368 + L1ME LINE L1 5536 5660 -461 223 302 246 16 chr10 120549933 120550059 -19766706 - MIR SINE MIR -71 191 37 207 0 0 0 chr10 120550945 120550968 -19765797 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 23 68 0 0 chr10 120553213 120553257 -19763508 + AT_rich Low_complexity Low_complexity 1 44 0 1696 165 47 15 chr10 120553523 120553863 -19762902 + MLT1A1 LTR MaLR 4 354 -11 379 109 0 0 chr10 120555302 120555357 -19761408 + U6 snRNA snRNA 52 106 -1 2158 126 3 3 chr10 120555358 120555668 -19761097 - AluSx SINE Alu -2 310 1 21 0 0 0 chr10 120555675 120555696 -19761069 + AT_rich Low_complexity Low_complexity 1 21 0 299 289 13 0 chr10 120556851 120556927 -19759838 - L3 LINE CR1 -3 1574 1498 520 319 148 16 chr10 120557408 120557915 -19758850 + L1ME3 LINE L1 49 622 -5774 2083 200 101 30 chr10 120557952 120558663 -19758102 + L1M4 LINE L1 4238 4999 -1147 349 250 66 20 chr10 120558670 120558822 -19757943 + L1MA10 LINE L1 6175 6333 -1 1166 259 101 23 chr10 120558940 120559585 -19757180 + L1ME3 LINE L1 3395 4089 -2126 2470 74 3 16 chr10 120559589 120559901 -19756864 + AluY SINE Alu 1 308 -3 321 294 34 8 chr10 120559906 120560025 -19756740 + L1ME3 LINE L1 4765 4886 -1329 565 246 62 31 chr10 120560149 120560409 -19756356 + L1ME3 LINE L1 5080 5347 -868 1413 205 104 123 chr10 120560444 120561281 -19755484 + L1ME3 LINE L1 5339 6141 -90 544 271 115 92 chr10 120561331 120561932 -19754833 - L1M2 LINE L1 -5788 1061 447 495 281 6 36 chr10 120562766 120562933 -19753832 - MER20B DNA MER1_type -559 224 63 1320 144 0 0 chr10 120563229 120563417 -19753348 + AluSg/x SINE Alu 69 256 -56 633 220 87 23 chr10 120563423 120563641 -19753124 + MER20B DNA MER1_type 546 777 -6 372 318 61 57 chr10 120564068 120564348 -19752417 + L2 LINE L2 2396 2676 -638 * 521 286 40 29 chr10 120564335 120564510 -19752255 - MIR SINE MIR -72 190 14 24 0 0 0 chr10 120564756 120564780 -19751985 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 120566202 120566224 -19750541 + AT_rich Low_complexity Low_complexity 1 22 0 2122 66 11 25 chr10 120566358 120566669 -19750096 - AluSq SINE Alu 0 307 1 193 167 0 93 chr10 120566981 120567035 -19749730 + MER5C DNA MER1_type 226 274 -50 622 304 32 29 chr10 120568733 120568818 -19747947 - MIR SINE MIR -12 250 167 2390 96 3 0 chr10 120568818 120569119 -19747646 + AluSp SINE Alu 1 302 -11 622 304 32 29 chr10 120569119 120569276 -19747489 - MIR SINE MIR -95 167 17 227 316 61 10 chr10 120570269 120570367 -19746398 - MIR3 SINE MIR -7 201 99 190 325 57 64 chr10 120570664 120570821 -19745944 - L2 LINE L2 -223 3049 2894 605 270 106 19 chr10 120571172 120571550 -19745215 + L1ME4a LINE L1 5677 6087 -34 1924 168 37 97 chr10 120571628 120572164 -19744601 - MLT1D LTR MaLR 0 505 2 207 0 0 0 chr10 120572336 120572359 -19744406 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 376 234 142 21 chr10 120572839 120572980 -19743785 - MIR SINE MIR -102 160 3 23 0 0 0 chr10 120573155 120573178 -19743587 + AT_rich Low_complexity Low_complexity 1 23 0 2196 101 6 22 chr10 120573634 120573950 -19742815 + AluSq SINE Alu 1 311 -2 1396 120 51 0 chr10 120574493 120574710 -19742055 + MER30 DNA MER1_type 1 228 -2 249 278 11 11 chr10 120574893 120574983 -19741782 + MER117 DNA MER1_type 2 91 -106 778 294 26 13 chr10 120575064 120575292 -19741473 + MIR SINE MIR 32 262 0 1669 182 0 0 chr10 120575326 120575579 -19741186 - AluJb SINE Alu -59 253 1 1702 113 0 4 chr10 120575592 120575830 -19740935 - AluSq SINE Alu -1 312 76 243 178 123 0 chr10 120576034 120576107 -19740658 - MER112 DNA MER1_type -90 170 89 198 0 0 0 chr10 120576259 120576281 -19740484 + (A)n Simple_repeat Simple_repeat 1 22 0 1466 190 138 83 chr10 120576471 120576728 -19740037 - MER68 LTR ERV1 -2 560 318 243 0 0 0 chr10 120576728 120576755 -19740010 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 2041 92 11 4 chr10 120576759 120577030 -19739735 - AluSg SINE Alu -37 273 1 1466 190 138 83 chr10 120577030 120577298 -19739467 - MER68 LTR ERV1 -246 316 1 2536 69 0 0 chr10 120578254 120578560 -19738205 + AluY SINE Alu 1 306 -5 1817 164 0 30 chr10 120578695 120579000 -19737765 + AluJb SINE Alu 1 296 -16 2371 88 3 0 chr10 120579917 120580222 -19736543 + AluSp SINE Alu 1 306 -7 183 80 0 0 chr10 120580495 120580520 -19736245 + (A)n Simple_repeat Simple_repeat 1 25 0 189 350 82 10 chr10 120580943 120581040 -19735725 + L2 LINE L2 3149 3252 -20 334 332 11 26 chr10 120581186 120581376 -19735389 + MER5A DNA MER1_type 2 188 -1 292 295 116 11 chr10 120582392 120582487 -19734278 + L2 LINE L2 3195 3299 -14 2423 92 3 0 chr10 120583918 120584224 -19732541 - AluSp SINE Alu -6 307 1 181 259 44 118 chr10 120584329 120584464 -19732301 + L2 LINE L2 3030 3154 -159 813 148 0 0 chr10 120584468 120584590 -19732175 + MSTB LTR MaLR 5 126 -300 497 146 0 22 chr10 120584574 120584663 -19732102 + MSTA LTR MaLR 41 127 -301 * 471 157 0 22 chr10 120584647 120584736 -19732029 + MSTA LTR MaLR 41 127 -301 * 471 157 0 22 chr10 120584720 120584809 -19731956 + MSTA LTR MaLR 41 127 -301 445 169 0 22 chr10 120584793 120584882 -19731883 + MSTA LTR MaLR 41 127 -301 * 445 169 0 22 chr10 120584866 120584955 -19731810 + MSTB LTR MaLR 41 127 -301 420 183 42 21 chr10 120584939 120585040 -19731725 + MSTA LTR MaLR 41 151 -214 * 1942 157 39 12 chr10 120585062 120585393 -19731372 + MSTB LTR MaLR 86 425 -1 531 214 65 83 chr10 120585394 120585535 -19731230 + L2 LINE L2 3149 3289 -24 2231 92 0 20 chr10 120585535 120585854 -19730911 - AluSq SINE Alu 0 313 1 531 214 65 83 chr10 120585854 120585879 -19730886 + L2 LINE L2 3289 3313 0 1943 180 48 27 chr10 120585903 120586441 -19730324 + MLT2A2 LTR ERVL 1 554 0 192 209 164 0 chr10 120586539 120586606 -19730159 - MIR SINE MIR -112 150 73 355 265 0 31 chr10 120587925 120588023 -19728742 - MIR SINE MIR -93 169 75 1871 203 63 16 chr10 120588036 120588540 -19728225 - MER77 LTR ERV1 0 605 21 1824 201 68 100 chr10 120588540 120589112 -19727653 - MLT2B3 LTR ERVL 0 554 1 1871 203 63 16 chr10 120589112 120589135 -19727630 - MER77 LTR ERV1 -584 21 1 2098 119 7 0 chr10 120589366 120589659 -19727106 + AluSq SINE Alu 1 295 -18 216 254 191 0 chr10 120589702 120589765 -19727000 - L2 LINE L2 -2 3311 3237 1128 288 50 87 chr10 120589849 120590554 -19726211 + L3 LINE CR1 345 1023 -554 2132 107 7 7 chr10 120590671 120590961 -19725804 + AluSg SINE Alu 1 290 -20 365 396 0 7 chr10 120592087 120592236 -19724529 + MIR3 SINE MIR 55 202 -6 415 262 147 48 chr10 120592255 120592544 -19724221 - L1MEd LINE L1 -4862 1257 913 2128 123 0 25 chr10 120592544 120592860 -19723905 - AluSx SINE Alu -4 308 1 415 262 147 48 chr10 120592860 120592986 -19723779 - L1MEd LINE L1 -5206 913 801 * 936 225 116 25 chr10 120592983 120593259 -19723506 - L1ME3A LINE L1 -28 6142 5842 1112 221 65 37 chr10 120593262 120593556 -19723209 - MLT1A2 LTR MaLR 0 374 73 872 275 101 29 chr10 120593556 120593720 -19723045 - L1ME3A LINE L1 -347 5823 5672 2336 115 0 6 chr10 120593720 120594034 -19722731 - AluSx SINE Alu 0 312 1 872 275 101 29 chr10 120594034 120594255 -19722510 - L1ME3A LINE L1 -498 5672 5410 610 226 57 77 chr10 120594323 120594571 -19722194 - L1MEd LINE L1 -5294 825 583 623 276 58 87 chr10 120594649 120595029 -19721736 - L1MEd LINE L1 -5679 440 72 261 170 21 0 chr10 120595015 120595062 -19721703 - L1ME1 LINE L1 -19 6147 6100 * 2556 234 51 52 chr10 120595066 120595557 -19721208 - L1MCc LINE L1 -3037 3904 3414 186 43 0 0 chr10 120595557 120595580 -19721185 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2556 234 51 52 chr10 120595580 120595674 -19721091 - L1MCc LINE L1 -3527 3414 3321 2185 125 3 10 chr10 120595674 120595987 -19720778 - AluSx SINE Alu -1 311 1 2556 234 51 52 chr10 120595987 120596690 -19720075 - L1MCc LINE L1 -3620 3321 2646 296 79 0 0 chr10 120596730 120596768 -19719997 - MER58B DNA MER1_type -2 339 302 13315 104 19 18 chr10 120596768 120598724 -19718041 - Tigger1 DNA MER2_type 0 2418 461 754 233 55 7 chr10 120598740 120598886 -19717879 + AluSg/x SINE Alu 139 291 -21 2942 156 8 4 chr10 120598886 120599354 -19717411 - Tigger1 DNA MER2_type -1948 470 1 631 161 0 124 chr10 120599354 120599453 -19717312 - MER58B DNA MER1_type -2117 303 224 1995 117 21 0 chr10 120599453 120599735 -19717030 + AluSx SINE Alu 21 308 -4 631 161 0 124 chr10 120599735 120599771 -19716994 - MER58B DNA MER1_type -2196 224 185 1732 250 124 69 chr10 120599814 120600706 -19716059 - L1MCc LINE L1 -4459 2482 1641 2237 121 0 6 chr10 120600706 120601020 -19715745 - AluSx SINE Alu 0 312 1 1732 250 124 69 chr10 120601020 120601793 -19714972 - L1MCc LINE L1 -5300 1641 649 716 208 65 12 chr10 120601897 120602065 -19714700 - L1MCc LINE L1 -5981 442 266 2418 92 0 0 chr10 120602073 120602379 -19714386 - AluSg SINE Alu -4 306 1 1508 198 61 32 chr10 120602402 120602768 -19713997 + MLT2B1 LTR ERVL 1 374 -40 432 0 0 0 chr10 120602768 120602816 -19713949 + (CA)n Simple_repeat Simple_repeat 2 49 0 1508 198 61 32 chr10 120602816 120602859 -19713906 + MLT2B1 LTR ERVL 374 414 0 439 194 83 15 chr10 120602859 120603051 -19713714 - L1MCc LINE L1 -6159 264 25 199 296 0 0 chr10 120603261 120603305 -19713460 - MIR SINE MIR -115 147 104 216 276 29 57 chr10 120603977 120604082 -19712683 - L2 LINE L2 -607 2707 2606 526 332 30 20 chr10 120604493 120604695 -19712070 + MIR SINE MIR 45 248 -14 1862 136 42 14 chr10 120605009 120605295 -19711470 - AluJb SINE Alu -18 294 1 279 269 85 57 chr10 120605310 120605451 -19711314 - MIR SINE MIR -56 206 62 408 348 122 17 chr10 120605675 120606037 -19710728 + L3 LINE CR1 1052 1451 -126 521 186 60 48 chr10 120606083 120606250 -19710515 + L1MC5 LINE L1 7625 7793 -168 199 242 0 33 chr10 120606250 120606341 -19710424 + GA-rich Low_complexity Low_complexity 4 91 0 1023 167 6 25 chr10 120606345 120606507 -19710258 + FRAM SINE Alu 1 159 -7 2254 103 6 6 chr10 120607058 120607369 -19709396 - AluSx SINE Alu -1 311 1 325 309 12 48 chr10 120607719 120607887 -19708878 + L3 LINE CR1 1296 1457 -120 222 327 83 77 chr10 120608133 120608166 -19708599 + L2 LINE L2 3077 3108 -164 1866 159 0 3 chr10 120608166 120608483 -19708282 - AluJb SINE Alu 0 316 1 222 327 83 77 chr10 120608483 120608604 -19708161 + L2 LINE L2 3108 3233 -39 304 203 93 102 chr10 120610077 120610116 -19706649 + MER94 DNA DNA 1 39 -95 2216 100 10 0 chr10 120610116 120610406 -19706359 - AluSq SINE Alu -20 293 1 304 203 93 102 chr10 120610406 120610484 -19706281 + MER94 DNA DNA 39 117 -17 350 277 7 66 chr10 120611323 120611460 -19705305 + L1MC4 LINE L1 6575 6703 -1339 690 213 4 0 chr10 120611462 120611919 -19704846 + (TA)n Simple_repeat Simple_repeat 1 459 0 320 266 156 0 chr10 120612191 120612319 -19704446 + L2 LINE L2 2544 2691 -623 * 445 295 204 54 chr10 120612316 120612781 -19703984 - L2 LINE L2 -907 2407 1873 826 288 99 4 chr10 120612845 120613078 -19703687 - MIR SINE MIR 0 262 8 23 0 0 0 chr10 120613102 120613125 -19703640 + AT_rich Low_complexity Low_complexity 1 23 0 2049 128 10 0 chr10 120613290 120613732 -19703033 + AluSx SINE Alu 14 458 0 195 304 0 0 chr10 120613835 120613891 -19702874 + MIR SINE MIR 193 248 -14 2150 107 20 10 chr10 120616033 120616332 -19700433 - AluSx SINE Alu -10 302 1 827 103 34 22 chr10 120617536 120617760 -19699005 + CT-rich Low_complexity Low_complexity 1 226 0 409 129 0 0 chr10 120617761 120617823 -19698942 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 261 330 35 25 chr10 120618579 120618776 -19697989 + L1M4 LINE L1 4730 4928 -1218 1886 133 7 17 chr10 120618817 120619118 -19697647 - AluJb SINE Alu -13 299 2 22 35 0 0 chr10 120619278 120619307 -19697458 + AT_rich Low_complexity Low_complexity 1 29 0 1004 232 68 0 chr10 120620058 120620295 -19696470 - MIR SINE MIR -3 259 7 1556 127 15 109 chr10 120620587 120620742 -19696023 - L1MC3 LINE L1 0 7785 7678 2165 115 3 3 chr10 120620742 120621047 -19695718 + AluSx SINE Alu 1 305 -7 1556 127 15 109 chr10 120621047 120621230 -19695535 - L1MC3 LINE L1 -107 7678 7479 489 329 119 41 chr10 120621606 120621775 -19694990 + L2 LINE L2 1618 1772 -1542 2604 107 34 11 chr10 120621775 120622131 -19694634 - THE1B LTR MaLR 0 364 1 489 329 119 41 chr10 120622131 120622767 -19693998 + L2 LINE L2 1772 2486 -828 1455 158 188 17 chr10 120622855 120623147 -19693618 - MER2 DNA MER2_type -1 343 2 1847 169 0 6 chr10 120623319 120623632 -19693133 + AluSx SINE Alu 1 311 -1 1331 184 81 14 chr10 120623673 120623956 -19692809 + AluJo SINE Alu 1 302 -10 2221 162 51 49 chr10 120624574 120624846 -19691919 - MSTB1 LTR MaLR 0 432 157 1822 136 24 21 chr10 120624846 120625133 -19691632 + AluSx SINE Alu 1 288 -24 2221 162 51 49 chr10 120625133 120625291 -19691474 - MSTB1 LTR MaLR -275 157 1 2137 175 11 3 chr10 120626811 120627165 -19689600 - MLT1A1 LTR MaLR -4 361 5 3885 114 4 22 chr10 120627614 120628151 -19688614 - MER1A DNA MER1_type 0 527 1 2008 199 60 18 chr10 120628195 120628643 -19688122 - MLT1C LTR MaLR 0 467 1 1851 189 0 7 chr10 120628828 120629134 -19687631 + AluSx SINE Alu 1 304 -8 1928 152 0 23 chr10 120629256 120629559 -19687206 + AluSx SINE Alu 1 296 -16 900 262 39 0 chr10 120630228 120630457 -19686308 - MIR SINE MIR -17 245 8 2159 113 3 3 chr10 120630498 120630791 -19685974 + AluSx SINE Alu 1 293 -19 300 303 34 0 chr10 120630871 120630960 -19685805 + MIR SINE MIR 28 119 -143 969 233 115 11 chr10 120631009 120631372 -19685393 + L2 LINE L2 2672 3090 -223 1312 239 131 91 chr10 120631377 120631949 -19684816 - MLT1G LTR MaLR 0 590 1 587 234 136 22 chr10 120631950 120632134 -19684631 + L2 LINE L2 3109 3313 0 400 300 58 37 chr10 120632110 120632300 -19684465 - MIR SINE MIR -49 213 20 * 386 312 16 0 chr10 120633195 120633320 -19683445 + L2 LINE L2 1699 1825 -1489 316 367 65 7 chr10 120633748 120633887 -19682878 - L2 LINE L2 -4 3268 3122 2337 108 0 0 chr10 120634573 120634880 -19681885 - AluSg SINE Alu -3 307 1 274 268 113 10 chr10 120634946 120635043 -19681722 + MIR SINE MIR 49 155 -107 22 70 0 0 chr10 120635153 120635196 -19681569 + AT_rich Low_complexity Low_complexity 1 43 0 2005 120 14 0 chr10 120635209 120635484 -19681281 + AluSx SINE Alu 1 279 -33 252 257 18 71 chr10 120636405 120636518 -19680247 - MIR3 SINE MIR -25 183 77 738 241 16 76 chr10 120636960 120637209 -19679556 - MER102b DNA MER1_type -1 340 107 21 36 0 0 chr10 120637309 120637337 -19679428 + AT_rich Low_complexity Low_complexity 1 28 0 880 201 0 6 chr10 120638177 120638341 -19678424 + MER63 DNA MER1_type 1 789 -273 566 258 187 15 chr10 120638908 120639106 -19677659 - MIR SINE MIR -25 237 6 215 262 64 51 chr10 120640296 120640432 -19676333 + MIR SINE MIR 29 165 -62 212 250 261 0 chr10 120640689 120640781 -19675984 - L2 LINE L2 0 3272 3157 2281 92 3 0 chr10 120640985 120641280 -19675485 - AluSx SINE Alu -16 296 1 831 243 115 21 chr10 120641668 120641903 -19674862 + MIR SINE MIR 6 262 0 585 253 5 86 chr10 120642046 120642244 -19674521 - MER5A DNA MER1_type -1 188 7 1949 154 0 16 chr10 120642376 120642687 -19674078 - AluSx SINE Alu -6 306 1 24 0 0 0 chr10 120642851 120642875 -19673890 + AT_rich Low_complexity Low_complexity 1 24 0 204 324 95 0 chr10 120643553 120643658 -19673107 - L3 LINE CR1 -7 1570 1456 228 294 36 50 chr10 120643686 120643883 -19672882 + L3 LINE CR1 628 883 -694 237 300 25 12 chr10 120643888 120643968 -19672797 - L3 LINE CR1 -139 1438 1358 361 239 99 33 chr10 120643999 120644212 -19672553 + L2 LINE L2 2807 3033 -239 26 30 0 0 chr10 120644390 120644423 -19672342 + AT_rich Low_complexity Low_complexity 1 33 0 2321 99 0 3 chr10 120644431 120644735 -19672030 + AluSx SINE Alu 1 303 -9 7118 182 57 42 chr10 120644738 120646496 -19670269 - L1P4 LINE L1 -588 5578 3791 2112 80 4 4 chr10 120646496 120646758 -19670007 - AluY SINE Alu -15 296 35 7118 182 57 42 chr10 120646758 120647007 -19669758 - L1P4 LINE L1 -2375 3791 3547 2336 93 0 0 chr10 120647226 120647527 -19669238 - AluSg SINE Alu -7 303 3 648 0 0 0 chr10 120648136 120648208 -19668557 + (CA)n Simple_repeat Simple_repeat 2 73 0 254 276 26 13 chr10 120648815 120648891 -19667874 - MIR SINE MIR -10 252 176 2132 126 0 0 chr10 120649045 120649338 -19667427 - AluSx SINE Alu -19 293 1 5058 66 108 0 chr10 120650002 120650623 -19666142 + LTR12 LTR ERV1 1 688 0 21382 99 7 10 chr10 120650636 120653578 -19663187 + HERV9 LTR ERV1 40 2972 -5427 1340 117 5 0 chr10 120653577 120653765 -19663000 + HERV9 LTR ERV1 4756 4944 -3455 * 2352 174 122 61 chr10 120653766 120654597 -19662168 + HERV9 LTR ERV1 840 1720 -5176 * 4679 98 3 5 chr10 120654592 120655236 -19661529 + HERV9 LTR ERV1 7757 8399 0 5219 72 78 0 chr10 120655236 120655874 -19660891 + LTR12 LTR ERV1 1 688 0 2345 100 3 0 chr10 120656145 120656454 -19660311 + AluSg SINE Alu 1 310 0 888 191 0 0 chr10 120656477 120656629 -19660136 - MIR SINE MIR -10 252 101 1452 186 57 16 chr10 120656943 120657315 -19659450 - LTR37A LTR ERV1 -3 423 37 499 247 103 58 chr10 120657492 120657666 -19659099 - MER5A DNA MER1_type -7 182 1 208 226 57 0 chr10 120657794 120657847 -19658918 - L2 LINE L2 -16 3297 3242 2031 139 0 0 chr10 120659262 120659578 -19657187 + AluSx SINE Alu 1 316 0 790 221 81 6 chr10 120659864 120660036 -19656729 + MER5A DNA MER1_type 5 189 0 532 286 46 31 chr10 120660044 120660240 -19656525 + MIR SINE MIR 58 256 -6 368 245 31 20 chr10 120660243 120660341 -19656424 + MIR SINE MIR 54 152 -110 1735 183 67 58 chr10 120660600 120661032 -19655733 - MER63B DNA MER1_type 0 436 1 508 302 50 11 chr10 120661513 120661695 -19655070 + MER5A DNA MER1_type 1 189 0 1336 207 83 16 chr10 120661837 120662149 -19654616 + MLT1A1 LTR MaLR 1 333 -32 492 127 13 0 chr10 120662149 120662228 -19654537 + MADE1 DNA Mariner 1 80 0 1391 144 5 31 chr10 120662543 120662765 -19654000 + MER20 DNA MER1_type 1 216 -3 4245 120 37 10 chr10 120663644 120664262 -19652503 + MER41B LTR ERV1 1 635 0 298 335 90 0 chr10 120664344 120664499 -19652266 - MIR3 SINE MIR -1 207 39 33 25 0 0 chr10 120664851 120664891 -19651874 + AT_rich Low_complexity Low_complexity 1 40 0 280 227 62 10 chr10 120665075 120665172 -19651593 - L1ME4a LINE L1 -2 6119 6018 181 146 42 0 chr10 120666496 120666544 -19650221 + (TA)n Simple_repeat Simple_repeat 2 51 0 2227 102 0 0 chr10 120669002 120669297 -19647468 - AluSx SINE Alu -17 295 1 2310 79 31 0 chr10 120669893 120670183 -19646582 + AluSq SINE Alu 3 301 -12 25 0 0 0 chr10 120670253 120670278 -19646487 + AT_rich Low_complexity Low_complexity 1 25 0 236 159 0 23 chr10 120670698 120670742 -19646023 + LTR67 LTR ERVL 513 555 -2 449 270 85 66 chr10 120670744 120670955 -19645810 - L1ME4a LINE L1 -393 5728 5543 180 360 139 0 chr10 120671285 120671371 -19645394 - MIR SINE MIR -116 146 49 345 360 12 37 chr10 120671422 120671583 -19645182 + MIR SINE MIR 26 182 -80 1696 194 10 0 chr10 120671703 120672002 -19644763 + AluJo SINE Alu 1 302 -10 2241 103 3 0 chr10 120673584 120673886 -19642879 - AluSx SINE Alu -9 303 1 257 328 45 30 chr10 120673922 120674056 -19642709 + L2 LINE L2 3112 3247 -25 424 230 11 0 chr10 120674491 120674578 -19642187 - MLT1K LTR MaLR -2 586 499 2420 122 33 0 chr10 120677455 120677791 -19638974 - MER7A DNA MER2_type 0 346 2 214 343 38 19 chr10 120678111 120678216 -19638549 + L2 LINE L2 3106 3212 -60 2339 64 0 4 chr10 120678366 120678666 -19638099 - AluY SINE Alu 0 300 2 1196 165 24 14 chr10 120679198 120679410 -19637355 + L1MB2 LINE L1 5957 6170 -1 218 306 91 57 chr10 120679452 120679717 -19637048 + L2 LINE L2 2566 2839 -475 233 121 0 0 chr10 120679841 120679874 -19636891 - U2 snRNA snRNA -155 33 1 444 259 0 107 chr10 120680221 120680308 -19636457 - MIR SINE MIR -67 195 139 2160 124 3 0 chr10 120680308 120680606 -19636159 - AluSg SINE Alu -11 299 1 444 259 0 107 chr10 120680606 120680715 -19636050 - MIR SINE MIR -123 139 20 850 165 6 6 chr10 120680854 120681030 -19635735 + GA-rich Low_complexity Low_complexity 3 178 0 452 189 189 16 chr10 120681556 120681678 -19635087 + MIR SINE MIR 120 262 0 280 246 175 0 chr10 120683192 120683306 -19633459 - MIR SINE MIR -6 256 123 314 326 48 14 chr10 120683356 120683503 -19633262 - MER5B DNA MER1_type 0 178 27 271 156 203 16 chr10 120683590 120683654 -19633111 + MIR SINE MIR 79 154 -108 194 368 0 0 chr10 120683661 120683748 -19633017 - MIR SINE MIR -36 226 140 279 234 0 16 chr10 120683912 120683976 -19632789 + MIR3 SINE MIR 137 199 -9 32 0 0 0 chr10 120684180 120684212 -19632553 + AT_rich Low_complexity Low_complexity 1 32 0 843 277 10 5 chr10 120685001 120685203 -19631562 + MIR SINE MIR 4 206 -56 1139 259 117 27 chr10 120685297 120685534 -19631231 - L2 LINE L2 -71 3242 3028 1725 225 41 41 chr10 120685534 120686076 -19630689 - MER34 LTR ERV1 0 542 1 1139 259 117 27 chr10 120686076 120686454 -19630311 - L2 LINE L2 -285 3028 2550 412 278 0 10 chr10 120686459 120686556 -19630209 + L2 LINE L2 3177 3272 0 490 224 34 61 chr10 120686570 120686717 -19630048 + MIR SINE MIR 90 232 -30 283 243 11 9 chr10 120687720 120687860 -19628905 + MER5B DNA MER1_type 64 175 -3 600 281 73 31 chr10 120687935 120688127 -19628638 - MIR SINE MIR -55 207 8 400 114 0 25 chr10 120691143 120691222 -19625543 - AluSc SINE Alu 0 309 233 491 179 73 60 chr10 120691739 120691890 -19624875 + L2 LINE L2 2141 2293 -1021 3036 117 0 0 chr10 120691890 120692351 -19624414 - L1P LINE L1 -5675 471 11 2781 240 49 25 chr10 120692353 120693146 -19623619 + L2 LINE L2 2261 3069 -244 2331 99 7 0 chr10 120693157 120693460 -19623305 + AluSp SINE Alu 1 305 -8 1054 167 0 0 chr10 120693460 120693616 -19623149 + AluJb SINE Alu 134 289 -23 36 0 0 0 chr10 120693616 120693652 -19623113 + AT_rich Low_complexity Low_complexity 1 36 0 360 0 0 0 chr10 120693995 120694035 -19622730 + (TG)n Simple_repeat Simple_repeat 1 40 0 192 40 0 0 chr10 120694034 120694059 -19622706 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 1885 124 11 15 chr10 120694059 120694333 -19622432 - AluSx SINE Alu -39 273 1 2771 16 0 0 chr10 120694537 120694846 -19621919 + AluYa5 SINE Alu 1 309 -2 226 340 134 10 chr10 120699011 120699108 -19617657 + MIR3 SINE MIR 71 179 -29 447 92 0 0 chr10 120699132 120699197 -19617568 + (TG)n Simple_repeat Simple_repeat 2 66 0 349 306 47 50 chr10 120699314 120699514 -19617251 - MIR SINE MIR -18 190 21 831 262 214 80 chr10 120699682 120700016 -19616749 - HAL1 LINE L1 -182 2325 2037 2622 103 46 19 chr10 120700016 120700433 -19616332 - MSTA LTR MaLR 0 428 1 831 262 214 80 chr10 120700433 120700846 -19615919 - HAL1 LINE L1 -470 2037 1681 2701 10 0 0 chr10 120700846 120701138 -19615627 - AluYa5 SINE Alu -6 305 14 831 262 214 80 chr10 120701138 120701472 -19615293 - HAL1 LINE L1 -826 1681 1393 198 118 0 0 chr10 120701472 120701506 -19615259 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 831 262 214 80 chr10 120701506 120702472 -19614293 - HAL1 LINE L1 -1114 1393 1 1922 35 0 0 chr10 120704067 120704295 -19612470 - L1PA7 LINE L1 -8 6146 5919 255 246 172 45 chr10 120704975 120705109 -19611656 + MIR3 SINE MIR 16 166 -42 375 293 89 103 chr10 120706034 120707006 -19609759 - L1M2 LINE L1 -5446 1403 536 237 273 11 23 chr10 120707170 120707258 -19609507 + C-rich Low_complexity Low_complexity 4 90 0 28 48 0 0 chr10 120707297 120707339 -19609426 + GC_rich Low_complexity Low_complexity 1 42 0 759 244 30 67 chr10 120707656 120707926 -19608839 - MIR SINE MIR -2 260 1 22 0 0 0 chr10 120708462 120708484 -19608281 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 120710171 120710198 -19606567 + AT_rich Low_complexity Low_complexity 1 27 0 1780 164 3 7 chr10 120710302 120710589 -19606176 + AluJo SINE Alu 2 287 -25 2236 101 0 3 chr10 120710744 120711042 -19605723 + AluSc SINE Alu 2 298 -11 189 147 0 0 chr10 120711061 120711095 -19605670 + (TA)n Simple_repeat Simple_repeat 2 35 0 213 333 177 21 chr10 120711352 120711544 -19605221 + L2 LINE L2 2804 3025 -247 2607 39 13 0 chr10 120711553 120711858 -19604907 - AluY SINE Alu -2 309 1 5346 226 52 33 chr10 120712015 120713111 -19603654 - L1ME1 LINE L1 -8 6418 5344 1585 198 3 22 chr10 120713111 120713429 -19603336 + AluJo SINE Alu 1 312 0 5346 226 52 33 chr10 120713429 120714993 -19601772 - L1ME1 LINE L1 -1082 5344 3718 1123 209 41 6 chr10 120715013 120715352 -19601413 - L1ME1 LINE L1 -3404 3002 2652 892 211 34 122 chr10 120715349 120715560 -19601205 - L1M4 LINE L1 -1231 4915 4687 * 1819 141 0 11 chr10 120715560 120715823 -19600942 - AluSx SINE Alu -27 285 26 892 211 34 122 chr10 120715823 120716142 -19600623 - L1M4 LINE L1 -1459 4687 4445 2143 124 0 3 chr10 120716142 120716441 -19600324 - AluSx SINE Alu -14 298 1 892 211 34 122 chr10 120716441 120716530 -19600235 - L1M4 LINE L1 -1701 4445 4350 1034 101 0 30 chr10 120716594 120716763 -19600002 - L1MA3 LINE L1 0 6305 6142 4940 127 12 16 chr10 120716764 120718337 -19598428 - L1MA3 LINE L1 -265 6040 4474 * 9018 90 18 0 chr10 120718334 120719596 -19597169 + THE1A-int LTR MaLR 296 1580 0 2498 108 0 19 chr10 120719596 120719958 -19596807 + THE1A LTR MaLR 1 355 0 1113 219 93 7 chr10 120719958 120720228 -19596537 - MSTD LTR MaLR -42 354 62 3927 244 116 22 chr10 120720231 120721376 -19595389 - MSTD-int LTR MaLR -71 1664 412 3642 144 48 0 chr10 120721377 120721954 -19594811 - LTR9 LTR ERV1 0 612 8 1448 263 17 12 chr10 120721957 120722372 -19594393 - MSTD-int LTR MaLR -1317 418 2 1717 190 78 19 chr10 120722374 120722748 -19594017 - MSTD LTR MaLR 0 396 1 301 238 0 0 chr10 120722757 120722837 -19593928 - MLT-int LTR MaLR -1396 339 260 259 254 0 0 chr10 120722842 120722905 -19593860 - L1ME1 LINE L1 -5507 902 840 479 139 39 47 chr10 120722905 120723034 -19593731 - L1MB7 LINE L1 0 6184 6057 1118 229 125 77 chr10 120723338 120723778 -19592987 + MLT1E2 LTR MaLR 137 615 -9 2272 190 26 0 chr10 120724437 120724858 -19591907 - MSTB1 LTR MaLR 0 432 1 1578 147 67 52 chr10 120725092 120725479 -19591286 + L1MA7 LINE L1 4340 4732 -1414 8319 106 16 11 chr10 120725479 120726536 -19590229 + HSMAR2 DNA Mariner 6 1073 -229 2385 99 48 20 chr10 120726536 120726890 -19589875 + THE1B LTR MaLR 1 364 0 8319 106 16 11 chr10 120726890 120727121 -19589644 + HSMAR2 DNA Mariner 1073 1301 -1 4895 170 22 22 chr10 120727121 120728655 -19588110 + L1MA7 LINE L1 4753 6291 0 967 190 0 0 chr10 120729130 120729309 -19587456 - MER58A DNA MER1_type -1 223 45 224 339 36 51 chr10 120729538 120729733 -19587032 - L2 LINE L2 -2395 919 728 6640 113 13 2 chr10 120730172 120731433 -19585332 - L1MA2 LINE L1 0 6304 5028 434 241 78 54 chr10 120732036 120732202 -19584563 + MIR SINE MIR 93 262 0 209 273 40 10 chr10 120732440 120732539 -19584226 + (TATATG)n Simple_repeat Simple_repeat 6 107 0 21 0 0 0 chr10 120732785 120732806 -19583959 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 120733560 120733581 -19583184 + AT_rich Low_complexity Low_complexity 1 21 0 384 208 1 44 chr10 120734094 120734225 -19582540 - L1MB7 LINE L1 0 6184 6050 2070 127 3 3 chr10 120734225 120734516 -19582249 - AluSc SINE Alu -18 291 1 24 32 0 0 chr10 120734721 120734752 -19582013 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 120735434 120735455 -19581310 + AT_rich Low_complexity Low_complexity 1 21 0 219 188 0 0 chr10 120735746 120735794 -19580971 + T-rich Low_complexity Low_complexity 5 52 0 524 292 140 22 chr10 120736327 120736511 -19580254 - MIR SINE MIR -16 246 44 1199 258 54 98 chr10 120736692 120736756 -19580009 - MER21B LTR ERV1 -161 702 637 3459 136 13 4 chr10 120736756 120737278 -19579487 + MER1A DNA MER1_type 1 527 0 1199 258 54 98 chr10 120737278 120737846 -19578919 - MER21B LTR ERV1 -226 637 98 439 260 73 20 chr10 120737814 120737964 -19578801 - MER77 LTR ERV1 -403 202 45 * 662 274 87 17 chr10 120738278 120738508 -19578257 - MIR SINE MIR -11 251 6 2179 111 0 7 chr10 120739158 120739464 -19577301 - AluSc SINE Alu -5 304 1 318 239 111 17 chr10 120741224 120741341 -19575424 - MIR SINE MIR -37 225 98 2453 45 0 3 chr10 120741661 120741949 -19574816 + AluY SINE Alu 11 297 -14 195 100 0 0 chr10 120744317 120744347 -19572418 + (TG)n Simple_repeat Simple_repeat 1 30 0 7457 35 0 0 chr10 120745035 120746469 -19570296 - L1PA5 LINE L1 0 6154 4722 19122 46 7 0 chr10 120746469 120748894 -19567871 + L1PA5 LINE L1 2304 4745 -1401 1352 205 3 20 chr10 120748953 120749246 -19567519 - AluJb SINE Alu 0 312 25 3494 146 26 0 chr10 120749392 120749973 -19566792 - L1MC1 LINE L1 -5 6328 5733 860 80 26 0 chr10 120750195 120750308 -19566457 + AluSp/q SINE Alu 177 292 -21 280 232 29 0 chr10 120750322 120750391 -19566374 - LTR67 LTR ERVL -12 545 475 491 259 60 43 chr10 120750396 120750530 -19566235 + MLT1J LTR MaLR 4 134 -377 2146 119 76 17 chr10 120750530 120750874 -19565891 - THE1B LTR MaLR 0 364 1 11358 91 9 4 chr10 120750874 120752445 -19564320 - THE1B-int LTR MaLR 0 1580 1 2090 132 79 15 chr10 120752445 120752787 -19563978 - THE1B LTR MaLR 0 364 1 491 259 60 43 chr10 120752787 120752835 -19563930 + MLT1J LTR MaLR 133 191 -320 236 267 40 0 chr10 120752893 120752968 -19563797 + MLT1J LTR MaLR 391 468 -43 22 35 0 0 chr10 120753445 120753474 -19563291 + AT_rich Low_complexity Low_complexity 1 29 0 214 291 146 27 chr10 120753636 120753746 -19563019 - L3b LINE CR1 -253 1330 1208 427 301 40 40 chr10 120754121 120754320 -19562445 + L2 LINE L2 3115 3313 0 2432 246 51 77 chr10 120755066 120756301 -19560464 - L2 LINE L2 0 3313 2110 595 197 197 0 chr10 120756591 120756738 -19560027 - MLT1A2 LTR MaLR 0 374 199 306 169 0 0 chr10 120756788 120756853 -19559912 + GA-rich Low_complexity Low_complexity 2 66 0 950 213 16 6 chr10 120756884 120757067 -19559698 - MLT1A2 LTR MaLR -186 188 4 2091 103 6 19 chr10 120757076 120757253 -19559512 - AluSg SINE Alu -1 309 136 2275 64 0 35 chr10 120757253 120757564 -19559201 - AluY SINE Alu -11 300 1 2091 103 6 19 chr10 120757564 120757697 -19559068 - AluSg SINE Alu -174 136 3 26 64 0 0 chr10 120758010 120758057 -19558708 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr10 120758159 120758183 -19558582 + AT_rich Low_complexity Low_complexity 1 24 0 13741 166 28 41 chr10 120759444 120761667 -19555098 - L1MA4A LINE L1 -5 6298 4047 1831 233 55 43 chr10 120761667 120761853 -19554912 - LTR9 LTR ERV1 0 612 430 1885 124 62 0 chr10 120761853 120762143 -19554622 - AluSx SINE Alu -4 308 1 1831 233 55 43 chr10 120762143 120762561 -19554204 - LTR9 LTR ERV1 -182 430 1 13741 166 28 41 chr10 120762561 120763834 -19552931 - L1MA4A LINE L1 -2256 4047 2874 23841 45 8 14 chr10 120763834 120767694 -19549071 - L1PA5 LINE L1 -3 6151 2308 13741 166 28 41 chr10 120767694 120768435 -19548330 - L1MA4A LINE L1 -3429 2874 2125 406 286 120 31 chr10 120768483 120768675 -19548090 - MIR SINE MIR 0 262 54 660 297 19 23 chr10 120768781 120769037 -19547728 - L2 LINE L2 -514 2800 2546 983 234 54 22 chr10 120769346 120769624 -19547141 - L2 LINE L2 -804 2510 2224 1849 153 67 3 chr10 120769972 120770344 -19546421 + L1MA4 LINE L1 5901 6296 -4 990 226 71 28 chr10 120770652 120770935 -19545830 - MLT1D LTR MaLR -206 299 5 375 210 25 67 chr10 120771124 120771243 -19545522 - L1MC4 LINE L1 -1 8041 7928 810 163 95 0 chr10 120771367 120771514 -19545251 - MER58B DNA MER1_type -1 340 180 29 47 0 0 chr10 120772235 120772278 -19544487 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr10 120772535 120772558 -19544207 + AT_rich Low_complexity Low_complexity 1 23 0 25 90 0 0 chr10 120772624 120772691 -19544074 + AT_rich Low_complexity Low_complexity 1 67 0 29 0 0 0 chr10 120772705 120772734 -19544031 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 120772878 120772910 -19543855 + AT_rich Low_complexity Low_complexity 1 32 0 883 117 9 126 chr10 120774043 120774257 -19542508 + MER53 DNA DNA 1 189 0 227 209 30 15 chr10 120775281 120775348 -19541417 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 463 333 170 26 chr10 120775350 120775756 -19541009 - L2 LINE L2 -203 3110 2640 1408 254 134 13 chr10 120775759 120776283 -19540482 - L2 LINE L2 -1114 2200 1614 322 262 66 25 chr10 120776373 120776495 -19540270 - L1M4 LINE L1 -2947 3199 3073 1729 145 0 7 chr10 120776499 120776768 -19539997 - AluJo SINE Alu -45 267 1 527 154 55 0 chr10 120776794 120776885 -19539880 + MER58C DNA MER1_type 119 214 -1 295 212 24 24 chr10 120776900 120776985 -19539780 - L2 LINE L2 -1817 1497 1413 4240 136 29 5 chr10 120777482 120778220 -19538545 + L1MA4 LINE L1 5541 6295 -5 21 0 0 0 chr10 120778317 120778338 -19538427 + AT_rich Low_complexity Low_complexity 1 21 0 4941 174 36 16 chr10 120779002 120780568 -19536197 - L1MB3 LINE L1 -7 6176 4583 5686 181 34 38 chr10 120780885 120782307 -19534458 - L1MB8 LINE L1 0 6178 4770 2249 109 0 7 chr10 120782307 120782609 -19534156 - AluSx SINE Alu -12 300 1 5686 181 34 38 chr10 120782609 120783421 -19533344 - L1MB8 LINE L1 -1408 4770 3957 28 99 0 0 chr10 120784043 120784134 -19532631 + AT_rich Low_complexity Low_complexity 1 91 0 23 0 0 0 chr10 120784508 120784531 -19532234 + AT_rich Low_complexity Low_complexity 1 23 0 2321 319 120 4 chr10 120785246 120786188 -19530577 + L2 LINE L2 380 1430 -1884 759 337 87 30 chr10 120786398 120786997 -19529768 - L1MB8 LINE L1 -3316 2830 2198 214 175 0 48 chr10 120787333 120787396 -19529369 + T-rich Low_complexity Low_complexity 1 60 0 34 24 0 0 chr10 120787595 120787636 -19529129 + AT_rich Low_complexity Low_complexity 1 41 0 1255 180 9 0 chr10 120787658 120787880 -19528885 - MER58A DNA MER1_type 0 224 1 265 354 74 17 chr10 120788023 120788198 -19528567 - L1MEd LINE L1 -5647 472 288 27 49 0 0 chr10 120788782 120788823 -19527942 + AT_rich Low_complexity Low_complexity 1 41 0 2705 35 14 2 chr10 120788972 120789503 -19527262 - L1P2 LINE L1 -568 5586 5052 1884 227 104 135 chr10 120789506 120790498 -19526267 - L2 LINE L2 -635 2679 1719 446 195 102 16 chr10 120790500 120790628 -19526137 - LTR16C LTR ERVL -2 489 351 468 181 96 0 chr10 120790752 120790846 -19525919 - AluSq/x SINE Alu -186 126 24 1804 159 36 0 chr10 120790968 120791304 -19525461 - AluSx SINE Alu 0 347 1 1194 176 37 118 chr10 120791633 120792007 -19524758 + MLT1A1 LTR MaLR 1 344 -21 198 209 23 0 chr10 120792108 120792151 -19524614 + L2 LINE L2 3270 3313 0 595 298 118 8 chr10 120792341 120792603 -19524162 + LTR33 LTR ERVL 102 392 -129 325 298 41 41 chr10 120793384 120793602 -19523163 - L1ME3A LINE L1 -224 5946 5729 * 877 303 68 47 chr10 120793596 120793940 -19522825 + HAL1b LINE L1 276 640 -708 529 266 59 54 chr10 120793940 120794162 -19522603 - MER58A DNA MER1_type -1 223 1 877 303 68 47 chr10 120794162 120794434 -19522331 + HAL1b LINE L1 640 905 -443 2946 200 78 15 chr10 120794436 120795177 -19521588 + Looper DNA T2_type 3 790 -768 453 224 115 6 chr10 120795219 120795375 -19521390 + Looper DNA T2_type 1385 1557 -1 325 279 130 47 chr10 120796151 120796753 -19520012 + L1 LINE L1 2809 3460 -2686 24 0 0 0 chr10 120797066 120797090 -19519675 + AT_rich Low_complexity Low_complexity 1 24 0 304 312 126 10 chr10 120797135 120797436 -19519329 + L1 LINE L1 3769 4104 -2042 222 250 0 0 chr10 120797445 120797533 -19519232 + (TA)n Simple_repeat Simple_repeat 1 88 0 2827 244 93 60 chr10 120797560 120798982 -19517783 + L1MC4a LINE L1 5897 7364 -444 603 199 20 68 chr10 120798993 120799139 -19517626 - MER58B DNA MER1_type -1 340 202 1438 107 76 84 chr10 120799139 120799285 -19517480 + L1MA3 LINE L1 5191 5337 -956 4384 109 86 9 chr10 120799285 120800053 -19516712 + L1MA3 LINE L1 5479 6305 0 1438 107 76 84 chr10 120800053 120800269 -19516496 + L1MA3 LINE L1 5337 5550 -743 888 197 33 170 chr10 120800348 120800773 -19515992 + L1MC4 LINE L1 7459 7812 -230 2181 97 33 3 chr10 120800773 120801073 -19515692 - AluSc SINE Alu 0 309 1 888 197 33 170 chr10 120801073 120801130 -19515635 + L1MC4 LINE L1 7812 7875 -167 398 141 0 26 chr10 120801134 120801212 -19515553 + (GGGAGA)n Simple_repeat Simple_repeat 3 78 0 266 149 160 75 chr10 120801230 120801324 -19515441 + L1MC4 LINE L1 7939 8040 -2 23 0 0 0 chr10 120801772 120801795 -19514970 + AT_rich Low_complexity Low_complexity 1 23 0 7185 130 51 1 chr10 120802121 120803292 -19513473 + Tigger3b DNA MER2_type 1 1230 -1 211 328 88 16 chr10 120803527 120803652 -19513113 - L3 LINE CR1 -113 1464 1331 7232 153 40 23 chr10 120803664 120804596 -19512169 - L1MA3 LINE L1 0 7724 6809 1924 143 18 49 chr10 120804596 120804981 -19511784 + THE1C LTR MaLR 1 373 -2 7232 153 40 23 chr10 120804981 120806436 -19510329 - L1MA3 LINE L1 -915 6809 5287 4910 190 42 30 chr10 120806435 120808853 -19507912 - L1MA3 LINE L1 -2608 4957 2513 * 579 254 92 26 chr10 120808861 120809089 -19507676 - L1M4 LINE L1 -945 6620 6378 704 220 6 38 chr10 120809099 120809258 -19507507 + AluJo SINE Alu 126 279 -33 240 35 0 0 chr10 120809261 120809290 -19507475 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3488 253 90 12 chr10 120809305 120810644 -19506121 - L1M4 LINE L1 -1253 6312 4870 * 4931 160 20 22 chr10 120810636 120810710 -19506055 - L1MA8 LINE L1 -430 5861 5788 774 158 87 158 chr10 120810710 120810963 -19505802 + MER8 DNA MER2_type 1 235 -4 4931 160 20 22 chr10 120810963 120812351 -19504414 - L1MA8 LINE L1 -503 5788 4401 2028 109 21 0 chr10 120812385 120812668 -19504097 + AluSc SINE Alu 1 289 -20 17434 28 0 1 chr10 120813324 120816165 -19500600 - L1PA3 LINE L1 0 6155 3315 1948 138 0 47 chr10 120816673 120816991 -19499774 - AluSx SINE Alu -9 303 1 4359 185 35 3 chr10 120817123 120818036 -19498729 - L1MA8 LINE L1 -1723 4423 3482 700 236 123 23 chr10 120818055 120818340 -19498425 - L1M4 LINE L1 -4217 3350 3043 330 228 31 56 chr10 120818378 120818540 -19498225 - L1MEc LINE L1 -3934 2643 2449 2617 222 67 19 chr10 120818554 120819432 -19497333 - L1MEc LINE L1 -3996 2544 1625 830 263 64 6 chr10 120819441 120819768 -19496997 - L1MEc LINE L1 -4292 2104 1759 6345 53 0 2 chr10 120819782 120820567 -19496198 - L1PA6 LINE L1 -1 6153 5371 381 260 213 47 chr10 120820576 120820872 -19495893 - L1MEc LINE L1 -4571 1644 1300 1437 278 47 61 chr10 120821106 120822042 -19494723 - L1MEc LINE L1 -5215 1181 259 311 200 88 24 chr10 120822147 120822272 -19494493 + L1MEc LINE L1 23 155 -6241 275 313 40 10 chr10 120822359 120822458 -19494307 - L1MEc LINE L1 -6144 252 151 1656 216 66 16 chr10 120823234 120823660 -19493105 - L1MD2 LINE L1 -2 6357 5911 * 4094 216 73 54 chr10 120823646 120824145 -19492620 - L1MDa LINE L1 -3977 2563 2075 873 10 0 0 chr10 120824145 120824247 -19492518 - L1PA2 LINE L1 0 6155 6054 4094 216 73 54 chr10 120824247 120824706 -19492059 - L1MDa LINE L1 -4465 2075 1626 1848 51 4 0 chr10 120824706 120824942 -19491823 - L1PA4 LINE L1 0 6155 5919 4094 216 73 54 chr10 120824942 120825121 -19491644 - L1MDa LINE L1 -4914 1626 1452 814 149 25 37 chr10 120825121 120825282 -19491483 - L1PA16 LINE L1 -9 6157 5999 4094 216 73 54 chr10 120825282 120825449 -19491316 - L1MDa LINE L1 -5088 1452 1290 4605 88 14 11 chr10 120825449 120826105 -19490660 + L1PA13 LINE L1 5500 6157 -6 4094 216 73 54 chr10 120826105 120826340 -19490425 - L1MDa LINE L1 -5250 1290 992 1047 299 108 8 chr10 120826394 120826755 -19490010 - L1MDa LINE L1 -5991 552 156 318 324 69 14 chr10 120826756 120826901 -19489864 + MIR SINE MIR 70 222 -40 295 255 153 20 chr10 120826931 120827127 -19489638 + L1MC4a LINE L1 5688 5909 -1899 297 0 0 0 chr10 120827136 120827169 -19489596 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr10 120827408 120827429 -19489336 + AT_rich Low_complexity Low_complexity 1 21 0 239 274 158 0 chr10 120828390 120828485 -19488280 + L2 LINE L2 3195 3304 -9 200 173 269 0 chr10 120828619 120828671 -19488094 + L2 LINE L2 3207 3272 0 791 301 63 15 chr10 120829262 120829657 -19487108 - L1ME LINE L1 -421 5749 5336 22 35 0 0 chr10 120829683 120829712 -19487053 + AT_rich Low_complexity Low_complexity 1 29 0 209 169 46 46 chr10 120829981 120830046 -19486719 + T-rich Low_complexity Low_complexity 3 67 0 180 0 0 0 chr10 120830179 120830199 -19486566 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 2086 118 3 0 chr10 120830199 120830488 -19486277 - AluSq SINE Alu -23 290 1 22 80 0 0 chr10 120830815 120830865 -19485900 + AT_rich Low_complexity Low_complexity 1 50 0 18798 102 10 21 chr10 120831055 120832055 -19484710 - Charlie3 DNA MER1_type 0 2706 1697 2376 86 10 0 chr10 120832055 120832356 -19484409 + AluSg SINE Alu 1 304 -6 18798 102 10 21 chr10 120832356 120832723 -19484042 - Charlie3 DNA MER1_type -1009 1697 1328 1783 190 0 0 chr10 120832723 120833033 -19483732 + AluJb SINE Alu 3 312 0 18798 102 10 21 chr10 120833033 120834353 -19482412 - Charlie3 DNA MER1_type -1378 1328 46 1040 280 66 30 chr10 120835226 120835936 -19480829 + L1MEc LINE L1 1016 1751 -4645 702 243 23 41 chr10 120836097 120836315 -19480450 + AluSx SINE Alu 1 214 -98 779 153 0 8 chr10 120836849 120836980 -19479785 + AluSg/x SINE Alu 176 305 -5 305 200 62 12 chr10 120836980 120837060 -19479705 + MLT1J2 LTR MaLR 367 450 0 251 244 43 139 chr10 120837063 120837178 -19479587 + MIR SINE MIR 159 262 0 343 241 13 0 chr10 120837421 120837500 -19479265 - L3 LINE CR1 -5 1572 1493 189 351 22 30 chr10 120837707 120837841 -19478924 + MIR SINE MIR 59 191 -71 3914 206 13 7 chr10 120838214 120839051 -19477714 + L1P LINE L1 4510 5351 -795 1114 93 0 0 chr10 120839242 120839392 -19477373 + Tigger3(Golem) DNA MER2_type 2203 2352 -677 1884 259 47 38 chr10 120839400 120840208 -19476557 + L1PA13 LINE L1 1556 2371 -4426 478 335 45 0 chr10 120840791 120840946 -19475819 + MIR3 SINE MIR 18 179 -29 24 32 0 0 chr10 120841235 120841266 -19475499 + AT_rich Low_complexity Low_complexity 1 31 0 22 80 0 0 chr10 120841572 120841622 -19475143 + AT_rich Low_complexity Low_complexity 1 50 0 462 141 51 0 chr10 120842583 120842661 -19474104 + AluSg/x SINE Alu 217 298 -14 1445 262 87 90 chr10 120842667 120843298 -19473467 + L1ME3A LINE L1 2141 2772 -3374 2109 115 3 10 chr10 120843298 120843603 -19473162 - AluSc SINE Alu -6 303 1 1445 262 87 90 chr10 120843603 120844841 -19471924 + L1ME3A LINE L1 2772 4151 -1995 279 0 0 0 chr10 120844844 120844875 -19471890 + (TATAA)n Simple_repeat Simple_repeat 3 33 0 934 259 27 30 chr10 120844900 120845270 -19471495 + L1ME3A LINE L1 4301 4669 -1477 2648 122 17 22 chr10 120845460 120845877 -19470888 + L1PA16 LINE L1 5492 5906 -260 1262 251 95 58 chr10 120845495 120846116 -19470649 + L1ME3A LINE L1 5527 6170 0 * 207 0 0 0 chr10 120846746 120846769 -19469996 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 2216 114 0 3 chr10 120846800 120847106 -19469659 - AluSq SINE Alu -2 311 7 24 32 0 0 chr10 120847402 120847433 -19469332 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 120847581 120847609 -19469156 + AT_rich Low_complexity Low_complexity 1 28 0 1239 288 72 27 chr10 120848205 120848914 -19467851 - L2 LINE L2 -90 3223 2485 351 0 0 0 chr10 120848917 120848956 -19467809 + (GA)n Simple_repeat Simple_repeat 1 39 0 390 85 0 0 chr10 120850014 120850073 -19466692 + (GA)n Simple_repeat Simple_repeat 2 60 0 2559 258 195 14 chr10 120850073 120851117 -19465648 - L2 LINE L2 -831 2483 1251 628 284 107 41 chr10 120851176 120851542 -19465223 - L1ME LINE L1 -404 5758 5369 236 308 50 30 chr10 120851581 120851779 -19464986 - L1ME LINE L1 -867 5279 5078 249 33 0 0 chr10 120851842 120851872 -19464893 + (TG)n Simple_repeat Simple_repeat 1 30 0 1465 244 56 34 chr10 120852012 120852459 -19464306 - MLT1C LTR MaLR 0 467 11 1184 286 102 38 chr10 120852475 120853514 -19463251 - L1ME LINE L1 -1772 4374 3269 421 211 145 7 chr10 120853545 120853697 -19463068 - L1MC4 LINE L1 -167 8686 8514 1720 165 7 0 chr10 120853735 120854032 -19462733 - AluJb SINE Alu 0 312 14 584 180 296 0 chr10 120854157 120854346 -19462419 - L1MC4 LINE L1 -365 8488 8244 1938 198 45 39 chr10 120854385 120854869 -19461896 - L1MB7 LINE L1 -16 6168 5682 * 5717 205 68 19 chr10 120854853 120857784 -19458981 - L1MC2 LINE L1 -13 7142 5017 198 0 0 0 chr10 120857784 120857806 -19458959 + (TTG)n Simple_repeat Simple_repeat 1 22 0 5717 205 68 19 chr10 120857806 120858237 -19458528 - L1MC2 LINE L1 -2138 5017 4608 2040 103 3 3 chr10 120858379 120858688 -19458077 - AluSg SINE Alu 0 309 1 2369 260 51 37 chr10 120858688 120859395 -19457370 - L1MC2 LINE L1 -6134 725 9 2077 103 0 19 chr10 120859404 120859714 -19457051 - AluY SINE Alu -7 304 1 22 0 0 0 chr10 120859865 120859887 -19456878 + AT_rich Low_complexity Low_complexity 1 22 0 481 215 67 26 chr10 120860042 120860303 -19456462 + L1ME3A LINE L1 5837 6169 -1 29 0 0 0 chr10 120860454 120860483 -19456282 + AT_rich Low_complexity Low_complexity 1 29 0 374 282 126 6 chr10 120862537 120862711 -19454054 - MIR SINE MIR -2 260 66 203 254 159 0 chr10 120863620 120863683 -19453082 + MER5B DNA MER1_type 88 160 -18 2368 88 0 0 chr10 120864373 120864680 -19452085 + AluSp SINE Alu 1 307 -6 284 317 129 22 chr10 120865243 120865467 -19451298 - MIR SINE MIR -6 256 9 2765 19 0 0 chr10 120865707 120866016 -19450749 - AluYb8 SINE Alu -9 309 1 2674 194 58 41 chr10 120866108 120867130 -19449635 + L1MA5A LINE L1 4889 5945 -352 3931 114 21 8 chr10 120867300 120867932 -19448833 + L1MA5A LINE L1 5653 6292 -5 347 338 6 6 chr10 120867996 120868153 -19448612 + L1M4 LINE L1 3713 3869 -2277 227 196 54 18 chr10 120868208 120868264 -19448501 + L2 LINE L2 3253 3310 -3 1856 105 0 45 chr10 120868645 120868912 -19447853 - AluSq SINE Alu -58 255 1 189 229 0 0 chr10 120868947 120868995 -19447770 + (TA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 120869273 120869297 -19447468 + AT_rich Low_complexity Low_complexity 1 24 0 1954 322 92 16 chr10 120869640 120871089 -19445676 - HERV16 LTR ERVL -1905 3091 2098 2355 262 41 61 chr10 120871111 120871638 -19445127 - HERV16 LTR ERVL -3613 1383 879 2153 85 0 7 chr10 120871638 120871944 -19444821 - AluSg SINE Alu 0 305 2 2355 262 41 61 chr10 120871944 120872300 -19444465 - HERV16 LTR ERVL -4117 879 517 719 318 124 17 chr10 120872330 120872685 -19444080 - HERV16 LTR ERVL -4595 401 9 1274 307 37 16 chr10 120872696 120873129 -19443636 - LTR16A LTR ERVL -6 444 3 244 289 0 26 chr10 120873136 120873212 -19443553 - MLT1I LTR MaLR -47 362 289 37632 83 12 14 chr10 120873217 120879378 -19437387 - L1PA6 LINE L1 0 6154 2 274 240 90 30 chr10 120879485 120879585 -19437180 - MLT1I LTR MaLR -301 108 3 1469 302 90 27 chr10 120879828 120880683 -19436082 + HAL1 LINE L1 492 1400 -1107 1169 262 86 62 chr10 120880689 120881366 -19435399 + HAL1 LINE L1 1424 2161 -346 603 180 0 113 chr10 120881366 120881516 -19435249 + FLAM_A SINE Alu 1 133 0 1169 262 86 62 chr10 120881516 120881872 -19434893 + HAL1 LINE L1 2161 2507 0 477 281 104 22 chr10 120882206 120882690 -19434075 + L1ME LINE L1 5192 5583 -581 1765 134 18 0 chr10 120882817 120883101 -19433664 + L1M3 LINE L1 5335 5623 -560 204 301 110 0 chr10 120883114 120883187 -19433578 + MIR SINE MIR 87 167 -95 672 82 0 0 chr10 120883702 120883799 -19432966 - L1PA5 LINE L1 -1 6153 6057 207 273 0 0 chr10 120884743 120884809 -19431956 + T-rich Low_complexity Low_complexity 1 66 0 1729 161 47 0 chr10 120885630 120885909 -19430856 - AluSx SINE Alu -20 292 1 688 153 107 0 chr10 120886761 120886892 -19429873 + MER20 DNA MER1_type 2 146 -73 232 111 0 0 chr10 120886938 120886974 -19429791 - MER20 DNA MER1_type -18 201 166 2208 124 3 0 chr10 120887176 120887482 -19429283 - AluSx SINE Alu -5 307 1 305 226 43 54 chr10 120888050 120888143 -19428622 + L1MC4 LINE L1 6614 6705 -1337 524 143 39 5 chr10 120888143 120888297 -19428468 + (TA)n Simple_repeat Simple_repeat 2 256 0 1152 218 50 26 chr10 120888298 120888712 -19428053 - MLT2B1 LTR ERVL -41 479 1 2248 126 120 3 chr10 120888712 120889014 -19427751 - ERVL-B1 LTR ERVL -7 5757 5399 315 0 0 0 chr10 120889014 120889049 -19427716 + (CA)n Simple_repeat Simple_repeat 2 36 0 2248 126 120 3 chr10 120889049 120889128 -19427637 - ERVL-B1 LTR ERVL -365 5399 5331 1389 58 0 0 chr10 120889134 120889308 -19427457 - L1PA5 LINE L1 -2 6152 5979 1505 59 0 0 chr10 120889308 120889495 -19427270 + L1P2 LINE L1 5584 5770 -384 4778 173 19 19 chr10 120889510 120889672 -19427093 - ERVL-B1 LTR ERVL -448 5316 5155 2236 190 12 12 chr10 120889672 120890098 -19426667 + MSTB LTR MaLR 1 426 0 4778 173 19 19 chr10 120890098 120890778 -19425987 - ERVL-B1 LTR ERVL -608 5156 4474 5040 163 33 27 chr10 120940780 120940939 -19375826 - L1M2 LINE L1 -743 6105 5948 2366 85 7 0 chr10 120940939 120941245 -19375520 - AluSx SINE Alu -4 308 1 5040 163 33 27 chr10 120941245 120941394 -19375371 - L1M2 LINE L1 -900 5948 5801 2135 110 72 32 chr10 120941394 120941740 -19375025 - THE1B LTR MaLR -2 362 3 5040 163 33 27 chr10 120941740 120942694 -19374071 - L1M2 LINE L1 -1047 5801 4949 2241 210 50 90 chr10 120942694 120942797 -19373968 - LTR9 LTR ERV1 0 626 520 1964 120 0 4 chr10 120942797 120943073 -19373692 + AluSq SINE Alu 2 276 -37 2241 210 50 90 chr10 120943073 120943640 -19373125 - LTR9 LTR ERV1 -106 520 3 10323 211 37 75 chr10 120943642 120946627 -19370138 - L1M2 LINE L1 -1896 4952 2178 716 179 0 37 chr10 120946627 120946761 -19370004 + FLAM_A SINE Alu 1 129 -4 10323 211 37 75 chr10 120946761 120948849 -19367916 - L1M2 LINE L1 -4670 2178 12 23 0 0 0 chr10 120949047 120949070 -19367695 + AT_rich Low_complexity Low_complexity 1 23 0 262 344 106 62 chr10 120949237 120949510 -19367255 - L2 LINE L2 -2 3270 2986 2243 78 0 32 chr10 120949786 120950095 -19366670 + AluY SINE Alu 3 301 -10 198 216 0 0 chr10 120951298 120951335 -19365430 - L2 LINE L2 -5 3308 3272 21 89 0 0 chr10 120951584 120951640 -19365125 + AT_rich Low_complexity Low_complexity 1 56 0 342 233 103 35 chr10 120952126 120952242 -19364523 - MIR SINE MIR -61 201 78 22 35 0 0 chr10 120952348 120952377 -19364388 + AT_rich Low_complexity Low_complexity 1 29 0 3098 158 27 39 chr10 120953135 120953842 -19362923 - L1MB3 LINE L1 -3 6237 5497 605 212 48 12 chr10 120954787 120954952 -19361813 - L1MC4 LINE L1 -412 7630 7460 2214 104 7 0 chr10 120955646 120955945 -19360820 - AluSg SINE Alu -9 301 1 4221 126 17 3 chr10 120956808 120957443 -19359322 - LTR9B LTR ERV1 0 644 1 434 144 0 41 chr10 120958062 120958159 -19358606 + L1ME3A LINE L1 5856 5948 -222 292 115 0 0 chr10 120958564 120958616 -19358149 - L1MB4 LINE L1 0 6180 6129 471 249 153 37 chr10 120958651 120958892 -19357873 - HAL1 LINE L1 -833 1674 1406 21 0 0 0 chr10 120958933 120958954 -19357811 + AT_rich Low_complexity Low_complexity 1 21 0 2092 128 3 0 chr10 120959680 120959986 -19356779 - AluSx SINE Alu -5 307 1 12355 202 40 32 chr10 120961151 120963614 -19353151 - L1MB3 LINE L1 -960 5243 2801 2189 108 3 0 chr10 120963614 120963911 -19352854 - AluSg SINE Alu -12 298 1 12355 202 40 32 chr10 120963911 120965977 -19350788 - L1MB3 LINE L1 -3402 2801 684 195 42 0 0 chr10 120965977 120966001 -19350764 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 12355 202 40 32 chr10 120966001 120966113 -19350652 - L1MB3 LINE L1 -5519 684 574 24963 142 24 15 chr10 120968416 120973725 -19343040 - L1PA8A LINE L1 -5 6441 1078 1668 149 75 3 chr10 120973722 120974057 -19342708 - L1M2 LINE L1 -3952 2897 2539 * 2099 185 7 27 chr10 120974059 120974497 -19342268 + L1 LINE L1 4020 4448 -1698 447 333 61 45 chr10 120974504 120974816 -19341949 - L1M4b LINE L1 -4340 2798 2482 1830 263 68 11 chr10 120974989 120975827 -19340938 - L1M4b LINE L1 -4551 2408 1532 218 691 0 7 chr10 120975828 120975977 -19340788 + C-rich Low_complexity Low_complexity 1 148 0 2170 110 3 0 chr10 120975978 120976270 -19340495 - AluSq SINE Alu -20 293 1 2299 77 13 0 chr10 120976304 120976603 -19340162 - AluY SINE Alu -8 303 1 747 284 37 14 chr10 120976733 120976951 -19339814 + MER58A DNA MER1_type 1 223 -1 21 0 0 0 chr10 120977540 120977561 -19339204 + AT_rich Low_complexity Low_complexity 1 21 0 10459 29 1 2 chr10 120978601 120980624 -19336141 + L1PA3 LINE L1 4132 6154 -1 28 71 0 0 chr10 120980669 120980725 -19336040 + AT_rich Low_complexity Low_complexity 1 56 0 3599 164 33 64 chr10 120980817 120981672 -19335093 - L1MA6 LINE L1 -3 6297 5470 3386 275 42 28 chr10 120981671 120983591 -19333174 - L1 LINE L1 -3249 3857 1967 * 2255 84 0 3 chr10 120983591 120983877 -19332888 - AluY SINE Alu -18 293 9 3386 275 42 28 chr10 120983877 120984961 -19331804 - L1 LINE L1 -5139 1967 7 322 293 68 58 chr10 120985389 120985580 -19331185 + MIR SINE MIR 66 258 -4 2286 90 0 10 chr10 120986011 120986312 -19330453 - AluSx SINE Alu -14 298 1 713 262 86 25 chr10 120987354 120987598 -19329167 + MIR SINE MIR 3 261 -1 505 270 17 69 chr10 120987883 120988057 -19328708 + MER5B DNA MER1_type 7 171 -7 915 223 115 50 chr10 120988115 120988438 -19328327 + MER2 DNA MER2_type 1 344 0 424 256 80 45 chr10 120988531 120988707 -19328058 - MIR SINE MIR -8 254 73 2051 108 0 54 chr10 120989367 120989682 -19327083 - AluSg SINE Alu -10 300 3 1790 103 23 33 chr10 120989718 120990018 -19326747 - L1MA1 LINE L1 0 6302 6006 15134 161 30 25 chr10 120990018 120990320 -19326445 - L1MA1 LINE L1 -1 6301 6002 1924 154 9 26 chr10 120990320 120990663 -19326102 - MER1B DNA MER1_type 0 337 1 15134 161 30 25 chr10 120990663 120992667 -19324098 - L1MA1 LINE L1 -300 6002 4008 1990 128 3 3 chr10 120992667 120992964 -19323801 - AluSc SINE Alu -12 297 1 15134 161 30 25 chr10 120992964 120994763 -19322002 - L1MA1 LINE L1 -2294 4008 1891 18862 171 25 13 chr10 120994763 120998221 -19318544 - L1M1 LINE L1 -4059 3506 5 1215 201 73 11 chr10 120998206 120998479 -19318286 - L1MB5 LINE L1 -87 6087 5798 * 542 165 43 9 chr10 120998476 120998591 -19318174 - L1MB5 LINE L1 -745 5438 5320 * 2013 184 10 7 chr10 120998604 120999012 -19317753 - L1MB3 LINE L1 0 6183 5775 242 143 0 0 chr10 120999012 120999047 -19317718 - L1MB5 LINE L1 -79 6095 6061 659 183 9 0 chr10 120999051 120999166 -19317599 - L1MB3 LINE L1 -397 5786 5671 1144 229 64 3 chr10 120999173 120999487 -19317278 - L1MB3 LINE L1 -755 5391 5059 25 31 0 0 chr10 121000254 121000286 -19316479 + AT_rich Low_complexity Low_complexity 1 32 0 217 123 18 53 chr10 121000324 121000381 -19316384 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 352 284 114 91 chr10 121000400 121000504 -19316261 + MIR SINE MIR 3 103 -159 2119 113 3 0 chr10 121000504 121000796 -19315969 - AluSx SINE Alu -19 293 1 352 284 114 91 chr10 121000796 121000945 -19315820 + MIR SINE MIR 103 262 0 12693 181 37 28 chr10 121001354 121002579 -19314186 - L1MA4 LINE L1 -14 7705 6492 2552 74 0 0 chr10 121002579 121002888 -19313877 + AluSc SINE Alu 1 309 0 12693 181 37 28 chr10 121002888 121004252 -19312513 - L1MA4 LINE L1 -1227 6492 5142 316 53 0 35 chr10 121004252 121004309 -19312456 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 12693 181 37 28 chr10 121004309 121005175 -19311590 - L1MA4 LINE L1 -2577 5142 4285 1868 116 0 18 chr10 121005175 121005450 -19311315 + AluSp SINE Alu 37 306 -7 12693 181 37 28 chr10 121005450 121006550 -19310215 - L1MA4 LINE L1 -3434 4285 3107 1082 126 132 0 chr10 121006562 121006736 -19310029 - MER30 DNA MER1_type 0 230 34 4861 229 63 16 chr10 121006746 121008072 -19308693 - L1MA4 LINE L1 -4463 3102 1714 209 164 18 55 chr10 121010636 121010691 -19306074 + L2 LINE L2 3261 3313 0 324 324 54 14 chr10 121011148 121011296 -19305469 - MIR SINE MIR -101 161 8 23 0 0 0 chr10 121012158 121012181 -19304584 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 121012577 121012602 -19304163 + AT_rich Low_complexity Low_complexity 1 25 0 2687 221 110 36 chr10 121012948 121013177 -19303588 - L1MC4 LINE L1 -169 7873 7662 522 88 9 106 chr10 121013177 121013290 -19303475 - L1PA8 LINE L1 0 6172 6071 2687 221 110 36 chr10 121013290 121013830 -19302935 - L1MC4 LINE L1 -380 7662 7163 213 39 0 0 chr10 121013830 121013856 -19302909 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2687 221 110 36 chr10 121013856 121014082 -19302683 - L1MC4 LINE L1 -879 7163 6648 428 274 9 9 chr10 121014109 121014222 -19302543 - MER58 DNA MER1_type -101 114 2 707 171 55 17 chr10 121014866 121015047 -19301718 - L1MA8 LINE L1 -8 6283 6096 42364 34 22 2 chr10 121015047 121021066 -19295699 - L1PA2 LINE L1 -2 6153 8 1251 190 23 82 chr10 121021067 121021239 -19295526 - L1MA7 LINE L1 -184 6343 6201 2197 117 0 0 chr10 121021239 121021538 -19295227 - AluSx SINE Alu -13 299 1 1251 190 23 82 chr10 121021538 121021717 -19295048 - L1MA7 LINE L1 -326 6201 6013 11736 215 36 26 chr10 121021987 121022421 -19294344 - L1MA7 LINE L1 -527 6000 5572 2274 134 31 14 chr10 121022421 121022779 -19293986 + THE1B LTR MaLR 1 364 0 11391 92 10 2 chr10 121022779 121024347 -19292418 + THE1B-int LTR MaLR 1 1580 0 2253 128 33 19 chr10 121024347 121024706 -19292059 + THE1B LTR MaLR 1 364 0 11736 215 36 26 chr10 121024706 121026861 -19289904 - L1MA7 LINE L1 -955 5572 3440 186 43 0 0 chr10 121026861 121026884 -19289881 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 11736 215 36 26 chr10 121026884 121026966 -19289799 - L1MA7 LINE L1 -3087 3440 3360 716 68 17 17 chr10 121026966 121027084 -19289681 + (TTCC)n Simple_repeat Simple_repeat 2 119 0 11736 215 36 26 chr10 121027084 121028823 -19287942 - L1MA7 LINE L1 -3167 3360 1448 1086 192 10 5 chr10 121028823 121029021 -19287744 - AluJo SINE Alu -9 303 105 1050 178 0 0 chr10 121029022 121029185 -19287580 - AluJo SINE Alu -139 173 11 1948 277 75 33 chr10 121029191 121029671 -19287094 - L1M2c LINE L1 -4523 1512 1053 1844 157 50 0 chr10 121029671 121030008 -19286757 + THE1A LTR MaLR 1 354 -1 1948 277 75 33 chr10 121030008 121031072 -19285693 - L1M2c LINE L1 -4982 1053 317 248 320 65 33 chr10 121031119 121031272 -19285493 - L1M2c LINE L1 -5501 454 297 2169 88 0 14 chr10 121032369 121032666 -19284099 - AluY SINE Alu -18 293 1 3743 216 39 57 chr10 121032881 121033789 -19282976 - L1MB7 LINE L1 -10 6174 5251 2037 99 3 72 chr10 121033789 121034122 -19282643 - AluSx SINE Alu -2 310 1 3743 216 39 57 chr10 121034122 121035400 -19281365 - L1MB7 LINE L1 -933 5251 4013 326 300 10 0 chr10 121035440 121035540 -19281225 - L1M4 LINE L1 -1275 4871 4771 642 209 28 92 chr10 121035561 121035844 -19280921 - L1MB7 LINE L1 -2156 3990 3726 21 36 0 0 chr10 121036077 121036105 -19280660 + AT_rich Low_complexity Low_complexity 1 28 0 241 271 0 0 chr10 121036127 121036175 -19280590 + L1P3 LINE L1 1023 1070 -4805 22 0 0 0 chr10 121036536 121036558 -19280207 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 121036594 121036617 -19280148 + AT_rich Low_complexity Low_complexity 1 23 0 300 284 30 47 chr10 121036786 121036955 -19279810 - L1ME2 LINE L1 -22 6142 5977 1170 254 23 3 chr10 121037010 121037309 -19279456 - MER58B DNA MER1_type -36 305 1 2458 265 55 49 chr10 121037329 121038869 -19277896 - L1ME2 LINE L1 -226 5938 4377 1600 127 3 58 chr10 121038911 121039203 -19277562 - LTR22B LTR ERVK -3 489 214 2270 37 0 0 chr10 121039218 121039489 -19277276 - L1PA3 LINE L1 -3 6152 5882 1902 12 0 49 chr10 121039489 121039733 -19277032 + L1PA3 LINE L1 5663 5894 -261 1405 115 42 0 chr10 121039733 121039950 -19276815 - LTR22B LTR ERVK -266 226 1 1918 166 115 2 chr10 121040007 121040416 -19276349 - L1MB5 LINE L1 -8 6166 5712 291 220 21 50 chr10 121040934 121041075 -19275690 - L1P LINE L1 -3756 2390 2254 22 0 0 0 chr10 121041275 121041297 -19275468 + AT_rich Low_complexity Low_complexity 1 22 0 6166 178 87 23 chr10 121041364 121041776 -19274989 - L1MA7 LINE L1 0 6291 5907 2062 86 41 28 chr10 121041776 121042067 -19274698 + AluSg SINE Alu 1 295 -15 6166 178 87 23 chr10 121042067 121042083 -19274682 - L1MA7 LINE L1 -384 5907 5893 399 89 0 0 chr10 121042083 121042139 -19274626 + (TA)n Simple_repeat Simple_repeat 2 57 0 6166 178 87 23 chr10 121042139 121043850 -19272915 - L1MA7 LINE L1 -398 5893 4009 1426 270 35 12 chr10 121043896 121044326 -19272439 - L1M3e LINE L1 -6590 440 1 236 367 82 35 chr10 121046107 121046363 -19270402 - L2 LINE L2 -565 2749 2482 678 288 93 0 chr10 121046663 121046878 -19269887 - MIR SINE MIR 0 262 28 21 0 0 0 chr10 121047047 121047068 -19269697 + AT_rich Low_complexity Low_complexity 1 21 0 2959 136 38 2 chr10 121047414 121047913 -19268852 - L1PA16 LINE L1 -8 6158 5642 22 0 0 0 chr10 121048540 121048562 -19268203 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr10 121048593 121048622 -19268143 + AT_rich Low_complexity Low_complexity 1 29 0 750 253 7 0 chr10 121048905 121049051 -19267714 + MER45A DNA AcHobo 2 148 -30 497 252 109 26 chr10 121050317 121050547 -19266218 + L1MCc LINE L1 33 281 -6142 7107 179 42 6 chr10 121050912 121052388 -19264377 - L1PA16 LINE L1 -1638 4508 2980 1849 124 53 0 chr10 121052381 121052757 -19264008 + L1P4 LINE L1 5037 5432 -736 * 424 173 0 25 chr10 121052744 121052825 -19263940 + L1P LINE L1 4942 5020 -1126 * 3410 199 9 1 chr10 121052829 121053498 -19263267 - L1PA16 LINE L1 -3332 2814 2141 754 322 26 4 chr10 121053723 121053953 -19262812 + ERVL LTR ERVL 2033 2267 -3497 1059 281 36 43 chr10 121054592 121054984 -19261781 - MER20B DNA MER1_type -347 436 48 315 0 0 0 chr10 121055804 121055839 -19260926 + (T)n Simple_repeat Simple_repeat 1 35 0 2081 125 10 0 chr10 121056018 121056315 -19260450 - AluSx SINE Alu -12 300 1 727 299 126 21 chr10 121056839 121057173 -19259592 + MLT1J2 LTR MaLR 56 424 -26 23 0 0 0 chr10 121057379 121057402 -19259363 + AT_rich Low_complexity Low_complexity 1 23 0 508 295 93 47 chr10 121058119 121058258 -19258507 - L1ME3 LINE L1 -271 5891 5760 4952 39 0 0 chr10 121058258 121058852 -19257913 - L1PA4 LINE L1 -2 6153 5560 508 295 93 47 chr10 121058852 121059142 -19257623 - L1ME3 LINE L1 -402 5760 5442 237 278 100 33 chr10 121059310 121059490 -19257275 - L1ME3 LINE L1 -872 5274 5083 319 253 86 31 chr10 121059507 121059669 -19257096 - L1ME3 LINE L1 -2594 3552 3382 6133 189 25 50 chr10 121059673 121060546 -19256219 - L1MA5A LINE L1 0 6297 5404 2833 13 0 0 chr10 121060546 121060863 -19255902 - AluYb8 SINE Alu -1 317 1 6133 189 25 50 chr10 121060863 121062784 -19253981 - L1MA5A LINE L1 -893 5404 3652 2232 99 10 0 chr10 121062889 121063182 -19253583 - AluSc SINE Alu -13 296 1 1958 136 3 14 chr10 121063304 121063598 -19253167 - AluSg SINE Alu -19 291 1 77 80 0 0 chr10 121063749 121063924 -19252841 + AT_rich Low_complexity Low_complexity 1 175 0 24 53 0 0 chr10 121064280 121064318 -19252447 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr10 121064417 121064450 -19252315 + AT_rich Low_complexity Low_complexity 1 33 0 1416 257 19 92 chr10 121064469 121065109 -19251656 + MLT1E LTR MaLR 1 593 0 3037 258 57 117 chr10 121065954 121068786 -19247979 - L1MC4a LINE L1 -677 7131 4475 22 56 0 0 chr10 121068954 121068990 -19247775 + AT_rich Low_complexity Low_complexity 1 36 0 1085 324 22 29 chr10 121069465 121069919 -19246846 + L1M3a LINE L1 2 452 -5503 2216 219 70 17 chr10 121070270 121072602 -19244163 + L1PA15 LINE L1 539 2746 -3601 2217 108 0 3 chr10 121072602 121072907 -19243858 - AluSq SINE Alu -9 304 1 2216 219 70 17 chr10 121072907 121075603 -19241162 + L1PA15 LINE L1 2746 6342 -5 1181 119 26 0 chr10 121075612 121075805 -19240960 + L1MA3 LINE L1 6107 6304 -1 1512 170 29 4 chr10 121075815 121076126 -19240639 + AluJo SINE Alu 1 318 0 4031 171 26 42 chr10 121076137 121077460 -19239305 + L1MA6 LINE L1 4785 6084 -216 21 0 0 0 chr10 121077607 121077628 -19239137 + AT_rich Low_complexity Low_complexity 1 21 0 27 96 0 0 chr10 121077857 121077940 -19238825 + AT_rich Low_complexity Low_complexity 1 83 0 24 0 0 0 chr10 121077966 121077990 -19238775 + AT_rich Low_complexity Low_complexity 1 24 0 3568 233 78 23 chr10 121079258 121079284 -19237481 - L1ME LINE L1 -546 5620 5597 2054 128 7 0 chr10 121079284 121079581 -19237184 - AluSq SINE Alu -14 299 1 3568 233 78 23 chr10 121079581 121081247 -19235518 - L1ME LINE L1 -569 5597 3837 1170 260 67 36 chr10 121081240 121082012 -19234753 - L1PA8A LINE L1 -345 5815 4082 * 2252 82 0 13 chr10 121082344 121082648 -19234117 + AluY SINE Alu 1 300 -11 22 0 0 0 chr10 121082804 121082826 -19233939 + AT_rich Low_complexity Low_complexity 1 22 0 379 288 27 20 chr10 121082830 121082976 -19233789 - L1ME LINE L1 -2932 3214 3068 1008 141 6 0 chr10 121083056 121083219 -19233546 - L1PA15 LINE L1 -1 6164 6001 21 0 0 0 chr10 121083236 121083257 -19233508 + AT_rich Low_complexity Low_complexity 1 21 0 942 203 0 30 chr10 121083303 121083505 -19233260 + MER20 DNA MER1_type 24 219 0 680 250 37 120 chr10 121083505 121083684 -19233081 - L1MC5 LINE L1 -624 7337 7145 2164 85 30 10 chr10 121083684 121083989 -19232776 + AluSp SINE Alu 2 312 -1 680 250 37 120 chr10 121083989 121084301 -19232464 - L1MC5 LINE L1 -816 7145 6887 1162 219 28 28 chr10 121084569 121084889 -19231876 - MER33 DNA MER1_type 0 324 5 484 374 5 15 chr10 121086464 121086662 -19230103 + MER91A DNA MER1_type 1 196 0 726 253 93 0 chr10 121086853 121087047 -19229718 - MIR SINE MIR -1 261 50 357 252 50 63 chr10 121087114 121087273 -19229492 + L1M4 LINE L1 4465 4621 -1525 1322 180 149 55 chr10 121087512 121087592 -19229173 + MSTD LTR MaLR 1 72 -324 1903 68 57 15 chr10 121087592 121087855 -19228910 - AluY SINE Alu -11 300 27 1322 180 149 55 chr10 121087855 121088136 -19228629 + MSTD LTR MaLR 72 396 0 25 65 0 0 chr10 121089184 121089230 -19227535 + AT_rich Low_complexity Low_complexity 1 46 0 199 356 178 8 chr10 121089336 121089454 -19227311 - L2 LINE L2 -1 3271 3134 397 332 76 53 chr10 121089566 121090002 -19226763 - L2 LINE L2 -191 3081 2630 241 290 115 55 chr10 121090363 121090546 -19226219 - MIR SINE MIR -3 259 66 2428 159 5 31 chr10 121091427 121091873 -19224892 - Tigger2a DNA MER2_type 0 434 1 228 232 176 28 chr10 121091973 121092115 -19224650 - L1ME4a LINE L1 0 6121 5959 1093 205 111 20 chr10 121092124 121092422 -19224343 + MLT1D LTR MaLR 1 325 -180 2168 204 36 22 chr10 121092423 121092919 -19223846 - L1MC4a LINE L1 -659 7149 6647 1773 315 169 48 chr10 121092969 121094830 -19221935 + L2 LINE L2 793 2930 -342 468 0 0 0 chr10 121094834 121094886 -19221879 + (TC)n Simple_repeat Simple_repeat 2 53 0 1070 229 14 0 chr10 121095049 121095259 -19221506 - MER58A DNA MER1_type -1 223 11 296 218 27 82 chr10 121095289 121095399 -19221366 + L2 LINE L2 3121 3224 -89 283 270 102 26 chr10 121095833 121096059 -19220706 - L1 LINE L1 -3773 2373 2131 28 61 0 0 chr10 121096078 121096127 -19220638 + AT_rich Low_complexity Low_complexity 1 49 0 227 325 24 18 chr10 121096643 121096809 -19219956 + L1M4 LINE L1 4147 4313 -1833 21 0 0 0 chr10 121096968 121096989 -19219776 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr10 121097287 121097314 -19219451 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 2039 96 4 0 chr10 121097341 121097613 -19219152 - AluSx SINE Alu -39 273 1 1292 116 10 15 chr10 121097832 121098031 -19218734 + AluSg/x SINE Alu 113 310 -2 423 0 0 0 chr10 121098079 121098126 -19218639 + (TG)n Simple_repeat Simple_repeat 2 48 0 1895 194 25 43 chr10 121098163 121098652 -19218113 - L1MB7 LINE L1 0 6184 5705 23 33 0 0 chr10 121099409 121099439 -19217326 + AT_rich Low_complexity Low_complexity 1 30 0 311 259 25 0 chr10 121100016 121100097 -19216668 - MIR SINE MIR -1 261 179 24 0 0 0 chr10 121100120 121100144 -19216621 + AT_rich Low_complexity Low_complexity 1 24 0 626 294 90 46 chr10 121100179 121100757 -19216008 - L1ME4a LINE L1 -288 5874 5255 2136 212 48 27 chr10 121100837 121101394 -19215371 + L1PA14 LINE L1 2680 3248 -2898 333 130 0 0 chr10 121101396 121101450 -19215315 - MADE1 DNA Mariner -26 54 1 405 0 0 0 chr10 121101462 121101507 -19215258 + (CAA)n Simple_repeat Simple_repeat 1 45 0 528 244 0 0 chr10 121101512 121101631 -19215134 + L1PA14 LINE L1 3523 3641 -2505 1812 209 137 71 chr10 121101636 121102397 -19214368 + LTR1B LTR ERV1 3 813 -13 8547 174 23 0 chr10 121102413 121104870 -19211895 + L1PA14 LINE L1 3643 6152 -9 342 309 68 25 chr10 121104956 121105118 -19211647 - L1ME4a LINE L1 -1073 5073 4905 3646 195 27 17 chr10 121105139 121105943 -19210822 - L1MA10 LINE L1 0 6334 5523 6842 184 36 37 chr10 121105944 121106218 -19210547 - L1MA10 LINE L1 -791 5355 5082 3044 28 0 0 chr10 121106218 121106573 -19210192 + L1PA3 LINE L1 5800 6154 -1 6842 184 36 37 chr10 121106573 121107903 -19208862 - L1MA10 LINE L1 -1064 5082 3752 6807 70 5 2 chr10 121107904 121109257 -19207508 + L1PA7 LINE L1 4796 6151 -3 323 350 104 16 chr10 121109279 121109462 -19207303 + L2 LINE L2 1041 1239 -2075 584 280 101 19 chr10 121109603 121109810 -19206955 - MER52A LTR ERV1 -450 1305 1082 * 757 181 96 181 chr10 121109798 121110130 -19206635 - MER52A LTR ERV1 -785 970 667 992 260 113 24 chr10 121110139 121110589 -19206176 + L2 LINE L2 1268 1757 -1557 8817 43 6 1 chr10 121111508 121112574 -19204191 + MER11C LTR ERVK 1 1071 0 1125 294 128 30 chr10 121112589 121113197 -19203568 + L2 LINE L2 1959 2626 -688 244 370 84 0 chr10 121113215 121113334 -19203431 + L2 LINE L2 2913 3041 -272 272 268 134 0 chr10 121113406 121113488 -19203277 + L2 LINE L2 3184 3276 -37 25 51 0 0 chr10 121113793 121113832 -19202933 + AT_rich Low_complexity Low_complexity 1 39 0 303 241 71 27 chr10 121114191 121114303 -19202462 + L1ME4a LINE L1 5973 6089 -32 22 0 0 0 chr10 121114326 121114348 -19202417 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 121114839 121114863 -19201902 + AT_rich Low_complexity Low_complexity 1 24 0 2247 104 0 0 chr10 121114945 121115244 -19201521 + AluSc SINE Alu 4 302 -7 23 0 0 0 chr10 121115631 121115654 -19201111 + AT_rich Low_complexity Low_complexity 1 23 0 1673 169 63 3 chr10 121116107 121116439 -19200326 - L1MB4 LINE L1 -1 6179 5828 203 152 0 0 chr10 121117628 121117661 -19199104 + GA-rich Low_complexity Low_complexity 1 33 0 235 389 0 9 chr10 121117789 121117902 -19198863 - MIR SINE MIR -115 147 36 23 54 0 0 chr10 121120323 121120360 -19196405 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 121121086 121121109 -19195656 + AT_rich Low_complexity Low_complexity 1 23 0 225 274 129 40 chr10 121122300 121122424 -19194341 - MER5A DNA MER1_type -12 177 43 338 317 120 12 chr10 121122745 121122966 -19193799 + MIR SINE MIR 9 254 -8 27 29 0 0 chr10 121122967 121123001 -19193764 + AT_rich Low_complexity Low_complexity 1 34 0 26 107 0 0 chr10 121123051 121123154 -19193611 + AT_rich Low_complexity Low_complexity 1 103 0 23 86 0 0 chr10 121124899 121124957 -19191808 + AT_rich Low_complexity Low_complexity 1 58 0 7922 189 11 32 chr10 121124957 121127305 -19189460 - L1MB1 LINE L1 -186 6684 4386 577 196 1 3 chr10 121127377 121127506 -19189259 - L1MA8 LINE L1 -158 6147 6007 2126 218 43 10 chr10 121127520 121128097 -19188668 - L1MB1 LINE L1 -2451 4397 3802 1533 234 62 0 chr10 121128119 121128508 -19188257 - L1MB1 LINE L1 -4255 2594 2182 280 271 0 83 chr10 121128509 121128653 -19188112 + L1MD2 LINE L1 5964 6095 -264 260 305 212 20 chr10 121128835 121128986 -19187779 + MER5A DNA MER1_type 10 189 0 412 313 48 7 chr10 121129553 121129700 -19187065 + MIR SINE MIR 84 236 -26 1443 257 82 10 chr10 121129955 121130635 -19186130 - L1M4 LINE L1 -3043 3103 2375 269 292 47 94 chr10 121131958 121132129 -19184636 + MIR SINE MIR 2 164 -98 1289 219 45 99 chr10 121132130 121132669 -19184096 - MLT1E1 LTR MaLR -2 652 69 21 36 0 0 chr10 121132911 121132939 -19183826 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr10 121134197 121134226 -19182539 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr10 121134331 121134352 -19182413 + AT_rich Low_complexity Low_complexity 1 21 0 570 223 0 0 chr10 121134707 121134810 -19181955 + MER58B DNA MER1_type 234 336 -5 26 50 0 0 chr10 121134995 121135035 -19181730 + AT_rich Low_complexity Low_complexity 1 40 0 29 90 0 0 chr10 121135156 121135234 -19181531 + AT_rich Low_complexity Low_complexity 1 78 0 22 0 0 0 chr10 121136068 121136090 -19180675 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 121136138 121136164 -19180601 + AT_rich Low_complexity Low_complexity 1 26 0 26 50 0 0 chr10 121136664 121136704 -19180061 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr10 121138018 121138049 -19178716 + AT_rich Low_complexity Low_complexity 1 31 0 356 285 113 23 chr10 121138599 121138901 -19177864 - L1P LINE L1 -2341 3805 3477 1224 210 35 0 chr10 121138944 121139234 -19177531 - L1MA8 LINE L1 -1 6290 5991 26 30 0 0 chr10 121139248 121139281 -19177484 + AT_rich Low_complexity Low_complexity 1 33 0 21214 99 13 48 chr10 121139336 121145788 -19170977 - L1PA7 LINE L1 0 6154 12 205 191 5 113 chr10 121146036 121146230 -19170535 + T-rich Low_complexity Low_complexity 5 177 0 2348 97 0 0 chr10 121146237 121146535 -19170230 - AluY SINE Alu -13 298 1 418 164 36 0 chr10 121146551 121146661 -19170104 + L1MA7 LINE L1 6178 6291 0 5466 157 13 9 chr10 121146699 121147773 -19168992 - L1PA15 LINE L1 0 7603 6528 * 8963 234 37 40 chr10 121147770 121150911 -19165854 - L1PA15 LINE L1 -1837 5747 2635 892 303 34 10 chr10 121150927 121151221 -19165544 - L1PA15 LINE L1 -7271 310 10 2087 131 0 0 chr10 121151250 121151548 -19165217 - AluSc SINE Alu -11 298 1 22 94 0 0 chr10 121152246 121152310 -19164455 + AT_rich Low_complexity Low_complexity 1 64 0 1506 142 19 78 chr10 121153006 121153373 -19163392 - MER4A LTR ERV1 0 664 261 545 163 0 10 chr10 121153373 121153471 -19163294 - MER4A LTR ERV1 -566 98 2 15029 115 55 30 chr10 121153478 121154143 -19162622 - MER4A-int LTR ERV1 -3 6595 5949 2172 100 10 0 chr10 121154143 121154433 -19162332 - AluSp SINE Alu -20 293 1 15029 115 55 30 chr10 121154433 121154513 -19162252 - MER4A-int LTR ERV1 -649 5949 5873 2214 118 0 16 chr10 121154513 121154826 -19161939 - AluSq SINE Alu -5 308 1 15029 115 55 30 chr10 121154826 121156358 -19160407 - MER4A-int LTR ERV1 -725 5873 4235 1001 88 0 0 chr10 121156358 121156495 -19160270 + L1PA7 LINE L1 6015 6151 -3 15029 115 55 30 chr10 121156495 121156906 -19159859 - MER4A-int LTR ERV1 -2363 4235 3836 11282 124 150 113 chr10 121156904 121160454 -19156311 - MER4A-int LTR ERV1 -2917 3681 1 * 1724 134 161 75 chr10 121160457 121160829 -19155936 - MER4A LTR ERV1 0 664 261 581 141 0 10 chr10 121160829 121160928 -19155837 - MER4A LTR ERV1 -566 98 1 618 321 101 0 chr10 121161122 121161331 -19155434 + MIR SINE MIR 33 262 0 12549 164 40 13 chr10 121161535 121162910 -19153855 + Tigger1 DNA MER2_type 2 1466 -952 2563 121 33 19 chr10 121162910 121163332 -19153433 + MSTA LTR MaLR 1 428 0 12549 164 40 13 chr10 121163332 121164311 -19152454 + Tigger1 DNA MER2_type 1466 2418 0 22 0 0 0 chr10 121164878 121164900 -19151865 + AT_rich Low_complexity Low_complexity 1 22 0 33 66 0 0 chr10 121165282 121165343 -19151422 + AT_rich Low_complexity Low_complexity 1 61 0 36 53 0 0 chr10 121166093 121166150 -19150615 + AT_rich Low_complexity Low_complexity 1 57 0 419 298 62 56 chr10 121166150 121166311 -19150454 - L2 LINE L2 0 3272 3111 1617 98 27 4 chr10 121166524 121166749 -19150016 - MER30 DNA MER1_type 0 230 1 334 304 73 26 chr10 121166977 121167168 -19149597 + L2 LINE L2 3114 3313 0 21 0 0 0 chr10 121168389 121168410 -19148355 + AT_rich Low_complexity Low_complexity 1 21 0 1301 333 110 42 chr10 121169239 121170617 -19146148 + L2 LINE L2 1752 3227 -86 351 260 130 18 chr10 121171012 121171181 -19145584 - L1MDa LINE L1 -3901 2639 2452 521 247 81 16 chr10 121171748 121171934 -19144831 - L1MDa LINE L1 -6177 544 347 318 338 93 18 chr10 121172068 121172293 -19144472 - MIR SINE MIR -16 246 5 24 32 0 0 chr10 121172617 121172648 -19144117 + AT_rich Low_complexity Low_complexity 1 31 0 350 238 12 100 chr10 121173326 121173486 -19143279 + MER103 DNA DNA 2 147 -19 543 307 39 7 chr10 121173669 121173822 -19142943 - MER91A DNA MER1_type -22 174 17 1055 231 9 5 chr10 121173940 121174161 -19142604 - MER58A DNA MER1_type -2 222 1 636 285 186 22 chr10 121174163 121174486 -19142279 - L3 LINE CR1 -108 1469 1094 2075 101 11 0 chr10 121174731 121175043 -19141722 - AluSx SINE Alu 0 317 3 1982 210 56 0 chr10 121175753 121176162 -19140603 - MSTB1 LTR MaLR 0 432 1 2463 228 225 14 chr10 121176162 121177470 -19139295 - MSTB1-int LTR MaLR 0 1651 1 2213 168 68 15 chr10 121177470 121177880 -19138885 - MSTB1 LTR MaLR 0 432 1 24 77 0 0 chr10 121177953 121178005 -19138760 + AT_rich Low_complexity Low_complexity 1 52 0 1008 282 58 58 chr10 121178118 121178533 -19138232 - HERV16 LTR ERVL -2670 2326 1912 1742 343 30 12 chr10 121178809 121179556 -19137209 - HERV16 LTR ERVL -3421 1575 816 1437 276 30 12 chr10 121180282 121180709 -19136056 - LTR16B LTR ERVL -11 453 19 1846 164 3 7 chr10 121180709 121181013 -19135752 - AluJb SINE Alu -9 303 1 555 165 0 24 chr10 121181362 121181489 -19135276 + CT-rich Low_complexity Low_complexity 1 124 0 764 103 0 8 chr10 121181592 121181718 -19135047 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 3095 254 34 10 chr10 121181779 121182859 -19133906 - L1 LINE L1 -2496 3650 2545 3006 209 66 4 chr10 121183393 121184077 -19132688 - L1MB8 LINE L1 -10 6168 5443 42082 35 26 2 chr10 121184273 121190272 -19126493 - L1PA3 LINE L1 0 6155 8 1236 190 23 82 chr10 121190273 121190445 -19126320 - L1MA7 LINE L1 -184 6107 5965 2223 114 0 0 chr10 121190445 121190742 -19126023 - AluSx SINE Alu -15 297 1 1236 190 23 82 chr10 121190742 121190921 -19125844 - L1MA7 LINE L1 -326 5965 5777 2339 168 9 9 chr10 121191191 121191625 -19125140 - L1MA7 LINE L1 -527 5764 5331 2292 134 31 14 chr10 121191625 121191983 -19124782 + THE1B LTR MaLR 1 364 0 10045 97 7 2 chr10 121191983 121193550 -19123215 + THE1B-int LTR MaLR 1 1580 0 2280 128 33 19 chr10 121193550 121193909 -19122856 + THE1B LTR MaLR 1 364 0 8671 242 44 32 chr10 121193909 121196064 -19120701 - L1 LINE L1 -811 5571 3351 186 43 0 0 chr10 121196064 121196087 -19120678 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8671 242 44 32 chr10 121196087 121198013 -19118752 - L1 LINE L1 -3031 3351 1448 1091 192 10 5 chr10 121198013 121198211 -19118554 - AluJo SINE Alu -9 303 105 1043 184 0 0 chr10 121198212 121198375 -19118390 - AluJo SINE Alu -139 173 11 1958 277 74 33 chr10 121198381 121198861 -19117904 - L1M2c LINE L1 -4523 1512 1053 1892 154 50 0 chr10 121198861 121199198 -19117567 + THE1A LTR MaLR 1 354 -1 1958 277 74 33 chr10 121199198 121200262 -19116503 - L1M2c LINE L1 -4982 1053 317 256 324 52 37 chr10 121200309 121200445 -19116320 - L1M2c LINE L1 -5501 454 317 764 103 0 8 chr10 121201131 121201257 -19115508 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 3095 254 34 10 chr10 121201318 121202398 -19114367 - L1 LINE L1 -2496 3650 2545 3006 209 66 4 chr10 121202932 121203616 -19113149 - L1MB8 LINE L1 -10 6168 5443 43787 37 5 2 chr10 121203812 121209947 -19106818 - L1PA3 LINE L1 0 6155 3 195 349 115 21 chr10 121210479 121210671 -19106094 + L2 LINE L2 2297 2506 -808 3145 231 52 21 chr10 121210920 121211995 -19104770 - L1ME1 LINE L1 -18 6148 5021 1755 152 64 9 chr10 121211995 121212325 -19104440 + MER7A DNA MER2_type 1 346 0 3145 231 52 21 chr10 121212325 121212499 -19104266 - L1ME1 LINE L1 -1145 5021 4854 1246 51 6 0 chr10 121213159 121213344 -19103421 + L1PA5 LINE L1 5987 6172 0 2228 102 7 3 chr10 121213664 121213957 -19102808 + AluSg1 SINE Alu 1 294 -15 922 277 67 9 chr10 121214145 121214722 -19102043 + L1ME3A LINE L1 5023 5634 -528 620 261 216 12 chr10 121214724 121215127 -19101638 + L1ME3A LINE L1 5673 6157 -13 278 289 16 47 chr10 121215825 121215864 -19100901 + MLT1L LTR MaLR 490 529 -86 1369 209 43 63 chr10 121215864 121216262 -19100503 - MLT1B LTR MaLR 0 390 1 278 289 16 47 chr10 121216262 121216350 -19100415 + MLT1L LTR MaLR 529 613 -2 204 233 0 0 chr10 121217076 121217119 -19099646 + CT-rich Low_complexity Low_complexity 2 44 0 2210 148 72 15 chr10 121217504 121217909 -19098856 - MSTA LTR MaLR 0 428 1 1096 44 0 0 chr10 121218312 121218447 -19098318 + AluY SINE Alu 175 309 -2 199 217 22 0 chr10 121218447 121218493 -19098272 - L2 LINE L2 -2 3311 3265 22 0 0 0 chr10 121218540 121218562 -19098203 + AT_rich Low_complexity Low_complexity 1 22 0 517 259 60 38 chr10 121219103 121219288 -19097477 + MIR SINE MIR 68 256 -6 211 226 113 0 chr10 121219413 121219466 -19097299 + L3 LINE CR1 1054 1112 -465 2263 96 0 16 chr10 121219466 121219778 -19096987 + AluSc SINE Alu 1 307 -2 2353 196 42 25 chr10 121219782 121220397 -19096368 - L1M3 LINE L1 -619 5561 4927 523 67 27 0 chr10 121220397 121220472 -19096293 + MADE1 DNA Mariner 4 80 0 2353 196 42 25 chr10 121220472 121220645 -19096120 - L1M3 LINE L1 -1253 4927 4759 336 245 42 56 chr10 121220996 121221139 -19095626 + MLT1L LTR MaLR 142 282 -333 223 347 0 13 chr10 121221425 121221500 -19095265 - L2 LINE L2 -191 3081 3008 794 256 41 0 chr10 121221550 121221769 -19094996 - L1 LINE L1 -906 5240 5013 * 2489 187 39 4 chr10 121221763 121222276 -19094489 + L1MA9 LINE L1 5278 5808 -504 203 161 63 7 chr10 121222285 121222428 -19094337 + (TA)n Simple_repeat Simple_repeat 1 151 0 351 0 0 0 chr10 121222431 121222470 -19094295 + (CA)n Simple_repeat Simple_repeat 2 40 0 2152 160 60 25 chr10 121222471 121222941 -19093824 + L1MA9 LINE L1 5795 6280 -32 407 301 81 23 chr10 121223568 121223741 -19093024 - MLT1J LTR MaLR -318 193 11 202 354 39 23 chr10 121223786 121223916 -19092849 - L2 LINE L2 -663 2651 2520 2002 109 0 60 chr10 121224460 121224831 -19091934 - AluSx SINE Alu 0 353 1 25 31 0 0 chr10 121226299 121226331 -19090434 + AT_rich Low_complexity Low_complexity 1 32 0 2310 252 63 44 chr10 121226641 121227775 -19088990 + L1ME3A LINE L1 5000 6161 -9 1125 238 15 11 chr10 121227798 121228197 -19088568 + L1MEc LINE L1 586 1056 -5487 1272 214 37 3 chr10 121228213 121228507 -19088258 + L1MB7 LINE L1 5526 5829 -349 244 188 82 82 chr10 121228507 121228592 -19088173 + Tigger3(Golem) DNA MER2_type 1 85 -2944 * 5232 147 71 54 chr10 121228564 121229212 -19087553 + Tigger3(Golem) DNA MER2_type 1880 2558 -471 2138 113 0 0 chr10 121229212 121229547 -19087218 - AluSg SINE Alu 0 335 1 5232 147 71 54 chr10 121229547 121230027 -19086738 + Tigger3(Golem) DNA MER2_type 2558 3028 -1 1139 192 83 0 chr10 121230049 121230325 -19086440 + L1MB7 LINE L1 5852 6150 -34 1458 244 75 24 chr10 121230344 121230894 -19085871 + L1MEc LINE L1 1300 1877 -4663 2110 222 77 37 chr10 121231001 121231160 -19085605 - L1MC4 LINE L1 -266 7776 7625 546 138 9 46 chr10 121231160 121231269 -19085496 - L1PA10 LINE L1 -11 6157 6053 2110 222 77 37 chr10 121231269 121231790 -19084975 - L1MC4 LINE L1 -417 7625 6905 213 39 0 0 chr10 121231790 121231816 -19084949 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2110 222 77 37 chr10 121231816 121231926 -19084839 - L1MC4 LINE L1 -1137 6905 6801 245 261 9 108 chr10 121231931 121232042 -19084723 - L1MC4 LINE L1 -1295 6747 6648 422 274 9 9 chr10 121232069 121232182 -19084583 - MER58 DNA MER1_type -101 114 2 42265 40 26 4 chr10 121232821 121239010 -19077755 - L1PA2 LINE L1 0 6155 1 398 264 77 39 chr10 121239167 121239375 -19077390 + L1MEc LINE L1 2514 2729 -3992 520 346 15 30 chr10 121239427 121239690 -19077075 + LTR33 LTR ERVL 24 282 -239 794 321 23 5 chr10 121239698 121240089 -19076676 - L1M3de LINE L1 -5519 372 3 248 310 0 23 chr10 121242312 121242399 -19074366 + (CATA)n Simple_repeat Simple_repeat 4 88 0 227 256 0 0 chr10 121242830 121242873 -19073892 - LTR40b LTR ERVL -419 43 1 3354 139 38 19 chr10 121242930 121243557 -19073208 + L1PA16 LINE L1 5523 6161 -5 2366 142 28 12 chr10 121243138 121243562 -19073203 + L1PA16 LINE L1 5736 6166 0 1393 213 15 42 chr10 121243579 121243951 -19072814 - L1MB8 LINE L1 -12 6166 5812 384 103 0 0 chr10 121244139 121244197 -19072568 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 1597 205 30 7 chr10 121244198 121244496 -19072269 - MSTD LTR MaLR -3 393 89 1702 179 7 3 chr10 121244496 121244804 -19071961 + L1 LINE L1 4661 4969 -1177 23 33 0 0 chr10 121245484 121245514 -19071251 + AT_rich Low_complexity Low_complexity 1 30 0 1720 176 7 0 chr10 121245737 121246036 -19070729 - AluSx SINE Alu 0 301 1 546 259 28 76 chr10 121246184 121246435 -19070330 - L1ME3A LINE L1 -5 6165 5927 248 169 0 17 chr10 121246436 121246495 -19070270 + CT-rich Low_complexity Low_complexity 3 60 0 2126 122 0 0 chr10 121247334 121247628 -19069137 - AluSq SINE Alu -19 294 1 1316 148 152 4 chr10 121248793 121249056 -19067709 - AluSq SINE Alu -11 302 1 527 310 75 27 chr10 121249507 121249984 -19066781 + L1MC3 LINE L1 4801 5300 -846 1945 144 3 7 chr10 121249986 121250278 -19066487 + AluSx SINE Alu 1 291 -21 219 36 0 0 chr10 121250278 121250306 -19066459 + (TA)n Simple_repeat Simple_repeat 2 29 0 297 394 44 6 chr10 121250312 121250492 -19066273 + L3 LINE CR1 1388 1574 -3 358 378 47 9 chr10 121251055 121251288 -19065477 + MIR SINE MIR 8 249 -13 697 167 193 0 chr10 121251781 121251931 -19064834 - MER20 DNA MER1_type 0 219 41 22 56 0 0 chr10 121252805 121252841 -19063924 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 121253400 121253421 -19063344 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 121253683 121253704 -19063061 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 121254341 121254369 -19062396 + AT_rich Low_complexity Low_complexity 1 28 0 1394 149 141 0 chr10 121254820 121255152 -19061613 + MER44D DNA MER2_type 1 609 0 228 364 45 78 chr10 121257496 121257650 -19059115 - L2 LINE L2 -1 3271 3123 431 173 37 0 chr10 121258055 121258136 -19058629 - MER53 DNA DNA -104 85 2 386 289 25 50 chr10 121258148 121258307 -19058458 - MLT1K LTR MaLR -432 156 2 331 332 119 18 chr10 121258316 121258542 -19058223 + L1MC3 LINE L1 5584 5832 -1976 408 257 44 18 chr10 121258560 121258673 -19058092 - L2 LINE L2 -1 3312 3197 963 225 26 16 chr10 121259160 121259467 -19057298 - HsTC2 DNA Tc2 -25 1873 1564 706 242 20 0 chr10 121259475 121259628 -19057137 - HsTC2 DNA Tc2 -1742 156 1 254 330 38 0 chr10 121259628 121259734 -19057031 + MIR SINE MIR 153 262 0 403 261 27 80 chr10 121259829 121259881 -19056884 + MER5B DNA MER1_type 1 54 -124 237 108 0 0 chr10 121259881 121259918 -19056847 + (TG)n Simple_repeat Simple_repeat 2 38 0 403 261 27 80 chr10 121259918 121260053 -19056712 + MER5B DNA MER1_type 54 178 0 284 254 9 79 chr10 121260053 121260167 -19056598 - L2 LINE L2 -533 2781 2676 1487 275 118 4 chr10 121260194 121260685 -19056080 - L2 LINE L2 -952 2362 1816 1081 313 13 6 chr10 121260687 121260781 -19055984 + L1M4b LINE L1 11 103 -6756 2370 91 0 0 chr10 121260781 121261088 -19055677 + AluSc SINE Alu 3 309 0 1081 313 13 6 chr10 121261088 121261147 -19055618 + L1M4b LINE L1 103 160 -6699 4132 107 16 8 chr10 121261147 121261782 -19054983 - MER51C LTR ERV1 0 640 1 1081 313 13 6 chr10 121261782 121262216 -19054549 + L1M4b LINE L1 160 669 -6190 287 258 0 0 chr10 121262310 121262372 -19054393 + L1MC3 LINE L1 6674 6735 -1050 300 27 0 0 chr10 121262424 121262461 -19054304 + (TG)n Simple_repeat Simple_repeat 1 37 0 209 161 0 0 chr10 121262461 121262492 -19054273 + (CG)n Simple_repeat Simple_repeat 1 31 0 604 208 8 2 chr10 121262495 121262629 -19054136 - L1MC3 LINE L1 -935 6850 6736 347 183 0 0 chr10 121262603 121262663 -19054102 + L1MC4 LINE L1 6759 6818 -1224 * 2072 212 38 6 chr10 121262667 121263200 -19053565 + L1MB5 LINE L1 3885 4434 -1712 1101 103 4 3 chr10 121263222 121263501 -19053264 - THE1B LTR MaLR 0 364 1 3480 226 70 32 chr10 121263503 121264386 -19052379 + L1MB5 LINE L1 4454 5301 -873 1175 210 131 7 chr10 121264386 121264691 -19052074 - MER2 DNA MER2_type 0 344 2 531 43 0 0 chr10 121264692 121264762 -19052003 + (TG)n Simple_repeat Simple_repeat 1 70 0 3480 226 70 32 chr10 121264762 121265494 -19051271 + L1MB5 LINE L1 5300 6141 -33 1908 126 47 60 chr10 121265530 121265910 -19050855 + THE1C LTR MaLR 1 375 0 652 156 92 0 chr10 121265910 121266051 -19050714 + L1M4 LINE L1 4618 4771 -1375 900 110 7 15 chr10 121266072 121266208 -19050557 - MSTB1 LTR MaLR -2 430 296 27 0 0 0 chr10 121267103 121267130 -19049635 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 121268807 121268829 -19047936 + AT_rich Low_complexity Low_complexity 1 22 0 671 229 0 0 chr10 121269132 121269263 -19047502 - FLAM_C SINE Alu 0 133 3 29 47 0 0 chr10 121271330 121271373 -19045392 + AT_rich Low_complexity Low_complexity 1 43 0 40 79 0 0 chr10 121271733 121271822 -19044943 + AT_rich Low_complexity Low_complexity 1 89 0 470 219 54 28 chr10 121271998 121272169 -19044596 - MER104 DNA Tc2 0 180 1 998 284 149 9 chr10 121272169 121272726 -19044039 - L1MC4a LINE L1 -1902 5906 5272 1848 199 0 16 chr10 121272822 121273032 -19043733 - MLT1A1 LTR MaLR 0 365 162 1792 126 0 8 chr10 121273032 121273287 -19043478 - AluSg SINE Alu -57 253 1 1848 199 0 16 chr10 121273287 121273447 -19043318 - MLT1A1 LTR MaLR -203 162 1 270 340 82 56 chr10 121273682 121273950 -19042815 + MLT1G1 LTR MaLR 138 412 -183 364 304 39 7 chr10 121274044 121274178 -19042587 - MLT1G1 LTR MaLR -186 356 210 449 320 96 25 chr10 121274396 121274790 -19041975 - L1MC4a LINE L1 -1201 4945 4524 31 58 0 0 chr10 121274815 121274867 -19041898 + AT_rich Low_complexity Low_complexity 1 52 0 555 248 132 12 chr10 121274986 121275244 -19041521 + L1MB7 LINE L1 5887 6175 -9 739 310 35 63 chr10 121275258 121275779 -19040986 - L2 LINE L2 -623 2691 2206 3791 174 47 44 chr10 121275827 121276650 -19040115 - LTR1B LTR ERV1 0 826 1 327 196 5 53 chr10 121277201 121277390 -19039375 + (TA)n Simple_repeat Simple_repeat 1 180 0 29 0 0 0 chr10 121278136 121278165 -19038600 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr10 121278650 121278681 -19038084 + AT_rich Low_complexity Low_complexity 1 31 0 405 184 0 0 chr10 121278682 121278758 -19038007 - L1MA9 LINE L1 -38 6510 6435 11718 216 37 17 chr10 121278759 121280635 -19036130 - L1MA9 LINE L1 -141 6407 4570 333 0 0 0 chr10 121280635 121280672 -19036093 + (TG)n Simple_repeat Simple_repeat 2 38 0 11718 216 37 17 chr10 121280672 121282985 -19033780 - L1MA9 LINE L1 -1978 4570 2119 4167 211 134 25 chr10 121283358 121283417 -19033348 - Charlie1a DNA MER1_type -1403 1358 1307 1802 106 0 4 chr10 121283417 121283697 -19033068 - AluSc SINE Alu 0 314 36 4167 211 134 25 chr10 121283697 121284857 -19031908 - Charlie1a DNA MER1_type -1454 1307 4 1039 260 69 46 chr10 121284894 121286085 -19030680 - L1ME1 LINE L1 -6 6229 4943 1913 241 67 38 chr10 121286101 121287132 -19029633 - L1ME1 LINE L1 -3157 3058 2026 1998 142 3 0 chr10 121287139 121287448 -19029317 + AluSq SINE Alu 1 310 -3 583 296 42 11 chr10 121287458 121287647 -19029118 - MER21B LTR ERV1 -51 812 618 2215 77 31 0 chr10 121287649 121287935 -19028830 + AluY SINE Alu 1 295 -16 863 265 121 19 chr10 121288125 121288389 -19028376 - MER21B LTR ERV1 -535 328 38 274 294 29 0 chr10 121288397 121288465 -19028300 - MER21B LTR ERV1 -775 88 19 693 295 108 16 chr10 121288632 121289066 -19027699 - L1ME1 LINE L1 -4454 1942 1469 753 288 111 64 chr10 121289066 121289906 -19026859 - L1ME1 LINE L1 -5495 901 23 21 57 0 0 chr10 121290031 121290066 -19026699 + AT_rich Low_complexity Low_complexity 1 35 0 235 268 0 18 chr10 121290512 121290568 -19026197 + Tigger5 DNA MER2_type 1 55 -2268 * 439 200 20 40 chr10 121290563 121290663 -19026102 + Tigger5 DNA MER2_type 2225 2322 -1 216 0 0 0 chr10 121290837 121290861 -19025904 + (TAA)n Simple_repeat Simple_repeat 2 25 0 263 269 105 34 chr10 121292512 121292699 -19024066 - MIR SINE MIR -28 180 6 33 73 0 0 chr10 121294017 121294085 -19022680 + AT_rich Low_complexity Low_complexity 1 68 0 493 273 80 7 chr10 121295122 121295272 -19021493 - MIR SINE MIR -94 168 8 422 283 38 19 chr10 121295618 121295777 -19020988 + MIR SINE MIR 96 257 -5 21 71 0 0 chr10 121296603 121296645 -19020120 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr10 121296883 121296904 -19019861 + AT_rich Low_complexity Low_complexity 1 21 0 2257 100 0 3 chr10 121296995 121297296 -19019469 + AluSq SINE Alu 1 300 -13 333 285 86 57 chr10 121297405 121297756 -19019009 - MER65A LTR ERV1 0 445 85 * 451 197 17 140 chr10 121297737 121297915 -19018850 - MER65B LTR ERV1 -375 156 1 630 275 57 63 chr10 121297915 121298264 -19018501 - MER65B-int LTR ERV1 -1 4870 4524 6215 246 27 30 chr10 121298264 121300538 -19016227 - L1 LINE L1 -2202 4646 2459 1870 160 144 0 chr10 121300555 121300929 -19015836 + MSTA LTR MaLR 1 428 0 8227 188 24 15 chr10 121300929 121302380 -19014385 + MSTA-int LTR MaLR 1 1470 -181 2127 134 0 0 chr10 121302380 121302685 -19014080 - AluSc SINE Alu -4 305 1 8227 188 24 15 chr10 121302685 121302868 -19013897 + MSTA-int LTR MaLR 1470 1650 -1 1875 176 141 0 chr10 121302876 121303245 -19013520 + MSTA LTR MaLR 8 428 0 3647 274 29 28 chr10 121303245 121304620 -19012145 - L1 LINE L1 -4492 2357 982 2808 191 47 47 chr10 121304703 121305887 -19010878 - MER65-int LTR ERV1 -2377 2494 1715 2013 198 118 141 chr10 121304704 121305033 -19011732 - LTR57-int LTR ERVL -3771 1572 1237 * 1601 185 94 47 chr10 121305033 121305438 -19011327 - MSTB LTR MaLR -2 424 1 2013 198 118 141 chr10 121305438 121306282 -19010483 - LTR57-int LTR ERVL -4106 1237 374 279 0 0 0 chr10 121306282 121306313 -19010452 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 360 0 0 0 chr10 121306312 121306352 -19010413 + (GA)n Simple_repeat Simple_repeat 2 41 0 2013 198 118 141 chr10 121306313 121306358 -19010407 - LTR57-int LTR ERVL -4969 374 422 1643 176 14 0 chr10 121306358 121306637 -19010128 - AluJb SINE Alu -29 283 1 2013 198 118 141 chr10 121306637 121306756 -19010009 - LTR57-int LTR ERVL -4920 423 303 334 277 51 102 chr10 121307141 121307610 -19009155 - MER65A LTR ERV1 0 445 1 363 256 67 61 chr10 121307610 121307679 -19009086 + L1M4 LINE L1 2295 2362 -3784 2335 62 0 0 chr10 121307679 121307970 -19008795 + AluY SINE Alu 1 291 -20 363 256 67 61 chr10 121307970 121308080 -19008685 + L1M4 LINE L1 2362 2475 -3671 480 298 68 23 chr10 121308427 121308823 -19007942 + L1M4 LINE L1 2895 3308 -2838 711 174 43 141 chr10 121308913 121309218 -19007547 - ORSL DNA AcHobo 0 275 1 28 86 0 0 chr10 121309233 121309303 -19007462 + AT_rich Low_complexity Low_complexity 1 70 0 799 243 29 33 chr10 121309567 121309777 -19006988 - MER63A DNA MER1_type -1 209 1 22 70 0 0 chr10 121311764 121311807 -19004958 + AT_rich Low_complexity Low_complexity 1 43 0 2255 213 73 7 chr10 121312062 121312403 -19004362 - L1MB5 LINE L1 0 6174 5778 1864 158 3 3 chr10 121312403 121312694 -19004071 - AluSx SINE Alu -17 295 5 2255 213 73 7 chr10 121312694 121312924 -19003841 - L1MB5 LINE L1 -396 5778 5565 265 193 0 18 chr10 121312941 121312998 -19003767 + AluSg SINE Alu 45 100 -200 3913 272 89 18 chr10 121313152 121315754 -19001011 - L1 LINE L1 -3186 3546 1145 18512 35 2 0 chr10 121315988 121319020 -18997745 - L1PA3 LINE L1 -2 6153 3118 852 203 62 62 chr10 121370873 121371129 -18945636 + MIR SINE MIR 7 262 0 180 244 158 37 chr10 121371607 121371689 -18945076 + MIR SINE MIR 43 134 -74 521 284 93 21 chr10 121372991 121373185 -18943580 - MIR SINE MIR -35 227 20 696 128 0 0 chr10 121374095 121374197 -18942568 - L1PA16 LINE L1 -324 5842 5741 691 256 73 66 chr10 121374489 121374892 -18941873 + MLT1G LTR MaLR 1 388 -207 355 282 159 25 chr10 121375127 121375290 -18941475 + MLT1J2 LTR MaLR 266 450 0 299 333 123 0 chr10 121375325 121375439 -18941326 - L2 LINE L2 -2 3270 3143 214 372 112 28 chr10 121375586 121375871 -18940894 + L2 LINE L2 2872 3180 -92 1295 189 66 33 chr10 121375930 121376273 -18940492 + AluJo SINE Alu 1 353 0 680 231 125 23 chr10 121376564 121376780 -18939985 - MIR SINE MIR -2 260 23 186 103 0 0 chr10 121377401 121377430 -18939335 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 267 353 0 0 chr10 121377881 121377949 -18938816 + L2 LINE L2 3205 3272 0 2172 196 19 58 chr10 121378041 121378223 -18938542 - LTR55 LTR ERV -5 543 355 2874 60 0 0 chr10 121378223 121378576 -18938189 + THE1A LTR MaLR 1 353 -2 2172 196 19 58 chr10 121378576 121378958 -18937807 - LTR55 LTR ERV -193 355 1 234 228 15 31 chr10 121380887 121380983 -18935782 - MLT1I-int LTR MaLR -1309 62 1 900 316 36 15 chr10 121380983 121381318 -18935447 - MLT1I LTR MaLR 0 409 68 752 260 39 10 chr10 121382180 121382384 -18934381 - MIR SINE MIR -50 212 3 465 287 36 51 chr10 121382990 121383088 -18933677 + MIR SINE MIR 58 153 -109 1892 148 7 13 chr10 121383088 121383398 -18933367 + AluSx SINE Alu 1 308 -4 465 287 36 51 chr10 121383398 121383494 -18933271 + MIR SINE MIR 153 249 -13 288 0 0 0 chr10 121383501 121383533 -18933232 + (ATG)n Simple_repeat Simple_repeat 2 33 0 655 284 22 44 chr10 121383696 121383921 -18932844 + MIR SINE MIR 2 221 -41 30 93 0 0 chr10 121383931 121384017 -18932748 + AT_rich Low_complexity Low_complexity 1 86 0 180 0 0 0 chr10 121384380 121384400 -18932365 + (T)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr10 121385046 121385081 -18931684 + AT_rich Low_complexity Low_complexity 1 35 0 322 363 62 26 chr10 121385414 121385607 -18931158 + MIR SINE MIR 1 200 -62 787 272 26 0 chr10 121386129 121386320 -18930445 + MIR SINE MIR 53 248 -14 38 51 0 0 chr10 121386901 121386960 -18929805 + AT_rich Low_complexity Low_complexity 1 59 0 301 301 49 49 chr10 121387353 121387476 -18929289 + L2 LINE L2 3191 3313 0 610 239 7 0 chr10 121387694 121387849 -18928916 - L1MA10 LINE L1 0 6334 6179 262 114 15 0 chr10 121387872 121387921 -18928844 - L1M3 LINE L1 -721 5450 5395 2358 189 29 48 chr10 121387952 121388509 -18928256 - L1MB1 LINE L1 -50 6139 5594 * 5356 169 26 18 chr10 121388505 121390100 -18926665 - L1MA4A LINE L1 0 7365 5756 623 163 0 159 chr10 121390090 121390329 -18926436 - L1MA4A LINE L1 -3024 4184 3984 * 1780 279 91 90 chr10 121390351 121391054 -18925711 - L1MA4A LINE L1 -5922 1287 595 2080 151 0 37 chr10 121391054 121391404 -18925361 - MER1B DNA MER1_type 0 337 1 1780 279 91 90 chr10 121391404 121392000 -18924765 - L1MA4A LINE L1 -6614 595 1 1591 147 16 105 chr10 121392005 121392277 -18924488 - L1M2 LINE L1 -701 5611 5316 1825 160 0 0 chr10 121392277 121392558 -18924207 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr10 121392561 121392589 -18924176 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 1591 147 16 105 chr10 121392589 121392882 -18923883 - L1M2 LINE L1 -998 5314 5072 57 28 0 0 chr10 121393437 121393508 -18923257 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr10 121393530 121393558 -18923207 + AT_rich Low_complexity Low_complexity 1 28 0 1459 203 23 13 chr10 121394360 121394665 -18922100 - Tigger3(Golem) DNA MER2_type -1 3028 2721 296 269 0 13 chr10 121394664 121394742 -18922023 - Tigger3(Golem) DNA MER2_type -2948 81 5 * 342 45 0 0 chr10 121395001 121395045 -18921720 + (CA)n Simple_repeat Simple_repeat 2 45 0 387 60 0 0 chr10 121395753 121395803 -18920962 + (CA)n Simple_repeat Simple_repeat 1 50 0 1396 106 8 51 chr10 121396628 121396740 -18920025 - L1PA12 LINE L1 -280 5888 5790 2171 71 50 3 chr10 121396740 121397022 -18919743 - AluY SINE Alu -12 299 5 1396 106 8 51 chr10 121397022 121397146 -18919619 - L1PA12 LINE L1 -378 5790 5662 1067 174 0 0 chr10 121397146 121397318 -18919447 + AluSg/x SINE Alu 130 301 -9 2489 95 38 23 chr10 121397318 121397529 -18919236 - L1PA12 LINE L1 -493 5675 5454 1658 131 44 87 chr10 121397529 121397919 -18918846 - THE1C LTR MaLR 0 375 3 2489 95 38 23 chr10 121397919 121398098 -18918667 - L1PA12 LINE L1 -714 5454 5279 1802 164 35 0 chr10 121398167 121398453 -18918312 - AluJb SINE Alu -16 296 1 2270 100 0 0 chr10 121399325 121399625 -18917140 + AluSc SINE Alu 1 300 -9 702 258 52 111 chr10 121399729 121400326 -18916439 + L1 LINE L1 4279 4840 -1306 239 79 26 0 chr10 121400472 121400510 -18916255 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5571 139 9 10 chr10 121400521 121401501 -18915264 - L1PA16 LINE L1 -9 6157 5179 * 10896 232 31 13 chr10 121401500 121404279 -18912486 + L1PA16 LINE L1 2354 5182 -964 28 61 0 0 chr10 121404507 121404556 -18912209 + AT_rich Low_complexity Low_complexity 1 49 0 286 294 67 8 chr10 121404679 121404875 -18911890 + L1 LINE L1 4803 5007 -1139 1822 192 67 13 chr10 121404937 121405327 -18911438 - MLT1C LTR MaLR -52 415 5 291 205 0 62 chr10 121405663 121405775 -18910990 + CT-rich Low_complexity Low_complexity 1 105 0 1709 218 65 39 chr10 121406844 121407334 -18909431 - MLT1D LTR MaLR -2 503 1 21 0 0 0 chr10 121407947 121407968 -18908797 + AT_rich Low_complexity Low_complexity 1 21 0 778 269 95 21 chr10 121408428 121408766 -18907999 - L1ME4a LINE L1 -209 5912 5550 32 26 0 0 chr10 121408877 121408916 -18907849 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr10 121409296 121409326 -18907439 + AT_rich Low_complexity Low_complexity 1 30 0 283 309 48 69 chr10 121411691 121411879 -18904886 + L3 LINE CR1 345 528 -1049 2139 121 0 3 chr10 121413412 121413717 -18903048 + AluSx SINE Alu 1 304 -8 458 271 176 4 chr10 121414086 121414271 -18902494 - L2 LINE L2 -8 3305 3067 441 50 0 0 chr10 121414271 121414331 -18902434 + (TG)n Simple_repeat Simple_repeat 1 60 0 458 271 176 4 chr10 121414331 121414389 -18902376 - L2 LINE L2 -246 3067 3020 788 0 11 0 chr10 121414519 121414611 -18902154 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 1413 214 48 12 chr10 121415072 121415403 -18901362 - MER61A LTR ERV1 0 343 1 185 330 20 95 chr10 121416450 121416650 -18900115 + L3 LINE CR1 700 884 -693 333 256 50 58 chr10 121416659 121416780 -18899985 + L3 LINE CR1 1443 1562 -15 242 331 25 41 chr10 121418284 121418405 -18898360 + L2 LINE L2 2848 2966 -347 2244 94 0 16 chr10 121418405 121418714 -18898051 - AluSc SINE Alu -5 304 1 194 238 217 21 chr10 121419071 121419214 -18897551 + L2 LINE L2 3008 3178 -135 1910 133 7 13 chr10 121420722 121421023 -18895742 - AluSx SINE Alu -13 299 1 209 296 41 0 chr10 121422172 121422260 -18894505 + (CATATA)n Simple_repeat Simple_repeat 4 98 -7 2603 85 8 0 chr10 121422260 121422612 -18894153 - THE1A LTR MaLR 0 355 1 209 296 41 0 chr10 121422612 121422621 -18894144 + (CATATA)n Simple_repeat Simple_repeat 98 105 0 2030 99 16 36 chr10 121424382 121424705 -18892060 - AluSq SINE Alu 0 313 1 502 296 61 20 chr10 121425303 121425499 -18891266 - MIR SINE MIR -6 256 53 388 243 63 18 chr10 121425526 121425637 -18891128 - MIR SINE MIR -100 162 47 21 0 0 0 chr10 121426702 121426723 -18890042 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 121427234 121427263 -18889502 + AT_rich Low_complexity Low_complexity 1 29 0 2223 67 0 67 chr10 121428846 121429175 -18887590 + AluY SINE Alu 1 307 -4 358 346 68 30 chr10 121430022 121430288 -18886477 - L1MEd LINE L1 -3679 2450 2175 315 0 0 0 chr10 121430355 121430390 -18886375 + (TG)n Simple_repeat Simple_repeat 2 36 0 2154 122 10 0 chr10 121430834 121431130 -18885635 + AluSx SINE Alu 7 305 -7 342 317 185 8 chr10 121431161 121431404 -18885361 - HAL1 LINE L1 -845 1662 1377 2942 70 24 55 chr10 121431586 121432044 -18884721 - MLT2A1 LTR ERVL 0 444 1 29 0 0 0 chr10 121432479 121432508 -18884257 + AT_rich Low_complexity Low_complexity 1 29 0 2148 213 18 59 chr10 121432516 121433060 -18883705 - L1MB8 LINE L1 -50 6128 5607 1003 224 17 4 chr10 121433062 121433294 -18883471 - L1MB8 LINE L1 -1231 4915 4681 312 253 11 129 chr10 121433375 121433553 -18883212 - MIR SINE MIR -55 207 51 337 276 96 32 chr10 121434650 121434806 -18881959 - L1ME4a LINE L1 -6 6115 5950 302 342 74 8 chr10 121435046 121435303 -18881462 - L1ME4a LINE L1 -493 5628 5355 21 0 0 0 chr10 121435700 121435721 -18881044 + AT_rich Low_complexity Low_complexity 1 21 0 236 225 150 0 chr10 121436110 121436190 -18880575 - L1MEd LINE L1 -5983 136 45 2147 176 142 28 chr10 121436257 121436750 -18880015 - MER44D DNA MER2_type -1 604 1 754 270 82 65 chr10 121436882 121437544 -18879221 - L1MEd LINE L1 -4866 1253 581 1273 131 0 0 chr10 121437604 121437795 -18878970 - AluSg/x SINE Alu 0 310 120 226 243 28 84 chr10 121437932 121437997 -18878768 - L1MEd LINE L1 -5973 146 88 1545 178 7 40 chr10 121437997 121438301 -18878464 + AluJb SINE Alu 6 299 -13 226 243 28 84 chr10 121438301 121438342 -18878423 - L1MEd LINE L1 -6031 88 46 2314 113 0 0 chr10 121438974 121439285 -18877480 - AluSx SINE Alu -1 311 1 22 56 0 0 chr10 121439288 121439324 -18877441 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 121439405 121439426 -18877339 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 121439798 121439822 -18876943 + AT_rich Low_complexity Low_complexity 1 24 0 508 245 19 0 chr10 121441236 121441342 -18875423 + FLAM_A SINE Alu 1 108 -34 216 0 0 0 chr10 121441342 121441366 -18875399 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2090 120 7 0 chr10 121441366 121441657 -18875108 - AluSx SINE Alu -19 293 1 243 0 0 0 chr10 121441673 121441700 -18875065 + (CA)n Simple_repeat Simple_repeat 2 28 0 213 304 104 9 chr10 121442373 121442488 -18874277 - L2 LINE L2 -565 2749 2624 326 356 90 31 chr10 121442724 121443078 -18873687 - L2 LINE L2 -1235 2079 1705 199 328 53 30 chr10 121443243 121443374 -18873391 - L2 LINE L2 -1878 1436 1303 561 304 75 70 chr10 121443381 121443676 -18873089 + L2 LINE L2 2435 2734 -580 2683 93 3 13 chr10 121443676 121444053 -18872712 - THE1C LTR MaLR -2 373 1 561 304 75 70 chr10 121444053 121444211 -18872554 + L2 LINE L2 2734 2890 -424 414 287 166 0 chr10 121445797 121445954 -18870811 - L1ME1 LINE L1 -72 6094 5912 642 80 0 0 chr10 121445955 121446043 -18870722 - AluSc SINE Alu -19 290 203 1638 242 68 20 chr10 121446043 121446519 -18870246 - L1ME1 LINE L1 -252 5914 5422 326 49 0 0 chr10 121446525 121446566 -18870199 - MADE1 DNA Mariner -39 41 1 412 213 9 37 chr10 121446935 121447043 -18869722 - L1MC5 LINE L1 -105 7856 7752 1705 223 8 14 chr10 121448522 121448889 -18867876 - MLT1A1 LTR MaLR 0 365 1 27 0 0 0 chr10 121449401 121449428 -18867337 + AT_rich Low_complexity Low_complexity 1 27 0 435 247 77 59 chr10 121450625 121450795 -18865970 + MIR SINE MIR 32 204 -58 195 333 0 68 chr10 121450864 121450981 -18865784 - L2 LINE L2 0 3272 3164 21 36 0 0 chr10 121451075 121451103 -18865662 + AT_rich Low_complexity Low_complexity 1 28 0 1650 268 113 29 chr10 121451185 121451781 -18864984 + L1MC4a LINE L1 4881 5022 -1124 2110 213 72 2 chr10 121451781 121452251 -18864514 + MLT1D LTR MaLR 1 503 -2 1650 268 113 29 chr10 121452251 121452661 -18864104 + L1MC4a LINE L1 5022 5396 -750 471 182 35 98 chr10 121453187 121453330 -18863435 - L2 LINE L2 -9 3304 3171 327 181 0 42 chr10 121453329 121453401 -18863364 - L2 LINE L2 -1366 1948 1880 * 335 331 103 0 chr10 121453788 121453933 -18862832 + MIR SINE MIR 33 192 -70 32101 98 16 6 chr10 121454007 121459677 -18857088 - L1PA7 LINE L1 -7 6462 629 189 365 12 0 chr10 121459836 121459921 -18856844 - MIR SINE MIR -67 195 110 813 198 17 17 chr10 121460140 121460312 -18856453 - MER20 DNA MER1_type -18 201 30 1983 113 3 58 chr10 121460504 121460815 -18855950 - AluSg SINE Alu -16 294 1 29 28 0 0 chr10 121461227 121461263 -18855502 + AT_rich Low_complexity Low_complexity 1 36 0 600 317 44 9 chr10 121462497 121462724 -18854041 + MIR SINE MIR 13 247 -15 242 272 104 48 chr10 121464017 121464142 -18852623 - L2 LINE L2 0 3313 3182 198 208 0 0 chr10 121464557 121464605 -18852160 + (TA)n Simple_repeat Simple_repeat 2 49 0 5761 158 42 39 chr10 121464952 121465482 -18851283 - L1MD3 LINE L1 0 7995 7468 2056 128 3 6 chr10 121465482 121465795 -18850970 - AluSx SINE Alu 0 312 1 5761 158 42 39 chr10 121465795 121466642 -18850123 - L1MD3 LINE L1 -527 7468 4971 455 197 27 39 chr10 121466645 121466789 -18849976 - L1ME4a LINE L1 -296 5825 5671 398 251 111 64 chr10 121466817 121466988 -18849777 + L2 LINE L2 3132 3310 -3 455 204 0 0 chr10 121466998 121467086 -18849679 - L1ME4a LINE L1 -2147 5661 5574 552 171 329 0 chr10 121467099 121467239 -18849526 - MER20 DNA MER1_type 0 219 34 326 254 127 45 chr10 121467255 121467389 -18849376 - L1ME4a LINE L1 -2248 5560 5416 578 244 23 45 chr10 121467650 121467826 -18848939 + MIR SINE MIR 15 186 -76 241 204 0 41 chr10 121468626 121468675 -18848090 + MER5B DNA MER1_type 2 48 -130 357 312 78 13 chr10 121468925 121469079 -18847686 + MIR SINE MIR 43 206 -56 200 215 0 46 chr10 121469527 121469592 -18847173 + T-rich Low_complexity Low_complexity 1 62 0 24 0 0 0 chr10 121469698 121469722 -18847043 + AT_rich Low_complexity Low_complexity 1 24 0 283 247 247 0 chr10 121470293 121470390 -18846375 + MIR SINE MIR 129 249 -13 622 290 57 40 chr10 121470419 121470669 -18846096 + MIR SINE MIR 11 262 0 702 247 30 6 chr10 121470765 121470931 -18845834 + MER69A DNA AcHobo 1 170 -7 229 208 81 57 chr10 121471946 121472037 -18844728 - MIR SINE MIR -63 145 50 2512 50 0 0 chr10 121472049 121472347 -18844418 - AluY SINE Alu -13 298 1 200 140 53 18 chr10 121473351 121473408 -18843357 + (TA)n Simple_repeat Simple_repeat 1 59 0 390 21 0 0 chr10 121473411 121473458 -18843307 + (TG)n Simple_repeat Simple_repeat 2 48 0 579 239 119 6 chr10 121474367 121474526 -18842239 - MER45A DNA AcHobo 0 178 2 1990 96 11 0 chr10 121475005 121475277 -18841488 + AluSq SINE Alu 35 309 -4 2287 93 7 10 chr10 121476497 121476807 -18839958 + AluSq SINE Alu 1 309 -4 716 265 54 22 chr10 121477231 121477543 -18839222 + MLT1H1 LTR MaLR 3 371 -224 557 100 0 0 chr10 121477696 121477776 -18838989 + AluS SINE Alu 1 80 -232 270 250 51 102 chr10 121477809 121478025 -18838740 + L1MC4 LINE L1 7828 8032 -10 208 338 31 68 chr10 121479435 121479657 -18837108 - L2 LINE L2 -468 2846 2633 782 245 31 0 chr10 121479787 121479946 -18836819 - MER97a DNA MER1_type? -730 164 1 271 341 80 33 chr10 121479950 121480249 -18836516 - L2 LINE L2 -835 2479 2167 5983 159 35 15 chr10 121480706 121481760 -18835005 + L1M1 LINE L1 1 1075 -6490 2793 243 69 17 chr10 121481810 121482654 -18834111 + L1ME3A LINE L1 5275 6162 -8 227 323 55 55 chr10 121483424 121483551 -18833214 + MIR3 SINE MIR 13 139 -69 234 0 0 0 chr10 121484048 121484074 -18832691 + (CA)n Simple_repeat Simple_repeat 1 26 0 325 328 93 16 chr10 121484186 121484369 -18832396 + MIR SINE MIR 20 216 -46 2163 83 0 0 chr10 121484550 121484827 -18831938 + AluSc SINE Alu 1 277 -32 183 42 0 0 chr10 121484828 121484852 -18831913 + (CAA)n Simple_repeat Simple_repeat 1 24 0 419 300 93 0 chr10 121484856 121485006 -18831759 + MIR SINE MIR 29 192 -70 183 254 127 16 chr10 121485060 121485123 -18831642 - L2 LINE L2 -36 3277 3208 1960 199 100 2 chr10 121485313 121485734 -18831031 - MLT1C LTR MaLR 0 467 6 6845 174 44 35 chr10 121485743 121487097 -18829668 - MLT1C-int LTR MaLR -5 1366 2 1739 201 76 11 chr10 121487098 121487532 -18829233 - MLT1C LTR MaLR 0 467 6 919 218 55 71 chr10 121488523 121488879 -18827886 + MLT1D LTR MaLR 20 390 0 258 279 215 68 chr10 121491008 121491259 -18825506 - L3 LINE CR1 -92 1485 1198 670 295 16 58 chr10 121491870 121492128 -18824637 + L2 LINE L2 2904 3150 -163 239 259 74 83 chr10 121492150 121492258 -18824507 - L1ME3A LINE L1 -15 6155 6049 21 36 0 0 chr10 121493986 121494014 -18822751 + AT_rich Low_complexity Low_complexity 1 28 0 211 171 0 0 chr10 121494480 121494521 -18822244 - L2 LINE L2 0 3313 3273 738 193 0 102 chr10 121494585 121494782 -18821983 + L1MB7 LINE L1 5995 6171 -13 2061 234 88 30 chr10 121495048 121495685 -18821080 - L1MC4 LINE L1 -131 7911 7238 2172 192 158 4 chr10 121495691 121496216 -18820549 - L1MC4 LINE L1 -960 7082 6477 2262 117 81 34 chr10 121496301 121496710 -18820055 - MSTA LTR MaLR 0 428 1 327 343 43 50 chr10 121497284 121497424 -18819341 + L2 LINE L2 3129 3267 -5 1341 220 31 50 chr10 121498022 121498340 -18818425 - MER45C DNA AcHobo -3 950 639 680 277 24 83 chr10 121498340 121498676 -18818089 - L2 LINE L2 -62 3251 2936 2454 57 0 0 chr10 121498734 121499032 -18817733 - AluY SINE Alu -13 298 1 2169 117 0 0 chr10 121499630 121499929 -18816836 - AluSg SINE Alu -1 309 11 208 388 0 0 chr10 121499958 121500038 -18816727 + L2 LINE L2 3185 3264 -8 328 322 29 84 chr10 121500649 121500753 -18816012 - MIR SINE MIR -34 228 120 2176 112 7 3 chr10 121500753 121501058 -18815707 + AluSp SINE Alu 1 306 -7 328 322 29 84 chr10 121501058 121501192 -18815573 - MIR SINE MIR -142 120 3 236 279 0 29 chr10 121501206 121501274 -18815491 + GA-rich Low_complexity Low_complexity 4 69 0 1128 217 122 21 chr10 121501434 121501761 -18815004 + MLT1A1 LTR MaLR 5 364 -1 253 132 94 0 chr10 121502430 121502483 -18814282 + MER110A LTR ERV1 5 62 -406 859 208 75 68 chr10 121502483 121502762 -18814003 + MER110A LTR ERV1 32 312 -156 351 0 0 0 chr10 121502836 121502875 -18813890 + (CA)n Simple_repeat Simple_repeat 2 40 0 432 228 18 9 chr10 121502929 121503043 -18813722 + MER110A LTR ERV1 352 466 -2 329 349 121 26 chr10 121504816 121505048 -18811717 - MIR SINE MIR -7 255 2 1673 204 14 27 chr10 121505126 121505493 -18811272 + MLT1A1 LTR MaLR 4 365 0 763 255 132 0 chr10 121507499 121507711 -18809054 + MIR SINE MIR 2 241 -21 1959 149 3 26 chr10 121507933 121508242 -18808523 - AluSx SINE Alu -10 302 1 1744 224 53 87 chr10 121509181 121512635 -18804130 - L1ME1 LINE L1 -338 7247 3735 318 225 14 49 chr10 121512656 121512798 -18803967 - L1ME4a LINE L1 -1 6120 5984 559 168 0 0 chr10 121512823 121512924 -18803841 - L1MB3 LINE L1 -9 6174 6074 759 241 40 10 chr10 121512924 121513179 -18803586 - L1ME1 LINE L1 -3900 3665 3487 268 389 23 38 chr10 121513179 121513321 -18803444 + L2 LINE L2 2826 2964 -308 2025 121 3 3 chr10 121513321 121513603 -18803162 - AluSq SINE Alu -31 282 1 268 389 23 38 chr10 121513603 121513722 -18803043 + L2 LINE L2 2964 3083 -189 27 49 0 0 chr10 121513744 121513785 -18802980 + AT_rich Low_complexity Low_complexity 1 41 0 863 37 0 0 chr10 121513958 121514065 -18802700 + L1PA4 LINE L1 6041 6147 -8 27 0 0 0 chr10 121514065 121514092 -18802673 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr10 121514662 121514686 -18802079 + AT_rich Low_complexity Low_complexity 1 24 0 402 354 9 0 chr10 121515591 121515749 -18801016 + MIR SINE MIR 21 179 -56 467 33 16 0 chr10 121516224 121516285 -18800480 + (TG)n Simple_repeat Simple_repeat 2 63 0 246 231 0 0 chr10 121517212 121517264 -18799501 - L2 LINE L2 0 3313 3262 237 33 0 0 chr10 121517437 121517467 -18799298 + (CA)n Simple_repeat Simple_repeat 2 31 0 197 345 106 9 chr10 121518234 121518347 -18798418 - L2 LINE L2 -4 3309 3186 350 340 40 7 chr10 121519627 121519777 -18796988 - L2 LINE L2 -6 3266 3112 271 324 164 31 chr10 121519827 121520145 -18796620 + L2 LINE L2 2051 2410 -904 484 263 129 29 chr10 121521521 121521647 -18795118 + MIR SINE MIR 2 151 -111 2148 139 18 32 chr10 121521647 121522027 -18794738 + THE1C LTR MaLR 1 375 0 484 263 129 29 chr10 121522027 121522071 -18794694 + MIR SINE MIR 151 189 -73 977 107 0 0 chr10 121522104 121522253 -18794512 - L1PA7 LINE L1 -4015 2131 1983 * 23185 79 15 12 chr10 121522252 121526265 -18790500 + L1PA7 LINE L1 2128 6150 -4 682 304 198 5 chr10 121527331 121527836 -18788929 - LTR28 LTR ERV1 -455 1300 6 2294 75 3 0 chr10 121528859 121529174 -18787591 + AluSp SINE Alu 1 316 0 23 68 0 0 chr10 121530315 121530359 -18786406 + AT_rich Low_complexity Low_complexity 1 44 0 216 0 0 0 chr10 121531002 121531026 -18785739 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 258 220 0 0 chr10 121531233 121531283 -18785482 + L2 LINE L2 3261 3310 -3 309 283 22 83 chr10 121532411 121532591 -18784174 + MIR SINE MIR 25 193 -69 664 336 5 10 chr10 121533970 121534178 -18782587 - MIR SINE MIR -4 258 52 796 269 70 0 chr10 121534387 121534629 -18782136 - MIR SINE MIR 0 262 4 288 350 88 12 chr10 121535236 121535396 -18781369 + L2 LINE L2 181 352 -2962 698 256 153 22 chr10 121536564 121536885 -18779880 + LTR16A LTR ERVL 87 449 -1 1409 186 162 32 chr10 121537217 121537625 -18779140 - MLT1C LTR MaLR 0 467 7 423 0 0 0 chr10 121538293 121538340 -18778425 + (CA)n Simple_repeat Simple_repeat 1 47 0 321 227 0 0 chr10 121538698 121538773 -18777992 + MER116 DNA Mariner 6 80 0 403 327 25 19 chr10 121538786 121538948 -18777817 - MIR SINE MIR -18 244 82 665 271 88 4 chr10 121541237 121541477 -18775288 - MIR SINE MIR 0 262 3 609 259 93 0 chr10 121543269 121543431 -18773334 - MIR3 SINE MIR -1 207 31 737 278 52 20 chr10 121543552 121543804 -18772961 + MIR SINE MIR 3 262 0 197 276 153 31 chr10 121543903 121544001 -18772764 - L2 LINE L2 0 3272 3163 339 326 62 72 chr10 121544112 121544403 -18772362 - L2 LINE L2 -58 3214 2927 584 267 212 9 chr10 121544665 121544882 -18771883 + MIR SINE MIR 2 262 0 201 368 0 0 chr10 121547510 121547586 -18769179 + (TG)n Simple_repeat Simple_repeat 1 76 0 664 249 171 23 chr10 121547611 121547828 -18768937 + MIR SINE MIR 14 262 0 25 0 0 0 chr10 121547828 121547853 -18768912 + AT_rich Low_complexity Low_complexity 1 25 0 1550 176 60 15 chr10 121547947 121548258 -18768507 + L1MA9 LINE L1 5912 6241 -71 351 44 0 0 chr10 121548258 121548303 -18768462 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 1550 176 60 15 chr10 121548303 121548327 -18768438 + L1MA9 LINE L1 6241 6262 -50 206 343 38 9 chr10 121550443 121550548 -18766217 - MIR SINE MIR -46 216 109 329 270 54 9 chr10 121550991 121551102 -18765663 + L1MC4 LINE L1 7926 8041 -1 23 0 0 0 chr10 121552175 121552198 -18764567 + AT_rich Low_complexity Low_complexity 1 23 0 648 256 56 47 chr10 121553280 121553495 -18763270 - MIR SINE MIR -36 226 10 644 217 37 12 chr10 121553762 121553923 -18762842 + MIR3 SINE MIR 24 188 -20 484 271 86 38 chr10 121554799 121555009 -18761756 - L2 LINE L2 -2 3311 3092 285 297 14 81 chr10 121555894 121556042 -18760723 + MIR3 SINE MIR 71 208 0 374 278 83 22 chr10 121556206 121556386 -18760379 + L2 LINE L2 3122 3312 -1 2449 93 3 0 chr10 121556963 121557275 -18759490 + AluSq SINE Alu 1 313 0 1783 129 8 80 chr10 121557353 121557716 -18759049 - MER1B DNA MER1_type 0 337 1 374 328 25 0 chr10 121557716 121557730 -18759035 - MIR SINE MIR -93 169 157 2645 145 2 36 chr10 121557730 121558179 -18758586 + Tigger2a DNA MER2_type 1 434 0 374 328 25 0 chr10 121558179 121558283 -18758482 - MIR SINE MIR -105 157 48 4235 98 11 10 chr10 121558911 121559532 -18757233 + L1PA10 LINE L1 5536 6157 -11 1632 178 27 38 chr10 121559708 121560073 -18756692 - MLT1A2 LTR MaLR -13 361 1 482 278 66 83 chr10 121561565 121561853 -18754912 - L3b LINE CR1 -193 1390 1108 766 181 0 8 chr10 121562653 121562786 -18753979 + FLAM_C SINE Alu 1 132 -11 4167 223 71 38 chr10 121563343 121564673 -18752092 + L1MC4a LINE L1 5412 6785 -1023 562 165 12 0 chr10 121664679 121664777 -18651988 + MLT1A1 LTR MaLR 260 344 -21 335 260 48 0 chr10 121664783 121664918 -18651847 + (TATATG)n Simple_repeat Simple_repeat 1 141 0 389 152 163 11 chr10 121664928 121665020 -18651745 - MLT1C LTR MaLR -356 111 6 1733 244 53 7 chr10 121666104 121666535 -18650230 + MLT1C LTR MaLR 8 458 -9 2214 173 51 29 chr10 121667049 121667313 -18649452 - L1ME2 LINE L1 -19 6145 5882 382 273 102 45 chr10 121667313 121667577 -18649188 - L1PB4 LINE L1 -276 5880 5602 217 324 27 0 chr10 121667649 121667723 -18649042 + MIR SINE MIR 37 112 -150 1457 218 23 25 chr10 121667817 121668171 -18648594 - MLT1A1 LTR MaLR -2 363 11 238 257 14 14 chr10 121668181 121668251 -18648514 + MIR SINE MIR 168 237 -25 495 296 75 49 chr10 121669379 121669646 -18647119 - L2 LINE L2 -5 3267 2994 1598 146 210 28 chr10 121669801 121670163 -18646602 - MSTA LTR MaLR 0 428 1 3347 181 20 28 chr10 121671497 121672150 -18644615 + L1MC3 LINE L1 6454 7101 -684 262 275 25 12 chr10 121672155 121672235 -18644530 + MLT1F1 LTR MaLR 45 125 -442 616 193 17 8 chr10 121672235 121672354 -18644411 + L1MC3 LINE L1 7190 7309 -476 599 181 105 8 chr10 121672354 121672487 -18644278 - MER7A DNA MER2_type -202 144 1 199 297 59 40 chr10 121672487 121672588 -18644177 + MIR SINE MIR 160 262 0 2121 128 3 0 chr10 121672611 121672909 -18643856 + AluSc SINE Alu 1 299 -10 417 20 0 0 chr10 121673228 121673278 -18643487 + (CA)n Simple_repeat Simple_repeat 1 50 0 220 322 140 28 chr10 121673797 121673940 -18642825 + MIR3 SINE MIR 41 199 -9 507 329 86 31 chr10 121775096 121775421 -18541344 - L2 LINE L2 -36 3277 2935 497 278 41 18 chr10 121775633 121775802 -18540963 + MIR SINE MIR 70 242 -20 229 280 178 17 chr10 121777255 121777373 -18539392 - L2 LINE L2 0 3272 3136 1176 194 4 26 chr10 121778534 121778761 -18538004 + AluJo SINE Alu 87 308 -4 428 280 88 8 chr10 121778761 121778886 -18537879 - MIR SINE MIR -122 140 6 2055 122 13 13 chr10 121779771 121780075 -18536690 + AluSx SINE Alu 1 304 -8 357 339 34 0 chr10 121780680 121780798 -18535967 - MER91A DNA MER1_type -57 139 18 242 278 150 23 chr10 121781134 121781267 -18535498 - MIR SINE MIR -112 150 1 187 310 136 32 chr10 121781915 121782070 -18534695 + L2 LINE L2 2914 3084 -188 1048 294 31 0 chr10 121782795 121783152 -18533613 + L1ME3 LINE L1 5627 5994 -168 380 253 92 23 chr10 121784961 121785135 -18531630 - L1ME4a LINE L1 -1 6120 5935 1831 60 13 0 chr10 121785739 121785971 -18530794 + AluSp SINE Alu 78 312 -1 238 256 47 0 chr10 121786267 121786353 -18530412 - L1ME4a LINE L1 -458 5663 5574 228 208 117 52 chr10 121786426 121786503 -18530262 - L2 LINE L2 0 3313 3232 * 416 271 173 8 chr10 121786480 121786613 -18530152 + MER5A DNA MER1_type 35 189 0 816 320 86 45 chr10 121786619 121786696 -18530069 + L2 LINE L2 2268 2340 -974 1770 167 21 56 chr10 121786696 121787074 -18529691 - MLT1A1 LTR MaLR 0 365 1 816 320 86 45 chr10 121787074 121787509 -18529256 + L2 LINE L2 2340 2801 -513 327 312 77 23 chr10 121787622 121787843 -18528922 + L2 LINE L2 3005 3237 -76 222 375 29 7 chr10 121787871 121788007 -18528758 + L2 LINE L2 2911 3049 -223 347 263 50 19 chr10 121788295 121788455 -18528310 - MLT1J1 LTR MaLR -279 167 3 991 115 57 25 chr10 121788760 121788917 -18527848 - AluSg/x SINE Alu -9 303 142 188 302 0 0 chr10 121789123 121789166 -18527599 - MIR SINE MIR -218 44 2 23 0 0 0 chr10 121792339 121792362 -18524403 + AT_rich Low_complexity Low_complexity 1 23 0 232 333 35 65 chr10 121792425 121792656 -18524109 - L2 LINE L2 -1286 2028 1805 189 354 13 0 chr10 121792829 121792908 -18523857 + MIR SINE MIR 72 151 -111 480 349 54 68 chr10 121795013 121795365 -18521400 - L2 LINE L2 -1 3271 2925 195 42 0 0 chr10 121795495 121795519 -18521246 + (CAT)n Simple_repeat Simple_repeat 3 26 0 363 309 74 60 chr10 121795899 121796235 -18520530 + L1MC/D LINE L1 4628 4968 -1178 529 295 30 17 chr10 121796512 121796550 -18520215 + L1MC/D LINE L1 5310 5346 -2462 234 0 0 0 chr10 121796550 121796576 -18520189 + (CATA)n Simple_repeat Simple_repeat 2 27 0 529 295 30 17 chr10 121796576 121796771 -18519994 + L1MC/D LINE L1 5346 5546 -2262 381 233 105 75 chr10 121796945 121797211 -18519554 - MER102a DNA MER1_type -10 320 47 311 309 15 29 chr10 121797214 121797350 -18519415 - L1ME4a LINE L1 -2297 5511 5378 2220 106 3 7 chr10 121797362 121797654 -18519111 - AluSc SINE Alu -18 291 1 2413 32 3 84 chr10 121798387 121798730 -18518035 - L1PA5 LINE L1 0 6154 5840 2273 108 3 0 chr10 121798730 121799037 -18517728 - AluSp SINE Alu -5 308 1 773 291 74 31 chr10 121799374 121799916 -18516849 + L1ME LINE L1 4672 5236 -910 1086 215 24 36 chr10 121799945 121800196 -18516569 - MIR SINE MIR -13 249 2 451 259 23 6 chr10 121800220 121800394 -18516371 + L1ME LINE L1 5259 5435 -735 194 0 0 37 chr10 121800949 121800976 -18515789 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 195 42 0 0 chr10 121801170 121801194 -18515571 + (A)n Simple_repeat Simple_repeat 1 24 0 1289 256 50 39 chr10 121803334 121803792 -18512973 - LTR16B LTR ERVL 0 464 2 1881 148 0 33 chr10 121804655 121804959 -18511806 - AluJb SINE Alu -18 294 1 290 366 0 0 chr10 121805197 121805290 -18511475 + L2 LINE L2 3168 3260 -12 24 32 0 0 chr10 121805598 121805629 -18511136 + AT_rich Low_complexity Low_complexity 1 31 0 252 271 85 8 chr10 121805772 121805901 -18510864 + MIR SINE MIR 103 241 -21 237 222 56 0 chr10 121806297 121806351 -18510414 - MIR SINE MIR -51 211 155 641 120 0 104 chr10 121806356 121806481 -18510284 - MER46A DNA MER2_type -124 112 1 516 312 6 13 chr10 121806481 121806638 -18510127 - MIR SINE MIR -105 157 2 58 15 0 0 chr10 121807140 121807205 -18509560 + AT_rich Low_complexity Low_complexity 1 65 0 1544 203 117 34 chr10 121807648 121808092 -18508673 - MLT1D LTR MaLR -24 481 1 278 298 32 34 chr10 121808648 121808772 -18507993 + MIR SINE MIR 45 166 -65 216 0 0 0 chr10 121809051 121809075 -18507690 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr10 121810428 121810450 -18506315 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1675 170 22 4 chr10 121810452 121810729 -18506036 - AluSx SINE Alu -30 282 1 207 0 0 0 chr10 121810739 121810762 -18506003 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 108 18 4 chr10 121810765 121811043 -18505722 - AluSq SINE Alu -31 282 1 231 191 22 146 chr10 121811047 121811136 -18505629 - MIR SINE MIR -63 145 68 216 0 0 0 chr10 121811846 121811870 -18504895 + (TG)n Simple_repeat Simple_repeat 1 24 0 606 280 34 17 chr10 121811871 121812110 -18504655 + L1ME LINE L1 5505 5747 -374 187 282 0 28 chr10 121812325 121812396 -18504369 + MIR SINE MIR 60 128 -134 537 310 56 13 chr10 121812802 121813034 -18503731 + MIR SINE MIR 21 262 0 2295 138 16 21 chr10 121813355 121813732 -18503033 + THE1C LTR MaLR 1 375 0 397 337 41 31 chr10 121814181 121814418 -18502347 + MIR SINE MIR 8 250 -12 2398 64 0 3 chr10 121814545 121814841 -18501924 + AluY SINE Alu 1 295 -16 223 276 67 38 chr10 121814865 121814970 -18501795 - L2 LINE L2 -54 3259 3152 242 325 84 39 chr10 121816530 121816618 -18500147 + MIR SINE MIR 49 148 -114 2405 71 13 13 chr10 121816618 121816926 -18499839 + AluY SINE Alu 1 308 -3 242 325 84 39 chr10 121816926 121816991 -18499774 + MIR SINE MIR 148 209 -53 2107 128 3 7 chr10 121817528 121817832 -18498933 - AluSx SINE Alu -9 303 1 187 316 140 35 chr10 121818078 121818192 -18498573 - L2 LINE L2 -3162 152 27 259 192 27 0 chr10 121819025 121819098 -18497667 + (TA)n Simple_repeat Simple_repeat 1 75 0 1729 189 23 9 chr10 121819098 121819447 -18497318 - MLT1A1 LTR MaLR -1 364 11 243 188 0 0 chr10 121820814 121820862 -18495903 + L1MA10 LINE L1 6280 6327 -7 21 57 0 0 chr10 121821787 121821822 -18494943 + AT_rich Low_complexity Low_complexity 1 35 0 812 228 6 6 chr10 121821901 121822059 -18494706 - FRAM SINE Alu -8 158 1 232 231 19 0 chr10 121822636 121822688 -18494077 + (TA)n Simple_repeat Simple_repeat 1 53 0 8307 116 8 2 chr10 121822711 121824740 -18492025 - L1PA8A LINE L1 -3 6128 4090 12559 112 9 7 chr10 121824743 121826779 -18489986 + L1PA8A LINE L1 2042 4081 -2065 238 281 0 0 chr10 121827479 121827536 -18489229 + MIR3 SINE MIR 149 205 -3 22 0 0 0 chr10 121830394 121830416 -18486349 + AT_rich Low_complexity Low_complexity 1 22 0 311 345 18 0 chr10 121833497 121833607 -18483158 + MLT1J1 LTR MaLR 210 321 -125 277 241 13 13 chr10 121833664 121833743 -18483022 + MLT1J2 LTR MaLR 361 439 -11 328 325 68 47 chr10 121833762 121833996 -18482769 + L2 LINE L2 2204 2442 -872 418 333 123 31 chr10 121834037 121834487 -18482278 + L2 LINE L2 2575 3058 -214 199 339 0 0 chr10 121834714 121834779 -18481986 + MIR SINE MIR 188 252 -10 458 291 70 40 chr10 121834970 121835169 -18481596 + MIR SINE MIR 8 212 -50 201 152 0 0 chr10 121835624 121835657 -18481108 + (ATG)n Simple_repeat Simple_repeat 3 35 0 225 191 250 0 chr10 121835659 121835727 -18481038 - MIR SINE MIR -7 255 171 630 183 0 69 chr10 121835753 121835884 -18480881 + L2 LINE L2 3187 3308 -5 25 75 0 0 chr10 121835978 121836031 -18480734 + AT_rich Low_complexity Low_complexity 1 53 0 3282 137 13 31 chr10 121837969 121838583 -18478182 + L1MA7 LINE L1 5687 6289 -2 2581 175 65 6 chr10 121839429 121839956 -18476809 - MER89 LTR ERV1 -1 558 1 329 0 24 0 chr10 121840102 121840143 -18476622 + (TC)n Simple_repeat Simple_repeat 2 43 0 184 335 130 42 chr10 121841676 121841960 -18474805 + L2 LINE L2 1751 2059 -1255 4885 151 15 21 chr10 121842648 121843678 -18473087 + L1MC2 LINE L1 5190 6317 -27 23 54 0 0 chr10 121843714 121843751 -18473014 + AT_rich Low_complexity Low_complexity 1 37 0 234 267 134 40 chr10 121847168 121847370 -18469395 + MIR SINE MIR 1 221 -41 285 336 9 9 chr10 121847950 121848060 -18468705 - MER5B DNA MER1_type -68 110 1 26 30 0 0 chr10 121850739 121850772 -18465993 + AT_rich Low_complexity Low_complexity 1 33 0 1915 125 9 58 chr10 121853914 121854241 -18462524 - AluSx SINE Alu -1 311 1 756 215 70 0 chr10 121854260 121854432 -18462333 - MER5A DNA MER1_type 0 189 6 233 263 270 0 chr10 121855389 121855541 -18461224 - MIR SINE MIR -21 241 49 195 42 0 0 chr10 121856429 121856453 -18460312 + (T)n Simple_repeat Simple_repeat 1 24 0 914 265 125 58 chr10 121858508 121859077 -18457688 - MLT1L LTR MaLR -2 613 7 1643 219 28 77 chr10 121859392 121859889 -18456876 + MLT1D LTR MaLR 29 501 -4 234 0 0 0 chr10 121861068 121861094 -18455671 + (TG)n Simple_repeat Simple_repeat 1 26 0 585 241 111 42 chr10 121862795 121863011 -18453754 + MIR SINE MIR 31 261 -1 246 269 240 12 chr10 121863339 121863510 -18453255 - MIR SINE MIR -21 241 32 195 318 34 0 chr10 121864968 121865056 -18451709 + MIR SINE MIR 21 111 -151 707 258 163 53 chr10 121865516 121865745 -18451020 - L2 LINE L2 -22 3291 3089 2090 119 68 14 chr10 121865745 121866098 -18450667 + THE1C LTR MaLR 4 375 0 707 258 163 53 chr10 121866098 121866387 -18450378 - L2 LINE L2 -224 3089 2709 1192 244 120 24 chr10 121866737 121867102 -18449663 - L1ME3A LINE L1 -2 6168 5747 2772 80 13 8 chr10 121867102 121867475 -18449290 - THE1C LTR MaLR 0 375 1 1192 244 120 24 chr10 121867475 121867577 -18449188 - L1ME3A LINE L1 -423 5747 5656 308 322 44 33 chr10 121867621 121867801 -18448964 - L2 LINE L2 -606 2708 2527 2107 138 0 25 chr10 121869630 121869808 -18446957 - AluSx SINE Alu -1 311 143 2189 114 0 3 chr10 121869808 121870107 -18446658 - AluSc SINE Alu -11 298 1 2107 138 0 25 chr10 121870107 121870247 -18446518 - AluSx SINE Alu -169 143 1 198 247 0 86 chr10 121870364 121870445 -18446320 - MIR SINE MIR -70 192 119 466 156 26 0 chr10 121871712 121871789 -18444976 + MADE1 DNA Mariner 2 80 0 1736 112 4 4 chr10 121872436 121872669 -18444096 - AluSq SINE Alu -80 233 1 2420 212 95 53 chr10 121872734 121873017 -18443748 - L1ME1 LINE L1 -15 6151 5881 729 144 8 40 chr10 121873017 121873142 -18443623 + FLAM_A SINE Alu 1 121 -12 2420 212 95 53 chr10 121873142 121873543 -18443222 - L1ME1 LINE L1 -285 5881 5438 622 114 0 0 chr10 121873576 121873664 -18443101 + MER89 LTR ERV1 1 88 -471 * 1394 202 118 6 chr10 121873638 121873960 -18442805 + MER89 LTR ERV1 197 554 -5 21 36 0 0 chr10 121876268 121876296 -18440469 + AT_rich Low_complexity Low_complexity 1 28 0 368 240 92 11 chr10 121877139 121877325 -18439440 + MIR SINE MIR 35 236 -26 494 281 58 12 chr10 121877442 121877613 -18439152 + MIR SINE MIR 78 256 -6 895 255 86 104 chr10 121878086 121878559 -18438206 - L1MC4a LINE L1 -1834 5974 5517 1886 161 13 0 chr10 121878559 121878858 -18437907 + AluJo SINE Alu 5 307 -5 895 255 86 104 chr10 121878858 121879117 -18437648 - L1MC4a LINE L1 -2291 5517 5255 202 204 0 19 chr10 121879271 121879325 -18437440 + L2 LINE L2 3009 3061 -211 206 284 104 30 chr10 121879409 121879543 -18437222 + MIR3 SINE MIR 16 159 -49 180 273 0 18 chr10 121879559 121879614 -18437151 + MER5B DNA MER1_type 33 86 -92 267 31 0 0 chr10 121879659 121879691 -18437074 + (TTA)n Simple_repeat Simple_repeat 1 32 0 2137 126 0 0 chr10 121879700 121879986 -18436779 - AluSx SINE Alu -26 286 1 199 324 111 59 chr10 121882072 121882367 -18434398 - L2 LINE L2 -50 3222 2907 424 200 303 0 chr10 121882367 121882512 -18434253 + MER5A DNA MER1_type 1 189 0 199 324 111 59 chr10 121882512 121882540 -18434225 - L2 LINE L2 -365 2907 2882 5051 246 56 10 chr10 121882742 121883477 -18433288 + L1ME1 LINE L1 2499 3199 -2947 186 43 0 0 chr10 121883477 121883500 -18433265 + (GA)n Simple_repeat Simple_repeat 2 24 0 5051 246 56 10 chr10 121883500 121884773 -18431992 + L1ME1 LINE L1 3199 4604 -1542 2234 219 76 50 chr10 121884798 121884938 -18431827 + MLT1E2 LTR MaLR 5 140 -486 2465 116 3 49 chr10 121884938 121885327 -18431438 - MER51B LTR ERV1 -2 375 5 2234 219 76 50 chr10 121885327 121885792 -18430973 + MLT1E2 LTR MaLR 140 626 0 3441 196 53 44 chr10 121885792 121886580 -18430185 + L1ME1 LINE L1 4627 5406 -760 1514 132 71 122 chr10 121886580 121886975 -18429790 - THE1C LTR MaLR 0 375 1 3441 196 53 44 chr10 121886975 121887552 -18429213 + L1ME1 LINE L1 5406 5976 -190 3044 173 15 2 chr10 121887552 121888094 -18428671 + L1MB3 LINE L1 5628 6176 -7 3441 196 53 44 chr10 121888094 121888215 -18428550 + L1ME1 LINE L1 5976 6130 -36 1451 187 0 78 chr10 121888215 121888536 -18428229 + AluJb SINE Alu 1 296 -16 3441 196 53 44 chr10 121888536 121888565 -18428200 + L1ME1 LINE L1 6130 6157 -9 1745 213 65 31 chr10 121889142 121889589 -18427176 - MLT1C LTR MaLR 0 467 6 339 307 10 0 chr10 121890385 121890486 -18426279 - MLT1L LTR MaLR -372 243 142 1355 229 104 3 chr10 121890653 121890981 -18425784 - MLT1A1 LTR MaLR -2 363 3 2452 129 8 11 chr10 121891340 121891712 -18425053 + THE1C LTR MaLR 5 375 0 287 265 0 0 chr10 121893253 121893321 -18423444 + L2 LINE L2 3174 3241 -31 797 244 61 0 chr10 121893842 121894006 -18422759 - MER63A DNA MER1_type 0 210 37 22 0 0 0 chr10 121895050 121895072 -18421693 + AT_rich Low_complexity Low_complexity 1 22 0 488 220 30 0 chr10 121895824 121895924 -18420841 + MLT1B LTR MaLR 1 103 -364 4096 95 13 4 chr10 121896008 121896557 -18420208 - MER41A LTR ERV1 0 554 1 515 248 78 126 chr10 121896557 121896851 -18419914 + MLT1B LTR MaLR 99 378 -12 542 175 92 62 chr10 121899389 121899646 -18417119 + MER33 DNA MER1_type 1 324 0 376 331 13 13 chr10 121899667 121899818 -18416947 - MIR SINE MIR -111 151 1 800 184 184 11 chr10 121901632 121901904 -18414861 - MER33 DNA MER1_type -4 320 2 1792 116 59 93 chr10 121901922 121902310 -18414455 + THE1C LTR MaLR 1 375 0 590 275 22 11 chr10 121902742 121902924 -18413841 + MIR SINE MIR 2 185 -77 1873 113 50 25 chr10 121903371 121903653 -18413112 - AluSc SINE Alu -20 289 1 341 177 0 44 chr10 121904488 121904601 -18412164 + CT-rich Low_complexity Low_complexity 5 112 0 945 218 10 5 chr10 121905771 121905973 -18410792 - MER3 DNA MER1_type 0 209 7 458 83 28 0 chr10 121906086 121906158 -18410607 - LTR37A LTR ERV1 -54 372 299 246 140 60 0 chr10 121906167 121906217 -18410548 - L1MB5 LINE L1 0 6174 6122 221 254 16 0 chr10 121906723 121906786 -18409979 + GA-rich Low_complexity Low_complexity 5 68 0 265 325 89 24 chr10 121906791 121906914 -18409851 - L2 LINE L2 -5 3267 3137 379 287 91 17 chr10 121907545 121907777 -18408988 - L1MC4a LINE L1 -298 5823 5659 13925 138 19 16 chr10 121907814 121909269 -18407496 + Tigger1 DNA MER2_type 10 1459 -959 1612 191 3 41 chr10 121909269 121909588 -18407177 + AluJo SINE Alu 1 307 -5 13925 138 19 16 chr10 121909588 121910185 -18406580 + Tigger1 DNA MER2_type 1459 2072 -346 2365 90 0 7 chr10 121910185 121910484 -18406281 + AluSp SINE Alu 1 297 -16 13925 138 19 16 chr10 121910484 121910652 -18406113 + Tigger1 DNA MER2_type 2072 2238 -180 2724 165 27 108 chr10 121910687 121911363 -18405402 - LTR9 LTR ERV1 0 794 1 691 186 35 0 chr10 121911364 121911509 -18405256 - L1M4 LINE L1 -1371 4775 4626 1375 254 138 39 chr10 121911575 121911789 -18404976 - L1MEc LINE L1 -4760 1636 1445 2291 63 4 0 chr10 121911789 121912081 -18404684 - AluY SINE Alu 0 309 17 1375 254 138 39 chr10 121912081 121912135 -18404630 - L1MEc LINE L1 -4951 1445 1398 2400 141 0 5 chr10 121912135 121912503 -18404262 + MER47A DNA MER2_type 1 366 0 1375 254 138 39 chr10 121912503 121913037 -18403728 - L1MEc LINE L1 -4998 1398 751 327 337 16 58 chr10 121913048 121913238 -18403527 + L2 LINE L2 3091 3272 0 367 217 106 61 chr10 121913285 121913465 -18403300 - MLT1F1 LTR MaLR 0 567 380 286 179 179 71 chr10 121913638 121913750 -18403015 - MLT1H1 LTR MaLR -339 210 44 2345 89 0 16 chr10 121915842 121916146 -18400619 + AluSg SINE Alu 1 299 -11 1747 72 64 16 chr10 121917361 121917611 -18399154 - L1PA10 LINE L1 0 6168 5907 221 189 0 0 chr10 121917745 121917782 -18398983 - L2 LINE L2 -19 3253 3217 701 280 73 53 chr10 121918106 121918556 -18398209 + L2 LINE L2 2854 3312 -1 206 227 0 0 chr10 121918842 121918886 -18397879 + MIR SINE MIR 216 259 -3 395 273 192 20 chr10 121920340 121920538 -18396227 + MIR SINE MIR 2 233 -29 2031 127 50 42 chr10 121920619 121920980 -18395785 - THE1B LTR MaLR 0 364 1 292 258 0 31 chr10 121921302 121921380 -18395385 + MER113 DNA MER1_type? 4 80 -441 1112 204 81 0 chr10 121921380 121921601 -18395164 - MER8 DNA MER2_type 0 239 1 292 258 0 31 chr10 121921601 121921619 -18395146 + MER113 DNA MER1_type? 80 97 -424 22 35 0 0 chr10 121922485 121922514 -18394251 + AT_rich Low_complexity Low_complexity 1 29 0 229 237 34 0 chr10 121924367 121924426 -18392339 + L3b LINE CR1 1325 1385 -198 233 290 203 0 chr10 121925054 121925192 -18391573 - Charlie8 DNA MER1_type -2240 177 12 1818 142 0 83 chr10 121925232 121925557 -18391208 - AluJo SINE Alu -14 298 1 250 330 9 27 chr10 121926597 121926709 -18390056 - MIR SINE MIR -19 243 134 202 294 76 22 chr10 121926680 121926772 -18389993 + L2 LINE L2 3128 3224 -48 * 1571 203 42 12 chr10 121926819 121927149 -18389616 + MLT2D LTR ERVL 1 340 -74 201 161 0 0 chr10 121927151 121927182 -18389583 + (TG)n Simple_repeat Simple_repeat 2 32 0 1256 204 34 36 chr10 121927182 121927552 -18389213 + L1MB8 LINE L1 5730 6101 -82 515 138 14 152 chr10 121927948 121928093 -18388672 + L1MB8 LINE L1 6054 6178 0 569 200 155 7 chr10 121928142 121928297 -18388468 + MER5A DNA MER1_type 9 186 -3 362 298 122 27 chr10 121928860 121929048 -18387717 - MIR SINE MIR -24 238 33 1432 239 140 10 chr10 121930028 121930434 -18386331 - MLT1H LTR MaLR -90 459 1 2152 144 0 3 chr10 121930648 121930961 -18385804 + AluSx SINE Alu 1 312 0 638 328 25 8 chr10 121931091 121931329 -18385436 + MIR SINE MIR 17 258 -4 809 172 7 20 chr10 121931683 121931834 -18384931 - L1MB8 LINE L1 -34 6144 5996 274 331 38 8 chr10 121931925 121932058 -18384707 - L2 LINE L2 -457 2857 2721 2754 17 0 0 chr10 121932067 121932361 -18384404 - AluYa5 SINE Alu -17 294 1 4249 238 23 22 chr10 121932367 121933904 -18382861 - L1MEc LINE L1 -2987 3142 1644 981 236 29 113 chr10 121933928 121934315 -18382450 - L1M4c LINE L1 -4452 2111 1648 13768 44 1 0 chr10 121934315 121936751 -18380014 - L1PA5 LINE L1 -7 6147 3714 981 236 29 113 chr10 121936751 121936976 -18379789 - L1M4c LINE L1 -4915 1648 1406 247 272 33 22 chr10 121937068 121937160 -18379605 - L1MDa LINE L1 -3404 2725 2633 412 275 106 18 chr10 121937271 121937562 -18379203 - L1MDa LINE L1 -4516 1613 1314 1142 154 58 34 chr10 121937799 121938007 -18378758 - MER20 DNA MER1_type -5 214 2 227 232 168 32 chr10 121938010 121938135 -18378630 - L1MDa LINE L1 -4993 1126 985 758 316 95 38 chr10 121938249 121939014 -18377751 - L1MDa LINE L1 -5297 822 14 200 238 0 0 chr10 121939493 121939535 -18377230 + (TAA)n Simple_repeat Simple_repeat 2 43 0 2353 244 59 19 chr10 121940104 121940752 -18376013 - L1MC4 LINE L1 -129 7913 7240 1863 238 125 16 chr10 121940754 121941312 -18375453 - L1MC4 LINE L1 -957 7085 6467 1052 187 109 0 chr10 121942067 121942324 -18374441 - L1MD3 LINE L1 0 7995 7711 1659 175 52 27 chr10 121943277 121943642 -18373123 + THE1C LTR MaLR 2 375 0 255 290 0 0 chr10 121943928 121943990 -18372775 - L1ME4a LINE L1 -70 6051 5990 187 296 0 0 chr10 121944132 121944186 -18372579 + MIR SINE MIR 206 259 -3 236 279 154 0 chr10 121945189 121945293 -18371472 + MIR SINE MIR 128 247 -15 487 227 163 23 chr10 121946077 121946249 -18370516 + MIR SINE MIR 59 254 -8 410 284 64 14 chr10 121946423 121946564 -18370201 + MER5A DNA MER1_type 7 154 -35 1866 125 50 0 chr10 121947915 121948195 -18368570 + AluJb SINE Alu 1 294 -18 327 239 0 23 chr10 121948330 121948418 -18368347 - MIR SINE MIR -80 182 97 2431 103 6 29 chr10 121948498 121949061 -18367704 + MER51A LTR ERV1 1 634 0 314 233 147 20 chr10 121949956 121950106 -18366659 + MIR SINE MIR 2 170 -92 834 88 0 0 chr10 121950672 121950786 -18365979 + AluY SINE Alu 198 311 0 7669 22 23 0 chr10 121951836 121952838 -18363927 - L1PA4 LINE L1 0 6155 5142 374 282 110 9 chr10 121953232 121953431 -18363334 + MIR SINE MIR 43 262 0 279 154 58 29 chr10 121953922 121954026 -18362739 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 354 130 41 53 chr10 121954038 121954207 -18362558 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 694 269 67 41 chr10 121954291 121954685 -18362080 - L1MC4 LINE L1 -302 5819 5537 552 212 128 64 chr10 121956004 121956207 -18360558 + MER20 DNA MER1_type 4 219 0 28 0 0 0 chr10 121957331 121957359 -18359406 + AT_rich Low_complexity Low_complexity 1 28 0 339 25 0 0 chr10 121957421 121957461 -18359304 + (TG)n Simple_repeat Simple_repeat 1 40 0 187 229 62 0 chr10 121958617 121958665 -18358100 - L2 LINE L2 -5 3267 3217 390 101 0 0 chr10 121963460 121963529 -18353236 + (CAT)n Simple_repeat Simple_repeat 2 70 0 242 286 158 23 chr10 121964345 121964478 -18352287 - MIR3 SINE MIR -45 163 13 189 238 24 0 chr10 121964571 121964613 -18352152 + MIR SINE MIR 120 162 -100 962 149 140 9 chr10 121965162 121965384 -18351381 - MER33 DNA MER1_type -24 300 50 409 273 116 8 chr10 121965571 121965692 -18351073 - L2 LINE L2 0 3272 3139 445 274 32 8 chr10 121965978 121966102 -18350663 - MIR3 SINE MIR -48 160 34 198 0 0 0 chr10 121970182 121970204 -18346561 + (T)n Simple_repeat Simple_repeat 1 22 0 2034 107 0 3 chr10 121971902 121972215 -18344550 + AluSg SINE Alu 1 310 0 401 269 35 21 chr10 121973576 121973717 -18343048 - MIR SINE MIR -116 146 4 255 282 176 0 chr10 121973726 121973857 -18342908 - MIR SINE MIR -65 197 44 2279 66 3 0 chr10 121975176 121975465 -18341300 - AluY SINE Alu -21 290 1 1166 181 33 5 chr10 121978541 121978751 -18338014 + MLT1A2 LTR MaLR 159 374 0 1060 185 47 9 chr10 121978950 121979161 -18337604 + MER20 DNA MER1_type 1 219 0 599 278 62 24 chr10 121979568 121979777 -18336988 - MIR SINE MIR 0 262 46 755 123 33 8 chr10 121979801 121979923 -18336842 + L1PB1 LINE L1 6024 6148 -3 21 0 0 0 chr10 121979962 121979983 -18336782 + AT_rich Low_complexity Low_complexity 1 21 0 1462 255 75 83 chr10 121980027 121980749 -18336016 + MER21B LTR ERV1 24 739 -124 390 247 0 0 chr10 121980977 121981054 -18335711 + MIR SINE MIR 110 186 -76 292 242 0 0 chr10 121981172 121981234 -18335531 - MER113 DNA MER1_type? -1 520 459 29 28 0 0 chr10 121981250 121981286 -18335479 + AT_rich Low_complexity Low_complexity 1 36 0 272 227 0 0 chr10 121981388 121981454 -18335311 - MER113 DNA MER1_type? -420 101 36 2114 96 10 26 chr10 121981887 121982199 -18334566 - AluSp SINE Alu -6 307 1 180 290 43 29 chr10 121982498 121982567 -18334198 - MIR SINE MIR -173 89 20 495 0 0 0 chr10 121984183 121984238 -18332527 + (CA)n Simple_repeat Simple_repeat 2 56 0 292 346 16 16 chr10 121985469 121985596 -18331169 + MIR SINE MIR 57 183 -79 272 275 140 31 chr10 121985792 121985985 -18330780 - MIR SINE MIR -38 224 11 1656 111 4 0 chr10 121986237 121986471 -18330294 - AluSg/x SINE Alu -7 303 69 234 351 21 73 chr10 121987177 121987368 -18329397 + MIR3 SINE MIR 16 196 -12 267 287 56 19 chr10 121987863 121987971 -18328794 + MIR SINE MIR 20 131 -131 2407 65 0 3 chr10 121988063 121988372 -18328393 + AluY SINE Alu 3 310 -1 201 246 33 16 chr10 121988873 121988934 -18327831 - MIR3 SINE MIR -36 172 111 221 268 0 18 chr10 121989577 121989633 -18327132 - L2 LINE L2 -8 3264 3210 189 0 0 0 chr10 121989855 121989876 -18326889 + (A)n Simple_repeat Simple_repeat 1 21 0 887 238 90 46 chr10 121990633 121990956 -18325809 - L2 LINE L2 0 3313 2977 357 82 0 0 chr10 121991506 121991555 -18325210 + (CA)n Simple_repeat Simple_repeat 2 50 0 246 62 0 0 chr10 121991816 121991848 -18324917 + (TG)n Simple_repeat Simple_repeat 1 32 0 187 230 65 108 chr10 121992131 121992270 -18324495 + MIR SINE MIR 124 256 -6 216 97 0 0 chr10 121995887 121995918 -18320847 + (T)n Simple_repeat Simple_repeat 1 31 0 264 59 0 0 chr10 121996285 121996319 -18320446 + (CA)n Simple_repeat Simple_repeat 1 34 0 212 239 30 142 chr10 121998426 121998560 -18318205 - MIR SINE MIR -38 224 106 614 270 66 31 chr10 121998564 121998760 -18318005 - MER63A DNA MER1_type 0 210 8 184 402 47 0 chr10 121999095 121999202 -18317563 - L2 LINE L2 -50 3222 3111 300 315 148 20 chr10 121999243 121999446 -18317319 - MIR SINE MIR 0 262 34 340 273 36 18 chr10 121999483 121999593 -18317172 - L2 LINE L2 -227 3045 2934 731 310 20 20 chr10 121999620 121999865 -18316900 - MIR SINE MIR -10 252 8 323 309 19 74 chr10 121999914 122000076 -18316689 - L2 LINE L2 -467 2847 2695 23 0 0 0 chr10 122000950 122000973 -18315792 + AT_rich Low_complexity Low_complexity 1 23 0 263 319 55 0 chr10 122001462 122001553 -18315212 - MIR3 SINE MIR -46 162 67 2247 127 33 28 chr10 122001885 122002246 -18314519 - THE1B LTR MaLR 0 364 2 416 284 14 50 chr10 122002423 122002564 -18314201 + MIR SINE MIR 8 143 -119 1809 191 111 30 chr10 122005240 122005715 -18311050 + MLT1D LTR MaLR 1 501 -4 266 368 35 0 chr10 122005754 122005841 -18310924 + MIR SINE MIR 26 115 -147 1413 145 66 0 chr10 122005849 122006083 -18310682 + MSTA LTR MaLR 1 249 -179 2310 148 74 17 chr10 122006146 122006551 -18310214 + MSTA LTR MaLR 1 428 0 186 283 126 89 chr10 122007823 122008070 -18308695 - L3b LINE CR1 -142 1441 1186 283 270 0 0 chr10 122008244 122008307 -18308458 + L2 LINE L2 3251 3313 0 324 279 120 38 chr10 122008474 122008657 -18308108 - MIR SINE MIR -41 221 24 277 316 143 15 chr10 122009286 122009419 -18307346 + MIR SINE MIR 109 258 -4 342 284 164 8 chr10 122009661 122009795 -18306970 - MIR SINE MIR -14 248 94 221 203 119 0 chr10 122010040 122010099 -18306666 + L2 LINE L2 3169 3234 -38 440 150 62 0 chr10 122011128 122011208 -18305557 + MER5A DNA MER1_type 23 107 -82 494 252 24 0 chr10 122012404 122012531 -18304234 + Charlie1 DNA MER1_type 1 130 -2631 * 1269 176 32 38 chr10 122012528 122012841 -18303924 + Charlie1 DNA MER1_type 2449 2759 -2 218 264 0 0 chr10 122013259 122013312 -18303453 + MIR SINE MIR 201 253 -9 782 165 0 30 chr10 122013972 122014105 -18302660 - FLAM_A SINE Alu 0 133 5 370 283 131 40 chr10 122014222 122014420 -18302345 - MIR SINE MIR -11 251 36 186 71 0 0 chr10 122014891 122014919 -18301846 + (CAGCC)n Simple_repeat Simple_repeat 4 31 0 1044 126 0 0 chr10 122015510 122015653 -18301112 - AluSp/q SINE Alu -17 296 154 226 298 20 80 chr10 122016737 122016888 -18299877 + L2 LINE L2 3016 3157 -115 1140 119 0 0 chr10 122016936 122017113 -18299652 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 191 217 17 0 chr10 122017164 122017224 -18299541 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 201 274 195 55 chr10 122017259 122017587 -18299178 + L2 LINE L2 1903 2276 -1038 1422 188 0 49 chr10 122019778 122020066 -18296699 + AluJo SINE Alu 39 312 0 1993 151 13 0 chr10 122023352 122023656 -18293109 - AluSx SINE Alu -4 308 1 2389 105 0 3 chr10 122023668 122023982 -18292783 - AluSq SINE Alu 0 313 1 1697 179 40 10 chr10 122024887 122025183 -18291582 - AluJo SINE Alu -7 305 1 1616 147 8 12 chr10 122025233 122025492 -18291273 + AluSq SINE Alu 9 266 -47 187 192 27 14 chr10 122025602 122025675 -18291090 + CT-rich Low_complexity Low_complexity 2 75 0 300 346 16 16 chr10 122025973 122026100 -18290665 + MIR SINE MIR 57 183 -79 276 282 133 36 chr10 122026296 122026491 -18290274 - MIR SINE MIR -38 224 11 1775 117 4 0 chr10 122026737 122026976 -18289789 - AluSg/x SINE Alu -2 308 69 248 351 21 73 chr10 122027684 122027875 -18288890 + MIR3 SINE MIR 16 196 -12 273 287 56 19 chr10 122028371 122028479 -18288286 + MIR SINE MIR 20 131 -131 2472 58 0 13 chr10 122028571 122028883 -18287882 + AluY SINE Alu 3 310 -1 200 246 33 16 chr10 122029392 122029453 -18287312 - MIR3 SINE MIR -36 172 111 223 268 0 18 chr10 122030096 122030152 -18286613 - L2 LINE L2 -8 3264 3210 198 0 0 0 chr10 122030374 122030396 -18286369 + (A)n Simple_repeat Simple_repeat 1 22 0 882 239 93 47 chr10 122031153 122031475 -18285290 - L2 LINE L2 0 3313 2977 411 73 0 0 chr10 122032025 122032080 -18284685 + (CA)n Simple_repeat Simple_repeat 2 56 0 225 94 0 0 chr10 122032341 122032373 -18284392 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 243 57 107 chr10 122032656 122032796 -18283969 + MIR SINE MIR 124 256 -6 216 97 0 0 chr10 122036416 122036447 -18280318 + (T)n Simple_repeat Simple_repeat 1 31 0 297 75 0 0 chr10 122036814 122036854 -18279911 + (CA)n Simple_repeat Simple_repeat 1 40 0 210 239 30 142 chr10 122038961 122039095 -18277670 - MIR SINE MIR -38 224 106 234 219 137 14 chr10 122039099 122039172 -18277593 - MER63 DNA MER1_type 0 1061 980 * 578 261 8 0 chr10 122039165 122039295 -18277470 - MER63 DNA MER1_type -298 764 8 180 402 47 0 chr10 122039630 122039737 -18277028 - L2 LINE L2 -50 3222 3111 283 320 148 20 chr10 122039778 122039981 -18276784 - MIR SINE MIR 0 262 34 343 273 36 18 chr10 122040018 122040128 -18276637 - L2 LINE L2 -227 3045 2934 735 310 20 20 chr10 122040155 122040400 -18276365 - MIR SINE MIR -10 252 8 322 309 19 74 chr10 122040449 122040611 -18276154 - L2 LINE L2 -467 2847 2695 23 0 0 0 chr10 122041485 122041508 -18275257 + AT_rich Low_complexity Low_complexity 1 23 0 267 319 55 0 chr10 122041997 122042088 -18274677 - MIR3 SINE MIR -46 162 67 2281 125 33 28 chr10 122042420 122042781 -18273984 - THE1B LTR MaLR 0 364 2 395 305 7 43 chr10 122042958 122043099 -18273666 + MIR SINE MIR 8 143 -119 1674 187 111 27 chr10 122045807 122046250 -18270515 + MLT1D LTR MaLR 22 501 -4 265 338 0 2 chr10 122046306 122046382 -18270383 + MIR SINE MIR 47 121 -87 1389 145 64 0 chr10 122046384 122046618 -18270147 + MSTA LTR MaLR 1 249 -179 2286 151 74 17 chr10 122046681 122047086 -18269679 + MSTA LTR MaLR 1 428 0 196 289 126 85 chr10 122048359 122048605 -18268160 - L3b LINE CR1 -142 1441 1186 283 270 0 0 chr10 122048779 122048842 -18267923 + L2 LINE L2 3251 3313 0 286 266 130 32 chr10 122049009 122049163 -18267602 - MIR SINE MIR -41 221 53 277 316 143 15 chr10 122049819 122049952 -18266813 + MIR SINE MIR 109 258 -4 367 269 164 8 chr10 122050194 122050328 -18266437 - MIR SINE MIR -14 248 94 221 203 119 0 chr10 122050573 122050632 -18266133 + L2 LINE L2 3169 3234 -38 440 150 62 0 chr10 122051660 122051740 -18265025 + MER5A DNA MER1_type 23 107 -82 494 252 24 0 chr10 122052932 122053059 -18263706 + Charlie1 DNA MER1_type 1 130 -2631 * 1269 176 32 38 chr10 122053056 122053369 -18263396 + Charlie1 DNA MER1_type 2449 2759 -2 218 264 0 0 chr10 122053787 122053840 -18262925 + MIR SINE MIR 201 253 -9 782 165 0 30 chr10 122054500 122054633 -18262132 - FLAM_A SINE Alu 0 133 5 370 283 131 40 chr10 122054750 122054948 -18261817 - MIR SINE MIR -11 251 36 186 71 0 0 chr10 122055418 122055446 -18261319 + (CAGCC)n Simple_repeat Simple_repeat 4 31 0 1044 126 0 0 chr10 122056037 122056180 -18260585 - AluSp/q SINE Alu -17 296 154 186 303 19 77 chr10 122057263 122057418 -18259347 + L2 LINE L2 3016 3161 -111 840 139 12 6 chr10 122057461 122057634 -18259131 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 191 217 17 0 chr10 122057649 122057709 -18259056 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 1371 181 0 56 chr10 122060263 122060551 -18256214 + AluJo SINE Alu 39 310 -2 1945 138 14 3 chr10 122063851 122064142 -18252623 - AluSx SINE Alu -18 294 1 2358 105 0 3 chr10 122064154 122064468 -18252297 - AluSq SINE Alu 0 313 1 2289 132 0 31 chr10 122066829 122067216 -18249549 + L1MB1 LINE L1 5794 6168 0 2436 85 0 3 chr10 122068380 122068687 -18248078 + AluY SINE Alu 2 307 -4 4279 200 86 76 chr10 122069098 122069698 -18247067 + L1ME2 LINE L1 3618 4210 -1954 578 143 10 0 chr10 122069698 122069796 -18246969 - L1MA4A LINE L1 -6 6297 6199 4279 200 86 76 chr10 122069796 122069828 -18246937 + L1ME2 LINE L1 4210 4240 -1924 603 154 8 16 chr10 122069828 122069951 -18246814 - L1MA7 LINE L1 0 6291 6170 4279 200 86 76 chr10 122069951 122071836 -18244929 + L1ME2 LINE L1 4240 6154 -10 189 0 0 0 chr10 122071840 122071861 -18244904 + (A)n Simple_repeat Simple_repeat 1 21 0 1838 169 0 10 chr10 122071861 122072175 -18244590 + AluJo SINE Alu 1 311 -1 357 314 134 17 chr10 122073379 122073551 -18243214 + MIR3 SINE MIR 17 208 0 258 206 48 16 chr10 122076618 122076681 -18240084 + MARNA DNA Mariner 118 182 -404 516 251 176 54 chr10 122076728 122077023 -18239742 - MARNA DNA Mariner -239 347 17 2119 119 0 3 chr10 122077749 122078035 -18238730 - AluSg SINE Alu -25 285 1 289 56 463 0 chr10 122079108 122079162 -18237603 - MADE1 DNA Mariner -1 79 1 2088 119 0 0 chr10 122081540 122081818 -18234947 - AluSx SINE Alu -34 278 1 28 0 0 0 chr10 122083252 122083280 -18233485 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 122083590 122083610 -18233155 + (TC)n Simple_repeat Simple_repeat 1 20 0 208 284 22 104 chr10 122083665 122083799 -18232966 - MIR3 SINE MIR -71 137 15 287 267 199 31 chr10 122083926 122084087 -18232678 - MER5A DNA MER1_type -1 188 1 358 291 33 78 chr10 122084520 122084802 -18231963 + L1ME3A LINE L1 4887 5145 -1001 2419 94 0 0 chr10 122084802 122085101 -18231664 + AluSx SINE Alu 11 309 -3 358 291 33 78 chr10 122085101 122085244 -18231521 + L1ME3A LINE L1 5145 5293 -853 1114 258 70 10 chr10 122085250 122085637 -18231128 + Charlie2 DNA MER1_type 2451 2860 -2 641 248 28 21 chr10 122085666 122085919 -18230846 + L1ME3A LINE L1 5682 5939 -231 183 218 0 0 chr10 122085982 122086037 -18230728 + (TA)n Simple_repeat Simple_repeat 1 55 0 429 180 0 11 chr10 122086132 122086221 -18230544 - MER69 DNA AcHobo -3 2523 2436 * 2696 225 59 36 chr10 122086211 122086903 -18229862 - MER69 DNA AcHobo -518 708 1 243 170 0 0 chr10 122087088 122087135 -18229630 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 477 248 0 0 chr10 122087933 122088062 -18228703 + (TG)n Simple_repeat Simple_repeat 1 129 0 213 264 302 0 chr10 122088140 122088269 -18228496 - MIR3 SINE MIR -7 201 34 589 268 118 22 chr10 122088293 122088521 -18228244 + MIR SINE MIR 13 262 0 3794 73 22 10 chr10 122090461 122090966 -18225799 + MER75 DNA T2_type 4 514 0 443 305 134 24 chr10 122091917 122092215 -18224550 - L2 LINE L2 -377 2937 2607 1542 162 24 26 chr10 122092290 122092620 -18224145 - MSTB LTR MaLR 0 426 1 299 255 43 130 chr10 122092865 122092946 -18223819 - MIR SINE MIR -14 248 162 384 59 0 0 chr10 122092946 122092997 -18223768 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 299 255 43 130 chr10 122092997 122093123 -18223642 - MIR SINE MIR -100 162 59 2928 230 63 23 chr10 122093590 122094627 -18222138 + L1ME3A LINE L1 5054 6138 -32 419 253 49 6 chr10 122095057 122095216 -18221549 - MIR SINE MIR -44 164 34 184 158 70 53 chr10 122098277 122098334 -18218431 + L2 LINE L2 3256 3313 0 334 277 22 29 chr10 122099274 122099411 -18217354 + MER103 DNA DNA 22 157 -9 572 288 50 62 chr10 122099925 122100283 -18216482 - L1MC4a LINE L1 -1922 5886 5533 216 162 0 0 chr10 122100429 122100466 -18216299 + L2 LINE L2 3274 3310 -3 2168 139 37 3 chr10 122101426 122101778 -18214987 + THE1B LTR MaLR 1 364 0 430 107 146 58 chr10 122102625 122102728 -18214037 + L1MB8 LINE L1 6053 6164 -14 276 53 0 0 chr10 122105591 122105629 -18211136 + (CA)n Simple_repeat Simple_repeat 1 38 0 4440 103 0 2 chr10 122105727 122106341 -18210424 - L1PA13 LINE L1 -2 6161 5549 2610 52 3 0 chr10 122106714 122107024 -18209741 - AluY SINE Alu 0 311 1 348 331 28 35 chr10 122107561 122107703 -18209062 - MER5A DNA MER1_type -5 184 44 946 167 48 11 chr10 122107835 122108021 -18208744 + L1PB2 LINE L1 5958 6150 -1 549 219 23 47 chr10 122108110 122108238 -18208527 - L2 LINE L2 -6 3307 3183 2714 196 91 62 chr10 122109249 122110052 -18206713 + LTR1B LTR ERV1 1 826 0 208 335 119 55 chr10 122112241 122112626 -18204139 - L2 LINE L2 -15 3257 2848 2208 71 7 14 chr10 122113715 122114009 -18202756 + AluSp SINE Alu 1 292 -21 204 147 29 0 chr10 122116085 122116119 -18200646 - L2 LINE L2 -16 3297 3263 1953 139 123 5 chr10 122116235 122116616 -18200149 + MSTB LTR MaLR 1 426 0 327 104 0 0 chr10 122116624 122116672 -18200093 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 364 350 81 25 chr10 122116840 122117277 -18199488 - L2 LINE L2 -227 3045 2579 192 351 81 9 chr10 122117401 122117512 -18199253 - L2 LINE L2 -1018 2296 2178 344 295 18 27 chr10 122119103 122119215 -18197550 - MIR SINE MIR -12 250 140 625 256 23 0 chr10 122119361 122119494 -18197271 - MIR SINE MIR -125 137 2 2266 92 0 19 chr10 122121546 122121863 -18194902 - AluY SINE Alu 0 311 1 218 288 0 0 chr10 122122014 122122087 -18194678 + G-rich Low_complexity Low_complexity 1 73 0 265 251 88 40 chr10 122123266 122123439 -18193326 - MIR SINE MIR -48 214 34 500 238 40 0 chr10 122125066 122125192 -18191573 + MIR3 SINE MIR 6 136 -72 784 265 69 53 chr10 122125339 122125716 -18191049 + LTR16A1 LTR ERVL 50 432 -25 24 53 0 0 chr10 122125891 122125929 -18190836 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 122126489 122126511 -18190254 + (A)n Simple_repeat Simple_repeat 1 22 0 282 333 72 20 chr10 122127209 122127362 -18189403 + MIR3 SINE MIR 37 197 -11 328 318 98 62 chr10 122127848 122128153 -18188612 - L2 LINE L2 -14 3299 2984 1630 150 0 55 chr10 122128263 122128542 -18188223 + L1MB3 LINE L1 5875 6135 -48 1948 109 24 14 chr10 122128542 122128836 -18187929 + AluSx SINE Alu 1 297 -15 1630 150 0 55 chr10 122128836 122128883 -18187882 + L1MB3 LINE L1 6135 6183 0 799 159 8 0 chr10 122128894 122129026 -18187739 + FLAM_C SINE Alu 1 133 0 2229 95 0 0 chr10 122131667 122131971 -18184794 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr10 122133068 122133096 -18183669 + AT_rich Low_complexity Low_complexity 1 28 0 1969 59 69 46 chr10 122133698 122134002 -18182763 + AluY SINE Alu 1 311 0 210 328 0 0 chr10 122134581 122134645 -18182120 + L2 LINE L2 3209 3272 0 1129 172 49 29 chr10 122134841 122135045 -18181720 - MER58A DNA MER1_type -16 208 1 2090 163 22 0 chr10 122135280 122135600 -18181165 - MER1B DNA MER1_type 0 339 13 320 336 98 0 chr10 122135749 122135871 -18180894 + MIR SINE MIR 40 173 -89 * 334 255 71 117 chr10 122135869 122136065 -18180700 - L2 LINE L2 -1 3312 3126 1953 129 0 3 chr10 122136128 122136415 -18180350 + AluSg SINE Alu 1 286 -24 578 66 20 62 chr10 122136415 122136686 -18180079 + (TA)n Simple_repeat Simple_repeat 1 259 0 380 172 91 169 chr10 122136698 122136937 -18179828 - MLT1C LTR MaLR -71 319 110 1979 195 0 14 chr10 122136947 122137296 -18179469 + MLT1A1 LTR MaLR 1 344 -21 335 260 48 0 chr10 122137302 122137437 -18179328 + (TATATG)n Simple_repeat Simple_repeat 1 141 0 391 152 163 11 chr10 122137447 122137539 -18179226 - MLT1C LTR MaLR -356 111 6 1753 244 53 7 chr10 122138630 122139061 -18177704 + MLT1C LTR MaLR 8 458 -9 326 225 46 179 chr10 122139280 122139520 -18177245 - L1MC4 LINE L1 -1 8041 7834 2211 173 51 29 chr10 122139575 122139778 -18176987 - L1ME2 LINE L1 -19 6145 5943 766 292 58 21 chr10 122139778 122140103 -18176662 - L1MB2 LINE L1 -233 5938 5602 251 276 0 118 chr10 122140175 122140302 -18176463 + MIR SINE MIR 37 148 -114 1462 218 23 25 chr10 122140342 122140696 -18176069 - MLT1A1 LTR MaLR -2 363 11 269 257 14 14 chr10 122140706 122140776 -18175989 + MIR SINE MIR 168 237 -25 575 303 75 49 chr10 122141904 122142171 -18174594 - L2 LINE L2 -5 3267 2994 1602 146 210 28 chr10 122142328 122142690 -18174075 - MSTA LTR MaLR 0 428 1 3378 181 18 26 chr10 122144024 122144677 -18172088 + L1MC3 LINE L1 6454 7101 -684 265 275 25 12 chr10 122144682 122144762 -18172003 + MLT1F1 LTR MaLR 45 125 -442 614 193 17 8 chr10 122144762 122144881 -18171884 + L1MC3 LINE L1 7190 7309 -476 593 181 105 8 chr10 122144881 122145014 -18171751 - MER7A DNA MER2_type -202 144 1 246 337 40 20 chr10 122145014 122145115 -18171650 + MIR SINE MIR 160 262 0 2001 128 3 0 chr10 122145138 122145436 -18171329 + AluSc SINE Alu 1 299 -10 432 0 0 0 chr10 122145755 122145803 -18170962 + (CA)n Simple_repeat Simple_repeat 1 48 0 2434 42 3 16 chr10 122146455 122146768 -18169997 - AluY SINE Alu -2 309 1 362 281 41 16 chr10 122146949 122147070 -18169695 - MIR3 SINE MIR -54 154 31 345 335 55 5 chr10 122147142 122147360 -18169405 + MER102b DNA MER1_type 104 332 -9 217 182 15 45 chr10 122147399 122147465 -18169300 + (TA)n Simple_repeat Simple_repeat 2 65 0 317 272 265 32 chr10 122147765 122148249 -18168516 + L2 LINE L2 2680 3296 -17 21 0 0 0 chr10 122150344 122150365 -18166400 + AT_rich Low_complexity Low_complexity 1 21 0 201 269 0 19 chr10 122151442 122151494 -18165271 + GA-rich Low_complexity Low_complexity 4 54 0 417 261 256 25 chr10 122151585 122151788 -18164977 + MIR SINE MIR 13 262 0 * 495 281 33 0 chr10 122151783 122151904 -18164861 - MIR SINE MIR -57 205 81 2234 90 0 26 chr10 122152029 122152315 -18164450 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr10 122152315 122152346 -18164419 + (CA)n Simple_repeat Simple_repeat 2 32 0 2234 90 0 26 chr10 122152346 122152371 -18164394 + AluSq SINE Alu 280 304 -9 861 224 132 8 chr10 122152408 122152658 -18164107 - L1ME3A LINE L1 -227 5943 5663 684 290 54 7 chr10 122152837 122153113 -18163652 + L1ME LINE L1 5532 5820 -301 214 244 179 0 chr10 122154101 122154179 -18162586 + L2 LINE L2 3151 3242 -30 528 254 0 0 chr10 122154215 122154329 -18162436 - MIR3 SINE MIR -38 170 57 21 0 0 0 chr10 122155924 122155945 -18160820 + AT_rich Low_complexity Low_complexity 1 21 0 326 307 62 51 chr10 122156984 122157160 -18159605 + MIR SINE MIR 20 197 -65 496 300 59 32 chr10 122157177 122157397 -18159368 + MIR SINE MIR 25 250 -12 468 294 114 44 chr10 122157437 122157665 -18159100 + MIR SINE MIR 19 262 0 364 211 44 11 chr10 122159693 122159783 -18156982 + MIR3 SINE MIR 95 187 -21 249 220 0 0 chr10 122159749 122159799 -18156966 + L3b LINE CR1 1533 1582 -1 * 227 374 12 0 chr10 122160497 122160580 -18156185 + MIR SINE MIR 40 123 -85 184 349 94 9 chr10 122160738 122160844 -18155921 + L2 LINE L2 3137 3251 -21 934 249 40 4 chr10 122160848 122161101 -18155664 - MIR SINE MIR 0 262 1 2077 138 0 0 chr10 122161214 122161504 -18155261 - AluSx SINE Alu -22 290 1 2071 131 0 7 chr10 122161959 122162278 -18154487 - AluSx SINE Alu 0 312 1 252 314 186 6 chr10 122162293 122162449 -18154316 + MIR SINE MIR 58 241 -21 870 180 196 75 chr10 122162567 122162873 -18153892 - MER2 DNA MER2_type 0 344 2 740 232 27 22 chr10 122163757 122163942 -18152823 + MLT1A1 LTR MaLR 172 357 -8 3734 155 31 6 chr10 122163946 122164618 -18152147 + L1MB8 LINE L1 5463 6151 -27 1078 175 23 92 chr10 122164844 122165034 -18151731 + MER33 DNA MER1_type 1 203 -2382 2306 105 0 0 chr10 122165034 122165339 -18151426 + AluSc SINE Alu 1 305 -4 1078 175 23 92 chr10 122165339 122165375 -18151390 + MER33 DNA MER1_type 203 240 -2345 2011 131 14 3 chr10 122165375 122165665 -18151100 - AluSx SINE Alu -19 293 1 1078 175 23 92 chr10 122165665 122165785 -18150980 + MER33 DNA MER1_type 240 324 0 3613 82 4 29 chr10 122166332 122166823 -18149942 - MER1A DNA MER1_type 0 529 51 274 348 0 35 chr10 122167152 122167267 -18149498 - MIR SINE MIR -151 111 1 2213 204 40 42 chr10 122168183 122168477 -18148288 + MLT1D LTR MaLR 1 295 -210 2380 94 0 3 chr10 122168477 122168786 -18147979 + AluSg1 SINE Alu 1 308 -1 2213 204 40 42 chr10 122168786 122168997 -18147768 + MLT1D LTR MaLR 295 505 0 426 316 87 5 chr10 122170019 122170215 -18146550 - MIR SINE MIR -43 219 8 231 61 0 0 chr10 122170486 122170519 -18146246 + (CA)n Simple_repeat Simple_repeat 2 34 0 220 322 140 28 chr10 122171038 122171181 -18145584 + MIR3 SINE MIR 41 199 -9 2150 121 0 3 chr10 122172814 122173111 -18143654 + AluSx SINE Alu 1 296 -16 2813 80 8 11 chr10 122174523 122174896 -18141869 + THE1C LTR MaLR 1 372 -3 1257 191 58 69 chr10 122175402 122175780 -18140985 + MLT1A2 LTR MaLR 1 374 0 437 272 185 8 chr10 122176872 122177115 -18139650 - L1MC4a LINE L1 -1790 6018 5733 484 257 15 7 chr10 122177127 122177263 -18139502 - MIR SINE MIR -123 139 3 23 0 0 0 chr10 122179455 122179478 -18137287 + AT_rich Low_complexity Low_complexity 1 23 0 431 265 136 12 chr10 122180643 122180805 -18135960 - MIR SINE MIR -74 188 7 2189 119 3 0 chr10 122182260 122182555 -18134210 - AluSx SINE Alu -16 296 1 499 151 0 0 chr10 122182649 122182735 -18134030 - L1MA9 LINE L1 -44 6268 6183 365 196 312 22 chr10 122183386 122183524 -18133241 + MER5B DNA MER1_type 1 178 0 39 0 0 0 chr10 122184075 122184114 -18132651 + AT_rich Low_complexity Low_complexity 1 39 0 351 73 49 49 chr10 122184115 122184238 -18132527 + (TTTAA)n Simple_repeat Simple_repeat 3 125 0 365 290 79 41 chr10 122184255 122184596 -18132169 + L1MEd LINE L1 848 1201 -4918 335 278 21 14 chr10 122184789 122184933 -18131832 + L1MEd LINE L1 1395 1539 -4590 5540 165 30 24 chr10 122184940 122185934 -18130831 + L1MC2 LINE L1 5233 6235 -109 2045 113 35 3 chr10 122185934 122186218 -18130547 + AluSq SINE Alu 3 295 -18 5540 165 30 24 chr10 122186218 122186320 -18130445 + L1MC2 LINE L1 6235 6335 -9 302 0 0 0 chr10 122186561 122186596 -18130169 + L1MB7 LINE L1 6141 6175 -9 632 308 151 42 chr10 122186839 122187698 -18129067 + L2 LINE L2 2338 3309 -4 192 277 170 36 chr10 122188410 122188522 -18128243 - MIR SINE MIR -50 212 86 194 343 19 38 chr10 122188940 122189045 -18127720 + L2 LINE L2 3121 3223 -49 276 273 126 66 chr10 122189158 122189341 -18127424 + MLT1K LTR MaLR 388 581 -7 420 284 131 57 chr10 122189490 122189856 -18126909 - L2 LINE L2 0 3313 2921 492 309 122 25 chr10 122190649 122191044 -18125721 + L2 LINE L2 2871 3303 -10 288 0 0 0 chr10 122191738 122191770 -18124995 + (T)n Simple_repeat Simple_repeat 1 32 0 308 347 134 0 chr10 122192569 122192725 -18124040 - MIR SINE MIR -65 143 16 2028 161 0 0 chr10 122193105 122193415 -18123350 + AluSx SINE Alu 1 310 -2 471 298 0 0 chr10 122193622 122193753 -18123012 + MIR SINE MIR 20 150 -112 2180 119 10 3 chr10 122193818 122194128 -18122637 + AluSq SINE Alu 1 312 -1 721 196 8 15 chr10 122194170 122194303 -18122462 + AluJo SINE Alu 1 132 -170 190 226 0 0 chr10 122195539 122195592 -18121173 + L2 LINE L2 3185 3237 -35 467 337 22 11 chr10 122195887 122196065 -18120700 - MIR SINE MIR -81 181 2 423 177 13 0 chr10 122197455 122197534 -18119231 + MER116 DNA Mariner 1 80 0 371 325 84 54 chr10 122197617 122198023 -18118742 + L2 LINE L2 2851 3268 -4 212 159 16 32 chr10 122198105 122198168 -18118597 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 37 23 0 0 chr10 122198183 122198227 -18118538 + AT_rich Low_complexity Low_complexity 1 44 0 217 133 78 11 chr10 122198227 122198317 -18118448 + (TA)n Simple_repeat Simple_repeat 2 97 0 417 274 106 39 chr10 122198433 122198612 -18118153 + MIR SINE MIR 24 214 -48 380 301 24 8 chr10 122199526 122199649 -18117116 + MIR SINE MIR 20 144 -118 186 300 0 17 chr10 122201081 122201141 -18115624 + MIR3 SINE MIR 111 169 -39 334 65 0 0 chr10 122201563 122201609 -18115156 - MADE1 DNA Mariner -34 46 1 397 273 7 39 chr10 122201613 122201767 -18114998 - MIR3 SINE MIR -39 169 21 390 268 30 48 chr10 122202313 122202481 -18114284 + L1ME4a LINE L1 5938 6102 -19 247 291 100 27 chr10 122202627 122202847 -18113918 + L3b LINE CR1 1154 1389 -194 535 274 127 14 chr10 122203093 122203305 -18113460 - MIR SINE MIR -7 255 20 349 341 82 32 chr10 122203521 122203996 -18112769 - L2 LINE L2 -663 2651 2153 277 254 118 0 chr10 122204063 122204173 -18112592 + MIR3 SINE MIR 85 207 -1 235 288 45 0 chr10 122206691 122206757 -18110008 - MIR3 SINE MIR -39 169 101 1042 135 17 34 chr10 122206777 122206955 -18109810 + AluJo SINE Alu 135 309 -3 1860 114 10 38 chr10 122206964 122207278 -18109487 + AluSx SINE Alu 1 306 0 291 28 0 0 chr10 122207722 122207758 -18109007 + (CA)n Simple_repeat Simple_repeat 2 37 0 340 276 217 33 chr10 122207794 122207946 -18108819 - MER5A DNA MER1_type -1 188 9 549 307 57 5 chr10 122207973 122208185 -18108580 + MIR SINE MIR 34 256 -6 262 255 174 0 chr10 122208197 122208295 -18108470 + L2 LINE L2 3199 3313 0 26 74 0 0 chr10 122210923 122210977 -18105788 + GC_rich Low_complexity Low_complexity 1 54 0 354 23 0 0 chr10 122213424 122213467 -18103298 + (TC)n Simple_repeat Simple_repeat 1 43 0 261 57 0 0 chr10 122213466 122213501 -18103264 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 2248 160 5 11 chr10 122215164 122215532 -18101233 + MER47A DNA MER2_type 1 366 0 1400 128 20 0 chr10 122215657 122215861 -18100904 - MER3 DNA MER1_type 0 209 2 291 54 0 0 chr10 122215990 122216027 -18100738 + (ATG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr10 122216221 122216244 -18100521 + AT_rich Low_complexity Low_complexity 1 23 0 2288 119 0 6 chr10 122216271 122216582 -18100183 - AluSg SINE Alu -1 309 1 396 319 49 14 chr10 122217344 122217488 -18099277 + L2 LINE L2 3124 3272 0 180 0 0 0 chr10 122219696 122219716 -18097049 + (T)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr10 122219997 122220028 -18096737 + AT_rich Low_complexity Low_complexity 1 31 0 1878 139 0 0 chr10 122220031 122220289 -18096476 + AluSq SINE Alu 1 258 -55 345 246 55 55 chr10 122220316 122220499 -18096266 - MER112 DNA MER1_type -77 183 1 523 262 66 38 chr10 122220514 122220880 -18095885 + MLT1J LTR MaLR 64 475 -36 200 250 16 62 chr10 122220958 122221022 -18095743 - L2 LINE L2 -12 3301 3241 222 204 0 0 chr10 122221959 122222008 -18094757 + (CA)n Simple_repeat Simple_repeat 1 49 0 421 280 54 2 chr10 122222053 122222207 -18094558 - MIR SINE MIR -62 146 27 24 32 0 0 chr10 122222293 122222324 -18094441 + AT_rich Low_complexity Low_complexity 1 31 0 1769 185 52 0 chr10 122223255 122223580 -18093185 + MER68 LTR ERV1 208 549 -13 1025 212 0 0 chr10 122223674 122223844 -18092921 + MER45A DNA AcHobo 5 174 -4 321 238 124 0 chr10 122224174 122224276 -18092489 - MER103 DNA DNA -9 157 43 2091 154 122 2 chr10 122224276 122224510 -18092255 - MLT1C LTR MaLR 0 467 262 459 0 0 0 chr10 122224510 122224561 -18092204 + (TG)n Simple_repeat Simple_repeat 2 52 0 2091 154 122 2 chr10 122224561 122224736 -18092029 - MLT1C LTR MaLR -205 262 9 181 337 50 20 chr10 122225071 122225172 -18091593 - L2 LINE L2 -645 2669 2566 180 237 338 36 chr10 122225549 122225688 -18091077 + L2 LINE L2 2792 2972 -342 473 244 73 0 chr10 122225807 122225930 -18090835 + L2 LINE L2 3182 3313 0 2068 108 0 24 chr10 122226050 122226375 -18090390 - AluSc SINE Alu 0 309 1 1495 124 33 0 chr10 122227335 122227545 -18089220 + AluSq SINE Alu 1 217 -96 623 274 56 78 chr10 122228291 122228561 -18088204 + Charlie8 DNA MER1_type 2 265 -2152 225 301 32 54 chr10 122228689 122228782 -18087983 - MIR SINE MIR 0 262 172 2552 42 0 10 chr10 122228873 122229181 -18087584 + AluY SINE Alu 1 305 -6 393 273 0 0 chr10 122229194 122229271 -18087494 - L2 LINE L2 -42 3230 3154 616 220 16 0 chr10 122229433 122229683 -18087082 + CT-rich Low_complexity Low_complexity 1 254 0 254 179 0 30 chr10 122229712 122229779 -18086986 + CT-rich Low_complexity Low_complexity 3 67 0 828 175 31 41 chr10 122229828 122230022 -18086743 - L1MB3 LINE L1 -7 6176 5985 992 114 160 0 chr10 122230238 122230413 -18086352 - L1MB3 LINE L1 -310 5873 5671 7022 84 0 49 chr10 122230446 122231362 -18085403 - L1PA10 LINE L1 -1 6167 5262 2168 118 3 0 chr10 122231362 122231659 -18085106 - AluY SINE Alu -13 298 1 7022 84 0 49 chr10 122231659 122231747 -18085018 - L1PA10 LINE L1 -906 5262 5171 229 294 0 0 chr10 122231749 122231817 -18084948 - MER5A DNA MER1_type -115 74 7 279 352 11 0 chr10 122231822 122231910 -18084855 - L2 LINE L2 -208 3064 2976 213 385 0 0 chr10 122232073 122232138 -18084627 - L2 LINE L2 -10 3262 3198 455 165 13 0 chr10 122234811 122234890 -18081875 + MER116 DNA Mariner 1 80 0 318 260 130 0 chr10 122235043 122235143 -18081622 - MIR SINE MIR -7 255 143 191 200 0 0 chr10 122235152 122235187 -18081578 - MIR3 SINE MIR -26 182 148 2187 118 0 13 chr10 122235191 122235369 -18081396 - AluSx SINE Alu -1 311 137 2425 77 0 0 chr10 122235369 122235680 -18081085 - AluY SINE Alu 0 311 1 2187 118 0 13 chr10 122235680 122235816 -18080949 - AluSx SINE Alu -175 137 1 263 290 87 0 chr10 122236043 122236112 -18080653 + MIR SINE MIR 4 78 -184 207 353 46 49 chr10 122236257 122236586 -18080179 + L2 LINE L2 2175 2502 -812 807 234 83 19 chr10 122238723 122238928 -18077837 - MLT1K LTR MaLR -2 586 369 233 0 0 59 chr10 122239226 122239260 -18077505 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 237 314 121 8 chr10 122239272 122239396 -18077369 - MLT1K LTR MaLR -308 280 143 279 272 102 119 chr10 122239889 122239971 -18076794 - L2 LINE L2 -6 3307 3225 2410 84 0 0 chr10 122239971 122240267 -18076498 + AluSg SINE Alu 1 296 -14 279 272 102 119 chr10 122240267 122240555 -18076210 - L2 LINE L2 -88 3225 2943 2200 117 0 3 chr10 122241059 122241357 -18075408 + AluSx SINE Alu 1 297 -15 243 0 0 0 chr10 122241360 122241387 -18075378 + (CA)n Simple_repeat Simple_repeat 2 28 0 576 294 62 6 chr10 122241670 122241847 -18074918 + MIR SINE MIR 48 234 -28 5701 117 25 16 chr10 122241878 122241983 -18074782 - Tigger1 DNA MER2_type 0 2418 2315 2061 73 0 0 chr10 122241983 122242231 -18074534 + AluSx SINE Alu 52 299 -13 5701 117 25 16 chr10 122242231 122242999 -18073766 - Tigger1 DNA MER2_type -103 2315 1537 3449 45 2 0 chr10 122243007 122243406 -18073359 - L1PA5 LINE L1 0 6154 5755 4098 34 0 7 chr10 122243408 122244041 -18072724 + L1PA5 LINE L1 5101 5730 -424 9872 137 17 14 chr10 122244041 122245594 -18071171 - Tigger1 DNA MER2_type -859 1559 1 221 209 313 0 chr10 122247038 122247112 -18069653 + MIR SINE MIR 55 148 -66 631 220 47 0 chr10 122247343 122247493 -18069272 + MER103 DNA DNA 8 164 -2 1052 95 0 7 chr10 122248621 122248768 -18067997 - L1MA9 LINE L1 -619 5693 5548 3349 155 44 3 chr10 122248770 122249364 -18067401 + L1MA9 LINE L1 5695 6312 0 232 366 0 37 chr10 122249387 122249469 -18067296 + MIR3 SINE MIR 77 155 -53 303 205 86 99 chr10 122251107 122251247 -18065518 - MER5B DNA MER1_type -29 149 10 2338 199 32 28 chr10 122251247 122251750 -18065015 + MLT1D LTR MaLR 1 505 0 550 207 0 16 chr10 122253265 122253386 -18063379 - MER53 DNA DNA -70 119 1 277 286 13 0 chr10 122253582 122253659 -18063106 - L2 LINE L2 0 3272 3195 2416 188 95 2 chr10 122254416 122254878 -18061887 + MLT1D LTR MaLR 1 505 0 329 301 28 14 chr10 122255445 122255588 -18061177 - MIR3 SINE MIR -62 146 2 219 307 223 0 chr10 122255633 122255799 -18060966 + L2 LINE L2 2738 2940 -374 295 50 0 0 chr10 122255908 122255948 -18060817 + THE1C-int LTR MaLR 1541 1580 0 2651 123 8 11 chr10 122255948 122256322 -18060443 + THE1C LTR MaLR 1 373 -2 182 341 165 0 chr10 122256343 122256428 -18060337 + L2 LINE L2 3197 3295 -18 21 57 0 0 chr10 122257997 122258032 -18058733 + AT_rich Low_complexity Low_complexity 1 35 0 200 304 30 82 chr10 122258041 122258176 -18058589 + L2 LINE L2 3186 3313 0 242 130 0 37 chr10 122258559 122258613 -18058152 + (TATG)n Simple_repeat Simple_repeat 4 55 0 360 309 24 8 chr10 122258870 122258993 -18057772 + MIR3 SINE MIR 53 177 -31 2060 198 21 50 chr10 122259094 122259284 -18057481 + MLT1C LTR MaLR 2 196 -271 2515 70 0 0 chr10 122259284 122259583 -18057182 + AluY SINE Alu 1 299 -12 2060 198 21 50 chr10 122259583 122259872 -18056893 + MLT1C LTR MaLR 196 467 0 567 268 104 32 chr10 122260184 122260404 -18056361 + MIR SINE MIR 2 237 -25 1984 177 8 19 chr10 122260405 122260767 -18055998 + MLT1A1 LTR MaLR 2 359 -6 797 75 9 0 chr10 122260818 122260924 -18055841 - L1PA7 LINE L1 -4 6150 6044 335 382 23 68 chr10 122261088 122261397 -18055368 + L2 LINE L2 2969 3263 -9 257 100 25 0 chr10 122261974 122262014 -18054751 + L2 LINE L2 3269 3309 -4 367 364 171 0 chr10 122263041 122263228 -18053537 + MIR SINE MIR 18 236 -26 24 32 0 0 chr10 122263765 122263796 -18052969 + AT_rich Low_complexity Low_complexity 1 31 0 584 242 50 0 chr10 122265916 122266036 -18050729 + FLAM_A SINE Alu 1 126 -7 21 36 0 0 chr10 122266384 122266412 -18050353 + AT_rich Low_complexity Low_complexity 1 28 0 615 224 68 7 chr10 122266839 122266986 -18049779 - MIR SINE MIR -19 243 88 21 57 0 0 chr10 122268277 122268312 -18048453 + AT_rich Low_complexity Low_complexity 1 35 0 233 139 0 0 chr10 122268764 122268800 -18047965 - L2 LINE L2 -2 3270 3235 372 219 24 0 chr10 122268997 122269079 -18047686 + LTR37B LTR ERV1 12 95 -373 407 318 0 8 chr10 122269128 122269254 -18047511 + L2 LINE L2 2893 3017 -296 297 234 16 0 chr10 122269267 122269331 -18047434 + MER81 DNA DNA 50 114 0 5173 199 69 65 chr10 122269363 122270512 -18046253 + Charlie1a DNA MER1_type 7 1165 -1596 1659 188 0 25 chr10 122270512 122270826 -18045939 - AluJo SINE Alu -4 308 3 5173 199 69 65 chr10 122270826 122271118 -18045647 + Charlie1a DNA MER1_type 1165 1454 -1 844 242 117 12 chr10 122271124 122271372 -18045393 + L2 LINE L2 3040 3313 0 371 327 79 12 chr10 122272173 122272427 -18044338 - HAL1b LINE L1 -679 669 399 303 246 153 8 chr10 122274133 122274251 -18042514 - L1ME4a LINE L1 -12 6109 5975 669 248 63 22 chr10 122274348 122274618 -18042147 - L1ME4a LINE L1 -303 5818 5538 22 80 0 0 chr10 122274682 122274732 -18042033 + AT_rich Low_complexity Low_complexity 1 50 0 319 301 110 23 chr10 122275228 122275666 -18041099 - L1ME4a LINE L1 -1446 4700 4225 2154 114 0 3 chr10 122275672 122275969 -18040796 + AluSx SINE Alu 1 296 -16 231 73 115 31 chr10 122275989 122276085 -18040680 + (TTATA)n Simple_repeat Simple_repeat 5 108 0 407 298 0 16 chr10 122276098 122276219 -18040546 - L2 LINE L2 -414 2900 2782 2074 112 14 3 chr10 122276945 122277240 -18039525 - AluSq SINE Alu -15 298 1 415 327 0 18 chr10 122279030 122279143 -18037622 + MIR SINE MIR 35 145 -63 331 226 49 29 chr10 122279646 122279748 -18037017 - L3b LINE CR1 -188 1395 1292 22 0 0 0 chr10 122281499 122281521 -18035244 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 122281745 122281769 -18034996 + AT_rich Low_complexity Low_complexity 1 24 0 307 282 99 0 chr10 122282196 122282267 -18034498 - L2 LINE L2 -2 3311 3234 2017 146 108 45 chr10 122282430 122282827 -18033938 + MSTA LTR MaLR 7 428 0 258 303 79 79 chr10 122283020 122283198 -18033567 - MLT1-int LTR MaLR -171 1200 1023 34 0 0 0 chr10 122283305 122283339 -18033426 + AT_rich Low_complexity Low_complexity 1 34 0 346 403 11 0 chr10 122283394 122283580 -18033185 - MLT1-int LTR MaLR -485 886 699 236 265 127 18 chr10 122283818 122283984 -18032781 + L1ME2 LINE L1 2337 2520 -4020 4465 128 61 31 chr10 122283989 122284805 -18031960 - Tigger3(Golem) DNA MER2_type -1 3028 2188 2364 219 93 20 chr10 122284807 122285838 -18030927 + L1ME2 LINE L1 5044 6242 -316 2065 73 4 0 chr10 122285838 122286099 -18030666 + AluSg SINE Alu 38 299 -11 2364 219 93 20 chr10 122286099 122286439 -18030326 + L1ME2 LINE L1 6242 6556 -2 267 305 32 11 chr10 122286751 122286846 -18029919 - L2 LINE L2 -199 3073 2977 * 297 273 269 34 chr10 122286841 122287258 -18029507 - L2 LINE L2 -993 2321 1807 186 167 0 0 chr10 122287359 122287395 -18029370 + GA-rich Low_complexity Low_complexity 2 37 0 277 342 98 5 chr10 122287402 122287586 -18029179 + L1M4 LINE L1 4025 4225 -1921 23 0 0 0 chr10 122287694 122287717 -18029048 + AT_rich Low_complexity Low_complexity 1 23 0 232 232 0 0 chr10 122287753 122287809 -18028956 - L1M4 LINE L1 -2367 3779 3724 182 342 141 0 chr10 122288497 122288646 -18028119 + L2 LINE L2 2803 2972 -342 3533 121 21 8 chr10 122288667 122289186 -18027579 + MER1A DNA MER1_type 4 529 0 367 324 67 42 chr10 122289189 122289427 -18027338 + L2 LINE L2 2988 3231 -82 1572 277 128 30 chr10 122289458 122290276 -18026489 - L2 LINE L2 -1 3312 2419 349 340 48 48 chr10 122291230 122291377 -18025388 - L2 LINE L2 -5 3267 3121 1221 306 33 20 chr10 122291429 122291919 -18024846 + L1MEc LINE L1 73 568 -5828 1726 227 26 19 chr10 122291923 122292699 -18024066 + L1MEc LINE L1 596 4349 -1866 2392 74 0 0 chr10 122292699 122292997 -18023768 + AluY SINE Alu 1 298 -13 1883 149 80 5 chr10 122293002 122293390 -18023375 + L1MB7 LINE L1 4958 5374 -772 630 100 150 8 chr10 122293408 122293528 -18023237 + Tigger3(Golem) DNA MER2_type 2245 2381 -648 3596 174 62 13 chr10 122293551 122293823 -18022942 + L1MB7 LINE L1 5376 5633 -551 5666 122 101 62 chr10 122293823 122294229 -18022536 + Tigger3b DNA MER2_type 1 390 -2638 2089 95 3 24 chr10 122294229 122294523 -18022242 + AluSx SINE Alu 1 288 -24 5666 122 101 62 chr10 122294523 122295301 -18021464 + Tigger3b DNA MER2_type 390 1231 0 3596 174 62 13 chr10 122295301 122295790 -18020975 + L1MB7 LINE L1 5633 6174 -10 2190 101 7 0 chr10 122295838 122296144 -18020621 + AluSg SINE Alu 1 308 -2 267 103 0 0 chr10 122296162 122296201 -18020564 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 279 240 83 55 chr10 122296203 122296420 -18020345 + L1MEc LINE L1 1054 1276 -5120 1405 134 15 11 chr10 122296895 122297156 -18019609 - L1 LINE L1 -1499 4647 4386 436 191 0 0 chr10 122400470 122400538 -17916227 - AluS SINE Alu -244 69 2 2309 104 0 0 chr10 122400539 122400837 -17915928 - AluSx SINE Alu -14 298 1 289 302 176 19 chr10 122400972 122401131 -17915634 - MIR SINE MIR -71 191 8 200 303 0 71 chr10 122401320 122401419 -17915346 - MIR SINE MIR -62 146 81 896 93 37 6 chr10 122401734 122401895 -17914870 + CT-rich Low_complexity Low_complexity 3 168 0 1986 137 7 0 chr10 122401895 122402172 -17914593 - AluSx SINE Alu -33 279 1 525 173 33 21 chr10 122402175 122402298 -17914467 - L1MD3 LINE L1 -1 8041 7871 328 203 0 0 chr10 122403453 122403512 -17913253 - L2 LINE L2 -1 3312 3254 891 192 148 25 chr10 122403646 122403849 -17912916 + MIR SINE MIR 20 247 -15 246 218 154 91 chr10 122403961 122404071 -17912694 + MIR SINE MIR 106 222 -40 2071 97 14 17 chr10 122404184 122404473 -17912292 + AluSq SINE Alu 1 288 -25 2388 77 0 43 chr10 122404485 122404810 -17911955 + AluY SINE Alu 1 311 0 2313 95 13 7 chr10 122405305 122405610 -17911155 + AluSg SINE Alu 1 307 -3 533 247 76 13 chr10 122405938 122406096 -17910669 + MIR SINE MIR 80 247 -15 192 250 71 18 chr10 122406613 122406669 -17910096 + L2 LINE L2 3136 3194 -78 566 175 0 8 chr10 122406672 122406792 -17909973 + CT-rich Low_complexity Low_complexity 3 121 0 912 98 8 0 chr10 122406831 122406953 -17909812 - AluJb SINE Alu -189 123 1 233 224 86 17 chr10 122407002 122407060 -17909705 + MER91A DNA MER1_type 124 185 -11 535 264 52 0 chr10 122407199 122407354 -17909411 + MER103 DNA DNA 1 163 -3 22 0 0 0 chr10 122408025 122408047 -17908718 + AT_rich Low_complexity Low_complexity 1 22 0 389 347 137 18 chr10 122408388 122408607 -17908158 + L2 LINE L2 3005 3249 -23 2110 107 36 0 chr10 122409365 122409646 -17907119 - AluSq SINE Alu -22 291 1 234 0 0 0 chr10 122410061 122410087 -17906678 + (T)n Simple_repeat Simple_repeat 1 26 0 2263 82 0 0 chr10 122410717 122410996 -17905769 + AluSg SINE Alu 21 299 -11 2132 117 56 39 chr10 122411388 122411746 -17905019 - THE1B LTR MaLR 0 364 1 246 236 11 0 chr10 122412308 122412368 -17904397 - MIR SINE MIR -112 150 91 288 233 0 0 chr10 122412851 122412924 -17903841 - MER116 DNA Mariner 0 80 8 518 255 67 17 chr10 122413053 122413229 -17903536 - LTR35 LTR ERV1 -1 670 492 1988 152 3 3 chr10 122413229 122413532 -17903233 + AluSx SINE Alu 1 303 -9 518 255 67 17 chr10 122413532 122413560 -17903205 - LTR35 LTR ERV1 -179 492 467 2676 86 3 0 chr10 122413661 122414021 -17902744 + L1PA13 LINE L1 5803 6163 0 295 185 19 0 chr10 122414028 122414082 -17902683 - LTR58 LTR ERV1 -275 404 350 695 233 26 62 chr10 122414341 122414460 -17902305 - MER5A DNA MER1_type -3 186 75 2528 82 0 0 chr10 122414460 122414766 -17901999 - AluSq SINE Alu -7 306 1 695 233 26 62 chr10 122414766 122414839 -17901926 - MER5A DNA MER1_type -114 75 1 1945 148 7 0 chr10 122415200 122415511 -17901254 + AluSq SINE Alu 1 313 0 2206 181 87 103 chr10 122415716 122415810 -17900955 + MER72 LTR ERV1 1 95 -627 2175 74 3 74 chr10 122415810 122416135 -17900630 + AluSp SINE Alu 1 302 -11 2206 181 87 103 chr10 122416135 122416704 -17900061 + MER72 LTR ERV1 95 653 -69 2167 94 14 3 chr10 122416704 122416992 -17899773 - AluSc SINE Alu -18 291 1 2206 181 87 103 chr10 122416992 122417061 -17899704 + MER72 LTR ERV1 653 722 0 2160 71 6 90 chr10 122417179 122417501 -17899264 - AluSq SINE Alu -16 297 3 195 246 0 18 chr10 122417505 122417562 -17899203 - MER5B DNA MER1_type -116 62 7 216 88 0 29 chr10 122417506 122417540 -17899225 + MER5A DNA MER1_type 129 161 -28 312 291 29 74 chr10 122417576 122417751 -17899014 + MER5A DNA MER1_type 23 189 0 338 324 52 48 chr10 122417848 122418098 -17898667 - L2 LINE L2 -1 3312 3062 915 172 58 6 chr10 122418109 122418283 -17898482 + MER5A DNA MER1_type 7 189 0 207 311 158 10 chr10 122418283 122418477 -17898288 - L2 LINE L2 -249 3064 2842 368 259 39 134 chr10 122418553 122418649 -17898116 - L2 LINE L2 -645 2669 2565 797 193 37 66 chr10 122418649 122418892 -17897873 - MER106A DNA MER1_type 0 236 1 368 259 39 134 chr10 122418892 122419010 -17897755 - L2 LINE L2 -749 2565 2437 2344 88 14 3 chr10 122419010 122419304 -17897461 + AluSx SINE Alu 1 297 -15 2097 65 94 7 chr10 122419307 122419584 -17897181 + AluY SINE Alu 1 301 -10 368 259 39 134 chr10 122419584 122419669 -17897096 - L2 LINE L2 -879 2435 2394 222 290 65 78 chr10 122420008 122420225 -17896540 - L2 LINE L2 -115 3157 2944 2449 46 10 10 chr10 122420302 122420605 -17896160 - AluY SINE Alu -6 305 3 2031 102 11 32 chr10 122420605 122420887 -17895878 - AluSp SINE Alu -37 276 1 448 250 0 33 chr10 122421211 122421331 -17895434 - MIR SINE MIR -130 132 17 306 302 47 7 chr10 122421838 122421987 -17894778 - L1ME4a LINE L1 -3 6118 5964 34 55 0 0 chr10 122422051 122422106 -17894659 + AT_rich Low_complexity Low_complexity 1 55 0 252 0 0 0 chr10 122422106 122422134 -17894631 + (CA)n Simple_repeat Simple_repeat 2 29 0 185 0 0 39 chr10 122422145 122422156 -17894609 + (TG)n Simple_repeat Simple_repeat 2 12 -14 2352 104 0 0 chr10 122422156 122422453 -17894312 + AluSx SINE Alu 1 297 -15 185 0 0 39 chr10 122422453 122422467 -17894298 + (TG)n Simple_repeat Simple_repeat 12 26 0 1817 164 60 21 chr10 122422494 122422690 -17894075 - L1MC2 LINE L1 -2 6342 6155 935 223 35 0 chr10 122422690 122422892 -17893873 - MER6B DNA MER2_type 0 210 2 1817 164 60 21 chr10 122422892 122423080 -17893685 - L1MC2 LINE L1 -189 6155 5943 858 193 0 0 chr10 122423164 122423340 -17893425 - L1ME3 LINE L1 -108 6054 5879 609 128 20 0 chr10 122423370 122423472 -17893293 - L1MB2 LINE L1 -1 6170 6067 4947 224 81 46 chr10 122423482 122424377 -17892388 - L1MEc LINE L1 -3065 3150 2287 2088 123 0 45 chr10 122424377 122424550 -17892215 - AluSx SINE Alu -16 296 142 2230 110 14 0 chr10 122424550 122424842 -17891923 - AluSg SINE Alu -14 296 1 2088 123 0 45 chr10 122424842 122424978 -17891787 - AluSx SINE Alu -170 142 1 4947 224 81 46 chr10 122424978 122425783 -17890982 - L1MEc LINE L1 -3928 2287 1511 2318 90 7 0 chr10 122425783 122426073 -17890692 - AluSx SINE Alu -12 300 9 4947 224 81 46 chr10 122426073 122426947 -17889818 - L1MEc LINE L1 -4704 1511 409 1649 122 21 107 chr10 122426947 122427274 -17889491 - AluYb8 SINE Alu -19 299 1 4947 224 81 46 chr10 122427274 122427501 -17889264 - L1MEc LINE L1 -5806 409 191 2470 87 0 3 chr10 122427509 122427819 -17888946 - AluY SINE Alu -2 309 1 1616 202 3 43 chr10 122428604 122428750 -17888015 + AluJb SINE Alu 1 151 -161 2453 82 7 0 chr10 122428750 122429054 -17887711 + AluSp SINE Alu 1 306 -7 1616 202 3 43 chr10 122429054 122429229 -17887536 + AluJb SINE Alu 151 309 -3 2241 96 0 45 chr10 122429870 122430183 -17886582 + AluSx SINE Alu 1 299 -13 2086 87 84 0 chr10 122430258 122430533 -17886232 - AluY SINE Alu -13 298 1 2226 88 27 0 chr10 122431112 122431406 -17885359 + AluY SINE Alu 1 302 -9 243 0 0 0 chr10 122431406 122431433 -17885332 + (TA)n Simple_repeat Simple_repeat 1 27 0 549 257 36 0 chr10 122431902 122432042 -17884723 - MER103 DNA DNA -12 154 10 2315 106 0 3 chr10 122432055 122432358 -17884407 - AluY SINE Alu -8 303 2 2340 97 7 0 chr10 122432361 122432659 -17884106 - AluSq SINE Alu -13 300 1 340 181 0 0 chr10 122433395 122433467 -17883298 + LTR30 LTR ERV1 552 623 -99 246 62 0 0 chr10 122433469 122433501 -17883264 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 1863 157 83 35 chr10 122434010 122434079 -17882686 - MSTC LTR MaLR -3 425 361 2059 110 27 30 chr10 122434079 122434379 -17882386 - AluSx SINE Alu -12 300 2 1863 157 83 35 chr10 122434379 122434719 -17882046 - MSTC LTR MaLR -67 361 1 391 94 31 16 chr10 122435001 122435065 -17881700 + MIR3 SINE MIR 98 162 -46 2304 121 0 0 chr10 122435113 122435418 -17881347 + AluSx SINE Alu 1 305 -7 245 267 217 33 chr10 122435541 122435661 -17881104 - L2 LINE L2 -3 3310 3169 2507 65 3 0 chr10 122535785 122536091 -17780674 + AluY SINE Alu 1 307 -4 238 333 135 0 chr10 122536102 122536213 -17780552 - MIR3 SINE MIR -28 180 55 2346 90 0 10 chr10 122536645 122536946 -17779819 - AluSg SINE Alu -12 298 1 28 29 0 0 chr10 122537635 122537670 -17779095 + AT_rich Low_complexity Low_complexity 1 35 0 683 335 40 0 chr10 122537869 122538117 -17778648 - MIR SINE MIR 0 262 5 906 224 124 8 chr10 122538157 122538398 -17778367 + MER58B DNA MER1_type 38 306 -35 416 227 201 21 chr10 122542651 122542845 -17773920 + L2 LINE L2 3084 3312 -1 6606 78 2 26 chr10 122543056 122544635 -17772130 - L1PA13 LINE L1 -2 6161 4563 2002 138 3 0 chr10 122544665 122544976 -17771789 + AluSx SINE Alu 1 312 0 323 109 0 0 chr10 122545141 122545187 -17771578 - L1PA13 LINE L1 -1586 4560 4515 210 326 45 11 chr10 122545404 122545493 -17771272 - MER91A DNA MER1_type -104 92 1 2408 61 3 0 chr10 122547585 122547878 -17768887 + AluY SINE Alu 1 294 -17 833 328 171 20 chr10 122547912 122549021 -17767744 + L2 LINE L2 1985 3264 -8 25 0 0 0 chr10 122549273 122549298 -17767467 + AT_rich Low_complexity Low_complexity 1 25 0 435 283 50 95 chr10 122549359 122549669 -17767096 + L1MC/D LINE L1 5260 5583 -862 2331 149 46 12 chr10 122549669 122550086 -17766679 - MER95 LTR ERV 0 431 1 435 283 50 95 chr10 122550086 122550240 -17766525 + L1MC/D LINE L1 5583 5702 -743 2607 58 0 0 chr10 122550240 122550549 -17766216 - AluY SINE Alu -2 309 1 435 283 50 95 chr10 122550549 122550623 -17766142 + L1MC/D LINE L1 5702 5778 -667 26 30 0 0 chr10 122550668 122550701 -17766064 + AT_rich Low_complexity Low_complexity 1 33 0 189 0 0 0 chr10 122550967 122550988 -17765777 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 831 208 7 0 chr10 122550991 122551140 -17765625 - FAM SINE Alu -28 157 8 32 0 0 0 chr10 122551779 122551811 -17764954 + AT_rich Low_complexity Low_complexity 1 32 0 1760 217 126 153 chr10 122552624 122552824 -17763941 + MER52A LTR ERV1 660 864 -891 207 0 0 0 chr10 122552824 122552847 -17763918 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2320 66 14 0 chr10 122552849 122553135 -17763630 - AluY SINE Alu -21 290 1 1760 217 126 153 chr10 122553135 122554038 -17762727 + MER52A LTR ERV1 865 1736 -19 874 104 0 83 chr10 122554396 122554540 -17762225 - FLAM_C SINE Alu -1 132 1 507 251 91 123 chr10 122554697 122555226 -17761539 + MLT1H LTR MaLR 38 549 0 33 0 0 0 chr10 122556057 122556090 -17760675 + AT_rich Low_complexity Low_complexity 1 33 0 803 280 71 41 chr10 122556258 122556710 -17760055 + L2 LINE L2 2679 3144 -169 2484 66 0 0 chr10 122557451 122557754 -17759011 - AluY SINE Alu -8 303 1 2475 188 36 11 chr10 122557778 122558291 -17758474 + LTR27 LTR ERV1 2 490 -11 369 294 28 20 chr10 122558567 122558724 -17758041 - MER5B DNA MER1_type 0 189 28 400 222 0 83 chr10 122558928 122559036 -17757729 + MLT1D LTR MaLR 1 99 -406 366 333 0 16 chr10 122559533 122559656 -17757109 - L2 LINE L2 0 3313 3193 1150 269 79 13 chr10 122559700 122560188 -17756577 - MLT1H LTR MaLR 0 549 6 2411 96 0 0 chr10 122560500 122560803 -17755962 + AluY SINE Alu 1 303 -8 360 232 42 11 chr10 122561251 122561346 -17755419 - MER21B LTR ERV1 -373 490 393 1244 242 152 19 chr10 122562065 122562532 -17754233 + L2 LINE L2 1978 2506 -808 2480 49 0 46 chr10 122562535 122562860 -17753905 - AluY SINE Alu 0 311 2 1186 94 0 0 chr10 122562864 122563023 -17753742 - AluSg/x SINE Alu 0 312 154 854 261 8 21 chr10 122563032 122563266 -17753499 - L1ME1 LINE L1 -163 6072 5842 2351 129 17 0 chr10 122563266 122563616 -17753149 - L1PA16 LINE L1 -5 6161 5806 6861 137 52 5 chr10 122563633 122565804 -17750961 - L1PA15 LINE L1 0 6165 3884 1516 230 3 26 chr10 122565827 122566179 -17750586 - Tigger7 DNA MER2_type -2143 344 1 1097 223 117 25 chr10 122566201 122566604 -17750161 - L1ME1 LINE L1 -408 5825 5386 183 80 0 0 chr10 122566604 122566629 -17750136 + (TC)n Simple_repeat Simple_repeat 2 26 0 2180 139 0 0 chr10 122566629 122566938 -17749827 - AluSc SINE Alu 0 309 1 367 224 31 68 chr10 122566962 122567123 -17749642 - L1ME1 LINE L1 -833 5382 5228 501 107 13 0 chr10 122567124 122567199 -17749566 + U6 snRNA snRNA 1 76 -31 511 206 55 6 chr10 122567199 122567364 -17749401 - L1ME1 LINE L1 -974 5241 5069 357 261 205 42 chr10 122567364 122567382 -17749383 - L1ME1 LINE L1 -4817 1579 1565 2598 182 76 65 chr10 122567382 122568079 -17748686 + MER44D DNA MER2_type 1 705 0 357 261 205 42 chr10 122568079 122568753 -17748012 - L1ME1 LINE L1 -4831 1565 774 308 347 72 26 chr10 122568758 122568951 -17747814 - L1ME1 LINE L1 -5696 700 499 692 320 32 13 chr10 122569053 122569428 -17747337 - L1ME1 LINE L1 -5979 417 36 324 247 0 0 chr10 122569963 122570040 -17746725 + MER3 DNA MER1_type 41 117 -92 291 167 67 0 chr10 122570046 122570136 -17746629 + MER3 DNA MER1_type 2471 2566 0 208 381 44 0 chr10 122570178 122570338 -17746427 - L2 LINE L2 -553 2761 2595 281 224 52 0 chr10 122570648 122570706 -17746059 + MIR SINE MIR 62 122 -140 445 301 138 21 chr10 122571943 122572182 -17744583 - MLT1J2 LTR MaLR -2 448 182 1939 65 12 8 chr10 122572186 122572433 -17744332 - AluSc SINE Alu -9 300 53 291 318 109 5 chr10 122572557 122572749 -17744016 - MIR SINE MIR -48 214 3 322 353 88 0 chr10 122573073 122573175 -17743590 + L2 LINE L2 3145 3255 -17 1853 192 83 41 chr10 122573936 122574420 -17742345 - MLT1D LTR MaLR -1 504 1 646 106 8 59 chr10 122575319 122575593 -17741172 + (GGA)n Simple_repeat Simple_repeat 1 259 0 315 130 0 0 chr10 122575595 122575641 -17741124 + (GGAGAA)n Simple_repeat Simple_repeat 5 50 0 751 168 17 11 chr10 122575645 122575824 -17740941 + GA-rich Low_complexity Low_complexity 1 180 0 331 296 76 15 chr10 122575966 122576098 -17740667 + MIR SINE MIR 36 175 -87 1192 243 137 100 chr10 122576583 122576902 -17739863 + HAL1 LINE L1 47 353 -2154 2337 91 0 7 chr10 122576902 122577211 -17739554 + AluSg1 SINE Alu 1 307 -2 1192 243 137 100 chr10 122577211 122578158 -17738607 + HAL1 LINE L1 353 1359 -1148 3824 107 133 50 chr10 122578185 122579715 -17737050 + pTR5 LTR ERV1 65 2429 -9 4160 115 63 73 chr10 122579748 122580541 -17736224 - LTR1 LTR ERV1 0 785 1 315 232 85 0 chr10 122580585 122580667 -17736098 + HAL1 LINE L1 1433 1521 -986 1162 220 62 18 chr10 122580694 122581035 -17735730 + HAL1 LINE L1 1772 2127 -380 960 221 57 4 chr10 122581046 122581290 -17735475 - LTR31 LTR ERV1 -15 604 348 7537 27 7 0 chr10 122581291 122582351 -17734414 + L1PA4 LINE L1 5088 6153 -2 23 33 0 0 chr10 122582486 122582516 -17734249 + AT_rich Low_complexity Low_complexity 1 30 0 1280 195 101 92 chr10 122582529 122583006 -17733759 - MER31A LTR ERV1 -4 481 1 243 327 110 33 chr10 122583006 122583306 -17733459 - L1MEc LINE L1 -6030 366 44 855 290 122 17 chr10 122583349 122583766 -17732999 - MLT1K LTR MaLR -104 484 24 202 302 0 0 chr10 122583799 122583842 -17732923 + L2 LINE L2 3005 3047 -225 1147 312 71 70 chr10 122584023 122584045 -17732720 - L2 LINE L2 0 3272 3252 6900 121 38 29 chr10 122584045 122584319 -17732446 - Tigger3b DNA MER2_type -1799 1229 959 2166 101 0 7 chr10 122584319 122584606 -17732159 - AluSg1 SINE Alu -24 285 1 6900 121 38 29 chr10 122584606 122585549 -17731216 - Tigger3b DNA MER2_type -2069 959 1 1147 312 71 70 chr10 122585549 122586825 -17729940 - L2 LINE L2 -20 3252 1924 1886 170 3 3 chr10 122587219 122587519 -17729246 + AluJb SINE Alu 1 300 -12 366 235 116 32 chr10 122587778 122588029 -17728736 + L1MC/D LINE L1 5264 5535 -2273 987 195 0 0 chr10 122588218 122588377 -17728388 + FRAM SINE Alu 3 161 -5 22 56 0 0 chr10 122588447 122588483 -17728282 + AT_rich Low_complexity Low_complexity 1 36 0 1474 75 0 0 chr10 122588494 122588681 -17728084 + AluY SINE Alu 123 309 -2 200 295 9 36 chr10 122588697 122588751 -17728014 + (TA)n Simple_repeat Simple_repeat 2 56 -54 1970 192 39 55 chr10 122588751 122589262 -17727503 - MLT1D LTR MaLR -2 503 1 200 295 9 36 chr10 122589262 122589319 -17727446 + (TA)n Simple_repeat Simple_repeat 56 110 0 3309 214 47 107 chr10 122589519 122591074 -17725691 + L1M4 LINE L1 2502 3962 -2184 228 265 0 0 chr10 122591332 122591381 -17725384 - MER5B DNA MER1_type -1 177 129 193 28 0 56 chr10 122591396 122591432 -17725333 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 297 188 0 0 chr10 122591469 122591533 -17725232 - L1ME2 LINE L1 -7 6157 6094 3712 131 25 33 chr10 122591536 122592241 -17724524 - L1MB3 LINE L1 -8 6175 5476 201 29 88 0 chr10 122592241 122592275 -17724490 + T-rich Low_complexity Low_complexity 2 38 0 2587 227 48 43 chr10 122592308 122592393 -17724372 - L1ME2 LINE L1 -66 6098 6015 2235 119 0 0 chr10 122592393 122592696 -17724069 + AluSx SINE Alu 1 303 -9 2587 227 48 43 chr10 122592696 122593702 -17723063 - L1ME2 LINE L1 -149 6015 5004 1557 189 70 6 chr10 122593705 122594080 -17722685 - MSTB LTR MaLR -4 453 1 397 232 80 26 chr10 122594080 122594231 -17722534 - L1ME2 LINE L1 -1137 5009 4851 2352 246 36 36 chr10 122594584 122594647 -17722118 - L1ME2 LINE L1 -1288 4858 4796 2245 80 28 0 chr10 122594647 122594934 -17721831 - AluSq SINE Alu -18 295 1 2352 246 36 36 chr10 122594934 122595764 -17721001 - L1ME2 LINE L1 -1349 4797 3965 225 188 21 21 chr10 122595893 122595941 -17720824 + MER5B DNA MER1_type 130 177 -1 497 217 65 36 chr10 122599234 122599372 -17717393 - L2 LINE L2 -4 3268 3127 21 36 0 0 chr10 122599792 122599820 -17716945 + AT_rich Low_complexity Low_complexity 1 28 0 184 327 89 50 chr10 122600659 122600760 -17716005 - MIR SINE MIR -99 163 59 752 177 20 7 chr10 122600808 122600955 -17715810 - Tigger7 DNA MER2_type 0 2587 2439 603 240 0 0 chr10 122600953 122601078 -17715687 - Tigger7 DNA MER2_type -2146 341 217 * 561 290 65 50 chr10 122601073 122601414 -17715351 - MLT1K LTR MaLR -53 535 190 * 2030 120 9 35 chr10 122601730 122602046 -17714719 - AluSx SINE Alu -4 308 1 682 277 109 49 chr10 122602066 122602496 -17714269 + Charlie8 DNA MER1_type 122 577 -1840 244 303 79 18 chr10 122602602 122602745 -17714020 - MLT1J2 LTR MaLR -275 175 19 2365 87 0 0 chr10 122602745 122603044 -17713721 + AluY SINE Alu 2 300 -11 244 303 79 18 chr10 122603044 122603065 -17713700 - MLT1J2 LTR MaLR -431 19 1 327 313 151 57 chr10 122603722 122603987 -17712778 - L2 LINE L2 -1 3271 2982 647 147 159 0 chr10 122605341 122605504 -17711261 - MER53 DNA DNA 0 189 1 627 292 38 22 chr10 122605523 122605708 -17711057 + MIR SINE MIR 50 237 -25 2243 66 0 0 chr10 122606528 122606802 -17709963 + AluY SINE Alu 37 310 -1 201 214 41 20 chr10 122607013 122607111 -17709654 + (TA)n Simple_repeat Simple_repeat 1 100 0 204 40 0 0 chr10 122607116 122607141 -17709624 + (CA)n Simple_repeat Simple_repeat 2 26 0 197 232 29 72 chr10 122607726 122607795 -17708970 + L2 LINE L2 3164 3229 -84 2303 250 66 11 chr10 122608688 122609473 -17707292 + Charlie8 DNA MER1_type 585 1412 -1005 1969 118 104 20 chr10 122609628 122609974 -17706791 + THE1C LTR MaLR 1 375 0 1289 265 92 48 chr10 122609974 122610610 -17706155 + Charlie8 DNA MER1_type 1635 2310 -107 1410 148 21 4 chr10 122610610 122610847 -17705918 - L1PB3 LINE L1 -7 6147 5907 1289 265 92 48 chr10 122610847 122610960 -17705805 + Charlie8 DNA MER1_type 2310 2417 0 21 0 0 0 chr10 122611767 122611788 -17704977 + AT_rich Low_complexity Low_complexity 1 21 0 472 294 52 46 chr10 122612541 122612694 -17704071 - L3 LINE CR1 -1 1576 1423 211 330 140 0 chr10 122612869 122612969 -17703796 - L3 LINE CR1 -166 1411 1298 185 375 23 23 chr10 122613446 122613534 -17703231 - MIR3 SINE MIR -9 199 112 419 145 0 0 chr10 122613545 122613607 -17703158 + FRAM/FAM SINE Alu 1 61 -115 285 221 47 35 chr10 122613872 122613958 -17702807 + FLAM SINE Alu 56 127 -6 1650 145 161 34 chr10 122614298 122614678 -17702087 - MSTA LTR MaLR 0 428 1 25 95 0 0 chr10 122614862 122614936 -17701829 + AT_rich Low_complexity Low_complexity 1 74 0 334 167 42 54 chr10 122615059 122615227 -17701538 + (TTATA)n Simple_repeat Simple_repeat 3 168 0 29 28 0 0 chr10 122615440 122615476 -17701289 + AT_rich Low_complexity Low_complexity 1 36 0 3294 155 8 2 chr10 122615879 122616403 -17700362 + MER1A DNA MER1_type 1 527 0 25 75 0 0 chr10 122616616 122616669 -17700096 + AT_rich Low_complexity Low_complexity 1 53 0 210 345 73 41 chr10 122617075 122617417 -17699348 - L2 LINE L2 -703 2611 2259 292 299 94 8 chr10 122617642 122617759 -17699006 - L2 LINE L2 -5 3267 3141 711 257 93 4 chr10 122618502 122618739 -17698026 - MIR SINE MIR -3 259 2 283 306 259 6 chr10 122619553 122619723 -17697042 + MIR SINE MIR 38 250 -12 400 333 35 0 chr10 122620120 122620264 -17696501 + MIR SINE MIR 44 192 -70 1703 147 104 0 chr10 122620267 122620594 -17696171 + MER46B DNA MER2_type 1 236 0 237 243 0 81 chr10 122620595 122620669 -17696096 + MIR SINE MIR 195 262 0 790 269 25 5 chr10 122620963 122621164 -17695601 - L2 LINE L2 -1096 2218 2014 2346 254 52 12 chr10 122621164 122621841 -17694924 - L2 LINE L2 -1615 1699 996 1878 224 158 9 chr10 122622031 122622615 -17694150 + L2 LINE L2 2191 2861 -453 567 242 39 124 chr10 122622616 122622971 -17693794 - MER46C DNA MER2_type -12 326 2 697 268 97 65 chr10 122622977 122623421 -17693344 + L2 LINE L2 2852 3309 -4 2387 96 6 3 chr10 122624041 122624353 -17692412 + AluSq SINE Alu 1 313 0 268 260 80 19 chr10 122624547 122624717 -17692048 + L1ME LINE L1 5273 5449 -672 478 264 21 71 chr10 122624895 122625134 -17691631 + MLT1I LTR MaLR 166 392 -17 365 226 175 29 chr10 122625388 122625525 -17691240 - L1ME4a LINE L1 -3 6118 5962 272 186 106 26 chr10 122625530 122625643 -17691122 - L1ME4a LINE L1 -273 5848 5727 226 290 21 0 chr10 122626290 122626383 -17690382 + HAL1 LINE L1 2070 2164 -343 346 322 13 40 chr10 122626426 122626575 -17690190 + HAL1b LINE L1 746 890 -458 986 160 16 0 chr10 122626823 122627017 -17689748 - L1M2 LINE L1 -845 5467 5271 1662 190 19 16 chr10 122627023 122627391 -17689374 + L1 LINE L1 4615 4983 -1163 1817 195 17 17 chr10 122627413 122627833 -17688932 + L1MB3 LINE L1 4848 5267 -879 1228 136 50 0 chr10 122628934 122629132 -17687633 - MER3 DNA MER1_type 0 209 2 878 171 35 3 chr10 122630098 122630404 -17686361 + L1MB3 LINE L1 5795 6167 -16 234 176 0 0 chr10 122630669 122630720 -17686045 + CT-rich Low_complexity Low_complexity 1 51 0 695 244 127 18 chr10 122633019 122633248 -17683517 + MIR SINE MIR 8 261 -1 1540 210 3 3 chr10 122633916 122634202 -17682563 + AluJo SINE Alu 1 286 -26 28 0 0 0 chr10 122634335 122634363 -17682402 + AT_rich Low_complexity Low_complexity 1 28 0 197 255 118 0 chr10 122634886 122634937 -17681828 + MIR SINE MIR 133 189 -73 441 54 0 0 chr10 122635130 122635186 -17681579 + (TG)n Simple_repeat Simple_repeat 1 56 0 378 0 0 0 chr10 122635187 122635229 -17681536 + (TA)n Simple_repeat Simple_repeat 2 43 0 2069 120 55 33 chr10 122635301 122635667 -17681098 - THE1C LTR MaLR -1 374 1 25 0 0 0 chr10 122635730 122635755 -17681010 + AT_rich Low_complexity Low_complexity 1 25 0 448 278 85 52 chr10 122636507 122636719 -17680046 - L2 LINE L2 0 3313 3095 2360 91 0 0 chr10 122637449 122637757 -17679008 + AluY SINE Alu 1 308 -3 2642 263 75 41 chr10 122638000 122639038 -17677727 + L1M4c LINE L1 413 1486 -4812 1877 125 6 78 chr10 122639038 122639358 -17677407 + AluSx SINE Alu 1 297 -15 454 167 29 0 chr10 122639366 122639468 -17677297 + GA-rich Low_complexity Low_complexity 1 105 0 4306 230 23 30 chr10 122639522 122639949 -17676816 + L1M4c LINE L1 1936 2365 -4017 1666 183 6 38 chr10 122639949 122640075 -17676690 + AluJo SINE Alu 1 129 -183 369 0 0 0 chr10 122640075 122640116 -17676649 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 2223 129 0 0 chr10 122640118 122640421 -17676344 + AluSx SINE Alu 1 303 -9 1666 183 6 38 chr10 122640421 122640608 -17676157 + AluJo SINE Alu 130 307 -5 4306 230 23 30 chr10 122640608 122641579 -17675186 + L1M4c LINE L1 2365 3319 -3063 1140 117 137 15 chr10 122641579 122641784 -17674981 - MER30 DNA MER1_type 0 230 1 4306 230 23 30 chr10 122641784 122642164 -17674601 + L1M4c LINE L1 3319 3700 -2682 2694 210 35 18 chr10 122642167 122642818 -17673947 + L1 LINE L1 4719 5380 -1002 2459 156 39 2 chr10 122642819 122643229 -17673536 + MSTB LTR MaLR 2 426 0 8962 176 18 9 chr10 122643232 122644867 -17671898 + MSTB-int LTR MaLR 2 1651 0 1716 171 36 0 chr10 122644867 122645176 -17671589 + MSTB LTR MaLR 1 320 -106 2303 83 6 0 chr10 122645176 122645503 -17671262 - L1PA8 LINE L1 -21 6151 5823 * 2201 93 3 20 chr10 122645503 122645803 -17670962 - AluSg SINE Alu -14 296 2 4013 155 83 9 chr10 122645803 122646637 -17670128 - L1MA7 LINE L1 -117 6174 5276 1802 150 34 0 chr10 122647535 122647862 -17668903 + L1MA4 LINE L1 5952 6289 -11 23 0 0 0 chr10 122649553 122649576 -17667189 + AT_rich Low_complexity Low_complexity 1 23 0 533 375 57 19 chr10 122650194 122650664 -17666101 + L2 LINE L2 1710 2197 -1117 21 0 0 0 chr10 122650666 122650687 -17666078 + AT_rich Low_complexity Low_complexity 1 21 0 411 338 89 49 chr10 122650790 122651154 -17665611 + L2 LINE L2 2641 3036 -236 2145 123 0 0 chr10 122651154 122651456 -17665309 - AluSg SINE Alu -8 302 1 411 338 89 49 chr10 122651456 122651703 -17665062 + L2 LINE L2 3036 3272 0 356 243 47 9 chr10 122651786 122651893 -17664872 + MIR SINE MIR 28 138 -70 23 0 0 0 chr10 122652005 122652028 -17664737 + AT_rich Low_complexity Low_complexity 1 23 0 33 0 0 0 chr10 122652407 122652440 -17664325 + AT_rich Low_complexity Low_complexity 1 33 0 2269 51 14 24 chr10 122652440 122652733 -17664032 + AluY SINE Alu 1 290 -21 248 276 9 105 chr10 122652746 122652974 -17663791 - L1MC5 LINE L1 -50 7911 7706 2764 86 95 0 chr10 122652985 122653394 -17663371 + LTR7 LTR ERV1 1 448 -2 21011 92 18 13 chr10 122653396 122656671 -17660094 + HERVH LTR ERV1 1 3290 -4423 3301 93 4 6 chr10 122656661 122657164 -17659601 + HERVH LTR ERV1 3492 3993 -3720 * 4279 127 3 1 chr10 122657166 122657827 -17658938 + HERVH LTR ERV1 4488 5149 -2564 1290 134 18 5 chr10 122657828 122658045 -17658720 + HERVH LTR ERV1 5600 5819 -1894 2223 98 48 13 chr10 122658045 122658422 -17658343 + HERVH LTR ERV1 7324 7713 0 2857 78 95 0 chr10 122658422 122658831 -17657934 + LTR7 LTR ERV1 1 448 -2 569 283 65 22 chr10 122658924 122659246 -17657519 - L1MC5 LINE L1 -317 7644 7309 451 320 47 0 chr10 122660303 122660431 -17656334 - L2 LINE L2 0 3272 3139 2526 51 0 3 chr10 122661178 122661490 -17655275 + AluY SINE Alu 1 311 0 435 376 17 17 chr10 122662123 122662301 -17654464 + MIR3 SINE MIR 16 193 -15 189 147 0 0 chr10 122662332 122662366 -17654399 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 425 108 0 0 chr10 122664028 122664093 -17652672 - L1ME3A LINE L1 -7 6163 6099 2239 82 0 0 chr10 122664093 122664375 -17652390 - AluY SINE Alu -16 295 14 1204 268 45 47 chr10 122664433 122665429 -17651336 - L1ME LINE L1 -523 5647 4650 315 244 12 0 chr10 122665434 122665516 -17651249 - L1ME LINE L1 -1577 4569 4487 7615 124 8 14 chr10 122665508 122665998 -17650767 - L1PA10 LINE L1 0 6168 5677 2296 100 0 0 chr10 122665998 122666298 -17650467 - AluY SINE Alu -11 300 1 7615 124 8 14 chr10 122666298 122667332 -17649433 - L1PA10 LINE L1 -491 5677 4657 1947 145 0 0 chr10 122667332 122667646 -17649119 - AluSx SINE Alu 0 314 1 7615 124 8 14 chr10 122667646 122668094 -17648671 - L1PA10 LINE L1 -1511 4657 4208 655 224 129 0 chr10 122668094 122668264 -17648501 - MIR SINE MIR -46 216 25 410 185 0 0 chr10 122668876 122668941 -17647824 - AluJo SINE Alu -18 294 230 5321 65 67 0 chr10 122668941 122669586 -17647179 - LTR12 LTR ERV1 0 688 1 4886 89 3 0 chr10 122669586 122670227 -17646538 - HERV9 LTR ERV1 0 8399 7757 2079 144 70 153 chr10 122670222 122671199 -17645566 - HERV9 LTR ERV1 -5176 1720 845 * 1008 141 0 0 chr10 122671200 122671349 -17645416 - HERV9 LTR ERV1 -3495 4904 4756 * 10014 97 19 10 chr10 122671348 122672742 -17644023 - HERV9 LTR ERV1 -5427 2972 1567 2846 123 39 20 chr10 122672739 122673177 -17643588 + HERV9 LTR ERV1 1106 1551 -6848 * 6494 118 15 5 chr10 122673180 122674171 -17642594 - HERV9 LTR ERV1 -7274 1125 40 5393 76 23 23 chr10 122674184 122674872 -17641893 - LTR12 LTR ERV1 0 688 1 1236 176 4 53 chr10 122674872 122675117 -17641648 - AluJo SINE Alu -79 233 1 48 60 0 0 chr10 122675117 122675200 -17641565 + AT_rich Low_complexity Low_complexity 1 83 0 25 0 0 0 chr10 122675271 122675296 -17641469 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr10 122675322 122675351 -17641414 + AT_rich Low_complexity Low_complexity 1 29 0 1591 241 91 96 chr10 122675359 122676565 -17640200 + L1MC5 LINE L1 6041 7239 -722 253 341 78 12 chr10 122676715 122676882 -17639883 - MER5B DNA MER1_type 0 178 1 418 317 59 16 chr10 122677084 122677270 -17639495 - MER117 DNA MER1_type 0 197 4 244 319 71 9 chr10 122677434 122677547 -17639218 - L2 LINE L2 -1 3271 3152 2831 6 0 6 chr10 122678124 122678437 -17638328 - AluYa5 SINE Alu 0 311 1 23 0 0 0 chr10 122678483 122678506 -17638259 + AT_rich Low_complexity Low_complexity 1 23 0 2221 95 3 0 chr10 122678506 122678791 -17637974 - AluY SINE Alu -25 286 1 637 215 54 13 chr10 122680024 122680173 -17636592 + MER5B DNA MER1_type 21 175 -3 576 154 17 68 chr10 122680562 122680679 -17636086 + FLAM_A SINE Alu 24 134 -8 336 316 137 26 chr10 122681091 122681281 -17635484 - L2 LINE L2 -373 2941 2731 1956 199 15 22 chr10 122681433 122681506 -17635259 + L1PB4 LINE L1 5757 5829 -327 2155 96 34 0 chr10 122681506 122681626 -17635139 + AluY SINE Alu 1 115 -196 369 0 0 0 chr10 122681626 122681667 -17635098 + (CA)n Simple_repeat Simple_repeat 2 42 0 2155 96 34 0 chr10 122681667 122681837 -17634928 + AluY SINE Alu 115 301 -10 1956 199 15 22 chr10 122681837 122682166 -17634599 + L1PB4 LINE L1 5829 6156 0 248 264 81 23 chr10 122683411 122683585 -17633180 - L1M4 LINE L1 -815 5331 5148 1002 167 22 79 chr10 122683769 122683997 -17632768 - MER20 DNA MER1_type -4 215 1 339 299 53 59 chr10 122684356 122684543 -17632222 + MIR SINE MIR 21 206 -56 264 325 99 21 chr10 122684743 122684934 -17631831 - L1M4 LINE L1 -1908 4238 4033 961 166 39 52 chr10 122685033 122685262 -17631503 + L1MB1 LINE L1 5961 6186 -3 * 965 275 74 24 chr10 122685248 122685564 -17631201 + L1ME3 LINE L1 4787 5086 -1078 3879 123 17 2 chr10 122685564 122686083 -17630682 - MER1A DNA MER1_type 0 527 1 965 275 74 24 chr10 122686083 122686448 -17630317 + L1ME3 LINE L1 5086 5510 -654 453 265 124 68 chr10 122686698 122687243 -17629522 - L2 LINE L2 -3 3310 2720 2285 167 3 3 chr10 122687293 122687653 -17629112 + MLT1A1 LTR MaLR 3 362 -3 1499 196 57 21 chr10 122689212 122689543 -17627222 + MER2 DNA MER2_type 2 344 0 2592 58 0 0 chr10 122689598 122689907 -17626858 + AluY SINE Alu 1 309 -2 2777 149 91 4 chr10 122689907 122690403 -17626362 + Tigger1 DNA MER2_type 1880 2418 0 1589 144 72 41 chr10 122690447 122690738 -17626027 + AluJo SINE Alu 1 300 -12 986 264 31 25 chr10 122691442 122691760 -17625005 + L1ME3 LINE L1 5596 5915 -247 237 196 39 0 chr10 122691894 122691945 -17624820 + MIR SINE MIR 124 176 -86 750 237 53 18 chr10 122692017 122692245 -17624520 + L1ME3 LINE L1 5927 6162 0 359 225 50 42 chr10 122692484 122692504 -17624261 - L1MA10 LINE L1 -2 6332 6313 1274 263 53 15 chr10 122692504 122692903 -17623862 - L1ME1 LINE L1 -15 6151 5738 377 234 40 81 chr10 122693137 122693261 -17623504 + MIR3 SINE MIR 61 179 -29 23 0 0 0 chr10 122693262 122693285 -17623480 + AT_rich Low_complexity Low_complexity 1 23 0 230 193 84 48 chr10 122695745 122695828 -17620937 + MLT2E LTR ERVL 315 400 -228 408 257 29 0 chr10 122695830 122695935 -17620830 - MIR SINE MIR -48 214 107 2138 52 45 0 chr10 122696012 122696322 -17620443 + AluY SINE Alu 1 322 0 2016 122 0 20 chr10 122697186 122697490 -17619275 - AluSx SINE Alu -14 298 1 338 274 209 33 chr10 122697542 122697695 -17619070 - MER5A DNA MER1_type 0 189 10 592 98 12 0 chr10 122798107 122798189 -17518576 - AluY SINE Alu -226 84 2 615 259 131 14 chr10 122798189 122798479 -17518286 - L2 LINE L2 -1091 2223 1900 225 261 0 72 chr10 122798576 122798645 -17518120 - L2 LINE L2 -18 3254 3191 616 259 110 30 chr10 122798732 122798968 -17517797 + MIR SINE MIR 5 259 -3 297 278 78 26 chr10 122799033 122799148 -17517617 - L2 LINE L2 -202 3070 2950 1552 167 7 15 chr10 122799272 122799541 -17517224 + AluJo SINE Alu 1 267 -45 452 248 33 33 chr10 122800813 122800934 -17515831 + L2 LINE L2 3188 3308 -5 279 234 0 0 chr10 122801224 122801301 -17515464 + (TG)n Simple_repeat Simple_repeat 2 78 0 258 230 35 35 chr10 122801301 122801388 -17515377 - MIR3 SINE MIR -109 99 13 573 259 0 0 chr10 122802370 122802482 -17514283 - MER81 DNA DNA -1 113 2 201 94 62 0 chr10 122802559 122802591 -17514174 + (CCCCG)n Simple_repeat Simple_repeat 1 34 0 267 218 35 35 chr10 122803162 122803249 -17513516 + MIR3 SINE MIR 13 99 -109 201 211 0 0 chr10 122803249 122803301 -17513464 + (CA)n Simple_repeat Simple_repeat 2 53 0 217 209 35 93 chr10 122804555 122804580 -17512185 - MIR SINE MIR -56 206 181 2405 82 7 7 chr10 122804580 122804885 -17511880 - AluY SINE Alu -6 305 1 217 209 35 93 chr10 122804885 122804945 -17511820 - MIR SINE MIR -81 181 126 36 40 0 0 chr10 122804951 122805001 -17511764 + AT_rich Low_complexity Low_complexity 1 50 0 2024 133 10 26 chr10 122805045 122805347 -17511418 - AluSx SINE Alu -15 297 1 242 179 18 0 chr10 122805359 122805415 -17511350 + MER113 DNA MER1_type? 130 186 -335 864 245 27 48 chr10 122805633 122805909 -17510856 - L1MEd LINE L1 -3038 3091 2825 2110 145 3 3 chr10 122805909 122806213 -17510552 - AluSx SINE Alu -8 304 1 864 245 27 48 chr10 122806213 122806349 -17510416 - L1MEd LINE L1 -3304 2825 2688 288 208 59 54 chr10 122806353 122806507 -17510258 - L1MEd LINE L1 -3838 2291 2137 2332 81 0 38 chr10 122806507 122806827 -17509938 - AluY SINE Alu -3 308 1 288 208 59 54 chr10 122806827 122806925 -17509840 - L1MEd LINE L1 -3992 2137 2041 1791 212 0 0 chr10 122807144 122807451 -17509314 - AluJb SINE Alu -5 307 1 600 250 66 94 chr10 122807563 122807919 -17508846 - L1MEd LINE L1 -4538 1591 1256 1946 159 0 28 chr10 122807919 122808240 -17508525 - AluJo SINE Alu 0 312 1 600 250 66 94 chr10 122808240 122808437 -17508328 - L1MEd LINE L1 -4873 1256 1055 314 105 0 0 chr10 122808457 122808514 -17508251 - AluSp/q SINE Alu 0 303 247 180 259 62 49 chr10 122808585 122808666 -17508099 + MIR SINE MIR 181 262 0 207 111 28 0 chr10 122808666 122808702 -17508063 + (TTA)n Simple_repeat Simple_repeat 1 37 0 1094 248 78 51 chr10 122809547 122809746 -17507019 - L2 LINE L2 -1 3312 3120 2334 107 0 0 chr10 122809746 122810045 -17506720 + AluSx SINE Alu 1 299 -13 1094 248 78 51 chr10 122810045 122810334 -17506431 - L2 LINE L2 -193 3120 2800 2539 68 0 6 chr10 122810334 122810645 -17506120 + AluY SINE Alu 1 309 -2 1094 248 78 51 chr10 122810645 122810807 -17505958 - L2 LINE L2 -513 2800 2644 322 327 63 24 chr10 122811059 122811264 -17505501 + L1ME4a LINE L1 5627 5839 -282 253 147 15 15 chr10 122811380 122811448 -17505317 + (TA)n Simple_repeat Simple_repeat 2 69 0 2225 114 3 3 chr10 122811568 122811867 -17504898 + AluSx SINE Alu 1 299 -13 260 290 0 0 chr10 122811868 122811937 -17504828 - L1MC/D LINE L1 -1999 5809 5741 320 276 125 34 chr10 122812002 122812266 -17504499 + L1ME4a LINE L1 5812 6099 -22 442 302 170 29 chr10 122813275 122813600 -17503165 - L1MC4a LINE L1 -302 5819 5541 533 203 53 118 chr10 122813600 122813696 -17503069 + MER5B DNA MER1_type 4 105 -73 396 40 0 0 chr10 122813696 122813746 -17503019 + (TG)n Simple_repeat Simple_repeat 2 51 0 533 203 53 118 chr10 122813746 122813790 -17502975 + MER5B DNA MER1_type 105 133 -45 2134 124 0 0 chr10 122813790 122814093 -17502672 + AluSx SINE Alu 1 303 0 533 203 53 118 chr10 122814093 122814137 -17502628 + MER5B DNA MER1_type 133 178 0 442 302 170 29 chr10 122814137 122814206 -17502559 - L1MC4a LINE L1 -580 5541 5383 276 111 0 0 chr10 122816133 122816178 -17500587 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 551 284 77 6 chr10 122816180 122816363 -17500402 - L2 LINE L2 -10 3303 3108 496 226 55 7 chr10 122816441 122816587 -17500178 - MLT1J2 LTR MaLR -288 162 10 320 231 12 100 chr10 122816638 122816724 -17500041 - L1MC4a LINE L1 -1802 6006 5939 2061 112 40 4 chr10 122816724 122817002 -17499763 + AluSx SINE Alu 1 288 -24 320 231 12 100 chr10 122817002 122817075 -17499690 - L1MC4a LINE L1 -1869 5939 5861 222 341 79 0 chr10 122817083 122817209 -17499556 - L2 LINE L2 -565 2749 2614 207 329 117 10 chr10 122817513 122817672 -17499093 + MIR SINE MIR 17 192 -70 1244 311 76 16 chr10 122818075 122818897 -17497868 - L1ME3 LINE L1 -211 5951 5079 225 0 0 0 chr10 122819345 122819370 -17497395 + (CAT)n Simple_repeat Simple_repeat 3 27 0 1511 130 39 115 chr10 122819415 122819745 -17497020 - AluJo SINE Alu -7 305 1 1279 211 103 13 chr10 122819752 122820131 -17496634 + Charlie4a DNA MER1_type 26 438 -70 1107 188 29 14 chr10 122820131 122820168 -17496597 + AluJb SINE Alu 85 120 -192 297 0 0 0 chr10 122820168 122820201 -17496564 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1107 188 29 14 chr10 122820201 122820371 -17496394 + AluJb SINE Alu 120 295 -17 26 0 0 0 chr10 122820371 122820397 -17496368 + AT_rich Low_complexity Low_complexity 1 26 0 301 260 26 0 chr10 122820397 122820474 -17496291 + Charlie4a DNA MER1_type 424 502 -6 365 278 28 0 chr10 122821082 122821190 -17495575 - MLT1I LTR MaLR -101 308 198 1244 218 10 42 chr10 122821775 122821942 -17494823 - AluJb SINE Alu -10 302 148 186 43 0 0 chr10 122821942 122821965 -17494800 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1244 218 10 42 chr10 122821965 122822109 -17494656 - AluJb SINE Alu -164 148 1 474 169 0 0 chr10 122822621 122822698 -17494067 - MER63 DNA MER1_type -30 1032 956 2331 109 0 0 chr10 122822702 122822995 -17493770 + AluSg SINE Alu 1 293 -17 642 246 70 27 chr10 122822995 122823182 -17493583 - MER63 DNA MER1_type -165 897 703 404 317 71 29 chr10 122825344 122825584 -17491181 + MIR SINE MIR 1 250 -12 596 168 26 0 chr10 122826218 122826331 -17490434 - MER5A DNA MER1_type -60 129 14 2765 10 0 0 chr10 122826419 122826713 -17490052 + AluYa5 SINE Alu 1 294 -17 378 325 0 0 chr10 122826737 122826857 -17489908 - MIR SINE MIR -59 149 30 213 211 0 0 chr10 122826866 122826923 -17489842 + (CAT)n Simple_repeat Simple_repeat 3 59 0 1754 167 43 23 chr10 122827728 122827849 -17488916 + AluJb SINE Alu 1 118 -194 189 0 0 0 chr10 122827849 122827870 -17488895 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1754 167 43 23 chr10 122827870 122828087 -17488678 + AluJb SINE Alu 118 312 0 271 194 168 43 chr10 122828102 122828262 -17488503 + MIR SINE MIR 15 179 -29 264 346 38 0 chr10 122830507 122830640 -17486125 + MIR SINE MIR 58 195 -67 1502 140 52 16 chr10 122831929 122832179 -17484586 + AluJo SINE Alu 1 259 -53 3438 139 19 0 chr10 122832219 122832801 -17483964 - L1MB7 LINE L1 -19 6165 5573 546 254 0 0 chr10 122834373 122834487 -17482278 + MER81 DNA DNA 1 114 0 269 288 0 0 chr10 122834495 122834561 -17482204 + MER81 DNA DNA 44 109 -5 307 319 60 11 chr10 122834702 122834884 -17481881 + L1MC4a LINE L1 5752 5942 -1866 2489 265 104 62 chr10 122835142 122836565 -17480200 - L1MC4a LINE L1 -776 7032 5550 2078 143 27 0 chr10 122837858 122838151 -17478614 + AluSx SINE Alu 1 301 -11 250 267 33 0 chr10 122838625 122838685 -17478080 + L2 LINE L2 3198 3259 -13 409 182 341 0 chr10 122839017 122839149 -17477616 - AluJo SINE Alu -6 296 120 2300 114 0 7 chr10 122839222 122839529 -17477236 - AluSx SINE Alu -7 305 1 847 171 7 27 chr10 122839529 122839664 -17477101 - AluSq/x SINE Alu -178 134 1 28 48 0 0 chr10 122839677 122839719 -17477046 + AT_rich Low_complexity Low_complexity 1 42 0 257 304 43 26 chr10 122839985 122840100 -17476665 - MIR SINE MIR -50 212 96 297 237 129 21 chr10 122840245 122840338 -17476427 - MIR SINE MIR -83 125 23 2379 123 28 14 chr10 122840662 122841021 -17475744 - THE1B LTR MaLR 0 364 1 653 265 94 30 chr10 122841101 122841335 -17475430 + MLT1L LTR MaLR 18 266 -349 387 306 226 12 chr10 122841565 122841813 -17474952 + L3 LINE CR1 1276 1576 -1 22 35 0 0 chr10 122842015 122842044 -17474721 + AT_rich Low_complexity Low_complexity 1 29 0 285 313 18 27 chr10 122842215 122842327 -17474438 + MIR SINE MIR 16 126 -82 309 301 49 14 chr10 122842663 122842806 -17473959 - L1ME4a LINE L1 -6 6115 5968 563 235 134 0 chr10 122842912 122843091 -17473674 - MIR SINE MIR 0 262 60 546 232 9 118 chr10 122843607 122843827 -17472938 + MIR SINE MIR 51 246 -16 1738 149 16 72 chr10 122844725 122845046 -17471719 - AluJb SINE Alu -9 303 1 2178 135 7 0 chr10 122845099 122845402 -17471363 - AluSx SINE Alu -7 305 1 2109 140 3 0 chr10 122845479 122845771 -17470994 + AluSx SINE Alu 1 293 -19 190 338 0 0 chr10 122846893 122846961 -17469804 - MIR SINE MIR -20 242 175 396 209 146 9 chr10 122847063 122847173 -17469592 - MIR SINE MIR -91 171 47 488 267 34 14 chr10 122847203 122847349 -17469416 - MIR SINE MIR -101 161 13 294 361 164 5 chr10 122847852 122848071 -17468694 - MIR SINE MIR -1 261 8 303 307 39 39 chr10 122848512 122848665 -17468100 + MIR SINE MIR 40 192 -70 2178 143 94 13 chr10 122848670 122849063 -17467702 - MSTB LTR MaLR -1 425 1 272 220 1 25 chr10 122849151 122849231 -17467534 + L1MC5 LINE L1 7845 8041 -1 22 35 0 0 chr10 122849372 122849401 -17467364 + AT_rich Low_complexity Low_complexity 1 29 0 667 169 0 28 chr10 122849584 122849762 -17467003 + CT-rich Low_complexity Low_complexity 2 174 0 1836 144 11 0 chr10 122849768 122850038 -17466727 - AluJo SINE Alu -39 273 1 406 196 60 75 chr10 122851107 122851240 -17465525 - L2 LINE L2 -1 3271 3141 * 624 309 21 25 chr10 122851206 122851442 -17465323 + MIR SINE MIR 26 260 -2 249 179 54 0 chr10 122851758 122851814 -17464951 - MIR SINE MIR -68 140 82 2242 119 30 25 chr10 122851834 122852196 -17464569 + THE1B LTR MaLR 1 364 0 280 290 65 0 chr10 122852607 122852700 -17464065 + MIR SINE MIR 30 128 -80 2384 114 0 0 chr10 122852707 122853015 -17463750 - AluSq SINE Alu -5 308 1 337 221 0 0 chr10 122853041 122853109 -17463656 - L2 LINE L2 0 3272 3205 194 306 14 28 chr10 122853202 122853274 -17463491 - L3 LINE CR1 -424 1153 1083 225 215 180 30 chr10 122854085 122854249 -17462516 - MIR SINE MIR -51 211 21 362 236 46 9 chr10 122854768 122854899 -17461866 + MIR SINE MIR 44 180 -62 230 290 39 45 chr10 122854914 122855069 -17461696 - L2 LINE L2 -161 3111 2958 475 261 15 30 chr10 122855469 122855603 -17461162 - L2 LINE L2 0 3313 3182 227 288 36 22 chr10 122855693 122855832 -17460933 - L2 LINE L2 -423 2891 2751 181 379 11 11 chr10 122855884 122855971 -17460794 + MIR SINE MIR 54 140 -122 579 306 33 37 chr10 122856719 122856964 -17459801 - MIR SINE MIR -13 249 6 286 221 128 23 chr10 122857144 122857230 -17459535 + MIR SINE MIR 48 142 -120 182 31 0 62 chr10 122858068 122858100 -17458665 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 24 0 0 0 chr10 122858458 122858482 -17458283 + GC_rich Low_complexity Low_complexity 1 24 0 246 105 0 0 chr10 122859744 122859782 -17456983 + (T)n Simple_repeat Simple_repeat 1 38 0 558 29 0 0 chr10 122860019 122860087 -17456678 + (CA)n Simple_repeat Simple_repeat 2 69 0 195 270 32 16 chr10 122860280 122860343 -17456422 + MIR SINE MIR 94 157 -105 352 266 180 0 chr10 122860444 122860572 -17456193 - MIR SINE MIR -81 181 31 283 175 134 21 chr10 122860866 122860963 -17455802 + L1MC5 LINE L1 7810 7917 -44 440 260 81 0 chr10 122861886 122862009 -17454756 + L2 LINE L2 2923 3055 -217 500 270 135 30 chr10 122862067 122862297 -17454468 - MIR SINE MIR -1 261 8 555 237 15 0 chr10 122863076 122863207 -17453558 - MER94 DNA DNA 0 134 2 359 351 19 7 chr10 122863314 122863468 -17453297 + MIR SINE MIR 104 259 -3 1006 261 12 4 chr10 122863496 122863749 -17453016 + MIR SINE MIR 8 262 0 2347 141 40 35 chr10 122863821 122864275 -17452490 - MLT1D LTR MaLR -3 502 47 1044 220 81 106 chr10 122864653 122864721 -17452044 - MLT1H LTR MaLR -8 541 473 1677 184 10 7 chr10 122864721 122865009 -17451756 - AluJo SINE Alu -22 290 2 1044 220 81 106 chr10 122865009 122865422 -17451343 - MLT1H LTR MaLR -76 473 72 2454 73 3 0 chr10 122865712 122866013 -17450752 - AluY SINE Alu -9 302 1 1975 149 0 3 chr10 122866252 122866541 -17450224 - AluSg SINE Alu -6 304 17 333 242 0 0 chr10 122866541 122866615 -17450150 - AluS SINE Alu -243 60 5 447 123 0 14 chr10 122866809 122866882 -17449883 - MER47A DNA MER2_type 0 366 295 427 181 106 88 chr10 122867697 122867857 -17448908 - MIR3 SINE MIR -11 197 35 233 308 65 0 chr10 122867860 122867967 -17448798 - MER117 DNA MER1_type -78 119 6 2077 130 37 0 chr10 122868386 122868685 -17448080 - AluSx SINE Alu -2 310 1 351 283 28 56 chr10 122870131 122870261 -17446504 + MIR SINE MIR 14 143 -82 375 338 102 7 chr10 122870306 122870533 -17446232 + MIR SINE MIR 17 261 -1 1632 129 137 4 chr10 122870541 122870796 -17445969 - AluSg1 SINE Alu -20 289 1 411 188 0 0 chr10 122870894 122870974 -17445791 - L1ME1 LINE L1 -5 6161 6082 1053 144 68 15 chr10 122870974 122871297 -17445468 + Tigger2 DNA MER2_type 1 2718 0 410 211 62 31 chr10 122872015 122872143 -17444622 + MER117 DNA MER1_type 7 138 -59 896 103 41 14 chr10 122872347 122872493 -17444272 - MER47A DNA MER2_type 0 366 217 1324 143 5 5 chr10 122872494 122872683 -17444082 + AluSg SINE Alu 1 189 -121 716 85 0 0 chr10 122872683 122872777 -17443988 + AluSg SINE Alu 57 150 -160 1219 183 19 0 chr10 122872777 122872985 -17443780 + AluSg/x SINE Alu 97 308 -4 1239 133 38 5 chr10 122872987 122873198 -17443567 - MER47A DNA MER2_type -142 224 7 335 255 255 31 chr10 122873355 122873614 -17443151 + MLT1F LTR MaLR 226 542 0 195 217 67 17 chr10 122873939 122873999 -17442766 - MIR SINE MIR -62 146 84 438 20 0 0 chr10 122874682 122874733 -17442032 + (TG)n Simple_repeat Simple_repeat 2 52 0 325 306 22 15 chr10 122875669 122875803 -17440962 + MIR SINE MIR 47 181 -81 418 181 9 29 chr10 122876333 122876438 -17440327 + L1MA4A LINE L1 6200 6302 -1 23 33 0 0 chr10 122876439 122876469 -17440296 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 122877965 122877994 -17438771 + AT_rich Low_complexity Low_complexity 1 29 0 240 35 0 0 chr10 122879149 122879178 -17437587 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 676 178 92 0 chr10 122880607 122880759 -17436006 - L1MB7 LINE L1 -16 6168 6003 330 211 128 18 chr10 122880905 122881014 -17435751 + MIR SINE MIR 72 192 -70 490 274 6 76 chr10 122881033 122881211 -17435554 - MIR SINE MIR -38 224 60 508 280 169 18 chr10 122881443 122881668 -17435097 - MLT1L LTR MaLR -350 265 7 200 306 82 20 chr10 122881865 122881963 -17434802 - L3 LINE CR1 -76 1501 1398 227 233 33 5 chr10 122882074 122882186 -17434579 - MER91A DNA MER1_type -22 174 15 238 233 86 95 chr10 122883558 122883674 -17433091 + MIR SINE MIR 100 214 -48 244 305 0 49 chr10 122884943 122885025 -17431740 - L2 LINE L2 -1 3312 3235 1014 248 100 25 chr10 122885071 122885470 -17431295 - L1MC5 LINE L1 -33 7928 7500 599 193 100 0 chr10 122885476 122885626 -17431139 + MER5A DNA MER1_type 18 182 -7 230 198 60 52 chr10 122885809 122885925 -17430840 - L2 LINE L2 -236 3036 2920 1040 131 6 0 chr10 122886578 122886753 -17430012 + (TCCA)n Simple_repeat Simple_repeat 1 176 0 486 0 0 0 chr10 122887734 122887788 -17428977 + (TA)n Simple_repeat Simple_repeat 2 55 0 2353 65 3 77 chr10 122888779 122889115 -17427650 + AluY SINE Alu 1 311 0 4331 165 17 26 chr10 122890900 122891304 -17425461 - L1MB4 LINE L1 -14 6166 5760 2391 93 3 3 chr10 122891304 122891605 -17425160 - AluSx SINE Alu -11 301 1 4331 165 17 26 chr10 122891605 122892089 -17424676 - L1MB4 LINE L1 -420 5760 5283 369 0 0 0 chr10 122893577 122893618 -17423147 + (TG)n Simple_repeat Simple_repeat 1 41 0 384 234 47 0 chr10 122894265 122894372 -17422393 - MER81 DNA DNA -2 112 1 2484 74 3 3 chr10 122894573 122894884 -17421881 + AluY SINE Alu 1 311 0 245 341 22 0 chr10 122895713 122895804 -17420961 + MIR SINE MIR 48 140 -68 276 218 46 11 chr10 122895815 122895902 -17420863 - MER5B DNA MER1_type -81 97 8 528 276 51 0 chr10 122895931 122896087 -17420678 + MIR SINE MIR 50 213 -49 5418 25 3 0 chr10 122896144 122896796 -17419969 - L1PA4 LINE L1 -3 6152 5499 1192 155 0 10 chr10 122897199 122897392 -17419373 - AluJo SINE Alu 0 312 122 505 115 0 13 chr10 122898640 122898718 -17418047 - AluJ/FRAM SINE Alu -20 292 216 266 299 22 54 chr10 122898836 122899020 -17417745 + L2 LINE L2 2704 2881 -433 882 294 20 4 chr10 122900532 122900780 -17415985 + MIR SINE MIR 11 262 0 808 122 0 83 chr10 122902271 122902427 -17414338 + L1M4 LINE L1 5522 5664 -520 435 202 30 0 chr10 122902456 122902555 -17414210 + L1M4 LINE L1 5646 5747 -431 1869 183 36 82 chr10 122902556 122903081 -17413684 + L1MB7 LINE L1 5670 6170 -14 391 315 72 17 chr10 122903102 122903283 -17413482 + MIR SINE MIR 72 262 0 2388 103 25 8 chr10 122904139 122904497 -17412268 - THE1B LTR MaLR 0 364 1 1045 211 87 79 chr10 122904499 122904735 -17412030 - MSTD LTR MaLR 0 396 154 2355 100 0 29 chr10 122904735 122904912 -17411853 - AluSg SINE Alu -8 302 136 2668 48 0 13 chr10 122904912 122905225 -17411540 - AluY SINE Alu -2 309 1 2355 100 0 29 chr10 122905225 122905358 -17411407 - AluSg SINE Alu -174 136 1 1045 211 87 79 chr10 122905358 122905514 -17411251 - MSTD LTR MaLR -242 154 1 318 167 14 14 chr10 122906891 122906963 -17409802 + L1MB3 LINE L1 6100 6171 -12 266 256 77 0 chr10 122907294 122907372 -17409393 - MIR SINE MIR -60 202 119 515 361 9 9 chr10 122907698 122907911 -17408854 + MIR SINE MIR 39 251 -11 485 222 54 54 chr10 122907865 122908050 -17408715 - MIR SINE MIR -21 241 57 * 231 246 15 15 chr10 122910364 122910429 -17406336 - L2 LINE L2 0 3272 3208 1296 217 165 37 chr10 122910697 122911113 -17405652 + MLT2B1 LTR ERVL 1 483 -37 315 49 0 0 chr10 122911113 122911154 -17405611 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 1296 217 165 37 chr10 122911154 122911198 -17405567 + MLT2B1 LTR ERVL 483 520 0 595 203 51 121 chr10 122914023 122914319 -17402446 + L1MD3 LINE L1 6099 7995 0 350 366 98 50 chr10 122914340 122914922 -17401843 + L1ME4a LINE L1 5512 6121 0 567 295 110 31 chr10 122915089 122915408 -17401357 + MLT1I LTR MaLR 46 389 -20 185 132 26 0 chr10 122916439 122916477 -17400288 + CT-rich Low_complexity Low_complexity 2 40 0 2527 54 0 0 chr10 122917358 122917652 -17399113 + AluY SINE Alu 1 294 -17 1807 144 7 21 chr10 122918539 122918830 -17397935 - AluJb SINE Alu -25 287 1 571 250 67 83 chr10 122919119 122919464 -17397301 + MLT1D LTR MaLR 7 331 -59 531 263 138 14 chr10 122919459 122919838 -17396927 + LTR33 LTR ERVL 48 513 -8 * 189 328 40 32 chr10 122919992 122920117 -17396648 - MIR SINE MIR -77 131 5 545 327 27 14 chr10 122921671 122921894 -17394871 + MIR SINE MIR 19 244 -18 1107 128 27 16 chr10 122922922 122923109 -17393656 + MER5A DNA MER1_type 1 189 0 631 321 100 31 chr10 122923206 122923642 -17393123 - L2 LINE L2 -38 3275 2800 234 0 0 0 chr10 122923904 122923930 -17392835 + (A)n Simple_repeat Simple_repeat 1 26 0 279 291 36 27 chr10 122924074 122924184 -17392581 + MIR SINE MIR 111 221 -41 208 259 12 35 chr10 122924265 122924350 -17392415 - L3 LINE CR1 -496 1081 999 2045 120 0 0 chr10 122924495 122924817 -17391948 + AluSx SINE Alu 1 322 0 2431 56 0 7 chr10 122925572 122925878 -17390887 - AluY SINE Alu -7 304 1 548 243 119 60 chr10 122925890 122925928 -17390837 + L1MCc LINE L1 1293 1327 -5419 1713 137 16 46 chr10 122925928 122926234 -17390531 + AluJo SINE Alu 1 297 -15 548 243 119 60 chr10 122926234 122926601 -17390164 + L1MCc LINE L1 1327 1859 -4887 329 289 58 63 chr10 122927349 122927539 -17389226 - L3 LINE CR1 -700 877 689 207 69 0 0 chr10 122927572 122927601 -17389164 + (A)n Simple_repeat Simple_repeat 1 29 0 1749 157 3 28 chr10 122927610 122927928 -17388837 + AluSx SINE Alu 1 310 -2 366 348 44 10 chr10 122928280 122928484 -17388281 - MIR SINE MIR -6 256 46 252 333 89 14 chr10 122930206 122930419 -17386346 + L2 LINE L2 2429 2657 -657 2028 158 56 0 chr10 122931682 122932023 -17384742 + MLT1A1 LTR MaLR 6 365 0 1765 133 51 3 chr10 122932155 122932448 -17384317 - AluJb SINE Alu -5 307 1 24 0 0 0 chr10 122932528 122932552 -17384213 + AT_rich Low_complexity Low_complexity 1 24 0 1440 267 179 22 chr10 122932815 122934011 -17382754 + L2 LINE L2 1928 3306 -7 229 320 98 0 chr10 122934132 122934254 -17382511 + L2 LINE L2 3136 3269 -3 1012 317 136 23 chr10 122934720 122935338 -17381427 + L3 LINE CR1 280 967 -610 4307 173 57 17 chr10 122935487 122936910 -17379855 + L1MB8 LINE L1 4345 5831 -353 268 128 0 0 chr10 122936910 122936949 -17379816 + AluJb SINE Alu 1 39 -263 1985 107 4 4 chr10 122936954 122937257 -17379508 - AluSc SINE Alu 0 303 1 1735 151 3 17 chr10 122937257 122937547 -17379218 + AluJb SINE Alu 26 312 0 2070 118 0 3 chr10 122937553 122937857 -17378908 + AluSx SINE Alu 1 303 -9 1866 146 20 34 chr10 122937857 122938214 -17378551 + L1MB8 LINE L1 5827 6178 0 292 330 204 6 chr10 122938214 122938390 -17378375 + L3 LINE CR1 1103 1313 -264 291 306 141 38 chr10 122938396 122938716 -17378049 + L2 LINE L2 2946 3298 -15 218 32 32 0 chr10 122938718 122938749 -17378016 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 855 234 66 26 chr10 122939133 122939359 -17377406 - MIR SINE MIR 0 262 28 777 194 142 0 chr10 122940910 122941065 -17375700 - MER45A DNA AcHobo -1 177 1 2424 122 23 0 chr10 122941375 122941727 -17375038 + THE1B LTR MaLR 2 361 -3 275 273 11 11 chr10 122942710 122942798 -17373967 + (TA)n Simple_repeat Simple_repeat 2 89 0 324 257 9 46 chr10 122942799 122942814 -17373951 - L1MC4 LINE L1 -1337 6705 6691 1700 145 17 10 chr10 122942814 122943104 -17373661 + AluJb SINE Alu 1 292 -20 324 257 9 46 chr10 122943104 122943197 -17373568 - L1MC4 LINE L1 -1351 6691 6601 934 164 0 68 chr10 122943234 122943411 -17373354 + Tigger3(Golem) DNA MER2_type 2864 3028 -1 227 272 87 0 chr10 122943416 122943508 -17373257 + MIR SINE MIR 149 248 -14 314 341 62 51 chr10 122943567 122943843 -17372922 - L2 LINE L2 -180 3092 2814 2223 106 0 0 chr10 122944485 122944787 -17371978 - AluSc SINE Alu -7 302 1 181 262 36 83 chr10 122944942 122945026 -17371739 - L2 LINE L2 -36 3236 3157 213 231 0 0 chr10 122945119 122945158 -17371607 - L2 LINE L2 -22 3250 3212 292 137 14 68 chr10 122945922 122945995 -17370770 - L2 LINE L2 -4 3309 3241 377 232 40 32 chr10 122947476 122947597 -17369168 + MIR SINE MIR 34 150 -67 235 263 0 84 chr10 122947973 122948068 -17368697 + L2 LINE L2 3186 3272 0 315 0 0 0 chr10 122949090 122949125 -17367640 + (CA)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr10 122951926 122951952 -17364813 + (A)n Simple_repeat Simple_repeat 1 26 0 25 31 0 0 chr10 122953761 122953793 -17362972 + AT_rich Low_complexity Low_complexity 1 32 0 1763 123 78 0 chr10 122954930 122955214 -17361551 - AluSg SINE Alu -4 306 1 431 297 104 30 chr10 122955750 122955952 -17360813 - MIR SINE MIR -23 239 23 487 273 38 8 chr10 122956035 122956167 -17360598 - MER5B DNA MER1_type 0 178 43 212 271 21 0 chr10 122956246 122956294 -17360471 + MER5B DNA MER1_type 130 178 0 374 271 23 47 chr10 122956432 122956561 -17360204 + MIR SINE MIR 2 127 -135 214 275 0 14 chr10 122956802 122956871 -17359894 - MIR SINE MIR -73 189 122 214 195 0 0 chr10 122956898 122956939 -17359826 - MIR SINE MIR -98 164 124 542 224 78 0 chr10 122958341 122958457 -17358308 + L2 LINE L2 3189 3313 0 2323 90 0 3 chr10 122958659 122958969 -17357796 - AluSc SINE Alu 0 309 1 414 258 32 38 chr10 122958981 122959167 -17357598 - L1ME4a LINE L1 -3 6118 5934 475 264 27 0 chr10 122959982 122960092 -17356673 - L2 LINE L2 0 3272 3160 249 324 29 10 chr10 122961231 122961333 -17355432 + L2 LINE L2 3169 3272 0 297 241 83 19 chr10 122963079 122963187 -17353578 - MIR SINE MIR -67 195 81 295 275 0 38 chr10 122963208 122963288 -17353477 + L2 LINE L2 3196 3272 0 274 329 187 13 chr10 122963329 122963484 -17353281 - MIR3 SINE MIR -26 182 1 766 96 0 0 chr10 122963731 122963835 -17352930 + AluSg/x SINE Alu 199 302 -10 2394 128 16 13 chr10 122964270 122964644 -17352121 + THE1C LTR MaLR 1 375 0 233 267 13 27 chr10 122964720 122964795 -17351970 + MIR3 SINE MIR 13 86 -122 289 135 0 60 chr10 122964958 122965024 -17351741 + MLT1H1 LTR MaLR 161 297 -298 512 239 126 54 chr10 122965095 122965334 -17351431 + MLT1H1 LTR MaLR 292 547 -8 2519 46 0 0 chr10 122965335 122965637 -17351128 + AluY SINE Alu 1 302 -9 265 340 118 0 chr10 122965660 122965804 -17350961 + MIR SINE MIR 76 236 -26 187 274 78 20 chr10 122965930 122965981 -17350784 + L2 LINE L2 3214 3267 -5 2244 90 0 7 chr10 122966601 122966901 -17349864 + AluSg SINE Alu 2 299 -11 2093 132 7 0 chr10 122966983 122967293 -17349472 + AluJb SINE Alu 1 312 0 1978 86 8 0 chr10 122967354 122967611 -17349154 + AluSc SINE Alu 21 279 -30 2277 48 41 0 chr10 122969041 122969331 -17347434 + AluY SINE Alu 1 302 -9 2096 105 7 0 chr10 122969964 122970259 -17346506 - AluSx SINE Alu -15 297 1 799 277 110 23 chr10 122970504 122970858 -17345907 - HAL1 LINE L1 -737 1770 1386 210 167 0 21 chr10 122971392 122971440 -17345325 + (CCA)n Simple_repeat Simple_repeat 1 47 0 269 372 62 0 chr10 122972019 122972132 -17344633 + L2 LINE L2 3136 3255 -17 304 313 0 9 chr10 122972138 122972250 -17344515 - MIR3 SINE MIR -4 204 94 383 241 115 30 chr10 122972756 122972930 -17343835 + MIR SINE MIR 31 219 -43 189 0 0 0 chr10 122973557 122973578 -17343187 + (TA)n Simple_repeat Simple_repeat 2 22 0 207 265 0 0 chr10 122973901 122973950 -17342815 + L2 LINE L2 3224 3272 0 2138 124 13 3 chr10 122974502 122974809 -17341956 + AluSx SINE Alu 1 310 -2 384 22 0 0 chr10 122975677 122975722 -17341043 + (CA)n Simple_repeat Simple_repeat 1 45 0 1114 125 27 0 chr10 122975735 122975919 -17340846 - L1MD3 LINE L1 -77 7918 7730 546 228 37 15 chr10 122976251 122976387 -17340378 + MIR SINE MIR 60 198 -64 2420 81 0 7 chr10 122976517 122976815 -17339950 + AluSq SINE Alu 1 296 -17 2195 117 0 0 chr10 122977064 122977346 -17339419 + AluSx SINE Alu 1 282 -30 2175 100 10 7 chr10 122977510 122977811 -17338954 - AluSg SINE Alu -8 302 1 802 270 38 0 chr10 122977939 122978150 -17338615 + MER20 DNA MER1_type 1 219 0 613 230 189 22 chr10 122978209 122978431 -17338334 - MIR SINE MIR -2 260 2 267 216 69 43 chr10 122978447 122978563 -17338202 - L1 LINE L1 -1094 5052 4934 294 268 102 16 chr10 122978723 122978850 -17337915 + MIR SINE MIR 3 140 -122 1715 139 71 11 chr10 122978868 122979149 -17337616 + AluJo SINE Alu 1 298 -14 1204 145 0 84 chr10 122979700 122979927 -17336838 + AluJo SINE Alu 85 292 -20 221 271 115 49 chr10 122980033 122980155 -17336610 - L2 LINE L2 -33 3239 3110 427 200 85 31 chr10 122980442 122980572 -17336193 + MARNA DNA Mariner 277 413 -173 227 271 0 0 chr10 122980828 122980876 -17335889 + (TG)n Simple_repeat Simple_repeat 1 48 0 471 256 45 9 chr10 122982150 122982338 -17334427 + MIR SINE MIR 10 256 -6 1466 156 74 7 chr10 122982718 122982987 -17333778 + AluJb SINE Alu 12 298 -14 21 0 0 0 chr10 122984040 122984061 -17332704 + AT_rich Low_complexity Low_complexity 1 21 0 2319 79 3 3 chr10 122984250 122984540 -17332225 + AluSq SINE Alu 5 294 -19 2762 88 40 6 chr10 122984656 122985008 -17331757 + THE1B LTR MaLR 1 364 0 2110 131 0 3 chr10 122987007 122987305 -17329460 - AluSx SINE Alu -15 297 1 1420 138 5 0 chr10 122987690 122987893 -17328872 - AluJb SINE Alu -25 287 84 354 45 0 0 chr10 122987893 122987937 -17328828 + (CA)n Simple_repeat Simple_repeat 1 44 0 2354 43 7 3 chr10 122989012 122989294 -17327471 + AluY SINE Alu 1 283 -28 252 0 0 0 chr10 122989294 122989322 -17327443 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 396 253 44 0 chr10 122990139 122990230 -17326535 - MIR SINE MIR -76 186 92 244 282 128 0 chr10 122990273 122990390 -17326375 + L2 LINE L2 2933 3064 -249 2622 46 0 3 chr10 122991081 122991384 -17325381 - AluY SINE Alu -9 302 1 279 0 0 0 chr10 122995311 122995342 -17321423 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr10 122995368 122995389 -17321376 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr10 122995610 122995663 -17321102 + AT_rich Low_complexity Low_complexity 1 53 0 236 232 87 0 chr10 122999772 122999841 -17316924 - MER63 DNA MER1_type -359 703 3 397 209 22 22 chr10 123000031 123000122 -17316643 + L2 LINE L2 3136 3226 -46 1457 288 91 16 chr10 123000691 123001265 -17315500 - MLT2F LTR ERVL -22 641 25 551 279 17 39 chr10 123001845 123002024 -17314741 - MIR3 SINE MIR -14 194 20 358 340 80 12 chr10 123002660 123002822 -17313943 - MIR3 SINE MIR -6 202 30 21 0 0 0 chr10 123004165 123004186 -17312579 + AT_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 123005915 123005962 -17310803 + (CA)n Simple_repeat Simple_repeat 1 47 0 435 146 104 0 chr10 123008167 123008263 -17308502 + MIR SINE MIR 83 188 -74 2156 115 0 35 chr10 123009166 123009480 -17307285 - AluSx SINE Alu -9 303 1 233 209 77 77 chr10 123009556 123009647 -17307118 - MARNA DNA Mariner -472 114 24 213 284 8 142 chr10 123009765 123009892 -17306873 - MIR3 SINE MIR -8 200 91 483 283 81 12 chr10 123010001 123010174 -17306591 - MIR SINE MIR -50 212 28 2219 109 7 0 chr10 123010410 123010704 -17306061 + AluSx SINE Alu 1 296 -16 210 37 0 0 chr10 123011107 123011134 -17305631 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1218 279 34 38 chr10 123011424 123011869 -17304896 - L2 LINE L2 0 3313 2871 408 20 0 0 chr10 123011871 123011920 -17304845 + (TG)n Simple_repeat Simple_repeat 1 49 0 2063 114 35 0 chr10 123015615 123015904 -17300861 + AluSq SINE Alu 1 299 -14 2834 10 0 3 chr10 123017285 123017595 -17299170 + AluYb8 SINE Alu 1 309 -9 972 265 57 0 chr10 123018473 123018703 -17298062 - MIR SINE MIR -19 243 1 21 57 0 0 chr10 123018875 123018910 -17297855 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 123019239 123019261 -17297504 + AT_rich Low_complexity Low_complexity 1 22 0 461 356 0 34 chr10 123021409 123021614 -17295151 - MIR3 SINE MIR -6 202 5 23 33 0 0 chr10 123022752 123022782 -17293983 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr10 123026647 123026682 -17290083 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 252 0 0 0 chr10 123030721 123030749 -17286016 + (TG)n Simple_repeat Simple_repeat 2 29 0 469 220 40 0 chr10 123032854 123032954 -17283811 + MIR SINE MIR 31 134 -128 723 241 60 30 chr10 123033338 123033570 -17283195 - MIR SINE MIR -16 246 8 276 256 111 34 chr10 123035148 123035265 -17281500 - MIR SINE MIR -76 186 61 234 314 50 0 chr10 123035734 123035855 -17280910 - L1MC5 LINE L1 -181 7780 7654 337 242 168 89 chr10 123035963 123036153 -17280612 + MIR SINE MIR 31 235 -27 192 267 105 0 chr10 123036450 123036536 -17280229 + L2 LINE L2 3175 3269 -3 308 310 25 57 chr10 123036680 123036838 -17279927 + L2 LINE L2 3117 3269 -44 380 271 110 90 chr10 123037849 123038104 -17278661 - L2 LINE L2 -13 3259 3000 1630 123 21 0 chr10 123039000 123039236 -17277529 - AluSx SINE Alu -8 304 64 1980 110 48 24 chr10 123039829 123040120 -17276645 - AluSx SINE Alu -14 298 1 365 265 147 29 chr10 123041885 123042055 -17274710 + MIR3 SINE MIR 4 193 -15 2661 184 24 38 chr10 123042670 123042802 -17273963 - L1MB5 LINE L1 0 6174 6042 2304 90 0 7 chr10 123042802 123043091 -17273674 - AluSp SINE Alu -26 287 1 2661 184 24 38 chr10 123043091 123043534 -17273231 - L1MB5 LINE L1 -132 6042 5607 1604 123 43 20 chr10 123043536 123043789 -17272976 - AluSx SINE Alu -53 259 1 1585 185 30 4 chr10 123043873 123044238 -17272527 - MSTB LTR MaLR -4 422 1 243 224 0 0 chr10 123044448 123044497 -17272268 - MLT1I LTR MaLR -281 128 80 568 134 21 10 chr10 123044512 123044609 -17272156 + MER4A LTR ERV1 1 98 -566 1559 126 22 73 chr10 123044609 123044973 -17271792 + MER4A LTR ERV1 261 664 0 2290 87 31 0 chr10 123045740 123045861 -17270904 + AluSx SINE Alu 2 118 -194 228 35 0 0 chr10 123045861 123045890 -17270875 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2290 87 31 0 chr10 123045890 123046054 -17270711 + AluSx SINE Alu 118 296 -16 745 260 140 10 chr10 123046195 123046487 -17270278 - L1MEc LINE L1 -6027 369 40 4250 121 30 53 chr10 123046561 123047248 -17269517 - L1MC1 LINE L1 0 6333 5664 1985 153 0 0 chr10 123047248 123047530 -17269235 + AluSx SINE Alu 2 283 -29 4250 121 30 53 chr10 123047530 123047612 -17269153 - L1MC1 LINE L1 -669 5664 5582 1928 145 0 14 chr10 123047612 123047895 -17268870 + AluSx SINE Alu 1 279 -33 300 53 0 0 chr10 123047895 123047933 -17268832 + (CA)n Simple_repeat Simple_repeat 1 38 0 320 174 0 14 chr10 123047933 123047989 -17268776 - L1MB5 LINE L1 -697 5636 5580 2393 115 0 0 chr10 123047989 123048301 -17268464 + AluSx SINE Alu 1 312 0 320 174 0 14 chr10 123048301 123048313 -17268452 - L1MB5 LINE L1 -753 5580 5569 216 0 0 0 chr10 123048469 123048493 -17268272 + (TA)n Simple_repeat Simple_repeat 2 25 0 2590 221 7 27 chr10 123048528 123049088 -17267677 - MLT2B3 LTR ERVL -5 549 1 237 254 74 41 chr10 123049088 123049210 -17267555 - MLT1J LTR MaLR -52 459 334 895 185 37 6 chr10 123049224 123049386 -17267379 + MER5A DNA MER1_type 1 167 -22 257 245 20 75 chr10 123049505 123049652 -17267113 - MLT1J1 LTR MaLR -295 151 13 229 206 0 95 chr10 123050146 123050209 -17266556 + MIR SINE MIR 105 161 -101 373 261 54 0 chr10 123050779 123050871 -17265894 + MIR SINE MIR 162 258 -4 476 248 23 16 chr10 123051131 123051275 -17265490 - MIR SINE MIR -66 142 30 2387 90 3 0 chr10 123051648 123051947 -17264818 - AluY SINE Alu -11 300 1 3547 119 46 0 chr10 123052000 123052504 -17264261 + MER1A DNA MER1_type 1 527 0 664 167 52 57 chr10 123052747 123052906 -17263859 + MIR SINE MIR 49 214 -48 284 266 21 32 chr10 123052978 123053072 -17263693 + MER5B DNA MER1_type 1 93 -85 438 285 6 47 chr10 123053319 123053491 -17263274 + L2 LINE L2 2921 3085 -228 713 248 111 22 chr10 123053494 123053774 -17262991 + MLT1J LTR MaLR 5 278 -168 351 345 0 0 chr10 123054061 123054145 -17262620 + L2 LINE L2 3134 3217 -55 779 247 94 26 chr10 123054147 123054528 -17262237 + HsTC2 DNA Tc2 44 739 -1159 537 277 23 17 chr10 123054532 123054709 -17262056 + HsTC2 DNA Tc2 1284 1637 -261 2205 127 0 13 chr10 123055487 123055803 -17260962 + AluSx SINE Alu 1 312 0 281 301 59 47 chr10 123055820 123056056 -17260709 + L1MCc LINE L1 1284 1522 -4901 1615 145 12 0 chr10 123056082 123056330 -17260435 + AluSq SINE Alu 58 308 -5 1330 165 19 148 chr10 123056352 123056601 -17260164 + L1MC/D LINE L1 5134 5288 -1047 2522 70 0 0 chr10 123056601 123056899 -17259866 + AluY SINE Alu 1 298 -13 1330 165 19 148 chr10 123056899 123057170 -17259595 + L1MC/D LINE L1 5288 5592 -743 874 94 282 12 chr10 123057175 123057345 -17259420 - AluSg/x SINE Alu -1 308 93 1852 106 0 0 chr10 123057347 123057582 -17259183 - AluSq SINE Alu -78 235 1 645 56 0 0 chr10 123058010 123058100 -17258665 + (GA)n Simple_repeat Simple_repeat 2 91 0 2236 67 63 7 chr10 123058829 123059114 -17257651 - AluY SINE Alu -10 301 1 1813 162 0 58 chr10 123059119 123059446 -17257319 - AluSx SINE Alu -4 308 1 1998 242 32 19 chr10 123059518 123060108 -17256657 + L1M4 LINE L1 4505 5102 -1044 469 303 26 50 chr10 123060281 123060468 -17256297 + ERVL LTR ERVL 4505 4557 -439 2458 102 27 21 chr10 123060468 123060841 -17255924 + THE1C LTR MaLR 1 375 0 469 303 26 50 chr10 123060841 123060978 -17255787 + ERVL LTR ERVL 4557 4696 -300 424 313 153 57 chr10 123061230 123061460 -17255305 - HERV16 LTR ERVL -4688 308 45 1991 155 0 3 chr10 123061460 123061756 -17255009 - AluSx SINE Alu -17 295 1 424 313 153 57 chr10 123061756 123061806 -17254959 - HERV16 LTR ERVL -4951 45 1 403 314 77 14 chr10 123061810 123062081 -17254684 - LTR16B LTR ERVL -8 450 151 358 230 103 0 chr10 123063933 123064020 -17252745 + MIR SINE MIR 88 183 -79 415 298 18 58 chr10 123065000 123065130 -17251635 + MER5A DNA MER1_type 21 144 -45 1909 157 10 13 chr10 123065130 123065436 -17251329 + AluJb SINE Alu 1 305 -7 415 298 18 58 chr10 123065436 123065476 -17251289 + MER5A DNA MER1_type 144 184 -5 676 288 27 18 chr10 123065551 123065773 -17250992 - MIR SINE MIR -38 224 1 376 280 28 9 chr10 123065779 123065886 -17250879 - MIR SINE MIR -74 134 26 2226 134 0 0 chr10 123066172 123066471 -17250294 - AluSx SINE Alu -12 300 2 2098 130 0 22 chr10 123066600 123066915 -17249850 + AluSc SINE Alu 1 308 -1 206 118 0 29 chr10 123067455 123067489 -17249276 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 390 234 85 0 chr10 123067542 123067636 -17249129 - MIR SINE MIR -22 240 139 196 236 0 42 chr10 123067818 123067890 -17248875 - L2 LINE L2 -420 2893 2825 321 296 35 0 chr10 123068406 123068521 -17248244 - MLT1L LTR MaLR -1 614 496 2157 104 50 3 chr10 123068961 123069258 -17247507 - AluSx SINE Alu -1 311 1 271 286 97 65 chr10 123069332 123069486 -17247279 - MIR SINE MIR -21 241 83 2137 130 10 16 chr10 123069610 123069918 -17246847 - AluSx SINE Alu -6 306 1 1034 119 14 0 chr10 123069918 123070061 -17246704 - AluSq/x SINE Alu -168 145 1 1729 133 70 37 chr10 123070082 123070382 -17246383 + AluJb SINE Alu 3 312 0 986 180 18 37 chr10 123070402 123070619 -17246146 - MER20 DNA MER1_type 0 219 7 942 208 22 22 chr10 123070630 123070813 -17245952 + MER5A DNA MER1_type 1 183 -6 631 289 38 0 chr10 123070818 123070977 -17245788 + MER5B DNA MER1_type 14 178 0 275 294 214 30 chr10 123071630 123071858 -17244907 + L2 LINE L2 2477 2662 -652 2081 135 0 14 chr10 123071858 123072154 -17244611 + AluSx SINE Alu 9 300 -12 1809 207 85 43 chr10 123072162 123072645 -17244120 - MLT1D LTR MaLR -2 503 1 275 294 214 30 chr10 123072645 123072771 -17243994 + L2 LINE L2 2667 2907 -407 369 245 82 75 chr10 123072796 123072955 -17243810 - MER91A DNA MER1_type -22 174 15 2194 134 0 0 chr10 123073113 123073411 -17243354 - AluSx SINE Alu -14 298 1 187 432 0 0 chr10 123073520 123073601 -17243164 + L2 LINE L2 3134 3214 -58 186 118 0 0 chr10 123073621 123073655 -17243110 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 343 317 35 4 chr10 123074206 123074356 -17242409 + MIR SINE MIR 13 164 -71 378 230 220 47 chr10 123074425 123074616 -17242149 - MIR SINE MIR -7 255 32 2220 128 0 0 chr10 123074826 123075124 -17241641 - AluSq SINE Alu -15 298 1 5569 220 32 17 chr10 123076865 123079033 -17237732 + L1M3f LINE L1 14 2217 -4066 1462 214 78 24 chr10 123079322 123079692 -17237073 + LTR16C LTR ERVL 85 474 -17 2241 116 17 3 chr10 123079796 123080097 -17236668 - AluSx SINE Alu -7 305 1 229 167 0 21 chr10 123080620 123080668 -17236097 - L2 LINE L2 -1 3271 3225 427 308 47 29 chr10 123080988 123081062 -17235703 - MER5B DNA MER1_type 0 178 107 1194 204 10 91 chr10 123081062 123081468 -17235297 - MLT1A2 LTR MaLR -1 373 1 427 308 47 29 chr10 123081468 123081565 -17235200 - MER5B DNA MER1_type -71 107 4 221 290 0 60 chr10 123082518 123082618 -17234147 - MIR SINE MIR -104 158 65 185 272 43 33 chr10 123083830 123083922 -17232843 + L2 LINE L2 3180 3272 0 334 306 65 0 chr10 123084229 123084337 -17232428 + MER69 DNA AcHobo 9 123 -1103 * 615 179 98 29 chr10 123084322 123084495 -17232270 + MER69 DNA AcHobo 2342 2526 0 660 158 176 118 chr10 123084667 123084946 -17231819 - MER51C LTR ERV1 0 640 346 362 211 0 0 chr10 123085396 123085472 -17231293 + MIR SINE MIR 152 227 -35 2411 70 0 41 chr10 123085498 123085812 -17230953 + AluY SINE Alu 1 301 -10 1827 153 37 3 chr10 123085835 123086130 -17230635 - AluJo SINE Alu -7 305 1 1013 104 0 8 chr10 123086132 123086266 -17230499 - AluJo/FLAM SINE Alu -179 133 1 1817 155 86 3 chr10 123086713 123087049 -17229716 + THE1B LTR MaLR 1 364 0 226 266 13 38 chr10 123087313 123087392 -17229373 - MER5B DNA MER1_type -73 105 29 338 292 18 35 chr10 123088093 123088206 -17228559 - L2 LINE L2 -4 3309 3199 410 239 94 0 chr10 123090019 123090136 -17226629 + L2 LINE L2 3144 3271 -1 388 271 186 27 chr10 123090326 123090514 -17226251 - MIR SINE MIR -26 236 19 2312 115 0 0 chr10 123090681 123090976 -17225789 + AluSx SINE Alu 1 295 -17 201 355 65 9 chr10 123091023 123091130 -17225635 + L2 LINE L2 3191 3303 -10 777 244 46 13 chr10 123091595 123091930 -17224835 - MER31B LTR ERV1 0 466 1 1200 196 137 28 chr10 123091990 123092347 -17224418 + MSTD LTR MaLR 1 396 0 777 191 0 0 chr10 123092529 123092660 -17224105 - FLAM_A SINE Alu -2 131 1 21 36 0 0 chr10 123093525 123093553 -17223212 + AT_rich Low_complexity Low_complexity 1 28 0 1528 205 28 14 chr10 123093871 123094227 -17222538 - MLT1A1 LTR MaLR 0 365 5 852 197 0 5 chr10 123094306 123094724 -17222041 + CT-rich Low_complexity Low_complexity 1 416 0 332 220 27 65 chr10 123094742 123094853 -17221912 - MLT2B3 LTR ERVL -223 297 200 1648 158 8 11 chr10 123094853 123095119 -17221646 - AluJo SINE Alu -22 290 26 843 208 40 5 chr10 123095390 123095592 -17221173 - MLT2B3 LTR ERVL -345 209 1 929 141 0 0 chr10 123096039 123096167 -17220598 + AluSc SINE Alu 167 294 -15 2275 103 19 27 chr10 123096179 123096546 -17220219 + THE1B LTR MaLR 1 364 0 323 298 30 23 chr10 123097276 123097407 -17219358 + MIR3 SINE MIR 51 182 -26 630 177 0 0 chr10 123097525 123097638 -17219127 + AluJb SINE Alu 200 312 0 259 292 161 47 chr10 123098759 123098995 -17217770 - L2 LINE L2 -19 3294 3032 199 333 0 0 chr10 123099085 123099163 -17217602 - L2 LINE L2 -337 2977 2900 275 236 143 0 chr10 123099204 123099344 -17217421 - L2 LINE L2 -337 2977 2818 181 361 57 46 chr10 123099466 123099729 -17217036 - L2 LINE L2 -449 2865 2600 1568 274 36 20 chr10 123100193 123101166 -17215599 - L1MEc LINE L1 -3426 2789 1845 204 40 0 0 chr10 123102017 123102042 -17214723 + (GA)n Simple_repeat Simple_repeat 2 26 0 204 40 0 0 chr10 123102552 123102577 -17214188 + (GA)n Simple_repeat Simple_repeat 2 26 0 496 371 34 7 chr10 123102580 123102874 -17213891 - L1ME LINE L1 -536 5626 5325 237 358 33 0 chr10 123103189 123103309 -17213456 - MIR SINE MIR -70 192 69 329 282 62 70 chr10 123103883 123104110 -17212655 + Charlie2 DNA MER1_type 98 322 -2460 970 230 97 48 chr10 123104139 123104318 -17212447 + Charlie2 DNA MER1_type 2230 2399 -463 1846 158 14 4 chr10 123104318 123104597 -17212168 - AluJo SINE Alu -25 287 6 1304 114 0 31 chr10 123104602 123104829 -17211936 - L1PA16 LINE L1 -1 6165 5946 970 230 97 48 chr10 123104829 123105231 -17211534 + Charlie2 DNA MER1_type 2402 2846 -16 363 215 86 21 chr10 123105396 123105489 -17211276 + L2 LINE L2 3213 3311 -2 663 251 88 4 chr10 123105493 123105720 -17211045 - MIR SINE MIR -8 254 9 26 64 0 0 chr10 123107087 123107134 -17209631 + GC_rich Low_complexity Low_complexity 1 47 0 2237 126 3 0 chr10 123108802 123109112 -17207653 - AluSx SINE Alu -1 311 1 2185 135 0 0 chr10 123109654 123109966 -17206799 - AluSx SINE Alu 0 312 1 658 184 73 0 chr10 123111648 123111784 -17204981 - MER45A DNA AcHobo 0 178 33 2289 113 0 3 chr10 123112732 123113033 -17203732 - AluSx SINE Alu -11 301 2 242 323 134 37 chr10 123113378 123113542 -17203223 - MIR3 SINE MIR -6 202 23 180 0 0 0 chr10 123114050 123114070 -17202695 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2022 98 29 11 chr10 123114070 123114345 -17202420 - AluSx SINE Alu -32 280 1 409 302 39 0 chr10 123116403 123116532 -17200233 + MIR3 SINE MIR 70 203 -5 221 187 26 32 chr10 123116755 123116835 -17199930 + MIR SINE MIR 78 143 -65 231 187 98 12 chr10 123117906 123117994 -17198771 + MIR3 SINE MIR 116 215 -47 1839 140 0 78 chr10 123118029 123118362 -17198403 - AluSx SINE Alu 0 309 1 190 311 56 11 chr10 123118707 123118797 -17197968 - MIR SINE MIR -11 251 158 2218 108 0 3 chr10 123119645 123119932 -17196833 + AluSx SINE Alu 5 290 -22 267 296 7 104 chr10 123123537 123123672 -17193093 + MIR3 SINE MIR 81 202 -6 207 200 0 0 chr10 123123682 123123722 -17193043 + (ATG)n Simple_repeat Simple_repeat 3 42 0 393 256 50 28 chr10 123124647 123124827 -17191938 - HAL1 LINE L1 0 2507 2324 1381 78 0 0 chr10 123124843 123125010 -17191755 - AluSg/x SINE Alu -13 299 133 619 262 19 31 chr10 123125123 123125379 -17191386 - HAL1 LINE L1 -282 2225 1973 780 270 149 33 chr10 123125475 123126179 -17190586 - HAL1 LINE L1 -683 1824 1039 467 257 127 108 chr10 123126281 123126697 -17190068 - HAL1 LINE L1 -2083 424 1 654 201 27 7 chr10 123126803 123126952 -17189813 - MER41D LTR ERV1 0 557 406 * 993 152 0 0 chr10 123126951 123127116 -17189649 - MER41D LTR ERV1 -373 184 20 1120 139 18 67 chr10 123127152 123127271 -17189494 + AluJo SINE Alu 1 105 -207 261 0 0 0 chr10 123127271 123127300 -17189465 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1120 139 18 67 chr10 123127300 123127403 -17189362 + AluJo SINE Alu 105 212 -100 713 88 0 0 chr10 123127403 123127494 -17189271 - AluSp/q SINE Alu -33 280 190 696 170 0 31 chr10 123127828 123127987 -17188778 + L1MB7 LINE L1 5984 6137 -47 2194 109 3 0 chr10 123127987 123128280 -17188485 - AluSg SINE Alu -16 294 1 880 155 7 7 chr10 123128745 123128893 -17187872 - AluJb SINE Alu -12 300 153 793 181 7 27 chr10 123130406 123130555 -17186210 + AluSg/x SINE Alu 137 282 -30 2484 86 0 0 chr10 123131883 123132187 -17184578 + AluSx SINE Alu 1 304 -8 480 147 18 9 chr10 123134883 123134992 -17181773 + (TG)n Simple_repeat Simple_repeat 1 110 0 726 190 0 0 chr10 123135009 123135298 -17181467 + (CA)n Simple_repeat Simple_repeat 1 289 0 663 180 0 27 chr10 123135318 123135501 -17181264 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 317 260 48 19 chr10 123135577 123135681 -17181084 + MIR SINE MIR 41 147 -115 243 103 0 0 chr10 123137992 123138031 -17178734 + (TG)n Simple_repeat Simple_repeat 2 40 0 407 195 13 0 chr10 123138146 123138223 -17178542 + MIR SINE MIR 114 191 -71 268 260 52 13 chr10 123141657 123141734 -17175031 + MIR SINE MIR 55 134 -128 1374 206 56 21 chr10 123142083 123142370 -17174395 + AluJb SINE Alu 1 297 -15 2048 159 0 6 chr10 123142404 123142718 -17174047 + AluSx SINE Alu 1 312 0 207 231 0 77 chr10 123142886 123142938 -17173827 + L3 LINE CR1 1519 1566 -11 25 65 0 0 chr10 123143567 123143613 -17173152 + AT_rich Low_complexity Low_complexity 1 46 0 2458 37 54 0 chr10 123147172 123147467 -17169298 + AluY SINE Alu 1 311 0 389 247 143 32 chr10 123147680 123147834 -17168931 - MIR SINE MIR -42 220 50 23 0 0 0 chr10 123151617 123151640 -17165125 + AT_rich Low_complexity Low_complexity 1 23 0 201 139 0 0 chr10 123154462 123154505 -17162260 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2326 81 3 0 chr10 123154599 123154884 -17161881 - AluSq SINE Alu -27 286 1 295 232 181 58 chr10 123155130 123155268 -17161497 + MER5A DNA MER1_type 35 189 0 21 57 0 0 chr10 123156106 123156141 -17160624 + AT_rich Low_complexity Low_complexity 1 35 0 323 288 139 45 chr10 123156672 123156939 -17159826 - L1ME4a LINE L1 -26 6095 5804 2176 120 0 13 chr10 123156941 123157250 -17159515 - AluJb SINE Alu -7 305 1 2256 85 7 0 chr10 123157329 123157623 -17159142 + AluY SINE Alu 1 296 -15 754 155 0 31 chr10 123157647 123157776 -17158989 + FLAM_A SINE Alu 4 128 -5 433 279 163 63 chr10 123157801 123158120 -17158645 - L3 LINE CR1 -801 776 426 21 0 0 0 chr10 123159201 123159222 -17157543 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 123159316 123159337 -17157428 + AT_rich Low_complexity Low_complexity 1 21 0 1888 221 120 6 chr10 123159725 123160385 -17156380 + L1M4 LINE L1 2550 3284 -2862 3964 127 37 35 chr10 123160388 123161137 -17155628 + L1MA6 LINE L1 5463 6213 -87 629 165 0 0 chr10 123161137 123161240 -17155525 + AluJb SINE Alu 194 296 -16 364 188 59 0 chr10 123161447 123161532 -17155233 + L1ME1 LINE L1 2616 2705 -3441 3942 206 105 29 chr10 123161648 123163573 -17153192 + L1ME1 LINE L1 3663 5730 -436 392 182 13 0 chr10 123163605 123163682 -17153083 + Tigger5 DNA MER2_type 1 78 -2245 248 200 43 29 chr10 123163683 123163753 -17153012 - Tigger5 DNA MER2_type -4 2319 2249 364 125 0 47 chr10 123163758 123163822 -17152943 + Tigger5 DNA MER2_type 2263 2323 0 479 212 68 0 chr10 123163829 123163947 -17152818 + L1ME1 LINE L1 6032 6157 -9 385 255 84 50 chr10 123164317 123164556 -17152209 - HAL1 LINE L1 -8 2499 2253 229 203 72 43 chr10 123164956 123165025 -17151740 + MER8 DNA MER2_type 1 71 -168 3374 102 51 3 chr10 123165372 123165962 -17150803 - L1PBa LINE L1 -4544 2319 1702 1783 165 35 49 chr10 123166684 123167054 -17149711 + MLT1A1 LTR MaLR 1 365 0 2115 124 24 0 chr10 123167071 123167362 -17149403 - AluSx SINE Alu -14 298 1 2723 66 0 27 chr10 123168714 123169079 -17147686 + THE1A LTR MaLR 1 355 0 11607 83 19 4 chr10 123169079 123170636 -17146129 + THE1A-int LTR MaLR 1 1580 0 2641 82 8 3 chr10 123170636 123170989 -17145776 + THE1A LTR MaLR 1 355 0 451 354 31 0 chr10 123170989 123171150 -17145615 + MER8 DNA MER2_type 14 179 -60 2076 120 3 3 chr10 123171209 123171516 -17145249 + AluSx SINE Alu 1 307 0 501 62 0 0 chr10 123171518 123171583 -17145182 + (CA)n Simple_repeat Simple_repeat 2 66 0 745 166 62 0 chr10 123171649 123171794 -17144971 - MER46A DNA MER2_type -82 154 1 381 200 113 50 chr10 123171658 123171818 -17144947 + MER46A DNA MER2_type 1 170 -66 * 456 296 83 0 chr10 123171940 123172072 -17144693 + MIR SINE MIR 49 191 -71 1316 172 75 5 chr10 123172748 123173059 -17143706 - L1MD3 LINE L1 0 8042 7726 282 191 16 0 chr10 123173236 123173299 -17143466 + L1ME4a LINE L1 5989 6052 -69 319 330 34 22 chr10 123174124 123174303 -17142462 - L3b LINE CR1 -167 1416 1236 443 257 250 0 chr10 123174553 123174705 -17142060 - MIR SINE MIR -27 235 46 885 251 31 18 chr10 123174731 123174954 -17141811 + MIR SINE MIR 5 230 -32 469 297 64 36 chr10 123175788 123176007 -17140758 - MIR SINE MIR -6 256 32 236 347 61 65 chr10 123176016 123176391 -17140374 + L2 LINE L2 2719 3111 -161 1003 240 121 39 chr10 123177736 123178199 -17138566 - LTR33A LTR ERVL -21 502 2 201 346 58 19 chr10 123178515 123178619 -17138146 - L2 LINE L2 -17 3255 3148 1300 167 87 3 chr10 123179235 123179534 -17137231 + MER33 DNA MER1_type 1 324 0 2156 113 23 0 chr10 123181375 123181676 -17135089 + AluSx SINE Alu 1 308 -4 1679 166 0 53 chr10 123182454 123182774 -17133991 + AluJo SINE Alu 1 303 -9 307 278 21 10 chr10 123182895 123182992 -17133773 + MLT1J LTR MaLR 119 216 -295 335 167 56 14 chr10 123184186 123184258 -17132507 - MER53 DNA DNA -85 104 30 184 273 146 55 chr10 123184267 123184377 -17132388 + L2 LINE L2 3017 3136 -177 418 301 44 0 chr10 123184500 123184613 -17132152 + L2 LINE L2 3196 3313 0 306 0 0 0 chr10 123185457 123185491 -17131274 + (CA)n Simple_repeat Simple_repeat 2 35 0 663 249 48 32 chr10 123185493 123185682 -17131083 + MIR SINE MIR 71 262 0 414 253 63 0 chr10 123186381 123186476 -17130289 + MER99 DNA DNA 2 102 -726 4392 174 60 14 chr10 123186587 123187723 -17129042 + L1MB8 LINE L1 4978 6176 -2 310 127 127 56 chr10 123188170 123188241 -17128524 + LTR54B LTR ERV1 4 79 -419 1073 260 69 31 chr10 123188305 123188624 -17128141 + MER57-int LTR ERV1 1910 2240 -4091 275 224 92 31 chr10 123188600 123188698 -17128067 + MER57-int LTR ERV1 333 436 -7101 * 585 215 19 111 chr10 123188922 123189162 -17127603 + MER57-int LTR ERV1 467 3329 -4208 1870 128 66 0 chr10 123190000 123190289 -17126476 + AluSx SINE Alu 1 308 -4 4114 199 53 63 chr10 123190381 123191459 -17125306 + MER57-int LTR ERV1 2581 3669 -1213 2390 110 0 0 chr10 123191459 123191768 -17124997 - AluSx SINE Alu -3 309 1 4114 199 53 63 chr10 123191768 123191880 -17124885 + MER57-int LTR ERV1 3669 3781 -1101 2165 118 18 32 chr10 123191880 123192260 -17124505 + THE1C LTR MaLR 1 375 0 4114 199 53 63 chr10 123192260 123192630 -17124135 + MER57-int LTR ERV1 3781 4114 -768 380 324 17 23 chr10 123192613 123192669 -17124096 + MER70-int LTR ERVL 3683 3738 -1285 * 381 185 0 0 chr10 123192669 123192734 -17124031 + MER57-int LTR ERV1 4110 4174 -697 380 324 17 23 chr10 123192734 123192786 -17123979 + MER70-int LTR ERVL 3738 3854 -1169 * 2297 219 46 10 chr10 123192778 123193314 -17123451 + MER57-int LTR ERV1 4163 7118 -419 1220 166 237 24 chr10 123193363 123193772 -17122993 + LTR54B LTR ERV1 1 496 -2 1108 221 70 27 chr10 123193965 123194469 -17122296 + MER99 DNA DNA 192 755 -73 1236 167 0 27 chr10 123194469 123194690 -17122075 - AluJb SINE Alu -5 307 93 569 163 101 34 chr10 123194708 123194886 -17121879 + LTR54B LTR ERV1 281 470 -28 400 143 0 0 chr10 123194887 123194950 -17121815 - AluJ/FLAM SINE Alu -249 63 1 288 203 76 25 chr10 123194950 123195029 -17121736 + MER99 DNA DNA 742 824 -4 870 70 86 0 chr10 123195513 123195641 -17121124 + MER85 DNA T2_type 1 139 0 1679 190 0 0 chr10 123195732 123196016 -17120749 + AluJb SINE Alu 5 288 -24 629 100 0 10 chr10 123196016 123196116 -17120649 + (GGGA)n Simple_repeat Simple_repeat 2 100 0 185 331 112 24 chr10 123196317 123196486 -17120279 + L2 LINE L2 2227 2410 -904 222 254 17 0 chr10 123197269 123197328 -17119437 + (TAG)n Simple_repeat Simple_repeat 1 60 0 678 260 45 0 chr10 123197330 123197507 -17119258 - MIR SINE MIR -21 241 57 266 326 69 21 chr10 123198206 123198350 -17118415 - L3b LINE CR1 -122 1461 1311 2379 96 0 0 chr10 123198565 123198867 -17117898 - AluSp SINE Alu -11 302 1 2207 125 3 3 chr10 123198896 123199208 -17117557 + AluSx SINE Alu 1 312 0 275 291 226 25 chr10 123199228 123199427 -17117338 + MIR SINE MIR 2 240 -22 1361 187 0 79 chr10 123200274 123200600 -17116165 + AluJb SINE Alu 1 302 0 997 266 145 42 chr10 123200618 123200921 -17115844 + L1M4c LINE L1 895 1165 -5398 213 94 0 0 chr10 123200921 123200953 -17115812 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 997 266 145 42 chr10 123200953 123201592 -17115173 + L1M4c LINE L1 1165 2081 -4482 1073 235 72 107 chr10 123201598 123202045 -17114720 + L1MC4 LINE L1 6105 6443 -1365 1469 148 124 30 chr10 123202045 123202375 -17114390 - MER46B DNA MER2_type 0 236 1 1073 235 72 107 chr10 123202375 123202921 -17113844 + L1MC4 LINE L1 6443 7006 -802 1325 81 0 0 chr10 123203012 123203173 -17113592 + AluY SINE Alu 134 294 -17 25 0 0 0 chr10 123203342 123203367 -17113398 + AT_rich Low_complexity Low_complexity 1 25 0 189 214 122 51 chr10 123203864 123203962 -17112803 - MIR SINE MIR -147 115 11 1279 226 97 0 chr10 123205546 123205855 -17110910 + MER58B DNA MER1_type 2 340 -1 493 329 140 34 chr10 123205863 123206155 -17110610 - L2 LINE L2 -422 2892 2570 257 288 0 0 chr10 123206157 123206216 -17110549 + MIR3 SINE MIR 136 194 -14 2601 126 112 2 chr10 123206304 123206741 -17110024 + MER31A LTR ERV1 1 485 0 1954 141 56 3 chr10 123207537 123207856 -17108909 + MER2 DNA MER2_type 1 336 -9 737 264 66 19 chr10 123207953 123208165 -17108600 - MIR SINE MIR -13 249 28 345 62 0 0 chr10 123208442 123208490 -17108275 + (CA)n Simple_repeat Simple_repeat 1 48 0 1967 142 0 39 chr10 123208539 123208849 -17107916 - AluSx SINE Alu -14 298 1 2753 246 72 49 chr10 123210208 123210446 -17106319 + L1M4b LINE L1 11 242 -6617 2505 63 0 0 chr10 123210446 123210747 -17106018 - AluY SINE Alu -10 301 1 2753 246 72 49 chr10 123210747 123211738 -17105027 + L1M4b LINE L1 242 1443 -5416 180 26 53 26 chr10 123211738 123211776 -17104989 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2753 246 72 49 chr10 123211776 123211834 -17104931 + L1M4b LINE L1 1443 1498 -5361 632 136 9 18 chr10 123211836 123211946 -17104819 - MER4B LTR ERV1 -325 285 177 337 221 18 44 chr10 123211978 123212018 -17104747 + L1M4b LINE L1 1512 1552 -5307 2423 55 31 0 chr10 123212018 123212311 -17104454 + AluSq SINE Alu 1 302 -11 337 221 18 44 chr10 123212311 123212383 -17104382 + L1M4b LINE L1 1552 1621 -5238 701 142 26 84 chr10 123212388 123212543 -17104222 + MER4B LTR ERV1 1 146 -464 1332 236 38 111 chr10 123212551 123213211 -17103554 + LTR9 LTR ERV1 1 612 0 2778 110 17 13 chr10 123213267 123213704 -17103061 + MER4E LTR ERV1 209 766 0 334 217 0 14 chr10 123213704 123213876 -17102889 + L1M4b LINE L1 1617 1846 -5111 1217 201 7 20 chr10 123213899 123214192 -17102573 + L1MB8 LINE L1 5888 6176 -2 262 251 217 29 chr10 123214342 123214517 -17102248 - MIR SINE MIR -3 259 52 1261 214 56 41 chr10 123214531 123214872 -17101893 - MLT1B LTR MaLR -44 346 1 187 308 13 51 chr10 123214995 123215073 -17101692 - MIR SINE MIR -54 208 134 363 262 189 15 chr10 123215106 123215312 -17101453 + HAL1 LINE L1 1675 1916 -591 1289 149 0 0 chr10 123215580 123215775 -17100990 + AluJo SINE Alu 1 195 -117 198 103 0 0 chr10 123215802 123215831 -17100934 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 289 304 56 24 chr10 123216056 123216181 -17100584 - L2 LINE L2 -180 3092 2964 216 211 0 58 chr10 123216212 123216264 -17100501 - L2 LINE L2 0 3313 3265 931 150 126 24 chr10 123216345 123216552 -17100213 - MER96B DNA MER1_type? 0 417 190 341 296 160 12 chr10 123216872 123217041 -17099724 + MIR SINE MIR 31 224 -38 280 365 168 22 chr10 123217065 123217429 -17099336 - L2 LINE L2 -536 2778 2362 1253 217 48 88 chr10 123217465 123217885 -17098880 - MLT1J LTR MaLR -106 405 3 2044 147 102 31 chr10 123217910 123218332 -17098433 + LTR47A LTR ERVL 1 452 0 2179 114 3 0 chr10 123218461 123218759 -17098006 + AluSx SINE Alu 1 299 -13 1232 110 0 0 chr10 123218759 123218923 -17097842 + AluSg/x SINE Alu 132 295 -15 4180 166 28 65 chr10 123220210 123220898 -17095867 + L1MB7 LINE L1 4665 5376 -808 895 196 0 0 chr10 123220898 123221051 -17095714 + FRAM SINE Alu 4 156 -10 4180 166 28 65 chr10 123221051 123221936 -17094829 + L1MB7 LINE L1 5376 6184 0 580 216 27 0 chr10 123222102 123222213 -17094552 - MER81 DNA DNA 0 114 1 262 320 81 57 chr10 123222385 123222769 -17093996 - L2 LINE L2 -1308 2006 1614 1952 164 39 0 chr10 123224852 123225187 -17091578 - MER7A DNA MER2_type 0 346 1 2382 77 3 0 chr10 123226095 123226392 -17090373 - AluSg SINE Alu -12 298 1 23 68 0 0 chr10 123227711 123227755 -17089010 + GC_rich Low_complexity Low_complexity 1 44 0 235 236 14 28 chr10 123227824 123227896 -17088869 + G-rich Low_complexity Low_complexity 6 76 0 2161 96 0 68 chr10 123229324 123229648 -17087117 - AluSx SINE Alu -10 302 1 343 303 34 0 chr10 123231008 123231127 -17085638 - L2 LINE L2 -2 3311 3189 1731 151 16 44 chr10 123231153 123231470 -17085295 - AluJo SINE Alu -3 309 2 214 312 136 8 chr10 123231489 123231614 -17085151 + L3 LINE CR1 1317 1457 -120 2083 117 0 0 chr10 123231639 123231954 -17084811 + AluSx SINE Alu 1 315 0 347 188 14 0 chr10 123232064 123232133 -17084632 - MIR SINE MIR -122 140 71 297 0 0 0 chr10 123232170 123232203 -17084562 + (CA)n Simple_repeat Simple_repeat 2 34 0 835 133 8 0 chr10 123232442 123232562 -17084203 - AluSq/x SINE Alu -192 121 1 28 61 0 0 chr10 123232978 123233027 -17083738 + AT_rich Low_complexity Low_complexity 1 49 0 368 312 36 65 chr10 123233225 123233501 -17083264 + MER102b DNA MER1_type 71 338 -3 2259 112 0 0 chr10 123233663 123233950 -17082815 + AluSx SINE Alu 1 287 -25 207 0 0 0 chr10 123233954 123233977 -17082788 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2052 99 85 0 chr10 123233988 123234270 -17082495 + AluSx SINE Alu 1 306 -6 1766 114 88 0 chr10 123235200 123235462 -17081303 - AluSq SINE Alu -20 293 9 1891 133 7 0 chr10 123235685 123235982 -17080783 - AluSx SINE Alu 0 310 12 342 155 310 93 chr10 123236441 123236507 -17080258 + MER58C DNA MER1_type 59 109 -2311 438 108 0 0 chr10 123236507 123236572 -17080193 + (TGG)n Simple_repeat Simple_repeat 1 65 0 342 155 310 93 chr10 123236572 123236634 -17080131 + MER58C DNA MER1_type 109 215 0 268 203 54 27 chr10 123238156 123238230 -17078535 + CT-rich Low_complexity Low_complexity 3 78 0 438 272 179 0 chr10 123238370 123238543 -17078222 + L2 LINE L2 2830 3033 -280 222 128 0 0 chr10 123238626 123238665 -17078100 + (TG)n Simple_repeat Simple_repeat 2 40 0 239 108 54 0 chr10 123238681 123238718 -17078047 - L1ME3A LINE L1 -49 6121 6083 357 86 0 0 chr10 123238882 123238940 -17077825 + (CA)n Simple_repeat Simple_repeat 2 59 0 2017 122 42 39 chr10 123241078 123241415 -17075350 + MER2 DNA MER2_type 2 339 -6 894 206 83 44 chr10 123241903 123242131 -17074634 + Charlie1 DNA MER1_type 1 237 -2524 663 201 0 7 chr10 123242120 123242259 -17074506 + Charlie1 DNA MER1_type 2623 2760 -1 * 22 0 0 0 chr10 123242333 123242355 -17074410 + AT_rich Low_complexity Low_complexity 1 22 0 2276 116 3 3 chr10 123243383 123243693 -17073072 - AluSx SINE Alu -2 310 1 1967 142 0 3 chr10 123243701 123243989 -17072776 - AluJb SINE Alu -25 287 1 472 275 7 28 chr10 123244310 123244452 -17072313 - MIR SINE MIR -79 183 45 575 51 13 13 chr10 123244685 123244764 -17072001 + MADE1 DNA Mariner 2 80 0 705 206 149 21 chr10 123245004 123245285 -17071480 - L1MC5 LINE L1 -36 7925 7609 2474 97 0 0 chr10 123245300 123245611 -17071154 - AluSx SINE Alu -1 311 1 1969 144 7 7 chr10 123245690 123245982 -17070783 - AluSx SINE Alu -18 294 3 189 379 10 48 chr10 123247306 123247356 -17069409 - L2 LINE L2 -33 3239 3193 791 244 63 31 chr10 123247356 123247610 -17069155 - MIR SINE MIR 0 262 1 189 379 10 48 chr10 123247610 123247662 -17069103 - L2 LINE L2 -79 3193 3141 204 333 54 0 chr10 123248718 123248811 -17067954 - MIR SINE MIR -6 256 159 1323 191 23 33 chr10 123250086 123250389 -17066376 + LTR8A LTR ERV1 428 727 0 191 429 20 0 chr10 123250472 123250570 -17066195 - MIR SINE MIR -59 149 50 399 257 29 29 chr10 123250631 123250767 -17065998 - L3 LINE CR1 -89 1488 1353 1843 167 31 3 chr10 123251117 123251405 -17065360 + AluJo SINE Alu 2 297 -15 2197 193 131 39 chr10 123251414 123252057 -17064708 - L1ME3A LINE L1 0 6170 5469 2273 76 38 3 chr10 123252184 123252473 -17064292 - AluY SINE Alu -12 299 1 2093 137 7 3 chr10 123252531 123252838 -17063927 + AluSg SINE Alu 1 308 -2 996 231 81 0 chr10 123252840 123253061 -17063704 + MIR SINE MIR 20 258 -4 1991 159 0 0 chr10 123253265 123253574 -17063191 - AluJo SINE Alu -3 309 1 368 252 189 15 chr10 123253842 123254048 -17062717 - HAL1 LINE L1 -591 1916 1675 1304 214 56 41 chr10 123254282 123254623 -17062142 + MLT1B LTR MaLR 1 346 -44 203 257 217 29 chr10 123254637 123254812 -17061953 + MIR SINE MIR 52 259 -3 1245 201 7 20 chr10 123254962 123255255 -17061510 - L1MB8 LINE L1 -2 6176 5888 314 204 41 29 chr10 123255278 123255450 -17061315 - L1MCa LINE L1 -5111 1846 1617 2837 110 17 13 chr10 123255450 123255887 -17060878 - MER4E LTR ERV1 0 766 209 1382 230 39 112 chr10 123255943 123256603 -17060162 - LTR9 LTR ERV1 0 612 1 714 123 32 90 chr10 123256611 123256766 -17059999 - MER4B LTR ERV1 -464 146 1 345 231 17 43 chr10 123256769 123256843 -17059922 - L1MCa LINE L1 -5236 1623 1552 2467 54 31 0 chr10 123256843 123257137 -17059628 - AluSq SINE Alu -10 303 1 345 231 17 43 chr10 123257137 123257179 -17059586 - L1MCa LINE L1 -5307 1552 1510 651 136 9 18 chr10 123257209 123257319 -17059446 + MER4B LTR ERV1 177 285 -325 1017 248 60 40 chr10 123257321 123257379 -17059386 - L1MCa LINE L1 -5361 1498 1443 180 26 53 26 chr10 123257379 123257417 -17059348 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1017 248 60 40 chr10 123257417 123258387 -17058378 - L1MCa LINE L1 -5416 1443 280 290 24 0 49 chr10 123258408 123258449 -17058316 + AluY SINE Alu 1 39 -263 548 242 181 0 chr10 123259013 123259162 -17057603 - MER45A DNA AcHobo 0 178 3 378 250 118 20 chr10 123259738 123259914 -17056851 + MIR SINE MIR 1 188 -62 232 284 23 0 chr10 123260028 123260146 -17056619 + (TA)n Simple_repeat Simple_repeat 1 120 0 190 352 19 19 chr10 123261053 123261158 -17055607 + L2 LINE L2 3168 3272 0 484 253 56 12 chr10 123261202 123261364 -17055401 - MIR SINE MIR -5 257 89 230 338 95 0 chr10 123261388 123261536 -17055229 + MER5A DNA MER1_type 28 189 0 181 250 14 42 chr10 123261552 123261624 -17055141 - MER5A DNA MER1_type -7 182 113 * 262 237 58 48 chr10 123261570 123261684 -17055081 + MER5A DNA MER1_type 26 132 -46 1632 159 52 17 chr10 123262434 123262724 -17054041 - AluJo SINE Alu -12 300 1 253 248 83 97 chr10 123262876 123263021 -17053744 + MIR SINE MIR 50 192 -70 517 191 16 56 chr10 123263398 123263524 -17053241 - MER63A DNA MER1_type -35 175 55 409 275 185 33 chr10 123263880 123264091 -17052674 + MIR SINE MIR 18 260 -2 1012 251 85 13 chr10 123264407 123264714 -17052051 + LTR16A LTR ERVL 91 419 -31 1936 146 11 11 chr10 123265069 123265356 -17051409 + AluSx SINE Alu 7 293 -19 486 227 150 63 chr10 123265386 123265593 -17051172 - LTR16A1 LTR ERVL -55 402 178 317 243 30 83 chr10 123266055 123266224 -17050541 + MIR SINE MIR 48 207 -55 221 299 92 34 chr10 123266983 123267132 -17049633 + MIR SINE MIR 30 183 -61 235 275 0 0 chr10 123267705 123267774 -17048991 - MIR SINE MIR -3 259 191 200 305 12 24 chr10 123267814 123267896 -17048869 - MIR SINE MIR -168 94 14 212 284 129 35 chr10 123267901 123268017 -17048748 + MIR3 SINE MIR 66 192 -16 180 71 0 0 chr10 123268817 123268845 -17047920 + L2 LINE L2 3027 3054 -218 204 300 0 0 chr10 123269036 123269086 -17047679 + L2 LINE L2 3206 3255 -17 181 250 0 0 chr10 123269400 123269440 -17047325 + MIR SINE MIR 107 146 -116 327 202 133 42 chr10 123269707 123269825 -17046940 - MIR SINE MIR -61 147 70 332 104 0 0 chr10 123270229 123270277 -17046488 - MER53 DNA DNA -138 51 4 363 312 24 0 chr10 123270723 123270848 -17045917 - MIR3 SINE MIR -51 157 30 306 209 133 42 chr10 123271002 123271120 -17045645 - MIR SINE MIR -61 147 70 586 248 21 84 chr10 123272165 123272403 -17044362 + MIR SINE MIR 35 257 -5 587 199 6 3 chr10 123273010 123273362 -17043403 + (CA)n Simple_repeat Simple_repeat 1 353 0 626 229 0 8 chr10 123273402 123273896 -17042869 + (CA)n Simple_repeat Simple_repeat 1 489 0 360 294 56 25 chr10 123276052 123276212 -17040553 + L1MC5 LINE L1 7676 7840 -121 902 219 13 52 chr10 123276216 123276449 -17040316 - MLT1B LTR MaLR -3 387 164 713 160 0 0 chr10 123276452 123276583 -17040182 - FLAM_C SINE Alu 0 143 13 847 225 0 11 chr10 123276593 123276775 -17039990 - MLT1B LTR MaLR -210 180 1 231 116 174 29 chr10 123276775 123276844 -17039921 + L1MC5 LINE L1 7836 7914 -47 376 332 61 28 chr10 123276915 123277129 -17039636 + L3 LINE CR1 1338 1558 -19 351 308 54 59 chr10 123277129 123277350 -17039415 + L3 LINE CR1 958 1177 -400 292 319 67 14 chr10 123277466 123277676 -17039089 - L1MC4a LINE L1 -1898 5910 5690 2277 113 0 0 chr10 123277682 123277973 -17038792 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 123278073 123278097 -17038668 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 2556 74 0 0 chr10 123279167 123279477 -17037288 - AluY SINE Alu -1 310 1 497 286 29 57 chr10 123280015 123280190 -17036575 + MER91A DNA MER1_type 25 194 -2 220 347 0 0 chr10 123286076 123286151 -17030614 + GA-rich Low_complexity Low_complexity 4 78 0 498 129 0 0 chr10 123288186 123288271 -17028494 + (TC)n Simple_repeat Simple_repeat 1 85 0 22 0 0 0 chr10 123293316 123293338 -17023427 + GC_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 123293609 123293631 -17023134 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 * 238 43 64 43 chr10 123293629 123293676 -17023089 + GA-rich Low_complexity Low_complexity 1 48 0 414 57 0 0 chr10 123293796 123293849 -17022916 + (T)n Simple_repeat Simple_repeat 1 53 0 585 181 0 0 chr10 123294324 123294457 -17022308 + CT-rich Low_complexity Low_complexity 1 133 0 278 123 18 0 chr10 123295103 123295160 -17021605 + (TTA)n Simple_repeat Simple_repeat 3 60 0 203 208 169 13 chr10 123297575 123297652 -17019113 + MIR SINE MIR 52 140 -122 511 229 15 15 chr10 123297700 123297831 -17018934 + L1ME1 LINE L1 6029 6159 -7 704 157 67 45 chr10 123297864 123298042 -17018723 + MIR SINE MIR 71 252 -10 195 262 319 0 chr10 123298437 123298578 -17018187 + MIR SINE MIR 74 259 -3 262 244 0 39 chr10 123300780 123300858 -17015907 - MIR SINE MIR -83 179 105 501 282 53 39 chr10 123305213 123305419 -17011346 - MIR SINE MIR -33 229 21 243 309 36 27 chr10 123305651 123305761 -17011004 - MIR SINE MIR -60 202 92 420 20 0 0 chr10 123306188 123306237 -17010528 + (TG)n Simple_repeat Simple_repeat 2 50 0 369 0 0 0 chr10 123306587 123306628 -17010137 + (TA)n Simple_repeat Simple_repeat 2 42 0 323 115 5 10 chr10 123306741 123306801 -17009964 + Alu SINE Alu 1 44 -257 1461 111 5 14 chr10 123306802 123307010 -17009755 + AluSg/x SINE Alu 93 298 -14 810 222 77 14 chr10 123307116 123307368 -17009397 + L1ME2 LINE L1 5896 6166 0 198 0 0 0 chr10 123307399 123307421 -17009344 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2525 56 0 13 chr10 123308027 123308330 -17008435 + AluY SINE Alu 1 299 -12 536 266 90 15 chr10 123309483 123309699 -17007066 - MIR SINE MIR -6 256 27 522 299 40 17 chr10 123309872 123310049 -17006716 - L2 LINE L2 -5 3308 3128 279 0 0 0 chr10 123310059 123310090 -17006675 + (TC)n Simple_repeat Simple_repeat 2 32 0 508 265 107 47 chr10 123310110 123310486 -17006279 + L1MC4a LINE L1 5649 6709 -1126 222 266 153 16 chr10 123311238 123311362 -17005403 + MIR3 SINE MIR 66 206 -2 331 291 0 0 chr10 123311810 123311889 -17004876 - L2 LINE L2 -1 3271 3193 387 280 20 67 chr10 123312329 123312479 -17004286 + MIR SINE MIR 65 207 -55 283 165 129 69 chr10 123312913 123313024 -17003741 + MIR SINE MIR 19 119 -89 2422 103 5 44 chr10 123313143 123313530 -17003235 - THE1C LTR MaLR -3 372 1 22 0 0 0 chr10 123313561 123313583 -17003182 + AT_rich Low_complexity Low_complexity 1 22 0 325 305 97 48 chr10 123313917 123314941 -17001824 - L1M4 LINE L1 -743 5403 4330 254 321 92 8 chr10 123315030 123315161 -17001604 - L1ME4a LINE L1 -3 6118 5977 696 253 96 31 chr10 123315235 123315650 -17001115 - L1ME4a LINE L1 -157 5964 5523 908 189 17 23 chr10 123315652 123315827 -17000938 - AluJo SINE Alu -18 294 121 184 222 48 63 chr10 123317753 123317816 -16998949 - L2 LINE L2 -58 3214 3153 2097 143 7 0 chr10 123317867 123318168 -16998597 + AluJo SINE Alu 1 303 -9 2318 100 13 0 chr10 123318776 123319077 -16997688 + AluY SINE Alu 1 305 -6 654 291 138 18 chr10 123319160 123319500 -16997265 - L2 LINE L2 0 3313 2933 448 276 0 37 chr10 123320159 123320265 -16996500 + MIR SINE MIR 79 181 -81 2621 92 0 16 chr10 123320265 123320635 -16996130 + THE1B LTR MaLR 1 364 0 448 276 0 37 chr10 123320635 123320662 -16996103 + MIR SINE MIR 181 207 -55 835 169 38 16 chr10 123320766 123320950 -16995815 + MER53 DNA DNA 2 189 0 257 180 20 0 chr10 123321071 123321121 -16995644 + L2 LINE L2 3257 3307 -6 1883 179 3 0 chr10 123322568 123322876 -16993889 - AluJb SINE Alu -3 309 1 253 366 77 30 chr10 123323157 123323493 -16993272 - L2 LINE L2 -3 3269 2918 437 344 16 32 chr10 123323530 123323716 -16993049 - MIR SINE MIR -45 217 35 491 168 0 140 chr10 123324121 123324264 -16992501 - MIR SINE MIR -70 192 70 232 292 18 44 chr10 123325134 123325247 -16991518 + MIR3 SINE MIR 3 112 -96 274 350 36 50 chr10 123325382 123325659 -16991106 + L2 LINE L2 2998 3270 -43 428 257 56 42 chr10 123325767 123325911 -16990854 + L2 LINE L2 3163 3308 -5 2241 113 0 0 chr10 123326078 123326362 -16990403 + AluSq SINE Alu 1 284 -29 184 42 0 0 chr10 123326362 123326386 -16990379 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 396 157 0 72 chr10 123326648 123326731 -16990034 + L2 LINE L2 3236 3312 -1 1025 183 104 24 chr10 123327068 123327357 -16989408 - MLT1C LTR MaLR -150 317 6 411 338 38 19 chr10 123327608 123327765 -16989000 - MIR3 SINE MIR -26 182 23 423 273 50 0 chr10 123328170 123328291 -16988474 - MIR SINE MIR -19 243 117 2533 57 0 3 chr10 123328423 123328724 -16988041 - AluY SINE Alu -11 300 1 2143 184 14 9 chr10 123328741 123329170 -16987595 - L1MB7 LINE L1 -10 6174 5744 665 184 109 7 chr10 123329191 123329338 -16987427 - MIR SINE MIR -27 235 74 2019 135 7 10 chr10 123329470 123329767 -16986998 + AluSx SINE Alu 1 296 -16 227 345 9 45 chr10 123331069 123331125 -16985640 + MIR3 SINE MIR 103 155 -53 558 226 102 48 chr10 123331125 123331311 -16985454 + MER117 DNA MER1_type 2 197 0 227 345 9 45 chr10 123331311 123331364 -16985401 + MIR3 SINE MIR 155 208 0 485 254 42 0 chr10 123331757 123331875 -16984890 + MIR SINE MIR 123 245 -17 339 260 19 48 chr10 123334451 123334555 -16982210 - MIR3 SINE MIR -8 200 100 203 306 9 9 chr10 123335637 123335748 -16981017 + (TG)n Simple_repeat Simple_repeat 2 112 0 316 170 40 70 chr10 123336504 123336604 -16980161 - L1MC4a LINE L1 -1901 5907 5811 537 267 81 0 chr10 123336726 123336898 -16979867 - MIR SINE MIR -64 198 13 1017 195 13 87 chr10 123337774 123338072 -16978693 + MER33 DNA MER1_type 49 324 0 1632 136 104 24 chr10 123338346 123338633 -16978132 + AluJo SINE Alu 1 310 -2 433 165 22 11 chr10 123338716 123338807 -16977958 + MIR3 SINE MIR 82 173 -35 474 268 101 12 chr10 123338876 123339044 -16977721 + MIR SINE MIR 79 261 -1 2377 73 0 20 chr10 123339346 123339648 -16977117 + AluSq SINE Alu 1 296 -17 767 268 92 58 chr10 123340117 123340653 -16976112 - L2 LINE L2 0 3313 2774 829 133 37 15 chr10 123340733 123340868 -16975897 + FLAM_C SINE Alu 5 142 -1 205 283 71 40 chr10 123340912 123341011 -16975754 - MIR SINE MIR -56 206 105 2653 242 92 8 chr10 123341117 123341984 -16974781 - L1M4 LINE L1 -2381 3765 2826 255 318 119 0 chr10 123341994 123342120 -16974645 + L2 LINE L2 3171 3311 -2 479 232 78 0 chr10 123342161 123342303 -16974462 + L1ME4a LINE L1 5966 6118 -3 668 277 162 15 chr10 123343692 123344031 -16972734 + MLT1I LTR MaLR 18 406 -3 776 277 75 54 chr10 123344471 123344954 -16971811 + LTR33 LTR ERVL 22 514 -7 430 245 238 7 chr10 123346397 123346540 -16970225 - MER5A DNA MER1_type -7 182 7 415 235 76 34 chr10 123346906 123347025 -16969740 - L2 LINE L2 0 3272 3149 772 238 45 15 chr10 123347102 123347304 -16969461 - MIR SINE MIR -11 251 44 367 235 6 6 chr10 123347655 123347817 -16968948 + (CA)n Simple_repeat Simple_repeat 1 162 0 2450 87 0 0 chr10 123347966 123348265 -16968500 + AluSx SINE Alu 1 299 -13 211 226 88 98 chr10 123348807 123348885 -16967880 - L2 LINE L2 -180 3092 3014 2311 167 45 45 chr10 123348885 123349233 -16967532 + MLT1C LTR MaLR 1 351 -116 2347 110 0 3 chr10 123349233 123349533 -16967232 + AluSx SINE Alu 1 299 -13 2311 167 45 45 chr10 123349533 123349651 -16967114 + MLT1C LTR MaLR 350 467 0 211 226 88 98 chr10 123349651 123349674 -16967091 - L2 LINE L2 -258 3014 2992 1432 221 59 78 chr10 123350202 123350678 -16966087 + MLT1C LTR MaLR 1 467 0 2407 87 3 0 chr10 123350912 123351210 -16965555 - AluSx SINE Alu -13 299 1 606 252 13 6 chr10 123351904 123352063 -16964702 - MER103 DNA DNA 0 166 7 1148 261 19 16 chr10 123352064 123352375 -16964390 + MLT1J LTR MaLR 1 312 -199 280 280 9 9 chr10 123352416 123352523 -16964242 + MLT1J LTR MaLR 405 511 0 384 283 146 49 chr10 123352914 123353359 -16963406 + L2 LINE L2 2816 3303 -10 415 286 125 62 chr10 123353820 123354204 -16962561 - L1MC4a LINE L1 -1878 5930 5523 180 0 0 0 chr10 123354304 123354324 -16962441 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 2379 92 0 10 chr10 123354744 123355050 -16961715 - AluSq SINE Alu -10 303 1 385 285 61 24 chr10 123355124 123355289 -16961476 + MIR3 SINE MIR 19 189 -19 1937 140 84 0 chr10 123355453 123355739 -16961026 - AluSx SINE Alu -2 310 1 505 255 85 40 chr10 123357041 123357241 -16959524 + MIR SINE MIR 34 242 -20 2316 103 0 17 chr10 123357348 123357649 -16959116 + AluSx SINE Alu 1 296 -16 233 324 56 0 chr10 123358024 123358095 -16958670 - L2 LINE L2 -49 3264 3190 329 225 59 28 chr10 123358123 123358232 -16958533 - MIR SINE MIR -42 166 107 264 30 0 0 chr10 123360111 123360144 -16956621 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 207 114 0 0 chr10 123360226 123360261 -16956504 + (CA)n Simple_repeat Simple_repeat 1 35 0 586 197 52 134 chr10 123360671 123360940 -16955825 - L1MC4a LINE L1 -1933 5875 5629 1272 199 80 39 chr10 123361756 123362118 -16954647 - MSTB1 LTR MaLR -1 431 55 2185 121 3 7 chr10 123362160 123362458 -16954307 - AluSx SINE Alu -15 297 1 1976 131 3 39 chr10 123362533 123362838 -16953927 + AluSq SINE Alu 4 297 -16 330 322 40 20 chr10 123363013 123363215 -16953550 + L2 LINE L2 2662 2867 -447 523 305 82 51 chr10 123363244 123363598 -16953167 + MLT1K LTR MaLR 224 588 0 409 314 60 54 chr10 123364468 123364799 -16951966 + L2 LINE L2 2597 2929 -385 455 246 88 23 chr10 123364817 123364988 -16951777 - MIR SINE MIR -74 188 7 1316 174 56 0 chr10 123365148 123365418 -16951347 + L1MB3 LINE L1 5897 6181 -2 665 150 0 8 chr10 123365638 123365771 -16950994 - Charlie1 DNA MER1_type -6 2755 2624 668 266 18 74 chr10 123365774 123365909 -16950856 - Charlie1 DNA MER1_type -2539 222 104 2278 109 0 16 chr10 123365909 123366220 -16950545 - AluSx SINE Alu -5 307 2 668 266 18 74 chr10 123366220 123366313 -16950452 - Charlie1 DNA MER1_type -2657 104 7 1454 193 149 65 chr10 123367284 123367343 -16949422 - MLT2B1 LTR ERVL -3 517 464 2150 131 3 0 chr10 123367343 123367640 -16949125 + AluSx SINE Alu 3 300 -12 1454 193 149 65 chr10 123367640 123368057 -16948708 - MLT2B1 LTR ERVL -56 464 1 1827 118 75 73 chr10 123368546 123368918 -16947847 + THE1C LTR MaLR 1 373 -2 669 264 60 60 chr10 123369016 123369251 -16947514 - MIR SINE MIR -4 258 24 1734 202 45 65 chr10 123370200 123370711 -16946054 - MLT2B1 LTR ERVL 0 520 20 2430 107 0 0 chr10 123370720 123371029 -16945736 + AluSx SINE Alu 3 311 -1 286 293 105 83 chr10 123372330 123372559 -16944206 - L2 LINE L2 -1 3271 3038 333 228 152 14 chr10 123373039 123373184 -16943581 + MLT1H LTR MaLR 1 165 -384 246 255 43 21 chr10 123373382 123373476 -16943289 + MLT1H LTR MaLR 454 549 0 396 235 121 54 chr10 123373478 123373627 -16943138 - MIR SINE MIR -74 188 30 190 238 0 0 chr10 123374027 123374069 -16942696 - L2 LINE L2 -673 2641 2600 286 298 111 49 chr10 123375192 123375412 -16941353 + MIR SINE MIR 10 235 -27 444 265 33 60 chr10 123375441 123375592 -16941173 - L2 LINE L2 -11 3261 3115 406 260 147 33 chr10 123375605 123375818 -16940947 - MIR SINE MIR 0 262 17 2033 117 0 63 chr10 123375837 123376170 -16940595 - AluJb SINE Alu 0 312 1 1505 219 63 50 chr10 123376174 123376617 -16940148 + LTR2 LTR ERV1 1 449 0 1360 129 21 0 chr10 123376620 123376814 -16939951 - AluJb SINE Alu -114 198 1 219 56 28 0 chr10 123376817 123376853 -16939912 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2704 14 0 0 chr10 123376853 123377144 -16939621 - AluYb8 SINE Alu -27 291 1 275 296 43 43 chr10 123377327 123377442 -16939323 + MIR3 SINE MIR 71 185 -23 506 245 6 49 chr10 123377479 123377652 -16939113 + MIR SINE MIR 30 192 -63 198 333 0 0 chr10 123377910 123377967 -16938798 - MIR SINE MIR -2 260 204 310 287 96 13 chr10 123378069 123378226 -16938539 + MIR SINE MIR 16 185 -77 196 281 53 18 chr10 123378869 123378926 -16937839 - MER5A DNA MER1_type -85 104 46 229 272 107 10 chr10 123379525 123379628 -16937137 + MIR SINE MIR 80 192 -70 790 165 73 161 chr10 123380119 123380268 -16936497 + MER4C LTR ERV1 19 179 -286 2128 94 22 0 chr10 123380268 123380569 -16936196 - AluSx SINE Alu 0 307 1 790 165 73 161 chr10 123380569 123380908 -16935857 + MER4C LTR ERV1 179 465 0 408 292 162 7 chr10 123381811 123381965 -16934800 - MER5A DNA MER1_type -5 184 7 313 218 11 161 chr10 123382165 123382339 -16934426 + MLT1L LTR MaLR 2 149 -466 2368 98 48 28 chr10 123382874 123383231 -16933534 + THE1B LTR MaLR 1 364 0 1280 240 145 11 chr10 123383590 123384031 -16932734 - MLT1J LTR MaLR -11 500 1 2319 105 3 6 chr10 123384101 123384414 -16932351 - AluSq SINE Alu -1 312 1 25 0 0 0 chr10 123384423 123384448 -16932317 + AT_rich Low_complexity Low_complexity 1 25 0 395 189 9 85 chr10 123384919 123385025 -16931740 + MIR SINE MIR 59 156 -106 2212 112 3 0 chr10 123385077 123385362 -16931403 + AluSq SINE Alu 1 286 -27 291 85 0 0 chr10 123385362 123385409 -16931356 + (CAAT)n Simple_repeat Simple_repeat 2 48 0 2137 120 0 0 chr10 123386010 123386332 -16930433 + AluSq SINE Alu 1 322 0 754 321 46 4 chr10 123386405 123386642 -16930123 + MIR SINE MIR 16 262 0 884 263 14 104 chr10 123386661 123387095 -16929670 + MLT1J LTR MaLR 25 419 -92 405 202 138 18 chr10 123387468 123387577 -16929188 - MIR3 SINE MIR -46 162 41 230 54 0 27 chr10 123388268 123388305 -16928460 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 208 250 270 20 chr10 123388309 123388409 -16928356 - L2 LINE L2 -3 3310 3186 275 311 126 0 chr10 123388975 123389110 -16927655 + MIR SINE MIR 34 185 -77 559 287 47 96 chr10 123389620 123390087 -16926678 + MLT1K LTR MaLR 141 584 -4 1246 154 74 64 chr10 123390562 123390817 -16925948 + L1MB7 LINE L1 5852 6114 -70 2163 125 0 0 chr10 123390817 123391150 -16925615 - AluSx SINE Alu 0 333 1 1246 154 74 64 chr10 123391150 123391203 -16925562 + L1MB7 LINE L1 6114 6165 -19 1960 198 35 47 chr10 123391372 123391883 -16924882 + MLT1D LTR MaLR 1 505 0 473 299 27 43 chr10 123391942 123392129 -16924636 + MIR3 SINE MIR 10 193 -15 1823 145 118 48 chr10 123392342 123392383 -16924382 - MSTA LTR MaLR 0 428 391 2144 133 7 0 chr10 123392383 123392692 -16924073 + AluSx SINE Alu 1 311 -1 1823 145 118 48 chr10 123392692 123393050 -16923715 - MSTA LTR MaLR -37 391 1 308 307 0 0 chr10 123393132 123393220 -16923545 - MER117 DNA MER1_type -106 91 4 1905 134 0 34 chr10 123395357 123395671 -16921094 + AluSx SINE Alu 1 304 0 1754 174 0 43 chr10 123395771 123396093 -16920672 + AluJo SINE Alu 2 309 -3 1248 116 77 24 chr10 123396554 123396761 -16920004 + MER20 DNA MER1_type 2 219 0 265 304 125 65 chr10 123397037 123397221 -16919544 + L2 LINE L2 3021 3215 -57 1509 242 28 84 chr10 123397223 123397721 -16919044 - MLT1H1 LTR MaLR 0 555 115 1925 128 7 43 chr10 123397721 123398025 -16918740 + AluJb SINE Alu 1 293 -19 1509 242 28 84 chr10 123398025 123398073 -16918692 - MLT1H1 LTR MaLR -440 115 66 558 206 47 53 chr10 123398367 123398537 -16918228 - MER117 DNA MER1_type -28 169 1 248 0 31 0 chr10 123398617 123398649 -16918116 + (GA)n Simple_repeat Simple_repeat 2 34 0 2358 85 0 0 chr10 123398784 123399089 -16917676 + AluY SINE Alu 1 305 0 2355 89 7 3 chr10 123399328 123399630 -16917135 - AluSg SINE Alu -7 303 1 319 247 150 0 chr10 123399899 123400010 -16916755 + MIR SINE MIR 30 154 -63 653 207 15 30 chr10 123400352 123400487 -16916278 - MIR SINE MIR -86 176 44 1882 158 14 0 chr10 123400766 123401050 -16915715 - AluJb SINE Alu -24 288 1 927 231 24 69 chr10 123401427 123401588 -16915177 - MIR SINE MIR 0 262 114 1913 126 14 3 chr10 123401588 123401874 -16914891 - AluSx SINE Alu -12 300 12 927 231 24 69 chr10 123401874 123401959 -16914806 - MIR SINE MIR -148 114 27 865 253 74 25 chr10 123402080 123402404 -16914361 + LTR16A LTR ERVL 97 436 -14 1630 188 39 20 chr10 123402582 123402939 -16913826 + L1MB8 LINE L1 5809 6172 -6 399 89 0 0 chr10 123403279 123403335 -16913430 + (TG)n Simple_repeat Simple_repeat 2 57 0 208 313 36 12 chr10 123403836 123403919 -16912846 - MIR3 SINE MIR -6 202 118 444 237 244 13 chr10 123404663 123404819 -16911946 + MIR SINE MIR 1 192 -70 264 197 49 0 chr10 123404970 123405031 -16911734 - HAL1 LINE L1 0 2507 2444 1848 159 3 53 chr10 123405686 123405833 -16910932 + AluJo SINE Alu 3 127 -185 4385 51 0 0 chr10 123405833 123406360 -16910405 + L1PA7 LINE L1 5624 6150 -4 1848 159 3 53 chr10 123406360 123406533 -16910232 + AluJo SINE Alu 127 307 -5 438 238 72 80 chr10 123406573 123406789 -16909976 + MIR SINE MIR 21 230 -32 1241 117 0 0 chr10 123407083 123407246 -16909519 + AluSg/x SINE Alu 134 296 -16 2504 74 0 3 chr10 123408117 123408427 -16908338 + AluY SINE Alu 1 309 -2 345 307 134 17 chr10 123408554 123408733 -16908032 - L1MC4a LINE L1 -1904 5904 5705 2375 107 13 0 chr10 123409304 123409612 -16907153 - AluSx SINE Alu 0 312 1 5273 75 1 12 chr10 123409753 123410420 -16906345 - PABL_A LTR ERV1 0 660 1 375 266 30 69 chr10 123410739 123410857 -16905908 + MLT1K LTR MaLR 387 495 -93 2076 125 48 0 chr10 123410857 123411146 -16905619 - AluSx SINE Alu -9 303 1 375 266 30 69 chr10 123411146 123411230 -16905535 + MLT1K LTR MaLR 495 581 -7 249 274 0 0 chr10 123411609 123411671 -16905094 - MLT1K LTR MaLR -339 249 188 2383 66 3 16 chr10 123412030 123412334 -16904431 + AluY SINE Alu 1 300 -11 508 265 29 88 chr10 123412906 123413178 -16903587 + L2 LINE L2 3058 3313 0 404 365 8 8 chr10 123413278 123413429 -16903336 - MIR SINE MIR -62 146 33 251 213 16 0 chr10 123413709 123413770 -16902995 - MLT1K LTR MaLR -6 582 521 316 169 0 15 chr10 123413956 123414021 -16902744 - MLT1K LTR MaLR -324 264 201 2027 93 14 18 chr10 123414920 123415200 -16901565 + AluSx SINE Alu 21 299 -13 559 309 24 39 chr10 123416591 123416798 -16899967 + MIR SINE MIR 49 252 -10 2152 117 17 0 chr10 123416881 123417179 -16899586 - AluSx SINE Alu -6 306 4 2114 135 56 0 chr10 123417911 123418251 -16898514 - MER46B DNA MER2_type -1 235 2 292 273 34 0 chr10 123419663 123419751 -16897014 + MIR SINE MIR 60 150 -112 2264 125 0 0 chr10 123419752 123420057 -16896708 + AluSx SINE Alu 1 305 -7 358 254 18 0 chr10 123420093 123420203 -16896562 + L1MC5 LINE L1 7672 7783 -178 679 205 92 27 chr10 123420223 123420408 -16896357 + L1ME2 LINE L1 5914 6110 -54 2449 155 80 2 chr10 123420437 123420876 -16895889 + MER31A LTR ERV1 1 473 -12 1410 180 128 0 chr10 123420877 123421158 -16895607 - AluJb SINE Alu 0 314 2 614 127 12 84 chr10 123421185 123421351 -16895414 + L1MC4 LINE L1 7889 8042 0 282 137 0 82 chr10 123421358 123421431 -16895334 + L1ME1 LINE L1 6096 6162 -4 2429 109 3 0 chr10 123421554 123421865 -16894900 - AluSp SINE Alu -1 312 1 24 0 0 0 chr10 123421888 123421912 -16894853 + AT_rich Low_complexity Low_complexity 1 24 0 471 306 38 16 chr10 123422452 123422635 -16894130 + MIR3 SINE MIR 11 197 -11 362 281 34 45 chr10 123422766 123422858 -16893907 - Charlie8 DNA MER1_type -165 176 85 2211 94 3 0 chr10 123422858 123423146 -16893619 - AluSc SINE Alu -4 305 17 362 281 34 45 chr10 123423146 123423231 -16893534 - Charlie8 DNA MER1_type -256 85 1 598 178 73 101 chr10 123423359 123423578 -16893187 + MER112 DNA MER1_type 2 214 -46 368 209 27 36 chr10 123423583 123423693 -16893072 - MIR SINE MIR -30 232 124 651 87 0 0 chr10 123424459 123424563 -16892202 + (CACAG)n Simple_repeat Simple_repeat 4 107 0 21 0 0 0 chr10 123425248 123425269 -16891496 + AT_rich Low_complexity Low_complexity 1 21 0 238 329 146 6 chr10 123425664 123425822 -16890943 - L2 LINE L2 0 3313 3134 195 69 0 0 chr10 123426509 123426538 -16890227 + (TG)n Simple_repeat Simple_repeat 2 30 0 383 270 66 111 chr10 123426594 123426972 -16889793 + L2 LINE L2 2948 3308 -5 1277 234 108 10 chr10 123428020 123428438 -16888327 - MLT1C LTR MaLR -3 464 6 229 165 68 146 chr10 123428740 123428767 -16887998 - MIR SINE MIR -27 235 207 2210 129 0 0 chr10 123428767 123429070 -16887695 - AluSx SINE Alu -9 303 1 229 165 68 146 chr10 123429070 123429145 -16887620 - MIR SINE MIR -55 207 141 2364 71 0 0 chr10 123430069 123430405 -16886360 - AluY SINE Alu 0 336 1 2280 138 0 0 chr10 123430408 123430720 -16886045 - AluSx SINE Alu 0 312 1 2114 146 7 3 chr10 123430935 123431244 -16885521 - AluSx SINE Alu -2 310 1 249 277 58 65 chr10 123431623 123431778 -16884987 - MER103 DNA DNA -5 161 8 2311 102 3 0 chr10 123431789 123432083 -16884682 + AluSp SINE Alu 1 295 -18 2425 78 0 7 chr10 123432376 123432671 -16884094 - AluY SINE Alu -18 293 1 2303 118 0 0 chr10 123432714 123433019 -16883746 + AluSx SINE Alu 1 305 -7 596 213 7 21 chr10 123434030 123434171 -16882594 - AluSg/x SINE Alu -1 311 173 262 360 53 18 chr10 123434246 123434360 -16882405 - L2 LINE L2 -54 3218 3101 3574 185 31 16 chr10 123434443 123434458 -16882307 + L1MB7 LINE L1 4754 4767 -1417 2247 127 0 3 chr10 123434458 123434757 -16882008 + AluSx SINE Alu 1 298 -14 3574 185 31 16 chr10 123434757 123435156 -16881609 + L1MB7 LINE L1 4767 5159 -1025 1987 147 3 3 chr10 123435156 123435465 -16881300 + AluJb SINE Alu 1 309 0 3574 185 31 16 chr10 123435465 123436412 -16880353 + L1MB7 LINE L1 5159 6174 -10 1783 142 0 82 chr10 123436432 123436762 -16880003 - AluSx SINE Alu -9 303 1 574 237 43 7 chr10 123437219 123437358 -16879407 + MIR SINE MIR 4 147 -115 2317 104 3 0 chr10 123437624 123437921 -16878844 + AluSp SINE Alu 1 298 -15 2630 215 35 58 chr10 123438245 123438269 -16878496 + Zaphod DNA AcHobo 60 83 -3948 1788 141 199 14 chr10 123438269 123438630 -16878135 + MSTA LTR MaLR 1 428 0 2630 215 35 58 chr10 123438630 123439391 -16877374 + Zaphod DNA AcHobo 83 860 -3171 2307 107 0 10 chr10 123439391 123439700 -16877065 - AluSx SINE Alu -6 306 1 2213 108 21 0 chr10 123439701 123439988 -16876777 - AluSc SINE Alu -16 293 1 2630 215 35 58 chr10 123439988 123440152 -16876613 + Zaphod DNA AcHobo 859 990 -3041 842 221 121 18 chr10 123440143 123440473 -16876292 + Zaphod DNA AcHobo 3590 3953 -78 * 1384 177 70 11 chr10 123440484 123440657 -16876108 - AluJo SINE Alu -2 310 114 180 0 0 0 chr10 123440657 123440677 -16876088 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1384 177 70 11 chr10 123440677 123440774 -16875991 - AluJo SINE Alu -198 114 24 279 132 294 0 chr10 123440789 123440857 -16875908 + Zaphod DNA AcHobo 3944 4031 0 434 205 134 0 chr10 123440903 123441015 -16875750 - MIR SINE MIR 0 262 136 5164 99 36 36 chr10 123441019 123441873 -16874892 - L1PA15 LINE L1 0 6165 5312 387 306 9 0 chr10 123441873 123441981 -16874784 - MIR SINE MIR -114 148 40 306 312 0 0 chr10 123442315 123442392 -16874373 + CT-rich Low_complexity Low_complexity 2 78 0 543 300 119 46 chr10 123442392 123442802 -16873963 - L2 LINE L2 -1 3312 2873 367 167 14 174 chr10 123442853 123442991 -16873774 + MER58B DNA MER1_type 217 332 -9 1861 152 0 55 chr10 123442991 123443321 -16873444 + AluJb SINE Alu 1 312 0 21 0 0 0 chr10 123443325 123443346 -16873419 + AT_rich Low_complexity Low_complexity 1 21 0 227 272 16 120 chr10 123443360 123443485 -16873280 - L2 LINE L2 -494 2820 2709 669 284 80 38 chr10 123443848 123444137 -16872628 - MLT1K LTR MaLR -164 424 124 1082 101 63 6 chr10 123444201 123444360 -16872405 + AluSq SINE Alu 1 168 -145 642 241 226 60 chr10 123444360 123444762 -16872003 - LTR33A LTR ERVL -28 495 27 22 0 0 0 chr10 123445023 123445045 -16871720 + AT_rich Low_complexity Low_complexity 1 22 0 484 257 9 0 chr10 123445859 123445964 -16870801 + MER5A DNA MER1_type 4 109 -80 189 248 171 57 chr10 123445891 123445966 -16870799 - MER5A DNA MER1_type -24 165 73 * 6075 106 16 2 chr10 123445966 123447051 -16869714 + L1PA14 LINE L1 5070 6160 -1 189 248 171 57 chr10 123447051 123447080 -16869685 - MER5A DNA MER1_type -116 73 49 330 338 90 8 chr10 123447352 123447485 -16869280 - MIR SINE MIR 0 262 119 664 316 35 24 chr10 123447504 123447877 -16868888 + L1ME3A LINE L1 5569 5945 -225 225 0 0 0 chr10 123447917 123447942 -16868823 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2239 133 0 0 chr10 123448137 123448437 -16868328 + AluSx SINE Alu 1 300 -12 280 288 136 8 chr10 123448440 123448558 -16868207 - MIR SINE MIR -128 134 2 230 278 0 0 chr10 123449086 123449140 -16867625 - MIR SINE MIR -123 139 86 457 250 52 0 chr10 123449142 123449258 -16867507 + MIR3 SINE MIR 81 202 -6 215 355 20 26 chr10 123450241 123450393 -16866372 - MIR3 SINE MIR -50 158 8 706 201 40 180 chr10 123450465 123450549 -16866216 - MIR SINE MIR -10 252 158 739 180 135 45 chr10 123450549 123450749 -16866016 + MER20 DNA MER1_type 2 219 0 706 201 40 180 chr10 123450749 123450942 -16865823 - MIR SINE MIR -104 158 14 479 227 73 31 chr10 123451148 123451364 -16865401 - L1MC4a LINE L1 -254 5924 5698 377 284 244 6 chr10 123451365 123451541 -16865224 + MIR SINE MIR 31 248 -14 233 203 0 34 chr10 123451551 123451610 -16865155 + (TTA)n Simple_repeat Simple_repeat 1 57 0 406 134 0 0 chr10 123452737 123452804 -16863961 + MLT1K LTR MaLR 522 588 0 438 20 0 0 chr10 123453752 123453803 -16862962 + (TG)n Simple_repeat Simple_repeat 1 51 0 2205 165 23 77 chr10 123455339 123455817 -16860948 - LTR32 LTR ERVL 0 471 20 255 283 9 28 chr10 123456071 123456177 -16860588 + MIR SINE MIR 48 151 -57 603 285 24 6 chr10 123456213 123456378 -16860387 + MER5B DNA MER1_type 7 174 -4 571 309 148 24 chr10 123456625 123456923 -16859842 - L2 LINE L2 0 3272 2938 2400 85 3 0 chr10 123456943 123457236 -16859529 - AluSq SINE Alu -19 294 1 193 272 204 61 chr10 123457337 123457484 -16859281 + L2 LINE L2 3104 3271 -1 210 226 198 75 chr10 123457811 123457917 -16858848 + L2 LINE L2 3185 3303 -10 419 267 97 24 chr10 123458619 123458796 -16857969 + MIR SINE MIR 38 226 -36 1047 196 29 5 chr10 123458930 123459139 -16857626 - MER20 DNA MER1_type -5 214 1 430 286 63 23 chr10 123459177 123459352 -16857413 + MIR3 SINE MIR 2 183 -25 2321 84 0 0 chr10 123459595 123459879 -16856886 - AluSx SINE Alu -10 302 19 636 233 67 19 chr10 123459879 123460068 -16856697 - MIR SINE MIR -16 246 45 262 241 111 37 chr10 123460206 123460314 -16856451 + MIR SINE MIR 21 136 -72 394 248 198 39 chr10 123460325 123460583 -16856182 - L2 LINE L2 -43 3270 2972 309 293 50 39 chr10 123460845 123461026 -16855739 - MLT1I LTR MaLR -223 186 4 383 314 115 16 chr10 123461834 123462025 -16854740 + MIR SINE MIR 1 210 -52 210 71 0 0 chr10 123462559 123462587 -16854178 + (A)n Simple_repeat Simple_repeat 1 28 0 499 279 143 36 chr10 123462674 123462925 -16853840 - L2 LINE L2 -5 3267 2990 * 776 238 81 0 chr10 123462922 123463132 -16853633 + MIR SINE MIR 34 260 -2 298 296 72 16 chr10 123463140 123463265 -16853500 + MIR SINE MIR 129 260 -2 212 95 71 0 chr10 123463850 123463892 -16852873 + T-rich Low_complexity Low_complexity 4 48 0 207 100 0 0 chr10 123465203 123465233 -16851532 + (CA)n Simple_repeat Simple_repeat 1 30 0 659 269 31 0 chr10 123465372 123465532 -16851233 + MIR SINE MIR 20 184 -78 246 279 38 85 chr10 123466395 123466525 -16850240 - MIR3 SINE MIR -49 159 34 287 387 67 0 chr10 123466657 123466851 -16849914 - L2 LINE L2 -215 3057 2851 235 333 143 0 chr10 123467888 123467993 -16848772 + MIR3 SINE MIR 14 133 -75 2419 115 21 44 chr10 123468060 123468444 -16848321 + THE1C LTR MaLR 1 375 0 234 247 206 41 chr10 123469213 123469310 -16847455 + L2 LINE L2 3160 3272 0 486 308 154 9 chr10 123470516 123470730 -16846035 + MIR SINE MIR 6 250 -12 326 355 30 6 chr10 123471566 123471735 -16845030 + MIR SINE MIR 58 230 -32 356 343 47 29 chr10 123471789 123472171 -16844594 + L2 LINE L2 2259 2647 -667 620 272 95 0 chr10 123472279 123472448 -16844317 - MIR SINE MIR -50 212 28 435 324 176 16 chr10 123472611 123472855 -16843910 + L2 LINE L2 2904 3186 -86 2150 153 55 12 chr10 123472891 123473082 -16843683 + MSTB LTR MaLR 1 182 -244 225 0 0 0 chr10 123473082 123473107 -16843658 + (TC)n Simple_repeat Simple_repeat 2 26 0 2150 153 55 12 chr10 123473107 123473314 -16843451 + MSTB LTR MaLR 182 416 -10 734 195 47 58 chr10 123473392 123473582 -16843183 + MIR SINE MIR 21 208 -54 512 270 40 71 chr10 123473694 123473946 -16842819 + L2 LINE L2 2888 3131 -182 253 360 81 0 chr10 123474245 123474381 -16842384 + L3b LINE CR1 1113 1259 -324 1117 209 5 5 chr10 123474698 123474913 -16841852 + MER58A DNA MER1_type 1 215 -9 367 331 14 14 chr10 123475641 123475780 -16840985 - MIR3 SINE MIR -48 160 22 289 70 0 0 chr10 123476502 123476545 -16840220 - MER58 DNA MER1_type -13 2407 2365 503 214 0 10 chr10 123476562 123476665 -16840100 - MER58 DNA MER1_type -113 102 1 2406 67 13 25 chr10 123477220 123477534 -16839231 + AluSg SINE Alu 1 310 0 452 229 88 93 chr10 123477561 123477766 -16838999 + MER102b DNA MER1_type 137 340 -1 21 0 0 0 chr10 123478238 123478259 -16838506 + AT_rich Low_complexity Low_complexity 1 21 0 1962 177 0 0 chr10 123478259 123478564 -16838201 + AluSx SINE Alu 1 305 -7 1903 247 67 2 chr10 123479045 123479577 -16837188 + L1ME1 LINE L1 5601 6166 0 2944 199 64 25 chr10 123479919 123480603 -16836162 + L1ME2 LINE L1 5444 6154 -10 1902 166 3 3 chr10 123480854 123481161 -16835604 - AluJb SINE Alu -5 307 1 329 256 50 8 chr10 123481276 123481397 -16835368 + L1MC4 LINE L1 7916 8041 -1 1250 235 88 80 chr10 123481502 123482242 -16834523 + HAL1b LINE L1 7 752 -596 848 230 84 44 chr10 123482272 123482568 -16834197 + HAL1b LINE L1 843 1150 -198 264 59 0 0 chr10 123482604 123482638 -16834127 + (ATTG)n Simple_repeat Simple_repeat 3 36 0 483 87 0 0 chr10 123482679 123482748 -16834017 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 32 26 0 0 chr10 123482920 123482959 -16833806 + AT_rich Low_complexity Low_complexity 1 39 0 242 259 0 0 chr10 123483584 123483642 -16833123 + L2 LINE L2 2996 3053 -219 207 0 0 0 chr10 123484523 123484546 -16832219 + (TC)n Simple_repeat Simple_repeat 2 24 0 952 221 108 101 chr10 123484553 123484979 -16831786 + MLT1H LTR MaLR 115 543 -6 548 211 90 26 chr10 123485001 123485157 -16831608 + MIR3 SINE MIR 37 202 -6 180 0 0 0 chr10 123485232 123485252 -16831513 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 123485983 123486010 -16830755 + (T)n Simple_repeat Simple_repeat 1 27 0 215 296 156 30 chr10 123486810 123486945 -16829820 - L2 LINE L2 -4 3309 3158 2861 246 68 18 chr10 123488394 123489229 -16827536 + L1MEc LINE L1 34 910 -5486 386 314 9 49 chr10 123490362 123490585 -16826180 - L1MC/D LINE L1 -2032 5776 5563 180 0 0 0 chr10 123491035 123491055 -16825710 + (T)n Simple_repeat Simple_repeat 1 20 0 328 324 88 15 chr10 123491236 123491372 -16825393 + MIR3 SINE MIR 3 148 -60 612 292 58 22 chr10 123493383 123493486 -16823279 + L1ME LINE L1 5515 5613 -508 2284 115 0 6 chr10 123493486 123493800 -16822965 - AluSx SINE Alu 0 312 1 612 292 58 22 chr10 123493800 123493973 -16822792 + L1ME LINE L1 5613 5801 -320 518 277 5 27 chr10 123493998 123494182 -16822583 + L1MD3 LINE L1 25 204 -6219 2866 255 68 36 chr10 123494221 123495785 -16820980 + L1MD3 LINE L1 1990 3555 -3386 810 206 35 12 chr10 123495786 123495956 -16820809 + AluJo SINE Alu 120 293 -19 2234 229 33 12 chr10 123496003 123496675 -16820090 + L1MD3 LINE L1 3564 4249 -2692 1339 205 22 29 chr10 123496676 123496977 -16819788 - AluJo SINE Alu 0 310 12 7223 220 90 32 chr10 123496978 123497452 -16819313 + L1MD3 LINE L1 4246 4691 -4099 1997 152 7 3 chr10 123497452 123497761 -16819004 + AluJb SINE Alu 1 310 -2 7223 220 90 32 chr10 123497761 123498186 -16818579 + L1MD3 LINE L1 4691 5090 -3700 2006 110 36 0 chr10 123498186 123498467 -16818298 + AluSx SINE Alu 1 291 -21 7223 220 90 32 chr10 123498467 123501734 -16815031 + L1MD3 LINE L1 5090 8678 -112 304 238 0 24 chr10 123501884 123501968 -16814797 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 2218 114 3 16 chr10 123502153 123502460 -16814305 - AluSx SINE Alu -9 303 1 338 237 115 41 chr10 123503975 123504252 -16812513 - L2 LINE L2 -22 3291 2925 967 270 141 16 chr10 123504313 123504683 -16812082 + LTR16C LTR ERVL 76 491 0 414 261 45 0 chr10 123504988 123505099 -16811666 + L2 LINE L2 3198 3313 0 230 359 28 0 chr10 123505097 123505203 -16811562 - MIR SINE MIR -66 142 34 * 250 249 40 49 chr10 123505339 123505455 -16811310 + MIR SINE MIR 3 118 -90 354 320 0 15 chr10 123507588 123507747 -16809018 + MIR SINE MIR 44 197 -61 2240 117 3 0 chr10 123507997 123508305 -16808460 - AluSx SINE Alu -3 309 1 406 253 72 30 chr10 123508633 123508799 -16807966 + L1ME4a LINE L1 5599 5771 -350 444 222 53 63 chr10 123508852 123509057 -16807708 + MER113 DNA MER1_type? 79 281 -240 1887 165 78 24 chr10 123509057 123509588 -16807177 + MLT2A2 LTR ERVL 1 554 0 216 191 43 0 chr10 123509599 123509646 -16807119 + GA-rich Low_complexity Low_complexity 4 52 0 383 229 36 50 chr10 123509676 123509816 -16806949 + MER113 DNA MER1_type? 307 444 -77 429 303 96 0 chr10 123510047 123510225 -16806540 + L1MC5 LINE L1 7713 7907 -54 2078 136 0 0 chr10 123510683 123510969 -16805796 - AluSx SINE Alu -26 286 1 252 309 48 24 chr10 123511533 123511659 -16805106 + MIR SINE MIR 21 149 -113 2152 103 13 20 chr10 123512036 123512338 -16804427 + AluSq SINE Alu 1 300 -13 268 211 28 14 chr10 123512361 123512432 -16804333 + (TATATG)n Simple_repeat Simple_repeat 5 76 0 256 229 47 109 chr10 123512432 123512624 -16804141 + L1ME4a LINE L1 5924 6103 -18 336 312 52 29 chr10 123513238 123513411 -16803354 - MIR3 SINE MIR -5 203 27 732 224 143 5 chr10 123513454 123513664 -16803101 + MIR SINE MIR 3 241 -21 1802 155 49 30 chr10 123513673 123514040 -16802725 + THE1C LTR MaLR 1 374 -1 723 297 76 12 chr10 123514248 123514656 -16802109 + L1ME3A LINE L1 4801 5234 -912 2141 246 105 43 chr10 123514784 123515629 -16801136 + L1ME3A LINE L1 5261 6158 -12 348 245 106 20 chr10 123516093 123516244 -16800521 + MIR SINE MIR 27 190 -72 180 268 0 0 chr10 123516659 123516700 -16800065 + MER5B DNA MER1_type 1 41 -137 295 221 0 35 chr10 123516720 123516806 -16799959 - MER5B DNA MER1_type -95 83 1 214 298 0 0 chr10 123517494 123517541 -16799224 + G-rich Low_complexity Low_complexity 4 50 0 238 323 0 0 chr10 123518071 123518136 -16798629 + (TG)n Simple_repeat Simple_repeat 1 65 0 362 302 39 22 chr10 123518366 123518548 -16798217 + MIR SINE MIR 13 197 -65 390 21 0 0 chr10 123519235 123519282 -16797483 + (CA)n Simple_repeat Simple_repeat 2 48 0 1521 198 87 44 chr10 123520085 123520374 -16796391 - MLT1C LTR MaLR -8 459 143 4285 90 4 2 chr10 123520374 123520927 -16795838 - MER41A LTR ERV1 0 554 1 1521 198 87 44 chr10 123520927 123521072 -16795693 - MLT1C LTR MaLR -324 143 6 212 208 21 0 chr10 123521652 123521700 -16795065 - MIR SINE MIR -111 151 103 1335 103 15 0 chr10 123522401 123522596 -16794169 - L1PB1 LINE L1 -3 6148 5951 191 311 14 0 chr10 123523634 123523708 -16793057 - MIR SINE MIR -108 154 80 499 275 35 0 chr10 123523833 123523975 -16792790 - MIR SINE MIR -111 151 5 1860 51 0 9 chr10 123524000 123524214 -16792551 + AluY SINE Alu 76 287 -24 903 208 10 26 chr10 123524225 123524417 -16792348 - MER58A DNA MER1_type -34 190 2 1170 241 4 111 chr10 123524513 123525040 -16791725 + L2 LINE L2 2826 3295 -18 2204 108 0 3 chr10 123525040 123525326 -16791439 + AluSx SINE Alu 12 296 -16 1170 241 4 111 chr10 123525326 123525338 -16791427 + L2 LINE L2 3295 3307 -6 461 231 108 8 chr10 123526268 123526398 -16790367 - MIR SINE MIR -115 147 5 304 136 203 0 chr10 123526746 123526805 -16789960 + L1MB3 LINE L1 5577 5647 -687 186 43 0 0 chr10 123526810 123526833 -16789932 + (TAGG)n Simple_repeat Simple_repeat 2 24 0 773 73 40 23 chr10 123526833 123527010 -16789755 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2418 192 29 6 chr10 123527015 123527526 -16789239 + L1MB3 LINE L1 5661 6183 0 236 246 0 0 chr10 123527823 123527884 -16788881 - L2 LINE L2 -1 3271 3211 267 91 0 0 chr10 123528121 123528154 -16788611 + Alu SINE Alu 255 287 -15 25 31 0 0 chr10 123528154 123528186 -16788579 + AT_rich Low_complexity Low_complexity 1 32 0 227 300 100 0 chr10 123528506 123528626 -16788139 + MIR3 SINE MIR 61 192 -16 235 222 0 19 chr10 123529963 123530017 -16786748 - L2 LINE L2 0 3272 3220 1817 104 12 0 chr10 123530108 123530409 -16786356 - AluSx SINE Alu 0 332 29 317 256 100 0 chr10 123530458 123530579 -16786186 - MIR3 SINE MIR -51 157 40 31 0 0 0 chr10 123530794 123530825 -16785940 + AT_rich Low_complexity Low_complexity 1 31 0 1964 98 39 14 chr10 123530825 123531110 -16785655 - AluSx SINE Alu -20 292 1 239 222 200 22 chr10 123531191 123531281 -16785484 - MIR SINE MIR -60 148 43 445 247 27 34 chr10 123532218 123532364 -16784401 + MLT1K LTR MaLR 370 514 -74 1962 111 0 7 chr10 123532752 123533031 -16783734 + AluSc SINE Alu 1 277 -32 496 128 10 10 chr10 123533031 123533133 -16783632 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 816 284 109 21 chr10 123533541 123533918 -16782847 - MLT1K LTR MaLR -4 584 175 285 370 43 11 chr10 123535160 123535344 -16781421 - MIR SINE MIR -12 250 61 373 245 1 36 chr10 123537237 123537389 -16779376 + L1ME1 LINE L1 5703 5850 -328 1690 139 7 28 chr10 123537410 123537698 -16779067 - AluJo SINE Alu -30 282 1 297 243 29 48 chr10 123539515 123539618 -16777147 - MIR3 SINE MIR -43 165 65 414 300 88 58 chr10 123540691 123541088 -16775677 + L1ME4a LINE L1 5707 6115 -6 1777 173 3 3 chr10 123541213 123541519 -16775246 + AluJb SINE Alu 1 306 -6 335 319 69 98 chr10 123541730 123542047 -16774718 - L2 LINE L2 -1 3271 2964 399 286 121 29 chr10 123542547 123542753 -16774012 - MIR SINE MIR 0 262 38 315 206 52 66 chr10 123542952 123543088 -16773677 - MER112 DNA MER1_type -52 208 75 218 369 12 0 chr10 123543142 123543226 -16773539 + MER91A DNA MER1_type 74 158 -38 * 225 323 108 0 chr10 123543212 123543305 -16773460 + MER91A DNA MER1_type 88 190 -6 234 270 100 0 chr10 123543357 123543457 -16773308 + LTR33 LTR ERVL 33 142 -379 836 243 35 4 chr10 123543552 123543778 -16772987 + LTR33 LTR ERVL 282 514 -7 470 352 82 13 chr10 123544838 123545071 -16771694 + MIR SINE MIR 9 257 -5 521 322 10 39 chr10 123545074 123545282 -16771483 + MIR SINE MIR 15 216 -46 3660 189 72 42 chr10 123545356 123546331 -16770434 - L1MC4 LINE L1 0 8042 7039 1528 166 7 37 chr10 123546373 123546669 -16770096 + AluJo SINE Alu 18 304 -8 429 279 101 0 chr10 123546732 123546861 -16769904 - MIR SINE MIR 0 262 121 882 156 30 40 chr10 123546897 123547126 -16769639 - L1P2 LINE L1 -441 5713 5486 199 176 29 0 chr10 123548013 123548047 -16768718 - MIR SINE MIR -70 192 158 2124 162 40 37 chr10 123548047 123548597 -16768168 + MLT2A2 LTR ERVL 1 554 0 378 248 81 86 chr10 123549531 123549765 -16767000 + L1MC4a LINE L1 5732 5964 -1844 588 328 104 43 chr10 123551132 123551638 -16765127 - L2 LINE L2 -19 3294 2720 2184 129 0 0 chr10 123551638 123551949 -16764816 - AluSq SINE Alu -2 311 1 588 328 104 43 chr10 123551949 123552232 -16764533 - L2 LINE L2 -593 2720 2455 241 254 0 0 chr10 123552340 123552395 -16764370 + (ATTG)n Simple_repeat Simple_repeat 3 57 0 224 273 9 0 chr10 123552395 123552505 -16764260 + (TGGA)n Simple_repeat Simple_repeat 1 111 0 343 261 113 42 chr10 123552787 123552929 -16763836 + MIR SINE MIR 56 207 -55 224 292 15 0 chr10 123553280 123553345 -16763420 + L2 LINE L2 3207 3272 0 344 195 81 23 chr10 123553383 123553470 -16763295 - MLT1H LTR MaLR 0 549 458 384 269 86 42 chr10 123553543 123553797 -16762968 - MLT1H LTR MaLR -229 320 21 3202 88 23 0 chr10 123554073 123554507 -16762258 + L1PA10 LINE L1 5710 6153 -15 263 276 122 86 chr10 123554600 123554821 -16761944 - MLT1I LTR MaLR -109 300 72 1790 137 7 17 chr10 123555573 123555866 -16760899 + AluJo SINE Alu 17 306 -6 207 321 75 19 chr10 123555873 123555979 -16760786 - L2 LINE L2 -20 3252 3141 548 158 0 0 chr10 123556167 123556249 -16760516 + AluJ/FLAM SINE Alu 4 85 -227 2111 125 0 0 chr10 123556335 123556640 -16760125 + AluSx SINE Alu 1 305 -7 964 328 131 21 chr10 123556911 123557657 -16759108 - L3 LINE CR1 -3 1574 747 330 238 0 57 chr10 123557787 123557909 -16758856 + L1MA5A LINE L1 5311 5425 -2383 2659 217 59 34 chr10 123558182 123558441 -16758324 + L1ME LINE L1 4495 4746 -1418 473 0 18 0 chr10 123558441 123558498 -16758267 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2659 217 59 34 chr10 123558498 123559140 -16757625 + L1ME LINE L1 4746 5430 -734 1807 172 13 0 chr10 123559140 123559448 -16757317 + AluJb SINE Alu 1 312 0 2659 217 59 34 chr10 123559448 123559504 -16757261 + L1ME LINE L1 5430 5483 -681 338 268 47 62 chr10 123559799 123559977 -16756788 + MIR SINE MIR 10 185 -67 1843 161 3 0 chr10 123560036 123560341 -16756424 - AluJb SINE Alu -6 306 1 362 194 206 114 chr10 123560460 123560635 -16756130 + LTR33A LTR ERVL 27 217 -306 2631 179 14 33 chr10 123560766 123561341 -16755424 - L1P LINE L1 -3570 2576 2013 760 206 27 22 chr10 123561339 123561523 -16755242 + L1 LINE L1 4468 4652 -1494 * 876 142 0 0 chr10 123562272 123562399 -16754366 + FLAM_C SINE Alu 1 127 -16 28 0 0 0 chr10 123562405 123562433 -16754332 + AT_rich Low_complexity Low_complexity 1 28 0 880 130 0 0 chr10 123562669 123562800 -16753965 + AluJb SINE Alu 1 131 -181 2866 78 18 8 chr10 123563407 123563792 -16752973 + L1PA7 LINE L1 5764 6152 -2 790 272 62 12 chr10 123563802 123564126 -16752639 - L1MC4 LINE L1 -260 7782 7443 311 180 0 0 chr10 123564758 123564808 -16751957 + 5S rRNA rRNA 2 51 -70 2500 166 15 14 chr10 123564882 123565400 -16751365 + L1MA5A LINE L1 5779 6297 0 957 252 45 36 chr10 123566229 123566562 -16750203 - L1ME3A LINE L1 0 6170 5835 928 207 0 32 chr10 123566725 123566913 -16749852 - MER5A DNA MER1_type -7 182 1 392 300 17 0 chr10 123567894 123568014 -16748751 - L2 LINE L2 -2 3311 3190 288 313 2 24 chr10 123568014 123568108 -16748657 - L2 LINE L2 -331 2982 2890 724 338 71 6 chr10 123568191 123568531 -16748234 - L2 LINE L2 -603 2711 2350 1388 122 37 0 chr10 123568532 123568746 -16748019 + AluSq SINE Alu 77 298 -15 184 292 42 0 chr10 123569783 123569831 -16746934 + MER5A DNA MER1_type 11 60 -129 359 311 82 30 chr10 123570291 123570558 -16746207 + MARNA DNA Mariner 175 455 -131 536 279 108 30 chr10 123570798 123571067 -16745698 - L2 LINE L2 -52 3261 2972 1718 124 6 68 chr10 123571132 123571454 -16745311 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 123571577 123571599 -16745166 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr10 123572684 123572720 -16744045 + AT_rich Low_complexity Low_complexity 1 36 0 1605 52 0 14 chr10 123573486 123573771 -16742994 + L1P1 LINE L1 5187 5468 -687 884 318 90 5 chr10 123574105 123574612 -16742153 + L2 LINE L2 2709 3253 -60 785 238 31 72 chr10 123576468 123576787 -16739978 - MLT1F1 LTR MaLR -255 312 7 1664 167 3 7 chr10 123577291 123577591 -16739174 + AluJo SINE Alu 1 299 -13 637 206 14 20 chr10 123577995 123578141 -16738624 - MLT1H1 LTR MaLR -85 470 326 234 240 0 80 chr10 123578168 123578243 -16738522 - MLT1G LTR MaLR -284 311 243 293 248 119 30 chr10 123578400 123578501 -16738264 - MLT1G LTR MaLR -462 128 19 1593 202 3 0 chr10 123578723 123579005 -16737760 - MLT1C LTR MaLR -184 283 1 264 125 0 0 chr10 123579524 123579564 -16737201 - MSTA LTR MaLR 0 428 389 243 179 0 36 chr10 123579571 123579627 -16737138 + AluJ/FLAM SINE Alu 9 62 -240 2267 128 27 35 chr10 123580131 123580498 -16736267 + THE1B LTR MaLR 1 364 0 784 238 33 28 chr10 123580584 123580765 -16736000 + MER5A DNA MER1_type 2 183 -6 250 258 65 0 chr10 123580841 123580903 -16735862 + MER5A DNA MER1_type 118 183 -6 205 342 13 13 chr10 123581511 123581587 -16735178 + MIR SINE MIR 39 114 -94 230 189 68 83 chr10 123583710 123583842 -16732923 + Tigger1 DNA MER2_type 359 488 -1930 7380 127 43 3 chr10 123583936 123585153 -16731612 + Tigger1 DNA MER2_type 538 1802 -616 814 99 146 13 chr10 123585422 123585573 -16731192 - Tigger4(Zombi) DNA MER2_type -29 2702 2532 578 140 159 0 chr10 123585577 123585684 -16731081 - Tigger4(Zombi) DNA MER2_type -2607 124 1 287 360 17 22 chr10 123585820 123585998 -16730767 + MIR SINE MIR 31 207 -55 2807 255 34 17 chr10 123586980 123588054 -16728711 - L1P LINE L1 -2742 3404 2313 4222 26 4 0 chr10 123588437 123588942 -16727823 - L1PA4 LINE L1 -150 6005 5499 1188 155 0 10 chr10 123589345 123589538 -16727227 - AluJo SINE Alu 0 312 122 216 0 0 0 chr10 123590764 123590788 -16725977 + (TC)n Simple_repeat Simple_repeat 2 25 0 538 115 0 13 chr10 123590792 123590870 -16725895 - AluJ/FRAM SINE Alu -20 292 216 280 314 34 51 chr10 123590988 123591224 -16725541 + L2 LINE L2 2704 2935 -379 910 278 22 4 chr10 123592684 123592911 -16723854 + MIR SINE MIR 11 241 -21 802 122 0 83 chr10 123594423 123594579 -16722186 + L1M4 LINE L1 5522 5664 -520 429 202 30 0 chr10 123594608 123594707 -16722058 + L1M4 LINE L1 5646 5747 -431 1840 179 36 82 chr10 123594708 123595233 -16721532 + L1MB7 LINE L1 5670 6170 -14 410 298 77 22 chr10 123595254 123595435 -16721330 + MIR SINE MIR 72 262 0 2550 101 25 8 chr10 123596291 123596649 -16720116 - THE1B LTR MaLR 0 364 1 1148 214 87 79 chr10 123596651 123596887 -16719878 - MSTD LTR MaLR 0 396 154 2317 103 0 29 chr10 123596887 123597063 -16719702 - AluSg SINE Alu -9 301 136 2646 48 0 13 chr10 123597063 123597376 -16719389 - AluY SINE Alu -2 309 1 2317 103 0 29 chr10 123597376 123597509 -16719256 - AluSg SINE Alu -174 136 1 1148 214 87 79 chr10 123597509 123597665 -16719100 - MSTD LTR MaLR -242 154 1 333 167 14 14 chr10 123599042 123599114 -16717651 + L1MB3 LINE L1 6100 6171 -12 279 256 77 0 chr10 123599445 123599523 -16717242 - MIR SINE MIR -60 202 119 546 314 14 36 chr10 123599842 123600062 -16716703 + MIR SINE MIR 37 251 -11 531 222 54 54 chr10 123600016 123600201 -16716564 - MIR SINE MIR -21 241 57 * 256 314 58 16 chr10 123602515 123602636 -16714129 - L2 LINE L2 0 3272 3147 1437 216 162 37 chr10 123602848 123603265 -16713500 + MLT2B1 LTR ERVL 1 483 -37 315 49 0 0 chr10 123603265 123603306 -16713459 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 1437 216 162 37 chr10 123603306 123603350 -16713415 + MLT2B1 LTR ERVL 483 520 0 1686 80 26 9 chr10 123604802 123605028 -16711737 + MER30 DNA MER1_type 1 230 0 436 203 0 0 chr10 123607122 123607196 -16709569 - MER81 DNA DNA -39 75 2 192 203 116 29 chr10 123607197 123607253 -16709512 + MIR3 SINE MIR 119 183 -25 2291 98 7 7 chr10 123607253 123607558 -16709207 - AluSq SINE Alu -8 305 1 192 203 116 29 chr10 123607558 123607570 -16709195 + MIR3 SINE MIR 183 193 -15 2270 40 40 50 chr10 123609909 123610206 -16706559 + AluY SINE Alu 1 294 -17 216 277 72 12 chr10 123610207 123610290 -16706475 + MIR SINE MIR 82 169 -93 299 68 91 0 chr10 123610656 123610700 -16706065 - Alu SINE Alu -17 285 238 318 207 11 58 chr10 123610702 123610789 -16705976 + MIR SINE MIR 102 184 -78 2189 99 18 0 chr10 123612128 123612412 -16704353 + AluSx SINE Alu 1 289 -23 22 70 0 0 chr10 123612573 123612616 -16704149 + AT_rich Low_complexity Low_complexity 1 43 0 2308 115 3 3 chr10 123612623 123612935 -16703830 + AluSq SINE Alu 1 312 -1 826 232 90 18 chr10 123613461 123613693 -16703072 + MIR SINE MIR 12 257 -5 491 233 29 10 chr10 123613705 123613808 -16702957 + L2 LINE L2 3205 3309 -4 36 70 0 0 chr10 123613908 123613979 -16702786 + AT_rich Low_complexity Low_complexity 1 71 0 2481 238 63 88 chr10 123614093 123615262 -16701503 - L1MC5 LINE L1 -102 7859 6720 340 307 33 46 chr10 123615668 123615914 -16700851 - MIR SINE MIR -22 240 4 247 315 55 16 chr10 123619252 123619379 -16697386 + MER5A DNA MER1_type 7 138 -51 * 302 252 65 28 chr10 123619275 123619382 -16697383 - MER5A DNA MER1_type -19 170 60 457 266 0 9 chr10 123624224 123624337 -16692428 + MIR SINE MIR 81 192 -70 291 235 118 10 chr10 123624378 123624480 -16692285 + MIR SINE MIR 108 220 -42 339 65 0 0 chr10 123624968 123625014 -16691751 + (TG)n Simple_repeat Simple_repeat 1 46 0 338 182 52 13 chr10 123625048 123625125 -16691640 - MER20 DNA MER1_type -114 105 26 183 226 75 38 chr10 123625883 123625936 -16690829 + L2 LINE L2 3214 3268 -4 267 150 30 181 chr10 123626093 123626226 -16690539 + MER81 DNA DNA 2 114 0 379 303 127 9 chr10 123626405 123626524 -16690241 + MIR SINE MIR 15 119 -143 1558 221 52 47 chr10 123626524 123626989 -16689776 - MLT1C LTR MaLR 0 467 1 379 303 127 9 chr10 123626989 123627090 -16689675 + MIR SINE MIR 119 261 -1 2345 97 0 28 chr10 123628501 123628822 -16687943 - AluSx SINE Alu 0 312 1 206 253 24 6 chr10 123629482 123629547 -16687218 + MIR3 SINE MIR 117 183 -52 1451 232 107 23 chr10 123630479 123630731 -16686034 - MLT1C LTR MaLR 0 467 237 2521 80 0 0 chr10 123630731 123631033 -16685732 - AluY SINE Alu -9 302 1 1451 232 107 23 chr10 123631033 123631211 -16685554 - MLT1C LTR MaLR -230 237 1 1608 223 77 32 chr10 123631411 123631881 -16684884 + Charlie4a DNA MER1_type 18 508 0 305 246 127 28 chr10 123632141 123632283 -16684482 + L1ME4a LINE L1 5966 6121 0 2187 115 0 19 chr10 123632351 123632663 -16684102 + AluSx SINE Alu 1 306 -6 2569 60 3 0 chr10 123633564 123633865 -16682900 - AluY SINE Alu -9 302 1 246 253 0 174 chr10 123634029 123634207 -16682558 + MIR SINE MIR 37 183 -79 266 303 0 34 chr10 123634321 123634410 -16682355 - MIR SINE MIR -101 107 34 654 248 7 0 chr10 123634581 123634722 -16682043 - MIR SINE MIR -112 150 9 429 316 35 11 chr10 123634901 123635075 -16681690 + MIR SINE MIR 36 213 -49 1320 182 16 67 chr10 123636166 123636278 -16680487 - MER58B DNA MER1_type -2082 338 222 333 0 0 0 chr10 123636278 123636315 -16680450 + (CA)n Simple_repeat Simple_repeat 2 38 0 1320 182 16 67 chr10 123636315 123636515 -16680250 - MER58B DNA MER1_type -2198 222 42 2120 105 0 4 chr10 123636598 123636915 -16679850 - AluSq SINE Alu 0 324 9 1642 305 40 10 chr10 123638652 123639173 -16677592 + L1PA16 LINE L1 1 537 -6250 16176 217 29 18 chr10 123639288 123640757 -16676008 + L1PA16 LINE L1 1323 2774 -4043 2380 81 0 3 chr10 123640757 123641054 -16675711 + AluSg SINE Alu 11 306 -4 16176 217 29 18 chr10 123641054 123644911 -16671854 + L1PA16 LINE L1 2774 6720 -97 316 262 89 6 chr10 123645126 123645289 -16671476 - L1MC/D LINE L1 -687 5434 5294 1771 126 15 19 chr10 123645416 123645687 -16671078 - AluSx SINE Alu -4 308 39 483 293 70 37 chr10 123645694 123645936 -16670829 - MIR SINE MIR -12 250 1 309 223 204 0 chr10 123645998 123646101 -16670664 - MER5B DNA MER1_type -2 176 53 725 167 0 0 chr10 123646110 123646230 -16670535 - FLAM_A SINE Alu -2 140 21 217 229 21 0 chr10 123646232 123646280 -16670485 + MER5B DNA MER1_type 125 173 -5 2067 95 43 20 chr10 123646380 123646684 -16670081 + AluSx SINE Alu 1 311 -1 661 213 153 33 chr10 123647506 123647739 -16669026 + L1MC4a LINE L1 5260 5538 -2270 311 234 26 0 chr10 123647739 123647816 -16668949 + MER116 DNA Mariner 1 79 -1 661 213 153 33 chr10 123647816 123647883 -16668882 + L1MC4a LINE L1 5538 5596 -2212 421 260 39 13 chr10 123647993 123648147 -16668618 + L1MC4a LINE L1 5779 5936 -1872 22 0 0 0 chr10 123648332 123648354 -16668411 + AT_rich Low_complexity Low_complexity 1 22 0 3547 150 43 11 chr10 123649257 123649890 -16666875 + L1MB8 LINE L1 5525 6177 -1 211 218 0 77 chr10 123650245 123650323 -16666442 + MIR3 SINE MIR 1 72 -136 1255 193 47 43 chr10 123650337 123650674 -16666091 + Tigger7 DNA MER2_type 2 2491 0 187 246 53 0 chr10 123650846 123650903 -16665862 + MIR SINE MIR 81 140 -122 314 349 7 7 chr10 123651338 123651487 -16665278 + (TGGA)n Simple_repeat Simple_repeat 3 151 0 189 262 0 0 chr10 123651494 123651555 -16665210 + (TAGA)n Simple_repeat Simple_repeat 3 63 0 208 315 43 22 chr10 123652251 123652343 -16664422 - L2 LINE L2 0 3272 3179 7959 170 31 14 chr10 123652448 123653842 -16662923 + L1PB4 LINE L1 3686 5123 -1033 1974 102 0 8 chr10 123653842 123654107 -16662658 + AluSq SINE Alu 49 311 -2 7959 170 31 14 chr10 123654107 123655159 -16661606 + L1PB4 LINE L1 5123 6156 0 427 213 37 19 chr10 123655225 123655333 -16661432 + MIR3 SINE MIR 99 208 0 1027 217 80 20 chr10 123655859 123656108 -16660657 + MLT1A1 LTR MaLR 102 365 0 548 265 91 13 chr10 123656196 123656426 -16660339 - L1MC/D LINE L1 -1988 5820 5573 391 265 8 0 chr10 123657212 123657455 -16659310 + (TCCA)n Simple_repeat Simple_repeat 1 245 0 804 254 121 94 chr10 123658059 123658728 -16658037 + L1MC4 LINE L1 7354 8040 -2 252 128 85 0 chr10 123659283 123659330 -16657435 - Charlie8 DNA MER1_type -1014 1403 1353 301 202 0 17 chr10 123659348 123659467 -16657298 + GA-rich Low_complexity Low_complexity 1 117 0 490 147 12 60 chr10 123659478 123659745 -16657020 + GA-rich Low_complexity Low_complexity 1 254 0 234 176 68 54 chr10 123659745 123659819 -16656946 + L1MC4 LINE L1 6626 6700 -1342 244 239 23 11 chr10 123659860 123659948 -16656817 - L1MC4 LINE L1 -1339 6703 6615 685 189 0 27 chr10 123659957 123660142 -16656623 + (TA)n Simple_repeat Simple_repeat 1 180 0 301 270 0 22 chr10 123660149 123660238 -16656527 - L1MC4 LINE L1 -1342 6700 6614 233 119 0 0 chr10 123660240 123660282 -16656483 - LTR66 LTR ERVL -171 439 398 188 352 44 0 chr10 123661406 123661497 -16655268 - L2 LINE L2 -28 3244 3150 1938 144 14 0 chr10 123662070 123662348 -16654417 - AluSx SINE Alu -26 286 5 277 310 0 0 chr10 123662353 123662440 -16654325 + MIR SINE MIR 98 184 -78 513 274 97 0 chr10 123663138 123663324 -16653441 + MIR SINE MIR 47 250 -12 180 0 0 0 chr10 123663328 123663348 -16653417 + (CAT)n Simple_repeat Simple_repeat 1 20 0 305 274 0 0 chr10 123664596 123664669 -16652096 + MIR SINE MIR 108 180 -82 251 158 0 53 chr10 123664882 123664939 -16651826 - L2 LINE L2 -1 3271 3218 2570 64 0 0 chr10 123665093 123665434 -16651331 - AluY SINE Alu 0 341 1 1641 175 20 3 chr10 123665534 123665831 -16650934 - AluJo SINE Alu -10 302 1 223 369 25 0 chr10 123667179 123667301 -16649464 - MIR SINE MIR -78 184 60 762 204 7 0 chr10 123667349 123667491 -16649274 - MER3 DNA MER1_type -66 143 1 2029 188 47 57 chr10 123668080 123668497 -16648268 + Charlie4a DNA MER1_type 2 415 -1546 2269 88 37 0 chr10 123668497 123668794 -16647971 + AluY SINE Alu 1 308 -3 2029 188 47 57 chr10 123668794 123668888 -16647877 + Charlie4a DNA MER1_type 415 508 0 335 256 12 0 chr10 123670199 123670285 -16646480 - MER5A DNA MER1_type -53 136 50 637 51 13 0 chr10 123670320 123670398 -16646367 + MADE1 DNA Mariner 2 80 0 643 234 112 15 chr10 123670916 123671121 -16645644 - MIR SINE MIR -1 261 37 21 0 0 0 chr10 123672458 123672479 -16644286 + AT_rich Low_complexity Low_complexity 1 21 0 2394 93 0 0 chr10 123673501 123673801 -16642964 + AluY SINE Alu 1 300 -11 2450 75 0 13 chr10 123674041 123674347 -16642418 + AluY SINE Alu 1 302 -9 2098 96 11 4 chr10 123674364 123674644 -16642121 + AluY SINE Alu 16 297 -14 2007 192 42 32 chr10 123674687 123675160 -16641605 - L1ME3 LINE L1 -179 5983 5506 2036 112 43 16 chr10 123675360 123675664 -16641101 + AluSx SINE Alu 1 312 0 263 297 223 8 chr10 123675918 123676365 -16640400 + L2 LINE L2 2776 3312 -1 694 101 9 37 chr10 123676407 123676562 -16640203 + FLAM_A SINE Alu 18 142 0 633 258 48 5 chr10 123676594 123676780 -16639985 + LTR33 LTR ERVL 14 207 -314 288 241 15 90 chr10 123677298 123677431 -16639334 + L3 LINE CR1 1348 1470 -107 260 275 133 8 chr10 123677820 123677940 -16638825 - MIR3 SINE MIR -40 168 34 1742 180 3 3 chr10 123678438 123678733 -16638032 - AluJb SINE Alu -17 295 1 294 308 66 25 chr10 123678900 123679098 -16637667 - L2 LINE L2 -1 3312 3107 1637 162 35 109 chr10 123679202 123679596 -16637169 - MLT1A1 LTR MaLR 0 365 1 2134 160 108 12 chr10 123679605 123680029 -16636736 + MLT1C LTR MaLR 1 465 -2 2377 100 0 0 chr10 123680433 123680732 -16636033 + AluSq SINE Alu 1 299 -14 2550 73 0 0 chr10 123680732 123681033 -16635732 + AluY SINE Alu 1 302 -9 262 219 167 0 chr10 123681246 123681342 -16635423 - MER5B DNA MER1_type -4 174 63 227 196 59 0 chr10 123681372 123681423 -16635342 + MER5B DNA MER1_type 125 178 0 1381 80 54 92 chr10 123681671 123681910 -16634855 - MER30 DNA MER1_type 0 230 1 292 255 12 34 chr10 123681918 123682027 -16634738 - MIR SINE MIR -64 144 79 237 323 8 33 chr10 123684137 123684453 -16632312 + CT-rich Low_complexity Low_complexity 1 308 0 * 241 307 17 45 chr10 123684336 123684515 -16632250 + C-rich Low_complexity Low_complexity 5 178 0 28 0 0 0 chr10 123685062 123685090 -16631675 + AT_rich Low_complexity Low_complexity 1 28 0 1808 159 0 17 chr10 123685157 123685446 -16631319 - AluSx SINE Alu -24 288 5 267 312 0 0 chr10 123685451 123685528 -16631237 + MIR SINE MIR 98 174 -88 252 0 0 0 chr10 123686032 123686060 -16630705 + (C)n Simple_repeat Simple_repeat 1 28 0 246 220 51 0 chr10 123686370 123686429 -16630336 + MIR SINE MIR 86 147 -61 276 53 0 0 chr10 123686839 123686877 -16629888 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 284 237 10 103 chr10 123687199 123687296 -16629469 - MIR SINE MIR -66 196 109 2013 112 0 7 chr10 123687678 123687963 -16628802 + AluSx SINE Alu 1 283 -29 252 0 0 0 chr10 123688786 123688814 -16627951 + (TTA)n Simple_repeat Simple_repeat 1 28 0 2246 97 0 16 chr10 123690841 123691152 -16625613 + AluSx SINE Alu 1 306 -6 2092 170 15 0 chr10 123691243 123691584 -16625181 - MER7A DNA MER2_type -1 345 2 2011 128 0 0 chr10 123692025 123692313 -16624452 - AluSx SINE Alu -24 288 1 675 253 124 0 chr10 123692399 123692585 -16624180 - MER3 DNA MER1_type 0 209 1 231 241 114 0 chr10 123692677 123692756 -16624009 + L2 LINE L2 3157 3244 -28 504 225 24 0 chr10 123692823 123692992 -16623773 + (CATATA)n Simple_repeat Simple_repeat 4 176 0 308 216 0 68 chr10 123693049 123693123 -16623642 - L1MCa LINE L1 -4363 2063 1995 180 263 0 0 chr10 123693123 123693199 -16623566 + (CATA)n Simple_repeat Simple_repeat 4 79 0 340 266 204 0 chr10 123693375 123693488 -16623277 + L2 LINE L2 3137 3272 0 2379 50 0 13 chr10 123693605 123693907 -16622858 + AluY SINE Alu 1 298 -13 553 187 41 9 chr10 123693912 123694062 -16622703 + L1ME1 LINE L1 6035 6332 -2 299 279 12 23 chr10 123694917 123695003 -16621762 + MIR3 SINE MIR 94 178 -30 403 207 0 46 chr10 123695014 123695101 -16621664 + MER5B DNA MER1_type 5 87 -91 776 259 38 0 chr10 123695119 123695304 -16621461 + MER63A DNA MER1_type 10 201 -9 188 340 100 10 chr10 123695459 123695559 -16621206 + L2 LINE L2 3001 3109 -163 438 318 26 53 chr10 123696016 123696280 -16620485 - MIR SINE MIR 0 262 6 2018 117 0 0 chr10 123696623 123696951 -16619814 - AluSq SINE Alu 0 328 1 226 220 20 0 chr10 123698159 123698209 -16618556 + MER91B DNA MER1_type 12 62 -128 939 264 26 42 chr10 123698442 123698707 -16618058 + MIR SINE MIR 2 262 0 326 250 43 22 chr10 123698869 123698961 -16617804 + MIR SINE MIR 48 141 -121 211 189 38 0 chr10 123699023 123699076 -16617689 + (TTA)n Simple_repeat Simple_repeat 3 57 0 305 327 18 9 chr10 123699749 123699859 -16616906 + L2 LINE L2 2691 2801 -513 478 282 8 16 chr10 123700726 123700850 -16615915 + MIR SINE MIR 28 150 -112 2209 97 10 6 chr10 123701939 123702250 -16614515 - AluSx SINE Alu 0 312 1 296 295 13 0 chr10 123702578 123702656 -16614109 + (TG)n Simple_repeat Simple_repeat 2 80 0 1938 123 0 0 chr10 123702735 123703011 -16613754 - AluSx SINE Alu -9 303 28 199 257 57 67 chr10 123703548 123703653 -16613112 + L2 LINE L2 2956 3059 -213 253 159 79 16 chr10 123703810 123703873 -16612892 - L2 LINE L2 0 3272 3206 321 100 0 0 chr10 123705387 123705437 -16611328 + (TC)n Simple_repeat Simple_repeat 1 50 0 282 206 19 65 chr10 123705527 123705634 -16611131 - MLT1G1 LTR MaLR 0 595 494 601 281 116 10 chr10 123705946 123706145 -16610620 - MIR SINE MIR 0 262 43 819 210 11 34 chr10 123706329 123706505 -16610260 + MLT1H LTR MaLR 3 174 -375 723 193 128 37 chr10 123706551 123706738 -16610027 + MLT1H LTR MaLR 346 549 0 506 68 0 0 chr10 123707070 123707143 -16609622 - Alu SINE Alu 0 310 238 1406 76 0 11 chr10 123707250 123707435 -16609330 - AluY SINE Alu -128 183 1 530 291 20 20 chr10 123708286 123708437 -16608328 + L2 LINE L2 3122 3272 0 1140 177 90 61 chr10 123708578 123708956 -16607809 + LTR49-int LTR ERV1 4075 4463 -1868 2305 107 0 3 chr10 123759311 123759611 -16557154 + AluSg SINE Alu 1 299 -11 2318 88 0 0 chr10 123759955 123760274 -16556491 + L1PA8 LINE L1 5854 6172 0 326 165 5 5 chr10 123760314 123760393 -16556372 + Alu SINE Alu 1 51 -248 1537 162 0 0 chr10 123760393 123760621 -16556144 + AluSq SINE Alu 21 248 -65 249 128 0 0 chr10 123760666 123760713 -16556052 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 283 220 0 40 chr10 123760721 123760821 -16555944 + GA-rich Low_complexity Low_complexity 1 96 0 725 89 0 36 chr10 123761357 123761469 -16555296 + AluSc SINE Alu 195 302 -7 397 313 33 13 chr10 123761605 123761755 -16555010 + MIR SINE MIR 110 262 0 276 276 58 11 chr10 123761853 123761940 -16554825 - L3 LINE CR1 -165 1412 1322 1804 150 0 14 chr10 123761944 123762237 -16554528 - AluSx SINE Alu -23 289 1 2049 78 63 0 chr10 123762480 123762771 -16553994 - AluSq SINE Alu 0 308 1 690 65 11 0 chr10 123762970 123763062 -16553703 - AluSc SINE Alu -216 93 1 1468 205 29 17 chr10 123763067 123763282 -16553483 + MER4D LTR ERV1 549 771 -132 1950 124 69 36 chr10 123763282 123763645 -16553120 - THE1C LTR MaLR 0 375 1 1468 205 29 17 chr10 123763645 123763780 -16552985 + MER4D LTR ERV1 771 903 0 896 176 0 16 chr10 123763780 123763943 -16552822 + L1MB5 LINE L1 5978 6128 -52 1515 220 3 3 chr10 123763943 123764239 -16552526 + AluJo SINE Alu 3 298 -14 896 176 0 16 chr10 123764239 123764286 -16552479 + L1MB5 LINE L1 6128 6174 -6 3176 202 50 30 chr10 123764322 123764883 -16551882 + L1M4 LINE L1 3382 3971 -2175 2169 118 0 16 chr10 123764883 123765198 -16551567 + AluSx SINE Alu 1 310 -2 3176 202 50 30 chr10 123765198 123765546 -16551219 + L1M4 LINE L1 3971 4310 -1836 * 3511 163 46 25 chr10 123765544 123766264 -16550501 + L1MB3 LINE L1 121 855 -5529 * 4421 161 52 5 chr10 123766257 123767515 -16549250 + L1MB3 LINE L1 5099 6416 -3 4214 126 63 20 chr10 123767548 123768280 -16548485 + L1MD1 LINE L1 5479 6241 -1 1678 170 16 54 chr10 123768284 123768601 -16548164 + AluJo SINE Alu 1 305 -7 706 143 96 38 chr10 123768604 123768813 -16547952 + Charlie1 DNA MER1_type 2540 2760 -1 1138 92 0 0 chr10 123769491 123769644 -16547121 - AluSg/x SINE Alu -1 311 159 1318 88 0 6 chr10 123769644 123769814 -16546951 - AluSx SINE Alu -104 208 40 2325 106 0 3 chr10 123769823 123770126 -16546639 - AluSp SINE Alu -11 302 1 503 286 196 5 chr10 123770835 123771055 -16545710 + MIR SINE MIR 1 262 0 355 141 163 11 chr10 123771080 123771172 -16545593 + Charlie1 DNA MER1_type 2655 2760 -1 283 316 201 7 chr10 123771494 123771633 -16545132 + LTR50 LTR ERVL 18 183 -612 362 200 11 11 chr10 123771865 123771955 -16544810 + LTR33A LTR ERVL 434 523 0 287 312 151 20 chr10 123771955 123772154 -16544611 + L2 LINE L2 2750 2974 -340 528 155 19 0 chr10 123772300 123772403 -16544362 + L1MB3 LINE L1 6072 6176 -7 1916 148 0 3 chr10 123772439 123772767 -16543998 + AluJo SINE Alu 1 327 0 374 226 78 0 chr10 123773141 123773256 -16543509 - L1MC4a LINE L1 -1906 5902 5779 600 243 51 11 chr10 123774048 123774225 -16542540 + L1MB7 LINE L1 -74 109 -6353 * 2378 187 30 30 chr10 123774208 123774924 -16541841 + L1MB7 LINE L1 565 1274 -4851 768 168 77 5 chr10 123774926 123775122 -16541643 + L1MB7 LINE L1 1391 1600 -4964 * 3838 164 48 5 chr10 123775116 123775873 -16540892 + L1MB7 LINE L1 5770 6558 -44 27 36 0 36 chr10 123775930 123775957 -16540808 + AT_rich Low_complexity Low_complexity 1 27 -27 2168 108 0 7 chr10 123775957 123776245 -16540520 - AluSg SINE Alu -24 286 1 27 36 0 36 chr10 123776245 123776273 -16540492 + AT_rich Low_complexity Low_complexity 27 54 0 280 345 43 90 chr10 123776278 123776646 -16540119 - L2 LINE L2 -6 3266 2916 963 116 0 0 chr10 123776664 123776785 -16539980 - AluSq/x SINE Alu -179 133 13 23 0 0 0 chr10 123776785 123776808 -16539957 + AT_rich Low_complexity Low_complexity 1 23 0 271 230 115 0 chr10 123777839 123777926 -16538839 + MIR SINE MIR 92 188 -74 215 259 0 74 chr10 123778268 123778349 -16538416 + L3 LINE CR1 965 1039 -538 415 324 93 0 chr10 123778353 123778492 -16538273 + L2 LINE L2 3121 3272 0 209 333 91 10 chr10 123778526 123778625 -16538140 + L3 LINE CR1 1029 1135 -442 1188 193 33 51 chr10 123778701 123778926 -16537839 + L1M4 LINE L1 2945 3162 -2984 757 202 0 0 chr10 123778926 123779050 -16537715 + FLAM_A SINE Alu 1 124 -9 1188 193 33 51 chr10 123779050 123779218 -16537547 + L1M4 LINE L1 3162 3331 -2815 7855 205 29 33 chr10 123779224 123779654 -16537111 + L1MB5 LINE L1 2877 3307 -2867 1832 153 7 17 chr10 123779654 123779948 -16536817 + AluJo SINE Alu 3 293 -19 7855 205 29 33 chr10 123779948 123780880 -16535885 + L1MB5 LINE L1 3307 4241 -1933 207 0 0 0 chr10 123780880 123780903 -16535862 + (TA)n Simple_repeat Simple_repeat 2 24 0 7855 205 29 33 chr10 123780903 123781618 -16535147 + L1MB5 LINE L1 4241 4957 -1217 2269 88 3 7 chr10 123781618 123781914 -16534851 + AluY SINE Alu 1 295 -16 7855 205 29 33 chr10 123781914 123782955 -16533810 + L1MB5 LINE L1 4957 5982 -192 1477 154 67 0 chr10 123782955 123783208 -16533557 + MER49 LTR ERV1 1 270 -653 920 75 75 0 chr10 123783287 123783446 -16533319 - AluY SINE Alu -13 298 128 228 305 114 0 chr10 123784060 123784165 -16532600 - MIR SINE MIR 0 262 146 817 278 55 28 chr10 123784166 123784419 -16532346 - MIR SINE MIR -3 259 2 2235 108 0 0 chr10 123785384 123785679 -16531086 - AluSx SINE Alu -15 297 3 21 71 0 0 chr10 123785681 123785723 -16531042 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 123785882 123785911 -16530854 + AT_rich Low_complexity Low_complexity 1 29 0 427 233 136 10 chr10 123785935 123786038 -16530727 + L2 LINE L2 3150 3265 -7 402 244 24 73 chr10 123787517 123787640 -16529125 - MIR SINE MIR -108 154 38 2060 109 21 0 chr10 123787785 123788069 -16528696 + AluSc SINE Alu 1 290 -19 585 302 75 12 chr10 123788288 123788543 -16528222 + L1ME LINE L1 5515 5785 -336 437 225 16 28 chr10 123788667 123788826 -16527939 + L1P5 LINE L1 5315 5480 -676 760 295 62 7 chr10 123788893 123789198 -16527567 + L1ME4a LINE L1 5641 5962 -208 201 94 0 0 chr10 123789352 123789384 -16527381 + (TA)n Simple_repeat Simple_repeat 2 33 0 282 234 70 86 chr10 123789399 123789527 -16527238 + L1ME4a LINE L1 5950 6075 -46 335 137 44 22 chr10 123789549 123789872 -16526893 + (TA)n Simple_repeat Simple_repeat 1 330 0 207 0 0 0 chr10 123789874 123789897 -16526868 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2096 101 3 28 chr10 123789902 123790189 -16526576 - AluSx SINE Alu -30 282 3 23 0 0 0 chr10 123792451 123792474 -16524291 + AT_rich Low_complexity Low_complexity 1 23 0 898 101 8 0 chr10 123792481 123792600 -16524165 - FLAM_C SINE Alu -23 120 1 1106 23 0 0 chr10 123792709 123792837 -16523928 + L1PA5 LINE L1 6016 6143 -11 21 36 0 0 chr10 123792837 123792865 -16523900 + AT_rich Low_complexity Low_complexity 1 28 0 1785 157 7 17 chr10 123793345 123793638 -16523127 - AluJo SINE Alu -22 290 1 1536 203 7 10 chr10 123794312 123794608 -16522157 + AluJb SINE Alu 1 295 -17 32 43 0 0 chr10 123795181 123795227 -16521538 + AT_rich Low_complexity Low_complexity 1 46 0 526 144 5 219 chr10 123796667 123796789 -16519976 - MER5B DNA MER1_type -30 148 78 2437 81 0 3 chr10 123796789 123797099 -16519666 - AluSx SINE Alu -3 309 1 526 144 5 219 chr10 123797099 123797163 -16519602 - MER5B DNA MER1_type -100 78 2 264 257 181 41 chr10 123797837 123798008 -16518757 + MLT1K LTR MaLR 169 363 -225 180 0 0 0 chr10 123798271 123798291 -16518474 + (A)n Simple_repeat Simple_repeat 1 20 0 547 225 113 6 chr10 123799307 123799467 -16517298 + MER5B DNA MER1_type 2 178 0 422 324 83 20 chr10 123799481 123799685 -16517080 + MIR SINE MIR 43 259 -3 876 195 0 46 chr10 123800084 123800258 -16516507 - FRAM SINE Alu 0 166 1 2191 109 10 0 chr10 123800420 123800724 -16516041 - AluSx SINE Alu -5 307 1 2209 127 0 0 chr10 123800951 123801250 -16515515 + AluSx SINE Alu 3 301 -11 201 261 58 14 chr10 123801788 123801857 -16514908 - MIR3 SINE MIR -51 157 86 213 309 94 34 chr10 123801939 123802088 -16514677 - MIR3 SINE MIR -49 159 2 2778 13 0 6 chr10 123806208 123806521 -16510244 - AluY SINE Alu 0 311 1 521 261 25 70 chr10 123806719 123806960 -16509805 + L1MC5 LINE L1 7696 7925 -36 279 345 70 14 chr10 123807128 123807270 -16509495 + L2 LINE L2 3122 3271 -1 649 269 30 15 chr10 123807350 123807547 -16509218 - MIR SINE MIR -12 250 51 2162 82 0 53 chr10 123807887 123808191 -16508574 + AluSg SINE Alu 1 288 -22 572 227 211 23 chr10 123808825 123809085 -16507680 + L1ME LINE L1 5414 5722 -440 2286 97 0 0 chr10 123809176 123809474 -16507291 + AluSc SINE Alu 1 298 -11 201 316 68 30 chr10 123812243 123812376 -16504389 - L2 LINE L2 -12 3301 3164 21 0 0 0 chr10 123813141 123813162 -16503603 + AT_rich Low_complexity Low_complexity 1 21 0 215 244 0 0 chr10 123814534 123814579 -16502186 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 228 327 69 10 chr10 123814804 123814905 -16501860 + MIR SINE MIR 40 146 -62 180 204 41 82 chr10 123815873 123815922 -16500843 - L2 LINE L2 -12 3301 3255 243 0 0 0 chr10 123816405 123816432 -16500333 + (TG)n Simple_repeat Simple_repeat 2 28 0 1570 164 4 16 chr10 123816432 123816688 -16500077 - AluJb SINE Alu -27 285 33 22 35 0 0 chr10 123817200 123817229 -16499536 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 123817335 123817358 -16499407 + AT_rich Low_complexity Low_complexity 1 23 0 204 125 0 0 chr10 123817863 123817895 -16498870 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 809 132 23 8 chr10 123818198 123818327 -16498438 - FLAM_C SINE Alu -1 132 2 1325 157 0 19 chr10 123819040 123819256 -16497509 - AluJo SINE Alu -18 294 83 2081 125 0 7 chr10 123819781 123820085 -16496680 + AluSx SINE Alu 1 302 -10 2130 102 3 7 chr10 123820521 123820825 -16495940 + AluSg SINE Alu 1 303 0 198 143 0 0 chr10 123821149 123821184 -16495581 + (CA)n Simple_repeat Simple_repeat 2 36 0 2057 122 0 20 chr10 123821419 123821722 -16495043 + AluSx SINE Alu 1 297 -15 745 207 60 30 chr10 123821861 123822064 -16494701 + MIR SINE MIR 54 262 0 509 240 8 24 chr10 123822257 123822382 -16494383 - MER5B DNA MER1_type -2 176 54 513 172 0 0 chr10 123822384 123822506 -16494259 + (CATA)n Simple_repeat Simple_repeat 2 123 0 225 100 0 0 chr10 123822519 123822549 -16494216 + MER5B DNA MER1_type 137 166 -12 399 233 0 0 chr10 123822818 123822891 -16493874 - MER81 DNA DNA -16 98 26 1002 209 15 0 chr10 123822956 123823162 -16493603 - MER3 DNA MER1_type 0 209 1 347 265 49 76 chr10 123823548 123823771 -16492994 + L2 LINE L2 2834 3050 -222 210 283 0 0 chr10 123824017 123824070 -16492695 - MIR SINE MIR -108 154 102 201 167 42 21 chr10 123824119 123824167 -16492598 - L2 LINE L2 -2 3270 3222 1648 316 64 92 chr10 123824901 123825341 -16491424 + L1MCa LINE L1 24 475 -5951 616 182 27 0 chr10 123825341 123825451 -16491314 + AluJo/FLAM SINE Alu 4 116 -186 2407 74 0 16 chr10 123825452 123825762 -16491003 - AluSg SINE Alu -5 305 1 1648 316 64 92 chr10 123825762 123826066 -16490699 + L1MCa LINE L1 474 749 -5677 2875 153 39 55 chr10 123826066 123826370 -16490395 + L1MC2 LINE L1 5688 5995 -349 2153 115 7 0 chr10 123826370 123826674 -16490091 + AluSc SINE Alu 1 306 -3 2875 153 39 55 chr10 123826674 123827037 -16489728 + L1MC2 LINE L1 5995 6344 0 189 0 0 0 chr10 123827043 123827064 -16489701 + (CA)n Simple_repeat Simple_repeat 2 22 0 261 96 96 0 chr10 123827182 123827265 -16489500 + T-rich Low_complexity Low_complexity 3 93 0 1446 199 46 17 chr10 123827273 123827575 -16489190 - AluJo SINE Alu -1 311 1 976 150 36 0 chr10 123827945 123828112 -16488653 - L1MC3 LINE L1 -108 7677 7505 204 67 0 0 chr10 123828113 123828143 -16488622 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1504 238 98 27 chr10 123828144 123828662 -16488103 + MER34B LTR ERV1 11 565 0 373 312 34 49 chr10 123829017 123829222 -16487543 + MER34B-int LTR ERV1 307 508 -5823 2501 63 0 0 chr10 123829642 123829942 -16486823 + AluY SINE Alu 1 300 -11 1987 148 19 111 chr10 123830038 123830505 -16486260 - MSTB1 LTR MaLR -2 430 7 1874 158 0 0 chr10 123830597 123830921 -16485844 + AluJb SINE Alu 1 324 0 540 190 12 98 chr10 123831456 123831619 -16485146 + MER34B-int LTR ERV1 1541 1689 -4642 * 911 206 101 49 chr10 123831614 123831742 -16485023 + MER34B-int LTR ERV1 1021 1141 -3982 2405 93 0 3 chr10 123831742 123832054 -16484711 - AluY SINE Alu 0 311 1 911 206 101 49 chr10 123832054 123832480 -16484285 + MER34B-int LTR ERV1 1141 1826 -3297 7130 189 74 71 chr10 123832501 123835691 -16481074 + MER34B-int LTR ERV1 1683 6330 -1 1247 250 158 8 chr10 123835697 123836185 -16480580 + MER34B LTR ERV1 5 565 0 4672 143 107 25 chr10 123836186 123836549 -16480216 - L1MC3 LINE L1 -277 7508 7176 2269 89 0 0 chr10 123836549 123836842 -16479923 + AluY SINE Alu 1 293 -18 4672 143 107 25 chr10 123836842 123837058 -16479707 - L1MC3 LINE L1 -609 7176 6979 2033 152 15 29 chr10 123837058 123837400 -16479365 + MER44D DNA MER2_type 1 607 -2 4672 143 107 25 chr10 123837400 123837736 -16479029 - L1MC3 LINE L1 -806 6979 6517 869 163 0 0 chr10 123837738 123837867 -16478898 - FLAM_C SINE Alu -4 129 1 336 228 41 31 chr10 123837871 123837981 -16478784 + L1ME4a LINE L1 5704 5816 -518 341 174 28 55 chr10 123838004 123838113 -16478652 + L1ME4a LINE L1 5927 6032 -89 486 181 112 10 chr10 123838120 123838277 -16478488 + MER106A DNA MER1_type 1 236 0 2298 86 0 0 chr10 123838371 123838681 -16478084 + AluSg SINE Alu 1 310 0 295 235 15 0 chr10 123838806 123838874 -16477891 - MER5A DNA MER1_type -120 69 1 320 371 61 0 chr10 123839573 123839705 -16477060 + L2 LINE L2 3129 3268 -4 1885 127 7 13 chr10 123840331 123840630 -16476135 + L1MA4A LINE L1 6005 6301 -2 723 229 76 105 chr10 123840661 123840998 -16475767 + L1MC/D LINE L1 5363 5687 -497 424 270 79 16 chr10 123841007 123841133 -16475632 + L2 LINE L2 3180 3313 0 285 260 78 13 chr10 123842207 123842284 -16474481 - MIR SINE MIR -150 112 31 203 246 6 164 chr10 123842333 123842504 -16474261 - MIR3 SINE MIR -20 188 45 21 36 0 0 chr10 123842612 123842640 -16474125 + AT_rich Low_complexity Low_complexity 1 28 0 2228 77 28 0 chr10 123842640 123842925 -16473840 - AluSp SINE Alu -20 293 1 251 250 89 54 chr10 123844817 123844929 -16471836 + MIR SINE MIR 77 192 -70 207 88 0 0 chr10 123844969 123845003 -16471762 + (T)n Simple_repeat Simple_repeat 1 34 0 2725 30 0 0 chr10 123845023 123845325 -16471440 + AluY SINE Alu 1 302 -9 652 83 0 0 chr10 123846236 123846320 -16470445 + Alu SINE Alu 224 307 -3 1924 75 17 0 chr10 123846509 123846749 -16470016 + AluY SINE Alu 40 283 -28 236 289 221 0 chr10 123847124 123847228 -16469537 + L1MB8 LINE L1 5601 5727 -394 1335 195 18 57 chr10 123847237 123847571 -16469194 + L1MB8 LINE L1 5795 6115 -63 2153 109 0 3 chr10 123847571 123847878 -16468887 + AluSp SINE Alu 1 306 0 1107 237 39 33 chr10 123847887 123848362 -16468403 + L1M4c LINE L1 2212 2693 -3689 * 4658 236 53 7 chr10 123848332 123848362 -16468403 + L1M4c LINE L1 3173 3200 -3182 2525 50 10 0 chr10 123848362 123848665 -16468100 + AluY SINE Alu 1 306 -5 4658 236 53 7 chr10 123848665 123849153 -16467612 + L1M4c LINE L1 3200 3664 -2718 213 39 0 0 chr10 123849153 123849179 -16467586 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 4658 236 53 7 chr10 123849179 123849951 -16466814 + L1M4c LINE L1 3664 4524 -1858 1090 222 11 18 chr10 123849944 123850219 -16466546 - L1 LINE L1 -1104 5042 4770 * 2935 216 82 76 chr10 123850214 123850598 -16466167 + L1MC3 LINE L1 4197 4577 -1569 2564 55 3 0 chr10 123850598 123850908 -16465857 + AluY SINE Alu 1 311 0 2935 216 82 76 chr10 123850908 123851563 -16465202 + L1MC3 LINE L1 4577 5242 -904 237 109 0 22 chr10 123851632 123851678 -16465087 + L1MC3 LINE L1 5255 5299 -2486 738 199 107 0 chr10 123851684 123851815 -16464950 + FRAM SINE Alu 8 152 -24 4108 231 19 57 chr10 123851827 123851910 -16464855 + L1MC3 LINE L1 5279 5364 -2421 2200 112 3 0 chr10 123851910 123852213 -16464552 - AluSx SINE Alu -8 304 1 4108 231 19 57 chr10 123852213 123853386 -16463379 + L1MC3 LINE L1 5364 6487 -1298 2342 106 3 0 chr10 123854058 123854370 -16462395 - AluSp SINE Alu 0 313 1 1998 135 0 0 chr10 123855145 123855446 -16461319 - AluSx SINE Alu 0 301 1 3689 195 120 92 chr10 123855506 123855949 -16460816 + L1MC3 LINE L1 6488 6917 -868 2671 32 0 7 chr10 123855949 123856257 -16460508 + AluY SINE Alu 1 306 -5 3689 195 120 92 chr10 123856257 123856407 -16460358 + L1MC3 LINE L1 6917 7061 -724 392 244 12 0 chr10 123856407 123856489 -16460276 + MLT1F1 LTR MaLR 49 131 -436 3689 195 120 92 chr10 123856489 123857064 -16459701 + L1MC3 LINE L1 7061 7773 -12 3494 224 74 81 chr10 123857068 123857308 -16459457 + L1ME2 LINE L1 3843 4083 -2079 2285 96 3 7 chr10 123857308 123857610 -16459155 - AluSg SINE Alu -9 301 1 3494 224 74 81 chr10 123857610 123857929 -16458836 + L1ME2 LINE L1 4083 4403 -1759 1642 197 14 0 chr10 123857929 123858218 -16458547 - AluJb SINE Alu -14 298 6 3494 224 74 81 chr10 123858218 123858299 -16458466 + L1ME2 LINE L1 4403 4483 -1679 1593 186 51 3 chr10 123858299 123858594 -16458171 + AluJo SINE Alu 1 309 -3 3494 224 74 81 chr10 123858594 123858950 -16457815 + L1ME2 LINE L1 4483 4840 -1322 2213 92 0 33 chr10 123858950 123859255 -16457510 + AluSx SINE Alu 3 297 -15 3494 224 74 81 chr10 123859255 123859831 -16456934 + L1ME2 LINE L1 4840 5382 -780 1906 95 6 104 chr10 123859831 123860148 -16456617 + AluSx SINE Alu 1 286 -16 3494 224 74 81 chr10 123860148 123860555 -16456210 + L1ME2 LINE L1 5382 5790 -372 1190 193 100 14 chr10 123860556 123860898 -16455867 + MLT2C1 LTR ERVL 1 298 -99 241 221 15 0 chr10 123860904 123860972 -16455793 + L1ME2 LINE L1 5788 5856 -308 2085 134 10 0 chr10 123861379 123861677 -16455088 + AluSx SINE Alu 1 301 -11 936 183 61 35 chr10 123862854 123863084 -16453681 + L1ME2 LINE L1 5862 6097 -67 2729 32 0 13 chr10 123863084 123863398 -16453367 - AluY SINE Alu -1 310 1 315 264 50 82 chr10 123863463 123863683 -16453082 + L1MC4 LINE L1 7829 8041 -1 10203 172 26 22 chr10 123863743 123865161 -16451604 + L1MA2 LINE L1 19 1429 -6136 2143 133 3 0 chr10 123865161 123865462 -16451303 - AluSq SINE Alu -11 302 1 10203 172 26 22 chr10 123865462 123865870 -16450895 + L1MA2 LINE L1 1429 1856 -5709 2431 154 63 19 chr10 123865870 123866239 -16450526 + MSTA LTR MaLR 1 391 -37 2385 94 0 0 chr10 123866239 123866538 -16450227 - AluY SINE Alu -12 299 1 2431 154 63 19 chr10 123866538 123866578 -16450187 + MSTA LTR MaLR 391 428 0 10203 172 26 22 chr10 123866578 123866591 -16450174 + L1MA2 LINE L1 1856 1867 -5698 9648 166 19 12 chr10 123866583 123868218 -16448547 + MSTA-int LTR MaLR 6 1651 0 * 2408 124 25 3 chr10 123868218 123868582 -16448183 + MSTA LTR MaLR 1 372 -56 324 102 0 0 chr10 123868582 123868631 -16448134 + (TC)n Simple_repeat Simple_repeat 1 49 0 2121 105 20 14 chr10 123868631 123868927 -16447838 - AluSc SINE Alu -11 298 1 379 115 66 0 chr10 123868927 123868988 -16447777 + MSTA LTR MaLR 364 428 0 16714 140 23 13 chr10 123868988 123870947 -16445818 + L1MA2 LINE L1 1851 3787 -3936 2361 88 0 3 chr10 123870947 123871244 -16445521 - AluY SINE Alu -15 296 1 16714 140 23 13 chr10 123871244 123873100 -16443665 + L1MA2 LINE L1 3787 5621 -2102 2168 126 3 0 chr10 123873100 123873394 -16443371 + AluSx SINE Alu 1 295 -17 16714 140 23 13 chr10 123873394 123874410 -16442355 + L1MA2 LINE L1 5621 6624 -1099 2297 87 20 3 chr10 123874410 123874708 -16442057 + AluSp SINE Alu 1 303 -10 16714 140 23 13 chr10 123874708 123875667 -16441098 + L1MA2 LINE L1 6624 7717 -6 912 215 31 9 chr10 123875686 123875909 -16440856 + L1MC1 LINE L1 4171 4398 -1748 775 177 8 0 chr10 123875909 123876033 -16440732 + FLAM_C SINE Alu 13 137 -6 1676 208 40 23 chr10 123876037 123876466 -16440299 + L1MC1 LINE L1 4377 4812 -1334 1657 140 12 0 chr10 123876466 123876709 -16440056 + AluSg SINE Alu 1 246 -64 506 157 74 25 chr10 123876951 123877072 -16439693 - AluJb SINE Alu -184 128 2 6528 140 23 20 chr10 123877072 123878204 -16438561 + L1MC1 LINE L1 5081 6226 -107 2441 75 10 0 chr10 123878204 123878511 -16438254 + AluY SINE Alu 1 310 -1 6528 140 23 20 chr10 123878511 123878620 -16438145 + L1MC1 LINE L1 6226 6333 0 1536 247 61 2 chr10 123878637 123879079 -16437686 + L1M4 LINE L1 4455 4922 -1224 284 94 94 62 chr10 123879075 123879139 -16437626 + L1MC/D LINE L1 5415 5480 -2305 * 671 139 9 0 chr10 123879137 123879245 -16437520 + L1MC3 LINE L1 7610 7718 -67 228 86 0 0 chr10 123879547 123879582 -16437183 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1433 58 6 0 chr10 123879585 123879758 -16437007 - L1PA4 LINE L1 -6 6149 5976 201 341 37 0 chr10 123880538 123880620 -16436145 - MIR SINE MIR -116 146 62 2081 115 21 0 chr10 123881261 123881547 -16435218 - AluSx SINE Alu -20 292 1 261 0 0 0 chr10 123881753 123881782 -16434983 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 831 112 7 53 chr10 123881784 123881936 -16434829 - AluY SINE Alu -31 280 136 684 83 0 0 chr10 123882228 123882324 -16434441 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 240 35 0 0 chr10 123882325 123882354 -16434411 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 954 190 22 6 chr10 123882356 123882535 -16434230 + FRAM SINE Alu 1 174 -2 358 285 233 19 chr10 123882773 123883043 -16433722 - L2 LINE L2 -67 3246 2919 981 333 92 52 chr10 123883212 123883751 -16433014 - L2 LINE L2 -1 3271 2755 2180 96 3 32 chr10 123883751 123884064 -16432701 + AluSq SINE Alu 1 304 -9 216 0 0 0 chr10 123884070 123884094 -16432671 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 981 333 92 52 chr10 123884094 123884553 -16432212 - L2 LINE L2 -521 2751 2225 1860 129 8 0 chr10 123884553 123884809 -16431956 + AluSq SINE Alu 1 258 -55 355 381 40 0 chr10 123884809 123885032 -16431733 - L2 LINE L2 -1388 1926 1695 254 125 0 0 chr10 123885032 123885072 -16431693 + AluSc SINE Alu 255 294 -5 313 304 165 25 chr10 123885110 123885353 -16431412 + L1MC5 LINE L1 7631 7907 -54 726 337 49 20 chr10 123885424 123885916 -16430849 - L2 LINE L2 -1124 2190 1685 29 60 0 0 chr10 123887458 123887508 -16429257 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr10 123887689 123887712 -16429053 + AT_rich Low_complexity Low_complexity 1 23 0 503 285 32 0 chr10 123887891 123888014 -16428751 - MIR SINE MIR -108 154 28 418 85 0 0 chr10 123888200 123888259 -16428506 + Alu SINE Alu 1 59 -253 1145 108 0 6 chr10 123888571 123888738 -16428027 + MLT2A1 LTR ERVL 197 362 -82 646 247 11 0 chr10 123888746 123888936 -16427829 + L1PBa LINE L1 6 197 -6666 * 4412 129 19 0 chr10 123888933 123889708 -16427057 + L1PBa LINE L1 1392 2181 -4682 743 201 98 6 chr10 123889754 123889928 -16426837 - MIR SINE MIR -10 252 63 472 324 18 102 chr10 123891850 123892183 -16424582 - L2 LINE L2 0 3272 2968 216 291 39 110 chr10 123892281 123892343 -16424422 - L2 LINE L2 -564 2750 2700 2139 135 0 3 chr10 123892343 123892646 -16424119 + AluJb SINE Alu 1 302 -10 216 291 39 110 chr10 123892646 123892710 -16424055 - L2 LINE L2 -614 2700 2633 2990 20 14 0 chr10 123893927 123894276 -16422489 - L1PA4 LINE L1 -1 6154 5801 1871 131 6 1 chr10 123894330 123894706 -16422059 + HSMAR2 DNA Mariner 289 710 -592 307 290 20 20 chr10 123895114 123895214 -16421551 + L1ME1 LINE L1 1717 1816 -4580 571 296 45 0 chr10 123895214 123895481 -16421284 - L1MCa LINE L1 -2655 3771 3493 41246 29 22 2 chr10 123895482 123901507 -16415258 - L1PA2 LINE L1 -2 6153 1 3440 214 46 30 chr10 123901508 123902362 -16414403 - L1MCa LINE L1 -2909 3517 2678 2369 68 3 3 chr10 123902362 123902658 -16414107 - AluSc SINE Alu -9 300 5 3440 214 46 30 chr10 123902658 123903051 -16413714 - L1MCa LINE L1 -3744 2682 2249 3360 174 9 32 chr10 123903051 123903746 -16413019 + L1MB4 LINE L1 5496 6174 -6 275 315 105 12 chr10 123903812 123904069 -16412696 + L1ME1 LINE L1 4823 5103 -1112 244 267 63 26 chr10 123904087 123904278 -16412487 + L1ME1 LINE L1 5148 5345 -870 1095 174 0 0 chr10 123904288 123904460 -16412305 + AluJo SINE Alu 24 195 -117 687 219 98 0 chr10 123905548 123905763 -16411002 + L1ME1 LINE L1 5997 6232 -3 4108 156 61 22 chr10 123905864 123907019 -16409746 + L1MB2 LINE L1 4966 6164 -7 350 314 128 0 chr10 123907085 123907187 -16409578 + MER91A DNA MER1_type 2 116 -80 516 72 0 0 chr10 123907198 123907267 -16409498 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 208 250 0 0 chr10 123907279 123907323 -16409442 + GA-rich Low_complexity Low_complexity 2 45 0 632 192 66 60 chr10 123907635 123907817 -16408948 - MIR SINE MIR -7 255 73 240 328 66 60 chr10 123908069 123908252 -16408513 + L2 LINE L2 2870 3053 -219 346 289 263 0 chr10 123908360 123908550 -16408215 - MIR SINE MIR -15 247 8 216 365 0 0 chr10 123908575 123908638 -16408127 + L2 LINE L2 3201 3263 -9 330 225 50 50 chr10 123909552 123909672 -16407093 - MIR SINE MIR -80 182 63 495 230 180 12 chr10 123909813 123909974 -16406791 + AluSg/x SINE Alu 121 308 -1 239 330 70 30 chr10 123909975 123910075 -16406690 - MIR SINE MIR -139 123 20 402 100 0 0 chr10 123913432 123913492 -16403273 + (CA)n Simple_repeat Simple_repeat 1 60 0 2283 74 0 29 chr10 123914535 123914847 -16401918 + AluY SINE Alu 1 303 -8 2036 108 73 27 chr10 123915420 123915443 -16401322 + L1PB2 LINE L1 5766 5786 -365 324 0 0 0 chr10 123915443 123915479 -16401286 + (CA)n Simple_repeat Simple_repeat 2 37 0 2036 108 73 27 chr10 123915479 123915824 -16400941 + L1PB2 LINE L1 5786 6151 0 246 385 52 0 chr10 123915941 123916037 -16400728 - MIR SINE MIR -160 102 2 27 0 0 0 chr10 123916044 123916071 -16400694 + AT_rich Low_complexity Low_complexity 1 27 0 195 189 0 0 chr10 123916135 123916172 -16400593 + L2 LINE L2 3272 3308 -5 406 250 171 33 chr10 123916207 123916329 -16400436 + MIR SINE MIR 46 194 -68 2404 81 3 13 chr10 123916329 123916639 -16400126 + AluSp SINE Alu 1 307 -6 406 250 171 33 chr10 123916639 123916668 -16400097 + MIR SINE MIR 194 218 -44 767 179 30 6 chr10 123916700 123916868 -16399897 + MER58B DNA MER1_type 167 338 -3 548 322 71 60 chr10 123917162 123917571 -16399194 - L2 LINE L2 -216 3056 2638 435 256 71 146 chr10 123917981 123918317 -16398448 + L3 LINE CR1 1262 1572 -5 25 0 0 0 chr10 123918372 123918397 -16398368 + AT_rich Low_complexity Low_complexity 1 25 0 225 94 0 0 chr10 123918438 123918470 -16398295 + (GAA)n Simple_repeat Simple_repeat 3 34 0 2278 119 0 3 chr10 123919513 123919824 -16396941 - AluSx SINE Alu -2 310 1 204 125 0 0 chr10 123919930 123919962 -16396803 + (TCCCC)n Simple_repeat Simple_repeat 4 35 0 2538 66 3 0 chr10 123919964 123920269 -16396496 - AluY SINE Alu -5 306 1 384 66 66 0 chr10 123920278 123920339 -16396426 - L1PA14 LINE L1 -2 6159 6095 312 200 133 0 chr10 123920425 123920500 -16396265 - MIR SINE MIR -65 197 113 189 388 0 0 chr10 123920640 123920707 -16396058 + L2 LINE L2 2995 3061 -211 2381 56 0 13 chr10 123920922 123921226 -16395539 + AluY SINE Alu 1 300 -11 216 333 86 26 chr10 123921616 123921733 -16395032 + L2 LINE L2 3184 3307 -6 473 277 3 23 chr10 123921815 123921991 -16394774 - MIR SINE MIR -65 197 30 1701 168 20 3 chr10 123922169 123922461 -16394304 + AluJb SINE Alu 1 297 -15 603 126 0 0 chr10 123922471 123922566 -16394199 + AluSg/x SINE Alu 211 305 -7 2291 96 0 3 chr10 123922608 123922911 -16393854 + AluSc SINE Alu 1 302 -7 688 265 30 0 chr10 123923293 123923459 -16393306 + MIR SINE MIR 88 258 -4 556 241 28 80 chr10 123923533 123923745 -16393020 - MIR SINE MIR -1 261 61 1076 169 0 0 chr10 123924257 123924423 -16392342 - FRAM SINE Alu 0 166 1 4619 28 0 0 chr10 123924610 123925145 -16391620 + L1PA5 LINE L1 5612 6146 -8 394 235 51 0 chr10 123925284 123925382 -16391383 + MIR SINE MIR 47 149 -113 572 230 43 7 chr10 123925382 123925521 -16391244 + MER5A DNA MER1_type 46 189 0 606 230 29 81 chr10 123925538 123925712 -16391053 - MER5B DNA MER1_type -6 172 8 402 277 0 0 chr10 123925714 123925808 -16390957 + MIR SINE MIR 158 251 -11 487 139 60 80 chr10 123925862 123925987 -16390778 + L1ME4a LINE L1 5971 6094 -27 2122 102 4 0 chr10 123925987 123926262 -16390503 - AluSx SINE Alu -1 311 36 487 139 60 80 chr10 123926262 123926287 -16390478 + L1ME4a LINE L1 6094 6118 -3 2082 119 6 31 chr10 123926774 123927094 -16389671 - AluSx SINE Alu 0 312 1 182 240 40 20 chr10 123927205 123927255 -16389510 - MIR SINE MIR -11 251 201 928 142 19 123 chr10 123927284 123927348 -16389417 - MER5A DNA MER1_type 0 189 120 2142 133 0 3 chr10 123927348 123927650 -16389115 + AluSx SINE Alu 1 301 -11 928 142 19 123 chr10 123927650 123927722 -16389043 - MER5A DNA MER1_type -69 120 79 2220 104 0 0 chr10 123927722 123928025 -16388740 - AluSg SINE Alu 0 303 1 928 142 19 123 chr10 123928025 123928097 -16388668 - MER5A DNA MER1_type -110 79 1 2120 141 0 0 chr10 123928387 123928699 -16388066 - AluSx SINE Alu 0 312 1 499 290 7 45 chr10 123928954 123929138 -16387627 - MIR SINE MIR -65 197 18 21 36 0 0 chr10 123929356 123929384 -16387381 + AT_rich Low_complexity Low_complexity 1 28 0 255 265 0 96 chr10 123930024 123930064 -16386701 - MIR SINE MIR -144 118 88 1208 205 50 57 chr10 123930064 123930201 -16386564 + AluJo SINE Alu 1 137 -165 2274 103 0 3 chr10 123930201 123930502 -16386263 + AluSx SINE Alu 5 304 -8 1208 205 50 57 chr10 123930502 123930661 -16386104 + AluJo SINE Alu 137 295 -7 255 265 0 96 chr10 123930661 123930703 -16386062 - MIR SINE MIR -174 88 44 415 239 120 42 chr10 123931324 123931491 -16385274 + MIR3 SINE MIR 18 197 -11 351 286 238 11 chr10 123931625 123931810 -16384955 + MIR SINE MIR 23 249 -13 273 230 81 0 chr10 123932210 123932284 -16384481 - MIR SINE MIR -16 246 167 185 339 223 0 chr10 123932313 123932425 -16384340 + MIR SINE MIR 19 155 -107 11749 143 21 24 chr10 123932434 123935130 -16381635 + L1MA4 LINE L1 3070 5777 -523 1916 84 4 0 chr10 123935130 123935392 -16381373 + L1PA11 LINE L1 5912 6174 0 11749 143 21 24 chr10 123935392 123935670 -16381095 + L1MA4 LINE L1 5777 6054 -246 6514 86 38 27 chr10 123935667 123936682 -16380083 + L1MA2 LINE L1 5182 6212 -92 * 2451 74 0 7 chr10 123936682 123936981 -16379784 - AluSg SINE Alu -13 297 1 6514 86 38 27 chr10 123936981 123937076 -16379689 + L1MA2 LINE L1 6212 6304 0 841 196 135 0 chr10 123937093 123937245 -16379520 + L1MA4 LINE L1 6036 6231 -69 2248 122 0 0 chr10 123937245 123937539 -16379226 - AluSx SINE Alu -14 298 5 841 196 135 0 chr10 123937539 123937616 -16379149 + L1MA4 LINE L1 6231 6296 -4 2240 108 0 7 chr10 123937729 123938024 -16378741 + AluSx SINE Alu 1 293 -19 932 132 56 89 chr10 123938051 123938185 -16378580 + MER2 DNA MER2_type 1 127 -218 2526 80 0 0 chr10 123938185 123938496 -16378269 + AluY SINE Alu 1 311 0 932 132 56 89 chr10 123938496 123938574 -16378191 + MER2 DNA MER2_type 127 206 -139 1690 180 7 20 chr10 123938608 123938913 -16377852 - AluJo SINE Alu -11 301 1 626 112 2 1 chr10 123938936 123939056 -16377709 + L1M2 LINE L1 5359 5477 -694 1982 105 4 0 chr10 123939441 123939698 -16377067 - AluSp SINE Alu -17 296 39 1944 136 30 33 chr10 123940057 123940359 -16376406 + AluSx SINE Alu 1 301 -11 2086 144 3 3 chr10 123940364 123940662 -16376103 + AluJb SINE Alu 1 298 -14 2149 106 0 3 chr10 123940947 123941229 -16375536 + AluSx SINE Alu 23 303 -9 288 245 80 11 chr10 123941241 123941338 -16375427 - MIR SINE MIR -68 140 38 471 207 121 7 chr10 123941547 123941687 -16375078 - MER117 DNA MER1_type -38 159 4 312 165 0 99 chr10 123942886 123943208 -16373557 + (CCTCG)n Simple_repeat Simple_repeat 1 290 0 974 296 57 13 chr10 123943981 123944299 -16372466 - LTR16A LTR ERVL -39 411 80 334 100 0 0 chr10 123944433 123944483 -16372282 - MIR3 SINE MIR -49 159 110 678 296 28 24 chr10 123944524 123944771 -16371994 - MIR SINE MIR -3 259 12 214 189 0 0 chr10 123944837 123944874 -16371891 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr10 123944942 123944963 -16371802 + AT_rich Low_complexity Low_complexity 1 21 0 281 289 0 13 chr10 123945532 123945608 -16371157 - L2 LINE L2 0 3272 3198 548 308 32 11 chr10 123945631 123945816 -16370949 - MER5A DNA MER1_type 0 189 1 270 0 0 0 chr10 123946082 123946112 -16370653 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 57 0 0 chr10 123946173 123946208 -16370557 + AT_rich Low_complexity Low_complexity 1 35 0 222 208 0 0 chr10 123946452 123946500 -16370265 + GA-rich Low_complexity Low_complexity 3 50 0 22 70 0 0 chr10 123947120 123947163 -16369602 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr10 123948957 123948992 -16367773 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 123950669 123950692 -16366073 + GC_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr10 123950749 123950773 -16365992 + (CGG)n Simple_repeat Simple_repeat 2 25 0 28 61 0 0 chr10 123953605 123953654 -16363111 + GC_rich Low_complexity Low_complexity 1 49 0 216 167 0 0 chr10 123954496 123954544 -16362221 + A-rich Low_complexity Low_complexity 1 48 0 2297 79 0 0 chr10 123958561 123958866 -16357899 - AluSc SINE Alu 0 305 1 1092 149 0 23 chr10 123958868 123959043 -16357722 - AluJb SINE Alu -4 308 138 428 269 74 34 chr10 123959074 123959249 -16357516 - MIR SINE MIR -61 201 20 1997 143 17 3 chr10 123959771 123960064 -16356701 + AluSg SINE Alu 1 297 -13 269 89 22 0 chr10 123960064 123960109 -16356656 + (GGA)n Simple_repeat Simple_repeat 1 46 0 330 132 40 0 chr10 123960363 123960439 -16356326 + CT-rich Low_complexity Low_complexity 1 79 0 204 40 0 0 chr10 123960439 123960464 -16356301 + (TG)n Simple_repeat Simple_repeat 2 26 0 543 258 12 37 chr10 123960793 123960956 -16355809 - MIR3 SINE MIR -13 195 37 457 303 118 57 chr10 123961794 123962022 -16354743 + MIR SINE MIR 19 260 -2 189 246 0 16 chr10 123962229 123962290 -16354475 - MIR SINE MIR -63 199 140 1071 280 122 10 chr10 123962290 123962785 -16353980 + MLT1G1 LTR MaLR 1 595 0 487 268 14 7 chr10 123962786 123962928 -16353837 - MIR SINE MIR -119 143 1 2023 123 3 44 chr10 123963088 123963562 -16353203 + AluSq SINE Alu 1 461 0 1005 138 69 6 chr10 123964261 123964421 -16352344 - AluSq SINE Alu -10 303 134 2329 115 3 0 chr10 123964421 123964725 -16352040 - AluSx SINE Alu -7 305 1 228 35 0 0 chr10 123966151 123966180 -16350585 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1938 137 4 0 chr10 123966464 123966734 -16350031 - AluSx SINE Alu -41 271 1 341 354 51 6 chr10 123967103 123967281 -16349484 + MIR3 SINE MIR 21 206 -2 479 76 0 0 chr10 123967690 123967756 -16349009 - MSTA LTR MaLR 0 428 363 2521 62 16 3 chr10 123967756 123968061 -16348704 + AluY SINE Alu 1 309 -2 1928 145 47 0 chr10 123968118 123968414 -16348351 + AluSx SINE Alu 1 310 -2 1803 120 157 9 chr10 123968416 123968740 -16348025 - MSTA LTR MaLR -56 372 1 351 0 0 0 chr10 123968773 123968812 -16347953 + (TG)n Simple_repeat Simple_repeat 2 40 0 2371 102 0 0 chr10 123968882 123969177 -16347588 + AluSx SINE Alu 1 295 -17 220 253 25 63 chr10 123969691 123969770 -16346995 - MIR3 SINE MIR -19 189 114 709 224 0 7 chr10 123970764 123970911 -16345854 - MIR SINE MIR -44 218 73 1905 151 49 51 chr10 123970919 123971310 -16345455 - MLT1B LTR MaLR 0 390 1 306 277 45 99 chr10 123971328 123971431 -16345334 - L2 LINE L2 -1 3312 3224 2343 103 0 7 chr10 123971431 123971731 -16345034 - AluSx SINE Alu -14 298 1 306 277 45 99 chr10 123971731 123971829 -16344936 - L2 LINE L2 -89 3224 3122 653 301 117 2 chr10 123971858 123972196 -16344569 - L2 LINE L2 -318 2995 2619 207 250 58 0 chr10 123972198 123972250 -16344515 - L2 LINE L2 -1 3312 3258 1536 209 4 4 chr10 123972618 123972896 -16343869 + AluJo SINE Alu 15 292 -20 286 274 88 0 chr10 123973138 123973240 -16343525 - L2 LINE L2 -757 2557 2447 331 278 38 53 chr10 123973245 123973378 -16343387 + MIR3 SINE MIR 15 145 -63 2268 128 3 0 chr10 123973398 123973704 -16343061 + AluSx SINE Alu 1 307 -5 214 227 10 103 chr10 123974033 123974130 -16342635 - MIR SINE MIR -64 198 111 185 279 33 0 chr10 123974201 123974262 -16342503 + L2 LINE L2 3160 3222 -91 2509 87 3 0 chr10 123974790 123975099 -16341666 + AluSp SINE Alu 1 310 -3 371 304 60 35 chr10 123975707 123975908 -16340857 - MIR SINE MIR -51 211 6 315 0 0 0 chr10 123978014 123978049 -16338716 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 123982088 123982108 -16334657 + (TG)n Simple_repeat Simple_repeat 2 21 0 444 220 40 0 chr10 123984217 123984317 -16332448 + MIR SINE MIR 31 134 -128 679 250 60 30 chr10 123984701 123984933 -16331832 - MIR SINE MIR -16 246 8 204 125 21 42 chr10 123986207 123986255 -16330510 + (CACCC)n Simple_repeat Simple_repeat 5 51 0 276 258 107 35 chr10 123986511 123986632 -16330133 - MIR SINE MIR -74 134 61 234 314 50 0 chr10 123987097 123987218 -16329547 - L1MC5 LINE L1 -181 7780 7654 337 242 168 89 chr10 123987326 123987516 -16329249 + MIR SINE MIR 31 235 -27 308 310 25 57 chr10 123988043 123988201 -16328564 + L2 LINE L2 3117 3269 -44 365 263 129 110 chr10 123989212 123989467 -16327298 - L2 LINE L2 -13 3259 3000 1630 123 21 0 chr10 123990363 123990599 -16326166 - AluSx SINE Alu -8 304 64 1980 110 48 24 chr10 123991192 123991483 -16325282 - AluSx SINE Alu -14 298 1 365 265 147 29 chr10 123993248 123993418 -16323347 + MIR3 SINE MIR 4 193 -15 2661 184 24 38 chr10 123994033 123994165 -16322600 - L1MB5 LINE L1 0 6174 6042 2304 90 0 7 chr10 123994165 123994454 -16322311 - AluSp SINE Alu -26 287 1 2661 184 24 38 chr10 123994454 123994897 -16321868 - L1MB5 LINE L1 -132 6042 5607 1604 123 43 20 chr10 123994899 123995152 -16321613 - AluSx SINE Alu -53 259 1 1565 188 30 4 chr10 123995236 123995601 -16321164 - MSTB LTR MaLR -4 422 1 243 224 0 0 chr10 123995811 123995860 -16320905 - MLT1I LTR MaLR -281 128 80 568 134 21 10 chr10 123995875 123995972 -16320793 + MER4A LTR ERV1 1 98 -566 1559 126 22 73 chr10 123995972 123996336 -16320429 + MER4A LTR ERV1 261 664 0 2290 87 31 0 chr10 123997103 123997224 -16319541 + AluSx SINE Alu 2 118 -194 228 35 0 0 chr10 123997224 123997253 -16319512 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2290 87 31 0 chr10 123997253 123997417 -16319348 + AluSx SINE Alu 118 296 -16 765 257 140 10 chr10 123997558 123997850 -16318915 - L1MEc LINE L1 -6027 369 40 4250 121 30 53 chr10 123997924 123998611 -16318154 - L1MC1 LINE L1 0 6333 5664 1961 156 0 0 chr10 123998611 123998893 -16317872 + AluSx SINE Alu 2 283 -29 4250 121 30 53 chr10 123998893 123998975 -16317790 - L1MC1 LINE L1 -669 5664 5582 1928 145 0 14 chr10 123998975 123999258 -16317507 + AluSx SINE Alu 1 279 -33 282 56 0 0 chr10 123999258 123999294 -16317471 + (CA)n Simple_repeat Simple_repeat 1 36 0 322 125 0 18 chr10 123999294 123999350 -16317415 - L1MC/D LINE L1 -697 5636 5582 2385 116 0 0 chr10 123999350 123999661 -16317104 + AluSx SINE Alu 1 311 -1 252 0 0 0 chr10 123999825 123999853 -16316912 + (TA)n Simple_repeat Simple_repeat 2 29 0 2590 221 7 27 chr10 123999888 124000448 -16316317 - MLT2B3 LTR ERVL -5 549 1 237 254 74 41 chr10 124000448 124000570 -16316195 - MLT1J LTR MaLR -52 459 334 895 185 37 6 chr10 124000584 124000746 -16316019 + MER5A DNA MER1_type 1 167 -22 257 245 20 75 chr10 124000865 124001012 -16315753 - MLT1J1 LTR MaLR -295 151 13 229 206 0 95 chr10 124001506 124001569 -16315196 + MIR SINE MIR 105 161 -101 373 261 54 0 chr10 124002139 124002231 -16314534 + MIR SINE MIR 162 258 -4 476 248 23 16 chr10 124002491 124002635 -16314130 - MIR SINE MIR -66 142 30 2387 90 3 0 chr10 124003008 124003307 -16313458 - AluY SINE Alu -11 300 1 3547 119 46 0 chr10 124003360 124003864 -16312901 + MER1A DNA MER1_type 1 527 0 664 167 52 57 chr10 124004107 124004266 -16312499 + MIR SINE MIR 49 214 -48 284 266 21 32 chr10 124004338 124004432 -16312333 + MER5B DNA MER1_type 1 93 -85 438 285 6 47 chr10 124004679 124004851 -16311914 + L2 LINE L2 2921 3085 -228 713 248 111 22 chr10 124004854 124005134 -16311631 + MLT1J LTR MaLR 5 278 -168 331 357 0 0 chr10 124005421 124005505 -16311260 + L2 LINE L2 3134 3217 -55 466 235 141 7 chr10 124005507 124005656 -16311109 + HsTC2 DNA Tc2 44 212 -1686 * 759 248 21 33 chr10 124005651 124005893 -16310872 + HsTC2 DNA Tc2 501 739 -1159 537 277 23 17 chr10 124005897 124006074 -16310691 + HsTC2 DNA Tc2 1284 1637 -261 2196 134 0 6 chr10 124006852 124007166 -16309599 + AluSx SINE Alu 1 312 0 281 301 59 47 chr10 124007180 124007416 -16309349 + L1MCc LINE L1 1284 1522 -4901 1623 145 12 0 chr10 124007442 124007691 -16309074 + AluSq SINE Alu 58 309 -4 1330 165 19 148 chr10 124007713 124007962 -16308803 + L1MC/D LINE L1 5134 5288 -1047 2508 74 0 0 chr10 124007962 124008260 -16308505 + AluY SINE Alu 1 298 -13 1330 165 19 148 chr10 124008260 124008531 -16308234 + L1MC/D LINE L1 5288 5592 -743 880 94 281 12 chr10 124008536 124008707 -16308058 - AluSg/x SINE Alu 0 309 93 1852 106 0 0 chr10 124008709 124008944 -16307821 - AluSq SINE Alu -78 235 1 606 49 0 0 chr10 124009372 124009454 -16307311 + (GA)n Simple_repeat Simple_repeat 2 83 0 2236 67 63 7 chr10 124010183 124010468 -16306297 - AluY SINE Alu -10 301 1 1813 162 0 58 chr10 124010473 124010800 -16305965 - AluSx SINE Alu -4 308 1 1998 242 32 19 chr10 124010872 124011462 -16305303 + L1M4 LINE L1 4505 5102 -1044 469 303 26 50 chr10 124011635 124011822 -16304943 + ERVL LTR ERVL 4505 4557 -439 2458 102 27 21 chr10 124011822 124012195 -16304570 + THE1C LTR MaLR 1 375 0 469 303 26 50 chr10 124012195 124012332 -16304433 + ERVL LTR ERVL 4557 4696 -300 424 313 153 57 chr10 124012584 124012814 -16303951 - HERV16 LTR ERVL -4688 308 45 1991 155 0 3 chr10 124012814 124013110 -16303655 - AluSx SINE Alu -17 295 1 424 313 153 57 chr10 124013110 124013160 -16303605 - HERV16 LTR ERVL -4951 45 1 403 314 77 14 chr10 124013164 124013435 -16303330 - LTR16B LTR ERVL -8 450 151 358 230 103 0 chr10 124015287 124015374 -16301391 + MIR SINE MIR 88 183 -79 415 298 18 58 chr10 124016354 124016484 -16300281 + MER5A DNA MER1_type 21 144 -45 1909 157 10 13 chr10 124016484 124016790 -16299975 + AluJb SINE Alu 1 305 -7 415 298 18 58 chr10 124016790 124016830 -16299935 + MER5A DNA MER1_type 144 184 -5 676 288 27 18 chr10 124016905 124017127 -16299638 - MIR SINE MIR -38 224 1 374 280 28 9 chr10 124017133 124017240 -16299525 - MIR SINE MIR -74 134 26 2226 134 0 0 chr10 124017526 124017825 -16298940 - AluSx SINE Alu -12 300 2 2105 127 0 22 chr10 124017974 124018288 -16298477 + AluSc SINE Alu 1 307 -2 206 118 0 29 chr10 124018828 124018862 -16297903 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 390 234 85 0 chr10 124018915 124019009 -16297756 - MIR SINE MIR -22 240 139 196 236 0 42 chr10 124019191 124019263 -16297502 - L2 LINE L2 -420 2893 2825 321 296 35 0 chr10 124019779 124019894 -16296871 - MLT1L LTR MaLR -1 614 496 228 151 57 38 chr10 124020204 124020257 -16296508 - MLT1L LTR MaLR -561 54 1 2100 107 52 3 chr10 124020335 124020625 -16296140 - AluSx SINE Alu -8 304 1 260 245 128 59 chr10 124020699 124020801 -16295964 - MIR SINE MIR -21 241 133 2137 130 10 16 chr10 124020977 124021285 -16295480 - AluSx SINE Alu -6 306 1 1005 126 14 0 chr10 124021285 124021428 -16295337 - AluSq/x SINE Alu -167 145 1 1729 133 70 37 chr10 124021449 124021749 -16295016 + AluJb SINE Alu 3 312 0 997 175 18 37 chr10 124021768 124021985 -16294780 - MER20 DNA MER1_type 0 219 7 955 202 22 22 chr10 124021996 124022179 -16294586 + MER5A DNA MER1_type 1 183 -6 631 289 38 0 chr10 124022184 124022343 -16294422 + MER5B DNA MER1_type 14 178 0 248 297 214 30 chr10 124022996 124023224 -16293541 + L2 LINE L2 2477 2662 -652 2086 132 0 14 chr10 124023224 124023520 -16293245 + AluSx SINE Alu 9 300 -12 1809 207 85 43 chr10 124023528 124024011 -16292754 - MLT1D LTR MaLR -2 503 1 248 297 214 30 chr10 124024011 124024137 -16292628 + L2 LINE L2 2667 2907 -407 423 260 72 77 chr10 124024140 124024321 -16292444 - MER91A DNA MER1_type -2 194 15 206 258 212 30 chr10 124024347 124024479 -16292286 + L2 LINE L2 2921 3076 -196 2183 134 0 0 chr10 124024479 124024777 -16291988 - AluSx SINE Alu -14 298 1 186 380 170 0 chr10 124024886 124024986 -16291779 + L2 LINE L2 3134 3250 -22 186 118 0 0 chr10 124024987 124025021 -16291744 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 382 314 39 19 chr10 124025576 124025732 -16291033 + MIR SINE MIR 16 174 -88 428 230 220 47 chr10 124025791 124025982 -16290783 - MIR SINE MIR -7 255 32 182 325 73 49 chr10 124026020 124026143 -16290622 + L2 LINE L2 3169 3294 -19 2203 128 0 0 chr10 124026192 124026489 -16290276 - AluSq SINE Alu -16 297 1 5481 218 33 18 chr10 124028230 124030398 -16286367 + L1M3f LINE L1 14 2217 -4066 1399 214 78 24 chr10 124030687 124031057 -16285708 + LTR16C LTR ERVL 85 474 -17 2230 116 17 3 chr10 124031161 124031462 -16285303 - AluSx SINE Alu -7 305 1 244 167 0 21 chr10 124031985 124032033 -16284732 - L2 LINE L2 -1 3271 3225 455 308 47 29 chr10 124032353 124032427 -16284338 - MER5B DNA MER1_type 0 178 107 1291 207 10 91 chr10 124032427 124032833 -16283932 - MLT1A2 LTR MaLR -1 373 1 455 308 47 29 chr10 124032833 124032930 -16283835 - MER5B DNA MER1_type -71 107 4 236 301 11 21 chr10 124033890 124033983 -16282782 - MIR3 SINE MIR -51 157 66 198 272 43 33 chr10 124035195 124035287 -16281478 + L2 LINE L2 3180 3272 0 311 306 65 0 chr10 124035594 124035702 -16281063 + MER69 DNA AcHobo 9 123 -2403 * 608 179 98 29 chr10 124035687 124035860 -16280905 + MER69 DNA AcHobo 2342 2526 0 633 172 176 118 chr10 124036033 124036312 -16280453 - MER51C LTR ERV1 0 640 346 380 211 0 0 chr10 124036762 124036838 -16279927 + MIR SINE MIR 152 227 -35 2379 77 0 29 chr10 124036866 124037176 -16279589 + AluY SINE Alu 1 301 -10 1856 149 37 3 chr10 124037199 124037494 -16279271 - AluJo SINE Alu -7 305 1 1013 104 0 8 chr10 124037496 124037630 -16279135 - AluJo/FLAM SINE Alu -179 133 1 1792 158 86 3 chr10 124038077 124038413 -16278352 + THE1B LTR MaLR 1 364 0 226 266 13 38 chr10 124038677 124038756 -16278009 - MER5B DNA MER1_type -73 105 29 338 292 18 35 chr10 124039457 124039570 -16277195 - L2 LINE L2 -4 3309 3199 410 239 94 0 chr10 124041383 124041500 -16275265 + L2 LINE L2 3144 3271 -1 398 266 186 27 chr10 124041690 124041878 -16274887 - MIR SINE MIR -26 236 19 2312 115 0 0 chr10 124042045 124042340 -16274425 + AluSx SINE Alu 1 295 -17 201 355 65 9 chr10 124042387 124042494 -16274271 + L2 LINE L2 3191 3303 -10 777 241 46 13 chr10 124042959 124043294 -16273471 - MER31B LTR ERV1 0 466 1 1211 193 137 28 chr10 124043354 124043711 -16273054 + MSTD LTR MaLR 1 396 0 762 199 0 0 chr10 124043893 124044024 -16272741 - FLAM_A SINE Alu -2 131 1 21 36 0 0 chr10 124044889 124044917 -16271848 + AT_rich Low_complexity Low_complexity 1 28 0 1505 208 28 14 chr10 124045235 124045591 -16271174 - MLT1A1 LTR MaLR 0 365 5 871 172 3 14 chr10 124045670 124046031 -16270734 + CT-rich Low_complexity Low_complexity 1 356 0 240 200 0 0 chr10 124046052 124046107 -16270658 + CT-rich Low_complexity Low_complexity 3 57 0 332 220 27 65 chr10 124046109 124046220 -16270545 - MLT2B3 LTR ERVL -223 297 200 1652 161 19 0 chr10 124046220 124046480 -16270285 - AluJo SINE Alu -22 290 26 843 208 40 5 chr10 124046751 124046953 -16269812 - MLT2B3 LTR ERVL -345 209 1 912 148 0 0 chr10 124047400 124047528 -16269237 + AluSc SINE Alu 167 294 -15 2275 103 19 27 chr10 124047540 124047907 -16268858 + THE1B LTR MaLR 1 364 0 323 298 30 23 chr10 124048637 124048768 -16267997 + MIR3 SINE MIR 51 182 -26 630 177 0 0 chr10 124048886 124048999 -16267766 + AluJb SINE Alu 200 312 0 259 292 161 47 chr10 124050119 124050355 -16266410 - L2 LINE L2 -19 3294 3032 275 221 112 91 chr10 124050428 124050704 -16266061 - L2 LINE L2 -215 3098 2817 181 361 57 46 chr10 124050826 124051089 -16265676 - L2 LINE L2 -449 2865 2600 1568 274 36 20 chr10 124051553 124052526 -16264239 - L1MEc LINE L1 -3426 2789 1845 258 32 0 0 chr10 124053377 124053408 -16263357 + (GA)n Simple_repeat Simple_repeat 2 32 0 204 40 0 0 chr10 124053918 124053943 -16262822 + (GA)n Simple_repeat Simple_repeat 2 26 0 496 371 34 7 chr10 124053946 124054240 -16262525 - L1ME LINE L1 -536 5626 5325 237 358 33 0 chr10 124054555 124054675 -16262090 - MIR SINE MIR -70 192 69 329 282 62 70 chr10 124055248 124055475 -16261290 + Charlie2 DNA MER1_type 98 322 -2540 1004 232 91 47 chr10 124055504 124055683 -16261082 + Charlie2 DNA MER1_type 2230 2400 -462 1816 161 14 4 chr10 124055683 124055962 -16260803 - AluJo SINE Alu -25 287 6 1310 114 0 31 chr10 124055967 124056194 -16260571 - L1PA16 LINE L1 -1 6165 5946 1004 232 91 47 chr10 124056194 124056599 -16260166 + Charlie2 DNA MER1_type 2403 2846 -16 363 215 86 21 chr10 124056764 124056857 -16259908 + L2 LINE L2 3213 3311 -2 663 251 88 4 chr10 124056861 124057088 -16259677 - MIR SINE MIR -8 254 9 33 43 0 0 chr10 124058455 124058502 -16258263 + GC_rich Low_complexity Low_complexity 1 47 0 2237 126 3 0 chr10 124060170 124060480 -16256285 - AluSx SINE Alu -1 311 1 2185 135 0 0 chr10 124061022 124061334 -16255431 - AluSx SINE Alu 0 312 1 222 293 241 8 chr10 124162047 124162180 -16154585 - MIR SINE MIR 0 262 99 679 192 60 39 chr10 124162582 124162764 -16154001 - MIR SINE MIR -6 256 71 473 229 15 15 chr10 124162797 124162928 -16153837 - L1ME1 LINE L1 -7 6159 6029 203 234 156 0 chr10 124162976 124163053 -16153712 - MIR SINE MIR -67 141 53 251 130 19 0 chr10 124165469 124165523 -16151242 + (TAA)n Simple_repeat Simple_repeat 3 57 0 295 260 0 0 chr10 124166311 124166388 -16150377 + (CA)n Simple_repeat Simple_repeat 1 77 0 645 238 0 0 chr10 124166399 124166903 -16149862 + (CA)n Simple_repeat Simple_repeat 1 504 0 355 306 50 19 chr10 124169059 124169219 -16147546 + L1MC5 LINE L1 7676 7840 -121 837 223 9 47 chr10 124169223 124169456 -16147309 - MLT1B LTR MaLR -3 387 164 758 160 0 0 chr10 124169459 124169590 -16147175 - FLAM_C SINE Alu 0 143 13 802 225 0 11 chr10 124169600 124169782 -16146983 - MLT1B LTR MaLR -210 180 1 305 167 141 26 chr10 124169782 124169860 -16146905 + L1MC5 LINE L1 7836 7922 -39 418 332 61 28 chr10 124169922 124170136 -16146629 + L3 LINE CR1 1338 1558 -19 409 312 54 59 chr10 124170136 124170357 -16146408 + L3 LINE CR1 958 1177 -400 261 319 67 14 chr10 124170473 124170683 -16146082 - L1MC4a LINE L1 -1898 5910 5690 2173 113 0 0 chr10 124170689 124170980 -16145785 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 124171080 124171104 -16145661 + (GGAA)n Simple_repeat Simple_repeat 3 26 0 2482 68 0 0 chr10 124172174 124172485 -16144280 - AluY SINE Alu 0 311 1 501 303 23 51 chr10 124173023 124173198 -16143567 + MER91A DNA MER1_type 25 194 -2 220 347 0 0 chr10 124179083 124179158 -16137607 + GA-rich Low_complexity Low_complexity 4 78 0 462 136 0 0 chr10 124181193 124181274 -16135491 + (TC)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 124186319 124186341 -16130424 + GC_rich Low_complexity Low_complexity 1 22 0 331 274 49 56 chr10 124186976 124187154 -16129611 + MIR SINE MIR 10 185 -67 1920 163 3 0 chr10 124187211 124187518 -16129247 - AluJb SINE Alu -4 308 1 720 252 210 51 chr10 124187637 124188066 -16128699 + LTR33A LTR ERVL 27 523 0 490 248 181 0 chr10 124188645 124188794 -16127971 - MER45A DNA AcHobo 0 178 3 428 244 118 20 chr10 124189370 124189546 -16127219 + MIR SINE MIR 1 188 -62 232 284 23 0 chr10 124189660 124189778 -16126987 + (TA)n Simple_repeat Simple_repeat 1 120 0 238 352 19 19 chr10 124190685 124190790 -16125975 + L2 LINE L2 3168 3272 0 561 253 56 12 chr10 124190834 124190996 -16125769 - MIR SINE MIR -5 257 89 308 331 95 0 chr10 124191020 124191168 -16125597 + MER5A DNA MER1_type 28 189 0 294 254 51 49 chr10 124191184 124191316 -16125449 + MER5A DNA MER1_type 8 132 -46 1662 159 52 17 chr10 124192066 124192356 -16124409 - AluJo SINE Alu -12 300 1 325 267 76 88 chr10 124192485 124192685 -16124080 + MIR SINE MIR 29 223 -39 485 191 16 56 chr10 124193030 124193156 -16123609 - MER63A DNA MER1_type -35 175 55 490 261 185 33 chr10 124193512 124193723 -16123042 + MIR SINE MIR 18 260 -2 214 333 128 8 chr10 124193777 124193894 -16122871 + L2 LINE L2 3141 3271 -1 942 257 86 13 chr10 124194043 124194346 -16122419 + LTR16A LTR ERVL 95 419 -31 1981 143 11 11 chr10 124194701 124194988 -16121777 + AluSx SINE Alu 7 293 -19 459 227 150 63 chr10 124195018 124195225 -16121540 - LTR16A1 LTR ERVL -55 402 178 386 249 30 83 chr10 124195687 124195856 -16120909 + MIR SINE MIR 48 207 -55 281 353 70 32 chr10 124196608 124196764 -16120001 + MIR SINE MIR 22 183 -79 188 167 111 0 chr10 124196880 124196916 -16119849 - MIR3 SINE MIR -52 156 117 279 299 62 10 chr10 124197337 124197434 -16119331 - MIR SINE MIR -3 259 158 234 305 16 35 chr10 124197426 124197537 -16119228 - MIR SINE MIR -96 112 6 * 258 276 129 35 chr10 124197533 124197649 -16119116 + MIR3 SINE MIR 66 192 -16 217 294 0 149 chr10 124198449 124198718 -16118047 + L2 LINE L2 3027 3255 -17 200 250 0 0 chr10 124199032 124199072 -16117693 + MIR SINE MIR 107 146 -116 376 202 133 42 chr10 124199339 124199457 -16117308 - MIR SINE MIR -61 147 70 315 104 0 0 chr10 124199861 124199909 -16116856 - MER53 DNA DNA -138 51 4 433 316 23 41 chr10 124200341 124200512 -16116253 - MIR3 SINE MIR -38 170 3 365 239 119 40 chr10 124200597 124200752 -16116013 - MIR SINE MIR -33 229 70 690 244 21 87 chr10 124201793 124202035 -16114730 + MIR SINE MIR 32 257 -5 254 167 0 15 chr10 124202641 124202707 -16114058 + (CA)n Simple_repeat Simple_repeat 1 65 0 733 311 117 16 chr10 124202812 124203188 -16113577 + L3 LINE CR1 1164 1577 0 2280 124 0 0 chr10 124203455 124203762 -16113003 - AluSx SINE Alu -5 307 1 566 195 32 49 chr10 124203807 124203930 -16112835 - FLAM_C SINE Alu -9 124 4 217 321 75 19 chr10 124204118 124204224 -16112541 + L2 LINE L2 3141 3252 -20 1945 136 7 17 chr10 124204231 124204525 -16112240 - AluJo SINE Alu -5 307 17 3213 88 23 5 chr10 124205583 124206026 -16110739 - L1PA10 LINE L1 -8 6160 5710 327 270 92 56 chr10 124206360 124206556 -16110209 + MLT1H LTR MaLR 118 320 -229 319 195 81 23 chr10 124206629 124206716 -16110049 + MLT1H LTR MaLR 458 549 0 222 292 15 0 chr10 124206754 124206819 -16109946 - L2 LINE L2 0 3272 3207 334 268 113 42 chr10 124207170 124207312 -16109453 - MIR SINE MIR -55 207 56 224 273 9 0 chr10 124207594 124207704 -16109061 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 241 254 0 0 chr10 124207704 124207759 -16109006 + (CAAT)n Simple_repeat Simple_repeat 3 57 0 611 328 104 43 chr10 124207867 124208150 -16108615 + L2 LINE L2 2455 2720 -593 2358 125 0 0 chr10 124208150 124208461 -16108304 + AluSq SINE Alu 1 311 -2 611 328 104 43 chr10 124208461 124208967 -16107798 + L2 LINE L2 2720 3294 -19 343 248 81 86 chr10 124210334 124210568 -16106197 - L1MC4a LINE L1 -1844 5964 5732 2007 172 39 27 chr10 124211501 124212051 -16104714 - MLT2A2 LTR ERVL 0 554 1 197 176 29 0 chr10 124212051 124212085 -16104680 + MIR SINE MIR 158 192 -70 839 134 28 37 chr10 124212994 124213201 -16103564 + L1M3 LINE L1 5503 5709 -474 421 279 101 0 chr10 124213237 124213366 -16103399 + MIR SINE MIR 121 262 0 1665 166 7 37 chr10 124213429 124213725 -16103040 - AluJo SINE Alu -8 304 18 3417 193 69 39 chr10 124213767 124214742 -16102023 + L1MC4 LINE L1 7039 8042 0 509 327 10 39 chr10 124214816 124215024 -16101741 - MIR SINE MIR -46 216 15 474 352 82 13 chr10 124215027 124215260 -16101505 - MIR SINE MIR -5 257 9 763 253 18 5 chr10 124216320 124216541 -16100224 - LTR33 LTR ERVL -7 514 291 235 323 108 0 chr10 124216793 124216886 -16099879 - MER91A DNA MER1_type -6 190 88 223 369 12 0 chr10 124216872 124216956 -16099809 - MER91A DNA MER1_type -38 158 74 * 272 213 52 66 chr10 124217010 124217146 -16099619 + MER112 DNA MER1_type 75 208 -52 394 286 121 29 chr10 124217345 124217551 -16099214 + MIR SINE MIR 38 262 0 353 319 69 98 chr10 124218051 124218368 -16098397 + L2 LINE L2 2964 3271 -1 1930 173 3 3 chr10 124218579 124218885 -16097880 - AluJb SINE Alu -6 306 1 390 300 88 58 chr10 124219010 124219407 -16097358 - L1ME4a LINE L1 -6 6115 5707 301 243 29 48 chr10 124220480 124220583 -16096182 + MIR3 SINE MIR 65 165 -43 1809 142 7 28 chr10 124222400 124222688 -16094077 + AluJo SINE Alu 1 282 -30 354 276 13 59 chr10 124222709 124222861 -16093904 - L1M4 LINE L1 -328 5850 5703 302 370 43 11 chr10 124224754 124224938 -16091827 + MIR SINE MIR 61 250 -12 753 294 101 13 chr10 124226180 124226557 -16090208 + MLT1K LTR MaLR 175 584 -4 433 83 14 14 chr10 124226965 124227037 -16089728 + (TTCC)n Simple_repeat Simple_repeat 1 72 0 2098 133 7 7 chr10 124227037 124227346 -16089419 - AluSc SINE Alu 0 309 1 411 247 27 34 chr10 124227734 124227880 -16088885 - MLT1K LTR MaLR -74 514 370 198 0 0 0 chr10 124228687 124228709 -16088056 + (CAA)n Simple_repeat Simple_repeat 2 23 0 245 222 200 22 chr10 124228820 124228910 -16087855 + MIR SINE MIR 43 148 -60 2104 98 39 14 chr10 124228991 124229276 -16087489 + AluSx SINE Alu 1 292 -20 31 0 0 0 chr10 124229276 124229307 -16087458 + AT_rich Low_complexity Low_complexity 1 31 0 306 267 100 0 chr10 124229522 124229643 -16087122 + MIR3 SINE MIR 40 177 -51 1941 104 12 0 chr10 124229692 124229993 -16086772 + AluSx SINE Alu 29 332 0 235 222 0 19 chr10 124230084 124230138 -16086627 + L2 LINE L2 3220 3272 0 288 263 57 39 chr10 124231476 124231631 -16085134 - MIR3 SINE MIR -16 192 30 237 170 0 0 chr10 124231934 124231981 -16084784 - Alu SINE Alu -1 301 255 266 225 122 70 chr10 124232050 124232263 -16084502 + MIR SINE MIR 28 251 -11 2418 192 29 6 chr10 124232576 124233087 -16083678 - L1MB3 LINE L1 0 6183 5661 794 68 40 23 chr10 124233092 124233269 -16083496 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 186 43 0 0 chr10 124233269 124233292 -16083473 + (CCTA)n Simple_repeat Simple_repeat 2 24 0 280 136 203 0 chr10 124233297 124233356 -16083409 - L1MB3 LINE L1 -665 5647 5577 515 289 159 10 chr10 124233704 124233912 -16082853 + MIR SINE MIR 5 243 -19 1379 239 4 111 chr10 124234764 124234776 -16081989 - L2 LINE L2 -6 3307 3295 2234 108 0 3 chr10 124234776 124235063 -16081702 - AluSx SINE Alu -15 297 12 1379 239 4 111 chr10 124235063 124235590 -16081175 - L2 LINE L2 -18 3295 2826 856 219 9 36 chr10 124235686 124235877 -16080888 + MER58A DNA MER1_type 2 188 -2232 1877 66 0 9 chr10 124235877 124236103 -16080662 - AluY SINE Alu -12 299 76 856 219 9 36 chr10 124236103 124236130 -16080635 + MER58A DNA MER1_type 188 214 -10 556 285 150 0 chr10 124236130 124236323 -16080442 + MIR SINE MIR 7 228 -34 228 311 14 0 chr10 124236395 124236469 -16080296 + MIR SINE MIR 80 154 -108 1342 103 15 0 chr10 124237507 124237702 -16079063 + L1PB1 LINE L1 5951 6148 -3 233 208 21 0 chr10 124238403 124238451 -16078314 + MIR SINE MIR 103 151 -111 1426 205 85 41 chr10 124239031 124239176 -16077589 + MLT1C LTR MaLR 6 143 -324 4281 94 4 2 chr10 124239176 124239729 -16077036 + MER41A LTR ERV1 1 554 0 1426 205 85 41 chr10 124239729 124240018 -16076747 + MLT1C LTR MaLR 143 459 -8 318 26 0 0 chr10 124240821 124240860 -16075905 + (TG)n Simple_repeat Simple_repeat 2 40 0 362 302 39 22 chr10 124241547 124241729 -16075036 - MIR SINE MIR -65 197 13 238 323 0 0 chr10 124241959 124242024 -16074741 + (CA)n Simple_repeat Simple_repeat 1 65 0 214 298 0 0 chr10 124242554 124242601 -16074164 + C-rich Low_complexity Low_complexity 4 50 0 295 221 0 35 chr10 124243289 124243375 -16073390 + MER5B DNA MER1_type 1 83 -95 180 268 0 0 chr10 124243395 124243436 -16073329 - MER5B DNA MER1_type -137 41 1 348 245 106 20 chr10 124243852 124244003 -16072762 - MIR SINE MIR -72 190 27 2155 245 105 43 chr10 124244467 124245312 -16071453 - L1ME3A LINE L1 -12 6158 5261 744 291 71 13 chr10 124245470 124245848 -16070917 - L1ME3A LINE L1 -946 5200 4801 1802 155 49 30 chr10 124246056 124246423 -16070342 - THE1C LTR MaLR -1 374 1 732 224 143 5 chr10 124246432 124246642 -16070123 - MIR SINE MIR -21 241 3 258 326 58 29 chr10 124246685 124246857 -16069908 + MIR3 SINE MIR 27 203 -5 267 224 47 109 chr10 124247471 124247663 -16069102 - L1ME4a LINE L1 -18 6103 5924 268 211 28 14 chr10 124247663 124247734 -16069031 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 2152 103 13 20 chr10 124247757 124248059 -16068706 - AluSq SINE Alu -13 300 1 252 309 48 24 chr10 124248436 124248562 -16068203 - MIR SINE MIR -113 149 21 2115 129 0 0 chr10 124249126 124249412 -16067353 + AluSx SINE Alu 1 286 -26 451 298 96 0 chr10 124249870 124250048 -16066717 - L1MC5 LINE L1 -54 7907 7713 383 229 36 50 chr10 124250279 124250419 -16066346 - MER113 DNA MER1_type? -77 444 307 216 191 43 0 chr10 124250449 124250496 -16066269 + CT-rich Low_complexity Low_complexity 4 52 0 1887 164 78 24 chr10 124250507 124251038 -16065727 - MLT2A2 LTR ERVL 0 554 1 453 217 53 63 chr10 124251038 124251243 -16065522 - MER113 DNA MER1_type? -240 281 79 406 253 72 30 chr10 124251296 124251462 -16065303 - L1ME4a LINE L1 -350 5771 5599 2246 117 3 0 chr10 124251790 124252098 -16064667 + AluSx SINE Alu 1 309 -3 354 320 0 15 chr10 124252346 124252505 -16064260 - MIR SINE MIR -61 147 44 250 249 40 49 chr10 124254634 124254750 -16062015 - MIR SINE MIR -90 118 3 230 359 28 0 chr10 124254886 124254992 -16061773 + MIR SINE MIR 34 142 -66 * 414 261 45 0 chr10 124254990 124255101 -16061664 - L2 LINE L2 0 3313 3198 949 273 141 16 chr10 124255406 124255776 -16060989 - LTR16C LTR ERVL 0 491 76 353 243 110 39 chr10 124255837 124256114 -16060651 + L2 LINE L2 2925 3291 -22 2235 116 3 16 chr10 124257629 124257940 -16058825 + AluSx SINE Alu 1 307 -5 196 215 0 25 chr10 124258125 124258204 -16058561 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 7298 220 89 30 chr10 124258360 124261632 -16055133 - L1MD3 LINE L1 -112 8678 5601 1983 114 36 0 chr10 124261632 124261913 -16054852 - AluSx SINE Alu -21 291 1 7298 220 89 30 chr10 124261913 124262331 -16054434 - L1MD3 LINE L1 -3189 5601 5209 1959 155 7 10 chr10 124262331 124262640 -16054125 - AluJb SINE Alu -4 308 1 7298 220 89 30 chr10 124262640 124263114 -16053651 - L1MD3 LINE L1 -3581 5209 4246 1340 205 22 29 chr10 124263115 124263416 -16053349 + AluJo SINE Alu 12 310 0 2225 229 33 12 chr10 124263417 124264089 -16052676 - L1MD3 LINE L1 -2692 4249 3564 833 199 35 12 chr10 124264136 124264307 -16052458 - AluJo SINE Alu -18 294 120 2851 254 68 36 chr10 124264308 124265872 -16050893 - L1MD3 LINE L1 -3386 3555 1990 518 277 5 27 chr10 124265911 124266095 -16050670 - L1MD3 LINE L1 -6219 204 25 597 296 58 22 chr10 124266120 124266293 -16050472 - L1ME LINE L1 -320 5801 5613 2234 121 0 6 chr10 124266293 124266607 -16050158 + AluSx SINE Alu 1 312 0 597 296 58 22 chr10 124266607 124266710 -16050055 - L1ME LINE L1 -508 5613 5515 243 0 0 0 chr10 124267686 124267713 -16049052 + (T)n Simple_repeat Simple_repeat 1 27 0 328 324 88 15 chr10 124268729 124268865 -16047900 - MIR3 SINE MIR -60 148 3 386 314 9 49 chr10 124269513 124269736 -16047029 + L1MC/D LINE L1 5563 5776 -2032 2861 246 68 18 chr10 124270869 124271704 -16045061 - L1MEc LINE L1 -5486 910 34 222 296 156 30 chr10 124273152 124273287 -16043478 + L2 LINE L2 3158 3309 -4 183 80 0 0 chr10 124274087 124274112 -16042653 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 124274841 124274862 -16041903 + AT_rich Low_complexity Low_complexity 1 21 0 569 205 90 26 chr10 124274937 124275093 -16041672 - MIR3 SINE MIR -6 202 37 942 221 108 101 chr10 124275115 124275541 -16041224 - MLT1H LTR MaLR -6 543 115 333 0 0 0 chr10 124275548 124275585 -16041180 + (GA)n Simple_repeat Simple_repeat 2 38 0 242 259 0 0 chr10 124276466 124276524 -16040241 - L2 LINE L2 -219 3053 2996 32 26 0 0 chr10 124277149 124277188 -16039577 + AT_rich Low_complexity Low_complexity 1 39 0 591 74 0 0 chr10 124277360 124277441 -16039324 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 264 59 0 0 chr10 124277482 124277516 -16039249 + (CAAT)n Simple_repeat Simple_repeat 3 36 0 848 230 84 44 chr10 124277552 124277848 -16038917 - HAL1b LINE L1 -198 1150 843 1250 235 88 80 chr10 124277878 124278618 -16038147 - HAL1b LINE L1 -596 752 7 329 256 50 8 chr10 124278723 124278844 -16037921 - L1MC4 LINE L1 -1 8041 7916 1880 169 3 3 chr10 124278959 124279266 -16037499 + AluJb SINE Alu 1 307 -5 2944 199 64 25 chr10 124279517 124280201 -16036564 - L1ME2 LINE L1 -10 6154 5444 1924 245 67 2 chr10 124280543 124281075 -16035690 - L1ME1 LINE L1 0 6166 5601 1923 177 0 0 chr10 124281556 124281861 -16034904 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 124281861 124281882 -16034883 + AT_rich Low_complexity Low_complexity 1 21 0 481 234 88 93 chr10 124282354 124282559 -16034206 - MER102a DNA MER1_type -1 329 126 2371 70 13 25 chr10 124282586 124282900 -16033865 - AluSg SINE Alu 0 310 1 542 214 0 10 chr10 124283455 124283558 -16033207 + MER58 DNA MER1_type 1 102 -113 306 70 0 0 chr10 124283575 124283618 -16033147 + MER58 DNA MER1_type 2365 2407 -13 317 214 143 0 chr10 124284381 124284479 -16032286 + MIR3 SINE MIR 49 160 -48 1195 209 5 5 chr10 124285207 124285422 -16031343 - MER58A DNA MER1_type -9 215 1 190 360 81 0 chr10 124285739 124285875 -16030890 - L3b LINE CR1 -324 1259 1113 418 270 40 71 chr10 124286174 124286426 -16030339 - L2 LINE L2 -182 3131 2888 654 211 54 24 chr10 124286562 124286728 -16030037 - MIR SINE MIR -71 191 21 2273 153 55 12 chr10 124286806 124287013 -16029752 - MSTB LTR MaLR -10 416 219 225 0 0 0 chr10 124287013 124287038 -16029727 + (GA)n Simple_repeat Simple_repeat 2 26 0 2273 153 55 12 chr10 124287038 124287229 -16029536 - MSTB LTR MaLR -207 219 1 340 312 186 17 chr10 124287265 124287496 -16029269 - L2 LINE L2 -86 3186 2917 538 268 98 0 chr10 124287677 124287841 -16028924 + MIR SINE MIR 33 212 -50 187 343 47 29 chr10 124287949 124288331 -16028434 - L2 LINE L2 -667 2647 2259 251 337 0 0 chr10 124288468 124288551 -16028214 - MIR SINE MIR -64 144 62 390 309 164 0 chr10 124289403 124289604 -16027161 - MIR SINE MIR -23 239 6 199 247 206 41 chr10 124290810 124290907 -16025858 - L2 LINE L2 0 3272 3160 2396 115 21 44 chr10 124291676 124292060 -16024705 - THE1C LTR MaLR 0 375 1 228 323 167 0 chr10 124292127 124292223 -16024542 - MIR SINE MIR -130 132 21 268 387 67 0 chr10 124293269 124293463 -16023302 + L2 LINE L2 2851 3057 -215 231 307 99 0 chr10 124293624 124293725 -16023040 + MIR3 SINE MIR 49 159 -49 656 269 31 0 chr10 124294588 124294748 -16022017 - MIR SINE MIR -78 184 20 207 100 0 0 chr10 124294887 124294917 -16021848 + (TG)n Simple_repeat Simple_repeat 1 30 0 212 95 71 0 chr10 124296228 124296270 -16020495 + A-rich Low_complexity Low_complexity 4 48 0 298 296 72 16 chr10 124296855 124296980 -16019785 - MIR SINE MIR -2 260 129 774 238 81 0 chr10 124296988 124297198 -16019567 - MIR SINE MIR -2 260 34 487 279 143 36 chr10 124297195 124297446 -16019319 + L2 LINE L2 2990 3267 -5 * 201 74 0 0 chr10 124297533 124297560 -16019205 + (T)n Simple_repeat Simple_repeat 1 27 0 381 314 115 16 chr10 124298094 124298285 -16018480 - MIR SINE MIR -52 210 1 389 294 96 68 chr10 124299093 124299487 -16017278 + MLT1I LTR MaLR 4 408 -1 388 240 205 47 chr10 124299536 124299794 -16016971 + L2 LINE L2 2972 3270 -43 253 241 111 37 chr10 124299805 124299913 -16016852 - MIR SINE MIR -72 136 21 636 228 67 19 chr10 124300051 124300240 -16016525 + MIR SINE MIR 45 246 -16 2182 84 0 0 chr10 124300240 124300524 -16016241 + AluSx SINE Alu 19 302 -10 415 269 66 24 chr10 124300767 124300934 -16015831 - MIR3 SINE MIR -25 183 10 1116 196 29 5 chr10 124300980 124301189 -16015576 + MER20 DNA MER1_type 1 214 -5 415 267 97 24 chr10 124301323 124301500 -16015265 - MIR SINE MIR -36 226 38 211 226 198 75 chr10 124302202 124302308 -16014457 - L2 LINE L2 -10 3303 3185 182 246 220 68 chr10 124302635 124302753 -16014012 - L2 LINE L2 -1 3271 3136 2256 85 3 0 chr10 124302883 124303176 -16013589 + AluSq SINE Alu 1 294 -19 563 299 151 27 chr10 124303196 124303494 -16013271 + L2 LINE L2 2938 3272 0 592 274 25 6 chr10 124303749 124303906 -16012859 - MER5B DNA MER1_type -12 166 7 243 283 9 28 chr10 124303942 124304048 -16012717 - MIR SINE MIR -57 151 48 2337 165 23 77 chr10 124304302 124304780 -16011985 + LTR32 LTR ERVL 20 471 0 312 27 0 0 chr10 124306315 124306352 -16010413 + (CA)n Simple_repeat Simple_repeat 1 37 0 443 165 33 22 chr10 124307300 124307391 -16009374 - MLT1K LTR MaLR 0 588 497 233 203 0 34 chr10 124308494 124308553 -16008212 + (TAA)n Simple_repeat Simple_repeat 1 57 0 355 290 244 6 chr10 124308563 124308739 -16008026 - MIR SINE MIR -14 248 31 522 227 73 31 chr10 124308740 124308956 -16007809 + L1MC4a LINE L1 5698 5924 -254 706 201 40 180 chr10 124309162 124309355 -16007410 + MIR SINE MIR 14 158 -104 713 180 135 45 chr10 124309355 124309555 -16007210 - MER20 DNA MER1_type 0 219 2 706 201 40 180 chr10 124309555 124309639 -16007126 + MIR SINE MIR 158 252 -10 200 355 20 26 chr10 124309711 124309863 -16006902 + MIR3 SINE MIR 8 158 -50 450 250 52 0 chr10 124310846 124310962 -16005803 - MIR3 SINE MIR -6 202 81 232 278 0 0 chr10 124310964 124311018 -16005747 + MIR SINE MIR 86 139 -123 270 288 136 8 chr10 124311546 124311664 -16005101 + MIR SINE MIR 2 134 -128 2086 133 0 0 chr10 124311667 124311967 -16004798 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 124312162 124312187 -16004578 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 718 314 35 24 chr10 124312227 124312600 -16004165 - L1ME3A LINE L1 -225 5945 5569 328 338 90 8 chr10 124312619 124312752 -16004013 + MIR SINE MIR 119 262 0 188 248 171 57 chr10 124313024 124313053 -16003712 + MER5A DNA MER1_type 49 73 -116 6081 106 18 18 chr10 124313053 124314138 -16002627 - L1PA14 LINE L1 -1 6160 5070 188 248 171 57 chr10 124314138 124314213 -16002552 + MER5A DNA MER1_type 73 165 -24 * 485 245 28 0 chr10 124314139 124314245 -16002520 - MER5A DNA MER1_type -77 112 4 22 0 0 0 chr10 124315059 124315081 -16001684 + AT_rich Low_complexity Low_complexity 1 22 0 211 339 45 36 chr10 124315497 124315609 -16001156 + MIR SINE MIR 28 140 -122 1277 207 7 48 chr10 124315873 124316168 -16000597 - AluJo SINE Alu -29 283 1 2258 159 10 23 chr10 124316228 124316601 -16000164 + MLT1B LTR MaLR 1 370 -20 1708 148 62 51 chr10 124316601 124316972 -15999793 + THE1C LTR MaLR 1 375 0 2258 159 10 23 chr10 124316972 124316993 -15999772 + MLT1B LTR MaLR 370 390 0 28 0 0 0 chr10 124318179 124318207 -15998558 + AT_rich Low_complexity Low_complexity 1 28 0 632 244 92 64 chr10 124318231 124318411 -15998354 + L1ME4a LINE L1 5590 5764 -357 1268 183 9 9 chr10 124318411 124318635 -15998130 + MER58A DNA MER1_type 1 224 0 632 244 92 64 chr10 124318635 124318686 -15998079 + L1ME4a LINE L1 5764 5812 -309 1951 116 0 42 chr10 124318686 124318997 -15997768 - AluSx SINE Alu -14 298 1 632 244 92 64 chr10 124318997 124319059 -15997706 + L1ME4a LINE L1 5812 5892 -229 441 284 52 38 chr10 124319203 124319414 -15997351 - MIR SINE MIR -8 254 41 310 224 0 0 chr10 124319417 124319484 -15997281 + L1ME4a LINE L1 5957 6023 -98 471 279 52 70 chr10 124319514 124319986 -15996779 - MLT1J LTR MaLR -19 492 30 2198 191 24 34 chr10 124320398 124320864 -15995901 + MLT1C LTR MaLR 6 466 -1 1686 134 74 0 chr10 124321238 124321522 -15995243 + AluSx SINE Alu 1 305 -7 205 184 26 0 chr10 124321824 124321862 -15994903 + MIR SINE MIR 56 94 -168 334 213 80 0 chr10 124323073 124323148 -15993617 + MER91A DNA MER1_type 113 193 -3 448 305 114 29 chr10 124323311 124323521 -15993244 - MIR SINE MIR -6 256 29 1687 255 71 70 chr10 124323632 124324362 -15992403 - L1ME3A LINE L1 -13 6157 5427 259 286 241 0 chr10 124324793 124324905 -15991860 + MIR SINE MIR 107 245 -17 672 224 75 0 chr10 124324909 124325070 -15991695 - MER96 DNA MER1_type -2 173 1 450 238 170 7 chr10 124325201 124325348 -15991417 - MER112 DNA MER1_type -89 171 1 770 242 31 6 chr10 124325543 124325748 -15991017 + MIR SINE MIR 18 226 -36 231 125 0 0 chr10 124326322 124326354 -15990411 + MSTC LTR MaLR 2 33 -395 * 1725 154 15 4 chr10 124326351 124326624 -15990141 + MSTC LTR MaLR 153 428 0 1592 130 8 0 chr10 124327456 124327710 -15989055 - L1MA7 LINE L1 0 6291 6036 357 286 76 8 chr10 124328018 124328137 -15988628 + MIR SINE MIR 28 154 -108 277 306 52 52 chr10 124328187 124328360 -15988405 - MLT1J LTR MaLR -42 469 297 436 210 32 0 chr10 124328401 124328525 -15988240 + (CAGAGA)n Simple_repeat Simple_repeat 5 132 0 227 268 0 0 chr10 124328563 124328619 -15988146 - MLT1J LTR MaLR -312 199 144 256 375 0 0 chr10 124328718 124328830 -15987935 + MIR SINE MIR 151 262 0 298 357 9 9 chr10 124329248 124329360 -15987405 + MIR SINE MIR 86 197 -65 3782 128 15 5 chr10 124329983 124330590 -15986175 + L1MA5A LINE L1 5684 6296 -1 2217 108 0 0 chr10 124330717 124331014 -15985751 - AluSx SINE Alu -15 297 1 424 276 24 41 chr10 124331160 124331283 -15985482 - MIR SINE MIR -113 149 29 1146 298 86 10 chr10 124331712 124332226 -15984539 + L1MC4a LINE L1 5330 5882 -1926 669 280 106 86 chr10 124332246 124332689 -15984076 + LTR16B LTR ERVL 1 452 -12 190 152 30 0 chr10 124332712 124332745 -15984020 - MER5A DNA MER1_type 0 189 156 846 218 45 0 chr10 124332750 124332929 -15983836 - MER5A DNA MER1_type -1 188 2 881 264 18 0 chr10 124333067 124333287 -15983478 + MIR SINE MIR 2 225 -37 49 32 0 0 chr10 124333605 124333668 -15983097 + AT_rich Low_complexity Low_complexity 1 63 0 5464 102 29 11 chr10 124333670 124334515 -15982250 - L1PB2 LINE L1 -21 6130 5267 386 238 0 0 chr10 124335472 124335552 -15981213 - MIR SINE MIR -119 143 64 405 356 28 11 chr10 124335601 124335781 -15980984 + MIR SINE MIR 55 237 -25 278 234 9 93 chr10 124335940 124336047 -15980718 + MLT1J LTR MaLR 94 191 -320 367 299 0 63 chr10 124336267 124336343 -15980422 + LTR67 LTR ERVL 422 488 -69 4037 61 0 15 chr10 124336343 124336865 -15979900 + L1PA8 LINE L1 5659 6172 0 367 299 0 63 chr10 124336865 124336915 -15979850 + LTR67 LTR ERVL 488 540 -17 202 304 174 0 chr10 124337504 124337596 -15979169 + MIR SINE MIR 152 259 -3 1472 239 53 33 chr10 124338387 124338848 -15977917 + MLT1J LTR MaLR 1 508 -3 348 206 0 78 chr10 124339357 124339459 -15977306 + L1MC4 LINE L1 6612 6705 -1337 301 216 11 45 chr10 124339459 124339547 -15977218 + (CATATA)n Simple_repeat Simple_repeat 6 90 0 22 0 0 0 chr10 124340151 124340173 -15976592 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 124342746 124342778 -15973987 + (A)n Simple_repeat Simple_repeat 1 32 0 216 326 84 0 chr10 124343665 124343760 -15973005 - MIR SINE MIR -67 195 93 282 235 0 0 chr10 124343938 124344019 -15972746 + (CA)n Simple_repeat Simple_repeat 1 81 0 802 235 50 55 chr10 124344021 124344259 -15972506 - MIR SINE MIR -17 245 9 356 292 29 15 chr10 124344276 124344413 -15972352 - L1ME4a LINE L1 -178 5943 5805 2084 103 39 3 chr10 124344945 124345255 -15971510 + L1PA10 LINE L1 5848 6168 0 2233 127 42 14 chr10 124345326 124345680 -15971085 - THE1B LTR MaLR 0 364 1 249 290 65 37 chr10 124345680 124345787 -15970978 - MIR SINE MIR -70 192 83 406 238 27 41 chr10 124345997 124346144 -15970621 - MER113 DNA MER1_type? -332 189 45 232 320 64 0 chr10 124346420 124346498 -15970267 + MIR SINE MIR 104 186 -76 185 281 101 22 chr10 124346663 124346752 -15970013 + MIR3 SINE MIR 62 157 -51 279 268 37 0 chr10 124346754 124346836 -15969929 + MER117 DNA MER1_type 32 116 -81 436 235 215 0 chr10 124347236 124347385 -15969380 - MER5A DNA MER1_type -2 187 7 305 331 27 18 chr10 124347418 124347586 -15969179 - MIR SINE MIR -56 152 25 27 49 0 0 chr10 124347790 124347831 -15968934 + AT_rich Low_complexity Low_complexity 1 41 0 437 265 73 15 chr10 124348004 124348140 -15968625 + MIR SINE MIR 100 243 -19 1707 217 57 73 chr10 124349017 124349575 -15967190 - MLT1H LTR MaLR 0 549 1 588 253 142 6 chr10 124349732 124349942 -15966823 + MIR SINE MIR 7 250 -12 607 181 138 88 chr10 124350434 124350525 -15966240 + MER3 DNA MER1_type 42 146 -63 1852 56 0 4 chr10 124350525 124350758 -15966007 - L1PA8 LINE L1 -1 6171 5940 607 181 138 88 chr10 124350758 124350826 -15965939 + MER3 DNA MER1_type 146 209 0 248 111 22 0 chr10 124352673 124352718 -15964047 + (CA)n Simple_repeat Simple_repeat 2 47 0 199 194 48 0 chr10 124353427 124353489 -15963276 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 29 70 0 0 chr10 124354265 124354322 -15962443 + AT_rich Low_complexity Low_complexity 1 57 0 549 261 101 19 chr10 124356531 124356738 -15960027 + MIR SINE MIR 31 254 -8 649 276 171 20 chr10 124356744 124357135 -15959630 + L2 LINE L2 2864 3313 0 198 219 141 0 chr10 124358024 124358088 -15958677 - L2 LINE L2 0 3272 3200 709 240 178 18 chr10 124358092 124358317 -15958448 - MIR SINE MIR 0 262 2 662 262 72 27 chr10 124358445 124358666 -15958099 - MIR SINE MIR -16 246 16 304 292 125 65 chr10 124358781 124358949 -15957816 + MIR SINE MIR 34 211 -51 202 343 154 6 chr10 124359233 124359402 -15957363 - MIR SINE MIR -35 227 34 1871 134 16 19 chr10 124359567 124359880 -15956885 - AluSx SINE Alu 0 312 1 470 284 161 7 chr10 124360518 124360736 -15956029 + MIR SINE MIR 12 256 -6 404 227 34 0 chr10 124360871 124360959 -15955806 + MIR SINE MIR 59 149 -113 1013 268 56 11 chr10 124361074 124361343 -15955422 + MLT1J1 LTR MaLR 7 287 -159 345 317 7 35 chr10 124362345 124362487 -15954278 - MIR SINE MIR -1 261 124 803 247 11 11 chr10 124362914 124363088 -15953677 + MIR SINE MIR 45 218 -44 2524 92 23 0 chr10 124363169 124363516 -15953249 - THE1A LTR MaLR 0 355 1 295 307 69 21 chr10 124363688 124363877 -15952888 - L2 LINE L2 -557 2757 2560 2199 100 0 7 chr10 124365321 124365621 -15951144 - AluSq SINE Alu -15 298 1 358 316 53 0 chr10 124365632 124365765 -15951000 - MIR3 SINE MIR -67 141 2 357 283 50 67 chr10 124365820 124366000 -15950765 + MIR SINE MIR 59 235 -27 622 270 28 28 chr10 124366414 124366592 -15950173 - MIR3 SINE MIR -26 182 5 560 228 95 25 chr10 124366769 124366927 -15949838 - MIR SINE MIR -38 224 56 1225 246 64 56 chr10 124367217 124367720 -15949045 - MLT1J LTR MaLR 0 511 5 512 286 41 14 chr10 124368138 124368285 -15948480 - MIR SINE MIR -51 211 61 346 321 87 33 chr10 124369857 124370156 -15946609 + L2 LINE L2 2932 3246 -26 36 0 0 0 chr10 124370157 124370193 -15946572 + AT_rich Low_complexity Low_complexity 1 36 0 2084 105 0 10 chr10 124370193 124370489 -15946276 - AluSx SINE Alu -19 293 1 23 0 0 0 chr10 124370965 124370988 -15945777 + AT_rich Low_complexity Low_complexity 1 23 0 224 297 89 0 chr10 124371960 124372061 -15944704 + L2 LINE L2 2990 3099 -173 671 265 140 56 chr10 124372159 124372267 -15944498 - L2 LINE L2 -2 3311 3213 1085 177 56 23 chr10 124372267 124372482 -15944283 + MER58A DNA MER1_type 1 222 -2 671 265 140 56 chr10 124372482 124372564 -15944201 - L2 LINE L2 -100 3213 3139 2185 102 0 22 chr10 124372564 124372878 -15943887 + AluSg SINE Alu 1 307 -3 671 265 140 56 chr10 124372878 124373150 -15943615 - L2 LINE L2 -174 3139 2809 1729 268 24 20 chr10 124373213 124373714 -15943051 + MER20B DNA MER1_type 104 606 -177 356 176 59 65 chr10 124373882 124374052 -15942713 + MER20B DNA MER1_type 570 738 -45 185 352 67 9 chr10 124374059 124374164 -15942601 - L2 LINE L2 -482 2832 2722 232 286 71 0 chr10 124374317 124374387 -15942378 - MIR SINE MIR -98 164 90 462 18 0 0 chr10 124374420 124374475 -15942290 + (TG)n Simple_repeat Simple_repeat 1 55 0 268 330 35 31 chr10 124374998 124375212 -15941553 - MIR SINE MIR -3 259 44 420 208 10 0 chr10 124375706 124375807 -15940958 - L1MB3 LINE L1 0 6183 6082 618 319 148 24 chr10 124376915 124377367 -15939398 + L2 LINE L2 2806 3313 0 2320 86 0 10 chr10 124377571 124377885 -15938880 + AluSq SINE Alu 1 311 -2 194 243 0 0 chr10 124378859 124378896 -15937869 + L2 LINE L2 3191 3227 -45 620 302 43 30 chr10 124379096 124379181 -15937584 + MIR SINE MIR 15 97 -165 2356 87 0 3 chr10 124379181 124379490 -15937275 - AluSx SINE Alu -4 308 1 620 302 43 30 chr10 124379490 124379639 -15937126 + MIR SINE MIR 97 252 -10 1433 121 28 0 chr10 124379654 124379869 -15936896 - AluSg/x SINE Alu -1 311 91 273 242 0 110 chr10 124379944 124380035 -15936730 - L2 LINE L2 -3 3310 3230 1394 113 13 4 chr10 124380074 124380449 -15936316 - MSTA LTR MaLR 0 428 1 479 331 6 6 chr10 124382016 124382188 -15934577 + MIR SINE MIR 77 248 -14 397 228 9 97 chr10 124382179 124382293 -15934472 + L3 LINE CR1 1362 1465 -112 * 422 169 26 13 chr10 124382355 124382432 -15934333 - MER5A DNA MER1_type -80 109 32 756 174 214 6 chr10 124382533 124382805 -15933960 + MER33 DNA MER1_type 5 363 0 710 319 29 0 chr10 124383501 124383708 -15933057 + MIR SINE MIR 50 262 0 326 329 66 20 chr10 124384622 124384774 -15931991 + MIR SINE MIR 17 175 -87 419 296 69 83 chr10 124384835 124385197 -15931568 + L2 LINE L2 2944 3300 -13 231 289 104 52 chr10 124385193 124385366 -15931399 + MIR SINE MIR 77 258 -4 * 35 24 0 0 chr10 124385869 124385911 -15930854 + AT_rich Low_complexity Low_complexity 1 42 0 212 298 36 0 chr10 124386085 124386169 -15930596 + MIR3 SINE MIR 69 155 -53 415 279 54 54 chr10 124387311 124387515 -15929250 + MIR SINE MIR 12 215 -47 611 277 96 45 chr10 124388100 124388536 -15928229 - L1ME4a LINE L1 0 6121 5709 1768 139 15 0 chr10 124388536 124388810 -15927955 + AluSx SINE Alu 1 278 -34 183 80 0 0 chr10 124388812 124388837 -15927928 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 611 277 96 45 chr10 124388837 124388957 -15927808 - L1ME4a LINE L1 -412 5709 5533 384 245 43 58 chr10 124389141 124389280 -15927485 - L1ME2 LINE L1 -7 6163 6026 287 169 56 0 chr10 124389349 124389438 -15927327 + (TA)n Simple_repeat Simple_repeat 2 95 0 996 243 29 50 chr10 124389438 124389923 -15926842 + L1ME3A LINE L1 4311 4785 -1361 * 2078 230 90 23 chr10 124389897 124390661 -15926104 + L1ME3A LINE L1 5300 6158 -6 449 315 87 57 chr10 124390745 124391183 -15925582 - HAL1 LINE L1 -1042 1465 1015 240 346 118 33 chr10 124391381 124391687 -15925078 - L2 LINE L2 -18 3295 2964 822 198 94 5 chr10 124393590 124393782 -15922983 + MER3 DNA MER1_type 1 209 0 2554 161 27 8 chr10 124395677 124396155 -15920610 - L1MB4 LINE L1 -1 6179 5693 451 253 32 89 chr10 124396218 124396376 -15920389 + MER5B DNA MER1_type 1 149 -29 215 172 35 126 chr10 124397273 124397360 -15919405 + MIR SINE MIR 76 154 -108 572 338 10 10 chr10 124397369 124397567 -15919198 + MLT1K LTR MaLR 1 198 -390 327 208 10 69 chr10 124397760 124397861 -15918904 + MLT1K LTR MaLR 478 572 -16 258 247 94 24 chr10 124397861 124397946 -15918819 + MIR SINE MIR 160 250 -12 331 219 82 0 chr10 124398409 124398482 -15918283 + MIR SINE MIR 75 153 -109 2243 82 7 0 chr10 124398581 124398875 -15917890 - AluY SINE Alu -15 296 1 674 311 84 35 chr10 124399012 124399382 -15917383 - L2 LINE L2 -5 3308 2921 890 295 51 15 chr10 124399564 124399896 -15916869 + MLT1I LTR MaLR 40 383 -26 297 322 34 87 chr10 124400517 124400781 -15915984 + L2 LINE L2 3018 3267 -5 219 69 0 0 chr10 124400822 124400851 -15915914 + (T)n Simple_repeat Simple_repeat 1 29 0 432 261 42 21 chr10 124400912 124401076 -15915689 - MIR SINE MIR -26 182 13 261 308 147 50 chr10 124401453 124401651 -15915114 + L2 LINE L2 3014 3230 -83 620 211 12 0 chr10 124401651 124401822 -15914943 + (TCCA)n Simple_repeat Simple_repeat 1 173 0 420 118 0 0 chr10 124401866 124401934 -15914831 + (TCCA)n Simple_repeat Simple_repeat 2 69 0 604 235 68 56 chr10 124401942 124402176 -15914589 - L2 LINE L2 0 3313 3077 189 364 0 0 chr10 124402354 124402420 -15914345 + L2 LINE L2 3245 3310 -3 183 414 9 17 chr10 124403963 124404079 -15912686 + L3b LINE CR1 1342 1456 -127 925 155 0 26 chr10 124404433 124404588 -15912177 - AluSg/x SINE Alu -26 286 136 2322 65 7 10 chr10 124404597 124404905 -15911860 - AluSq SINE Alu -6 307 1 874 181 0 6 chr10 124406669 124406829 -15909936 - AluJb SINE Alu -20 292 134 238 285 96 89 chr10 124406831 124406909 -15909856 - L1MC/D LINE L1 -1897 5911 5835 1861 132 50 4 chr10 124406909 124407190 -15909575 + AluSx SINE Alu 1 294 -18 238 285 96 89 chr10 124407190 124407402 -15909363 - L1MC/D LINE L1 -1973 5835 5619 1886 71 8 4 chr10 124408114 124408366 -15908399 + L1PA7 LINE L1 5902 6154 0 1470 214 0 7 chr10 124408562 124408837 -15907928 - MLT1A1 LTR MaLR -56 309 37 2027 102 0 3 chr10 124408847 124409130 -15907635 + AluSq SINE Alu 11 292 -21 245 128 213 0 chr10 124409133 124409180 -15907585 - MLT1A1 LTR MaLR -308 57 1 434 298 65 24 chr10 124409458 124409626 -15907139 + MIR3 SINE MIR 20 194 -14 21 36 0 0 chr10 124409630 124409658 -15907107 + AT_rich Low_complexity Low_complexity 1 28 0 345 307 52 33 chr10 124409905 124410058 -15906707 - L1ME LINE L1 -356 5765 5610 592 232 32 13 chr10 124411038 124411193 -15905572 - MIR SINE MIR -47 215 58 206 340 47 0 chr10 124412213 124412319 -15904446 - MIR SINE MIR -34 228 118 343 325 91 39 chr10 124413579 124413956 -15902809 - L2 LINE L2 -119 3153 2625 217 125 75 0 chr10 124414376 124414416 -15902349 - MER91 DNA MER1_type 0 140 98 575 270 51 6 chr10 124414553 124414731 -15902034 - MIR SINE MIR -10 252 67 227 329 112 13 chr10 124415556 124415708 -15901057 - MIR SINE MIR -28 234 68 342 312 72 0 chr10 124419361 124419486 -15897279 - MIR3 SINE MIR 0 208 75 988 183 104 20 chr10 124419607 124419647 -15897118 - MER20 DNA MER1_type 0 219 184 2015 130 0 10 chr10 124419647 124419955 -15896810 - AluSx SINE Alu -7 305 1 988 183 104 20 chr10 124419955 124420116 -15896649 - MER20 DNA MER1_type -35 184 1 460 227 108 40 chr10 124420163 124420339 -15896426 - MIR SINE MIR 0 262 75 405 0 0 0 chr10 124421182 124421227 -15895538 + (TG)n Simple_repeat Simple_repeat 2 46 0 332 280 11 43 chr10 124421291 124421384 -15895381 + L1MC4 LINE L1 6614 6703 -1339 264 122 0 0 chr10 124421965 124422006 -15894759 + (GA)n Simple_repeat Simple_repeat 1 41 0 219 356 17 26 chr10 124422152 124422267 -15894498 - MIR SINE MIR -79 129 16 243 326 38 30 chr10 124423392 124423524 -15893241 - L2 LINE L2 -195 3077 2945 2875 102 19 21 chr10 124423556 124423646 -15893119 + MER57B LTR ERV1 6 95 -339 2043 121 0 9 chr10 124423646 124423961 -15892804 + AluSx SINE Alu 1 312 0 2875 102 19 21 chr10 124423961 124424300 -15892465 + MER57B LTR ERV1 95 434 0 272 262 57 57 chr10 124425342 124425464 -15891301 - MIR SINE MIR -78 184 63 186 211 221 32 chr10 124427548 124427643 -15889122 + MIR3 SINE MIR 59 171 -37 387 306 91 35 chr10 124427658 124427857 -15888908 + L2 LINE L2 3063 3272 0 367 242 22 11 chr10 124427942 124428033 -15888732 - MER45 DNA AcHobo -948 92 1 1757 192 0 84 chr10 124428060 124428477 -15888288 - MLT1B LTR MaLR -8 382 1 231 114 0 0 chr10 124429573 124429608 -15887157 + (TG)n Simple_repeat Simple_repeat 1 35 0 945 196 5 0 chr10 124430289 124430478 -15886287 + L1MC4 LINE L1 7434 7623 -419 386 262 109 45 chr10 124430486 124430707 -15886058 + L1MC4 LINE L1 7808 8042 0 310 204 51 108 chr10 124430709 124430773 -15885992 - L1ME4a LINE L1 -15 6106 6040 2817 85 0 6 chr10 124430773 124431139 -15885626 + THE1B LTR MaLR 1 364 0 310 204 51 108 chr10 124431139 124431231 -15885534 - L1ME4a LINE L1 -81 6040 5959 603 173 200 0 chr10 124431605 124431755 -15885010 - MER20 DNA MER1_type -3 216 37 7771 27 6 0 chr10 124432152 124433147 -15883618 + L1PA3 LINE L1 5155 6152 -3 1080 241 79 29 chr10 124433166 124433562 -15883203 + MLT1J2 LTR MaLR 1 409 0 339 310 75 37 chr10 124433676 124433863 -15882902 + L2 LINE L2 2919 3112 -160 1729 181 0 0 chr10 124434182 124434485 -15882280 - AluJb SINE Alu -9 303 1 623 259 76 15 chr10 124435482 124435679 -15881086 + MIR SINE MIR 54 262 0 489 311 137 9 chr10 124436601 124436820 -15879945 - MIR SINE MIR 0 262 16 2286 139 86 2 chr10 124436876 124437271 -15879494 + MSTA LTR MaLR 1 428 0 2198 75 7 0 chr10 124437424 124437745 -15879020 - AluSp SINE Alu 0 324 2 539 333 51 5 chr10 124438300 124438516 -15878249 - MIR SINE MIR -13 249 24 180 300 30 30 chr10 124438840 124438940 -15877825 - L2 LINE L2 -183 3089 2990 357 120 11 141 chr10 124439156 124439248 -15877517 + MIR SINE MIR 110 189 -73 210 314 100 0 chr10 124439562 124439632 -15877133 + MIR SINE MIR 55 131 -77 228 290 0 29 chr10 124439735 124439804 -15876961 + CT-rich Low_complexity Low_complexity 3 69 0 636 289 130 23 chr10 124440286 124440406 -15876359 - L2 LINE L2 -1 3312 3206 279 0 0 0 chr10 124440406 124440437 -15876328 + (CA)n Simple_repeat Simple_repeat 2 32 0 636 289 130 23 chr10 124440437 124440827 -15875938 - L2 LINE L2 -107 3206 2718 188 35 35 0 chr10 124442414 124442443 -15874322 + (TG)n Simple_repeat Simple_repeat 2 31 0 1876 229 44 45 chr10 124442690 124443252 -15873513 + L1ME LINE L1 4783 5338 -828 2277 96 3 0 chr10 124443252 124443555 -15873210 + AluSg SINE Alu 1 304 -6 1876 229 44 45 chr10 124443555 124444012 -15872753 + L1ME LINE L1 5338 5794 -372 1352 206 146 56 chr10 124444037 124444481 -15872284 + L1MD3 LINE L1 7472 7964 -31 1846 165 3 10 chr10 124444481 124444784 -15871981 - AluJo SINE Alu -11 301 1 1352 206 146 56 chr10 124444784 124444820 -15871945 + L1MD3 LINE L1 7964 7995 0 224 233 0 0 chr10 124444826 124444869 -15871896 + MIR SINE MIR 220 262 0 312 306 10 10 chr10 124444979 124445077 -15871688 - MIR3 SINE MIR -5 203 106 693 260 87 0 chr10 124445166 124445339 -15871426 - MIR SINE MIR -28 234 47 2738 130 42 2 chr10 124445383 124445784 -15870981 + MER1A DNA MER1_type 1 417 -112 22 0 0 0 chr10 124447055 124447077 -15869688 + AT_rich Low_complexity Low_complexity 1 22 0 449 352 43 9 chr10 124447494 124447724 -15869041 - MIR SINE MIR -12 250 13 269 311 29 48 chr10 124447783 124447886 -15868879 + L2 LINE L2 3172 3272 0 292 275 22 22 chr10 124447922 124448013 -15868752 + MIR SINE MIR 165 255 -7 380 164 63 19 chr10 124448243 124448402 -15868363 + (TA)n Simple_repeat Simple_repeat 1 166 0 530 267 80 38 chr10 124450556 124450818 -15865947 + L1ME4a LINE L1 5597 5869 -252 1014 195 16 5 chr10 124452688 124452873 -15863892 + MER5A DNA MER1_type 1 187 -2 940 188 0 0 chr10 124453267 124453421 -15863344 + AluJb SINE Alu 140 293 -19 632 238 0 0 chr10 124453713 124453835 -15862930 - MER5B DNA MER1_type 0 178 57 294 29 0 0 chr10 124453839 124453874 -15862891 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 43657 31 22 1 chr10 124453880 124459880 -15856885 - L1PA2 LINE L1 -2 6153 24 352 250 0 28 chr10 124459947 124460055 -15856710 - MER5A DNA MER1_type -84 105 1 474 203 45 38 chr10 124460722 124460855 -15855910 + MIR SINE MIR 65 198 -64 417 191 12 33 chr10 124460953 124461069 -15855696 - MIR3 SINE MIR -21 187 74 303 324 63 0 chr10 124461238 124461380 -15855385 - MER117 DNA MER1_type 0 197 47 363 221 99 46 chr10 124461527 124461658 -15855107 - MLT1J2 LTR MaLR -309 141 4 730 101 0 0 chr10 124462060 124462180 -15854585 - AluSx SINE Alu 0 313 194 906 117 102 0 chr10 124462181 124462309 -15854456 - AluSx SINE Alu -172 141 1 263 279 67 29 chr10 124463310 124463414 -15853351 - MIR SINE MIR -102 160 53 227 225 0 0 chr10 124463429 124463469 -15853296 - MLT1L LTR MaLR -228 387 348 * 331 226 124 21 chr10 124463436 124463624 -15853141 - MLT1J1 LTR MaLR -212 299 4 241 211 0 0 chr10 124464274 124464312 -15852453 + MER1A DNA MER1_type 1 38 -489 * 2456 128 0 45 chr10 124464300 124464393 -15852372 + MER1A DNA MER1_type 165 261 -2441 1947 123 0 0 chr10 124464393 124464654 -15852111 - AluSx SINE Alu -22 290 30 2456 128 0 45 chr10 124464654 124464942 -15851823 + MER1A DNA MER1_type 261 529 0 218 240 57 14 chr10 124465343 124465413 -15851352 + MIR SINE MIR 78 151 -57 269 286 50 17 chr10 124465427 124465546 -15851219 - MIR SINE MIR 0 262 140 422 156 39 0 chr10 124465555 124465632 -15851133 - MLT1H LTR MaLR 0 549 470 880 144 8 0 chr10 124465638 124465770 -15850995 - AluSq/x SINE Alu -180 133 1 387 281 202 17 chr10 124466580 124466758 -15850007 - MIR SINE MIR 0 262 52 315 304 60 40 chr10 124466992 124467193 -15849572 - L1M4 LINE L1 -1147 4999 4795 253 172 31 0 chr10 124467248 124467312 -15849453 + (TA)n Simple_repeat Simple_repeat 1 66 0 390 288 48 53 chr10 124467356 124467713 -15849052 - L1M4 LINE L1 -1441 4705 4337 6790 54 0 0 chr10 124468285 124469064 -15847701 + L1PA7 LINE L1 5358 6136 -18 1112 83 11 17 chr10 124469066 124469105 -15847660 + (GAAA)n Simple_repeat Simple_repeat 1 218 0 1112 83 11 17 chr10 124469105 124469286 -15847479 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 305 228 22 76 chr10 124469755 124469847 -15846918 + L2 LINE L2 3227 3313 0 705 249 65 20 chr10 124470045 124470290 -15846475 + MIR SINE MIR 5 260 -2 288 254 129 6 chr10 124470368 124470544 -15846221 + L1ME3A LINE L1 5951 6161 -9 421 221 168 15 chr10 124472665 124472796 -15843969 + MER5B DNA MER1_type 1 151 -27 587 188 86 30 chr10 124472843 124472908 -15843857 - MER5A DNA MER1_type 0 189 129 1935 151 20 3 chr10 124472908 124473200 -15843565 + AluJb SINE Alu 1 297 -15 587 188 86 30 chr10 124473200 124473307 -15843458 - MER5A DNA MER1_type -60 129 6 191 278 33 44 chr10 124473406 124473496 -15843269 + MIR SINE MIR 63 151 -57 16157 124 33 8 chr10 124475832 124478190 -15838575 - Tigger1 DNA MER2_type 0 2418 1 668 168 28 28 chr10 124478323 124478466 -15838299 - MIR SINE MIR -12 250 108 438 214 0 87 chr10 124478498 124478624 -15838141 + MIR SINE MIR 39 153 -109 424 291 29 62 chr10 124478890 124479100 -15837665 + MLT1K LTR MaLR 373 575 -13 530 75 12 0 chr10 124479213 124479293 -15837472 + (TCCA)n Simple_repeat Simple_repeat 1 81 0 466 31 0 31 chr10 124479536 124479600 -15837165 + L1PA4 LINE L1 6093 6154 -1 231 249 21 93 chr10 124530405 124530502 -15786263 - MIR SINE MIR -56 152 101 849 276 29 4 chr10 124531921 124532160 -15784605 - MIR SINE MIR -6 256 12 2189 112 3 0 chr10 124533641 124533945 -15782820 - AluSp SINE Alu -8 305 1 632 239 18 6 chr10 124534576 124534739 -15782026 + MIR SINE MIR 21 185 -77 250 312 135 42 chr10 124534928 124535380 -15781385 + L2 LINE L2 2262 2755 -559 211 313 25 0 chr10 124535407 124535487 -15781278 - L2 LINE L2 0 3313 3232 266 325 56 40 chr10 124536058 124536184 -15780581 + L2 LINE L2 3127 3254 -18 333 68 0 0 chr10 124536906 124536950 -15779815 + (T)n Simple_repeat Simple_repeat 1 44 0 333 118 0 0 chr10 124537343 124537394 -15779371 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 1710 162 35 3 chr10 124537937 124538221 -15778544 + AluJo SINE Alu 1 293 -19 451 236 172 19 chr10 124538309 124538466 -15778299 - MER5A DNA MER1_type 0 189 9 670 223 71 125 chr10 124538728 124538796 -15777969 + MER58A DNA MER1_type 1 71 -2349 1919 121 48 0 chr10 124538796 124539069 -15777696 + AluSx SINE Alu 1 286 -26 210 37 0 0 chr10 124539069 124539096 -15777669 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1904 159 14 0 chr10 124539104 124539399 -15777366 + AluJo SINE Alu 1 299 -13 670 223 71 125 chr10 124539399 124539544 -15777221 + MER58A DNA MER1_type 77 212 -12 245 130 185 109 chr10 124539604 124539696 -15777069 + MIR SINE MIR 75 173 -89 634 244 68 68 chr10 124540349 124540599 -15776166 + Charlie8 DNA MER1_type 38 287 -2130 744 238 6 6 chr10 124540683 124540864 -15775901 + MIR SINE MIR 68 248 -14 268 292 100 23 chr10 124543235 124543365 -15773400 + L2 LINE L2 3169 3308 -5 267 343 74 37 chr10 124543414 124543711 -15773054 + L2 LINE L2 2923 3230 -42 377 258 23 23 chr10 124543913 124544041 -15772724 - MIR SINE MIR -115 147 20 1994 139 7 10 chr10 124544734 124545044 -15771721 + AluJo SINE Alu 1 309 -3 2730 132 9 59 chr10 124545609 124546064 -15770701 - Tigger2a DNA MER2_type -2 432 1 25 51 0 0 chr10 124546176 124546215 -15770550 + AT_rich Low_complexity Low_complexity 1 39 0 489 195 49 32 chr10 124546376 124546499 -15770266 - L2 LINE L2 0 3313 3189 1293 227 73 49 chr10 124546529 124546957 -15769808 - MLT1C LTR MaLR -1 466 25 2265 137 30 33 chr10 124546957 124547322 -15769443 - THE1B LTR MaLR 0 364 1 1293 227 73 49 chr10 124547322 124547343 -15769422 - MLT1C LTR MaLR -442 25 6 216 0 0 0 chr10 124548295 124548319 -15768446 + (T)n Simple_repeat Simple_repeat 1 24 0 405 171 0 14 chr10 124549409 124549479 -15767286 - L2 LINE L2 0 3313 3245 274 247 104 0 chr10 124549756 124549833 -15766932 + LTR67 LTR ERVL 42 126 -431 309 208 194 42 chr10 124550698 124550842 -15765923 - L2 LINE L2 -1831 1483 1318 246 32 0 0 chr10 124550890 124550921 -15765844 + (CA)n Simple_repeat Simple_repeat 2 32 0 398 202 87 46 chr10 124551780 124551953 -15764812 + L1ME4a LINE L1 5942 6121 0 21 0 0 0 chr10 124551955 124551976 -15764789 + AT_rich Low_complexity Low_complexity 1 21 0 907 273 93 35 chr10 124553532 124553909 -15762856 + MLT1I LTR MaLR 1 399 -10 519 261 0 9 chr10 124554618 124554729 -15762036 + MER5B DNA MER1_type 1 110 -68 1059 252 37 24 chr10 124554943 124555276 -15761489 - MLT1E3 LTR MaLR 0 613 294 1471 198 125 26 chr10 124555299 124555681 -15761084 - MER21B LTR ERV1 -2 603 418 645 203 78 152 chr10 124555763 124556019 -15760746 - MER21B LTR ERV1 -615 248 12 858 186 94 36 chr10 124556040 124556290 -15760475 - MLT1E1 LTR MaLR -294 360 57 458 171 0 57 chr10 124557884 124557972 -15758793 + L1ME LINE L1 5566 5648 -473 1075 168 5 35 chr10 124557974 124558171 -15758594 + AluJo SINE Alu 1 191 -121 996 223 16 11 chr10 124558171 124558359 -15758406 + AluJo SINE Alu 95 283 -29 2234 108 0 26 chr10 124558924 124559229 -15757536 + AluSg SINE Alu 2 298 -12 402 264 115 48 chr10 124559666 124559874 -15756891 + HAL1b LINE L1 70 291 -1057 5478 152 8 18 chr10 124559943 124560879 -15755886 + L1MA6 LINE L1 5373 6298 -2 489 42 83 0 chr10 124560880 124560952 -15755813 + Tigger3(Golem) DNA MER2_type 199 276 -2753 928 264 157 26 chr10 124560954 124561564 -15755201 + HAL1b LINE L1 339 1028 -320 964 221 94 4 chr10 124561690 124561934 -15754831 + L1MD3 LINE L1 7730 7995 0 408 282 53 18 chr10 124561924 124562094 -15754671 + HAL1b LINE L1 1142 1317 -31 * 2480 128 22 6 chr10 124562122 124562480 -15754285 + THE1B LTR MaLR 1 364 0 304 297 143 11 chr10 124562599 124562774 -15753991 + L1ME4a LINE L1 5924 6121 0 237 220 68 0 chr10 124563657 124563716 -15753049 - MIR SINE MIR -93 169 107 1384 285 124 21 chr10 124564264 124564987 -15751778 + L2 LINE L2 1725 2522 -792 293 24 49 0 chr10 124565087 124565128 -15751637 + (TCTCC)n Simple_repeat Simple_repeat 3 45 0 333 225 0 0 chr10 124565159 124565248 -15751517 + CT-rich Low_complexity Low_complexity 3 91 0 221 319 185 24 chr10 124566020 124566300 -15750465 + L2 LINE L2 2706 3017 -255 368 350 45 6 chr10 124566833 124566990 -15749775 + MIR SINE MIR 97 259 -3 192 263 35 0 chr10 124567067 124567124 -15749641 - L2 LINE L2 -1 3312 3254 1565 223 3 0 chr10 124567975 124568284 -15748481 + AluJo SINE Alu 1 310 -2 1576 182 10 47 chr10 124569076 124569552 -15747213 + AluJb SINE Alu 2 466 0 183 80 0 0 chr10 124569552 124569577 -15747188 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 390 200 42 11 chr10 124569590 124569685 -15747080 + MIR SINE MIR 61 158 -104 1467 174 4 0 chr10 124569691 124569955 -15746810 + L1MA4 LINE L1 6031 6295 -5 346 372 45 6 chr10 124570846 124571002 -15745763 - MIR3 SINE MIR -30 178 17 368 299 24 16 chr10 124571005 124571132 -15745633 - L2 LINE L2 -235 3037 2910 1801 167 6 22 chr10 124571259 124571576 -15745189 - AluJb SINE Alu 0 312 1 215 151 0 113 chr10 124571735 124571788 -15744977 + L2 LINE L2 3251 3297 -16 2430 174 69 19 chr10 124573346 124573822 -15742943 + MLT1D LTR MaLR 2 501 -4 840 210 5 76 chr10 124573923 124574395 -15742370 - MLT1A2 LTR MaLR 0 376 1 565 295 148 30 chr10 124574768 124575134 -15741631 - MLT1J2 LTR MaLR -41 409 1 643 184 0 4 chr10 124575232 124575441 -15741324 - AluJb SINE Alu -15 297 8 2089 125 0 0 chr10 124575799 124576108 -15740657 - AluSx SINE Alu 0 313 5 1978 205 37 0 chr10 124576307 124576683 -15740082 + MLT1B LTR MaLR 1 390 0 2114 121 84 35 chr10 124576780 124577127 -15739638 - THE1B LTR MaLR 0 364 1 340 245 122 58 chr10 124577407 124577492 -15739273 + MIR SINE MIR 51 129 -133 2227 100 0 14 chr10 124577492 124577783 -15738982 + AluSc SINE Alu 1 287 -22 340 245 122 58 chr10 124577783 124577805 -15738960 + MIR SINE MIR 129 148 -114 182 0 107 0 chr10 124577805 124577833 -15738932 + (TATAA)n Simple_repeat Simple_repeat 1 31 0 340 245 122 58 chr10 124577833 124577912 -15738853 + MIR SINE MIR 148 250 -12 344 354 75 0 chr10 124579215 124579362 -15737403 - MIR SINE MIR -82 180 23 1919 146 7 7 chr10 124580518 124580829 -15735936 - AluSx SINE Alu 0 311 1 2684 293 23 5 chr10 124580910 124581486 -15735279 - L1MA5 LINE L1 -2 6298 5713 3323 163 48 7 chr10 124581505 124582082 -15734683 - MER7C DNA MER2_type -1 601 1 269 298 24 12 chr10 124582264 124582348 -15734417 + Charlie8 DNA MER1_type 2 86 -2331 335 253 113 65 chr10 124582368 124582554 -15734211 + L1MC5 LINE L1 7486 7680 -281 46 19 0 0 chr10 124582588 124582641 -15734124 + AT_rich Low_complexity Low_complexity 1 53 0 2314 67 0 3 chr10 124582751 124583035 -15733730 - AluY SINE Alu -12 299 17 2287 84 0 26 chr10 124583694 124584003 -15732762 + AluSg SINE Alu 1 301 -9 437 311 78 32 chr10 124584003 124584222 -15732543 + MIR SINE MIR 22 250 -12 1968 137 10 13 chr10 124584606 124584913 -15731852 - AluJb SINE Alu -1 311 6 202 250 0 0 chr10 124585460 124585504 -15731261 + (TA)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr10 124586604 124586627 -15730138 + (TG)n Simple_repeat Simple_repeat 2 24 0 474 207 67 30 chr10 124587684 124587819 -15728946 + MER117 DNA MER1_type 7 146 -51 332 261 127 22 chr10 124588220 124588354 -15728411 + MER5A DNA MER1_type 7 154 -35 695 196 22 14 chr10 124588354 124588492 -15728273 - MER45A DNA AcHobo 0 178 40 1971 133 14 14 chr10 124588846 124589140 -15727625 + AluSx SINE Alu 1 294 -18 310 302 81 23 chr10 124589574 124589746 -15727019 - L2 LINE L2 -101 3212 3031 213 270 0 0 chr10 124589806 124589895 -15726870 + GA-rich Low_complexity Low_complexity 1 89 0 387 294 10 0 chr10 124589917 124590019 -15726746 - MLT1K LTR MaLR -292 296 194 2176 73 0 24 chr10 124590629 124590918 -15725847 + AluY SINE Alu 24 305 -6 301 219 14 27 chr10 124592866 124592939 -15723826 - MLT1K LTR MaLR 0 588 517 248 151 0 19 chr10 124592952 124593005 -15723760 + GA-rich Low_complexity Low_complexity 3 54 0 368 314 95 32 chr10 124593005 124593257 -15723508 - MLT1K LTR MaLR -66 522 255 2027 140 3 0 chr10 124594006 124594291 -15722474 + AluSx SINE Alu 1 286 -26 1330 235 24 7 chr10 124595662 124595960 -15720805 - MLT1H1 LTR MaLR -4 551 249 764 133 18 0 chr10 124595957 124596070 -15720695 - MLT1H1 LTR MaLR -538 116 2 * 1786 204 28 32 chr10 124596425 124596920 -15719845 + MLT1D LTR MaLR 5 497 -8 336 24 0 0 chr10 124597284 124597325 -15719440 + (CA)n Simple_repeat Simple_repeat 2 42 0 244 236 35 28 chr10 124597325 124597469 -15719296 + (TA)n Simple_repeat Simple_repeat 1 145 0 235 163 35 35 chr10 124597505 124597646 -15719119 + (TA)n Simple_repeat Simple_repeat 2 142 0 298 175 58 32 chr10 124597661 124597815 -15718950 + (TA)n Simple_repeat Simple_repeat 1 158 0 1317 221 30 28 chr10 124597854 124598216 -15718549 + MLT1C LTR MaLR 105 467 0 319 290 91 28 chr10 124598529 124598705 -15718060 - MER5A DNA MER1_type 0 189 3 727 270 53 0 chr10 124600070 124600296 -15716469 - LTR16C LTR ERVL 0 491 254 1330 257 83 29 chr10 124600516 124600995 -15715770 + MLT1D LTR MaLR 1 505 0 751 177 0 8 chr10 124601118 124601248 -15715517 - FLAM_C SINE Alu -4 129 1 186 43 0 0 chr10 124601344 124601367 -15715398 + (T)n Simple_repeat Simple_repeat 1 23 0 233 172 52 69 chr10 124602538 124602596 -15714169 - L2 LINE L2 -21 3292 3236 672 186 0 0 chr10 124602809 124602986 -15713779 + (TG)n Simple_repeat Simple_repeat 1 177 0 776 310 26 20 chr10 124603031 124603373 -15713392 - LTR16C LTR ERVL -7 484 141 889 244 53 13 chr10 124605456 124605681 -15711084 + MIR SINE MIR 13 246 -16 256 305 0 0 chr10 124605727 124605786 -15710979 - L2 LINE L2 -33 3239 3181 * 855 288 154 16 chr10 124605784 124606496 -15710269 - L2 LINE L2 0 3313 2489 236 168 53 116 chr10 124606493 124606588 -15710177 - L2 LINE L2 -106 3207 3119 * 1215 171 52 0 chr10 124606695 124606946 -15709819 + MER2 DNA MER2_type 82 345 0 280 269 0 26 chr10 124607020 124607098 -15709667 + L2 LINE L2 3150 3225 -47 1523 191 67 12 chr10 124607281 124607627 -15709138 + MLT1A1 LTR MaLR 1 365 0 237 210 32 0 chr10 124607697 124607759 -15709006 + MER2 DNA MER2_type 102 165 -180 379 276 92 0 chr10 124608017 124608115 -15708650 + L2 LINE L2 3165 3271 -1 305 281 93 88 chr10 124608308 124608504 -15708261 + MIR SINE MIR 30 218 -25 202 302 194 16 chr10 124608754 124608883 -15707882 + MIR3 SINE MIR 30 181 -27 24 53 0 0 chr10 124609404 124609442 -15707323 + AT_rich Low_complexity Low_complexity 1 38 0 2111 105 7 7 chr10 124609491 124609785 -15706980 - AluSx SINE Alu -18 294 1 215 77 0 26 chr10 124609813 124609852 -15706913 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 1659 184 26 0 chr10 124609852 124610124 -15706641 - AluJo SINE Alu -31 281 3 3448 194 54 58 chr10 124611599 124612045 -15704720 + L1MD2 LINE L1 5022 5468 -891 1690 198 3 3 chr10 124612045 124612354 -15704411 + AluJb SINE Alu 2 310 0 3448 194 54 58 chr10 124612354 124613244 -15703521 + L1MD2 LINE L1 5468 6346 -13 188 324 44 0 chr10 124613994 124614062 -15702703 + MIR3 SINE MIR 96 166 -42 315 0 0 0 chr10 124614654 124614689 -15702076 + (T)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 124615727 124615751 -15701014 + AT_rich Low_complexity Low_complexity 1 24 0 532 364 24 24 chr10 124616820 124617067 -15699698 - MIR SINE MIR -12 250 4 2051 90 4 0 chr10 124618334 124618601 -15698164 - AluSp SINE Alu -1 312 45 25 51 0 0 chr10 124619491 124619530 -15697235 + AT_rich Low_complexity Low_complexity 1 39 0 397 262 25 0 chr10 124619620 124619742 -15697023 + MER103 DNA DNA 31 155 -11 37 69 0 0 chr10 124621187 124621259 -15695506 + AT_rich Low_complexity Low_complexity 1 72 0 428 222 28 17 chr10 124621262 124621438 -15695327 + (TA)n Simple_repeat Simple_repeat 1 178 0 230 196 18 0 chr10 124621582 124621638 -15695127 - L1MC4 LINE L1 -1339 6703 6647 188 274 20 0 chr10 124622503 124622554 -15694211 - L2 LINE L2 -1 3312 3261 557 256 43 52 chr10 124622578 124622789 -15693976 + MIR SINE MIR 48 256 -6 589 260 110 18 chr10 124623131 124623466 -15693299 + L1ME3A LINE L1 5587 5952 -218 270 307 73 90 chr10 124624935 124625358 -15691407 - L2 LINE L2 0 3272 2857 1881 153 13 25 chr10 124625426 124625740 -15691025 + AluJb SINE Alu 1 310 -2 231 36 0 0 chr10 124626407 124626435 -15690330 + (CA)n Simple_repeat Simple_repeat 1 28 0 381 315 84 56 chr10 124626563 124626814 -15689951 - L1ME4a LINE L1 -195 5926 5669 200 35 35 0 chr10 124626884 124626913 -15689852 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1600 169 65 37 chr10 124627358 124627713 -15689052 - MLT1A1 LTR MaLR 0 365 1 193 302 69 69 chr10 124628742 124628901 -15687864 + MIR SINE MIR 34 192 -70 238 327 35 88 chr10 124630086 124630199 -15686566 + L2 LINE L2 3147 3253 -19 1067 239 29 40 chr10 124630414 124630790 -15685975 - L1ME2 LINE L1 -10 6154 5783 * 1641 220 62 2 chr10 124630785 124631285 -15685480 + L1M4 LINE L1 4288 4817 -1329 213 39 0 0 chr10 124631703 124631729 -15685036 + (TG)n Simple_repeat Simple_repeat 2 27 0 281 218 59 20 chr10 124631783 124631884 -15684881 - L1ME2 LINE L1 -460 5710 5606 272 315 37 0 chr10 124631907 124632015 -15684750 - L1ME2 LINE L1 -632 5546 5435 282 340 30 84 chr10 124634849 124635052 -15681713 - MIR3 SINE MIR -10 198 7 738 228 137 88 chr10 124636381 124636596 -15680169 - L1MC4 LINE L1 -2 8040 7837 832 146 0 8 chr10 124636596 124636752 -15680013 - FLAM_C SINE Alu 0 133 1 738 228 137 88 chr10 124636752 124637106 -15679659 - L1MC4 LINE L1 -205 7837 7443 644 265 182 3 chr10 124638030 124638354 -15678411 - L1MC4a LINE L1 -1919 5889 5508 368 299 107 62 chr10 124638439 124638908 -15677857 - L1MC4a LINE L1 -773 5373 4884 288 291 0 23 chr10 124639696 124639782 -15676983 + L2 LINE L2 3188 3271 -1 275 266 0 76 chr10 124640799 124640878 -15675887 - L2 LINE L2 -2 3270 3198 1757 137 31 0 chr10 124643535 124643791 -15672974 + AluSx SINE Alu 40 303 -9 864 210 27 11 chr10 124644391 124644577 -15672188 - MER5A DNA MER1_type 0 189 1 970 169 6 11 chr10 124645036 124645219 -15671546 - L1MB1 LINE L1 -5 6163 5982 1987 103 13 26 chr10 124645426 124645738 -15671027 + AluSq SINE Alu 1 308 -5 622 226 32 115 chr10 124645786 124646065 -15670700 + MER102b DNA MER1_type 86 341 0 5632 169 23 25 chr10 124646257 124647584 -15669181 + L1MC1 LINE L1 5004 6325 -8 2397 88 0 0 chr10 124647585 124647891 -15668874 - AluY SINE Alu -5 306 1 415 246 8 0 chr10 124648311 124648429 -15668336 - Charlie2 DNA MER1_type -791 2071 1953 335 180 0 0 chr10 124648433 124648494 -15668271 + Charlie2 DNA MER1_type 2802 2862 0 1346 265 30 45 chr10 124648850 124649250 -15667515 + MLT1I LTR MaLR 13 406 -3 551 267 28 68 chr10 124649552 124649802 -15666963 - MLT1K LTR MaLR -21 567 328 3071 82 20 2 chr10 124649802 124650204 -15666561 + MLT2A2 LTR ERVL 1 409 -44 213 240 0 0 chr10 124650208 124650258 -15666507 + (TA)n Simple_repeat Simple_repeat 2 51 0 346 247 0 32 chr10 124650258 124650351 -15666414 + L1MC4 LINE L1 6614 6703 -1339 805 104 14 21 chr10 124650367 124650511 -15666254 + (CATATA)n Simple_repeat Simple_repeat 2 144 0 662 335 47 39 chr10 124650990 124651500 -15665265 + L2 LINE L2 2308 2821 -493 707 266 37 81 chr10 124651608 124651665 -15665100 + L2 LINE L2 3005 3063 -250 765 230 5 0 chr10 124651665 124651852 -15664913 - MER53 DNA DNA -1 188 1 707 266 37 81 chr10 124651852 124652117 -15664648 + L2 LINE L2 3063 3313 0 2404 94 11 25 chr10 124653217 124653577 -15663188 + THE1A LTR MaLR 1 355 0 984 251 49 37 chr10 124653960 124654450 -15662315 + L1MEc LINE L1 1841 2336 -4060 701 253 9 47 chr10 124654452 124654642 -15662123 - MIR SINE MIR -52 210 29 256 260 0 14 chr10 124654648 124654721 -15662044 + GA-rich Low_complexity Low_complexity 2 73 0 273 232 0 14 chr10 124654722 124654791 -15661974 + HAL1 LINE L1 2045 2112 -395 506 281 105 46 chr10 124654821 124655231 -15661534 + HAL1 LINE L1 2070 2503 -4 1807 219 112 15 chr10 124655345 124655819 -15660946 - MLT2B1 LTR ERVL 0 520 1 77 38 0 0 chr10 124655937 124656042 -15660723 + AT_rich Low_complexity Low_complexity 1 105 0 288 260 89 16 chr10 124656365 124656488 -15660277 + L2 LINE L2 2148 2279 -1035 819 155 0 43 chr10 124656952 124657113 -15659652 + FRAM SINE Alu 3 156 -10 208 277 45 27 chr10 124657506 124657618 -15659147 + T-rich Low_complexity Low_complexity 2 115 0 222 276 0 17 chr10 124659353 124659411 -15657354 + MIR SINE MIR 91 147 -115 215 0 67 0 chr10 124659834 124659864 -15656901 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 641 136 51 0 chr10 124660043 124660161 -15656604 + AluSp SINE Alu 1 124 -189 218 364 9 0 chr10 124660334 124660444 -15656321 + CT-rich Low_complexity Low_complexity 2 112 0 1680 178 53 6 chr10 124662265 124662602 -15654163 - MLT2D LTR ERVL -61 353 1 208 273 0 15 chr10 124662604 124662670 -15654095 + (TA)n Simple_repeat Simple_repeat 2 66 0 462 286 34 22 chr10 124662857 124663035 -15653730 + MLT1D LTR MaLR 1 180 -325 507 17 0 0 chr10 124663822 124663882 -15652883 + (TG)n Simple_repeat Simple_repeat 2 61 0 214 333 78 11 chr10 124664332 124664422 -15652343 - MIR SINE MIR -70 138 43 189 0 0 0 chr10 124664594 124664615 -15652150 + (TTA)n Simple_repeat Simple_repeat 1 21 0 334 138 52 0 chr10 124664615 124664673 -15652092 - AluSg/x SINE Alu -34 268 208 8250 64 16 6 chr10 124664797 124665959 -15650806 + L1P LINE L1 3252 4424 -1722 280 243 14 29 chr10 124667525 124667595 -15649170 - L2 LINE L2 -1 3312 3244 1543 109 26 19 chr10 124667790 124668055 -15648710 - L1PA13 LINE L1 -4 6159 5893 283 243 57 0 chr10 124668393 124668463 -15648302 + MIR SINE MIR 56 129 -79 734 155 21 7 chr10 124668848 124668990 -15647775 - Tigger2 DNA MER2_type -295 2423 2280 398 174 14 0 chr10 124668987 124669056 -15647709 + MER8 DNA MER2_type 170 239 0 * 212 333 0 0 chr10 124669655 124669706 -15647059 + L2 LINE L2 3219 3269 -3 196 200 0 0 chr10 124669784 124669819 -15646946 - MIR SINE MIR -70 192 158 314 228 241 41 chr10 124670007 124670152 -15646613 - MIR3 SINE MIR -1 207 34 198 393 43 7 chr10 124670500 124670640 -15646125 + L2 LINE L2 2543 2687 -627 2109 112 0 3 chr10 124671114 124671419 -15645346 + AluSx SINE Alu 1 304 0 401 167 0 67 chr10 124671489 124671579 -15645186 + FLAM SINE Alu 41 124 -9 412 80 13 13 chr10 124671580 124671655 -15645110 + (TA)n Simple_repeat Simple_repeat 1 75 0 216 271 68 17 chr10 124672186 124672245 -15644520 - MER91A DNA MER1_type -8 188 127 322 302 31 31 chr10 124672273 124672369 -15644396 - MER91A DNA MER1_type -51 145 50 475 355 59 16 chr10 124673185 124673557 -15643208 - L2 LINE L2 -455 2859 2472 817 320 18 4 chr10 124674319 124674594 -15642171 - L2 LINE L2 -977 2337 2059 21 0 0 0 chr10 124674960 124674981 -15641784 + AT_rich Low_complexity Low_complexity 1 21 0 194 216 68 54 chr10 124676150 124676224 -15640541 - L3 LINE CR1 -2 1575 1501 2150 98 179 147 chr10 124676391 124677038 -15639727 - LTR12 LTR ERV1 -133 2032 57 231 250 0 0 chr10 124677042 124677094 -15639671 - LTR30 LTR ERV1 -670 52 1 261 321 63 19 chr10 124677969 124678099 -15638666 - MIR3 SINE MIR -6 202 73 2110 145 5 81 chr10 124678924 124679344 -15637421 + MLT1B LTR MaLR 1 388 -2 1550 161 13 53 chr10 124679425 124679729 -15637036 + AluJo SINE Alu 14 305 -7 225 67 0 0 chr10 124680881 124680911 -15635854 - AluS SINE Alu -193 110 81 953 104 7 15 chr10 124680911 124681046 -15635719 + AluSg/x SINE Alu 105 238 -74 314 179 0 28 chr10 124681309 124681415 -15635350 + T-rich Low_complexity Low_complexity 1 103 0 348 261 72 52 chr10 124681891 124682044 -15634721 + L2 LINE L2 3158 3313 0 2909 156 20 0 chr10 124682338 124682839 -15633926 - L1PB4 LINE L1 -7 6149 5639 647 220 48 42 chr10 124682855 124683085 -15633680 - L1ME1 LINE L1 -5 6161 5941 293 196 180 37 chr10 124683089 124683307 -15633458 - L1ME2 LINE L1 -280 5884 5640 658 111 0 0 chr10 124683565 124683655 -15633110 - AluS SINE Alu -222 90 1 2011 138 3 0 chr10 124683658 124683963 -15632802 - AluSx SINE Alu -6 306 1 899 178 126 0 chr10 124684133 124684324 -15632441 + MSTA LTR MaLR 1 215 -213 2539 176 98 15 chr10 124684332 124684414 -15632351 - L1MC3 LINE L1 -649 7136 7062 198 71 0 0 chr10 124684414 124684442 -15632323 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2539 176 98 15 chr10 124684442 124684594 -15632171 - L1MC3 LINE L1 -723 7062 6924 207 0 0 0 chr10 124684594 124684617 -15632148 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2539 176 98 15 chr10 124684617 124684920 -15631845 - L1MC3 LINE L1 -861 6924 6553 224 310 78 0 chr10 124685075 124685191 -15631574 + L2 LINE L2 2305 2429 -885 391 301 10 0 chr10 124685506 124685609 -15631156 - Charlie8 DNA MER1_type -2308 109 6 333 0 0 0 chr10 124685615 124685652 -15631113 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 80 0 0 chr10 124686012 124686037 -15630728 + (TG)n Simple_repeat Simple_repeat 1 25 0 288 326 22 11 chr10 124686395 124686551 -15630214 + CT-rich Low_complexity Low_complexity 1 157 0 246 307 11 23 chr10 124687532 124687620 -15629145 + MIR SINE MIR 158 244 -18 271 231 33 11 chr10 124691453 124691544 -15625221 + (TA)n Simple_repeat Simple_repeat 2 94 0 209 211 0 0 chr10 124691922 124691960 -15624805 + CT-rich Low_complexity Low_complexity 1 38 0 233 378 63 25 chr10 124693868 124694106 -15622659 - L2 LINE L2 -429 2885 2639 189 107 0 0 chr10 124694372 124694400 -15622365 + (CA)n Simple_repeat Simple_repeat 2 29 0 240 225 183 0 chr10 124694620 124694691 -15622074 + MIR3 SINE MIR 115 198 -10 21 0 0 0 chr10 124695648 124695669 -15621096 + AT_rich Low_complexity Low_complexity 1 21 0 852 252 53 22 chr10 124699693 124699919 -15616846 + MIR SINE MIR 1 233 -29 21 57 0 0 chr10 124699922 124699957 -15616808 + AT_rich Low_complexity Low_complexity 1 35 0 663 242 103 54 chr10 124699961 124700184 -15616581 - MIR SINE MIR -10 252 19 27 62 0 0 chr10 124701485 124701533 -15615232 + AT_rich Low_complexity Low_complexity 1 48 0 203 179 0 0 chr10 124701891 124701930 -15614835 + T-rich Low_complexity Low_complexity 1 39 0 2450 63 0 10 chr10 124702533 124702835 -15613930 + AluY SINE Alu 1 299 -12 806 226 86 1 chr10 124702990 124703218 -15613547 - MIR SINE MIR -13 249 4 487 195 130 111 chr10 124703406 124703667 -15613098 + LTR33 LTR ERVL 11 276 -245 494 217 116 0 chr10 124703672 124703801 -15612964 + LTR33 LTR ERVL 378 521 0 222 402 74 0 chr10 124705693 124705815 -15610950 + L2 LINE L2 3142 3272 0 2183 101 11 3 chr10 124706814 124707101 -15609664 + AluSx SINE Alu 14 302 -10 360 0 0 0 chr10 124707462 124707502 -15609263 + (TG)n Simple_repeat Simple_repeat 2 41 0 487 280 202 0 chr10 124710110 124710303 -15606462 - MIR SINE MIR -28 234 3 42 57 0 0 chr10 124711279 124711349 -15605416 + AT_rich Low_complexity Low_complexity 1 70 0 188 163 23 0 chr10 124715371 124715414 -15601351 + (TG)n Simple_repeat Simple_repeat 2 45 0 3011 144 36 35 chr10 124715617 124716165 -15600600 + MER44D DNA MER2_type 2 605 0 195 272 44 103 chr10 124716210 124716346 -15600419 + MER5A DNA MER1_type 49 176 -13 364 261 145 88 chr10 124716826 124717011 -15599754 - MLT1J2 LTR MaLR -14 436 228 833 193 137 0 chr10 124717011 124717208 -15599557 - MER58A DNA MER1_type 0 224 1 364 261 145 88 chr10 124717208 124717305 -15599460 - MLT1J2 LTR MaLR -222 228 138 23 78 0 0 chr10 124717440 124717491 -15599274 + AT_rich Low_complexity Low_complexity 1 51 0 516 273 113 57 chr10 124717897 124718303 -15598462 + MLT1J2 LTR MaLR 22 450 0 182 402 107 0 chr10 124718595 124718707 -15598058 - L2 LINE L2 -3 3269 3146 284 309 137 0 chr10 124720527 124720666 -15596099 - MIR SINE MIR 0 262 105 1330 201 81 19 chr10 124720778 124721101 -15595664 + MER2 DNA MER2_type 1 343 -1 192 188 0 0 chr10 124721224 124721288 -15595477 + (TA)n Simple_repeat Simple_repeat 1 64 0 26 64 0 0 chr10 124721820 124721867 -15594898 + AT_rich Low_complexity Low_complexity 1 47 0 338 245 66 19 chr10 124725299 124725405 -15591360 - MIR3 SINE MIR -11 197 87 25 31 0 0 chr10 124727987 124728019 -15588746 + AT_rich Low_complexity Low_complexity 1 32 0 332 261 145 111 chr10 124729724 124730184 -15586581 - L1M2 LINE L1 -5642 1207 446 452 264 46 17 chr10 124730396 124730570 -15586195 + MIR3 SINE MIR 7 185 -23 197 326 87 0 chr10 124732458 124732550 -15584215 - MIR SINE MIR -75 187 88 458 17 17 0 chr10 124732664 124732723 -15584042 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 326 263 115 4 chr10 124732907 124733032 -15583733 + MIR SINE MIR 7 145 -63 303 280 79 7 chr10 124733650 124733805 -15582960 - L1ME LINE L1 -372 5790 5622 249 272 44 79 chr10 124733810 124733924 -15582841 + MIR SINE MIR 14 124 -84 202 114 29 0 chr10 124734466 124734501 -15582264 + T-rich Low_complexity Low_complexity 5 40 0 432 290 167 5 chr10 124735404 124735590 -15581175 + MIR SINE MIR 47 262 0 438 266 0 0 chr10 124736105 124736233 -15580532 + CT-rich Low_complexity Low_complexity 4 131 0 180 0 0 0 chr10 124736234 124736254 -15580511 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 955 201 31 5 chr10 124736254 124736448 -15580317 - MLT1A1 LTR MaLR -58 307 109 243 423 8 0 chr10 124738854 124738984 -15577781 + L3 LINE CR1 879 1009 -568 1001 274 69 40 chr10 124738992 124739458 -15577307 + L2 LINE L2 1476 2000 -1314 28 48 0 0 chr10 124739626 124739668 -15577097 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 124739964 124739993 -15576772 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 124741822 124741846 -15574919 + AT_rich Low_complexity Low_complexity 1 24 0 191 149 0 21 chr10 124741851 124741898 -15574867 + (CAA)n Simple_repeat Simple_repeat 2 47 0 1906 119 16 55 chr10 124742370 124742681 -15574084 + AluSx SINE Alu 1 299 -13 1296 216 114 66 chr10 124743125 124743565 -15573200 - MER110 LTR ERV1 -30 461 1 191 255 39 20 chr10 124744070 124744121 -15572644 + L2 LINE L2 3238 3289 -24 399 41 0 0 chr10 124744330 124744379 -15572386 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 57 0 0 chr10 124747186 124747221 -15569544 + AT_rich Low_complexity Low_complexity 1 35 0 755 301 83 30 chr10 124747373 124748149 -15568616 - L1ME4a LINE L1 -105 6016 5198 28 0 0 0 chr10 124748284 124748312 -15568453 + AT_rich Low_complexity Low_complexity 1 28 0 1915 155 7 3 chr10 124748446 124748743 -15568022 - AluJo SINE Alu -14 298 1 2450 241 74 2 chr10 124748844 124749397 -15567368 + MLT1E LTR MaLR 1 593 0 1948 32 4 0 chr10 124749831 124750078 -15566687 - L1PA5 LINE L1 -1285 4861 4614 7452 31 2 0 chr10 124750078 124751350 -15565415 + L1PA5 LINE L1 4870 6143 -11 323 213 125 0 chr10 124751350 124751430 -15565335 + L1MC4 LINE L1 6614 6703 -1339 305 320 46 51 chr10 124751386 124751561 -15565204 - L1MC4 LINE L1 -1339 6703 6530 * 186 303 45 15 chr10 124752156 124752222 -15564543 + L2 LINE L2 3245 3312 -1 253 232 18 0 chr10 124752750 124752806 -15563959 - L1MD2 LINE L1 -254 6105 6049 412 341 126 40 chr10 124753093 124753688 -15563077 - L2 LINE L2 -5 3267 2622 1485 201 52 36 chr10 124755914 124756298 -15560467 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr10 124756612 124756634 -15560131 + AT_rich Low_complexity Low_complexity 1 22 0 1586 191 19 22 chr10 124757014 124757375 -15559390 - L1MB8 LINE L1 -4 6174 5815 5181 157 61 14 chr10 124757375 124758000 -15558765 - L1MCa LINE L1 -4937 1489 794 216 0 0 0 chr10 124758000 124758024 -15558741 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5181 157 61 14 chr10 124758024 124758445 -15558320 - L1MCa LINE L1 -5632 794 394 1794 184 18 6 chr10 124758516 124758859 -15557906 - L1MB8 LINE L1 -366 5818 5472 2608 146 36 28 chr10 124758872 124758918 -15557847 - L1MB2 LINE L1 -6 6165 6121 2008 145 3 0 chr10 124758918 124759214 -15557551 - AluSx SINE Alu -15 297 1 2608 146 36 28 chr10 124759214 124759668 -15557097 - L1MB2 LINE L1 -50 6121 5661 997 181 0 0 chr10 124759671 124759842 -15556923 - FRAM SINE Alu -10 166 1 1484 127 59 4 chr10 124759844 124760097 -15556668 - L1MB2 LINE L1 -524 5659 5393 234 365 96 0 chr10 124760442 124760546 -15556219 - MER81 DNA DNA 0 114 1 2536 36 0 55 chr10 124762007 124762336 -15554429 + AluY SINE Alu 1 311 0 229 149 90 0 chr10 124764313 124764380 -15552385 + MER103 DNA DNA 8 80 -86 862 260 29 41 chr10 124764381 124764623 -15552142 + MIR SINE MIR 2 240 -22 396 0 0 0 chr10 124764715 124764759 -15552006 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 225 0 0 0 chr10 124764792 124764817 -15551948 + (GA)n Simple_repeat Simple_repeat 1 25 0 610 211 19 39 chr10 124765067 124765223 -15551542 - L2 LINE L2 -1 3312 3160 2315 97 10 0 chr10 124766049 124766358 -15550407 - AluSp SINE Alu -1 312 1 343 287 0 11 chr10 124766449 124766543 -15550222 - MIR3 SINE MIR -7 201 109 2144 162 70 8 chr10 124766963 124767364 -15549401 - MSTA LTR MaLR 0 428 3 9092 164 11 43 chr10 124767366 124769072 -15547693 - MSTA-int LTR MaLR 0 1651 1 2188 162 61 10 chr10 124769072 124769285 -15547480 - MSTA LTR MaLR 0 428 227 432 0 0 0 chr10 124769285 124769333 -15547432 + (TG)n Simple_repeat Simple_repeat 2 49 0 2188 162 61 10 chr10 124769333 124769526 -15547239 - MSTA LTR MaLR -201 227 1 1080 144 6 0 chr10 124770158 124770318 -15546447 + AluSg/x SINE Alu 134 294 -16 2288 116 0 0 chr10 124770320 124770631 -15546134 + AluSx SINE Alu 1 311 -1 220 173 55 8 chr10 124770673 124770800 -15545965 + (TA)n Simple_repeat Simple_repeat 1 133 0 326 100 17 0 chr10 124771287 124771347 -15545418 + (CA)n Simple_repeat Simple_repeat 2 62 0 200 333 12 25 chr10 124773346 124773427 -15543338 - L2 LINE L2 0 3313 3234 911 286 152 22 chr10 124773455 124774306 -15542459 - L2 LINE L2 0 3313 2343 1297 207 146 47 chr10 124774306 124774750 -15542015 - MLT1D LTR MaLR 0 505 18 575 307 90 33 chr10 124774816 124775148 -15541617 - L2 LINE L2 -1257 2057 1707 249 268 42 0 chr10 124775130 124775201 -15541564 - L2 LINE L2 -213 3059 2986 * 245 397 74 5 chr10 124775257 124775446 -15541319 - L2 LINE L2 -556 2758 2557 1668 173 50 11 chr10 124775736 124776013 -15540752 + AluJb SINE Alu 1 288 -24 774 334 69 11 chr10 124776056 124776580 -15540185 - L2 LINE L2 -1050 2264 1711 452 199 228 7 chr10 124776948 124777084 -15539681 + L2 LINE L2 1846 2011 -1303 660 167 61 15 chr10 124777423 124777555 -15539210 + L2 LINE L2 3176 3313 0 21 0 0 0 chr10 124778080 124778101 -15538664 + AT_rich Low_complexity Low_complexity 1 21 0 415 375 20 0 chr10 124779535 124779687 -15537078 - MIR3 SINE MIR -14 194 40 323 23 0 0 chr10 124780402 124780446 -15536319 + L1PA3 LINE L1 6111 6154 -1 228 278 47 34 chr10 124781178 124781287 -15535478 - MER5B DNA MER1_type -68 121 2 243 259 0 0 chr10 124782174 124782232 -15534533 + (CAA)n Simple_repeat Simple_repeat 2 59 0 813 220 65 0 chr10 124782247 124782433 -15534332 - MIR SINE MIR -13 249 52 211 311 78 0 chr10 124782569 124782659 -15534106 - MIR SINE MIR -54 208 112 1589 51 46 9 chr10 124783288 124783504 -15533261 - L1PA7 LINE L1 -3 6151 5928 243 341 32 63 chr10 124785696 124785822 -15530943 - MIR SINE MIR -66 142 21 1179 273 46 15 chr10 124786364 124786759 -15530006 + LTR16C LTR ERVL 83 489 -2 305 331 48 54 chr10 124787117 124787283 -15529482 - MIR3 SINE MIR -19 189 25 25 0 0 68 chr10 124787646 124787690 -15529075 + AT_rich Low_complexity Low_complexity 1 41 0 373 298 161 6 chr10 124788250 124788411 -15528354 - MIR3 SINE MIR -9 199 14 724 238 78 19 chr10 124789319 124789525 -15527240 - MIR SINE MIR -34 228 11 285 55 455 0 chr10 124793425 124793480 -15523285 + MADE1 DNA Mariner 1 80 0 259 254 42 0 chr10 124793613 124793684 -15523081 - L2 LINE L2 -4 3268 3195 204 294 165 0 chr10 124794143 124794228 -15522537 + MIR SINE MIR 58 156 -106 2176 80 11 21 chr10 124794232 124794540 -15522225 + AluY SINE Alu 1 305 0 2290 99 14 0 chr10 124796115 124796409 -15520356 + AluSx SINE Alu 1 298 -14 235 284 82 67 chr10 124798257 124798391 -15518374 + MIR SINE MIR 63 198 -64 189 175 0 0 chr10 124799704 124799744 -15517021 + (TG)n Simple_repeat Simple_repeat 2 41 0 268 211 0 35 chr10 124800493 124800550 -15516215 + L2 LINE L2 3217 3271 -1 620 304 35 2 chr10 124801003 124801203 -15515562 - MIR3 SINE MIR -4 204 1 180 286 18 0 chr10 124801616 124801672 -15515093 + L2 LINE L2 3257 3313 0 259 307 183 36 chr10 124801789 124801926 -15514839 + L2 LINE L2 3116 3272 0 1208 138 32 32 chr10 124801959 124802176 -15514589 - MER20 DNA MER1_type 0 219 3 195 69 0 0 chr10 124803105 124803134 -15513631 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 627 248 101 28 chr10 124804730 124804948 -15511817 - MIR SINE MIR -9 253 20 186 269 96 0 chr10 124805316 124805368 -15511397 + L2 LINE L2 3248 3304 -9 181 347 31 51 chr10 124805740 124805838 -15510927 - MIR SINE MIR -147 115 20 303 283 91 0 chr10 124806136 124806235 -15510530 + MIR SINE MIR 30 137 -71 1473 194 113 80 chr10 124806328 124806817 -15509948 + MLT1D LTR MaLR 1 505 0 210 71 0 0 chr10 124807448 124807476 -15509289 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 4402 168 39 22 chr10 124807606 124807724 -15509041 - L1PB4 LINE L1 0 6156 6042 1858 118 207 11 chr10 124807724 124808081 -15508684 + MSTA LTR MaLR 1 427 -1 4402 168 39 22 chr10 124808081 124809807 -15506958 - L1PB4 LINE L1 -114 6042 4280 238 289 19 29 chr10 124809875 124809979 -15506786 - L2 LINE L2 -182 3090 2988 207 275 225 12 chr10 124809976 124810056 -15506709 - L3 LINE CR1 -150 1427 1331 * 584 305 120 44 chr10 124810407 124810908 -15505857 + L2 LINE L2 2430 2968 -346 511 296 75 92 chr10 124810890 124811006 -15505759 + L2 LINE L2 2863 2979 -293 * 312 70 0 0 chr10 124811006 124811049 -15505716 + (CA)n Simple_repeat Simple_repeat 1 43 0 511 296 75 92 chr10 124811049 124811344 -15505421 + L2 LINE L2 2979 3267 -5 434 306 143 14 chr10 124811954 124812163 -15504602 + MIR SINE MIR 19 254 -8 23 0 0 0 chr10 124812463 124812486 -15504279 + AT_rich Low_complexity Low_complexity 1 23 0 572 278 72 31 chr10 124813467 124813690 -15503075 + MIR SINE MIR 20 251 -11 518 231 206 42 chr10 124814468 124814715 -15502050 + HAL1b LINE L1 318 523 -825 2502 51 0 0 chr10 124814715 124815008 -15501757 + AluY SINE Alu 1 293 -18 518 231 206 42 chr10 124815008 124815120 -15501645 + HAL1b LINE L1 523 736 -612 1001 161 28 0 chr10 124816049 124816229 -15500536 + MER5A DNA MER1_type 5 189 0 409 293 79 57 chr10 124816552 124816869 -15499896 + L1ME LINE L1 2588 2911 -3235 363 304 65 0 chr10 124816872 124817056 -15499709 + L1ME LINE L1 3757 3952 -2194 270 56 0 0 chr10 124817376 124817412 -15499353 + (TA)n Simple_repeat Simple_repeat 1 36 0 568 288 58 18 chr10 124817426 124817808 -15498957 + L1ME LINE L1 4437 4833 -1313 484 299 64 43 chr10 124818034 124818403 -15498362 + L1ME LINE L1 5045 5435 -762 593 287 112 32 chr10 124818701 124818809 -15497956 - L1ME3A LINE L1 -230 5923 5825 2411 138 28 0 chr10 124818809 124819163 -15497602 - THE1B LTR MaLR 0 364 1 593 287 112 32 chr10 124819163 124820159 -15496606 - L1ME3A LINE L1 -328 5825 4724 659 271 62 52 chr10 124820330 124820961 -15495804 - L1ME3A LINE L1 -1587 4542 3104 269 309 44 22 chr10 124820998 124821273 -15495492 - L1ME3A LINE L1 -3105 3024 2744 2129 112 0 3 chr10 124821367 124821692 -15495073 - AluSg1 SINE Alu 0 324 1 417 97 0 0 chr10 124821719 124821791 -15494974 + (TC)n Simple_repeat Simple_repeat 1 72 0 373 371 78 36 chr10 124821869 124821989 -15494776 - L1ME3A LINE L1 -5310 809 695 1951 117 40 0 chr10 124821989 124822283 -15494482 - AluSx SINE Alu 0 305 1 373 371 78 36 chr10 124822283 124822522 -15494243 - L1ME3A LINE L1 -5424 695 434 335 270 97 65 chr10 124822882 124823067 -15493698 + L1ME LINE L1 5462 5652 -469 212 195 39 13 chr10 124823067 124823144 -15493621 + (TTAA)n Simple_repeat Simple_repeat 2 80 0 845 195 107 111 chr10 124823402 124823869 -15492896 - LTR37B LTR ERV1 0 468 4 376 376 72 58 chr10 124823895 124824411 -15492354 + L2 LINE L2 2408 2930 -384 2346 122 0 0 chr10 124825908 124826250 -15490515 + AluSx SINE Alu 1 342 0 193 296 80 0 chr10 124826647 124826735 -15490030 - MIR SINE MIR -96 112 18 226 308 28 55 chr10 124827003 124827185 -15489580 + L1MEd LINE L1 102 278 -5841 27 0 0 0 chr10 124827757 124827784 -15488981 + AT_rich Low_complexity Low_complexity 1 27 0 337 172 54 32 chr10 124828833 124828926 -15487839 - MIR SINE MIR -40 222 128 220 229 0 33 chr10 124829107 124829168 -15487597 + (CACTC)n Simple_repeat Simple_repeat 1 59 0 290 232 63 32 chr10 124829767 124829862 -15486903 - MIR SINE MIR -100 162 65 197 356 81 23 chr10 124830291 124830465 -15486300 - L3 LINE CR1 -20 1557 1374 196 113 48 129 chr10 124830506 124830568 -15486197 - MIR SINE MIR -67 141 85 340 268 0 0 chr10 124830805 124830887 -15485878 + L2 LINE L2 3155 3236 -36 936 251 65 18 chr10 124832496 124832879 -15483886 - L1ME4a LINE L1 -188 5933 5533 235 260 60 0 chr10 124832943 124833043 -15483722 - L1ME4a LINE L1 -669 5452 5347 316 229 76 108 chr10 124833054 124833211 -15483554 + MIR SINE MIR 101 252 -10 317 350 175 9 chr10 124833319 124833536 -15483229 - MIR SINE MIR -1 261 9 260 253 82 68 chr10 124833565 124833711 -15483054 + MIR3 SINE MIR 33 180 -28 1259 157 42 0 chr10 124833877 124834094 -15482671 - MER46A DNA MER2_type 0 236 11 216 67 0 0 chr10 124834095 124834125 -15482640 + (TG)n Simple_repeat Simple_repeat 2 31 0 333 164 45 0 chr10 124834139 124834206 -15482559 - MIR SINE MIR -87 175 106 328 94 19 0 chr10 124834351 124834404 -15482361 + MER65B LTR ERV1 1 54 -477 395 354 24 24 chr10 124835084 124835290 -15481475 - L1ME4a LINE L1 -227 5894 5689 2304 106 3 0 chr10 124835561 124835872 -15480893 - AluSq SINE Alu 0 313 2 547 207 9 60 chr10 124836127 124836243 -15480522 + MER81 DNA DNA 2 111 -3 258 359 151 16 chr10 124836248 124836440 -15480325 + L3 LINE CR1 1282 1499 -78 269 277 0 0 chr10 124836440 124836505 -15480260 + MER5B DNA MER1_type 1 65 -113 10532 187 22 7 chr10 124836510 124839829 -15476936 + L1PA16 LINE L1 2791 6148 -18 21 36 0 0 chr10 124839829 124839857 -15476908 + AT_rich Low_complexity Low_complexity 1 28 0 445 295 16 8 chr10 124839858 124839987 -15476778 + MER5B DNA MER1_type 49 178 0 250 311 95 0 chr10 124840043 124840117 -15476648 - MER5A DNA MER1_type -83 106 26 180 306 16 16 chr10 124840192 124840254 -15476511 + L3 LINE CR1 1513 1574 -3 294 324 86 9 chr10 124840808 124840913 -15475852 + MIR SINE MIR 2 114 -148 266 341 93 0 chr10 124841714 124841843 -15474922 - MIR SINE MIR -70 192 52 287 343 136 0 chr10 124842307 124842447 -15474318 - L2 LINE L2 -16 3256 3098 257 246 15 0 chr10 124842539 124842604 -15474161 + LTR67 LTR ERVL 2 67 -490 1506 187 42 7 chr10 124842774 124842894 -15473871 + AluJo SINE Alu 1 115 -197 219 69 0 0 chr10 124842894 124842923 -15473842 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1506 187 42 7 chr10 124842923 124843086 -15473679 + AluJo SINE Alu 115 294 -18 576 324 40 57 chr10 124843089 124843438 -15473327 + LTR67 LTR ERVL 199 541 -16 225 339 110 24 chr10 124843727 124843854 -15472911 - L2 LINE L2 -6 3266 3129 23 0 0 0 chr10 124843917 124843940 -15472825 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 124845344 124845369 -15471396 + AT_rich Low_complexity Low_complexity 1 25 0 2166 144 0 0 chr10 124845641 124845953 -15470812 + AluSx SINE Alu 1 312 0 854 177 40 17 chr10 124845995 124846170 -15470595 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 124846155 124846216 -15470549 + MER41B LTR ERV1 484 545 -90 * 1984 132 3 10 chr10 124846799 124847087 -15469678 + AluSx SINE Alu 1 286 -26 198 0 0 0 chr10 124847093 124847115 -15469650 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 628 303 75 0 chr10 124847519 124847747 -15469018 - MIR SINE MIR -16 246 2 2042 131 12 29 chr10 124848578 124848921 -15467844 + MER1B DNA MER1_type 1 337 0 1888 123 43 65 chr10 124849193 124849544 -15467221 - MER2 DNA MER2_type 0 344 2 304 98 0 0 chr10 124849694 124849735 -15467030 + Tigger2 DNA MER2_type 6 46 -2672 2175 237 127 66 chr10 124850933 124852447 -15464318 + L1MC4a LINE L1 4966 5333 -813 2011 143 27 0 chr10 124852573 124852874 -15463891 + AluSc SINE Alu 1 309 0 297 292 107 36 chr10 124853009 124853177 -15463588 + MIR SINE MIR 13 192 -70 434 250 118 21 chr10 124853269 124853413 -15463352 + L1ME LINE L1 5530 5687 -434 2002 122 24 3 chr10 124853488 124853783 -15462982 + AluSc SINE Alu 1 301 -8 26 0 0 0 chr10 124853842 124853868 -15462897 + AT_rich Low_complexity Low_complexity 1 26 0 1032 218 111 83 chr10 124854027 124854459 -15462306 - L1MC4 LINE L1 -887 7155 6712 222 295 158 0 chr10 124855034 124855129 -15461636 + MIR SINE MIR 31 140 -122 1104 229 44 61 chr10 124855170 124855199 -15461566 + LTR37A LTR ERV1 19 47 -379 658 220 115 35 chr10 124855199 124855399 -15461366 + MER20 DNA MER1_type 1 216 -3 1104 229 44 61 chr10 124855399 124855780 -15460985 + LTR37A LTR ERV1 47 422 -4 241 350 10 0 chr10 124858418 124858518 -15458247 - L3b LINE CR1 -338 1245 1145 755 198 82 87 chr10 124858968 124859175 -15457590 + MER63A DNA MER1_type 1 206 -4 3312 238 48 8 chr10 124859275 124860273 -15456492 + L1ME2 LINE L1 3014 4051 -2095 296 179 0 0 chr10 124860273 124860329 -15456436 - MLT2C1 LTR ERVL 0 520 465 2068 153 13 28 chr10 124860381 124860756 -15456009 - MLT2C1 LTR ERVL -38 482 1 4005 198 79 47 chr10 124860756 124862082 -15454683 + L1ME2 LINE L1 4064 5463 -701 4251 123 8 0 chr10 124862082 124862717 -15454048 + L1PA16 LINE L1 5524 6163 -3 4005 198 79 47 chr10 124862717 124863182 -15453583 + L1ME2 LINE L1 5463 5912 -252 1732 190 5 46 chr10 124863183 124863446 -15453319 - MLT1A1 LTR MaLR -2 363 118 1693 68 4 68 chr10 124863446 124863709 -15453056 - L1PA6 LINE L1 -1 6153 5908 1732 190 5 46 chr10 124863709 124863813 -15452952 - MLT1A1 LTR MaLR -247 118 11 237 149 43 0 chr10 124863826 124863873 -15452892 + L1ME2 LINE L1 5906 5954 -210 536 179 76 35 chr10 124863893 124864038 -15452727 + L1MA10 LINE L1 6180 6330 -4 366 296 9 9 chr10 124864351 124864466 -15452299 - LTR67 LTR ERVL -367 190 76 675 67 0 0 chr10 124864630 124864719 -15452046 + (GAATG)n Simple_repeat Simple_repeat 4 92 0 180 333 27 13 chr10 124865022 124865097 -15451668 + MIR SINE MIR 21 96 -166 1017 93 0 0 chr10 124865613 124865764 -15451001 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 778 266 164 62 chr10 124867217 124867788 -15448977 - L2 LINE L2 -4 3309 2701 21 0 0 0 chr10 124868106 124868127 -15448638 + AT_rich Low_complexity Low_complexity 1 21 0 5355 150 29 19 chr10 124868188 124869160 -15447605 - L1MC1 LINE L1 -6 6327 5347 2290 108 33 28 chr10 124869185 124869546 -15447219 + THE1B LTR MaLR 1 363 -1 337 248 116 8 chr10 124869789 124869910 -15446855 - MIR SINE MIR -5 257 124 414 296 53 90 chr10 124869932 124870018 -15446747 - MLT1K LTR MaLR -24 564 476 2181 123 0 0 chr10 124870018 124870311 -15446454 + AluSx SINE Alu 1 293 -19 414 296 53 90 chr10 124870311 124870579 -15446186 - MLT1K LTR MaLR -112 476 223 1249 186 9 0 chr10 124870755 124870976 -15445789 + MER58A DNA MER1_type 1 223 -1 470 331 92 23 chr10 124871133 124871523 -15445242 - L2 LINE L2 -348 2966 2550 221 316 104 74 chr10 124872996 124873293 -15443472 - L2 LINE L2 -4 3268 2963 202 282 9 55 chr10 124873784 124873894 -15442871 - L2 LINE L2 -353 2961 2857 244 294 34 67 chr10 124874148 124874267 -15442498 - MER91B DNA MER1_type -74 116 2 270 136 0 0 chr10 124874268 124874312 -15442453 + (CA)n Simple_repeat Simple_repeat 2 45 0 234 313 73 62 chr10 124876896 124876992 -15439773 - MIR3 SINE MIR -52 156 60 486 304 49 66 chr10 124877280 124877829 -15438936 - L1ME4a LINE L1 -104 6017 5478 814 165 0 63 chr10 124877850 124878008 -15438757 + FAM SINE Alu 21 168 -17 2122 134 0 7 chr10 124878130 124878435 -15438330 - AluSx SINE Alu -7 305 3 25 0 0 0 chr10 124878437 124878462 -15438303 + AT_rich Low_complexity Low_complexity 1 25 0 2755 215 107 39 chr10 124878659 124880315 -15436450 - L1ME1 LINE L1 -93 6142 4379 545 207 0 13 chr10 124880357 124880956 -15435809 + (TA)n Simple_repeat Simple_repeat 1 590 0 310 292 45 0 chr10 124880956 124881045 -15435720 + L1MC4 LINE L1 6613 6705 -1337 566 245 0 15 chr10 124881051 124881603 -15435162 + (TA)n Simple_repeat Simple_repeat 1 543 0 7333 227 44 23 chr10 124881605 124884268 -15432497 - L1ME1 LINE L1 -1806 4409 1752 3810 261 78 29 chr10 124884275 124885821 -15430944 - L1ME1 LINE L1 -4738 1658 38 263 250 0 25 chr10 124885824 124885904 -15430861 + LTR67 LTR ERVL 468 545 -12 661 283 52 90 chr10 124886069 124886415 -15430350 + L2 LINE L2 2940 3272 0 365 301 122 6 chr10 124886696 124886852 -15429913 - MIR3 SINE MIR -20 188 15 303 287 0 0 chr10 124887139 124887226 -15429539 + (TATATG)n Simple_repeat Simple_repeat 5 91 0 232 275 37 18 chr10 124888040 124888149 -15428616 - 7SK RNA RNA -74 119 9 312 143 0 0 chr10 124889616 124889672 -15427093 + (TA)n Simple_repeat Simple_repeat 1 56 0 320 309 10 119 chr10 124890590 124890725 -15426040 + MIR3 SINE MIR 33 142 -66 948 226 58 0 chr10 124890725 124890933 -15425832 + MER58A DNA MER1_type 2 221 -3 320 309 10 119 chr10 124890933 124890991 -15425774 + MIR3 SINE MIR 142 205 -3 390 202 18 9 chr10 124892681 124892795 -15423970 + GA-rich Low_complexity Low_complexity 4 118 0 181 304 104 0 chr10 124893194 124893309 -15423456 - MIR SINE MIR -17 245 119 26 50 0 0 chr10 124893547 124893587 -15423178 + AT_rich Low_complexity Low_complexity 1 40 0 1356 219 1 57 chr10 124893687 124894066 -15422699 + L1MC4 LINE L1 6241 6359 0 2251 93 0 3 chr10 124894458 124894749 -15422016 + AluSq SINE Alu 7 296 -17 25 0 0 0 chr10 124895026 124895051 -15421714 + AT_rich Low_complexity Low_complexity 1 25 0 259 309 111 37 chr10 124895124 124895286 -15421479 + MIR3 SINE MIR 20 193 -15 293 175 165 21 chr10 124895671 124895768 -15420997 + MER113 DNA MER1_type? 9 119 -402 446 327 40 31 chr10 124895872 124896044 -15420721 - MIR3 SINE MIR -43 165 17 23 33 0 0 chr10 124896247 124896277 -15420488 + AT_rich Low_complexity Low_complexity 1 30 0 2289 119 0 0 chr10 124898508 124898820 -15417945 + AluSx SINE Alu 1 312 0 518 225 195 24 chr10 124900581 124900750 -15416015 - MIR SINE MIR -50 212 15 1868 201 49 0 chr10 124900856 124901204 -15415561 - MLT1A1 LTR MaLR 0 365 1 2090 128 7 0 chr10 124901214 124901225 -15415540 - AluSx SINE Alu -20 292 283 253 111 0 0 chr10 124901225 124901270 -15415495 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 2090 128 7 0 chr10 124901270 124901546 -15415219 - AluSx SINE Alu -29 283 3 1347 211 122 8 chr10 124901657 124902017 -15414748 + MLT1C LTR MaLR 59 459 -8 2537 55 0 7 chr10 124902677 124902984 -15413781 + AluY SINE Alu 1 305 -6 239 318 23 0 chr10 124903175 124903263 -15413502 + MIR3 SINE MIR 108 197 -11 221 0 35 0 chr10 124903321 124903350 -15413415 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 238 250 19 0 chr10 124904203 124904255 -15412510 + L2 LINE L2 3140 3192 -80 233 293 13 27 chr10 124904487 124904562 -15412203 - L2 LINE L2 -80 3192 3119 4188 219 61 30 chr10 124905804 124908943 -15407822 + L1MD1 LINE L1 1 3043 -3593 1857 129 0 15 chr10 124908943 124909207 -15407558 + AluSx SINE Alu 35 294 -18 4188 219 61 30 chr10 124909207 124911123 -15405642 + L1MD1 LINE L1 3043 5543 -1093 1666 184 0 43 chr10 124911123 124911428 -15405337 + AluJb SINE Alu 1 292 -20 4188 219 61 30 chr10 124911428 124912557 -15404208 + L1MD1 LINE L1 5543 6636 0 2203 92 0 14 chr10 124912985 124913269 -15403496 + AluSc SINE Alu 1 282 -27 255 93 0 0 chr10 124913269 124913312 -15403453 + (CATA)n Simple_repeat Simple_repeat 2 44 0 231 367 13 0 chr10 124913395 124913474 -15403291 + MLT1G1 LTR MaLR 81 160 -435 7393 160 33 29 chr10 124913485 124914829 -15401936 + Ricksha DNA DNA 1896 3244 -2 208 303 126 8 chr10 124914892 124915011 -15401754 - L2 LINE L2 0 3313 3181 288 313 93 62 chr10 124915183 124915271 -15401494 - L2 LINE L2 -1441 1873 1789 2013 78 0 30 chr10 124915271 124915541 -15401224 - AluSq SINE Alu -13 300 39 288 313 93 62 chr10 124915541 124915970 -15400795 - L2 LINE L2 -1525 1789 1340 424 189 90 16 chr10 124915985 124916107 -15400658 - LTR50 LTR ERVL -28 767 637 479 313 26 21 chr10 124916115 124916307 -15400458 - L1ME LINE L1 -320 5801 5609 2578 105 22 19 chr10 124916558 124916921 -15399844 - THE1B LTR MaLR 0 364 1 29 0 0 0 chr10 124917319 124917348 -15399417 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 124918208 124918232 -15398533 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 360 0 0 0 chr10 124918780 124918820 -15397945 + (TC)n Simple_repeat Simple_repeat 1 40 0 437 302 12 17 chr10 124919265 124919437 -15397328 + MER5A DNA MER1_type 19 189 0 592 56 37 9 chr10 124921159 124921266 -15395499 + (TG)n Simple_repeat Simple_repeat 1 110 0 324 0 0 0 chr10 124922164 124922200 -15394565 + (GA)n Simple_repeat Simple_repeat 1 36 0 2388 81 3 0 chr10 124922943 124923239 -15393526 + AluSp SINE Alu 1 297 -16 241 103 0 51 chr10 124923272 124923311 -15393454 - Tigger7 DNA MER2_type -6 2481 2445 387 145 0 43 chr10 124923436 124923505 -15393260 + HY3 scRNA scRNA 2 67 -34 * 2780 188 22 2 chr10 124923472 124923961 -15392804 - Tigger7 DNA MER2_type -234 499 1 186 135 0 81 chr10 124924088 124924125 -15392640 + L2 LINE L2 3271 3304 -9 385 218 39 0 chr10 124927060 124927138 -15389627 - L2 LINE L2 -1 3271 3191 532 270 0 0 chr10 124927164 124927275 -15389490 + MER81 DNA DNA 4 114 0 784 148 44 93 chr10 124927458 124927641 -15389124 - MER69A DNA AcHobo -2 175 2 412 190 156 11 chr10 124927671 124927781 -15388984 - MIR SINE MIR -65 143 74 2471 66 3 0 chr10 124927783 124928084 -15388681 - AluY SINE Alu -9 302 1 212 31 62 0 chr10 124928451 124928483 -15388282 + T-rich Low_complexity Low_complexity 2 35 0 733 241 115 0 chr10 124928613 124928804 -15387961 + MIR SINE MIR 20 232 -30 375 67 0 40 chr10 124930281 124930356 -15386409 + (TTCA)n Simple_repeat Simple_repeat 2 73 0 363 144 144 67 chr10 124930468 124930517 -15386248 - MLT1C LTR MaLR -205 262 218 2513 147 15 13 chr10 124930517 124930906 -15385859 + MLT1B LTR MaLR 1 390 0 363 144 144 67 chr10 124930906 124930946 -15385819 - MLT1C LTR MaLR -249 218 166 2224 116 3 0 chr10 124930956 124931259 -15385506 + AluSx SINE Alu 1 304 -8 396 329 96 59 chr10 124931302 124931865 -15384900 + L1MEd LINE L1 135 718 -5487 736 209 11 0 chr10 124932137 124932314 -15384451 + GA-rich Low_complexity Low_complexity 2 180 0 387 74 19 0 chr10 124932314 124932368 -15384397 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 700 156 86 8 chr10 124932369 124932497 -15384268 - MLT1C LTR MaLR -324 143 6 444 274 26 8 chr10 124933007 124933124 -15383641 - MER5B DNA MER1_type -59 119 1 23 0 0 0 chr10 124936677 124936700 -15380065 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr10 124936869 124936907 -15379858 + AT_rich Low_complexity Low_complexity 1 38 0 180 111 0 0 chr10 124937115 124937142 -15379623 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 269 192 0 68 chr10 124942834 124942907 -15373858 + (TATG)n Simple_repeat Simple_repeat 2 69 0 31 58 0 0 chr10 124943127 124943179 -15373586 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr10 124943240 124943263 -15373502 + AT_rich Low_complexity Low_complexity 1 23 0 444 327 77 14 chr10 124943364 124943661 -15373104 + L1MEd LINE L1 35 350 -6046 2417 80 0 3 chr10 124943773 124944074 -15372691 + AluY SINE Alu 1 300 -11 1447 112 0 42 chr10 124944153 124944368 -15372397 + AluSg/x SINE Alu 101 306 -6 1176 165 70 12 chr10 124944709 124944951 -15371814 - MER101B LTR ERV1 -314 256 1 3037 172 49 38 chr10 124945535 124945897 -15370868 + L1MA4 LINE L1 5636 6010 -290 1848 113 0 4 chr10 124945897 124946145 -15370620 + AluSg SINE Alu 1 247 -63 3037 172 49 38 chr10 124946145 124946440 -15370325 + L1MA4 LINE L1 6010 6300 0 319 341 47 65 chr10 124947377 124947547 -15369218 - MIR SINE MIR -87 175 9 354 45 0 0 chr10 124948134 124948178 -15368587 + (GA)n Simple_repeat Simple_repeat 1 44 0 302 326 23 23 chr10 124948282 124948454 -15368311 + L1MEd LINE L1 454 625 -5072 398 328 110 15 chr10 124948514 124948840 -15367925 + L1MEd LINE L1 868 1224 -4981 1158 135 46 14 chr10 124948946 124949163 -15367602 + MLT2A2 LTR ERVL 293 453 0 419 325 13 19 chr10 124949165 124949319 -15367446 + MIR SINE MIR 93 245 -17 405 281 11 134 chr10 124950306 124950673 -15366092 + L2 LINE L2 2866 3260 -12 552 196 3 90 chr10 124951042 124951199 -15365566 + MER34B LTR ERV1 1 160 -382 244 359 52 24 chr10 124951327 124951539 -15365226 - L2 LINE L2 -244 3028 2811 2231 113 10 0 chr10 124952396 124952698 -15364067 - AluSx SINE Alu -7 305 1 299 221 198 12 chr10 124953213 124953299 -15363466 - L2 LINE L2 0 3313 3212 989 181 6 0 chr10 124953299 124953459 -15363306 + AluJb SINE Alu 133 293 -19 187 237 0 0 chr10 124953466 124953504 -15363261 - L2 LINE L2 -97 3216 3179 901 216 143 27 chr10 124953657 124953728 -15363037 - AluJo SINE Alu -19 293 232 2156 204 139 66 chr10 124953728 124954498 -15362267 + LTR1B LTR ERV1 1 826 0 901 216 143 27 chr10 124954498 124954685 -15362080 - AluJo SINE Alu -80 232 5 1400 112 65 0 chr10 124954689 124954903 -15361862 - HSMAR2 DNA Mariner -1069 233 6 321 26 0 0 chr10 124954905 124954943 -15361822 + (TG)n Simple_repeat Simple_repeat 2 39 0 1237 201 0 20 chr10 124955400 124955644 -15361121 - AluJo SINE Alu -4 308 70 478 276 138 78 chr10 124956307 124956603 -15360162 + L1ME4a LINE L1 5293 5570 -551 1712 105 0 0 chr10 124956603 124956832 -15359933 - AluSg/x SINE Alu 0 312 84 478 276 138 78 chr10 124956832 124956987 -15359778 + L1ME4a LINE L1 5570 5714 -407 4017 148 25 28 chr10 124956987 124957342 -15359423 + L1MA7 LINE L1 5568 5922 -369 2286 182 78 0 chr10 124957342 124957737 -15359028 - MSTB LTR MaLR 0 426 1 4017 148 25 28 chr10 124957737 124958001 -15358764 + L1MA7 LINE L1 5922 6187 -104 2048 123 0 37 chr10 124958001 124958325 -15358440 - AluSq SINE Alu -1 312 1 4017 148 25 28 chr10 124958325 124958421 -15358344 + L1MA7 LINE L1 6187 6282 -9 478 276 138 78 chr10 124958421 124958634 -15358131 + L1ME4a LINE L1 5714 5998 -123 281 284 0 23 chr10 124958907 124958995 -15357770 + (CATATA)n Simple_repeat Simple_repeat 6 91 0 657 256 0 37 chr10 124959364 124959528 -15357237 + FRAM SINE Alu 1 158 -8 235 269 19 0 chr10 124959528 124959580 -15357185 + G-rich Low_complexity Low_complexity 4 56 0 210 214 36 18 chr10 124959879 124959935 -15356830 + MIR SINE MIR 96 152 -56 25 0 0 0 chr10 124960640 124960665 -15356100 + AT_rich Low_complexity Low_complexity 1 25 0 768 149 15 30 chr10 124961533 124961667 -15355098 - MER4D LTR ERV1 -7 896 765 3391 119 32 60 chr10 124961667 124962230 -15354535 + LTR10B LTR ERV1 1 547 0 726 221 0 8 chr10 124962235 124962366 -15354399 - AluSq/x SINE Alu -181 131 2 377 165 8 75 chr10 124962895 124963022 -15353743 - MER41A LTR ERV1 -9 516 393 1669 107 0 9 chr10 124963023 124963153 -15353612 + AluSq SINE Alu 1 130 -183 209 33 33 0 chr10 124963153 124963183 -15353582 + (TA)n Simple_repeat Simple_repeat 2 32 0 1669 107 0 9 chr10 124963183 124963276 -15353489 + AluSq SINE Alu 130 222 -91 4225 52 12 0 chr10 124963276 124963760 -15353005 + LTR2B LTR ERV1 1 490 0 248 125 0 0 chr10 124963760 124963792 -15352973 + AluSq SINE Alu 219 250 -53 1010 173 0 65 chr10 124963792 124964006 -15352759 + AluSq SINE Alu 85 284 -29 314 234 40 40 chr10 124965278 124965402 -15351363 - Charlie7 DNA MER1_type -1 2611 2488 251 178 37 112 chr10 124965389 124965496 -15351269 - Charlie7 DNA MER1_type -2464 148 50 * 252 86 0 0 chr10 124966289 124966324 -15350441 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 189 172 0 172 chr10 124966333 124966391 -15350374 - L2 LINE L2 0 3272 3225 559 133 11 11 chr10 124969708 124969834 -15346931 - SVA Other Other 0 1386 1291 330 317 14 35 chr10 124970740 124970882 -15345883 + MIR SINE MIR 86 224 -38 308 216 73 45 chr10 124971345 124971460 -15345305 + MIR SINE MIR 28 152 -56 2044 139 0 13 chr10 124971975 124972276 -15344489 + AluSx SINE Alu 1 297 -15 227 255 53 43 chr10 124972300 124972394 -15344371 + MIR SINE MIR 103 197 -65 1828 182 29 34 chr10 124972575 124972955 -15343810 - L1MB5 LINE L1 0 6174 5797 821 263 92 4 chr10 124972990 124973218 -15343547 - MIR SINE MIR 0 262 15 2277 128 55 3 chr10 124973990 124974333 -15342432 - MER46B DNA MER2_type 0 236 1 237 314 68 42 chr10 124974343 124974461 -15342304 + MIR SINE MIR 21 141 -67 189 370 94 17 chr10 124974620 124974801 -15341964 + MIR SINE MIR 62 256 -6 500 260 28 72 chr10 124975324 124975505 -15341260 + MIR SINE MIR 20 192 -70 315 0 0 0 chr10 124975711 124975746 -15341019 + (TG)n Simple_repeat Simple_repeat 2 36 0 1359 113 183 4 chr10 124976547 124976777 -15339988 - AluJo SINE Alu -14 298 28 210 105 0 0 chr10 124978690 124978728 -15338037 + (A)n Simple_repeat Simple_repeat 1 38 0 842 77 47 0 chr10 124978786 124978956 -15337809 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 706 202 11 0 chr10 124978962 124979140 -15337625 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 * 780 149 24 0 chr10 124979097 124979265 -15337500 + (TAGA)n Simple_repeat Simple_repeat 2 173 0 409 279 148 34 chr10 124979311 124979548 -15337217 - L2 LINE L2 -130 3183 2920 306 319 80 0 chr10 124980527 124980665 -15336100 + MIR3 SINE MIR 8 156 -52 863 263 33 7 chr10 124980802 124981076 -15335689 - MER113 DNA MER1_type? -240 281 1 628 200 100 7 chr10 124981127 124981277 -15335488 + MIR SINE MIR 16 179 -83 345 47 0 0 chr10 124981943 124981986 -15334779 + (TG)n Simple_repeat Simple_repeat 1 43 0 853 292 44 0 chr10 124982404 124982654 -15334111 + MIR SINE MIR 2 262 0 2607 132 67 5 chr10 124982703 124983104 -15333661 - MSTA LTR MaLR -2 426 1 2231 212 9 7 chr10 124983106 124983536 -15333229 + MLT1F LTR MaLR 3 433 -109 207 0 0 0 chr10 124985227 124985250 -15331515 + (TC)n Simple_repeat Simple_repeat 2 24 0 205 269 19 0 chr10 124985258 124985310 -15331455 + CT-rich Low_complexity Low_complexity 5 57 0 598 274 158 65 chr10 124985481 124985973 -15330792 - MLT1H LTR MaLR -1 548 11 1195 205 9 27 chr10 124986689 124986913 -15329852 - MER58A DNA MER1_type -4 220 1 199 179 26 0 chr10 124986914 124986953 -15329812 - MIR3 SINE MIR -49 159 120 355 216 26 60 chr10 124987256 124987372 -15329393 - MIR SINE MIR -73 135 24 883 212 42 5 chr10 124987670 124987859 -15328906 + MER6B DNA MER2_type 1 196 -14 227 31 31 0 chr10 124987960 124987992 -15328773 + (CA)n Simple_repeat Simple_repeat 1 33 0 287 250 28 153 chr10 124988564 124988670 -15328095 + MIR SINE MIR 103 180 -82 2219 111 7 0 chr10 124988670 124988967 -15327798 + AluSx SINE Alu 1 299 -13 287 250 28 153 chr10 124988967 124989036 -15327729 + MIR SINE MIR 180 256 -6 189 94 0 0 chr10 124989147 124989179 -15327586 + (A)n Simple_repeat Simple_repeat 1 32 0 710 283 10 69 chr10 124989634 124989924 -15326841 - L2 LINE L2 -13 3259 2987 196 273 13 26 chr10 124989966 124990043 -15326722 - L2 LINE L2 -1006 2308 2233 2098 143 49 35 chr10 124990046 124990416 -15326349 - THE1C LTR MaLR 0 375 1 2053 124 3 3 chr10 124992623 124992913 -15323852 + AluSc SINE Alu 1 290 -19 2147 222 12 20 chr10 124993650 124994145 -15322620 + L1ME1 LINE L1 5670 6160 -6 273 346 168 0 chr10 124994168 124994382 -15322383 + HAL1 LINE L1 1 250 -2257 1239 301 119 14 chr10 124994497 124995135 -15321630 + HAL1 LINE L1 454 1158 -1349 1044 243 52 55 chr10 124995143 124995546 -15321219 + HAL1 LINE L1 1238 1639 -868 324 73 0 0 chr10 124995546 124995587 -15321178 - 5S rRNA rRNA -79 42 2 595 278 54 19 chr10 124995592 124995797 -15320968 + HAL1 LINE L1 1631 1842 -665 464 278 23 46 chr10 124995903 124996076 -15320689 - MER5A DNA MER1_type -3 186 18 3658 171 35 58 chr10 124996171 124996879 -15319886 - L1MB7 LINE L1 -19 6165 5475 231 36 0 0 chr10 124996879 124996907 -15319858 + (TTA)n Simple_repeat Simple_repeat 1 28 0 3658 171 35 58 chr10 124996907 124996976 -15319789 - L1MB7 LINE L1 -709 5475 5406 491 321 77 64 chr10 124997000 124997535 -15319230 - HAL1b LINE L1 -510 838 297 183 80 0 0 chr10 124998164 124998189 -15318576 + (TC)n Simple_repeat Simple_repeat 2 26 0 282 233 165 19 chr10 124998865 124998968 -15317797 + Charlie8 DNA MER1_type 55 172 -2245 838 222 148 32 chr10 124999256 124999567 -15317198 + L1ME3 LINE L1 5814 6160 -2 415 262 86 120 chr10 125001417 125001825 -15314940 + L2 LINE L2 2920 3313 0 477 330 77 6 chr10 125002210 125002392 -15314373 + MIR SINE MIR 42 236 -26 225 261 224 8 chr10 125002784 125002918 -15313847 - MIR SINE MIR -60 202 40 1732 156 59 7 chr10 125004236 125004525 -15312240 - AluJb SINE Alu -8 304 1 282 303 0 0 chr10 125005236 125005312 -15311453 - L2 LINE L2 -4 3268 3193 405 277 174 20 chr10 125005725 125005920 -15310845 - MIR SINE MIR -17 245 21 1570 201 109 14 chr10 125006096 125006518 -15310247 - LTR40b LTR ERVL 0 462 1 912 224 55 5 chr10 125006526 125006727 -15310038 - MIR SINE MIR -24 238 28 259 246 288 8 chr10 125006822 125006940 -15309825 - MER5A DNA MER1_type 0 189 39 388 289 82 30 chr10 125006954 125007089 -15309676 + L2 LINE L2 3170 3311 -2 261 285 258 7 chr10 125007734 125007885 -15308880 - MER5A DNA MER1_type 0 189 1 242 324 49 20 chr10 125007914 125008016 -15308749 + MIR SINE MIR 46 150 -112 2418 93 0 0 chr10 125008376 125008677 -15308088 + AluSc SINE Alu 1 301 -8 379 222 60 8 chr10 125008754 125008871 -15307894 + LTR16A1 LTR ERVL 333 455 -2 283 315 55 0 chr10 125008910 125009037 -15307728 + L2 LINE L2 1879 2012 -1302 184 324 29 0 chr10 125009043 125009111 -15307654 + L2 LINE L2 2241 2310 -1004 838 253 119 30 chr10 125009736 125010139 -15306626 + MLT1J1 LTR MaLR 1 439 -7 234 325 104 0 chr10 125010564 125010641 -15306124 + L2 LINE L2 3177 3261 -11 1950 146 0 48 chr10 125015042 125015358 -15301407 + AluSx SINE Alu 7 307 -5 359 189 22 78 chr10 125017636 125017726 -15299039 - L2 LINE L2 -3 3310 3226 301 278 75 8 chr10 125018186 125018319 -15298446 - MLT1I LTR MaLR -197 212 71 22 56 0 0 chr10 125019581 125019617 -15297148 + AT_rich Low_complexity Low_complexity 1 36 0 268 233 12 23 chr10 125021536 125021622 -15295143 + (TA)n Simple_repeat Simple_repeat 2 86 0 21 0 0 0 chr10 125024293 125024314 -15292451 + AT_rich Low_complexity Low_complexity 1 21 0 77 12 0 0 chr10 125025083 125025167 -15291598 + AT_rich Low_complexity Low_complexity 1 84 0 180 0 0 0 chr10 125025729 125025749 -15291016 + (TG)n Simple_repeat Simple_repeat 1 20 0 204 40 0 0 chr10 125026570 125026595 -15290170 + (A)n Simple_repeat Simple_repeat 1 25 0 937 215 54 26 chr10 125026961 125027649 -15289116 + L1MD3 LINE L1 7170 7983 -12 2775 167 27 42 chr10 125029112 125029711 -15287054 + L1MB3 LINE L1 5593 6182 -1 216 67 0 0 chr10 125029845 125029875 -15286890 + (CA)n Simple_repeat Simple_repeat 1 30 0 301 132 19 0 chr10 125030928 125030981 -15285784 - L1ME4a LINE L1 -9 6112 6059 302 356 93 19 chr10 125031135 125031351 -15285414 - MIR SINE MIR -10 252 21 571 311 92 0 chr10 125031380 125031608 -15285157 - MIR SINE MIR 0 262 14 210 306 32 0 chr10 125032548 125032610 -15284155 + MER5C DNA MER1_type 13 76 -248 900 179 0 25 chr10 125032666 125032828 -15283937 + FRAM SINE Alu 5 162 -14 522 187 321 8 chr10 125033196 125033330 -15283435 + MER5A DNA MER1_type 1 176 -13 2234 98 3 3 chr10 125033342 125033638 -15283127 - AluSc SINE Alu -13 296 1 198 274 78 78 chr10 125033720 125033965 -15282800 + L2 LINE L2 2152 2396 -918 192 306 71 24 chr10 125034838 125034923 -15281842 + L2 LINE L2 3190 3278 -35 203 274 248 20 chr10 125035281 125035434 -15281331 + MIR3 SINE MIR 16 203 -5 439 272 74 51 chr10 125035630 125035866 -15280899 + MIR SINE MIR 5 249 -13 216 0 0 0 chr10 125036691 125036715 -15280050 + (TA)n Simple_repeat Simple_repeat 1 24 0 2254 130 7 0 chr10 125036743 125037050 -15279715 + AluSg SINE Alu 1 309 -1 269 366 78 7 chr10 125037081 125037219 -15279546 + MIR SINE MIR 18 163 -70 223 258 47 16 chr10 125037304 125037432 -15279333 + C-rich Low_complexity Low_complexity 3 134 0 210 37 0 0 chr10 125037512 125037539 -15279226 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 991 324 77 34 chr10 125039061 125039760 -15277005 + L2 LINE L2 2342 3070 -243 694 290 98 0 chr10 125042476 125042690 -15274075 + MIR SINE MIR 18 252 -10 663 238 17 17 chr10 125042912 125043084 -15273681 + MER69A DNA AcHobo 5 176 -1 350 226 43 21 chr10 125043396 125043489 -15273276 - L2 LINE L2 -15 3298 3204 395 296 124 35 chr10 125045169 125045338 -15271427 + MIR3 SINE MIR 18 201 -7 21 0 0 0 chr10 125046964 125046985 -15269780 + GC_rich Low_complexity Low_complexity 1 21 0 204 235 0 20 chr10 125047297 125047348 -15269417 + CT-rich Low_complexity Low_complexity 3 52 0 308 250 121 0 chr10 125047557 125047673 -15269092 - L2 LINE L2 -1 3312 3183 253 160 0 0 chr10 125047954 125048004 -15268761 + Alu SINE Alu 253 302 0 900 200 140 4 chr10 125048008 125048243 -15268522 + Tigger7 DNA MER2_type 1 267 -466 435 161 54 11 chr10 125048242 125048335 -15268430 + Tigger7 DNA MER2_type 2491 2587 0 * 1141 219 28 85 chr10 125048847 125049236 -15267529 - MLT1B LTR MaLR -23 367 1 2290 96 0 10 chr10 125049346 125049647 -15267118 + AluSq SINE Alu 1 298 -15 339 25 0 0 chr10 125050673 125050713 -15266052 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2108 85 0 11 chr10 125050714 125050996 -15265769 - AluY SINE Alu -32 279 1 453 254 175 42 chr10 125051242 125051459 -15265306 - MIR SINE MIR -15 247 2 255 296 14 0 chr10 125051750 125051821 -15264944 + MIR SINE MIR 185 256 -6 181 368 138 0 chr10 125051906 125051993 -15264772 - L2 LINE L2 -21 3251 3153 213 341 68 11 chr10 125052091 125052179 -15264586 + L2 LINE L2 2929 3021 -251 864 300 51 19 chr10 125052200 125052228 -15264537 - L1ME LINE L1 -4286 1975 1949 2562 44 3 0 chr10 125052228 125052524 -15264241 - AluY SINE Alu -14 297 1 864 300 51 19 chr10 125052524 125052969 -15263796 - L1ME LINE L1 -4312 1949 1487 2489 206 60 45 chr10 125052974 125053470 -15263295 - L1ME1 LINE L1 -5 6956 6469 2488 64 0 0 chr10 125053470 125053765 -15263000 + AluY SINE Alu 1 295 -16 2489 206 60 45 chr10 125053765 125054179 -15262586 - L1ME1 LINE L1 -492 6469 5850 752 131 0 110 chr10 125054196 125054341 -15262424 - FRAM SINE Alu -11 165 37 2163 209 65 20 chr10 125054400 125055092 -15261673 - L1ME1 LINE L1 -1096 5845 5123 1153 253 55 44 chr10 125055108 125055552 -15261213 - L1ME1 LINE L1 -3461 3480 3063 1458 164 77 49 chr10 125055552 125055839 -15260926 + AluJo SINE Alu 1 295 -17 1153 253 55 44 chr10 125055839 125056022 -15260743 - L1ME1 LINE L1 -3878 3063 2883 519 254 45 18 chr10 125056005 125056225 -15260540 - L1ME1 LINE L1 -6181 242 17 * 1612 256 63 76 chr10 125056228 125056656 -15260109 - L1ME LINE L1 -4620 1460 1028 806 154 0 23 chr10 125056656 125056786 -15259979 + FLAM_C SINE Alu 1 127 -6 1612 256 63 76 chr10 125056786 125057822 -15258943 - L1ME LINE L1 -5052 1028 27 21 0 0 0 chr10 125058226 125058247 -15258518 + AT_rich Low_complexity Low_complexity 1 21 0 184 314 0 0 chr10 125058393 125058444 -15258321 - L2 LINE L2 -86 3186 3136 1660 59 5 0 chr10 125058515 125058734 -15258031 + L1PA13 LINE L1 5942 6161 -2 208 274 20 0 chr10 125058984 125059035 -15257730 + MIR3 SINE MIR 108 159 -49 21 36 0 0 chr10 125059398 125059426 -15257339 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr10 125059546 125059574 -15257191 + AT_rich Low_complexity Low_complexity 1 28 0 527 353 54 13 chr10 125059904 125060156 -15256609 - MIR SINE MIR 0 262 3 392 252 28 9 chr10 125060206 125060313 -15256452 - MIR SINE MIR -17 245 137 202 200 22 0 chr10 125060319 125060364 -15256401 - MIR SINE MIR -94 168 123 311 277 42 67 chr10 125061561 125061680 -15255085 + MIR SINE MIR 75 190 -72 263 219 43 85 chr10 125062105 125062269 -15254496 + L1ME4a LINE L1 5954 6110 -11 189 74 0 0 chr10 125062286 125062313 -15254452 + (A)n Simple_repeat Simple_repeat 1 27 0 39 38 0 0 chr10 125062314 125062367 -15254398 + AT_rich Low_complexity Low_complexity 1 53 0 519 96 0 0 chr10 125064359 125064442 -15252323 + (TG)n Simple_repeat Simple_repeat 2 84 0 1181 119 0 0 chr10 125064860 125065019 -15251746 + AluSg/x SINE Alu 132 290 -22 1003 148 62 34 chr10 125065022 125065231 -15251534 + L1MB8 LINE L1 5964 6178 0 262 316 147 0 chr10 125067249 125067344 -15249421 + L2 LINE L2 3155 3263 -9 193 232 105 53 chr10 125067587 125067682 -15249083 + MIR SINE MIR 157 256 -6 833 236 0 20 chr10 125068147 125068342 -15248423 + MER58A DNA MER1_type 30 220 -4 577 263 197 10 chr10 125068346 125068544 -15248221 + MIR SINE MIR 17 251 -11 1917 222 47 15 chr10 125068627 125069159 -15247606 - MER74A LTR ERVL 0 558 10 280 216 49 20 chr10 125069182 125069284 -15247481 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 315 0 0 0 chr10 125069315 125069350 -15247415 + (CA)n Simple_repeat Simple_repeat 2 36 0 544 266 6 40 chr10 125069779 125069952 -15246813 + L2 LINE L2 3146 3312 -1 2637 271 56 19 chr10 125070240 125071278 -15245487 + L1ME LINE L1 46 1120 -4960 2546 61 0 0 chr10 125071576 125071873 -15244892 - AluY SINE Alu -13 298 2 825 186 76 0 chr10 125072035 125072207 -15244558 + FAM SINE Alu 1 49 0 786 179 14 7 chr10 125072219 125072499 -15244266 + GA-rich Low_complexity Low_complexity 1 281 0 2565 62 0 0 chr10 125072591 125072897 -15243868 - AluY SINE Alu -5 306 1 569 253 118 36 chr10 125072909 125073359 -15243406 - L1M4 LINE L1 -743 5403 4917 234 269 121 53 chr10 125073365 125073647 -15243118 - L1M4 LINE L1 -1561 4585 4285 312 254 0 0 chr10 125074624 125074695 -15242070 - MIR SINE MIR -5 257 187 1501 249 65 14 chr10 125074696 125075185 -15241580 - LTR33 LTR ERVL -2 519 6 573 213 47 60 chr10 125075186 125075336 -15241429 - MIR SINE MIR -78 184 37 220 308 67 97 chr10 125076151 125076450 -15240315 + L2 LINE L2 2887 3176 -96 24 0 0 0 chr10 125078922 125078946 -15237819 + AT_rich Low_complexity Low_complexity 1 24 0 231 384 61 0 chr10 125078998 125079097 -15237668 + L2 LINE L2 3126 3230 -42 351 0 0 0 chr10 125079108 125079147 -15237618 + (CA)n Simple_repeat Simple_repeat 1 39 0 1394 217 26 33 chr10 125080190 125080494 -15236271 + AluJb SINE Alu 1 302 -10 338 304 143 0 chr10 125081374 125081499 -15235266 + MIR SINE MIR 22 161 -62 2131 137 7 0 chr10 125081503 125081795 -15234970 - AluSx SINE Alu -17 295 2 421 310 170 0 chr10 125081833 125082004 -15234761 - MIR SINE MIR 0 262 63 25 51 0 0 chr10 125082662 125082701 -15234064 + AT_rich Low_complexity Low_complexity 1 39 0 525 105 0 0 chr10 125083468 125083554 -15233211 + (GGAA)n Simple_repeat Simple_repeat 2 87 0 1874 176 3 3 chr10 125084276 125084682 -15232083 - AluJo SINE Alu 0 406 1 550 226 20 0 chr10 125084688 125084790 -15231975 - MER5A DNA MER1_type -77 112 9 216 0 0 0 chr10 125084854 125084878 -15231887 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1837 107 23 8 chr10 125084884 125085146 -15231619 - AluSg SINE Alu -44 266 1 222 118 0 0 chr10 125085399 125085433 -15231332 + (AATTG)n Simple_repeat Simple_repeat 5 38 0 376 223 75 0 chr10 125087850 125087944 -15228821 + MER5A DNA MER1_type 9 109 -80 490 246 90 8 chr10 125088290 125088424 -15228341 + MIR SINE MIR 11 155 -107 197 332 126 73 chr10 125088458 125088705 -15228060 - L2 LINE L2 -17 3255 2996 276 311 128 0 chr10 125088853 125089001 -15227764 + L1MEd LINE L1 85 251 -5868 183 363 113 31 chr10 125089136 125089296 -15227469 - L2 LINE L2 -575 2739 2567 301 260 29 29 chr10 125089798 125089902 -15226863 + MER5A DNA MER1_type 9 112 -77 382 187 93 0 chr10 125090513 125090588 -15226177 - L2 LINE L2 0 3313 3232 236 299 0 30 chr10 125092085 125092152 -15224613 + MIR SINE MIR 14 78 -184 435 187 9 19 chr10 125092202 125092309 -15224456 - L1MB4 LINE L1 -2 6178 6073 312 27 0 0 chr10 125092309 125092346 -15224419 + (TG)n Simple_repeat Simple_repeat 1 37 0 4419 198 46 19 chr10 125092483 125092989 -15223776 - L1MB4 LINE L1 0 6180 5689 1510 154 117 7 chr10 125092989 125093262 -15223503 - AluJb SINE Alu -5 307 5 4419 198 46 19 chr10 125093262 125093328 -15223437 - L1MB4 LINE L1 -491 5689 5626 1784 182 35 22 chr10 125093328 125093697 -15223068 + MLT1A2 LTR MaLR 1 374 0 4419 198 46 19 chr10 125093697 125095190 -15221575 - L1MB4 LINE L1 -554 5626 4071 621 239 21 58 chr10 125095341 125095584 -15221181 - L1ME3A LINE L1 -66 6104 5871 * 3317 156 130 111 chr10 125095578 125096072 -15220693 - L1MC3 LINE L1 -89 7696 7213 313 256 11 11 chr10 125096072 125096162 -15220603 - MLT1F1 LTR MaLR -443 124 35 3317 156 130 111 chr10 125096162 125096399 -15220366 - L1MC3 LINE L1 -572 7213 6982 1592 211 36 11 chr10 125096399 125096760 -15220005 + MLT1A2 LTR MaLR 5 374 0 3317 156 130 111 chr10 125096760 125097021 -15219744 - L1MC3 LINE L1 -803 6982 6593 415 273 63 7 chr10 125097389 125097532 -15219233 - MIR SINE MIR -56 206 56 195 180 0 80 chr10 125098243 125098293 -15218472 - MIR SINE MIR -101 161 116 180 0 0 0 chr10 125100291 125100311 -15216454 + (TTG)n Simple_repeat Simple_repeat 2 21 0 483 239 8 39 chr10 125100733 125100863 -15215902 + L2 LINE L2 3188 3313 0 289 264 32 147 chr10 125100949 125101177 -15215588 + MIR SINE MIR 25 234 -28 2152 107 0 0 chr10 125101464 125101745 -15215020 + AluSp SINE Alu 33 313 0 263 81 0 0 chr10 125103212 125103249 -15213516 + MER53 DNA DNA 22 58 -131 231 195 0 0 chr10 125103389 125103430 -15213335 - MIR SINE MIR -21 241 201 23 78 0 0 chr10 125103430 125103481 -15213284 + AT_rich Low_complexity Low_complexity 1 51 0 325 157 148 17 chr10 125103619 125103734 -15213031 - L1ME4a LINE L1 -1 6120 5991 225 169 0 119 chr10 125103960 125103994 -15212771 + L2 LINE L2 3262 3288 -25 2474 68 0 13 chr10 125103994 125104304 -15212461 - AluY SINE Alu -5 306 1 225 169 0 119 chr10 125104304 125104328 -15212437 + L2 LINE L2 3288 3313 0 471 271 68 0 chr10 125105271 125105404 -15211361 - MIR SINE MIR -11 251 110 1517 136 56 8 chr10 125105423 125105674 -15211091 + AluJb SINE Alu 1 263 -49 1674 175 68 43 chr10 125105743 125106229 -15210536 - Charlie1 DNA MER1_type 0 2761 2264 3158 215 130 15 chr10 125106234 125107710 -15209055 - L1ME1 LINE L1 -2 6164 4527 814 191 112 0 chr10 125107710 125107898 -15208867 + MER58C DNA MER1_type 1 209 -6 344 196 137 0 chr10 125107914 125108016 -15208749 - L1ME1 LINE L1 -1622 4524 4409 183 87 0 0 chr10 125108021 125108044 -15208721 - MER5A DNA MER1_type -166 23 1 375 360 105 13 chr10 125108112 125108351 -15208414 - L2 LINE L2 -615 2699 2439 372 22 0 0 chr10 125109360 125109405 -15207360 + (TA)n Simple_repeat Simple_repeat 1 45 0 405 293 30 24 chr10 125110758 125110922 -15205843 + L2 LINE L2 3149 3313 0 205 346 0 13 chr10 125113847 125113925 -15202840 - L2 LINE L2 0 3272 3196 243 169 0 0 chr10 125114012 125114083 -15202682 + (TGAG)n Simple_repeat Simple_repeat 4 74 0 531 98 20 20 chr10 125114586 125114688 -15202077 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 238 343 50 109 chr10 125114906 125115107 -15201658 - L2 LINE L2 -78 3194 3006 1309 248 46 33 chr10 125116000 125116455 -15200310 - MLT1C LTR MaLR 0 467 7 281 324 90 14 chr10 125116603 125116748 -15200017 - MIR3 SINE MIR -30 178 23 195 42 0 0 chr10 125117870 125117894 -15198871 + (T)n Simple_repeat Simple_repeat 1 24 0 408 97 0 0 chr10 125119376 125119438 -15197327 + (TG)n Simple_repeat Simple_repeat 2 63 0 25 31 0 0 chr10 125121069 125121101 -15195664 + AT_rich Low_complexity Low_complexity 1 32 0 694 247 73 11 chr10 125122109 125122287 -15194478 - MER5A DNA MER1_type 0 189 1 434 302 99 6 chr10 125122547 125122729 -15194036 + MIR SINE MIR 37 235 -27 32 26 0 0 chr10 125123163 125123202 -15193563 + AT_rich Low_complexity Low_complexity 1 39 0 967 214 5 40 chr10 125123634 125123858 -15192907 - MER20 DNA MER1_type -1 218 3 3384 62 9 0 chr10 125125069 125125505 -15191260 + L1PA5 LINE L1 5709 6148 -6 21 0 0 0 chr10 125125505 125125526 -15191239 + AT_rich Low_complexity Low_complexity 1 21 0 289 271 99 26 chr10 125125694 125125845 -15190920 - L2 LINE L2 -48 3265 3104 685 202 295 12 chr10 125125855 125126113 -15190652 + MER58D DNA MER1_type 1 331 -55 241 234 0 0 chr10 125126200 125126247 -15190518 - L2 LINE L2 -261 3052 3006 208 199 206 81 chr10 125126213 125126349 -15190416 + MIR3 SINE MIR 13 165 -43 * 21 0 0 0 chr10 125127873 125127894 -15188871 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 125128508 125128531 -15188234 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 125129059 125129088 -15187677 + AT_rich Low_complexity Low_complexity 1 29 0 535 286 54 0 chr10 125129329 125129497 -15187268 + MIR SINE MIR 2 178 -84 301 303 0 22 chr10 125129512 125129601 -15187164 - L1MC4 LINE L1 -1339 6703 6617 351 232 34 23 chr10 125129605 125130043 -15186722 + (TA)n Simple_repeat Simple_repeat 1 442 0 219 239 37 28 chr10 125129990 125130099 -15186666 + (TATATG)n Simple_repeat Simple_repeat 4 113 0 * 376 340 61 14 chr10 125130293 125130440 -15186325 - L2 LINE L2 0 3272 3119 3803 151 30 14 chr10 125131274 125131998 -15184767 - L1MA7 LINE L1 0 6291 5556 183 184 0 0 chr10 125132178 125132216 -15184549 + (TA)n Simple_repeat Simple_repeat 1 38 0 420 279 55 48 chr10 125134410 125134575 -15182190 - MIR SINE MIR -19 243 78 252 0 0 0 chr10 125134594 125134622 -15182143 + (CA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 125134821 125134843 -15181922 + AT_rich Low_complexity Low_complexity 1 22 0 474 296 25 10 chr10 125134883 125135079 -15181686 - L1ME LINE L1 -392 5729 5531 3308 84 13 7 chr10 125135182 125135644 -15181121 + L1PA14 LINE L1 5680 6144 -17 22 0 0 0 chr10 125135649 125135671 -15181094 + AT_rich Low_complexity Low_complexity 1 22 0 22 88 0 0 chr10 125135882 125135939 -15180826 + AT_rich Low_complexity Low_complexity 1 57 0 309 320 109 28 chr10 125136227 125136642 -15180123 - L1ME LINE L1 -1314 4832 4384 226 279 9 9 chr10 125136788 125136899 -15179866 + (TA)n Simple_repeat Simple_repeat 2 112 0 500 260 58 118 chr10 125137286 125137632 -15179133 - MLT1J LTR MaLR -128 383 59 2268 157 17 19 chr10 125137803 125138216 -15178549 - MSTB LTR MaLR 0 426 15 313 312 130 7 chr10 125138542 125138696 -15178069 - L1ME LINE L1 -2313 3833 3661 1225 25 6 0 chr10 125138875 125139032 -15177733 - L1P LINE L1 -4114 2032 1875 4681 17 0 0 chr10 125139032 125139569 -15177196 + L1PA2 LINE L1 5619 6155 0 24 53 0 0 chr10 125139715 125139753 -15177012 + AT_rich Low_complexity Low_complexity 1 38 0 328 353 50 5 chr10 125139765 125139966 -15176799 - L1ME LINE L1 -2869 3277 3068 321 238 138 62 chr10 125140340 125140580 -15176185 - L1 LINE L1 -3655 2491 2234 212 303 15 15 chr10 125140678 125140744 -15176021 - L2 LINE L2 -3 3310 3245 2196 115 28 28 chr10 125140795 125141159 -15175606 + THE1B LTR MaLR 1 364 0 259 231 20 0 chr10 125141233 125141301 -15175464 + MIR SINE MIR 99 166 -65 456 334 190 21 chr10 125141814 125142484 -15174281 + L2 LINE L2 2148 2930 -384 246 208 0 0 chr10 125143022 125143075 -15173690 + CT-rich Low_complexity Low_complexity 2 54 0 1412 189 52 36 chr10 125143234 125143541 -15173224 - AluJo SINE Alu 0 312 1 210 364 119 17 chr10 125145215 125145391 -15171374 + L2 LINE L2 3078 3271 -1 1109 105 29 0 chr10 125145666 125145838 -15170927 + L1PA11 LINE L1 5998 6174 0 216 0 0 0 chr10 125146009 125146033 -15170732 + (T)n Simple_repeat Simple_repeat 1 24 0 319 103 0 73 chr10 125146489 125146557 -15170208 + MER53 DNA DNA 93 155 -34 * 373 136 91 57 chr10 125146505 125146593 -15170172 - MER53 DNA DNA -98 91 1 243 288 0 14 chr10 125147180 125147253 -15169512 - MLT1J LTR MaLR -195 316 245 275 345 69 21 chr10 125147478 125147623 -15169142 + MIR3 SINE MIR 19 170 -38 1539 182 0 22 chr10 125147924 125148199 -15168566 + AluSx SINE Alu 33 301 -11 2240 100 0 10 chr10 125149730 125150029 -15166736 + AluSg SINE Alu 1 296 -14 236 330 11 11 chr10 125150047 125150138 -15166627 + MIR3 SINE MIR 118 208 0 458 252 170 0 chr10 125151073 125151208 -15165557 - MIR3 SINE MIR -9 199 42 290 338 25 30 chr10 125151213 125151414 -15165351 + MER112 DNA MER1_type 1 200 -60 1510 201 13 30 chr10 125151509 125151813 -15164952 + AluJo SINE Alu 1 299 -13 182 211 155 14 chr10 125154247 125154318 -15162447 + MIR SINE MIR 117 197 -65 593 261 108 65 chr10 125154552 125155104 -15161661 + L2 LINE L2 2560 3313 0 1135 237 9 56 chr10 125155611 125155948 -15160817 - MER46C DNA MER2_type 0 338 18 395 184 53 0 chr10 125155951 125156027 -15160738 + MER94 DNA DNA 1 80 -54 351 298 34 96 chr10 125157053 125157345 -15159420 + HAL1b LINE L1 1 274 -1074 462 143 0 0 chr10 125157351 125157428 -15159337 + (GGAA)n Simple_repeat Simple_repeat 2 78 0 424 340 107 11 chr10 125157429 125157811 -15158954 + HAL1b LINE L1 279 697 -651 1393 276 52 14 chr10 125157812 125158330 -15158435 + L1MC4a LINE L1 6483 7020 -788 598 179 155 61 chr10 125158297 125158594 -15158171 + L1MC5 LINE L1 7463 7787 -174 * 975 141 0 0 chr10 125158612 125158761 -15158004 + FRAM SINE Alu 28 176 0 256 231 0 0 chr10 125158871 125158923 -15157842 + MER94 DNA DNA 67 118 -16 461 296 123 0 chr10 125160435 125160614 -15156151 + MIR SINE MIR 6 206 -56 411 21 0 0 chr10 125161288 125161336 -15155429 + (TG)n Simple_repeat Simple_repeat 1 48 0 350 317 78 49 chr10 125161472 125161715 -15155050 - MIR SINE MIR 0 262 13 721 243 25 38 chr10 125162863 125163102 -15153663 + MIR SINE MIR 24 259 -3 184 275 0 29 chr10 125163659 125163728 -15153037 - L2 LINE L2 -189 3083 3017 251 256 212 34 chr10 125165073 125165455 -15151310 + L1M4 LINE L1 4614 5063 -1083 345 267 48 47 chr10 125165553 125165865 -15150900 + L1P1 LINE L1 5219 5537 -618 25 83 0 0 chr10 125165875 125165935 -15150830 + AT_rich Low_complexity Low_complexity 1 60 0 343 272 103 56 chr10 125166154 125166367 -15150398 + MIR SINE MIR 8 230 -32 1814 178 40 23 chr10 125168042 125168391 -15148374 + MLT1A1 LTR MaLR 1 355 -10 583 233 70 9 chr10 125168638 125168913 -15147852 - LTR16A LTR ERVL -10 440 120 1675 91 64 147 chr10 125169390 125169598 -15147167 - THE1C LTR MaLR 0 375 216 2164 129 3 0 chr10 125169598 125169892 -15146873 + AluSx SINE Alu 1 295 -17 1675 91 64 147 chr10 125169892 125170092 -15146673 - THE1C LTR MaLR -159 216 1 759 146 7 13 chr10 125170482 125170633 -15146132 + GA-rich Low_complexity Low_complexity 3 152 0 187 325 52 57 chr10 125173467 125173679 -15143086 - L2 LINE L2 -93 3179 2969 235 347 66 30 chr10 125173766 125173933 -15142832 - L2 LINE L2 -448 2866 2694 781 160 0 182 chr10 125175631 125175862 -15140903 - MER5A DNA MER1_type 0 189 1 751 136 8 0 chr10 125175957 125176075 -15140690 - FLAM_C SINE Alu -14 119 1 483 243 69 46 chr10 125176919 125177092 -15139673 - MLT1J2 LTR MaLR -7 443 267 354 300 23 37 chr10 125177123 125177306 -15139459 + MIR SINE MIR 12 192 -63 406 283 158 0 chr10 125177328 125177480 -15139285 + MER5A DNA MER1_type 9 184 -5 202 111 0 44 chr10 125178359 125178404 -15138361 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 387 73 0 0 chr10 125178408 125178463 -15138302 + (CA)n Simple_repeat Simple_repeat 2 56 0 231 309 40 69 chr10 125179179 125179354 -15137411 + MIR SINE MIR 8 177 -85 624 204 167 0 chr10 125179420 125179582 -15137183 - MER5A DNA MER1_type 0 189 1 433 264 108 20 chr10 125179698 125179846 -15136919 + MIR SINE MIR 32 192 -70 326 224 0 13 chr10 125179920 125179996 -15136769 + MER116 DNA Mariner 6 80 0 318 258 0 0 chr10 125180654 125180743 -15136022 + (CATATA)n Simple_repeat Simple_repeat 3 91 0 386 266 79 7 chr10 125180749 125180888 -15135877 + L1ME4a LINE L1 4015 4163 -1983 807 213 0 30 chr10 125180918 125181082 -15135683 - FRAM SINE Alu -17 159 1 234 301 96 28 chr10 125181339 125181588 -15135177 + L1ME4a LINE L1 4501 4766 -1380 26 0 0 0 chr10 125181869 125181895 -15134870 + AT_rich Low_complexity Low_complexity 1 26 0 847 279 87 22 chr10 125182005 125182434 -15134331 + L1ME4a LINE L1 5284 5735 -386 975 176 11 16 chr10 125182500 125182687 -15134078 - MER5A DNA MER1_type -3 186 1 275 327 119 0 chr10 125182698 125182857 -15133908 + L1ME4a LINE L1 5870 6047 -74 25 0 0 0 chr10 125182869 125182894 -15133871 + AT_rich Low_complexity Low_complexity 1 25 0 1624 160 19 22 chr10 125183026 125183345 -15133420 - L1MB8 LINE L1 -2 6176 5859 2109 99 90 38 chr10 125184656 125185001 -15131764 + THE1B LTR MaLR 1 363 -1 205 191 64 0 chr10 125185084 125185131 -15131634 + CT-rich Low_complexity Low_complexity 3 52 0 5025 67 2 0 chr10 125185672 125186299 -15130466 + L1PA8 LINE L1 5531 6158 -14 21 0 0 0 chr10 125186299 125186320 -15130445 + AT_rich Low_complexity Low_complexity 1 21 0 180 194 0 0 chr10 125186756 125186792 -15129973 + MIR SINE MIR 154 189 -73 320 274 68 34 chr10 125186813 125186959 -15129806 - MIR SINE MIR -6 256 106 192 158 0 0 chr10 125187834 125187872 -15128893 + (GACTG)n Simple_repeat Simple_repeat 5 42 0 1408 264 165 0 chr10 125189138 125189635 -15127130 - L1ME3A LINE L1 0 6170 5592 391 307 89 13 chr10 125189937 125190162 -15126603 + MIR SINE MIR 3 244 -18 212 303 34 11 chr10 125190250 125190339 -15126426 - MIR3 SINE MIR -6 202 112 684 162 23 3 chr10 125190557 125190868 -15125897 + (CA)n Simple_repeat Simple_repeat 1 317 0 221 187 13 0 chr10 125190893 125190968 -15125797 + (CA)n Simple_repeat Simple_repeat 1 76 0 331 281 50 8 chr10 125191014 125191135 -15125630 - MIR SINE MIR -118 144 19 345 309 124 28 chr10 125191876 125191932 -15124833 - MER91A DNA MER1_type 0 196 147 3503 223 33 23 chr10 125191932 125192750 -15124015 - LTR1B LTR ERV1 0 826 1 345 309 124 28 chr10 125192750 125192871 -15123894 - MER91A DNA MER1_type -49 147 2 1174 221 90 29 chr10 125193655 125193876 -15122889 - MLT1F LTR MaLR -211 331 125 1958 154 76 15 chr10 125193876 125194219 -15122546 + THE1B LTR MaLR 1 364 0 12110 79 13 3 chr10 125194219 125195783 -15120982 + THE1B-int LTR MaLR 1 1580 0 2180 110 104 18 chr10 125195783 125196118 -15120647 + THE1B LTR MaLR 1 364 0 1174 221 90 29 chr10 125196118 125196206 -15120559 - MLT1F LTR MaLR -416 126 1 533 261 0 0 chr10 125196616 125196735 -15120030 - MER94 DNA DNA -8 126 8 290 236 193 1 chr10 125198794 125198909 -15117856 + MIR SINE MIR 20 151 -62 237 309 48 34 chr10 125199123 125199330 -15117435 - L1ME4a LINE L1 -181 5940 5731 2405 63 0 3 chr10 125199832 125200140 -15116625 - AluY SINE Alu 0 307 1 1948 224 86 27 chr10 125200242 125200790 -15115975 + MLT1E LTR MaLR 1 580 -13 893 200 34 24 chr10 125201000 125201205 -15115560 - MER3 DNA MER1_type 0 209 3 497 279 52 0 chr10 125202569 125202741 -15114024 + MIR SINE MIR 20 200 -62 2890 68 0 0 chr10 125202858 125203213 -15113552 + THE1A LTR MaLR 1 355 0 26 0 0 0 chr10 125203436 125203462 -15113303 + AT_rich Low_complexity Low_complexity 1 26 0 494 310 119 33 chr10 125203500 125203835 -15112930 - MLT1K LTR MaLR -123 465 102 254 307 13 0 chr10 125203918 125203993 -15112772 + L2 LINE L2 3197 3272 0 454 43 29 0 chr10 125204469 125204538 -15112227 + (TG)n Simple_repeat Simple_repeat 2 72 0 2105 120 0 0 chr10 125205290 125205573 -15111192 + AluSx SINE Alu 1 283 -29 379 0 0 0 chr10 125205573 125205615 -15111150 + (TAAA)n Simple_repeat Simple_repeat 2 156 0 211 255 0 39 chr10 125205655 125205706 -15111059 + L2 LINE L2 3254 3302 -11 445 328 38 11 chr10 125206252 125206438 -15110327 - MIR SINE MIR -50 212 22 256 275 0 0 chr10 125207831 125207900 -15108865 + L2 LINE L2 2902 2970 -302 * 526 338 115 8 chr10 125207899 125208133 -15108632 - MIR SINE MIR -2 260 2 387 310 74 77 chr10 125208133 125208443 -15108322 + L2 LINE L2 2954 3262 -10 1835 178 13 3 chr10 125208466 125208866 -15107899 + AluJb SINE Alu 1 403 0 245 91 0 0 chr10 125208868 125208901 -15107864 + U2 snRNA snRNA 1 33 -155 414 227 28 0 chr10 125208903 125209044 -15107721 + GA-rich Low_complexity Low_complexity 4 148 0 501 193 28 28 chr10 125209075 125209251 -15107514 + GA-rich Low_complexity Low_complexity 3 178 0 242 91 0 0 chr10 125209264 125209297 -15107468 + U2 snRNA snRNA 1 33 -155 524 216 0 7 chr10 125209297 125209436 -15107329 + GA-rich Low_complexity Low_complexity 4 141 0 336 230 0 0 chr10 125210449 125210523 -15106242 + MIR SINE MIR 62 135 -73 333 146 60 0 chr10 125210652 125210803 -15105962 + (TA)n Simple_repeat Simple_repeat 2 161 0 307 168 71 0 chr10 125210820 125210933 -15105832 + (TA)n Simple_repeat Simple_repeat 1 121 0 419 114 60 12 chr10 125210933 125211099 -15105666 + (TTATA)n Simple_repeat Simple_repeat 1 174 0 419 166 65 6 chr10 125211105 125211274 -15105491 + (TA)n Simple_repeat Simple_repeat 1 179 0 384 270 103 8 chr10 125211325 125211451 -15105314 - MIR SINE MIR -90 172 35 459 306 82 0 chr10 125211988 125212135 -15104630 - MIR SINE MIR -12 250 92 709 281 57 4 chr10 125212441 125212669 -15104096 + MIR SINE MIR 9 248 -14 24 85 0 0 chr10 125215301 125215360 -15101405 + AT_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr10 125215520 125215544 -15101221 + AT_rich Low_complexity Low_complexity 1 24 0 283 190 17 0 chr10 125215553 125215611 -15101154 - L1ME4a LINE L1 -83 6038 5980 997 284 29 19 chr10 125215681 125215888 -15100877 - L1ME4a LINE L1 -251 5870 5656 2947 123 2 50 chr10 125215888 125216343 -15100422 - Tigger2a DNA MER2_type -1 433 1 997 284 29 19 chr10 125216343 125216512 -15100253 - L1ME4a LINE L1 -465 5656 5490 559 248 115 37 chr10 125217103 125217373 -15099392 - L1ME4a LINE L1 -34 6087 5797 1787 42 0 28 chr10 125217605 125217822 -15098943 + AluY SINE Alu 19 229 -82 1985 68 4 4 chr10 125218776 125219050 -15097715 + AluY SINE Alu 37 310 0 956 292 194 14 chr10 125220438 125221061 -15095704 - L2 LINE L2 -600 2714 1980 307 208 42 0 chr10 125221074 125221146 -15095619 + L1MC/D LINE L1 5689 5763 -2045 3029 143 63 13 chr10 125221163 125221638 -15095127 - MER1A DNA MER1_type 0 529 31 477 286 40 47 chr10 125222230 125222531 -15094234 - HAL1b LINE L1 -535 813 515 1003 246 70 20 chr10 125222537 125222838 -15093927 - LTR16C LTR ERVL -2 489 174 232 317 8 32 chr10 125223159 125223282 -15093483 - HAL1b LINE L1 -1042 306 187 518 224 245 0 chr10 125224202 125224345 -15092420 + MER45A DNA AcHobo 1 178 0 827 182 27 0 chr10 125226866 125227014 -15089751 + MER45A DNA AcHobo 10 161 -17 386 209 155 0 chr10 125227214 125227320 -15089445 - MIR SINE MIR -44 164 39 1825 165 3 7 chr10 125227330 125227621 -15089144 - AluSx SINE Alu -20 292 3 1115 222 23 9 chr10 125227699 125227920 -15088845 - MER58A DNA MER1_type 0 224 1 1197 296 46 20 chr10 125228001 125228497 -15088268 - LTR33 LTR ERVL -2 519 11 2041 143 0 3 chr10 125229083 125229377 -15087388 + AluSx SINE Alu 1 293 -19 816 314 43 39 chr10 125229485 125229978 -15086787 + MLT1J LTR MaLR 9 503 -8 923 206 0 24 chr10 125230038 125230208 -15086557 + MER8 DNA MER2_type 74 239 0 265 274 103 64 chr10 125230333 125230375 -15086390 - MLT1J LTR MaLR -204 307 268 2649 128 62 7 chr10 125230375 125230781 -15085984 + MSTA LTR MaLR 1 428 0 265 274 103 64 chr10 125230781 125230888 -15085877 - MLT1J LTR MaLR -243 268 167 1811 184 82 29 chr10 125230888 125231087 -15085678 + MSTD LTR MaLR 1 188 -208 234 0 0 0 chr10 125231087 125231113 -15085652 + (TCC)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr10 125231115 125231136 -15085629 + (TC)n Simple_repeat Simple_repeat 1 21 0 1811 184 82 29 chr10 125231136 125231309 -15085456 + MSTD LTR MaLR 188 396 0 265 274 103 64 chr10 125231309 125231362 -15085403 - MLT1J LTR MaLR -344 167 96 432 316 0 0 chr10 125231819 125231952 -15084813 - MIR SINE MIR -24 238 106 1027 175 0 0 chr10 125233118 125233278 -15083487 - AluJo SINE Alu -24 288 129 685 171 36 0 chr10 125233299 125233410 -15083355 - AluJo SINE Alu -167 145 31 260 275 43 56 chr10 125233677 125233895 -15082870 - L2 LINE L2 -508 2806 2513 1185 178 82 81 chr10 125234337 125234757 -15082008 + MLT1C LTR MaLR 1 390 0 2437 82 0 0 chr10 125234795 125235087 -15081678 + AluSx SINE Alu 11 302 -10 288 70 0 0 chr10 125235692 125235735 -15081030 + (TC)n Simple_repeat Simple_repeat 1 43 0 258 289 24 0 chr10 125238043 125238126 -15078639 + (TGG)n Simple_repeat Simple_repeat 1 85 0 521 285 40 64 chr10 125238470 125238719 -15078046 + MIR SINE MIR 20 262 0 2933 60 16 5 chr10 125238720 125239090 -15077675 + L1PA8 LINE L1 5793 6166 -6 416 335 51 31 chr10 125239118 125239375 -15077390 + L2 LINE L2 2705 2966 -348 1927 136 23 10 chr10 125239389 125239691 -15077074 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 125239707 125239727 -15077038 + (CA)n Simple_repeat Simple_repeat 2 21 0 1680 202 108 102 chr10 125239730 125240625 -15076140 - L1MC5 LINE L1 -36 7925 7025 612 274 13 70 chr10 125240766 125240996 -15075769 - L1MC5 LINE L1 -1009 6952 6736 281 246 94 36 chr10 125241066 125241082 -15075683 - L1ME LINE L1 -328 5838 5823 604 159 45 115 chr10 125241082 125241339 -15075426 - L1MC5 LINE L1 -455 5711 5606 2717 249 81 51 chr10 125241345 125243444 -15073321 - L1ME LINE L1 -3477 2603 437 2575 56 3 0 chr10 125243444 125243747 -15073018 - AluY SINE Alu -7 304 1 2717 249 81 51 chr10 125243747 125244187 -15072578 - L1ME LINE L1 -5643 437 12 499 233 52 31 chr10 125244182 125244375 -15072390 - L1MC5 LINE L1 -2357 5451 5255 * 29 60 0 0 chr10 125244448 125244498 -15072267 + AT_rich Low_complexity Low_complexity 1 50 0 2450 107 13 61 chr10 125244523 125244915 -15071850 - L1PA11 LINE L1 -2 6172 5800 526 295 30 75 chr10 125244969 125245545 -15071220 - L1MC5 LINE L1 -1006 5140 4591 182 289 19 19 chr10 125245578 125245630 -15071135 + L2 LINE L2 2989 3040 -273 365 207 134 0 chr10 125245756 125245838 -15070927 + MIR3 SINE MIR 63 155 -53 3621 75 18 5 chr10 125245888 125246331 -15070434 + MLT2A2 LTR ERVL 5 453 0 598 258 134 76 chr10 125246540 125246920 -15069845 + MLT1H LTR MaLR 123 524 -25 663 271 103 79 chr10 125247367 125247872 -15068893 + MLT1K LTR MaLR 67 583 -5 213 274 69 29 chr10 125247936 125248038 -15068727 + L2 LINE L2 3158 3263 -9 295 137 59 0 chr10 125248076 125248127 -15068638 + MIR SINE MIR 111 164 -98 22 0 0 0 chr10 125248290 125248312 -15068453 + AT_rich Low_complexity Low_complexity 1 22 0 220 293 20 50 chr10 125249956 125250055 -15066710 + MIR SINE MIR 141 236 -26 338 109 219 0 chr10 125251020 125251084 -15065681 - MADE1 DNA Mariner -2 78 1 34 108 0 0 chr10 125251129 125251268 -15065497 + AT_rich Low_complexity Low_complexity 1 139 0 25 0 0 0 chr10 125251430 125251455 -15065310 + AT_rich Low_complexity Low_complexity 1 25 0 1725 197 0 3 chr10 125251619 125251924 -15064841 - AluJo SINE Alu -8 304 1 219 296 13 7 chr10 125251924 125252003 -15064762 - MIR SINE MIR -66 142 73 22 0 0 0 chr10 125253471 125253493 -15063272 + AT_rich Low_complexity Low_complexity 1 22 0 2323 157 19 16 chr10 125253723 125254087 -15062678 + MLT1A1 LTR MaLR 1 365 0 284 243 37 47 chr10 125254208 125254325 -15062440 + MIR SINE MIR 17 133 -75 2049 112 25 7 chr10 125254497 125254782 -15061983 + AluSp SINE Alu 1 290 -23 185 0 40 0 chr10 125256296 125256321 -15060444 + (TG)n Simple_repeat Simple_repeat 2 27 0 3814 213 28 36 chr10 125257049 125258127 -15058638 - L1ME3 LINE L1 -11 6962 5888 * 4199 249 84 19 chr10 125258108 125258247 -15058518 - L1ME3 LINE L1 -2184 4773 4644 462 101 51 38 chr10 125258247 125258326 -15058439 - MADE1 DNA Mariner 0 80 1 4199 249 84 19 chr10 125258326 125259788 -15056977 - L1ME3 LINE L1 -2313 4644 3061 2150 156 45 0 chr10 125259788 125260185 -15056580 + L1MA9 LINE L1 5898 6312 0 4199 249 84 19 chr10 125260185 125260219 -15056546 - L1ME3 LINE L1 -3896 3061 3031 321 216 124 31 chr10 125260220 125260317 -15056448 - L1ME3 LINE L1 -3883 3074 2969 1040 214 0 0 chr10 125260317 125260518 -15056247 + MER3 DNA MER1_type 1 201 -8 1650 268 129 32 chr10 125260537 125261792 -15054973 - L1ME3 LINE L1 -4128 3010 1623 1920 123 0 0 chr10 125261792 125262113 -15054652 - AluSx SINE Alu 0 321 1 1650 268 129 32 chr10 125262113 125262146 -15054619 - L1ME3 LINE L1 -5515 1623 1595 1666 167 0 10 chr10 125262170 125262458 -15054307 + AluSx SINE Alu 3 287 -25 330 292 45 52 chr10 125262481 125262635 -15054130 - L1ME3 LINE L1 -5465 1394 1242 341 297 94 86 chr10 125262836 125263186 -15053579 - L1ME3 LINE L1 -5616 1331 979 1235 186 98 5 chr10 125263200 125263496 -15053269 - MER2 DNA MER2_type -8 337 15 460 314 36 59 chr10 125263828 125264048 -15052717 + MIR SINE MIR 20 234 -28 695 291 75 89 chr10 125264670 125265219 -15051546 + L1 LINE L1 3166 3706 -2440 248 325 51 8 chr10 125265224 125265341 -15051424 + L1 LINE L1 3752 3873 -2273 333 303 76 0 chr10 125265366 125265498 -15051267 + MIR SINE MIR 3 144 -118 1470 236 43 63 chr10 125265509 125266001 -15050764 + MER74B LTR ERVL 66 547 -75 328 169 34 56 chr10 125265927 125266016 -15050749 - MER88 LTR ERVL -299 165 79 * 439 248 26 34 chr10 125266061 125266178 -15050587 + MIR SINE MIR 133 248 -14 398 362 121 0 chr10 125266198 125266397 -15050368 + L1 LINE L1 3881 4103 -2043 1063 218 52 118 chr10 125266782 125267223 -15049542 + L1MC4 LINE L1 6287 6783 -1110 3211 193 72 37 chr10 125267236 125268188 -15048577 + L1MC4 LINE L1 7069 8042 0 1275 258 92 73 chr10 125268194 125268767 -15047998 + MLT1G LTR MaLR 7 590 0 489 272 24 8 chr10 125268815 125268940 -15047825 - MIR SINE MIR -79 183 57 359 301 11 0 chr10 125269029 125269122 -15047643 - L2 LINE L2 -55 3258 3165 220 320 48 16 chr10 125269984 125270109 -15046656 - MIR SINE MIR -127 135 7 536 291 64 44 chr10 125270572 125270915 -15045850 + L2 LINE L2 2326 2675 -639 1626 181 23 0 chr10 125270924 125271227 -15045538 - AluJb SINE Alu -2 310 1 739 112 0 0 chr10 125271238 125271336 -15045429 - AluSg/x SINE Alu -14 296 199 187 135 135 0 chr10 125271336 125271373 -15045392 + L2 LINE L2 3233 3274 -39 1617 162 114 37 chr10 125271954 125272385 -15044380 - MER31A LTR ERV1 -1 542 1 219 211 0 0 chr10 125272962 125273000 -15043765 + polypyrimidine Low_complexity Low_complexity 1 38 0 2302 92 3 0 chr10 125273032 125273338 -15043427 + AluSq SINE Alu 1 307 -6 1005 75 0 0 chr10 125273795 125273929 -15042836 + AluSg/x SINE Alu 176 309 -1 494 213 99 71 chr10 125273974 125274185 -15042580 + MLT1K LTR MaLR 372 588 0 629 289 58 10 chr10 125274441 125274649 -15042116 - MIR SINE MIR -5 257 40 350 278 30 11 chr10 125274790 125274902 -15041863 + L1MDa LINE L1 571 987 -5553 472 248 144 26 chr10 125274951 125275104 -15041661 + MIR SINE MIR 7 177 -85 626 223 34 23 chr10 125275283 125275458 -15041307 + MER5B DNA MER1_type 1 177 -1 1471 245 30 5 chr10 125276603 125277003 -15039762 + Charlie4a DNA MER1_type 30 439 -69 2780 213 67 51 chr10 125277005 125277794 -15038971 + L1MDa LINE L1 19 820 -5720 1027 227 40 22 chr10 125278139 125278412 -15038353 + L1M4 LINE L1 3519 3796 -2350 533 200 47 7 chr10 125278791 125278941 -15037824 + Charlie4a DNA MER1_type 280 435 -73 269 109 22 0 chr10 125279025 125279071 -15037694 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5002 231 57 30 chr10 125279533 125281108 -15035657 + L1M4 LINE L1 2943 4559 -1587 1623 249 43 17 chr10 125281402 125281824 -15034941 + LTR16A LTR ERVL 16 448 -2 1299 139 0 0 chr10 125281967 125282168 -15034597 + AluSq SINE Alu 103 303 -10 3020 280 57 9 chr10 125282416 125283279 -15033486 + HERV16 LTR ERVL 1690 2593 -2403 945 118 0 15 chr10 125284380 125284515 -15032250 - FLAM_C SINE Alu 0 133 1 455 271 0 16 chr10 125284721 125284843 -15031922 + MIR3 SINE MIR 59 178 -30 190 83 0 83 chr10 125285567 125285627 -15031138 + (GGGA)n Simple_repeat Simple_repeat 2 56 0 446 293 7 36 chr10 125285872 125286012 -15030753 + MIR SINE MIR 2 137 -125 980 264 52 4 chr10 125286018 125286324 -15030441 + MLT1H LTR MaLR 5 384 -211 2255 127 17 165 chr10 125286463 125286990 -15029775 + LTR32 LTR ERVL 21 469 -2 369 96 0 0 chr10 125286992 125287044 -15029721 + MLT1H LTR MaLR 497 548 -1 899 155 61 0 chr10 125287133 125287281 -15029484 - LTR32 LTR ERVL -292 179 23 209 132 0 26 chr10 125287287 125287325 -15029440 + (TTA)n Simple_repeat Simple_repeat 3 39 0 369 294 150 12 chr10 125287340 125287500 -15029265 + MIR SINE MIR 7 188 -74 459 0 0 0 chr10 125287860 125287911 -15028854 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 1944 125 0 0 chr10 125287911 125288191 -15028574 - AluSx SINE Alu -32 280 1 414 287 0 9 chr10 125288270 125288378 -15028387 - MER5B DNA MER1_type -67 111 5 652 298 126 0 chr10 125288682 125288920 -15027845 - L2 LINE L2 -40 3273 3006 472 294 67 81 chr10 125289942 125290344 -15026421 + MLT1L LTR MaLR 118 612 -3 207 339 50 38 chr10 125290469 125290708 -15026057 + L2 LINE L2 2546 2787 -527 559 271 138 29 chr10 125290732 125290942 -15025823 + MIR SINE MIR 11 243 -19 239 278 58 78 chr10 125290998 125291132 -15025633 + L2 LINE L2 2864 2994 -278 2171 118 0 0 chr10 125291132 125291436 -15025329 + AluSx SINE Alu 1 304 -8 239 278 58 78 chr10 125291436 125291506 -15025259 + L2 LINE L2 2994 3064 -208 267 292 87 31 chr10 125291974 125292169 -15024596 + LTR33 LTR ERVL 235 440 -81 1575 186 29 10 chr10 125296006 125296312 -15020453 - AluJb SINE Alu 0 312 1 2063 107 0 4 chr10 125296627 125296908 -15019857 - AluSg SINE Alu -30 280 1 599 213 75 75 chr10 125296928 125297102 -15019663 + MER5B DNA MER1_type 5 178 0 184 171 86 0 chr10 125298185 125298220 -15018545 - L2 LINE L2 -14 3299 3262 228 111 0 0 chr10 125298230 125298266 -15018499 + (CA)n Simple_repeat Simple_repeat 1 36 0 1549 175 21 7 chr10 125302171 125302324 -15014441 - AluJb SINE Alu -28 284 124 2254 87 3 0 chr10 125302324 125302624 -15014141 - AluSc SINE Alu -8 301 1 1549 175 21 7 chr10 125302624 125302750 -15014015 - AluJb SINE Alu -188 124 1 333 267 136 42 chr10 125303985 125304221 -15012544 - MIR SINE MIR -3 259 2 5504 91 38 7 chr10 125304446 125305202 -15011563 - LTR17 LTR ERV1 0 780 1 274 294 140 28 chr10 125305946 125306089 -15010676 + MIR SINE MIR 49 207 -55 2008 113 0 3 chr10 125306091 125306394 -15010371 + AluSx SINE Alu 3 304 0 2577 74 0 3 chr10 125307340 125307652 -15009113 + AluY SINE Alu 1 311 0 460 315 17 11 chr10 125308587 125308768 -15007997 + MER5A DNA MER1_type 7 188 -1 267 247 75 33 chr10 125309185 125309327 -15007438 - L1MC/D LINE L1 -413 5757 5610 310 285 18 48 chr10 125310294 125310459 -15006306 + MIR3 SINE MIR 30 189 -19 291 241 221 14 chr10 125311334 125311479 -15005286 + MER5A DNA MER1_type 9 183 -6 369 0 0 0 chr10 125311791 125311832 -15004933 + (TG)n Simple_repeat Simple_repeat 2 42 0 1220 111 22 0 chr10 125312354 125312535 -15004230 - L1PA15 LINE L1 0 6165 5981 2765 176 7 72 chr10 125312870 125313456 -15003309 - MER52A LTR ERV1 0 1755 1208 390 221 23 69 chr10 125313436 125313567 -15003198 - LTR28 LTR ERV1 -310 710 586 * 307 259 82 30 chr10 125313557 125313692 -15003073 - MER52A LTR ERV1 -406 1349 1208 * 1425 177 12 51 chr10 125313718 125314180 -15002585 - MER52A LTR ERV1 -523 1232 651 360 214 27 0 chr10 125314491 125314603 -15002162 + GA-rich Low_complexity Low_complexity 2 116 0 203 283 38 0 chr10 125314624 125314677 -15002088 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 299 208 66 19 chr10 125315100 125315206 -15001559 - MIR SINE MIR -67 141 31 198 283 0 0 chr10 125316801 125316861 -14999904 + MIR SINE MIR 203 262 0 238 308 39 0 chr10 125316906 125316984 -14999781 - MIR SINE MIR -67 141 61 582 219 27 7 chr10 125317180 125317326 -14999439 + MIR SINE MIR 5 153 -109 22921 63 1 2 chr10 125317355 125320146 -14996619 - HERVK9 LTR ERVK -3130 2786 1 3731 104 6 2 chr10 125320146 125320655 -14996110 - MER9 LTR ERVK 0 511 1 237 254 17 0 chr10 125320684 125320743 -14996022 + MIR SINE MIR 203 262 0 2232 115 0 0 chr10 125321501 125321797 -14994968 + AluSx SINE Alu 1 296 -16 2211 128 0 6 chr10 125321870 125322182 -14994583 - AluSx SINE Alu -2 310 1 201 132 0 0 chr10 125322514 125322552 -14994213 + (TA)n Simple_repeat Simple_repeat 2 39 0 223 299 26 0 chr10 125322568 125322645 -14994120 + L3 LINE CR1 1145 1223 -354 201 339 16 63 chr10 125323165 125323292 -14993473 + L3 LINE CR1 879 999 -578 1727 173 3 11 chr10 125323332 125323616 -14993149 - AluJo SINE Alu -30 282 1 360 276 58 68 chr10 125323646 125323940 -14992825 + MLT1K LTR MaLR 188 478 -110 2421 63 33 0 chr10 125324047 125324346 -14992419 + AluY SINE Alu 1 309 -2 2425 81 0 0 chr10 125327054 125327351 -14989414 + AluY SINE Alu 1 297 -14 2392 90 3 0 chr10 125327396 125327695 -14989070 + AluSx SINE Alu 1 300 -12 874 256 102 58 chr10 125327707 125328118 -14988647 + MLT1J2 LTR MaLR 1 429 -21 1635 108 70 51 chr10 125328608 125328922 -14987843 + THE1C LTR MaLR 2 321 -54 316 132 0 0 chr10 125328922 125328975 -14987790 - MADE1 DNA Mariner 0 80 28 334 179 0 0 chr10 125328978 125329034 -14987731 + THE1C LTR MaLR 373 428 0 475 255 45 78 chr10 125329034 125329277 -14987488 + MER76 LTR ERV 424 658 -30 3226 119 53 6 chr10 125329928 125330457 -14986308 + MER41C LTR ERV1 1 554 0 4221 129 15 76 chr10 125330734 125331147 -14985618 - LTR39 LTR ERV1 0 783 439 2308 112 3 0 chr10 125331147 125331451 -14985314 + AluSx SINE Alu 1 305 -7 4221 129 15 76 chr10 125331451 125331822 -14984943 - LTR39 LTR ERV1 -344 439 47 366 267 0 0 chr10 125332315 125332405 -14984360 + MIR SINE MIR 42 131 -77 21 0 0 0 chr10 125332644 125332665 -14984100 + AT_rich Low_complexity Low_complexity 1 21 0 1754 155 75 4 chr10 125332677 125332955 -14983810 + AluSx SINE Alu 3 300 -12 1970 153 0 0 chr10 125332958 125333239 -14983526 + AluSx SINE Alu 1 281 -31 483 277 15 0 chr10 125333254 125333389 -14983376 - MIR SINE MIR -61 147 38 568 221 9 0 chr10 125333474 125333587 -14983178 + MER81 DNA DNA 1 114 0 2119 236 45 14 chr10 125333607 125334183 -14982582 - L1M4 LINE L1 -3199 2947 2354 228 355 28 0 chr10 125335325 125335432 -14981333 - LTR67 LTR ERVL -350 207 98 201 273 0 39 chr10 125335701 125335778 -14980987 + GA-rich Low_complexity Low_complexity 4 77 0 269 22 133 22 chr10 125335793 125335838 -14980927 - MLT2A2 LTR ERVL 0 453 404 1000 151 0 0 chr10 125335838 125335984 -14980781 + AluSp SINE Alu 150 295 -18 463 206 84 38 chr10 125336571 125336702 -14980063 + L1MC4a LINE L1 5674 5810 -1998 196 269 0 0 chr10 125336710 125336762 -14980003 - L2 LINE L2 -693 2621 2570 1868 91 91 0 chr10 125337263 125337515 -14979250 - AluSc SINE Alu -10 299 25 509 143 0 0 chr10 125337592 125337669 -14979096 + MADE1 DNA Mariner 4 80 0 198 283 109 11 chr10 125340199 125340291 -14976474 - MIR3 SINE MIR -42 166 66 1254 208 136 30 chr10 125340463 125340938 -14975827 + L1MC4a LINE L1 5818 6356 -1452 1438 210 166 5 chr10 125340961 125341346 -14975419 - L2 LINE L2 -486 2828 2382 1059 256 62 22 chr10 125341407 125341727 -14975038 + LTR16C LTR ERVL 89 421 -70 432 271 29 7 chr10 125341744 125341884 -14974881 + MER113 DNA MER1_type? 328 470 -51 1680 183 10 16 chr10 125342680 125342986 -14973779 + AluJb SINE Alu 1 304 -8 301 191 118 27 chr10 125343162 125343272 -14973493 - L1ME4a LINE L1 -56 6065 5946 286 186 0 86 chr10 125343516 125343586 -14973179 - Charlie8 DNA MER1_type -1004 1413 1360 316 241 135 45 chr10 125343949 125344082 -14972683 + L2 LINE L2 3168 3312 -1 958 170 27 27 chr10 125344325 125344513 -14972252 + MER5A DNA MER1_type 1 188 -1 21 0 0 0 chr10 125344772 125344793 -14971972 + AT_rich Low_complexity Low_complexity 1 21 0 3249 123 77 53 chr10 125345135 125345340 -14971425 + Tigger3(Golem) DNA MER2_type 2348 2547 -482 1364 146 174 12 chr10 125345340 125345593 -14971172 - AluJb SINE Alu -8 294 1 3249 123 77 53 chr10 125345593 125346051 -14970714 + Tigger3(Golem) DNA MER2_type 2547 3027 -2 204 40 0 0 chr10 125347413 125347438 -14969327 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 851 248 146 41 chr10 125347459 125347868 -14968897 + HAL1 LINE L1 645 1140 -1367 2176 76 21 14 chr10 125347868 125348158 -14968607 + AluY SINE Alu 3 294 -17 851 248 146 41 chr10 125348158 125348356 -14968409 + HAL1 LINE L1 1140 1316 -1191 701 267 89 12 chr10 125348380 125348627 -14968138 + HAL1 LINE L1 1491 1756 -751 647 276 123 59 chr10 125348640 125348813 -14967952 + HAL1 LINE L1 1817 1977 -530 2261 117 0 7 chr10 125348813 125349121 -14967644 + AluSx SINE Alu 1 306 -6 647 276 123 59 chr10 125349121 125349278 -14967487 + HAL1 LINE L1 1977 2122 -385 2029 149 0 0 chr10 125349278 125349574 -14967191 + AluSx SINE Alu 1 296 -16 647 276 123 59 chr10 125349574 125349595 -14967170 + HAL1 LINE L1 2122 2140 -367 2553 69 0 0 chr10 125349595 125349899 -14966866 + AluY SINE Alu 1 304 -7 647 276 123 59 chr10 125349899 125350193 -14966572 + HAL1 LINE L1 2140 2506 -1 468 330 57 0 chr10 125351768 125351998 -14964767 + ERVL LTR ERVL 961 1203 -4561 2531 221 101 76 chr10 125352048 125352440 -14964325 + L1ME1 LINE L1 1079 1459 -4756 1908 100 4 4 chr10 125352440 125352700 -14964065 + AluSq SINE Alu 44 303 -10 2531 221 101 76 chr10 125352700 125353024 -14963741 + L1ME1 LINE L1 1459 1773 -4442 1342 156 15 52 chr10 125353024 125353054 -14963711 + L1MB5 LINE L1 5909 5939 -235 2362 93 3 3 chr10 125353054 125353366 -14963399 + AluSp SINE Alu 1 312 -1 1342 156 15 52 chr10 125353366 125353605 -14963160 + L1MB5 LINE L1 5939 6168 -6 2531 221 101 76 chr10 125353605 125353627 -14963138 + L1ME1 LINE L1 1773 1793 -4422 2100 119 0 0 chr10 125353627 125353904 -14962861 - AluSg SINE Alu -33 277 1 2531 221 101 76 chr10 125353904 125354226 -14962539 + L1ME1 LINE L1 1793 2105 -4110 2248 98 3 14 chr10 125354226 125354522 -14962243 + AluSx SINE Alu 1 293 -19 2531 221 101 76 chr10 125354522 125354807 -14961958 + L1ME1 LINE L1 2105 2425 -3790 2347 71 0 45 chr10 125354807 125355117 -14961648 + AluY SINE Alu 1 296 -15 2531 221 101 76 chr10 125355117 125355230 -14961535 + L1ME1 LINE L1 2425 2534 -3681 1759 205 74 26 chr10 125355237 125355833 -14960932 + L1ME1 LINE L1 4894 5517 -757 1721 122 81 7 chr10 125355845 125356140 -14960625 + MER1B DNA MER1_type 1 317 -22 1449 204 67 146 chr10 125356153 125356753 -14960012 + L1ME1 LINE L1 5526 6069 -166 2053 151 0 0 chr10 125356753 125357045 -14959720 + AluSx SINE Alu 1 292 -20 1449 204 67 146 chr10 125357045 125357117 -14959648 + L1ME1 LINE L1 6069 6145 -90 1532 245 75 8 chr10 125357117 125357505 -14959260 + LTR40c LTR ERVL 1 414 -51 1362 149 9 5 chr10 125357508 125357722 -14959043 + MER46A DNA MER2_type 22 236 0 200 226 12 60 chr10 125357840 125357924 -14958841 + GA-rich Low_complexity Low_complexity 1 80 0 27 0 0 0 chr10 125358057 125358084 -14958681 + AT_rich Low_complexity Low_complexity 1 27 0 1100 308 65 33 chr10 125358330 125358995 -14957770 + ERVL LTR ERVL 1643 2393 -3371 2192 76 14 0 chr10 125358995 125359285 -14957480 + AluSx SINE Alu 1 294 -18 1100 308 65 33 chr10 125359285 125359661 -14957104 + ERVL LTR ERVL 2393 2756 -3008 312 333 24 32 chr10 125359663 125359786 -14956979 - L1ME LINE L1 -621 5545 5424 1118 94 6 0 chr10 125359789 125359949 -14956816 - L1MA2 LINE L1 -1 6303 6143 1439 310 124 21 chr10 125359992 125361697 -14955068 - L1ME LINE L1 -753 5393 3514 465 279 86 80 chr10 125361722 125362023 -14954742 - L1ME LINE L1 -2724 3422 3120 247 196 18 0 chr10 125363174 125363230 -14953535 + G-rich Low_complexity Low_complexity 6 62 0 2171 64 13 17 chr10 125364669 125364967 -14951798 + AluY SINE Alu 1 297 -14 1531 157 42 0 chr10 125364971 125365258 -14951507 + AluJo SINE Alu 1 299 -13 757 308 73 5 chr10 125365540 125365632 -14951133 + L1M4 LINE L1 2470 2554 -3592 1410 202 181 23 chr10 125365632 125366068 -14950697 + MLT1D LTR MaLR 1 505 0 757 308 73 5 chr10 125366068 125366414 -14950351 + L1M4 LINE L1 2554 2938 -3208 201 250 58 0 chr10 125366876 125366928 -14949837 + L2 LINE L2 3163 3217 -96 486 230 36 14 chr10 125366973 125367112 -14949653 + L1ME4a LINE L1 5979 6120 -1 407 233 175 48 chr10 125367303 125367531 -14949234 - MLT1L LTR MaLR -179 436 180 271 254 42 14 chr10 125367639 125367710 -14949055 - MLT1K LTR MaLR -437 151 79 1155 126 12 0 chr10 125367920 125368087 -14948678 + AluSx SINE Alu 1 169 -143 1496 127 5 5 chr10 125368087 125368308 -14948457 - pTR5 LTR ERV1 -2046 392 172 269 260 0 0 chr10 125368328 125368405 -14948360 - LTR30 LTR ERV1 -98 624 548 6501 123 88 65 chr10 125368407 125369664 -14947101 - pTR5 LTR ERV1 -411 2027 743 952 117 0 0 chr10 125369664 125369801 -14946964 + AluSx SINE Alu 166 302 -10 1717 157 46 0 chr10 125370039 125370319 -14946446 - AluJb SINE Alu -19 293 1 920 317 157 26 chr10 125371184 125371248 -14945517 - L2 LINE L2 0 3313 3259 1935 131 10 0 chr10 125371248 125371546 -14945219 + AluJb SINE Alu 1 301 -11 920 317 157 26 chr10 125371546 125372247 -14944518 - L2 LINE L2 -54 3259 2456 380 332 98 34 chr10 125372314 125372579 -14944186 - L2 LINE L2 -2232 1082 801 470 299 28 7 chr10 125372943 125373087 -14943678 + LTR67 LTR ERVL 411 557 0 1560 238 117 18 chr10 125373158 125373612 -14943153 + Zaphod DNA AcHobo 23 521 -3510 875 164 36 12 chr10 125373615 125373780 -14942985 + Zaphod DNA AcHobo 2722 2890 -1141 3753 172 80 29 chr10 125373842 125374133 -14942632 + Zaphod DNA AcHobo 3054 3329 -702 2543 52 0 0 chr10 125374133 125374438 -14942327 + AluY SINE Alu 1 305 -6 3753 172 80 29 chr10 125374438 125375077 -14941688 + Zaphod DNA AcHobo 3329 4031 0 485 258 112 71 chr10 125375079 125375216 -14941549 - L2 LINE L2 -2568 746 616 1996 125 3 3 chr10 125375216 125375511 -14941254 + AluSx SINE Alu 1 295 -17 485 258 112 71 chr10 125375511 125375784 -14940981 - L2 LINE L2 -2698 616 319 2340 88 0 0 chr10 125375805 125376113 -14940652 + AluSq SINE Alu 2 309 -4 1108 228 98 25 chr10 125376575 125376983 -14939782 + Tigger8 DNA MER2_type 125 562 -104 4584 94 63 13 chr10 125377339 125378055 -14938710 - Tigger3(Golem) DNA MER2_type 0 3029 2278 658 213 0 8 chr10 125378032 125378154 -14938611 - Tigger3(Golem) DNA MER2_type -2907 122 2 * 3279 102 46 83 chr10 125378266 125378465 -14938300 + LTR10A LTR ERV1 1 206 -403 2317 74 0 0 chr10 125378465 125378762 -14938003 - AluY SINE Alu -14 297 1 3279 102 46 83 chr10 125378762 125379130 -14937635 + LTR10A LTR ERV1 206 547 -62 519 217 178 13 chr10 125379144 125379296 -14937469 - MIR SINE MIR -28 234 58 5067 145 41 9 chr10 125379755 125380630 -14936135 + MER4D LTR ERV1 1 903 0 902 301 75 17 chr10 125380775 125381288 -14935477 + MLT1L LTR MaLR 11 608 -4 359 283 10 30 chr10 125381660 125381759 -14935006 + MIR SINE MIR 20 116 -92 2192 99 0 7 chr10 125381771 125382074 -14934691 - AluSq SINE Alu -12 301 1 346 153 83 0 chr10 125382142 125382214 -14934551 - L1ME2 LINE L1 -201 5963 5886 2010 112 7 20 chr10 125382633 125382929 -14933836 - AluSx SINE Alu -20 292 1 2158 106 0 25 chr10 125382959 125383280 -14933485 - AluSq SINE Alu 0 313 1 2202 97 0 13 chr10 125383652 125383788 -14932977 + AluSq SINE Alu 1 137 -176 2141 115 3 0 chr10 125383788 125384093 -14932672 + AluSp SINE Alu 2 307 -6 2202 97 0 13 chr10 125384093 125384265 -14932500 + AluSq SINE Alu 137 305 -8 2223 87 10 3 chr10 125384265 125384565 -14932200 + AluSc SINE Alu 1 302 -7 3183 175 19 10 chr10 125384565 125385160 -14931605 - L1MB5 LINE L1 -9 6165 5566 391 303 146 11 chr10 125385293 125385478 -14931287 + MLT1J2 LTR MaLR 241 450 0 227 211 56 28 chr10 125385612 125385683 -14931082 - MLT1K LTR MaLR -5 583 511 2257 152 46 46 chr10 125386027 125386325 -14930440 - LOR1b LTR ERV1 0 461 161 2246 85 0 7 chr10 125386325 125386620 -14930145 - AluSx SINE Alu -19 293 1 2257 152 46 46 chr10 125386620 125386782 -14929983 - LOR1b LTR ERV1 -299 162 1 457 271 19 0 chr10 125387094 125387201 -14929564 + MIR SINE MIR 45 153 -109 334 241 28 37 chr10 125387234 125387342 -14929423 + MIR SINE MIR 136 242 -20 252 355 57 0 chr10 125387418 125387542 -14929223 - MER5A DNA MER1_type 0 189 59 256 285 291 7 chr10 125387811 125387962 -14928803 + L2 LINE L2 3120 3313 0 212 200 22 0 chr10 125389115 125389160 -14927605 + CT-rich Low_complexity Low_complexity 3 48 0 925 264 96 28 chr10 125389175 125389497 -14927268 + MLT1J LTR MaLR 156 499 -12 399 257 74 20 chr10 125389540 125389688 -14927077 + MER113 DNA MER1_type? 361 516 -5 267 367 31 16 chr10 125389692 125389820 -14926945 + MIR SINE MIR 25 154 -108 2057 115 0 0 chr10 125389848 125390134 -14926631 + AluSx SINE Alu 3 288 -24 323 300 100 9 chr10 125390139 125390249 -14926516 - L2 LINE L2 -12 3260 3141 507 252 111 23 chr10 125391088 125391275 -14925490 + MIR SINE MIR 17 216 -46 363 209 15 0 chr10 125391309 125391376 -14925389 - L2 LINE L2 -1 3312 3245 269 239 70 22 chr10 125391456 125391554 -14925211 - MLT1H LTR MaLR 0 549 449 3695 171 25 91 chr10 125391670 125393176 -14923589 + pTR5 LTR ERV1 743 2606 0 1505 197 57 52 chr10 125393449 125393834 -14922931 - MLT1B LTR MaLR 0 390 4 903 233 113 39 chr10 125393949 125394284 -14922481 - Charlie7 DNA MER1_type -1903 709 350 1547 161 0 54 chr10 125394285 125394602 -14922163 + AluJo SINE Alu 1 300 -12 502 133 0 0 chr10 125394840 125394915 -14921850 - U3 snRNA snRNA -142 75 1 1917 110 10 48 chr10 125395177 125395487 -14921278 + AluSx SINE Alu 1 298 -14 1352 215 154 15 chr10 125395641 125396036 -14920729 - MLT1D LTR MaLR -3 502 53 1722 174 17 0 chr10 125396538 125396837 -14919928 + AluJb SINE Alu 1 304 -8 10530 165 27 16 chr10 125396978 125398310 -14918455 + L1PB2 LINE L1 3057 4373 -1778 189 0 0 0 chr10 125398310 125398331 -14918434 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 10530 165 27 16 chr10 125398331 125399869 -14916896 + L1PB2 LINE L1 4373 5961 -190 1841 50 166 4 chr10 125399869 125400128 -14916637 + AluY SINE Alu 1 301 0 10530 165 27 16 chr10 125400128 125400322 -14916443 + L1PB2 LINE L1 5961 6151 0 731 154 14 154 chr10 125400380 125400499 -14916266 + MER53 DNA DNA 1 77 -112 2261 65 0 33 chr10 125400499 125400805 -14915960 + AluY SINE Alu 1 296 -15 731 154 14 154 chr10 125400805 125400905 -14915860 + MER53 DNA DNA 77 189 0 204 125 36 18 chr10 125400914 125400970 -14915795 + CT-rich Low_complexity Low_complexity 2 58 0 1368 177 182 5 chr10 125401509 125401897 -14914868 + MER89 LTR ERV1 1 559 0 22 0 0 0 chr10 125402157 125402179 -14914586 + AT_rich Low_complexity Low_complexity 1 22 0 2279 93 3 3 chr10 125402213 125402526 -14914239 - AluSq SINE Alu 0 313 1 400 247 83 85 chr10 125402567 125402988 -14913777 + MLT1H LTR MaLR 1 551 -16 2007 121 13 3 chr10 125403066 125403371 -14913394 - AluSx SINE Alu -4 308 1 580 290 115 45 chr10 125403389 125403658 -14913107 + MLT1L LTR MaLR 3 290 -325 509 267 81 19 chr10 125403700 125403861 -14912904 + MLT1L LTR MaLR 358 528 -87 5021 52 21 0 chr10 125404088 125404700 -14912065 + SVA Other Other 758 1382 -4 7471 75 4 3 chr10 125404731 125406511 -14910254 + L1PA7 LINE L1 4375 6154 0 265 323 45 19 chr10 125407068 125407223 -14909542 + L2 LINE L2 2905 3063 -209 538 274 84 33 chr10 125407244 125407459 -14909306 + MIR SINE MIR 34 259 -3 243 0 0 0 chr10 125407593 125407620 -14909145 + (T)n Simple_repeat Simple_repeat 1 27 0 252 281 0 0 chr10 125407620 125407684 -14909081 - MER5A DNA MER1_type -118 71 8 1860 147 0 10 chr10 125408118 125408411 -14908354 - AluSq SINE Alu -23 290 1 246 380 25 0 chr10 125409163 125409242 -14907523 - L2 LINE L2 -49 3223 3143 473 299 174 18 chr10 125409559 125409726 -14907039 + MER91A DNA MER1_type 4 196 0 1091 284 86 17 chr10 125409762 125410171 -14906594 - Tigger8 DNA MER2_type -173 493 57 2173 124 3 0 chr10 125410183 125410474 -14906291 + AluSg SINE Alu 1 292 -18 2313 90 0 0 chr10 125410956 125411244 -14905521 - AluSc SINE Alu -17 292 5 944 140 0 7 chr10 125411839 125411975 -14904790 - AluJo SINE Alu -177 135 1 2340 110 0 0 chr10 125412376 125412684 -14904081 - AluSx SINE Alu -4 308 1 275 333 14 52 chr10 125412798 125413008 -14903757 + L1MC4a LINE L1 5721 5922 -1886 251 239 257 22 chr10 125413515 125413737 -14903028 - L2 LINE L2 -19 3294 3021 2072 96 71 4 chr10 125414503 125414783 -14901982 + AluSx SINE Alu 1 299 -13 517 260 192 27 chr10 125415131 125415195 -14901570 + MIR SINE MIR 8 60 -202 2372 92 20 0 chr10 125415195 125415499 -14901266 + AluSx SINE Alu 2 311 -1 517 260 192 27 chr10 125415499 125415594 -14901171 + MIR SINE MIR 60 138 -124 2593 147 61 26 chr10 125415594 125416033 -14900732 + L1MB8 LINE L1 5655 6116 -62 1786 129 56 28 chr10 125416033 125416319 -14900446 - AluJo SINE Alu -18 294 1 2593 147 61 26 chr10 125416319 125416384 -14900381 + L1MB8 LINE L1 6116 6177 -1 517 260 192 27 chr10 125416384 125416442 -14900323 + MIR SINE MIR 138 262 0 1859 164 36 19 chr10 125416480 125416839 -14899926 + MLT1A1 LTR MaLR 1 365 0 337 277 39 46 chr10 125418966 125419096 -14897669 + MIR SINE MIR 16 144 -118 234 229 135 52 chr10 125420422 125420518 -14896247 + MIR SINE MIR 82 185 -77 1429 123 5 19 chr10 125420518 125420729 -14896036 + AluSg/x SINE Alu 95 302 -8 207 296 0 0 chr10 125420954 125421008 -14895757 - L2 LINE L2 -12 3260 3207 2051 129 26 3 chr10 125421917 125422219 -14894546 + AluSx SINE Alu 2 310 -2 1945 101 90 4 chr10 125422222 125422500 -14894265 + AluSg SINE Alu 1 302 -8 529 295 288 7 chr10 125422648 125423065 -14893700 + L2 LINE L2 2371 2904 -410 311 200 0 14 chr10 125423164 125423234 -14893531 + AluS SINE Alu 1 69 -234 2631 83 23 18 chr10 125423383 125423767 -14892998 - MLT2A1 LTR ERVL -58 386 1 2526 146 14 12 chr10 125424412 125424838 -14891927 + MSTB1 LTR MaLR 6 432 0 328 248 9 26 chr10 125425545 125425658 -14891107 - LTR67 LTR ERVL -8 549 439 561 259 41 22 chr10 125425925 125426083 -14890682 - MIR SINE MIR -36 172 7 707 148 23 8 chr10 125427020 125427148 -14889617 - MER20 DNA MER1_type 0 219 90 892 185 67 125 chr10 125427886 125428215 -14888550 + MLT1A2 LTR MaLR 33 342 -32 453 293 108 0 chr10 125428463 125428630 -14888135 + L2 LINE L2 3107 3291 -22 2089 159 37 6 chr10 125428634 125428986 -14887779 - MLT1A1 LTR MaLR -2 363 1 2105 141 30 0 chr10 125429048 125429347 -14887418 - AluSx SINE Alu -4 308 1 1104 198 45 95 chr10 125430057 125430435 -14886330 + MLT1B LTR MaLR 1 359 -31 1919 166 7 7 chr10 125430653 125430954 -14885811 + AluJb SINE Alu 1 301 -11 192 382 0 0 chr10 125431960 125432049 -14884716 - MIR SINE MIR -55 207 119 8114 84 8 9 chr10 125432392 125433464 -14883301 - MER11C LTR ERVK 0 1071 1 190 184 26 0 chr10 125433971 125434009 -14882756 + MIR SINE MIR 106 144 -64 208 206 0 0 chr10 125434246 125434280 -14882485 + C-rich Low_complexity Low_complexity 1 34 0 267 206 16 16 chr10 125434860 125434923 -14881842 + MIR SINE MIR 80 142 -120 341 184 252 10 chr10 125435317 125435420 -14881345 + MER5A DNA MER1_type 56 183 -6 228 331 53 45 chr10 125435438 125435571 -14881194 - MER5B DNA MER1_type -22 156 23 188 311 14 40 chr10 125436055 125436071 -14880694 + MER5A DNA MER1_type 2 15 -174 292 217 17 0 chr10 125436071 125436131 -14880634 - MER5A DNA MER1_type -3 186 126 186 103 0 0 chr10 125436474 125436503 -14880262 + (CAG)n Simple_repeat Simple_repeat 2 30 0 7394 201 20 12 chr10 125436963 125438722 -14878043 - L1 LINE L1 -1087 5775 4003 * 31346 98 17 55 chr10 125438710 125445112 -14871653 - L1PA7 LINE L1 0 6154 12 495 196 31 1 chr10 125445168 125445319 -14871446 - L1 LINE L1 -2843 4019 3864 186 301 60 48 chr10 125445329 125445412 -14871353 + MER5A DNA MER1_type 56 139 -50 14648 191 73 12 chr10 125445434 125447172 -14869593 - L1PB1 LINE L1 0 6867 5237 261 0 0 0 chr10 125447172 125447201 -14869564 + (TTG)n Simple_repeat Simple_repeat 2 30 0 14648 191 73 12 chr10 125447201 125451946 -14864819 - L1PB1 LINE L1 -1630 5237 7 12809 115 103 15 chr10 125451961 125452659 -14864106 - L1PBa LINE L1 -2979 3883 3248 2085 117 11 0 chr10 125452659 125452973 -14863792 + AluY SINE Alu 1 317 0 12809 115 103 15 chr10 125452973 125455263 -14861502 - L1PBa LINE L1 -3614 3248 634 876 144 0 0 chr10 125455264 125455403 -14861362 - L1PBa LINE L1 -6724 139 1 994 276 53 17 chr10 125455426 125455781 -14860984 + L1MC4a LINE L1 5475 5842 -1966 401 306 94 58 chr10 125455820 125456095 -14860670 + L1MC4a LINE L1 5930 6214 -1594 293 309 149 0 chr10 125456322 125456416 -14860349 + MIR SINE MIR 31 138 -70 229 291 105 0 chr10 125457255 125457341 -14859424 + MIR SINE MIR 28 122 -140 421 261 42 0 chr10 125457559 125457701 -14859064 - L1MC/D LINE L1 -2297 5511 5364 719 213 117 11 chr10 125457814 125458002 -14858763 + MER3 DNA MER1_type 2 209 0 2214 123 7 0 chr10 125458021 125458322 -14858443 + AluSq SINE Alu 1 303 -10 2335 103 0 3 chr10 125458326 125458636 -14858129 + AluSg SINE Alu 1 309 -1 2825 118 32 23 chr10 125459786 125459834 -14856931 - MER65A LTR ERV1 0 445 399 2196 96 38 0 chr10 125459834 125460126 -14856639 + AluSp SINE Alu 1 303 -10 2825 118 32 23 chr10 125460126 125460518 -14856247 - MER65A LTR ERV1 -46 399 1 262 198 52 69 chr10 125460560 125460676 -14856089 + MER5A DNA MER1_type 8 121 -68 183 193 59 170 chr10 125460582 125460717 -14856048 - MER5A DNA MER1_type -20 169 50 * 392 250 118 22 chr10 125461076 125461212 -14855553 + MIR SINE MIR 34 182 -80 525 325 73 8 chr10 125461708 125461942 -14854823 + MIR SINE MIR 2 250 -12 672 50 0 0 chr10 125462566 125462646 -14854119 + MLT2A2 LTR ERVL 71 150 -303 348 283 87 61 chr10 125462860 125463090 -14853675 + L1M2 LINE L1 766 1001 -5848 2015 163 52 33 chr10 125463403 125463951 -14852814 - MLT2A2 LTR ERVL 0 554 1 1913 143 102 18 chr10 125464791 125465126 -14851639 + THE1B LTR MaLR 1 363 -1 182 231 0 0 chr10 125465515 125465554 -14851211 - L2 LINE L2 -18 3254 3216 249 276 79 0 chr10 125465654 125465730 -14851035 + MIR SINE MIR 166 247 -15 258 214 79 0 chr10 125465842 125465934 -14850831 - MIR SINE MIR -67 141 31 528 159 179 35 chr10 125466103 125466248 -14850517 + MER105 DNA DNA 37 202 -2 1453 227 82 33 chr10 125466495 125467025 -14849740 - MLT1E LTR MaLR 0 593 1 309 200 14 14 chr10 125467700 125467770 -14848995 + MLT1L LTR MaLR 120 189 -426 578 301 59 5 chr10 125467886 125468089 -14848676 + MLT1L LTR MaLR 350 563 -52 1760 204 271 34 chr10 125468341 125469208 -14847557 + Charlie7 DNA MER1_type 1469 2550 -62 306 0 0 0 chr10 125469208 125469242 -14847523 + (CA)n Simple_repeat Simple_repeat 2 35 0 1760 204 271 34 chr10 125469242 125469257 -14847508 + Charlie7 DNA MER1_type 2550 2560 -52 1047 262 136 36 chr10 125469945 125470586 -14846179 - L1ME3A LINE L1 -208 5962 5258 492 235 157 39 chr10 125470733 125471014 -14845751 - L1ME3A LINE L1 -1376 4770 4457 252 338 0 0 chr10 125471078 125471158 -14845607 - L1ME3A LINE L1 -2316 3830 3751 320 293 16 47 chr10 125471204 125471395 -14845370 - L1ME3A LINE L1 -3487 2659 2475 1398 162 25 58 chr10 125471422 125471572 -14845193 - AluJo SINE Alu -32 280 127 1688 167 10 51 chr10 125471572 125471884 -14844881 - AluSx SINE Alu -13 299 1 2132 130 7 0 chr10 125471888 125472187 -14844578 - AluSq SINE Alu -12 301 1 1398 162 25 58 chr10 125472187 125472309 -14844456 - AluJo SINE Alu -188 124 12 2314 107 0 16 chr10 125475776 125476093 -14840672 + AluSx SINE Alu 1 312 0 249 158 171 0 chr10 125479121 125479203 -14837562 - MIR SINE MIR -49 213 118 587 265 301 31 chr10 125479327 125480089 -14836676 + L2 LINE L2 1963 2929 -385 435 190 203 51 chr10 125480098 125480256 -14836509 + L2 LINE L2 3124 3305 -8 2720 23 16 7 chr10 125482319 125482628 -14834137 + AluYb8 SINE Alu 1 312 -6 216 338 26 0 chr10 125482978 125483055 -14833710 - L3 LINE CR1 -11 1566 1488 2144 118 0 17 chr10 125483060 125483357 -14833408 + AluSx SINE Alu 1 292 -20 2676 55 0 0 chr10 125483882 125484193 -14832572 + AluY SINE Alu 1 311 0 225 272 107 39 chr10 125485231 125485334 -14831431 - MER117 DNA MER1_type -81 116 7 222 286 0 29 chr10 125485436 125485506 -14831259 + MER5A DNA MER1_type 100 167 -22 199 263 38 38 chr10 125485458 125485538 -14831227 - MER5A DNA MER1_type -109 80 1 * 422 134 60 0 chr10 125486217 125486284 -14830481 - AluY SINE Alu -16 293 223 1415 69 0 6 chr10 125486287 125486461 -14830304 - AluY SINE Alu -138 173 1 294 152 13 76 chr10 125486621 125486700 -14830065 - MIR SINE MIR -18 244 171 1442 72 95 54 chr10 125488522 125488662 -14828103 + MER30 DNA MER1_type 1 155 -75 2014 114 3 10 chr10 125488662 125488951 -14827814 + AluSg SINE Alu 6 292 -18 1442 72 95 54 chr10 125488951 125489031 -14827734 + MER30 DNA MER1_type 155 230 0 326 308 154 45 chr10 125489465 125489686 -14827079 - MIR SINE MIR -16 246 2 303 302 23 0 chr10 125489769 125489855 -14826910 - MIR SINE MIR -84 124 37 419 264 48 77 chr10 125490400 125490439 -14826326 + MLT1G1 LTR MaLR 9 48 -542 2454 70 10 0 chr10 125490439 125490740 -14826025 - AluSx SINE Alu -8 304 1 419 264 48 77 chr10 125490740 125490908 -14825857 + MLT1G1 LTR MaLR 48 210 -380 687 237 171 9 chr10 125490920 125491131 -14825634 + MLT1G1 LTR MaLR 351 595 0 453 232 45 9 chr10 125491269 125491381 -14825384 + MIR SINE MIR 74 189 -73 2437 44 0 17 chr10 125491946 125492244 -14824521 - AluY SINE Alu -18 293 1 2461 86 0 0 chr10 125493111 125493414 -14823351 + AluY SINE Alu 1 303 -8 696 262 103 16 chr10 125494597 125494649 -14822116 + MLT1L LTR MaLR 336 382 -233 1828 111 228 37 chr10 125494649 125495027 -14821738 + LTR7 LTR ERV1 1 450 0 696 262 103 16 chr10 125495027 125495226 -14821539 + MLT1L LTR MaLR 382 609 -6 2359 107 0 0 chr10 125495247 125495556 -14821209 - AluSq SINE Alu -3 310 2 540 220 138 0 chr10 125495657 125495766 -14820999 - FLAM_A SINE Alu -9 124 1 23 0 0 0 chr10 125495794 125495817 -14820948 + AT_rich Low_complexity Low_complexity 1 23 0 624 265 146 42 chr10 125495888 125496583 -14820182 - L1ME4a LINE L1 -226 5895 5285 364 83 0 0 chr10 125496724 125496772 -14819993 + Alu SINE Alu 249 296 -5 570 156 138 28 chr10 125496797 125496906 -14819859 + FLAM_C SINE Alu 14 134 -9 348 309 105 22 chr10 125496907 125497088 -14819677 - L1ME4a LINE L1 -1224 4922 4727 2307 317 50 19 chr10 125497088 125497704 -14819061 + LTR27 LTR ERV1 2 636 0 22 35 0 0 chr10 125498004 125498033 -14818732 + AT_rich Low_complexity Low_complexity 1 29 0 194 339 123 0 chr10 125499835 125499900 -14816865 + L2 LINE L2 3168 3240 -32 2266 109 3 3 chr10 125500543 125500845 -14815920 + AluSx SINE Alu 1 302 -10 1282 199 40 98 chr10 125501224 125501590 -14815175 + MLT1A2 LTR MaLR 1 344 -30 2169 153 105 18 chr10 125501590 125501989 -14814776 - Tigger2a DNA MER2_type 0 434 1 1282 199 40 98 chr10 125501989 125502019 -14814746 + MLT1A2 LTR MaLR 344 374 0 1600 154 3 83 chr10 125502564 125502902 -14813863 - AluJo SINE Alu 0 312 2 234 301 68 0 chr10 125502944 125503017 -14813748 - MIR SINE MIR -111 151 74 246 257 108 0 chr10 125503362 125503436 -14813329 + L2 LINE L2 3200 3281 -32 226 340 29 33 chr10 125503488 125503632 -14813133 + MIR3 SINE MIR 29 172 -36 2175 119 0 0 chr10 125503765 125504058 -14812707 - AluSx SINE Alu -19 293 1 1039 190 5 0 chr10 125504799 125504983 -14811782 - MER52A LTR ERV1 0 1755 1571 * 5525 181 111 22 chr10 125504972 125506187 -14810578 - MER52A LTR ERV1 -64 1214 1 1595 149 63 29 chr10 125506517 125506865 -14809900 - Charlie1 DNA MER1_type 0 2761 2402 * 3029 191 76 25 chr10 125506841 125507536 -14809229 - Charlie1 DNA MER1_type -500 2261 1531 242 254 0 18 chr10 125507570 125507625 -14809140 - Charlie1 DNA MER1_type -2693 68 15 22 0 0 0 chr10 125507818 125507840 -14808925 + AT_rich Low_complexity Low_complexity 1 22 0 770 224 7 0 chr10 125508142 125508294 -14808471 + MER3 DNA MER1_type 1 153 -56 262 267 194 19 chr10 125508562 125508634 -14808131 - L1ME4a LINE L1 -12 6109 6051 2521 62 13 0 chr10 125508634 125508941 -14807824 + AluY SINE Alu 1 311 0 262 267 194 19 chr10 125508941 125509126 -14807639 - L1ME4a LINE L1 -70 6051 5807 2438 75 0 0 chr10 125509285 125509580 -14807185 - AluY SINE Alu -15 296 2 252 279 186 29 chr10 125509667 125509807 -14806958 + MER5A DNA MER1_type 1 162 -27 1192 247 69 57 chr10 125510107 125510605 -14806160 + L1MCc LINE L1 17 1070 -5353 248 294 0 109 chr10 125510863 125511014 -14805751 + L1MCc LINE L1 698 830 -5593 591 245 43 27 chr10 125511059 125511243 -14805522 + MER58A DNA MER1_type 1 187 -37 2460 71 7 0 chr10 125511243 125511552 -14805213 - AluY SINE Alu 0 311 1 781 199 73 45 chr10 125511552 125511873 -14804892 + L1MCc LINE L1 1240 1566 -4856 2399 88 3 0 chr10 125512209 125512504 -14804261 + AluSp SINE Alu 1 296 -17 1923 180 43 43 chr10 125514672 125514760 -14802005 + Tigger7 DNA MER2_type 2 89 -644 2444 71 3 19 chr10 125514760 125515068 -14801697 - AluSp SINE Alu -10 303 1 1923 180 43 43 chr10 125515068 125515418 -14801347 + Tigger7 DNA MER2_type 88 440 -293 1832 154 26 26 chr10 125515403 125515746 -14801019 + MER66B LTR ERV1 6 348 -138 * 393 285 168 6 chr10 125515765 125515944 -14800821 - L1MEc LINE L1 -4106 2290 2083 239 239 116 43 chr10 125516150 125516288 -14800477 - L1MEc LINE L1 -4614 1782 1635 2050 115 35 7 chr10 125516456 125516744 -14800021 - AluSg1 SINE Alu -13 296 1 1969 165 0 0 chr10 125517865 125518162 -14798603 + AluJb SINE Alu 1 297 -15 202 326 178 7 chr10 125519042 125519177 -14797588 - L2 LINE L2 -3 3269 3112 1897 152 0 17 chr10 125519787 125520089 -14796676 + AluJb SINE Alu 2 298 -14 242 211 35 35 chr10 125520279 125520336 -14796429 - MIR SINE MIR -85 177 121 1241 225 86 16 chr10 125520441 125520756 -14796009 - MER58B DNA MER1_type -4 337 1 6343 149 19 224 chr10 125520778 125522983 -14793782 + MER52A LTR ERV1 1 1755 0 2611 74 0 0 chr10 125523147 125523458 -14793307 - AluY SINE Alu 0 311 1 904 284 116 38 chr10 125524773 125525171 -14791594 + MLT1J LTR MaLR 5 433 -78 182 325 50 0 chr10 125525770 125525850 -14790915 - MIR3 SINE MIR -32 176 93 393 331 12 24 chr10 125526090 125526259 -14790506 - L1M4 LINE L1 -1001 5145 4979 854 143 0 0 chr10 125526297 125526416 -14790349 + AluSg/x SINE Alu 132 250 -62 267 294 98 0 chr10 125526544 125526646 -14790119 + MIR SINE MIR 77 188 -74 334 182 65 0 chr10 125526646 125526723 -14790042 + MIR SINE MIR 105 186 -76 412 261 103 32 chr10 125526727 125526914 -14789851 - MLT1G1 LTR MaLR -40 527 303 1505 163 28 100 chr10 125526914 125527275 -14789490 + LTR32 LTR ERVL 15 349 -122 734 196 20 7 chr10 125527333 125527486 -14789279 + LTR32 LTR ERVL 317 471 0 350 280 91 0 chr10 125527496 125527639 -14789126 - L2 LINE L2 -215 3098 2943 396 155 0 0 chr10 125528210 125528281 -14788484 + CT-rich Low_complexity Low_complexity 1 71 0 691 211 94 17 chr10 125528287 125528467 -14788298 - MLT1G1 LTR MaLR -401 194 1 488 178 114 41 chr10 125531000 125531187 -14785578 - MER58 DNA MER1_type -3 2417 5 2308 108 0 0 chr10 125531223 125531520 -14785245 + AluSx SINE Alu 1 297 -15 2303 86 3 30 chr10 125531524 125531827 -14784938 + AluSp SINE Alu 5 299 -14 1024 194 0 0 chr10 125533328 125533498 -14783267 + FRAM SINE Alu 1 166 -10 801 204 192 88 chr10 125533499 125533562 -14783203 + L1ME2 LINE L1 5697 5752 -412 2187 132 0 0 chr10 125533562 125533866 -14782899 + AluSx SINE Alu 1 304 -8 801 204 192 88 chr10 125533866 125534065 -14782700 + L1ME2 LINE L1 5752 5929 -235 2315 96 0 17 chr10 125534065 125534366 -14782399 + AluSc SINE Alu 1 296 -13 801 204 192 88 chr10 125534366 125534524 -14782241 + L1ME2 LINE L1 5929 6162 -2 445 185 108 13 chr10 125534761 125534891 -14781874 - MLT1L LTR MaLR -4 611 368 283 158 35 0 chr10 125535034 125535091 -14781674 - MLT1L LTR MaLR -363 252 194 336 246 91 0 chr10 125535718 125535835 -14780930 + MIR3 SINE MIR 75 202 -6 204 125 0 0 chr10 125535930 125535962 -14780803 + (ATGGTG)n Simple_repeat Simple_repeat 4 35 0 511 250 98 18 chr10 125535965 125536129 -14780636 - MIR SINE MIR -1 261 85 2565 155 7 2 chr10 125536132 125536558 -14780207 - LTR32 LTR ERVL 0 471 44 889 51 34 0 chr10 125536574 125536692 -14780073 - L1PB1 LINE L1 -4 6147 6026 2141 115 0 7 chr10 125536713 125537000 -14779765 - AluSq SINE Alu -8 305 21 2488 90 32 24 chr10 125537036 125537446 -14779319 - L1PB2 LINE L1 -96 6055 5643 1829 133 61 64 chr10 125537486 125537877 -14778888 + MLT1B LTR MaLR 1 390 0 199 225 25 0 chr10 125537883 125537923 -14778842 - MIR SINE MIR -188 74 34 477 253 59 41 chr10 125538274 125538444 -14778321 + MIR SINE MIR 40 212 -50 673 274 66 9 chr10 125539177 125539409 -14777356 + MIR SINE MIR 15 257 -5 281 224 45 0 chr10 125539470 125539537 -14777228 + MER96 DNA MER1_type? 106 175 0 23 0 0 0 chr10 125540712 125540735 -14776030 + AT_rich Low_complexity Low_complexity 1 23 0 2105 117 7 0 chr10 125540784 125541111 -14775654 - AluSx SINE Alu 0 329 1 248 326 49 42 chr10 125541125 125541269 -14775496 - L2 LINE L2 -9 3263 3119 599 261 43 19 chr10 125541550 125541711 -14775054 - MER5B DNA MER1_type -3 175 11 698 122 86 36 chr10 125541751 125541890 -14774875 + MER5A DNA MER1_type 1 146 -43 317 123 18 18 chr10 125541890 125541947 -14774818 - THE1C LTR MaLR 0 375 319 30 27 0 0 chr10 125542014 125542051 -14774714 + AT_rich Low_complexity Low_complexity 1 37 0 2932 94 7 7 chr10 125542065 125542469 -14774296 - L1PA10 LINE L1 -1 6167 5764 1722 147 43 21 chr10 125542471 125542798 -14773967 - THE1C LTR MaLR -41 334 1 397 280 134 38 chr10 125542915 125543154 -14773611 - MIR SINE MIR 0 262 1 282 230 161 0 chr10 125544122 125544209 -14772556 - MER5A DNA MER1_type -80 109 9 189 231 0 0 chr10 125544350 125544389 -14772376 + MIR SINE MIR 99 137 -71 1927 191 175 30 chr10 125544597 125545253 -14771512 + L1MEc LINE L1 519 1269 -5127 286 193 193 0 chr10 125545275 125545332 -14771433 - MER5A DNA MER1_type -84 105 38 1022 186 30 65 chr10 125545348 125545427 -14771338 + MER58A DNA MER1_type 2 82 -2338 2442 113 120 5 chr10 125545427 125545809 -14770956 - MSTA LTR MaLR 0 428 3 1022 186 30 65 chr10 125545809 125545829 -14770936 + MER58A DNA MER1_type 82 101 -2319 2457 101 0 0 chr10 125545829 125546136 -14770629 - AluSx SINE Alu -5 307 1 1022 186 30 65 chr10 125546136 125546266 -14770499 + MER58A DNA MER1_type 101 224 0 313 296 195 26 chr10 125546295 125546521 -14770244 - L2 LINE L2 -94 3219 2956 1535 201 33 36 chr10 125546548 125546912 -14769853 - MLT1A1 LTR MaLR -2 363 1 312 345 83 43 chr10 125546935 125547260 -14769505 - L2 LINE L2 -440 2874 2537 353 153 14 69 chr10 125547464 125547503 -14769262 + MER81 DNA DNA 1 36 -78 4171 157 20 68 chr10 125547503 125548336 -14768429 + MER54B LTR ERVL 1 793 0 353 153 14 69 chr10 125548336 125548368 -14768397 + MER81 DNA DNA 36 68 -46 234 296 278 9 chr10 125549193 125549301 -14767464 - MIR3 SINE MIR -63 145 9 260 305 57 50 chr10 125549739 125549847 -14766918 + MIR SINE MIR 9 120 -142 1426 146 0 29 chr10 125549847 125550086 -14766679 - MER46A DNA MER2_type 0 236 5 260 305 57 50 chr10 125550086 125550118 -14766647 + MIR SINE MIR 120 150 -112 505 264 60 31 chr10 125550160 125550241 -14766524 + L1MC5 LINE L1 6499 6576 -1238 2363 93 6 0 chr10 125550241 125550552 -14766213 - AluSq SINE Alu 0 313 1 505 264 60 31 chr10 125550552 125550762 -14766003 + L1MC5 LINE L1 6576 6797 -1017 432 228 21 48 chr10 125550791 125550980 -14765785 + L1MC5 LINE L1 7342 7525 -436 * 2581 205 17 112 chr10 125550964 125551191 -14765574 + L1MC5 LINE L1 6833 7080 -881 1855 140 9 37 chr10 125551191 125551512 -14765253 + AluJb SINE Alu 1 312 0 2581 205 17 112 chr10 125551512 125552341 -14764424 + L1MC5 LINE L1 7080 7789 -172 2206 62 91 0 chr10 125552363 125552639 -14764126 + AluY SINE Alu 1 301 -10 5335 132 31 15 chr10 125552640 125553593 -14763172 + L1MA7 LINE L1 5323 6291 0 384 237 26 0 chr10 125553652 125553766 -14762999 + L1MC5 LINE L1 7809 7925 -36 193 191 48 0 chr10 125553798 125553840 -14762925 + MIR SINE MIR 185 228 -34 194 256 110 49 chr10 125554486 125554500 -14762265 + MER5A DNA MER1_type 2 20 -169 234 246 130 0 chr10 125554500 125554569 -14762196 - MER5A DNA MER1_type 0 189 112 2196 129 0 0 chr10 125555526 125555829 -14760936 - AluSx SINE Alu -9 303 1 193 308 0 39 chr10 125555903 125555981 -14760784 + L2 LINE L2 3187 3261 -11 1393 198 19 70 chr10 125556198 125556335 -14760430 - MLT1A1 LTR MaLR 0 365 223 2639 46 0 3 chr10 125556335 125556638 -14760127 - AluY SINE Alu -9 302 1 1393 198 19 70 chr10 125556638 125556725 -14760040 - MLT1A1 LTR MaLR -142 223 133 2314 78 0 3 chr10 125556725 125557008 -14759757 - AluSx SINE Alu -10 302 21 1393 198 19 70 chr10 125557008 125557155 -14759610 - MLT1A1 LTR MaLR -232 133 12 408 341 73 11 chr10 125558067 125558246 -14758519 - MIR SINE MIR 0 262 73 3968 178 35 10 chr10 125558274 125559069 -14757696 + L1MB7 LINE L1 5328 6146 -38 2553 95 13 26 chr10 125559069 125559449 -14757316 - THE1C LTR MaLR 0 375 1 3968 178 35 10 chr10 125559449 125559473 -14757292 + L1MB7 LINE L1 6146 6168 -16 2640 133 33 12 chr10 125561303 125561723 -14755042 + MSTB1 LTR MaLR 1 429 -3 256 300 0 0 chr10 125561823 125561903 -14754862 + MIR3 SINE MIR 129 208 0 627 229 106 0 chr10 125561980 125562159 -14754606 - MIR SINE MIR -1 261 64 1068 216 58 0 chr10 125562287 125562495 -14754270 + MER58A DNA MER1_type 4 223 -1 480 266 9 0 chr10 125562500 125562613 -14754152 + MER81 DNA DNA 1 114 0 432 271 198 35 chr10 125563004 125563080 -14753685 + MLT1H LTR MaLR 11 73 -476 2397 84 7 13 chr10 125563080 125563390 -14753375 - AluSq SINE Alu -5 308 1 432 271 198 35 chr10 125563390 125563697 -14753068 + MLT1H LTR MaLR 73 479 -70 14177 117 14 1 chr10 125563716 125565757 -14751008 + Tigger1 DNA MER2_type 2 2068 -350 7105 71 7 1 chr10 125565757 125567475 -14749290 - L1PA6 LINE L1 0 6154 4443 7880 77 10 1 chr10 125567475 125568511 -14748254 + L1PA6 LINE L1 3390 4434 -1712 1617 107 18 214 chr10 125568511 125568950 -14747815 + Tigger1 DNA MER2_type 2065 2417 -1 489 246 98 70 chr10 125569033 125569318 -14747447 + L1ME4a LINE L1 5636 5928 -193 562 280 22 43 chr10 125570142 125570327 -14746438 - MIR3 SINE MIR -6 202 42 386 48 0 167 chr10 125570339 125570423 -14746342 - MER41A LTR ERV1 -82 472 403 182 211 39 0 chr10 125570968 125571020 -14745745 + GA-rich Low_complexity Low_complexity 1 54 0 1938 172 46 41 chr10 125571203 125571639 -14745126 + MLT2D LTR ERVL 1 520 0 24 67 0 0 chr10 125571722 125571767 -14744998 + AT_rich Low_complexity Low_complexity 1 45 0 426 257 21 21 chr10 125571795 125571935 -14744830 + HAL1b LINE L1 223 362 -986 * 1264 213 7 3 chr10 125571913 125572195 -14744570 + L1MC4 LINE L1 7096 7378 -664 426 265 99 25 chr10 125572430 125572592 -14744173 - MIR SINE MIR -55 207 34 2405 80 0 3 chr10 125572844 125573146 -14743619 + AluY SINE Alu 1 301 -10 1444 226 7 0 chr10 125573208 125573487 -14743278 + AluJb SINE Alu 1 281 -31 360 0 0 0 chr10 125573487 125573527 -14743238 + (CA)n Simple_repeat Simple_repeat 1 40 0 361 343 15 15 chr10 125573699 125573897 -14742868 + MLT1L LTR MaLR 418 615 0 2590 216 22 22 chr10 125574669 125575220 -14741545 + MER74B LTR ERVL 59 609 -13 1215 158 0 0 chr10 125575230 125575414 -14741351 - AluJo SINE Alu 0 312 129 657 152 88 24 chr10 125576051 125576176 -14740589 - AluJo SINE Alu -169 133 1 233 282 153 0 chr10 125576210 125576334 -14740431 - MIR SINE MIR -25 237 95 528 223 166 0 chr10 125576840 125576991 -14739774 + MER5A DNA MER1_type 4 183 -6 743 144 16 123 chr10 125577192 125577379 -14739386 - MER20 DNA MER1_type -22 197 31 341 286 137 6 chr10 125577732 125577893 -14738872 + MIR3 SINE MIR 16 197 -11 559 283 107 17 chr10 125578698 125578988 -14737777 - MLT1J LTR MaLR -2 509 194 237 252 47 28 chr10 125579062 125579169 -14737596 + L1ME2 LINE L1 116 224 -6215 1218 277 101 57 chr10 125579315 125579897 -14736868 - MLT2F LTR ERVL -55 608 1 471 242 45 49 chr10 125580228 125580506 -14736259 + L1ME2 LINE L1 1364 1759 -5188 * 7411 253 77 32 chr10 125580492 125582707 -14734058 + L1ME2 LINE L1 2619 5070 -1887 2052 126 0 24 chr10 125582707 125583114 -14733651 + AluSq SINE Alu 1 400 0 7411 253 77 32 chr10 125583114 125584210 -14732555 + L1ME2 LINE L1 5070 6115 -842 * 11266 158 24 4 chr10 125584205 125587173 -14729592 + L1MA4 LINE L1 3279 6297 -3 2841 222 49 34 chr10 125587135 125587885 -14728880 + L1ME1 LINE L1 5261 6215 -119 * 225 114 0 0 chr10 125587885 125587920 -14728845 + MER3 DNA MER1_type 15 49 -160 2841 222 49 34 chr10 125587920 125588041 -14728724 + L1ME1 LINE L1 6215 6333 -1 3121 176 104 48 chr10 125588061 125588375 -14728390 + L1ME2 LINE L1 6132 6427 -548 2393 79 0 38 chr10 125588375 125588693 -14728072 + AluSp SINE Alu 1 306 -7 3121 176 104 48 chr10 125588693 125589177 -14727588 + L1ME2 LINE L1 6427 6975 0 768 273 37 0 chr10 125589196 125589383 -14727382 - MLT1J LTR MaLR -315 196 3 2184 124 0 0 chr10 125589406 125589705 -14727060 - AluSx SINE Alu -8 304 6 1634 175 3 21 chr10 125589774 125590060 -14726705 - AluJo SINE Alu -9 303 23 244 222 48 16 chr10 125590717 125590780 -14725985 - L2 LINE L2 -7 3265 3201 224 279 93 12 chr10 125591699 125591785 -14724980 + L2 LINE L2 3171 3263 -9 491 309 51 42 chr10 125592096 125592313 -14724452 + L2 LINE L2 2866 3084 -188 559 315 60 9 chr10 125592670 125592886 -14723879 + MIR SINE MIR 6 232 -30 352 246 127 59 chr10 125593129 125593242 -14723523 + L1ME LINE L1 5566 5670 -451 1776 173 0 36 chr10 125593242 125593549 -14723216 - AluJb SINE Alu -16 296 1 352 246 127 59 chr10 125593549 125593671 -14723094 + L1ME LINE L1 5670 5817 -304 1748 161 0 25 chr10 125594905 125595185 -14721580 + AluJo SINE Alu 1 273 -39 314 171 16 54 chr10 125595186 125595315 -14721450 + GA-rich Low_complexity Low_complexity 3 126 0 263 87 43 0 chr10 125595344 125595390 -14721375 + A-rich Low_complexity Low_complexity 3 50 0 3331 139 13 49 chr10 125595410 125595957 -14720808 - MER1A DNA MER1_type 0 527 1 943 264 107 52 chr10 125596217 125596350 -14720415 - LTR16C LTR ERVL 0 491 367 2484 103 43 6 chr10 125596350 125596701 -14720064 - THE1B LTR MaLR 0 364 1 943 264 107 52 chr10 125596701 125597026 -14719739 - LTR16C LTR ERVL -124 367 8 14770 179 58 50 chr10 125597056 125598313 -14718452 + HERVH LTR ERV1 1321 2566 -5147 10523 42 16 102 chr10 125598313 125599827 -14716938 + SVA Other Other 1 1385 -1 14770 179 58 50 chr10 125599827 125600355 -14716410 + HERVH LTR ERV1 2566 3088 -4625 3828 99 0 4 chr10 125600355 125600868 -14715897 + MER9 LTR ERVK 1 511 0 14770 179 58 50 chr10 125600868 125602876 -14713889 + HERVH LTR ERV1 3088 5147 -2566 2661 107 46 12 chr10 125602903 125603316 -14713449 + HERVH LTR ERV1 7287 7713 0 2526 114 58 23 chr10 125603316 125603744 -14713021 + LTR7 LTR ERV1 1 443 -7 1492 149 58 40 chr10 125603747 125604022 -14712743 - AluJo SINE Alu -32 280 1 496 264 12 49 chr10 125604112 125604275 -14712490 - L3 LINE CR1 -125 1452 1296 22 0 0 0 chr10 125605329 125605351 -14711414 + AT_rich Low_complexity Low_complexity 1 22 0 2075 107 7 11 chr10 125605961 125606285 -14710480 + AluSg SINE Alu 1 323 0 294 214 0 0 chr10 125607384 125607440 -14709325 - L2 LINE L2 -49 3264 3209 376 218 28 70 chr10 125607953 125608095 -14708670 + L1ME LINE L1 5534 5669 -452 1140 117 17 39 chr10 125608166 125608345 -14708420 + AluSg/x SINE Alu 129 303 -7 366 261 141 14 chr10 125608347 125608489 -14708276 - MIR SINE MIR -62 200 41 22 35 0 0 chr10 125608571 125608600 -14708165 + AT_rich Low_complexity Low_complexity 1 29 0 1809 167 0 7 chr10 125608604 125608892 -14707873 + AluJo SINE Alu 1 286 -26 4271 77 5 5 chr10 125609612 125610182 -14706583 + L1PA13 LINE L1 5594 6163 0 231 184 0 41 chr10 125610910 125610959 -14705806 - MIR3 SINE MIR -18 190 144 262 260 0 78 chr10 125611387 125611464 -14705301 - L2 LINE L2 -9 3304 3234 209 186 0 23 chr10 125611486 125611529 -14705236 + GA-rich Low_complexity Low_complexity 3 44 0 279 220 0 0 chr10 125611594 125611644 -14705121 - L2 LINE L2 -5 3267 3218 203 167 0 0 chr10 125612100 125612130 -14704635 + MER91 DNA MER1_type 35 64 -76 336 241 153 22 chr10 125612984 125613121 -14703644 + MIR3 SINE MIR 6 160 -48 1537 223 113 19 chr10 125613314 125613776 -14702989 + MLT1D LTR MaLR 1 505 0 1097 290 124 58 chr10 125614787 125615936 -14700829 + L2 LINE L2 1685 2909 -405 2063 127 0 3 chr10 125615962 125616262 -14700503 - AluSx SINE Alu -13 299 1 1641 177 37 0 chr10 125616961 125617141 -14699624 - AluJo SINE Alu -1 311 114 216 0 0 0 chr10 125617141 125617165 -14699600 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1641 177 37 0 chr10 125617165 125617284 -14699481 - AluJo SINE Alu -198 114 1 2587 132 52 2 chr10 125617874 125618276 -14698489 - MSTA LTR MaLR 0 428 7 346 269 26 77 chr10 125618497 125618653 -14698112 - MIR SINE MIR -25 237 90 219 163 41 20 chr10 125618988 125619037 -14697728 - MIR3 SINE MIR -5 203 154 1014 286 80 65 chr10 125619309 125619635 -14697130 + MLT1K LTR MaLR 5 345 -243 2165 118 0 3 chr10 125619635 125619948 -14696817 - AluSq SINE Alu -1 312 1 1014 286 80 65 chr10 125619948 125620195 -14696570 + MLT1K LTR MaLR 345 587 -1 970 275 22 58 chr10 125620228 125620588 -14696177 + MLT1H LTR MaLR 8 354 -195 1107 156 0 0 chr10 125620625 125620805 -14695960 - FRAM SINE Alu 0 176 1 264 88 53 0 chr10 125620811 125620868 -14695897 + (TA)n Simple_repeat Simple_repeat 1 60 0 825 149 0 0 chr10 125620868 125620989 -14695776 - FLAM_C SINE Alu -12 121 1 2169 118 0 0 chr10 125620998 125621303 -14695462 - AluSx SINE Alu -7 305 1 336 276 71 0 chr10 125621373 125621471 -14695294 + L2 LINE L2 3137 3241 -31 366 277 0 77 chr10 125622398 125622452 -14694313 - MIR3 SINE MIR -3 205 148 1452 160 42 49 chr10 125622452 125622758 -14694007 + AluJb SINE Alu 3 306 -6 366 277 0 77 chr10 125622758 125622833 -14693932 - MIR3 SINE MIR -60 148 86 264 30 0 0 chr10 125622879 125622912 -14693853 + (TC)n Simple_repeat Simple_repeat 1 33 0 914 154 0 0 chr10 125622917 125623060 -14693705 - AluJo/FRAM SINE Alu -36 276 134 1841 160 0 10 chr10 125623060 125623366 -14693399 - AluJb SINE Alu -9 303 1 2300 87 3 0 chr10 125623507 125623816 -14692949 - AluSx SINE Alu -2 310 1 2613 146 40 0 chr10 125623881 125624286 -14692479 + MSTB LTR MaLR 2 422 -4 1194 270 22 6 chr10 125625847 125626166 -14690599 + L1MEc LINE L1 79 402 -5994 1005 207 21 70 chr10 125626162 125626275 -14690490 + L1M4 LINE L1 2841 2958 -3188 * 2189 113 0 0 chr10 125626275 125626577 -14690188 + AluSx SINE Alu 1 302 -10 1005 207 21 70 chr10 125626577 125626792 -14689973 + L1M4 LINE L1 2958 3153 -2993 * 1567 209 42 35 chr10 125626780 125627210 -14689555 + L1M4 LINE L1 3509 3941 -2205 334 152 0 38 chr10 125627329 125627398 -14689367 + AluJb SINE Alu 173 221 -81 1891 134 3 0 chr10 125627474 125627782 -14688983 - AluSq SINE Alu 0 309 1 494 316 41 0 chr10 125628496 125628667 -14688098 - MIR SINE MIR -9 253 76 379 167 30 0 chr10 125628993 125629059 -14687706 + MER81 DNA DNA 43 110 -4 180 294 103 15 chr10 125629726 125629794 -14686971 - L2 LINE L2 -11 3261 3188 1026 167 18 70 chr10 125629817 125630044 -14686721 - MER20 DNA MER1_type -4 215 1 491 231 255 5 chr10 125630146 125630358 -14686407 - MER102b DNA MER1_type -4 337 73 597 261 17 28 chr10 125630543 125630723 -14686042 + MER5B DNA MER1_type 1 178 0 291 260 55 0 chr10 125630812 125630885 -14685880 + MIR SINE MIR 102 178 -84 215 271 129 0 chr10 125630921 125630951 -14685814 + MER5B DNA MER1_type 97 122 -56 216 0 0 0 chr10 125630951 125630975 -14685790 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 215 271 129 0 chr10 125630975 125631014 -14685751 + MER5B DNA MER1_type 122 175 -3 429 174 10 10 chr10 125632018 125632116 -14684649 + L1MC3 LINE L1 6914 7011 -774 8005 197 64 35 chr10 125632116 125632969 -14683796 + L1MD1 LINE L1 16 843 -5697 2204 94 0 0 chr10 125632969 125633257 -14683508 + AluSc SINE Alu 1 288 -21 8005 197 64 35 chr10 125633257 125633280 -14683485 + L1MD1 LINE L1 843 864 -5676 1761 154 17 20 chr10 125633280 125633578 -14683187 + AluJo SINE Alu 1 297 -15 8005 197 64 35 chr10 125633578 125633713 -14683052 + L1MD1 LINE L1 864 994 -5546 597 100 50 0 chr10 125633713 125633813 -14682952 + L1MA9 LINE L1 6203 6307 -5 8005 197 64 35 chr10 125633813 125635447 -14681318 + L1MD1 LINE L1 994 2898 -3642 791 172 0 0 chr10 125635448 125635570 -14681195 + FLAM_C SINE Alu 1 122 -11 9310 205 54 21 chr10 125636822 125637262 -14679503 + L1MD1 LINE L1 2914 3338 -3298 900 145 0 0 chr10 125637262 125637393 -14679372 + FLAM_C SINE Alu 1 131 -2 9310 205 54 21 chr10 125637393 125638300 -14678465 + L1MD1 LINE L1 3338 4214 -2422 216 0 0 0 chr10 125638300 125638324 -14678441 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 9310 205 54 21 chr10 125638324 125640592 -14676173 + L1MD1 LINE L1 4214 6636 0 2014 94 28 0 chr10 125641230 125641516 -14675249 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr10 125641667 125641690 -14675075 + AT_rich Low_complexity Low_complexity 1 23 0 4343 191 16 4 chr10 125641692 125642601 -14674164 + L1MB8 LINE L1 4503 5421 -744 904 96 0 0 chr10 125642601 125642752 -14674013 + AluY SINE Alu 166 311 0 3585 164 22 50 chr10 125642752 125643509 -14673256 + L1MB8 LINE L1 5420 6155 -23 1727 164 18 0 chr10 125643520 125643801 -14672964 - AluJb SINE Alu -26 286 1 38 39 0 0 chr10 125643809 125643861 -14672904 + AT_rich Low_complexity Low_complexity 1 52 0 353 226 43 0 chr10 125643878 125643971 -14672794 + L1MC3 LINE L1 6992 7088 -697 304 237 4 46 chr10 125643971 125644062 -14672703 + MLT1F1 LTR MaLR 35 143 -406 3319 160 20 3 chr10 125644063 125644656 -14672109 + L1MC3 LINE L1 7183 7785 0 1406 185 131 27 chr10 125644724 125645053 -14671712 - MLT1A1 LTR MaLR 0 365 3 327 65 0 0 chr10 125645606 125645652 -14671113 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 2051 119 0 0 chr10 125645652 125645938 -14670827 - AluSx SINE Alu -25 287 2 425 291 89 70 chr10 125645994 125646253 -14670512 + L1ME4a LINE L1 5561 5831 -290 1941 99 7 7 chr10 125646253 125646564 -14670201 + AluY SINE Alu 1 311 0 425 291 89 70 chr10 125646564 125646661 -14670104 + L1ME4a LINE L1 5831 5925 -196 488 217 78 48 chr10 125646847 125647013 -14669752 + MLT1J LTR MaLR 1 171 -340 2182 112 0 0 chr10 125647049 125647344 -14669421 + AluSx SINE Alu 1 295 -17 400 219 73 73 chr10 125647935 125647972 -14668793 - MER103 DNA DNA -1 165 129 2297 90 6 3 chr10 125647972 125648284 -14668481 + AluSp SINE Alu 1 313 0 400 219 73 73 chr10 125648284 125648410 -14668355 - MER103 DNA DNA -36 130 2 467 299 85 9 chr10 125648791 125649002 -14667763 - MIR SINE MIR -15 247 21 354 205 189 0 chr10 125649294 125649415 -14667350 - Charlie8 DNA MER1_type -2192 225 82 346 221 154 0 chr10 125649415 125649519 -14667246 + MLT1C LTR MaLR 1 120 -347 * 971 173 26 117 chr10 125649507 125649773 -14666992 + MLT1C LTR MaLR 224 465 -2 345 310 128 55 chr10 125649927 125650099 -14666666 + L2 LINE L2 2221 2379 -935 455 216 124 52 chr10 125650099 125650293 -14666472 - MER63A DNA MER1_type 0 210 3 345 310 128 55 chr10 125650293 125650520 -14666245 + L2 LINE L2 2379 2649 -665 591 291 122 8 chr10 125650614 125650861 -14665904 - MLT1K LTR MaLR -5 583 309 767 232 195 55 chr10 125650901 125651061 -14665704 + MLT1H LTR MaLR 35 171 -378 2489 58 0 0 chr10 125651061 125651370 -14665395 + AluY SINE Alu 1 309 -2 767 232 195 55 chr10 125651370 125651661 -14665104 + MLT1H LTR MaLR 171 549 0 1836 89 36 0 chr10 125651846 125652094 -14664671 + AluSq SINE Alu 1 257 -56 571 268 95 45 chr10 125652673 125652889 -14663876 - MIR SINE MIR 0 262 31 2326 90 7 0 chr10 125652889 125653199 -14663566 - AluSx SINE Alu 0 312 1 571 268 95 45 chr10 125653199 125653225 -14663540 - MIR SINE MIR -231 31 8 216 0 0 0 chr10 125653924 125653948 -14662817 + (A)n Simple_repeat Simple_repeat 1 24 0 635 185 147 6 chr10 125654211 125654368 -14662397 - MER53 DNA DNA -4 185 7 446 318 56 28 chr10 125655545 125655724 -14661041 + MIR SINE MIR 16 199 -63 295 173 200 27 chr10 125656027 125656102 -14660663 - MIR SINE MIR -64 198 111 408 255 50 65 chr10 125656852 125657014 -14659751 - MIR SINE MIR -62 146 11 2516 161 40 83 chr10 125657873 125658076 -14658689 + L1MD3 LINE L1 7384 7594 -401 2249 78 24 0 chr10 125658076 125658372 -14658393 + AluSc SINE Alu 1 303 -6 2516 161 40 83 chr10 125658372 125658502 -14658263 + L1MD3 LINE L1 7594 7728 -267 636 186 152 7 chr10 125658502 125658647 -14658118 + FRAM SINE Alu 1 166 0 2516 161 40 83 chr10 125658647 125658941 -14657824 + L1MD3 LINE L1 7728 7985 -10 1304 257 68 53 chr10 125659179 125659705 -14657060 + MLT1K LTR MaLR 34 567 -21 523 238 134 90 chr10 125659846 125660123 -14656642 - LTR16C LTR ERVL -28 463 175 2005 197 42 20 chr10 125660870 125661327 -14655438 + MLT1C LTR MaLR 1 467 0 2269 172 33 26 chr10 125661499 125661856 -14654909 + MSTA LTR MaLR 2 364 -64 2023 130 0 0 chr10 125661856 125662156 -14654609 + AluSx SINE Alu 1 300 -12 2269 172 33 26 chr10 125662156 125662222 -14654543 + MSTA LTR MaLR 364 428 0 394 149 68 0 chr10 125662243 125662317 -14654448 + MER103 DNA DNA 44 122 -44 403 281 31 8 chr10 125662900 125663028 -14653737 - MIR SINE MIR -24 238 108 284 274 34 124 chr10 125663136 125663370 -14653395 - L2 LINE L2 -81 3191 2979 670 255 57 33 chr10 125663554 125663766 -14652999 + MIR SINE MIR 25 241 -21 221 267 0 0 chr10 125664063 125664108 -14652657 + (CA)n Simple_repeat Simple_repeat 2 46 0 614 245 135 4 chr10 125665392 125665637 -14651128 + L1ME1 LINE L1 5885 6161 -5 251 270 99 9 chr10 125665659 125665770 -14650995 - L2 LINE L2 -421 2893 2773 1669 171 131 33 chr10 125665784 125665892 -14650873 - MLT1C LTR MaLR -6 461 365 3915 88 20 7 chr10 125665892 125666439 -14650326 + MER41A LTR ERV1 1 554 0 1669 171 131 33 chr10 125666439 125666750 -14650015 - MLT1C LTR MaLR -102 365 1 253 328 49 8 chr10 125666791 125666913 -14649852 + MIR SINE MIR 20 146 -62 1253 182 104 64 chr10 125667140 125667563 -14649202 - LTR7 LTR ERV1 -10 440 1 231 273 50 106 chr10 125667573 125667734 -14649031 - L2 LINE L2 -110 3162 3011 2018 192 43 25 chr10 125667790 125668119 -14648646 + MLT1D LTR MaLR 2 344 -161 2855 96 0 3 chr10 125668119 125668484 -14648281 + THE1B LTR MaLR 1 364 0 2018 192 43 25 chr10 125668484 125668644 -14648121 + MLT1D LTR MaLR 344 500 -5 627 272 135 24 chr10 125670202 125670618 -14646147 + LTR33 LTR ERVL 48 509 -12 426 245 10 0 chr10 125671328 125671430 -14645335 - LTR16C LTR ERVL -1 490 388 228 282 118 101 chr10 125672611 125672958 -14643807 - L2 LINE L2 -116 3156 2804 2279 95 10 0 chr10 125673301 125673597 -14643168 + AluSx SINE Alu 1 299 -13 463 302 95 5 chr10 125673674 125673863 -14642902 - L2 LINE L2 0 3313 3108 408 224 103 9 chr10 125673873 125673980 -14642785 + MER58 DNA MER1_type 1 117 -98 919 91 25 0 chr10 125673980 125674101 -14642664 + FLAM_C SINE Alu 1 124 -19 226 180 20 20 chr10 125674129 125674179 -14642586 + GA-rich Low_complexity Low_complexity 1 50 0 893 121 21 0 chr10 125674996 125675136 -14641629 + L1PA8 LINE L1 6027 6169 -3 1421 259 136 4 chr10 125675444 125675965 -14640800 + HAL1 LINE L1 122 711 -1796 789 161 21 120 chr10 125676233 125676425 -14640340 - MER5B DNA MER1_type -5 173 1 2171 238 130 49 chr10 125676430 125677466 -14639299 + HAL1 LINE L1 752 1871 -636 487 280 66 39 chr10 125677466 125677837 -14638928 + LTR67 LTR ERVL 105 555 -2 589 236 107 21 chr10 125677853 125678086 -14638679 + HAL1 LINE L1 1985 2237 -270 2189 78 17 30 chr10 125678128 125678424 -14638341 + AluY SINE Alu 1 292 -19 1992 233 75 31 chr10 125678429 125679001 -14637764 - MLT1E2 LTR MaLR -26 600 4 415 223 142 69 chr10 125679004 125679251 -14637514 + HAL1 LINE L1 2224 2488 -19 187 250 0 36 chr10 125679816 125679861 -14636904 + MER5B DNA MER1_type 1 45 -133 3084 72 30 0 chr10 125679861 125680264 -14636501 + L1PA10 LINE L1 5750 6164 -4 192 26 53 26 chr10 125680321 125680359 -14636406 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 285 125 0 94 chr10 125680375 125680439 -14636326 - MER5B DNA MER1_type -66 112 55 23 33 0 0 chr10 125680493 125680523 -14636242 + AT_rich Low_complexity Low_complexity 1 30 0 1313 161 0 19 chr10 125681056 125681267 -14635498 - AluJb SINE Alu -8 304 98 536 196 6 34 chr10 125681307 125681463 -14635302 - MIR SINE MIR -65 143 27 367 271 31 23 chr10 125682815 125682944 -14633821 + MIR SINE MIR 22 151 -111 1073 179 47 24 chr10 125683327 125683539 -14633226 - MER20 DNA MER1_type 0 219 3 582 234 36 29 chr10 125684322 125684459 -14632306 + MIR SINE MIR 94 231 -31 2284 122 0 3 chr10 125684944 125685255 -14631510 + AluSg SINE Alu 1 310 0 242 274 0 0 chr10 125686257 125686308 -14630457 - MIR SINE MIR -59 149 99 912 181 2 10 chr10 125686330 125686508 -14630257 + MLT1B LTR MaLR 1 176 -212 1811 130 84 3 chr10 125686510 125686795 -14629970 + AluSx SINE Alu 1 308 -4 11978 128 33 68 chr10 125686795 125687449 -14629316 + L1M4c LINE L1 14 689 -5695 2446 72 0 0 chr10 125687449 125687740 -14629025 + AluY SINE Alu 13 303 -8 11978 128 33 68 chr10 125687740 125688201 -14628564 + L1M4c LINE L1 689 1165 -5219 2373 84 7 0 chr10 125688201 125688498 -14628267 + AluY SINE Alu 1 299 -12 11978 128 33 68 chr10 125688498 125688867 -14627898 + L1M4c LINE L1 1165 1545 -4839 2024 167 0 0 chr10 125688867 125689179 -14627586 + AluJo SINE Alu 1 312 0 11978 128 33 68 chr10 125689179 125689380 -14627385 + L1M4c LINE L1 1545 1752 -4632 1791 146 59 0 chr10 125689380 125689701 -14627064 + L1MA5 LINE L1 5961 6300 0 11978 128 33 68 chr10 125689701 125690323 -14626442 + L1M4c LINE L1 1752 2236 -4148 2061 137 10 22 chr10 125690323 125690637 -14626128 + AluJo SINE Alu 1 310 -2 11978 128 33 68 chr10 125690637 125690774 -14625991 + L1M4c LINE L1 2236 2376 -4008 707 260 14 22 chr10 125690776 125691053 -14625712 + L1 LINE L1 3417 3691 -2691 1651 179 4 18 chr10 125691054 125691333 -14625432 + AluSx SINE Alu 1 275 -37 376 172 23 0 chr10 125691335 125691422 -14625343 + GA-rich Low_complexity Low_complexity 1 89 0 6827 170 18 48 chr10 125691425 125691961 -14624804 + L1 LINE L1 3714 4265 -2117 2133 133 13 0 chr10 125691961 125692262 -14624503 + AluSx SINE Alu 1 305 -7 6827 170 18 48 chr10 125692262 125692762 -14624003 + L1 LINE L1 4265 4779 -1603 2094 142 0 22 chr10 125692762 125693073 -14623692 + AluJb SINE Alu 1 304 -8 6827 170 18 48 chr10 125693073 125693451 -14623314 + L1 LINE L1 4779 5076 -1306 2147 136 0 0 chr10 125693451 125693746 -14623019 - AluSq SINE Alu -18 295 1 6827 170 18 48 chr10 125693746 125693955 -14622810 + L1 LINE L1 5076 5290 -1092 798 198 15 30 chr10 125693962 125694087 -14622678 + L1MB3 LINE L1 5983 6105 -78 425 147 13 0 chr10 125694087 125694162 -14622603 + MADE1 DNA Mariner 5 80 0 798 198 15 30 chr10 125694162 125694233 -14622532 + L1MB3 LINE L1 6105 6176 -7 1110 135 0 11 chr10 125694283 125694461 -14622304 + MLT1B LTR MaLR 215 390 0 2462 218 16 30 chr10 125694782 125695347 -14621418 + MER68 LTR ERV1 1 557 -5 4784 90 20 6 chr10 125695358 125696013 -14620752 - MER4A LTR ERV1 0 664 1 366 303 35 28 chr10 125696125 125696270 -14620495 - MER5A DNA MER1_type -23 166 21 249 33 0 0 chr10 125696504 125696534 -14620231 + (CA)n Simple_repeat Simple_repeat 2 31 0 197 114 86 0 chr10 125696604 125696639 -14620126 + MIR3 SINE MIR 166 203 -5 201 194 48 65 chr10 125697028 125697090 -14619675 + L2 LINE L2 3024 3084 -188 861 249 15 0 chr10 125697312 125697513 -14619252 + MLT1K LTR MaLR 137 340 -248 717 259 35 35 chr10 125697711 125697993 -14618772 + MLT1K LTR MaLR 296 577 -11 288 333 30 0 chr10 125698057 125698156 -14618609 - MIR SINE MIR -83 125 24 239 318 105 46 chr10 125698628 125699097 -14617668 - L1M2 LINE L1 -3318 3530 3019 2299 106 0 7 chr10 125699097 125699398 -14617367 - AluSg1 SINE Alu -10 299 1 239 318 105 46 chr10 125699398 125699510 -14617255 - L1M2 LINE L1 -3829 3019 2915 905 170 14 0 chr10 125699575 125699722 -14617043 - FRAM SINE Alu -15 161 13 461 306 59 14 chr10 125699729 125699936 -14616829 - L1M2 LINE L1 -3937 2911 2694 491 277 77 85 chr10 125700258 125700729 -14616036 - L1MEd LINE L1 -745 1745 1272 2300 101 3 3 chr10 125700729 125701025 -14615740 + AluSx SINE Alu 2 297 -15 491 277 77 85 chr10 125701025 125701520 -14615245 - L1MEd LINE L1 -1218 1272 676 931 310 73 38 chr10 125701695 125702260 -14614505 + ERVL LTR ERVL 1137 1753 -3940 262 286 11 11 chr10 125702284 125702375 -14614390 - MLT1G1 LTR MaLR -501 94 4 538 243 174 0 chr10 125702378 125702522 -14614243 + ERVL LTR ERVL 1844 2012 -3752 808 245 83 123 chr10 125702569 125703172 -14613593 - MLT1G1 LTR MaLR -13 582 4 335 327 19 0 chr10 125703212 125703316 -14613449 + ERVL LTR ERVL 1858 1963 -3033 661 264 27 18 chr10 125703319 125703608 -14613157 + ERVL LTR ERVL 4156 4457 -1028 2324 99 3 0 chr10 125703958 125704250 -14612515 + AluSg SINE Alu 1 293 -17 459 0 0 0 chr10 125704641 125704692 -14612073 + (TG)n Simple_repeat Simple_repeat 2 52 0 1941 118 79 0 chr10 125704710 125704990 -14611775 - AluSx SINE Alu -10 302 1 613 279 55 16 chr10 125705293 125705685 -14611080 - MLT1K LTR MaLR -8 580 140 2515 86 0 0 chr10 125706360 125706661 -14610104 + AluSx SINE Alu 1 301 -11 277 237 108 0 chr10 125706681 125706774 -14609991 - L1ME4a LINE L1 -81 6040 5938 239 278 19 0 chr10 125706919 125706973 -14609792 - MIR SINE MIR -59 149 95 563 319 24 5 chr10 125707725 125707932 -14608833 + MIR SINE MIR 16 226 -36 649 174 0 76 chr10 125707948 125707983 -14608782 - FLAM_A SINE Alu -169 133 97 2206 114 0 32 chr10 125707983 125708291 -14608474 + AluSx SINE Alu 1 298 -14 649 174 0 76 chr10 125708291 125708399 -14608366 - FLAM_A SINE Alu -205 97 1 2393 113 3 0 chr10 125708513 125708824 -14607941 - AluSx SINE Alu 0 312 1 211 255 0 0 chr10 125709348 125709395 -14607370 + C-rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr10 125709397 125709419 -14607346 + GC_rich Low_complexity Low_complexity 1 22 0 238 374 0 0 chr10 125709487 125709594 -14607171 + C-rich Low_complexity Low_complexity 1 107 0 226 210 20 44 chr10 125709619 125709827 -14606938 + C-rich Low_complexity Low_complexity 1 202 0 447 271 0 62 chr10 125709862 125710054 -14606711 + C-rich Low_complexity Low_complexity 1 180 0 310 71 0 0 chr10 125710163 125710205 -14606560 - MADE1 DNA Mariner -38 42 1 281 309 134 72 chr10 125710447 125710709 -14606056 - L2 LINE L2 -1 3271 2994 1075 101 7 0 chr10 125710714 125710853 -14605912 + AluSg/x SINE Alu 152 291 -19 250 200 0 0 chr10 125710853 125710908 -14605857 - L2 LINE L2 -299 2973 2919 241 233 198 0 chr10 125711452 125711568 -14605197 + L1MC/D LINE L1 5765 5903 -1905 237 132 0 0 chr10 125711595 125711633 -14605132 + (TG)n Simple_repeat Simple_repeat 2 39 0 196 176 329 12 chr10 125711666 125711751 -14605014 - MIR SINE MIR -79 183 72 354 286 54 27 chr10 125711842 125711954 -14604811 - L2 LINE L2 -8 3264 3150 2450 78 3 0 chr10 125712035 125712342 -14604423 - AluY SINE Alu -3 308 1 21 0 0 0 chr10 125712377 125712398 -14604367 + AT_rich Low_complexity Low_complexity 1 21 0 846 164 8 15 chr10 125712456 125712590 -14604175 - FLAM_A SINE Alu 0 133 1 2254 130 0 0 chr10 125712667 125712975 -14603790 - AluSx SINE Alu -4 308 1 996 192 19 19 chr10 125713157 125713371 -14603394 + MER20 DNA MER1_type 6 219 0 247 182 127 0 chr10 125713371 125713426 -14603339 - MIR SINE MIR -69 139 78 778 154 167 65 chr10 125713426 125713672 -14603093 + MLT1D LTR MaLR 1 271 -234 392 205 24 0 chr10 125713929 125714012 -14602753 + L1MC3 LINE L1 7679 7763 -22 2160 122 3 31 chr10 125714018 125714339 -14602426 - AluSx SINE Alu 0 312 1 2254 129 0 0 chr10 125714347 125714650 -14602115 - AluSq SINE Alu -10 303 1 1500 191 19 36 chr10 125714798 125715107 -14601658 - AluJo SINE Alu -8 304 1 846 131 0 8 chr10 125715137 125715259 -14601506 + FLAM_C SINE Alu 1 121 -22 2426 80 0 13 chr10 125715434 125715570 -14601195 + AluSx SINE Alu 1 137 -175 2317 70 0 26 chr10 125715570 125715872 -14600893 + AluSg SINE Alu 1 294 -16 2426 80 0 13 chr10 125715872 125716047 -14600718 + AluSx SINE Alu 137 308 -4 2076 104 49 0 chr10 125716606 125716893 -14599872 + AluSg SINE Alu 1 301 -9 2300 104 0 0 chr10 125716967 125717265 -14599500 + AluSg SINE Alu 5 302 -8 2133 103 0 80 chr10 125717470 125717809 -14598956 + AluSx SINE Alu 1 312 0 215 264 0 0 chr10 125718381 125718434 -14598331 - L2 LINE L2 0 3272 3220 2195 96 16 7 chr10 125718435 125718738 -14598027 + AluSx SINE Alu 1 306 -6 375 171 29 0 chr10 125719043 125719113 -14597652 - MER58 DNA MER1_type -139 76 5 2269 93 7 7 chr10 125719130 125719419 -14597346 + AluSx SINE Alu 5 293 -19 1423 149 0 5 chr10 125719425 125719639 -14597126 + AluSg/x SINE Alu 93 305 -5 2154 104 10 7 chr10 125719652 125719949 -14596816 + AluSq SINE Alu 1 298 -15 2055 265 288 20 chr10 125719959 125720863 -14595902 + L2 LINE L2 839 1499 -1814 2351 93 3 0 chr10 125720863 125721163 -14595602 + AluSx SINE Alu 3 303 -9 2251 123 0 0 chr10 125721170 125721462 -14595303 + AluSx SINE Alu 1 292 -20 2447 82 7 0 chr10 125721469 125721772 -14594993 + AluSg SINE Alu 1 305 -5 2563 68 0 0 chr10 125721780 125722091 -14594674 + AluY SINE Alu 1 311 0 2055 265 288 20 chr10 125722091 125722787 -14593978 + L2 LINE L2 1512 2020 -1293 2131 107 52 0 chr10 125722787 125723078 -14593687 - AluSx SINE Alu -6 306 1 2055 265 288 20 chr10 125723078 125723285 -14593480 + L2 LINE L2 2020 3312 -1 197 373 119 0 chr10 125723303 125723437 -14593328 + L2 LINE L2 3111 3260 -12 217 235 20 20 chr10 125724108 125724159 -14592606 + L2 LINE L2 3017 3067 -246 1766 179 10 0 chr10 125724168 125724459 -14592306 + AluJb SINE Alu 1 294 -18 848 93 0 0 chr10 125724560 125724668 -14592097 - AluSq SINE Alu -72 241 134 2070 122 11 0 chr10 125724668 125724981 -14591784 - AluY SINE Alu 0 316 1 470 271 53 38 chr10 125725109 125725242 -14591523 + L2 LINE L2 3138 3272 0 578 165 189 0 chr10 125725256 125725383 -14591382 + MLT1E3 LTR MaLR 1 151 -503 2136 130 3 32 chr10 125725404 125725720 -14591045 + AluSx SINE Alu 1 307 -5 1039 162 6 6 chr10 125725730 125725903 -14590862 + FRAM SINE Alu 4 176 0 1665 179 0 33 chr10 125726176 125726467 -14590298 + AluJb SINE Alu 2 284 -28 180 0 0 0 chr10 125726467 125726487 -14590278 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1093 224 107 58 chr10 125726550 125726934 -14589831 + MLT1E3 LTR MaLR 156 567 -57 2165 115 0 7 chr10 125726934 125727257 -14589508 - AluSq SINE Alu 0 321 1 1093 224 107 58 chr10 125727257 125727318 -14589447 + MLT1E3 LTR MaLR 567 624 0 2015 122 10 14 chr10 125727355 125727650 -14589115 - AluSx SINE Alu -18 294 1 2493 61 0 16 chr10 125727884 125728196 -14588569 - AluSc SINE Alu -2 307 1 924 197 14 52 chr10 125728208 125728421 -14588344 - AluJo SINE Alu -1 311 107 555 216 154 12 chr10 125728459 125728613 -14588152 + MIR SINE MIR 32 211 -51 1602 160 14 25 chr10 125728613 125728894 -14587871 - AluJb SINE Alu 0 312 35 2065 161 0 0 chr10 125729194 125729505 -14587260 + AluJb SINE Alu 1 311 -1 1115 167 118 16 chr10 125729507 125729752 -14587013 + L1MC3 LINE L1 7187 7456 -329 2140 130 3 0 chr10 125729752 125730083 -14586682 + AluSx SINE Alu 1 312 0 1035 184 0 0 chr10 125730084 125730258 -14586507 + AluSg/x SINE Alu 132 305 -5 2309 98 3 0 chr10 125730266 125730563 -14586202 + AluSg1 SINE Alu 1 298 -11 619 194 13 39 chr10 125730563 125730718 -14586047 + L1MC3 LINE L1 7613 7763 -22 702 128 8 8 chr10 125730824 125730941 -14585824 + FLAM_C SINE Alu 25 141 -2 1645 178 6 49 chr10 125730949 125731275 -14585490 + AluJo SINE Alu 1 312 0 2232 114 0 7 chr10 125731488 125731785 -14584980 + AluSx SINE Alu 1 295 -17 2196 116 36 0 chr10 125731785 125732086 -14584679 + AluSx SINE Alu 1 312 0 2611 161 46 64 chr10 125732333 125732806 -14583959 + MER68 LTR ERV1 1 464 -98 1684 181 14 3 chr10 125732806 125733098 -14583667 + AluJb SINE Alu 1 295 -17 2611 161 46 64 chr10 125733098 125733188 -14583577 + MER68 LTR ERV1 464 554 -8 334 299 75 0 chr10 125733280 125733414 -14583351 - MIR SINE MIR -97 165 22 1133 139 18 0 chr10 125733697 125733863 -14582902 - AluSg/x SINE Alu -10 302 134 2524 69 0 0 chr10 125733863 125734169 -14582596 - AluYa5 SINE Alu -1 310 5 1203 162 0 34 chr10 125734408 125734643 -14582122 + AluSg/x SINE Alu 86 312 0 346 294 59 80 chr10 125734753 125734954 -14581811 + L2 LINE L2 2975 3170 -143 1917 146 10 7 chr10 125734954 125735256 -14581509 - AluJo SINE Alu -9 303 1 346 294 59 80 chr10 125735256 125735343 -14581422 + L2 LINE L2 3170 3257 -56 180 0 0 0 chr10 125735358 125735378 -14581387 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 241 291 38 6 chr10 125735730 125735888 -14580877 + G-rich Low_complexity Low_complexity 3 165 0 26 50 0 0 chr10 125736045 125736085 -14580680 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr10 125736165 125736203 -14580562 + GC_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr10 125736329 125736363 -14580402 + GC_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr10 125736375 125736396 -14580369 + (CGCGG)n Simple_repeat Simple_repeat 4 24 0 198 342 57 16 chr10 125736506 125736699 -14580066 - MIR SINE MIR -34 228 28 1241 169 23 0 chr10 125737066 125737285 -14579480 - AluJb SINE Alu 0 312 89 983 144 130 74 chr10 125737485 125737700 -14579065 + AluJb SINE Alu 73 299 -13 1758 151 9 91 chr10 125737702 125738033 -14578732 + AluSx SINE Alu 1 304 -8 497 161 0 11 chr10 125738033 125738126 -14578639 - L1P5 LINE L1 -467 5689 5598 1497 197 41 17 chr10 125738131 125738426 -14578339 - AluJo SINE Alu -10 302 1 2056 123 3 20 chr10 125738551 125738844 -14577921 + AluSp SINE Alu 1 288 -25 1788 112 76 0 chr10 125738852 125739103 -14577662 + AluSx SINE Alu 30 299 -13 1273 424 17 0 chr10 125739185 125739487 -14577278 - AluSx SINE Alu -5 307 1 2299 97 0 7 chr10 125739986 125740286 -14576479 + AluSc SINE Alu 1 298 -11 21 36 0 0 chr10 125740560 125740588 -14576177 + AT_rich Low_complexity Low_complexity 1 28 0 1240 114 12 0 chr10 125740673 125740840 -14575925 - AluSq SINE Alu -15 298 130 1832 165 3 34 chr10 125740841 125741163 -14575602 - AluJo SINE Alu 0 312 1 1239 116 0 0 chr10 125741215 125741379 -14575386 - AluSg/x SINE Alu -5 305 142 2245 116 0 0 chr10 125741511 125741805 -14574960 - AluSg1 SINE Alu -15 294 1 369 188 98 0 chr10 125741917 125742029 -14574736 + L1MA4 LINE L1 6057 6179 -121 2061 109 23 30 chr10 125742032 125742334 -14574431 + AluSx SINE Alu 3 302 -10 794 156 8 0 chr10 125742384 125742506 -14574259 + FLAM_A SINE Alu 4 126 -7 201 191 24 0 chr10 125742711 125742753 -14574012 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 1999 148 0 7 chr10 125743532 125743829 -14572936 - AluJb SINE Alu -1 311 17 2380 97 0 3 chr10 125743893 125744201 -14572564 - AluSx SINE Alu -5 307 1 1791 172 3 46 chr10 125744221 125744547 -14572218 - AluJo SINE Alu 0 312 1 234 0 0 0 chr10 125745315 125745341 -14571424 + (CA)n Simple_repeat Simple_repeat 1 26 0 1893 189 0 0 chr10 125745808 125746120 -14570645 - AluSx SINE Alu 0 312 1 2588 7 0 7 chr10 125746433 125746713 -14570052 - AluYa5 SINE Alu -7 304 27 2284 114 0 0 chr10 125746815 125747114 -14569651 - AluSx SINE Alu -13 299 1 2182 127 0 34 chr10 125747708 125748030 -14568735 - AluSx SINE Alu -1 311 1 2079 114 0 0 chr10 125748162 125748435 -14568330 + AluSx SINE Alu 23 295 -17 2331 84 7 7 chr10 125748736 125749045 -14567720 + AluSg SINE Alu 1 309 -1 1897 167 3 10 chr10 125749723 125749888 -14566877 - AluJb SINE Alu -4 298 134 2341 96 0 22 chr10 125749888 125750061 -14566704 - AluSx SINE Alu -7 305 141 2031 89 55 20 chr10 125750061 125750354 -14566411 - AluSp SINE Alu -10 303 1 2341 96 0 22 chr10 125750354 125750492 -14566273 - AluSx SINE Alu -171 141 1 1897 167 3 10 chr10 125750492 125750626 -14566139 - AluJb SINE Alu -168 134 1 840 115 16 16 chr10 125750644 125750766 -14565999 - FLAM_C SINE Alu -10 123 2 22 0 0 0 chr10 125750770 125750792 -14565973 + AT_rich Low_complexity Low_complexity 1 22 0 2358 122 0 0 chr10 125751017 125751328 -14565437 + AluSx SINE Alu 2 312 0 906 189 97 24 chr10 125751698 125751904 -14564861 - MER58A DNA MER1_type 0 224 4 877 153 0 0 chr10 125752034 125752165 -14564600 - FLAM_C SINE Alu -12 131 1 618 167 68 68 chr10 125752354 125752486 -14564279 - AluJb SINE Alu -179 133 2 2413 85 0 16 chr10 125752496 125752803 -14563962 - AluSc SINE Alu -7 302 1 401 314 75 48 chr10 125752971 125753075 -14563690 + MIR SINE MIR 4 104 -158 1895 164 0 3 chr10 125753075 125753373 -14563392 + AluJo SINE Alu 1 297 -15 401 314 75 48 chr10 125753373 125753520 -14563245 + MIR SINE MIR 104 262 0 2251 113 7 3 chr10 125754036 125754337 -14562428 + AluSq SINE Alu 1 302 -11 216 299 205 8 chr10 125754361 125754478 -14562287 + MIR3 SINE MIR 33 172 -36 1196 92 67 0 chr10 125754656 125754820 -14561945 - AluSp SINE Alu -9 304 130 23 54 0 0 chr10 125754921 125754958 -14561807 + AT_rich Low_complexity Low_complexity 1 37 0 597 219 8 8 chr10 125754961 125755084 -14561681 + AluSp SINE Alu 2 124 -189 1214 193 12 28 chr10 125755210 125755464 -14561301 - AluSq SINE Alu -63 250 1 6810 66 9 52 chr10 125755498 125756496 -14560269 - SVA Other Other 0 1386 432 1440 147 4 4 chr10 125756539 125756771 -14559994 + AluY SINE Alu 74 305 -6 1014 188 0 0 chr10 125756774 125756934 -14559831 + AluJo/FRAM SINE Alu 137 296 -6 1883 155 3 16 chr10 125757028 125757332 -14559433 + AluJb SINE Alu 1 300 -12 25 0 0 0 chr10 125758533 125758558 -14558207 + AT_rich Low_complexity Low_complexity 1 25 0 731 129 52 0 chr10 125758615 125758731 -14558034 + AluSq/x SINE Alu 2 123 -190 1807 129 43 22 chr10 125758744 125758881 -14557884 + AluJb SINE Alu 1 134 -181 1963 120 12 74 chr10 125758881 125759207 -14557558 + AluSx SINE Alu 3 308 -4 1807 129 43 22 chr10 125759207 125759378 -14557387 + AluJb SINE Alu 134 315 0 1694 158 75 0 chr10 125759380 125759659 -14557106 + AluSx SINE Alu 1 300 -12 260 321 75 15 chr10 125760044 125760178 -14556587 + L1MC/D LINE L1 5501 5642 -2166 1507 47 0 0 chr10 125760309 125760478 -14556287 + AluY SINE Alu 1 169 -142 671 142 0 19 chr10 125760578 125760684 -14556081 + FRAM SINE Alu 57 160 -16 2354 96 0 0 chr10 125760758 125761059 -14555706 + AluSg1 SINE Alu 1 301 -8 448 281 90 6 chr10 125761132 125761310 -14555455 - L1ME LINE L1 -370 5751 5559 547 214 126 60 chr10 125761343 125761558 -14555207 - L1ME LINE L1 -2325 5483 5255 825 156 8 8 chr10 125761759 125761887 -14554878 - FLAM_C SINE Alu -11 132 5 2525 73 0 0 chr10 125762679 125762981 -14553784 + AluY SINE Alu 1 302 -9 198 0 0 0 chr10 125762983 125763005 -14553760 + (TTA)n Simple_repeat Simple_repeat 1 22 0 1070 163 74 16 chr10 125763013 125763203 -14553562 + AluJb SINE Alu 1 201 -111 457 255 28 0 chr10 125763232 125763338 -14553427 - L1ME LINE L1 -371 5799 5691 1073 213 108 18 chr10 125763345 125763409 -14553356 - L1ME1 LINE L1 -6 6229 6172 1905 174 7 0 chr10 125763409 125763714 -14553051 + AluJb SINE Alu 1 307 -5 1073 213 108 18 chr10 125763714 125763982 -14552783 - L1ME1 LINE L1 -63 6172 5867 1378 121 27 27 chr10 125763982 125764206 -14552559 + THE1C LTR MaLR 1 224 -151 1939 127 18 7 chr10 125764219 125764502 -14552263 + AluSg SINE Alu 4 289 -21 2283 109 3 0 chr10 125764502 125764796 -14551969 + AluSp SINE Alu 1 295 -18 1262 289 67 37 chr10 125764921 125765315 -14551450 - L1ME1 LINE L1 -559 5672 5292 2295 104 0 0 chr10 125765315 125765613 -14551152 - AluSx SINE Alu -14 298 1 1262 289 67 37 chr10 125765613 125766398 -14550367 - L1ME1 LINE L1 -939 5292 4492 2133 102 39 0 chr10 125766414 125766699 -14550066 + AluSx SINE Alu 1 296 -16 2396 78 0 7 chr10 125766703 125766998 -14549767 + AluSp SINE Alu 2 294 -19 1448 134 149 8 chr10 125767321 125767583 -14549182 + AluJb SINE Alu 1 299 -3 1080 267 125 27 chr10 125767684 125768139 -14548626 - L1ME1 LINE L1 -1756 4459 4050 1887 146 20 13 chr10 125768139 125768440 -14548325 - AluSx SINE Alu -9 303 1 1080 267 125 27 chr10 125768440 125768808 -14547957 - L1ME1 LINE L1 -2165 4050 3518 2249 123 0 0 chr10 125768864 125769164 -14547601 - AluSx SINE Alu -12 300 1 300 229 48 0 chr10 125769199 125769282 -14547483 - L1ME1 LINE L1 -2864 3351 3265 705 132 116 16 chr10 125769285 125769406 -14547359 + FLAM_C SINE Alu 1 133 0 841 279 100 52 chr10 125769520 125769631 -14547134 - L1ME1 LINE L1 -3313 2902 2798 502 217 113 9 chr10 125769631 125769746 -14547019 - FLAM_A SINE Alu -6 127 1 841 279 100 52 chr10 125769746 125770421 -14546344 - L1ME1 LINE L1 -3417 2798 2121 1912 152 0 0 chr10 125770444 125770727 -14546038 + AluJb SINE Alu 23 305 -7 2671 49 0 0 chr10 125770955 125771259 -14545506 + AluY SINE Alu 1 304 -7 520 27 80 13 chr10 125771481 125771556 -14545209 - MADE1 DNA Mariner 0 80 1 234 0 0 0 chr10 125771663 125771689 -14545076 + (CA)n Simple_repeat Simple_repeat 2 27 0 1206 195 94 98 chr10 125771873 125772005 -14544760 + MLT1D LTR MaLR 2 133 -372 2330 107 0 0 chr10 125772005 125772304 -14544461 + AluSx SINE Alu 1 299 -13 1206 195 94 98 chr10 125772304 125772673 -14544092 + MLT1D LTR MaLR 133 501 -4 336 280 21 0 chr10 125772688 125772781 -14543984 + L2 LINE L2 3117 3211 -61 306 275 53 38 chr10 125772800 125772931 -14543834 - MIR3 SINE MIR -16 192 60 2076 125 7 0 chr10 125773135 125773424 -14543341 + AluSx SINE Alu 1 291 -21 305 260 14 0 chr10 125773629 125773702 -14543063 - MER91B DNA MER1_type -27 163 90 352 137 120 111 chr10 125773717 125773834 -14542931 - MER91B DNA MER1_type -61 129 12 224 260 207 53 chr10 125774188 125774357 -14542408 + MIR SINE MIR 68 262 0 1225 130 84 14 chr10 125775132 125775347 -14541418 + MER30 DNA MER1_type 1 230 0 2294 108 0 0 chr10 125775392 125775689 -14541076 + AluSx SINE Alu 6 302 -10 268 239 62 62 chr10 125775911 125776087 -14540678 - MLT1L LTR MaLR -326 289 114 335 254 52 129 chr10 125778153 125778223 -14538542 + MIR3 SINE MIR 31 105 -103 2113 133 17 0 chr10 125778223 125778517 -14538248 + AluSx SINE Alu 1 299 -13 335 254 52 129 chr10 125778517 125778568 -14538197 + MIR3 SINE MIR 105 134 -74 863 135 0 15 chr10 125778568 125778701 -14538064 + FLAM_C SINE Alu 3 133 0 335 254 52 129 chr10 125778701 125778771 -14537994 + MIR3 SINE MIR 134 208 0 943 128 0 0 chr10 125779189 125779322 -14537443 + FLAM_C SINE Alu 1 133 0 236 69 35 52 chr10 125779338 125779371 -14537394 + (GAAA)n Simple_repeat Simple_repeat 3 36 -23 1574 102 5 5 chr10 125779371 125779586 -14537179 + AluSg SINE Alu 1 215 -95 236 69 35 52 chr10 125779586 125779610 -14537155 + (GAAA)n Simple_repeat Simple_repeat 36 59 0 915 36 0 0 chr10 125779610 125779721 -14537044 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 200 261 0 0 chr10 125780342 125780388 -14536377 + C-rich Low_complexity Low_complexity 2 47 0 21 36 0 0 chr10 125780561 125780589 -14536176 + GC_rich Low_complexity Low_complexity 1 28 0 213 193 48 36 chr10 125780637 125780720 -14536045 + (CGGGG)n Simple_repeat Simple_repeat 2 85 0 25 51 0 0 chr10 125780730 125780769 -14535996 + GC_rich Low_complexity Low_complexity 1 39 0 38 66 0 28 chr10 125780791 125780897 -14535868 + GC_rich Low_complexity Low_complexity 1 103 0 24 63 0 16 chr10 125781105 125781148 -14535617 + GC_rich Low_complexity Low_complexity 1 44 -18 216 111 0 0 chr10 125781148 125781184 -14535581 + (CGA)n Simple_repeat Simple_repeat 1 36 0 24 63 0 16 chr10 125781184 125781203 -14535562 + GC_rich Low_complexity Low_complexity 44 62 0 198 103 0 0 chr10 125781339 125781368 -14535397 + (CCG)n Simple_repeat Simple_repeat 2 30 0 30 77 0 0 chr10 125781391 125781456 -14535309 + GC_rich Low_complexity Low_complexity 1 65 0 31 0 0 0 chr10 125781649 125781680 -14535085 + GC_rich Low_complexity Low_complexity 1 31 0 2117 83 31 7 chr10 125783959 125784247 -14532518 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr10 125787314 125787337 -14529428 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr10 125787881 125787931 -14528834 + AT_rich Low_complexity Low_complexity 1 50 0 472 273 128 11 chr10 125788521 125788708 -14528057 - MER3 DNA MER1_type 0 209 1 2435 57 33 3 chr10 125788945 125789245 -14527520 - AluSq SINE Alu -4 309 1 203 227 0 68 chr10 125789308 125789396 -14527369 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 21 0 0 0 chr10 125789500 125789521 -14527244 + AT_rich Low_complexity Low_complexity 1 21 0 1963 133 23 19 chr10 125789679 125789988 -14526777 + AluSx SINE Alu 1 310 -2 1638 191 48 39 chr10 125790365 125790426 -14526339 - MER82 DNA MER2_type -270 383 324 1777 162 14 3 chr10 125790426 125790723 -14526042 + AluJb SINE Alu 1 300 -12 1638 191 48 39 chr10 125790723 125791018 -14525747 - MER82 DNA MER2_type -329 324 24 195 360 121 26 chr10 125791239 125791578 -14525187 - L2 LINE L2 -654 2660 2290 2287 97 3 13 chr10 125791627 125791762 -14525003 + AluSx SINE Alu 1 136 -176 2383 89 3 0 chr10 125791762 125792066 -14524699 + AluY SINE Alu 1 305 -6 2287 97 3 13 chr10 125792066 125792229 -14524536 + AluSx SINE Alu 136 296 -16 1848 147 3 17 chr10 125792323 125792616 -14524149 + AluJb SINE Alu 1 289 -23 25 0 0 0 chr10 125793829 125793854 -14522911 + AT_rich Low_complexity Low_complexity 1 25 0 697 124 53 0 chr10 125793911 125794024 -14522741 + AluSq/x SINE Alu 2 120 -192 1791 129 43 22 chr10 125794040 125794177 -14522588 + AluJb SINE Alu 1 134 -181 1929 117 12 74 chr10 125794177 125794503 -14522262 + AluSx SINE Alu 3 308 -4 1791 129 43 22 chr10 125794503 125794674 -14522091 + AluJb SINE Alu 134 315 0 1666 154 77 0 chr10 125794676 125794949 -14521816 + AluSx SINE Alu 1 294 -18 284 313 75 15 chr10 125795340 125795474 -14521291 + L1MC/D LINE L1 5501 5642 -2166 2231 99 7 7 chr10 125795605 125795907 -14520858 + AluY SINE Alu 1 302 -9 1992 167 0 0 chr10 125795971 125796283 -14520482 - AluSx SINE Alu 0 312 1 1249 133 43 38 chr10 125796694 125796905 -14519860 - AluJo SINE Alu -100 212 1 1994 121 7 0 chr10 125797715 125797987 -14518778 + AluSq SINE Alu 1 274 -39 2098 104 7 7 chr10 125798024 125798304 -14518461 + AluSg SINE Alu 1 280 -30 364 250 10 19 chr10 125799567 125799671 -14517094 - MER5A DNA MER1_type -83 106 4 2128 114 13 3 chr10 125799707 125800005 -14516760 - AluSg SINE Alu -9 301 1 1854 133 3 101 chr10 125800216 125800554 -14516211 + AluSq SINE Alu 1 305 -8 740 156 91 91 chr10 125800633 125800819 -14515946 + AluSg/x SINE Alu 126 311 -1 12245 130 52 83 chr10 125802634 125802832 -14513933 - Tigger1 DNA MER2_type 0 2418 2215 509 194 0 0 chr10 125802832 125802925 -14513840 + FLAM_A SINE Alu 45 137 -5 12245 130 52 83 chr10 125802925 125803396 -14513369 - Tigger1 DNA MER2_type -203 2215 1731 1577 146 59 28 chr10 125803396 125803407 -14513358 - AluJb SINE Alu -15 297 288 279 0 0 0 chr10 125803407 125803438 -14513327 + (TG)n Simple_repeat Simple_repeat 2 32 0 1577 146 59 28 chr10 125803438 125803714 -14513051 - AluJb SINE Alu -24 288 1 12245 130 52 83 chr10 125803714 125804468 -14512297 - Tigger1 DNA MER2_type -687 1731 955 1425 196 16 42 chr10 125804468 125804774 -14511991 + AluJo SINE Alu 1 298 -14 12245 130 52 83 chr10 125804774 125804958 -14511807 - Tigger1 DNA MER2_type -1463 955 767 189 0 0 0 chr10 125804958 125804979 -14511786 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1949 129 4 0 chr10 125804979 125805259 -14511506 - AluSq SINE Alu -32 281 1 12245 130 52 83 chr10 125805259 125805471 -14511294 - Tigger1 DNA MER2_type -1650 768 551 2026 116 7 45 chr10 125805471 125805781 -14510984 + AluSp SINE Alu 1 298 -15 12245 130 52 83 chr10 125805781 125805966 -14510799 - Tigger1 DNA MER2_type -1867 551 362 2023 125 7 7 chr10 125805966 125806255 -14510510 + AluSx SINE Alu 1 289 -23 12245 130 52 83 chr10 125806255 125806600 -14510165 - Tigger1 DNA MER2_type -2056 362 48 570 167 0 0 chr10 125806639 125806729 -14510036 + AluJ/FLAM SINE Alu 12 101 -211 274 125 0 0 chr10 125806730 125806770 -14509995 - Tigger1 DNA MER2_type -2377 41 2 28 0 0 0 chr10 125806770 125806798 -14509967 + AT_rich Low_complexity Low_complexity 1 28 0 927 193 53 31 chr10 125807283 125807511 -14509254 + L1MB8 LINE L1 5888 6120 -58 266 65 65 43 chr10 125807500 125807546 -14509219 - L1MB8 LINE L1 -17 6161 6115 * 1459 115 14 0 chr10 125808314 125808531 -14508234 + MER46B DNA MER2_type 2 96 -140 2266 111 3 0 chr10 125808531 125808828 -14507937 + AluSq SINE Alu 1 298 -15 1937 134 10 7 chr10 125809646 125809938 -14506827 + AluSx SINE Alu 9 301 -11 267 218 143 30 chr10 125811335 125811468 -14505297 + L1ME LINE L1 5582 5729 -392 22 0 0 0 chr10 125811761 125811783 -14504982 + AT_rich Low_complexity Low_complexity 1 22 0 265 178 0 0 chr10 125812726 125812771 -14503994 + L1ME LINE L1 5689 5733 -437 235 221 137 0 chr10 125812783 125812878 -14503887 + L1ME LINE L1 5777 5884 -286 2249 100 7 26 chr10 125813782 125814092 -14502673 - AluSx SINE Alu -8 304 1 192 277 0 0 chr10 125814757 125814804 -14501961 + L2 LINE L2 3224 3270 -2 1787 162 24 0 chr10 125814842 125815132 -14501633 + AluSx SINE Alu 1 297 -15 180 325 38 38 chr10 125815136 125815216 -14501549 + MER5A DNA MER1_type 73 152 -37 2329 134 55 31 chr10 125815367 125815743 -14501022 + MSTA LTR MaLR 1 389 -39 2211 113 0 7 chr10 125815743 125816044 -14500721 - AluSx SINE Alu -9 303 5 2329 134 55 31 chr10 125816044 125816085 -14500680 + MSTA LTR MaLR 389 428 0 2553 68 0 0 chr10 125816874 125817181 -14499584 + AluY SINE Alu 1 307 -4 2254 103 10 3 chr10 125817266 125817576 -14499189 + AluSx SINE Alu 1 312 0 251 315 87 0 chr10 125817741 125817833 -14498932 + MIR SINE MIR 20 119 -143 2141 117 3 13 chr10 125817970 125818268 -14498497 + AluSq SINE Alu 1 295 -18 1356 209 13 27 chr10 125818344 125818645 -14498120 + AluJo SINE Alu 1 297 -15 2428 92 0 0 chr10 125818854 125819148 -14497617 - AluSx SINE Alu -18 294 1 259 208 50 108 chr10 125819671 125819791 -14496974 - MIR SINE MIR -80 182 70 2200 112 30 3 chr10 125820443 125820746 -14496019 - AluSq SINE Alu -2 311 1 2445 99 0 3 chr10 125821059 125821373 -14495392 - AluSq SINE Alu 0 313 1 1452 224 20 0 chr10 125821949 125822243 -14494522 - MLT1A1 LTR MaLR 0 365 66 1742 199 36 11 chr10 125822810 125823166 -14493599 + MLT1A1 LTR MaLR 1 365 0 810 256 3 63 chr10 125823433 125823563 -14493202 + L1MC1 LINE L1 5488 5624 -497 2346 103 0 7 chr10 125823563 125823873 -14492892 + AluSg SINE Alu 3 310 0 810 256 3 63 chr10 125823873 125824059 -14492706 + L1MC1 LINE L1 5624 5785 -336 * 1539 207 25 17 chr10 125824055 125824236 -14492529 + L1MC4 LINE L1 7444 7622 -420 2014 149 7 3 chr10 125824236 125824545 -14492220 + AluJb SINE Alu 1 310 -2 1539 207 25 17 chr10 125824545 125824768 -14491997 + L1MC4 LINE L1 7622 7851 -191 2109 107 31 7 chr10 125824786 125825076 -14491689 + AluSq SINE Alu 1 297 -16 2229 114 3 0 chr10 125825155 125825445 -14491320 + AluSx SINE Alu 1 291 -21 636 332 79 37 chr10 125825618 125826245 -14490520 - L2 LINE L2 -8 3264 2625 921 255 138 19 chr10 125826485 125826861 -14489904 - LTR16C LTR ERVL 0 491 71 1828 140 10 27 chr10 125826964 125827256 -14489509 + AluJo SINE Alu 11 297 -15 233 281 31 21 chr10 125827299 125827395 -14489370 - L2 LINE L2 -665 2649 2553 1325 238 74 55 chr10 125827449 125827967 -14488798 - MER39 LTR ERV1 0 707 1 345 256 200 20 chr10 125827967 125828162 -14488603 - L2 LINE L2 -844 2470 2241 1727 180 44 19 chr10 125828167 125828516 -14488249 + L1MC1 LINE L1 5962 6322 -11 2187 132 3 0 chr10 125828516 125828819 -14487946 + AluSx SINE Alu 1 304 -8 1727 180 44 19 chr10 125828819 125828831 -14487934 + L1MC1 LINE L1 6322 6332 -1 2438 90 0 3 chr10 125828838 125829138 -14487627 + AluSq SINE Alu 1 299 -14 1764 163 29 23 chr10 125829454 125829760 -14487005 + AluJo SINE Alu 1 308 -4 255 61 0 0 chr10 125830140 125830173 -14486592 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 316 268 79 37 chr10 125830173 125830337 -14486428 - L1MCa LINE L1 -4038 2388 2218 2259 137 0 0 chr10 125830402 125830709 -14486056 - AluSx SINE Alu -5 307 1 305 387 52 21 chr10 125830761 125830955 -14485810 - L2 LINE L2 0 3272 3073 1890 122 0 8 chr10 125831760 125832022 -14484743 - AluSq SINE Alu -53 260 1 22 0 0 0 chr10 125832123 125832145 -14484620 + AT_rich Low_complexity Low_complexity 1 22 0 1976 154 3 10 chr10 125832194 125832499 -14484266 - AluJo SINE Alu -9 303 1 2333 111 0 19 chr10 125832526 125832841 -14483924 + AluSg SINE Alu 1 309 -1 1871 147 68 0 chr10 125833055 125833168 -14483597 + AluSx SINE Alu 1 105 -207 253 0 54 0 chr10 125833168 125833205 -14483560 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1871 147 68 0 chr10 125833205 125833383 -14483382 + AluSx SINE Alu 105 312 0 326 338 113 0 chr10 125833470 125833630 -14483135 - MIR SINE MIR 0 262 85 195 292 15 15 chr10 125833677 125833742 -14483023 - MIR SINE MIR -186 76 12 404 188 24 0 chr10 125833745 125833830 -14482935 + MER20 DNA MER1_type 1 87 -132 1959 128 3 39 chr10 125833906 125834211 -14482554 + AluSx SINE Alu 3 296 -16 2557 57 0 3 chr10 125834512 125834813 -14481952 + AluY SINE Alu 1 300 -11 1830 160 4 7 chr10 125834829 125835134 -14481631 + AluJo SINE Alu 16 312 0 526 250 7 57 chr10 125835141 125835281 -14481484 + MIR SINE MIR 28 160 -102 2105 120 4 0 chr10 125835283 125835558 -14481207 + AluSx SINE Alu 1 276 -36 261 0 0 0 chr10 125835559 125835588 -14481177 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 625 221 150 19 chr10 125835841 125836054 -14480711 - MIR SINE MIR -13 249 9 2114 121 17 0 chr10 125836207 125836496 -14480269 + AluSx SINE Alu 1 294 -18 2316 82 3 48 chr10 125836669 125836984 -14479781 + AluSp SINE Alu 1 301 -12 752 132 61 0 chr10 125837406 125837520 -14479245 + FLAM_C SINE Alu 10 130 -13 246 292 6 106 chr10 125837651 125837812 -14478953 + MIR3 SINE MIR 49 193 -15 896 149 0 8 chr10 125837821 125837992 -14478773 - FLAM_C SINE Alu 0 170 1 1808 153 22 72 chr10 125838004 125838150 -14478615 - L1MB5 LINE L1 0 6174 6022 8686 24 1 291 chr10 125838150 125840073 -14476692 + SVA Other Other 22 1386 0 1808 153 22 72 chr10 125840073 125840107 -14476658 - L1MB5 LINE L1 -152 6022 5988 2047 121 3 63 chr10 125840107 125840438 -14476327 + AluSx SINE Alu 1 311 -1 1808 153 22 72 chr10 125840438 125840660 -14476105 - L1MB5 LINE L1 -186 5988 5791 2205 130 0 0 chr10 125840671 125840971 -14475794 - AluSq SINE Alu -13 300 1 2385 108 0 10 chr10 125841188 125841502 -14475263 + AluSx SINE Alu 1 311 -1 2286 94 0 55 chr10 125841600 125841930 -14474835 + AluSx SINE Alu 1 312 0 312 280 98 50 chr10 125842882 125843041 -14473724 + MIR SINE MIR 52 216 -46 1859 121 68 4 chr10 125843212 125843493 -14473272 + AluJb SINE Alu 1 299 -13 2226 86 31 3 chr10 125843705 125843997 -14472768 - AluSg SINE Alu -10 300 1 491 189 183 20 chr10 125844417 125844570 -14472195 + MER5B DNA MER1_type 1 178 0 2262 107 0 17 chr10 125845291 125845591 -14471174 + AluSx SINE Alu 1 295 -17 2320 54 0 4 chr10 125845680 125845958 -14470807 + AluY SINE Alu 1 277 -34 1644 159 98 6 chr10 125846323 125846638 -14470127 - MER2 DNA MER2_type 0 344 1 2335 98 0 10 chr10 125847744 125848051 -14468714 - AluSq SINE Alu -9 304 1 2294 85 0 0 chr10 125848141 125848454 -14468311 + AluY SINE Alu 1 313 0 886 138 22 14 chr10 125848466 125848604 -14468161 + FRAM SINE Alu 18 156 -20 410 279 130 13 chr10 125848622 125848776 -14467989 + MIR SINE MIR 43 214 -48 872 144 0 0 chr10 125849109 125849227 -14467538 + FLAM_C SINE Alu 1 118 -15 25 31 0 0 chr10 125849227 125849259 -14467506 + AT_rich Low_complexity Low_complexity 1 32 0 531 235 70 80 chr10 125849537 125849737 -14467028 + MIR SINE MIR 31 228 -34 2457 57 0 0 chr10 125850039 125850349 -14466416 + AluY SINE Alu 1 310 0 2390 92 0 7 chr10 125850460 125850765 -14466000 - AluSg SINE Alu -6 304 2 822 190 23 23 chr10 125851222 125851396 -14465369 + FAM SINE Alu 2 175 0 21 0 0 0 chr10 125851928 125851949 -14464816 + AT_rich Low_complexity Low_complexity 1 21 0 2337 48 24 3 chr10 125852393 125852683 -14464082 - AluY SINE Alu -15 296 1 475 253 174 87 chr10 125853835 125854453 -14462312 - L2 LINE L2 -2 3311 2640 248 299 121 38 chr10 125854552 125854709 -14462056 - L2 LINE L2 -168 3104 2935 472 249 160 13 chr10 125854761 125854986 -14461779 - MIR SINE MIR -2 260 3 438 239 52 8 chr10 125855170 125855304 -14461461 + MER45A DNA AcHobo 39 178 0 27 29 0 0 chr10 125855648 125855682 -14461083 + GC_rich Low_complexity Low_complexity 1 34 0 206 276 11 23 chr10 125855846 125855933 -14460832 + (CCGGG)n Simple_repeat Simple_repeat 2 87 0 1030 207 48 0 chr10 125856273 125856524 -14460241 - Charlie5 DNA MER1_type 0 2624 2362 269 217 80 66 chr10 125856946 125857046 -14459719 + MIR3 SINE MIR 66 166 -42 1939 74 4 4 chr10 125857315 125857559 -14459206 - AluSp SINE Alu -6 307 64 1983 115 10 42 chr10 125857677 125857990 -14458775 + AluSq SINE Alu 1 303 -10 269 173 0 0 chr10 125858099 125858151 -14458614 + AluSp/q SINE Alu 252 303 0 232 252 36 18 chr10 125858160 125858271 -14458494 + L1ME4a LINE L1 5967 6079 -42 1900 174 3 16 chr10 125858281 125858597 -14458168 + AluJo SINE Alu 1 312 0 207 133 0 0 chr10 125859926 125859971 -14456794 + (T)n Simple_repeat Simple_repeat 1 45 0 1396 203 43 30 chr10 125859973 125860274 -14456491 + AluJo SINE Alu 1 305 -7 1912 87 0 38 chr10 125860535 125860800 -14455965 + AluSq SINE Alu 57 311 -2 2262 96 3 32 chr10 125860840 125861152 -14455613 - AluSg SINE Alu -7 303 1 1387 168 19 27 chr10 125861194 125861456 -14455309 - AluJo SINE Alu -24 288 29 2248 116 0 10 chr10 125862068 125862379 -14454386 - AluSx SINE Alu -2 310 3 1780 190 0 0 chr10 125862383 125862678 -14454087 - AluJo SINE Alu -17 295 1 2367 95 16 0 chr10 125862735 125863040 -14453725 - AluSx SINE Alu -2 310 1 2354 112 0 6 chr10 125863918 125864232 -14452533 - AluSx SINE Alu 0 312 1 251 333 117 38 chr10 125864323 125864536 -14452229 + MIR SINE MIR 12 241 -21 2177 117 0 20 chr10 125864939 125865238 -14451527 - AluSx SINE Alu -19 293 1 761 205 37 6 chr10 125865261 125865422 -14451343 - MIR SINE MIR -49 213 48 2333 96 0 0 chr10 125865586 125865879 -14450886 + AluSq SINE Alu 1 293 -20 346 135 0 0 chr10 125866482 125866534 -14450231 - MLT2C1 LTR ERVL -1 519 468 1849 154 0 3 chr10 125866537 125866829 -14449936 - AluSx SINE Alu -21 291 1 538 132 0 0 chr10 125866896 125866972 -14449793 - AluJ/FLAM SINE Alu -234 78 3 1555 183 62 28 chr10 125866974 125867178 -14449587 - MLT2C1 LTR ERVL -37 427 231 2278 92 0 0 chr10 125867178 125867481 -14449284 - AluSx SINE Alu -7 305 3 1555 183 62 28 chr10 125867481 125867594 -14449171 - MLT2C1 LTR ERVL -233 231 34 1688 175 26 0 chr10 125867947 125868250 -14448515 - AluJb SINE Alu -1 311 1 1703 108 0 16 chr10 125868852 125869103 -14447662 + AluSx SINE Alu 58 304 -8 1401 224 92 51 chr10 125869177 125869266 -14447499 - L1ME1 LINE L1 -5 6161 6077 1557 151 38 34 chr10 125869266 125869558 -14447207 + AluJo SINE Alu 1 293 -19 2199 105 0 3 chr10 125869562 125869868 -14446897 + AluSx SINE Alu 1 305 -7 1401 224 92 51 chr10 125869868 125869940 -14446825 - L1ME1 LINE L1 -91 6075 6007 201 39 0 0 chr10 125869940 125869966 -14446799 + (CCCCCA)n Simple_repeat Simple_repeat 3 28 0 1401 224 92 51 chr10 125869966 125869985 -14446780 - L1ME1 LINE L1 -159 6007 5990 2199 98 0 7 chr10 125869985 125870291 -14446474 - AluSc SINE Alu -5 304 1 1401 224 92 51 chr10 125870291 125870594 -14446171 - L1ME1 LINE L1 -176 5990 5651 1324 171 67 19 chr10 125870684 125870979 -14445786 - AluJo SINE Alu 0 308 1 2223 85 0 0 chr10 125871604 125871911 -14444854 - AluSx SINE Alu 0 307 1 1476 181 0 0 chr10 125872233 125872492 -14444273 + AluJb SINE Alu 42 300 -12 1924 140 0 3 chr10 125873197 125873490 -14443275 - AluSx SINE Alu -20 292 1 241 319 89 0 chr10 125873797 125873932 -14442833 + MIR3 SINE MIR 51 197 -11 2153 88 10 10 chr10 125874516 125874823 -14441942 + AluSx SINE Alu 6 312 0 351 65 0 0 chr10 125874904 125874950 -14441815 + (CA)n Simple_repeat Simple_repeat 2 47 0 1890 149 7 10 chr10 125875253 125875561 -14441204 + AluJo SINE Alu 1 307 -5 1970 163 100 42 chr10 125875563 125875775 -14440990 - Tigger2a DNA MER2_type -2274 434 236 1912 121 36 16 chr10 125875775 125876080 -14440685 + AluSx SINE Alu 1 311 -1 1970 163 100 42 chr10 125876080 125876277 -14440488 - Tigger2a DNA MER2_type -2472 236 1 745 193 81 30 chr10 125876440 125876637 -14440128 + MER3 DNA MER1_type 3 209 0 21 0 0 0 chr10 125876645 125876666 -14440099 + AT_rich Low_complexity Low_complexity 1 21 0 299 252 261 26 chr10 125876669 125876784 -14439981 + MIR SINE MIR 36 177 -85 2437 48 0 3 chr10 125876910 125877204 -14439561 - AluY SINE Alu -18 293 1 853 159 0 22 chr10 125877464 125877602 -14439163 + AluJo SINE Alu 2 136 -176 1162 168 9 19 chr10 125877602 125877736 -14439029 + AluJo SINE Alu 1 134 -178 1288 184 114 29 chr10 125877736 125878008 -14438757 + AluJb SINE Alu 1 295 -7 1162 168 9 19 chr10 125878008 125878087 -14438678 + AluJo SINE Alu 134 212 -100 2471 56 0 3 chr10 125878347 125878652 -14438113 + AluY SINE Alu 1 304 -7 1359 75 0 16 chr10 125878654 125878841 -14437924 + AluY SINE Alu 126 309 -2 358 239 54 116 chr10 125878874 125879150 -14437615 + L1MC5 LINE L1 7633 7891 -70 987 165 6 11 chr10 125879151 125879327 -14437438 - AluJb SINE Alu -4 308 134 1431 156 50 63 chr10 125879327 125879629 -14437136 - AluSx SINE Alu -14 298 1 1059 133 0 37 chr10 125879683 125879871 -14436894 + AluSg/x SINE Alu 121 301 -9 1795 97 6 109 chr10 125880849 125881178 -14435587 + AluSx SINE Alu 1 295 -17 850 124 28 14 chr10 125881200 125881345 -14435420 - FRAM SINE Alu -30 146 1 227 224 52 0 chr10 125881347 125881405 -14435360 + L2 LINE L2 1769 1829 -1485 1736 101 16 59 chr10 125881820 125882127 -14434638 - AluSg SINE Alu -16 294 1 294 333 43 99 chr10 125882236 125882581 -14434184 + L2 LINE L2 2925 3250 -22 2152 98 0 23 chr10 125882947 125883252 -14433513 - AluSx SINE Alu -10 302 5 198 0 0 0 chr10 125884183 125884205 -14432560 + (T)n Simple_repeat Simple_repeat 1 22 0 609 218 8 8 chr10 125885011 125885144 -14431621 + FRAM SINE Alu 1 125 -51 1964 142 0 7 chr10 125885184 125885487 -14431278 - AluJb SINE Alu -11 301 1 189 0 0 0 chr10 125885564 125885585 -14431180 + (T)n Simple_repeat Simple_repeat 1 21 0 2161 135 34 99 chr10 125885585 125886082 -14430683 - L1MB4 LINE L1 -34 6146 5682 630 170 0 0 chr10 125886082 125886182 -14430583 + MER7A DNA MER2_type 1 98 -248 2361 64 10 3 chr10 125886186 125886497 -14430268 - AluSq SINE Alu 0 313 1 596 146 19 19 chr10 125886497 125886600 -14430165 - L1MB4 LINE L1 -509 5674 5572 2240 99 0 7 chr10 125886727 125887029 -14429736 + AluSx SINE Alu 1 300 -12 1744 128 34 24 chr10 125887040 125887337 -14429428 + AluSq SINE Alu 1 300 -13 499 258 223 8 chr10 125887692 125887948 -14428817 + L2 LINE L2 3003 3313 0 2199 68 0 0 chr10 125889898 125890203 -14426562 - AluY SINE Alu 0 305 1 1546 168 108 9 chr10 125890365 125890786 -14425979 + MLT1F1 LTR MaLR 18 491 -51 1784 149 7 13 chr10 125890792 125890918 -14425847 + AluSx SINE Alu 11 136 -176 1899 100 28 17 chr10 125890918 125891208 -14425557 + AluSg SINE Alu 1 293 -17 1784 149 7 13 chr10 125891208 125891383 -14425382 + AluSx SINE Alu 136 310 -2 268 200 0 0 chr10 125891448 125891493 -14425272 + MLT1F1 LTR MaLR 515 559 -8 2590 109 58 22 chr10 125892385 125892754 -14424011 + MSTA LTR MaLR 1 355 -73 2205 97 7 0 chr10 125892754 125893052 -14423713 - AluSg SINE Alu -10 300 1 2067 135 0 0 chr10 125893052 125893349 -14423416 - AluSx SINE Alu -15 297 1 2590 109 58 22 chr10 125893349 125893391 -14423374 + MSTA LTR MaLR 354 428 0 964 124 0 0 chr10 125893454 125893591 -14423174 + AluSq/x SINE Alu 5 141 -171 1962 123 0 41 chr10 125893592 125893941 -14422824 + AluSx SINE Alu 1 312 0 462 286 40 60 chr10 125893950 125894176 -14422589 + L1M4 LINE L1 4816 5038 -1108 2014 129 3 19 chr10 125894176 125894493 -14422272 + AluJb SINE Alu 1 312 0 462 286 40 60 chr10 125894493 125894514 -14422251 + L1M4 LINE L1 5038 5058 -1088 403 172 355 0 chr10 125894515 125894608 -14422157 + FLAM_C SINE Alu 1 126 -7 2009 132 0 0 chr10 125894615 125894903 -14421862 + AluSx SINE Alu 1 288 -24 5250 123 8 12 chr10 125894903 125895563 -14421202 + L1MA3 LINE L1 5481 6139 -166 2178 106 0 28 chr10 125895563 125895883 -14420882 + AluSx SINE Alu 1 311 -1 5250 123 8 12 chr10 125895883 125896050 -14420715 + L1MA3 LINE L1 6139 6305 0 2076 136 0 0 chr10 125896108 125896417 -14420348 + AluSq SINE Alu 1 309 -4 31 0 0 0 chr10 125896449 125896480 -14420285 + AT_rich Low_complexity Low_complexity 1 31 0 841 100 17 0 chr10 125896480 125896600 -14420165 - FLAM_C SINE Alu -11 122 1 510 130 0 0 chr10 125896617 125896694 -14420071 + L1MB3 LINE L1 6072 6148 -35 653 226 0 0 chr10 125896697 125896821 -14419944 + FLAM_C SINE Alu 2 125 -8 1794 124 3 52 chr10 125896829 125897136 -14419629 - AluSx SINE Alu -20 292 1 2250 82 0 3 chr10 125897171 125897462 -14419303 - AluSp SINE Alu -15 298 9 30 27 0 0 chr10 125897473 125897510 -14419255 + AT_rich Low_complexity Low_complexity 1 37 0 1697 130 43 11 chr10 125897707 125898005 -14418760 + AluSx SINE Alu 2 308 0 2030 104 23 7 chr10 125898007 125898315 -14418450 + AluSq SINE Alu 1 313 0 226 100 0 0 chr10 125898446 125898476 -14418289 + Alu SINE Alu 60 89 -214 875 159 34 45 chr10 125898506 125898682 -14418083 + MER20 DNA MER1_type 46 219 0 509 213 255 23 chr10 125899678 125899941 -14416824 - MER5C DNA MER1_type 0 324 1 2370 87 0 0 chr10 125901057 125901368 -14415397 + AluY SINE Alu 1 311 0 650 120 0 90 chr10 125901403 125901536 -14415229 + FLAM_C SINE Alu 23 143 0 1801 142 7 7 chr10 125901741 125902067 -14414698 - AluSx SINE Alu 0 326 1 2034 118 3 7 chr10 125903496 125903801 -14412964 + AluSq SINE Alu 1 304 -9 27 29 0 0 chr10 125903921 125903955 -14412810 + AT_rich Low_complexity Low_complexity 1 34 0 1764 117 57 10 chr10 125903964 125904263 -14412502 + AluSp SINE Alu 1 313 0 195 42 0 0 chr10 125904287 125904311 -14412454 + (T)n Simple_repeat Simple_repeat 1 24 0 2199 84 7 3 chr10 125904574 125904870 -14411895 - AluY SINE Alu -14 297 1 22 35 0 0 chr10 125904971 125905000 -14411765 + AT_rich Low_complexity Low_complexity 1 29 0 329 277 92 15 chr10 125906779 125906909 -14409856 + MIR3 SINE MIR 2 141 -67 22 0 0 0 chr10 125907541 125907563 -14409202 + GC_rich Low_complexity Low_complexity 1 22 0 2262 46 42 0 chr10 125908682 125908965 -14407800 - AluY SINE Alu -16 295 1 1585 112 0 0 chr10 125909068 125909291 -14407474 + AluSg/x SINE Alu 66 288 -22 2450 49 0 10 chr10 125909606 125909911 -14406854 + AluY SINE Alu 10 311 0 269 93 37 74 chr10 125909918 125909972 -14406793 + L1MB1 LINE L1 6117 6168 0 1759 161 42 15 chr10 125909976 125910311 -14406454 + MER2 DNA MER2_type 1 344 0 1654 155 42 3 chr10 125912052 125912336 -14404429 - AluJo SINE Alu -6 306 12 435 228 55 69 chr10 125912561 125912645 -14404120 + MIR SINE MIR 6 89 -173 1395 194 96 10 chr10 125912645 125912959 -14403806 + MER58B DNA MER1_type 1 341 0 435 228 55 69 chr10 125912959 125913019 -14403746 + MIR SINE MIR 89 148 -114 2058 130 0 0 chr10 125913021 125913322 -14403443 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr10 125913393 125913424 -14403341 + AT_rich Low_complexity Low_complexity 1 31 0 2179 107 3 0 chr10 125913758 125914067 -14402698 - AluSx SINE Alu -2 310 1 1949 132 7 3 chr10 125914310 125914613 -14402152 - AluJb SINE Alu -8 304 1 839 211 67 5 chr10 125914917 125915111 -14401654 - MER3 DNA MER1_type -2 207 2 363 226 27 41 chr10 125915187 125915333 -14401432 + GA-rich Low_complexity Low_complexity 4 147 0 22 0 0 0 chr10 125915986 125916008 -14400757 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr10 125916673 125916696 -14400069 + (A)n Simple_repeat Simple_repeat 1 23 0 2182 124 3 0 chr10 125916742 125917040 -14399725 - AluSx SINE Alu -13 299 1 473 139 25 0 chr10 125917620 125917699 -14399066 - AluJo SINE Alu -6 306 226 847 136 0 131 chr10 125917699 125917875 -14398890 - AluJo SINE Alu -159 153 1 669 254 67 46 chr10 125918273 125918363 -14398402 + MIR SINE MIR 18 105 -157 2225 90 13 27 chr10 125918363 125918662 -14398103 - AluSx SINE Alu -17 295 1 669 254 67 46 chr10 125918662 125918811 -14397954 + MIR SINE MIR 105 262 0 327 147 107 0 chr10 125918925 125919000 -14397765 + MIR SINE MIR 67 149 -59 357 277 176 20 chr10 125919123 125919271 -14397494 + MER5A DNA MER1_type 9 179 -10 1960 126 0 4 chr10 125919271 125919540 -14397225 + AluSx SINE Alu 1 268 -44 203 56 56 0 chr10 125919549 125919585 -14397180 + A-rich Low_complexity Low_complexity 1 38 0 2497 49 7 10 chr10 125919719 125920024 -14396741 - AluY SINE Alu -7 304 1 283 295 62 9 chr10 125920343 125920455 -14396310 - MIR SINE MIR -98 164 47 27 29 0 0 chr10 125921132 125921166 -14395599 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 125921306 125921328 -14395437 + GC_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 125921699 125921721 -14395044 + GC_rich Low_complexity Low_complexity 1 22 0 203 299 0 35 chr10 125921877 125921964 -14394801 + G-rich Low_complexity Low_complexity 4 87 0 252 0 0 0 chr10 125921991 125922019 -14394746 + (CGG)n Simple_repeat Simple_repeat 1 28 0 224 89 0 67 chr10 125922103 125922148 -14394617 + (CAG)n Simple_repeat Simple_repeat 3 44 0 234 0 0 0 chr10 125923772 125923798 -14392967 + (T)n Simple_repeat Simple_repeat 1 26 0 1794 163 29 0 chr10 125927141 125927448 -14389317 + 7SLRNA srpRNA srpRNA 1 316 -4 2224 134 0 0 chr10 125927515 125927820 -14388945 + AluSx SINE Alu 3 307 -5 24 32 0 0 chr10 125927885 125927916 -14388849 + AT_rich Low_complexity Low_complexity 1 31 0 2330 107 3 0 chr10 125928250 125928559 -14388206 - AluSx SINE Alu -2 310 1 2095 132 7 3 chr10 125928802 125929105 -14387660 - AluJb SINE Alu -8 304 1 851 211 67 5 chr10 125929409 125929603 -14387162 - MER3 DNA MER1_type -2 207 2 363 226 27 41 chr10 125929679 125929825 -14386940 + GA-rich Low_complexity Low_complexity 4 147 0 1019 112 0 7 chr10 125930810 125930953 -14385812 + FLAM_C SINE Alu 1 142 -1 1754 116 103 31 chr10 125930954 125931246 -14385519 + AluSq SINE Alu 1 313 0 261 0 0 0 chr10 125932358 125932387 -14384378 + (TG)n Simple_repeat Simple_repeat 2 30 0 249 177 16 48 chr10 125933062 125933124 -14383641 + L2 LINE L2 3252 3311 -2 368 146 39 58 chr10 125933135 125933183 -14383582 + MER46A DNA MER2_type 1 48 -188 2126 90 31 3 chr10 125933183 125933471 -14383294 - AluSc SINE Alu -13 296 1 368 146 39 58 chr10 125933471 125933525 -14383240 + MER46A DNA MER2_type 48 101 -135 931 117 0 36 chr10 125933525 125933662 -14383103 - FRAM SINE Alu -45 131 1 892 110 29 0 chr10 125933664 125933800 -14382965 + MER46A DNA MER2_type 97 236 0 2225 94 35 0 chr10 125934836 125935122 -14381643 + AluSx SINE Alu 1 296 -16 2111 128 0 7 chr10 125935155 125935453 -14381312 + AluSx SINE Alu 1 296 -16 328 267 47 12 chr10 125935508 125935680 -14381085 - HAL1b LINE L1 -82 1266 1195 301 248 31 93 chr10 125935821 125935982 -14380783 - L1ME LINE L1 -322 5799 5649 229 269 31 0 chr10 125936388 125936467 -14380298 - MIR SINE MIR -67 141 78 459 287 87 7 chr10 125936541 125936691 -14380074 + MER91B DNA MER1_type 28 189 -1 188 300 62 50 chr10 125937078 125937158 -14379607 - MIR3 SINE MIR -19 189 109 1598 174 26 79 chr10 125937274 125937665 -14379100 - MLT1B LTR MaLR -7 383 14 342 263 21 21 chr10 125937865 125937960 -14378805 - L3 LINE CR1 -80 1497 1403 206 32 32 0 chr10 125937989 125938020 -14378745 + (TA)n Simple_repeat Simple_repeat 2 33 0 350 269 19 28 chr10 125938169 125938277 -14378488 - L3 LINE CR1 -242 1335 1229 839 169 45 19 chr10 125938302 125938477 -14378288 + FAM SINE Alu 1 47 0 2149 94 0 17 chr10 125938655 125938997 -14377768 - AluSx SINE Alu 0 337 1 2277 110 0 10 chr10 125939954 125940121 -14376644 - AluSg SINE Alu -12 298 134 2392 85 10 0 chr10 125940121 125940428 -14376337 - AluY SINE Alu -1 310 1 2277 110 0 10 chr10 125940428 125940560 -14376205 - AluSg SINE Alu -176 134 2 806 88 0 96 chr10 125940575 125940711 -14376054 - AluSg/x SINE Alu 0 309 187 190 333 39 0 chr10 125940749 125940827 -14375938 + MIR SINE MIR 36 116 -92 1989 131 10 54 chr10 125940831 125941145 -14375620 - AluSq SINE Alu -13 300 1 1881 153 14 0 chr10 125941151 125941439 -14375326 - AluSq SINE Alu -21 292 1 2042 138 0 13 chr10 125941568 125941866 -14374899 + AluSx SINE Alu 1 294 -18 625 294 70 32 chr10 125941994 125942414 -14374351 + L1ME LINE L1 5376 5824 -297 1348 146 0 50 chr10 125942414 125942653 -14374112 + AluJb SINE Alu 81 307 -5 1230 140 42 76 chr10 125942689 125942925 -14373840 + AluJo SINE Alu 76 303 -9 2002 132 30 23 chr10 125944487 125944598 -14372167 + AluJo SINE Alu 1 110 -202 2225 118 63 17 chr10 125944598 125944946 -14371819 - THE1B LTR MaLR 0 364 1 2002 132 30 23 chr10 125944946 125945137 -14371628 + AluJo SINE Alu 110 305 -7 6167 107 24 40 chr10 125945374 125945576 -14371189 + L1MA5A LINE L1 5161 5365 -932 325 114 14 43 chr10 125945576 125945646 -14371119 + L1PB1 LINE L1 6083 6150 -1 6167 107 24 40 chr10 125945646 125945707 -14371058 + L1MA5A LINE L1 5365 5425 -872 2443 100 0 3 chr10 125945707 125946016 -14370749 + AluSx SINE Alu 1 308 -4 6167 107 24 40 chr10 125946016 125946772 -14369993 + L1MA5A LINE L1 5425 6161 -136 2322 89 63 23 chr10 125946772 125947122 -14369643 + THE1B LTR MaLR 1 364 0 6167 107 24 40 chr10 125947122 125947257 -14369508 + L1MA5A LINE L1 6161 6297 0 524 254 74 52 chr10 125947455 125947898 -14368867 + MLT1K LTR MaLR 10 509 -79 659 246 66 12 chr10 125948435 125948602 -14368163 - MIR SINE MIR -79 183 8 524 241 51 15 chr10 125948651 125948788 -14367977 - MIR SINE MIR -55 207 66 269 138 0 35 chr10 125948882 125948940 -14367825 + (TTTTC)n Simple_repeat Simple_repeat 5 60 0 1222 136 12 78 chr10 125948948 125948965 -14367800 - AluSg/x SINE Alu -1 311 294 2191 102 61 0 chr10 125948965 125949258 -14367507 - AluSx SINE Alu -1 311 1 1222 136 12 78 chr10 125949258 125949483 -14367282 - AluSg/x SINE Alu -18 294 85 180 231 187 22 chr10 125950036 125950127 -14366638 + L2 LINE L2 3201 3306 -7 502 51 0 0 chr10 125950398 125950457 -14366308 + AluS SINE Alu 22 80 -232 2530 50 3 0 chr10 125950498 125950797 -14365968 - AluY SINE Alu -11 300 1 327 284 8 128 chr10 125950809 125950925 -14365840 + MER102b DNA MER1_type 103 177 -1251 1904 121 31 0 chr10 125950925 125951182 -14365583 - AluSx SINE Alu -14 298 34 327 284 8 128 chr10 125951182 125951308 -14365457 + MER102b DNA MER1_type 177 316 -25 2135 140 0 0 chr10 125951346 125951646 -14365119 - AluSx SINE Alu -12 300 1 218 325 123 32 chr10 125952586 125952740 -14364025 + L3b LINE CR1 1399 1566 -17 325 224 0 0 chr10 125953106 125953173 -14363592 - MER94 DNA DNA -67 67 1 21 36 0 0 chr10 125953392 125953420 -14363345 + AT_rich Low_complexity Low_complexity 1 28 0 2192 120 3 7 chr10 125953520 125953819 -14362946 - AluSx SINE Alu -14 298 1 6629 65 47 6 chr10 125953822 125954475 -14362290 - L1PA7 LINE L1 -7 6147 5469 2518 81 0 3 chr10 125954475 125954785 -14361980 - AluY SINE Alu -2 309 1 6629 65 47 6 chr10 125954785 125955038 -14361727 - L1PA7 LINE L1 -685 5469 5228 667 185 0 59 chr10 125955038 125955173 -14361592 - FLAM_A SINE Alu -6 127 1 225 365 56 11 chr10 125955342 125955520 -14361245 + MIR SINE MIR 5 190 -72 554 223 223 62 chr10 125956016 125956486 -14360279 - MER34C LTR ERV1 0 585 40 2314 101 15 71 chr10 125956846 125957241 -14359524 + THE1C LTR MaLR 1 373 -2 2145 126 7 0 chr10 125957241 125957527 -14359238 + AluSx SINE Alu 1 288 -24 284 318 114 0 chr10 125957713 125957845 -14358920 - MLT1K LTR MaLR -8 580 434 201 74 0 0 chr10 125957845 125957872 -14358893 + (T)n Simple_repeat Simple_repeat 1 27 0 1124 226 9 0 chr10 125958307 125958528 -14358237 - MER58A DNA MER1_type 0 224 2 1016 125 5 37 chr10 125958595 125958817 -14357948 + L1MB1 LINE L1 5224 5439 -729 1333 148 0 14 chr10 125958821 125959037 -14357728 + AluJo SINE Alu 88 300 -12 3745 149 39 46 chr10 125959042 125959280 -14357485 + L1MB1 LINE L1 5428 5666 -502 2292 98 0 7 chr10 125959280 125959575 -14357190 + AluSc SINE Alu 1 293 -16 3745 149 39 46 chr10 125959575 125960020 -14356745 + L1MB1 LINE L1 5666 6108 -60 2677 48 0 10 chr10 125960020 125960334 -14356431 + AluY SINE Alu 1 311 0 3745 149 39 46 chr10 125960334 125960395 -14356370 + L1MB1 LINE L1 6108 6168 0 1768 161 42 15 chr10 125960399 125960734 -14356031 + MER2 DNA MER2_type 1 344 0 1800 155 42 3 chr10 125962302 125962586 -14354179 - AluJo SINE Alu -6 306 12 306 275 99 58 chr10 125962607 125962778 -14353987 - L1MC4a LINE L1 -1876 5932 5755 514 201 101 101 chr10 125962811 125962895 -14353870 + MIR SINE MIR 6 89 -173 1414 194 96 10 chr10 125962895 125963209 -14353556 + MER58B DNA MER1_type 1 341 0 514 201 101 101 chr10 125963209 125963271 -14353494 + MIR SINE MIR 89 155 -107 2478 90 0 6 chr10 125963271 125963582 -14353183 + AluSq SINE Alu 1 309 -4 514 201 101 101 chr10 125963582 125963633 -14353132 + MIR SINE MIR 154 204 -58 2236 108 0 10 chr10 125963772 125964085 -14352680 - AluSx SINE Alu 0 310 1 270 271 94 0 chr10 125964220 125964305 -14352460 - L1MC4a LINE L1 -542 5579 5487 373 255 41 20 chr10 125964490 125964588 -14352177 - MIR SINE MIR -115 147 48 1293 175 175 0 chr10 125964676 125964933 -14351832 - AluJb SINE Alu 0 302 1 1017 161 135 0 chr10 125965969 125966161 -14350604 - MER20 DNA MER1_type 0 219 2 261 290 22 80 chr10 125966759 125966897 -14349868 + MIR3 SINE MIR 4 133 -75 261 86 0 0 chr10 125968132 125968175 -14348590 + (TG)n Simple_repeat Simple_repeat 1 43 0 385 304 0 8 chr10 125968449 125968574 -14348191 - MIR3 SINE MIR -7 201 78 266 288 14 0 chr10 125968710 125968783 -14347982 - L2 LINE L2 -61 3211 3138 2227 102 54 0 chr10 125969057 125969352 -14347413 + AluSx SINE Alu 1 311 -1 189 200 138 0 chr10 125970168 125970233 -14346532 - L2 LINE L2 -183 3089 3016 2153 160 17 14 chr10 125971006 125971424 -14345341 - L1MB7 LINE L1 -16 6168 5750 2091 140 3 16 chr10 125971727 125972034 -14344731 + AluSx SINE Alu 1 303 -9 2481 206 84 37 chr10 125972228 125972846 -14343919 - L1ME1 LINE L1 -1 6165 5519 575 221 18 61 chr10 125972942 125973105 -14343660 - LTR16C LTR ERVL 0 491 336 264 273 112 28 chr10 125973123 125973266 -14343499 - LTR16C LTR ERVL -271 220 66 2629 58 0 0 chr10 125973340 125973648 -14343117 - AluY SINE Alu -3 308 1 1083 147 54 29 chr10 125973938 125974142 -14342623 + MER3 DNA MER1_type 1 209 0 450 193 0 0 chr10 125974157 125974240 -14342525 - L1MB7 LINE L1 -509 5733 5651 2411 71 3 7 chr10 125974288 125974584 -14342181 - AluY SINE Alu -16 295 1 23 0 0 0 chr10 125974657 125974680 -14342085 + AT_rich Low_complexity Low_complexity 1 23 0 7756 44 12 10 chr10 125974696 125976229 -14340536 - SVA Other Other -799 1379 1 2422 87 3 16 chr10 125976616 125976926 -14339839 - AluSg SINE Alu -4 306 1 439 273 15 36 chr10 125977029 125977186 -14339579 + MIR3 SINE MIR 25 176 -51 397 149 71 101 chr10 125977236 125977300 -14339465 - MER103 DNA DNA -1 165 101 2370 93 3 0 chr10 125977300 125977591 -14339174 - AluSx SINE Alu -20 292 1 397 149 71 101 chr10 125977591 125977694 -14339071 - MER103 DNA DNA -65 101 3 253 194 9 83 chr10 125978007 125978115 -14338650 + L1MC5 LINE L1 7818 7917 -44 184 206 0 0 chr10 125978330 125978364 -14338401 - MIR SINE MIR -110 152 119 645 246 38 0 chr10 125979649 125979832 -14336933 + MER33 DNA MER1_type 20 209 -115 467 167 250 0 chr10 125979832 125979940 -14336825 + AluJo SINE Alu 1 135 -177 603 185 6 62 chr10 125979940 125980118 -14336647 + MER33 DNA MER1_type 196 363 0 307 283 60 54 chr10 125980142 125980326 -14336439 + MIR SINE MIR 43 227 -35 180 206 191 0 chr10 125980352 125980415 -14336350 - L2 LINE L2 -6 3266 3192 232 259 69 0 chr10 125980458 125980516 -14336249 + MIR SINE MIR 43 104 -104 2293 111 0 0 chr10 125983196 125983493 -14333272 + AluSg SINE Alu 5 301 -9 225 94 0 0 chr10 125983493 125983525 -14333240 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 687 194 0 0 chr10 125983558 125983687 -14333078 + L1M3 LINE L1 5570 5698 -482 1372 189 11 97 chr10 125984901 125985090 -14331675 + MLT1B LTR MaLR 1 142 -248 2222 101 0 14 chr10 125985090 125985387 -14331378 + AluSg SINE Alu 1 293 -17 1372 189 11 97 chr10 125985387 125985579 -14331186 + MLT1B LTR MaLR 142 349 -41 1507 236 113 59 chr10 125986132 125986707 -14330058 + L1ME1 LINE L1 5556 6161 -5 4470 39 30 0 chr10 125987588 125988153 -14328612 + L1PA3 LINE L1 5574 6155 0 306 0 0 0 chr10 125988622 125988656 -14328109 + (TG)n Simple_repeat Simple_repeat 1 34 0 225 0 0 0 chr10 125988657 125988682 -14328083 + (GA)n Simple_repeat Simple_repeat 1 25 0 243 259 95 17 chr10 125989155 125989271 -14327494 - MIR SINE MIR -29 233 109 1758 114 9 0 chr10 125990260 125990487 -14326278 + AluSg/x SINE Alu 65 293 -19 187 214 0 0 chr10 125991290 125991332 -14325433 - L3 LINE CR1 -81 1496 1455 451 242 49 115 chr10 125991562 125991664 -14325101 - MIR SINE MIR -29 233 126 2390 109 3 0 chr10 125991664 125991975 -14324790 - AluSx SINE Alu 0 312 1 451 242 49 115 chr10 125991975 125992116 -14324649 - MIR SINE MIR -136 126 6 477 256 85 35 chr10 125992342 125992541 -14324224 - MIR SINE MIR -38 224 16 1916 166 9 6 chr10 125993672 125994015 -14322750 + MER2 DNA MER2_type 1 344 0 192 404 53 10 chr10 125994037 125994245 -14322520 - L2 LINE L2 -113 3159 2943 2448 98 0 7 chr10 125994414 125994721 -14322044 - AluSx SINE Alu -7 305 1 369 270 80 29 chr10 125995640 125995777 -14320988 - MIR SINE MIR -107 155 12 1937 133 3 48 chr10 125996888 125997014 -14319751 + AluJo SINE Alu 1 131 -181 2405 78 3 0 chr10 125997014 125997308 -14319457 - AluSp SINE Alu -18 295 1 1937 133 3 48 chr10 125997308 125997496 -14319269 + AluJo SINE Alu 131 301 -11 2130 87 7 30 chr10 125997792 125998092 -14318673 - AluSx SINE Alu -15 297 5 1255 209 125 26 chr10 125998616 125998927 -14317838 - MLT1A2 LTR MaLR -32 342 1 359 320 49 30 chr10 125998934 125999137 -14317628 + MIR SINE MIR 49 255 -7 488 269 58 103 chr10 125999618 126000035 -14316730 + MLT1K LTR MaLR 188 585 -3 2281 94 0 16 chr10 126000300 126000628 -14316137 - AluY SINE Alu 0 311 1 189 107 0 0 chr10 126000649 126000677 -14316088 + (GGAGA)n Simple_repeat Simple_repeat 4 31 0 401 148 71 107 chr10 126000859 126000963 -14315802 + MER103 DNA DNA 3 100 -66 2370 93 3 0 chr10 126000963 126001254 -14315511 + AluSx SINE Alu 1 292 -20 401 148 71 107 chr10 126001254 126001318 -14315447 + MER103 DNA DNA 100 165 -1 463 278 7 36 chr10 126001368 126001526 -14315239 - MIR3 SINE MIR -51 157 25 2430 87 3 16 chr10 126001629 126001940 -14314825 + AluSg SINE Alu 1 307 -3 288 0 0 0 chr10 126002324 126002356 -14314409 + (TCTCCC)n Simple_repeat Simple_repeat 1 32 0 7756 48 12 7 chr10 126002361 126003858 -14312907 + SVA Other Other 32 1379 -7 23 0 0 0 chr10 126003874 126003897 -14312868 + AT_rich Low_complexity Low_complexity 1 23 0 2411 71 3 7 chr10 126003970 126004266 -14312499 + AluY SINE Alu 1 295 -16 450 193 0 0 chr10 126004314 126004397 -14312368 + L1MC/D LINE L1 5651 5733 -509 1083 147 54 29 chr10 126004412 126004616 -14312149 - MER3 DNA MER1_type 0 209 1 2542 74 0 0 chr10 126004906 126005216 -14311549 + AluY SINE Alu 1 310 -1 1772 167 3 10 chr10 126005894 126006059 -14310706 - AluJb SINE Alu -4 298 134 2346 96 0 22 chr10 126006059 126006232 -14310533 - AluSx SINE Alu -7 305 141 2045 89 55 20 chr10 126006232 126006525 -14310240 - AluSp SINE Alu -10 303 1 2346 96 0 22 chr10 126006525 126006663 -14310102 - AluSx SINE Alu -171 141 1 1772 167 3 10 chr10 126006663 126006797 -14309968 - AluJb SINE Alu -168 134 1 784 115 16 16 chr10 126006815 126006937 -14309828 - FLAM_C SINE Alu -10 123 2 22 0 0 0 chr10 126006941 126006963 -14309802 + AT_rich Low_complexity Low_complexity 1 22 0 2362 122 0 0 chr10 126007188 126007499 -14309266 + AluSx SINE Alu 2 312 0 805 188 97 29 chr10 126007869 126008076 -14308689 - MER58A DNA MER1_type 0 224 4 883 153 0 0 chr10 126008206 126008337 -14308428 - FLAM_C SINE Alu -12 131 1 532 182 68 68 chr10 126008526 126008658 -14308107 - AluJb SINE Alu -179 133 2 2421 85 0 16 chr10 126008668 126008975 -14307790 - AluSc SINE Alu -7 302 1 233 318 100 0 chr10 126009398 126009549 -14307216 - MIR SINE MIR -56 152 1 437 311 25 0 chr10 126009919 126010038 -14306727 + L2 LINE L2 3189 3310 -3 180 0 0 0 chr10 126010772 126010792 -14305973 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 243 264 28 0 chr10 126011132 126011204 -14305561 - MIR SINE MIR -74 134 61 2320 123 0 0 chr10 126011654 126011963 -14304802 + AluSx SINE Alu 1 309 -3 183 289 60 36 chr10 126011997 126012080 -14304685 + L2 LINE L2 2562 2646 -668 283 320 69 63 chr10 126012233 126012552 -14304213 + L2 LINE L2 2950 3270 -2 1242 95 0 0 chr10 126013100 126013279 -14303486 + (TCC)n Simple_repeat Simple_repeat 2 180 0 296 239 0 8 chr10 126013280 126013397 -14303368 + CT-rich Low_complexity Low_complexity 2 117 0 304 323 7 19 chr10 126013417 126013572 -14303193 + CT-rich Low_complexity Low_complexity 4 156 0 827 144 7 0 chr10 126013704 126013857 -14302908 + CT-rich Low_complexity Low_complexity 3 156 0 1778 179 59 0 chr10 126014105 126014429 -14302336 + MER2 DNA MER2_type 2 344 0 258 346 69 31 chr10 126014489 126014648 -14302117 - MIR SINE MIR -29 233 69 584 138 0 0 chr10 126014736 126014823 -14301942 + AluS SINE Alu 2 88 -224 689 206 144 41 chr10 126016195 126016389 -14300376 + MER58A DNA MER1_type 1 214 -10 2560 72 0 0 chr10 126016406 126016711 -14300054 + AluY SINE Alu 1 305 -6 3519 134 54 5 chr10 126016814 126017439 -14299326 + L1PB1 LINE L1 5491 6146 -5 25 0 0 0 chr10 126017439 126017464 -14299301 + AT_rich Low_complexity Low_complexity 1 25 0 947 291 125 11 chr10 126017473 126017834 -14298931 - MLT1L LTR MaLR -8 607 206 295 239 15 15 chr10 126017818 126017885 -14298880 - LTR67 LTR ERVL -394 163 97 * 291 310 33 49 chr10 126018230 126018414 -14298351 - MIR SINE MIR -80 182 2 357 305 75 19 chr10 126018923 126018970 -14297795 + L2 LINE L2 1848 1891 -1423 1981 217 13 20 chr10 126018970 126019366 -14297399 + MSTD LTR MaLR 1 393 -3 357 305 75 19 chr10 126019366 126019531 -14297234 + L2 LINE L2 1891 2072 -1242 384 224 61 20 chr10 126019596 126019694 -14297071 - MIR SINE MIR -10 252 151 282 284 165 0 chr10 126019703 126019812 -14296953 - L2 LINE L2 0 3272 3146 262 257 72 76 chr10 126020191 126020428 -14296337 + L2 LINE L2 2834 3069 -203 2062 91 38 3 chr10 126020658 126020945 -14295820 + AluSx SINE Alu 1 297 -15 261 0 0 0 chr10 126021292 126021321 -14295444 + (TG)n Simple_repeat Simple_repeat 2 30 0 1471 45 11 0 chr10 126021321 126021498 -14295267 - L1PA5 LINE L1 -11 6143 5965 1903 113 10 45 chr10 126022308 126022618 -14294147 + AluSx SINE Alu 1 299 -13 756 280 91 22 chr10 126022618 126022936 -14293829 - L1ME3A LINE L1 -40 6130 5791 347 364 75 0 chr10 126023270 126023443 -14293322 - MER117 DNA MER1_type -3 194 9 201 359 0 26 chr10 126024463 126024580 -14292185 - MIR3 SINE MIR -29 179 66 403 315 123 10 chr10 126025066 126025358 -14291407 - L2 LINE L2 -529 2785 2461 1234 85 11 11 chr10 126025782 126025959 -14290806 - AluSg/x SINE Alu -5 307 131 360 260 96 24 chr10 126026010 126026153 -14290612 - MIR SINE MIR -60 148 32 207 277 0 23 chr10 126026383 126026513 -14290252 + CT-rich Low_complexity Low_complexity 1 127 0 331 219 146 10 chr10 126026870 126026966 -14289799 - L2 LINE L2 0 3272 3164 268 242 40 40 chr10 126027179 126027278 -14289487 + L1ME LINE L1 5681 5779 -383 227 264 0 0 chr10 126027366 126027419 -14289346 - L2 LINE L2 -340 2973 2921 320 256 51 17 chr10 126028426 126028543 -14288222 + MIR3 SINE MIR 81 201 -7 618 258 169 0 chr10 126028597 126028775 -14287990 - MIR SINE MIR -42 220 13 1623 190 129 39 chr10 126028784 126029242 -14287523 + MLT1D LTR MaLR 7 505 0 507 290 41 6 chr10 126030634 126030803 -14285962 + L2 LINE L2 3010 3184 -88 187 322 17 0 chr10 126030938 126030997 -14285768 + L3 LINE CR1 1517 1576 -1 426 241 90 15 chr10 126031061 126031194 -14285571 - MIR SINE MIR -70 192 50 322 237 78 63 chr10 126031313 126031441 -14285324 + MIR SINE MIR 8 144 -64 269 345 129 14 chr10 126032233 126032442 -14284323 - MIR SINE MIR -10 252 20 447 302 32 0 chr10 126032699 126032825 -14283940 - L2 LINE L2 0 3313 3184 1934 135 10 10 chr10 126033002 126033299 -14283466 + AluSx SINE Alu 1 297 -15 371 203 0 0 chr10 126033339 126033408 -14283357 + L1MB5 LINE L1 6051 6119 -55 190 274 20 0 chr10 126034802 126034853 -14281912 - MIR3 SINE MIR -50 158 107 1079 305 67 65 chr10 126036120 126036812 -14279953 - MER21B LTR ERV1 -165 698 6 246 238 100 12 chr10 126036935 126037015 -14279750 - MER54A LTR ERVL -438 463 377 333 0 0 0 chr10 126037058 126037095 -14279670 + (TG)n Simple_repeat Simple_repeat 1 37 0 1061 144 50 0 chr10 126037602 126037782 -14278983 - MER5A DNA MER1_type 0 189 1 379 324 51 6 chr10 126037889 126038065 -14278700 + MIR SINE MIR 20 203 -59 194 255 20 0 chr10 126039474 126039525 -14277240 + MIR SINE MIR 100 151 -111 235 343 105 23 chr10 126039921 126040093 -14276672 - L2 LINE L2 -3 3310 3125 290 344 46 8 chr10 126040286 126040417 -14276348 - L2 LINE L2 -259 3054 2919 1850 187 126 32 chr10 126040988 126041449 -14275316 - MLT1D LTR MaLR -1 504 1 1494 118 137 24 chr10 126041700 126041955 -14274810 - AluJo SINE Alu -20 292 9 950 199 31 11 chr10 126041970 126042161 -14274604 - MER20 DNA MER1_type -24 195 1 280 229 31 62 chr10 126042176 126042272 -14274493 + L2 LINE L2 3180 3272 0 300 293 121 32 chr10 126042333 126042457 -14274308 + MER5A DNA MER1_type 16 158 -31 3318 170 20 3 chr10 126042457 126043046 -14273719 + L1MB3 LINE L1 5584 6182 -1 300 293 121 32 chr10 126043046 126043078 -14273687 + MER5A DNA MER1_type 158 186 -3 420 264 141 74 chr10 126043251 126043412 -14273353 - MER102b DNA MER1_type -1132 296 108 1395 120 23 0 chr10 126043412 126043629 -14273136 - L1PB1 LINE L1 0 6151 5930 420 264 141 74 chr10 126043629 126043736 -14273029 - MER102b DNA MER1_type -1320 108 10 380 303 32 105 chr10 126043888 126044055 -14272710 + MIR SINE MIR 9 163 -63 2240 96 0 10 chr10 126044055 126044358 -14272407 + AluSx SINE Alu 1 300 -12 195 231 0 39 chr10 126044531 126044583 -14272182 + MIR SINE MIR 159 208 -54 472 200 7 89 chr10 126046559 126046694 -14270071 - MIR SINE MIR -79 183 60 210 174 43 0 chr10 126046792 126046838 -14269927 + (GGGTG)n Simple_repeat Simple_repeat 3 50 0 339 277 111 25 chr10 126047614 126047808 -14268957 + MIR SINE MIR 6 214 -48 183 311 0 0 chr10 126048573 126048618 -14268147 + L2 LINE L2 3024 3068 -245 227 277 15 0 chr10 126048712 126048777 -14267988 + L2 LINE L2 3205 3270 -2 1175 215 46 8 chr10 126048971 126049232 -14267533 + L1MDa LINE L1 18 288 -6252 720 77 11 0 chr10 126049237 126049328 -14267437 + AluSp SINE Alu 79 170 -143 237 277 264 13 chr10 126049471 126049626 -14267139 + MIR SINE MIR 58 251 -11 1011 174 0 3 chr10 126049634 126050103 -14266662 + (CCA)n Simple_repeat Simple_repeat 1 647 0 449 215 91 0 chr10 126050327 126050448 -14266317 + L2 LINE L2 2808 2939 -375 530 218 10 0 chr10 126050480 126050581 -14266184 - MER58A DNA MER1_type 0 110 9 189 319 14 78 chr10 126050600 126050741 -14266024 + L2 LINE L2 2938 3069 -244 941 48 0 40 chr10 126050800 126050926 -14265839 + AluY SINE Alu 1 121 -190 1013 174 35 132 chr10 126051026 126051336 -14265429 - MLT1A1 LTR MaLR -83 282 3 1589 119 0 0 chr10 126051510 126051728 -14265037 + AluSq SINE Alu 5 222 -91 444 284 23 57 chr10 126052491 126052667 -14264098 + L2 LINE L2 2632 2801 -513 1777 197 51 28 chr10 126052680 126052869 -14263896 - Charlie4a DNA MER1_type -1499 462 279 2013 144 0 0 chr10 126052869 126053174 -14263591 - AluJb SINE Alu -7 305 1 1777 197 51 28 chr10 126053174 126053415 -14263350 - Charlie4a DNA MER1_type -1682 279 22 654 290 173 27 chr10 126053445 126053890 -14262875 + L2 LINE L2 2804 3313 0 769 229 12 18 chr10 126054927 126055093 -14261672 + FRAM SINE Alu 1 165 -1 515 180 9 0 chr10 126055897 126056008 -14260757 + CT-rich Low_complexity Low_complexity 2 113 0 458 270 126 0 chr10 126056012 126056123 -14260642 - FLAM_A SINE Alu -8 125 1 2157 108 3 0 chr10 126056135 126056430 -14260335 - AluSx SINE Alu -16 296 1 215 302 0 0 chr10 126056460 126056513 -14260252 - L2 LINE L2 -12 3301 3249 298 362 35 0 chr10 126056592 126056708 -14260057 + MIR SINE MIR 63 182 -80 227 195 0 0 chr10 126056732 126056773 -14259992 + (CAT)n Simple_repeat Simple_repeat 1 41 0 252 250 59 0 chr10 126057981 126058049 -14258716 - MIR3 SINE MIR -49 159 88 2415 176 21 42 chr10 126058088 126058386 -14258379 - MLT1C LTR MaLR 0 467 181 2182 99 3 10 chr10 126058386 126058689 -14258076 - AluSq SINE Alu -12 301 1 2415 176 21 42 chr10 126058689 126058867 -14257898 - MLT1C LTR MaLR -286 181 1 274 285 78 10 chr10 126059126 126059323 -14257442 - L1ME4a LINE L1 -46 6075 5819 320 187 66 44 chr10 126059641 126059732 -14257033 - L1ME4a LINE L1 -367 5754 5662 1678 166 3 10 chr10 126060383 126060685 -14256080 + AluJb SINE Alu 1 300 -12 1876 138 13 10 chr10 126060877 126061197 -14255568 - AluSx SINE Alu 0 312 1 296 230 189 0 chr10 126061457 126061575 -14255190 + MIR SINE MIR 30 166 -62 542 316 133 32 chr10 126061838 126062514 -14254251 + L2 LINE L2 2494 3260 -12 547 330 115 0 chr10 126063086 126063295 -14253470 + MIR SINE MIR 11 243 -19 198 0 0 0 chr10 126064034 126064056 -14252709 + (GA)n Simple_repeat Simple_repeat 1 22 0 636 282 44 31 chr10 126064096 126064323 -14252442 - MIR SINE MIR -10 252 23 198 103 0 0 chr10 126064830 126064859 -14251906 + (T)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 126064878 126064899 -14251866 + AT_rich Low_complexity Low_complexity 1 21 0 182 105 26 0 chr10 126064913 126064951 -14251814 + T-rich Low_complexity Low_complexity 5 43 0 2275 51 0 0 chr10 126064952 126065225 -14251540 - L1PA5 LINE L1 -3 6151 5879 626 47 24 0 chr10 126065642 126065727 -14251038 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 2387 69 0 0 chr10 126065733 126066037 -14250728 - AluY SINE Alu -7 304 1 182 371 22 0 chr10 126066872 126066961 -14249804 + L2 LINE L2 3180 3270 -2 329 264 0 7 chr10 126067985 126068129 -14248636 + (TG)n Simple_repeat Simple_repeat 2 144 0 252 288 0 0 chr10 126068148 126068266 -14248499 + (TG)n Simple_repeat Simple_repeat 1 118 0 271 258 65 11 chr10 126068814 126068907 -14247858 + L2 LINE L2 3173 3270 -2 283 321 62 6 chr10 126070139 126070298 -14246467 + MIR SINE MIR 8 172 -70 221 295 107 33 chr10 126071708 126071830 -14244935 - L2 LINE L2 -3 3310 3180 2284 121 30 33 chr10 126072054 126072419 -14244346 + THE1B LTR MaLR 1 364 0 518 315 24 38 chr10 126072514 126072727 -14244038 - MIR SINE MIR -48 214 5 357 295 100 78 chr10 126072916 126073187 -14243578 - MLT1J LTR MaLR -77 434 158 228 67 0 0 chr10 126074692 126074722 -14242043 + (T)n Simple_repeat Simple_repeat 1 30 0 390 188 263 0 chr10 126074722 126074882 -14241883 + MER46C DNA MER2_type 116 317 -21 1077 159 61 72 chr10 126074890 126075167 -14241598 - L1MA9 LINE L1 -34 6278 6005 2041 120 0 0 chr10 126075167 126075450 -14241315 - AluJb SINE Alu -7 305 23 263 77 0 0 chr10 126075463 126075502 -14241263 - L1MA9 LINE L1 -353 5827 5789 1133 208 9 17 chr10 126075502 126075733 -14241032 - MER8 DNA MER2_type 0 239 11 * 1946 148 18 9 chr10 126075687 126076017 -14240748 + MER2 DNA MER2_type 11 343 -2 775 163 5 95 chr10 126076019 126076209 -14240556 - L1MA9 LINE L1 -527 5785 5613 496 215 0 74 chr10 126076209 126076269 -14240496 + Charlie1 DNA MER1_type 2637 2700 -61 1966 121 0 14 chr10 126076269 126076551 -14240214 + AluSg SINE Alu 1 278 -32 225 0 0 0 chr10 126076551 126076576 -14240189 + (CAA)n Simple_repeat Simple_repeat 3 27 0 496 215 0 74 chr10 126076576 126076649 -14240116 + Charlie1 DNA MER1_type 2698 2761 0 221 271 129 12 chr10 126079387 126079472 -14237293 - MIR SINE MIR -117 145 51 1626 210 74 8 chr10 126079494 126079860 -14236905 - MLT1B LTR MaLR 0 390 1 186 189 0 0 chr10 126079971 126080008 -14236757 - L2 LINE L2 -208 3064 3028 410 213 3 74 chr10 126080697 126080942 -14235823 + GA-rich Low_complexity Low_complexity 1 227 0 296 252 17 78 chr10 126081811 126081926 -14234839 + MIR SINE MIR 22 129 -133 303 267 38 38 chr10 126082175 126082280 -14234485 - L2 LINE L2 0 3272 3168 2393 96 0 0 chr10 126082449 126082761 -14234004 + AluSx SINE Alu 1 312 0 2256 92 7 3 chr10 126083769 126084073 -14232692 + AluSq SINE Alu 1 305 -8 203 306 272 20 chr10 126084073 126084220 -14232545 - MIR SINE MIR -9 253 70 1146 268 108 35 chr10 126084237 126084699 -14232066 - MLT1J LTR MaLR -15 496 1 252 333 10 10 chr10 126084830 126084932 -14231833 + L2 LINE L2 3170 3271 -1 218 299 10 52 chr10 126086418 126086515 -14230250 + MIR3 SINE MIR 93 185 -23 249 270 40 40 chr10 126086713 126086813 -14229952 - L2 LINE L2 0 3313 3214 692 250 59 14 chr10 126087645 126087864 -14228901 + MIR SINE MIR 39 262 0 243 378 44 0 chr10 126088391 126088571 -14228194 + L3 LINE CR1 1317 1504 -73 349 338 47 0 chr10 126089292 126089440 -14227325 - MIR3 SINE MIR -24 184 30 309 214 48 24 chr10 126089785 126089864 -14226901 - L2 LINE L2 0 3272 3192 338 214 139 28 chr10 126089864 126089983 -14226782 - MER5B DNA MER1_type -3 186 46 180 0 0 0 chr10 126092393 126092413 -14224352 + (CCCTG)n Simple_repeat Simple_repeat 2 21 0 188 129 0 0 chr10 126092690 126092721 -14224044 - MIR SINE MIR -97 111 81 818 191 51 17 chr10 126092725 126092903 -14223862 - MER20 DNA MER1_type 0 219 36 1208 269 59 20 chr10 126093267 126093696 -14223069 - MLT1K LTR MaLR -2 586 67 191 188 412 0 chr10 126093718 126093803 -14222962 + MER5C DNA MER1_type 2 121 -203 412 141 103 0 chr10 126093911 126093989 -14222776 + MER5C DNA MER1_type 239 324 0 430 171 8 138 chr10 126093996 126094061 -14222704 - MER5A DNA MER1_type -36 153 110 2649 80 40 6 chr10 126094061 126094413 -14222352 + THE1B LTR MaLR 1 364 0 430 171 8 138 chr10 126094413 126094470 -14222295 - MER5A DNA MER1_type -79 110 47 913 148 16 44 chr10 126094470 126094653 -14222112 - Tigger1 DNA MER2_type -2240 178 1 421 174 36 123 chr10 126094653 126094789 -14221976 + MER58B DNA MER1_type 215 338 -3 646 203 8 0 chr10 126094961 126095084 -14221681 - MIR3 SINE MIR -26 182 59 1948 134 192 0 chr10 126095447 126095806 -14220959 + MSTA LTR MaLR 1 428 0 2362 82 0 7 chr10 126097335 126097640 -14219125 - AluSq SINE Alu -10 303 1 236 183 0 17 chr10 126097748 126097808 -14218957 + (TG)n Simple_repeat Simple_repeat 2 60 0 252 223 27 177 chr10 126099446 126099666 -14217099 - MLT1K LTR MaLR -216 372 186 473 278 5 82 chr10 126099671 126099865 -14216900 - MLT1K LTR MaLR -341 247 69 710 307 20 5 chr10 126099916 126100144 -14216621 - MIR SINE MIR -24 238 9 332 253 13 0 chr10 126100585 126100664 -14216101 - MIR SINE MIR -59 149 70 574 343 50 43 chr10 126100866 126101286 -14215479 - MLT1K LTR MaLR 0 588 166 189 323 32 0 chr10 126101877 126101939 -14214826 + MIR SINE MIR 83 146 -62 439 200 121 50 chr10 126102069 126102209 -14214556 + L2 LINE L2 3159 3308 -5 246 310 66 49 chr10 126102672 126102898 -14213867 + L2 LINE L2 2271 2500 -814 524 237 16 10 chr10 126103052 126103178 -14213587 + MER5B DNA MER1_type 1 144 -45 2460 246 123 56 chr10 126103179 126103679 -14213086 - L1MC5 LINE L1 -36 7925 7460 2404 75 0 0 chr10 126103679 126103984 -14212781 - AluY SINE Alu -6 305 1 2460 246 123 56 chr10 126103984 126104679 -14212086 - L1MC5 LINE L1 -501 7460 6650 232 173 58 0 chr10 126104684 126104736 -14212029 - MER5B DNA MER1_type -117 61 7 432 291 81 31 chr10 126105118 126105341 -14211424 + MIR SINE MIR 15 248 -14 440 258 16 8 chr10 126105466 126105590 -14211175 - MIR3 SINE MIR -81 127 3 515 239 175 22 chr10 126105593 126106012 -14210753 - L2 LINE L2 -128 3185 2709 837 194 0 0 chr10 126106016 126106189 -14210576 - FRAM SINE Alu 0 176 4 1460 256 92 51 chr10 126106194 126106644 -14210121 - L2 LINE L2 -600 2714 2231 1939 148 13 0 chr10 126106644 126106948 -14209817 - AluJb SINE Alu -4 308 1 1460 256 92 51 chr10 126106948 126107103 -14209662 - L2 LINE L2 -1083 2231 2084 2124 120 3 0 chr10 126107768 126108067 -14208698 - AluSx SINE Alu -12 300 1 482 290 14 7 chr10 126108571 126108716 -14208049 - L2 LINE L2 -4 3309 3164 1534 173 7 42 chr10 126108718 126109025 -14207740 - AluJo SINE Alu -16 296 1 1969 142 0 0 chr10 126109096 126109391 -14207374 - AluSx SINE Alu -8 304 10 2168 209 73 10 chr10 126109410 126109892 -14206873 - MLT1F LTR MaLR -30 512 1 341 22 22 0 chr10 126110564 126110610 -14206155 + (CA)n Simple_repeat Simple_repeat 2 48 0 2290 123 27 51 chr10 126110962 126111168 -14205597 - THE1B LTR MaLR 0 364 169 2153 99 0 35 chr10 126111168 126111480 -14205285 + AluSx SINE Alu 1 301 -11 2290 123 27 51 chr10 126111480 126111646 -14205119 - THE1B LTR MaLR -195 169 1 383 226 113 0 chr10 126112162 126112286 -14204479 - LTR33 LTR ERVL -1 520 383 187 224 35 82 chr10 126112685 126112770 -14203995 - L2 LINE L2 -210 3062 2982 1983 85 0 4 chr10 126113206 126113466 -14203299 - AluSq SINE Alu -54 259 1 299 261 152 0 chr10 126114475 126114567 -14202198 + MIR SINE MIR 64 169 -93 464 183 7 0 chr10 126114624 126114761 -14202004 + (TG)n Simple_repeat Simple_repeat 2 139 0 300 194 30 0 chr10 126114946 126115013 -14201752 + MIR3 SINE MIR 88 156 -52 274 297 20 0 chr10 126115662 126115763 -14201002 + MIR3 SINE MIR 52 154 -54 200 348 209 6 chr10 126115928 126116086 -14200679 - MIR SINE MIR 0 262 73 227 252 15 96 chr10 126116184 126116319 -14200446 + MER5B DNA MER1_type 53 176 -2 * 306 255 37 61 chr10 126116217 126116333 -14200432 - MER5B DNA MER1_type -73 105 3 244 275 11 55 chr10 126116397 126116488 -14200277 + MIR3 SINE MIR 119 205 -3 201 200 20 0 chr10 126117267 126117317 -14199448 + MIR SINE MIR 91 141 -67 447 279 172 20 chr10 126118438 126118642 -14198123 - MIR SINE MIR 0 262 28 608 182 47 14 chr10 126119434 126119582 -14197183 - MER103 DNA DNA -7 159 7 788 231 16 16 chr10 126120226 126120412 -14196353 + MER20 DNA MER1_type 34 219 0 182 269 90 15 chr10 126120862 126120929 -14195836 + L2 LINE L2 3200 3271 -1 513 281 132 31 chr10 126121304 126121532 -14195233 + MIR SINE MIR 8 258 -4 487 289 45 52 chr10 126121682 126121973 -14194792 - MLT1I LTR MaLR -5 404 116 2187 113 0 3 chr10 126122412 126122722 -14194043 + AluSx SINE Alu 1 309 -3 228 172 62 0 chr10 126122737 126122801 -14193964 - L1MB7 LINE L1 -13 6171 6104 3739 177 38 32 chr10 126122917 126123148 -14193617 - L1MB7 LINE L1 -63 6121 5893 2428 42 3 0 chr10 126123148 126123436 -14193329 - AluY SINE Alu -17 294 6 3739 177 38 32 chr10 126123436 126123593 -14193172 - L1MB7 LINE L1 -291 5893 5738 1930 151 0 3 chr10 126123593 126123911 -14192854 - AluSq SINE Alu 0 313 1 3739 177 38 32 chr10 126123911 126124527 -14192238 - L1MB7 LINE L1 -446 5738 5106 255 356 75 0 chr10 126124773 126124919 -14191846 - MIR SINE MIR -18 244 88 250 214 247 34 chr10 126125654 126125743 -14191022 + MIR SINE MIR 57 164 -98 1152 254 83 16 chr10 126125756 126126189 -14190576 + MER113 DNA MER1_type? 17 478 -43 253 240 0 0 chr10 126127203 126127253 -14189512 - MIR3 SINE MIR -50 158 109 236 302 151 0 chr10 126127554 126127660 -14189105 - MIR SINE MIR -6 256 135 2618 181 21 21 chr10 126127697 126127718 -14189047 + L1MB4 LINE L1 5651 5671 -509 1855 153 0 43 chr10 126127718 126127858 -14188907 + AluJo SINE Alu 1 145 -167 2282 102 3 0 chr10 126127858 126128163 -14188602 + AluSp SINE Alu 1 306 -7 1855 153 0 43 chr10 126128163 126128348 -14188417 + AluJo SINE Alu 145 312 0 2618 181 21 21 chr10 126128348 126128856 -14187909 + L1MB4 LINE L1 5670 6180 0 389 161 131 58 chr10 126131482 126131619 -14185146 - MER69 DNA AcHobo 0 2526 2380 2303 106 0 0 chr10 126131816 126132127 -14184638 - AluSx SINE Alu -1 311 1 193 216 0 0 chr10 126132956 126132993 -14183772 - MIR3 SINE MIR -46 162 126 245 156 44 0 chr10 126133402 126133447 -14183318 - L2 LINE L2 -3 3310 3264 221 333 13 13 chr10 126133461 126133539 -14183226 + MIR SINE MIR 2 79 -183 293 336 16 16 chr10 126133645 126133767 -14182998 + MIR SINE MIR 109 230 -32 631 257 93 55 chr10 126134529 126134766 -14181999 + MIR SINE MIR 3 248 -14 2299 112 0 0 chr10 126134776 126135088 -14181677 + AluSx SINE Alu 1 312 0 221 328 108 42 chr10 126135178 126135596 -14181169 - L2 LINE L2 -222 3050 2553 245 322 113 0 chr10 126135777 126135892 -14180873 + MIR3 SINE MIR 52 179 -29 2217 108 0 10 chr10 126136556 126136870 -14179895 - AluSx SINE Alu -1 311 1 788 259 54 0 chr10 126140030 126140235 -14176530 + MIR SINE MIR 47 262 0 205 191 0 0 chr10 126140313 126140355 -14176410 + A-rich Low_complexity Low_complexity 1 42 0 1880 156 6 13 chr10 126140543 126140857 -14175908 - AluJo SINE Alu 0 312 1 204 365 10 10 chr10 126141335 126141431 -14175334 - MIR3 SINE MIR -9 199 104 307 261 153 44 chr10 126142331 126142554 -14174211 - MIR SINE MIR -11 251 6 480 279 14 48 chr10 126142765 126142912 -14173853 - MIR SINE MIR -75 187 46 255 103 0 0 chr10 126143767 126143806 -14172959 + (CA)n Simple_repeat Simple_repeat 2 40 0 451 254 27 18 chr10 126143877 126143987 -14172778 - L2 LINE L2 -2 3270 3160 205 329 0 27 chr10 126144048 126144121 -14172644 - L2 LINE L2 -42 3230 3160 204 329 27 0 chr10 126144381 126144454 -14172311 + L2 LINE L2 3197 3271 -1 289 317 12 0 chr10 126144721 126144803 -14171962 + L2 LINE L2 3231 3313 0 378 42 0 0 chr10 126145234 126145282 -14171483 + (CA)n Simple_repeat Simple_repeat 1 48 0 433 303 98 37 chr10 126145357 126145752 -14171013 - L1ME LINE L1 -319 5802 5376 455 305 37 6 chr10 126146388 126146552 -14170213 + MIR SINE MIR 28 196 -66 600 184 0 32 chr10 126146650 126146835 -14169930 + (CAT)n Simple_repeat Simple_repeat 1 179 0 334 311 10 0 chr10 126146837 126146940 -14169825 + (CACCAT)n Simple_repeat Simple_repeat 5 108 0 423 266 0 0 chr10 126146946 126147119 -14169646 + (CAT)n Simple_repeat Simple_repeat 1 173 0 512 277 3 6 chr10 126147143 126147494 -14169271 + (CAT)n Simple_repeat Simple_repeat 1 350 0 447 236 0 0 chr10 126147784 126147924 -14168841 + (CAT)n Simple_repeat Simple_repeat 1 140 0 480 241 0 0 chr10 126147948 126148106 -14168659 + (CAT)n Simple_repeat Simple_repeat 1 158 0 210 282 0 0 chr10 126148149 126148252 -14168513 + (CAT)n Simple_repeat Simple_repeat 2 104 0 552 286 111 15 chr10 126148437 126148636 -14168129 + MIR SINE MIR 2 220 -42 182 264 73 55 chr10 126148770 126148880 -14167885 - MIR3 SINE MIR -90 118 7 511 306 49 7 chr10 126151088 126151232 -14165533 - MIR SINE MIR -78 184 35 323 267 9 3 chr10 126152202 126152308 -14164457 - MLT1I LTR MaLR 0 424 318 227 260 13 26 chr10 126152419 126152496 -14164269 - MLT1J2 LTR MaLR -306 144 69 1047 158 0 12 chr10 126152545 126152709 -14164056 + AluJo SINE Alu 126 287 -25 2163 130 7 0 chr10 126153045 126153353 -14163412 + AluSx SINE Alu 1 310 -2 2172 151 14 22 chr10 126154117 126154475 -14162290 - THE1A LTR MaLR 0 355 1 12165 82 9 9 chr10 126154475 126156054 -14160711 - THE1B-int LTR MaLR 0 1580 1 2256 109 42 31 chr10 126156056 126156414 -14160351 - THE1B LTR MaLR -2 362 1 932 231 174 26 chr10 126157651 126158073 -14158692 - Charlie2 DNA MER1_type 0 2862 2365 1990 121 31 0 chr10 126158073 126158363 -14158402 + AluSx SINE Alu 1 299 -13 932 231 174 26 chr10 126158363 126158399 -14158366 - Charlie2 DNA MER1_type -497 2365 2336 267 307 66 0 chr10 126158404 126158541 -14158224 - Charlie2 DNA MER1_type -2548 314 169 280 123 31 31 chr10 126160228 126160293 -14156472 - Charlie2 DNA MER1_type -434 2428 2364 1170 113 25 0 chr10 126160641 126160801 -14155964 - AluSg/x SINE Alu -14 298 135 2088 128 0 0 chr10 126160802 126161099 -14155666 - AluSq SINE Alu -7 306 10 308 277 61 11 chr10 126161151 126161266 -14155499 - MIR SINE MIR -63 145 42 190 220 136 0 chr10 126162142 126162201 -14154564 - MIR SINE MIR -64 144 78 210 91 0 0 chr10 126163076 126163109 -14153656 + (TG)n Simple_repeat Simple_repeat 1 33 0 277 109 36 0 chr10 126163145 126163200 -14153565 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 234 333 185 25 chr10 126163469 126163712 -14153053 - L2 LINE L2 -1 3271 2990 427 227 33 53 chr10 126166540 126166690 -14150075 + Charlie8 DNA MER1_type 43 189 -2228 216 358 115 0 chr10 126167022 126167170 -14149595 + L2 LINE L2 3104 3268 -4 338 289 74 71 chr10 126167488 126167951 -14148814 + L2 LINE L2 2690 3176 -96 195 327 75 61 chr10 126168693 126168907 -14147858 + MIR SINE MIR 13 229 -33 582 292 15 10 chr10 126169343 126169545 -14147220 - MER63A DNA MER1_type 0 210 8 1929 117 35 0 chr10 126169776 126170058 -14146707 + AluSg SINE Alu 1 292 -18 541 226 129 19 chr10 126170136 126170291 -14146474 - MER5B DNA MER1_type -5 173 2 489 140 204 0 chr10 126170849 126170942 -14145823 - MER81 DNA DNA -1 113 2 287 293 0 24 chr10 126171421 126171544 -14145221 + MER113 DNA MER1_type? 28 147 -374 287 235 122 0 chr10 126171655 126171753 -14145012 + MER45 DNA AcHobo 1 110 -1471 246 281 108 36 chr10 126172417 126172556 -14144209 - MIR SINE MIR -81 181 33 754 256 28 0 chr10 126173759 126173970 -14142795 - MER20 DNA MER1_type -2 217 1 288 286 80 9 chr10 126174511 126174623 -14142142 + MIR SINE MIR 34 153 -109 392 326 71 0 chr10 126174805 126174989 -14141776 - MIR SINE MIR -51 211 15 260 299 84 0 chr10 126176855 126176962 -14139803 + MER5A DNA MER1_type 1 116 -73 1961 158 0 23 chr10 126177941 126178251 -14138514 - AluJo SINE Alu -9 303 1 22 35 0 0 chr10 126178260 126178289 -14138476 + AT_rich Low_complexity Low_complexity 1 29 0 215 167 0 21 chr10 126180590 126180638 -14136127 + A-rich Low_complexity Low_complexity 1 47 0 235 237 176 0 chr10 126180676 126180778 -14135987 + MIR SINE MIR 82 202 -60 236 276 115 0 chr10 126181869 126181956 -14134809 - MER5A DNA MER1_type -84 105 9 2131 148 7 0 chr10 126181984 126182289 -14134476 + AluSx SINE Alu 1 307 -5 492 257 89 34 chr10 126182405 126182584 -14134181 + MER5A DNA MER1_type 1 189 0 2461 158 58 94 chr10 126182929 126183436 -14133329 - MER92B LTR ERV1 -1 635 111 2607 78 19 6 chr10 126183436 126183795 -14132970 + THE1B LTR MaLR 1 364 0 2461 158 58 94 chr10 126183795 126183877 -14132888 - MER92B LTR ERV1 -525 111 70 1989 161 3 7 chr10 126183877 126184187 -14132578 - AluJo SINE Alu -2 310 2 2461 158 58 94 chr10 126184187 126184255 -14132510 - MER92B LTR ERV1 -566 70 1 338 351 92 61 chr10 126184318 126184646 -14132119 + L1MC4a LINE L1 6198 6535 -1273 2301 90 0 29 chr10 126184905 126185215 -14131550 + AluSg SINE Alu 1 301 -9 383 125 16 47 chr10 126185363 126185491 -14131274 + GA-rich Low_complexity Low_complexity 2 125 0 238 256 8 8 chr10 126185501 126185618 -14131147 + (TGGA)n Simple_repeat Simple_repeat 4 120 0 752 191 6 0 chr10 126185629 126185807 -14130958 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 259 250 133 22 chr10 126187301 126187447 -14129318 - MIR SINE MIR -45 163 12 2365 115 0 0 chr10 126187587 126187900 -14128865 - AluSq SINE Alu 0 313 1 276 271 73 0 chr10 126187946 126188042 -14128723 + MER5A DNA MER1_type 7 109 -80 452 303 11 11 chr10 126189173 126189351 -14127414 + GA-rich Low_complexity Low_complexity 1 178 0 247 303 46 28 chr10 126189409 126189518 -14127247 + MER5B DNA MER1_type 5 115 -63 320 245 56 49 chr10 126189523 126189666 -14127099 + MIR SINE MIR 115 258 -4 201 312 0 13 chr10 126189755 126189832 -14126933 - MIR SINE MIR -157 105 30 390 162 6 3 chr10 126189854 126189930 -14126835 - AluJ/FLAM SINE Alu -244 58 1 668 138 163 0 chr10 126190012 126190135 -14126630 + MLT1D LTR MaLR 363 505 0 26 50 0 0 chr10 126190142 126190182 -14126583 + AT_rich Low_complexity Low_complexity 1 40 0 264 299 39 24 chr10 126190358 126190485 -14126280 + MIR SINE MIR 13 142 -66 564 227 6 52 chr10 126190493 126190665 -14126100 - L2 LINE L2 -3 3310 3147 868 215 14 7 chr10 126190685 126190873 -14125892 + L1MD2 LINE L1 5716 5907 -452 1233 184 10 0 chr10 126190873 126191074 -14125691 + AluJo SINE Alu 89 291 -21 494 228 71 56 chr10 126191074 126191482 -14125283 + L1MD2 LINE L1 5899 6357 -2 2239 115 43 0 chr10 126191583 126191932 -14124833 - THE1B LTR MaLR 0 364 1 36 0 0 0 chr10 126192090 126192126 -14124639 + AT_rich Low_complexity Low_complexity 1 36 0 334 240 58 16 chr10 126192136 126192257 -14124508 + L1MC5 LINE L1 7660 7785 -176 537 126 27 54 chr10 126192348 126192459 -14124306 + MLT2B1 LTR ERVL 1 108 -412 752 218 195 23 chr10 126192486 126192748 -14124017 - LTR16A1 LTR ERVL -4 487 147 283 262 12 24 chr10 126192751 126192835 -14123930 + MER117 DNA MER1_type 102 184 -13 219 240 0 0 chr10 126192899 126192949 -14123816 - L2 LINE L2 -2 3311 3262 631 228 114 10 chr10 126193226 126193428 -14123337 + MIR SINE MIR 6 228 -34 2213 117 3 7 chr10 126193631 126193929 -14122836 + AluSc SINE Alu 1 297 -12 1548 123 200 26 chr10 126194104 126194414 -14122351 + THE1B LTR MaLR 1 364 0 953 172 18 41 chr10 126194631 126194800 -14121965 + AluJo SINE Alu 16 180 -132 1171 206 18 29 chr10 126195580 126195857 -14120908 - L1MD1 LINE L1 -40 6202 5929 1420 135 5 10 chr10 126195863 126196090 -14120675 + AluJb SINE Alu 106 331 0 1123 198 12 8 chr10 126196096 126196343 -14120422 - L1MD1 LINE L1 -320 5922 5675 1306 184 16 55 chr10 126196343 126196652 -14120113 - LTR29 LTR ERV1 0 622 326 1714 138 0 59 chr10 126196921 126197312 -14119453 - AluJo SINE Alu 0 383 10 2074 172 42 2 chr10 126197321 126197723 -14119042 - L1MD1 LINE L1 -571 5671 5254 2262 100 7 23 chr10 126200189 126200543 -14116222 - AluSx SINE Alu 0 312 1 1894 167 3 10 chr10 126200543 126200842 -14115923 - AluJo SINE Alu -13 299 3 2405 98 0 3 chr10 126201247 126201553 -14115212 - AluSq SINE Alu -4 309 5 526 276 18 24 chr10 126201600 126201770 -14114995 - L3 LINE CR1 -8 1569 1401 1822 167 33 0 chr10 126202310 126202623 -14114142 - AluJo SINE Alu 0 322 1 1743 120 55 73 chr10 126203075 126203457 -14113308 + THE1C LTR MaLR 1 375 0 2315 128 0 0 chr10 126204211 126204517 -14112248 - AluSx SINE Alu -6 306 1 2391 193 102 26 chr10 126204619 126204903 -14111862 + MER77 LTR ERV1 30 291 -314 2141 104 3 17 chr10 126204903 126205200 -14111565 + AluY SINE Alu 1 293 -18 2391 193 102 26 chr10 126205200 126205445 -14111320 + MER77 LTR ERV1 291 599 -6 199 375 31 0 chr10 126205478 126205574 -14111191 + MER5A DNA MER1_type 91 189 0 2294 217 34 46 chr10 126205693 126205760 -14111005 + MER119 DNA MER1_type 1 67 -516 2133 116 0 0 chr10 126205760 126206095 -14110670 - AluSx SINE Alu 0 337 3 2294 217 34 46 chr10 126206095 126206615 -14110150 + MER119 DNA MER1_type 67 583 0 422 265 103 80 chr10 126206621 126206867 -14109898 + L1MC4 LINE L1 7352 7591 -451 2256 123 0 0 chr10 126206867 126207168 -14109597 + AluSx SINE Alu 1 301 -11 422 265 103 80 chr10 126207168 126207450 -14109315 + L1MC4 LINE L1 7591 8040 -2 1666 180 54 11 chr10 126207890 126208240 -14108525 + MLT1A1 LTR MaLR 1 365 0 2351 114 7 0 chr10 126208256 126208563 -14108202 + AluSx SINE Alu 2 310 -2 1072 124 9 4 chr10 126208576 126208793 -14107972 + AluSx SINE Alu 2 312 0 355 277 7 64 chr10 126208805 126208946 -14107819 + L1ME3 LINE L1 6032 6164 0 240 111 0 0 chr10 126208959 126208995 -14107770 + (A)n Simple_repeat Simple_repeat 1 36 0 2108 120 34 0 chr10 126209136 126209428 -14107337 + AluSx SINE Alu 1 302 -10 613 272 91 21 chr10 126210650 126210734 -14106031 - MIR SINE MIR 0 262 185 1349 143 55 138 chr10 126210734 126210835 -14105930 + MLT1A1 LTR MaLR 1 109 -256 2410 83 0 0 chr10 126210835 126211125 -14105640 + AluSx SINE Alu 5 294 -18 1349 143 55 138 chr10 126211125 126211421 -14105344 + MLT1A1 LTR MaLR 109 365 0 613 272 91 21 chr10 126211421 126211579 -14105186 - MIR SINE MIR -77 185 3 2011 149 3 0 chr10 126211616 126211911 -14104854 + AluSx SINE Alu 1 296 -16 224 250 76 22 chr10 126212787 126212879 -14103886 + MIR SINE MIR 33 129 -79 2388 113 0 0 chr10 126212960 126213269 -14103496 - AluSx SINE Alu -3 309 1 188 320 13 0 chr10 126213379 126213454 -14103311 - L2 LINE L2 -269 3044 2969 376 305 86 47 chr10 126213557 126213708 -14103057 - L2 LINE L2 -474 2840 2696 1669 133 0 94 chr10 126213708 126213858 -14102907 + AluJo SINE Alu 1 105 -197 471 35 0 0 chr10 126213858 126213915 -14102850 + (CA)n Simple_repeat Simple_repeat 2 58 0 1669 133 0 94 chr10 126213915 126214095 -14102670 + AluJo SINE Alu 105 300 -2 376 305 86 47 chr10 126214095 126214304 -14102461 - L2 LINE L2 -618 2696 2466 267 339 18 18 chr10 126215225 126215337 -14101428 + L2 LINE L2 3161 3272 0 289 330 79 9 chr10 126215399 126215572 -14101193 + MIR3 SINE MIR 3 183 -60 2181 102 7 0 chr10 126216043 126216328 -14100437 - AluSx SINE Alu -19 293 7 2274 181 68 21 chr10 126216343 126216856 -14099909 + MER74A LTR ERVL 22 558 0 214 340 0 43 chr10 126216857 126216951 -14099814 + L2 LINE L2 3155 3244 -28 292 105 53 0 chr10 126216953 126217010 -14099755 + CT-rich Low_complexity Low_complexity 1 60 0 180 158 0 0 chr10 126217001 126217039 -14099726 + C-rich Low_complexity Low_complexity 1 38 0 * 1973 128 53 0 chr10 126217045 126217326 -14099439 - AluSx SINE Alu -16 296 1 2275 108 0 0 chr10 126217980 126218275 -14098490 + AluSx SINE Alu 1 295 -17 2300 105 0 0 chr10 126218277 126218573 -14098192 + AluSg SINE Alu 1 296 -14 338 253 0 12 chr10 126218974 126219057 -14097708 - MER94 DNA DNA -51 83 2 2389 116 0 0 chr10 126221576 126221887 -14094878 + AluSx SINE Alu 2 312 0 1467 133 148 4 chr10 126223228 126223492 -14093273 + AluJb SINE Alu 1 302 0 1653 153 49 7 chr10 126223795 126224103 -14092662 - MLT1B LTR MaLR -69 321 1 2168 111 47 0 chr10 126224309 126224607 -14092158 - AluSx SINE Alu 0 312 1 871 251 84 60 chr10 126224676 126225127 -14091638 + MLT1C LTR MaLR 6 467 0 207 0 0 0 chr10 126225451 126225474 -14091291 + (T)n Simple_repeat Simple_repeat 1 23 0 2319 107 0 0 chr10 126226824 126227123 -14089642 - AluSc SINE Alu -9 300 2 2044 120 0 0 chr10 126227705 126227979 -14088786 - AluSx SINE Alu -8 304 31 2286 104 0 7 chr10 126228127 126228424 -14088341 - AluSq SINE Alu -18 295 1 1646 185 0 23 chr10 126228936 126229238 -14087527 + AluJb SINE Alu 1 295 -17 573 101 0 0 chr10 126229241 126229320 -14087445 + AluS SINE Alu 2 80 -232 290 267 23 23 chr10 126229330 126229416 -14087349 - MIR SINE MIR -105 157 72 1905 153 3 7 chr10 126229431 126229719 -14087046 + AluJo SINE Alu 1 287 -25 214 288 102 8 chr10 126229868 126229986 -14086779 - MIR3 SINE MIR -43 165 37 211 213 21 0 chr10 126230053 126230100 -14086665 + G-rich Low_complexity Low_complexity 2 49 0 356 293 175 24 chr10 126230441 126230772 -14085993 + L2 LINE L2 2892 3272 0 2467 86 0 0 chr10 126230840 126231141 -14085624 - AluY SINE Alu -10 301 1 1995 137 7 0 chr10 126231471 126231749 -14085016 + AluSx SINE Alu 12 291 -21 2178 116 0 0 chr10 126232654 126232947 -14083818 - AluSx SINE Alu -19 293 1 429 315 56 42 chr10 126233037 126233253 -14083512 + L1ME4a LINE L1 5902 6120 -1 1845 179 3 6 chr10 126233275 126233588 -14083177 + AluJb SINE Alu 1 312 0 364 301 98 62 chr10 126233939 126234132 -14082633 + MIR SINE MIR 10 209 -53 2336 88 0 3 chr10 126234172 126234466 -14082299 + AluSx SINE Alu 1 293 -19 2276 123 0 0 chr10 126234474 126234782 -14081983 + AluSx SINE Alu 1 308 -4 257 246 0 15 chr10 126234854 126234919 -14081846 + MER5B DNA MER1_type 5 68 -110 2303 113 0 0 chr10 126236066 126236367 -14080398 + AluSx SINE Alu 1 301 -11 188 321 0 0 chr10 126236495 126236551 -14080214 - MIR SINE MIR -62 146 91 321 135 0 0 chr10 126237763 126237815 -14078950 + (CA)n Simple_repeat Simple_repeat 1 52 0 2343 85 7 3 chr10 126238809 126239102 -14077663 - AluSx SINE Alu -18 294 1 282 224 0 106 chr10 126239363 126239542 -14077223 + (TCTCTG)n Simple_repeat Simple_repeat 3 162 0 315 242 0 100 chr10 126239554 126239900 -14076865 + (TCTCTG)n Simple_repeat Simple_repeat 1 311 0 353 284 135 20 chr10 126240213 126240361 -14076404 + HAL1 LINE L1 1162 1326 -1181 303 277 53 78 chr10 126240520 126240726 -14076039 + HAL1 LINE L1 362 562 -1945 374 267 116 46 chr10 126240840 126241185 -14075580 + HAL1 LINE L1 1074 1442 -1065 605 160 75 4 chr10 126241185 126241382 -14075383 + AluJb SINE Alu 3 302 -10 2259 114 10 0 chr10 126241384 126241682 -14075083 + AluSq SINE Alu 2 302 -11 571 58 0 23 chr10 126241682 126241768 -14074997 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 526 279 69 40 chr10 126241782 126242058 -14074707 + HAL1 LINE L1 1427 1710 -797 236 220 17 17 chr10 126242106 126242165 -14074600 + HAL1 LINE L1 1705 1763 -744 180 329 126 12 chr10 126242169 126242336 -14074429 - L2 LINE L2 0 3313 3128 2429 86 3 3 chr10 126242538 126242842 -14073923 + AluSx SINE Alu 1 304 -8 1543 139 139 44 chr10 126242981 126243254 -14073511 - AluJb SINE Alu -13 299 1 2151 141 0 0 chr10 126243484 126243781 -14072984 + AluSx SINE Alu 1 297 -15 559 250 27 0 chr10 126245102 126245250 -14071515 + Charlie8 DNA MER1_type 7 158 -2259 21 36 0 0 chr10 126245898 126245926 -14070839 + AT_rich Low_complexity Low_complexity 1 28 0 603 206 29 15 chr10 126247637 126247773 -14068992 - MIR SINE MIR -30 232 95 209 324 174 23 chr10 126247767 126248026 -14068739 + L2 LINE L2 2940 3237 -35 * 1382 141 5 116 chr10 126248062 126248131 -14068634 + MER96B DNA MER1_type? 43 118 -299 2155 124 13 0 chr10 126248131 126248430 -14068335 - AluSx SINE Alu -7 305 3 1382 141 5 116 chr10 126248430 126248678 -14068087 + MER96B DNA MER1_type? 118 392 -25 1881 121 95 0 chr10 126248678 126248942 -14067823 + AluSx SINE Alu 1 289 -23 252 0 0 0 chr10 126248946 126248974 -14067791 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1382 141 5 116 chr10 126248974 126249020 -14067745 + MER96B DNA MER1_type? 322 371 -46 2137 109 3 3 chr10 126249268 126249579 -14067186 + AluSq SINE Alu 1 311 0 248 359 22 0 chr10 126249648 126249740 -14067025 + MIR SINE MIR 158 251 -11 2192 123 0 0 chr10 126249908 126250209 -14066556 + AluSc SINE Alu 1 301 -8 873 176 0 0 chr10 126250503 126250639 -14066126 + AluJo SINE Alu 1 136 -176 1921 156 7 0 chr10 126250639 126250921 -14065844 + AluJo SINE Alu 1 284 -28 281 325 12 0 chr10 126251735 126251815 -14064950 - MIR SINE MIR -55 153 73 2105 130 0 25 chr10 126252533 126252665 -14064100 + AluJb SINE Alu 5 139 -173 2042 116 32 3 chr10 126252665 126252987 -14063778 + AluSg SINE Alu 1 310 0 2105 130 0 25 chr10 126252987 126253170 -14063595 + AluJb SINE Alu 139 312 0 2049 97 83 14 chr10 126253173 126253462 -14063303 + AluSg SINE Alu 1 309 -1 201 159 0 0 chr10 126253496 126253540 -14063225 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2051 134 0 3 chr10 126254070 126254409 -14062356 + AluSx SINE Alu 1 338 0 2416 100 0 0 chr10 126254409 126254709 -14062056 + AluSg SINE Alu 1 300 -10 2413 90 0 3 chr10 126254713 126255014 -14061751 + AluSc SINE Alu 6 305 -4 708 240 93 5 chr10 126255026 126255230 -14061535 - MIR SINE MIR -26 236 15 2351 77 37 0 chr10 126257213 126257512 -14059253 + AluSp SINE Alu 1 310 -3 537 263 39 11 chr10 126257523 126257702 -14059063 - MIR SINE MIR -48 214 31 420 147 0 0 chr10 126258222 126258297 -14058468 + (GGGA)n Simple_repeat Simple_repeat 4 78 0 268 287 134 19 chr10 126259647 126259804 -14056961 - MER5A DNA MER1_type -8 181 7 475 164 9 55 chr10 126259980 126260090 -14056675 - MER69 DNA AcHobo 0 2526 2422 293 68 23 0 chr10 126260316 126260360 -14056405 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 1891 157 20 3 chr10 126260360 126260653 -14056112 - AluJb SINE Alu -14 298 1 285 289 193 0 chr10 126260914 126261028 -14055737 - MIR SINE MIR -3 259 124 450 231 81 50 chr10 126261056 126261216 -14055549 + MER63 DNA MER1_type 672 1061 0 351 245 128 0 chr10 126261216 126261310 -14055455 - MIR SINE MIR -136 126 21 275 231 90 26 chr10 126261603 126261681 -14055084 - MIR SINE MIR -170 92 10 190 327 39 10 chr10 126261784 126261888 -14054877 + MIR SINE MIR 27 133 -129 345 131 0 0 chr10 126262792 126262853 -14053912 + (GGA)n Simple_repeat Simple_repeat 1 61 0 22 0 0 0 chr10 126263618 126263640 -14053125 + GC_rich Low_complexity Low_complexity 1 22 0 1871 101 0 0 chr10 126265218 126265455 -14051310 + AluSq SINE Alu 1 237 -76 599 120 0 0 chr10 126265456 126265548 -14051217 + AluSg/x SINE Alu 207 298 -12 2428 87 3 0 chr10 126265548 126265848 -14050917 + AluSx SINE Alu 1 301 -11 405 39 0 0 chr10 126266020 126266071 -14050694 + (CA)n Simple_repeat Simple_repeat 1 51 0 515 138 0 37 chr10 126266163 126266272 -14050493 - FLAM_A SINE Alu -2 140 36 186 291 36 0 chr10 126266595 126266650 -14050115 + MIR SINE MIR 32 88 -120 747 263 108 120 chr10 126266941 126267542 -14049223 + L1ME4a LINE L1 5528 6121 0 1092 171 6 0 chr10 126267620 126267796 -14048969 - AluJo SINE Alu -11 301 125 322 92 15 15 chr10 126267805 126267870 -14048895 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 736 124 35 0 chr10 126267892 126268005 -14048760 - AluSg SINE Alu -192 118 2 836 190 43 5 chr10 126268007 126268191 -14048574 - L1MC1 LINE L1 -5 6328 6138 2225 146 12 39 chr10 126268240 126268650 -14048115 - LTR9 LTR ERV1 -82 530 132 1398 96 0 0 chr10 126268650 126268828 -14047937 + AluSp SINE Alu 136 313 0 387 60 0 0 chr10 126268828 126268878 -14047887 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 822 269 198 52 chr10 126268878 126269908 -14046857 + HAL1 LINE L1 110 1325 -1182 1031 175 6 0 chr10 126269908 126270079 -14046686 + FAM SINE Alu 4 175 0 822 269 198 52 chr10 126270079 126270190 -14046575 + HAL1 LINE L1 1325 1418 -1089 2076 192 82 62 chr10 126270223 126270692 -14046073 + L1ME1 LINE L1 5529 6174 -160 2081 111 6 57 chr10 126270692 126270868 -14045897 - AluSx SINE Alu -13 299 144 2438 90 3 0 chr10 126270868 126271169 -14045596 - AluSx SINE Alu -10 302 1 2081 111 6 57 chr10 126271169 126271307 -14045458 - AluSx SINE Alu -168 144 1 2076 192 82 62 chr10 126271307 126271471 -14045294 + L1ME1 LINE L1 6174 6333 -1 1501 148 79 20 chr10 126271480 126271783 -14044982 + L1MB7 LINE L1 5539 5859 -325 318 352 63 19 chr10 126271821 126271980 -14044785 - MER34 LTR ERV1 -29 513 348 596 307 24 16 chr10 126272132 126272383 -14044382 - MER34 LTR ERV1 -278 264 12 1295 231 22 13 chr10 126272393 126272709 -14044056 + L1MB8 LINE L1 5854 6172 -6 384 186 144 10 chr10 126272712 126272809 -14043956 + HAL1 LINE L1 1447 1556 -951 1244 160 60 52 chr10 126272837 126273105 -14043660 + AluJb SINE Alu 24 293 -19 2078 133 13 0 chr10 126273307 126273609 -14043156 + AluSx SINE Alu 3 308 -4 255 157 0 0 chr10 126273609 126273660 -14043105 + GA-rich Low_complexity Low_complexity 1 51 0 402 230 20 85 chr10 126273660 126273804 -14042961 + HAL1 LINE L1 2292 2444 -63 281 26 26 0 chr10 126273804 126273842 -14042923 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1943 106 0 18 chr10 126273844 126274128 -14042637 - AluSg SINE Alu -31 279 1 402 230 20 85 chr10 126274128 126274180 -14042585 + HAL1 LINE L1 2445 2478 -29 32 26 0 0 chr10 126274187 126274226 -14042539 + AT_rich Low_complexity Low_complexity 1 39 0 223 294 0 0 chr10 126274291 126274342 -14042423 - MIR SINE MIR 0 262 212 1499 190 7 3 chr10 126274364 126274653 -14042112 - AluJo SINE Alu -22 290 1 190 295 168 21 chr10 126274839 126274934 -14041831 - MIR SINE MIR -68 140 32 2434 50 0 3 chr10 126274983 126275280 -14041485 - AluY SINE Alu -15 296 1 1945 107 61 0 chr10 126275340 126275620 -14041145 - AluSp SINE Alu -16 297 1 606 138 69 100 chr10 126275625 126275701 -14041064 - FLAM_C SINE Alu -185 127 55 2173 106 0 7 chr10 126275701 126276003 -14040762 - AluSx SINE Alu -12 300 1 606 138 69 100 chr10 126276003 126276056 -14040709 - FLAM_C SINE Alu -257 55 2 1883 148 0 19 chr10 126276536 126276854 -14039911 + AluJb SINE Alu 1 312 0 1062 88 0 0 chr10 126277431 126277568 -14039197 + AluSq/x SINE Alu 1 137 -175 2020 118 0 3 chr10 126277574 126277871 -14038894 + AluSx SINE Alu 8 303 -9 2091 110 23 0 chr10 126277939 126278239 -14038526 + AluSg SINE Alu 1 307 -3 889 182 0 19 chr10 126278545 126278704 -14038061 - MIR SINE MIR -100 162 7 461 158 0 0 chr10 126278708 126278790 -14037975 + AluS SINE Alu 226 307 -4 250 257 103 37 chr10 126280583 126280719 -14036046 - MLT1J2 LTR MaLR -259 252 70 202 136 349 30 chr10 126280845 126280911 -14035854 - L2 LINE L2 -5 3267 3181 215 100 0 25 chr10 126282110 126282150 -14034615 + (TC)n Simple_repeat Simple_repeat 2 40 0 262 325 16 8 chr10 126282331 126282454 -14034311 + C-rich Low_complexity Low_complexity 3 126 0 419 308 139 0 chr10 126283111 126283283 -14033482 + MER117 DNA MER1_type 2 197 0 239 295 128 20 chr10 126284331 126284480 -14032285 - MIR SINE MIR -28 234 70 205 298 24 24 chr10 126284565 126284649 -14032116 - L3 LINE CR1 -179 1398 1315 190 233 0 23 chr10 126285994 126286037 -14030728 - MIR SINE MIR -109 153 112 791 272 62 11 chr10 126286577 126286849 -14029916 - HAL1 LINE L1 -961 1546 1261 674 152 14 36 chr10 126286851 126286989 -14029776 - AluSg/x SINE Alu 0 312 178 483 214 207 0 chr10 126287300 126287445 -14029320 - MER96 DNA MER1_type 0 175 1 876 272 43 8 chr10 126287445 126287680 -14029085 - MIR SINE MIR -8 254 12 483 251 18 42 chr10 126288322 126288489 -14028276 + MER103 DNA DNA 2 164 -2 259 299 75 37 chr10 126288936 126289070 -14027695 + L2 LINE L2 3129 3267 -5 380 297 189 11 chr10 126289090 126289265 -14027500 - MIR SINE MIR -25 237 32 1539 167 54 11 chr10 126289274 126289592 -14027173 - MER33 DNA MER1_type -9 315 1 181 237 0 0 chr10 126289599 126289637 -14027128 - MIR SINE MIR -222 40 3 1887 113 19 47 chr10 126291521 126291840 -14024925 - MLT1B LTR MaLR -80 310 1 274 220 70 20 chr10 126291876 126291976 -14024789 + L1MDa LINE L1 1665 1769 -4771 2043 121 0 34 chr10 126292031 126292353 -14024412 - AluSx SINE Alu -1 311 1 1601 182 47 7 chr10 126292356 126292653 -14024112 - AluJo SINE Alu 0 312 4 312 108 4 0 chr10 126292703 126292797 -14023968 - Alu SINE Alu 0 326 243 2136 70 7 23 chr10 126293897 126294197 -14022568 + AluY SINE Alu 1 295 -16 480 309 6 0 chr10 126294200 126294365 -14022400 - HAL1 LINE L1 -456 2051 1886 2229 103 0 3 chr10 126294378 126294689 -14022076 + AluY SINE Alu 2 311 0 2931 133 13 6 chr10 126294695 126295170 -14021595 - L1MB3 LINE L1 -11 6172 5695 301 192 0 0 chr10 126295174 126295226 -14021539 - MLT1A1 LTR MaLR 0 365 314 1255 196 42 46 chr10 126295258 126295564 -14021201 - AluJo SINE Alu -7 305 1 604 167 26 9 chr10 126295564 126295678 -14021087 - MLT1A1 LTR MaLR -42 323 208 1412 166 4 36 chr10 126295679 126295802 -14020963 - AluJo SINE Alu -56 256 144 2187 107 0 0 chr10 126295802 126296101 -14020664 - AluSx SINE Alu -9 303 5 1412 166 4 36 chr10 126296101 126296230 -14020535 - AluJo SINE Alu -168 144 12 919 144 39 0 chr10 126296239 126296392 -14020373 - MLT1A1 LTR MaLR -206 159 1 1450 176 0 12 chr10 126296392 126296642 -14020123 - L1MB3 LINE L1 -475 5696 5450 1513 110 5 0 chr10 126296661 126296879 -14019886 - AluSg/x SINE Alu -7 305 87 1855 115 0 25 chr10 126297041 126297327 -14019438 - AluSc SINE Alu -30 279 1 2279 87 3 0 chr10 126297327 126297624 -14019141 - AluSc SINE Alu -10 299 1 1352 122 24 0 chr10 126297708 126297913 -14018852 + AluSg/x SINE Alu 86 295 -17 1942 106 14 20 chr10 126297924 126298217 -14018548 + AluSx SINE Alu 2 292 -20 32 0 0 0 chr10 126298820 126298852 -14017913 + AT_rich Low_complexity Low_complexity 1 32 0 1900 150 0 0 chr10 126299188 126299475 -14017290 + AluSx SINE Alu 1 287 -25 186 43 0 0 chr10 126300157 126300180 -14016585 + (A)n Simple_repeat Simple_repeat 1 23 0 240 59 0 0 chr10 126301388 126301422 -14015343 + (A)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr10 126302357 126302378 -14014387 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 126302999 126303022 -14013743 + (A)n Simple_repeat Simple_repeat 1 23 0 897 235 260 11 chr10 126303755 126304121 -14012644 - L2 LINE L2 -990 2324 1868 2292 87 0 7 chr10 126304139 126304448 -14012317 + AluSx SINE Alu 1 307 -5 822 116 14 48 chr10 126304537 126304684 -14012081 + AluSc SINE Alu 168 309 0 328 125 21 0 chr10 126304703 126304751 -14012014 + Tigger5 DNA MER2_type 29 77 -2246 239 250 109 0 chr10 126304751 126304815 -14011950 - Tigger5 DNA MER2_type -2 2321 2251 266 179 0 119 chr10 126304815 126304899 -14011866 + Tigger5 DNA MER2_type 2250 2323 0 253 111 0 0 chr10 126304904 126304940 -14011825 + LTR33A LTR ERVL 487 522 -1 231 303 0 0 chr10 126304948 126305014 -14011751 - MIR SINE MIR -112 150 85 2047 140 0 3 chr10 126306070 126306384 -14010381 - AluSq SINE Alu 0 313 1 180 67 22 44 chr10 126306450 126306495 -14010270 + (TA)n Simple_repeat Simple_repeat 2 45 0 1605 157 31 11 chr10 126306676 126306962 -14009803 - AluJo SINE Alu -18 294 3 1993 123 10 17 chr10 126306995 126307296 -14009469 - AluSx SINE Alu -13 299 1 694 184 16 16 chr10 126307305 126307430 -14009335 - FLAM_C SINE Alu -17 126 2 396 252 80 77 chr10 126307451 126307776 -14008989 + L1MEd LINE L1 904 1229 -4890 202 229 0 42 chr10 126308558 126308606 -14008159 - L2 LINE L2 -24 3248 3203 2262 78 0 0 chr10 126309193 126309489 -14007276 - AluSc SINE Alu -13 296 1 979 124 92 0 chr10 126311344 126311497 -14005268 - AluSx SINE Alu -143 169 3 2054 112 3 13 chr10 126311796 126312108 -14004657 + AluSq SINE Alu 1 309 -4 1415 197 8 0 chr10 126312158 126312412 -14004353 + AluJo SINE Alu 1 256 -56 1645 174 7 3 chr10 126312892 126313190 -14003575 - AluJo SINE Alu -13 299 1 1969 148 0 0 chr10 126313405 126313703 -14003062 - AluSx SINE Alu -14 298 1 2291 100 6 3 chr10 126313705 126314016 -14002749 - AluSx SINE Alu 0 312 1 1907 143 0 3 chr10 126314020 126314321 -14002444 - AluSx SINE Alu -12 300 1 359 295 86 0 chr10 126314502 126314607 -14002158 - L2 LINE L2 0 3313 3200 22 0 0 0 chr10 126314629 126314651 -14002114 + AT_rich Low_complexity Low_complexity 1 22 0 2385 66 3 0 chr10 126316034 126316336 -14000429 - AluY SINE Alu -8 303 1 783 211 30 24 chr10 126316627 126316793 -13999972 - FRAM SINE Alu -10 166 1 2101 99 0 0 chr10 126316815 126317128 -13999637 + AluSq SINE Alu 1 313 0 920 167 0 0 chr10 126317689 126317839 -13998926 - FRAM SINE Alu -31 145 1 297 0 0 0 chr10 126317839 126317872 -13998893 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 185 0 40 0 chr10 126317873 126317898 -13998867 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 8751 35 9 131 chr10 126317898 126319313 -13997452 - SVA Other Other -23 1363 122 887 65 0 0 chr10 126320577 126320684 -13996081 + AluSq/x SINE Alu 30 136 -176 2365 85 0 0 chr10 126320685 126320991 -13995774 + AluSg SINE Alu 1 306 -4 1169 162 10 10 chr10 126321174 126321371 -13995394 + AluJo SINE Alu 86 282 -30 1718 140 0 4 chr10 126321816 126322107 -13994658 + AluSx SINE Alu 22 311 0 21 89 0 0 chr10 126323441 126323497 -13993268 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr10 126323686 126323714 -13993051 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr10 126324963 126324996 -13991769 + AT_rich Low_complexity Low_complexity 1 33 0 2283 92 0 7 chr10 126327283 126327575 -13989190 + AluSx SINE Alu 1 290 -22 2047 104 0 62 chr10 126327577 126327885 -13988880 + AluSc SINE Alu 15 303 -6 1634 137 29 76 chr10 126327893 126328208 -13988557 + AluJb SINE Alu 1 300 -12 1625 282 113 32 chr10 126328409 126329745 -13987020 + L2 LINE L2 1763 3237 -35 323 316 49 101 chr10 126330050 126330357 -13986408 + L2 LINE L2 2947 3237 -35 2393 115 0 0 chr10 126331070 126331382 -13985383 - AluSq SINE Alu -1 312 1 2387 87 0 0 chr10 126331955 126332244 -13984521 - AluSx SINE Alu -23 289 1 2285 93 0 0 chr10 126333168 126333562 -13983203 + AluSg SINE Alu 1 394 0 23 92 0 0 chr10 126333684 126333749 -13983016 + AT_rich Low_complexity Low_complexity 1 65 0 2365 84 0 10 chr10 126333862 126334161 -13982604 + AluSq SINE Alu 3 298 -15 228 35 0 0 chr10 126335502 126335531 -13981234 + (CA)n Simple_repeat Simple_repeat 1 29 0 1843 145 194 30 chr10 126337961 126338395 -13978370 - MLT1D LTR MaLR 0 505 1 3561 146 76 102 chr10 126338720 126339071 -13977694 + L1MC2 LINE L1 5457 5816 -528 2112 89 98 9 chr10 126339071 126339397 -13977368 + THE1A LTR MaLR 1 355 0 3561 146 76 102 chr10 126339397 126339945 -13976820 + L1MC2 LINE L1 5816 6332 -12 707 243 93 119 chr10 126339966 126340178 -13976587 - L1ME3A LINE L1 -266 5904 5688 2370 100 3 0 chr10 126340178 126340489 -13976276 - AluSx SINE Alu 0 312 1 707 243 93 119 chr10 126340489 126341028 -13975737 - L1ME3A LINE L1 -482 5688 5171 2192 100 31 0 chr10 126341028 126341318 -13975447 + AluSx SINE Alu 2 300 -12 707 243 93 119 chr10 126341318 126341420 -13975345 - L1ME3A LINE L1 -999 5171 5068 24 0 0 0 chr10 126341499 126341523 -13975242 + AT_rich Low_complexity Low_complexity 1 24 0 1730 119 71 58 chr10 126341532 126341826 -13974939 + AluSx SINE Alu 1 298 -14 291 239 64 28 chr10 126341831 126341940 -13974825 - L1P LINE L1 -1131 5015 4903 840 286 62 67 chr10 126342103 126342523 -13974242 - LTR16B LTR ERVL -44 420 3 277 271 132 7 chr10 126342582 126342726 -13974039 - L1ME3A LINE L1 -1339 4807 4646 2118 110 0 40 chr10 126342984 126343285 -13973480 - AluSx SINE Alu -23 289 1 2172 98 37 7 chr10 126343327 126343623 -13973142 - AluSg SINE Alu -5 305 1 2245 108 0 0 chr10 126344282 126344579 -13972186 + AluSx SINE Alu 14 310 -2 381 287 148 13 chr10 126344713 126344950 -13971815 - MARNA DNA Mariner -43 543 275 2168 134 3 0 chr10 126345075 126345373 -13971392 + AluSx SINE Alu 1 299 -13 1082 127 0 19 chr10 126345976 126346134 -13970631 + FRAM SINE Alu 12 166 -10 240 292 0 0 chr10 126346393 126346489 -13970276 + (TA)n Simple_repeat Simple_repeat 2 97 0 1875 112 93 0 chr10 126346605 126346874 -13969891 + AluSx SINE Alu 1 294 -18 2244 108 0 7 chr10 126347000 126347305 -13969460 + AluSx SINE Alu 8 310 -2 1745 153 0 68 chr10 126347772 126347925 -13968840 + AluJo SINE Alu 1 122 -190 2285 106 3 7 chr10 126347925 126348226 -13968539 + AluSx SINE Alu 1 300 -12 1745 153 0 68 chr10 126348226 126348393 -13968372 + AluJo SINE Alu 122 299 -13 389 346 79 34 chr10 126348751 126349043 -13967722 - L2 LINE L2 0 3272 2968 2400 103 0 6 chr10 126349218 126349530 -13967235 - AluSx SINE Alu -2 310 1 443 231 19 0 chr10 126349534 126349638 -13967127 - L2 LINE L2 -568 2746 2641 853 192 42 10 chr10 126349749 126349942 -13966823 - MIR SINE MIR -14 248 50 1872 144 43 3 chr10 126350050 126350349 -13966416 + AluJo SINE Alu 1 311 -1 734 268 12 31 chr10 126350484 126350738 -13966027 - MIR SINE MIR 0 262 14 2143 126 10 0 chr10 126350841 126351142 -13965623 + AluSx SINE Alu 1 304 -8 1641 167 64 3 chr10 126351215 126351497 -13965268 - AluJo SINE Alu -13 299 1 217 239 14 28 chr10 126352201 126352272 -13964493 + L2 LINE L2 2947 3016 -256 2227 133 3 0 chr10 126352431 126352740 -13964025 - AluSx SINE Alu -2 310 1 1477 186 80 15 chr10 126353251 126353703 -13963062 + MLT1F LTR MaLR 1 567 0 273 57 0 0 chr10 126353865 126353900 -13962865 + (TC)n Simple_repeat Simple_repeat 2 36 0 781 67 45 20 chr10 126353903 126354433 -13962332 + (TA)n Simple_repeat Simple_repeat 1 542 0 1997 127 3 7 chr10 126354514 126354825 -13961940 - AluSx SINE Alu 0 310 1 2427 99 0 0 chr10 126354836 126355140 -13961625 - AluSg1 SINE Alu -5 304 1 278 287 125 7 chr10 126355331 126355467 -13961298 - L2 LINE L2 -1 3312 3161 2190 81 6 69 chr10 126355600 126355920 -13960845 - AluSq SINE Alu -13 300 1 26 0 0 0 chr10 126356080 126356106 -13960659 + AT_rich Low_complexity Low_complexity 1 26 0 2197 124 13 0 chr10 126356293 126356592 -13960173 - AluSx SINE Alu -9 303 1 499 166 317 14 chr10 126356779 126356924 -13959841 - MER5A DNA MER1_type 0 189 1 2521 70 3 0 chr10 126357298 126357599 -13959166 + AluSx SINE Alu 1 302 -10 2394 87 3 0 chr10 126359389 126359689 -13957076 + AluSx SINE Alu 1 301 -11 505 223 78 36 chr10 126359972 126360138 -13956627 + MIR SINE MIR 79 251 -11 372 103 0 0 chr10 126361127 126361185 -13955580 + (TG)n Simple_repeat Simple_repeat 2 59 0 1522 196 7 29 chr10 126361699 126362005 -13954760 - AluJo SINE Alu -9 303 5 2581 105 6 0 chr10 126362035 126362388 -13954377 - THE1A LTR MaLR 0 355 1 1702 210 3 0 chr10 126362993 126363298 -13953467 - AluJb SINE Alu -2 310 5 31 26 0 0 chr10 126363402 126363440 -13953325 + AT_rich Low_complexity Low_complexity 1 38 0 570 276 19 0 chr10 126363504 126363660 -13953105 + MIR SINE MIR 102 260 -2 358 235 92 21 chr10 126363746 126363901 -13952864 - L1ME4a LINE L1 -223 5898 5762 2234 85 0 4 chr10 126363930 126364247 -13952518 + AluSc SINE Alu 1 316 0 261 277 143 25 chr10 126364925 126365044 -13951721 - L2 LINE L2 -18 3254 3122 918 139 22 44 chr10 126365067 126365247 -13951518 - THE1C LTR MaLR 0 375 200 1115 126 0 0 chr10 126365253 126365453 -13951312 - AluSp SINE Alu 0 333 134 1065 135 51 17 chr10 126365455 126365633 -13951132 - THE1C LTR MaLR -191 184 1 774 277 123 18 chr10 126365710 126366135 -13950630 - L2 LINE L2 -234 3038 2562 1139 103 0 0 chr10 126366607 126366762 -13950003 - AluSg/x SINE Alu -12 300 146 716 66 0 0 chr10 126366866 126366957 -13949808 + AluY SINE Alu 3 93 -225 219 200 0 20 chr10 126367125 126367175 -13949590 + A-rich Low_complexity Low_complexity 6 54 0 662 241 84 118 chr10 126367669 126368134 -13948631 + MLT1J2 LTR MaLR 1 449 -1 701 225 56 0 chr10 126369387 126369529 -13947236 + MLT1J2 LTR MaLR 1 150 -300 1139 103 0 0 chr10 126369670 126369825 -13946940 + AluSg/x SINE Alu 146 300 -12 774 277 123 18 chr10 126370297 126370722 -13946043 + L2 LINE L2 2562 3038 -234 1065 135 51 17 chr10 126370799 126370977 -13945788 + THE1C LTR MaLR 1 184 -191 1142 119 0 0 chr10 126370979 126371167 -13945598 + AluSp SINE Alu 134 321 0 900 144 22 44 chr10 126371173 126371353 -13945412 + THE1C LTR MaLR 200 375 0 261 277 143 25 chr10 126371376 126371495 -13945270 + L2 LINE L2 3122 3254 -18 2233 85 0 4 chr10 126372173 126372490 -13944275 - AluSc SINE Alu 0 316 1 358 235 92 21 chr10 126372519 126372674 -13944091 + L1ME4a LINE L1 5762 5898 -223 589 275 19 0 chr10 126372760 126372920 -13943845 - MIR SINE MIR -2 260 98 31 26 0 0 chr10 126372981 126373019 -13943746 + AT_rich Low_complexity Low_complexity 1 38 0 1702 210 3 0 chr10 126373123 126373428 -13943337 + AluJb SINE Alu 5 310 -2 2599 105 6 0 chr10 126374033 126374386 -13942379 + THE1A LTR MaLR 1 355 0 1568 196 7 29 chr10 126374416 126374722 -13942043 + AluJo SINE Alu 5 303 -9 287 381 121 39 chr10 126375267 126375598 -13941167 + L2 LINE L2 2902 3259 -13 585 249 67 18 chr10 126376271 126376436 -13940329 - MIR SINE MIR -11 251 79 2414 84 3 0 chr10 126376719 126377018 -13939747 - AluSx SINE Alu -12 300 1 2548 66 3 0 chr10 126378811 126379112 -13937653 - AluSx SINE Alu -10 302 1 518 166 317 14 chr10 126379486 126379631 -13937134 + MER5A DNA MER1_type 1 189 0 2224 126 13 0 chr10 126379818 126380120 -13936645 + AluSx SINE Alu 1 306 -6 26 0 0 0 chr10 126380304 126380330 -13936435 + AT_rich Low_complexity Low_complexity 1 26 0 198 271 0 0 chr10 126380438 126380486 -13936279 + MIR SINE MIR 100 147 -115 2206 84 6 68 chr10 126380490 126380811 -13935954 + AluSq SINE Alu 1 301 -12 314 301 125 7 chr10 126380944 126381080 -13935685 + L2 LINE L2 3161 3312 -1 2447 99 0 0 chr10 126381271 126381575 -13935190 + AluSg1 SINE Alu 1 304 -5 2025 124 3 7 chr10 126381586 126381897 -13934868 + AluSx SINE Alu 1 310 0 340 236 107 62 chr10 126381962 126382187 -13934578 - L1MC5 LINE L1 -190 7771 7537 334 213 48 65 chr10 126382175 126382320 -13934445 - L1MCa LINE L1 -4361 2065 1941 * 255 61 0 0 chr10 126382333 126382366 -13934399 + (GA)n Simple_repeat Simple_repeat 2 34 0 1386 189 80 15 chr10 126382528 126382980 -13933785 - MLT1F LTR MaLR 0 567 1 2259 133 3 0 chr10 126383491 126383800 -13932965 + AluSx SINE Alu 1 310 -2 241 239 14 28 chr10 126383959 126384030 -13932735 - L2 LINE L2 -256 3016 2947 1673 167 64 3 chr10 126384735 126385017 -13931748 + AluJo SINE Alu 1 299 -13 2152 124 10 0 chr10 126385090 126385388 -13931377 - AluSx SINE Alu -11 301 1 871 266 15 30 chr10 126385482 126385745 -13931020 + MIR SINE MIR 4 262 0 1933 141 43 3 chr10 126385880 126386179 -13930586 - AluJo SINE Alu -1 311 1 943 202 40 21 chr10 126386238 126386480 -13930285 + MIR SINE MIR 10 248 -14 486 231 19 0 chr10 126386591 126386695 -13930070 + L2 LINE L2 2641 2746 -568 2431 100 0 6 chr10 126386699 126387010 -13929755 + AluSx SINE Alu 1 309 -3 478 339 82 38 chr10 126387185 126387477 -13929288 + L2 LINE L2 2968 3272 0 187 247 45 67 chr10 126387681 126387770 -13928995 - L3 LINE CR1 -105 1472 1386 1781 161 0 67 chr10 126387827 126388002 -13928763 - AluJo SINE Alu -5 307 163 2289 107 3 7 chr10 126388002 126388301 -13928464 - AluSx SINE Alu -14 298 1 1781 161 0 67 chr10 126388301 126388454 -13928311 - AluJo SINE Alu -149 163 1 2306 109 0 6 chr10 126388921 126389233 -13927532 - AluSx SINE Alu -2 310 1 2218 121 17 0 chr10 126389360 126389657 -13927108 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr10 126389696 126389720 -13927045 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2391 91 7 7 chr10 126389791 126390098 -13926667 - AluSx SINE Alu -5 307 1 22 56 0 0 chr10 126390152 126390188 -13926577 + AT_rich Low_complexity Low_complexity 1 36 0 1694 180 3 26 chr10 126390188 126390518 -13926247 + AluJo SINE Alu 1 312 0 1310 190 0 128 chr10 126390925 126391147 -13925618 - AluY SINE Alu 0 311 62 1530 82 0 0 chr10 126391147 126391330 -13925435 - AluY SINE Alu -128 183 1 2404 95 0 3 chr10 126391330 126391635 -13925130 - AluSx SINE Alu -8 304 1 1310 190 0 128 chr10 126391635 126391763 -13925002 - AluY SINE Alu -247 64 5 264 277 32 43 chr10 126391791 126391885 -13924880 + L2 LINE L2 3204 3296 -17 305 250 191 0 chr10 126391987 126392071 -13924694 + HAL1b LINE L1 1246 1345 -3 1422 159 69 153 chr10 126392629 126392973 -13923792 - MLT2D LTR ERVL 0 414 115 1976 146 0 23 chr10 126392973 126393275 -13923490 + AluJb SINE Alu 1 295 -17 1422 159 69 153 chr10 126393275 126393382 -13923383 - MLT2D LTR ERVL -299 115 1 2238 105 31 0 chr10 126393513 126393807 -13922958 + AluSg SINE Alu 1 303 -7 366 205 65 113 chr10 126394581 126394673 -13922092 + L1MC4a LINE L1 5314 5394 -2414 2358 83 17 0 chr10 126394673 126394973 -13921792 + AluSq SINE Alu 7 311 -2 366 205 65 113 chr10 126394973 126395065 -13921700 + L1MC4a LINE L1 5394 5489 -2319 225 0 0 0 chr10 126395791 126395816 -13920949 + (A)n Simple_repeat Simple_repeat 1 25 0 245 383 32 5 chr10 126395821 126396009 -13920756 + L1MC4a LINE L1 5510 5702 -2106 2151 100 11 7 chr10 126396011 126396291 -13920474 + AluSx SINE Alu 1 281 -31 264 120 0 0 chr10 126396292 126396342 -13920423 + (TC)n Simple_repeat Simple_repeat 1 50 0 213 39 0 0 chr10 126396342 126396368 -13920397 + (TA)n Simple_repeat Simple_repeat 1 26 0 651 233 98 10 chr10 126396384 126396577 -13920188 + L1MC4a LINE L1 5698 5907 -1901 2017 119 12 83 chr10 126396728 126397064 -13919701 - AluSx SINE Alu 0 312 1 2047 139 76 59 chr10 126397090 126397272 -13919493 + MLT1C LTR MaLR 1 178 -289 885 173 0 0 chr10 126397272 126397405 -13919360 + FLAM_C SINE Alu 1 133 0 2047 139 76 59 chr10 126397405 126397417 -13919348 + MLT1C LTR MaLR 178 188 -279 2229 118 3 0 chr10 126397417 126397713 -13919052 + AluSx SINE Alu 1 297 -15 2047 139 76 59 chr10 126397713 126397976 -13918789 + MLT1C LTR MaLR 188 467 0 444 291 30 111 chr10 126398041 126398275 -13918490 + L2 LINE L2 3015 3229 -43 945 191 64 122 chr10 126398419 126398630 -13918135 - MLT1C LTR MaLR -90 377 155 2267 114 0 13 chr10 126398630 126398946 -13917819 - AluSx SINE Alu 0 312 1 1719 166 0 4 chr10 126398950 126399227 -13917538 - AluJb SINE Alu -11 301 26 945 191 64 122 chr10 126399227 126399355 -13917410 - MLT1C LTR MaLR -315 152 53 576 309 28 11 chr10 126399488 126399669 -13917096 + MIR SINE MIR 9 192 -70 183 80 0 0 chr10 126399690 126399715 -13917050 + (A)n Simple_repeat Simple_repeat 1 25 0 1368 179 123 8 chr10 126399716 126399984 -13916781 + AluSg1 SINE Alu 1 299 -10 484 289 118 0 chr10 126400904 126401056 -13915709 + MIR SINE MIR 15 184 -78 1177 300 40 7 chr10 126401056 126401461 -13915304 - LTR16A LTR ERVL 0 457 17 323 313 0 0 chr10 126401477 126401560 -13915205 + MIR SINE MIR 178 260 -2 * 437 333 40 45 chr10 126401555 126401743 -13915022 - L2 LINE L2 -7 3265 3077 4533 96 3 19 chr10 126401743 126402202 -13914563 - LTR10E LTR ERV1 0 633 185 2274 79 0 50 chr10 126402202 126402520 -13914245 - AluY SINE Alu -9 302 1 4533 96 3 19 chr10 126402520 126402703 -13914062 - LTR10E LTR ERV1 -448 185 1 255 111 0 0 chr10 126402712 126402748 -13914017 - MADE1 DNA Mariner 0 80 45 386 335 27 116 chr10 126403016 126403158 -13913607 - L2 LINE L2 -549 2765 2612 384 59 0 0 chr10 126403158 126403209 -13913556 + (CA)n Simple_repeat Simple_repeat 2 52 0 386 335 27 116 chr10 126403209 126403366 -13913399 - L2 LINE L2 -702 2612 2503 2392 84 20 0 chr10 126403366 126403664 -13913101 + AluSx SINE Alu 1 304 -8 386 335 27 116 chr10 126403664 126403733 -13913032 - L2 LINE L2 -811 2503 2429 1884 138 209 21 chr10 126403910 126404287 -13912478 - LTR47A LTR ERVL -2 450 3 2198 114 0 3 chr10 126404383 126404680 -13912085 - AluSx SINE Alu -16 296 1 1018 161 42 10 chr10 126405306 126405498 -13911267 + LTR54 LTR ERV1 1 198 -312 2248 129 0 0 chr10 126405575 126405886 -13910879 + AluSx SINE Alu 1 311 -1 2058 112 24 3 chr10 126405922 126406218 -13910547 - AluSx SINE Alu -10 302 1 1891 110 55 63 chr10 126406225 126406606 -13910159 - Tigger2 DNA MER2_type -68 2650 2273 392 106 61 15 chr10 126406596 126406662 -13910103 - Tigger2 DNA MER2_type -2649 69 1 * 1582 199 13 17 chr10 126406709 126407010 -13909755 - AluJo SINE Alu 0 312 13 1176 146 19 10 chr10 126407025 126407230 -13909535 + LTR54 LTR ERV1 255 461 -49 25 0 0 0 chr10 126407878 126407903 -13908862 + GC_rich Low_complexity Low_complexity 1 25 0 236 323 126 39 chr10 126410338 126410465 -13906300 - MIR3 SINE MIR -15 193 56 199 344 0 56 chr10 126411627 126411717 -13905048 + MER5A DNA MER1_type 80 164 -25 1227 121 0 0 chr10 126413039 126413205 -13903560 - AluSg/x SINE Alu -7 305 140 189 276 121 0 chr10 126413855 126413913 -13902852 - L2 LINE L2 -19 3253 3189 192 77 0 0 chr10 126414841 126414867 -13901898 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 261 373 42 0 chr10 126415389 126415507 -13901258 + MIR SINE MIR 87 209 -53 857 98 0 61 chr10 126417231 126417383 -13899382 + FLAM_C SINE Alu 5 133 0 2210 124 3 0 chr10 126417475 126417774 -13898991 + AluSq SINE Alu 1 300 -13 1194 108 0 0 chr10 126417774 126417954 -13898811 + AluSg/x SINE Alu 134 312 0 309 266 172 0 chr10 126418016 126418144 -13898621 - MIR SINE MIR -66 196 47 2087 113 0 61 chr10 126418702 126419029 -13897736 - AluSx SINE Alu -3 309 3 2391 89 0 3 chr10 126419395 126419697 -13897068 + AluY SINE Alu 1 301 -10 1908 144 3 47 chr10 126419954 126420274 -13896491 - AluSx SINE Alu -4 308 3 253 258 92 58 chr10 126420497 126420617 -13896148 + MER5A DNA MER1_type 66 189 0 337 246 95 32 chr10 126420640 126420766 -13895999 - MIR SINE MIR -59 149 16 2016 89 9 89 chr10 126421593 126421754 -13895011 - AluSq SINE Alu -23 290 118 441 0 0 0 chr10 126421754 126421803 -13894962 + (TG)n Simple_repeat Simple_repeat 2 50 0 2016 89 9 89 chr10 126421803 126421816 -13894949 - AluSq SINE Alu -195 118 106 2544 56 0 13 chr10 126421816 126422121 -13894644 - AluY SINE Alu -10 301 1 2016 89 9 89 chr10 126422121 126422260 -13894505 - AluSq SINE Alu -207 106 1 577 255 31 12 chr10 126423505 126423666 -13893099 - L1ME3 LINE L1 -56 6106 5943 2264 125 0 0 chr10 126423674 126423979 -13892786 - AluSx SINE Alu -7 305 1 327 360 29 0 chr10 126424102 126424238 -13892527 - MIR SINE MIR -77 185 46 2457 146 87 2 chr10 126425473 126425919 -13890846 - MER31A LTR ERV1 -1 484 1 214 246 52 112 chr10 126427112 126427246 -13889519 - MIR SINE MIR -62 146 21 1953 103 8 0 chr10 126427772 126428024 -13888741 + AluSx SINE Alu 45 298 -14 199 306 81 27 chr10 126428282 126428393 -13888372 - MIR SINE MIR -19 243 127 2139 121 0 0 chr10 126428474 126428791 -13887974 - AluSx SINE Alu 0 317 1 223 288 121 8 chr10 126429778 126429910 -13886855 + L2 LINE L2 2914 3060 -212 1005 267 116 16 chr10 126430408 126430858 -13885907 - L1MC4 LINE L1 -1 8041 7547 2157 107 0 50 chr10 126431381 126431700 -13885065 + AluSx SINE Alu 1 303 -9 1824 178 0 3 chr10 126431755 126432042 -13884723 + AluJb SINE Alu 6 291 -21 738 166 23 0 chr10 126432445 126432707 -13884058 + CT-rich Low_complexity Low_complexity 1 268 0 1252 194 0 10 chr10 126432707 126432913 -13883852 - AluJo SINE Alu -24 288 85 1777 144 24 7 chr10 126434931 126435222 -13881543 + AluJo SINE Alu 1 296 -16 198 0 0 0 chr10 126435474 126435496 -13881269 + (T)n Simple_repeat Simple_repeat 1 22 0 186 26 77 26 chr10 126435540 126435579 -13881186 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2279 123 0 0 chr10 126435910 126436212 -13880553 + AluSx SINE Alu 1 302 -10 2181 102 16 20 chr10 126436606 126436910 -13879855 - AluSx SINE Alu -9 303 1 190 292 67 22 chr10 126437294 126437383 -13879382 + MIR SINE MIR 60 152 -56 2024 141 3 35 chr10 126438569 126438881 -13877884 - AluSx SINE Alu -8 304 3 620 197 78 7 chr10 126439153 126439339 -13877426 + MLT2C1 LTR ERVL 1 289 -108 189 74 0 0 chr10 126439339 126439366 -13877399 + (CCCTG)n Simple_repeat Simple_repeat 2 28 0 620 197 78 7 chr10 126439366 126439422 -13877343 + MLT2C1 LTR ERVL 289 340 -57 857 157 15 0 chr10 126439437 126439571 -13877194 + AluJo SINE Alu 1 136 -176 225 94 0 0 chr10 126439621 126439653 -13877112 + MLT2C1 LTR ERVL 366 397 0 189 107 0 0 chr10 126439730 126439758 -13877007 + (T)n Simple_repeat Simple_repeat 1 28 0 2255 101 0 7 chr10 126439989 126440306 -13876459 + AluSp SINE Alu 1 313 0 272 300 64 18 chr10 126440880 126440990 -13875775 - Charlie8 DNA MER1_type -2203 214 100 2074 132 0 0 chr10 126440990 126441278 -13875487 - AluSq SINE Alu -12 301 14 404 157 132 25 chr10 126441721 126441842 -13874923 + L1MA4 LINE L1 6166 6299 -1 2053 117 13 23 chr10 126441868 126442177 -13874588 + AluSx SINE Alu 7 312 0 21 71 0 0 chr10 126442178 126442220 -13874545 + AT_rich Low_complexity Low_complexity 1 42 0 1977 114 39 20 chr10 126442795 126443101 -13873664 - AluSx SINE Alu 0 312 1 1748 119 8 0 chr10 126443116 126443367 -13873398 - AluSx SINE Alu -59 253 1 4191 94 4 0 chr10 126444657 126445209 -13871556 - MER41A LTR ERV1 0 554 1 877 202 94 15 chr10 126445221 126445424 -13871341 - MER20 DNA MER1_type 0 219 1 408 218 54 48 chr10 126445516 126445663 -13871102 + L1M4 LINE L1 2441 2588 -3558 3607 83 43 54 chr10 126445957 126446369 -13870396 + MER41A LTR ERV1 1 416 -138 2328 115 0 3 chr10 126446369 126446674 -13870091 - AluSx SINE Alu -8 304 1 2421 79 0 0 chr10 126446684 126446975 -13869790 - AluSg SINE Alu 0 310 20 3607 83 43 54 chr10 126446975 126447107 -13869658 + MER41A LTR ERV1 425 550 -4 881 132 25 23 chr10 126447468 126447717 -13869048 + AluJo SINE Alu 2 311 -1 312 309 56 40 chr10 126448039 126448165 -13868600 - L2 LINE L2 -8 3264 3137 2545 75 0 0 chr10 126448264 126448569 -13868196 + AluY SINE Alu 1 305 -6 325 350 78 39 chr10 126448979 126449096 -13867669 + L2 LINE L2 1563 1674 -1640 2381 106 0 0 chr10 126449096 126449397 -13867368 + AluSg SINE Alu 1 301 -9 325 350 78 39 chr10 126449397 126449639 -13867126 + L2 LINE L2 1674 1936 -1378 405 0 0 0 chr10 126449890 126449935 -13866830 + (TG)n Simple_repeat Simple_repeat 2 46 0 666 322 115 52 chr10 126450239 126450892 -13865873 + L2 LINE L2 1819 2533 -781 2376 91 0 3 chr10 126450892 126451189 -13865576 + AluSq SINE Alu 1 296 -17 666 322 115 52 chr10 126451189 126451337 -13865428 + L2 LINE L2 2533 2670 -644 4261 166 52 22 chr10 126451419 126452382 -13864383 - MER52A LTR ERV1 0 1755 835 240 340 63 19 chr10 126452433 126452492 -13864273 - L1M4 LINE L1 -1917 4229 4174 2316 114 3 0 chr10 126452492 126452789 -13863976 - AluSx SINE Alu -14 298 1 240 340 63 19 chr10 126452789 126452935 -13863830 - L1M4 LINE L1 -1972 4174 4015 202 414 0 14 chr10 126453008 126453148 -13863617 + L2 LINE L2 2842 2979 -293 271 271 195 0 chr10 126453827 126453945 -13862820 - MIR SINE MIR 0 262 122 1360 144 125 57 chr10 126454017 126454129 -13862636 + AluJo SINE Alu 7 110 -202 2366 73 24 0 chr10 126454129 126454417 -13862348 - AluY SINE Alu -16 295 1 1360 144 125 57 chr10 126454417 126454568 -13862197 + AluJo SINE Alu 110 288 -24 657 282 109 40 chr10 126454570 126454815 -13861950 + MLT1J LTR MaLR 102 379 -132 1700 207 83 34 chr10 126454815 126455260 -13861505 - MLT1C LTR MaLR 0 467 1 657 282 109 40 chr10 126455260 126455362 -13861403 + MLT1J LTR MaLR 379 473 -38 201 253 72 60 chr10 126455814 126455897 -13860868 - MIR SINE MIR -12 250 167 2101 154 3 0 chr10 126455897 126456208 -13860557 + AluJb SINE Alu 1 312 0 262 143 0 20 chr10 126456242 126456291 -13860474 - MLT1J1 LTR MaLR -52 394 347 25 31 0 0 chr10 126456420 126456452 -13860313 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 126456557 126456581 -13860184 + AT_rich Low_complexity Low_complexity 1 24 0 2257 104 0 26 chr10 126456707 126457014 -13859751 - AluSx SINE Alu -13 299 1 234 325 25 0 chr10 126457158 126457238 -13859527 - L2 LINE L2 -3 3310 3229 522 108 48 0 chr10 126457573 126457656 -13859109 + AluY SINE Alu 218 304 -7 387 326 99 14 chr10 126457779 126457950 -13858815 + MIR3 SINE MIR 22 208 0 2569 74 0 3 chr10 126458295 126458604 -13858161 + AluSg SINE Alu 1 308 -2 1937 201 45 16 chr10 126459731 126460175 -13856590 + MLT1C LTR MaLR 11 467 0 957 134 0 0 chr10 126460231 126460358 -13856407 - FLAM_C SINE Alu -16 127 1 24 63 0 16 chr10 126460420 126460445 -13856320 + AT_rich Low_complexity Low_complexity 1 25 -37 2280 96 0 0 chr10 126460445 126460738 -13856027 - AluY SINE Alu -18 293 1 24 63 0 16 chr10 126460738 126460775 -13855990 + AT_rich Low_complexity Low_complexity 25 62 0 234 0 0 0 chr10 126461090 126461116 -13855649 + (T)n Simple_repeat Simple_repeat 1 26 0 740 172 0 0 chr10 126461610 126461726 -13855039 + FLAM_C SINE Alu 9 124 -19 2163 111 34 0 chr10 126461916 126462214 -13854551 - AluSg SINE Alu -2 308 1 1668 153 28 42 chr10 126462482 126462769 -13853996 - AluJo SINE Alu -29 283 1 1531 182 3 20 chr10 126463007 126463309 -13853456 + MLT1B LTR MaLR 1 297 -93 * 2461 113 14 3 chr10 126463302 126463664 -13853101 + THE1C LTR MaLR 9 374 -1 394 232 21 0 chr10 126463664 126463759 -13853006 + MLT1B LTR MaLR 294 390 0 2111 112 47 49 chr10 126464184 126464549 -13852216 - THE1B LTR MaLR 0 364 1 1769 171 46 83 chr10 126464627 126464811 -13851954 + MLT1C LTR MaLR 6 195 -272 1860 179 13 0 chr10 126464811 126465113 -13851652 + AluJo SINE Alu 5 310 -2 1769 171 46 83 chr10 126465113 126465408 -13851357 + MLT1C LTR MaLR 195 467 0 1986 129 7 24 chr10 126465522 126465843 -13850922 + AluSx SINE Alu 5 312 0 901 194 6 6 chr10 126466310 126466475 -13850290 - FRAM SINE Alu 0 166 2 688 161 55 91 chr10 126466732 126466931 -13849834 + MLT1C LTR MaLR 17 208 -259 871 126 0 22 chr10 126466931 126467066 -13849699 + FLAM_C SINE Alu 1 132 -1 2236 130 13 0 chr10 126467081 126467388 -13849377 + AluJo SINE Alu 1 311 -1 186 43 0 0 chr10 126467408 126467431 -13849334 + (CA)n Simple_repeat Simple_repeat 2 24 0 1012 229 29 4 chr10 126467478 126467723 -13849042 + MLT1C LTR MaLR 215 465 -2 2266 99 88 23 chr10 126467768 126468110 -13848655 + THE1B LTR MaLR 1 364 0 1218 219 69 60 chr10 126468214 126468443 -13848322 - MLT1D LTR MaLR 0 505 280 2400 94 0 3 chr10 126468443 126468751 -13848014 - AluSg SINE Alu -3 307 1 1218 219 69 60 chr10 126468751 126468847 -13847918 - MLT1D LTR MaLR -225 280 186 2254 104 0 13 chr10 126468847 126469145 -13847620 - AluSq SINE Alu -19 294 1 1218 219 69 60 chr10 126469145 126469269 -13847496 - MLT1D LTR MaLR -319 186 51 234 305 57 29 chr10 126469451 126469556 -13847209 + MIR SINE MIR 84 191 -71 336 222 18 63 chr10 126469691 126469825 -13846940 - L1MC4 LINE L1 -1339 6983 1994 2316 120 0 0 chr10 126469841 126470149 -13846616 + AluSg SINE Alu 3 310 0 2197 117 0 0 chr10 126470178 126470484 -13846281 - AluSx SINE Alu 0 306 1 195 42 0 0 chr10 126471043 126471067 -13845698 + (TG)n Simple_repeat Simple_repeat 1 24 0 443 233 110 27 chr10 126471275 126471421 -13845344 - MER69A DNA AcHobo -19 158 1 35 24 0 0 chr10 126471554 126471596 -13845169 + AT_rich Low_complexity Low_complexity 1 42 0 1900 158 0 7 chr10 126471654 126471946 -13844819 - AluJo SINE Alu -22 290 1 2323 88 0 16 chr10 126472032 126472339 -13844426 - AluSg SINE Alu -8 302 1 320 349 13 13 chr10 126472373 126472522 -13844243 - MIR SINE MIR -66 196 48 2187 119 3 0 chr10 126474094 126474388 -13842377 - AluSp SINE Alu -18 295 1 315 330 11 0 chr10 126474467 126474558 -13842207 - L1MC4 LINE L1 -1340 6702 6611 * 361 249 92 146 chr10 126474554 126474621 -13842144 - L1MC4a LINE L1 -1636 6172 6103 430 104 0 0 chr10 126474621 126474688 -13842077 + L1MA3 LINE L1 6239 6305 0 361 249 92 146 chr10 126474688 126474922 -13841843 - L1MC4a LINE L1 -1705 6103 5894 2538 96 0 0 chr10 126474922 126475234 -13841531 - AluSx SINE Alu 0 312 1 361 249 92 146 chr10 126475234 126475321 -13841444 - L1MC4a LINE L1 -1914 5894 5804 2334 98 0 7 chr10 126475541 126475838 -13840927 - AluSq SINE Alu -18 295 1 2472 87 0 3 chr10 126475842 126476154 -13840611 - AluSq SINE Alu -2 311 1 873 126 0 49 chr10 126476160 126476303 -13840462 - FRAM SINE Alu -7 169 34 276 30 0 0 chr10 126476479 126476512 -13840253 + (TTTTA)n Simple_repeat Simple_repeat 5 37 0 2072 98 4 4 chr10 126476516 126476791 -13839974 - AluSx SINE Alu -37 275 1 1503 184 90 45 chr10 126476940 126477275 -13839490 - MLT1A1 LTR MaLR 0 365 10 2543 171 73 8 chr10 126477288 126477769 -13838996 - MLT2B1 LTR ERVL -8 512 1 2261 98 7 3 chr10 126477814 126478110 -13838655 + AluSq SINE Alu 17 313 0 9116 33 11 225 chr10 126478158 126479893 -13836872 + SVA Other Other 24 1386 0 23 0 0 0 chr10 126479970 126479993 -13836772 + AT_rich Low_complexity Low_complexity 1 23 0 293 233 125 19 chr10 126480232 126480344 -13836421 - MIR3 SINE MIR -18 190 63 770 181 34 51 chr10 126480945 126481122 -13835643 - MER5B DNA MER1_type -1 177 4 311 117 76 68 chr10 126481618 126481699 -13835066 + LTR9 LTR ERV1 457 528 -84 180 0 0 0 chr10 126481699 126481719 -13835046 + (A)n Simple_repeat Simple_repeat 1 20 0 194 255 0 0 chr10 126481870 126481921 -13834844 - MIR SINE MIR -96 112 62 240 302 23 45 chr10 126482609 126482854 -13833911 + G-rich Low_complexity Low_complexity 1 239 0 183 80 0 0 chr10 126482863 126482888 -13833877 + (CCG)n Simple_repeat Simple_repeat 1 25 0 28 61 0 0 chr10 126483010 126483059 -13833706 + GC_rich Low_complexity Low_complexity 1 49 0 205 241 9 52 chr10 126483167 126483283 -13833482 + (CGGGG)n Simple_repeat Simple_repeat 2 112 0 210 236 18 0 chr10 126483880 126483935 -13832830 - L2 LINE L2 -68 3204 3149 269 277 101 17 chr10 126484198 126484317 -13832448 - MIR SINE MIR -50 212 84 1990 132 0 4 chr10 126485965 126486246 -13830519 - AluSx SINE Alu -32 280 1 1769 170 0 26 chr10 126486378 126486684 -13830081 - AluJb SINE Alu -14 298 1 2463 93 0 0 chr10 126486897 126487209 -13829556 - AluSq SINE Alu -1 312 1 2469 61 0 3 chr10 126487592 126487885 -13828880 - AluSc SINE Alu -17 292 1 1923 149 7 0 chr10 126488180 126488469 -13828296 + AluSx SINE Alu 1 291 -21 1822 125 54 27 chr10 126488835 126489131 -13827634 - AluSq SINE Alu -7 306 3 2281 108 3 6 chr10 126489290 126489604 -13827161 - AluSq SINE Alu 0 313 1 787 192 154 7 chr10 126489620 126489832 -13826933 - MIR SINE MIR -17 245 13 185 250 188 16 chr10 126490671 126490735 -13826030 + L2 LINE L2 3194 3268 -4 749 145 8 46 chr10 126491300 126491431 -13825334 - FLAM_C SINE Alu -12 131 6 21 57 0 0 chr10 126492060 126492095 -13824670 + AT_rich Low_complexity Low_complexity 1 35 0 1342 97 0 6 chr10 126492649 126492825 -13823940 + AluSq SINE Alu 1 175 -138 830 153 0 36 chr10 126493131 126493268 -13823497 - FLAM_C SINE Alu -11 132 1 1869 130 31 24 chr10 126493638 126493931 -13822834 - AluJo SINE Alu -17 295 1 515 216 86 12 chr10 126494192 126494354 -13822411 + MER5B DNA MER1_type 1 174 -4 243 0 0 0 chr10 126495451 126495478 -13821287 + (CA)n Simple_repeat Simple_repeat 2 28 0 210 387 0 11 chr10 126495484 126495577 -13821188 - L2 LINE L2 -27 3245 3154 1720 181 10 13 chr10 126495700 126495999 -13820766 + AluJo SINE Alu 1 298 -14 1644 175 45 7 chr10 126496429 126496720 -13820045 - AluJb SINE Alu -10 302 1 256 280 60 0 chr10 126496725 126496875 -13819890 - L1MDa LINE L1 -3961 2579 2421 2354 90 0 16 chr10 126497331 126497642 -13819123 - AluSg SINE Alu -4 306 1 181 280 60 0 chr10 126498252 126498302 -13818463 - L2 LINE L2 -9 3263 3211 26 0 0 0 chr10 126498312 126498338 -13818427 + AT_rich Low_complexity Low_complexity 1 26 0 2262 117 0 0 chr10 126498338 126498636 -13818129 - AluSq SINE Alu -15 298 1 1696 126 53 21 chr10 126498640 126498925 -13817840 - AluSx SINE Alu -18 294 1 2251 91 0 11 chr10 126498937 126499265 -13817500 - AluSg1 SINE Alu 0 325 1 2140 107 4 0 chr10 126499520 126499801 -13816964 + AluSp SINE Alu 1 282 -31 195 42 0 0 chr10 126499805 126499829 -13816936 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 23 0 0 0 chr10 126500456 126500479 -13816286 + GC_rich Low_complexity Low_complexity 1 23 0 288 327 0 0 chr10 126500619 126500726 -13816039 + L1M4 LINE L1 2335 2441 -3705 302 262 127 0 chr10 126500870 126500996 -13815769 + MER112 DNA MER1_type 89 230 -30 1860 158 27 7 chr10 126501356 126501654 -13815111 - AluJo SINE Alu -8 304 1 239 119 0 51 chr10 126502113 126502172 -13814593 + (T)n Simple_repeat Simple_repeat 1 56 0 296 236 11 45 chr10 126502270 126502359 -13814406 - MER112 DNA MER1_type -144 116 31 2378 93 3 0 chr10 126502507 126502809 -13813956 - AluSg SINE Alu -7 303 1 2293 105 0 16 chr10 126503591 126503896 -13812869 - AluSx SINE Alu -12 300 1 2010 125 28 10 chr10 126504037 126504326 -13812439 - AluSx SINE Alu -18 294 1 24 0 0 0 chr10 126504330 126504354 -13812411 + AT_rich Low_complexity Low_complexity 1 24 0 419 278 139 31 chr10 126504366 126504690 -13812075 + L1ME4a LINE L1 5525 5883 -238 3916 173 185 7 chr10 126504732 126506184 -13810581 - MER52A LTR ERV1 0 1755 1 338 298 57 15 chr10 126506366 126506571 -13810194 + MIR SINE MIR 1 216 -46 1855 124 38 0 chr10 126506611 126506876 -13809889 - AluSx SINE Alu -37 275 1 797 201 30 50 chr10 126507152 126507351 -13809414 + MER105 DNA DNA 2 196 -8 199 313 21 0 chr10 126508111 126508159 -13808606 - L2 LINE L2 -86 3186 3138 709 178 0 0 chr10 126508619 126508737 -13808028 - FLAM_C SINE Alu -24 119 2 23 0 0 0 chr10 126508871 126508894 -13807871 + AT_rich Low_complexity Low_complexity 1 23 0 2427 102 0 0 chr10 126509110 126509415 -13807350 + AluSp SINE Alu 1 305 -8 386 194 194 101 chr10 126509584 126509821 -13806944 - L1ME3A LINE L1 -237 5933 5675 430 228 97 35 chr10 126510158 126510303 -13806462 - MLT1H LTR MaLR 0 549 396 2230 168 16 13 chr10 126511984 126512372 -13804393 - MLT1B LTR MaLR 0 390 2 254 264 139 42 chr10 126512563 126512683 -13804082 + MIR SINE MIR 105 243 -19 2363 108 0 0 chr10 126512683 126512990 -13803775 + AluSg SINE Alu 1 307 -3 254 264 139 42 chr10 126512990 126513013 -13803752 + MIR SINE MIR 243 262 0 2148 107 0 0 chr10 126513161 126513441 -13803324 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr10 126513444 126513468 -13803297 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 198 0 0 0 chr10 126513673 126513695 -13803070 + (A)n Simple_repeat Simple_repeat 1 22 0 2137 101 25 0 chr10 126513866 126514180 -13802585 - AluSx SINE Alu 0 321 1 2210 112 3 7 chr10 126514320 126514615 -13802150 + AluSx SINE Alu 1 294 -18 195 309 34 63 chr10 126514630 126514805 -13801960 + L2 LINE L2 3134 3303 -10 * 272 253 27 13 chr10 126514804 126514879 -13801886 - L2 LINE L2 -8 3264 3189 1021 158 6 18 chr10 126515970 126516134 -13800631 - AluJo SINE Alu -150 162 1 1618 108 131 15 chr10 126516208 126516468 -13800297 - AluSg1 SINE Alu -19 290 1 1156 134 0 6 chr10 126517105 126517277 -13799488 + FAM SINE Alu 1 171 -4 1457 165 0 16 chr10 126518742 126518985 -13797780 + MER8 DNA MER2_type 1 239 0 1869 190 3 3 chr10 126518996 126519322 -13797443 - MLT1A1 LTR MaLR -2 363 38 1187 148 34 29 chr10 126519393 126519602 -13797163 - MER2 DNA MER2_type -135 210 1 2304 203 17 19 chr10 126519645 126520109 -13796656 - MLT1A1-int LTR MaLR -6 1729 1267 305 238 0 0 chr10 126520225 126520288 -13796477 - MLT1A1-int LTR MaLR -994 741 679 3377 179 28 23 chr10 126520433 126521088 -13795677 - MLT1A1-int LTR MaLR -1073 662 5 219 36 0 0 chr10 126521157 126521185 -13795580 + (CA)n Simple_repeat Simple_repeat 1 28 0 2353 124 26 87 chr10 126521185 126521392 -13795373 + Tigger2a DNA MER2_type 3 221 -2487 2207 100 17 3 chr10 126521392 126521691 -13795074 - AluSq SINE Alu -10 303 1 2353 124 26 87 chr10 126521691 126521733 -13795032 + Tigger2a DNA MER2_type 221 264 -2444 2260 98 0 3 chr10 126521733 126522047 -13794718 - AluSq SINE Alu 0 313 1 2353 124 26 87 chr10 126522047 126522192 -13794573 + Tigger2a DNA MER2_type 264 370 -2338 1826 162 0 30 chr10 126522192 126522494 -13794271 - AluJb SINE Alu -19 293 1 2353 124 26 87 chr10 126522494 126522554 -13794211 + Tigger2a DNA MER2_type 370 432 -2 369 0 0 0 chr10 126522554 126522595 -13794170 + (TG)n Simple_repeat Simple_repeat 2 42 0 229 137 0 53 chr10 126522601 126522696 -13794069 + (TA)n Simple_repeat Simple_repeat 1 90 0 2633 136 100 0 chr10 126522757 126523177 -13793588 - MLT2B1 LTR ERVL -58 462 1 1136 274 175 24 chr10 126523252 126523628 -13793137 + L1MEc LINE L1 1285 1603 -4612 2281 119 0 3 chr10 126523628 126523938 -13792827 + AluSx SINE Alu 1 309 -3 1136 274 175 24 chr10 126523938 126524684 -13792081 + L1MEc LINE L1 1603 2547 -3668 1803 171 22 13 chr10 126525051 126525367 -13791398 + 7SLRNA srpRNA srpRNA 1 319 -1 24 0 0 0 chr10 126526083 126526107 -13790658 + AT_rich Low_complexity Low_complexity 1 24 0 811 186 0 0 chr10 126526107 126526236 -13790529 - FLAM_A SINE Alu -4 129 1 2627 143 38 80 chr10 126526237 126526761 -13790004 + MLT2B2 LTR ERVL 2 503 -12 25 31 0 0 chr10 126527713 126527745 -13789020 + AT_rich Low_complexity Low_complexity 1 32 0 2169 190 14 29 chr10 126527746 126528188 -13788577 - L1MB7 LINE L1 -20 6164 5730 24 0 0 0 chr10 126528197 126528221 -13788544 + AT_rich Low_complexity Low_complexity 1 24 0 432 0 0 0 chr10 126528650 126528698 -13788067 + (TA)n Simple_repeat Simple_repeat 2 49 0 2444 66 0 10 chr10 126528698 126528999 -13787766 - AluY SINE Alu -13 298 1 559 226 55 7 chr10 126529040 126529186 -13787579 - MER31B LTR ERV1 -43 423 271 257 293 112 49 chr10 126529191 126529552 -13787213 - L1MB7 LINE L1 -841 5305 4968 2264 98 0 20 chr10 126529552 126529849 -13786916 - AluSg SINE Alu -19 291 1 257 293 112 49 chr10 126529849 126529870 -13786895 - L1MB7 LINE L1 -1178 4968 4950 1747 184 0 0 chr10 126529870 126530158 -13786607 - AluJo SINE Alu -24 288 1 1010 202 31 0 chr10 126530160 126530353 -13786412 - L1PA16 LINE L1 -7 6159 5961 257 293 112 49 chr10 126530353 126530492 -13786273 - L1MB7 LINE L1 -1196 4950 4747 848 183 0 21 chr10 126530525 126530667 -13786098 - FRAM SINE Alu -36 140 2 23 0 0 0 chr10 126530758 126530781 -13785984 + AT_rich Low_complexity Low_complexity 1 23 0 2320 94 3 0 chr10 126530784 126531083 -13785682 + AluSc SINE Alu 1 300 -9 271 319 50 0 chr10 126531096 126531215 -13785550 - L1MB7 LINE L1 -1534 4612 4488 744 160 0 0 chr10 126531290 126531409 -13785356 - FLAM_C SINE Alu 0 143 25 1814 146 0 29 chr10 126532056 126532364 -13784401 - AluJb SINE Alu -13 299 1 274 200 24 47 chr10 126532498 126532583 -13784182 + L1MC5 LINE L1 7824 7906 -55 411 327 52 13 chr10 126532805 126532958 -13783807 - MIR SINE MIR -75 187 29 22 0 0 0 chr10 126533148 126533170 -13783595 + AT_rich Low_complexity Low_complexity 1 22 0 306 50 0 0 chr10 126533462 126533502 -13783263 + (TG)n Simple_repeat Simple_repeat 1 40 0 2024 161 0 0 chr10 126533546 126533850 -13782915 - AluJo SINE Alu -8 304 1 700 211 7 28 chr10 126533851 126533993 -13782772 - AluJo SINE Alu -172 140 2 1893 119 3 60 chr10 126534026 126534345 -13782420 + AluSg SINE Alu 1 301 -9 186 243 0 0 chr10 126534561 126534598 -13782167 + L2 LINE L2 3226 3262 -10 2094 141 0 3 chr10 126534794 126535107 -13781658 - AluSx SINE Alu 0 312 1 1678 211 78 56 chr10 126535407 126535923 -13780842 - L1MC4a LINE L1 -1331 6477 5951 2313 88 52 88 chr10 126535965 126536206 -13780559 - Tigger3(Golem) DNA MER2_type -238 2791 2570 1779 174 0 22 chr10 126536206 126536523 -13780242 - AluJo SINE Alu -2 310 1 2313 88 52 88 chr10 126536523 126536702 -13780063 - Tigger3(Golem) DNA MER2_type -459 2570 2386 1518 164 105 12 chr10 126536675 126536998 -13779767 - Tigger3(Golem) DNA MER2_type -879 2150 1 * 23 22 0 44 chr10 126537072 126537092 -13779673 + AT_rich Low_complexity Low_complexity 1 20 -23 1785 175 0 7 chr10 126537092 126537389 -13779376 + AluJb SINE Alu 1 295 -17 23 22 0 44 chr10 126537389 126537413 -13779352 + AT_rich Low_complexity Low_complexity 20 43 0 2202 153 18 9 chr10 126537430 126537771 -13778994 - MER2 DNA MER2_type 0 344 1 1860 205 79 32 chr10 126537807 126538365 -13778400 - L1MC4a LINE L1 -351 5815 5283 195 295 66 0 chr10 126539035 126539096 -13777669 - MIR3 SINE MIR -46 162 98 245 299 52 114 chr10 126539258 126539348 -13777417 - MIR SINE MIR -31 231 137 616 148 130 9 chr10 126539348 126539463 -13777302 + FLAM_C SINE Alu 1 129 -4 245 299 52 114 chr10 126539463 126539583 -13777182 - MIR SINE MIR -125 137 34 3086 161 20 27 chr10 126541500 126542084 -13774681 - L1MB8 LINE L1 -23 6155 5576 1889 87 0 16 chr10 126542084 126542338 -13774427 - AluY SINE Alu -8 303 54 486 0 0 0 chr10 126542338 126542392 -13774373 + (GA)n Simple_repeat Simple_repeat 1 54 0 1742 161 0 18 chr10 126542406 126542691 -13774074 + AluJo SINE Alu 21 300 -12 1374 160 153 34 chr10 126543370 126543632 -13773133 - AluJo SINE Alu -9 293 1 1141 228 64 16 chr10 126543726 126544038 -13772727 - MER46C DNA MER2_type 0 338 12 1942 145 25 0 chr10 126544119 126544402 -13772363 + AluSx SINE Alu 7 296 -16 337 168 0 32 chr10 126544402 126544497 -13772268 + GA-rich Low_complexity Low_complexity 1 92 0 584 331 128 14 chr10 126544878 126545307 -13771458 - L2 LINE L2 -832 2482 2005 2386 90 3 0 chr10 126545754 126546054 -13770711 + AluSp SINE Alu 1 301 -12 988 229 200 45 chr10 126546424 126547044 -13769721 - L2 LINE L2 -961 2353 1638 198 0 0 0 chr10 126549377 126549399 -13767366 + (T)n Simple_repeat Simple_repeat 1 22 0 281 133 0 0 chr10 126549594 126549639 -13767126 - L2 LINE L2 0 3313 3269 405 0 0 0 chr10 126550204 126550249 -13766516 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1965 122 16 7 chr10 126550451 126550755 -13766010 - AluSx SINE Alu -5 307 1 198 0 0 0 chr10 126550803 126550825 -13765940 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 6391 23 1 7 chr10 126550835 126551544 -13765221 - SVA Other Other -8 1378 674 304 269 32 31 chr10 126551870 126552048 -13764717 + A-rich Low_complexity Low_complexity 1 178 0 5634 69 23 65 chr10 126552342 126553539 -13763226 - SVA Other Other -518 868 7 628 244 153 5 chr10 126553739 126553948 -13762817 - MIR SINE MIR -1 261 22 926 133 0 15 chr10 126556219 126556354 -13760411 - FLAM_A SINE Alu 0 133 1 369 250 0 18 chr10 126556833 126556945 -13759820 + L1ME LINE L1 4488 4597 -1549 238 310 112 0 chr10 126557039 126557155 -13759610 + L1ME LINE L1 5523 5651 -519 * 421 204 125 9 chr10 126557141 126557286 -13759479 + L1MC4a LINE L1 4954 5113 -1033 43 64 0 0 chr10 126557435 126557513 -13759252 + AT_rich Low_complexity Low_complexity 1 78 0 425 248 63 38 chr10 126557536 126557696 -13759069 + L1MC4a LINE L1 5124 5278 -892 2157 110 13 19 chr10 126557696 126558004 -13758761 + AluSg SINE Alu 2 307 -3 425 248 63 38 chr10 126558004 126558169 -13758596 + L1MC4a LINE L1 5278 5481 -689 1381 163 9 0 chr10 126558175 126558390 -13758375 + AluSg/x SINE Alu 87 303 -9 247 204 0 0 chr10 126558398 126558442 -13758323 + L1MC4a LINE L1 5486 5529 -637 264 317 132 26 chr10 126558470 126558697 -13758068 + L1MC4a LINE L1 5664 5914 -1894 1125 181 0 15 chr10 126558986 126559191 -13757574 + AluJb SINE Alu 109 310 -2 973 207 78 96 chr10 126559438 126559825 -13756940 + MLT1L LTR MaLR 145 524 -91 298 237 87 135 chr10 126559977 126560445 -13756320 - L1MC/D LINE L1 -348 5773 5327 759 296 89 47 chr10 126560698 126561364 -13755401 - L1MC/D LINE L1 -1133 5013 4320 2007 107 7 23 chr10 126562149 126562448 -13754317 - AluSx SINE Alu -18 294 1 275 284 179 31 chr10 126563498 126563660 -13753105 + MIR SINE MIR 47 232 -30 22 70 0 0 chr10 126563737 126563780 -13752985 + AT_rich Low_complexity Low_complexity 1 43 0 305 102 0 0 chr10 126564229 126564278 -13752487 - Alu SINE Alu -2 298 250 324 204 175 19 chr10 126564307 126564410 -13752355 - LTR50 LTR ERVL -590 205 87 1933 124 22 32 chr10 126564410 126564724 -13752041 + AluSx SINE Alu 1 311 -1 577 293 19 28 chr10 126564793 126565005 -13751760 + MIR SINE MIR 37 246 -16 336 212 15 0 chr10 126565714 126565780 -13750985 - Charlie8 DNA MER1_type -2244 173 107 735 219 107 15 chr10 126565854 126566050 -13750715 + MIR SINE MIR 49 262 0 2254 101 3 13 chr10 126566363 126566669 -13750096 + AluSx SINE Alu 1 303 -9 1078 191 150 10 chr10 126568819 126569113 -13747652 - L1M4 LINE L1 -801 5345 5011 446 120 74 65 chr10 126569511 126569619 -13747146 + MER96B DNA MER1_type? 17 125 -292 21 0 0 0 chr10 126570762 126570783 -13745982 + AT_rich Low_complexity Low_complexity 1 21 0 1487 186 81 3 chr10 126570790 126571075 -13745690 + AluJo SINE Alu 6 312 0 776 192 0 0 chr10 126571135 126571260 -13745505 + FLAM_C SINE Alu 1 125 -8 2098 108 11 0 chr10 126571530 126571838 -13744927 + AluSg SINE Alu 1 311 0 2405 74 3 0 chr10 126572288 126572585 -13744180 - AluY SINE Alu -13 298 1 4169 169 43 35 chr10 126574249 126575117 -13741648 - L1MB7 LINE L1 -10 6174 5300 545 217 72 36 chr10 126575195 126575361 -13741404 + MER96B DNA MER1_type? 242 413 -4 201 94 0 0 chr10 126576201 126576233 -13740532 + (CGGA)n Simple_repeat Simple_repeat 3 34 0 225 0 0 0 chr10 126576639 126576664 -13740101 + (T)n Simple_repeat Simple_repeat 1 25 0 209 356 0 0 chr10 126579776 126579835 -13736930 + L2 LINE L2 3171 3229 -43 2400 247 62 16 chr10 126580352 126581088 -13735677 - L1MC4a LINE L1 -5 7803 7034 264 222 303 0 chr10 126581249 126581348 -13735417 + MIR SINE MIR 16 144 -118 854 214 158 21 chr10 126582461 126582746 -13734019 + MER33 DNA MER1_type 1 324 0 1368 132 189 8 chr10 126584881 126585124 -13731641 + AluJb SINE Alu 1 287 -25 24 91 0 0 chr10 126587474 126587540 -13729225 + AT_rich Low_complexity Low_complexity 1 66 0 3046 216 107 59 chr10 126588628 126589631 -13727134 + L1M4 LINE L1 2 1052 -5490 1206 164 40 132 chr10 126589633 126589937 -13726828 + AluJo SINE Alu 1 276 -36 3122 234 92 49 chr10 126589950 126590807 -13725958 + L1M4 LINE L1 1042 1860 -4965 1755 148 0 67 chr10 126590807 126590925 -13725840 + AluJb SINE Alu 1 125 -187 192 40 0 0 chr10 126590925 126590950 -13725815 + (CA)n Simple_repeat Simple_repeat 1 25 0 1755 148 0 67 chr10 126590950 126591162 -13725603 + AluJb SINE Alu 125 309 -3 3122 234 92 49 chr10 126591162 126591787 -13724978 + L1M4 LINE L1 1860 2725 -4100 1747 168 17 0 chr10 126592113 126592405 -13724360 - AluJb SINE Alu -13 299 3 333 0 0 0 chr10 126593031 126593068 -13723697 + (T)n Simple_repeat Simple_repeat 1 37 0 1333 67 6 0 chr10 126593906 126594071 -13722694 + AluY SINE Alu 131 296 -15 888 111 8 0 chr10 126594163 126594280 -13722485 + FLAM_C SINE Alu 1 118 -15 185 59 98 29 chr10 126594490 126594592 -13722173 + (TA)n Simple_repeat Simple_repeat 2 110 0 304 296 0 25 chr10 126595847 126595928 -13720837 + Charlie1 DNA MER1_type 1 79 -2682 * 2177 194 104 14 chr10 126595919 126596486 -13720279 + Charlie1 DNA MER1_type 2144 2761 0 695 249 71 43 chr10 126597387 126597640 -13719125 - MIR SINE MIR -2 260 1 613 254 173 12 chr10 126597663 126597986 -13718779 + L1ME4a LINE L1 5678 6052 -69 2176 123 55 19 chr10 126598190 126598515 -13718250 + MER1B DNA MER1_type 1 337 0 2063 109 42 0 chr10 126599042 126599327 -13717438 - AluSq SINE Alu -16 297 1 2374 99 3 0 chr10 126599933 126600236 -13716529 - AluSx SINE Alu -8 304 1 486 188 339 16 chr10 126600660 126600846 -13715919 - MIR SINE MIR -1 261 16 2193 88 53 170 chr10 126600848 126601361 -13715404 + MLT2A2 LTR ERVL 1 453 0 3262 207 250 63 chr10 126601644 126603044 -13713721 + L1MC4 LINE L1 5812 7425 -383 693 163 0 32 chr10 126603062 126603185 -13713580 + MLT1A1 LTR MaLR 194 312 -53 251 157 98 0 chr10 126603195 126603246 -13713519 + L1MC4a LINE L1 7479 7534 -274 * 626 238 102 38 chr10 126603213 126603448 -13713317 + L1MC4a LINE L1 6338 6587 -1221 976 251 38 26 chr10 126603514 126603857 -13712908 + L1MC4 LINE L1 7694 8040 -2 25 0 0 0 chr10 126604105 126604130 -13712635 + AT_rich Low_complexity Low_complexity 1 25 0 2015 130 6 22 chr10 126604606 126604921 -13711844 + AluSx SINE Alu 3 312 0 1370 199 130 49 chr10 126605219 126605627 -13711138 + MLT1D LTR MaLR 65 505 0 220 330 52 17 chr10 126606262 126606377 -13710388 - L2 LINE L2 -4 3309 3191 1519 203 58 21 chr10 126606379 126606741 -13710024 + L1MD2 LINE L1 5756 6011 -167 2350 100 3 0 chr10 126606742 126607052 -13709713 + AluSp SINE Alu 1 311 -2 1660 188 3 25 chr10 126607263 126607582 -13709183 + AluJb SINE Alu 1 312 0 589 303 73 28 chr10 126608199 126608516 -13708249 + L1MEc LINE L1 360 690 -6031 834 161 103 203 chr10 126608793 126608904 -13707861 + AluJo SINE Alu 5 125 -198 1920 162 7 3 chr10 126608904 126609213 -13707552 - AluJb SINE Alu -2 310 1 834 161 103 203 chr10 126609213 126609451 -13707314 + AluJo SINE Alu 125 323 0 230 253 0 60 chr10 126609455 126609538 -13707227 + L1MEc LINE L1 1914 1991 -4549 2251 104 10 7 chr10 126609549 126609857 -13706908 + AluSc SINE Alu 1 309 0 332 269 66 30 chr10 126609894 126610061 -13706704 + L1MEc LINE L1 2134 2306 -4415 1093 214 66 52 chr10 126610066 126610264 -13706501 + L1MEc LINE L1 3285 3479 -3061 2135 95 3 20 chr10 126610264 126610558 -13706207 + AluSg SINE Alu 1 289 -21 1093 214 66 52 chr10 126610558 126610833 -13705932 + L1MEc LINE L1 3479 3749 -2791 2107 97 4 0 chr10 126610833 126611102 -13705663 + AluSc SINE Alu 17 286 -23 194 0 39 0 chr10 126611105 126611131 -13705634 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1093 214 66 52 chr10 126611131 126611185 -13705580 + L1MEc LINE L1 3750 3924 -2616 935 246 143 18 chr10 126611177 126611563 -13705202 + L1ME2 LINE L1 5721 6154 -10 * 1761 148 11 0 chr10 126611726 126611996 -13704769 + AluJb SINE Alu 34 306 -6 270 0 0 0 chr10 126614150 126614180 -13702585 + (CA)n Simple_repeat Simple_repeat 2 31 0 1229 224 177 53 chr10 126615192 126615854 -13700911 - L1MC4 LINE L1 -2 8040 7297 182 154 103 0 chr10 126616151 126616190 -13700575 - MER5B DNA MER1_type -134 44 2 1026 185 11 26 chr10 126616197 126616386 -13700379 + MER5A DNA MER1_type 4 189 0 1444 143 0 42 chr10 126616618 126616877 -13699888 - AluJo SINE Alu -19 293 46 2163 107 0 4 chr10 126616900 126617181 -13699584 + AluSx SINE Alu 1 280 -32 456 253 95 38 chr10 126617232 126617390 -13699375 + MER68 LTR ERV1 396 562 0 1909 215 83 34 chr10 126617394 126618316 -13698449 - L1ME1 LINE L1 -332 5834 4857 2494 65 10 0 chr10 126618325 126618634 -13698131 + AluSx SINE Alu 1 312 0 435 163 62 0 chr10 126618653 126618733 -13698032 + L1MB4 LINE L1 5844 5928 -252 1654 196 91 50 chr10 126618750 126619235 -13697530 + MLT1D LTR MaLR 1 505 0 2163 210 185 56 chr10 126619240 126620155 -13696610 - L1ME1 LINE L1 -2734 3412 2380 1550 127 5 0 chr10 126620185 126620397 -13696368 + AluSx SINE Alu 1 213 -99 2944 168 34 31 chr10 126620397 126620669 -13696096 + L1MB7 LINE L1 5550 5820 -364 1728 153 0 51 chr10 126620669 126620983 -13695782 + AluJo SINE Alu 1 298 -14 2944 168 34 31 chr10 126620983 126621219 -13695546 + L1MB7 LINE L1 5820 6063 -121 2316 107 0 0 chr10 126621219 126621517 -13695248 + AluSx SINE Alu 1 298 -14 2944 168 34 31 chr10 126621517 126621620 -13695145 + L1MB7 LINE L1 6063 6164 -20 1505 114 5 5 chr10 126621638 126621849 -13694916 + AluSg/x SINE Alu 83 293 -19 2263 97 0 6 chr10 126621886 126622197 -13694568 + AluSg SINE Alu 1 309 -1 435 284 65 35 chr10 126622710 126622879 -13693886 + MER97b DNA MER1_type? 1 174 -879 2014 141 0 3 chr10 126623018 126623322 -13693443 + AluSx SINE Alu 1 303 -9 419 298 168 49 chr10 126623392 126624031 -13692734 - L2 LINE L2 -5 3267 2561 2096 108 42 20 chr10 126624039 126624167 -13692598 + AluSq SINE Alu 1 125 -188 2197 123 0 0 chr10 126624167 126624460 -13692305 + AluSg SINE Alu 1 293 -17 2096 108 42 20 chr10 126624460 126624637 -13692128 + AluSq SINE Alu 125 313 0 966 168 95 0 chr10 126624752 126624942 -13691823 + MER3 DNA MER1_type 1 208 -1 2325 66 7 3 chr10 126625043 126625332 -13691433 + AluSc SINE Alu 2 291 -18 325 285 103 78 chr10 126627062 126627513 -13689252 + L1M2 LINE L1 555 897 -5952 23 0 0 0 chr10 126627513 126627536 -13689229 + GC_rich Low_complexity Low_complexity 1 23 0 325 285 103 78 chr10 126627536 126627589 -13689176 + L1M2 LINE L1 897 947 -5902 232 169 26 26 chr10 126627770 126627847 -13688918 + (CGCGG)n Simple_repeat Simple_repeat 5 81 0 283 128 43 0 chr10 126628524 126628571 -13688194 + MER57A LTR ERV1 288 336 -67 1354 200 143 0 chr10 126628764 126629216 -13687549 - MER34B LTR ERV1 0 565 127 2155 113 29 63 chr10 126629216 126629297 -13687468 - MER47A DNA MER2_type -1957 366 284 2303 89 0 0 chr10 126629297 126629588 -13687177 + AluSc SINE Alu 1 291 -18 2155 113 29 63 chr10 126629588 126629885 -13686880 - MER47A DNA MER2_type -2039 284 1 1354 200 143 0 chr10 126629885 126629995 -13686770 - MER34B LTR ERV1 -438 127 36 968 202 108 62 chr10 126630313 126630803 -13685962 - MER39 LTR ERV1 0 707 2 977 180 0 0 chr10 126630987 126631148 -13685617 + FRAM SINE Alu 1 161 -5 2236 99 0 13 chr10 126631330 126631642 -13685123 + AluY SINE Alu 1 308 -3 245 271 29 0 chr10 126631661 126631731 -13685034 - L2 LINE L2 -58 3255 3184 1352 173 43 151 chr10 126631824 126632200 -13684565 + MSTD LTR MaLR 1 323 -73 2318 84 3 0 chr10 126632200 126632487 -13684278 - AluSp SINE Alu -25 288 1 1352 173 43 151 chr10 126632487 126632554 -13684211 + MSTD LTR MaLR 323 396 0 903 226 39 69 chr10 126632639 126633046 -13683719 + HAL1 LINE L1 2001 2395 -112 399 268 49 8 chr10 126633113 126633236 -13683529 + L2 LINE L2 3184 3311 -2 429 333 45 20 chr10 126633241 126633442 -13683323 - HAL1 LINE L1 -523 1984 1779 355 312 0 0 chr10 126633574 126633667 -13683098 + MLT1J LTR MaLR 104 196 -315 739 177 31 0 chr10 126633669 126633799 -13682966 - FLAM_C SINE Alu -8 135 2 377 157 14 0 chr10 126634062 126634132 -13682633 - MER92C LTR ERV1 0 554 484 341 296 0 11 chr10 126634232 126634320 -13682445 - MER92C LTR ERV1 -438 116 30 303 235 37 12 chr10 126634311 126634392 -13682373 - MER89 LTR ERV1 -280 279 197 * 353 119 0 178 chr10 126634367 126634426 -13682339 - MER89 LTR ERV1 -472 87 52 1833 153 39 0 chr10 126634426 126634708 -13682057 + AluJb SINE Alu 2 294 -18 353 119 0 178 chr10 126634708 126634749 -13682016 - MER89 LTR ERV1 -507 52 5 324 217 12 0 chr10 126634752 126634835 -13681930 - MER33 DNA MER1_type -13 311 228 1405 117 0 19 chr10 126634835 126635040 -13681725 - AluSg/x SINE Alu -11 301 101 408 94 0 0 chr10 126635040 126635093 -13681672 - Alu SINE Alu -259 54 2 957 185 36 17 chr10 126635096 126635333 -13681432 - MER33 DNA MER1_type -91 233 1 1031 184 69 28 chr10 126635625 126635843 -13680922 + AluJb SINE Alu 85 311 -1 2272 114 10 0 chr10 126635945 126636244 -13680521 - AluSx SINE Alu -10 302 1 1823 149 55 0 chr10 126636260 126636413 -13680352 - AluJb SINE Alu -22 290 147 192 77 0 0 chr10 126636413 126636439 -13680326 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1823 149 55 0 chr10 126636439 126636560 -13680205 - AluJb SINE Alu -165 147 1 2241 128 40 90 chr10 126636616 126636767 -13679998 - MSTB LTR MaLR 0 426 269 2478 75 0 28 chr10 126636767 126637087 -13679678 + AluY SINE Alu 1 311 0 2241 128 40 90 chr10 126637087 126637185 -13679580 - MSTB LTR MaLR -157 269 168 2093 66 66 4 chr10 126637185 126637456 -13679309 - AluY SINE Alu -1 310 23 2241 128 40 90 chr10 126637456 126637650 -13679115 - MSTB LTR MaLR -258 168 4 269 311 56 0 chr10 126638179 126638269 -13678496 + MLT1J LTR MaLR 103 197 -314 433 178 0 0 chr10 126638489 126638562 -13678203 + MER67D LTR ERV1 87 159 -355 1472 93 5 0 chr10 126638563 126638757 -13678008 + LTR12 LTR ERV1 80 274 -440 346 263 10 0 chr10 126638761 126638860 -13677905 + LTR30 LTR ERV1 544 643 -79 28883 104 22 10 chr10 126638860 126643756 -13673009 + Harlequin LTR ERV1 1 4944 -2001 2194 180 112 54 chr10 126643768 126644537 -13672228 + Harlequin LTR ERV1 843 1720 -5176 * 4704 102 5 0 chr10 126644532 126645172 -13671593 + Harlequin LTR ERV1 7757 8399 0 279 231 0 0 chr10 126645172 126645224 -13671541 + LTR30 LTR ERV1 1 52 -670 1441 97 14 142 chr10 126645224 126645539 -13671226 + LTR12 LTR ERV1 57 2032 -406 320 239 34 0 chr10 126645540 126645628 -13671137 + LTR30 LTR ERV1 553 643 -79 755 90 0 0 chr10 126645630 126645730 -13671035 + LTR12 LTR ERV1 615 714 0 323 214 198 43 chr10 126645732 126645919 -13670846 + MER67C LTR ERV1 188 403 -307 * 414 249 31 6 chr10 126645888 126646103 -13670662 + MER67D LTR ERV1 273 528 -15 1412 148 102 14 chr10 126646404 126646687 -13670078 - AluJb SINE Alu -2 310 3 2183 96 10 19 chr10 126646715 126647029 -13669736 + AluY SINE Alu 1 311 0 2311 81 0 0 chr10 126648386 126648669 -13668096 - AluSx SINE Alu -8 304 22 538 212 201 0 chr10 126648838 126649027 -13667738 + MIR SINE MIR 8 234 -28 525 265 103 27 chr10 126649275 126649460 -13667305 + L2 LINE L2 3114 3312 -1 345 24 0 0 chr10 126649763 126649805 -13666960 + (TG)n Simple_repeat Simple_repeat 1 42 0 2087 104 28 7 chr10 126649970 126650257 -13666508 + AluSx SINE Alu 1 293 -19 257 217 121 12 chr10 126650258 126650341 -13666424 - L2 LINE L2 -14 3299 3208 182 283 50 0 chr10 126650815 126650875 -13665890 - L2 LINE L2 -557 2757 2695 234 314 51 34 chr10 126651058 126651176 -13665589 + L2 LINE L2 3190 3309 -4 322 322 54 48 chr10 126651184 126651498 -13665267 - L2 LINE L2 -814 2500 2185 2379 89 0 22 chr10 126652584 126652900 -13663865 + AluSx SINE Alu 1 309 -3 228 205 68 87 chr10 126652950 126653111 -13663654 + L1ME4a LINE L1 5927 6084 -37 383 232 48 82 chr10 126654663 126654816 -13661949 - L1MD3 LINE L1 0 8029 7881 190 232 12 24 chr10 126654832 126654914 -13661851 + C-rich Low_complexity Low_complexity 2 82 0 420 294 29 12 chr10 126654923 126655093 -13661672 - L1MC4 LINE L1 -119 7923 7751 303 203 0 0 chr10 126655116 126655180 -13661585 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1702 178 0 11 chr10 126655183 126655459 -13661306 - AluJo SINE Alu -19 293 21 983 150 0 13 chr10 126655470 126655623 -13661142 - FRAM SINE Alu -23 153 3 22 0 0 0 chr10 126655638 126655660 -13661105 + AT_rich Low_complexity Low_complexity 1 22 0 1353 186 75 34 chr10 126655873 126656168 -13660597 - AluJo SINE Alu 0 312 6 21 57 0 0 chr10 126656181 126656216 -13660549 + AT_rich Low_complexity Low_complexity 1 35 0 363 105 0 195 chr10 126656381 126656499 -13660266 - L1ME1 LINE L1 0 6178 6077 1855 98 18 14 chr10 126656546 126656822 -13659943 - AluSx SINE Alu -1 311 35 331 268 8 31 chr10 126656936 126657063 -13659702 + CT-rich Low_complexity Low_complexity 4 127 0 1954 122 39 0 chr10 126657242 126657528 -13659237 + AluSp SINE Alu 1 297 -16 966 76 0 42 chr10 126657648 126657792 -13658973 - L1MA3 LINE L1 0 6305 6168 347 244 47 8 chr10 126658532 126658659 -13658106 - MER103 DNA DNA -1 165 34 1944 134 17 3 chr10 126658896 126659186 -13657579 - AluSx SINE Alu -17 295 2 1778 168 0 7 chr10 126660018 126660315 -13656450 + AluJb SINE Alu 1 295 -17 195 204 0 0 chr10 126660316 126660360 -13656405 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 561 252 80 73 chr10 126660853 126661161 -13655604 + L1M4 LINE L1 4202 4517 -1629 2046 144 0 19 chr10 126661161 126661473 -13655292 + AluJb SINE Alu 1 306 -6 561 252 80 73 chr10 126661473 126661711 -13655054 + L1M4 LINE L1 4517 4752 -1394 1930 133 7 13 chr10 126661746 126662047 -13654718 - AluSx SINE Alu -13 299 1 2184 117 7 0 chr10 126662187 126662478 -13654287 + AluSx SINE Alu 1 293 -19 359 191 44 15 chr10 126662750 126662818 -13653947 - MER2 DNA MER2_type -3 342 273 2169 125 0 3 chr10 126662840 126663143 -13653622 + AluSx SINE Alu 1 302 -10 1007 201 20 0 chr10 126663144 126663343 -13653422 - MER2 DNA MER2_type -141 204 2 2004 177 88 26 chr10 126663534 126663975 -13652790 + MLT1C LTR MaLR 1 427 -1 1213 179 88 21 chr10 126664532 126664772 -13651993 + AluJb SINE Alu 37 292 -20 1718 168 39 0 chr10 126664786 126665072 -13651693 + AluJo SINE Alu 1 297 -15 962 236 39 0 chr10 126665166 126665374 -13651391 - MER58A DNA MER1_type 0 224 9 234 282 162 26 chr10 126665514 126665631 -13651134 + MIR SINE MIR 103 235 -27 1835 146 7 17 chr10 126665854 126666156 -13650609 - AluJo SINE Alu -13 299 1 21 57 0 0 chr10 126666200 126666235 -13650530 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr10 126666438 126666466 -13650299 + AT_rich Low_complexity Low_complexity 1 28 0 817 145 0 15 chr10 126666466 126666597 -13650168 - FLAM_C SINE Alu -4 129 1 1972 167 3 0 chr10 126666640 126666946 -13649819 - AluJb SINE Alu -5 307 1 1003 163 0 0 chr10 126667451 126667604 -13649161 - AluJo SINE Alu -159 153 1 2022 149 34 60 chr10 126667638 126667802 -13648963 - L1MA4 LINE L1 0 6300 6133 2385 101 0 0 chr10 126667802 126668108 -13648657 - AluSx SINE Alu -2 310 5 2022 149 34 60 chr10 126668108 126668359 -13648406 - L1MA4 LINE L1 -167 6133 5896 746 214 39 7 chr10 126668514 126668668 -13648097 - MER58B DNA MER1_type -2 339 181 2175 116 3 0 chr10 126668668 126668962 -13647803 - AluSx SINE Alu -17 295 1 218 288 0 0 chr10 126669538 126669611 -13647154 + C-rich Low_complexity Low_complexity 1 73 0 1146 92 65 32 chr10 126669762 126669979 -13646786 + AluY SINE Alu 1 224 -87 462 310 56 13 chr10 126670726 126670958 -13645807 + MIR SINE MIR 21 262 0 187 296 0 0 chr10 126672337 126672391 -13644374 - MIR SINE MIR -3 259 206 255 290 0 0 chr10 126672533 126672595 -13644170 + L1ME4a LINE L1 5990 6051 -70 198 0 0 0 chr10 126673369 126673391 -13643374 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1080 137 39 15 chr10 126673537 126673833 -13642932 - L1P5 LINE L1 -703 5451 5148 32 26 0 0 chr10 126674421 126674460 -13642305 + AT_rich Low_complexity Low_complexity 1 39 0 1642 217 62 53 chr10 126674553 126675067 -13641698 + MER39 LTR ERV1 1 698 -9 611 241 115 55 chr10 126676036 126676289 -13640476 + MER46C DNA MER2_type 1 268 -70 1721 209 66 27 chr10 126676304 126676745 -13640020 + MLT1C LTR MaLR 3 460 -7 758 278 47 5 chr10 126676900 126677112 -13639653 + MLT1K LTR MaLR 35 255 -333 876 215 111 97 chr10 126677206 126677504 -13639261 + MLT1K LTR MaLR 281 582 -6 180 234 0 21 chr10 126678113 126678160 -13638605 + L3 LINE CR1 1338 1383 -194 2100 122 0 16 chr10 126678184 126678488 -13638277 + AluSg1 SINE Alu 1 299 -10 827 150 140 35 chr10 126678488 126678688 -13638077 + L1MB7 LINE L1 5964 6184 0 441 0 0 0 chr10 126679413 126679462 -13637303 + (CA)n Simple_repeat Simple_repeat 2 50 0 826 172 16 0 chr10 126679506 126679634 -13637131 + MER2 DNA MER2_type 2 131 -214 2737 112 79 18 chr10 126679635 126680006 -13636759 - Tigger1 DNA MER2_type -1 2417 2013 2366 88 3 10 chr10 126680006 126680312 -13636453 + AluSp SINE Alu 1 304 -9 2737 112 79 18 chr10 126680312 126680385 -13636380 - Tigger1 DNA MER2_type -405 2013 1946 1710 230 60 39 chr10 126680637 126681102 -13635663 + MER77 LTR ERV1 57 531 -74 21 0 0 0 chr10 126681174 126681195 -13635570 + AT_rich Low_complexity Low_complexity 1 21 0 241 43 43 43 chr10 126681521 126681568 -13635197 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 240 208 0 0 chr10 126681786 126681839 -13634926 - MLT1J LTR MaLR -33 478 426 2142 104 0 0 chr10 126682028 126682329 -13634436 - AluSc SINE Alu 0 301 1 202 319 44 0 chr10 126683592 126683683 -13633082 + MIR SINE MIR 168 262 0 196 309 11 43 chr10 126683712 126683806 -13632959 + MER5B DNA MER1_type 24 114 -64 1573 168 88 9 chr10 126684076 126684416 -13632349 - LOR1b LTR ERV1 0 461 95 1755 132 0 45 chr10 126686286 126686573 -13630192 - AluSx SINE Alu -38 274 1 526 291 125 30 chr10 126686585 126686984 -13629781 + L1ME3 LINE L1 5525 5961 -201 350 241 25 0 chr10 126687076 126687155 -13629610 + 5S rRNA rRNA 4 84 -37 2363 106 0 3 chr10 126687207 126687518 -13629247 - AluSg SINE Alu 0 310 1 369 43 0 0 chr10 126687854 126687901 -13628864 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 1792 89 58 12 chr10 126690143 126690400 -13626365 - AluSx SINE Alu -43 269 1 1150 239 11 28 chr10 126690400 126690764 -13626001 - L1M4 LINE L1 -1675 4471 4114 269 282 57 24 chr10 126691366 126691490 -13625275 + LTR33 LTR ERVL 394 521 0 200 238 0 0 chr10 126693039 126693081 -13623684 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 126693357 126693378 -13623387 + (T)n Simple_repeat Simple_repeat 1 21 0 1518 165 0 55 chr10 126693543 126693816 -13622949 - AluJb SINE Alu -54 258 1 1641 117 25 4 chr10 126693817 126694056 -13622709 + MER4B LTR ERV1 349 592 -18 661 100 0 11 chr10 126694042 126694132 -13622633 + MER4B LTR ERV1 522 610 0 * 1147 167 15 20 chr10 126694132 126694330 -13622435 + LTR32 LTR ERVL 164 360 -111 870 205 0 6 chr10 126694403 126694559 -13622206 + LTR32 LTR ERVL 317 471 0 1932 159 88 0 chr10 126694606 126694945 -13621820 + MER68 LTR ERV1 135 503 -59 767 199 110 4 chr10 126695076 126695312 -13621453 + MER97a DNA MER1_type? 634 894 0 1711 157 4 0 chr10 126695395 126695650 -13621115 - AluJb SINE Alu -28 284 29 415 182 2 13 chr10 126695696 126695786 -13620979 - L1ME2 LINE L1 -264 5900 5811 240 143 0 0 chr10 126696035 126696077 -13620688 + (CA)n Simple_repeat Simple_repeat 2 43 0 1074 240 4 26 chr10 126696089 126696356 -13620409 - MLT2B1 LTR ERVL -258 262 2 1960 135 3 7 chr10 126696356 126696644 -13620121 + AluSx SINE Alu 1 287 -25 791 152 15 26 chr10 126696792 126697058 -13619707 + CT-rich Low_complexity Low_complexity 1 263 0 1578 182 34 17 chr10 126697058 126697355 -13619410 - AluJo SINE Alu -6 306 5 627 258 124 50 chr10 126698003 126698218 -13618547 - L2 LINE L2 0 3313 3115 1966 155 24 0 chr10 126698218 126698515 -13618250 + AluJo SINE Alu 1 304 -8 627 258 124 50 chr10 126698515 126698905 -13617860 - L2 LINE L2 -198 3115 2658 1184 210 111 58 chr10 126698905 126699301 -13617464 - LTR16A LTR ERVL 0 450 34 614 244 41 0 chr10 126699335 126699532 -13617233 - L2 LINE L2 -656 2658 2454 1852 140 3 14 chr10 126699798 126700084 -13616681 + AluJo SINE Alu 4 286 -26 239 348 58 7 chr10 126700358 126700496 -13616269 - MIR SINE MIR -45 217 73 517 237 124 10 chr10 126700751 126700945 -13615820 + MIR SINE MIR 47 262 0 2119 99 3 71 chr10 126701088 126701411 -13615354 + AluSx SINE Alu 1 301 -11 217 205 0 0 chr10 126701478 126701517 -13615248 + GA-rich Low_complexity Low_complexity 3 41 0 2453 52 16 10 chr10 126702198 126702507 -13614258 + AluY SINE Alu 1 311 0 2124 132 0 3 chr10 126702695 126702998 -13613767 - AluSx SINE Alu -10 302 1 306 268 98 0 chr10 126703394 126703517 -13613248 + MIR SINE MIR 114 248 -14 364 123 6 18 chr10 126703738 126703805 -13612960 - L1M3 LINE L1 -472 5696 5628 908 200 82 20 chr10 126704278 126704533 -13612232 + L1MC4a LINE L1 5693 5963 -1845 563 301 52 78 chr10 126705559 126705853 -13610912 + L1M4 LINE L1 2236 2536 -3610 872 126 0 30 chr10 126705853 126705988 -13610777 + FLAM_C SINE Alu 1 131 -2 563 301 52 78 chr10 126705988 126706329 -13610436 + L1M4 LINE L1 2536 2884 -3262 1858 243 89 40 chr10 126706329 126706926 -13609839 + MLT1E2 LTR MaLR 1 626 0 563 301 52 78 chr10 126706926 126707011 -13609754 + L1M4 LINE L1 2884 2970 -3176 1861 224 117 29 chr10 126707011 126707165 -13609600 - MLT1E LTR MaLR 0 593 454 2034 154 0 0 chr10 126707165 126707463 -13609302 - AluJb SINE Alu -14 298 1 1861 224 117 29 chr10 126707463 126707853 -13608912 - MLT1E LTR MaLR -139 454 1 563 301 52 78 chr10 126707853 126708105 -13608660 + L1M4 LINE L1 2970 3185 -2961 635 212 15 7 chr10 126708261 126708398 -13608367 + MLT1J LTR MaLR 374 511 0 324 289 115 61 chr10 126708403 126709162 -13607603 + L1M4 LINE L1 4186 5023 -1123 1988 146 0 3 chr10 126709162 126709463 -13607302 + AluSx SINE Alu 9 308 -4 324 289 115 61 chr10 126709463 126709791 -13606974 + L1M4 LINE L1 5023 5332 -814 376 289 114 30 chr10 126710244 126710415 -13606350 - L2 LINE L2 -830 2484 2282 3987 115 30 12 chr10 126710415 126711007 -13605758 - LTR26 LTR ERV1 0 603 1 376 289 114 30 chr10 126711007 126711098 -13605667 - L2 LINE L2 -1032 2282 2200 1509 164 31 110 chr10 126711789 126712180 -13604585 - L1MD3 LINE L1 -7 7988 7629 288 270 112 45 chr10 126712255 126712433 -13604332 + L2 LINE L2 3124 3313 0 2368 43 40 20 chr10 126712454 126712753 -13604012 - AluY SINE Alu -6 305 1 455 251 56 45 chr10 126714314 126714493 -13602272 + MLT1J LTR MaLR 290 470 -41 295 309 52 0 chr10 126714954 126715051 -13601714 + MIR SINE MIR 6 107 -155 627 252 7 0 chr10 126715067 126715214 -13601551 + MIR SINE MIR 44 191 -71 187 309 36 0 chr10 126715360 126715415 -13601350 + MIR SINE MIR 98 154 -108 1896 195 84 32 chr10 126715564 126716030 -13600735 + LTR2B LTR ERV1 1 490 0 1100 170 53 73 chr10 126716055 126716302 -13600463 - AluJo SINE Alu -8 304 63 2004 118 27 74 chr10 126716302 126716894 -13599871 - MER51A LTR ERV1 0 634 1 390 169 13 13 chr10 126716894 126716960 -13599805 - AluJo SINE Alu -236 66 1 1331 165 8 12 chr10 126718844 126719092 -13597673 - MLT2B1 LTR ERVL -255 265 19 2319 104 0 0 chr10 126719304 126719602 -13597163 - AluSx SINE Alu -14 298 1 244 167 289 11 chr10 126719988 126720078 -13596687 - L1ME4a LINE L1 0 6121 6007 437 245 54 76 chr10 126721153 126721300 -13595465 - Charlie8 DNA MER1_type -124 217 73 1935 148 3 0 chr10 126721300 126721598 -13595167 + AluSx SINE Alu 1 299 -13 437 245 54 76 chr10 126721598 126721634 -13595131 - Charlie8 DNA MER1_type -268 73 38 2189 110 0 32 chr10 126722350 126722660 -13594105 - AluSx SINE Alu -12 300 1 371 252 9 0 chr10 126723463 126723570 -13593195 - MER113 DNA MER1_type? -409 112 5 533 330 65 4 chr10 126723800 126724030 -13592735 + MIR SINE MIR 19 262 0 2614 102 61 87 chr10 126724068 126724527 -13592238 - MER83 LTR ERV1 0 448 2 189 295 0 33 chr10 126725085 126725146 -13591619 - L3 LINE CR1 -2 1575 1517 411 293 0 9 chr10 126725406 126725512 -13591253 + MIR SINE MIR 23 127 -135 183 42 0 0 chr10 126725516 126725540 -13591225 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1617 108 0 84 chr10 126725563 126725814 -13590951 - AluSx SINE Alu -82 230 1 4694 134 34 37 chr10 126726322 126726775 -13589990 - L1P4 LINE L1 -387 5778 5325 1543 186 74 0 chr10 126726775 126727060 -13589705 - AluJb SINE Alu -6 306 1 4694 134 34 37 chr10 126727060 126727887 -13588878 - L1P4 LINE L1 -840 5325 4494 1959 172 37 6 chr10 126727930 126728284 -13588481 - MLT1A1 LTR MaLR 0 365 1 206 0 0 65 chr10 126728293 126728324 -13588441 + (TTTTTA)n Simple_repeat Simple_repeat 1 29 0 18143 33 5 0 chr10 126728326 126731271 -13585494 - L1PA4 LINE L1 -3 6152 3199 1438 189 15 19 chr10 126731281 126731545 -13585220 - AluJb SINE Alu -49 263 1 668 298 63 19 chr10 126732038 126732243 -13584522 - MIR SINE MIR -48 214 1 607 97 55 0 chr10 126732796 126732941 -13583824 + (TA)n Simple_repeat Simple_repeat 2 154 0 1477 167 0 4 chr10 126732949 126733188 -13583577 - AluJb SINE Alu -30 282 45 3373 193 100 18 chr10 126735458 126735493 -13581272 + Zaphod DNA AcHobo 44 75 -3956 432 0 0 0 chr10 126735493 126735541 -13581224 + (CA)n Simple_repeat Simple_repeat 2 49 0 3373 193 100 18 chr10 126735541 126736377 -13580388 + Zaphod DNA AcHobo 75 986 -3045 1174 163 85 51 chr10 126736369 126736419 -13580346 + Zaphod DNA AcHobo 3587 3634 -397 * 1524 145 72 33 chr10 126736419 126736695 -13580070 - AluJo SINE Alu -25 287 1 1174 163 85 51 chr10 126736695 126736938 -13579827 + Zaphod DNA AcHobo 3634 3890 -141 9240 149 44 7 chr10 126736941 126738393 -13578372 - L1PBa LINE L1 -2268 4594 3198 2432 84 0 3 chr10 126738393 126738701 -13578064 - AluY SINE Alu -4 307 1 9240 149 44 7 chr10 126738701 126740226 -13576539 - L1PBa LINE L1 -3664 3198 1502 5927 175 22 9 chr10 126740955 126741881 -13574884 - L1M LINE L1 -815 5331 4396 189 0 0 0 chr10 126741881 126741902 -13574863 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5927 175 22 9 chr10 126741902 126742178 -13574587 - L1M LINE L1 -1750 4396 4125 1584 200 161 9 chr10 126742171 126742843 -13573922 - L1ME LINE L1 -642 5524 4748 * 2108 121 7 23 chr10 126743680 126743986 -13572779 - AluSx SINE Alu -11 301 1 366 23 0 0 chr10 126744537 126744580 -13572185 + (TG)n Simple_repeat Simple_repeat 1 43 0 296 236 0 0 chr10 126744649 126744704 -13572061 - MIR SINE MIR -66 142 88 3010 146 72 12 chr10 126744805 126745291 -13571474 - MLT2B2 LTR ERVL 0 515 1 411 243 36 9 chr10 126745389 126745500 -13571265 + MER81 DNA DNA 1 114 0 884 262 17 34 chr10 126745895 126746132 -13570633 + MIR SINE MIR 17 249 -13 2864 170 45 4 chr10 126747049 126747532 -13569233 - MLT2B1 LTR ERVL -17 503 1 1662 223 147 12 chr10 126747647 126748055 -13568710 - MLT1C LTR MaLR -4 463 1 425 270 146 66 chr10 126748065 126748428 -13568337 + MLT1K LTR MaLR 196 587 -1 651 278 169 42 chr10 126748945 126749448 -13567317 - MLT1L LTR MaLR -10 605 39 21 82 0 0 chr10 126749667 126749716 -13567049 + AT_rich Low_complexity Low_complexity 1 49 0 1244 265 137 34 chr10 126749733 126750612 -13566153 + L1M4 LINE L1 3001 3969 -2177 2130 141 0 0 chr10 126750787 126751092 -13565673 - AluSq SINE Alu -8 305 1 310 306 35 41 chr10 126751095 126751265 -13565500 - L1MC4a LINE L1 -1871 5937 5769 287 299 55 8 chr10 126751789 126751916 -13564849 + MIR SINE MIR 56 188 -74 246 309 25 0 chr10 126752786 126752867 -13563898 + L2 LINE L2 3227 3309 -4 1824 174 9 19 chr10 126753204 126753414 -13563351 - MLT1C LTR MaLR -55 412 204 2772 128 23 23 chr10 126753414 126753842 -13562923 - MSTA LTR MaLR 0 428 1 1824 174 9 19 chr10 126753842 126753947 -13562818 - MLT1C LTR MaLR -263 204 100 923 135 0 8 chr10 126753953 126754086 -13562679 + FRAM SINE Alu 20 151 -25 397 150 0 0 chr10 126754087 126754147 -13562618 - MLT1C LTR MaLR -375 92 33 252 0 0 0 chr10 126755256 126755284 -13561481 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1502 122 134 4 chr10 126757103 126757341 -13559424 + AluSx SINE Alu 31 299 -13 5392 130 33 45 chr10 126758908 126758920 -13557845 + L1MA9 LINE L1 4808 4819 -1493 1580 158 12 0 chr10 126758920 126759179 -13557586 - L1MB5 LINE L1 -6 6168 5907 5392 130 33 45 chr10 126759179 126760524 -13556241 + L1MA9 LINE L1 4819 6137 -175 219 36 0 0 chr10 126760524 126760552 -13556213 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 828 176 0 0 chr10 126760552 126760671 -13556094 - FLAM_C SINE Alu -24 119 1 893 139 61 33 chr10 126760672 126760852 -13555913 + L1MA9 LINE L1 6128 6312 0 1126 153 10 24 chr10 126760879 126761088 -13555677 - L1MB5 LINE L1 -252 5922 5717 2472 145 6 11 chr10 126761356 126761722 -13555043 + THE1B LTR MaLR 1 364 0 627 282 46 0 chr10 126762854 126763028 -13553737 + MIR SINE MIR 32 213 -49 213 304 185 29 chr10 126763464 126763682 -13553083 - L2 LINE L2 -16 3256 2995 2209 99 3 3 chr10 126763682 126763976 -13552789 + AluSx SINE Alu 11 304 -8 213 304 185 29 chr10 126763976 126764000 -13552765 - L2 LINE L2 -277 2995 2976 267 243 71 0 chr10 126764030 126764100 -13552665 + MLT1K LTR MaLR 509 583 -5 198 0 0 0 chr10 126765713 126765735 -13551030 + (TG)n Simple_repeat Simple_repeat 2 23 0 271 312 43 14 chr10 126766184 126766322 -13550443 - MLT1K LTR MaLR -27 561 420 208 330 107 0 chr10 126766940 126767052 -13549713 - L2 LINE L2 -2000 1314 1191 724 282 99 33 chr10 126767110 126767186 -13549579 - L2 LINE L2 -2326 988 918 951 226 194 16 chr10 126767186 126767496 -13549269 - MLT1A1 LTR MaLR 0 365 1 724 282 99 33 chr10 126767496 126767907 -13548858 - L2 LINE L2 -2396 918 391 826 212 133 104 chr10 126768032 126768580 -13548185 + MER34B LTR ERV1 1 564 -1 985 178 88 36 chr10 126768647 126768984 -13547781 - MSTD LTR MaLR 0 396 3 734 176 28 21 chr10 126769983 126770125 -13546640 + AluJo SINE Alu 117 259 -53 399 157 0 0 chr10 126770617 126770687 -13546078 + GA-rich Low_complexity Low_complexity 3 72 0 511 318 91 21 chr10 126771118 126771360 -13545405 - MIR SINE MIR 0 262 4 354 297 88 58 chr10 126771687 126772098 -13544667 - L1ME LINE L1 -4842 1698 1276 339 266 70 26 chr10 126772609 126772785 -13543980 - L1ME LINE L1 -5886 644 462 2845 60 11 6 chr10 126773919 126774272 -13542493 - THE1C LTR MaLR 0 375 21 317 103 224 0 chr10 126774300 126774358 -13542407 - THE1C LTR MaLR -304 71 1 220 403 16 8 chr10 126774696 126774825 -13541940 + MIR SINE MIR 18 147 -61 853 92 33 0 chr10 126774830 126774950 -13541815 + L1MA8 LINE L1 6165 6288 -3 1581 160 59 7 chr10 126775097 126775385 -13541380 - AluJo SINE Alu -9 303 1 2338 71 14 0 chr10 126775607 126775901 -13540864 + AluY SINE Alu 1 298 -13 750 167 53 0 chr10 126775901 126776015 -13540750 - AluJo/FLAM SINE Alu -192 120 1 300 306 35 0 chr10 126776199 126776284 -13540481 + MIR SINE MIR 56 143 -65 182 365 0 0 chr10 126776364 126776416 -13540349 + MIR SINE MIR 28 79 -129 508 288 153 36 chr10 126776808 126776894 -13539871 - L1ME LINE L1 -348 5773 5698 2524 77 0 3 chr10 126776894 126777204 -13539561 - AluSx SINE Alu -3 309 1 508 288 153 36 chr10 126777204 126777530 -13539235 - L1ME LINE L1 -423 5698 5313 1133 61 0 0 chr10 126778335 126778467 -13538298 + AluSq/x SINE Alu 1 132 -181 1390 148 148 4 chr10 126778468 126778712 -13538053 - AluJo SINE Alu -33 279 1 283 318 47 0 chr10 126778916 126779001 -13537764 + MIR SINE MIR 64 152 -110 2067 93 70 103 chr10 126779635 126780023 -13536742 - THE1C LTR MaLR 0 375 1 281 232 16 35 chr10 126780036 126780128 -13536637 + L1MC5 LINE L1 7843 7995 0 1409 122 10 5 chr10 126780467 126780672 -13536093 - AluSg/x SINE Alu -1 311 106 295 105 18 53 chr10 126781789 126781846 -13534919 - AluS SINE Alu -228 74 20 2499 221 108 69 chr10 126781864 126782878 -13533887 - MER69B DNA AcHobo -71 1155 103 2152 127 145 16 chr10 126782956 126783335 -13533430 + MSTA LTR MaLR 1 428 0 306 286 104 19 chr10 126783904 126784058 -13532707 - MIR SINE MIR -76 186 20 2200 125 3 0 chr10 126784154 126784465 -13532300 + AluSx SINE Alu 1 312 0 4407 194 55 72 chr10 126784508 126785566 -13531199 - MER45B DNA AcHobo 0 1040 1 186 171 0 0 chr10 126785919 126785960 -13530805 + (CA)n Simple_repeat Simple_repeat 2 42 0 27 0 0 0 chr10 126786317 126786344 -13530421 + AT_rich Low_complexity Low_complexity 1 27 0 461 265 140 76 chr10 126786500 126786716 -13530049 + L1ME4a LINE L1 5468 5669 -452 786 168 25 0 chr10 126786716 126786835 -13529930 + FLAM_A SINE Alu 1 122 -11 461 265 140 76 chr10 126786835 126787163 -13529602 + L1ME4a LINE L1 5669 6044 -77 681 253 28 16 chr10 126787959 126788141 -13528624 + MIR SINE MIR 8 191 -71 1198 150 33 5 chr10 126788147 126788360 -13528405 + L1M4 LINE L1 5600 5818 -360 1024 173 61 88 chr10 126788504 126788729 -13528036 - MSTB LTR MaLR -53 404 202 2014 96 15 0 chr10 126788729 126789001 -13527764 - AluY SINE Alu -13 298 23 1024 173 61 88 chr10 126789001 126789198 -13527567 - MSTB LTR MaLR -255 202 1 288 300 56 0 chr10 126789724 126789814 -13526951 + MLT1J LTR MaLR 103 197 -314 437 178 0 0 chr10 126790034 126790107 -13526658 + MER67D LTR ERV1 87 159 -355 1471 93 5 0 chr10 126790108 126790302 -13526463 + LTR12 LTR ERV1 80 274 -440 342 263 10 0 chr10 126790306 126790405 -13526360 + LTR30 LTR ERV1 544 643 -79 28782 104 22 10 chr10 126790405 126795301 -13521464 + Harlequin LTR ERV1 1 4944 -2001 2334 165 187 45 chr10 126795313 126796082 -13520683 + Harlequin LTR ERV1 843 1720 -5176 * 4677 103 5 0 chr10 126796077 126796717 -13520048 + Harlequin LTR ERV1 7757 8399 0 275 231 0 0 chr10 126796717 126796769 -13519996 + LTR30 LTR ERV1 1 52 -670 1424 100 14 142 chr10 126796769 126797084 -13519681 + LTR12 LTR ERV1 57 2032 -406 315 239 34 0 chr10 126797085 126797173 -13519592 + LTR30 LTR ERV1 553 643 -79 746 90 0 0 chr10 126797175 126797275 -13519490 + LTR12 LTR ERV1 615 714 0 318 214 198 43 chr10 126797277 126797464 -13519301 + MER67C LTR ERV1 188 403 -307 * 413 249 31 6 chr10 126797433 126797648 -13519117 + MER67D LTR ERV1 273 528 -15 1449 141 102 14 chr10 126797949 126798232 -13518533 - AluJb SINE Alu -2 310 3 1049 98 0 0 chr10 126798260 126798392 -13518373 + AluSq/x SINE Alu 1 132 -180 1390 148 148 4 chr10 126798393 126798637 -13518128 - AluJo SINE Alu -33 279 1 283 318 47 0 chr10 126798841 126798926 -13517839 + MIR SINE MIR 64 152 -110 2067 93 70 103 chr10 126799560 126799948 -13516817 - THE1C LTR MaLR 0 375 1 281 232 16 35 chr10 126799961 126800053 -13516712 + L1MC5 LINE L1 7843 7995 0 1409 122 10 5 chr10 126800392 126800597 -13516168 - AluSg/x SINE Alu -1 311 106 239 184 13 53 chr10 126801624 126801700 -13515065 + L1MC4 LINE L1 6635 6707 -1335 351 261 136 43 chr10 126801969 126802153 -13514612 + MIR3 SINE MIR 8 208 0 2381 90 0 0 chr10 126803524 126803823 -13512942 + AluY SINE Alu 1 299 -12 1773 158 0 14 chr10 126804014 126804306 -13512459 + AluJb SINE Alu 1 288 -24 2034 119 24 0 chr10 126804314 126804609 -13512156 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 126804609 126804630 -13512135 + AT_rich Low_complexity Low_complexity 1 21 0 1726 161 6 40 chr10 126804659 126804981 -13511784 - AluJo SINE Alu -1 311 1 257 200 92 0 chr10 126805434 126805499 -13511266 - HsTC2 DNA Tc2 0 1900 1830 330 264 35 56 chr10 126805694 126805838 -13510927 + L1MEd LINE L1 500 640 -5479 832 125 108 0 chr10 126805867 126805987 -13510778 - FLAM_C SINE Alu 0 133 1 228 208 42 28 chr10 126805995 126806067 -13510698 - HsTC2 DNA Tc2 -1823 75 3 2264 114 0 0 chr10 126806357 126806664 -13510101 - AluSx SINE Alu -4 308 2 2157 72 43 0 chr10 126806834 126807144 -13509621 + AluY SINE Alu 1 311 0 611 263 79 75 chr10 126807163 126807444 -13509321 + L1ME4a LINE L1 5315 5600 -521 2004 98 66 11 chr10 126807444 126807731 -13509034 - AluSx SINE Alu -9 303 1 611 263 79 75 chr10 126807731 126807958 -13508807 + L1ME4a LINE L1 5600 5825 -296 471 209 119 15 chr10 126807959 126808093 -13508672 + L1MC4a LINE L1 5697 5844 -1964 496 267 168 72 chr10 126808101 126808434 -13508331 + L2 LINE L2 2949 3313 0 228 182 0 0 chr10 126808434 126808478 -13508287 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 2252 121 0 0 chr10 126808532 126808830 -13507935 - AluSx SINE Alu -14 298 1 1285 99 0 0 chr10 126808992 126809154 -13507611 - AluSq SINE Alu -151 162 1 260 242 37 3 chr10 126809871 126809965 -13506800 + MLT1J LTR MaLR 427 509 -2 2523 55 0 0 chr10 126812160 126812453 -13504312 + AluY SINE Alu 4 296 -15 840 175 0 21 chr10 126812510 126812653 -13504112 + FLAM_C SINE Alu 2 141 -2 682 101 71 0 chr10 126812716 126812815 -13503950 - AluSc SINE Alu -9 300 195 828 196 0 0 chr10 126814060 126814193 -13502572 + FLAM_C SINE Alu 1 133 0 2308 97 0 3 chr10 126814475 126814773 -13501992 + AluY SINE Alu 1 297 -14 870 234 44 44 chr10 126814896 126815144 -13501621 + MIR SINE MIR 15 262 0 320 355 0 16 chr10 126815430 126815551 -13501214 - MIR3 SINE MIR -87 121 3 255 239 190 11 chr10 126815701 126815885 -13500880 + L1ME2 LINE L1 5254 5470 -2338 423 284 94 94 chr10 126816011 126816258 -13500507 + L1ME2 LINE L1 5477 5723 -398 1804 187 63 57 chr10 126816258 126816717 -13500048 + MLT1C LTR MaLR 5 466 -1 423 284 94 94 chr10 126816717 126816811 -13499954 + L1ME2 LINE L1 5723 5821 -300 1564 195 6 41 chr10 126816811 126817129 -13499636 + AluJo SINE Alu 1 307 -5 423 284 94 94 chr10 126817129 126817170 -13499595 + L1ME2 LINE L1 5820 5860 -261 1812 153 7 3 chr10 126818167 126818455 -13498310 + AluJo SINE Alu 1 289 -23 882 196 35 133 chr10 126818622 126818938 -13497827 + L1ME2 LINE L1 5848 6132 -32 1891 146 4 0 chr10 126818938 126819219 -13497546 + AluJo SINE Alu 7 288 -24 2130 80 39 11 chr10 126819296 126819582 -13497183 + AluSx SINE Alu 1 294 -18 2303 98 0 0 chr10 126820160 126820455 -13496310 + AluSx SINE Alu 1 295 -17 194 167 167 0 chr10 126821150 126821198 -13495567 + MIR SINE MIR 157 212 -50 23 54 0 0 chr10 126822257 126822294 -13494471 + AT_rich Low_complexity Low_complexity 1 37 0 329 248 124 9 chr10 126822456 126822569 -13494196 - MIR SINE MIR -45 217 92 566 160 0 10 chr10 126822572 126822672 -13494093 + FLAM_A SINE Alu 38 136 -6 302 250 59 0 chr10 126822777 126822845 -13493920 - MER81 DNA DNA -42 72 1 1211 281 100 14 chr10 126823512 126824064 -13492701 - L1MC4a LINE L1 -1899 5909 5311 2302 104 0 0 chr10 126824715 126825013 -13491752 + AluSq SINE Alu 1 298 -15 433 191 11 45 chr10 126825288 126825410 -13491355 + FLAM_C SINE Alu 28 146 0 2220 130 0 0 chr10 126826330 126826629 -13490136 + AluSx SINE Alu 1 299 -13 1082 154 6 0 chr10 126826632 126826801 -13489964 + AluSg/x SINE Alu 123 292 -20 1715 169 7 7 chr10 126826848 126827127 -13489638 + AluJo SINE Alu 9 287 -25 463 104 0 15 chr10 126827739 126827806 -13488959 + MER20 DNA MER1_type 3 68 -151 312 262 106 71 chr10 126828658 126828799 -13487966 + MIR SINE MIR 117 262 0 182 269 0 19 chr10 126828952 126829004 -13487761 + L3 LINE CR1 1526 1576 -1 281 141 0 155 chr10 126829780 126829825 -13486940 + MER58A DNA MER1_type 9 42 -299 2186 93 0 28 chr10 126829825 126830139 -13486626 - AluSq SINE Alu 0 306 1 281 141 0 155 chr10 126830139 126830163 -13486602 + MER58A DNA MER1_type 42 68 -156 255 100 25 0 chr10 126830217 126830257 -13486508 + Alu SINE Alu 1 41 -259 250 125 0 25 chr10 126830538 126830578 -13486187 + LTR67 LTR ERVL 99 137 -420 * 1145 256 71 19 chr10 126830544 126830868 -13485897 + MLT1J LTR MaLR 100 440 -71 198 0 0 0 chr10 126830903 126830925 -13485840 + (T)n Simple_repeat Simple_repeat 1 22 0 1038 235 185 32 chr10 126831715 126831935 -13484830 - MER34C LTR ERV1 0 585 400 2767 112 65 2 chr10 126831935 126832336 -13484429 + MSTB LTR MaLR 1 426 0 1038 235 185 32 chr10 126832336 126832622 -13484143 - MER34C LTR ERV1 -185 400 1 365 233 32 108 chr10 126832950 126833199 -13483566 + LTR16A1 LTR ERVL 217 446 -11 270 136 0 0 chr10 126833641 126833685 -13483080 + (A)n Simple_repeat Simple_repeat 1 44 0 553 228 112 78 chr10 126834169 126834401 -13482364 - MIR SINE MIR 0 262 23 209 341 62 16 chr10 126834405 126834534 -13482231 - MIR3 SINE MIR -50 158 24 705 139 73 0 chr10 126835143 126835280 -13481485 + L1MA8 LINE L1 6145 6291 0 5372 136 29 36 chr10 126835387 126836323 -13480442 + L1MA10 LINE L1 5406 6334 0 531 304 214 36 chr10 126836571 126837095 -13479670 - L3 LINE CR1 -124 1453 821 2457 190 46 62 chr10 126837095 126837658 -13479107 + MLT2B3 LTR ERVL 1 554 0 531 304 214 36 chr10 126837658 126837695 -13479070 - L3 LINE CR1 -756 821 792 548 197 118 8 chr10 126837702 126837829 -13478936 + MLT1J1 LTR MaLR 1 141 -305 583 188 30 23 chr10 126837863 126837996 -13478769 + L1MC5 LINE L1 7088 7221 -740 1321 206 93 83 chr10 126837999 126838658 -13478107 + L1MC5 LINE L1 7266 7930 -31 662 331 89 48 chr10 126839069 126839308 -13477457 - L3 LINE CR1 -954 623 395 2254 103 0 13 chr10 126839308 126839609 -13477156 + AluSq SINE Alu 1 297 -16 662 331 89 48 chr10 126839609 126839853 -13476912 - L3 LINE CR1 -1182 395 120 1211 238 37 79 chr10 126842180 126842688 -13474077 - MER34 LTR ERV1 0 542 56 521 175 92 0 chr10 126842814 126842934 -13473831 - MER34 LTR ERV1 -411 131 1 474 286 143 20 chr10 126842985 126843181 -13473584 + MIR SINE MIR 31 250 -12 2112 110 4 0 chr10 126844246 126844572 -13472193 - AluSg SINE Alu 0 327 1 2222 112 30 0 chr10 126844855 126845158 -13471607 + AluSx SINE Alu 1 312 0 296 316 94 43 chr10 126845231 126845348 -13471417 - L2 LINE L2 -8 3264 3142 799 258 48 99 chr10 126845701 126845928 -13470837 - MER34 LTR ERV1 -3 539 302 6454 165 16 24 chr10 126845928 126847471 -13469294 - L1PA12 LINE L1 0 6168 4614 1812 167 0 0 chr10 126847471 126847740 -13469025 + AluSx SINE Alu 1 269 -43 180 77 0 0 chr10 126847746 126847772 -13468993 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6454 165 16 24 chr10 126847772 126848239 -13468526 - L1PA12 LINE L1 -1559 4609 4174 799 258 48 99 chr10 126848239 126848578 -13468187 - MER34 LTR ERV1 -240 302 2 * 1070 267 141 28 chr10 126848578 126848995 -13467770 + MLT1J LTR MaLR 46 511 0 1193 248 35 40 chr10 126849444 126849461 -13467304 - MER93b LTR ERV1 -4 369 353 1373 153 129 20 chr10 126849461 126849716 -13467049 + AluJo SINE Alu 1 283 -29 1193 248 35 40 chr10 126849716 126850069 -13466696 - MER93b LTR ERV1 -20 353 1 488 287 19 0 chr10 126850073 126850181 -13466584 - MER81 DNA DNA -3 111 2 188 279 82 0 chr10 126850852 126850913 -13465852 + L2 LINE L2 3163 3228 -85 362 268 146 0 chr10 126851038 126851161 -13465604 + MIR SINE MIR 108 248 -14 880 193 26 86 chr10 126851628 126851861 -13464904 - MER20 DNA MER1_type 0 219 1 411 180 0 0 chr10 126852019 126852080 -13464685 - FLAM SINE Alu -18 125 65 942 174 0 7 chr10 126852122 126852277 -13464488 - FRAM SINE Alu -10 166 13 258 324 0 0 chr10 126852674 126852748 -13464017 + C-rich Low_complexity Low_complexity 4 77 0 249 295 107 49 chr10 126853061 126853613 -13463152 + L1M4 LINE L1 3190 3773 -2373 2440 71 30 76 chr10 126853641 126854047 -13462718 - L1PB3 LINE L1 -250 5904 5518 423 269 168 19 chr10 126854122 126854390 -13462375 + L1M4 LINE L1 3826 4133 -2013 2369 87 0 13 chr10 126854500 126854809 -13461956 + AluY SINE Alu 1 305 -6 241 369 80 11 chr10 126855018 126855205 -13461560 - MIR3 SINE MIR -7 201 2 21 36 0 0 chr10 126855229 126855257 -13461508 + AT_rich Low_complexity Low_complexity 1 28 0 371 113 16 0 chr10 126855976 126856038 -13460727 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 977 26 0 26 chr10 126856334 126856448 -13460317 - L1PA7 LINE L1 -5 6149 6039 1387 161 5 0 chr10 126856609 126856833 -13459932 - L1PA15 LINE L1 -44 6121 5897 462 92 0 0 chr10 126856833 126856898 -13459867 + L1PA15 LINE L1 6093 6157 -8 3481 136 63 15 chr10 126857974 126858257 -13458508 - LTR24C LTR ERV1 -1 634 366 3137 115 32 0 chr10 126858257 126858700 -13458065 - L1PA16 LINE L1 -12 6154 5698 3481 136 63 15 chr10 126858700 126859021 -13457744 - LTR24C LTR ERV1 -269 366 1 379 311 65 44 chr10 126859096 126859160 -13457605 + L2 LINE L2 3061 3122 -191 1429 188 106 54 chr10 126859160 126859586 -13457179 + LTR7 LTR ERV1 1 448 -2 379 311 65 44 chr10 126859586 126859769 -13456996 + L2 LINE L2 3122 3313 0 2203 148 29 58 chr10 126859825 126860277 -13456488 + L1MB7 LINE L1 5746 6184 0 708 233 38 0 chr10 126861413 126861572 -13455193 - MER20 DNA MER1_type 0 219 55 193 269 90 30 chr10 126862250 126862317 -13454448 - L3 LINE CR1 -15 1562 1492 258 301 75 11 chr10 126864555 126864648 -13452117 + L2 LINE L2 2546 2644 -670 722 171 9 0 chr10 126864894 126865005 -13451760 + FLAM_C SINE Alu 2 113 -30 21 36 0 0 chr10 126865219 126865247 -13451518 + AT_rich Low_complexity Low_complexity 1 28 0 1096 39 78 0 chr10 126867435 126867564 -13449201 - MER85 DNA T2_type 0 139 1 2007 134 17 0 chr10 126868442 126868740 -13448025 + AluSq SINE Alu 1 303 -10 25 51 0 0 chr10 126869335 126869374 -13447391 + AT_rich Low_complexity Low_complexity 1 39 0 825 97 18 0 chr10 126869388 126869501 -13447264 - L1PB3 LINE L1 -4 6150 6036 904 133 7 7 chr10 126869692 126869827 -13446938 - AluJo SINE Alu -177 135 1 6675 90 3 11 chr10 126870069 126871228 -13445537 + L1PA8A LINE L1 4980 6131 0 479 120 0 0 chr10 126871702 126871777 -13444988 - Tigger1 DNA MER2_type -138 2280 2206 * 669 190 113 7 chr10 126871770 126871912 -13444853 - Tigger1 DNA MER2_type -2261 157 1 447 318 46 29 chr10 126871938 126872111 -13444654 + MLT1J2 LTR MaLR 125 300 -150 656 250 11 5 chr10 126872112 126872300 -13444465 - LTR16B LTR ERVL 0 464 276 979 274 76 20 chr10 126872502 126872910 -13443855 - LTR16B LTR ERVL 0 464 34 1439 204 64 124 chr10 126873150 126873256 -13443509 + MLT1F1 LTR MaLR 70 181 -386 1834 168 0 10 chr10 126873256 126873560 -13443205 + AluJb SINE Alu 1 301 -11 1439 204 64 124 chr10 126873560 126873983 -13442782 + MLT1F1 LTR MaLR 181 567 0 182 244 67 0 chr10 126874040 126874085 -13442680 - L3b LINE CR1 -1 1582 1535 568 275 54 6 chr10 126874100 126874267 -13442498 + MER5B DNA MER1_type 1 175 -3 264 191 0 0 chr10 126874346 126874393 -13442372 + AluYb8 SINE Alu 135 181 -127 5247 154 53 34 chr10 126874496 126874619 -13442146 - L1MC3 LINE L1 -71 7714 7595 489 165 0 0 chr10 126874619 126874698 -13442067 - MADE1 DNA Mariner 0 80 2 5247 154 53 34 chr10 126874698 126875616 -13441149 - L1MC3 LINE L1 -190 7595 6653 * 11523 154 11 20 chr10 126875615 126878888 -13437877 - L1P3 LINE L1 -3157 3304 1 2541 62 0 0 chr10 126878977 126879286 -13437479 + AluY SINE Alu 1 309 -2 198 0 0 0 chr10 126879369 126879391 -13437374 + (T)n Simple_repeat Simple_repeat 1 22 0 210 291 150 55 chr10 126881169 126881296 -13435469 - L2 LINE L2 -39 3233 3095 401 311 92 0 chr10 126881348 126881467 -13435298 - MIR SINE MIR -105 157 28 375 310 53 45 chr10 126882018 126882344 -13434421 - MLT1K LTR MaLR -15 573 210 446 319 79 11 chr10 126882884 126883112 -13433653 - MIR SINE MIR -7 255 16 1692 198 7 3 chr10 126883198 126883496 -13433269 - AluJo SINE Alu -13 299 1 335 256 9 0 chr10 126884511 126884644 -13432121 + L2 LINE L2 3195 3311 -2 296 335 53 82 chr10 126886400 126886681 -13430084 + L2 LINE L2 2809 3081 -191 379 266 250 16 chr10 126886701 126886885 -13429880 + MIR SINE MIR 24 250 -12 557 266 63 0 chr10 126886994 126887144 -13429621 + MIR SINE MIR 40 201 -61 1068 174 16 16 chr10 126887144 126887328 -13429437 - MER58A DNA MER1_type -2 222 39 288 213 27 40 chr10 126887345 126887420 -13429345 + MIR SINE MIR 189 262 0 1660 204 46 85 chr10 126887530 126888034 -13428731 + MLT1D LTR MaLR 22 505 0 480 296 92 63 chr10 126889003 126889086 -13427679 + MLT1J1 LTR MaLR 52 131 -315 2721 116 41 32 chr10 126889086 126889527 -13427238 - MER65A LTR ERV1 0 445 1 480 296 92 63 chr10 126889527 126889825 -13426940 + MLT1J1 LTR MaLR 131 444 -2 28 0 0 0 chr10 126890853 126890881 -13425884 + AT_rich Low_complexity Low_complexity 1 28 0 246 143 32 16 chr10 126890931 126890994 -13425771 + (TA)n Simple_repeat Simple_repeat 1 64 0 626 250 21 79 chr10 126891224 126891464 -13425301 - MER102a DNA MER1_type -9 321 96 211 130 29 58 chr10 126891481 126891550 -13425215 + A-rich Low_complexity Low_complexity 3 69 0 746 265 96 21 chr10 126892204 126892495 -13424270 - LTR16C LTR ERVL 0 491 179 2488 61 0 6 chr10 126892807 126893119 -13423646 - AluY SINE Alu -1 310 1 207 69 0 0 chr10 126893383 126893412 -13423353 + (T)n Simple_repeat Simple_repeat 1 29 0 217 279 127 13 chr10 126894009 126894088 -13422677 - L2 LINE L2 -6 3266 3179 1231 137 123 0 chr10 126894111 126894322 -13422443 + AluSg/x SINE Alu 75 311 -1 208 324 38 19 chr10 126894685 126894790 -13421975 + MIR SINE MIR 32 138 -124 441 246 39 84 chr10 126894849 126895028 -13421737 + MER5B DNA MER1_type 3 173 -5 592 251 92 36 chr10 126895224 126895419 -13421346 - L1ME3A LINE L1 -8 6162 5957 774 182 8 0 chr10 126895469 126895590 -13421175 + FLAM_A SINE Alu 1 122 -11 225 0 0 0 chr10 126895602 126895627 -13421138 + (TG)n Simple_repeat Simple_repeat 2 26 0 337 189 100 11 chr10 126895628 126895718 -13421047 + L1MC4 LINE L1 6608 6705 -1337 526 271 30 88 chr10 126895862 126896124 -13420641 + MIR SINE MIR 13 259 -3 3593 172 35 45 chr10 126896271 126896871 -13419894 - L1MB3 LINE L1 -12 6171 5567 252 0 0 0 chr10 126896871 126896899 -13419866 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2056 128 7 0 chr10 126896903 126897185 -13419580 - AluSq SINE Alu -29 284 1 3593 172 35 45 chr10 126897185 126897318 -13419447 - L1MB3 LINE L1 -619 5564 5440 2024 139 0 16 chr10 126897661 126897977 -13418788 - AluSx SINE Alu -1 311 1 1799 178 30 24 chr10 126898262 126898599 -13418166 + LTR32 LTR ERVL 14 352 -119 751 181 14 7 chr10 126898616 126898760 -13418005 + LTR32 LTR ERVL 327 471 0 10994 78 3 6 chr10 126898901 126901071 -13415694 - L1PA7 LINE L1 -3 6151 3983 2022 154 0 3 chr10 126901175 126901498 -13415267 + AluSx SINE Alu 2 323 0 338 280 164 42 chr10 126901907 126902121 -13414644 - MIR SINE MIR -1 261 22 5767 152 75 3 chr10 126902583 126903678 -13413087 - L1MC2 LINE L1 -5 6339 5170 418 311 50 6 chr10 126903862 126904023 -13412742 - L2 LINE L2 -4 3268 3101 397 284 45 34 chr10 126904312 126904488 -13412277 + MER5B DNA MER1_type 1 178 0 1505 154 141 23 chr10 126904587 126904886 -13411879 - LTR47A LTR ERVL -8 444 111 201 209 70 9 chr10 126905181 126905296 -13411469 + (TA)n Simple_repeat Simple_repeat 2 123 0 * 334 197 16 60 chr10 126905239 126905422 -13411343 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 207 316 18 0 chr10 126905879 126905936 -13410829 + MER5B DNA MER1_type 1 58 -120 272 297 153 9 chr10 126906110 126906221 -13410544 - MIR3 SINE MIR -53 155 29 886 30 0 0 chr10 126907581 126907680 -13409085 + L1PA8 LINE L1 6069 6167 -5 897 316 92 16 chr10 126907680 126908170 -13408595 - L1ME4a LINE L1 -29 6092 5566 377 264 31 47 chr10 126908285 126908414 -13408351 + L2 LINE L2 3187 3313 0 393 303 52 28 chr10 126908425 126908636 -13408129 - L1ME4a LINE L1 -813 5333 5118 243 252 65 50 chr10 126908696 126908835 -13407930 - L1P LINE L1 -1092 5054 4914 207 250 281 21 chr10 126908986 126909082 -13407683 - MIR SINE MIR -72 136 16 13754 104 6 9 chr10 126909879 126910750 -13406015 - L1P3 LINE L1 -2450 4011 3138 1967 119 0 4 chr10 126910750 126911019 -13405746 - AluSg SINE Alu -3 307 40 13754 104 6 9 chr10 126911019 126912162 -13404603 - L1P3 LINE L1 -3323 3138 2005 1868 84 0 0 chr10 126913123 126913362 -13403403 - L1P3 LINE L1 -6215 246 8 3452 195 25 14 chr10 126913875 126914520 -13402245 + MER82 DNA MER2_type 1 652 -1 298 269 37 60 chr10 126914583 126914717 -13402048 + MIR SINE MIR 17 147 -61 23 0 0 0 chr10 126915672 126915695 -13401070 + AT_rich Low_complexity Low_complexity 1 23 0 387 89 0 0 chr10 126917113 126917169 -13399596 + (TG)n Simple_repeat Simple_repeat 2 57 0 366 315 133 18 chr10 126918038 126918203 -13398562 + MIR SINE MIR 2 185 -77 202 345 0 0 chr10 126918445 126918500 -13398265 + L2 LINE L2 3229 3283 -30 180 271 86 14 chr10 126918527 126918597 -13398168 + L2 LINE L2 2630 2704 -610 518 271 69 32 chr10 126919004 126919192 -13397573 - LTR33 LTR ERVL -320 201 7 318 269 0 0 chr10 126920162 126920240 -13396525 - L1MC4 LINE L1 -1339 6703 6626 180 217 0 0 chr10 126920852 126920898 -13395867 + A-rich Low_complexity Low_complexity 1 46 0 322 260 160 52 chr10 126921117 126921386 -13395379 - L1M4 LINE L1 -748 5398 5101 2717 168 10 12 chr10 126922677 126923176 -13393589 - L1MC3 LINE L1 0 7785 7288 302 220 119 42 chr10 126923176 126923294 -13393471 - MIR3 SINE MIR -67 141 15 303 270 0 22 chr10 126923644 126923733 -13393032 + MER113 DNA MER1_type? 1 87 -434 571 343 23 3 chr10 126924201 126924501 -13392264 + LTR16C LTR ERVL 66 371 -120 314 365 127 0 chr10 126924540 126924666 -13392099 + L2 LINE L2 3126 3267 -5 257 216 45 45 chr10 126924786 126924897 -13391868 - LTR67 LTR ERVL -13 544 434 400 262 68 24 chr10 126924933 126925124 -13391641 - MIR SINE MIR 0 262 14 549 248 8 0 chr10 126925435 126925552 -13391213 + MER5A DNA MER1_type 4 121 -68 871 231 109 61 chr10 126925832 126926208 -13390557 - MLT1K LTR MaLR -7 581 188 1362 223 18 71 chr10 126926293 126926746 -13390019 + MER63B DNA MER1_type 5 433 -3 363 263 0 84 chr10 126927382 126927572 -13389193 + G-rich Low_complexity Low_complexity 1 174 0 228 219 0 0 chr10 126928694 126928735 -13388030 - L1M4b LINE L1 -6326 533 493 189 304 36 0 chr10 126928791 126928847 -13387918 - MIR SINE MIR -119 143 86 402 165 89 0 chr10 126929123 126929202 -13387563 - L1M4b LINE L1 -5676 1183 1098 601 72 48 0 chr10 126929203 126929286 -13387479 + Alu SINE Alu 224 310 0 4620 170 158 20 chr10 126929289 126930264 -13386501 - L1M4b LINE L1 -5748 1111 3 12412 132 12 11 chr10 126930270 126931692 -13385073 - Tigger1 DNA MER2_type 0 2418 991 3096 64 11 8 chr10 126931692 126932066 -13384699 - THE1C LTR MaLR 0 375 1 12412 132 12 11 chr10 126932066 126932585 -13384180 - Tigger1 DNA MER2_type -1427 991 474 5780 191 132 21 chr10 126932585 126934157 -13382608 - L1MA4A LINE L1 -8 7357 5961 2077 94 4 0 chr10 126934157 126934423 -13382342 - L1PA7 LINE L1 -14 6140 5874 5780 191 132 21 chr10 126934423 126934444 -13382321 - L1MA4A LINE L1 -1404 5961 5944 2340 103 0 6 chr10 126934444 126934756 -13382009 + AluSg SINE Alu 1 310 0 5780 191 132 21 chr10 126934756 126935609 -13381156 - L1MA4A LINE L1 -1421 5944 4482 4156 246 141 28 chr10 126935606 126937265 -13379500 - L1MA4A LINE L1 -5474 1735 1 * 1393 105 0 0 chr10 126937316 126937507 -13379258 - Tigger1 DNA MER2_type -1927 491 301 1756 180 0 13 chr10 126937519 126937825 -13378940 - AluJb SINE Alu -10 302 1 13416 184 22 38 chr10 126937974 126939684 -13377081 - L1PA16 LINE L1 -9 6860 5125 1675 193 6 13 chr10 126939684 126939995 -13376770 - AluSx SINE Alu -3 309 1 13416 184 22 38 chr10 126939995 126941297 -13375468 - L1PA16 LINE L1 -1744 5125 3805 2783 123 3 0 chr10 126941297 126941671 -13375094 + THE1C LTR MaLR 1 375 0 13416 184 22 38 chr10 126941671 126945459 -13371306 - L1PA16 LINE L1 -3064 3805 71 1551 167 46 21 chr10 126945459 126945740 -13371025 - Tigger1 DNA MER2_type -2130 288 1 424 297 55 8 chr10 126945743 126945871 -13370894 - MIR SINE MIR -105 157 24 2291 144 9 0 chr10 126946589 126946930 -13369835 - MER2 DNA MER2_type 0 344 1 661 304 219 14 chr10 126946933 126947486 -13369279 + L2 LINE L2 2291 2956 -358 2044 220 58 61 chr10 126947487 126947880 -13368885 + MLT1E2 LTR MaLR 16 408 -218 1676 152 0 4 chr10 126947880 126948136 -13368629 - AluJb SINE Alu -56 256 2 2044 220 58 61 chr10 126948136 126948347 -13368418 + MLT1E2 LTR MaLR 408 618 -8 909 224 58 5 chr10 126948567 126948790 -13367975 + MIR SINE MIR 25 259 -3 1065 227 39 0 chr10 126948823 126949030 -13367735 + MER58A DNA MER1_type 3 217 -7 210 326 35 35 chr10 126949038 126949124 -13367641 + L2 LINE L2 3200 3285 -28 439 235 81 0 chr10 126950537 126950673 -13366092 + MIR SINE MIR 116 262 0 340 279 108 19 chr10 126950930 126951188 -13365577 - L1MC/D LINE L1 -2273 5535 5255 1473 136 86 31 chr10 126951466 126951723 -13365042 - MSTC LTR MaLR -8 420 150 757 299 125 35 chr10 126951766 126952628 -13364137 - L1MC/D LINE L1 -1484 4662 3723 244 62 0 0 chr10 126952660 126952692 -13364073 - MLT1D LTR MaLR 0 505 474 226 163 41 41 chr10 126952689 126952738 -13364027 - MLT1C LTR MaLR -372 95 47 * 2436 60 0 0 chr10 126953174 126953473 -13363292 - L1PA7 LINE L1 -190 5964 5666 291 28 0 0 chr10 126953652 126953688 -13363077 + (CA)n Simple_repeat Simple_repeat 2 37 0 7132 126 51 41 chr10 126953968 126954045 -13362720 + Tigger3b DNA MER2_type 2 77 -2951 2556 64 0 0 chr10 126954045 126954343 -13362422 + AluY SINE Alu 1 298 -13 7132 126 51 41 chr10 126954343 126954620 -13362145 + Tigger3b DNA MER2_type 77 350 -2678 2023 83 7 83 chr10 126954620 126954947 -13361818 + AluSg SINE Alu 3 306 0 7132 126 51 41 chr10 126954947 126955529 -13361236 + Tigger3b DNA MER2_type 350 957 -2071 2104 98 33 20 chr10 126955529 126955834 -13360931 - AluSc SINE Alu 0 309 1 7132 126 51 41 chr10 126955834 126956112 -13360653 + Tigger3b DNA MER2_type 957 1231 0 610 267 10 26 chr10 126956674 126956869 -13359896 + L1ME1 LINE L1 5970 6161 -5 964 259 43 36 chr10 126956885 126957299 -13359466 + L1MC5 LINE L1 7509 7925 -36 2945 123 19 5 chr10 126957318 126957740 -13359025 + MSTA LTR MaLR 1 428 0 1096 238 44 10 chr10 126958085 126958443 -13358322 - MER77 LTR ERV1 -6 599 179 1607 204 74 0 chr10 126958443 126958766 -13357999 + MLT1A1 LTR MaLR 1 347 -18 296 284 0 0 chr10 126958766 126958833 -13357932 + MER52A LTR ERV1 1 67 -1688 713 194 49 7 chr10 126959086 126959230 -13357535 - MER77 LTR ERV1 -415 190 41 394 227 0 0 chr10 126959569 126959644 -13357121 + MER5A DNA MER1_type 1 75 -114 2356 88 0 31 chr10 126959645 126959965 -13356800 + AluSg SINE Alu 1 310 0 973 143 7 0 chr10 126959992 126960139 -13356626 + AluJo SINE Alu 1 148 -164 3115 183 65 25 chr10 126960150 126960823 -13355942 - MER21B LTR ERV1 -149 714 15 1928 159 0 3 chr10 126960826 126961127 -13355638 - AluSx SINE Alu -12 300 1 558 236 74 107 chr10 126962009 126962349 -13354416 - MLT1H LTR MaLR -1 548 81 836 225 118 0 chr10 126962664 126962833 -13353932 + MER5A DNA MER1_type 1 189 0 575 303 32 16 chr10 126963085 126963270 -13353495 + MIR SINE MIR 25 212 -50 2685 159 34 72 chr10 126963304 126963643 -13353122 + MER34B LTR ERV1 5 314 -251 2137 186 16 18 chr10 126963643 126964029 -13352736 - L1PA15 LINE L1 -2 6163 5779 2685 159 34 72 chr10 126964029 126964272 -13352493 + MER34B LTR ERV1 314 565 0 255 149 27 162 chr10 126965294 126965368 -13351397 + MER92B LTR ERV1 1 64 -572 247 246 46 0 chr10 126965465 126965530 -13351235 + MER92C LTR ERV1 484 551 -3 1831 194 86 70 chr10 126966049 126966721 -13350044 + LTR48 LTR ERV1 1 644 0 2103 142 0 0 chr10 126966801 126967096 -13349669 + AluSx SINE Alu 4 298 -14 512 245 35 95 chr10 126967125 126967325 -13349440 - MER92C LTR ERV1 -366 188 1 839 181 190 56 chr10 126967622 126967838 -13348927 - LTR49 LTR ERV1 0 595 378 398 82 0 55 chr10 126967917 126967990 -13348775 + LOR1a LTR ERV1 238 306 -191 881 204 186 34 chr10 126967991 126968255 -13348510 + LOR1a LTR ERV1 194 497 0 326 188 16 0 chr10 126968255 126968319 -13348446 - LTR29 LTR ERV1 -241 381 317 241 200 0 0 chr10 126968500 126968545 -13348220 - Alu SINE Alu -257 45 1 * 562 187 19 9 chr10 126968545 126968650 -13348115 + MLT1C LTR MaLR 362 467 0 441 315 73 45 chr10 126968801 126969182 -13347583 + L1MC4a LINE L1 5520 5911 -1897 1961 109 23 53 chr10 126969210 126969513 -13347252 + AluSg SINE Alu 1 294 -16 593 210 32 70 chr10 126969532 126969598 -13347167 + L1MD2 LINE L1 5995 6062 -297 1917 176 62 28 chr10 126969598 126969951 -13346814 - MLT1A1 LTR MaLR 0 365 1 593 210 32 70 chr10 126969951 126970041 -13346724 + L1MD2 LINE L1 6062 6145 -214 514 183 11 0 chr10 126970070 126970163 -13346602 + L1MD2 LINE L1 6254 6347 -12 1797 179 60 0 chr10 126970756 126971075 -13345690 - MER44D DNA MER2_type 0 609 2 298 165 25 13 chr10 126971233 126971312 -13345453 + C-rich Low_complexity Low_complexity 4 83 0 21 0 0 0 chr10 126972161 126972182 -13344583 + AT_rich Low_complexity Low_complexity 1 21 0 2522 92 48 31 chr10 126972185 126972543 -13344222 - THE1B LTR MaLR 0 364 1 1971 113 7 45 chr10 126973142 126973451 -13343314 - AluY SINE Alu -14 297 1 43576 37 25 2 chr10 126973559 126979427 -13337338 - L1PA3 LINE L1 -144 6011 7 509 306 54 11 chr10 126979482 126979668 -13337097 + MIR3 SINE MIR 15 208 0 205 354 0 0 chr10 126980681 126980746 -13336019 - L2 LINE L2 -954 2360 2296 331 266 11 21 chr10 126980837 126980931 -13335834 - MIR SINE MIR -111 151 59 606 226 189 27 chr10 126981035 126981363 -13335402 - L1MC5 LINE L1 -140 7821 7441 294 162 15 15 chr10 126982344 126982412 -13334353 + MER116 DNA Mariner 1 68 -12 2705 227 128 30 chr10 126982529 126983303 -13333462 - MER21B LTR ERV1 0 863 14 369 160 25 118 chr10 126983298 126983417 -13333348 - MER21B LTR ERV1 -755 108 1 * 223 152 109 0 chr10 126983589 126983635 -13333130 + MIR SINE MIR 119 169 -93 2688 146 31 12 chr10 126983674 126984081 -13332684 + MSTB LTR MaLR 1 418 -8 248 91 23 0 chr10 126984081 126984125 -13332640 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 3872 185 46 9 chr10 126984135 126984925 -13331840 + MSTB-int LTR MaLR 1 819 -832 1501 199 54 62 chr10 126985220 126985608 -13331157 + MST-int LTR MaLR 692 1076 -575 368 133 0 80 chr10 126985608 126985683 -13331082 + MSTB LTR MaLR 358 426 0 222 303 114 8 chr10 126986600 126986732 -13330033 + L2 LINE L2 2633 2778 -536 208 208 0 19 chr10 126986774 126986827 -13329938 + MIR SINE MIR 4 55 -207 * 235 200 0 0 chr10 126986820 126986865 -13329900 + MIR SINE MIR 189 233 -29 203 279 25 13 chr10 126986973 126987052 -13329713 - MIR SINE MIR -49 213 134 223 324 57 29 chr10 126987053 126987158 -13329607 + MER5A DNA MER1_type 18 125 -64 * 519 261 52 33 chr10 126987072 126987225 -13329540 - MER5B DNA MER1_type -22 156 1 311 293 145 80 chr10 126987332 126987670 -13329095 + L2 LINE L2 2910 3269 -3 1435 195 3 36 chr10 126988382 126988684 -13328081 - AluJo SINE Alu -20 292 1 2125 129 0 7 chr10 126989898 126990200 -13326565 - AluSx SINE Alu -12 300 1 23 0 0 0 chr10 126990411 126990434 -13326331 + AT_rich Low_complexity Low_complexity 1 23 0 3826 116 181 64 chr10 126990724 126991605 -13325160 - pTR5 LTR ERV1 0 2606 1524 23 0 0 0 chr10 126991994 126992017 -13324748 + AT_rich Low_complexity Low_complexity 1 23 0 1943 135 34 0 chr10 126992019 126992315 -13324450 - L1MA4A LINE L1 -12 6291 5986 664 206 119 45 chr10 126992393 126992703 -13324062 - HAL1b LINE L1 0 1348 1016 223 173 115 0 chr10 126992910 126992962 -13323803 - L2 LINE L2 -14 3299 3242 358 348 136 18 chr10 126993052 126993449 -13323316 + L2 LINE L2 2829 3272 -41 195 243 0 0 chr10 126994484 126994521 -13322244 + MIR SINE MIR 40 76 -132 428 266 32 16 chr10 126994534 126994658 -13322107 - MER5A DNA MER1_type -34 155 30 2325 119 0 0 chr10 126994972 126995275 -13321490 + AluSx SINE Alu 1 303 -9 465 295 16 25 chr10 126995350 126995594 -13321171 + L1MEd LINE L1 868 1109 -5010 * 483 290 66 36 chr10 126995583 126995964 -13320801 + L1M2 LINE L1 1332 1927 -891 2360 82 0 0 chr10 126995964 126996258 -13320507 + AluSg1 SINE Alu 1 294 -15 483 290 66 36 chr10 126996258 126996283 -13320482 + L1M2 LINE L1 1927 1950 -868 1450 95 95 0 chr10 126996399 126996610 -13320155 - L1PA8 LINE L1 -6 6166 5936 4050 157 27 7 chr10 126996621 126997907 -13318858 - L1PA8 LINE L1 -344 5828 4522 10475 159 14 12 chr10 126997907 126999622 -13317143 - Tigger1 DNA MER2_type -699 1719 1 298 328 86 16 chr10 127001087 127001215 -13315550 + L2 LINE L2 3136 3272 0 274 307 11 11 chr10 127001659 127001747 -13315018 - L1MC4 LINE L1 -196 7846 7759 225 152 0 0 chr10 127001746 127001779 -13314986 - L1MC4 LINE L1 -1307 6735 6703 * 1401 289 121 22 chr10 127001882 127002656 -13314109 - L1MC4a LINE L1 -1340 6468 5618 43 35 0 0 chr10 127003286 127003343 -13313422 + AT_rich Low_complexity Low_complexity 1 57 0 293 268 164 30 chr10 127004777 127005008 -13311757 - L1MC4a LINE L1 -2133 5675 5414 7486 242 61 49 chr10 127005045 127008460 -13308305 + L1MEc LINE L1 1479 4862 -1353 694 275 73 52 chr10 127008603 127009068 -13307697 - L1MC4a LINE L1 -1949 4197 3723 244 62 0 0 chr10 127009100 127009132 -13307633 - MLT1D LTR MaLR 0 505 474 * 286 230 58 23 chr10 127009129 127009216 -13307549 - MLT1C LTR MaLR -372 95 6 817 254 95 37 chr10 127009236 127009531 -13307234 + MLT1I LTR MaLR 36 347 -62 1989 182 37 37 chr10 127009533 127009927 -13306838 - Cheshire DNA MER1_type -1 2419 2023 1429 183 122 4 chr10 127009927 127010189 -13306576 - AluSx SINE Alu -19 293 1 1989 182 37 37 chr10 127010189 127010229 -13306536 - Cheshire DNA MER1_type -396 2024 1985 424 241 120 0 chr10 127010474 127010582 -13306183 + MIR SINE MIR 8 128 -134 700 110 37 0 chr10 127010617 127010726 -13306039 - Cheshire DNA MER1_type -761 1659 1547 241 132 0 0 chr10 127010812 127010850 -13305915 + MLT1I LTR MaLR 348 385 -24 234 0 0 0 chr10 127010862 127010888 -13305877 + (TG)n Simple_repeat Simple_repeat 1 26 0 7324 51 9 11 chr10 127011116 127012717 -13304048 - SVA Other Other -723 1366 1 669 267 30 0 chr10 127012805 127012970 -13303795 - MER3 DNA MER1_type -7 202 33 5929 91 39 52 chr10 127013144 127014738 -13302027 - SVA Other Other -518 1130 1 822 260 26 0 chr10 127014827 127015019 -13301746 - MER3 DNA MER1_type -7 202 6 24 0 0 0 chr10 127015092 127015116 -13301649 + AT_rich Low_complexity Low_complexity 1 24 0 2447 74 3 3 chr10 127015227 127015526 -13301239 - AluSp SINE Alu -14 299 1 443 228 110 75 chr10 127015600 127015611 -13301154 - L1MC4a LINE L1 -2987 3159 3150 2205 115 3 0 chr10 127015611 127015906 -13300859 - AluSx SINE Alu -16 296 1 443 228 110 75 chr10 127015906 127016301 -13300464 - L1MC4a LINE L1 -2996 3150 2729 1848 187 157 15 chr10 127016301 127016772 -13299993 - MLT1F LTR MaLR -4 538 1 443 228 110 75 chr10 127016772 127016873 -13299892 - L1MC4a LINE L1 -3417 2729 2633 1539 222 116 22 chr10 127016931 127017437 -13299328 - L1MC4a LINE L1 -3400 2746 2186 2245 122 0 0 chr10 127017437 127017740 -13299025 - AluSc SINE Alu -6 303 1 1539 222 116 22 chr10 127017740 127017770 -13298995 - L1MC4a LINE L1 -3960 2186 2160 858 277 25 25 chr10 127017904 127018178 -13298587 - MLT1J LTR MaLR -2 509 236 338 253 93 43 chr10 127018461 127018623 -13298142 - L1M4 LINE L1 -3769 2377 2208 235 249 12 87 chr10 127018687 127018860 -13297905 - HAL1 LINE L1 -1455 1052 893 1328 109 0 26 chr10 127019431 127019624 -13297141 - AluSq SINE Alu -125 188 1 786 212 88 34 chr10 127019673 127019912 -13296853 - MIR SINE MIR -17 245 2 1045 196 40 0 chr10 127021091 127021290 -13295475 + MER20 DNA MER1_type 10 216 -3 440 298 25 85 chr10 127022287 127022437 -13294328 + MIR SINE MIR 13 146 -116 3222 128 4 16 chr10 127022437 127022546 -13294219 + L1MB2 LINE L1 5683 5792 -379 2504 135 8 27 chr10 127022546 127022917 -13293848 + THE1B LTR MaLR 1 364 0 3222 128 4 16 chr10 127022917 127023301 -13293464 + L1MB2 LINE L1 5792 6170 -1 440 298 25 85 chr10 127023301 127023385 -13293380 + MIR SINE MIR 146 233 -29 205 352 28 0 chr10 127024414 127024522 -13292243 - MIR3 SINE MIR 0 208 98 1077 218 0 5 chr10 127025533 127025744 -13291021 - MER58B DNA MER1_type -8 333 124 9159 115 4 32 chr10 127025745 127026390 -13290375 - Tigger1 DNA MER2_type -2 2416 1755 2207 93 25 0 chr10 127026390 127026670 -13290095 + AluSx SINE Alu 3 289 -23 9159 115 4 32 chr10 127026670 127027405 -13289360 - Tigger1 DNA MER2_type -663 1755 1074 2392 90 0 0 chr10 127027555 127027856 -13288909 - AluY SINE Alu -10 301 1 25 31 0 0 chr10 127028028 127028060 -13288705 + AT_rich Low_complexity Low_complexity 1 32 0 316 330 73 34 chr10 127028376 127028555 -13288210 + L3 LINE CR1 1344 1529 -48 184 261 0 0 chr10 127028704 127028750 -13288015 - MIR SINE MIR 0 262 217 270 0 0 0 chr10 127029043 127029073 -13287692 + (A)n Simple_repeat Simple_repeat 1 30 0 2496 102 36 30 chr10 127030816 127031178 -13285587 - THE1B LTR MaLR 0 364 1 259 269 135 36 chr10 127031484 127031677 -13285088 - MLT1G LTR MaLR -24 518 307 312 203 0 0 chr10 127031723 127031782 -13284983 - MLT1G LTR MaLR -316 274 216 622 149 28 105 chr10 127031784 127031852 -13284913 - MLT1C LTR MaLR 0 467 395 1616 148 101 11 chr10 127031852 127032130 -13284635 + AluJb SINE Alu 1 303 -9 522 98 0 0 chr10 127032132 127032214 -13284551 + (CA)n Simple_repeat Simple_repeat 1 82 0 622 149 28 105 chr10 127032214 127032324 -13284441 - MLT1C LTR MaLR -73 394 215 4121 163 39 12 chr10 127032756 127033189 -13283576 + L1MB7 LINE L1 5438 5899 -285 1638 78 0 14 chr10 127033189 127033406 -13283359 + AluY SINE Alu 98 311 0 4121 163 39 12 chr10 127033406 127033692 -13283073 + L1MB7 LINE L1 5899 6176 -8 271 194 65 0 chr10 127033776 127033838 -13282927 - MER69 DNA AcHobo -3 2523 2458 24 0 0 0 chr10 127034056 127034080 -13282685 + AT_rich Low_complexity Low_complexity 1 24 0 2466 74 3 3 chr10 127034191 127034490 -13282275 - AluSp SINE Alu -14 299 1 394 228 110 75 chr10 127034564 127034575 -13282190 - L1M4 LINE L1 -2987 3159 3150 2192 115 3 3 chr10 127034575 127034871 -13281894 - AluSx SINE Alu -16 296 1 394 228 110 75 chr10 127034871 127035266 -13281499 - L1M4 LINE L1 -2996 3150 2729 1690 185 157 15 chr10 127035266 127035737 -13281028 - MLT1F LTR MaLR -4 538 1 394 228 110 75 chr10 127035737 127035838 -13280927 - L1M4 LINE L1 -3417 2729 2633 1512 225 114 20 chr10 127035896 127036402 -13280363 - L1M4 LINE L1 -3400 2746 2186 2258 122 0 0 chr10 127036402 127036705 -13280060 - AluSc SINE Alu -6 303 1 1512 225 114 20 chr10 127036705 127036735 -13280030 - L1M4 LINE L1 -3960 2186 2160 857 277 25 25 chr10 127036869 127037143 -13279622 - MLT1J LTR MaLR -2 509 236 314 253 93 43 chr10 127037426 127037588 -13279177 - L1M4 LINE L1 -3769 2377 2208 232 249 12 87 chr10 127037652 127037825 -13278940 - HAL1 LINE L1 -1455 1052 893 24 0 0 0 chr10 127038775 127038799 -13277966 + AT_rich Low_complexity Low_complexity 1 24 0 1513 179 218 107 chr10 127039552 127040235 -13276530 + LTR41 LTR ERVL 8 766 -7 394 283 166 21 chr10 127040633 127040820 -13275945 + MIR SINE MIR 46 259 -3 200 328 111 15 chr10 127041068 127041266 -13275499 + L2 LINE L2 2605 2821 -493 3331 180 34 52 chr10 127042469 127043232 -13273533 - LTR1B LTR ERV1 -77 749 1 2277 108 0 0 chr10 127043728 127044023 -13272742 + AluSg SINE Alu 1 295 -15 210 355 66 51 chr10 127044387 127044584 -13272181 - L2 LINE L2 -54 3218 3019 334 220 184 0 chr10 127044649 127044758 -13272007 - MIR3 SINE MIR -7 201 73 1491 186 140 66 chr10 127044948 127045404 -13271361 - MLT1D LTR MaLR -2 503 14 431 289 91 16 chr10 127045415 127045657 -13271108 + L3 LINE CR1 986 1245 -332 190 355 21 11 chr10 127045928 127046021 -13270744 - L2 LINE L2 -528 2786 2693 2355 140 42 35 chr10 127046324 127046730 -13270035 - Tigger2a DNA MER2_type 0 434 26 1387 236 47 99 chr10 127047234 127047847 -13268918 - L1ME3A LINE L1 -5 6165 5585 201 215 152 38 chr10 127047993 127048072 -13268693 - MIR SINE MIR -10 252 165 313 188 12 38 chr10 127048088 127048168 -13268597 - MIR SINE MIR -67 195 118 355 258 70 8 chr10 127049055 127049183 -13267582 - L2 LINE L2 -10 3262 3127 180 0 0 0 chr10 127049300 127049320 -13267445 + (TC)n Simple_repeat Simple_repeat 2 21 0 1778 157 0 0 chr10 127049320 127049582 -13267183 - AluSx SINE Alu -13 299 38 388 248 120 8 chr10 127049618 127049751 -13267014 - LTR16C LTR ERVL 0 491 344 901 210 177 64 chr10 127049751 127050079 -13266686 + MLT1A1 LTR MaLR 1 365 0 557 288 142 9 chr10 127050082 127050308 -13266457 - LTR16C LTR ERVL -146 345 90 642 125 17 58 chr10 127051748 127051868 -13264897 + AluSg/x SINE Alu 192 306 -4 189 0 0 0 chr10 127051901 127051922 -13264843 + (TTTTA)n Simple_repeat Simple_repeat 4 24 0 3906 24 0 0 chr10 127051923 127052373 -13264392 - L1PA3 LINE L1 -1 6154 5705 957 148 55 22 chr10 127052959 127053142 -13263623 - MER53 DNA DNA 0 189 1 203 267 67 56 chr10 127053186 127053276 -13263489 - MIR3 SINE MIR -2 206 116 1749 167 133 16 chr10 127053539 127053922 -13262843 - MSTA LTR MaLR 0 428 1 33 0 0 0 chr10 127054843 127054876 -13261889 + AT_rich Low_complexity Low_complexity 1 33 0 709 35 0 0 chr10 127054876 127054962 -13261803 - L1PA3 LINE L1 -3 6152 6067 1858 180 10 48 chr10 127055846 127056143 -13260622 - L1MA4 LINE L1 -212 6088 5810 1764 52 69 76 chr10 127056143 127056433 -13260332 + AluY SINE Alu 1 288 -23 1858 180 10 48 chr10 127056433 127056547 -13260218 - L1MA4 LINE L1 -490 5810 5693 904 37 0 0 chr10 127058225 127058332 -13258433 + L1PA5 LINE L1 6048 6154 0 197 193 0 18 chr10 127059585 127059642 -13257123 + GA-rich Low_complexity Low_complexity 5 60 0 220 367 82 14 chr10 127060855 127061002 -13255763 - MIR SINE MIR -86 176 20 582 219 9 9 chr10 127061997 127062111 -13254654 - MER7A DNA MER2_type -234 112 1 5266 166 13 25 chr10 127062111 127063197 -13253568 - L1MA8 LINE L1 -33 6258 5185 2870 212 67 47 chr10 127063541 127064287 -13252478 + L1ME1 LINE L1 5123 5897 -269 1583 182 39 33 chr10 127064287 127064650 -13252115 - MLT1A1 LTR MaLR 0 365 1 2870 212 67 47 chr10 127064650 127064923 -13251842 + L1ME1 LINE L1 5897 6163 -3 197 224 255 31 chr10 127064969 127065067 -13251698 + MIR SINE MIR 13 132 -130 287 245 160 0 chr10 127065110 127065204 -13251561 + MIR SINE MIR 137 245 -17 637 210 42 0 chr10 127066430 127066573 -13250192 - MIR SINE MIR -50 212 64 240 214 0 0 chr10 127066760 127066816 -13249949 + (TG)n Simple_repeat Simple_repeat 1 56 0 251 167 0 37 chr10 127066823 127066877 -13249888 + MER4-int LTR ERV1 1111 1162 -5436 204 244 0 0 chr10 127066880 127066921 -13249844 + (TATG)n Simple_repeat Simple_repeat 4 44 0 251 167 0 37 chr10 127066921 127066975 -13249790 + MER4-int LTR ERV1 1111 1162 -5436 225 310 0 0 chr10 127066976 127067034 -13249731 + (TG)n Simple_repeat Simple_repeat 1 58 0 221 233 0 33 chr10 127068859 127068919 -13247846 - L2 LINE L2 0 3272 3215 2303 213 40 40 chr10 127069004 127069558 -13247207 + MLT2B3 LTR ERVL 1 554 0 501 204 10 0 chr10 127069567 127069665 -13247100 - AluSp/q SINE Alu -4 309 211 1562 93 5 0 chr10 127069818 127070012 -13246753 - AluSq SINE Alu -117 196 2 622 319 57 9 chr10 127070888 127071223 -13245542 - L2 LINE L2 -352 2962 2612 4285 76 36 0 chr10 127071270 127071846 -13244919 + L1PA10 LINE L1 5570 6166 -2 2468 68 7 0 chr10 127072214 127072509 -13244256 + AluSq SINE Alu 1 297 -16 243 0 0 0 chr10 127073267 127073294 -13243471 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1427 157 30 17 chr10 127073706 127074005 -13242760 + L1MA5A LINE L1 5991 6293 -4 266 146 146 0 chr10 127074127 127074182 -13242583 - MLT1A2 LTR MaLR -4 370 308 5152 203 24 11 chr10 127074182 127075290 -13241475 + L1PA15 LINE L1 4146 5267 -879 3752 107 56 5 chr10 127075329 127075882 -13240883 - MER11C LTR ERVK -14 1057 477 5271 138 16 7 chr10 127076387 127076416 -13240349 + L1PA15 LINE L1 5276 5303 -862 1885 52 39 0 chr10 127076416 127076649 -13240116 - L1PA7 LINE L1 -18 6136 5895 5271 138 16 7 chr10 127076649 127077492 -13239273 + L1PA15 LINE L1 5303 6156 -9 1172 191 39 76 chr10 127077529 127077859 -13238906 - MLT1A2 LTR MaLR -56 318 1 265 244 171 8 chr10 127078062 127078185 -13238580 - MIR SINE MIR -11 251 109 200 204 61 0 chr10 127080048 127080097 -13236668 + CT-rich Low_complexity Low_complexity 5 56 0 1465 211 54 76 chr10 127081226 127081742 -13235023 - MLT1D LTR MaLR 0 505 1 666 200 90 0 chr10 127083219 127083374 -13233391 - MER5A DNA MER1_type 0 189 21 2298 95 20 0 chr10 127083724 127084018 -13232747 + AluSx SINE Alu 1 300 -12 2402 74 0 7 chr10 127084557 127084855 -13231910 - AluY SINE Alu -15 296 1 228 67 0 0 chr10 127085560 127085590 -13231175 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 196 310 0 17 chr10 127086217 127086275 -13230490 + L2 LINE L2 3200 3256 -16 305 254 152 0 chr10 127086432 127086591 -13230174 + MIR SINE MIR 18 210 -52 488 220 28 104 chr10 127087199 127087381 -13229384 - MIR3 SINE MIR -6 202 35 2849 136 36 0 chr10 127087450 127087861 -13228904 - MSTA LTR MaLR 0 428 3 610 296 40 24 chr10 127088477 127088730 -13228035 + MIR SINE MIR 5 261 -1 1061 269 73 64 chr10 127088859 127089421 -13227344 + MLT2F LTR ERVL 6 572 -91 467 235 0 0 chr10 127089549 127089634 -13227131 + ERVL LTR ERVL 3376 3460 -2304 * 916 214 143 89 chr10 127089630 127089812 -13226953 + ERVL LTR ERVL 5309 5480 -284 1560 187 13 27 chr10 127089812 127089995 -13226770 - AluJb SINE Alu -15 297 118 228 35 0 0 chr10 127089995 127090024 -13226741 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1560 187 13 27 chr10 127090024 127090139 -13226626 - AluJb SINE Alu -194 118 3 916 214 143 89 chr10 127090139 127090382 -13226383 + ERVL LTR ERVL 5480 5757 -7 453 238 61 37 chr10 127090283 127090447 -13226318 + Ricksha DNA DNA 249 416 -2830 * 859 271 33 0 chr10 127091553 127091767 -13224998 - MIR SINE MIR -21 241 21 385 311 85 6 chr10 127091924 127092088 -13224677 - MIR SINE MIR -5 257 81 201 324 0 40 chr10 127092435 127092509 -13224256 - L2 LINE L2 0 3272 3202 * 236 277 11 64 chr10 127092505 127092552 -13224213 + MIR SINE MIR 155 196 -66 2883 139 12 2 chr10 127092552 127092976 -13223789 - MSTA LTR MaLR 0 428 1 236 277 11 64 chr10 127092976 127093022 -13223743 + MIR SINE MIR 196 243 -19 480 185 28 28 chr10 127093120 127093228 -13223537 - MIR SINE MIR -82 180 73 1207 182 18 36 chr10 127094567 127094787 -13221978 - MER20 DNA MER1_type -3 216 1 2908 76 2 78 chr10 127094870 127095278 -13221487 + MER51B LTR ERV1 1 377 0 920 157 25 19 chr10 127095395 127095554 -13221211 + MER4D LTR ERV1 1 160 -712 3417 121 36 63 chr10 127095557 127096175 -13220590 + MER4D LTR ERV1 272 872 0 246 336 80 0 chr10 127096487 127096600 -13220165 - MLT1K LTR MaLR -464 124 3 237 256 44 44 chr10 127096607 127096697 -13220068 + MIR SINE MIR 117 206 -56 202 300 185 23 chr10 127097912 127098042 -13218723 - L2 LINE L2 0 3272 3122 268 296 176 11 chr10 127098240 127098416 -13218349 - L2 LINE L2 -420 2894 2690 655 301 0 12 chr10 127099139 127099312 -13217453 + MIR SINE MIR 19 189 -73 3766 240 42 29 chr10 127099430 127101305 -13215460 - L1MEc LINE L1 -3288 2927 1047 826 176 0 8 chr10 127101307 127101432 -13215333 - FLAM_A SINE Alu -9 124 1 2434 283 31 6 chr10 127101432 127102133 -13214632 - L1MEc LINE L1 -5643 753 35 1930 154 8 59 chr10 127102413 127102771 -13213994 - MER2 DNA MER2_type -3 341 2 235 318 39 0 chr10 127104167 127104296 -13212469 + MLT1K LTR MaLR 126 259 -329 271 320 176 13 chr10 127105339 127105380 -13211385 - MIR3 SINE MIR 0 208 175 1081 241 18 0 chr10 127105380 127105600 -13211165 - MER58A DNA MER1_type 0 224 1 271 320 176 13 chr10 127105600 127105711 -13211054 - MIR3 SINE MIR -33 175 31 22 0 0 0 chr10 127106472 127106494 -13210271 + AT_rich Low_complexity Low_complexity 1 22 0 1083 234 18 9 chr10 127107309 127107531 -13209234 + MER58A DNA MER1_type 1 224 0 2211 97 0 7 chr10 127108405 127108693 -13208072 + THE1B LTR MaLR 78 363 -1 424 325 80 0 chr10 127108739 127108890 -13207875 - MIR SINE MIR -5 257 95 252 300 126 32 chr10 127108894 127109084 -13207681 - L2 LINE L2 0 3313 3106 184 138 0 69 chr10 127109399 127109457 -13207308 + (TTCC)n Simple_repeat Simple_repeat 1 54 0 50 31 0 0 chr10 127109518 127109582 -13207183 + AT_rich Low_complexity Low_complexity 1 64 0 34 55 0 0 chr10 127109812 127109867 -13206898 + AT_rich Low_complexity Low_complexity 1 55 0 214 200 18 55 chr10 127109997 127110052 -13206713 - L2 LINE L2 -81 3232 3180 1540 236 76 14 chr10 127110624 127111056 -13205709 - MLT1C LTR MaLR -8 459 1 657 304 87 43 chr10 127111059 127111810 -13204955 + L2 LINE L2 2520 3313 0 220 204 0 0 chr10 127112335 127112379 -13204386 - MIR SINE MIR -75 187 144 290 247 48 96 chr10 127112724 127112890 -13203875 - MLT1L LTR MaLR -6 609 452 21 0 0 0 chr10 127114762 127114783 -13201982 + AT_rich Low_complexity Low_complexity 1 21 0 527 245 35 14 chr10 127115247 127115390 -13201375 - MIR SINE MIR -115 147 2 710 178 0 8 chr10 127116044 127116173 -13200592 + LTR5 LTR ERVK 3 130 -839 592 238 138 44 chr10 127116197 127116378 -13200387 - MER63A DNA MER1_type -7 203 6 1968 186 70 52 chr10 127117815 127118299 -13198466 + MLT1D LTR MaLR 13 505 0 21 36 0 0 chr10 127119025 127119053 -13197712 + AT_rich Low_complexity Low_complexity 1 28 0 348 371 140 0 chr10 127119717 127120073 -13196692 - L1MC4a LINE L1 -1882 5926 5521 925 264 56 4 chr10 127120094 127120344 -13196421 - MER68 LTR ERV1 0 562 300 2142 123 16 0 chr10 127120344 127120712 -13196053 - AluSq SINE Alu 0 373 1 536 239 60 123 chr10 127120716 127121050 -13195715 - MER68 LTR ERV1 -248 314 2 287 212 21 28 chr10 127121058 127121152 -13195613 - L1MC4a LINE L1 -672 5494 5399 231 249 55 55 chr10 127121169 127121334 -13195431 - L1MC4a LINE L1 -786 5360 5196 1358 274 37 26 chr10 127121408 127121865 -13194900 - MLT1C LTR MaLR 0 467 6 339 294 8 0 chr10 127121870 127121989 -13194776 - L1MC4a LINE L1 -2241 3905 3786 222 37 0 0 chr10 127122039 127122066 -13194699 + (TG)n Simple_repeat Simple_repeat 1 27 0 2058 114 7 36 chr10 127122084 127122452 -13194313 - AluSx SINE Alu 0 371 13 253 269 186 6 chr10 127122452 127122608 -13194157 - L1MC4a LINE L1 -2384 3762 3579 272 315 116 7 chr10 127122633 127122779 -13193986 + MIR SINE MIR 101 262 0 407 19 19 0 chr10 127123056 127123108 -13193657 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 322 319 83 30 chr10 127123389 127123558 -13193207 - MIR SINE MIR -1 261 84 518 249 35 56 chr10 127124920 127125117 -13191648 + MER117 DNA MER1_type 4 196 -1 267 232 87 14 chr10 127126540 127126609 -13190156 - L2 LINE L2 -88 3184 3111 288 223 161 18 chr10 127126629 127126741 -13190024 + L2 LINE L2 2453 2580 -734 184 260 140 30 chr10 127126747 127126847 -13189918 + L2 LINE L2 2783 2893 -421 1234 162 57 0 chr10 127126855 127127065 -13189700 - MER46A DNA MER2_type -14 222 1 274 274 132 0 chr10 127127068 127127174 -13189591 + L2 LINE L2 2946 3065 -248 420 20 0 0 chr10 127127206 127127255 -13189510 + (TA)n Simple_repeat Simple_repeat 2 50 0 396 119 0 0 chr10 127127255 127127314 -13189451 - L1MB3 LINE L1 -35 6148 6090 563 288 33 63 chr10 127127367 127127473 -13189292 + L2 LINE L2 3051 3159 -154 15884 131 21 14 chr10 127127473 127129750 -13187015 + Tigger1 DNA MER2_type 3 2300 -118 2470 88 0 0 chr10 127129750 127130057 -13186708 - AluY SINE Alu -4 307 1 15884 131 21 14 chr10 127130057 127130177 -13186588 + Tigger1 DNA MER2_type 2300 2418 0 563 288 33 63 chr10 127130177 127130341 -13186424 + L2 LINE L2 3159 3313 0 216 251 63 48 chr10 127130434 127130557 -13186208 - L2 LINE L2 -263 3050 2925 2078 122 4 0 chr10 127131239 127131518 -13185247 + AluSg SINE Alu 1 280 -30 285 29 0 0 chr10 127131524 127131558 -13185207 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 251 314 102 17 chr10 127131558 127131676 -13185089 + MIR SINE MIR 25 152 -56 568 208 0 0 chr10 127132401 127132502 -13184263 - FLAM_A SINE Alu -41 101 1 531 106 82 0 chr10 127132533 127132618 -13184147 - L1MA5A LINE L1 -10 6287 6196 700 274 102 26 chr10 127132819 127133122 -13183643 + L1ME LINE L1 5493 5818 -352 1080 282 190 10 chr10 127133141 127133704 -13183061 + L1ME3 LINE L1 5293 5951 -219 369 284 71 41 chr10 127134706 127134875 -13181890 + L1M4 LINE L1 4151 4324 -1822 234 91 0 0 chr10 127135477 127135510 -13181255 + MER3 DNA MER1_type 17 49 -160 312 221 0 13 chr10 127135600 127135677 -13181088 + L1ME3 LINE L1 6086 6161 -1 233 297 116 43 chr10 127135683 127135821 -13180944 - MER5A DNA MER1_type -2 187 40 1437 150 0 0 chr10 127136397 127136624 -13180141 + AluSg/x SINE Alu 82 308 -2 1789 217 88 9 chr10 127136833 127137338 -13179427 - MLT1F LTR MaLR -3 539 6 617 277 153 22 chr10 127137673 127137738 -13179027 + MLT1L LTR MaLR 137 192 -423 619 123 297 77 chr10 127137738 127137816 -13178949 - MER5A DNA MER1_type 0 189 129 1774 85 0 0 chr10 127137816 127138040 -13178725 - AluSg/x SINE Alu -4 306 83 619 123 297 77 chr10 127138040 127138116 -13178649 - MER5A DNA MER1_type -60 129 1 617 277 153 22 chr10 127138116 127138454 -13178311 + MLT1L LTR MaLR 192 593 -22 419 289 89 17 chr10 127138488 127138694 -13178071 - L1MC/D LINE L1 -551 5570 5383 369 0 0 0 chr10 127139466 127139507 -13177258 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 327 73 42 chr10 127140057 127140222 -13176543 - L2 LINE L2 -278 2994 2825 253 152 43 0 chr10 127140425 127140471 -13176294 - HERVK3 LTR ERVK -7195 48 1 2213 155 45 15 chr10 127140493 127140893 -13175872 - LTR3 LTR ERVK -16 416 5 392 298 98 22 chr10 127140935 127141210 -13175555 - L1ME4a LINE L1 -218 5903 5608 1920 168 35 26 chr10 127141927 127142272 -13174493 + MER7A DNA MER2_type 1 346 0 28 29 0 0 chr10 127142563 127142598 -13174167 + AT_rich Low_complexity Low_complexity 1 35 0 180 111 0 0 chr10 127143108 127143135 -13173630 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 468 0 0 0 chr10 127143619 127143671 -13173094 + (TA)n Simple_repeat Simple_repeat 2 53 0 18937 177 70 63 chr10 127143720 127143805 -13172960 + L1M1 LINE L1 12 95 -7576 183 42 0 0 chr10 127143805 127143829 -13172936 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 18937 177 70 63 chr10 127143829 127145189 -13171576 + L1M1 LINE L1 95 1444 -6227 198 0 0 0 chr10 127145189 127145211 -13171554 + (GA)n Simple_repeat Simple_repeat 2 23 0 18937 177 70 63 chr10 127145211 127148317 -13168448 + L1M1 LINE L1 1444 4527 -3144 1145 133 0 12 chr10 127148317 127148482 -13168283 - AluSx SINE Alu -13 299 137 306 73 0 0 chr10 127148483 127148524 -13168241 + AluSg/x SINE Alu 153 193 -109 18937 177 70 63 chr10 127148524 127148540 -13168225 + L1M1 LINE L1 4527 4541 -3130 971 113 0 0 chr10 127148540 127148673 -13168092 - AluSx SINE Alu -180 133 1 18937 177 70 63 chr10 127148673 127150639 -13166126 + L1M1 LINE L1 4541 6928 -743 261 182 0 0 chr10 127152625 127152680 -13164085 + (TA)n Simple_repeat Simple_repeat 2 56 0 1486 148 130 125 chr10 127152835 127153228 -13163537 + MLT2C1 LTR ERVL 1 395 -2 2387 73 3 0 chr10 127153485 127153786 -13162979 - AluY SINE Alu -9 302 1 2077 135 0 13 chr10 127153904 127154259 -13162506 - AluSx SINE Alu 0 312 2 613 181 0 0 chr10 127154269 127154363 -13162402 - AluSc SINE Alu -99 210 117 814 195 0 0 chr10 127155259 127155408 -13161357 + L1 LINE L1 4522 4670 -1476 270 264 88 11 chr10 127155408 127155499 -13161266 - LTR67 LTR ERVL -31 526 429 367 260 47 31 chr10 127155887 127156014 -13160751 - MIR SINE MIR -100 162 34 1279 236 32 35 chr10 127156077 127156425 -13160340 - MLT1A2 LTR MaLR -2 372 26 442 74 12 111 chr10 127156587 127156668 -13160097 - L1PA14 LINE L1 -221 5940 5868 * 2388 111 3 0 chr10 127156664 127156988 -13159777 + L1P4 LINE L1 5441 5765 -398 421 296 16 16 chr10 127157887 127158012 -13158753 + L2 LINE L2 3143 3267 -5 1613 167 3 13 chr10 127158082 127158382 -13158383 - AluSg SINE Alu -9 301 5 801 92 0 0 chr10 127158992 127159139 -13157626 + AluSg/x SINE Alu 187 333 0 266 311 39 10 chr10 127159140 127159243 -13157522 - MIR SINE MIR -150 112 7 252 357 0 24 chr10 127159417 127159543 -13157222 + MIR SINE MIR 3 125 -137 191 330 11 33 chr10 127159641 127159732 -13157033 + L2 LINE L2 3224 3312 -1 314 299 70 64 chr10 127160592 127160906 -13155859 + L2 LINE L2 2185 2500 -814 408 231 119 86 chr10 127162889 127163158 -13153607 + L1M4 LINE L1 3022 3299 -2847 1151 188 0 5 chr10 127164139 127164346 -13152419 - AluJb SINE Alu -106 206 1 1641 177 7 7 chr10 127164537 127164836 -13151929 - AluY SINE Alu -12 299 1 491 32 0 32 chr10 127165356 127165418 -13151347 + L1PA8 LINE L1 6105 6164 -8 182 62 31 0 chr10 127166440 127166472 -13150293 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 315 29 0 0 chr10 127166472 127166507 -13150258 - L1PA6 LINE L1 -23 6131 6097 406 289 78 74 chr10 127166507 127166749 -13150016 - MLT1J LTR MaLR -45 466 224 2279 110 0 0 chr10 127167146 127167445 -13149320 - AluSx SINE Alu -13 299 1 1762 193 20 0 chr10 127167610 127167911 -13148854 + MLT1A1 LTR MaLR 1 307 -58 830 103 32 0 chr10 127167911 127168037 -13148728 + L1MA1 LINE L1 6068 6197 -105 2132 146 43 13 chr10 127168077 127168453 -13148312 + L1PB4 LINE L1 5769 6155 -1 310 182 0 0 chr10 127168515 127168570 -13148195 + MLT1A1 LTR MaLR 301 355 -10 186 291 25 38 chr10 127168594 127168673 -13148092 + L2 LINE L2 3125 3202 -70 241 146 21 42 chr10 127169355 127169403 -13147362 - MLT2E LTR ERVL -2 395 349 456 19 0 0 chr10 127169412 127169465 -13147300 + (CA)n Simple_repeat Simple_repeat 2 54 0 428 211 0 0 chr10 127169466 127169556 -13147209 - MLT2C1 LTR ERVL -306 91 2 269 229 72 12 chr10 127169800 127169883 -13146882 - MER5A DNA MER1_type -14 175 88 * 350 195 228 16 chr10 127169810 127169933 -13146832 + MER5A DNA MER1_type 35 183 -6 1621 162 12 58 chr10 127170064 127170391 -13146374 - AluJo SINE Alu 0 312 1 2078 199 105 33 chr10 127170506 127171019 -13145746 - MER44D DNA MER2_type 0 605 1 184 312 65 110 chr10 127171286 127171440 -13145325 - L2 LINE L2 -8 3264 3118 589 249 40 28 chr10 127173535 127173712 -13143053 + MER5A DNA MER1_type 7 185 -4 663 232 7 39 chr10 127174050 127174205 -13142560 - MER5A DNA MER1_type -8 181 32 1454 195 117 89 chr10 127174557 127175105 -13141660 - MER34B LTR ERV1 -2 563 1 224 226 0 38 chr10 127175114 127175167 -13141598 + CT-rich Low_complexity Low_complexity 3 53 0 2486 59 0 7 chr10 127176452 127176757 -13140008 - AluY SINE Alu -8 303 1 28 0 0 0 chr10 127177480 127177508 -13139257 + AT_rich Low_complexity Low_complexity 1 28 0 323 293 30 10 chr10 127177840 127177939 -13138826 - MIR SINE MIR -62 146 46 449 215 59 52 chr10 127179432 127179567 -13137198 + MIR SINE MIR 127 262 0 248 258 145 16 chr10 127179558 127179682 -13137083 + L2 LINE L2 3174 3313 0 * 2736 118 3 6 chr10 127179699 127180064 -13136701 - THE1B LTR MaLR 0 364 1 861 263 48 25 chr10 127180282 127180566 -13136199 - MLT2E LTR ERVL -334 294 3 1294 217 133 26 chr10 127181846 127182311 -13134454 - L1ME3A LINE L1 -2 6168 5623 195 42 0 0 chr10 127182724 127182748 -13134017 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 1728 157 16 20 chr10 127182766 127183072 -13133693 - AluJo SINE Alu -7 305 1 1525 195 63 47 chr10 127183741 127184188 -13132577 - MLT1C LTR MaLR -8 459 6 2183 105 3 10 chr10 127184625 127184930 -13131835 + AluSg SINE Alu 1 303 -7 757 244 90 71 chr10 127185000 127185315 -13131450 - LTR33 LTR ERVL -7 514 190 1908 127 130 27 chr10 127185315 127185645 -13131120 + THE1B LTR MaLR 1 364 0 757 244 90 71 chr10 127185645 127185694 -13131071 - LTR33 LTR ERVL -331 190 143 24 67 0 0 chr10 127186174 127186219 -13130546 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr10 127186877 127186898 -13129867 + AT_rich Low_complexity Low_complexity 1 21 0 195 161 0 0 chr10 127188661 127188692 -13128073 + L2 LINE L2 3023 3053 -219 306 0 0 0 chr10 127189413 127189447 -13127318 + (TG)n Simple_repeat Simple_repeat 2 35 0 5605 119 19 22 chr10 127189447 127190861 -13125904 + L1PA16 LINE L1 4740 6157 -9 184 129 65 0 chr10 127192108 127192139 -13124626 - MIR SINE MIR -141 67 35 1518 283 39 55 chr10 127192387 127193097 -13123668 + MER21B LTR ERV1 11 709 -154 407 91 0 0 chr10 127194053 127194108 -13122657 - Alu SINE Alu -248 55 1 232 213 66 0 chr10 127194219 127194280 -13122485 - MER5B DNA MER1_type -113 65 1 2662 100 11 3 chr10 127194610 127194971 -13121794 - THE1B LTR MaLR 0 364 1 23 68 0 0 chr10 127195452 127195496 -13121269 + AT_rich Low_complexity Low_complexity 1 44 0 222 62 0 0 chr10 127195647 127195679 -13121086 + (CA)n Simple_repeat Simple_repeat 2 33 0 423 261 70 0 chr10 127196866 127197023 -13119742 + MIR SINE MIR 19 186 -76 272 312 94 25 chr10 127197171 127197373 -13119392 + MIR SINE MIR 33 248 -14 544 278 123 74 chr10 127197979 127198873 -13117892 - L2 LINE L2 -8 3305 2368 2842 7 0 0 chr10 127199863 127200163 -13116602 + AluYa5 SINE Alu 1 300 -11 2107 203 33 13 chr10 127200519 127200977 -13115788 + MLT1C LTR MaLR 1 467 0 646 297 51 63 chr10 127201503 127201917 -13114848 + L1MC/D LINE L1 5394 5802 -2006 1834 217 89 60 chr10 127201948 127202293 -13114472 + L1ME3A LINE L1 5531 5903 -267 1216 177 44 0 chr10 127202293 127202519 -13114246 + MER46A DNA MER2_type 1 236 0 1834 217 89 60 chr10 127202519 127202790 -13113975 + L1ME3A LINE L1 5903 6165 -5 4702 154 63 6 chr10 127202790 127203504 -13113261 + L1MB4 LINE L1 5258 6032 -148 954 114 0 7 chr10 127203504 127203644 -13113121 - MER85 DNA T2_type 0 139 1 4702 154 63 6 chr10 127203644 127203801 -13112964 + L1MB4 LINE L1 6032 6179 -1 594 103 0 0 chr10 127204463 127204550 -13112215 + (GA)n Simple_repeat Simple_repeat 2 88 0 1113 204 24 52 chr10 127205195 127205625 -13111140 + MLT1A2 LTR MaLR 1 374 0 271 342 123 0 chr10 127207094 127207249 -13109516 - L2 LINE L2 -219 3053 2880 268 253 53 63 chr10 127207360 127207455 -13109310 + L2 LINE L2 3179 3272 0 2198 120 7 0 chr10 127207534 127207833 -13108932 + AluSx SINE Alu 1 301 -11 507 275 101 0 chr10 127208112 127208250 -13108515 - MIR3 SINE MIR -41 167 16 305 309 188 19 chr10 127208321 127208528 -13108237 + MIR SINE MIR 21 262 0 216 0 0 0 chr10 127208612 127208636 -13108129 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 369 370 12 0 chr10 127209064 127209237 -13107528 + (TGGA)n Simple_repeat Simple_repeat 2 176 0 2748 134 117 15 chr10 127209305 127209766 -13106999 + MLT2B2 LTR ERVL 1 508 -7 486 334 85 38 chr10 127209970 127210395 -13106370 + L2 LINE L2 218 662 -2652 * 825 265 23 14 chr10 127210384 127210603 -13106162 - MIR SINE MIR -5 257 37 471 203 17 43 chr10 127210667 127210818 -13105947 + MER3 DNA MER1_type 1 207 -2 271 345 42 42 chr10 127210838 127211096 -13105669 + L2 LINE L2 723 983 -2331 2700 183 19 25 chr10 127211096 127211141 -13105624 - MLT2B2 LTR ERVL 0 515 471 411 68 0 0 chr10 127211141 127211200 -13105565 + (TG)n Simple_repeat Simple_repeat 2 60 0 2700 183 19 25 chr10 127211200 127211672 -13105093 - MLT2B2 LTR ERVL -44 471 1 271 345 42 42 chr10 127211672 127211749 -13105016 + L2 LINE L2 982 1058 -2256 2052 230 76 16 chr10 127211763 127212844 -13103921 + MER69 DNA AcHobo 17 2526 0 473 316 136 9 chr10 127212860 127213315 -13103450 + L2 LINE L2 1064 1576 -1738 548 291 132 56 chr10 127213401 127213758 -13103007 + LTR16C LTR ERVL 81 464 -27 552 316 111 22 chr10 127213765 127214126 -13102639 + L2 LINE L2 2526 2918 -396 381 194 43 43 chr10 127214135 127214228 -13102537 + L2 LINE L2 3161 3253 -60 389 269 55 28 chr10 127215683 127215828 -13100937 - L2 LINE L2 0 3313 3165 279 298 58 81 chr10 127215939 127216063 -13100702 - L2 LINE L2 -344 2970 2845 2371 97 3 0 chr10 127216063 127216372 -13100393 + AluSq SINE Alu 2 311 -2 971 255 62 52 chr10 127216376 127216913 -13099852 - MER34 LTR ERV1 0 542 1 279 298 58 81 chr10 127216913 127217092 -13099673 - L2 LINE L2 -472 2842 2669 2152 128 0 16 chr10 127217798 127218111 -13098654 + AluSc SINE Alu 1 308 -1 417 171 0 72 chr10 127218563 127218674 -13098091 + L1PA7 LINE L1 6052 6154 0 1213 22 0 0 chr10 127219259 127219398 -13097367 - L1PA3 LINE L1 -261 5894 5756 2376 15 0 0 chr10 127219398 127219659 -13097106 + L1PA3 LINE L1 5891 6155 0 46 19 0 0 chr10 127219659 127219712 -13097053 + AT_rich Low_complexity Low_complexity 1 53 0 2264 102 7 0 chr10 127220076 127220369 -13096396 - AluSg SINE Alu -15 295 1 1297 151 19 12 chr10 127221360 127221618 -13095147 - L1MA7 LINE L1 0 6291 6032 3252 193 24 0 chr10 127221618 127222251 -13094514 + L1 LINE L1 4667 5314 -832 221 0 35 0 chr10 127222503 127222532 -13094233 + (TG)n Simple_repeat Simple_repeat 1 30 0 217 0 0 57 chr10 127222917 127222952 -13093813 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1802 136 0 21 chr10 127222957 127223244 -13093521 - AluSx SINE Alu -31 281 1 228 229 0 0 chr10 127223618 127223666 -13093099 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 274 299 216 15 chr10 127223694 127223898 -13092867 + MIR SINE MIR 5 249 -13 379 327 24 19 chr10 127223980 127224000 -13092765 - L2 LINE L2 -183 3130 3112 2536 73 3 6 chr10 127224000 127224314 -13092451 + AluSp SINE Alu 1 313 0 379 327 24 19 chr10 127224314 127224504 -13092261 - L2 LINE L2 -201 3112 2919 297 270 40 20 chr10 127224534 127224634 -13092131 + L2 LINE L2 3169 3270 -2 1046 122 0 0 chr10 127224840 127224979 -13091786 - AluSq/x SINE Alu -174 139 1 24 0 0 0 chr10 127225850 127225874 -13090891 + AT_rich Low_complexity Low_complexity 1 24 0 224 246 77 0 chr10 127226712 127226777 -13089988 - L2 LINE L2 -2 3311 3242 307 260 65 24 chr10 127227018 127227141 -13089624 + MIR SINE MIR 87 214 -48 282 293 100 77 chr10 127227129 127227700 -13089065 - L2 LINE L2 -439 2875 2292 * 275 276 8 65 chr10 127227864 127227987 -13088778 - L2 LINE L2 -225 3088 2973 253 162 42 16 chr10 127227956 127228035 -13088730 + MIR SINE MIR 87 146 -62 * 245 288 0 0 chr10 127229773 127229839 -13086926 + LTR67 LTR ERVL 484 549 -8 858 301 4 0 chr10 127230103 127230342 -13086423 + MIR SINE MIR 8 247 -15 202 303 0 0 chr10 127230768 127230834 -13085931 + T-rich Low_complexity Low_complexity 1 66 0 2113 133 3 10 chr10 127231329 127231637 -13085128 - AluSx SINE Alu -6 306 1 631 284 50 0 chr10 127231707 127231908 -13084857 - MIR SINE MIR -3 259 49 683 211 20 13 chr10 127232010 127232162 -13084603 - MER5A DNA MER1_type -34 155 3 816 189 110 22 chr10 127232451 127232678 -13084087 - MER113 DNA MER1_type? -69 452 206 747 276 69 5 chr10 127232715 127232932 -13083833 + MIR SINE MIR 25 255 -7 314 257 140 44 chr10 127233662 127233798 -13082967 - MER5A DNA MER1_type -36 153 5 1874 178 69 5 chr10 127234469 127234846 -13081919 - L1MB3 LINE L1 0 6183 5783 195 42 0 0 chr10 127234846 127234870 -13081895 + (TG)n Simple_repeat Simple_repeat 2 25 0 232 163 0 0 chr10 127234870 127234919 -13081846 + L1MC4 LINE L1 6652 6700 -1342 655 284 20 10 chr10 127236501 127236705 -13080060 + MIR SINE MIR 13 218 -44 967 290 63 37 chr10 127236789 127237247 -13079518 + LTR16C LTR ERVL 22 491 0 622 287 43 0 chr10 127238242 127238451 -13078314 - MIR SINE MIR -14 248 31 2277 112 3 0 chr10 127238813 127239116 -13077649 + AluSx SINE Alu 1 304 -8 231 153 129 35 chr10 127239340 127239425 -13077340 - MIR SINE MIR -135 127 35 672 257 129 51 chr10 127239586 127240068 -13076697 + L1MC4 LINE L1 7311 7920 -122 180 0 0 0 chr10 127240088 127240108 -13076657 + (TG)n Simple_repeat Simple_repeat 2 21 0 1072 297 79 22 chr10 127241299 127241745 -13075020 - MLT1K LTR MaLR -37 551 80 2399 196 83 2 chr10 127241745 127242225 -13074540 - LTR53 LTR ERVL 0 519 1 383 195 89 49 chr10 127243594 127243717 -13073048 - L2 LINE L2 0 3313 3186 238 303 82 41 chr10 127243726 127243848 -13072917 + MLT1K LTR MaLR 2 128 -460 204 231 0 0 chr10 127243966 127244005 -13072760 + (TATG)n Simple_repeat Simple_repeat 2 40 0 231 114 0 0 chr10 127244654 127244689 -13072076 + (TAA)n Simple_repeat Simple_repeat 1 35 0 4397 21 0 0 chr10 127245245 127245811 -13070954 - L1PA3 LINE L1 -703 5452 4887 6343 17 0 0 chr10 127245811 127246515 -13070250 + L1PA3 LINE L1 5448 6155 0 234 303 109 23 chr10 127246544 127246719 -13070046 + L3 LINE CR1 1374 1563 -14 1837 213 60 17 chr10 127247143 127247613 -13069152 - L1ME2 LINE L1 -1 6163 5674 1591 257 51 40 chr10 127247641 127248215 -13068550 + L1ME LINE L1 4797 5380 -784 1604 80 13 9 chr10 127248215 127248441 -13068324 + L1PA8 LINE L1 5944 6170 -2 1591 257 51 40 chr10 127248441 127248502 -13068263 + L1ME LINE L1 5380 5439 -725 3490 108 34 36 chr10 127248760 127249287 -13067478 + MER1A DNA MER1_type 2 527 0 2400 91 10 0 chr10 127249434 127249742 -13067023 + AluY SINE Alu 1 311 0 43251 51 10 4 chr10 127249844 127255964 -13060801 + L1PA5 LINE L1 1 6154 0 2056 146 7 0 chr10 127256221 127256529 -13060236 - AluSx SINE Alu -2 310 1 244 284 59 39 chr10 127256728 127256830 -13059935 + L3 LINE CR1 1256 1359 -218 254 225 118 112 chr10 127257199 127257377 -13059388 - MARNA DNA Mariner -217 369 191 207 175 53 0 chr10 127257905 127257962 -13058803 + (TGGG)n Simple_repeat Simple_repeat 3 62 0 819 234 114 36 chr10 127258550 127258884 -13057881 + MLT1K LTR MaLR 142 501 -87 260 350 70 10 chr10 127258969 127259169 -13057596 + L3 LINE CR1 1313 1524 -53 2210 116 0 6 chr10 127259523 127259834 -13056931 - AluSc SINE Alu 0 309 1 375 162 9 18 chr10 127260346 127260457 -13056308 + (TA)n Simple_repeat Simple_repeat 2 111 0 290 265 24 12 chr10 127260458 127260541 -13056224 - L2 LINE L2 -18 3254 3171 23 33 0 0 chr10 127261721 127261751 -13055014 + GC_rich Low_complexity Low_complexity 1 30 0 185 146 21 0 chr10 127261899 127261947 -13054818 + C-rich Low_complexity Low_complexity 4 52 0 539 306 95 0 chr10 127265247 127265479 -13051286 - MIR SINE MIR -1 261 8 477 259 26 0 chr10 127265580 127265696 -13051069 - MIR SINE MIR -110 152 34 2551 58 3 13 chr10 127267767 127268078 -13048687 - AluY SINE Alu -3 308 1 415 230 145 31 chr10 127268108 127268283 -13048482 + MIR SINE MIR 4 195 -62 212 333 0 0 chr10 127268374 127268434 -13048331 + MIR SINE MIR 2 61 -201 463 165 117 10 chr10 127268436 127268539 -13048226 - FRAM SINE Alu -11 165 52 1651 172 34 24 chr10 127268566 127268857 -13047908 - AluJb SINE Alu -18 294 1 181 283 22 33 chr10 127268858 127268950 -13047815 + MIR SINE MIR 57 147 -115 190 245 0 38 chr10 127269055 127269108 -13047657 + MIR SINE MIR 212 262 0 254 300 80 59 chr10 127270074 127270311 -13046454 + L3b LINE CR1 1156 1397 -186 272 136 0 51 chr10 127270353 127270366 -13046399 - L1ME3A LINE L1 -9 6161 6149 443 152 13 0 chr10 127270366 127270445 -13046320 + MER116 DNA Mariner 1 80 0 272 136 0 51 chr10 127270445 127270490 -13046275 - L1ME3A LINE L1 -21 6149 6106 486 246 208 4 chr10 127270551 127270811 -13045954 - L1ME3A LINE L1 -231 5933 5621 703 229 257 10 chr10 127271019 127271307 -13045458 + L1ME3A LINE L1 5621 5979 -191 240 167 0 0 chr10 127271387 127271429 -13045336 - MER116 DNA Mariner 0 80 39 2326 62 0 39 chr10 127271835 127272142 -13044623 - AluY SINE Alu -16 295 1 3411 101 14 8 chr10 127272484 127272978 -13043787 - L1PA13 LINE L1 -1 6162 5666 400 301 119 30 chr10 127273067 127273369 -13043396 + L1ME4a LINE L1 5790 6118 -3 342 279 80 72 chr10 127273593 127273966 -13042799 + L1ME4a LINE L1 5532 5907 -214 2495 74 0 0 chr10 127273980 127274279 -13042486 - AluY SINE Alu -12 299 1 672 301 117 14 chr10 127274518 127275317 -13041448 - L1MC4a LINE L1 -746 5334 4944 429 306 83 0 chr10 127275558 127275702 -13041063 + MIR SINE MIR 3 158 -104 3615 265 60 35 chr10 127276223 127277998 -13038767 - L1MC4a LINE L1 -3873 2388 571 266 302 31 21 chr10 127278242 127278338 -13038427 - L1MC4a LINE L1 -5617 453 357 1957 144 152 13 chr10 127278342 127278718 -13038047 + MSTA LTR MaLR 1 428 0 261 274 106 35 chr10 127278844 127278957 -13037808 - HAL1 LINE L1 -2386 121 1 25 0 0 0 chr10 127279012 127279037 -13037728 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 127279236 127279257 -13037508 + AT_rich Low_complexity Low_complexity 1 21 0 425 289 43 21 chr10 127279516 127279703 -13037062 - MIR SINE MIR 0 262 72 224 269 45 0 chr10 127280733 127280800 -13035965 - L2 LINE L2 -13 3259 3190 668 287 20 7 chr10 127281068 127281305 -13035460 - MIR SINE MIR -15 247 8 280 235 157 33 chr10 127281390 127281543 -13035222 + MIR SINE MIR 2 173 -89 346 333 16 0 chr10 127282429 127282555 -13034210 + L2 LINE L2 3141 3268 -4 795 311 79 34 chr10 127283225 127283697 -13033068 - L1ME4a LINE L1 -11 6110 5607 2390 68 0 0 chr10 127283697 127284014 -13032751 + AluY SINE Alu 1 317 0 795 311 79 34 chr10 127284014 127284096 -13032669 - L1ME4a LINE L1 -514 5607 5530 478 293 33 65 chr10 127284125 127284432 -13032333 + L2 LINE L2 3017 3313 0 745 295 38 40 chr10 127285036 127285406 -13031359 + L3 LINE CR1 535 903 -674 252 338 47 81 chr10 127285567 127285863 -13030902 + L2 LINE L2 2964 3249 -23 2151 126 63 20 chr10 127286526 127286875 -13029890 + THE1B LTR MaLR 1 364 0 3868 71 0 2 chr10 127286875 127287369 -13029396 + THE1B-int LTR MaLR 1 493 -1087 2206 81 0 28 chr10 127287377 127287662 -13029103 + AluY SINE Alu 2 278 -33 1774 170 23 42 chr10 127287662 127288171 -13028594 + MLT2A2 LTR ERVL 52 554 0 229 205 12 108 chr10 127288173 127288256 -13028509 + MIR SINE MIR 163 237 -25 2278 166 38 7 chr10 127288331 127288748 -13028017 + MSTB1 LTR MaLR 3 432 0 182 287 28 56 chr10 127288759 127288867 -13027898 - L2 LINE L2 -82 3231 3127 281 267 67 33 chr10 127288876 127289026 -13027739 - L1ME4a LINE L1 -106 6015 5861 1785 129 80 124 chr10 127289064 127289475 -13027290 - MSTD LTR MaLR 0 396 4 2111 190 68 43 chr10 127289480 127289965 -13026800 + MLT1D LTR MaLR 8 504 -1 275 233 216 17 chr10 127289967 127290083 -13026682 + L2 LINE L2 3125 3263 -9 228 183 0 33 chr10 127290450 127290510 -13026255 + A-rich Low_complexity Low_complexity 3 60 0 250 276 31 10 chr10 127290602 127290700 -13026065 - MER5B DNA MER1_type -75 103 4 206 311 14 54 chr10 127290763 127290837 -13025928 - MIR3 SINE MIR -27 181 111 403 216 17 17 chr10 127291214 127291330 -13025435 + MIR SINE MIR 117 232 -30 241 356 69 12 chr10 127292465 127292625 -13024140 - MIR3 SINE MIR -7 201 33 237 65 0 0 chr10 127293055 127293086 -13023679 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 314 141 12 24 chr10 127293094 127293217 -13023548 - MIR SINE MIR -6 256 73 453 308 76 5 chr10 127293591 127293776 -13022989 + MIR SINE MIR 52 249 -13 618 285 41 68 chr10 127294287 127294582 -13022183 - MER102b DNA MER1_type -48 293 7 576 169 0 40 chr10 127294649 127294773 -13021992 - L2 LINE L2 -2 3311 3193 325 291 118 39 chr10 127296438 127296768 -13019997 - L1MC5 LINE L1 -114 7847 7492 270 258 106 23 chr10 127297289 127297421 -13019344 - MIR SINE MIR -62 200 58 584 285 45 60 chr10 127297538 127298005 -13018760 - L1MC4 LINE L1 -1 8041 7582 2652 188 47 4 chr10 127298460 127298954 -13017811 - LTR53 LTR ERVL 0 519 5 795 275 18 0 chr10 127298972 127299194 -13017571 - MIR SINE MIR -15 247 22 375 282 9 9 chr10 127299839 127299949 -13016816 + MIR SINE MIR 80 189 -73 211 357 3 0 chr10 127300708 127300797 -13015968 - MIR SINE MIR -74 134 45 393 260 125 0 chr10 127301381 127301485 -13015280 + L2 LINE L2 3155 3271 -1 282 125 0 0 chr10 127301611 127301659 -13015106 + (GA)n Simple_repeat Simple_repeat 1 48 0 288 53 0 0 chr10 127301660 127301698 -13015067 + (TG)n Simple_repeat Simple_repeat 1 38 0 298 256 26 0 chr10 127302169 127302247 -13014518 + (TG)n Simple_repeat Simple_repeat 2 81 0 2499 67 0 0 chr10 127302513 127302811 -13013954 + AluY SINE Alu 1 298 -13 1980 124 4 0 chr10 127303406 127303679 -13013086 - AluSx SINE Alu -3 309 36 444 111 0 111 chr10 127304125 127304215 -13012550 + MADE1 DNA Mariner 1 80 0 395 165 13 0 chr10 127304285 127304364 -13012401 - MER5A DNA MER1_type -84 105 26 214 364 175 0 chr10 127304371 127304525 -13012240 + MER5A DNA MER1_type 9 189 0 525 227 101 35 chr10 127305134 127305422 -13011343 + MLT1G LTR MaLR 2 267 -323 445 228 144 50 chr10 127305802 127305982 -13010783 + MLT1G LTR MaLR 340 536 -6 249 33 0 0 chr10 127306049 127306079 -13010686 + (CATTT)n Simple_repeat Simple_repeat 4 33 0 360 269 162 48 chr10 127306222 127306389 -13010376 - MIR SINE MIR -54 208 23 217 299 81 0 chr10 127306944 127307031 -13009734 - L2 LINE L2 0 3272 3179 221 164 0 36 chr10 127307095 127307150 -13009615 + GA-rich Low_complexity Low_complexity 1 53 0 681 204 9 0 chr10 127307497 127307610 -13009155 + MER81 DNA DNA 1 114 0 2654 139 41 15 chr10 127308865 127309425 -13007340 - LTR10E LTR ERV1 0 591 1 466 267 16 18 chr10 127309806 127309998 -13006767 - MIR SINE MIR -29 233 45 498 33 0 0 chr10 127312110 127312170 -13004595 + (CAT)n Simple_repeat Simple_repeat 3 62 0 395 326 46 0 chr10 127312194 127312369 -13004396 - MIR SINE MIR -37 225 43 365 370 20 5 chr10 127313764 127313967 -13002798 + MIR SINE MIR 50 255 -7 * 404 267 53 39 chr10 127313924 127314134 -13002631 - MIR SINE MIR -23 239 28 208 184 0 41 chr10 127314295 127314344 -13002421 + MIR3 SINE MIR 111 157 -51 243 234 39 13 chr10 127314408 127314485 -13002280 + MIR SINE MIR 73 151 -111 617 336 40 16 chr10 127314693 127314943 -13001822 + MIR SINE MIR 7 262 0 249 344 96 8 chr10 127316512 127316577 -13000188 + MER5A DNA MER1_type 12 70 -119 2499 54 3 7 chr10 127316577 127316874 -12999891 + AluY SINE Alu 1 296 -15 249 344 96 8 chr10 127316874 127316933 -12999832 + MER5A DNA MER1_type 70 147 -42 671 240 136 16 chr10 127317094 127317336 -12999429 - MARNA DNA Mariner -206 380 110 1656 97 0 0 chr10 127317383 127317590 -12999175 + AluSc SINE Alu 86 292 -17 242 266 123 13 chr10 127323562 127323716 -12993049 + MIR SINE MIR 20 190 -72 454 224 72 8 chr10 127323769 127323894 -12992871 - MER94 DNA DNA 0 134 2 188 237 0 17 chr10 127325004 127325063 -12991702 + CT-rich Low_complexity Low_complexity 1 58 0 249 33 0 0 chr10 127325457 127325487 -12991278 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 963 85 23 0 chr10 127325494 127325623 -12991142 - AluSg/x SINE Alu -31 281 150 492 274 83 2 chr10 127328607 127328817 -12987948 + MIR SINE MIR 30 262 0 231 36 0 0 chr10 127331110 127331138 -12985627 + (ATG)n Simple_repeat Simple_repeat 2 29 0 183 271 62 52 chr10 127331742 127331838 -12984927 + MIR SINE MIR 28 124 -84 388 301 92 35 chr10 127332267 127332496 -12984269 + MIR SINE MIR 2 243 -19 369 288 15 23 chr10 127333037 127333169 -12983596 - MIR SINE MIR -58 150 20 247 175 16 16 chr10 127333832 127333895 -12982870 + (TA)n Simple_repeat Simple_repeat 2 64 0 379 198 157 8 chr10 127334021 127334142 -12982623 + MIR SINE MIR 55 193 -69 301 234 75 0 chr10 127334741 127334835 -12981930 - MIR SINE MIR -83 179 79 272 209 47 35 chr10 127334978 127335064 -12981701 + MLT1D LTR MaLR 6 92 -375 628 226 12 14 chr10 127335065 127335236 -12981529 + L1MA9 LINE L1 6092 6255 -45 369 224 56 19 chr10 127335264 127335371 -12981394 + MLT1D LTR MaLR 79 189 -316 2087 128 0 20 chr10 127335374 127335679 -12981086 + AluSc SINE Alu 1 299 -10 259 219 31 16 chr10 127335983 127336047 -12980718 + CT-rich Low_complexity Low_complexity 4 68 0 922 271 9 0 chr10 127337392 127337610 -12979155 + MER58A DNA MER1_type 1 220 -4 453 242 82 45 chr10 127338202 127338446 -12978319 - HAL1 LINE L1 -947 1560 1308 703 247 39 36 chr10 127338448 127338727 -12978038 - HAL1 LINE L1 -1246 1261 982 1043 277 110 33 chr10 127338784 127339449 -12977316 - HAL1 LINE L1 -1637 870 155 301 167 0 0 chr10 127339500 127339548 -12977217 - MLT2C2 LTR ERVL 0 414 367 247 181 28 0 chr10 127339548 127339620 -12977145 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 2060 148 19 57 chr10 127339640 127340065 -12976700 - MLT2C2 LTR ERVL -55 409 1 2607 43 0 0 chr10 127340538 127340842 -12975923 - AluY SINE Alu -7 304 1 371 214 58 0 chr10 127341269 127341372 -12975393 - MER106A DNA MER1_type -15 221 113 231 176 110 88 chr10 127341471 127341562 -12975203 - MER106A DNA MER1_type -143 93 1 1111 154 47 23 chr10 127341570 127341648 -12975117 + MER20 DNA MER1_type 1 76 -143 222 118 0 0 chr10 127341648 127341682 -12975083 + (TG)n Simple_repeat Simple_repeat 2 35 0 1111 154 47 23 chr10 127341682 127341817 -12974948 + MER20 DNA MER1_type 76 219 0 681 221 0 0 chr10 127342034 127342156 -12974609 + AluJo SINE Alu 2 123 -179 694 225 45 22 chr10 127342258 127342436 -12974329 + AluJo SINE Alu 118 299 -13 2422 232 39 44 chr10 127342617 127343419 -12973346 - L1ME2 LINE L1 -10 6965 6168 2335 81 0 53 chr10 127343551 127343871 -12972894 - AluSc SINE Alu -5 304 2 1124 231 76 10 chr10 127343873 127344279 -12972486 - L1ME2 LINE L1 -945 6012 5580 319 123 0 31 chr10 127344324 127344389 -12972376 + (CA)n Simple_repeat Simple_repeat 2 64 0 3698 40 4 4 chr10 127344389 127344843 -12971922 - L1PA7 LINE L1 -9 6145 5692 3152 176 28 75 chr10 127344905 127345456 -12971309 - L1MB8 LINE L1 -2 6176 5654 293 157 0 0 chr10 127345456 127345507 -12971258 - MADE1 DNA Mariner 0 80 30 3152 176 28 75 chr10 127345507 127346087 -12970678 - L1MB8 LINE L1 -524 5654 5048 292 251 61 100 chr10 127346098 127346329 -12970436 - L1ME2 LINE L1 -4441 2697 2476 2071 237 56 21 chr10 127346487 127347645 -12969120 - L1ME2 LINE L1 -4543 2416 1217 1303 229 73 20 chr10 127347650 127348187 -12968578 - L1MB8 LINE L1 -3200 2946 2382 3554 185 27 29 chr10 127348486 127349349 -12967416 + L1 LINE L1 4461 5321 -825 531 0 0 0 chr10 127349451 127349510 -12967255 + (TC)n Simple_repeat Simple_repeat 2 60 0 297 0 0 0 chr10 127349509 127349542 -12967223 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 517 306 40 5 chr10 127349973 127350172 -12966593 + L2 LINE L2 2688 2893 -421 688 281 62 33 chr10 127350184 127350438 -12966327 - MIR SINE MIR -3 259 1 356 313 15 15 chr10 127350540 127350674 -12966091 + LTR16C LTR ERVL 36 169 -322 217 373 38 0 chr10 127350759 127350917 -12965848 + MIR SINE MIR 91 254 -8 22 0 0 0 chr10 127351090 127351112 -12965653 + AT_rich Low_complexity Low_complexity 1 22 0 335 277 178 0 chr10 127351860 127351958 -12964807 - L2 LINE L2 -4 3268 3153 528 285 139 0 chr10 127351958 127352130 -12964635 - MER91A DNA MER1_type 0 196 1 443 286 58 13 chr10 127352643 127352797 -12963968 + MIR SINE MIR 40 200 -62 1720 120 0 12 chr10 127353234 127353475 -12963290 - AluSg SINE Alu -15 295 58 3686 164 32 4 chr10 127355051 127355736 -12961029 - L1MB3 LINE L1 -1 6182 5479 2076 154 40 35 chr10 127357187 127357734 -12959031 + MLT2A2 LTR ERVL 1 554 0 270 262 97 10 chr10 127359290 127359393 -12957372 + MIR SINE MIR 78 189 -73 5976 120 0 0 chr10 127359534 127360469 -12956296 - L1PA15 LINE L1 -4 6161 5218 222 37 0 0 chr10 127360540 127360567 -12956198 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4725 240 94 26 chr10 127360568 127363256 -12953509 + L1ME2 LINE L1 3214 6089 -75 347 287 65 46 chr10 127363436 127363544 -12953221 + L2 LINE L2 3155 3264 -8 210 219 0 0 chr10 127363583 127363624 -12953141 + (TGG)n Simple_repeat Simple_repeat 2 42 0 387 0 0 0 chr10 127363625 127363668 -12953097 + (TG)n Simple_repeat Simple_repeat 1 43 0 1862 147 37 62 chr10 127364665 127365039 -12951726 + MLT1A1 LTR MaLR 1 365 0 4517 184 34 10 chr10 127365102 127366017 -12950748 - MSTA-int LTR MaLR -714 937 1 2198 129 135 5 chr10 127366017 127366396 -12950369 - MSTA LTR MaLR 0 428 1 201 39 0 0 chr10 127367135 127367161 -12949604 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 415 298 65 8 chr10 127367224 127367348 -12949417 - L2 LINE L2 0 3272 3142 691 298 81 0 chr10 127368069 127368267 -12948498 - MIR SINE MIR -4 258 45 526 66 53 0 chr10 127368306 127368382 -12948383 + MADE1 DNA Mariner 1 80 0 47 33 0 0 chr10 127369457 127369518 -12947247 + AT_rich Low_complexity Low_complexity 1 61 0 956 257 89 45 chr10 127369722 127369858 -12946907 - L1ME3A LINE L1 -219 5951 5822 2115 124 3 25 chr10 127369858 127370173 -12946592 - AluSx SINE Alu -2 310 3 956 257 89 45 chr10 127370173 127370764 -12946001 - L1ME3A LINE L1 -348 5822 5190 4292 164 27 30 chr10 127371023 127371881 -12944884 + Tigger2 DNA MER2_type 1 855 -1863 307 98 0 235 chr10 127371881 127371931 -12944834 - MADE1 DNA Mariner 0 80 64 2237 129 0 0 chr10 127371931 127372234 -12944531 + AluSx SINE Alu 1 303 -9 307 98 0 235 chr10 127372234 127372285 -12944480 - MADE1 DNA Mariner -16 64 3 887 161 19 12 chr10 127372286 127372447 -12944318 + Tigger2 DNA MER2_type 2557 2718 0 421 290 124 7 chr10 127372713 127373003 -12943762 - L1ME3A LINE L1 -1093 5053 4730 602 251 32 13 chr10 127373079 127373345 -12943420 - MLT1I LTR MaLR -48 361 63 1114 306 83 9 chr10 127373422 127374327 -12942438 - L1ME3A LINE L1 -1500 4646 3656 2057 125 3 0 chr10 127374416 127374703 -12942062 + AluSq SINE Alu 1 288 -25 180 0 0 0 chr10 127374709 127374729 -12942036 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2760 6 13 0 chr10 127374976 127375290 -12941475 + AluYb8 SINE Alu 1 318 0 433 271 81 49 chr10 127375369 127376102 -12940663 - L1ME3A LINE L1 -2919 3227 2472 22 56 0 0 chr10 127376283 127376319 -12940446 + AT_rich Low_complexity Low_complexity 1 36 0 440 18 18 0 chr10 127376759 127376816 -12939949 + (TG)n Simple_repeat Simple_repeat 1 58 0 951 292 66 68 chr10 127376886 127377994 -12938771 - L1MEd LINE L1 -914 1576 375 2172 112 0 38 chr10 127377994 127378308 -12938457 - AluSx SINE Alu -10 302 1 951 292 66 68 chr10 127378308 127378410 -12938355 - L1MEd LINE L1 -2115 375 274 2175 115 0 3 chr10 127380412 127380708 -12936057 + AluSx SINE Alu 3 297 -15 206 286 18 0 chr10 127381257 127381313 -12935452 - L2 LINE L2 -22 3291 3235 431 281 56 19 chr10 127381440 127381600 -12935165 + MIR SINE MIR 79 244 -18 368 20 20 0 chr10 127382548 127382597 -12934168 + (TG)n Simple_repeat Simple_repeat 2 51 0 24 0 0 0 chr10 127385268 127385292 -12931473 + AT_rich Low_complexity Low_complexity 1 24 0 381 212 0 0 chr10 127385359 127385423 -12931342 - Tigger2 DNA MER2_type -10 2708 2645 1730 140 29 8 chr10 127385423 127385743 -12931022 + THE1A LTR MaLR 4 355 0 570 172 0 0 chr10 127385743 127385841 -12930924 - Tigger2 DNA MER2_type -67 2651 2554 872 176 39 10 chr10 127385840 127386044 -12930721 - Tigger2 DNA MER2_type -2508 210 1 1871 82 8 0 chr10 127386275 127386531 -12930234 + L1PA5 LINE L1 5897 6154 0 207 306 139 9 chr10 127386811 127386919 -12929846 - MIR SINE MIR -69 139 18 25 31 0 0 chr10 127387545 127387577 -12929188 + AT_rich Low_complexity Low_complexity 1 32 0 1976 123 0 4 chr10 127387620 127387933 -12928832 - AluSx SINE Alu 0 321 10 584 269 7 0 chr10 127387950 127388091 -12928674 - FRAM SINE Alu -26 150 9 1779 148 159 8 chr10 127388940 127389312 -12927453 + MSTA LTR MaLR 1 428 0 4023 71 5 11 chr10 127389834 127390399 -12926366 + L1P LINE L1 3141 3702 -2444 261 313 40 34 chr10 127390490 127390666 -12926099 - L2 LINE L2 -1747 1567 1391 189 191 24 0 chr10 127390682 127390724 -12926041 - L2 LINE L2 -2084 1230 1188 1359 196 45 14 chr10 127391427 127391713 -12925052 + AluJo SINE Alu 6 300 -12 1830 158 27 38 chr10 127391715 127392082 -12924683 + L1MB8 LINE L1 5816 6178 0 683 274 61 69 chr10 127392129 127392490 -12924275 + HAL1 LINE L1 23 380 -2127 193 29 59 0 chr10 127392557 127392591 -12924174 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr10 127392840 127392864 -12923901 + GC_rich Low_complexity Low_complexity 1 24 0 210 206 0 79 chr10 127395554 127395617 -12921148 + CT-rich Low_complexity Low_complexity 5 62 0 4325 198 22 5 chr10 127395796 127397023 -12919742 - L1M4 LINE L1 -2074 4072 2781 22 0 0 0 chr10 127397714 127397736 -12919029 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 127397806 127397828 -12918937 + AT_rich Low_complexity Low_complexity 1 22 0 949 114 0 36 chr10 127398879 127399019 -12917746 - FLAM_C SINE Alu -8 135 1 339 339 26 0 chr10 127399052 127399167 -12917598 + L2 LINE L2 3138 3255 -17 787 245 27 0 chr10 127400953 127401137 -12915628 - MER5A DNA MER1_type 0 189 1 183 267 100 0 chr10 127401321 127401381 -12915384 - MIR SINE MIR -194 68 3 342 118 20 0 chr10 127401782 127401833 -12914932 - MER4A LTR ERV1 -350 314 263 * 473 135 73 21 chr10 127401832 127401928 -12914837 - MER4A LTR ERV1 -563 101 1 24 53 0 0 chr10 127402202 127402240 -12914525 + AT_rich Low_complexity Low_complexity 1 38 0 1398 169 4 30 chr10 127403367 127403634 -12913131 + MER4A LTR ERV1 405 664 0 2208 119 20 0 chr10 127403825 127404128 -12912637 + AluSq SINE Alu 1 309 -4 267 279 46 82 chr10 127405004 127405223 -12911542 - L2 LINE L2 -2 3311 3101 2087 140 3 3 chr10 127405274 127405582 -12911183 - AluSx SINE Alu -4 308 1 2138 124 0 0 chr10 127406653 127406943 -12909822 - AluSx SINE Alu -1 311 22 613 121 0 0 chr10 127406943 127407026 -12909739 - AluS SINE Alu -228 84 2 405 0 0 0 chr10 127408197 127408242 -12908523 + (CA)n Simple_repeat Simple_repeat 1 45 0 973 188 117 78 chr10 127408456 127408765 -12908000 - MLT1A1 LTR MaLR -32 333 13 9525 60 2 1 chr10 127408976 127410196 -12906569 - L1P LINE L1 -3545 2601 1380 200 150 0 50 chr10 127410936 127410976 -12905789 - L2 LINE L2 -12 3260 3223 311 277 21 7 chr10 127413007 127413128 -12903637 + MIR SINE MIR 15 134 -74 215 229 21 0 chr10 127413261 127413309 -12903456 + GA-rich Low_complexity Low_complexity 4 52 0 234 351 21 0 chr10 127413413 127413507 -12903258 + MER5A DNA MER1_type 94 189 0 7593 110 12 0 chr10 127414512 127415618 -12901147 - L1P LINE L1 -3702 2444 1326 195 42 0 0 chr10 127417202 127417226 -12899539 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 212 317 46 63 chr10 127417226 127417510 -12899255 - L2 LINE L2 -824 2490 2212 202 295 13 13 chr10 127417610 127417688 -12899077 + MIR SINE MIR 168 245 -17 1765 126 4 0 chr10 127418163 127418402 -12898363 - AluSg SINE Alu -70 240 1 272 286 160 0 chr10 127418519 127418638 -12898127 - MIR SINE MIR -120 142 5 180 210 16 48 chr10 127418740 127418802 -12897963 - L2 LINE L2 -3 3269 3210 282 221 0 15 chr10 127419240 127419308 -12897457 - L1ME4a LINE L1 0 6121 6055 1851 171 60 73 chr10 127420007 127420296 -12896469 - L1MA8 LINE L1 -458 5833 5552 2392 57 0 0 chr10 127420296 127420602 -12896163 - AluY SINE Alu 0 306 1 1851 171 60 73 chr10 127420602 127420831 -12895934 - L1MA8 LINE L1 -739 5552 5321 653 178 0 0 chr10 127422416 127422517 -12894248 - AluJ/FLAM SINE Alu -210 102 2 333 307 192 2 chr10 127423021 127423172 -12893593 + MIR SINE MIR 20 197 -65 1574 146 38 13 chr10 127423202 127423517 -12893248 - MER33 DNA MER1_type -1 323 1 331 339 75 11 chr10 127423846 127424032 -12892733 - L3 LINE CR1 -14 1563 1366 438 285 7 7 chr10 127424713 127424857 -12891908 - MIR SINE MIR -2 260 117 2417 73 0 13 chr10 127425038 127425341 -12891424 + AluY SINE Alu 1 299 -12 477 221 9 18 chr10 127426115 127426228 -12890537 - L1MB3 LINE L1 -227 5956 5845 239 310 62 8 chr10 127426287 127426416 -12890349 + L2 LINE L2 2560 2695 -619 262 154 0 0 chr10 127426505 127426544 -12890221 + AluJo/FLAM SINE Alu 84 122 -180 1807 126 77 25 chr10 127426544 127426830 -12889935 - AluSx SINE Alu -11 301 1 216 0 0 0 chr10 127426838 127426862 -12889903 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3204 102 37 66 chr10 127426862 127427404 -12889361 - LTR9B LTR ERV1 -91 553 28 470 182 13 0 chr10 127427603 127427680 -12889085 - MER30 DNA MER1_type 0 230 153 1926 88 23 4 chr10 127427697 127427960 -12888805 - L1PA6 LINE L1 -5 6149 5882 1761 144 34 34 chr10 127428285 127428577 -12888188 + AluJb SINE Alu 4 295 -17 2980 234 38 7 chr10 127429311 127430148 -12886617 - L1 LINE L1 -2490 3656 2794 270 0 0 0 chr10 127430661 127430691 -12886074 + (TG)n Simple_repeat Simple_repeat 1 30 0 512 308 89 41 chr10 127431195 127431487 -12885278 + MLT1K LTR MaLR 14 319 -269 223 329 12 75 chr10 127431934 127432095 -12884670 - L2 LINE L2 -888 2426 2276 959 176 0 6 chr10 127432205 127432364 -12884401 + AluSc SINE Alu 135 292 -17 572 324 14 5 chr10 127432426 127432636 -12884129 - L2 LINE L2 -1259 2055 1844 2029 127 23 10 chr10 127433779 127434086 -12882679 + AluSx SINE Alu 2 312 0 22 70 0 0 chr10 127434408 127434451 -12882314 + AT_rich Low_complexity Low_complexity 1 43 0 1600 202 24 48 chr10 127435034 127435411 -12881354 - MLT1A2 LTR MaLR -4 370 3 1058 76 48 0 chr10 127435636 127435808 -12880957 + HUERS-P3b LTR ERV1 3442 6314 -1104 430 262 168 0 chr10 127436782 127436931 -12879834 + MER5A DNA MER1_type 16 189 0 826 73 0 0 chr10 127438508 127438617 -12878148 - L1P LINE L1 -5129 1017 909 3200 61 13 30 chr10 127438617 127439114 -12877651 + L1PA4 LINE L1 5686 6174 0 1083 235 177 45 chr10 127440582 127440978 -12875787 - Zaphod DNA AcHobo -3512 519 72 421 306 65 18 chr10 127441392 127441562 -12875203 + MIR3 SINE MIR 26 203 -5 314 295 36 45 chr10 127441741 127441853 -12874912 - L2 LINE L2 -4 3268 3158 525 280 104 28 chr10 127442191 127442267 -12874498 - MER91A DNA MER1_type 0 196 127 1704 209 107 74 chr10 127442267 127442770 -12873995 - MLT2B1 LTR ERVL 0 520 1 525 280 104 28 chr10 127442770 127442875 -12873890 - MER91A DNA MER1_type -69 127 1 359 315 87 7 chr10 127444243 127444529 -12872236 + L2 LINE L2 2303 2611 -703 941 273 89 11 chr10 127444742 127445178 -12871587 - L1MEc LINE L1 -3474 3066 2597 1194 276 88 76 chr10 127445219 127446457 -12870308 - L1MEc LINE L1 -4025 2555 1255 2229 115 0 0 chr10 127446457 127446753 -12870012 - AluSx SINE Alu -16 296 1 1194 276 88 76 chr10 127446753 127446990 -12869775 - L1MEc LINE L1 -5325 1255 1022 15324 45 2 4 chr10 127447177 127449740 -12867025 - L1PA7 LINE L1 -2 6152 3593 47 33 0 0 chr10 127451510 127451571 -12865194 + AT_rich Low_complexity Low_complexity 1 61 0 524 199 29 15 chr10 127451775 127451911 -12864854 - L1ME3A LINE L1 -219 5951 5814 2017 139 3 25 chr10 127451911 127452228 -12864537 - AluSx SINE Alu -2 310 1 233 345 14 42 chr10 127452933 127453075 -12863690 + L2 LINE L2 2361 2498 -816 396 355 30 30 chr10 127453124 127453293 -12863472 + L2 LINE L2 3104 3272 0 275 328 23 0 chr10 127453997 127454125 -12862640 + MARNA DNA Mariner 249 379 -207 285 158 158 26 chr10 127455110 127455186 -12861579 + L3 LINE CR1 583 668 -909 937 152 5 73 chr10 127456317 127456521 -12860244 + MER20 DNA MER1_type 30 219 0 2400 56 12 41 chr10 127458233 127458552 -12858213 + AluY SINE Alu 1 310 -1 429 291 96 14 chr10 127458663 127458883 -12857882 - MER41B LTR ERV1 -210 425 188 231 125 0 0 chr10 127459010 127459050 -12857715 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 342 0 0 0 chr10 127459051 127459089 -12857676 + (CA)n Simple_repeat Simple_repeat 2 39 0 802 292 103 20 chr10 127459683 127460300 -12856465 + L2 LINE L2 2511 3196 -117 607 212 45 8 chr10 127460300 127460432 -12856333 - MER58B DNA MER1_type 0 341 205 304 219 219 55 chr10 127460432 127460527 -12856238 + L2 LINE L2 3165 3288 -25 1980 189 52 71 chr10 127460527 127461003 -12855762 - MLT1C LTR MaLR 0 467 1 304 219 219 55 chr10 127461003 127461035 -12855730 + L2 LINE L2 3288 3313 0 540 186 0 0 chr10 127461162 127461264 -12855501 + CT-rich Low_complexity Low_complexity 1 102 0 13678 223 32 39 chr10 127462030 127463682 -12853083 - L1PA8A LINE L1 -288 6047 4386 1863 214 33 0 chr10 127463682 127464018 -12852747 + MER7A DNA MER2_type 2 346 0 13678 223 32 39 chr10 127464018 127465275 -12851490 - L1PA8A LINE L1 -1949 4386 3123 422 203 0 13 chr10 127465275 127465354 -12851411 + Tigger5 DNA MER2_type 2 79 -2244 13678 223 32 39 chr10 127465354 127465391 -12851374 - L1PA8A LINE L1 -3212 3123 3087 362 247 65 0 chr10 127465391 127465468 -12851297 + Tigger5 DNA MER2_type 2242 2323 0 13678 223 32 39 chr10 127465468 127466634 -12850131 - L1PA8A LINE L1 -3248 3087 1915 1611 161 77 30 chr10 127466634 127466932 -12849833 - AluJb SINE Alu 0 312 1 13678 223 32 39 chr10 127466932 127468168 -12848597 - L1PA8A LINE L1 -4420 1915 632 1992 277 50 24 chr10 127468174 127468791 -12847974 - L1M3b LINE L1 -5537 1500 868 572 214 2 14 chr10 127469009 127469126 -12847639 - L1M3b LINE L1 -6177 860 1 1955 125 3 27 chr10 127469138 127469435 -12847330 - AluSx SINE Alu -17 295 6 415 218 99 111 chr10 127470996 127471306 -12845459 - MLT1J2 LTR MaLR -2 448 100 320 335 40 54 chr10 127471581 127471877 -12844888 + L2 LINE L2 3021 3312 -1 250 233 0 17 chr10 127471892 127471952 -12844813 - MER5A DNA MER1_type -124 65 7 401 348 75 5 chr10 127473051 127473238 -12843527 + MIR SINE MIR 10 209 -53 2184 227 99 32 chr10 127473538 127474202 -12842563 - L1ME2 LINE L1 -1 6958 6250 1496 245 74 94 chr10 127474192 127475060 -12841705 - L1ME2 LINE L1 -4191 2931 1933 * 440 53 0 0 chr10 127475060 127475117 -12841648 - L1PA4 LINE L1 -1 6154 6098 1496 245 74 94 chr10 127475117 127475209 -12841556 - L1ME2 LINE L1 -5189 1933 1841 201 74 0 0 chr10 127475210 127475237 -12841528 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 434 289 47 26 chr10 127475243 127475475 -12841290 - L1ME2 LINE L1 -5109 2013 1777 1947 57 0 0 chr10 127475491 127475721 -12841044 + AluY SINE Alu 77 306 -5 2045 134 0 3 chr10 127475865 127476157 -12840608 - AluSx SINE Alu -21 291 1 801 273 70 25 chr10 127476157 127476463 -12840302 - L1ME2 LINE L1 -4972 1451 1129 486 33 0 0 chr10 127477027 127477087 -12839678 + (TG)n Simple_repeat Simple_repeat 1 60 0 2099 111 0 4 chr10 127477087 127477367 -12839398 - AluSx SINE Alu -33 279 1 839 161 0 56 chr10 127478025 127478168 -12838597 + AluJo SINE Alu 2 136 -176 2098 137 0 22 chr10 127478281 127478596 -12838169 + AluSx SINE Alu 1 308 -4 1795 192 0 7 chr10 127479123 127479430 -12837335 - AluJo SINE Alu -7 305 1 195 239 119 15 chr10 127482603 127482670 -12834095 + MIR SINE MIR 139 212 -50 1121 198 28 0 chr10 127482973 127483185 -12833580 + MER20 DNA MER1_type 1 218 -1 235 237 17 17 chr10 127483874 127483933 -12832832 + MIR3 SINE MIR 105 163 -45 471 73 0 0 chr10 127485388 127485456 -12831309 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 408 88 0 0 chr10 127485714 127485771 -12830994 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 1515 149 64 0 chr10 127486385 127486666 -12830099 - L1MB7 LINE L1 0 6184 5886 483 293 31 118 chr10 127487026 127487449 -12829316 + L2 LINE L2 2884 3269 -3 287 260 87 0 chr10 127488520 127488624 -12828141 - MIR SINE MIR -57 205 93 1725 137 3 44 chr10 127489073 127489366 -12827399 - AluSx SINE Alu -2 310 30 285 293 73 52 chr10 127489960 127490151 -12826614 - L2 LINE L2 -239 3033 2839 2134 117 6 19 chr10 127491715 127492031 -12824734 + AluSx SINE Alu 1 312 0 2181 113 3 7 chr10 127493719 127494020 -12822745 - AluSx SINE Alu -12 300 1 29 0 0 0 chr10 127494693 127494722 -12822043 + AT_rich Low_complexity Low_complexity 1 29 0 2050 78 0 4 chr10 127495310 127495565 -12821200 - AluY SINE Alu -57 254 1 529 267 76 61 chr10 127495761 127496023 -12820742 - MLT1L LTR MaLR -157 458 193 211 102 0 61 chr10 127497271 127497320 -12819445 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 343 176 15 0 chr10 127497817 127497885 -12818880 - MER103 DNA DNA -47 119 51 2354 74 44 3 chr10 127497891 127498188 -12818577 - AluY SINE Alu 0 311 3 289 286 164 7 chr10 127498529 127498669 -12818096 + MIR SINE MIR 34 195 -67 464 139 13 0 chr10 127498676 127498755 -12818010 - MADE1 DNA Mariner 0 80 1 2072 182 3 11 chr10 127498847 127499215 -12817550 - MLT1A1 LTR MaLR 0 365 1 1523 179 48 17 chr10 127500153 127500444 -12816321 + AluJo SINE Alu 3 302 -10 554 203 237 19 chr10 127500563 127500770 -12815995 + MIR SINE MIR 10 261 -1 281 231 51 13 chr10 127501001 127501079 -12815686 - MIR3 SINE MIR -54 154 74 509 316 25 12 chr10 127502338 127502582 -12814183 - MIR SINE MIR -2 260 14 248 232 126 73 chr10 127502728 127502879 -12813886 - HAL1 LINE L1 -2330 177 19 382 220 83 9 chr10 127502947 127503056 -12813709 + L2 LINE L2 3196 3312 -1 2406 156 10 5 chr10 127504187 127504585 -12812180 + MER57A LTR ERV1 1 400 -3 204 288 34 0 chr10 127504756 127504815 -12811950 + MER5A DNA MER1_type 74 134 -55 263 339 52 20 chr10 127505035 127505286 -12811479 + L2 LINE L2 2435 2693 -621 403 296 117 22 chr10 127505302 127505525 -12811240 - L1ME1 LINE L1 -2 6164 5921 2494 76 20 8 chr10 127505525 127505879 -12810886 + MLT2A1 LTR ERVL 1 444 0 571 226 186 5 chr10 127505884 127506083 -12810682 - L1ME1 LINE L1 -88 6078 5844 1679 232 122 37 chr10 127506148 127506691 -12810074 - LTR26 LTR ERV1 -14 589 1 296 289 144 29 chr10 127506719 127506906 -12809859 + L2 LINE L2 2944 3175 -138 1883 163 35 77 chr10 127506906 127507311 -12809454 + MLT1B LTR MaLR 3 390 0 296 289 144 29 chr10 127507311 127507400 -12809365 + L2 LINE L2 3175 3252 -61 387 0 0 0 chr10 127508930 127508973 -12807792 + (CA)n Simple_repeat Simple_repeat 2 44 0 449 281 102 12 chr10 127509104 127509271 -12807494 + MIR SINE MIR 81 262 0 203 224 0 52 chr10 127510080 127510138 -12806627 + MIR SINE MIR 127 181 -81 1265 274 62 40 chr10 127511299 127511751 -12805014 + MLT1K LTR MaLR 64 525 -63 182 180 40 0 chr10 127513106 127513156 -12803609 + GA-rich Low_complexity Low_complexity 1 52 0 322 313 178 13 chr10 127513311 127513541 -12803224 + L3 LINE CR1 1263 1530 -47 1567 307 43 42 chr10 127514907 127515769 -12800996 - L1MEc LINE L1 -5505 891 29 1173 70 6 0 chr10 127516102 127516259 -12800506 - L1PA13 LINE L1 0 6163 6006 417 238 56 14 chr10 127517912 127517929 -12798836 - L1MA10 LINE L1 -1 6333 6317 3117 225 55 24 chr10 127517929 127519081 -12797684 - L1ME2 LINE L1 -9 6155 4975 3526 209 120 12 chr10 127519105 127520330 -12796435 + L1MEc LINE L1 1883 3210 -3005 301 345 17 25 chr10 127520466 127520585 -12796180 + MIR SINE MIR 1 118 -144 570 274 107 5 chr10 127520588 127520785 -12795980 - MIR SINE MIR 0 262 46 652 257 99 44 chr10 127521072 127521344 -12795421 - MER102b DNA MER1_type -20 321 35 231 36 0 0 chr10 127521529 127521557 -12795208 + (TG)n Simple_repeat Simple_repeat 1 28 0 530 193 130 25 chr10 127521935 127522096 -12794669 - MER5A DNA MER1_type -2 187 10 9173 102 16 8 chr10 127522122 127523397 -12793368 + HSMAR1 DNA Mariner 3 1287 0 331 302 176 11 chr10 127524672 127524854 -12791911 - MIR SINE MIR -2 260 49 1207 232 56 7 chr10 127524925 127525209 -12791556 - MLT1C LTR MaLR -1 466 169 1411 133 48 44 chr10 127525219 127525468 -12791297 + THE1B LTR MaLR 115 364 0 342 235 78 17 chr10 127525468 127525583 -12791182 - MLT1C LTR MaLR -335 170 49 6861 133 11 8 chr10 127525655 127526719 -12790046 + Tigger1 DNA MER2_type 1351 2418 0 220 264 0 19 chr10 127528489 127528542 -12788223 + MIR3 SINE MIR 111 162 -46 609 268 48 12 chr10 127528592 127528760 -12788005 - MER91A DNA MER1_type -10 186 13 2902 85 0 0 chr10 127528760 127529135 -12787630 - THE1C LTR MaLR 0 375 1 1041 135 31 74 chr10 127529222 127529451 -12787314 + MER20 DNA MER1_type 1 219 0 806 222 100 23 chr10 127530110 127530371 -12786394 + L1MCc LINE L1 25 305 -6118 3614 127 23 5 chr10 127530371 127530930 -12785835 + LTR24B LTR ERV1 1 569 -7 688 286 84 11 chr10 127530930 127531217 -12785548 + L1MCc LINE L1 302 609 -5814 2580 233 69 38 chr10 127531230 127531603 -12785162 + L1MCc LINE L1 659 1019 -5464 3894 145 66 26 chr10 127531603 127532360 -12784405 + LTR48 LTR ERV1 1 787 0 2580 233 69 38 chr10 127532360 127532888 -12783877 + L1MCc LINE L1 1019 1592 -4891 5117 140 44 21 chr10 127533269 127533804 -12782961 + MER4D LTR ERV1 1 565 -338 1762 183 10 0 chr10 127533804 127534105 -12782660 - AluJo SINE Alu -8 304 1 5117 140 44 21 chr10 127534105 127534452 -12782313 + MER4D LTR ERV1 565 903 0 1598 255 130 7 chr10 127534757 127535309 -12781456 - L1ME3A LINE L1 -41 6129 5510 432 302 70 0 chr10 127535461 127535672 -12781093 + MIR SINE MIR 7 236 -26 202 259 0 35 chr10 127536131 127536189 -12780576 - L2 LINE L2 -5 3308 3253 2230 76 0 35 chr10 127537080 127537369 -12779396 + AluSx SINE Alu 2 280 -32 760 288 93 16 chr10 127537516 127537947 -12778818 + LTR16B LTR ERVL 1 464 0 395 298 21 53 chr10 127538054 127538242 -12778523 + MIR SINE MIR 60 241 -21 273 265 276 32 chr10 127538224 127538409 -12778356 - MIR SINE MIR -27 235 6 * 873 218 56 0 chr10 127539622 127539801 -12776964 - MER5A DNA MER1_type 0 189 1 710 263 80 0 chr10 127540554 127540767 -12775998 + HAL1 LINE L1 3 232 -2275 2076 257 149 34 chr10 127540908 127541948 -12774817 + HAL1 LINE L1 418 1577 -930 1012 227 118 0 chr10 127542126 127542355 -12774410 + LTR16C LTR ERVL 236 491 0 1174 278 92 16 chr10 127542355 127542791 -12773974 + HAL1 LINE L1 1595 2063 -444 437 316 96 45 chr10 127542808 127542954 -12773811 + HAL1 LINE L1 2133 2270 -237 2362 69 3 3 chr10 127542954 127543242 -12773523 + AluSp SINE Alu 1 288 -25 437 316 96 45 chr10 127543242 127543427 -12773338 + HAL1 LINE L1 2270 2481 -26 238 305 66 82 chr10 127543477 127543733 -12773032 + L2 LINE L2 3014 3265 -7 214 261 0 0 chr10 127543917 127543963 -12772802 + (TG)n Simple_repeat Simple_repeat 1 46 0 223 259 65 50 chr10 127544073 127544212 -12772553 + MER5B DNA MER1_type 2 142 -36 232 340 69 62 chr10 127544765 127545183 -12771582 - L2 LINE L2 -10 3303 2883 302 286 105 38 chr10 127545803 127545936 -12770829 - L2 LINE L2 0 3313 3172 2770 157 0 30 chr10 127545950 127546389 -12770376 + MSTC LTR MaLR 1 426 -2 405 282 57 24 chr10 127547235 127547359 -12769406 + L2 LINE L2 3138 3265 -7 2419 221 52 9 chr10 127548015 127548571 -12768194 + MER74B LTR ERVL 43 622 0 23 0 0 0 chr10 127548896 127548919 -12767846 + AT_rich Low_complexity Low_complexity 1 23 0 218 337 12 12 chr10 127549504 127549587 -12767178 + MIR SINE MIR 168 250 -12 352 221 21 65 chr10 127549839 127549957 -12766808 + MIR SINE MIR 32 148 -60 271 311 212 7 chr10 127550734 127550885 -12765880 - MIR3 SINE MIR -24 184 3 2401 94 0 0 chr10 127551487 127551795 -12764970 + AluSx SINE Alu 1 308 -4 403 344 62 12 chr10 127553170 127553330 -12763435 + MIR SINE MIR 23 190 -72 2838 10 0 0 chr10 127553332 127553637 -12763128 + AluYb8 SINE Alu 1 305 -13 1047 209 62 0 chr10 127553723 127553934 -12762831 - MER58A DNA MER1_type 0 224 1 270 252 130 23 chr10 127554190 127554321 -12762444 + MLT1H1 LTR MaLR 406 550 -5 491 314 20 16 chr10 127554325 127554556 -12762209 + Charlie8 DNA MER1_type 90 275 -2142 308 258 0 0 chr10 127554560 127554626 -12762139 + Charlie8 DNA MER1_type 1351 1416 -1001 447 299 109 42 chr10 127554722 127555124 -12761641 + MLT1J2 LTR MaLR 1 429 -21 320 280 136 23 chr10 127555130 127555262 -12761503 - MIR SINE MIR -51 211 65 1636 260 137 10 chr10 127555288 127555792 -12760973 + MER69 DNA AcHobo 1 568 -1958 1141 210 109 34 chr10 127555795 127556181 -12760584 + MER69 DNA AcHobo 2015 2429 -97 1443 138 59 4 chr10 127557512 127557766 -12758999 + L1MB3 LINE L1 5913 6180 -3 235 280 27 27 chr10 127557881 127557956 -12758809 - MER5B DNA MER1_type -77 101 27 244 295 70 39 chr10 127558015 127558144 -12758621 + L2 LINE L2 3179 3311 -2 367 312 43 14 chr10 127558962 127559100 -12757665 - L2 LINE L2 0 3313 3172 747 218 0 13 chr10 127559100 127559116 -12757649 - L1MA10 LINE L1 -1 6333 6318 3151 229 24 18 chr10 127559116 127559875 -12756890 - L1ME1 LINE L1 -6 6160 5398 517 311 123 5 chr10 127561559 127561771 -12754994 - MIR SINE MIR -19 243 7 1435 219 52 12 chr10 127563070 127563398 -12753367 - MER58B DNA MER1_type 0 341 1 183 185 167 19 chr10 127563443 127563497 -12753268 - L2 LINE L2 -73 3240 3179 185 213 38 62 chr10 127563746 127563826 -12752939 + L2 LINE L2 3189 3266 -47 597 197 154 43 chr10 127563866 127564054 -12752711 - MER3 DNA MER1_type 0 209 1 245 246 116 7 chr10 127564873 127565008 -12751757 + HAL1b LINE L1 482 575 -773 229 286 11 11 chr10 127565068 127565159 -12751606 - HAL1b LINE L1 -1197 151 61 225 0 0 0 chr10 127565370 127565395 -12751370 + (TA)n Simple_repeat Simple_repeat 1 25 0 1871 239 122 56 chr10 127566028 127566925 -12749840 + L1MC5 LINE L1 6628 7528 -433 4265 73 2 48 chr10 127567142 127567719 -12749046 + L1PA8 LINE L1 5620 6169 -3 211 322 33 11 chr10 127567880 127567970 -12748795 + MER5A DNA MER1_type 97 188 -1 679 224 78 0 chr10 127567979 127568186 -12748579 + MER5A DNA MER1_type 3 189 0 219 311 59 117 chr10 127569308 127569649 -12747116 - L2 LINE L2 -39 3233 2913 386 303 56 51 chr10 127569807 127570041 -12746724 - MIR SINE MIR -6 256 22 245 308 128 73 chr10 127571059 127571534 -12745231 - L2 LINE L2 0 3272 2771 772 160 27 7 chr10 127571548 127571698 -12745067 - MER5B DNA MER1_type -6 172 20 222 150 0 0 chr10 127571698 127571738 -12745027 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 245 289 0 24 chr10 127571896 127571979 -12744786 + MIR SINE MIR 10 90 -172 224 262 47 28 chr10 127572022 127572129 -12744636 - L2 LINE L2 -592 2722 2614 292 351 96 56 chr10 127572277 127572412 -12744353 - L3 LINE CR1 -220 1357 1229 2291 90 0 10 chr10 127572412 127572712 -12744053 - AluSg SINE Alu -13 297 1 292 351 96 56 chr10 127572712 127572827 -12743938 - L3 LINE CR1 -348 1229 1097 353 307 92 12 chr10 127573245 127573408 -12743357 - MIR SINE MIR -4 258 83 9047 169 13 20 chr10 127573507 127579798 -12736967 + L1PA10 LINE L1 2 6463 -20 180 0 0 0 chr10 127579798 127579818 -12736947 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 9047 169 13 20 chr10 127579818 127579833 -12736932 + L1PA10 LINE L1 6463 6477 -6 260 254 54 54 chr10 127579974 127580159 -12736606 + L2 LINE L2 3129 3313 0 595 269 128 18 chr10 127580252 127580471 -12736294 + MIR SINE MIR 19 261 -1 220 348 43 0 chr10 127580560 127580629 -12736136 - L2 LINE L2 -40 3232 3161 1406 205 43 36 chr10 127580763 127581114 -12735651 + MSTD LTR MaLR 1 396 0 189 0 0 0 chr10 127582358 127582379 -12734386 + (A)n Simple_repeat Simple_repeat 1 21 0 2266 117 3 0 chr10 127582384 127582684 -12734081 + AluSq SINE Alu 1 301 -12 338 268 64 25 chr10 127583430 127583587 -12733178 - L1ME4a LINE L1 -148 5973 5811 1025 194 104 5 chr10 127583757 127583968 -12732797 - MER46A DNA MER2_type -3 233 2 26 0 0 0 chr10 127584071 127584097 -12732668 + AT_rich Low_complexity Low_complexity 1 26 0 2128 130 3 0 chr10 127584550 127584850 -12731915 + AluSx SINE Alu 1 301 -11 198 223 58 78 chr10 127584898 127585001 -12731764 - L2 LINE L2 -62 3251 3151 310 401 28 22 chr10 127585368 127585685 -12731080 - HAL1b LINE L1 -662 686 368 394 324 72 44 chr10 127585700 127586018 -12730747 - HAL1b LINE L1 -962 386 60 383 259 52 26 chr10 127586390 127586506 -12730259 + L2 LINE L2 3152 3270 -2 282 29 0 0 chr10 127587073 127587108 -12729657 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 432 0 0 0 chr10 127587107 127587155 -12729610 + (CA)n Simple_repeat Simple_repeat 1 48 0 393 237 88 44 chr10 127588917 127589031 -12727734 + LTR8A LTR ERV1 609 727 0 192 311 0 0 chr10 127589031 127589076 -12727689 + L2 LINE L2 3223 3267 -5 2328 114 3 0 chr10 127589120 127589428 -12727337 + AluSq SINE Alu 1 309 -4 2424 105 0 9 chr10 127590477 127590792 -12725973 + AluSx SINE Alu 1 312 0 383 331 15 31 chr10 127590951 127591081 -12725684 + L2 LINE L2 3140 3267 -5 312 343 160 11 chr10 127591327 127591502 -12725263 + MIR3 SINE MIR 2 202 -6 2482 63 0 41 chr10 127593003 127593322 -12723443 - AluY SINE Alu -5 306 1 203 312 50 78 chr10 127593367 127593508 -12723257 - MIR SINE MIR -2 260 124 472 115 83 31 chr10 127593517 127593613 -12723152 - AluSc SINE Alu -194 115 15 1672 188 3 25 chr10 127644657 127644976 -12671789 - AluJb SINE Alu 0 312 1 456 141 0 11 chr10 127645187 127645279 -12671486 - AluSp/q SINE Alu -3 310 220 535 139 0 0 chr10 127646241 127646320 -12670445 - AluS SINE Alu -233 80 2 1414 128 10 5 chr10 127646543 127646747 -12670018 + AluSg/x SINE Alu 85 289 -23 396 98 16 0 chr10 127646963 127647024 -12669741 - L1MD2 LINE L1 -10 6349 6288 1632 131 21 25 chr10 127647024 127647306 -12669459 + AluSx SINE Alu 1 281 -31 201 324 9 9 chr10 127647321 127647426 -12669339 + CT-rich Low_complexity Low_complexity 5 109 0 584 303 73 28 chr10 127648209 127648526 -12668239 + L1MEc LINE L1 35 365 -6031 741 161 103 203 chr10 127648803 127648914 -12667851 + AluJo SINE Alu 5 125 -194 1935 162 7 3 chr10 127648914 127649223 -12667542 - AluJb SINE Alu -2 310 1 741 161 103 203 chr10 127649223 127649457 -12667308 + AluJo SINE Alu 125 319 0 21 0 0 0 chr10 127650750 127650771 -12665994 + AT_rich Low_complexity Low_complexity 1 21 0 1499 186 81 3 chr10 127650778 127651063 -12665702 + AluJo SINE Alu 6 312 0 726 192 0 0 chr10 127651123 127651248 -12665517 + FLAM_C SINE Alu 1 125 -8 1188 176 46 0 chr10 127651518 127651780 -12664985 + AluSg SINE Alu 1 274 -36 1778 168 0 7 chr10 127652398 127652695 -12664070 + AluJb SINE Alu 1 295 -17 195 204 0 0 chr10 127652696 127652740 -12664025 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 561 252 80 73 chr10 127653233 127653541 -12663224 + L1M4 LINE L1 4202 4517 -1629 2052 142 0 19 chr10 127653541 127653852 -12662913 + AluJb SINE Alu 1 305 -7 561 252 80 73 chr10 127653852 127654090 -12662675 + L1M4 LINE L1 4517 4752 -1394 28 0 0 0 chr10 127654118 127654146 -12662619 + AT_rich Low_complexity Low_complexity 1 28 0 2007 129 6 22 chr10 127654354 127654665 -12662100 + AluSx SINE Alu 7 312 0 1365 199 130 49 chr10 127654963 127655371 -12661394 + MLT1D LTR MaLR 65 505 0 191 330 52 17 chr10 127656006 127656121 -12660644 - L2 LINE L2 -4 3309 3191 1515 203 58 21 chr10 127656123 127656485 -12660280 + L1MD2 LINE L1 5756 6011 -167 2264 82 0 4 chr10 127656486 127656767 -12659998 + AluY SINE Alu 1 280 -31 198 0 0 0 chr10 127659142 127659164 -12657601 + (T)n Simple_repeat Simple_repeat 1 22 0 267 133 0 0 chr10 127659359 127659404 -12657361 - L2 LINE L2 0 3313 3269 405 0 0 0 chr10 127659969 127660014 -12656751 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1981 122 16 7 chr10 127660216 127660520 -12656245 - AluSx SINE Alu -5 307 1 198 0 0 0 chr10 127660568 127660590 -12656175 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 5892 19 0 2 chr10 127660600 127661224 -12655541 - SVA Other Other -8 1378 756 461 287 115 61 chr10 127662043 127662578 -12654187 + L1M4 LINE L1 4405 5015 -1131 2010 143 0 3 chr10 127662578 127662879 -12653886 + AluSx SINE Alu 9 308 -4 461 287 115 61 chr10 127662879 127663291 -12653474 + L1M4 LINE L1 5015 5403 -743 386 279 126 38 chr10 127663660 127663830 -12652935 - L2 LINE L2 -830 2484 2282 3971 117 30 12 chr10 127663830 127664422 -12652343 - LTR26 LTR ERV1 0 603 1 386 279 126 38 chr10 127664422 127664513 -12652252 - L2 LINE L2 -1032 2282 2200 1491 166 31 110 chr10 127665204 127665595 -12651170 - L1MD3 LINE L1 -7 7988 7629 275 270 112 45 chr10 127665670 127665848 -12650917 + L2 LINE L2 3124 3313 0 2381 37 40 24 chr10 127665869 127666167 -12650598 - AluY SINE Alu -8 303 1 969 111 0 0 chr10 127666442 127666568 -12650197 + AluSg/x SINE Alu 165 290 -20 1741 169 7 7 chr10 127666615 127666894 -12649871 + AluJo SINE Alu 9 287 -25 467 104 0 15 chr10 127667506 127667573 -12649192 + MER20 DNA MER1_type 3 68 -151 291 255 106 71 chr10 127668425 127668566 -12648199 + MIR SINE MIR 117 262 0 1398 99 0 42 chr10 127669592 127669807 -12646958 - AluSq SINE Alu 0 306 100 202 238 38 50 chr10 127669934 127670094 -12646671 + G-rich Low_complexity Low_complexity 3 160 0 21 0 0 0 chr10 127670094 127670115 -12646650 + GC_rich Low_complexity Low_complexity 1 21 0 205 181 0 42 chr10 127670126 127670198 -12646567 + G-rich Low_complexity Low_complexity 1 69 0 40 89 0 0 chr10 127670203 127670282 -12646483 + GC_rich Low_complexity Low_complexity 1 79 0 272 257 0 0 chr10 127670307 127670381 -12646384 + G-rich Low_complexity Low_complexity 1 74 0 739 224 5 0 chr10 127670403 127670613 -12646152 + AluSg/x SINE Alu 85 295 -17 721 221 39 7 chr10 127670613 127670767 -12645998 + MER58B DNA MER1_type 181 339 -2 2022 149 34 60 chr10 127670920 127671171 -12645594 + L1MA4 LINE L1 5896 6133 -167 2354 105 0 0 chr10 127671171 127671477 -12645288 + AluSx SINE Alu 5 310 -2 2022 149 34 60 chr10 127671477 127671641 -12645124 + L1MA4 LINE L1 6133 6300 0 1003 163 0 0 chr10 127671675 127671828 -12644937 + AluJo SINE Alu 1 153 -159 1949 170 3 0 chr10 127672333 127672639 -12644126 + AluJb SINE Alu 1 307 -5 817 145 0 15 chr10 127672682 127672813 -12643952 + FLAM_C SINE Alu 1 129 -4 21 36 0 0 chr10 127672813 127672841 -12643924 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 127673044 127673079 -12643686 + AT_rich Low_complexity Low_complexity 1 35 0 1849 142 7 17 chr10 127673123 127673425 -12643340 + AluJo SINE Alu 1 299 -13 234 282 162 26 chr10 127673648 127673765 -12643000 - MIR SINE MIR -27 235 103 962 236 39 0 chr10 127673905 127674113 -12642652 + MER58A DNA MER1_type 9 224 0 1718 168 39 0 chr10 127674207 127674493 -12642272 - AluJo SINE Alu -15 297 1 1198 183 88 21 chr10 127674507 127674747 -12642018 - AluJb SINE Alu -20 292 37 1988 179 88 26 chr10 127675304 127675745 -12641020 - MLT1C LTR MaLR -1 459 1 1007 201 20 0 chr10 127675936 127676135 -12640630 + MER2 DNA MER2_type 2 204 -141 2169 125 0 3 chr10 127676136 127676439 -12640326 - AluSx SINE Alu -10 302 1 359 191 44 15 chr10 127676461 127676529 -12640236 + MER2 DNA MER2_type 273 342 -3 1135 157 0 20 chr10 127676801 127676998 -12639767 - AluSg/x SINE Alu -19 293 101 1006 146 0 0 chr10 127677232 127677406 -12639359 + AluSg/x SINE Alu 140 313 0 2427 74 3 0 chr10 127677856 127678153 -12638612 - AluY SINE Alu -13 298 1 4127 169 43 35 chr10 127679817 127680685 -12636080 - L1MB7 LINE L1 -10 6174 5300 532 217 72 36 chr10 127680763 127680929 -12635836 + MER96B DNA MER1_type? 242 413 -4 201 94 0 0 chr10 127681769 127681801 -12634964 + (CGGA)n Simple_repeat Simple_repeat 3 34 0 225 0 0 0 chr10 127682207 127682232 -12634533 + (T)n Simple_repeat Simple_repeat 1 25 0 219 69 0 0 chr10 127684326 127684355 -12632410 + (TG)n Simple_repeat Simple_repeat 1 29 0 251 239 38 5 chr10 127686433 127686527 -12630238 - MLT1J LTR MaLR -2 509 427 1310 93 0 0 chr10 127687244 127687406 -12629359 + AluSq SINE Alu 1 162 -151 2267 121 0 0 chr10 127687568 127687866 -12628899 + AluSx SINE Alu 1 298 -14 228 182 0 0 chr10 127687920 127687964 -12628801 + (TCCA)n Simple_repeat Simple_repeat 2 45 0 404 267 168 72 chr10 127687964 127688297 -12628468 - L2 LINE L2 0 3313 2949 464 209 119 15 chr10 127688305 127688439 -12628326 - L1MC4a LINE L1 -1964 5844 5697 557 261 79 75 chr10 127688440 127688667 -12628098 - L1ME4a LINE L1 -296 5825 5600 2012 98 66 11 chr10 127688667 127688953 -12627812 + AluSx SINE Alu 1 302 -10 557 261 79 75 chr10 127688953 127689234 -12627531 - L1ME4a LINE L1 -521 5600 5315 2187 72 43 0 chr10 127689253 127689563 -12627202 - AluY SINE Alu 0 311 1 2279 114 0 0 chr10 127689733 127690040 -12626725 + AluSx SINE Alu 2 308 -4 844 108 108 0 chr10 127690415 127690535 -12626230 + FLAM_C SINE Alu 6 138 -5 331 264 35 56 chr10 127690559 127690703 -12626062 - L1MEd LINE L1 -5479 640 500 254 200 92 0 chr10 127690898 127690963 -12625802 + HsTC2 DNA Tc2 1825 1895 -3 1710 165 6 40 chr10 127691416 127691738 -12625027 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr10 127691767 127691788 -12624977 + AT_rich Low_complexity Low_complexity 1 21 0 702 250 39 19 chr10 127691788 127692044 -12624721 + AluSp SINE Alu 1 261 -52 1470 68 0 47 chr10 127692585 127692776 -12623989 - AluY SINE Alu -129 182 1 1001 93 60 13 chr10 127692776 127692927 -12623838 + MSTB LTR MaLR 269 426 0 1823 149 55 0 chr10 127692983 127693104 -12623661 + AluJb SINE Alu 1 114 -198 192 77 0 0 chr10 127693104 127693130 -12623635 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 1823 149 55 0 chr10 127693130 127693283 -12623482 + AluJb SINE Alu 114 290 -22 2272 114 10 0 chr10 127693299 127693598 -12623167 + AluSx SINE Alu 1 302 -10 1031 184 69 28 chr10 127693700 127693918 -12622847 - AluJb SINE Alu -1 311 85 961 185 36 17 chr10 127694210 127694447 -12622318 + MER33 DNA MER1_type 1 233 -91 432 94 0 0 chr10 127694450 127694503 -12622262 + Alu SINE Alu 2 54 -255 1405 117 0 19 chr10 127694503 127694708 -12622057 + AluSg/x SINE Alu 99 299 -11 333 217 12 0 chr10 127694708 127694791 -12621974 + MER33 DNA MER1_type 267 350 -13 356 119 0 178 chr10 127694794 127694835 -12621930 + MER89 LTR ERV1 5 19 -540 1833 153 39 0 chr10 127694835 127695117 -12621648 - AluJb SINE Alu -18 294 2 356 119 0 178 chr10 127695117 127695176 -12621589 + MER89 LTR ERV1 19 87 -472 301 235 37 12 chr10 127695151 127695232 -12621533 + MER89 LTR ERV1 197 279 -280 * 341 296 0 11 chr10 127695223 127695311 -12621454 + MER92C LTR ERV1 30 116 -438 375 157 14 0 chr10 127695411 127695481 -12621284 + MER92C LTR ERV1 484 554 0 330 286 56 94 chr10 127695609 127695743 -12621022 - MLT1J LTR MaLR -183 328 205 765 189 8 0 chr10 127695743 127695870 -12620895 + FLAM_C SINE Alu 1 128 -5 330 286 56 94 chr10 127695870 127695969 -12620796 - MLT1J LTR MaLR -306 205 104 439 333 45 20 chr10 127696101 127696302 -12620463 + HAL1 LINE L1 1779 1984 -523 439 268 49 8 chr10 127696307 127696430 -12620335 - L2 LINE L2 -2 3311 3184 942 226 39 69 chr10 127696497 127696904 -12619861 - HAL1 LINE L1 -112 2395 2001 1475 173 43 151 chr10 127696989 127697056 -12619709 - MSTD LTR MaLR 0 396 323 2294 84 3 0 chr10 127697056 127697343 -12619422 + AluSp SINE Alu 1 288 -25 1475 173 43 151 chr10 127697343 127697719 -12619046 - MSTD LTR MaLR -73 323 1 269 314 29 0 chr10 127697812 127697882 -12618883 + L2 LINE L2 3143 3214 -58 1915 120 0 25 chr10 127697901 127698217 -12618548 - AluY SINE Alu -3 308 1 1048 180 0 0 chr10 127698399 127698560 -12618205 - FRAM SINE Alu -5 161 1 976 201 114 63 chr10 127698744 127699234 -12617531 + MER39 LTR ERV1 2 707 0 1358 200 143 0 chr10 127699552 127699662 -12617103 + MER34B LTR ERV1 36 127 -438 2275 113 29 63 chr10 127699662 127699959 -12616806 + MER47A DNA MER2_type 1 284 -2039 2281 89 0 0 chr10 127699959 127700250 -12616515 - AluSc SINE Alu -18 291 1 2275 113 29 63 chr10 127700250 127700331 -12616434 + MER47A DNA MER2_type 284 366 0 1358 200 143 0 chr10 127700331 127700783 -12615982 + MER34B LTR ERV1 127 565 0 277 128 43 0 chr10 127700976 127701023 -12615742 - MER57A LTR ERV1 -67 336 288 237 119 0 51 chr10 127701667 127701726 -12615039 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 1567 182 34 17 chr10 127701726 127702023 -12614742 - AluJo SINE Alu -6 306 5 189 350 0 0 chr10 127702343 127702423 -12614342 - MIR SINE MIR -14 248 169 741 258 120 51 chr10 127702671 127702886 -12613879 - L2 LINE L2 0 3313 3114 1913 159 24 0 chr10 127702886 127703181 -12613584 + AluJo SINE Alu 1 302 -10 741 258 120 51 chr10 127703181 127703571 -12613194 - L2 LINE L2 -199 3114 2658 1157 210 111 58 chr10 127703571 127703967 -12612798 - LTR16A LTR ERVL 0 450 34 668 244 41 0 chr10 127704001 127704198 -12612567 - L2 LINE L2 -656 2658 2454 1830 140 3 14 chr10 127704464 127704750 -12612015 + AluJo SINE Alu 4 286 -26 272 348 58 7 chr10 127705024 127705162 -12611603 - MIR SINE MIR -45 217 73 579 246 125 26 chr10 127705379 127705611 -12611154 + MIR SINE MIR 8 262 0 2079 99 3 77 chr10 127705754 127706078 -12610687 + AluSx SINE Alu 1 300 -12 203 231 0 0 chr10 127706145 127706184 -12610581 + GA-rich Low_complexity Low_complexity 3 41 0 2425 52 16 10 chr10 127706864 127707173 -12609592 + AluY SINE Alu 1 311 0 2083 130 0 3 chr10 127707361 127707660 -12609105 - AluSx SINE Alu -14 298 1 341 268 98 0 chr10 127708056 127708179 -12608586 + MIR SINE MIR 114 248 -14 368 123 6 18 chr10 127708400 127708467 -12608298 - L1M3 LINE L1 -472 5696 5628 910 212 78 16 chr10 127708940 127709195 -12607570 + L1MC4a LINE L1 5693 5963 -1845 652 302 50 80 chr10 127710224 127710518 -12606247 + L1M4 LINE L1 2236 2537 -3609 925 126 0 30 chr10 127710518 127710653 -12606112 + FLAM_C SINE Alu 1 131 -2 652 302 50 80 chr10 127710653 127710994 -12605771 + L1M4 LINE L1 2537 2886 -3260 2022 239 89 40 chr10 127710994 127711591 -12605174 + MLT1E2 LTR MaLR 1 626 0 652 302 50 80 chr10 127711591 127711676 -12605089 + L1M4 LINE L1 2886 2972 -3174 2036 224 117 29 chr10 127711676 127711830 -12604935 - MLT1E LTR MaLR 0 593 454 2039 148 0 0 chr10 127711830 127712128 -12604637 - AluJb SINE Alu -14 298 1 2036 224 117 29 chr10 127712128 127712518 -12604247 - MLT1E LTR MaLR -139 454 1 652 302 50 80 chr10 127712518 127712748 -12604017 + L1M4 LINE L1 2972 3160 -2986 643 212 15 7 chr10 127712944 127713081 -12603684 + MLT1J LTR MaLR 374 511 0 1773 158 0 14 chr10 127713268 127713560 -12603205 - AluJb SINE Alu -24 288 1 2381 90 0 0 chr10 127713751 127714050 -12602715 - AluY SINE Alu -12 299 1 351 261 136 43 chr10 127715421 127715605 -12601160 - MIR3 SINE MIR 0 208 8 239 184 13 53 chr10 127715874 127715950 -12600815 - L1MC4 LINE L1 -1335 6707 6635 1409 122 10 5 chr10 127716977 127717182 -12599583 + AluSg/x SINE Alu 106 311 -1 281 232 16 35 chr10 127717521 127717613 -12599152 - L1MC5 LINE L1 0 7995 7843 2067 93 70 103 chr10 127717626 127718014 -12598751 + THE1C LTR MaLR 1 375 0 283 318 47 0 chr10 127718648 127718733 -12598032 - MIR SINE MIR -110 152 64 1379 148 148 4 chr10 127718937 127719180 -12597585 + AluJo SINE Alu 1 278 -34 1006 106 0 0 chr10 127719183 127719315 -12597450 - AluSq/x SINE Alu -180 132 1 482 291 153 36 chr10 127720120 127720446 -12596319 + L1ME LINE L1 5313 5698 -423 2524 77 0 3 chr10 127720446 127720756 -12596009 + AluSx SINE Alu 1 309 -3 482 291 153 36 chr10 127720756 127720842 -12595923 + L1ME LINE L1 5698 5773 -348 182 365 0 0 chr10 127721234 127721286 -12595479 - MIR SINE MIR -129 79 28 300 306 35 0 chr10 127721366 127721451 -12595314 - MIR SINE MIR -65 143 56 750 167 53 0 chr10 127721631 127721745 -12595020 + AluJo/FLAM SINE Alu 1 120 -192 2338 71 14 0 chr10 127721745 127722039 -12594726 - AluY SINE Alu -13 298 1 1590 159 59 7 chr10 127722261 127722550 -12594215 + AluJo SINE Alu 1 304 -8 853 92 33 0 chr10 127722697 127722817 -12593948 - L1MA8 LINE L1 -3 6288 6165 220 403 16 8 chr10 127722822 127722951 -12593814 - MIR SINE MIR -61 147 18 317 103 224 0 chr10 127723289 127723347 -12593418 + THE1C LTR MaLR 1 71 -304 2845 60 11 6 chr10 127723375 127723728 -12593037 + THE1C LTR MaLR 21 375 0 339 266 70 26 chr10 127724863 127725039 -12591726 + L1ME LINE L1 462 644 -5886 317 302 88 58 chr10 127725550 127725961 -12590804 + L1ME LINE L1 1276 1698 -4842 499 322 91 21 chr10 127726288 127726530 -12590235 + MIR SINE MIR 4 262 0 192 77 0 0 chr10 127726961 127726987 -12589778 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 840 175 0 21 chr10 127727574 127727717 -12589048 + FLAM_C SINE Alu 2 141 -2 675 102 71 0 chr10 127727780 127727878 -12588887 - AluSc SINE Alu -10 299 195 828 196 0 0 chr10 127729123 127729256 -12587509 + FLAM_C SINE Alu 1 133 0 2308 97 0 3 chr10 127729538 127729836 -12586929 + AluY SINE Alu 1 297 -14 870 234 44 44 chr10 127729959 127730207 -12586558 + MIR SINE MIR 15 262 0 320 355 0 16 chr10 127730493 127730614 -12586151 - MIR3 SINE MIR -87 121 3 255 239 190 11 chr10 127730764 127730948 -12585817 + L1ME2 LINE L1 5254 5470 -2338 423 284 94 94 chr10 127731074 127731321 -12585444 + L1ME2 LINE L1 5477 5723 -398 1804 187 63 57 chr10 127731321 127731780 -12584985 + MLT1C LTR MaLR 5 466 -1 423 284 94 94 chr10 127731780 127731874 -12584891 + L1ME2 LINE L1 5723 5821 -300 1564 195 6 41 chr10 127731874 127732192 -12584573 + AluJo SINE Alu 1 307 -5 423 284 94 94 chr10 127732192 127732233 -12584532 + L1ME2 LINE L1 5820 5860 -261 1812 153 7 3 chr10 127733230 127733518 -12583247 + AluJo SINE Alu 1 289 -23 882 196 35 133 chr10 127733685 127734001 -12582764 + L1ME2 LINE L1 5848 6132 -32 1891 146 4 0 chr10 127734001 127734282 -12582483 + AluJo SINE Alu 7 288 -24 2130 80 39 11 chr10 127734359 127734645 -12582120 + AluSx SINE Alu 1 294 -18 2303 98 0 0 chr10 127735223 127735518 -12581247 + AluSx SINE Alu 1 295 -17 194 167 167 0 chr10 127736214 127736262 -12580503 + MIR SINE MIR 157 212 -50 23 54 0 0 chr10 127737320 127737357 -12579408 + AT_rich Low_complexity Low_complexity 1 37 0 329 248 124 9 chr10 127737519 127737632 -12579133 - MIR SINE MIR -45 217 92 566 160 0 10 chr10 127737635 127737735 -12579030 + FLAM_A SINE Alu 38 136 -6 302 250 59 0 chr10 127737840 127737908 -12578857 - MER81 DNA DNA -42 72 1 1211 281 100 14 chr10 127738575 127739127 -12577638 - L1MC4a LINE L1 -1899 5909 5311 2285 107 0 0 chr10 127739778 127740077 -12576688 + AluSq SINE Alu 1 299 -14 433 191 11 45 chr10 127740352 127740474 -12576291 + FLAM_C SINE Alu 28 146 0 1867 158 3 0 chr10 127741394 127741679 -12575086 + AluSx SINE Alu 1 286 -26 446 120 74 65 chr10 127742263 127742371 -12574394 - MER96B DNA MER1_type? -292 125 17 1133 180 150 10 chr10 127742772 127743066 -12573699 + L1M4 LINE L1 5011 5345 -801 2254 101 3 13 chr10 127745214 127745520 -12571245 - AluSx SINE Alu -9 303 1 735 219 107 15 chr10 127745833 127746029 -12570736 - MIR SINE MIR 0 262 49 336 212 15 0 chr10 127746103 127746169 -12570596 + Charlie8 DNA MER1_type 118 184 -2233 577 293 19 28 chr10 127746878 127747090 -12569675 - MIR SINE MIR -16 246 37 1933 124 22 32 chr10 127747159 127747473 -12569292 - AluSx SINE Alu -1 311 1 324 204 175 19 chr10 127747473 127747576 -12569189 + LTR50 LTR ERVL 87 205 -590 305 102 0 0 chr10 127747605 127747654 -12569111 + Alu SINE Alu 250 298 -2 22 70 0 0 chr10 127748103 127748146 -12568619 + AT_rich Low_complexity Low_complexity 1 43 0 293 278 179 31 chr10 127748223 127748385 -12568380 - MIR SINE MIR -30 232 47 2007 107 7 23 chr10 127749435 127749734 -12567031 + AluSx SINE Alu 1 294 -18 759 296 89 47 chr10 127750519 127751185 -12565580 + L1ME LINE L1 4320 5013 -1133 298 237 87 135 chr10 127751438 127751906 -12564859 + L1ME LINE L1 5327 5773 -348 973 207 78 96 chr10 127752058 127752445 -12564320 - MLT1L LTR MaLR -91 524 145 1125 181 0 15 chr10 127752692 127752897 -12563868 - AluJb SINE Alu -2 310 109 264 317 132 26 chr10 127753186 127753413 -12563352 - L1MC4a LINE L1 -1894 5914 5664 247 204 0 0 chr10 127753441 127753485 -12563280 - L1MC4a LINE L1 -637 5529 5486 1381 163 9 0 chr10 127753493 127753708 -12563057 - AluSg/x SINE Alu -9 301 85 425 248 63 38 chr10 127753714 127753879 -12562886 - L1MC4a LINE L1 -689 5481 5322 2157 110 13 19 chr10 127753879 127754187 -12562578 - AluSg SINE Alu -3 307 2 425 248 63 38 chr10 127754187 127754347 -12562418 - L1MC4a LINE L1 -848 5322 5124 43 64 0 0 chr10 127754370 127754448 -12562317 + AT_rich Low_complexity Low_complexity 1 78 0 421 195 141 8 chr10 127754597 127754725 -12562040 - L1MC4a LINE L1 -1033 5113 4969 353 304 85 5 chr10 127754728 127754870 -12561895 - L1M4 LINE L1 -519 5651 5501 369 250 0 18 chr10 127754941 127755053 -12561712 - L1M4 LINE L1 -1549 4597 4488 926 133 0 15 chr10 127755532 127755667 -12561098 + FLAM_A SINE Alu 1 133 0 204 67 0 0 chr10 127758123 127758153 -12558612 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 332 269 66 30 chr10 127758189 127758356 -12558409 + L1MEc LINE L1 1809 1981 -4415 1093 214 66 52 chr10 127758361 127758559 -12558206 + L1MEc LINE L1 2960 3154 -3061 2135 95 3 20 chr10 127758559 127758853 -12557912 + AluSg SINE Alu 1 289 -21 1093 214 66 52 chr10 127758853 127759128 -12557637 + L1MEc LINE L1 3154 3424 -2791 2107 97 4 0 chr10 127759128 127759397 -12557368 + AluSc SINE Alu 17 286 -23 194 0 39 0 chr10 127759400 127759426 -12557339 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1093 214 66 52 chr10 127759426 127759480 -12557285 + L1MEc LINE L1 3425 3599 -2616 935 246 143 18 chr10 127759472 127759858 -12556907 + L1ME2 LINE L1 5721 6154 -10 * 1752 149 11 0 chr10 127760021 127760290 -12556475 + AluJb SINE Alu 34 305 -7 252 0 0 0 chr10 127762444 127762472 -12554293 + (CA)n Simple_repeat Simple_repeat 2 29 0 1229 224 177 53 chr10 127763484 127764146 -12552619 - L1MC4 LINE L1 -2 8040 7297 182 154 103 0 chr10 127764443 127764482 -12552283 - MER5B DNA MER1_type -134 44 2 1026 185 11 26 chr10 127764489 127764678 -12552087 + MER5A DNA MER1_type 4 189 0 1444 143 0 42 chr10 127764909 127765168 -12551597 - AluJo SINE Alu -19 293 46 2163 107 0 4 chr10 127765191 127765472 -12551293 + AluSx SINE Alu 1 280 -32 456 253 95 38 chr10 127765523 127765681 -12551084 + MER68 LTR ERV1 396 562 0 1920 214 83 34 chr10 127765685 127766607 -12550158 - L1ME1 LINE L1 -332 5834 4857 2451 66 10 0 chr10 127766616 127766920 -12549845 + AluSx SINE Alu 1 307 -5 435 163 62 0 chr10 127766931 127767011 -12549754 + L1MB4 LINE L1 5844 5928 -252 * 1257 203 86 84 chr10 127766996 127767028 -12549737 - L1ME1 LINE L1 -2702 3444 3414 1769 175 97 56 chr10 127767028 127767513 -12549252 + MLT1D LTR MaLR 1 505 0 1257 203 86 84 chr10 127767513 127768052 -12548713 - L1ME1 LINE L1 -2732 3414 2872 1417 220 65 25 chr10 127768064 127768432 -12548333 - L1ME1 LINE L1 -3384 2762 2380 1550 127 5 0 chr10 127768462 127768674 -12548091 + AluSx SINE Alu 1 213 -99 2944 168 34 31 chr10 127768674 127768946 -12547819 + L1MB7 LINE L1 5550 5820 -364 1630 165 0 54 chr10 127768946 127769261 -12547504 + AluJo SINE Alu 1 298 -14 2944 168 34 31 chr10 127769261 127769497 -12547268 + L1MB7 LINE L1 5820 6063 -121 2316 107 0 0 chr10 127769497 127769795 -12546970 + AluSx SINE Alu 1 298 -14 2944 168 34 31 chr10 127769795 127769898 -12546867 + L1MB7 LINE L1 6063 6164 -20 1505 114 5 5 chr10 127769916 127770127 -12546638 + AluSg/x SINE Alu 81 291 -19 2269 93 0 7 chr10 127770164 127770474 -12546291 + AluSg SINE Alu 1 308 -2 435 284 65 35 chr10 127770987 127771156 -12545609 + MER97a DNA MER1_type? 1 174 -720 2014 141 0 3 chr10 127771295 127771599 -12545166 + AluSx SINE Alu 1 303 -9 419 297 168 51 chr10 127771669 127772309 -12544456 - L2 LINE L2 -5 3267 2561 2096 108 42 20 chr10 127772317 127772445 -12544320 + AluSq SINE Alu 1 125 -188 2214 122 0 0 chr10 127772445 127772740 -12544025 + AluSg SINE Alu 1 295 -15 2096 108 42 20 chr10 127772740 127772917 -12543848 + AluSq SINE Alu 125 313 0 966 168 95 0 chr10 127773032 127773222 -12543543 + MER3 DNA MER1_type 1 208 -1 2325 66 7 3 chr10 127773323 127773612 -12543153 + AluSc SINE Alu 2 291 -18 351 332 145 19 chr10 127775342 127775667 -12541098 + L1M2 LINE L1 555 920 -5929 27 29 0 0 chr10 127775782 127775816 -12540949 + GC_rich Low_complexity Low_complexity 1 34 0 232 169 26 26 chr10 127776050 127776127 -12540638 + (CGCGG)n Simple_repeat Simple_repeat 5 81 0 600 150 150 8 chr10 127776272 127776392 -12540373 - AluY SINE Alu -152 159 23 1024 149 46 52 chr10 127776392 127776586 -12540179 - MSTB LTR MaLR -230 196 4 270 311 56 0 chr10 127777115 127777205 -12539560 + MLT1J LTR MaLR 103 197 -314 437 178 0 0 chr10 127777425 127777498 -12539267 + MER67D LTR ERV1 87 159 -355 1471 93 5 0 chr10 127777499 127777693 -12539072 + LTR12 LTR ERV1 80 274 -440 342 263 10 0 chr10 127777697 127777796 -12538969 + LTR30 LTR ERV1 544 643 -79 28761 104 22 11 chr10 127777796 127782693 -12534072 + Harlequin LTR ERV1 1 4944 -2001 2225 180 112 54 chr10 127782705 127783474 -12533291 + Harlequin LTR ERV1 843 1720 -5176 * 4688 102 5 0 chr10 127783469 127784109 -12532656 + Harlequin LTR ERV1 7757 8399 0 275 231 0 0 chr10 127784109 127784161 -12532604 + LTR30 LTR ERV1 1 52 -670 1439 97 14 142 chr10 127784161 127784476 -12532289 + LTR12 LTR ERV1 57 2032 -406 315 239 34 0 chr10 127784477 127784565 -12532200 + LTR30 LTR ERV1 553 643 -79 746 90 0 0 chr10 127784567 127784667 -12532098 + LTR12 LTR ERV1 615 714 0 318 214 198 43 chr10 127784669 127784856 -12531909 + MER67C LTR ERV1 188 403 -307 * 413 249 31 6 chr10 127784825 127785040 -12531725 + MER67D LTR ERV1 273 528 -15 1446 141 102 14 chr10 127785341 127785624 -12531141 - AluJb SINE Alu -2 310 3 2136 99 10 19 chr10 127785652 127785966 -12530799 + AluY SINE Alu 1 311 0 2291 81 0 0 chr10 127787323 127787606 -12529159 - AluSx SINE Alu -8 304 22 604 212 201 0 chr10 127787775 127787964 -12528801 + MIR SINE MIR 8 234 -28 581 269 96 30 chr10 127788200 127788397 -12528368 + L2 LINE L2 3103 3312 -1 345 24 0 0 chr10 127788700 127788742 -12528023 + (TG)n Simple_repeat Simple_repeat 1 42 0 2065 104 28 7 chr10 127788907 127789194 -12527571 + AluSx SINE Alu 1 293 -19 284 217 121 12 chr10 127789195 127789278 -12527487 - L2 LINE L2 -14 3299 3208 264 314 51 34 chr10 127789995 127790113 -12526652 + L2 LINE L2 3190 3309 -4 398 306 60 54 chr10 127790121 127790435 -12526330 - L2 LINE L2 -814 2500 2185 2359 89 0 22 chr10 127791521 127791837 -12524928 + AluSx SINE Alu 1 309 -3 246 205 68 87 chr10 127791887 127792048 -12524717 + L1ME4a LINE L1 5927 6084 -37 393 232 48 82 chr10 127793600 127793753 -12523012 - L1MD3 LINE L1 0 8029 7881 190 232 12 24 chr10 127793769 127793851 -12522914 + C-rich Low_complexity Low_complexity 2 82 0 432 294 29 12 chr10 127793860 127794030 -12522735 - L1MC4 LINE L1 -119 7923 7751 303 203 0 0 chr10 127794053 127794117 -12522648 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1682 178 0 11 chr10 127794120 127794396 -12522369 - AluJo SINE Alu -19 293 21 972 150 0 13 chr10 127794407 127794560 -12522205 - FRAM SINE Alu -23 153 3 22 0 0 0 chr10 127794575 127794597 -12522168 + AT_rich Low_complexity Low_complexity 1 22 0 1350 183 75 34 chr10 127794811 127795106 -12521659 - AluJo SINE Alu 0 312 6 21 57 0 0 chr10 127795119 127795154 -12521611 + AT_rich Low_complexity Low_complexity 1 35 0 368 105 0 195 chr10 127795319 127795437 -12521328 - L1ME1 LINE L1 0 6178 6077 349 274 52 22 chr10 127795435 127795484 -12521281 - L1ME LINE L1 -388 5733 5687 * 2246 108 13 0 chr10 127795484 127795789 -12520976 - AluSx SINE Alu -1 311 3 349 274 52 22 chr10 127795789 127795874 -12520891 - L1ME LINE L1 -434 5687 5595 1931 122 39 0 chr10 127795879 127796165 -12520600 + AluSp SINE Alu 1 297 -16 965 71 21 43 chr10 127796285 127796426 -12520339 - L1MA3 LINE L1 0 6305 6168 295 244 47 8 chr10 127797166 127797293 -12519472 - MER103 DNA DNA -1 165 34 1888 134 17 7 chr10 127797530 127797821 -12518944 - AluSx SINE Alu -17 295 2 212 212 15 0 chr10 127798356 127798422 -12518343 + CT-rich Low_complexity Low_complexity 2 68 0 2226 71 9 68 chr10 127798541 127798864 -12517901 - AluSp SINE Alu -9 304 1 236 360 22 11 chr10 127800177 127800266 -12516499 + L2 LINE L2 3171 3260 -12 2055 247 62 16 chr10 127800753 127801489 -12515276 - L1MC4a LINE L1 -5 7803 7034 270 222 303 0 chr10 127801650 127801749 -12515016 + MIR SINE MIR 16 144 -118 713 214 158 21 chr10 127802863 127803148 -12513617 + MER33 DNA MER1_type 1 324 0 1353 136 189 8 chr10 127805283 127805526 -12511239 + AluJb SINE Alu 1 287 -25 24 91 0 0 chr10 127807876 127807942 -12508823 + AT_rich Low_complexity Low_complexity 1 66 0 2632 216 107 59 chr10 127809030 127810033 -12506732 + L1M4 LINE L1 2 1052 -5490 1232 164 40 132 chr10 127810035 127810339 -12506426 + AluJo SINE Alu 1 276 -36 2686 227 91 48 chr10 127810352 127811209 -12505556 + L1M4 LINE L1 1042 2091 -4555 1822 148 0 63 chr10 127811209 127811327 -12505438 + AluJb SINE Alu 1 125 -187 192 40 0 0 chr10 127811327 127811352 -12505413 + (CA)n Simple_repeat Simple_repeat 1 25 0 1822 148 0 63 chr10 127811352 127811564 -12505201 + AluJb SINE Alu 125 310 -2 2686 227 91 48 chr10 127811564 127812173 -12504592 + L1M4 LINE L1 2091 2672 -3974 1758 168 17 0 chr10 127812511 127812803 -12503962 - AluJb SINE Alu -13 299 3 207 0 0 0 chr10 127813429 127813452 -12503313 + (T)n Simple_repeat Simple_repeat 1 23 0 1335 61 6 0 chr10 127814290 127814455 -12502310 + AluY SINE Alu 131 296 -15 841 111 8 0 chr10 127814547 127814664 -12502101 + FLAM_C SINE Alu 1 118 -15 310 196 42 42 chr10 127814823 127814991 -12501774 + (TTATA)n Simple_repeat Simple_repeat 3 170 0 279 296 0 25 chr10 127816230 127816311 -12500454 + Charlie1 DNA MER1_type 1 79 -2682 * 1891 194 104 14 chr10 127816302 127816869 -12499896 + Charlie1 DNA MER1_type 2144 2761 0 589 249 71 43 chr10 127817769 127818022 -12498743 - MIR SINE MIR -2 260 1 434 252 177 13 chr10 127818045 127818362 -12498403 + L1ME4a LINE L1 5678 6046 -75 2038 120 55 19 chr10 127818572 127818897 -12497868 + MER1B DNA MER1_type 1 337 0 2066 109 42 0 chr10 127819424 127819709 -12497056 - AluSq SINE Alu -16 297 1 2379 99 3 0 chr10 127820315 127820618 -12496147 - AluSx SINE Alu -8 304 1 459 194 339 16 chr10 127821042 127821228 -12495537 - MIR SINE MIR -1 261 16 1982 88 53 170 chr10 127821230 127821743 -12495022 + MLT2A2 LTR ERVL 1 453 0 2392 208 252 64 chr10 127822026 127823385 -12493380 + L1MC4a LINE L1 5812 7425 -383 639 163 0 32 chr10 127823444 127823567 -12493198 + MLT1A1 LTR MaLR 194 312 -53 227 157 98 0 chr10 127823577 127823628 -12493137 + L1MC4a LINE L1 7479 7534 -274 * 536 238 102 38 chr10 127823595 127823830 -12492935 + L1MC4 LINE L1 6338 6604 -1221 831 254 38 26 chr10 127823896 127824239 -12492526 + L1MC4 LINE L1 7694 8040 -2 25 0 0 0 chr10 127824487 127824512 -12492253 + AT_rich Low_complexity Low_complexity 1 25 0 4523 143 61 66 chr10 127925129 127926003 -12390762 + MER4D LTR ERV1 4 872 0 1464 244 69 44 chr10 127926670 127927121 -12389644 - MLT1C LTR MaLR 0 467 6 343 207 73 0 chr10 127927213 127927295 -12389470 - MER5A DNA MER1_type -87 102 15 2696 190 40 50 chr10 127928180 127928822 -12387943 + MER92B LTR ERV1 1 636 0 308 277 8 34 chr10 127928963 127929082 -12387683 + MIR3 SINE MIR 9 124 -84 493 100 22 0 chr10 127929257 127929347 -12387418 + (TG)n Simple_repeat Simple_repeat 1 92 0 655 102 16 0 chr10 127930002 127930130 -12386635 + (TA)n Simple_repeat Simple_repeat 1 130 0 276 30 0 0 chr10 127930145 127930178 -12386587 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 269 65 0 109 chr10 127930178 127930224 -12386541 + MLT2A2 LTR ERVL 413 453 0 214 178 0 0 chr10 127930295 127930340 -12386425 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 374 313 264 26 chr10 127930340 127930567 -12386198 - L2 LINE L2 0 3272 2992 2115 145 43 3 chr10 127931459 127931783 -12384982 + MER1B DNA MER1_type 1 337 0 489 182 0 0 chr10 127932706 127932805 -12383960 + CT-rich Low_complexity Low_complexity 1 99 0 2055 117 27 10 chr10 127932805 127933103 -12383662 - AluSx SINE Alu -9 303 1 362 289 105 26 chr10 127933442 127933632 -12383133 + MIR SINE MIR 58 262 0 978 191 67 10 chr10 127934932 127935141 -12381624 - MER106A DNA MER1_type 0 236 16 269 250 277 0 chr10 127935191 127935303 -12381462 - MIR SINE MIR -112 150 8 180 267 120 40 chr10 127935677 127935752 -12381013 - L3 LINE CR1 -56 1521 1441 2027 107 22 4 chr10 127935846 127936154 -12380611 - AluSx SINE Alu 0 319 7 1448 246 41 5 chr10 127936219 127936610 -12380155 - L1ME LINE L1 -491 5671 5267 639 227 42 0 chr10 127936650 127936769 -12379996 + FLAM_C SINE Alu 2 125 -18 550 279 178 5 chr10 127937173 127937381 -12379384 - MIR SINE MIR -1 261 18 188 281 274 16 chr10 127938378 127938481 -12378284 + L2 LINE L2 2818 2893 -420 4082 108 6 9 chr10 127938481 127939010 -12377755 + MER1A DNA MER1_type 1 527 0 188 281 274 16 chr10 127939010 127939209 -12377556 + L2 LINE L2 2893 3198 -115 319 233 82 0 chr10 127939314 127939387 -12377378 + L2 LINE L2 3223 3301 -12 387 0 0 0 chr10 127939908 127939951 -12376814 + (CA)n Simple_repeat Simple_repeat 2 44 0 352 363 80 52 chr10 127940447 127940849 -12375916 - L2 LINE L2 0 3272 2860 192 296 130 37 chr10 127942000 127942108 -12374657 + L2 LINE L2 3155 3272 0 696 261 136 48 chr10 127943035 127943410 -12373355 - L1ME3A LINE L1 -224 5946 5539 180 97 0 0 chr10 127943924 127943955 -12372810 + (A)n Simple_repeat Simple_repeat 1 31 0 266 265 60 24 chr10 127944134 127944217 -12372548 + L2 LINE L2 3186 3271 -1 972 137 9 12 chr10 127944895 127945236 -12371529 + (TA)n Simple_repeat Simple_repeat 2 341 0 1710 172 90 25 chr10 127945259 127945735 -12371030 - MLT2A1 LTR ERVL -40 514 4 198 261 250 11 chr10 127945987 127946075 -12370690 - MIR SINE MIR -64 144 36 198 258 21 103 chr10 127946206 127946303 -12370462 + MIR SINE MIR 42 130 -78 682 281 52 17 chr10 127946401 127946632 -12370133 - MIR SINE MIR 0 262 24 254 243 57 0 chr10 127946629 127946699 -12370066 + MIR SINE MIR 189 262 0 * 2158 16 4 0 chr10 127947451 127947693 -12369072 + AluY SINE Alu 68 310 -1 212 322 81 16 chr10 127947695 127947839 -12368926 + MIR SINE MIR 19 173 -77 267 279 0 35 chr10 127949121 127949207 -12367558 + MIR3 SINE MIR 125 207 -1 549 177 10 0 chr10 127949366 127949462 -12367303 + MLT1C LTR MaLR 1 97 -370 7753 22 0 1 chr10 127949462 127950310 -12366455 + L1PA4 LINE L1 5309 6155 0 27 0 0 0 chr10 127950310 127950337 -12366428 + AT_rich Low_complexity Low_complexity 1 27 0 2269 151 8 35 chr10 127950337 127950443 -12366322 + MLT1C LTR MaLR 81 188 -279 2084 146 0 0 chr10 127950443 127950751 -12366014 + AluSx SINE Alu 1 308 -4 2269 151 8 35 chr10 127950751 127951042 -12365723 + MLT1C LTR MaLR 188 467 0 449 267 57 28 chr10 127951042 127951214 -12365551 - Charlie8 DNA MER1_type -2195 222 46 317 230 0 0 chr10 127951760 127951834 -12364931 - MER58 DNA MER1_type -2227 193 120 1463 274 77 46 chr10 127951931 127952995 -12363770 + L1MEc LINE L1 2103 3150 -3065 586 158 33 42 chr10 127953030 127953150 -12363615 + L1MC3 LINE L1 6587 6705 -1080 2543 95 31 17 chr10 127953153 127953512 -12363253 - THE1B LTR MaLR 0 364 1 586 94 62 31 chr10 127953959 127954055 -12362710 + LTR54 LTR ERV1 1 99 -411 743 217 168 27 chr10 127954065 127954356 -12362409 + MER57A LTR ERV1 107 434 0 2391 114 26 32 chr10 127954661 127955038 -12361727 + THE1C LTR MaLR 1 375 0 231 284 18 9 chr10 127955504 127955613 -12361152 - L1ME LINE L1 -273 5880 5771 379 158 39 0 chr10 127955904 127956031 -12360734 + (TA)n Simple_repeat Simple_repeat 1 132 0 258 32 0 0 chr10 127956026 127956057 -12360708 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 833 301 63 19 chr10 127956074 127956719 -12360046 - L1ME LINE L1 -1217 4912 4230 5010 98 4 15 chr10 127956791 127957476 -12359289 - L1PA13 LINE L1 -2 6161 5484 810 242 36 76 chr10 127957941 127958243 -12358522 + MLT1A1 LTR MaLR 1 290 -75 1622 71 14 0 chr10 127958259 127958469 -12358296 - AluY SINE Alu 0 311 99 452 351 150 3 chr10 127958629 127959008 -12357757 - L1ME LINE L1 -3509 2620 2186 356 358 65 8 chr10 127959294 127959540 -12357225 - HAL1 LINE L1 -738 1769 1510 379 306 16 11 chr10 127959582 127959768 -12356997 - L1ME LINE L1 -5017 1102 916 228 284 15 0 chr10 127960699 127960766 -12355999 + L2 LINE L2 3241 3308 -5 234 242 0 0 chr10 127961253 127961319 -12355446 + A-rich Low_complexity Low_complexity 5 70 0 552 321 0 16 chr10 127961814 127962001 -12354764 - MIR SINE MIR -13 249 66 191 311 87 0 chr10 127962237 127962340 -12354425 + L2 LINE L2 1889 2000 -1314 2327 86 3 10 chr10 127963152 127963453 -12353312 + AluY SINE Alu 1 299 -12 327 211 0 0 chr10 127964505 127964562 -12352203 + MLT1K LTR MaLR 528 584 -4 221 263 121 10 chr10 127964942 127965041 -12351724 - MIR SINE MIR -32 230 121 375 0 55 0 chr10 127965068 127965123 -12351642 + (GA)n Simple_repeat Simple_repeat 1 58 0 2375 91 0 7 chr10 127965656 127965954 -12350811 + AluSg SINE Alu 5 300 -10 280 290 60 45 chr10 127966110 127966154 -12350611 - L1ME4a LINE L1 -232 5889 5847 1705 240 46 29 chr10 127966154 127966608 -12350157 + LTR40b LTR ERVL 1 462 0 280 290 60 45 chr10 127966608 127966763 -12350002 - L1ME4a LINE L1 -274 5847 5687 1728 220 154 19 chr10 127967125 127967612 -12349153 - REP3 LTR ERV -9 553 1 240 258 226 0 chr10 127967853 127967946 -12348819 - MIR SINE MIR -99 163 50 1357 181 138 17 chr10 127968768 127969066 -12347699 - MER2 DNA MER2_type -11 334 1 664 333 24 8 chr10 127970254 127970509 -12346256 + MIR SINE MIR 1 259 -3 2435 58 3 32 chr10 127970579 127970890 -12345875 - AluY SINE Alu -9 302 1 202 234 62 31 chr10 127971400 127971464 -12345301 + L2 LINE L2 3201 3266 -47 249 305 204 6 chr10 127971474 127971641 -12345124 - MIR3 SINE MIR -7 201 2 222 333 11 11 chr10 127972067 127972154 -12344611 + L2 LINE L2 2686 2772 -542 728 250 108 8 chr10 127972605 127972865 -12343900 + Tigger8 DNA MER2_type 92 377 -289 2097 189 20 36 chr10 127973281 127973719 -12343046 - MER57B LTR ERV1 0 434 4 296 286 16 0 chr10 127974140 127974203 -12342562 - MER91 DNA MER1_type -76 64 1 4215 153 16 11 chr10 127974222 127974930 -12341835 + MER50 LTR ERV1 1 711 -23 233 297 156 36 chr10 127974930 127975122 -12341643 - MIR SINE MIR -28 234 20 898 61 0 17 chr10 127975147 127975262 -12341503 - L1PA5 LINE L1 -5 6149 6037 1917 42 17 4 chr10 127975262 127975501 -12341264 + L1P LINE L1 3534 3775 -2371 3492 139 45 4 chr10 127975938 127976164 -12340601 - MER41C LTR ERV1 0 554 339 2073 110 0 7 chr10 127976164 127976483 -12340282 + AluSc SINE Alu 1 317 0 3492 139 45 4 chr10 127976483 127976787 -12339978 - MER41C LTR ERV1 -215 339 1 226 208 0 0 chr10 127976951 127976999 -12339766 + GA-rich Low_complexity Low_complexity 1 48 0 326 246 87 36 chr10 127977015 127977153 -12339612 - MER102b DNA MER1_type -4 337 193 485 267 40 13 chr10 127977983 127978133 -12338632 + LTR16B LTR ERVL 172 325 -139 2175 120 0 0 chr10 127978244 127978536 -12338229 - AluSg SINE Alu -18 292 1 22 0 0 0 chr10 127979210 127979232 -12337533 + AT_rich Low_complexity Low_complexity 1 22 0 267 326 91 0 chr10 127980346 127980478 -12336287 - L3 LINE CR1 -2 1575 1432 315 333 0 0 chr10 127981197 127981293 -12335472 + MIR3 SINE MIR 83 178 -30 22 35 0 0 chr10 127981918 127981947 -12334818 + AT_rich Low_complexity Low_complexity 1 29 0 2238 100 10 7 chr10 127982514 127982813 -12333952 - AluSx SINE Alu -12 300 1 343 260 137 90 chr10 127983205 127983420 -12333345 + MLT1L LTR MaLR 275 604 -11 2292 105 0 7 chr10 127984769 127985074 -12331691 - AluSx SINE Alu -9 303 1 238 282 39 51 chr10 127985121 127985199 -12331566 - MIR SINE MIR -180 82 6 195 42 0 0 chr10 127985570 127985594 -12331171 + (TG)n Simple_repeat Simple_repeat 2 25 0 489 205 0 0 chr10 127986111 127986238 -12330527 + (TG)n Simple_repeat Simple_repeat 2 128 0 2219 175 7 47 chr10 127987072 127987478 -12329287 + MLT1B LTR MaLR 1 390 0 549 322 135 4 chr10 127987700 127987930 -12328835 - MIR SINE MIR 0 262 3 2224 107 21 21 chr10 127988131 127988458 -12328307 + THE1B LTR MaLR 1 327 -37 290 217 66 75 chr10 127989030 127989136 -12327629 + MER5A DNA MER1_type 39 143 -46 250 159 68 0 chr10 127989418 127989462 -12327303 + MER81 DNA DNA 68 114 0 207 88 0 0 chr10 127989676 127989710 -12327055 + (A)n Simple_repeat Simple_repeat 1 34 0 431 218 102 26 chr10 127989965 127990180 -12326585 + L1MC5 LINE L1 7655 7922 -120 2249 98 10 3 chr10 127990260 127990557 -12326208 - AluSc SINE Alu -10 299 1 228 67 0 0 chr10 127990648 127990678 -12326087 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 988 77 7 14 chr10 127990684 127990827 -12325938 - L1PA8A LINE L1 -28 6103 5962 209 341 74 15 chr10 127990951 127991086 -12325679 + MIR3 SINE MIR 20 162 -46 272 247 123 62 chr10 127991497 127991659 -12325106 - MIR SINE MIR -12 250 79 457 284 44 49 chr10 127991713 127991896 -12324869 + MIR SINE MIR 61 242 -20 1744 110 19 8 chr10 127991997 127992260 -12324505 + L1MA4 LINE L1 6029 6294 -6 311 269 101 8 chr10 127992970 127993089 -12323676 - L2 LINE L2 -4 3309 3180 412 230 11 0 chr10 127994401 127994488 -12322277 + MIR SINE MIR 66 153 -109 2668 171 0 0 chr10 127996571 127997004 -12319761 - L1MB7 LINE L1 -18 6166 5734 815 194 140 16 chr10 127997290 127997476 -12319289 + MER63A DNA MER1_type 2 210 0 2279 84 3 3 chr10 127997639 127997926 -12318839 - AluSq SINE Alu -16 297 11 1064 171 117 40 chr10 127998262 127998561 -12318204 + MER33 DNA MER1_type 1 322 -2 568 278 117 0 chr10 127998611 127998816 -12317949 - MIR SINE MIR -11 251 23 1877 242 69 34 chr10 127998922 127999514 -12317251 - L1MC4 LINE L1 -4 8038 7426 2084 227 71 65 chr10 128000331 128000850 -12315915 + L1M4 LINE L1 2227 2741 -3405 4191 159 11 11 chr10 128000850 128001931 -12314834 + SVA Other Other 27 1384 -2 2084 227 71 65 chr10 128001931 128002196 -12314569 + L1M4 LINE L1 2741 3022 -3124 3593 156 53 34 chr10 128002196 128002908 -12313857 + LTR8A LTR ERV1 2 727 0 2084 227 71 65 chr10 128002908 128003137 -12313628 + L1M4 LINE L1 3022 3248 -2898 252 219 137 0 chr10 128003144 128003217 -12313548 - MLT2E LTR ERVL -10 618 536 5227 147 39 11 chr10 128003218 128004084 -12312681 + MER4D LTR ERV1 1 890 -13 584 319 83 44 chr10 128004076 128004461 -12312304 - MLT2F LTR ERVL -72 591 192 * 2004 131 168 20 chr10 128004506 128004858 -12311907 - MER4A LTR ERV1 0 664 261 618 124 21 10 chr10 128004858 128004955 -12311810 - MER4A LTR ERV1 -566 98 1 474 250 18 9 chr10 128004955 128005067 -12311698 - MLT2E LTR ERVL -504 124 12 290 243 0 0 chr10 128005083 128005157 -12311608 + L1M4 LINE L1 3257 3330 -2816 2295 113 0 0 chr10 128005991 128006291 -12310474 + AluSg SINE Alu 1 300 -10 1173 182 19 0 chr10 128007481 128007695 -12309070 + MER20 DNA MER1_type 1 218 -1 2196 124 3 13 chr10 128008031 128008345 -12308420 + AluSx SINE Alu 1 311 -1 185 125 42 0 chr10 128009576 128009624 -12307141 + L2 LINE L2 3016 3065 -207 188 125 0 0 chr10 128009866 128009898 -12306867 - MIR SINE MIR -69 139 108 810 279 47 67 chr10 128010378 128010884 -12305881 + L2 LINE L2 2817 3312 -1 1325 204 108 27 chr10 128010906 128011239 -12305526 + MLT1A1 LTR MaLR 4 363 -2 1177 202 33 19 chr10 128011297 128011687 -12305078 - MLT1D LTR MaLR 0 505 9 4400 113 23 17 chr10 128011974 128012618 -12304147 + MER39B LTR ERV1 1 648 -5 567 287 117 60 chr10 128013177 128013963 -12302802 - L1ME LINE L1 -584 5651 4911 1980 143 29 40 chr10 128013963 128014342 -12302423 + THE1C LTR MaLR 1 375 0 567 287 117 60 chr10 128014342 128015132 -12301633 - L1ME LINE L1 -1324 4911 3996 4605 99 11 0 chr10 128015258 128015895 -12300870 - L1PA13 LINE L1 0 6163 5520 863 161 81 31 chr10 128015917 128016140 -12300625 - Charlie1 DNA MER1_type -2 2759 2526 388 233 60 23 chr10 128016203 128016336 -12300429 - L1ME LINE L1 -4433 1963 1826 561 203 21 8 chr10 128016982 128017094 -12299671 + CT-rich Low_complexity Low_complexity 1 110 -446 2046 135 26 3 chr10 128017094 128017397 -12299368 - AluSx SINE Alu -2 310 1 561 203 21 8 chr10 128017397 128017531 -12299234 + CT-rich Low_complexity Low_complexity 110 556 0 1295 179 49 39 chr10 128017557 128017979 -12298786 + MLT1D LTR MaLR 1 502 -3 1295 129 12 42 chr10 128018325 128018565 -12298200 + L1MB7 LINE L1 5934 6166 -18 2068 137 3 3 chr10 128019918 128020218 -12296547 - AluJo SINE Alu -12 300 1 434 268 0 10 chr10 128020842 128020939 -12295826 + MER81 DNA DNA 15 110 -4 2031 160 39 25 chr10 128020939 128021302 -12295463 + MLT1C LTR MaLR 1 368 -99 2628 58 0 3 chr10 128021713 128022025 -12294740 - AluY SINE Alu 0 311 1 2420 97 3 0 chr10 128023109 128023419 -12293346 - AluSp SINE Alu -2 311 1 366 198 77 11 chr10 128024522 128024613 -12292152 - MER94 DNA DNA -35 99 3 1080 151 8 97 chr10 128024778 128025016 -12291749 - MER20 DNA MER1_type 0 219 3 647 261 50 10 chr10 128025152 128025351 -12291414 + MIR SINE MIR 12 218 -44 494 247 82 6 chr10 128026773 128026931 -12289834 + MIR SINE MIR 64 233 -29 451 257 42 96 chr10 128027526 128027787 -12288978 + MLT1K LTR MaLR 336 582 -6 638 271 116 36 chr10 128028848 128029287 -12287478 - MLT1L LTR MaLR -3 612 139 369 259 37 63 chr10 128029704 128029893 -12286872 - MER5A DNA MER1_type -5 184 1 509 293 57 47 chr10 128029906 128030206 -12286559 - LTR16C LTR ERVL 0 491 189 2136 122 7 0 chr10 128030592 128030886 -12285879 + AluSx SINE Alu 1 296 -16 338 296 51 46 chr10 128031118 128031314 -12285451 - L2 LINE L2 0 3313 3117 1282 141 0 0 chr10 128031419 128031618 -12285147 + L1PBa LINE L1 3 201 -6662 800 127 0 0 chr10 128031619 128031737 -12285028 + L1PBa LINE L1 636 753 -6110 211 365 24 0 chr10 128031803 128031888 -12284877 - L2 LINE L2 -219 3053 2967 807 299 117 6 chr10 128032190 128032524 -12284241 + ERVL LTR ERVL 4183 4553 -1211 498 123 0 12 chr10 128032614 128032695 -12284070 + MER116 DNA Mariner 1 80 0 423 56 0 0 chr10 128032984 128033038 -12283727 + (TG)n Simple_repeat Simple_repeat 2 55 0 336 279 23 31 chr10 128033218 128033347 -12283418 + LTR67 LTR ERVL 430 557 0 2229 132 0 0 chr10 128033402 128033712 -12283053 - AluSx SINE Alu -2 310 1 195 231 90 39 chr10 128034242 128034320 -12282445 - L2 LINE L2 -5 3267 3186 1813 141 7 36 chr10 128034472 128034778 -12281987 - AluJo SINE Alu -15 297 1 336 324 91 17 chr10 128036330 128036571 -12280194 + L1ME4a LINE L1 5634 5892 -229 21 36 0 0 chr10 128036682 128036710 -12280055 + AT_rich Low_complexity Low_complexity 1 28 0 2165 143 42 47 chr10 128036834 128037262 -12279503 - MSTB LTR MaLR 0 426 1 501 290 32 19 chr10 128037890 128038081 -12278684 - MIR SINE MIR -57 205 17 204 308 0 0 chr10 128038188 128038253 -12278512 - MIR SINE MIR -161 101 37 436 292 39 8 chr10 128038787 128038917 -12277848 + MIR SINE MIR 20 153 -55 2512 68 0 0 chr10 128039606 128039913 -12276852 + AluY SINE Alu 4 310 -1 1955 138 17 3 chr10 128040276 128040573 -12276192 + AluSx SINE Alu 1 301 -11 302 312 35 14 chr10 128040629 128040770 -12275995 - MIR SINE MIR -35 227 84 183 259 0 19 chr10 128040868 128040922 -12275843 + MIR SINE MIR 198 250 -12 276 196 0 0 chr10 128041368 128041419 -12275346 + L1MB8 LINE L1 5205 5255 -891 1101 135 12 0 chr10 128041432 128041595 -12275170 + FRAM SINE Alu 12 176 0 4816 186 13 11 chr10 128041602 128042517 -12274248 + L1MB8 LINE L1 5256 6172 -6 315 280 190 35 chr10 128042598 128042798 -12273967 + MIR SINE MIR 14 244 -18 562 279 20 30 chr10 128043729 128043926 -12272839 - MLT1J LTR MaLR -308 203 9 2001 113 62 108 chr10 128044242 128044712 -12272053 + LTR7 LTR ERV1 1 448 -2 16585 91 37 7 chr10 128044714 128047491 -12269274 + HERVH LTR ERV1 1 2987 -4726 926 135 20 0 chr10 128047485 128047633 -12269132 + HERVH LTR ERV1 3140 3290 -4423 * 3446 110 6 2 chr10 128047623 128048123 -12268642 + HERVH LTR ERV1 3492 3993 -3720 4197 149 6 6 chr10 128048125 128048787 -12267978 + HERVH LTR ERV1 4488 5149 -2564 1324 128 43 0 chr10 128048788 128048999 -12267766 + HERVH LTR ERV1 5600 5819 -1894 * 2589 77 45 3 chr10 128048997 128049373 -12267392 + HERVH LTR ERV1 7322 7713 0 1948 120 97 62 chr10 128049373 128049806 -12266959 + LTR7 LTR ERV1 1 448 -2 303 248 120 26 chr10 128050147 128050264 -12266501 + L2 LINE L2 3167 3294 -19 2417 78 0 0 chr10 128052517 128052810 -12263955 - AluY SINE Alu -17 294 2 544 343 184 9 chr10 128052822 128053257 -12263508 - L2 LINE L2 -575 2739 2229 4352 174 63 3 chr10 128053263 128054129 -12262636 - L1MB7 LINE L1 0 6184 5267 829 142 8 0 chr10 128054129 128054256 -12262509 - MER44D DNA MER2_type 0 605 478 2145 170 60 10 chr10 128054259 128054658 -12262107 - MER44D DNA MER2_type -70 535 62 1292 178 52 0 chr10 128054658 128054927 -12261838 - L1MB7 LINE L1 -904 5242 4960 903 242 76 26 chr10 128054927 128055229 -12261536 - L1MB7 LINE L1 -1812 4334 4018 836 268 64 39 chr10 128055298 128055539 -12261226 - L1M4c LINE L1 -4588 1796 1552 2236 125 0 0 chr10 128055539 128055843 -12260922 + AluSx SINE Alu 1 304 -8 836 268 64 39 chr10 128055843 128056018 -12260747 - L1M4c LINE L1 -4832 1552 1383 439 137 25 50 chr10 128056019 128056074 -12260691 + (CATATA)n Simple_repeat Simple_repeat 6 61 -101 2186 211 113 43 chr10 128056074 128056684 -12260081 + MER82 DNA MER2_type 1 653 0 439 137 25 50 chr10 128056684 128056789 -12259976 + (CATATA)n Simple_repeat Simple_repeat 61 162 0 266 246 0 0 chr10 128056941 128057006 -12259759 + (TA)n Simple_repeat Simple_repeat 1 65 0 255 257 167 59 chr10 128057042 128057264 -12259501 - L2 LINE L2 -45 3268 3023 2480 81 0 0 chr10 128058504 128058813 -12257952 - AluY SINE Alu -2 309 1 234 260 0 0 chr10 128058881 128058931 -12257834 - L2 LINE L2 -8 3305 3256 216 0 0 0 chr10 128059201 128059225 -12257540 + (CA)n Simple_repeat Simple_repeat 2 25 0 527 264 116 61 chr10 128060098 128060409 -12256356 - L2 LINE L2 0 3313 2986 2073 103 3 0 chr10 128061375 128061657 -12255108 - AluSg SINE Alu 0 310 28 294 296 84 50 chr10 128062632 128062811 -12253954 + MIR SINE MIR 78 262 0 470 267 67 24 chr10 128063330 128063495 -12253270 - MIR SINE MIR -42 220 49 192 200 0 0 chr10 128063822 128063857 -12252908 - MIR SINE MIR -97 111 77 416 336 131 40 chr10 128066729 128067050 -12249715 + L2 LINE L2 2922 3271 -1 2232 107 0 10 chr10 128067418 128067718 -12249047 + AluSx SINE Alu 1 297 -15 612 249 106 37 chr10 128067749 128067966 -12248799 - MIR SINE MIR -11 251 20 2691 16 0 10 chr10 128068353 128068660 -12248105 - AluY SINE Alu -7 304 1 21 57 0 0 chr10 128068760 128068795 -12247970 + AT_rich Low_complexity Low_complexity 1 35 0 2218 97 0 0 chr10 128069022 128069335 -12247430 - AluSc SINE Alu 0 313 1 227 281 0 0 chr10 128069541 128069598 -12247167 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr10 128071023 128071046 -12245719 + AT_rich Low_complexity Low_complexity 1 23 0 482 305 128 9 chr10 128072399 128072625 -12244140 - MIR SINE MIR -7 255 3 396 115 0 126 chr10 128073393 128073439 -12243326 + MADE1 DNA Mariner 1 33 -47 236 0 67 22 chr10 128073439 128073484 -12243281 + (TTG)n Simple_repeat Simple_repeat 2 48 0 396 115 0 126 chr10 128073484 128073524 -12243241 + MADE1 DNA Mariner 33 76 -4 35 54 0 0 chr10 128073604 128073660 -12243105 + AT_rich Low_complexity Low_complexity 1 56 0 2695 102 8 3 chr10 128073660 128074051 -12242714 - L1PA10 LINE L1 -10 6158 5766 2907 67 0 0 chr10 128074052 128074428 -12242337 - L1PA8 LINE L1 0 6172 5797 2099 131 7 0 chr10 128074762 128075059 -12241706 - AluSx SINE Alu -13 299 1 2364 100 0 3 chr10 128075224 128075534 -12241231 - AluSq SINE Alu -4 309 1 375 259 65 58 chr10 128075965 128076104 -12240661 - MIR SINE MIR -12 250 111 1017 183 12 0 chr10 128076713 128076900 -12239865 + AluSg/x SINE Alu 123 311 0 2077 118 10 0 chr10 128079634 128079922 -12236843 + AluSx SINE Alu 3 293 -19 4436 227 106 47 chr10 128080603 128082431 -12234334 - L1M4 LINE L1 -1450 4696 2760 612 301 56 42 chr10 128083333 128083902 -12232863 + L1M4 LINE L1 4583 5159 -987 306 300 63 29 chr10 128083984 128084285 -12232480 + L1M4 LINE L1 5273 5586 -591 240 86 0 0 chr10 128084540 128084575 -12232190 + (CA)n Simple_repeat Simple_repeat 2 36 0 509 237 101 29 chr10 128086273 128086468 -12230297 - MIR SINE MIR -49 213 8 1258 216 102 3 chr10 128086802 128087085 -12229680 - MLT1F1 LTR MaLR -114 453 143 23 78 0 0 chr10 128087182 128087233 -12229532 + AT_rich Low_complexity Low_complexity 1 51 0 695 274 81 14 chr10 128087438 128087661 -12229104 - MIR SINE MIR -2 260 23 28 29 0 0 chr10 128088244 128088279 -12228486 + AT_rich Low_complexity Low_complexity 1 35 0 2336 73 0 10 chr10 128088491 128088793 -12227972 - AluY SINE Alu -12 299 1 2106 109 0 3 chr10 128089441 128089767 -12226998 - AluSp SINE Alu 0 325 1 23 0 0 0 chr10 128089768 128089791 -12226974 + AT_rich Low_complexity Low_complexity 1 23 0 7686 25 0 0 chr10 128092270 128093504 -12223261 - L1PA4 LINE L1 -3 6152 4919 277 203 0 14 chr10 128094893 128094962 -12221803 + L1MC4a LINE L1 5350 5417 -2391 24 32 0 0 chr10 128094994 128095025 -12221740 + AT_rich Low_complexity Low_complexity 1 31 0 3617 273 118 42 chr10 128095026 128097140 -12219625 + L1MC4a LINE L1 5410 7683 -125 21 36 0 0 chr10 128097143 128097171 -12219594 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 128097207 128097243 -12219522 + AT_rich Low_complexity Low_complexity 1 36 0 1436 172 46 41 chr10 128097268 128097657 -12219108 - Charlie5 DNA MER1_type 0 2624 2234 1664 172 42 31 chr10 128097777 128098137 -12218628 + THE1B LTR MaLR 1 364 0 33 0 0 0 chr10 128098618 128098651 -12218114 + AT_rich Low_complexity Low_complexity 1 33 0 2348 109 0 0 chr10 128098754 128099066 -12217699 + AluSx SINE Alu 1 312 0 1402 109 0 0 chr10 128102610 128102793 -12213972 + AluSg/x SINE Alu 128 310 0 394 157 70 104 chr10 128104210 128104325 -12212440 + MER94 DNA DNA 11 121 -13 180 111 0 0 chr10 128106815 128106842 -12209923 + (TC)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr10 128106849 128106873 -12209892 + AT_rich Low_complexity Low_complexity 1 24 0 1699 179 14 3 chr10 128106898 128107195 -12209570 - AluJo SINE Alu -11 301 2 30 0 0 0 chr10 128107327 128107357 -12209408 + AT_rich Low_complexity Low_complexity 1 30 0 765 80 0 0 chr10 128109221 128109321 -12207444 - LTR12 LTR ERV1 0 714 615 368 232 10 0 chr10 128109323 128109422 -12207343 - LTR30 LTR ERV1 -79 643 544 1431 98 42 67 chr10 128109422 128109707 -12207058 - LTR12 LTR ERV1 -437 1683 52 241 235 0 0 chr10 128109708 128109759 -12207006 - LTR30 LTR ERV1 -671 51 1 897 175 93 71 chr10 128109923 128110204 -12206561 - MLT1A2 LTR MaLR -2 455 83 41827 30 22 1 chr10 128110213 128116237 -12200528 + L1PA3 LINE L1 1 6154 -1 256 246 0 0 chr10 128116245 128116302 -12200463 - MLT1A2 LTR MaLR -286 88 32 1973 115 10 54 chr10 128118090 128118404 -12198361 + AluSx SINE Alu 2 301 -11 705 122 0 0 chr10 128118411 128118509 -12198256 + AluSq SINE Alu 131 228 -85 865 95 26 0 chr10 128118509 128118625 -12198140 + AluSp/q SINE Alu 181 299 -14 18147 25 1 0 chr10 128118626 128121270 -12195495 + L1P1 LINE L1 3152 5796 -359 1715 160 114 2 chr10 128121498 128121892 -12194873 - MLT1D LTR MaLR 0 505 7 1399 122 15 10 chr10 128122646 128122851 -12193914 + AluSq SINE Alu 1 206 -107 216 0 0 0 chr10 128122887 128122911 -12193854 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 411 236 158 24 chr10 128122925 128123090 -12193675 + MIR SINE MIR 32 218 -44 7307 28 0 0 chr10 128123816 128124662 -12192103 + L1PA2 LINE L1 5310 6155 0 1964 106 14 4 chr10 128124763 128125038 -12191727 + AluSc SINE Alu 24 301 -8 2298 79 3 13 chr10 128125079 128125383 -12191382 - AluSc SINE Alu 0 309 9 487 266 75 43 chr10 128125484 128125672 -12191093 + MER58A DNA MER1_type 16 209 -15 4378 133 67 78 chr10 128125924 128126904 -12189861 + pTR5 LTR ERV1 741 1999 -439 357 265 0 0 chr10 128126904 128127002 -12189763 + LTR30 LTR ERV1 517 614 -108 1468 99 4 19 chr10 128127002 128127255 -12189510 + pTR5 LTR ERV1 39 394 -2044 247 188 225 25 chr10 128128242 128128322 -12188443 + MIR SINE MIR 77 172 -90 287 230 345 0 chr10 128130400 128130513 -12186252 + MIR SINE MIR 14 165 -97 543 261 14 0 chr10 128130850 128130992 -12185773 - MER103 DNA DNA -11 155 12 270 136 0 0 chr10 128131022 128131066 -12185699 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 2674 55 0 0 chr10 128131187 128131498 -12185267 - AluY SINE Alu 0 311 1 343 207 24 0 chr10 128131990 128132072 -12184693 - L3 LINE CR1 -89 1488 1405 624 295 109 9 chr10 128132149 128132359 -12184406 + MIR SINE MIR 4 234 -28 240 247 123 0 chr10 128133220 128133301 -12183464 - MIR SINE MIR -72 190 100 392 237 93 0 chr10 128133304 128133401 -12183364 + MER81 DNA DNA 2 107 -7 1288 245 98 19 chr10 128134971 128135400 -12181365 + MLT1C LTR MaLR 1 463 -4 469 264 32 19 chr10 128135997 128136152 -12180613 + MER103 DNA DNA 6 162 -4 2127 191 52 66 chr10 128136692 128137253 -12179512 - MLT2B3 LTR ERVL 0 554 2 2104 109 33 3 chr10 128137444 128137746 -12179019 - AluSx SINE Alu -1 311 1 583 294 70 28 chr10 128137821 128138390 -12178375 - L1MEc LINE L1 -3775 2440 1878 230 263 101 0 chr10 128138483 128138582 -12178183 - L1MEc LINE L1 -4660 1736 1628 314 297 41 0 chr10 128138681 128138836 -12177929 - L1M1 LINE L1 -922 3004 2781 487 0 16 16 chr10 128138857 128138921 -12177844 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1983 134 0 21 chr10 128138930 128139214 -12177551 - AluSg SINE Alu -30 280 3 26 50 0 0 chr10 128139214 128139254 -12177511 + AT_rich Low_complexity Low_complexity 1 40 0 449 305 86 5 chr10 128140168 128140365 -12176400 - Charlie8 DNA MER1_type -2201 216 4 2502 59 0 10 chr10 128140402 128140706 -12176059 - AluY SINE Alu -10 301 1 183 271 24 59 chr10 128140906 128140991 -12175774 + MER5A DNA MER1_type 87 168 -21 * 301 236 11 56 chr10 128140915 128141004 -12175761 - MER5B DNA MER1_type -85 93 9 235 314 129 8 chr10 128141182 128141306 -12175459 + MIR SINE MIR 20 158 -104 318 324 101 42 chr10 128142481 128142719 -12174046 + L1ME4a LINE L1 5535 5786 -335 272 351 54 40 chr10 128142737 128142959 -12173806 + L2 LINE L2 2592 2816 -498 269 340 35 7 chr10 128143054 128143198 -12173567 + L2 LINE L2 2871 3018 -254 190 330 21 41 chr10 128143297 128143394 -12173371 + L2 LINE L2 3198 3292 -21 269 323 30 21 chr10 128143394 128143629 -12173136 + L1ME4a LINE L1 5845 6081 -40 780 154 7 44 chr10 128143645 128143781 -12172984 - FLAM_C SINE Alu -10 133 3 2467 57 3 3 chr10 128144478 128144805 -12171960 + AluY SINE Alu 1 311 0 587 241 106 0 chr10 128144990 128145131 -12171634 - MER5A DNA MER1_type -26 163 8 274 256 64 3 chr10 128145145 128145249 -12171516 + MIR SINE MIR 28 140 -68 553 264 87 69 chr10 128146311 128146393 -12170372 - MER115 DNA AcHobo -10 683 604 2068 104 3 49 chr10 128146393 128146701 -12170064 + AluSx SINE Alu 1 294 -18 553 264 87 69 chr10 128146701 128146952 -12169813 - MER115 DNA AcHobo -89 604 344 254 262 101 101 chr10 128147380 128147529 -12169236 - MER5A DNA MER1_type -35 154 6 208 256 156 98 chr10 128147577 128147936 -12168829 + L2 LINE L2 2934 3313 0 1524 219 44 17 chr10 128149261 128149671 -12167094 + Charlie4a DNA MER1_type 4 424 -84 1058 64 14 14 chr10 128149741 128149882 -12166883 - AluSg/x SINE Alu 0 312 172 244 291 13 13 chr10 128149882 128149961 -12166804 + L2 LINE L2 3235 3313 0 7583 27 40 0 chr10 128150294 128151295 -12165470 - L1PA4 LINE L1 -1 6154 5144 227 298 97 24 chr10 128151859 128151983 -12164782 + MIR SINE MIR 108 240 -22 420 279 196 26 chr10 128154944 128155256 -12161509 + L1ME4a LINE L1 5519 5883 -238 719 213 96 30 chr10 128155972 128156169 -12160596 - MER63A DNA MER1_type 0 210 1 789 224 127 85 chr10 128156174 128156654 -12160111 - MLT1G LTR MaLR -47 520 3 234 252 52 87 chr10 128156938 128157053 -12159712 - MARNA DNA Mariner -458 128 18 383 272 132 10 chr10 128157712 128157893 -12158872 + MLT1J2 LTR MaLR 3 196 -213 1978 241 17 8 chr10 128158134 128158652 -12158113 - L1MCa LINE L1 -2221 4205 3683 1355 180 95 12 chr10 128158652 128159016 -12157749 + MSTB1 LTR MaLR 1 426 0 431 244 89 0 chr10 128159017 128159152 -12157613 - L1MCa LINE L1 -2739 3687 3541 418 84 0 70 chr10 128159153 128159224 -12157541 - L1PA10 LINE L1 -2 6166 6101 1119 137 0 6 chr10 128159242 128159403 -12157362 - FRAM SINE Alu -22 154 1 3914 202 20 26 chr10 128159403 128161041 -12155724 - L1MCa LINE L1 -2856 3570 1943 582 117 0 0 chr10 128161043 128161120 -12155645 + AluSp SINE Alu 43 119 -194 220 314 129 8 chr10 128162021 128162145 -12154620 - MIR SINE MIR -104 158 20 224 330 50 10 chr10 128162323 128162423 -12154342 - MER5B DNA MER1_type -8 170 67 2194 70 0 37 chr10 128162621 128162921 -12153844 + AluY SINE Alu 1 289 -22 5842 194 48 32 chr10 128162950 128165278 -12151487 + L1MC1 LINE L1 3952 6320 -13 294 324 78 0 chr10 128165352 128165494 -12151271 + MIR3 SINE MIR 52 204 -4 350 335 84 19 chr10 128167001 128167156 -12149609 + MIR3 SINE MIR 39 203 -5 280 326 56 0 chr10 128167144 128167233 -12149532 + L2 LINE L2 3179 3272 0 * 216 67 0 0 chr10 128167424 128167454 -12149311 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 590 214 125 109 chr10 128168104 128168609 -12148156 - HAL1 LINE L1 -1156 1351 839 3169 256 57 60 chr10 128168790 128170061 -12146704 - HAL1 LINE L1 -4 2503 1237 395 328 115 16 chr10 128170272 128170516 -12146249 - L2 LINE L2 -19 3253 2986 2408 122 34 3 chr10 128170835 128171187 -12145578 - L1PB4 LINE L1 -5 6151 5789 7793 225 36 35 chr10 128171190 128172138 -12144627 - L1PBb LINE L1 -2107 4096 3150 185 0 0 39 chr10 128172138 128172164 -12144601 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7793 225 36 35 chr10 128172164 128174824 -12141941 - L1PBb LINE L1 -3053 3150 424 1958 159 175 79 chr10 128174834 128175418 -12141347 - MER63C DNA MER1_type -40 890 251 274 169 31 0 chr10 128175570 128175635 -12141130 - MER63C DNA MER1_type -757 173 107 886 117 0 0 chr10 128175636 128175756 -12141009 - AluSx SINE Alu -4 308 189 1096 112 0 0 chr10 128175756 128175899 -12140866 - AluSx SINE Alu -169 143 1 233 269 39 0 chr10 128175903 128175981 -12140784 - MER63C DNA MER1_type -825 105 25 370 318 43 8 chr10 128176746 128176961 -12139804 - MIR SINE MIR -27 235 13 1319 204 32 7 chr10 128178981 128179266 -12137499 + L1MCa LINE L1 7 298 -6128 1380 136 17 17 chr10 128179266 128179502 -12137263 + L1MCa LINE L1 1694 1929 -4497 1439 109 5 10 chr10 128179502 128179703 -12137062 - AluSp SINE Alu -1 312 113 254 288 0 0 chr10 128179843 128179909 -12136856 + MLT1I LTR MaLR 344 409 0 315 0 0 0 chr10 128180260 128180295 -12136470 + (TG)n Simple_repeat Simple_repeat 2 36 0 2146 133 3 3 chr10 128180519 128180819 -12135946 + AluSx SINE Alu 1 300 -12 493 257 104 7 chr10 128180835 128180979 -12135786 + MIR SINE MIR 44 201 -61 1738 182 75 22 chr10 128181025 128181380 -12135385 - MLT1A2 LTR MaLR 0 457 1 905 286 113 24 chr10 128181380 128181795 -12134970 - MLT1J LTR MaLR -51 460 9 204 308 0 0 chr10 128181795 128181847 -12134918 + MIR SINE MIR 209 260 -2 2412 97 3 0 chr10 128182591 128182900 -12133865 - AluSq SINE Alu -3 310 1 1904 167 68 102 chr10 128182932 128183320 -12133445 + Charlie1b DNA MER1_type 1 367 -2394 2415 75 3 0 chr10 128183320 128183614 -12133151 - AluSp SINE Alu -18 295 1 1904 167 68 102 chr10 128183614 128183765 -12133000 + Charlie1b DNA MER1_type 367 522 -1 989 216 17 39 chr10 128183883 128184114 -12132651 - MER58B DNA MER1_type -1 340 115 228 160 0 40 chr10 128184445 128184495 -12132270 - L2 LINE L2 -3 3310 3263 2367 218 3 4 chr10 128184646 128185239 -12131526 + MER82 DNA MER2_type 7 652 -1 279 216 88 131 chr10 128185407 128185758 -12131007 + L1ME4a LINE L1 5781 6116 -5 305 319 18 0 chr10 128186594 128186707 -12130058 + MIR SINE MIR 31 145 -63 213 234 21 0 chr10 128188916 128188963 -12127802 - L2 LINE L2 -9 3263 3216 535 146 10 19 chr10 128189580 128189683 -12127082 + MER5A DNA MER1_type 4 105 -84 477 0 0 0 chr10 128190223 128190276 -12126489 + (TG)n Simple_repeat Simple_repeat 2 54 0 626 275 0 17 chr10 128190601 128190779 -12125986 + MER5B DNA MER1_type 1 175 -3 1819 178 164 5 chr10 128191120 128191546 -12125219 - MLT1D LTR MaLR 0 505 12 222 234 16 31 chr10 128191557 128191621 -12125144 - MIR SINE MIR -80 182 120 260 276 184 0 chr10 128191993 128192091 -12124674 + L2 LINE L2 3198 3313 0 659 268 62 62 chr10 128192238 128192578 -12124187 + MLT1I LTR MaLR 70 409 0 366 276 11 0 chr10 128192630 128192717 -12124048 + MIR SINE MIR 43 130 -78 1780 177 113 93 chr10 128193108 128193604 -12123161 + L1MB7 LINE L1 5661 6166 -18 21 0 0 0 chr10 128193836 128193857 -12122908 + AT_rich Low_complexity Low_complexity 1 21 0 2235 122 0 0 chr10 128193859 128194153 -12122612 + AluSx SINE Alu 1 294 -18 217 152 0 65 chr10 128195762 128195808 -12120957 + CT-rich Low_complexity Low_complexity 2 44 0 387 314 35 17 chr10 128195944 128196116 -12120649 + MER5A DNA MER1_type 15 189 0 4566 169 18 10 chr10 128196201 128197018 -12119747 - L1MB8 LINE L1 -6 6172 5349 296 267 237 0 chr10 128197026 128197157 -12119608 + MIR SINE MIR 91 252 -10 1527 285 84 26 chr10 128197177 128197784 -12118981 + MLT2F LTR ERVL 10 651 -12 2221 198 85 13 chr10 128197956 128198427 -12118338 - MLT1D LTR MaLR 0 505 1 583 264 27 7 chr10 128198428 128198576 -12118189 + LTR33 LTR ERVL 26 176 -345 581 197 82 7 chr10 128198651 128198798 -12117967 + LTR33 LTR ERVL 294 451 -70 2492 168 48 7 chr10 128198806 128199460 -12117305 + L1M4 LINE L1 5009 5700 -474 234 396 108 22 chr10 128200460 128200599 -12116166 - L2 LINE L2 -1 3271 3121 215 321 60 30 chr10 128200819 128200987 -12115778 + L2 LINE L2 2886 3058 -214 2495 74 0 0 chr10 128201178 128201476 -12115289 + AluSc SINE Alu 1 298 -11 426 350 107 0 chr10 128203268 128203445 -12113320 + MIR SINE MIR 67 262 0 27 0 0 0 chr10 128203922 128203949 -12112816 + GC_rich Low_complexity Low_complexity 1 27 0 290 326 99 11 chr10 128204811 128204992 -12111773 - MER113 DNA MER1_type? -89 432 236 644 231 44 108 chr10 128205090 128205406 -12111359 - L1ME3A LINE L1 -68 6102 5807 254 209 0 15 chr10 128205410 128205477 -12111288 - MER113 DNA MER1_type? -296 225 160 481 299 30 24 chr10 128206408 128206575 -12110190 + MIR SINE MIR 47 214 -48 481 262 19 0 chr10 128207095 128207202 -12109563 - MER81 DNA DNA -5 109 1 306 0 0 0 chr10 128207341 128207375 -12109390 + (TTA)n Simple_repeat Simple_repeat 2 35 0 806 198 64 5 chr10 128207375 128207564 -12109201 + MER110 LTR ERV1 9 249 -242 201 197 73 4 chr10 128207725 128207779 -12108986 - MIR SINE MIR -61 147 97 1778 227 29 23 chr10 128207820 128208117 -12108648 + MER74A LTR ERVL 76 379 -179 189 0 0 0 chr10 128208117 128208138 -12108627 + (CCCCCT)n Simple_repeat Simple_repeat 5 25 0 1778 227 29 23 chr10 128208138 128208320 -12108445 + MER74A LTR ERVL 379 558 0 2326 106 77 6 chr10 128208691 128209031 -12107734 - THE1B LTR MaLR 0 364 1 2016 183 0 51 chr10 128209032 128209425 -12107340 - MLT1B LTR MaLR -17 373 1 23 33 0 0 chr10 128209764 128209794 -12106971 + AT_rich Low_complexity Low_complexity 1 30 0 391 197 66 0 chr10 128210069 128210145 -12106620 + MLT1A2 LTR MaLR 3 83 -291 1075 99 128 0 chr10 128210145 128210317 -12106448 - AluSq SINE Alu -9 304 111 254 296 24 32 chr10 128211432 128211557 -12105208 - L1M4c LINE L1 -5033 1351 1228 2354 136 27 11 chr10 128211890 128212258 -12104507 - THE1C LTR MaLR 0 375 2 1711 143 11 0 chr10 128212271 128212537 -12104228 + AluSx SINE Alu 28 296 -16 932 211 14 24 chr10 128212551 128212759 -12104006 + MLT1A2 LTR MaLR 169 374 0 216 354 57 6 chr10 128213212 128213387 -12103378 - L2 LINE L2 -574 2740 2557 1812 212 39 68 chr10 128213437 128213495 -12103270 - MLT1D LTR MaLR -6 499 441 1647 124 0 124 chr10 128213495 128213851 -12102914 + AluSx SINE Alu 1 312 0 1812 212 39 68 chr10 128213851 128214306 -12102459 - MLT1D LTR MaLR -64 441 1 2632 173 41 12 chr10 128214834 128215356 -12101409 + LTR27 LTR ERV1 3 552 -17 1776 225 94 25 chr10 128215460 128216080 -12100685 + LTR27-int LTR ERV1 109 568 -2520 4339 164 33 31 chr10 128216197 128217856 -12098909 + LTR27-int LTR ERV1 601 4912 -305 1084 136 152 5 chr10 128217856 128218054 -12098711 + AluSg1 SINE Alu 1 227 -82 16540 155 32 28 chr10 128218056 128219345 -12097420 + LTR27-int LTR ERV1 1210 2492 -4504 2648 14 0 0 chr10 128219345 128219641 -12097124 + AluYa5 SINE Alu 9 304 -7 16540 155 32 28 chr10 128219641 128221854 -12094911 + LTR27-int LTR ERV1 2492 6996 0 2677 164 23 17 chr10 128221855 128222370 -12094395 + LTR27 LTR ERV1 3 488 -13 348 266 142 75 chr10 128223075 128223342 -12093423 - L2 LINE L2 -52 3220 2936 378 42 0 0 chr10 128223487 128223535 -12093230 + (TG)n Simple_repeat Simple_repeat 1 48 0 474 275 14 28 chr10 128223709 128223851 -12092914 + MIR SINE MIR 123 262 0 415 299 65 33 chr10 128224443 128224627 -12092138 + MIR SINE MIR 2 191 -71 415 333 43 19 chr10 128227386 128227619 -12089146 - MIR SINE MIR -19 243 1 458 289 8 8 chr10 128228118 128228246 -12088519 - MER5A DNA MER1_type -61 128 1 347 362 81 9 chr10 128228359 128228569 -12088196 - MIR SINE MIR -6 256 32 203 289 0 0 chr10 128228633 128228685 -12088080 + L2 LINE L2 3261 3312 -1 413 228 63 31 chr10 128228949 128229076 -12087689 - L2 LINE L2 0 3313 3183 2273 128 34 3 chr10 128229533 128229891 -12086874 - L1PB4 LINE L1 -5 6151 5783 7567 224 37 35 chr10 128229891 128230832 -12085933 - L1PBb LINE L1 -2110 4093 3155 185 0 0 39 chr10 128230832 128230858 -12085907 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7567 224 37 35 chr10 128230858 128233521 -12083244 - L1PBb LINE L1 -3048 3155 424 1796 183 150 58 chr10 128233531 128234117 -12082648 - MER63C DNA MER1_type -40 890 251 253 148 33 0 chr10 128234273 128234334 -12082431 - MER63C DNA MER1_type -761 169 107 826 125 0 0 chr10 128234335 128234455 -12082310 - AluSx SINE Alu -4 308 189 1044 112 0 0 chr10 128234455 128234598 -12082167 - AluSx SINE Alu -170 143 1 406 318 43 8 chr10 128235445 128235660 -12081105 - MIR SINE MIR -27 235 13 236 289 53 38 chr10 128236454 128236717 -12080048 - L1M4 LINE L1 -1751 4395 4129 691 318 139 48 chr10 128236733 128237116 -12079649 - L1M4 LINE L1 -2349 3797 3450 4425 25 8 0 chr10 128237116 128237629 -12079136 - L1PA4 LINE L1 -1 6154 5638 691 318 139 48 chr10 128237629 128238044 -12078721 - L1M4 LINE L1 -2696 3450 2926 399 83 17 0 chr10 128238385 128238445 -12078320 + THE1B-int LTR MaLR 1519 1579 -1 2332 132 22 25 chr10 128238445 128238810 -12077955 + THE1B LTR MaLR 1 364 0 1296 198 45 7 chr10 128238812 128239100 -12077665 - L1PA15-16 LINE L1 -4966 1883 1585 205 355 0 19 chr10 128239304 128239411 -12077354 + CT-rich Low_complexity Low_complexity 4 108 0 210 200 22 0 chr10 128240014 128240059 -12076706 + L2 LINE L2 3268 3313 0 455 257 37 73 chr10 128240330 128240602 -12076163 + MLT1G1 LTR MaLR 14 275 -320 385 185 0 0 chr10 128241090 128241171 -12075594 + L1MA8 LINE L1 6190 6270 -21 24 32 0 0 chr10 128241220 128241251 -12075514 + AT_rich Low_complexity Low_complexity 1 31 0 806 193 46 61 chr10 128241258 128241455 -12075310 + MER119 DNA MER1_type 389 582 -1 227 214 194 10 chr10 128241502 128241600 -12075165 - MLT1L LTR MaLR -485 130 15 1325 195 126 15 chr10 128241606 128241940 -12074825 + MSTA LTR MaLR 1 371 -57 235 226 16 73 chr10 128241941 128242065 -12074700 + AluS SINE Alu 1 94 -208 223 294 12 12 chr10 128242418 128242503 -12074262 - L3 LINE CR1 -418 1159 1075 466 246 175 6 chr10 128243083 128243254 -12073511 + MIR SINE MIR 46 245 -17 860 191 64 6 chr10 128244406 128244579 -12072186 + MER5A DNA MER1_type 2 184 -5 1040 252 72 56 chr10 128244750 128245055 -12071710 + L1ME4a LINE L1 5402 5701 -420 1552 168 71 0 chr10 128245055 128245364 -12071401 - L1MC2 LINE L1 -9 6335 6005 1040 252 72 56 chr10 128245364 128245580 -12071185 + L1ME4a LINE L1 5701 5936 -185 2186 71 4 0 chr10 128245580 128245892 -12070873 - AluY SINE Alu 0 313 1 1040 252 72 56 chr10 128245892 128245939 -12070826 + L1ME4a LINE L1 5936 5981 -140 425 121 169 12 chr10 128245940 128246023 -12070742 + AluSg1 SINE Alu 2 97 -212 181 74 37 0 chr10 128246571 128246598 -12070167 - L2 LINE L2 -90 3182 3155 971 274 95 32 chr10 128246947 128247348 -12069417 - MLT1K LTR MaLR -8 580 155 6067 185 33 22 chr10 128248777 128248827 -12067938 + L1MB7 LINE L1 3954 4002 -2182 2051 173 40 3 chr10 128248827 128249179 -12067586 + MLT1A1 LTR MaLR 1 365 0 6067 185 33 22 chr10 128249179 128251325 -12065440 + L1MB7 LINE L1 4002 6174 -10 2060 126 7 0 chr10 128251462 128251755 -12065010 + AluSx SINE Alu 3 297 -15 1309 170 18 123 chr10 128251903 128252303 -12064462 - MLT1D LTR MaLR -138 367 10 614 309 45 5 chr10 128253552 128253753 -12063012 - MIR SINE MIR -33 229 21 737 275 32 5 chr10 128254010 128254228 -12062537 - HERV16 LTR ERVL -2929 2067 1844 1884 310 60 38 chr10 128254348 128255679 -12061086 - HERV16 LTR ERVL -3461 1535 147 882 278 78 22 chr10 128255803 128256174 -12060591 - LTR16A LTR ERVL -47 403 12 617 238 72 72 chr10 128256223 128256323 -12060442 - L1MEc LINE L1 -4305 2091 1992 2141 105 0 21 chr10 128256323 128256648 -12060117 - AluY SINE Alu 0 319 1 617 238 72 72 chr10 128256648 128256865 -12059900 - L1MEc LINE L1 -4403 1993 1773 183 382 38 38 chr10 128257632 128257763 -12059002 + MIR SINE MIR 18 148 -60 2349 119 0 0 chr10 128257847 128258158 -12058607 + AluSx SINE Alu 1 311 -1 2434 99 0 0 chr10 128260133 128260445 -12056320 + AluSx SINE Alu 1 312 0 2138 223 84 71 chr10 128261874 128262631 -12054134 + LTR41 LTR ERVL 1 767 -6 1747 159 19 99 chr10 128262790 128263206 -12053559 - MLT1B LTR MaLR -4 386 4 199 340 113 0 chr10 128263287 128263393 -12053372 + MIR SINE MIR 29 146 -62 646 269 70 5 chr10 128264020 128264221 -12052544 - MIR SINE MIR -13 249 36 355 340 47 11 chr10 128265477 128265668 -12051097 - L2 LINE L2 -253 3060 2863 23 0 0 0 chr10 128266776 128266799 -12049966 + AT_rich Low_complexity Low_complexity 1 23 0 346 278 99 31 chr10 128267962 128268124 -12048641 - MIR SINE MIR -2 260 88 2113 166 83 64 chr10 128268565 128268956 -12047809 + MLT2B1 LTR ERVL 1 383 -137 2210 114 44 33 chr10 128268956 128269316 -12047449 - THE1B LTR MaLR 0 364 1 2113 166 83 64 chr10 128269316 128269379 -12047386 + MLT2B1 LTR ERVL 383 467 -53 288 53 0 0 chr10 128269379 128269417 -12047348 + (CA)n Simple_repeat Simple_repeat 2 39 0 2113 166 83 64 chr10 128269417 128269432 -12047333 + MLT2B1 LTR ERVL 467 480 -40 274 168 42 11 chr10 128269441 128269536 -12047229 + (TATG)n Simple_repeat Simple_repeat 2 99 0 300 124 86 0 chr10 128269611 128269716 -12047049 + (TA)n Simple_repeat Simple_repeat 1 114 0 230 347 63 0 chr10 128269944 128270039 -12046726 - MIR SINE MIR -114 148 48 447 191 0 22 chr10 128270406 128270542 -12046223 + (TA)n Simple_repeat Simple_repeat 1 133 0 315 203 17 0 chr10 128270588 128270647 -12046118 - MLT2B1 LTR ERVL -158 362 303 25 31 0 0 chr10 128271056 128271088 -12045677 + AT_rich Low_complexity Low_complexity 1 32 0 531 208 112 22 chr10 128271095 128271273 -12045492 + L1MD3 LINE L1 7789 7982 -13 1014 200 13 44 chr10 128271542 128271767 -12044998 - MER20 DNA MER1_type -1 218 1 2297 99 6 22 chr10 128271816 128272130 -12044635 + AluSg SINE Alu 1 309 -1 2153 122 3 0 chr10 128272231 128272525 -12044240 - AluSg SINE Alu -14 296 2 929 228 59 8 chr10 128273991 128274228 -12042537 - MIR SINE MIR 0 262 14 393 288 120 21 chr10 128274518 128274751 -12042014 + MLT1H LTR MaLR 37 292 -257 277 318 95 16 chr10 128274811 128274937 -12041828 + MLT1H LTR MaLR 401 536 -13 291 249 146 82 chr10 128275626 128275859 -12040906 + L1MC4a LINE L1 5401 5648 -2160 42 48 0 0 chr10 128275859 128275922 -12040843 + AT_rich Low_complexity Low_complexity 1 63 0 609 293 102 11 chr10 128275931 128276197 -12040568 + L1MC4a LINE L1 5634 5923 -1885 27 0 0 0 chr10 128276411 128276438 -12040327 + AT_rich Low_complexity Low_complexity 1 27 0 186 323 0 0 chr10 128276677 128276739 -12040026 - L2 LINE L2 -8 3264 3203 288 0 0 0 chr10 128276896 128276928 -12039837 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 387 304 101 7 chr10 128277144 128277292 -12039473 + MIR SINE MIR 20 181 -81 182 224 138 17 chr10 128277326 128277384 -12039381 - L2 LINE L2 -20 3252 3188 206 345 172 0 chr10 128278445 128278561 -12038204 + L2 LINE L2 2917 3052 -220 900 146 15 0 chr10 128278685 128278815 -12037950 + Tigger7 DNA MER2_type 2 133 -600 1803 107 0 0 chr10 128278815 128279049 -12037716 - AluSq SINE Alu -79 234 1 1336 170 97 21 chr10 128279052 128279340 -12037425 + Tigger7 DNA MER2_type 2270 2579 -8 227 254 0 17 chr10 128279376 128279435 -12037330 + L2 LINE L2 3255 3312 -1 335 306 37 8 chr10 128280575 128280709 -12036056 + MIR SINE MIR 46 183 -79 5981 121 116 117 chr10 128280731 128282603 -12034162 + pTR5 LTR ERV1 375 2438 0 574 302 71 51 chr10 128283720 128284015 -12032750 + MLT1K LTR MaLR 45 345 -243 370 285 28 26 chr10 128285233 128285405 -12031360 - L1MC5 LINE L1 -89 7953 7662 710 270 42 38 chr10 128286133 128286422 -12030343 + L1ME4a LINE L1 5608 5897 -224 21 0 0 31 chr10 128286602 128286613 -12030152 + AT_rich Low_complexity Low_complexity 1 11 -20 1644 195 13 31 chr10 128286613 128286931 -12029834 - AluJo SINE Alu 0 312 1 21 0 0 31 chr10 128286931 128286951 -12029814 + AT_rich Low_complexity Low_complexity 11 31 0 216 254 0 18 chr10 128286972 128287027 -12029738 + GA-rich Low_complexity Low_complexity 4 57 0 188 132 0 26 chr10 128287034 128287072 -12029693 + (GAAAA)n Simple_repeat Simple_repeat 5 41 0 865 10 0 0 chr10 128287300 128287397 -12029368 + L1PA2 LINE L1 6055 6151 -4 870 277 56 62 chr10 128288247 128288519 -12028246 - L2 LINE L2 -3 3310 3038 2183 121 0 3 chr10 128288519 128288817 -12027948 - AluSx SINE Alu -15 297 1 870 277 56 62 chr10 128288817 128288951 -12027814 - L2 LINE L2 -275 3038 2905 561 244 83 61 chr10 128288951 128289180 -12027585 - MER106A DNA MER1_type 0 236 3 870 277 56 62 chr10 128289180 128289315 -12027450 - L2 LINE L2 -408 2905 2763 287 229 0 12 chr10 128289460 128289543 -12027222 + CT-rich Low_complexity Low_complexity 1 82 0 216 135 0 0 chr10 128291628 128291665 -12025100 + (CACTA)n Simple_repeat Simple_repeat 5 41 0 336 287 0 41 chr10 128294537 128294659 -12022106 - MIR3 SINE MIR -27 181 65 406 254 188 11 chr10 128294677 128294858 -12021907 + MIR SINE MIR 41 253 -9 316 292 62 15 chr10 128294962 128295092 -12021673 + MIR SINE MIR 48 183 -79 460 267 44 47 chr10 128296458 128296713 -12020052 - MIR SINE MIR 0 262 3 247 296 0 20 chr10 128297179 128297277 -12019488 + MIR SINE MIR 64 159 -103 222 150 0 0 chr10 128297841 128297881 -12018884 + (CA)n Simple_repeat Simple_repeat 1 40 0 225 256 12 47 chr10 128298789 128298875 -12017890 + MIR SINE MIR 48 130 -132 189 200 89 89 chr10 128299114 128299204 -12017561 - MIR SINE MIR -70 192 103 487 322 34 10 chr10 128299556 128299761 -12017004 + MIR SINE MIR 35 244 -18 577 242 6 42 chr10 128299911 128300076 -12016689 - MIR SINE MIR -25 237 79 839 206 7 5 chr10 128301430 128301854 -12014911 + (CA)n Simple_repeat Simple_repeat 1 425 0 440 306 91 19 chr10 128302226 128302435 -12014330 + L2 LINE L2 3088 3311 -2 234 321 62 27 chr10 128302589 128302701 -12014064 + MIR SINE MIR 128 243 -19 35 0 0 0 chr10 128302927 128302962 -12013803 + AT_rich Low_complexity Low_complexity 1 35 0 2458 88 0 0 chr10 128304134 128304441 -12012324 + AluSc SINE Alu 1 307 -2 289 248 29 38 chr10 128304579 128304684 -12012081 + MER5A DNA MER1_type 80 183 -6 1685 117 132 0 chr10 128304821 128305078 -12011687 + AluSg SINE Alu 1 291 -9 220 386 0 0 chr10 128305338 128305426 -12011339 + MER5A DNA MER1_type 1 88 -101 386 242 10 0 chr10 128305968 128306067 -12010698 - MIR SINE MIR -13 249 150 346 267 109 24 chr10 128306069 128306234 -12010531 - MIR SINE MIR -34 228 50 756 239 158 81 chr10 128307163 128307594 -12009171 - MLT1H LTR MaLR -13 536 73 201 39 0 0 chr10 128308232 128308258 -12008507 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 939 43 0 17 chr10 128308272 128308389 -12008376 - L1PA8 LINE L1 -7 6165 6051 702 69 0 0 chr10 128308390 128308477 -12008288 - L1P3 LINE L1 -361 5811 5725 252 335 61 30 chr10 128308912 128309109 -12007656 - MLT1H-int LTR MaLR -1249 486 284 21 36 0 0 chr10 128309212 128309240 -12007525 + AT_rich Low_complexity Low_complexity 1 28 0 280 345 63 0 chr10 128309565 128309707 -12007058 - L2 LINE L2 -583 2731 2581 1959 208 13 74 chr10 128309802 128310354 -12006411 + MLT2B1 LTR ERVL 1 518 -2 232 173 0 39 chr10 128310370 128310422 -12006343 - MLT1H LTR MaLR -8 587 538 845 202 56 30 chr10 128310423 128310621 -12006144 - MER58A DNA MER1_type -3 221 19 1002 246 94 41 chr10 128310623 128311017 -12005748 - MLT1H LTR MaLR -46 503 89 22 35 0 0 chr10 128311556 128311585 -12005180 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 128311758 128311803 -12004962 + AT_rich Low_complexity Low_complexity 1 45 0 595 303 34 17 chr10 128312523 128312761 -12004004 - MIR SINE MIR 0 262 21 245 169 34 11 chr10 128314094 128314183 -12002582 + (TA)n Simple_repeat Simple_repeat 2 92 0 729 283 132 5 chr10 128315229 128315448 -12001317 - MLT1I LTR MaLR -156 253 7 21 57 0 0 chr10 128316096 128316131 -12000634 + AT_rich Low_complexity Low_complexity 1 35 0 473 272 63 6 chr10 128316537 128316695 -12000070 + MIR SINE MIR 79 245 -17 190 306 14 14 chr10 128316881 128316953 -11999812 + MIR SINE MIR 57 128 -80 2327 103 0 6 chr10 128317026 128317337 -11999428 + AluSc SINE Alu 1 309 0 198 260 156 0 chr10 128317538 128317615 -11999150 + L2 LINE L2 3174 3262 -10 209 347 61 56 chr10 128317801 128318014 -11998751 + MIR SINE MIR 10 223 -39 272 27 27 0 chr10 128318912 128318949 -11997816 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2302 105 3 3 chr10 128320064 128320370 -11996395 - AluY SINE Alu -5 306 1 22 80 0 0 chr10 128321016 128321066 -11995699 + AT_rich Low_complexity Low_complexity 1 50 0 1390 232 104 44 chr10 128321517 128321930 -11994835 + MLT2B1 LTR ERVL 1 438 -82 1225 136 109 122 chr10 128321913 128322207 -11994558 - MER7A DNA MER2_type -57 289 2 * 253 65 0 0 chr10 128322232 128322278 -11994487 + LTR66 LTR ERVL 394 439 -171 279 136 0 68 chr10 128322279 128322338 -11994427 + MLT2B1 LTR ERVL 464 518 -2 953 302 68 16 chr10 128322372 128322683 -11994082 - MLT1K LTR MaLR -248 340 14 264 270 120 10 chr10 128324540 128324640 -11992125 - L2 LINE L2 0 3313 3203 207 0 0 0 chr10 128326138 128326161 -11990604 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr10 128326370 128326403 -11990362 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 128328294 128328324 -11988441 + AT_rich Low_complexity Low_complexity 1 30 0 1026 278 112 39 chr10 128328590 128329127 -11987638 + MLT1K LTR MaLR 11 586 -2 698 287 45 82 chr10 128329473 128330008 -11986757 + L1ME LINE L1 6 544 -5526 481 282 30 23 chr10 128330114 128330389 -11986376 + L1ME LINE L1 521 746 -5324 6311 101 11 8 chr10 128330390 128331433 -11985332 + L1PA15 LINE L1 5122 6165 0 1506 161 109 13 chr10 128331472 128331783 -11984982 - MER2 DNA MER2_type -2 342 2 225 343 36 14 chr10 128331969 128332109 -11984656 - MIR3 SINE MIR -43 165 23 23 0 0 0 chr10 128332696 128332719 -11984046 + AT_rich Low_complexity Low_complexity 1 23 0 636 251 56 10 chr10 128333284 128333479 -11983286 - MIR SINE MIR -24 238 35 223 323 21 11 chr10 128333863 128333956 -11982809 + MIR3 SINE MIR 112 205 -3 503 316 127 39 chr10 128334002 128334442 -11982323 + L1MC4a LINE L1 5443 5921 -1887 217 255 38 0 chr10 128334790 128334896 -11981869 + (CATATA)n Simple_repeat Simple_repeat 1 110 0 277 299 93 25 chr10 128336493 128336697 -11980068 - L2 LINE L2 -217 3055 2838 282 333 44 22 chr10 128336771 128336906 -11979859 - MIR SINE MIR -113 149 12 256 231 0 15 chr10 128337457 128337522 -11979243 - L2 LINE L2 0 3313 3250 477 297 151 20 chr10 128337523 128337920 -11978845 + L1M4 LINE L1 4131 4579 -1567 21 0 0 0 chr10 128337984 128338005 -11978760 + AT_rich Low_complexity Low_complexity 1 21 0 224 247 26 0 chr10 128338108 128338262 -11978503 + (TA)n Simple_repeat Simple_repeat 2 159 0 249 274 96 30 chr10 128338639 128338774 -11977991 + L1P LINE L1 5286 5429 -725 379 191 19 20 chr10 128338784 128338885 -11977880 - MLT1D LTR MaLR 0 530 449 299 233 85 78 chr10 128338886 128339069 -11977696 + L1ME4a LINE L1 5849 6036 -85 2415 89 3 0 chr10 128339069 128339372 -11977393 - AluSc SINE Alu -5 304 1 299 233 85 78 chr10 128339372 128339459 -11977306 + L1ME4a LINE L1 6036 6121 0 206 308 0 0 chr10 128340600 128340652 -11976113 + L2 LINE L2 3205 3256 -16 186 143 0 0 chr10 128341724 128341759 -11975006 + (CA)n Simple_repeat Simple_repeat 1 35 0 1106 192 5 27 chr10 128341783 128342007 -11974758 - MER20 DNA MER1_type 0 219 1 236 324 138 21 chr10 128342537 128342682 -11974083 + L2 LINE L2 3075 3236 -36 425 280 57 31 chr10 128342692 128342885 -11973880 - MIR SINE MIR 0 262 65 516 270 74 16 chr10 128343824 128344013 -11972752 - LTR16C LTR ERVL -5 486 287 648 207 7 43 chr10 128344021 128344161 -11972604 - MER63A DNA MER1_type -25 185 51 235 269 60 60 chr10 128344236 128344403 -11972362 - LTR16C LTR ERVL -222 269 103 399 333 48 9 chr10 128346249 128346480 -11970285 - LTR16C LTR ERVL -248 243 4 311 233 129 52 chr10 128348308 128348501 -11968264 + MLT1K LTR MaLR 378 585 -3 493 325 28 49 chr10 128348663 128348989 -11967776 + L2 LINE L2 2435 2753 -561 1301 221 91 23 chr10 128349087 128349481 -11967284 - MLT1D LTR MaLR -64 441 21 318 340 127 21 chr10 128349499 128349790 -11966975 + L2 LINE L2 2914 3235 -78 574 211 106 84 chr10 128353605 128353832 -11962933 + MIR SINE MIR 26 257 -5 939 234 88 0 chr10 128354031 128354223 -11962542 + MER58A DNA MER1_type 16 224 0 247 358 0 9 chr10 128355185 128355294 -11961471 + MIR SINE MIR 58 165 -97 868 294 115 24 chr10 128355852 128356402 -11960363 - L2 LINE L2 -1 3312 2720 11500 190 33 39 chr10 128356649 128357012 -11959753 - L1PA12 LINE L1 -2761 4823 4459 299 145 97 32 chr10 128357012 128357074 -11959691 - THE1C LTR MaLR -309 66 1 12018 93 11 28 chr10 128357074 128358681 -11958084 - THE1B-int LTR MaLR 0 1580 1 2543 131 22 6 chr10 128358681 128359039 -11957726 - THE1B LTR MaLR 0 364 1 11500 190 33 39 chr10 128359039 128361318 -11955447 - L1PA12 LINE L1 -3122 4462 1344 313 281 180 8 chr10 128361379 128361507 -11955258 + L2 LINE L2 3163 3312 -1 193 233 23 0 chr10 128363365 128363408 -11953357 + MIR SINE MIR 2 45 -217 5621 174 49 78 chr10 128363522 128363655 -11953110 - L1 LINE L1 -1620 4526 4391 339 65 22 0 chr10 128363655 128363701 -11953064 + MSTB1 LTR MaLR 1 47 -385 5621 174 49 78 chr10 128363701 128364237 -11952528 - L1 LINE L1 -1755 4391 3841 2929 139 5 16 chr10 128364237 128364668 -11952097 + MSTC LTR MaLR 3 428 0 5621 174 49 78 chr10 128364668 128365340 -11951425 - L1 LINE L1 -2305 3841 3179 655 260 150 4 chr10 128365391 128365635 -11951130 + L2 LINE L2 2772 3043 -270 470 262 59 38 chr10 128365773 128366121 -11950644 - MLT1J2 LTR MaLR -59 391 1 26 30 0 0 chr10 128366266 128366299 -11950466 + AT_rich Low_complexity Low_complexity 1 33 0 224 250 0 29 chr10 128366324 128366428 -11950337 + A-rich Low_complexity Low_complexity 1 101 0 24 0 0 0 chr10 128366610 128366634 -11950131 + AT_rich Low_complexity Low_complexity 1 24 0 1423 213 100 128 chr10 128367551 128368222 -11948543 - MLT1E LTR MaLR -2 591 1 420 303 197 13 chr10 128369238 128369472 -11947293 - L3 LINE CR1 -52 1525 1249 308 265 160 65 chr10 128369528 128369822 -11946943 - LTR16A1 LTR ERVL 0 457 136 34 0 0 0 chr10 128369863 128369897 -11946868 + AT_rich Low_complexity Low_complexity 1 34 0 410 277 207 46 chr10 128370033 128370242 -11946523 + HAL1 LINE L1 556 730 -1777 255 31 0 0 chr10 128370242 128370274 -11946491 + (CA)n Simple_repeat Simple_repeat 2 33 0 410 277 207 46 chr10 128370274 128370677 -11946088 + HAL1 LINE L1 730 1267 -1240 2268 233 96 62 chr10 128370691 128371496 -11945269 + HAL1 LINE L1 1496 2341 -166 1488 212 100 92 chr10 128371496 128371593 -11945172 - MLT1D LTR MaLR 0 505 410 2437 94 0 0 chr10 128371593 128371901 -11944864 + AluSq SINE Alu 1 308 -5 1488 212 100 92 chr10 128371901 128372304 -11944461 - MLT1D LTR MaLR -95 410 1 2268 233 96 62 chr10 128372304 128372475 -11944290 + HAL1 LINE L1 2341 2505 -2 267 114 0 0 chr10 128373223 128373267 -11943498 + (TG)n Simple_repeat Simple_repeat 1 44 0 416 308 22 28 chr10 128373389 128373554 -11943211 - MIR SINE MIR -62 146 2 264 292 28 0 chr10 128374171 128374243 -11942522 + MLT1G1 LTR MaLR 465 538 -57 2737 215 63 120 chr10 128374250 128375638 -11941127 + L2 LINE L2 1797 3108 -205 185 371 14 0 chr10 128375796 128375866 -11940899 + MIR3 SINE MIR 88 158 -50 544 303 141 33 chr10 128375993 128376419 -11940346 + MLT1K LTR MaLR 1 472 -4 191 315 68 0 chr10 128376889 128376962 -11939803 + L3 LINE CR1 1059 1136 -441 337 213 32 43 chr10 128377059 128377153 -11939612 - MIR3 SINE MIR -17 191 99 808 232 58 21 chr10 128377194 128377362 -11939403 - MER112 DNA MER1_type -4 252 71 315 49 0 0 chr10 128377362 128377403 -11939362 + (CA)n Simple_repeat Simple_repeat 2 42 0 808 232 58 21 chr10 128377403 128377475 -11939290 - MER112 DNA MER1_type -185 71 3 449 284 93 12 chr10 128377568 128377730 -11939035 - MER5B DNA MER1_type 0 178 4 3608 222 11 25 chr10 128377983 128378644 -11938121 + L1M4 LINE L1 3640 4288 -1858 1896 151 7 10 chr10 128378644 128378942 -11937823 - AluJb SINE Alu -15 297 1 3608 222 11 25 chr10 128378942 128379153 -11937612 + L1M4 LINE L1 4288 4500 -1646 473 183 21 11 chr10 128379343 128379436 -11937329 + MLT1A2 LTR MaLR 4 97 -277 1593 170 44 26 chr10 128379451 128379909 -11936856 + MER34 LTR ERV1 27 541 -1 1198 215 33 33 chr10 128379913 128380187 -11936578 + MLT1A2 LTR MaLR 101 374 0 381 271 33 41 chr10 128380210 128380332 -11936433 + L2 LINE L2 3187 3307 -6 220 333 157 0 chr10 128380407 128380515 -11936250 + MIR SINE MIR 120 244 -18 205 200 0 0 chr10 128380532 128380572 -11936193 + (TTA)n Simple_repeat Simple_repeat 2 41 0 196 262 0 0 chr10 128380572 128380614 -11936151 + L2 LINE L2 3230 3271 -1 2267 107 10 0 chr10 128380648 128380947 -11935818 + AluSx SINE Alu 1 302 -10 339 392 18 31 chr10 128382292 128382519 -11934246 + MIR SINE MIR 1 224 -38 432 300 99 21 chr10 128383367 128383600 -11933165 - MIR SINE MIR -10 252 2 287 290 56 37 chr10 128383785 128383892 -11932873 - MIR3 SINE MIR -9 199 91 222 219 0 0 chr10 128383904 128383945 -11932820 - L2 LINE L2 -8 3305 3265 217 302 138 35 chr10 128384956 128385072 -11931693 - L2 LINE L2 0 3313 3186 571 322 7 44 chr10 128385189 128385459 -11931306 + MIR SINE MIR 3 262 0 233 213 0 21 chr10 128385506 128385553 -11931212 + GA-rich Low_complexity Low_complexity 3 48 0 464 220 8 0 chr10 128385560 128385678 -11931087 + G-rich Low_complexity Low_complexity 1 119 0 1099 219 17 13 chr10 128386203 128386440 -11930325 - MSTD LTR MaLR -158 238 1 869 293 45 53 chr10 128386577 128386922 -11929843 + MLT1L LTR MaLR 146 489 -126 1647 137 117 23 chr10 128386922 128387229 -11929536 + MER44D DNA MER2_type 1 606 -3 869 293 45 53 chr10 128387229 128387279 -11929486 + MLT1L LTR MaLR 489 538 -77 2412 92 0 0 chr10 128387283 128387586 -11929179 + AluSc SINE Alu 3 305 -4 486 278 59 24 chr10 128387640 128387809 -11928956 + L2 LINE L2 2622 2796 -518 1290 156 170 14 chr10 128387810 128388086 -11928679 - MLT1F LTR MaLR 0 542 224 219 270 22 65 chr10 128388803 128388988 -11927777 + GA-rich Low_complexity Low_complexity 4 180 0 279 79 0 0 chr10 128389313 128389351 -11927414 + (GGGAA)n Simple_repeat Simple_repeat 2 39 0 288 300 229 31 chr10 128389806 128390029 -11926736 - L2 LINE L2 -7 3306 3040 268 193 207 114 chr10 128390372 128390455 -11926310 + L2 LINE L2 2606 2680 -634 1284 129 20 15 chr10 128390455 128390657 -11926108 + L1PA16 LINE L1 5962 6164 -2 268 193 207 114 chr10 128390657 128390713 -11926052 + L2 LINE L2 2680 2758 -556 280 138 17 17 chr10 128390833 128390891 -11925874 - Charlie7 DNA MER1_type -47 2565 2508 316 157 191 0 chr10 128390894 128390983 -11925782 - Charlie7 DNA MER1_type -2457 155 50 30 0 0 0 chr10 128391279 128391309 -11925456 + AT_rich Low_complexity Low_complexity 1 30 0 1774 133 59 7 chr10 128391317 128391431 -11925334 + AluSx SINE Alu 1 108 -204 360 0 0 0 chr10 128391431 128391471 -11925294 + (CA)n Simple_repeat Simple_repeat 1 40 0 1774 133 59 7 chr10 128391471 128391627 -11925138 + AluSx SINE Alu 108 285 -27 34 24 0 0 chr10 128391627 128391668 -11925097 + AT_rich Low_complexity Low_complexity 1 41 0 231 133 0 0 chr10 128392061 128392106 -11924659 + (CA)n Simple_repeat Simple_repeat 1 45 0 1928 148 22 25 chr10 128392156 128392474 -11924291 + MER7A DNA MER2_type 1 315 -31 1027 140 0 12 chr10 128392778 128392942 -11923823 - AluSg/x SINE Alu -5 307 146 2068 161 0 0 chr10 128393394 128393704 -11923061 - AluSx SINE Alu -2 310 1 2260 116 0 0 chr10 128394139 128394442 -11922323 - AluSx SINE Alu -9 303 1 580 207 40 56 chr10 128394546 128394744 -11922021 - L1MC5 LINE L1 -31 7930 7736 1540 153 24 51 chr10 128394744 128395039 -11921726 + AluJo SINE Alu 1 287 -25 432 158 35 0 chr10 128395119 128395290 -11921475 + (TA)n Simple_repeat Simple_repeat 2 178 0 27 49 0 0 chr10 128395295 128395336 -11921429 + AT_rich Low_complexity Low_complexity 1 41 0 513 161 18 0 chr10 128395340 128395508 -11921257 + (TA)n Simple_repeat Simple_repeat 1 171 0 1724 180 52 85 chr10 128395531 128396131 -11920634 - L1MC5 LINE L1 -209 7752 7173 1438 250 74 74 chr10 128396234 128397999 -11918766 - L1MC5 LINE L1 -833 7128 5385 2466 94 0 0 chr10 128397999 128398308 -11918457 + AluSx SINE Alu 1 309 -3 1438 250 74 74 chr10 128398308 128398380 -11918385 - L1MC5 LINE L1 -2576 5385 5314 609 312 51 62 chr10 128398483 128399128 -11917637 - L1MC5 LINE L1 -864 5282 4645 214 204 0 23 chr10 128399219 128399263 -11917502 + L2 LINE L2 3213 3255 -17 21 71 0 0 chr10 128399403 128399445 -11917320 + AT_rich Low_complexity Low_complexity 1 42 0 404 233 67 25 chr10 128402818 128402938 -11913827 - MIR SINE MIR -70 192 68 180 0 0 0 chr10 128403818 128403838 -11912927 + (A)n Simple_repeat Simple_repeat 1 20 0 355 215 13 25 chr10 128404266 128404345 -11912420 + MER5B DNA MER1_type 29 106 -72 190 236 8 154 chr10 128404267 128404390 -11912375 - MER5B DNA MER1_type -29 149 45 * 318 318 68 8 chr10 128404370 128404502 -11912263 + MIR SINE MIR 28 168 -40 2189 83 73 3 chr10 128407004 128407293 -11909472 - AluY SINE Alu -2 309 1 328 298 168 27 chr10 128407786 128408078 -11908687 + MARNA DNA Mariner 181 513 -73 2271 102 7 0 chr10 128408521 128408815 -11907950 + AluSc SINE Alu 2 297 -12 1449 119 0 0 chr10 128409179 128409373 -11907392 - AluSc SINE Alu -8 301 108 2338 92 0 0 chr10 128409979 128410274 -11906491 + AluSg SINE Alu 1 295 -15 219 204 20 20 chr10 128411251 128411300 -11905465 + L2 LINE L2 3209 3257 -15 1886 166 0 3 chr10 128411645 128411928 -11904837 - AluJo SINE Alu -30 282 1 2311 105 7 0 chr10 128413761 128414065 -11902700 + AluSg SINE Alu 1 306 -4 2340 96 0 0 chr10 128415252 128415545 -11901220 + AluSc SINE Alu 1 293 -16 228 120 0 120 chr10 128416825 128416875 -11899890 + Alu SINE Alu 126 169 -134 1314 164 44 0 chr10 128417357 128417583 -11899182 - MER46A DNA MER2_type 0 236 1 263 303 10 30 chr10 128417960 128418059 -11898706 + GA-rich Low_complexity Low_complexity 2 98 0 29 0 0 0 chr10 128418841 128418870 -11897895 + AT_rich Low_complexity Low_complexity 1 29 0 431 290 78 66 chr10 128418882 128419216 -11897549 + L2 LINE L2 2806 3143 -170 1328 165 40 40 chr10 128419236 128419508 -11897257 - AluJo SINE Alu -1 311 40 2158 108 0 3 chr10 128419869 128420155 -11896610 - AluSq SINE Alu -16 297 13 228 245 0 0 chr10 128420772 128420821 -11895944 - MER91 DNA MER1_type -91 49 1 222 339 151 33 chr10 128420838 128421142 -11895623 + L2 LINE L2 2932 3271 -1 441 259 30 111 chr10 128421307 128421604 -11895161 - L2 LINE L2 0 3313 3041 2187 115 17 0 chr10 128422017 128422312 -11894453 + AluSx SINE Alu 1 300 -12 2626 122 63 5 chr10 128423615 128424042 -11892723 - Tigger2 DNA MER2_type 0 2718 2267 499 119 0 0 chr10 128424026 128424093 -11892672 - Tigger2 DNA MER2_type -2649 69 3 * 180 200 0 0 chr10 128424250 128424290 -11892475 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 238 150 50 67 chr10 128424432 128424492 -11892273 - L2 LINE L2 -2 3270 3212 362 247 264 6 chr10 128424500 128424678 -11892087 - MIR SINE MIR -22 240 17 328 239 125 118 chr10 128424845 128425134 -11891631 - L3 LINE CR1 -340 1237 947 1698 109 13 0 chr10 128425553 128425783 -11890982 + AluSp SINE Alu 64 296 -17 893 306 52 3 chr10 128426128 128426419 -11890346 - MLT1K LTR MaLR -162 426 122 2147 116 3 3 chr10 128426993 128427294 -11889471 - AluSc SINE Alu -8 301 1 337 226 38 3 chr10 128427321 128427408 -11889357 + MLT2E LTR ERVL 37 131 -530 272 239 149 22 chr10 128428420 128428554 -11888211 + MIR SINE MIR 8 158 -104 497 143 77 0 chr10 128429129 128429220 -11887545 - L1PA11 LINE L1 0 6174 6077 373 238 10 116 chr10 128429424 128429612 -11887153 - MER106B DNA MER1_type -2 1057 851 2306 110 0 0 chr10 128429612 128429912 -11886853 + AluSx SINE Alu 1 300 -12 373 238 10 116 chr10 128429912 128429982 -11886783 - MER106B DNA MER1_type -208 851 1 186 309 41 10 chr10 128430402 128430499 -11886266 - L2 LINE L2 0 3272 3173 808 297 122 0 chr10 128430619 128430915 -11885850 - LTR16B LTR ERVL -132 332 1 182 234 109 60 chr10 128431863 128432047 -11884718 + L2 LINE L2 2899 3091 -181 2040 208 21 7 chr10 128433001 128433437 -11883328 + MLT1C LTR MaLR 6 405 -23 379 277 20 0 chr10 128437192 128437293 -11879472 + MIR SINE MIR 84 186 -76 1077 220 4 34 chr10 128437454 128437690 -11879075 + MER8 DNA MER2_type 1 229 -10 230 345 34 25 chr10 128437810 128437929 -11878836 + L2 LINE L2 3153 3272 0 957 175 23 17 chr10 128438323 128438500 -11878265 - MER45A DNA AcHobo 0 178 1 507 246 78 0 chr10 128438972 128439114 -11877651 - MLT1K LTR MaLR -2 586 434 1804 125 79 0 chr10 128439455 128439734 -11877031 + MER1B DNA MER1_type 39 339 0 3454 226 92 21 chr10 128440726 128441710 -11875055 + L1MC4a LINE L1 6753 7805 -3 1607 187 0 56 chr10 128442282 128442603 -11874162 - AluJo SINE Alu -9 303 1 237 262 0 0 chr10 128443159 128443220 -11873545 - MIR SINE MIR -4 258 198 30 45 0 0 chr10 128443271 128443315 -11873450 + AT_rich Low_complexity Low_complexity 1 44 0 195 42 0 0 chr10 128443576 128443600 -11873165 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7588 34 0 3 chr10 128443600 128444668 -11872097 - L1PA5 LINE L1 -9 6145 5077 268 218 36 0 chr10 128444815 128444870 -11871895 + L2 LINE L2 3248 3304 -9 1526 228 23 30 chr10 128444958 128445353 -11871412 - MSTD LTR MaLR 0 396 5 3298 229 37 15 chr10 128445353 128446067 -11870698 - MSTD-int LTR MaLR -1 1734 971 3812 249 24 39 chr10 128446384 128447468 -11869297 - MSTD-int LTR MaLR -666 1069 2 795 180 58 115 chr10 128447472 128447889 -11868876 - MSTD LTR MaLR -2 394 2 953 189 7 0 chr10 128448416 128448569 -11868196 - MSTD LTR MaLR 0 396 243 187 333 37 37 chr10 128450350 128450458 -11866307 + MER5B DNA MER1_type 29 136 -42 239 264 164 50 chr10 128453811 128453970 -11862795 + MER20B DNA MER1_type 56 232 -551 2730 50 0 0 chr10 128453988 128454311 -11862454 + L1PA5 LINE L1 5684 6006 -148 230 283 0 0 chr10 128454311 128454364 -11862401 + C-rich Low_complexity Low_complexity 5 57 0 2208 109 0 37 chr10 128454886 128455207 -11861558 - AluSc SINE Alu 0 309 1 1694 175 3 26 chr10 128455741 128456050 -11860715 - AluJb SINE Alu -10 302 1 2168 129 0 13 chr10 128456053 128456363 -11860402 - AluSg SINE Alu -4 306 1 1249 187 18 0 chr10 128457668 128457887 -11858878 - MER58A DNA MER1_type 0 224 2 701 254 119 5 chr10 128460125 128460326 -11856439 + MER58A DNA MER1_type 1 224 0 297 281 134 39 chr10 128460409 128460768 -11855997 + L1ME4a LINE L1 5725 6117 -4 2056 87 0 22 chr10 128460806 128461081 -11855684 + AluSx SINE Alu 36 304 -8 222 37 0 0 chr10 128461226 128461253 -11855512 + (A)n Simple_repeat Simple_repeat 1 27 0 267 79 0 0 chr10 128461464 128461502 -11855263 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2277 23 4 0 chr10 128462676 128462942 -11853823 - L1PA4 LINE L1 -3 6152 5886 3395 18 0 0 chr10 128462943 128463324 -11853441 + L1P2 LINE L1 5355 5735 -420 446 190 20 0 chr10 128463640 128463740 -11853025 + GA-rich Low_complexity Low_complexity 2 103 0 321 292 20 0 chr10 128463740 128463851 -11852914 - HsTC2 DNA Tc2 -63 1835 2 319 304 170 17 chr10 128464635 128464865 -11851900 - L3 LINE CR1 -502 1075 811 342 305 17 8 chr10 128464940 128465058 -11851707 + L2 LINE L2 3195 3313 0 194 407 0 0 chr10 128465061 128465147 -11851618 - L3 LINE CR1 -764 813 728 1089 231 17 94 chr10 128465181 128465287 -11851478 + MER58B DNA MER1_type 1 114 -2306 1594 201 3 3 chr10 128465287 128465570 -11851195 - AluJo SINE Alu -28 284 2 1089 231 17 94 chr10 128465570 128465823 -11850942 + MER58B DNA MER1_type 114 332 -9 247 286 32 48 chr10 128465841 128465967 -11850798 - L3 LINE CR1 -904 673 550 2487 92 0 0 chr10 128467584 128467889 -11848876 + AluSc SINE Alu 1 305 -4 227 277 60 0 chr10 128468582 128468665 -11848100 + L1MEc LINE L1 294 381 -6015 440 283 87 48 chr10 128469079 128469379 -11847386 + L1MEc LINE L1 838 1061 -5052 2077 146 0 0 chr10 128469379 128469673 -11847092 + AluSx SINE Alu 17 310 -2 440 283 87 48 chr10 128469673 128469902 -11846863 + L1MEc LINE L1 1061 1280 -4833 1449 60 0 11 chr10 128470106 128470291 -11846474 + L1PA5 LINE L1 5972 6154 0 1097 234 8 12 chr10 128470302 128470559 -11846206 + MER20B DNA MER1_type 261 516 -267 584 209 76 33 chr10 128470614 128470825 -11845940 + MER20B DNA MER1_type 476 695 -88 1928 127 51 54 chr10 128470827 128471158 -11845607 + MER1B DNA MER1_type 10 339 0 237 279 58 12 chr10 128471165 128471251 -11845514 + MER20B DNA MER1_type 693 782 -1 283 328 127 15 chr10 128471977 128472245 -11844520 - L2 LINE L2 -135 3178 2881 651 269 88 6 chr10 128472357 128472539 -11844226 + MLT1F1 LTR MaLR 1 197 -370 898 29 0 0 chr10 128472684 128472788 -11843977 + L1P2 LINE L1 5632 5735 -420 386 179 24 0 chr10 128473105 128473189 -11843576 + GA-rich Low_complexity Low_complexity 3 88 0 257 309 24 0 chr10 128473230 128473314 -11843451 - HsTC2 DNA Tc2 -1811 87 2 225 320 32 24 chr10 128474437 128474562 -11842203 - MER5A DNA MER1_type -1 188 63 631 272 109 0 chr10 128476664 128476866 -11839899 - MER58A DNA MER1_type 0 224 1 222 289 133 0 chr10 128476883 128476966 -11839799 + L2 LINE L2 3177 3270 -2 549 137 196 46 chr10 128477117 128477270 -11839495 + MER53 DNA DNA 5 180 -9 27 0 0 0 chr10 128478703 128478730 -11838035 + AT_rich Low_complexity Low_complexity 1 27 0 202 188 109 0 chr10 128479258 128479322 -11837443 + MIR SINE MIR 120 190 -72 2147 118 7 0 chr10 128479429 128479716 -11837049 - AluSx SINE Alu -23 289 1 192 414 0 0 chr10 128482057 128482115 -11834650 + T-rich Low_complexity Low_complexity 1 58 0 208 316 35 0 chr10 128483524 128483581 -11833184 - MIR SINE MIR -115 93 35 702 282 79 22 chr10 128483842 128484069 -11832696 - MIR SINE MIR -21 241 2 2534 63 0 105 chr10 128484799 128485372 -11831393 - L1PA5 LINE L1 -3 6151 5639 1153 181 74 129 chr10 128485822 128486270 -11830495 + LTR45B LTR ERV1 67 489 0 345 313 39 8 chr10 128486442 128486570 -11830195 + MIR SINE MIR 12 143 -119 222 37 0 0 chr10 128486980 128487007 -11829758 + (CA)n Simple_repeat Simple_repeat 1 27 0 679 222 103 32 chr10 128487738 128487990 -11828775 - MER66B LTR ERV1 -145 341 72 513 264 25 12 chr10 128488267 128488430 -11828335 + MIR SINE MIR 2 166 -96 380 199 94 88 chr10 128489807 128489978 -11826787 - MER117 DNA MER1_type -24 173 2 2041 166 82 14 chr10 128490090 128490530 -11826235 + Charlie4a DNA MER1_type 39 508 0 265 267 74 22 chr10 128490655 128490790 -11825975 - L1ME4a LINE L1 -4 6117 5976 1731 227 60 8 chr10 128492267 128492946 -11823819 - L1ME4a LINE L1 -430 5734 5022 24 0 0 0 chr10 128492983 128493007 -11823758 + AT_rich Low_complexity Low_complexity 1 24 0 381 346 0 13 chr10 128493718 128493877 -11822888 + MIR SINE MIR 1 157 -105 530 254 161 60 chr10 128494281 128494711 -11822054 + L1ME4a LINE L1 5582 6054 -67 1877 172 21 38 chr10 128495237 128495609 -11821156 + MLT2D LTR ERVL 1 366 -48 4752 163 59 13 chr10 128495656 128496566 -11820199 + Tigger3b DNA MER2_type 2 953 -278 831 194 33 59 chr10 128496568 128496841 -11819924 - AluSx SINE Alu -17 295 30 260 196 0 0 chr10 128498248 128498294 -11818471 - MLT2D LTR ERVL 0 414 369 184 164 0 36 chr10 128498357 128498412 -11818353 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1364 143 117 0 chr10 128498414 128498645 -11818120 - Tigger3(Golem) DNA MER2_type -1 3028 2771 276 200 100 14 chr10 128499028 128499098 -11817667 + L1ME4a LINE L1 5975 6050 -71 260 292 117 25 chr10 128499294 128499414 -11817351 - L2 LINE L2 -928 2386 2256 291 323 0 16 chr10 128499621 128499745 -11817020 - LTR67 LTR ERVL -9 548 427 21 36 0 0 chr10 128500482 128500510 -11816255 + AT_rich Low_complexity Low_complexity 1 28 0 1986 71 0 16 chr10 128500985 128501238 -11815527 + AluY SINE Alu 30 278 -33 26 0 0 0 chr10 128501750 128501776 -11814989 + AT_rich Low_complexity Low_complexity 1 26 0 794 252 193 31 chr10 128502059 128502349 -11814416 + MLT1C LTR MaLR 168 466 -1 21 0 0 0 chr10 128503727 128503748 -11813017 + AT_rich Low_complexity Low_complexity 1 21 0 316 304 71 58 chr10 128504228 128504468 -11812297 + MIR SINE MIR 20 262 0 213 282 30 38 chr10 128505203 128505334 -11811431 - L2 LINE L2 -17 3296 3167 235 24 95 0 chr10 128505722 128505764 -11811001 + T-rich Low_complexity Low_complexity 1 46 0 351 150 0 0 chr10 128505910 128505970 -11810795 + (TGAA)n Simple_repeat Simple_repeat 3 62 0 191 284 25 12 chr10 128506608 128506689 -11810076 + MIR SINE MIR 170 251 -11 677 246 37 5 chr10 128507356 128507543 -11809222 + MIR SINE MIR 20 212 -50 374 0 0 21 chr10 128507579 128507626 -11809139 + (TG)n Simple_repeat Simple_repeat 2 47 0 2225 100 0 19 chr10 128510111 128510420 -11806345 + AluSc SINE Alu 1 303 -6 343 349 47 0 chr10 128510525 128510674 -11806091 + MIR SINE MIR 57 212 -50 252 250 47 0 chr10 128511255 128511319 -11805446 - MARNA DNA Mariner -32 554 488 233 265 48 36 chr10 128511429 128511512 -11805253 + MIR SINE MIR 176 259 -3 300 237 43 11 chr10 128511848 128511941 -11804824 + MLT1J1 LTR MaLR 1 96 -350 308 271 69 101 chr10 128512021 128512209 -11804556 + MLT1J2 LTR MaLR 269 450 0 252 221 26 26 chr10 128512578 128512655 -11804110 - MIR SINE MIR -73 135 59 1306 138 60 0 chr10 128513688 128513906 -11802859 - L1MB5 LINE L1 -181 5993 5763 529 312 107 34 chr10 128514101 128514607 -11802158 + L1ME4a LINE L1 5573 6115 -6 850 287 25 15 chr10 128514615 128515009 -11801756 + MER57A LTR ERV1 6 403 0 1076 118 0 34 chr10 128515009 128515054 -11801711 + L1MD1 LINE L1 6070 6115 -127 2023 129 7 0 chr10 128515054 128515361 -11801404 - AluSc SINE Alu 0 309 1 1076 118 0 34 chr10 128515361 128515492 -11801273 + L1MD1 LINE L1 6115 6241 -1 979 175 39 35 chr10 128515494 128515583 -11801182 + L1ME1 LINE L1 4985 5072 -1074 1956 174 43 6 chr10 128515583 128515933 -11800832 - MLT1A1 LTR MaLR -2 363 1 979 175 39 35 chr10 128515933 128516129 -11800636 + L1ME1 LINE L1 5072 5271 -875 246 62 0 0 chr10 128516138 128516170 -11800595 + (TA)n Simple_repeat Simple_repeat 1 32 0 2418 240 78 35 chr10 128516184 128516979 -11799786 + L1ME1 LINE L1 5276 6111 -55 1821 136 0 4 chr10 128516979 128517251 -11799514 - AluSx SINE Alu -7 305 35 2418 240 78 35 chr10 128517251 128517305 -11799460 + L1ME1 LINE L1 6111 6161 -5 651 172 70 0 chr10 128517329 128517457 -11799308 + Charlie1 DNA MER1_type 2625 2761 0 854 183 25 71 chr10 128518993 128519190 -11797575 + MER5A DNA MER1_type 2 189 0 239 270 161 52 chr10 128521084 128521258 -11795507 - MIR3 SINE MIR 0 208 16 203 262 0 0 chr10 128521639 128521681 -11795084 - MIR SINE MIR -3 259 218 188 255 0 21 chr10 128521649 128521696 -11795069 - L2 LINE L2 -19 3294 3249 * 2263 88 0 7 chr10 128521774 128522068 -11794697 - AluY SINE Alu -15 296 5 995 140 28 0 chr10 128522068 128522246 -11794519 - MSTB LTR MaLR -243 183 1 340 246 18 27 chr10 128522246 128522367 -11794398 - L1M LINE L1 -761 5405 5279 239 77 0 26 chr10 128524104 128524143 -11792622 + (TCCC)n Simple_repeat Simple_repeat 2 39 0 2370 98 0 10 chr10 128524226 128524531 -11792234 + AluSx SINE Alu 1 302 -10 315 271 59 0 chr10 128524532 128524617 -11792148 + MIR SINE MIR 167 256 -6 438 216 95 82 chr10 128524928 128524981 -11791784 - L1MB5 LINE L1 -8 6166 6115 1877 133 0 17 chr10 128524981 128525275 -11791490 + AluSc SINE Alu 5 293 -16 438 216 95 82 chr10 128525275 128525453 -11791312 - L1MB5 LINE L1 -59 6115 5932 204 40 0 0 chr10 128526427 128526452 -11790313 + (CA)n Simple_repeat Simple_repeat 1 25 0 183 80 0 0 chr10 128527246 128527271 -11789494 + (TAGG)n Simple_repeat Simple_repeat 1 25 0 743 237 23 0 chr10 128527492 128527665 -11789100 - MER115 DNA AcHobo -12 681 505 2205 107 7 7 chr10 128527672 128527972 -11788793 + AluSc SINE Alu 1 300 -9 548 313 43 30 chr10 128528172 128528571 -11788194 - L1MDa LINE L1 -3432 3108 2705 2476 115 34 102 chr10 128528586 128529057 -11787708 - Tigger2 DNA MER2_type 0 2718 2280 444 159 0 0 chr10 128529055 128529124 -11787641 - Tigger2 DNA MER2_type -2649 69 1 * 395 240 69 20 chr10 128529178 128529377 -11787388 - L1MDa LINE L1 -3905 2635 2435 1007 296 53 20 chr10 128531277 128531673 -11785092 + MLT1I LTR MaLR 1 409 0 472 229 35 83 chr10 128532001 128532145 -11784620 + MER20 DNA MER1_type 1 137 -82 2354 137 0 3 chr10 128532248 128532583 -11784182 - MER1B DNA MER1_type -5 334 1 2933 191 45 43 chr10 128532591 128533162 -11783603 + L1MC3 LINE L1 7109 7683 -102 2078 134 7 0 chr10 128533162 128533453 -11783312 + AluSx SINE Alu 1 293 -19 2933 191 45 43 chr10 128533453 128533553 -11783212 + L1MC3 LINE L1 7683 7781 -4 2179 116 3 10 chr10 128534271 128534573 -11782192 + AluSg SINE Alu 1 300 -10 315 271 59 0 chr10 128534574 128534659 -11782106 + MIR SINE MIR 167 256 -6 3931 154 54 14 chr10 128534970 128535023 -11781742 - L1MB5 LINE L1 -8 6166 6117 2132 119 0 3 chr10 128535023 128535316 -11781449 + AluY SINE Alu 5 296 -15 3931 154 54 14 chr10 128535316 128535931 -11780834 - L1MB5 LINE L1 -57 6117 5466 342 0 0 0 chr10 128535931 128535969 -11780796 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3931 154 54 14 chr10 128535969 128536006 -11780759 - L1MB5 LINE L1 -708 5466 5432 1563 112 112 0 chr10 128536006 128536165 -11780600 - AluSg SINE Alu -20 290 96 225 0 0 0 chr10 128536165 128536190 -11780575 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1563 112 112 0 chr10 128536190 128536262 -11780503 - AluSg SINE Alu -214 96 33 196 330 61 9 chr10 128538225 128538340 -11778425 + L3 LINE CR1 1021 1141 -436 194 316 25 25 chr10 128538904 128538983 -11777782 + L3 LINE CR1 1496 1574 -3 498 209 172 0 chr10 128539097 128539231 -11777534 + L1MA10 LINE L1 6175 6331 -3 479 206 103 16 chr10 128540267 128540393 -11776372 + Charlie8 DNA MER1_type 47 183 -2234 240 318 90 57 chr10 128540701 128540912 -11775853 + L2 LINE L2 2994 3211 -61 379 324 145 10 chr10 128541424 128541635 -11775130 - L2 LINE L2 -290 3023 2790 355 319 42 8 chr10 128541751 128541870 -11774895 + MIR SINE MIR 28 150 -112 494 279 84 44 chr10 128541886 128542112 -11774653 - L2 LINE L2 0 3313 3079 575 266 0 0 chr10 128542129 128542268 -11774497 - MIR SINE MIR -113 149 11 239 346 45 23 chr10 128542603 128542736 -11774029 - MIR SINE MIR -74 188 53 838 331 167 25 chr10 128543201 128544169 -11772596 + L2 LINE L2 2016 3114 -158 276 244 0 24 chr10 128544812 128544894 -11771871 + (TA)n Simple_repeat Simple_repeat 2 81 0 787 134 42 0 chr10 128545410 128545529 -11771236 - AluSg/x SINE Alu 0 312 189 454 280 170 75 chr10 128546250 128546285 -11770480 - L2 LINE L2 0 3313 3283 2078 146 98 15 chr10 128546285 128546621 -11770144 - THE1B LTR MaLR 0 364 1 454 280 170 75 chr10 128546621 128547039 -11769726 - L2 LINE L2 -30 3283 2817 414 0 0 0 chr10 128547890 128547936 -11768829 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2150 103 0 0 chr10 128547939 128548220 -11768545 - AluY SINE Alu -30 281 1 1845 103 28 0 chr10 128549123 128549375 -11767390 - AluY SINE Alu -12 299 41 239 262 0 16 chr10 128549480 128549541 -11767224 + L2 LINE L2 3004 3063 -250 339 366 46 0 chr10 128549606 128549759 -11767006 + MIR SINE MIR 92 251 -11 196 298 125 39 chr10 128549808 128549912 -11766853 + L2 LINE L2 3154 3266 -6 489 241 12 93 chr10 128549945 128550107 -11766658 - L2 LINE L2 -5 3308 3160 189 195 0 0 chr10 128550151 128550192 -11766573 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr10 128550386 128550407 -11766358 + AT_rich Low_complexity Low_complexity 1 21 0 5842 18 0 0 chr10 128550437 128551060 -11765705 - L1PA2 LINE L1 -4 6151 5529 323 350 77 73 chr10 128551748 128552200 -11764565 + L2 LINE L2 2818 3271 -1 2392 138 9 52 chr10 128553235 128553655 -11763110 - L1MB5 LINE L1 -10 6164 5763 646 314 108 28 chr10 128553850 128554357 -11762408 + L1ME4a LINE L1 5573 6120 -1 1594 126 122 15 chr10 128555244 128555514 -11761251 + AluSg1 SINE Alu 1 299 -10 2112 98 11 0 chr10 128555537 128555814 -11760951 + AluSg SINE Alu 1 280 -30 414 0 0 0 chr10 128555817 128555863 -11760902 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 513 284 165 70 chr10 128556714 128557132 -11759633 + L2 LINE L2 2817 3283 -30 2078 146 98 15 chr10 128557132 128557468 -11759297 + THE1B LTR MaLR 1 364 0 513 284 165 70 chr10 128557468 128557503 -11759262 + L2 LINE L2 3283 3313 0 204 40 0 0 chr10 128558907 128558932 -11757833 + (CA)n Simple_repeat Simple_repeat 1 25 0 183 80 0 0 chr10 128559724 128559749 -11757016 + (TAGG)n Simple_repeat Simple_repeat 1 25 0 846 294 70 31 chr10 128559970 128560150 -11756615 - MER115 DNA AcHobo -12 681 509 2184 97 10 3 chr10 128560150 128560440 -11756325 + AluSc SINE Alu 1 292 -17 846 294 70 31 chr10 128560440 128560900 -11755865 - MER115 DNA AcHobo -184 509 2 1663 243 26 56 chr10 128560985 128561525 -11755240 - MLT1F LTR MaLR 0 542 19 2056 148 7 0 chr10 128561611 128561921 -11754844 + AluSq SINE Alu 1 312 -1 24 0 0 0 chr10 128562258 128562282 -11754483 + AT_rich Low_complexity Low_complexity 1 24 0 3602 135 2 13 chr10 128562461 128562994 -11753771 + MER1A DNA MER1_type 1 527 0 530 202 9 0 chr10 128564198 128564307 -11752458 + MIR SINE MIR 108 217 -45 241 205 13 13 chr10 128565142 128565181 -11751584 + A-rich Low_complexity Low_complexity 1 39 -39 1018 134 87 0 chr10 128565181 128565353 -11751412 - L1PA10 LINE L1 0 6168 5982 241 205 13 13 chr10 128565353 128565391 -11751374 + A-rich Low_complexity Low_complexity 38 78 0 2236 108 20 3 chr10 128566268 128566573 -11750192 + AluSx SINE Alu 1 310 -2 2816 16 0 0 chr10 128567010 128567316 -11749449 - AluY SINE Alu -5 306 1 2173 112 10 3 chr10 128567412 128567706 -11749059 + AluSx SINE Alu 1 296 -16 2201 115 3 0 chr10 128568725 128569013 -11747752 + AluSx SINE Alu 1 289 -23 467 270 58 11 chr10 128569122 128569296 -11747469 - MIR SINE MIR -73 189 8 2108 140 48 31 chr10 128570191 128570549 -11746216 + THE1B LTR MaLR 1 364 0 255 93 0 0 chr10 128570685 128570728 -11746037 + (A)n Simple_repeat Simple_repeat 1 43 0 339 269 8 42 chr10 128570833 128570952 -11745813 - L3 LINE CR1 -200 1377 1263 208 221 198 12 chr10 128571192 128571278 -11745487 - MIR3 SINE MIR -14 194 93 4069 132 79 27 chr10 128571572 128572480 -11744285 + pTR5 LTR ERV1 743 2025 -413 285 252 47 0 chr10 128572480 128572587 -11744178 + LTR30 LTR ERV1 544 655 -67 1589 75 47 0 chr10 128572589 128572802 -11743963 + LTR12 LTR ERV1 492 714 0 370 280 72 8 chr10 128572874 128572999 -11743766 + MIR SINE MIR 21 153 -109 2245 124 0 10 chr10 128573015 128573329 -11743436 + AluSx SINE Alu 1 311 -1 970 210 6 0 chr10 128573879 128574055 -11742710 + MER45A DNA AcHobo 2 178 0 207 69 0 0 chr10 128575296 128575325 -11741440 + (CA)n Simple_repeat Simple_repeat 2 30 0 774 19 37 0 chr10 128575721 128575828 -11740937 + (GAAA)n Simple_repeat Simple_repeat 4 114 0 1196 168 0 24 chr10 128576107 128576316 -11740449 + MER20 DNA MER1_type 1 204 -15 2300 92 0 7 chr10 128576810 128577105 -11739660 + AluSg SINE Alu 1 293 -17 1197 129 4 103 chr10 128577913 128578145 -11738620 - AluJb SINE Alu -18 294 86 255 216 26 86 chr10 128578491 128578607 -11738158 + L1ME LINE L1 5755 5863 -303 2283 106 0 3 chr10 128578865 128579168 -11737597 - AluSg SINE Alu -8 302 1 1917 103 0 37 chr10 128579168 128579441 -11737324 - AluSq SINE Alu -15 298 36 442 260 83 18 chr10 128579932 128580101 -11736664 - MIR SINE MIR -20 242 63 261 83 0 0 chr10 128580309 128580345 -11736420 + (TG)n Simple_repeat Simple_repeat 1 36 0 332 311 115 25 chr10 128580655 128580890 -11735875 - MIR SINE MIR -5 257 2 1330 207 65 93 chr10 128580916 128581390 -11735375 + MLT1C LTR MaLR 6 466 -1 1215 209 164 29 chr10 128582731 128583026 -11733739 + Charlie4a DNA MER1_type 1 377 -1584 2188 91 0 24 chr10 128583026 128583322 -11733443 - AluSx SINE Alu -23 289 1 1215 209 164 29 chr10 128583322 128583471 -11733294 + Charlie4a DNA MER1_type 377 505 -3 2223 102 0 11 chr10 128585867 128586151 -11730614 + AluSg SINE Alu 1 281 -29 402 21 0 0 chr10 128586151 128586198 -11730567 + (CA)n Simple_repeat Simple_repeat 2 48 0 333 308 0 0 chr10 128586333 128586424 -11730341 + MER5A DNA MER1_type 9 99 -90 255 252 81 90 chr10 128586484 128586595 -11730170 - MER5B DNA MER1_type -23 155 46 2308 257 29 24 chr10 128587390 128588157 -11728608 + L1MC4a LINE L1 5194 5282 -864 4102 114 128 119 chr10 128588163 128589540 -11727225 + pTR5 LTR ERV1 741 2438 0 228 211 0 0 chr10 128589543 128589581 -11727184 - MLT1B LTR MaLR -18 372 335 2591 116 3 0 chr10 128589581 128589934 -11726831 - MER1A DNA MER1_type 0 529 176 697 130 0 10 chr10 128589975 128590075 -11726690 - MER1A DNA MER1_type -342 185 87 * 1001 160 48 27 chr10 128590036 128590223 -11726542 - MLT1C LTR MaLR -43 424 234 2301 171 59 7 chr10 128590223 128590661 -11726104 - LOR1b LTR ERV1 0 461 1 1236 106 57 114 chr10 128590759 128590830 -11725935 - MLT1C LTR MaLR -233 234 161 2215 109 0 7 chr10 128590830 128591124 -11725641 - AluSq SINE Alu -21 292 1 1236 106 57 114 chr10 128591124 128591298 -11725467 - MLT1C LTR MaLR -306 161 3 5984 198 48 92 chr10 128591307 128591745 -11725020 + L1MC4a LINE L1 5941 6397 -1411 2584 65 7 0 chr10 128591745 128592053 -11724712 + AluY SINE Alu 1 310 -1 5984 198 48 92 chr10 128592053 128593317 -11723448 + L1MC4a LINE L1 6397 7549 -259 5772 129 9 8 chr10 128593317 128595359 -11721406 + L1PA15 LINE L1 4079 6163 -2 5984 198 48 92 chr10 128595359 128595604 -11721161 + L1MC4a LINE L1 7549 7803 -5 2155 119 45 0 chr10 128595662 128595998 -11720767 + L1MB3 LINE L1 5578 5928 -255 1980 143 40 34 chr10 128595998 128596349 -11720416 + MLT1A1 LTR MaLR 1 353 -12 234 111 389 0 chr10 128596353 128596407 -11720358 + FRAM/FAM SINE Alu 6 80 -86 2446 98 0 0 chr10 128598371 128598676 -11718089 - AluSx SINE Alu -7 305 1 21 36 0 0 chr10 128599751 128599779 -11716986 + AT_rich Low_complexity Low_complexity 1 28 0 279 367 20 0 chr10 128599921 128600068 -11716697 + MIR SINE MIR 113 262 0 543 215 0 0 chr10 128600253 128600374 -11716391 + (TATG)n Simple_repeat Simple_repeat 4 124 0 227 152 0 0 chr10 128600380 128600426 -11716339 - LTR66 LTR ERVL -171 439 394 189 107 0 0 chr10 128600426 128600454 -11716311 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 297 0 0 0 chr10 128600457 128600490 -11716275 + (TG)n Simple_repeat Simple_repeat 2 34 0 856 260 70 4 chr10 128600508 128600750 -11716015 + L1MD1 LINE L1 45 302 -6094 3253 237 116 30 chr10 128601023 128601412 -11715353 + L1MD1 LINE L1 287 641 -5755 2285 104 0 7 chr10 128601412 128601721 -11715044 + AluY SINE Alu 1 307 -4 3253 237 116 30 chr10 128601721 128602163 -11714602 + L1MD1 LINE L1 641 1043 -5353 210 37 0 0 chr10 128602163 128602190 -11714575 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3253 237 116 30 chr10 128602190 128602613 -11714152 + L1MD1 LINE L1 1043 1651 -4745 1847 189 35 54 chr10 128602595 128602651 -11714114 + L1MC3 LINE L1 6944 7000 -785 * 2274 109 0 3 chr10 128602651 128602953 -11713812 + AluY SINE Alu 1 301 -10 1847 189 35 54 chr10 128602953 128603253 -11713512 + L1MC3 LINE L1 7000 7293 -492 2273 158 62 15 chr10 128603253 128603658 -11713107 - MSTA LTR MaLR -4 424 1 1847 189 35 54 chr10 128603658 128603729 -11713036 + L1MC3 LINE L1 7293 7364 -421 352 238 57 0 chr10 128603774 128603879 -11712886 + L1MD1 LINE L1 1628 1738 -4658 4944 214 44 51 chr10 128604042 128604182 -11712583 + L1MD1 LINE L1 3147 3286 -2929 2421 59 0 3 chr10 128604182 128604470 -11712295 + AluY SINE Alu 1 287 -24 4944 214 44 51 chr10 128604470 128604747 -11712018 + L1MD1 LINE L1 3286 3563 -2652 2212 113 0 10 chr10 128604747 128605058 -11711707 - AluSg SINE Alu -2 308 1 4944 214 44 51 chr10 128605058 128606197 -11710568 + L1MD1 LINE L1 3563 4694 -1521 6586 37 3 1 chr10 128606204 128606981 -11709784 - L1PA5 LINE L1 -2 6152 5375 1557 196 66 21 chr10 128606983 128607407 -11709358 + L1MD1 LINE L1 4699 5141 -1074 4034 165 43 32 chr10 128607411 128608044 -11708721 + L1MD1 LINE L1 5491 6115 -196 2562 129 20 0 chr10 128608044 128608439 -11708326 + MER57A LTR ERV1 1 403 0 4034 165 43 32 chr10 128608439 128608483 -11708282 + L1MD1 LINE L1 6115 6157 -154 2079 129 4 0 chr10 128608483 128608791 -11707974 - AluSc SINE Alu 0 309 1 4034 165 43 32 chr10 128608791 128608922 -11707843 + L1MD1 LINE L1 6157 6310 -1 939 176 39 35 chr10 128608919 128609013 -11707752 + L1ME1 LINE L1 4980 5072 -1074 1836 174 43 6 chr10 128609013 128609363 -11707402 - MLT1A1 LTR MaLR -2 363 1 939 176 39 35 chr10 128609363 128609559 -11707206 + L1ME1 LINE L1 5072 5271 -875 246 62 0 0 chr10 128609568 128609600 -11707165 + (TA)n Simple_repeat Simple_repeat 1 32 0 2422 246 72 25 chr10 128609614 128610405 -11706360 + L1ME1 LINE L1 5276 6111 -55 1786 125 0 4 chr10 128610405 128610677 -11706088 - AluSx SINE Alu -7 305 35 2422 246 72 25 chr10 128610677 128610731 -11706034 + L1ME1 LINE L1 6111 6161 -5 662 164 70 0 chr10 128610755 128610883 -11705882 + Charlie1 DNA MER1_type 2625 2761 0 481 193 88 9 chr10 128612365 128612479 -11704286 + MER5A DNA MER1_type 4 126 -63 510 167 7 160 chr10 128612487 128612637 -11704128 - MER5B DNA MER1_type 0 178 52 211 273 39 78 chr10 128612659 128612787 -11703978 + MER5B DNA MER1_type 35 157 -21 319 289 53 26 chr10 128613548 128613662 -11703103 + L2 LINE L2 3116 3232 -40 1283 231 85 21 chr10 128613850 128614239 -11702526 + MLT1C LTR MaLR 54 467 0 209 304 54 27 chr10 128614259 128614371 -11702394 - MIR SINE MIR -74 188 74 341 191 59 0 chr10 128615390 128615458 -11701307 + MER53 DNA DNA 1 72 -117 806 159 43 0 chr10 128615458 128615596 -11701169 - FRAM SINE Alu -10 166 23 772 113 0 43 chr10 128615596 128615737 -11701028 - MER53 DNA DNA -54 135 1 383 319 9 9 chr10 128615738 128615854 -11700911 + MIR SINE MIR 31 146 -62 1949 107 38 0 chr10 128616280 128616571 -11700194 - AluSp SINE Alu -11 302 1 900 147 0 169 chr10 128617096 128617327 -11699438 + 7SK RNA RNA 2 193 0 2441 105 23 8 chr10 128617649 128618000 -11698765 - THE1B LTR MaLR -8 356 1 262 277 17 77 chr10 128618386 128618554 -11698211 - MIR SINE MIR -46 162 5 446 309 24 0 chr10 128619678 128619804 -11696961 + L2 LINE L2 3184 3312 -1 258 29 114 0 chr10 128619819 128619854 -11696911 - MLT2C1 LTR ERVL -8 389 351 455 150 26 9 chr10 128619858 128619971 -11696794 + (TG)n Simple_repeat Simple_repeat 1 115 0 1397 210 239 10 chr10 128619971 128620361 -11696404 - MLT2B1 LTR ERVL -41 479 1 1564 246 59 62 chr10 128620377 128620970 -11695795 + MLT1E LTR MaLR 1 591 -2 1544 156 0 130 chr10 128621874 128622221 -11694544 + AluJo SINE Alu 1 302 0 661 319 128 38 chr10 128622320 128622772 -11693993 + MLT1K LTR MaLR 35 527 -61 765 246 72 107 chr10 128622974 128623416 -11693349 - MLT1L LTR MaLR -7 517 138 531 239 42 21 chr10 128623881 128624023 -11692742 + MIR SINE MIR 53 197 -65 343 301 11 0 chr10 128624618 128624711 -11692054 + MIR SINE MIR 169 262 0 558 157 29 10 chr10 128624775 128624877 -11691888 - LTR40a LTR ERVL -56 463 360 * 767 264 61 0 chr10 128624873 128625085 -11691680 - LTR40a LTR ERVL -281 238 14 741 204 9 113 chr10 128626495 128626726 -11690039 - MER63A DNA MER1_type 0 210 4 1343 36 36 0 chr10 128627201 128627366 -11689399 - L1PA4 LINE L1 -3 6152 5982 302 0 0 26 chr10 128628801 128628840 -11687925 + (TG)n Simple_repeat Simple_repeat 1 38 0 233 154 115 0 chr10 128629154 128629206 -11687559 - L1MC5 LINE L1 -1259 6702 6645 22 35 0 0 chr10 128629507 128629536 -11687229 + AT_rich Low_complexity Low_complexity 1 29 0 1426 178 52 85 chr10 128629559 128629642 -11687123 + MLT1A2 LTR MaLR 1 85 -289 1807 189 64 3 chr10 128629642 128629986 -11686779 - MLT1A1 LTR MaLR 0 365 1 1426 178 52 85 chr10 128629986 128630289 -11686476 + MLT1A2 LTR MaLR 85 374 0 212 163 0 20 chr10 128630515 128630564 -11686201 + (CA)n Simple_repeat Simple_repeat 1 48 0 335 258 21 32 chr10 128632602 128632695 -11684070 + MLT1J LTR MaLR 93 184 -327 270 336 0 41 chr10 128632607 128632729 -11684036 + MLT2E LTR ERVL 32 148 -480 * 213 234 65 26 chr10 128633178 128633255 -11683510 - MIR SINE MIR -7 255 176 197 282 107 61 chr10 128633237 128633368 -11683397 - MIR3 SINE MIR -49 159 23 * 543 293 149 6 chr10 128633391 128633565 -11683200 + MIR SINE MIR 13 211 -51 463 250 18 18 chr10 128634213 128634325 -11682440 + MER81 DNA DNA 2 113 -1 1981 99 18 0 chr10 128635427 128635700 -11681065 - AluSq SINE Alu -12 301 24 2573 133 64 0 chr10 128636117 128636508 -11680257 - MSTB LTR MaLR 0 426 11 339 345 148 39 chr10 128636516 128637458 -11679307 + L2 LINE L2 719 1762 -1552 2250 93 0 7 chr10 128637470 128637770 -11678995 - AluSq SINE Alu -15 298 1 1075 245 25 11 chr10 128637811 128638097 -11678668 + L1ME1 LINE L1 5871 6160 -6 2136 88 3 19 chr10 128638115 128638422 -11678343 - AluY SINE Alu -9 302 1 2080 99 0 10 chr10 128638423 128638717 -11678048 - AluSx SINE Alu -12 300 10 438 148 0 12 chr10 128639297 128639378 -11677387 - L1M4 LINE L1 -744 5440 5361 258 81 0 0 chr10 128640042 128640079 -11676686 + (T)n Simple_repeat Simple_repeat 1 37 0 369 349 47 0 chr10 128640318 128640467 -11676298 - MIR SINE MIR -50 212 57 1236 100 0 0 chr10 128640570 128640740 -11676025 - AluSg/x SINE Alu -6 306 137 247 275 25 6 chr10 128641227 128641387 -11675378 + CT-rich Low_complexity Low_complexity 2 164 0 318 50 0 0 chr10 128641387 128641427 -11675338 + (CA)n Simple_repeat Simple_repeat 1 40 0 488 256 121 38 chr10 128641929 128642275 -11674490 + L2 LINE L2 2674 3051 -262 287 314 63 67 chr10 128642302 128642557 -11674208 + MLT1H LTR MaLR 24 277 -272 498 249 238 16 chr10 128642704 128642893 -11673872 + L2 LINE L2 3083 3313 0 536 89 18 36 chr10 128643134 128643246 -11673519 + (ATG)n Simple_repeat Simple_repeat 2 111 0 1994 122 7 3 chr10 128644232 128644536 -11672229 + AluSc SINE Alu 1 305 -4 234 176 0 0 chr10 128648120 128648171 -11668594 + A-rich Low_complexity Low_complexity 1 51 0 229 275 110 0 chr10 128648561 128648652 -11668113 + MER69A DNA AcHobo 14 114 -63 677 128 53 38 chr10 128648661 128648794 -11667971 - L1MB7 LINE L1 -28 6156 6022 29 0 0 0 chr10 128649762 128649791 -11666974 + AT_rich Low_complexity Low_complexity 1 29 0 667 285 41 23 chr10 128650383 128650604 -11666161 - MIR SINE MIR -34 228 4 302 235 71 10 chr10 128650801 128650899 -11665866 + L1 LINE L1 4950 5053 -1093 279 244 38 30 chr10 128651091 128651222 -11665543 + L1MC/D LINE L1 5299 5430 -2378 345 290 143 60 chr10 128651255 128651501 -11665264 + L1MC/D LINE L1 5499 5776 -2032 2084 103 3 13 chr10 128651501 128651802 -11664963 + AluSc SINE Alu 1 298 -11 345 290 143 60 chr10 128651802 128651855 -11664910 + L1MC/D LINE L1 5776 5823 -1985 2034 156 16 40 chr10 128651857 128652365 -11664400 + L1MB5 LINE L1 4937 5435 -743 752 159 24 59 chr10 128652365 128652535 -11664230 + L1MB5 LINE L1 6010 6173 -1 251 186 43 43 chr10 128652535 128652605 -11664160 + L1MC/D LINE L1 5818 5887 -1921 1623 182 94 3 chr10 128653089 128653430 -11663335 + MLT1A2 LTR MaLR 1 372 -2 1583 120 112 0 chr10 128653564 128653822 -11662943 + AluSg SINE Alu 1 287 -23 2033 106 0 3 chr10 128653833 128654141 -11662624 + AluSg SINE Alu 1 307 0 264 30 0 0 chr10 128654196 128654229 -11662536 + (CA)n Simple_repeat Simple_repeat 2 34 0 1861 101 83 4 chr10 128654482 128654758 -11662007 + AluSq SINE Alu 5 302 -11 335 297 137 27 chr10 128654863 128655082 -11661683 - MIR SINE MIR -6 256 14 443 289 23 8 chr10 128656330 128656458 -11660307 - MER5A DNA MER1_type -1 188 59 371 343 29 35 chr10 128656331 128656503 -11660262 + MER5A DNA MER1_type 17 187 -2 * 2244 107 7 0 chr10 128656517 128656827 -11659938 - AluSx SINE Alu 0 312 1 264 330 64 18 chr10 128656899 128657008 -11659757 - MIR SINE MIR -128 134 21 2809 149 10 14 chr10 128657131 128657417 -11659348 + L1MB4 LINE L1 5686 5971 -209 2328 78 0 7 chr10 128657417 128657723 -11659042 + AluY SINE Alu 1 304 -7 2809 149 10 14 chr10 128657723 128657927 -11658838 + L1MB4 LINE L1 5971 6174 -6 252 0 0 0 chr10 128658420 128658448 -11658317 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2068 121 3 0 chr10 128658760 128659057 -11657708 - AluSx SINE Alu -14 298 1 262 253 152 0 chr10 128660746 128660845 -11655920 - MER96 DNA MER1_type? -61 114 1 1392 179 96 3 chr10 128661532 128661834 -11654931 - L1MC2 LINE L1 -23 6321 5992 2131 115 3 53 chr10 128662162 128662485 -11654280 + AluSx SINE Alu 4 310 -2 1945 191 57 37 chr10 128662543 128662896 -11653869 + Charlie1b DNA MER1_type 1 369 -2392 1583 81 5 0 chr10 128662896 128663106 -11653659 - L1PA7 LINE L1 -7 6147 5937 1945 191 57 37 chr10 128663106 128663265 -11653500 + Charlie1b DNA MER1_type 369 523 0 419 313 111 24 chr10 128663271 128663479 -11653286 + MIR SINE MIR 23 248 -14 253 274 36 0 chr10 128664308 128664392 -11652373 - LTR33 LTR ERVL -117 404 318 2144 148 3 0 chr10 128664464 128664775 -11651990 + AluSx SINE Alu 1 312 0 613 263 142 37 chr10 128664943 128665266 -11651499 - MLT1I LTR MaLR 0 409 53 705 277 17 50 chr10 128665340 128665578 -11651187 - MIR SINE MIR -18 244 15 187 315 43 33 chr10 128665928 128666020 -11650745 - L3 LINE CR1 -256 1321 1229 2255 115 0 16 chr10 128666469 128666783 -11649982 - AluSq SINE Alu -4 309 1 452 337 59 20 chr10 128666877 128667079 -11649686 - MIR SINE MIR -1 261 52 1107 181 231 39 chr10 128667241 128667600 -11649165 + MSTC LTR MaLR 1 428 0 2223 153 75 18 chr10 128667733 128668133 -11648632 - MSTB LTR MaLR -3 423 1 188 217 130 87 chr10 128668157 128668318 -11648447 - L2 LINE L2 -188 3084 2917 273 220 174 28 chr10 128668636 128668745 -11648020 + L2 LINE L2 3169 3293 -20 321 377 34 7 chr10 128668883 128669029 -11647736 + MIR3 SINE MIR 39 188 -20 257 364 49 22 chr10 128670113 128670297 -11646468 + MIR SINE MIR 59 247 -15 277 277 139 0 chr10 128671203 128671304 -11645461 + MIR SINE MIR 34 148 -60 612 234 94 0 chr10 128671309 128671437 -11645328 - MER5A DNA MER1_type -3 186 47 272 260 146 8 chr10 128671508 128671631 -11645134 - MLT1K LTR MaLR -341 247 108 202 316 89 25 chr10 128671851 128671930 -11644835 - L3b LINE CR1 -24 1559 1476 287 49 24 0 chr10 128672119 128672160 -11644605 + (ATG)n Simple_repeat Simple_repeat 3 44 0 535 332 118 17 chr10 128672482 128672720 -11644045 + MIR SINE MIR 1 262 0 290 354 135 26 chr10 128672736 128673550 -11643215 - L2 LINE L2 -8 3264 2369 198 103 0 0 chr10 128673993 128674022 -11642743 + (GA)n Simple_repeat Simple_repeat 2 30 0 520 320 38 14 chr10 128674597 128674888 -11641877 - MER102b DNA MER1_type 0 341 44 335 298 54 30 chr10 128675004 128675172 -11641593 + MIR3 SINE MIR 31 202 -6 289 260 32 69 chr10 128675407 128675563 -11641202 - MIR SINE MIR -65 143 42 289 271 40 73 chr10 128676298 128676449 -11640316 - MIR SINE MIR -80 182 37 432 97 0 0 chr10 128676686 128676748 -11640017 + (GGGA)n Simple_repeat Simple_repeat 1 62 0 1346 188 53 71 chr10 128676756 128677134 -11639631 + MLT1B LTR MaLR 4 374 -16 2102 126 3 7 chr10 128677423 128677717 -11639048 - AluSx SINE Alu -19 293 1 205 371 22 22 chr10 128677962 128678051 -11638714 + MIR SINE MIR 32 120 -142 1566 208 69 38 chr10 128678311 128678758 -11638007 + MLT1C LTR MaLR 5 465 -2 1701 144 55 81 chr10 128679405 128679787 -11636978 - THE1C LTR MaLR -3 372 1 2345 86 3 3 chr10 128681317 128681619 -11635146 - AluSc SINE Alu -7 302 1 2249 116 0 0 chr10 128681619 128681910 -11634855 - AluSc SINE Alu -17 292 1 192 77 0 0 chr10 128681912 128681938 -11634827 + (T)n Simple_repeat Simple_repeat 1 26 0 769 199 0 0 chr10 128681939 128682070 -11634695 - FLAM_A SINE Alu -1 132 2 1171 235 92 9 chr10 128682203 128682399 -11634366 - MER58B DNA MER1_type -2079 341 163 324 0 0 0 chr10 128682399 128682435 -11634330 + (TA)n Simple_repeat Simple_repeat 2 37 0 2531 61 7 0 chr10 128682435 128682729 -11634036 - AluY SINE Alu -3 308 13 1171 235 92 9 chr10 128682729 128682846 -11633919 - MER58B DNA MER1_type -2256 164 1 2338 94 0 3 chr10 128683569 128683866 -11632899 - AluSx SINE Alu -16 296 1 2070 148 0 6 chr10 128684056 128684367 -11632398 + AluJb SINE Alu 3 311 -1 284 264 82 9 chr10 128684581 128684691 -11632074 - MIR SINE MIR -21 241 124 2438 109 0 0 chr10 128684697 128685009 -11631756 - AluSq SINE Alu -1 312 1 534 123 0 12 chr10 128685207 128685288 -11631477 + AluSp/q SINE Alu 178 257 -56 3098 167 82 2 chr10 128686188 128686812 -11629953 + L1MB7 LINE L1 5447 6120 -64 28 48 0 0 chr10 128690057 128690099 -11626666 + AT_rich Low_complexity Low_complexity 1 42 0 1080 183 40 73 chr10 128691498 128691798 -11624967 + MER58B DNA MER1_type 52 341 0 207 0 0 0 chr10 128692022 128692045 -11624720 + (CA)n Simple_repeat Simple_repeat 2 24 0 2517 70 0 10 chr10 128692450 128692762 -11624003 - AluSg SINE Alu -1 309 1 2061 126 7 0 chr10 128693423 128693708 -11623057 - AluSx SINE Alu -11 301 15 24 0 0 0 chr10 128694885 128694909 -11621856 + AT_rich Low_complexity Low_complexity 1 24 0 256 259 59 0 chr10 128696931 128697016 -11619749 + MIR SINE MIR 111 200 -62 2113 129 0 14 chr10 128697074 128697369 -11619396 - AluSc SINE Alu -18 291 1 2413 115 0 0 chr10 128698884 128699196 -11617569 + AluSx SINE Alu 1 312 0 2428 100 0 3 chr10 128699686 128699997 -11616768 - AluSq SINE Alu -3 310 1 2473 90 3 3 chr10 128700775 128701086 -11615679 - AluSq SINE Alu -2 311 1 267 271 57 0 chr10 128702121 128702191 -11614574 - MIR SINE MIR -72 190 117 2209 107 0 0 chr10 128702211 128702511 -11614254 + AluY SINE Alu 1 300 -11 2030 123 30 17 chr10 128702519 128702819 -11613946 + AluSx SINE Alu 1 304 -8 219 146 0 0 chr10 128703016 128703057 -11613708 + (CA)n Simple_repeat Simple_repeat 2 42 0 199 244 90 39 chr10 128703057 128703135 -11613630 + L2 LINE L2 3154 3235 -37 306 325 17 8 chr10 128703720 128703840 -11612925 + MIR SINE MIR 118 238 -24 509 310 119 48 chr10 128704110 128704688 -11612077 + L2 LINE L2 1985 2603 -711 234 306 56 19 chr10 128704932 128705040 -11611725 + L2 LINE L2 3202 3313 0 398 264 129 59 chr10 128705364 128705735 -11611030 - L1MC4 LINE L1 -141 7901 7505 916 164 0 76 chr10 128705955 128706126 -11610639 + AluJb SINE Alu 101 258 -54 2234 141 0 0 chr10 128707471 128707783 -11608982 + AluSx SINE Alu 1 312 0 446 246 67 39 chr10 128708111 128708290 -11608475 - L1ME3A LINE L1 -342 5828 5645 1024 202 19 5 chr10 128708295 128708508 -11608257 + MER58A DNA MER1_type 3 218 -6 295 343 105 7 chr10 128709317 128709460 -11607305 - MIR3 SINE MIR -4 204 48 186 133 0 0 chr10 128712982 128713012 -11603753 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 288 336 64 0 chr10 128713667 128713792 -11602973 - MIR3 SINE MIR -49 159 27 2169 96 3 3 chr10 128716699 128717000 -11599765 + AluSx SINE Alu 1 301 -11 301 346 23 15 chr10 128717367 128717497 -11599268 + HAL1 LINE L1 2367 2497 -10 644 273 16 75 chr10 128717796 128717929 -11598836 + MIR SINE MIR 20 133 -129 2074 116 0 0 chr10 128717929 128718222 -11598543 + AluSx SINE Alu 1 293 -19 644 273 16 75 chr10 128718222 128718341 -11598424 + MIR SINE MIR 133 257 -5 1171 208 86 34 chr10 128718472 128718799 -11597966 - MER2 DNA MER2_type 0 344 1 1980 110 50 7 chr10 128720106 128720406 -11596359 - AluSq SINE Alu 0 313 1 333 0 0 0 chr10 128721402 128721439 -11595326 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1901 133 0 11 chr10 128721442 128721728 -11595037 - AluSx SINE Alu -29 283 1 586 186 0 40 chr10 128723146 128723298 -11593467 - FLAM_A SINE Alu 0 142 20 2110 118 0 13 chr10 128723491 128723797 -11592968 - AluSq SINE Alu -11 302 1 339 244 87 31 chr10 128724641 128724768 -11591997 - MER5A DNA MER1_type -6 183 50 * 419 245 48 48 chr10 128724661 128724808 -11591957 + MER5A DNA MER1_type 43 189 0 5857 60 1 1 chr10 128728518 128729270 -11587495 + L1P LINE L1 4296 5047 -1099 420 212 79 42 chr10 128729393 128729558 -11587207 - Tigger5 DNA MER2_type 0 2323 2153 1529 193 0 99 chr10 128730169 128730593 -11586172 - MLT1B LTR MaLR -4 386 5 180 0 0 0 chr10 128733008 128733028 -11583737 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 231 286 0 36 chr10 128733150 128733234 -11583531 - MIR SINE MIR -50 212 132 1833 164 0 0 chr10 128734195 128734493 -11582272 - AluJb SINE Alu -14 298 1 3853 168 54 46 chr10 128735014 128735820 -11580945 + L1MB1 LINE L1 5305 6120 -74 1677 159 10 23 chr10 128735820 128736121 -11580644 + AluJo SINE Alu 1 297 -15 3853 168 54 46 chr10 128736121 128736197 -11580568 + L1MB1 LINE L1 6120 6194 0 414 0 0 0 chr10 128737652 128737698 -11579067 + (CA)n Simple_repeat Simple_repeat 2 47 0 222 37 0 0 chr10 128739171 128739198 -11577567 + (GA)n Simple_repeat Simple_repeat 1 27 0 698 179 0 7 chr10 128741004 128741144 -11575621 + L1MB4 LINE L1 6036 6174 -6 387 326 58 50 chr10 128741763 128742005 -11574760 + L1MC4a LINE L1 5616 5859 -1949 1134 140 0 6 chr10 128742479 128742657 -11574108 - AluSg/x SINE Alu -14 298 122 2145 110 0 3 chr10 128742659 128742960 -11573805 - AluSx SINE Alu -12 300 1 1943 132 3 0 chr10 128743891 128744178 -11572587 + AluSx SINE Alu 1 288 -24 382 286 58 29 chr10 128745179 128745325 -11571440 - MIR SINE MIR -52 156 34 2001 128 0 3 chr10 128746657 128746946 -11569819 + AluSx SINE Alu 1 288 -24 191 259 19 19 chr10 128747400 128747454 -11569311 + MIR SINE MIR 96 149 -59 2344 82 0 0 chr10 128747642 128747947 -11568818 - AluSg SINE Alu -5 305 1 2152 110 3 0 chr10 128747947 128748245 -11568520 - AluSq SINE Alu -13 300 1 1015 229 14 101 chr10 128748428 128748855 -11567910 + MLT1B LTR MaLR 1 390 0 336 250 38 0 chr10 128748867 128748947 -11567818 - MIR SINE MIR -95 167 85 333 247 0 35 chr10 128752679 128752764 -11564001 - MIR SINE MIR -6 256 175 278 279 81 72 chr10 128754302 128754524 -11562241 - L3 LINE CR1 -368 1209 986 704 318 29 21 chr10 128755168 128755552 -11561213 + L1ME4a LINE L1 5346 5732 -438 359 303 86 48 chr10 128755627 128755917 -11560848 + L1ME4a LINE L1 5777 6077 -44 2225 112 0 0 chr10 128756781 128757085 -11559680 + AluSx SINE Alu 2 305 -7 2939 147 48 14 chr10 128757540 128757718 -11559047 + L1MB4 LINE L1 5601 5771 -409 2204 97 7 0 chr10 128757718 128758016 -11558749 + AluSg SINE Alu 1 300 -10 2939 147 48 14 chr10 128758016 128758395 -11558370 + L1MB4 LINE L1 5771 6177 -3 1694 187 0 0 chr10 128758413 128758712 -11558053 + AluJb SINE Alu 1 299 -13 343 315 158 18 chr10 128758880 128759102 -11557663 + MIR SINE MIR 8 260 -2 25 0 0 0 chr10 128759732 128759757 -11557008 + AT_rich Low_complexity Low_complexity 1 25 0 381 261 52 9 chr10 128759806 128759921 -11556844 - MIR3 SINE MIR -2 206 87 2034 125 3 0 chr10 128760397 128760700 -11556065 + AluSq SINE Alu 1 304 -9 1552 183 23 7 chr10 128760846 128761146 -11555619 - AluJo SINE Alu -7 305 1 306 0 0 0 chr10 128761700 128761734 -11555031 + (T)n Simple_repeat Simple_repeat 1 34 0 1013 254 88 42 chr10 128762926 128763439 -11553326 + MLT1F1 LTR MaLR 15 565 -2 377 267 69 38 chr10 128763734 128763865 -11552900 + L2 LINE L2 3137 3271 -1 2232 102 0 16 chr10 128764393 128764707 -11552058 + AluSc SINE Alu 1 309 0 23 0 0 0 chr10 128765513 128765536 -11551229 + AT_rich Low_complexity Low_complexity 1 23 0 708 286 24 12 chr10 128765787 128766042 -11550723 - MIR SINE MIR -3 259 2 2347 53 0 98 chr10 128767788 128768125 -11548640 - AluY SINE Alu -7 304 1 2204 93 4 0 chr10 128768546 128768826 -11547939 + AluSq SINE Alu 1 281 -32 288 0 0 0 chr10 128768826 128768858 -11547907 + (CAAT)n Simple_repeat Simple_repeat 4 35 0 198 360 13 0 chr10 128768997 128769072 -11547693 + MIR3 SINE MIR 131 206 -2 423 56 0 0 chr10 128769557 128769611 -11547154 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 226 237 119 0 chr10 128769622 128769681 -11547084 + MIR3 SINE MIR 128 193 -15 342 0 0 0 chr10 128769851 128769889 -11546876 + (TC)n Simple_repeat Simple_repeat 2 39 0 427 225 148 39 chr10 128769930 128770112 -11546653 - MIR3 SINE MIR 0 208 7 1694 184 3 0 chr10 128770765 128771048 -11545717 - AluJo SINE Alu -14 298 15 2178 75 68 0 chr10 128772058 128772338 -11544427 - AluSg SINE Alu -8 302 4 207 100 0 0 chr10 128772558 128772588 -11544177 + (A)n Simple_repeat Simple_repeat 1 30 0 2612 58 0 3 chr10 128773787 128774096 -11542669 + AluY SINE Alu 1 308 -3 748 166 0 3 chr10 128774280 128774431 -11542334 - MER5A DNA MER1_type 0 189 1 2488 70 3 3 chr10 128774597 128774899 -11541866 + AluSp SINE Alu 1 302 -11 3806 167 24 5 chr10 128774902 128775735 -11541030 + L1MC1 LINE L1 4890 5749 -584 2112 131 0 16 chr10 128775735 128776040 -11540725 - AluSx SINE Alu -12 300 1 3806 167 24 5 chr10 128776040 128776215 -11540550 + L1MC1 LINE L1 5749 5919 -414 1090 165 26 0 chr10 128776216 128776410 -11540355 + L1MC1 LINE L1 6124 6322 -11 1129 89 0 0 chr10 128776413 128776548 -11540217 + AluSq/x SINE Alu 2 136 -176 2180 121 0 0 chr10 128776548 128776837 -11539928 + AluSg SINE Alu 1 289 -21 584 240 115 42 chr10 128777059 128777251 -11539514 - MIR SINE MIR -37 225 20 622 169 196 48 chr10 128777404 128777593 -11539172 - MER20 DNA MER1_type -2 217 1 555 334 47 33 chr10 128780906 128781142 -11535623 - L2 LINE L2 -6 3307 3065 966 213 46 9 chr10 128781142 128781358 -11535407 + MER58A DNA MER1_type 1 224 0 555 334 47 33 chr10 128781358 128781420 -11535345 - L2 LINE L2 -248 3065 3005 213 311 67 0 chr10 128781649 128781739 -11535026 - MIR3 SINE MIR 0 208 113 2393 93 3 7 chr10 128782664 128782974 -11533791 - AluSg SINE Alu -1 309 1 2390 75 0 23 chr10 128784440 128784748 -11532017 - AluY SINE Alu -10 301 1 1329 86 24 53 chr10 128784748 128784957 -11531808 - AluSg/x SINE Alu -6 306 104 1389 103 0 0 chr10 128785060 128785235 -11531530 - AluSq SINE Alu -138 175 1 530 179 19 0 chr10 128785235 128785341 -11531424 - L1MB3 LINE L1 -41 6142 6035 325 176 88 0 chr10 128785357 128785425 -11531340 - MIR SINE MIR -89 173 100 2213 90 36 0 chr10 128785453 128785732 -11531033 + AluSx SINE Alu 1 289 -23 341 91 0 18 chr10 128785732 128785787 -11530978 + (GGGA)n Simple_repeat Simple_repeat 2 55 0 740 226 25 25 chr10 128785903 128786107 -11530658 - MER58B DNA MER1_type 0 341 138 1202 180 22 71 chr10 128786107 128786430 -11530335 - L1MB3 LINE L1 -10 6173 5867 610 245 6 13 chr10 128786432 128786591 -11530174 - MER58B DNA MER1_type -183 158 1 247 333 11 21 chr10 128786637 128786730 -11530035 - MIR SINE MIR -89 119 28 2284 118 0 0 chr10 128787574 128787880 -11528885 + AluSx SINE Alu 1 306 -6 2238 115 3 10 chr10 128787881 128788193 -11528572 + AluSg SINE Alu 1 310 0 192 309 173 27 chr10 128788313 128788423 -11528342 - L2 LINE L2 -43 3229 3104 399 279 98 36 chr10 128789347 128790074 -11526691 + L1MC4a LINE L1 5325 6103 -18 21 0 0 0 chr10 128790088 128790109 -11526656 + AT_rich Low_complexity Low_complexity 1 21 0 1913 71 3 89 chr10 128790278 128790560 -11526205 - AluSc SINE Alu -51 258 1 23 0 0 0 chr10 128790679 128790702 -11526063 + AT_rich Low_complexity Low_complexity 1 23 0 371 18 35 0 chr10 128790703 128790760 -11526005 + L1MA5 LINE L1 6241 6299 -1 2276 126 0 0 chr10 128790770 128791080 -11525685 + AluSx SINE Alu 2 311 -1 300 257 147 0 chr10 128791114 128791223 -11525542 - HAL1b LINE L1 -29 1319 1195 235 272 62 12 chr10 128791259 128791340 -11525425 + L2 LINE L2 3227 3311 -2 268 260 74 77 chr10 128791349 128791487 -11525278 - HAL1b LINE L1 -212 1136 999 961 195 130 68 chr10 128791487 128791587 -11525178 - MER2 DNA MER2_type 0 344 252 1750 139 37 30 chr10 128791587 128791882 -11524883 + AluJb SINE Alu 1 297 -15 961 195 130 68 chr10 128791882 128792104 -11524661 - MER2 DNA MER2_type -92 252 2 268 260 74 77 chr10 128792104 128792277 -11524488 - HAL1b LINE L1 -349 999 826 1546 120 70 12 chr10 128792314 128792555 -11524210 - AluSx SINE Alu -1 311 57 428 134 42 106 chr10 128793145 128793287 -11523478 - AluSg SINE Alu -176 134 2 200 265 0 0 chr10 128793303 128793352 -11523413 + MIR SINE MIR 166 214 -48 246 175 18 0 chr10 128793352 128793409 -11523356 + T-rich Low_complexity Low_complexity 1 58 0 1647 104 159 19 chr10 128793411 128793681 -11523084 - AluSg1 SINE Alu 0 309 2 2111 148 0 3 chr10 128793690 128794001 -11522764 - AluJo SINE Alu -2 310 1 1005 180 23 47 chr10 128794089 128794271 -11522494 + MER44D DNA MER2_type 1 186 -2305 2398 81 0 7 chr10 128794271 128794569 -11522196 - AluSg SINE Alu -14 296 1 1005 180 23 47 chr10 128794569 128794642 -11522123 + MER44D DNA MER2_type 186 520 -89 296 275 101 43 chr10 128795095 128795233 -11521532 - MIR3 SINE MIR -47 161 29 2348 99 0 31 chr10 128795333 128795656 -11521109 - AluSq SINE Alu 0 313 1 416 256 55 78 chr10 128796163 128796507 -11520258 + L1MC4 LINE L1 7707 8042 0 226 386 0 11 chr10 128796727 128796815 -11519950 + MIR SINE MIR 19 105 -103 839 209 50 15 chr10 128797333 128797534 -11519231 - MER3 DNA MER1_type 0 209 2 2241 107 0 3 chr10 128797782 128798081 -11518684 + AluSx SINE Alu 1 298 -14 2283 90 20 0 chr10 128798774 128799073 -11517692 + AluSx SINE Alu 2 306 -6 1606 116 0 5 chr10 128799986 128800202 -11516563 - AluSg SINE Alu -91 219 5 424 276 86 18 chr10 128800448 128800611 -11516154 - MIR SINE MIR -8 254 81 278 331 127 6 chr10 128800877 128801043 -11515722 + MIR SINE MIR 77 262 0 271 326 21 90 chr10 128801075 128801219 -11515546 + MIR SINE MIR 31 164 -98 729 184 15 87 chr10 128801540 128801736 -11515029 + MER53 DNA DNA 5 186 -3 180 282 0 42 chr10 128801984 128802055 -11514710 - L3 LINE CR1 -304 1273 1206 2125 123 7 0 chr10 128802537 128803020 -11513745 - AluSx SINE Alu 0 489 5 1886 218 168 15 chr10 128803393 128803934 -11512831 - MLT1E2 LTR MaLR -2 624 1 560 247 39 11 chr10 128803981 128804159 -11512606 - MLT1C LTR MaLR -28 439 257 201 75 0 192 chr10 128804190 128804336 -11512429 + (TCCC)n Simple_repeat Simple_repeat 4 121 0 667 184 106 11 chr10 128804344 128804523 -11512242 - MLT1C LTR MaLR -186 281 86 1845 121 18 29 chr10 128804524 128804804 -11511961 - AluSx SINE Alu 0 312 36 2468 91 0 3 chr10 128804814 128805158 -11511607 - AluSg SINE Alu 0 343 1 234 0 0 0 chr10 128806064 128806090 -11510675 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 180 364 68 25 chr10 128806354 128806516 -11510249 + L2 LINE L2 3104 3272 0 214 311 83 53 chr10 128807498 128807630 -11509135 - L2 LINE L2 0 3272 3137 225 291 0 0 chr10 128807795 128807881 -11508884 + GA-rich Low_complexity Low_complexity 2 87 0 520 192 96 0 chr10 128808477 128808581 -11508184 - MER81 DNA DNA 0 114 1 294 286 175 15 chr10 128808644 128808850 -11507915 + LTR16A LTR ERVL 206 444 -6 1219 281 66 24 chr10 128809636 128810135 -11506630 - MLT1G1 LTR MaLR -1 594 75 2391 100 3 0 chr10 128810693 128810994 -11505771 + AluSx SINE Alu 1 302 -10 241 196 43 0 chr10 128811632 128811678 -11505087 - L2 LINE L2 0 3272 3225 2290 97 3 3 chr10 128811826 128812126 -11504639 + AluSq SINE Alu 1 300 -13 255 260 142 24 chr10 128812462 128812589 -11504176 + MIR3 SINE MIR 1 142 -66 420 311 79 11 chr10 128813447 128813637 -11503128 - L2 LINE L2 -13 3300 3098 379 209 217 9 chr10 128813719 128813834 -11502931 - MER5A DNA MER1_type -9 180 42 2208 128 0 0 chr10 128814606 128814904 -11501861 + AluSq SINE Alu 1 298 -15 2407 86 0 0 chr10 128814909 128815199 -11501566 + AluSc SINE Alu 3 292 -17 202 211 0 0 chr10 128815900 128815938 -11500827 + L2 LINE L2 3234 3271 -1 314 211 26 97 chr10 128816140 128816214 -11500551 + MER94 DNA DNA 2 67 -67 2207 113 10 3 chr10 128816214 128816507 -11500258 + AluSx SINE Alu 1 295 -17 314 211 26 97 chr10 128816507 128816546 -11500219 + MER94 DNA DNA 67 107 -27 283 312 73 9 chr10 128816586 128816695 -11500070 - MIR3 SINE MIR -28 180 65 185 235 24 118 chr10 128816834 128816919 -11499846 - MIR SINE MIR -115 147 71 2226 97 7 19 chr10 128816980 128817288 -11499477 - AluSx SINE Alu -8 304 1 2172 117 0 23 chr10 128817477 128817785 -11498980 - AluSx SINE Alu -11 301 1 194 200 36 36 chr10 128817841 128817896 -11498869 + L2 LINE L2 3211 3265 -7 945 209 24 29 chr10 128818184 128818390 -11498375 - MER63A DNA MER1_type -5 205 1 262 301 0 27 chr10 128820007 128820080 -11496685 - MIR SINE MIR -12 250 180 369 146 12 0 chr10 128820118 128820190 -11496575 - Alu SINE Alu -4 298 237 2180 125 3 0 chr10 128820824 128821128 -11495637 + AluSp SINE Alu 1 305 -8 1562 171 20 49 chr10 128821194 128821498 -11495267 + AluJo SINE Alu 1 295 -17 2062 131 16 7 chr10 128821503 128821809 -11494956 + AluSq SINE Alu 3 311 -2 258 204 36 42 chr10 128822687 128822854 -11493911 + GA-rich Low_complexity Low_complexity 1 166 0 2191 119 0 7 chr10 128823409 128823731 -11493034 + AluSx SINE Alu 1 312 0 2451 81 3 3 chr10 128824735 128825045 -11491720 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 128825045 128825066 -11491699 + AT_rich Low_complexity Low_complexity 1 21 0 2289 73 3 7 chr10 128825066 128825373 -11491392 + AluSp SINE Alu 1 306 0 2424 105 0 0 chr10 128826015 128826321 -11490444 + AluSx SINE Alu 1 306 -6 189 0 0 0 chr10 128826321 128826342 -11490423 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 261 0 0 0 chr10 128826341 128826370 -11490395 + (GA)n Simple_repeat Simple_repeat 2 30 0 211 241 0 19 chr10 128826398 128826505 -11490260 + MIR SINE MIR 63 232 -30 483 240 77 77 chr10 128827704 128827790 -11488975 - MER5A DNA MER1_type 0 189 104 2194 132 0 0 chr10 128827790 128828093 -11488672 + AluSq SINE Alu 1 303 -10 483 240 77 77 chr10 128828093 128828189 -11488576 - MER5A DNA MER1_type -84 105 7 1555 162 3 70 chr10 128830622 128830949 -11485816 + AluJo SINE Alu 4 308 -4 2179 123 3 7 chr10 128831082 128831392 -11485373 - AluSg SINE Alu -1 309 1 276 192 77 26 chr10 128831445 128831523 -11485242 + L2 LINE L2 3232 3313 0 2195 95 40 7 chr10 128831675 128831971 -11484794 + AluSx SINE Alu 1 306 -6 376 336 107 12 chr10 128832987 128833177 -11483588 + MIR SINE MIR 45 254 -8 249 33 0 0 chr10 128833183 128833213 -11483552 + (CAT)n Simple_repeat Simple_repeat 2 31 0 231 141 21 92 chr10 128833492 128833634 -11483131 + (CACCC)n Simple_repeat Simple_repeat 1 132 0 223 156 32 86 chr10 128833726 128833912 -11482853 + (CACCC)n Simple_repeat Simple_repeat 2 177 0 504 198 0 83 chr10 128833924 128834116 -11482649 + (CACCC)n Simple_repeat Simple_repeat 2 177 0 482 271 181 20 chr10 128834606 128834810 -11481955 - MIR SINE MIR -6 256 16 6244 84 23 10 chr10 128836092 128837579 -11479186 + L1PA14 LINE L1 4675 6161 0 1331 142 119 85 chr10 128837804 128838099 -11478666 + AluJo SINE Alu 1 305 -7 201 22 89 44 chr10 128839807 128839852 -11476913 + (ATATG)n Simple_repeat Simple_repeat 2 48 0 252 167 0 0 chr10 128840125 128840173 -11476592 + (CACG)n Simple_repeat Simple_repeat 4 51 0 198 0 0 0 chr10 128840174 128840196 -11476569 + (TC)n Simple_repeat Simple_repeat 2 23 0 189 312 13 26 chr10 128840576 128840653 -11476112 - MIR SINE MIR -22 240 165 256 279 58 0 chr10 128840704 128840790 -11475975 - MIR3 SINE MIR -30 178 88 270 202 46 9 chr10 128844580 128844689 -11472076 + (TG)n Simple_repeat Simple_repeat 1 113 0 2099 115 11 3 chr10 128848066 128848353 -11468412 - AluSx SINE Alu -10 302 14 1065 239 130 49 chr10 128848358 128848965 -11467800 - HAL1b LINE L1 -677 671 16 1784 147 19 45 chr10 128848968 128849280 -11467485 - AluSx SINE Alu -8 304 1 759 200 0 0 chr10 128849588 128849713 -11467052 - FLAM_A SINE Alu -8 125 1 458 33 17 0 chr10 128850288 128850348 -11466417 + (TTTTC)n Simple_repeat Simple_repeat 1 61 0 1836 149 0 14 chr10 128850349 128850631 -11466134 - AluJo SINE Alu -34 278 1 317 127 0 18 chr10 128851306 128851361 -11465404 - LTR67 LTR ERVL -10 547 494 524 235 0 0 chr10 128852075 128852177 -11464588 + MER5A DNA MER1_type 8 109 -80 244 345 20 20 chr10 128852258 128852406 -11464359 + L1MC5 LINE L1 7081 7228 -733 411 274 78 17 chr10 128852529 128852993 -11463772 + L1MC5 LINE L1 7268 7785 -176 26 30 0 0 chr10 128853291 128853324 -11463441 + GC_rich Low_complexity Low_complexity 1 33 0 21 82 0 0 chr10 128853392 128853441 -11463324 + GC_rich Low_complexity Low_complexity 1 49 0 198 91 0 0 chr10 128853467 128853500 -11463265 + (CCG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 128853572 128853596 -11463169 + GC_rich Low_complexity Low_complexity 1 24 0 470 260 136 10 chr10 128853988 128854181 -11462584 - MIR SINE MIR -3 259 44 2166 120 0 0 chr10 128856658 128856957 -11459808 + AluSx SINE Alu 1 299 -13 2245 99 3 0 chr10 128856957 128857264 -11459501 + AluSp SINE Alu 1 308 0 471 217 0 140 chr10 128857264 128857356 -11459409 + MIR SINE MIR 80 143 -119 2407 92 0 3 chr10 128857356 128857660 -11459105 - AluSg SINE Alu -7 303 1 471 217 0 140 chr10 128857660 128857724 -11459041 + MIR SINE MIR 143 214 -48 1647 104 159 19 chr10 128857724 128858053 -11458712 - AluSg1 SINE Alu 0 368 2 2096 151 0 3 chr10 128858062 128858373 -11458392 - AluJo SINE Alu -2 310 1 1005 180 23 47 chr10 128858461 128858643 -11458122 + MER44D DNA MER2_type 1 186 -2305 2378 81 0 7 chr10 128858643 128858939 -11457826 - AluSg SINE Alu -16 294 1 1005 180 23 47 chr10 128858939 128859012 -11457753 + MER44D DNA MER2_type 186 520 -89 296 275 101 43 chr10 128859465 128859603 -11457162 - MIR3 SINE MIR -47 161 29 1390 98 0 49 chr10 128859706 128859909 -11456856 - AluSq SINE Alu -2 311 119 963 94 0 0 chr10 128865936 128866063 -11450702 - AluSq SINE Alu -185 127 1 475 230 67 90 chr10 128866569 128866913 -11449852 + L1MC4 LINE L1 7707 8042 0 222 386 0 11 chr10 128867133 128867221 -11449544 + MIR SINE MIR 19 105 -103 826 209 50 15 chr10 128867739 128867940 -11448825 - MER3 DNA MER1_type 0 209 2 1922 111 4 4 chr10 128868188 128868467 -11448298 + AluSx SINE Alu 1 279 -33 809 106 0 0 chr10 128868567 128868671 -11448094 - AluSc SINE Alu -204 105 2 804 233 63 0 chr10 128868673 128868832 -11447933 - AluJo/FRAM SINE Alu -15 297 129 350 214 0 0 chr10 128868833 128868889 -11447876 - AluJ/FLAM SINE Alu -245 57 2 203 258 197 0 chr10 128868890 128868956 -11447809 + MIR SINE MIR 108 186 -76 872 205 15 113 chr10 128869056 128869085 -11447680 - HsTC2 DNA Tc2 -90 1808 1778 828 246 70 76 chr10 128869085 128869226 -11447539 + MER58B DNA MER1_type 2 142 -2278 1760 154 0 32 chr10 128869226 128869538 -11447227 + AluJb SINE Alu 1 302 -10 828 246 70 76 chr10 128869538 128869737 -11447028 + MER58B DNA MER1_type 142 340 -1 872 205 15 113 chr10 128869737 128870034 -11446731 - HsTC2 DNA Tc2 -120 1778 1338 2557 132 9 32 chr10 128870036 128870500 -11446265 + L1PA13 LINE L1 5710 6162 -1 235 176 0 39 chr10 128870511 128870562 -11446203 - HsTC2 DNA Tc2 -544 1354 1306 23 0 0 0 chr10 128870921 128870944 -11445821 + AT_rich Low_complexity Low_complexity 1 23 0 319 19 93 0 chr10 128870945 128870999 -11445766 + L1MA5 LINE L1 6241 6299 -1 2129 123 0 0 chr10 128871009 128871319 -11445446 + AluSx SINE Alu 2 311 -1 237 247 74 25 chr10 128871498 128871579 -11445186 + L2 LINE L2 3227 3311 -2 334 232 87 101 chr10 128871588 128871726 -11445039 - HAL1b LINE L1 -212 1136 1001 500 203 0 0 chr10 128871726 128871805 -11444960 - MER2 DNA MER2_type 0 345 267 957 151 46 77 chr10 128871826 128872111 -11444654 + AluJb SINE Alu 1 276 -36 562 280 86 43 chr10 128872426 128872776 -11443989 + L2 LINE L2 2907 3271 -1 195 171 0 0 chr10 128872821 128872856 -11443909 - L2 LINE L2 -1 3271 3237 1391 214 91 27 chr10 128872863 128873270 -11443495 + Charlie4a DNA MER1_type 7 439 -69 4315 123 7 10 chr10 128873272 128874177 -11442588 + L1PB1 LINE L1 4955 5859 -292 590 115 21 0 chr10 128874335 128874431 -11442334 + AluSc SINE Alu 211 308 -1 1733 164 0 19 chr10 128874575 128874887 -11441878 + AluJo SINE Alu 1 306 -6 317 301 32 11 chr10 128874901 128874994 -11441771 - MIR SINE MIR -51 211 117 195 171 49 0 chr10 128875057 128875098 -11441667 + MER5A DNA MER1_type 126 168 -21 520 223 36 9 chr10 128875488 128875600 -11441165 - MIR SINE MIR -14 248 134 1218 86 91 154 chr10 128875912 128876211 -11440554 + L1PB2 LINE L1 5875 6151 0 389 188 14 0 chr10 128876213 128876282 -11440483 + Charlie4a DNA MER1_type 423 492 -16 936 256 50 36 chr10 128876282 128876645 -11440120 - L2 LINE L2 -41 3272 2905 357 281 0 0 chr10 128877935 128878017 -11438748 - L2 LINE L2 -9 3304 3223 1725 150 0 14 chr10 128878181 128878365 -11438400 - AluJb SINE Alu 0 317 137 1970 142 0 3 chr10 128878365 128878675 -11438090 - AluSx SINE Alu -3 309 1 1725 150 0 14 chr10 128878675 128878811 -11437954 - AluJb SINE Alu -180 137 1 273 328 38 23 chr10 128878811 128878942 -11437823 - L2 LINE L2 -108 3205 3073 2113 96 3 7 chr10 128878979 128879271 -11437494 + AluSx SINE Alu 1 291 -21 981 209 46 38 chr10 128879320 128879583 -11437182 + MLT1B LTR MaLR 1 265 -125 275 274 57 38 chr10 128879919 128880025 -11436740 - L2 LINE L2 0 3313 3206 523 167 2 3 chr10 128880273 128880365 -11436400 + MLT1B LTR MaLR 258 336 -54 211 225 0 0 chr10 128881028 128881068 -11435697 + MIR SINE MIR 221 260 -2 196 316 70 0 chr10 128882079 128882136 -11434629 + MIR SINE MIR 37 97 -165 2323 94 0 0 chr10 128882167 128882476 -11434289 - AluSc SINE Alu 0 309 1 442 270 158 7 chr10 128883640 128883792 -11432973 + MER5A DNA MER1_type 14 188 -1 473 189 99 0 chr10 128884884 128884995 -11431770 + L1MB5 LINE L1 5767 5888 -286 2152 96 0 0 chr10 128884995 128885275 -11431490 + AluSx SINE Alu 1 280 -32 597 139 0 0 chr10 128885277 128885385 -11431380 + (GGAA)n Simple_repeat Simple_repeat 3 110 0 1149 198 17 24 chr10 128885388 128885681 -11431084 + L1MB5 LINE L1 5878 6168 -6 346 262 16 49 chr10 128885882 128886004 -11430761 + MIR SINE MIR 73 190 -72 362 238 59 10 chr10 128886221 128886322 -11430443 - L2 LINE L2 -2 3311 3206 780 137 0 0 chr10 128886868 128887007 -11429758 + (TCCA)n Simple_repeat Simple_repeat 2 140 0 289 325 60 10 chr10 128887027 128887166 -11429599 - L2 LINE L2 0 3313 3127 1418 287 101 44 chr10 128887366 128888021 -11428744 + MER115 DNA AcHobo 1 692 -1 953 237 115 47 chr10 128888052 128888438 -11428327 + L1MC4 LINE L1 7501 8042 0 597 236 14 28 chr10 128888610 128888754 -11428011 - MIR SINE MIR -40 222 81 594 259 54 0 chr10 128888818 128888965 -11427800 - MIR SINE MIR -5 257 103 208 345 156 35 chr10 128889151 128889672 -11427093 + L3 LINE CR1 497 1080 -497 659 106 0 21 chr10 128889719 128889813 -11426952 + MLT1B LTR MaLR 1 92 -298 1975 131 0 13 chr10 128889813 128890127 -11426638 - AluSx SINE Alu -1 311 2 1140 199 84 12 chr10 128890129 128890932 -11425833 - L1M4 LINE L1 -1103 5043 4130 23 0 0 0 chr10 128891024 128891047 -11425718 + AT_rich Low_complexity Low_complexity 1 23 0 5830 219 54 42 chr10 128891545 128893120 -11423645 + L1MC4 LINE L1 6450 8042 0 2282 115 42 20 chr10 128893126 128893482 -11423283 - THE1B LTR MaLR 0 364 1 6432 111 9 6 chr10 128893482 128894381 -11422384 - THE1B-int LTR MaLR 0 1580 679 515 202 21 0 chr10 128894520 128894614 -11422151 + FLAM_A SINE Alu 27 122 -20 865 221 6 0 chr10 128896586 128896767 -11419998 - L1MD2 LINE L1 -12 6347 6166 1400 143 0 13 chr10 128897155 128897379 -11419386 + AluSx SINE Alu 1 221 -91 509 283 14 0 chr10 128897436 128897574 -11419191 + MIR SINE MIR 113 252 -10 2532 193 19 36 chr10 128898407 128898987 -11417778 - L1MB4 LINE L1 0 6180 5611 192 224 119 0 chr10 128899534 128899601 -11417164 + MIR SINE MIR 178 252 -10 188 232 143 0 chr10 128899628 128899684 -11417081 - L2 LINE L2 -64 3249 3186 322 288 45 15 chr10 128899841 128899973 -11416792 - MER5A DNA MER1_type -19 170 35 1363 183 11 19 chr10 128900147 128900415 -11416350 + L1MB5 LINE L1 5801 6066 -108 1797 140 0 0 chr10 128900415 128900687 -11416078 + AluSx SINE Alu 1 272 -40 575 217 0 0 chr10 128900719 128900839 -11415926 + L1MB4 LINE L1 6055 6174 -6 189 351 0 0 chr10 128902163 128902220 -11414545 + L2 LINE L2 3207 3263 -9 240 35 0 0 chr10 128902226 128902255 -11414510 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 1551 135 23 0 chr10 128903943 128904203 -11412562 + L1MA2 LINE L1 6039 6304 0 22 0 0 0 chr10 128904203 128904225 -11412540 + AT_rich Low_complexity Low_complexity 1 22 0 1599 169 47 0 chr10 128905549 128905827 -11410938 - AluJo SINE Alu -21 291 1 2416 79 0 0 chr10 128905956 128906261 -11410504 - AluSq SINE Alu -8 305 1 1870 122 0 58 chr10 128907639 128907967 -11408798 + AluJo SINE Alu 1 309 -3 219 352 23 16 chr10 128908147 128908275 -11408490 + MIR SINE MIR 84 212 -50 256 286 71 31 chr10 128909979 128910077 -11406688 - MIR3 SINE MIR -26 182 81 923 273 77 40 chr10 128910110 128910462 -11406303 + MLT1G1 LTR MaLR 224 588 -7 344 283 33 72 chr10 128910505 128910657 -11406108 + L2 LINE L2 3127 3272 0 720 256 64 15 chr10 128910929 128911132 -11405633 - MIR SINE MIR 0 262 50 1021 151 0 0 chr10 128912141 128912307 -11404458 + FRAM SINE Alu 8 173 -3 2259 94 0 0 chr10 128912307 128912606 -11404159 + AluSx SINE Alu 1 299 -13 302 304 15 44 chr10 128913158 128913293 -11403472 + MIR3 SINE MIR 33 163 -45 6595 52 0 12 chr10 128913627 128914441 -11402324 + L1PA7 LINE L1 5351 6154 0 1169 258 206 5 chr10 128914598 128914986 -11401779 + MLT1J LTR MaLR 36 501 -10 2214 100 7 7 chr10 128915063 128915364 -11401401 - AluSx SINE Alu -11 301 1 2380 70 0 3 chr10 128915848 128916152 -11400613 - AluY SINE Alu 0 303 1 192 40 0 0 chr10 128916793 128916818 -11399947 + (TG)n Simple_repeat Simple_repeat 1 25 0 252 59 0 0 chr10 128916821 128916855 -11399910 + (GA)n Simple_repeat Simple_repeat 1 34 0 448 321 54 8 chr10 128917035 128917275 -11399490 + L3b LINE CR1 1135 1385 -198 2029 150 6 38 chr10 128918532 128918879 -11397886 + MER1B DNA MER1_type 2 337 0 26 50 0 0 chr10 128919096 128919136 -11397629 + AT_rich Low_complexity Low_complexity 1 40 0 2301 104 0 3 chr10 128919218 128919516 -11397249 - AluSx SINE Alu -15 297 1 252 0 0 0 chr10 128919569 128919597 -11397168 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1627 216 0 3 chr10 128919991 128920274 -11396491 - AluJb SINE Alu -30 282 1 3293 167 13 13 chr10 128920870 128921426 -11395339 - MER41D LTR ERV1 -1 556 1 210 299 111 43 chr10 128921480 128921597 -11395168 + L2 LINE L2 3143 3267 -5 236 282 0 14 chr10 128921618 128921689 -11395076 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 2142 144 10 57 chr10 128922355 128922759 -11394006 - MLT1B LTR MaLR -3 387 3 668 276 42 32 chr10 128925604 128925732 -11391033 + MIR SINE MIR 18 150 -112 2529 74 0 3 chr10 128925732 128926041 -11390724 + AluSp SINE Alu 1 308 -5 668 276 42 32 chr10 128926041 128926129 -11390636 + MIR SINE MIR 150 236 -26 1982 116 3 34 chr10 128926251 128926543 -11390222 - AluSx SINE Alu -16 296 14 192 167 28 0 chr10 128926716 128926752 -11390013 - L2 LINE L2 -87 3185 3149 2213 121 0 28 chr10 128927192 128927514 -11389251 - AluSq SINE Alu 0 313 1 280 260 0 14 chr10 128927668 128927741 -11389024 + MER5A DNA MER1_type 2 73 -116 195 228 35 35 chr10 128928310 128928367 -11388398 + MER5A DNA MER1_type 128 184 -5 1116 235 61 61 chr10 128928404 128928749 -11388016 + MLT1J LTR MaLR 80 424 -87 270 289 23 16 chr10 128928979 128929107 -11387658 + L1MC4 LINE L1 6964 7092 -950 1177 219 193 44 chr10 128929118 128929594 -11387171 + L1MC5 LINE L1 6966 7512 -449 250 285 25 63 chr10 128929656 128929672 -11387093 + L1ME3A LINE L1 5955 5970 -200 2035 145 3 3 chr10 128929672 128929976 -11386789 + AluSx SINE Alu 9 312 0 250 285 25 63 chr10 128929976 128930117 -11386648 + L1ME3A LINE L1 5970 6106 -64 2364 95 65 19 chr10 128930201 128930570 -11386195 - MER4B LTR ERV1 -224 386 1 522 294 30 64 chr10 128930570 128930900 -11385865 - L1MC/D LINE L1 -2193 5615 5297 310 268 27 54 chr10 128931264 128931376 -11385389 + MIR3 SINE MIR 89 197 -11 180 0 0 0 chr10 128931797 128931817 -11384948 + (TG)n Simple_repeat Simple_repeat 2 21 0 2183 126 7 0 chr10 128931867 128932176 -11384589 - AluSq SINE Alu -2 311 1 2379 213 93 62 chr10 128932293 128933245 -11383520 + L1MC5 LINE L1 6931 7912 -49 2363 98 0 0 chr10 128933266 128933571 -11383194 + AluSg SINE Alu 6 310 0 584 147 31 78 chr10 128933591 128933720 -11383045 + FLAM_C SINE Alu 2 124 -19 342 0 0 0 chr10 128934014 128934052 -11382713 + (CA)n Simple_repeat Simple_repeat 2 39 0 2776 93 3 3 chr10 128934396 128934760 -11382005 - THE1B LTR MaLR 0 364 1 802 160 0 0 chr10 128935029 128935148 -11381617 - AluJb SINE Alu -193 119 1 286 160 117 64 chr10 128935350 128935444 -11381321 + L1MC4 LINE L1 7582 7774 -128 283 242 0 0 chr10 128935446 128935512 -11381253 + L1MC4 LINE L1 7971 8036 -6 396 0 0 0 chr10 128936394 128936438 -11380327 + (TG)n Simple_repeat Simple_repeat 2 45 0 1690 132 17 51 chr10 128936439 128936735 -11380030 - AluJb SINE Alu -26 286 1 290 264 130 21 chr10 128937669 128937822 -11378943 + L2 LINE L2 3026 3161 -152 2000 119 154 19 chr10 128937822 128938199 -11378566 - MSTA LTR MaLR 0 428 1 290 264 130 21 chr10 128938199 128938258 -11378507 + L2 LINE L2 3161 3308 -5 207 0 0 0 chr10 128939835 128939858 -11376907 + (TA)n Simple_repeat Simple_repeat 1 23 0 2291 82 4 0 chr10 128939859 128940139 -11376626 - AluSp SINE Alu -31 282 2 21 0 0 0 chr10 128940826 128940847 -11375918 + AT_rich Low_complexity Low_complexity 1 21 0 2313 70 0 11 chr10 128944288 128944594 -11372171 - AluSg SINE Alu 0 303 1 249 185 19 0 chr10 128944602 128944656 -11372109 + MER3 DNA MER1_type 155 209 0 205 289 0 0 chr10 128945226 128945278 -11371487 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 1440 153 50 0 chr10 128945279 128945520 -11371245 - AluJo SINE Alu -23 289 37 481 205 8 82 chr10 128949115 128949237 -11367528 + MER94 DNA DNA 1 113 -21 2215 119 3 3 chr10 128950063 128950373 -11366392 - AluSx SINE Alu -2 310 1 32 26 0 0 chr10 128950381 128950420 -11366345 + AT_rich Low_complexity Low_complexity 1 39 0 1396 246 41 51 chr10 128950830 128951337 -11365428 + MLT1J LTR MaLR 2 503 -8 478 284 48 63 chr10 128951341 128951426 -11365339 + L1MC4a LINE L1 5564 5649 -2159 471 258 126 19 chr10 128951426 128951585 -11365180 - MER5B DNA MER1_type 0 178 3 2307 71 3 35 chr10 128951586 128951897 -11364868 + AluY SINE Alu 1 301 -10 478 284 48 63 chr10 128951897 128952080 -11364685 + L1MC4a LINE L1 5648 5830 -1978 560 281 76 5 chr10 128952324 128952509 -11364256 + L2 LINE L2 3112 3309 -4 313 299 56 35 chr10 128953443 128953587 -11363178 + LTR33A LTR ERVL 2 148 -375 633 260 44 6 chr10 128953693 128953874 -11362891 + LTR33A LTR ERVL 328 515 -8 605 155 0 0 chr10 128957403 128957506 -11359259 - L1MB8 LINE L1 -5 6173 6071 1798 173 38 0 chr10 128957527 128957871 -11358894 - L1MB8 LINE L1 -585 5593 5238 357 62 0 0 chr10 128958044 128958092 -11358673 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 420 282 15 8 chr10 128958105 128958236 -11358529 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 217 286 11 22 chr10 128958299 128958390 -11358375 - MIR SINE MIR -86 122 33 1274 196 46 3 chr10 128959912 128960197 -11356568 + MER33 DNA MER1_type 6 302 -22 514 212 17 67 chr10 128960330 128960509 -11356256 + MER5B DNA MER1_type 6 175 -3 2286 102 6 13 chr10 128960683 128960997 -11355768 - AluSx SINE Alu 0 312 1 2333 96 7 0 chr10 128961942 128962235 -11354530 - AluSx SINE Alu -15 297 3 188 245 20 0 chr10 128963512 128963561 -11353204 + L2 LINE L2 3262 3311 -2 2115 104 4 4 chr10 128964249 128964529 -11352236 - AluSg SINE Alu -30 280 1 213 250 107 36 chr10 128964626 128964738 -11352027 + MER5B DNA MER1_type 3 122 -56 1419 185 26 114 chr10 128964741 128965169 -11351596 - MLT1B LTR MaLR 0 390 1 434 188 68 10 chr10 128965427 128965532 -11351233 + MER69 DNA AcHobo 63 2522 -4 263 254 15 0 chr10 128965696 128965763 -11351002 - MLT1J LTR MaLR -332 179 112 1651 185 32 0 chr10 128966358 128966639 -11350126 + AluSx SINE Alu 1 290 -22 324 83 0 0 chr10 128966709 128966757 -11350008 + (CA)n Simple_repeat Simple_repeat 1 48 0 652 281 63 9 chr10 128967773 128967999 -11348766 + MIR SINE MIR 26 262 0 271 250 76 65 chr10 128968234 128968418 -11348347 + L1ME3 LINE L1 5302 5487 -2321 1059 232 60 41 chr10 128969484 128969850 -11346915 - MER93b LTR ERV1 0 373 1 234 326 90 14 chr10 128970562 128970706 -11346059 + MIR SINE MIR 108 262 0 458 208 286 0 chr10 128970721 128970889 -11345876 + MIR SINE MIR 9 224 -38 1654 130 8 8 chr10 128971121 128971375 -11345390 - AluSq SINE Alu -58 255 2 266 143 238 0 chr10 128971381 128971444 -11345321 - Charlie7 DNA MER1_type -2207 405 328 232 254 36 27 chr10 128971512 128971622 -11345143 - Charlie7 DNA MER1_type -2443 169 59 593 242 0 0 chr10 128971678 128971802 -11344963 + FLAM_A SINE Alu 1 124 -9 353 137 68 0 chr10 128971812 128971885 -11344880 + L1MA8 LINE L1 6214 6291 0 1210 258 98 19 chr10 128971959 128972436 -11344329 + L1ME3 LINE L1 5633 6147 -15 2298 87 0 3 chr10 128973635 128973942 -11342823 + AluSx SINE Alu 1 306 0 4058 169 23 3 chr10 128973955 128974664 -11342101 - L1MB2 LINE L1 -2 6169 5447 198 0 0 0 chr10 128975547 128975569 -11341196 + (A)n Simple_repeat Simple_repeat 1 22 0 526 213 19 73 chr10 128976270 128976558 -11340207 - MLT1A1 LTR MaLR 0 396 33 2053 107 6 49 chr10 128976780 128976822 -11339943 - AluSx SINE Alu 0 312 270 279 0 0 0 chr10 128976822 128976853 -11339912 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2053 107 6 49 chr10 128976853 128977136 -11339629 - AluSx SINE Alu -42 270 1 1721 169 51 93 chr10 128977773 128978087 -11338678 - MLT2D LTR ERVL 0 414 121 2435 89 0 3 chr10 128978087 128978400 -11338365 - AluSx SINE Alu 0 312 1 1721 169 51 93 chr10 128978400 128978517 -11338248 - MLT2D LTR ERVL -293 121 1 588 229 30 78 chr10 128980039 128980270 -11336495 - L2 LINE L2 -1 3312 3093 545 231 186 24 chr10 128980433 128980728 -11336037 + LTR16B LTR ERVL 122 464 0 183 317 19 0 chr10 128980987 128981091 -11335674 + L2 LINE L2 2650 2755 -559 296 314 43 4 chr10 128981226 128981427 -11335338 - L3 LINE CR1 -87 1490 1216 2031 162 10 54 chr10 128981526 128981839 -11334926 - MLT1B LTR MaLR 0 390 98 2242 131 0 0 chr10 128981839 128982145 -11334620 + AluSx SINE Alu 1 306 -6 2031 162 10 54 chr10 128982145 128982239 -11334526 - MLT1B LTR MaLR -292 98 1 214 267 100 0 chr10 128985173 128985263 -11331502 - MIR SINE MIR -88 120 22 309 89 0 0 chr10 128985303 128985348 -11331417 + (TG)n Simple_repeat Simple_repeat 2 46 0 934 195 131 72 chr10 128985813 128986188 -11330577 + LTR16A1 LTR ERVL 61 457 0 244 298 48 0 chr10 128986476 128986560 -11330205 + L2 LINE L2 3226 3313 0 432 67 0 0 chr10 128986580 128986640 -11330125 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 585 253 94 9 chr10 128987149 128987382 -11329383 - MER112 DNA MER1_type -2 254 2 1713 122 4 0 chr10 128987621 128987858 -11328907 + AluSx SINE Alu 1 238 -74 246 278 11 73 chr10 128988164 128988355 -11328410 + G-rich Low_complexity Low_complexity 1 179 0 241 221 0 106 chr10 128988645 128988784 -11327981 - L1MD3 LINE L1 -147 7772 7541 1370 290 101 44 chr10 128988817 128989472 -11327293 - MER115 DNA AcHobo -1 692 1 248 317 50 0 chr10 128989710 128989811 -11326954 + L2 LINE L2 3208 3313 0 743 108 0 15 chr10 128989831 128989961 -11326804 + (TGGA)n Simple_repeat Simple_repeat 2 129 0 479 207 69 2 chr10 128990089 128990266 -11326499 + L1MD1 LINE L1 4137 4331 -1815 3256 163 148 3 chr10 128990318 128990982 -11325783 + L1MB3 LINE L1 5347 6106 -77 2848 228 57 24 chr10 128990981 128991102 -11325663 + L1MD1 LINE L1 4316 4432 -1810 * 2206 174 38 24 chr10 128991102 128991555 -11325210 + MER65C LTR ERV1 3 461 0 2848 228 57 24 chr10 128991555 128992905 -11323860 + L1MD1 LINE L1 4432 5838 -404 396 40 0 0 chr10 128992930 128992980 -11323785 + (CA)n Simple_repeat Simple_repeat 2 51 0 478 212 171 121 chr10 128993718 128994081 -11322684 - L1M4 LINE L1 -2369 3777 3397 * 1505 220 5 59 chr10 128994074 128994447 -11322318 - L1MDa LINE L1 -6174 366 14 290 324 86 0 chr10 128995300 128995405 -11321360 - MER5B DNA MER1_type -64 114 1 724 167 0 76 chr10 128996286 128996430 -11320335 - FLAM_C SINE Alu 0 133 1 469 190 33 33 chr10 128996430 128996551 -11320214 - L1MC3 LINE L1 0 7785 7665 904 186 77 5 chr10 128996557 128996751 -11320014 - L1MC2 LINE L1 -9 6335 6128 2040 141 13 0 chr10 128996754 128997053 -11319712 - AluSx SINE Alu -9 303 1 1106 223 69 14 chr10 128997834 128998372 -11318393 + L1ME LINE L1 5008 5575 -589 641 267 215 16 chr10 128998374 128998741 -11318024 - L1MC2 LINE L1 -2109 5699 5260 447 303 67 31 chr10 128998923 128999312 -11317453 - L1MC2 LINE L1 -1072 5074 4672 1134 154 40 62 chr10 128999437 128999664 -11317101 + AluJb SINE Alu 85 306 -6 186 43 0 0 chr10 128999692 128999715 -11317050 + (A)n Simple_repeat Simple_repeat 1 23 0 2067 145 0 19 chr10 128999996 129000314 -11316451 + AluSx SINE Alu 1 312 0 1020 151 36 0 chr10 129002360 129002552 -11314213 - L1MB7 LINE L1 -16 6168 5970 450 290 24 12 chr10 129002653 129002822 -11313943 + L2 LINE L2 2793 2963 -351 186 282 92 55 chr10 129002856 129003019 -11313746 + L2 LINE L2 3082 3250 -63 9043 97 2 3 chr10 129003119 129004326 -11312439 - THE1B-int LTR MaLR -374 1206 1 2333 113 22 28 chr10 129004326 129004689 -11312076 - THE1B LTR MaLR 0 364 4 21 0 0 0 chr10 129005004 129005025 -11311740 + AT_rich Low_complexity Low_complexity 1 21 0 11549 134 77 16 chr10 129005464 129005504 -11311261 + Tigger1 DNA MER2_type 16 52 -2366 216 0 0 0 chr10 129005504 129005528 -11311237 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 11549 134 77 16 chr10 129005528 129006310 -11310455 + Tigger1 DNA MER2_type 52 785 -1633 2409 83 0 3 chr10 129006310 129006611 -11310154 + AluY SINE Alu 1 300 -11 11549 134 77 16 chr10 129006611 129007751 -11309014 + Tigger1 DNA MER2_type 785 2098 -320 2548 146 21 17 chr10 129007751 129008169 -11308596 + MSTB1 LTR MaLR 1 420 -12 1808 145 55 26 chr10 129008178 129008489 -11308276 + Tigger1 DNA MER2_type 2099 2418 0 381 340 109 18 chr10 129008679 129009240 -11307525 + L2 LINE L2 1620 2231 -1083 3146 179 38 7 chr10 129009287 129009874 -11306891 + MER6A DNA MER2_type 1 605 0 289 299 122 7 chr10 129009924 129010071 -11306694 + L1MC/D LINE L1 5599 5762 -2046 1884 169 39 11 chr10 129010097 129010459 -11306306 + L1MC2 LINE L1 5613 5984 -360 1925 106 22 0 chr10 129010924 129011227 -11305538 - AluY SINE Alu 0 309 1 2125 138 0 0 chr10 129011360 129011658 -11305107 - AluSg SINE Alu -12 298 1 483 245 49 6 chr10 129011693 129011856 -11304909 + L1MC4 LINE L1 7688 7857 -185 432 181 0 87 chr10 129011975 129012102 -11304663 + L1MC4 LINE L1 7925 8040 -2 1933 149 13 7 chr10 129012606 129012914 -11303851 - AluJb SINE Alu -2 310 1 2459 34 10 3 chr10 129015794 129016092 -11300673 - AluY SINE Alu -11 300 1 778 127 33 83 chr10 129016459 129016640 -11300125 - MER20 DNA MER1_type 0 219 48 889 200 64 129 chr10 129016971 129017422 -11299343 + MLT1A1 LTR MaLR 1 359 -6 226 238 0 0 chr10 129017451 129017493 -11299272 + 5S rRNA rRNA 1 42 -79 2213 51 41 37 chr10 129017916 129018211 -11298554 + AluY SINE Alu 1 296 -15 248 162 0 0 chr10 129018666 129018703 -11298062 + Alu SINE Alu 1 37 -266 2334 94 0 0 chr10 129018972 129019270 -11297495 - AluSg1 SINE Alu -11 298 1 1160 102 27 16 chr10 129023215 129023402 -11293363 + L1PA8 LINE L1 5984 6172 0 1353 146 49 28 chr10 129023955 129024242 -11292523 - L1MA4 LINE L1 -21 6279 5987 200 269 0 64 chr10 129024304 129024382 -11292383 + MIR SINE MIR 168 240 -22 456 237 110 17 chr10 129024471 129024644 -11292121 - MER112 DNA MER1_type -7 253 65 320 326 108 0 chr10 129024992 129025121 -11291644 - MIR3 SINE MIR -34 174 32 448 203 0 24 chr10 129025498 129025621 -11291144 - L1M4 LINE L1 -1808 4338 4219 284 250 107 18 chr10 129026126 129026238 -11290527 - MER112 DNA MER1_type -6 254 133 2122 91 0 88 chr10 129026473 129026815 -11289950 - AluSx SINE Alu 0 312 1 880 302 250 43 chr10 129026849 129028900 -11287865 + L2 LINE L2 735 3272 0 477 337 10 10 chr10 129029385 129029587 -11287178 + LTR16C LTR ERVL 290 491 0 3225 78 23 0 chr10 129030529 129030963 -11285802 + MLT2A1 LTR ERVL 1 444 0 497 238 46 0 chr10 129031356 129031507 -11285258 + MER104 DNA Tc2 18 175 -5 866 174 0 41 chr10 129031793 129031965 -11284800 - FRAM SINE Alu -1 165 1 2163 117 0 3 chr10 129032484 129032783 -11283982 + AluSx SINE Alu 1 298 -14 270 0 0 0 chr10 129034111 129034141 -11282624 + (T)n Simple_repeat Simple_repeat 1 30 0 1493 180 109 0 chr10 129034295 129034562 -11282203 + AluJo SINE Alu 1 296 -16 643 245 90 27 chr10 129037016 129037204 -11279561 - MIR SINE MIR -39 223 24 2269 119 0 0 chr10 129037204 129037506 -11279259 - AluSx SINE Alu -10 302 1 1980 133 4 0 chr10 129038316 129038586 -11278179 + AluSx SINE Alu 30 300 -12 2180 112 7 0 chr10 129042002 129042296 -11274469 - AluSx SINE Alu -16 296 1 257 312 113 43 chr10 129042503 129042734 -11274031 - L2 LINE L2 -56 3257 3011 275 336 109 15 chr10 129042980 129043117 -11273648 - MIR3 SINE MIR -7 201 52 381 182 6 115 chr10 129044420 129044585 -11272180 - L1MC5 LINE L1 -995 6966 6820 593 299 107 13 chr10 129045043 129045277 -11271488 - MIR SINE MIR 0 262 7 22 0 0 0 chr10 129045369 129045391 -11271374 + AT_rich Low_complexity Low_complexity 1 22 0 1320 243 66 86 chr10 129045471 129045856 -11270909 + L1MC4 LINE L1 7236 7627 -415 1591 211 0 7 chr10 129045856 129046140 -11270625 + AluJb SINE Alu 1 282 -30 1320 243 66 86 chr10 129046140 129046572 -11270193 + L1MC4 LINE L1 7627 8037 -5 226 282 150 68 chr10 129046616 129046836 -11269929 + L2 LINE L2 3030 3267 -5 21 57 0 0 chr10 129047294 129047329 -11269436 + AT_rich Low_complexity Low_complexity 1 35 0 1089 196 45 0 chr10 129047404 129047624 -11269141 + MER58 DNA MER1_type 3 232 -2188 413 145 14 0 chr10 129047609 129047678 -11269087 + MER58 DNA MER1_type 2350 2419 -1 * 2270 203 46 43 chr10 129048422 129049033 -11267732 - Charlie1 DNA MER1_type -388 2373 1761 1206 213 103 101 chr10 129099068 129099087 -11217678 + MER72 LTR ERV1 76 93 -629 2073 74 0 74 chr10 129099087 129099413 -11217352 + AluSp SINE Alu 1 302 -11 1206 213 103 101 chr10 129099413 129099985 -11216780 + MER72 LTR ERV1 93 668 -54 337 259 93 37 chr10 129100530 129100638 -11216127 + MIR SINE MIR 101 214 -48 1122 231 33 75 chr10 129100744 129100977 -11215788 - MLT1B LTR MaLR -1 389 177 1939 141 3 6 chr10 129100977 129101290 -11215475 - AluJb SINE Alu 0 312 1 1122 231 33 75 chr10 129101290 129101445 -11215320 - MLT1B LTR MaLR -213 177 17 311 266 13 0 chr10 129101709 129101788 -11214977 - MIR SINE MIR -109 153 74 1998 118 0 16 chr10 129102103 129102409 -11214356 - AluSg SINE Alu -9 301 1 505 180 82 16 chr10 129102813 129102899 -11213866 + Charlie5 DNA MER1_type 1 105 -93 2263 85 3 16 chr10 129102899 129103215 -11213550 - AluSp SINE Alu -1 312 1 505 180 82 16 chr10 129103215 129103255 -11213510 + Charlie5 DNA MER1_type 105 141 -57 1295 149 52 10 chr10 129103255 129103617 -11213148 + L1MCa LINE L1 1380 1851 -4575 533 88 0 0 chr10 129103619 129103687 -11213078 + AluS SINE Alu 2 69 -244 368 78 0 0 chr10 129103931 129103982 -11212783 - AluSq SINE Alu -6 297 247 1788 94 39 0 chr10 129103997 129104252 -11212513 - AluSq SINE Alu -48 265 1 355 178 11 56 chr10 129105040 129105130 -11211635 - MER20 DNA MER1_type 0 219 134 1710 261 68 7 chr10 129105295 129105751 -11211014 - MLT1H1 LTR MaLR -17 538 55 1976 112 0 16 chr10 129105767 129106070 -11210695 + AluSx SINE Alu 1 298 -14 1331 106 14 0 chr10 129106773 129106980 -11209785 - AluY SINE Alu -8 303 94 246 81 29 0 chr10 129107110 129107153 -11209612 + L1M2 LINE L1 5743 5787 -397 1291 154 107 29 chr10 129107153 129107425 -11209340 + AluSg SINE Alu 1 293 -17 557 207 33 80 chr10 129107602 129107752 -11209013 - L1MC5 LINE L1 -570 7391 7249 359 225 44 62 chr10 129107785 129107945 -11208820 + L1MC5 LINE L1 7717 7873 -88 23 0 0 0 chr10 129107953 129107976 -11208789 + AT_rich Low_complexity Low_complexity 1 23 0 2076 111 0 46 chr10 129108014 129108338 -11208427 + AluSx SINE Alu 1 309 -3 458 295 35 53 chr10 129108339 129108566 -11208199 + L2 LINE L2 2836 3058 -214 855 77 13 58 chr10 129109602 129109758 -11207007 + AluSq/x SINE Alu 1 149 -163 260 153 47 0 chr10 129110150 129110235 -11206530 + CT-rich Low_complexity Low_complexity 4 92 0 864 210 0 12 chr10 129111190 129111357 -11205408 - AluJo/FRAM SINE Alu -1 301 137 1216 101 37 5 chr10 129111360 129111549 -11205216 - AluY SINE Alu -14 297 103 2377 70 0 6 chr10 129113104 129113416 -11203349 - AluY SINE Alu -1 310 1 355 135 18 153 chr10 129113619 129113660 -11203105 + L1MCa LINE L1 2283 2328 -4098 2117 121 3 6 chr10 129113660 129113973 -11202792 + AluSx SINE Alu 1 312 0 355 135 18 153 chr10 129113973 129114042 -11202723 + L1MCa LINE L1 2328 2378 -4048 335 221 0 0 chr10 129114043 129114112 -11202653 + AluSx SINE Alu 1 54 -249 3057 112 16 5 chr10 129114112 129114559 -11202206 - LTR22A LTR ERVK 0 458 7 1732 107 12 4 chr10 129114563 129114807 -11201958 + AluSx SINE Alu 50 295 -17 742 210 22 11 chr10 129114807 129114988 -11201777 + L1MCa LINE L1 2425 2607 -4000 1415 155 37 19 chr10 129114996 129115267 -11201498 + AluJo SINE Alu 11 286 -26 2107 228 39 22 chr10 129115273 129115818 -11200947 + L1MCa LINE L1 2553 3112 -3314 458 228 132 9 chr10 129115818 129115932 -11200833 + FLAM_A SINE Alu 1 128 -5 2107 228 39 22 chr10 129115932 129116026 -11200739 + L1MCa LINE L1 3112 3203 -3223 206 209 70 0 chr10 129116168 129116211 -11200554 - MER5A DNA MER1_type -140 49 4 403 167 15 0 chr10 129116490 129116556 -11200209 + Tigger5 DNA MER2_type 1 67 -2256 * 1288 86 17 0 chr10 129116550 129116725 -11200040 + Tigger5 DNA MER2_type 2062 2239 -84 311 289 221 0 chr10 129116772 129116876 -11199889 + L2 LINE L2 3136 3262 -10 21 0 0 0 chr10 129118399 129118420 -11198345 + AT_rich Low_complexity Low_complexity 1 21 0 457 36 0 0 chr10 129119269 129119324 -11197441 + AluSp/q SINE Alu 239 293 -20 1931 156 3 0 chr10 129119514 129119802 -11196963 - AluSx SINE Alu -23 289 1 2012 98 0 89 chr10 129120913 129121239 -11195526 - AluSg SINE Alu -13 297 1 590 100 0 0 chr10 129121391 129121471 -11195294 - AluY SINE Alu -230 81 2 375 138 100 23 chr10 129121471 129121592 -11195173 - L1M4 LINE L1 -812 5334 5200 * 815 243 47 80 chr10 129121562 129121916 -11194849 - L1MEc LINE L1 -3725 3232 2868 2528 66 3 19 chr10 129121916 129122234 -11194531 - AluSp SINE Alu 0 313 1 815 243 47 80 chr10 129122234 129122716 -11194049 - L1MEc LINE L1 -4089 2868 2463 2286 106 3 0 chr10 129122791 129123093 -11193672 - AluY SINE Alu -8 303 1 634 179 81 0 chr10 129123147 129123270 -11193495 - L1MEc LINE L1 -5627 1232 1100 1976 108 9 48 chr10 129123275 129123590 -11193175 + AluSq SINE Alu 1 303 -10 2200 215 96 11 chr10 129124317 129124851 -11191914 - L1M4 LINE L1 -1986 4160 3582 297 224 47 47 chr10 129124851 129124958 -11191807 - Charlie8 DNA MER1_type -2295 122 16 1228 177 5 0 chr10 129125230 129125428 -11191337 + MER20 DNA MER1_type 20 218 -1 428 256 50 38 chr10 129125597 129125757 -11191008 - L1ME LINE L1 -458 5663 5502 2524 72 3 0 chr10 129126690 129126995 -11189770 - AluY SINE Alu -5 306 1 2195 114 0 10 chr10 129127003 129127300 -11189465 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 129127612 129127634 -11189131 + GC_rich Low_complexity Low_complexity 1 22 0 355 271 3 31 chr10 129127863 129128224 -11188541 + G-rich Low_complexity Low_complexity 1 350 0 2117 108 3 3 chr10 129128876 129129214 -11187551 + AluSx SINE Alu 1 312 0 2325 103 0 0 chr10 129130070 129130361 -11186404 + AluSx SINE Alu 1 291 -21 935 187 80 36 chr10 129131025 129131276 -11185489 + L1MB8 LINE L1 5896 6157 -21 243 0 0 0 chr10 129131293 129131320 -11185445 + (TG)n Simple_repeat Simple_repeat 2 28 0 2034 90 83 0 chr10 129131337 129131614 -11185151 - AluSp SINE Alu -11 302 3 397 208 0 0 chr10 129132748 129132825 -11183940 + MER116 DNA Mariner 3 79 -1 2524 68 0 6 chr10 129133315 129133626 -11183139 - AluY SINE Alu -2 309 1 23 54 0 0 chr10 129133798 129133835 -11182930 + AT_rich Low_complexity Low_complexity 1 37 0 2479 86 0 0 chr10 129134559 129134861 -11181904 + AluSp SINE Alu 1 302 -11 387 292 47 80 chr10 129134874 129135233 -11181532 + HAL1b LINE L1 54 393 -955 2293 81 0 3 chr10 129135233 129135554 -11181211 - AluY SINE Alu 0 320 1 387 292 47 80 chr10 129135554 129135720 -11181045 + HAL1b LINE L1 393 563 -785 2146 145 0 3 chr10 129135726 129136037 -11180728 + AluSx SINE Alu 1 310 -2 2508 66 0 13 chr10 129136037 129136338 -11180427 + AluY SINE Alu 1 297 -14 2070 115 0 14 chr10 129136338 129136632 -11180133 + AluSx SINE Alu 1 291 -21 1816 157 3 7 chr10 129137353 129137639 -11179126 - AluJb SINE Alu -27 285 1 844 218 159 38 chr10 129137641 129138013 -11178752 + L1MC5 LINE L1 7509 7925 -36 24 0 0 0 chr10 129138020 129138044 -11178721 + AT_rich Low_complexity Low_complexity 1 24 0 1727 170 10 7 chr10 129138115 129138409 -11178356 + AluJo SINE Alu 1 295 -17 854 166 0 14 chr10 129139666 129139811 -11176954 + FLAM_C SINE Alu 1 143 0 2320 79 10 0 chr10 129140106 129140396 -11176369 - AluY SINE Alu -18 293 1 1077 113 0 0 chr10 129140398 129140540 -11176225 - AluY SINE Alu -169 142 1 251 143 143 10 chr10 129140721 129140819 -11175946 + AluSg SINE Alu 2 112 -188 2355 230 143 75 chr10 129141629 129141704 -11175061 + HAL1 LINE L1 1 69 -2438 2171 129 0 0 chr10 129141704 129141998 -11174767 - AluSg SINE Alu -15 295 2 2355 230 143 75 chr10 129141998 129143242 -11173523 + HAL1 LINE L1 69 1227 -1280 2509 77 0 6 chr10 129143242 129143555 -11173210 + AluY SINE Alu 1 311 0 2355 230 143 75 chr10 129143555 129143589 -11173176 + HAL1 LINE L1 1227 1257 -1250 2225 93 30 0 chr10 129143589 129143889 -11172876 + AluY SINE Alu 1 309 -2 2355 230 143 75 chr10 129143889 129144022 -11172743 + HAL1 LINE L1 1257 1590 -917 1965 108 4 4 chr10 129144151 129144411 -11172354 - AluSx SINE Alu -52 260 1 588 287 99 59 chr10 129144411 129144955 -11171810 + L2 LINE L2 1337 1902 -1412 1154 73 0 0 chr10 129144956 129145093 -11171672 - AluSc SINE Alu -15 294 158 532 297 72 8 chr10 129146415 129146651 -11170114 - MIR SINE MIR -9 253 3 2322 102 0 3 chr10 129147553 129147858 -11168907 + AluSg SINE Alu 1 304 -6 1783 169 10 26 chr10 129148135 129148267 -11168498 + AluJb SINE Alu 1 134 -178 2341 98 3 0 chr10 129148267 129148564 -11168201 + AluSp SINE Alu 1 298 -15 1783 169 10 26 chr10 129148564 129148744 -11168021 + AluJb SINE Alu 134 308 -4 2084 138 0 3 chr10 129148788 129149093 -11167672 + AluSg SINE Alu 1 304 -6 2201 106 0 22 chr10 129149233 129149544 -11167221 + AluSx SINE Alu 1 304 -8 540 196 21 0 chr10 129149633 129149730 -11167035 + AluJ/FLAM SINE Alu 1 99 -213 1486 111 9 31 chr10 129149882 129150108 -11166657 + AluSq SINE Alu 93 313 0 6748 195 72 40 chr10 129150108 129151432 -11165333 + L1MC2 LINE L1 2926 4206 -2138 2359 115 0 0 chr10 129151432 129151744 -11165021 + AluSx SINE Alu 1 312 0 6748 195 72 40 chr10 129151744 129151757 -11165008 + L1MC2 LINE L1 4206 4217 -2127 2055 133 0 27 chr10 129151757 129152058 -11164707 + AluSx SINE Alu 1 293 -19 6748 195 72 40 chr10 129152058 129152157 -11164608 + L1MC2 LINE L1 4217 4311 -2033 2459 91 44 11 chr10 129152157 129152520 -11164245 + THE1C LTR MaLR 1 375 0 6748 195 72 40 chr10 129152520 129153236 -11163529 + L1MC2 LINE L1 4311 5003 -1341 2296 105 0 0 chr10 129153236 129153532 -11163233 + AluSx SINE Alu 1 296 -16 6748 195 72 40 chr10 129153532 129154679 -11162086 + L1MC2 LINE L1 5003 6333 -11 563 194 69 6 chr10 129154698 129154858 -11161907 + Charlie5 DNA MER1_type 2416 2585 -27 1496 106 0 0 chr10 129155519 129155708 -11161057 - AluSc SINE Alu -120 189 1 1312 152 0 23 chr10 129155710 129155927 -11160838 + AluSg/x SINE Alu 99 310 0 207 286 18 0 chr10 129155960 129156016 -11160749 - MIR SINE MIR -135 73 17 2319 104 0 0 chr10 129156220 129156528 -11160237 + AluSc SINE Alu 1 308 -1 892 177 6 50 chr10 129156878 129157059 -11159706 + MLT1H LTR MaLR 375 547 -2 22 0 0 0 chr10 129157864 129157886 -11158879 + AT_rich Low_complexity Low_complexity 1 22 0 2155 112 0 0 chr10 129157924 129158202 -11158563 - AluSc SINE Alu -31 278 1 1217 114 0 23 chr10 129158321 129158496 -11158269 - AluSg/x SINE Alu -11 299 129 2169 105 3 23 chr10 129158975 129159281 -11157484 + AluSx SINE Alu 1 300 -12 2282 89 3 3 chr10 129159291 129159606 -11157159 + AluSp SINE Alu 2 316 0 247 70 53 53 chr10 129159830 129159887 -11156878 + AluSc SINE Alu 243 299 0 440 243 140 40 chr10 129160268 129160490 -11156275 + MIR SINE MIR 19 262 0 1990 135 0 13 chr10 129160786 129161090 -11155675 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 129161307 129161328 -11155437 + AT_rich Low_complexity Low_complexity 1 21 0 743 171 0 8 chr10 129161337 129161460 -11155305 + FLAM_C SINE Alu 1 122 -21 1764 184 0 3 chr10 129161472 129161779 -11154986 + AluJb SINE Alu 1 306 0 2115 115 3 3 chr10 129161829 129162125 -11154640 - AluSx SINE Alu -16 296 1 1161 228 162 73 chr10 129162332 129162401 -11154364 + L1MC5 LINE L1 6476 6537 -1424 2168 107 7 32 chr10 129162401 129162710 -11154055 + AluSx SINE Alu 1 301 -11 1161 228 162 73 chr10 129162710 129162721 -11154044 + L1MC5 LINE L1 6537 6546 -1415 2330 87 17 0 chr10 129162721 129163010 -11153755 + AluY SINE Alu 1 294 -17 1161 228 162 73 chr10 129163010 129163450 -11153315 + L1MC5 LINE L1 6546 7092 -869 2078 113 10 3 chr10 129163450 129163742 -11153023 + AluSx SINE Alu 1 294 -18 1161 228 162 73 chr10 129163742 129164006 -11152759 + L1MC5 LINE L1 7092 7331 -630 422 136 99 12 chr10 129164036 129164117 -11152648 + L1MC5 LINE L1 7298 7385 -576 739 135 16 24 chr10 129164276 129164425 -11152340 + AluSg/x SINE Alu 171 312 0 4915 153 41 44 chr10 129164878 129165849 -11150916 + LTR5 LTR ERVK 2 969 0 2482 47 0 7 chr10 129166105 129166403 -11150362 - AluY SINE Alu -15 296 1 2343 55 4 0 chr10 129166425 129166699 -11150066 - AluY SINE Alu -23 288 14 289 275 0 0 chr10 129166750 129166819 -11149946 + Charlie8 DNA MER1_type 2 70 -2347 2247 104 0 19 chr10 129167053 129167371 -11149394 + AluSq SINE Alu 1 312 -1 2311 71 0 11 chr10 129167411 129167693 -11149072 + AluSc SINE Alu 1 279 -30 181 0 0 0 chr10 129167693 129167713 -11149052 + (TAAA)n Simple_repeat Simple_repeat 1 124 0 2360 163 32 57 chr10 129167823 129167849 -11148916 + L1M4 LINE L1 4633 4658 -1488 1775 176 0 20 chr10 129167849 129168150 -11148615 + AluJo SINE Alu 1 295 -17 2360 163 32 57 chr10 129168150 129168350 -11148415 + L1M4 LINE L1 4658 4861 -1285 1979 115 0 0 chr10 129168350 129168654 -11148111 - AluSc SINE Alu 0 304 1 2360 163 32 57 chr10 129168654 129168948 -11147817 + L1M4 LINE L1 4861 5142 -1004 271 136 0 0 chr10 129168953 129168997 -11147768 + MLT1D LTR MaLR 462 505 0 1002 269 68 17 chr10 129169001 129169354 -11147411 - LTR33 LTR ERVL -131 390 20 282 276 129 49 chr10 129169548 129169711 -11147054 + MLT1L LTR MaLR 222 397 -218 282 235 198 0 chr10 129169728 129169809 -11146956 + MLT1L LTR MaLR 446 542 -73 1100 107 65 0 chr10 129169817 129169985 -11146780 - AluSc SINE Alu 0 309 131 370 87 0 0 chr10 129170738 129170784 -11145981 + AluSq SINE Alu 150 195 -108 817 142 0 64 chr10 129171115 129171256 -11145509 + FLAM_C SINE Alu 2 133 0 2280 77 3 0 chr10 129171311 129171598 -11145167 - AluSg SINE Alu -22 288 1 864 222 96 30 chr10 129173389 129173722 -11143043 - L1MC4 LINE L1 -5 8037 7683 517 242 120 95 chr10 129174097 129174307 -11142458 + L1MC4a LINE L1 5530 5733 -2075 1952 114 10 23 chr10 129174307 129174613 -11142152 + AluSx SINE Alu 1 302 -10 2343 61 0 3 chr10 129174622 129174918 -11141847 + AluY SINE Alu 1 295 -16 517 242 120 95 chr10 129174918 129175098 -11141667 + L1MC4a LINE L1 5740 5940 -1868 1988 84 69 0 chr10 129175105 129175379 -11141386 - AluSp SINE Alu -20 293 1 959 190 0 0 chr10 129175922 129176096 -11140669 - AluJo SINE Alu -18 294 121 21 0 0 0 chr10 129176127 129176148 -11140617 + AT_rich Low_complexity Low_complexity 1 21 0 1172 58 0 13 chr10 129176164 129176318 -11140447 + AluY SINE Alu 81 232 -79 1714 106 12 4 chr10 129176320 129176575 -11140190 + AluSg SINE Alu 17 273 -37 1881 113 0 11 chr10 129177310 129177594 -11139171 - AluSx SINE Alu -29 283 3 1957 124 7 0 chr10 129177600 129177890 -11138875 - AluSg SINE Alu -18 292 1 1006 158 45 54 chr10 129177996 129178217 -11138548 + MER20 DNA MER1_type 1 219 0 26 30 0 0 chr10 129179232 129179265 -11137500 + AT_rich Low_complexity Low_complexity 1 33 0 194 325 97 0 chr10 129179399 129179513 -11137252 - L2 LINE L2 -222 3050 2926 189 325 52 0 chr10 129179697 129179774 -11136991 + MER5A DNA MER1_type 35 115 -74 27 49 0 0 chr10 129180004 129180045 -11136720 + AT_rich Low_complexity Low_complexity 1 41 0 1706 169 7 3 chr10 129180355 129180651 -11136114 - AluJb SINE Alu -15 297 1 383 127 63 38 chr10 129181216 129181295 -11135470 + MER20 DNA MER1_type 1 81 -138 2459 65 0 0 chr10 129181618 129181926 -11134839 + AluY SINE Alu 1 308 -3 2323 66 10 0 chr10 129182656 129182960 -11133805 + AluY SINE Alu 1 307 -4 1633 141 0 15 chr10 129183945 129184215 -11132550 + AluSx SINE Alu 1 266 -46 2172 80 17 13 chr10 129184862 129185163 -11131602 + AluSx SINE Alu 1 302 -10 340 176 95 0 chr10 129185650 129185724 -11131041 - MER5A DNA MER1_type -5 184 104 22 56 0 0 chr10 129186249 129186285 -11130480 + GC_rich Low_complexity Low_complexity 1 36 0 2030 206 31 11 chr10 129186929 129187381 -11129384 - LOR1b LTR ERV1 0 461 1 767 176 65 7 chr10 129187405 129187558 -11129207 - AluSg/x SINE Alu -14 298 137 321 295 38 9 chr10 129187909 129188014 -11128751 + MLT1L LTR MaLR 133 240 -375 998 143 6 0 chr10 129188111 129188272 -11128493 + AluSp SINE Alu 132 293 -20 237 243 309 20 chr10 129188290 129188442 -11128323 + MLT1L LTR MaLR 368 563 -52 6022 110 62 64 chr10 129188499 129190067 -11126698 - pTR5 LTR ERV1 0 2438 375 406 158 24 43 chr10 129190258 129190511 -11126254 + GA-rich Low_complexity Low_complexity 1 248 0 506 252 9 26 chr10 129190526 129191027 -11125738 + G-rich Low_complexity Low_complexity 1 492 0 837 93 0 53 chr10 129191185 129191335 -11125430 + AluSc SINE Alu 163 304 -5 492 169 127 175 chr10 129191486 129191593 -11125172 - MER5A DNA MER1_type 0 189 78 2026 92 0 116 chr10 129191593 129191928 -11124837 - AluSx SINE Alu -2 300 5 492 169 127 175 chr10 129191928 129191942 -11124823 - MER5A DNA MER1_type -111 78 65 2232 97 0 10 chr10 129191942 129192250 -11124515 - AluY SINE Alu -6 305 1 492 169 127 175 chr10 129192250 129192316 -11124449 - MER5A DNA MER1_type -124 65 10 1289 201 3 67 chr10 129192426 129192739 -11124026 + MLT2B3 LTR ERVL 262 554 0 338 194 54 32 chr10 129192739 129192832 -11123933 - L1MD3 LINE L1 -1458 6537 6443 746 277 51 40 chr10 129192945 129193198 -11123567 - HERV16 LTR ERVL -4739 257 2 493 203 158 30 chr10 129193199 129193332 -11123433 - LTR16A LTR ERVL 0 450 301 461 266 97 0 chr10 129193328 129193441 -11123324 - LTR16A LTR ERVL -311 139 16 * 2180 120 3 0 chr10 129193736 129194079 -11122686 - AluSx SINE Alu 0 344 1 452 274 65 13 chr10 129194281 129194434 -11122331 - HAL1 LINE L1 -815 1692 1532 2130 118 0 3 chr10 129194446 129194750 -11122015 - AluSx SINE Alu -9 303 1 456 162 0 0 chr10 129194818 129194892 -11121873 - MER47A DNA MER2_type -31 335 262 2830 183 25 21 chr10 129194895 129195476 -11121289 + LTR9 LTR ERV1 2 609 -3 1373 154 28 8 chr10 129195480 129195727 -11121038 - MER47A DNA MER2_type -107 259 8 2394 191 63 109 chr10 129195729 129196122 -11120643 + LTR8A LTR ERV1 2 412 -315 189 0 0 0 chr10 129196122 129196143 -11120622 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 646 189 16 0 chr10 129196148 129196270 -11120495 - FLAM_A SINE Alu -9 124 1 2394 191 63 109 chr10 129196270 129196631 -11120134 + LTR8A LTR ERV1 416 727 0 346 268 138 55 chr10 129196641 129196781 -11119984 - L2 LINE L2 -68 3245 3118 1943 142 3 0 chr10 129196781 129197077 -11119688 - AluSx SINE Alu -15 297 1 346 268 138 55 chr10 129197077 129197190 -11119575 - L2 LINE L2 -195 3118 2971 1705 249 100 70 chr10 129197609 129197772 -11118993 + HAL1 LINE L1 1599 1756 -751 2158 101 0 0 chr10 129197772 129198069 -11118696 + AluY SINE Alu 1 297 -14 1705 249 100 70 chr10 129198069 129198110 -11118655 + HAL1 LINE L1 1756 1794 -713 2032 109 3 0 chr10 129198110 129198393 -11118372 + AluSq SINE Alu 11 294 -19 1705 249 100 70 chr10 129198393 129199070 -11117695 + HAL1 LINE L1 1794 2507 0 2204 91 0 3 chr10 129199270 129199567 -11117198 + AluSg SINE Alu 1 296 -14 1430 57 25 198 chr10 129200003 129200321 -11116444 + LTR12 LTR ERV1 12 274 -440 359 257 10 0 chr10 129200322 129200423 -11116342 + LTR30 LTR ERV1 542 643 -79 747 108 0 0 chr10 129200423 129200525 -11116240 + LTR12 LTR ERV1 480 581 -133 1947 69 11 11 chr10 129200525 129200786 -11115979 + AluSx SINE Alu 31 291 -21 1449 164 61 0 chr10 129200853 129201116 -11115649 + AluSg SINE Alu 2 280 -30 1321 132 39 147 chr10 129201433 129201767 -11114998 + AluJb SINE Alu 12 309 -3 2249 73 0 16 chr10 129201931 129202234 -11114531 + AluSg SINE Alu 1 298 -12 1378 157 25 0 chr10 129202289 129202531 -11114234 - L1PA16 LINE L1 -3 6163 5916 346 246 131 84 chr10 129202531 129202722 -11114043 + LTR4 LTR ERV1 1 200 -396 518 229 75 45 chr10 129202935 129203136 -11113629 + LTR4 LTR ERV1 390 596 0 491 366 88 9 chr10 129204039 129204407 -11112358 + L2 LINE L2 2377 2785 -529 1303 197 23 77 chr10 129204407 129204717 -11112048 + AluJo SINE Alu 1 293 -9 491 366 88 9 chr10 129204717 129204780 -11111985 + L2 LINE L2 2785 2842 -472 489 211 70 105 chr10 129205098 129205497 -11111268 + L1MC5 LINE L1 7541 7925 -36 2211 88 0 3 chr10 129205795 129206091 -11110674 + AluSg SINE Alu 3 297 -13 2176 100 3 22 chr10 129206513 129206832 -11109933 + AluSq SINE Alu 1 313 0 1290 187 6 62 chr10 129206975 129207296 -11109469 + AluJo SINE Alu 9 311 -1 2093 87 0 11 chr10 129207298 129207605 -11109160 + AluSq SINE Alu 1 304 0 191 291 156 14 chr10 129207661 129207802 -11108963 + MIR SINE MIR 3 163 -99 22 35 0 0 chr10 129208702 129208731 -11108034 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 129209441 129209473 -11107292 + GC_rich Low_complexity Low_complexity 1 32 0 309 150 33 0 chr10 129209659 129209719 -11107046 - LTR8A LTR ERV1 -466 261 200 427 119 0 0 chr10 129209719 129209778 -11106987 - AluS SINE Alu -251 60 2 918 148 55 60 chr10 129209781 129209809 -11106956 - LTR8A LTR ERV1 -516 211 184 2256 90 0 3 chr10 129209809 129210110 -11106655 + AluY SINE Alu 1 300 -11 918 148 55 60 chr10 129210110 129210264 -11106501 - LTR8A LTR ERV1 -543 184 30 690 291 53 54 chr10 129210277 129210543 -11106222 + L1M4 LINE L1 2938 3203 -2943 2135 110 0 7 chr10 129210543 129210842 -11105923 - AluSx SINE Alu -13 299 3 690 291 53 54 chr10 129210842 129211431 -11105334 + L1M4 LINE L1 3203 3792 -2354 1721 185 39 17 chr10 129211433 129211790 -11104975 + MLT1A1 LTR MaLR 1 365 0 259 273 58 32 chr10 129211793 129211947 -11104818 + L1MCc LINE L1 1359 1516 -4907 592 200 70 48 chr10 129212005 129212215 -11104550 + L1MC5 LINE L1 7507 7726 -235 2799 102 0 0 chr10 129212215 129212579 -11104186 + THE1B LTR MaLR 1 364 0 592 200 70 48 chr10 129212579 129212638 -11104127 + L1MC5 LINE L1 7726 7782 -179 1827 133 0 0 chr10 129212642 129212913 -11103852 + AluSx SINE Alu 1 271 -41 233 39 58 19 chr10 129212932 129212984 -11103781 + A-rich Low_complexity Low_complexity 2 55 0 296 225 22 116 chr10 129212996 129213134 -11103631 + L1MC5 LINE L1 7783 7907 -54 2100 75 43 0 chr10 129213365 129213646 -11103119 - AluY SINE Alu -9 302 10 1827 81 4 4 chr10 129214517 129214764 -11102001 + AluSc SINE Alu 60 306 -3 2109 99 3 13 chr10 129215431 129215734 -11101031 - AluSg SINE Alu -10 300 1 201 319 162 26 chr10 129216618 129217117 -11099648 + L2 LINE L2 1907 2473 -841 * 212 247 39 52 chr10 129217093 129217170 -11099595 + L2 LINE L2 3196 3271 -1 2176 178 33 21 chr10 129217219 129217408 -11099357 + MSTB LTR MaLR 1 186 -240 1455 163 48 17 chr10 129217408 129217703 -11099062 + AluJo SINE Alu 1 304 -8 2173 104 3 0 chr10 129217712 129218010 -11098755 + AluSg SINE Alu 1 299 -11 2176 178 33 21 chr10 129218010 129218231 -11098534 + MSTB LTR MaLR 193 426 0 282 298 71 12 chr10 129218745 129218829 -11097936 - MIR3 SINE MIR -7 201 113 424 299 32 6 chr10 129219669 129219826 -11096939 + L1MC4a LINE L1 5778 5938 -1870 1518 185 0 34 chr10 129219828 129220159 -11096606 + AluJb SINE Alu 1 321 0 727 174 8 8 chr10 129220593 129220725 -11096040 - FLAM_C SINE Alu 0 133 2 2165 124 10 3 chr10 129220784 129221091 -11095674 - AluSx SINE Alu -3 309 1 2266 125 54 20 chr10 129221647 129221999 -11094766 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr10 129222504 129222525 -11094240 + AT_rich Low_complexity Low_complexity 1 21 0 2030 142 7 13 chr10 129222683 129222992 -11093773 + AluSx SINE Alu 6 312 0 1768 156 7 31 chr10 129223356 129223645 -11093120 + AluJb SINE Alu 11 292 -20 480 316 82 10 chr10 129223645 129223841 -11092924 + HAL1 LINE L1 1100 1309 -1198 965 205 0 0 chr10 129223848 129224014 -11092751 + FRAM SINE Alu 7 172 -4 28 29 0 0 chr10 129224014 129224049 -11092716 + AT_rich Low_complexity Low_complexity 1 35 0 4137 159 4 13 chr10 129224287 129225004 -11091761 - MER50 LTR ERV1 -23 711 1 2216 115 0 7 chr10 129225228 129225524 -11091241 - AluSc SINE Alu -15 294 1 610 156 121 0 chr10 129225525 129225666 -11091099 - L1MCa LINE L1 -4424 2002 1845 2231 88 14 14 chr10 129225666 129225961 -11090804 - AluSg SINE Alu -15 295 1 2367 71 6 43 chr10 129226456 129226779 -11089986 - AluY SINE Alu 0 311 1 2133 93 10 17 chr10 129226791 129227081 -11089684 - AluSq SINE Alu -25 288 1 246 218 154 91 chr10 129227194 129227304 -11089461 - MIR SINE MIR -40 222 106 877 204 132 26 chr10 129227416 129227644 -11089121 - MIR SINE MIR -15 247 2 328 203 0 0 chr10 129227753 129227812 -11088953 + L2 LINE L2 3254 3312 -1 21 0 0 0 chr10 129228273 129228294 -11088471 + AT_rich Low_complexity Low_complexity 1 21 0 525 173 33 21 chr10 129228969 129229092 -11087673 + L1MD3 LINE L1 7871 8041 -1 2000 134 7 0 chr10 129229095 129229372 -11087393 + AluSx SINE Alu 1 279 -33 911 97 36 6 chr10 129229372 129229537 -11087228 + GA-rich Low_complexity Low_complexity 3 172 0 200 303 0 71 chr10 129229852 129229951 -11086814 + MIR SINE MIR 81 146 -62 289 302 176 19 chr10 129230140 129230299 -11086466 + MIR SINE MIR 8 191 -71 423 172 82 8 chr10 129230437 129230559 -11086206 + AluSq/x SINE Alu 1 131 -182 1285 158 59 24 chr10 129230807 129230991 -11085774 + MSTC LTR MaLR 163 360 -68 2035 113 27 30 chr10 129230991 129231291 -11085474 + AluSx SINE Alu 2 300 -12 1285 158 59 24 chr10 129231291 129231360 -11085405 + MSTC LTR MaLR 360 425 -3 210 71 0 0 chr10 129231870 129231898 -11084867 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 340 181 0 0 chr10 129231900 129231972 -11084793 - LTR30 LTR ERV1 -99 623 552 2330 93 7 3 chr10 129232708 129233008 -11083757 + AluSq SINE Alu 1 301 -12 2315 106 0 3 chr10 129233011 129233314 -11083451 + AluY SINE Alu 2 303 -8 535 264 36 0 chr10 129233327 129233467 -11083298 + MER103 DNA DNA 10 154 -12 213 216 0 0 chr10 129233916 129233953 -11082812 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2229 91 27 0 chr10 129233953 129234249 -11082516 - AluY SINE Alu -7 304 1 1343 93 124 0 chr10 129234828 129235021 -11081744 + AluY SINE Alu 1 217 -94 478 147 20 113 chr10 129235542 129235746 -11081019 + AluSg/x SINE Alu 125 309 -1 544 264 63 6 chr10 129236089 129236248 -11080517 + MIR SINE MIR 80 247 -15 192 250 71 18 chr10 129236766 129236822 -11079943 + L2 LINE L2 3136 3194 -78 535 174 8 8 chr10 129236826 129236947 -11079818 + CT-rich Low_complexity Low_complexity 3 123 0 912 98 8 0 chr10 129236976 129237098 -11079667 - AluJb SINE Alu -189 123 1 233 224 86 17 chr10 129237147 129237205 -11079560 + MER91A DNA MER1_type 124 185 -11 516 271 52 0 chr10 129237344 129237499 -11079266 + MER103 DNA DNA 1 163 -3 22 0 0 0 chr10 129238188 129238210 -11078555 + AT_rich Low_complexity Low_complexity 1 22 0 282 323 154 41 chr10 129238549 129238769 -11077996 + L2 LINE L2 3005 3249 -23 2097 110 36 0 chr10 129239527 129239808 -11076957 - AluSq SINE Alu -22 291 1 243 0 0 0 chr10 129240224 129240251 -11076514 + (T)n Simple_repeat Simple_repeat 1 27 0 2272 82 0 0 chr10 129240881 129241161 -11075604 + AluSg SINE Alu 21 300 -10 2124 113 52 47 chr10 129241552 129241914 -11074851 - THE1B LTR MaLR 0 364 1 246 236 11 0 chr10 129242476 129242536 -11074229 - MIR SINE MIR -112 150 91 288 233 0 0 chr10 129243021 129243094 -11073671 - MER116 DNA Mariner 0 80 8 518 255 65 16 chr10 129243223 129243399 -11073366 - LTR35 LTR ERV1 -1 670 492 2055 142 3 3 chr10 129243399 129243702 -11073063 + AluSx SINE Alu 1 303 -9 518 255 65 16 chr10 129243702 129243730 -11073035 - LTR35 LTR ERV1 -179 492 467 2689 83 3 0 chr10 129243831 129244191 -11072574 + L1PA13 LINE L1 5803 6163 0 295 185 19 0 chr10 129244198 129244252 -11072513 - LTR58 LTR ERV1 -275 404 350 505 266 18 0 chr10 129244511 129244624 -11072141 - MER5A DNA MER1_type -3 186 72 2448 95 0 0 chr10 129244630 129244936 -11071829 - AluSq SINE Alu -7 306 1 851 238 235 6 chr10 129244936 129245470 -11071295 - LTR50 LTR ERVL -33 762 1 576 263 13 13 chr10 129246205 129246357 -11070408 + MIR3 SINE MIR 53 204 -4 223 328 0 0 chr10 129246543 129246601 -11070164 + MIR SINE MIR 87 144 -118 2081 102 50 3 chr10 129246611 129246894 -11069871 - AluSq SINE Alu -17 296 1 209 285 93 70 chr10 129247405 129247577 -11069188 + MIR SINE MIR 56 231 -31 2351 107 0 0 chr10 129247606 129247915 -11068850 + AluSx SINE Alu 1 309 -3 1916 100 0 0 chr10 129247953 129248192 -11068573 + AluSx SINE Alu 1 239 -73 2103 138 0 7 chr10 129248366 129248671 -11068094 + AluJb SINE Alu 5 307 -5 2374 107 0 0 chr10 129248671 129248969 -11067796 + AluSg SINE Alu 1 299 -11 1864 153 42 8 chr10 129249153 129249507 -11067258 + MLT1B LTR MaLR 9 374 -16 2172 124 6 13 chr10 129249918 129250232 -11066533 + AluSx SINE Alu 1 312 0 2476 75 3 18 chr10 129250374 129250706 -11066059 - L1PA8A LINE L1 0 6131 5805 2296 155 28 2 chr10 129250775 129251175 -11065590 - L1MB5 LINE L1 -13 6161 5752 204 40 0 0 chr10 129252696 129252721 -11064044 + (TG)n Simple_repeat Simple_repeat 2 26 0 323 275 154 13 chr10 129253013 129253162 -11063603 + MIR3 SINE MIR 32 201 -7 2464 76 0 0 chr10 129253331 129253621 -11063144 + AluSg1 SINE Alu 1 290 -19 1763 166 0 26 chr10 129254619 129254921 -11061844 - AluJo SINE Alu -8 304 11 1934 108 54 0 chr10 129255433 129255711 -11061054 - AluSx SINE Alu -19 293 1 2938 52 3 0 chr10 129255825 129256188 -11060577 + L1PA5 LINE L1 5791 6154 0 387 261 83 22 chr10 129256226 129256406 -11060359 - Charlie8 DNA MER1_type -2136 281 91 4410 231 21 44 chr10 129256406 129256469 -11060296 - L1MD1 LINE L1 -9 6233 6170 1726 191 10 3 chr10 129256469 129256763 -11060002 + AluJo SINE Alu 3 298 -14 4410 231 21 44 chr10 129256763 129257656 -11059109 - L1MD1 LINE L1 -72 6170 5319 1925 129 7 4 chr10 129257656 129257928 -11058837 - AluSg SINE Alu -24 286 14 4410 231 21 44 chr10 129257928 129258277 -11058488 - L1MD1 LINE L1 -923 5319 4963 4789 129 58 3 chr10 129258286 129259159 -11057606 - L1MC1 LINE L1 -218 6115 5186 1075 249 210 18 chr10 129259190 129259495 -11057270 - L1MD1 LINE L1 -1198 4948 4703 2473 61 7 0 chr10 129259495 129259788 -11056977 - AluY SINE Alu -16 295 1 1075 249 210 18 chr10 129259788 129259822 -11056943 - L1MD1 LINE L1 -1443 4703 4677 2424 108 0 6 chr10 129259822 129260136 -11056629 - AluSx SINE Alu 0 312 1 1075 249 210 18 chr10 129260136 129260418 -11056347 - L1MD1 LINE L1 -1469 4677 4206 1483 114 0 34 chr10 129260615 129260852 -11055913 - AluY SINE Alu -81 230 2 2180 88 24 0 chr10 129260855 129261149 -11055616 - AluSq SINE Alu -12 301 1 354 215 46 0 chr10 129261157 129261222 -11055543 - MER5A DNA MER1_type -121 68 1 2015 144 3 0 chr10 129261584 129261896 -11054869 + AluSq SINE Alu 1 313 0 2234 179 86 102 chr10 129262101 129262195 -11054570 + MER72 LTR ERV1 1 95 -627 2251 71 0 71 chr10 129262195 129262520 -11054245 + AluSp SINE Alu 1 302 -11 2234 179 86 102 chr10 129262520 129263089 -11053676 + MER72 LTR ERV1 95 653 -69 2313 92 0 3 chr10 129263089 129263381 -11053384 - AluSc SINE Alu -18 291 1 2234 179 86 102 chr10 129263381 129263450 -11053315 + MER72 LTR ERV1 653 722 0 2201 72 6 84 chr10 129263568 129263888 -11052877 - AluSq SINE Alu -16 297 3 195 246 0 18 chr10 129263892 129263949 -11052816 - MER5B DNA MER1_type -116 62 7 216 88 0 29 chr10 129263893 129263927 -11052838 + MER5A DNA MER1_type 129 161 -28 312 291 29 74 chr10 129263963 129264138 -11052627 + MER5A DNA MER1_type 23 189 0 338 324 52 48 chr10 129264236 129264486 -11052279 - L2 LINE L2 -1 3312 3062 915 172 58 6 chr10 129264497 129264671 -11052094 + MER5A DNA MER1_type 7 189 0 207 311 158 10 chr10 129264671 129264865 -11051900 - L2 LINE L2 -249 3064 2842 362 258 39 137 chr10 129264941 129265037 -11051728 - L2 LINE L2 -645 2669 2565 797 193 37 66 chr10 129265037 129265280 -11051485 - MER106A DNA MER1_type 0 236 1 362 258 39 137 chr10 129265280 129265398 -11051367 - L2 LINE L2 -749 2565 2437 2318 92 17 0 chr10 129265398 129265691 -11051074 + AluSx SINE Alu 1 298 -14 2153 46 88 18 chr10 129265694 129265978 -11050787 + AluY SINE Alu 1 304 -7 362 258 39 137 chr10 129265978 129266064 -11050701 - L2 LINE L2 -879 2435 2394 222 290 65 78 chr10 129266403 129266620 -11050145 - L2 LINE L2 -115 3157 2944 2542 49 3 7 chr10 129266697 129267001 -11049764 - AluY SINE Alu -6 305 3 2045 99 11 32 chr10 129267001 129267283 -11049482 - AluSp SINE Alu -35 278 1 448 250 0 33 chr10 129267607 129267727 -11049038 - MIR SINE MIR -130 132 17 306 302 47 7 chr10 129268233 129268382 -11048383 - L1ME4a LINE L1 -3 6118 5964 34 55 0 0 chr10 129268446 129268501 -11048264 + AT_rich Low_complexity Low_complexity 1 55 0 270 0 0 0 chr10 129268501 129268531 -11048234 + (CA)n Simple_repeat Simple_repeat 2 31 0 185 0 0 39 chr10 129268542 129268553 -11048212 + (TG)n Simple_repeat Simple_repeat 2 12 -14 2352 104 0 0 chr10 129268553 129268850 -11047915 + AluSx SINE Alu 1 297 -15 185 0 0 39 chr10 129268850 129268864 -11047901 + (TG)n Simple_repeat Simple_repeat 12 26 0 1817 164 60 21 chr10 129268891 129269087 -11047678 - L1MC2 LINE L1 -2 6342 6155 935 223 35 0 chr10 129269087 129269289 -11047476 - MER6B DNA MER2_type 0 210 2 1817 164 60 21 chr10 129269289 129269477 -11047288 - L1MC2 LINE L1 -189 6155 5943 858 193 0 0 chr10 129269561 129269737 -11047028 - L1ME3 LINE L1 -108 6054 5879 609 128 20 0 chr10 129269767 129269869 -11046896 - L1MB2 LINE L1 -1 6170 6067 4887 224 81 48 chr10 129269879 129270774 -11045991 - L1MEc LINE L1 -3065 3150 2286 2088 123 0 45 chr10 129270774 129270947 -11045818 - AluSx SINE Alu -16 296 142 2240 109 14 0 chr10 129270947 129271240 -11045525 - AluSg SINE Alu -13 297 1 2088 123 0 45 chr10 129271240 129271376 -11045389 - AluSx SINE Alu -170 142 1 4887 224 81 48 chr10 129271376 129272182 -11044583 - L1MEc LINE L1 -3929 2286 1508 2361 89 3 0 chr10 129272182 129272473 -11044292 - AluSx SINE Alu -12 300 9 4887 224 81 48 chr10 129272473 129273347 -11043418 - L1MEc LINE L1 -4707 1508 414 1617 118 22 112 chr10 129273347 129273669 -11043096 - AluYb8 SINE Alu -19 299 7 4887 224 81 48 chr10 129273669 129273901 -11042864 - L1MEc LINE L1 -5801 414 191 2470 87 0 3 chr10 129273909 129274219 -11042546 - AluY SINE Alu -2 309 1 1616 202 3 43 chr10 129275004 129275150 -11041615 + AluJb SINE Alu 1 151 -161 2453 82 7 0 chr10 129275150 129275454 -11041311 + AluSp SINE Alu 1 306 -7 1616 202 3 43 chr10 129275454 129275629 -11041136 + AluJb SINE Alu 151 309 -3 1946 100 0 50 chr10 129276270 129276549 -11040216 + AluSq SINE Alu 1 265 -48 247 282 35 12 chr10 129278052 129278137 -11038628 - L2 LINE L2 -196 3076 2990 2044 144 6 13 chr10 129278671 129278984 -11037781 - AluSx SINE Alu -1 311 1 2586 72 0 0 chr10 129279176 129279483 -11037282 - AluY SINE Alu -4 307 1 2234 108 3 0 chr10 129279483 129279780 -11036985 - AluSx SINE Alu -14 298 1 289 302 176 19 chr10 129279915 129280074 -11036691 - MIR SINE MIR -71 191 8 200 303 0 71 chr10 129280263 129280362 -11036403 - MIR SINE MIR -62 146 81 2492 74 7 0 chr10 129280897 129281193 -11035572 + AluSg SINE Alu 1 298 -12 324 283 105 26 chr10 129281202 129281354 -11035411 - MIR3 SINE MIR -21 187 24 294 299 37 9 chr10 129281521 129281628 -11035137 - L2 LINE L2 -31 3241 3132 308 299 109 7 chr10 129281665 129281812 -11034953 - L2 LINE L2 -16 3297 3136 1098 123 99 9 chr10 129281834 129282046 -11034719 - L1MB3 LINE L1 0 6183 5953 213 121 0 0 chr10 129282046 129282079 -11034686 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 813 176 0 0 chr10 129282080 129282205 -11034560 - FRAM SINE Alu -32 144 20 1772 118 3 40 chr10 129282376 129282673 -11034092 - AluSg SINE Alu -24 286 1 2338 97 3 3 chr10 129282675 129282984 -11033781 - AluY SINE Alu -1 310 2 1490 95 0 5 chr10 129282990 129283179 -11033586 - AluSg/x SINE Alu -10 300 113 1673 168 39 0 chr10 129283179 129283440 -11033325 - L1MB3 LINE L1 -429 5751 5475 194 0 39 0 chr10 129283440 129283466 -11033299 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1673 168 39 0 chr10 129283466 129283513 -11033252 - L1MB3 LINE L1 -705 5475 5431 387 316 95 77 chr10 129283517 129283838 -11032927 - L2 LINE L2 -240 3073 2748 279 0 0 0 chr10 129284403 129284434 -11032331 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 312 175 0 0 chr10 129284480 129284537 -11032228 - LTR36 LTR ERV1 0 611 555 1381 133 0 50 chr10 129284539 129284780 -11031985 + AluJb SINE Alu 72 300 -12 2473 158 46 53 chr10 129284797 129285359 -11031406 - LTR36 LTR ERV1 -53 558 1 2165 93 3 14 chr10 129285458 129285748 -11031017 - AluY SINE Alu -3 308 22 186 300 0 0 chr10 129285817 129285867 -11030898 + MIR SINE MIR 105 154 -108 24 0 0 0 chr10 129288396 129288420 -11028345 + AT_rich Low_complexity Low_complexity 1 24 0 2441 69 0 29 chr10 129288430 129288736 -11028029 + AluY SINE Alu 1 297 -14 1788 157 30 0 chr10 129289233 129289520 -11027245 + AluJo SINE Alu 7 301 0 666 213 60 37 chr10 129297103 129297117 -11019648 - L1MB7 LINE L1 -2 6182 6170 1973 128 35 14 chr10 129297117 129297406 -11019359 + AluJb SINE Alu 3 297 -15 666 213 60 37 chr10 129297406 129297607 -11019158 - L1MB7 LINE L1 -14 6170 5962 32 43 0 0 chr10 129298449 129298495 -11018270 + AT_rich Low_complexity Low_complexity 1 46 0 2539 60 0 13 chr10 129298541 129298855 -11017910 + AluY SINE Alu 1 310 -1 2570 47 0 7 chr10 129299113 129299414 -11017351 + AluY SINE Alu 1 299 -12 1122 178 10 0 chr10 129300328 129300525 -11016240 - MER20 DNA MER1_type -1 218 20 260 204 45 45 chr10 129300816 129300904 -11015861 + Charlie8 DNA MER1_type 35 122 -2295 1051 243 39 9 chr10 129300904 129301434 -11015331 + L1M4 LINE L1 3582 4160 -1986 911 209 4 43 chr10 129301990 129302224 -11014541 - AluJb SINE Alu -3 309 85 1531 161 31 0 chr10 129303121 129303376 -11013389 + AluJb SINE Alu 32 294 -18 194 217 130 14 chr10 129304076 129304145 -11012620 + L2 LINE L2 2639 2715 -599 841 162 7 34 chr10 129304146 129304287 -11012478 + AluJo SINE Alu 1 139 -173 1811 147 3 20 chr10 129304287 129304579 -11012186 + AluJo SINE Alu 4 290 -22 328 20 41 0 chr10 129304953 129305002 -11011763 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2460 102 0 3 chr10 129305864 129306177 -11010588 + AluSx SINE Alu 1 312 0 2471 88 0 0 chr10 129306976 129307282 -11009483 - AluSq SINE Alu -7 306 1 1472 87 22 0 chr10 129308600 129308783 -11007982 - AluSg SINE Alu -123 187 1 2290 95 0 46 chr10 129309278 129309605 -11007160 - AluSx SINE Alu 0 312 1 2973 87 65 98 chr10 129309606 129309852 -11006913 - L1PB1 LINE L1 -179 5972 5720 2239 106 10 7 chr10 129309852 129310155 -11006610 - AluSc SINE Alu -5 304 1 2192 92 24 3 chr10 129310155 129310447 -11006318 - AluSg SINE Alu -12 298 1 2973 87 65 98 chr10 129310447 129310783 -11005982 - L1PB1 LINE L1 -429 5722 5408 400 281 41 16 chr10 129310783 129310904 -11005861 + MER5A DNA MER1_type 64 187 -2 508 292 34 0 chr10 129311044 129311222 -11005543 + L1MC5 LINE L1 7710 7893 -68 309 308 17 58 chr10 129311701 129311821 -11004944 - MIR SINE MIR -74 134 20 234 244 0 0 chr10 129312474 129312519 -11004246 + (CA)n Simple_repeat Simple_repeat 2 46 0 402 254 121 0 chr10 129312669 129312794 -11003971 - MER20B DNA MER1_type -21 198 56 444 19 0 0 chr10 129312920 129312973 -11003792 + (CA)n Simple_repeat Simple_repeat 1 53 0 321 319 139 12 chr10 129313162 129313328 -11003437 + MIR3 SINE MIR 8 194 -14 21 36 0 0 chr10 129314544 129314572 -11002193 + GC_rich Low_complexity Low_complexity 1 28 0 956 247 106 43 chr10 129314962 129315359 -11001406 + MLT1L LTR MaLR 184 605 -10 306 179 0 0 chr10 129315730 129315786 -11000979 + L1P5 LINE L1 5718 5773 -378 2399 87 0 0 chr10 129315799 129316098 -11000667 + AluSq SINE Alu 1 299 -14 258 32 0 0 chr10 129316111 129316142 -11000623 + (CA)n Simple_repeat Simple_repeat 2 32 0 2151 99 7 7 chr10 129316164 129316492 -11000273 + AluSq SINE Alu 1 328 0 233 258 125 33 chr10 129316717 129316837 -10999928 + L1ME4a LINE L1 5989 6119 -2 263 321 131 29 chr10 129317294 129317431 -10999334 + MIR3 SINE MIR 36 186 -22 966 233 46 0 chr10 129318324 129318543 -10998222 - MLT1A1 LTR MaLR 0 365 137 1926 138 7 0 chr10 129318545 129318827 -10997938 - AluSp SINE Alu 0 313 30 187 241 7 35 chr10 129318845 129318986 -10997779 + CT-rich Low_complexity Low_complexity 1 137 0 2115 106 4 0 chr10 129319145 129319418 -10997347 + AluSx SINE Alu 26 299 -13 1972 156 0 31 chr10 129319750 129320071 -10996694 + AluJo SINE Alu 2 312 0 203 192 19 58 chr10 129320076 129320128 -10996637 + GA-rich Low_complexity Low_complexity 1 50 0 187 323 63 38 chr10 129320339 129320497 -10996268 + MIR SINE MIR 41 202 -60 202 269 19 0 chr10 129320729 129320781 -10995984 + (TGGG)n Simple_repeat Simple_repeat 3 55 0 462 269 124 26 chr10 129321169 129321362 -10995403 + MIR SINE MIR 30 241 -21 2403 90 3 0 chr10 129322688 129322988 -10993777 + AluSx SINE Alu 1 301 -11 181 320 53 0 chr10 129323876 129323951 -10992814 - L2 LINE L2 0 3313 3235 2220 125 0 6 chr10 129324242 129324555 -10992210 + AluSx SINE Alu 1 311 -1 390 260 63 0 chr10 129324774 129324901 -10991864 - L2 LINE L2 0 3313 3179 344 378 64 0 chr10 129325415 129325648 -10991117 - MIR SINE MIR 0 262 15 192 152 0 0 chr10 129325796 129325829 -10990936 + CT-rich Low_complexity Low_complexity 1 33 0 628 231 0 14 chr10 129326609 129326756 -10990009 + MER5B DNA MER1_type 28 172 -6 753 175 0 0 chr10 129326835 129326955 -10989810 + Tigger3(Golem) DNA MER2_type 2919 3038 0 862 112 7 99 chr10 129327003 129327041 -10989724 - FLAM_C SINE Alu -174 138 98 2413 81 0 41 chr10 129327041 129327361 -10989404 + AluY SINE Alu 1 307 -4 862 112 7 99 chr10 129327361 129327474 -10989291 - FLAM_C SINE Alu -214 98 1 353 217 174 0 chr10 129327479 129327571 -10989194 - L2 LINE L2 -3 3269 3162 491 291 126 5 chr10 129327581 129327787 -10988978 - MIR SINE MIR 0 262 32 207 69 0 0 chr10 129328017 129328046 -10988719 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1728 154 33 0 chr10 129328048 129328320 -10988445 - AluJb SINE Alu -31 281 1 946 146 42 46 chr10 129328468 129328708 -10988057 + MER33 DNA MER1_type 58 296 -28 453 244 180 29 chr10 129329135 129329307 -10987458 + MIR SINE MIR 26 223 -39 536 330 46 9 chr10 129330895 129331113 -10985652 + MIR SINE MIR 37 262 0 1653 201 0 16 chr10 129331557 129331861 -10984904 - AluJo SINE Alu -13 299 1 216 316 0 53 chr10 129332264 129332359 -10984406 - MIR3 SINE MIR -20 188 99 264 321 107 7 chr10 129332589 129332729 -10984036 + MIR SINE MIR 77 230 -32 405 292 4 7 chr10 129332792 129332934 -10983831 - MIR SINE MIR -67 141 42 817 226 9 28 chr10 129333017 129333229 -10983536 + MER3 DNA MER1_type 1 208 -1 845 93 0 0 chr10 129333788 129333895 -10982870 - AluSq/x SINE Alu -206 107 1 543 311 63 13 chr10 129333896 129334134 -10982631 - L1ME4a LINE L1 -296 5825 5576 2158 108 7 0 chr10 129334556 129334833 -10981932 - AluSx SINE Alu -33 279 1 249 340 10 10 chr10 129334838 129334938 -10981827 + L2 LINE L2 2854 2953 -319 735 151 0 8 chr10 129334994 129335120 -10981645 - FLAM_C SINE Alu -8 125 1 920 261 18 5 chr10 129335156 129335378 -10981387 + MIR SINE MIR 8 232 -30 1018 182 0 0 chr10 129335569 129335739 -10981026 + AluJb SINE Alu 137 306 -6 269 149 96 11 chr10 129336026 129336120 -10980645 - MER5C DNA MER1_type -24 300 199 437 224 75 0 chr10 129336130 129336237 -10980528 - MER20 DNA MER1_type -2 217 103 198 225 0 0 chr10 129336237 129336277 -10980488 - MER5C DNA MER1_type -179 145 106 2134 143 7 0 chr10 129336277 129336621 -10980144 + AluSx SINE Alu 1 346 0 320 242 0 0 chr10 129336628 129336694 -10980071 - MER5C DNA MER1_type -210 114 49 2034 125 0 10 chr10 129336801 129337097 -10979668 + AluSq SINE Alu 1 293 -20 210 71 0 0 chr10 129337339 129337367 -10979398 + (TCCCC)n Simple_repeat Simple_repeat 4 31 0 258 350 0 17 chr10 129337966 129338086 -10978679 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 327 305 32 0 chr10 129338125 129338220 -10978545 - L2 LINE L2 -27 3245 3148 230 289 61 101 chr10 129338206 129338434 -10978331 + L2 LINE L2 3014 3232 -40 * 2277 97 0 23 chr10 129338705 129339015 -10977750 - AluSx SINE Alu -9 303 1 564 270 37 17 chr10 129339511 129339732 -10977033 - MIR SINE MIR -19 243 23 1692 234 124 7 chr10 129340184 129340628 -10976137 - MER82 DNA MER2_type 0 653 158 240 252 39 19 chr10 129340864 129340967 -10975798 + L1MD3 LINE L1 6475 6579 -1416 1912 246 111 84 chr10 129341047 129341124 -10975641 + L1MC4 LINE L1 6924 6997 -1045 279 0 0 0 chr10 129341124 129341155 -10975610 + (CA)n Simple_repeat Simple_repeat 2 32 0 1912 246 111 84 chr10 129341155 129341394 -10975371 + L1MC4 LINE L1 6997 7228 -814 2429 83 0 10 chr10 129341394 129341695 -10975070 + AluSc SINE Alu 1 298 -11 1912 246 111 84 chr10 129341695 129341972 -10974793 + L1MC4 LINE L1 7228 7496 -546 1965 129 3 30 chr10 129341972 129342274 -10974491 + AluJo SINE Alu 1 294 -18 1912 246 111 84 chr10 129342274 129342765 -10974000 + L1MC4 LINE L1 7496 8040 -2 2414 86 7 0 chr10 129343360 129343662 -10973103 + AluSq SINE Alu 1 304 -9 1956 133 21 7 chr10 129344167 129344452 -10972313 + AluSx SINE Alu 1 289 -23 24 53 0 0 chr10 129344963 129345001 -10971764 + AT_rich Low_complexity Low_complexity 1 38 0 2421 60 0 3 chr10 129345091 129345398 -10971367 - AluY SINE Alu 0 306 1 414 336 43 24 chr10 129345969 129346222 -10970543 + MIR SINE MIR 3 260 -2 2122 108 23 19 chr10 129346412 129346719 -10970046 + AluSx SINE Alu 1 308 -4 225 253 63 42 chr10 129346746 129346841 -10969924 - L2 LINE L2 -12 3301 3205 226 283 30 10 chr10 129347044 129347143 -10969622 + MIR3 SINE MIR 98 198 -10 1942 163 0 17 chr10 129347539 129347839 -10968926 - AluSx SINE Alu -17 295 1 576 220 75 45 chr10 129348098 129348287 -10968478 + MIR SINE MIR 3 200 -62 927 168 37 9 chr10 129348287 129348501 -10968264 + L1MB2 LINE L1 5952 6171 0 2295 118 0 3 chr10 129349156 129349469 -10967296 + AluSx SINE Alu 1 312 0 2198 109 7 3 chr10 129349976 129350279 -10966486 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr10 129350489 129350517 -10966248 + AT_rich Low_complexity Low_complexity 1 28 0 807 185 51 0 chr10 129350952 129351109 -10965656 + AluJb SINE Alu 126 290 -22 348 184 128 18 chr10 129351298 129351407 -10965358 - MER5A DNA MER1_type -9 180 60 2141 134 7 7 chr10 129351854 129352159 -10964606 + AluSq SINE Alu 1 305 -8 240 210 145 0 chr10 129352377 129352439 -10964326 - MER116 DNA Mariner -3 77 7 433 261 35 28 chr10 129353785 129353927 -10962838 + MER117 DNA MER1_type 1 143 -54 243 300 106 19 chr10 129354478 129354638 -10962127 - L2 LINE L2 -509 2805 2632 256 156 0 0 chr10 129357559 129357604 -10959161 - MLT2D LTR ERVL -7 547 503 1933 164 39 6 chr10 129357642 129358001 -10958764 - MLT2D LTR ERVL -41 373 3 2086 199 38 23 chr10 129358744 129359270 -10957495 + L1ME1 LINE L1 5581 6156 -10 390 269 90 72 chr10 129359568 129359903 -10956862 - L2 LINE L2 -7 3265 2925 3649 149 32 30 chr10 129359931 129359971 -10956794 - L1MC3 LINE L1 -153 7632 7594 2714 118 26 0 chr10 129359971 129360388 -10956377 + MSTC LTR MaLR 1 428 0 3649 149 32 30 chr10 129360388 129360778 -10955987 - L1MC3 LINE L1 -191 7594 7198 2197 119 0 0 chr10 129360778 129361071 -10955694 - AluSx SINE Alu -19 293 1 3649 149 32 30 chr10 129361071 129361364 -10955401 - L1MC3 LINE L1 -587 7198 6907 563 265 66 6 chr10 129363016 129363182 -10953583 + MIR SINE MIR 70 245 -17 440 330 19 28 chr10 129363333 129363548 -10953217 - L2 LINE L2 -189 3083 2871 302 211 40 0 chr10 129363883 129363959 -10952806 - L2 LINE L2 0 3272 3194 519 284 18 68 chr10 129364994 129365062 -10951703 - MIR SINE MIR -1 261 191 2031 118 20 20 chr10 129365062 129365366 -10951399 - AluSx SINE Alu -8 304 1 519 284 18 68 chr10 129365366 129365519 -10951246 - MIR SINE MIR -71 191 51 568 257 18 41 chr10 129365717 129365888 -10950877 - MIR SINE MIR -10 252 86 2636 53 0 0 chr10 129367910 129368213 -10948552 - AluY SINE Alu -8 303 1 2424 84 0 3 chr10 129368304 129368600 -10948165 - AluY SINE Alu -16 295 1 1804 139 46 11 chr10 129368918 129369198 -10947567 + AluJb SINE Alu 1 290 -22 198 103 0 0 chr10 129370091 129370120 -10946645 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 2310 94 0 23 chr10 129370201 129370509 -10946256 + AluSx SINE Alu 11 311 -1 1325 202 38 62 chr10 129372465 129372806 -10943959 - MLT1A2 LTR MaLR -41 333 1 1833 145 30 7 chr10 129373018 129373321 -10943444 - AluJo SINE Alu -2 310 1 344 382 70 0 chr10 129373515 129373701 -10943064 - MIR SINE MIR -45 217 19 23 54 0 0 chr10 129375803 129375840 -10940925 + GC_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr10 129375910 129375939 -10940826 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 129378374 129378399 -10938366 + AT_rich Low_complexity Low_complexity 1 25 0 430 293 79 0 chr10 129378653 129378793 -10937972 + MER5A DNA MER1_type 33 183 -6 190 330 40 29 chr10 129379394 129379567 -10937198 - L2 LINE L2 -784 2530 2356 1579 190 0 52 chr10 129379964 129380290 -10936475 - AluJb SINE Alu -3 309 1 661 232 205 0 chr10 129381487 129381672 -10935093 - MER58A DNA MER1_type -1 223 1 467 245 57 137 chr10 129381691 129381840 -10934925 + L2 LINE L2 2130 2289 -1025 2049 138 0 0 chr10 129381840 129382136 -10934629 - AluJb SINE Alu -16 296 1 467 245 57 137 chr10 129382136 129382337 -10934428 + L2 LINE L2 2289 2452 -862 1576 138 21 97 chr10 129382347 129382687 -10934078 - AluYb8 SINE Alu -4 314 1 256 318 168 5 chr10 129382728 129382942 -10933823 + L2 LINE L2 2695 2943 -371 281 238 0 0 chr10 129385128 129385191 -10931574 - MLT1K LTR MaLR -16 572 510 183 80 0 0 chr10 129386034 129386059 -10930706 + (GGCTG)n Simple_repeat Simple_repeat 3 27 0 1301 148 46 83 chr10 129386713 129387038 -10929727 - L1MA8 LINE L1 -72 6219 5907 1644 152 57 17 chr10 129387044 129387340 -10929425 - AluJb SINE Alu -4 308 1 1494 160 14 59 chr10 129387869 129388157 -10928608 + AluJb SINE Alu 1 275 -37 405 0 0 0 chr10 129388158 129388203 -10928562 + (TC)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 129388202 129388231 -10928534 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 326 224 24 24 chr10 129388790 129388875 -10927890 - MER34 LTR ERV1 0 542 458 802 200 118 5 chr10 129389042 129389237 -10927528 - MER34C LTR ERV1 -368 217 1 952 175 6 0 chr10 129389427 129389587 -10927178 + FAM SINE Alu 10 170 -15 268 380 0 0 chr10 129390270 129390449 -10926316 + GA-rich Low_complexity Low_complexity 2 180 0 1310 96 5 11 chr10 129390778 129390966 -10925799 - AluSx SINE Alu -125 187 1 2140 93 0 26 chr10 129391059 129391372 -10925393 - AluSx SINE Alu -7 305 1 465 297 65 0 chr10 129391769 129391924 -10924841 - MIR SINE MIR -19 243 79 2032 124 0 3 chr10 129393264 129393562 -10923203 + AluSx SINE Alu 15 311 -1 190 349 36 78 chr10 129394085 129394251 -10922514 + MIR3 SINE MIR 14 172 -36 213 296 0 25 chr10 129395000 129395081 -10921684 + (TATG)n Simple_repeat Simple_repeat 2 80 0 919 126 0 15 chr10 129395359 129395494 -10921271 - FLAM_C SINE Alu 0 133 1 1972 107 0 52 chr10 129395504 129395830 -10920935 - AluSp SINE Alu -4 309 1 1976 119 7 10 chr10 129396262 129396564 -10920201 - AluSq SINE Alu -10 303 3 265 300 0 14 chr10 129396609 129396679 -10920086 + AluSp SINE Alu 135 203 -100 784 197 14 14 chr10 129396687 129396829 -10919936 + FRAM SINE Alu 5 146 -30 2060 129 3 0 chr10 129396846 129397149 -10919616 - AluSx SINE Alu -8 304 1 2092 131 0 3 chr10 129397816 129398128 -10918637 - AluSx SINE Alu -1 311 1 215 273 91 11 chr10 129398212 129398300 -10918465 - MIR SINE MIR -109 153 59 1955 113 3 34 chr10 129398607 129398925 -10917840 - AluSx SINE Alu 0 309 1 395 241 95 37 chr10 129400158 129400308 -10916457 + MIR3 SINE MIR 46 196 -12 197 132 26 0 chr10 129400467 129400505 -10916260 + (TATG)n Simple_repeat Simple_repeat 4 42 0 369 323 8 24 chr10 129401306 129401433 -10915332 + MIR SINE MIR 20 144 -118 870 194 12 12 chr10 129401457 129401617 -10915148 - FRAM SINE Alu -18 158 1 183 274 71 36 chr10 129401627 129401711 -10915054 + MIR SINE MIR 175 261 -1 1789 71 22 0 chr10 129401747 129401972 -10914793 + MER30 DNA MER1_type 1 230 0 1774 173 3 22 chr10 129404239 129404557 -10912208 - AluJo SINE Alu 0 312 1 215 319 178 12 chr10 129404797 129404966 -10911799 - L2 LINE L2 0 3272 3076 2023 75 8 0 chr10 129407032 129407297 -10909468 + AluY SINE Alu 45 311 0 2245 96 0 0 chr10 129407312 129407614 -10909151 + AluSx SINE Alu 1 302 -10 270 313 20 10 chr10 129408633 129408732 -10908033 + MIR3 SINE MIR 106 205 -3 1845 184 28 8 chr10 129410019 129410377 -10906388 - MLT1A1 LTR MaLR 0 365 1 274 281 0 12 chr10 129412172 129412254 -10904511 - MIR SINE MIR -125 137 57 581 307 74 45 chr10 129412359 129412668 -10904097 - HAL1 LINE L1 -335 2172 1855 624 157 10 0 chr10 129412669 129412771 -10903994 - AluJb SINE Alu -19 293 191 850 199 35 10 chr10 129412771 129412972 -10903793 - HAL1 LINE L1 -644 1863 1658 10371 38 1 107 chr10 129412993 129414538 -10902227 - SVA Other Other 0 1386 5 600 219 8 0 chr10 129414887 129415006 -10901759 + FLAM_C SINE Alu 2 121 -22 1278 202 45 14 chr10 129415250 129415537 -10901228 + AluJo SINE Alu 1 296 -16 1480 187 137 6 chr10 129417019 129417361 -10899404 + MLT1B LTR MaLR 1 387 -3 207 337 36 24 chr10 129417547 129417630 -10899135 + L2 LINE L2 3189 3272 0 2055 133 7 0 chr10 129417714 129418007 -10898758 + AluSx SINE Alu 1 295 -17 1049 191 14 18 chr10 129418116 129418336 -10898429 + MER20 DNA MER1_type 1 219 0 737 156 181 6 chr10 129419256 129419416 -10897349 + MER53 DNA DNA 1 188 -1 1201 285 106 11 chr10 129420090 129420385 -10896380 + L2 LINE L2 2826 3178 -135 2057 109 0 20 chr10 129420385 129420689 -10896076 - AluSx SINE Alu -14 298 1 1201 285 106 11 chr10 129420689 129420835 -10895930 + L2 LINE L2 3178 3309 -4 2306 93 10 3 chr10 129428126 129428427 -10888338 - AluSq SINE Alu 0 313 11 2409 97 0 0 chr10 129428641 129428940 -10887825 - AluSg SINE Alu -11 299 1 1800 162 10 26 chr10 129429429 129429738 -10887027 + AluSx SINE Alu 1 304 -8 306 280 105 64 chr10 129429838 129430199 -10886566 + L2 LINE L2 2894 3269 -3 2380 110 0 0 chr10 129430452 129430762 -10886003 + AluSx SINE Alu 1 310 -2 292 280 122 36 chr10 129431455 129431663 -10885102 - MIR SINE MIR -12 250 18 197 273 73 0 chr10 129433666 129433721 -10883044 - MIR3 SINE MIR -7 201 143 1878 129 72 0 chr10 129433750 129434028 -10882737 - AluSx SINE Alu -10 302 5 345 313 26 17 chr10 129434578 129434693 -10882072 + L2 LINE L2 3150 3265 -7 285 275 0 0 chr10 129436718 129436787 -10879978 + L2 LINE L2 3203 3271 -1 902 142 0 15 chr10 129437298 129437432 -10879333 - FLAM_C SINE Alu -1 132 1 464 351 6 6 chr10 129437600 129437765 -10879000 + MIR SINE MIR 28 192 -70 436 271 120 29 chr10 129438139 129438349 -10878416 - MIR SINE MIR -28 234 7 225 242 77 55 chr10 129439459 129439550 -10877215 - L2 LINE L2 -1 3312 3220 200 217 0 22 chr10 129440794 129440840 -10875925 + GA-rich Low_complexity Low_complexity 3 47 0 519 258 42 54 chr10 129441302 129441562 -10875203 - LTR37B LTR ERV1 -3 465 209 250 211 101 6 chr10 129441715 129441793 -10874972 - MER58B DNA MER1_type -2091 329 260 204 97 0 0 chr10 129441793 129441824 -10874941 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 250 211 101 6 chr10 129441824 129441872 -10874893 - MER58B DNA MER1_type -2160 260 2 365 183 14 0 chr10 129441885 129441956 -10874809 - LTR37B LTR ERV1 -396 72 1 384 352 49 6 chr10 129442101 129442263 -10874502 + MIR SINE MIR 80 248 -14 182 147 387 13 chr10 129442355 129442430 -10874335 - MIR SINE MIR -63 145 43 954 172 0 0 chr10 129442446 129442591 -10874174 + FRAM SINE Alu 1 145 -31 2256 107 0 3 chr10 129445849 129446139 -10870626 - AluSx SINE Alu -23 289 1 819 124 0 83 chr10 129446144 129446289 -10870476 - FLAM_C SINE Alu 0 133 1 2304 91 0 10 chr10 129449205 129449502 -10867263 - AluSq SINE Alu -19 294 1 414 222 10 0 chr10 129449555 129449654 -10867111 - L1MC4a LINE L1 -1979 5829 5730 2300 99 0 19 chr10 129449752 129450064 -10866701 - AluSq SINE Alu -7 306 1 322 215 141 33 chr10 129450583 129450704 -10866061 + MIR SINE MIR 27 160 -102 310 339 9 0 chr10 129450710 129450819 -10865946 + MIR SINE MIR 3 112 -150 230 290 58 58 chr10 129451367 129451522 -10865243 - MIR SINE MIR -70 192 38 204 333 65 22 chr10 129451890 129452028 -10864737 - L2 LINE L2 -213 3059 2916 1629 218 3 10 chr10 129452145 129452448 -10864317 - AluJo SINE Alu -6 306 6 622 258 0 0 chr10 129452456 129452588 -10864177 - FLAM_A SINE Alu 0 133 2 406 296 0 0 chr10 129453318 129453433 -10863332 - MER117 DNA MER1_type -34 163 49 201 74 0 0 chr10 129453498 129453525 -10863240 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr10 129453618 129453644 -10863121 + AT_rich Low_complexity Low_complexity 1 26 0 750 174 0 8 chr10 129453665 129453797 -10862968 - FLAM_C SINE Alu -2 131 1 2142 131 7 0 chr10 129453809 129454106 -10862659 - AluSx SINE Alu -13 299 1 285 298 50 6 chr10 129454556 129454717 -10862048 + L1ME3A LINE L1 3683 3850 -2296 372 294 9 0 chr10 129454721 129454830 -10861935 + L1ME2 LINE L1 6045 6154 -10 2852 240 35 81 chr10 129454847 129455498 -10861267 + L1ME3A LINE L1 3846 4526 -1620 1709 154 68 14 chr10 129455498 129455790 -10860975 - AluJb SINE Alu -4 308 1 2852 240 35 81 chr10 129455790 129456465 -10860300 + L1ME3A LINE L1 4526 5106 -1040 2372 105 0 0 chr10 129456465 129456770 -10859995 + AluSg SINE Alu 1 305 -5 2852 240 35 81 chr10 129456770 129456848 -10859917 + L1ME3A LINE L1 5106 5186 -960 280 143 36 0 chr10 129456982 129457038 -10859727 + Alu SINE Alu 240 297 -4 2589 236 73 38 chr10 129457047 129457304 -10859461 + L1ME3A LINE L1 5190 5437 -733 2371 107 7 3 chr10 129457304 129457614 -10859151 + AluSx SINE Alu 1 311 -1 2589 236 73 38 chr10 129457614 129458292 -10858473 + L1ME3A LINE L1 5437 6170 0 255 298 0 12 chr10 129458518 129458602 -10858163 + (TG)n Simple_repeat Simple_repeat 1 83 0 244 173 0 39 chr10 129458730 129458782 -10857983 + L2 LINE L2 3262 3311 -2 227 333 0 0 chr10 129459608 129459689 -10857076 - MER117 DNA MER1_type -41 156 76 2192 113 3 0 chr10 129459851 129460142 -10856623 + AluSx SINE Alu 7 298 -14 780 144 25 0 chr10 129460150 129460268 -10856497 + AluJ SINE Alu 7 127 -185 2444 80 0 16 chr10 129460274 129460588 -10856177 + AluSc SINE Alu 1 309 0 1228 151 0 0 chr10 129460618 129460790 -10855975 + AluJ SINE Alu 129 300 -12 447 336 0 0 chr10 129462850 129462960 -10853805 - MIR SINE MIR -139 123 14 423 255 50 28 chr10 129462976 129463117 -10853648 - MIR SINE MIR 0 262 119 699 198 43 6 chr10 129463133 129463295 -10853470 + MER96B DNA MER1_type? 250 417 0 192 310 103 0 chr10 129463295 129463382 -10853383 - MIR SINE MIR -83 125 30 * 327 345 29 7 chr10 129463365 129463504 -10853261 + MIR SINE MIR 51 192 -70 1738 206 75 55 chr10 129463509 129463874 -10852891 - MLT1D LTR MaLR 0 505 126 2928 139 6 17 chr10 129463874 129464214 -10852551 + L1PA15 LINE L1 5703 6038 -127 2955 132 5 0 chr10 129464214 129464640 -10852125 - MSTA LTR MaLR 0 428 1 2928 139 6 17 chr10 129464640 129464767 -10851998 + L1PA15 LINE L1 6038 6165 0 1738 206 75 55 chr10 129464767 129464896 -10851869 - MLT1D LTR MaLR -379 126 1 277 273 0 15 chr10 129464896 129464962 -10851803 + MIR SINE MIR 197 261 -1 2550 66 3 0 chr10 129465064 129465369 -10851396 + AluY SINE Alu 1 306 -5 233 364 85 34 chr10 129466766 129467002 -10849763 + MIR SINE MIR 15 262 0 328 275 211 14 chr10 129468985 129469127 -10847638 + L1MC4a LINE L1 7540 7709 -99 1565 78 10 0 chr10 129469425 129469618 -10847147 + AluSq SINE Alu 98 292 -21 256 310 11 23 chr10 129470618 129470705 -10846060 - L2 LINE L2 -8 3264 3179 2353 103 0 28 chr10 129471121 129471442 -10845323 + AluSx SINE Alu 1 312 0 337 263 12 0 chr10 129471644 129471724 -10845041 - MIR3 SINE MIR 0 208 128 269 259 27 36 chr10 129472655 129472767 -10843998 - L2 LINE L2 -512 2802 2692 2174 136 3 0 chr10 129472987 129473295 -10843470 - AluSq SINE Alu -4 309 1 261 0 0 0 chr10 129473333 129473362 -10843403 + (CA)n Simple_repeat Simple_repeat 2 30 0 556 317 37 19 chr10 129473396 129473887 -10842878 + L1ME LINE L1 5182 5636 -534 238 158 35 18 chr10 129473914 129473971 -10842794 + L1MC3 LINE L1 6571 6628 -1157 231 304 22 0 chr10 129474020 129474112 -10842653 + L1ME LINE L1 5714 5807 -314 1573 182 7 30 chr10 129474112 129474414 -10842351 + AluJo SINE Alu 1 295 -17 263 319 22 37 chr10 129474547 129474682 -10842083 + L2 LINE L2 3180 3312 -1 351 236 138 49 chr10 129475265 129475388 -10841377 - MER94 DNA DNA 0 134 1 250 299 0 0 chr10 129476110 129476177 -10840588 + (CACCAT)n Simple_repeat Simple_repeat 1 67 0 412 219 109 17 chr10 129476178 129476297 -10840468 - MIR SINE MIR -112 150 21 2743 166 30 41 chr10 129476488 129477049 -10839716 + L1MB5 LINE L1 5620 6174 0 23 33 0 0 chr10 129477808 129477838 -10838927 + AT_rich Low_complexity Low_complexity 1 30 0 2775 121 26 19 chr10 129478081 129478510 -10838255 - MSTB1 LTR MaLR 0 432 1 613 275 20 25 chr10 129478962 129479162 -10837603 + MIR SINE MIR 50 248 -14 436 330 62 62 chr10 129479466 129479805 -10836960 - MLT1H LTR MaLR -199 350 12 1583 201 3 16 chr10 129479852 129480166 -10836599 + AluJo SINE Alu 3 312 0 315 0 0 0 chr10 129480166 129480201 -10836564 + (CA)n Simple_repeat Simple_repeat 2 36 0 445 183 153 7 chr10 129480784 129480921 -10835844 + MIR SINE MIR 89 245 -17 187 182 68 0 chr10 129480887 129480931 -10835834 + L2 LINE L2 3254 3300 -13 * 399 56 0 0 chr10 129481213 129481267 -10835498 + (TTATA)n Simple_repeat Simple_repeat 2 55 0 2252 123 37 54 chr10 129481323 129481462 -10835303 - MER65A LTR ERV1 -1 444 304 1861 151 17 17 chr10 129481462 129481760 -10835005 - AluJb SINE Alu -13 299 2 2252 123 37 54 chr10 129481760 129482026 -10834739 - MER65A LTR ERV1 -141 304 46 874 197 0 48 chr10 129482030 129482218 -10834547 - FAM SINE Alu -6 43 1 221 333 28 9 chr10 129483511 129483619 -10833146 - L2 LINE L2 -230 3042 2933 195 333 226 9 chr10 129483703 129484123 -10832642 - L2 LINE L2 -504 2810 2300 268 264 0 0 chr10 129484170 129484223 -10832542 - L2 LINE L2 -11 3302 3250 193 289 0 0 chr10 129484709 129484754 -10832011 + L2 LINE L2 3262 3306 -7 2039 118 14 0 chr10 129484837 129485116 -10831649 + AluSx SINE Alu 13 295 -17 216 0 0 0 chr10 129485328 129485352 -10831413 + (T)n Simple_repeat Simple_repeat 1 24 0 269 217 29 0 chr10 129485453 129485522 -10831243 + MER117 DNA MER1_type 76 146 -51 969 185 22 36 chr10 129486160 129486382 -10830383 + MER20 DNA MER1_type 1 219 0 465 221 81 15 chr10 129487048 129487184 -10829581 + MIR SINE MIR 117 261 -1 220 259 0 0 chr10 129487364 129487418 -10829347 + CT-rich Low_complexity Low_complexity 1 54 0 240 163 0 0 chr10 129488672 129488715 -10828050 + CT-rich Low_complexity Low_complexity 4 46 0 523 213 85 7 chr10 129489957 129490098 -10826667 + L1MD3 LINE L1 7844 7995 0 2116 120 3 0 chr10 129490108 129490391 -10826374 + AluSq SINE Alu 1 284 -29 225 0 0 0 chr10 129490399 129490424 -10826341 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 232 277 50 10 chr10 129492344 129492445 -10824320 - L1ME4a LINE L1 -3 6118 6014 712 254 39 5 chr10 129492959 129493164 -10823601 - MIR SINE MIR -45 217 6 320 257 71 21 chr10 129494644 129494784 -10821981 - MIR3 SINE MIR -16 192 46 186 288 41 14 chr10 129494925 129494998 -10821767 - L3 LINE CR1 0 1577 1503 182 309 44 0 chr10 129497650 129497718 -10819047 + L2 LINE L2 3225 3295 -18 253 246 275 0 chr10 129498624 129498766 -10817999 - MIR3 SINE MIR -19 189 9 472 258 86 5 chr10 129499109 129499307 -10817458 + MIR SINE MIR 38 251 -11 425 266 57 0 chr10 129500531 129500655 -10816110 - L1ME LINE L1 -376 5745 5615 233 151 94 0 chr10 129500686 129500739 -10816026 - L1MC4 LINE L1 0 8042 7985 303 227 0 15 chr10 129502049 129502115 -10814650 + LTR67 LTR ERVL 5 69 -488 524 153 18 18 chr10 129502269 129502380 -10814385 - L1MA9 LINE L1 -66 6246 6136 1942 148 3 3 chr10 129502460 129502764 -10814001 + AluJb SINE Alu 1 304 -8 2466 91 0 3 chr10 129502945 129503252 -10813513 + AluSq SINE Alu 1 306 -7 248 169 214 45 chr10 129503256 129503345 -10813420 + HsTC2 DNA Tc2 1794 1897 -1 283 267 144 14 chr10 129503419 129503565 -10813200 + MIR SINE MIR 81 245 -17 1507 98 19 0 chr10 129503871 129504076 -10812689 - AluSp SINE Alu -104 209 1 437 168 42 21 chr10 129504080 129504175 -10812590 - L1ME4a LINE L1 -279 5887 5791 2226 227 42 26 chr10 129504206 129505202 -10811563 - L1ME1 LINE L1 -272 5894 4849 184 219 8 31 chr10 129505565 129505693 -10811072 + CT-rich Low_complexity Low_complexity 2 126 0 1671 110 0 4 chr10 129505878 129506106 -10810659 - AluSx SINE Alu -85 227 1 255 335 82 24 chr10 129506747 129506917 -10809848 - L2 LINE L2 -224 3048 2869 247 269 106 88 chr10 129506922 129507149 -10809616 - L3 LINE CR1 -665 912 682 192 341 58 51 chr10 129507641 129507779 -10808986 - MIR SINE MIR -122 140 2 21 0 0 0 chr10 129509195 129509216 -10807549 + AT_rich Low_complexity Low_complexity 1 21 0 474 189 44 0 chr10 129509417 129509507 -10807258 - Tigger5 DNA MER2_type 0 2323 2230 242 156 156 0 chr10 129509515 129509560 -10807205 - Tigger5 DNA MER2_type -2271 52 1 420 321 0 21 chr10 129511342 129511358 -10805407 + MER5A DNA MER1_type 1 12 -177 250 286 26 62 chr10 129511358 129511550 -10805215 - MER5A DNA MER1_type -2 187 3 467 248 155 56 chr10 129512042 129512365 -10804400 - MLT1F1 LTR MaLR -45 522 191 2296 176 95 17 chr10 129512490 129512972 -10803793 - L1MB5 LINE L1 0 6174 5655 1947 155 18 9 chr10 129512982 129513311 -10803454 - Tigger1 DNA MER2_type -7 2411 2080 * 8356 119 37 27 chr10 129513305 129513895 -10802870 - Tigger1 DNA MER2_type -575 1843 1261 2084 114 13 34 chr10 129513895 129514193 -10802572 + AluSx SINE Alu 1 292 -20 8356 119 37 27 chr10 129514193 129514966 -10801799 - Tigger1 DNA MER2_type -1157 1261 466 1529 149 0 13 chr10 129514971 129515199 -10801566 + AluJo SINE Alu 1 225 -87 557 138 0 0 chr10 129515199 129515279 -10801486 - Tigger1 DNA MER2_type -2334 84 5 2270 162 59 34 chr10 129515279 129516142 -10800623 - L1MB5 LINE L1 -526 5648 4776 796 201 61 36 chr10 129516669 129516947 -10799818 - L1MC5 LINE L1 -431 7530 7246 432 301 59 43 chr10 129517031 129517287 -10799478 + MIR SINE MIR 3 262 0 22 0 0 0 chr10 129518384 129518406 -10798359 + AT_rich Low_complexity Low_complexity 1 22 0 2451 65 7 10 chr10 129521030 129521336 -10795429 - AluY SINE Alu -2 309 5 278 286 65 0 chr10 129522271 129522348 -10794417 - L2 LINE L2 -27 3245 3164 192 40 0 0 chr10 129522776 129522801 -10793964 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 579 286 178 53 chr10 129523937 129524573 -10792192 + HAL1 LINE L1 156 870 -1637 2161 120 17 0 chr10 129525151 129525443 -10791322 - AluSq SINE Alu -16 297 1 360 308 100 13 chr10 129525503 129525664 -10791101 - MIR SINE MIR -27 235 62 603 250 81 3 chr10 129527110 129527331 -10789434 - LTR33A LTR ERVL -17 778 300 323 232 126 60 chr10 129527424 129527575 -10789190 - LTR50 LTR ERVL -579 216 56 573 287 38 17 chr10 129527661 129527950 -10788815 + L1ME4a LINE L1 5534 5828 -293 246 307 136 0 chr10 129529305 129529445 -10787320 + MIR SINE MIR 100 258 -4 28 79 0 0 chr10 129529851 129529914 -10786851 + AT_rich Low_complexity Low_complexity 1 63 0 415 189 234 41 chr10 129529999 129530243 -10786522 - L1ME4a LINE L1 -213 5908 5618 4109 190 70 34 chr10 129530674 129531729 -10785036 + L1MD2 LINE L1 5254 6346 -13 377 252 93 13 chr10 129532531 129532617 -10784148 + MIR SINE MIR 79 157 -105 185 0 0 39 chr10 129532617 129532643 -10784122 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 377 252 93 13 chr10 129532643 129532707 -10784058 + MIR SINE MIR 157 241 -21 1182 204 116 37 chr10 129533513 129534042 -10782723 + L1MC4 LINE L1 7272 7898 -144 497 209 47 0 chr10 129534125 129534273 -10782492 + L1MC4 LINE L1 5304 5458 -2350 2918 214 101 15 chr10 129534337 129535179 -10781586 + L1MC4 LINE L1 6788 7701 -341 3500 143 32 40 chr10 129535404 129536081 -10780684 - L1MC1 LINE L1 -1 6332 5661 478 303 73 14 chr10 129536259 129536477 -10780288 + MIR SINE MIR 24 254 -8 635 278 23 12 chr10 129537230 129537403 -10779362 + MIR SINE MIR 6 180 -82 1542 187 115 9 chr10 129538429 129538760 -10778005 + MER47A DNA MER2_type 1 366 0 344 275 11 0 chr10 129539067 129539158 -10777607 - MIR SINE MIR -122 140 49 236 218 39 0 chr10 129539338 129539416 -10777349 - MER96 DNA MER1_type? -92 83 3 688 257 22 17 chr10 129540150 129540329 -10776436 + MIR SINE MIR 59 238 -24 2057 122 39 0 chr10 129540907 129541193 -10775572 - AluJb SINE Alu -15 297 1 259 255 11 53 chr10 129541222 129541316 -10775449 - MER117 DNA MER1_type -105 92 3 1637 174 60 0 chr10 129541664 129541946 -10774819 + AluJb SINE Alu 3 301 -11 486 199 50 50 chr10 129542369 129542510 -10774255 - MIR3 SINE MIR -65 143 3 395 270 70 0 chr10 129543730 129543845 -10772920 + L2 LINE L2 3150 3272 0 2219 112 3 34 chr10 129544987 129545308 -10771457 + AluSx SINE Alu 1 311 -1 854 128 8 0 chr10 129545372 129545497 -10771268 - FLAM_A SINE Alu -5 137 12 1213 179 100 67 chr10 129545858 129546080 -10770685 - MER58B DNA MER1_type -2079 341 103 1689 84 17 8 chr10 129546080 129546318 -10770447 + L1PB1 LINE L1 5911 6150 -1 1213 179 100 67 chr10 129546318 129546425 -10770340 - MER58B DNA MER1_type -2317 103 1 2336 107 3 3 chr10 129547249 129547559 -10769206 - AluSx SINE Alu -2 310 1 856 219 27 16 chr10 129547627 129547814 -10768951 + MIR SINE MIR 46 234 -28 365 280 25 0 chr10 129547892 129548010 -10768755 - MIR SINE MIR -111 151 31 690 304 68 7 chr10 129549090 129549386 -10767379 + L2 LINE L2 2422 2735 -579 183 283 150 120 chr10 129549508 129549882 -10766883 + L2 LINE L2 2923 3307 -6 * 273 253 53 120 chr10 129549879 129550029 -10766736 + MIR SINE MIR 105 244 -18 235 0 57 0 chr10 129551520 129551555 -10765210 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 278 235 107 9 chr10 129553464 129553570 -10763195 - MIR SINE MIR -63 145 52 453 266 179 10 chr10 129553787 129553994 -10762771 + MIR SINE MIR 15 256 -6 260 290 21 11 chr10 129555322 129555415 -10761350 - MIR SINE MIR -78 184 91 238 326 191 7 chr10 129556772 129556913 -10759852 - L2 LINE L2 -4 3268 3102 268 310 185 30 chr10 129557005 129557237 -10759528 - MLT1L LTR MaLR 0 615 348 303 28 0 0 chr10 129557622 129557658 -10759107 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 425 366 17 12 chr10 129558438 129558610 -10758155 + MIR3 SINE MIR 17 189 -19 364 256 43 0 chr10 129559413 129559530 -10757235 - L2 LINE L2 -2293 1021 900 1445 216 172 5 chr10 129559530 129559955 -10756810 - MER45C DNA AcHobo 0 953 458 448 217 42 17 chr10 129560126 129560246 -10756519 - MER45C DNA AcHobo -719 234 112 290 256 80 8 chr10 129560501 129560626 -10756139 - L2 LINE L2 -2425 889 756 192 77 0 0 chr10 129560827 129560853 -10755912 + (GGAGAA)n Simple_repeat Simple_repeat 5 30 0 202 298 18 0 chr10 129561191 129561248 -10755517 + L2 LINE L2 3256 3313 0 25 31 0 0 chr10 129561715 129561747 -10755018 + AT_rich Low_complexity Low_complexity 1 32 0 428 296 191 41 chr10 129562267 129562581 -10754184 + L2 LINE L2 2953 3313 0 198 0 0 0 chr10 129562764 129562786 -10753979 + (A)n Simple_repeat Simple_repeat 1 22 0 1043 231 19 5 chr10 129562941 129563157 -10753608 - MER58A DNA MER1_type -2 222 4 180 257 99 72 chr10 129564914 129565218 -10751547 - L2 LINE L2 -157 3115 2804 2194 124 7 0 chr10 129566378 129566684 -10750081 + AluSx SINE Alu 1 308 -4 369 222 0 0 chr10 129567778 129567850 -10748915 + MIR SINE MIR 80 151 -111 308 236 55 39 chr10 129568740 129568867 -10747898 - MER103 DNA DNA -17 149 21 2091 134 20 0 chr10 129570420 129570726 -10746039 - AluSx SINE Alu 0 312 1 1642 157 141 3 chr10 129571105 129571411 -10745354 + MER7A DNA MER2_type 1 346 0 383 203 109 43 chr10 129571844 129571982 -10744783 + MER5C DNA MER1_type 83 229 -95 218 232 0 12 chr10 129572009 129572091 -10744674 + (CA)n Simple_repeat Simple_repeat 2 82 0 333 271 0 0 chr10 129572106 129572272 -10744493 + (CA)n Simple_repeat Simple_repeat 2 167 0 282 326 7 30 chr10 129572686 129572821 -10743944 - MIR SINE MIR -46 216 85 260 284 0 25 chr10 129573456 129573537 -10743228 + MIR3 SINE MIR 118 196 -12 528 316 37 16 chr10 129574188 129574408 -10742357 + MIR SINE MIR 14 234 -28 1665 234 70 25 chr10 129574949 129575517 -10741248 + L1M4 LINE L1 4142 4735 -1411 2260 106 0 0 chr10 129576070 129576373 -10740392 - AluSg SINE Alu -7 303 1 2141 238 92 15 chr10 129576492 129576989 -10739776 + MER119 DNA MER1_type 1 545 -38 2299 113 48 22 chr10 129576989 129577344 -10739421 - THE1B LTR MaLR 0 364 1 2141 238 92 15 chr10 129577344 129577387 -10739378 + MER119 DNA MER1_type 545 583 0 677 295 112 10 chr10 129577502 129577797 -10738968 + MER69 DNA AcHobo 74 398 -2128 1110 226 37 37 chr10 129577906 129578260 -10738505 + MER69 DNA AcHobo 2169 2522 -4 355 284 84 26 chr10 129578818 129578973 -10737792 + MIR SINE MIR 60 223 -39 435 286 53 62 chr10 129579472 129579741 -10737024 - MIR SINE MIR 0 262 1 1007 185 6 0 chr10 129580036 129580209 -10736556 - MER45A DNA AcHobo 0 178 5 2493 56 0 0 chr10 129580326 129580630 -10736135 + AluY SINE Alu 1 304 -7 2338 86 0 0 chr10 129581755 129582057 -10734708 + AluY SINE Alu 1 302 -9 507 252 8 24 chr10 129584737 129584860 -10731905 + MIR3 SINE MIR 88 208 0 1791 185 66 3 chr10 129585075 129585454 -10731311 + L1MB7 LINE L1 5782 6184 0 290 162 44 0 chr10 129585471 129585539 -10731226 + Charlie5 DNA MER1_type 2540 2610 -2 228 294 67 46 chr10 129585630 129585824 -10730941 + MIR3 SINE MIR 1 198 -10 438 297 65 22 chr10 129586060 129586292 -10730473 + L1ME LINE L1 5534 5775 -346 1699 156 11 3 chr10 129586327 129586650 -10730115 + AluSx SINE Alu 1 325 0 268 278 32 56 chr10 129587306 129587432 -10729333 + MIR3 SINE MIR 81 203 -5 262 222 260 0 chr10 129588682 129588782 -10727983 - MIR SINE MIR -62 146 37 1487 225 6 8 chr10 129588830 129589194 -10727571 + L1M4 LINE L1 2539 2901 -3245 348 303 52 52 chr10 129589211 129589422 -10727343 + MIR SINE MIR 35 245 -17 330 67 0 0 chr10 129590565 129590610 -10726155 + (ATG)n Simple_repeat Simple_repeat 3 47 0 395 286 48 62 chr10 129590617 129590827 -10725938 - MIR SINE MIR -8 254 48 252 306 42 0 chr10 129590888 129590960 -10725805 + L2 LINE L2 3194 3268 -4 212 301 128 39 chr10 129591582 129591738 -10725027 - MIR3 SINE MIR -7 201 32 321 244 87 43 chr10 129592383 129592498 -10724267 + L2 LINE L2 3182 3301 -12 2226 65 0 7 chr10 129592543 129592833 -10723932 + AluY SINE Alu 4 291 -20 398 261 78 56 chr10 129593494 129593674 -10723091 + MIR SINE MIR 63 246 -16 215 317 144 11 chr10 129593926 129594187 -10722578 + L2 LINE L2 2776 3090 -223 198 143 0 0 chr10 129594442 129594477 -10722288 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 306 239 294 0 chr10 129595246 129595338 -10721427 + MIR SINE MIR 31 149 -113 1016 138 6 0 chr10 129595340 129595500 -10721265 + FRAM SINE Alu 1 160 -16 186 43 0 0 chr10 129597363 129597386 -10719379 + (CGG)n Simple_repeat Simple_repeat 2 24 0 263 301 7 7 chr10 129597508 129597644 -10719121 + G-rich Low_complexity Low_complexity 2 137 0 393 255 40 33 chr10 129599069 129599211 -10717554 - MIR3 SINE MIR -49 159 20 202 161 99 123 chr10 129599545 129599626 -10717139 + MIR SINE MIR 19 97 -111 190 145 161 16 chr10 129599840 129599902 -10716863 + L2 LINE L2 3162 3232 -40 238 330 29 10 chr10 129601099 129601202 -10715563 + L2 LINE L2 2707 2811 -503 311 294 88 0 chr10 129601458 129601560 -10715205 - L2 LINE L2 -9 3263 3153 702 190 51 0 chr10 129601560 129601697 -10715068 + MER3 DNA MER1_type 14 157 -52 253 231 172 64 chr10 129601906 129602109 -10714656 - L2 LINE L2 -428 2886 2662 2128 108 7 0 chr10 129602342 129602639 -10714126 - AluSx SINE Alu -13 299 1 276 111 0 0 chr10 129602684 129602729 -10714036 + (T)n Simple_repeat Simple_repeat 1 45 0 255 156 44 0 chr10 129602731 129602776 -10713989 - MER57A LTR ERV1 -67 336 290 882 177 19 0 chr10 129603858 129604016 -10712749 - MER5A DNA MER1_type 0 189 29 216 200 0 22 chr10 129604505 129604550 -10712215 + MER5B DNA MER1_type 25 68 -110 546 165 78 180 chr10 129604579 129604913 -10711852 + L1MC4 LINE L1 7743 8042 0 1323 181 57 4 chr10 129604915 129605180 -10711585 - AluJb SINE Alu -20 292 14 1904 136 0 17 chr10 129605199 129605501 -10711264 - AluJo SINE Alu -15 297 1 2105 123 0 0 chr10 129605527 129605836 -10710929 + AluSc SINE Alu 1 309 0 182 257 0 0 chr10 129605837 129605872 -10710893 + MER5A DNA MER1_type 82 116 -73 3717 171 28 66 chr10 129605876 129606484 -10710281 + L1MB8 LINE L1 5374 6004 -174 1253 181 46 46 chr10 129606484 129606605 -10710160 + AluJo SINE Alu 1 121 -191 238 25 25 25 chr10 129606605 129606645 -10710120 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 1253 181 46 46 chr10 129606645 129606805 -10709960 + AluJo SINE Alu 120 282 -30 3717 171 28 66 chr10 129606805 129606826 -10709939 + L1MB8 LINE L1 6004 6024 -154 2153 95 30 0 chr10 129606826 129607122 -10709643 + AluSx SINE Alu 1 305 -7 3717 171 28 66 chr10 129607122 129607204 -10709561 + L1MB8 LINE L1 6024 6052 -126 2064 97 35 0 chr10 129607204 129607492 -10709273 + AluSx SINE Alu 1 298 -14 3717 171 28 66 chr10 129607492 129607614 -10709151 + L1MB8 LINE L1 6052 6177 -1 188 173 37 111 chr10 129607625 129607706 -10709059 - MER5B DNA MER1_type -101 77 3 189 261 180 18 chr10 129607881 129607992 -10708773 + L2 LINE L2 3139 3267 -5 314 217 87 0 chr10 129608665 129608757 -10708008 + L1ME4a LINE L1 5971 6070 -51 190 208 19 75 chr10 129608934 129608987 -10707778 + L2 LINE L2 2895 2944 -328 677 220 27 14 chr10 129609307 129609489 -10707276 + L1MB8 LINE L1 5835 6018 -148 1054 282 90 27 chr10 129609540 129610129 -10706636 + L1M4 LINE L1 4753 5378 -768 1258 215 116 3 chr10 129610203 129610514 -10706251 + MLT1E1 LTR MaLR 1 346 -308 388 237 26 26 chr10 129610652 129610766 -10705999 + L2 LINE L2 3149 3262 -10 978 303 60 12 chr10 129611016 129611040 -10705725 + MLT1I LTR MaLR 44 65 -344 348 177 25 13 chr10 129611040 129611119 -10705646 + MER116 DNA Mariner 1 80 0 978 303 60 12 chr10 129611119 129611427 -10705338 + MLT1I LTR MaLR 65 392 -17 235 333 36 0 chr10 129611475 129611559 -10705206 + L2 LINE L2 3178 3264 -8 321 273 131 56 chr10 129611827 129612025 -10704740 - L2 LINE L2 -464 2850 2638 387 303 82 76 chr10 129612025 129612329 -10704436 + L1MB8 LINE L1 3390 3695 -2451 * 442 265 66 120 chr10 129612305 129612747 -10704018 + L1MB8 LINE L1 4178 4595 -1551 391 125 0 0 chr10 129613062 129613126 -10703639 + MER63 DNA MER1_type 73 136 -925 1269 201 54 4 chr10 129613151 129613430 -10703335 + MER58B DNA MER1_type 48 340 -1 2051 169 75 5 chr10 129613432 129613817 -10702948 + MER63 DNA MER1_type 649 1060 0 1892 196 16 11 chr10 129614141 129614504 -10702261 + MLT1A1 LTR MaLR 1 365 0 354 324 141 46 chr10 129614590 129615066 -10701699 + L1MB8 LINE L1 4643 5163 -983 285 226 141 43 chr10 129615134 129615368 -10701397 + L1MB8 LINE L1 5266 5522 -2286 1292 84 4 44 chr10 129615368 129615593 -10701172 - AluSp SINE Alu -16 297 82 1857 127 0 14 chr10 129615811 129616102 -10700663 - AluSx SINE Alu -23 289 3 504 258 45 43 chr10 129616125 129616147 -10700618 + L1MC/D LINE L1 5131 5151 -1032 2401 63 0 3 chr10 129616147 129616450 -10700315 - AluY SINE Alu -9 302 1 504 258 45 43 chr10 129616450 129616733 -10700032 + L1MC/D LINE L1 5151 5440 -743 278 238 39 87 chr10 129616761 129616967 -10699798 + L1MC5 LINE L1 7368 7563 -398 1177 170 9 14 chr10 129617324 129617581 -10699184 + AluJo SINE Alu 87 342 0 350 321 134 8 chr10 129617581 129617715 -10699050 + L1MC5 LINE L1 7739 7889 -72 1085 207 32 24 chr10 129617720 129617966 -10698799 + L1MC4 LINE L1 5387 5634 -2174 614 281 32 0 chr10 129618200 129618421 -10698344 + L1MC4 LINE L1 7142 7369 -673 923 181 104 48 chr10 129618475 129618745 -10698020 + L1MB8 LINE L1 5894 6178 0 2157 203 118 20 chr10 129618802 129619152 -10697613 + L2 LINE L2 2097 2524 -790 2207 115 128 11 chr10 129619152 129619534 -10697231 - MSTA LTR MaLR 0 428 2 2157 203 118 20 chr10 129619534 129619740 -10697025 + L2 LINE L2 2524 2708 -606 574 250 266 0 chr10 129619776 129619960 -10696805 - MIR SINE MIR -26 236 4 254 159 174 138 chr10 129619964 129619986 -10696779 + L2 LINE L2 2728 2748 -566 738 151 16 109 chr10 129619986 129620178 -10696587 + MER5B DNA MER1_type 1 174 -4 254 159 174 138 chr10 129620178 129620293 -10696472 + L2 LINE L2 2748 2870 -444 853 253 30 66 chr10 129620342 129620646 -10696119 + L2 LINE L2 3020 3312 -1 1864 156 0 9 chr10 129622091 129622406 -10694359 - AluJb SINE Alu 0 312 1 280 310 10 20 chr10 129622632 129622732 -10694033 + L3 LINE CR1 1473 1571 -6 21 0 0 0 chr10 129623466 129623487 -10693278 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 129623737 129623765 -10693000 + AT_rich Low_complexity Low_complexity 1 28 0 281 68 23 0 chr10 129624306 129624350 -10692415 + (TA)n Simple_repeat Simple_repeat 2 46 0 214 158 105 92 chr10 129625336 129625412 -10691353 + MIR SINE MIR 30 106 -102 28 61 0 0 chr10 129625686 129625735 -10691030 + GC_rich Low_complexity Low_complexity 1 49 0 516 288 105 34 chr10 129626684 129627007 -10689758 - L2 LINE L2 0 3313 2968 193 213 43 0 chr10 129627018 129627065 -10689700 + L2 LINE L2 3253 3301 -12 241 338 31 44 chr10 129627461 129627621 -10689144 + MIR SINE MIR 72 229 -33 231 178 0 0 chr10 129627887 129627932 -10688833 + Charlie8 DNA MER1_type 2373 2417 0 1791 117 83 0 chr10 129628182 129628446 -10688319 + AluSx SINE Alu 9 294 -18 187 320 40 0 chr10 129628506 129628581 -10688184 - MIR SINE MIR -68 140 63 2031 119 6 32 chr10 129628883 129629194 -10687571 - AluSx SINE Alu -9 303 1 186 232 107 0 chr10 129629264 129629320 -10687445 - L2 LINE L2 -5 3308 3247 413 248 32 32 chr10 129629430 129629587 -10687178 + L2 LINE L2 3108 3264 -49 2416 81 7 16 chr10 129630760 129631069 -10685696 + AluSg SINE Alu 5 310 0 271 275 66 22 chr10 129631139 129631230 -10685535 + MIR SINE MIR 35 129 -79 208 233 0 0 chr10 129631609 129631652 -10685113 - MER5B DNA MER1_type -124 54 12 286 282 97 10 chr10 129632488 129632591 -10684174 + MER5B DNA MER1_type 19 130 -48 2620 195 117 8 chr10 129632617 129633269 -10683496 - L1ME3 LINE L1 -8 6154 5432 267 271 0 0 chr10 129633269 129633328 -10683437 - MER5B DNA MER1_type -116 62 4 265 332 261 0 chr10 129633718 129634028 -10682737 + L2 LINE L2 2398 2788 -526 1413 210 36 57 chr10 129634144 129634266 -10682499 - L1ME1 LINE L1 -5 6161 6038 2243 111 3 13 chr10 129634266 129634564 -10682201 + AluSx SINE Alu 3 297 -15 1413 210 36 57 chr10 129634564 129634883 -10681882 - L1ME1 LINE L1 -128 6038 5729 253 318 135 12 chr10 129636153 129636323 -10680442 + MIR SINE MIR 34 224 -38 241 346 19 28 chr10 129636700 129636807 -10679958 - L2 LINE L2 -508 2806 2701 418 341 78 0 chr10 129637143 129637322 -10679443 + MIR SINE MIR 20 212 -50 680 296 77 5 chr10 129637353 129637573 -10679192 + MIR SINE MIR 20 255 -7 324 148 0 0 chr10 129637675 129637736 -10679029 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 415 266 7 14 chr10 129637746 129637885 -10678880 + (TGAA)n Simple_repeat Simple_repeat 1 138 0 271 240 260 47 chr10 129638857 129639007 -10677758 - MIR SINE MIR -27 235 54 489 17 0 0 chr10 129639078 129639136 -10677629 + (CA)n Simple_repeat Simple_repeat 2 59 0 374 284 63 16 chr10 129639793 129639920 -10676845 - HAL1b LINE L1 -23 1325 1193 3477 182 112 33 chr10 129639978 129640561 -10676204 - L1MD2 LINE L1 -1 6358 5685 2144 113 7 0 chr10 129640561 129640871 -10675894 + AluSq SINE Alu 1 312 0 3477 182 112 33 chr10 129640871 129641131 -10675634 - L1MD2 LINE L1 -674 5685 5447 2707 212 104 94 chr10 129641134 129641249 -10675516 - L1MDa LINE L1 -4496 2044 1932 2149 130 0 19 chr10 129641249 129641565 -10675200 - AluSx SINE Alu -2 310 1 2707 212 104 94 chr10 129641565 129642112 -10674653 - L1MDa LINE L1 -4608 1932 1392 842 197 0 0 chr10 129642112 129642249 -10674516 - AluJb SINE Alu -19 293 157 2707 212 104 94 chr10 129642249 129643393 -10673372 - L1MDa LINE L1 -5148 1392 99 880 275 13 17 chr10 129643886 129644119 -10672646 + MIR SINE MIR 31 262 0 311 298 140 83 chr10 129645031 129645430 -10671335 - L2 LINE L2 -11 3302 2881 2425 79 0 3 chr10 129645551 129645842 -10670923 - AluSq SINE Alu -23 290 1 2621 153 12 25 chr10 129646317 129646389 -10670376 - MSTB LTR MaLR 0 426 355 2311 100 3 0 chr10 129646389 129646690 -10670075 + AluY SINE Alu 1 302 -9 2621 153 12 25 chr10 129646690 129647049 -10669716 - MSTB LTR MaLR -71 355 1 909 220 16 0 chr10 129647479 129647665 -10669100 + MER5A DNA MER1_type 1 189 0 314 305 53 33 chr10 129647829 129647980 -10668785 + MIR SINE MIR 31 184 -78 2056 120 25 0 chr10 129648038 129648322 -10668443 - AluSx SINE Alu -21 291 1 410 244 269 41 chr10 129648794 129649036 -10667729 + MER5C DNA MER1_type 9 305 -19 963 157 41 0 chr10 129650823 129650995 -10665770 - MLT1D LTR MaLR 0 505 327 1111 208 25 0 chr10 129651030 129651271 -10665494 - MLT1D LTR MaLR -258 247 1 277 272 11 33 chr10 129651317 129651409 -10665356 - MIR SINE MIR -74 134 45 432 290 92 45 chr10 129652643 129652959 -10663806 - L1ME4a LINE L1 -170 5951 5610 1329 247 83 42 chr10 129652959 129653486 -10663279 - MLT1H LTR MaLR 0 549 1 432 290 92 45 chr10 129653486 129653573 -10663192 - L1ME4a LINE L1 -511 5610 5529 2442 150 106 2 chr10 129653785 129654191 -10662574 + MER83 LTR ERV1 1 448 0 204 150 0 0 chr10 129654505 129654514 -10662251 + (T)n Simple_repeat Simple_repeat 1 9 -31 2183 193 33 13 chr10 129654514 129654964 -10661801 - L1MB7 LINE L1 0 6184 5726 204 150 0 0 chr10 129654964 129654994 -10661771 + (T)n Simple_repeat Simple_repeat 8 40 0 641 155 29 0 chr10 129655011 129655114 -10661651 - U6 snRNA snRNA 0 107 2 924 169 0 12 chr10 129655114 129655267 -10661498 - FRAM SINE Alu -148 164 12 1109 198 32 8 chr10 129655319 129655566 -10661199 - L1MB7 LINE L1 -435 5743 5491 321 240 132 25 chr10 129655755 129655876 -10660889 + L2 LINE L2 3138 3271 -1 242 208 0 0 chr10 129656036 129656084 -10660681 + MER66A LTR ERV1 290 337 -141 260 240 13 0 chr10 129656106 129656181 -10660584 + MER3 DNA MER1_type 99 127 -82 596 218 17 5 chr10 129656470 129656680 -10660085 - MER3 DNA MER1_type -80 129 1 393 267 23 53 chr10 129657127 129657258 -10659507 - MIR3 SINE MIR -3 205 79 571 280 150 10 chr10 129657310 129657517 -10659248 - MIR SINE MIR 0 262 27 395 315 42 6 chr10 129658230 129658395 -10658370 + MER5A DNA MER1_type 16 186 -3 344 327 111 0 chr10 129658693 129658769 -10657996 + MIR SINE MIR 33 99 -163 1960 134 0 0 chr10 129658769 129659030 -10657735 - AluSx SINE Alu -51 261 1 344 327 111 0 chr10 129659030 129659115 -10657650 + MIR SINE MIR 99 212 -50 252 259 106 0 chr10 129659129 129659214 -10657551 + MIR3 SINE MIR 101 194 -14 2113 153 0 6 chr10 129659959 129660273 -10656492 - AluJb SINE Alu 0 312 1 732 259 89 19 chr10 129660526 129660796 -10655969 + L1ME3A LINE L1 5821 6109 -61 692 211 7 0 chr10 129660798 129660940 -10655825 + MER96B DNA MER1_type? 273 415 -2 696 296 94 35 chr10 129661028 129661453 -10655312 - LTR33A LTR ERVL -8 515 66 1755 255 41 19 chr10 129661687 129662227 -10654538 + MLT1E LTR MaLR 39 591 -2 237 220 0 51 chr10 129662886 129662945 -10653820 - MER5B DNA MER1_type -3 175 120 445 268 4 101 chr10 129662950 129663066 -10653699 - L1ME2 LINE L1 -7 6157 6071 2133 70 0 4 chr10 129663066 129663360 -10653405 + AluY SINE Alu 28 320 0 445 268 4 101 chr10 129663360 129663470 -10653295 - L1ME2 LINE L1 -93 6071 5952 471 268 35 28 chr10 129663475 129663617 -10653148 - MER5B DNA MER1_type -34 144 2 366 281 11 0 chr10 129664697 129664786 -10651979 - MIR SINE MIR -82 126 37 192 182 0 0 chr10 129664789 129664833 -10651932 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 593 146 0 0 chr10 129664849 129664945 -10651820 + AluSg/x SINE Alu 213 308 -2 184 336 164 10 chr10 129664945 129665049 -10651716 - L2 LINE L2 -28 3244 3125 231 213 0 0 chr10 129665073 129665120 -10651645 + (CAT)n Simple_repeat Simple_repeat 3 49 0 544 254 48 24 chr10 129665132 129665297 -10651468 - MIR SINE MIR -21 241 73 299 255 39 98 chr10 129665599 129665752 -10651013 + MIR SINE MIR 119 262 0 2346 105 0 46 chr10 129665984 129666309 -10650456 + AluSx SINE Alu 3 312 0 2600 63 0 0 chr10 129666309 129666609 -10650156 + AluY SINE Alu 1 300 -11 286 268 72 41 chr10 129668511 129668608 -10648157 - L2 LINE L2 0 3313 3214 577 260 99 17 chr10 129671135 129671316 -10645449 - MIR SINE MIR -54 208 13 625 253 22 0 chr10 129671447 129671625 -10645140 + MER5A DNA MER1_type 1 182 -7 282 241 256 0 chr10 129671875 129672008 -10644757 + MIR SINE MIR 14 180 -82 387 269 17 17 chr10 129672020 129672139 -10644626 - L2 LINE L2 -1 3312 3194 217 245 166 33 chr10 129672393 129672544 -10644221 - L2 LINE L2 -467 2847 2677 1580 182 26 18 chr10 129672917 129673258 -10643507 + L1PA16 LINE L1 5802 6145 -21 206 271 0 0 chr10 129675276 129675324 -10641441 - L2 LINE L2 0 3313 3266 1979 130 3 20 chr10 129676269 129676569 -10640196 - AluJo SINE Alu -1 311 17 1123 171 0 6 chr10 129676914 129677090 -10639675 + FAM SINE Alu 1 175 0 433 295 13 38 chr10 129677570 129677790 -10638975 + MIR SINE MIR 34 247 -15 2449 77 0 6 chr10 129677842 129678153 -10638612 - AluSx SINE Alu -3 309 1 489 264 119 7 chr10 129679042 129679238 -10637527 - MIR SINE MIR -26 236 16 1395 209 67 28 chr10 129680455 129680842 -10635923 - MLT1C LTR MaLR -8 459 58 412 261 102 81 chr10 129681194 129681477 -10635288 - L1MC4a LINE L1 -218 5903 5612 1489 208 140 53 chr10 129681477 129681723 -10635042 - MER90 LTR ERV1 0 575 352 1333 39 0 0 chr10 129681723 129681877 -10634888 + L1PA4 LINE L1 5999 6152 -3 1489 208 140 53 chr10 129681877 129682159 -10634606 - MER90 LTR ERV1 -223 352 1 227 265 15 0 chr10 129682159 129682227 -10634538 - L1MC4a LINE L1 -503 5618 5550 4928 166 23 26 chr10 129684401 129684461 -10632304 - L1MB2 LINE L1 -27 6380 6321 1550 176 36 13 chr10 129684461 129684762 -10632003 - AluJo SINE Alu -4 308 1 4928 166 23 26 chr10 129684762 129685801 -10630964 - L1MB2 LINE L1 -86 6321 5294 2052 109 9 50 chr10 129685806 129686128 -10630637 - AluSq SINE Alu -4 309 1 1371 153 18 5 chr10 129686139 129686362 -10630403 + AluJo SINE Alu 85 310 -2 3585 197 76 8 chr10 129686373 129687211 -10629554 - L1MB2 LINE L1 -1086 5296 4402 1678 173 0 4 chr10 129687297 129687563 -10629202 - AluJo SINE Alu -43 269 5 3493 227 32 32 chr10 129687630 129688859 -10627906 - L1MB2 LINE L1 -4514 1870 795 475 314 62 74 chr10 129688988 129689396 -10627369 - L1M3de LINE L1 -5213 678 12 330 229 83 0 chr10 129689605 129689701 -10627064 - MIR SINE MIR -112 150 47 2746 158 48 50 chr10 129690458 129691016 -10625749 - MER74A LTR ERVL 0 558 2 235 286 26 39 chr10 129691511 129691588 -10625177 - MIR SINE MIR -63 145 70 2232 112 3 0 chr10 129691607 129691901 -10624864 - AluSx SINE Alu -15 297 3 317 260 40 10 chr10 129691965 129692065 -10624700 - FRAM SINE Alu 0 166 64 292 325 107 15 chr10 129692595 129692801 -10623964 + L1MC/D LINE L1 5335 5559 -2249 1175 160 42 5 chr10 129693374 129693586 -10623179 + AluSg/x SINE Alu 84 303 -9 21 36 0 0 chr10 129693950 129693978 -10622787 + AT_rich Low_complexity Low_complexity 1 28 0 405 271 102 5 chr10 129694484 129694642 -10622123 - MIR SINE MIR -54 208 35 276 308 0 0 chr10 129695059 129695124 -10621641 + L2 LINE L2 3206 3270 -2 205 292 10 62 chr10 129695156 129695252 -10621513 - MIR SINE MIR -59 203 113 1551 138 132 3 chr10 129697822 129698133 -10618632 + L1MB3 LINE L1 5833 6183 0 2276 105 0 0 chr10 129698335 129698630 -10618135 + AluSx SINE Alu 1 295 -17 238 198 30 139 chr10 129698862 129698963 -10617802 - MIR3 SINE MIR -104 104 15 * 403 286 75 0 chr10 129698943 129699076 -10617689 + L2 LINE L2 3171 3313 0 517 324 39 6 chr10 129700421 129700600 -10616165 + MIR3 SINE MIR 15 199 -9 720 237 124 34 chr10 129701961 129702315 -10614450 + L1M4 LINE L1 2958 3343 -2803 6202 136 28 5 chr10 129702323 129703453 -10613312 + L1PA16 LINE L1 4991 6157 -9 1921 183 29 0 chr10 129703501 129703884 -10612881 + L1ME1 LINE L1 2710 3103 -3043 * 5500 211 54 13 chr10 129703873 129705443 -10611322 + L1ME1 LINE L1 3910 5577 -589 2284 85 0 0 chr10 129705443 129705726 -10611039 + AluSx SINE Alu 19 301 -11 5500 211 54 13 chr10 129705726 129706098 -10610667 + L1ME1 LINE L1 5577 5932 -234 3935 121 85 63 chr10 129706104 129706634 -10610131 + Tigger3b DNA MER2_type 1 557 -2471 2578 68 0 0 chr10 129706634 129706945 -10609820 - AluY SINE Alu 0 311 1 3935 121 85 63 chr10 129706945 129707222 -10609543 + Tigger3b DNA MER2_type 557 826 -405 1078 161 0 11 chr10 129707222 129707396 -10609369 + AluSp SINE Alu 1 172 -141 2376 91 10 0 chr10 129707953 129708250 -10608515 + AluSx SINE Alu 1 300 -12 452 157 0 59 chr10 129709023 129709125 -10607640 + L1MC4 LINE L1 7246 7341 -701 923 198 96 0 chr10 129709459 129709646 -10607119 + MER3 DNA MER1_type 1 205 -4 275 282 147 95 chr10 129709674 129709926 -10606839 + L2 LINE L2 3007 3271 -1 323 258 65 32 chr10 129710113 129710237 -10606528 - L2 LINE L2 -2 3311 3184 203 243 14 27 chr10 129710925 129710999 -10605766 + (CACCC)n Simple_repeat Simple_repeat 3 75 0 189 0 0 0 chr10 129711193 129711214 -10605551 + (T)n Simple_repeat Simple_repeat 1 21 0 2046 128 23 7 chr10 129712460 129712766 -10603999 + AluSx SINE Alu 1 311 -1 369 235 129 0 chr10 129712916 129713048 -10603717 - L1ME4a LINE L1 -181 5940 5792 22 0 0 0 chr10 129715539 129715561 -10601204 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 129715632 129715663 -10601102 + AT_rich Low_complexity Low_complexity 1 31 0 866 65 24 0 chr10 129715983 129716106 -10600659 + AluY SINE Alu 177 302 -9 348 317 35 25 chr10 129716109 129716311 -10600454 + L1ME4a LINE L1 5725 5928 -193 325 222 111 23 chr10 129716460 129716631 -10600134 + L1ME4a LINE L1 5936 6121 0 21 0 0 0 chr10 129717255 129717276 -10599489 + AT_rich Low_complexity Low_complexity 1 21 0 787 190 31 43 chr10 129717321 129717484 -10599281 - MER105 DNA DNA 0 204 44 1724 159 20 20 chr10 129717497 129717792 -10598973 - AluJb SINE Alu -17 295 1 936 191 28 6 chr10 129717794 129717972 -10598793 - MER5A DNA MER1_type -7 182 1 210 322 44 0 chr10 129718457 129718547 -10598218 - L2 LINE L2 -276 3037 2944 924 302 67 47 chr10 129718997 129719227 -10597538 + L1M4 LINE L1 3348 3572 -2574 2210 99 0 30 chr10 129719227 129719530 -10597235 - AluSq SINE Alu -19 294 1 924 302 67 47 chr10 129719530 129719986 -10596779 + L1M4 LINE L1 3572 4053 -2093 1854 61 13 13 chr10 129719986 129720216 -10596549 - MER30 DNA MER1_type 0 230 1 924 302 67 47 chr10 129720216 129720287 -10596478 + L1M4 LINE L1 4053 4121 -2025 442 251 147 0 chr10 129720288 129720451 -10596314 + L2 LINE L2 1220 1406 -1908 2786 246 141 30 chr10 129720558 129720826 -10595939 + L2 LINE L2 1384 1621 -1693 1957 159 10 3 chr10 129720826 129721134 -10595631 - AluJb SINE Alu -2 310 1 2786 246 141 30 chr10 129721134 129721902 -10594863 + L2 LINE L2 1621 2535 -779 180 0 0 0 chr10 129722097 129722117 -10594648 + (A)n Simple_repeat Simple_repeat 1 20 0 869 178 24 18 chr10 129723031 129723200 -10593565 + L1MD1 LINE L1 6003 6172 -70 739 200 0 0 chr10 129723200 129723325 -10593440 - FLAM_A SINE Alu -3 139 15 339 125 0 0 chr10 129723484 129723540 -10593225 + L1MD2 LINE L1 6293 6348 -11 333 0 0 0 chr10 129724467 129724504 -10592261 + (TG)n Simple_repeat Simple_repeat 2 38 0 2194 113 3 0 chr10 129726099 129726392 -10590373 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 129727083 129727105 -10589660 + AT_rich Low_complexity Low_complexity 1 22 0 242 311 15 45 chr10 129728226 129728358 -10588407 - MIR3 SINE MIR -23 185 58 205 318 119 40 chr10 129729371 129729522 -10587243 + MIR SINE MIR 29 191 -71 3360 32 22 0 chr10 129729549 129729956 -10586809 - L1PA3 LINE L1 0 6155 5740 2005 148 9 15 chr10 129781518 129781843 -10534922 - THE1B LTR MaLR -41 323 1 346 312 108 6 chr10 129781944 129782101 -10534664 - MIR SINE MIR -27 235 63 23 33 0 0 chr10 129782270 129782300 -10534465 + AT_rich Low_complexity Low_complexity 1 30 0 864 160 45 13 chr10 129782596 129782752 -10534013 + FRAM SINE Alu 10 170 -6 21 0 0 0 chr10 129783601 129783622 -10533143 + AT_rich Low_complexity Low_complexity 1 21 0 377 212 38 0 chr10 129784203 129784609 -10532156 + (CA)n Simple_repeat Simple_repeat 1 421 0 181 297 27 14 chr10 129785623 129785697 -10531068 + L2 LINE L2 3238 3312 -1 212 184 39 0 chr10 129786682 129786785 -10529980 + (CA)n Simple_repeat Simple_repeat 1 107 0 359 176 36 6 chr10 129786818 129786983 -10529782 + (CA)n Simple_repeat Simple_repeat 1 170 0 195 199 26 32 chr10 129787043 129787199 -10529566 + (CA)n Simple_repeat Simple_repeat 1 155 0 2378 82 0 3 chr10 129787742 129788033 -10528732 - AluY SINE Alu -21 290 1 217 246 0 0 chr10 129788368 129788425 -10528340 + A-rich Low_complexity Low_complexity 1 57 0 208 321 46 9 chr10 129788685 129788794 -10527971 - MER5A DNA MER1_type -4 185 73 1421 121 0 60 chr10 129789231 129789502 -10527263 + AluSx SINE Alu 52 307 0 325 296 106 50 chr10 129789528 129789707 -10527058 - MER5A DNA MER1_type 0 189 1 293 328 161 0 chr10 129789858 129790032 -10526733 - MIR SINE MIR -43 219 18 298 316 53 16 chr10 129790469 129790659 -10526106 + MIR SINE MIR 66 262 0 537 220 17 0 chr10 129791370 129791488 -10525277 - MER45A DNA AcHobo 0 178 59 1105 147 76 0 chr10 129792564 129792748 -10524017 + MER20 DNA MER1_type 22 219 0 255 309 132 13 chr10 129793795 129793947 -10522818 + MIR3 SINE MIR 17 186 -22 224 305 11 42 chr10 129794623 129794718 -10522047 + MIR SINE MIR 71 162 -100 31 26 0 0 chr10 129796229 129796267 -10520498 + AT_rich Low_complexity Low_complexity 1 38 0 376 225 9 54 chr10 129796689 129796800 -10519965 + MIR SINE MIR 20 125 -83 1787 170 0 13 chr10 129796996 129797308 -10519457 + AluJo SINE Alu 1 308 -4 647 24 0 12 chr10 129797485 129797567 -10519198 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 411 335 83 17 chr10 129798025 129798255 -10518510 - MIR SINE MIR 0 262 18 301 278 33 60 chr10 129800537 129800688 -10516077 + MIR SINE MIR 46 192 -70 2200 83 0 17 chr10 129801886 129802176 -10514589 + AluY SINE Alu 27 311 0 528 309 68 26 chr10 129802861 129803172 -10513593 - L2 LINE L2 -1 3312 2989 267 31 0 0 chr10 129803508 129803540 -10513225 + (CATAA)n Simple_repeat Simple_repeat 3 34 0 304 241 68 19 chr10 129803555 129803670 -10513095 + MIR SINE MIR 38 156 -66 274 254 120 82 chr10 129803851 129804217 -10512548 - L1ME4a LINE L1 -11 6110 5731 215 284 0 0 chr10 129805065 129805132 -10511633 - MIR SINE MIR -161 101 35 189 319 29 0 chr10 129805257 129805326 -10511439 + L2 LINE L2 79 149 -3165 302 281 94 52 chr10 129805601 129805793 -10510972 - MIR SINE MIR -42 220 21 743 178 5 92 chr10 129807346 129807531 -10509234 - MER5B DNA MER1_type 0 178 10 2228 147 98 9 chr10 129807815 129808244 -10508521 - MLT1C LTR MaLR 0 467 1 193 306 14 0 chr10 129809993 129810065 -10506700 + MIR SINE MIR 184 256 -6 192 40 0 0 chr10 129810288 129810313 -10506452 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 195 274 0 65 chr10 129810328 129810390 -10506375 + MIR SINE MIR 83 140 -122 367 243 228 0 chr10 129812617 129812753 -10504012 - MER5A DNA MER1_type 0 189 23 304 178 119 59 chr10 129812796 129812897 -10503868 + MER5A DNA MER1_type 3 109 -80 834 245 60 18 chr10 129813066 129813368 -10503397 + L1ME1 LINE L1 5850 6162 -4 797 156 1 1 chr10 129813944 129814079 -10502686 + L1PA15 LINE L1 5514 5648 -517 785 260 55 29 chr10 129814233 129814506 -10502259 + L1PA15 LINE L1 5886 6165 0 368 129 30 3 chr10 129814597 129814738 -10502027 - MER53 DNA DNA 0 189 3 262 140 18 88 chr10 129814738 129814782 -10501983 - MER63 DNA MER1_type -1021 40 1 2220 108 3 3 chr10 129814952 129815248 -10501517 - AluSc SINE Alu -13 296 1 287 188 119 59 chr10 129816199 129816300 -10500465 - MER5A DNA MER1_type -80 109 3 348 195 263 0 chr10 129816337 129816455 -10500310 + MER5A DNA MER1_type 41 189 0 191 273 36 127 chr10 129817185 129817350 -10499415 - MIR SINE MIR -65 197 48 202 355 56 0 chr10 129819514 129819621 -10497144 + L2 LINE L2 3190 3302 -11 663 172 192 7 chr10 129820517 129820668 -10496097 - MER20 DNA MER1_type -40 179 1 2453 65 0 0 chr10 129820776 129821067 -10495698 - AluY SINE Alu -20 291 1 384 77 0 0 chr10 129821212 129821264 -10495501 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 0 0 0 chr10 129821311 129821334 -10495431 + AT_rich Low_complexity Low_complexity 1 23 0 997 32 0 24 chr10 129822260 129822408 -10494357 - L1PA4 LINE L1 0 6155 6033 277 284 21 21 chr10 129822665 129822760 -10494005 + MIR SINE MIR 19 113 -95 256 222 0 28 chr10 129822839 129822911 -10493854 - MIR SINE MIR -6 256 187 22 70 0 0 chr10 129822911 129822954 -10493811 + AT_rich Low_complexity Low_complexity 1 43 0 925 279 5 0 chr10 129822979 129823201 -10493564 - MER58A DNA MER1_type -1 223 1 436 252 43 0 chr10 129823219 129823334 -10493431 - MIR SINE MIR -46 216 97 823 310 60 41 chr10 129823393 129824102 -10492663 + L2 LINE L2 2425 3150 -163 2219 117 0 0 chr10 129824107 129824406 -10492359 - AluSx SINE Alu -10 302 4 355 211 11 0 chr10 129824863 129824953 -10491812 - L1MD3 LINE L1 -907 7088 6998 214 309 36 18 chr10 129825032 129825142 -10491623 + L3 LINE CR1 1263 1374 -203 2147 129 0 16 chr10 129825167 129825478 -10491287 - AluSx SINE Alu -6 306 1 300 152 0 0 chr10 129827218 129827264 -10489501 - MER69 DNA AcHobo -2 2524 2479 493 167 87 120 chr10 129827321 129827471 -10489294 - MER69 DNA AcHobo -1081 145 1 633 158 0 0 chr10 129827631 129827726 -10489039 - MER81 DNA DNA -19 95 1 1830 138 16 44 chr10 129828047 129828367 -10488398 - AluJo SINE Alu -1 311 1 271 338 101 10 chr10 129828491 129828661 -10488104 - MIR SINE MIR -15 247 54 2118 89 78 5 chr10 129828927 129829294 -10487471 - LTR7 LTR ERV1 0 450 1 510 279 70 0 chr10 129830442 129830614 -10486151 + MIR SINE MIR 9 192 -70 347 283 97 0 chr10 129831478 129831623 -10485142 - MER5B DNA MER1_type -9 169 11 267 324 21 56 chr10 129833273 129833415 -10483350 + MIR SINE MIR 126 262 0 268 76 111 10 chr10 129833617 129833818 -10482947 + (CTG)n Simple_repeat Simple_repeat 1 221 0 218 261 0 0 chr10 129834063 129834109 -10482656 - L2 LINE L2 -1 3271 3226 309 274 0 0 chr10 129834969 129835042 -10481723 + (GGGTG)n Simple_repeat Simple_repeat 2 74 0 2233 127 0 0 chr10 129835177 129835476 -10481289 - AluSx SINE Alu -13 299 1 462 79 0 0 chr10 129836738 129836801 -10479964 + (TTCA)n Simple_repeat Simple_repeat 4 66 0 401 253 136 37 chr10 129837440 129837602 -10479163 + MER5B DNA MER1_type 1 178 0 284 235 118 78 chr10 129837909 129838062 -10478703 - MIR SINE MIR -76 186 28 1372 216 54 14 chr10 129839110 129839480 -10477285 - MER63B DNA MER1_type -51 385 1 575 214 27 9 chr10 129841187 129841299 -10475466 - MER81 DNA DNA 0 114 1 2373 281 49 20 chr10 129841375 129842889 -10473876 - L1M2 LINE L1 -4171 3395 12 508 120 11 11 chr10 129843059 129843151 -10473614 + (TTTTC)n Simple_repeat Simple_repeat 2 93 0 1070 142 134 17 chr10 129844410 129844642 -10472123 - Tigger7 DNA MER2_type 0 2491 2233 * 1115 208 20 4 chr10 129844635 129844880 -10471885 - Tigger7 DNA MER2_type -264 469 221 315 369 30 15 chr10 129845985 129846183 -10470582 + L1MC/D LINE L1 5286 5486 -2322 1133 223 15 0 chr10 129846263 129846523 -10470242 - L1M4 LINE L1 -354 5824 5561 246 290 59 76 chr10 129846737 129846931 -10469834 + MIR SINE MIR 18 211 -51 197 409 32 0 chr10 129849289 129849382 -10467383 + MIR3 SINE MIR 67 162 -46 206 321 123 9 chr10 129850784 129850890 -10465875 - MIR SINE MIR -12 250 133 2130 144 0 3 chr10 129851254 129851567 -10465198 - AluSx SINE Alu 0 312 1 255 79 0 0 chr10 129852570 129852608 -10464157 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 1080 133 50 67 chr10 129856187 129856427 -10460338 - MER4C-int LTR ERV1 -5487 1271 1036 1860 156 58 99 chr10 129856434 129857056 -10459709 - MER4C-int LTR ERV1 -3525 1598 1190 351 176 0 15 chr10 129857122 129857190 -10459575 - MER34C LTR ERV1 -360 225 159 1190 86 0 0 chr10 129857225 129857400 -10459365 - AluY SINE Alu 0 306 132 354 231 0 26 chr10 129857422 129857500 -10459265 - MER4C-int LTR ERV1 -3369 2894 2819 1454 199 93 23 chr10 129857508 129857921 -10458844 - MER4C-int LTR ERV1 -4061 2270 1242 314 183 46 30 chr10 129857930 129858082 -10458683 - MER4C-int LTR ERV1 -5766 832 613 2233 146 53 32 chr10 129858268 129858752 -10458013 - MER4C-int LTR ERV1 -6043 555 12 925 91 176 11 chr10 129858767 129858854 -10457911 - MER4C LTR ERV1 0 465 394 258 81 0 0 chr10 129858854 129858891 -10457874 + (CA)n Simple_repeat Simple_repeat 2 38 0 925 91 176 11 chr10 129858891 129858990 -10457775 - MER4C LTR ERV1 -71 394 248 1626 91 8 16 chr10 129859223 129859466 -10457299 - MER4C LTR ERV1 -224 241 1 244 229 16 0 chr10 129860021 129860082 -10456683 - MLT1L LTR MaLR -8 607 546 225 315 65 25 chr10 129861393 129861672 -10455093 + L1MC/D LINE L1 5295 5584 -775 937 242 44 0 chr10 129861675 129861923 -10454842 - L1M4 LINE L1 -360 5824 5566 276 274 49 51 chr10 129862132 129862315 -10454450 + MIR SINE MIR 18 200 -62 227 313 15 37 chr10 129863432 129863566 -10453199 + CT-rich Low_complexity Low_complexity 2 132 0 267 238 183 63 chr10 129863965 129864091 -10452674 + MIR SINE MIR 80 220 -42 372 333 43 6 chr10 129864610 129864772 -10451993 - MIR SINE MIR -90 172 5 226 284 30 30 chr10 129865036 129865103 -10451662 + MER81 DNA DNA 48 114 0 233 200 63 0 chr10 129869243 129869338 -10447427 + (TA)n Simple_repeat Simple_repeat 2 102 0 184 294 0 0 chr10 129870703 129870754 -10446011 + MIR SINE MIR 104 154 -108 184 294 0 0 chr10 129870880 129870931 -10445834 + MIR SINE MIR 104 154 -108 180 308 0 0 chr10 129871709 129871761 -10445004 + MIR SINE MIR 104 155 -107 251 283 62 92 chr10 129871794 129871922 -10444843 - MIR SINE MIR -10 252 122 180 0 0 0 chr10 129871922 129871942 -10444823 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2188 124 0 0 chr10 129871949 129872248 -10444517 - AluSx SINE Alu -13 299 1 251 283 62 92 chr10 129872248 129872351 -10444414 - MIR SINE MIR -146 116 20 206 203 47 16 chr10 129873592 129873656 -10443109 - MIR SINE MIR -48 214 149 1333 241 79 55 chr10 129873658 129874236 -10442529 + MER92B LTR ERV1 1 596 -40 2481 106 16 25 chr10 129874236 129874603 -10442162 - THE1B LTR MaLR 0 364 1 1333 241 79 55 chr10 129874603 129874645 -10442120 + MER92B LTR ERV1 596 636 0 193 325 52 26 chr10 129874670 129874747 -10442018 + L3b LINE CR1 1412 1490 -93 2669 128 31 10 chr10 129875572 129875987 -10440778 - MSTA LTR MaLR -4 424 1 2306 128 0 0 chr10 129876034 129876339 -10440426 - AluSx SINE Alu -7 305 1 2446 132 5 15 chr10 129876809 129877202 -10439563 - MSTA LTR MaLR 0 428 40 243 83 0 62 chr10 129877193 129877241 -10439524 - MSTA LTR MaLR -333 95 51 * 278 88 35 53 chr10 129877241 129877298 -10439467 - MSTA LTR MaLR -333 95 40 278 88 35 53 chr10 129877289 129877346 -10439419 - MSTA LTR MaLR -333 95 40 255 123 35 53 chr10 129877337 129877394 -10439371 - MSTA LTR MaLR -333 95 40 * 422 149 0 112 chr10 129877385 129877492 -10439273 - MSTA LTR MaLR -333 95 1 484 267 153 16 chr10 129878079 129878344 -10438421 - L2 LINE L2 -271 3042 2740 1589 217 75 21 chr10 129878344 129878786 -10437979 - MLT1C LTR MaLR -1 449 1 348 291 182 14 chr10 129878786 129878934 -10437831 - L2 LINE L2 -574 2740 2568 442 303 33 51 chr10 129879047 129879297 -10437468 - MIR SINE MIR -16 246 6 241 266 0 0 chr10 129879462 129879526 -10437239 + (TA)n Simple_repeat Simple_repeat 1 64 0 289 344 55 12 chr10 129879619 129879657 -10437108 - MIR SINE MIR -16 246 211 1073 176 135 0 chr10 129879657 129879850 -10436915 - MER20 DNA MER1_type 0 219 1 289 344 55 12 chr10 129879850 129879974 -10436791 - MIR SINE MIR -51 211 77 210 71 0 0 chr10 129881498 129881526 -10435239 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 1892 146 0 14 chr10 129882510 129882832 -10433933 - AluSx SINE Alu 0 318 1 1959 147 7 0 chr10 129883128 129883420 -10433345 - AluSx SINE Alu -18 294 1 347 320 53 7 chr10 129884180 129884330 -10432435 - MIR3 SINE MIR -16 192 36 2793 164 82 6 chr10 129885016 129885516 -10431249 + MER41D LTR ERV1 20 557 0 1976 236 74 14 chr10 129886626 129887125 -10429640 + MLT1H LTR MaLR 21 549 0 195 212 61 61 chr10 129888235 129888301 -10428464 + MIR SINE MIR 12 77 -185 2896 6 0 25 chr10 129888476 129888801 -10427964 + AluYb8 SINE Alu 1 317 -1 205 313 130 9 chr10 129889825 129889940 -10426825 + L2 LINE L2 2924 3052 -220 442 227 11 0 chr10 129890203 129890291 -10426474 + L1MC4a LINE L1 5535 5623 -2185 468 279 71 45 chr10 129890296 129890633 -10426132 + L1MC4a LINE L1 5668 6013 -1795 225 227 0 0 chr10 129891068 129891112 -10425653 + L2 LINE L2 3261 3304 -9 306 262 203 20 chr10 129891141 129891343 -10425422 + L1ME4a LINE L1 5794 6032 -89 24 67 0 0 chr10 129891849 129891894 -10424871 + AT_rich Low_complexity Low_complexity 1 45 0 222 191 0 0 chr10 129891895 129891942 -10424823 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 1711 201 36 68 chr10 129891942 129892333 -10424432 - MLT2D LTR ERVL -40 480 1 861 247 98 24 chr10 129892414 129893111 -10423654 - L1ME3A LINE L1 -220 5950 5073 471 187 0 0 chr10 129893130 129893237 -10423528 + (CA)n Simple_repeat Simple_repeat 2 108 0 415 243 83 35 chr10 129893683 129893827 -10422938 + Charlie8 DNA MER1_type 104 254 -2163 202 254 70 14 chr10 129893853 129893892 -10422873 + L2 LINE L2 2281 2323 -991 343 257 293 7 chr10 129893892 129894032 -10422733 - MER5A DNA MER1_type -2 187 8 * 420 262 19 19 chr10 129894028 129894135 -10422630 - MIR SINE MIR -72 136 30 19892 29 0 0 chr10 129894979 129897974 -10418791 - L1PA3 LINE L1 -3 6152 3158 1866 176 9 19 chr10 129897974 129898395 -10418370 + L1P LINE L1 2110 2526 -3620 266 190 13 76 chr10 129898672 129898751 -10418014 - MIR SINE MIR -6 256 183 990 279 5 0 chr10 129898812 129899034 -10417731 - MER58A DNA MER1_type -1 223 1 469 252 43 0 chr10 129899052 129899167 -10417598 - MIR SINE MIR -46 216 97 1018 289 65 55 chr10 129899226 129899938 -10416827 + L2 LINE L2 2425 3143 -170 2188 115 3 7 chr10 129899938 129900242 -10416523 - AluSx SINE Alu -9 303 1 1018 289 65 55 chr10 129900242 129900415 -10416350 + L2 LINE L2 3143 3313 0 308 247 11 45 chr10 129900772 129900950 -10415815 + (TATAA)n Simple_repeat Simple_repeat 5 176 0 1857 191 65 51 chr10 129901825 129902317 -10414448 - MLT1D LTR MaLR 0 505 7 561 168 113 133 chr10 129903658 129903709 -10413056 + Charlie5 DNA MER1_type 2370 2420 -204 2023 153 18 3 chr10 129903709 129904042 -10412723 + L1MA10 LINE L1 5997 6334 0 561 168 113 133 chr10 129904042 129904065 -10412700 + Charlie5 DNA MER1_type 2420 2442 -182 1847 118 62 28 chr10 129904065 129904354 -10412411 + AluSg SINE Alu 1 299 -11 561 168 113 133 chr10 129904354 129904534 -10412231 + Charlie5 DNA MER1_type 2442 2620 -4 319 337 143 5 chr10 129904550 129904746 -10412019 - MIR SINE MIR -37 225 3 183 162 0 0 chr10 129905253 129905290 -10411475 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 489 312 40 15 chr10 129905463 129905662 -10411103 + MIR SINE MIR 48 251 -11 766 148 37 7 chr10 129905806 129905920 -10410845 - L1MB5 LINE L1 -182 5992 5872 2460 71 0 7 chr10 129905920 129906229 -10410536 - AluY SINE Alu -4 307 1 766 148 37 7 chr10 129906229 129906249 -10410516 - L1MB5 LINE L1 -302 5872 5854 2182 113 0 38 chr10 129906356 129906676 -10410089 - AluSx SINE Alu -4 308 1 494 266 9 9 chr10 129906915 129907028 -10409737 + L2 LINE L2 3200 3312 -1 256 292 10 10 chr10 129908674 129908770 -10407995 + MER103 DNA DNA 62 157 -9 1468 227 50 26 chr10 129909522 129909945 -10406820 - MER70B LTR ERVL -126 452 20 24 0 0 0 chr10 129910142 129910166 -10406599 + AT_rich Low_complexity Low_complexity 1 24 0 2216 124 0 0 chr10 129912936 129913242 -10403523 - AluSx SINE Alu -2 310 5 2322 82 0 41 chr10 129914307 129914625 -10402140 - AluY SINE Alu -6 305 1 242 360 73 7 chr10 129914909 129915045 -10401720 - MIR3 SINE MIR -54 154 10 571 263 102 31 chr10 129915601 129915856 -10400909 + ORSL DNA AcHobo 3 275 0 427 330 100 5 chr10 129917517 129917717 -10399048 + MIR SINE MIR 37 255 -7 739 159 81 143 chr10 129918507 129918535 -10398230 - L1MEc LINE L1 -4009 2387 2359 1925 154 7 3 chr10 129918535 129918834 -10397931 - AluSx SINE Alu -12 300 1 739 159 81 143 chr10 129918834 129918975 -10397790 - L1MEc LINE L1 -4037 2359 2211 1694 237 58 62 chr10 129918975 129919541 -10397224 - MLT1F1 LTR MaLR -2 565 2 739 159 81 143 chr10 129919541 129919742 -10397023 - L1MEc LINE L1 -4185 2211 2039 * 4502 266 62 15 chr10 129919740 129921359 -10395406 - L1MEc LINE L1 -4640 1756 62 2243 269 59 14 chr10 129921362 129921956 -10394809 - MLT1E2 LTR MaLR -5 621 1 36 23 0 0 chr10 129922078 129922121 -10394644 + AT_rich Low_complexity Low_complexity 1 43 0 290 334 67 41 chr10 129923038 129923284 -10393481 - MIR SINE MIR -3 259 10 1316 301 62 18 chr10 129923375 129924056 -10392709 - HAL1 LINE L1 -996 1511 801 3007 109 96 60 chr10 129924516 129925087 -10391678 - LTR14B LTR ERVK 0 608 17 465 320 27 18 chr10 129925152 129925371 -10391394 + MIR SINE MIR 42 262 0 268 278 37 37 chr10 129926559 129926667 -10390098 - MIR SINE MIR -58 204 97 524 375 8 4 chr10 129927236 129927471 -10389294 + MIR SINE MIR 15 250 -12 205 219 31 31 chr10 129927791 129927855 -10388910 + MIR SINE MIR 160 223 -39 186 43 0 0 chr10 129927884 129927907 -10388858 + (CA)n Simple_repeat Simple_repeat 1 23 0 190 97 0 32 chr10 129927969 129928000 -10388765 - MIR SINE MIR -12 250 221 406 277 155 7 chr10 129928050 129928198 -10388567 - MIR SINE MIR 0 262 93 752 263 49 45 chr10 129928831 129929055 -10387710 - MIR SINE MIR -10 252 28 447 280 50 67 chr10 129929831 129930070 -10386695 + MER102a DNA MER1_type 91 325 -5 334 239 0 65 chr10 129930642 129930734 -10386031 - L2 LINE L2 0 3313 3228 1981 147 6 19 chr10 129930751 129931065 -10385700 - AluSx SINE Alu -2 310 1 472 268 56 0 chr10 129931733 129931875 -10384890 - L1ME1 LINE L1 -2 6164 6015 304 273 0 13 chr10 129932357 129932434 -10384331 + (CAGA)n Simple_repeat Simple_repeat 3 78 0 2017 118 42 0 chr10 129932722 129933009 -10383756 + AluSc SINE Alu 1 299 -10 5736 149 15 15 chr10 129933483 129934472 -10382293 - L1MA7 LINE L1 0 6291 5303 180 0 0 0 chr10 129934474 129934494 -10382271 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1695 213 38 14 chr10 129934505 129934871 -10381894 - L1MD2 LINE L1 -522 5837 5463 382 211 19 62 chr10 129934869 129935030 -10381735 - L1MD2 LINE L1 -1679 4467 4314 * 266 104 0 21 chr10 129935096 129935144 -10381621 + (GA)n Simple_repeat Simple_repeat 1 47 0 190 246 53 18 chr10 129935170 129935227 -10381538 + MER5A DNA MER1_type 55 113 -76 668 280 29 25 chr10 129936129 129936368 -10380397 + MIR SINE MIR 8 247 -15 488 221 175 0 chr10 129936920 129937074 -10379691 - MIR SINE MIR 0 262 82 322 323 58 28 chr10 129938434 129938578 -10378187 + MIR SINE MIR 1 142 -66 203 0 37 0 chr10 129938621 129938648 -10378117 + (CA)n Simple_repeat Simple_repeat 2 29 0 270 0 0 0 chr10 129940689 129940719 -10376046 + (TG)n Simple_repeat Simple_repeat 1 30 0 196 371 29 0 chr10 129940971 129941041 -10375724 + L2 LINE L2 3151 3222 -50 290 282 103 8 chr10 129941733 129941850 -10374915 + MER5A DNA MER1_type 35 162 -27 449 244 53 0 chr10 129942181 129942312 -10374453 - MIR SINE MIR -36 226 89 564 241 60 18 chr10 129942439 129942605 -10374160 - MIR SINE MIR -71 191 19 194 329 0 25 chr10 129942761 129942840 -10373925 - MIR SINE MIR -137 125 49 1476 243 69 65 chr10 129943149 129943473 -10373292 - MLT1H1 LTR MaLR -2 553 224 1856 110 80 0 chr10 129943473 129943759 -10373006 - AluSx SINE Alu 0 307 1 1476 243 69 65 chr10 129943759 129943984 -10372781 - MLT1H1 LTR MaLR -331 224 1 332 230 23 11 chr10 129946236 129946323 -10370442 - MIR SINE MIR -98 164 77 238 288 162 9 chr10 129948110 129948221 -10368544 - L2 LINE L2 0 3272 3145 2760 23 3 0 chr10 129948556 129948863 -10367902 - AluY SINE Alu -3 308 1 366 312 18 3 chr10 129949127 129949259 -10367506 - MIR SINE MIR -62 146 30 791 246 6 0 chr10 129950232 129950407 -10366358 + MER5B DNA MER1_type 3 178 0 1447 246 69 19 chr10 129950789 129951207 -10365558 + MER45C DNA AcHobo 195 633 -320 376 113 19 0 chr10 129951203 129951256 -10365509 + MER45C DNA AcHobo 900 953 0 * 2000 165 9 14 chr10 129952075 129952421 -10364344 - MER2 DNA MER2_type 0 344 1 185 321 147 16 chr10 129953874 129954064 -10362701 - L3 LINE CR1 -159 1418 1204 250 309 0 0 chr10 129954150 129954218 -10362547 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 937 214 32 59 chr10 129954939 129955159 -10361606 + MER20 DNA MER1_type 6 219 0 257 170 0 0 chr10 129955258 129955305 -10361460 + MADE1 DNA Mariner 1 47 -33 441 294 20 86 chr10 129955670 129955962 -10360803 - L2 LINE L2 -5 3308 3036 391 138 28 66 chr10 129957451 129957632 -10359133 + GA-rich Low_complexity Low_complexity 4 177 0 2351 110 0 0 chr10 129958550 129958851 -10357914 + AluSx SINE Alu 1 301 -11 282 95 0 0 chr10 129959633 129959675 -10357090 + (CA)n Simple_repeat Simple_repeat 1 42 0 254 373 8 0 chr10 129960514 129960632 -10356133 + MIR SINE MIR 134 252 -10 733 180 23 0 chr10 129964547 129964675 -10352090 - L2 LINE L2 0 3313 3183 21 0 0 0 chr10 129965084 129965105 -10351660 + AT_rich Low_complexity Low_complexity 1 21 0 472 198 80 99 chr10 129965635 129965797 -10350968 - MER103 DNA DNA -5 161 3 378 348 19 12 chr10 129965828 129965989 -10350776 + MIR SINE MIR 30 190 -58 858 19 0 0 chr10 129966588 129966693 -10350072 - L1P LINE L1 -2884 3262 3158 * 8749 29 1 0 chr10 129966691 129967736 -10349029 + L1P LINE L1 2108 3153 -2993 304 226 38 38 chr10 129968381 129968487 -10348278 + L2 LINE L2 3208 3313 0 2111 151 6 26 chr10 129968931 129969275 -10347490 + MER1B DNA MER1_type 1 337 0 226 174 203 0 chr10 129971933 129972002 -10344763 - MER5A DNA MER1_type -88 101 19 411 231 154 0 chr10 129972026 129972156 -10344609 - MIR3 SINE MIR -55 153 4 329 150 0 67 chr10 129972616 129972676 -10344089 - MLT1J2 LTR MaLR -6 444 389 21 0 0 0 chr10 129976095 129976116 -10340649 + AT_rich Low_complexity Low_complexity 1 21 0 1934 155 14 0 chr10 129976676 129976972 -10339793 + AluSp SINE Alu 1 300 -13 370 100 50 0 chr10 129977131 129977191 -10339574 + AluSp/q SINE Alu 241 303 0 3405 16 0 0 chr10 129978549 129978932 -10337833 + L1PA2 LINE L1 5773 6155 0 182 62 31 0 chr10 129978938 129978970 -10337795 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 630 292 57 45 chr10 129979145 129979570 -10337195 - LTR16A LTR ERVL -6 444 15 563 265 67 48 chr10 129979727 129980022 -10336743 - L1MDa LINE L1 -5804 736 404 810 255 65 25 chr10 129980254 129980576 -10336189 - L1MDa LINE L1 -5968 572 238 223 243 40 54 chr10 129980626 129980700 -10336065 - MER5A DNA MER1_type -3 186 114 2425 178 22 40 chr10 129981679 129982174 -10334591 + MER66B LTR ERV1 1 486 0 509 211 14 14 chr10 129983234 129983381 -10333384 + MER113 DNA MER1_type? 127 273 -248 3313 255 50 6 chr10 129983424 129984599 -10332166 + L1MEc LINE L1 2012 3195 -3020 363 241 117 14 chr10 129984606 129984751 -10332014 + MER113 DNA MER1_type? 334 493 -28 373 239 81 94 chr10 129986486 129986720 -10330045 - MER106A DNA MER1_type 0 236 6 196 311 38 55 chr10 129986960 129987195 -10329570 + L2 LINE L2 3031 3261 -52 279 54 0 0 chr10 129987978 129988015 -10328750 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 22 0 0 0 chr10 129990557 129990579 -10326186 + GC_rich Low_complexity Low_complexity 1 22 0 468 0 0 0 chr10 129990853 129990905 -10325860 + (CA)n Simple_repeat Simple_repeat 2 53 0 1165 253 67 26 chr10 129991192 129991580 -10325185 + L1ME2 LINE L1 5617 6020 -144 225 121 0 0 chr10 129991580 129991613 -10325152 + MER3 DNA MER1_type 16 48 -161 286 227 171 0 chr10 129991614 129991702 -10325063 + L1ME1 LINE L1 6058 6160 -6 1460 179 34 11 chr10 129992447 129992758 -10324007 + AluJb SINE Alu 15 331 0 610 263 16 21 chr10 129996184 129996374 -10320391 + MER5A DNA MER1_type 1 189 0 619 271 54 5 chr10 129997336 129997539 -10319226 + MIR SINE MIR 48 260 -2 867 172 21 52 chr10 129997699 129997891 -10318874 + MER5A DNA MER1_type 4 189 0 375 242 137 33 chr10 129997900 129998053 -10318712 + MIR SINE MIR 19 187 -75 212 236 18 0 chr10 129998100 129998155 -10318610 - MER5B DNA MER1_type -5 173 118 483 262 16 0 chr10 129998190 129998316 -10318449 - MER5B DNA MER1_type -47 131 4 352 333 9 0 chr10 129998321 129998429 -10318336 + MIR SINE MIR 12 120 -142 180 77 0 0 chr10 129998509 129998535 -10318230 + (CAT)n Simple_repeat Simple_repeat 1 26 0 3361 211 21 15 chr10 129999063 130000184 -10316581 - L1ME LINE L1 -481 5685 4562 3873 176 58 7 chr10 130000215 130000758 -10316007 + L1MB8 LINE L1 5260 5852 -326 1769 174 68 0 chr10 130000758 130001080 -10315685 + MER2 DNA MER2_type 1 344 0 3873 176 58 7 chr10 130001080 130001275 -10315490 + L1MB8 LINE L1 5852 6036 -142 297 75 0 0 chr10 130001276 130001316 -10315449 + (TA)n Simple_repeat Simple_repeat 2 41 0 229 167 12 37 chr10 130001358 130001520 -10315245 + (TA)n Simple_repeat Simple_repeat 1 158 0 1498 205 0 24 chr10 130001531 130001819 -10314946 - AluJo SINE Alu -31 281 1 970 98 13 0 chr10 130001826 130001979 -10314786 + L1MB7 LINE L1 6030 6184 0 945 147 0 0 chr10 130002069 130002205 -10314560 + AluJb SINE Alu 1 136 -176 2507 74 0 0 chr10 130002560 130002858 -10313907 - AluSg SINE Alu -12 298 1 319 289 48 16 chr10 130002953 130003140 -10313625 - L1ME LINE L1 -419 5702 5510 317 291 90 49 chr10 130004046 130004542 -10312223 - L2 LINE L2 -48 3265 2753 1608 190 108 9 chr10 130009131 130009567 -10307198 + L1M4 LINE L1 1003 1481 -5061 1204 244 84 41 chr10 130009553 130009880 -10306885 + L1MCa LINE L1 6 356 -6070 * 198 0 0 0 chr10 130009880 130009902 -10306863 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1204 244 84 41 chr10 130009902 130009988 -10306777 + L1MCa LINE L1 356 437 -5989 3327 208 87 10 chr10 130009988 130010686 -10306079 - L1MDa LINE L1 -5774 766 15 363 265 12 0 chr10 130010738 130010821 -10305944 - MER96 DNA MER1_type? -83 92 9 845 181 16 93 chr10 130011088 130011281 -10305484 + AluJo SINE Alu 1 178 -134 396 248 19 0 chr10 130011778 130011883 -10304882 - MIR SINE MIR -57 151 45 671 276 116 55 chr10 130014464 130014845 -10301920 - MLT1E3 LTR MaLR -218 406 3 2855 49 3 0 chr10 130015470 130015818 -10300947 + L1PA4 LINE L1 5577 5925 -230 25140 30 7 1 chr10 130015935 130019697 -10297068 + L1PA4 LINE L1 2390 6155 0 2585 209 50 9 chr10 130020206 130020741 -10296024 - REP3 LTR ERV -5 557 1 850 309 71 11 chr10 130020772 130021122 -10295643 - LTR16A LTR ERVL -17 433 63 3062 225 87 31 chr10 130021169 130022912 -10293853 - L1ME1 LINE L1 -1 6165 4306 432 263 71 86 chr10 130022947 130023515 -10293250 + L2 LINE L2 2694 3263 -50 368 202 124 23 chr10 130023561 130023690 -10293075 + L1ME4a LINE L1 5964 6105 -16 593 229 76 84 chr10 130024341 130024590 -10292175 - MIR SINE MIR 0 262 16 288 241 36 12 chr10 130024652 130024735 -10292030 - L1MC2 LINE L1 -25 6599 6515 274 303 104 54 chr10 130024891 130025132 -10291633 - MLT1K LTR MaLR -186 402 150 2849 183 122 29 chr10 130025647 130026345 -10290420 - L1MC2 LINE L1 -125 6499 5737 2795 233 64 23 chr10 130026353 130027037 -10289728 - L1MC2 LINE L1 -2106 4320 3589 2123 113 20 0 chr10 130027037 130027330 -10289435 - AluSx SINE Alu -13 299 1 2795 233 64 23 chr10 130027330 130027550 -10289215 - L1MC2 LINE L1 -2837 3589 3379 5275 143 16 4 chr10 130027550 130028369 -10288396 + Tigger1 DNA MER2_type 1 829 -1589 28838 34 3 2 chr10 130028369 130033651 -10283114 + L1PA4 LINE L1 436 5726 -429 931 43 0 0 chr10 130033753 130033870 -10282895 + L1PA4 LINE L1 6036 6152 -3 3610 138 58 20 chr10 130033884 130034572 -10282193 + Tigger1 DNA MER2_type 799 1512 -906 2136 253 25 2 chr10 130034599 130035235 -10281530 - L1MC2 LINE L1 -3050 3376 2726 1197 170 291 5 chr10 130035235 130035634 -10281131 - L1MC2 LINE L1 -4494 1932 1420 1208 133 51 5 chr10 130035637 130035833 -10280932 - MER30 DNA MER1_type -1 229 25 2073 200 68 24 chr10 130035851 130036615 -10280150 - L1MC2 LINE L1 -4851 1056 597 3243 168 17 5 chr10 130036623 130037207 -10279558 + MER50 LTR ERV1 121 711 -23 1341 268 97 16 chr10 130037208 130037764 -10279001 - L1MC2 LINE L1 -5808 618 18 261 229 71 0 chr10 130037783 130037853 -10278912 + Charlie1 DNA MER1_type 2678 2752 -9 2096 138 181 14 chr10 130038126 130038716 -10278049 - LTR8A LTR ERV1 0 727 10 260 333 65 0 chr10 130039017 130039110 -10277655 - L2 LINE L2 -249 3023 2925 2232 112 3 0 chr10 130039171 130039467 -10277298 + AluSx SINE Alu 1 297 -15 314 333 58 23 chr10 130041925 130042096 -10274669 - MIR3 SINE MIR -12 196 20 292 274 86 34 chr10 130042856 130042973 -10273792 + MIR SINE MIR 18 140 -68 874 144 0 0 chr10 130043058 130043190 -10273575 + FLAM_C SINE Alu 1 132 -1 467 241 70 70 chr10 130043318 130043546 -10273219 - L2 LINE L2 -4 3309 3082 262 341 61 37 chr10 130044070 130044234 -10272531 + MIR3 SINE MIR 20 187 -21 21 0 0 0 chr10 130044602 130044623 -10272142 + AT_rich Low_complexity Low_complexity 1 21 0 254 246 0 33 chr10 130045069 130045130 -10271635 - L2 LINE L2 -3 3310 3252 225 380 55 15 chr10 130045210 130045410 -10271355 - L2 LINE L2 -215 3057 2850 2080 115 3 11 chr10 130045464 130045750 -10271015 - AluSx SINE Alu -24 288 5 256 327 39 82 chr10 130046345 130046553 -10270212 + MIR SINE MIR 13 211 -51 594 332 157 6 chr10 130046696 130047241 -10269524 + L2 LINE L2 2591 3237 -76 405 209 97 45 chr10 130047424 130047558 -10269207 + MER5A DNA MER1_type 27 167 -22 270 308 17 0 chr10 130048616 130048733 -10268032 - L1ME LINE L1 -299 5822 5704 24 0 0 0 chr10 130048865 130048889 -10267876 + AT_rich Low_complexity Low_complexity 1 24 0 609 256 108 25 chr10 130048905 130049108 -10267657 + MIR SINE MIR 13 232 -30 21 0 0 0 chr10 130050378 130050399 -10266366 + AT_rich Low_complexity Low_complexity 1 21 0 883 274 61 10 chr10 130050652 130050962 -10265803 + L1MDa LINE L1 75 400 -6140 3576 218 6 5 chr10 130051188 130052188 -10264577 + L1 LINE L1 1840 2836 -3310 977 176 176 4 chr10 130052313 130052569 -10264196 + Tigger3(Golem) DNA MER2_type 2730 3029 0 573 338 107 19 chr10 130052583 130053171 -10263594 - L2 LINE L2 -71 3242 2590 371 329 43 43 chr10 130053319 130053529 -10263236 - MIR SINE MIR -51 211 2 200 293 71 20 chr10 130053655 130053754 -10263011 + L2 LINE L2 2286 2389 -925 1443 172 81 14 chr10 130053900 130054197 -10262568 - MLT1E3 LTR MaLR -300 324 8 2272 115 3 0 chr10 130054209 130054514 -10262251 - AluSq SINE Alu -7 306 1 418 329 13 104 chr10 130054690 130055006 -10261759 - L2 LINE L2 -54 3218 2932 1090 167 23 9 chr10 130055152 130055368 -10261397 + MER20 DNA MER1_type 1 219 0 980 160 39 6 chr10 130056219 130056400 -10260365 + MER20 DNA MER1_type 1 187 -32 577 220 112 82 chr10 130057000 130057232 -10259533 + MIR SINE MIR 8 246 -16 2228 85 3 0 chr10 130057943 130058226 -10258539 + AluSp SINE Alu 1 284 -29 848 182 16 59 chr10 130058364 130058551 -10258214 - AluJo SINE Alu -133 179 1 707 196 14 0 chr10 130058606 130058749 -10258016 - AluJb SINE Alu -5 307 163 1623 134 57 85 chr10 130058749 130059137 -10257628 + MER51B LTR ERV1 1 377 0 1067 95 48 0 chr10 130059137 130059305 -10257460 + MER51B-int LTR ERV1 1 176 -7640 * 9931 132 27 41 chr10 130059293 130061167 -10255598 + MER51B-int LTR ERV1 329 2176 -5640 1935 136 54 3 chr10 130061168 130061499 -10255266 + HUERS-P1 LTR ERV1 2023 2370 -5167 * 2509 99 37 41 chr10 130061491 130061938 -10254827 + HUERS-P1 LTR ERV1 1212 2381 -3882 2195 122 0 3 chr10 130062365 130062676 -10254089 + AluSg SINE Alu 1 310 0 1500 168 76 80 chr10 130063339 130063838 -10252927 + Charlie4a DNA MER1_type 12 508 0 2302 118 0 3 chr10 130064089 130064402 -10252363 - AluSx SINE Alu 0 312 1 1117 188 125 27 chr10 130064500 130064829 -10251936 + MLT1A1 LTR MaLR 5 365 0 293 320 87 0 chr10 130064864 130065070 -10251695 + L1ME3A LINE L1 5663 5886 -284 2061 165 3 0 chr10 130065273 130065582 -10251183 - AluSx SINE Alu -2 310 1 792 168 0 36 chr10 130065760 130065897 -10250868 - FLAM_C SINE Alu 0 133 2 1729 199 7 0 chr10 130065958 130066264 -10250501 - AluJo SINE Alu -4 308 1 1841 141 31 20 chr10 130066469 130066823 -10249942 + LTR45B LTR ERV1 1 358 -131 2444 109 20 0 chr10 130066977 130067325 -10249440 - THE1A LTR MaLR 0 355 1 338 307 44 7 chr10 130067325 130067462 -10249303 - MER5B DNA MER1_type -18 160 19 579 238 10 99 chr10 130067732 130068034 -10248731 - L1MC4a LINE L1 -1763 6045 5771 241 250 56 0 chr10 130068174 130068246 -10248519 + L1MD2 LINE L1 6073 6148 -211 508 241 18 92 chr10 130068460 130068549 -10248216 - L1MC4a LINE L1 -2294 5514 5420 2171 100 0 26 chr10 130068549 130068859 -10247906 - AluSx SINE Alu -2 310 9 508 241 18 92 chr10 130068859 130069051 -10247714 - L1MC4a LINE L1 -2388 5420 5254 344 151 0 0 chr10 130069152 130069232 -10247533 - AluJ/FRAM SINE Alu 0 312 233 2025 236 60 11 chr10 130069514 130070179 -10246586 + L1MD2 LINE L1 1539 2333 -4311 1219 233 78 18 chr10 130070175 130070673 -10246092 + L1MD2 LINE L1 2632 3159 -3485 * 1349 213 51 57 chr10 130070695 130070961 -10245804 + L1MD2 LINE L1 4348 4611 -2033 2359 103 0 3 chr10 130070961 130071271 -10245494 - AluY SINE Alu -2 309 1 1349 213 51 57 chr10 130071271 130071496 -10245269 + L1MD2 LINE L1 4611 4836 -1808 839 149 51 64 chr10 130071497 130071772 -10244993 - MER2 DNA MER2_type 0 345 9 2113 221 76 32 chr10 130071929 130072242 -10244523 + L1MD2 LINE L1 4873 5171 -1548 2116 119 0 0 chr10 130072242 130072528 -10244237 - AluSx SINE Alu -1 311 26 2113 221 76 32 chr10 130072528 130072716 -10244049 + L1MD2 LINE L1 5171 5349 -1370 1840 175 0 3 chr10 130072716 130073007 -10243758 + AluJb SINE Alu 1 290 -22 2113 221 76 32 chr10 130073007 130073567 -10243198 + L1MD2 LINE L1 5349 5976 -743 2003 124 58 3 chr10 130074135 130074426 -10242339 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 130074801 130074822 -10241943 + AT_rich Low_complexity Low_complexity 1 21 0 1874 211 153 42 chr10 130075025 130075821 -10240944 + L1MD2 LINE L1 5949 6826 -31 26 0 0 0 chr10 130075830 130075856 -10240909 + AT_rich Low_complexity Low_complexity 1 26 0 267 256 98 0 chr10 130075879 130075961 -10240804 - Charlie1 DNA MER1_type -2 2759 2670 21 57 0 0 chr10 130075961 130075996 -10240769 + AT_rich Low_complexity Low_complexity 1 35 0 1115 246 67 6 chr10 130076118 130076448 -10240317 - Charlie1 DNA MER1_type -2411 350 1 22 56 0 0 chr10 130076944 130076980 -10239785 + AT_rich Low_complexity Low_complexity 1 36 0 3873 221 8 20 chr10 130077137 130078371 -10238394 + L1 LINE L1 2890 4037 -2109 23 0 0 0 chr10 130078616 130078639 -10238126 + AT_rich Low_complexity Low_complexity 1 23 0 6303 92 41 13 chr10 130079652 130080668 -10236097 + L1PBa LINE L1 1451 2495 -4368 477 104 0 26 chr10 130080792 130080869 -10235896 - AluSc SINE Alu -155 154 80 286 138 46 15 chr10 130080869 130080934 -10235831 - LTR49 LTR ERV1 -520 75 9 1100 163 61 44 chr10 130080944 130081239 -10235526 + L1MD2 LINE L1 5498 5797 -562 300 130 54 65 chr10 130081604 130081696 -10235069 + MER34 LTR ERV1 449 539 -3 1053 220 131 24 chr10 130081716 130082007 -10234758 + L1MD2 LINE L1 5879 6200 -159 1709 125 18 33 chr10 130082007 130082388 -10234377 + MER65A LTR ERV1 1 439 -6 757 170 42 12 chr10 130082377 130082542 -10234223 + L1MD1 LINE L1 6065 6234 -8 2607 108 3 8 chr10 130082720 130083081 -10233684 + THE1B LTR MaLR 1 359 -5 1891 142 87 35 chr10 130083515 130083882 -10232883 + MER4B LTR ERV1 1 386 -224 1225 117 11 0 chr10 130083893 130084072 -10232693 + LTR9B LTR ERV1 3 183 -461 2162 120 3 0 chr10 130084072 130084371 -10232394 + AluSq SINE Alu 3 302 -11 2964 107 48 0 chr10 130085085 130085497 -10231268 + MER57B LTR ERV1 3 434 0 688 203 63 0 chr10 130086107 130086250 -10230515 + MER20 DNA MER1_type 3 154 -65 194 358 28 56 chr10 130086757 130086936 -10229829 + L2 LINE L2 2848 3021 -251 953 196 0 7 chr10 130087191 130087344 -10229421 + FRAM SINE Alu 2 153 -13 23 0 0 0 chr10 130087349 130087372 -10229393 + AT_rich Low_complexity Low_complexity 1 23 0 253 271 0 14 chr10 130087479 130087549 -10229216 + GA-rich Low_complexity Low_complexity 2 70 0 8200 102 117 75 chr10 130087624 130089255 -10227510 + pTR5 LTR ERV1 741 2438 0 579 163 0 0 chr10 130089260 130089358 -10227407 - MSTD LTR MaLR -294 102 5 1758 171 10 3 chr10 130089539 130089832 -10226933 + AluJo SINE Alu 1 295 -17 2076 121 0 29 chr10 130089855 130090161 -10226604 + AluSg SINE Alu 1 297 -13 1873 126 18 3 chr10 130090390 130090675 -10226090 + AluSx SINE Alu 7 295 -17 2210 69 26 30 chr10 130090727 130091031 -10225734 + AluY SINE Alu 1 303 -8 324 0 0 0 chr10 130091924 130091960 -10224805 + (CGGGG)n Simple_repeat Simple_repeat 1 36 0 441 237 112 83 chr10 130092319 130092488 -10224277 - MER69A DNA AcHobo -3 174 1 181 290 194 0 chr10 130093525 130093587 -10223178 - L2 LINE L2 -2 3270 3197 219 318 228 11 chr10 130094707 130094896 -10221869 - MIR SINE MIR -32 230 1 996 175 63 0 chr10 130095148 130095337 -10221428 + MER3 DNA MER1_type 9 209 0 1338 195 0 0 chr10 130095400 130095631 -10221134 - AluJo SINE Alu -81 231 1 927 179 20 7 chr10 130095773 130095924 -10220841 + FRAM SINE Alu 2 154 -12 757 209 78 42 chr10 130096011 130096202 -10220563 - MIR SINE MIR -45 217 20 535 267 217 31 chr10 130096250 130096743 -10220022 + L2 LINE L2 2722 3313 0 2411 68 0 29 chr10 130097139 130097448 -10219317 + AluY SINE Alu 1 300 -11 537 249 141 0 chr10 130097709 130097886 -10218879 - MER63A DNA MER1_type -8 202 1 756 271 201 12 chr10 130098337 130098739 -10218026 - L2 LINE L2 -1 3312 2835 510 254 180 32 chr10 130098894 130099111 -10217654 - MIR SINE MIR -6 256 8 278 220 177 71 chr10 130099224 130099365 -10217400 + MER112 DNA MER1_type 47 202 -58 182 37 37 0 chr10 130099589 130099616 -10217149 + (TA)n Simple_repeat Simple_repeat 2 29 0 3190 165 90 35 chr10 130099660 130100449 -10216316 + L1MB8 LINE L1 5154 6038 -140 2233 96 0 0 chr10 130100449 130100742 -10216023 - AluSx SINE Alu -9 303 11 3190 165 90 35 chr10 130100742 130100883 -10215882 + L1MB8 LINE L1 6038 6170 -8 393 201 212 5 chr10 130100888 130101001 -10215764 - MER3 DNA MER1_type -124 85 5 198 281 130 41 chr10 130102845 130102991 -10213774 + L3 LINE CR1 231 389 -1188 207 321 48 24 chr10 130106049 130106133 -10210632 - L2 LINE L2 -36 3236 3151 1943 127 3 45 chr10 130107071 130107385 -10209380 + AluSx SINE Alu 1 301 -11 251 238 209 19 chr10 130107756 130107861 -10208904 - MIR3 SINE MIR -48 160 36 500 231 157 41 chr10 130108106 130108253 -10208512 - MER5A DNA MER1_type 0 189 26 1764 188 29 26 chr10 130108287 130108627 -10208138 - MER58B DNA MER1_type 0 341 1 29 28 0 0 chr10 130109492 130109528 -10207237 + AT_rich Low_complexity Low_complexity 1 36 0 871 192 28 39 chr10 130109666 130109848 -10206917 + AluJb SINE Alu 95 274 -38 674 203 92 12 chr10 130109849 130110012 -10206753 + MER3 DNA MER1_type 18 193 -16 1082 185 31 48 chr10 130110077 130110304 -10206461 - MER58A DNA MER1_type -1 223 1 241 347 13 0 chr10 130110403 130110478 -10206287 + L1MEd LINE L1 443 518 -5601 3261 247 66 25 chr10 130110723 130111664 -10205101 - L1ME3A LINE L1 -3 6167 5138 2363 82 13 3 chr10 130111664 130111968 -10204797 - AluY SINE Alu -4 307 1 3261 247 66 25 chr10 130111968 130112468 -10204297 - L1ME3A LINE L1 -1032 5138 4660 2313 84 0 10 chr10 130112899 130113198 -10203567 + AluSc SINE Alu 1 296 -13 1457 108 169 36 chr10 130113206 130113455 -10203310 + AluSg SINE Alu 2 283 -17 256 91 0 0 chr10 130113899 130113943 -10202822 + AluSg SINE Alu 262 305 -3 1622 178 32 41 chr10 130114060 130114162 -10202603 - MER2 DNA MER2_type -9 336 235 1669 71 0 14 chr10 130114162 130114373 -10202392 - AluSq SINE Alu -6 307 100 1622 178 32 41 chr10 130114373 130114608 -10202157 - MER2 DNA MER2_type -110 235 2 302 324 61 7 chr10 130114626 130114774 -10201991 + MIR SINE MIR 107 262 0 798 188 0 36 chr10 130116145 130116283 -10200482 + AluJ SINE Alu 1 133 -169 1515 175 114 27 chr10 130116712 130117044 -10199721 + MLT1A1 LTR MaLR 5 365 0 198 208 0 0 chr10 130120151 130120199 -10196566 + (CCG)n Simple_repeat Simple_repeat 2 49 0 419 229 263 15 chr10 130121576 130121781 -10194984 - MIR SINE MIR -6 256 1 1052 261 36 16 chr10 130121904 130122157 -10194608 + MIR SINE MIR 5 262 0 191 301 140 65 chr10 130122147 130122240 -10194525 - L2 LINE L2 -27 3286 3187 * 309 313 92 15 chr10 130122611 130122742 -10194023 - MIR SINE MIR -6 256 116 2152 200 20 92 chr10 130124103 130124693 -10192072 - MER44D DNA MER2_type -1 604 2 421 273 97 17 chr10 130125028 130125204 -10191561 + MIR SINE MIR 1 190 -72 512 276 38 42 chr10 130125516 130125755 -10191010 + L2 LINE L2 3076 3313 0 287 340 138 6 chr10 130125902 130126061 -10190704 - MIR3 SINE MIR -1 207 28 825 194 0 15 chr10 130126325 130126459 -10190306 - FLAM_A SINE Alu -1 132 1 24 0 0 0 chr10 130126507 130126531 -10190234 + AT_rich Low_complexity Low_complexity 1 24 0 1125 168 11 5 chr10 130126609 130126799 -10189966 + AluJ SINE Alu 108 298 -14 22 35 0 0 chr10 130126981 130127010 -10189755 + AT_rich Low_complexity Low_complexity 1 29 0 183 341 30 23 chr10 130127517 130127649 -10189116 + MIR3 SINE MIR 64 196 -12 2368 59 0 0 chr10 130128040 130128330 -10188435 - AluY SINE Alu -21 290 1 2003 130 81 26 chr10 130131558 130131903 -10184862 + THE1B LTR MaLR 1 364 0 281 167 0 0 chr10 130132544 130132586 -10184179 + 5S rRNA rRNA 1 42 -79 1077 184 96 23 chr10 130132592 130132810 -10183955 + MER77 LTR ERV1 1 234 -371 36 0 0 0 chr10 130132813 130132849 -10183916 + AT_rich Low_complexity Low_complexity 1 36 0 723 58 0 0 chr10 130133084 130133171 -10183594 - THE1B LTR MaLR -277 87 1 2412 170 17 68 chr10 130133691 130134173 -10182592 + LTR32 LTR ERVL 15 471 0 26 0 0 0 chr10 130134193 130134219 -10182546 + AT_rich Low_complexity Low_complexity 1 26 0 187 337 63 21 chr10 130134253 130134348 -10182417 + L2 LINE L2 3179 3277 -36 38 61 0 0 chr10 130134409 130134475 -10182290 + AT_rich Low_complexity Low_complexity 1 66 0 2071 135 0 0 chr10 130135235 130135531 -10181234 - AluSx SINE Alu -16 296 1 1050 179 49 69 chr10 130136273 130136519 -10180246 + HERVL40 LTR ERVL 4957 5197 -333 390 269 46 21 chr10 130136517 130136697 -10180068 - HERVL40 LTR ERVL -4178 1352 1102 * 1648 160 77 0 chr10 130136697 130136984 -10179781 + AluJb SINE Alu 1 309 -3 390 269 46 21 chr10 130136984 130137023 -10179742 - HERVL40 LTR ERVL -4428 1102 1065 1159 228 25 104 chr10 130137449 130137893 -10178872 - LTR40c LTR ERVL -4 461 53 1666 216 55 30 chr10 130137959 130138352 -10178413 + L1MC4a LINE L1 5553 6039 -1769 1440 195 34 34 chr10 130138352 130138649 -10178116 - AluJo SINE Alu -15 297 1 1666 216 55 30 chr10 130138649 130138820 -10177945 + L1MC4a LINE L1 6039 6204 -1604 412 263 127 50 chr10 130138856 130139115 -10177650 + L1ME LINE L1 417 695 -5375 1361 189 110 10 chr10 130139138 130139439 -10177326 + MSTD LTR MaLR 2 332 -64 6623 152 47 25 chr10 130139451 130140620 -10176145 + L1PA13 LINE L1 1 2045 -5529 7041 200 32 43 chr10 130140629 130142839 -10173926 + L1PA13 LINE L1 2181 4344 -3240 5753 174 27 2 chr10 130142837 130143904 -10172861 + L1PA13 LINE L1 5555 6648 -936 * 941 160 166 0 chr10 130143904 130144091 -10172674 - MSTA LTR MaLR -210 218 1 5384 98 34 14 chr10 130144091 130144888 -10171877 + L1PA13 LINE L1 6770 7582 -19 21 0 0 0 chr10 130144889 130144910 -10171855 + AT_rich Low_complexity Low_complexity 1 21 0 2085 94 33 39 chr10 130144914 130145221 -10171544 + AluSg SINE Alu 1 305 -5 365 100 0 0 chr10 130145222 130145272 -10171493 + MSTD LTR MaLR 347 396 0 744 176 61 8 chr10 130145308 130145439 -10171326 + FAM SINE Alu 20 157 -28 6122 231 85 43 chr10 130145469 130147121 -10169644 + MSTD-int LTR MaLR 2 1722 -13 884 182 12 18 chr10 130147132 130147302 -10169463 + MSTD LTR MaLR 1 169 -227 1243 270 107 35 chr10 130147303 130147866 -10168899 + L1ME3A LINE L1 5326 5928 -242 346 241 67 113 chr10 130147952 130148147 -10168618 + MER46C DNA MER2_type 153 338 0 322 292 81 19 chr10 130148177 130148338 -10168427 - L2 LINE L2 -775 2539 2369 2204 184 53 14 chr10 130148765 130149080 -10167685 - MSTB1 LTR MaLR 0 432 96 2340 150 96 0 chr10 130149080 130149467 -10167298 + MSTA LTR MaLR 1 424 -4 2204 184 53 14 chr10 130149467 130149564 -10167201 - MSTB1 LTR MaLR -336 96 4 843 137 0 0 chr10 130149953 130150077 -10166688 - FLAM_C SINE Alu -19 124 1 6451 210 65 43 chr10 130150410 130152139 -10164626 + L1MC1 LINE L1 3539 5312 -834 581 218 91 0 chr10 130152139 130152249 -10164516 + FLAM_A SINE Alu 1 120 -13 6451 210 65 43 chr10 130152249 130152335 -10164430 + L1MC1 LINE L1 5312 5395 -751 973 137 48 0 chr10 130152336 130152482 -10164283 + AluJo SINE Alu 1 153 -159 1508 141 32 16 chr10 130152483 130152731 -10164034 + AluJo SINE Alu 56 307 -5 5382 118 35 75 chr10 130152731 130153715 -10163050 + L1MC1 LINE L1 5390 6333 0 862 177 54 14 chr10 130153824 130153971 -10162794 + AluJo SINE Alu 136 288 -24 380 248 7 34 chr10 130154300 130154449 -10162316 + L1PB1 LINE L1 4256 4400 -1746 231 213 113 0 chr10 130154471 130154551 -10162214 + L1MC4 LINE L1 6615 6703 -1339 * 303 261 23 0 chr10 130154535 130154623 -10162142 - L1MC4 LINE L1 -1339 6703 6614 274 278 0 0 chr10 130154561 130154651 -10162114 + L1MC4 LINE L1 6614 6703 -1339 * 312 91 0 0 chr10 130154651 130154695 -10162070 + (CA)n Simple_repeat Simple_repeat 2 45 0 5984 145 39 12 chr10 130154696 130156392 -10160373 + L1PB1 LINE L1 4415 6147 -4 36 44 0 15 chr10 130156442 130156461 -10160304 + AT_rich Low_complexity Low_complexity 1 19 -48 3154 18 0 3 chr10 130156461 130156802 -10159963 - L1PA3 LINE L1 -3 6152 5813 36 44 0 15 chr10 130156802 130156850 -10159915 + AT_rich Low_complexity Low_complexity 19 67 0 279 284 9 46 chr10 130157004 130157113 -10159652 + MER5A DNA MER1_type 1 105 -84 226 204 57 68 chr10 130157044 130157132 -10159633 - MER5A DNA MER1_type -26 163 77 * 2133 160 59 37 chr10 130157205 130157728 -10159037 + MLT2A2 LTR ERVL 1 554 0 570 249 30 12 chr10 130157744 130157909 -10158856 + MER5A DNA MER1_type 22 189 0 416 326 47 0 chr10 130158797 130158926 -10157839 + MIR3 SINE MIR 5 139 -69 320 362 61 31 chr10 130158994 130159190 -10157575 + L2 LINE L2 2734 2935 -379 1679 186 24 41 chr10 130159191 130159611 -10157154 - L1MDb LINE L1 -5390 1019 468 1058 279 167 0 chr10 130159620 130159985 -10156780 - L1MDb LINE L1 -5982 427 2 949 240 94 57 chr10 130163571 130163848 -10152917 + LTR56 LTR ERV1 27 325 -120 2242 114 0 0 chr10 130163848 130164147 -10152618 - AluSx SINE Alu -13 299 1 949 240 94 57 chr10 130164147 130164273 -10152492 + LTR56 LTR ERV1 325 445 0 975 174 37 37 chr10 130164482 130164700 -10152065 + AluJb SINE Alu 85 302 -10 226 203 114 25 chr10 130164702 130164781 -10151984 - LTR41 LTR ERVL -64 709 624 241 280 140 0 chr10 130165288 130165395 -10151370 + MIR SINE MIR 25 146 -116 716 274 104 56 chr10 130166042 130166646 -10150119 + L2 LINE L2 2673 3313 0 2477 148 21 71 chr10 130166903 130167384 -10149381 + LTR32 LTR ERVL 15 471 0 14631 27 6 0 chr10 130167721 130169452 -10147313 - L1PA4 LINE L1 -1665 4481 2740 8153 30 3 2 chr10 130169452 130171123 -10145642 + L1PA4 LINE L1 4481 6152 -3 310 328 98 8 chr10 130171461 130171726 -10145039 + L1ME LINE L1 5506 5794 -327 21574 159 49 20 chr10 130171770 130176660 -10140105 + L1M1 LINE L1 12 5102 -2463 834 56 0 0 chr10 130176660 130176768 -10139997 + (GAAA)n Simple_repeat Simple_repeat 4 111 0 21574 159 49 20 chr10 130176768 130177527 -10139238 + L1M1 LINE L1 5102 5838 -1727 661 272 81 27 chr10 130177648 130177847 -10138918 + MER66A LTR ERV1 195 413 -65 1548 45 0 0 chr10 130177847 130178024 -10138741 - L1PA4 LINE L1 -7 6148 5972 661 272 81 27 chr10 130178024 130178085 -10138680 + MER66A LTR ERV1 413 469 -9 390 186 0 0 chr10 130178243 130178302 -10138463 + Tigger3(Golem) DNA MER2_type 2 60 -2969 640 116 32 0 chr10 130178302 130178397 -10138368 - LTR32 LTR ERVL 0 471 374 2903 120 71 2 chr10 130178763 130179228 -10137537 + L1MC1 LINE L1 5814 6310 -23 789 202 0 8 chr10 130179480 130179609 -10137156 - FLAM_C SINE Alu -5 128 1 1855 136 37 0 chr10 130179697 130179997 -10136768 + AluSx SINE Alu 1 310 0 417 295 13 13 chr10 130180809 130180965 -10135800 - MER41B LTR ERV1 -205 430 275 1888 109 69 7 chr10 130182969 130183245 -10133520 + AluSq SINE Alu 1 293 -20 1336 218 100 9 chr10 130183245 130183566 -10133199 + Charlie1 DNA MER1_type 1 350 -2411 374 178 172 3 chr10 130183617 130183803 -10132962 + Charlie1 DNA MER1_type 2493 2760 -1 3750 218 96 32 chr10 130183826 130185657 -10131108 - L1MD2 LINE L1 -2 6357 4395 2732 239 55 56 chr10 130185717 130186780 -10129985 - L1MD2 LINE L1 -2474 3672 2612 222 290 215 0 chr10 130187206 130187313 -10129452 - L3 LINE CR1 -45 1532 1403 655 264 136 9 chr10 130187970 130188190 -10128575 - MIR SINE MIR -2 260 13 566 253 13 32 chr10 130188896 130189050 -10127715 - L2 LINE L2 0 3313 3163 285 169 22 34 chr10 130189065 130189154 -10127611 + A-rich Low_complexity Low_complexity 3 90 0 3550 138 21 29 chr10 130189713 130190342 -10126423 + L1MB1 LINE L1 5538 6161 -28 29 28 0 0 chr10 130191808 130191844 -10124921 + AT_rich Low_complexity Low_complexity 1 36 0 13129 21 0 0 chr10 130192006 130194310 -10122455 + L1PA3 LINE L1 3851 6155 0 426 326 62 17 chr10 130194313 130194491 -10122274 - MER5A DNA MER1_type -1 188 3 319 296 23 0 chr10 130194760 130194848 -10121917 + L1MC4 LINE L1 6614 6703 -1339 212 184 0 0 chr10 130194848 130194886 -10121879 + (TA)n Simple_repeat Simple_repeat 2 39 0 3921 135 63 14 chr10 130194886 130195583 -10121182 + Tigger3b DNA MER2_type 6 736 -495 1104 112 6 29 chr10 130195583 130195753 -10121012 + AluSx SINE Alu 1 166 -146 2256 92 100 8 chr10 130245795 130246186 -10070579 - L1P4 LINE L1 -488 5680 5254 2847 130 33 28 chr10 130246187 130246785 -10069980 - L1P4 LINE L1 -1689 4457 3857 203 322 210 10 chr10 130247526 130247731 -10069034 + MIR SINE MIR 7 252 -10 904 113 0 0 chr10 130248407 130248531 -10068234 + AluSq/x SINE Alu 1 124 -189 267 267 20 53 chr10 130248560 130248710 -10068055 + L1MEd LINE L1 1064 1208 -4911 248 252 0 48 chr10 130248725 130248828 -10067937 + HAL1 LINE L1 1357 1454 -1053 447 192 51 51 chr10 130248832 130248988 -10067777 + MLT2D LTR ERVL 5 160 -254 5156 114 39 4 chr10 130249604 130250448 -10066317 + L1PA7 LINE L1 5262 6135 -19 389 237 0 30 chr10 130250481 130250612 -10066153 - THE1-int LTR MaLR -1083 497 371 228 86 0 0 chr10 130251007 130251042 -10065723 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1341 58 6 0 chr10 130251045 130251218 -10065547 - L1PA4 LINE L1 -6 6149 5976 42 0 0 0 chr10 130252021 130252063 -10064702 + AT_rich Low_complexity Low_complexity 1 42 0 1360 232 69 0 chr10 130252172 130252461 -10064304 - AluJo SINE Alu 0 312 4 330 253 152 44 chr10 130252664 130252822 -10063943 + MLT1D LTR MaLR 323 497 -8 308 117 83 0 chr10 130253131 130253191 -10063574 - MSTA LTR MaLR 0 428 364 2125 105 20 14 chr10 130253191 130253487 -10063278 + AluSc SINE Alu 1 298 -11 324 102 0 0 chr10 130253487 130253536 -10063229 + (GA)n Simple_repeat Simple_repeat 1 49 0 2226 124 25 3 chr10 130253536 130253898 -10062867 - MSTA LTR MaLR -56 372 3 721 171 5 54 chr10 130253918 130254140 -10062625 - MSTA-int LTR MaLR -16 1635 1425 212 279 35 23 chr10 130254312 130254398 -10062367 + MIR SINE MIR 64 150 -58 1092 120 45 10 chr10 130254466 130254666 -10062099 + THE1C LTR MaLR 169 375 0 309 357 24 0 chr10 130254782 130254908 -10061857 - MIR SINE MIR -84 178 50 34 0 0 0 chr10 130254958 130254992 -10061773 + AT_rich Low_complexity Low_complexity 1 34 0 1652 24 0 0 chr10 130255555 130255762 -10061003 - L1P LINE L1 -1022 5124 4918 225 352 11 0 chr10 130255757 130255848 -10060917 + HAL1 LINE L1 1654 1745 -762 * 731 208 151 53 chr10 130256208 130256545 -10060220 - MLT2C2 LTR ERVL 0 464 95 2128 160 18 0 chr10 130256709 130257384 -10059381 - L1P4 LINE L1 -577 5588 4904 266 176 0 83 chr10 130257393 130257501 -10059264 + L1PA11 LINE L1 6061 6159 -15 1254 95 0 0 chr10 130257910 130258100 -10058665 - L1P LINE L1 -818 5328 5139 * 4918 42 2 3 chr10 130258098 130258738 -10058027 + L1P LINE L1 4503 5141 -1005 396 249 16 22 chr10 130258736 130258921 -10057844 - L1MDa LINE L1 -3569 2971 2788 * 309 127 48 0 chr10 130259406 130259469 -10057296 + L1MA9 LINE L1 6207 6272 -40 21 0 0 0 chr10 130259715 130259736 -10057029 + AT_rich Low_complexity Low_complexity 1 21 0 2293 90 0 3 chr10 130259744 130260045 -10056720 + AluY SINE Alu 1 300 -11 738 285 85 26 chr10 130260277 130260737 -10056028 - L1MB7 LINE L1 -1 6183 5697 1226 260 61 52 chr10 130260900 130261259 -10055506 - L1MB7 LINE L1 -2555 3591 3237 1464 205 42 10 chr10 130261259 130261547 -10055218 + AluJb SINE Alu 1 297 -15 1226 260 61 52 chr10 130261547 130261571 -10055194 - L1MB7 LINE L1 -2909 3237 3215 3022 132 8 10 chr10 130261571 130262063 -10054702 - L1PB3 LINE L1 -3 6151 5661 1226 260 61 52 chr10 130262063 130262448 -10054317 - L1MB7 LINE L1 -2931 3215 2815 225 263 45 23 chr10 130263034 130263167 -10053598 + MER103 DNA DNA 12 147 -19 586 89 0 0 chr10 130263193 130263272 -10053493 - MADE1 DNA Mariner -1 79 1 492 224 37 15 chr10 130264282 130264416 -10052349 + MLT1B LTR MaLR 250 386 -4 22 0 0 0 chr10 130264443 130264465 -10052300 + AT_rich Low_complexity Low_complexity 1 22 0 278 155 60 52 chr10 130265507 130265623 -10051142 - L1MDa LINE L1 -3901 2639 2523 954 257 98 22 chr10 130265687 130266134 -10050631 - L1MDa LINE L1 -5212 1331 851 705 299 53 17 chr10 130266457 130266758 -10050007 - L1MDa LINE L1 -6196 344 33 3538 214 22 30 chr10 130267284 130268244 -10048521 - L1P LINE L1 -3525 2621 1670 633 258 9 13 chr10 130268244 130268477 -10048288 + L1MC4a LINE L1 4105 4336 -1810 274 330 28 9 chr10 130268757 130268863 -10047902 - MIR3 SINE MIR -26 182 75 23 33 0 0 chr10 130268999 130269029 -10047736 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 130269164 130269186 -10047579 + AT_rich Low_complexity Low_complexity 1 22 0 1898 142 40 37 chr10 130269269 130269643 -10047122 + THE1C LTR MaLR 1 375 0 397 352 131 3 chr10 130269655 130270050 -10046715 + L1MC4a LINE L1 5452 5794 -327 1953 118 18 4 chr10 130270285 130270587 -10046178 - AluSp SINE Alu 0 306 1 1195 198 18 57 chr10 130270587 130270921 -10045844 - L1MB8 LINE L1 -63 6115 5795 1680 68 16 36 chr10 130271410 130271660 -10045105 - AluY SINE Alu -28 283 39 475 59 0 0 chr10 130271859 130271927 -10044838 - Alu SINE Alu -3 308 241 2097 134 10 0 chr10 130272451 130272749 -10044016 - AluSx SINE Alu -11 301 1 7778 48 2 28 chr10 130273215 130274406 -10042359 - L1P LINE L1 -2903 3243 2084 305 271 144 8 chr10 130274899 130274923 -10041842 - L1ME3A LINE L1 -267 5903 5884 2310 103 6 0 chr10 130274923 130275234 -10041531 - AluSp SINE Alu 0 313 1 305 271 144 8 chr10 130275234 130275327 -10041438 - L1ME3A LINE L1 -286 5884 5770 506 237 191 13 chr10 130275342 130275593 -10041172 - L1ME3A LINE L1 -421 5700 5398 24 0 0 0 chr10 130276055 130276079 -10040686 + AT_rich Low_complexity Low_complexity 1 24 0 331 186 0 0 chr10 130276348 130276407 -10040358 - L1MCa LINE L1 -6344 82 24 200 167 42 21 chr10 130277139 130277187 -10039578 + L2 LINE L2 3222 3270 -2 208 283 0 0 chr10 130277236 130277289 -10039476 + MIR SINE MIR 102 154 -108 221 271 42 76 chr10 130277535 130277679 -10039086 - L2 LINE L2 -222 3050 2912 660 200 106 12 chr10 130278468 130278638 -10038127 + MIR SINE MIR 63 248 -14 514 157 116 0 chr10 130278688 130278835 -10037930 - L1PBa LINE L1 -4682 2181 2018 3449 211 30 3 chr10 130278973 130280274 -10036491 - L1MCa LINE L1 -3456 3188 1851 687 219 98 0 chr10 130280881 130281096 -10035669 - L1ME1 LINE L1 -3 6163 5928 717 174 70 0 chr10 130282073 130282245 -10034520 - L1MCa LINE L1 -4990 1654 1471 2378 188 31 27 chr10 130282247 130282963 -10033802 - L1MCa LINE L1 -4851 1274 645 565 254 51 11 chr10 130282946 130283123 -10033642 - L1MCa LINE L1 -6353 189 6 * 418 287 49 15 chr10 130283465 130283784 -10032981 - L1ME1 LINE L1 -768 5378 5148 991 175 17 45 chr10 130283798 130284090 -10032675 + L1MB1 LINE L1 5689 5972 -196 784 164 32 50 chr10 130284092 130284311 -10032454 + AluSx SINE Alu 1 215 -97 209 325 131 0 chr10 130286092 130286252 -10030513 - L2 LINE L2 -170 3143 2963 27 0 0 0 chr10 130287443 130287470 -10029295 + AT_rich Low_complexity Low_complexity 1 27 0 1636 178 70 0 chr10 130287470 130287757 -10029008 - AluSx SINE Alu -1 311 5 267 276 35 11 chr10 130288356 130288443 -10028322 - MIR SINE MIR -102 160 72 258 81 0 0 chr10 130288728 130288765 -10028000 + (CA)n Simple_repeat Simple_repeat 2 38 0 341 264 33 0 chr10 130289164 130289255 -10027510 + MIR3 SINE MIR 113 206 -2 1013 291 12 2 chr10 130290329 130290735 -10026030 - L1 LINE L1 -3156 2990 2581 4349 53 22 0 chr10 130290778 130291329 -10025436 - L1PA5 LINE L1 -1 6153 5591 294 206 0 27 chr10 130291446 130291519 -10025246 - L1MC1 LINE L1 -1 6332 6262 23 33 0 0 chr10 130291738 130291768 -10024997 + AT_rich Low_complexity Low_complexity 1 30 0 337 234 131 21 chr10 130291951 130292096 -10024669 - MLT1E1 LTR MaLR -388 266 106 23 33 0 0 chr10 130292394 130292424 -10024341 + AT_rich Low_complexity Low_complexity 1 30 0 1897 124 29 63 chr10 130293742 130294090 -10022675 - MER1B DNA MER1_type 0 337 2 262 257 0 40 chr10 130294371 130294445 -10022320 + MIR SINE MIR 71 141 -67 25 31 0 0 chr10 130294452 130294484 -10022281 + AT_rich Low_complexity Low_complexity 1 32 0 542 225 113 6 chr10 130294887 130295047 -10021718 + MER5B DNA MER1_type 2 178 0 413 324 83 20 chr10 130295061 130295265 -10021500 + MIR SINE MIR 43 259 -3 1946 139 10 0 chr10 130296067 130296362 -10020403 - AluSx SINE Alu -14 298 1 213 309 94 34 chr10 130297744 130297893 -10018872 + MIR3 SINE MIR 2 159 -49 205 261 58 14 chr10 130297975 130298044 -10018721 + MIR3 SINE MIR 86 157 -51 5212 221 71 12 chr10 130298397 130300111 -10016654 + L1 LINE L1 2728 4542 -1604 21 57 0 0 chr10 130300643 130300678 -10016087 + AT_rich Low_complexity Low_complexity 1 35 0 537 253 73 6 chr10 130301254 130301432 -10015333 + HERVL40 LTR ERVL 3372 3561 -1969 1020 149 23 0 chr10 130301637 130301812 -10014953 + MLT1C LTR MaLR 284 462 -5 393 220 0 0 chr10 130302104 130302195 -10014570 - L1MB2 LINE L1 -74 6097 6007 23 0 0 0 chr10 130302285 130302308 -10014457 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr10 130303103 130303126 -10013639 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3344 114 62 35 chr10 130303309 130303976 -10012789 + Tigger3(Golem) DNA MER2_type 2344 3028 -1 238 286 125 9 chr10 130304138 130304250 -10012515 + MIR SINE MIR 117 241 -21 727 285 69 30 chr10 130304289 130304502 -10012263 - L3 LINE CR1 -106 1471 1241 1863 159 64 9 chr10 130304502 130304848 -10011917 + MLT1A1 LTR MaLR 1 365 0 727 285 69 30 chr10 130304848 130304939 -10011826 - L3 LINE CR1 -336 1241 1155 1188 205 138 47 chr10 130305860 130306364 -10010401 - L1MB8 LINE L1 -160 6018 5472 904 252 69 51 chr10 130306362 130306810 -10009955 - L1MEc LINE L1 -5427 969 514 * 243 61 0 0 chr10 130306815 130306848 -10009917 + (TA)n Simple_repeat Simple_repeat 2 34 0 1948 152 3 7 chr10 130306849 130307146 -10009619 - AluSx SINE Alu -16 296 1 1345 171 67 15 chr10 130307191 130307460 -10009305 + AluJo SINE Alu 1 283 -29 1008 112 62 6 chr10 130307463 130307624 -10009141 + THE1B LTR MaLR 195 364 0 12013 87 6 3 chr10 130307624 130309200 -10007565 + THE1B-int LTR MaLR 1 1580 0 2134 146 30 25 chr10 130309200 130309562 -10007203 + THE1B LTR MaLR 1 364 0 2892 124 16 12 chr10 130309587 130310072 -10006693 - Tigger3b DNA MER2_type -686 545 59 321 370 60 40 chr10 130310227 130310416 -10006349 - L2 LINE L2 -338 2976 2792 2367 55 31 0 chr10 130310416 130310706 -10006059 + AluY SINE Alu 1 299 -12 321 370 60 40 chr10 130310706 130310913 -10005852 - L2 LINE L2 -522 2792 2572 629 254 109 60 chr10 130311144 130311657 -10005108 + MLT1H1 LTR MaLR 21 555 0 1725 154 42 0 chr10 130312049 130312361 -10004404 - L1PB4 LINE L1 -3 6153 5829 689 255 42 28 chr10 130313536 130313748 -10003017 - MIR SINE MIR -30 232 18 968 230 20 5 chr10 130314168 130314372 -10002393 + MER20 DNA MER1_type 3 209 -10 310 243 30 118 chr10 130314625 130314794 -10001971 - MIR SINE MIR -30 232 79 584 246 53 60 chr10 130315012 130315297 -10001468 + L2 LINE L2 2468 2750 -564 7287 189 58 38 chr10 130315304 130316195 -10000570 + L1MD2 LINE L1 592 1464 -5076 1302 167 69 83 chr10 130316195 130316543 -10000222 - MER2 DNA MER2_type 0 344 2 7287 189 58 38 chr10 130316543 130317690 -9999075 + L1MD2 LINE L1 1464 2668 -3872 1832 161 28 9 chr10 130317690 130317724 -9999041 - MER2 DNA MER2_type -13 332 300 555 100 0 0 chr10 130317724 130317804 -9998961 + MADE1 DNA Mariner 1 80 0 1832 161 28 9 chr10 130317804 130318093 -9998672 - MER2 DNA MER2_type -45 300 3 2059 204 50 33 chr10 130318094 130318877 -9997888 + L1MD2 LINE L1 2689 6539 -50 315 305 148 0 chr10 130318988 130319116 -9997649 + L2 LINE L2 3126 3272 0 1199 184 289 79 chr10 130319340 130319692 -9997073 + L1MC4 LINE L1 7196 7473 -569 1596 167 4 0 chr10 130319692 130319931 -9996834 + AluJo SINE Alu 49 288 -24 1199 184 289 79 chr10 130319931 130320278 -9996487 + L1MC4 LINE L1 7473 8042 0 325 295 31 8 chr10 130321741 130321870 -9994895 + L1ME4a LINE L1 5793 5924 -197 1502 164 87 28 chr10 130321890 130322177 -9994588 + AluJo SINE Alu 1 304 -8 4797 65 16 0 chr10 130322450 130323076 -9993689 + L1PA13 LINE L1 5525 6160 -3 279 286 0 12 chr10 130324081 130324165 -9992600 - MIR SINE MIR -6 256 174 921 171 17 17 chr10 130324398 130324574 -9992191 - AluJb SINE Alu -14 298 123 1909 117 3 36 chr10 130324574 130324882 -9991883 - AluSx SINE Alu 0 312 15 274 275 66 22 chr10 130325489 130325580 -9991185 - MIR SINE MIR -111 151 57 2120 70 44 0 chr10 130325852 130326164 -9990601 - AluY SINE Alu 0 324 1 395 192 0 30 chr10 130326172 130326271 -9990494 - L1MA3 LINE L1 0 6305 6210 431 299 152 8 chr10 130326724 130327125 -9989640 + L1M4 LINE L1 4770 5228 -918 321 309 42 30 chr10 130327379 130327547 -9989218 + L2 LINE L2 3140 3309 -4 237 65 0 0 chr10 130328337 130328368 -9988397 + (A)n Simple_repeat Simple_repeat 1 31 0 206 261 67 42 chr10 130328900 130329019 -9987746 + L2 LINE L2 2185 2306 -1008 278 279 236 8 chr10 130329019 130329273 -9987492 + L2 LINE L2 2446 2757 -557 1814 158 84 53 chr10 130329292 130329767 -9986998 - MLT1D LTR MaLR 0 505 16 1691 154 22 4 chr10 130331201 130331468 -9985297 - AluSg SINE Alu -38 272 1 2780 63 17 0 chr10 130332282 130332631 -9984134 - THE1A LTR MaLR 0 355 1 2596 71 3 0 chr10 130332631 130332981 -9983784 - THE1A-int LTR MaLR 0 1580 1230 2484 92 0 0 chr10 130332980 130333329 -9983436 - THE1A-int LTR MaLR -1231 349 1 * 2578 86 17 3 chr10 130333329 130333679 -9983086 - THE1A LTR MaLR 0 355 1 306 295 173 14 chr10 130334848 130334987 -9981778 - MIR3 SINE MIR -6 202 42 235 261 102 45 chr10 130335915 130336003 -9980762 - L2 LINE L2 -6 3266 3174 720 271 111 19 chr10 130336117 130336324 -9980441 - MIR SINE MIR 0 262 37 1236 178 37 8 chr10 130336697 130336939 -9979826 + AluJb SINE Alu 64 312 0 510 348 83 7 chr10 130337201 130337491 -9979274 + L1M4 LINE L1 2235 2546 -3600 317 263 144 42 chr10 130337576 130337726 -9979039 + L1M4 LINE L1 2686 2819 -3327 2110 79 35 10 chr10 130337726 130338016 -9978749 + AluSx SINE Alu 2 298 -14 317 263 144 42 chr10 130338016 130338079 -9978686 + L1M4 LINE L1 2819 2874 -3272 1764 138 18 11 chr10 130338079 130338391 -9978374 + AluSx SINE Alu 1 314 0 317 263 144 42 chr10 130338391 130338411 -9978354 + L1M4 LINE L1 2874 2945 -3201 375 276 146 61 chr10 130338449 130338695 -9978070 + L1MC4a LINE L1 5669 5935 -1873 997 169 0 11 chr10 130338729 130338907 -9977858 + FRAM SINE Alu 1 40 0 515 197 161 62 chr10 130339530 130339723 -9977042 + MER58C DNA MER1_type 4 215 0 2395 193 19 23 chr10 130339909 130340385 -9976380 + MER44D DNA MER2_type 25 498 -207 2303 90 0 0 chr10 130340764 130341065 -9975700 - AluSg SINE Alu -9 301 1 330 230 143 40 chr10 130341209 130341335 -9975430 + MER5A DNA MER1_type 43 181 -8 1023 172 46 30 chr10 130342116 130342378 -9974387 - Zaphod DNA AcHobo -3283 748 483 470 336 48 14 chr10 130342953 130343161 -9973604 + L2 LINE L2 2517 2731 -583 662 247 6 0 chr10 130343397 130343555 -9973210 - MER3 DNA MER1_type -85 124 13 264 267 35 23 chr10 130344456 130344542 -9972223 - MIR SINE MIR -58 150 64 214 400 12 0 chr10 130344522 130344607 -9972158 + MIR SINE MIR 6 91 -171 * 1441 202 70 18 chr10 130344623 130344950 -9971815 - MLT1A1 LTR MaLR -16 349 6 1035 115 0 0 chr10 130345712 130345869 -9970896 + (CA)n Simple_repeat Simple_repeat 2 158 0 391 298 44 0 chr10 130347408 130347522 -9969243 + MIR SINE MIR 11 129 -133 1607 148 7 47 chr10 130347579 130347773 -9968992 - L1PA16 LINE L1 -9 6157 5978 1968 134 28 0 chr10 130347773 130348064 -9968701 - AluSg SINE Alu -11 299 1 1607 148 7 47 chr10 130348064 130348166 -9968599 - L1PA16 LINE L1 -188 5978 5873 237 299 131 0 chr10 130348168 130348275 -9968490 + MIR SINE MIR 124 244 -18 255 125 0 0 chr10 130349607 130349647 -9967118 + (CA)n Simple_repeat Simple_repeat 2 41 0 283 301 19 10 chr10 130351297 130351400 -9965365 + MIR3 SINE MIR 85 188 -20 243 220 40 0 chr10 130351976 130352026 -9964739 + L2 LINE L2 3221 3272 0 310 282 197 8 chr10 130352218 130352335 -9964430 + L2 LINE L2 3134 3272 0 187 233 47 0 chr10 130352409 130352452 -9964313 + L2 LINE L2 3228 3272 0 426 148 61 168 chr10 130352520 130352599 -9964166 - MER53 DNA DNA 0 189 103 2175 118 0 6 chr10 130352599 130352913 -9963852 - AluJb SINE Alu 0 312 1 426 148 61 168 chr10 130352913 130353029 -9963736 - MER53 DNA DNA -86 103 15 329 264 23 50 chr10 130353104 130353271 -9963494 - MLT1J LTR MaLR -167 448 207 386 245 62 29 chr10 130353327 130353536 -9963229 + L1MC5 LINE L1 7633 7979 -63 1803 112 4 11 chr10 130353596 130353865 -9962900 - AluSx SINE Alu -8 304 38 845 220 0 12 chr10 130353888 130354056 -9962709 + FRAM SINE Alu 1 166 0 1730 157 0 0 chr10 130354098 130354430 -9962335 - AluSx SINE Alu 0 332 1 242 284 25 12 chr10 130354541 130354622 -9962143 - MLT1L LTR MaLR -530 85 4 2416 147 7 19 chr10 130355246 130355675 -9961090 + L1MB8 LINE L1 5746 6169 -9 1911 164 3 0 chr10 130355677 130355988 -9960777 - AluSx SINE Alu 0 312 1 1602 183 3 13 chr10 130356017 130356329 -9960436 + AluJb SINE Alu 3 311 -1 501 207 45 9 chr10 130357814 130357925 -9958840 + ORSL DNA AcHobo 4 118 -157 764 165 0 16 chr10 130357932 130358059 -9958706 + FLAM_C SINE Alu 5 129 -4 26 30 0 0 chr10 130358100 130358133 -9958632 + AT_rich Low_complexity Low_complexity 1 33 0 431 144 176 65 chr10 130358136 130358289 -9958476 + ORSL DNA AcHobo 106 275 0 23 33 0 0 chr10 130358817 130358847 -9957918 + AT_rich Low_complexity Low_complexity 1 30 0 309 274 70 51 chr10 130359469 130359626 -9957139 - MIR SINE MIR -43 219 60 200 299 41 91 chr10 130360381 130360480 -9956285 - L2 LINE L2 -214 3058 2972 2333 153 21 0 chr10 130360480 130360860 -9955905 + MLT1B LTR MaLR 1 388 -2 200 299 41 91 chr10 130360860 130360957 -9955808 - L2 LINE L2 -300 2972 2872 1480 206 106 34 chr10 130361422 130361893 -9954872 + MLT1D LTR MaLR 1 505 0 2135 109 0 3 chr10 130362876 130363170 -9953595 + AluSc SINE Alu 1 293 -16 735 173 11 17 chr10 130363281 130363460 -9953305 + (TGAA)n Simple_repeat Simple_repeat 1 178 0 825 190 0 0 chr10 130363497 130363676 -9953089 + (TGAA)n Simple_repeat Simple_repeat 1 179 0 710 207 6 0 chr10 130363637 130363816 -9952949 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 * 491 281 94 23 chr10 130364838 130365009 -9951756 + MIR SINE MIR 34 216 -46 189 0 0 0 chr10 130365464 130365485 -9951280 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 217 286 114 29 chr10 130366578 130366683 -9950082 + MIR SINE MIR 139 252 -10 326 291 30 30 chr10 130366695 130366829 -9949936 - MIR SINE MIR -59 203 70 610 249 159 5 chr10 130367004 130367193 -9949572 + L3 LINE CR1 1354 1571 -6 412 216 248 0 chr10 130367297 130367422 -9949343 - MER3 DNA MER1_type -53 156 1 973 276 134 11 chr10 130368804 130369155 -9947610 + L3 LINE CR1 1183 1576 -1 239 301 106 18 chr10 130371344 130371457 -9945308 - MIR SINE MIR -69 139 17 358 235 0 17 chr10 130371511 130371626 -9945139 + CT-rich Low_complexity Low_complexity 1 113 0 234 255 0 0 chr10 130372290 130372341 -9944424 + MER5A DNA MER1_type 76 126 -63 416 299 25 38 chr10 130372573 130372730 -9944035 - MIR3 SINE MIR -14 194 40 1594 196 0 16 chr10 130372814 130372951 -9943814 + AluJb SINE Alu 1 139 -173 2305 80 0 3 chr10 130372951 130373250 -9943515 + AluSq SINE Alu 1 298 -15 1594 196 0 16 chr10 130373250 130373429 -9943336 + AluJb SINE Alu 139 312 0 1957 224 52 7 chr10 130375116 130375558 -9941207 + MLT1C LTR MaLR 6 467 0 577 246 34 36 chr10 130375774 130375967 -9940798 - MIR SINE MIR -11 251 62 2133 103 0 22 chr10 130376442 130376762 -9940003 + AluSq SINE Alu 1 313 0 2589 32 3 0 chr10 130376806 130377116 -9939649 + AluY SINE Alu 1 311 0 380 203 0 13 chr10 130377330 130377409 -9939356 + MLT1K LTR MaLR 165 242 -346 232 300 40 20 chr10 130377531 130377631 -9939134 + MLT1K LTR MaLR 454 555 -33 220 209 0 0 chr10 130379604 130379647 -9937118 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 549 229 68 57 chr10 130379647 130379839 -9936926 - L2 LINE L2 0 3313 3120 346 174 302 0 chr10 130380140 130380226 -9936539 + MER81 DNA DNA 2 113 -1 1826 121 23 36 chr10 130380358 130380663 -9936102 - AluSx SINE Alu -11 301 1 414 282 175 15 chr10 130380724 130380930 -9935835 + MIR SINE MIR 24 262 0 386 208 128 101 chr10 130381630 130381779 -9934986 - MER5A DNA MER1_type -3 186 23 232 219 211 65 chr10 130382018 130382141 -9934624 - MIR3 SINE MIR -59 149 9 403 224 68 73 chr10 130382555 130382654 -9934111 - MIR SINE MIR -58 150 90 1916 205 65 25 chr10 130382654 130382809 -9933956 + MLT1D LTR MaLR 5 152 -353 2366 65 0 7 chr10 130382809 130383117 -9933648 - AluY SINE Alu -5 306 1 1916 205 65 25 chr10 130383117 130383439 -9933326 + MLT1D LTR MaLR 152 501 -4 403 224 68 73 chr10 130383439 130383514 -9933251 - MIR SINE MIR -118 90 16 719 183 32 0 chr10 130384805 130384931 -9931834 - FLAM_C SINE Alu -3 130 1 1995 115 92 11 chr10 130385013 130385360 -9931405 + THE1C LTR MaLR 1 375 0 385 304 250 0 chr10 130385434 130385602 -9931163 - MIR SINE MIR -3 259 50 1902 125 0 4 chr10 130385668 130385949 -9930816 - AluSx SINE Alu -20 292 13 405 298 20 26 chr10 130387692 130387843 -9928922 - MIR SINE MIR -56 206 57 2346 203 45 23 chr10 130388008 130388055 -9928710 + L1ME2 LINE L1 5566 5610 -724 1806 118 129 0 chr10 130388055 130388387 -9928378 + THE1C LTR MaLR 1 375 0 2346 203 45 23 chr10 130388387 130388934 -9927831 + L1ME2 LINE L1 5610 6331 -3 594 288 40 15 chr10 130389135 130389333 -9927432 - MLT1J LTR MaLR -308 203 1 269 257 54 0 chr10 130389896 130389970 -9926795 + LTR67 LTR ERVL 115 192 -365 1841 124 11 8 chr10 130390655 130390922 -9925843 + AluJb SINE Alu 24 291 -21 2455 89 3 0 chr10 130391110 130391413 -9925352 + AluSq SINE Alu 1 304 -9 462 287 101 65 chr10 130391646 130391799 -9924966 - L1ME4a LINE L1 -1 6120 5974 396 0 0 0 chr10 130391799 130391843 -9924922 + (CA)n Simple_repeat Simple_repeat 2 45 0 462 287 101 65 chr10 130391843 130392379 -9924386 - L1ME4a LINE L1 -147 5974 5406 1630 186 82 0 chr10 130392480 130392760 -9924005 - AluJo SINE Alu -9 303 1 261 183 0 0 chr10 130392771 130392831 -9923934 + (TA)n Simple_repeat Simple_repeat 2 61 0 2068 126 3 3 chr10 130392832 130393118 -9923647 - AluSq SINE Alu -27 286 1 281 206 216 20 chr10 130393641 130393743 -9923022 + MIR SINE MIR 20 141 -67 2715 43 0 0 chr10 130393852 130394152 -9922613 - AluY SINE Alu -11 300 1 452 304 109 32 chr10 130396390 130396703 -9920062 + LTR16C LTR ERVL 155 491 0 213 170 19 19 chr10 130396703 130396756 -9920009 + MIR SINE MIR 69 121 -141 526 289 44 17 chr10 130396770 130396950 -9919815 - MIR SINE MIR -2 260 76 1501 191 70 18 chr10 130396954 130397295 -9919470 + MLT1A1 LTR MaLR 7 365 0 281 222 32 0 chr10 130397295 130397358 -9919407 - MIR SINE MIR -181 81 17 1563 162 15 15 chr10 130397764 130398035 -9918730 + AluJo SINE Alu 42 312 0 1188 97 179 0 chr10 130398297 130398492 -9918273 + MER30 DNA MER1_type 1 230 0 281 341 43 14 chr10 130399507 130399645 -9917120 + L2 LINE L2 3160 3301 -12 415 223 58 58 chr10 130400036 130400175 -9916590 - MLT1H LTR MaLR 0 549 411 4586 143 19 26 chr10 130400772 130400979 -9915786 - L1MB1 LINE L1 -1 6167 5960 2298 108 0 13 chr10 130400979 130401294 -9915471 - AluSx SINE Alu -1 311 1 4586 143 19 26 chr10 130401294 130401929 -9914836 - L1MB1 LINE L1 -208 5960 5331 216 387 42 18 chr10 130401974 130402356 -9914409 + L2 LINE L2 2459 2849 -465 203 376 103 0 chr10 130402575 130402692 -9914073 + L2 LINE L2 3136 3264 -8 216 247 144 68 chr10 130403082 130403228 -9913537 - MIR3 SINE MIR -2 206 50 1521 219 11 24 chr10 130403254 130403624 -9913141 + MLT1A1 LTR MaLR 1 365 0 456 353 72 10 chr10 130403676 130403883 -9912882 - MIR SINE MIR -12 250 31 1268 233 70 68 chr10 130404425 130404746 -9912019 + L1ME3A LINE L1 5601 5925 -245 1903 163 0 26 chr10 130404746 130405052 -9911713 + AluSx SINE Alu 1 298 -14 1268 233 70 68 chr10 130405052 130405227 -9911538 + L1ME3A LINE L1 5925 6098 -72 1149 240 71 27 chr10 130405445 130405941 -9910824 - MLT1E LTR MaLR -2 591 24 398 139 42 0 chr10 130405945 130406017 -9910748 + MLT1C LTR MaLR 9 83 -384 760 230 5 52 chr10 130406024 130406215 -9910550 + MLT1C LTR MaLR 286 467 0 293 282 75 121 chr10 130406459 130406806 -9909959 + L2 LINE L2 2940 3270 -2 1669 201 85 14 chr10 130407352 130407765 -9909000 - L1MB8 LINE L1 0 6178 5737 181 167 28 0 chr10 130407803 130407839 -9908926 + L2 LINE L2 2703 2739 -575 661 248 91 34 chr10 130407846 130408144 -9908621 + L1ME2 LINE L1 5838 6152 -12 738 171 0 16 chr10 130408237 130408360 -9908405 - FLAM_C SINE Alu -17 126 6 299 226 0 0 chr10 130408706 130408768 -9907997 + MIR SINE MIR 118 179 -83 251 120 0 20 chr10 130409805 130409855 -9906910 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 201 167 24 0 chr10 130412729 130412771 -9903994 + G-rich Low_complexity Low_complexity 5 47 0 225 94 0 0 chr10 130413383 130413415 -9903350 + (CCG)n Simple_repeat Simple_repeat 3 34 0 21 36 0 0 chr10 130413638 130413666 -9903099 + GC_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr10 130414750 130414792 -9901973 + GC_rich Low_complexity Low_complexity 1 42 0 2494 73 0 13 chr10 130415286 130415600 -9901165 - AluSg SINE Alu 0 310 1 21 36 0 0 chr10 130415970 130415998 -9900767 + AT_rich Low_complexity Low_complexity 1 28 0 281 233 82 0 chr10 130422416 130422489 -9894276 + L2 LINE L2 3191 3269 -3 324 299 140 13 chr10 130424130 130424287 -9892478 - MIR SINE MIR -6 256 80 229 333 38 19 chr10 130424532 130424637 -9892128 - MIR SINE MIR -64 144 38 26 0 0 0 chr10 130427276 130427302 -9889463 + GC_rich Low_complexity Low_complexity 1 26 0 26 50 0 0 chr10 130427781 130427821 -9888944 + AT_rich Low_complexity Low_complexity 1 40 0 387 0 0 0 chr10 130429702 130429745 -9887020 + (CA)n Simple_repeat Simple_repeat 2 44 0 252 308 83 23 chr10 130430747 130430880 -9885885 + L2 LINE L2 3126 3266 -6 1912 130 11 4 chr10 130433889 130434166 -9882599 - AluSg SINE Alu -2 308 30 253 263 145 0 chr10 130434196 130434272 -9882493 + L2 LINE L2 3186 3272 0 332 338 59 22 chr10 130434469 130434605 -9882160 - L2 LINE L2 0 3272 3132 200 304 80 45 chr10 130437842 130437954 -9878811 - MIR SINE MIR -57 205 90 24 0 0 0 chr10 130441079 130441103 -9875662 + AT_rich Low_complexity Low_complexity 1 24 0 404 273 91 37 chr10 130443461 130443703 -9873062 + MER112 DNA MER1_type 2 256 0 286 221 96 19 chr10 130444158 130444262 -9872503 - MER103 DNA DNA -44 122 11 659 132 91 0 chr10 130444923 130445044 -9871721 - L1MA9 LINE L1 -2 6310 6179 896 86 0 43 chr10 130445115 130445254 -9871511 - FLAM_C SINE Alu 0 133 1 532 164 109 0 chr10 130445259 130445369 -9871396 - L1MA9 LINE L1 -145 6167 6046 1304 139 101 0 chr10 130445599 130445696 -9871069 - MER30 DNA MER1_type 0 230 144 2211 97 3 13 chr10 130445696 130446004 -9870761 - AluSx SINE Alu -7 305 1 1304 139 101 0 chr10 130446004 130446115 -9870650 - MER30 DNA MER1_type -86 144 1 202 186 47 0 chr10 130446526 130446569 -9870196 - L2 LINE L2 -22 3250 3206 1231 156 14 28 chr10 130447013 130447225 -9869540 + AluJb SINE Alu 87 295 -17 319 212 202 0 chr10 130447225 130447324 -9869441 + MIR SINE MIR 110 228 -34 198 0 0 0 chr10 130448591 130448613 -9868152 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2381 82 10 0 chr10 130450152 130450455 -9866310 - AluY SINE Alu -5 306 1 861 198 64 32 chr10 130452620 130453118 -9863647 + MLT2E LTR ERVL 3 628 0 326 171 14 0 chr10 130453637 130453707 -9863058 + (TCCA)n Simple_repeat Simple_repeat 3 73 0 527 346 28 0 chr10 130453741 130453952 -9862813 + MIR SINE MIR 6 222 -40 7584 52 8 2 chr10 130455064 130456082 -9860683 + L1PA7 LINE L1 5128 6153 -1 653 286 103 5 chr10 130456490 130456693 -9860072 + MIR SINE MIR 37 259 -3 182 143 20 0 chr10 130456722 130456771 -9859994 + (TA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr10 130456932 130456962 -9859803 + AT_rich Low_complexity Low_complexity 1 30 0 4696 130 29 10 chr10 130457225 130457954 -9858811 + L1MB3 LINE L1 5431 6173 -10 2326 102 0 0 chr10 130458220 130458524 -9858241 - AluSx SINE Alu -8 304 1 2609 71 0 0 chr10 130458575 130458886 -9857879 - AluY SINE Alu 0 311 1 688 267 67 99 chr10 130458886 130459008 -9857757 - L1MEd LINE L1 -3060 3069 2945 1685 176 0 46 chr10 130459008 130459332 -9857433 - AluJo SINE Alu -3 309 1 688 267 67 99 chr10 130459332 130460079 -9856686 - L1MEd LINE L1 -3184 2945 2234 2327 107 0 0 chr10 130460079 130460379 -9856386 - AluSx SINE Alu -12 300 1 688 267 67 99 chr10 130460379 130460512 -9856253 - L1MEd LINE L1 -3895 2234 2098 201 74 0 0 chr10 130460881 130460908 -9855857 + (TATG)n Simple_repeat Simple_repeat 2 28 0 427 241 98 32 chr10 130460937 130461200 -9855565 - L1MEd LINE L1 -856 1634 1433 263 163 0 20 chr10 130461200 130461249 -9855516 - MLT2D LTR ERVL 0 464 417 180 231 0 0 chr10 130461259 130461311 -9855454 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 1364 201 51 18 chr10 130461311 130461712 -9855053 - MLT2D LTR ERVL -40 424 5 466 250 48 95 chr10 130461716 130462181 -9854584 - L1MEd LINE L1 -1053 1437 887 2152 109 3 56 chr10 130462181 130462503 -9854262 - AluSp SINE Alu -8 305 1 466 250 48 95 chr10 130462503 130462563 -9854202 - L1MEd LINE L1 -1603 887 826 841 163 47 0 chr10 130462669 130462798 -9853967 - FRAM SINE Alu -20 156 22 276 149 0 0 chr10 130465458 130465505 -9851260 + (T)n Simple_repeat Simple_repeat 1 47 0 388 280 47 47 chr10 130466107 130466257 -9850508 + MIR3 SINE MIR 19 168 -40 531 243 153 31 chr10 130467290 130467512 -9849253 + MIR SINE MIR 14 262 0 222 188 0 42 chr10 130467709 130467757 -9849008 - L2 LINE L2 0 3313 3268 289 301 72 42 chr10 130468374 130468540 -9848225 - MER5A DNA MER1_type -4 185 15 1489 204 140 25 chr10 130468624 130469031 -9847734 + MLT1C LTR MaLR 6 459 -8 218 352 11 0 chr10 130469417 130469505 -9847260 + MIR SINE MIR 52 140 -68 297 296 113 25 chr10 130470578 130470737 -9846028 - MIR SINE MIR -62 200 28 565 214 156 0 chr10 130471100 130471254 -9845511 + MER45A DNA AcHobo 1 178 0 268 227 15 15 chr10 130471260 130471326 -9845439 + MIR SINE MIR 81 146 -116 414 298 81 0 chr10 130471786 130471947 -9844818 + MIR SINE MIR 74 247 -15 1640 199 21 0 chr10 130472020 130472307 -9844458 - AluJb SINE Alu -19 293 1 219 167 0 0 chr10 130472799 130472841 -9843924 + T-rich Low_complexity Low_complexity 1 42 0 3631 161 28 14 chr10 130472841 130473493 -9843272 - L1MB4 LINE L1 -34 6146 5486 2266 105 0 0 chr10 130474484 130474778 -9841987 + AluSx SINE Alu 1 294 -18 386 233 52 26 chr10 130474998 130475114 -9841651 + MIR SINE MIR 31 149 -113 191 319 14 14 chr10 130475336 130475408 -9841357 - MIR SINE MIR -177 85 14 339 267 105 47 chr10 130475603 130475775 -9840990 - L2 LINE L2 0 3313 3132 198 302 250 20 chr10 130475876 130476128 -9840637 - L2 LINE L2 -353 2961 2652 2392 192 9 2 chr10 130477263 130477691 -9839074 - MLT1F LTR MaLR -110 432 2 3068 142 59 16 chr10 130477824 130478317 -9838448 + MLT2B2 LTR ERVL 1 514 -1 1062 150 120 4 chr10 130478340 130478574 -9838191 + Charlie5 DNA MER1_type 2325 2585 -27 275 276 152 9 chr10 130478734 130478839 -9837926 + MIR SINE MIR 25 144 -118 1131 190 0 55 chr10 130479081 130479318 -9837447 - AluJo SINE Alu -88 224 1 276 267 79 10 chr10 130480685 130480786 -9835979 + MIR SINE MIR 23 130 -132 1289 180 0 0 chr10 130480808 130481019 -9835746 - AluJb SINE Alu -16 296 86 1622 270 102 21 chr10 130483303 130484197 -9832568 - L1MB4 LINE L1 -765 5381 4511 691 253 50 9 chr10 130485513 130485734 -9831031 + L1M4 LINE L1 4797 5026 -1120 785 129 9 0 chr10 130485845 130485961 -9830804 - L1PA15 LINE L1 -8 6157 6041 2065 243 115 24 chr10 130485961 130486761 -9830004 - L1MB4 LINE L1 -1645 4501 3629 255 303 107 25 chr10 130486801 130486923 -9829842 - LTR67 LTR ERVL -267 290 159 311 161 0 0 chr10 130487108 130487164 -9829601 - Alu SINE Alu 0 302 247 220 154 10 58 chr10 130487164 130487268 -9829497 + T-rich Low_complexity Low_complexity 3 101 0 187 109 0 43 chr10 130487445 130487491 -9829274 + (TTCTCC)n Simple_repeat Simple_repeat 5 48 0 207 327 26 39 chr10 130487742 130487898 -9828867 + C-rich Low_complexity Low_complexity 1 154 0 322 271 19 19 chr10 130689086 130689193 -9627572 + L2 LINE L2 2890 2996 -276 2685 124 44 5 chr10 130689376 130689788 -9626977 - MSTA LTR MaLR 0 428 1 375 304 84 63 chr10 130689839 130690171 -9626594 - L2 LINE L2 -1 3271 2933 1499 216 49 75 chr10 130690215 130690683 -9626082 + MLT1C LTR MaLR 4 459 -8 203 240 91 58 chr10 130691254 130691375 -9625390 - MIR3 SINE MIR -70 138 14 351 216 167 0 chr10 130691920 130692022 -9624743 + MIR3 SINE MIR 47 165 -43 794 259 52 44 chr10 130692555 130692980 -9623785 - MLT1H LTR MaLR -16 533 41 253 253 117 39 chr10 130693022 130693585 -9623180 - L1MC4 LINE L1 -1280 6528 5948 345 222 222 26 chr10 130693688 130693805 -9622960 - L1MC4 LINE L1 -2148 5660 5521 626 141 0 10 chr10 130694011 130694110 -9622655 - MLT1C LTR MaLR -8 459 362 2273 130 25 19 chr10 130694113 130694475 -9622290 + THE1B LTR MaLR 1 364 0 11994 91 5 2 chr10 130694475 130696051 -9620714 + THE1B-int LTR MaLR 1 1580 0 597 170 78 28 chr10 130696056 130696197 -9620568 + THE1B LTR MaLR 7 154 -210 204 247 52 0 chr10 130696336 130696413 -9620352 + (TTTA)n Simple_repeat Simple_repeat 4 84 0 333 141 70 28 chr10 130696548 130696690 -9620075 + (TA)n Simple_repeat Simple_repeat 1 148 0 232 166 69 7 chr10 130696705 130696850 -9619915 + (TA)n Simple_repeat Simple_repeat 2 155 0 228 248 111 26 chr10 130696924 130697041 -9619724 - MIR SINE MIR -33 229 103 465 180 93 119 chr10 130697622 130697816 -9618949 - MER53 DNA DNA 0 189 1 472 145 113 65 chr10 130698234 130698358 -9618407 - L1ME4a LINE L1 -27 6094 5965 238 254 30 0 chr10 130699369 130699436 -9617329 - MIR SINE MIR 0 262 194 237 319 0 32 chr10 130699844 130699938 -9616827 + MIR SINE MIR 67 157 -105 566 229 38 25 chr10 130699976 130700133 -9616632 - MIR SINE MIR -27 235 77 21 57 0 0 chr10 130702188 130702223 -9614542 + AT_rich Low_complexity Low_complexity 1 35 0 192 77 0 0 chr10 130703257 130703283 -9613482 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr10 130704728 130704758 -9612007 + (TG)n Simple_repeat Simple_repeat 2 31 0 184 289 0 0 chr10 130704782 130704820 -9611945 + MER5A DNA MER1_type 50 87 -102 192 152 0 0 chr10 130705418 130705451 -9611314 + (CAT)n Simple_repeat Simple_repeat 3 35 0 306 203 58 0 chr10 130705572 130705641 -9611124 - MIR SINE MIR -109 153 81 336 324 81 5 chr10 130707390 130707575 -9609190 + MIR3 SINE MIR 5 203 -5 194 211 0 0 chr10 130707654 130707692 -9609073 - MIR SINE MIR -114 148 111 400 252 35 9 chr10 130708859 130708974 -9607791 + MIR SINE MIR 30 147 -115 663 248 34 0 chr10 130709094 130709243 -9607522 - MER58B DNA MER1_type 0 341 188 776 191 18 6 chr10 130709990 130710158 -9606607 - L1PB4 LINE L1 -202 5954 5785 216 0 0 0 chr10 130710162 130710186 -9606579 + (CA)n Simple_repeat Simple_repeat 2 25 0 243 152 0 0 chr10 130710210 130710256 -9606509 - LTR66 LTR ERVL -171 439 394 3583 152 9 3 chr10 130710271 130711286 -9605479 - L1PB4 LINE L1 -378 5778 4757 923 202 20 0 chr10 130711607 130711810 -9604955 + L1MC3 LINE L1 6860 7066 -719 2714 164 12 12 chr10 130711812 130712300 -9604465 + L1MC3 LINE L1 7142 7629 -156 205 294 24 12 chr10 130712309 130712394 -9604371 - MIR SINE MIR -1 261 176 431 301 91 65 chr10 130712523 130712895 -9603870 + MLT1J LTR MaLR 29 410 -101 318 333 9 0 chr10 130713126 130713240 -9603525 + MIR SINE MIR 29 143 -119 544 145 0 0 chr10 130713673 130713756 -9603009 + L1MC3 LINE L1 7445 7527 -258 221 356 46 46 chr10 130713983 130714112 -9602653 - L2 LINE L2 -1272 2042 1914 3193 196 46 6 chr10 130714112 130714740 -9602025 - MER82 DNA MER2_type 0 653 1 221 356 46 46 chr10 130714740 130714894 -9601871 - L2 LINE L2 -1399 1915 1759 381 176 55 22 chr10 130715211 130715302 -9601463 - MER53 DNA DNA -2 187 94 424 339 32 27 chr10 130715566 130715752 -9601013 + MIR3 SINE MIR 1 187 -21 238 342 53 0 chr10 130716386 130716500 -9600265 - MIR SINE MIR -115 147 28 489 254 61 22 chr10 130717627 130717808 -9598957 - MIR SINE MIR -35 227 40 28 0 0 0 chr10 130717969 130717997 -9598768 + AT_rich Low_complexity Low_complexity 1 28 0 204 330 129 27 chr10 130718679 130718903 -9597862 + L3 LINE CR1 1092 1338 -239 182 294 0 0 chr10 130718899 130718950 -9597815 + L3b LINE CR1 1530 1580 -3 * 2394 93 3 0 chr10 130719718 130720019 -9596746 + AluSp SINE Alu 1 302 -11 25 75 0 0 chr10 130720478 130720531 -9596234 + AT_rich Low_complexity Low_complexity 1 53 0 3454 218 83 8 chr10 130720563 130721406 -9595359 + L1ME1 LINE L1 5259 6164 -2 217 321 100 29 chr10 130721727 130721867 -9594898 - MIR SINE MIR -9 253 104 2305 107 0 25 chr10 130722267 130722584 -9594181 + AluSx SINE Alu 1 309 -3 3537 118 9 4 chr10 130722822 130723347 -9593418 - L1PA15 LINE L1 -8 6157 5630 2620 215 20 2 chr10 130723347 130723938 -9592827 + L1P LINE L1 2862 3463 -2683 2737 88 3 0 chr10 130723938 130724292 -9592473 - THE1A LTR MaLR 0 355 1 11767 89 8 2 chr10 130724300 130725847 -9590918 - THE1A-int LTR MaLR -24 1556 1 2821 74 3 0 chr10 130725847 130726197 -9590568 - THE1A LTR MaLR 0 355 5 1237 186 4 8 chr10 130726200 130726442 -9590323 + L1P LINE L1 3458 3698 -2448 542 219 24 89 chr10 130726709 130726878 -9589887 - MER113 DNA MER1_type? -91 430 273 929 104 0 15 chr10 130727031 130727166 -9589599 + AluSg/x SINE Alu 180 312 0 316 332 75 58 chr10 130727612 130727838 -9588927 - L1MC/D LINE L1 -2169 5639 5410 6254 23 0 1 chr10 130727842 130728550 -9588215 - L1PA3 LINE L1 -3 6152 5446 2019 37 0 8 chr10 130729009 130729255 -9587510 - L1PA5 LINE L1 -3 6151 5908 2306 96 3 0 chr10 130729948 130730241 -9586524 - AluSc SINE Alu -15 294 1 604 271 28 22 chr10 130731192 130731373 -9585392 + MIR SINE MIR 4 185 -77 359 300 20 0 chr10 130731498 130731598 -9585167 + MIR3 SINE MIR 96 197 -11 219 259 0 0 chr10 130731669 130731727 -9585038 + L2 LINE L2 3250 3307 -6 1132 239 61 15 chr10 130734274 130734600 -9582165 - MER58B DNA MER1_type 0 341 1 362 303 71 47 chr10 130734611 130734822 -9581943 + MIR SINE MIR 15 230 -32 233 281 0 0 chr10 130734869 130734926 -9581839 + MIR SINE MIR 65 121 -87 329 213 128 0 chr10 130735394 130735488 -9581277 + MER113 DNA MER1_type? 9 114 -407 * 351 39 19 19 chr10 130735485 130735537 -9581228 + MADE1 DNA Mariner 29 80 0 205 258 30 15 chr10 130736162 130736228 -9580537 + MIR SINE MIR 117 183 -79 327 327 23 36 chr10 130737994 130738165 -9578600 - MIR SINE MIR -89 173 5 242 331 30 54 chr10 130738414 130738580 -9578185 + MIR SINE MIR 69 230 -32 197 258 30 30 chr10 130738878 130738944 -9577821 - MIR SINE MIR -65 143 78 2084 133 0 24 chr10 130740598 130740892 -9575873 - AluSx SINE Alu -25 287 1 316 204 75 43 chr10 130741035 130741128 -9575637 + MIR3 SINE MIR 112 207 -1 202 240 20 0 chr10 130742744 130742794 -9573971 - MIR SINE MIR -13 249 199 938 211 14 31 chr10 130743071 130743294 -9573471 - MER20 DNA MER1_type 0 219 1 339 267 50 50 chr10 130743535 130743715 -9573050 + MIR3 SINE MIR 20 199 -9 2046 123 47 13 chr10 130747081 130747382 -9569383 + AluSx SINE Alu 1 311 -1 474 270 86 12 chr10 130749909 130750072 -9566693 + L2 LINE L2 3106 3280 -33 404 262 87 27 chr10 130750616 130750765 -9566000 - L2 LINE L2 -218 3054 2897 612 178 20 34 chr10 130752732 130752878 -9563887 + MER103 DNA DNA 22 165 -1 211 152 22 22 chr10 130753983 130754029 -9562736 + (CAA)n Simple_repeat Simple_repeat 3 48 0 333 330 74 39 chr10 130754076 130754279 -9562486 + MIR SINE MIR 20 229 -33 189 298 71 48 chr10 130754471 130754555 -9562210 - L2 LINE L2 -1 3271 3186 2169 124 13 0 chr10 130755472 130755778 -9560987 + AluSx SINE Alu 1 310 -2 398 286 0 8 chr10 130757250 130757369 -9559396 - MIR SINE MIR -14 248 131 498 240 60 0 chr10 130757369 130757519 -9559246 + L1ME3A LINE L1 6011 6169 -1 722 230 286 15 chr10 130757563 130757954 -9558811 + MLT1D LTR MaLR 8 504 -1 2841 186 70 20 chr10 130758385 130759265 -9557500 - L1ME2 LINE L1 -6 6160 5173 2111 144 13 0 chr10 130759265 130759570 -9557195 - AluSx SINE Alu -2 310 2 2841 186 70 20 chr10 130759570 130759809 -9556956 - L1ME2 LINE L1 -993 5173 4947 307 288 25 62 chr10 130759882 130760042 -9556723 - L2 LINE L2 -2 3311 3158 211 205 0 0 chr10 130760349 130760388 -9556377 + (TG)n Simple_repeat Simple_repeat 1 39 0 197 374 21 79 chr10 130760617 130760807 -9555958 - MIR SINE MIR -56 206 28 529 302 28 44 chr10 130761055 130761307 -9555458 + MIR SINE MIR 14 261 -1 288 292 33 57 chr10 130761553 130761731 -9555034 - MIR SINE MIR -50 212 39 493 301 45 40 chr10 130761799 130761998 -9554767 - MIR SINE MIR -6 256 57 28 0 0 0 chr10 130763761 130763789 -9552976 + AT_rich Low_complexity Low_complexity 1 28 0 712 149 9 0 chr10 130763793 130763907 -9552858 - FLAM_A SINE Alu -18 124 10 350 279 45 58 chr10 130764263 130764417 -9552348 - MLT2E LTR ERVL -443 185 34 303 267 106 44 chr10 130764760 130764940 -9551825 + L2 LINE L2 3118 3308 -5 294 284 11 32 chr10 130768411 130768506 -9548259 - MIR SINE MIR -67 141 49 240 262 93 17 chr10 130771054 130771172 -9545593 - MIR3 SINE MIR -43 165 45 210 191 0 0 chr10 130772329 130772371 -9544394 - MIR SINE MIR -70 138 97 205 325 114 0 chr10 130772510 130772548 -9544217 + MIR3 SINE MIR 4 36 -172 653 236 59 25 chr10 130772548 130772751 -9544014 - MER63A DNA MER1_type 0 210 1 205 325 114 0 chr10 130772751 130772835 -9543930 + MIR3 SINE MIR 36 140 -68 463 295 155 23 chr10 130772863 130773407 -9543358 - L2 LINE L2 -38 3275 2648 288 299 0 0 chr10 130774147 130774234 -9542531 - MIR SINE MIR -32 230 144 446 218 75 128 chr10 130774238 130774426 -9542339 - MER45A DNA AcHobo 0 178 1 405 250 11 11 chr10 130774426 130774518 -9542247 - MIR SINE MIR -116 146 55 540 244 98 108 chr10 130774537 130774955 -9541810 + MLT2D LTR ERVL 1 414 0 679 259 89 13 chr10 130775052 130775479 -9541286 + L2 LINE L2 2717 3182 -131 2293 176 36 50 chr10 130776629 130777105 -9539660 + MLT2B2 LTR ERVL 1 469 -46 854 165 0 12 chr10 130777105 130777269 -9539496 + Tigger2 DNA MER2_type 2 163 -2555 2016 155 0 16 chr10 130777269 130777578 -9539187 + AluJb SINE Alu 1 304 -8 2041 121 83 63 chr10 130777595 130778114 -9538651 - MLT2A2 LTR ERVL 0 554 1 913 197 6 27 chr10 130778125 130778308 -9538457 + Tigger2 DNA MER2_type 2538 2716 -2 234 152 22 0 chr10 130778312 130778358 -9538407 + MLT2B2 LTR ERVL 469 515 0 288 280 112 0 chr10 130778432 130778557 -9538208 - MIR SINE MIR -79 183 45 429 286 43 11 chr10 130778745 130778930 -9537835 - L1ME3 LINE L1 -216 5946 5756 306 256 88 22 chr10 130779472 130779609 -9537156 + L1ME3 LINE L1 5744 5889 -273 2417 93 3 0 chr10 130779612 130779913 -9536852 + AluSp SINE Alu 6 307 -6 466 204 37 0 chr10 130781373 130781481 -9535284 + MIR SINE MIR 31 142 -66 1171 223 92 45 chr10 130781809 130782254 -9534511 + MLT1C LTR MaLR 2 467 0 296 267 44 0 chr10 130782803 130782893 -9533872 + MER5A DNA MER1_type 13 106 -83 268 283 76 35 chr10 130782947 130783092 -9533673 + MER5A DNA MER1_type 4 154 -35 267 311 44 55 chr10 130784803 130784986 -9531779 + MIR SINE MIR 27 207 -55 227 170 43 21 chr10 130785207 130785301 -9531464 + (CAA)n Simple_repeat Simple_repeat 1 96 0 250 268 0 42 chr10 130786098 130786169 -9530596 - MIR SINE MIR -106 156 89 180 256 178 0 chr10 130786564 130786654 -9530111 - MER5A DNA MER1_type -80 109 4 504 282 5 58 chr10 130786657 130786845 -9529920 + MER5B DNA MER1_type 1 178 0 271 254 0 0 chr10 130787562 130787617 -9529148 + MLT1H1 LTR MaLR 71 125 -442 2426 219 37 3 chr10 130787617 130788189 -9528576 + L1MD3 LINE L1 7404 7994 -1 401 267 69 0 chr10 130788511 130788627 -9528138 + MIR SINE MIR 20 143 -65 658 236 161 70 chr10 130788802 130789188 -9527577 - MLT1J2 LTR MaLR -29 421 1 481 334 63 58 chr10 130789641 130790087 -9526678 - L2 LINE L2 0 3272 2825 264 122 0 0 chr10 130790708 130790749 -9526016 + (CA)n Simple_repeat Simple_repeat 2 42 0 357 195 234 0 chr10 130791050 130791127 -9525638 + MER58A DNA MER1_type 1 95 -12 1113 236 58 49 chr10 130791151 130791495 -9525270 + MLT1H1 LTR MaLR 206 552 -3 2066 186 90 0 chr10 130791889 130792277 -9524488 + MSTB LTR MaLR 3 425 -1 730 238 55 45 chr10 130792378 130792593 -9524172 - MLT1D LTR MaLR -320 185 1 231 204 148 93 chr10 130793009 130793117 -9523648 - MIR SINE MIR -70 192 79 249 182 0 0 chr10 130794089 130794144 -9522621 + (CA)n Simple_repeat Simple_repeat 2 56 0 448 231 126 0 chr10 130794539 130794682 -9522083 - MIR SINE MIR -12 250 90 255 283 0 0 chr10 130794846 130794945 -9521820 + (TG)n Simple_repeat Simple_repeat 1 99 0 303 267 0 0 chr10 130795644 130795719 -9521046 + MIR SINE MIR 61 135 -73 860 282 10 10 chr10 130796281 130796490 -9520275 - MIR SINE MIR -31 231 23 232 108 0 0 chr10 130797821 130797858 -9518907 + L2 LINE L2 3022 3058 -214 274 233 86 3 chr10 130798846 130798964 -9517801 - MIR SINE MIR -75 133 1 2266 106 3 0 chr10 130799792 130800103 -9516662 + AluSp SINE Alu 1 312 -1 378 42 0 0 chr10 130800700 130800748 -9516017 + (CA)n Simple_repeat Simple_repeat 2 49 0 675 320 74 27 chr10 130800793 130801102 -9515663 - L1MC4a LINE L1 -1898 5910 5570 192 40 0 0 chr10 130801102 130801127 -9515638 + (TA)n Simple_repeat Simple_repeat 2 26 0 675 320 74 27 chr10 130801127 130801292 -9515473 - L1MC4a LINE L1 -2238 5570 5414 239 364 16 8 chr10 130801589 130801710 -9515055 + MER91A DNA MER1_type 21 142 -54 203 299 91 0 chr10 130801716 130801793 -9514972 + MER91A DNA MER1_type 112 195 -1 4058 241 43 30 chr10 130802384 130802479 -9514286 - L1MEc LINE L1 -5126 1270 1178 2279 88 0 0 chr10 130802479 130802774 -9513991 + AluSc SINE Alu 1 295 -14 4058 241 43 30 chr10 130802774 130803898 -9512867 - L1MEc LINE L1 -5218 1178 35 1094 213 46 6 chr10 130803896 130804220 -9512545 + L1ME1 LINE L1 2792 3128 -3018 * 1335 219 0 17 chr10 130804235 130804468 -9512297 - MER8 DNA MER2_type -10 229 1 442 113 0 41 chr10 130804474 130804571 -9512194 + L1ME1 LINE L1 3139 3231 -2915 2703 253 41 17 chr10 130804573 130805335 -9511430 + L1ME1 LINE L1 3463 4250 -1896 1570 166 152 23 chr10 130805335 130805684 -9511081 - MSTD LTR MaLR -2 394 1 2703 253 41 17 chr10 130805684 130805807 -9510958 + L1ME1 LINE L1 4250 4369 -1777 561 171 144 12 chr10 130805807 130805934 -9510831 - MSTD LTR MaLR -259 137 1 1524 234 53 50 chr10 130805945 130806884 -9509881 + L1ME1 LINE L1 4409 5272 -874 1895 92 0 0 chr10 130806890 130807141 -9509624 - AluSq SINE Alu -8 305 55 2934 210 54 37 chr10 130807338 130807522 -9509243 + L1ME1 LINE L1 5393 5572 -594 2314 77 3 10 chr10 130807522 130807832 -9508933 + AluY SINE Alu 1 308 -3 2934 210 54 37 chr10 130807832 130808403 -9508362 + L1ME1 LINE L1 5572 6161 -5 684 211 67 10 chr10 130808623 130808831 -9507934 - MER106A DNA MER1_type -12 224 5 239 276 0 17 chr10 130809516 130809574 -9507191 + MLT1K LTR MaLR 186 242 -346 1135 165 39 30 chr10 130811576 130811806 -9504959 - MLT1E3 LTR MaLR -1 623 392 2093 107 0 3 chr10 130812031 130812322 -9504443 - AluSq SINE Alu -23 290 1 526 148 30 22 chr10 130812423 130812558 -9504207 + CT-rich Low_complexity Low_complexity 3 138 0 221 364 29 21 chr10 130812558 130812698 -9504067 - MIR3 SINE MIR -67 141 1 10155 170 80 43 chr10 130813277 130813863 -9502902 - L1MC3 LINE L1 -11 7774 7211 234 284 15 0 chr10 130813863 130813930 -9502835 - MLT1F1 LTR MaLR -465 102 35 10155 170 80 43 chr10 130813930 130815295 -9501470 - L1MC3 LINE L1 -574 7211 5661 1981 142 0 0 chr10 130815295 130815598 -9501167 + AluSx SINE Alu 1 303 -9 10155 170 80 43 chr10 130815598 130815857 -9500908 - L1MC3 LINE L1 -2124 5661 5413 183 293 37 37 chr10 130816082 130816164 -9500601 - L2 LINE L2 -1 3271 3190 563 199 244 0 chr10 130816342 130816473 -9500292 + MER5A DNA MER1_type 13 175 -14 214 229 36 12 chr10 130817471 130817554 -9499211 + (TCTA)n Simple_repeat Simple_repeat 4 88 0 187 309 18 0 chr10 130817830 130817885 -9498880 + MIR3 SINE MIR 116 171 -37 1170 117 22 17 chr10 130817893 130818072 -9498693 + MSTC LTR MaLR 1 180 -248 2241 90 3 3 chr10 130818100 130818399 -9498366 + AluSx SINE Alu 1 299 -13 1561 218 81 49 chr10 130818401 130818958 -9497807 + LTR24B LTR ERV1 7 635 0 1468 158 26 30 chr10 130818958 130819220 -9497545 + MSTC LTR MaLR 164 424 -4 184 312 58 71 chr10 130819228 130819382 -9497383 - MER5B DNA MER1_type -26 152 1 2193 76 3 14 chr10 130819769 130820058 -9496707 - AluY SINE Alu -23 288 3 295 333 0 0 chr10 130820059 130820140 -9496625 + CT-rich Low_complexity Low_complexity 4 84 0 265 321 113 40 chr10 130821364 130821638 -9495127 - L2 LINE L2 -534 2780 2487 337 91 0 0 chr10 130821829 130821873 -9494892 - MER41B LTR ERV1 0 635 592 1998 233 116 13 chr10 130822000 130822536 -9494229 - L1ME1 LINE L1 -9 6157 5567 516 286 77 47 chr10 130822521 130822959 -9493806 - L1MCb LINE L1 -5772 650 265 * 239 0 32 0 chr10 130822984 130823015 -9493750 + (TTG)n Simple_repeat Simple_repeat 2 33 0 240 305 62 31 chr10 130823207 130823335 -9493430 - L2 LINE L2 -1 3312 3181 2003 196 36 34 chr10 130823671 130824170 -9492595 + MLT1D LTR MaLR 2 501 -4 243 0 0 0 chr10 130824244 130824271 -9492494 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 716 234 96 10 chr10 130824289 130824486 -9492279 + MIR SINE MIR 36 249 -13 182 229 14 0 chr10 130824487 130824557 -9492208 + (CAT)n Simple_repeat Simple_repeat 2 72 0 350 220 10 0 chr10 130824579 130824679 -9492086 + (CACCAT)n Simple_repeat Simple_repeat 4 104 0 462 242 0 0 chr10 130824868 130824959 -9491806 - MER81 DNA DNA -22 92 2 376 330 98 0 chr10 130824995 130825167 -9491598 - L3 LINE CR1 -9 1568 1380 200 357 30 20 chr10 130825167 130825266 -9491499 + MIR SINE MIR 3 101 -107 765 150 67 33 chr10 130825612 130825792 -9490973 + L1MB7 LINE L1 5999 6184 0 508 196 0 0 chr10 130827693 130827785 -9488980 + FRAM SINE Alu 68 159 -17 211 310 169 7 chr10 130827915 130828057 -9488708 - MIR SINE MIR -18 244 80 548 97 0 105 chr10 130829185 130829256 -9487509 + L1MB3 LINE L1 6080 6136 -47 1410 181 211 7 chr10 130829256 130829490 -9487275 + MLT1A1 LTR MaLR 1 312 -53 1905 131 0 39 chr10 130829490 130829795 -9486970 - AluSq SINE Alu -20 293 1 1410 181 211 7 chr10 130829795 130829863 -9486902 + MLT1A1 LTR MaLR 312 365 0 548 97 0 105 chr10 130829863 130829905 -9486860 + L1MB3 LINE L1 6136 6181 -2 516 292 95 80 chr10 130829948 130830411 -9486354 - MLT1H LTR MaLR -4 545 76 2122 114 3 7 chr10 130830442 130830748 -9486017 - AluSq SINE Alu -8 305 1 320 296 113 52 chr10 130831759 130831989 -9484776 + L2 LINE L2 3070 3313 0 188 279 58 35 chr10 130832037 130832123 -9484642 + MIR3 SINE MIR 5 92 -116 300 259 148 15 chr10 130832157 130832292 -9484473 - LTR67 LTR ERVL -54 503 351 268 259 12 12 chr10 130833595 130833680 -9483085 - MIR SINE MIR -147 115 31 29 28 0 0 chr10 130833742 130833778 -9482987 + AT_rich Low_complexity Low_complexity 1 36 0 4934 123 66 6 chr10 130833778 130834612 -9482153 - L1PA16 LINE L1 -7 6159 5276 11140 213 28 9 chr10 130834680 130837292 -9479473 + L1 LINE L1 2632 5294 -852 683 323 145 29 chr10 130837746 130838199 -9478566 - L2 LINE L2 0 3272 2873 2055 120 0 7 chr10 130838199 130838500 -9478265 + AluSg SINE Alu 1 299 -11 683 323 145 29 chr10 130838500 130839304 -9477461 - L2 LINE L2 -399 2873 1873 1289 144 65 0 chr10 130839485 130839700 -9477065 + MER2 DNA MER2_type 1 229 -116 1799 186 90 0 chr10 130840383 130840716 -9476049 - MLT1A1 LTR MaLR -2 363 1 245 200 56 33 chr10 130840890 130840980 -9475785 - MIR3 SINE MIR -27 181 90 503 216 213 84 chr10 130841034 130841377 -9475388 + MLT1J LTR MaLR 109 495 -16 589 286 96 50 chr10 130842106 130842483 -9474282 + L1ME LINE L1 5360 5753 -368 44 56 0 0 chr10 130842522 130842594 -9474171 + AT_rich Low_complexity Low_complexity 1 72 0 1662 253 19 45 chr10 130842655 130843251 -9473514 - L1ME1 LINE L1 -6 6229 5650 1393 65 60 0 chr10 130843257 130843441 -9473324 - MER30 DNA MER1_type -35 195 1 6952 221 45 25 chr10 130843441 130845215 -9471550 - L1ME1 LINE L1 -571 5664 3829 243 103 0 0 chr10 130845215 130845254 -9471511 + (CA)n Simple_repeat Simple_repeat 2 40 0 6952 221 45 25 chr10 130845254 130845677 -9471088 - L1ME1 LINE L1 -2406 3829 3416 2027 142 3 0 chr10 130846470 130846772 -9469993 + AluSg SINE Alu 1 303 -7 291 62 138 138 chr10 130847639 130847719 -9469046 + MADE1 DNA Mariner 1 80 0 200 100 25 0 chr10 130847837 130847877 -9468888 + L2 LINE L2 3273 3313 0 294 296 0 0 chr10 130848699 130848787 -9467978 + (CAT)n Simple_repeat Simple_repeat 3 90 0 1308 191 62 81 chr10 130848959 130849330 -9467435 - MLT1A1 LTR MaLR -1 364 1 203 335 60 39 chr10 130849404 130849586 -9467179 - L2 LINE L2 -222 3050 2865 2187 247 25 17 chr10 130850247 130850835 -9465930 - L1M4 LINE L1 -1786 4360 3768 315 0 0 0 chr10 130850835 130850870 -9465895 + (TA)n Simple_repeat Simple_repeat 1 35 0 225 108 0 0 chr10 130850869 130850906 -9465859 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 1398 256 19 16 chr10 130850909 130851339 -9465426 - L1M4 LINE L1 -2373 3773 3343 491 255 47 0 chr10 130851330 130851479 -9465286 - L1ME1 LINE L1 -4277 2119 1964 * 387 303 22 22 chr10 130851482 130851713 -9465052 + L1MEc LINE L1 1265 1495 -4901 780 251 24 10 chr10 130851723 130851930 -9464835 - L1ME1 LINE L1 -4449 1947 1738 244 318 0 0 chr10 130854383 130854471 -9462294 + (ATG)n Simple_repeat Simple_repeat 3 90 0 634 234 132 76 chr10 130855735 130856145 -9460620 - L1MC5 LINE L1 -304 7657 7225 296 128 0 0 chr10 130856627 130856674 -9460091 - MLT1B LTR MaLR -4 386 340 283 211 44 22 chr10 130857074 130857164 -9459601 + MIR SINE MIR 53 144 -118 3044 225 45 29 chr10 130857211 130858172 -9458593 - L1ME2 LINE L1 -9 6155 5175 568 101 22 0 chr10 130858215 130858304 -9458461 + (TTTC)n Simple_repeat Simple_repeat 1 91 0 2039 130 0 11 chr10 130858304 130858588 -9458177 - AluSq SINE Alu -32 281 1 1644 215 61 49 chr10 130858591 130859145 -9457620 - L1ME2 LINE L1 -944 5202 4642 1650 277 58 7 chr10 130859153 130859838 -9456927 - L1ME2 LINE L1 -2587 3559 2840 763 311 66 31 chr10 130859835 130860083 -9456682 + L1MEc LINE L1 1147 1385 -5011 * 378 0 0 0 chr10 130860083 130860125 -9456640 + (CA)n Simple_repeat Simple_repeat 2 43 0 763 311 66 31 chr10 130860125 130860486 -9456279 + L1MEc LINE L1 1385 1777 -4619 2374 108 0 0 chr10 130860567 130860873 -9455892 - AluSq SINE Alu -7 306 1 38 51 0 0 chr10 130861777 130861836 -9454929 + AT_rich Low_complexity Low_complexity 1 59 0 541 242 39 43 chr10 130862279 130862535 -9454230 + L1MEc LINE L1 2317 2571 -3644 4285 64 2 0 chr10 130862793 130863328 -9453437 - L1PA12 LINE L1 -15 6153 5618 3104 145 12 0 chr10 130863335 130863833 -9452932 + L1P LINE L1 3960 4463 -1683 265 320 78 8 chr10 130863830 130863958 -9452807 + L1ME4a LINE L1 5741 5877 -285 * 414 247 0 0 chr10 130865951 130866040 -9450725 - MIR SINE MIR -112 150 62 256 224 0 0 chr10 130866403 130866452 -9450313 + L2 LINE L2 3200 3248 -24 236 100 25 0 chr10 130866621 130866661 -9450104 + (GAA)n Simple_repeat Simple_repeat 2 42 0 193 326 114 11 chr10 130868953 130869128 -9447637 + L2 LINE L2 2897 3089 -183 209 333 42 10 chr10 130869215 130869311 -9447454 + L2 LINE L2 3200 3298 -15 353 271 56 14 chr10 130871205 130871349 -9445416 + MIR SINE MIR 56 205 -57 26 0 0 0 chr10 130871977 130872003 -9444762 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr10 130872073 130872094 -9444671 + AT_rich Low_complexity Low_complexity 1 21 0 2748 182 25 14 chr10 130872255 130872896 -9443869 + L1MB7 LINE L1 5208 5858 -326 209 243 171 0 chr10 130874069 130874139 -9442626 + MIR SINE MIR 73 154 -108 284 267 78 17 chr10 130875032 130875148 -9441617 - MIR SINE MIR -63 145 23 2327 90 0 0 chr10 130875300 130875590 -9441175 + AluY SINE Alu 1 290 -21 1911 159 31 0 chr10 130877621 130878055 -9438710 + AluSq SINE Alu 1 443 0 263 257 28 83 chr10 130878173 130878282 -9438483 + L1MC4 LINE L1 7646 7748 -294 352 211 269 11 chr10 130878326 130878501 -9438264 + L1ME4a LINE L1 5877 6096 -25 440 324 126 11 chr10 130878710 130879074 -9437691 + L1ME LINE L1 5385 5790 -331 209 274 36 12 chr10 130879806 130879890 -9436875 + MIR SINE MIR 58 143 -119 298 225 0 25 chr10 130879890 130879970 -9436795 - MLT1D LTR MaLR 0 467 390 354 295 62 40 chr10 130880038 130880262 -9436503 + MLT1K LTR MaLR 356 584 -4 369 0 0 0 chr10 130880462 130880503 -9436262 + (TG)n Simple_repeat Simple_repeat 1 41 0 2331 105 0 6 chr10 130882001 130882316 -9434449 + AluSq SINE Alu 1 313 0 833 159 0 29 chr10 130883047 130883185 -9433580 - AluJb SINE Alu -178 134 1 238 300 67 33 chr10 130883290 130883440 -9433325 + MIR3 SINE MIR 20 174 -34 224 222 247 0 chr10 130883964 130884045 -9432720 + MIR SINE MIR 54 154 -108 1552 179 41 0 chr10 130884290 130884558 -9432207 + AluJb SINE Alu 1 279 -33 675 0 0 0 chr10 130884561 130884636 -9432129 + (GGAAA)n Simple_repeat Simple_repeat 4 78 0 222 231 0 39 chr10 130884636 130884688 -9432077 + G-rich Low_complexity Low_complexity 4 53 0 1229 139 16 53 chr10 130884826 130885071 -9431694 + THE1B LTR MaLR 129 364 0 1092 215 95 80 chr10 130885075 130885465 -9431300 - MLT1D LTR MaLR -109 396 1 316 200 31 0 chr10 130885816 130885881 -9430884 + MIR SINE MIR 85 151 -111 275 261 7 29 chr10 130888667 130888805 -9427960 + (CA)n Simple_repeat Simple_repeat 1 135 0 278 311 0 16 chr10 130888872 130889055 -9427710 + (CA)n Simple_repeat Simple_repeat 1 180 0 214 158 0 0 chr10 130889177 130889215 -9427550 + (CA)n Simple_repeat Simple_repeat 1 38 0 198 71 0 0 chr10 130889236 130889264 -9427501 + (CA)n Simple_repeat Simple_repeat 1 28 0 366 312 118 34 chr10 130889722 130889959 -9426806 - L2 LINE L2 -38 3234 2978 216 67 0 0 chr10 130890220 130890250 -9426515 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 206 273 0 0 chr10 130890451 130890495 -9426270 + MIR SINE MIR 19 62 -146 2215 110 72 20 chr10 130890961 130891307 -9425458 + THE1B LTR MaLR 1 364 0 240 310 11 11 chr10 130892732 130892819 -9423946 + MIR SINE MIR 30 116 -92 212 0 36 0 chr10 130893173 130893201 -9423564 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 531 96 0 0 chr10 130893518 130893601 -9423164 + (TG)n Simple_repeat Simple_repeat 1 83 0 937 189 40 0 chr10 130894246 130894447 -9422318 - MER63B DNA MER1_type 0 435 227 795 226 75 19 chr10 130894449 130894661 -9422104 - MER58A DNA MER1_type 0 224 1 * 1097 161 106 5 chr10 130894661 130894871 -9421894 - MER63B DNA MER1_type -204 232 1 289 296 67 73 chr10 130894873 130895052 -9421713 + MIR SINE MIR 49 226 -36 972 223 43 39 chr10 130895573 130895964 -9420801 + MER74B LTR ERVL 59 490 -132 754 333 77 36 chr10 130896019 130896485 -9420280 + L2 LINE L2 2818 3302 -11 428 288 41 127 chr10 130896932 130897325 -9419440 + L2 LINE L2 2914 3272 0 262 169 31 0 chr10 130898098 130898163 -9418602 + GA-rich Low_complexity Low_complexity 4 70 0 708 269 67 14 chr10 130899023 130899231 -9417534 + MIR SINE MIR 38 256 -6 510 319 31 0 chr10 130899252 130899415 -9417350 - MIR SINE MIR -80 182 15 450 219 29 9 chr10 130899592 130899697 -9417068 + MER94 DNA DNA 2 108 -26 1296 293 61 41 chr10 130899845 130900967 -9415798 - L1MEd LINE L1 -4564 1746 561 3943 175 55 19 chr10 130902093 130903197 -9413568 + L1MB7 LINE L1 5031 6179 -5 894 167 46 6 chr10 130903277 130903451 -9413314 + MER53 DNA DNA 1 181 -8 294 284 15 52 chr10 130903576 130903710 -9413055 - MIR3 SINE MIR -65 143 15 487 308 6 71 chr10 130904514 130904696 -9412069 - MER5A DNA MER1_type -1 188 19 191 273 55 0 chr10 130905134 130905189 -9411576 + MIR3 SINE MIR 136 193 -15 228 135 0 0 chr10 130906914 130906951 -9409814 + (GA)n Simple_repeat Simple_repeat 2 38 0 239 160 85 128 chr10 130907344 130907438 -9409327 - MIR SINE MIR -49 213 124 2217 116 134 11 chr10 130907658 130908039 -9408726 + MSTA LTR MaLR 1 428 0 476 280 8 0 chr10 130908052 130908170 -9408595 - MIR SINE MIR -37 225 107 1605 237 42 24 chr10 130908199 130908651 -9408114 - MLT1C LTR MaLR 0 467 8 626 306 80 22 chr10 130908664 130908939 -9407826 + MLT1J2 LTR MaLR 30 320 -130 239 225 113 0 chr10 130908965 130909036 -9407729 + MLT1J2 LTR MaLR 372 450 0 191 421 13 0 chr10 130909038 130909114 -9407651 - MIR SINE MIR -175 87 11 26 0 0 0 chr10 130910333 130910359 -9406406 + AT_rich Low_complexity Low_complexity 1 26 0 1641 201 108 13 chr10 130910446 130910918 -9405847 - L1ME2 LINE L1 -2 6162 5646 453 197 76 0 chr10 130911655 130911787 -9404978 - L1ME4a LINE L1 -4 6117 5976 852 276 28 22 chr10 130911790 130912148 -9404617 - L1ME4a LINE L1 -181 5940 5581 1799 134 3 33 chr10 130912157 130912464 -9404301 - AluSx SINE Alu -10 302 5 413 283 71 9 chr10 130913007 130913120 -9403645 + L2 LINE L2 3153 3272 0 2139 101 13 0 chr10 130913542 130913850 -9402915 - AluSx SINE Alu 0 312 1 722 259 110 19 chr10 130914405 130914717 -9402048 - MLT1I LTR MaLR 0 409 67 319 335 114 0 chr10 130914845 130915021 -9401744 + L2 LINE L2 3075 3270 -2 372 309 73 31 chr10 130915448 130915639 -9401126 + MIR SINE MIR 7 205 -57 803 164 0 22 chr10 130916631 130916765 -9400000 - FLAM_C SINE Alu 0 133 3 235 244 0 0 chr10 130916882 130916923 -9399842 + MER58 DNA MER1_type 2 42 -173 477 125 159 0 chr10 130916936 130917024 -9399741 + MER58 DNA MER1_type 2319 2420 0 320 293 92 21 chr10 130917191 130917430 -9399335 + LTR16A1 LTR ERVL 202 457 0 731 292 73 0 chr10 130917832 130918051 -9398714 - MIR SINE MIR 0 262 28 2110 211 114 47 chr10 130919396 130919986 -9396779 + L1MA8 LINE L1 5479 6117 -174 1920 107 13 40 chr10 130919986 130920285 -9396480 + AluSx SINE Alu 1 291 -21 2110 211 114 47 chr10 130920285 130920335 -9396430 + L1MA8 LINE L1 6117 6162 -129 180 352 22 55 chr10 130920525 130920546 -9396219 - L3 LINE CR1 -1479 98 78 2534 164 39 4 chr10 130920546 130921014 -9395751 - L1MB5 LINE L1 -14 6160 5677 180 352 22 55 chr10 130921014 130921083 -9395682 - L3 LINE CR1 -1499 78 11 225 0 0 0 chr10 130922195 130922220 -9394545 + (A)n Simple_repeat Simple_repeat 1 25 0 324 0 0 0 chr10 130924871 130924907 -9391858 + (TG)n Simple_repeat Simple_repeat 2 37 0 386 322 103 23 chr10 130926652 130926826 -9389939 - L3 LINE CR1 -2 1575 1388 946 262 31 4 chr10 130926840 130927065 -9389700 + MIR SINE MIR 2 232 -30 198 325 62 0 chr10 130927321 130927401 -9389364 - L2 LINE L2 -35 3278 3194 2176 112 0 0 chr10 130927525 130927828 -9388937 + AluSg SINE Alu 1 303 -7 347 25 138 138 chr10 130928695 130928775 -9387990 + MADE1 DNA Mariner 1 80 0 218 100 25 0 chr10 130928893 130928933 -9387832 + L2 LINE L2 3273 3313 0 243 214 129 0 chr10 130929008 130929078 -9387687 - MIR SINE MIR 0 262 184 321 299 72 30 chr10 130931049 130931216 -9385549 - MIR3 SINE MIR -19 189 16 1229 233 31 13 chr10 130931453 130931770 -9384995 + MLT1A1 LTR MaLR 2 324 -41 214 205 0 0 chr10 130932397 130932436 -9384329 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 352 300 77 77 chr10 130932437 130932724 -9384041 - L1ME4a LINE L1 -88 6033 5747 547 185 108 117 chr10 130933279 130933789 -9382976 - MLT1G1 LTR MaLR 0 555 1 351 208 123 23 chr10 130933795 130933925 -9382840 - MLT1G1-int LTR MaLR -6 1365 1223 2078 111 0 26 chr10 130934094 130934400 -9382365 + AluSg SINE Alu 1 298 -12 305 296 62 0 chr10 130934494 130934575 -9382190 + L2 LINE L2 1872 1957 -1357 408 316 15 8 chr10 130934837 130934970 -9381795 - MIR3 SINE MIR -14 194 61 220 352 48 16 chr10 130935024 130935149 -9381616 - L2 LINE L2 -5 3267 3139 516 280 8 0 chr10 130937929 130938054 -9378711 - L2 LINE L2 0 3272 3147 2282 101 0 0 chr10 130939048 130939345 -9377420 + AluSg SINE Alu 1 297 -13 470 302 90 32 chr10 130939345 130939534 -9377231 + MIR SINE MIR 28 227 -35 370 291 7 7 chr10 130940151 130940302 -9376463 + GA-rich Low_complexity Low_complexity 2 152 0 327 141 12 47 chr10 130940316 130940401 -9376364 + GA-rich Low_complexity Low_complexity 1 82 0 241 238 42 126 chr10 130940450 130940593 -9376172 - MIR SINE MIR -19 243 113 220 205 0 0 chr10 130941251 130941290 -9375475 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr10 130941746 130941766 -9374999 + (TG)n Simple_repeat Simple_repeat 2 21 0 429 237 18 9 chr10 130942545 130942659 -9374106 + MER117 DNA MER1_type 50 164 -33 183 333 48 0 chr10 130942689 130942752 -9374013 - L2 LINE L2 -1 3271 3206 404 157 0 36 chr10 130943184 130943267 -9373498 - MER53 DNA DNA -4 185 106 531 311 17 22 chr10 130943442 130943622 -9373143 + MIR SINE MIR 2 180 -82 258 246 56 71 chr10 130943723 130943849 -9372916 + MIR3 SINE MIR 33 156 -52 252 0 0 0 chr10 130943861 130943889 -9372876 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2197 118 3 0 chr10 130943889 130944178 -9372587 - AluSx SINE Alu -22 290 1 2229 107 0 24 chr10 130944184 130944482 -9372283 - AluSx SINE Alu -21 291 1 2159 124 7 3 chr10 130944566 130944872 -9371893 + AluSx SINE Alu 1 307 -5 424 268 89 48 chr10 130946113 130946281 -9370484 - L2 LINE L2 -3 3269 3095 448 262 73 26 chr10 130947977 130948168 -9368597 + MLT1J2 LTR MaLR 5 204 -246 321 253 0 0 chr10 130948238 130948317 -9368448 + MLT1J2 LTR MaLR 361 439 -11 276 372 29 34 chr10 130949067 130949274 -9367491 + L2 LINE L2 2856 3061 -211 581 332 55 5 chr10 130950140 130950342 -9366423 - MIR SINE MIR -2 260 49 2026 171 13 91 chr10 130950555 130951004 -9365761 - MLT2D LTR ERVL 0 414 1 260 308 154 34 chr10 130951057 130951291 -9365474 + MIR SINE MIR 1 262 0 500 301 156 0 chr10 130951615 130951801 -9364964 - MIR SINE MIR -46 216 2 222 229 0 43 chr10 130951908 130951978 -9364787 + MIR SINE MIR 81 147 -115 338 277 46 31 chr10 130952690 130952820 -9363945 - MIR SINE MIR -116 146 15 230 270 16 0 chr10 130953945 130954008 -9362757 - L2 LINE L2 0 3313 3250 455 212 5 38 chr10 130954059 130954243 -9362522 + CT-rich Low_complexity Low_complexity 1 178 0 236 286 33 11 chr10 130954802 130954893 -9361872 + L2 LINE L2 3197 3289 -24 2226 110 9 38 chr10 130956825 130957144 -9359621 - AluSg SINE Alu 0 310 1 237 280 88 24 chr10 130958683 130958808 -9357957 + L3 LINE CR1 1403 1535 -42 432 196 54 113 chr10 130959075 130959243 -9357522 - MIR3 SINE MIR -46 162 5 183 250 0 0 chr10 130959229 130959265 -9357500 + L2 LINE L2 3217 3252 -20 * 492 310 14 0 chr10 130959528 130959670 -9357095 + MIR SINE MIR 98 241 -21 612 323 61 43 chr10 130959928 130960602 -9356163 + L2 LINE L2 2582 3265 -7 769 314 39 24 chr10 130960919 130961256 -9355509 + LTR16C LTR ERVL 150 491 0 1331 178 22 142 chr10 130961314 130961729 -9355036 + MLT1A1 LTR MaLR 1 365 0 297 196 76 68 chr10 130961851 130961958 -9354807 - MIR SINE MIR -64 144 56 217 283 195 0 chr10 130962170 130962283 -9354482 - MIR SINE MIR -1 261 127 * 225 343 29 0 chr10 130962282 130962352 -9354413 + L2 LINE L2 3240 3311 -2 * 226 235 39 0 chr10 130962349 130962400 -9354365 - MIR SINE MIR -140 122 70 283 339 74 54 chr10 130963277 130963519 -9353246 - L2 LINE L2 -56 3216 2970 5580 53 22 18 chr10 130963622 130964158 -9352607 - L1PA7 LINE L1 0 6154 5613 2455 68 0 0 chr10 130964158 130964451 -9352314 - AluY SINE Alu -18 293 1 5580 53 22 18 chr10 130964451 130964632 -9352133 - L1PA7 LINE L1 -541 5613 5434 719 309 50 41 chr10 130965260 130965285 -9351480 - L2 LINE L2 -629 2685 2662 2395 82 7 13 chr10 130965285 130965590 -9351175 + AluSc SINE Alu 1 303 -6 719 309 50 41 chr10 130965590 130966001 -9350764 - L2 LINE L2 -652 2662 2245 623 158 18 18 chr10 130967098 130967269 -9349496 + (TCCA)n Simple_repeat Simple_repeat 3 173 0 1179 247 72 31 chr10 130967311 130967764 -9349001 - MER110A LTR ERV1 0 468 40 215 259 93 56 chr10 130969072 130969180 -9347585 + MIR3 SINE MIR 13 124 -84 678 167 30 0 chr10 130969630 130969762 -9347003 + MER5A DNA MER1_type 1 136 -53 218 261 76 59 chr10 130969915 130970034 -9346731 - MIR3 SINE MIR -7 201 81 1764 212 69 8 chr10 130970901 130971336 -9345429 - L1MB5 LINE L1 0 6174 5716 257 273 173 9 chr10 130971345 130971455 -9345310 - MIR3 SINE MIR -66 142 15 610 265 7 8 chr10 130971649 130971801 -9344964 - L1ME1 LINE L1 0 6334 6183 2493 152 36 10 chr10 130971801 130972216 -9344549 + MSTB LTR MaLR 1 426 0 610 265 7 8 chr10 130972216 130972231 -9344534 - L1ME1 LINE L1 -151 6183 6012 665 245 87 0 chr10 130972245 130972485 -9344280 - L1ME1 LINE L1 -282 5884 5603 293 212 76 0 chr10 130974236 130974302 -9342463 + MIR3 SINE MIR 102 172 -36 573 200 76 48 chr10 130974304 130974449 -9342316 - L2 LINE L2 -1 3271 3123 378 252 202 0 chr10 130975099 130975218 -9341547 + MIR3 SINE MIR 16 158 -50 189 355 16 0 chr10 130976218 130976280 -9340485 - L2 LINE L2 -20 3293 3231 233 191 21 21 chr10 130978027 130978074 -9338691 + MIR SINE MIR 20 66 -196 222 257 14 68 chr10 130979179 130979253 -9337512 - L3b LINE CR1 -115 1468 1399 309 89 0 0 chr10 130979617 130979662 -9337103 + (TATG)n Simple_repeat Simple_repeat 3 47 0 204 311 66 49 chr10 130980006 130980128 -9336637 + L2 LINE L2 3143 3266 -6 211 324 40 0 chr10 130980736 130980810 -9335955 + MIR SINE MIR 90 166 -96 644 281 18 54 chr10 130981624 130981845 -9334920 + MIR SINE MIR 21 233 -29 1868 172 3 10 chr10 130982516 130982824 -9333941 + AluJo SINE Alu 1 306 -6 339 296 85 22 chr10 130983639 130983783 -9332982 + MIR SINE MIR 14 156 -63 242 283 0 0 chr10 130983846 130983899 -9332866 + polypyrimidine Low_complexity Low_complexity 3 55 0 405 244 87 71 chr10 130984216 130984384 -9332381 + MLT1L LTR MaLR 131 306 -309 1246 178 48 122 chr10 130984384 130984778 -9331987 + MLT1A1 LTR MaLR 1 365 0 405 244 87 71 chr10 130984778 130984875 -9331890 + MLT1L LTR MaLR 306 400 -215 1953 191 18 10 chr10 130984926 130985325 -9331440 - L1MB7 LINE L1 -1 6183 5782 225 182 0 0 chr10 130985330 130985374 -9331391 + LTR66 LTR ERVL 394 437 -173 812 176 0 7 chr10 130985391 130985544 -9331221 - L1MB7 LINE L1 -391 5793 5642 686 254 21 93 chr10 130985577 130985856 -9330909 + MIR SINE MIR 4 262 0 563 313 69 9 chr10 130986786 130987019 -9329746 + MIR SINE MIR 9 255 -7 1898 154 37 13 chr10 130988730 130989029 -9327736 + AluJo SINE Alu 1 306 -6 2241 87 35 0 chr10 130989399 130989687 -9327078 - AluY SINE Alu -13 298 1 182 231 192 0 chr10 130989872 130989924 -9326841 - L2 LINE L2 -6 3307 3246 196 324 42 14 chr10 130990767 130990838 -9325927 + L2 LINE L2 3191 3263 -50 1050 212 5 0 chr10 130992061 130992264 -9324501 - MER58A DNA MER1_type -15 209 6 238 287 140 35 chr10 130993382 130993525 -9323240 + MIR3 SINE MIR 15 172 -36 487 139 60 174 chr10 130993528 130993729 -9323036 + MER53 DNA DNA 1 178 -11 269 231 0 0 chr10 130993935 130993987 -9322778 + L2 LINE L2 3262 3313 0 622 280 99 0 chr10 130994146 130994328 -9322437 + MIR SINE MIR 2 201 -61 2373 122 28 17 chr10 130994986 130995346 -9321419 + THE1B LTR MaLR 1 364 0 232 241 38 25 chr10 130997080 130997159 -9319606 - MER5A DNA MER1_type -32 157 78 329 346 133 27 chr10 130997227 130997888 -9318877 + L2 LINE L2 2233 2963 -351 302 195 0 61 chr10 130998130 130998212 -9318553 + MER116 DNA Mariner 4 80 0 248 296 37 37 chr10 130999041 130999149 -9317616 - MIR3 SINE MIR -53 155 48 438 107 0 0 chr10 130999318 130999374 -9317391 + Alu SINE Alu 2 57 -256 1678 94 0 9 chr10 130999401 130999624 -9317141 - AluSc SINE Alu -23 286 66 2114 121 0 3 chr10 130999665 130999947 -9316818 - AluSx SINE Alu -31 281 1 219 167 0 0 chr10 130999996 131000038 -9316727 + (TAA)n Simple_repeat Simple_repeat 2 43 0 199 310 62 99 chr10 131000825 131001248 -9315517 + L2 LINE L2 2804 3210 -62 1020 204 51 14 chr10 131001411 131001627 -9315138 - MER58A DNA MER1_type 0 224 1 696 57 0 0 chr10 131001794 131001882 -9314883 + AluSp/q SINE Alu 215 302 -11 334 256 23 0 chr10 131002237 131002323 -9314442 - MLT1G LTR MaLR -168 422 335 1827 148 50 7 chr10 131002372 131002650 -9314115 - AluSx SINE Alu -22 290 1 250 326 22 0 chr10 131002680 131002772 -9313993 - MLT1G1 LTR MaLR -281 274 181 439 267 44 15 chr10 131002796 131002931 -9313834 + MSTC LTR MaLR 1 139 -235 342 171 53 13 chr10 131002932 131003008 -9313757 - LTR54 LTR ERV1 0 510 432 * 764 257 187 7 chr10 131002988 131003305 -9313460 - MER57A LTR ERV1 -58 345 1 955 180 99 30 chr10 131003306 131003539 -9313226 + MSTC LTR MaLR 180 428 0 522 246 70 0 chr10 131003542 131003684 -9313081 - MLT1G1 LTR MaLR -396 199 48 234 292 156 21 chr10 131003747 131003843 -9312922 - MIR SINE MIR -126 136 28 521 259 9 0 chr10 131004561 131004677 -9312088 - MIR3 SINE MIR -11 197 81 207 0 0 0 chr10 131004811 131004834 -9311931 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 131005383 131005417 -9311348 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 491 299 27 49 chr10 131005543 131005727 -9311038 + MER5A DNA MER1_type 3 182 -7 21 36 0 0 chr10 131009089 131009117 -9307648 + AT_rich Low_complexity Low_complexity 1 28 0 295 326 37 15 chr10 131009548 131009683 -9307082 + MIR3 SINE MIR 67 204 -4 283 305 42 0 chr10 131010387 131010482 -9306283 + MIR SINE MIR 114 212 -50 665 267 33 0 chr10 131010552 131010702 -9306063 - MIR SINE MIR -98 164 10 197 183 83 33 chr10 131010948 131011008 -9305757 + MIR SINE MIR 69 132 -76 454 208 10 10 chr10 131011140 131011241 -9305524 + MLT1J2 LTR MaLR 67 167 -283 626 291 79 62 chr10 131011426 131011803 -9304962 + L2 LINE L2 2893 3272 0 252 233 70 23 chr10 131011952 131012038 -9304727 + MIR SINE MIR 50 139 -69 353 238 25 0 chr10 131013582 131013662 -9303103 + MIR3 SINE MIR 91 172 -36 485 167 74 0 chr10 131014169 131014277 -9302488 + ORSL DNA AcHobo 3 118 -157 863 300 56 14 chr10 131014433 131014917 -9301848 - L1MEc LINE L1 -4769 1627 1124 283 226 171 37 chr10 131014966 131015183 -9301582 + L1ME4a LINE L1 5867 6112 -9 2222 113 106 0 chr10 131015602 131015931 -9300834 - THE1B LTR MaLR 0 364 1 313 292 0 0 chr10 131016034 131016106 -9300659 + MIR SINE MIR 52 123 -85 1775 201 33 38 chr10 131016124 131016516 -9300249 - MLT1B LTR MaLR 0 390 1 473 245 195 13 chr10 131016539 131016698 -9300067 - MER5A DNA MER1_type 0 189 2 2175 114 35 46 chr10 131016823 131017191 -9299574 + THE1B LTR MaLR 1 364 0 180 0 0 0 chr10 131017553 131017573 -9299192 + (T)n Simple_repeat Simple_repeat 1 20 0 230 217 17 19 chr10 131018593 131018652 -9298113 - MIR SINE MIR -61 147 94 503 253 169 0 chr10 131018673 131018827 -9297938 + MER5A DNA MER1_type 4 183 -6 271 301 32 0 chr10 131019627 131019720 -9297045 + MIR SINE MIR 16 111 -151 255 236 281 0 chr10 131019968 131020057 -9296708 - MER81 DNA DNA 0 114 1 195 221 44 29 chr10 131020092 131020160 -9296605 + MIR SINE MIR 102 170 -92 261 307 95 65 chr10 131020176 131020407 -9296358 + L2 LINE L2 3026 3263 -9 503 234 0 48 chr10 131020551 131020675 -9296090 - MIR SINE MIR -71 191 74 370 325 74 0 chr10 131021486 131021649 -9295116 + MIR SINE MIR 21 195 -67 632 252 88 60 chr10 131021863 131022293 -9294472 - L2 LINE L2 -249 3064 2625 211 217 47 89 chr10 131022514 131022608 -9294157 - MIR SINE MIR -105 103 15 2474 52 3 29 chr10 131022613 131022921 -9293844 - AluY SINE Alu -11 300 1 634 277 23 14 chr10 131023848 131024068 -9292697 + MLT1H LTR MaLR 21 242 -307 365 203 8 85 chr10 131024154 131024272 -9292493 + MLT1H LTR MaLR 433 541 -8 648 314 18 9 chr10 131024384 131024607 -9292158 - MIR SINE MIR -2 260 36 828 131 0 0 chr10 131024786 131024908 -9291857 + AluSg/x SINE Alu 181 302 -10 21 0 0 0 chr10 131025097 131025118 -9291647 + AT_rich Low_complexity Low_complexity 1 21 0 437 292 8 0 chr10 131025686 131025806 -9290959 - MIR SINE MIR -45 217 97 405 239 18 53 chr10 131025808 131025921 -9290844 - L2 LINE L2 -4 3309 3201 301 295 11 32 chr10 131026232 131026327 -9290438 - MIR SINE MIR -67 141 49 339 246 135 58 chr10 131026651 131026858 -9289907 + ORSL DNA AcHobo 53 275 0 246 221 179 7 chr10 131027077 131027185 -9289580 + MIR SINE MIR 20 150 -112 2510 51 27 0 chr10 131028508 131028803 -9287962 - AluY SINE Alu -8 303 1 469 286 70 16 chr10 131029143 131029328 -9287437 - MIR3 SINE MIR -11 197 3 318 107 0 0 chr10 131030519 131030575 -9286190 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 2505 60 0 0 chr10 131030579 131030877 -9285888 - AluY SINE Alu -13 298 1 1344 56 45 0 chr10 131030879 131031058 -9285707 - L1P2 LINE L1 -534 5620 5434 691 72 0 0 chr10 131031711 131031794 -9284971 + AluY SINE Alu 2 84 -234 184 281 47 31 chr10 131032006 131032070 -9284695 - MIR SINE MIR -61 147 83 737 269 9 37 chr10 131032078 131032294 -9284471 - L2 LINE L2 -1 3312 3103 341 221 0 15 chr10 131032510 131032646 -9284119 + (CAT)n Simple_repeat Simple_repeat 3 136 0 210 229 0 0 chr10 131032672 131032720 -9284045 + (CAT)n Simple_repeat Simple_repeat 1 48 0 249 265 44 0 chr10 131032952 131033020 -9283745 + LTR40a LTR ERVL 187 257 -262 1227 160 0 19 chr10 131033020 131033226 -9283539 + AluJb SINE Alu 100 301 -11 476 364 24 10 chr10 131033399 131033474 -9283291 + MIR SINE MIR 47 119 -143 2145 133 0 10 chr10 131033474 131033793 -9282972 - AluSx SINE Alu 0 312 1 476 364 24 10 chr10 131033793 131033923 -9282842 + MIR SINE MIR 119 255 -7 218 216 40 81 chr10 131034372 131034446 -9282319 - L2 LINE L2 -5 3267 3197 346 232 182 61 chr10 131034701 131034882 -9281883 + MIR SINE MIR 48 250 -12 1037 286 77 10 chr10 131034911 131035327 -9281438 - LTR16A LTR ERVL -6 444 1 2390 109 0 3 chr10 131036342 131036655 -9280110 - AluSx SINE Alu 0 312 1 408 272 93 40 chr10 131036926 131037277 -9279488 + L1MC4 LINE L1 5649 5964 -157 441 242 150 20 chr10 131038414 131038567 -9278198 + L2 LINE L2 3120 3292 -21 345 339 39 0 chr10 131038640 131038767 -9277998 + MIR SINE MIR 34 165 -97 262 310 120 0 chr10 131038818 131038918 -9277847 + MIR SINE MIR 151 262 0 909 117 0 0 chr10 131039499 131039619 -9277146 + FLAM_C SINE Alu 1 120 -23 246 158 13 26 chr10 131039719 131039795 -9276970 + CT-rich Low_complexity Low_complexity 1 75 0 224 315 14 0 chr10 131039813 131039886 -9276879 + CT-rich Low_complexity Low_complexity 6 79 0 214 175 0 0 chr10 131039925 131039965 -9276800 + (CA)n Simple_repeat Simple_repeat 1 40 0 2329 154 59 17 chr10 131041006 131041415 -9275350 - MSTB LTR MaLR 0 426 1 790 256 50 0 chr10 131041525 131041724 -9275041 - MER63A DNA MER1_type 0 210 2 219 250 0 0 chr10 131041738 131041786 -9274979 + MIR SINE MIR 87 134 -128 1855 176 43 48 chr10 131042047 131042445 -9274320 + MSTD LTR MaLR 1 396 0 449 246 78 67 chr10 131042504 131042683 -9274082 - MER5A DNA MER1_type -2 187 7 40 21 0 0 chr10 131042823 131042870 -9273895 + AT_rich Low_complexity Low_complexity 1 47 0 272 320 0 30 chr10 131042940 131043040 -9273725 - MIR SINE MIR -67 195 99 243 0 0 0 chr10 131043227 131043254 -9273511 + (CA)n Simple_repeat Simple_repeat 2 28 0 309 289 87 10 chr10 131043859 131043963 -9272802 - MIR SINE MIR -78 184 73 245 271 131 9 chr10 131044610 131044717 -9272048 - MIR SINE MIR -73 135 16 471 292 49 0 chr10 131045081 131045225 -9271540 - MIR SINE MIR -66 196 46 304 311 102 20 chr10 131045379 131045589 -9271176 - MIR SINE MIR -1 261 30 2043 57 4 0 chr10 131046194 131046438 -9270327 + AluSq SINE Alu 1 245 -68 578 105 84 32 chr10 131046599 131046694 -9270071 + FLAM_C SINE Alu 11 110 -33 207 244 0 0 chr10 131046702 131046743 -9270022 + CT-rich Low_complexity Low_complexity 2 42 0 2201 65 39 32 chr10 131046744 131047053 -9269712 - AluY SINE Alu 0 311 1 653 205 55 0 chr10 131047100 131047227 -9269538 + AluJo SINE Alu 2 135 -177 2028 161 45 32 chr10 131047243 131047789 -9268976 + MLT2A2 LTR ERVL 1 553 -1 1073 158 12 0 chr10 131047789 131047960 -9268805 + AluJo SINE Alu 136 308 -4 218 296 0 19 chr10 131048148 131048202 -9268563 - MIR SINE MIR -209 53 1 2265 101 10 0 chr10 131048224 131048512 -9268253 - AluSp SINE Alu -22 291 1 393 321 30 24 chr10 131048878 131049043 -9267722 + MIR3 SINE MIR 1 166 -42 1865 206 79 90 chr10 131050050 131050546 -9266219 - L1ME2 LINE L1 -13 6151 5651 2268 125 0 0 chr10 131050546 131050843 -9265922 - AluSg SINE Alu -13 297 1 1865 206 79 90 chr10 131050843 131051675 -9265090 - L1ME2 LINE L1 -513 5651 4618 203 243 0 0 chr10 131052053 131052090 -9264675 + G-rich Low_complexity Low_complexity 5 41 0 1877 212 82 76 chr10 131052092 131053173 -9263592 + L1ME2 LINE L1 4345 5659 -505 2266 125 0 0 chr10 131053173 131053470 -9263295 + AluSg SINE Alu 1 297 -13 1877 212 82 76 chr10 131053470 131053966 -9262799 + L1ME2 LINE L1 5659 6151 -13 393 321 30 24 chr10 131054973 131055138 -9261627 - MIR3 SINE MIR -42 166 1 2201 110 10 7 chr10 131055504 131055804 -9260961 + AluSp SINE Alu 1 301 -12 709 190 151 16 chr10 131055821 131056137 -9260628 - L1ME2 LINE L1 -125 6039 5580 396 235 0 12 chr10 131056145 131056264 -9260501 - L1ME1 LINE L1 0 6178 6057 1692 221 69 17 chr10 131056319 131057068 -9259697 - L1ME2 LINE L1 -594 5570 4778 181 325 12 24 chr10 131057077 131057160 -9259605 - MIR SINE MIR -67 141 60 422 314 64 6 chr10 131057344 131057500 -9259265 + MIR SINE MIR 79 243 -19 391 317 158 10 chr10 131058156 131058358 -9258407 - MIR SINE MIR -9 253 22 322 264 145 6 chr10 131058494 131058653 -9258112 - MIR SINE MIR -31 231 51 308 273 34 0 chr10 131058721 131058809 -9257956 + MIR3 SINE MIR 83 173 -35 446 305 152 5 chr10 131058829 131059039 -9257726 + MIR SINE MIR 15 255 -7 322 391 0 0 chr10 131059846 131060025 -9256740 + (CA)n Simple_repeat Simple_repeat 2 180 0 303 301 158 33 chr10 131062049 131062385 -9254380 - HAL1 LINE L1 -1204 1303 926 318 164 0 82 chr10 131062759 131062832 -9253933 + L2 LINE L2 3241 3307 -6 273 194 11 129 chr10 131064060 131064153 -9252612 + MIR SINE MIR 106 187 -75 307 311 68 34 chr10 131064980 131065128 -9251637 + MER5A DNA MER1_type 37 189 0 808 257 27 0 chr10 131066776 131066963 -9249802 + MER63A DNA MER1_type 1 192 -18 761 113 0 9 chr10 131067498 131067604 -9249161 + AluSp/q SINE Alu 194 298 -15 584 329 96 5 chr10 131069094 131069313 -9247452 - MIR SINE MIR -1 261 23 332 346 24 8 chr10 131069350 131069477 -9247288 + MIR3 SINE MIR 49 177 -31 434 242 17 42 chr10 131069929 131070049 -9246716 - MIR3 SINE MIR -22 186 70 328 288 169 0 chr10 131070905 131071023 -9245742 - MIR SINE MIR -18 244 107 2091 192 62 5 chr10 131071978 131072410 -9244355 + MLT1C LTR MaLR 7 463 -4 212 336 121 0 chr10 131073508 131073624 -9243141 - MIR SINE MIR -108 154 25 354 195 0 0 chr10 131073802 131073879 -9242886 + (CA)n Simple_repeat Simple_repeat 1 77 0 215 346 0 13 chr10 131074855 131074933 -9241832 + MIR SINE MIR 49 125 -83 272 127 0 0 chr10 131075671 131075718 -9241047 + MIR SINE MIR 106 153 -55 2085 144 3 0 chr10 131075719 131076018 -9240747 + AluSx SINE Alu 2 301 -11 222 269 106 50 chr10 131076355 131076496 -9240269 + MIR SINE MIR 34 182 -80 297 276 17 86 chr10 131077175 131077291 -9239474 + MIR SINE MIR 51 159 -49 502 270 34 27 chr10 131077315 131077463 -9239302 - MER5B DNA MER1_type -25 153 5 708 179 81 88 chr10 131078667 131078769 -9237996 - MER33 DNA MER1_type -2334 251 150 694 192 0 8 chr10 131078769 131078894 -9237871 - FLAM_C SINE Alu -9 124 1 708 179 81 88 chr10 131078894 131079051 -9237714 - MER33 DNA MER1_type -2435 150 1 323 298 18 9 chr10 131080028 131080142 -9236623 - MIR SINE MIR -141 121 7 903 187 0 113 chr10 131080263 131080493 -9236272 + MER20 DNA MER1_type 4 207 -12 236 313 143 52 chr10 131080527 131080834 -9235931 + L3 LINE CR1 1044 1378 -199 429 70 0 0 chr10 131081001 131081058 -9235707 + (CA)n Simple_repeat Simple_repeat 2 58 0 277 290 137 8 chr10 131082135 131082259 -9234506 + MIR SINE MIR 12 151 -111 2238 135 0 0 chr10 131082606 131082971 -9233794 + AluSq SINE Alu 1 365 0 190 308 68 60 chr10 131083221 131083338 -9233427 - MIR3 SINE MIR -87 121 4 472 294 30 65 chr10 131083809 131084010 -9232755 - MIR SINE MIR -2 260 67 311 255 11 21 chr10 131084058 131084152 -9232613 - MER81 DNA DNA -21 93 1 333 259 112 28 chr10 131084554 131084697 -9232068 - MIR3 SINE MIR -41 167 13 384 287 58 0 chr10 131084958 131085114 -9231651 - MIR SINE MIR -54 208 40 1906 272 120 13 chr10 131085851 131086477 -9230288 + MER115 DNA AcHobo 1 693 0 637 165 17 0 chr10 131089403 131089518 -9227247 + FRAM SINE Alu 56 172 -4 1327 179 0 13 chr10 131091040 131091269 -9225496 + AluJb SINE Alu 1 226 -86 1811 83 0 0 chr10 131091941 131092157 -9224608 - AluSp SINE Alu -97 216 1 341 264 47 9 chr10 131092159 131092265 -9224500 + L1ME1 LINE L1 6041 6150 -16 1647 232 66 17 chr10 131092452 131092832 -9223933 - Charlie4a DNA MER1_type -1453 508 97 2102 118 11 0 chr10 131092832 131093144 -9223621 - AluSp SINE Alu 0 315 1 1647 232 66 17 chr10 131093144 131093245 -9223520 - Charlie4a DNA MER1_type -1864 97 2 347 302 47 41 chr10 131094235 131094407 -9222358 + MER5B DNA MER1_type 3 175 -3 450 288 68 28 chr10 131095915 131096092 -9220673 + MIR SINE MIR 33 216 -46 308 261 0 0 chr10 131096518 131096583 -9220182 + L2 LINE L2 3203 3267 -5 332 369 17 17 chr10 131098338 131098514 -9218251 + L3 LINE CR1 1353 1528 -49 251 207 81 35 chr10 131098524 131098611 -9218154 + MER5B DNA MER1_type 6 96 -82 346 310 85 8 chr10 131098660 131098789 -9217976 + L2 LINE L2 2732 2870 -444 1905 198 5 27 chr10 131098803 131099176 -9217589 + MLT1A1 LTR MaLR 1 365 0 276 290 231 16 chr10 131099478 131099850 -9216915 - L2 LINE L2 -869 2445 1994 194 105 26 0 chr10 131100158 131100196 -9216569 + (TG)n Simple_repeat Simple_repeat 2 40 0 1908 161 108 8 chr10 131100264 131100625 -9216140 - MLT2C1 LTR ERVL 0 397 1 1943 164 0 3 chr10 131101649 131101942 -9214823 + AluJb SINE Alu 1 292 -20 1499 205 73 7 chr10 131101985 131102409 -9214356 + Charlie4a DNA MER1_type 1 452 -56 361 229 56 49 chr10 131102437 131102581 -9214184 - MER112 DNA MER1_type 0 260 116 246 326 0 70 chr10 131102643 131102729 -9214036 + L2 LINE L2 3150 3229 -43 2978 157 20 31 chr10 131102750 131103293 -9213472 - MLT2B3 LTR ERVL -14 540 4 306 355 58 0 chr10 131103388 131103509 -9213256 - L2 LINE L2 -7 3306 3179 219 36 0 0 chr10 131103531 131103559 -9213206 + (CAA)n Simple_repeat Simple_repeat 2 29 0 522 174 132 84 chr10 131104114 131104168 -9212597 - MER96 DNA MER1_type? 0 175 125 2716 104 6 6 chr10 131104168 131104532 -9212233 - THE1B LTR MaLR 0 364 1 522 174 132 84 chr10 131104532 131104644 -9212121 - MER96 DNA MER1_type? -50 125 1 513 254 78 99 chr10 131104662 131104945 -9211820 - L1MEd LINE L1 -4706 1678 1402 696 310 87 42 chr10 131104988 131105710 -9211055 - L1MEd LINE L1 -4912 1460 706 1705 276 150 18 chr10 131106089 131107141 -9209624 - L2 LINE L2 0 3313 2130 322 331 104 18 chr10 131107813 131107976 -9208789 + L2 LINE L2 3122 3298 -15 192 70 70 0 chr10 131108469 131108512 -9208253 + (CA)n Simple_repeat Simple_repeat 2 47 0 248 326 0 11 chr10 131108916 131109005 -9207760 - MIR SINE MIR 0 262 175 514 351 55 16 chr10 131109113 131109421 -9207344 + MLT1K LTR MaLR 15 334 -254 665 266 147 9 chr10 131109436 131109756 -9207009 - MLT1G1 LTR MaLR -8 587 224 2618 228 19 14 chr10 131109787 131110504 -9206261 - L1ME1 LINE L1 -224 5942 5214 774 209 47 47 chr10 131110477 131110711 -9206054 + L1ME1 LINE L1 4969 5202 -944 * 188 375 83 42 chr10 131110711 131110855 -9205910 - MIR SINE MIR -100 162 13 557 198 0 0 chr10 131111102 131111198 -9205567 + FLAM_A SINE Alu 22 117 -25 314 293 171 0 chr10 131111939 131112120 -9204645 - MIR SINE MIR -9 253 42 221 304 0 0 chr10 131113304 131113360 -9203405 + L2 LINE L2 3160 3215 -57 208 309 0 0 chr10 131113928 131113983 -9202782 - L2 LINE L2 -58 3214 3160 1020 286 61 41 chr10 131113986 131114546 -9202219 + MLT1K LTR MaLR 11 581 -7 2332 95 0 3 chr10 131116718 131117014 -9199751 + AluSx SINE Alu 1 295 -17 186 347 12 48 chr10 131117682 131117849 -9198916 + L2 LINE L2 2557 2717 -597 448 282 8 16 chr10 131118334 131118458 -9198307 + L2 LINE L2 3191 3313 0 289 307 22 15 chr10 131118958 131119095 -9197670 + LTR16C LTR ERVL 354 491 0 201 341 12 24 chr10 131119199 131119284 -9197481 + MIR SINE MIR 66 149 -113 197 316 21 63 chr10 131119721 131119816 -9196949 + L2 LINE L2 2885 2975 -338 193 279 10 96 chr10 131120528 131120632 -9196133 + MIR SINE MIR 109 203 -59 374 306 24 24 chr10 131120791 131120915 -9195850 - MIR3 SINE MIR -33 175 52 2196 192 73 58 chr10 131120928 131121048 -9195717 - MER89 LTR ERV1 0 559 442 1818 171 0 23 chr10 131121048 131121352 -9195413 + AluJo SINE Alu 1 297 -15 2196 192 73 58 chr10 131121352 131121782 -9194983 - MER89 LTR ERV1 -117 442 1 1615 110 140 19 chr10 131122153 131122453 -9194312 - AluSc SINE Alu 0 299 1 1093 240 125 3 chr10 131122778 131123065 -9193700 - MER21B LTR ERV1 -523 340 19 422 324 44 0 chr10 131123227 131123409 -9193356 - LTR16A1 LTR ERVL -3 454 265 * 522 293 50 0 chr10 131123383 131123581 -9193184 - LTR16C LTR ERVL -177 314 107 2164 126 0 3 chr10 131123900 131124202 -9192563 + AluSx SINE Alu 1 301 -11 316 236 47 27 chr10 131124304 131124452 -9192313 + MER31-int LTR ERV1 1291 1441 -3495 11926 128 15 3 chr10 131124587 131126439 -9190326 + Tigger1 DNA MER2_type 1 1875 -543 1382 141 10 72 chr10 131126439 131126581 -9190184 + Tigger1 DNA MER2_type 2083 2199 -219 2219 118 3 0 chr10 131126581 131126877 -9189888 - AluSx SINE Alu -15 297 1 1382 141 10 72 chr10 131126877 131127025 -9189740 + Tigger1 DNA MER2_type 2199 2355 -63 336 240 40 40 chr10 131127033 131127208 -9189557 + MER31-int LTR ERV1 1698 1872 -3064 324 264 5 96 chr10 131127506 131127638 -9189127 - Charlie1 DNA MER1_type 0 2761 2653 5223 74 46 1 chr10 131127638 131128354 -9188411 - L1PA13 LINE L1 0 6163 5416 324 264 5 96 chr10 131128354 131128429 -9188336 - Charlie1 DNA MER1_type -108 2653 2573 253 184 0 0 chr10 131128425 131128474 -9188291 - Charlie1 DNA MER1_type -2656 105 57 * 471 236 36 67 chr10 131128575 131128697 -9188068 + MER31-int LTR ERV1 3643 3760 -1176 2697 108 45 35 chr10 131128697 131129071 -9187694 + MSTA LTR MaLR 1 382 -46 1753 170 0 7 chr10 131129071 131129382 -9187383 - AluJo SINE Alu 0 319 11 2697 108 45 35 chr10 131129382 131129430 -9187335 + MSTA LTR MaLR 382 428 0 471 236 36 67 chr10 131129430 131129472 -9187293 + MER31-int LTR ERV1 3760 3802 -1134 2795 178 46 31 chr10 131129497 131130110 -9186655 - L1MB8 LINE L1 0 6178 5557 548 292 49 49 chr10 131130118 131130361 -9186404 - MIR SINE MIR 0 262 20 350 216 101 0 chr10 131130929 131131040 -9185725 + MIR SINE MIR 112 235 -27 398 244 115 83 chr10 131131075 131131161 -9185604 - MIR SINE MIR -21 241 146 2318 98 0 3 chr10 131131161 131131457 -9185308 - AluY SINE Alu -16 295 1 398 244 115 83 chr10 131131457 131131526 -9185239 - MIR SINE MIR -116 146 81 504 316 36 21 chr10 131131574 131131767 -9184998 + MIR SINE MIR 20 215 -47 521 119 46 0 chr10 131131844 131131954 -9184811 - L1P4 LINE L1 -669 5496 5373 231 311 57 9 chr10 131132784 131132890 -9183875 + MIR3 SINE MIR 48 158 -50 508 266 53 16 chr10 131132892 131133080 -9183685 - MER117 DNA MER1_type 0 197 3 2303 108 0 0 chr10 131133190 131133487 -9183278 - AluSg SINE Alu -13 297 1 296 338 49 29 chr10 131134424 131134628 -9182137 - L2 LINE L2 -71 3201 2994 804 240 14 10 chr10 131135451 131135659 -9181106 - MER3 DNA MER1_type 0 209 1 946 177 23 84 chr10 131135687 131135769 -9180996 + MER58A DNA MER1_type 20 105 -2315 2060 125 7 0 chr10 131135769 131136048 -9180717 - AluSx SINE Alu -1 311 31 946 177 23 84 chr10 131136048 131136180 -9180585 + MER58A DNA MER1_type 105 221 -3 185 159 58 130 chr10 131136837 131136906 -9179859 + MER5A DNA MER1_type 85 148 -41 305 98 0 0 chr10 131138539 131138580 -9178185 + Alu SINE Alu 5 45 -257 1336 90 0 0 chr10 131138580 131138746 -9178019 + AluSg/x SINE Alu 137 302 -10 394 272 56 36 chr10 131138897 131139066 -9177699 - MIR SINE MIR -58 150 31 263 248 106 66 chr10 131140690 131140897 -9175868 + L2 LINE L2 2770 3008 -264 2151 112 0 48 chr10 131140943 131141256 -9175509 - AluSg SINE Alu -7 303 6 535 285 240 25 chr10 131141407 131141863 -9174902 + L2 LINE L2 2756 3313 0 1485 234 116 35 chr10 131142214 131142638 -9174127 - LTR22A LTR ERVK 0 458 1 215 260 94 39 chr10 131143839 131143920 -9172845 + MIR SINE MIR 20 104 -104 518 265 62 92 chr10 131143936 131144306 -9172459 - L2 LINE L2 -3 3310 2952 242 301 38 65 chr10 131144577 131144763 -9172002 + MIR SINE MIR 39 219 -43 865 214 161 21 chr10 131146044 131146324 -9170441 - LTR36 LTR ERV1 0 611 293 573 184 68 25 chr10 131146389 131146552 -9170213 - LTR36 LTR ERV1 -441 170 1 203 118 88 0 chr10 131146852 131146886 -9169879 + MIR SINE MIR 106 142 -120 1023 183 150 74 chr10 131147693 131148057 -9168708 + MLT1B LTR MaLR 1 364 -1 504 340 24 28 chr10 131148944 131149156 -9167609 - MIR SINE MIR -5 257 47 839 256 121 50 chr10 131149322 131149786 -9166979 - MLT1D LTR MaLR -8 497 1 200 259 37 0 chr10 131151083 131151137 -9165628 + GA-rich Low_complexity Low_complexity 5 60 0 446 231 26 34 chr10 131151946 131152063 -9164702 - MIR SINE MIR -109 153 38 877 276 71 22 chr10 131153459 131153865 -9162900 + L1MC5 LINE L1 7506 7931 -30 1957 100 4 4 chr10 131154185 131154454 -9162311 - AluSc SINE Alu -14 295 27 718 291 90 14 chr10 131154756 131155464 -9161301 - L1ME1 LINE L1 -285 5881 5090 594 268 89 49 chr10 131155568 131155613 -9161152 - L1ME1 LINE L1 -2969 3177 3135 1876 140 0 14 chr10 131155613 131155891 -9160874 - AluSx SINE Alu 0 312 39 594 268 89 49 chr10 131155891 131156498 -9160267 - L1ME1 LINE L1 -3011 3135 2499 908 231 70 78 chr10 131157078 131157524 -9159241 + MLT1J LTR MaLR 70 511 0 1946 107 52 0 chr10 131159248 131159566 -9157199 + AluSx SINE Alu 1 332 0 1175 188 94 41 chr10 131160368 131160449 -9156316 + MLT1A1 LTR MaLR 1 76 -289 1631 172 47 24 chr10 131160449 131160745 -9156020 + AluJb SINE Alu 1 303 -9 1175 188 94 41 chr10 131160745 131161003 -9155762 + MLT1A1 LTR MaLR 76 358 -7 2327 95 0 0 chr10 131161135 131161461 -9155304 + AluSp SINE Alu 2 327 0 1085 226 181 3 chr10 131162484 131162794 -9153971 + MLT1A1 LTR MaLR 1 365 0 2172 128 56 11 chr10 131162799 131163158 -9153607 + THE1C LTR MaLR 1 375 0 319 250 125 31 chr10 131166154 131166282 -9150483 - MIR SINE MIR -112 150 11 650 204 86 11 chr10 131167209 131167429 -9149336 + MER106B DNA MER1_type 1 234 -2 232 339 75 11 chr10 131167677 131167851 -9148914 + L1ME LINE L1 5705 5889 -232 190 293 104 38 chr10 131168849 131168955 -9147810 - L2 LINE L2 -79 3234 3122 608 316 0 17 chr10 131170465 131170639 -9146126 - MER5B DNA MER1_type 0 178 8 340 286 41 10 chr10 131170672 131170770 -9145995 + MIR SINE MIR 105 205 -57 515 250 57 34 chr10 131171416 131171592 -9145173 + MIR SINE MIR 13 192 -70 243 0 0 0 chr10 131171722 131171749 -9145016 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 191 203 391 0 chr10 131172672 131172741 -9144024 + MER5A DNA MER1_type 13 108 -81 4254 125 8 5 chr10 131173719 131174352 -9142413 + MER41B LTR ERV1 1 635 0 305 248 36 80 chr10 131174638 131174775 -9141990 + MLT1K LTR MaLR 458 588 0 1575 219 103 16 chr10 131174996 131175421 -9141344 + MLT1C LTR MaLR 1 462 -5 719 281 100 38 chr10 131175660 131175825 -9140940 - L3 LINE CR1 -125 1452 1299 2368 91 45 96 chr10 131175825 131176222 -9140543 + MER51B LTR ERV1 1 377 0 719 281 100 38 chr10 131176222 131176376 -9140389 - L3 LINE CR1 -278 1299 1113 477 191 19 9 chr10 131176434 131176539 -9140226 - MER81 DNA DNA -7 107 2 2484 66 3 3 chr10 131176618 131176919 -9139846 - AluY SINE Alu -10 301 1 21 0 0 0 chr10 131176983 131177004 -9139761 + AT_rich Low_complexity Low_complexity 1 21 0 296 344 55 39 chr10 131177169 131177297 -9139468 - L2 LINE L2 -20 3252 3123 2700 150 71 15 chr10 131177523 131178071 -9138694 + LTR59 LTR ERV1 1 579 -18 323 148 0 0 chr10 131178375 131178429 -9138336 - AluSq SINE Alu -6 297 244 1139 48 0 0 chr10 131178436 131178561 -9138204 - AluSq SINE Alu -129 184 60 1971 149 174 42 chr10 131178881 131178984 -9137781 + LTR36 LTR ERV1 13 101 -510 2367 103 3 3 chr10 131178984 131179294 -9137471 + AluSx SINE Alu 1 310 -2 1971 149 174 42 chr10 131179294 131179713 -9137052 + LTR36 LTR ERV1 101 604 -7 621 226 7 0 chr10 131179733 131179870 -9136895 + L1MB5 LINE L1 6037 6174 0 2153 120 36 3 chr10 131180565 131180824 -9135941 - LTR10A LTR ERV1 -21 612 293 2436 91 0 3 chr10 131180824 131181133 -9135632 + AluY SINE Alu 1 308 -3 2153 120 36 3 chr10 131181133 131181253 -9135512 - LTR10A LTR ERV1 -340 293 178 286 172 0 0 chr10 131181253 131181311 -9135454 - LTR10A LTR ERV1 -374 235 178 1034 204 28 28 chr10 131181320 131181575 -9135190 - LTR10A LTR ERV1 -354 255 1 199 307 188 10 chr10 131181690 131181791 -9134974 + L2 LINE L2 3140 3258 -14 231 114 0 0 chr10 131181795 131181830 -9134935 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 1395 226 67 32 chr10 131182057 131182124 -9134641 - MLT1C LTR MaLR -1 466 403 1990 80 8 15 chr10 131182124 131182386 -9134379 + AluSp SINE Alu 6 265 -48 1395 226 67 32 chr10 131182386 131182720 -9134045 - MLT1C LTR MaLR -64 403 51 383 188 54 0 chr10 131182720 131182821 -9133944 - MLT1C LTR MaLR -267 123 8 2566 58 3 0 chr10 131184170 131184478 -9132287 + AluY SINE Alu 1 309 -2 2112 120 3 26 chr10 131185699 131185722 -9131043 - AluSx SINE Alu -10 302 280 387 60 0 0 chr10 131185722 131185772 -9130993 + (TG)n Simple_repeat Simple_repeat 2 51 0 2112 120 3 26 chr10 131185772 131186057 -9130708 - AluSx SINE Alu -32 280 1 907 146 6 39 chr10 131186063 131186241 -9130524 - L1MB2 LINE L1 -2 6169 5998 239 354 6 31 chr10 131187188 131187349 -9129416 + L1ME4a LINE L1 5596 5752 -369 249 265 31 0 chr10 131188447 131188545 -9128220 + L1ME4a LINE L1 6020 6120 -1 1433 151 68 93 chr10 131188564 131188875 -9127890 - AluJb SINE Alu -9 303 1 183 80 0 0 chr10 131189237 131189262 -9127503 + (A)n Simple_repeat Simple_repeat 1 25 0 483 314 41 25 chr10 131190254 131190496 -9126269 + MIR SINE MIR 12 257 -5 204 67 0 0 chr10 131191009 131191039 -9125726 + (T)n Simple_repeat Simple_repeat 1 30 0 400 303 43 56 chr10 131191803 131192072 -9124693 + L2 LINE L2 2220 2484 -830 2526 127 8 3 chr10 131192072 131192434 -9124331 + THE1B LTR MaLR 1 364 0 400 303 43 56 chr10 131192434 131192537 -9124228 + L2 LINE L2 2484 2587 -727 183 245 57 0 chr10 131192777 131192830 -9123935 + L2 LINE L2 2920 2975 -338 2910 264 67 30 chr10 131193441 131194111 -9122654 - L1ME3A LINE L1 -318 5921 5277 1638 124 120 48 chr10 131194111 131194402 -9122363 - AluJb SINE Alu 0 312 1 2910 264 67 30 chr10 131194402 131194644 -9122121 - L1ME3A LINE L1 -962 5277 5045 2202 108 3 10 chr10 131194644 131194951 -9121814 - AluSc SINE Alu -4 305 1 2910 264 67 30 chr10 131194951 131195810 -9120955 - L1ME3A LINE L1 -1194 5045 4087 203 179 0 0 chr10 131195812 131195851 -9120914 + T-rich Low_complexity Low_complexity 1 39 0 42 20 0 0 chr10 131196172 131196221 -9120544 + AT_rich Low_complexity Low_complexity 1 49 0 1523 257 45 7 chr10 131196224 131196687 -9120078 - L1ME3A LINE L1 -3016 3199 2719 832 280 126 19 chr10 131196778 131197296 -9119469 - L1ME3A LINE L1 -4282 2114 1542 200 322 34 0 chr10 131197402 131197461 -9119304 + MIR SINE MIR 52 112 -150 433 304 82 29 chr10 131197519 131197563 -9119202 + MIR SINE MIR 5 45 -217 1951 127 72 36 chr10 131197563 131197925 -9118840 - THE1C LTR MaLR 0 375 1 433 304 82 29 chr10 131197925 131198123 -9118642 + MIR SINE MIR 45 260 -2 21 57 0 0 chr10 131198295 131198330 -9118435 + AT_rich Low_complexity Low_complexity 1 35 0 318 26 0 0 chr10 131199344 131199383 -9117382 + (CAA)n Simple_repeat Simple_repeat 2 40 0 364 289 23 80 chr10 131199550 131199813 -9116952 + L1MC/D LINE L1 561 808 -5311 3416 160 44 8 chr10 131199889 131200478 -9116287 + Tigger7 DNA MER2_type 3 612 -1875 340 263 11 0 chr10 131200506 131200601 -9116164 + (CATATA)n Simple_repeat Simple_repeat 2 97 0 403 200 33 0 chr10 131200601 131200691 -9116074 - MIR SINE MIR -59 203 111 582 288 92 25 chr10 131200898 131201465 -9115300 + L1MC/D LINE L1 2096 2700 -3429 315 253 13 0 chr10 131201504 131201583 -9115182 + L1M4 LINE L1 4265 4344 -1802 194 294 168 8 chr10 131203148 131203267 -9113498 - MIR3 SINE MIR -67 141 4 1627 213 85 81 chr10 131203639 131204241 -9112524 - MLT1E2 LTR MaLR -9 617 14 315 252 77 49 chr10 131204967 131205110 -9111655 + MER5B DNA MER1_type 25 171 -7 261 215 204 0 chr10 131205120 131205213 -9111552 - MIR SINE MIR -59 149 38 2251 116 7 0 chr10 131206175 131206485 -9110280 - AluSx SINE Alu 0 312 1 254 161 129 0 chr10 131208320 131208382 -9108383 + LTR33 LTR ERVL 450 519 -2 312 327 83 12 chr10 131208384 131208552 -9108213 - MIR SINE MIR -78 184 5 381 256 174 6 chr10 131209196 131209368 -9107397 + L1MC/D LINE L1 3305 3505 -2624 855 168 0 0 chr10 131209369 131209494 -9107271 + FAM SINE Alu 1 125 -60 1224 181 4 31 chr10 131209494 131209721 -9107044 + AluJo SINE Alu 85 305 -7 2094 131 0 16 chr10 131209798 131210111 -9106654 - AluSq SINE Alu -5 308 1 442 261 14 110 chr10 131210121 131210542 -9106223 + L1MC/D LINE L1 3575 3948 -2181 719 171 0 0 chr10 131210597 131210708 -9106057 + FLAM_C SINE Alu 2 112 -31 586 278 77 55 chr10 131210792 131211112 -9105653 + L1MC/D LINE L1 4918 5229 -1074 2069 138 0 0 chr10 131211112 131211403 -9105362 - AluSx SINE Alu -21 291 1 586 278 77 55 chr10 131211403 131211707 -9105058 + L1MC/D LINE L1 5229 5555 -748 405 0 0 0 chr10 131212491 131212536 -9104229 + (TG)n Simple_repeat Simple_repeat 2 46 0 1786 175 155 10 chr10 131212655 131213067 -9103698 + MER101 LTR ERV1 1 472 -2 382 310 29 17 chr10 131213339 131213513 -9103252 + MIR SINE MIR 58 233 -29 1927 148 43 20 chr10 131213513 131213864 -9102901 - MLT1A1 LTR MaLR 0 365 7 319 227 0 0 chr10 131214425 131214491 -9102274 + L2 LINE L2 3187 3252 -20 555 272 25 0 chr10 131215419 131215581 -9101184 + MIR SINE MIR 59 224 -38 198 273 15 45 chr10 131215638 131215704 -9101061 + L2 LINE L2 3193 3256 -16 307 27 0 0 chr10 131216176 131216213 -9100552 - tRNA-Cys-TGC tRNA tRNA -38 37 1 220 242 65 0 chr10 131217289 131217351 -9099414 + MIR SINE MIR 99 164 -98 204 108 0 27 chr10 131218857 131218894 -9097871 - L2 LINE L2 -94 3219 3184 270 231 19 9 chr10 131218962 131219070 -9097695 + GA-rich Low_complexity Low_complexity 3 111 0 248 172 99 179 chr10 131219829 131219980 -9096785 + L1ME2 LINE L1 6007 6145 -19 1638 162 64 102 chr10 131221765 131222247 -9094518 - MLT1C LTR MaLR 0 467 4 278 297 0 0 chr10 131222300 131222364 -9094401 - L2 LINE L2 -4 3309 3246 23 0 0 0 chr10 131222549 131222572 -9094193 + GC_rich Low_complexity Low_complexity 1 23 0 1529 150 40 22 chr10 131223117 131223391 -9093374 - MER50 LTR ERV1 -23 711 433 1073 124 30 128 chr10 131223374 131223639 -9093126 - MER50 LTR ERV1 -494 240 2 * 203 323 0 0 chr10 131224727 131224792 -9091973 + (TATG)n Simple_repeat Simple_repeat 2 66 0 24 32 0 0 chr10 131224842 131224873 -9091892 + AT_rich Low_complexity Low_complexity 1 31 0 225 230 23 35 chr10 131224919 131225006 -9091759 + GA-rich Low_complexity Low_complexity 3 88 0 474 259 116 107 chr10 131225731 131226441 -9090324 + L2 LINE L2 2262 2977 -337 2024 135 13 0 chr10 131226547 131226850 -9089915 + AluSx SINE Alu 1 307 -5 196 308 171 0 chr10 131227849 131227966 -9088799 + L2 LINE L2 3125 3261 -11 1092 171 0 0 chr10 131228050 131228214 -9088551 - FRAM SINE Alu -13 163 1 421 250 57 21 chr10 131229108 131229248 -9087517 - L2 LINE L2 -4 3309 3165 308 263 145 22 chr10 131229404 131229583 -9087182 + L1ME LINE L1 5622 5822 -299 * 349 306 92 58 chr10 131229575 131229902 -9086863 + L1MDa LINE L1 3 340 -6200 1445 224 75 64 chr10 131230456 131230964 -9085801 + L1MDa LINE L1 909 1425 -5118 2263 157 21 30 chr10 131230964 131231397 -9085368 - MSTB1 LTR MaLR -3 429 1 1445 224 75 64 chr10 131231397 131231463 -9085302 + L1MDa LINE L1 1425 1489 -5054 533 197 88 52 chr10 131231439 131231632 -9085133 + L1MDa LINE L1 1776 1975 -4565 * 24 0 0 0 chr10 131231874 131231898 -9084867 + AT_rich Low_complexity Low_complexity 1 24 0 2269 158 15 23 chr10 131231918 131232317 -9084448 + MSTD LTR MaLR 1 396 0 1276 132 20 0 chr10 131233309 131233513 -9083252 - MER20 DNA MER1_type -8 211 4 338 244 148 24 chr10 131233987 131234196 -9082569 + L1MC4 LINE L1 7086 7320 -722 486 256 76 69 chr10 131234300 131234571 -9082194 + L1MC4 LINE L1 7318 7585 -457 2795 10 0 3 chr10 131234571 131234874 -9081891 + AluY SINE Alu 2 303 -8 486 256 76 69 chr10 131234874 131234914 -9081851 + L1MC4 LINE L1 7585 7623 -419 2362 102 51 20 chr10 131234914 131235267 -9081498 + THE1B LTR MaLR 1 364 0 486 256 76 69 chr10 131235267 131235336 -9081429 + L1MC4 LINE L1 7623 7806 -236 2474 230 86 57 chr10 131235358 131236153 -9080612 - MER21B LTR ERV1 -21 842 25 433 186 8 110 chr10 131236175 131236293 -9080472 - MER21B LTR ERV1 -757 106 1 21 57 0 0 chr10 131236362 131236397 -9080368 + AT_rich Low_complexity Low_complexity 1 35 0 930 288 65 54 chr10 131236697 131237086 -9079679 + L1ME3 LINE L1 4600 4983 -1179 2416 48 0 0 chr10 131237086 131237376 -9079389 - L1PA5 LINE L1 0 6154 5865 930 288 65 54 chr10 131237376 131238307 -9078458 + L1ME3 LINE L1 4983 5930 -232 1992 128 38 61 chr10 131238500 131238843 -9077922 + MER1B DNA MER1_type 3 337 0 3506 76 0 5 chr10 131240046 131240492 -9076273 + MLT2A1 LTR ERVL 1 444 0 10993 64 7 12 chr10 131240492 131240681 -9076084 + HERVL-A1 LTR ERVL 1 190 -5464 1873 157 0 3 chr10 131240681 131240974 -9075791 + AluSx SINE Alu 3 294 -18 10993 64 7 12 chr10 131240974 131242175 -9074590 + HERVL-A1 LTR ERVL 190 1383 -4271 * 29244 64 7 3 chr10 131242169 131245724 -9071041 + HERVL-A1 LTR ERVL 2087 5654 0 3529 76 0 5 chr10 131245724 131246170 -9070595 + MLT2A1 LTR ERVL 1 444 0 2015 208 41 12 chr10 131246445 131246936 -9069829 - MLT1D LTR MaLR 0 505 1 913 190 88 29 chr10 131247567 131247772 -9068993 + MER20 DNA MER1_type 1 217 -2 369 310 105 41 chr10 131248249 131248591 -9068174 - L2 LINE L2 -1 3312 2949 198 0 0 0 chr10 131248655 131248677 -9068088 + (TAA)n Simple_repeat Simple_repeat 2 23 0 829 178 0 6 chr10 131248817 131248974 -9067791 + L1MB8 LINE L1 6022 6177 -1 1558 251 68 78 chr10 131248993 131249881 -9066884 + HAL1 LINE L1 1599 2477 -30 23 0 0 0 chr10 131249882 131249905 -9066860 + AT_rich Low_complexity Low_complexity 1 23 0 262 279 12 12 chr10 131250545 131250631 -9066134 + MIR SINE MIR 6 91 -171 694 218 98 6 chr10 131251950 131252124 -9064641 - MIR SINE MIR -7 255 66 322 316 40 40 chr10 131252707 131252884 -9063881 + L1MC/D LINE L1 2350 2526 -3620 322 350 87 35 chr10 131252919 131253205 -9063560 + L1MC/D LINE L1 2612 2912 -3234 2660 230 34 39 chr10 131253326 131253809 -9062956 + L1MC/D LINE L1 4341 4825 -1417 1649 182 3 23 chr10 131253809 131254116 -9062649 + AluJb SINE Alu 5 305 -7 2660 230 34 39 chr10 131254116 131254257 -9062508 + L1MC/D LINE L1 4825 4965 -1277 2429 93 64 6 chr10 131254257 131254601 -9062164 + THE1B LTR MaLR 1 364 0 2660 230 34 39 chr10 131254601 131255271 -9061494 + L1MC/D LINE L1 4965 5621 -621 265 136 0 0 chr10 131255298 131255342 -9061423 - Alu SINE Alu -6 302 259 * 380 145 0 0 chr10 131255327 131255386 -9061379 - Alu SINE Alu -248 53 1 285 316 77 46 chr10 131255438 131256153 -9060612 + L1M4 LINE L1 4487 5223 -923 207 0 0 0 chr10 131256774 131256797 -9059968 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 297 0 0 0 chr10 131256796 131256829 -9059936 + (TG)n Simple_repeat Simple_repeat 2 34 0 1254 222 137 34 chr10 131257419 131257856 -9058909 - MLT1D LTR MaLR -3 502 21 204 127 73 18 chr10 131257861 131257916 -9058849 + G-rich Low_complexity Low_complexity 2 59 0 1005 186 56 26 chr10 131257947 131258178 -9058587 + ORSL DNA AcHobo 37 274 -1 1290 145 66 137 chr10 131258382 131258464 -9058301 + MLT1A1 LTR MaLR 1 87 -278 2042 123 3 0 chr10 131258464 131258756 -9058009 + AluSp SINE Alu 1 293 -20 1290 145 66 137 chr10 131258756 131259066 -9057699 + MLT1A1 LTR MaLR 87 365 0 229 368 26 8 chr10 131259077 131259194 -9057571 + MIR SINE MIR 96 214 -48 898 258 77 0 chr10 131259831 131260052 -9056713 - MIR SINE MIR -15 247 10 483 278 86 25 chr10 131260327 131260586 -9056179 - L2 LINE L2 -247 3066 2794 2593 128 14 43 chr10 131260587 131261032 -9055733 + MSTB1 LTR MaLR 1 432 0 26 30 0 0 chr10 131263624 131263657 -9053108 + AT_rich Low_complexity Low_complexity 1 33 0 384 223 89 36 chr10 131263910 131264022 -9052743 + L2 LINE L2 3177 3294 -19 1835 139 27 0 chr10 131264091 131264385 -9052380 + AluSx SINE Alu 1 302 -10 382 246 92 28 chr10 131265009 131265151 -9051614 - MIR SINE MIR -3 259 109 266 306 48 27 chr10 131265362 131265509 -9051256 - L2 LINE L2 -3 3310 3161 1961 157 40 10 chr10 131267251 131267646 -9049119 - L1MB3 LINE L1 0 6183 5777 206 327 141 45 chr10 131268665 131268821 -9047944 - L2 LINE L2 0 3272 3102 776 203 0 0 chr10 131269029 131269162 -9047603 - FLAM_A SINE Alu 0 133 1 962 35 0 0 chr10 131269344 131269460 -9047305 - AluY SINE Alu -10 301 186 310 352 108 39 chr10 131270484 131270816 -9045949 + HAL1 LINE L1 4 358 -2149 1100 133 22 6 chr10 131270816 131270997 -9045768 + AluSg/x SINE Alu 117 300 -12 398 218 104 90 chr10 131271017 131271228 -9045537 + HAL1 LINE L1 418 631 -1876 * 1752 225 127 112 chr10 131271227 131271988 -9044777 + HAL1 LINE L1 896 1644 -863 3221 148 31 8 chr10 131271988 131272500 -9044265 - MER1A DNA MER1_type 0 527 4 1752 225 127 112 chr10 131272500 131273155 -9043610 + HAL1 LINE L1 1644 2338 -169 2123 119 0 3 chr10 131273155 131273457 -9043308 + AluSx SINE Alu 1 301 -11 1752 225 127 112 chr10 131273457 131273508 -9043257 + HAL1 LINE L1 2338 2387 -120 212 349 0 0 chr10 131273669 131273732 -9043033 - L2 LINE L2 0 3272 3210 30 0 0 0 chr10 131274385 131274415 -9042350 + AT_rich Low_complexity Low_complexity 1 30 0 378 286 64 58 chr10 131275193 131275350 -9041415 - HAL1b LINE L1 -412 936 776 1921 91 102 0 chr10 131275350 131275625 -9041140 - AluSq SINE Alu -10 303 1 378 286 64 58 chr10 131275625 131275638 -9041127 - HAL1b LINE L1 -572 776 765 1622 263 70 11 chr10 131275707 131276236 -9040529 - L1ME3 LINE L1 -14 6148 5589 2792 162 52 16 chr10 131276238 131276743 -9040022 + Tigger7 DNA MER2_type 1 523 -1964 339 218 46 23 chr10 131276743 131276830 -9039935 + Tigger7 DNA MER2_type 2498 2586 -1 717 267 48 0 chr10 131276832 131277042 -9039723 - L1ME3 LINE L1 -577 5587 5368 411 253 27 104 chr10 131277067 131277288 -9039477 + L2 LINE L2 2870 3073 -199 1504 214 26 101 chr10 131277313 131277400 -9039365 + MLT1C LTR MaLR 10 102 -365 2125 111 0 0 chr10 131277400 131277698 -9039067 + AluY SINE Alu 1 298 -13 1504 214 26 101 chr10 131277698 131278105 -9038660 + MLT1C LTR MaLR 102 467 0 1031 269 148 42 chr10 131278203 131278871 -9037894 + L2 LINE L2 2432 3186 -127 2421 112 97 5 chr10 131278871 131279263 -9037502 + MSTA LTR MaLR 1 428 0 1031 269 148 42 chr10 131279263 131279399 -9037366 + L2 LINE L2 3186 3306 -7 204 294 59 12 chr10 131279401 131279486 -9037279 + L2 LINE L2 3173 3261 -11 2106 99 0 0 chr10 131279536 131279844 -9036921 + AluSx SINE Alu 1 308 0 303 227 82 52 chr10 131280240 131280337 -9036428 - L1MC4 LINE L1 -1328 6714 6615 340 310 61 9 chr10 131280337 131280500 -9036265 - MIR SINE MIR -59 203 32 2232 103 0 0 chr10 131282504 131282804 -9033961 - AluSx SINE Alu -12 300 1 319 313 136 30 chr10 131284395 131284593 -9032172 + MIR SINE MIR 5 223 -39 212 265 0 0 chr10 131284690 131284739 -9032026 + L2 LINE L2 3224 3272 0 184 300 78 11 chr10 131284844 131284934 -9031831 - MIR SINE MIR -61 147 52 259 128 26 0 chr10 131285322 131285361 -9031404 + MLT1D LTR MaLR 356 395 -110 199 268 18 0 chr10 131286086 131286142 -9030623 - L2 LINE L2 -560 2754 2698 285 331 65 22 chr10 131286172 131286311 -9030454 - MIR SINE MIR -89 173 29 1503 224 110 18 chr10 131287323 131287779 -9028986 + MLT1D LTR MaLR 8 505 0 222 352 91 23 chr10 131288267 131288443 -9028322 + MIR SINE MIR 43 230 -32 212 250 0 0 chr10 131290553 131290601 -9026164 + (CAGA)n Simple_repeat Simple_repeat 3 50 0 2233 90 3 10 chr10 131292173 131292472 -9024293 + AluSx SINE Alu 1 297 -15 2435 99 3 0 chr10 131293413 131293725 -9023040 - AluSq SINE Alu 0 313 1 210 71 0 0 chr10 131295669 131295697 -9021068 + (CAT)n Simple_repeat Simple_repeat 3 30 0 483 221 34 20 chr10 131297363 131297512 -9019253 + MER113 DNA MER1_type? 6 156 -365 2171 249 88 16 chr10 131297512 131298441 -9018324 + L1ME3 LINE L1 5041 6020 -142 980 249 95 53 chr10 131299075 131299620 -9017145 + L1M4 LINE L1 4280 4847 -1299 1504 153 79 114 chr10 131299685 131299745 -9017020 - MLT1A1 LTR MaLR 0 365 304 2133 123 3 13 chr10 131299745 131300055 -9016710 - AluSx SINE Alu -5 307 1 1504 153 79 114 chr10 131300055 131300372 -9016393 - MLT1A1 LTR MaLR -61 304 1 2312 105 0 10 chr10 131301696 131302010 -9014755 - AluSx SINE Alu -1 311 1 566 203 61 47 chr10 131302417 131302632 -9014133 + MER58 DNA MER1_type 1 2420 0 624 250 110 26 chr10 131302674 131302902 -9013863 - MIR SINE MIR -4 258 12 364 173 111 40 chr10 131303082 131303206 -9013559 + L1ME LINE L1 5674 5819 -302 253 221 168 44 chr10 131303230 131303343 -9013422 - MLT1F LTR MaLR 0 542 416 457 269 109 13 chr10 131303463 131303619 -9013146 - MLT1H LTR MaLR -349 200 30 297 75 0 0 chr10 131304178 131304218 -9012547 + (T)n Simple_repeat Simple_repeat 1 40 0 360 0 0 0 chr10 131304400 131304440 -9012325 + (TG)n Simple_repeat Simple_repeat 2 41 0 486 295 67 36 chr10 131305251 131305475 -9011290 + MIR SINE MIR 32 262 0 214 156 22 22 chr10 131305520 131305565 -9011200 + (TAA)n Simple_repeat Simple_repeat 3 47 0 2488 63 0 0 chr10 131306457 131306744 -9010021 + AluY SINE Alu 17 303 -8 225 287 162 42 chr10 131306983 131307119 -9009646 + L2 LINE L2 2818 2936 -336 339 25 0 0 chr10 131307119 131307159 -9009606 + (TTCCC)n Simple_repeat Simple_repeat 4 43 0 225 287 162 42 chr10 131307159 131307238 -9009527 + L2 LINE L2 2936 3059 -213 713 232 134 7 chr10 131307277 131307553 -9009212 - LTR16A1 LTR ERVL 0 457 147 194 232 18 18 chr10 131307729 131307785 -9008980 + L2 LINE L2 3207 3262 -51 201 121 0 0 chr10 131307798 131307831 -9008934 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 222 275 17 0 chr10 131309281 131309360 -9007405 + MIR SINE MIR 84 163 -59 283 223 124 33 chr10 131309567 131309688 -9007077 - MIR3 SINE MIR -65 143 12 339 65 0 0 chr10 131310608 131310654 -9006111 + (TC)n Simple_repeat Simple_repeat 1 46 0 301 281 136 38 chr10 131310930 131311165 -9005600 - LTR16C LTR ERVL -1 490 233 185 340 182 10 chr10 131312976 131313179 -9003586 + L3 LINE CR1 1329 1566 -11 521 215 80 61 chr10 131313259 131313422 -9003343 + L1MD2 LINE L1 6065 6230 -129 821 114 30 23 chr10 131313440 131313572 -9003193 + MER20 DNA MER1_type 30 162 -57 236 111 22 0 chr10 131313587 131313632 -9003133 + (CA)n Simple_repeat Simple_repeat 1 46 0 491 250 24 0 chr10 131313668 131313792 -9002973 + L1MD2 LINE L1 6223 6349 -10 208 340 40 0 chr10 131315371 131315471 -9001294 + L2 LINE L2 3168 3271 -1 208 158 0 0 chr10 131315922 131315960 -9000805 + MIR SINE MIR 85 122 -140 1839 181 48 13 chr10 131317772 131318164 -8998601 + L1MB8 LINE L1 5772 6177 -1 25 0 0 0 chr10 131318583 131318608 -8998157 + AT_rich Low_complexity Low_complexity 1 25 0 235 235 0 0 chr10 131318704 131318755 -8998010 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 468 148 0 6 chr10 131318849 131318968 -8997797 + L1ME4a LINE L1 5309 5423 -760 1579 238 48 35 chr10 131319552 131320006 -8996759 + LTR40c LTR ERVL 1 460 -5 369 238 43 61 chr10 131320091 131320255 -8996510 + MER113 DNA MER1_type? 44 204 -317 2036 127 3 33 chr10 131320889 131321196 -8995569 + AluSx SINE Alu 1 298 -14 645 80 0 0 chr10 131321199 131321287 -8995478 + (TAGA)n Simple_repeat Simple_repeat 1 88 0 2465 61 7 0 chr10 131321945 131322240 -8994525 - AluY SINE Alu -14 297 1 326 240 70 0 chr10 131322569 131322669 -8994096 - L1ME4a LINE L1 -4 6117 6011 257 277 28 11 chr10 131322827 131323004 -8993761 + L1M4 LINE L1 2173 2352 -3794 207 220 0 20 chr10 131323337 131323387 -8993378 + CT-rich Low_complexity Low_complexity 2 50 0 254 274 0 27 chr10 131323710 131323783 -8992982 + G-rich Low_complexity Low_complexity 4 74 0 225 0 0 0 chr10 131325009 131325034 -8991731 + (TC)n Simple_repeat Simple_repeat 2 26 0 1951 146 16 7 chr10 131325039 131325347 -8991418 - AluJo SINE Alu 0 312 2 247 94 57 38 chr10 131325400 131325453 -8991312 + MIR SINE MIR 188 241 -21 213 169 68 34 chr10 131325609 131325668 -8991097 + MIR SINE MIR 114 174 -88 372 296 94 37 chr10 131325678 131326167 -8990598 + L1ME4a LINE L1 5425 5941 -180 23 65 0 16 chr10 131326580 131326608 -8990157 + AT_rich Low_complexity Low_complexity 1 28 -33 7392 39 8 1 chr10 131326608 131327777 -8988988 + L1PA6 LINE L1 4977 6151 -3 23 65 0 16 chr10 131327777 131327810 -8988955 + AT_rich Low_complexity Low_complexity 28 61 0 229 238 69 40 chr10 131327975 131328076 -8988689 + L1ME4a LINE L1 6014 6117 -4 351 0 0 0 chr10 131329356 131329395 -8987370 + (TG)n Simple_repeat Simple_repeat 2 40 0 208 165 73 18 chr10 131329399 131329508 -8987257 + (TA)n Simple_repeat Simple_repeat 1 115 0 320 256 118 31 chr10 131329632 131329827 -8986938 - L1ME LINE L1 -366 5755 5544 2769 103 120 0 chr10 131330823 131331240 -8985525 + LTR24 LTR ERV1 1 467 0 319 281 170 8 chr10 131333752 131333987 -8982778 + L1ME4a LINE L1 5835 6107 -14 204 48 71 24 chr10 131335298 131335340 -8981425 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2343 88 0 0 chr10 131335347 131335632 -8981133 - AluSg SINE Alu -24 286 2 182 206 0 0 chr10 131335850 131335884 -8980881 + MER5A DNA MER1_type 156 189 0 2627 94 59 15 chr10 131336022 131336428 -8980337 + MSTA LTR MaLR 3 426 -2 544 312 59 4 chr10 131336813 131337050 -8979715 - MIR SINE MIR 0 262 13 33 25 0 0 chr10 131337117 131337157 -8979608 + AT_rich Low_complexity Low_complexity 1 40 0 323 355 15 5 chr10 131337783 131337983 -8978782 - L2 LINE L2 -960 2354 2153 1932 143 0 17 chr10 131338216 131338510 -8978255 - AluJb SINE Alu -20 292 4 2174 254 81 13 chr10 131338598 131339547 -8977218 + L1MEc LINE L1 2179 3134 -3081 1092 219 96 30 chr10 131339648 131340140 -8976625 + L1M4 LINE L1 823 1346 -5196 390 23 0 0 chr10 131340213 131340257 -8976508 - THE1C LTR MaLR -331 44 1 273 29 0 0 chr10 131341387 131341421 -8975344 + (TG)n Simple_repeat Simple_repeat 1 34 0 996 140 0 0 chr10 131341460 131341603 -8975162 + FLAM_C SINE Alu 1 143 0 284 133 0 111 chr10 131341603 131341693 -8975072 - L1M LINE L1 -847 5333 5254 39 0 0 0 chr10 131341693 131341732 -8975033 + AT_rich Low_complexity Low_complexity 1 39 0 667 257 20 0 chr10 131341738 131341940 -8974825 - L1M4 LINE L1 -897 6209 6004 2535 217 27 6 chr10 131341959 131342808 -8973957 - L1M3d LINE L1 -5084 807 1 2629 230 47 56 chr10 131342810 131343823 -8972942 - L1M4 LINE L1 -2985 4121 3118 1879 232 19 41 chr10 131343826 131344157 -8972608 + MER74A LTR ERVL 6 322 -236 306 0 0 0 chr10 131344157 131344191 -8972574 + (CA)n Simple_repeat Simple_repeat 1 34 0 1879 232 19 41 chr10 131344191 131344424 -8972341 + MER74A LTR ERVL 322 558 0 984 234 50 16 chr10 131344424 131344979 -8971786 - L1M4 LINE L1 -3984 3124 2459 353 286 107 22 chr10 131345027 131345205 -8971560 - L1MC/D LINE L1 -2011 5797 5605 424 278 105 9 chr10 131345670 131345929 -8970836 - L1MC4a LINE L1 -297 5824 5600 1090 167 0 0 chr10 131346937 131347105 -8969660 - FAM SINE Alu -7 168 1 181 238 24 0 chr10 131347106 131347148 -8969617 + MER5A DNA MER1_type 125 167 -22 258 183 40 8 chr10 131347549 131347675 -8969090 + (TA)n Simple_repeat Simple_repeat 2 131 0 273 230 0 0 chr10 131347739 131347813 -8968952 + (TA)n Simple_repeat Simple_repeat 2 75 0 297 0 0 0 chr10 131347813 131347846 -8968919 + (CA)n Simple_repeat Simple_repeat 2 34 0 268 222 0 0 chr10 131349050 131349113 -8967652 - L1ME4a LINE L1 -213 5908 5846 350 304 23 60 chr10 131350868 131351085 -8965680 - L1MC4a LINE L1 -607 5557 5349 337 249 113 80 chr10 131352255 131352468 -8964297 + MIR SINE MIR 9 228 -34 2363 171 11 69 chr10 131352476 131353038 -8963727 - L1M4 LINE L1 -6501 529 1 399 255 7 26 chr10 131353051 131353204 -8963561 + L1MEc LINE L1 2141 2290 -4106 423 141 0 0 chr10 131353210 131353281 -8963484 + MLT2B3 LTR ERVL 1 71 -483 2310 164 9 93 chr10 131353378 131353902 -8962863 + MLT2B3 LTR ERVL 75 554 0 482 215 10 75 chr10 131353903 131353974 -8962791 + L1MEc LINE L1 2252 2326 -3889 1775 101 0 49 chr10 131353974 131354023 -8962742 - L1PA15 LINE L1 -1 6164 6114 2555 57 0 19 chr10 131354023 131354340 -8962425 - AluY SINE Alu 0 311 1 1775 101 0 49 chr10 131354340 131354576 -8962189 - L1PA15 LINE L1 -51 6114 5893 482 215 10 75 chr10 131354576 131354704 -8962061 + L1MEc LINE L1 2326 2438 -3777 2806 130 0 2 chr10 131354704 131355142 -8961623 + L1MB3 LINE L1 5743 6179 -4 1033 207 81 23 chr10 131355153 131355501 -8961264 + L1MC5 LINE L1 7481 7848 -113 751 246 140 3 chr10 131355602 131355980 -8960785 + L1ME3A LINE L1 5538 5967 -203 324 211 32 89 chr10 131356030 131356153 -8960612 + L1ME3A LINE L1 5962 6077 -93 353 261 109 24 chr10 131356671 131356836 -8959929 + L1ME4a LINE L1 5725 5903 -218 262 259 52 26 chr10 131357083 131357199 -8959566 - MIR SINE MIR -27 235 117 27 49 0 0 chr10 131357415 131357456 -8959309 + AT_rich Low_complexity Low_complexity 1 41 0 1763 186 16 19 chr10 131357537 131357914 -8958851 - MLT2D LTR ERVL 0 414 39 695 230 112 21 chr10 131358048 131358378 -8958387 + L1MEc LINE L1 2846 3205 -3010 354 167 14 111 chr10 131358346 131358490 -8958275 + L1M4 LINE L1 4546 4675 -1540 * 881 96 0 9 chr10 131358499 131358614 -8958151 + AluSq/x SINE Alu 1 114 -199 8564 138 40 11 chr10 131358614 131361262 -8955503 + L1MA2 LINE L1 3643 6373 0 300 281 96 27 chr10 131361292 131361438 -8955327 - L1ME3A LINE L1 -53 6117 5962 445 267 123 25 chr10 131361559 131361836 -8954929 - L1MC5 LINE L1 -453 7508 7205 240 226 0 0 chr10 131361972 131362034 -8954731 + (CATA)n Simple_repeat Simple_repeat 3 64 0 451 285 63 21 chr10 131362280 131362620 -8954145 - HERVL74-D LTR ERVL -167 5518 5071 41600 43 2 2 chr10 131362624 131368774 -8947991 + L1PA4 LINE L1 2 6152 -3 21 36 0 0 chr10 131368774 131368802 -8947963 + AT_rich Low_complexity Low_complexity 1 28 0 736 128 17 0 chr10 131368836 131368953 -8947812 + FLAM_C SINE Alu 6 124 -19 1248 214 4 0 chr10 131368959 131369225 -8947540 - L1 LINE L1 -1853 4293 4027 * 2770 217 12 36 chr10 131369223 131369823 -8946942 - L1M4 LINE L1 -813 5333 4755 1415 186 49 98 chr10 131369823 131370231 -8946534 + MLT1B LTR MaLR 3 390 0 2770 217 12 36 chr10 131370231 131370445 -8946320 - L1M4 LINE L1 -1391 4755 4538 334 179 0 48 chr10 131370450 131370534 -8946231 - MSTB1 LTR MaLR -352 80 1 2893 238 30 6 chr10 131370534 131371445 -8945320 - L1 LINE L1 -2175 3971 3039 18658 169 12 16 chr10 131371445 131374548 -8942217 - HERVL74-D LTR ERVL -1180 4505 1414 1757 163 25 0 chr10 131374548 131374825 -8941940 - AluJo SINE Alu -23 289 6 18658 169 12 16 chr10 131374825 131375063 -8941702 - HERVL74-D LTR ERVL -4271 1414 1177 1180 233 8 40 chr10 131375167 131375540 -8941225 - L1M4 LINE L1 -1519 5125 4765 473 205 15 17 chr10 131375585 131375808 -8940957 - L1M4 LINE L1 -4370 2276 1906 530 280 73 26 chr10 131375873 131376105 -8940660 - L1M4 LINE L1 -6287 255 13 432 316 21 31 chr10 131376507 131376700 -8940065 - MIR SINE MIR -71 191 1 496 306 73 74 chr10 131376717 131377295 -8939470 + L2 LINE L2 2157 2733 -581 293 140 0 0 chr10 131377678 131377728 -8939037 + L1MB3 LINE L1 6034 6083 -100 2879 158 17 6 chr10 131377728 131378209 -8938556 - MER66B LTR ERV1 0 486 1 12688 105 10 13 chr10 131378209 131380088 -8936677 - MER66B-int LTR ERV1 0 6676 4804 374 41 0 0 chr10 131380090 131380139 -8936626 + MLT2A1 LTR ERVL 396 444 0 * 2278 171 0 8 chr10 131380139 131380529 -8936236 - MER66B LTR ERV1 -95 391 5 627 96 0 0 chr10 131380530 131380624 -8936141 + L1MB3 LINE L1 6078 6171 -12 1002 216 7 38 chr10 131380725 131380905 -8935860 + L1MB8 LINE L1 5891 6060 -118 2102 88 3 11 chr10 131380905 131381188 -8935577 + AluSc SINE Alu 3 283 -26 1002 216 7 38 chr10 131381188 131381299 -8935466 + L1MB8 LINE L1 6060 6173 -5 1510 189 101 27 chr10 131381308 131381716 -8935049 - L1MD2 LINE L1 -55 6373 5936 677 282 34 63 chr10 131381719 131382070 -8934695 - L1MDa LINE L1 -6180 360 20 2401 85 0 7 chr10 131382193 131382499 -8934266 - AluSg SINE Alu -6 304 1 1252 237 30 56 chr10 131382577 131382923 -8933842 - L1MD2 LINE L1 -962 5253 4899 1476 207 41 0 chr10 131382923 131383194 -8933571 + AluJo SINE Alu 1 282 -30 1252 237 30 56 chr10 131383194 131383625 -8933140 - L1MD2 LINE L1 -1316 4899 4458 1214 213 116 35 chr10 131383625 131384057 -8932708 + MLT1C LTR MaLR 1 467 0 1252 237 30 56 chr10 131384057 131384894 -8931871 - L1MD2 LINE L1 -1757 4458 3566 1938 251 70 22 chr10 131384899 131385723 -8931042 - L1MD2 LINE L1 -3081 3134 2271 1090 70 0 26 chr10 131385733 131385889 -8930876 - L1PA7 LINE L1 -2 6152 6001 1875 38 0 0 chr10 131385889 131386118 -8930647 + L1PA6 LINE L1 5671 5902 -252 1272 198 117 0 chr10 131386134 131386492 -8930273 - L1MD2 LINE L1 -4070 2326 1927 711 235 9 33 chr10 131386539 131386752 -8930013 - L1MD2 LINE L1 -6173 223 16 216 292 0 0 chr10 131387102 131387150 -8929615 - L2 LINE L2 0 3313 3266 1118 186 127 16 chr10 131388025 131388332 -8928433 - MER58B DNA MER1_type 0 341 1 183 283 150 0 chr10 131389083 131389143 -8927622 - MIR SINE MIR -65 197 129 426 85 0 0 chr10 131389375 131389434 -8927331 + (TA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 0 chr10 131390871 131390892 -8925873 + GC_rich Low_complexity Low_complexity 1 21 0 321 239 42 84 chr10 131391844 131392011 -8924754 + L1M4 LINE L1 4154 4313 -1833 2620 246 42 17 chr10 131392012 131393500 -8923265 + L1ME2 LINE L1 4631 6155 -9 868 258 48 89 chr10 131393513 131393772 -8922993 + L1M4 LINE L1 4404 4672 -1474 2183 117 0 0 chr10 131393772 131394072 -8922693 + AluSg SINE Alu 1 300 -10 868 258 48 89 chr10 131394072 131394602 -8922163 + L1M4 LINE L1 4672 5161 -985 936 124 21 14 chr10 131394627 131394772 -8921993 + AluSq/x SINE Alu 1 146 -166 4040 158 89 6 chr10 131395323 131395671 -8921094 - L1MC1 LINE L1 0 6613 6295 1871 93 45 14 chr10 131395671 131395962 -8920803 - L1MA1 LINE L1 -7 6295 5996 4040 158 89 6 chr10 131395962 131396480 -8920285 - L1MC1 LINE L1 -318 6295 5675 979 81 0 0 chr10 131396484 131396608 -8920157 - AluSg/x SINE Alu -12 300 177 5978 237 32 17 chr10 131396610 131398472 -8918293 - L1MC1 LINE L1 -755 5671 3782 1048 181 58 0 chr10 131398472 131398677 -8918088 - MSTB LTR MaLR 0 426 210 266 197 0 26 chr10 131398698 131398774 -8917991 + (TA)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr10 131398799 131398821 -8917944 + AT_rich Low_complexity Low_complexity 1 22 0 3388 226 50 19 chr10 131398824 131399940 -8916825 - L1MC1 LINE L1 -2730 3696 2546 287 133 0 0 chr10 131399953 131399998 -8916767 - MLT1B LTR MaLR 0 390 346 462 198 45 36 chr10 131399998 131400109 -8916656 - L1MC1 LINE L1 -5831 595 484 1115 224 47 23 chr10 131400264 131400337 -8916428 - MLT1E LTR MaLR -3 590 520 5253 75 21 34 chr10 131400337 131401113 -8915652 - MER4E LTR ERV1 0 766 1 1115 224 47 23 chr10 131401113 131401338 -8915427 - MLT1E LTR MaLR -73 520 285 190 382 29 0 chr10 131402780 131402882 -8913883 - L2 LINE L2 -2493 821 717 2608 56 0 0 chr10 131403651 131403955 -8912810 - AluY SINE Alu -7 304 1 666 134 0 10 chr10 131404055 131404248 -8912517 - L1PA16 LINE L1 -1 6165 5940 961 196 34 5 chr10 131404416 131404625 -8912140 - L1PA16 LINE L1 0 6166 5952 2607 173 15 2 chr10 131404929 131405386 -8911379 + MLT1C LTR MaLR 2 464 -3 357 279 27 0 chr10 131405470 131405581 -8911184 + LTR67 LTR ERVL 425 538 -19 387 329 12 0 chr10 131405745 131405915 -8910850 + L1ME LINE L1 5482 5653 -468 249 133 0 60 chr10 131405940 131406023 -8910742 + (TA)n Simple_repeat Simple_repeat 2 79 0 345 311 105 7 chr10 131406363 131406520 -8910245 + MIR SINE MIR 2 179 -29 1734 171 27 9 chr10 131406626 131406959 -8909806 - L1MC1 LINE L1 0 6333 5995 306 118 0 0 chr10 131407392 131407443 -8909322 + L1MA5A LINE L1 6169 6219 -78 2077 90 4 0 chr10 131407443 131407709 -8909056 - AluSc SINE Alu -40 269 3 24 67 0 0 chr10 131407711 131407756 -8909009 + AT_rich Low_complexity Low_complexity 1 45 0 2363 91 13 0 chr10 131407857 131408166 -8908599 - AluSp SINE Alu 0 313 1 394 211 39 10 chr10 131408179 131408283 -8908482 + MER21B LTR ERV1 1 107 -756 322 219 27 14 chr10 131408280 131408353 -8908412 + MER21B LTR ERV1 19 92 -771 * 3210 226 37 19 chr10 131408353 131409133 -8907632 + MER21B LTR ERV1 43 836 -27 301 254 67 42 chr10 131409359 131409524 -8907241 - L1ME LINE L1 -682 5482 5314 320 83 67 0 chr10 131409922 131409982 -8906783 - L1MA7 LINE L1 -5 6286 6223 1123 155 7 15 chr10 131410002 131410041 -8906724 - L1MA7 LINE L1 -15 6288 6250 2544 68 3 0 chr10 131410041 131410349 -8906416 - AluY SINE Alu 0 311 3 1123 155 7 15 chr10 131410349 131410560 -8906205 - L1MA7 LINE L1 -53 6250 6025 268 281 0 0 chr10 131410560 131410624 -8906141 - L2 LINE L2 -16 3297 3234 339 286 71 9 chr10 131410642 131410754 -8906011 + MIR SINE MIR 73 191 -71 182 355 65 19 chr10 131411316 131411423 -8905342 - L2 LINE L2 -215 3057 2946 600 290 102 66 chr10 131412061 131412561 -8904204 + MLT2F LTR ERVL 1 518 -145 263 213 213 0 chr10 131418638 131418718 -8898047 + MLT2F LTR ERVL 567 663 0 736 237 55 36 chr10 131418925 131419144 -8897621 - MER58A DNA MER1_type 0 224 2 197 262 19 0 chr10 131419215 131419274 -8897491 + MIR SINE MIR 14 75 -133 982 279 139 55 chr10 131419326 131419843 -8896922 + MLT1G1 LTR MaLR 8 595 0 301 326 97 27 chr10 131420824 131421018 -8895747 + MIR SINE MIR 16 223 -39 301 379 35 24 chr10 131421087 131421256 -8895509 + L2 LINE L2 2993 3163 -109 391 333 28 14 chr10 131421803 131421947 -8894818 - MIR SINE MIR -1 261 116 1728 158 21 63 chr10 131422669 131422832 -8893933 - MLT1A1 LTR MaLR 0 365 197 1583 152 93 39 chr10 131422832 131423188 -8893577 + THE1C LTR MaLR 1 375 0 1728 158 21 63 chr10 131423188 131423405 -8893360 - MLT1A1 LTR MaLR -168 197 1 190 396 85 18 chr10 131423934 131424098 -8892667 + MIR SINE MIR 14 188 -74 1810 258 94 26 chr10 131424143 131425179 -8891586 + L1M4 LINE L1 3144 4249 -1897 210 146 0 49 chr10 131425391 131425432 -8891333 - L2 LINE L2 -88 3225 3187 1688 220 54 35 chr10 131425718 131426237 -8890528 - MER65-int LTR ERV1 -3933 938 410 22373 154 32 31 chr10 131426249 131429306 -8887459 + L1PA10 LINE L1 203 3255 -3228 2480 68 0 10 chr10 131429306 131429613 -8887152 + AluY SINE Alu 1 304 -7 22373 154 32 31 chr10 131429613 131432755 -8884010 + L1PA10 LINE L1 3255 6478 -5 7361 220 15 21 chr10 131432767 131434793 -8881972 + L1PA16 LINE L1 2176 4188 -1958 10226 36 1 153 chr10 131434799 131436430 -8880335 + SVA Other Other 1 1382 -4 201 139 0 0 chr10 131436461 131436504 -8880261 + (A)n Simple_repeat Simple_repeat 1 43 0 5010 147 27 6 chr10 131436620 131438218 -8878547 + L1PA16 LINE L1 4178 5839 -327 1937 61 8 4 chr10 131438218 131438465 -8878300 + AluY SINE Alu 60 307 -4 5010 147 27 6 chr10 131438465 131438801 -8877964 + L1PA16 LINE L1 5839 6166 0 1821 214 112 86 chr10 131438866 131439970 -8876795 + LTR49-int LTR ERV1 3960 5092 -1239 641 235 95 95 chr10 131640177 131640555 -8676210 - MLT1H LTR MaLR -53 496 119 267 299 150 12 chr10 131640855 131641022 -8675743 + MIR SINE MIR 1 190 -72 2156 87 27 10 chr10 131642772 131643070 -8673695 + AluSc SINE Alu 1 303 -6 1617 161 72 10 chr10 131643110 131643401 -8673364 - AluJb SINE Alu -3 309 1 256 226 0 0 chr10 131643401 131643468 -8673297 + MIR SINE MIR 58 125 -83 197 288 30 0 chr10 131643487 131643553 -8673212 + MIR SINE MIR 86 153 -55 423 198 72 0 chr10 131643555 131643666 -8673099 + L1ME3A LINE L1 5318 5436 -730 2183 119 0 44 chr10 131643668 131643988 -8672777 + AluSg SINE Alu 1 306 -4 627 284 133 15 chr10 131643989 131644049 -8672716 + L1ME3A LINE L1 5577 5629 -541 2092 109 40 10 chr10 131644049 131644353 -8672412 - AluSq SINE Alu 0 313 1 627 284 133 15 chr10 131644353 131644616 -8672149 + L1ME3A LINE L1 5629 5938 -232 222 250 40 13 chr10 131646247 131646323 -8670442 + L2 LINE L2 3193 3270 -2 415 121 61 0 chr10 131647269 131647335 -8669430 + AluS SINE Alu 32 101 -211 1463 85 5 5 chr10 131647406 131647595 -8669170 + AluSg/x SINE Alu 113 301 -11 812 194 24 0 chr10 131647595 131647765 -8669000 + L1M4 LINE L1 4751 4924 -1222 2000 124 112 47 chr10 131647845 131648247 -8668518 + MSTA LTR MaLR 1 428 0 1347 220 90 9 chr10 131648441 131648787 -8667978 - MLT1A2 LTR MaLR 0 374 1 2336 111 0 0 chr10 131648892 131649190 -8667575 - AluSx SINE Alu -10 302 5 2193 105 55 6 chr10 131649666 131650027 -8666738 - Tigger2 DNA MER2_type -67 2651 2273 1572 42 0 0 chr10 131650292 131650483 -8666282 - L1PA8 LINE L1 -13 6159 5969 2077 122 28 0 chr10 131650621 131650907 -8665858 + AluSx SINE Alu 1 294 -18 189 0 0 0 chr10 131651501 131651522 -8665243 + (TG)n Simple_repeat Simple_repeat 2 22 0 1194 127 17 12 chr10 131652128 131652301 -8664464 - AluSx SINE Alu -138 174 1 1007 141 42 5 chr10 131652355 131652546 -8664219 + L1M4 LINE L1 5270 5467 -711 1735 133 84 28 chr10 131652548 131652833 -8663932 - AluJb SINE Alu -11 301 1 350 165 94 0 chr10 131652841 131652926 -8663839 - FLAM SINE Alu 0 133 41 1948 142 0 7 chr10 131652941 131653216 -8663549 - AluSx SINE Alu -39 273 1 2403 97 0 7 chr10 131653218 131653527 -8663238 - AluSx SINE Alu -5 307 1 201 244 0 0 chr10 131655472 131655513 -8661252 + (CA)n Simple_repeat Simple_repeat 1 41 0 529 226 29 72 chr10 131655549 131655639 -8661126 + MIR SINE MIR 61 153 -109 2327 112 3 0 chr10 131655639 131655943 -8660822 + AluSq SINE Alu 1 305 -8 529 226 29 72 chr10 131655943 131656060 -8660705 + MIR SINE MIR 153 259 -3 2250 109 3 6 chr10 131656155 131656466 -8660299 + AluSg SINE Alu 1 310 0 522 268 101 10 chr10 131657844 131658042 -8658723 + MIR SINE MIR 45 260 -2 240 317 139 34 chr10 131658126 131658334 -8658431 + L2 LINE L2 3029 3258 -55 2396 39 0 13 chr10 131659061 131659372 -8657393 - L1PA5 LINE L1 0 6154 5848 911 180 6 6 chr10 131659629 131659796 -8656969 + FRAM SINE Alu 1 167 -9 2092 111 11 0 chr10 131659800 131660105 -8656660 + AluSx SINE Alu 1 308 0 304 258 19 13 chr10 131660849 131660954 -8655811 - MIR SINE MIR -67 141 55 243 215 46 0 chr10 131661809 131661874 -8654891 + MIR SINE MIR 87 154 -108 319 273 39 26 chr10 131664575 131664729 -8652036 - MIR SINE MIR -34 228 73 1082 241 85 17 chr10 131665463 131665814 -8650951 - MLT1D LTR MaLR 0 505 131 870 240 115 46 chr10 131665814 131665921 -8650844 - MER87 LTR ERV1 0 541 443 2796 135 103 0 chr10 131665921 131666395 -8650370 - MER1A DNA MER1_type -4 523 1 870 240 115 46 chr10 131666395 131666591 -8650174 - MER87 LTR ERV1 -98 443 217 391 225 202 23 chr10 131668088 131668261 -8648504 - MLT1J2 LTR MaLR -3 447 244 180 125 0 0 chr10 131669407 131669439 -8647326 + (A)n Simple_repeat Simple_repeat 1 32 0 1227 99 6 44 chr10 131670098 131670279 -8646486 - AluSg SINE Alu -136 174 1 1743 141 54 30 chr10 131670328 131670625 -8646140 + AluSx SINE Alu 1 304 -8 2002 139 3 31 chr10 131670702 131671019 -8645746 - AluJo SINE Alu -4 308 1 216 305 184 14 chr10 131671231 131671372 -8645393 + MIR SINE MIR 5 169 -39 1590 182 34 0 chr10 131671587 131671851 -8644914 + AluJb SINE Alu 2 274 -38 516 32 0 0 chr10 131671853 131671915 -8644850 + (GAGAA)n Simple_repeat Simple_repeat 3 64 0 2290 109 3 3 chr10 131672425 131672738 -8644027 - AluSp SINE Alu 0 313 1 1559 140 91 0 chr10 131673012 131673255 -8643510 - AluSg SINE Alu -45 265 1 507 261 236 1 chr10 131673289 131673498 -8643267 - L1MC4a LINE L1 -413 5757 5598 192 205 0 0 chr10 131673542 131673581 -8643184 + MER5C DNA MER1_type 3 41 -283 206 145 130 14 chr10 131673661 131673730 -8643035 + MER5C DNA MER1_type 208 284 -40 1579 176 7 49 chr10 131673734 131674040 -8642725 - AluJo SINE Alu -19 293 1 1866 137 44 0 chr10 131674097 131674403 -8642362 + AluSq SINE Alu 3 320 0 567 200 0 0 chr10 131674460 131674560 -8642205 - FLAM_A SINE Alu -42 100 1 2141 122 0 3 chr10 131675091 131675379 -8641386 - AluSx SINE Alu -24 288 2 2084 131 17 3 chr10 131675547 131675838 -8640927 + AluSx SINE Alu 1 295 -17 2354 95 10 0 chr10 131675838 131676144 -8640621 + AluSc SINE Alu 1 309 0 1741 141 35 16 chr10 131676147 131676466 -8640299 + L1MA4 LINE L1 5727 6051 -249 2079 128 3 31 chr10 131676467 131676788 -8639977 + AluJb SINE Alu 1 312 0 918 316 49 41 chr10 131677283 131677960 -8638805 + HAL1 LINE L1 1087 1768 -739 1109 201 0 9 chr10 131678203 131678422 -8638343 + AluJo SINE Alu 96 312 0 1999 226 91 17 chr10 131678926 131679529 -8637236 - MER114 LTR ERV 0 648 1 1382 160 0 31 chr10 131679552 131679777 -8636988 - AluJo SINE Alu -94 218 1 809 269 25 49 chr10 131679995 131680240 -8636525 - MLT1F1 LTR MaLR -2 565 327 2056 148 17 0 chr10 131680286 131680631 -8636134 - MLT1B LTR MaLR 0 390 40 488 230 171 72 chr10 131680641 131680876 -8635889 - MLT1F1 LTR MaLR -286 268 3 303 222 6 23 chr10 131681189 131681360 -8635405 + (CA)n Simple_repeat Simple_repeat 2 169 0 483 331 53 47 chr10 131682343 131682663 -8634102 + L2 LINE L2 2915 3236 -36 1876 150 33 13 chr10 131684273 131684579 -8632186 + AluJb SINE Alu 1 312 0 1156 191 16 0 chr10 131684630 131684876 -8631889 - L1MB7 LINE L1 -354 5830 5581 508 232 99 70 chr10 131684879 131685151 -8631614 + MLT1K LTR MaLR 282 561 -27 225 0 0 0 chr10 131687298 131687323 -8629442 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 1524 237 108 10 chr10 131687635 131688053 -8628712 + MLT1C LTR MaLR 9 467 0 834 324 100 27 chr10 131688184 131688594 -8628171 + L1MEd LINE L1 207 646 -5473 785 273 165 38 chr10 131688617 131688813 -8627952 + L1MEd LINE L1 807 977 -5333 387 0 0 0 chr10 131688813 131688856 -8627909 + (TG)n Simple_repeat Simple_repeat 1 43 0 785 273 165 38 chr10 131688856 131689328 -8627437 + L1MEd LINE L1 977 1568 -4742 745 326 40 50 chr10 131689302 131689878 -8626887 + L1ME4a LINE L1 17 586 -5810 * 689 300 39 17 chr10 131689910 131690267 -8626498 + L1ME4a LINE L1 579 943 -5453 * 2506 259 35 11 chr10 131690264 131691109 -8625656 + L1ME4a LINE L1 3106 3971 -2244 2046 167 10 37 chr10 131691109 131691279 -8625486 + MLT1B LTR MaLR 1 174 -216 2322 133 11 11 chr10 131691279 131691654 -8625111 - THE1C LTR MaLR 0 375 1 2046 167 10 37 chr10 131691654 131691675 -8625090 + MLT1B LTR MaLR 174 194 -196 1140 175 111 44 chr10 131691675 131691886 -8624879 - MLT1A1 LTR MaLR 0 365 121 1959 161 20 0 chr10 131691886 131692190 -8624575 - AluJo SINE Alu -2 310 1 1140 175 111 44 chr10 131692190 131692320 -8624445 - MLT1A1 LTR MaLR -244 121 1 2046 167 10 37 chr10 131692320 131692528 -8624237 + MLT1B LTR MaLR 194 390 0 1699 236 26 29 chr10 131692539 131693125 -8623640 + L1ME4a LINE L1 3978 4561 -1654 981 76 0 111 chr10 131693127 131693299 -8623466 + MSTB1 LTR MaLR 30 182 -250 462 225 22 44 chr10 131693308 131693423 -8623342 + L1ME4a LINE L1 4568 4679 -1536 2000 101 10 29 chr10 131693423 131693731 -8623034 - AluSc SINE Alu -7 302 1 462 225 22 44 chr10 131693731 131693797 -8622968 + L1ME4a LINE L1 4679 4745 -1470 374 247 54 97 chr10 131694538 131694691 -8622074 + L1ME4a LINE L1 5853 6011 -179 2582 102 17 7 chr10 131694691 131694880 -8621885 + L1MA1 LINE L1 5879 6065 -237 2517 84 0 0 chr10 131694880 131695191 -8621574 + AluSx SINE Alu 1 311 -1 2582 102 17 7 chr10 131695191 131695421 -8621344 + L1MA1 LINE L1 6065 6302 0 374 247 54 97 chr10 131695421 131695619 -8621146 + L1ME4a LINE L1 6011 6189 -1 790 249 113 54 chr10 131695767 131696176 -8620589 + MLT1K LTR MaLR 123 555 -33 709 212 73 6 chr10 131696463 131696642 -8620123 + MIR SINE MIR 40 230 -32 289 295 70 33 chr10 131697199 131697443 -8619322 + L1M4 LINE L1 2936 3188 -2958 2033 115 3 61 chr10 131697510 131697823 -8618942 - AluSx SINE Alu -17 295 1 275 273 26 45 chr10 131697847 131698001 -8618764 + L1M4 LINE L1 3336 3486 -2660 258 378 18 4 chr10 131697999 131698224 -8618541 + L1M4 LINE L1 4235 4462 -1684 * 311 285 39 39 chr10 131698340 131698470 -8618295 + L1M4 LINE L1 4578 4707 -1439 1792 176 21 0 chr10 131699107 131699397 -8617368 + AluJb SINE Alu 1 296 -16 961 189 0 0 chr10 131699397 131699569 -8617196 + AluJb SINE Alu 137 308 0 694 194 8 0 chr10 131699576 131699700 -8617065 + FLAM_C SINE Alu 3 127 -16 188 155 12 60 chr10 131699875 131699900 -8616865 + (TATAA)n Simple_repeat Simple_repeat 5 30 -54 2665 109 48 10 chr10 131699900 131700312 -8616453 + MSTA LTR MaLR 1 428 0 188 155 12 60 chr10 131700312 131700370 -8616395 + (TATAA)n Simple_repeat Simple_repeat 30 84 0 2313 107 3 19 chr10 131700441 131700759 -8616006 + AluSq SINE Alu 1 313 0 1611 173 0 40 chr10 131700780 131701109 -8615656 - AluJo SINE Alu 0 312 1 677 279 5 9 chr10 131701276 131701498 -8615267 + AluSg/x SINE Alu 82 302 -10 320 323 82 20 chr10 131701589 131701892 -8614873 + L1P4 LINE L1 5255 5576 -589 844 156 0 0 chr10 131702116 131702238 -8614527 - FLAM_C SINE Alu -19 124 3 2107 70 44 7 chr10 131702240 131702533 -8614232 - AluSg SINE Alu 0 303 1 264 323 12 12 chr10 131702549 131702716 -8614049 + L1ME3A LINE L1 5781 5947 -223 234 299 26 0 chr10 131703895 131703972 -8612793 + GA-rich Low_complexity Low_complexity 3 81 0 767 274 75 12 chr10 131704894 131705135 -8611630 + L2 LINE L2 2077 2332 -982 1176 60 0 0 chr10 131705137 131705288 -8611477 + L1PA7 LINE L1 6000 6150 -4 382 119 0 14 chr10 131705290 131705359 -8611406 + MLT1H LTR MaLR 481 548 0 * 1711 233 70 101 chr10 131705359 131705960 -8610805 - MLT1G LTR MaLR -13 577 1 506 269 141 0 chr10 131705966 131706122 -8610643 - MIR SINE MIR -70 192 15 2030 96 0 36 chr10 131706554 131706834 -8609931 + AluSx SINE Alu 5 274 -38 216 86 0 0 chr10 131706834 131706869 -8609896 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 414 85 0 0 chr10 131706984 131707043 -8609722 + (CA)n Simple_repeat Simple_repeat 2 60 0 362 243 127 11 chr10 131707043 131707155 -8609610 + L1MC4 LINE L1 1965 6983 -1339 299 264 35 0 chr10 131707507 131707594 -8609171 - MER53 DNA DNA -1 188 99 * 316 225 25 0 chr10 131707518 131707598 -8609167 + MER53 DNA DNA 23 104 -85 1636 215 94 133 chr10 131707598 131707893 -8608872 - L1ME3A LINE L1 -37 6133 5828 498 85 11 43 chr10 131707893 131707987 -8608778 + MER53 DNA DNA 96 186 -3 1636 215 94 133 chr10 131707987 131708437 -8608328 - L1ME3A LINE L1 -342 5828 5331 534 219 57 0 chr10 131708437 131708560 -8608205 - FLAM_A SINE Alu -2 131 2 1636 215 94 133 chr10 131708560 131708670 -8608095 - L1ME3A LINE L1 -839 5331 5218 2332 123 13 8 chr10 131709597 131709970 -8606795 - THE1C LTR MaLR 0 375 1 31 26 0 0 chr10 131710237 131710275 -8606490 + AT_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr10 131710787 131710821 -8605944 + GC_rich Low_complexity Low_complexity 1 34 0 1430 189 57 11 chr10 131713765 131714045 -8602720 - AluJb SINE Alu -19 293 1 718 172 8 0 chr10 131714055 131714183 -8602582 - FLAM_C SINE Alu -2 141 13 2105 116 18 7 chr10 131714230 131714515 -8602250 - AluSx SINE Alu -19 293 6 1241 209 87 83 chr10 131714881 131714918 -8601847 - L1MC4 LINE L1 -1 8041 8006 2121 98 0 0 chr10 131714918 131715209 -8601556 + AluSg SINE Alu 17 307 0 1241 209 87 83 chr10 131715209 131715242 -8601523 - L1MC4 LINE L1 -36 8006 7975 2189 102 0 3 chr10 131715242 131715554 -8601211 + AluSg SINE Alu 1 311 0 1241 209 87 83 chr10 131715554 131715939 -8600826 - L1MC4 LINE L1 -67 7975 7581 316 183 56 0 chr10 131715949 131716020 -8600745 - L1MC4a LINE L1 -569 7239 7165 1882 146 17 10 chr10 131716020 131716187 -8600578 - AluJo SINE Alu -12 300 129 2329 93 0 7 chr10 131716187 131716487 -8600278 - AluSq SINE Alu -15 298 1 1882 146 17 10 chr10 131716487 131716614 -8600151 - AluJo SINE Alu -183 129 4 1806 164 14 14 chr10 131716930 131717223 -8599542 + AluJb SINE Alu 1 293 -19 314 203 31 0 chr10 131717448 131717512 -8599253 + L2 LINE L2 2741 2806 -508 550 234 34 17 chr10 131717637 131717812 -8598953 - MER45A DNA AcHobo 0 178 1 219 265 65 0 chr10 131717865 131717981 -8598784 - MIR SINE MIR -73 135 9 332 225 0 42 chr10 131717981 131718123 -8598642 + CT-rich Low_complexity Low_complexity 2 137 0 646 111 0 0 chr10 131719288 131719378 -8597387 - FLAM_C SINE Alu -40 103 14 254 280 86 27 chr10 131719408 131719596 -8597169 - MIR SINE MIR -27 235 32 189 242 45 15 chr10 131719650 131719716 -8597049 + MIR3 SINE MIR 12 79 -129 2258 169 45 24 chr10 131719827 131719893 -8596872 + MLT1D LTR MaLR 2 65 -440 2638 96 3 3 chr10 131719893 131720256 -8596509 + THE1B LTR MaLR 2 364 0 2258 169 45 24 chr10 131720256 131720681 -8596084 + MLT1D LTR MaLR 65 503 -2 422 209 73 9 chr10 131721914 131722024 -8594741 - LTR16C LTR ERVL 0 491 375 396 147 78 29 chr10 131722030 131722132 -8594633 + MLT1C LTR MaLR 7 113 -354 1877 80 11 4 chr10 131722136 131722398 -8594367 + THE1B LTR MaLR 1 264 -100 531 71 106 12 chr10 131722530 131722615 -8594150 + THE1B LTR MaLR 268 360 -4 * 538 216 45 106 chr10 131722613 131722858 -8593907 + MLT1C LTR MaLR 83 312 -155 991 269 82 80 chr10 131722978 131723525 -8593240 + LTR67 LTR ERVL 5 552 -5 201 297 143 11 chr10 131723687 131723778 -8592987 + MIR SINE MIR 13 115 -147 707 303 70 7 chr10 131724475 131724775 -8591990 - L1ME4a LINE L1 -215 5906 5588 402 281 168 0 chr10 131724873 131725040 -8591725 - MIR SINE MIR -8 254 60 2407 88 7 3 chr10 131726473 131726780 -8589985 + AluSq SINE Alu 1 308 -5 186 203 85 0 chr10 131728070 131728129 -8588636 + L2 LINE L2 3151 3214 -58 238 336 28 9 chr10 131728144 131728251 -8588514 + MIR SINE MIR 117 225 -37 722 177 0 8 chr10 131728446 131728576 -8588189 + FLAM_A SINE Alu 13 141 -1 408 40 0 0 chr10 131728578 131728628 -8588137 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 246 210 74 0 chr10 131729195 131729276 -8587489 + L1ME4a LINE L1 6022 6108 -13 278 292 11 39 chr10 131730431 131730609 -8586156 + C-rich Low_complexity Low_complexity 2 174 0 253 294 18 24 chr10 131730620 131730790 -8585975 + CT-rich Low_complexity Low_complexity 5 173 0 317 242 0 77 chr10 131730858 131731052 -8585713 + CT-rich Low_complexity Low_complexity 1 179 0 229 304 0 0 chr10 131732296 131732352 -8584413 - MER5A DNA MER1_type 0 189 134 1292 182 45 105 chr10 131732360 131732490 -8584275 + AluJo SINE Alu 1 137 -175 2310 112 0 7 chr10 131732490 131732794 -8583971 + AluSx SINE Alu 1 302 -10 2416 81 3 7 chr10 131732794 131733101 -8583664 - AluY SINE Alu -5 306 1 1292 182 45 105 chr10 131733101 131733282 -8583483 + AluJo SINE Alu 135 294 -18 2407 91 3 10 chr10 131733517 131733826 -8582939 + AluSq SINE Alu 1 307 -6 700 154 0 62 chr10 131734222 131734352 -8582413 - AluJ SINE Alu -8 304 183 1149 151 6 17 chr10 131734417 131734596 -8582169 - AluJ SINE Alu -126 186 10 410 173 112 0 chr10 131735892 131736007 -8580758 + MIR SINE MIR 64 192 -62 228 240 40 50 chr10 131737954 131738054 -8578711 - MIR SINE MIR -118 144 46 799 217 75 80 chr10 131738160 131738479 -8578286 + MER39 LTR ERV1 1 320 -387 2370 87 0 0 chr10 131738479 131738766 -8577999 + AluSq SINE Alu 1 287 -26 225 0 0 0 chr10 131738766 131738791 -8577974 + (CA)n Simple_repeat Simple_repeat 2 26 0 799 217 75 80 chr10 131738791 131738886 -8577879 + MER39 LTR ERV1 318 629 -78 218 246 0 14 chr10 131739706 131739775 -8576990 + C-rich Low_complexity Low_complexity 6 73 0 669 146 68 9 chr10 131740282 131740484 -8576281 + MER7A DNA MER2_type 47 336 0 188 244 192 13 chr10 131740491 131740569 -8576196 - MIR3 SINE MIR -50 158 67 298 241 305 0 chr10 131741608 131741749 -8575016 + MIR SINE MIR 76 259 -3 483 241 37 56 chr10 131741933 131742035 -8574730 - MER5B DNA MER1_type -17 161 62 2190 131 0 0 chr10 131742035 131742332 -8574433 - AluSq SINE Alu -16 297 1 483 241 37 56 chr10 131742332 131742391 -8574374 - MER5B DNA MER1_type -116 62 3 217 356 54 27 chr10 131742469 131742618 -8574147 + MIR3 SINE MIR 21 173 -35 831 242 112 24 chr10 131742790 131743166 -8573599 + LTR56 LTR ERV1 9 417 -28 2269 244 90 24 chr10 131743167 131744096 -8572669 - LTR28 LTR ERV1 -6 1014 1 287 301 53 38 chr10 131744298 131744431 -8572334 - MIR SINE MIR -9 253 119 2334 105 3 3 chr10 131744648 131744954 -8571811 - AluSp SINE Alu -7 306 1 1647 198 7 7 chr10 131745304 131745597 -8571168 + AluJb SINE Alu 1 293 -19 207 117 416 0 chr10 131745625 131745702 -8571063 - MER5B DNA MER1_type -4 174 66 234 91 0 0 chr10 131746065 131746098 -8570667 + (A)n Simple_repeat Simple_repeat 1 33 0 2377 119 0 0 chr10 131746279 131746590 -8570175 + AluSx SINE Alu 2 312 0 2491 74 0 0 chr10 131746638 131746934 -8569831 + AluY SINE Alu 1 296 -15 2072 146 0 0 chr10 131747029 131747323 -8569442 + AluSx SINE Alu 1 294 -18 742 189 161 59 chr10 131747324 131747702 -8569063 + LTR56 LTR ERV1 45 445 0 2326 82 7 0 chr10 131748645 131748936 -8567829 + AluSc SINE Alu 1 293 -16 2178 104 0 58 chr10 131749151 131749478 -8567287 + AluSc SINE Alu 1 308 -1 609 190 56 101 chr10 131749610 131749752 -8567013 + MER5B DNA MER1_type 1 135 -43 2560 77 0 0 chr10 131749752 131750062 -8566703 - AluY SINE Alu -1 310 1 609 190 56 101 chr10 131750062 131750098 -8566667 + MER5B DNA MER1_type 135 171 -7 2257 113 0 0 chr10 131750585 131750885 -8565880 + AluSc SINE Alu 1 300 -9 2130 110 10 3 chr10 131750889 131751181 -8565584 + AluSg SINE Alu 1 294 -16 1856 136 18 0 chr10 131752323 131752466 -8564299 - AluSx SINE Alu -34 278 126 198 0 0 0 chr10 131752466 131752488 -8564277 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1856 136 18 0 chr10 131752488 131752617 -8564148 - AluSx SINE Alu -186 126 1 1382 165 56 34 chr10 131754547 131754673 -8562092 - AluJo SINE Alu -40 272 150 2245 94 3 60 chr10 131754673 131755004 -8561761 - AluSx SINE Alu 0 312 1 1382 165 56 34 chr10 131755004 131755143 -8561622 - AluJo SINE Alu -162 150 1 1997 157 0 0 chr10 131755179 131755472 -8561293 + AluSx SINE Alu 1 293 -19 310 252 29 154 chr10 131756561 131756627 -8560138 - L2 LINE L2 -1 3312 3239 2084 130 7 0 chr10 131756627 131756940 -8559825 + AluSx SINE Alu 1 315 0 310 252 29 154 chr10 131756940 131756952 -8559813 - L2 LINE L2 -74 3239 3227 2154 93 48 0 chr10 131756952 131757241 -8559524 + AluSq SINE Alu 1 303 -10 310 252 29 154 chr10 131757241 131757406 -8559359 - L2 LINE L2 -86 3227 3098 342 0 0 0 chr10 131758659 131758704 -8558061 + (TG)n Simple_repeat Simple_repeat 1 83 0 342 0 0 0 chr10 131758704 131758742 -8558023 + (TG)n Simple_repeat Simple_repeat 2 39 0 863 123 0 43 chr10 131758753 131758891 -8557874 - FLAM_C SINE Alu -1 132 1 1387 164 64 8 chr10 131759703 131759995 -8556770 + AluJb SINE Alu 18 323 0 1486 156 51 5 chr10 131760009 131760375 -8556390 + L1M3 LINE L1 5169 5554 -626 769 159 40 0 chr10 131760576 131760727 -8556038 + L1MC4a LINE L1 7083 7239 -569 921 213 92 103 chr10 131760732 131760929 -8555836 + L1MC4 LINE L1 7579 7777 -265 1722 173 32 0 chr10 131760929 131761207 -8555558 + AluJo SINE Alu 1 287 -25 921 213 92 103 chr10 131761207 131761263 -8555502 + L1MC4 LINE L1 7777 7832 -210 2457 88 3 0 chr10 131761263 131761570 -8555195 + AluSx SINE Alu 1 308 -4 921 213 92 103 chr10 131761570 131761771 -8554994 + L1MC4 LINE L1 7832 8029 -13 213 196 0 0 chr10 131762042 131762093 -8554672 + CT-rich Low_complexity Low_complexity 1 51 0 1630 173 54 0 chr10 131762093 131762370 -8554395 - AluSx SINE Alu -20 292 1 743 203 21 91 chr10 131762614 131762733 -8554032 - FAM SINE Alu -137 174 71 2158 79 21 3 chr10 131762733 131763023 -8553742 - AluSg SINE Alu -15 295 1 743 203 21 91 chr10 131763023 131763090 -8553675 - FAM SINE Alu -240 71 1 459 212 73 87 chr10 131763341 131763479 -8553286 + MLT1K LTR MaLR 461 583 -5 588 254 69 40 chr10 131763748 131764023 -8552742 + MLT1J LTR MaLR 222 504 -7 192 203 0 135 chr10 131764116 131764147 -8552618 - MIR SINE MIR -62 146 129 2351 164 70 45 chr10 131764147 131764636 -8552129 - MLT1D LTR MaLR 0 505 5 192 203 0 135 chr10 131764636 131764678 -8552087 - MIR SINE MIR -79 129 83 2326 104 0 3 chr10 131765839 131766136 -8550629 - AluSx SINE Alu -16 296 1 835 142 0 15 chr10 131766155 131766289 -8550476 - FLAM_C SINE Alu 0 133 2 23 33 0 0 chr10 131766504 131766534 -8550231 + GC_rich Low_complexity Low_complexity 1 30 0 445 198 18 87 chr10 131766902 131767015 -8549750 + MER33 DNA MER1_type 2 137 -2487 1796 148 7 3 chr10 131767015 131767306 -8549459 + AluJo SINE Alu 1 292 -20 445 198 18 87 chr10 131767306 131767388 -8549377 + MER33 DNA MER1_type 137 223 -140 1228 126 0 0 chr10 131767391 131767566 -8549199 - AluSg/x SINE Alu -3 309 135 2259 82 7 3 chr10 131767567 131767858 -8548907 - AluSq SINE Alu -10 303 12 468 191 35 7 chr10 131767867 131768008 -8548757 + MER33 DNA MER1_type 219 363 0 2255 92 7 3 chr10 131768069 131768363 -8548402 - AluSq SINE Alu -18 295 1 860 150 8 0 chr10 131768382 131768509 -8548256 - FLAM_C SINE Alu -5 128 1 2027 138 20 7 chr10 131768512 131768817 -8547948 - AluJb SINE Alu -3 309 1 446 290 76 0 chr10 131769515 131769646 -8547119 + L1MC/D LINE L1 5620 5760 -2048 364 318 52 15 chr10 131769785 131770113 -8546652 - L2 LINE L2 -217 3096 2694 503 231 103 74 chr10 131770201 131770319 -8546446 + L1MC4a LINE L1 5280 5393 -728 1606 149 4 4 chr10 131770319 131770560 -8546205 - AluSx SINE Alu -71 241 1 503 231 103 74 chr10 131770560 131770705 -8546060 + L1MC4a LINE L1 5393 5552 -569 455 238 141 32 chr10 131770717 131770902 -8545863 + L1MC4a LINE L1 5620 5824 -1984 317 309 95 80 chr10 131770915 131771156 -8545609 + L1MC4a LINE L1 5861 6110 -1698 2131 144 0 0 chr10 131771156 131771455 -8545310 - AluSx SINE Alu -13 299 1 317 309 95 80 chr10 131771455 131771550 -8545215 + L1MC4a LINE L1 6110 6202 -1606 1930 111 82 4 chr10 131771558 131771828 -8544937 + AluJo SINE Alu 3 293 -19 253 326 38 14 chr10 131771847 131772087 -8544678 - L2 LINE L2 -606 2708 2420 191 304 89 0 chr10 131772105 131772184 -8544581 + L2 LINE L2 3206 3291 -22 958 163 0 25 chr10 131772204 131772364 -8544401 - AluJb SINE Alu 0 312 157 2126 112 30 3 chr10 131772382 131772708 -8544057 - AluSx SINE Alu 0 312 1 219 180 40 0 chr10 131774316 131774366 -8542399 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 315 244 0 47 chr10 131774367 131774453 -8542312 - L2 LINE L2 0 3313 3232 254 281 31 10 chr10 131774587 131774683 -8542082 - L2 LINE L2 -291 3022 2925 393 117 0 0 chr10 131775328 131775388 -8541377 + (CAA)n Simple_repeat Simple_repeat 1 60 0 327 264 46 23 chr10 131776084 131776171 -8540594 - L1MC4 LINE L1 -1350 6692 6604 200 59 29 0 chr10 131776178 131776212 -8540553 + (TA)n Simple_repeat Simple_repeat 1 35 0 1830 156 30 23 chr10 131776497 131776799 -8539966 - AluSx SINE Alu -8 304 1 404 222 137 8 chr10 131776816 131776933 -8539832 - MER20B DNA MER1_type -285 498 367 2055 119 41 3 chr10 131777534 131777827 -8538938 - AluSx SINE Alu -8 304 1 2378 107 3 0 chr10 131777915 131778223 -8538542 - AluSq SINE Alu -4 309 1 1390 188 59 73 chr10 131778889 131779040 -8537725 - LTR23 LTR ERV1 0 437 285 2199 119 3 6 chr10 131779040 131779352 -8537413 - AluSx SINE Alu -1 311 1 1390 188 59 73 chr10 131779352 131779641 -8537124 - LTR23 LTR ERV1 -152 285 3 1272 96 0 0 chr10 131779641 131779797 -8536968 - AluSp SINE Alu -27 286 131 22 35 0 0 chr10 131780178 131780207 -8536558 + GC_rich Low_complexity Low_complexity 1 29 0 475 267 30 22 chr10 131780571 131780706 -8536059 - MIR3 SINE MIR -52 156 21 2253 107 7 7 chr10 131781875 131782174 -8534591 - AluSx SINE Alu -13 299 1 2023 125 0 72 chr10 131782637 131782813 -8533952 - AluSx SINE Alu -14 298 111 192 40 0 0 chr10 131782813 131782838 -8533927 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2161 117 0 0 chr10 131782839 131783120 -8533645 - AluSx SINE Alu -31 281 1 2365 110 0 0 chr10 131783124 131783424 -8533341 - AluSg SINE Alu -10 300 1 2023 125 0 72 chr10 131783424 131783561 -8533204 - AluSx SINE Alu -204 108 1 198 0 0 0 chr10 131784888 131784910 -8531855 + (A)n Simple_repeat Simple_repeat 1 22 0 2311 119 0 0 chr10 131785150 131785462 -8531303 + AluSq SINE Alu 1 312 -1 900 215 6 6 chr10 131786487 131786650 -8530115 + FRAM SINE Alu 1 163 -3 300 53 0 0 chr10 131786650 131786688 -8530077 + (GGAA)n Simple_repeat Simple_repeat 1 38 0 610 270 61 61 chr10 131786771 131787082 -8529683 + MLT1F LTR MaLR 1 311 -231 216 167 0 0 chr10 131787125 131787161 -8529604 + MER5A DNA MER1_type 134 169 -20 1364 156 41 7 chr10 131787412 131787682 -8529083 + L1M3 LINE L1 5276 5554 -626 769 159 40 0 chr10 131787883 131788034 -8528731 + L1MC4a LINE L1 7083 7239 -569 1189 182 90 98 chr10 131788039 131788236 -8528529 + L1MC4 LINE L1 7579 7776 -266 1722 173 32 0 chr10 131788236 131788514 -8528251 + AluJo SINE Alu 1 287 -25 1189 182 90 98 chr10 131788514 131788570 -8528195 + L1MC4 LINE L1 7776 7831 -211 2407 90 3 6 chr10 131788570 131788881 -8527884 + AluSx SINE Alu 1 310 -2 1189 182 90 98 chr10 131788881 131789093 -8527672 + L1MC4 LINE L1 7831 8041 -1 2499 97 0 0 chr10 131789249 131789558 -8527207 + AluSg SINE Alu 1 309 -1 1816 170 3 0 chr10 131789952 131790234 -8526531 + AluJo SINE Alu 13 295 -17 1250 147 163 52 chr10 131790235 131790487 -8526278 + AluJo SINE Alu 1 280 -32 183 129 0 0 chr10 131790487 131790518 -8526247 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 421 206 0 0 chr10 131790737 131790810 -8525955 - AluJ/FLAM SINE Alu -238 74 2 495 107 0 0 chr10 131790953 131791028 -8525737 + (CA)n Simple_repeat Simple_repeat 2 76 0 2163 112 13 0 chr10 131791119 131791423 -8525342 + AluSp SINE Alu 1 308 -5 1784 156 16 25 chr10 131792515 131792830 -8523935 + AluJo SINE Alu 1 312 0 719 188 0 8 chr10 131793017 131793145 -8523620 - FLAM_A SINE Alu -7 135 9 306 287 168 3 chr10 131793404 131793542 -8523223 + MIR3 SINE MIR 37 197 -54 649 186 45 62 chr10 131795004 131795246 -8521519 - AluSg/x SINE Alu -3 307 70 2238 82 20 7 chr10 131795492 131795795 -8520970 - AluSx SINE Alu -5 307 1 29 47 0 0 chr10 131796976 131797019 -8519746 + GC_rich Low_complexity Low_complexity 1 43 0 317 274 51 0 chr10 131797783 131797900 -8518865 - MIR3 SINE MIR -18 190 68 273 264 96 62 chr10 131797983 131798059 -8518706 - LTR33 LTR ERVL -3 518 446 1673 144 8 4 chr10 131798059 131798322 -8518443 + AluJo SINE Alu 12 275 -37 186 43 0 0 chr10 131798327 131798350 -8518415 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 273 264 96 62 chr10 131798350 131798475 -8518290 - LTR33 LTR ERVL -78 443 304 514 248 81 7 chr10 131798544 131798693 -8518072 - LTR33 LTR ERVL -361 160 1 1041 111 0 0 chr10 131799580 131799724 -8517041 + AluSp SINE Alu 137 280 -33 1698 148 36 7 chr10 131799853 131800165 -8516600 - AluJb SINE Alu 0 320 1 821 133 0 73 chr10 131800995 131801145 -8515620 - FLAM_C SINE Alu -4 139 1 1968 99 4 7 chr10 131801220 131801493 -8515272 + AluSp SINE Alu 3 274 -39 785 116 7 96 chr10 131801927 131802073 -8514692 - AluJb SINE Alu -178 134 2 265 241 17 0 chr10 131802326 131802384 -8514381 + L2 LINE L2 3238 3296 -17 361 167 15 0 chr10 131802541 131802607 -8514158 + L2 LINE L2 3168 3234 -38 2045 137 13 0 chr10 131802633 131802932 -8513833 - AluSx SINE Alu -9 303 1 1043 152 37 0 chr10 131802986 131803177 -8513588 + L1MB5 LINE L1 5270 5467 -711 1601 147 84 18 chr10 131803179 131803464 -8513301 - AluJb SINE Alu -8 304 1 355 165 94 0 chr10 131803472 131803557 -8513208 - FLAM SINE Alu 0 133 41 1828 142 0 7 chr10 131803572 131803847 -8512918 - AluSx SINE Alu -39 273 1 2180 117 3 0 chr10 131803847 131804156 -8512609 - AluSx SINE Alu -2 310 1 1288 133 0 19 chr10 131804173 131804384 -8512381 - L1PB3 LINE L1 -1 6153 5947 257 161 0 0 chr10 131804393 131804449 -8512316 - AluSp/q SINE Alu -5 298 243 1278 115 5 0 chr10 131805112 131805304 -8511461 + AluSp SINE Alu 121 313 0 2486 185 13 2 chr10 131805305 131805780 -8510985 + L1MB5 LINE L1 5488 5967 -207 2091 105 0 7 chr10 131805780 131806075 -8510690 + AluSc SINE Alu 1 293 -16 671 209 86 0 chr10 131806089 131806252 -8510513 + AluJb SINE Alu 130 306 -6 2092 86 23 10 chr10 131806346 131806649 -8510116 + AluSc SINE Alu 1 307 -2 1539 170 68 10 chr10 131806687 131806981 -8509784 - AluJb SINE Alu -1 311 1 239 284 0 0 chr10 131806981 131807048 -8509717 + MIR SINE MIR 58 124 -138 214 266 53 32 chr10 131807039 131807133 -8509632 + MIR SINE MIR 58 153 -55 * 417 205 62 0 chr10 131807135 131807247 -8509518 + L1ME LINE L1 5318 5436 -730 871 129 0 8 chr10 131807249 131807381 -8509384 + AluSc SINE Alu 1 131 -178 198 309 25 12 chr10 131807520 131807601 -8509164 + L2 LINE L2 3191 3272 0 1987 85 62 4 chr10 131808065 131808337 -8508428 + AluSq SINE Alu 1 288 -25 204 111 0 0 chr10 131809234 131809270 -8507495 + (GA)n Simple_repeat Simple_repeat 1 36 0 745 184 38 19 chr10 131809888 131810046 -8506719 - MER77 LTR ERV1 -444 161 1 1858 204 95 5 chr10 131810046 131810478 -8506287 - L1ME2 LINE L1 -261 5903 5433 2140 122 3 3 chr10 131810487 131810799 -8505966 - AluSx SINE Alu 0 312 1 216 280 30 50 chr10 131811275 131811375 -8505390 + MIR SINE MIR 108 205 -57 220 246 14 14 chr10 131811749 131811818 -8504947 + CT-rich Low_complexity Low_complexity 2 70 0 403 325 49 20 chr10 131812193 131812439 -8504326 - L1ME4a LINE L1 -3 6118 5866 2132 84 3 3 chr10 131812521 131812806 -8503959 - AluSc SINE Alu -24 285 1 326 238 11 49 chr10 131813035 131813220 -8503545 + (TCTCTG)n Simple_repeat Simple_repeat 1 178 0 254 265 29 0 chr10 131813962 131814030 -8502735 - L1ME4a LINE L1 -509 5612 5543 252 311 54 34 chr10 131814403 131814551 -8502214 - L3 LINE CR1 -2 1575 1425 2078 128 0 0 chr10 131814866 131815164 -8501601 + AluSx SINE Alu 1 298 -14 755 222 179 57 chr10 131815189 131815553 -8501212 + Charlie8 DNA MER1_type 92 500 -1917 1593 195 101 13 chr10 131815553 131815928 -8500837 - MLT2D LTR ERVL 0 414 7 857 174 0 0 chr10 131816133 131816265 -8500500 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr10 131817075 131817098 -8499667 + AT_rich Low_complexity Low_complexity 1 23 0 530 229 93 36 chr10 131819011 131819208 -8497557 - MIR SINE MIR -19 243 46 851 152 0 0 chr10 131820575 131820713 -8496052 + AluSg/x SINE Alu 172 309 -1 408 254 26 9 chr10 131820715 131820829 -8495936 - MIR SINE MIR -76 186 71 289 293 0 24 chr10 131820991 131821073 -8495692 + MIR3 SINE MIR 97 176 -32 2065 108 10 3 chr10 131822069 131822357 -8494408 + AluSg SINE Alu 1 290 -20 2266 103 0 0 chr10 131823930 131824231 -8492534 + AluSx SINE Alu 1 301 -11 487 262 61 84 chr10 131824562 131824825 -8491940 - L2 LINE L2 -39 3233 2977 498 135 39 118 chr10 131825445 131825674 -8491091 - MER113 DNA MER1_type? -305 216 6 605 301 123 23 chr10 131827185 131827534 -8489231 + L1ME4a LINE L1 5477 5790 -331 2366 124 11 3 chr10 131827534 131827882 -8488883 + L1PA15 LINE L1 5810 6160 -5 605 301 123 23 chr10 131827882 131828106 -8488659 + L1ME4a LINE L1 5790 6114 -7 466 266 61 84 chr10 131830459 131830722 -8486043 + L2 LINE L2 2977 3233 -39 2358 72 0 3 chr10 131830868 131831173 -8485592 + AluY SINE Alu 1 304 -7 331 280 274 0 chr10 131831185 131831342 -8485423 - MIR SINE MIR -27 235 36 1510 114 126 8 chr10 131831607 131831893 -8484872 - AluSq SINE Alu 0 316 1 49 48 0 29 chr10 131831942 131831996 -8484769 + AT_rich Low_complexity Low_complexity 1 52 -48 1949 119 31 0 chr10 131831996 131832289 -8484476 - AluSx SINE Alu -10 302 1 49 48 0 29 chr10 131832289 131832337 -8484428 + AT_rich Low_complexity Low_complexity 52 100 0 262 292 102 59 chr10 131832580 131832816 -8483949 - L2 LINE L2 -89 3183 2938 5260 259 44 20 chr10 131832826 131833329 -8483436 - L1MEc LINE L1 -4619 1777 1288 1947 156 0 0 chr10 131833329 131833631 -8483134 - AluJo SINE Alu -6 306 5 5260 259 44 20 chr10 131833631 131834609 -8482156 - L1MEc LINE L1 -5108 1288 249 1496 221 69 35 chr10 131834609 131834985 -8481780 - MLT1B LTR MaLR -1 389 1 5260 259 44 20 chr10 131834985 131835167 -8481598 - L1MEc LINE L1 -6147 249 73 2242 89 0 13 chr10 131837468 131837781 -8478984 - AluSx SINE Alu -3 309 1 2644 83 16 23 chr10 131837976 131838354 -8478411 - L1PB1 LINE L1 -2 6149 5774 2479 64 0 3 chr10 131838354 131838666 -8478099 - AluY SINE Alu 0 311 1 1417 77 43 0 chr10 131838672 131838881 -8477884 - L1PA13 LINE L1 -1 6162 5945 197 211 0 0 chr10 131838902 131838940 -8477825 + L2 LINE L2 3217 3254 -18 659 235 52 6 chr10 131839299 131839531 -8477234 + MER33 DNA MER1_type 1 275 -49 213 196 0 0 chr10 131840375 131840421 -8476344 + (CA)n Simple_repeat Simple_repeat 1 46 0 664 174 159 50 chr10 131842585 131842786 -8473979 - L1MB8 LINE L1 0 6178 5956 2258 119 0 0 chr10 131842798 131843110 -8473655 - AluSx SINE Alu 0 312 1 1507 121 9 13 chr10 131843153 131843377 -8473388 + AluJo SINE Alu 69 291 -21 225 148 16 0 chr10 131843378 131843439 -8473326 - L1MB3 LINE L1 0 6183 6122 334 343 34 11 chr10 131843769 131843944 -8472821 - L1ME LINE L1 -420 5750 5572 580 335 0 5 chr10 131844845 131845030 -8471735 - MIR SINE MIR -66 196 13 229 231 15 154 chr10 131846232 131846306 -8470459 + MIR SINE MIR 38 88 -174 1615 163 42 3 chr10 131846306 131846589 -8470176 - AluJo SINE Alu -4 308 15 229 231 15 154 chr10 131846589 131846644 -8470121 + MIR SINE MIR 88 149 -113 2138 106 0 0 chr10 131846877 131847192 -8469573 - AluSx SINE Alu 0 315 1 286 257 71 44 chr10 131847279 131847392 -8469373 - L2 LINE L2 -15 3298 3183 2316 61 0 14 chr10 131847557 131847850 -8468915 - AluY SINE Alu -4 307 19 366 143 0 0 chr10 131848325 131848388 -8468377 + (CA)n Simple_repeat Simple_repeat 1 63 0 237 108 0 0 chr10 131849062 131849099 -8467666 + (CA)n Simple_repeat Simple_repeat 1 37 0 2620 287 137 5 chr10 131849972 131851105 -8465660 - L1MC4 LINE L1 -304 7738 6457 244 294 226 0 chr10 131851473 131851575 -8465190 + MIR SINE MIR 46 170 -92 213 316 107 23 chr10 131853002 131853138 -8463627 + MIR SINE MIR 1 147 -67 328 276 41 0 chr10 131853575 131853673 -8463092 + MIR SINE MIR 82 183 -79 181 307 93 27 chr10 131853644 131853719 -8463046 - L3 LINE CR1 -904 673 594 * 387 278 278 0 chr10 131853725 131853876 -8462889 - MIR SINE MIR -65 197 5 1559 164 19 45 chr10 131853933 131854243 -8462522 - AluJo SINE Alu -10 302 1 252 306 121 57 chr10 131855535 131855692 -8461073 - MIR SINE MIR 0 262 96 309 258 114 48 chr10 131857236 131857403 -8459362 - MIR3 SINE MIR -27 181 4 379 274 14 82 chr10 131857836 131857877 -8458888 + MIR SINE MIR 111 153 -109 1991 128 3 14 chr10 131857877 131858012 -8458753 + AluJb SINE Alu 1 136 -176 1929 106 91 0 chr10 131858012 131858286 -8458479 + AluSx SINE Alu 1 299 -13 1991 128 3 14 chr10 131858286 131858447 -8458318 + AluJb SINE Alu 136 294 -18 379 274 14 82 chr10 131858447 131858551 -8458214 + MIR SINE MIR 153 246 -16 454 198 68 53 chr10 131859424 131859631 -8457134 - ORSL DNA AcHobo -42 233 24 396 266 203 0 chr10 131860844 131861002 -8455763 - MIR SINE MIR -51 211 22 21 36 0 0 chr10 131862286 131862314 -8454451 + AT_rich Low_complexity Low_complexity 1 28 0 341 150 276 24 chr10 131862314 131862441 -8454324 - L1ME4a LINE L1 0 6121 5963 245 372 49 12 chr10 131863751 131863915 -8452850 + MIR SINE MIR 87 256 -6 180 0 0 0 chr10 131864545 131864565 -8452200 + (TCCC)n Simple_repeat Simple_repeat 3 22 0 2290 46 0 28 chr10 131864920 131865240 -8451525 - AluY SINE Alu 0 315 4 380 352 51 80 chr10 131865489 131865841 -8450924 - L1MC4a LINE L1 -1759 6049 5708 258 306 19 46 chr10 131867193 131867301 -8449464 - L2 LINE L2 -961 2353 2249 272 286 36 0 chr10 131867318 131867402 -8449363 - MIR SINE MIR -106 102 16 1803 124 33 37 chr10 131867688 131867987 -8448778 + AluJo SINE Alu 1 298 -14 464 308 92 5 chr10 131868287 131868482 -8448283 + MIR SINE MIR 9 220 -42 236 208 0 0 chr10 131868679 131868727 -8448038 - L3 LINE CR1 -116 1461 1414 259 258 76 61 chr10 131869463 131869595 -8447170 + MIR SINE MIR 12 145 -117 283 212 298 13 chr10 131870738 131870889 -8445876 - MIR SINE MIR -32 230 37 2647 35 0 3 chr10 131871981 131872293 -8444472 - AluY SINE Alu 0 311 1 211 262 215 78 chr10 131872609 131872702 -8444063 + MIR SINE MIR 37 116 -146 218 79 0 26 chr10 131872702 131872740 -8444025 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1652 148 14 48 chr10 131872740 131873030 -8443735 - AluJo SINE Alu -32 280 1 211 262 215 78 chr10 131873030 131873126 -8443639 + MIR SINE MIR 115 253 -9 655 313 45 18 chr10 131873440 131873664 -8443101 - MIR SINE MIR -12 250 21 345 274 8 8 chr10 131874129 131874246 -8442519 - L1MEc LINE L1 -6192 204 88 347 323 184 15 chr10 131874328 131874529 -8442236 - MIR SINE MIR 0 262 28 197 295 64 13 chr10 131874577 131874655 -8442110 - MIR SINE MIR -108 100 19 693 298 93 56 chr10 131874883 131875387 -8441378 - L1ME4a LINE L1 -285 5836 5314 302 292 18 18 chr10 131875633 131875746 -8441019 + MIR SINE MIR 33 145 -117 193 268 36 0 chr10 131875864 131875920 -8440845 + L2 LINE L2 3213 3270 -2 191 250 60 36 chr10 131876903 131876987 -8439778 - MIR SINE MIR -118 144 59 274 285 117 14 chr10 131878722 131878936 -8437829 - L1ME4a LINE L1 0 6121 5886 4828 218 107 7 chr10 131879419 131880559 -8436206 + L1MDa LINE L1 16 1312 -5228 1850 153 4 4 chr10 131880559 131880868 -8435897 + AluJb SINE Alu 1 309 0 4828 218 107 7 chr10 131880868 131881059 -8435706 + L1MDa LINE L1 1312 1482 -5058 3080 177 65 60 chr10 131881031 131881184 -8435581 + L1MD1 LINE L1 5711 5862 -774 * 1944 164 0 13 chr10 131881184 131881495 -8435270 + AluSx SINE Alu 1 307 -5 3080 177 65 60 chr10 131881495 131882254 -8434511 + L1MD1 LINE L1 5862 6627 -9 1653 164 6 53 chr10 131882469 131882660 -8434105 - AluJo SINE Alu -4 308 137 2319 77 0 7 chr10 131882660 131882957 -8433808 - AluSc SINE Alu -14 295 1 1653 164 6 53 chr10 131882957 131883088 -8433677 - AluJo SINE Alu -175 137 1 1147 150 11 1 chr10 131883336 131883558 -8433207 + L1PB1 LINE L1 5782 6006 -145 466 226 137 0 chr10 131885010 131885134 -8431631 - MER63A DNA MER1_type -3 207 67 196 264 132 16 chr10 131885678 131885807 -8430958 + L2 LINE L2 3075 3218 -54 374 333 8 8 chr10 131886251 131886383 -8430382 + (CA)n Simple_repeat Simple_repeat 2 133 0 2304 69 0 10 chr10 131886442 131886748 -8430017 - AluSc SINE Alu -6 303 1 729 314 68 9 chr10 131886758 131887083 -8429682 - L1ME3A LINE L1 0 6170 5827 620 185 101 11 chr10 131888351 131888529 -8428236 - L1ME3 LINE L1 -4 6158 5965 3039 175 30 24 chr10 131889000 131889428 -8427337 - L1MB7 LINE L1 -19 6165 5732 1960 122 116 36 chr10 131889428 131889765 -8427000 + THE1B LTR MaLR 1 364 0 3039 175 30 24 chr10 131889765 131889913 -8426852 - L1MB7 LINE L1 -452 5732 5586 553 261 197 34 chr10 131890351 131890846 -8425919 - L2 LINE L2 -188 3125 2579 2290 110 0 0 chr10 131890883 131891193 -8425572 + AluSx SINE Alu 1 310 -2 400 128 26 0 chr10 131891214 131891292 -8425473 + GA-rich Low_complexity Low_complexity 4 83 0 328 390 67 0 chr10 131891509 131891673 -8425092 - L1MC4a LINE L1 -1963 5845 5671 631 243 60 5 chr10 131891673 131891858 -8424907 - L1MD3 LINE L1 0 7995 7801 1821 150 31 3 chr10 131891858 131892145 -8424620 - AluJo SINE Alu -17 295 1 181 289 0 0 chr10 131892333 131892378 -8424387 - MIR3 SINE MIR -50 158 114 218 347 21 14 chr10 131893188 131893332 -8423433 - L2 LINE L2 -233 3039 2895 * 278 349 119 4 chr10 131893330 131893599 -8423166 + L2 LINE L2 2064 2363 -951 773 244 70 30 chr10 131893602 131893873 -8422892 + L1MC4a LINE L1 7162 7443 -365 389 306 92 29 chr10 131895581 131895754 -8421011 - MIR SINE MIR -73 189 6 264 329 24 0 chr10 131896192 131896274 -8420491 + (CATA)n Simple_repeat Simple_repeat 2 85 0 180 111 0 0 chr10 131896958 131896985 -8419780 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 418 291 24 22 chr10 131897990 131898208 -8418557 - L1ME3A LINE L1 -356 5806 5583 813 308 47 36 chr10 131898328 131899088 -8417677 - L1P5 LINE L1 -523 5633 4860 3487 155 45 78 chr10 131899126 131899240 -8417525 - L1MB8 LINE L1 -1 6177 6061 2295 107 0 16 chr10 131899240 131899558 -8417207 - AluSq SINE Alu 0 313 1 3487 155 45 78 chr10 131899558 131900303 -8416462 - L1MB8 LINE L1 -117 6061 5293 189 0 0 0 chr10 131900303 131900324 -8416441 + (CA)n Simple_repeat Simple_repeat 2 22 0 2225 89 3 3 chr10 131900324 131900616 -8416149 - AluY SINE Alu -19 292 1 3487 155 45 78 chr10 131900616 131900630 -8416135 - L1MB8 LINE L1 -884 5294 5281 1669 188 14 10 chr10 131900630 131900918 -8415847 - AluJo SINE Alu -23 289 1 3487 155 45 78 chr10 131900918 131901027 -8415738 - L1MB8 LINE L1 -897 5281 5225 1138 183 43 0 chr10 131901027 131901257 -8415508 - Tigger2a DNA MER2_type 0 434 195 973 125 0 21 chr10 131901257 131901401 -8415364 + FLAM_C SINE Alu 1 141 -2 995 109 10 94 chr10 131901401 131901603 -8415162 - Tigger2a DNA MER2_type -249 185 1 2366 214 46 16 chr10 131901603 131901988 -8414777 - L1MB8 LINE L1 -920 5226 4811 2062 191 92 0 chr10 131901988 131902380 -8414385 - MSTA LTR MaLR 0 428 1 2366 214 46 16 chr10 131902380 131902640 -8414125 - L1MB8 LINE L1 -1335 4811 4561 380 130 14 0 chr10 131902640 131902709 -8414056 - MLT1A1 LTR MaLR 0 457 388 1356 130 33 0 chr10 131902709 131902924 -8413841 + AluJo SINE Alu 87 308 -4 980 211 32 67 chr10 131902924 131903236 -8413529 - MLT1A1 LTR MaLR -60 305 5 1938 102 0 18 chr10 131903336 131903611 -8413154 + AluSq SINE Alu 36 305 -8 327 333 86 50 chr10 131903914 131904193 -8412572 + L2 LINE L2 2916 3204 -68 1089 115 6 13 chr10 131904550 131904706 -8412059 + AluSx SINE Alu 1 155 -157 412 300 150 70 chr10 131904850 131905077 -8411688 - L1MC4a LINE L1 -1633 6175 5931 2190 113 0 0 chr10 131905182 131905483 -8411282 + AluSx SINE Alu 1 301 -11 1748 175 0 31 chr10 131905582 131905902 -8410863 + AluJb SINE Alu 1 310 -2 266 89 44 0 chr10 131905902 131905947 -8410818 + GA-rich Low_complexity Low_complexity 1 47 0 205 278 37 0 chr10 131907144 131907198 -8409567 - MIR SINE MIR -118 144 89 1833 157 0 17 chr10 131907239 131907539 -8409226 + AluSg SINE Alu 1 295 -15 714 173 67 17 chr10 131907556 131907735 -8409030 - MER20 DNA MER1_type -3 216 29 193 398 44 9 chr10 131907756 131907869 -8408896 - MIR SINE MIR -131 131 15 2217 102 3 0 chr10 131908299 131908603 -8408162 + AluSx SINE Alu 4 308 -4 2004 119 58 0 chr10 131909119 131909413 -8407352 - AluSx SINE Alu -1 311 1 242 294 84 59 chr10 131911530 131911649 -8405116 + MIR3 SINE MIR 42 163 -45 256 137 98 0 chr10 131912365 131912416 -8404349 - MIR SINE MIR -76 132 77 627 231 40 0 chr10 131912433 131912606 -8404159 - L1M4 LINE L1 -3008 3138 2959 213 284 0 15 chr10 131912606 131912673 -8404092 + MER5B DNA MER1_type 112 177 -1 210 214 34 101 chr10 131914199 131914288 -8402477 + MIR3 SINE MIR 90 172 -36 2013 112 0 7 chr10 131914914 131915192 -8401573 + AluSx SINE Alu 31 306 -6 2178 113 3 3 chr10 131915467 131915769 -8400996 - AluSx SINE Alu -10 302 1 989 92 0 0 chr10 131915770 131915911 -8400854 + THE1B LTR MaLR 224 364 0 369 301 86 0 chr10 131916652 131916815 -8399950 - L1ME3 LINE L1 -9 6153 5977 810 333 27 10 chr10 131916896 131917304 -8399461 - L1ME3 LINE L1 -315 5855 5441 1715 196 105 85 chr10 131917630 131918171 -8398594 + MLT2B3 LTR ERVL 3 554 0 246 322 58 0 chr10 131918913 131919000 -8397765 + MIR SINE MIR 111 202 -60 360 193 12 36 chr10 131919454 131919619 -8397146 + (TCCA)n Simple_repeat Simple_repeat 1 161 0 291 169 45 22 chr10 131919650 131919739 -8397026 + (TCCA)n Simple_repeat Simple_repeat 2 92 0 554 110 83 14 chr10 131919770 131919915 -8396850 + (TCCA)n Simple_repeat Simple_repeat 2 156 0 491 167 16 54 chr10 131919953 131920139 -8396626 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 293 272 81 30 chr10 131920166 131920333 -8396432 - MIR SINE MIR -59 203 30 204 28 0 83 chr10 131921880 131921916 -8394849 - L2 LINE L2 -214 3058 3026 340 331 62 0 chr10 131923022 131923167 -8393598 + MIR SINE MIR 36 189 -73 183 204 136 0 chr10 131923362 131923406 -8393359 + MIR SINE MIR 82 131 -131 316 336 104 48 chr10 131926108 131926501 -8390264 - L2 LINE L2 -1 3271 2857 183 80 0 0 chr10 131926678 131926703 -8390062 + (AGGGGG)n Simple_repeat Simple_repeat 5 29 0 330 281 0 0 chr10 131927451 131927533 -8389232 - MIR SINE MIR -66 142 61 258 262 24 42 chr10 131927759 131927927 -8388838 + (TCTCTG)n Simple_repeat Simple_repeat 6 170 0 364 331 38 0 chr10 131929283 131929416 -8387349 - MIR SINE MIR -64 198 61 250 159 0 0 chr10 131929418 131929462 -8387303 - MIR SINE MIR -113 149 106 308 248 149 8 chr10 131929904 131930025 -8386740 - MER58C DNA MER1_type 0 215 78 1996 127 17 3 chr10 131930088 131930380 -8386385 - AluJb SINE Alu -16 296 1 465 332 59 40 chr10 131930496 131930917 -8385848 - L1ME3 LINE L1 -164 6000 5554 289 283 0 39 chr10 131931138 131931318 -8385447 + (TGGG)n Simple_repeat Simple_repeat 3 175 0 * 384 303 0 0 chr10 131931200 131931378 -8385387 + (TGG)n Simple_repeat Simple_repeat 2 179 0 * 422 192 0 78 chr10 131931353 131931688 -8385077 + (ATGGTG)n Simple_repeat Simple_repeat 1 308 0 423 198 83 25 chr10 131931892 131932013 -8384752 + MIR SINE MIR 20 147 -61 2049 105 10 10 chr10 131932754 131933058 -8383707 + AluSq SINE Alu 1 304 -9 293 215 7 89 chr10 131934009 131934144 -8382621 + C-rich Low_complexity Low_complexity 2 125 0 370 256 31 54 chr10 131934867 131935033 -8381732 - MIR3 SINE MIR -8 200 35 2297 99 0 3 chr10 131935238 131935552 -8381213 - AluSq SINE Alu 0 313 1 2374 67 3 3 chr10 131936379 131936677 -8380088 - AluY SINE Alu -13 298 1 241 340 32 48 chr10 131936799 131936966 -8379799 - MIR SINE MIR -56 152 4 240 267 13 13 chr10 131937696 131937771 -8378994 - MLT1K LTR MaLR -36 552 478 337 282 206 8 chr10 131938437 131938568 -8378197 - L1ME4a LINE L1 -1 6120 5964 335 327 188 10 chr10 131944437 131944730 -8372035 + L1ME LINE L1 5424 5684 -437 1068 216 65 7 chr10 131947050 131947328 -8369437 + MLT1A1 LTR MaLR 72 365 0 744 296 74 17 chr10 131949237 131949656 -8367109 + LTR16A1 LTR ERVL 11 453 -4 1752 168 0 7 chr10 131950763 131951060 -8365705 + AluJb SINE Alu 1 295 -17 229 156 0 44 chr10 131951447 131951492 -8365273 - L2 LINE L2 -11 3261 3219 267 279 51 0 chr10 131953349 131953428 -8363337 - MIR3 SINE MIR -45 163 81 374 243 90 21 chr10 131953511 131953655 -8363110 + MIR SINE MIR 36 189 -73 415 312 119 48 chr10 131953821 131954594 -8362171 + L1MC4a LINE L1 4392 5109 -1037 3595 168 25 24 chr10 131954594 131954995 -8361770 + L1MB7 LINE L1 5538 5942 -242 2595 100 42 0 chr10 131954995 131955355 -8361410 + THE1C LTR MaLR 1 375 0 3595 168 25 24 chr10 131955355 131955586 -8361179 + L1MB7 LINE L1 5942 6171 -13 415 312 119 48 chr10 131955586 131955714 -8361051 + L1MC4a LINE L1 5109 5227 -919 2165 101 16 3 chr10 131955714 131956020 -8360745 - AluSg SINE Alu 0 310 1 415 312 119 48 chr10 131956020 131956610 -8360155 + L1MC4a LINE L1 5227 5399 -747 2018 80 14 31 chr10 131958721 131959034 -8357731 + AluY SINE Alu 1 308 0 308 277 89 0 chr10 131959049 131959150 -8357615 + MIR SINE MIR 89 198 -64 281 269 131 39 chr10 131960506 131960636 -8356129 - MIR SINE MIR -117 145 4 195 296 86 0 chr10 131961367 131961448 -8355317 - MIR SINE MIR -171 91 4 491 317 72 0 chr10 131962468 131962648 -8354117 - MIR SINE MIR -25 237 45 199 361 74 0 chr10 131964780 131964888 -8351877 + MIR SINE MIR 58 173 -89 265 289 102 47 chr10 131967781 131967909 -8348856 - MIR SINE MIR -32 230 96 223 284 101 9 chr10 131968177 131968286 -8348479 - MIR SINE MIR -79 183 65 224 286 20 92 chr10 131969095 131969193 -8347572 + MIR SINE MIR 107 197 -65 380 208 111 3 chr10 131969286 131969430 -8347335 - MIR SINE MIR -68 140 16 266 254 221 33 chr10 131969679 131969801 -8346964 + MIR3 SINE MIR 43 187 -21 230 254 119 0 chr10 131970538 131970605 -8346160 - MIR SINE MIR -98 164 90 201 333 43 0 chr10 131970845 131970914 -8345851 + L3 LINE CR1 1345 1416 -161 282 304 0 0 chr10 131971009 131971088 -8345677 + (ATGGTG)n Simple_repeat Simple_repeat 4 82 0 529 327 106 9 chr10 131971088 131971314 -8345451 - MIR SINE MIR -1 261 14 186 400 50 0 chr10 131972537 131972657 -8344108 - L2 LINE L2 -1 3271 3146 189 164 0 0 chr10 131972970 131973009 -8343756 - MIR SINE MIR -113 149 112 278 259 27 62 chr10 131973112 131973224 -8343541 + MIR3 SINE MIR 55 162 -46 282 337 95 11 chr10 131974225 131974415 -8342350 + MIR SINE MIR 7 212 -50 313 351 58 21 chr10 131976418 131976609 -8340156 + L2 LINE L2 3098 3295 -18 209 264 115 23 chr10 131976649 131976736 -8340029 + L2 LINE L2 3216 3310 -3 409 219 51 32 chr10 131977456 131977468 -8339297 + L1MC4 LINE L1 1968 1978 -6344 1781 29 0 0 chr10 131977468 131977672 -8339093 + L1PA5 LINE L1 5937 6140 -14 409 219 51 32 chr10 131977672 131977784 -8338981 + L1MC4 LINE L1 1978 6983 -1339 * 414 323 0 0 chr10 131977738 131977834 -8338931 - L1MC4 LINE L1 -1339 6703 6608 401 287 107 8 chr10 131977760 131977882 -8338883 + L1MCa LINE L1 1995 2128 -4298 * 420 274 17 95 chr10 131978088 131978267 -8338498 + L1ME4a LINE L1 5955 6119 -2 359 278 143 0 chr10 131978422 131978555 -8338210 - MIR SINE MIR -107 155 4 316 365 13 26 chr10 131979528 131979684 -8337081 + MIR SINE MIR 16 169 -93 2164 118 0 3 chr10 131980437 131980741 -8336024 - AluSx SINE Alu -9 303 1 685 189 15 154 chr10 131981373 131981569 -8335196 - MER58A DNA MER1_type -2196 224 71 895 109 0 0 chr10 131981569 131981697 -8335068 + L1PB3 LINE L1 6027 6154 0 685 189 15 154 chr10 131981697 131981759 -8335006 - MER58A DNA MER1_type -2349 71 2 307 301 153 12 chr10 131982803 131982966 -8333799 + MIR SINE MIR 77 262 0 693 82 0 0 chr10 131983051 131983148 -8333617 + (TCCA)n Simple_repeat Simple_repeat 4 100 0 1743 155 0 28 chr10 131983172 131983456 -8333309 + AluJo SINE Alu 5 280 -32 210 302 0 16 chr10 131983484 131983547 -8333218 - L2 LINE L2 -47 3225 3164 322 286 191 0 chr10 131984213 131984339 -8332426 - MER5A DNA MER1_type -34 155 6 376 155 42 0 chr10 131985388 131985459 -8331306 - MIR SINE MIR -100 162 89 351 313 45 0 chr10 131986365 131986477 -8330288 + L2 LINE L2 3155 3271 -1 255 324 41 59 chr10 131986527 131986697 -8330068 + L2 LINE L2 3096 3262 -10 793 248 65 7 chr10 131987714 131987992 -8328773 + MER33 DNA MER1_type 27 320 -4 241 257 68 0 chr10 131987995 131988069 -8328696 + MIR SINE MIR 111 189 -73 277 372 9 0 chr10 131988549 131988662 -8328103 - MIR SINE MIR -129 133 20 306 361 55 13 chr10 131991193 131991431 -8325334 + L2 LINE L2 2858 3105 -208 420 263 168 16 chr10 131991741 131992166 -8324599 + LTR50 LTR ERVL 216 795 0 278 349 138 30 chr10 131993388 131993657 -8323108 + L3b LINE CR1 1155 1452 -131 492 296 111 16 chr10 131993709 131993952 -8322813 + L2 LINE L2 2505 2770 -544 284 331 44 29 chr10 131994384 131994520 -8322245 + MER5B DNA MER1_type 29 166 -23 290 263 35 61 chr10 131994550 131994664 -8322101 - MIR SINE MIR -74 134 24 331 360 23 29 chr10 131994959 131995134 -8321631 - MIR SINE MIR -1 261 88 557 175 21 0 chr10 131995818 131995915 -8320850 + AluSg/x SINE Alu 208 306 -3 301 297 267 10 chr10 131996121 131996323 -8320442 - MIR SINE MIR -1 261 8 324 302 65 29 chr10 131996391 131996530 -8320235 + MIR3 SINE MIR 16 159 -49 441 297 25 0 chr10 131996555 131996673 -8320092 + MER117 DNA MER1_type 41 161 -36 253 286 20 10 chr10 131998760 131998858 -8317907 - L3 LINE CR1 -203 1374 1276 259 307 0 0 chr10 131998939 131999014 -8317751 + (CA)n Simple_repeat Simple_repeat 2 76 0 292 319 22 0 chr10 131999137 131999228 -8317537 - L3 LINE CR1 -442 1135 1043 191 296 183 0 chr10 131999238 131999309 -8317456 + MIR3 SINE MIR 119 202 -6 619 242 35 40 chr10 132003100 132003298 -8313467 - MIR3 SINE MIR -9 199 3 216 288 63 36 chr10 132003852 132003963 -8312802 - L2 LINE L2 -8 3305 3192 328 276 57 16 chr10 132004221 132004344 -8312421 - MIR SINE MIR -127 135 8 209 185 0 37 chr10 132005136 132005163 -8311602 + A-rich Low_complexity Low_complexity 4 30 -25 1981 131 3 0 chr10 132005163 132005453 -8311312 - AluSx SINE Alu -21 291 1 209 185 0 37 chr10 132005453 132005479 -8311286 + A-rich Low_complexity Low_complexity 30 55 0 663 264 165 15 chr10 132005531 132005932 -8310833 + L1ME4a LINE L1 5640 6100 -21 255 169 70 28 chr10 132007308 132007379 -8309386 + L2 LINE L2 3197 3270 -2 2351 85 0 0 chr10 132007504 132007811 -8308954 - AluSx SINE Alu -5 307 1 207 0 0 0 chr10 132007818 132007841 -8308924 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 23 33 0 0 chr10 132008794 132008824 -8307941 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 132009466 132009489 -8307276 + AT_rich Low_complexity Low_complexity 1 23 0 304 335 24 8 chr10 132009807 132009954 -8306811 + MIR SINE MIR 3 152 -56 528 305 69 17 chr10 132012523 132012697 -8304068 - MER5A DNA MER1_type 0 189 7 183 374 32 16 chr10 132013069 132013192 -8303573 - MIR SINE MIR -50 212 88 536 139 0 0 chr10 132013876 132013955 -8302810 + AluSg/x SINE Alu 208 286 -23 192 40 0 0 chr10 132014069 132014094 -8302671 + (A)n Simple_repeat Simple_repeat 1 25 0 2268 88 7 0 chr10 132014545 132014842 -8301923 + AluSc SINE Alu 2 300 -9 357 227 118 8 chr10 132015168 132015287 -8301478 + L2 LINE L2 3169 3300 -13 695 266 106 43 chr10 132016768 132017299 -8299466 + L1ME4a LINE L1 5557 6120 -1 208 186 0 23 chr10 132019913 132019956 -8296809 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 262 319 113 27 chr10 132020022 132020323 -8296442 + L2 LINE L2 2552 2878 -436 228 335 190 5 chr10 132020354 132020575 -8296190 + L2 LINE L2 2966 3227 -86 233 298 21 21 chr10 132021278 132021372 -8295393 + LTR67 LTR ERVL 461 554 -3 192 178 44 0 chr10 132023976 132024021 -8292744 + MIR SINE MIR 109 155 -107 2655 155 9 14 chr10 132024090 132024403 -8292362 + MSTB LTR MaLR 3 315 -111 2113 90 0 23 chr10 132024403 132024702 -8292063 - AluY SINE Alu -19 292 1 2655 155 9 14 chr10 132024702 132024814 -8291951 + MSTB LTR MaLR 315 426 0 965 260 160 11 chr10 132025622 132026286 -8290479 - L2 LINE L2 -2 3311 2544 280 310 14 0 chr10 132026687 132026758 -8290007 + MIR3 SINE MIR 99 170 -38 319 307 13 120 chr10 132026760 132027069 -8289696 + L2 LINE L2 2993 3268 -4 1951 117 0 7 chr10 132028810 132029093 -8287672 + AluSq SINE Alu 1 281 -32 472 295 71 31 chr10 132030200 132030424 -8286341 + MIR SINE MIR 13 245 -17 416 311 0 39 chr10 132030964 132031144 -8285621 + L1MC3 LINE L1 5714 5886 -1922 232 221 29 0 chr10 132031144 132031212 -8285553 + FAM SINE Alu 110 179 0 207 253 407 11 chr10 132032070 132032252 -8284513 - MIR SINE MIR 0 262 9 2568 221 44 11 chr10 132032290 132032901 -8283864 + L1MD1 LINE L1 5604 6234 -8 302 305 11 21 chr10 132032901 132032996 -8283769 + L1MC3 LINE L1 6074 6167 -1618 200 167 0 0 chr10 132033083 132033119 -8283646 + MIR SINE MIR 111 146 -62 200 125 0 0 chr10 132033091 132033123 -8283642 + MIR SINE MIR 118 149 -113 1449 184 17 37 chr10 132033123 132033422 -8283343 + AluJo SINE Alu 1 293 -19 1711 171 0 7 chr10 132033425 132033718 -8283047 + AluSx SINE Alu 1 291 -21 204 289 79 13 chr10 132033743 132033819 -8282946 + MIR SINE MIR 139 219 -43 219 218 26 64 chr10 132034419 132034497 -8282268 + C-rich Low_complexity Low_complexity 2 76 0 516 234 20 66 chr10 132034525 132034707 -8282058 - MIR SINE MIR -65 143 18 2490 52 3 0 chr10 132035832 132036137 -8280628 + AluY SINE Alu 2 307 -4 340 280 166 19 chr10 132036246 132036403 -8280362 - MIR SINE MIR -70 192 13 373 305 60 7 chr10 132038437 132038590 -8278175 + MIR3 SINE MIR 4 166 -42 253 294 0 0 chr10 132038619 132038687 -8278078 + MIR SINE MIR 70 137 -71 1486 184 40 3 chr10 132040119 132040418 -8276347 + AluJb SINE Alu 2 311 -1 2383 81 0 0 chr10 132041233 132041540 -8275225 + AluSq SINE Alu 1 307 -6 961 202 50 5 chr10 132041623 132041821 -8274944 + AluJb SINE Alu 84 290 -22 307 226 59 49 chr10 132042024 132042126 -8274639 - L2 LINE L2 0 3272 3170 1762 167 0 7 chr10 132042270 132042564 -8274201 + AluSx SINE Alu 1 292 -20 2474 99 22 6 chr10 132043314 132043677 -8273088 + L1MA5A LINE L1 5923 6291 -6 25 0 0 0 chr10 132043677 132043702 -8273063 + AT_rich Low_complexity Low_complexity 1 25 0 451 247 85 88 chr10 132044250 132044627 -8272138 + L2 LINE L2 2896 3271 -1 639 221 99 12 chr10 132047336 132047508 -8269257 + MER5A DNA MER1_type 1 187 -2 1515 144 4 0 chr10 132048390 132048633 -8268132 - AluJb SINE Alu -26 286 43 1062 108 6 6 chr10 132048802 132048959 -8267806 - AluSx SINE Alu -155 157 1 394 288 6 35 chr10 132049151 132049321 -8267444 + CT-rich Low_complexity Low_complexity 3 167 0 263 282 9 31 chr10 132049787 132049924 -8266841 + CT-rich Low_complexity Low_complexity 1 133 0 338 101 22 45 chr10 132049982 132050071 -8266694 + (TCTCC)n Simple_repeat Simple_repeat 3 89 0 209 268 72 41 chr10 132050263 132050360 -8266405 - L2 LINE L2 -64 3249 3150 1407 140 11 135 chr10 132050372 132050451 -8266314 - MLT1B LTR MaLR 0 390 303 1710 166 7 10 chr10 132050451 132050752 -8266013 + AluSx SINE Alu 5 304 -8 1407 140 11 135 chr10 132050752 132051021 -8265744 - MLT1B LTR MaLR -87 303 85 414 257 0 29 chr10 132052762 132052898 -8263867 - AluSg/x SINE Alu -21 289 158 3990 177 10 13 chr10 132053261 132054235 -8262530 + L1MA4A LINE L1 5031 6003 -300 1610 166 24 3 chr10 132054407 132054696 -8262069 - AluJo SINE Alu -17 295 1 262 268 29 22 chr10 132055296 132055434 -8261331 + CT-rich Low_complexity Low_complexity 5 143 0 761 313 34 34 chr10 132056359 132056682 -8260083 - MER102b DNA MER1_type 0 341 19 210 189 0 0 chr10 132057751 132057788 -8258977 + L2 LINE L2 3218 3254 -18 694 254 78 21 chr10 132059301 132059494 -8257271 + MER3 DNA MER1_type 6 209 0 1027 223 57 14 chr10 132059523 132059734 -8257031 - MER58A DNA MER1_type -1 223 4 452 316 38 0 chr10 132059743 132059876 -8256889 + MIR SINE MIR 50 187 -75 223 239 22 0 chr10 132059883 132059929 -8256836 + L2 LINE L2 3266 3312 -1 445 304 88 17 chr10 132059941 132060122 -8256643 - MIR SINE MIR -48 214 21 1704 97 119 11 chr10 132061262 132061530 -8255235 + AluSx SINE Alu 1 297 -15 388 214 8 34 chr10 132062648 132062765 -8254000 + L2 LINE L2 2945 3058 -214 186 182 0 0 chr10 132062860 132062893 -8253872 + L2 LINE L2 3261 3293 -20 316 297 39 54 chr10 132064388 132064621 -8252144 - MIR SINE MIR -19 243 15 256 365 90 0 chr10 132065698 132065854 -8250911 + MIR SINE MIR 88 257 -5 231 242 110 11 chr10 132066200 132066291 -8250474 + MIR3 SINE MIR 14 113 -95 700 213 11 77 chr10 132066921 132067104 -8249661 - MER5B DNA MER1_type -6 172 2 216 86 0 0 chr10 132067719 132067754 -8249011 + (A)n Simple_repeat Simple_repeat 1 35 0 329 244 104 17 chr10 132067889 132068004 -8248761 + MIR SINE MIR 1 125 -137 30 45 0 0 chr10 132072656 132072700 -8244065 + GC_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr10 132072711 132072747 -8244018 + GC_rich Low_complexity Low_complexity 1 36 0 211 85 21 43 chr10 132073014 132073061 -8243704 + (CGG)n Simple_repeat Simple_repeat 3 48 0 22 0 0 0 chr10 132073109 132073131 -8243634 + GC_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr10 132073218 132073253 -8243512 + GC_rich Low_complexity Low_complexity 1 35 0 2113 109 0 0 chr10 132075329 132075637 -8241128 + AluSx SINE Alu 1 308 0 239 157 20 0 chr10 132076740 132076791 -8239974 + (CATA)n Simple_repeat Simple_repeat 3 54 0 2001 131 3 6 chr10 132078591 132078904 -8237861 - AluSx SINE Alu 0 312 1 1228 193 18 22 chr10 132078909 132079184 -8237581 - L1MA6 LINE L1 -172 6128 5855 1194 106 0 32 chr10 132079792 132079980 -8236785 + AluSc SINE Alu 109 290 -19 1273 217 47 49 chr10 132079980 132080469 -8236296 - L1MDa LINE L1 -4698 1842 1355 400 225 53 26 chr10 132080507 132080658 -8236107 - L1MC5 LINE L1 -476 7485 7331 934 222 28 0 chr10 132080660 132080836 -8235929 + MER58A DNA MER1_type 2 182 -42 2101 110 0 13 chr10 132080836 132081153 -8235612 - AluYb8 SINE Alu -5 313 1 2345 66 0 35 chr10 132081159 132081478 -8235287 - AluY SINE Alu -3 308 1 297 185 0 0 chr10 132081695 132081749 -8235016 - Alu SINE Alu 0 308 255 186 150 0 0 chr10 132081773 132081813 -8234952 + (C)n Simple_repeat Simple_repeat 1 40 0 6196 114 14 36 chr10 132082044 132082072 -8234693 - Tigger1 DNA MER2_type -1016 1402 1375 2257 89 0 0 chr10 132082072 132082365 -8234400 + AluY SINE Alu 1 293 -18 6196 114 14 36 chr10 132082365 132082901 -8233864 - Tigger1 DNA MER2_type -1043 1375 867 2217 103 6 3 chr10 132082901 132083212 -8233553 - AluSx SINE Alu 0 312 1 6196 114 14 36 chr10 132083212 132083649 -8233116 - Tigger1 DNA MER2_type -1551 867 422 1787 128 16 19 chr10 132083669 132083981 -8232784 - AluSx SINE Alu -1 311 1 1981 138 0 3 chr10 132084480 132084784 -8231981 + AluJb SINE Alu 1 303 -9 2296 57 3 7 chr10 132084894 132085194 -8231571 - AluY SINE Alu -12 299 1 461 245 10 0 chr10 132085272 132085374 -8231391 + FLAM_A SINE Alu 26 128 -14 224 237 79 13 chr10 132085626 132085702 -8231063 - MIR SINE MIR -6 256 176 205 255 72 0 chr10 132085912 132086065 -8230700 + (TATAG)n Simple_repeat Simple_repeat 2 165 0 2425 52 0 16 chr10 132086076 132086386 -8230379 + AluY SINE Alu 1 305 -6 1843 148 0 26 chr10 132086605 132086908 -8229857 + AluJb SINE Alu 1 295 -17 2395 67 0 0 chr10 132086910 132087208 -8229557 + AluY SINE Alu 1 298 -13 698 167 9 0 chr10 132087441 132087555 -8229210 - MER8 DNA MER2_type 0 239 125 656 201 6 69 chr10 132087669 132087828 -8228937 + MLT1B LTR MaLR 1 149 -225 1266 109 0 109 chr10 132087855 132088184 -8228581 - AluSx SINE Alu -9 293 1 803 205 8 126 chr10 132088184 132088455 -8228310 + MLT1B LTR MaLR 138 390 0 213 321 74 0 chr10 132088455 132088536 -8228229 - MIR3 SINE MIR -34 174 88 22 0 0 0 chr10 132088552 132088574 -8228191 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr10 132090992 132091027 -8225738 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 132091219 132091242 -8225523 + (CA)n Simple_repeat Simple_repeat 2 24 0 413 333 50 17 chr10 132093369 132093594 -8223171 + MIR SINE MIR 3 236 -26 1915 141 10 3 chr10 132094693 132094999 -8221766 - AluSx SINE Alu -4 308 1 328 284 0 0 chr10 132095002 132095076 -8221689 - MIR SINE MIR -16 246 173 642 139 49 35 chr10 132095127 132095271 -8221494 + L1MB3 LINE L1 6036 6181 -2 1136 148 44 35 chr10 132095532 132095761 -8221004 + AluJb SINE Alu 60 290 -22 225 143 0 0 chr10 132095940 132095975 -8220790 + AluJb SINE Alu 1 35 -267 21 71 0 0 chr10 132096073 132096115 -8220650 + AT_rich Low_complexity Low_complexity 1 42 0 1594 146 11 25 chr10 132096159 132096439 -8220326 + AluJb SINE Alu 24 299 -13 21 0 0 0 chr10 132096698 132096719 -8220046 + AT_rich Low_complexity Low_complexity 1 21 0 239 205 0 0 chr10 132096947 132096986 -8219779 - MER57A LTR ERV1 -70 333 295 1303 163 5 5 chr10 132098734 132098949 -8217816 - AluSg/x SINE Alu -12 300 86 455 216 10 20 chr10 132099838 132099940 -8216825 - FLAM_A SINE Alu -20 122 22 707 119 0 0 chr10 132100027 132100128 -8216637 + HY3 scRNA scRNA 1 101 0 591 268 110 106 chr10 132100630 132100711 -8216054 - L2 LINE L2 0 3313 3234 2461 80 0 0 chr10 132100711 132101013 -8215752 + AluY SINE Alu 1 302 -9 591 268 110 106 chr10 132101013 132101063 -8215702 - L2 LINE L2 -79 3234 3186 2309 103 3 0 chr10 132101063 132101373 -8215392 + AluY SINE Alu 1 311 0 591 268 110 106 chr10 132101373 132101535 -8215230 - L2 LINE L2 -127 3186 3026 2426 97 0 0 chr10 132101535 132101846 -8214919 + AluSp SINE Alu 1 311 -2 591 268 110 106 chr10 132101846 132102148 -8214617 - L2 LINE L2 -287 3026 2698 967 147 0 0 chr10 132102158 132102294 -8214471 + AluSq/x SINE Alu 1 136 -177 1966 150 0 16 chr10 132102294 132102601 -8214164 + AluSx SINE Alu 1 302 -10 839 299 21 79 chr10 132102601 132102778 -8213987 - L2 LINE L2 -620 2694 2508 1784 169 36 0 chr10 132102778 132103079 -8213686 + AluJo SINE Alu 1 312 0 839 299 21 79 chr10 132103079 132103329 -8213436 - L2 LINE L2 -806 2508 2292 1110 143 24 57 chr10 132103336 132103517 -8213248 - Tigger1 DNA MER2_type 0 2418 2243 2300 105 3 0 chr10 132103517 132103822 -8212943 + AluSp SINE Alu 2 307 -6 1110 143 24 57 chr10 132103822 132103849 -8212916 - Tigger1 DNA MER2_type -175 2243 2217 506 198 0 0 chr10 132103852 132103938 -8212827 + AluS SINE Alu 2 87 -225 315 291 0 0 chr10 132104056 132104135 -8212630 - L2 LINE L2 -1025 2289 2211 2409 75 0 25 chr10 132104206 132104525 -8212240 + AluY SINE Alu 1 311 0 27 81 0 0 chr10 132104912 132104974 -8211791 + AT_rich Low_complexity Low_complexity 1 62 0 2135 61 0 15 chr10 132106042 132106303 -8210462 - AluY SINE Alu -14 297 41 311 326 63 36 chr10 132106582 132106628 -8210137 + L1MDa LINE L1 1267 1310 -5230 2286 93 0 26 chr10 132106628 132106938 -8209827 + AluSx SINE Alu 1 302 -10 311 326 63 36 chr10 132106938 132107112 -8209653 + L1MDa LINE L1 1310 1493 -5047 2308 114 3 0 chr10 132107120 132107427 -8209338 + AluSq SINE Alu 1 308 -5 1570 147 37 29 chr10 132107483 132107643 -8209122 - MER7A DNA MER2_type -2765 273 111 1757 131 19 64 chr10 132107643 132107955 -8208810 - AluJb SINE Alu -14 298 1 1570 147 37 29 chr10 132107955 132108066 -8208699 - MER7A DNA MER2_type -2927 111 2 1318 82 0 0 chr10 132108103 132108262 -8208503 + AluSg/x SINE Alu 72 230 -82 237 108 0 0 chr10 132108317 132108354 -8208411 + (CA)n Simple_repeat Simple_repeat 2 38 0 290 251 105 42 chr10 132108378 132108569 -8208196 + L1MDa LINE L1 1533 1735 -4805 1127 105 0 13 chr10 132108571 132108724 -8208041 + AluSx SINE Alu 7 157 -155 1599 177 0 8 chr10 132109724 132109989 -8206776 + AluJb SINE Alu 37 299 -13 290 248 93 65 chr10 132110349 132110369 -8206396 - L1MDa LINE L1 -4788 1752 1734 2247 112 3 0 chr10 132110369 132110673 -8206092 - AluSx SINE Alu -1 311 7 290 248 93 65 chr10 132110673 132110866 -8205899 - L1MDa LINE L1 -4806 1734 1533 237 108 0 0 chr10 132110890 132110927 -8205838 + (TG)n Simple_repeat Simple_repeat 2 38 0 2266 64 53 0 chr10 132111377 132111658 -8205107 - AluY SINE Alu -15 296 1 1163 133 0 6 chr10 132111695 132111868 -8204897 + AluSg/x SINE Alu 133 304 -6 560 166 61 3 chr10 132112003 132112167 -8204598 + AluJb SINE Alu 83 303 -9 524 303 19 0 chr10 132112167 132112329 -8204436 + L1ME3A LINE L1 5993 6157 -13 21 0 0 0 chr10 132113119 132113140 -8203625 + AT_rich Low_complexity Low_complexity 1 21 0 280 288 119 69 chr10 132113147 132113307 -8203458 - MIR3 SINE MIR -14 194 27 1591 181 10 23 chr10 132113899 132114202 -8202563 + AluJo SINE Alu 14 312 0 2284 75 0 14 chr10 132114309 132114603 -8202162 - AluSc SINE Alu -18 291 2 2486 51 0 7 chr10 132115180 132115476 -8201289 - AluSc SINE Alu -15 294 1 2280 51 3 27 chr10 132116916 132117105 -8199660 - AluSp SINE Alu 0 318 138 2475 49 0 10 chr10 132117105 132117409 -8199356 - AluY SINE Alu -10 301 1 2280 51 3 27 chr10 132117409 132117544 -8199221 - AluSp SINE Alu -180 138 1 2367 84 3 3 chr10 132117994 132118293 -8198472 + AluSc SINE Alu 1 299 -10 2337 107 0 0 chr10 132118331 132118640 -8198125 + AluSx SINE Alu 1 309 -3 2140 66 4 7 chr10 132118812 132119085 -8197680 + AluY SINE Alu 1 272 -39 1074 124 0 0 chr10 132119089 132119242 -8197523 + AluSg/x SINE Alu 160 312 0 312 231 37 65 chr10 132119311 132119419 -8197346 + MIR SINE MIR 158 262 0 26 0 0 0 chr10 132119442 132119468 -8197297 + AT_rich Low_complexity Low_complexity 1 26 0 2299 80 27 3 chr10 132119478 132119778 -8196987 + AluSg SINE Alu 1 307 -3 5831 83 60 37 chr10 132119780 132120679 -8196086 - L1MA1 LINE L1 -8 6294 5375 300 280 80 48 chr10 132121196 132121321 -8195444 + MIR SINE MIR 22 150 -112 226 344 0 0 chr10 132121557 132121650 -8195115 - MIR SINE MIR 0 262 170 227 307 0 44 chr10 132122280 132122417 -8194348 + CT-rich Low_complexity Low_complexity 1 131 0 851 136 0 8 chr10 132123854 132123979 -8192786 + AluSg/x SINE Alu 162 285 -27 405 0 0 0 chr10 132123986 132124031 -8192734 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1462 164 25 85 chr10 132124138 132124456 -8192309 - AluJb SINE Alu -13 299 1 771 310 25 9 chr10 132124521 132124847 -8191918 - L1M4 LINE L1 -2252 3894 3564 288 0 0 0 chr10 132126382 132126414 -8190351 + (CA)n Simple_repeat Simple_repeat 1 32 0 210 91 0 0 chr10 132126597 132126630 -8190135 + (CA)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr10 132128091 132128113 -8188652 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 882 209 0 0 chr10 132128133 132128296 -8188469 - FRAM SINE Alu 0 166 4 227 30 0 30 chr10 132128303 132128336 -8188429 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1211 217 53 8 chr10 132128342 132128605 -8188160 - AluJo SINE Alu -31 281 7 863 223 14 19 chr10 132128663 132128878 -8187887 - AluJo SINE Alu -98 214 1 191 297 0 16 chr10 132129459 132129523 -8187242 - L2 LINE L2 0 3272 3210 1395 226 0 3 chr10 132129700 132129983 -8186782 + AluJo SINE Alu 1 282 -30 1834 131 0 32 chr10 132130292 132130604 -8186161 - AluY SINE Alu -4 307 6 222 283 0 0 chr10 132130694 132130747 -8186018 + L2 LINE L2 2225 2277 -1037 2326 155 45 86 chr10 132130756 132131164 -8185601 + Tigger1 DNA MER2_type 1 385 -2033 1499 158 6 104 chr10 132131164 132131499 -8185266 + AluSx SINE Alu 1 302 -10 2326 155 45 86 chr10 132131499 132131601 -8185164 + Tigger1 DNA MER2_type 385 490 -1928 1736 172 28 0 chr10 132131788 132132079 -8184686 + AluJo SINE Alu 1 299 -13 2452 63 0 66 chr10 132132339 132132673 -8184092 + AluSx SINE Alu 1 312 0 381 207 11 0 chr10 132132676 132132763 -8184002 + L1MDa LINE L1 1905 1992 -4548 1926 121 0 16 chr10 132132955 132133268 -8183497 - AluSg SINE Alu 0 310 3 24 0 0 0 chr10 132133282 132133306 -8183459 + AT_rich Low_complexity Low_complexity 1 24 0 333 238 40 56 chr10 132133329 132133455 -8183310 - MIR SINE MIR 0 262 139 23 0 0 0 chr10 132133503 132133526 -8183239 + AT_rich Low_complexity Low_complexity 1 23 0 677 189 0 8 chr10 132133535 132133662 -8183103 - AluSg/x SINE Alu -27 285 160 905 188 5 10 chr10 132133665 132133857 -8182908 - AluY SINE Alu -38 273 83 1445 121 0 0 chr10 132133969 132134168 -8182597 + AluSq SINE Alu 110 308 -5 1419 167 36 43 chr10 132134224 132134384 -8182381 - MER7A DNA MER2_type -2765 273 116 1593 146 19 65 chr10 132134384 132134692 -8182073 - AluJb SINE Alu -14 298 5 1419 167 36 43 chr10 132134692 132134807 -8181958 - MER7A DNA MER2_type -2922 116 2 791 165 13 6 chr10 132134844 132135002 -8181763 + AluSq SINE Alu 72 230 -83 618 185 164 14 chr10 132135262 132135408 -8181357 - FRAM SINE Alu -4 172 5 249 347 42 0 chr10 132135413 132135508 -8181257 + L2 LINE L2 3210 3308 -5 1372 161 0 24 chr10 132135808 132136056 -8180709 + AluJo SINE Alu 1 242 -70 639 104 10 10 chr10 132136064 132136160 -8180605 + AluS SINE Alu 5 100 -212 1929 155 0 26 chr10 132136335 132136638 -8180127 + AluJb SINE Alu 1 295 -17 2542 83 0 0 chr10 132136640 132136953 -8179812 + AluSp SINE Alu 1 313 0 2167 82 18 4 chr10 132137068 132137375 -8179390 - AluSx SINE Alu 0 311 1 691 140 0 0 chr10 132137441 132137541 -8179224 - MER30 DNA MER1_type 0 230 131 1640 70 0 0 chr10 132137541 132137740 -8179025 - AluSp SINE Alu -12 301 103 1449 216 3 10 chr10 132138967 132139268 -8177497 - AluJo SINE Alu -13 299 1 1690 154 23 26 chr10 132139712 132140018 -8176747 + AluJo SINE Alu 4 308 -4 926 281 36 67 chr10 132140029 132140099 -8176666 + L1M4 LINE L1 876 947 -5449 2432 77 3 10 chr10 132140099 132140411 -8176354 + AluY SINE Alu 1 310 -1 926 281 36 67 chr10 132140411 132140952 -8175813 + L1M4 LINE L1 947 1468 -4928 1809 134 0 23 chr10 132140954 132141253 -8175512 + AluSx SINE Alu 1 292 -20 1531 94 24 147 chr10 132141430 132141771 -8174994 + AluYb8 SINE Alu 1 299 -9 699 140 84 0 chr10 132142517 132142624 -8174141 + AluSx SINE Alu 3 118 -195 1441 166 4 15 chr10 132142624 132142883 -8173882 + AluSp SINE Alu 30 285 -28 741 238 0 0 chr10 132142904 132143064 -8173701 + AluSx SINE Alu 123 282 -28 24 0 0 0 chr10 132143235 132143259 -8173506 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 132143310 132143332 -8173433 + AT_rich Low_complexity Low_complexity 1 22 0 2484 156 30 5 chr10 132143441 132143872 -8172893 + L1MC1 LINE L1 5555 5996 -337 196 244 122 0 chr10 132144056 132144146 -8172619 + MIR SINE MIR 22 122 -140 1124 196 117 6 chr10 132144163 132144479 -8172286 - L1ME2 LINE L1 0 6164 5814 1539 179 43 7 chr10 132144495 132144775 -8171990 - AluJo SINE Alu -20 292 3 1230 190 0 8 chr10 132144812 132145059 -8171706 - AluSx SINE Alu -63 249 5 261 281 31 16 chr10 132145070 132145198 -8171567 - L1ME2 LINE L1 -393 5771 5642 241 309 66 33 chr10 132145310 132145491 -8171274 + LTR16B LTR ERVL 126 312 -152 1118 89 0 129 chr10 132145626 132145828 -8170937 + AluSg/x SINE Alu 135 310 0 877 233 93 84 chr10 132145831 132146402 -8170363 + L1M4 LINE L1 1580 2155 -4060 549 141 0 0 chr10 132146408 132146493 -8170272 + AluSq SINE Alu 2 86 -226 2561 59 0 0 chr10 132146493 132146796 -8169969 + AluY SINE Alu 1 303 -8 1706 93 0 4 chr10 132146796 132147019 -8169746 + AluSq SINE Alu 73 296 -17 805 211 66 9 chr10 132147029 132147256 -8169509 + L1M4 LINE L1 2198 2437 -3959 * 1159 175 0 111 chr10 132147255 132147331 -8169434 + L1M4 LINE L1 5516 5599 -648 1991 144 0 10 chr10 132147331 132147637 -8169128 - AluSx SINE Alu -9 303 1 1159 175 0 111 chr10 132147637 132147840 -8168925 + L1M4 LINE L1 5599 5764 -483 488 227 0 9 chr10 132147840 132147950 -8168815 - AluJb SINE Alu -14 298 190 3967 145 44 18 chr10 132148053 132148735 -8168030 + Tigger1 DNA MER2_type 1527 2226 -192 2209 107 0 3 chr10 132148735 132149026 -8167739 - AluSg SINE Alu -20 290 1 929 140 0 15 chr10 132149026 132149162 -8167603 - AluSq/x SINE Alu -178 134 1 1140 139 24 57 chr10 132149164 132149191 -8167574 + Tigger1 DNA MER2_type 2217 2243 -175 2404 92 3 0 chr10 132149191 132149496 -8167269 - AluSp SINE Alu -6 307 2 1140 139 24 57 chr10 132149496 132149677 -8167088 + Tigger1 DNA MER2_type 2243 2418 0 712 259 25 112 chr10 132149683 132149933 -8166832 + L2 LINE L2 2291 2496 -818 1550 195 38 0 chr10 132149933 132150225 -8166540 - AluJo SINE Alu 0 312 10 712 259 25 112 chr10 132150225 132150368 -8166397 + L2 LINE L2 2496 2650 -664 968 99 0 0 chr10 132150468 132150589 -8166176 + AluY SINE Alu 170 290 -21 8263 129 30 44 chr10 132150589 132151128 -8165637 - Tigger1 DNA MER2_type -1033 1385 840 2347 103 6 3 chr10 132151128 132151439 -8165326 - AluSx SINE Alu 0 312 1 8263 129 30 44 chr10 132151439 132151896 -8164869 - Tigger1 DNA MER2_type -1578 840 412 1682 132 6 112 chr10 132151896 132152244 -8164521 - AluSx SINE Alu -1 311 1 8263 129 30 44 chr10 132152244 132152651 -8164114 - Tigger1 DNA MER2_type -2006 412 1 316 274 0 0 chr10 132152653 132152726 -8164039 - L2 LINE L2 -1031 2283 2211 2320 86 0 25 chr10 132152802 132153116 -8163649 + AluY SINE Alu 5 310 -1 27 81 0 0 chr10 132153503 132153565 -8163200 + AT_rich Low_complexity Low_complexity 1 62 0 348 164 0 0 chr10 132154396 132154474 -8162291 - AluJo SINE Alu 0 302 234 2066 135 3 10 chr10 132154474 132154777 -8161988 - AluSx SINE Alu -11 301 1 1626 136 0 20 chr10 132154777 132155028 -8161737 - AluJo SINE Alu -66 246 1 513 282 28 86 chr10 132155328 132155424 -8161341 - L2 LINE L2 -5 3308 3208 503 239 0 63 chr10 132155424 132155566 -8161199 + FLAM_A SINE Alu 1 133 0 513 282 28 86 chr10 132155566 132155795 -8160970 - L2 LINE L2 -105 3208 3002 498 312 21 16 chr10 132155795 132156091 -8160674 - LTR16A LTR ERVL 0 450 100 589 305 23 35 chr10 132156159 132156473 -8160292 - L2 LINE L2 -312 3001 2635 754 236 72 29 chr10 132156474 132156682 -8160083 - MER20 DNA MER1_type -2 217 1 1340 110 81 76 chr10 132156889 132157125 -8159640 - AluSx SINE Alu -3 309 73 2081 89 40 9 chr10 132157125 132157514 -8159251 + LTR7 LTR ERV1 1 449 -1 409 71 12 95 chr10 132157514 132157598 -8159167 - AluSx SINE Alu -234 78 2 2345 86 0 0 chr10 132157611 132157913 -8158852 - AluY SINE Alu -9 302 1 2633 61 0 0 chr10 132157925 132158236 -8158529 - AluSp SINE Alu -2 311 1 666 199 7 91 chr10 132160186 132160317 -8156448 - MER58B DNA MER1_type -2095 325 185 2142 90 4 0 chr10 132160317 132160584 -8156181 + AluSp SINE Alu 1 268 -45 666 199 7 91 chr10 132160584 132160687 -8156078 - MER58B DNA MER1_type -2235 185 2 707 202 0 0 chr10 132160781 132160900 -8155865 - FLAM_C SINE Alu -14 119 1 625 166 159 0 chr10 132160961 132161124 -8155641 - MER53 DNA DNA 0 189 1 2271 121 0 3 chr10 132161399 132161712 -8155053 - AluSx SINE Alu 0 312 1 2152 17 0 4 chr10 132162409 132162648 -8154117 + AluYb8 SINE Alu 68 305 -13 1052 248 60 9 chr10 132162782 132163117 -8153648 - L2 LINE L2 -4 3309 2958 2477 69 3 22 chr10 132163309 132163626 -8153139 + AluY SINE Alu 1 311 0 2654 46 0 3 chr10 132164322 132164629 -8152136 + AluY SINE Alu 2 307 -4 2028 63 0 0 chr10 132164661 132164898 -8151867 + AluSq SINE Alu 1 237 -76 2534 50 0 3 chr10 132165469 132165766 -8150999 - AluY SINE Alu -15 296 1 2540 86 0 0 chr10 132166139 132166452 -8150313 + AluSp SINE Alu 1 313 0 2123 89 18 4 chr10 132166569 132166876 -8149889 - AluSx SINE Alu 0 311 1 1410 98 54 27 chr10 132166942 132167042 -8149723 - MER30 DNA MER1_type 0 230 134 2485 76 0 0 chr10 132167042 132167343 -8149422 - AluSp SINE Alu -12 301 1 1410 98 54 27 chr10 132167343 132167466 -8149299 - MER30 DNA MER1_type -96 134 1 1673 196 3 3 chr10 132167536 132167827 -8148938 + AluJo SINE Alu 3 293 -19 2291 102 0 0 chr10 132167873 132168167 -8148598 - AluSc SINE Alu -11 298 5 654 194 13 32 chr10 132168307 132168462 -8148303 - AluSg/x SINE Alu -5 307 156 2303 74 27 3 chr10 132169274 132169570 -8147195 + AluY SINE Alu 3 305 -6 2275 92 0 35 chr10 132169780 132170095 -8146670 + AluY SINE Alu 1 304 -7 2199 95 3 7 chr10 132170104 132170411 -8146354 - AluSp SINE Alu 0 306 1 1840 158 28 0 chr10 132170703 132170994 -8145771 + AluJo SINE Alu 1 299 -13 2364 90 3 0 chr10 132171254 132171553 -8145212 + AluSx SINE Alu 1 300 -12 2180 116 7 0 chr10 132172321 132172624 -8144141 - AluSq SINE Alu -8 305 1 2026 123 38 7 chr10 132172682 132172975 -8143790 - AluSx SINE Alu -10 302 1 189 0 0 0 chr10 132172975 132172996 -8143769 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 2192 106 11 0 chr10 132172997 132173279 -8143486 - AluSg SINE Alu -25 285 1 654 87 78 0 chr10 132173294 132173397 -8143368 - HY1 scRNA scRNA -1 111 1 2433 71 0 7 chr10 132173531 132173828 -8142937 - AluY SINE Alu -16 295 1 2494 68 0 13 chr10 132174227 132174535 -8142230 - AluSg SINE Alu -6 304 1 727 176 74 27 chr10 132175327 132175475 -8141290 - MER44D DNA MER2_type 0 705 551 424 118 284 10 chr10 132175480 132175582 -8141183 - MER44D DNA MER2_type -209 400 1 2506 80 0 0 chr10 132176449 132176751 -8140014 + AluY SINE Alu 1 302 -9 516 286 53 35 chr10 132176764 132176935 -8139830 - MIR3 SINE MIR -19 189 16 287 287 129 10 chr10 132177133 132177234 -8139531 + MIR SINE MIR 37 149 -113 997 115 0 19 chr10 132177981 132178137 -8138628 + AluSg/x SINE Alu 156 308 -4 2120 113 27 13 chr10 132178808 132179108 -8137657 - AluSx SINE Alu -8 304 1 1942 158 3 3 chr10 132179236 132179546 -8137219 - AluJb SINE Alu -1 311 2 587 263 81 49 chr10 132179566 132179619 -8137146 + L1P4 LINE L1 5315 5365 -801 2129 124 0 7 chr10 132179619 132179925 -8136840 + AluY SINE Alu 1 304 -7 587 263 81 49 chr10 132179925 132180175 -8136590 + L1P4 LINE L1 5365 5631 -535 497 270 130 20 chr10 132180227 132180427 -8136338 - MIR SINE MIR -17 245 24 400 278 128 59 chr10 132180468 132180655 -8136110 + L1MC4a LINE L1 5729 5930 -312 2269 107 3 0 chr10 132180845 132181143 -8135622 + AluSx SINE Alu 1 299 -13 1562 165 68 0 chr10 132182244 132182536 -8134229 - AluJo SINE Alu 0 310 1 2028 128 26 7 chr10 132182589 132182893 -8133872 + AluSx SINE Alu 2 311 -1 2250 113 13 3 chr10 132183373 132183674 -8133091 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 132183963 132183984 -8132781 + AT_rich Low_complexity Low_complexity 1 21 0 385 311 25 0 chr10 132184109 132184228 -8132537 - MER5A DNA MER1_type -5 184 63 237 286 18 0 chr10 132184224 132184280 -8132485 + MER5A DNA MER1_type 107 163 -26 * 588 209 72 13 chr10 132184397 132184413 -8132352 - L1MA10 LINE L1 -2 6332 6317 1381 245 82 32 chr10 132184413 132184878 -8131887 - L1ME2 LINE L1 -10 6154 5667 2028 102 69 0 chr10 132185166 132185441 -8131324 + AluSc SINE Alu 1 294 -15 1983 95 4 11 chr10 132185497 132185759 -8131006 - AluSx SINE Alu -15 297 38 759 191 68 12 chr10 132186517 132186679 -8130086 - FRAM SINE Alu 0 176 6 2123 93 7 31 chr10 132186696 132187008 -8129757 - AluSx SINE Alu 0 305 1 203 329 0 14 chr10 132188258 132188328 -8128437 - L2 LINE L2 -2 3270 3202 1875 176 0 3 chr10 132188497 132188799 -8127966 + AluJo SINE Alu 1 301 -11 2177 95 29 44 chr10 132190177 132190493 -8126272 - AluSx SINE Alu -1 311 1 2252 106 10 0 chr10 132190897 132191198 -8125567 + AluSx SINE Alu 1 304 -8 2456 97 0 0 chr10 132191200 132191510 -8125255 + AluSg SINE Alu 1 310 0 1929 137 17 10 chr10 132191519 132191812 -8124953 + AluJb SINE Alu 1 295 -17 278 198 129 10 chr10 132192003 132192104 -8124661 + L1ME4a LINE L1 5998 6110 -11 304 261 56 83 chr10 132192476 132192656 -8124109 + MIR SINE MIR 23 197 -65 23 0 0 0 chr10 132193982 132194005 -8122760 + AT_rich Low_complexity Low_complexity 1 23 0 371 188 86 26 chr10 132196307 132196424 -8120341 + L1ME4a LINE L1 5697 5820 -301 840 123 0 0 chr10 132196451 132196565 -8120200 + AluJb SINE Alu 5 118 -194 2251 94 7 0 chr10 132196589 132196875 -8119890 + AluSx SINE Alu 11 298 -14 292 186 78 70 chr10 132196974 132197103 -8119662 + L1ME4a LINE L1 5962 6091 -30 2344 104 0 0 chr10 132197560 132197859 -8118906 - AluSx SINE Alu -13 299 1 2355 86 3 3 chr10 132198153 132198457 -8118308 + AluSx SINE Alu 1 304 -8 2417 66 0 0 chr10 132198684 132198970 -8117795 - AluSx SINE Alu -26 286 1 1738 156 48 0 chr10 132199155 132199448 -8117317 - AluJo SINE Alu 0 306 1 2296 84 0 20 chr10 132199474 132199772 -8116993 + AluSq SINE Alu 1 292 -21 2118 110 10 0 chr10 132199919 132200210 -8116555 - AluSg SINE Alu -16 294 1 460 255 102 9 chr10 132200210 132200426 -8116339 + L1MC4 LINE L1 7806 8041 -1 1559 91 24 147 chr10 132200589 132200930 -8115835 + AluYb8 SINE Alu 1 299 -9 1773 142 71 3 chr10 132201676 132201783 -8114982 + AluSx SINE Alu 3 101 -211 2075 89 4 0 chr10 132201783 132202066 -8114699 + AluSp SINE Alu 30 313 0 1773 142 71 3 chr10 132202066 132202238 -8114527 + AluSx SINE Alu 101 303 -9 22 0 0 0 chr10 132202464 132202486 -8114279 + AT_rich Low_complexity Low_complexity 1 22 0 2360 90 20 0 chr10 132202576 132202877 -8113888 + AluSq SINE Alu 1 307 -6 2574 62 0 0 chr10 132203032 132203340 -8113425 - AluY SINE Alu -3 308 1 1225 89 6 0 chr10 132203426 132203583 -8113182 + AluY SINE Alu 130 287 -24 759 191 68 12 chr10 132204386 132204548 -8112217 - FRAM SINE Alu 0 176 6 2123 93 7 31 chr10 132204565 132204877 -8111888 - AluSx SINE Alu 0 305 1 203 329 0 14 chr10 132206127 132206197 -8110568 - L2 LINE L2 -2 3270 3202 1875 176 0 3 chr10 132206366 132206668 -8110097 + AluJo SINE Alu 1 301 -11 2162 96 29 45 chr10 132208046 132208360 -8108405 - AluSx SINE Alu -3 309 1 2252 106 10 0 chr10 132208764 132209065 -8107700 + AluSx SINE Alu 1 304 -8 2477 93 0 0 chr10 132209067 132209377 -8107388 + AluSg SINE Alu 1 310 0 1914 140 17 10 chr10 132209386 132209679 -8107086 + AluJb SINE Alu 1 295 -17 278 198 129 10 chr10 132209870 132209971 -8106794 + L1ME4a LINE L1 5998 6110 -11 304 261 56 83 chr10 132210343 132210523 -8106242 + MIR SINE MIR 23 197 -65 23 0 0 0 chr10 132211849 132211872 -8104893 + AT_rich Low_complexity Low_complexity 1 23 0 371 188 86 26 chr10 132214173 132214290 -8102475 + L1ME4a LINE L1 5697 5820 -301 840 123 0 0 chr10 132214317 132214431 -8102334 + AluJb SINE Alu 5 118 -194 2251 94 7 0 chr10 132214455 132214741 -8102024 + AluSx SINE Alu 11 298 -14 292 186 78 70 chr10 132214840 132214969 -8101796 + L1ME4a LINE L1 5962 6091 -30 2469 80 0 0 chr10 132215426 132215725 -8101040 - AluSx SINE Alu -13 299 1 2083 84 0 4 chr10 132215760 132216021 -8100744 - AluSq SINE Alu -53 260 1 903 210 13 0 chr10 132216037 132216194 -8100571 + AluJb SINE Alu 131 289 -23 312 282 0 47 chr10 132216196 132216281 -8100484 - Charlie5 DNA MER1_type -2531 81 1 2307 106 0 3 chr10 132216285 132216588 -8100177 - AluSx SINE Alu -10 302 1 2016 128 7 0 chr10 132216620 132216918 -8099847 + AluSq SINE Alu 1 300 -13 646 259 45 32 chr10 132217135 132217382 -8099383 - MIR SINE MIR 0 262 13 395 174 196 0 chr10 132218040 132218132 -8098633 + MER81 DNA DNA 4 113 -1 972 135 0 0 chr10 132218398 132218531 -8098234 + AluJo/FLAM SINE Alu 1 133 -179 2379 73 0 0 chr10 132218532 132218820 -8097945 - AluY SINE Alu -19 292 5 22 0 0 0 chr10 132218825 132218847 -8097918 + AT_rich Low_complexity Low_complexity 1 22 0 2356 76 21 0 chr10 132218903 132219191 -8097574 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 132219281 132219303 -8097462 + AT_rich Low_complexity Low_complexity 1 22 0 1715 149 71 3 chr10 132219529 132219701 -8097064 - AluSx SINE Alu -9 303 144 185 0 40 0 chr10 132219701 132219726 -8097039 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2074 89 4 0 chr10 132219727 132219984 -8096781 - AluSp SINE Alu -26 287 30 1715 149 71 3 chr10 132219984 132220091 -8096674 - AluSx SINE Alu -167 145 3 1722 158 4 0 chr10 132220839 132221098 -8095667 + AluSx SINE Alu 49 308 -4 257 256 0 0 chr10 132221628 132221710 -8095055 + C-rich Low_complexity Low_complexity 1 82 0 204 422 0 0 chr10 132221767 132221883 -8094882 + C-rich Low_complexity Low_complexity 1 116 0 * 394 268 12 26 chr10 132221816 132222252 -8094513 + CT-rich Low_complexity Low_complexity 1 429 0 2053 62 8 8 chr10 132222409 132222669 -8094096 - AluY SINE Alu -51 260 1 216 81 32 81 chr10 132222789 132222851 -8093914 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 350 327 6 41 chr10 132222896 132223100 -8093665 + CT-rich Low_complexity Low_complexity 1 196 0 233 188 0 55 chr10 132223160 132223288 -8093477 + T-rich Low_complexity Low_complexity 2 122 0 310 308 13 22 chr10 132223289 132223509 -8093256 + CT-rich Low_complexity Low_complexity 1 217 0 215 187 11 33 chr10 132223529 132223620 -8093145 + CT-rich Low_complexity Low_complexity 2 90 0 580 261 48 5 chr10 132223737 132223925 -8092840 + L2 LINE L2 3114 3309 -4 300 100 0 0 chr10 132226210 132226250 -8090515 - U2 snRNA snRNA -147 41 2 543 208 0 0 chr10 132226404 132226500 -8090265 - FRAM SINE Alu -80 96 1 323 316 72 47 chr10 132227852 132228130 -8088635 + AluSx SINE Alu 9 293 -9 333 167 0 0 chr10 132228458 132228506 -8088259 - Alu SINE Alu -254 48 1 1784 164 21 0 chr10 132228914 132229200 -8087565 - AluSq SINE Alu -21 292 1 365 314 121 29 chr10 132229668 132229694 -8087071 - MIR SINE MIR -20 242 220 2070 139 0 13 chr10 132229694 132230010 -8086755 - AluSx SINE Alu 0 312 1 365 314 121 29 chr10 132230010 132230190 -8086575 - MIR SINE MIR -42 220 17 240 343 9 29 chr10 132230912 132231017 -8085748 - L2 LINE L2 -205 3067 2965 182 396 39 27 chr10 132231107 132231367 -8085398 - L2 LINE L2 -498 2816 2554 226 133 0 22 chr10 132232070 132232115 -8084650 - LTR66 LTR ERVL -163 447 404 224 98 0 24 chr10 132232126 132232167 -8084598 + (TA)n Simple_repeat Simple_repeat 2 41 0 260 319 0 0 chr10 132232454 132232523 -8084242 + MER82 DNA MER2_type 2 70 -583 423 0 0 0 chr10 132232565 132232612 -8084153 + (TA)n Simple_repeat Simple_repeat 2 48 0 2051 229 32 5 chr10 132232612 132233049 -8083716 + MER82 DNA MER2_type 205 653 0 196 297 0 0 chr10 132233055 132233129 -8083636 + L2 LINE L2 3159 3232 -81 5910 175 30 15 chr10 132234047 132235200 -8081565 - Tigger1 DNA MER2_type -12 2406 1236 1233 143 36 43 chr10 132235353 132235633 -8081132 - AluSx SINE Alu -27 285 8 1950 188 21 16 chr10 132235874 132236262 -8080503 + MLT1B LTR MaLR 1 390 0 211 217 6 0 chr10 132238581 132238636 -8078129 - MIR SINE MIR -85 123 68 1347 157 0 88 chr10 132240391 132240710 -8076055 - AluJb SINE Alu 0 312 22 1976 112 14 27 chr10 132241562 132241856 -8074909 - AluSx SINE Alu -22 290 1 673 236 28 0 chr10 132242328 132242472 -8074293 - MER20 DNA MER1_type -5 214 67 2160 92 34 0 chr10 132242665 132242958 -8073807 - AluSq SINE Alu -9 304 2 1288 255 125 36 chr10 132243335 132243563 -8073202 + L1ME LINE L1 5032 5238 -932 1528 194 121 8 chr10 132243563 132243919 -8072846 + MSTD LTR MaLR 1 396 0 1288 255 125 36 chr10 132243919 132244405 -8072360 + L1ME LINE L1 5238 5815 -355 2634 47 0 0 chr10 132246313 132246613 -8070152 + AluY SINE Alu 1 300 -11 2120 127 0 29 chr10 132247168 132247483 -8069282 + AluSx SINE Alu 1 306 -6 2213 211 93 42 chr10 132249276 132249990 -8066775 + L1MC4 LINE L1 6241 6359 0 2122 128 7 3 chr10 132250893 132251198 -8065567 - AluSx SINE Alu -6 306 1 182 200 12 88 chr10 132251263 132251343 -8065422 + L2 LINE L2 3015 3088 -184 1157 152 77 146 chr10 132251942 132252088 -8064677 - AluJo SINE Alu -1 301 187 2051 109 7 3 chr10 132252088 132252390 -8064375 - AluSx SINE Alu -9 303 1 1157 152 77 146 chr10 132252390 132252566 -8064199 - AluJo SINE Alu -115 187 1 862 148 7 13 chr10 132254402 132254551 -8062214 + MLT1A1 LTR MaLR 3 150 -215 1215 119 0 55 chr10 132254564 132254765 -8062000 + AluSq SINE Alu 6 195 -118 858 235 0 0 chr10 132254778 132254944 -8061821 + FRAM SINE Alu 1 166 0 982 185 101 0 chr10 132254948 132255137 -8061628 + MLT1A1 LTR MaLR 158 365 0 2143 106 10 0 chr10 132255376 132255679 -8061086 - AluSx SINE Alu -6 306 1 193 207 172 35 chr10 132256118 132256205 -8060560 - L3 LINE CR1 -175 1402 1304 239 255 0 0 chr10 132258039 132258086 -8058679 + L2 LINE L2 3214 3260 -12 304 196 0 0 chr10 132258481 132258527 -8058238 + Alu SINE Alu 1 46 -253 568 102 23 0 chr10 132258529 132258617 -8058148 + AluJ/FRAM SINE Alu 216 305 -7 22 0 0 0 chr10 132258765 132258787 -8057978 + AT_rich Low_complexity Low_complexity 1 22 0 1673 178 0 7 chr10 132258801 132259099 -8057666 + AluJb SINE Alu 7 302 -10 250 182 0 0 chr10 132259439 132259483 -8057282 + AluJ/FLAM SINE Alu 36 79 -223 510 84 32 221 chr10 132259485 132259528 -8057237 + L1MC3 LINE L1 7621 7670 -115 1907 113 7 10 chr10 132259528 132259830 -8056935 + AluSc SINE Alu 1 301 -8 510 84 32 221 chr10 132259830 132259868 -8056897 + L1MC3 LINE L1 7670 7714 -71 692 235 13 0 chr10 132259868 132260047 -8056718 + FRAM SINE Alu 1 45 0 510 84 32 221 chr10 132260047 132260126 -8056639 + L1MC3 LINE L1 7714 7745 -40 1567 134 130 0 chr10 132260126 132260387 -8056378 - AluSg SINE Alu -5 295 1 510 84 32 221 chr10 132260387 132260413 -8056352 + L1MC3 LINE L1 7745 7774 -11 477 76 48 6 chr10 132261533 132261744 -8055021 + AluSg SINE Alu 45 295 -14 1078 211 11 19 chr10 132261790 132262051 -8054714 + AluSq SINE Alu 1 259 -54 1487 204 25 48 chr10 132262606 132263048 -8053717 - L1M4 LINE L1 -1202 4944 4513 264 182 296 0 chr10 132263047 132263135 -8053630 - L1M4 LINE L1 -2299 3847 3734 * 600 207 41 55 chr10 132263631 132263776 -8052989 - AluSq/x SINE Alu -164 149 7 277 227 93 47 chr10 132266921 132267071 -8049694 - L2 LINE L2 -439 2875 2719 330 132 0 0 chr10 132269155 132269208 -8047557 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr10 132269855 132269876 -8046889 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 132270249 132270277 -8046488 + AT_rich Low_complexity Low_complexity 1 28 0 1058 221 20 4 chr10 132272676 132272929 -8043836 - AluJb SINE Alu -55 257 1 2295 77 0 13 chr10 132272934 132273234 -8043531 - AluSc SINE Alu -13 296 1 930 246 74 31 chr10 132273528 132273881 -8042884 + MLT1A2 LTR MaLR 4 371 -3 219 327 132 52 chr10 132274788 132274864 -8041901 + L2 LINE L2 2673 2741 -531 1477 178 30 20 chr10 132274864 132275162 -8041603 + AluJb SINE Alu 1 301 -11 219 327 132 52 chr10 132275162 132275530 -8041235 + L2 LINE L2 2741 3156 -116 260 167 0 19 chr10 132275647 132275701 -8041064 + Alu SINE Alu 1 53 -246 347 294 105 26 chr10 132275743 132275896 -8040869 + L1ME4a LINE L1 5258 5422 -2386 276 235 262 0 chr10 132276006 132276193 -8040572 + L1ME4a LINE L1 5859 6094 -27 960 195 19 5 chr10 132276200 132276405 -8040360 - AluJo SINE Alu -22 290 83 564 127 5 3 chr10 132276471 132276593 -8040172 + L1MB3 LINE L1 5716 5831 -337 1941 127 0 10 chr10 132276593 132276893 -8039872 + AluSx SINE Alu 1 297 -15 477 86 37 221 chr10 132276893 132276972 -8039793 - L1MC3 LINE L1 -32 7753 7661 207 100 0 0 chr10 132276972 132277002 -8039763 + (TTA)n Simple_repeat Simple_repeat 2 31 0 691 235 13 0 chr10 132277002 132277151 -8039614 - FRAM SINE Alu -15 151 1 477 86 37 221 chr10 132277151 132277189 -8039576 - L1MC3 LINE L1 -123 7662 7669 1907 113 7 10 chr10 132277189 132277491 -8039274 - AluSc SINE Alu -8 301 1 477 86 37 221 chr10 132277491 132277534 -8039231 - L1MC3 LINE L1 -115 7670 7621 250 182 0 0 chr10 132277536 132277580 -8039185 - AluJ/FLAM SINE Alu -223 79 36 2014 125 0 7 chr10 132277920 132278224 -8038541 - AluSx SINE Alu -10 302 1 1485 206 63 18 chr10 132280014 132280411 -8036354 - L1MC3 LINE L1 -19 7766 7352 254 289 0 67 chr10 132280806 132280896 -8035869 - MIR SINE MIR -68 140 57 1461 167 4 8 chr10 132281487 132281744 -8035021 - AluJb SINE Alu -56 256 1 2103 119 7 3 chr10 132284290 132284600 -8032165 + AluSq SINE Alu 1 311 -2 1962 120 0 11 chr10 132284614 132284929 -8031836 + AluSx SINE Alu 1 312 0 2367 76 0 13 chr10 132285022 132285337 -8031428 - AluY SINE Alu 0 311 1 233 218 0 55 chr10 132285347 132285402 -8031363 + MER5B DNA MER1_type 127 178 0 203 242 0 48 chr10 132285409 132285471 -8031294 - MIR3 SINE MIR -52 156 98 1710 189 13 0 chr10 132285522 132285828 -8030937 - AluJo SINE Alu -1 311 2 863 176 6 12 chr10 132286062 132286227 -8030538 + AluJb SINE Alu 133 296 -16 1673 167 10 13 chr10 132286633 132286938 -8029827 + AluJo SINE Alu 1 304 -8 406 302 120 59 chr10 132287150 132287657 -8029108 - L2 LINE L2 -1201 2113 1576 2119 123 0 3 chr10 132288269 132288579 -8028186 + AluSx SINE Alu 1 309 -3 219 139 0 0 chr10 132288579 132288615 -8028150 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 1769 134 85 0 chr10 132288985 132289268 -8027497 - AluJb SINE Alu -5 307 1 1285 56 20 67 chr10 132289279 132289474 -8027291 - AluSp SINE Alu -7 306 121 260 189 263 39 chr10 132289546 132289750 -8027015 + MIR3 SINE MIR 3 256 -6 235 331 91 25 chr10 132289764 132289885 -8026880 - L2 LINE L2 -1 3271 3143 760 233 23 0 chr10 132289917 132290093 -8026672 + Charlie4 DNA MER1_type 39 218 -1743 2155 116 0 0 chr10 132290118 132290411 -8026354 + AluSx SINE Alu 1 293 -19 2008 125 0 10 chr10 132290423 132290720 -8026045 + AluSx SINE Alu 1 294 -18 2306 97 0 0 chr10 132290723 132291022 -8025743 + AluSx SINE Alu 3 301 -11 352 167 114 0 chr10 132291028 132291142 -8025623 + Charlie4 DNA MER1_type 1767 1893 -68 2001 124 0 0 chr10 132291580 132291871 -8024894 + AluSx SINE Alu 1 291 -21 243 0 0 0 chr10 132291876 132291903 -8024862 + (CA)n Simple_repeat Simple_repeat 2 28 0 536 155 23 8 chr10 132291946 132292075 -8024690 + (CA)n Simple_repeat Simple_repeat 2 132 0 2342 86 0 0 chr10 132292078 132292380 -8024385 - AluSg SINE Alu -8 302 1 331 253 51 0 chr10 132293016 132293095 -8023670 + L2 LINE L2 3227 3309 -4 1487 138 83 24 chr10 132293199 132293488 -8023277 + AluJo SINE Alu 1 306 -6 340 204 0 0 chr10 132293489 132293543 -8023222 + AluJ/monomer SINE Alu 1 54 -246 615 115 23 0 chr10 132293543 132293630 -8023135 + AluJb SINE Alu 208 296 -16 2408 57 0 0 chr10 132293781 132294078 -8022687 - AluY SINE Alu -14 297 1 1993 124 10 0 chr10 132294584 132294874 -8021891 - AluSx SINE Alu -19 293 1 2155 120 0 0 chr10 132295316 132295625 -8021140 + AluSx SINE Alu 1 309 -3 753 231 162 22 chr10 132295783 132296197 -8020568 - LTR33 LTR ERVL -2 519 4 789 272 76 93 chr10 132297648 132297878 -8018887 + MLT1J LTR MaLR 3 235 -276 1988 106 0 4 chr10 132297878 132298152 -8018613 + AluSq SINE Alu 4 276 -37 1961 68 53 0 chr10 132298152 132298415 -8018350 + AluY SINE Alu 23 301 -10 789 272 76 93 chr10 132298415 132298668 -8018097 + MLT1J LTR MaLR 233 479 -32 1373 104 111 101 chr10 132298668 132298975 -8017790 - AluJb SINE Alu -2 310 1 2254 109 0 0 chr10 132299065 132299377 -8017388 - AluSx SINE Alu 0 312 1 1856 143 3 13 chr10 132299399 132299713 -8017052 - AluJb SINE Alu -1 311 1 809 302 33 4 chr10 132299870 132300184 -8016581 + MER45C DNA AcHobo 27 395 -558 * 866 255 134 24 chr10 132300164 132300411 -8016354 + MER45C DNA AcHobo 680 953 0 702 161 42 8 chr10 132300700 132300818 -8015947 + MER63 DNA MER1_type 6 753 -83 2215 81 0 36 chr10 132300848 132301157 -8015608 + AluSx SINE Alu 1 298 -14 336 310 54 8 chr10 132301264 132301393 -8015372 + L1M4 LINE L1 5316 5450 -712 254 223 35 0 chr10 132301440 132301507 -8015258 + L1M4 LINE L1 5530 5587 -597 213 31 62 0 chr10 132301594 132301626 -8015139 + T-rich Low_complexity Low_complexity 2 180 0 2097 97 0 62 chr10 132301626 132301928 -8014837 - AluSx SINE Alu -27 285 1 534 238 41 27 chr10 132301961 132302108 -8014657 - L1MC5 LINE L1 -103 7858 7710 1960 121 55 24 chr10 132303114 132303403 -8013362 + AluSx SINE Alu 1 298 -14 2530 68 0 0 chr10 132303403 132303699 -8013066 + AluY SINE Alu 1 296 -15 517 192 56 7 chr10 132304162 132304297 -8012468 + MIR SINE MIR 52 192 -62 306 315 30 70 chr10 132304318 132304518 -8012247 + MIR3 SINE MIR 4 195 -13 1803 171 20 0 chr10 132304629 132304921 -8011844 + AluJb SINE Alu 1 298 -14 2417 61 0 14 chr10 132305054 132305350 -8011415 - AluY SINE Alu -19 292 1 1571 96 46 69 chr10 132305351 132305611 -8011154 - AluSx SINE Alu 0 312 59 195 100 0 0 chr10 132305615 132305645 -8011120 + (TG)n Simple_repeat Simple_repeat 1 30 0 345 181 14 0 chr10 132305986 132306058 -8010707 + HsTC2 DNA Tc2 2 74 -1824 1362 234 24 57 chr10 132306117 132306450 -8010315 + MLT1C LTR MaLR 59 377 -90 1927 165 3 3 chr10 132306450 132306770 -8009995 + AluJb SINE Alu 1 312 0 1362 234 24 57 chr10 132306770 132306859 -8009906 + MLT1C LTR MaLR 377 467 0 213 65 0 0 chr10 132306890 132306921 -8009844 + (CA)n Simple_repeat Simple_repeat 2 32 0 185 223 32 85 chr10 132307065 132307159 -8009606 - MIR SINE MIR -118 144 56 2246 119 13 7 chr10 132307572 132307882 -8008883 - AluSx SINE Alu 0 312 1 2037 126 3 50 chr10 132307938 132308256 -8008509 + AluSx SINE Alu 1 303 -9 2160 108 39 0 chr10 132308256 132308542 -8008223 + AluSx SINE Alu 1 297 -15 193 182 0 0 chr10 132308606 132308639 -8008126 + L2 LINE L2 3213 3245 -27 1787 290 55 22 chr10 132308709 132309269 -8007496 + Zaphod DNA AcHobo 9 594 -3437 2272 104 24 0 chr10 132309269 132309566 -8007199 - AluSx SINE Alu -2 310 7 1787 290 55 22 chr10 132309566 132309639 -8007126 + Zaphod DNA AcHobo 594 663 -3368 1057 184 35 116 chr10 132309638 132309863 -8006902 + Zaphod DNA AcHobo 3282 3449 -582 * 1540 177 54 41 chr10 132309863 132310003 -8006762 + AluJo SINE Alu 1 138 -174 2557 61 0 0 chr10 132310003 132310298 -8006467 + AluY SINE Alu 1 295 -16 1540 177 54 41 chr10 132310298 132310451 -8006314 + AluJo SINE Alu 138 298 -14 1057 184 35 116 chr10 132310451 132310708 -8006057 + Zaphod DNA AcHobo 3449 3725 -306 247 103 13 64 chr10 132310727 132310805 -8005960 + (TTA)n Simple_repeat Simple_repeat 1 74 0 331 167 48 24 chr10 132310823 132310907 -8005858 + MER115 DNA AcHobo 608 693 0 1882 155 0 41 chr10 132310927 132311243 -8005522 - AluJb SINE Alu -9 303 1 2181 99 3 13 chr10 132311494 132311797 -8004968 + AluSc SINE Alu 1 300 -9 1790 148 0 40 chr10 132313246 132313550 -8003215 - AluJb SINE Alu -20 292 1 2195 130 0 0 chr10 132313917 132314218 -8002547 - AluSx SINE Alu -11 301 1 2224 100 4 0 chr10 132314578 132314903 -8001862 + AluSx SINE Alu 1 326 0 326 159 14 0 chr10 132315206 132315275 -8001490 + CT-rich Low_complexity Low_complexity 1 70 0 1238 216 7 48 chr10 132315275 132315585 -8001180 - AluJo SINE Alu -15 297 1 1800 166 42 0 chr10 132315602 132315891 -8000874 + AluJo SINE Alu 4 304 -8 363 212 40 30 chr10 132315892 132315991 -8000774 - L1ME4a LINE L1 -43 6078 5979 495 260 29 98 chr10 132316329 132316533 -8000232 + MIR SINE MIR 23 212 -50 2420 124 6 3 chr10 132316690 132317052 -7999713 - LTR10E LTR ERV1 0 633 271 3180 32 11 0 chr10 132317066 132317439 -7999326 - L1PA5 LINE L1 -8 6146 5770 241 289 18 6 chr10 132317448 132317572 -7999193 - L3 LINE CR1 -108 1469 1279 740 133 0 0 chr10 132317689 132317802 -7998963 - LTR10E LTR ERV1 -348 285 173 1711 52 13 4 chr10 132317802 132318035 -7998730 - LTR10E LTR ERV1 -398 235 1 1880 179 0 40 chr10 132318183 132318508 -7998257 - AluJb SINE Alu 0 312 1 285 269 260 31 chr10 132318566 132318793 -7997972 - L2 LINE L2 0 3272 2994 2122 120 27 0 chr10 132318848 132319148 -7997617 - AluSg SINE Alu -2 308 1 2326 107 0 16 chr10 132320261 132320578 -7996187 - AluSx SINE Alu 0 312 1 2218 122 0 10 chr10 132321039 132321342 -7995423 - AluSx SINE Alu -12 300 1 2065 128 23 10 chr10 132321344 132321648 -7995117 - AluSx SINE Alu -4 308 1 1883 180 0 0 chr10 132321674 132321957 -7994808 - AluJb SINE Alu -19 293 11 2394 89 3 0 chr10 132321962 132322253 -7994512 - AluSq SINE Alu -21 292 1 577 174 0 0 chr10 132322353 132322445 -7994320 + AluJb SINE Alu 208 299 -13 591 91 0 0 chr10 132322493 132322581 -7994184 - Alu SINE Alu 0 310 223 414 136 0 0 chr10 132322577 132322636 -7994129 + AluSp/q SINE Alu 236 294 -19 * 2099 59 17 38 chr10 132322677 132323006 -7993759 - AluY SINE Alu 0 323 1 2060 281 92 38 chr10 132323046 132323943 -7992822 + HAL1 LINE L1 2 849 -1658 2183 109 0 28 chr10 132323943 132324264 -7992501 + AluSx SINE Alu 1 312 0 2060 281 92 38 chr10 132324264 132324357 -7992408 + HAL1 LINE L1 849 936 -1571 2303 107 7 7 chr10 132324357 132324666 -7992099 + AluSc SINE Alu 1 309 0 2060 281 92 38 chr10 132324666 132324679 -7992086 + HAL1 LINE L1 936 1060 -1447 491 181 113 69 chr10 132324776 132324825 -7991940 + L1MC1 LINE L1 4140 4185 -1961 2252 110 0 10 chr10 132324825 132325126 -7991639 + AluSg1 SINE Alu 3 300 -9 491 181 113 69 chr10 132325126 132325280 -7991485 + L1MC1 LINE L1 4185 4352 -1794 3507 154 29 29 chr10 132325288 132325424 -7991341 + L1MC1 LINE L1 5297 5432 -901 2063 140 0 7 chr10 132325424 132325731 -7991034 + AluJb SINE Alu 1 305 -7 3507 154 29 29 chr10 132325731 132325828 -7990937 + L1MC1 LINE L1 5432 5528 -805 2247 102 0 26 chr10 132325828 132326133 -7990632 + AluY SINE Alu 1 297 -14 3507 154 29 29 chr10 132326133 132326593 -7990172 + L1MC1 LINE L1 5528 5996 -337 220 242 83 0 chr10 132326777 132326867 -7989898 + MIR SINE MIR 24 123 -85 1384 211 81 42 chr10 132326884 132327216 -7989549 - L1ME2 LINE L1 0 6164 5847 1755 161 43 0 chr10 132327216 132327496 -7989269 - AluJo SINE Alu -20 292 1 1384 211 81 42 chr10 132327496 132327531 -7989234 - L1ME2 LINE L1 -317 5847 5815 1965 88 0 8 chr10 132327531 132327782 -7988983 - AluSx SINE Alu -63 249 1 1384 211 81 42 chr10 132327782 132327919 -7988846 - L1ME2 LINE L1 -349 5815 5639 418 295 68 11 chr10 132328015 132328205 -7988560 + LTR16B LTR ERVL 113 313 -151 2086 130 3 3 chr10 132328207 132328635 -7988130 - AluSx SINE Alu 0 428 1 1418 161 0 17 chr10 132328637 132328873 -7987892 - AluSx SINE Alu -17 295 64 557 279 38 0 chr10 132328873 132329056 -7987709 + LTR16B LTR ERVL 274 463 -1 184 238 250 0 chr10 132329338 132329418 -7987347 - MIR3 SINE MIR -21 187 88 2214 147 0 0 chr10 132329626 132329938 -7986827 + AluSx SINE Alu 1 312 0 260 146 36 0 chr10 132330204 132330259 -7986506 + GA-rich Low_complexity Low_complexity 1 57 0 2307 91 3 0 chr10 132330319 132330615 -7986150 - AluSx SINE Alu -15 297 1 627 130 0 0 chr10 132331170 132331293 -7985472 + (CAT)n Simple_repeat Simple_repeat 3 125 0 1772 161 0 0 chr10 132331865 132332125 -7984640 - AluSx SINE Alu -4 308 49 587 217 96 6 chr10 132332263 132332420 -7984345 - MER5B DNA MER1_type 0 178 8 201 362 65 14 chr10 132332893 132333031 -7983734 + MIR SINE MIR 13 157 -105 189 286 0 0 chr10 132333373 132333422 -7983343 - MER5B DNA MER1_type -129 49 1 191 355 41 41 chr10 132333428 132333549 -7983216 - MIR3 SINE MIR -54 154 34 2114 147 13 0 chr10 132333722 132334028 -7982737 + AluSx SINE Alu 1 310 -2 199 291 89 0 chr10 132334883 132334962 -7981803 + MIR3 SINE MIR 109 194 -14 348 193 25 178 chr10 132334995 132335031 -7981734 + MER5B DNA MER1_type 8 48 -130 2190 112 7 0 chr10 132335031 132335326 -7981439 + AluSx SINE Alu 1 297 -15 348 193 25 178 chr10 132335326 132335491 -7981274 + MER5B DNA MER1_type 48 178 0 742 220 0 0 chr10 132335926 132336058 -7980707 - FLAM_A SINE Alu 0 133 2 823 127 0 0 chr10 132336154 132336272 -7980493 + AluJb SINE Alu 1 118 -194 1926 161 0 37 chr10 132336290 132336427 -7980338 + AluJb SINE Alu 1 142 -170 1679 167 45 0 chr10 132336427 132336729 -7980036 + AluJo SINE Alu 7 320 0 1926 161 0 37 chr10 132336729 132336913 -7979852 + AluJb SINE Alu 142 312 0 180 0 0 0 chr10 132336918 132336938 -7979827 + (GAAA)n Simple_repeat Simple_repeat 1 20 0 498 256 36 100 chr10 132337200 132337435 -7979330 + L1ME LINE L1 6 255 -6006 2372 101 0 7 chr10 132337435 132337741 -7979024 + AluSq SINE Alu 1 304 -9 498 256 36 100 chr10 132337741 132337821 -7978944 + L1ME LINE L1 255 2153 -4108 2177 91 7 21 chr10 132338206 132338492 -7978273 - AluSq SINE Alu -7 306 25 352 56 19 0 chr10 132339604 132339658 -7977107 - Alu SINE Alu -244 55 1 1829 154 46 0 chr10 132339760 132340040 -7976725 + AluSg SINE Alu 1 293 -17 1848 181 0 0 chr10 132340045 132340337 -7976428 + AluJo SINE Alu 1 292 -20 1250 175 75 72 chr10 132340581 132340676 -7976089 + Charlie1b DNA MER1_type 5 98 -2663 2239 119 3 0 chr10 132340676 132340978 -7975787 + AluSx SINE Alu 1 303 -9 1250 175 75 72 chr10 132340978 132341181 -7975584 + Charlie1b DNA MER1_type 98 307 -2454 2001 145 7 0 chr10 132341181 132341477 -7975288 + AluSx SINE Alu 1 298 -14 1250 175 75 72 chr10 132341477 132341508 -7975257 + Charlie1b DNA MER1_type 307 336 -187 30 0 0 0 chr10 132341671 132341701 -7975064 + AT_rich Low_complexity Low_complexity 1 30 0 547 178 31 31 chr10 132341711 132341840 -7974925 - Charlie1 DNA MER1_type -1 2760 2632 216 0 0 0 chr10 132341843 132341867 -7974898 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 678 162 17 17 chr10 132341875 132341992 -7974773 - FLAM_C SINE Alu -24 119 3 262 208 26 0 chr10 132341996 132342073 -7974692 - Charlie1 DNA MER1_type -119 2642 2564 2201 70 35 17 chr10 132342073 132342360 -7974405 - AluY SINE Alu -19 292 1 1829 254 32 113 chr10 132342397 132342609 -7974156 + L1ME3A LINE L1 660 888 -5508 1934 134 23 26 chr10 132342609 132342914 -7973851 + AluJo SINE Alu 1 304 -8 1829 254 32 113 chr10 132342914 132342994 -7973771 + L1ME3A LINE L1 888 973 -5423 2520 74 7 0 chr10 132342994 132343303 -7973462 + AluY SINE Alu 1 311 0 1829 254 32 113 chr10 132343303 132343846 -7972919 + L1ME3A LINE L1 973 1559 -4837 2090 107 0 20 chr10 132343846 132344144 -7972621 + AluSx SINE Alu 1 292 -20 1829 254 32 113 chr10 132344144 132344361 -7972404 + L1ME3A LINE L1 1559 1792 -4604 2244 98 48 0 chr10 132344361 132344656 -7972109 + AluSq SINE Alu 1 309 -4 1829 254 32 113 chr10 132344656 132344712 -7972053 + L1ME3A LINE L1 1792 1659 -4737 791 189 8 0 chr10 132344712 132344844 -7971921 + FLAM_A SINE Alu 1 133 0 1829 254 32 113 chr10 132344844 132344993 -7971772 + L1ME3A LINE L1 1658 1818 -4578 453 259 90 16 chr10 132344988 132345177 -7971588 + L1ME3A LINE L1 3031 3233 -2982 * 1627 173 14 0 chr10 132345180 132345464 -7971301 + AluJo SINE Alu 1 288 -24 1231 143 39 120 chr10 132345476 132345734 -7971031 + AluJo SINE Alu 1 237 -75 963 278 27 16 chr10 132345762 132346133 -7970632 + L1ME3A LINE L1 3589 3963 -2252 1547 158 24 95 chr10 132346198 132346534 -7970231 + AluJb SINE Alu 1 312 0 405 0 0 0 chr10 132346623 132346668 -7970097 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1955 129 3 27 chr10 132346672 132346967 -7969798 - AluSx SINE Alu -24 288 1 447 86 0 0 chr10 132347034 132347104 -7969661 - AluSp/q SINE Alu -3 310 241 1478 68 6 0 chr10 132347104 132347280 -7969485 + AluSq SINE Alu 111 287 -26 613 233 101 48 chr10 132347312 132347540 -7969225 + L1ME3A LINE L1 4589 4828 -1387 2359 94 7 0 chr10 132347554 132347861 -7968904 + AluSx SINE Alu 1 309 -3 1221 159 0 50 chr10 132347964 132348184 -7968581 - AluJb SINE Alu -18 294 86 247 268 110 49 chr10 132348226 132348472 -7968293 + L1ME3A LINE L1 5008 5268 -947 1596 179 47 14 chr10 132348473 132348769 -7967996 + AluJo SINE Alu 1 306 -6 198 246 0 0 chr10 132348803 132348864 -7967901 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 857 246 65 38 chr10 132348871 132349311 -7967454 + L1ME3A LINE L1 5323 5831 -408 256 184 0 0 chr10 132349320 132349369 -7967396 + L1ME3A LINE L1 5906 5954 -285 2400 91 3 0 chr10 132349397 132349694 -7967071 - AluSp SINE Alu -15 298 1 1151 138 5 16 chr10 132349785 132349954 -7966811 - AluSg/x SINE Alu -8 304 135 1778 80 4 52 chr10 132349954 132350205 -7966560 - AluSc SINE Alu -43 266 28 1644 107 4 45 chr10 132350205 132350449 -7966316 - AluSx SINE Alu -78 234 1 1151 138 5 16 chr10 132350449 132350467 -7966298 - AluSg/x SINE Alu -175 137 118 509 233 0 0 chr10 132350471 132350574 -7966191 + L1ME3A LINE L1 6133 6235 -4 246 270 27 0 chr10 132350585 132350659 -7966106 + GA-rich Low_complexity Low_complexity 3 78 0 309 282 97 16 chr10 132351341 132351465 -7965300 + MIR3 SINE MIR 15 148 -60 474 235 0 76 chr10 132351524 132351568 -7965197 - MER3 DNA MER1_type -40 122 76 1222 198 6 86 chr10 132351568 132351692 -7965073 + AluJo SINE Alu 1 133 -179 186 71 0 0 chr10 132351692 132351720 -7965045 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2122 82 37 0 chr10 132351722 132351992 -7964773 - AluSg SINE Alu -30 280 1 1222 198 6 86 chr10 132351992 132352004 -7964761 + AluJo SINE Alu 134 145 -167 2094 106 21 3 chr10 132352004 132352288 -7964477 - AluSx SINE Alu -23 289 1 1222 198 6 86 chr10 132352288 132352304 -7964461 + AluJo SINE Alu 145 289 -23 897 210 13 0 chr10 132352304 132352461 -7964304 + AluJb SINE Alu 131 289 -23 474 235 0 76 chr10 132352461 132352548 -7964217 - MER3 DNA MER1_type -86 76 48 2328 106 0 3 chr10 132352552 132352855 -7963910 - AluSx SINE Alu -10 302 1 2079 120 3 0 chr10 132352887 132353186 -7963579 + AluSq SINE Alu 1 300 -13 719 259 45 32 chr10 132353403 132353650 -7963115 - MIR SINE MIR 0 262 13 418 174 196 0 chr10 132354308 132354400 -7962365 + MER81 DNA DNA 4 113 -1 1380 106 0 0 chr10 132354646 132354826 -7961939 + AluSg/x SINE Alu 121 300 -10 1499 124 0 4 chr10 132354826 132355051 -7961714 + AluSq SINE Alu 73 296 -17 794 217 66 4 chr10 132355061 132355287 -7961478 + L1ME3 LINE L1 2198 2437 -3959 * 1295 157 0 111 chr10 132355286 132355362 -7961403 + L1M4 LINE L1 5447 5530 -648 2070 131 0 10 chr10 132355362 132355668 -7961097 - AluSx SINE Alu -9 303 1 1295 157 0 111 chr10 132355668 132355871 -7960894 + L1M4 LINE L1 5530 5695 -483 1007 140 0 19 chr10 132355871 132356028 -7960737 - AluJb SINE Alu -14 298 145 2166 114 4 0 chr10 132356044 132356347 -7960418 - AluSp SINE Alu 0 305 2 1153 179 76 131 chr10 132356347 132356873 -7959892 + L1ME3 LINE L1 2747 3243 -2972 2076 141 0 0 chr10 132356873 132357172 -7959593 + AluSx SINE Alu 1 299 -13 2137 134 0 0 chr10 132357191 132357498 -7959267 + AluSg SINE Alu 1 307 -3 1527 180 75 41 chr10 132357498 132357836 -7958929 + L1ME3 LINE L1 5082 5445 -849 2357 94 0 7 chr10 132357836 132358143 -7958622 + AluSx SINE Alu 1 305 -7 1527 180 75 41 chr10 132358143 132358254 -7958511 + L1ME3 LINE L1 5445 5551 -743 391 266 108 2 chr10 132358245 132358445 -7958320 + L1ME3 LINE L1 6001 6234 -5 * 2521 64 0 0 chr10 132358449 132358747 -7958018 + AluY SINE Alu 1 298 -13 1993 141 13 13 chr10 132358752 132359064 -7957701 + AluSx SINE Alu 1 312 0 410 242 100 115 chr10 132359849 132360118 -7956647 + L1M2 LINE L1 795 1059 -5790 2204 91 7 0 chr10 132360783 132361079 -7955686 - AluSp SINE Alu -15 298 1 2176 94 3 7 chr10 132361854 132362151 -7954614 + AluSx SINE Alu 1 296 -16 2407 62 0 43 chr10 132362177 132362501 -7954264 - AluY SINE Alu -1 310 1 2202 79 3 30 chr10 132362512 132362815 -7953950 - AluSx SINE Alu -17 295 1 275 285 190 19 chr10 132363134 132363292 -7953473 + L2 LINE L2 2871 3055 -217 29 0 0 0 chr10 132363709 132363738 -7953027 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 132364515 132364536 -7952229 + AT_rich Low_complexity Low_complexity 1 21 0 1221 193 102 23 chr10 132364566 132364831 -7951934 - AluJo SINE Alu -22 290 5 431 98 43 0 chr10 132364835 132364927 -7951838 + (TA)n Simple_repeat Simple_repeat 1 96 0 1008 134 17 73 chr10 132364927 132365083 -7951682 - AluJb SINE Alu -20 292 146 2127 104 10 10 chr10 132365083 132365381 -7951384 - AluSg SINE Alu -12 298 1 1008 134 17 73 chr10 132365381 132365403 -7951362 - AluJb SINE Alu -166 146 124 587 163 0 0 chr10 132365467 132365559 -7951206 + FLAM_A SINE Alu 2 93 -49 1513 179 85 15 chr10 132365559 132365597 -7951168 - THE1C LTR MaLR 0 428 394 2126 111 30 0 chr10 132365597 132365894 -7950871 + AluSg SINE Alu 1 306 -4 1848 114 8 8 chr10 132365903 132366158 -7950607 + AluSg SINE Alu 2 256 -54 1513 179 85 15 chr10 132366158 132366498 -7950267 - THE1C LTR MaLR -41 387 3 808 165 0 23 chr10 132366664 132366797 -7949968 - FLAM_C SINE Alu -3 130 1 21 36 0 0 chr10 132366810 132366838 -7949927 + AT_rich Low_complexity Low_complexity 1 28 0 4634 158 68 20 chr10 132366896 132367501 -7949264 - L1MB7 LINE L1 -5 6179 5605 2292 90 0 10 chr10 132367501 132367800 -7948965 - AluSx SINE Alu -16 296 1 4634 158 68 20 chr10 132367800 132368397 -7948368 - L1MB7 LINE L1 -579 5605 4902 4626 134 112 9 chr10 132368419 132369542 -7947223 - Tigger3(Golem) DNA MER2_type 0 3029 1 2451 50 7 3 chr10 132369545 132369845 -7946920 - AluY SINE Alu -10 301 1 2147 128 7 0 chr10 132370345 132370651 -7946114 + AluSx SINE Alu 1 308 -4 249 318 26 72 chr10 132370684 132370879 -7945886 - L2 LINE L2 -218 3054 2869 784 233 184 23 chr10 132371255 132371564 -7945201 - L2 LINE L2 -64 3249 2891 292 275 65 29 chr10 132371622 132371760 -7945005 - L2 LINE L2 -650 2664 2522 189 233 0 0 chr10 132371875 132371918 -7944847 + MIR SINE MIR 71 113 -149 2186 91 14 14 chr10 132371931 132372228 -7944537 - AluSg SINE Alu -13 297 1 2256 107 3 0 chr10 132372256 132372555 -7944210 + AluSg SINE Alu 1 300 -10 2134 132 10 0 chr10 132372853 132373156 -7943609 - AluSx SINE Alu -6 306 1 1460 196 35 7 chr10 132373343 132373629 -7943136 + AluJb SINE Alu 1 294 -18 1267 155 134 17 chr10 132373678 132373917 -7942848 - AluJo SINE Alu -23 289 23 2173 115 0 0 chr10 132373973 132374261 -7942504 - AluSx SINE Alu -24 288 1 3356 134 26 2 chr10 132374261 132374872 -7941893 - L1MC1 LINE L1 -4 6329 5547 2148 119 0 3 chr10 132374872 132375165 -7941600 - AluSx SINE Alu -4 308 17 3356 134 26 2 chr10 132375165 132375319 -7941446 - L1MC1 LINE L1 -786 5547 5398 1086 57 0 0 chr10 132375319 132375443 -7941322 - AluSq/x SINE Alu -179 134 11 939 224 82 8 chr10 132375459 132375714 -7941051 - L1MC1 LINE L1 -744 5402 5129 2372 90 6 6 chr10 132375716 132376027 -7940738 - AluSq SINE Alu -2 311 1 246 219 0 0 chr10 132376763 132376804 -7939961 + tRNA-Ile-ATT tRNA tRNA 11 51 -26 268 273 0 0 chr10 132377166 132377221 -7939544 - MIR3 SINE MIR -51 157 103 * 1228 262 78 13 chr10 132377188 132377574 -7939191 - L2 LINE L2 -908 2406 1996 209 245 75 0 chr10 132378592 132378645 -7938120 - L2 LINE L2 -224 3048 2992 24 85 0 0 chr10 132379459 132379518 -7937247 + AT_rich Low_complexity Low_complexity 1 59 0 891 144 0 0 chr10 132379542 132379681 -7937084 - AluSg/x SINE Alu -9 301 163 2298 97 3 0 chr10 132379774 132380072 -7936693 - AluSq SINE Alu -10 303 5 1823 126 58 4 chr10 132380923 132381200 -7935565 - AluJo SINE Alu -6 306 15 943 195 12 6 chr10 132381297 132381466 -7935299 - FRAM SINE Alu -11 165 1 1928 147 10 0 chr10 132381485 132381778 -7934987 + AluSx SINE Alu 1 296 -16 827 156 7 0 chr10 132381783 132381918 -7934847 - FLAM_C SINE Alu -1 142 7 22 56 0 0 chr10 132382515 132382551 -7934214 + AT_rich Low_complexity Low_complexity 1 36 0 2066 104 6 55 chr10 132383284 132383610 -7933155 + AluSg SINE Alu 1 310 0 24 0 0 0 chr10 132383786 132383810 -7932955 + AT_rich Low_complexity Low_complexity 1 24 0 2071 112 4 0 chr10 132383964 132384240 -7932525 - AluSg1 SINE Alu -32 277 1 32 26 0 0 chr10 132384257 132384296 -7932469 + AT_rich Low_complexity Low_complexity 1 39 0 610 186 10 0 chr10 132386001 132386098 -7930667 + FAM SINE Alu 60 157 -28 213 194 0 0 chr10 132386114 132386150 -7930615 + (TG)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr10 132387048 132387071 -7929694 + AT_rich Low_complexity Low_complexity 1 23 0 1501 187 3 31 chr10 132387095 132387384 -7929381 - AluJo SINE Alu -31 281 1 1482 166 18 18 chr10 132387671 132387949 -7928816 - L1MB5 LINE L1 -11 6163 5886 225 0 0 0 chr10 132388000 132388025 -7928740 + (T)n Simple_repeat Simple_repeat 1 25 0 1737 152 38 7 chr10 132388390 132388679 -7928086 - AluJb SINE Alu -14 298 1 2323 103 3 3 chr10 132388726 132389036 -7927729 + AluSp SINE Alu 1 310 -3 1140 250 198 46 chr10 132390132 132390615 -7926150 + L2 LINE L2 2265 2673 -640 2569 135 47 35 chr10 132390615 132391038 -7925727 + Tigger2a DNA MER2_type 4 431 -3 1140 250 198 46 chr10 132391038 132391462 -7925303 + L2 LINE L2 2673 3313 0 227 102 0 82 chr10 132392014 132392063 -7924702 - LTR66 LTR ERVL -172 438 394 243 0 0 0 chr10 132392087 132392114 -7924651 + (CA)n Simple_repeat Simple_repeat 2 28 0 1472 163 107 4 chr10 132392114 132392384 -7924381 - AluJo SINE Alu -14 298 1 25 51 0 0 chr10 132392684 132392723 -7924042 + AT_rich Low_complexity Low_complexity 1 39 0 1745 159 3 10 chr10 132392724 132393014 -7923751 - AluJb SINE Alu -24 288 1 1426 211 32 18 chr10 132393287 132393567 -7923198 + AluJo SINE Alu 3 286 -16 2345 103 3 0 chr10 132394265 132394576 -7922189 + AluSq SINE Alu 2 313 0 1734 225 117 28 chr10 132394713 132395176 -7921589 + MLT1D LTR MaLR 2 505 0 2239 105 3 3 chr10 132395204 132395499 -7921266 - AluSq SINE Alu -18 295 1 2052 109 13 33 chr10 132395513 132395815 -7920950 - AluSg SINE Alu -14 296 1 1729 154 0 60 chr10 132396543 132396875 -7919890 - AluJb SINE Alu 0 312 1 2200 130 0 0 chr10 132397036 132397337 -7919428 - AluSx SINE Alu -11 301 1 2401 61 14 0 chr10 132397437 132397731 -7919034 + AluY SINE Alu 1 298 -13 1101 166 0 0 chr10 132397813 132397988 -7918777 - AluSg/x SINE Alu 0 312 138 2095 125 0 10 chr10 132399048 132399361 -7917404 - AluSx SINE Alu -2 310 1 1294 229 137 44 chr10 132399368 132399915 -7916850 - L1MC4 LINE L1 -3 8039 7442 2136 153 56 22 chr10 132399984 132400312 -7916453 - L1MB3 LINE L1 -9 6174 5828 2027 134 0 10 chr10 132400312 132400619 -7916146 - AluSx SINE Alu -8 304 1 2136 153 56 22 chr10 132400619 132400703 -7916062 - L1MB3 LINE L1 -355 5828 5748 1026 195 19 5 chr10 132400807 132401012 -7915753 + AluJo SINE Alu 83 290 -22 317 235 262 0 chr10 132401019 132401206 -7915559 - L1ME4a LINE L1 -27 6094 5859 246 167 0 19 chr10 132401511 132401565 -7915200 - Alu SINE Alu -246 53 1 251 332 140 46 chr10 132401682 132402050 -7914715 - L2 LINE L2 -116 3156 2824 1615 177 27 20 chr10 132402050 132402349 -7914416 - AluJb SINE Alu -11 301 1 251 332 140 46 chr10 132402349 132402633 -7914132 - L2 LINE L2 -448 2824 2430 1747 153 46 25 chr10 132403028 132403310 -7913455 - AluJo SINE Alu -24 288 1 2448 76 0 16 chr10 132403578 132403895 -7912870 - AluSq SINE Alu -1 312 1 2513 98 0 0 chr10 132405573 132405879 -7910886 + AluSx SINE Alu 1 306 -6 285 51 0 0 chr10 132406127 132406166 -7910599 + (T)n Simple_repeat Simple_repeat 1 39 0 22 56 0 0 chr10 132406478 132406514 -7910251 + AT_rich Low_complexity Low_complexity 1 36 0 229 79 0 26 chr10 132406749 132406787 -7909978 - L1MB8 LINE L1 -10 6168 6132 207 233 17 17 chr10 132407139 132407199 -7909566 + (CATA)n Simple_repeat Simple_repeat 4 63 0 22 35 0 0 chr10 132408290 132408319 -7908446 + AT_rich Low_complexity Low_complexity 1 29 0 322 339 108 0 chr10 132409626 132409756 -7907009 - L2 LINE L2 -2 3311 3168 2143 141 7 0 chr10 132410479 132410785 -7905980 - AluSx SINE Alu -4 308 1 194 359 114 0 chr10 132411224 132411355 -7905410 - L2 LINE L2 -2597 717 572 1240 219 123 62 chr10 132411428 132411849 -7904916 - MLT1F1 LTR MaLR -3 564 118 769 209 17 17 chr10 132412111 132412288 -7904477 - Charlie4 DNA MER1_type 0 1961 1785 1753 142 40 26 chr10 132412843 132413145 -7903620 - AluJb SINE Alu -1 311 6 1784 124 76 24 chr10 132413422 132413713 -7903052 - AluSx SINE Alu -6 306 1 330 276 29 0 chr10 132414272 132414377 -7902388 - L1ME LINE L1 -422 5699 5592 1266 165 8 25 chr10 132415351 132415587 -7901178 - AluJo SINE Alu 0 312 81 1691 194 3 16 chr10 132415736 132416045 -7900720 - AluJb SINE Alu -7 305 1 22 0 0 0 chr10 132416401 132416423 -7900342 + AT_rich Low_complexity Low_complexity 1 22 0 222 37 0 0 chr10 132417369 132417396 -7899369 + (ATTG)n Simple_repeat Simple_repeat 3 29 0 1370 220 3 3 chr10 132417405 132417687 -7899078 - AluJb SINE Alu -30 282 1 400 304 110 31 chr10 132417774 132418100 -7898665 - L1MC4 LINE L1 0 8042 7691 1890 139 0 11 chr10 132418319 132418586 -7898179 + AluSx SINE Alu 12 275 -37 2443 90 3 3 chr10 132419149 132419460 -7897305 - AluSx SINE Alu -1 311 1 1626 187 0 27 chr10 132419564 132419864 -7896901 - AluJb SINE Alu -20 292 1 204 40 0 0 chr10 132419864 132419889 -7896876 + (T)n Simple_repeat Simple_repeat 1 25 0 1733 147 4 4 chr10 132420067 132420325 -7896440 + AluJb SINE Alu 52 309 -3 1396 141 71 71 chr10 132421211 132421480 -7895285 - AluJo SINE Alu -9 303 35 823 169 0 0 chr10 132421505 132421635 -7895130 + FLAM_C SINE Alu 1 130 -3 588 211 8 0 chr10 132421635 132421758 -7895007 + L1M4 LINE L1 5433 5556 -618 442 197 0 0 chr10 132421763 132421834 -7894931 - FLAM_A SINE Alu -57 85 15 3328 208 30 26 chr10 132421836 132422763 -7894002 - L1ME LINE L1 -721 5441 4513 242 182 296 0 chr10 132422762 132422850 -7893915 - L1ME LINE L1 -2299 3847 3734 * 620 207 41 55 chr10 132423346 132423491 -7893274 - AluSq/x SINE Alu -163 149 7 233 207 104 137 chr10 132426571 132426841 -7889924 - L2 LINE L2 -406 2908 2648 330 132 0 0 chr10 132428859 132428912 -7887853 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr10 132429552 132429573 -7887192 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 132429946 132429974 -7886791 + AT_rich Low_complexity Low_complexity 1 28 0 1174 221 20 4 chr10 132432373 132432626 -7884139 - AluJb SINE Alu -55 257 1 2440 77 0 13 chr10 132432631 132432931 -7883834 - AluSc SINE Alu -13 296 1 972 246 74 31 chr10 132433225 132433578 -7883187 + MLT1A2 LTR MaLR 4 371 -3 767 186 31 67 chr10 132434190 132434383 -7882382 + MER20 DNA MER1_type 34 219 0 817 159 8 0 chr10 132434850 132434982 -7881783 - AluSg/x SINE Alu -38 272 140 198 71 0 0 chr10 132438629 132438657 -7878108 + (T)n Simple_repeat Simple_repeat 1 28 0 345 245 19 85 chr10 132439797 132439903 -7876862 - MIR SINE MIR -69 139 41 251 307 8 31 chr10 132450301 132450428 -7866337 + LTR67 LTR ERVL 414 537 -20 2198 122 3 3 chr10 132450539 132450835 -7865930 - AluSq SINE Alu -17 296 1 4806 58 3 0 chr10 132451257 132451846 -7864919 + LTR10C LTR ERV1 1 591 0 207 0 0 0 chr10 132452808 132452831 -7863934 + (A)n Simple_repeat Simple_repeat 1 23 0 852 119 0 0 chr10 132455227 132455353 -7861412 - AluSx SINE Alu -11 301 176 897 70 0 0 chr10 132455353 132455468 -7861297 - AluSx SINE Alu -197 115 1 408 258 126 7 chr10 132456220 132456371 -7860394 - MIR SINE MIR -78 184 16 1190 166 52 0 chr10 132456852 132457063 -7859702 + AluJo SINE Alu 85 306 -6 1723 125 133 0 chr10 132460831 132461095 -7855670 + AluSx SINE Alu 1 299 -3 339 44 0 0 chr10 132461132 132461177 -7855588 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 1000 213 93 4 chr10 132462216 132462484 -7854281 + L1M4 LINE L1 4957 5248 -898 230 240 81 0 chr10 132463877 132463959 -7852806 - MIR SINE MIR -49 159 68 184 279 15 15 chr10 132464968 132465036 -7851729 + L2 LINE L2 3187 3254 -18 261 262 10 29 chr10 132465036 132465139 -7851626 + GA-rich Low_complexity Low_complexity 4 104 0 180 0 0 0 chr10 132467114 132467134 -7849631 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr10 132469244 132469272 -7847493 + GC_rich Low_complexity Low_complexity 1 28 0 2037 90 6 81 chr10 132471813 132472148 -7844617 - AluSq SINE Alu -3 310 1 229 26 53 0 chr10 132472725 132472763 -7844002 + (CA)n Simple_repeat Simple_repeat 2 41 0 2248 94 0 0 chr10 132473795 132474102 -7842663 + AluSx SINE Alu 1 307 -5 324 0 0 0 chr10 132479255 132479291 -7837474 + (TG)n Simple_repeat Simple_repeat 2 37 0 481 286 13 13 chr10 132480063 132480217 -7836548 + L1MC4 LINE L1 7505 7658 -384 2168 120 3 0 chr10 132482737 132483045 -7833720 + AluSx SINE Alu 1 309 -3 321 26 0 0 chr10 132483162 132483200 -7833565 + (CA)n Simple_repeat Simple_repeat 1 38 0 1861 135 10 7 chr10 132483660 132483956 -7832809 - AluJb SINE Alu -15 297 1 183 42 0 0 chr10 132484541 132484565 -7832200 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 2236 84 7 7 chr10 132486001 132486311 -7830454 - AluY SINE Alu -1 310 1 645 207 92 37 chr10 132487214 132487378 -7829387 + FAM SINE Alu 1 173 -2 869 177 134 94 chr10 132487582 132487932 -7828833 + MLT1A1 LTR MaLR 2 365 0 1594 136 92 0 chr10 132488110 132488382 -7828383 - AluSx SINE Alu -15 297 1 2155 112 0 3 chr10 132488847 132489150 -7827615 + AluSx SINE Alu 1 302 -10 316 66 16 49 chr10 132491633 132491694 -7825071 + (CA)n Simple_repeat Simple_repeat 1 59 0 2166 110 0 25 chr10 132493925 132494244 -7822521 + AluSx SINE Alu 1 311 -1 1451 207 80 45 chr10 132494280 132494657 -7822108 + MLT1B LTR MaLR 1 390 0 914 234 70 40 chr10 132496755 132497225 -7819540 + MLT1E LTR MaLR 21 593 0 1957 134 0 0 chr10 132498452 132498795 -7817970 + AluSg SINE Alu 1 310 0 1160 86 7 0 chr10 132501075 132501227 -7815538 + AluSx SINE Alu 1 153 -159 1612 138 4 0 chr10 132501228 132501468 -7815297 + AluSx SINE Alu 52 292 -20 1803 117 0 4 chr10 132501862 132502119 -7814646 + AluSx SINE Alu 1 256 -56 354 80 0 0 chr10 132503029 132503079 -7813686 + (TG)n Simple_repeat Simple_repeat 2 51 0 362 241 120 23 chr10 132503189 132503322 -7813443 + L3 LINE CR1 1246 1391 -186 403 306 117 6 chr10 132504393 132504573 -7812192 - MIR SINE MIR -24 238 39 2057 131 23 7 chr10 132505148 132505453 -7811312 + AluSx SINE Alu 1 310 -2 1627 163 4 8 chr10 132508380 132508637 -7808128 + AluJb SINE Alu 1 256 -56 241 292 0 67 chr10 132509227 132509316 -7807449 + MIR SINE MIR 57 139 -123 1434 204 63 18 chr10 132509711 132510108 -7806657 + L1MC3 LINE L1 7352 7766 -19 2147 128 0 7 chr10 132511897 132512201 -7804564 + AluSx SINE Alu 1 302 -10 240 182 0 0 chr10 132512542 132512586 -7804179 + Alu SINE Alu 36 79 -223 426 86 37 221 chr10 132512588 132512631 -7804134 + L1MC3 LINE L1 7621 7670 -115 2107 108 0 13 chr10 132512631 132512936 -7803829 + AluSc SINE Alu 1 301 -8 426 86 37 221 chr10 132512936 132512974 -7803791 + L1MC3 LINE L1 7670 7662 -123 663 235 13 0 chr10 132512974 132513153 -7803612 + FRAM SINE Alu 1 45 0 426 86 37 221 chr10 132513153 132513232 -7803533 + L1MC3 LINE L1 7661 7753 -32 1484 140 14 0 chr10 132513232 132513453 -7803312 - AluSg/x SINE Alu -15 295 72 239 219 0 0 chr10 132513453 132513494 -7803271 - AluJ/monomer SINE Alu -262 41 1 435 81 47 6 chr10 132514639 132514850 -7801915 + AluSg SINE Alu 45 296 -14 2100 138 6 22 chr10 132514896 132515214 -7801551 + AluSq SINE Alu 1 313 0 2023 112 14 27 chr10 132515805 132516099 -7800666 - AluSx SINE Alu -22 290 1 660 236 28 0 chr10 132516572 132516716 -7800049 - MER20 DNA MER1_type -5 214 67 2176 96 34 0 chr10 132516909 132517202 -7799563 - AluSq SINE Alu -9 304 2 1258 258 123 34 chr10 132517579 132517807 -7798958 + L1ME LINE L1 5032 5238 -932 1437 194 121 8 chr10 132517807 132518163 -7798602 + MSTD LTR MaLR 1 396 0 1258 258 123 34 chr10 132518163 132518649 -7798116 + L1ME LINE L1 5238 5815 -355 2674 46 0 0 chr10 132520557 132520859 -7795906 + AluY SINE Alu 1 302 -9 2132 129 0 31 chr10 132521413 132521730 -7795035 + AluSx SINE Alu 1 307 -5 2105 213 93 42 chr10 132523523 132524235 -7792530 + L1MC4 LINE L1 6126 6242 0 2154 131 7 3 chr10 132525140 132525446 -7791319 - AluSx SINE Alu -5 307 1 1088 152 77 146 chr10 132526190 132526336 -7790429 - AluJo SINE Alu -1 301 187 2207 109 7 3 chr10 132526336 132526638 -7790127 - AluSx SINE Alu -9 303 1 1088 152 77 146 chr10 132526638 132526814 -7789951 - AluJo SINE Alu -115 187 1 828 148 7 13 chr10 132528649 132528798 -7787967 + MLT1A1 LTR MaLR 3 150 -215 1314 119 0 55 chr10 132528811 132529012 -7787753 + AluSq SINE Alu 6 195 -118 824 235 0 0 chr10 132529025 132529191 -7787574 + FRAM SINE Alu 1 166 0 940 185 101 0 chr10 132529196 132529385 -7787380 + MLT1A1 LTR MaLR 158 365 0 2304 106 10 0 chr10 132529624 132529927 -7786838 - AluSx SINE Alu -6 306 1 227 255 0 0 chr10 132532286 132532333 -7784432 + L2 LINE L2 3214 3260 -12 292 196 0 0 chr10 132532728 132532774 -7783991 + Alu SINE Alu 1 46 -255 540 102 23 0 chr10 132532776 132532864 -7783901 + AluJ/FRAM SINE Alu 216 305 -7 22 0 0 0 chr10 132533012 132533034 -7783731 + AT_rich Low_complexity Low_complexity 1 22 0 1852 154 35 3 chr10 132533048 132533358 -7783407 + AluJb SINE Alu 7 325 0 636 266 57 0 chr10 132533406 132533598 -7783167 - MIR SINE MIR -21 241 39 1880 152 17 7 chr10 132534052 132534348 -7782417 + AluJb SINE Alu 1 299 -13 1957 118 33 33 chr10 132534736 132535041 -7781724 - AluSx SINE Alu -6 306 2 833 192 28 16 chr10 132537155 132537337 -7779428 + MER20 DNA MER1_type 34 217 -2 2015 103 29 58 chr10 132540382 132540694 -7776071 + AluSx SINE Alu 1 303 -9 1217 58 0 6 chr10 132541188 132541360 -7775405 + (GA)n Simple_repeat Simple_repeat 2 172 0 33 25 0 0 chr10 132543087 132543127 -7773638 + AT_rich Low_complexity Low_complexity 1 40 0 511 248 8 15 chr10 132544421 132544554 -7772211 - L1PB4 LINE L1 -13 6143 6012 413 248 68 56 chr10 132544594 132544755 -7772010 - MIR SINE MIR -14 248 86 195 188 21 21 chr10 132545836 132545884 -7770881 - L2 LINE L2 0 3313 3266 449 241 9 0 chr10 132547556 132547668 -7769097 - AluJb SINE Alu -6 306 194 1228 176 20 36 chr10 132547719 132547969 -7768796 - AluJo SINE Alu -23 289 44 2406 104 0 0 chr10 132554667 132554975 -7761790 - AluSx SINE Alu -4 308 1 2298 106 3 0 chr10 132554986 132555288 -7761477 - AluSg SINE Alu -7 303 1 224 293 83 30 chr10 132558044 132558177 -7758588 + MIR SINE MIR 122 261 -1 335 229 52 21 chr10 132558579 132558675 -7758090 - L2 LINE L2 -4 3268 3170 456 281 93 65 chr10 132562063 132562373 -7754392 + L1ME4a LINE L1 5801 6119 -2 2129 128 0 0 chr10 132562946 132563236 -7753529 - AluSx SINE Alu -12 300 11 810 184 82 0 chr10 132563247 132563394 -7753371 - AluJb SINE Alu -22 290 132 1120 189 35 161 chr10 132565449 132566077 -7750688 + L1MD2 LINE L1 5810 6358 -1 220 245 3 0 chr10 132568741 132568796 -7747969 + MIR SINE MIR 68 123 -85 225 0 0 0 chr10 132569488 132569513 -7747252 + (TC)n Simple_repeat Simple_repeat 2 26 0 1351 223 68 25 chr10 132571265 132571660 -7745105 + L1ME1 LINE L1 5524 5935 -229 583 202 52 105 chr10 132571687 132571935 -7744830 + L1ME2 LINE L1 5900 6134 -30 2227 123 0 10 chr10 132572608 132572917 -7743848 - AluSq SINE Alu -7 306 1 324 247 52 84 chr10 132573691 132573845 -7742920 - LTR16B LTR ERVL -315 149 1 325 320 39 7 chr10 132574166 132574319 -7742446 - MLT1J1 LTR MaLR 0 446 289 287 269 94 47 chr10 132574320 132574469 -7742296 - MLT1J2 LTR MaLR -182 268 113 494 233 7 40 chr10 132574801 132574951 -7741814 - MER104 DNA Tc2 -6 174 30 214 265 196 0 chr10 132576774 132576876 -7739889 - MIR SINE MIR -95 167 46 482 281 61 6 chr10 132578578 132578742 -7738023 + MER5B DNA MER1_type 1 173 -5 193 308 0 0 chr10 132581491 132581543 -7735222 + MIR SINE MIR 70 121 -87 2057 111 16 26 chr10 132581660 132581967 -7734798 + AluSx SINE Alu 1 304 -8 2092 149 7 0 chr10 132583111 132583419 -7733346 + AluSx SINE Alu 1 310 -2 2146 124 6 16 chr10 132583428 132583743 -7733022 + AluSx SINE Alu 1 312 0 324 300 112 18 chr10 132585023 132585193 -7731572 + L1ME1 LINE L1 5965 6150 -16 2066 105 39 3 chr10 132585776 132586062 -7730703 + AluSx SINE Alu 1 296 -16 203 300 186 36 chr10 132586894 132587034 -7729731 + MIR SINE MIR 52 212 -50 198 71 0 0 chr10 132588061 132588089 -7728676 + (CAGGG)n Simple_repeat Simple_repeat 3 30 0 201 121 0 0 chr10 132588247 132588280 -7728485 + (CCA)n Simple_repeat Simple_repeat 2 34 0 1406 125 0 0 chr10 132588491 132588683 -7728082 - AluSq SINE Alu -10 303 112 932 123 0 0 chr10 132588721 132588843 -7727922 - AluSq SINE Alu -191 122 1 2227 120 0 7 chr10 132588853 132589153 -7727612 - AluSx SINE Alu -14 298 1 227 216 81 0 chr10 132589387 132589461 -7727304 + L2 LINE L2 3230 3309 -4 1775 169 3 10 chr10 132590188 132590483 -7726282 + AluJb SINE Alu 4 296 -16 289 288 127 8 chr10 132590484 132590602 -7726163 - MIR SINE MIR -14 248 117 833 192 28 16 chr10 132594485 132594667 -7722098 - MER20 DNA MER1_type -2 217 34 1813 141 33 33 chr10 132596782 132597087 -7719678 + AluSx SINE Alu 2 306 -6 1915 153 17 3 chr10 132597475 132597770 -7718995 - AluJb SINE Alu -13 299 1 636 266 57 0 chr10 132598224 132598416 -7718349 + MIR SINE MIR 39 241 -21 1851 154 35 3 chr10 132598464 132598774 -7717991 - AluJb SINE Alu 0 325 7 22 0 0 0 chr10 132598788 132598810 -7717955 + AT_rich Low_complexity Low_complexity 1 22 0 510 101 22 11 chr10 132598958 132599047 -7717718 - AluJ/FRAM SINE Alu -7 305 216 292 196 0 0 chr10 132599049 132599095 -7717670 - Alu SINE Alu -257 46 1 227 255 0 0 chr10 132599490 132599537 -7717228 - L2 LINE L2 -12 3260 3214 2304 106 10 0 chr10 132601896 132602199 -7714566 + AluSx SINE Alu 1 306 -6 940 185 101 0 chr10 132602438 132602627 -7714138 - MLT1A1 LTR MaLR 0 365 158 796 241 0 0 chr10 132602631 132602797 -7713968 - FRAM SINE Alu 0 166 1 1314 119 0 55 chr10 132602810 132603011 -7713754 - AluSq SINE Alu -118 195 6 828 148 7 13 chr10 132603024 132603173 -7713592 - MLT1A1 LTR MaLR -215 150 3 1088 152 77 146 chr10 132605005 132605181 -7711584 + AluJo SINE Alu 1 147 -155 2207 109 7 3 chr10 132605181 132605483 -7711282 + AluSx SINE Alu 1 303 -9 1088 152 77 146 chr10 132605483 132605629 -7711136 + AluJo SINE Alu 147 301 -1 2165 128 7 3 chr10 132606373 132606678 -7710087 + AluSx SINE Alu 1 306 -6 2065 213 93 42 chr10 132607583 132608295 -7708470 - L1MD1 LINE L1 0 8042 6126 2150 127 0 29 chr10 132610088 132610403 -7706362 - AluSx SINE Alu -6 306 1 2282 92 0 10 chr10 132610955 132611258 -7705507 - AluY SINE Alu -11 300 1 229 26 53 0 chr10 132612290 132612328 -7704437 + (TG)n Simple_repeat Simple_repeat 2 41 0 2172 92 3 81 chr10 132612905 132613240 -7703525 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr10 132615781 132615809 -7700956 + GC_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 132617919 132617939 -7698826 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 261 262 10 29 chr10 132619914 132620017 -7696748 + CT-rich Low_complexity Low_complexity 4 104 0 187 182 36 36 chr10 132620030 132620085 -7696680 - L2 LINE L2 -31 3241 3187 240 232 110 0 chr10 132621093 132621175 -7695590 + MIR SINE MIR 68 159 -49 973 220 93 4 chr10 132622568 132622836 -7693929 - L1M4 LINE L1 -898 5248 4957 339 44 0 0 chr10 132623875 132623920 -7692845 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 1734 125 133 0 chr10 132623957 132624221 -7692544 - AluSx SINE Alu -3 299 1 940 258 52 8 chr10 132629017 132629269 -7687496 - L2 LINE L2 -599 2715 2453 816 217 144 83 chr10 132629271 132629668 -7687097 - MLT1F1 LTR MaLR 0 567 147 739 172 0 0 chr10 132629883 132629999 -7686766 + AluJb SINE Alu 176 291 -21 209 213 0 0 chr10 132630684 132630731 -7686034 + T-rich Low_complexity Low_complexity 1 47 0 827 236 146 36 chr10 132631500 132631856 -7684909 - MLT1I LTR MaLR 0 409 15 2293 119 37 8 chr10 132633030 132633384 -7683381 + THE1B LTR MaLR 1 364 0 659 247 113 37 chr10 132634909 132635209 -7681556 - L1ME3A LINE L1 -49 6121 5799 563 306 60 32 chr10 132638973 132639287 -7677478 - MLT1I LTR MaLR -16 393 71 261 248 101 54 chr10 132639714 132639863 -7676902 + MLT1J2 LTR MaLR 113 268 -182 303 320 39 7 chr10 132639864 132640017 -7676748 + MLT1J1 LTR MaLR 289 446 0 1270 85 0 0 chr10 132641250 132641403 -7675362 + AluSx SINE Alu 1 153 -159 1077 161 43 0 chr10 132641404 132641615 -7675150 + AluSx SINE Alu 52 271 -41 208 338 81 45 chr10 132642259 132642481 -7674284 - L2 LINE L2 -2430 884 655 1366 144 162 48 chr10 132642498 132642769 -7673996 + AluJo SINE Alu 1 302 0 186 274 59 0 chr10 132642970 132643021 -7673744 + MIR3 SINE MIR 110 163 -45 2114 147 0 0 chr10 132643025 132643331 -7673434 + AluSx SINE Alu 1 306 -6 180 111 0 0 chr10 132643957 132643984 -7672781 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 271 56 0 0 chr10 132645413 132645449 -7671316 + L2 LINE L2 3274 3309 -4 2098 107 7 10 chr10 132646384 132646675 -7670090 - AluSg SINE Alu -20 290 1 861 285 115 23 chr10 132646715 132646779 -7669986 - MLT1K LTR MaLR -26 562 505 234 0 0 0 chr10 132646779 132646805 -7669960 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 861 285 115 23 chr10 132646805 132647252 -7669513 - MLT1K LTR MaLR -83 505 4 255 170 35 35 chr10 132647282 132647365 -7669400 + AluS SINE Alu 1 65 -243 1166 288 63 49 chr10 132648821 132649391 -7667374 - MLT1K LTR MaLR 0 588 11 440 269 17 0 chr10 132650094 132650213 -7666552 + L1ME LINE L1 5604 5724 -397 284 157 0 0 chr10 132650752 132650848 -7665917 + AluJ/FRAM SINE Alu 230 325 0 2556 66 3 0 chr10 132650974 132651278 -7665487 - AluSq SINE Alu -8 305 1 497 225 86 26 chr10 132653345 132653473 -7663292 - L1ME LINE L1 -628 5538 5419 2239 109 13 10 chr10 132653473 132653776 -7662989 - AluSx SINE Alu -8 304 1 497 225 86 26 chr10 132653776 132653955 -7662810 - L1ME LINE L1 -747 5419 5211 1207 178 8 45 chr10 132653980 132654222 -7662543 - AluJo SINE Alu -9 303 71 451 251 114 47 chr10 132654269 132654526 -7662239 + L1MC4a LINE L1 5647 5792 -378 2056 163 0 3 chr10 132654600 132654913 -7661852 - AluJb SINE Alu 0 312 1 356 238 37 65 chr10 132655313 132655437 -7661328 + MIR SINE MIR 32 151 -62 360 208 44 71 chr10 132656463 132656584 -7660181 - MIR3 SINE MIR -48 160 42 392 258 53 30 chr10 132656710 132656842 -7659923 + MLT1L LTR MaLR 258 392 -223 1090 225 114 59 chr10 132656864 132657357 -7659408 - LTR33A LTR ERVL -3 520 1 907 215 0 0 chr10 132657502 132657660 -7659105 + FRAM SINE Alu 1 158 -18 1504 82 0 44 chr10 132658271 132658501 -7658264 + AluSg/x SINE Alu 84 304 0 232 108 27 0 chr10 132658566 132658603 -7658162 - MLT1K LTR MaLR -19 569 532 1778 154 91 0 chr10 132659234 132659520 -7657245 + AluJo SINE Alu 1 312 0 1775 186 6 22 chr10 132659525 132659664 -7657101 + AluJo SINE Alu 1 141 -171 2221 87 38 0 chr10 132659664 132659951 -7656814 + AluSp SINE Alu 1 298 -15 1775 186 6 22 chr10 132659951 132660128 -7656637 + AluJo SINE Alu 141 312 0 622 280 118 5 chr10 132660832 132661043 -7655722 - MIR SINE MIR 0 262 28 516 292 64 6 chr10 132661298 132661716 -7655049 + LTR33 LTR ERVL 15 513 -8 487 258 141 0 chr10 132661742 132661870 -7654895 + MIR SINE MIR 105 250 -12 1096 109 13 0 chr10 132661888 132662044 -7654721 - L1PA10 LINE L1 -6 6162 6005 185 300 20 0 chr10 132662096 132662146 -7654619 - MER5A DNA MER1_type 0 189 139 221 344 148 0 chr10 132662561 132662750 -7654015 + L2 LINE L2 2839 3055 -217 2266 121 16 0 chr10 132662820 132663126 -7653639 - AluSx SINE Alu 0 312 2 746 276 103 43 chr10 132663181 132663578 -7653187 + L1ME4a LINE L1 5513 5956 -165 2135 128 3 0 chr10 132663578 132663867 -7652898 - AluSq SINE Alu -21 292 3 746 276 103 43 chr10 132663867 132664044 -7652721 + L1ME4a LINE L1 5956 6121 0 333 286 61 99 chr10 132665250 132665463 -7651302 - L2 LINE L2 -18 3254 3050 228 35 0 0 chr10 132666930 132666959 -7649806 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 322 170 234 32 chr10 132667023 132667117 -7649648 - MER81 DNA DNA -1 113 1 829 172 21 45 chr10 132667379 132667645 -7649120 - L1MB2 LINE L1 -157 6014 5710 245 345 26 9 chr10 132667646 132667762 -7649003 - MIR SINE MIR -99 163 46 2101 136 152 8 chr10 132667861 132668235 -7648530 - MSTA LTR MaLR 0 428 1 534 260 54 39 chr10 132668235 132668439 -7648326 - MLT1J2 LTR MaLR -3 447 241 1568 214 41 71 chr10 132670698 132671275 -7645490 - MLT1F1 LTR MaLR 0 593 1 2063 121 0 3 chr10 132671314 132671596 -7645169 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr10 132671598 132671622 -7645143 + (T)n Simple_repeat Simple_repeat 1 24 0 843 179 130 6 chr10 132671649 132671845 -7644920 + FRAM SINE Alu 1 209 0 230 291 188 0 chr10 132672476 132672593 -7644172 - MIR SINE MIR -6 256 118 264 290 79 45 chr10 132672875 132673021 -7643744 + MIR3 SINE MIR 3 154 -69 287 314 43 0 chr10 132673047 132673187 -7643578 + MER117 DNA MER1_type 16 161 -36 187 292 56 0 chr10 132673228 132673300 -7643465 + MIR SINE MIR 168 243 -19 2241 123 0 0 chr10 132674374 132674674 -7642091 - AluSx SINE Alu -12 300 1 196 327 36 42 chr10 132674953 132675121 -7641644 + L2 LINE L2 1724 1890 -1424 1381 204 86 6 chr10 132675950 132676274 -7640491 + MER58D DNA MER1_type 37 386 0 210 279 164 33 chr10 132676305 132676427 -7640338 + L2 LINE L2 2720 2857 -457 250 304 125 0 chr10 132676471 132676583 -7640182 + L2 LINE L2 3147 3272 0 278 367 55 0 chr10 132676930 132677058 -7639707 - MIR3 SINE MIR -70 138 4 1918 159 13 3 chr10 132677176 132677478 -7639287 + AluJb SINE Alu 1 305 -7 2228 79 41 3 chr10 132677480 132677856 -7638909 + AluYa5 SINE Alu 10 396 0 1258 217 13 26 chr10 132678768 132679077 -7637688 - MLT1A1 LTR MaLR -7 358 54 2678 49 0 0 chr10 132680292 132680596 -7636169 + AluY SINE Alu 1 304 -7 196 328 0 30 chr10 132680753 132680820 -7635945 - L2 LINE L2 -4 3268 3204 276 189 135 167 chr10 132680876 132681017 -7635748 + MER112 DNA MER1_type 2 135 -125 1962 150 13 19 chr10 132681017 132681324 -7635441 - AluSx SINE Alu -7 305 1 276 189 135 167 chr10 132681324 132681404 -7635361 + MER112 DNA MER1_type 135 216 -44 406 298 0 0 chr10 132681407 132681528 -7635237 - AluY SINE Alu -187 124 4 1472 134 17 112 chr10 132681863 132682220 -7634545 + L1MA10 LINE L1 6012 6334 0 287 280 101 37 chr10 132682216 132682278 -7634487 + L1ME4a LINE L1 5831 5888 -233 * 2350 89 7 0 chr10 132682278 132682571 -7634194 + AluSc SINE Alu 1 295 -14 287 280 101 37 chr10 132682571 132682776 -7633989 + L1ME4a LINE L1 5888 6115 -6 467 267 102 5 chr10 132683784 132683990 -7632775 - L1ME LINE L1 -307 5814 5589 * 37320 78 10 7 chr10 132683981 132690112 -7626653 - L1PA6 LINE L1 0 6154 11 359 190 298 25 chr10 132690234 132690355 -7626410 - L1ME4a LINE L1 -8 6113 5960 435 19 0 0 chr10 132690359 132690411 -7626354 + (CA)n Simple_repeat Simple_repeat 2 53 0 2341 112 3 0 chr10 132690992 132691296 -7625469 + AluSc SINE Alu 1 305 -4 354 307 78 13 chr10 132692335 132692488 -7624277 + MIR SINE MIR 86 248 -14 246 32 0 0 chr10 132692683 132692714 -7624051 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 296 301 12 0 chr10 132692849 132692932 -7623833 + CT-rich Low_complexity Low_complexity 2 85 0 397 343 165 4 chr10 132692961 132693209 -7623556 + L2 LINE L2 2985 3272 0 195 317 117 8 chr10 132693808 132693928 -7622837 - L2 LINE L2 -229 3084 2952 223 208 8 50 chr10 132694848 132694968 -7621797 + (TATATG)n Simple_repeat Simple_repeat 6 120 0 268 412 7 0 chr10 132694988 132695124 -7621641 + (TG)n Simple_repeat Simple_repeat 1 137 0 192 200 0 0 chr10 132695131 132695161 -7621604 - L3b LINE CR1 -275 1308 1279 21 57 0 0 chr10 132695913 132695948 -7620817 + AT_rich Low_complexity Low_complexity 1 35 0 181 154 211 0 chr10 132696253 132696305 -7620460 + MIR SINE MIR 81 143 -65 664 252 86 50 chr10 132696455 132696677 -7620088 + MIR SINE MIR 30 259 -3 247 254 25 59 chr10 132696818 132696936 -7619829 + L1ME4a LINE L1 5970 6083 -38 189 240 80 0 chr10 132698075 132698125 -7618640 + L2 LINE L2 3207 3260 -12 304 267 29 29 chr10 132700203 132700308 -7616457 - L3 LINE CR1 -354 1223 1119 372 254 15 52 chr10 132706092 132706226 -7610539 - MIR SINE MIR -62 146 18 187 261 76 43 chr10 132708243 132708335 -7608430 - MIR SINE MIR -84 124 30 354 321 22 7 chr10 132708508 132708645 -7608120 + MIR SINE MIR 14 152 -110 386 297 137 30 chr10 132709749 132710012 -7606753 + LTR16A LTR ERVL 160 450 0 618 214 6 63 chr10 132710013 132710172 -7606593 - MIR SINE MIR -44 218 69 396 279 158 12 chr10 132710234 132710399 -7606366 + MER5A DNA MER1_type 1 189 0 3983 160 20 20 chr10 132710705 132711442 -7605323 - L1MB3 LINE L1 -16 6167 5431 1972 108 36 0 chr10 132711470 132711748 -7605017 - AluSx SINE Alu -24 288 1 396 214 182 19 chr10 132712499 132712658 -7604107 - MER5A DNA MER1_type 0 189 5 235 355 12 41 chr10 132713066 132713238 -7603527 - MIR SINE MIR -49 213 47 296 313 73 0 chr10 132713484 132713580 -7603185 + MIR SINE MIR 40 142 -66 641 324 29 41 chr10 132715052 132715261 -7601504 - L1ME4a LINE L1 -81 6040 5830 2206 109 0 0 chr10 132715261 132715564 -7601201 - AluSx SINE Alu -9 303 1 641 324 29 41 chr10 132715564 132715796 -7600969 - L1ME4a LINE L1 -291 5830 5604 1320 288 63 49 chr10 132716498 132717068 -7599697 + MLT1K LTR MaLR 11 588 0 2101 120 0 13 chr10 132718370 132718686 -7598079 + AluSx SINE Alu 1 312 0 1618 269 98 38 chr10 132718698 132719133 -7597632 + L1MEc LINE L1 809 1217 -4998 1780 148 178 6 chr10 132719133 132719498 -7597267 - MSTA LTR MaLR 0 428 1 1618 269 98 38 chr10 132719498 132721054 -7595711 + L1MEc LINE L1 1217 2892 -3323 23 0 0 0 chr10 132721054 132721077 -7595688 + AT_rich Low_complexity Low_complexity 1 23 0 1782 147 18 3 chr10 132721077 132721363 -7595402 - AluSx SINE Alu -22 290 1 403 75 0 0 chr10 132721363 132721416 -7595349 - AluSq/x SINE Alu -178 135 83 947 272 58 28 chr10 132721862 132722325 -7594440 + L1MEc LINE L1 3437 3913 -2302 * 5427 248 86 44 chr10 132722312 132722333 -7594432 + L1ME3A LINE L1 2955 2974 -3196 1780 168 0 9 chr10 132722333 132722648 -7594117 + AluJo SINE Alu 1 312 0 5427 248 86 44 chr10 132722648 132723505 -7593260 + L1ME3A LINE L1 2974 3794 -2376 2496 57 0 0 chr10 132723505 132723804 -7592961 + AluY SINE Alu 1 299 -12 5427 248 86 44 chr10 132723804 132725708 -7591057 + L1ME3A LINE L1 3794 5874 -296 200 79 53 0 chr10 132725710 132725748 -7591017 + T-rich Low_complexity Low_complexity 3 42 0 693 228 50 56 chr10 132725856 132725983 -7590782 + L1ME3A LINE L1 5829 5955 -215 2157 91 10 0 chr10 132725983 132726281 -7590484 + AluSp SINE Alu 1 301 -12 693 228 50 56 chr10 132726281 132726444 -7590321 + L1ME3A LINE L1 5955 6126 -44 2132 145 38 15 chr10 132726734 132727126 -7589639 - L1MC1 LINE L1 0 6333 5933 2578 125 20 0 chr10 132727253 132727653 -7589112 - L1MC1 LINE L1 -445 5888 5481 323 253 0 61 chr10 132728602 132728701 -7588064 + MIR SINE MIR 50 142 -120 2170 86 3 32 chr10 132728711 132729024 -7587741 + AluSp SINE Alu 1 304 -9 635 153 104 49 chr10 132730353 132730497 -7586268 - MER20 DNA MER1_type -67 152 1 21 0 0 0 chr10 132730772 132730793 -7585972 + AT_rich Low_complexity Low_complexity 1 21 0 1535 153 33 27 chr10 132731179 132731480 -7585285 - AluJo SINE Alu -9 303 1 1094 236 113 37 chr10 132731595 132732027 -7584738 - MLT1C LTR MaLR 0 467 3 7218 58 0 0 chr10 132732272 132733297 -7583468 - L1PA6 LINE L1 0 6154 5128 281 59 0 59 chr10 132735240 132735291 -7581474 + Alu SINE Alu 1 48 -253 26 30 0 0 chr10 132735378 132735411 -7581354 + AT_rich Low_complexity Low_complexity 1 33 0 2068 70 7 18 chr10 132735937 132736223 -7580542 - AluY SINE Alu -28 283 1 1167 167 8 30 chr10 132736386 132736620 -7580145 + L1M3 LINE L1 5300 5528 -652 1986 85 50 3 chr10 132736626 132736908 -7579857 + AluSq SINE Alu 6 300 -13 2052 92 0 11 chr10 132737589 132737872 -7578893 + AluSc SINE Alu 1 280 -29 252 0 0 0 chr10 132737982 132738010 -7578755 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 265 61 20 chr10 132738269 132738367 -7578398 - MIR SINE MIR -60 202 101 884 121 8 0 chr10 132738452 132738584 -7578181 - AluJo SINE Alu -177 135 3 457 178 14 0 chr10 132738585 132738658 -7578107 + MER45A DNA AcHobo 105 178 0 989 53 22 155 chr10 132739650 132739761 -7577004 + L1MB3 LINE L1 5961 6028 -155 1861 122 0 73 chr10 132739761 132740090 -7576675 + AluSx SINE Alu 1 305 -7 989 53 22 155 chr10 132740090 132740204 -7576561 + L1MB3 LINE L1 6028 6156 -27 380 297 23 16 chr10 132741016 132741144 -7575621 - L1MC4 LINE L1 -124 7918 7790 1054 258 85 0 chr10 132741197 132741492 -7575273 + MER5C DNA MER1_type 1 320 -4 304 254 45 9 chr10 132741498 132741608 -7575157 - L1MC4 LINE L1 -297 7745 7632 822 198 36 24 chr10 132742282 132742449 -7574316 + MER45A DNA AcHobo 8 176 -2 362 230 18 44 chr10 132742795 132742908 -7573857 + LTR16C LTR ERVL 382 491 0 258 259 74 28 chr10 132742961 132743069 -7573696 + MIR SINE MIR 144 256 -6 1310 199 158 50 chr10 132743163 132743233 -7573532 - MLT1C LTR MaLR 0 467 406 2132 97 3 3 chr10 132743233 132743533 -7573232 + AluSc SINE Alu 1 300 -9 1310 199 158 50 chr10 132743533 132743879 -7572886 - MLT1C LTR MaLR -61 406 6 345 313 52 9 chr10 132744177 132744292 -7572473 - L2 LINE L2 0 3272 3153 315 344 80 7 chr10 132744484 132744635 -7572130 + MIR3 SINE MIR 29 190 -18 447 204 66 139 chr10 132744655 132744767 -7571998 - MIR SINE MIR -11 251 132 2036 128 0 0 chr10 132744767 132745057 -7571708 - AluSx SINE Alu -22 290 1 2030 132 3 0 chr10 132745067 132745370 -7571395 - AluSx SINE Alu -8 304 1 447 204 66 139 chr10 132745370 132745510 -7571255 - MIR SINE MIR -139 123 2 1883 84 4 0 chr10 132745530 132745780 -7570985 - AluSq SINE Alu -45 268 18 2077 110 0 3 chr10 132745786 132746078 -7570687 - AluSg SINE Alu -18 292 2 563 185 8 34 chr10 132746091 132746210 -7570555 - FLAM_A SINE Alu -19 123 8 396 146 13 78 chr10 132746218 132746306 -7570459 + AluJ/FLAM SINE Alu 1 68 -234 739 175 0 24 chr10 132746446 132746572 -7570193 - FLAM_C SINE Alu -19 124 2 632 301 48 0 chr10 132746958 132747164 -7569601 + LTR33 LTR ERVL 2 217 -304 1253 153 5 5 chr10 132747268 132747515 -7569250 + AluSg/x SINE Alu 79 325 0 853 176 0 14 chr10 132747520 132747662 -7569103 - FAM SINE Alu -45 140 1 391 288 53 23 chr10 132748637 132748769 -7567996 + L1MC/D LINE L1 5460 5595 -2213 2803 145 20 2 chr10 132748776 132749231 -7567534 + L1MB2 LINE L1 5366 5828 -343 1188 41 0 0 chr10 132749336 132749482 -7567283 - L1P LINE L1 -1652 4494 4349 215 61 30 0 chr10 132749963 132749996 -7566769 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 237 244 39 0 chr10 132750018 132750096 -7566669 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 207 281 12 37 chr10 132750101 132750183 -7566582 + CT-rich Low_complexity Low_complexity 4 83 0 198 231 0 0 chr10 132750200 132750265 -7566500 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 201 288 0 0 chr10 132750283 132750342 -7566423 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 422 231 0 126 chr10 132750342 132750444 -7566321 - L2 LINE L2 0 3313 3232 725 186 40 45 chr10 132750444 132750621 -7566144 - MER69A DNA AcHobo 0 177 2 422 231 0 126 chr10 132750621 132750661 -7566104 - L2 LINE L2 -81 3232 3189 2269 96 23 0 chr10 132750723 132751026 -7565739 + THE1C LTR MaLR 1 310 -65 2088 135 25 33 chr10 132751019 132751414 -7565351 - MLT2A2 LTR ERVL -149 304 1 * 1867 129 14 0 chr10 132752218 132752497 -7564268 + AluSx SINE Alu 15 297 -15 1951 108 30 17 chr10 132752519 132752838 -7563927 + AluSx SINE Alu 1 312 0 200 33 0 33 chr10 132752861 132752891 -7563874 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1671 158 10 10 chr10 132753794 132754092 -7562673 - AluJb SINE Alu -14 298 1 21 57 0 0 chr10 132755147 132755182 -7561583 + AT_rich Low_complexity Low_complexity 1 35 0 185 227 82 41 chr10 132755745 132755842 -7560923 + L2 LINE L2 2837 2937 -335 * 197 309 86 37 chr10 132755839 132755920 -7560845 + L2 LINE L2 3188 3272 0 384 273 62 43 chr10 132755954 132756115 -7560650 + MIR SINE MIR 20 183 -79 2308 93 3 0 chr10 132756279 132756581 -7560184 - AluSp SINE Alu -8 305 3 201 196 0 65 chr10 132756829 132756875 -7559890 - L2 LINE L2 -23 3249 3207 648 196 112 24 chr10 132756956 132757255 -7559510 - MSTD LTR MaLR -3 393 6 2226 91 0 0 chr10 132757587 132757883 -7558882 + AluY SINE Alu 1 296 -15 226 225 0 0 chr10 132757897 132757937 -7558828 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 193 370 100 0 chr10 132757940 132758040 -7558725 - L2 LINE L2 -5 3267 3158 277 251 140 85 chr10 132758360 132758549 -7558216 - MIR SINE MIR 0 262 56 1805 135 101 26 chr10 132758549 132758896 -7557869 + THE1C LTR MaLR 3 375 0 277 251 140 85 chr10 132758896 132758941 -7557824 - MIR SINE MIR -206 56 15 207 0 0 0 chr10 132760216 132760239 -7556526 + (TG)n Simple_repeat Simple_repeat 2 24 0 284 286 71 40 chr10 132760402 132760528 -7556237 + L2 LINE L2 3142 3271 -1 216 252 97 78 chr10 132760679 132760782 -7555983 + MIR3 SINE MIR 72 176 -32 268 114 68 0 chr10 132760803 132760847 -7555918 + L2 LINE L2 3267 3313 0 2258 100 3 10 chr10 132761544 132761843 -7554922 + AluSq SINE Alu 1 297 -16 865 137 15 88 chr10 132762861 132763065 -7553700 + MER53 DNA DNA 1 189 0 2313 104 0 16 chr10 132763068 132763376 -7553389 - AluSx SINE Alu -9 303 1 5493 124 43 40 chr10 132764457 132765421 -7551344 - L1MA4A LINE L1 0 6303 5321 2470 75 0 3 chr10 132765421 132765726 -7551039 - AluY SINE Alu -7 304 1 5493 124 43 40 chr10 132765726 132766128 -7550637 - L1MA4A LINE L1 -982 5321 4922 1715 176 3 27 chr10 132766162 132766457 -7550308 + AluJo SINE Alu 1 288 -24 2181 125 26 0 chr10 132766467 132766771 -7549994 + AluSx SINE Alu 1 312 0 327 266 43 58 chr10 132766886 132767025 -7549740 + MIR SINE MIR 3 139 -69 667 187 86 7 chr10 132767081 132767220 -7549545 - MIR SINE MIR -20 242 93 594 231 0 0 chr10 132767550 132767719 -7549046 + (TG)n Simple_repeat Simple_repeat 2 170 0 1328 223 68 25 chr10 132771525 132771920 -7544845 + L1ME2 LINE L1 5524 5935 -229 554 202 52 105 chr10 132771947 132772195 -7544570 + L1ME2 LINE L1 5900 6134 -30 2253 132 6 0 chr10 132772859 132773170 -7543595 - AluSq SINE Alu 0 313 1 640 194 112 21 chr10 132773502 132773800 -7542965 + MSTD LTR MaLR 6 393 -3 194 241 194 37 chr10 132773833 132773941 -7542824 + L2 LINE L2 3139 3263 -9 2462 93 3 0 chr10 132774175 132774477 -7542288 + AluSp SINE Alu 3 305 -8 396 273 62 43 chr10 132774641 132774802 -7541963 - MIR SINE MIR -79 183 20 197 309 86 37 chr10 132774836 132774917 -7541848 - L2 LINE L2 0 3272 3188 193 227 82 41 chr10 132774914 132775011 -7541754 - L2 LINE L2 -335 2937 2837 * 21 57 0 0 chr10 132775574 132775609 -7541156 + AT_rich Low_complexity Low_complexity 1 35 0 1818 158 10 10 chr10 132776664 132776962 -7539803 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr10 132827019 132827042 -7489723 + (CA)n Simple_repeat Simple_repeat 1 23 0 195 204 0 0 chr10 132827120 132827164 -7489601 + (TA)n Simple_repeat Simple_repeat 2 45 0 2344 85 0 10 chr10 132828219 132828525 -7488240 - AluSx SINE Alu -9 303 1 1527 188 17 6 chr10 132828545 132828890 -7487875 - L1M4 LINE L1 -1200 4946 4598 21 0 0 0 chr10 132829494 132829515 -7487250 + AT_rich Low_complexity Low_complexity 1 21 0 670 292 51 58 chr10 132829808 132830219 -7486546 + L1MC4a LINE L1 5523 5930 -1878 42 0 0 0 chr10 132830419 132830461 -7486304 + AT_rich Low_complexity Low_complexity 1 42 0 310 223 0 45 chr10 132830469 132830581 -7486184 - L1ME4a LINE L1 -59 6062 5956 1212 186 21 115 chr10 132831034 132831372 -7485393 - AluYb8 SINE Alu -11 307 2 192 261 14 58 chr10 132831459 132831528 -7485237 - L2 LINE L2 -1 3271 3206 419 347 71 6 chr10 132831680 132831850 -7484915 - MIR SINE MIR -16 246 66 212 296 153 10 chr10 132831855 132831953 -7484812 - MIR SINE MIR -74 188 77 481 275 141 36 chr10 132832429 132832569 -7484196 + MLT1K LTR MaLR 169 293 -295 2673 118 36 7 chr10 132832569 132832985 -7483780 + MSTA LTR MaLR 1 428 0 481 275 141 36 chr10 132832985 132833120 -7483645 + MLT1K LTR MaLR 293 473 -115 1516 55 0 0 chr10 132833534 132833716 -7483049 - AluY SINE Alu -7 304 123 273 291 0 12 chr10 132833719 132833805 -7482960 - MER63 DNA MER1_type 0 1060 976 421 263 17 0 chr10 132833809 132833927 -7482838 - MER63 DNA MER1_type -316 746 1 2540 250 36 18 chr10 132833966 132834967 -7481798 - L1ME3 LINE L1 -23 6139 5119 289 253 102 121 chr10 132836172 132836338 -7480427 - MIR SINE MIR -71 191 29 514 205 50 2 chr10 132837146 132837359 -7479406 + MSTD LTR MaLR 1 262 -134 264 167 0 0 chr10 132837468 132837516 -7479249 + (TA)n Simple_repeat Simple_repeat 1 48 0 1265 184 142 6 chr10 132837623 132837955 -7478810 + MLT1B LTR MaLR 1 377 -13 350 186 43 0 chr10 132838075 132838145 -7478620 + MLT1L LTR MaLR 198 270 -345 304 189 89 11 chr10 132838302 132838392 -7478373 + MLT1L LTR MaLR 477 573 -42 32 43 0 0 chr10 132838818 132838864 -7477901 + AT_rich Low_complexity Low_complexity 1 46 0 426 62 0 0 chr10 132838864 132838928 -7477837 - L1MA2 LINE L1 0 6304 6241 2681 203 35 5 chr10 132839161 132839741 -7477024 + L1MB7 LINE L1 5575 6171 -13 2106 111 0 0 chr10 132839877 132840156 -7476609 - AluSx SINE Alu -33 279 1 4694 145 28 31 chr10 132840182 132841049 -7475716 - MER6 DNA MER2_type 0 865 2 1759 189 31 3 chr10 132841388 132841775 -7474990 - L1MC3 LINE L1 -8 7777 7380 2218 106 0 0 chr10 132841853 132842146 -7474619 - AluSx SINE Alu -19 293 1 324 185 49 0 chr10 132842152 132842233 -7474532 - L1ME3A LINE L1 -67 6103 6019 312 221 8 107 chr10 132842259 132842311 -7474454 - L1MC4 LINE L1 -1254 6788 6753 2094 177 10 0 chr10 132842311 132842695 -7474070 + MLT1B LTR MaLR 1 388 -2 312 221 8 107 chr10 132842695 132842764 -7474001 - L1MC4 LINE L1 -1289 6753 6679 693 305 59 63 chr10 132842866 132842943 -7473822 + L1M4 LINE L1 2115 2191 -3955 2212 126 10 0 chr10 132842943 132843252 -7473513 + AluSx SINE Alu 1 312 0 693 305 59 63 chr10 132843252 132843820 -7472945 + L1M4 LINE L1 2191 2757 -3389 332 324 82 27 chr10 132843870 132845100 -7471665 + L1M4 LINE L1 2859 4156 -1990 1150 191 0 0 chr10 132845199 132845409 -7471356 + MER2 DNA MER2_type 1 210 -135 12051 194 30 5 chr10 132845427 132847750 -7469015 + L1PA16 LINE L1 2723 5192 -1677 225 94 0 0 chr10 132847750 132847782 -7468983 + (CA)n Simple_repeat Simple_repeat 2 33 0 12051 194 30 5 chr10 132847782 132849493 -7467272 + L1PA16 LINE L1 5192 6859 -10 2366 85 0 28 chr10 132849493 132849848 -7466917 + AluSq SINE Alu 1 313 0 28 0 0 0 chr10 132849902 132849930 -7466835 + AT_rich Low_complexity Low_complexity 1 28 0 391 288 84 5 chr10 132849990 132850181 -7466584 + L1M4 LINE L1 4279 4484 -1662 423 348 67 18 chr10 132850256 132850584 -7466181 + L1M4 LINE L1 4493 4836 -1310 372 253 20 20 chr10 132851187 132851286 -7465479 + MER5B DNA MER1_type 5 103 -75 212 233 0 0 chr10 132851278 132851321 -7465444 - MER5B DNA MER1_type -135 43 1 * 895 163 0 0 chr10 132852047 132852188 -7464577 - FLAM_C SINE Alu -2 141 1 1649 238 84 18 chr10 132852252 132852823 -7463942 - MLT1L LTR MaLR -2 613 5 1893 27 0 0 chr10 132852874 132853098 -7463667 + L1PA5 LINE L1 5931 6154 0 518 277 83 14 chr10 132853198 132853487 -7463278 - HAL1 LINE L1 -848 1659 1351 453 207 0 0 chr10 132853644 132853731 -7463034 + MER58B DNA MER1_type 1 87 -254 731 145 138 19 chr10 132853737 132853896 -7462869 + MSTA LTR MaLR 200 377 -51 1135 162 51 8 chr10 132853908 132854142 -7462623 + MER58B DNA MER1_type 97 340 -1 1564 151 120 0 chr10 132854222 132854480 -7462285 - AluJb SINE Alu -13 289 1 235 268 0 0 chr10 132854588 132854659 -7462106 - L1ME3A LINE L1 -25 6145 6075 3227 245 84 46 chr10 132854660 132856756 -7460009 - L1MD1 LINE L1 -351 5825 3618 1134 291 79 19 chr10 132856912 132857382 -7459383 + L2 LINE L2 2385 2882 -432 229 325 141 0 chr10 132857412 132857575 -7459190 + L2 LINE L2 3118 3303 -10 1672 262 40 12 chr10 132857868 132858618 -7458147 - L2 LINE L2 -21 3292 2527 1629 250 17 58 chr10 132858674 132858744 -7458021 - L1MD1 LINE L1 -5378 692 621 2348 91 0 7 chr10 132858744 132859041 -7457724 - AluSx SINE Alu -17 295 1 1629 250 17 58 chr10 132859041 132859611 -7457154 - L1MD1 LINE L1 -5449 621 78 1290 275 139 17 chr10 132859631 132860097 -7456668 - L2 LINE L2 -744 2570 2048 813 136 42 0 chr10 132860098 132860216 -7456549 + FLAM_C SINE Alu 1 123 -20 630 168 133 82 chr10 132860283 132860400 -7456365 - L2 LINE L2 -1301 2013 1881 2219 120 7 0 chr10 132860400 132860708 -7456057 - AluSq SINE Alu -3 310 1 630 168 133 82 chr10 132860708 132860786 -7455979 - L2 LINE L2 -1433 1881 1808 479 291 86 58 chr10 132861765 132862057 -7454708 + L2 LINE L2 2995 3294 -19 191 235 78 0 chr10 132862055 132862106 -7454659 - MIR SINE MIR -109 153 99 * 813 300 126 28 chr10 132862199 132862658 -7454107 + MLT1H1 LTR MaLR 3 506 -49 538 194 223 0 chr10 132862658 132862797 -7453968 - MER96 DNA MER1_type? 0 175 6 301 188 47 59 chr10 132863062 132863147 -7453618 - L2 LINE L2 -9 3263 3180 898 139 7 0 chr10 132863384 132863521 -7453244 + FLAM_C SINE Alu 1 138 -5 2097 145 25 30 chr10 132863781 132864147 -7452618 + THE1B LTR MaLR 1 364 0 391 228 123 57 chr10 132864910 132865121 -7451644 - MER102a DNA MER1_type 0 330 106 223 262 64 43 chr10 132865177 132865318 -7451447 + MIR3 SINE MIR 29 172 -36 315 307 138 21 chr10 132866079 132866268 -7450497 - MIR SINE MIR -23 239 29 225 281 31 62 chr10 132866276 132866404 -7450361 - MIR3 SINE MIR -27 181 58 747 191 29 0 chr10 132870559 132870695 -7446070 - MER58B DNA MER1_type 0 341 202 432 229 7 71 chr10 132870765 132870905 -7445860 - L2 LINE L2 -1 3312 3182 463 232 5 108 chr10 132871263 132871448 -7445317 + MIR SINE MIR 90 255 -7 1454 350 58 13 chr10 132871791 132872789 -7443976 + ERVL LTR ERVL 3841 4883 -881 2193 171 51 80 chr10 132872807 132873379 -7443386 + L1MC3 LINE L1 7224 7778 -7 2202 104 16 13 chr10 132873739 132874048 -7442717 - AluSg SINE Alu 0 310 1 3783 200 4 38 chr10 132874188 132875088 -7441677 - L1PB1 LINE L1 -1024 5122 4253 5894 92 38 3 chr10 132875092 132875736 -7441029 + L1PB1 LINE L1 5128 5816 -335 225 0 0 0 chr10 132875736 132875761 -7441004 + (TA)n Simple_repeat Simple_repeat 2 26 0 5894 92 38 3 chr10 132875761 132876108 -7440657 + L1PB1 LINE L1 5816 6149 -2 380 63 0 48 chr10 132876118 132876181 -7440584 + L1PB1 LINE L1 6090 6149 -2 282 143 107 0 chr10 132876262 132876318 -7440447 + LTR33 LTR ERVL 451 512 -9 376 278 76 7 chr10 132876327 132876471 -7440294 - HAL1 LINE L1 -923 1584 1431 625 249 171 86 chr10 132876529 132877074 -7439691 - MLT1L LTR MaLR 0 615 25 549 264 81 91 chr10 132877131 132877734 -7439031 - HAL1 LINE L1 -1166 1341 745 273 275 61 61 chr10 132878186 132878317 -7438448 - HAL1 LINE L1 -2371 136 6 1578 195 7 14 chr10 132878378 132878670 -7438095 - AluJb SINE Alu -21 291 2 2424 184 28 2 chr10 132878679 132879147 -7437618 - L1MB2 LINE L1 -2 6169 5690 217 204 112 82 chr10 132879337 132879435 -7437330 - MIR SINE MIR -92 170 70 261 147 27 80 chr10 132881096 132881171 -7435594 + CT-rich Low_complexity Low_complexity 1 71 0 186 229 0 0 chr10 132881290 132881338 -7435427 + L2 LINE L2 2201 2248 -1066 921 188 0 39 chr10 132881584 132881765 -7435000 - FAM SINE Alu 0 175 2 2173 103 33 3 chr10 132881869 132882170 -7434595 + AluSx SINE Alu 1 310 -2 389 266 53 61 chr10 132882582 132882681 -7434084 - L1MB2 LINE L1 -623 5541 5443 2314 119 0 0 chr10 132882681 132882993 -7433772 + AluSx SINE Alu 1 312 0 389 266 53 61 chr10 132882993 132883156 -7433609 - L1MB2 LINE L1 -721 5443 5281 * 708 265 52 35 chr10 132883155 132883578 -7433187 + L1MD3 LINE L1 4075 4504 -1642 659 296 91 37 chr10 132883574 132883676 -7433089 + L1MD3 LINE L1 5383 5478 -2330 * 2923 148 79 2 chr10 132883676 132883714 -7433051 - MLT2B1 LTR ERVL -2 518 484 381 70 0 0 chr10 132883714 132883771 -7432994 + (TA)n Simple_repeat Simple_repeat 1 57 0 2923 148 79 2 chr10 132883771 132884213 -7432552 - MLT2B1 LTR ERVL -36 484 1 659 296 91 37 chr10 132884213 132884588 -7432177 + L1MD3 LINE L1 5478 5800 -2008 479 211 31 23 chr10 132884594 132884722 -7432043 - LTR16C LTR ERVL 0 491 363 2237 95 7 30 chr10 132885028 132885332 -7431433 - AluSq SINE Alu -16 297 1 929 220 6 0 chr10 132885443 132885625 -7431140 - MER5A DNA MER1_type -5 184 2 233 342 42 0 chr10 132886523 132886643 -7430122 + L2 LINE L2 2934 3058 -214 1588 271 71 4 chr10 132887395 132887930 -7428835 + L1ME3A LINE L1 5597 6167 -3 301 287 70 20 chr10 132888159 132888403 -7428362 + L1MC4a LINE L1 4915 5170 -976 2050 176 47 11 chr10 132888536 132888917 -7427848 - MSTD LTR MaLR -1 395 1 1717 259 80 53 chr10 132888920 132889747 -7427018 + L1MC4a LINE L1 5267 6115 -1693 1789 126 0 98 chr10 132890426 132890563 -7426202 + AluJb SINE Alu 15 103 -209 2504 46 0 30 chr10 132890563 132890866 -7425899 + AluY SINE Alu 1 294 -17 1789 126 0 98 chr10 132890866 132891054 -7425711 + AluJb SINE Alu 103 308 -4 22 0 0 0 chr10 132891399 132891421 -7425344 + AT_rich Low_complexity Low_complexity 1 22 0 293 0 27 0 chr10 132891987 132892024 -7424741 + (GA)n Simple_repeat Simple_repeat 1 38 0 199 302 85 9 chr10 132892139 132892245 -7424520 + MIR SINE MIR 30 143 -65 258 259 116 36 chr10 132892479 132892703 -7424062 + L2 LINE L2 2713 2954 -360 264 270 169 0 chr10 132892781 132892870 -7423895 + L2 LINE L2 3210 3313 0 2057 149 48 25 chr10 132893271 132893627 -7423138 - THE1B LTR MaLR 0 364 1 11328 80 68 1 chr10 132893627 132895109 -7421656 - THE1B-int LTR MaLR 0 1580 1 2060 128 54 25 chr10 132895110 132895463 -7421302 - THE1B LTR MaLR -1 363 1 488 119 0 0 chr10 132896082 132896149 -7420616 + AluS SINE Alu 2 68 -245 2218 126 0 0 chr10 132896492 132896793 -7419972 - AluSx SINE Alu -11 301 1 244 263 23 68 chr10 132897210 132897392 -7419373 - L2 LINE L2 -4 3268 3005 231 319 22 22 chr10 132897450 132897585 -7419180 + LTR33 LTR ERVL 384 518 -3 366 250 20 0 chr10 132898212 132898312 -7418453 - MLT1J1 LTR MaLR 0 446 345 254 246 15 15 chr10 132898423 132898488 -7418277 - MLT1I LTR MaLR -249 160 96 6885 215 67 29 chr10 132898823 132901102 -7415663 + L1M4 LINE L1 1 2192 -4452 2373 109 7 0 chr10 132901102 132901406 -7415359 + AluSx SINE Alu 1 306 -6 6885 215 67 29 chr10 132901406 132903265 -7413500 + L1M4 LINE L1 2192 4416 -2228 281 265 24 0 chr10 132903266 132903349 -7413416 + MIR SINE MIR 47 131 -131 180 206 0 103 chr10 132903422 132903490 -7413275 - MER5A DNA MER1_type -78 111 51 196 267 0 0 chr10 132904118 132904163 -7412602 + L2 LINE L2 3261 3305 -8 24 32 0 0 chr10 132905275 132905306 -7411459 + AT_rich Low_complexity Low_complexity 1 31 0 1756 115 6 101 chr10 132906373 132906739 -7410026 - L1MB8 LINE L1 -6 6172 5842 2470 94 0 0 chr10 132908382 132908689 -7408076 + AluSq SINE Alu 1 307 -6 2509 125 5 23 chr10 132909397 132909790 -7406975 - MLT1B LTR MaLR 0 467 5 939 217 25 0 chr10 132909898 132910101 -7406664 + MER63A DNA MER1_type 3 210 0 985 165 61 0 chr10 132910695 132910859 -7405906 + MER20 DNA MER1_type 4 177 -42 939 306 105 39 chr10 132910961 132911903 -7404862 + L1MEd LINE L1 596 1597 -4532 895 190 78 17 chr10 132912490 132912722 -7404043 - LTR16C LTR ERVL 0 491 246 8226 189 34 8 chr10 132913821 132914451 -7402314 - L1PA15 LINE L1 -1 6815 6203 1596 217 10 0 chr10 132914451 132914750 -7402015 - AluJb SINE Alu -10 302 1 8226 189 34 8 chr10 132914750 132916031 -7400734 - L1PA15 LINE L1 -613 6203 4796 279 0 0 0 chr10 132916031 132916062 -7400703 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 8226 189 34 8 chr10 132916062 132916524 -7400241 - L1PA15 LINE L1 -2020 4796 4348 5690 246 39 29 chr10 132916626 132917334 -7399431 - L1PA15 LINE L1 -2947 3850 3151 2311 98 0 7 chr10 132917334 132917629 -7399136 - AluSq SINE Alu -20 293 1 5690 246 39 29 chr10 132917629 132919418 -7397347 - L1PA15 LINE L1 -3646 3151 1327 2267 286 19 45 chr10 132919452 132920245 -7396520 - L1PA15 LINE L1 -6011 776 5 361 312 120 49 chr10 132920330 132920945 -7395820 + L1MEd LINE L1 2412 3070 -3059 303 156 62 31 chr10 132920946 132921010 -7395755 + L1MC1 LINE L1 6268 6333 0 299 341 53 29 chr10 132921057 132921549 -7395216 + L1MEd LINE L1 3127 3630 -2499 730 276 82 32 chr10 132922048 132922652 -7394113 - L1MC/D LINE L1 -804 5342 4960 21 0 0 0 chr10 132923030 132923051 -7393714 + AT_rich Low_complexity Low_complexity 1 21 0 2545 80 3 0 chr10 132923165 132923476 -7393289 - AluSp SINE Alu -1 312 1 21 0 0 0 chr10 132923649 132923670 -7393095 + AT_rich Low_complexity Low_complexity 1 21 0 780 304 17 17 chr10 132923718 132923958 -7392807 - MIR SINE MIR -2 260 21 1181 279 46 32 chr10 132924002 132924731 -7392034 - L1ME LINE L1 -4834 1246 526 483 314 21 21 chr10 132925031 132925222 -7391543 - L1ME LINE L1 -5626 444 254 1948 129 7 14 chr10 132925365 132925652 -7391113 - AluJb SINE Alu -18 294 10 309 51 0 0 chr10 132925919 132925958 -7390807 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 1342 157 32 0 chr10 132925962 132926179 -7390586 - AluJb SINE Alu -4 308 85 995 229 22 0 chr10 132926179 132926410 -7390355 - Charlie1b DNA MER1_type -211 312 77 24 32 0 0 chr10 132926503 132926534 -7390231 + AT_rich Low_complexity Low_complexity 1 31 0 312 231 32 92 chr10 132926647 132926788 -7389977 - MIR SINE MIR -59 149 20 2054 142 3 0 chr10 132928479 132928775 -7387990 - AluJb SINE Alu -15 297 1 204 40 0 0 chr10 132928805 132928830 -7387935 + (TG)n Simple_repeat Simple_repeat 2 26 0 1836 118 4 4 chr10 132929148 132929402 -7387363 + AluSc SINE Alu 37 290 -19 3310 238 82 18 chr10 132929648 132930814 -7385951 - L1MDa LINE L1 -2596 3944 2705 40 0 0 0 chr10 132930856 132930896 -7385869 + AT_rich Low_complexity Low_complexity 1 40 0 408 253 0 0 chr10 132930943 132931109 -7385656 + (TA)n Simple_repeat Simple_repeat 1 166 0 1378 135 4 25 chr10 132931130 132931375 -7385390 - L1MA5A LINE L1 -22 6275 6036 246 206 0 79 chr10 132931443 132931506 -7385259 - L1MDa LINE L1 -3890 2650 2593 396 319 116 45 chr10 132934055 132934409 -7382356 - L3 LINE CR1 -23 1554 1176 1972 142 0 39 chr10 132934695 132935043 -7381722 - AluSx SINE Alu 0 312 1 15589 182 67 33 chr10 132935408 132939705 -7377060 - L1MA3 LINE L1 -2 7722 3575 242 150 0 0 chr10 132939705 132939745 -7377020 - AluSx SINE Alu -8 294 255 15589 182 67 33 chr10 132939745 132939817 -7376948 - L1MA3 LINE L1 -4149 3575 3507 1672 171 0 8 chr10 132939817 132940080 -7376685 - AluSx SINE Alu -43 269 9 15589 182 67 33 chr10 132940080 132943445 -7373320 - L1MA3 LINE L1 -4217 3507 17 244 267 175 8 chr10 132943471 132943591 -7373174 - MIR3 SINE MIR -67 141 2 1023 239 141 23 chr10 132945231 132945628 -7371137 - MER113 DNA MER1_type? -44 477 34 192 354 46 0 chr10 132945658 132945723 -7371042 + MIR SINE MIR 40 107 -155 3022 204 56 19 chr10 132946121 132946577 -7370188 - L1ME1 LINE L1 -89 6077 5639 2303 113 0 0 chr10 132946577 132946887 -7369878 + AluSg SINE Alu 1 310 0 3022 204 56 19 chr10 132946887 132947310 -7369455 - L1ME1 LINE L1 -527 5639 5162 211 51 0 51 chr10 132947311 132947350 -7369415 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 605 217 9 9 chr10 132947358 132947473 -7369292 - FLAM_C SINE Alu -27 116 2 2294 205 13 35 chr10 132947475 132948022 -7368743 - L1ME1 LINE L1 -979 5167 4633 2253 56 39 18 chr10 132948567 132948852 -7367913 + AluY SINE Alu 2 292 -19 528 270 0 16 chr10 132949538 132949664 -7367101 - MIR SINE MIR -111 151 28 306 73 0 0 chr10 132950128 132950169 -7366596 + (CA)n Simple_repeat Simple_repeat 1 41 0 439 333 0 0 chr10 132950805 132950928 -7365837 + (CA)n Simple_repeat Simple_repeat 2 124 0 266 232 54 0 chr10 132950928 132950984 -7365781 - MER4-int LTR ERV1 -5428 1170 1112 232 265 88 0 chr10 132951642 132951710 -7365055 + MIR SINE MIR 65 138 -70 2017 151 9 29 chr10 132951711 132952055 -7364710 + MER1B DNA MER1_type 1 337 -2 192 237 0 0 chr10 132952067 132952105 -7364660 + L3b LINE CR1 1520 1557 -26 * 217 240 20 0 chr10 132952073 132952123 -7364642 + MIR3 SINE MIR 147 197 -11 332 301 70 55 chr10 132953134 132953285 -7363480 + L1ME4a LINE L1 5649 5807 -314 1982 190 11 14 chr10 132953285 132953649 -7363116 - MLT1A1 LTR MaLR -2 363 1 332 301 70 55 chr10 132953649 132953753 -7363012 + L1ME4a LINE L1 5807 5908 -213 245 303 74 93 chr10 132953759 132954234 -7362531 - L2 LINE L2 0 3272 2807 190 348 130 21 chr10 132954416 132954993 -7361772 - L2 LINE L2 -1491 1823 1184 1177 228 4 11 chr10 132955372 132955640 -7361125 - L1MD3 LINE L1 0 7995 7730 1729 204 63 34 chr10 132955980 132956427 -7360338 - MLT1C LTR MaLR -2 465 6 336 209 35 35 chr10 132956442 132956528 -7360237 - MIR SINE MIR -64 198 113 2072 116 61 0 chr10 132956528 132956821 -7359944 + AluSx SINE Alu 1 311 -1 180 154 115 19 chr10 132956827 132956879 -7359886 - MIR SINE MIR -79 129 73 292 200 33 56 chr10 132957763 132957853 -7358912 - MLT1K LTR MaLR -32 556 469 639 230 84 34 chr10 132958295 132958498 -7358267 + MIR SINE MIR 51 262 0 1532 147 0 32 chr10 132958676 132958928 -7357837 + AluJb SINE Alu 1 244 -68 216 95 48 24 chr10 132959386 132959428 -7357337 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 252 0 0 0 chr10 132959609 132959637 -7357128 + (TG)n Simple_repeat Simple_repeat 2 29 0 2041 153 0 3 chr10 132959825 132960132 -7356633 - AluSx SINE Alu -6 306 1 387 341 37 0 chr10 132960431 132960595 -7356170 + L1ME4a LINE L1 5653 5822 -299 268 272 58 10 chr10 132960720 132960823 -7355942 + L1ME4a LINE L1 5831 5938 -183 1446 193 125 23 chr10 132961334 132961687 -7355078 - MLT1B LTR MaLR 0 390 2 225 300 150 56 chr10 132961689 132961956 -7354809 + L2 LINE L2 1983 2274 -1040 808 231 92 0 chr10 132961975 132962170 -7354595 + MER20 DNA MER1_type 7 219 0 937 147 11 66 chr10 132963299 132963571 -7353194 - AluSg SINE Alu -14 296 40 284 249 17 22 chr10 132963762 132963943 -7352822 + CT-rich Low_complexity Low_complexity 1 180 0 4188 186 44 29 chr10 132964126 132965165 -7351600 - Zaphod DNA AcHobo -1463 2568 1514 5548 86 26 19 chr10 132965338 132966397 -7350368 - SVA Other Other -520 1033 48 2086 84 0 7 chr10 132968355 132968630 -7348135 + AluY SINE Alu 1 273 -38 2230 103 0 6 chr10 132969722 132970034 -7346731 + AluY SINE Alu 1 310 -1 385 276 62 74 chr10 132970117 132970374 -7346391 - L1ME4a LINE L1 -93 6028 5775 1706 138 7 28 chr10 132971050 132971377 -7345388 + AluSx SINE Alu 1 321 0 306 345 92 0 chr10 132972039 132972158 -7344607 + L1ME1 LINE L1 331 460 -5610 613 271 24 12 chr10 132972428 132972594 -7344171 + MLT2F LTR ERVL 155 322 -341 363 260 39 0 chr10 132972593 132972697 -7344068 + MLT2F LTR ERVL 527 634 -29 * 8312 221 100 22 chr10 132972733 132973802 -7342963 + L1ME1 LINE L1 2227 3212 -2888 1706 126 4 8 chr10 132973802 132974056 -7342709 - AluSx SINE Alu -59 253 1 8312 221 100 22 chr10 132974056 132974405 -7342360 + L1ME1 LINE L1 3212 3533 -2567 1938 156 113 30 chr10 132974405 132974803 -7341962 + Tigger2a DNA MER2_type 2 432 -2 8312 221 100 22 chr10 132974803 132975771 -7340994 + L1ME1 LINE L1 3533 4424 -1676 1801 139 7 17 chr10 132975771 132976066 -7340699 - AluSx SINE Alu -20 292 1 8312 221 100 22 chr10 132976066 132977249 -7339516 + L1ME1 LINE L1 4424 6092 -8 1063 82 0 44 chr10 132977534 132977692 -7339073 + L1MA2 LINE L1 6154 6304 0 303 370 55 12 chr10 132977774 132978028 -7338737 - L3b LINE CR1 -96 1487 1223 218 320 101 12 chr10 132978173 132978268 -7338497 + MIR SINE MIR 33 136 -72 5523 119 7 31 chr10 132979121 132979824 -7336941 + L1PA15 LINE L1 5335 6016 -149 2160 117 7 0 chr10 132979824 132980133 -7336632 + AluSx SINE Alu 1 311 -1 5523 119 7 31 chr10 132980133 132980280 -7336485 + L1PA15 LINE L1 6016 6165 0 535 248 35 75 chr10 132980283 132980565 -7336200 + L1MC5 LINE L1 7659 7929 -32 409 277 7 58 chr10 132980961 132981116 -7335649 + MIR SINE MIR 11 157 -105 25 31 0 0 chr10 132981300 132981332 -7335433 + AT_rich Low_complexity Low_complexity 1 32 0 297 106 21 0 chr10 132981352 132981399 -7335366 + L1MB4 LINE L1 5432 5479 -821 1766 167 3 7 chr10 132981409 132981709 -7335056 + AluJb SINE Alu 6 304 -8 1929 134 0 20 chr10 132981731 132982030 -7334735 + AluJb SINE Alu 1 293 -19 182 37 37 0 chr10 132982033 132982060 -7334705 + (CAA)n Simple_repeat Simple_repeat 2 29 0 388 217 12 0 chr10 132982064 132982147 -7334618 + L1MB4 LINE L1 5483 5566 -614 1022 165 42 0 chr10 132982147 132982359 -7334406 + L1MB4 LINE L1 5960 6180 0 198 250 192 10 chr10 132982448 132982552 -7334213 + MIR SINE MIR 1 123 -139 198 0 0 0 chr10 132982740 132982762 -7334003 + (TTGTG)n Simple_repeat Simple_repeat 2 23 0 275 233 105 23 chr10 132983616 132983702 -7333063 + MIR SINE MIR 74 166 -96 839 211 54 11 chr10 132984424 132984609 -7332156 + MIR SINE MIR 22 214 -48 464 318 152 42 chr10 132986053 132986822 -7329943 + L2 LINE L2 2383 3224 -48 183 87 0 0 chr10 132988481 132988504 -7328261 + L2 LINE L2 3267 3289 -24 276 30 0 0 chr10 132988512 132988545 -7328220 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 236 253 137 101 chr10 132989164 132989500 -7327265 + L2 LINE L2 2897 3244 -69 343 226 359 10 chr10 132989535 132989730 -7327035 + LTR50 LTR ERVL 1 263 -532 627 120 0 0 chr10 132989755 132989863 -7326902 + (TTTTC)n Simple_repeat Simple_repeat 1 108 0 268 189 27 54 chr10 132989884 132989958 -7326807 + LTR50 LTR ERVL 498 569 -226 275 272 74 0 chr10 132990112 132990193 -7326572 + LTR33A LTR ERVL 437 523 0 625 283 102 0 chr10 132990220 132990386 -7326379 - MIR SINE MIR -21 241 59 209 258 0 16 chr10 132992271 132992333 -7324432 + C-rich Low_complexity Low_complexity 2 62 0 345 291 120 46 chr10 132992901 132993076 -7323689 + MIR SINE MIR 8 195 -67 2263 125 33 39 chr10 132993309 132993669 -7323096 + THE1B LTR MaLR 1 358 -6 474 287 106 21 chr10 132993889 132994104 -7322661 - MIR SINE MIR 0 262 31 247 336 70 8 chr10 132994865 132994993 -7321772 - MIR SINE MIR -43 219 84 255 136 76 45 chr10 132995726 132995792 -7320973 + MER91C DNA MER1_type 50 117 -23 1927 81 4 0 chr10 132997455 132997713 -7319052 + L1PA13 LINE L1 5903 6161 -2 2013 133 7 3 chr10 132997715 132998017 -7318748 + AluSx SINE Alu 1 303 -9 233 260 0 0 chr10 132998268 132998318 -7318447 - L2 LINE L2 -8 3305 3256 199 348 106 28 chr10 133000120 133000261 -7316504 - L2 LINE L2 0 3272 3121 240 326 72 22 chr10 133000280 133000418 -7316347 - L2 LINE L2 -11 3261 3117 469 255 62 21 chr10 133000750 133000895 -7315870 + L2 LINE L2 3158 3308 -5 478 266 28 0 chr10 133001050 133001159 -7315606 - MIR SINE MIR -70 192 81 1171 197 50 9 chr10 133001222 133001529 -7315236 + MLT2D LTR ERVL 25 414 0 473 143 0 0 chr10 133004352 133004462 -7312303 + AluSg/x SINE Alu 210 319 0 839 211 54 11 chr10 133005142 133005327 -7311438 + MIR SINE MIR 22 214 -48 275 233 105 23 chr10 133006432 133006518 -7310247 - MIR SINE MIR -96 166 74 278 56 0 0 chr10 133007033 133007069 -7309696 - AluY SINE Alu -161 140 105 793 71 0 0 chr10 133007112 133007211 -7309554 - AluY SINE Alu -211 100 2 336 190 89 95 chr10 133008121 133008279 -7308486 - MLT1K LTR MaLR -32 556 400 3356 202 65 25 chr10 133008726 133009596 -7307169 + L1ME1 LINE L1 5254 6158 -8 1063 82 0 44 chr10 133009881 133010039 -7306726 + L1MA2 LINE L1 6154 6304 0 305 370 55 12 chr10 133010121 133010375 -7306390 - L3b LINE CR1 -96 1487 1223 188 344 101 12 chr10 133010520 133010615 -7306150 + MIR SINE MIR 33 136 -72 1736 120 153 7 chr10 133011474 133011774 -7304991 - MSTA LTR MaLR -84 344 1 2248 150 16 13 chr10 133011812 133012185 -7304580 + THE1C LTR MaLR 1 374 -1 403 283 248 3 chr10 133012240 133012728 -7304037 - L2 LINE L2 -259 3054 2449 553 279 93 0 chr10 133014081 133014264 -7302501 + L1ME4a LINE L1 5841 6040 -81 25 31 0 0 chr10 133014273 133014305 -7302460 + AT_rich Low_complexity Low_complexity 1 32 0 1735 165 0 7 chr10 133014321 133014630 -7302135 - AluJb SINE Alu -5 307 1 235 298 89 78 chr10 133014656 133015015 -7301750 + MLT1K LTR MaLR 54 416 -172 180 200 0 0 chr10 133016019 133016059 -7300706 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 305 300 90 0 chr10 133016062 133016162 -7300603 - L2 LINE L2 -15 3298 3190 282 289 108 80 chr10 133016327 133016510 -7300255 - L2 LINE L2 -340 2974 2777 1403 189 61 17 chr10 133016510 133016806 -7299959 - AluJo SINE Alu -3 309 1 282 289 108 80 chr10 133016806 133016947 -7299818 - L2 LINE L2 -537 2777 2641 226 296 34 23 chr10 133017049 133017137 -7299628 + L2 LINE L2 3213 3301 -12 573 283 60 11 chr10 133017186 133017370 -7299395 + MIR SINE MIR 54 246 -16 1826 198 65 47 chr10 133017459 133017953 -7298812 + MLT1D LTR MaLR 1 503 -2 14933 208 53 21 chr10 133018585 133022210 -7294555 - Zaphod DNA AcHobo -164 3867 357 2235 98 0 0 chr10 133022210 133022507 -7294258 - AluSg SINE Alu -13 297 1 2300 59 3 0 chr10 133022517 133022804 -7293961 - AluY SINE Alu -21 290 3 14933 208 53 21 chr10 133022804 133022914 -7293851 - Zaphod DNA AcHobo -3682 349 3 334 257 0 14 chr10 133022988 133023062 -7293703 - L2 LINE L2 0 3313 3241 238 311 96 15 chr10 133023092 133023227 -7293538 - L2 LINE L2 -215 3057 2912 3106 177 153 46 chr10 133023369 133024115 -7292650 - LTR1B LTR ERV1 0 826 1 396 230 76 65 chr10 133024149 133024366 -7292399 - MER34 LTR ERV1 -5 778 368 3110 122 69 10 chr10 133024526 133025018 -7291747 + MER4B LTR ERV1 90 610 0 245 235 0 0 chr10 133025122 133025173 -7291592 - MER34 LTR ERV1 -467 75 25 639 219 159 7 chr10 133025268 133025419 -7291346 - MER5A DNA MER1_type -9 180 7 530 191 221 0 chr10 133025468 133025604 -7291161 + MER5B DNA MER1_type 5 170 -8 21 57 0 0 chr10 133026652 133026687 -7290078 + AT_rich Low_complexity Low_complexity 1 35 0 2464 109 62 22 chr10 133027011 133027446 -7289319 + MER1A DNA MER1_type 1 539 0 315 237 141 80 chr10 133028330 133028579 -7288186 + L1MC4a LINE L1 5854 6117 -1691 23 0 0 0 chr10 133028642 133028665 -7288100 + AT_rich Low_complexity Low_complexity 1 23 0 275 97 0 48 chr10 133029126 133029188 -7287577 + L1MB4 LINE L1 6120 6179 -4 392 136 11 45 chr10 133029200 133029288 -7287477 + L1MB8 LINE L1 6093 6177 -1 257 280 84 9 chr10 133029323 133029430 -7287335 + L2 LINE L2 3156 3270 -2 4298 151 73 12 chr10 133029619 133030442 -7286323 + L1MB2 LINE L1 5283 6155 -16 309 211 21 42 chr10 133030492 133030587 -7286178 + L1MC5 LINE L1 7837 7929 -32 15276 127 23 21 chr10 133030595 133033007 -7283758 - Tigger1 DNA MER2_type -1 2417 2 1754 156 23 0 chr10 133033081 133033383 -7283382 + AluJb SINE Alu 1 309 -3 213 171 102 87 chr10 133035541 133035610 -7281155 - MIR SINE MIR -39 169 103 184 272 33 65 chr10 133035946 133036038 -7280727 + L2 LINE L2 3206 3294 -19 381 348 80 0 chr10 133036256 133036394 -7280371 + L2 LINE L2 3123 3271 -1 502 230 28 16 chr10 133036732 133036989 -7279776 + GA-rich Low_complexity Low_complexity 1 260 0 337 254 60 51 chr10 133038181 133038369 -7278396 - MIR SINE MIR -37 225 38 212 288 82 14 chr10 133038381 133038454 -7278311 - MIR SINE MIR -87 175 98 1966 233 76 34 chr10 133038521 133039139 -7277626 - MLT1E2 LTR MaLR -2 624 1 255 333 35 9 chr10 133039427 133039541 -7277224 - L2 LINE L2 -31 3282 3166 754 284 127 17 chr10 133040525 133040910 -7275855 - LTR16A LTR ERVL 0 450 1 304 316 76 19 chr10 133042241 133042399 -7274366 + MLT1H LTR MaLR 383 549 0 229 243 100 14 chr10 133042407 133042477 -7274288 + MIR SINE MIR 118 193 -69 351 61 0 160 chr10 133042909 133042993 -7273772 + MLT1H LTR MaLR 488 549 0 245 370 43 7 chr10 133043186 133043324 -7273441 - MIR SINE MIR -31 231 89 331 263 175 0 chr10 133043836 133043950 -7272815 + MER94 DNA DNA 1 134 0 347 286 85 38 chr10 133044025 133044177 -7272588 - MIR SINE MIR -64 144 16 1866 152 0 10 chr10 133044995 133045297 -7271468 - AluSx SINE Alu -13 299 1 655 236 198 19 chr10 133045815 133046078 -7270687 + LTR16A1 LTR ERVL 147 456 -1 292 282 64 36 chr10 133046495 133046605 -7270160 + L2 LINE L2 3133 3245 -27 237 196 157 29 chr10 133046662 133046764 -7270001 - L2 LINE L2 -218 3054 2940 350 278 11 0 chr10 133047617 133047707 -7269058 + MIR SINE MIR 34 124 -84 238 198 28 132 chr10 133048005 133048111 -7268654 + MIR SINE MIR 161 255 -7 183 232 0 0 chr10 133048177 133048233 -7268532 + (CA)n Simple_repeat Simple_repeat 2 57 0 1407 158 36 0 chr10 133048275 133048497 -7268268 - MER46A DNA MER2_type -6 230 1 284 94 19 0 chr10 133048519 133048572 -7268193 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5437 76 60 45 chr10 133049601 133050441 -7266324 - L1PB1 LINE L1 -1 6150 5299 218 236 0 56 chr10 133050921 133050960 -7265805 + GA-rich Low_complexity Low_complexity 4 39 -32 2057 93 52 3 chr10 133050960 133051249 -7265516 + AluSc SINE Alu 1 303 -6 218 236 0 56 chr10 133051249 133051281 -7265484 + GA-rich Low_complexity Low_complexity 39 71 0 236 333 87 8 chr10 133051302 133051428 -7265337 - MIR SINE MIR -35 227 92 195 290 282 15 chr10 133051748 133051879 -7264886 + MIR SINE MIR 21 186 -22 255 217 50 0 chr10 133052020 133052080 -7264685 - MIR SINE MIR -98 164 102 503 301 10 65 chr10 133052994 133053193 -7263572 - MIR SINE MIR -16 246 59 1384 247 110 25 chr10 133053372 133053882 -7262883 + MLT1H1 LTR MaLR 1 553 -2 451 308 31 6 chr10 133053904 133054063 -7262702 + L1ME4a LINE L1 5516 5678 -443 319 228 34 34 chr10 133054257 133054406 -7262359 + L1ME4a LINE L1 5973 6121 0 210 357 98 9 chr10 133054748 133054860 -7261905 - L2 LINE L2 -2 3270 3149 242 305 33 53 chr10 133054894 133055045 -7261720 + L2 LINE L2 3123 3270 -2 250 348 43 9 chr10 133055595 133055710 -7261055 - MER5A DNA MER1_type 0 189 71 227 229 0 16 chr10 133055866 133055927 -7260838 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 239 152 0 63 chr10 133056151 133056230 -7260535 + GA-rich Low_complexity Low_complexity 3 76 0 446 251 92 36 chr10 133056674 133056869 -7259896 + MER58A DNA MER1_type 19 224 0 2124 124 56 31 chr10 133057035 133057390 -7259375 + THE1B LTR MaLR 1 364 0 213 296 102 0 chr10 133057784 133057892 -7258873 + L2 LINE L2 2421 2539 -775 1800 140 7 17 chr10 133059261 133059553 -7257212 + AluJb SINE Alu 1 289 -23 318 167 0 0 chr10 133060698 133060758 -7256007 + (CA)n Simple_repeat Simple_repeat 2 61 0 744 292 10 5 chr10 133061116 133061325 -7255440 + MIR SINE MIR 32 241 -21 509 255 59 80 chr10 133061417 133061656 -7255109 + MIR SINE MIR 12 245 -17 218 351 53 35 chr10 133062407 133062578 -7254187 - L2 LINE L2 -12 3260 3087 1505 125 0 17 chr10 133062826 133063066 -7253699 + AluSx SINE Alu 62 297 -15 440 236 126 16 chr10 133063246 133063428 -7253337 - L1ME4a LINE L1 -238 5883 5682 2149 105 0 0 chr10 133063438 133063745 -7253020 + AluSx SINE Alu 1 307 0 496 189 39 79 chr10 133063828 133063955 -7252810 + MER103 DNA DNA 2 123 -43 1610 154 4 8 chr10 133064125 133064372 -7252393 - AluJo SINE Alu -66 246 1 678 286 86 78 chr10 133064375 133064652 -7252113 + L1M4 LINE L1 3629 3902 -2244 2432 83 0 0 chr10 133064652 133064952 -7251813 + AluSx SINE Alu 1 300 -12 678 286 86 78 chr10 133064952 133065732 -7251033 + L1M4 LINE L1 3902 4695 -1451 287 281 74 60 chr10 133066027 133066110 -7250655 + L1 LINE L1 2131 2211 -3935 2038 91 42 14 chr10 133066110 133066397 -7250368 + AluY SINE Alu 1 295 -16 287 281 74 60 chr10 133066397 133066680 -7250085 + L1 LINE L1 2211 2502 -3644 22 0 0 0 chr10 133066686 133066708 -7250057 + AT_rich Low_complexity Low_complexity 1 22 0 377 319 102 33 chr10 133066721 133067082 -7249683 + L1 LINE L1 2569 2954 -3192 2947 200 5 0 chr10 133067090 133067666 -7249099 + L1 LINE L1 4795 5373 -773 1367 176 42 62 chr10 133067674 133067963 -7248802 + MLT1C LTR MaLR 185 467 0 597 251 140 29 chr10 133068193 133068472 -7248293 + LTR33 LTR ERVL 205 514 -7 806 311 75 9 chr10 133068482 133069113 -7247652 + L1MC4a LINE L1 4357 5028 -1118 787 277 178 13 chr10 133069650 133070033 -7246732 + L2 LINE L2 2868 3313 0 464 276 130 51 chr10 133070126 133070481 -7246284 + L1MC4a LINE L1 5545 5927 -1881 3232 223 192 41 chr10 133071438 133072543 -7244222 - L1MC4a LINE L1 -94 7714 6443 306 0 0 0 chr10 133072634 133072668 -7244097 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 10786 40 11 62 chr10 133072668 133074110 -7242655 - SVA Other Other -18 1368 1 28 0 0 0 chr10 133074992 133075020 -7241745 + AT_rich Low_complexity Low_complexity 1 28 0 2098 119 20 3 chr10 133075519 133075821 -7240944 - AluSx SINE Alu -5 307 1 22 0 0 0 chr10 133075821 133075843 -7240922 + AT_rich Low_complexity Low_complexity 1 22 0 202 225 50 75 chr10 133076373 133076453 -7240312 - MIR3 SINE MIR -41 167 90 1972 156 0 3 chr10 133079047 133079348 -7237417 + AluJb SINE Alu 1 300 -12 875 333 43 48 chr10 133079420 133079862 -7236903 - L2 LINE L2 -8 3264 2825 401 322 126 35 chr10 133080000 133080230 -7236535 - MIR SINE MIR 0 262 12 22 0 0 0 chr10 133080985 133081007 -7235758 + AT_rich Low_complexity Low_complexity 1 22 0 2468 133 28 19 chr10 133081117 133081478 -7235287 - THE1B LTR MaLR 0 364 1 2288 102 0 0 chr10 133081985 133082270 -7234495 - AluSx SINE Alu -27 285 1 2458 88 19 0 chr10 133085299 133085616 -7231149 - L1PA8A LINE L1 -4 6127 5805 13800 115 14 4 chr10 133086053 133088015 -7228750 - Tigger1 DNA MER2_type -435 1983 2 2261 84 0 48 chr10 133088755 133089065 -7227700 + AluSx SINE Alu 1 295 -17 25 31 0 0 chr10 133089065 133089097 -7227668 + AT_rich Low_complexity Low_complexity 1 32 0 460 86 0 0 chr10 133089389 133089459 -7227306 + Alu SINE Alu 238 307 -5 2069 118 20 3 chr10 133089471 133089768 -7226997 + AluSx SINE Alu 3 304 -8 221 205 0 0 chr10 133091410 133091449 -7225316 + L2 LINE L2 3217 3255 -17 1857 149 0 13 chr10 133091470 133091772 -7224993 + AluSx SINE Alu 1 298 -14 2491 113 48 20 chr10 133091921 133092275 -7224490 + THE1B LTR MaLR 1 364 0 324 286 9 0 chr10 133092705 133092810 -7223955 - MER103 DNA DNA -50 116 11 2360 128 5 16 chr10 133092909 133093277 -7223488 + L1PA15 LINE L1 5802 6165 0 327 202 0 0 chr10 133093920 133094009 -7222756 + CT-rich Low_complexity Low_complexity 1 89 0 1792 144 43 4 chr10 133094010 133094287 -7222478 - AluSx SINE Alu -24 288 1 226 289 164 39 chr10 133094817 133094921 -7221844 + MIR3 SINE MIR 39 155 -53 270 0 0 0 chr10 133099174 133099204 -7217561 + (TTA)n Simple_repeat Simple_repeat 2 31 0 181 336 64 27 chr10 133101219 133101329 -7215436 - L2 LINE L2 -18 3295 3182 386 173 86 0 chr10 133101403 133101484 -7215281 + MER53 DNA DNA 102 189 0 349 207 144 0 chr10 133101599 133101710 -7215055 - MIR SINE MIR -25 237 111 510 264 38 41 chr10 133102402 133102664 -7214101 - L1MC4a LINE L1 -211 5963 5694 415 350 70 10 chr10 133102854 133103340 -7213425 - L1MC4a LINE L1 -905 5241 4727 2072 125 67 12 chr10 133103490 133103818 -7212947 - MER47A DNA MER2_type 0 366 21 249 328 17 26 chr10 133104132 133104248 -7212517 - L1MC4a LINE L1 -2414 3732 3618 2336 99 3 10 chr10 133104554 133104866 -7211899 - AluSx SINE Alu -2 310 1 768 175 97 0 chr10 133104868 133105022 -7211743 - L1MC3 LINE L1 -11 7774 7606 922 201 90 16 chr10 133105030 133105360 -7211405 - MSTD LTR MaLR 0 365 1 2334 84 10 0 chr10 133105374 133105670 -7211095 - AluSg SINE Alu -11 299 1 2189 161 170 156 chr10 133105670 133106061 -7210704 - L1MC3 LINE L1 -194 7591 7207 259 310 0 26 chr10 133106061 133106177 -7210588 - MLT1F1 LTR MaLR -442 125 13 2189 161 170 156 chr10 133106177 133106583 -7210182 - L1MC3 LINE L1 -578 7207 6666 590 269 132 41 chr10 133107157 133107944 -7208821 - L1MC4a LINE L1 -2871 3275 2417 2015 138 27 0 chr10 133107962 133108259 -7208506 + AluSg SINE Alu 1 305 -5 390 360 74 15 chr10 133108440 133108765 -7208000 - L1 LINE L1 -1719 4427 4084 300 293 134 40 chr10 133109121 133109982 -7206783 - L1 LINE L1 -2752 3394 2453 27 0 0 0 chr10 133110595 133110622 -7206143 + AT_rich Low_complexity Low_complexity 1 27 0 509 308 133 37 chr10 133110700 133111401 -7205364 - HAL1b LINE L1 -570 778 11 1545 270 55 18 chr10 133112595 133113050 -7203715 - MER20B DNA MER1_type -309 474 3 288 250 38 0 chr10 133113120 133113200 -7203565 + MIR SINE MIR 179 261 -1 749 249 87 22 chr10 133114023 133114252 -7202513 + MSTA LTR MaLR 185 428 0 216 298 167 0 chr10 133114252 133114366 -7202399 + L2 LINE L2 3181 3313 0 536 236 18 36 chr10 133115035 133115200 -7201565 + MLT1K LTR MaLR 124 285 -303 477 231 8 26 chr10 133115787 133115904 -7200861 + LTR16C LTR ERVL 373 487 -4 193 207 69 0 chr10 133116644 133116702 -7200063 - MIR SINE MIR -65 143 82 1129 195 49 137 chr10 133117528 133117938 -7198827 - MLT1A2 LTR MaLR 0 374 1 1077 223 96 59 chr10 133118123 133118652 -7198113 + MLT1H LTR MaLR 1 549 0 254 239 43 34 chr10 133118660 133118777 -7197988 - L1ME4a LINE L1 -44 6077 5960 1041 201 91 97 chr10 133118802 133119185 -7197580 + MLT1B LTR MaLR 10 390 0 1093 201 125 36 chr10 133119646 133120251 -7196514 + MER39 LTR ERV1 6 542 0 542 294 5 16 chr10 133120447 133120634 -7196131 - L1ME4a LINE L1 -331 5790 5606 282 128 117 43 chr10 133120659 133120753 -7196012 - L1M4 LINE L1 -1668 4478 4378 1525 159 54 58 chr10 133120819 133121114 -7195651 + AluJb SINE Alu 11 304 -8 2358 131 102 3 chr10 133121126 133121509 -7195256 + MSTA LTR MaLR 2 422 -6 647 197 8 0 chr10 133121511 133121633 -7195132 + FLAM_A SINE Alu 2 124 -9 1844 126 43 20 chr10 133121808 133122110 -7194655 + AluSq SINE Alu 1 309 -4 1555 241 63 14 chr10 133122190 133122655 -7194110 - L1MC4a LINE L1 -591 5575 5392 2180 162 29 12 chr10 133122655 133122894 -7193871 - MSTB LTR MaLR 0 426 175 2123 97 0 4 chr10 133122894 133123213 -7193552 - AluSx SINE Alu 0 322 5 2180 162 29 12 chr10 133123213 133123391 -7193374 - MSTB LTR MaLR -251 175 1 1555 241 63 14 chr10 133123391 133123511 -7193254 - L1MC4a LINE L1 -774 5392 5279 727 303 52 58 chr10 133123541 133124007 -7192758 - L1M4 LINE L1 -1877 4269 3807 195 218 45 168 chr10 133124346 133124414 -7192351 + MIR SINE MIR 70 145 -117 1703 156 20 30 chr10 133124414 133124716 -7192049 - AluJb SINE Alu -13 299 1 195 218 45 168 chr10 133124716 133124867 -7191898 + MIR SINE MIR 145 262 0 180 135 0 0 chr10 133125130 133125167 -7191598 + (TA)n Simple_repeat Simple_repeat 2 38 0 323 290 126 41 chr10 133125340 133125562 -7191203 + MIR SINE MIR 20 261 -1 4055 218 31 10 chr10 133126778 133127596 -7189169 - MER21B LTR ERV1 -17 846 12 334 281 91 45 chr10 133127681 133127841 -7188924 + MIR SINE MIR 36 201 -61 1394 164 86 0 chr10 133127971 133128227 -7188538 + L1MB4 LINE L1 5892 6169 -11 639 305 94 53 chr10 133128869 133129713 -7187052 + L1M4 LINE L1 2839 3711 -2435 825 282 218 1 chr10 133129720 133130273 -7186492 + L2 LINE L2 2624 3312 -1 454 246 55 73 chr10 133130282 133130436 -7186329 + L1M4 LINE L1 3712 3862 -2284 1739 168 84 140 chr10 133130436 133130971 -7185794 + MLT1D LTR MaLR 1 505 0 454 246 55 73 chr10 133130971 133131036 -7185729 + L1M4 LINE L1 3862 3927 -2219 319 261 130 16 chr10 133131148 133131332 -7185433 + MIR SINE MIR 28 232 -30 3765 185 14 46 chr10 133131602 133132403 -7184362 - LTR39 LTR ERV1 0 783 9 21 0 0 0 chr10 133133422 133133443 -7183322 + AT_rich Low_complexity Low_complexity 1 21 0 194 179 0 26 chr10 133134107 133134146 -7182619 + MIR SINE MIR 109 146 -62 262 325 91 5 chr10 133135476 133135673 -7181092 - MIR SINE MIR -1 261 48 224 226 131 12 chr10 133136361 133136445 -7180320 + MIR SINE MIR 56 149 -59 284 0 28 0 chr10 133136883 133136919 -7179846 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1489 136 31 9 chr10 133138466 133138694 -7178071 + MER1A DNA MER1_type 27 259 -268 900 143 0 8 chr10 133138696 133138829 -7177936 + FLAM_C SINE Alu 3 134 -9 2284 103 0 0 chr10 133138832 133139122 -7177643 + AluSc SINE Alu 1 290 -19 2005 122 0 0 chr10 133139128 133139407 -7177358 + MER1A DNA MER1_type 251 529 0 2241 95 0 0 chr10 133139887 133140202 -7176563 - AluSx SINE Alu 0 315 1 472 340 14 7 chr10 133141948 133142092 -7174673 + L2 LINE L2 3128 3272 0 273 358 20 46 chr10 133142281 133142432 -7174333 - L2 LINE L2 -20 3252 3106 523 187 82 22 chr10 133142537 133142671 -7174094 + L1ME1 LINE L1 6020 6161 -5 697 247 76 36 chr10 133142692 133142915 -7173850 - MLT1G LTR MaLR -37 553 322 373 235 93 66 chr10 133142949 133143132 -7173633 - L2 LINE L2 -10 3303 3116 1779 89 52 120 chr10 133143144 133143468 -7173297 + AluSx SINE Alu 1 302 -10 1078 240 70 38 chr10 133143633 133144004 -7172761 + MLT1J1 LTR MaLR 1 383 -63 2740 170 28 8 chr10 133144168 133144678 -7172087 + MER41B LTR ERV1 100 482 -4 495 202 20 0 chr10 133144679 133144778 -7171987 + MER5A DNA MER1_type 6 106 -83 379 281 63 37 chr10 133144815 133145196 -7171569 - L1M4 LINE L1 -853 5293 4903 1061 270 86 50 chr10 133145299 133146037 -7170728 - L1ME4a LINE L1 -224 5897 5123 2206 131 7 0 chr10 133146360 133146666 -7170099 - AluSx SINE Alu 0 312 5 220 169 17 17 chr10 133146779 133146838 -7169927 + (TA)n Simple_repeat Simple_repeat 2 60 0 226 240 88 40 chr10 133147375 133147500 -7169265 + MIR3 SINE MIR 2 132 -76 279 0 0 0 chr10 133147528 133147559 -7169206 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 37722 34 0 1 chr10 133147559 133152893 -7163872 - L1PA3 LINE L1 -5 6150 692 2385 63 0 72 chr10 133153099 133153431 -7163334 + AluY SINE Alu 1 308 -3 2200 80 0 21 chr10 133153815 133154129 -7162636 - AluSg SINE Alu 0 308 1 276 158 0 0 chr10 133154138 133154195 -7162570 + (TA)n Simple_repeat Simple_repeat 1 57 0 869 267 128 36 chr10 133154223 133154717 -7162048 - L1ME4a LINE L1 -267 5854 5316 2879 205 29 44 chr10 133154888 133155760 -7161005 - L1MB2 LINE L1 0 6171 5356 2364 194 22 72 chr10 133155794 133156377 -7160388 - MLT2B3 LTR ERVL 0 554 1 3315 114 41 10 chr10 133156377 133156886 -7159879 - HERVL-B3 LTR ERVL 0 5654 5130 365 146 0 0 chr10 133156886 133156941 -7159824 - 5S rRNA rRNA -65 56 2 4520 101 25 0 chr10 133156942 133157546 -7159219 - HERVL-B3 LTR ERVL -517 5137 4519 898 153 0 84 chr10 133157546 133157736 -7159029 - MLT2A2 LTR ERVL -279 174 1 222 310 69 35 chr10 133159454 133159570 -7157195 + L2 LINE L2 3143 3262 -10 909 182 115 20 chr10 133160305 133160558 -7156207 + LTR16A LTR ERVL 174 450 0 185 288 153 42 chr10 133160768 133160983 -7155782 - L2 LINE L2 -6 3266 3028 381 307 33 13 chr10 133163169 133163319 -7153446 - MIR SINE MIR -31 231 79 641 284 101 52 chr10 133164472 133164946 -7151819 - MLT1F LTR MaLR 0 590 3 224 298 16 66 chr10 133165964 133166085 -7150680 - L2 LINE L2 -298 2974 2860 333 283 65 22 chr10 133166616 133166754 -7150011 + L2 LINE L2 3167 3310 -3 1926 148 21 3 chr10 133167121 133167411 -7149354 + AluSx SINE Alu 1 295 -17 488 303 72 5 chr10 133169552 133169736 -7147029 - MIR SINE MIR -25 237 44 1932 159 0 3 chr10 133170152 133170448 -7146317 - AluJb SINE Alu -17 295 1 2513 55 0 29 chr10 133170477 133170787 -7145978 - AluY SINE Alu -10 301 1 2374 218 18 25 chr10 133171050 133171293 -7145472 - L1MB1 LINE L1 -12 6156 5913 1822 168 0 23 chr10 133171293 133171597 -7145168 + AluJb SINE Alu 1 297 -15 2374 218 18 25 chr10 133171597 133171867 -7144898 - L1MB1 LINE L1 -255 5913 5647 293 224 160 45 chr10 133171887 133172043 -7144722 + MER5B DNA MER1_type 1 174 -4 209 229 29 14 chr10 133172626 133172696 -7144069 + GA-rich Low_complexity Low_complexity 2 72 0 815 153 42 7 chr10 133172714 133172858 -7143907 + MLT1D LTR MaLR 309 457 -48 1079 219 113 30 chr10 133176850 133177118 -7139647 - MER113 DNA MER1_type? -2 519 218 234 0 0 0 chr10 133177118 133177144 -7139621 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1079 219 113 30 chr10 133177144 133177204 -7139561 - MER113 DNA MER1_type? -303 218 164 1747 141 18 14 chr10 133177621 133177735 -7139030 + AluSx SINE Alu 23 135 -177 2238 101 3 13 chr10 133177735 133178041 -7138724 + AluY SINE Alu 1 303 -8 1747 141 18 14 chr10 133178041 133178231 -7138534 + AluSx SINE Alu 135 312 0 329 326 67 21 chr10 133178391 133178673 -7138092 + L1ME4a LINE L1 897 1191 -4928 527 122 61 0 chr10 133178826 133178908 -7137857 + L1MD2 LINE L1 6141 6227 -132 1779 204 142 68 chr10 133178908 133179489 -7137276 + MLT1E3 LTR MaLR 1 600 -24 2501 144 25 72 chr10 133179489 133179934 -7136831 + MSTC LTR MaLR 1 424 -4 1779 204 142 68 chr10 133179934 133179959 -7136806 + MLT1E3 LTR MaLR 600 622 -2 408 258 0 32 chr10 133179962 133180086 -7136679 + L1MD1 LINE L1 6109 6228 -14 479 259 91 75 chr10 133180098 133180320 -7136445 + L1ME4a LINE L1 2659 2876 -3253 1823 168 10 0 chr10 133180320 133180629 -7136136 + AluJb SINE Alu 1 312 0 479 259 91 75 chr10 133180629 133180870 -7135895 + L1ME4a LINE L1 2876 3129 -3000 356 337 17 0 chr10 133181287 133181468 -7135297 + L1ME4a LINE L1 3725 3908 -2221 824 149 22 15 chr10 133181625 133181759 -7135006 + L1MC2 LINE L1 6196 6330 -14 40659 68 11 4 chr10 133181818 133187923 -7128842 + L1PA5 LINE L1 5 6154 0 1431 165 111 25 chr10 133187986 133188265 -7128500 + AluJo SINE Alu 1 303 -9 346 273 41 110 chr10 133188267 133188729 -7128036 + L1ME4a LINE L1 4069 4498 -1631 419 309 105 47 chr10 133188867 133189436 -7127329 + L1ME4a LINE L1 5282 5880 -224 2076 108 20 7 chr10 133189436 133189731 -7127034 + AluSx SINE Alu 1 299 -13 2237 125 0 3 chr10 133190520 133190831 -7125934 - AluSx SINE Alu -2 310 1 314 286 23 23 chr10 133191480 133191613 -7125152 - LTR33 LTR ERVL -7 514 382 22 0 0 0 chr10 133192171 133192193 -7124572 + AT_rich Low_complexity Low_complexity 1 22 0 416 321 52 25 chr10 133192242 133192699 -7124066 + L1MDa LINE L1 2418 2887 -3653 505 373 53 18 chr10 133192735 133193172 -7123593 + L1MDa LINE L1 2959 3410 -3130 395 306 53 64 chr10 133193209 133193568 -7123197 + L1MDa LINE L1 3697 4051 -2489 411 287 120 0 chr10 133193948 133194098 -7122667 + MIR SINE MIR 87 254 -8 1511 190 31 37 chr10 133194190 133194402 -7122363 + MER33 DNA MER1_type 1 212 -2373 1833 166 0 3 chr10 133194402 133194698 -7122067 - AluJo SINE Alu -17 295 1 1511 190 31 37 chr10 133194698 133194811 -7121954 + MER33 DNA MER1_type 212 324 0 396 343 130 0 chr10 133194842 133195011 -7121754 - L3 LINE CR1 -126 1451 1261 189 327 93 9 chr10 133195652 133195759 -7121006 - MIR3 SINE MIR -5 203 88 685 243 144 20 chr10 133196861 133197153 -7119612 - LTR16A LTR ERVL -102 348 21 399 265 59 41 chr10 133197313 133197483 -7119282 + MIR SINE MIR 8 180 -82 2769 127 14 2 chr10 133197549 133197975 -7118790 - L1M1 LINE L1 -521 5782 5352 8829 142 29 11 chr10 133197981 133198710 -7118055 - L1MA3 LINE L1 0 7007 6293 2008 101 68 57 chr10 133198710 133199078 -7117687 + THE1C LTR MaLR 4 375 0 8829 142 29 11 chr10 133199078 133199350 -7117415 - L1MA3 LINE L1 -714 6293 6027 216 0 0 0 chr10 133199350 133199374 -7117391 + (TTG)n Simple_repeat Simple_repeat 2 25 0 8829 142 29 11 chr10 133199374 133200933 -7115832 - L1MA3 LINE L1 -980 6027 4392 3022 174 19 88 chr10 133202384 133203150 -7113615 - L1MA3 LINE L1 -2444 4404 3701 2392 81 0 32 chr10 133203150 133203285 -7113480 + AluSq SINE Alu 1 139 -174 2234 97 0 0 chr10 133203285 133203598 -7113167 + AluSc SINE Alu 2 314 0 2392 81 0 32 chr10 133203598 133203771 -7112994 + AluSq SINE Alu 139 300 -13 3022 174 19 88 chr10 133203771 133203858 -7112907 - L1MA3 LINE L1 -3147 3701 3610 7052 72 26 6 chr10 133203865 133205309 -7111456 - L1PA10 LINE L1 -1 6482 5015 19003 186 27 26 chr10 133205309 133207704 -7109061 - L1PA10 LINE L1 -1896 4565 2109 2098 129 10 0 chr10 133207704 133208007 -7108758 + AluSq SINE Alu 1 306 -7 19003 186 27 26 chr10 133208007 133210108 -7106657 - L1PA10 LINE L1 -4352 2109 10 12571 209 21 41 chr10 133210120 133211952 -7104813 - L1MA3 LINE L1 -3226 3622 1898 2249 125 0 0 chr10 133211952 133212255 -7104510 - AluSx SINE Alu -9 303 1 12571 209 21 41 chr10 133212255 133214117 -7102648 - L1MA3 LINE L1 -4950 1898 1 243 283 66 28 chr10 133214263 133214369 -7102396 - L1MC4a LINE L1 -1886 5922 5813 420 222 118 142 chr10 133215241 133215664 -7101101 + MLT1J LTR MaLR 99 511 0 379 327 38 6 chr10 133216036 133216195 -7100570 - MIR SINE MIR -11 251 88 808 226 19 24 chr10 133216760 133216968 -7099797 - L2 LINE L2 -9 3304 3098 524 288 119 0 chr10 133216972 133217149 -7099616 - MIR SINE MIR -15 247 50 734 268 90 113 chr10 133218757 133219279 -7097486 - MLT1J LTR MaLR 0 511 2 290 283 42 115 chr10 133219569 133219691 -7097074 + LTR33 LTR ERVL 1 106 -415 2341 94 0 16 chr10 133219691 133220009 -7096756 - AluSq SINE Alu 0 313 1 290 283 42 115 chr10 133220009 133220077 -7096688 + LTR33 LTR ERVL 106 177 -344 821 176 63 19 chr10 133220081 133220240 -7096525 + MER63A DNA MER1_type 1 166 -44 850 261 65 4 chr10 133220276 133220537 -7096228 + LTR33 LTR ERVL 198 474 -47 345 326 14 7 chr10 133220567 133220708 -7096057 - MIR SINE MIR -97 165 24 2189 114 0 31 chr10 133222506 133222823 -7093942 - AluSq SINE Alu -4 309 3 196 321 55 64 chr10 133223077 133223186 -7093579 - L2 LINE L2 -65 3207 3100 2223 106 3 0 chr10 133223345 133223638 -7093127 + AluSc SINE Alu 1 294 -15 663 151 171 20 chr10 133224948 133225100 -7091665 + MER5A DNA MER1_type 9 183 -6 252 0 0 0 chr10 133227047 133227075 -7089690 + (CA)n Simple_repeat Simple_repeat 2 29 0 487 257 25 40 chr10 133228028 133228203 -7088562 + L1ME LINE L1 5572 5743 -378 404 149 11 46 chr10 133228204 133228274 -7088491 - MER44D DNA MER2_type -1 608 542 323 266 13 0 chr10 133228274 133228353 -7088412 + Tigger5 DNA MER2_type 1 80 -2243 405 206 0 0 chr10 133228374 133228447 -7088318 + Tigger5 DNA MER2_type 2251 2323 0 918 149 120 19 chr10 133228471 133228679 -7088086 - MER44D DNA MER2_type -80 529 31 366 277 126 34 chr10 133229877 133230083 -7086682 + MLT1K LTR MaLR 168 392 -196 2120 119 21 0 chr10 133231350 133231636 -7085129 + AluSx SINE Alu 1 292 -20 740 122 40 7 chr10 133231638 133231786 -7084979 + GA-rich Low_complexity Low_complexity 4 156 0 1176 109 12 12 chr10 133231786 133232040 -7084725 + (GAAA)n Simple_repeat Simple_repeat 3 255 0 494 283 10 3 chr10 133232080 133232218 -7084547 + MIR SINE MIR 3 140 -68 2768 166 25 0 chr10 133233646 133234127 -7082638 + L1MB3 LINE L1 5655 6147 -36 334 271 29 43 chr10 133234307 133234447 -7082318 - MIR SINE MIR -10 252 115 244 235 136 0 chr10 133234551 133234632 -7082133 - L1MC/D LINE L1 -2091 5717 5626 190 213 48 135 chr10 133236198 133236275 -7080490 + L2 LINE L2 2199 2281 -1033 2316 90 3 0 chr10 133236275 133236564 -7080201 - AluSx SINE Alu -22 290 1 190 213 48 135 chr10 133236564 133236716 -7080049 + L2 LINE L2 2281 2408 -906 1816 140 103 31 chr10 133236727 133237077 -7079688 + THE1C LTR MaLR 1 375 0 2266 94 127 57 chr10 133237240 133237455 -7079310 + L1PA14 LINE L1 5730 5929 -232 2342 81 0 3 chr10 133237455 133237750 -7079015 + AluY SINE Alu 1 294 -17 2266 94 127 57 chr10 133237750 133237937 -7078828 + L1PA14 LINE L1 5929 6160 -1 184 265 20 0 chr10 133238450 133238499 -7078266 + L2 LINE L2 3188 3237 -35 263 220 53 106 chr10 133238517 133238649 -7078116 + MER115 DNA AcHobo 11 135 -558 644 219 7 14 chr10 133238787 133238933 -7077832 + MER115 DNA AcHobo 538 682 -11 2604 40 3 3 chr10 133239068 133239364 -7077401 + AluY SINE Alu 1 296 -15 225 191 11 90 chr10 133240785 133240874 -7075891 + L1MC5 LINE L1 7831 7912 -49 1504 161 243 50 chr10 133242905 133243321 -7073444 + LTR48 LTR ERV1 1 496 -291 1047 172 29 15 chr10 133243340 133243544 -7073221 + LTR48B LTR ERV1 438 644 0 415 168 126 76 chr10 133243748 133243867 -7072898 + FLAM_A SINE Alu 11 135 -7 240 165 175 21 chr10 133243867 133243964 -7072801 - Charlie7 DNA MER1_type -47 2565 2454 947 284 24 15 chr10 133243993 133244328 -7072437 - Charlie7 DNA MER1_type -255 2357 2020 1998 182 80 44 chr10 133244737 133244941 -7071824 - Charlie7 DNA MER1_type -614 1998 1803 2580 65 0 3 chr10 133244941 133245247 -7071518 + AluSq SINE Alu 1 305 -8 1998 182 80 44 chr10 133245247 133245507 -7071258 - Charlie7 DNA MER1_type -809 1803 1508 2460 170 36 11 chr10 133245507 133245953 -7070812 + MSTB2 LTR MaLR 1 457 0 1998 182 80 44 chr10 133245953 133246037 -7070728 - Charlie7 DNA MER1_type -1104 1508 1429 626 272 60 67 chr10 133246110 133246297 -7070468 + MLT1I LTR MaLR 76 252 -157 450 164 48 10 chr10 133246304 133246408 -7070357 + MER53 DNA DNA 82 189 0 239 254 16 16 chr10 133246409 133246472 -7070293 + MLT1I LTR MaLR 341 403 -6 440 207 129 0 chr10 133246485 133246601 -7070164 - Charlie7 DNA MER1_type -2438 174 44 259 338 83 25 chr10 133246617 133246774 -7069991 + MER5A DNA MER1_type 12 177 -12 370 297 95 34 chr10 133246821 133246969 -7069796 + MIR3 SINE MIR 42 198 -10 21 36 0 0 chr10 133248825 133248853 -7067912 + AT_rich Low_complexity Low_complexity 1 28 0 12973 29 5 1 chr10 133248853 133251136 -7065629 - L1PA3 LINE L1 -3 6152 3866 6039 38 1 0 chr10 133251136 133251866 -7064899 + L1PA3 LINE L1 3126 3856 -2290 305 293 65 51 chr10 133251945 133251972 -7064793 - L1ME4a LINE L1 -197 5924 5899 2308 78 0 14 chr10 133251972 133252268 -7064497 - AluY SINE Alu -19 292 1 305 293 65 51 chr10 133252268 133252455 -7064310 - L1ME4a LINE L1 -222 5899 5707 2174 98 7 0 chr10 133252599 133252886 -7063879 - AluSx SINE Alu -23 289 1 195 215 43 65 chr10 133253230 133253323 -7063442 + MER5A DNA MER1_type 34 124 -65 2304 99 0 3 chr10 133254801 133255104 -7061661 + AluSx SINE Alu 1 302 -10 237 314 53 37 chr10 133256343 133256531 -7060234 + L1ME LINE L1 5636 5826 -295 424 267 87 7 chr10 133256540 133256690 -7060075 - MIR SINE MIR -37 225 64 754 169 125 0 chr10 133257108 133257268 -7059497 - MER104 DNA MER2_type 0 180 1 1575 137 174 10 chr10 133258605 133258904 -7057861 + MER7A DNA MER2_type 1 346 0 200 224 86 0 chr10 133259022 133259080 -7057685 - MER5C DNA MER1_type -217 107 45 199 345 97 9 chr10 133259216 133259329 -7057436 - L2 LINE L2 -54 3218 3096 209 278 79 48 chr10 133261337 133261473 -7055292 - MIR SINE MIR -66 142 1 2134 102 34 17 chr10 133262188 133262481 -7054284 + AluSx SINE Alu 1 298 -14 240 286 0 13 chr10 133262513 133262590 -7054175 + MER103 DNA DNA 2 77 -89 695 225 0 0 chr10 133262800 133262929 -7053836 - FLAM_A SINE Alu -4 129 1 514 138 12 0 chr10 133263823 133263903 -7052862 + AluSg/x SINE Alu 208 288 -21 1681 189 0 13 chr10 133265134 133265435 -7051330 + AluJo SINE Alu 1 297 -15 222 268 73 24 chr10 133265597 133265679 -7051086 - L2 LINE L2 -190 3082 2997 572 307 76 4 chr10 133266051 133266289 -7050476 - MIR SINE MIR 0 262 8 329 278 117 19 chr10 133266295 133266457 -7050308 - MER5B DNA MER1_type 0 178 1 213 256 150 15 chr10 133266554 133266687 -7050078 - L2 LINE L2 -833 2481 2331 1073 173 195 4 chr10 133268553 133268825 -7047940 + MER33 DNA MER1_type 1 324 0 466 310 266 13 chr10 133270926 133271313 -7045452 + L2 LINE L2 2826 3310 -3 259 261 92 15 chr10 133271632 133271762 -7045003 + MIR SINE MIR 34 173 -89 614 229 159 19 chr10 133272999 133273213 -7043552 + MIR SINE MIR 19 262 0 1346 94 0 3 chr10 133275590 133275813 -7040952 - AluSp SINE Alu -12 301 2 1954 160 3 3 chr10 133275955 133276267 -7040498 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 133277143 133277166 -7039599 + AT_rich Low_complexity Low_complexity 1 23 0 1512 154 139 8 chr10 133278490 133278757 -7038008 - AluJo SINE Alu 0 302 1 2090 155 115 3 chr10 133279066 133279439 -7037326 - MER44D DNA MER2_type 0 605 136 1691 202 31 14 chr10 133279439 133279795 -7036970 - MLT1B LTR MaLR 0 390 29 416 277 109 76 chr10 133280453 133280846 -7035919 + L1 LINE L1 4993 5398 -748 1457 154 0 37 chr10 133280853 133281099 -7035666 - AluSg/x SINE Alu -10 302 66 444 299 79 29 chr10 133282512 133282753 -7034012 - L1ME3A LINE L1 -273 5897 5645 698 125 0 0 chr10 133282976 133283072 -7033693 - AluSg/x SINE Alu -12 300 205 495 167 36 0 chr10 133283078 133283162 -7033603 - L1M4 LINE L1 -1196 4950 4864 1758 147 21 7 chr10 133283257 133283543 -7033222 + AluSx SINE Alu 15 304 -8 341 230 84 79 chr10 133284069 133284132 -7032633 + HAL1b LINE L1 587 648 -700 2237 123 0 0 chr10 133284132 133284440 -7032325 + AluSx SINE Alu 1 308 -4 341 230 84 79 chr10 133284440 133284554 -7032211 + HAL1b LINE L1 648 765 -583 278 129 140 194 chr10 133284657 133284843 -7031922 + HAL1b LINE L1 933 1108 -240 1229 153 94 47 chr10 133285200 133285484 -7031281 - AluJo SINE Alu 0 312 29 2147 218 47 52 chr10 133285906 133286518 -7030247 - MER77 LTR ERV1 -2 603 60 219 291 102 0 chr10 133286695 133286801 -7029964 - MIR SINE MIR -66 142 30 273 243 0 27 chr10 133287240 133287314 -7029451 + (TATG)n Simple_repeat Simple_repeat 3 74 0 2085 135 3 3 chr10 133288207 133288519 -7028246 + AluSx SINE Alu 1 312 0 609 254 24 24 chr10 133289181 133289350 -7027415 - L1ME1 LINE L1 -21 6145 5977 5165 236 69 16 chr10 133289353 133290970 -7025795 - L1MCb LINE L1 -2073 4868 3167 1603 237 143 31 chr10 133291007 133291096 -7025669 - L1MCb LINE L1 -4025 3097 3019 1855 149 7 7 chr10 133291096 133291385 -7025380 - AluJo SINE Alu -23 289 1 1603 237 143 31 chr10 133291385 133292091 -7024674 - L1MCb LINE L1 -4103 3019 2213 1861 254 45 29 chr10 133292197 133293171 -7023594 - L1MCb LINE L1 -4892 1531 820 328 281 116 21 chr10 133293397 133293691 -7023074 - L1MCb LINE L1 -5854 568 86 848 195 0 7 chr10 133293765 133293919 -7022846 + FRAM SINE Alu 12 164 -12 2632 62 0 0 chr10 133293974 133294282 -7022483 - AluY SINE Alu -3 308 1 1248 195 4 1 chr10 133295024 133295323 -7021442 - MER2 DNA MER2_type 0 345 6 260 288 6 75 chr10 133296567 133296727 -7020038 + MIR SINE MIR 86 234 -28 335 229 153 42 chr10 133297242 133297360 -7019405 + L2 LINE L2 3183 3313 0 2084 128 7 3 chr10 133298980 133299277 -7017488 - AluJb SINE Alu -14 298 1 1779 133 13 42 chr10 133301404 133301712 -7015053 - AluJb SINE Alu -13 299 1 331 243 59 29 chr10 133302483 133302619 -7014146 - MIR3 SINE MIR -39 169 30 1669 153 41 37 chr10 133304136 133304431 -7012334 + AluJb SINE Alu 1 296 -16 182 240 40 0 chr10 133304452 133304502 -7012263 - L2 LINE L2 -98 3215 3164 1777 141 26 56 chr10 133305010 133305316 -7011449 + AluJb SINE Alu 1 297 -15 278 280 8 48 chr10 133305348 133305473 -7011292 - MER94 DNA DNA -14 120 1 2344 98 3 0 chr10 133305678 133305974 -7010791 - AluSx SINE Alu -15 297 1 209 186 31 72 chr10 133308336 133308433 -7008332 + G-rich Low_complexity Low_complexity 6 98 0 330 190 14 28 chr10 133308713 133308855 -7007910 + (CAGAGA)n Simple_repeat Simple_repeat 2 141 0 643 210 28 21 chr10 133311117 133311260 -7005505 + AluJo SINE Alu 2 145 -167 1729 164 0 63 chr10 133311261 133311578 -7005187 + AluJb SINE Alu 1 297 -15 400 266 96 5 chr10 133311578 133311832 -7004933 + MLT1J2 LTR MaLR 131 450 0 452 280 90 59 chr10 133312992 133313047 -7003718 - L2 LINE L2 -48 3265 3213 3230 62 76 0 chr10 133313047 133313466 -7003299 - MLT2A2 LTR ERVL -2 451 1 452 280 90 59 chr10 133313466 133313853 -7002912 - L2 LINE L2 -100 3213 2809 1325 203 100 26 chr10 133314361 133314701 -7002064 + MLT1A1 LTR MaLR 1 365 0 1997 148 0 13 chr10 133315216 133315520 -7001245 - AluJb SINE Alu -12 300 1 1728 216 55 53 chr10 133316195 133316696 -7000069 + MLT2B3 LTR ERVL 4 508 -46 225 83 0 0 chr10 133316696 133316732 -7000033 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 1728 216 55 53 chr10 133316732 133316780 -6999985 + MLT2B3 LTR ERVL 508 554 0 308 289 39 10 chr10 133318035 133318139 -6998626 + MIR SINE MIR 86 192 -70 648 73 0 0 chr10 133318180 133318262 -6998503 + MER57A LTR ERV1 8 89 -314 193 298 18 18 chr10 133318737 133318794 -6997971 - L3 LINE CR1 -8 1569 1513 * 400 298 23 8 chr10 133318784 133318915 -6997850 + CT-rich Low_complexity Low_complexity 3 135 0 403 257 59 0 chr10 133318916 133319017 -6997748 - MIR SINE MIR -60 148 42 21 0 0 0 chr10 133319466 133319487 -6997278 + AT_rich Low_complexity Low_complexity 1 21 0 2175 173 22 61 chr10 133319520 133319562 -6997203 + MSTA LTR MaLR 1 43 -385 565 43 0 0 chr10 133319562 133319632 -6997133 + L1PA2 LINE L1 6081 6150 -5 2175 173 22 61 chr10 133319632 133320033 -6996732 + MSTA LTR MaLR 43 427 -1 329 267 82 37 chr10 133321235 133321370 -6995395 - MIR SINE MIR -107 155 15 243 276 0 13 chr10 133322120 133322196 -6994569 + MLT1F1 LTR MaLR 45 119 -448 871 264 81 3 chr10 133322267 133322562 -6994203 + MER90 LTR ERV1 1 318 -257 22 0 0 0 chr10 133322657 133322679 -6994086 + AT_rich Low_complexity Low_complexity 1 22 0 1574 193 7 0 chr10 133323048 133323338 -6993427 + MER90 LTR ERV1 323 614 0 1768 170 16 19 chr10 133323355 133323678 -6993087 + L1MC3 LINE L1 7294 7615 -170 225 265 108 66 chr10 133323686 133323852 -6992913 - MLT1K LTR MaLR -113 475 303 239 256 70 108 chr10 133323889 133324018 -6992747 - MLT1K LTR MaLR -408 180 57 533 244 0 32 chr10 133325976 133326099 -6990666 - L2 LINE L2 0 3272 3154 273 57 0 0 chr10 133326294 133326329 -6990436 + (TC)n Simple_repeat Simple_repeat 1 35 0 1344 167 14 0 chr10 133326708 133326923 -6989842 + MER20 DNA MER1_type 2 219 0 247 269 30 47 chr10 133328334 133328504 -6988261 + L1M4b LINE L1 44 459 -6396 1281 219 22 60 chr10 133328514 133328916 -6987849 + L1ME1 LINE L1 5775 6161 -5 288 241 51 13 chr10 133329905 133329984 -6986781 + MIR SINE MIR 20 101 -161 2324 92 20 0 chr10 133330028 133330373 -6986392 + AluSp SINE Alu 2 352 0 345 270 10 30 chr10 133330393 133330493 -6986272 + MIR SINE MIR 162 259 -3 197 219 0 0 chr10 133330551 133330592 -6986173 + MIR SINE MIR 113 153 -109 229 250 26 13 chr10 133330793 133330869 -6985896 - L2 LINE L2 -9 3263 3187 327 305 35 46 chr10 133331226 133331423 -6985342 - L1M4 LINE L1 -3372 2774 2580 417 260 132 9 chr10 133331763 133331949 -6984816 + MIR SINE MIR 5 211 -49 185 257 152 38 chr10 133332012 133332117 -6984648 + L2 LINE L2 3142 3258 -14 515 141 0 0 chr10 133332919 133333029 -6983736 - AluSg/x SINE Alu 0 322 213 2092 144 0 3 chr10 133333403 133333716 -6983049 - AluSx SINE Alu 0 312 1 496 236 25 32 chr10 133334279 133334436 -6982329 + MIR SINE MIR 31 186 -76 25 0 0 0 chr10 133334482 133334507 -6982258 + AT_rich Low_complexity Low_complexity 1 25 0 2319 87 0 7 chr10 133334614 133334912 -6981853 + AluY SINE Alu 1 296 -15 45 19 0 0 chr10 133335249 133335301 -6981464 + AT_rich Low_complexity Low_complexity 1 52 0 694 196 14 27 chr10 133335486 133335634 -6981131 - FRAM SINE Alu -9 167 22 699 242 57 43 chr10 133336360 133336571 -6980194 + MIR SINE MIR 43 256 -6 2630 189 54 32 chr10 133336615 133337018 -6979747 - MER68 LTR ERV1 0 562 143 2136 60 8 0 chr10 133337018 133337284 -6979481 - AluY SINE Alu -24 287 20 2630 189 54 32 chr10 133337284 133337413 -6979352 - MER68 LTR ERV1 -419 143 18 2312 74 10 0 chr10 133337467 133337763 -6979002 + AluY SINE Alu 1 299 -12 1691 163 21 11 chr10 133337952 133338235 -6978530 - AluJb SINE Alu -26 286 1 815 199 196 13 chr10 133338235 133338551 -6978214 + LTR37A LTR ERV1 53 426 0 196 264 11 55 chr10 133338581 133338672 -6978093 + MER5A DNA MER1_type 4 90 -99 219 290 97 69 chr10 133339316 133339461 -6977304 - L2 LINE L2 0 3272 3124 2041 114 10 10 chr10 133340835 133341124 -6975641 + AluSq SINE Alu 1 289 -24 387 0 0 0 chr10 133341682 133341725 -6975040 + (CA)n Simple_repeat Simple_repeat 1 43 0 254 125 83 0 chr10 133341913 133341961 -6974804 + MER117 DNA MER1_type 10 61 -136 728 271 117 12 chr10 133342438 133342685 -6974080 + L1MC4 LINE L1 5453 5725 -2083 1618 228 120 13 chr10 133342697 133343118 -6973647 - MLT1D LTR MaLR -6 499 26 2283 98 0 10 chr10 133343118 133343415 -6973350 - AluY SINE Alu -17 294 1 1618 228 120 13 chr10 133343415 133343444 -6973321 - MLT1D LTR MaLR -479 26 1 990 199 9 37 chr10 133343572 133343788 -6972977 + LTR37A-int LTR ERV1 148 357 -6848 607 246 68 42 chr10 133344107 133344140 -6972625 - MIR SINE MIR -14 248 217 2655 154 87 32 chr10 133344140 133344633 -6972132 - MLT2B1 LTR ERVL 0 520 1 607 246 68 42 chr10 133344633 133344835 -6971930 - MIR SINE MIR -45 217 7 250 263 128 23 chr10 133345042 133345085 -6971680 - L1ME4a LINE L1 -12 6109 6072 3262 143 62 10 chr10 133345085 133345666 -6971099 + L1MB3 LINE L1 5572 6182 -1 250 263 128 23 chr10 133345666 133345755 -6971010 - L1ME4a LINE L1 -49 6072 5963 2431 88 3 0 chr10 133346630 133346937 -6969828 - AluSp SINE Alu -5 308 1 5062 201 77 72 chr10 133349335 133349718 -6967047 + L1MC4 LINE L1 6412 6792 -1250 1973 150 17 0 chr10 133349718 133350005 -6966760 + AluJb SINE Alu 1 292 -20 5062 201 77 72 chr10 133350005 133350468 -6966297 + L1MC4 LINE L1 6792 7251 -791 3704 151 69 44 chr10 133350468 133351177 -6965588 + LTR8A LTR ERV1 1 727 0 5062 201 77 72 chr10 133351177 133351977 -6964788 + L1MC4 LINE L1 7251 8042 0 1801 166 3 7 chr10 133352180 133352469 -6964296 + AluSx SINE Alu 1 288 -24 278 271 0 0 chr10 133352581 133352640 -6964125 + MIR SINE MIR 93 151 -57 1006 157 46 93 chr10 133352886 133353102 -6963663 + AluJo SINE Alu 92 297 -15 262 303 0 0 chr10 133353977 133354053 -6962712 + MER94 DNA DNA 59 134 0 667 318 37 0 chr10 133354070 133354284 -6962481 + MIR SINE MIR 20 241 -21 200 192 236 38 chr10 133354599 133354703 -6962062 + MIR SINE MIR 78 147 -61 3539 95 95 6 chr10 133355053 133355537 -6961228 + MER1A DNA MER1_type 1 527 0 242 250 17 0 chr10 133355688 133355748 -6961017 - MLT1K LTR MaLR -13 575 515 334 197 16 0 chr10 133356118 133356179 -6960586 + Charlie3 DNA MER1_type 1 62 -2648 1070 273 112 42 chr10 133359780 133360252 -6956513 + L2 LINE L2 2313 2817 -497 315 274 19 33 chr10 133360206 133360326 -6956439 - L2 LINE L2 -353 2919 2803 * 516 286 211 43 chr10 133361277 133361651 -6955114 + L2 LINE L2 2874 3310 -3 1764 188 14 0 chr10 133362107 133362400 -6954365 + AluJo SINE Alu 1 297 -15 1643 170 21 7 chr10 133363094 133363382 -6953383 + AluJo SINE Alu 18 309 -3 604 314 211 17 chr10 133363422 133364020 -6952745 - L2 LINE L2 -665 2649 1936 1298 250 96 10 chr10 133364064 133364575 -6952190 - MLT1G1 LTR MaLR -7 588 1 281 342 70 0 chr10 133364577 133364691 -6952074 + MIR SINE MIR 107 228 -34 318 298 58 39 chr10 133364792 133364997 -6951768 + L2 LINE L2 1729 1937 -1377 22 70 0 0 chr10 133365906 133365949 -6950816 + AT_rich Low_complexity Low_complexity 1 43 0 886 143 15 15 chr10 133367592 133367725 -6949040 - FLAM_C SINE Alu 0 133 1 931 214 0 0 chr10 133368035 133368194 -6948571 + FAM SINE Alu 1 159 -16 283 167 20 0 chr10 133368219 133368275 -6948490 + Alu SINE Alu 1 50 -252 627 219 0 8 chr10 133368385 133368513 -6948252 - FLAM_C SINE Alu -6 127 1 449 313 60 7 chr10 133369084 133369234 -6947531 - MIR3 SINE MIR -15 193 36 2377 109 0 6 chr10 133369347 133369659 -6947106 + AluSx SINE Alu 1 310 -2 245 275 29 0 chr10 133370563 133370632 -6946133 + L2 LINE L2 3178 3248 -24 260 329 0 0 chr10 133370793 133370875 -6945890 - MIR SINE MIR -68 140 59 2118 106 0 27 chr10 133371028 133371353 -6945412 + AluSq SINE Alu 1 317 0 2571 48 0 3 chr10 133371358 133371653 -6945112 + AluY SINE Alu 1 294 -17 2468 84 3 0 chr10 133371806 133372115 -6944650 + AluY SINE Alu 1 310 -1 1612 142 11 11 chr10 133373574 133373841 -6942924 - AluJo SINE Alu -12 300 34 380 288 142 9 chr10 133373846 133374079 -6942686 + L2 LINE L2 2683 2946 -368 187 240 170 50 chr10 133374825 133374925 -6941840 - MIR SINE MIR -27 235 124 1562 261 45 19 chr10 133378120 133378648 -6938117 + L1MEc LINE L1 49 590 -5806 724 237 93 0 chr10 133378720 133378914 -6937851 + L1MEc LINE L1 716 927 -5469 1439 107 16 0 chr10 133379219 133379406 -6937359 - AluSx SINE Alu -121 191 2 1090 155 91 0 chr10 133380344 133380531 -6936234 + MER34C LTR ERV1 1 204 -381 1158 158 0 0 chr10 133380531 133380702 -6936063 + AluJb SINE Alu 142 312 0 21 71 0 0 chr10 133382159 133382201 -6934564 + AT_rich Low_complexity Low_complexity 1 42 0 2395 91 7 7 chr10 133383695 133384004 -6932761 + AluSc SINE Alu 1 309 0 2508 66 0 7 chr10 133384200 133384501 -6932264 - AluY SINE Alu -12 299 1 239 108 27 0 chr10 133384627 133384664 -6932101 - tRNA-Phe-TTC tRNA tRNA -38 38 1 1054 153 0 55 chr10 133385415 133385598 -6931167 + AluJo SINE Alu 1 173 -139 2052 115 3 31 chr10 133386617 133386938 -6929827 - AluJo SINE Alu 0 312 1 246 95 0 0 chr10 133387758 133387800 -6928965 + (T)n Simple_repeat Simple_repeat 1 42 0 1152 214 20 10 chr10 133389490 133389785 -6926980 - AluY SINE Alu 0 301 4 2173 199 121 32 chr10 133390246 133390783 -6925982 + MER34C LTR ERV1 1 585 0 2184 112 0 14 chr10 133390791 133391120 -6925645 - AluSg SINE Alu 0 310 1 2151 146 0 0 chr10 133391128 133391436 -6925329 - AluJo SINE Alu -4 308 1 914 215 130 68 chr10 133391465 133391759 -6925006 + MER93b LTR ERV1 12 331 -42 1774 167 27 10 chr10 133391759 133392052 -6924713 - AluJb SINE Alu -11 301 4 914 215 130 68 chr10 133392052 133392096 -6924669 + MER93b LTR ERV1 331 371 -2 24 0 0 0 chr10 133393752 133393776 -6922989 + AT_rich Low_complexity Low_complexity 1 24 0 1879 137 14 4 chr10 133393776 133394054 -6922711 - AluJb SINE Alu -31 281 1 184 280 0 67 chr10 133394549 133394624 -6922141 - L2 LINE L2 -2 3270 3201 21 36 0 0 chr10 133394976 133395004 -6921761 + AT_rich Low_complexity Low_complexity 1 28 0 798 248 209 30 chr10 133395365 133395833 -6920932 + MLT1H1 LTR MaLR 1 552 -3 2077 261 68 34 chr10 133396990 133397366 -6919399 + L2 LINE L2 2120 2482 -831 2173 194 57 26 chr10 133397366 133397856 -6918909 + MLT1D LTR MaLR 1 505 0 2077 261 68 34 chr10 133397856 133398553 -6918212 + L2 LINE L2 2482 3227 -86 185 295 77 0 chr10 133399320 133399398 -6917367 - L2 LINE L2 0 3272 3189 206 375 9 0 chr10 133399490 133399602 -6917163 - L2 LINE L2 -420 2894 2782 634 153 38 69 chr10 133399751 133399882 -6916883 - FLAM_A SINE Alu -4 129 3 1490 118 5 23 chr10 133400314 133400535 -6916230 - AluJo SINE Alu -11 301 85 21 36 0 0 chr10 133400580 133400608 -6916157 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 133400726 133400754 -6916011 + AT_rich Low_complexity Low_complexity 1 28 0 2135 128 3 0 chr10 133400889 133401178 -6915587 + AluSx SINE Alu 1 290 -22 425 315 27 36 chr10 133401869 133402088 -6914677 - MIR SINE MIR -6 256 40 423 100 0 0 chr10 133402730 133402790 -6913975 - U2 snRNA snRNA -128 60 1 765 130 8 16 chr10 133402905 133403028 -6913737 + FLAM_C SINE Alu 6 127 -16 733 125 71 0 chr10 133403572 133403684 -6913081 + FLAM_C SINE Alu 4 123 -10 25 51 0 0 chr10 133403688 133403727 -6913038 + AT_rich Low_complexity Low_complexity 1 39 0 246 339 165 25 chr10 133403902 133404618 -6912147 + L2 LINE L2 2041 2856 -458 189 0 0 0 chr10 133405332 133405353 -6911412 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2551 53 0 0 chr10 133405355 133405654 -6911111 - AluY SINE Alu -12 299 1 30 89 0 0 chr10 133408244 133408323 -6908442 + GC_rich Low_complexity Low_complexity 1 79 0 217 229 0 0 chr10 133408773 133408821 -6907944 + (CTGGGG)n Simple_repeat Simple_repeat 5 52 0 815 207 94 15 chr10 133409679 133409882 -6906883 - MER50-int LTR ERV1 -6982 223 5 1033 160 46 36 chr10 133409891 133410027 -6906738 - MER50 LTR ERV1 -28 706 566 2268 97 3 3 chr10 133410027 133410325 -6906440 + AluSc SINE Alu 1 298 -11 1033 160 46 36 chr10 133410325 133410407 -6906358 - MER50 LTR ERV1 -168 566 486 1706 161 3 38 chr10 133410791 133411108 -6905657 - AluJo SINE Alu 0 307 1 602 225 216 14 chr10 133411474 133411692 -6905073 + MIR SINE MIR 1 262 0 259 333 0 13 chr10 133411765 133411843 -6904922 - MIR SINE MIR -114 94 18 961 128 0 0 chr10 133411943 133412076 -6904689 + FLAM_C SINE Alu 1 133 0 365 266 79 0 chr10 133412161 133412300 -6904465 - L1ME LINE L1 -406 5715 5566 267 245 167 10 chr10 133413471 133413573 -6903192 - MIR SINE MIR -98 164 47 291 299 15 36 chr10 133413926 133414063 -6902702 + L2 LINE L2 3138 3271 -1 1668 164 0 59 chr10 133415354 133415526 -6901239 - AluJo SINE Alu -7 305 159 2304 101 3 0 chr10 133415526 133415824 -6900941 - AluSp SINE Alu -14 299 1 1668 164 0 59 chr10 133415824 133415975 -6900790 - AluJo SINE Alu -153 159 1 2157 112 7 0 chr10 133417082 133417414 -6899351 - AluSx SINE Alu 0 312 1 556 200 0 17 chr10 133417428 133417548 -6899217 - FLAM_A SINE Alu -1 141 24 517 259 272 32 chr10 133417645 133418226 -6898539 + L2 LINE L2 2366 3084 -188 2008 100 7 4 chr10 133418303 133418573 -6898192 + AluSx SINE Alu 1 271 -41 1357 55 0 0 chr10 133418573 133418736 -6898029 + L1PA3 LINE L1 5990 6152 -3 554 171 0 0 chr10 133420043 133420131 -6896634 + FLAM_A SINE Alu 31 118 -24 30 27 0 0 chr10 133420131 133420168 -6896597 + AT_rich Low_complexity Low_complexity 1 37 0 1150 149 12 46 chr10 133420302 133420543 -6896222 - AluSq SINE Alu -1 312 80 246 290 93 19 chr10 133420730 133420892 -6895873 + L1M4 LINE L1 3407 3580 -2566 733 185 269 17 chr10 133420901 133421139 -6895626 - AluSg SINE Alu -1 299 2 336 323 24 0 chr10 133421139 133421306 -6895459 - L1M4 LINE L1 -2387 3759 3589 2485 67 0 19 chr10 133421308 133421624 -6895141 + AluY SINE Alu 1 310 -1 608 136 168 16 chr10 133421634 133421759 -6895006 + FRAM SINE Alu 20 163 -13 298 261 112 31 chr10 133421794 133421955 -6894810 - L1M4 LINE L1 -2566 3580 3407 466 118 0 0 chr10 133422260 133422328 -6894437 + FRAM/FAM SINE Alu 20 87 -98 1711 146 4 4 chr10 133422698 133422952 -6893813 + AluSx SINE Alu 1 254 -58 278 231 121 54 chr10 133423126 133423321 -6893444 - MIR SINE MIR -60 202 4 297 309 31 47 chr10 133424348 133424539 -6892226 + L1ME LINE L1 5445 5632 -489 428 136 74 0 chr10 133424539 133424620 -6892145 + L1MB4 LINE L1 6088 6174 -6 440 289 126 20 chr10 133425244 133425568 -6891197 + Tigger8 DNA MER2_type 97 501 -165 1330 195 141 57 chr10 133425845 133426342 -6890423 - MLT1F1 LTR MaLR -8 559 19 855 153 0 0 chr10 133426612 133426730 -6890035 + AluJb SINE Alu 1 118 -194 1329 150 0 14 chr10 133426780 133426993 -6889772 - MER6B DNA MER2_type 0 210 1 21 36 0 0 chr10 133427047 133427075 -6889690 + AT_rich Low_complexity Low_complexity 1 28 0 463 200 0 12 chr10 133427317 133427402 -6889363 + AluJb SINE Alu 84 167 -145 187 243 43 29 chr10 133427725 133427795 -6888970 + MIR SINE MIR 122 192 -70 268 281 120 42 chr10 133428627 133428794 -6887971 - MIR SINE MIR -6 256 77 478 226 120 0 chr10 133430123 133430256 -6886509 - MER58B DNA MER1_type 0 341 193 335 296 92 31 chr10 133430926 133431038 -6885727 - MIR SINE MIR -7 255 124 999 174 39 29 chr10 133431038 133431245 -6885520 - MER3 DNA MER1_type 0 209 1 335 296 92 31 chr10 133431245 133431328 -6885437 - MIR SINE MIR -138 124 48 210 298 79 35 chr10 133431765 133431879 -6884886 - L2 LINE L2 -9 3263 3145 2016 208 133 88 chr10 133432024 133432766 -6883999 - MER21B LTR ERV1 -69 794 19 338 238 77 23 chr10 133433511 133433670 -6883095 - MIR SINE MIR -67 141 5 220 186 14 57 chr10 133435287 133435357 -6881408 - MIR SINE MIR -14 248 182 918 132 8 0 chr10 133435754 133435883 -6880882 - MER61D LTR ERV1 0 501 372 1300 138 40 36 chr10 133435883 133436136 -6880629 + AluSq SINE Alu 1 254 -59 619 220 34 28 chr10 133436308 133436485 -6880280 - LTR28 LTR ERV1 -842 178 1 189 274 9 80 chr10 133438257 133438370 -6878395 - MIR SINE MIR -46 216 112 435 241 0 80 chr10 133439177 133439314 -6877451 + MIR SINE MIR 51 176 -86 181 290 90 30 chr10 133441865 133441965 -6874800 + MIR SINE MIR 45 150 -112 228 321 46 9 chr10 133442402 133442511 -6874254 - MIR SINE MIR -116 146 34 320 263 50 0 chr10 133442641 133442740 -6874025 - MIR SINE MIR -62 146 43 2147 107 9 22 chr10 133442789 133443106 -6873659 + AluSq SINE Alu 1 313 0 4265 185 48 48 chr10 133444459 133444549 -6872216 - L1MB7 LINE L1 0 6184 6095 931 143 0 0 chr10 133444549 133444682 -6872083 - FLAM_C SINE Alu 0 133 1 4265 185 48 48 chr10 133444682 133445526 -6871239 - L1MB7 LINE L1 -89 6095 5252 2343 90 0 3 chr10 133445526 133445825 -6870940 - AluSx SINE Alu -14 298 1 2099 73 96 0 chr10 133445835 133446107 -6870658 - AluSq SINE Alu -15 298 1 4265 185 48 48 chr10 133446107 133446405 -6870360 - L1MB7 LINE L1 -941 5243 4943 352 200 157 22 chr10 133446731 133446882 -6869883 - MIR SINE MIR -67 141 23 393 301 101 5 chr10 133447000 133447219 -6869546 - MIR SINE MIR -15 247 8 351 263 68 8 chr10 133448594 133448712 -6868053 - MIR SINE MIR -79 183 59 392 311 24 24 chr10 133449007 133449174 -6867591 - MER5B DNA MER1_type -11 167 1 2139 91 49 0 chr10 133450070 133450355 -6866410 + AluSq SINE Alu 1 299 -14 521 288 0 3 chr10 133451212 133451417 -6865348 + MLT1J LTR MaLR 59 311 -200 288 268 10 31 chr10 133451473 133451570 -6865195 + MLT1J LTR MaLR 403 497 -14 2092 122 37 3 chr10 133451658 133451952 -6864813 + AluSg SINE Alu 1 304 -6 1847 121 21 0 chr10 133452269 133452550 -6864215 - MER57A LTR ERV1 0 403 117 231 36 0 0 chr10 133452651 133452679 -6864086 + (CA)n Simple_repeat Simple_repeat 1 28 0 416 200 0 0 chr10 133452679 133452754 -6864011 - MLT1E LTR MaLR -441 152 78 373 266 11 11 chr10 133452782 133452876 -6863889 - MLT1E LTR MaLR -560 94 1 368 135 14 40 chr10 133452876 133452949 -6863816 + MLT1F1 LTR MaLR 494 564 -3 247 98 0 59 chr10 133453077 133453128 -6863637 + L1MB4 LINE L1 6132 6179 -1 314 280 80 0 chr10 133453170 133453295 -6863470 - MIR SINE MIR -48 214 80 2355 100 0 0 chr10 133453707 133454017 -6862748 - AluSx SINE Alu -2 310 1 345 244 160 8 chr10 133455533 133455664 -6861101 - L1M4 LINE L1 -1498 4648 4498 1212 228 142 16 chr10 133455683 133456134 -6860631 - L1MC4 LINE L1 -1983 5993 5486 1495 236 117 38 chr10 133456137 133456845 -6859920 - L1MC4 LINE L1 -2665 3415 2652 267 299 65 0 chr10 133456864 133456971 -6859794 - L1MC4 LINE L1 -5906 164 51 1749 186 10 0 chr10 133457030 133457325 -6859440 - AluJb SINE Alu -14 298 1 517 237 84 90 chr10 133457341 133457696 -6859069 - L1M4 LINE L1 -2411 3735 3383 1704 155 7 7 chr10 133457698 133457969 -6858796 + AluJb SINE Alu 11 281 -31 389 219 0 50 chr10 133458306 133458425 -6858340 + AluY SINE Alu 188 294 -7 2032 150 0 0 chr10 133458487 133458780 -6857985 - AluJb SINE Alu -19 293 1 847 217 0 0 chr10 133458919 133459080 -6857685 + AluJb SINE Alu 134 294 -18 300 236 154 28 chr10 133459084 133459207 -6857558 - L1M4 LINE L1 -2943 3203 3048 2284 91 0 14 chr10 133459207 133459504 -6857261 - AluSc SINE Alu -16 293 1 300 236 154 28 chr10 133459504 133459562 -6857203 - L1M4 LINE L1 -3098 3048 2999 1392 151 9 5 chr10 133459562 133459781 -6856984 + AluJb SINE Alu 85 304 -8 284 268 178 8 chr10 133459977 133460354 -6856411 - L1M4 LINE L1 -3417 2729 2289 817 211 60 60 chr10 133460376 133460608 -6856157 - AluJo SINE Alu -39 273 42 1387 193 50 33 chr10 133461131 133461679 -6855086 - L1MD2 LINE L1 -10 6349 5752 393 250 208 0 chr10 133461845 133461989 -6854776 - L1ME3A LINE L1 -8 6162 5989 423 141 0 0 chr10 133462003 133462067 -6854698 - AluS SINE Alu -248 65 2 962 167 7 0 chr10 133462086 133462236 -6854529 - AluJb SINE Alu -26 286 136 1719 261 79 39 chr10 133462256 133462519 -6854246 - L1ME3A LINE L1 -183 5987 5736 2236 100 17 3 chr10 133462519 133462810 -6853955 - AluSq SINE Alu -18 295 1 1719 261 79 39 chr10 133462810 133462997 -6853768 - L1ME3A LINE L1 -434 5736 5558 3791 106 5 30 chr10 133462997 133463565 -6853200 - MER41A LTR ERV1 0 554 1 1719 261 79 39 chr10 133463565 133463941 -6852824 - L1ME3A LINE L1 -612 5558 5103 864 209 119 56 chr10 133463956 133464457 -6852308 - LTR48 LTR ERV1 -17 770 157 251 229 193 43 chr10 133464552 133464623 -6852142 - L1ME3A LINE L1 -1091 5055 4996 2019 118 136 0 chr10 133464623 133464955 -6851810 - MER51B LTR ERV1 0 377 1 251 229 193 43 chr10 133464955 133465023 -6851742 - L1ME3A LINE L1 -1150 4996 4895 1929 113 77 0 chr10 133465024 133465298 -6851467 - AluSx SINE Alu -17 295 1 1461 210 7 3 chr10 133465311 133465601 -6851164 - AluJo SINE Alu -21 291 1 10976 180 34 8 chr10 133465683 133469013 -6847752 - L1PB1 LINE L1 -1 6150 2735 333 0 0 0 chr10 133469689 133469726 -6847039 + (T)n Simple_repeat Simple_repeat 1 37 0 193 182 91 0 chr10 133469745 133469789 -6846976 - MIR SINE MIR -178 84 37 357 343 63 0 chr10 133470204 133470347 -6846418 + L2 LINE L2 3121 3272 0 854 254 109 6 chr10 133470483 133470830 -6845935 - MER69 DNA AcHobo -2 2524 2142 2201 203 69 114 chr10 133471290 133471380 -6845385 - L1ME3A LINE L1 -4 6166 6074 231 54 0 0 chr10 133471380 133471417 -6845348 + Alu SINE Alu 266 302 0 2201 203 69 114 chr10 133471417 133471750 -6845015 - L1ME3A LINE L1 -96 6074 5754 2164 103 3 7 chr10 133471750 133472050 -6844715 + AluSp SINE Alu 1 299 -14 2201 203 69 114 chr10 133472050 133472372 -6844393 - L1ME3A LINE L1 -416 5754 5419 593 156 89 0 chr10 133472377 133472512 -6844253 - MER69 DNA AcHobo -381 2145 1999 1526 263 137 55 chr10 133472520 133473496 -6843269 + L1MC4a LINE L1 5755 6831 -977 2222 98 7 0 chr10 133473496 133473781 -6842984 + AluSx SINE Alu 6 292 -20 1526 263 137 55 chr10 133473781 133473893 -6842872 + L1MC4a LINE L1 6831 6932 -876 * 1647 221 157 43 chr10 133473873 133474530 -6842235 + L1MC4 LINE L1 7308 8039 -3 435 187 11 11 chr10 133474541 133474632 -6842133 - MER69 DNA AcHobo -512 2014 1924 21 0 0 0 chr10 133474769 133474790 -6841975 + AT_rich Low_complexity Low_complexity 1 21 0 712 81 0 0 chr10 133474899 133474986 -6841779 - AluSg/x SINE Alu -16 293 207 3816 196 27 53 chr10 133475045 133476038 -6840727 - LTR5 LTR ERVK 0 969 3 1023 286 108 23 chr10 133476080 133476776 -6839989 + L1ME3A LINE L1 5170 5927 -243 687 133 10 0 chr10 133477260 133477358 -6839407 + L1PA10 LINE L1 6062 6160 -8 591 173 115 53 chr10 133477461 133477669 -6839096 - MER69 DNA AcHobo -30 2496 2276 875 213 193 10 chr10 133477671 133477762 -6839003 - MER69 DNA AcHobo -720 1806 1733 2309 112 0 13 chr10 133477762 133478074 -6838691 - AluSg SINE Alu 0 310 3 875 213 193 10 chr10 133478074 133478283 -6838482 - MER69 DNA AcHobo -793 1733 1451 1439 166 65 11 chr10 133478290 133478568 -6838197 - L1MB7 LINE L1 -1 6183 5891 3824 111 4 4 chr10 133479456 133479963 -6836802 + MER9 LTR ERVK 1 507 -4 38317 39 30 7 chr10 133480202 133484920 -6831845 + L1P LINE L1 1 4829 -1317 1391 145 0 0 chr10 133485093 133485286 -6831479 - AluJo SINE Alu -119 193 1 513 311 0 8 chr10 133485367 133485489 -6831276 + MER91A DNA MER1_type 2 122 -74 28 78 0 0 chr10 133485703 133485754 -6831011 + AT_rich Low_complexity Low_complexity 1 51 0 4411 137 4 11 chr10 133486246 133487010 -6829755 - L1P LINE L1 -2416 3730 2972 1999 115 3 14 chr10 133487404 133487735 -6829030 + AluSg SINE Alu 1 328 0 1753 112 7 34 chr10 133487814 133488108 -6828657 + AluSp SINE Alu 1 286 -27 268 90 60 15 chr10 133488140 133488207 -6828558 + (TA)n Simple_repeat Simple_repeat 2 71 0 817 66 19 0 chr10 133488607 133488713 -6828052 - AluSp SINE Alu -205 108 1 2180 115 0 10 chr10 133488713 133489018 -6827747 - AluSx SINE Alu -10 302 1 181 163 41 0 chr10 133489464 133489513 -6827252 + CT-rich Low_complexity Low_complexity 2 52 0 968 133 104 3 chr10 133489886 133490190 -6826575 + MSTA LTR MaLR 1 428 0 1110 48 0 14 chr10 133491004 133491150 -6825615 - AluY SINE Alu 0 311 168 2997 175 20 2 chr10 133492195 133492743 -6824022 - L1MA4 LINE L1 -306 5994 5437 1216 187 65 11 chr10 133492783 133493061 -6823704 - AluSg SINE Alu -5 295 3 204 163 0 0 chr10 133493224 133493267 -6823498 + CT-rich Low_complexity Low_complexity 3 45 0 338 138 35 0 chr10 133493375 133493433 -6823332 - MSTA LTR MaLR -368 60 1 4617 168 45 8 chr10 133495233 133496085 -6820680 - L1PA13 LINE L1 -4627 2160 1239 450 288 34 39 chr10 133496251 133496456 -6820309 + Charlie8 DNA MER1_type 8 211 -2206 1505 189 42 6 chr10 133496666 133496978 -6819787 + MER52A LTR ERV1 1433 1755 0 364 206 10 10 chr10 133498493 133498595 -6818170 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 463 195 18 0 chr10 133498703 133498816 -6817949 + (TA)n Simple_repeat Simple_repeat 2 116 0 4928 206 27 20 chr10 133500154 133501365 -6815400 - L1P LINE L1 -1963 4183 2964 470 293 60 12 chr10 133501476 133501643 -6815122 + MIR SINE MIR 13 187 -75 390 259 71 18 chr10 133501637 133501749 -6815016 + L2 LINE L2 3194 3311 -2 * 248 188 101 0 chr10 133501740 133501809 -6814956 + MIR SINE MIR 187 262 0 * 2276 168 37 0 chr10 133503622 133504026 -6812739 + L1MA5A LINE L1 5603 6021 -276 2344 50 40 3 chr10 133504028 133504328 -6812437 - AluY SINE Alu 0 311 1 180 77 0 0 chr10 133505236 133505262 -6811503 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr10 133505309 133505333 -6811432 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1422 195 7 34 chr10 133506552 133506850 -6809915 - AluJo SINE Alu -22 290 1 2443 199 94 4 chr10 133506928 133507499 -6809266 - L1MA7 LINE L1 -4 6287 5661 27 29 0 0 chr10 133507824 133507858 -6808907 + AT_rich Low_complexity Low_complexity 1 34 0 286 244 158 0 chr10 133508053 133508135 -6808630 - MER5A DNA MER1_type -93 96 2 240 286 129 18 chr10 133508657 133508828 -6807937 + MIR SINE MIR 2 191 -71 2221 114 78 0 chr10 133508834 133509194 -6807571 - LTR10B LTR ERV1 -2 503 116 1497 91 13 47 chr10 133509373 133509605 -6807160 + AluSc SINE Alu 49 272 -37 1690 170 32 0 chr10 133510708 133510985 -6805780 + AluJb SINE Alu 1 286 -26 2730 73 50 6 chr10 133511022 133511380 -6805385 + L1PA11 LINE L1 5801 6174 0 2062 130 7 10 chr10 133511541 133511842 -6804923 - AluSx SINE Alu -12 300 1 219 298 0 18 chr10 133512027 133512084 -6804681 - L2 LINE L2 -13 3259 3204 371 67 0 0 chr10 133512092 133512137 -6804628 + LTR10B LTR ERV1 1 45 -460 1891 150 0 0 chr10 133512262 133512542 -6804223 - AluSx SINE Alu -32 280 1 266 230 14 14 chr10 133512542 133512616 -6804149 - L1MEc LINE L1 -4756 1640 1567 21 0 0 0 chr10 133512616 133512637 -6804128 + AT_rich Low_complexity Low_complexity 1 21 0 1825 132 60 20 chr10 133512650 133512999 -6803766 - L1MA5A LINE L1 -5 6292 5930 899 159 41 0 chr10 133512999 133513144 -6803621 - THE1C LTR MaLR 0 375 225 786 133 0 9 chr10 133513144 133513257 -6803508 - AluSq/x SINE Alu -200 113 2 1747 118 30 7 chr10 133513259 133513555 -6803210 - L1MA5A LINE L1 -692 5605 5303 337 206 0 0 chr10 133513554 133513617 -6803148 + L1 LINE L1 4489 4551 -1595 * 1959 131 0 59 chr10 133513835 133514156 -6802609 + AluSx SINE Alu 1 302 -10 1875 124 21 36 chr10 133515209 133515263 -6801502 + L1 LINE L1 4540 4593 -1553 2240 75 0 34 chr10 133515263 133515558 -6801207 - AluY SINE Alu -26 285 1 1875 124 21 36 chr10 133515558 133515834 -6800931 + L1 LINE L1 4593 4865 -1281 1739 189 0 10 chr10 133515834 133516130 -6800635 - AluJb SINE Alu -17 295 3 555 16 0 0 chr10 133516421 133516485 -6800280 + (TG)n Simple_repeat Simple_repeat 2 65 0 316 253 13 0 chr10 133516807 133516886 -6799879 - L1MB8 LINE L1 0 6178 6099 2371 247 73 48 chr10 133516943 133517727 -6799038 + MER69 DNA AcHobo 565 1367 -1159 7970 13 3 0 chr10 133518031 133519367 -6797398 - L1PA2 LINE L1 -2 6153 4788 1149 184 3 52 chr10 133519519 133519832 -6796933 + L1 LINE L1 4847 5122 -1024 1280 215 9 0 chr10 133519832 133520065 -6796700 + AluJo SINE Alu 60 294 -18 1140 137 11 0 chr10 133520065 133520255 -6796510 + L1 LINE L1 5110 5301 -845 739 264 156 24 chr10 133520258 133520937 -6795828 - L1MEc LINE L1 -4826 1389 808 661 195 55 0 chr10 133520930 133521094 -6795671 - L1MC3 LINE L1 0 7785 7613 * 2163 82 11 7 chr10 133521103 133521382 -6795383 - AluSx SINE Alu -15 297 18 5555 47 5 3 chr10 133521382 133522020 -6794745 + L1PA5 LINE L1 5515 6153 -1 2130 144 0 0 chr10 133522301 133522607 -6794158 - AluSx SINE Alu -6 306 1 578 276 176 6 chr10 133522708 133523021 -6793744 - L1ME4a LINE L1 -295 5826 5439 1777 96 28 16 chr10 133523021 133523299 -6793466 + AluSp SINE Alu 31 311 0 578 276 176 6 chr10 133523299 133523369 -6793396 - L1ME4a LINE L1 -682 5439 5382 410 301 18 0 chr10 133523651 133523764 -6793001 + MIR SINE MIR 20 134 -128 284 187 55 66 chr10 133525149 133525240 -6791525 - L1ME LINE L1 -301 5820 5731 565 240 73 21 chr10 133525349 133525541 -6791224 + MIR SINE MIR 17 218 -44 346 273 14 43 chr10 133525573 133525712 -6791053 + L1MC5 LINE L1 7773 7907 -54 1100 165 0 0 chr10 133525712 133525882 -6790883 - FRAM SINE Alu -5 171 2 596 214 0 88 chr10 133526194 133526376 -6790389 - FRAM SINE Alu 0 166 1 8595 72 126 19 chr10 133527734 133528986 -6787779 - SVA Other Other 0 1386 1 2276 82 0 20 chr10 133529748 133530042 -6786723 - AluY SINE Alu -23 288 1 701 232 47 55 chr10 133530079 133530333 -6786432 + MIR SINE MIR 2 253 -9 360 0 0 0 chr10 133531009 133531049 -6785716 + (CA)n Simple_repeat Simple_repeat 2 41 0 291 296 83 28 chr10 133532741 133532957 -6783808 - L1MC4a LINE L1 -1914 5894 5667 5796 93 0 0 chr10 133532966 133533859 -6782906 - L1PA14 LINE L1 -2 6159 5209 16590 138 119 18 chr10 133533859 133534740 -6782025 - L1PA12 LINE L1 -3964 3620 2829 2164 131 0 0 chr10 133534740 133535038 -6781727 - AluSx SINE Alu -14 298 1 16590 138 119 18 chr10 133535038 133537459 -6779306 - L1PA12 LINE L1 -4755 2829 5 327 277 121 51 chr10 133537465 133537797 -6778968 - L1MC4a LINE L1 -484 5680 5326 343 307 109 37 chr10 133538793 133539142 -6777623 + L2 LINE L2 2807 3180 -133 2027 138 38 0 chr10 133539341 133539631 -6777134 + AluJb SINE Alu 1 301 -11 886 166 69 0 chr10 133539760 133539935 -6776830 - L1MD1 LINE L1 -1 6241 6055 258 207 17 0 chr10 133539992 133540050 -6776715 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 939 299 132 28 chr10 133541435 133542200 -6774565 - L2 LINE L2 0 3313 2462 816 303 54 11 chr10 133542204 133542546 -6774219 - MLT1I LTR MaLR 0 409 70 239 115 279 0 chr10 133542592 133542653 -6774112 - L2 LINE L2 -859 2455 2378 477 241 159 30 chr10 133543734 133543938 -6772827 - MLT1G1 LTR MaLR 0 595 314 310 211 218 23 chr10 133544055 133544188 -6772577 - MLT1G1 LTR MaLR -312 237 79 180 0 0 0 chr10 133545828 133545848 -6770917 + (CA)n Simple_repeat Simple_repeat 2 21 0 661 132 18 18 chr10 133548595 133548709 -6768056 + FRAM SINE Alu 46 159 -17 2832 82 0 14 chr10 133549025 133549392 -6767373 - THE1B LTR MaLR -2 362 1 252 0 0 0 chr10 133549551 133549579 -6767186 + (TG)n Simple_repeat Simple_repeat 2 29 0 907 159 67 20 chr10 133551741 133551936 -6764829 - MER20 DNA MER1_type 0 219 16 245 272 0 58 chr10 133552444 133552547 -6764218 + (GGGTG)n Simple_repeat Simple_repeat 5 101 0 251 254 132 35 chr10 133552588 133552702 -6764063 + L2 LINE L2 3189 3313 0 222 297 0 0 chr10 133552864 133552928 -6763837 - MIR SINE MIR -19 243 180 200 250 65 22 chr10 133556410 133556502 -6760263 - L2 LINE L2 -17 3296 3201 1871 80 0 0 chr10 133557504 133557729 -6759036 - AluY SINE Alu -11 300 76 206 238 79 0 chr10 133557758 133557821 -6758944 + L2 LINE L2 3203 3270 -2 567 213 85 6 chr10 133557982 133558146 -6758619 + MIR SINE MIR 83 259 -3 331 357 106 6 chr10 133558402 133558920 -6757845 + L1ME LINE L1 4465 5034 -1112 755 263 138 19 chr10 133559256 133559568 -6757197 + L1ME LINE L1 5455 5803 -318 2233 110 0 3 chr10 133560335 133560634 -6756131 + AluSg SINE Alu 1 298 -12 575 245 90 43 chr10 133560955 133561188 -6755577 - L1MC4 LINE L1 0 8042 7799 289 280 35 57 chr10 133561351 133561589 -6755176 - L1MC4 LINE L1 -393 7649 7317 681 136 0 0 chr10 133561589 133561692 -6755073 + AluJb SINE Alu 5 107 -205 942 269 56 54 chr10 133561723 133561967 -6754798 - L1MC4 LINE L1 -547 7495 7253 2103 147 0 0 chr10 133561967 133562279 -6754486 - AluSx SINE Alu 0 312 1 942 269 56 54 chr10 133562279 133562571 -6754194 - L1MC4 LINE L1 -789 7253 6960 1847 156 102 20 chr10 133562655 133563046 -6753719 - L1MB7 LINE L1 -16 6168 5746 1939 101 13 38 chr10 133563603 133563919 -6752846 - AluSx SINE Alu -4 308 1 2380 96 0 0 chr10 133564889 133565182 -6751583 + AluSx SINE Alu 1 293 -19 262 325 12 0 chr10 133565942 133566025 -6750740 + (TG)n Simple_repeat Simple_repeat 1 84 0 312 255 106 62 chr10 133569323 133569484 -6747281 - L1M4 LINE L1 -3016 3130 2963 233 240 52 110 chr10 133569506 133569660 -6747105 + MER5A DNA MER1_type 44 188 -1 2313 108 0 0 chr10 133569929 133570226 -6746539 + AluSg SINE Alu 1 297 -13 216 0 0 0 chr10 133572624 133572648 -6744117 + (T)n Simple_repeat Simple_repeat 1 24 0 799 162 107 14 chr10 133575842 133576058 -6740707 - Charlie5 DNA MER1_type 0 2624 2389 1612 211 85 20 chr10 133576625 133577027 -6739738 + MER63B DNA MER1_type 6 433 -3 2335 134 103 0 chr10 133577273 133577661 -6739104 + MSTA LTR MaLR 1 428 0 340 222 188 0 chr10 133578828 133578945 -6737820 + MIR SINE MIR 80 218 -44 2343 75 0 7 chr10 133579019 133579324 -6737441 + AluSx SINE Alu 1 303 -9 376 276 79 8 chr10 133580001 133580128 -6736637 + MIR SINE MIR 121 256 -6 395 276 55 0 chr10 133580463 133580590 -6736175 - MER94 DNA DNA 0 134 1 409 226 32 0 chr10 133581504 133581597 -6735168 + HAL1b LINE L1 733 828 -520 502 321 114 3 chr10 133582024 133582323 -6734442 + L1MEd LINE L1 476 807 -5312 27 62 0 0 chr10 133582690 133582738 -6734027 + AT_rich Low_complexity Low_complexity 1 48 0 11014 176 170 48 chr10 133583323 133586271 -6730494 + L1PA11 LINE L1 1075 4383 -1763 5796 75 86 3 chr10 133586391 133587670 -6729095 + L1PA11 LINE L1 4787 6174 0 352 281 176 22 chr10 133587670 133587937 -6728828 + L1ME LINE L1 5341 5648 -2160 329 258 0 11 chr10 133588169 133588258 -6728507 + L1MC5 LINE L1 7830 7917 -44 630 246 200 0 chr10 133591052 133591227 -6725538 - MER63A DNA MER1_type 0 210 1 575 259 294 26 chr10 133591293 133591606 -6725159 + L1MDa LINE L1 28 424 -6116 1313 196 71 119 chr10 133591706 133592141 -6724624 + L1MDa LINE L1 1794 2248 -4292 873 188 125 5 chr10 133592141 133592333 -6724432 + MER20 DNA MER1_type 1 215 -4 1313 196 71 119 chr10 133592333 133593025 -6723740 + L1MDa LINE L1 2248 2980 -3560 288 251 150 24 chr10 133593156 133593323 -6723442 + L1ME LINE L1 5586 5773 -348 275 235 133 10 chr10 133593725 133593823 -6722942 - MER94 DNA DNA 0 134 25 562 219 194 0 chr10 133593895 133594050 -6722715 - MIR SINE MIR -26 236 52 1091 241 188 20 chr10 133594825 133595219 -6721546 - L1ME1 LINE L1 -5 6161 5702 2246 67 40 0 chr10 133596885 133597183 -6719582 - AluY SINE Alu -1 310 1 218 329 73 0 chr10 133599101 133599183 -6717582 + L2 LINE L2 3179 3266 -6 324 356 40 7 chr10 133600355 133600504 -6716261 + MIR SINE MIR 78 231 -31 23 0 0 0 chr10 133602043 133602066 -6714699 + AT_rich Low_complexity Low_complexity 1 23 0 815 132 16 0 chr10 133602089 133602218 -6714547 + AluSq/x SINE Alu 3 133 -180 320 285 66 15 chr10 133603044 133603181 -6713584 + MIR3 SINE MIR 62 205 -3 2129 116 0 0 chr10 133604456 133604759 -6712006 + AluSc SINE Alu 1 303 -6 4997 90 14 1 chr10 133605540 133606239 -6710526 + L1PA13 LINE L1 5456 6163 0 414 0 0 0 chr10 133607970 133608016 -6708749 + (GCTG)n Simple_repeat Simple_repeat 1 46 0 185 265 36 72 chr10 133609113 133609196 -6707569 + L3 LINE CR1 586 665 -912 258 239 0 28 chr10 133609300 133609371 -6707394 + CT-rich Low_complexity Low_complexity 3 71 0 1083 117 0 0 chr10 133609392 133609572 -6707193 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 432 160 0 0 chr10 133609572 133609672 -6707093 + (CAGC)n Simple_repeat Simple_repeat 3 102 0 398 282 173 35 chr10 133609698 133609953 -6706812 - L2 LINE L2 -13 3300 3011 362 269 72 55 chr10 133609947 133610118 -6706647 - MIR SINE MIR -65 143 14 * 224 283 0 0 chr10 133610622 133610675 -6706090 + GA-rich Low_complexity Low_complexity 2 54 0 2692 116 46 14 chr10 133610896 133611311 -6705454 + MSTA LTR MaLR 1 428 0 2194 94 0 3 chr10 133611690 133611988 -6704777 - AluSq SINE Alu -16 297 1 234 282 137 0 chr10 133612665 133612782 -6703983 + MIR SINE MIR 106 238 -24 365 296 112 6 chr10 133613468 133613637 -6703128 - MIR SINE MIR -74 188 2 304 336 66 7 chr10 133615094 133615231 -6701534 + MLT1K LTR MaLR 117 261 -327 409 214 118 11 chr10 133618481 133618603 -6698162 - MIR SINE MIR -5 203 70 2478 164 63 38 chr10 133618618 133619094 -6697671 + MLT1D LTR MaLR 18 505 0 192 306 153 27 chr10 133621152 133621335 -6695430 + MIR SINE MIR 9 214 -48 257 323 97 21 chr10 133622730 133622823 -6693942 - MIR3 SINE MIR -31 177 78 295 296 166 20 chr10 133626521 133626720 -6690045 + L3 LINE CR1 1218 1445 -132 288 307 9 26 chr10 133626806 133626920 -6689845 + (ATGGTG)n Simple_repeat Simple_repeat 2 113 0 * 536 308 6 16 chr10 133626889 133627071 -6689694 + (TGG)n Simple_repeat Simple_repeat 1 180 0 319 295 134 24 chr10 133629539 133629875 -6686890 + MLT1J1 LTR MaLR 74 446 0 2022 112 40 10 chr10 133630273 133630569 -6686196 - AluSx SINE Alu -7 305 1 1607 112 105 0 chr10 133630575 133630833 -6685932 - L1PA15 LINE L1 -2 6163 5879 24 53 0 0 chr10 133630879 133630917 -6685848 + AT_rich Low_complexity Low_complexity 1 38 0 530 268 107 46 chr10 133632545 133632873 -6683892 - L2 LINE L2 0 3313 2966 1626 112 54 2 chr10 133633090 133633118 -6683647 - L1P1 LINE L1 -623 5532 5507 3793 127 40 2 chr10 133633118 133633693 -6683072 - L1PA16 LINE L1 -9 6157 5561 1626 112 54 2 chr10 133633693 133634105 -6682660 - L1P1 LINE L1 -648 5507 5072 * 4379 182 14 7 chr10 133634104 133634954 -6681811 + L1 LINE L1 4160 5015 -1131 724 149 88 14 chr10 133636185 133636333 -6680432 + MER5A DNA MER1_type 1 159 -30 1796 200 16 42 chr10 133636337 133636767 -6679998 - L1MB5 LINE L1 -6 6168 5750 277 268 73 0 chr10 133638821 133638903 -6677862 + MIR SINE MIR 107 194 -68 2353 90 6 6 chr10 133639545 133639856 -6676909 - AluSx SINE Alu -1 311 1 211 254 17 0 chr10 133640417 133640476 -6676289 - MIR SINE MIR -109 153 94 211 236 102 42 chr10 133642005 133642162 -6674603 + MIR3 SINE MIR 21 155 -53 265 215 32 32 chr10 133642675 133642833 -6673932 + (TCTA)n Simple_repeat Simple_repeat 3 160 0 * 401 232 24 0 chr10 133642798 133642966 -6673799 + (TCCA)n Simple_repeat Simple_repeat 2 173 0 595 147 37 0 chr10 133642974 133643083 -6673682 - L2 LINE L2 0 3313 3201 1939 115 87 3 chr10 133643581 133643868 -6672897 + AluSx SINE Alu 1 311 -1 420 20 0 0 chr10 133643868 133643917 -6672848 + (TA)n Simple_repeat Simple_repeat 1 49 0 2138 105 11 0 chr10 133643963 133644249 -6672516 + AluSx SINE Alu 1 289 -23 1957 151 0 38 chr10 133645629 133645948 -6670817 + AluSx SINE Alu 1 307 -5 221 384 13 13 chr10 133646781 133646940 -6669825 + L2 LINE L2 2700 2858 -456 934 121 0 36 chr10 133647168 133647308 -6669457 - FLAM_C SINE Alu -8 135 1 339 339 26 0 chr10 133647341 133647456 -6669309 + L2 LINE L2 3138 3255 -17 258 143 0 0 chr10 133649141 133649190 -6667575 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 247 396 37 6 chr10 133649606 133649770 -6666995 - L3 LINE CR1 -13 1564 1396 2606 127 21 30 chr10 133652374 133652473 -6664292 + MSTC LTR MaLR 1 99 -329 2591 65 0 0 chr10 133652473 133652780 -6663985 + AluY SINE Alu 1 307 -4 2606 127 21 30 chr10 133652780 133653112 -6663653 + MSTC LTR MaLR 99 428 0 369 93 0 0 chr10 133656573 133656627 -6660138 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 228 351 37 8 chr10 133657312 133657446 -6659319 + L2 LINE L2 3175 3312 -1 2231 89 0 43 chr10 133657641 133657970 -6658795 + AluSc SINE Alu 1 309 0 422 364 80 4 chr10 133660613 133660852 -6655913 - MIR SINE MIR -4 258 2 2269 129 0 0 chr10 133661388 133661698 -6655067 + AluSx SINE Alu 1 310 -2 335 298 53 30 chr10 133662742 133662873 -6653892 + MER5B DNA MER1_type 1 134 -44 2640 59 0 0 chr10 133663695 133664001 -6652764 - AluSc SINE Alu 0 309 4 368 302 6 31 chr10 133664240 133664399 -6652366 + (CATA)n Simple_repeat Simple_repeat 3 157 0 203 254 36 0 chr10 133664934 133664989 -6651776 + MER5B DNA MER1_type 21 77 -101 21 57 0 0 chr10 133666232 133666267 -6650498 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 133666518 133666540 -6650225 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 133666801 133666829 -6649936 + AT_rich Low_complexity Low_complexity 1 28 0 2774 70 59 28 chr10 133669197 133669585 -6647180 + L1PA8A LINE L1 5725 6124 -7 26 0 0 0 chr10 133669585 133669611 -6647154 + AT_rich Low_complexity Low_complexity 1 26 0 252 273 31 86 chr10 133669945 133670073 -6646692 - L2 LINE L2 0 3272 3152 270 267 144 50 chr10 133670318 133670600 -6646165 - L2 LINE L2 -292 3021 2767 2270 120 3 0 chr10 133670600 133670908 -6645857 + AluSx SINE Alu 3 311 -1 419 0 20 0 chr10 133670908 133670959 -6645806 + (TA)n Simple_repeat Simple_repeat 2 53 0 270 267 144 50 chr10 133670959 133671070 -6645695 - L2 LINE L2 -545 2768 2592 243 299 52 0 chr10 133671449 133671546 -6645219 + L3 LINE CR1 760 861 -716 2178 117 3 0 chr10 133671694 133671992 -6644773 - AluSq SINE Alu -6 307 9 2001 142 9 0 chr10 133675841 133676159 -6640606 - L1PB3 LINE L1 -6 6148 5828 26 30 0 0 chr10 133676258 133676291 -6640474 + AT_rich Low_complexity Low_complexity 1 33 0 466 233 150 8 chr10 133676445 133676578 -6640187 + MIR SINE MIR 28 179 -83 2366 192 93 18 chr10 133677394 133677993 -6638772 - LTR48B LTR ERV1 0 644 1 375 149 34 34 chr10 133678111 133678286 -6638479 + (TATAA)n Simple_repeat Simple_repeat 2 176 0 586 75 74 47 chr10 133678323 133678670 -6638095 + (TA)n Simple_repeat Simple_repeat 1 356 0 204 175 0 0 chr10 133678715 133678778 -6637987 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 2223 107 7 0 chr10 133679700 133680000 -6636765 + AluSx SINE Alu 1 302 -10 2184 125 3 13 chr10 133681831 133682143 -6634622 + AluSx SINE Alu 1 309 -3 795 219 31 20 chr10 133682224 133682420 -6634345 - L1MB7 LINE L1 0 6184 5987 2289 116 0 3 chr10 133682454 133682764 -6634001 - AluSc SINE Alu 0 309 1 226 300 50 0 chr10 133682768 133682848 -6633917 - MIR SINE MIR -61 201 118 1629 217 38 57 chr10 133682873 133683343 -6633422 + MLT1C LTR MaLR 7 467 0 192 253 221 0 chr10 133684676 133684771 -6631994 - L2 LINE L2 -19 3253 3138 208 313 95 66 chr10 133685005 133685216 -6631549 - L2 LINE L2 -213 3059 2843 249 321 75 22 chr10 133685247 133685381 -6631384 + MIR3 SINE MIR 8 148 -60 254 295 21 0 chr10 133685736 133685831 -6630934 + (TG)n Simple_repeat Simple_repeat 1 97 0 204 248 23 0 chr10 133685843 133685976 -6630789 + (TG)n Simple_repeat Simple_repeat 1 136 0 372 311 11 11 chr10 133685994 133686174 -6630591 + (TG)n Simple_repeat Simple_repeat 1 180 0 267 31 0 0 chr10 133688324 133688356 -6628409 + (T)n Simple_repeat Simple_repeat 1 32 0 1553 200 34 50 chr10 133688657 133689037 -6627728 + MLT1A2 LTR MaLR 1 374 0 446 264 126 35 chr10 133689037 133689198 -6627567 + MLT1K LTR MaLR 370 546 -42 2311 90 3 0 chr10 133689202 133689491 -6627274 - AluSc SINE Alu -15 294 5 258 211 0 0 chr10 133689938 133689990 -6626775 - MIR SINE MIR -81 127 76 450 279 102 42 chr10 133690083 133690484 -6626281 + L2 LINE L2 91 515 -2799 649 300 163 12 chr10 133690693 133691334 -6625431 + L2 LINE L2 2575 3313 0 415 285 142 36 chr10 133694058 133694581 -6622184 - L1M4 LINE L1 -845 5301 4724 4202 205 21 36 chr10 133694601 133695588 -6621177 - L1MB7 LINE L1 -19 6165 5206 2155 127 0 3 chr10 133695588 133695888 -6620877 - AluSx SINE Alu -3 309 11 4202 205 21 36 chr10 133695888 133696234 -6620531 - L1MB7 LINE L1 -978 5206 4857 315 310 65 36 chr10 133696253 133696746 -6620019 - L1MB7 LINE L1 -1443 4703 4197 361 267 64 111 chr10 133699115 133699287 -6617478 - MIR3 SINE MIR -8 200 37 3715 101 2 8 chr10 133699377 133699891 -6616874 - MER9 LTR ERVK 0 511 1 365 290 8 0 chr10 133700052 133700296 -6616469 + (TG)n Simple_repeat Simple_repeat 1 246 0 268 104 0 62 chr10 133700296 133700344 -6616421 + MER4-int LTR ERV1 1112 1156 -5442 472 262 15 0 chr10 133700391 133700743 -6616022 + (TG)n Simple_repeat Simple_repeat 1 357 0 238 278 28 14 chr10 133701840 133701912 -6614853 - MIR SINE MIR -174 88 16 556 189 0 0 chr10 133702449 133702539 -6614226 - 5S rRNA rRNA -31 90 1 477 313 122 5 chr10 133702539 133702753 -6614012 + MIR SINE MIR 19 257 -5 2926 129 9 11 chr10 133703353 133703802 -6612963 + MER83 LTR ERV1 1 448 0 305 317 42 0 chr10 133704545 133704665 -6612100 + L2 LINE L2 2953 3077 -195 2260 154 35 31 chr10 133706395 133706943 -6609822 + MLT2A2 LTR ERVL 1 553 -1 209 314 52 67 chr10 133707257 133707451 -6609314 + L2 LINE L2 2197 2387 -927 298 241 48 0 chr10 133708045 133708128 -6608637 + L2 LINE L2 3186 3272 0 349 267 142 62 chr10 133708334 133709030 -6607735 - L1MB7 LINE L1 -2266 3880 3129 356 239 69 111 chr10 133709339 133709728 -6607037 - L1MB7 LINE L1 -3644 2502 2130 589 305 63 81 chr10 133710516 133711294 -6605471 - L1MEd LINE L1 -5298 821 58 186 255 112 41 chr10 133711550 133711648 -6605117 + L2 LINE L2 3168 3272 0 2664 81 2 78 chr10 133713206 133713614 -6603151 + MER51B LTR ERV1 1 377 0 229 231 0 0 chr10 133714011 133714050 -6602715 + MLT1K LTR MaLR 204 242 -346 2522 66 7 3 chr10 133715896 133716200 -6600565 + AluY SINE Alu 1 305 -6 21 36 0 0 chr10 133716264 133716292 -6600473 + AT_rich Low_complexity Low_complexity 1 28 0 348 237 156 7 chr10 133717063 133717198 -6599567 + L1MA8 LINE L1 6112 6266 -25 607 292 81 25 chr10 133717540 133718041 -6598724 + L2 LINE L2 2714 3250 -63 487 255 161 31 chr10 133718115 133718307 -6598458 - MIR SINE MIR -36 226 10 180 254 127 0 chr10 133718333 133718388 -6598377 - L2 LINE L2 -10 3262 3201 2166 179 53 19 chr10 133719699 133720112 -6596653 + MSTA LTR MaLR 2 428 0 184 240 140 0 chr10 133720687 133720737 -6596028 + L2 LINE L2 3255 3311 -2 1935 132 36 4 chr10 133722044 133722325 -6594440 - AluSg SINE Alu -20 290 1 400 312 74 32 chr10 133722334 133722523 -6594242 - MIR SINE MIR -53 209 13 2144 95 51 7 chr10 133723356 133723651 -6593114 - AluSc SINE Alu -1 308 1 390 204 244 29 chr10 133724028 133724200 -6592565 - MIR SINE MIR -50 212 4 320 265 78 0 chr10 133724699 133724801 -6591964 - MIR SINE MIR -71 191 82 351 318 94 10 chr10 133725193 133725385 -6591380 + MIR SINE MIR 55 262 0 481 356 25 0 chr10 133725395 133725634 -6591131 + L2 LINE L2 2543 2787 -527 2222 108 3 10 chr10 133725640 133725946 -6590819 + AluSx SINE Alu 1 304 -8 335 250 102 23 chr10 133726228 133726356 -6590409 + L2 LINE L2 3175 3312 -1 24 0 0 0 chr10 133726454 133726478 -6590287 + AT_rich Low_complexity Low_complexity 1 24 0 192 40 0 0 chr10 133727741 133727766 -6588999 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7170 45 6 1 chr10 133729271 133730135 -6586630 + L1PA7 LINE L1 5285 6152 -2 914 195 85 0 chr10 133730248 133730448 -6586317 - MER20 DNA MER1_type -2 217 1 324 163 0 142 chr10 133730755 133730877 -6585888 - L1MC4 LINE L1 0 8038 7888 1010 58 72 7 chr10 133730877 133731015 -6585750 - AluSc SINE Alu -2 307 161 421 293 20 7 chr10 133731093 133731240 -6585525 - L1MC4 LINE L1 -131 7911 7763 403 228 44 22 chr10 133731380 133731516 -6585249 - L1MB8 LINE L1 0 6178 6040 2555 44 0 13 chr10 133731626 133731924 -6584841 - AluY SINE Alu -17 294 1 235 322 27 7 chr10 133734526 133734675 -6582090 + GA-rich Low_complexity Low_complexity 1 152 0 320 284 33 7 chr10 133734709 133734860 -6581905 + L1MCa LINE L1 1160 3473 -2953 186 43 0 0 chr10 133734882 133734905 -6581860 + (CA)n Simple_repeat Simple_repeat 1 23 0 412 300 109 19 chr10 133735177 133735387 -6581378 - MIR SINE MIR -8 254 26 216 0 0 0 chr10 133736244 133736268 -6580497 + (T)n Simple_repeat Simple_repeat 1 24 0 2378 112 0 3 chr10 133736600 133736913 -6579852 + AluSx SINE Alu 1 312 0 182 190 207 0 chr10 133737469 133737527 -6579238 - L2 LINE L2 -1 3271 3202 341 265 189 20 chr10 133737923 133738119 -6578646 - MIR SINE MIR -3 259 31 2202 130 0 0 chr10 133738908 133739207 -6577558 - AluSx SINE Alu -13 299 1 206 298 0 0 chr10 133739406 133739463 -6577302 - L2 LINE L2 -7 3265 3209 3549 121 31 2 chr10 133740712 133741224 -6575541 + MER1A DNA MER1_type 1 527 0 275 304 52 17 chr10 133744708 133744823 -6571942 - MIR SINE MIR -74 188 70 266 106 21 0 chr10 133746596 133746643 -6570122 + (TCCA)n Simple_repeat Simple_repeat 2 49 0 497 142 45 34 chr10 133746660 133746836 -6569929 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 257 353 105 14 chr10 133746878 133747229 -6569536 - L2 LINE L2 -84 3188 2806 537 240 97 23 chr10 133747367 133747584 -6569181 - MIR SINE MIR -14 248 16 1998 134 7 19 chr10 133748034 133748341 -6568424 - AluSx SINE Alu -9 303 1 180 282 104 71 chr10 133748652 133748825 -6567940 - L2 LINE L2 -384 2930 2764 2232 112 26 0 chr10 133748825 133749129 -6567636 - AluSx SINE Alu 0 312 1 180 282 104 71 chr10 133749129 133749405 -6567360 - L2 LINE L2 -550 2764 2466 666 245 48 88 chr10 133749532 133749616 -6567149 + MIR SINE MIR 1 87 -175 2157 121 129 5 chr10 133749616 133749995 -6566770 - MSTA LTR MaLR -2 426 1 666 245 48 88 chr10 133749995 133750183 -6566582 + MIR SINE MIR 87 262 0 2319 110 0 7 chr10 133750821 133751129 -6565636 + AluSc SINE Alu 3 308 -1 2008 130 18 0 chr10 133751450 133751782 -6564983 + AluSx SINE Alu 1 337 0 207 0 0 0 chr10 133752114 133752137 -6564628 + (A)n Simple_repeat Simple_repeat 1 23 0 1494 163 89 44 chr10 133752871 133753128 -6563637 + L1MA8 LINE L1 5912 6191 -100 2100 135 3 19 chr10 133753128 133753440 -6563325 + AluSq SINE Alu 1 307 -6 1494 163 89 44 chr10 133753440 133753543 -6563222 + L1MA8 LINE L1 6191 6288 -3 272 244 24 24 chr10 133753695 133753777 -6562988 + LTR37B LTR ERV1 11 92 -376 694 211 90 24 chr10 133753827 133753993 -6562772 + MER58A DNA MER1_type 45 221 -3 854 226 112 68 chr10 133753997 133754337 -6562428 + LTR37B LTR ERV1 114 468 0 389 360 42 8 chr10 133758276 133758512 -6558253 + MIR SINE MIR 16 259 -3 1253 203 67 117 chr10 133758993 133759471 -6557294 + MLT1C LTR MaLR 6 459 -8 207 0 0 0 chr10 133760335 133760358 -6556407 + (TC)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr10 133760771 133760794 -6555971 + AT_rich Low_complexity Low_complexity 1 23 0 210 171 0 0 chr10 133761758 133761799 -6554966 + (TG)n Simple_repeat Simple_repeat 1 41 0 483 227 39 47 chr10 133762038 133762166 -6554599 + MLT1L LTR MaLR 244 370 -245 734 229 14 0 chr10 133762455 133762595 -6554170 - MER45A DNA AcHobo -35 143 2 526 178 11 0 chr10 133762623 133762713 -6554052 - MER58B DNA MER1_type -3 338 248 * 659 295 50 33 chr10 133762702 133763158 -6553607 + MLT1K LTR MaLR 90 580 -8 515 308 99 33 chr10 133764048 133764064 -6552701 + L1M4 LINE L1 4875 4889 -1257 2344 110 0 3 chr10 133764064 133764373 -6552392 - AluSx SINE Alu -4 308 1 515 308 99 33 chr10 133764373 133764690 -6552075 + L1M4 LINE L1 4889 5230 -916 326 312 96 13 chr10 133765225 133765382 -6551383 - MER20 DNA MER1_type -45 174 5 357 195 0 122 chr10 133765699 133765829 -6550936 - L1MC4 LINE L1 0 8038 7880 753 73 91 9 chr10 133765850 133765960 -6550805 - AluSc SINE Alu -30 279 161 415 281 22 7 chr10 133766050 133766185 -6550580 - L1MC4 LINE L1 -143 7899 7763 1874 136 3 18 chr10 133767898 133768184 -6548581 + AluSx SINE Alu 1 282 -30 237 245 0 0 chr10 133769123 133769176 -6547589 + L2 LINE L2 3258 3310 -3 529 309 39 15 chr10 133770278 133770482 -6546283 + MIR SINE MIR 54 262 0 2376 100 33 36 chr10 133772365 133772725 -6544040 + THE1B LTR MaLR 1 359 -5 872 149 74 70 chr10 133773769 133773984 -6542781 + MER20 DNA MER1_type 1 216 -3 243 0 0 0 chr10 133778369 133778396 -6538369 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 506 196 0 0 chr10 133778719 133778821 -6537944 - L1MB7 LINE L1 0 6184 6083 1212 73 49 49 chr10 133779596 133779800 -6536965 + AluY SINE Alu 103 306 -5 826 256 22 4 chr10 133780733 133780960 -6535805 - L1MD2 LINE L1 -2 6357 6127 236 278 11 56 chr10 133781017 133781107 -6535658 - MIR SINE MIR -2 260 175 326 178 96 14 chr10 133781415 133781488 -6535277 - MIR SINE MIR -99 163 85 340 154 0 0 chr10 133781488 133781540 -6535225 - MLT2B3 LTR ERVL 0 554 503 729 75 0 70 chr10 133781540 133781797 -6534968 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 878 155 6 25 chr10 133781944 133782105 -6534660 - MLT2B3 LTR ERVL -396 158 1 224 253 72 12 chr10 133782105 133782188 -6534577 - MIR SINE MIR -173 89 2 697 287 5 5 chr10 133783455 133783650 -6533115 + MIR SINE MIR 16 210 -52 260 310 155 7 chr10 133785336 133785491 -6531274 + MER5B DNA MER1_type 1 178 0 409 260 47 16 chr10 133785631 133785758 -6531007 + MIR3 SINE MIR 48 178 -30 240 111 0 0 chr10 133786196 133786232 -6530533 + (ATG)n Simple_repeat Simple_repeat 1 36 0 214 308 0 0 chr10 133787356 133787408 -6529357 - L2 LINE L2 -31 3241 3190 434 300 166 36 chr10 133787875 133788315 -6528450 + L2 LINE L2 2809 3305 -8 233 363 137 9 chr10 133788331 133788543 -6528222 - MIR SINE MIR -6 256 18 1451 170 74 51 chr10 133790174 133790510 -6526255 - MER2 DNA MER2_type 0 344 1 262 276 235 10 chr10 133790849 133790947 -6525818 + L2 LINE L2 3151 3270 -2 949 65 0 0 chr10 133791091 133791215 -6525550 - AluY SINE Alu -13 298 175 949 65 0 0 chr10 133791772 133791896 -6524869 - AluY SINE Alu -13 298 175 362 260 0 144 chr10 133793230 133793376 -6523389 - MIR SINE MIR -18 190 65 990 212 59 156 chr10 133795217 133796008 -6520757 + L1MC5 LINE L1 7048 7762 -199 2626 128 34 0 chr10 133796550 133796964 -6519801 - MSTA LTR MaLR 0 428 1 3575 123 19 8 chr10 133797206 133797728 -6519037 - MER1A DNA MER1_type 0 529 2 2529 168 33 37 chr10 133797911 133798430 -6518335 - L1MB3 LINE L1 -1 6182 5666 4331 78 7 0 chr10 133798814 133799363 -6517402 - MER41A LTR ERV1 -1 553 1 832 133 203 0 chr10 133800374 133800532 -6516233 + MER3 DNA MER1_type 1 190 -19 313 339 48 18 chr10 133800532 133800697 -6516068 - MER5A DNA MER1_type -8 181 12 355 293 98 101 chr10 133801160 133801484 -6515281 + L2 LINE L2 2379 2703 -611 1475 177 0 4 chr10 133801484 133801744 -6515021 + AluJb SINE Alu 37 295 -17 355 293 98 101 chr10 133801744 133801876 -6514889 + L2 LINE L2 2703 2834 -480 283 258 174 45 chr10 133802099 133802231 -6514534 + L2 LINE L2 3163 3311 -2 25 75 0 0 chr10 133802446 133802499 -6514266 + AT_rich Low_complexity Low_complexity 1 53 0 1143 295 91 50 chr10 133804273 133804876 -6511889 - L3 LINE CR1 -534 1043 416 225 127 0 111 chr10 133806042 133806105 -6510660 - L1MC/D LINE L1 -2016 5792 5737 2133 110 0 10 chr10 133808854 133809155 -6507610 + AluSx SINE Alu 1 298 -14 332 270 30 0 chr10 133809367 133809467 -6507298 + MER94 DNA DNA 19 121 -13 409 254 205 0 chr10 133809490 133809647 -6507118 - MIR SINE MIR -63 145 2 247 287 239 36 chr10 133810112 133810279 -6506486 - MIR SINE MIR -41 221 21 319 130 0 0 chr10 133811606 133811652 -6505113 - MER53 DNA DNA -5 184 139 442 220 64 0 chr10 133811718 133811827 -6504938 - MER53 DNA DNA -73 116 1 2240 107 0 19 chr10 133812272 133812590 -6504175 + AluSx SINE Alu 1 312 0 426 259 36 0 chr10 133813516 133813628 -6503137 + MIR SINE MIR 68 183 -79 247 296 46 37 chr10 133815095 133815203 -6501562 - MIR SINE MIR -124 138 30 315 285 122 0 chr10 133816557 133816680 -6500085 - MIR3 SINE MIR -63 145 8 537 260 164 6 chr10 133817702 133817879 -6498886 + MIR SINE MIR 46 250 -12 368 264 75 0 chr10 133817921 133818027 -6498738 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 133818209 133818557 -6498208 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 205 311 0 0 chr10 133818586 133818647 -6498118 - MIR SINE MIR -15 247 187 347 261 188 0 chr10 133818682 133818820 -6497945 + MER5A DNA MER1_type 26 189 0 251 191 16 0 chr10 133820770 133820833 -6495932 + C-rich Low_complexity Low_complexity 5 68 0 344 310 14 125 chr10 133821199 133821496 -6495269 + L2 LINE L2 2987 3250 -22 581 320 104 22 chr10 133821522 133821935 -6494830 - L1ME LINE L1 -411 5710 5264 475 302 212 38 chr10 133822581 133823194 -6493571 + L2 LINE L2 1645 2364 -950 2221 189 62 25 chr10 133823222 133823708 -6493057 + MLT1D LTR MaLR 1 504 -1 269 285 76 57 chr10 133826606 133826764 -6490001 + MIR SINE MIR 22 182 -80 240 311 20 33 chr10 133827759 133827910 -6488855 - L2 LINE L2 -856 2458 2310 601 235 49 25 chr10 133828342 133828504 -6488261 + MER97a DNA MER1_type? 14 179 -715 549 197 0 141 chr10 133828745 133828798 -6487967 - L1MC5 LINE L1 -39 7922 7863 216 0 0 0 chr10 133828798 133828822 -6487943 + (CTATT)n Simple_repeat Simple_repeat 2 25 0 549 197 0 141 chr10 133828822 133828966 -6487799 - L1MC5 LINE L1 -98 7863 7753 1963 125 7 0 chr10 133829664 133829964 -6486801 + AluSq SINE Alu 1 302 0 180 0 0 0 chr10 133829966 133829986 -6486779 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr10 133830075 133830097 -6486668 + AT_rich Low_complexity Low_complexity 1 22 0 262 257 128 28 chr10 133832054 133832233 -6484532 - L2 LINE L2 -247 3025 2829 1654 189 44 56 chr10 133832436 133832864 -6483901 + L1MB7 LINE L1 5743 6165 -19 295 304 39 0 chr10 133833099 133833201 -6483564 + MIR SINE MIR 48 153 -109 192 242 176 0 chr10 133834820 133834911 -6481854 - MIR SINE MIR -10 252 146 351 44 0 0 chr10 133834941 133834986 -6481779 + (TG)n Simple_repeat Simple_repeat 2 46 0 222 372 47 0 chr10 133836302 133836450 -6480315 - L2 LINE L2 -220 3052 2898 4034 126 5 10 chr10 133837869 133838486 -6478279 + L1P LINE L1 3658 4271 -1875 225 256 8 35 chr10 133839559 133839679 -6477086 + MIR SINE MIR 91 204 -58 180 212 0 0 chr10 133839792 133839825 -6476940 + L2 LINE L2 3210 3242 -30 574 235 34 67 chr10 133840065 133840118 -6476647 - MIR SINE MIR -11 251 198 2054 122 14 0 chr10 133840118 133840474 -6476291 - AluSx SINE Alu 0 360 1 574 235 34 67 chr10 133840474 133840598 -6476167 - MIR SINE MIR -64 198 79 202 191 48 0 chr10 133840592 133840634 -6476131 - L3 LINE CR1 -328 1249 1206 * 1565 120 7 76 chr10 133841251 133841526 -6475239 + AluJo SINE Alu 42 297 -15 2136 88 0 52 chr10 133841526 133841832 -6474933 + AluSq SINE Alu 18 307 -6 935 206 37 5 chr10 133842444 133842633 -6474132 - MER3 DNA MER1_type -14 195 1 23 33 0 0 chr10 133843237 133843267 -6473498 + AT_rich Low_complexity Low_complexity 1 30 0 231 211 0 19 chr10 133843317 133843369 -6473396 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1964 163 42 6 chr10 133844083 133844440 -6472325 - MLT1B LTR MaLR -1 389 20 1043 289 104 45 chr10 133844605 133844880 -6471885 - L1ME3 LINE L1 -211 5951 5694 3055 121 73 32 chr10 133844880 133845386 -6471379 - MER1A DNA MER1_type 0 527 1 1043 289 104 45 chr10 133845386 133846132 -6470633 - L1ME3 LINE L1 -468 5694 4845 2433 104 0 0 chr10 133846132 133846440 -6470325 + AluSx SINE Alu 1 308 -4 1043 289 104 45 chr10 133846440 133846605 -6470160 - L1ME3 LINE L1 -1317 4845 4691 754 200 0 0 chr10 133846627 133846762 -6470003 - FLAM_A SINE Alu -1 141 7 21 0 0 0 chr10 133848055 133848076 -6468689 + AT_rich Low_complexity Low_complexity 1 21 0 183 368 31 31 chr10 133849867 133850030 -6466735 + L2 LINE L2 3106 3268 -45 204 97 0 0 chr10 133850540 133850571 -6466194 + (CAG)n Simple_repeat Simple_repeat 3 33 0 184 305 17 0 chr10 133851890 133851949 -6464816 + MIR SINE MIR 93 152 -110 1301 156 71 212 chr10 133851978 133852544 -6464221 + MLT1E2 LTR MaLR 16 622 -4 1239 189 52 8 chr10 133854699 133854948 -6461817 - MER58B DNA MER1_type -3 338 79 869 175 34 6 chr10 133854964 133855141 -6461624 - MER5A DNA MER1_type -7 182 1 364 264 68 61 chr10 133855231 133855394 -6461371 + Charlie8 DNA MER1_type 56 219 -2198 275 219 41 27 chr10 133855462 133855535 -6461230 + Charlie8 DNA MER1_type 2344 2417 0 1768 129 7 11 chr10 133855596 133855867 -6460898 - AluSx SINE Alu -3 309 40 291 122 0 0 chr10 133856976 133857025 -6459740 + (TG)n Simple_repeat Simple_repeat 2 50 0 321 247 155 17 chr10 133857282 133857456 -6459309 + MIR SINE MIR 48 245 -17 330 26 0 0 chr10 133857621 133857660 -6459105 + (CA)n Simple_repeat Simple_repeat 2 40 0 420 91 0 0 chr10 133858412 133858478 -6458287 + (CA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 133858632 133858653 -6458112 + AT_rich Low_complexity Low_complexity 1 21 0 1634 180 54 4 chr10 133858676 133858954 -6457811 - AluJo SINE Alu -20 292 1 363 330 153 30 chr10 133859010 133859474 -6457291 - L3 LINE CR1 -335 1242 722 872 259 48 17 chr10 133859494 133859783 -6456982 + L1ME LINE L1 5474 5771 -350 1742 149 0 25 chr10 133859799 133860081 -6456684 + AluJo SINE Alu 20 294 -18 318 280 75 32 chr10 133860677 133860863 -6455902 + L1MEc LINE L1 790 983 -5413 1100 114 9 57 chr10 133864320 133864531 -6452234 - AluSp SINE Alu -15 298 98 1191 254 70 23 chr10 133864986 133865368 -6451397 + L1ME3A LINE L1 5658 6069 -101 568 72 12 0 chr10 133865368 133865451 -6451314 - L1PA13 LINE L1 -3 6160 6077 1191 254 70 23 chr10 133865451 133865552 -6451213 + L1ME3A LINE L1 6069 6164 -6 296 289 35 0 chr10 133866383 133866497 -6450268 + L1MC4 LINE L1 7924 8041 -1 2047 109 56 0 chr10 133867453 133867756 -6449009 + L1PA11 LINE L1 5852 6171 -3 908 276 148 33 chr10 133868624 133869659 -6447106 - L1MEc LINE L1 -4128 2268 1115 449 196 64 136 chr10 133869835 133870115 -6446650 - MER113 DNA MER1_type? -257 264 5 9771 36 7 3 chr10 133870971 133872164 -6444601 - L1P LINE L1 -813 5333 4137 565 304 20 5 chr10 133872474 133872678 -6444087 - MIR SINE MIR -48 214 8 1430 266 117 48 chr10 133873122 133873667 -6443098 - MLT1E LTR MaLR 0 593 11 182 301 14 27 chr10 133874063 133874136 -6442629 + L2 LINE L2 3179 3250 -63 387 235 98 8 chr10 133874238 133874370 -6442395 + MER113 DNA MER1_type? 275 418 -103 3509 217 59 58 chr10 133875919 133877322 -6439443 + L1MA7 LINE L1 750 2150 -4200 2739 89 3 21 chr10 133877322 133877704 -6439061 - THE1C LTR MaLR 0 375 1 3509 217 59 58 chr10 133877704 133877781 -6438984 + L1MA7 LINE L1 2150 3818 -2532 2541 275 31 24 chr10 133877939 133878637 -6438128 - L1M3b LINE L1 -5577 704 2 212 301 65 32 chr10 133879790 133879883 -6436882 - MIR SINE MIR -113 149 54 1236 93 33 6 chr10 133880715 133880898 -6435867 + AluY SINE Alu 119 306 -5 3989 153 9 7 chr10 133880899 133881583 -6435182 + L1MA7 LINE L1 3901 4585 -1765 2323 114 57 23 chr10 133881583 133881935 -6434830 - THE1B LTR MaLR 0 364 1 13359 72 1 2 chr10 133881935 133883516 -6433249 - THE1B-int LTR MaLR 0 1580 1 1807 116 7 33 chr10 133883516 133883791 -6432974 - THE1B LTR MaLR 0 364 97 5436 167 26 20 chr10 133883911 133885446 -6431319 + L1MA7 LINE L1 4949 6495 0 358 186 169 42 chr10 133886099 133886217 -6430548 + MLT1H LTR MaLR 379 511 -38 447 279 95 89 chr10 133886222 133886927 -6429838 + L1M4 LINE L1 3687 4395 -1751 262 259 52 9 chr10 133886997 133887113 -6429652 + L1M4 LINE L1 5228 5348 -798 2685 115 13 11 chr10 133887815 133888189 -6428576 - THE1C LTR MaLR 0 375 1 285 252 76 8 chr10 133888563 133888682 -6428083 + L1 LINE L1 4924 5050 -1096 1937 257 59 32 chr10 133888754 133889670 -6427095 + L1MEc LINE L1 2033 2943 -3272 306 289 26 0 chr10 133890142 133890218 -6426547 - L2 LINE L2 -2 3270 3193 334 313 40 0 chr10 133890222 133890352 -6426413 - MIR SINE MIR -63 145 5 2205 105 14 0 chr10 133890444 133890740 -6426025 - AluSx SINE Alu -12 300 1 1252 161 18 36 chr10 133891785 133892008 -6424757 + MER20 DNA MER1_type 1 219 0 227 211 0 18 chr10 133894690 133894747 -6422018 + L1ME2 LINE L1 2001 2056 -4340 928 208 46 15 chr10 133894752 133894949 -6421816 + MER105 DNA DNA 1 203 -1 302 113 0 19 chr10 133895081 133895134 -6421631 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 682 226 48 48 chr10 133895135 133895387 -6421378 + L1ME2 LINE L1 2159 2410 -3986 2804 200 81 76 chr10 133895404 133896443 -6420322 + L1ME2 LINE L1 5201 6385 -18 290 243 56 49 chr10 133896593 133896737 -6420028 - L1M4 LINE L1 -3729 2417 2273 546 115 0 0 chr10 133897126 133897204 -6419561 - AluJo SINE Alu -2 310 233 875 170 13 38 chr10 133897204 133897363 -6419402 - AluJo SINE Alu -157 155 1 380 214 0 0 chr10 133897625 133897695 -6419070 - L2 LINE L2 0 3313 3244 319 330 10 0 chr10 133899179 133899276 -6417489 - L2 LINE L2 -498 2816 2719 239 352 23 0 chr10 133900119 133900207 -6416558 + L2 LINE L2 3134 3223 -49 315 164 0 0 chr10 133900278 133900339 -6416426 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 1117 249 134 24 chr10 133900512 133900937 -6415828 + MLT1F LTR MaLR 1 540 -53 2283 233 103 39 chr10 133901799 133902520 -6414245 - MER21B LTR ERV1 -85 778 12 396 169 78 0 chr10 133902707 133902784 -6413981 - MER53 DNA DNA -6 183 101 468 99 0 0 chr10 133902787 133902858 -6413907 + (TG)n Simple_repeat Simple_repeat 2 72 0 229 298 98 80 chr10 133903426 133903760 -6413005 + L2 LINE L2 1860 2208 -1106 2156 117 3 0 chr10 133903760 133904058 -6412707 - AluSx SINE Alu -13 299 1 229 298 98 80 chr10 133904058 133904236 -6412529 + L2 LINE L2 2208 2381 -933 719 156 9 0 chr10 133904594 133904703 -6412062 - AluSc SINE Alu -26 283 174 1186 169 53 4 chr10 133904805 133905030 -6411735 + L1MC3 LINE L1 6633 6868 -917 492 269 0 6 chr10 133905055 133905422 -6411343 + (CA)n Simple_repeat Simple_repeat 1 364 0 3723 211 60 14 chr10 133905438 133905563 -6411202 + L1MC3 LINE L1 6872 6990 -795 2785 105 6 3 chr10 133905563 133905926 -6410839 - THE1B LTR MaLR 0 364 1 3723 211 60 14 chr10 133905926 133906674 -6410091 + L1MC3 LINE L1 6990 7785 0 549 173 129 43 chr10 133906822 133906961 -6409804 + MER106B DNA MER1_type 1 151 -908 522 234 14 0 chr10 133907643 133907784 -6408981 + L1MC3 LINE L1 7643 7785 0 182 375 57 0 chr10 133907826 133907914 -6408851 + L2 LINE L2 3155 3247 -25 1177 248 90 3 chr10 133908824 133909135 -6407630 + MER58B DNA MER1_type 2 339 -2 579 182 83 61 chr10 133909215 133909396 -6407369 + MER20 DNA MER1_type 1 185 -34 249 321 80 7 chr10 133909499 133909636 -6407129 - MIR3 SINE MIR -58 150 4 399 334 101 19 chr10 133911895 133912260 -6404505 - L2 LINE L2 -1199 2115 1721 191 301 14 91 chr10 133912647 133912790 -6403975 - MIR SINE MIR -46 216 85 426 203 85 102 chr10 133912981 133913158 -6403607 + MER5B DNA MER1_type 2 175 -3 233 339 112 40 chr10 133913288 133913539 -6403226 + L2 LINE L2 2490 2758 -556 534 188 42 28 chr10 133913577 133913721 -6403044 + L2 LINE L2 2916 3061 -252 676 170 27 0 chr10 133914301 133914413 -6402352 + FLAM_C SINE Alu 2 116 -27 24 0 0 0 chr10 133914443 133914467 -6402298 + AT_rich Low_complexity Low_complexity 1 24 0 399 281 198 37 chr10 133914733 133915107 -6401658 + L2 LINE L2 2871 3304 -9 742 166 47 72 chr10 133915903 133916096 -6400669 - MER53 DNA DNA -1 188 1 22 70 0 0 chr10 133916747 133916790 -6399975 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 133921116 133921145 -6395620 + AT_rich Low_complexity Low_complexity 1 29 0 2748 179 51 4 chr10 133922565 133923117 -6393648 + L1MC3 LINE L1 7200 7777 -8 235 384 13 7 chr10 133923706 133923857 -6392908 + MIR SINE MIR 55 206 -56 1047 218 72 57 chr10 133923868 133924217 -6392548 - MLT2B3 LTR ERVL 0 554 201 1298 189 14 89 chr10 133924222 133924571 -6392194 - MLT2B3 LTR ERVL -231 323 1 430 224 41 27 chr10 133924622 133924769 -6391996 + L1ME4a LINE L1 5973 6121 0 2854 3 0 0 chr10 133925086 133925391 -6391374 - AluYa5 SINE Alu -6 305 1 192 295 145 67 chr10 133925897 133926256 -6390509 + L2 LINE L2 2059 2445 -869 583 300 80 61 chr10 133926474 133926687 -6390078 - L2 LINE L2 -359 2955 2732 2273 115 0 3 chr10 133926687 133926992 -6389773 - AluSc SINE Alu -5 304 1 583 300 80 61 chr10 133926992 133927105 -6389660 - L2 LINE L2 -582 2732 2623 678 276 92 17 chr10 133927153 133927392 -6389373 - MIR SINE MIR -1 261 5 595 287 80 80 chr10 133927451 133927560 -6389205 + L2 LINE L2 2831 2939 -374 2259 82 10 10 chr10 133927560 133927854 -6388911 - AluSg1 SINE Alu -15 294 1 595 287 80 80 chr10 133927854 133928169 -6388596 + L2 LINE L2 2938 3255 -58 5765 47 34 6 chr10 133929890 133930573 -6386192 - L1PA5 LINE L1 0 6154 5453 10411 51 2 0 chr10 133930711 133931994 -6384771 - L1PA5 LINE L1 -3263 2883 1598 288 243 104 29 chr10 133932060 133932233 -6384532 - L1MC/D LINE L1 -721 5443 5255 911 168 34 17 chr10 133933195 133933374 -6383391 + MER53 DNA DNA 8 189 0 548 25 112 6 chr10 133985156 133985317 -6331448 + (TA)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr10 133985317 133985345 -6331420 + AT_rich Low_complexity Low_complexity 1 28 0 312 315 57 72 chr10 133985345 133985748 -6331017 - L1ME4a LINE L1 -13 6108 5712 327 291 73 64 chr10 133985450 133985670 -6331095 + L1MC5 LINE L1 7517 7738 -223 352 9 133 0 chr10 133985749 133985854 -6330911 + (TA)n Simple_repeat Simple_repeat 1 119 0 207 0 0 0 chr10 133985857 133985880 -6330885 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 331 176 21 chr10 133986514 133986656 -6330109 + MIR SINE MIR 27 190 -72 438 331 55 57 chr10 133986715 133987135 -6329630 - L2 LINE L2 -12 3260 2842 322 293 223 45 chr10 133987187 133987541 -6329224 - L2 LINE L2 -727 2587 2297 2191 126 132 8 chr10 133987541 133987921 -6328844 - MSTA LTR MaLR 0 428 2 322 293 223 45 chr10 133987921 133988457 -6328308 - L2 LINE L2 -1017 2297 1538 1531 238 77 13 chr10 133988537 133989120 -6327645 - MLT1E3 LTR MaLR -5 619 5 192 258 73 79 chr10 133989457 133989635 -6327130 - L2 LINE L2 -2741 573 397 225 69 0 0 chr10 133989912 133989941 -6326824 + Alu SINE Alu 86 114 -188 2175 90 0 7 chr10 133989941 133990231 -6326534 - AluSc SINE Alu -21 288 1 441 36 0 0 chr10 133990312 133990368 -6326397 - AluY SINE Alu -15 296 241 4972 187 20 36 chr10 133990368 133991520 -6325245 + L1MD1 LINE L1 4771 5940 -302 2151 83 13 7 chr10 133991520 133991822 -6324943 - AluSx SINE Alu -8 304 1 4972 187 20 36 chr10 133991822 133992087 -6324678 + L1MD1 LINE L1 5940 6168 -74 1985 138 0 0 chr10 133992087 133992376 -6324389 - AluSx SINE Alu -23 289 1 4972 187 20 36 chr10 133992376 133992449 -6324316 + L1MD1 LINE L1 6168 6241 -1 538 146 30 21 chr10 133992518 133992649 -6324116 + L1M1 LINE L1 3463 3605 -3960 353 280 158 22 chr10 133992650 133992857 -6323908 + MIR SINE MIR 29 262 0 393 275 92 0 chr10 133993740 133993849 -6322916 + L2 LINE L2 3194 3312 -1 474 259 44 7 chr10 133994325 133994460 -6322305 + MIR SINE MIR 77 216 -46 1248 275 51 10 chr10 133994460 133994973 -6321792 + L1ME3 LINE L1 4869 5402 -744 886 190 0 0 chr10 133994990 133995132 -6321633 + Tigger3(Golem) DNA MER2_type 1 142 -2887 * 1563 156 12 4 chr10 133995129 133995385 -6321380 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 2067 232 40 71 chr10 133995394 133996115 -6320650 + L1ME3 LINE L1 5461 6159 -3 1970 111 0 21 chr10 133996957 133997302 -6319463 + AluSx SINE Alu 1 339 0 2249 78 3 0 chr10 133998731 133999027 -6317738 + AluY SINE Alu 1 297 -14 327 370 20 0 chr10 133999161 133999307 -6317458 - L1ME3 LINE L1 -215 5947 5799 491 281 105 62 chr10 133999664 134000195 -6316570 + L2 LINE L2 2543 3091 -181 321 252 81 8 chr10 134000310 134000433 -6316332 + L2 LINE L2 3137 3268 -4 1230 235 50 0 chr10 134002198 134002479 -6314286 - MER58B DNA MER1_type -1 340 46 443 182 52 0 chr10 134004566 134004643 -6312122 - MER63 DNA MER1_type -76 760 680 246 291 68 26 chr10 134005000 134005117 -6311648 + MIR SINE MIR 105 226 -36 812 166 33 17 chr10 134005443 134005624 -6311141 - MER20 DNA MER1_type 0 219 36 548 36 112 3 chr10 134006364 134006667 -6310098 + (TA)n Simple_repeat Simple_repeat 1 336 0 207 0 0 0 chr10 134006670 134006693 -6310072 + (CA)n Simple_repeat Simple_repeat 2 24 0 444 93 0 40 chr10 134007111 134007186 -6309579 + L1PB3 LINE L1 6082 6153 -1 189 175 0 0 chr10 134008354 134008394 -6308371 + (CA)n Simple_repeat Simple_repeat 2 41 0 2098 103 3 0 chr10 134010593 134010875 -6305890 + AluSp SINE Alu 1 283 -30 409 280 80 11 chr10 134011439 134011614 -6305151 - MER5A DNA MER1_type 0 189 3 291 54 0 0 chr10 134011840 134011877 -6304888 + (TG)n Simple_repeat Simple_repeat 1 37 0 2513 56 0 0 chr10 134011996 134012298 -6304467 + AluY SINE Alu 1 302 -9 528 282 39 6 chr10 134012582 134012738 -6304027 + MER5B DNA MER1_type 1 161 -17 303 49 0 0 chr10 134013071 134013112 -6303653 + (GA)n Simple_repeat Simple_repeat 1 41 0 382 250 24 57 chr10 134013134 134013258 -6303507 + MER5A DNA MER1_type 50 169 -20 270 266 28 64 chr10 134013295 134013404 -6303361 + MER5A DNA MER1_type 65 169 -20 285 257 28 64 chr10 134013441 134013550 -6303215 + MER5A DNA MER1_type 65 169 -20 218 159 45 23 chr10 134014528 134014572 -6302193 - L2 LINE L2 -7 3306 3262 2048 132 27 57 chr10 134014772 134015174 -6301591 - MLT1B LTR MaLR 0 390 1 1018 188 34 10 chr10 134016271 134016478 -6300287 - L1MB3 LINE L1 -2 6181 5970 383 272 67 56 chr10 134016498 134016678 -6300087 + L1ME4a LINE L1 5753 5934 -187 180 77 0 0 chr10 134017183 134017209 -6299556 + (GA)n Simple_repeat Simple_repeat 1 26 0 953 70 7 0 chr10 134017210 134017353 -6299412 + (TG)n Simple_repeat Simple_repeat 2 145 0 351 308 116 14 chr10 134018157 134018303 -6298462 + MIR SINE MIR 75 235 -27 3375 171 29 0 chr10 134020017 134020602 -6296163 + MER7C DNA MER2_type 1 602 0 199 273 93 87 chr10 134020978 134021128 -6295637 + MIR SINE MIR 4 154 -108 494 311 97 25 chr10 134021291 134021529 -6295236 + MIR SINE MIR 2 256 -6 1363 177 20 18 chr10 134021596 134022057 -6294708 - MLT1D LTR MaLR -1 504 1 267 273 146 0 chr10 134022394 134022504 -6294261 + LTR16A1 LTR ERVL 1 126 -331 2192 117 0 0 chr10 134022551 134022851 -6293914 + AluSc SINE Alu 1 300 -9 516 211 139 48 chr10 134022859 134023068 -6293697 + LTR16A1 LTR ERVL 230 457 0 595 230 45 56 chr10 134023097 134023275 -6293490 + MER5A DNA MER1_type 1 176 -13 1252 246 59 41 chr10 134025539 134025982 -6290783 - MLT1C LTR MaLR -9 458 8 2169 111 3 0 chr10 134026908 134027215 -6289550 + AluSp SINE Alu 1 308 -5 497 335 46 0 chr10 134027485 134027679 -6289086 - MIR SINE MIR -1 261 59 348 335 67 29 chr10 134027724 134027963 -6288802 + MIR SINE MIR 13 260 -2 244 406 0 0 chr10 134028294 134028422 -6288343 - L2 LINE L2 -11 3261 3134 2508 161 63 10 chr10 134028485 134028989 -6287776 - L1MB3 LINE L1 0 6183 5653 195 287 40 50 chr10 134029591 134029692 -6287073 + MIR3 SINE MIR 91 190 -18 351 0 0 0 chr10 134030945 134030984 -6285781 + (CA)n Simple_repeat Simple_repeat 2 40 0 2515 70 0 0 chr10 134031167 134031465 -6285300 - AluY SINE Alu -13 298 1 4551 165 32 10 chr10 134031471 134032340 -6284425 - L1MB7 LINE L1 0 6184 5297 692 300 25 8 chr10 134032491 134032734 -6284031 + MIR SINE MIR 16 262 0 411 284 9 26 chr10 134032728 134032844 -6283921 - L2 LINE L2 -1 3312 3199 * 185 282 82 0 chr10 134033538 134033623 -6283142 + MIR SINE MIR 61 152 -110 809 283 70 59 chr10 134033862 134034775 -6281990 + L1ME3A LINE L1 4724 5651 -519 453 254 61 6 chr10 134034775 134034940 -6281825 - MER104 DNA MER2_type -2 178 5 809 283 70 59 chr10 134034940 134035147 -6281618 + L1ME3A LINE L1 5651 5854 -316 593 242 137 22 chr10 134035150 134035551 -6281214 + L1M4 LINE L1 3095 3541 -2605 191 36 36 0 chr10 134035748 134035776 -6280989 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 302 217 6 140 chr10 134035791 134035813 -6280952 + L1M4 LINE L1 3684 3707 -2439 2430 96 3 0 chr10 134035813 134036125 -6280640 + AluSq SINE Alu 1 313 0 302 217 6 140 chr10 134036125 134036157 -6280608 + L1M4 LINE L1 3707 3742 -2404 1007 180 27 40 chr10 134036157 134036379 -6280386 + MER20 DNA MER1_type 1 219 0 302 217 6 140 chr10 134036379 134036480 -6280285 + L1M4 LINE L1 3742 3819 -2327 * 1479 251 24 2 chr10 134036457 134036883 -6279882 + L1M4 LINE L1 4891 5325 -821 2499 43 0 20 chr10 134037477 134037779 -6278986 + AluY SINE Alu 1 296 -15 216 0 0 0 chr10 134038523 134038547 -6278218 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2984 100 47 13 chr10 134040631 134040882 -6275883 + MER41A LTR ERV1 1 275 -279 4176 85 18 0 chr10 134040882 134041426 -6275339 - MER41A LTR ERV1 0 554 1 2984 100 47 13 chr10 134041426 134041625 -6275140 + MER41A LTR ERV1 275 466 -88 2066 163 66 51 chr10 134041625 134042078 -6274687 - LTR2B LTR ERV1 0 490 31 533 152 54 0 chr10 134042091 134042183 -6274582 + MER41B LTR ERV1 539 635 0 182 273 61 30 chr10 134042349 134042415 -6274350 + L2 LINE L2 3190 3257 -15 300 256 94 31 chr10 134042893 134043053 -6273712 + L1M LINE L1 5256 5425 -2383 763 265 38 52 chr10 134043057 134043423 -6273342 + L1ME3A LINE L1 3665 4025 -2121 322 174 290 0 chr10 134043425 134043494 -6273271 + 5S rRNA rRNA 2 90 -31 6045 151 19 68 chr10 134043498 134045905 -6270860 + L1MA5A LINE L1 4016 6297 0 2382 258 81 13 chr10 134045902 134047493 -6269272 + L1ME3A LINE L1 4245 5946 -224 * 586 203 120 6 chr10 134047518 134047676 -6269089 + L1ME3A LINE L1 5990 6165 -5 252 86 0 0 chr10 134047867 134047902 -6268863 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1768 123 0 0 chr10 134047917 134048152 -6268613 - AluSq SINE Alu -78 235 1 401 280 34 8 chr10 134048393 134048511 -6268254 - MIR SINE MIR -15 247 127 2392 78 7 0 chr10 134048985 134049279 -6267486 + AluY SINE Alu 1 296 -15 377 219 20 7 chr10 134049330 134049476 -6267289 + (TG)n Simple_repeat Simple_repeat 2 149 0 370 309 43 22 chr10 134050319 134050458 -6266307 + LTR67 LTR ERVL 37 178 -379 970 177 23 50 chr10 134051562 134051782 -6264983 - MER20 DNA MER1_type -5 214 1 1745 178 0 14 chr10 134052446 134052739 -6264026 + AluJo SINE Alu 2 290 -22 444 294 4 0 chr10 134052798 134053076 -6263689 + (TCTG)n Simple_repeat Simple_repeat 1 279 0 504 223 12 17 chr10 134053812 134054232 -6262533 + GA-rich Low_complexity Low_complexity 1 418 0 289 221 0 76 chr10 134054413 134054576 -6262189 + MER5A DNA MER1_type 1 189 0 1662 220 19 16 chr10 134055895 134056268 -6260497 - MLT1A2 LTR MaLR 0 374 1 10877 201 21 32 chr10 134056519 134057225 -6259540 + L1PA11 LINE L1 445 1157 -6427 195 69 0 0 chr10 134057225 134057254 -6259511 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10877 201 21 32 chr10 134057254 134059407 -6257358 + L1PA11 LINE L1 1157 4537 -3047 13632 131 31 12 chr10 134059414 134062321 -6254444 + L1PA11 LINE L1 4686 7612 0 189 0 0 0 chr10 134062720 134062741 -6254024 + (T)n Simple_repeat Simple_repeat 1 21 0 259 264 11 77 chr10 134062746 134062837 -6253928 + L1ME4a LINE L1 5817 5901 -1907 370 224 24 0 chr10 134062931 134063016 -6253749 + L1ME4a LINE L1 5947 6033 -88 492 297 131 27 chr10 134063072 134063614 -6253151 - L2 LINE L2 -7 3306 2688 780 227 27 0 chr10 134064525 134064710 -6252055 + L1MC3 LINE L1 4942 5131 -1015 1269 175 0 22 chr10 134064712 134064940 -6251825 + AluJb SINE Alu 82 304 -8 2058 196 50 39 chr10 134064941 134065085 -6251680 + L1MC3 LINE L1 5138 5279 -887 2486 139 0 0 chr10 134065085 134065451 -6251314 - MER47A DNA MER2_type 0 366 1 2058 196 50 39 chr10 134065451 134065946 -6250819 + L1MC3 LINE L1 5279 5705 -461 378 347 199 5 chr10 134065953 134066354 -6250411 - L2 LINE L2 -349 2965 2487 713 233 263 22 chr10 134066360 134066725 -6250040 - L3 LINE CR1 -754 823 371 2236 45 0 56 chr10 134067797 134068085 -6248680 - AluY SINE Alu -10 301 30 397 328 24 0 chr10 134068695 134068820 -6247945 + (CGTG)n Simple_repeat Simple_repeat 4 131 0 242 148 19 0 chr10 134069322 134069376 -6247389 + (TG)n Simple_repeat Simple_repeat 2 56 0 2454 224 38 29 chr10 134069430 134070087 -6246678 + L1MA9 LINE L1 5620 6282 -30 454 203 6 123 chr10 134071297 134071460 -6245305 + MER104 DNA Tc2 37 180 0 316 192 20 0 chr10 134071555 134071654 -6245111 + GA-rich Low_complexity Low_complexity 1 101 0 2695 81 21 13 chr10 134071750 134072122 -6244643 - THE1C LTR MaLR 0 375 1 615 286 6 0 chr10 134072158 134072340 -6244425 + MIR SINE MIR 45 227 -35 501 17 0 0 chr10 134074483 134074541 -6242224 + (CATA)n Simple_repeat Simple_repeat 2 59 0 3207 221 79 15 chr10 134075635 134076484 -6240281 + Charlie1a DNA MER1_type 73 975 -480 1425 152 17 106 chr10 134076485 134076745 -6240020 + L1MB3 LINE L1 5866 6089 -94 1978 137 0 10 chr10 134076745 134077038 -6239727 - AluJo SINE Alu -22 290 1 1425 152 17 106 chr10 134077038 134077126 -6239639 + L1MB3 LINE L1 6089 6183 0 2317 179 28 18 chr10 134077132 134077625 -6239140 + Charlie1a DNA MER1_type 958 1455 0 414 309 138 0 chr10 134077632 134077747 -6239018 + MIR SINE MIR 57 155 -107 2397 98 0 0 chr10 134077747 134078043 -6238722 + AluSq SINE Alu 1 296 -17 414 309 138 0 chr10 134078043 134078108 -6238657 + MIR SINE MIR 155 262 0 188 250 42 0 chr10 134078429 134078501 -6238264 - L2 LINE L2 -530 2784 2710 382 256 99 6 chr10 134078726 134078898 -6237867 + LTR33 LTR ERVL 34 221 -300 293 292 10 10 chr10 134079034 134079130 -6237635 + LTR33 LTR ERVL 423 518 -3 273 373 9 0 chr10 134079168 134079278 -6237487 + L2 LINE L2 3203 3313 0 3527 181 27 23 chr10 134079588 134080284 -6236481 - L1MB7 LINE L1 0 6184 5486 972 155 0 115 chr10 134080536 134080665 -6236100 - MER3 DNA MER1_type -5 204 110 2210 125 0 0 chr10 134080665 134080962 -6235803 + AluSx SINE Alu 1 297 -15 972 155 0 115 chr10 134080962 134081058 -6235707 - MER3 DNA MER1_type -99 110 5 21 0 0 0 chr10 134081661 134081682 -6235083 + AT_rich Low_complexity Low_complexity 1 21 0 1585 150 3 69 chr10 134081838 134082172 -6234593 - AluJo SINE Alu 0 312 1 228 221 147 15 chr10 134082871 134082939 -6233826 - MIR SINE MIR -113 149 73 324 271 63 45 chr10 134083676 134083939 -6232826 - MLT1H LTR MaLR -224 325 19 688 188 27 65 chr10 134086751 134086937 -6229828 - MER104 DNA MER2_type 0 180 2 294 364 80 24 chr10 134087010 134087260 -6229505 - L3 LINE CR1 -119 1458 1195 378 277 145 47 chr10 134087260 134087495 -6229270 - L1ME3A LINE L1 -7 6163 5906 1356 58 6 0 chr10 134087518 134087689 -6229076 + L1PA13 LINE L1 5708 5879 -284 1253 278 91 53 chr10 134087715 134088253 -6228512 - L1ME3A LINE L1 -260 5904 5320 1574 176 33 13 chr10 134088253 134088554 -6228211 - AluJb SINE Alu 0 312 6 1253 278 91 53 chr10 134088554 134088914 -6227851 - L1ME3A LINE L1 -844 5320 4975 285 130 0 0 chr10 134089017 134089063 -6227702 - L1ME3A LINE L1 -1354 4792 4747 22 0 0 0 chr10 134089076 134089098 -6227667 + AT_rich Low_complexity Low_complexity 1 22 0 308 276 47 19 chr10 134089545 134089759 -6227006 - L1ME4a LINE L1 -210 5911 5692 189 324 15 0 chr10 134090086 134090154 -6226611 + L2 LINE L2 3244 3312 -1 192 236 45 136 chr10 134090746 134090856 -6225909 + L2 LINE L2 3213 3312 -1 832 231 38 9 chr10 134091045 134091257 -6225508 + MER20 DNA MER1_type 1 218 -1 666 305 180 18 chr10 134091759 134092185 -6224580 + L2 LINE L2 2687 3220 -93 2099 123 3 0 chr10 134092185 134092485 -6224280 + AluSx SINE Alu 1 301 -11 666 305 180 18 chr10 134092485 134092595 -6224170 + L2 LINE L2 3220 3311 -2 2017 125 0 0 chr10 134092689 134092978 -6223787 + AluSg SINE Alu 1 289 -21 264 242 212 0 chr10 134093083 134093182 -6223583 - LTR67 LTR ERVL -28 529 410 1988 116 20 0 chr10 134094456 134094585 -6222180 + AluSx SINE Alu 1 126 -186 189 0 0 0 chr10 134094585 134094606 -6222159 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1988 116 20 0 chr10 134094606 134094770 -6221995 + AluSx SINE Alu 126 300 -12 2052 131 3 3 chr10 134095613 134095925 -6220840 - AluSx SINE Alu 0 312 1 561 242 17 0 chr10 134096392 134096512 -6220253 - FLAM_A SINE Alu -11 122 1 237 288 288 0 chr10 134096739 134096864 -6219901 + MIR3 SINE MIR 33 193 -15 366 129 0 0 chr10 134096978 134097040 -6219725 + (TGGA)n Simple_repeat Simple_repeat 4 65 0 249 316 51 20 chr10 134099316 134099414 -6217351 + MIR SINE MIR 91 191 -71 185 276 40 0 chr10 134099418 134099494 -6217271 + L2 LINE L2 2453 2531 -783 314 299 0 73 chr10 134099617 134099754 -6217011 + MER69 DNA AcHobo 49 2524 -2 461 326 127 45 chr10 134099869 134100271 -6216494 + L2 LINE L2 2817 3251 -21 395 250 26 46 chr10 134101238 134101390 -6215375 + MLT1H LTR MaLR 1 149 -400 350 240 139 31 chr10 134101473 134101648 -6215117 + MLT1H LTR MaLR 359 592 -3 3974 174 26 18 chr10 134102514 134103276 -6213489 + L1MB1 LINE L1 5401 6168 0 402 280 73 12 chr10 134103288 134103457 -6213308 - MIR SINE MIR -49 213 34 207 280 182 30 chr10 134106018 134106150 -6210615 - L2 LINE L2 -3 3310 3159 258 311 253 11 chr10 134106346 134106725 -6210040 - L2 LINE L2 -448 2866 2396 1067 208 68 7 chr10 134107205 134107606 -6209159 + LTR53 LTR ERVL 3 519 0 180 273 55 0 chr10 134107765 134107820 -6208945 - MER5A DNA MER1_type -71 118 61 2421 57 0 0 chr10 134110878 134111176 -6205589 + AluY SINE Alu 1 298 -13 305 268 46 99 chr10 134111260 134111562 -6205203 + L2 LINE L2 2148 2433 -881 358 311 12 107 chr10 134111814 134112058 -6204707 + L3 LINE CR1 1355 1575 -2 823 206 221 68 chr10 134112599 134112997 -6203768 + MER31B LTR ERV1 8 466 0 2539 21 0 0 chr10 134113612 134113902 -6202863 + L1PA2 LINE L1 5866 6155 0 1742 162 30 0 chr10 134113912 134114031 -6202734 + AluJo SINE Alu 1 115 -197 252 0 0 0 chr10 134114031 134114059 -6202706 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1742 162 30 0 chr10 134114059 134114236 -6202529 + AluJo SINE Alu 115 306 -6 200 167 0 37 chr10 134114406 134114460 -6202305 + (CATA)n Simple_repeat Simple_repeat 3 54 0 22 0 0 0 chr10 134114503 134114525 -6202240 + AT_rich Low_complexity Low_complexity 1 22 0 187 304 51 13 chr10 134115625 134115704 -6201061 - L2 LINE L2 -7 3265 3184 2323 51 0 7 chr10 134116509 134116802 -6199963 - AluY SINE Alu -20 291 1 294 285 181 14 chr10 134117265 134117409 -6199356 + MIR SINE MIR 83 250 -12 307 221 49 98 chr10 134118624 134118746 -6198019 + L1MC4 LINE L1 6563 6678 -1364 2270 84 0 0 chr10 134118804 134119102 -6197663 + AluY SINE Alu 1 298 -13 867 55 0 0 chr10 134119115 134119225 -6197540 + L1PA5 LINE L1 6045 6154 0 247 200 225 8 chr10 134120052 134120172 -6196593 - MIR SINE MIR -115 147 2 2306 173 70 18 chr10 134121352 134121585 -6195180 + MLT1C LTR MaLR 1 220 -247 2443 96 61 0 chr10 134121585 134121928 -6194837 - THE1B LTR MaLR 0 364 1 2306 173 70 18 chr10 134121928 134122138 -6194627 + MLT1C LTR MaLR 220 467 0 374 311 95 31 chr10 134122141 134122363 -6194402 - MIR SINE MIR -24 238 3 405 276 100 64 chr10 134123464 134123945 -6192820 + L1ME LINE L1 4175 4684 -1462 1717 174 0 26 chr10 134123945 134124256 -6192509 + AluJb SINE Alu 1 303 -9 405 276 100 64 chr10 134124256 134124396 -6192369 + L1ME LINE L1 4684 4818 -1328 418 325 180 14 chr10 134124504 134124911 -6191854 + L1ME LINE L1 4960 5431 -739 4062 188 46 25 chr10 134124948 134125789 -6190976 + L1MB5 LINE L1 5173 6037 -137 2207 112 0 0 chr10 134125789 134126092 -6190673 + AluSx SINE Alu 1 303 -9 4062 188 46 25 chr10 134126092 134126232 -6190533 + L1MB5 LINE L1 6037 6173 -1 415 265 90 73 chr10 134126222 134126484 -6190281 + L1ME LINE L1 5421 5691 -472 * 655 261 27 16 chr10 134126817 134127005 -6189760 + MIR SINE MIR 73 262 0 762 259 94 15 chr10 134127521 134127787 -6188978 - Charlie8 DNA MER1_type -2130 287 1 6118 208 61 46 chr10 134129493 134130413 -6186352 + L1MDa LINE L1 95 1000 -5540 1556 164 58 3 chr10 134130413 134130706 -6186059 + AluSx SINE Alu 3 311 -1 2339 62 13 0 chr10 134130706 134131012 -6185753 + AluY SINE Alu 1 310 -1 6118 208 61 46 chr10 134131012 134131691 -6185074 + L1MDa LINE L1 999 1719 -4821 360 259 0 15 chr10 134131687 134131822 -6184943 + L1M4 LINE L1 4566 4698 -1448 * 380 183 0 0 chr10 134131829 134131889 -6184876 + AluJ/FLAM SINE Alu 1 60 -242 711 164 8 0 chr10 134332052 134332180 -5984585 + AluSp/q SINE Alu 180 308 -5 643 295 40 5 chr10 134333035 134333235 -5983530 - MIR SINE MIR -43 219 13 314 143 16 0 chr10 134333786 134333849 -5982916 + (TG)n Simple_repeat Simple_repeat 2 65 0 376 198 19 28 chr10 134333940 134334046 -5982719 + MER112 DNA MER1_type 149 253 -7 263 224 140 28 chr10 134334862 134334969 -5981796 - L1ME4a LINE L1 -15 6106 5988 309 289 32 58 chr10 134335397 134335553 -5981212 - L1ME4a LINE L1 -37 6084 5933 343 125 54 0 chr10 134335618 134335674 -5981091 - L1MB2 LINE L1 -36 6135 6077 320 217 0 0 chr10 134337757 134337817 -5978948 - MER3 DNA MER1_type -2 207 148 2190 72 0 0 chr10 134338244 134338523 -5978242 - AluSx SINE Alu -10 302 24 27 0 0 0 chr10 134341615 134341642 -5975123 + AT_rich Low_complexity Low_complexity 1 27 0 1839 118 3 70 chr10 134341652 134341967 -5974798 - AluSx SINE Alu -18 294 1 1584 126 48 20 chr10 134341976 134342269 -5974496 - L1MA8 LINE L1 -4 6287 5987 2203 106 0 0 chr10 134342269 134342571 -5974194 - AluSx SINE Alu -3 309 8 2004 97 27 30 chr10 134343141 134343441 -5973324 - AluSg SINE Alu -11 299 1 218 310 0 0 chr10 134343825 134343883 -5972882 + L2 LINE L2 3214 3271 -1 1256 102 11 0 chr10 134344045 134344222 -5972543 + AluSg/x SINE Alu 111 289 -21 2153 114 0 0 chr10 134346094 134346392 -5970373 + AluSx SINE Alu 1 298 -14 1722 168 0 0 chr10 134346628 134346920 -5969845 - AluJo SINE Alu -10 302 11 368 209 58 0 chr10 134348523 134348609 -5968156 + MER53 DNA DNA 1 91 -98 186 325 264 15 chr10 134348615 134348812 -5967953 - L3 LINE CR1 -63 1514 1269 235 244 0 0 chr10 134348823 134348868 -5967897 - MIR3 SINE MIR -11 197 153 293 383 8 0 chr10 134348871 134348991 -5967774 - MER5A DNA MER1_type -3 186 66 2018 139 3 0 chr10 134348994 134349304 -5967461 - AluSp SINE Alu -2 311 1 267 333 13 0 chr10 134349368 134349446 -5967319 - MIR3 SINE MIR -49 159 81 529 122 17 0 chr10 134350167 134350282 -5966483 + (CA)n Simple_repeat Simple_repeat 2 118 0 255 242 16 0 chr10 134352069 134352131 -5964634 + (TATG)n Simple_repeat Simple_repeat 1 63 0 2291 80 10 0 chr10 134352140 134352441 -5964324 + AluSq SINE Alu 5 308 -5 207 0 0 0 chr10 134352573 134352596 -5964169 + (T)n Simple_repeat Simple_repeat 1 23 0 2223 123 37 20 chr10 134353319 134353669 -5963096 - MSTA LTR MaLR 0 428 73 308 330 214 0 chr10 134353723 134353835 -5962930 - L2 LINE L2 0 3272 3137 258 241 17 0 chr10 134354722 134354780 -5961985 + L2 LINE L2 3209 3267 -5 2083 104 3 3 chr10 134355715 134356012 -5960753 - AluSg SINE Alu -13 297 1 1473 189 47 19 chr10 134357332 134357649 -5959116 - L1MC1 LINE L1 -1 6332 6007 852 171 72 0 chr10 134357894 134358046 -5958719 - AluJb SINE Alu -1 311 149 1604 165 33 0 chr10 134359716 134359989 -5956776 + AluSx SINE Alu 1 282 -30 1656 141 52 4 chr10 134360008 134360316 -5956449 + AluSg SINE Alu 1 321 0 212 224 0 52 chr10 134360438 134360496 -5956269 + MER5B DNA MER1_type 1 55 -123 1531 158 4 18 chr10 134360500 134360772 -5955993 + AluJb SINE Alu 1 268 -44 1797 174 0 0 chr10 134360936 134361240 -5955525 - AluJb SINE Alu -8 304 1 302 91 0 23 chr10 134361271 134361315 -5955450 - MER3 DNA MER1_type -164 45 3 306 213 0 67 chr10 134362952 134363027 -5953738 + MER3 DNA MER1_type 35 104 -105 * 798 220 10 72 chr10 134362973 134363027 -5953738 - MER3 DNA MER1_type -5 204 148 2227 74 0 0 chr10 134363027 134363311 -5953454 + AluSx SINE Alu 1 284 -28 798 220 10 72 chr10 134363311 134363465 -5953300 - MER3 DNA MER1_type -61 148 9 252 0 0 0 chr10 134363773 134363801 -5952964 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 240 263 0 0 chr10 134365296 134365353 -5951412 + (ATGGTG)n Simple_repeat Simple_repeat 6 62 0 523 291 36 46 chr10 134367714 134367910 -5948855 - MER91A DNA MER1_type -2 194 1 197 164 0 55 chr10 134368008 134368063 -5948702 + A-rich Low_complexity Low_complexity 1 52 0 393 218 0 0 chr10 134368554 134368678 -5948087 + (CA)n Simple_repeat Simple_repeat 1 124 0 1600 172 7 7 chr10 134370555 134370846 -5945919 + AluJb SINE Alu 1 291 -21 824 151 0 70 chr10 134371498 134371670 -5945095 + AluJb SINE Alu 137 296 -16 1692 156 4 0 chr10 134372277 134372553 -5944212 - AluSx SINE Alu -35 277 1 264 263 35 70 chr10 134372603 134372717 -5944048 - MIR3 SINE MIR -38 170 61 30 27 0 0 chr10 134373405 134373442 -5943323 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr10 134373591 134373616 -5943149 + AT_rich Low_complexity Low_complexity 1 25 0 1336 128 128 16 chr10 134373695 134373952 -5942813 - AluSx SINE Alu -26 286 1 297 85 0 0 chr10 134374797 134374844 -5941921 - AluSx SINE Alu 0 300 254 838 129 157 20 chr10 134374844 134374991 -5941774 - AluSx SINE Alu -142 170 4 264 280 60 47 chr10 134375083 134375233 -5941532 - MIR SINE MIR -90 172 21 1033 109 0 0 chr10 134376709 134376847 -5939918 - AluSg/x SINE Alu -18 292 155 22 0 0 0 chr10 134376930 134376952 -5939813 + GC_rich Low_complexity Low_complexity 1 22 0 211 361 46 9 chr10 134377653 134377761 -5939004 + MIR3 SINE MIR 93 204 -4 628 265 75 104 chr10 134378122 134378269 -5938496 - L2 LINE L2 -13 3300 3150 429 70 0 0 chr10 134378269 134378326 -5938439 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 628 265 75 104 chr10 134378326 134378552 -5938213 - L2 LINE L2 -163 3150 2938 311 289 20 55 chr10 134378846 134379047 -5937718 - L1M4 LINE L1 -1498 4648 4455 1702 167 0 28 chr10 134380024 134380341 -5936424 - AluJo SINE Alu -4 308 1 405 290 70 54 chr10 134380409 134380595 -5936170 + MIR SINE MIR 3 191 -71 2084 123 82 12 chr10 134381615 134381777 -5934988 - THE1B LTR MaLR 0 364 215 231 36 0 0 chr10 134381777 134381805 -5934960 + (GA)n Simple_repeat Simple_repeat 2 29 0 2084 123 82 12 chr10 134381805 134381982 -5934783 - THE1B LTR MaLR -149 215 1 1336 209 25 0 chr10 134383268 134383546 -5933219 + AluJo SINE Alu 3 287 -15 189 0 0 0 chr10 134383565 134383586 -5933179 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 364 317 65 0 chr10 134383640 134383763 -5933002 - MIR SINE MIR -27 235 105 2361 108 0 9 chr10 134384231 134384546 -5932219 + AluSq SINE Alu 1 312 -1 24 32 0 0 chr10 134384829 134384860 -5931905 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr10 134385389 134385411 -5931354 + AT_rich Low_complexity Low_complexity 1 22 0 2522 67 3 0 chr10 134385496 134385794 -5930971 + AluSp SINE Alu 5 303 -10 3398 201 58 22 chr10 134388517 134388857 -5927908 - L1MB7 LINE L1 0 6184 5858 2177 96 3 30 chr10 134388857 134389160 -5927605 - AluSp SINE Alu -18 295 1 3398 201 58 22 chr10 134389160 134389606 -5927159 - L1MB7 LINE L1 -326 5858 5369 185 326 12 0 chr10 134389929 134390015 -5926750 - L3 LINE CR1 -162 1415 1329 777 254 63 28 chr10 134391492 134391744 -5925021 + MIR SINE MIR 2 262 0 2395 93 0 3 chr10 134392677 134392988 -5923777 + AluSx SINE Alu 1 310 -2 2135 104 13 23 chr10 134394234 134394542 -5922223 + AluSq SINE Alu 1 305 -8 2569 248 49 16 chr10 134395287 134396041 -5920724 - L1ME2 LINE L1 -3 6161 5383 444 274 67 17 chr10 134396200 134396379 -5920386 + MIR SINE MIR 65 252 -10 1892 148 20 3 chr10 134396439 134396742 -5920023 + AluSx SINE Alu 1 308 -4 279 266 25 13 chr10 134397060 134397139 -5919626 + CT-rich Low_complexity Low_complexity 4 83 0 1282 90 0 0 chr10 134397382 134397559 -5919206 + AluYa5 SINE Alu 128 304 -7 379 158 24 0 chr10 134397802 134397884 -5918881 + L1MB4 LINE L1 6095 6178 -2 564 278 64 86 chr10 134399290 134399804 -5916961 - MLT1J LTR MaLR -8 503 1 192 40 0 0 chr10 134400390 134400415 -5916350 + (ATG)n Simple_repeat Simple_repeat 2 26 0 1629 166 33 0 chr10 134400415 134400686 -5916079 - AluJo SINE Alu -28 284 5 356 252 8 0 chr10 134400715 134400838 -5915927 + CT-rich Low_complexity Low_complexity 1 124 0 1120 292 88 35 chr10 134402426 134404055 -5912710 - L1MEc LINE L1 -3657 2558 803 2101 136 10 0 chr10 134405142 134405452 -5911313 + AluSq SINE Alu 1 313 0 212 289 0 0 chr10 134405520 134405572 -5911193 + CT-rich Low_complexity Low_complexity 4 55 0 2307 110 0 7 chr10 134406119 134406428 -5910337 - AluSx SINE Alu -5 307 1 1402 167 23 0 chr10 134406443 134406706 -5910059 - L1MA5 LINE L1 0 6300 6032 654 108 10 20 chr10 134408387 134408489 -5908276 - AluSq SINE Alu -100 213 113 518 110 96 2 chr10 134408945 134409040 -5907725 - L1MB3 LINE L1 -25 6158 6056 207 299 26 0 chr10 134409199 134409276 -5907489 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 255 329 0 0 chr10 134409357 134409442 -5907323 - L1MB3 LINE L1 -2020 5788 5704 1240 270 77 42 chr10 134410309 134410703 -5906062 - MLT1C LTR MaLR -17 450 38 2409 93 0 0 chr10 134410703 134411004 -5905761 - AluSg SINE Alu -9 301 1 1240 270 77 42 chr10 134411004 134411039 -5905726 - MLT1C LTR MaLR -429 38 6 283 276 207 0 chr10 134411171 134411316 -5905449 - MER5A DNA MER1_type -6 183 9 351 262 56 24 chr10 134412696 134412822 -5903943 - L2 LINE L2 -4 3309 3180 1059 232 49 4 chr10 134413607 134413870 -5902895 + L1M4 LINE L1 4487 4761 -1385 282 260 14 0 chr10 134413875 134413948 -5902817 - MLT1K LTR MaLR -32 556 483 2373 97 3 25 chr10 134415328 134415648 -5901117 + AluSp SINE Alu 1 313 0 185 0 0 39 chr10 134415708 134415734 -5901031 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1116 173 10 30 chr10 134415739 134415921 -5900844 - AluJb SINE Alu -29 283 104 1847 149 155 13 chr10 134415921 134416296 -5900469 - MSTA LTR MaLR 0 428 1 1116 173 10 30 chr10 134416296 134416315 -5900450 - AluJb SINE Alu -208 104 86 2315 101 0 0 chr10 134416668 134416965 -5899800 + AluY SINE Alu 1 297 -14 2199 127 0 0 chr10 134417561 134417861 -5898904 + AluSx SINE Alu 1 300 -12 30 27 0 0 chr10 134418567 134418604 -5898161 + AT_rich Low_complexity Low_complexity 1 37 0 2006 101 67 3 chr10 134419013 134419311 -5897454 + L1PB1 LINE L1 5608 5924 -227 272 270 40 27 chr10 134419290 134419438 -5897327 - L1MEc LINE L1 -3983 2413 2264 * 406 222 0 67 chr10 134419483 134419618 -5897147 - L1ME2 LINE L1 -7 6157 6032 1851 153 3 0 chr10 134420110 134420397 -5896368 + AluSq SINE Alu 17 304 -9 21 0 0 0 chr10 134421282 134421303 -5895462 + AT_rich Low_complexity Low_complexity 1 21 0 313 243 42 62 chr10 134422288 134422432 -5894333 - L1ME1 LINE L1 -5 6161 6021 2563 95 0 40 chr10 134422802 134423181 -5893584 - THE1B LTR MaLR 0 364 1 234 247 27 14 chr10 134425753 134425826 -5890939 - L2 LINE L2 -8 3305 3232 2309 98 0 0 chr10 134425980 134426277 -5890488 + AluSc SINE Alu 1 297 -12 211 306 16 0 chr10 134426505 134426567 -5890198 - L2 LINE L2 -5 3308 3246 2197 193 57 51 chr10 134431000 134431488 -5885277 - L1MB5 LINE L1 -7 6167 5674 2495 67 0 7 chr10 134431488 134431787 -5884978 - AluY SINE Alu -14 297 1 2197 193 57 51 chr10 134431787 134431843 -5884922 - L1MB5 LINE L1 -500 5674 5620 566 289 0 0 chr10 134432527 134432676 -5884089 - MER3 DNA MER1_type -55 154 6 1446 103 20 15 chr10 134433082 134433286 -5883479 - AluSq SINE Alu -107 206 2 252 247 65 0 chr10 134433290 134433367 -5883398 + MER5C DNA MER1_type 222 303 -21 636 270 72 58 chr10 134433413 134433706 -5883059 - MLT1C LTR MaLR 0 467 171 1114 123 0 0 chr10 134433706 134433895 -5882870 - AluJb SINE Alu 0 344 156 1678 148 0 15 chr10 134433897 134434160 -5882605 - AluJb SINE Alu -53 259 1 245 273 100 18 chr10 134434162 134434272 -5882493 - MLT1C LTR MaLR -215 175 57 1002 177 87 73 chr10 134434277 134434566 -5882199 - MSTD LTR MaLR 0 396 72 928 159 0 0 chr10 134434571 134434722 -5882043 + AluJb SINE Alu 156 306 -6 318 171 0 85 chr10 134434723 134434805 -5881960 - MSTD LTR MaLR -350 78 4 270 0 0 0 chr10 134436166 134436196 -5880569 + (TG)n Simple_repeat Simple_repeat 1 30 0 2302 120 0 0 chr10 134437329 134437628 -5879137 + AluSg SINE Alu 1 299 -11 211 306 81 8 chr10 134439018 134439142 -5877623 - MIR SINE MIR -71 191 59 2239 176 26 5 chr10 134439895 134440311 -5876454 - MSTB LTR MaLR 0 426 2 308 322 27 7 chr10 134442729 134442878 -5873887 + MIR SINE MIR 77 228 -34 1873 244 101 24 chr10 134443038 134443052 -5873713 - L1ME1 LINE L1 -6 6158 6147 2109 113 3 33 chr10 134443052 134443353 -5873412 + AluSq SINE Alu 1 292 -21 1873 244 101 24 chr10 134443353 134443755 -5873010 - L1ME1 LINE L1 -17 6147 5777 2708 162 44 21 chr10 134443755 134444274 -5872491 - LTR26B LTR ERV1 0 531 1 1873 244 101 24 chr10 134444274 134444987 -5871778 - L1ME1 LINE L1 -387 5777 4934 2546 129 3 3 chr10 134445439 134445803 -5870962 + THE1B LTR MaLR 1 364 0 1858 153 0 17 chr10 134446271 134446566 -5870199 - AluJb SINE Alu -19 293 4 892 136 6 31 chr10 134447460 134447622 -5869143 - FRAM SINE Alu -5 161 4 441 283 28 7 chr10 134448093 134448238 -5868527 + MER5A DNA MER1_type 4 151 -38 2108 134 3 3 chr10 134448810 134449109 -5867656 + AluSg SINE Alu 1 299 -11 353 300 148 35 chr10 134449241 134449471 -5867294 - MIR SINE MIR 0 262 7 28 0 0 0 chr10 134449498 134449526 -5867239 + AT_rich Low_complexity Low_complexity 1 28 0 229 300 122 45 chr10 134449573 134449820 -5866945 - L1ME LINE L1 -459 5662 5397 2653 212 73 13 chr10 134449870 134450567 -5866198 - L1MB7 LINE L1 0 6184 5446 2219 124 0 0 chr10 134452517 134452815 -5863950 - AluSx SINE Alu -14 298 1 1154 176 18 5 chr10 134454300 134454521 -5862244 - MLT2B2 LTR ERVL -291 224 1 233 349 68 5 chr10 134454575 134454767 -5861998 + L2 LINE L2 3109 3312 -1 488 246 70 50 chr10 134455148 134455251 -5861514 - L1MC5 LINE L1 -40 7921 7822 2298 111 0 0 chr10 134455251 134455558 -5861207 - AluSc SINE Alu -2 307 1 488 246 70 50 chr10 134455558 134455653 -5861112 - L1MC5 LINE L1 -139 7822 7719 224 174 0 22 chr10 134457973 134458019 -5858746 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 267 246 0 0 chr10 134459305 134459366 -5857399 - MIR SINE MIR -62 146 86 2337 74 3 14 chr10 134459540 134459837 -5856928 - AluY SINE Alu -17 294 1 1241 200 88 22 chr10 134460837 134461202 -5855563 - Charlie5 DNA MER1_type 0 2622 2234 326 222 22 0 chr10 134461200 134461290 -5855475 - Charlie5 DNA MER1_type -2478 134 43 * 251 275 167 7 chr10 134461387 134461525 -5855240 - MIR SINE MIR -5 257 98 243 157 0 0 chr10 134461952 134462003 -5854762 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 183 306 36 36 chr10 134462421 134462532 -5854233 - L2 LINE L2 -32 3281 3171 1669 84 0 18 chr10 134465414 134465641 -5851124 + AluY SINE Alu 89 311 0 23 0 0 0 chr10 134466453 134466476 -5850289 + AT_rich Low_complexity Low_complexity 1 23 0 2041 111 66 7 chr10 134466581 134466870 -5849895 - AluSg SINE Alu -4 306 1 875 127 0 15 chr10 134466944 134467078 -5849687 + FLAM_C SINE Alu 2 133 0 3105 78 0 0 chr10 134468867 134469276 -5847489 - L1PA8 LINE L1 -1 6171 5763 763 80 0 44 chr10 134469276 134469389 -5847376 + L1PA8 LINE L1 5681 5788 -366 2233 116 0 19 chr10 134470561 134470879 -5845886 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 134475930 134475955 -5840810 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 134479879 134479900 -5836865 + AT_rich Low_complexity Low_complexity 1 21 0 1798 122 114 7 chr10 134481940 134482211 -5834554 + AluSg1 SINE Alu 1 300 -9 187 333 103 0 chr10 134484215 134484302 -5832463 + MIR SINE MIR 32 127 -81 246 262 71 143 chr10 134484740 134485034 -5831731 + L2 LINE L2 2992 3264 -8 2258 101 0 0 chr10 134488272 134488579 -5828186 + AluSg SINE Alu 3 309 -1 249 231 0 0 chr10 134489694 134489746 -5827019 - MIR3 SINE MIR -11 197 146 21 0 0 0 chr10 134492538 134492559 -5824206 + AT_rich Low_complexity Low_complexity 1 21 0 812 169 44 49 chr10 134493085 134493268 -5823497 - MER20 DNA MER1_type -1 218 37 908 166 46 0 chr10 134494847 134495022 -5821743 + MER58 DNA MER1_type 3 185 -2235 425 195 188 16 chr10 134495025 134495153 -5821612 + MER58 DNA MER1_type 2270 2419 -1 22 0 0 0 chr10 134495288 134495310 -5821455 + AT_rich Low_complexity Low_complexity 1 22 0 265 78 0 39 chr10 134497026 134497077 -5819688 + (TTTTC)n Simple_repeat Simple_repeat 4 52 0 2335 77 3 3 chr10 134497081 134497392 -5819373 - AluSp SINE Alu -2 311 1 489 325 77 53 chr10 134497474 134497995 -5818770 - L2 LINE L2 -6 3266 2718 186 327 18 0 chr10 134499039 134499094 -5817671 + L2 LINE L2 3201 3256 -16 249 228 50 69 chr10 134503317 134503418 -5813347 - L2 LINE L2 -24 3248 3150 292 393 18 13 chr10 134503819 134504043 -5812722 + L2 LINE L2 3086 3310 -3 237 65 0 0 chr10 134504045 134504076 -5812689 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2275 93 3 0 chr10 134504696 134505007 -5811758 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 134506550 134506575 -5810190 + AT_rich Low_complexity Low_complexity 1 25 0 2300 85 0 0 chr10 134506582 134506889 -5809876 - AluY SINE Alu -4 307 1 372 295 171 34 chr10 134506942 134507142 -5809623 + MIR SINE MIR 19 244 -18 289 287 46 28 chr10 134508533 134508641 -5808124 - MIR SINE MIR -67 195 86 221 318 24 71 chr10 134509805 134509931 -5806834 + L2 LINE L2 3151 3270 -2 1010 199 62 0 chr10 134510039 134510250 -5806515 + MER58A DNA MER1_type 1 224 0 2233 93 0 3 chr10 134512228 134512529 -5804236 - AluSx SINE Alu -12 300 1 389 238 133 0 chr10 134512801 134512906 -5803859 - MER63 DNA MER1_type -91 745 1 645 186 199 6 chr10 134513377 134513538 -5803227 + MER3 DNA MER1_type 18 209 0 307 192 0 0 chr10 134513493 134513545 -5803220 - MER3 DNA MER1_type -117 92 41 * 21 36 0 0 chr10 134517655 134517683 -5799082 + AT_rich Low_complexity Low_complexity 1 28 0 247 337 55 30 chr10 134518365 134518512 -5798253 - MIR SINE MIR -38 170 20 837 228 47 9 chr10 134518857 134519068 -5797697 - MER20 DNA MER1_type 0 219 1 350 270 67 62 chr10 134520431 134520609 -5796156 - MIR SINE MIR -73 189 11 437 232 121 21 chr10 134521180 134521370 -5795395 + L1ME4a LINE L1 5688 5896 -225 183 129 0 0 chr10 134521687 134521718 -5795047 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr10 134523596 134523621 -5793144 + (T)n Simple_repeat Simple_repeat 1 25 0 324 301 134 37 chr10 134525391 134525637 -5791128 - L2 LINE L2 -1 3271 3002 1941 83 4 0 chr10 134525771 134526023 -5790742 + AluSc SINE Alu 1 253 -56 974 171 122 171 chr10 134526701 134527151 -5789614 - MSTA LTR MaLR 0 428 1 344 77 19 0 chr10 134528244 134528296 -5788469 + (GAAA)n Simple_repeat Simple_repeat 3 55 0 198 0 0 0 chr10 134528296 134528318 -5788447 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 313 319 0 35 chr10 134528333 134528449 -5788316 + MER5B DNA MER1_type 67 178 0 291 326 11 11 chr10 134528474 134528563 -5788202 + L2 LINE L2 3220 3308 -5 281 298 19 48 chr10 134529134 134529238 -5787527 + MIR SINE MIR 10 110 -152 526 311 63 13 chr10 134529262 134529500 -5787265 - MIR SINE MIR -10 252 3 26 50 0 0 chr10 134536712 134536752 -5780013 + GC_rich Low_complexity Low_complexity 1 40 0 306 440 73 71 chr10 134537083 134537478 -5779287 - L1M2 LINE L1 -5877 972 577 890 303 50 4 chr10 134539719 134540125 -5776640 + L1ME3 LINE L1 5681 6110 -60 3331 145 64 21 chr10 134540450 134540746 -5776019 - MER41C LTR ERV1 0 554 223 1660 149 76 3 chr10 134540746 134541034 -5775731 - AluSq SINE Alu -1 312 4 3331 145 64 21 chr10 134541034 134541268 -5775497 - MER41C LTR ERV1 -331 223 1 2080 141 0 0 chr10 134542374 134542673 -5774092 + AluSx SINE Alu 1 299 -13 335 214 0 45 chr10 134543128 134543217 -5773548 - MIR SINE MIR -147 115 31 2138 137 0 0 chr10 134544614 134544920 -5771845 - AluSx SINE Alu -6 306 1 2364 107 0 0 chr10 134546470 134546778 -5769987 - AluSx SINE Alu -4 308 1 253 273 31 78 chr10 134547516 134547644 -5769121 - MIR SINE MIR -34 228 107 908 232 13 52 chr10 134547973 134548206 -5768559 - MER58A DNA MER1_type 0 224 1 219 122 41 41 chr10 134551282 134551331 -5765434 + T-rich Low_complexity Low_complexity 4 52 0 627 207 37 0 chr10 134551334 134551469 -5765296 - L1MB1 LINE L1 -2 6166 6027 2195 91 0 27 chr10 134554341 134554638 -5762127 - AluY SINE Alu -19 292 4 400 344 25 8 chr10 134554889 134555133 -5761632 - L1ME3A LINE L1 -221 5949 5702 186 103 0 0 chr10 134556804 134556833 -5759932 + (A)n Simple_repeat Simple_repeat 1 29 0 212 214 18 0 chr10 134557532 134557588 -5759177 + GA-rich Low_complexity Low_complexity 2 58 0 1228 219 9 42 chr10 134558223 134558557 -5758208 - L1P LINE L1 -1036 5110 4788 240 234 0 21 chr10 134558937 134558984 -5757781 - MIR SINE MIR -135 73 28 883 235 96 62 chr10 134559226 134559579 -5757186 - MLT1A1 LTR MaLR 0 365 1 1345 155 13 17 chr10 134559964 134560203 -5756562 - L1MB2 LINE L1 -2 6169 5932 690 201 98 11 chr10 134560903 134561077 -5755688 + MER53 DNA DNA 1 189 0 232 222 0 0 chr10 134561836 134561881 -5754884 + MLT1B LTR MaLR 344 388 -2 507 17 0 0 chr10 134563113 134563173 -5753592 + (TTGTG)n Simple_repeat Simple_repeat 1 60 0 1609 188 0 38 chr10 134563173 134563466 -5753299 - AluJo SINE Alu -30 282 1 375 229 189 39 chr10 134563479 134563632 -5753133 - L1MC3 LINE L1 -1 7757 6168 1496 145 35 0 chr10 134563922 134564149 -5752616 + MER46A DNA MER2_type 1 235 -1 2064 138 10 3 chr10 134564768 134565065 -5751700 + AluSx SINE Alu 1 299 -13 938 201 0 0 chr10 134565067 134565231 -5751534 + AluJo/FRAM SINE Alu 141 304 -8 30 0 0 0 chr10 134565270 134565300 -5751465 + AT_rich Low_complexity Low_complexity 1 30 0 2182 106 0 10 chr10 134566286 134566589 -5750176 + AluSg SINE Alu 1 300 -10 1982 129 3 3 chr10 134566953 134567239 -5749526 + AluSx SINE Alu 1 286 -26 210 37 0 0 chr10 134567242 134567269 -5749496 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 235 333 38 9 chr10 134567466 134567571 -5749194 + L2 LINE L2 3165 3272 0 5251 157 21 79 chr10 134569276 134569442 -5747323 - L1MA8 LINE L1 0 6291 6117 2134 84 38 7 chr10 134569442 134569729 -5747036 + AluSx SINE Alu 1 296 -16 5251 157 21 79 chr10 134569729 134571562 -5745203 - L1MA8 LINE L1 -174 6117 4386 922 170 85 0 chr10 134571898 134572063 -5744702 - AluJb SINE Alu 0 312 134 321 203 51 13 chr10 134572406 134572485 -5744280 - L2 LINE L2 -60 3253 3172 222 261 76 22 chr10 134572531 134572623 -5744142 - L2 LINE L2 -304 3009 2913 463 287 59 29 chr10 134574938 134575245 -5741520 + L1M4 LINE L1 4442 4757 -1389 35 41 0 0 chr10 134575368 134575417 -5741348 + AT_rich Low_complexity Low_complexity 1 49 0 185 184 23 23 chr10 134575448 134575535 -5741230 + (TA)n Simple_repeat Simple_repeat 2 88 0 2580 248 36 6 chr10 134575660 134576784 -5739981 - L1ME1 LINE L1 -15 6151 4957 476 150 0 20 chr10 134576792 134576892 -5739873 + (TCCC)n Simple_repeat Simple_repeat 4 101 0 382 356 88 21 chr10 134577103 134577342 -5739423 - MIR SINE MIR -1 261 7 2334 100 0 3 chr10 134577392 134577702 -5739063 + AluSq SINE Alu 1 309 -4 338 264 119 38 chr10 134578203 134578362 -5738403 - L1MC4 LINE L1 -6 8036 7865 521 313 33 48 chr10 134578648 134579041 -5737724 - L1MC4 LINE L1 -733 7309 6923 21 100 0 0 chr10 134579695 134579765 -5737000 + AT_rich Low_complexity Low_complexity 1 70 0 21 36 0 0 chr10 134580224 134580252 -5736513 + AT_rich Low_complexity Low_complexity 1 28 0 2045 103 21 3 chr10 134581354 134581636 -5735129 + AluSx SINE Alu 1 287 -25 266 254 30 75 chr10 134581832 134581966 -5734799 - HAL1 LINE L1 -1744 763 636 226 251 124 54 chr10 134582256 134582515 -5734250 - HAL1 LINE L1 -2171 336 60 717 272 121 60 chr10 134584318 134584405 -5732360 - L1ME4a LINE L1 -265 5856 5776 740 166 52 78 chr10 134584405 134584598 -5732167 + MER53 DNA DNA 2 189 0 717 272 121 60 chr10 134584598 134584973 -5731792 - L1ME4a LINE L1 -345 5776 5366 196 246 217 0 chr10 134586565 134586634 -5730131 + MIR SINE MIR 60 143 -119 2085 109 0 3 chr10 134589116 134589400 -5727365 + MER1B DNA MER1_type 57 339 0 267 225 0 0 chr10 134589669 134589740 -5727025 + (TA)n Simple_repeat Simple_repeat 2 72 0 252 253 0 0 chr10 134589840 134589931 -5726834 + (TG)n Simple_repeat Simple_repeat 1 91 0 367 317 38 21 chr10 134590411 134590651 -5726114 - MIR SINE MIR -17 245 2 2281 68 0 52 chr10 134592017 134592324 -5724441 - AluSp SINE Alu -22 291 1 7807 20 0 0 chr10 134592429 134593933 -5722832 - L1PA3 LINE L1 -3 6152 4653 653 180 101 7 chr10 134594395 134594534 -5722231 - MER21B LTR ERV1 -58 805 654 1919 156 0 29 chr10 134594637 134594945 -5721820 + AluJo SINE Alu 1 299 -13 229 271 6 105 chr10 134595213 134595394 -5721371 - L1MC4 LINE L1 -388 7654 7492 372 296 13 83 chr10 134595454 134595806 -5720959 - L1MC4 LINE L1 -417 7391 7083 1642 160 8 8 chr10 134596164 134596427 -5720338 + AluJo SINE Alu 1 263 -49 22 0 0 0 chr10 134596434 134596456 -5720309 + AT_rich Low_complexity Low_complexity 1 22 0 261 164 98 0 chr10 134599081 134599142 -5717623 - L1MD2 LINE L1 -16 6343 6277 898 255 52 11 chr10 134599144 134599415 -5717350 - L1MD2 LINE L1 -144 6215 5934 216 0 0 0 chr10 134599519 134599543 -5717222 + (CA)n Simple_repeat Simple_repeat 1 24 0 869 268 26 0 chr10 134601006 134601200 -5715565 + MER20 DNA MER1_type 4 202 -17 1881 110 69 28 chr10 134601277 134601568 -5715197 + AluSg SINE Alu 7 309 -1 368 324 66 33 chr10 134602050 134602263 -5714502 + MIR SINE MIR 8 227 -35 2012 105 38 110 chr10 134603640 134604032 -5712733 - THE1B LTR MaLR 0 364 1 1836 146 14 3 chr10 134604568 134604862 -5711903 + AluSx SINE Alu 1 297 -15 390 379 48 10 chr10 134605325 134605639 -5711126 - L2 LINE L2 -553 2761 2436 706 183 20 33 chr10 134605799 134605952 -5710813 - MER106B DNA MER1_type -908 151 1 203 327 166 32 chr10 134605957 134606826 -5709939 - L2 LINE L2 -972 2342 1358 2120 114 0 17 chr10 134608546 134608843 -5707922 + AluSx SINE Alu 1 292 -20 440 273 74 11 chr10 134610355 134610531 -5706234 - MIR SINE MIR -55 207 21 30 27 0 0 chr10 134611064 134611101 -5705664 + AT_rich Low_complexity Low_complexity 1 37 0 2678 24 0 0 chr10 134611101 134611397 -5705368 - AluY SINE Alu -15 296 1 253 282 40 74 chr10 134711692 134711841 -5604924 + MER5A DNA MER1_type 32 175 -3 2115 121 14 7 chr10 134712134 134712424 -5604341 - AluSc SINE Alu -17 292 1 570 286 96 64 chr10 134712505 134712879 -5603886 + L1MC5 LINE L1 7548 7933 -28 1872 167 20 10 chr10 134712881 134713181 -5603584 + AluJb SINE Alu 1 303 -9 241 250 164 3 chr10 134713624 134713738 -5603027 - MIR SINE MIR -47 161 31 2160 148 3 0 chr10 134714092 134714403 -5602362 - AluSx SINE Alu 0 312 1 220 346 9 37 chr10 134714517 134714624 -5602141 - MIR SINE MIR -46 216 113 443 277 92 11 chr10 134715066 134715250 -5601515 - MIR SINE MIR -52 210 12 180 325 0 65 chr10 134715232 134715309 -5601456 + L2 LINE L2 3241 3312 -1 * 504 246 0 0 chr10 134715323 134715568 -5601197 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 621 174 0 0 chr10 134715605 134715737 -5601028 + (TGGA)n Simple_repeat Simple_repeat 1 132 0 327 238 135 40 chr10 134716773 134716899 -5599866 + MIR SINE MIR 10 147 -115 283 301 168 38 chr10 134716903 134717249 -5599516 - L2 LINE L2 -2 3311 2921 2304 105 13 7 chr10 134717592 134717898 -5598867 + AluSq SINE Alu 1 308 -5 190 276 53 40 chr10 134717940 134718016 -5598749 + L3 LINE CR1 230 306 -1271 775 217 6 0 chr10 134718595 134718770 -5597995 + MER53 DNA DNA 14 189 0 316 268 0 52 chr10 134719364 134719461 -5597304 - MIR SINE MIR -70 192 101 283 378 27 5 chr10 134719774 134719959 -5596806 + L1MC/D LINE L1 5611 5799 -2009 2027 84 3 0 chr10 134720144 134720428 -5596337 + L1PA8 LINE L1 5886 6170 -2 1459 123 25 185 chr10 134720542 134720909 -5595856 - AluSg SINE Alu -2 308 1 2315 107 13 0 chr10 134721531 134721830 -5594935 - AluSx SINE Alu -9 303 1 986 192 25 5 chr10 134722732 134722930 -5593835 - MER58A DNA MER1_type -14 210 9 2450 133 52 36 chr10 134723339 134723513 -5593252 + L1MA8 LINE L1 5777 5947 -344 1804 186 6 3 chr10 134723513 134723824 -5592941 + AluJo SINE Alu 1 312 0 2450 133 52 36 chr10 134723824 134724153 -5592612 + L1MA8 LINE L1 5947 6288 -3 25 0 0 0 chr10 134724188 134724213 -5592552 + AT_rich Low_complexity Low_complexity 1 25 0 2197 117 13 13 chr10 134724218 134724525 -5592240 - AluSx SINE Alu -3 309 3 1303 156 54 0 chr10 134724757 134724962 -5591803 + AluSx SINE Alu 1 216 -96 247 365 64 0 chr10 134724990 134725193 -5591572 + L2 LINE L2 2155 2370 -944 2150 131 0 0 chr10 134726308 134726605 -5590160 + AluSx SINE Alu 8 304 -8 371 315 54 22 chr10 134726608 134726792 -5589973 - MIR SINE MIR -32 230 41 642 209 39 96 chr10 134726821 134727051 -5589714 + MER20 DNA MER1_type 1 217 -2 200 184 0 0 chr10 134727483 134727521 -5589244 + C-rich Low_complexity Low_complexity 1 38 0 1452 175 14 37 chr10 134728370 134728667 -5588098 - AluJb SINE Alu -22 290 1 625 290 16 36 chr10 134728750 134728998 -5587767 - MIR SINE MIR -12 250 8 295 280 118 48 chr10 134731116 134731561 -5585204 - L2 LINE L2 -11 3261 2803 242 301 88 0 chr10 134732035 134732148 -5584617 + L2 LINE L2 3178 3300 -13 433 293 16 0 chr10 134732238 134732361 -5584404 - MIR SINE MIR -38 224 100 2734 216 57 7 chr10 134732378 134732980 -5583785 + ERVL LTR ERVL 1518 2149 -3615 215 317 17 0 chr10 134732985 134733045 -5583720 - MIR SINE MIR -187 75 15 2123 108 4 0 chr10 134733296 134733613 -5583152 + AluSc SINE Alu 1 318 0 2501 67 0 26 chr10 134733847 134734159 -5582606 - AluY SINE Alu -7 304 1 210 176 0 0 chr10 134734805 134734856 -5581909 + GA-rich Low_complexity Low_complexity 2 52 0 1420 169 36 16 chr10 134734925 134735174 -5581591 + AluJo SINE Alu 42 295 -17 335 325 169 0 chr10 134735176 134735336 -5581429 - L2 LINE L2 -609 2705 2519 217 262 24 36 chr10 134735345 134735429 -5581336 + MER5A DNA MER1_type 107 189 0 2148 122 7 7 chr10 134735741 134736035 -5580730 + AluSq SINE Alu 1 294 -19 432 284 272 11 chr10 134736096 134736722 -5580043 - L2 LINE L2 -244 3028 2243 4854 124 263 75 chr10 134738012 134739411 -5577354 + pTR5 LTR ERV1 211 2438 0 235 295 133 9 chr10 134739506 134739611 -5577154 + MIR3 SINE MIR 43 154 -54 352 308 26 32 chr10 134739655 134739811 -5576954 + L1M4 LINE L1 2398 2552 -3594 468 254 154 51 chr10 134739820 134740200 -5576565 + MLT1J2 LTR MaLR 2 448 -2 189 0 0 0 chr10 134740344 134740365 -5576400 + (A)n Simple_repeat Simple_repeat 1 21 0 363 260 99 40 chr10 134740367 134740590 -5576175 + L1M4 LINE L1 2722 2957 -3189 303 28 0 0 chr10 134740593 134740629 -5576136 + (TA)n Simple_repeat Simple_repeat 2 37 0 421 184 20 10 chr10 134740646 134740744 -5576021 - L1M4 LINE L1 -1425 4721 4623 2095 95 0 48 chr10 134741880 134742196 -5574569 - AluSg SINE Alu -9 301 1 350 294 84 51 chr10 134742590 134742804 -5573961 + MIR SINE MIR 32 252 -10 2826 203 21 78 chr10 134743129 134744156 -5572609 - LTR5 LTR ERVK 0 969 1 24 32 0 0 chr10 134744615 134744646 -5572119 + AT_rich Low_complexity Low_complexity 1 31 0 2011 244 25 60 chr10 134744666 134744918 -5571847 - L1MB3 LINE L1 -30 6153 5894 1849 127 35 0 chr10 134744918 134745201 -5571564 - AluSx SINE Alu -17 295 3 2011 244 25 60 chr10 134745201 134745336 -5571429 - L1MB3 LINE L1 -289 5894 5756 1772 137 3 20 chr10 134745336 134745636 -5571129 - AluSx SINE Alu -17 295 1 2011 244 25 60 chr10 134745636 134746630 -5570135 - L1MB3 LINE L1 -427 5756 4818 2084 97 3 3 chr10 134746675 134746975 -5569790 + AluSp SINE Alu 1 300 -13 1240 228 3 72 chr10 134747059 134747261 -5569504 - L1MA4 LINE L1 -175 6125 5961 1551 168 4 4 chr10 134747261 134747541 -5569224 - AluSx SINE Alu -32 280 1 1240 228 3 72 chr10 134747541 134747724 -5569041 - L1MA4 LINE L1 -339 5961 5767 267 259 105 35 chr10 134747762 134747905 -5568860 + HsTC2 DNA Tc2 1633 1785 -113 1878 134 3 31 chr10 134747910 134748230 -5568535 + AluSp SINE Alu 1 311 -2 358 239 97 9 chr10 134748418 134748531 -5568234 + MER5B DNA MER1_type 50 172 -6 623 235 51 0 chr10 134748636 134748832 -5567933 - MER6B DNA MER2_type 0 210 5 204 97 0 0 chr10 134849142 134849173 -5467592 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 658 159 0 19 chr10 134849176 134849283 -5467482 - FLAM_A SINE Alu -34 108 4 308 206 14 0 chr10 134849332 134849405 -5467360 + L1MA10 LINE L1 6260 6333 -1 2038 218 36 6 chr10 134849407 134849935 -5466830 - L1MEc LINE L1 -3906 2311 1768 207 313 101 0 chr10 134850739 134850838 -5465927 + MIR SINE MIR 101 209 -53 254 182 15 76 chr10 134851075 134851141 -5465624 - MIR3 SINE MIR -8 200 139 369 286 117 100 chr10 134851877 134852359 -5464406 - L1M4 LINE L1 -804 5342 4870 659 287 0 0 chr10 134852359 134852509 -5464256 + FRAM SINE Alu 1 150 -16 369 286 117 100 chr10 134852509 134852604 -5464161 - L1M4 LINE L1 -1276 4870 4778 1782 140 0 18 chr10 134852604 134852889 -5463876 + AluJb SINE Alu 1 280 -32 369 286 117 100 chr10 134852889 134853061 -5463704 - L1M4 LINE L1 -1368 4778 4579 437 220 128 46 chr10 134853917 134854135 -5462630 - L1MEc LINE L1 -4640 1756 1521 870 236 124 56 chr10 134854292 134854617 -5462148 - L1MC5 LINE L1 -100 7861 7560 1851 111 20 93 chr10 134854617 134854960 -5461805 - AluYb8 SINE Alu 0 318 1 1647 159 46 7 chr10 134854960 134855243 -5461522 - AluJo SINE Alu -18 294 1 870 236 124 56 chr10 134855243 134855571 -5461194 - L1MC5 LINE L1 -400 7561 7254 1751 242 46 55 chr10 134855605 134856412 -5460353 - L1MC5 LINE L1 -731 7230 6485 25 31 0 0 chr10 134856448 134856480 -5460285 + AT_rich Low_complexity Low_complexity 1 32 0 297 0 0 0 chr10 134856528 134856561 -5460204 + (CA)n Simple_repeat Simple_repeat 2 34 0 1033 293 44 33 chr10 134857136 134857593 -5459172 - L1MC5 LINE L1 -1923 5885 5424 337 260 45 51 chr10 134857647 134857939 -5458826 - L1MEc LINE L1 -5071 1325 1036 2137 199 51 12 chr10 134858315 134858895 -5457870 - L1MD2 LINE L1 -2 6357 5591 2072 134 0 0 chr10 134862212 134862525 -5454240 - AluSq SINE Alu 0 313 1 1968 117 28 3 chr10 134862554 134862845 -5453920 - AluSx SINE Alu -14 298 1 523 133 0 97 chr10 134862902 134862995 -5453770 + AluJ SINE Alu 24 106 -206 2401 170 22 7 chr10 134862995 134863412 -5453353 - MSTB LTR MaLR -2 424 2 523 133 0 97 chr10 134863412 134863431 -5453334 + AluJ SINE Alu 106 125 -187 731 244 32 0 chr10 134863447 134863603 -5453162 + AluJ SINE Alu 141 301 -1 289 256 16 66 chr10 134863918 134864039 -5452726 + MIR3 SINE MIR 79 193 -15 1563 226 64 44 chr10 134866864 134867006 -5449759 + MLT1C LTR MaLR 1 139 -328 2014 116 0 17 chr10 134867006 134867307 -5449458 - AluSx SINE Alu -16 296 1 1563 226 64 44 chr10 134867307 134867620 -5449145 + MLT1C LTR MaLR 139 465 -2 2259 101 0 0 chr10 134869567 134869874 -5446891 + AluSx SINE Alu 1 307 -5 414 0 0 0 chr10 134870645 134870691 -5446074 + (TG)n Simple_repeat Simple_repeat 2 47 0 1703 186 120 24 chr10 134870936 134871361 -5445404 - MER31B LTR ERV1 0 466 1 316 138 0 39 chr10 134871429 134871493 -5445272 + Alu SINE Alu 1 44 -258 1606 176 7 7 chr10 134871493 134871771 -5444994 + AluJb SINE Alu 14 291 -21 1808 172 13 0 chr10 134872507 134872815 -5443950 + AluJo SINE Alu 1 312 0 2202 109 0 6 chr10 134873905 134874218 -5442547 - AluSx SINE Alu -1 311 1 6720 88 19 4 chr10 134876320 134877633 -5439132 - L1PA8 LINE L1 0 6172 4854 2114 124 3 0 chr10 134877779 134878078 -5438687 - AluSx SINE Alu -12 300 1 438 273 169 0 chr10 134878977 134879131 -5437634 - MER5A DNA MER1_type 0 189 10 894 166 40 7 chr10 134879310 134879461 -5437304 - MER46A DNA MER2_type -79 157 2 806 158 104 68 chr10 134879461 134879545 -5437220 + MER46A DNA MER2_type 145 236 0 1658 97 0 0 chr10 134879756 134879983 -5436782 - AluSg/x SINE Alu 0 310 84 249 108 0 0 chr10 134880710 134880747 -5436018 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 2153 168 8 3 chr10 134883171 134883534 -5433231 + MLT1B LTR MaLR 25 389 -1 1906 95 18 4 chr10 134883629 134883902 -5432863 - AluSx SINE Alu -35 277 1 1173 204 37 27 chr10 134883937 134884236 -5432529 - L1MA9 LINE L1 -30 6282 5981 495 277 43 87 chr10 134886589 134886889 -5429876 - L2 LINE L2 -38 3275 2989 462 142 19 19 chr10 134889112 134889218 -5427547 + C-rich Low_complexity Low_complexity 3 108 0 1648 155 3 20 chr10 134889724 134890027 -5426738 + AluSx SINE Alu 1 298 -14 1960 149 3 0 chr10 134890220 134890521 -5426244 - AluSx SINE Alu -10 302 1 1241 229 26 52 chr10 134890544 134890893 -5425872 + MER58B DNA MER1_type 1 340 -1 260 292 54 5 chr10 134891668 134891806 -5424959 + MIR SINE MIR 30 174 -34 512 266 110 46 chr10 134893397 134893615 -5423150 - MIR SINE MIR -24 238 7 11451 118 15 4 chr10 134893898 134895617 -5421148 - Tigger1 DNA MER2_type -14 2404 667 217 280 27 18 chr10 134895802 134895896 -5420869 - MIR SINE MIR -54 154 64 207 0 0 0 chr10 134896152 134896175 -5420590 + (A)n Simple_repeat Simple_repeat 1 23 0 32 0 0 0 chr10 134896960 134896992 -5419773 + AT_rich Low_complexity Low_complexity 1 32 0 598 214 126 0 chr10 134897012 134897171 -5419594 - L1MB4 LINE L1 -14 6166 5988 300 286 33 0 chr10 134898316 134898407 -5418358 - MER58 DNA MER1_type -75 266 173 2001 140 6 52 chr10 134898408 134898620 -5418145 + L1M3 LINE L1 5444 5633 -550 3208 173 17 92 chr10 134898620 134899303 -5417462 - MER72 LTR ERV1 -2 720 102 2197 103 3 0 chr10 134899303 134899614 -5417151 - AluSq SINE Alu -1 312 1 3208 173 17 92 chr10 134899614 134899709 -5417056 - MER72 LTR ERV1 -620 102 1 2001 140 6 52 chr10 134899709 134899860 -5416905 + L1M3 LINE L1 5633 5790 -393 333 296 80 8 chr10 134899866 134899991 -5416774 + MIR SINE MIR 117 250 -12 709 190 7 0 chr10 134902162 134902304 -5414461 - L1MA7 LINE L1 0 6291 6149 209 219 0 0 chr10 134903170 134903211 -5413554 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 300 315 19 37 chr10 134903212 134903320 -5413445 - L2 LINE L2 0 3272 3167 1889 76 4 23 chr10 134903669 134903832 -5412933 - AluSx SINE Alu -16 296 138 2309 80 0 7 chr10 134903832 134904133 -5412632 - AluY SINE Alu -12 299 1 1889 76 4 23 chr10 134904133 134904231 -5412534 - AluSx SINE Alu -174 138 40 2355 79 3 0 chr10 134904653 134904956 -5411809 - AluY SINE Alu -7 304 1 313 65 130 0 chr10 134905715 134905761 -5411004 - MER53 DNA DNA -137 52 1 362 174 16 16 chr10 134907807 134907928 -5408837 + (TG)n Simple_repeat Simple_repeat 1 121 0 26 0 0 0 chr10 134908254 134908280 -5408485 + AT_rich Low_complexity Low_complexity 1 26 0 348 349 7 0 chr10 134908630 134908779 -5407986 - L1MB4 LINE L1 -1993 5815 5666 563 111 0 24 chr10 134908940 134909194 -5407571 + AluJb SINE Alu 19 312 0 433 275 85 32 chr10 134909541 134909730 -5407035 + MIR SINE MIR 41 239 -23 2245 95 3 0 chr10 134910055 134910359 -5406406 - AluSc SINE Alu -4 305 1 365 136 15 0 chr10 134910490 134910556 -5406209 + CT-rich Low_complexity Low_complexity 1 67 0 23 0 0 0 chr10 134910597 134910620 -5406145 + AT_rich Low_complexity Low_complexity 1 23 0 343 311 61 0 chr10 134910837 134911033 -5405732 - L1ME LINE L1 -339 5782 5575 247 256 49 49 chr10 134918279 134918361 -5398404 - L2 LINE L2 -44 3269 3188 318 288 165 12 chr10 134919428 134919598 -5397167 - L1ME LINE L1 -706 5456 5261 312 290 196 25 chr10 134919773 134920177 -5396588 - L1ME LINE L1 -1111 5035 4563 381 162 0 0 chr10 134920742 134920810 -5395955 + (TTG)n Simple_repeat Simple_repeat 2 69 0 277 286 193 31 chr10 134921056 134921248 -5395517 + MIR SINE MIR 28 250 -12 201 229 0 0 chr10 134921390 134921425 -5395340 - MIR SINE MIR -111 151 117 2159 110 0 0 chr10 134921649 134921940 -5394825 + AluSx SINE Alu 1 291 -21 671 306 97 5 chr10 134921941 134922157 -5394608 - MIR SINE MIR -6 256 21 866 171 19 0 chr10 134923424 134923582 -5393183 + FAM SINE Alu 1 48 -1 1375 168 39 56 chr10 134923607 134923892 -5392873 + MER7A DNA MER2_type 66 343 -3 450 323 53 13 chr10 134923908 134924134 -5392631 - MIR SINE MIR -12 250 16 1895 143 0 10 chr10 134925004 134925311 -5391454 + AluJo SINE Alu 6 309 -3 570 15 0 0 chr10 134926519 134926586 -5390179 + (TTCCC)n Simple_repeat Simple_repeat 1 67 0 180 0 0 0 chr10 134927334 134927354 -5389411 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1988 191 39 35 chr10 134928277 134928737 -5388028 - MLT1C LTR MaLR -2 465 4 321 284 47 0 chr10 134928773 134928900 -5387865 - MER112 DNA MER1_type -91 169 37 321 333 47 16 chr10 134929073 134929202 -5387563 + L2 LINE L2 2922 3054 -259 199 171 122 0 chr10 134929449 134929490 -5387275 + L2 LINE L2 3264 3309 -4 265 133 0 0 chr10 134929658 134929703 -5387062 - MIR SINE MIR -125 137 93 201 274 105 65 chr10 134929973 134930126 -5386639 + MIR SINE MIR 58 216 -46 370 200 0 34 chr10 134930842 134931017 -5385748 + G-rich Low_complexity Low_complexity 1 169 0 2202 99 0 0 chr10 134931285 134931579 -5385186 - AluSx SINE Alu -18 294 1 270 298 36 12 chr10 134935018 134935102 -5381663 + MIR3 SINE MIR 120 205 -3 25 0 0 0 chr10 134936681 134936706 -5380059 + AT_rich Low_complexity Low_complexity 1 25 0 287 312 113 28 chr10 134939496 134939637 -5377128 + MIR SINE MIR 47 199 -63 2373 71 0 3 chr10 134939790 134940100 -5376665 - AluY SINE Alu -2 309 1 996 210 100 72 chr10 134941512 134941912 -5374853 + MLT1C LTR MaLR 52 462 -5 762 178 150 66 chr10 134942702 134942915 -5373850 + L1MCa LINE L1 28 258 -6168 1409 218 71 0 chr10 134942916 134943256 -5373509 + L1MCa LINE L1 778 1141 -5285 26 0 0 0 chr10 134944354 134944380 -5372385 + AT_rich Low_complexity Low_complexity 1 26 0 2254 105 20 0 chr10 134944535 134944839 -5371926 + AluSx SINE Alu 3 312 0 686 228 64 30 chr10 134946336 134946538 -5370227 + MER3 DNA MER1_type 1 209 0 22 0 0 0 chr10 134947068 134947090 -5369675 + AT_rich Low_complexity Low_complexity 1 22 0 190 286 78 26 chr10 134947576 134947653 -5369112 - L2 LINE L2 -1884 1430 1350 369 0 0 0 chr10 134948876 134948917 -5367848 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 402 187 22 11 chr10 134950822 134950913 -5365852 - AluJ/FRAM SINE Alu -1 311 220 183 243 0 0 chr10 134950998 134951035 -5365730 + L2 LINE L2 3228 3264 -8 * 195 304 88 29 chr10 134951009 134951111 -5365654 - L3 LINE CR1 -667 910 803 181 387 11 0 chr10 134951301 134951394 -5365371 - L3 LINE CR1 -896 681 588 1180 255 74 19 chr10 134952523 134952954 -5363811 - MLT1C LTR MaLR -10 457 3 3598 127 6 6 chr10 134953232 134953758 -5363007 + MER1A DNA MER1_type 2 527 0 198 0 0 0 chr10 134953949 134953971 -5362794 + (CAGGG)n Simple_repeat Simple_repeat 3 24 0 191 270 130 0 chr10 134954098 134954198 -5362567 + L2 LINE L2 2818 2930 -342 441 350 25 35 chr10 134954465 134954668 -5362097 + L2 LINE L2 3112 3312 -1 258 217 54 22 chr10 134954941 134955033 -5361732 + MER20 DNA MER1_type 124 218 -1 272 222 136 3 chr10 134955643 134955731 -5361034 - MLT1I LTR MaLR -243 166 81 1674 153 114 17 chr10 134956474 134956651 -5360114 + MSTA LTR MaLR 1 159 -206 2217 92 27 3 chr10 134956651 134956943 -5359822 + AluSq SINE Alu 1 299 -14 1674 153 114 17 chr10 134956943 134957144 -5359621 + MSTA LTR MaLR 159 356 -9 423 192 135 82 chr10 134957254 134957287 -5359478 + Charlie5 DNA MER1_type 2406 2436 -188 2352 144 10 15 chr10 134957287 134957676 -5359089 + MLT1B LTR MaLR 3 389 -1 423 192 135 82 chr10 134957676 134957850 -5358915 + Charlie5 DNA MER1_type 2436 2624 0 471 233 187 13 chr10 134959094 134959244 -5357521 - MER5A DNA MER1_type -5 184 9 444 202 50 0 chr10 134959356 134959455 -5357310 - L1MC1 LINE L1 0 6333 6230 195 328 35 26 chr10 134961873 134961989 -5354776 - L2 LINE L2 -212 3060 2944 1625 204 25 17 chr10 134962070 134962432 -5354333 - MLT1A1 LTR MaLR 0 365 1 704 276 102 0 chr10 134963211 134963486 -5353279 + L2 LINE L2 1543 1845 -1469 462 267 75 12 chr10 134967416 134967577 -5349188 + MIR SINE MIR 18 188 -74 1371 165 69 21 chr10 134967623 134968177 -5348588 + LTR8A LTR ERV1 3 634 -93 1585 168 18 4 chr10 134968179 134968453 -5348312 - MER50 LTR ERV1 -23 711 434 * 1694 151 39 3 chr10 134968445 134968750 -5348015 - MER50 LTR ERV1 -418 316 1 469 149 0 0 chr10 134968750 134968824 -5347941 + LTR8A LTR ERV1 632 705 -22 205 246 105 118 chr10 134969002 134969230 -5347535 - L2 LINE L2 -20 3252 3028 2265 102 0 0 chr10 134970395 134970690 -5346075 + AluY SINE Alu 1 295 -16 2321 198 38 6 chr10 134971586 134972066 -5344699 - L1MB3 LINE L1 0 6183 5689 1787 160 83 3 chr10 134974103 134974441 -5342324 - MLT1A1 LTR MaLR 0 365 1 639 197 111 67 chr10 134978317 134978476 -5338289 - MER20 DNA MER1_type 0 219 47 2104 120 10 0 chr10 134978476 134978767 -5337998 + AluSq SINE Alu 1 294 -19 639 197 111 67 chr10 134978767 134978815 -5337950 - MER20 DNA MER1_type -172 47 3 2578 71 0 0 chr10 134978868 134979179 -5337586 - AluY SINE Alu 0 311 1 430 127 51 0 chr10 134979232 134979311 -5337454 - FLAM_A SINE Alu 0 142 60 198 356 56 0 chr10 134980097 134980187 -5336578 - MIR SINE MIR -75 133 39 2028 141 0 0 chr10 134980835 134981119 -5335646 - AluSx SINE Alu -18 294 11 184 212 45 61 chr10 134983128 134983194 -5333571 + L2 LINE L2 3219 3283 -30 2067 137 20 0 chr10 134984493 134984793 -5331972 - AluSx SINE Alu -6 306 1 710 201 5 98 chr10 134985917 134986121 -5330644 + MER58A DNA MER1_type 40 224 0 222 229 171 43 chr10 134986477 134986547 -5330218 + L2 LINE L2 3225 3303 -10 1286 87 23 0 chr10 134987597 134987770 -5328995 + AluSg/x SINE Alu 122 298 -14 303 28 0 0 chr10 134987815 134987851 -5328914 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1972 132 14 7 chr10 134987853 134988133 -5328632 - AluSx SINE Alu -30 282 1 202 153 51 17 chr10 134988331 134988369 -5328396 + (TA)n Simple_repeat Simple_repeat 1 43 -18 3650 172 11 37 chr10 134988369 134989077 -5327688 - L1MB3 LINE L1 -6 6177 5489 2611 69 0 0 chr10 134989077 134989383 -5327382 - AluSc SINE Alu -3 306 1 3650 172 11 37 chr10 134989383 134989425 -5327340 - L1MB3 LINE L1 -694 5489 5447 202 153 51 17 chr10 134989425 134989445 -5327320 + (TA)n Simple_repeat Simple_repeat 43 61 0 207 264 38 0 chr10 134990783 134990836 -5325929 + MIR SINE MIR 65 119 -89 280 241 89 25 chr10 134990837 134990916 -5325849 + MER5A DNA MER1_type 48 131 -58 717 292 68 17 chr10 134994337 134994573 -5322192 - MIR SINE MIR -3 259 12 210 225 7 70 chr10 134995293 134995435 -5321330 + (GTGTG)n Simple_repeat Simple_repeat 1 133 0 324 199 11 90 chr10 134995459 134995819 -5320946 + (GTGTG)n Simple_repeat Simple_repeat 1 331 0 21 0 0 0 chr10 134996423 134996444 -5320321 + AT_rich Low_complexity Low_complexity 1 21 0 208 370 95 5 chr10 134997918 134998107 -5318658 - MIR SINE MIR -54 208 3 671 222 104 47 chr10 134998577 134998760 -5318005 + MER58A DNA MER1_type 1 199 -2221 2343 127 15 0 chr10 134998760 134999092 -5317673 + MER1B DNA MER1_type 1 337 0 671 222 104 47 chr10 134999092 134999120 -5317645 + MER58A DNA MER1_type 199 224 0 1691 72 8 34 chr10 135000638 135000874 -5315891 - MER30 DNA MER1_type 0 230 1 685 152 0 0 chr10 135001260 135001359 -5315406 - AluJb SINE Alu -20 292 194 835 155 0 7 chr10 135001360 135001508 -5315257 - L1MB3 LINE L1 -46 6137 5991 257 209 9 86 chr10 135001514 135001571 -5315194 - L1MB3 LINE L1 -162 6021 5974 2375 87 3 0 chr10 135001571 135001870 -5314895 - AluY SINE Alu -11 300 1 257 209 9 86 chr10 135001870 135001917 -5314848 - L1MB3 LINE L1 -209 5974 5925 183 286 0 0 chr10 135001974 135002016 -5314749 - MIR SINE MIR -3 259 218 1954 168 0 7 chr10 135003153 135003450 -5313315 + AluJb SINE Alu 1 295 -17 1113 212 88 89 chr10 135003689 135004283 -5312482 - L1MC5 LINE L1 -184 7777 7185 1907 162 10 0 chr10 135004519 135004809 -5311956 - AluJb SINE Alu -19 293 1 203 227 131 121 chr10 135005311 135005509 -5311256 - MIR SINE MIR -30 232 33 354 248 68 59 chr10 135005704 135005926 -5310839 - L1MC5 LINE L1 -225 7736 7513 218 205 0 0 chr10 135006129 135006168 -5310597 + GA-rich Low_complexity Low_complexity 1 39 0 1907 198 57 41 chr10 135006984 135007403 -5309362 - MSTB LTR MaLR 0 426 1 1103 201 108 11 chr10 135009989 135010268 -5306497 - MLT1C LTR MaLR -14 453 148 431 240 19 39 chr10 135010402 135010556 -5306209 - TAR1 Satellite telomeric -1927 184 34 * 2206 212 20 34 chr10 135010428 135010985 -5305780 - LTR60 LTR ERV1 -37 549 1 658 200 15 7 chr10 135010985 135011120 -5305645 - MLT1C LTR MaLR -254 136 1 1371 225 70 34 chr10 135011754 135012167 -5304598 - MLT1C LTR MaLR -34 433 6 2611 208 31 32 chr10 135012605 135013011 -5303754 + L1MB4 LINE L1 5562 5968 -212 2355 97 3 0 chr10 135013011 135013310 -5303455 + AluSx SINE Alu 13 312 0 2611 208 31 32 chr10 135013310 135013519 -5303246 + L1MB4 LINE L1 5968 6176 -4 23 54 0 0 chr10 135015833 135015870 -5300895 + AT_rich Low_complexity Low_complexity 1 37 0 324 244 0 0 chr10 135017481 135017571 -5299194 + (TTCA)n Simple_repeat Simple_repeat 3 92 0 824 241 11 16 chr10 135017784 135017975 -5298790 + MER58A DNA MER1_type 35 224 0 207 0 0 0 chr10 135019336 135019359 -5297406 + (CA)n Simple_repeat Simple_repeat 2 24 0 2057 91 36 4 chr10 135020418 135020692 -5296073 + AluSq SINE Alu 1 283 -30 89 34 0 0 chr10 135020708 135020825 -5295940 + AT_rich Low_complexity Low_complexity 1 117 0 381 233 12 74 chr10 135021310 135021473 -5295292 - MER106B DNA MER1_type 0 1059 907 1813 172 38 6 chr10 135022393 135022736 -5294029 + MLT2C1 LTR ERVL 3 356 -41 314 98 20 0 chr10 135023012 135023063 -5293702 + (TC)n Simple_repeat Simple_repeat 1 52 0 1126 208 46 50 chr10 135023621 135023673 -5293092 + L1MC4 LINE L1 6780 6831 -1211 1953 60 0 13 chr10 135023673 135023907 -5292858 + AluY SINE Alu 80 310 -1 1126 208 46 50 chr10 135023907 135024478 -5292287 + L1MC4 LINE L1 6831 7549 -493 1147 195 58 15 chr10 135024483 135024744 -5292021 + L1MB7 LINE L1 5908 6179 -5 695 296 118 0 chr10 135024751 135025055 -5291710 + L1MC4 LINE L1 7545 7884 -158 3322 120 32 45 chr10 135025967 135026699 -5290066 - LTR12 LTR ERV1 -119 2319 76 259 231 0 0 chr10 135026699 135026751 -5290014 - LTR30 LTR ERV1 -670 52 1 7707 24 0 0 chr10 135028273 135029713 -5287052 + L1PA4 LINE L1 4729 6168 0 183 183 70 56 chr10 135031313 135031384 -5285381 + L3 LINE CR1 567 638 -939 247 228 65 98 chr10 135032100 135032223 -5284542 - L2 LINE L2 -2835 479 361 322 170 18 45 chr10 135032426 135032538 -5284227 + GA-rich Low_complexity Low_complexity 2 110 0 2424 94 0 0 chr10 135032986 135033283 -5283482 - AluSg SINE Alu -13 297 1 195 204 23 0 chr10 135033447 135033491 -5283274 - MIR SINE MIR -59 203 159 338 234 32 144 chr10 135033601 135033789 -5282976 + MIR SINE MIR 13 179 -83 393 273 39 71 chr10 135034067 135034349 -5282416 - MLT1I LTR MaLR -29 380 108 877 236 0 8 chr10 135034523 135034769 -5281996 - L1M4 LINE L1 -2818 3328 3085 203 264 203 39 chr10 135034841 135035023 -5281742 - MIR SINE MIR 0 262 51 237 250 25 12 chr10 135036123 135036203 -5280562 + (TG)n Simple_repeat Simple_repeat 2 82 0 2413 92 0 3 chr10 135037029 135037333 -5279432 - AluSc SINE Alu -6 303 1 1121 68 0 0 chr10 135037333 135037466 -5279299 - AluSc SINE Alu -176 133 1 205 231 26 39 chr10 135039508 135039586 -5277179 + GA-rich Low_complexity Low_complexity 3 79 0 1822 238 135 48 chr10 135040287 135040893 -5275872 + MLT2F LTR ERVL 5 663 0 388 268 19 2 chr10 135040896 135041028 -5275737 + MLT-int LTR MaLR 4 136 -1235 818 172 0 25 chr10 135041099 135041256 -5275509 - Ricksha DNA DNA -532 2719 2567 748 246 48 52 chr10 135041257 135041546 -5275219 + MLT1F1-int LTR MaLR 314 601 -770 298 288 49 132 chr10 135041740 135042473 -5274292 + MLT1F1-int LTR MaLR 700 1371 0 2872 227 3 3 chr10 135042473 135043037 -5273728 + MLT1F1 LTR MaLR 1 564 -3 343 280 140 31 chr10 135043560 135043846 -5272919 - L1M4 LINE L1 -2913 3233 2917 2861 137 53 0 chr10 135043855 135044366 -5272399 - L1MA8 LINE L1 0 6291 5754 4550 68 7 0 chr10 135044437 135045015 -5271750 - L1PA8 LINE L1 -13 6159 5578 3017 148 12 7 chr10 135045020 135045648 -5271117 - L1MA8 LINE L1 -527 5764 5129 1413 201 49 15 chr10 135045648 135045976 -5270789 - MER44D DNA MER2_type 0 609 1 3017 148 12 7 chr10 135045976 135046236 -5270529 - L1MA8 LINE L1 -1162 5129 4872 23 0 0 0 chr10 135046364 135046387 -5270378 + AT_rich Low_complexity Low_complexity 1 23 0 297 247 11 0 chr10 135046442 135046531 -5270234 + (TA)n Simple_repeat Simple_repeat 1 90 0 382 321 84 48 chr10 135046537 135046848 -5269917 + L2 LINE L2 2945 3266 -6 561 152 11 0 chr10 135047269 135047361 -5269404 - L1MC1 LINE L1 0 6333 6241 209 293 40 40 chr10 135049779 135049854 -5266911 + L2 LINE L2 2223 2297 -1017 290 161 62 0 chr10 135049925 135050006 -5266759 + LTR33 LTR ERVL 37 122 -399 183 301 132 44 chr10 135050404 135050540 -5266225 + L2 LINE L2 2577 2724 -590 187 273 143 57 chr10 135050594 135050803 -5265962 + L2 LINE L2 2825 3051 -221 227 271 29 0 chr10 135050891 135050961 -5265804 - MIR SINE MIR -28 234 163 592 262 109 0 chr10 135051009 135051211 -5265554 - MER58A DNA MER1_type 0 224 1 323 279 201 12 chr10 135053523 135053767 -5262998 + LTR16A LTR ERVL 157 446 -4 370 317 19 6 chr10 135053767 135053928 -5262837 - L1ME LINE L1 -313 5808 5646 6134 189 75 12 chr10 135053942 135054172 -5262593 + Charlie1a DNA MER1_type 8 222 -2539 2030 148 0 3 chr10 135054172 135054470 -5262295 + AluSx SINE Alu 1 297 -15 6134 189 75 12 chr10 135054470 135055602 -5261163 + Charlie1a DNA MER1_type 222 1455 0 846 120 0 24 chr10 135056060 135056185 -5260580 - AluSg/x SINE Alu -15 295 174 319 162 22 1 chr10 135056706 135056837 -5259928 - L1ME LINE L1 -348 5773 5659 2745 13 3 19 chr10 135056850 135057162 -5259603 + AluYa5 SINE Alu 1 307 -4 274 332 31 39 chr10 135057163 135057422 -5259343 - L1M4 LINE L1 -1779 4367 4111 306 170 7 97 chr10 135057448 135057474 -5259291 - MLT1F LTR MaLR 0 548 521 1549 176 59 64 chr10 135057474 135057866 -5258899 + MLT1B LTR MaLR 1 390 0 306 170 7 97 chr10 135057866 135057939 -5258826 - MLT1F LTR MaLR -27 521 464 356 317 37 0 chr10 135057941 135058102 -5258663 - L1M4 LINE L1 -2128 4018 3852 234 279 183 0 chr10 135058150 135058254 -5258511 + L2 LINE L2 3141 3263 -9 25 0 0 0 chr10 135058780 135058805 -5257960 + AT_rich Low_complexity Low_complexity 1 25 0 203 184 0 0 chr10 135059001 135059039 -5257726 - MIR SINE MIR -133 75 38 431 256 143 0 chr10 135059388 135059521 -5257244 + MIR SINE MIR 105 256 -6 1943 193 49 61 chr10 135059556 135060048 -5256717 - MLT1D LTR MaLR 0 505 20 376 346 19 12 chr10 135060190 135060352 -5256413 + MIR SINE MIR 6 168 -94 2965 110 24 0 chr10 135060688 135061106 -5255659 + MSTC LTR MaLR 1 428 0 206 238 16 32 chr10 135061184 135061247 -5255518 + (CATATA)n Simple_repeat Simple_repeat 6 67 0 1671 182 20 36 chr10 135061312 135061679 -5255086 - MLT1A1 LTR MaLR -8 420 1 1322 225 48 6 chr10 135062880 135063191 -5253574 - L1MC2 LINE L1 -1 6343 6020 197 360 87 31 chr10 135065786 135065947 -5250818 - L2 LINE L2 -98 3174 3005 2949 184 16 32 chr10 135066138 135066763 -5250002 + L1MB3 LINE L1 5567 6181 -2 705 263 0 10 chr10 135066765 135066957 -5249808 + L1PB4 LINE L1 5975 6158 -8 232 175 0 79 chr10 135067288 135067351 -5249414 - MLT1I LTR MaLR -263 146 89 2320 86 0 0 chr10 135069271 135069561 -5247204 - AluSc SINE Alu -17 292 3 233 106 43 64 chr10 135069798 135069845 -5246920 + MLT1E2 LTR MaLR 18 63 -563 1903 221 97 8 chr10 135070025 135070499 -5246266 + MLT1E2 LTR MaLR 111 626 0 258 314 53 43 chr10 135070802 135071107 -5245658 + L1P LINE L1 3673 3972 -2174 2167 182 5 10 chr10 135071208 135071593 -5245172 - MLT1B LTR MaLR 0 390 8 1409 215 27 33 chr10 135071628 135072104 -5244661 + L1MB8 LINE L1 5566 6043 -135 443 315 30 39 chr10 135072803 135073006 -5243759 - MIR SINE MIR -11 251 51 186 43 0 0 chr10 135073212 135073235 -5243530 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 254 310 21 49 chr10 135074254 135074396 -5242369 - MER5A DNA MER1_type -36 153 16 453 284 35 24 chr10 135074508 135074677 -5242088 + MER5B DNA MER1_type 8 178 0 220 340 72 26 chr10 135074823 135074976 -5241789 - MIR3 SINE MIR -40 168 9 2563 44 0 0 chr10 135075770 135076063 -5240702 + AluY SINE Alu 1 293 -18 255 103 0 0 chr10 135076063 135076102 -5240663 + (TA)n Simple_repeat Simple_repeat 2 40 0 635 0 13 0 chr10 135076108 135076183 -5240582 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 25 31 0 0 chr10 135076483 135076515 -5240250 + AT_rich Low_complexity Low_complexity 1 32 0 2412 101 0 7 chr10 135077530 135077838 -5238927 + AluSx SINE Alu 1 306 -6 414 323 42 57 chr10 135077847 135078395 -5238370 + HAL1b LINE L1 41 580 -768 272 54 0 0 chr10 135078655 135078692 -5238073 + tRNA-Cys-TGC tRNA tRNA 1 37 -38 272 27 27 0 chr10 135078927 135078964 -5237801 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 2075 214 77 76 chr10 135078966 135079158 -5237607 + L1MC5 LINE L1 6615 6805 -1156 2151 122 51 28 chr10 135079158 135079510 -5237255 + THE1B LTR MaLR 2 361 -3 2075 214 77 76 chr10 135079510 135079820 -5236945 + L1MC5 LINE L1 6805 7113 -848 2074 100 14 4 chr10 135079820 135080101 -5236664 + AluSg SINE Alu 1 284 -26 2075 214 77 76 chr10 135080101 135080143 -5236622 + L1MC5 LINE L1 7113 7153 -808 182 0 0 97 chr10 135080143 135080174 -5236591 + (AAATG)n Simple_repeat Simple_repeat 5 32 0 2075 214 77 76 chr10 135080174 135080548 -5236217 + L1MC5 LINE L1 7153 7550 -411 292 276 61 17 chr10 135080767 135080904 -5235861 + MIR SINE MIR 2 145 -75 218 346 44 15 chr10 135081484 135081620 -5235145 - MIR SINE MIR -111 151 12 709 286 61 12 chr10 135082019 135082264 -5234501 + MIR SINE MIR 6 262 0 2445 278 77 83 chr10 135082467 135082635 -5234130 + L1MC5 LINE L1 5255 5423 -2385 2594 65 0 0 chr10 135082635 135082942 -5233823 + AluY SINE Alu 1 307 -4 2445 278 77 83 chr10 135082942 135085044 -5231721 + L1MC5 LINE L1 5423 7412 -396 337 307 32 48 chr10 135085216 135085405 -5231360 + MIR SINE MIR 51 236 -26 30 45 0 0 chr10 135085415 135085459 -5231306 + AT_rich Low_complexity Low_complexity 1 44 0 2382 103 0 3 chr10 135085814 135086126 -5230639 - AluY SINE Alu 0 311 1 207 0 0 0 chr10 135086349 135086372 -5230393 + (CAA)n Simple_repeat Simple_repeat 1 23 0 7751 138 18 2 chr10 135086477 135088400 -5228365 + L1PA15 LINE L1 3985 5940 -225 2230 99 3 13 chr10 135088412 135088724 -5228041 + AluSx SINE Alu 4 312 0 1373 154 0 13 chr10 135088765 135088998 -5227767 + L1PA15 LINE L1 5936 6165 0 392 335 17 0 chr10 135089419 135089595 -5227170 + MIR SINE MIR 74 252 -10 2828 141 46 11 chr10 135090694 135091171 -5225594 + MLT1D LTR MaLR 5 498 -7 478 260 67 7 chr10 135092342 135092492 -5224273 + MER117 DNA MER1_type 1 159 -38 200 358 66 26 chr10 135092538 135092689 -5224076 + L2 LINE L2 3104 3260 -12 250 321 69 25 chr10 135094590 135094749 -5222016 - L2 LINE L2 -924 2390 2225 297 0 0 0 chr10 135095863 135095896 -5220869 + (TG)n Simple_repeat Simple_repeat 1 33 0 369 266 14 29 chr10 135096262 135096401 -5220364 + MARNA DNA Mariner 208 344 -242 448 234 169 60 chr10 135096889 135097137 -5219628 - ORSL DNA AcHobo 0 275 1 2127 107 4 0 chr10 135097440 135097721 -5219044 + AluSx SINE Alu 15 296 -16 716 220 19 19 chr10 135098637 135098796 -5217969 + MER45A DNA AcHobo 4 162 -16 700 161 155 42 chr10 135098854 135099047 -5217718 - MIR SINE MIR -32 230 16 1421 82 65 73 chr10 135100496 135100728 -5216037 - MER30 DNA MER1_type 0 230 1 213 231 33 88 chr10 135102600 135102657 -5214108 + MIR SINE MIR 104 156 -106 2144 118 48 31 chr10 135102657 135103013 -5213752 - THE1B LTR MaLR 0 364 3 213 231 33 88 chr10 135103013 135103046 -5213719 + MIR SINE MIR 156 189 -73 222 317 12 0 chr10 135106622 135106704 -5210061 + L2 LINE L2 3190 3272 0 1890 103 17 31 chr10 135106833 135107124 -5209641 + AluSc SINE Alu 13 299 -10 315 193 0 0 chr10 135107451 135107508 -5209257 - HsTC2 DNA Tc2 0 1898 1842 221 296 74 9 chr10 135107558 135107666 -5209099 + L2 LINE L2 2682 2796 -518 299 111 79 16 chr10 135107774 135107837 -5208928 - MER104 DNA Tc2 -46 134 68 978 193 18 41 chr10 135107905 135108123 -5208642 + MER20 DNA MER1_type 2 214 -5 353 234 13 0 chr10 135108159 135108236 -5208529 + MER20 DNA MER1_type 138 215 -4 192 77 0 0 chr10 135108969 135108995 -5207770 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 414 0 0 0 chr10 135109955 135110001 -5206764 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 5977 98 0 6 chr10 135110002 135110374 -5206391 - L1PB1 LINE L1 -6 6145 5772 333 0 0 0 chr10 135110374 135110411 -5206354 + (TA)n Simple_repeat Simple_repeat 2 38 0 5977 98 0 6 chr10 135110411 135111264 -5205501 - L1PB1 LINE L1 -379 5772 4924 328 212 30 61 chr10 135111510 135111609 -5205156 - MLT1H LTR MaLR -33 516 421 290 214 12 0 chr10 135112308 135112392 -5204373 + CT-rich Low_complexity Low_complexity 1 85 0 311 283 20 10 chr10 135112392 135112491 -5204274 - MLT1K LTR MaLR -165 423 324 3541 254 102 63 chr10 135112521 135114514 -5202251 - HAL1 LINE L1 -1 2506 421 1654 156 26 36 chr10 135114514 135114816 -5201949 + AluJo SINE Alu 9 307 -5 3541 254 102 63 chr10 135114816 135114980 -5201785 - HAL1 LINE L1 -2086 421 265 276 30 0 0 chr10 135115062 135115095 -5201670 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 57 0 0 chr10 135115907 135115942 -5200823 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2119 88 3 25 chr10 135115945 135116229 -5200536 - AluSx SINE Alu -34 278 1 21 71 0 0 chr10 135117297 135117339 -5199426 + AT_rich Low_complexity Low_complexity 1 42 0 199 310 14 0 chr10 135119140 135119211 -5197554 + MIR3 SINE MIR 120 191 -17 273 206 219 0 chr10 135123760 135123833 -5192932 - L2 LINE L2 0 3313 3225 220 250 17 0 chr10 135123881 135123941 -5192824 + (TA)n Simple_repeat Simple_repeat 1 61 0 465 256 111 6 chr10 135124051 135124231 -5192534 - L2 LINE L2 -413 2901 2703 3180 86 35 2 chr10 135124628 135125058 -5191707 + MLT2A1 LTR ERVL 1 444 0 368 291 30 48 chr10 135126162 135126327 -5190438 - MIR SINE MIR -48 214 53 1339 284 52 25 chr10 135126370 135126775 -5189990 - MLT1E LTR MaLR -176 417 2 2522 125 8 8 chr10 135126927 135127302 -5189463 - THE1C LTR MaLR 0 375 1 671 239 22 87 chr10 135127418 135127648 -5189117 - MIR SINE MIR -15 247 33 480 288 53 22 chr10 135128401 135128627 -5188138 + MIR SINE MIR 18 250 -12 1468 225 45 19 chr10 135128886 135129325 -5187440 + MER89 LTR ERV1 1 550 -9 373 353 74 0 chr10 135129728 135129972 -5186793 - L1MC/D LINE L1 -1997 5811 5550 361 304 61 9 chr10 135129997 135130211 -5186554 - L1MC/D LINE L1 -2330 5478 5254 195 184 0 0 chr10 135130603 135130641 -5186124 + CT-rich Low_complexity Low_complexity 4 41 0 322 263 242 16 chr10 135130657 135130851 -5185914 - MIR SINE MIR -3 259 22 222 287 139 9 chr10 135130925 135131040 -5185725 + MIR3 SINE MIR 74 203 -5 647 308 182 15 chr10 135131779 135132257 -5184508 + MLT1K LTR MaLR 12 569 -19 585 243 39 8 chr10 135133485 135133686 -5183079 + MIR SINE MIR 45 249 -13 213 39 0 0 chr10 135133742 135133768 -5182997 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1994 159 0 22 chr10 135133906 135134221 -5182544 - AluSx SINE Alu -4 308 1 212 184 0 0 chr10 135135416 135135454 -5181311 + GA-rich Low_complexity Low_complexity 2 39 0 211 306 81 48 chr10 135137562 135137686 -5179079 + L2 LINE L2 3186 3313 0 207 305 53 32 chr10 135137893 135137988 -5178777 + L3b LINE CR1 1286 1382 -201 5017 288 89 60 chr10 135138022 135138274 -5178491 + HAL1 LINE L1 1 244 -2263 2042 152 3 0 chr10 135138274 135138570 -5178195 + AluSx SINE Alu 1 297 -15 5017 288 89 60 chr10 135138570 135140754 -5176011 + HAL1 LINE L1 244 2507 0 256 244 143 0 chr10 135141567 135141703 -5175062 + MIR SINE MIR 45 206 -56 289 276 42 12 chr10 135141899 135141996 -5174769 - MIR SINE MIR -72 136 34 397 231 8 16 chr10 135145434 135145555 -5171210 + MIR3 SINE MIR 81 200 -8 1544 96 28 0 chr10 135146241 135146459 -5170306 + L1MA1 LINE L1 6079 6302 0 556 219 134 27 chr10 135147690 135147836 -5168929 - L1ME4a LINE L1 -25 6096 5967 2278 58 0 0 chr10 135147836 135148137 -5168628 + AluY SINE Alu 6 306 0 556 219 134 27 chr10 135148137 135148281 -5168484 - L1ME4a LINE L1 -154 5967 5774 266 208 2 0 chr10 135148281 135148345 -5168420 - L1ME LINE L1 -307 5814 5750 375 298 19 25 chr10 135148391 135148549 -5168216 - L1ME LINE L1 -364 5757 5601 244 255 57 98 chr10 135148557 135148697 -5168068 - L1MC4 LINE L1 0 8042 7898 261 0 0 0 chr10 135148697 135148726 -5168039 + (CA)n Simple_repeat Simple_repeat 1 29 0 244 255 57 98 chr10 135148726 135148954 -5167811 - L1MC4 LINE L1 -144 7898 7689 2361 245 48 27 chr10 135149053 135150311 -5166454 - L1ME1 LINE L1 -5 6161 4872 885 114 16 0 chr10 135151064 135151187 -5165578 - FLAM_C SINE Alu -18 125 1 227 302 155 17 chr10 135151479 135151595 -5165170 - L2 LINE L2 -1 3271 3140 181 197 148 16 chr10 135151855 135151916 -5164849 - L3 LINE CR1 -872 705 637 367 218 48 48 chr10 135152476 135152623 -5164142 - MLT1J LTR MaLR -364 147 1 534 301 75 61 chr10 135152712 135153154 -5163611 + LTR16C LTR ERVL 29 476 -15 273 68 0 0 chr10 135153723 135153767 -5162998 + L1MA3 LINE L1 6262 6305 0 227 143 0 0 chr10 135154581 135154616 -5162149 + U2 snRNA snRNA 1 35 -153 3271 30 0 5 chr10 135155299 135155692 -5161073 + L1PA3 LINE L1 5765 6155 0 214 248 104 64 chr10 135156663 135156865 -5159900 - L2 LINE L2 -1607 1707 1498 290 259 19 46 chr10 135157198 135157306 -5159459 - L2 LINE L2 -874 2440 2336 2345 158 25 18 chr10 135157306 135157682 -5159083 + L1MC1 LINE L1 5880 6261 -72 2238 122 16 44 chr10 135157682 135158068 -5158697 - THE1C LTR MaLR 0 375 1 2345 158 25 18 chr10 135158068 135158134 -5158631 + L1MC1 LINE L1 6261 6325 -8 259 256 46 88 chr10 135158237 135158542 -5158223 + L1ME LINE L1 5288 5579 -587 189 74 0 0 chr10 135158926 135158953 -5157812 + (CTG)n Simple_repeat Simple_repeat 1 27 0 222 207 0 0 chr10 135159396 135159454 -5157311 + A-rich Low_complexity Low_complexity 2 59 0 3070 144 21 23 chr10 135160707 135161268 -5155497 + L1PB3 LINE L1 5594 6153 -1 5837 62 0 0 chr10 135162606 135163335 -5153430 - L1PA8 LINE L1 -2 6170 5442 251 283 159 0 chr10 135163597 135163710 -5153055 + MIR SINE MIR 127 257 -5 643 83 0 0 chr10 135163712 135163796 -5152969 - AluJ/FLAM SINE Alu -228 84 1 470 239 49 81 chr10 135165147 135165394 -5151371 + MLT1K LTR MaLR 311 549 -39 1281 209 7 3 chr10 135167995 135168301 -5148464 - MER33 DNA MER1_type -17 307 1 295 227 0 13 chr10 135168309 135168384 -5148381 - MER69 DNA AcHobo -327 2199 2126 1027 191 43 0 chr10 135168412 135168643 -5148122 - MER69 DNA AcHobo -445 2081 1841 1301 58 0 0 chr10 135168737 135168892 -5147873 + AluY SINE Alu 155 309 -2 1820 272 18 18 chr10 135169019 135169533 -5147232 + LTR40a LTR ERVL 6 519 0 637 250 177 0 chr10 135169642 135169902 -5146863 - MER69 DNA AcHobo -2168 358 53 1642 194 22 82 chr10 135170600 135170703 -5146062 - MLT1D LTR MaLR 0 505 397 2269 164 44 13 chr10 135170703 135171178 -5145587 + L1MA9 LINE L1 5823 6312 0 1642 194 22 82 chr10 135171178 135171610 -5145155 - MLT1D LTR MaLR -108 397 2 2572 56 0 0 chr10 135172010 135172316 -5144449 + AluY SINE Alu 1 306 -5 2292 98 0 13 chr10 135172747 135173052 -5143713 - AluSx SINE Alu -9 303 3 603 218 39 0 chr10 135173071 135173227 -5143538 - L1ME2 LINE L1 -15 6149 5988 2953 196 32 28 chr10 135173250 135173968 -5142797 - L1MD1 LINE L1 -6 6236 5516 533 172 0 0 chr10 135173960 135174047 -5142718 - L1MDa LINE L1 -6283 257 171 * 1285 166 64 95 chr10 135174047 135174516 -5142249 - MER66A LTR ERV1 0 478 100 581 255 7 13 chr10 135174605 135174758 -5142007 - L1MDa LINE L1 -6370 170 19 1210 233 20 45 chr10 135174781 135175180 -5141585 - L1ME3 LINE L1 -9 6153 5765 233 290 131 19 chr10 135176067 135176174 -5140591 - MIR SINE MIR -60 148 30 2394 218 114 19 chr10 135176618 135177020 -5139745 - L1MCa LINE L1 -5069 976 614 216 0 0 0 chr10 135177020 135177044 -5139721 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2394 218 114 19 chr10 135177044 135177604 -5139161 - L1MCa LINE L1 -5431 614 4 349 275 112 24 chr10 135177647 135177934 -5138831 - L1MC5 LINE L1 -101 7860 7549 352 244 35 0 chr10 135178032 135178118 -5138647 - L1MC4 LINE L1 -1339 6772 6684 1326 152 164 30 chr10 135178198 135178527 -5138238 + THE1C LTR MaLR 3 375 0 574 241 41 24 chr10 135178615 135178785 -5137980 - MER101 LTR ERV1 -71 403 231 413 293 148 23 chr10 135179007 135179270 -5137495 - L1MC4 LINE L1 -1908 5969 5674 433 215 0 9 chr10 135179275 135179382 -5137383 - L1MA10 LINE L1 -3 6331 6226 2260 249 18 22 chr10 135179396 135180226 -5136539 - L1MC4 LINE L1 -2700 3515 2689 505 222 40 0 chr10 135180226 135180352 -5136413 + L1MEc LINE L1 2320 2450 -3946 1047 220 4 4 chr10 135180369 135180624 -5136141 - L1MC4 LINE L1 -3554 2661 2407 516 266 72 13 chr10 135180624 135180861 -5135904 - L1MC4 LINE L1 -5076 1320 1070 222 261 261 11 chr10 135181201 135181293 -5135472 + L2 LINE L2 3134 3248 -24 2129 135 0 6 chr10 135181299 135181611 -5135154 - AluSx SINE Alu -2 310 1 1785 171 12 0 chr10 135182206 135182551 -5134214 + L1MC3 LINE L1 7437 7785 0 368 318 172 13 chr10 135182874 135183176 -5133589 - L1ME4a LINE L1 -287 5834 5485 424 326 5 31 chr10 135183949 135184142 -5132623 - MIR SINE MIR -19 243 56 2115 128 0 0 chr10 135184681 135184977 -5131788 - AluSx SINE Alu -16 296 1 294 390 42 26 chr10 135184982 135185246 -5131519 + L2 LINE L2 2997 3264 -8 530 309 98 29 chr10 135186640 135187060 -5129705 + MLT1K LTR MaLR 108 556 -32 231 261 33 43 chr10 135187089 135187181 -5129584 + L2 LINE L2 3162 3252 -61 653 172 134 19 chr10 135187189 135187346 -5129419 - AluJo SINE Alu -15 297 123 24 67 0 0 chr10 135187792 135187837 -5128928 + AT_rich Low_complexity Low_complexity 1 45 0 5705 233 93 18 chr10 135188532 135190406 -5126359 - L1ME LINE L1 -405 5761 4029 282 56 0 0 chr10 135190406 135190442 -5126323 + (TG)n Simple_repeat Simple_repeat 2 37 0 5705 233 93 18 chr10 135190442 135190651 -5126114 - L1ME LINE L1 -2137 4029 3837 195 42 0 0 chr10 135190651 135190675 -5126090 + (TG)n Simple_repeat Simple_repeat 1 24 0 5705 233 93 18 chr10 135190675 135191140 -5125625 - L1ME LINE L1 -2329 3837 3023 805 277 10 0 chr10 135191131 135191423 -5125342 - L1ME LINE L1 -3467 2679 2385 * 1380 244 27 9 chr10 135191422 135191872 -5124893 + L1MEc LINE L1 674 1131 -5265 2860 184 15 36 chr10 135191873 135192543 -5124222 - L1MC3 LINE L1 -1318 6467 5812 21 0 0 0 chr10 135192641 135192662 -5124103 + AT_rich Low_complexity Low_complexity 1 21 0 678 375 86 16 chr10 135192664 135193466 -5123299 + L2 LINE L2 2414 3272 0 196 303 169 0 chr10 135193476 135193565 -5123200 + MIR SINE MIR 12 115 -147 6040 144 23 19 chr10 135193573 135195146 -5121619 - L1MA4A LINE L1 0 7005 5410 5162 103 91 31 chr10 135195146 135196243 -5120522 - MER11A LTR ERVK 0 1266 1 15084 177 20 22 chr10 135196244 135198741 -5118024 - L1MA4A LINE L1 -1434 5414 2913 2103 112 17 7 chr10 135198741 135199028 -5117737 - AluSq SINE Alu -23 290 1 15084 177 20 22 chr10 135199028 135199608 -5117157 - L1MA4A LINE L1 -3935 2913 2333 2060 110 161 13 chr10 135199608 135199981 -5116784 - MSTA LTR MaLR 0 428 1 8644 144 40 40 chr10 135199981 135201557 -5115208 - MSTA-int LTR MaLR 0 1580 5 2021 148 125 13 chr10 135201561 135201946 -5114819 - MSTA LTR MaLR 0 428 1 15084 177 20 22 chr10 135201946 135204293 -5112472 - L1MA4A LINE L1 -4517 2331 2 21 36 0 0 chr10 135204507 135204535 -5112230 + AT_rich Low_complexity Low_complexity 1 28 0 2465 86 0 0 chr10 135204962 135205266 -5111499 - AluY SINE Alu -5 306 3 385 339 52 17 chr10 135205951 135206148 -5110617 - HAL1 LINE L1 -844 1663 1455 2344 111 33 22 chr10 135206148 135206508 -5110257 + THE1B LTR MaLR 1 364 0 385 339 52 17 chr10 135206508 135206540 -5110225 - HAL1 LINE L1 -1052 1455 1426 228 35 0 0 chr10 135206985 135207014 -5109751 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2171 246 109 30 chr10 135207189 135207666 -5109099 - Charlie2a DNA MER1_type -25 2837 2399 1658 187 0 16 chr10 135207666 135207971 -5108794 + AluJo SINE Alu 1 300 -12 2171 246 109 30 chr10 135207971 135208743 -5108022 - Charlie2a DNA MER1_type -463 2399 1490 1779 221 26 14 chr10 135208777 135209198 -5107567 - MLT1C LTR MaLR -6 461 36 270 232 21 0 chr10 135209240 135209335 -5107430 - Charlie2a DNA MER1_type -1386 1476 1380 600 292 17 0 chr10 135209443 135209621 -5107144 + L1MC/D LINE L1 5496 5676 -2132 40 49 0 0 chr10 135209707 135209768 -5106997 + AT_rich Low_complexity Low_complexity 1 61 0 1263 232 59 44 chr10 135209769 135210144 -5106621 - Charlie2a DNA MER1_type -1586 1276 889 1574 159 8 102 chr10 135210144 135210546 -5106219 + MLT1A1 LTR MaLR 2 365 0 1263 232 59 44 chr10 135210546 135210675 -5106090 - Charlie2a DNA MER1_type -1973 889 764 1328 273 45 20 chr10 135210684 135211023 -5105742 + L1MC4a LINE L1 5496 5854 -1954 1194 212 130 13 chr10 135211023 135211088 -5105677 - MER2 DNA MER2_type 0 344 288 180 0 0 0 chr10 135211088 135211108 -5105657 + (TA)n Simple_repeat Simple_repeat 1 20 0 1194 212 130 13 chr10 135211108 135211349 -5105416 - MER2 DNA MER2_type -56 288 2 1328 273 45 20 chr10 135211349 135211514 -5105251 + L1MC4a LINE L1 5854 6013 -1795 307 253 187 28 chr10 135211525 135211707 -5105058 + L1MC4a LINE L1 6054 6264 -1544 297 213 55 70 chr10 135211773 135211928 -5104837 + L1MC4a LINE L1 6701 6780 -1028 2286 241 43 27 chr10 135211934 135212793 -5103972 + L1ME1 LINE L1 4356 5228 -918 226 157 86 0 chr10 135212874 135212944 -5103821 + (TA)n Simple_repeat Simple_repeat 2 77 0 3000 225 55 13 chr10 135212944 135213828 -5102937 + L1ME1 LINE L1 5237 6162 -4 313 230 0 23 chr10 135213840 135213938 -5102827 + L1MC4 LINE L1 6852 7002 -866 1068 225 92 28 chr10 135213950 135214417 -5102348 + L1MC5 LINE L1 7305 7801 -160 366 302 56 0 chr10 135214433 135214559 -5102206 - MIR SINE MIR -48 214 82 5256 192 51 10 chr10 135214587 135215688 -5101077 - ERVL LTR ERVL -3553 2211 1066 370 321 16 96 chr10 135216369 135216556 -5100209 + L1ME LINE L1 5603 5774 -347 2081 116 0 45 chr10 135216556 135216866 -5099899 - AluSx SINE Alu -16 296 1 2107 104 46 52 chr10 135218503 135218869 -5097896 - THE1B LTR MaLR 0 364 1 192 347 74 11 chr10 135219067 135219162 -5097603 - L2 LINE L2 -4 3268 3168 830 121 0 34 chr10 135219206 135219355 -5097410 + L1MB2 LINE L1 6028 6171 0 1075 253 98 14 chr10 135219373 135219740 -5097025 + MLT1F1 LTR MaLR 11 408 -159 306 214 318 8 chr10 135219900 135220026 -5096739 + L1MDb LINE L1 562 726 -5683 239 182 0 0 chr10 135220094 135220138 -5096627 + MLT1F1 LTR MaLR 543 586 -9 554 153 0 0 chr10 135220305 135220390 -5096375 - AluJ/FLAM SINE Alu -227 85 1 345 331 68 18 chr10 135220617 135220780 -5095985 - MIR3 SINE MIR -15 193 23 207 254 0 0 chr10 135221423 135221486 -5095279 + CT-rich Low_complexity Low_complexity 2 64 0 500 284 85 100 chr10 135221741 135222444 -5094321 - HAL1 LINE L1 -975 1532 840 616 281 117 18 chr10 135223363 135223644 -5093121 - L2 LINE L2 0 3313 3005 350 300 9 0 chr10 135224225 135224335 -5092430 + LTR16C LTR ERVL 381 491 0 297 318 97 57 chr10 135224771 135224947 -5091818 + L3 LINE CR1 470 652 -925 336 280 113 65 chr10 135225084 135225297 -5091468 - MIR SINE MIR -6 256 15 246 275 18 46 chr10 135225297 135225406 -5091359 + MER5A DNA MER1_type 1 106 -83 284 248 289 33 chr10 135225553 135225823 -5090942 + Charlie2 DNA MER1_type 7 345 -2517 * 2126 216 111 45 chr10 135225796 135225876 -5090889 + Charlie2 DNA MER1_type 1856 1929 -933 2357 96 7 0 chr10 135225876 135226177 -5090588 - AluSx SINE Alu -9 303 1 2126 216 111 45 chr10 135226177 135226511 -5090254 + Charlie2 DNA MER1_type 1929 2240 -622 1565 158 68 7 chr10 135226511 135226790 -5089975 + AluJo SINE Alu 1 296 -16 2126 216 111 45 chr10 135226790 135227319 -5089446 + Charlie2 DNA MER1_type 2240 2862 0 192 163 0 0 chr10 135227901 135227944 -5088821 + T-rich Low_complexity Low_complexity 1 43 0 7441 28 0 2 chr10 135227967 135229207 -5087558 - L1PA3 LINE L1 -3 6152 4905 228 167 0 0 chr10 135229928 135229976 -5086789 + (TG)n Simple_repeat Simple_repeat 1 48 0 226 286 160 25 chr10 135230704 135230855 -5085910 + MIR3 SINE MIR 6 170 -58 21 0 0 0 chr10 135231675 135231696 -5085069 + AT_rich Low_complexity Low_complexity 1 21 0 389 234 23 27 chr10 135232219 135232347 -5084418 - L1MCa LINE L1 -1339 6983 1994 585 288 40 46 chr10 135233487 135234011 -5082754 + HAL1b LINE L1 59 579 -769 306 250 42 111 chr10 135234300 135234746 -5082019 + L1M4c LINE L1 2256 2673 -3709 25 0 0 0 chr10 135234803 135234828 -5081937 + AT_rich Low_complexity Low_complexity 1 25 0 6847 45 7 0 chr10 135234828 135235711 -5081054 - L1PA6 LINE L1 -3 6151 5263 1331 60 0 0 chr10 135235709 135235894 -5080871 + L1PA6 LINE L1 5088 5272 -874 * 5039 171 55 5 chr10 135236110 135237082 -5079683 + Tigger7 DNA MER2_type 4 1023 -1464 444 179 0 0 chr10 135237086 135237164 -5079601 + Tigger7 DNA MER2_type 2503 2580 -7 316 309 85 31 chr10 135237176 135237202 -5079563 + L1M4c LINE L1 2924 2947 -3435 1328 176 99 59 chr10 135237202 135237577 -5079188 + MLT1B LTR MaLR 1 390 0 316 309 85 31 chr10 135237577 135238384 -5078381 + L1M4c LINE L1 2947 3802 -2580 654 261 22 14 chr10 135238474 135238696 -5078069 + L1ME3 LINE L1 3587 3810 -2572 768 255 0 0 chr10 135238700 135238849 -5077916 + AluJb SINE Alu 137 285 -27 385 324 38 5 chr10 135238916 135239126 -5077639 + L1ME3 LINE L1 3808 4024 -2358 1847 221 112 32 chr10 135239126 135239649 -5077116 + L1ME3 LINE L1 4865 5345 -1053 2160 103 7 0 chr10 135239649 135239930 -5076835 + AluSx SINE Alu 4 286 -26 348 24 0 0 chr10 135239937 135239978 -5076787 + (CA)n Simple_repeat Simple_repeat 2 42 0 1847 221 112 32 chr10 135239978 135240155 -5076610 + L1ME3 LINE L1 5350 5511 -887 2196 118 7 0 chr10 135240155 135240459 -5076306 + AluSg SINE Alu 3 308 -2 1847 221 112 32 chr10 135240459 135241152 -5075613 + L1ME3 LINE L1 5511 6396 -2 265 227 100 0 chr10 135241157 135241267 -5075498 + L1ME3 LINE L1 1623 1743 -4653 459 320 43 28 chr10 135241317 135241570 -5075195 + L1ME3 LINE L1 1847 2103 -4293 183 80 0 0 chr10 135241584 135241609 -5075156 + (TA)n Simple_repeat Simple_repeat 1 25 0 3133 263 35 27 chr10 135241611 135242916 -5073849 + L1ME3 LINE L1 2093 3374 -2841 2046 146 3 16 chr10 135242916 135243232 -5073533 + AluJb SINE Alu 1 312 0 3133 263 35 27 chr10 135243232 135243531 -5073234 + L1ME3 LINE L1 3374 3669 -2546 444 269 76 15 chr10 135243590 135243787 -5072978 + L1ME3 LINE L1 4798 5006 -1209 677 211 83 6 chr10 135243787 135243967 -5072798 - MLT1A1 LTR MaLR 0 365 172 503 312 64 8 chr10 135244125 135244375 -5072390 - L1M4 LINE L1 -3092 3054 2791 364 43 0 0 chr10 135244375 135244449 -5072316 + AluY SINE Alu 242 315 0 1718 252 65 5 chr10 135244451 135245002 -5071763 + L1ME3 LINE L1 5648 6231 0 463 298 21 5 chr10 135245034 135245222 -5071543 + L1MEc LINE L1 1627 1817 -4579 262 287 58 50 chr10 135245223 135245385 -5071380 + L1MEc LINE L1 1856 2022 -4374 2085 132 23 6 chr10 135245385 135245734 -5071031 - THE1A LTR MaLR 0 355 1 262 287 58 50 chr10 135245734 135245832 -5070933 + L1MEc LINE L1 2022 2118 -4278 1597 160 41 44 chr10 135246041 135246334 -5070431 + AluJo SINE Alu 1 292 -20 1149 215 49 37 chr10 135246489 135247002 -5069763 + MER34C LTR ERV1 11 585 0 186 103 0 0 chr10 135250314 135250343 -5066422 + (ATGGTG)n Simple_repeat Simple_repeat 1 29 0 278 303 42 25 chr10 135250541 135250660 -5066105 + L1ME LINE L1 5538 5658 -463 1654 181 234 8 chr10 135251257 135251638 -5065127 - MLT1C LTR MaLR 0 467 1 194 242 0 0 chr10 135252526 135252559 -5064206 - L2 LINE L2 -37 3276 3244 302 181 49 98 chr10 135252834 135253021 -5063744 + LTR33A LTR ERVL 353 532 -25 2072 139 0 0 chr10 135253026 135253342 -5063423 - AluSx SINE Alu 0 316 1 225 296 43 61 chr10 135254108 135254223 -5062542 - MIR SINE MIR -65 143 31 2517 114 23 26 chr10 135255164 135255549 -5061216 - Tigger2 DNA MER2_type 0 2718 2335 1811 112 77 0 chr10 135255595 135255854 -5060911 + AluSx SINE Alu 1 279 -33 656 232 26 0 chr10 135255880 135256035 -5060730 + Charlie8 DNA MER1_type 118 276 -2141 217 280 86 54 chr10 135256279 135256372 -5060393 + MIR3 SINE MIR 99 194 -14 382 295 37 47 chr10 135258703 135258893 -5057872 + MIR SINE MIR 61 248 -14 195 42 0 0 chr10 135259441 135259465 -5057300 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 464 290 108 59 chr10 135259491 135260047 -5056718 - L2 LINE L2 -42 3271 2694 1751 178 3 3 chr10 135260055 135260353 -5056412 + AluJb SINE Alu 1 298 -14 745 216 134 16 chr10 135260834 135261359 -5055406 - LTR50 LTR ERVL -5 790 12 269 107 71 18 chr10 135261360 135261416 -5055349 - L1M4 LINE L1 -825 5321 5263 1198 264 46 67 chr10 135261643 135262290 -5054475 - L1ME LINE L1 -5346 724 91 252 308 136 28 chr10 135262431 135262645 -5054120 - L1ME LINE L1 -516 5605 5369 393 337 43 28 chr10 135262650 135262905 -5053860 - L1ME LINE L1 -787 5359 5101 2152 122 0 0 chr10 135263298 135263586 -5053179 - AluSx SINE Alu -24 288 1 29 90 0 0 chr10 135264044 135264122 -5052643 + AT_rich Low_complexity Low_complexity 1 78 0 297 291 0 19 chr10 135264729 135264832 -5051933 + (TATATG)n Simple_repeat Simple_repeat 6 106 0 2195 127 0 13 chr10 135268007 135268322 -5048443 + AluSx SINE Alu 1 311 -1 919 290 93 60 chr10 135270151 135270512 -5046253 + HAL1 LINE L1 278 625 -1882 2181 109 0 13 chr10 135270512 135270814 -5045951 + AluSx SINE Alu 15 312 0 919 290 93 60 chr10 135270814 135271190 -5045575 + HAL1 LINE L1 625 1040 -1467 554 209 8 85 chr10 135271200 135271329 -5045436 + FLAM_C SINE Alu 2 120 -13 195 69 0 0 chr10 135271374 135271403 -5045362 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 207 0 0 0 chr10 135271402 135271425 -5045340 + (GA)n Simple_repeat Simple_repeat 2 24 0 1067 162 5 35 chr10 135271425 135271623 -5045142 - AluJb SINE Alu -34 278 87 1465 296 74 23 chr10 135271643 135272387 -5044378 + HAL1 LINE L1 1072 1853 -654 366 23 0 0 chr10 135272427 135272470 -5044295 + (CA)n Simple_repeat Simple_repeat 2 44 0 391 268 178 27 chr10 135272568 135272900 -5043865 + HAL1 LINE L1 2012 2393 -114 21 57 0 0 chr10 135273178 135273213 -5043552 + AT_rich Low_complexity Low_complexity 1 35 0 502 324 49 20 chr10 135273272 135273519 -5043246 - MIR SINE MIR -2 260 7 34022 60 3 4 chr10 135273790 135278877 -5037888 + L1PA5 LINE L1 1071 6153 -1 1038 238 106 32 chr10 135279142 135279462 -5037303 + L1ME3A LINE L1 5475 5833 -337 195 42 0 0 chr10 135279462 135279486 -5037279 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1038 238 106 32 chr10 135279486 135279569 -5037196 + L1ME3A LINE L1 5833 5908 -262 2299 115 0 3 chr10 135280676 135280989 -5035776 - AluSx SINE Alu 0 312 1 251 290 147 45 chr10 135281208 135281432 -5035333 - MIR SINE MIR -2 260 14 523 308 62 33 chr10 135282961 135283172 -5033593 - MIR SINE MIR -33 229 13 868 273 88 43 chr10 135283470 135283584 -5033181 + L1MC4 LINE L1 6220 6327 -1566 2090 139 10 0 chr10 135283584 135283893 -5032872 + AluSx SINE Alu 1 312 0 868 273 88 43 chr10 135283893 135284495 -5032270 + L1MC4 LINE L1 6327 7068 -825 420 275 30 73 chr10 135284559 135284998 -5031767 + L1MC4 LINE L1 7000 7428 -614 2201 92 0 71 chr10 135285062 135285399 -5031366 + AluSq SINE Alu 1 313 0 1830 189 56 22 chr10 135285402 135285418 -5031347 + MER95 LTR ERV 6 20 -411 2284 98 0 31 chr10 135285418 135285736 -5031029 + AluSg SINE Alu 1 308 -2 1830 189 56 22 chr10 135285736 135286127 -5030638 + MER95 LTR ERV 20 427 -4 2032 110 17 28 chr10 135286394 135286684 -5030081 - AluSx SINE Alu -25 287 1 307 80 0 0 chr10 135286745 135286795 -5029970 + AluSp/q SINE Alu 254 303 0 19999 151 27 23 chr10 135286829 135294500 -5022265 + L1MA1 LINE L1 12 7712 -9 21 0 0 0 chr10 135294501 135294522 -5022243 + AT_rich Low_complexity Low_complexity 1 21 0 292 240 177 73 chr10 135294531 135294848 -5021917 + L1MC4 LINE L1 7594 7943 -99 21 0 0 0 chr10 135294897 135294918 -5021847 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 135295151 135295172 -5021593 + (GA)n Simple_repeat Simple_repeat 2 22 0 481 274 70 6 chr10 135295214 135295371 -5021394 - MIR SINE MIR -49 213 47 15681 122 22 15 chr10 135295530 135296134 -5020631 - Tigger1 DNA MER2_type 0 2418 1820 3471 70 5 0 chr10 135296134 135296560 -5020205 - L1PA10 LINE L1 -4 6164 5737 15681 122 22 15 chr10 135296560 135298332 -5018433 - Tigger1 DNA MER2_type -598 1820 24 596 281 205 43 chr10 135298816 135298890 -5017875 - L2 LINE L2 -542 2772 2711 2534 199 103 24 chr10 135298890 135299244 -5017521 - MLT1E3 LTR MaLR -4 620 202 2155 131 0 3 chr10 135299244 135299549 -5017216 + AluSx SINE Alu 1 304 -8 2534 199 103 24 chr10 135299549 135299767 -5016998 - MLT1E3 LTR MaLR -422 202 3 596 281 205 43 chr10 135299767 135300145 -5016620 - L2 LINE L2 -603 2711 2396 869 231 79 0 chr10 135300145 135300348 -5016417 + MER20 DNA MER1_type 1 219 0 596 281 205 43 chr10 135300348 135300730 -5016035 - L2 LINE L2 -918 2396 1777 22 35 0 0 chr10 135304392 135304421 -5012344 + GC_rich Low_complexity Low_complexity 1 29 0 303 171 80 11 chr10 135304952 135305040 -5011725 + MIR SINE MIR 79 172 -90 720 161 5 0 chr10 135306673 135307121 -5009644 + (CA)n Simple_repeat Simple_repeat 1 450 0 210 71 0 0 chr10 135307686 135307714 -5009051 + (TG)n Simple_repeat Simple_repeat 2 29 0 297 0 0 0 chr10 135308951 135308984 -5007781 + (TG)n Simple_repeat Simple_repeat 2 34 0 183 233 70 0 chr10 135309638 135309681 -5007084 - MIR SINE MIR -113 149 104 224 100 25 0 chr10 135309785 135309825 -5006940 + (CA)n Simple_repeat Simple_repeat 1 41 0 430 251 71 37 chr10 135310857 135311062 -5005703 - MIR SINE MIR -33 229 16 194 241 0 56 chr10 135313394 135313448 -5003317 - MIR SINE MIR -68 140 90 13802 60 5 10 chr10 135313558 135316088 -5000677 - L1PA6 LINE L1 -15 6139 3619 471 178 0 0 chr10 135316481 135316554 -5000211 + Cheshire DNA MER1_type 33 105 -2315 2084 150 0 3 chr10 135316563 135316870 -4999895 + AluSx SINE Alu 3 308 -4 185 32 0 65 chr10 135316875 135316906 -4999859 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 627 295 20 5 chr10 135316908 135317108 -4999657 + Cheshire DNA MER1_type 102 304 -2116 1683 219 20 89 chr10 135317257 135317610 -4999155 + Cheshire DNA MER1_type 348 651 -1769 617 239 15 0 chr10 135317610 135317740 -4999025 + FLAM_A SINE Alu 2 133 0 1683 219 20 89 chr10 135317740 135317935 -4998830 + Cheshire DNA MER1_type 651 858 -1562 714 217 23 6 chr10 135317945 135318120 -4998645 + Cheshire DNA MER1_type 2243 2420 0 238 214 51 20 chr10 135318162 135318260 -4998505 + L1M4c LINE L1 2327 2427 -3957 938 298 107 40 chr10 135318274 135318977 -4997788 + L1M4c LINE L1 2449 3104 -3278 1675 176 24 10 chr10 135318977 135319267 -4997498 + AluJo SINE Alu 5 298 -14 938 298 107 40 chr10 135319267 135319439 -4997326 + L1M4c LINE L1 3104 3263 -3119 2259 111 13 0 chr10 135319439 135319558 -4997207 + AluSx SINE Alu 3 119 -193 216 0 0 0 chr10 135319558 135319582 -4997183 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2259 111 13 0 chr10 135319582 135319768 -4996997 + AluSx SINE Alu 119 312 0 938 298 107 40 chr10 135319768 135319879 -4996886 + L1M4c LINE L1 3263 3502 -2880 290 278 9 9 chr10 135320049 135320157 -4996608 + L2 LINE L2 2260 2367 -947 298 299 80 0 chr10 135321012 135321149 -4995616 - MER117 DNA MER1_type -49 148 1 203 340 100 0 chr10 135321153 135321253 -4995512 - MIR SINE MIR -70 138 29 1951 154 0 20 chr10 135321424 135321730 -4995035 + AluJb SINE Alu 5 304 -8 26 0 0 0 chr10 135321915 135321941 -4994824 + AT_rich Low_complexity Low_complexity 1 26 0 458 241 63 44 chr10 135321972 135322130 -4994635 - MIR SINE MIR -71 191 31 246 164 0 49 chr10 135323820 135323881 -4992884 + (TTATA)n Simple_repeat Simple_repeat 3 60 0 742 277 58 64 chr10 135324632 135324991 -4991774 + HAL1 LINE L1 2027 2384 -123 2277 118 46 96 chr10 135324991 135325448 -4991317 + Tigger2a DNA MER2_type 1 434 0 742 277 58 64 chr10 135325448 135325572 -4991193 + HAL1 LINE L1 2384 2507 0 2729 171 70 16 chr10 135326452 135327025 -4989740 - L1MC3 LINE L1 -14 7771 7168 1548 250 58 31 chr10 135327028 135327350 -4989415 - L1M4 LINE L1 -1199 4947 4599 1873 168 0 3 chr10 135327350 135327668 -4989097 - AluJb SINE Alu 0 317 1 1548 250 58 31 chr10 135327668 135327927 -4988838 - L1M4 LINE L1 -1547 4599 4349 1240 214 21 53 chr10 135327917 135328352 -4988413 - L1MCb LINE L1 -2845 3719 3299 * 1593 259 70 32 chr10 135328390 135328918 -4987847 + LTR26 LTR ERV1 54 601 -2 640 193 31 6 chr10 135329036 135329197 -4987568 - L1MCb LINE L1 -3269 3295 3131 4835 221 52 31 chr10 135329200 135329847 -4986918 - L1MCb LINE L1 -4851 1194 562 192 40 0 0 chr10 135329847 135329872 -4986893 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4835 221 52 31 chr10 135329872 135330482 -4986283 - L1MCb LINE L1 -5483 562 342 2615 151 13 0 chr10 135330482 135330880 -4985885 - MER57A LTR ERV1 0 403 1 4835 221 52 31 chr10 135330880 135331230 -4985535 - L1MCb LINE L1 -5703 342 1 213 255 0 0 chr10 135331297 135331348 -4985417 - L2 LINE L2 -67 3246 3196 4150 114 11 57 chr10 135333016 135333682 -4983083 - LTR8 LTR ERV1 0 691 57 2878 7 0 0 chr10 135334040 135334343 -4982422 - AluYa5 SINE Alu -8 303 1 384 145 370 22 chr10 135334574 135334712 -4982053 - MER53 DNA DNA -3 186 1 6825 147 13 2 chr10 135334865 135336884 -4979881 + L1PB1 LINE L1 4103 6144 -7 1975 178 47 74 chr10 135336972 135337501 -4979264 + MLT2B1 LTR ERVL 3 517 -3 26 50 0 0 chr10 135338829 135338869 -4977896 + AT_rich Low_complexity Low_complexity 1 40 0 1152 234 33 66 chr10 135341690 135342204 -4974561 + MER72 LTR ERV1 4 481 -190 546 260 92 12 chr10 135342278 135342451 -4974314 + MER87 LTR ERV1 354 540 -1 912 171 123 5 chr10 135342451 135342638 -4974127 + MER49 LTR ERV1 715 923 0 489 212 30 45 chr10 135342623 135342654 -4974111 + MER58C DNA MER1_type 86 116 -2304 * 225 0 0 0 chr10 135342654 135342679 -4974086 + (CA)n Simple_repeat Simple_repeat 2 26 0 489 212 30 45 chr10 135342679 135342779 -4973986 + MER58C DNA MER1_type 116 215 0 225 235 0 20 chr10 135342780 135342831 -4973934 + L2 LINE L2 3255 3304 -9 393 281 0 0 chr10 135343034 135343123 -4973642 + MER34 LTR ERV1 1 89 -453 897 228 81 45 chr10 135343163 135343572 -4973193 + LTR29 LTR ERV1 182 633 -11 6436 157 33 28 chr10 135343612 135343790 -4972975 - Tigger3b DNA MER2_type -1799 1229 1053 5315 84 16 0 chr10 135343790 135344470 -4972295 - LTR8 LTR ERV1 0 691 1 6436 157 33 28 chr10 135344470 135344575 -4972190 - Tigger3b DNA MER2_type -1975 1053 950 1917 152 0 3 chr10 135344575 135344872 -4971893 - AluSq SINE Alu 0 313 18 6436 157 33 28 chr10 135344872 135344903 -4971862 - Tigger3b DNA MER2_type -2078 950 921 2390 104 16 47 chr10 135344903 135345289 -4971476 + THE1C LTR MaLR 1 374 -1 6436 157 33 28 chr10 135345289 135345869 -4970896 - Tigger3b DNA MER2_type -2107 921 323 1661 147 42 58 chr10 135345869 135346182 -4970583 - AluSx SINE Alu -4 308 1 6436 157 33 28 chr10 135346182 135346507 -4970258 - Tigger3b DNA MER2_type -2705 323 1 2353 128 11 22 chr10 135346702 135347070 -4969695 + THE1B LTR MaLR 1 364 0 251 343 71 6 chr10 135347496 135347665 -4969100 - L2 LINE L2 -289 2983 2804 321 320 50 11 chr10 135347816 135347997 -4968768 + MIR SINE MIR 50 237 -25 26 0 0 0 chr10 135347999 135348025 -4968740 + AT_rich Low_complexity Low_complexity 1 26 0 701 269 42 5 chr10 135348079 135348291 -4968474 - MIR SINE MIR -29 233 14 3599 145 3 0 chr10 135349591 135350156 -4966609 - L1PA13 LINE L1 -1953 4193 3627 * 6276 138 7 5 chr10 135350145 135352122 -4964643 + L1PA13 LINE L1 4185 6162 -1 1822 144 46 3 chr10 135352143 135352427 -4964338 - AluJb SINE Alu -16 296 1 1527 143 57 4 chr10 135352746 135352990 -4963775 + AluJb SINE Alu 1 257 -55 1150 137 0 75 chr10 135352990 135353202 -4963563 + AluSg/x SINE Alu 116 311 -1 1802 284 66 69 chr10 135353273 135353603 -4963162 - L1MEc LINE L1 -3883 2513 2184 363 23 0 0 chr10 135353603 135353647 -4963118 + (TG)n Simple_repeat Simple_repeat 1 44 0 1802 284 66 69 chr10 135353647 135355050 -4961715 - L1MEc LINE L1 -4212 2184 785 228 290 20 20 chr10 135355782 135355882 -4960883 - L1MEc LINE L1 -5921 284 185 1197 204 133 35 chr10 135355911 135356250 -4960515 + MLT1A2 LTR MaLR 3 374 0 259 257 142 9 chr10 135357765 135357878 -4958887 + L2 LINE L2 3137 3264 -8 2374 84 0 7 chr10 135358366 135358693 -4958072 - AluY SINE Alu 0 311 1 1775 87 4 9 chr10 135358696 135358927 -4957838 - AluSq SINE Alu -18 295 66 1898 138 3 52 chr10 135360084 135360389 -4956376 - AluSx SINE Alu -22 290 1 1718 181 0 7 chr10 135360472 135360760 -4956005 + AluJo SINE Alu 1 286 -26 624 251 40 111 chr10 135360884 135361189 -4955576 + MLT1J LTR MaLR 105 379 -132 3416 153 122 51 chr10 135361189 135361960 -4954805 + LTR1B LTR ERV1 1 826 0 624 251 40 111 chr10 135361960 135362032 -4954733 + MLT1J LTR MaLR 379 455 -56 2532 81 0 0 chr10 135362113 135362422 -4954343 + AluY SINE Alu 1 309 -2 213 244 0 0 chr10 135362896 135362941 -4953824 + (CATA)n Simple_repeat Simple_repeat 2 46 0 432 166 10 83 chr10 135364655 135364848 -4951917 + CT-rich Low_complexity Low_complexity 1 179 0 363 195 5 87 chr10 135364869 135365064 -4951701 + CT-rich Low_complexity Low_complexity 1 179 0 283 203 16 80 chr10 135365086 135365273 -4951492 + CT-rich Low_complexity Low_complexity 4 178 0 404 241 35 43 chr10 135366777 135366893 -4949872 + MIR SINE MIR 20 134 -128 42 20 0 0 chr10 135367018 135367067 -4949698 + AT_rich Low_complexity Low_complexity 1 49 0 4635 172 22 20 chr10 135367190 135367334 -4949431 + L1MB7 LINE L1 5107 5249 -935 3209 79 37 9 chr10 135367334 135367766 -4948999 + MLT2A1 LTR ERVL 1 444 0 4635 172 22 20 chr10 135367766 135368696 -4948069 + L1MB7 LINE L1 5249 6184 0 295 349 58 11 chr10 135369263 135369452 -4947313 - MIR SINE MIR -19 243 46 2642 46 0 0 chr10 135371546 135371851 -4944914 + AluY SINE Alu 1 305 -6 389 335 25 92 chr10 135372759 135373159 -4943606 + L2 LINE L2 2850 3222 -50 197 330 48 0 chr10 135374013 135374116 -4942649 + MIR3 SINE MIR 96 203 -5 281 292 151 64 chr10 135374221 135374440 -4942325 + L2 LINE L2 3076 3313 0 2337 125 52 56 chr10 135375838 135376426 -4940339 + MER4A LTR ERV1 1 465 0 1972 194 15 18 chr10 135376467 135376863 -4939902 + MSTD LTR MaLR 2 396 0 8942 43 0 0 chr10 135377016 135378871 -4937894 + L1PA5 LINE L1 4299 6153 -1 22 0 0 0 chr10 135378871 135378893 -4937872 + AT_rich Low_complexity Low_complexity 1 22 0 219 154 0 26 chr10 135380827 135380866 -4935899 + GA-rich Low_complexity Low_complexity 4 41 0 2336 88 7 3 chr10 135381217 135381513 -4935252 + AluSq SINE Alu 1 297 -16 382 220 4 39 chr10 135382305 135382558 -4934207 + (CACCAT)n Simple_repeat Simple_repeat 1 244 0 368 259 46 0 chr10 135383022 135383130 -4933635 + MIR SINE MIR 86 198 -64 1640 173 3 46 chr10 135383482 135383806 -4932959 + AluJo SINE Alu 1 310 -2 799 291 73 55 chr10 135384819 135385217 -4931548 + MLT1J LTR MaLR 92 496 -15 230 286 104 104 chr10 135385364 135385402 -4931363 + L2 LINE L2 2989 3026 -246 1909 165 71 6 chr10 135385402 135385754 -4931011 + THE1C LTR MaLR 1 375 0 230 286 104 104 chr10 135385754 135385984 -4930781 + L2 LINE L2 3025 3257 -15 610 249 62 27 chr10 135387253 135387478 -4929287 - L2 LINE L2 0 3313 3081 679 244 0 6 chr10 135387738 135387898 -4928867 - Zaphod DNA AcHobo -30 4001 3843 357 225 123 65 chr10 135387902 135388040 -4928725 + LTR48B LTR ERV1 17 162 -482 680 174 80 62 chr10 135388100 135388498 -4928267 + LTR48 LTR ERV1 282 787 0 * 3689 210 83 29 chr10 135388498 135389645 -4927120 - Zaphod DNA AcHobo -223 3808 2600 3535 156 34 48 chr10 135389656 135390360 -4926405 + LTR8A LTR ERV1 34 727 0 275 160 40 0 chr10 135390370 135390420 -4926345 - Zaphod DNA AcHobo -1439 2592 2541 1139 275 26 9 chr10 135390445 135390790 -4925975 - Zaphod DNA AcHobo -3517 514 164 718 218 145 91 chr10 135390797 135391315 -4925450 - MER34C LTR ERV1 0 585 40 423 261 42 8 chr10 135391319 135391438 -4925327 - Zaphod DNA AcHobo -3906 125 3 504 205 37 70 chr10 135391635 135391729 -4925036 + MER4E LTR ERV1 1 97 -775 1854 139 28 7 chr10 135391729 135392017 -4924748 - AluJb SINE Alu -18 294 1 1877 116 137 21 chr10 135392017 135392353 -4924412 - THE1C LTR MaLR 0 375 1 504 205 37 70 chr10 135392353 135392439 -4924326 + MER4E LTR ERV1 95 284 -588 * 558 192 0 0 chr10 135392437 135392536 -4924229 + MER4D LTR ERV1 547 645 -258 1742 145 24 44 chr10 135392536 135392833 -4923932 + AluJo SINE Alu 1 291 -21 24 32 0 0 chr10 135392834 135392865 -4923900 + AT_rich Low_complexity Low_complexity 1 31 0 1271 208 35 15 chr10 135392865 135393125 -4923640 + MER4D LTR ERV1 629 893 -10 954 213 5 29 chr10 135394353 135394560 -4922205 - MER3 DNA MER1_type -7 202 1 273 268 116 32 chr10 135395476 135395650 -4921115 - MIR SINE MIR -61 147 2 345 82 0 0 chr10 135395707 135395756 -4921009 + (TTCTC)n Simple_repeat Simple_repeat 2 50 0 2033 127 40 0 chr10 135395756 135396094 -4920671 - AluSq SINE Alu 0 350 1 212 254 15 30 chr10 135396254 135396321 -4920444 - L2 LINE L2 -193 3079 3014 * 257 250 0 16 chr10 135396308 135396372 -4920393 + MIR SINE MIR 88 150 -112 2761 129 29 16 chr10 135396618 135397061 -4919704 - MER65C LTR ERV1 -12 449 1 243 184 61 0 chr10 135397490 135397539 -4919226 + MLT1F1 LTR MaLR 5 56 -511 644 268 14 0 chr10 135397551 135397693 -4919072 - MLT1C LTR MaLR -290 177 34 225 94 0 0 chr10 135397694 135397726 -4919039 + (T)n Simple_repeat Simple_repeat 1 32 0 3543 134 46 0 chr10 135397842 135398407 -4918358 - LTR43 LTR ERV1 0 602 12 1529 106 0 0 chr10 135398729 135398947 -4917818 - L1MA1 LINE L1 -7 6295 6078 238 393 26 0 chr10 135398951 135399068 -4917697 - L2 LINE L2 -10 3262 3143 1804 180 57 8 chr10 135399206 135399572 -4917193 + MLT1B LTR MaLR 2 385 -5 2131 142 46 17 chr10 135399855 135400285 -4916480 + MER51B LTR ERV1 1 377 0 642 155 243 0 chr10 135401511 135401659 -4915106 - MER53 DNA DNA -4 185 2 243 167 21 0 chr10 135402879 135402927 -4913838 - MER20 DNA MER1_type -37 182 134 988 231 14 9 chr10 135403278 135403494 -4913271 + MER20 DNA MER1_type 1 217 -2 315 0 0 0 chr10 135403686 135403721 -4913044 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr10 135404499 135404528 -4912237 + AT_rich Low_complexity Low_complexity 1 29 0 4366 120 0 0 chr10 135405319 135405992 -4910773 - L1P LINE L1 -1168 4978 4306 6506 93 2 10 chr10 135405992 135407094 -4909671 + L1PA10 LINE L1 5051 6147 -21 207 0 0 0 chr10 135407094 135407117 -4909648 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 6506 93 2 10 chr10 135407117 135407139 -4909626 + L1PA10 LINE L1 6147 6168 0 1448 166 36 59 chr10 135407179 135407486 -4909279 - AluJb SINE Alu -12 300 1 742 241 70 11 chr10 135409106 135409293 -4907472 + MIR SINE MIR 39 236 -26 221 299 24 104 chr10 135409333 135409511 -4907254 - MIR3 SINE MIR -69 139 3 2107 134 62 14 chr10 135410226 135410584 -4906181 + THE1C LTR MaLR 1 375 0 231 36 0 0 chr10 135411981 135412009 -4904756 + (CA)n Simple_repeat Simple_repeat 2 29 0 360 318 172 28 chr10 135413348 135414069 -4902696 + L2 LINE L2 2223 3053 -219 182 170 85 85 chr10 135414701 135414748 -4902017 + L2 LINE L2 3220 3266 -6 23 68 0 0 chr10 135414817 135414861 -4901904 + AT_rich Low_complexity Low_complexity 1 44 0 775 151 0 16 chr10 135415229 135415426 -4901339 + AluSg/x SINE Alu 188 382 0 325 114 14 29 chr10 135415356 135415598 -4901167 + (GAAA)n Simple_repeat Simple_repeat 4 244 0 * 204 158 0 0 chr10 135415610 135415648 -4901117 + GA-rich Low_complexity Low_complexity 4 41 0 693 154 13 7 chr10 135415768 135415917 -4900848 + GA-rich Low_complexity Low_complexity 4 153 0 2667 38 0 6 chr10 135416407 135416720 -4900045 + AluY SINE Alu 1 311 0 183 229 0 0 chr10 135416901 135416936 -4899829 - L2 LINE L2 -96 3217 3183 225 366 54 9 chr10 135419489 135419601 -4897164 + L3 LINE CR1 242 358 -1219 1209 143 19 5 chr10 135420642 135420851 -4895914 + MER2 DNA MER2_type 1 212 -133 1468 187 47 7 chr10 135420916 135421216 -4895549 + AluJb SINE Alu 1 312 0 319 241 78 72 chr10 135421855 135422021 -4894744 - MER20B DNA MER1_type -17 766 600 789 300 9 5 chr10 135422130 135422350 -4894415 - MER58A DNA MER1_type -3 221 1 253 167 0 56 chr10 135422351 135422405 -4894360 - MIR3 SINE MIR -49 159 109 298 264 104 32 chr10 135422777 135422902 -4893863 - MER5C DNA MER1_type -169 155 22 1280 243 34 55 chr10 135423813 135424290 -4892475 - MLT1C LTR MaLR 0 467 1 1939 142 0 3 chr10 135424418 135424700 -4892065 + AluJo SINE Alu 1 281 -31 366 295 29 36 chr10 135425479 135425618 -4891147 + MIR SINE MIR 77 214 -48 2190 140 3 0 chr10 135425756 135426063 -4890702 - AluSx SINE Alu -4 308 1 1710 165 0 0 chr10 135426156 135426405 -4890360 + AluJb SINE Alu 17 265 -47 1499 124 36 0 chr10 135426420 135426669 -4890096 + L1MA8 LINE L1 6029 6286 -5 3116 196 44 47 chr10 135426701 135426763 -4890002 - L1MB8 LINE L1 -6 6172 6111 387 94 156 0 chr10 135426763 135426810 -4889955 - MADE1 DNA Mariner -2 78 17 2180 132 0 16 chr10 135426810 135427120 -4889645 + AluSx SINE Alu 1 305 -7 387 94 156 0 chr10 135427120 135427136 -4889629 - MADE1 DNA Mariner -63 17 5 3116 196 44 47 chr10 135427136 135427867 -4888898 - L1MB8 LINE L1 -67 6111 5381 1452 221 23 14 chr10 135428592 135428940 -4887825 + MLT1A1 LTR MaLR 1 351 -14 205 146 122 0 chr10 135429024 135429065 -4887700 - MIR3 SINE MIR -49 159 114 208 133 0 0 chr10 135429034 135429064 -4887701 - MIR SINE MIR -117 145 116 209 282 100 18 chr10 135430604 135430714 -4886051 - MIR3 SINE MIR -17 191 73 1663 178 13 73 chr10 135430809 135431287 -4885478 + LTR10B LTR ERV1 1 547 0 2277 179 110 57 chr10 135431552 135432132 -4884633 + LTR36 LTR ERV1 1 611 0 255 226 16 32 chr10 135432335 135432397 -4884368 + MER21B LTR ERV1 1 61 -802 236 111 0 0 chr10 135432389 135432425 -4884340 + MLT1A1 LTR MaLR 278 313 -52 * 2685 246 45 23 chr10 135432472 135433248 -4883517 + MER21B LTR ERV1 19 811 -52 396 277 233 19 chr10 135433657 135433928 -4882837 - MARNA DNA Mariner -99 487 159 228 294 68 41 chr10 135433940 135434086 -4882679 + L2 LINE L2 2958 3107 -165 2046 134 3 16 chr10 135434985 135435298 -4881467 + AluSx SINE Alu 2 310 -2 798 240 7 0 chr10 135435327 135435481 -4881284 + AluJb SINE Alu 137 291 -21 851 246 29 16 chr10 135436064 135436308 -4880457 + Charlie1a DNA MER1_type 1 247 -1208 5339 236 55 21 chr10 135436317 135438542 -4878223 - L1PBa LINE L1 -3569 3293 1811 486 0 0 0 chr10 135438542 135438596 -4878169 + (TC)n Simple_repeat Simple_repeat 1 54 0 5339 236 55 21 chr10 135438596 135440466 -4876299 - L1PBa LINE L1 -5051 1811 7 281 362 22 0 chr10 135440786 135440924 -4875841 + MIR SINE MIR 48 188 -74 222 308 106 0 chr10 135442056 135442160 -4874605 + MIR SINE MIR 16 130 -78 337 257 164 29 chr10 135442330 135442470 -4874295 - MIR SINE MIR -81 181 23 1360 205 67 7 chr10 135446704 135446987 -4869778 - AluJb SINE Alu -12 300 1 330 235 160 25 chr10 135447032 135447151 -4869614 + MIR SINE MIR 15 149 -113 872 187 12 66 chr10 135447152 135447393 -4869372 + L1MB8 LINE L1 5951 6178 0 193 351 80 26 chr10 135448036 135448187 -4868578 + MIR3 SINE MIR 35 193 -15 613 293 56 56 chr10 135449142 135449569 -4867196 + MLT1K LTR MaLR 86 512 -76 409 168 143 75 chr10 135450022 135450183 -4866582 - MER63A DNA MER1_type -37 173 2 363 220 0 0 chr10 135450846 135450937 -4865828 + (TG)n Simple_repeat Simple_repeat 1 91 0 203 291 0 18 chr10 135450952 135451007 -4865758 + L2 LINE L2 3209 3262 -10 496 335 12 6 chr10 135452878 135453051 -4863714 - L3 LINE CR1 -162 1415 1242 1551 144 3 70 chr10 135453159 135453356 -4863409 - AluJb SINE Alu 0 312 142 2214 85 3 0 chr10 135453356 135453649 -4863116 - AluSp SINE Alu -19 294 1 1551 144 3 70 chr10 135453649 135453764 -4863001 - AluJb SINE Alu -170 142 21 2056 102 0 3 chr10 135454565 135454880 -4861885 - AluSx SINE Alu 0 314 1 253 259 25 37 chr10 135456502 135456583 -4860182 - MIR SINE MIR -76 186 107 334 333 44 60 chr10 135456851 135456941 -4859824 - MIR SINE MIR -1 261 171 501 223 18 0 chr10 135456941 135457053 -4859712 + MER81 DNA DNA 1 114 0 334 333 44 60 chr10 135457053 135457214 -4859551 - MIR SINE MIR -91 171 14 2681 96 3 8 chr10 135457693 135458059 -4858706 + THE1B LTR MaLR 1 364 0 785 220 84 44 chr10 135458063 135458313 -4858452 - L1ME3A LINE L1 -9 6161 5902 212 200 25 0 chr10 135458325 135458365 -4858400 - L2 LINE L2 -17 3296 3256 342 0 0 0 chr10 135458420 135458458 -4858307 + (TG)n Simple_repeat Simple_repeat 2 39 0 220 303 145 0 chr10 135459101 135459177 -4857588 + MIR SINE MIR 103 189 -73 325 248 57 29 chr10 135461918 135462023 -4854742 - MER5B DNA MER1_type -2 176 69 1178 171 19 0 chr10 135462172 135462383 -4854382 + AluJb SINE Alu 85 299 -13 1939 107 0 0 chr10 135462387 135462648 -4854117 + AluSx SINE Alu 2 262 -50 185 0 40 0 chr10 135462671 135462696 -4854069 + (CAA)n Simple_repeat Simple_repeat 2 27 0 253 299 140 9 chr10 135463131 135463238 -4853527 + L2 LINE L2 3143 3263 -9 258 319 69 27 chr10 135464519 135464707 -4852058 - L1ME3A LINE L1 -357 5764 5569 373 50 0 175 chr10 135465163 135465243 -4851522 + MADE1 DNA Mariner 1 66 -14 427 316 64 5 chr10 135465247 135465434 -4851331 + L2 LINE L2 3112 3309 -4 616 262 79 46 chr10 135465458 135465752 -4851013 - L1MC/D LINE L1 -370 5751 5462 21 0 0 0 chr10 135465930 135465951 -4850814 + AT_rich Low_complexity Low_complexity 1 21 0 2240 169 34 31 chr10 135466008 135466422 -4850343 - MSTC LTR MaLR 0 428 14 477 313 129 38 chr10 135466550 135467046 -4849719 - L1MC/D LINE L1 -324 5797 5255 2229 216 13 49 chr10 135467179 135468076 -4848689 - L1ME LINE L1 -489 5677 4812 865 305 61 31 chr10 135468088 135468564 -4848201 - L1MEc LINE L1 -5866 530 41 725 259 94 41 chr10 135468592 135469059 -4847706 - HAL1b LINE L1 -853 495 4 338 231 58 0 chr10 135470329 135470450 -4846315 + MER113 DNA MER1_type? 1 128 -393 216 0 0 0 chr10 135470710 135470734 -4846031 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 271 212 45 0 chr10 135471708 135471774 -4844991 + L1ME2 LINE L1 5665 5733 -2075 1460 201 3 26 chr10 135471775 135472088 -4844677 + AluJb SINE Alu 7 312 0 771 270 73 52 chr10 135472125 135472595 -4844170 + L1M4c LINE L1 930 1523 -4859 1473 195 33 16 chr10 135472595 135472898 -4843867 + AluJo SINE Alu 4 311 -1 771 270 73 52 chr10 135472898 135472987 -4843778 + L1M4c LINE L1 1523 1609 -4773 842 252 40 34 chr10 135472989 135473287 -4843478 + L1ME2 LINE L1 5825 6124 -40 2416 112 42 22 chr10 135473653 135474010 -4842755 - THE1B LTR MaLR 0 364 1 207 0 0 0 chr10 135474158 135474181 -4842584 + (T)n Simple_repeat Simple_repeat 1 23 0 23 54 0 0 chr10 135477197 135477234 -4839531 + GC_rich Low_complexity Low_complexity 1 37 0 30 0 0 0 chr10 135477422 135477452 -4839313 + GC_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 135477778 135477806 -4838959 + GC_rich Low_complexity Low_complexity 1 28 0 240 332 83 21 chr10 135479437 135479630 -4837135 + L2 LINE L2 2234 2438 -876 238 310 28 35 chr10 135480257 135480399 -4836366 + L2 LINE L2 2950 3090 -182 313 263 237 25 chr10 135480525 135480723 -4836042 + MIR SINE MIR 19 258 -4 1563 184 14 7 chr10 135480781 135481075 -4835690 + AluJb SINE Alu 1 296 -16 185 314 57 0 chr10 135481521 135481591 -4835174 + MIR3 SINE MIR 110 183 -25 2517 145 34 7 chr10 135483918 135484331 -4832434 + MSTB LTR MaLR 3 426 0 398 276 0 0 chr10 135485850 135485937 -4830828 + Tigger5 DNA MER2_type 2237 2323 0 193 283 28 85 chr10 135485937 135486043 -4830722 - L2 LINE L2 -36 3236 3137 2447 89 15 63 chr10 135486128 135486522 -4830243 + THE1C LTR MaLR 1 375 0 252 288 0 12 chr10 135486761 135486841 -4829924 - Charlie4 DNA MER1_type 0 1961 1883 1644 140 62 0 chr10 135487379 135487651 -4829114 + AluJo SINE Alu 1 289 -23 1968 131 3 0 chr10 135487727 135488017 -4828748 + AluSx SINE Alu 1 291 -21 2254 85 0 3 chr10 135488256 135488563 -4828202 + AluY SINE Alu 1 306 -5 259 327 142 6 chr10 135490675 135490837 -4825928 - MLT1K LTR MaLR -1 587 404 310 210 72 87 chr10 135491159 135491297 -4825468 - MIR SINE MIR -22 240 105 327 296 40 20 chr10 135491628 135491780 -4824985 - MER5B DNA MER1_type -17 161 7 203 260 120 50 chr10 135492198 135492298 -4824467 - L2 LINE L2 0 3272 3166 2024 93 0 0 chr10 135493378 135493646 -4823119 - AluSg SINE Alu -7 303 36 1919 140 0 16 chr10 135494200 135494508 -4822257 - AluSg SINE Alu -7 303 1 1007 239 100 8 chr10 135495063 135495323 -4821442 - MLT1F LTR MaLR -177 365 82 2258 112 0 0 chr10 135496784 135497089 -4819676 - AluSg SINE Alu -5 305 1 299 336 35 9 chr10 135497446 135497573 -4819192 - MIR SINE MIR -63 145 17 21 36 0 0 chr10 135499306 135499334 -4817431 + AT_rich Low_complexity Low_complexity 1 28 0 321 275 38 12 chr10 135499616 135499696 -4817069 + Charlie4 DNA MER1_type 4 85 -1876 2095 133 0 16 chr10 135499755 135500072 -4816693 + AluSx SINE Alu 1 312 0 2753 206 53 62 chr10 135500103 135500760 -4816005 - L1ME1 LINE L1 -17 6149 5499 2257 97 0 6 chr10 135500760 135501071 -4815694 - AluSc SINE Alu 0 309 1 2753 206 53 62 chr10 135501071 135501237 -4815528 - L1ME1 LINE L1 -667 5499 5333 321 246 157 0 chr10 135501237 135501371 -4815394 + Charlie4 DNA MER1_type 1807 1961 0 252 277 42 50 chr10 135502708 135502827 -4813938 - MLT1E3 LTR MaLR -91 535 418 1164 241 78 41 chr10 135502979 135503390 -4813375 - MLT1E3 LTR MaLR -197 427 2 202 311 205 0 chr10 135503922 135504044 -4812721 + MIR SINE MIR 7 153 -109 288 0 0 0 chr10 135504163 135504195 -4812570 + (CA)n Simple_repeat Simple_repeat 1 32 0 267 302 0 12 chr10 135507539 135507625 -4809140 - MIR3 SINE MIR -8 200 116 2258 125 0 0 chr10 135507715 135508018 -4808747 + AluSx SINE Alu 1 303 -9 183 156 0 0 chr10 135508032 135508064 -4808701 + (TG)n Simple_repeat Simple_repeat 2 33 0 527 219 0 0 chr10 135508593 135508689 -4808076 + FLAM_A SINE Alu 1 96 -46 275 330 12 17 chr10 135509932 135510105 -4806660 + (CAGGG)n Simple_repeat Simple_repeat 3 174 0 * 278 130 118 71 chr10 135510040 135510209 -4806556 + (CAGG)n Simple_repeat Simple_repeat 4 180 0 716 207 0 0 chr10 135510825 135510946 -4805819 - FLAM_A SINE Alu -12 121 1 202 304 206 0 chr10 135510999 135511101 -4805664 + L2 LINE L2 3136 3258 -14 530 292 111 27 chr10 135511514 135511812 -4804953 - MER102b DNA MER1_type -15 326 4 2377 180 16 0 chr10 135512610 135513044 -4803721 + L1MB3 LINE L1 5743 6183 0 1197 108 13 0 chr10 135514477 135514718 -4802047 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 682 301 122 29 chr10 135514718 135515160 -4801605 - L2 LINE L2 -464 2850 2368 211 326 123 51 chr10 135515202 135515340 -4801425 + L2 LINE L2 3125 3272 0 320 382 52 28 chr10 135516520 135516732 -4800033 + L1MC4a LINE L1 5675 5891 -1917 1705 164 46 0 chr10 135516895 135517176 -4799589 + AluJb SINE Alu 5 298 -14 275 143 14 86 chr10 135518057 135518127 -4798638 + MLT2B3 LTR ERVL 444 508 -46 665 152 32 8 chr10 135518408 135518533 -4798232 - L1MC1 LINE L1 -2 6331 6204 2370 153 15 0 chr10 135518534 135518933 -4797832 - L1MC1 LINE L1 -174 6159 5755 2058 206 40 80 chr10 135518935 135519512 -4797253 + MLT2B3 LTR ERVL 1 554 0 12063 165 38 9 chr10 135519512 135520989 -4795776 + ERVL LTR ERVL 1 1716 -4048 2095 93 69 3 chr10 135520989 135521280 -4795485 + AluY SINE Alu 1 310 -1 12063 165 38 9 chr10 135521280 135522371 -4794394 + ERVL LTR ERVL 1716 2774 -2990 17841 138 32 15 chr10 135522999 135525448 -4791317 + ERVL LTR ERVL 2770 5174 -590 465 90 0 0 chr10 135525448 135525515 -4791250 + (CATA)n Simple_repeat Simple_repeat 2 68 0 17841 138 32 15 chr10 135525515 135526369 -4790396 + ERVL LTR ERVL 5174 5764 0 1388 141 69 41 chr10 135525843 135525858 -4790907 + Ricksha DNA DNA 185 198 -1848 * 1741 152 193 11 chr10 135525858 135526220 -4790545 - MSTA LTR MaLR 0 428 1 1388 141 69 41 chr10 135526220 135526494 -4790271 + Ricksha DNA DNA 198 482 -1564 933 153 23 23 chr10 135526479 135526655 -4790110 + Ricksha DNA DNA 728 903 -1143 * 2668 176 15 10 chr10 135526655 135527592 -4789173 - L1MC1 LINE L1 -584 5749 4807 363 273 55 8 chr10 135527599 135527727 -4789038 - L1MC1 LINE L1 -1898 4248 4115 4488 237 28 18 chr10 135527767 135529059 -4787706 - L1M4 LINE L1 -1387 4759 3455 2417 95 3 0 chr10 135529066 135529370 -4787395 - AluSp SINE Alu -8 305 1 249 119 0 0 chr10 135529477 135529519 -4787246 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 513 299 63 5 chr10 135529847 135530054 -4786711 + MIR SINE MIR 10 228 -34 2275 68 20 7 chr10 135530915 135531207 -4785558 + AluY SINE Alu 1 296 -15 283 167 0 103 chr10 135531703 135531781 -4784984 + AluJo SINE Alu 84 153 -149 362 299 58 82 chr10 135531997 135532412 -4784353 - L1ME3 LINE L1 0 6162 5758 741 187 147 0 chr10 135532414 135532564 -4784201 - FRAM SINE Alu -12 164 1 2092 94 24 3 chr10 135532581 135532869 -4783896 + AluSc SINE Alu 1 294 -15 291 290 78 56 chr10 135533503 135533734 -4783031 + L2 LINE L2 3078 3313 0 524 238 104 40 chr10 135534493 135534695 -4782070 + MER20 DNA MER1_type 5 219 0 684 104 88 32 chr10 135535086 135535211 -4781554 + AluJb SINE Alu 181 312 0 228 67 0 0 chr10 135536671 135536701 -4780064 + (CA)n Simple_repeat Simple_repeat 2 31 0 180 328 45 30 chr10 135537135 135537202 -4779563 - MIR SINE MIR -59 149 82 557 280 65 27 chr10 135537872 135538133 -4778632 + MER102b DNA MER1_type 68 338 -3 469 132 13 13 chr10 135540282 135540358 -4776407 + MER5A DNA MER1_type 1 76 -113 2011 158 3 0 chr10 135542927 135543224 -4773541 + AluSx SINE Alu 1 298 -14 194 279 206 0 chr10 135544061 135544129 -4772636 + L2 LINE L2 3222 3303 -10 371 332 15 8 chr10 135545830 135546027 -4770738 + MIR SINE MIR 1 260 -2 190 186 23 0 chr10 135546217 135546260 -4770505 - MIR SINE MIR -83 125 82 285 227 30 15 chr10 135547818 135547884 -4768881 - MIR SINE MIR -110 152 86 295 280 91 86 chr10 135548042 135548228 -4768537 + L2 LINE L2 3079 3265 -7 225 238 48 0 chr10 135548388 135548451 -4768314 + MIR SINE MIR 112 177 -85 24 32 0 0 chr10 135548918 135548949 -4767816 + AT_rich Low_complexity Low_complexity 1 31 0 378 275 88 28 chr10 135549381 135549563 -4767202 + MIR SINE MIR 42 234 -28 187 77 26 26 chr10 135551751 135551790 -4764975 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 1875 151 3 22 chr10 135551800 135552111 -4764654 + AluJo SINE Alu 3 307 -5 221 229 74 107 chr10 135552201 135552280 -4764485 + MIR SINE MIR 64 139 -123 2308 115 0 10 chr10 135552280 135552594 -4764171 + AluSx SINE Alu 1 311 -1 221 229 74 107 chr10 135552594 135552636 -4764129 + MIR SINE MIR 139 181 -81 909 145 0 0 chr10 135553061 135553185 -4763580 + AluJb SINE Alu 126 249 -63 947 250 60 11 chr10 135553832 135554180 -4762585 - L1M4 LINE L1 -1767 4379 4015 23 86 0 0 chr10 135554261 135554319 -4762446 + AT_rich Low_complexity Low_complexity 1 58 0 2342 157 11 26 chr10 135554588 135555046 -4761719 + L1MB7 LINE L1 5734 6184 0 2242 104 3 13 chr10 135555077 135555376 -4761389 + AluSx SINE Alu 1 296 -16 375 23 0 0 chr10 135556028 135556072 -4760693 + (TG)n Simple_repeat Simple_repeat 1 44 0 2439 97 3 0 chr10 135557612 135557922 -4758843 - AluSp SINE Alu -2 311 1 1998 112 55 35 chr10 135558104 135558452 -4758313 + THE1A LTR MaLR 1 355 0 2344 116 0 3 chr10 135558842 135559152 -4757613 + AluSx SINE Alu 1 309 -3 2256 114 0 0 chr10 135559350 135559648 -4757117 + AluSx SINE Alu 1 298 -14 2133 142 3 0 chr10 135561835 135562146 -4754619 - AluSx SINE Alu 0 312 1 219 292 83 0 chr10 135564634 135564706 -4752059 - MIR SINE MIR -153 109 32 2071 119 6 38 chr10 135565814 135566134 -4750631 - AluJb SINE Alu -2 310 1 199 191 21 21 chr10 135567519 135567566 -4749199 - MER5A DNA MER1_type -136 53 7 2177 108 3 3 chr10 135568534 135568830 -4747935 - AluSq SINE Alu -17 296 1 360 239 76 7 chr10 135570216 135570368 -4746397 + L1 LINE L1 4798 4976 -1170 207 208 28 111 chr10 135570375 135570447 -4746318 + MER91 DNA MER1_type 75 140 0 783 269 79 61 chr10 135570454 135571155 -4745610 + L1ME3A LINE L1 4978 5701 -469 1513 103 18 0 chr10 135571155 135571378 -4745387 + L1PA8 LINE L1 5943 6169 -3 783 269 79 61 chr10 135571378 135571634 -4745131 + L1ME3A LINE L1 5701 5951 -219 3938 141 13 60 chr10 135571696 135571977 -4744788 + L1MB7 LINE L1 5451 5744 -440 2257 99 0 3 chr10 135571977 135572270 -4744495 - AluSx SINE Alu -15 297 6 3938 141 13 60 chr10 135572270 135572753 -4744012 + L1MB7 LINE L1 5744 6179 -5 1231 219 17 20 chr10 135573853 135574145 -4742620 + AluSx SINE Alu 3 293 -9 190 227 61 45 chr10 135574265 135574331 -4742434 - L2 LINE L2 -1137 2177 2111 187 324 59 49 chr10 135575037 135575139 -4741626 - L2 LINE L2 -2 3270 3168 200 212 15 0 chr10 135575715 135575781 -4740984 + CT-rich Low_complexity Low_complexity 2 68 0 536 302 81 26 chr10 135579128 135579436 -4737329 - L2 LINE L2 -568 2746 2422 211 326 123 51 chr10 135579530 135579668 -4737097 + L2 LINE L2 3125 3272 0 2497 66 10 3 chr10 135584807 135585111 -4731654 + AluY SINE Alu 1 306 -5 333 155 0 0 chr10 135585921 135585979 -4730786 + (CA)n Simple_repeat Simple_repeat 1 58 0 216 0 0 0 chr10 135586344 135586368 -4730397 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 471 323 40 14 chr10 135586640 135586863 -4729902 - MIR SINE MIR -33 229 1 775 196 0 0 chr10 135587189 135587322 -4729443 - FLAM_C SINE Alu 0 133 1 2668 26 7 3 chr10 135587324 135587629 -4729136 - AluY SINE Alu -5 306 1 2384 104 0 3 chr10 135588222 135588531 -4728234 - AluSp SINE Alu 0 313 6 2098 125 0 35 chr10 135588578 135588889 -4727876 - AluSq SINE Alu -13 300 1 445 308 38 14 chr10 135589710 135589921 -4726844 - MER20 DNA MER1_type 0 219 4 221 340 117 0 chr10 135589995 135590098 -4726667 - L2 LINE L2 -22 3250 3136 2101 144 0 13 chr10 135590183 135590489 -4726276 - AluSx SINE Alu -10 302 1 447 219 26 26 chr10 135590489 135590603 -4726162 - FLAM_A SINE Alu -13 129 16 347 202 88 35 chr10 135591301 135591484 -4725281 + L1MA10 LINE L1 6215 6403 0 1029 64 0 8 chr10 135591693 135591818 -4724947 + AluY SINE Alu 1 124 -187 2199 122 0 28 chr10 135591827 135592147 -4724618 + AluSx SINE Alu 1 311 -1 222 320 74 51 chr10 135592364 135592412 -4724353 + L2 LINE L2 2713 2758 -556 2260 132 0 0 chr10 135592412 135592723 -4724042 - AluSx SINE Alu -1 311 1 222 320 74 51 chr10 135592723 135592930 -4723835 + L2 LINE L2 2758 2974 -340 1285 259 77 96 chr10 135593258 135593696 -4723069 + L1MC5 LINE L1 6054 6499 -1462 1410 176 129 32 chr10 135593696 135594076 -4722689 - LTR52 LTR ERVL 0 421 5 1285 259 77 96 chr10 135594076 135594601 -4722164 + L1MC5 LINE L1 6499 7010 -951 2382 151 46 5 chr10 135594601 135595012 -4721753 + MSTA LTR MaLR 1 428 0 1285 259 77 96 chr10 135595012 135595492 -4721273 + L1MC5 LINE L1 7010 7498 -463 2239 119 0 0 chr10 135595508 135595793 -4720972 - AluSx SINE Alu -27 285 1 384 343 70 16 chr10 135595821 135596063 -4720702 + L1ME2 LINE L1 66 320 -6076 312 268 9 27 chr10 135596225 135596268 -4720497 + L1ME2 LINE L1 1571 1613 -4783 2155 131 28 31 chr10 135596268 135596628 -4720137 + THE1B LTR MaLR 2 360 -4 312 268 9 27 chr10 135596628 135596696 -4720069 + L1ME2 LINE L1 1613 1680 -4716 2251 248 40 28 chr10 135596702 135597449 -4719316 + L1ME2 LINE L1 5478 6233 0 571 194 48 145 chr10 135597443 135597466 -4719299 + L1MC5 LINE L1 7508 7532 -429 * 2929 10 0 0 chr10 135597466 135597779 -4718986 + AluYb8 SINE Alu 1 313 -5 571 194 48 145 chr10 135597779 135598147 -4718618 + L1MC5 LINE L1 7532 7861 -100 2473 70 3 0 chr10 135598162 135598460 -4718305 - AluSx SINE Alu -13 299 1 2345 98 0 0 chr10 135600058 135600353 -4716412 - AluSg SINE Alu -15 295 1 1017 42 21 7 chr10 135600723 135600866 -4715899 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 255 93 0 0 chr10 135601023 135601066 -4715699 + (CTAA)n Simple_repeat Simple_repeat 2 44 0 401 259 108 54 chr10 135601777 135601962 -4714803 + L1MEc LINE L1 2648 2842 -3373 * 425 270 144 63 chr10 135601954 135602015 -4714750 + L1ME3A LINE L1 5728 5783 -387 1796 188 7 7 chr10 135602015 135602324 -4714441 - AluJo SINE Alu -2 310 2 425 270 144 63 chr10 135602324 135602484 -4714281 + L1ME3A LINE L1 5783 5967 -203 1467 103 0 0 chr10 135602508 135602693 -4714072 + AluSq SINE Alu 1 185 -128 3901 91 59 54 chr10 135602693 135603300 -4713465 - LTR66 LTR ERVL 0 610 1 735 112 0 0 chr10 135603300 135603398 -4713367 + AluSg/x SINE Alu 177 274 -36 33 0 0 0 chr10 135603398 135603431 -4713334 + AT_rich Low_complexity Low_complexity 1 33 0 2423 83 3 10 chr10 135603431 135603743 -4713022 + AluY SINE Alu 1 310 -1 1760 153 36 0 chr10 135604423 135604704 -4712061 + AluSg SINE Alu 1 291 -19 2335 76 0 0 chr10 135606450 135606751 -4710014 - AluSc SINE Alu -8 301 1 189 198 48 0 chr10 135607418 135607544 -4709221 + (TA)n Simple_repeat Simple_repeat 1 132 0 378 184 61 12 chr10 135607580 135607743 -4709022 + (TA)n Simple_repeat Simple_repeat 2 172 0 516 279 37 12 chr10 135608213 135608374 -4708391 - MIR SINE MIR -70 192 28 566 257 63 54 chr10 135608533 135608582 -4708183 + MER58A DNA MER1_type 1 48 -2372 1990 116 3 16 chr10 135608582 135608918 -4707847 - AluSx SINE Alu 0 312 1 566 257 63 54 chr10 135608918 135609090 -4707675 + MER58A DNA MER1_type 48 224 0 1922 122 10 23 chr10 135609245 135609549 -4707216 + AluSx SINE Alu 1 300 -12 1865 116 3 66 chr10 135609746 135610064 -4706701 - AluJo SINE Alu -12 300 3 754 233 88 37 chr10 135610198 135610451 -4706314 - MIR SINE MIR -1 261 1 225 269 202 10 chr10 135613114 135613218 -4703547 - L2 LINE L2 -3 3310 3187 201 321 83 0 chr10 135613361 135613445 -4703320 - L2 LINE L2 -1001 2313 2223 23 0 0 0 chr10 135615744 135615767 -4700998 + AT_rich Low_complexity Low_complexity 1 23 0 397 58 19 0 chr10 135626401 135626453 -4690312 - Alu SINE Alu -255 53 1 2079 129 3 0 chr10 135631961 135632271 -4684494 + AluSq SINE Alu 1 311 -2 543 240 158 35 chr10 135633003 135633257 -4683508 - MER5C DNA MER1_type -3 321 37 2338 90 0 0 chr10 135633452 135633753 -4683012 + AluSg SINE Alu 1 301 -9 200 387 36 18 chr10 135633852 135633963 -4682802 + MER5A DNA MER1_type 34 146 -43 2205 107 0 3 chr10 135635545 135635875 -4680890 + AluSx SINE Alu 1 312 0 572 204 60 36 chr10 135635975 135636256 -4680509 + L1MDa LINE L1 2536 2829 -3711 336 293 73 19 chr10 135636295 135636609 -4680156 + L1M4 LINE L1 2237 2567 -3579 362 85 62 39 chr10 135636667 135636797 -4679968 + (TA)n Simple_repeat Simple_repeat 2 134 0 309 240 199 7 chr10 135636803 135636949 -4679816 + L1MCa LINE L1 1918 2091 -4335 273 205 123 88 chr10 135637052 135637289 -4679476 + L1ME3A LINE L1 5724 5950 -212 255 252 107 82 chr10 135637331 135637443 -4679322 + L1ME3A LINE L1 5952 6073 -97 1830 185 42 11 chr10 135637443 135637821 -4678944 - MLT1B LTR MaLR 0 390 1 255 252 107 82 chr10 135637821 135637914 -4678851 + L1ME3A LINE L1 6073 6162 -8 340 225 125 0 chr10 135638930 135639050 -4677715 + MIR SINE MIR 112 246 -16 534 247 137 5 chr10 135639658 135639848 -4676917 - MER20 DNA MER1_type -4 215 1 314 309 170 53 chr10 135639914 135640290 -4676475 - L2 LINE L2 -22 3250 2831 189 0 0 0 chr10 135641066 135641087 -4675678 + (CCCG)n Simple_repeat Simple_repeat 4 24 0 1845 127 33 0 chr10 135641478 135641778 -4674987 + AluJb SINE Alu 1 310 -2 252 313 89 27 chr10 135641897 135642121 -4674644 - L1MC4a LINE L1 -1888 5920 5683 1443 233 131 18 chr10 135642341 135642783 -4673982 + Charlie1b DNA MER1_type 24 515 -8 2097 118 7 0 chr10 135643102 135643524 -4673241 + AluSg SINE Alu 1 424 0 1255 127 0 29 chr10 135643581 135643786 -4672979 - AluSg/x SINE Alu -12 300 102 1053 131 0 0 chr10 135643786 135643939 -4672826 - AluSg/x SINE Alu -18 292 140 282 116 0 0 chr10 135643945 135643964 -4672801 + (TG)n Simple_repeat Simple_repeat 1 62 0 282 116 0 0 chr10 135643964 135644007 -4672758 + (TG)n Simple_repeat Simple_repeat 2 44 0 502 58 0 130 chr10 135644028 135644235 -4672530 + (TA)n Simple_repeat Simple_repeat 1 180 0 1422 251 78 97 chr10 135644715 135645153 -4671612 + L1MC5 LINE L1 6054 6499 -1462 1372 176 129 32 chr10 135645153 135645533 -4671232 - LTR52 LTR ERVL 0 421 5 1422 251 78 97 chr10 135645533 135646058 -4670707 + L1MC5 LINE L1 6499 7010 -951 2347 151 46 5 chr10 135646058 135646469 -4670296 + MSTA LTR MaLR 1 428 0 1422 251 78 97 chr10 135646469 135646949 -4669816 + L1MC5 LINE L1 7010 7498 -463 2095 119 0 0 chr10 135646965 135647250 -4669515 - AluSx SINE Alu -27 285 1 2160 133 25 28 chr10 135647725 135648085 -4668680 + THE1B LTR MaLR 2 360 -4 262 247 55 0 chr10 135648086 135648159 -4668606 + L1ME2 LINE L1 1614 1690 -4706 2403 246 40 28 chr10 135648159 135648906 -4667859 + L1ME2 LINE L1 5478 6233 0 701 198 45 145 chr10 135648900 135648923 -4667842 + L1MC5 LINE L1 7508 7532 -429 * 2785 10 0 0 chr10 135648923 135649236 -4667529 + AluYb8 SINE Alu 1 313 -5 701 198 45 145 chr10 135649236 135649619 -4667146 + L1MC5 LINE L1 7532 7867 -94 1971 99 24 0 chr10 135649619 135649911 -4666854 - AluSx SINE Alu -13 299 1 701 198 45 145 chr10 135649911 135649952 -4666813 + L1MC5 LINE L1 7867 7911 -50 332 192 0 106 chr10 135650261 135650365 -4666400 + Charlie8 DNA MER1_type 99 191 -2226 250 268 6 39 chr10 135650501 135650680 -4666085 + C-rich Low_complexity Low_complexity 3 175 0 399 131 0 0 chr10 135651455 135651516 -4665249 + L1PA13 LINE L1 6084 6144 -19 2877 277 125 60 chr10 135651651 135652443 -4664322 - HAL1 LINE L1 0 2507 1768 2009 111 0 4 chr10 135652443 135652722 -4664043 + AluSq SINE Alu 1 278 -35 243 0 0 0 chr10 135652728 135652755 -4664010 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2877 277 125 60 chr10 135652755 135653984 -4662781 - HAL1 LINE L1 -743 1764 346 464 300 97 53 chr10 135654111 135654288 -4662477 - HAL1 LINE L1 -2186 321 128 1699 163 0 33 chr10 135654288 135654595 -4662170 - AluJb SINE Alu -15 297 1 464 300 97 53 chr10 135654595 135654664 -4662101 - HAL1 LINE L1 -2379 128 64 5570 169 36 18 chr10 135655856 135656002 -4660763 - L1MC2 LINE L1 -10 6334 6192 181 0 0 0 chr10 135656002 135656022 -4660743 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2326 73 7 0 chr10 135656022 135656308 -4660457 - AluSp SINE Alu -1 307 1 5570 169 36 18 chr10 135656308 135657352 -4659413 - L1MC2 LINE L1 -151 6193 5122 388 220 121 23 chr10 135659420 135659552 -4657213 + MIR SINE MIR 118 262 0 1640 182 64 27 chr10 135659967 135660341 -4656424 - MLT1B LTR MaLR -2 388 1 2334 117 0 0 chr10 135663320 135663628 -4653137 - AluSx SINE Alu -4 308 1 245 216 0 0 chr10 135664124 135664175 -4652590 + MIR SINE MIR 98 148 -114 427 314 65 0 chr10 135664485 135664654 -4652111 + MIR SINE MIR 31 210 -52 725 227 44 36 chr10 135665507 135665758 -4651007 + L1MC5 LINE L1 7252 7504 -457 183 167 0 0 chr10 135665767 135665809 -4650956 + GA-rich Low_complexity Low_complexity 2 43 0 448 246 77 93 chr10 135665816 135666129 -4650636 + L1MC5 LINE L1 7494 7801 -160 33 25 0 0 chr10 135667618 135667658 -4649107 + AT_rich Low_complexity Low_complexity 1 40 0 3826 100 50 9 chr10 135667658 135668216 -4648549 - L1PA10 LINE L1 0 6168 5588 725 212 60 0 chr10 135669193 135669344 -4647421 - FRAM SINE Alu -16 160 1 857 179 73 62 chr10 135671086 135671271 -4645494 - MER58B DNA MER1_type -2087 333 143 2238 82 0 0 chr10 135671271 135671540 -4645225 - AluSx SINE Alu -21 291 23 857 179 73 62 chr10 135671540 135671685 -4645080 - MER58B DNA MER1_type -2277 143 1 546 281 20 7 chr10 135671974 135672120 -4644645 - L2 LINE L2 -1 3312 3165 2087 146 3 3 chr10 135672148 135672457 -4644308 - AluSq SINE Alu -4 309 1 207 100 0 0 chr10 135672570 135672600 -4644165 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 324 272 79 26 chr10 135672767 135672881 -4643884 + LTR16C LTR ERVL 142 261 -230 388 157 22 79 chr10 135672984 135673073 -4643692 - MLT1D LTR MaLR 0 505 422 1014 184 88 57 chr10 135673769 135674020 -4642745 + MSTB1 LTR MaLR 1 249 -147 930 185 36 81 chr10 135674023 135674245 -4642520 - AluJo SINE Alu -100 212 1 909 254 46 11 chr10 135674369 135674736 -4642029 + MLT1D LTR MaLR 1 414 -91 1804 188 3 0 chr10 135674738 135675047 -4641718 - AluJb SINE Alu -2 310 1 4607 61 41 3 chr10 135675363 135675949 -4640816 - LTR14B LTR ERVK 0 608 1 23 0 0 0 chr10 135676199 135676222 -4640543 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 135676360 135676385 -4640380 + AT_rich Low_complexity Low_complexity 1 25 0 248 232 88 40 chr10 135676404 135676529 -4640236 - L1ME4a LINE L1 -9 6112 5982 670 274 137 26 chr10 135676662 135677049 -4639716 - L1ME4a LINE L1 -2027 5781 5352 288 238 16 0 chr10 135677651 135677714 -4639051 - L2 LINE L2 0 3313 3250 383 278 64 43 chr10 135677726 135677913 -4638852 + MIR SINE MIR 72 262 0 219 114 0 0 chr10 135680309 135680344 -4636421 + (T)n Simple_repeat Simple_repeat 1 35 0 1987 141 0 33 chr10 135680805 135681111 -4635654 - AluSx SINE Alu -16 296 1 3205 252 65 29 chr10 135681344 135683267 -4633498 - L1ME1 LINE L1 -23 6143 4164 632 144 10 10 chr10 135683270 135683374 -4633391 - MLT1A2 LTR MaLR -4 370 267 2708 211 26 32 chr10 135683374 135684127 -4632638 - L1ME1 LINE L1 -2373 3773 3024 1888 133 51 51 chr10 135684127 135684502 -4632263 + THE1C LTR MaLR 1 375 0 2708 211 26 32 chr10 135684502 135684548 -4632217 - L1ME1 LINE L1 -3122 3024 2979 2021 145 125 2 chr10 135685253 135685661 -4631104 - L1MB4 LINE L1 0 6180 5723 276 272 160 10 chr10 135686758 135686964 -4629801 + L1ME4a LINE L1 5804 6040 -81 387 0 0 0 chr10 135687236 135687279 -4629486 + (TTTTA)n Simple_repeat Simple_repeat 5 47 0 1586 181 0 24 chr10 135687281 135687568 -4629197 - AluJo SINE Alu -32 280 1 312 339 27 57 chr10 135688432 135688730 -4628035 - L2 LINE L2 -13 3300 3012 200 369 0 0 chr10 135689492 135689557 -4627208 - MIR SINE MIR -184 78 14 264 324 89 48 chr10 135689563 135689934 -4626831 - L2 LINE L2 -469 2845 2460 3850 121 48 93 chr10 135690139 135690242 -4626523 - Tigger3(Golem) DNA MER2_type -1 3027 2921 2293 106 3 0 chr10 135690242 135690543 -4626222 - AluSx SINE Alu -10 302 1 1095 110 0 0 chr10 135690545 135690700 -4626065 - L1PA11 LINE L1 -9 6165 6011 3850 121 48 93 chr10 135690700 135691123 -4625642 - Tigger3(Golem) DNA MER2_type -108 2920 2542 2249 112 0 16 chr10 135691123 135691428 -4625337 + AluSx SINE Alu 1 300 -12 3850 121 48 93 chr10 135691428 135691674 -4625091 - Tigger3(Golem) DNA MER2_type -486 2542 2286 725 269 25 0 chr10 135691663 135691823 -4624942 - Tigger3(Golem) DNA MER2_type -2864 165 2 * 303 217 22 43 chr10 135691832 135691920 -4624845 + (TA)n Simple_repeat Simple_repeat 1 86 -49 1817 166 34 43 chr10 135691920 135691999 -4624766 + MER7A DNA MER2_type 2 80 -2958 2160 114 0 0 chr10 135691999 135692312 -4624453 - AluSx SINE Alu 0 313 1 1817 166 34 43 chr10 135692312 135692580 -4624185 + MER7A DNA MER2_type 80 345 -1 303 217 22 43 chr10 135692580 135692629 -4624136 + (TA)n Simple_repeat Simple_repeat 86 135 0 2151 99 38 3 chr10 135693359 135693651 -4623114 - AluSx SINE Alu -8 304 3 255 301 16 24 chr10 135693918 135694041 -4622724 + L2 LINE L2 2950 3071 -201 308 357 62 5 chr10 135694405 135694615 -4622150 + MIR SINE MIR 7 228 -34 2494 41 7 0 chr10 135694885 135695180 -4621585 - AluY SINE Alu -14 297 1 2809 105 38 25 chr10 135695804 135695964 -4620801 - L1PA16 LINE L1 -2 6164 6008 2088 111 0 4 chr10 135695964 135696243 -4620522 - AluSx SINE Alu -2 310 33 2809 105 38 25 chr10 135696243 135696528 -4620237 - L1PA16 LINE L1 -158 6008 5713 693 231 37 2 chr10 135696530 135696817 -4619948 + MER58B DNA MER1_type 1 341 0 262 256 0 11 chr10 135697187 135697277 -4619488 + MIR SINE MIR 163 251 -11 1957 146 21 0 chr10 135697300 135697613 -4619152 + AluSx SINE Alu 3 321 0 546 198 43 0 chr10 135697798 135697914 -4618851 + MER20 DNA MER1_type 95 215 -4 1443 231 82 70 chr10 135698305 135698705 -4618060 - L1MC4 LINE L1 -1 8041 7632 2313 115 0 0 chr10 135698705 135699001 -4617764 - AluSg SINE Alu -12 298 3 1443 231 82 70 chr10 135699001 135699099 -4617666 - L1MC4 LINE L1 -410 7632 7537 625 180 0 0 chr10 135699109 135699209 -4617556 - AluSg/x SINE Alu -39 271 172 226 281 0 0 chr10 135699241 135699330 -4617435 - L1MC4 LINE L1 -1340 6702 6614 502 81 12 12 chr10 135699343 135699429 -4617336 + (TA)n Simple_repeat Simple_repeat 1 86 0 275 229 13 6 chr10 135699429 135699508 -4617257 - AluSp SINE Alu -134 169 111 4665 221 67 20 chr10 135699516 135700143 -4616622 - L1MC4a LINE L1 -540 7268 6672 423 68 0 0 chr10 135700143 135700202 -4616563 + (TG)n Simple_repeat Simple_repeat 2 60 0 4665 221 67 20 chr10 135700202 135700835 -4615930 - L1MC4a LINE L1 -1136 6672 5949 2136 130 146 8 chr10 135701566 135701942 -4614823 + MSTA LTR MaLR 1 428 0 9619 140 10 39 chr10 135701944 135702851 -4613914 + MSTA-int LTR MaLR 3 842 -738 2239 144 8 37 chr10 135702851 135703226 -4613539 - THE1B LTR MaLR 0 364 1 9619 140 10 39 chr10 135703226 135703944 -4612821 + MSTA-int LTR MaLR 842 1580 0 2205 124 107 45 chr10 135703944 135704347 -4612418 + MSTA LTR MaLR 1 428 0 237 214 0 29 chr10 135704506 135704576 -4612189 + A-rich Low_complexity Low_complexity 4 71 0 523 326 64 17 chr10 135704758 135705230 -4611535 - L1ME4a LINE L1 -243 5878 5385 22 0 0 0 chr10 135705289 135705311 -4611454 + AT_rich Low_complexity Low_complexity 1 22 0 2236 114 7 0 chr10 135705311 135705609 -4611156 - AluSc SINE Alu -9 300 1 1641 182 3 17 chr10 135705620 135705911 -4610854 - AluJo SINE Alu -25 287 1 2008 156 0 0 chr10 135706277 135706572 -4610193 + AluJb SINE Alu 1 295 -17 237 156 313 0 chr10 135708011 135708075 -4608690 - L2 LINE L2 -4 3309 3226 771 231 23 0 chr10 135708082 135708255 -4608510 + L1PB4 LINE L1 5972 6148 -8 425 263 52 96 chr10 135708504 135708686 -4608079 - L1ME4a LINE L1 -12 6109 5939 297 0 0 0 chr10 135708686 135708719 -4608046 + (CA)n Simple_repeat Simple_repeat 1 33 0 425 263 52 96 chr10 135708719 135708787 -4607978 - L1ME4a LINE L1 -182 5939 5870 213 184 0 0 chr10 135709012 135709050 -4607715 - MIR SINE MIR -2 260 223 3064 178 158 95 chr10 135709066 135709469 -4607296 + L1MC3 LINE L1 6673 7049 -736 231 303 0 0 chr10 135709469 135709545 -4607220 + MLT1F1 LTR MaLR 35 110 -457 3064 178 158 95 chr10 135709545 135710093 -4606672 + L1MC3 LINE L1 7049 7769 -16 2318 49 21 0 chr10 135710093 135710380 -4606385 - AluY SINE Alu -18 293 1 3064 178 158 95 chr10 135710380 135710399 -4606366 + L1MC3 LINE L1 7769 7785 0 198 316 133 6 chr10 135710399 135710557 -4606208 - MIR SINE MIR -52 210 33 206 39 0 77 chr10 135710995 135711047 -4605718 + (CGGGA)n Simple_repeat Simple_repeat 2 49 0 21 57 0 0 chr10 135711409 135711444 -4605321 + GC_rich Low_complexity Low_complexity 1 35 0 1646 185 75 64 chr10 135713071 135713526 -4603239 + MLT1C LTR MaLR 1 460 -7 252 326 70 39 chr10 135716754 135716883 -4599882 + MIR3 SINE MIR 6 138 -70 4481 152 34 30 chr10 135719061 135719889 -4596876 + Tigger3b DNA MER2_type 1 831 -400 431 176 0 10 chr10 135720050 135720152 -4596613 + (CTCA)n Simple_repeat Simple_repeat 4 104 0 1964 176 0 56 chr10 135720161 135720187 -4596578 + Tigger3b DNA MER2_type 854 880 -2149 1215 94 0 0 chr10 135720187 135720367 -4596398 + (CTCA)n Simple_repeat Simple_repeat 1 180 0 1964 176 0 56 chr10 135720367 135720400 -4596365 + Tigger3b DNA MER2_type 880 913 -2116 2169 110 3 3 chr10 135720400 135720709 -4596056 - AluSx SINE Alu -3 309 1 1964 176 0 56 chr10 135720709 135721040 -4595725 + Tigger3b DNA MER2_type 913 1223 -9 793 199 102 5 chr10 135721235 135721421 -4595344 - MER58A DNA MER1_type -15 209 6 247 229 0 0 chr10 135721574 135721622 -4595143 - L1ME LINE L1 -551 5570 5523 421 149 0 0 chr10 135723807 135723874 -4592891 + L1M4 LINE L1 5402 5468 -706 229 65 0 43 chr10 135724305 135724351 -4592414 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 38530 87 8 7 chr10 135724351 135730469 -4586296 - L1PA6 LINE L1 -22 6132 8 3222 214 72 26 chr10 135730586 135731980 -4584785 - L1ME LINE L1 -706 5468 3929 191 286 125 27 chr10 135732316 135732428 -4584337 + L2 LINE L2 3167 3289 -24 543 229 159 5 chr10 135732518 135732719 -4584046 - L1M4 LINE L1 -1757 4389 4158 1615 142 0 19 chr10 135732726 135732994 -4583771 - AluJb SINE Alu -49 263 1 253 259 149 19 chr10 135733164 135733289 -4583476 - MIR SINE MIR -55 153 39 393 256 86 46 chr10 135734272 135734620 -4582145 - MLT1H LTR MaLR 0 549 186 782 258 16 51 chr10 135736595 135736851 -4579914 - MIR SINE MIR -3 259 13 501 183 0 0 chr10 135737477 135737570 -4579195 - L1MC1 LINE L1 0 6333 6241 325 287 88 7 chr10 135738405 135738541 -4578224 - MIR3 SINE MIR -61 147 1 227 269 21 0 chr10 135738955 135739048 -4577717 - L1ME4a LINE L1 -6 6115 6021 471 320 77 13 chr10 135739497 135739731 -4577034 + MIR SINE MIR 9 257 -5 21 0 0 0 chr10 135740140 135740161 -4576604 + AT_rich Low_complexity Low_complexity 1 21 0 507 17 0 0 chr10 135740498 135740558 -4576207 + (TC)n Simple_repeat Simple_repeat 1 60 0 5001 53 0 0 chr10 135744398 135745000 -4571765 + L1PA5 LINE L1 5550 6151 -3 275 296 194 51 chr10 135745067 135745681 -4571084 + L2 LINE L2 1599 2124 -1190 1630 185 10 75 chr10 135745681 135746081 -4570684 - MLT1A2 LTR MaLR 0 374 1 275 296 194 51 chr10 135746081 135746395 -4570370 + L2 LINE L2 2124 2660 -654 265 339 28 9 chr10 135747208 135747317 -4569448 + MIR3 SINE MIR 94 204 -4 341 305 32 32 chr10 135747681 135747835 -4568930 + MER5A DNA MER1_type 13 166 -23 * 510 315 18 0 chr10 135747704 135747869 -4568896 - MER5A DNA MER1_type -21 168 1 23 33 0 0 chr10 135748063 135748093 -4568672 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 135748114 135748142 -4568623 + AT_rich Low_complexity Low_complexity 1 28 0 371 285 143 8 chr10 135749132 135749325 -4567440 + MIR SINE MIR 25 241 -21 298 208 104 56 chr10 135751071 135751215 -4565550 - L1ME4a LINE L1 -3 6118 5968 438 332 22 35 chr10 135751324 135751553 -4565212 - L1ME4a LINE L1 -318 5803 5578 462 36 0 0 chr10 135751639 135751695 -4565070 + (CCAA)n Simple_repeat Simple_repeat 1 56 0 313 276 47 87 chr10 135751727 135751854 -4564911 + L2 LINE L2 3187 3308 -5 211 261 174 26 chr10 135752286 135752401 -4564364 + L2 LINE L2 2904 3035 -237 191 133 22 67 chr10 135752575 135752620 -4564145 - MER5B DNA MER1_type -132 46 4 275 307 143 35 chr10 135754237 135754524 -4562241 - MARNA DNA Mariner -255 331 14 350 275 90 14 chr10 135757325 135757736 -4559029 + MLT1L LTR MaLR 43 539 -76 2078 98 0 50 chr10 135758867 135759189 -4557576 + AluSx SINE Alu 1 307 0 1224 192 8 27 chr10 135759190 135759451 -4557314 - L1MD3 LINE L1 -10 7985 7730 277 281 59 33 chr10 135761906 135762051 -4554714 - MIR SINE MIR -29 179 29 1850 176 0 19 chr10 135763438 135763756 -4553009 + AluJb SINE Alu 1 312 0 233 228 279 7 chr10 135763948 135764084 -4552681 - MIR SINE MIR -42 220 33 228 67 0 0 chr10 135767011 135767041 -4549724 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 210 223 191 43 chr10 135767420 135767514 -4549251 + MIR SINE MIR 16 123 -85 2634 65 0 0 chr10 135768010 135768319 -4548446 - AluY SINE Alu -2 309 1 251 222 0 0 chr10 135768423 135768468 -4548297 - MIR SINE MIR -55 153 109 318 161 0 46 chr10 135768644 135768731 -4548034 + CT-rich Low_complexity Low_complexity 2 84 0 192 152 0 0 chr10 135768981 135769014 -4547751 + GA-rich Low_complexity Low_complexity 1 33 0 238 268 12 0 chr10 135770003 135770085 -4546680 - MER112 DNA MER1_type -91 169 87 277 244 13 26 chr10 135770247 135770325 -4546440 + MIR SINE MIR 48 124 -138 2536 54 0 3 chr10 135770685 135770980 -4545785 - AluY SINE Alu -17 294 1 212 203 135 54 chr10 135771482 135771556 -4545209 + MIR SINE MIR 61 140 -68 192 323 15 15 chr10 135772082 135772147 -4544618 + MIR3 SINE MIR 144 208 0 308 260 41 73 chr10 135772183 135772306 -4544459 - L2 LINE L2 -19 3294 3176 2865 186 48 2 chr10 135772944 135773502 -4543263 + L1MB5 LINE L1 5583 6166 -8 215 222 0 0 chr10 135777410 135777446 -4539319 - L2 LINE L2 -16 3297 3262 21 0 0 0 chr10 135777495 135777516 -4539249 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 135777995 135778016 -4538749 + AT_rich Low_complexity Low_complexity 1 21 0 252 267 257 9 chr10 135779092 135779197 -4537568 - L2 LINE L2 -5 3267 3137 918 85 0 0 chr10 135780032 135780173 -4536592 + AluY SINE Alu 167 307 0 222 192 19 19 chr10 135780273 135780325 -4536440 - L2 LINE L2 -1 3312 3261 2656 131 47 7 chr10 135781267 135781694 -4535071 - L1PB4 LINE L1 0 6156 5713 206 310 163 25 chr10 135781751 135781954 -4534811 - L2 LINE L2 -93 3179 2949 440 268 4 0 chr10 135782322 135782571 -4534194 + (CA)n Simple_repeat Simple_repeat 1 250 0 6132 156 59 27 chr10 135782944 135783843 -4532922 - Tigger3b DNA MER2_type -1797 1231 283 2201 93 0 30 chr10 135783843 135784143 -4532622 + AluSx SINE Alu 1 291 -21 6132 156 59 27 chr10 135784143 135784432 -4532333 - Tigger3b DNA MER2_type -2745 283 5 302 286 50 34 chr10 135788052 135788171 -4528594 - MIR SINE MIR -56 152 32 1610 210 27 0 chr10 135789262 135789591 -4527174 - MER58B DNA MER1_type 0 341 4 2174 229 57 25 chr10 135789713 135790364 -4526401 - MLT1E2 LTR MaLR -2 624 4 306 341 78 16 chr10 135790751 135790872 -4525893 - L2 LINE L2 0 3272 3141 1798 212 78 11 chr10 135790872 135791310 -4525455 - MLT1C LTR MaLR 0 467 1 1882 178 49 9 chr10 135792336 135792685 -4524080 - MLT1A1 LTR MaLR -2 363 1 269 352 31 8 chr10 135793242 135793370 -4523395 - MIR SINE MIR -72 190 60 247 231 33 116 chr10 135794022 135794143 -4522622 - MIR SINE MIR -51 211 101 258 303 22 11 chr10 135794201 135794290 -4522475 + (TG)n Simple_repeat Simple_repeat 1 90 0 274 127 7 218 chr10 135794788 135794930 -4521835 - MER3 DNA MER1_type -8 201 90 181 237 0 0 chr10 135795237 135795275 -4521490 - MIR SINE MIR -26 236 199 219 36 0 0 chr10 135796017 135796045 -4520720 + (A)n Simple_repeat Simple_repeat 1 28 0 228 243 57 6 chr10 135796787 135796871 -4519894 + MIR SINE MIR 58 147 -61 285 258 45 58 chr10 135798045 135798200 -4518565 + MIR3 SINE MIR 52 204 -4 192 269 96 58 chr10 135799465 135799569 -4517196 + L2 LINE L2 2992 3099 -173 211 276 17 0 chr10 135799673 135799731 -4517034 - MER5A DNA MER1_type -77 112 54 386 265 61 15 chr10 135800596 135800728 -4516037 + MIR3 SINE MIR 66 203 -5 378 256 58 83 chr10 135801086 135801242 -4515523 + MIR SINE MIR 111 262 0 2283 127 51 25 chr10 135801407 135801762 -4515003 - THE1B LTR MaLR 0 364 1 267 0 0 0 chr10 135801769 135801799 -4514966 - THE1A LTR MaLR -325 30 1 1267 203 33 4 chr10 135802422 135802693 -4514072 - L1MB7 LINE L1 -12 6172 5894 1294 263 81 19 chr10 135803096 135803515 -4513250 + MLT1E LTR MaLR 87 531 -62 656 312 73 42 chr10 135803618 135804114 -4512651 + L2 LINE L2 2768 3266 -6 379 310 76 20 chr10 135804489 135804686 -4512079 + L2 LINE L2 3060 3267 -46 2006 143 48 0 chr10 135804996 135805289 -4511476 - AluSx SINE Alu -5 307 1 694 152 170 36 chr10 135808552 135808717 -4508048 + MER3 DNA MER1_type 1 187 -22 320 291 47 65 chr10 135808723 135808922 -4507843 - L2 LINE L2 -424 2890 2696 2264 104 13 0 chr10 135808922 135809231 -4507534 + AluSq SINE Alu 1 313 0 320 291 47 65 chr10 135809231 135809309 -4507456 - L2 LINE L2 -618 2696 2618 1612 194 17 0 chr10 135810106 135810394 -4506371 - AluSx SINE Alu -19 293 1 23 33 0 0 chr10 135810397 135810427 -4506338 + AT_rich Low_complexity Low_complexity 1 30 0 225 209 142 68 chr10 135810728 135810876 -4505889 + L1ME4a LINE L1 5961 6119 -2 283 301 64 26 chr10 135811688 135811844 -4504921 - MARNA DNA Mariner -88 498 337 207 0 0 0 chr10 135814955 135814978 -4501787 + (TC)n Simple_repeat Simple_repeat 2 24 0 225 220 0 34 chr10 135815333 135815392 -4501373 + (TCTCTG)n Simple_repeat Simple_repeat 6 62 0 315 0 0 0 chr10 135816554 135816589 -4500176 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 135817491 135817515 -4499250 + AT_rich Low_complexity Low_complexity 1 24 0 267 330 62 31 chr10 135818190 135818384 -4498381 + MLT1K LTR MaLR 136 335 -253 403 247 0 10 chr10 135818497 135818594 -4498171 + MLT1K LTR MaLR 484 579 -9 180 77 0 0 chr10 135819052 135819078 -4497687 + (T)n Simple_repeat Simple_repeat 1 26 0 2847 22 0 0 chr10 135819539 135819850 -4496915 - AluYb8 SINE Alu -7 311 1 986 217 155 0 chr10 135820216 135820474 -4496291 - L1MD2 LINE L1 -17 6342 6045 2225 110 3 25 chr10 135820522 135820839 -4495926 - AluSx SINE Alu -2 310 1 205 259 109 109 chr10 135821847 135822094 -4494671 - L2 LINE L2 -212 3060 2814 193 325 239 8 chr10 135822305 135822422 -4494343 + MIR3 SINE MIR 61 204 -4 25 31 0 0 chr10 135824757 135824789 -4491976 + AT_rich Low_complexity Low_complexity 1 32 0 279 253 74 68 chr10 135827898 135828060 -4488705 + L1ME4a LINE L1 1261 1423 -4949 256 311 17 76 chr10 135828566 135828685 -4488080 + L2 LINE L2 3151 3262 -10 251 261 14 14 chr10 135828706 135828775 -4487990 + HAL1b LINE L1 549 617 -731 325 328 86 50 chr10 135829087 135829389 -4487376 + L1ME4a LINE L1 2184 2496 -3888 755 289 79 29 chr10 135830943 135831399 -4485366 + L1ME4a LINE L1 3965 4443 -1939 14839 133 22 24 chr10 135831828 135833732 -4483033 + Tigger1 DNA MER2_type 26 1932 -486 216 0 0 0 chr10 135833732 135833756 -4483009 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1975 121 4 14 chr10 135833757 135834037 -4482728 - AluSc SINE Alu -32 277 1 14839 133 22 24 chr10 135834037 135834527 -4482238 + Tigger1 DNA MER2_type 1931 2418 0 2152 105 3 30 chr10 135834720 135835024 -4481741 + AluSq SINE Alu 5 300 -13 1377 284 116 21 chr10 135835349 135836071 -4480694 + L1ME4a LINE L1 5554 6344 -13 915 162 56 0 chr10 135836624 135836803 -4479962 + MER53 DNA DNA 1 189 0 356 102 0 17 chr10 135841052 135841111 -4475654 + (TTTTC)n Simple_repeat Simple_repeat 5 62 0 2072 148 0 0 chr10 135841125 135841429 -4475336 - AluSx SINE Alu -8 304 1 732 222 6 35 chr10 135842225 135842396 -4474369 + L1MB8 LINE L1 6010 6175 -3 652 260 109 53 chr10 135842516 135842834 -4473931 + MLT1G1 LTR MaLR 25 402 -193 1266 202 28 7 chr10 135842834 135843116 -4473649 - L1M4 LINE L1 -942 5440 5153 4338 224 55 17 chr10 135843217 135844790 -4471975 - L1M4 LINE L1 -2683 3699 2064 3391 147 7 2 chr10 135844906 135845450 -4471315 + L1MA5 LINE L1 5400 5946 -354 1013 184 0 0 chr10 135845615 135845778 -4470987 - AluJb SINE Alu -17 295 133 500 219 55 30 chr10 135845785 135845831 -4470934 - L1M4 LINE L1 -746 5400 5357 2229 118 0 0 chr10 135845831 135846118 -4470647 - AluSg SINE Alu -23 287 1 500 219 55 30 chr10 135846118 135846823 -4469942 - L1M4 LINE L1 -789 5357 4496 1916 232 56 0 chr10 135846824 135847306 -4469459 + L1M4 LINE L1 3972 4480 -1666 1332 223 143 37 chr10 135847303 135847850 -4468915 - L1M4 LINE L1 -981 5234 4630 * 4700 251 81 26 chr10 135847861 135850913 -4465852 - L1MEc LINE L1 -2475 3740 546 814 181 13 32 chr10 135850933 135851088 -4465677 - FRAM SINE Alu -25 151 1 693 309 79 10 chr10 135851090 135851381 -4465384 - L1MEc LINE L1 -6066 330 20 366 329 76 44 chr10 135851383 135851790 -4464975 - L1M4 LINE L1 -1778 4437 4018 2018 132 13 7 chr10 135851909 135852219 -4464546 + AluSq SINE Alu 1 312 -1 564 328 45 15 chr10 135853786 135854084 -4462681 + L2 LINE L2 2770 3082 -231 363 43 0 0 chr10 135854151 135854197 -4462568 - MADE1 DNA Mariner -34 46 1 328 353 22 7 chr10 135854199 135854338 -4462427 + L2 LINE L2 3172 3312 -1 255 173 0 0 chr10 135854382 135854434 -4462331 + (TAA)n Simple_repeat Simple_repeat 1 52 0 214 321 117 12 chr10 135854855 135855017 -4461748 - L2 LINE L2 -952 2362 2184 190 320 10 50 chr10 135855339 135855439 -4461326 + L2 LINE L2 3197 3292 -21 6509 116 25 2 chr10 135855793 135856769 -4459996 - L1PA10 LINE L1 -1364 4782 3785 1510 170 4 0 chr10 135856750 135857009 -4459756 + L1PA10 LINE L1 4789 5048 -1098 * 6666 86 23 19 chr10 135857156 135857579 -4459186 + L1PA10 LINE L1 5056 5476 -692 2439 83 0 10 chr10 135857579 135857893 -4458872 + AluY SINE Alu 1 311 0 6666 86 23 19 chr10 135857893 135858562 -4458203 + L1PA10 LINE L1 5476 6156 -12 307 297 44 0 chr10 135858910 135859001 -4457764 + L1ME4a LINE L1 5964 6058 -63 276 198 135 95 chr10 135859169 135859295 -4457470 + MER103 DNA DNA 20 150 -16 257 278 113 23 chr10 135859630 135859763 -4457002 - LTR16A LTR ERVL -13 437 293 267 306 106 87 chr10 135861862 135862173 -4454592 - L2 LINE L2 0 3272 2956 193 271 60 53 chr10 135862524 135862657 -4454108 - L2 LINE L2 -894 2420 2287 916 229 136 72 chr10 135862663 135863096 -4453669 + MLT1C LTR MaLR 7 467 0 191 276 0 69 chr10 135863106 135863164 -4453601 - L2 LINE L2 -1039 2275 2222 288 182 18 0 chr10 135863407 135863462 -4453303 - MER5A DNA MER1_type -93 96 41 2086 129 0 16 chr10 135867611 135867963 -4448802 - AluY SINE Alu 0 311 1 211 221 132 0 chr10 135869611 135869679 -4447086 - L2 LINE L2 -534 2780 2704 232 213 0 0 chr10 135869679 135869740 -4447025 - MER53 DNA DNA -7 182 122 2386 91 3 0 chr10 135869740 135870075 -4446690 + AluSp SINE Alu 16 351 0 2259 199 19 53 chr10 135870128 135870410 -4446355 - L1MB8 LINE L1 0 6178 5925 2313 133 126 5 chr10 135870410 135870792 -4445973 - MSTA LTR MaLR 0 428 1 2259 199 19 53 chr10 135870792 135871088 -4445677 - L1MB8 LINE L1 -253 5925 5620 394 156 9 110 chr10 135871090 135871163 -4445602 - MER53 DNA DNA -89 100 40 1659 150 0 96 chr10 135871163 135871496 -4445269 - AluY SINE Alu -10 301 1 394 156 9 110 chr10 135871496 135871531 -4445234 - MER53 DNA DNA -149 40 3 369 311 143 33 chr10 135871574 135872002 -4444763 - L2 LINE L2 -662 2652 2178 186 358 0 30 chr10 135872036 135872103 -4444662 - L2 LINE L2 -18 3254 3190 246 161 35 58 chr10 135872633 135872720 -4444045 + T-rich Low_complexity Low_complexity 4 88 0 818 252 27 65 chr10 135872739 135872849 -4443916 + L1ME1 LINE L1 5808 5921 -245 4597 187 79 14 chr10 135872849 135873275 -4443490 - Tigger6a DNA MER2_type -514 1083 686 2228 115 7 0 chr10 135873275 135873579 -4443186 - AluSx SINE Alu -6 306 1 4597 187 79 14 chr10 135873579 135874169 -4442596 - Tigger6a DNA MER2_type -911 686 1 818 252 27 65 chr10 135874169 135874427 -4442338 + L1ME1 LINE L1 5921 6162 -4 2327 86 14 0 chr10 135874501 135874793 -4441972 - AluSx SINE Alu -16 296 1 2035 107 3 21 chr10 135874982 135875272 -4441493 - AluSx SINE Alu -1 311 27 580 211 7 20 chr10 135875280 135875427 -4441338 - L1MB8 LINE L1 -1048 5098 4954 315 0 0 0 chr10 135875428 135875463 -4441302 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1865 132 37 4 chr10 135875465 135875738 -4441027 - AluSx SINE Alu -30 282 1 600 263 26 104 chr10 135875743 135875869 -4440896 - L1MB8 LINE L1 -2849 3297 3163 591 53 0 0 chr10 135875869 135875944 -4440821 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 332 111 0 0 chr10 135875946 135875991 -4440774 - AluS SINE Alu -28 272 228 600 263 26 104 chr10 135875991 135876315 -4440450 - L1MB8 LINE L1 -2984 3162 2839 1655 169 10 33 chr10 135876579 135876886 -4439879 - AluJo SINE Alu -12 300 1 2567 63 0 0 chr10 135876893 135877193 -4439572 - AluY SINE Alu -11 300 1 373 349 69 22 chr10 135877534 135877766 -4438999 + L1ME LINE L1 4991 5233 -913 316 248 51 117 chr10 135877770 135878179 -4438586 + L1ME LINE L1 5255 5640 -530 405 383 9 26 chr10 135879265 135879492 -4437273 + MIR SINE MIR 28 250 -12 337 339 40 16 chr10 135879813 135879937 -4436828 - L2 LINE L2 0 3272 3146 1234 160 60 85 chr10 135879941 135880259 -4436506 - MLT1B LTR MaLR -7 383 74 317 233 83 50 chr10 135880259 135880379 -4436386 - L1MC4 LINE L1 -1339 6983 1941 1939 166 0 3 chr10 135881410 135881705 -4435060 - AluSx SINE Alu -18 294 1 264 348 68 63 chr10 135881951 135882172 -4434593 + MIR SINE MIR 28 249 -13 27 29 0 0 chr10 135883120 135883154 -4433611 + AT_rich Low_complexity Low_complexity 1 34 0 1458 113 52 0 chr10 135883709 135883922 -4432843 + MER30 DNA MER1_type 5 228 -2 182 252 153 90 chr10 135886311 135886375 -4430390 + MIR SINE MIR 23 98 -164 1026 264 63 63 chr10 135886375 135886886 -4429879 + MLT1J LTR MaLR 1 511 0 182 252 153 90 chr10 135886886 135886932 -4429833 + MIR SINE MIR 98 140 -122 216 301 172 11 chr10 135887431 135887524 -4429241 - MIR SINE MIR -81 127 20 289 315 79 8 chr10 135888237 135888364 -4428401 - L2 LINE L2 -158 3114 2979 268 108 20 88 chr10 135893153 135893255 -4423510 + (TCC)n Simple_repeat Simple_repeat 2 96 0 306 341 12 35 chr10 135894037 135894207 -4422558 - MIR SINE MIR -64 198 33 315 0 0 0 chr10 135894811 135894846 -4421919 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 292 323 65 0 chr10 135895306 135895430 -4421335 + MIR SINE MIR 59 190 -72 348 306 118 14 chr10 135897492 135897636 -4419129 - MIR3 SINE MIR -28 180 22 1869 207 46 7 chr10 135898333 135898743 -4418022 + MSTB LTR MaLR 1 426 0 267 322 0 66 chr10 135898759 135898880 -4417885 - MIR SINE MIR -61 147 35 299 209 0 11 chr10 135900056 135900147 -4416618 + (CA)n Simple_repeat Simple_repeat 1 90 0 639 207 3 0 chr10 135900255 135900610 -4416155 + (CA)n Simple_repeat Simple_repeat 1 356 0 186 216 0 0 chr10 135900626 135900700 -4416065 + (CA)n Simple_repeat Simple_repeat 2 75 0 344 332 20 47 chr10 135901313 135901504 -4415261 + MIR SINE MIR 11 197 -65 202 286 0 0 chr10 135902187 135902236 -4414529 + (TG)n Simple_repeat Simple_repeat 1 49 0 239 395 43 19 chr10 135903792 135903954 -4412811 - MIR SINE MIR -96 166 1 33 25 0 0 chr10 135905352 135905392 -4411373 + AT_rich Low_complexity Low_complexity 1 40 0 7116 139 18 11 chr10 135905907 135907104 -4409661 - Tigger1 DNA MER2_type -1213 1205 1 890 317 95 56 chr10 135907390 135907452 -4409313 + L1MC4a LINE L1 4107 4165 -1981 1845 134 69 3 chr10 135907452 135907742 -4409023 + AluSx SINE Alu 1 309 -3 890 317 95 56 chr10 135907742 135908803 -4407962 + L1MC4a LINE L1 4165 5343 -803 356 244 119 21 chr10 135908957 135909190 -4407575 + L1MC4a LINE L1 5615 5745 -376 21 71 0 0 chr10 135911125 135911167 -4405598 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 135911517 135911546 -4405219 + AT_rich Low_complexity Low_complexity 1 29 0 255 243 35 75 chr10 135911717 135911890 -4404875 - HAL1 LINE L1 -111 2396 2231 322 230 51 73 chr10 135911970 135912148 -4404617 - HAL1b LINE L1 -432 916 743 413 351 63 34 chr10 135912199 135912646 -4404119 + L1MEc LINE L1 174 633 -5930 1771 263 73 81 chr10 135913040 135914724 -4402041 + L1MEc LINE L1 782 2482 -3900 9062 111 11 4 chr10 135914724 135915999 -4400766 + HSMAR1 DNA Mariner 1 1284 -3 1771 263 73 81 chr10 135915999 135916297 -4400468 + L1MEc LINE L1 2482 2781 -3601 24 53 0 0 chr10 135919056 135919094 -4397671 + AT_rich Low_complexity Low_complexity 1 38 0 1914 168 0 19 chr10 135919359 135919669 -4397096 + AluJo SINE Alu 1 304 -8 2123 117 0 0 chr10 135920170 135920444 -4396321 + AluSq SINE Alu 1 274 -39 299 189 162 34 chr10 135920449 135920597 -4396168 - MER5C DNA MER1_type -83 241 75 234 274 36 24 chr10 135922006 135922090 -4394675 + L2 LINE L2 3225 3309 -4 240 35 0 0 chr10 135923136 135923165 -4393600 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2677 89 8 29 chr10 135924686 135925067 -4391698 - THE1C LTR MaLR 0 375 3 2021 104 29 4 chr10 135927314 135927593 -4389172 + AluSc SINE Alu 1 286 -23 204 122 41 20 chr10 135927610 135927659 -4389106 + A-rich Low_complexity Low_complexity 2 51 0 522 57 0 0 chr10 135928030 135928100 -4388665 + (GA)n Simple_repeat Simple_repeat 1 70 0 240 35 0 0 chr10 135928787 135928816 -4387949 + (TG)n Simple_repeat Simple_repeat 1 29 0 362 294 34 20 chr10 135928824 135928970 -4387795 + L1ME LINE L1 5510 5657 -464 282 280 32 0 chr10 135929664 135929757 -4387008 + MIR SINE MIR 106 201 -61 1800 170 24 15 chr10 135929795 135930131 -4386634 + MER2 DNA MER2_type 4 342 -2 387 98 0 0 chr10 135930137 135930198 -4386567 + (TG)n Simple_repeat Simple_repeat 2 62 0 270 241 51 51 chr10 135930661 135930798 -4385967 + L2 LINE L2 2820 2956 -316 503 268 16 0 chr10 135932545 135932672 -4384093 - MER45A DNA AcHobo -49 129 1 2625 44 0 16 chr10 135933918 135934234 -4382531 - AluY SINE Alu 0 311 1 3212 179 47 0 chr10 135934262 135934843 -4381922 + L1MB3 LINE L1 5431 6038 -145 244 211 14 0 chr10 135934843 135934914 -4381851 + L1MB3 LINE L1 5967 6038 -145 993 188 19 9 chr10 135934914 135935127 -4381638 + L1MB3 LINE L1 5967 6181 -2 2136 130 13 0 chr10 135936972 135937280 -4379485 - AluSx SINE Alu 0 312 1 2263 219 92 33 chr10 135938894 135939533 -4377232 - L1ME3 LINE L1 -1 6161 5485 331 146 39 97 chr10 135939846 135939885 -4376880 - LTR33 LTR ERVL -2 519 479 2223 140 92 5 chr10 135939885 135940278 -4376487 - MSTA LTR MaLR -1 427 1 331 146 39 97 chr10 135940278 135940341 -4376424 - LTR33 LTR ERVL -42 479 423 449 264 112 30 chr10 135940748 135940945 -4375820 + MLT1K LTR MaLR 376 588 0 2124 88 0 4 chr10 135941196 135941469 -4375296 + AluY SINE Alu 39 310 -1 207 100 0 0 chr10 135942595 135942625 -4374140 + (TAA)n Simple_repeat Simple_repeat 2 31 0 384 282 99 33 chr10 135943266 135943447 -4373318 + L1ME4a LINE L1 5474 5666 -455 252 252 113 0 chr10 135943595 135943710 -4373055 + L1ME4a LINE L1 5793 5920 -201 2066 128 0 30 chr10 135943766 135944064 -4372701 - AluSg SINE Alu -21 289 1 233 184 20 0 chr10 135944072 135944121 -4372644 + L1ME4a LINE L1 6051 6100 -21 315 315 56 9 chr10 135944548 135944656 -4372109 + MER5A DNA MER1_type 12 124 -65 744 254 132 25 chr10 135947322 135947649 -4369116 - MLT1I LTR MaLR -7 402 41 308 280 30 10 chr10 135948391 135948491 -4368274 - MLT1J2 LTR MaLR -298 152 51 768 268 150 32 chr10 135949836 135950302 -4366463 - LTR33 LTR ERVL 0 521 1 180 343 123 0 chr10 135950414 135950560 -4366205 + MIR SINE MIR 19 182 -80 1711 242 105 29 chr10 135950936 135951481 -4365284 - MLT1E LTR MaLR 0 593 8 234 0 0 0 chr10 135951548 135951574 -4365191 + (TG)n Simple_repeat Simple_repeat 2 27 0 2777 10 3 3 chr10 135951584 135951890 -4364875 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 135952746 135952771 -4363994 + AT_rich Low_complexity Low_complexity 1 25 0 473 250 178 11 chr10 135953855 135954119 -4362646 + LTR16A LTR ERVL 23 330 -120 231 272 94 52 chr10 135954925 135955138 -4361627 - L1MCa LINE L1 -4929 1497 1276 5818 158 7 26 chr10 135956179 135957517 -4359248 - L1MA4 LINE L1 -7 6293 4978 26 30 0 0 chr10 135957596 135957629 -4359136 + AT_rich Low_complexity Low_complexity 1 33 0 234 227 0 0 chr10 135957665 135957709 -4359056 - HAL1b LINE L1 -904 444 401 2859 95 0 24 chr10 135958376 135958796 -4357969 - L1PA13 LINE L1 0 6163 5754 185 0 40 0 chr10 135959392 135959417 -4357348 + (TTA)n Simple_repeat Simple_repeat 3 28 0 237 306 116 27 chr10 135959877 135960024 -4356741 + MIR3 SINE MIR 1 160 -48 2042 119 18 37 chr10 135961064 135961508 -4355257 + MER51B LTR ERV1 1 377 0 291 283 61 10 chr10 135961534 135961633 -4355132 + MIR3 SINE MIR 66 169 -39 1292 246 54 9 chr10 135962983 135963316 -4353449 - MER89 LTR ERV1 -14 545 198 378 151 14 0 chr10 135963302 135963375 -4353390 - MER89 LTR ERV1 -482 77 4 * 1332 181 104 80 chr10 135963472 135963924 -4352841 - MLT1C LTR MaLR -1 466 4 7110 121 40 11 chr10 135964745 135965932 -4350833 + Tigger3b DNA MER2_type 1 1221 -10 186 43 0 0 chr10 135965983 135966006 -4350759 + (CA)n Simple_repeat Simple_repeat 1 23 0 1671 180 53 28 chr10 135968777 135969138 -4347627 - THE1C LTR MaLR -5 370 1 23 0 0 0 chr10 135970206 135970229 -4346536 + AT_rich Low_complexity Low_complexity 1 23 0 348 308 39 19 chr10 135971403 135971507 -4345258 + L2 LINE L2 3201 3306 -7 186 133 0 0 chr10 135972130 135972160 -4344605 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 620 293 22 6 chr10 135972168 135972349 -4344416 - MIR SINE MIR -32 230 47 2080 128 0 3 chr10 135972461 135972796 -4343969 + AluSx SINE Alu 1 334 0 21 82 0 0 chr10 135972862 135972911 -4343854 + AT_rich Low_complexity Low_complexity 1 49 0 273 282 92 18 chr10 135974146 135974309 -4342456 + HAL1 LINE L1 1399 1573 -934 1886 159 51 59 chr10 135974319 135974708 -4342057 - MLT1B LTR MaLR -4 386 1 586 295 238 9 chr10 135975024 135975230 -4341535 + L2 LINE L2 2456 2613 -700 2295 114 0 13 chr10 135975230 135975546 -4341219 + AluSp SINE Alu 1 312 -1 586 295 238 9 chr10 135975546 135976039 -4340726 + L2 LINE L2 2613 3312 -1 38 51 0 0 chr10 135976535 135976594 -4340171 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 135977185 135977206 -4339559 + (TAA)n Simple_repeat Simple_repeat 2 22 0 365 289 67 41 chr10 135977710 135977904 -4338861 + L1M4 LINE L1 4154 4352 -1794 24 0 0 0 chr10 135978119 135978143 -4338622 + AT_rich Low_complexity Low_complexity 1 24 0 242 324 42 14 chr10 135980412 135980554 -4336211 + Charlie8 DNA MER1_type 36 181 -2236 4133 29 23 10 chr10 135981286 135981800 -4334965 + L1PA4 LINE L1 5635 6155 0 296 315 87 65 chr10 135981927 135982203 -4334562 - L2 LINE L2 -4 3268 2987 689 287 137 33 chr10 135982534 135983022 -4333743 + L2 LINE L2 1133 1671 -1643 568 287 90 8 chr10 135983727 135983971 -4332794 + MLT1C LTR MaLR 204 467 0 791 223 27 5 chr10 135985906 135986094 -4330671 - MER20 DNA MER1_type 0 219 28 283 314 88 46 chr10 135986684 135986945 -4329820 - L2 LINE L2 -56 3257 2986 509 153 34 23 chr10 135986956 135987132 -4329633 + (TG)n Simple_repeat Simple_repeat 1 178 0 243 206 14 55 chr10 135987147 135987220 -4329545 + (TG)n Simple_repeat Simple_repeat 2 71 0 326 216 33 13 chr10 135987234 135987387 -4329378 + (TG)n Simple_repeat Simple_repeat 1 156 0 782 271 154 63 chr10 135987724 135988407 -4328358 - L1MC4 LINE L1 0 8042 7298 7253 172 5 25 chr10 135988419 135991048 -4325717 + L1P3 LINE L1 2 2636 -3825 484 95 24 0 chr10 135991138 135991222 -4325543 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 289 306 66 27 chr10 135991390 135991648 -4325117 + L1MEc LINE L1 802 1069 -5494 284 260 160 45 chr10 135991675 135991944 -4324821 + L1MEc LINE L1 1143 1442 -5121 302 361 94 41 chr10 135991949 135992193 -4324572 + L1MEc LINE L1 1329 1585 -4799 890 186 34 0 chr10 135992764 135992941 -4323824 - MER3 DNA MER1_type -26 183 1 296 343 64 23 chr10 135993903 135994075 -4322690 - MIR SINE MIR -5 257 79 184 214 0 157 chr10 135994423 135994493 -4322272 - MIR SINE MIR -109 99 41 369 0 0 0 chr10 135994735 135994776 -4321989 + (TG)n Simple_repeat Simple_repeat 1 41 0 346 354 85 15 chr10 135995108 135995368 -4321397 + L2 LINE L2 3036 3313 0 357 335 104 0 chr10 135997177 135997350 -4319415 - MIR SINE MIR -12 250 60 357 290 54 9 chr10 135998605 135998736 -4318029 + MIR SINE MIR 12 149 -67 1056 242 114 29 chr10 135999478 135999821 -4316944 + MLT1D LTR MaLR 70 441 -64 2384 157 43 12 chr10 136000050 136000465 -4316300 - MSTA LTR MaLR 0 428 1 2728 124 44 5 chr10 136001157 136001569 -4315196 - MSTA LTR MaLR 0 428 1 186 352 78 55 chr10 136001666 136001794 -4314971 + MIR SINE MIR 16 146 -62 1780 155 15 103 chr10 136002817 136003224 -4313541 - MLT1A2 LTR MaLR 0 374 4 211 269 19 0 chr10 136003681 136003733 -4313032 - MIR SINE MIR -62 146 94 1270 247 21 29 chr10 136005393 136005774 -4310991 - MLT1C LTR MaLR -18 449 72 182 182 30 0 chr10 136006754 136006787 -4309978 + MIR SINE MIR 113 146 -116 517 292 14 0 chr10 136007644 136007788 -4308977 - L2 LINE L2 0 3313 3168 359 277 136 57 chr10 136009029 136009206 -4307559 + MIR SINE MIR 23 213 -49 2540 81 0 0 chr10 136009879 136010188 -4306577 + AluY SINE Alu 1 309 -2 268 291 0 38 chr10 136010854 136010933 -4305832 + MIR SINE MIR 78 153 -109 633 246 5 85 chr10 136011803 136012014 -4304751 + L2 LINE L2 3119 3312 -1 1636 165 41 76 chr10 136012066 136012459 -4304306 + MLT1B LTR MaLR 10 388 -2 332 250 11 11 chr10 136014158 136014246 -4302519 - MIR SINE MIR -172 90 3 200 326 20 0 chr10 136016133 136016231 -4300534 + (TG)n Simple_repeat Simple_repeat 1 100 0 522 247 0 0 chr10 136017677 136017855 -4298910 + (CA)n Simple_repeat Simple_repeat 1 178 0 723 119 0 0 chr10 136018204 136018313 -4298452 + AluY SINE Alu 199 307 -4 1313 225 102 21 chr10 136018319 136018693 -4298072 - MLT1C LTR MaLR -58 409 6 499 265 144 9 chr10 136019713 136019928 -4296837 + MER112 DNA MER1_type 10 253 -7 927 284 95 27 chr10 136020571 136021160 -4295605 - L1MC5 LINE L1 -32 7929 7301 398 228 41 67 chr10 136021312 136021501 -4295264 - L1MC4a LINE L1 -632 7224 7039 1642 178 0 27 chr10 136021501 136021794 -4294971 + AluJb SINE Alu 1 285 -27 398 228 41 67 chr10 136021794 136021805 -4294960 - L1MC4a LINE L1 -817 7039 7029 1974 193 48 21 chr10 136022652 136023071 -4293694 - MSTB1 LTR MaLR 0 432 3 2374 122 8 19 chr10 136023430 136023798 -4292967 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr10 136024246 136024270 -4292495 + AT_rich Low_complexity Low_complexity 1 24 0 576 265 9 3 chr10 136025713 136025860 -4290905 + MIR SINE MIR 14 159 -49 676 215 47 7 chr10 136026720 136026869 -4289896 - MER20 DNA MER1_type 0 219 65 481 289 141 58 chr10 136027700 136028253 -4288512 + MLT2F LTR ERVL 32 630 -33 2878 87 0 11 chr10 136028461 136028840 -4287925 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 136029113 136029134 -4287631 + AT_rich Low_complexity Low_complexity 1 21 0 560 129 10 0 chr10 136032093 136032194 -4284571 + (TG)n Simple_repeat Simple_repeat 1 102 0 24 67 0 0 chr10 136033372 136033417 -4283348 + AT_rich Low_complexity Low_complexity 1 45 0 7808 22 17 0 chr10 136033475 136034456 -4282309 - L1PA3 LINE L1 -3 6152 5168 1466 253 30 33 chr10 136034760 136035155 -4281610 - MLT1E LTR MaLR 0 593 200 591 203 144 13 chr10 136035249 136035402 -4281363 - MLT1E LTR MaLR -420 173 1 26 0 0 0 chr10 136035772 136035798 -4280967 + AT_rich Low_complexity Low_complexity 1 26 0 243 217 0 0 chr10 136035927 136035973 -4280792 + HAL1b LINE L1 439 484 -864 623 307 209 29 chr10 136036418 136037008 -4279757 + L1ME3 LINE L1 4530 5225 -921 801 151 34 10 chr10 136037247 136037539 -4279226 + (TAGA)n Simple_repeat Simple_repeat 1 299 0 1018 109 35 17 chr10 136037643 136037994 -4278771 + (TAGA)n Simple_repeat Simple_repeat 1 358 0 320 304 143 34 chr10 136038038 136038275 -4278490 + L1ME3 LINE L1 5512 5774 -347 2094 112 3 31 chr10 136039606 136039927 -4276838 - AluSx SINE Alu 0 312 1 23 0 0 0 chr10 136041607 136041630 -4275135 + AT_rich Low_complexity Low_complexity 1 23 0 475 231 56 0 chr10 136042586 136042729 -4274036 - L1MB4 LINE L1 -1 6179 6029 231 61 0 0 chr10 136044501 136044534 -4272231 + (A)n Simple_repeat Simple_repeat 1 33 0 221 265 0 0 chr10 136049116 136049165 -4267600 + L2 LINE L2 3265 3313 0 2630 119 8 5 chr10 136053356 136053750 -4263015 + Tigger1 DNA MER2_type 2024 2418 0 338 330 49 49 chr10 136053751 136053954 -4262811 + L1ME3 LINE L1 5773 5975 -187 518 306 151 0 chr10 136054421 136054699 -4262066 - L1ME4a LINE L1 -244 5877 5558 37 23 0 0 chr10 136055065 136055109 -4261656 + AT_rich Low_complexity Low_complexity 1 44 0 296 326 106 18 chr10 136057639 136057866 -4258899 - MIR SINE MIR -14 248 2 267 310 0 0 chr10 136058657 136058728 -4258037 + (CA)n Simple_repeat Simple_repeat 1 71 0 458 239 0 26 chr10 136061302 136061415 -4255350 - MLT1D LTR MaLR 0 505 396 325 306 90 0 chr10 136062097 136062271 -4254494 + MIR SINE MIR 37 225 -37 1080 252 53 48 chr10 136062639 136063051 -4253714 - MLT1C LTR MaLR -2 465 52 675 199 33 20 chr10 136064668 136064819 -4251946 - L1ME3 LINE L1 -13 6149 5997 564 253 26 37 chr10 136064861 136065051 -4251714 + L1ME2 LINE L1 5810 5997 -167 1174 194 0 24 chr10 136065859 136066106 -4250659 - AluJo SINE Alu -20 292 52 216 0 0 0 chr10 136070037 136070061 -4246704 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1179 148 44 4 chr10 136072753 136072982 -4243783 - L1MB4 LINE L1 -6 6174 5937 2518 125 5 5 chr10 136074019 136074394 -4242371 + THE1C LTR MaLR 1 375 0 356 88 18 18 chr10 136075860 136075917 -4240848 - MER96 DNA MER1_type? 0 175 119 300 265 224 0 chr10 136079341 136079439 -4237326 - MIR3 SINE MIR -7 201 82 2029 172 23 23 chr10 136079450 136079761 -4237004 - MLT1B LTR MaLR 0 390 77 1690 229 88 0 chr10 136079761 136080145 -4236620 + MER47B DNA MER2_type 1 418 0 2029 172 23 23 chr10 136080145 136080223 -4236542 - MLT1B LTR MaLR -312 78 1 1017 286 8 4 chr10 136080747 136080995 -4235770 - MIR SINE MIR -6 256 8 593 208 0 7 chr10 136081226 136081370 -4235395 + CT-rich Low_complexity Low_complexity 4 146 0 2659 249 106 39 chr10 136081464 136082569 -4234196 + L1MC4 LINE L1 6456 7634 -408 238 253 36 0 chr10 136082616 136082699 -4234066 + L1MC4 LINE L1 7956 8041 -1 3443 127 25 10 chr10 136082743 136083262 -4233503 + MER1A DNA MER1_type 1 527 0 576 330 38 0 chr10 136083399 136083666 -4233099 + L1ME LINE L1 5522 5798 -323 2031 116 0 3 chr10 136085771 136086064 -4230701 + AluSg SINE Alu 1 292 -18 21 0 0 0 chr10 136089497 136089518 -4227247 + AT_rich Low_complexity Low_complexity 1 21 0 273 305 0 67 chr10 136090165 136090270 -4226495 + MIR SINE MIR 84 181 -81 2223 105 73 41 chr10 136090482 136090825 -4225940 - THE1B LTR MaLR 0 364 11 1470 179 57 3 chr10 136091476 136091773 -4224992 + L1MA5 LINE L1 5986 6298 -2 441 316 23 0 chr10 136092088 136092221 -4224544 + L2 LINE L2 3178 3313 0 413 258 81 16 chr10 136092232 136092356 -4224409 + L2 LINE L2 3141 3272 0 1336 180 18 0 chr10 136093751 136093968 -4222797 + MER58A DNA MER1_type 1 221 -3 512 327 37 14 chr10 136093995 136094209 -4222556 - MIR SINE MIR -11 251 33 192 188 0 0 chr10 136094482 136094514 -4222251 - L2 LINE L2 -2 3270 3239 297 209 0 0 chr10 136095115 136095182 -4221583 + CT-rich Low_complexity Low_complexity 2 68 0 34 0 0 0 chr10 136097414 136097448 -4219317 + AT_rich Low_complexity Low_complexity 1 34 0 294 50 0 0 chr10 136101276 136101316 -4215449 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr10 136103111 136103139 -4213626 + AT_rich Low_complexity Low_complexity 1 28 0 1562 181 8 4 chr10 136106587 136106852 -4209913 + Tigger7 DNA MER2_type 1 266 -284 562 162 10 20 chr10 136106853 136106952 -4209813 + Tigger7 DNA MER2_type 2394 2491 0 609 79 0 0 chr10 136108887 136108963 -4207802 - AluY SINE Alu -18 293 218 223 303 101 18 chr10 136110115 136110224 -4206541 + L2 LINE L2 3154 3271 -1 1906 115 3 14 chr10 136110825 136111121 -4205644 - AluY SINE Alu -18 293 1 210 197 33 98 chr10 136111374 136111435 -4205330 - MIR SINE MIR -68 140 84 301 211 0 21 chr10 136111889 136111984 -4204781 + CT-rich Low_complexity Low_complexity 4 96 0 233 29 29 0 chr10 136113277 136113311 -4203454 + (TG)n Simple_repeat Simple_repeat 2 36 0 326 264 36 77 chr10 136119102 136119322 -4197443 + L2 LINE L2 3085 3295 -18 220 339 68 47 chr10 136119490 136119726 -4197039 + L3 LINE CR1 16 256 -1321 195 42 0 0 chr10 136120832 136120856 -4195909 + (TA)n Simple_repeat Simple_repeat 2 25 0 2309 105 20 0 chr10 136123676 136124060 -4192705 + AluSq SINE Alu 1 390 0 191 295 37 111 chr10 136124406 136124677 -4192088 - L2 LINE L2 -52 3220 2970 254 322 89 0 chr10 136125096 136125186 -4191579 + MIR3 SINE MIR 87 184 -24 2473 70 0 0 chr10 136127643 136127944 -4188821 - AluY SINE Alu -10 301 1 294 73 0 0 chr10 136129842 136129883 -4186882 + (TG)n Simple_repeat Simple_repeat 1 41 0 2390 88 10 3 chr10 136129927 136130233 -4186532 + AluSq SINE Alu 1 308 -5 601 131 140 0 chr10 136130481 136130588 -4186177 + MLT1D LTR MaLR 71 192 -313 1260 304 129 35 chr10 136131037 136131987 -4184778 + L2 LINE L2 1781 2820 -494 250 325 48 0 chr10 136132108 136132234 -4184531 + L1MEc LINE L1 1536 1667 -4729 866 258 117 61 chr10 136132373 136133146 -4183619 + L1MEc LINE L1 1880 2669 -3546 30 45 0 0 chr10 136133170 136133214 -4183551 + AT_rich Low_complexity Low_complexity 1 44 0 270 227 40 40 chr10 136133216 136133392 -4183373 + (TA)n Simple_repeat Simple_repeat 2 177 0 244 316 19 71 chr10 136133448 136133492 -4183273 + L1MEc LINE L1 2753 2798 -3417 2476 122 19 26 chr10 136133492 136133870 -4182895 + THE1C LTR MaLR 1 375 0 244 316 19 71 chr10 136133870 136133980 -4182785 + L1MEc LINE L1 2798 2899 -3316 3076 233 48 23 chr10 136134186 136134688 -4182077 + L1M4 LINE L1 2217 2754 -3392 402 21 0 0 chr10 136134688 136134735 -4182030 + (CA)n Simple_repeat Simple_repeat 2 48 0 3076 233 48 23 chr10 136134735 136135139 -4181626 + L1M4 LINE L1 2754 3146 -3000 557 295 42 35 chr10 136135134 136135558 -4181207 + L1MEc LINE L1 2767 3193 -3022 * 1201 289 92 28 chr10 136135565 136136459 -4180306 + L1MEc LINE L1 3356 4306 -1909 35 63 0 0 chr10 136136459 136136522 -4180243 + AT_rich Low_complexity Low_complexity 1 63 0 269 216 0 0 chr10 136136842 136136893 -4179872 + L1ME LINE L1 5668 5718 -452 180 0 0 0 chr10 136136904 136136924 -4179841 + (GA)n Simple_repeat Simple_repeat 2 21 0 995 306 89 43 chr10 136136925 136138060 -4178705 + L1MEc LINE L1 4739 5936 -303 1024 217 120 67 chr10 136139621 136139914 -4176851 + MLT1C LTR MaLR 6 331 -136 1632 112 27 5 chr10 136139914 136140138 -4176627 + MER30 DNA MER1_type 1 229 -1 1024 217 120 67 chr10 136140138 136140277 -4176488 + MLT1C LTR MaLR 331 461 -6 25 31 0 0 chr10 136140311 136140343 -4176422 + AT_rich Low_complexity Low_complexity 1 32 0 488 214 0 0 chr10 136140544 136140633 -4176132 - Tigger7 DNA MER2_type -3 2488 2400 2850 181 29 18 chr10 136140634 136141063 -4175702 - Tigger7 DNA MER2_type -1967 520 83 2804 97 11 11 chr10 136141063 136141436 -4175329 + THE1C LTR MaLR 1 373 -2 2850 181 29 18 chr10 136141436 136141520 -4175245 - Tigger7 DNA MER2_type -2404 83 1 306 215 28 28 chr10 136141761 136141889 -4174876 + Charlie5 DNA MER1_type 1 93 -2519 2221 104 0 7 chr10 136141900 136142199 -4174566 + AluSg1 SINE Alu 1 297 -12 1561 187 49 68 chr10 136142307 136142676 -4174089 - MLT1A1 LTR MaLR 0 365 4 1592 280 105 23 chr10 136144355 136145392 -4171373 + L1M4 LINE L1 2223 3344 -2802 3307 167 26 14 chr10 136145412 136145804 -4170961 - L1MA9 LINE L1 -436 5876 5470 778 89 0 16 chr10 136145804 136145927 -4170838 + (TTC)n Simple_repeat Simple_repeat 2 122 0 3307 167 26 14 chr10 136145927 136146193 -4170572 - L1MA9 LINE L1 -842 5470 5209 909 150 43 32 chr10 136146193 136146380 -4170385 + L1MB1 LINE L1 5876 6064 -104 * 2837 162 22 33 chr10 136146374 136146815 -4169950 + L1PB4 LINE L1 4885 5329 -827 2389 86 0 6 chr10 136146815 136147128 -4169637 + AluY SINE Alu 1 311 0 2837 162 22 33 chr10 136147128 136147292 -4169473 + L1PB4 LINE L1 5329 5493 -663 2110 123 13 0 chr10 136147292 136147592 -4169173 + AluSq SINE Alu 1 304 -9 2837 162 22 33 chr10 136147592 136147878 -4168887 + L1PB4 LINE L1 5493 5776 -380 207 0 0 0 chr10 136147878 136147901 -4168864 + (TG)n Simple_repeat Simple_repeat 2 24 0 189 147 0 0 chr10 136147923 136147957 -4168808 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 184 188 0 0 chr10 136148071 136148103 -4168662 + CT-rich Low_complexity Low_complexity 2 33 0 285 295 33 0 chr10 136148132 136148254 -4168511 + T-rich Low_complexity Low_complexity 5 130 0 222 286 0 0 chr10 136148329 136148392 -4168373 + T-rich Low_complexity Low_complexity 1 63 0 243 119 34 17 chr10 136148733 136148792 -4167973 + (CA)n Simple_repeat Simple_repeat 1 60 0 2326 149 19 16 chr10 136148792 136149155 -4167610 + L1PB4 LINE L1 5782 6145 -11 1880 263 109 24 chr10 136149188 136149975 -4166790 + L1ME3 LINE L1 5262 6115 -47 29 47 0 0 chr10 136150600 136150643 -4166122 + AT_rich Low_complexity Low_complexity 1 43 0 301 203 0 73 chr10 136150730 136150827 -4165938 + L1M LINE L1 5258 5347 -2478 255 259 17 0 chr10 136151402 136151460 -4165305 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 292 302 88 28 chr10 136151744 136151926 -4164839 - L1ME LINE L1 -543 5578 5386 1202 272 53 15 chr10 136152091 136152620 -4164145 + L1M4 LINE L1 3792 4340 -1806 5888 108 46 15 chr10 136152620 136153640 -4163125 + L1PA16 LINE L1 5114 6157 -9 258 171 40 13 chr10 136153655 136153731 -4163034 - L1M4 LINE L1 -1686 4460 4383 252 274 147 11 chr10 136154136 136154231 -4162534 - L2 LINE L2 -8 3305 3198 511 195 127 0 chr10 136155951 136156069 -4160696 - MER69 DNA AcHobo 0 2526 2394 468 216 8 96 chr10 136156353 136156478 -4160287 + MER81 DNA DNA 1 114 0 574 202 168 70 chr10 136157383 136157740 -4159025 - L1MC5 LINE L1 -51 7910 7519 264 242 16 0 chr10 136157752 136157814 -4158951 + CT-rich Low_complexity Low_complexity 1 63 0 855 209 48 5 chr10 136157953 136158140 -4158625 - MER20 DNA MER1_type -3 216 22 226 214 24 0 chr10 136159041 136159125 -4157640 + GA-rich Low_complexity Low_complexity 4 89 0 180 125 0 0 chr10 136159411 136159443 -4157322 + (A)n Simple_repeat Simple_repeat 1 32 0 296 361 74 36 chr10 136159692 136160113 -4156652 + L2 LINE L2 926 1362 -1952 273 329 46 26 chr10 136160123 136160275 -4156490 - LTR16C LTR ERVL 0 491 337 6163 186 28 19 chr10 136160328 136161611 -4155154 - L1MA7 LINE L1 -1204 4942 3649 4585 160 73 35 chr10 136161608 136162661 -4154104 + L1MA7 LINE L1 4952 6062 -229 * 2334 115 3 0 chr10 136162661 136162966 -4153799 + AluSg SINE Alu 1 306 -4 4585 160 73 35 chr10 136162966 136163205 -4153560 + L1MA7 LINE L1 6062 6291 0 40 0 0 0 chr10 136163287 136163327 -4153438 + AT_rich Low_complexity Low_complexity 1 40 0 253 355 19 9 chr10 136164019 136164126 -4152639 + L2 LINE L2 3160 3267 -5 549 293 72 7 chr10 136164348 136164638 -4152127 + L1M4 LINE L1 2669 2977 -3169 346 263 143 8 chr10 136164639 136164772 -4151993 + L1ME2 LINE L1 6000 6150 -14 246 260 78 45 chr10 136164865 136165019 -4151746 + L1M4 LINE L1 3111 3269 -2877 3323 248 72 45 chr10 136165369 136166314 -4150451 + L1ME3A LINE L1 2327 3328 -2818 1276 238 13 3 chr10 136166314 136166616 -4150149 + AluJb SINE Alu 1 305 -7 3323 248 72 45 chr10 136166616 136167165 -4149600 + L1ME3A LINE L1 3328 3861 -2285 1417 284 119 32 chr10 136167204 136167538 -4149227 + L1ME3A LINE L1 4738 5042 -1128 2193 135 0 0 chr10 136167538 136167842 -4148923 - AluSg SINE Alu -6 304 1 1417 284 119 32 chr10 136167842 136168612 -4148153 + L1ME3A LINE L1 5042 5940 -230 395 289 65 70 chr10 136168768 136169381 -4147384 + L1M4 LINE L1 3348 3957 -2189 332 257 57 43 chr10 136169942 136170152 -4146613 + L1ME3A LINE L1 4421 4633 -1513 479 316 119 30 chr10 136170785 136171180 -4145585 + L2 LINE L2 2430 2859 -455 415 303 107 33 chr10 136171844 136172181 -4144584 + L1ME3A LINE L1 5582 5943 -227 2234 105 0 37 chr10 136172516 136172840 -4143925 + AluSx SINE Alu 1 312 0 323 311 74 0 chr10 136173973 136174108 -4142657 + L1M4 LINE L1 4043 4187 -1959 2538 52 3 0 chr10 136174379 136174687 -4142078 + AluY SINE Alu 1 309 -2 779 234 72 47 chr10 136174996 136175355 -4141410 - L1ME1 LINE L1 -5 6161 5794 244 229 0 14 chr10 136175973 136176043 -4140722 + L1M LINE L1 5347 5415 -890 190 305 84 0 chr10 136176949 136177044 -4139721 - MIR SINE MIR -156 106 4 199 259 110 64 chr10 136177103 136177339 -4139426 - L2 LINE L2 -356 2958 2712 235 369 27 9 chr10 136180193 136180304 -4136461 + MIR SINE MIR 35 147 -61 347 288 47 39 chr10 136181174 136181407 -4135358 + MER112 DNA MER1_type 13 247 -13 578 133 0 0 chr10 136181410 136181508 -4135257 - L1ME1 LINE L1 -683 5483 5386 342 286 0 0 chr10 136181884 136181982 -4134783 + CT-rich Low_complexity Low_complexity 2 99 0 2026 121 0 4 chr10 136182764 136183080 -4133685 - AluSx SINE Alu 0 320 6 1897 171 9 12 chr10 136183398 136183732 -4133033 - MER44D DNA MER2_type 0 609 7 402 279 111 34 chr10 136184596 136184858 -4131907 - LTR16A LTR ERVL -77 373 92 261 336 55 0 chr10 136185199 136185345 -4131420 + MIR SINE MIR 37 190 -72 2102 119 7 3 chr10 136185987 136186281 -4130484 + AluSg SINE Alu 1 295 -15 207 247 247 0 chr10 136186372 136186449 -4130316 - L2 LINE L2 -1 3312 3217 725 112 9 0 chr10 136186600 136186716 -4130049 + AluSg/x SINE Alu 194 310 0 315 0 0 0 chr10 136188805 136188840 -4127925 + (GA)n Simple_repeat Simple_repeat 2 36 0 2185 126 0 0 chr10 136190976 136191270 -4125495 - AluSx SINE Alu -18 294 1 243 0 0 0 chr10 136194464 136194491 -4122274 + (A)n Simple_repeat Simple_repeat 1 27 0 232 219 109 0 chr10 136195626 136195690 -4121075 + L2 LINE L2 3216 3286 -27 339 281 71 78 chr10 136196200 136196990 -4119775 + L1MC4a LINE L1 4136 4919 -1227 201 146 62 0 chr10 136197176 136197224 -4119541 + MER91B DNA MER1_type 80 130 -60 22 56 0 0 chr10 136197436 136197472 -4119293 + AT_rich Low_complexity Low_complexity 1 36 0 21 71 0 0 chr10 136197633 136197675 -4119090 + AT_rich Low_complexity Low_complexity 1 42 0 183 246 123 0 chr10 136197799 136197856 -4118909 + L2 LINE L2 3216 3279 -34 222 294 0 0 chr10 136197895 136197946 -4118819 + MER91B DNA MER1_type 129 179 -11 216 0 0 0 chr10 136198181 136198205 -4118560 + (A)n Simple_repeat Simple_repeat 1 24 0 339 337 99 47 chr10 136198368 136198813 -4117952 + L1MC4a LINE L1 5373 5840 -1968 202 189 0 0 chr10 136199859 136199896 -4116869 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr10 136200579 136200611 -4116154 + AT_rich Low_complexity Low_complexity 1 32 0 657 269 101 48 chr10 136200678 136201113 -4115652 + L1MC4 LINE L1 7491 7948 -94 3931 194 67 23 chr10 136201922 136202120 -4114645 - L1MB7 LINE L1 -23 6161 5973 1794 143 3 49 chr10 136202120 136202428 -4114337 - AluJb SINE Alu -18 294 1 3931 194 67 23 chr10 136202428 136203918 -4112847 - L1MB7 LINE L1 -211 5973 4393 832 250 95 16 chr10 136204008 136204260 -4112505 - L1MB7 LINE L1 -1917 4229 3958 303 240 110 20 chr10 136204408 136204554 -4112211 + L1ME4a LINE L1 5957 6115 -6 261 139 0 0 chr10 136204620 136204663 -4112102 + (GA)n Simple_repeat Simple_repeat 1 43 0 228 167 0 0 chr10 136206012 136206048 -4110717 - MER58 DNA MER1_type -2 2418 2383 * 1099 218 34 19 chr10 136206037 136206299 -4110466 - MER58 DNA MER1_type -57 284 19 25 65 0 0 chr10 136208144 136208190 -4108575 + GC_rich Low_complexity Low_complexity 1 46 0 200 250 0 0 chr10 136211571 136211611 -4105154 + (TAA)n Simple_repeat Simple_repeat 1 40 0 340 305 42 0 chr10 136215098 136215216 -4101549 + MIR SINE MIR 63 185 -77 378 291 22 34 chr10 136216602 136216781 -4099984 + (TATG)n Simple_repeat Simple_repeat 2 178 0 296 238 9 0 chr10 136218605 136218710 -4098055 + CT-rich Low_complexity Low_complexity 3 108 0 704 210 19 1 chr10 136221127 136221303 -4095462 + L1ME1 LINE L1 5663 5840 -322 265 279 130 25 chr10 136222035 136222196 -4094569 + MIR SINE MIR 79 256 -6 194 234 0 13 chr10 136222662 136222739 -4094026 + (CA)n Simple_repeat Simple_repeat 1 76 0 343 212 161 17 chr10 136222739 136222857 -4093908 - MIR SINE MIR -58 204 70 579 221 79 107 chr10 136223606 136224070 -4092695 - MLT1A2 LTR MaLR 0 451 6 402 340 65 33 chr10 136224211 136224700 -4092065 - HAL1 LINE L1 -767 1740 1236 1205 205 55 3 chr10 136228856 136229163 -4087602 - MER33 DNA MER1_type 0 324 2 195 42 0 0 chr10 136230556 136230580 -4086185 + (CA)n Simple_repeat Simple_repeat 1 24 0 353 186 87 20 chr10 136230584 136230705 -4086060 + L1MC3 LINE L1 1996 6926 -1139 303 93 0 0 chr10 136230709 136230752 -4086013 + (GA)n Simple_repeat Simple_repeat 2 44 0 363 89 0 0 chr10 136233265 136233321 -4083444 + (GA)n Simple_repeat Simple_repeat 1 56 0 182 297 62 16 chr10 136234942 136235006 -4081759 + L2 LINE L2 3186 3252 -20 225 344 121 25 chr10 136235249 136235406 -4081359 + MIR SINE MIR 79 250 -12 258 326 33 0 chr10 136235656 136235748 -4081017 - L1ME4a LINE L1 -58 6063 5969 239 163 0 20 chr10 136235787 136235836 -4080929 - L1M3 LINE L1 -516 5818 5771 319 205 68 75 chr10 136236063 136236308 -4080457 - L1M3 LINE L1 -851 5508 5264 282 241 0 0 chr10 136239306 136239393 -4077372 + (CA)n Simple_repeat Simple_repeat 1 87 0 460 293 122 24 chr10 136243418 136243623 -4073142 - MIR SINE MIR -24 238 14 258 239 28 14 chr10 136245170 136245241 -4071524 - L2 LINE L2 -8 3264 3193 1655 151 0 27 chr10 136246377 136246676 -4070089 - AluJb SINE Alu -21 291 1 282 208 231 16 chr10 136247018 136247182 -4069583 - MIR3 SINE MIR -52 210 3 188 313 82 45 chr10 136247919 136248053 -4068712 - L2 LINE L2 -92 3180 3042 193 388 25 0 chr10 136249873 136249953 -4066812 + MIR SINE MIR 33 114 -148 2567 224 58 58 chr10 136250005 136250905 -4065860 + L1ME1 LINE L1 4126 5025 -1121 1124 247 76 0 chr10 136250896 136251200 -4065565 + L1ME1 LINE L1 5543 5869 -297 * 769 275 147 36 chr10 136251237 136251685 -4065080 + L1ME1 LINE L1 5651 6148 -18 416 165 82 0 chr10 136252041 136252126 -4064639 + MLT1B LTR MaLR 1 92 -298 1081 99 19 0 chr10 136252126 136252288 -4064477 - AluY SINE Alu -13 298 134 1561 200 9 25 chr10 136252288 136252603 -4064162 + MLT1B LTR MaLR 81 390 0 1985 117 3 0 chr10 136254543 136254864 -4061901 + AluSp SINE Alu 1 322 0 324 250 22 0 chr10 136256086 136256178 -4060587 - MLT1K LTR MaLR -3 585 492 186 143 0 0 chr10 136256271 136256306 -4060459 + (TC)n Simple_repeat Simple_repeat 1 35 0 206 118 0 0 chr10 136257541 136257575 -4059190 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 267 253 13 38 chr10 136257719 136257798 -4058967 + L2 LINE L2 3194 3270 -2 187 263 25 38 chr10 136262472 136262552 -4054213 - MER5A DNA MER1_type -28 161 83 747 193 128 11 chr10 136263629 136263816 -4052949 + L1MD3 LINE L1 7714 7922 -73 203 295 155 70 chr10 136264044 136264244 -4052521 + L2 LINE L2 2837 3053 -219 766 253 23 0 chr10 136265269 136265443 -4051322 - MER45A DNA AcHobo 0 178 1 216 0 0 0 chr10 136267941 136267965 -4048800 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 186 344 16 0 chr10 136269205 136269269 -4047496 - L2 LINE L2 -21 3251 3187 423 0 0 0 chr10 136269888 136269935 -4046830 + (TG)n Simple_repeat Simple_repeat 1 47 0 2133 132 24 43 chr10 136270191 136270562 -4046203 + THE1B LTR MaLR 1 364 0 7196 88 2 4 chr10 136270563 136271492 -4045273 + THE1B-int LTR MaLR 2 928 -652 1327 113 5 0 chr10 136271488 136271674 -4045091 + THE1B-int LTR MaLR 1394 1580 0 * 2274 137 19 25 chr10 136271674 136272040 -4044725 + THE1B LTR MaLR 1 364 0 510 255 53 43 chr10 136273203 136273391 -4043374 - MIR SINE MIR -29 233 44 23 33 0 0 chr10 136274723 136274753 -4042012 + AT_rich Low_complexity Low_complexity 1 30 0 2519 174 28 60 chr10 136275421 136276155 -4040610 + L1MA9 LINE L1 5588 6258 -33 2256 114 0 0 chr10 136276499 136276805 -4039960 + AluSq SINE Alu 1 306 -7 1103 245 19 7 chr10 136277880 136278242 -4038523 - MER63 DNA MER1_type -2 1058 7 692 274 63 36 chr10 136279982 136280298 -4036467 + MLT1I LTR MaLR 93 404 -5 1794 149 40 0 chr10 136280441 136280716 -4036049 - AluJb SINE Alu -26 286 1 428 192 0 39 chr10 136280716 136280794 -4035971 + AluJo SINE Alu 115 189 -123 2224 123 3 0 chr10 136281306 136281615 -4035150 - AluSg SINE Alu 0 310 1 5897 51 0 14 chr10 136281830 136282569 -4034196 - L1PA7 LINE L1 0 6154 5426 5266 172 27 18 chr10 136282755 136283841 -4032924 - L1MA9 LINE L1 0 6312 5218 514 223 99 33 chr10 136283874 136284085 -4032680 - L1MC/D LINE L1 -2005 5803 5579 216 167 0 0 chr10 136284332 136284380 -4032385 + T-rich Low_complexity Low_complexity 2 49 0 2052 128 0 29 chr10 136284856 136285168 -4031597 - AluSg SINE Alu -7 303 1 242 284 9 37 chr10 136286516 136286625 -4030140 + (TATATG)n Simple_repeat Simple_repeat 1 106 0 1673 279 59 60 chr10 136286826 136288616 -4028149 + L1ME3A LINE L1 4076 5865 -305 2352 107 0 0 chr10 136288616 136288924 -4027841 - AluSg SINE Alu -2 308 1 1673 279 59 60 chr10 136288924 136289225 -4027540 + L1ME3A LINE L1 5865 6165 -5 523 306 26 21 chr10 136290056 136290249 -4026516 + L1ME LINE L1 5567 5760 -361 461 162 203 7 chr10 136290356 136290504 -4026261 - MER69A DNA AcHobo 0 177 1 21 36 0 0 chr10 136291704 136291732 -4025033 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 136291782 136291811 -4024954 + AT_rich Low_complexity Low_complexity 1 29 0 666 286 132 8 chr10 136292013 136292384 -4024381 - LTR33 LTR ERVL -67 454 38 375 213 228 81 chr10 136292892 136293028 -4023737 + MER20 DNA MER1_type 3 158 -61 429 122 0 0 chr10 136293131 136293205 -4023560 + (TGGA)n Simple_repeat Simple_repeat 2 75 0 735 268 114 28 chr10 136294987 136295304 -4021461 - MLT1C LTR MaLR -2 465 122 467 216 0 0 chr10 136295301 136295388 -4021377 + MLT2D LTR ERVL 5 91 -323 451 133 13 0 chr10 136295388 136295463 -4021302 + MLT2B2 LTR ERVL 1 76 -439 2322 81 3 0 chr10 136295468 136295752 -4021013 + AluSx SINE Alu 7 291 -21 258 32 0 0 chr10 136295771 136295802 -4020963 + (CA)n Simple_repeat Simple_repeat 2 32 0 1518 224 87 37 chr10 136295846 136296327 -4020438 + MLT1D LTR MaLR 1 505 0 510 281 0 0 chr10 136296327 136296635 -4020130 + (CA)n Simple_repeat Simple_repeat 1 308 0 273 256 0 0 chr10 136296727 136296809 -4019956 + (CA)n Simple_repeat Simple_repeat 1 82 0 275 183 0 33 chr10 136296812 136296872 -4019893 - L1MC4 LINE L1 -1339 6703 6646 295 213 0 16 chr10 136297793 136297854 -4018911 - LTR33 LTR ERVL -6 515 456 1409 178 11 81 chr10 136298750 136299098 -4017667 - MLT2D LTR ERVL 0 414 91 21 0 0 0 chr10 136300270 136300291 -4016474 + AT_rich Low_complexity Low_complexity 1 21 0 270 357 28 0 chr10 136300898 136301041 -4015724 + L3 LINE CR1 1085 1231 -346 445 198 0 59 chr10 136303795 136303896 -4012869 + AluJ/FLAM SINE Alu 6 100 -212 324 136 7 17 chr10 136303907 136303962 -4012803 - AluJ/FLAM SINE Alu -207 95 51 201 154 0 0 chr10 136303978 136304017 -4012748 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 214 315 22 11 chr10 136304942 136305034 -4011731 - L2 LINE L2 -5 3267 3175 * 417 311 88 13 chr10 136305001 136305239 -4011526 - MIR SINE MIR -5 257 2 180 329 22 29 chr10 136305359 136305496 -4011269 + L2 LINE L2 2826 2961 -311 276 255 37 37 chr10 136306242 136306403 -4010362 + LTR16A1 LTR ERVL 296 456 -1 1113 232 53 38 chr10 136306631 136307028 -4009737 - MLT1C LTR MaLR 0 467 65 2300 158 15 49 chr10 136307742 136308182 -4008583 + MSTC LTR MaLR 3 427 -1 23 68 0 0 chr10 136308713 136308757 -4008008 + AT_rich Low_complexity Low_complexity 1 44 0 2301 114 3 0 chr10 136309043 136309349 -4007416 - AluSx SINE Alu -4 308 2 248 224 0 0 chr10 136311112 136311161 -4005604 + HsTC2 DNA Tc2 36 84 -1814 281 258 75 11 chr10 136311260 136311353 -4005412 - MIR SINE MIR -115 147 49 287 136 17 0 chr10 136311593 136311652 -4005113 + GA-rich Low_complexity Low_complexity 2 61 0 261 243 0 0 chr10 136313748 136313822 -4002943 + (TA)n Simple_repeat Simple_repeat 1 74 0 333 304 13 0 chr10 136313837 136313995 -4002770 + (CATATA)n Simple_repeat Simple_repeat 6 165 0 * 352 276 17 28 chr10 136313914 136314095 -4002670 + (TA)n Simple_repeat Simple_repeat 2 180 0 875 200 3 0 chr10 136314100 136314498 -4002267 + (TGGA)n Simple_repeat Simple_repeat 1 399 0 648 244 0 0 chr10 136314510 136314690 -4002075 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 2300 82 0 0 chr10 136315405 136315686 -4001079 - AluY SINE Alu -26 285 5 1324 239 45 58 chr10 136317804 136317929 -3998836 + MLT1C LTR MaLR 10 135 -332 2123 150 5 53 chr10 136317929 136318294 -3998471 - THE1C LTR MaLR 0 375 29 2164 106 0 0 chr10 136318294 136318569 -3998196 + AluSx SINE Alu 21 295 -17 2123 150 5 53 chr10 136318569 136318597 -3998168 - THE1C LTR MaLR -346 29 1 1324 239 45 58 chr10 136318597 136318935 -3997830 + MLT1C LTR MaLR 135 467 0 1945 132 3 39 chr10 136319920 136320231 -3996534 - AluSx SINE Alu -12 300 1 8725 114 15 5 chr10 136326318 136327605 -3989160 + HSMAR2 DNA Mariner 2 1301 -1 302 340 78 40 chr10 136328389 136328886 -3987879 + L1ME LINE L1 5311 5826 -295 1939 132 0 17 chr10 136328939 136329255 -3987510 + AluSg SINE Alu 1 311 0 498 222 0 0 chr10 136329301 136329391 -3987374 - MER44D DNA MER2_type -2 603 514 259 263 0 0 chr10 136329391 136329448 -3987317 - MER44D DNA MER2_type -44 561 505 1255 191 111 49 chr10 136329466 136329592 -3987173 + MER2 DNA MER2_type 1 118 -227 1517 106 55 0 chr10 136329592 136329810 -3986955 + MER30 DNA MER1_type 1 230 0 1255 191 111 49 chr10 136329810 136330008 -3986757 + MER2 DNA MER2_type 118 345 0 1071 148 85 36 chr10 136330010 136330233 -3986532 - MER44D DNA MER2_type -105 504 1 2157 125 3 6 chr10 136330256 136330632 -3986133 + AluSq SINE Alu 1 375 0 235 314 13 58 chr10 136331323 136331479 -3985286 + MER5A DNA MER1_type 7 155 -34 231 88 0 0 chr10 136331845 136331879 -3984886 + (TC)n Simple_repeat Simple_repeat 1 34 0 1509 188 4 0 chr10 136331884 136332145 -3984620 - AluSq SINE Alu -51 262 1 341 291 8 16 chr10 136333346 136333473 -3983292 + MIR SINE MIR 25 150 -112 204 258 0 16 chr10 136336289 136336351 -3980414 + (TA)n Simple_repeat Simple_repeat 2 62 0 529 283 89 40 chr10 136341179 136341628 -3975137 + L1MC4 LINE L1 7322 7893 -149 222 346 105 13 chr10 136342204 136342432 -3974333 + L2 LINE L2 2726 2974 -340 492 277 66 24 chr10 136342442 136342655 -3974110 + MIR SINE MIR 31 252 -10 285 128 0 0 chr10 136342655 136342702 -3974063 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 239 288 0 0 chr10 136343356 136343415 -3973350 + L2 LINE L2 3248 3306 -7 110 52 0 0 chr10 136344690 136344863 -3971902 + AT_rich Low_complexity Low_complexity 1 173 0 228 67 0 0 chr10 136345025 136345055 -3971710 + (TG)n Simple_repeat Simple_repeat 1 30 0 324 277 41 83 chr10 136345056 136345298 -3971467 - L1MC4a LINE L1 -1876 5932 5701 318 339 52 39 chr10 136345348 136345578 -3971187 - L1MC4a LINE L1 -532 5589 5357 342 314 94 49 chr10 136345848 136346316 -3970449 - L1MC4a LINE L1 -1082 5064 4576 215 250 39 0 chr10 136346491 136346543 -3970222 + (CATG)n Simple_repeat Simple_repeat 2 55 0 311 344 81 5 chr10 136346623 136346809 -3969956 + L1ME2 LINE L1 686 885 -5511 266 0 29 0 chr10 136347045 136347079 -3969686 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 322 316 43 57 chr10 136347083 136347518 -3969247 + L1ME2 LINE L1 1041 1620 -4773 * 4852 240 45 66 chr10 136347517 136348008 -3968757 + L1ME2 LINE L1 3035 3535 -2698 796 167 39 0 chr10 136348008 136348164 -3968601 - L1MA8 LINE L1 -5 6286 6125 4852 240 45 66 chr10 136348164 136349685 -3967080 + L1ME2 LINE L1 3535 4951 -1282 180 0 0 0 chr10 136349685 136349705 -3967060 + (TAA)n Simple_repeat Simple_repeat 2 21 0 4852 240 45 66 chr10 136349705 136350927 -3965838 + L1ME2 LINE L1 4951 6198 -35 645 276 123 84 chr10 136351921 136352410 -3964355 + MLT1K LTR MaLR 81 588 0 292 213 0 0 chr10 136352597 136352658 -3964107 + HAL1b LINE L1 604 664 -684 36 0 0 0 chr10 136358943 136358979 -3957786 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 136360404 136360428 -3956337 + AT_rich Low_complexity Low_complexity 1 24 0 607 222 0 0 chr10 136361675 136361783 -3954982 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3621 125 36 112 chr10 136361774 136362588 -3954177 + Tigger3(Golem) DNA MER2_type 2278 3029 0 425 299 71 0 chr10 136363659 136363813 -3952952 - Charlie8 DNA MER1_type -2214 203 39 24 85 0 0 chr10 136364027 136364086 -3952679 + AT_rich Low_complexity Low_complexity 1 59 0 384 266 0 0 chr10 136364270 136364364 -3952401 - MIR SINE MIR -85 177 84 246 320 51 16 chr10 136364678 136364811 -3951954 + MIR SINE MIR 17 150 -61 1144 179 0 0 chr10 136367714 136367904 -3948861 + MLT1B LTR MaLR 1 190 -200 1092 202 111 98 chr10 136367904 136368058 -3948707 - MER31A LTR ERV1 0 485 334 2029 129 4 0 chr10 136368058 136368337 -3948428 - AluSx SINE Alu -32 280 1 1092 202 111 98 chr10 136368337 136368588 -3948177 - MER31A LTR ERV1 -151 334 75 435 335 47 12 chr10 136368688 136369049 -3947716 + ERVL LTR ERVL 4161 4525 -1129 258 357 46 15 chr10 136369179 136369442 -3947323 + ERVL LTR ERVL 4708 4978 -786 342 138 0 0 chr10 136370783 136370841 -3945924 + (CA)n Simple_repeat Simple_repeat 1 58 0 185 0 40 0 chr10 136372701 136372726 -3944039 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 434 213 0 0 chr10 136372726 136372820 -3943945 - L1MB4 LINE L1 -4 6176 6083 507 310 95 53 chr10 136373140 136373647 -3943118 - L2 LINE L2 -592 2722 2195 947 168 6 12 chr10 136373819 136373980 -3942785 - AluJb SINE Alu -16 296 137 233 308 26 0 chr10 136374792 136374870 -3941895 + MIR SINE MIR 71 150 -112 2178 106 0 7 chr10 136374877 136375219 -3941546 - AluSx SINE Alu 0 340 1 1821 143 32 4 chr10 136375228 136375508 -3941257 - AluJo SINE Alu -24 288 1 199 288 38 0 chr10 136376644 136376724 -3940041 - L2 LINE L2 -529 2785 2703 299 286 82 51 chr10 136381803 136381999 -3934766 + MIR SINE MIR 47 248 -14 188 258 172 43 chr10 136384075 136384168 -3932597 - L2 LINE L2 0 3272 3168 457 310 56 0 chr10 136385139 136385281 -3931484 + L2 LINE L2 3123 3272 0 369 274 154 22 chr10 136385299 136385617 -3931148 - L2 LINE L2 -802 2512 2153 271 246 29 0 chr10 136385761 136385830 -3930935 - L2 LINE L2 0 3313 3243 384 286 0 0 chr10 136389935 136390210 -3926555 + (CA)n Simple_repeat Simple_repeat 1 275 0 345 246 0 0 chr10 136390226 136390344 -3926421 + (CA)n Simple_repeat Simple_repeat 1 118 0 570 233 0 0 chr10 136390368 136390548 -3926217 + (CA)n Simple_repeat Simple_repeat 1 180 0 228 243 0 0 chr10 136390570 136390644 -3926121 + (CA)n Simple_repeat Simple_repeat 1 74 0 414 285 0 0 chr10 136390692 136390986 -3925779 + (CA)n Simple_repeat Simple_repeat 1 294 0 21 36 0 0 chr10 136391751 136391779 -3924986 + AT_rich Low_complexity Low_complexity 1 28 0 221 231 29 13 chr10 136391969 136392217 -3924548 + C-rich Low_complexity Low_complexity 1 252 0 252 307 20 0 chr10 136392346 136392447 -3924318 + (CA)n Simple_repeat Simple_repeat 1 103 0 345 259 49 97 chr10 136393174 136393557 -3923208 + L1M2 LINE L1 1385 1908 -761 410 243 124 31 chr10 136394266 136394492 -3922273 + L1M2 LINE L1 2807 3053 -3093 396 289 148 66 chr10 136394496 136394860 -3921905 + L1M2 LINE L1 3106 3499 -2647 356 333 86 40 chr10 136394964 136395393 -3921372 + L1M2 LINE L1 3775 4223 -1923 2331 109 31 14 chr10 136395462 136395820 -3920945 + THE1B LTR MaLR 1 364 0 378 0 0 0 chr10 136395975 136396017 -3920748 + (TG)n Simple_repeat Simple_repeat 2 43 0 1485 173 79 18 chr10 136396606 136396936 -3919829 + L1MC2 LINE L1 5994 6343 -1 2009 167 46 0 chr10 136396944 136397291 -3919474 + L1PA16 LINE L1 5800 6162 -4 569 218 0 45 chr10 136399417 136399550 -3917215 - MER3 DNA MER1_type 0 209 83 1174 247 59 15 chr10 136400343 136400742 -3916023 - MLT1H LTR MaLR 0 549 19 1323 123 0 58 chr10 136400752 136400995 -3915770 - L1MB8 LINE L1 -5 6173 5945 333 47 0 0 chr10 136402162 136402205 -3914560 + (GA)n Simple_repeat Simple_repeat 1 43 0 209 381 38 51 chr10 136403170 136403485 -3913280 - L2 LINE L2 -25 3247 2937 1934 155 152 8 chr10 136403985 136404359 -3912406 + MSTA LTR MaLR 1 428 0 187 234 0 0 chr10 136405057 136405104 -3911661 - L2 LINE L2 -221 3051 3005 1412 250 55 25 chr10 136406911 136407223 -3909542 + L1MCc LINE L1 6 336 -6087 893 107 61 0 chr10 136407223 136407354 -3909411 + MER85 DNA T2_type 1 139 0 1412 250 55 25 chr10 136407354 136407477 -3909288 + L1MCc LINE L1 336 454 -5969 3209 264 52 37 chr10 136407768 136410087 -3906678 + L1MCc LINE L1 821 3341 -3600 3938 37 11 0 chr10 136410148 136410613 -3906152 - L1PA4 LINE L1 0 6155 5686 481 264 81 11 chr10 136411199 136411373 -3905392 - MIR SINE MIR -30 232 47 212 196 22 0 chr10 136414097 136414143 -3902622 + (TG)n Simple_repeat Simple_repeat 2 48 0 1907 138 55 28 chr10 136414916 136415279 -3901486 + THE1C LTR MaLR 1 373 -2 1866 167 0 0 chr10 136416414 136416707 -3900058 - AluJo SINE Alu -11 301 9 231 250 147 0 chr10 136416822 136416890 -3899875 - MIR SINE MIR -108 154 77 269 263 53 46 chr10 136417982 136418095 -3898670 + MIR SINE MIR 38 152 -56 308 263 74 45 chr10 136420897 136421077 -3895688 - MIR SINE MIR -62 200 15 813 284 19 15 chr10 136423387 136423651 -3893114 + L1MDa LINE L1 19 283 -6257 180 0 0 0 chr10 136423651 136423671 -3893094 + (A)n Simple_repeat Simple_repeat 1 20 0 3069 240 94 30 chr10 136423730 136424731 -3892034 + L1MD2 LINE L1 5090 6181 -178 225 65 0 0 chr10 136424731 136424762 -3892003 + (CA)n Simple_repeat Simple_repeat 2 32 0 3069 240 94 30 chr10 136424762 136424944 -3891821 + L1MD2 LINE L1 6181 6350 -9 204 208 42 0 chr10 136425255 136425327 -3891438 + (TA)n Simple_repeat Simple_repeat 2 76 0 309 304 17 28 chr10 136425510 136425609 -3891156 + (TATATG)n Simple_repeat Simple_repeat 2 100 -80 2357 122 119 8 chr10 136425609 136425994 -3890771 - MSTA LTR MaLR 0 428 1 309 304 17 28 chr10 136425994 136426075 -3890690 + (TATATG)n Simple_repeat Simple_repeat 100 180 0 272 314 10 49 chr10 136428182 136428284 -3888481 + MIR SINE MIR 73 170 -92 479 17 17 0 chr10 136428601 136428661 -3888104 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 211 238 16 0 chr10 136428698 136428828 -3887937 + CT-rich Low_complexity Low_complexity 1 132 0 183 260 0 20 chr10 136428868 136428918 -3887847 - MIR SINE MIR -56 152 104 828 36 79 0 chr10 136429146 136429311 -3887454 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 962 6 78 0 chr10 136429323 136429490 -3887275 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2196 125 36 31 chr10 136430809 136431169 -3885596 + THE1B LTR MaLR 1 362 -2 268 111 0 0 chr10 136431391 136431454 -3885311 - Alu SINE Alu 0 307 245 1086 83 0 21 chr10 136431455 136431600 -3885165 - AluY SINE Alu -169 142 1 33 0 0 0 chr10 136431986 136432019 -3884746 + AT_rich Low_complexity Low_complexity 1 33 0 2397 212 47 51 chr10 136436032 136436716 -3880049 - L1MA10 LINE L1 -1 6333 5653 195 300 156 0 chr10 136436832 136436922 -3879843 - L2 LINE L2 -31 3241 3138 1111 160 43 17 chr10 136438519 136438915 -3877850 + MER31A LTR ERV1 1 485 0 234 203 0 72 chr10 136441835 136441904 -3874861 - L1MC4 LINE L1 -1339 6703 6640 1332 165 89 186 chr10 136441905 136442468 -3874297 - MLT2B3 LTR ERVL -46 508 1 222 366 14 21 chr10 136443908 136444050 -3872715 - MIR SINE MIR -41 221 81 192 292 31 15 chr10 136444137 136444202 -3872563 - MIR3 SINE MIR -29 179 114 461 216 0 6 chr10 136445899 136445949 -3870816 + CT-rich Low_complexity Low_complexity 1 50 -130 1886 137 25 0 chr10 136445949 136446227 -3870538 - AluSx SINE Alu -27 285 1 461 216 0 6 chr10 136446227 136446357 -3870408 + CT-rich Low_complexity Low_complexity 50 180 0 321 47 0 0 chr10 136446360 136446403 -3870362 + (CA)n Simple_repeat Simple_repeat 1 43 0 1923 169 16 0 chr10 136446743 136447050 -3869715 + AluSx SINE Alu 1 312 0 195 341 171 14 chr10 136447149 136447366 -3869399 - MIR SINE MIR -10 252 2 1860 134 46 36 chr10 136447580 136447887 -3868878 + AluJo SINE Alu 1 310 -2 199 85 43 43 chr10 136447900 136447947 -3868818 + A-rich Low_complexity Low_complexity 2 48 0 243 296 0 0 chr10 136448881 136449050 -3867715 + (CA)n Simple_repeat Simple_repeat 2 170 0 335 275 0 11 chr10 136449084 136449266 -3867499 + (CA)n Simple_repeat Simple_repeat 1 180 0 278 310 0 0 chr10 136449296 136449522 -3867243 + (CA)n Simple_repeat Simple_repeat 1 226 0 219 360 48 32 chr10 136449632 136449757 -3867008 - MIR SINE MIR -58 150 24 201 312 48 65 chr10 136450544 136450730 -3866035 - MIR SINE MIR -45 217 35 1815 155 24 14 chr10 136451139 136451435 -3865330 + AluJb SINE Alu 1 299 -13 387 0 0 0 chr10 136451439 136451482 -3865283 + (TA)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr10 136451481 136451512 -3865253 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 2201 192 63 50 chr10 136451526 136452110 -3864655 - L1MD2 LINE L1 -23 6336 5745 189 0 0 0 chr10 136453803 136453824 -3862941 + (CCCCCG)n Simple_repeat Simple_repeat 2 22 0 251 312 73 28 chr10 136456276 136456385 -3860380 + MIR SINE MIR 61 174 -88 330 262 169 17 chr10 136456748 136456985 -3859780 + L1ME LINE L1 5545 5817 -304 1342 211 66 79 chr10 136457354 136457824 -3858941 + MLT1C LTR MaLR 1 464 -3 1574 151 43 83 chr10 136458068 136458392 -3858373 - AluJb SINE Alu -1 311 1 3292 200 72 24 chr10 136458539 136459390 -3857375 - L1MC3 LINE L1 -15 7770 6879 186 286 0 0 chr10 136459799 136459848 -3856917 - MIR3 SINE MIR -40 168 120 874 232 80 57 chr10 136460127 136460463 -3856302 - MER2 DNA MER2_type 0 344 1 24 0 0 0 chr10 136460682 136460706 -3856059 + AT_rich Low_complexity Low_complexity 1 24 0 193 406 47 0 chr10 136460741 136460847 -3855918 - L2 LINE L2 -3 3310 3200 856 101 0 0 chr10 136460854 136460963 -3855802 + AluY SINE Alu 187 295 -16 1540 194 7 26 chr10 136461325 136461634 -3855131 - AluJo SINE Alu -9 303 1 408 385 174 11 chr10 136461648 136462004 -3854761 - L1MC4a LINE L1 -1874 5934 5521 24 0 0 0 chr10 136465158 136465182 -3851583 + AT_rich Low_complexity Low_complexity 1 24 0 227 335 0 32 chr10 136467712 136467867 -3848898 + (CATATA)n Simple_repeat Simple_repeat 6 155 0 195 42 0 0 chr10 136469543 136469567 -3847198 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 329 261 37 87 chr10 136469670 136469831 -3846934 - MIR SINE MIR -89 173 21 2188 122 54 25 chr10 136470026 136470380 -3846385 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 136470719 136470741 -3846024 + AT_rich Low_complexity Low_complexity 1 22 0 209 261 22 0 chr10 136473697 136473743 -3843022 + L2 LINE L2 3226 3272 0 197 245 57 19 chr10 136473750 136473803 -3842962 + MIR3 SINE MIR 122 176 -32 204 308 135 38 chr10 136477866 136477999 -3838766 + MIR SINE MIR 47 192 -70 201 154 0 0 chr10 136479975 136480014 -3836751 + T-rich Low_complexity Low_complexity 1 39 0 2203 103 0 13 chr10 136481108 136481419 -3835346 + AluSc SINE Alu 1 307 -2 1277 70 14 0 chr10 136481422 136481636 -3835129 + (GAAA)n Simple_repeat Simple_repeat 1 217 0 181 301 14 55 chr10 136481720 136481793 -3834972 - MER5B DNA MER1_type -97 81 12 246 264 33 44 chr10 136487934 136488024 -3828741 - MIR SINE MIR -62 146 102 2532 139 52 2 chr10 136489411 136489815 -3826950 + MSTB LTR MaLR 1 424 -2 248 318 39 31 chr10 136490303 136490432 -3826333 - MIR SINE MIR -113 149 20 209 349 112 20 chr10 136491382 136491448 -3825317 - MIR SINE MIR -35 227 168 1969 144 3 3 chr10 136491448 136491754 -3825011 - AluSc SINE Alu -3 306 1 209 349 112 20 chr10 136491754 136491839 -3824926 - MIR SINE MIR -94 168 62 381 242 72 13 chr10 136492628 136492781 -3823984 + MER103 DNA DNA 2 163 -3 2151 164 55 21 chr10 136492805 136493188 -3823577 - MSTD LTR MaLR 0 396 1 706 248 163 7 chr10 136493447 136493754 -3823011 + L1MC4 LINE L1 7688 8042 0 1929 151 0 3 chr10 136493900 136494212 -3822553 + AluSq SINE Alu 1 311 -2 539 232 49 73 chr10 136494504 136494668 -3822097 + L1MA9 LINE L1 6132 6291 0 1408 175 18 108 chr10 136494941 136495049 -3821716 + L1MA9 LINE L1 5918 6034 -278 1889 131 6 16 chr10 136495049 136495361 -3821404 + AluSc SINE Alu 1 309 0 1408 175 18 108 chr10 136495361 136495686 -3821079 + L1MA9 LINE L1 6034 6312 0 27 49 0 0 chr10 136495698 136495739 -3821026 + AT_rich Low_complexity Low_complexity 1 41 0 511 247 12 12 chr10 136499484 136499731 -3817034 + GA-rich Low_complexity Low_complexity 1 247 0 * 865 134 0 37 chr10 136499725 136499912 -3816853 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 209 271 21 143 chr10 136500211 136500351 -3816414 - MIR3 SINE MIR -17 191 69 232 244 0 0 chr10 136500550 136500595 -3816170 + MIR SINE MIR 108 152 -56 216 319 123 7 chr10 136501099 136501237 -3815528 - MIR SINE MIR -84 178 25 1931 140 63 33 chr10 136504548 136504912 -3811853 + THE1C LTR MaLR 1 375 0 361 256 98 15 chr10 136505537 136505670 -3811095 - L2 LINE L2 -3 3310 3167 189 74 0 0 chr10 136505683 136505710 -3811055 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1561 166 40 4 chr10 136505923 136506201 -3810564 + AluJb SINE Alu 1 288 -24 276 298 88 0 chr10 136506396 136506510 -3810255 + L2 LINE L2 3127 3250 -22 597 185 23 31 chr10 136507559 136507689 -3809076 + FLAM_C SINE Alu 1 129 -4 28 29 0 0 chr10 136508692 136508727 -3808038 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 136508997 136509019 -3807746 + AT_rich Low_complexity Low_complexity 1 22 0 2129 99 0 0 chr10 136510337 136510649 -3806116 + AluY SINE Alu 1 312 0 916 277 158 51 chr10 136511389 136511857 -3804908 + HAL1 LINE L1 968 1385 -1122 5768 108 9 6 chr10 136511857 136513512 -3803253 - L1PA15 LINE L1 -7 6158 4471 916 277 158 51 chr10 136513512 136513572 -3803193 + HAL1 LINE L1 1385 1437 -1070 1714 157 17 3 chr10 136513572 136513865 -3802900 - AluSx SINE Alu -4 308 12 916 277 158 51 chr10 136513865 136514215 -3802550 + HAL1 LINE L1 1437 1941 -566 334 268 52 21 chr10 136514469 136514566 -3802199 + HAL1b LINE L1 763 862 -486 240 305 51 41 chr10 136514692 136514889 -3801876 + HAL1 LINE L1 2226 2424 -83 203 175 0 0 chr10 136515052 136515092 -3801673 + T-rich Low_complexity Low_complexity 1 40 0 7620 32 2 10 chr10 136515114 136516793 -3799972 - L1PA4 LINE L1 -3 6152 4480 281 274 75 41 chr10 136517180 136517326 -3799439 - MLT1J2 LTR MaLR -287 163 13 204 40 0 0 chr10 136518980 136519005 -3797760 + (CA)n Simple_repeat Simple_repeat 2 26 0 7104 56 10 0 chr10 136519636 136520766 -3795999 + L1PA6 LINE L1 5082 6220 0 259 318 179 28 chr10 136520785 136520927 -3795838 + MIR SINE MIR 41 201 -53 223 205 17 25 chr10 136521032 136521281 -3795484 + (TG)n Simple_repeat Simple_repeat 1 246 0 256 258 11 11 chr10 136521293 136521386 -3795379 + (TG)n Simple_repeat Simple_repeat 2 94 0 440 198 12 12 chr10 136521399 136521566 -3795199 + (TG)n Simple_repeat Simple_repeat 2 168 0 360 0 0 0 chr10 136528692 136528732 -3788033 + (TG)n Simple_repeat Simple_repeat 2 41 0 225 191 0 0 chr10 136531275 136531322 -3785443 + A-rich Low_complexity Low_complexity 1 47 0 243 0 0 0 chr10 136532266 136532293 -3784472 + (TG)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr10 136532499 136532522 -3784243 + (T)n Simple_repeat Simple_repeat 1 23 0 297 75 0 0 chr10 136539453 136539493 -3777272 + (GA)n Simple_repeat Simple_repeat 2 41 0 22 56 0 0 chr10 136539987 136540023 -3776742 + AT_rich Low_complexity Low_complexity 1 36 0 31 26 0 0 chr10 136540204 136540242 -3776523 + AT_rich Low_complexity Low_complexity 1 38 0 182 344 56 16 chr10 136540750 136540875 -3775890 - MIR3 SINE MIR -1 207 78 240 238 0 0 chr10 136541821 136541884 -3774881 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1863 97 0 26 chr10 136542411 136542679 -3774086 - AluSg SINE Alu -8 302 42 563 120 0 0 chr10 136542679 136542754 -3774011 - AluS SINE Alu -233 77 3 309 279 140 15 chr10 136542787 136542923 -3773842 + MIR SINE MIR 96 248 -14 254 245 144 0 chr10 136542972 136543084 -3773681 + MIR SINE MIR 114 244 -18 188 258 225 11 chr10 136543093 136543182 -3773583 + L2 LINE L2 3204 3311 -2 288 0 0 0 chr10 136544788 136544820 -3771945 + (A)n Simple_repeat Simple_repeat 1 32 0 277 314 7 39 chr10 136545098 136545251 -3771514 + L2 LINE L2 2661 2808 -506 275 260 54 143 chr10 136545382 136545697 -3771068 + L2 LINE L2 2950 3236 -36 189 177 16 32 chr10 136545705 136545767 -3770998 + A-rich Low_complexity Low_complexity 5 65 0 221 175 10 41 chr10 136547123 136547220 -3769545 + CT-rich Low_complexity Low_complexity 2 95 0 279 274 0 0 chr10 136547735 136547797 -3768968 + CT-rich Low_complexity Low_complexity 4 65 0 296 188 14 0 chr10 136547797 136547866 -3768899 + (CA)n Simple_repeat Simple_repeat 1 70 0 180 0 0 0 chr10 136548487 136548507 -3768258 + (A)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr10 136552120 136552148 -3764617 + AT_rich Low_complexity Low_complexity 1 28 0 378 0 0 0 chr10 136553101 136553143 -3763622 + (CA)n Simple_repeat Simple_repeat 2 43 0 1517 204 57 32 chr10 136553979 136554358 -3762407 - L1MC2 LINE L1 -9 6335 5949 698 269 87 0 chr10 136554369 136554588 -3762177 - MIR SINE MIR -20 242 5 395 317 25 45 chr10 136554799 136555042 -3761723 - MIR SINE MIR -17 245 8 194 174 22 22 chr10 136555101 136555147 -3761618 + MIR SINE MIR 81 126 -82 3276 97 11 0 chr10 136556526 136556971 -3759794 + L1PA11 LINE L1 5723 6172 -2 468 295 19 26 chr10 136557740 136557824 -3758941 + MIR SINE MIR 107 191 -71 682 206 37 37 chr10 136557824 136557938 -3758827 - MER53 DNA DNA 0 189 73 2388 66 0 7 chr10 136557938 136558240 -3758525 - AluY SINE Alu -11 300 1 682 206 37 37 chr10 136558240 136558314 -3758451 - MER53 DNA DNA -115 74 1 468 295 19 26 chr10 136558314 136558385 -3758380 + MIR SINE MIR 191 261 -1 1052 236 143 22 chr10 136558951 136559375 -3757390 - MLT1D LTR MaLR -1 504 10 237 218 51 51 chr10 136560352 136560430 -3756335 + L2 LINE L2 3141 3218 -54 203 249 48 115 chr10 136560536 136560701 -3756064 - L2 LINE L2 -55 3258 3105 203 344 22 39 chr10 136561700 136561880 -3754885 + (CATG)n Simple_repeat Simple_repeat 3 179 0 299 315 18 9 chr10 136561900 136562011 -3754754 + (TG)n Simple_repeat Simple_repeat 2 113 0 2187 102 0 10 chr10 136566074 136566387 -3750378 - AluSx SINE Alu -1 311 2 360 0 0 0 chr10 136566434 136566474 -3750291 + (CA)n Simple_repeat Simple_repeat 2 41 0 180 0 0 0 chr10 136567422 136567442 -3749323 + (T)n Simple_repeat Simple_repeat 1 20 0 355 268 62 0 chr10 136570797 136570909 -3745856 + L2 LINE L2 3191 3309 -4 434 188 15 0 chr10 136570982 136571070 -3745695 + MIR SINE MIR 104 191 -50 2823 53 0 0 chr10 136571313 136571653 -3745112 + L1PA3 LINE L1 5813 6152 -3 215 91 91 0 chr10 136571670 136571714 -3745051 + A-rich Low_complexity Low_complexity 2 49 0 22 0 0 0 chr10 136572381 136572403 -3744362 + AT_rich Low_complexity Low_complexity 1 22 0 1439 191 161 78 chr10 136573307 136573809 -3742956 - MLT1E1 LTR MaLR -5 649 106 21 0 0 0 chr10 136574354 136574375 -3742390 + AT_rich Low_complexity Low_complexity 1 21 0 1297 109 62 0 chr10 136574974 136575167 -3741598 - LTR12 LTR ERV1 -133 581 377 291 245 31 20 chr10 136575168 136575266 -3741499 - LTR30 LTR ERV1 -80 642 544 6569 140 34 38 chr10 136575266 136576877 -3739888 - pTR5 LTR ERV1 -413 2025 743 2511 89 49 3 chr10 136577010 136577358 -3739407 + THE1B LTR MaLR 1 364 0 726 190 25 0 chr10 136578265 136578386 -3738379 + FLAM_C SINE Alu 2 125 -18 1869 146 0 7 chr10 136578582 136578876 -3737889 + AluSx SINE Alu 1 292 -20 1052 114 0 0 chr10 136578876 136579048 -3737717 + AluSg/x SINE Alu 134 305 0 355 288 62 77 chr10 136579104 136579378 -3737387 + L1ME4a LINE L1 5108 5377 -769 2181 68 0 27 chr10 136579595 136579891 -3736874 - AluY SINE Alu -14 297 10 267 280 120 5 chr10 136580287 136580487 -3736278 + L1ME4a LINE L1 5880 6102 -19 839 269 29 22 chr10 136580560 136580835 -3735930 + MER115 DNA AcHobo 412 688 -5 441 257 0 0 chr10 136581401 136581580 -3735185 + (TG)n Simple_repeat Simple_repeat 2 180 0 581 208 6 0 chr10 136581594 136581772 -3734993 + (TG)n Simple_repeat Simple_repeat 2 180 0 649 182 12 0 chr10 136581836 136582167 -3734598 + (TG)n Simple_repeat Simple_repeat 1 335 0 301 216 208 16 chr10 136582853 136582978 -3733787 + Charlie4 DNA MER1_type 1784 1932 -29 249 329 52 13 chr10 136584088 136584243 -3732522 + L1ME3A LINE L1 892 1052 -5879 347 269 67 62 chr10 136584786 136584994 -3731771 + L1ME3A LINE L1 1280 1488 -4935 915 281 179 35 chr10 136585033 136585703 -3731062 + L1ME3A LINE L1 1723 2465 -4476 1907 278 33 30 chr10 136585938 136586931 -3729834 + L1ME3A LINE L1 2857 3852 -3089 3355 197 20 15 chr10 136586949 136587720 -3729045 - Charlie1a DNA MER1_type -9 1446 672 375 304 10 0 chr10 136587720 136587822 -3728943 - MER81 DNA DNA 0 114 12 2025 256 70 36 chr10 136587833 136588475 -3728290 - Charlie1a DNA MER1_type -784 671 8 2864 282 60 27 chr10 136588602 136590100 -3726665 + L1ME3A LINE L1 3913 5460 -1481 480 227 9 27 chr10 136590202 136590312 -3726453 + Tigger3(Golem) DNA MER2_type 1 108 -2921 3930 137 63 14 chr10 136590313 136591022 -3725743 + Tigger3(Golem) DNA MER2_type 2285 3028 -1 219 231 39 0 chr10 136591022 136591074 -3725691 + (TATG)n Simple_repeat Simple_repeat 1 54 0 1257 269 12 2 chr10 136591113 136591533 -3725232 + L1ME3A LINE L1 5677 6100 -841 4267 209 69 2 chr10 136591551 136592621 -3724144 + L1MD1 LINE L1 5103 6240 -2 2168 265 42 19 chr10 136592653 136593348 -3723417 + L1ME3A LINE L1 6112 6822 -143 196 321 0 0 chr10 136593600 136593656 -3723109 + L3b LINE CR1 1191 1246 -337 184 232 54 18 chr10 136596654 136596710 -3720055 + L3 LINE CR1 1308 1365 -212 2179 87 0 20 chr10 136597613 136597913 -3718852 + AluSc SINE Alu 1 294 -15 303 49 0 0 chr10 136600068 136600109 -3716656 + (CA)n Simple_repeat Simple_repeat 1 41 0 230 231 15 0 chr10 136602411 136602476 -3714289 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 199 285 88 36 chr10 136602940 136603077 -3713688 + L2 LINE L2 2167 2310 -1004 180 284 34 23 chr10 136603237 136603325 -3713440 + L2 LINE L2 2297 2385 -929 393 226 43 0 chr10 136603352 136603445 -3713320 - MLT1E1 LTR MaLR -557 97 1 1149 181 47 23 chr10 136604122 136604337 -3712428 - MER58A DNA MER1_type 0 224 5 790 205 60 143 chr10 136604502 136604922 -3711843 + MLT1B LTR MaLR 6 390 0 393 252 241 53 chr10 136605373 136605809 -3710956 + MER113 DNA MER1_type? 3 520 -1 201 250 14 69 chr10 136605866 136605938 -3710827 + L2 LINE L2 3245 3312 -1 219 69 0 0 chr10 136606483 136606512 -3710253 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 349 48 0 chr10 136606909 136606972 -3709793 + MIR SINE MIR 30 95 -113 775 291 76 41 chr10 136607333 136607752 -3709013 - L2 LINE L2 -15 3298 2865 1440 247 27 37 chr10 136607773 136608182 -3708583 + MLT2D LTR ERVL 4 408 -6 2026 110 35 0 chr10 136609591 136609881 -3706884 - AluSx SINE Alu -12 300 1 2101 113 3 0 chr10 136611884 136612185 -3704580 + AluSp SINE Alu 2 303 -10 213 108 0 0 chr10 136614481 136614518 -3702247 + (TC)n Simple_repeat Simple_repeat 2 38 0 1262 237 68 12 chr10 136614526 136614864 -3701901 - MLT2C1 LTR ERVL -40 357 1 2029 102 0 10 chr10 136616120 136616415 -3700350 + AluSq SINE Alu 6 297 -16 252 322 44 0 chr10 136619478 136619568 -3697197 + MIR SINE MIR 71 164 -98 298 339 93 0 chr10 136619748 136619866 -3696899 + L3 LINE CR1 119 247 -1330 309 296 82 0 chr10 136620229 136620327 -3696438 - MIR SINE MIR -98 164 59 1981 157 67 0 chr10 136620330 136620673 -3696092 + MER47A DNA MER2_type 1 366 0 277 245 118 47 chr10 136620920 136621044 -3695721 - MIR SINE MIR -62 146 35 772 330 181 35 chr10 136621128 136621962 -3694803 + L3 LINE CR1 469 1424 -153 1350 224 57 45 chr10 136623522 136623616 -3693149 + MLT1C LTR MaLR 38 129 -338 1609 196 0 13 chr10 136623616 136623917 -3692848 + AluJo SINE Alu 1 297 -15 1350 224 57 45 chr10 136623917 136624247 -3692518 + MLT1C LTR MaLR 129 467 0 2193 125 0 3 chr10 136624749 136625062 -3691703 + AluSx SINE Alu 1 312 0 233 371 57 0 chr10 136625804 136625909 -3690856 - L2 LINE L2 0 3272 3162 1279 219 245 5 chr10 136627284 136627700 -3689065 - MLT1E LTR MaLR -8 585 70 279 266 133 6 chr10 136628376 136628534 -3688231 + L1ME LINE L1 5 182 -5937 309 375 17 40 chr10 136628710 136628886 -3687879 + L1ME LINE L1 571 742 -5377 201 39 0 0 chr10 136628962 136628988 -3687777 + (A)n Simple_repeat Simple_repeat 1 26 0 273 294 205 28 chr10 136629003 136629923 -3686842 + L1ME LINE L1 2838 3920 -2209 1562 277 83 23 chr10 136630061 136630832 -3685933 + L1ME LINE L1 4976 5781 -364 2304 115 0 0 chr10 136630863 136631167 -3685598 + AluSx SINE Alu 1 304 -8 1010 280 89 44 chr10 136631229 136631769 -3684996 + L1ME3 LINE L1 5336 5899 -263 332 297 40 7 chr10 136631801 136631949 -3684816 - LTR16A1 LTR ERVL -300 157 5 3371 162 48 7 chr10 136632130 136632736 -3684029 - L1MB3 LINE L1 -2 6181 5551 379 297 68 0 chr10 136633464 136633582 -3683183 - MIR SINE MIR -31 231 106 977 283 45 43 chr10 136633957 136634424 -3682341 - HAL1 LINE L1 -794 1713 1246 1069 143 12 0 chr10 136634783 136634951 -3681814 + FRAM SINE Alu 1 168 -8 1516 227 117 11 chr10 136636687 136637141 -3679624 - MLT1D LTR MaLR -3 502 1 276 30 0 0 chr10 136639369 136639402 -3677363 + (GA)n Simple_repeat Simple_repeat 2 34 0 528 231 0 0 chr10 136643926 136644082 -3672683 + (TG)n Simple_repeat Simple_repeat 1 156 0 186 43 0 0 chr10 136644286 136644309 -3672456 + (CA)n Simple_repeat Simple_repeat 2 24 0 220 302 0 0 chr10 136647859 136647912 -3668853 + GA-rich Low_complexity Low_complexity 1 53 0 234 0 0 0 chr10 136648346 136648372 -3668393 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1719 142 16 32 chr10 136648381 136648691 -3668074 + AluJo SINE Alu 6 310 -2 2196 114 0 0 chr10 136651958 136652247 -3664518 + AluSq SINE Alu 1 289 -24 186 43 0 0 chr10 136652257 136652280 -3664485 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 2530 50 0 0 chr10 136653278 136653580 -3663185 - AluY SINE Alu -9 302 1 3152 142 37 28 chr10 136655266 136655835 -3660930 + MER4B LTR ERV1 1 574 -36 889 232 53 82 chr10 136655989 136656412 -3660353 + MLT1A2 LTR MaLR 1 396 0 443 219 8 98 chr10 136657409 136657532 -3659233 + MER81 DNA DNA 1 112 -2 248 323 101 32 chr10 136657545 136657703 -3659062 + MER5A DNA MER1_type 2 170 -19 250 262 106 51 chr10 136658206 136658366 -3658399 - MIR3 SINE MIR -65 143 15 522 280 71 24 chr10 136658521 136658732 -3658033 + MIR SINE MIR 40 260 -2 413 336 0 9 chr10 136659126 136659233 -3657532 - L2 LINE L2 -33 3239 3134 9822 161 45 10 chr10 136660215 136661881 -3654884 + ERVL-B1 LTR ERVL 4026 5750 -14 1942 218 28 71 chr10 136661889 136662388 -3654377 + MLT2B1 LTR ERVL 3 479 -41 261 0 0 0 chr10 136662388 136662417 -3654348 + (CA)n Simple_repeat Simple_repeat 2 30 0 1942 218 28 71 chr10 136662417 136662455 -3654310 + MLT2B1 LTR ERVL 479 517 -3 307 243 162 27 chr10 136662476 136662587 -3654178 + L2 LINE L2 3187 3312 -1 586 310 139 34 chr10 136663871 136664517 -3652248 + HAL1b LINE L1 66 779 -569 44 70 0 0 chr10 136664749 136664835 -3651930 + AT_rich Low_complexity Low_complexity 1 86 0 299 163 43 39 chr10 136664863 136665190 -3651575 + (TTATA)n Simple_repeat Simple_repeat 1 328 0 27 29 0 0 chr10 136665378 136665412 -3651353 + AT_rich Low_complexity Low_complexity 1 34 0 366 284 136 25 chr10 136665665 136665827 -3650938 - MIR SINE MIR -65 197 18 2239 123 0 3 chr10 136666352 136666662 -3650103 + AluSx SINE Alu 1 309 -3 522 180 0 0 chr10 136670585 136670685 -3646080 + GA-rich Low_complexity Low_complexity 2 101 0 191 224 0 41 chr10 136674007 136674056 -3642709 - L2 LINE L2 -19 3253 3207 461 304 107 0 chr10 136674790 136675043 -3641722 - L1ME4a LINE L1 -66 6055 5776 309 275 18 0 chr10 136675052 136675161 -3641604 - L1ME4a LINE L1 -383 5738 5628 27 29 0 0 chr10 136675258 136675292 -3641473 + AT_rich Low_complexity Low_complexity 1 34 0 324 229 98 23 chr10 136675315 136675465 -3641300 - L1ME4a LINE L1 -753 5431 5270 234 0 0 0 chr10 136675671 136675697 -3641068 + (CA)n Simple_repeat Simple_repeat 2 27 0 340 276 87 27 chr10 136675718 136675903 -3640862 - L1MC4a LINE L1 -1914 5894 5699 719 296 83 45 chr10 136676329 136677102 -3639663 - L1MC4a LINE L1 -1175 4971 4170 289 333 0 12 chr10 136677477 136677570 -3639195 + MIR SINE MIR 28 120 -88 397 310 107 61 chr10 136678086 136678612 -3638153 - L1MC4a LINE L1 -2921 3225 2676 24 32 0 0 chr10 136678626 136678657 -3638108 + AT_rich Low_complexity Low_complexity 1 31 0 232 259 17 0 chr10 136679287 136679345 -3637420 + CT-rich Low_complexity Low_complexity 1 59 0 186 196 93 113 chr10 136680241 136680252 -3636513 + L2 LINE L2 3219 3229 -84 1146 220 24 102 chr10 136680252 136680675 -3636090 - MLT1B LTR MaLR 0 390 1 186 196 93 113 chr10 136680675 136680760 -3636005 + L2 LINE L2 3229 3313 0 1993 180 85 21 chr10 136683217 136683651 -3633114 - MLT1C LTR MaLR 0 467 6 278 273 144 15 chr10 136685308 136685440 -3631325 - MER103 DNA DNA -12 154 6 185 360 41 20 chr10 136685770 136685917 -3630848 - L3 LINE CR1 -341 1236 1087 410 314 97 76 chr10 136686074 136686881 -3629884 + L2 LINE L2 2150 2973 -341 2748 45 0 0 chr10 136687049 136687360 -3629405 - AluY SINE Alu 0 311 1 1545 210 32 96 chr10 136687463 136687962 -3628803 - MLT1C LTR MaLR 0 467 1 428 238 95 27 chr10 136688615 136688762 -3628003 - MIR3 SINE MIR -41 167 11 188 327 95 24 chr10 136688858 136689026 -3627739 - MIR SINE MIR -28 234 55 318 286 42 60 chr10 136690509 136690677 -3626088 + MIR SINE MIR 65 229 -33 221 208 0 21 chr10 136691028 136691076 -3625689 + L2 LINE L2 3225 3271 -1 297 312 93 77 chr10 136691178 136691566 -3625199 - L2 LINE L2 -1 3271 2878 2688 119 8 6 chr10 136691744 136692104 -3624661 - THE1B LTR MaLR 0 364 4 297 321 87 79 chr10 136692134 136692641 -3624124 - L2 LINE L2 -820 2494 1984 3032 286 57 30 chr10 136692741 136693697 -3623068 + L1M4 LINE L1 2110 3123 -3023 1612 197 3 16 chr10 136693697 136694012 -3622753 + AluJo SINE Alu 2 312 0 3032 286 57 30 chr10 136694012 136694552 -3622213 + L1M4 LINE L1 3123 3647 -2499 316 233 45 23 chr10 136694609 136694742 -3622023 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 369 174 11 33 chr10 136694969 136695061 -3621704 - L1MB8 LINE L1 0 6178 6089 297 0 0 0 chr10 136696118 136696151 -3620614 + (CCCCAG)n Simple_repeat Simple_repeat 2 34 0 258 294 22 0 chr10 136698484 136698576 -3618189 + MER94 DNA DNA 6 99 -35 300 120 0 0 chr10 136698896 136698946 -3617819 + (TC)n Simple_repeat Simple_repeat 2 51 0 1826 133 93 34 chr10 136699185 136699539 -3617226 - THE1C LTR MaLR 0 375 1 193 293 57 81 chr10 136699571 136699694 -3617071 - L2 LINE L2 0 3272 3153 752 309 86 8 chr10 136700105 136700490 -3616275 + L2 LINE L2 2269 2683 -631 205 256 39 13 chr10 136700513 136700591 -3616174 + L2 LINE L2 2793 2872 -442 323 293 0 0 chr10 136700671 136700753 -3616012 + L2 LINE L2 3225 3306 -7 306 0 0 0 chr10 136700756 136700790 -3615975 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 331 319 101 0 chr10 136704697 136704835 -3611930 + MIR SINE MIR 48 199 -63 2218 156 48 29 chr10 136704840 136705372 -3611393 - MLT2A2 LTR ERVL 0 554 1 13889 124 9 20 chr10 136705373 136705571 -3611194 - Tigger1 DNA MER2_type 0 2418 2219 1671 185 3 30 chr10 136705571 136705874 -3610891 + AluJo SINE Alu 1 295 -17 13889 124 9 20 chr10 136705874 136707829 -3608936 - Tigger1 DNA MER2_type -199 2219 289 1993 101 79 39 chr10 136707841 136708197 -3608568 + THE1C LTR MaLR 6 375 0 1512 167 17 40 chr10 136708197 136708495 -3608270 - Tigger1 DNA MER2_type -2127 291 1 195 129 0 0 chr10 136708555 136708586 -3608179 + (CTA)n Simple_repeat Simple_repeat 3 33 0 385 315 47 53 chr10 136709123 136709463 -3607302 + L1ME3A LINE L1 5613 5950 -220 259 258 0 0 chr10 136710052 136710118 -3606647 + MLT1J2 LTR MaLR 372 437 -13 3309 218 71 26 chr10 136712751 136713810 -3602955 + L1MC4 LINE L1 6678 7711 -97 183 225 0 45 chr10 136713810 136713921 -3602844 + (TATG)n Simple_repeat Simple_repeat 1 106 0 579 201 162 17 chr10 136714029 136714208 -3602557 - L1MC4 LINE L1 -790 7252 7048 1139 177 13 44 chr10 136714381 136714607 -3602158 + MER20 DNA MER1_type 1 219 0 254 195 232 0 chr10 136714741 136714823 -3601942 - AluJ/FLAM SINE Alu -200 102 2 1998 150 3 16 chr10 136717287 136717593 -3599172 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr10 136718688 136718710 -3598055 + AT_rich Low_complexity Low_complexity 1 22 0 2076 122 7 0 chr10 136718713 136719007 -3597758 + AluSx SINE Alu 9 304 -8 416 314 107 29 chr10 136719320 136719791 -3596974 + L1ME LINE L1 5292 5814 -307 764 291 146 62 chr10 136720275 136721193 -3595572 + L1ME4a LINE L1 3791 4785 -1361 1690 61 0 19 chr10 136721468 136721682 -3595083 + L1PA7 LINE L1 5942 6151 -3 189 0 0 0 chr10 136721862 136721883 -3594882 + (CA)n Simple_repeat Simple_repeat 2 22 0 1270 285 51 34 chr10 136722062 136722707 -3594058 + L1ME4a LINE L1 5265 5920 -201 412 265 29 8 chr10 136723133 136723288 -3593477 - MIR SINE MIR -68 140 2 1223 234 112 17 chr10 136723327 136723622 -3593143 + MLT1I LTR MaLR 82 404 -5 215 360 63 0 chr10 136723836 136723947 -3592818 + MIR SINE MIR 109 226 -36 863 179 6 0 chr10 136728041 136728220 -3588545 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 814 179 6 11 chr10 136728260 136728439 -3588326 + (TGAG)n Simple_repeat Simple_repeat 1 178 0 631 231 7 0 chr10 136728450 136728728 -3588037 + (TGGG)n Simple_repeat Simple_repeat 1 280 0 681 217 0 0 chr10 136728748 136728928 -3587837 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 374 262 7 0 chr10 136728951 136729100 -3587665 + (TGGG)n Simple_repeat Simple_repeat 4 153 0 221 378 0 0 chr10 136730990 136731088 -3585677 + (TG)n Simple_repeat Simple_repeat 2 99 0 260 364 6 12 chr10 136731102 136731264 -3585501 + (TG)n Simple_repeat Simple_repeat 1 161 0 * 351 322 0 33 chr10 136731242 136731422 -3585343 + (TATG)n Simple_repeat Simple_repeat 1 174 0 * 405 361 6 0 chr10 136731321 136731490 -3585275 + (TG)n Simple_repeat Simple_repeat 2 171 0 331 375 11 0 chr10 136731514 136731690 -3585075 + (TG)n Simple_repeat Simple_repeat 2 179 0 208 363 12 23 chr10 136731627 136731798 -3584967 + (TATG)n Simple_repeat Simple_repeat 2 170 0 * 278 127 0 48 chr10 136731810 136731873 -3584892 + (TG)n Simple_repeat Simple_repeat 2 61 0 266 310 0 20 chr10 136731875 136731975 -3584790 + (CATG)n Simple_repeat Simple_repeat 2 99 0 219 114 0 0 chr10 136731987 136732022 -3584743 + (TG)n Simple_repeat Simple_repeat 1 35 0 663 293 172 26 chr10 136732638 136733062 -3583703 + MLT1K LTR MaLR 99 584 -4 248 291 0 12 chr10 136734479 136734565 -3582200 - L3b LINE CR1 -338 1245 1161 193 351 35 26 chr10 136738743 136738857 -3577908 + L3 LINE CR1 343 457 -1120 * 220 360 34 0 chr10 136738839 136738928 -3577837 + L3b LINE CR1 1369 1460 -123 212 0 36 0 chr10 136741618 136741646 -3575119 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 383 259 37 0 chr10 136742345 136742453 -3574312 + MER81 DNA DNA 1 112 -2 28 86 0 0 chr10 136743469 136743539 -3573226 + AT_rich Low_complexity Low_complexity 1 70 0 2139 99 38 7 chr10 136743577 136743870 -3572895 + AluSq SINE Alu 1 302 -11 1813 164 3 11 chr10 136744873 136745159 -3571606 - AluJo SINE Alu -26 286 3 375 238 0 0 chr10 136749496 136749580 -3567185 + MER89 LTR ERV1 4 87 -472 * 911 271 73 21 chr10 136749559 136749899 -3566866 + MER89 LTR ERV1 201 558 -1 2495 216 155 14 chr10 136749927 136750814 -3565951 + L1MC4 LINE L1 5186 5378 -768 26 0 0 0 chr10 136751260 136751286 -3565479 + AT_rich Low_complexity Low_complexity 1 26 0 644 237 5 52 chr10 136751417 136751611 -3565154 - MER5A DNA MER1_type -3 186 2 750 211 0 0 chr10 136752794 136752974 -3563791 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 271 259 38 61 chr10 136753013 136753144 -3563621 + MIR SINE MIR 56 183 -79 617 286 33 14 chr10 136753324 136753537 -3563228 - MIR SINE MIR -8 254 38 238 145 226 0 chr10 136753602 136753664 -3563101 - MLT1D LTR MaLR -176 329 254 256 281 24 0 chr10 136754625 136754707 -3562058 - MLT1D LTR MaLR -309 196 113 279 231 75 45 chr10 136754759 136754893 -3561872 + MIR SINE MIR 100 237 -25 386 309 20 9 chr10 136754994 136755349 -3561416 + (TG)n Simple_repeat Simple_repeat 1 359 0 1433 217 101 46 chr10 136755884 136756298 -3560467 - MLT1D LTR MaLR -2 503 60 188 67 33 0 chr10 136756298 136756328 -3560437 + (TAATG)n Simple_repeat Simple_repeat 3 33 0 1433 217 101 46 chr10 136756328 136756370 -3560395 - MLT1D LTR MaLR -445 60 22 310 246 131 25 chr10 136757231 136757353 -3559412 + MIR SINE MIR 122 256 -6 2753 91 6 3 chr10 136758106 136758469 -3558296 - THE1B LTR MaLR 0 364 1 234 170 21 64 chr10 136758782 136758876 -3557889 + A-rich Low_complexity Low_complexity 3 92 0 244 249 116 50 chr10 136759106 136759287 -3557478 - L2 LINE L2 -43 3270 3078 22 35 0 0 chr10 136759425 136759454 -3557311 + AT_rich Low_complexity Low_complexity 1 29 0 428 295 98 25 chr10 136759765 136760243 -3556522 + HAL1b LINE L1 468 2372 -135 246 136 0 0 chr10 136760295 136760339 -3556426 + (TC)n Simple_repeat Simple_repeat 2 45 0 252 205 64 26 chr10 136760559 136760637 -3556128 + L1ME3A LINE L1 2205 2285 -3861 208 291 108 44 chr10 136760747 136760950 -3555815 + L2 LINE L2 3098 3313 0 347 338 81 0 chr10 136761572 136761770 -3554995 + L1ME3A LINE L1 2923 3136 -3010 1671 164 26 22 chr10 136762781 136763092 -3553673 + AluJo SINE Alu 1 312 0 345 288 18 27 chr10 136763438 136763549 -3553216 + L1ME LINE L1 5567 5676 -2132 192 40 0 0 chr10 136763562 136763587 -3553178 + (CA)n Simple_repeat Simple_repeat 1 25 0 281 335 124 0 chr10 136763662 136763823 -3552942 - MIR SINE MIR -74 188 8 232 205 205 0 chr10 136763839 136763922 -3552843 + L1ME LINE L1 5710 5809 -312 373 301 13 7 chr10 136767316 136767469 -3549296 + L1MC4 LINE L1 4507 4660 -1486 202 359 24 24 chr10 136768027 136768194 -3548571 - L2 LINE L2 -1971 1343 1177 296 47 0 23 chr10 136768533 136768576 -3548189 + (CA)n Simple_repeat Simple_repeat 2 43 0 1848 164 19 19 chr10 136768683 136768993 -3547772 + AluJb SINE Alu 1 310 -2 29 0 0 0 chr10 136770233 136770262 -3546503 + AT_rich Low_complexity Low_complexity 1 29 0 303 283 123 71 chr10 136770300 136770852 -3545913 + HAL1 LINE L1 1095 1675 -832 873 142 71 65 chr10 136770864 136771033 -3545732 + AluJo SINE Alu 1 170 -142 3320 233 76 45 chr10 136771134 136772338 -3544427 + L1MC4 LINE L1 5371 6612 -1430 327 290 11 17 chr10 136772460 136772636 -3544129 + (TGGG)n Simple_repeat Simple_repeat 1 175 0 368 316 17 6 chr10 136772678 136772852 -3543913 + (TG)n Simple_repeat Simple_repeat 2 177 0 1344 224 79 50 chr10 136773392 136773812 -3542953 - MLT1D LTR MaLR -7 498 67 346 285 15 23 chr10 136773979 136774109 -3542656 + (TG)n Simple_repeat Simple_repeat 1 129 0 948 292 54 30 chr10 136774169 136774707 -3542058 + L1ME3A LINE L1 3297 3847 -2299 421 297 24 38 chr10 136774911 136775120 -3541645 + L1MC4 LINE L1 6459 6664 -1378 670 224 0 0 chr10 136775126 136775269 -3541496 + L1ME3A LINE L1 4487 4629 -1517 * 738 233 217 4 chr10 136775259 136775512 -3541253 - L1M4 LINE L1 -1208 4938 4632 367 272 165 6 chr10 136775532 136775690 -3541075 + L1ME3A LINE L1 5158 5340 -806 1292 134 0 67 chr10 136775692 136775930 -3540835 - AluJb SINE Alu -6 306 85 31 58 0 0 chr10 136776054 136776106 -3540659 + AT_rich Low_complexity Low_complexity 1 52 0 408 335 61 17 chr10 136776455 136777082 -3539683 + L1ME1 LINE L1 2480 3146 -3000 395 293 39 39 chr10 136777360 136777616 -3539149 + L1ME3A LINE L1 5568 5823 -339 300 220 101 83 chr10 136777711 136777879 -3538886 + L1ME3A LINE L1 5965 6135 -35 387 297 86 64 chr10 136777907 136778267 -3538498 + L1ME1 LINE L1 3115 3482 -2664 433 266 117 47 chr10 136778445 136778701 -3538064 - L1M4 LINE L1 -3060 3086 2813 389 293 65 43 chr10 136779536 136779738 -3537027 - L1ME LINE L1 -526 5595 5412 362 275 69 44 chr10 136779747 136779907 -3536858 + MIR SINE MIR 17 180 -82 4074 232 58 38 chr10 136779909 136780273 -3536492 + L1ME1 LINE L1 3736 4091 -2075 1609 99 36 0 chr10 136780273 136780494 -3536271 - MER30 DNA MER1_type 0 230 2 4074 232 58 38 chr10 136780494 136781352 -3535413 + L1ME1 LINE L1 4091 4930 -1236 1706 65 0 0 chr10 136781352 136781572 -3535193 + AluY SINE Alu 84 303 0 4074 232 58 38 chr10 136781572 136782270 -3534495 + L1ME1 LINE L1 4930 5714 -452 2391 169 52 2 chr10 136782270 136782709 -3534056 - LOR1b LTR ERV1 0 461 1 4074 232 58 38 chr10 136782709 136783170 -3533595 + L1ME1 LINE L1 5714 6164 -2 247 306 0 0 chr10 136783170 136783232 -3533533 + MIR SINE MIR 201 262 0 1660 233 60 81 chr10 136783521 136784238 -3532527 - L1ME1 LINE L1 -5 6161 5460 488 311 60 63 chr10 136785806 136786269 -3530496 - L1M4 LINE L1 -3556 2590 2129 420 194 176 35 chr10 136786517 136786687 -3530078 + MER105 DNA DNA 9 202 -2 498 254 92 42 chr10 136787332 136787572 -3529193 - L1ME1 LINE L1 -1585 4561 4310 21 36 0 0 chr10 136787702 136787730 -3529035 + AT_rich Low_complexity Low_complexity 1 28 0 2425 40 44 3 chr10 136788465 136788761 -3528004 + AluY SINE Alu 1 308 -3 194 265 72 48 chr10 136789036 136789119 -3527646 - L2 LINE L2 0 3313 3229 674 232 6 17 chr10 136789121 136789298 -3527467 + L1MB7 LINE L1 5996 6170 -14 2097 92 65 10 chr10 136791479 136791772 -3524993 + AluSx SINE Alu 4 312 0 411 287 9 0 chr10 136793071 136793186 -3523579 - MER94 DNA DNA -14 120 5 188 348 54 100 chr10 136793656 136794027 -3522738 - L2 LINE L2 0 3272 2919 2249 114 0 0 chr10 136796372 136796679 -3520086 - AluSx SINE Alu -1 311 5 225 360 7 50 chr10 136797926 136798065 -3518700 + L2 LINE L2 3138 3270 -2 308 317 37 12 chr10 136799143 136799307 -3517458 + L2 LINE L2 1290 1457 -1857 341 267 55 59 chr10 136799343 136799545 -3517220 + L1ME2 LINE L1 2198 2398 -3998 1231 276 129 16 chr10 136799703 136800655 -3516110 + L1ME2 LINE L1 2415 3474 -2741 1492 290 34 16 chr10 136800703 136801386 -3515379 + L1ME2 LINE L1 3722 4416 -1799 2305 244 61 50 chr10 136801391 136802232 -3514533 + L1ME1 LINE L1 5311 6160 -6 1350 251 23 41 chr10 136802243 136802459 -3514306 + L1ME2 LINE L1 4388 4606 -1609 3430 141 8 4 chr10 136802459 136802984 -3513781 - MER1A DNA MER1_type 0 527 1 1350 251 23 41 chr10 136802984 136803333 -3513432 + L1ME2 LINE L1 4606 4943 -1272 1757 250 72 42 chr10 136803392 136804529 -3512236 + L1ME2 LINE L1 5029 6211 -22 335 338 22 7 chr10 136804572 136804711 -3512054 + L1MC5 LINE L1 7784 7924 -37 331 262 119 24 chr10 136805042 136805168 -3511597 + MIR SINE MIR 50 187 -75 262 259 17 17 chr10 136807588 136807704 -3509061 + (TA)n Simple_repeat Simple_repeat 1 116 0 290 342 40 13 chr10 136808223 136808372 -3508393 + L3 LINE CR1 1249 1401 -176 611 299 108 5 chr10 136808433 136808637 -3508128 - MIR SINE MIR -30 232 8 3088 136 18 18 chr10 136808978 136809530 -3507235 - L1MA8 LINE L1 -2 6289 5738 597 126 11 0 chr10 136809539 136809634 -3507131 - L1PA16 LINE L1 0 6166 6071 461 183 0 29 chr10 136809643 136809747 -3507018 + L1PA16 LINE L1 5963 6063 -103 4433 169 27 16 chr10 136809963 136810828 -3505937 + L1MA9 LINE L1 5439 6312 0 340 295 131 0 chr10 136811149 136811271 -3505494 - MIR SINE MIR -2 260 123 504 0 0 0 chr10 136811444 136811500 -3505265 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 2185 110 27 0 chr10 136812917 136813217 -3503548 + AluSx SINE Alu 3 310 -2 1223 136 128 4 chr10 136815209 136815451 -3501314 - Tigger2a DNA MER2_type 0 444 173 845 150 6 60 chr10 136815560 136815727 -3501038 - Tigger2a DNA MER2_type -276 158 1 478 226 5 62 chr10 136816094 136816289 -3500476 + L1M4 LINE L1 2718 2901 -3245 1361 192 10 36 chr10 136816390 136816697 -3500068 + L1MD3 LINE L1 6729 7027 -968 1427 254 78 75 chr10 136816725 136816934 -3499831 + L1M4 LINE L1 4083 4290 -1856 234 172 207 0 chr10 136816934 136816992 -3499773 - MER116 DNA Mariner -7 73 4 1427 254 78 75 chr10 136816992 136817772 -3498993 + L1M4 LINE L1 4290 5133 -1013 210 150 30 60 chr10 136817792 136817892 -3498873 + (TA)n Simple_repeat Simple_repeat 1 97 0 2379 215 105 28 chr10 136817897 136818795 -3497970 + L1ME4a LINE L1 4326 5292 -854 309 318 81 62 chr10 136818827 136819148 -3497617 + HAL1b LINE L1 548 874 -474 532 315 62 0 chr10 136819172 136819432 -3497333 + L1ME4a LINE L1 5570 5845 -276 432 0 0 0 chr10 136819943 136819991 -3496774 + (CA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 136822221 136822245 -3494520 + AT_rich Low_complexity Low_complexity 1 24 0 2017 147 92 11 chr10 136826593 136826614 -3490151 - Tigger2 DNA MER2_type 0 2718 2700 2158 132 114 5 chr10 136826614 136827000 -3489765 - MSTA LTR MaLR 0 428 1 2017 147 92 11 chr10 136827000 136827425 -3489340 - Tigger2 DNA MER2_type -18 2700 1 889 202 181 0 chr10 136828157 136828345 -3488420 + MER58A DNA MER1_type 3 224 0 272 375 54 11 chr10 136828704 136828888 -3487877 + L3 LINE CR1 437 628 -949 1640 138 50 10 chr10 136832487 136832785 -3483980 - AluJo SINE Alu -1 311 2 405 236 121 14 chr10 136834327 136834467 -3482298 - MLT1L LTR MaLR -8 607 453 2086 103 7 0 chr10 136836535 136836827 -3479938 + AluSx SINE Alu 6 299 -13 218 196 0 22 chr10 136838322 136838368 -3478397 + GA-rich Low_complexity Low_complexity 3 47 0 21 0 0 0 chr10 136839804 136839825 -3476940 + AT_rich Low_complexity Low_complexity 1 21 0 2202 110 3 0 chr10 136841785 136842094 -3474671 - AluSg SINE Alu 0 310 1 377 283 69 44 chr10 136842424 136842583 -3474182 - MIR SINE MIR -28 234 72 737 185 22 51 chr10 136842748 136842926 -3473839 - MER53 DNA DNA 0 189 17 1886 154 33 4 chr10 136847444 136847794 -3468971 - MLT1B LTR MaLR -7 389 28 250 270 86 49 chr10 136848005 136848210 -3468555 - MIR SINE MIR -41 221 3 1156 135 67 0 chr10 136848929 136849137 -3467628 + AluJo SINE Alu 84 305 -7 1031 104 5 14 chr10 136849142 136849353 -3467412 + (GGAA)n Simple_repeat Simple_repeat 1 209 0 289 287 11 0 chr10 136850437 136850531 -3466234 + L1ME LINE L1 5719 5813 -308 800 91 0 58 chr10 136850656 136850777 -3465988 - AluSg/x SINE Alu -12 300 187 260 313 150 6 chr10 136853119 136853279 -3463486 + MIR SINE MIR 69 251 -11 315 372 26 11 chr10 136853382 136853573 -3463192 + L1MC/D LINE L1 5629 5822 -1986 831 218 74 39 chr10 136853713 136853942 -3462823 - MER8 DNA MER2_type -2 237 1 189 107 0 0 chr10 136854129 136854157 -3462608 + (GGAGA)n Simple_repeat Simple_repeat 3 30 0 2811 149 25 2 chr10 136857014 136857485 -3459280 - Tigger4(Zombi) DNA MER2_type -28 2703 2222 671 248 52 0 chr10 136857482 136857635 -3459130 - Tigger4(Zombi) DNA MER2_type -2570 161 1 * 1990 97 55 0 chr10 136857862 136858152 -3458613 - L1PB2 LINE L1 0 6151 5846 1069 210 227 22 chr10 136858171 136858585 -3458180 + MLT1D LTR MaLR 1 499 -6 2224 109 0 0 chr10 136859103 136859415 -3457350 + AluSx SINE Alu 1 312 0 259 301 176 20 chr10 136859454 136859607 -3457158 - MER5A DNA MER1_type 0 189 13 273 29 0 0 chr10 136859750 136859784 -3456981 + (CA)n Simple_repeat Simple_repeat 1 34 0 679 312 64 66 chr10 136860555 136861182 -3455583 + L1ME3 LINE L1 995 1715 -1072 1771 171 0 7 chr10 136861185 136861495 -3455270 + AluSx SINE Alu 1 308 -4 547 272 37 33 chr10 136861522 136861765 -3455000 + HAL1 LINE L1 1425 1668 -839 428 245 73 105 chr10 136862064 136862350 -3454415 + L1ME3 LINE L1 2186 2462 -3964 2065 133 0 7 chr10 136862375 136862675 -3454090 - AluSx SINE Alu -14 298 1 303 306 54 24 chr10 136862694 136862991 -3453774 + L1ME3 LINE L1 2491 2796 -3630 1461 195 7 7 chr10 136863007 136863294 -3453471 + AluJo SINE Alu 2 288 -24 277 341 90 0 chr10 136863327 136863550 -3453215 + L1ME3 LINE L1 4233 4475 -1951 2031 158 145 20 chr10 136863632 136864081 -3452684 + MLT1D LTR MaLR 1 505 0 642 297 27 27 chr10 136864201 136864605 -3452160 + L1ME3 LINE L1 4722 5125 -1301 545 283 55 74 chr10 136864926 136865957 -3450808 + L1ME3 LINE L1 5152 6164 -278 982 176 30 0 chr10 136865981 136866146 -3450619 + FAM SINE Alu 4 173 -2 428 225 49 21 chr10 136868598 136868740 -3448025 - MER53 DNA DNA -5 184 39 1222 241 59 12 chr10 136869447 136869767 -3446998 + MER58B DNA MER1_type 2 336 -5 570 308 148 23 chr10 136870129 136870688 -3446077 + L2 LINE L2 1573 2201 -1113 717 128 0 85 chr10 136870728 136870869 -3445896 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr10 136870869 136870890 -3445875 + AT_rich Low_complexity Low_complexity 1 21 0 511 339 18 27 chr10 136871301 136871525 -3445240 + MIR SINE MIR 34 255 -7 31 26 0 0 chr10 136873108 136873146 -3443619 + AT_rich Low_complexity Low_complexity 1 38 0 217 162 29 29 chr10 136875816 136875884 -3440881 + (CATG)n Simple_repeat Simple_repeat 1 68 0 288 311 0 0 chr10 136875888 136875969 -3440796 + (CA)n Simple_repeat Simple_repeat 1 81 0 895 291 55 39 chr10 136876981 136877568 -3439197 + L1ME4a LINE L1 5267 5862 -259 22 88 0 0 chr10 136877758 136877815 -3438950 + AT_rich Low_complexity Low_complexity 1 57 0 198 330 88 0 chr10 136879740 136879831 -3436934 + MIR SINE MIR 56 154 -108 1986 235 76 4 chr10 136879842 136880366 -3436399 + L1MC2 LINE L1 5768 6329 -15 292 204 148 68 chr10 136882363 136882525 -3434240 - MER53 DNA DNA -5 184 10 396 129 57 0 chr10 136882981 136883051 -3433714 - MER46C DNA MER2_type -8 330 257 334 303 26 19 chr10 136883260 136883415 -3433350 - MER46C DNA MER2_type -144 194 39 953 217 0 37 chr10 136884281 136884498 -3432267 - MER3 DNA MER1_type 0 209 1 323 338 153 28 chr10 136884764 136885614 -3431151 + L2 LINE L2 1849 2804 -510 895 238 14 9 chr10 136885637 136885860 -3430905 - MER58A DNA MER1_type 0 224 1 342 67 0 0 chr10 136886152 136886197 -3430568 + (CA)n Simple_repeat Simple_repeat 1 45 0 1625 149 29 44 chr10 136886618 136886934 -3429831 - AluJb SINE Alu -1 311 1 1406 206 0 90 chr10 136887485 136887884 -3428881 + MLT1A1 LTR MaLR 1 363 -2 23 0 0 0 chr10 136887913 136887936 -3428829 + AT_rich Low_complexity Low_complexity 1 23 0 194 274 0 68 chr10 136888048 136888121 -3428644 + MER5B DNA MER1_type 110 177 -1 265 271 37 19 chr10 136888128 136888235 -3428530 + L1ME4a LINE L1 5794 5902 -219 1956 153 118 55 chr10 136888364 136888815 -3427950 - Charlie1b DNA MER1_type -44 479 1 575 113 0 0 chr10 136889728 136889808 -3426957 - MADE1 DNA Mariner 0 80 1 1616 237 52 13 chr10 136889938 136890385 -3426380 - MLT1C LTR MaLR 0 467 4 258 339 35 28 chr10 136890437 136890691 -3426074 - L2 LINE L2 -1351 1963 1708 36 0 0 0 chr10 136890828 136890864 -3425901 + AT_rich Low_complexity Low_complexity 1 36 0 279 230 22 112 chr10 136890913 136890997 -3425768 - L1ME4a LINE L1 -107 6014 5953 1876 133 0 3 chr10 136890997 136891282 -3425483 + AluSx SINE Alu 1 284 -28 279 230 22 112 chr10 136891282 136891375 -3425390 - L1ME4a LINE L1 -168 5953 5853 361 213 12 0 chr10 136891467 136891547 -3425218 - L1ME4a LINE L1 -303 5818 5738 366 190 25 38 chr10 136891618 136891697 -3425068 - L1MCa LINE L1 -4354 2072 1995 1190 174 219 0 chr10 136892421 136892668 -3424097 + AluJb SINE Alu 1 301 -1 1332 34 17 6 chr10 136892698 136892742 -3424023 + (GAAA)n Simple_repeat Simple_repeat 1 224 0 1332 34 17 6 chr10 136892742 136892920 -3423845 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 344 220 55 18 chr10 136894075 136894184 -3422581 + L1MC4a LINE L1 5814 5926 -1882 338 261 36 43 chr10 136894600 136894738 -3422027 - L1ME4a LINE L1 -32 6089 5953 2046 108 3 7 chr10 136897241 136897536 -3419229 + AluSx SINE Alu 1 294 -18 634 224 0 0 chr10 136900627 136900779 -3415986 + L1MA4 LINE L1 6138 6289 -11 207 217 14 58 chr10 136903456 136903525 -3413240 + CT-rich Low_complexity Low_complexity 3 68 0 190 331 102 8 chr10 136904281 136904408 -3412357 + L2 LINE L2 3175 3313 0 503 207 116 9 chr10 136904488 136904648 -3412117 - L1MA9 LINE L1 -4 6308 6106 219 188 0 0 chr10 136904781 136904829 -3411936 + (CA)n Simple_repeat Simple_repeat 2 49 0 236 285 31 62 chr10 136906756 136906886 -3409879 - MIR3 SINE MIR -14 194 69 378 232 78 103 chr10 136907248 136907408 -3409357 - MIR SINE MIR -12 250 95 1956 154 0 0 chr10 136907408 136907720 -3409045 + AluSx SINE Alu 1 312 0 378 232 78 103 chr10 136907720 136907794 -3408971 - MIR SINE MIR -167 95 21 182 256 110 12 chr10 136908352 136908434 -3408331 - L3b LINE CR1 -299 1284 1195 239 236 112 34 chr10 136909846 136909935 -3406830 - L2 LINE L2 -153 3119 3024 469 245 61 85 chr10 136910386 136910598 -3406167 - MLT1J LTR MaLR -194 317 111 232 242 45 15 chr10 136910543 136910609 -3406156 - LTR67 LTR ERVL -385 172 105 * 1259 112 11 0 chr10 136910734 136910922 -3405843 + L1PB2 LINE L1 5960 6149 -2 2102 118 0 9 chr10 136911395 136911710 -3405055 - AluSx SINE Alu 0 312 1 481 258 120 43 chr10 136912043 136912252 -3404513 + MIR SINE MIR 38 262 0 2479 87 26 11 chr10 136913031 136913378 -3403387 + L1PB1 LINE L1 5799 6150 -1 393 300 93 67 chr10 136913801 136914211 -3402554 + L1M4 LINE L1 4565 4995 -1151 489 300 103 15 chr10 136914306 136914760 -3402005 + L1ME LINE L1 5261 5754 -410 315 278 85 40 chr10 136915241 136915417 -3401348 + L1M4 LINE L1 5121 5304 -842 28 48 0 0 chr10 136916978 136917020 -3399745 + AT_rich Low_complexity Low_complexity 1 42 0 325 291 97 23 chr10 136917715 136917890 -3398875 + MIR SINE MIR 54 241 -21 190 188 39 162 chr10 136918380 136918534 -3398231 - L2 LINE L2 -416 2898 2764 333 68 0 0 chr10 136920361 136920405 -3396360 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr10 136923249 136923271 -3393494 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 136924813 136924835 -3391930 + AT_rich Low_complexity Low_complexity 1 22 0 649 215 54 108 chr10 136926618 136926881 -3389884 - MER96B DNA MER1_type? -118 299 53 2163 99 0 0 chr10 136926881 136927206 -3389559 + AluSx SINE Alu 1 325 0 649 215 54 108 chr10 136927206 136927257 -3389508 - MER96B DNA MER1_type? -364 53 1 453 230 166 30 chr10 136929532 136929767 -3386998 + MLT1K LTR MaLR 322 588 0 22 35 0 0 chr10 136930165 136930194 -3386571 + AT_rich Low_complexity Low_complexity 1 29 0 221 345 43 14 chr10 136930448 136930558 -3386207 - L2 LINE L2 -70 3243 3127 2106 106 3 3 chr10 136930558 136930859 -3385906 + AluSx SINE Alu 1 301 -11 221 345 43 14 chr10 136930859 136930887 -3385878 - L2 LINE L2 -186 3127 3101 410 281 92 11 chr10 136931178 136931322 -3385443 + MIR SINE MIR 43 191 -67 1872 125 39 0 chr10 136932606 136932885 -3383880 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr10 136934310 136934341 -3382424 + AT_rich Low_complexity Low_complexity 1 31 0 3296 273 79 59 chr10 136934353 136936325 -3380440 + HAL1 LINE L1 1 2168 -339 685 252 229 0 chr10 136936852 136937062 -3379703 + MIR SINE MIR 5 262 0 531 269 69 6 chr10 136937177 136937337 -3379428 - MLT1J LTR MaLR -340 171 2 215 308 31 0 chr10 136939522 136939587 -3377178 - L2 LINE L2 -214 3058 2992 3302 96 16 0 chr10 136941938 136942377 -3374388 - MLT2A2 LTR ERVL -7 446 1 659 286 79 83 chr10 136942580 136943062 -3373703 + MLT1L LTR MaLR 118 597 -18 341 328 64 8 chr10 136943070 136943195 -3373570 - MER5A DNA MER1_type -23 166 35 226 231 39 51 chr10 136943969 136944047 -3372718 + MER5A DNA MER1_type 61 137 -52 212 95 24 48 chr10 136944019 136944061 -3372704 - MER5A DNA MER1_type -99 90 50 * 256 355 78 37 chr10 136944136 136944353 -3372412 + MIR SINE MIR 37 262 0 240 200 60 10 chr10 136945884 136945984 -3370781 + (ATTG)n Simple_repeat Simple_repeat 2 106 0 250 348 43 11 chr10 136946870 136946962 -3369803 + L2 LINE L2 3147 3241 -31 1926 194 27 67 chr10 136948444 136948924 -3367841 + MLT1C LTR MaLR 6 466 -1 260 310 140 0 chr10 136949436 136949607 -3367158 - MLT1L LTR MaLR 0 615 421 213 39 0 0 chr10 136952508 136952534 -3364231 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 249 139 0 0 chr10 136952589 136952632 -3364133 + (GA)n Simple_repeat Simple_repeat 2 44 0 721 161 181 0 chr10 136952944 136953099 -3363666 - MER53 DNA DNA 0 189 7 590 315 92 47 chr10 136953586 136954008 -3362757 - L2 LINE L2 -1 3312 2872 1144 101 0 45 chr10 136954280 136954459 -3362306 + AluSg/x SINE Alu 132 302 -8 1662 202 64 5 chr10 136954508 136954899 -3361866 - Zaphod DNA AcHobo -23 4008 3595 360 148 108 151 chr10 136954903 136954947 -3361818 - Zaphod DNA AcHobo -3078 953 909 1390 163 10 50 chr10 136954947 136955247 -3361518 + AluJo SINE Alu 1 288 -24 360 148 108 151 chr10 136955247 136955480 -3361285 - Zaphod DNA AcHobo -3122 909 688 857 144 8 0 chr10 136955534 136955666 -3361099 + FLAM_C SINE Alu 1 133 -10 312 200 71 0 chr10 136955678 136955748 -3361017 + AluJ/FRAM SINE Alu 227 301 -1 610 185 11 17 chr10 136955748 136955926 -3360839 + GA-rich Low_complexity Low_complexity 2 178 0 1411 259 94 41 chr10 136955945 136956508 -3360257 - Zaphod DNA AcHobo -3373 658 66 896 257 29 23 chr10 136956587 136956894 -3359871 - L2 LINE L2 -881 2433 2125 3727 166 19 34 chr10 136956916 136957064 -3359701 + L1MB3 LINE L1 5452 5601 -582 2096 114 0 7 chr10 136957064 136957362 -3359403 + AluSx SINE Alu 1 296 -16 3727 166 19 34 chr10 136957362 136957949 -3358816 + L1MB3 LINE L1 5601 6176 -7 1955 204 78 39 chr10 136958894 136959356 -3357409 + MLT2B1 LTR ERVL 1 480 -40 3211 175 47 2 chr10 136959359 136959935 -3356830 + MER7C DNA MER2_type 1 602 0 302 0 26 0 chr10 136959936 136959974 -3356791 + (CA)n Simple_repeat Simple_repeat 2 40 0 29 0 0 0 chr10 136960865 136960894 -3355871 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr10 136961499 136961522 -3355243 + (A)n Simple_repeat Simple_repeat 1 23 0 404 320 42 31 chr10 136961812 136962014 -3354751 - MIR SINE MIR -18 244 42 206 161 25 49 chr10 136965165 136965246 -3351519 + CT-rich Low_complexity Low_complexity 6 84 0 527 224 34 84 chr10 136965321 136965436 -3351329 + MIR SINE MIR 63 167 -95 1769 154 3 20 chr10 136965436 136965754 -3351011 - AluSx SINE Alu 0 312 1 527 224 34 84 chr10 136965754 136965817 -3350948 + MIR SINE MIR 167 232 -30 539 215 45 68 chr10 136965826 136966003 -3350762 - MLT1K LTR MaLR 0 588 416 632 254 61 0 chr10 136966289 136966454 -3350311 + MIR SINE MIR 63 237 -25 752 182 250 0 chr10 136966491 136966683 -3350082 - Tigger3(Golem) DNA MER2_type -18 3011 2772 * 890 182 0 7 chr10 136966680 136966823 -3349942 - Tigger3(Golem) DNA MER2_type -2887 142 1 227 265 60 80 chr10 136967405 136967556 -3349209 + MLT1K LTR MaLR 138 285 -303 2214 112 0 6 chr10 136969073 136969387 -3347378 + AluSx SINE Alu 1 312 0 227 269 28 102 chr10 136971745 136971853 -3344912 - MIR SINE MIR -68 140 49 463 258 0 8 chr10 136971853 136971973 -3344792 + MER117 DNA MER1_type 8 126 -71 1157 223 181 22 chr10 136972422 136972825 -3343940 - MLT1C LTR MaLR 0 467 1 380 224 32 45 chr10 136973410 136973566 -3343199 + C-rich Low_complexity Low_complexity 2 155 0 2026 124 7 3 chr10 136974958 136975257 -3341508 + AluSx SINE Alu 1 300 -12 1722 153 0 17 chr10 136976066 136976367 -3340398 - AluJo SINE Alu -16 296 1 208 283 20 50 chr10 136977983 136978082 -3338683 + MER5A DNA MER1_type 23 118 -71 281 328 42 17 chr10 136978900 136979019 -3337746 + MIR SINE MIR 9 130 -132 395 354 34 25 chr10 136979714 136979951 -3336814 - MIR SINE MIR -22 240 2 257 227 30 0 chr10 136982320 136982386 -3334379 + MER81 DNA DNA 41 108 -6 1163 216 31 77 chr10 136983755 136984143 -3332622 + MLT1A2 LTR MaLR 1 370 -4 2955 218 93 0 chr10 136986194 136986950 -3329815 - Charlie1 DNA MER1_type -4 2757 1932 849 129 0 0 chr10 136986951 136987075 -3329690 + FLAM_C SINE Alu 1 124 -19 692 264 125 10 chr10 136987088 136987384 -3329381 - Charlie1 DNA MER1_type -822 1939 1610 226 303 0 0 chr10 136987446 136987512 -3329253 - Charlie1 DNA MER1_type -1247 1514 1449 4782 259 68 33 chr10 136987582 136990134 -3326631 - L1MEc LINE L1 -2259 3956 1304 1612 147 125 3 chr10 136990134 136990215 -3326550 - MER46B DNA MER2_type -2497 234 164 321 109 0 0 chr10 136990215 136990270 -3326495 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1612 147 125 3 chr10 136990270 136990507 -3326258 - MER46B DNA MER2_type -2567 164 2 4782 259 68 33 chr10 136990507 136991224 -3325541 - L1MEc LINE L1 -4911 1304 613 350 185 19 19 chr10 136991249 136991357 -3325408 + (TATG)n Simple_repeat Simple_repeat 2 109 0 728 307 58 34 chr10 136991374 136991845 -3324920 - L1MEc LINE L1 -5797 599 114 1000 159 97 58 chr10 136991845 136992071 -3324694 + MER46A DNA MER2_type 2 236 0 728 307 58 34 chr10 136992071 136992097 -3324668 - L1MEc LINE L1 -6282 114 90 1985 134 0 31 chr10 136992523 136992844 -3323921 - AluSx SINE Alu -1 311 1 592 195 24 12 chr10 136993969 136994133 -3322632 - L1M4 LINE L1 -797 5349 5184 216 0 0 0 chr10 136994268 136994292 -3322473 + (TG)n Simple_repeat Simple_repeat 2 25 0 447 186 0 0 chr10 136994300 136994397 -3322368 + (CA)n Simple_repeat Simple_repeat 2 98 0 1203 271 75 88 chr10 136994570 136995434 -3321331 - L1ME LINE L1 -643 5801 4969 2174 117 0 3 chr10 136995434 136995742 -3321023 + AluSg SINE Alu 1 307 -3 1203 271 75 88 chr10 136995742 136996417 -3320348 - L1ME LINE L1 -1475 4969 4287 471 316 9 10 chr10 136996552 136996764 -3320001 - L1ME LINE L1 -2163 4263 4053 597 233 150 36 chr10 136996923 136997369 -3319396 - L1ME LINE L1 -3992 2615 2119 937 301 70 28 chr10 136997593 136998437 -3318328 - L1ME LINE L1 -4800 1807 900 355 288 61 98 chr10 136999281 136999607 -3317158 - L1MEd LINE L1 -5238 881 568 229 155 35 52 chr10 137000819 137000877 -3315888 + MIR SINE MIR 97 153 -55 1094 169 19 19 chr10 137000878 137001085 -3315680 + MER3 DNA MER1_type 1 207 -2 28 61 0 0 chr10 137003178 137003227 -3313538 + AT_rich Low_complexity Low_complexity 1 49 0 752 167 0 0 chr10 137003227 137003347 -3313418 - FLAM_C SINE Alu -22 121 2 425 273 100 20 chr10 137003830 137003980 -3312785 - L1MD3 LINE L1 -11 7984 7823 3353 227 46 54 chr10 137003981 137004008 -3312757 - L1MC4a LINE L1 -252 7556 7530 1835 196 20 0 chr10 137004008 137004365 -3312400 + MLT1A1 LTR MaLR 1 364 -1 3353 227 46 54 chr10 137004365 137005453 -3311312 - L1MC4a LINE L1 -278 7530 6450 459 333 20 20 chr10 137006704 137006902 -3309863 + MIR SINE MIR 1 198 -64 1500 173 42 3 chr10 137006923 137007206 -3309559 - AluJb SINE Alu -18 294 1 194 186 23 23 chr10 137007318 137007361 -3309404 - L3 LINE CR1 0 1577 1535 427 239 134 0 chr10 137008597 137008731 -3308034 + MIR SINE MIR 80 231 -31 1392 265 156 12 chr10 137010340 137010993 -3305772 - MER20B DNA MER1_type -3 780 34 290 218 13 26 chr10 137012021 137012099 -3304666 - MER20B DNA MER1_type -350 433 357 957 191 59 20 chr10 137012399 137012603 -3304162 + MER20 DNA MER1_type 1 212 -7 302 350 35 14 chr10 137013268 137013411 -3303354 + MIR SINE MIR 2 147 -115 2242 86 3 6 chr10 137014888 137015202 -3301563 - AluSq SINE Alu 0 313 1 3166 196 50 3 chr10 137019103 137019763 -3297002 + L1MB4 LINE L1 5489 6179 -1 1527 191 123 0 chr10 137020924 137021249 -3295516 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr10 137022283 137022303 -3294462 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 402 21 0 0 chr10 137024683 137024730 -3292035 + (CA)n Simple_repeat Simple_repeat 2 48 0 545 179 9 9 chr10 137024731 137024837 -3291928 + Tigger2a DNA MER2_type 4 109 -325 1922 160 46 0 chr10 137024962 137025287 -3291478 + Tigger2a DNA MER2_type 95 434 0 638 183 99 15 chr10 137026295 137026426 -3290339 + FLAM_C SINE Alu 1 142 -1 274 328 86 0 chr10 137026589 137026717 -3290048 - MER58B DNA MER1_type -8 333 195 189 275 0 0 chr10 137027614 137027654 -3289111 + MIR3 SINE MIR 119 158 -50 180 0 0 0 chr10 137030660 137030680 -3286085 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2650 46 3 0 chr10 137030978 137031285 -3285480 - AluY SINE Alu -3 308 1 607 221 8 0 chr10 137032926 137033053 -3283712 - FLAM_A SINE Alu -5 128 1 199 290 62 34 chr10 137034245 137034421 -3282344 + L2 LINE L2 2882 3062 -210 296 272 12 37 chr10 137034517 137034598 -3282167 - L2 LINE L2 -5 3267 3189 260 195 73 49 chr10 137035129 137035211 -3281554 - MLT1J LTR MaLR -193 318 235 374 259 220 21 chr10 137035291 137035627 -3281138 - L2 LINE L2 -87 3226 2824 1769 117 71 3 chr10 137035665 137035947 -3280818 - MER1B DNA MER1_type -4 335 35 235 228 0 0 chr10 137036221 137036278 -3280487 - L1MEc LINE L1 -4580 1816 1760 2078 129 3 19 chr10 137036281 137036598 -3280167 - AluJb SINE Alu 0 312 1 301 185 56 0 chr10 137036715 137036769 -3279996 - L1MC3 LINE L1 0 7785 7729 230 306 81 36 chr10 137036988 137037099 -3279666 + L2 LINE L2 2642 2757 -557 420 284 6 41 chr10 137039885 137040054 -3276711 + LTR67 LTR ERVL 395 557 0 982 253 9 13 chr10 137041563 137041788 -3274977 - MER58A DNA MER1_type 0 224 1 849 166 0 0 chr10 137041978 137042117 -3274648 + FRAM SINE Alu 26 164 -12 1078 194 28 0 chr10 137042174 137042354 -3274411 - AluJo SINE Alu -125 187 3 505 166 124 48 chr10 137044849 137044994 -3271771 - L1ME2 LINE L1 -1 6163 6008 1840 253 102 46 chr10 137045004 137045337 -3271428 - L1ME2 LINE L1 -482 5682 5369 2448 90 0 0 chr10 137045337 137045637 -3271128 - AluSg SINE Alu -10 300 1 1840 253 102 46 chr10 137045637 137046204 -3270561 - L1ME2 LINE L1 -795 5369 4835 2374 64 0 0 chr10 137046204 137046509 -3270256 - AluY SINE Alu 0 305 1 1840 253 102 46 chr10 137046509 137047532 -3269233 - L1ME2 LINE L1 -1329 4835 3496 495 155 18 137 chr10 137057091 137057143 -3259622 - L1MB2 LINE L1 -86 6097 6040 2286 111 3 0 chr10 137057143 137057449 -3259316 - AluSx SINE Alu -5 307 1 495 155 18 137 chr10 137057449 137057564 -3259201 - L1MB2 LINE L1 -143 6040 5950 445 230 388 5 chr10 137060953 137061149 -3255616 - L1ME4a LINE L1 -44 6077 5807 574 254 58 26 chr10 137061586 137061775 -3254990 + MIR SINE MIR 56 250 -12 216 291 139 0 chr10 137062032 137062118 -3254647 + L2 LINE L2 3197 3294 -19 1988 131 16 29 chr10 137062132 137062445 -3254320 + AluJo SINE Alu 1 309 -3 1185 223 14 11 chr10 137062922 137063209 -3253556 + MLT1B LTR MaLR 22 309 -81 396 0 0 0 chr10 137067658 137067702 -3249063 + (TG)n Simple_repeat Simple_repeat 2 45 0 197 289 127 56 chr10 137069415 137069557 -3247208 + MIR SINE MIR 63 214 -48 1534 227 52 3 chr10 137069575 137069923 -3246842 + MER47A DNA MER2_type 1 365 -1 24 0 0 0 chr10 137070246 137070270 -3246495 + AT_rich Low_complexity Low_complexity 1 24 0 776 211 9 0 chr10 137070974 137071300 -3245465 + CT-rich Low_complexity Low_complexity 1 329 0 221 288 82 53 chr10 137075628 137075798 -3240967 + MIR SINE MIR 10 184 -78 392 277 155 13 chr10 137079634 137079789 -3236976 - L1ME4a LINE L1 -743 5441 5265 749 126 93 20 chr10 137079859 137080010 -3236755 - L1MD3 LINE L1 0 7995 7834 244 267 114 38 chr10 137081171 137081276 -3235489 + MIR3 SINE MIR 45 157 -51 24418 26 4 0 chr10 137081635 137085276 -3231489 + L1PA4 LINE L1 2509 6155 0 627 286 38 9 chr10 137086855 137087068 -3229697 - MIR SINE MIR -24 238 20 255 301 19 58 chr10 137090839 137090995 -3225770 + Charlie8 DNA MER1_type 3 152 -2265 2605 208 61 61 chr10 137091036 137091775 -3224990 - L1MB8 LINE L1 -7 6171 5433 402 250 0 0 chr10 137091951 137092031 -3224734 - MER44D DNA MER2_type 0 609 530 * 1063 206 91 67 chr10 137092027 137092357 -3224408 + MER2 DNA MER2_type 8 345 0 2336 173 54 22 chr10 137092362 137092808 -3223957 - MER44D DNA MER2_type -90 515 1 1459 220 48 116 chr10 137092848 137093452 -3223313 - L1ME1 LINE L1 -99 6067 5505 374 270 99 11 chr10 137093466 137094066 -3222699 - L1MDa LINE L1 -4511 1704 1004 1221 113 4 2 chr10 137094068 137094315 -3222450 - AluSc SINE Alu -9 300 2 1186 226 44 11 chr10 137094317 137094679 -3222086 - L1MDa LINE L1 -5416 980 607 918 232 27 50 chr10 137094685 137094993 -3221772 + MLT1E1 LTR MaLR 325 653 -1 3071 239 122 31 chr10 137098168 137098230 -3218535 + Charlie1 DNA MER1_type 1528 1583 -1178 2270 91 0 3 chr10 137098230 137098539 -3218226 + AluSg SINE Alu 1 308 -2 3071 239 122 31 chr10 137098539 137099572 -3217193 + Charlie1 DNA MER1_type 1583 2723 -38 2442 205 110 25 chr10 137100219 137100863 -3215902 - LTR34 LTR ERV1 0 699 1 495 296 92 5 chr10 137104215 137104411 -3212354 + MER58C DNA MER1_type 3 215 0 274 305 49 0 chr10 137104655 137104737 -3212028 - L2 LINE L2 -22 3291 3206 452 261 91 30 chr10 137104825 137105024 -3211741 + MIR SINE MIR 21 231 -31 1825 149 158 3 chr10 137105594 137105943 -3210822 - MER57A LTR ERV1 0 403 1 330 26 0 0 chr10 137106547 137106586 -3210179 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr10 137115147 137115175 -3201590 + AT_rich Low_complexity Low_complexity 1 28 0 834 262 145 20 chr10 137116857 137117169 -3199596 + L2 LINE L2 2777 3172 -141 612 236 131 10 chr10 137117169 137117368 -3199397 + MER58A DNA MER1_type 1 223 -1 834 262 145 20 chr10 137117368 137117530 -3199235 + L2 LINE L2 3172 3312 -1 451 285 125 50 chr10 137117691 137117741 -3199024 - LTR16A LTR ERVL -18 432 387 1952 166 122 10 chr10 137117741 137118126 -3198639 - MSTA LTR MaLR 0 428 1 451 285 125 50 chr10 137118126 137118356 -3198409 - LTR16A LTR ERVL -63 387 131 2927 121 26 17 chr10 137118461 137119052 -3197713 - MER4E LTR ERV1 0 766 1 1561 182 101 0 chr10 137120513 137120859 -3195906 - L1MB3 LINE L1 0 6183 5803 5173 109 0 22 chr10 137123541 137124443 -3192322 - L1PA15 LINE L1 0 6165 5227 3217 251 141 51 chr10 137124888 137127555 -3189210 - L1MDa LINE L1 -1278 4937 2029 850 250 5 5 chr10 137127556 137127760 -3189005 + MER3 DNA MER1_type 1 204 -5 530 279 34 61 chr10 137127760 137128022 -3188743 - L1MDa LINE L1 -4327 2069 1815 302 263 35 70 chr10 137128089 137128260 -3188505 - L2 LINE L2 -624 2690 2526 192 77 0 0 chr10 137130109 137130135 -3186630 + (TA)n Simple_repeat Simple_repeat 1 26 0 1294 182 85 4 chr10 137130144 137130402 -3186363 - AluJo SINE Alu -33 279 1 395 356 16 21 chr10 137131075 137131269 -3185496 + L1ME LINE L1 2031 2223 -4173 420 250 81 49 chr10 137131460 137131744 -3185021 + L1ME LINE L1 3174 3466 -2749 1385 249 64 30 chr10 137131777 137132274 -3184491 + L1ME LINE L1 3543 4056 -2159 216 158 0 0 chr10 137132308 137132346 -3184419 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 167 0 13 chr10 137138127 137138432 -3178333 + AluJo SINE Alu 6 306 -6 830 137 0 8 chr10 137138486 137138617 -3178148 - FLAM_C SINE Alu -2 131 2 250 306 41 0 chr10 137138741 137138839 -3177926 - L1ME LINE L1 -294 5827 5726 268 233 41 14 chr10 137139134 137139207 -3177558 - L2 LINE L2 -1 3312 3238 351 306 139 31 chr10 137139549 137139873 -3176892 + L1ME LINE L1 5485 5843 -347 279 282 60 0 chr10 137140152 137140269 -3176496 - HAL1b LINE L1 -1 1347 1224 518 200 200 0 chr10 137140396 137140526 -3176239 - MER58B DNA MER1_type -11 330 175 3644 264 98 21 chr10 137140528 137141083 -3175682 - L1MDa LINE L1 -4614 1782 1271 204 40 0 0 chr10 137141083 137141108 -3175657 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 3644 264 98 21 chr10 137141108 137142173 -3174592 - L1MDa LINE L1 -5125 1271 37 209 314 105 0 chr10 137142871 137142957 -3173808 + MIR SINE MIR 162 256 -6 596 196 51 10 chr10 137143095 137143264 -3173501 - L1M4 LINE L1 -1975 4171 3999 322 235 12 0 chr10 137144078 137144159 -3172606 + MER96 DNA MER1_type? 2 83 -92 * 2061 179 8 36 chr10 137144157 137144548 -3172217 + MLT1B LTR MaLR 11 390 0 255 61 0 0 chr10 137145010 137145043 -3171722 + (A)n Simple_repeat Simple_repeat 1 33 0 561 285 102 0 chr10 137145070 137145305 -3171460 + HAL1 LINE L1 1403 1661 -846 382 330 57 0 chr10 137145313 137145577 -3171188 + L1M4 LINE L1 2134 2412 -3734 3795 244 143 19 chr10 137145794 137146678 -3170087 + L1M4 LINE L1 2317 3089 -3057 2103 134 0 0 chr10 137146678 137146976 -3169789 - AluSg SINE Alu -12 298 1 3795 244 143 19 chr10 137146976 137148035 -3168730 + L1M4 LINE L1 3089 4660 -1486 279 250 33 0 chr10 137149228 137149288 -3167477 - MER20B DNA MER1_type -668 115 54 913 189 0 12 chr10 137149366 137149535 -3167230 + AluJb SINE Alu 137 303 -9 192 359 63 28 chr10 137151446 137151588 -3165177 + L2 LINE L2 3126 3272 0 2255 119 0 7 chr10 137151699 137152002 -3164763 - AluSx SINE Alu -11 301 1 324 0 0 0 chr10 137153300 137153336 -3163429 + (TA)n Simple_repeat Simple_repeat 2 37 0 206 231 0 0 chr10 137155228 137155267 -3161498 + T-rich Low_complexity Low_complexity 4 42 0 1822 128 20 25 chr10 137163037 137163382 -3153383 - MER4A LTR ERV1 0 664 263 476 140 54 21 chr10 137163382 137163475 -3153290 - MER4A LTR ERV1 -566 98 3 268 266 35 79 chr10 137163933 137164162 -3152603 - L2 LINE L2 -1 3312 3094 465 19 0 0 chr10 137164258 137164312 -3152453 + (CA)n Simple_repeat Simple_repeat 2 55 0 465 19 0 0 chr10 137164849 137164903 -3151862 + (CA)n Simple_repeat Simple_repeat 2 55 0 2273 104 0 7 chr10 137166249 137166548 -3150217 + AluSx SINE Alu 1 297 -15 194 303 15 15 chr10 137167550 137167616 -3149149 - L2 LINE L2 -56 3216 3151 288 77 0 0 chr10 137167950 137167989 -3148776 + (CA)n Simple_repeat Simple_repeat 2 40 0 582 267 75 39 chr10 137168326 137168607 -3148158 - L1ME LINE L1 -330 5791 5501 614 205 0 26 chr10 137169492 137169609 -3147156 + MER81 DNA DNA 1 114 0 381 314 116 31 chr10 137169913 137171342 -3145423 + L1ME1 LINE L1 2297 3845 -2301 1256 282 101 19 chr10 137171347 137171871 -3144894 + L1MC4a LINE L1 6231 6797 -1011 1145 253 63 16 chr10 137171899 137172294 -3144471 + L1ME1 LINE L1 5263 5676 -490 228 250 16 0 chr10 137172294 137172358 -3144407 + (CTCA)n Simple_repeat Simple_repeat 4 68 0 202 106 21 43 chr10 137172486 137172533 -3144232 + (TC)n Simple_repeat Simple_repeat 2 47 0 997 272 67 37 chr10 137172543 137172977 -3143788 + L1ME1 LINE L1 5700 6146 -20 * 1114 229 115 45 chr10 137172975 137173420 -3143345 + L1MC4 LINE L1 7560 8035 -7 446 273 91 61 chr10 137173428 137173989 -3142776 - L1ME LINE L1 -1457 4689 4112 248 233 52 69 chr10 137174349 137174465 -3142300 - L1ME3A LINE L1 -94 6059 5946 1231 250 91 68 chr10 137174546 137175410 -3141355 - L1ME3A LINE L1 -222 5931 5011 530 169 264 79 chr10 137175410 137175588 -3141177 - MER58C DNA MER1_type -4 211 1 1231 250 91 68 chr10 137175588 137176268 -3140497 - L1ME3A LINE L1 -1142 5011 4348 737 222 0 0 chr10 137176414 137176540 -3140225 - FLAM_A SINE Alu -4 129 4 232 277 0 8 chr10 137176553 137176672 -3140093 - L1ME3A LINE L1 -2884 3245 3128 3614 205 82 26 chr10 137176677 137177588 -3139177 - Cheshire DNA MER1_type -381 2039 1078 613 258 90 17 chr10 137177667 137178012 -3138753 + L1M4 LINE L1 3072 3441 -2705 312 245 59 20 chr10 137178016 137178118 -3138647 + L1ME1 LINE L1 6053 6158 -8 2723 227 139 7 chr10 137178270 137178602 -3138163 - MER63C DNA MER1_type -139 921 634 766 210 61 33 chr10 137178602 137178816 -3137949 + MER58A DNA MER1_type 1 220 -4 2723 227 139 7 chr10 137178816 137179297 -3137468 - MER63C DNA MER1_type -426 634 1 291 312 76 36 chr10 137179506 137179980 -3136785 - L1MEd LINE L1 -4862 1257 812 230 289 41 120 chr10 137181833 137182075 -3134690 - L2 LINE L2 -58 3214 2992 26 74 0 0 chr10 137184273 137184327 -3132438 + AT_rich Low_complexity Low_complexity 1 54 0 2230 123 0 3 chr10 137185803 137186103 -3130662 + AluSx SINE Alu 1 299 -13 1609 245 105 51 chr10 137188534 137188602 -3128163 + L1MD2 LINE L1 5160 5223 -1136 1262 231 8 0 chr10 137188602 137188836 -3127929 - MER8 DNA MER2_type -3 236 1 1609 245 105 51 chr10 137188836 137189845 -3126920 + L1MD2 LINE L1 5223 6357 -2 2300 111 0 0 chr10 137189866 137190163 -3126602 - AluSx SINE Alu -15 297 1 185 275 100 38 chr10 137192580 137192660 -3124105 + L2 LINE L2 3188 3272 0 1979 125 43 10 chr10 137193374 137193677 -3123088 - AluSq SINE Alu 0 313 1 350 281 40 52 chr10 137194119 137194301 -3122464 - L1M4 LINE L1 -1063 5083 4903 2546 149 15 2 chr10 137194302 137194711 -3122054 - MER61E LTR ERV1 0 569 156 7297 49 0 4 chr10 137194712 137195710 -3121055 - L1PA5 LINE L1 -1 6153 5150 581 39 0 0 chr10 137195711 137195789 -3120976 + L1PA5 LINE L1 5086 5163 -983 1596 147 118 14 chr10 137195963 137196242 -3120523 - AluJb SINE Alu -4 308 1 397 319 65 18 chr10 137198921 137199090 -3117675 + MIR SINE MIR 67 243 -19 496 87 14 0 chr10 137199468 137199537 -3117228 - MER58A DNA MER1_type -9 98 29 2158 123 0 0 chr10 137200641 137200934 -3115831 + AluSg SINE Alu 6 298 -12 186 220 34 102 chr10 137202995 137203054 -3113711 - L2 LINE L2 -95 3177 3123 521 265 132 10 chr10 137204411 137204615 -3112150 + MIR SINE MIR 21 249 -13 22 35 0 0 chr10 137206289 137206318 -3110447 + AT_rich Low_complexity Low_complexity 1 29 0 501 261 126 0 chr10 137207231 137207430 -3109335 - Tigger8 DNA MER2_type -295 371 148 1986 106 6 48 chr10 137213995 137214307 -3102458 + AluSq SINE Alu 1 299 -14 406 156 13 0 chr10 137218262 137218339 -3098426 - MER116 DNA Mariner 0 80 3 1423 210 40 65 chr10 137226408 137226808 -3089957 - MLT1B LTR MaLR 0 390 1 215 325 62 0 chr10 137226809 137226889 -3089876 + MIR SINE MIR 108 192 -70 253 345 29 14 chr10 137228299 137228438 -3088327 + L1ME2 LINE L1 329 469 -5927 1140 268 57 39 chr10 137228472 137229092 -3087673 + L1ME2 LINE L1 1769 2399 -3997 * 2090 240 96 76 chr10 137229085 137229739 -3087026 + L1ME2 LINE L1 4229 4868 -1365 2103 156 0 0 chr10 137229739 137230047 -3086718 + AluSx SINE Alu 1 308 -4 2090 240 96 76 chr10 137230047 137230142 -3086623 + L1ME2 LINE L1 4868 4960 -1273 1499 113 5 5 chr10 137230142 137230364 -3086401 - L1PB1 LINE L1 -1 6150 5929 2090 240 96 76 chr10 137230364 137231571 -3085194 + L1ME2 LINE L1 4960 6223 -10 354 263 75 89 chr10 137231612 137231825 -3084940 + L1MC4 LINE L1 7829 8038 -4 252 344 92 8 chr10 137233162 137233293 -3083472 - MIR SINE MIR -102 160 19 748 272 62 20 chr10 137234118 137234546 -3082219 + MLT1F LTR MaLR 6 603 -23 201 252 264 19 chr10 137234848 137235007 -3081758 - L2 LINE L2 -222 3050 2853 1911 215 53 31 chr10 137238273 137238372 -3078393 - Charlie1b DNA MER1_type -2261 500 405 1640 131 24 98 chr10 137238372 137238709 -3078056 - AluYb8 SINE Alu -6 312 1 1911 215 53 31 chr10 137238709 137239098 -3077667 - Charlie1b DNA MER1_type -2356 405 1 2955 57 0 8 chr10 137239167 137239555 -3077210 - L1PA6 LINE L1 0 6154 5770 41607 31 22 1 chr10 137239576 137245596 -3071169 - L1PA3 LINE L1 -4 6151 2 951 56 24 0 chr10 137245596 137245721 -3071044 - L1PA6 LINE L1 -368 5786 5659 * 5385 74 4 0 chr10 137245713 137246443 -3070322 + L1P LINE L1 3533 4265 -1881 1337 117 75 0 chr10 137246686 137246900 -3069865 - MER30 DNA MER1_type 0 230 1 231 271 0 0 chr10 137247844 137247903 -3068862 + MIR SINE MIR 204 262 0 1192 280 15 35 chr10 137252241 137252644 -3064121 - L1ME1 LINE L1 -1 6165 5771 2409 231 103 57 chr10 137252647 137252970 -3063795 - L1ME1 LINE L1 -745 5401 5094 2378 83 3 13 chr10 137252970 137253284 -3063481 + AluY SINE Alu 1 311 0 2409 231 103 57 chr10 137253284 137254472 -3062293 - L1ME1 LINE L1 -1052 5094 3881 10827 191 41 38 chr10 137254500 137257443 -3059322 - L1MC3 LINE L1 0 8045 5087 1955 157 3 9 chr10 137257443 137257786 -3058979 - MER2 DNA MER2_type -3 341 1 10827 191 41 38 chr10 137257786 137257879 -3058886 - L1MC3 LINE L1 -2958 5087 4996 2896 247 96 33 chr10 137258086 137260497 -3056268 - L1MC3 LINE L1 -3081 3325 794 1042 219 213 6 chr10 137261048 137261376 -3055389 - MSTD LTR MaLR 0 396 1 2490 82 0 0 chr10 137262944 137263249 -3053516 - AluSg SINE Alu -3 307 3 256 340 40 0 chr10 137266153 137266253 -3050512 - L2 LINE L2 -22 3291 3188 209 250 9 0 chr10 137270617 137270683 -3046082 + MIR SINE MIR 41 108 -100 311 175 0 0 chr10 137272645 137272702 -3044063 - MER58A DNA MER1_type 0 224 168 421 254 36 0 chr10 137272702 137272812 -3043953 - MER58A DNA MER1_type 0 118 5 189 0 0 0 chr10 137277554 137277575 -3039190 + (TCTG)n Simple_repeat Simple_repeat 1 21 0 237 188 0 0 chr10 137282713 137282761 -3034004 + L1P4 LINE L1 5722 5769 -397 186 103 0 0 chr10 137283016 137283045 -3033720 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 230 301 0 0 chr10 137285627 137285764 -3031001 + CT-rich Low_complexity Low_complexity 1 137 0 657 186 0 0 chr10 137285864 137285993 -3030772 + CT-rich Low_complexity Low_complexity 1 129 0 967 223 101 62 chr10 137286311 137286494 -3030271 + MLT1C LTR MaLR 6 180 -287 1652 183 7 23 chr10 137286494 137286795 -3029970 + AluJo SINE Alu 1 296 -16 967 223 101 62 chr10 137286795 137287046 -3029719 + MLT1C LTR MaLR 180 457 -10 187 303 101 20 chr10 137287229 137287328 -3029437 + MIR SINE MIR 29 135 -127 327 330 57 41 chr10 137287862 137288056 -3028709 + L1MC4a LINE L1 4733 4929 -1217 2313 66 0 30 chr10 137288217 137288519 -3028246 + AluY SINE Alu 1 293 -18 372 291 14 7 chr10 137288594 137288769 -3027996 + L1MC4a LINE L1 5215 5391 -774 601 346 15 28 chr10 137289090 137289417 -3027348 + L1MC4a LINE L1 5563 5885 -1923 2568 68 0 10 chr10 137289432 137289739 -3027026 + AluY SINE Alu 1 304 -7 188 100 25 0 chr10 137290006 137290046 -3026719 + (TG)n Simple_repeat Simple_repeat 2 42 0 2035 162 0 3 chr10 137292488 137292797 -3023968 + AluSx SINE Alu 1 308 -4 303 327 54 27 chr10 137293457 137293712 -3023053 + L1ME LINE L1 5597 5864 -298 2264 83 52 0 chr10 137294942 137295231 -3021534 + AluSx SINE Alu 1 304 -8 254 188 220 16 chr10 137295238 137295424 -3021341 + Charlie1 DNA MER1_type 2506 2729 -32 5324 125 19 16 chr10 137295516 137296496 -3020269 + L1PB3 LINE L1 5174 6153 -1 25 0 0 0 chr10 137297882 137297907 -3018858 + AT_rich Low_complexity Low_complexity 1 25 0 235 270 9 54 chr10 137298834 137298945 -3017820 + (CA)n Simple_repeat Simple_repeat 2 107 0 374 353 8 0 chr10 137299705 137299827 -3016938 + C-rich Low_complexity Low_complexity 3 125 0 180 0 0 0 chr10 137301834 137301854 -3014911 + (A)n Simple_repeat Simple_repeat 1 20 0 238 277 119 34 chr10 137301993 137302170 -3014595 - MIR SINE MIR -55 207 16 585 266 122 16 chr10 137302255 137302443 -3014322 - L2 LINE L2 0 3313 3106 1956 354 59 16 chr10 137303677 137304684 -3012081 + L1M4 LINE L1 3654 4703 -1443 1343 210 44 44 chr10 137304707 137305140 -3011625 + L1ME2 LINE L1 5711 6143 -21 239 276 41 0 chr10 137305169 137305267 -3011498 + L1MC5 LINE L1 7800 7901 -60 273 272 37 0 chr10 137307959 137308040 -3008725 - L1ME2 LINE L1 -42 6122 6039 * 1731 222 15 2 chr10 137308039 137308436 -3008329 + L1MB3 LINE L1 5672 6073 -110 1548 242 88 32 chr10 137308434 137309017 -3007748 - L1ME2 LINE L1 -220 5944 5310 * 808 147 31 0 chr10 137309017 137309146 -3007619 - FLAM_C SINE Alu 0 133 1 1548 242 88 32 chr10 137309146 137309291 -3007474 - L1ME2 LINE L1 -854 5310 5175 246 297 102 8 chr10 137309291 137309409 -3007356 - LTR67 LTR ERVL -51 506 378 1454 208 9 15 chr10 137309493 137309825 -3006940 - L1MD3 LINE L1 -8 7987 7658 2570 265 45 44 chr10 137309826 137310916 -3005849 - L1ME2 LINE L1 -1819 4327 3237 1747 112 116 0 chr10 137310924 137311175 -3005590 - AluSx SINE Alu -3 309 30 717 267 100 46 chr10 137311179 137311641 -3005124 - MLT1H LTR MaLR -2 652 53 239 307 11 0 chr10 137312948 137313036 -3003729 - MLT1-int LTR MaLR -1269 102 14 274 264 109 32 chr10 137313249 137313469 -3003296 - MLT1H LTR MaLR -256 293 57 182 31 0 62 chr10 137314811 137314843 -3001922 + (CTGGGG)n Simple_repeat Simple_repeat 3 32 0 448 298 128 38 chr10 137314925 137315372 -3001393 + L1MC4 LINE L1 7555 8041 -1 1778 160 56 34 chr10 137320175 137320532 -2996233 + MLT1A1 LTR MaLR 1 365 0 1098 215 51 115 chr10 137323325 137323456 -2993309 - L1M4 LINE L1 -836 5310 5172 1643 184 7 0 chr10 137323456 137323734 -2993031 - AluJb SINE Alu -32 280 1 1098 215 51 115 chr10 137323734 137323996 -2992769 - L1M4 LINE L1 -974 5172 4967 2221 114 79 18 chr10 137323996 137324339 -2992426 + THE1B LTR MaLR 1 364 0 1098 215 51 115 chr10 137324339 137324553 -2992212 - L1M4 LINE L1 -1179 4967 4741 632 263 149 19 chr10 137324544 137324806 -2991959 - L1M4 LINE L1 -2667 3479 3184 * 222 250 65 56 chr10 137324834 137324942 -2991823 + MIR3 SINE MIR 100 208 0 199 405 22 32 chr10 137325063 137325248 -2991517 + L2 LINE L2 2882 3064 -208 456 337 168 36 chr10 137325363 137325468 -2991297 + L1MC4a LINE L1 4498 4588 -1558 1724 196 0 10 chr10 137325468 137325769 -2990996 + AluJo SINE Alu 1 298 -14 456 337 168 36 chr10 137325769 137326164 -2990601 + L1MC4a LINE L1 4588 5064 -1082 378 261 99 18 chr10 137326277 137326533 -2990232 + L1MC4a LINE L1 5198 5472 -748 506 254 8 16 chr10 137326543 137326665 -2990100 + L2 LINE L2 3181 3301 -12 1249 180 17 30 chr10 137326668 137326707 -2990058 - L1MB3 LINE L1 0 6183 6145 1768 186 3 0 chr10 137326707 137326992 -2989773 - AluJb SINE Alu -24 288 3 1249 180 17 30 chr10 137326992 137327247 -2989518 - L1MB3 LINE L1 -38 6145 5893 27 0 0 0 chr10 137327464 137327491 -2989274 + AT_rich Low_complexity Low_complexity 1 27 0 1926 258 72 26 chr10 137327580 137329159 -2987606 - L1ME3A LINE L1 -138 6032 4387 2364 98 0 0 chr10 137329168 137329463 -2987302 - AluY SINE Alu -12 299 5 361 254 92 14 chr10 137329523 137329665 -2987100 + L1MC4a LINE L1 5697 5849 -1959 1604 78 175 56 chr10 137329986 137330255 -2986510 - AluY SINE Alu 0 301 1 715 221 43 26 chr10 137330564 137330942 -2985823 - Charlie4a DNA MER1_type -14 494 40 638 256 113 44 chr10 137331020 137331383 -2985382 - L2 LINE L2 -57 3256 2869 369 272 44 87 chr10 137331404 137331610 -2985155 - L2 LINE L2 -563 2751 2555 4262 207 20 15 chr10 137332343 137332767 -2983998 - L1MB8 LINE L1 0 6178 5758 1894 169 7 0 chr10 137332767 137333063 -2983702 + AluJo SINE Alu 1 298 -14 4262 207 20 15 chr10 137333063 137334316 -2982449 - L1MB8 LINE L1 -420 5758 4490 1726 257 63 32 chr10 137334719 137335400 -2981365 - L1M4 LINE L1 -1174 4972 4271 1111 253 65 57 chr10 137335945 137336748 -2980017 - L1ME4a LINE L1 -96 6025 5216 229 169 0 42 chr10 137337232 137337303 -2979462 + C-rich Low_complexity Low_complexity 5 72 0 252 86 0 0 chr10 137337675 137337710 -2979055 + (TC)n Simple_repeat Simple_repeat 1 35 0 2399 86 0 7 chr10 137337712 137338014 -2978751 - AluSq SINE Alu -13 300 1 183 319 99 0 chr10 137338087 137338178 -2978587 + MIR SINE MIR 47 146 -116 185 0 0 39 chr10 137340137 137340163 -2976602 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr10 137342526 137342548 -2974217 + AT_rich Low_complexity Low_complexity 1 22 0 419 241 0 0 chr10 137345127 137345210 -2971555 + L2 LINE L2 3224 3306 -7 210 71 0 0 chr10 137346148 137346176 -2970589 + (CCCCCA)n Simple_repeat Simple_repeat 3 30 0 2320 110 0 0 chr10 137348457 137348757 -2968008 + AluSx SINE Alu 1 300 -12 351 0 0 0 chr10 137352084 137352123 -2964642 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr10 137359678 137359706 -2957059 + AT_rich Low_complexity Low_complexity 1 28 0 1359 220 64 15 chr10 137362241 137362568 -2954197 + L1MB7 LINE L1 5666 6008 -176 727 180 72 6 chr10 137362658 137362825 -2953940 + L1MB7 LINE L1 5991 6168 -16 2267 110 0 16 chr10 137365192 137365500 -2951265 - AluSx SINE Alu -9 303 1 214 216 0 0 chr10 137370878 137370915 -2945850 - L2 LINE L2 -18 3254 3218 1784 175 25 0 chr10 137372104 137372390 -2944375 - AluJb SINE Alu -19 293 1 525 246 87 22 chr10 137380810 137380993 -2935772 + L1MC2 LINE L1 6140 6334 -10 2372 93 3 6 chr10 137381160 137381471 -2935294 - AluSg SINE Alu 0 310 1 2229 105 34 0 chr10 137383184 137383478 -2933287 + AluSx SINE Alu 1 304 -8 479 187 223 7 chr10 137384175 137384314 -2932451 + MER53 DNA DNA 21 189 0 2165 93 25 0 chr10 137384381 137384659 -2932106 + AluSx SINE Alu 20 304 -8 901 116 0 0 chr10 137384693 137384822 -2931943 + AluSg/x SINE Alu 177 305 -7 525 249 4 0 chr10 137386242 137386479 -2930286 + (CA)n Simple_repeat Simple_repeat 1 238 0 946 184 20 15 chr10 137389712 137389908 -2926857 + L1MB5 LINE L1 5968 6164 -10 252 0 0 0 chr10 137392009 137392037 -2924728 + (T)n Simple_repeat Simple_repeat 1 28 0 270 0 0 0 chr10 137395922 137395952 -2920813 + (T)n Simple_repeat Simple_repeat 1 30 0 860 184 8 0 chr10 137410372 137410636 -2906129 + (TGGA)n Simple_repeat Simple_repeat 1 266 0 201 74 0 0 chr10 137410706 137410733 -2906032 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 748 244 44 29 chr10 137411183 137411458 -2905307 + MER33 DNA MER1_type 2 280 -44 221 269 0 0 chr10 137416366 137416418 -2900347 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 200 321 0 12 chr10 137417385 137417466 -2899299 + C-rich Low_complexity Low_complexity 4 83 0 354 45 0 0 chr10 137421430 137421474 -2895291 + (CA)n Simple_repeat Simple_repeat 1 44 0 303 283 46 59 chr10 137422245 137422397 -2894368 + MIR SINE MIR 76 225 -37 208 254 28 14 chr10 137422857 137422928 -2893837 + L3 LINE CR1 1495 1566 -11 2173 129 3 3 chr10 137423062 137423364 -2893401 + AluSx SINE Alu 1 302 -10 702 221 108 0 chr10 137423487 137423645 -2893120 + FAM SINE Alu 1 175 0 267 260 10 64 chr10 137423975 137424085 -2892680 - MIR SINE MIR -54 154 50 225 261 72 0 chr10 137426878 137426947 -2889818 + MIR SINE MIR 108 181 -81 569 282 59 0 chr10 137427203 137427405 -2889360 - MER20 DNA MER1_type -5 214 1 2774 196 30 54 chr10 137429309 137430108 -2886657 + L1M3 LINE L1 4682 5499 -672 2247 128 0 0 chr10 137430108 137430420 -2886345 + AluSx SINE Alu 1 312 0 2774 196 30 54 chr10 137430420 137430642 -2886123 + L1M3 LINE L1 5499 5673 -498 1596 195 20 14 chr10 137430642 137430939 -2885826 - AluJb SINE Alu -13 299 1 2774 196 30 54 chr10 137430939 137431045 -2885720 + L1M3 LINE L1 5673 5780 -391 273 119 0 0 chr10 137431045 137431087 -2885678 + (TG)n Simple_repeat Simple_repeat 2 43 0 356 22 0 0 chr10 137431089 137431134 -2885631 - MADE1 DNA Mariner -3 77 33 524 73 0 0 chr10 137431134 137431202 -2885563 + AluSx SINE Alu 2 69 -244 1779 107 0 8 chr10 137431353 137431595 -2885170 + AluSx SINE Alu 69 308 -2 586 107 36 0 chr10 137431602 137431714 -2885051 + L1MB3 LINE L1 6068 6183 0 243 0 0 0 chr10 137432139 137432166 -2884599 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 354 280 38 6 chr10 137434187 137434344 -2882421 - L1ME4a LINE L1 -5 6116 5955 241 310 123 13 chr10 137434447 137434602 -2882163 - L1ME4a LINE L1 -321 5800 5629 2093 146 0 3 chr10 137435172 137435481 -2881284 - AluJb SINE Alu -4 308 1 2648 189 22 18 chr10 137435793 137436335 -2880430 + MLT2B3 LTR ERVL 1 434 -19 205 277 68 0 chr10 137436353 137436501 -2880264 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 261 273 52 0 chr10 137436518 137436672 -2880093 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 242 266 58 0 chr10 137436698 137436837 -2879928 + (TCTA)n Simple_repeat Simple_repeat 4 150 0 364 107 0 4 chr10 137437105 137437169 -2879596 + MLT2B2 LTR ERVL 458 514 -1 225 94 0 0 chr10 137438857 137438889 -2877876 + (T)n Simple_repeat Simple_repeat 1 32 0 195 162 0 0 chr10 137439164 137439201 -2877564 + (CA)n Simple_repeat Simple_repeat 1 37 0 441 119 0 0 chr10 137439976 137440043 -2876722 + MER53 DNA DNA 1 67 -122 205 125 0 0 chr10 137440372 137440404 -2876361 + L2 LINE L2 3264 3295 -18 1757 155 6 43 chr10 137444233 137444555 -2872210 + AluJb SINE Alu 1 310 -2 195 114 0 0 chr10 137445480 137445515 -2871250 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 286 334 0 0 chr10 137446405 137446512 -2870253 + MIR SINE MIR 18 124 -84 828 124 0 0 chr10 137451029 137451166 -2865599 + (GGGGA)n Simple_repeat Simple_repeat 2 138 0 2142 183 54 50 chr10 137453879 137453955 -2862810 + L1MC2 LINE L1 5823 5897 -447 2253 92 0 7 chr10 137453955 137454261 -2862504 + AluSq SINE Alu 6 309 -4 2142 183 54 50 chr10 137454261 137454702 -2862063 + L1MC2 LINE L1 5897 6342 -2 2186 82 3 35 chr10 137454998 137455314 -2861451 + AluSp SINE Alu 7 312 -1 181 173 0 39 chr10 137455968 137456020 -2860745 + G-rich Low_complexity Low_complexity 5 54 0 22 0 0 0 chr10 137458368 137458390 -2858375 + AT_rich Low_complexity Low_complexity 1 22 0 300 200 0 0 chr10 137459007 137459072 -2857693 + A-rich Low_complexity Low_complexity 1 65 0 21 36 0 0 chr10 137464755 137464783 -2851982 + GC_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr10 137464874 137464905 -2851860 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 137466499 137466527 -2850238 + AT_rich Low_complexity Low_complexity 1 28 0 189 107 0 0 chr10 137466595 137466623 -2850142 + (T)n Simple_repeat Simple_repeat 1 28 0 56 29 0 0 chr10 137469533 137469603 -2847162 + GC_rich Low_complexity Low_complexity 1 70 0 23 68 0 0 chr10 137470161 137470205 -2846560 + GC_rich Low_complexity Low_complexity 1 44 0 288 217 0 56 chr10 137470342 137470503 -2846262 + (CCG)n Simple_repeat Simple_repeat 3 154 0 21 0 0 0 chr10 137475868 137475889 -2840876 + GC_rich Low_complexity Low_complexity 1 21 0 28 86 0 0 chr10 137477286 137477356 -2839409 + GC_rich Low_complexity Low_complexity 1 70 0 27 49 0 0 chr10 137477720 137477761 -2839004 + GC_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr10 137477808 137477840 -2838925 + GC_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr10 137477874 137477905 -2838860 + GC_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 137478804 137478851 -2837914 + GC_rich Low_complexity Low_complexity 1 47 0 26 88 0 0 chr10 137478897 137478965 -2837800 + GC_rich Low_complexity Low_complexity 1 68 0 207 0 0 0 chr10 137479605 137479628 -2837137 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 185 265 145 24 chr10 137480480 137480563 -2836202 - MIR SINE MIR -142 120 28 199 209 23 0 chr10 137481291 137481334 -2835431 - L2 LINE L2 -91 3222 3179 198 328 90 8 chr10 137481868 137481990 -2834775 + L2 LINE L2 3182 3313 0 317 299 78 32 chr10 137482011 137482165 -2834600 - L1MC4 LINE L1 0 8042 7882 1722 239 69 39 chr10 137483603 137484213 -2832552 + MLT1E2 LTR MaLR 3 626 0 247 235 111 86 chr10 137484378 137484540 -2832225 - MLT1H LTR MaLR -175 374 209 590 286 95 22 chr10 137485454 137485740 -2831025 + MLT1J2 LTR MaLR 123 429 -21 1950 138 26 3 chr10 137485782 137486087 -2830678 + AluSx SINE Alu 1 312 0 752 29 79 0 chr10 137486091 137486230 -2830535 + GA-rich Low_complexity Low_complexity 3 152 0 24 67 0 0 chr10 137486408 137486453 -2830312 + AT_rich Low_complexity Low_complexity 1 45 0 5837 221 45 20 chr10 137486623 137487889 -2828876 + L1MC/D LINE L1 1 1461 -5079 2200 97 3 0 chr10 137487889 137488187 -2828578 + AluSg SINE Alu 1 299 -11 5837 221 45 20 chr10 137488187 137488792 -2827973 + L1MC/D LINE L1 1461 2049 -4491 1125 174 45 14 chr10 137488828 137489139 -2827626 + L1MC/D LINE L1 2406 2726 -3814 8330 130 94 10 chr10 137489150 137490269 -2826496 + L1PB1 LINE L1 1 1025 -5837 2024 135 3 0 chr10 137490269 137490573 -2826192 + AluSg SINE Alu 6 310 0 8330 130 94 10 chr10 137490573 137491072 -2825693 + L1PB1 LINE L1 1025 1481 -5381 1832 157 7 3 chr10 137491072 137491377 -2825388 + AluSx SINE Alu 1 306 -6 8330 130 94 10 chr10 137491377 137492049 -2824716 + L1PB1 LINE L1 1481 2096 -4766 2022 126 3 13 chr10 137492049 137492350 -2824415 - AluSx SINE Alu -14 298 1 8330 130 94 10 chr10 137492350 137492982 -2823783 + L1PB1 LINE L1 2096 3410 -3452 9979 162 28 5 chr10 137492983 137495253 -2821512 + L1PB1 LINE L1 3884 6101 -766 189 0 0 0 chr10 137495253 137495274 -2821491 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 9979 162 28 5 chr10 137495274 137495560 -2821205 + L1PB1 LINE L1 6101 6379 -488 303 28 0 0 chr10 137495560 137495596 -2821169 + (CA)n Simple_repeat Simple_repeat 2 37 0 9979 162 28 5 chr10 137495596 137495954 -2820811 + L1PB1 LINE L1 6379 6866 -1 27 0 0 0 chr10 137495954 137495981 -2820784 + AT_rich Low_complexity Low_complexity 1 27 0 1536 237 30 60 chr10 137496119 137496530 -2820235 + L1MC/D LINE L1 2859 3248 -3292 2083 115 0 0 chr10 137496530 137496825 -2819940 - AluSx SINE Alu -17 295 1 1536 237 30 60 chr10 137496825 137497017 -2819748 + L1MC/D LINE L1 3248 3444 -3096 1700 197 20 7 chr10 137497034 137497600 -2819165 + L1MC/D LINE L1 5386 5959 -677 1199 115 26 5 chr10 137497601 137497793 -2818972 + L1M1 LINE L1 17 212 -7353 480 199 28 50 chr10 137497791 137497932 -2818833 + L1MDa LINE L1 1504 1641 -4899 * 1645 133 6 98 chr10 137497938 137498447 -2818318 + AluSx SINE Alu 5 482 0 408 220 0 11 chr10 137498447 137498550 -2818215 + L1MDa LINE L1 1528 1720 -4820 * 568 254 5 37 chr10 137498549 137498662 -2818103 - L1M4 LINE L1 -3822 2324 2217 2164 92 0 3 chr10 137498662 137498971 -2817794 - AluY SINE Alu 0 308 1 568 254 5 37 chr10 137498971 137499045 -2817720 - L1M4 LINE L1 -3929 2217 2142 * 5201 159 2 16 chr10 137499042 137499861 -2816904 + L1MA3 LINE L1 218 1025 -6540 * 7170 196 31 63 chr10 137499859 137502743 -2814022 + L1MA3 LINE L1 2461 5248 -2317 228 380 0 0 chr10 137502946 137503038 -2813727 + G-rich Low_complexity Low_complexity 1 92 0 304 318 5 58 chr10 137503215 137503404 -2813361 + A-rich Low_complexity Low_complexity 2 180 0 * 347 313 8 22 chr10 137503278 137503412 -2813353 + GA-rich Low_complexity Low_complexity 2 133 0 8438 126 11 13 chr10 137503585 137506009 -2810756 + L1MA3 LINE L1 5301 7722 -2 1693 148 0 24 chr10 137506031 137506362 -2810403 - AluSx SINE Alu 0 324 1 2409 200 46 86 chr10 137506379 137507099 -2809666 + L1MD1 LINE L1 5551 6241 -1 1023 181 0 0 chr10 137507104 137507270 -2809495 + FRAM SINE Alu 1 166 0 188 132 0 26 chr10 137507270 137507308 -2809457 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 1068 87 35 0 chr10 137507308 137507480 -2809285 + GA-rich Low_complexity Low_complexity 1 178 0 194 221 253 21 chr10 137507517 137507612 -2809153 - MIR SINE MIR -98 164 48 371 296 0 0 chr10 137507925 137508050 -2808715 + LTR16C LTR ERVL 301 425 -66 2308 138 8 13 chr10 137508061 137508438 -2808327 + THE1C LTR MaLR 1 375 0 1666 227 75 23 chr10 137508548 137509028 -2807737 - MLT1D LTR MaLR 0 505 1 260 224 53 0 chr10 137509095 137509134 -2807631 - AluS SINE Alu -223 80 44 1884 145 3 0 chr10 137509134 137509431 -2807334 - AluJb SINE Alu -14 298 1 260 224 53 0 chr10 137509431 137509467 -2807298 - AluS SINE Alu -259 44 1 243 118 0 0 chr10 137509469 137509503 -2807262 - Alu SINE Alu -99 34 1 636 279 50 72 chr10 137511366 137511768 -2804997 + HAL1 LINE L1 1374 1766 -741 656 235 132 37 chr10 137512196 137512439 -2804326 + L2 LINE L2 3046 3311 -2 319 243 110 51 chr10 137512660 137512915 -2803850 + HAL1 LINE L1 2230 2499 -8 396 265 54 48 chr10 137513182 137513348 -2803417 + L1M4 LINE L1 5213 5379 -767 266 315 0 0 chr10 137513381 137513454 -2803311 + GA-rich Low_complexity Low_complexity 1 73 0 1913 207 69 29 chr10 137513776 137513986 -2802779 - MLT1C LTR MaLR 0 467 267 2131 147 95 5 chr10 137513986 137514375 -2802390 + MSTA LTR MaLR 1 424 -4 1913 207 69 29 chr10 137514375 137514613 -2802152 - MLT1C LTR MaLR -200 267 1 31 68 0 0 chr10 137514711 137514770 -2801995 + AT_rich Low_complexity Low_complexity 1 59 0 935 219 45 3 chr10 137515093 137515342 -2801423 + MER7A DNA MER2_type 2 337 0 267 138 53 85 chr10 137515365 137515459 -2801306 + L1ME4a LINE L1 6022 6112 -9 414 144 19 18 chr10 137516516 137516590 -2800175 + MLT1C LTR MaLR 60 136 -254 807 173 3 0 chr10 137516590 137516738 -2800027 + MSTB1 LTR MaLR 1 152 -280 3800 127 43 0 chr10 137516738 137517319 -2799446 - MER4B LTR ERV1 -4 606 1 1048 107 13 0 chr10 137517319 137517468 -2799297 + MSTB1 LTR MaLR 281 431 -1 893 239 45 36 chr10 137517471 137517780 -2798985 + MLT1C LTR MaLR 142 453 -14 261 320 101 28 chr10 137518614 137518861 -2797904 + MLT1I LTR MaLR 113 377 -32 1133 218 16 29 chr10 137519140 137519448 -2797317 + L1MB8 LINE L1 5874 6177 -1 557 253 132 62 chr10 137520999 137521465 -2795300 + MLT1D LTR MaLR 1 467 0 2793 147 74 4 chr10 137522766 137523250 -2793515 + L1PA16 LINE L1 5640 6157 -9 298 313 0 0 chr10 137524030 137524110 -2792655 - MIR SINE MIR -105 157 78 367 279 139 0 chr10 137524152 137524274 -2792491 - MIR SINE MIR -22 240 102 687 204 52 23 chr10 137526037 137526209 -2790556 + HsTC2c DNA Tc2 513 689 -40 425 232 89 71 chr10 137526235 137526403 -2790362 + MER112 DNA MER1_type 79 249 -11 259 253 25 0 chr10 137526490 137526569 -2790196 - MER33 DNA MER1_type 0 363 283 688 184 24 0 chr10 137526572 137526697 -2790068 + FLAM_A SINE Alu 1 128 -14 1047 163 54 58 chr10 137526699 137526959 -2789806 - MER33 DNA MER1_type -74 250 1 675 247 7 0 chr10 137526957 137527103 -2789662 - MER58B DNA MER1_type 0 341 195 * 1342 221 100 26 chr10 137528730 137529160 -2787605 + MLT1C LTR MaLR 6 467 0 225 93 130 37 chr10 137530902 137531063 -2785702 + (CCTG)n Simple_repeat Simple_repeat 1 176 0 415 118 143 25 chr10 137531089 137531250 -2785515 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 241 273 0 0 chr10 137531732 137531787 -2784978 + MIR SINE MIR 86 140 -68 1213 218 74 40 chr10 137532024 137532401 -2784364 + MLT1B LTR MaLR 1 390 0 1936 90 87 0 chr10 137533148 137533425 -2783340 + AluSg SINE Alu 1 301 -9 954 50 0 0 chr10 137533425 137533545 -2783220 + (TA)n Simple_repeat Simple_repeat 2 121 0 1137 202 61 11 chr10 137535714 137536111 -2780654 - MLT1C LTR MaLR -3 464 8 1817 201 40 66 chr10 137536320 137536838 -2779927 - MLT1D LTR MaLR 0 505 1 1103 265 113 33 chr10 137536838 137537257 -2779508 - L1ME LINE L1 -3297 2783 2318 2148 63 0 70 chr10 137537257 137537572 -2779193 - AluY SINE Alu -18 293 1 1103 265 113 33 chr10 137537572 137537639 -2779126 - L1ME LINE L1 -3762 2318 2258 1582 123 0 0 chr10 137537639 137537867 -2778898 - AluSg/x SINE Alu -2 310 83 1271 143 151 0 chr10 137537967 137538205 -2778560 - MSTA LTR MaLR -154 274 1 2963 168 33 19 chr10 137538205 137538776 -2777989 - L1MB2 LINE L1 -147 6024 5446 464 253 6 25 chr10 137538773 137538935 -2777830 - L1ME LINE L1 -4067 2194 2036 * 264 207 207 0 chr10 137539024 137539111 -2777654 - L1ME LINE L1 -4582 1498 1394 2340 78 0 0 chr10 137539111 137539405 -2777360 - AluY SINE Alu -17 294 1 2754 108 7 32 chr10 137539405 137539699 -2777066 + MER75 DNA T2_type 91 372 -142 2093 107 50 0 chr10 137539699 137539980 -2776785 + AluSg SINE Alu 1 295 -15 2754 108 7 32 chr10 137539980 137540119 -2776646 + MER75 DNA T2_type 372 513 -1 1824 269 50 26 chr10 137540125 137540590 -2776175 - L1ME LINE L1 -4880 1200 718 2363 55 0 0 chr10 137540590 137540865 -2775900 - AluY SINE Alu -8 303 29 1824 269 50 26 chr10 137540865 137541209 -2775556 - L1ME LINE L1 -5362 718 384 1788 169 20 9 chr10 137541467 137541816 -2774949 - MLT1B LTR MaLR -37 353 1 198 308 67 17 chr10 137541953 137542073 -2774692 - MIR SINE MIR -55 207 82 * 265 263 256 31 chr10 137542062 137542136 -2774629 - MIR SINE MIR -7 255 199 1595 220 11 26 chr10 137542136 137542514 -2774251 - MLT1A2 LTR MaLR 0 374 3 265 263 256 31 chr10 137542514 137542599 -2774166 - MIR SINE MIR -63 199 60 378 276 20 0 chr10 137545324 137545422 -2771343 - MER81 DNA DNA -12 102 3 2274 212 36 10 chr10 137545523 137546023 -2770742 - MLT2B1 LTR ERVL 0 520 8 1804 113 95 7 chr10 137546916 137547190 -2769575 + AluSq SINE Alu 6 303 -10 423 247 96 59 chr10 137547703 137547985 -2768780 - L1MC/D LINE L1 -682 5651 5355 281 252 10 0 chr10 137548161 137548264 -2768501 + (CA)n Simple_repeat Simple_repeat 1 104 0 460 333 0 16 chr10 137548293 137548476 -2768289 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 295 149 14 chr10 137549178 137549459 -2767306 + L1MC5 LINE L1 7609 7927 -34 435 119 0 0 chr10 137550341 137550408 -2766357 + (GA)n Simple_repeat Simple_repeat 2 68 0 395 261 34 28 chr10 137552440 137552616 -2764149 + (CGGGG)n Simple_repeat Simple_repeat 3 179 0 22 56 0 0 chr10 137552912 137552948 -2763817 + AT_rich Low_complexity Low_complexity 1 36 0 1557 201 3 14 chr10 137555060 137555353 -2761412 - AluJo SINE Alu -22 290 1 1346 124 201 4 chr10 137556636 137556870 -2759895 + AluJb SINE Alu 1 280 -32 2157 79 0 45 chr10 137559402 137559719 -2757046 - AluSc SINE Alu 0 304 1 3780 198 30 0 chr10 137560362 137561133 -2755632 - L1MB1 LINE L1 -1 6167 5374 2656 167 39 81 chr10 137561130 137561826 -2754939 + L1MB1 LINE L1 4708 5374 -772 * 2412 92 0 13 chr10 137562012 137562326 -2754439 + AluSg SINE Alu 1 310 0 23 54 0 0 chr10 137562899 137562936 -2753829 + AT_rich Low_complexity Low_complexity 1 37 0 2521 73 0 0 chr10 137562939 137563239 -2753526 - AluY SINE Alu -11 300 1 1631 186 3 14 chr10 137563245 137563540 -2753225 - AluJb SINE Alu -20 292 1 935 163 38 11 chr10 137563550 137563734 -2753031 - L1MB3 LINE L1 -2 6181 5993 302 270 43 43 chr10 137564114 137564229 -2752536 - MIR SINE MIR -29 233 119 322 200 0 0 chr10 137564475 137564530 -2752235 + MER5A DNA MER1_type 41 95 -94 355 308 130 0 chr10 137564611 137564796 -2751969 + MIR SINE MIR 35 243 -19 240 305 35 14 chr10 137565066 137565207 -2751558 + L1ME4a LINE L1 4509 4652 -1494 243 188 135 10 chr10 137565741 137565837 -2750928 + L1ME4a LINE L1 5256 5363 -2445 595 260 98 66 chr10 137565926 137566426 -2750339 + L1MC5 LINE L1 7290 7805 -156 326 282 103 60 chr10 137566612 137566891 -2749874 + L1ME4a LINE L1 5612 5878 -243 2569 53 3 3 chr10 137566891 137567194 -2749571 + AluY SINE Alu 1 303 -8 1859 146 14 14 chr10 137567204 137567499 -2749266 + AluJb SINE Alu 1 295 -17 326 282 103 60 chr10 137567499 137567676 -2749089 + L1ME4a LINE L1 5886 6099 -22 2038 148 60 35 chr10 137568605 137569140 -2747625 + MLT2A2 LTR ERVL 1 554 0 291 307 35 18 chr10 137569318 137569432 -2747333 - MIR SINE MIR -56 152 37 236 303 0 0 chr10 137570906 137570972 -2745793 + MIR SINE MIR 191 256 -6 24 32 0 0 chr10 137571025 137571056 -2745709 + AT_rich Low_complexity Low_complexity 1 31 0 2008 148 0 19 chr10 137572531 137572842 -2743923 - AluJb SINE Alu -7 305 1 293 250 26 0 chr10 137572987 137573063 -2743702 - L3 LINE CR1 -402 1175 1098 1990 221 52 83 chr10 137574624 137574678 -2742087 + L1M4c LINE L1 913 967 -5417 2362 108 3 0 chr10 137574678 137574985 -2741780 + AluSq SINE Alu 1 308 -5 1990 221 52 83 chr10 137574985 137575821 -2740944 + L1M4c LINE L1 967 1775 -4609 426 301 148 48 chr10 137575850 137575976 -2740789 - L1M4 LINE L1 -1778 4368 4256 884 229 0 0 chr10 137575976 137576133 -2740632 - FRAM SINE Alu -9 157 1 426 301 148 48 chr10 137576133 137576511 -2740254 - L1M4 LINE L1 -1890 4256 3813 229 322 89 0 chr10 137576758 137576904 -2739861 - L1MEd LINE L1 -4711 1418 1260 315 243 84 48 chr10 137577148 137577272 -2739493 - L1ME LINE L1 -348 5822 5690 1854 122 0 12 chr10 137577272 137577539 -2739226 - AluSx SINE Alu 0 301 38 315 243 84 48 chr10 137577539 137577594 -2739171 - L1ME LINE L1 -480 5690 5638 310 266 14 22 chr10 137577731 137577870 -2738895 - L1ME LINE L1 -929 5430 5293 2278 93 14 0 chr10 137577992 137578281 -2738484 - AluSp SINE Alu -20 293 1 270 267 126 76 chr10 137578287 137578643 -2738122 - L1ME LINE L1 -1091 5055 4682 753 189 57 33 chr10 137578651 137578890 -2737875 - L1MEd LINE L1 -4910 1209 970 1004 147 101 5 chr10 137579025 137579223 -2737542 - Tigger1 DNA MER2_type 0 2418 2202 847 182 0 13 chr10 137579212 137579371 -2737394 - Tigger1 DNA MER2_type -2261 157 1 * 304 285 115 39 chr10 137579718 137579848 -2736917 - L1MEd LINE L1 -5737 382 243 321 327 72 13 chr10 137580517 137580670 -2736095 + MIR3 SINE MIR 15 176 -32 285 165 25 13 chr10 137581282 137581361 -2735404 + (CA)n Simple_repeat Simple_repeat 1 80 0 478 150 30 20 chr10 137581863 137581963 -2734802 - LTR33A LTR ERVL -21 502 402 1808 117 157 17 chr10 137581963 137582314 -2734451 + MSTA LTR MaLR 1 400 -28 1012 131 19 25 chr10 137582331 137582491 -2734274 - AluSg/x SINE Alu 0 312 154 251 150 0 0 chr10 137582491 137582531 -2734234 + MSTA LTR MaLR 389 428 0 423 296 45 28 chr10 137582635 137582814 -2733951 - LTR33A LTR ERVL -341 182 1 239 288 65 20 chr10 137587052 137587205 -2729560 + MER113 DNA MER1_type? 6 165 -356 4890 255 88 42 chr10 137587426 137588537 -2728228 + L1MC4a LINE L1 2201 3259 -4549 905 152 0 0 chr10 137588537 137588669 -2728096 - FLAM_C SINE Alu 0 133 2 4890 255 88 42 chr10 137588669 137588750 -2728015 + L1MC4a LINE L1 3259 3335 -4473 2155 117 47 33 chr10 137588750 137589109 -2727656 + THE1B LTR MaLR 1 364 0 4890 255 88 42 chr10 137589109 137590387 -2726378 + L1MC4a LINE L1 3335 4553 -3255 2267 110 0 17 chr10 137590387 137590688 -2726077 + AluSg SINE Alu 1 296 -14 4890 255 88 42 chr10 137590688 137591010 -2725755 + L1MC4a LINE L1 4553 4859 -2949 222 37 0 0 chr10 137591010 137591037 -2725728 + (CA)n Simple_repeat Simple_repeat 2 28 0 4890 255 88 42 chr10 137591037 137592132 -2724633 + L1MC4a LINE L1 4859 7808 0 781 354 86 36 chr10 137592180 137592892 -2723873 - L3 LINE CR1 -208 1369 623 2142 105 0 3 chr10 137594459 137594754 -2722011 + AluSq SINE Alu 1 294 -19 24 0 0 0 chr10 137594818 137594842 -2721923 + AT_rich Low_complexity Low_complexity 1 24 0 397 284 18 65 chr10 137595724 137595893 -2720872 - MIR SINE MIR -42 220 60 1991 231 11 9 chr10 137596012 137596475 -2720290 + L1MB5 LINE L1 4736 5199 -947 2143 105 8 68 chr10 137596480 137600089 -2716676 + L1PA7 LINE L1 12 3151 -3003 2224 73 10 20 chr10 137600089 137600389 -2716376 + AluY SINE Alu 1 297 -14 2143 105 8 68 chr10 137600389 137603223 -2713542 + L1PA7 LINE L1 3151 6154 0 297 167 64 26 chr10 137603223 137603301 -2713464 + L1MB5 LINE L1 5192 5272 -874 1124 138 0 0 chr10 137603317 137603484 -2713281 - AluSg/x SINE Alu -9 301 135 533 176 81 7 chr10 137603484 137603620 -2713145 + L1MB5 LINE L1 5261 5406 -768 771 190 7 0 chr10 137603631 137603768 -2712997 + FLAM_C SINE Alu 2 139 -4 2077 226 152 13 chr10 137603771 137604383 -2712382 + L1MB5 LINE L1 5435 6131 -43 2035 132 0 0 chr10 137604402 137604705 -2712060 + AluSx SINE Alu 1 303 -9 219 286 31 41 chr10 137604934 137605032 -2711733 - L2 LINE L2 -2 3270 3174 2177 101 3 7 chr10 137605166 137605472 -2711293 + AluSx SINE Alu 1 305 -7 1599 139 64 7 chr10 137605859 137606182 -2710583 - AluSx SINE Alu 0 312 1 2280 92 7 0 chr10 137606189 137606495 -2710270 - AluSg SINE Alu 0 310 3 239 233 96 0 chr10 137606537 137606610 -2710155 + L1MEc LINE L1 37 116 -6280 1910 111 39 0 chr10 137606611 137606891 -2709874 + AluSg SINE Alu 1 291 -19 1365 252 73 72 chr10 137606898 137607297 -2709468 + L1MEc LINE L1 888 1285 -5111 1934 128 14 3 chr10 137607297 137607594 -2709171 + AluSx SINE Alu 1 300 -12 1365 252 73 72 chr10 137607594 137607946 -2708819 + L1MEc LINE L1 1285 1643 -4753 1928 101 50 10 chr10 137607946 137608243 -2708522 + AluSc SINE Alu 1 309 0 1365 252 73 72 chr10 137608243 137608343 -2708422 + L1MEc LINE L1 1643 1741 -4655 966 161 0 17 chr10 137608346 137608520 -2708245 + AluJb SINE Alu 1 171 -141 1499 218 87 45 chr10 137608524 137608640 -2708125 - L1M4 LINE L1 -3389 2757 2647 1797 135 35 3 chr10 137608640 137608929 -2707836 - AluSx SINE Alu -8 304 7 1499 218 87 45 chr10 137608929 137609339 -2707426 - L1M4 LINE L1 -3499 2647 2203 2030 110 3 13 chr10 137609339 137609640 -2707125 - AluSp SINE Alu -15 298 1 1499 218 87 45 chr10 137609640 137609686 -2707079 - L1M4 LINE L1 -3943 2203 2160 954 166 51 0 chr10 137609690 137609865 -2706900 + AluSg/x SINE Alu 113 296 -16 2031 121 3 13 chr10 137609886 137610192 -2706573 + AluJo SINE Alu 1 303 -9 315 284 32 21 chr10 137610509 137610604 -2706161 + L2 LINE L2 3172 3267 -5 1953 142 3 0 chr10 137611286 137611589 -2705176 - AluSx SINE Alu -8 304 1 691 248 0 0 chr10 137611639 137611776 -2704989 + MIR SINE MIR 14 150 -112 2073 94 4 0 chr10 137611814 137612089 -2704676 + AluSq SINE Alu 5 280 -33 216 0 0 0 chr10 137612103 137612127 -2704638 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 323 327 114 15 chr10 137615247 137615641 -2701124 + L2 LINE L2 2302 2734 -580 216 73 0 91 chr10 137615922 137615977 -2700788 + (CTATA)n Simple_repeat Simple_repeat 4 53 0 246 269 87 0 chr10 137616007 137616111 -2700654 + MLT-int LTR MaLR 3 115 -1620 192 215 25 63 chr10 137616607 137616686 -2700079 + L2 LINE L2 3179 3254 -18 287 294 109 30 chr10 137618139 137618340 -2698425 + MLT1L LTR MaLR 176 392 -223 519 243 122 39 chr10 137618525 137618706 -2698059 + MIR SINE MIR 56 251 -11 687 168 228 104 chr10 137618755 137618940 -2697825 - MER46C DNA MER2_type -2 336 175 1748 159 0 28 chr10 137618940 137619260 -2697505 + AluJb SINE Alu 1 311 -1 687 168 228 104 chr10 137619260 137619372 -2697393 - MER46C DNA MER2_type -163 175 2 704 187 79 25 chr10 137619472 137619675 -2697090 - LTR54 LTR ERV1 -5 505 292 437 157 58 74 chr10 137619700 137619821 -2696944 - LTR54 LTR ERV1 -330 180 62 250 235 109 17 chr10 137619927 137620046 -2696719 + MER113 DNA MER1_type? 1 130 -391 860 193 71 61 chr10 137620113 137620136 -2696629 + L1MB1 LINE L1 5033 5054 -1092 1861 168 3 3 chr10 137620136 137620440 -2696325 + AluSx SINE Alu 1 304 -8 2043 89 3 46 chr10 137620442 137620766 -2695999 + AluSg SINE Alu 1 310 0 860 193 71 61 chr10 137620766 137620981 -2695784 + L1MB1 LINE L1 5054 5280 -866 2321 95 0 3 chr10 137620981 137621286 -2695479 + AluSc SINE Alu 1 304 -5 860 193 71 61 chr10 137621286 137621338 -2695427 + L1MB1 LINE L1 5280 5330 -816 827 192 150 0 chr10 137621339 137621532 -2695233 + AluJo SINE Alu 84 305 -7 3148 211 18 69 chr10 137621534 137621696 -2695069 + L1MB1 LINE L1 5325 5494 -695 2135 101 14 0 chr10 137621696 137621983 -2694782 + AluSx SINE Alu 1 291 -21 1323 183 13 47 chr10 137621985 137622302 -2694463 + AluJb SINE Alu 1 306 -6 3148 211 18 69 chr10 137622302 137623029 -2693736 + L1MB1 LINE L1 5495 6171 -18 902 129 0 0 chr10 137623055 137623187 -2693578 + FLAM_C SINE Alu 2 133 0 1509 163 11 25 chr10 137623198 137623480 -2693285 + AluJo SINE Alu 1 278 -34 351 0 0 0 chr10 137623482 137623521 -2693244 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 4473 152 66 72 chr10 137623685 137624762 -2692003 - MER11C LTR ERVK 0 1071 1 966 185 17 12 chr10 137624777 137624950 -2691815 + FAM SINE Alu 2 175 0 182 167 0 0 chr10 137624954 137624984 -2691781 + MIR SINE MIR 137 166 -96 216 0 0 0 chr10 137624999 137625023 -2691742 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2124 78 0 18 chr10 137625031 137625179 -2691586 - AluSg SINE Alu -31 279 137 2739 16 0 3 chr10 137625179 137625491 -2691274 - AluYb8 SINE Alu -7 311 1 2124 78 0 18 chr10 137625491 137625626 -2691139 - AluSg SINE Alu -173 137 1 282 178 30 10 chr10 137625841 137625911 -2690854 + MIR SINE MIR 110 181 -27 2090 162 74 2 chr10 137626355 137626749 -2690016 - MSTB LTR MaLR -4 422 1 208 340 70 0 chr10 137626758 137626858 -2689907 + L2 LINE L2 2972 3078 -235 555 117 53 11 chr10 137626931 137627025 -2689740 + MER4A LTR ERV1 1 98 -566 2083 98 17 22 chr10 137627025 137627372 -2689393 + MER4A LTR ERV1 261 664 0 433 282 106 0 chr10 137627507 137627649 -2689116 - MIR SINE MIR -71 191 35 2235 58 17 10 chr10 137628927 137629222 -2687543 - AluSp SINE Alu -16 297 1 961 123 0 0 chr10 137629356 137629494 -2687271 + AluSq/x SINE Alu 1 138 -175 584 105 0 23 chr10 137629594 137629680 -2687085 - AluS SINE Alu -228 85 2 2130 122 0 0 chr10 137629815 137630118 -2686647 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 137630267 137630288 -2686477 + AT_rich Low_complexity Low_complexity 1 21 0 1528 175 7 10 chr10 137631024 137631315 -2685450 + AluJb SINE Alu 1 290 -22 2367 100 51 14 chr10 137631580 137631891 -2684874 + THE1B LTR MaLR 1 328 -36 2283 101 3 0 chr10 137631891 137632199 -2684566 - AluSp SINE Alu -4 309 1 2367 100 51 14 chr10 137632199 137632238 -2684527 + THE1B LTR MaLR 328 364 0 917 133 0 15 chr10 137634049 137634184 -2682581 + FLAM_C SINE Alu 1 133 0 234 0 0 0 chr10 137636724 137636750 -2680015 + (TC)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr10 137636749 137636774 -2679991 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1255 95 0 0 chr10 137636982 137637151 -2679614 + AluSg/x SINE Alu 139 307 -5 1111 155 6 0 chr10 137637744 137637925 -2678840 + MER39B LTR ERV1 6 187 -466 859 135 31 83 chr10 137638061 137638092 -2678673 + MER39B LTR ERV1 226 257 -396 1997 135 3 3 chr10 137638092 137638395 -2678370 + AluSx SINE Alu 1 303 -9 859 135 31 83 chr10 137638395 137638555 -2678210 + MER39B LTR ERV1 257 407 -246 1358 145 44 12 chr10 137639104 137639353 -2677412 + MER39B LTR ERV1 397 653 0 2420 66 0 0 chr10 137639481 137639786 -2676979 + AluY SINE Alu 1 305 -6 2348 73 3 0 chr10 137640121 137640424 -2676341 + AluSp SINE Alu 1 304 -9 1321 158 92 60 chr10 137640548 137640771 -2675994 - L1MD2 LINE L1 -3 6356 6119 1439 176 3 36 chr10 137640771 137641077 -2675688 - AluJo SINE Alu -16 296 1 1321 158 92 60 chr10 137641077 137641169 -2675596 - L1MD2 LINE L1 -240 6119 6031 605 197 146 0 chr10 137641290 137641468 -2675297 - Charlie5 DNA MER1_type -10 2602 2399 193 307 216 0 chr10 137641498 137641586 -2675179 - L2 LINE L2 -23 3290 3184 215 191 0 48 chr10 137643227 137643290 -2673475 + (CGG)n Simple_repeat Simple_repeat 2 61 0 602 246 65 52 chr10 137644276 137644508 -2672257 + MIR SINE MIR 28 262 0 1859 152 0 3 chr10 137644552 137644854 -2671911 - AluJb SINE Alu -11 301 1 1842 146 3 7 chr10 137644875 137645177 -2671588 - AluJb SINE Alu -11 301 1 2141 88 23 36 chr10 137645666 137645973 -2670792 - AluSx SINE Alu -9 303 1 2468 74 0 10 chr10 137646176 137646485 -2670280 + AluY SINE Alu 1 306 -5 1695 138 63 4 chr10 137646491 137646759 -2670006 + AluJo SINE Alu 11 294 -18 352 246 143 26 chr10 137647510 137647852 -2668913 - L1ME4a LINE L1 -201 5920 5483 1189 143 178 16 chr10 137647873 137648131 -2668634 + AluJo SINE Alu 1 300 -2 861 205 105 32 chr10 137648180 137648616 -2668149 - L1ME2 LINE L1 -7 6157 5662 524 225 136 12 chr10 137648690 137648859 -2667906 - MLT1J2 LTR MaLR -257 193 4 800 195 26 7 chr10 137650355 137650509 -2666256 - FRAM SINE Alu -9 157 1 2109 128 0 3 chr10 137650520 137650809 -2665956 - AluSx SINE Alu -16 296 9 5243 55 2 2 chr10 137651109 137651749 -2665016 - L1PA8 LINE L1 0 6172 5533 2205 107 3 0 chr10 137652199 137652508 -2664257 + AluSx SINE Alu 1 312 0 2035 98 39 11 chr10 137652624 137652909 -2663856 - AluSc SINE Alu -16 293 1 1190 175 112 30 chr10 137654578 137654846 -2661919 + AluJo SINE Alu 1 290 -12 1652 178 25 4 chr10 137654964 137655245 -2661520 - AluJb SINE Alu -21 291 5 243 0 0 0 chr10 137655252 137655279 -2661486 + (T)n Simple_repeat Simple_repeat 1 27 0 1663 155 34 31 chr10 137655603 137655894 -2660871 + AluJo SINE Alu 5 296 -16 1678 128 0 0 chr10 137656050 137656285 -2660480 + AluSg/x SINE Alu 73 307 -5 22 0 0 0 chr10 137656752 137656774 -2659991 + AT_rich Low_complexity Low_complexity 1 22 0 2266 115 0 6 chr10 137656775 137657088 -2659677 + AluY SINE Alu 1 311 0 2429 81 0 0 chr10 137657748 137658044 -2658721 - AluSg SINE Alu -14 296 1 3123 68 0 12 chr10 137658186 137658597 -2658168 - L1PA6 LINE L1 0 6154 5749 13843 132 26 43 chr10 137658597 137658843 -2657922 - L1P LINE L1 -3782 2364 2115 2284 116 7 0 chr10 137658843 137659137 -2657628 - AluSx SINE Alu -16 296 1 13843 132 26 43 chr10 137659137 137661285 -2655480 - L1P LINE L1 -4031 2115 11 780 278 185 21 chr10 137661562 137661790 -2654975 - L2 LINE L2 -8 3305 3116 890 206 0 12 chr10 137661790 137661950 -2654815 - FRAM SINE Alu -4 162 5 780 278 185 21 chr10 137661950 137662829 -2653936 - L2 LINE L2 -197 3116 1907 1620 200 21 48 chr10 137662892 137663267 -2653498 - MLT1A1 LTR MaLR 0 365 1 344 243 117 9 chr10 137663267 137663378 -2653387 + MIR SINE MIR 85 207 -55 271 246 0 0 chr10 137663396 137663457 -2653308 + MIR SINE MIR 176 236 -26 345 324 9 0 chr10 137663778 137663886 -2652879 + MIR SINE MIR 6 114 -148 1757 182 65 113 chr10 137663888 137664312 -2652453 - MLT2B3 LTR ERVL 0 554 164 219 36 0 0 chr10 137664312 137664340 -2652425 + (C)n Simple_repeat Simple_repeat 1 28 0 1757 182 65 113 chr10 137664340 137664497 -2652268 - MLT2B3 LTR ERVL -390 164 1 26 0 0 0 chr10 137664678 137664704 -2652061 + AT_rich Low_complexity Low_complexity 1 26 0 1280 92 6 0 chr10 137665034 137665198 -2651567 - AluSq SINE Alu -15 298 134 30 59 0 0 chr10 137665898 137665949 -2650816 + AT_rich Low_complexity Low_complexity 1 51 0 358 313 90 0 chr10 137667997 137668141 -2648624 - MIR3 SINE MIR -2 206 50 2019 113 0 20 chr10 137668799 137669091 -2647674 - AluSp SINE Alu -17 296 11 32 43 0 0 chr10 137669853 137669899 -2646866 + AT_rich Low_complexity Low_complexity 1 46 0 2271 99 10 0 chr10 137669961 137670254 -2646511 + AluSx SINE Alu 1 296 -16 705 217 0 63 chr10 137672815 137672990 -2643775 - FRAM SINE Alu -21 155 1 26 0 0 0 chr10 137673832 137673858 -2642907 + AT_rich Low_complexity Low_complexity 1 26 0 2265 72 0 10 chr10 137675272 137675565 -2641200 - AluY SINE Alu -21 290 1 23 0 0 0 chr10 137675977 137676000 -2640765 + AT_rich Low_complexity Low_complexity 1 23 0 2089 92 46 3 chr10 137677670 137677984 -2638781 + AluSc SINE Alu 1 309 0 1896 179 3 0 chr10 137678502 137678799 -2637966 + AluJb SINE Alu 1 298 -14 2171 111 7 3 chr10 137679478 137679767 -2636998 + AluSx SINE Alu 1 290 -22 954 201 5 55 chr10 137681256 137681455 -2635310 + MER58A DNA MER1_type 36 224 0 2400 72 13 10 chr10 137682931 137683238 -2633527 - AluSq SINE Alu -5 308 1 375 121 0 0 chr10 137683553 137683611 -2633154 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 368 347 46 20 chr10 137684247 137684443 -2632322 - MIR SINE MIR -15 247 47 1943 136 16 35 chr10 137685062 137685372 -2631393 - AluSx SINE Alu -8 304 1 2130 99 7 3 chr10 137685540 137685822 -2630943 - AluSx SINE Alu -29 283 1 875 115 25 0 chr10 137685834 137685956 -2630809 - AluSq/x SINE Alu -187 125 1 1369 142 8 6 chr10 137686914 137687161 -2629604 - AluJb SINE Alu -16 296 1 1823 151 10 16 chr10 137690076 137690380 -2626385 - AluJb SINE Alu -10 302 1 1227 144 52 13 chr10 137690509 137690738 -2626027 + MER39 LTR ERV1 462 699 -8 1890 167 27 0 chr10 137691197 137691496 -2625269 + AluJb SINE Alu 1 307 -5 968 190 94 7 chr10 137691973 137692333 -2624432 - MER39 LTR ERV1 0 707 287 3122 134 60 18 chr10 137692351 137692919 -2623846 - LTR38B LTR ERV1 -18 592 1 947 202 94 43 chr10 137692919 137692961 -2623804 - MER39 LTR ERV1 -416 291 253 2399 80 3 0 chr10 137692961 137693263 -2623502 - AluSq SINE Alu -10 303 1 947 202 94 43 chr10 137693263 137693497 -2623268 - MER39 LTR ERV1 -454 253 1 2290 237 127 4 chr10 137694071 137694923 -2621842 - MER45B DNA AcHobo -54 986 1 773 254 75 0 chr10 137695151 137695352 -2621413 - MIR SINE MIR -37 225 10 2331 46 0 0 chr10 137695952 137696261 -2620504 - AluY SINE Alu 0 309 1 384 194 83 9 chr10 137696263 137696371 -2620394 - MER115 DNA AcHobo -69 624 509 1261 264 205 16 chr10 137697985 137698595 -2618170 - L1MC3 LINE L1 0 7785 7037 1823 144 47 7 chr10 137698595 137698893 -2617872 - AluJo SINE Alu -2 310 1 1261 264 205 16 chr10 137698893 137698949 -2617816 - L1MC3 LINE L1 -748 7037 6993 846 259 112 6 chr10 137700075 137700388 -2616377 - L1MD2 LINE L1 -21 6338 5993 200 261 0 29 chr10 137700598 137700667 -2616098 + C-rich Low_complexity Low_complexity 6 72 0 410 135 0 21 chr10 137700698 137700794 -2615971 + (TCTCTG)n Simple_repeat Simple_repeat 6 99 0 300 182 34 0 chr10 137701292 137701380 -2615385 + GA-rich Low_complexity Low_complexity 4 94 0 445 274 36 10 chr10 137702812 137703073 -2613692 - MLT1H LTR MaLR -195 354 40 212 255 0 0 chr10 137703133 137703180 -2613585 + (TG)n Simple_repeat Simple_repeat 1 47 0 327 350 0 19 chr10 137703180 137703283 -2613482 + L1MC4 LINE L1 6595 6695 -1347 301 415 0 0 chr10 137703194 137703300 -2613465 - L1MC4 LINE L1 -1340 6702 6597 * 2219 112 3 0 chr10 137705106 137705410 -2611355 + AluSx SINE Alu 1 305 -7 2304 107 0 0 chr10 137706082 137706390 -2610375 + AluSx SINE Alu 1 308 -4 186 303 101 37 chr10 137706432 137706541 -2610224 + MER5B DNA MER1_type 1 116 -62 428 282 9 0 chr10 137708275 137708385 -2608380 + MER81 DNA DNA 1 111 -3 264 333 0 0 chr10 137708390 137708501 -2608264 + G-rich Low_complexity Low_complexity 1 111 0 * 310 337 0 0 chr10 137708428 137708600 -2608165 + (AGGTG)n Simple_repeat Simple_repeat 5 176 0 1709 146 58 7 chr10 137708784 137709059 -2607706 + AluJb SINE Alu 1 289 -23 1926 103 37 0 chr10 137709089 137709386 -2607379 - AluSx SINE Alu 0 307 1 283 192 60 36 chr10 137709495 137709662 -2607103 + (CACAG)n Simple_repeat Simple_repeat 5 175 0 272 106 0 47 chr10 137710245 137710330 -2606435 + (CCCCCT)n Simple_repeat Simple_repeat 1 81 0 197 19 115 39 chr10 137710388 137710440 -2606325 + (CCCG)n Simple_repeat Simple_repeat 2 57 0 212 245 189 28 chr10 137711266 137711372 -2605393 - MIR SINE MIR -61 147 25 233 303 110 18 chr10 137712638 137712747 -2604018 - MIR SINE MIR -66 196 78 254 363 64 18 chr10 137713091 137713262 -2603503 + MIR SINE MIR 6 184 -78 493 188 7 10 chr10 137713655 137713961 -2602804 + (CA)n Simple_repeat Simple_repeat 1 305 0 439 143 42 6 chr10 137713988 137714156 -2602609 + (CA)n Simple_repeat Simple_repeat 1 174 0 365 159 7 22 chr10 137714224 137714362 -2602403 + (CA)n Simple_repeat Simple_repeat 1 136 0 223 290 76 48 chr10 137714574 137714719 -2602046 + L3 LINE CR1 1346 1494 -83 599 349 88 0 chr10 137714873 137715157 -2601608 + L3 LINE CR1 1110 1418 -159 292 299 88 7 chr10 137715703 137715840 -2600925 - LTR16A LTR ERVL -15 435 288 1431 246 89 25 chr10 137716911 137717350 -2599415 - MLT1C LTR MaLR 0 467 1 1207 183 24 63 chr10 137717491 137717973 -2598792 + MER4A LTR ERV1 1 420 -186 526 158 196 8 chr10 137718000 137718133 -2598632 + MER4C LTR ERV1 281 438 -27 2252 148 50 3 chr10 137719815 137720194 -2596571 - MER48 LTR ERV1 -1 397 1 251 250 31 0 chr10 137721283 137721347 -2595418 + MER5B DNA MER1_type 5 70 -108 371 280 45 32 chr10 137721618 137721775 -2594990 + MER5A DNA MER1_type 1 159 -30 369 376 109 45 chr10 137722505 137722925 -2593840 + L1MC4a LINE L1 5525 5971 -1837 330 318 118 41 chr10 137722910 137723080 -2593685 + L1ME4a LINE L1 5939 6121 0 * 2319 84 3 3 chr10 137723125 137723434 -2593331 - AluSq SINE Alu -4 309 1 3261 193 22 8 chr10 137723849 137724411 -2592354 - L1MB3 LINE L1 0 6183 5610 1625 174 44 20 chr10 137724411 137724709 -2592056 - AluJb SINE Alu -2 310 6 3261 193 22 8 chr10 137724709 137724777 -2591988 - L1MB3 LINE L1 -573 5610 5544 30 0 0 0 chr10 137725351 137725381 -2591384 + AT_rich Low_complexity Low_complexity 1 30 0 378 331 15 8 chr10 137725435 137725568 -2591197 - MIR3 SINE MIR -16 192 59 358 274 28 0 chr10 137725692 137725798 -2590967 - MIR SINE MIR -77 185 77 2387 171 18 34 chr10 137725882 137726251 -2590514 + MER57B LTR ERV1 1 363 -71 2327 92 0 3 chr10 137726251 137726557 -2590208 - AluSq SINE Alu -8 305 1 2387 171 18 34 chr10 137726557 137726626 -2590139 + MER57B LTR ERV1 363 432 -2 192 235 0 0 chr10 137727717 137727785 -2588980 + (TG)n Simple_repeat Simple_repeat 2 69 0 241 292 25 56 chr10 137728139 137728300 -2588465 + LTR33 LTR ERVL 23 178 -343 2663 138 25 10 chr10 137728475 137728880 -2587885 + LTR57 LTR ERVL 1 411 0 2312 88 10 0 chr10 137729728 137730034 -2586731 - AluSc SINE Alu 0 309 1 4352 272 117 26 chr10 137730322 137731759 -2585006 - L1MC3 LINE L1 0 7785 6115 1932 98 38 24 chr10 137731759 137732046 -2584719 + AluSg SINE Alu 1 291 -19 4352 272 117 26 chr10 137732046 137732628 -2584137 - L1MC3 LINE L1 -1670 6115 5587 365 348 82 14 chr10 137732895 137733102 -2583663 - MIR SINE MIR -41 221 1 214 311 61 61 chr10 137733154 137733366 -2583399 - L2 LINE L2 -557 2757 2546 508 156 11 0 chr10 137733485 137733575 -2583190 - MLT1B LTR MaLR -6 384 294 * 786 188 0 13 chr10 137733571 137733725 -2583040 - MLT1B LTR MaLR -238 152 1 352 267 186 0 chr10 137733868 137734040 -2582725 + MLT1G1 LTR MaLR 40 243 -352 1139 255 54 9 chr10 137734044 137734377 -2582388 - MER87 LTR ERV1 0 541 194 593 239 21 14 chr10 137734469 137734611 -2582154 + MLT1G3 LTR MaLR 163 305 -225 350 205 79 63 chr10 137734618 137734745 -2582020 + MLT1G3 LTR MaLR 415 543 -6 1750 164 8 44 chr10 137735923 137736290 -2580475 - MER4D LTR ERV1 -3 900 547 630 279 35 10 chr10 137736258 137736459 -2580306 - MER4E LTR ERV1 -571 208 3 * 416 266 189 21 chr10 137737664 137738044 -2578721 - MLT1D LTR MaLR -17 488 45 366 318 130 38 chr10 137740438 137740677 -2576088 + L1ME4a LINE L1 5831 6091 -30 846 244 125 23 chr10 137741582 137742036 -2574729 - MLT1E3 LTR MaLR 0 624 113 285 390 87 4 chr10 137742260 137742501 -2574264 + L3 LINE CR1 1316 1576 -1 184 304 25 51 chr10 137743238 137743317 -2573448 + MIR SINE MIR 83 159 -103 998 207 120 30 chr10 137743865 137744165 -2572600 - L1ME1 LINE L1 -4 6162 5836 * 4144 221 70 17 chr10 137744158 137745390 -2571375 - L1ME1 LINE L1 -1024 5122 3826 234 0 0 0 chr10 137747512 137747538 -2569227 + (TC)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr10 137747537 137747562 -2569203 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1255 95 0 0 chr10 137747770 137747939 -2568826 + AluSg/x SINE Alu 139 307 -5 1111 155 6 0 chr10 137748532 137748713 -2568052 + MER39B LTR ERV1 6 187 -466 859 135 31 83 chr10 137748849 137748880 -2567885 + MER39B LTR ERV1 226 257 -396 1997 135 3 3 chr10 137748880 137749183 -2567582 + AluSx SINE Alu 1 303 -9 859 135 31 83 chr10 137749183 137749343 -2567422 + MER39B LTR ERV1 257 407 -246 1358 145 44 12 chr10 137749892 137750141 -2566624 + MER39B LTR ERV1 397 653 0 2420 66 0 0 chr10 137750269 137750574 -2566191 + AluY SINE Alu 1 305 -6 2348 73 3 0 chr10 137750909 137751212 -2565553 + AluSp SINE Alu 1 304 -9 1321 158 92 60 chr10 137751336 137751559 -2565206 - L1MD2 LINE L1 -3 6356 6119 1439 176 3 36 chr10 137751559 137751865 -2564900 - AluJo SINE Alu -16 296 1 1321 158 92 60 chr10 137751865 137751957 -2564808 - L1MD2 LINE L1 -240 6119 6031 605 197 146 0 chr10 137752078 137752256 -2564509 - Charlie5 DNA MER1_type -10 2602 2399 193 307 216 0 chr10 137752286 137752374 -2564391 - L2 LINE L2 -23 3290 3184 215 191 0 48 chr10 137754015 137754078 -2562687 + (CGG)n Simple_repeat Simple_repeat 2 61 0 700 246 65 52 chr10 137755065 137755297 -2561468 + MIR SINE MIR 28 262 0 1751 152 0 3 chr10 137755341 137755643 -2561122 - AluJb SINE Alu -11 301 1 1997 111 10 3 chr10 137755664 137755961 -2560804 - AluSg SINE Alu -11 299 1 1200 175 112 30 chr10 137757630 137757898 -2558867 + AluJo SINE Alu 1 290 -12 1543 178 25 4 chr10 137758016 137758297 -2558468 - AluJb SINE Alu -21 291 5 243 0 0 0 chr10 137758304 137758331 -2558434 + (T)n Simple_repeat Simple_repeat 1 27 0 1555 168 34 17 chr10 137758655 137758946 -2557819 + AluJo SINE Alu 5 300 -12 1591 128 0 0 chr10 137759102 137759337 -2557428 + AluSg/x SINE Alu 71 305 -5 22 0 0 0 chr10 137759804 137759826 -2556939 + AT_rich Low_complexity Low_complexity 1 22 0 2139 115 0 6 chr10 137759827 137760140 -2556625 + AluY SINE Alu 1 311 0 2295 84 0 0 chr10 137760797 137761096 -2555669 - AluSg SINE Alu -11 299 1 3118 68 0 12 chr10 137761238 137761649 -2555116 - L1PA6 LINE L1 0 6154 5749 13905 132 26 43 chr10 137761649 137761895 -2554870 - L1P LINE L1 -3782 2364 2115 2153 116 7 0 chr10 137761895 137762189 -2554576 - AluSx SINE Alu -16 296 1 13905 132 26 43 chr10 137762189 137764337 -2552428 - L1P LINE L1 -4031 2115 11 1095 270 210 23 chr10 137764614 137764842 -2551923 - L2 LINE L2 -8 3305 3121 898 206 0 12 chr10 137764842 137765002 -2551763 - FRAM SINE Alu -4 162 5 1095 270 210 23 chr10 137765002 137765881 -2550884 - L2 LINE L2 -192 3121 1907 1623 200 21 48 chr10 137765944 137766319 -2550446 - MLT1A1 LTR MaLR 0 365 1 392 243 117 9 chr10 137766319 137766430 -2550335 + MIR SINE MIR 85 207 -55 300 246 0 0 chr10 137766448 137766509 -2550256 + MIR SINE MIR 176 236 -26 377 324 9 0 chr10 137766830 137766938 -2549827 + MIR SINE MIR 6 114 -148 1353 189 96 64 chr10 137766940 137767363 -2549402 - MLT2B2 LTR ERVL 0 515 158 3298 246 112 20 chr10 137767465 137769050 -2547715 - L1MEc LINE L1 -2452 3763 2071 366 23 0 0 chr10 137769050 137769093 -2547672 + (ATG)n Simple_repeat Simple_repeat 2 44 0 3298 246 112 20 chr10 137769093 137769114 -2547651 - L1MEc LINE L1 -4144 2071 2053 1253 249 63 54 chr10 137769129 137769763 -2547002 - L1MEc LINE L1 -4654 1742 1103 1103 126 0 12 chr10 137769867 137770034 -2546731 - AluSq SINE Alu -53 260 96 2300 263 67 52 chr10 137770036 137771085 -2545680 - L1MEc LINE L1 -5296 1100 37 557 317 75 22 chr10 137771660 137771887 -2544878 + MIR SINE MIR 14 252 -10 278 300 194 12 chr10 137771993 137772153 -2544612 + MER5A DNA MER1_type 1 189 0 2142 106 0 7 chr10 137774175 137774478 -2542287 - AluSx SINE Alu -11 301 1 902 229 10 6 chr10 137774496 137774705 -2542060 + MER51A LTR ERV1 427 640 0 1918 108 67 197 chr10 137774828 137775335 -2541430 - MLT2A2 LTR ERVL -10 443 3 2095 206 75 116 chr10 137775452 137775781 -2540984 - L1MC5 LINE L1 -279 7682 7341 222 118 0 0 chr10 137775781 137775815 -2540950 + (TG)n Simple_repeat Simple_repeat 2 35 0 2095 206 75 116 chr10 137775815 137776576 -2540189 - L1MC5 LINE L1 -620 7341 6637 1311 122 0 15 chr10 137776622 137776818 -2539947 + AluSx SINE Alu 1 193 -119 342 333 36 46 chr10 137776838 137777033 -2539732 - L1MC4a LINE L1 -1213 6595 6403 1762 145 14 3 chr10 137777235 137777531 -2539234 - AluSx SINE Alu -13 299 1 499 286 128 19 chr10 137777560 137777990 -2538775 - L1MC4a LINE L1 -1631 6177 5701 241 324 21 35 chr10 137778099 137778241 -2538524 - L1MC5 LINE L1 -783 7178 7039 779 271 57 4 chr10 137778393 137778640 -2538125 - L1MD3 LINE L1 -5 7990 7731 281 244 12 0 chr10 137778738 137778824 -2537941 + (TG)n Simple_repeat Simple_repeat 2 88 0 782 224 32 11 chr10 137778829 137779084 -2537681 - L1MC5 LINE L1 -1003 6805 6543 287 349 18 0 chr10 137779194 137779303 -2537462 - MLT1I LTR MaLR -3 406 296 451 250 62 9 chr10 137779627 137779739 -2537026 - MLT1C LTR MaLR 0 467 350 1774 235 24 15 chr10 137780240 137780703 -2536062 - MLT1C LTR MaLR 0 467 1 216 352 112 8 chr10 137782038 137782082 -2534683 + L2 LINE L2 3134 3172 -100 381 22 0 0 chr10 137782082 137782128 -2534637 + (TG)n Simple_repeat Simple_repeat 2 47 0 216 352 112 8 chr10 137782128 137782208 -2534557 + L2 LINE L2 3172 3271 -1 267 103 224 0 chr10 137784008 137784066 -2532699 - MLT1C LTR MaLR -387 80 10 206 246 33 33 chr10 137784660 137784721 -2532044 + L2 LINE L2 3212 3272 0 540 318 72 19 chr10 137784940 137785258 -2531507 - L1MC5 LINE L1 -1910 5898 5564 215 291 94 17 chr10 137785696 137785813 -2530952 - MIR SINE MIR -116 146 21 1253 238 63 47 chr10 137786694 137786965 -2529800 - MLT1C LTR MaLR -9 458 176 2971 112 30 5 chr10 137786965 137787402 -2529363 - MER83 LTR ERV1 0 448 1 1253 238 63 47 chr10 137787402 137787576 -2529189 - MLT1C LTR MaLR -291 176 6 871 182 0 12 chr10 137788929 137789094 -2527671 - FRAM SINE Alu -20 156 1 495 269 33 69 chr10 137789098 137789343 -2527422 - HAL1 LINE L1 -2 2505 2270 807 218 73 29 chr10 137789354 137789629 -2527136 - HAL1 LINE L1 -1219 1288 1002 935 188 84 136 chr10 137789968 137790373 -2526392 - MLT1B LTR MaLR 0 390 7 1872 146 0 13 chr10 137790905 137791263 -2525502 - AluSx SINE Alu 0 312 1 437 288 119 58 chr10 137792159 137792454 -2524311 - HAL1 LINE L1 -2193 314 2 2599 113 8 0 chr10 137794529 137794884 -2521881 - THE1B LTR MaLR -6 358 1 279 278 176 49 chr10 137795174 137795379 -2521386 + MIR SINE MIR 3 233 -29 183 290 108 0 chr10 137796333 137796426 -2520339 - MIR SINE MIR -41 221 119 522 227 9 0 chr10 137796598 137796708 -2520057 - MER3 DNA MER1_type 0 209 99 22 0 0 0 chr10 137796714 137796736 -2520029 + AT_rich Low_complexity Low_complexity 1 22 0 602 38 0 0 chr10 137796736 137796815 -2519950 - L1PA3 LINE L1 0 6155 6077 228 333 11 11 chr10 137796825 137796918 -2519847 - MER3 DNA MER1_type -116 93 1 1852 203 39 47 chr10 137797292 137797799 -2518966 - MLT1D LTR MaLR 0 505 3 330 274 167 37 chr10 137797852 137798097 -2518668 - MLT1H LTR MaLR -12 537 261 269 316 62 46 chr10 137798351 137798603 -2518162 + MIR SINE MIR 5 261 -1 274 331 70 14 chr10 137800413 137800555 -2516210 + L2 LINE L2 3122 3271 -1 488 273 133 0 chr10 137800980 137801145 -2515620 + MER63A DNA MER1_type 5 191 -19 350 227 10 41 chr10 137801746 137801843 -2514922 - MER58 DNA MER1_type -247 94 1 261 282 149 80 chr10 137801973 137802056 -2514709 + MARNA DNA Mariner 276 352 -234 1563 130 3 53 chr10 137802056 137802340 -2514425 - AluSx SINE Alu 0 312 43 261 282 149 80 chr10 137802340 137802518 -2514247 + MARNA DNA Mariner 352 555 -31 1200 224 111 48 chr10 137804106 137804540 -2512225 - MLT1C LTR MaLR 0 467 7 26 0 0 0 chr10 137804979 137805005 -2511760 + AT_rich Low_complexity Low_complexity 1 26 0 398 278 185 0 chr10 137805528 137805690 -2511075 + L1ME LINE L1 5627 5818 -303 493 274 188 27 chr10 137805731 137805954 -2510811 + MIR SINE MIR 2 260 -2 373 323 75 13 chr10 137806386 137806494 -2510271 - L2 LINE L2 -232 3040 2940 2214 209 22 7 chr10 137806494 137806948 -2509817 + MER65C LTR ERV1 1 461 0 373 323 75 13 chr10 137806948 137807233 -2509532 - L2 LINE L2 -332 2940 2552 266 304 72 58 chr10 137807827 137808103 -2508662 - L1M4 LINE L1 -3627 2519 2240 1119 256 47 44 chr10 137809059 137809446 -2507319 + MLT1B LTR MaLR 1 388 -2 2187 84 0 34 chr10 137809576 137809896 -2506869 - AluY SINE Alu -2 309 1 1944 164 15 26 chr10 137809938 137810279 -2506486 + MER1B DNA MER1_type 1 337 0 390 289 107 13 chr10 137810752 137810911 -2505854 - MIR SINE MIR -24 238 65 656 151 40 16 chr10 137811501 137811627 -2505138 - MER20 DNA MER1_type -57 162 34 404 272 130 57 chr10 137812055 137812423 -2504342 - MLT1J1 LTR MaLR -51 395 1 2444 66 0 0 chr10 137813876 137814178 -2502587 + AluY SINE Alu 1 302 -9 530 330 105 24 chr10 137815229 137815599 -2501166 + L2 LINE L2 2004 2403 -911 218 297 221 9 chr10 137815576 137815798 -2500967 + L2 LINE L2 3044 3312 -1 * 264 219 176 40 chr10 137816708 137816931 -2499834 + MLT1G LTR MaLR 316 590 0 189 121 0 0 chr10 137817600 137817633 -2499132 + (TG)n Simple_repeat Simple_repeat 1 33 0 2265 57 0 27 chr10 137817738 137818035 -2498730 + AluY SINE Alu 16 304 -7 525 288 149 32 chr10 137818440 137818936 -2497829 + MLT1H1 LTR MaLR 2 555 0 3691 111 0 6 chr10 137820793 137821307 -2495458 + MER9 LTR ERVK 1 511 0 46246 68 11 19 chr10 137821307 137827270 -2489495 + HERVK9 LTR ERVK 1 5916 0 3480 101 32 18 chr10 137827270 137827774 -2488991 + MER9 LTR ERVK 1 511 0 509 278 111 52 chr10 137828442 137828849 -2487916 + MLT1H LTR MaLR 119 549 0 2220 86 13 0 chr10 137829461 137829762 -2487003 + AluY SINE Alu 1 305 -6 206 263 0 68 chr10 137831150 137831340 -2485425 + (CCTG)n Simple_repeat Simple_repeat 3 179 0 779 273 33 60 chr10 137832164 137832683 -2484082 - L1M4c LINE L1 -4543 2416 1921 293 283 0 33 chr10 137832675 137832795 -2483970 - L1M4c LINE L1 -6715 144 29 * 1841 114 0 40 chr10 137832832 137833131 -2483634 - AluSx SINE Alu -3 309 23 242 254 0 32 chr10 137833795 137833858 -2482907 - MLT1J1 LTR MaLR -120 326 266 395 37 0 19 chr10 137834652 137834706 -2482059 + (CA)n Simple_repeat Simple_repeat 2 54 0 308 312 19 32 chr10 137834851 137835008 -2481757 + MER112 DNA MER1_type 3 157 -103 2267 138 88 18 chr10 137835869 137836269 -2480496 - MSTA LTR MaLR 0 428 1 331 361 73 0 chr10 137836363 137836554 -2480211 + L2 LINE L2 1771 1975 -1339 1749 281 154 24 chr10 137836875 137837878 -2478887 - L1MCc LINE L1 -4892 1531 398 480 279 61 5 chr10 137837909 137838106 -2478659 - L1MCc LINE L1 -6193 230 23 1158 213 122 21 chr10 137838375 137838760 -2478005 - MSTC LTR MaLR -4 424 1 2092 110 3 19 chr10 137839283 137839616 -2477149 - AluSq SINE Alu 0 313 1 2198 109 0 10 chr10 137840138 137840449 -2476316 + AluSx SINE Alu 2 309 -3 314 264 40 48 chr10 137840504 137840629 -2476136 + L1M3 LINE L1 3866 3989 -2157 302 303 41 16 chr10 137840766 137840888 -2475877 + L1M3 LINE L1 4219 4343 -1803 941 291 110 42 chr10 137841471 137842715 -2474050 + L1M3 LINE L1 4340 5680 -500 404 241 68 0 chr10 137842758 137842920 -2473845 + L1ME3A LINE L1 5989 6161 -9 593 224 20 0 chr10 137842979 137843131 -2473634 + L1MA10 LINE L1 6177 6331 -3 3808 114 9 18 chr10 137843174 137843553 -2473212 - L1PA16 LINE L1 -6 6160 5779 1986 141 3 0 chr10 137843553 137843852 -2472913 - AluSq SINE Alu -13 300 1 3808 114 9 18 chr10 137843852 137844030 -2472735 - L1PA16 LINE L1 -387 5779 5606 225 0 0 0 chr10 137844030 137844055 -2472710 + (TTA)n Simple_repeat Simple_repeat 3 27 0 3808 114 9 18 chr10 137844055 137844067 -2472698 - L1PA16 LINE L1 -560 5606 5595 34283 30 0 1 chr10 137844067 137845870 -2470895 - L1PA3 LINE L1 -30 6125 4321 2856 23 0 0 chr10 137845870 137846178 -2470587 + AluYb8 SINE Alu 1 308 -10 34283 30 0 1 chr10 137846178 137849742 -2467023 - L1PA3 LINE L1 -1834 4321 765 2348 149 7 5 chr10 137849742 137850354 -2466411 - L1PA16 LINE L1 -563 5603 4988 560 333 26 13 chr10 137850358 137850586 -2466179 + L1ME LINE L1 3030 3260 -2886 500 272 123 42 chr10 137850651 137851100 -2465665 + L1ME LINE L1 4747 5231 -915 459 258 133 31 chr10 137851105 137851229 -2465536 + L1ME LINE L1 5273 5383 -787 8346 58 4 4 chr10 137851229 137852236 -2464529 + LTR13 LTR ERVK 1 1007 0 459 258 133 31 chr10 137852236 137852305 -2464460 + L1ME LINE L1 5383 5444 -726 2493 125 70 2 chr10 137852305 137852704 -2464061 - MSTB LTR MaLR 0 426 1 459 258 133 31 chr10 137852704 137852790 -2463975 + L1ME LINE L1 5444 5584 -586 1415 221 92 8 chr10 137853060 137853418 -2463347 + MSTD LTR MaLR 1 388 -8 1870 213 15 2 chr10 137853424 137853828 -2462937 + MSTD-int LTR MaLR 2 410 -1325 359 222 33 11 chr10 137854271 137854361 -2462404 + MER96 DNA MER1_type? 1 92 -83 352 252 19 28 chr10 137854379 137854486 -2462279 + MLT1K LTR MaLR 413 518 -70 548 165 21 0 chr10 137855271 137855368 -2461397 + MLT1D LTR MaLR 1 99 -406 729 208 142 38 chr10 137855395 137855412 -2461353 + MLT1D LTR MaLR 265 279 -226 2813 96 5 3 chr10 137855412 137855786 -2460979 - THE1C LTR MaLR 0 375 1 729 208 142 38 chr10 137855786 137855980 -2460785 + MLT1D LTR MaLR 279 498 -7 933 205 32 0 chr10 137857755 137857945 -2458820 - MLT1B LTR MaLR -8 382 187 777 236 26 5 chr10 137857982 137858173 -2458592 - MLT1B LTR MaLR -189 201 7 2511 72 0 0 chr10 137858604 137858897 -2457868 + AluY SINE Alu 2 294 -17 664 232 51 0 chr10 137859649 137859826 -2456939 - L1MB3 LINE L1 0 6183 5998 485 160 11 11 chr10 137861370 137861464 -2455301 + MER53 DNA DNA 96 189 0 329 341 23 0 chr10 137861970 137862099 -2454666 + MIR SINE MIR 16 147 -61 2948 180 7 4 chr10 137862129 137862685 -2454080 + L1MC1 LINE L1 5414 5971 -362 848 129 65 0 chr10 137862693 137862832 -2453933 + L1MC1 LINE L1 6179 6326 -7 302 114 0 0 chr10 137862851 137862895 -2453870 - MLT2D LTR ERVL 0 397 354 706 83 65 12 chr10 137862904 137863072 -2453693 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 1002 26 46 0 chr10 137863114 137863267 -2453498 + (TCTA)n Simple_repeat Simple_repeat 2 161 0 1879 161 24 9 chr10 137863267 137863608 -2453157 - MLT2D LTR ERVL -64 350 5 342 0 0 0 chr10 137863853 137863891 -2452874 + (CA)n Simple_repeat Simple_repeat 1 38 0 289 312 58 0 chr10 137863920 137864074 -2452691 - L1ME4a LINE L1 -226 5895 5733 288 340 35 0 chr10 137864094 137864238 -2452527 - L1ME4a LINE L1 -440 5681 5533 394 281 104 59 chr10 137866082 137866236 -2450529 + MIR SINE MIR 25 193 -69 1155 183 172 79 chr10 137866236 137866591 -2450174 + MLT1B LTR MaLR 1 388 -2 394 281 104 59 chr10 137866591 137866657 -2450108 + MIR SINE MIR 193 255 -7 229 319 30 30 chr10 137867612 137867781 -2448984 - L1MB3 LINE L1 -220 5901 5733 294 228 0 0 chr10 137868490 137868591 -2448174 + (TG)n Simple_repeat Simple_repeat 1 101 0 1475 219 35 33 chr10 137870433 137870889 -2445876 - MLT1C LTR MaLR -5 462 6 262 315 0 0 chr10 137872210 137872283 -2444482 + (TG)n Simple_repeat Simple_repeat 2 74 0 27 29 0 0 chr10 137872855 137872889 -2443876 + AT_rich Low_complexity Low_complexity 1 34 0 777 288 38 46 chr10 137873011 137873358 -2443407 + Charlie7 DNA MER1_type 284 627 -1985 2158 261 71 27 chr10 137873377 137874148 -2442617 - L1ME1 LINE L1 -7 6159 5316 2508 70 0 25 chr10 137874148 137874463 -2442302 + AluY SINE Alu 1 307 -4 2158 261 71 27 chr10 137874463 137874803 -2441962 - L1ME1 LINE L1 -850 5316 4993 2210 215 50 3 chr10 137875231 137875785 -2440980 - L1MD1 LINE L1 0 6242 5666 1787 254 21 35 chr10 137875793 137876368 -2440397 - L1ME1 LINE L1 -5 6230 5664 2859 261 53 20 chr10 137876368 137877297 -2439468 - L1MEc LINE L1 -5410 986 28 1365 284 100 31 chr10 137877289 137878195 -2438570 - L1ME1 LINE L1 -2401 3814 2971 * 2320 113 0 0 chr10 137878195 137878495 -2438270 - AluSx SINE Alu -12 300 1 1365 284 100 31 chr10 137878495 137879033 -2437732 - L1ME1 LINE L1 -3244 2971 409 1626 272 103 25 chr10 137879152 137879703 -2437062 + Charlie7 DNA MER1_type 614 1121 -1491 2047 130 0 0 chr10 137879703 137879980 -2436785 - AluSx SINE Alu -35 277 1 1626 272 103 25 chr10 137879980 137880746 -2436019 + Charlie7 DNA MER1_type 1121 2071 -541 2168 128 3 0 chr10 137882747 137883044 -2433721 + AluJb SINE Alu 1 298 -14 2238 112 0 10 chr10 137883241 137883546 -2433219 + AluSg SINE Alu 1 302 -8 284 0 28 0 chr10 137883586 137883622 -2433143 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1124 282 101 33 chr10 137884748 137885440 -2431325 - MER21B LTR ERV1 -116 747 9 1872 167 3 7 chr10 137885843 137886148 -2430617 - AluJb SINE Alu -8 304 1 6018 61 32 4 chr10 137886206 137886961 -2429804 + LTR17 LTR ERV1 3 778 -2 258 81 0 0 chr10 137887015 137887052 -2429713 + (CA)n Simple_repeat Simple_repeat 1 37 0 531 311 14 14 chr10 137887110 137887322 -2429443 + MER58A DNA MER1_type 6 217 -7 2115 172 56 0 chr10 137887583 137887961 -2428804 + MER57A LTR ERV1 1 399 -4 1857 145 20 46 chr10 137888464 137888815 -2427950 + LTR3b LTR ERVK 159 500 0 1170 87 0 0 chr10 137890146 137890697 -2426068 + (TC)n Simple_repeat Simple_repeat 1 551 0 391 260 142 4 chr10 137891384 137891665 -2425100 - LTR16A LTR ERVL -11 439 120 299 317 14 55 chr10 137891818 137891963 -2424802 - L2 LINE L2 0 3313 3175 237 196 0 0 chr10 137891964 137892015 -2424750 + GA-rich Low_complexity Low_complexity 3 53 0 399 266 30 0 chr10 137893472 137893621 -2423144 + MIR SINE MIR 17 171 -66 937 257 47 53 chr10 137893960 137894447 -2422318 - MLT1E3 LTR MaLR -36 588 105 763 282 120 14 chr10 137894458 137894876 -2421889 + MLT1C LTR MaLR 6 467 0 195 42 0 0 chr10 137895674 137895698 -2421067 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 6128 51 4 11 chr10 137895700 137896504 -2420261 - L1PA8 LINE L1 -26 6146 5349 308 141 7 30 chr10 137896595 137896667 -2420098 - MLT1J2 LTR MaLR -28 422 303 232 264 54 47 chr10 137896770 137896918 -2419847 - MLT1I LTR MaLR -241 168 20 993 137 117 95 chr10 137897027 137897302 -2419463 + MLT1A1 LTR MaLR 1 332 -64 1746 162 24 10 chr10 137897302 137897592 -2419173 - AluJb SINE Alu -14 298 5 993 137 117 95 chr10 137897592 137897659 -2419106 + MLT1A1 LTR MaLR 332 396 0 949 258 80 28 chr10 137897722 137898148 -2418617 + MLT1C LTR MaLR 10 457 -10 421 303 186 20 chr10 137898872 137899538 -2417227 - L2 LINE L2 -6 3307 2520 420 337 35 18 chr10 137902593 137902762 -2414003 - MIR SINE MIR -83 179 8 268 250 9 26 chr10 137903010 137903126 -2413639 + MLT1H LTR MaLR 124 237 -312 387 285 0 90 chr10 137904066 137904210 -2412555 - L2 LINE L2 -1 3271 3141 24 32 0 0 chr10 137905253 137905284 -2411481 + AT_rich Low_complexity Low_complexity 1 31 0 883 128 5 174 chr10 137905355 137905528 -2411237 + MER5A DNA MER1_type 8 138 -51 1986 156 10 0 chr10 137905528 137905830 -2410935 - AluSx SINE Alu -7 305 1 883 128 5 174 chr10 137905830 137905875 -2410890 + MER5A DNA MER1_type 138 189 0 334 319 18 9 chr10 137905876 137905989 -2410776 - L1M4 LINE L1 -2688 3458 3345 2596 105 6 0 chr10 137906109 137906462 -2410303 - THE1A LTR MaLR 0 355 1 1631 223 37 41 chr10 137907145 137907607 -2409158 + MLT1C LTR MaLR 8 467 0 289 337 20 0 chr10 137908472 137908570 -2408195 - L2 LINE L2 0 3272 3173 614 244 88 49 chr10 137909713 137910148 -2406617 - MLT1C LTR MaLR 0 467 1 309 261 26 17 chr10 137910967 137911082 -2405683 - MLT1J2 LTR MaLR -303 147 32 663 218 85 6 chr10 137911250 137911415 -2405350 + MER45A DNA AcHobo 1 178 0 180 278 122 22 chr10 137912028 137912118 -2404647 - L3 LINE CR1 -127 1450 1352 333 241 12 0 chr10 137912879 137912962 -2403803 + MER103 DNA DNA 62 145 -21 1029 161 2 0 chr10 137913796 137914261 -2402504 + (CCAA)n Simple_repeat Simple_repeat 1 466 0 227 186 0 0 chr10 137914263 137914306 -2402459 + (CCTA)n Simple_repeat Simple_repeat 4 46 0 885 145 2 14 chr10 137914306 137914735 -2402030 + (CCAA)n Simple_repeat Simple_repeat 1 424 0 1346 223 46 59 chr10 137917230 137917669 -2399096 + MLT1C LTR MaLR 1 433 -34 2170 96 50 0 chr10 137917696 137917978 -2398787 - AluSg SINE Alu -12 298 3 409 225 27 9 chr10 137919021 137919132 -2397633 + LTR33 LTR ERVL 400 512 -9 350 302 88 6 chr10 137919204 137919386 -2397379 - LTR33 LTR ERVL -240 281 85 32 0 0 0 chr10 137919483 137919515 -2397250 + AT_rich Low_complexity Low_complexity 1 32 0 718 279 48 18 chr10 137919844 137920116 -2396649 - L2 LINE L2 -698 2616 2337 1243 208 80 80 chr10 137920159 137920635 -2396130 + MLT1H LTR MaLR 39 514 -35 1877 195 12 14 chr10 137920825 137921250 -2395515 - MER74A LTR ERVL -1 557 134 263 140 35 0 chr10 137921250 137921307 -2395458 - MER74A LTR ERVL -366 192 134 * 670 190 149 0 chr10 137921299 137921473 -2395292 - MER74A LTR ERVL -358 200 1 643 291 122 3 chr10 137921493 137921836 -2394929 - L2 LINE L2 -1026 2288 1905 226 379 12 41 chr10 137921906 137922149 -2394616 + L2 LINE L2 3078 3313 0 213 300 0 0 chr10 137922364 137922414 -2394351 + L2 LINE L2 3264 3313 0 340 293 24 37 chr10 137923037 137923201 -2393564 - MLT1I LTR MaLR 0 409 248 463 196 31 0 chr10 137923482 137923579 -2393186 + MER5B DNA MER1_type 79 178 0 1846 104 32 0 chr10 137923700 137923979 -2392786 + MER50 LTR ERV1 1 288 -446 2115 184 92 25 chr10 137923989 137924466 -2392299 + LTR22 LTR ERVK 1 509 0 * 2274 181 21 9 chr10 137924466 137924896 -2391869 + MER50 LTR ERV1 299 733 -1 1509 179 11 11 chr10 137926350 137926629 -2390136 + MER49 LTR ERV1 13 291 -632 4928 46 3 0 chr10 137926664 137927253 -2389512 - LTR10C LTR ERV1 0 591 1 1531 182 13 67 chr10 137927260 137927332 -2389433 + MER4D LTR ERV1 549 623 -280 2673 69 3 66 chr10 137927332 137927569 -2389196 + THE1A LTR MaLR 1 207 -148 2408 100 0 3 chr10 137927569 137927879 -2388886 + AluSc SINE Alu 1 309 0 2673 69 3 66 chr10 137927879 137928020 -2388745 + THE1A LTR MaLR 207 355 0 1531 182 13 67 chr10 137928020 137928125 -2388640 + MER4D LTR ERV1 623 732 -171 4046 197 32 9 chr10 137928125 137928932 -2387833 - LTR1B LTR ERV1 0 826 1 1531 182 13 67 chr10 137928932 137929126 -2387639 + MER4D LTR ERV1 732 901 -2 447 291 99 23 chr10 137929226 137929398 -2387367 - MIR3 SINE MIR -17 191 7 1547 175 8 0 chr10 137929787 137930055 -2386710 - LTR39 LTR ERV1 -2 781 512 246 289 0 0 chr10 137930063 137930153 -2386612 + L1MC4 LINE L1 6614 6703 -1339 1360 183 12 8 chr10 137930164 137930405 -2386360 - AluSx SINE Alu -17 295 54 3152 132 27 10 chr10 137930405 137930919 -2385846 - LTR39 LTR ERV1 -260 523 1 266 239 0 30 chr10 137932022 137932089 -2384676 - MER81 DNA DNA -27 87 23 841 231 17 22 chr10 137934083 137934314 -2382451 - MSTD LTR MaLR 0 396 196 864 156 0 0 chr10 137934340 137934520 -2382245 + GA-rich Low_complexity Low_complexity 1 180 0 512 286 0 7 chr10 137934546 137934686 -2382079 - MSTD LTR MaLR -257 139 1 3536 253 26 31 chr10 137935466 137936866 -2379899 + L1MEc LINE L1 2087 3436 -2779 370 270 129 12 chr10 137936884 137937047 -2379718 + MIR SINE MIR 81 262 0 305 362 51 14 chr10 137937319 137937457 -2379308 - MIR SINE MIR -30 232 90 1656 176 7 24 chr10 137937458 137937786 -2378979 + AluJb SINE Alu 1 323 0 2333 96 3 0 chr10 137938523 137938825 -2377940 + AluSp SINE Alu 11 313 0 191 220 20 0 chr10 137938838 137938888 -2377877 - L2 LINE L2 -945 2369 2319 517 320 66 19 chr10 137940009 137940268 -2376497 - MLT1K LTR MaLR -305 283 13 1490 196 31 111 chr10 137940349 137940801 -2375964 - MLT1D LTR MaLR 0 505 101 2180 122 3 7 chr10 137940801 137941104 -2375661 + AluSx SINE Alu 1 302 -10 1490 196 31 111 chr10 137941104 137941191 -2375574 - MLT1D LTR MaLR -404 101 9 187 147 59 0 chr10 137941209 137941243 -2375522 - L2 LINE L2 -35 3237 3202 193 228 123 61 chr10 137941750 137941864 -2374901 - MIR SINE MIR -70 192 72 590 199 7 20 chr10 137941938 137942084 -2374681 - L1MA7 LINE L1 -289 6002 5859 763 176 34 14 chr10 137942636 137942784 -2373981 - MLT1D LTR MaLR -351 154 4 2689 266 74 26 chr10 137942791 137942847 -2373918 - L1MEc LINE L1 -3270 2945 2893 2504 73 0 3 chr10 137942847 137943150 -2373615 - AluY SINE Alu -9 302 1 2689 266 74 26 chr10 137943150 137944771 -2371994 - L1MEc LINE L1 -3322 2893 1220 1826 229 14 10 chr10 137944962 137945460 -2371305 - L1MEc LINE L1 -5225 1171 672 1281 219 11 21 chr10 137945677 137945964 -2370801 - L1MEc LINE L1 -5771 625 342 601 255 10 83 chr10 137946216 137946420 -2370345 - L1MEc LINE L1 -5864 532 344 319 327 26 0 chr10 137946910 137947023 -2369742 - L1MEc LINE L1 -6014 382 267 248 430 46 10 chr10 137947250 137947555 -2369210 - L3 LINE CR1 -383 1194 879 222 37 0 0 chr10 137948476 137948503 -2368262 + (TG)n Simple_repeat Simple_repeat 2 28 0 237 213 120 27 chr10 137949950 137950025 -2366740 - MLT1K LTR MaLR -15 573 492 478 313 67 64 chr10 137950063 137950392 -2366373 - MLT1K LTR MaLR -183 405 76 199 163 163 0 chr10 137950449 137950498 -2366267 + L2 LINE L2 3257 3313 0 246 250 0 0 chr10 137950523 137950571 -2366194 - MLT2C1 LTR ERVL 0 397 350 263 284 0 0 chr10 137950582 137950649 -2366116 + (TA)n Simple_repeat Simple_repeat 2 68 0 267 272 0 22 chr10 137950649 137950741 -2366024 + L1MC4 LINE L1 6614 6703 -1339 231 286 0 0 chr10 137950741 137950797 -2365968 + (TATG)n Simple_repeat Simple_repeat 4 59 0 1042 231 61 80 chr10 137950797 137951191 -2365574 - MLT2B1 LTR ERVL -40 480 1 663 194 19 39 chr10 137952937 137953092 -2363673 + Charlie4a DNA MER1_type 26 177 -331 864 230 35 19 chr10 137953191 137953448 -2363317 + Charlie4a DNA MER1_type 195 455 -53 1537 216 79 34 chr10 137954304 137954721 -2362044 + MLT1C LTR MaLR 23 458 -9 189 278 37 0 chr10 137956726 137956780 -2359985 + L2 LINE L2 3216 3271 -1 321 276 61 92 chr10 137960009 137960172 -2356593 + MIR SINE MIR 103 260 -2 2170 97 0 3 chr10 137961781 137962081 -2354684 + AluSq SINE Alu 1 299 -14 1834 136 176 16 chr10 137963387 137963756 -2353009 - MSTA LTR MaLR 0 428 1 341 22 22 0 chr10 137963856 137963902 -2352863 + (TG)n Simple_repeat Simple_repeat 1 47 0 25 0 0 0 chr10 137964027 137964052 -2352713 + AT_rich Low_complexity Low_complexity 1 25 0 629 238 63 120 chr10 137964981 137965330 -2351435 + MLT1C LTR MaLR 62 390 0 7861 83 12 18 chr10 137965636 137966763 -2350002 - HERVH LTR ERV1 -5984 1729 609 286 91 0 0 chr10 137966730 137966774 -2349991 - HERVH LTR ERV1 -6946 767 724 * 185 0 40 0 chr10 137967044 137967069 -2349696 + (TG)n Simple_repeat Simple_repeat 2 27 0 425 285 95 11 chr10 137967611 137967790 -2348975 + MIR SINE MIR 66 259 -3 4721 201 12 6 chr10 137968170 137969173 -2347592 + L1 LINE L1 3296 4304 -1842 1444 89 0 0 chr10 137969273 137969463 -2347302 + L1PA7 LINE L1 5965 6154 0 225 108 0 0 chr10 137970809 137970846 -2345919 + (CA)n Simple_repeat Simple_repeat 2 38 0 429 324 73 53 chr10 137971612 137972031 -2344734 - L1ME LINE L1 -605 5516 5093 5055 189 4 1 chr10 137972742 137973791 -2342974 - L1PBa LINE L1 -3022 3840 2788 407 134 0 0 chr10 137973891 137973958 -2342807 + Alu SINE Alu 243 309 -3 2410 184 57 8 chr10 137973959 137974449 -2342316 + L1MD2 LINE L1 5737 6250 -109 355 219 0 0 chr10 137975008 137975072 -2341693 + LTR16C LTR ERVL 418 481 -10 2002 134 0 0 chr10 137975739 137976038 -2340727 + AluSc SINE Alu 1 299 -10 443 332 43 102 chr10 137976184 137976627 -2340138 - L2 LINE L2 0 3272 2856 365 207 24 0 chr10 137978230 137978312 -2338453 + MLT2F LTR ERVL 570 653 -10 2060 132 0 0 chr10 137978442 137978746 -2338019 - AluSx SINE Alu -8 304 1 1681 148 14 7 chr10 137978762 137979053 -2337712 + L1MC1 LINE L1 5771 6063 -270 3683 120 37 32 chr10 137979066 137979691 -2337074 + LTR1 LTR ERV1 16 643 -142 530 290 131 6 chr10 137979796 137979972 -2336793 + LTR40a LTR ERVL 67 264 -255 185 314 167 13 chr10 137979978 137980134 -2336631 - L2 LINE L2 -778 2536 2357 453 307 34 80 chr10 137980350 137980614 -2336151 - L2 LINE L2 -9 3263 3012 356 341 33 42 chr10 137980646 137980860 -2335905 - MIR SINE MIR -31 231 20 531 221 0 0 chr10 137981038 137981151 -2335614 + L1MA4 LINE L1 5977 6089 -211 774 117 0 70 chr10 137981251 137981379 -2335386 - FLAM_C SINE Alu -19 124 6 2063 223 42 26 chr10 137981381 137982080 -2334685 - L1 LINE L1 -3372 3010 2298 536 210 34 8 chr10 137982069 137982188 -2334577 - L1 LINE L1 -5766 537 416 * 355 270 71 32 chr10 137982361 137982487 -2334278 + L2 LINE L2 3183 3313 0 384 272 48 41 chr10 137982592 137982739 -2334026 - MLT1J LTR MaLR -338 173 26 222 361 0 0 chr10 137983290 137983351 -2333414 + L3 LINE CR1 1428 1488 -89 1320 142 0 0 chr10 137984233 137984423 -2332342 + AluSg/x SINE Alu 92 281 -31 354 23 0 0 chr10 137984424 137984467 -2332298 + (CA)n Simple_repeat Simple_repeat 2 44 0 1142 261 117 22 chr10 137984513 137985007 -2331758 - L1ME3A LINE L1 -215 5955 5415 270 0 0 0 chr10 137985165 137985195 -2331570 + (CA)n Simple_repeat Simple_repeat 2 31 0 442 178 85 39 chr10 137986122 137986251 -2330514 - MLT1J2 LTR MaLR -313 137 3 314 264 13 57 chr10 137986261 137986420 -2330345 - HAL1 LINE L1 -295 2212 2061 724 235 56 0 chr10 137986681 137986877 -2329888 - HAL1 LINE L1 -802 1705 1499 660 218 194 81 chr10 137987290 137987936 -2328829 - L2 LINE L2 -1243 2071 1353 600 268 52 21 chr10 137988637 137988831 -2327934 - MIR SINE MIR -56 206 7 334 302 56 0 chr10 137988832 137988958 -2327807 + MIR SINE MIR 109 241 -21 429 280 8 8 chr10 137989355 137989473 -2327292 - MIR SINE MIR -109 153 36 1572 197 10 61 chr10 137989511 137989922 -2326843 + MLT1B LTR MaLR 1 390 0 239 257 27 14 chr10 137989923 137989997 -2326768 + GA-rich Low_complexity Low_complexity 5 79 0 468 250 61 12 chr10 137991034 137991198 -2325567 - LTR16C LTR ERVL -2 489 318 900 164 57 0 chr10 137991466 137991625 -2325140 + MSTB LTR MaLR 211 378 -48 615 147 0 0 chr10 137991630 137991725 -2325040 - L1MB1 LINE L1 -3 6165 6071 623 209 43 0 chr10 137991725 137991864 -2324901 - L1 LINE L1 -1018 5128 4984 1426 203 14 14 chr10 137991865 137992151 -2324614 - AluJo SINE Alu -21 291 6 5265 167 24 17 chr10 137992204 137993241 -2323524 - L1 LINE L1 -1198 4948 3905 342 205 0 0 chr10 137993355 137993433 -2323332 + (TG)n Simple_repeat Simple_repeat 2 79 0 351 318 0 9 chr10 137993468 137993575 -2323190 + MLT1J LTR MaLR 100 205 -306 436 194 0 74 chr10 137993636 137993744 -2323021 - MER5A DNA MER1_type -89 100 1 327 261 193 34 chr10 137994772 137995010 -2321755 - L1MC/D LINE L1 -1972 5836 5561 234 230 40 81 chr10 137995249 137995362 -2321403 - L1MC4 LINE L1 0 8042 7935 2327 57 3 7 chr10 137995362 137995658 -2321107 - AluY SINE Alu -16 295 1 234 230 40 81 chr10 137995658 137995692 -2321073 - L1MC4 LINE L1 -107 7935 7901 198 335 123 8 chr10 137996544 137996804 -2319961 - L2 LINE L2 -685 2629 2340 2538 244 57 44 chr10 137996892 137998012 -2318753 - L1MEc LINE L1 -2963 3252 2169 183 331 39 47 chr10 137999068 137999195 -2317570 + L2 LINE L2 3132 3257 -15 497 235 0 7 chr10 138000399 138000548 -2316217 + (TG)n Simple_repeat Simple_repeat 2 149 0 290 257 53 71 chr10 138001684 138001797 -2314968 + L1MC3 LINE L1 6716 6826 -959 2368 101 16 0 chr10 138004702 138005008 -2311757 + AluSx SINE Alu 1 311 -1 1103 237 73 9 chr10 138006183 138006500 -2310265 - MLT1A1 LTR MaLR -15 350 14 944 205 133 0 chr10 138007208 138007442 -2309323 - MER68 LTR ERV1 -296 266 2 716 11 21 0 chr10 138007552 138007645 -2309120 - L1PA4 LINE L1 0 6155 6061 494 292 41 28 chr10 138009889 138010124 -2306641 + MIR SINE MIR 15 253 -9 938 225 97 72 chr10 138014414 138014845 -2301920 - MLT1C LTR MaLR -25 442 1 183 42 0 0 chr10 138015090 138015114 -2301651 + (CCCCCA)n Simple_repeat Simple_repeat 4 27 0 715 219 78 54 chr10 138015652 138016035 -2300730 - MLT1C LTR MaLR -12 378 6 4662 92 6 14 chr10 138016325 138016692 -2300073 - PABL_A LTR ERV1 -1 659 298 1352 205 25 76 chr10 138016692 138017166 -2299599 + LTR7 LTR ERV1 1 450 0 4662 92 6 14 chr10 138017166 138017462 -2299303 - PABL_A LTR ERV1 -362 298 1 493 282 71 46 chr10 138018607 138018958 -2297807 + L1MC4 LINE L1 6746 7105 -937 516 303 72 14 chr10 138020234 138020442 -2296323 + MIR SINE MIR 18 237 -25 2853 157 11 94 chr10 138020461 138021117 -2295648 - LTR18B LTR ERVL -13 601 1 2795 222 31 29 chr10 138022543 138023421 -2293344 + L1M4 LINE L1 2488 3367 -2779 342 276 135 0 chr10 138023446 138023602 -2293163 + MIR SINE MIR 86 262 0 307 355 51 14 chr10 138023874 138024012 -2292753 - MIR SINE MIR -30 232 90 1670 176 7 24 chr10 138024013 138024341 -2292424 + AluJb SINE Alu 1 323 0 2338 96 3 0 chr10 138025078 138025380 -2291385 + AluSp SINE Alu 11 313 0 186 220 20 0 chr10 138025393 138025443 -2291322 - L2 LINE L2 -945 2369 2319 578 320 66 19 chr10 138026563 138026822 -2289943 - MLT1K LTR MaLR -305 283 13 1573 194 31 111 chr10 138026903 138027355 -2289410 - MLT1D LTR MaLR 0 505 101 2189 122 3 7 chr10 138027355 138027658 -2289107 + AluSx SINE Alu 1 302 -10 1573 194 31 111 chr10 138027658 138027745 -2289020 - MLT1D LTR MaLR -404 101 9 206 274 88 18 chr10 138028304 138028417 -2288348 - MIR SINE MIR -70 192 72 603 199 7 20 chr10 138028491 138028637 -2288128 - L1MA7 LINE L1 -289 6002 5859 780 176 34 14 chr10 138029189 138029337 -2287428 - MLT1D LTR MaLR -351 154 4 2717 262 74 26 chr10 138029344 138029400 -2287365 - L1MEc LINE L1 -3270 2945 2893 2506 73 0 3 chr10 138029400 138029702 -2287063 - AluY SINE Alu -10 301 1 2717 262 74 26 chr10 138029702 138031323 -2285442 - L1MEc LINE L1 -3322 2893 1220 1843 231 12 8 chr10 138031514 138032012 -2284753 - L1MEc LINE L1 -5225 1171 672 1320 228 19 22 chr10 138032193 138032517 -2284248 - L1MEc LINE L1 -5732 664 342 638 240 10 83 chr10 138032769 138032973 -2283792 - L1MEc LINE L1 -5864 532 344 345 319 26 0 chr10 138033463 138033576 -2283189 - L1MEc LINE L1 -6014 382 267 225 430 46 10 chr10 138033803 138034108 -2282657 - L3 LINE CR1 -383 1194 879 222 37 0 0 chr10 138035029 138035056 -2281709 + (TG)n Simple_repeat Simple_repeat 2 28 0 230 213 120 27 chr10 138036502 138036577 -2280188 - MLT1K LTR MaLR -15 573 492 490 326 66 60 chr10 138036615 138036965 -2279800 - MLT1K LTR MaLR -183 405 54 182 163 163 0 chr10 138037001 138037050 -2279715 + L2 LINE L2 3257 3313 0 306 227 0 30 chr10 138037139 138037205 -2279560 + L1MC4 LINE L1 6640 6703 -1339 256 283 0 22 chr10 138037207 138037299 -2279466 + L1MC4 LINE L1 6614 6703 -1339 231 286 0 0 chr10 138037299 138037355 -2279410 + (TATG)n Simple_repeat Simple_repeat 4 59 0 1014 236 61 80 chr10 138037355 138037749 -2279016 - MLT2B1 LTR ERVL -40 480 1 642 194 19 39 chr10 138039493 138039648 -2277117 + Charlie4a DNA MER1_type 26 177 -331 844 230 35 19 chr10 138039747 138040004 -2276761 + Charlie4a DNA MER1_type 195 455 -53 1502 233 70 24 chr10 138040860 138041277 -2275488 + MLT1C LTR MaLR 23 458 -9 180 278 37 0 chr10 138043282 138043336 -2273429 + L2 LINE L2 3216 3271 -1 302 264 0 58 chr10 138046638 138046725 -2270040 + MIR SINE MIR 179 260 -2 2327 97 0 3 chr10 138048334 138048634 -2268131 + AluSq SINE Alu 1 299 -14 1834 136 176 16 chr10 138049940 138050309 -2266456 - MSTA LTR MaLR 0 428 1 377 20 20 0 chr10 138050409 138050459 -2266306 + (TG)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 138050584 138050609 -2266156 + AT_rich Low_complexity Low_complexity 1 25 0 648 235 63 120 chr10 138051545 138051894 -2264871 + MLT1C LTR MaLR 62 390 0 4917 143 51 19 chr10 138052130 138052316 -2264449 - L1MC1 LINE L1 -11 6322 6143 1564 213 69 16 chr10 138052316 138052692 -2264073 - MSTD LTR MaLR 0 396 1 4917 143 51 19 chr10 138052692 138053156 -2263609 - L1MC1 LINE L1 -190 6143 5634 2708 139 29 0 chr10 138053156 138053572 -2263193 + MSTA LTR MaLR 1 428 0 4917 143 51 19 chr10 138053572 138053800 -2262965 - L1MC1 LINE L1 -699 5634 5415 1407 237 87 54 chr10 138057462 138057947 -2258818 + MLT1D LTR MaLR 5 505 0 404 204 58 0 chr10 138058599 138058702 -2258063 + MIR3 SINE MIR 85 193 -15 296 317 10 0 chr10 138060542 138060643 -2256122 - L1ME3 LINE L1 -1 6161 6060 6295 265 78 29 chr10 138060648 138064208 -2252557 - L1MCc LINE L1 -956 5985 2272 275 243 104 12 chr10 138064216 138064389 -2252376 - L1M4 LINE L1 -2744 3402 3214 2101 215 62 4 chr10 138064401 138064898 -2251867 - L1MA9 LINE L1 -33 6279 5754 204 148 49 0 chr10 138064898 138064959 -2251806 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 3001 174 5 22 chr10 138064959 138065771 -2250994 - L1M2 LINE L1 -519 5793 4996 796 182 32 11 chr10 138065767 138065954 -2250811 - L1M2 LINE L1 -1433 4713 4523 * 620 267 67 70 chr10 138065973 138066796 -2249969 - L1MCc LINE L1 -4921 2201 1163 222 176 0 0 chr10 138067663 138067714 -2249051 + GA-rich Low_complexity Low_complexity 1 51 0 210 261 46 76 chr10 138067922 138068008 -2248757 + MER5A DNA MER1_type 82 155 -23 1977 115 21 0 chr10 138068548 138068836 -2247929 - AluSx SINE Alu -18 294 1 372 354 19 12 chr10 138068979 138069140 -2247625 + L2 LINE L2 1218 1379 -1935 264 362 43 32 chr10 138069582 138069770 -2246995 + MIR SINE MIR 6 195 -67 2854 70 13 0 chr10 138073977 138074349 -2242416 + L1PA10 LINE L1 5792 6168 0 306 0 0 0 chr10 138074648 138074682 -2242083 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1812 118 0 4 chr10 138074683 138074946 -2241819 - AluSg SINE Alu -32 278 17 1682 221 86 28 chr10 138075489 138076033 -2240732 + L1MA9 LINE L1 5732 6312 0 363 305 0 0 chr10 138076272 138076377 -2240388 + G-rich Low_complexity Low_complexity 3 107 0 2341 61 0 3 chr10 138077347 138077643 -2239122 + AluY SINE Alu 1 295 -16 2148 123 0 0 chr10 138078192 138078492 -2238273 - AluSx SINE Alu -12 300 1 875 274 111 23 chr10 138078708 138079193 -2237572 - HAL1b LINE L1 -250 1098 571 977 247 44 57 chr10 138079342 138079727 -2237038 - HAL1b LINE L1 -703 645 266 239 236 0 18 chr10 138080211 138080266 -2236499 + CT-rich Low_complexity Low_complexity 1 54 0 518 243 128 0 chr10 138080319 138080467 -2236298 + MER5B DNA MER1_type 7 173 -5 255 348 33 0 chr10 138083275 138083367 -2233398 - MIR SINE MIR -5 257 163 400 367 0 0 chr10 138083958 138084116 -2232649 + (TG)n Simple_repeat Simple_repeat 1 158 0 252 175 62 62 chr10 138084972 138085052 -2231713 - MLT1C LTR MaLR -380 87 8 339 288 12 0 chr10 138085137 138085217 -2231548 - MER81 DNA DNA 0 114 34 446 275 120 48 chr10 138085405 138085838 -2230927 - L1ME3A LINE L1 -205 5948 5485 328 339 20 27 chr10 138085952 138086247 -2230518 - L1ME3A LINE L1 -1446 4683 4391 680 271 31 5 chr10 138086277 138086469 -2230296 + MLT1F1 LTR MaLR 2 198 -369 276 250 109 0 chr10 138086502 138086566 -2230199 + MLT1F1 LTR MaLR 177 247 -320 437 265 80 0 chr10 138086624 138086775 -2229990 - L1ME3A LINE L1 -2358 3771 3609 273 313 0 31 chr10 138086772 138086868 -2229897 - L1ME3A LINE L1 -5084 1035 943 * 2927 164 35 71 chr10 138086859 138087524 -2229241 - L1MD1 LINE L1 -1 6241 5601 * 4100 245 43 26 chr10 138087519 138088330 -2228435 - L1M4 LINE L1 -2629 3517 2671 552 172 0 11 chr10 138088330 138088423 -2228342 + HY4 scRNA scRNA 2 93 0 4100 245 43 26 chr10 138088423 138088995 -2227770 - L1M4 LINE L1 -3475 2671 2110 1401 221 49 6 chr10 138089532 138089880 -2226885 - MLT1A1 LTR MaLR -2 363 1 292 196 53 105 chr10 138091168 138091301 -2225464 + MER5A DNA MER1_type 64 189 0 440 317 30 18 chr10 138091443 138091610 -2225155 - MER5B DNA MER1_type -4 174 6 231 254 30 0 chr10 138091738 138091805 -2224960 + MLT1H LTR MaLR 107 175 -374 1429 74 161 21 chr10 138092152 138092394 -2224371 + LTR9 LTR ERV1 1 276 -336 225 97 0 0 chr10 138092394 138092425 -2224340 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092425 138092456 -2224309 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092456 138092487 -2224278 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092487 138092518 -2224247 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092518 138092549 -2224216 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092549 138092580 -2224185 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092580 138092611 -2224154 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092611 138092642 -2224123 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092642 138092673 -2224092 + LTR9 LTR ERV1 246 276 -336 225 97 0 0 chr10 138092673 138092704 -2224061 + LTR9 LTR ERV1 246 276 -336 2224 129 57 11 chr10 138092704 138093053 -2223712 + LTR9 LTR ERV1 246 610 -2 494 293 39 70 chr10 138093410 138093666 -2223099 + MIR SINE MIR 2 249 -13 256 231 67 29 chr10 138093804 138093908 -2222857 + L1ME LINE L1 176 283 -5922 517 330 57 18 chr10 138094035 138094262 -2222503 + L1ME LINE L1 2014 2249 -4147 396 295 94 65 chr10 138094536 138095516 -2221249 + L1MC4a LINE L1 811 1818 -4578 232 233 186 10 chr10 138095615 138095808 -2220957 + L1MC4a LINE L1 3059 3285 -2930 844 310 109 25 chr10 138095925 138096051 -2220714 + L1MC4a LINE L1 3440 3554 -2661 203 0 37 0 chr10 138096051 138096078 -2220687 + (CA)n Simple_repeat Simple_repeat 2 29 0 844 310 109 25 chr10 138096078 138096784 -2219981 + L1MC4a LINE L1 3554 4342 -1873 1816 124 18 0 chr10 138096789 138097063 -2219702 + MLT2A2 LTR ERVL 1 279 -174 2209 112 0 0 chr10 138097644 138097956 -2218809 - AluSx SINE Alu 0 312 1 1970 235 44 39 chr10 138099376 138099941 -2216824 - L1MDa LINE L1 -5972 568 1 253 332 88 32 chr10 138100131 138100381 -2216384 - L1MEd LINE L1 -5457 662 399 238 331 83 30 chr10 138102642 138102775 -2213990 - L2 LINE L2 -1 3271 3132 405 289 134 0 chr10 138103212 138103361 -2213404 + MIR SINE MIR 77 245 -17 252 0 0 0 chr10 138104113 138104141 -2212624 + (TG)n Simple_repeat Simple_repeat 2 29 0 1147 153 39 18 chr10 138104372 138104635 -2212130 + MLT2A2 LTR ERVL 283 453 0 446 244 146 0 chr10 138104740 138104904 -2211861 + L1MC4a LINE L1 4864 5051 -1164 250 322 8 8 chr10 138104967 138105085 -2211680 + L1MC4a LINE L1 5192 5309 -906 188 318 23 0 chr10 138106990 138107078 -2209687 + MIR3 SINE MIR 113 202 -6 1297 319 80 64 chr10 138107717 138108751 -2208014 + L1M4 LINE L1 2111 3161 -2985 2072 99 31 3 chr10 138108854 138109147 -2207618 + AluSq SINE Alu 1 301 -12 308 366 40 5 chr10 138109169 138109393 -2207372 + L1M4 LINE L1 3899 4130 -2016 2986 232 52 81 chr10 138109394 138109872 -2206893 + L1MC4a LINE L1 5425 5915 -1962 1987 108 0 4 chr10 138109872 138110183 -2206582 + AluSx SINE Alu 5 314 0 2986 232 52 81 chr10 138110183 138110708 -2206057 + L1MC4a LINE L1 5915 6387 -1490 1954 180 15 0 chr10 138110708 138111047 -2205718 + MER2 DNA MER2_type 1 344 0 2986 232 52 81 chr10 138111047 138111318 -2205447 + L1MC4a LINE L1 6387 6664 -1213 260 356 164 0 chr10 138111489 138111666 -2205099 + MIR SINE MIR 19 224 -38 2113 113 0 3 chr10 138112312 138112612 -2204153 + AluSx SINE Alu 1 299 -13 4648 93 9 15 chr10 138112804 138112917 -2203848 - L1PA13 LINE L1 -11 6152 6040 1755 110 71 151 chr10 138112917 138113382 -2203383 - MSTA LTR MaLR 0 428 1 4648 93 9 15 chr10 138113382 138113817 -2202948 - L1PA13 LINE L1 -123 6040 5606 1763 159 0 17 chr10 138113817 138114150 -2202615 - AluSx SINE Alu 0 312 5 4648 93 9 15 chr10 138114150 138114264 -2202501 - L1PA13 LINE L1 -557 5606 5493 3767 224 43 30 chr10 138114382 138116287 -2200478 - L1ME1 LINE L1 -3 6232 4316 2633 257 101 22 chr10 138116283 138116562 -2200203 - L1ME1 LINE L1 -3704 2523 2268 * 1937 121 87 34 chr10 138116562 138116918 -2199847 - THE1C LTR MaLR 0 375 1 2633 257 101 22 chr10 138116918 138117413 -2199352 - L1ME1 LINE L1 -3959 2268 1814 6996 68 5 0 chr10 138117413 138118992 -2197773 + L1PA7 LINE L1 4572 6154 0 2633 257 101 22 chr10 138118992 138119502 -2197263 - L1ME1 LINE L1 -4413 1814 1166 508 293 162 30 chr10 138119506 138119803 -2196962 - L1ME4a LINE L1 -295 5895 5560 252 0 0 0 chr10 138119849 138119877 -2196888 + (TG)n Simple_repeat Simple_repeat 1 28 0 2098 107 3 0 chr10 138120115 138120406 -2196359 - AluSq SINE Alu -21 292 1 2019 199 6 3 chr10 138120842 138121198 -2195567 - MLT1A1 LTR MaLR -8 357 1 313 363 103 30 chr10 138121217 138121685 -2195080 - L1ME4a LINE L1 -2173 4042 3541 436 277 195 59 chr10 138122150 138123090 -2193675 - L1MEc LINE L1 -2993 3222 828 236 317 176 0 chr10 138125918 138126060 -2190705 - MIR SINE MIR -73 189 23 182 309 0 53 chr10 138128310 138128404 -2188361 - L2 LINE L2 -168 3104 3016 443 179 21 79 chr10 138128404 138128544 -2188221 - AluSg/x SINE Alu -2 310 179 21 0 0 0 chr10 138128628 138128649 -2188116 + AT_rich Low_complexity Low_complexity 1 21 0 323 23 23 0 chr10 138129052 138129096 -2187669 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 1505 156 123 27 chr10 138129946 138130279 -2186486 + MLT1A1 LTR MaLR 1 365 0 1573 241 21 3 chr10 138130305 138130686 -2186079 + L1MA9 LINE L1 4883 5270 -876 426 340 36 38 chr10 138130727 138131282 -2185483 + L1MC4 LINE L1 5423 5976 -2066 * 3022 199 70 20 chr10 138130799 138131538 -2185227 + L1MA9 LINE L1 5495 6270 -42 1271 197 110 82 chr10 138132361 138132859 -2183906 - MLT2B2 LTR ERVL -3 512 1 197 229 229 38 chr10 138134165 138134243 -2182522 - L2 LINE L2 -1 3271 3209 3544 105 35 25 chr10 138134243 138134765 -2182000 - MER1A DNA MER1_type 0 527 1 197 229 229 38 chr10 138134765 138134791 -2181974 - L2 LINE L2 -63 3209 3147 356 153 0 0 chr10 138135634 138135693 -2181072 + L1MA5A LINE L1 6236 6294 -3 250 311 46 60 chr10 138136495 138136646 -2180119 - MIR SINE MIR -90 172 24 2242 153 30 37 chr10 138137538 138137969 -2178796 + MSTC LTR MaLR 1 428 0 401 286 19 39 chr10 138138461 138138615 -2178150 - MLT1J2 LTR MaLR -20 430 280 235 176 20 0 chr10 138138686 138138737 -2178028 - MLT1J1 LTR MaLR -107 339 288 258 212 59 47 chr10 138138787 138138872 -2177893 - MLT1J1 LTR MaLR -73 373 288 254 255 35 22 chr10 138138922 138139020 -2177745 - MLT1J1 LTR MaLR -71 379 280 381 267 120 39 chr10 138143136 138143394 -2173371 + Charlie2 DNA MER1_type 1856 2134 -728 1822 124 0 67 chr10 138143407 138143721 -2173044 + AluSx SINE Alu 1 293 -19 474 219 27 7 chr10 138143723 138143862 -2172903 + Charlie2 DNA MER1_type 2638 2779 -83 1039 193 95 38 chr10 138143862 138144203 -2172562 - MSTD LTR MaLR 0 396 1 2285 210 19 2 chr10 138144390 138144861 -2171904 - L1MC3 LINE L1 -8 7777 7299 328 167 56 8 chr10 138145019 138145145 -2171620 + (TG)n Simple_repeat Simple_repeat 2 133 0 465 78 49 10 chr10 138145207 138145309 -2171456 + (TG)n Simple_repeat Simple_repeat 1 106 0 216 0 0 0 chr10 138146726 138146750 -2170015 + (TG)n Simple_repeat Simple_repeat 1 24 0 843 65 16 8 chr10 138147232 138147356 -2169409 + AluY SINE Alu 187 311 0 2245 99 3 3 chr10 138148531 138148864 -2167901 - AluSx SINE Alu 0 333 1 314 333 53 15 chr10 138149419 138149551 -2167214 - L2 LINE L2 0 3272 3136 2120 96 0 30 chr10 138150431 138150733 -2166032 - AluSg SINE Alu -17 293 1 201 318 45 23 chr10 138150806 138150894 -2165871 - MIR3 SINE MIR -23 185 96 1776 227 30 28 chr10 138151979 138152438 -2164327 + MER65C LTR ERV1 1 460 -1 351 291 28 71 chr10 138155694 138155948 -2160817 + L2 LINE L2 1752 1994 -1320 273 323 84 30 chr10 138156132 138156429 -2160336 + L2 LINE L2 2059 2371 -943 206 336 89 62 chr10 138156819 138157236 -2159529 + L2 LINE L2 2820 3247 -25 201 364 30 0 chr10 138158293 138158392 -2158373 - MIR SINE MIR -160 102 1 2326 107 0 0 chr10 138159073 138159381 -2157384 - AluSx SINE Alu -4 308 1 324 329 44 22 chr10 138160827 138160964 -2155801 + MIR SINE MIR 14 153 -109 439 269 96 106 chr10 138163095 138163367 -2153398 - L1ME3 LINE L1 -224 5938 5665 233 152 0 0 chr10 138163367 138163413 -2153352 - LTR66 LTR ERVL -171 439 394 * 269 146 0 0 chr10 138163375 138163423 -2153342 + LTR66 LTR ERVL 394 441 -169 * 439 269 96 106 chr10 138163413 138163428 -2153337 - L1ME3 LINE L1 -497 5665 5651 315 0 0 0 chr10 138163428 138163463 -2153302 + (TG)n Simple_repeat Simple_repeat 2 36 0 439 269 96 106 chr10 138163463 138163809 -2152956 - L1ME3 LINE L1 -511 5651 5266 318 265 110 0 chr10 138163864 138164000 -2152765 - L1ME3 LINE L1 -954 5192 5042 243 88 0 0 chr10 138164000 138164034 -2152731 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 2255 98 0 3 chr10 138164041 138164337 -2152428 - AluSg SINE Alu -14 296 2 2101 145 0 0 chr10 138164340 138164644 -2152121 - AluSx SINE Alu -8 304 1 760 266 75 63 chr10 138164763 138165191 -2151574 - L1ME3A LINE L1 -340 5813 5381 * 1214 218 63 4 chr10 138165190 138165477 -2151288 - L1MB5 LINE L1 -59 6115 5801 1471 302 121 18 chr10 138165651 138166624 -2150141 - L1ME3A LINE L1 -896 5233 4160 971 261 119 68 chr10 138167227 138167369 -2149396 - L1MEd LINE L1 -4787 1344 1211 1773 157 3 46 chr10 138167369 138167674 -2149091 - AluSx SINE Alu -19 293 2 971 261 119 68 chr10 138167674 138168608 -2148157 - L1MEd LINE L1 -4920 1211 332 692 277 134 80 chr10 138168820 138169231 -2147534 + MLT2E LTR ERVL 1 433 -195 208 266 62 16 chr10 138169842 138169906 -2146859 - L3 LINE CR1 -6 1571 1505 195 384 23 0 chr10 138171257 138171343 -2145422 + L2 LINE L2 2664 2751 -563 2863 208 50 27 chr10 138171379 138171941 -2144824 - L1MB8 LINE L1 0 6178 5630 1991 129 70 20 chr10 138171941 138172298 -2144467 - THE1C LTR MaLR 0 375 1 2863 208 50 27 chr10 138172298 138172421 -2144344 - L1MB8 LINE L1 -548 5630 5511 2370 101 7 0 chr10 138172421 138172729 -2144036 + AluSg SINE Alu 1 310 0 2863 208 50 27 chr10 138172729 138172973 -2143792 - L1MB8 LINE L1 -667 5511 5200 2203 224 64 21 chr10 138172946 138173172 -2143593 - L1MB8 LINE L1 -1250 4896 4681 * 5879 132 14 4 chr10 138173172 138174688 -2142077 + L1PA13 LINE L1 4638 6163 0 2203 224 64 21 chr10 138174688 138175069 -2141696 - L1MB8 LINE L1 -1465 4681 4263 * 7656 255 67 40 chr10 138175065 138175307 -2141458 - L1ME1 LINE L1 -28 6207 5973 2130 124 0 0 chr10 138175307 138175606 -2141159 - AluSc SINE Alu -10 299 1 7656 255 67 40 chr10 138175606 138175910 -2140855 - L1ME1 LINE L1 -262 5973 5679 1803 140 0 4 chr10 138175910 138176174 -2140591 + AluSq SINE Alu 46 308 -5 7656 255 67 40 chr10 138176174 138178208 -2138557 - L1ME1 LINE L1 -556 5679 3701 2551 46 0 7 chr10 138178208 138178515 -2138250 - AluY SINE Alu -6 305 1 7656 255 67 40 chr10 138178515 138178910 -2137855 - L1ME1 LINE L1 -2534 3701 3318 2040 112 3 0 chr10 138178910 138179195 -2137570 - AluSx SINE Alu -22 290 5 7656 255 67 40 chr10 138179195 138181559 -2135206 - L1ME1 LINE L1 -2917 3318 762 8861 156 19 9 chr10 138181578 138182234 -2134531 - L1MA3 LINE L1 -17 6288 5640 2164 131 16 49 chr10 138182234 138182622 -2134143 - THE1C LTR MaLR 0 375 1 8861 156 19 9 chr10 138182622 138184529 -2132236 - L1MA3 LINE L1 -665 5640 3695 1674 289 50 32 chr10 138184524 138185219 -2131546 - L1ME1 LINE L1 -5624 772 65 * 249 263 105 72 chr10 138187462 138187671 -2129094 - L1MC/D LINE L1 -2291 5451 5236 379 319 167 32 chr10 138188360 138188642 -2128123 + L2 LINE L2 2994 3313 0 269 118 20 0 chr10 138189968 138190019 -2126746 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 333 354 122 22 chr10 138191419 138191648 -2125117 - L1MC/D LINE L1 -2044 5764 5513 578 271 19 61 chr10 138191663 138191877 -2124888 - MER63A DNA MER1_type -1 209 5 2727 262 86 39 chr10 138192583 138194284 -2122481 - L1ME LINE L1 -2695 3385 1645 1592 193 62 3 chr10 138194287 138194608 -2122157 + MER2 DNA MER2_type 1 340 -5 1004 299 100 35 chr10 138194616 138194952 -2121813 - L1ME LINE L1 -4542 1538 1225 2275 92 3 7 chr10 138194952 138195247 -2121518 - AluSx SINE Alu -17 295 2 1004 299 100 35 chr10 138195247 138195911 -2120854 - L1ME LINE L1 -4855 1225 496 22 35 0 0 chr10 138195996 138196025 -2120740 + AT_rich Low_complexity Low_complexity 1 29 0 286 309 33 40 chr10 138196091 138196243 -2120522 - L1ME LINE L1 -5665 405 255 329 296 7 59 chr10 138196608 138196743 -2120022 - L1ME LINE L1 -5887 183 56 334 291 107 30 chr10 138196829 138197063 -2119702 - L1M4 LINE L1 -1979 4167 3916 251 332 55 18 chr10 138197492 138197699 -2119066 - L1 LINE L1 -1088 5058 4843 333 291 0 0 chr10 138198142 138198221 -2118544 + MER21B LTR ERV1 12 90 -773 2063 194 155 74 chr10 138198313 138199067 -2117698 + MER21B LTR ERV1 49 863 0 22 35 0 0 chr10 138199098 138199127 -2117638 + AT_rich Low_complexity Low_complexity 1 29 0 468 288 112 52 chr10 138199127 138199512 -2117253 - L1 LINE L1 -2150 3996 3589 253 272 44 44 chr10 138199875 138200011 -2116754 - L1MC/D LINE L1 -1903 5905 5770 384 248 17 17 chr10 138200158 138200275 -2116490 - L2 LINE L2 0 3272 3156 2564 67 3 3 chr10 138200764 138201077 -2115688 - AluSp SINE Alu 0 313 1 399 318 117 14 chr10 138201540 138201754 -2115011 - MIR SINE MIR -14 248 13 246 286 199 63 chr10 138202796 138203083 -2113682 - L3 LINE CR1 -179 1398 1073 244 241 221 35 chr10 138203228 138203373 -2113392 - L3 LINE CR1 -599 978 807 181 283 28 66 chr10 138203449 138203555 -2113210 - MIR SINE MIR -57 205 104 188 279 0 0 chr10 138205134 138205177 -2111588 + L2 LINE L2 3020 3062 -210 830 238 32 167 chr10 138205426 138205990 -2110775 + L1M4 LINE L1 3544 4032 -2114 667 256 88 24 chr10 138206014 138206296 -2110469 + MER54A LTR ERVL 101 557 -260 467 246 48 0 chr10 138206518 138206644 -2110121 + L1M4 LINE L1 4036 4167 -1979 222 222 0 0 chr10 138206645 138206699 -2110066 + A-rich Low_complexity Low_complexity 1 54 0 2277 86 3 0 chr10 138206717 138207019 -2109746 + AluSq SINE Alu 1 303 -10 323 209 0 0 chr10 138207023 138207090 -2109675 + L1M4 LINE L1 4189 4255 -1891 * 481 273 71 64 chr10 138207066 138207653 -2109112 + L1ME3A LINE L1 770 1392 -4883 229 320 68 0 chr10 138207733 138207836 -2108929 + L1ME3A LINE L1 1372 1481 -4650 226 288 25 0 chr10 138208164 138208244 -2108521 + L1ME3A LINE L1 4734 4815 -1314 537 259 122 24 chr10 138208354 138208645 -2108120 + L1ME3A LINE L1 5335 5596 -549 7572 72 6 0 chr10 138208645 138209608 -2107157 + LTR5 LTR ERVK 1 969 0 537 259 122 24 chr10 138209608 138209839 -2106926 + L1ME3A LINE L1 5596 5965 -180 314 319 83 33 chr10 138209842 138210025 -2106740 + L1ME3A LINE L1 5915 6100 -49 2481 159 16 2 chr10 138210063 138210548 -2106217 - L1 LINE L1 -1384 4762 4271 1814 150 9 12 chr10 138210532 138210871 -2105894 + L1MA3 LINE L1 5739 6076 -229 * 181 54 0 54 chr10 138210890 138210927 -2105838 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 1111 103 0 0 chr10 138210928 138211074 -2105691 - MER107 DNA MER1_type -51 146 1 1008 209 4 13 chr10 138211075 138211309 -2105456 + L1MA4 LINE L1 6069 6300 0 302 331 8 15 chr10 138212839 138212972 -2103793 + (CATATA)n Simple_repeat Simple_repeat 5 136 0 5172 148 10 44 chr10 138213793 138214725 -2102040 - MER4D LTR ERV1 -1 902 3 4153 152 20 21 chr10 138215124 138215834 -2100931 + LTR62 LTR ERVK 7 715 -4 371 297 76 43 chr10 138216143 138216328 -2100437 + MER20B DNA MER1_type 6 196 -587 436 236 16 0 chr10 138217445 138217568 -2099197 - L1MC4 LINE L1 0 8042 7918 1429 257 52 55 chr10 138217628 138218207 -2098558 - L1MC4a LINE L1 -846 6962 6386 2383 313 60 30 chr10 138218238 138219227 -2097538 + L1MEc LINE L1 81 1040 -5356 207 69 0 0 chr10 138219227 138219256 -2097509 + (CA)n Simple_repeat Simple_repeat 2 30 0 2383 313 60 30 chr10 138219256 138219627 -2097138 + L1MEc LINE L1 1040 1492 -4904 1772 184 88 10 chr10 138219627 138220024 -2096741 - MSTB1 LTR MaLR 0 432 5 2383 313 60 30 chr10 138220024 138220175 -2096590 + L1MEc LINE L1 1492 1637 -4759 1329 279 76 57 chr10 138220179 138220585 -2096180 + L1ME1 LINE L1 5 433 -5637 2080 142 119 35 chr10 138220585 138220980 -2095785 - MSTA LTR MaLR 0 428 1 1329 279 76 57 chr10 138220980 138221340 -2095425 + L1ME1 LINE L1 433 785 -5285 * 3682 214 180 43 chr10 138221293 138221386 -2095379 - L1MCa LINE L1 -4444 1982 1903 2121 118 3 0 chr10 138221386 138221682 -2095083 - AluSp SINE Alu -11 302 6 3682 214 180 43 chr10 138221682 138223062 -2093703 - L1MCa LINE L1 -4523 1903 308 521 273 112 89 chr10 138223083 138223879 -2092886 + L1ME1 LINE L1 797 1610 -4470 451 237 79 7 chr10 138223884 138224023 -2092742 + L1MC3 LINE L1 6067 6215 -1570 3351 141 50 6 chr10 138224028 138224614 -2092151 - LTR38B LTR ERV1 0 611 3 605 210 76 170 chr10 138224617 138225040 -2091725 + L1MC3 LINE L1 6235 6617 -1191 566 299 28 47 chr10 138225081 138225292 -2091473 + MER63A DNA MER1_type 4 210 0 360 221 166 22 chr10 138225299 138225480 -2091285 + L1ME1 LINE L1 2657 2863 -3217 * 2579 232 113 65 chr10 138225470 138225869 -2090896 + L1ME1 LINE L1 3533 3911 -2169 4287 19 0 2 chr10 138225869 138226355 -2090410 + L1PA4 LINE L1 5667 6151 -4 2579 232 113 65 chr10 138226355 138227224 -2089541 + L1ME1 LINE L1 3911 4862 -1218 1337 213 56 53 chr10 138227257 138227530 -2089235 + L1ME1 LINE L1 5702 5978 -122 2047 141 0 0 chr10 138227530 138227834 -2088931 + AluSx SINE Alu 1 304 -8 1337 213 56 53 chr10 138227834 138227954 -2088811 + L1ME1 LINE L1 5978 6096 -4 221 232 23 45 chr10 138228911 138229088 -2087677 + (TATG)n Simple_repeat Simple_repeat 2 174 0 183 324 27 0 chr10 138230164 138230238 -2086527 + L2 LINE L2 2413 2488 -826 1268 148 34 8 chr10 138230240 138230477 -2086288 + MER4D LTR ERV1 505 747 -156 9055 20 0 14 chr10 138231451 138233309 -2083456 + L1PA2 LINE L1 4348 6155 0 1797 130 6 41 chr10 138234602 138234918 -2081847 + AluSx SINE Alu 1 305 -7 244 248 0 64 chr10 138236539 138236648 -2080117 + C-rich Low_complexity Low_complexity 6 107 0 193 169 34 0 chr10 138236706 138236765 -2080000 + G-rich Low_complexity Low_complexity 5 65 0 1768 127 0 58 chr10 138238535 138238843 -2077922 - AluSx SINE Alu -16 296 7 218 286 135 67 chr10 138239264 138239442 -2077323 - L2 LINE L2 -5 3267 3078 1088 254 38 21 chr10 138240120 138240484 -2076281 - MLT2D LTR ERVL 0 397 4 180 321 0 0 chr10 138241120 138241176 -2075589 - L2 LINE L2 -4 3309 3254 226 327 91 25 chr10 138241698 138241897 -2074868 + MIR SINE MIR 18 229 -33 1671 153 6 44 chr10 138242575 138242896 -2073869 - AluSx SINE Alu -3 309 1 606 204 79 26 chr10 138243310 138243462 -2073303 + MER95 LTR ERV 1 160 -271 301 241 74 37 chr10 138243493 138243655 -2073110 + MER95 LTR ERV 259 426 -5 191 272 239 0 chr10 138243730 138243822 -2072943 + L2 LINE L2 3196 3309 -4 675 274 22 0 chr10 138244920 138245099 -2071666 - MER53 DNA DNA 0 189 7 314 326 0 0 chr10 138245516 138245602 -2071163 - MIR SINE MIR 0 262 177 219 326 42 21 chr10 138245612 138245707 -2071058 - L2 LINE L2 0 3313 3217 487 197 34 0 chr10 138245780 138245897 -2070868 + MER53 DNA DNA 44 164 -25 392 312 0 2 chr10 138245916 138246046 -2070719 - MIR SINE MIR -79 129 2 267 321 209 5 chr10 138246060 138246275 -2070490 - L2 LINE L2 -84 3188 2930 288 279 0 0 chr10 138246306 138246367 -2070398 - MER45 DNA AcHobo -5 1576 1516 * 322 256 81 12 chr10 138246363 138246449 -2070316 - MER45 DNA AcHobo -835 118 27 376 325 74 39 chr10 138246508 138246791 -2069974 - L2 LINE L2 -511 2803 2511 341 242 55 97 chr10 138248068 138248233 -2068532 + MLT1I LTR MaLR 239 396 -13 364 330 26 89 chr10 138248879 138249070 -2067695 + L1M4 LINE L1 3777 3955 -2191 25 0 0 0 chr10 138250488 138250513 -2066252 + AT_rich Low_complexity Low_complexity 1 25 0 1616 173 117 23 chr10 138250854 138251196 -2065569 + MLT1A2 LTR MaLR 1 374 0 2746 91 0 0 chr10 138251321 138251674 -2065091 - THE1A LTR MaLR 0 355 3 11889 100 3 1 chr10 138251676 138253252 -2063513 - THE1A-int LTR MaLR 0 1580 1 2773 90 0 0 chr10 138253252 138253607 -2063158 - THE1A LTR MaLR 0 355 1 308 191 79 79 chr10 138254624 138254802 -2061963 + L1M4 LINE L1 4377 4554 -1592 695 289 72 12 chr10 138254858 138255190 -2061575 - L1ME4a LINE L1 -295 5826 5475 193 281 18 0 chr10 138255270 138255327 -2061438 + L2 LINE L2 3256 3313 0 223 326 35 0 chr10 138259278 138259364 -2057401 - L2 LINE L2 0 3313 3225 1236 195 10 80 chr10 138259586 138259888 -2056877 - AluJo SINE Alu -4 308 28 2290 171 29 5 chr10 138260044 138260454 -2056311 + MSTB LTR MaLR 7 426 0 658 327 125 33 chr10 138260454 138261151 -2055614 - L2 LINE L2 -785 2529 1769 1953 144 0 0 chr10 138262356 138262640 -2054125 + AluSq SINE Alu 15 298 -15 361 258 77 41 chr10 138263870 138264016 -2052749 + MLT1F1 LTR MaLR 27 166 -429 5947 30 0 3 chr10 138264016 138264713 -2052052 - L1PA4 LINE L1 0 6155 5461 361 258 77 41 chr10 138264713 138264838 -2051927 + MLT1F1 LTR MaLR 166 319 -276 187 111 22 22 chr10 138265188 138265233 -2051532 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 319 269 19 10 chr10 138265238 138265342 -2051423 + CT-rich Low_complexity Low_complexity 1 105 0 342 264 143 60 chr10 138265691 138266040 -2050725 - MLT1H1 LTR MaLR -177 378 1 1632 197 3 28 chr10 138266428 138266748 -2050017 + AluJo SINE Alu 1 312 0 23 33 0 0 chr10 138267137 138267167 -2049598 + AT_rich Low_complexity Low_complexity 1 30 0 336 64 0 0 chr10 138268679 138268726 -2048039 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr10 138268761 138268784 -2047981 + AT_rich Low_complexity Low_complexity 1 23 0 695 256 120 34 chr10 138268957 138269281 -2047484 + MLT1F LTR MaLR 1 363 -230 810 227 51 39 chr10 138269387 138269643 -2047122 + MLT1F1 LTR MaLR 309 567 0 537 283 98 78 chr10 138270316 138270815 -2045950 - MLT1H LTR MaLR -2 547 39 281 297 116 47 chr10 138270893 138271273 -2045492 + LTR33A LTR ERVL 71 476 -47 2018 124 0 46 chr10 138271819 138272125 -2044640 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr10 138273234 138273257 -2043508 + AT_rich Low_complexity Low_complexity 1 23 0 2271 88 0 67 chr10 138273569 138273898 -2042867 - AluSg SINE Alu -1 309 3 1402 215 16 70 chr10 138273988 138274374 -2042391 + MLT1A1 LTR MaLR 1 365 0 204 297 39 86 chr10 138274496 138274590 -2042175 + L2 LINE L2 3150 3238 -34 685 254 98 10 chr10 138274590 138274783 -2041982 - MER63A DNA MER1_type 0 210 1 204 297 39 86 chr10 138274783 138274816 -2041949 + L2 LINE L2 3238 3271 -1 2368 80 0 30 chr10 138275792 138276093 -2040672 + AluSg SINE Alu 4 295 -15 382 264 39 47 chr10 138277051 138277180 -2039585 - MIR SINE MIR -22 240 113 321 267 91 17 chr10 138277303 138277479 -2039286 - LTR16C LTR ERVL 0 491 303 234 236 0 0 chr10 138278030 138278085 -2038680 + GA-rich Low_complexity Low_complexity 3 57 0 2348 103 3 0 chr10 138280089 138280391 -2036374 - AluSg SINE Alu -7 303 1 2404 103 0 0 chr10 138280400 138280711 -2036054 - AluY SINE Alu 0 311 1 477 299 91 9 chr10 138281505 138281736 -2035029 - LTR16A LTR ERVL -199 251 2 551 234 46 62 chr10 138282479 138282751 -2034014 - MLT1D LTR MaLR -159 308 40 891 216 0 50 chr10 138282758 138283055 -2033710 - AluSq SINE Alu -1 312 31 192 324 27 0 chr10 138284122 138284196 -2032569 + L2 LINE L2 2413 2488 -826 1196 148 34 8 chr10 138284198 138284435 -2032330 + MER4D LTR ERV1 505 747 -156 1164 227 97 20 chr10 138285150 138285502 -2031263 - MSTC LTR MaLR 0 428 50 1310 177 64 0 chr10 138285537 138285802 -2030963 - MSTC-int LTR MaLR 0 1735 1454 417 271 0 8 chr10 138286670 138286914 -2029851 + (TG)n Simple_repeat Simple_repeat 1 241 0 607 284 19 0 chr10 138287922 138288084 -2028681 - MSTC-int LTR MaLR -1103 632 468 1418 287 19 0 chr10 138288201 138288630 -2028135 - MSTC-int LTR MaLR -1293 442 6 1558 184 112 31 chr10 138288638 138289030 -2027735 - MSTC LTR MaLR -2 426 3 240 253 11 35 chr10 138289575 138289662 -2027103 + GA-rich Low_complexity Low_complexity 2 86 0 278 243 299 0 chr10 138289765 138289872 -2026893 + MIR SINE MIR 98 236 -26 277 179 125 0 chr10 138294156 138294212 -2022553 + MER58 DNA MER1_type 22 84 -302 251 158 35 35 chr10 138295039 138295096 -2021669 - LTR33A LTR ERVL -2 521 465 265 241 14 0 chr10 138300168 138300248 -2016517 - L1ME2 LINE L1 -6 6160 6077 864 238 87 26 chr10 138300467 138300812 -2015953 - L1ME2 LINE L1 -290 5874 5509 211 247 27 14 chr10 138301387 138301460 -2015305 + (TTCA)n Simple_repeat Simple_repeat 2 75 0 267 295 0 0 chr10 138301492 138301570 -2015195 + (CAAT)n Simple_repeat Simple_repeat 4 81 0 180 297 0 0 chr10 138301582 138301656 -2015109 + T-rich Low_complexity Low_complexity 3 76 0 1295 205 44 107 chr10 138301667 138302155 -2014610 + MER31B LTR ERV1 5 656 -5 292 221 70 0 chr10 138302789 138302875 -2013890 + MER97c DNA MER1_type? 1 92 -998 605 243 29 40 chr10 138303153 138303326 -2013439 + MER92B LTR ERV1 120 290 -346 246 234 0 52 chr10 138303373 138303450 -2013315 + MER34B LTR ERV1 43 115 -450 789 228 81 75 chr10 138303902 138304249 -2012516 + MER92B LTR ERV1 288 636 0 180 97 0 0 chr10 138305534 138305565 -2011200 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 310 188 24 12 chr10 138308214 138308299 -2008466 + L1MC3 LINE L1 7012 7097 -688 390 207 0 23 chr10 138308299 138308386 -2008379 + MLT1F1 LTR MaLR 35 119 -448 1445 263 42 5 chr10 138308390 138308839 -2007926 + L1MD3 LINE L1 7404 7869 -126 899 267 74 44 chr10 138308859 138309333 -2007432 + MLT2B1 LTR ERVL 3 397 -17 210 206 0 0 chr10 138309333 138309401 -2007364 + (TA)n Simple_repeat Simple_repeat 1 68 0 201 74 0 0 chr10 138309400 138309427 -2007338 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 378 42 0 0 chr10 138309491 138309539 -2007226 + (TG)n Simple_repeat Simple_repeat 2 49 0 192 77 0 0 chr10 138309604 138309630 -2007135 + (TC)n Simple_repeat Simple_repeat 2 27 0 2014 195 47 14 chr10 138309694 138310187 -2006578 + L1MDa LINE L1 1697 2205 -4335 23 33 0 0 chr10 138310338 138310368 -2006397 + AT_rich Low_complexity Low_complexity 1 30 0 268 254 0 0 chr10 138310374 138310429 -2006336 + Tigger5 DNA MER2_type 1 55 -2268 * 339 243 0 0 chr10 138310401 138310471 -2006294 + Tigger5 DNA MER2_type 2254 2323 0 272 163 0 0 chr10 138310471 138310514 -2006251 + Tigger5 DNA MER2_type 13 55 -2268 566 130 11 0 chr10 138310519 138310611 -2006154 + Tigger5 DNA MER2_type 2231 2323 0 283 298 33 0 chr10 138310611 138310732 -2006033 + (TA)n Simple_repeat Simple_repeat 1 125 0 4752 249 56 54 chr10 138310739 138313046 -2003719 + L1MDa LINE L1 2337 4657 -1883 244 269 0 15 chr10 138314294 138314361 -2002404 - MIR SINE MIR -129 133 68 315 284 52 35 chr10 138314708 138314850 -2001915 + MIR SINE MIR 7 149 -71 1047 209 46 43 chr10 138315618 138315655 -2001110 - L1MC2 LINE L1 0 6344 6309 2080 141 7 0 chr10 138315655 138315954 -2000811 - AluSx SINE Alu -11 301 1 1047 209 46 43 chr10 138315954 138316241 -2000524 - L1MC2 LINE L1 -35 6309 6019 1100 272 25 6 chr10 138317778 138318102 -1998663 + L1MB8 LINE L1 5835 6164 -14 230 274 0 16 chr10 138318392 138318454 -1998311 + G-rich Low_complexity Low_complexity 2 62 0 22 0 0 0 chr10 138318477 138318499 -1998266 + AT_rich Low_complexity Low_complexity 1 22 0 422 246 47 16 chr10 138318987 138319155 -1997610 + MSTD LTR MaLR 3 175 -221 863 181 72 72 chr10 138319622 138319871 -1996894 + MSTD LTR MaLR 148 396 0 1993 141 3 3 chr10 138321133 138321152 -1995613 - AluSx SINE Alu -8 304 286 342 0 0 0 chr10 138321152 138321190 -1995575 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1993 141 3 3 chr10 138321190 138321468 -1995297 - AluSx SINE Alu -25 287 7 391 176 10 10 chr10 138321846 138321948 -1994817 + (TG)n Simple_repeat Simple_repeat 1 102 0 180 179 0 0 chr10 138322630 138322669 -1994096 + (TG)n Simple_repeat Simple_repeat 2 40 0 5036 146 21 22 chr10 138322669 138323572 -1993193 - MER4D LTR ERV1 0 903 2 324 0 0 0 chr10 138323572 138323608 -1993157 + (TG)n Simple_repeat Simple_repeat 1 36 0 1623 169 8 0 chr10 138324532 138324792 -1991973 - AluSx SINE Alu -11 301 40 319 252 75 9 chr10 138325824 138325931 -1990834 - L2 LINE L2 -8 3305 3192 2124 132 10 0 chr10 138329621 138329916 -1986849 - AluSx SINE Alu -12 300 3 1525 148 39 0 chr10 138330454 138330684 -1986081 + AluSx SINE Alu 1 239 -73 512 157 11 0 chr10 138331008 138331097 -1985668 + AluSg/x SINE Alu 211 300 -10 2205 112 28 0 chr10 138331935 138332221 -1984544 - AluSx SINE Alu -18 294 1 374 341 34 6 chr10 138333023 138333202 -1983563 + MIR SINE MIR 23 206 -56 241 238 64 49 chr10 138333462 138333609 -1983156 + MLT1I LTR MaLR 98 137 -272 1003 270 46 3 chr10 138333628 138333973 -1982792 - MER63C DNA MER1_type -496 434 75 387 358 97 40 chr10 138334049 138334205 -1982560 - L2 LINE L2 -23 3290 3144 2123 103 57 0 chr10 138334205 138334486 -1982279 + AluSx SINE Alu 1 297 -15 387 358 97 40 chr10 138334486 138335162 -1981603 - L2 LINE L2 -169 3144 2399 1928 273 82 48 chr10 138335305 138336281 -1980484 - L2 LINE L2 -1527 1787 779 985 169 0 0 chr10 138337837 138337985 -1978780 - AluJb SINE Alu -31 281 134 895 317 107 17 chr10 138338055 138338532 -1978233 - LTR33 LTR ERVL 0 521 2 1901 194 78 0 chr10 138338548 138338945 -1977820 + MSTA LTR MaLR 1 428 0 683 270 111 110 chr10 138338945 138340109 -1976656 - L2 LINE L2 -264 3049 1877 279 0 0 0 chr10 138341562 138341593 -1975172 + (TG)n Simple_repeat Simple_repeat 2 32 0 402 307 0 0 chr10 138342957 138343071 -1973694 + (CCTG)n Simple_repeat Simple_repeat 3 116 0 2400 79 0 0 chr10 138344162 138344454 -1972311 + AluY SINE Alu 1 292 -19 276 330 0 21 chr10 138344576 138344673 -1972092 + (TATATG)n Simple_repeat Simple_repeat 4 98 0 251 299 36 51 chr10 138345795 138345932 -1970833 + MER69 DNA AcHobo 64 198 -1028 1479 216 113 32 chr10 138346268 138346735 -1970030 - MLT1D LTR MaLR 0 505 1 404 270 99 45 chr10 138346836 138347169 -1969596 + MER69 DNA AcHobo 1846 2196 -330 401 215 90 73 chr10 138347214 138347391 -1969374 - MLT1A2 LTR MaLR 0 374 195 856 233 96 70 chr10 138347886 138348242 -1968523 + MLT1A1 LTR MaLR 1 365 0 231 325 84 0 chr10 138348245 138348328 -1968437 - MIR SINE MIR -151 111 22 3539 170 43 49 chr10 138349698 138350494 -1966271 - MER11C LTR ERVK -4 1067 277 880 257 46 46 chr10 138352104 138352602 -1964163 + Zaphod DNA AcHobo 512 1009 -3022 942 254 81 3 chr10 138352632 138352979 -1963786 + Zaphod DNA AcHobo 3630 4003 -28 203 71 24 24 chr10 138355288 138355330 -1961435 + (TTTG)n Simple_repeat Simple_repeat 2 176 0 592 141 43 0 chr10 138355330 138355422 -1961343 - AluSg/x SINE Alu -28 281 186 1155 291 103 7 chr10 138357643 138358069 -1958696 - MLT1C LTR MaLR 0 467 1 654 158 63 0 chr10 138361773 138361900 -1954865 + MER50 LTR ERV1 588 722 -12 417 271 0 8 chr10 138362574 138362818 -1953947 + (TG)n Simple_repeat Simple_repeat 1 241 0 584 260 63 77 chr10 138363049 138363414 -1953351 + L2 LINE L2 2913 3272 0 252 290 122 61 chr10 138364134 138364396 -1952369 - LTR33 LTR ERVL -233 288 11 1282 209 79 4 chr10 138365508 138365813 -1950952 - MLT1C LTR MaLR -1 466 131 320 311 44 22 chr10 138366596 138366779 -1949986 + L2 LINE L2 2836 3022 -250 248 211 127 0 chr10 138371291 138371362 -1945403 + MIR SINE MIR 30 109 -153 475 352 108 7 chr10 138374719 138375273 -1941492 + L1MC4a LINE L1 5293 5902 -1906 1140 151 99 22 chr10 138375492 138375724 -1941041 - MSTA LTR MaLR -178 250 1 1771 169 86 30 chr10 138376705 138377077 -1939688 - MSTD LTR MaLR -2 394 2 371 232 9 27 chr10 138377770 138378332 -1938433 + (TG)n Simple_repeat Simple_repeat 1 552 0 289 231 8 8 chr10 138378557 138378674 -1938091 + C-rich Low_complexity Low_complexity 3 119 0 512 217 17 0 chr10 138379130 138379245 -1937520 - L1MB4 LINE L1 -6 6174 6058 248 220 0 0 chr10 138379349 138379399 -1937366 - L1MB4 LINE L1 -77 6103 6054 345 314 0 49 chr10 138379740 138379785 -1936980 - MLT2B1 LTR ERVL 0 520 474 348 119 0 0 chr10 138379785 138379844 -1936921 + (TG)n Simple_repeat Simple_repeat 2 60 0 345 314 0 49 chr10 138379844 138379983 -1936782 - MLT2B1 LTR ERVL -46 474 345 679 302 61 3 chr10 138380609 138380920 -1935845 - MER69 DNA AcHobo -872 354 26 365 286 43 25 chr10 138381134 138381295 -1935470 - MLT1C LTR MaLR -6 461 298 384 194 18 53 chr10 138381296 138381466 -1935299 + CT-rich Low_complexity Low_complexity 1 164 0 34 79 0 0 chr10 138382716 138382792 -1933973 + GC_rich Low_complexity Low_complexity 1 76 0 811 267 31 16 chr10 138383104 138383359 -1933406 - MLT2B1 LTR ERVL -254 266 8 382 311 111 5 chr10 138384716 138384906 -1931859 - MER63A DNA MER1_type 0 210 1 355 306 102 20 chr10 138386372 138386519 -1930246 + MIR SINE MIR 45 203 -59 2377 82 0 0 chr10 138387140 138387446 -1929319 + AluY SINE Alu 6 311 0 1887 150 10 0 chr10 138387940 138388240 -1928525 + AluJo SINE Alu 7 309 -3 231 61 0 0 chr10 138389363 138389396 -1927369 + (GA)n Simple_repeat Simple_repeat 2 34 0 2157 99 0 0 chr10 138389396 138389678 -1927087 - AluSx SINE Alu -30 282 1 21 0 0 0 chr10 138389680 138389701 -1927064 + AT_rich Low_complexity Low_complexity 1 21 0 2305 106 0 0 chr10 138391809 138392120 -1924645 + AluSx SINE Alu 1 311 -1 508 242 5 84 chr10 138392388 138392457 -1924308 - MIR SINE MIR -3 259 186 1538 159 83 7 chr10 138392457 138392747 -1924018 - AluSx SINE Alu 0 312 1 508 242 5 84 chr10 138392747 138392867 -1923898 - MIR SINE MIR -76 186 85 224 385 16 25 chr10 138393131 138393253 -1923512 + MIR SINE MIR 21 141 -121 1479 207 67 90 chr10 138394167 138394645 -1922120 + MLT1C LTR MaLR 1 467 0 461 262 0 0 chr10 138394976 138395079 -1921686 + Ricksha DNA DNA 1 103 -1151 1725 194 58 6 chr10 138395245 138395606 -1921159 + Ricksha DNA DNA 2860 3239 -7 1476 231 89 5 chr10 138398599 138399005 -1917760 + LTR53 LTR ERVL 2 441 -78 339 288 143 58 chr10 138399974 138400261 -1916504 + MLT1H1 LTR MaLR 1 262 -293 2115 90 28 0 chr10 138400261 138400550 -1916215 + AluY SINE Alu 1 297 -14 180 0 0 0 chr10 138400550 138400570 -1916195 + (GA)n Simple_repeat Simple_repeat 2 21 0 339 288 143 58 chr10 138400570 138400828 -1915937 + MLT1H1 LTR MaLR 261 555 0 24 67 0 0 chr10 138402734 138402779 -1913986 + AT_rich Low_complexity Low_complexity 1 45 0 2075 198 87 45 chr10 138403455 138403568 -1913197 + L1MA9 LINE L1 5713 5820 -492 2048 118 0 0 chr10 138403568 138403857 -1912908 + AluY SINE Alu 6 294 -17 2075 198 87 45 chr10 138403857 138404247 -1912518 + L1MA9 LINE L1 5820 6246 -66 2106 86 4 0 chr10 138404247 138404569 -1912196 + AluSc SINE Alu 1 323 0 2075 198 87 45 chr10 138404569 138404639 -1912126 + L1MA9 LINE L1 6246 6312 0 254 364 45 0 chr10 138406218 138406328 -1910437 - MIR SINE MIR -109 153 39 195 225 0 0 chr10 138406522 138406593 -1910172 + (TG)n Simple_repeat Simple_repeat 2 72 0 2587 112 3 24 chr10 138406709 138407092 -1909673 - THE1C LTR MaLR 0 375 1 2442 171 48 0 chr10 138407330 138407751 -1909014 - L1PA15 LINE L1 -2 6163 5723 1176 293 46 54 chr10 138408040 138409345 -1907420 + L1ME3A LINE L1 4613 5906 -264 288 274 59 54 chr10 138409348 138409534 -1907231 + MLT1G LTR MaLR 2 188 -402 * 291 212 283 0 chr10 138409533 138409632 -1907133 - MLT1G LTR MaLR -5 585 459 469 317 59 4 chr10 138409804 138410038 -1906727 + L1ME3A LINE L1 5913 6162 -2 330 245 200 20 chr10 138410046 138410235 -1906530 - MIR SINE MIR -3 259 28 472 318 68 18 chr10 138410276 138410637 -1906128 + L1ME LINE L1 5329 5679 -442 197 86 57 0 chr10 138410689 138410724 -1906041 + GA-rich Low_complexity Low_complexity 4 40 0 471 218 0 0 chr10 138410757 138410844 -1905921 + FLAM_A SINE Alu 3 89 -53 22 70 0 0 chr10 138411186 138411229 -1905536 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 138411419 138411447 -1905318 + AT_rich Low_complexity Low_complexity 1 28 0 356 65 0 0 chr10 138411659 138411705 -1905060 - L1PA15 LINE L1 -542 5621 5576 328 288 5 13 chr10 138412648 138413082 -1903683 + (CA)n Simple_repeat Simple_repeat 1 430 0 2141 270 81 21 chr10 138414286 138415039 -1901726 + L1MC3 LINE L1 1 798 -5247 * 8688 229 80 59 chr10 138415009 138417332 -1899433 + L1MC3 LINE L1 2474 4747 -3456 889 181 0 6 chr10 138417332 138417498 -1899267 + AluSp SINE Alu 137 301 -12 8688 229 80 59 chr10 138417498 138420245 -1896520 + L1MC3 LINE L1 4747 7435 -768 857 30 0 0 chr10 138420245 138420344 -1896421 + L1PA4 LINE L1 6049 6147 -8 8688 229 80 59 chr10 138420344 138420375 -1896390 + L1MC3 LINE L1 7435 7464 -739 1852 77 40 0 chr10 138420375 138420649 -1896116 + L1MA5A LINE L1 6009 6293 -4 8688 229 80 59 chr10 138420649 138420995 -1895770 + L1MC3 LINE L1 7464 8202 -1 306 342 107 22 chr10 138421023 138421248 -1895517 - MIR SINE MIR -10 252 9 232 255 0 0 chr10 138421394 138421441 -1895324 + (CA)n Simple_repeat Simple_repeat 2 48 0 585 261 33 7 chr10 138425090 138425243 -1891522 - MER58A DNA MER1_type 0 158 2 2069 143 0 0 chr10 138425884 138426192 -1890573 + AluSx SINE Alu 1 308 -4 741 248 96 4 chr10 138426199 138426460 -1890305 + MLT1C LTR MaLR 199 467 0 279 264 14 0 chr10 138427503 138427575 -1889190 - L2 LINE L2 -1 3312 3240 1969 141 10 0 chr10 138427596 138427895 -1888870 + AluSq SINE Alu 1 302 -11 182 227 30 45 chr10 138427900 138427966 -1888799 + L2 LINE L2 2889 2953 -360 1806 245 47 16 chr10 138428438 138428923 -1887842 - MLT1D LTR MaLR -2 503 4 466 344 0 0 chr10 138428954 138429134 -1887631 + C-rich Low_complexity Low_complexity 1 180 0 4972 96 14 12 chr10 138429393 138430121 -1886644 + L1PB1 LINE L1 5423 6151 0 3538 200 30 11 chr10 138430155 138431025 -1885740 + L1 LINE L1 2876 3761 -2385 482 264 52 7 chr10 138433743 138433898 -1882867 - MIR3 SINE MIR -11 197 36 308 284 188 20 chr10 138434601 138434798 -1881967 - MIR SINE MIR 0 262 33 2687 20 0 0 chr10 138434993 138435297 -1881468 - L1PA4 LINE L1 0 6155 5852 201 224 0 0 chr10 138435719 138435777 -1880988 + (TG)n Simple_repeat Simple_repeat 2 59 0 472 313 101 65 chr10 138436510 138436944 -1879821 + L1MEd LINE L1 1052 1501 -4915 1508 195 83 45 chr10 138436945 138437016 -1879749 - MLT1B LTR MaLR 0 390 323 3777 59 2 4 chr10 138437016 138437494 -1879271 - L1PA7 LINE L1 0 6154 5678 1508 195 83 45 chr10 138437494 138437797 -1878968 - MLT1B LTR MaLR -67 323 2 359 235 81 31 chr10 138437802 138438031 -1878734 + L1MEd LINE L1 1330 1773 -4784 457 212 93 36 chr10 138438249 138438442 -1878323 - L1MC4a LINE L1 -1403 6405 6202 250 200 12 50 chr10 138438516 138438596 -1878169 - L1MC4a LINE L1 -1746 6062 5986 189 147 0 0 chr10 138438602 138438636 -1878129 + (TCCCC)n Simple_repeat Simple_repeat 5 38 0 3356 169 24 6 chr10 138438645 138439266 -1877499 - L1PB4 LINE L1 -1 6155 5524 1457 107 36 0 chr10 138439274 138439498 -1877267 + AluSq SINE Alu 1 232 -81 250 302 17 26 chr10 138439654 138439770 -1876995 + CT-rich Low_complexity Low_complexity 5 119 0 1483 182 14 0 chr10 138439980 138440260 -1876505 - AluSx SINE Alu -28 284 1 836 141 82 12 chr10 138440261 138440431 -1876334 - L1PB4 LINE L1 -657 5499 5318 1646 154 48 3 chr10 138440433 138440726 -1876039 - AluSx SINE Alu -6 306 1 210 287 22 39 chr10 138440989 138441170 -1875595 + GA-rich Low_complexity Low_complexity 2 179 0 350 157 0 49 chr10 138441345 138441447 -1875318 + CT-rich Low_complexity Low_complexity 4 100 0 547 245 157 69 chr10 138441480 138441800 -1874965 - L1MDa LINE L1 -2887 3328 2962 2184 57 3 11 chr10 138441800 138442118 -1874647 - AluY SINE Alu 0 316 1 547 245 157 69 chr10 138442118 138442204 -1874561 - L1MDa LINE L1 -3253 2962 2885 335 324 14 0 chr10 138442209 138442357 -1874408 - L1MDa LINE L1 -3320 2895 2746 400 288 69 43 chr10 138442530 138442854 -1873911 - L1MDa LINE L1 -3816 2399 2108 228 306 134 36 chr10 138443071 138443407 -1873358 - HAL1b LINE L1 -501 847 479 369 280 100 86 chr10 138443699 138444084 -1872681 - L1MEc LINE L1 -2868 3347 970 214 197 0 49 chr10 138444594 138444655 -1872110 + T-rich Low_complexity Low_complexity 3 60 0 917 293 42 39 chr10 138444995 138445404 -1871361 + L1ME1 LINE L1 5747 6156 -10 327 271 39 58 chr10 138445419 138445574 -1871191 + L1MEc LINE L1 1633 1784 -4612 1297 277 80 36 chr10 138445950 138446653 -1870112 + HAL1b LINE L1 552 1285 -63 272 276 179 21 chr10 138446774 138446919 -1869846 - MIR SINE MIR -75 187 20 439 295 218 23 chr10 138446969 138447617 -1869148 - LTR50 LTR ERVL -1 794 21 629 130 0 9 chr10 138448588 138448696 -1868069 + (GGAA)n Simple_repeat Simple_repeat 4 110 0 228 296 61 31 chr10 138448696 138448794 -1867971 + MIR SINE MIR 20 120 -88 2060 102 16 19 chr10 138449186 138449500 -1867265 + AluSp SINE Alu 1 313 0 1041 241 125 65 chr10 138451216 138451276 -1865489 - MLT2B2 LTR ERVL 0 515 460 192 77 0 0 chr10 138451276 138451302 -1865463 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 1041 241 125 65 chr10 138451302 138451714 -1865051 - MLT2B2 LTR ERVL -55 460 15 190 326 130 22 chr10 138451931 138452069 -1864696 + MIR SINE MIR 109 261 -1 568 279 73 33 chr10 138452477 138452749 -1864016 + MLT1I LTR MaLR 106 388 -21 396 274 10 0 chr10 138453917 138454019 -1862746 + MIR SINE MIR 33 135 -73 2115 132 16 44 chr10 138457606 138457992 -1858773 - THE1C LTR MaLR 0 375 1 791 153 0 0 chr10 138458240 138458358 -1858407 + FLAM_C SINE Alu 1 118 -15 193 314 133 0 chr10 138458920 138459025 -1857740 + L2 LINE L2 2382 2500 -814 209 299 29 121 chr10 138459273 138459375 -1857390 + L2 LINE L2 2829 2939 -333 213 94 0 0 chr10 138459375 138459407 -1857358 + (CA)n Simple_repeat Simple_repeat 2 33 0 222 37 0 0 chr10 138459416 138459443 -1857322 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 209 299 29 121 chr10 138459443 138459457 -1857308 + L2 LINE L2 2947 2961 -311 1698 138 0 28 chr10 138459457 138459704 -1857061 - AluSx SINE Alu -72 240 1 209 299 29 121 chr10 138459704 138459890 -1856875 + L2 LINE L2 2961 3113 -159 243 357 49 15 chr10 138461241 138461507 -1855258 + L2 LINE L2 2686 2960 -354 593 231 211 15 chr10 138461552 138461812 -1854953 + LTR50 LTR ERVL 485 795 0 321 277 25 114 chr10 138462232 138462434 -1854331 + ERVL LTR ERVL 510 693 -5071 273 317 53 62 chr10 138462542 138462785 -1853980 + ERVL LTR ERVL 749 989 -4496 203 161 0 0 chr10 138463011 138463042 -1853723 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 1915 327 50 18 chr10 138463285 138464727 -1852038 + ERVL LTR ERVL 1467 3005 -2525 708 303 18 21 chr10 138464806 138465090 -1851675 - MER41E LTR ERV1 -4 508 226 792 225 56 0 chr10 138465445 138465623 -1851142 - MER5A DNA MER1_type -1 188 1 1626 173 129 65 chr10 138465689 138466122 -1850643 - MLT1C LTR MaLR -4 463 3 2081 144 36 30 chr10 138466155 138466517 -1850248 - THE1B LTR MaLR 0 364 1 2111 311 78 19 chr10 138466586 138467824 -1848941 + ERVL LTR ERVL 3523 4832 -932 1116 261 47 29 chr10 138467834 138468217 -1848548 - MSTD LTR MaLR -6 390 1 446 333 24 58 chr10 138468240 138468570 -1848195 + ERVL LTR ERVL 4944 5262 -502 550 217 39 0 chr10 138468718 138468854 -1847911 - MLT1D LTR MaLR -309 196 41 304 311 10 0 chr10 138468864 138468967 -1847798 + MLT1D LTR MaLR 402 505 0 207 343 10 20 chr10 138472839 138472938 -1843827 - MIR3 SINE MIR -26 182 85 255 331 54 23 chr10 138473270 138473400 -1843365 + MIR SINE MIR 9 142 -120 552 283 92 0 chr10 138473632 138473805 -1842960 + MIR SINE MIR 40 228 -34 511 215 101 0 chr10 138474689 138474847 -1841918 - LTR50 LTR ERVL -278 517 344 231 300 85 0 chr10 138475823 138475953 -1840812 - L1M4 LINE L1 -818 5328 5188 214 341 85 23 chr10 138476333 138476462 -1840303 - MIR SINE MIR 0 262 126 363 23 0 0 chr10 138476990 138477034 -1839731 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 0 0 0 chr10 138477033 138477058 -1839707 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 58 0 0 chr10 138477057 138477109 -1839656 + (TGGA)n Simple_repeat Simple_repeat 2 53 0 2266 173 26 14 chr10 138477111 138477532 -1839233 + MSTB LTR MaLR 1 426 0 315 190 51 25 chr10 138478063 138478221 -1838544 + (TATAA)n Simple_repeat Simple_repeat 1 162 0 292 341 79 0 chr10 138478253 138478379 -1838386 - L2 LINE L2 -25 3247 3112 2005 108 117 18 chr10 138478903 138479244 -1837521 - THE1C LTR MaLR 0 375 1 216 274 7 14 chr10 138480154 138480306 -1836459 + GA-rich Low_complexity Low_complexity 1 150 0 247 209 60 0 chr10 138480875 138480942 -1835823 + L1MD3 LINE L1 7925 7995 0 198 270 0 0 chr10 138481186 138481260 -1835505 + (CA)n Simple_repeat Simple_repeat 1 74 0 852 258 52 9 chr10 138482874 138483107 -1833658 + MER46C DNA MER2_type 2 244 -94 438 20 0 0 chr10 138483768 138483819 -1832946 + (CA)n Simple_repeat Simple_repeat 1 51 0 741 208 20 15 chr10 138484324 138484526 -1832239 - MER6 DNA MER2_type -4 861 659 366 181 0 28 chr10 138484539 138484611 -1832154 + AluJb SINE Alu 40 109 -193 1342 206 68 45 chr10 138485639 138485994 -1830771 + MLT1A1 LTR MaLR 1 363 -2 1916 134 0 4 chr10 138486097 138486365 -1830400 + AluSx SINE Alu 1 267 -45 314 311 41 8 chr10 138488680 138488802 -1827963 + MER5B DNA MER1_type 51 176 -2 1815 148 7 0 chr10 138489732 138490010 -1826755 + AluSx SINE Alu 1 280 -32 220 291 86 26 chr10 138494628 138494745 -1822020 - MIR3 SINE MIR -9 199 76 233 372 18 0 chr10 138495655 138495768 -1820997 + MLT1I LTR MaLR 288 402 -7 246 172 31 31 chr10 138497048 138497112 -1819653 - L1MC/D LINE L1 -2339 5469 5406 408 263 88 14 chr10 138497130 138497418 -1819347 - L1ME2 LINE L1 -10 6160 5842 1547 64 5 0 chr10 138497418 138497606 -1819159 - AluSp SINE Alu -124 189 1 2793 183 32 27 chr10 138497606 138498330 -1818435 - L1MB8 LINE L1 -285 6704 5976 2060 128 21 3 chr10 138498330 138498620 -1818145 - AluSc SINE Alu -9 300 6 2793 183 32 27 chr10 138498620 138498717 -1818048 - L1MB8 LINE L1 -1013 5976 5881 2882 278 72 12 chr10 138498732 138499963 -1816802 - L1MB8 LINE L1 -2378 4579 3275 631 251 70 65 chr10 138499979 138500409 -1816356 - L1MB8 LINE L1 -3749 3220 2812 * 1954 240 93 64 chr10 138500407 138500710 -1816055 - L1MB8 LINE L1 -4762 2197 1904 2016 135 3 3 chr10 138500710 138501014 -1815751 - AluSx SINE Alu 0 304 1 1954 240 93 64 chr10 138501014 138502090 -1814675 - L1MB8 LINE L1 -5055 1904 812 204 291 67 75 chr10 138502645 138502779 -1813986 + L2 LINE L2 3181 3313 0 184 377 65 7 chr10 138504079 138504217 -1812548 + L2 LINE L2 3126 3271 -1 233 297 149 0 chr10 138505004 138505078 -1811687 - MIR SINE MIR -120 142 58 2057 236 98 19 chr10 138505838 138506453 -1810312 - L1MC3 LINE L1 0 7785 7123 454 217 79 138 chr10 138506505 138506694 -1810071 + MLT1D LTR MaLR 210 502 -3 3664 217 39 45 chr10 138506704 138507721 -1809044 - L1MC3 LINE L1 -767 7018 6008 241 254 16 0 chr10 138507724 138507787 -1808978 - L1MC2 LINE L1 -273 6071 6008 243 270 16 0 chr10 138507790 138507853 -1808912 - L1MC2 LINE L1 -273 6071 6008 243 222 16 0 chr10 138507856 138507919 -1808846 - L1MC2 LINE L1 -273 6071 6008 302 254 16 0 chr10 138507922 138507985 -1808780 - L1MC2 LINE L1 -273 6071 6008 235 238 16 0 chr10 138507988 138508051 -1808714 - L1MC2 LINE L1 -273 6071 6008 252 222 16 0 chr10 138508054 138508117 -1808648 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 138508186 138508249 -1808516 - L1MC2 LINE L1 -273 6071 6008 250 222 16 0 chr10 138508252 138508315 -1808450 - L1MC2 LINE L1 -273 6071 6008 232 254 16 0 chr10 138508318 138508381 -1808384 - L1MC2 LINE L1 -273 6071 6008 317 238 16 0 chr10 138508384 138508447 -1808318 - L1MC2 LINE L1 -273 6071 6008 265 222 16 0 chr10 138508450 138508513 -1808252 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 138508516 138508579 -1808186 - L1MC2 LINE L1 -273 6071 6008 277 206 16 0 chr10 138508582 138508645 -1808120 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 138508648 138508711 -1808054 - L1MC2 LINE L1 -273 6071 6008 276 206 16 0 chr10 138508714 138508777 -1807988 - L1MC2 LINE L1 -273 6071 6008 2882 201 17 45 chr10 138508780 138509467 -1807298 - L1MC2 LINE L1 -273 6071 5403 1887 171 3 3 chr10 138509467 138509760 -1807005 + AluJo SINE Alu 1 293 -19 2882 201 17 45 chr10 138509760 138509779 -1806986 - L1MC2 LINE L1 -941 5403 5385 821 127 0 0 chr10 138509779 138509897 -1806868 - AluSg/x SINE Alu -2 310 193 631 184 22 8 chr10 138509897 138510066 -1806699 - L1MC2 LINE L1 -744 5402 5231 2658 239 56 6 chr10 138510171 138510977 -1805788 - L1MC2 LINE L1 -874 5272 4427 338 222 0 28 chr10 138511464 138511536 -1805229 - MLT2E LTR ERVL -512 116 47 302 244 9 4 chr10 138514368 138514600 -1802165 + (TG)n Simple_repeat Simple_repeat 1 233 0 222 236 12 6 chr10 138514633 138514794 -1801971 + (TG)n Simple_repeat Simple_repeat 1 162 0 322 220 14 0 chr10 138514859 138515000 -1801765 + (TG)n Simple_repeat Simple_repeat 1 143 0 383 225 19 4 chr10 138515015 138515282 -1801483 + (TG)n Simple_repeat Simple_repeat 1 271 0 355 230 7 25 chr10 138515317 138515757 -1801008 + (TG)n Simple_repeat Simple_repeat 1 432 0 215 224 9 0 chr10 138515795 138515902 -1800863 + (TG)n Simple_repeat Simple_repeat 1 108 0 449 234 9 17 chr10 138515923 138516286 -1800479 + (TG)n Simple_repeat Simple_repeat 1 360 0 275 305 158 25 chr10 138517612 138517815 -1798950 - LTR33 LTR ERVL 0 521 292 233 341 0 0 chr10 138519959 138520085 -1796680 + CT-rich Low_complexity Low_complexity 3 128 0 332 182 0 106 chr10 138520103 138520301 -1796464 + CT-rich Low_complexity Low_complexity 3 179 0 236 311 81 0 chr10 138523475 138523549 -1793216 + MLT1I LTR MaLR 318 397 -12 1071 220 168 10 chr10 138523781 138524167 -1792598 - MER31B LTR ERV1 -19 447 1 550 297 10 47 chr10 138524633 138524825 -1791940 - MER5A DNA MER1_type -2 187 3 213 154 0 0 chr10 138525133 138525172 -1791593 + (CA)n Simple_repeat Simple_repeat 1 39 0 340 244 199 32 chr10 138525746 138525902 -1790863 - MIR SINE MIR -80 182 1 319 323 106 20 chr10 138526199 138526397 -1790368 + MIR SINE MIR 31 245 -17 745 308 94 25 chr10 138527213 138527810 -1788955 - MLT2F LTR ERVL -9 654 17 183 80 0 0 chr10 138528047 138528072 -1788693 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1982 170 37 32 chr10 138528373 138528908 -1787857 - MLT2A2 LTR ERVL -15 539 1 1056 319 100 55 chr10 138529647 138530485 -1786280 + L1 LINE L1 3117 3992 -2154 707 349 39 34 chr10 138530536 138530951 -1785814 + L1 LINE L1 4066 4482 -1664 235 382 24 18 chr10 138532199 138532369 -1784396 + MIR3 SINE MIR 31 201 -7 1984 141 18 0 chr10 138532833 138533117 -1783648 - AluSx SINE Alu -13 299 11 238 319 121 25 chr10 138533129 138533286 -1783479 + L2 LINE L2 2520 2691 -623 229 191 191 29 chr10 138533329 138533434 -1783331 - LTR16A LTR ERVL -75 375 254 213 263 50 38 chr10 138535931 138536011 -1780754 - L2 LINE L2 -228 3044 2964 187 304 0 0 chr10 138536153 138536199 -1780566 - MIR SINE MIR -55 153 108 412 349 130 18 chr10 138536754 138537084 -1779681 + L3 LINE CR1 1178 1544 -33 1302 196 71 46 chr10 138537380 138537747 -1779018 + L1MA9 LINE L1 5899 6274 -38 195 241 37 0 chr10 138537887 138537941 -1778824 - MIR SINE MIR -78 184 129 1850 136 63 41 chr10 138538084 138538451 -1778314 + THE1C LTR MaLR 1 375 0 183 313 127 40 chr10 138540063 138540213 -1776552 + MER5B DNA MER1_type 5 167 -11 248 270 22 56 chr10 138540291 138540380 -1776385 - MER5A DNA MER1_type -90 99 14 23 54 0 0 chr10 138541518 138541555 -1775210 + AT_rich Low_complexity Low_complexity 1 37 0 225 254 32 0 chr10 138541863 138541926 -1774839 + L2 LINE L2 3248 3312 -1 2198 105 0 46 chr10 138541936 138542261 -1774504 - AluSx SINE Alu -2 310 1 250 333 44 0 chr10 138542813 138542927 -1773838 + MIR SINE MIR 143 261 -1 188 331 126 24 chr10 138543041 138543168 -1773597 - MIR SINE MIR -22 240 101 358 350 133 34 chr10 138543199 138543493 -1773272 - L2 LINE L2 -3 3310 2988 449 128 0 0 chr10 138543526 138543604 -1773161 - L1PA6 LINE L1 -1 6153 6076 602 184 6 74 chr10 138543605 138543768 -1772997 + L1MD1 LINE L1 6085 6236 -6 235 311 22 11 chr10 138543771 138543861 -1772904 + (TATG)n Simple_repeat Simple_repeat 1 91 0 187 297 27 0 chr10 138543995 138544069 -1772696 + L2 LINE L2 2046 2121 -1193 492 321 230 8 chr10 138544089 138544562 -1772203 + L2 LINE L2 2259 2836 -478 292 289 91 48 chr10 138544563 138544750 -1772015 + L2 LINE L2 2780 2964 -308 217 214 0 0 chr10 138544741 138544783 -1771982 - L2 LINE L2 -3 3310 3269 * 1526 240 26 15 chr10 138544795 138545186 -1771579 - L1ME1 LINE L1 -339 5827 5433 1433 106 5 14 chr10 138545556 138545773 -1770992 + L1PA5 LINE L1 5940 6154 0 253 203 16 31 chr10 138546849 138546913 -1769852 + L2 LINE L2 3209 3271 -1 995 245 69 42 chr10 138548019 138548354 -1768411 - MER2 DNA MER2_type 0 344 1 206 348 159 10 chr10 138548942 138549149 -1767616 + L2 LINE L2 2432 2669 -645 209 297 14 40 chr10 138549319 138549393 -1767372 - MIR SINE MIR -87 175 104 284 352 155 23 chr10 138549493 138549803 -1766962 + L2 LINE L2 2920 3270 -2 183 309 0 85 chr10 138550988 138551082 -1765683 - L2 LINE L2 -307 2965 2880 452 274 63 0 chr10 138552290 138552465 -1764300 - LTR16A1 LTR ERVL -10 447 262 2130 55 34 94 chr10 138552827 138553155 -1763610 + AluY SINE Alu 1 308 -3 2272 117 7 0 chr10 138554651 138554951 -1761814 - AluSq SINE Alu -11 302 1 1228 200 125 0 chr10 138607790 138608095 -1708670 - MER54A LTR ERVL -558 343 1 1022 245 110 57 chr10 138611328 138611756 -1705009 + MER31B LTR ERV1 6 651 -10 856 196 52 0 chr10 138611772 138611945 -1704820 + MER20 DNA MER1_type 6 187 -32 198 171 0 0 chr10 138613095 138613136 -1703629 + (TG)n Simple_repeat Simple_repeat 1 41 0 273 333 60 0 chr10 138614255 138614372 -1702393 + MIR3 SINE MIR 75 198 -10 595 250 28 11 chr10 138614391 138614567 -1702198 - L3 LINE CR1 -801 776 598 283 355 0 9 chr10 138615072 138615182 -1701583 + MER21B LTR ERV1 1 109 -754 1555 261 47 55 chr10 138615240 138615864 -1700901 + MER21B LTR ERV1 136 754 -109 422 251 142 53 chr10 138616127 138616593 -1700172 - L2 LINE L2 -91 3222 2709 1973 137 7 0 chr10 138617411 138617711 -1699054 + AluSx SINE Alu 1 302 -10 342 294 78 33 chr10 138618464 138618644 -1698121 + LTR43 LTR ERV1 189 376 -226 2351 65 10 0 chr10 138618996 138619289 -1697476 - AluY SINE Alu -15 296 1 645 195 8 0 chr10 138619424 138619547 -1697218 + AluSg/x SINE Alu 184 307 -5 190 290 159 9 chr10 138619734 138619841 -1696924 + L2 LINE L2 3190 3312 -1 1121 307 106 53 chr10 138621239 138621557 -1695208 + L1M2 LINE L1 1756 2056 -4792 1903 166 0 0 chr10 138621557 138621855 -1694910 + AluSx SINE Alu 1 301 -11 184 30 61 0 chr10 138621855 138621888 -1694877 + (TTAAA)n Simple_repeat Simple_repeat 2 36 0 1121 307 106 53 chr10 138621896 138622144 -1694621 + L1M2 LINE L1 2056 2290 -4558 2285 82 0 3 chr10 138622144 138622449 -1694316 + AluY SINE Alu 1 304 -7 1121 307 106 53 chr10 138622449 138622761 -1694004 + L1M2 LINE L1 2290 5842 -1006 652 293 75 40 chr10 138622804 138623179 -1693586 + L1MC/D LINE L1 5353 5740 -2068 457 334 77 70 chr10 138623495 138623938 -1692827 + L1MC4 LINE L1 7595 8040 -2 2776 216 33 15 chr10 138624995 138625601 -1691164 - LTR35 LTR ERV1 0 618 2 983 289 44 109 chr10 138625916 138626487 -1690278 - MER21B LTR ERV1 -237 626 93 3102 152 58 58 chr10 138626495 138626681 -1690084 - LTR26E LTR ERV1 -4 618 433 1462 211 3 7 chr10 138626681 138626984 -1689781 + AluJo SINE Alu 1 302 -10 3102 152 58 58 chr10 138626984 138627415 -1689350 - LTR26E LTR ERV1 -188 434 1 1551 145 86 10 chr10 138627425 138627729 -1689036 + MER4D LTR ERV1 60 386 -517 203 213 0 16 chr10 138628228 138628289 -1688476 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 235 15 29 chr10 138629686 138629754 -1687011 + (CAGGG)n Simple_repeat Simple_repeat 3 69 0 1507 194 31 4 chr10 138632283 138632623 -1684142 + MLT1A1 LTR MaLR 1 353 -12 281 349 27 14 chr10 138632635 138632781 -1683984 + L2 LINE L2 3165 3312 -1 480 327 44 6 chr10 138633353 138633512 -1683253 + MIR SINE MIR 32 196 -66 433 264 63 13 chr10 138633629 138633788 -1682977 - MLT1G1 LTR MaLR 0 595 429 * 507 237 92 66 chr10 138633779 138634085 -1682680 - MLT1G1 LTR MaLR -239 316 37 351 121 0 0 chr10 138634680 138634738 -1682027 + (A)n Simple_repeat Simple_repeat 1 58 0 639 328 92 9 chr10 138636138 138636605 -1680160 - LTR33 LTR ERVL -7 514 9 361 276 92 25 chr10 138637778 138637974 -1678791 - ERVL LTR ERVL -1565 4199 3991 461 321 17 50 chr10 138638796 138639098 -1677667 + LTR41 LTR ERVL 464 755 -18 297 288 36 18 chr10 138639762 138639873 -1676892 - MIR SINE MIR -62 146 34 231 146 0 0 chr10 138641084 138641125 -1675640 + (GGCTG)n Simple_repeat Simple_repeat 3 43 0 367 234 196 38 chr10 138641788 138641972 -1674793 - MER20 DNA MER1_type -6 213 1 274 86 0 0 chr10 138642370 138642405 -1674360 - Alu SINE Alu -36 266 232 1371 115 5 0 chr10 138642510 138642728 -1674037 + AluSq SINE Alu 94 312 0 1866 151 0 35 chr10 138643546 138643865 -1672900 + AluSx SINE Alu 1 308 -4 710 307 57 14 chr10 138643891 138644193 -1672572 + L1MC/D LINE L1 860 1177 -5369 252 250 87 11 chr10 138644165 138644257 -1672508 + L1MC/D LINE L1 5470 5568 -1076 * 770 247 7 12 chr10 138644238 138644444 -1672321 + L1MB4 LINE L1 5993 6188 0 568 333 129 27 chr10 138644555 138644958 -1671807 + L1MC/D LINE L1 5846 6289 -2017 816 183 0 0 chr10 138645235 138645460 -1671305 + (TG)n Simple_repeat Simple_repeat 1 225 0 264 271 119 59 chr10 138648440 138648676 -1668089 - MLT2F LTR ERVL -141 522 273 280 349 111 19 chr10 138650457 138650764 -1666001 + L2 LINE L2 2908 3242 -30 398 189 24 24 chr10 138651409 138651536 -1665229 + CT-rich Low_complexity Low_complexity 3 129 0 231 203 0 0 chr10 138655723 138655792 -1660973 + CT-rich Low_complexity Low_complexity 1 69 0 371 250 24 0 chr10 138656316 138656480 -1660285 + GA-rich Low_complexity Low_complexity 3 170 0 184 382 61 0 chr10 138656648 138656779 -1659986 - L2 LINE L2 -1 3271 3133 827 119 0 50 chr10 138657167 138657387 -1659378 + (CA)n Simple_repeat Simple_repeat 1 208 0 1882 236 71 65 chr10 138657869 138658559 -1658206 + LTR8A LTR ERV1 34 727 0 1084 189 26 22 chr10 138660467 138660737 -1656028 - MER33 DNA MER1_type -20 304 34 642 109 0 0 chr10 138660940 138661032 -1655733 + LTR7 LTR ERV1 1 92 -358 940 63 0 8 chr10 138661063 138661190 -1655575 + LTR7 LTR ERV1 325 450 0 3188 148 23 11 chr10 138661344 138661905 -1654860 + MER4D LTR ERV1 336 903 0 2590 271 75 64 chr10 138664474 138666184 -1650581 + L1MDa LINE L1 16 1724 -4816 291 343 63 58 chr10 138666364 138666729 -1650036 - L1ME LINE L1 -305 5865 5499 426 267 125 52 chr10 138666909 138667141 -1649624 - L1ME LINE L1 -905 5241 4993 249 230 95 27 chr10 138669594 138669668 -1647097 - LTR33A LTR ERVL -333 190 112 604 198 193 30 chr10 138669845 138670214 -1646551 - MLT1D LTR MaLR -15 490 24 306 294 46 9 chr10 138670245 138670354 -1646411 - MIR SINE MIR -118 144 32 282 129 40 59 chr10 138671322 138671423 -1645342 + GA-rich Low_complexity Low_complexity 4 102 0 937 264 60 46 chr10 138672836 138672927 -1643838 + MLT1B LTR MaLR 1 89 -301 2324 119 56 19 chr10 138672927 138673296 -1643469 + MSTB LTR MaLR 1 388 -38 2208 126 0 10 chr10 138673296 138673606 -1643159 - AluSx SINE Alu -5 307 1 2324 119 56 19 chr10 138673606 138673647 -1643118 + MSTB LTR MaLR 388 426 0 937 264 60 46 chr10 138673647 138673923 -1642842 + MLT1B LTR MaLR 89 373 -17 373 238 0 0 chr10 138674130 138674210 -1642555 - MLT1B LTR MaLR -40 350 271 487 258 25 0 chr10 138674395 138674515 -1642250 - MIR SINE MIR -137 125 3 857 308 91 46 chr10 138675012 138675811 -1640954 + L1MEd LINE L1 5 839 -5280 293 200 31 0 chr10 138675874 138675939 -1640826 - L1M3 LINE L1 -822 5512 5446 1904 165 86 20 chr10 138675940 138676449 -1640316 - MLT2A2 LTR ERVL 0 554 1 3123 198 23 27 chr10 138676449 138677232 -1639533 - L1M3 LINE L1 -743 5403 4669 222 329 0 0 chr10 138678075 138678145 -1638620 + MIR SINE MIR 128 197 -65 1396 250 99 2 chr10 138679820 138680276 -1636489 + LTR53 LTR ERVL 6 505 -14 207 255 0 0 chr10 138680619 138680670 -1636095 + (CCTG)n Simple_repeat Simple_repeat 1 51 0 23 33 0 0 chr10 138681164 138681194 -1635571 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 138681298 138681322 -1635443 + AT_rich Low_complexity Low_complexity 1 24 0 218 273 0 30 chr10 138682621 138682687 -1634078 - L2 LINE L2 -254 3018 2955 2279 117 0 3 chr10 138683248 138683548 -1633217 - AluSq SINE Alu -14 299 1 2160 139 26 59 chr10 138684657 138684955 -1631810 - MER65A LTR ERV1 0 445 139 1714 172 4 0 chr10 138684955 138685234 -1631531 + AluJo SINE Alu 1 280 -32 249 33 0 0 chr10 138685234 138685264 -1631501 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 2160 139 26 59 chr10 138685264 138685424 -1631341 - MER65A LTR ERV1 -304 141 1 2887 240 75 36 chr10 138686336 138687689 -1629076 - L1MC3 LINE L1 -1 7990 6665 183 382 15 0 chr10 138687709 138687777 -1628988 - L2 LINE L2 0 3272 3204 527 313 6 6 chr10 138689289 138689468 -1627297 + (CA)n Simple_repeat Simple_repeat 2 180 0 297 0 0 0 chr10 138689507 138689540 -1627225 + (CA)n Simple_repeat Simple_repeat 2 34 0 1111 211 75 128 chr10 138689655 138690149 -1626616 + MER70A LTR ERVL 5 472 0 253 163 0 0 chr10 138690384 138690433 -1626332 - MER4-int LTR ERV1 -5437 1161 1113 409 249 11 11 chr10 138690459 138690636 -1626129 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2606 251 43 46 chr10 138693199 138693728 -1623037 - L1MD2 LINE L1 -3 6356 5827 2136 128 0 0 chr10 138693728 138694046 -1622719 - AluSx SINE Alu 0 318 1 2606 251 43 46 chr10 138694046 138694905 -1621860 - L1MD2 LINE L1 -532 5827 4975 240 366 46 8 chr10 138695012 138695143 -1621622 + MLT1L LTR MaLR 308 443 -172 1669 181 94 3 chr10 138695312 138695704 -1621061 + MSTA LTR MaLR 1 428 0 3601 110 54 28 chr10 138695876 138696469 -1620296 + LTR10E LTR ERV1 1 609 0 205 224 21 56 chr10 138697279 138697422 -1619343 + (TAGGG)n Simple_repeat Simple_repeat 3 140 0 2890 16 0 0 chr10 138697548 138697859 -1618906 - AluYa5 SINE Alu 0 311 1 192 329 55 0 chr10 138698512 138698585 -1618180 + MIR3 SINE MIR 116 192 -16 283 376 0 16 chr10 138699275 138699400 -1617365 + L2 LINE L2 2937 3059 -213 324 263 68 76 chr10 138700739 138700942 -1615823 - MLT1E3 LTR MaLR -224 400 138 242 282 0 0 chr10 138701322 138701432 -1615333 + (TCTCTG)n Simple_repeat Simple_repeat 1 110 0 709 177 21 14 chr10 138703347 138703537 -1613228 + AluSc SINE Alu 140 330 0 1338 254 135 16 chr10 138704522 138704975 -1611790 + MLT1E LTR MaLR 74 580 -13 541 219 144 65 chr10 138707923 138708138 -1608627 - MER106B DNA MER1_type -4 1055 1 1583 199 33 40 chr10 138710229 138710626 -1606139 - MSTD LTR MaLR -1 395 2 2358 116 0 0 chr10 138712055 138712366 -1604399 + AluSx SINE Alu 1 311 -1 257 292 66 53 chr10 138713438 138713664 -1603101 + MLT1H LTR MaLR 127 355 -194 303 28 0 0 chr10 138713865 138713901 -1602864 + (CA)n Simple_repeat Simple_repeat 2 37 0 10859 141 33 30 chr10 138714222 138714757 -1602008 + Tigger1 DNA MER2_type 404 936 -1482 414 0 0 0 chr10 138714757 138714803 -1601962 + (CA)n Simple_repeat Simple_repeat 2 47 0 10859 141 33 30 chr10 138714803 138715315 -1601450 + Tigger1 DNA MER2_type 936 1445 -973 2291 123 3 0 chr10 138715315 138715625 -1601140 + AluSq SINE Alu 1 311 -2 10859 141 33 30 chr10 138715625 138715713 -1601052 + Tigger1 DNA MER2_type 1445 1531 -887 2297 109 3 10 chr10 138715713 138716024 -1600741 + AluY SINE Alu 1 309 -2 10859 141 33 30 chr10 138716024 138716894 -1599871 + Tigger1 DNA MER2_type 1531 2418 0 924 190 77 5 chr10 138718209 138718430 -1598335 + MLT1D LTR MaLR 1 237 -268 618 212 0 0 chr10 138718465 138718743 -1598022 + (CA)n Simple_repeat Simple_repeat 1 278 0 973 198 57 16 chr10 138718751 138719014 -1597751 + MLT1D LTR MaLR 188 471 -34 216 287 30 30 chr10 138719175 138719276 -1597489 + MIR3 SINE MIR 54 154 -54 1902 113 85 25 chr10 138720907 138721261 -1595504 - THE1C LTR MaLR 0 375 1 9204 115 49 43 chr10 138721261 138722831 -1593934 - THE1C-int LTR MaLR 0 1580 1 1962 126 52 25 chr10 138722831 138723196 -1593569 - THE1C LTR MaLR 0 375 1 1867 181 89 34 chr10 138726654 138727090 -1589675 + LTR2B LTR ERV1 31 490 0 26 0 0 0 chr10 138727464 138727490 -1589275 + AT_rich Low_complexity Low_complexity 1 26 0 1198 231 42 33 chr10 138731221 138731554 -1585211 + MER7A DNA MER2_type 1 334 -12 326 316 0 0 chr10 138731563 138731642 -1585123 + MER21B LTR ERV1 17 95 -768 273 232 87 0 chr10 138731694 138731763 -1585002 + MER21B LTR ERV1 98 172 -691 1309 269 112 26 chr10 138731777 138732323 -1584442 + MER21B LTR ERV1 126 718 -145 2398 94 3 3 chr10 138733991 138734299 -1582466 + AluSc SINE Alu 2 309 0 2494 92 0 0 chr10 138741008 138741314 -1575451 + AluSg1 SINE Alu 1 306 -3 267 103 0 0 chr10 138741322 138741361 -1575404 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1888 106 55 25 chr10 138741726 138742021 -1574744 - AluSx SINE Alu 0 303 1 21 0 0 0 chr10 138742057 138742078 -1574687 + AT_rich Low_complexity Low_complexity 1 21 0 200 230 216 0 chr10 138742195 138742269 -1574496 + MIR3 SINE MIR 105 194 -14 2421 92 0 3 chr10 138743039 138743343 -1573422 - AluSq SINE Alu -10 303 1 243 346 0 0 chr10 138745953 138746031 -1570734 + (CAGAGA)n Simple_repeat Simple_repeat 4 81 0 249 286 0 0 chr10 138746375 138746550 -1570215 + (CA)n Simple_repeat Simple_repeat 1 175 0 287 308 0 0 chr10 138746614 138746845 -1569920 + (CA)n Simple_repeat Simple_repeat 1 231 0 253 270 6 6 chr10 138746857 138747035 -1569730 + (CA)n Simple_repeat Simple_repeat 1 178 0 261 286 0 0 chr10 138747081 138747256 -1569509 + (CA)n Simple_repeat Simple_repeat 1 175 0 516 270 0 2 chr10 138747306 138747748 -1569017 + (CA)n Simple_repeat Simple_repeat 1 440 0 191 185 0 19 chr10 138747765 138747819 -1568946 + (CA)n Simple_repeat Simple_repeat 2 54 0 269 340 20 20 chr10 138751884 138752028 -1564737 + MIR SINE MIR 12 154 -74 419 323 0 19 chr10 138752548 138752703 -1564062 + (TG)n Simple_repeat Simple_repeat 2 153 0 23 33 0 0 chr10 138753820 138753850 -1562915 + AT_rich Low_complexity Low_complexity 1 30 0 696 142 0 9 chr10 138755525 138755638 -1561127 + AluJb SINE Alu 175 286 -26 3560 222 34 10 chr10 138755795 138756915 -1559850 + L1MB5 LINE L1 5009 6166 -8 343 211 39 77 chr10 138756917 138757021 -1559744 + HAL1 LINE L1 1175 1274 -1233 285 311 57 5 chr10 138759385 138759664 -1557101 - L1MC4a LINE L1 -299 5822 5728 3616 173 10 3 chr10 138759721 138760413 -1556352 - L1PB4 LINE L1 -1 6155 5459 7670 194 56 15 chr10 138760413 138762277 -1554488 + L1PB3 LINE L1 3086 5026 -1120 1330 51 0 0 chr10 138762277 138762433 -1554332 + AluY SINE Alu 156 311 0 4659 154 37 14 chr10 138762440 138763581 -1553184 + L1PB3 LINE L1 5016 6177 0 3066 218 23 4 chr10 138763581 138764419 -1552346 - L1PB4 LINE L1 -743 5403 4612 398 228 47 24 chr10 138764722 138764849 -1551916 - L2 LINE L2 -5 3267 3138 469 364 75 26 chr10 138765065 138765452 -1551313 - L1M4 LINE L1 -981 5165 4760 2192 70 0 27 chr10 138767725 138768025 -1548740 - AluY SINE Alu -19 292 1 1473 293 76 26 chr10 138768258 138768989 -1547776 - MER69B DNA AcHobo -44 1182 415 433 259 45 0 chr10 138768989 138769101 -1547664 - MSTD LTR MaLR 0 396 280 2713 243 98 49 chr10 138769122 138770080 -1546685 - MSTC-int LTR MaLR -436 1299 295 796 249 61 40 chr10 138770082 138770408 -1546357 + LTR56 LTR ERV1 1 333 -112 805 239 203 0 chr10 138770516 138770767 -1545998 - MSTC-int LTR MaLR -1433 302 1 300 216 121 4 chr10 138770767 138770888 -1545877 - MSTC LTR MaLR 0 432 216 1885 221 78 0 chr10 138770902 138771313 -1545452 + MLT1A1-int LTR MaLR 1293 1735 0 548 227 5 98 chr10 138771326 138771520 -1545245 + MLT1A1 LTR MaLR 19 194 -171 411 270 35 17 chr10 138771569 138771684 -1545081 - MSTC LTR MaLR -311 117 1 556 331 103 3 chr10 138771688 138772047 -1544718 - MER69B DNA AcHobo -831 395 1 31 0 0 0 chr10 138772132 138772163 -1544602 + AT_rich Low_complexity Low_complexity 1 31 0 341 313 27 20 chr10 138772538 138772685 -1544080 - L1ME LINE L1 -450 5671 5524 2119 106 3 0 chr10 138772838 138773141 -1543624 + AluSx SINE Alu 2 305 -7 385 136 0 0 chr10 138773806 138773865 -1542900 + Alu SINE Alu 235 293 -7 1017 221 20 130 chr10 138774459 138774867 -1541898 + MLT1A1 LTR MaLR 3 365 0 269 242 0 0 chr10 138777676 138777738 -1539027 + C-rich Low_complexity Low_complexity 4 65 0 1433 199 64 46 chr10 138779173 138779312 -1537453 + MER46B DNA MER2_type 2 27 -2704 2402 57 0 3 chr10 138779312 138779610 -1537155 + AluY SINE Alu 1 297 -14 1433 199 64 46 chr10 138779610 138779816 -1536949 + MER46B DNA MER2_type 27 228 -8 26 74 0 0 chr10 138780253 138780307 -1536458 + AT_rich Low_complexity Low_complexity 1 54 0 268 302 73 36 chr10 138780697 138780883 -1535882 - MIR SINE MIR -63 145 3 204 281 0 18 chr10 138781216 138781273 -1535492 + CT-rich Low_complexity Low_complexity 3 58 0 240 375 116 14 chr10 138784397 138784613 -1532152 + MIR SINE MIR 6 243 -19 231 114 0 0 chr10 138784958 138784993 -1531772 + (CA)n Simple_repeat Simple_repeat 2 36 0 314 343 83 29 chr10 138785800 138786004 -1530761 - MIR SINE MIR -2 260 46 2460 134 69 10 chr10 138788001 138788405 -1528360 + MSTA LTR MaLR 1 428 0 2394 68 0 10 chr10 138788635 138788942 -1527823 - AluY SINE Alu -7 304 1 1016 104 0 7 chr10 138789400 138789568 -1527197 - AluSq SINE Alu 0 313 150 309 252 0 0 chr10 138794515 138794650 -1522115 + (CA)n Simple_repeat Simple_repeat 1 135 0 225 217 0 0 chr10 138795367 138795413 -1521352 - L1P3 LINE L1 -5599 862 817 1701 161 3 10 chr10 138796868 138797159 -1519606 - AluJo SINE Alu -23 289 1 802 154 7 15 chr10 138797159 138797295 -1519470 - AluJb SINE Alu -177 135 1 537 158 0 0 chr10 138804410 138804511 -1512254 + (CA)n Simple_repeat Simple_repeat 2 102 0 24 0 0 0 chr10 138804597 138804621 -1512144 + AT_rich Low_complexity Low_complexity 1 24 0 2309 159 83 28 chr10 138804734 138805167 -1511598 + MSTB2 LTR MaLR 1 457 0 253 388 41 46 chr10 138805436 138805686 -1511079 + L3 LINE CR1 1151 1400 -177 2109 115 0 10 chr10 138805686 138805998 -1510767 - AluSc SINE Alu 0 309 1 253 388 41 46 chr10 138805998 138806162 -1510603 + L3 LINE CR1 1400 1563 -14 226 330 121 33 chr10 138806418 138806691 -1510074 + L1MC/D LINE L1 5614 5910 -1898 435 319 138 15 chr10 138807904 138808490 -1508275 + L2 LINE L2 2650 3312 -1 268 378 7 14 chr10 138811389 138811537 -1505228 + L2 LINE L2 3167 3313 0 250 311 40 23 chr10 138812245 138812422 -1504343 + HAL1 LINE L1 1093 1272 -1235 204 217 43 0 chr10 138812717 138812763 -1504002 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 * 432 342 88 24 chr10 138812755 138813211 -1503554 + HAL1 LINE L1 1320 1804 -703 615 203 0 22 chr10 138813565 138813658 -1503107 - MER46A DNA MER2_type -5 231 142 511 257 0 0 chr10 138813658 138813767 -1502998 + MER46A DNA MER2_type 4 112 -124 1758 147 62 27 chr10 138814292 138814584 -1502181 + AluSx SINE Alu 1 302 -10 247 146 24 0 chr10 138814784 138814825 -1501940 - MLT1H LTR MaLR -71 478 437 423 303 13 20 chr10 138814830 138814982 -1501783 + MLT1H LTR MaLR 391 541 -8 30 0 0 0 chr10 138816390 138816420 -1500345 + AT_rich Low_complexity Low_complexity 1 30 0 188 210 97 0 chr10 138817214 138817276 -1499489 - L2 LINE L2 -219 3053 2986 204 97 0 0 chr10 138817592 138817623 -1499142 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 421 181 5 29 chr10 138818891 138819291 -1497474 + (CA)n Simple_repeat Simple_repeat 1 390 0 281 291 102 15 chr10 138819570 138819776 -1496989 + LTR16C LTR ERVL 97 320 -171 2285 205 112 9 chr10 138822745 138823306 -1493459 - L1MB3 LINE L1 0 6183 5565 296 320 105 41 chr10 138824768 138825131 -1491634 - L2 LINE L2 -5 3308 2923 261 0 0 0 chr10 138825291 138825320 -1491445 + (TA)n Simple_repeat Simple_repeat 2 30 0 631 188 8 0 chr10 138825325 138825481 -1491284 - FLAM_A SINE Alu 0 157 1 220 295 66 16 chr10 138826035 138826157 -1490608 - L2 LINE L2 -1216 2098 1971 381 319 55 28 chr10 138826200 138826382 -1490383 + L1ME3 LINE L1 5771 5957 -205 2200 126 0 3 chr10 138827603 138827913 -1488852 + AluSg SINE Alu 1 309 -1 888 119 12 12 chr10 138827913 138828073 -1488692 + (GGAA)n Simple_repeat Simple_repeat 1 160 0 646 234 53 24 chr10 138828607 138828816 -1487949 - MER20 DNA MER1_type -3 216 2 217 200 0 0 chr10 138831377 138831412 -1485353 + (CGG)n Simple_repeat Simple_repeat 2 36 0 299 345 89 37 chr10 138832621 138833164 -1483601 - L2 LINE L2 -2 3311 2740 225 293 73 24 chr10 138833292 138833415 -1483350 - L2 LINE L2 -1029 2285 2157 2280 184 36 37 chr10 138833495 138834268 -1482497 - L1MC2 LINE L1 -8 6336 5432 1584 252 73 11 chr10 138835470 138836006 -1480759 + MER76 LTR ERV 1 569 -119 382 267 30 58 chr10 138836083 138836462 -1480303 + Charlie7 DNA MER1_type 1721 2134 -478 5428 133 13 0 chr10 138836551 138837396 -1479369 - Tigger1 DNA MER2_type -3 2415 1560 508 99 248 0 chr10 138837383 138837469 -1479296 - Tigger1 DNA MER2_type -996 1422 1312 3256 171 96 74 chr10 138837469 138838544 -1478221 - MER52A LTR ERV1 0 1278 53 606 200 0 14 chr10 138839028 138839168 -1477597 - MER52A LTR ERV1 -1406 349 212 478 214 20 0 chr10 138839153 138839251 -1477514 - MER52A LTR ERV1 -1653 102 3 * 7633 144 7 27 chr10 138839254 138840187 -1476578 - Tigger1 DNA MER2_type -1100 1318 416 2128 130 0 0 chr10 138840187 138840503 -1476262 - AluSx SINE Alu 0 316 1 7633 144 7 27 chr10 138840503 138840912 -1475853 - Tigger1 DNA MER2_type -2002 416 1 358 194 21 0 chr10 138846653 138846746 -1470019 + L1PB2 LINE L1 6057 6151 0 194 268 169 0 chr10 138848737 138848879 -1467886 - L2 LINE L2 -267 3046 2881 226 232 14 58 chr10 138849196 138849265 -1467500 + MIR SINE MIR 81 146 -62 2388 101 0 16 chr10 138849343 138849659 -1467106 - AluSx SINE Alu -1 311 1 239 170 0 38 chr10 138850268 138850321 -1466444 + GA-rich Low_complexity Low_complexity 2 52 0 805 166 21 20 chr10 138851001 138851305 -1465460 - MER4B LTR ERV1 -1 609 261 388 149 0 15 chr10 138851305 138851372 -1465393 - MER4A LTR ERV1 -566 98 33 * 596 148 0 155 chr10 138851370 138851525 -1465240 - MER4A LTR ERV1 -162 502 372 610 124 0 10 chr10 138851577 138851674 -1465091 - MER4A LTR ERV1 -566 98 3 291 154 33 110 chr10 138852720 138852811 -1463954 + MER69 DNA AcHobo 2441 2524 -2 2652 46 0 0 chr10 138852871 138853175 -1463590 + AluY SINE Alu 1 304 -7 231 250 13 26 chr10 138853629 138853705 -1463060 + L2 LINE L2 3226 3300 -13 338 293 19 38 chr10 138853723 138853829 -1462936 - L2 LINE L2 -17 3296 3193 441 332 76 24 chr10 138854373 138854861 -1461904 + L1MEd LINE L1 566 1082 -5037 1966 126 43 13 chr10 138854861 138855162 -1461603 + AluSx SINE Alu 1 310 -2 441 332 76 24 chr10 138855162 138855173 -1461592 + L1MEd LINE L1 1082 1091 -5028 637 308 66 52 chr10 138855175 138856103 -1460662 + L1M4 LINE L1 2734 3693 -2453 2060 147 16 0 chr10 138856103 138856584 -1460181 + AluSx SINE Alu 1 486 0 637 308 66 52 chr10 138856584 138857099 -1459666 + L1M4 LINE L1 3693 4199 -1947 1105 257 36 0 chr10 138857855 138858159 -1458606 + MER33 DNA MER1_type 9 323 -1 471 266 40 29 chr10 138858746 138858919 -1457846 - MIR SINE MIR -69 193 19 957 294 44 10 chr10 138859607 138859992 -1456773 + MLT1C LTR MaLR 58 455 -12 307 265 75 7 chr10 138860328 138860475 -1456290 - L1ME4a LINE L1 -5 6116 5960 258 247 6 59 chr10 138860669 138860839 -1455926 + (TG)n Simple_repeat Simple_repeat 1 161 0 407 250 54 116 chr10 138860898 138860989 -1455776 - L1ME4a LINE L1 -160 5961 5866 2376 90 3 0 chr10 138860989 138861289 -1455476 + AluSp SINE Alu 1 301 -12 407 250 54 116 chr10 138861289 138861473 -1455292 - L1ME4a LINE L1 -255 5866 5703 2737 48 0 0 chr10 138862047 138862358 -1454407 - AluY SINE Alu 0 311 1 398 273 202 46 chr10 138862499 138862781 -1453984 - L1ME4a LINE L1 -1715 4431 4106 2184 123 7 0 chr10 138863488 138863781 -1452984 - AluSx SINE Alu -17 295 1 2917 116 70 7 chr10 138863965 138864422 -1452343 + LTR19A LTR ERV1 1 486 0 749 201 123 44 chr10 138864775 138865197 -1451568 + LTR56 LTR ERV1 9 437 0 465 281 92 7 chr10 138865203 138865484 -1451281 - L1MC5 LINE L1 -162 7799 7495 7231 250 75 45 chr10 138865510 138866217 -1450548 - L1ME1 LINE L1 -50 6911 6227 1464 178 0 34 chr10 138866217 138866515 -1450250 - L1MA5A LINE L1 -1 6296 6009 7231 250 75 45 chr10 138866515 138869055 -1447710 - L1ME1 LINE L1 -734 6227 3517 2179 116 0 0 chr10 138869055 138869347 -1447418 - AluSx SINE Alu -20 292 1 7231 250 75 45 chr10 138869347 138870124 -1446641 - L1ME1 LINE L1 -3444 3517 2765 517 189 12 134 chr10 138870174 138870338 -1446427 - L1ME4a LINE L1 -2074 4072 3929 752 287 77 23 chr10 138870360 138870799 -1445966 - L1ME1 LINE L1 -4336 2786 2324 * 1808 285 87 33 chr10 138870797 138871872 -1444893 - L1ME1 LINE L1 -4891 1532 825 260 245 8 44 chr10 138872348 138872506 -1444259 + A-rich Low_complexity Low_complexity 5 240 0 1564 125 13 4 chr10 138873011 138873243 -1443522 + MER4E LTR ERV1 85 318 -461 7670 55 5 0 chr10 138873261 138874201 -1442564 - L1PA7 LINE L1 0 6154 5213 250 206 29 15 chr10 138875792 138875860 -1440905 + MLT1A1 LTR MaLR 25 93 -272 206 210 65 16 chr10 138876464 138876588 -1440177 + (TA)n Simple_repeat Simple_repeat 2 131 0 926 29 0 0 chr10 138877189 138877294 -1439471 + L1MA1 LINE L1 6192 6296 -6 24 32 0 0 chr10 138877294 138877325 -1439440 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 138879509 138879538 -1437227 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr10 138880469 138880498 -1436267 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr10 138880784 138880814 -1435951 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 138881384 138881414 -1435351 + AT_rich Low_complexity Low_complexity 1 30 0 261 319 3 30 chr10 138882532 138882771 -1433994 + CT-rich Low_complexity Low_complexity 1 232 0 295 258 20 40 chr10 138884342 138884493 -1432272 + CT-rich Low_complexity Low_complexity 2 149 0 301 315 54 39 chr10 138884620 138884880 -1431885 + L1ME2 LINE L1 988 1251 -4868 558 274 66 47 chr10 138885939 138886301 -1430464 + L1ME2 LINE L1 2298 2666 -3463 453 297 52 27 chr10 138886641 138887042 -1429723 + L1ME2 LINE L1 4247 4657 -1472 970 245 70 54 chr10 138887068 138887709 -1429056 + L1ME2 LINE L1 4882 5521 -632 1847 187 29 13 chr10 138887859 138888234 -1428531 - MLT1B LTR MaLR -9 381 1 1318 226 124 3 chr10 138888234 138888606 -1428159 + L1ME2 LINE L1 5720 6136 -11 2319 213 67 7 chr10 138888682 138889264 -1427501 - L1MD1 LINE L1 -1 6241 5625 1184 207 23 16 chr10 138889264 138889568 -1427197 - L1MDa LINE L1 -4015 2525 2220 1371 249 52 10 chr10 138889572 138890293 -1426472 - L1MD1 LINE L1 -636 5606 4852 1614 170 98 31 chr10 138890348 138890737 -1426028 + L1MB8 LINE L1 5730 6144 -34 273 150 0 0 chr10 138890748 138890788 -1425977 - L1M4 LINE L1 -3156 2990 2951 1047 255 107 21 chr10 138890811 138891231 -1425534 - L1MD1 LINE L1 -1286 4860 4405 558 101 126 0 chr10 138891231 138891377 -1425388 - AluY SINE Alu 0 308 148 986 197 89 6 chr10 138892066 138892351 -1424414 - MLT1B LTR MaLR -12 378 6 238 350 46 21 chr10 138892531 138892725 -1424040 + L1ME1 LINE L1 331 529 -5867 422 260 80 0 chr10 138892822 138892972 -1423793 + L1ME1 LINE L1 1890 2051 -4345 557 212 100 0 chr10 138892999 138893169 -1423596 + L1ME1 LINE L1 3875 4061 -2154 2337 102 0 3 chr10 138893268 138893572 -1423193 + AluSq SINE Alu 1 303 -10 302 278 10 0 chr10 138893611 138893708 -1423057 + L1ME1 LINE L1 4787 4884 -1331 605 243 0 7 chr10 138893769 138893913 -1422852 + L1M4 LINE L1 29 171 -6371 362 207 37 1 chr10 138893918 138894022 -1422743 + L1ME1 LINE L1 5323 5422 -813 257 250 0 0 chr10 138894019 138894075 -1422690 + L1ME1 LINE L1 6102 6157 -9 * 2125 271 33 13 chr10 138894097 138894788 -1421977 + L1ME1 LINE L1 5380 6084 -151 4523 176 39 13 chr10 138894798 138895777 -1420988 + L1MB3 LINE L1 5243 6246 -6 249 263 0 0 chr10 138896635 138896692 -1420073 + (TTCA)n Simple_repeat Simple_repeat 4 60 0 193 304 89 77 chr10 138896861 138897029 -1419736 - L2 LINE L2 -237 3035 2866 907 241 120 7 chr10 138897295 138897586 -1419179 - MLT1A2 LTR MaLR -49 325 2 348 254 205 54 chr10 138898896 138899081 -1417684 + MER20 DNA MER1_type 4 216 -3 248 348 42 0 chr10 138899317 138899435 -1417330 - MIR SINE MIR -34 228 106 407 336 161 5 chr10 138899444 138899667 -1417098 - MIR SINE MIR -2 260 3 4818 217 44 26 chr10 138899905 138901429 -1415336 + L1M4 LINE L1 1532 3085 -3559 1774 234 52 47 chr10 138901531 138902198 -1414567 + L1M4 LINE L1 3122 3792 -2852 240 111 0 0 chr10 138906437 138906473 -1410292 + (TG)n Simple_repeat Simple_repeat 2 37 0 216 0 0 0 chr10 138907780 138907804 -1408961 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 250 208 0 0 chr10 138907831 138907879 -1408886 + MLT1D LTR MaLR 81 128 -377 214 274 140 38 chr10 138908689 138908846 -1407919 + MER91A DNA MER1_type 22 194 -2 477 327 45 20 chr10 138910386 138910588 -1406177 - MIR SINE MIR -35 227 21 198 103 0 0 chr10 138911527 138911556 -1405209 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 438 278 75 6 chr10 138912512 138912685 -1404080 + L1M4 LINE L1 2320 2504 -3642 550 294 86 30 chr10 138913819 138914213 -1402552 + L1MEd LINE L1 436 851 -5268 211 295 7 27 chr10 139117348 139117497 -1199268 + (CCCCAG)n Simple_repeat Simple_repeat 6 151 0 2202 89 0 3 chr10 139118595 139118888 -1197877 + AluSc SINE Alu 1 292 -17 580 268 167 22 chr10 139118891 139119119 -1197646 + L1MD2 LINE L1 5448 5708 -651 279 331 69 0 chr10 139119444 139119589 -1197176 + L1MD2 LINE L1 6195 6349 -10 22 0 0 0 chr10 139120416 139120438 -1196327 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr10 139120439 139120469 -1196296 + (TA)n Simple_repeat Simple_repeat 1 30 0 24 0 0 0 chr10 139120787 139120811 -1195954 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr10 139121934 139121959 -1194806 + AT_rich Low_complexity Low_complexity 1 25 0 213 229 0 33 chr10 139122030 139122091 -1194674 + (CCCG)n Simple_repeat Simple_repeat 2 60 0 714 172 0 83 chr10 139124600 139124745 -1192020 + FLAM_C SINE Alu 1 133 0 34 0 0 0 chr10 139124745 139124779 -1191986 + AT_rich Low_complexity Low_complexity 1 34 0 325 172 21 11 chr10 139127827 139127920 -1188845 + C-rich Low_complexity Low_complexity 2 95 0 1723 151 11 4 chr10 139128795 139129073 -1187692 + AluJo SINE Alu 1 280 -32 944 321 73 18 chr10 139131010 139131664 -1185101 + Charlie1a DNA MER1_type 3 692 -763 382 173 226 8 chr10 139131844 139131977 -1184788 + Charlie1a DNA MER1_type 1243 1404 -51 255 329 6 23 chr10 139135711 139136029 -1180736 + (CA)n Simple_repeat Simple_repeat 1 312 0 269 304 6 0 chr10 139136280 139136448 -1180317 + (CA)n Simple_repeat Simple_repeat 2 170 0 261 413 0 0 chr10 139138540 139138678 -1178087 + (TG)n Simple_repeat Simple_repeat 1 138 0 * 460 276 46 11 chr10 139138638 139138864 -1177901 + (CATG)n Simple_repeat Simple_repeat 1 233 0 1449 179 7 11 chr10 139139487 139139760 -1177005 - AluJb SINE Alu -8 304 33 469 349 122 4 chr10 139140095 139140766 -1175999 - L1MEd LINE L1 -4737 1401 655 245 202 213 0 chr10 139141059 139141153 -1175612 + L2 LINE L2 3159 3272 0 397 246 16 16 chr10 139144882 139144890 -1171875 + (CA)n Simple_repeat Simple_repeat 1 8 -1469 3415 277 82 69 chr10 139144890 139146105 -1170660 - Tigger3b DNA MER2_type 0 1231 1 397 246 16 16 chr10 139146105 139146359 -1170406 + (CA)n Simple_repeat Simple_repeat 7 1477 0 198 253 0 0 chr10 139146843 139146926 -1169839 + (CA)n Simple_repeat Simple_repeat 1 83 0 313 350 0 0 chr10 139146945 139147082 -1169683 + (CA)n Simple_repeat Simple_repeat 1 137 0 * 337 365 0 11 chr10 139147017 139147198 -1169567 + (CACG)n Simple_repeat Simple_repeat 1 179 0 * 434 331 0 6 chr10 139147093 139147274 -1169491 + (CA)n Simple_repeat Simple_repeat 1 180 0 278 385 0 22 chr10 139147290 139147472 -1169293 + (CACG)n Simple_repeat Simple_repeat 1 178 0 * 461 363 0 0 chr10 139147438 139147671 -1169094 + (CA)n Simple_repeat Simple_repeat 1 233 0 454 194 65 18 chr10 139149898 139150068 -1166697 + (CACTC)n Simple_repeat Simple_repeat 1 178 0 211 300 67 0 chr10 139153924 139154074 -1162691 + (CGGGG)n Simple_repeat Simple_repeat 5 164 0 2166 102 0 0 chr10 139155475 139155769 -1160996 + AluSc SINE Alu 16 309 0 612 197 231 0 chr10 139155799 139156002 -1160763 + MLT1J LTR MaLR 114 363 -148 2827 178 79 81 chr10 139156672 139157825 -1158940 + pTR5 LTR ERV1 740 1999 -439 403 266 16 0 chr10 139157825 139157949 -1158816 + LTR30 LTR ERV1 517 642 -80 1490 77 5 5 chr10 139157952 139158172 -1158593 + pTR5 LTR ERV1 172 391 -2047 738 178 7 0 chr10 139158538 139158673 -1158092 + THE1C LTR MaLR 240 375 0 189 0 0 0 chr10 139161811 139161832 -1154933 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1806 126 0 0 chr10 139161974 139162237 -1154528 - AluSx SINE Alu -3 309 47 310 250 19 0 chr10 139171516 139171620 -1145145 + L1MB5 LINE L1 5890 5995 -179 22 73 0 15 chr10 139171726 139171742 -1145023 + AT_rich Low_complexity Low_complexity 1 16 -51 1575 206 0 10 chr10 139171742 139172034 -1144731 - AluJb SINE Alu -23 289 1 22 73 0 15 chr10 139172034 139172085 -1144680 + AT_rich Low_complexity Low_complexity 16 67 0 305 301 111 47 chr10 139176371 139176793 -1139972 - L1M2 LINE L1 -5627 1222 774 1755 141 6 38 chr10 139178422 139178742 -1138023 - AluJb SINE Alu -2 310 1 25 31 0 0 chr10 139181887 139181919 -1134846 + AT_rich Low_complexity Low_complexity 1 32 0 610 230 59 104 chr10 139186381 139186755 -1130010 + MLT1B LTR MaLR 1 357 -33 228 295 19 9 chr10 139194933 139195038 -1121727 - L1M4 LINE L1 -924 5222 5117 323 146 8 138 chr10 139202195 139202318 -1114447 + MLT1A2 LTR MaLR 121 227 -147 266 250 10 0 chr10 139206208 139206312 -1110453 + (CA)n Simple_repeat Simple_repeat 2 106 0 438 274 0 8 chr10 139206377 139206852 -1109913 + (CA)n Simple_repeat Simple_repeat 1 470 0 371 307 11 0 chr10 139206961 139207251 -1109514 + (CA)n Simple_repeat Simple_repeat 1 293 0 454 281 40 27 chr10 139208551 139208990 -1107775 + (CCCA)n Simple_repeat Simple_repeat 1 444 0 302 191 23 30 chr10 139209998 139210129 -1106636 + CT-rich Low_complexity Low_complexity 3 132 0 269 264 99 33 chr10 139210404 139210525 -1106240 + MLT1B LTR MaLR 435 563 -4 414 261 67 0 chr10 139211939 139212058 -1104707 + MER3 DNA MER1_type 48 127 -82 219 333 61 0 chr10 139212556 139212655 -1104110 + L2 LINE L2 1870 1974 -1340 244 204 97 39 chr10 139213019 139213122 -1103643 - HAL1 LINE L1 -1026 1481 1373 454 323 81 101 chr10 139213161 139213657 -1103108 - L1MEd LINE L1 -4916 1203 718 606 211 0 9 chr10 139213864 139213973 -1102792 - L1MC2 LINE L1 -1 6412 6305 182 143 163 0 chr10 139214906 139214955 -1101810 + MIR SINE MIR 13 69 -193 385 256 12 19 chr10 139215519 139215679 -1101086 + (TG)n Simple_repeat Simple_repeat 1 159 0 270 339 11 0 chr10 139215720 139215894 -1100871 + (TG)n Simple_repeat Simple_repeat 2 177 0 210 156 0 0 chr10 139215975 139216020 -1100745 + (TG)n Simple_repeat Simple_repeat 1 45 0 952 229 14 5 chr10 139223232 139223450 -1093315 - L1MC2 LINE L1 -369 6044 5825 6817 249 47 24 chr10 139223461 139223661 -1093104 - L1MC2 LINE L1 -1402 4813 4619 1337 204 111 24 chr10 139223661 139223995 -1092770 - MLT1A1 LTR MaLR 0 365 3 6817 249 47 24 chr10 139223995 139226140 -1090625 - L1MC2 LINE L1 -1596 4619 2415 352 216 59 11 chr10 139226149 139226339 -1090426 - L1M4 LINE L1 -2852 3294 3002 * 2825 229 77 29 chr10 139226336 139227764 -1089001 - L1MC2 LINE L1 -3945 2451 1011 271 295 155 0 chr10 139230289 139230418 -1086347 + L1ME1 LINE L1 6013 6161 -5 211 248 19 0 chr10 139230813 139230918 -1085847 + (CA)n Simple_repeat Simple_repeat 2 108 0 464 270 23 11 chr10 139230965 139231139 -1085626 + (CTCA)n Simple_repeat Simple_repeat 3 178 0 216 276 0 0 chr10 139231178 139231283 -1085482 + (CA)n Simple_repeat Simple_repeat 1 105 0 2172 110 3 3 chr10 139232634 139232943 -1083822 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr10 139234808 139234831 -1081934 + AT_rich Low_complexity Low_complexity 1 23 0 198 252 9 19 chr10 139235382 139235489 -1081276 + (CATA)n Simple_repeat Simple_repeat 1 106 0 321 328 22 0 chr10 139235611 139235745 -1081020 + L1ME3A LINE L1 5728 5864 -306 372 339 36 55 chr10 139235810 139235864 -1080901 - L1ME3 LINE L1 -336 5895 5842 2180 112 0 13 chr10 139235864 139236168 -1080597 + AluSx SINE Alu 1 300 -12 372 339 36 55 chr10 139236168 139236278 -1080487 - L1ME3 LINE L1 -389 5842 5734 288 268 89 16 chr10 139237325 139237448 -1079317 - L1ME3 LINE L1 -655 5580 5449 409 278 24 24 chr10 139237461 139237630 -1079135 - L1MB3 LINE L1 -10 6173 6005 1758 204 131 9 chr10 139237825 139238290 -1078475 - L1MB3 LINE L1 -162 6009 5488 1547 68 0 5 chr10 139238290 139238511 -1078254 - pTR5 LTR ERV1 -2047 391 172 385 274 16 0 chr10 139238514 139238638 -1078127 - LTR30 LTR ERV1 -80 642 517 3091 140 62 36 chr10 139238638 139239389 -1077376 - pTR5 LTR ERV1 -439 1999 7 1661 259 43 53 chr10 139239389 139240106 -1076659 - L1MB3 LINE L1 -680 5503 4788 383 272 40 40 chr10 139240109 139240234 -1076531 - L1ME3 LINE L1 -2418 5459 5335 214 366 59 0 chr10 139242669 139242770 -1073995 - L2 LINE L2 -956 2358 2252 212 340 101 52 chr10 139242910 139243295 -1073470 - L2 LINE L2 -1025 2289 1886 327 316 253 0 chr10 139244446 139244604 -1072161 - L1ME3 LINE L1 -4617 1779 1582 300 309 31 0 chr10 139244706 139244803 -1071962 - L1ME3 LINE L1 -4957 1439 1340 16522 67 4 0 chr10 139244818 139247052 -1069713 + HERVL LTR ERVL 3062 5303 -351 2219 127 51 25 chr10 139247186 139247541 -1069224 - THE1B LTR MaLR 0 364 1 261 115 49 0 chr10 139247541 139247602 -1069163 - THE1B-int LTR MaLR 0 1580 1517 974 69 6 0 chr10 139247602 139247761 -1069004 - HERVL LTR ERVL -146 5508 5349 634 293 96 19 chr10 139247979 139248187 -1068578 + MIR SINE MIR 3 226 -36 243 195 50 88 chr10 139248399 139248558 -1068207 + (CAGGG)n Simple_repeat Simple_repeat 5 157 0 228 67 0 0 chr10 139249012 139249042 -1067723 + (A)n Simple_repeat Simple_repeat 1 30 0 236 291 126 10 chr10 139249066 139249169 -1067596 - L2 LINE L2 -1564 1750 1636 206 275 75 0 chr10 139250703 139250719 -1066046 + MIR SINE MIR 68 81 -181 2202 85 7 0 chr10 139250719 139251014 -1065751 - AluY SINE Alu -14 297 1 206 275 75 0 chr10 139251014 139251077 -1065688 + MIR SINE MIR 81 153 -109 1837 160 0 0 chr10 139253906 139254188 -1062577 - AluSx SINE Alu -6 306 25 336 135 0 0 chr10 139254188 139254240 -1062525 - AluJ/FLAM SINE Alu -226 76 25 326 154 0 0 chr10 139254238 139254290 -1062475 - AluJ/FLAM SINE Alu -224 78 27 * 533 239 17 107 chr10 139254290 139254524 -1062241 - AluJo SINE Alu -99 213 1 1643 194 7 0 chr10 139256464 139256758 -1060007 + AluJb SINE Alu 1 296 -16 349 278 63 0 chr10 139257016 139257142 -1059623 - L1MA10 LINE L1 -23 6311 6178 851 244 171 26 chr10 139257374 139257837 -1058928 - L1ME1 LINE L1 -161 6241 5712 2219 241 75 11 chr10 139257840 139258583 -1058182 - L1ME1 LINE L1 -999 5383 4593 695 229 100 48 chr10 139259577 139259887 -1056878 - HAL1 LINE L1 -48 2459 2134 407 76 15 30 chr10 139264933 139264999 -1051766 - Alu SINE Alu -253 65 1 254 262 74 0 chr10 139266240 139266389 -1050376 - L1ME1 LINE L1 -3224 3158 2999 315 257 118 7 chr10 139266449 139266585 -1050180 + L1MEc LINE L1 452 602 -5794 475 341 41 5 chr10 139267077 139267297 -1049468 - L1ME1 LINE L1 -3675 2707 2480 519 311 128 27 chr10 139267489 139267785 -1048980 - L1ME1 LINE L1 -4982 1402 1077 263 243 27 0 chr10 139267890 139267964 -1048801 + GA-rich Low_complexity Low_complexity 3 78 0 1504 320 51 31 chr10 139270411 139271605 -1045160 + L1MEc LINE L1 674 1891 -4505 645 291 52 138 chr10 139271816 139272221 -1044544 - L1 LINE L1 -834 5312 4943 367 326 23 51 chr10 139272388 139272561 -1044204 - L1 LINE L1 -1389 4757 4590 2307 99 0 10 chr10 139272561 139272874 -1043891 + AluY SINE Alu 1 310 -1 367 326 23 51 chr10 139272874 139272915 -1043850 - L1 LINE L1 -1556 4590 4549 184 273 117 0 chr10 139274655 139274732 -1042033 - MIR SINE MIR -132 130 45 207 88 0 0 chr10 139276445 139276479 -1040286 + (TTTAA)n Simple_repeat Simple_repeat 3 36 0 894 166 7 0 chr10 139276479 139276624 -1040141 - FRAM SINE Alu -30 146 1 757 256 34 62 chr10 139278625 139278949 -1037816 + L1MC5 LINE L1 6925 7239 -722 786 319 94 45 chr10 139279331 139280205 -1036560 + L1ME LINE L1 79 995 -5075 244 116 0 0 chr10 139280305 139280348 -1036417 + MSTB-int LTR MaLR 1595 1637 -14 2456 165 19 14 chr10 139280362 139280786 -1035979 + MSTB LTR MaLR 1 426 0 563 224 63 121 chr10 139280901 139281299 -1035466 + LTR37A LTR ERV1 46 420 -6 270 258 32 32 chr10 139282763 139282918 -1033847 + (CACAC)n Simple_repeat Simple_repeat 4 158 0 210 284 46 0 chr10 139282940 139283049 -1033716 + (CACGT)n Simple_repeat Simple_repeat 5 118 0 615 295 61 25 chr10 139284366 139284708 -1032057 - MLT1A1 LTR MaLR -13 361 1 2090 126 0 3 chr10 139284928 139285229 -1031536 - AluSx SINE Alu -7 305 6 205 300 6 65 chr10 139287334 139287504 -1029261 + CT-rich Low_complexity Low_complexity 5 164 0 * 306 206 20 121 chr10 139287425 139287624 -1029141 + C-rich Low_complexity Low_complexity 1 179 0 368 235 24 18 chr10 139287740 139287906 -1028859 + (CACCT)n Simple_repeat Simple_repeat 3 169 0 278 265 24 18 chr10 139288054 139288220 -1028545 + (CACCT)n Simple_repeat Simple_repeat 3 169 0 30 0 0 0 chr10 139289458 139289488 -1027277 + AT_rich Low_complexity Low_complexity 1 30 0 2111 90 11 0 chr10 139289509 139289817 -1026948 + AluSx SINE Alu 1 311 0 760 210 38 0 chr10 139292549 139292706 -1024059 + L1MB2 LINE L1 6007 6169 -2 224 238 20 40 chr10 139294018 139294119 -1022646 + C-rich Low_complexity Low_complexity 2 100 0 228 236 5 98 chr10 139294265 139294389 -1022376 + C-rich Low_complexity Low_complexity 5 184 0 448 293 135 0 chr10 139294389 139294597 -1022168 + L2 LINE L2 2624 2859 -455 202 262 0 58 chr10 139295197 139295369 -1021396 + (CAGGA)n Simple_repeat Simple_repeat 4 165 0 365 218 0 58 chr10 139295397 139295585 -1021180 + (CGGGA)n Simple_repeat Simple_repeat 4 180 0 483 311 95 3 chr10 139295715 139296030 -1020735 + HAL1b LINE L1 759 1102 -246 263 297 0 0 chr10 139296072 139296146 -1020619 + HAL1b LINE L1 1214 1287 -61 404 385 21 27 chr10 139296387 139296574 -1020191 + L1 LINE L1 4878 5063 -1083 3536 286 57 39 chr10 139296655 139296906 -1019859 + L1ME2 LINE L1 4017 4262 -1902 1997 122 7 3 chr10 139296906 139297192 -1019573 + AluSx SINE Alu 1 287 -25 3536 286 57 39 chr10 139297192 139298098 -1018667 + L1ME2 LINE L1 4262 5151 -1013 2281 84 0 7 chr10 139298098 139298396 -1018369 + AluY SINE Alu 1 296 -15 3536 286 57 39 chr10 139298396 139299341 -1017424 + L1ME2 LINE L1 5151 6154 -10 501 333 48 14 chr10 139299374 139299581 -1017184 + L1MC4 LINE L1 7826 8039 -3 208 195 24 0 chr10 139299605 139299646 -1017119 + MIR3 SINE MIR 138 179 -29 2074 125 172 8 chr10 139299684 139300051 -1016714 - MSTA LTR MaLR -1 427 1 283 130 0 104 chr10 139300267 139300344 -1016421 + AluJo SINE Alu 83 151 -151 258 263 118 0 chr10 139301201 139301308 -1015457 - MIR SINE MIR -70 138 23 951 92 0 0 chr10 139305410 139305540 -1011225 + AluSg/x SINE Alu 163 292 -18 414 0 0 0 chr10 139305562 139305608 -1011157 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 414 0 0 0 chr10 139305724 139305770 -1010995 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 180 111 0 0 chr10 139305777 139305804 -1010961 + (A)n Simple_repeat Simple_repeat 1 27 0 202 370 48 12 chr10 139307797 139307962 -1008803 + MIR SINE MIR 14 184 -78 1181 158 119 63 chr10 139309461 139309746 -1007019 + AluSq SINE Alu 2 302 -1 1281 149 111 62 chr10 139309753 139310041 -1006724 + AluSq SINE Alu 1 302 -1 1797 142 3 16 chr10 139310054 139310364 -1006401 + AluJb SINE Alu 7 312 0 22 0 0 0 chr10 139310430 139310452 -1006313 + AT_rich Low_complexity Low_complexity 1 22 0 1553 109 5 0 chr10 139310572 139310793 -1005972 + AluSp SINE Alu 84 305 -8 3316 205 2 8 chr10 139310983 139311592 -1005173 - MST-int LTR MaLR -785 866 262 357 247 159 13 chr10 139311592 139311831 -1004934 + L1M4 LINE L1 3341 3614 -2532 2326 245 49 17 chr10 139311941 139312294 -1004471 + L1M4 LINE L1 3810 4150 -1996 3336 154 9 59 chr10 139312294 139312925 -1003840 - MER4A LTR ERV1 0 600 1 2326 245 49 17 chr10 139312925 139313281 -1003484 + L1M4 LINE L1 4150 4542 -1604 253 135 0 0 chr10 139313302 139313339 -1003426 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313360 139313397 -1003368 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313418 139313455 -1003310 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313476 139313513 -1003252 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313534 139313571 -1003194 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313592 139313629 -1003136 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313650 139313687 -1003078 + L1M4 LINE L1 4506 4542 -1604 257 263 0 0 chr10 139313708 139313765 -1003000 + L1M4 LINE L1 4506 4562 -1584 253 135 0 0 chr10 139313766 139313803 -1002962 + L1M4 LINE L1 4506 4542 -1604 253 135 0 0 chr10 139313824 139313861 -1002904 + L1M4 LINE L1 4506 4542 -1604 263 263 0 0 chr10 139313882 139313939 -1002826 + L1M4 LINE L1 4506 4562 -1584 322 295 95 34 chr10 139314375 139314633 -1002132 - L1ME LINE L1 -398 5766 5482 1004 232 104 9 chr10 139315068 139315395 -1001370 + MLT1A2 LTR MaLR 1 358 -16 304 312 123 47 chr10 139316633 139316909 -999856 + L1M4 LINE L1 5039 5335 -811 895 200 41 0 chr10 139316925 139317145 -999620 - Charlie5 DNA MER1_type 0 2624 2396 24 32 0 0 chr10 139318920 139318951 -997814 + GC_rich Low_complexity Low_complexity 1 31 0 1144 226 109 50 chr10 139320745 139321147 -995618 - MER63B DNA MER1_type -10 426 1 421 307 88 10 chr10 139321987 139322179 -994586 - L1MC5 LINE L1 -53 7908 7702 410 307 45 87 chr10 139322672 139323134 -993631 - L1M4 LINE L1 -3539 3105 2663 422 247 99 44 chr10 139323155 139323337 -993428 + MER3 DNA MER1_type 16 207 -2 233 288 47 24 chr10 139323340 139323510 -993255 - L1M4 LINE L1 -3981 2663 2490 2549 52 0 0 chr10 139323523 139323831 -992934 - AluY SINE Alu -3 308 1 1308 160 11 57 chr10 139323857 139324138 -992627 + AluJo SINE Alu 39 306 -6 711 177 57 44 chr10 139324277 139324300 -992465 + L1PB4 LINE L1 5754 5775 -381 225 0 0 0 chr10 139324300 139324325 -992440 + (TG)n Simple_repeat Simple_repeat 2 26 0 711 177 57 44 chr10 139324325 139324618 -992147 + L1PB4 LINE L1 5775 6155 -1 310 378 11 11 chr10 139324830 139325043 -991722 - HAL1b LINE L1 -740 608 393 2201 82 0 23 chr10 139325043 139325349 -991416 - AluSc SINE Alu 0 309 11 310 378 11 11 chr10 139325349 139325410 -991355 - HAL1b LINE L1 -954 394 334 2014 127 0 0 chr10 139326690 139327003 -989762 - AluSx SINE Alu 0 312 2 1062 260 34 96 chr10 139327194 139327921 -988844 - L1M4 LINE L1 -4405 2239 1443 492 259 0 0 chr10 139328327 139328551 -988214 + (CA)n Simple_repeat Simple_repeat 1 224 0 253 220 0 0 chr10 139328555 139328605 -988160 - MER4-int LTR ERV1 -5437 1161 1112 488 250 0 6 chr10 139328631 139328779 -987986 + (CA)n Simple_repeat Simple_repeat 1 149 -22 2213 82 3 13 chr10 139328779 139329084 -987681 + AluSg SINE Alu 1 302 -8 488 250 0 6 chr10 139329084 139329107 -987658 + (CA)n Simple_repeat Simple_repeat 149 171 0 223 201 60 0 chr10 139330792 139330926 -985839 + (CA)n Simple_repeat Simple_repeat 2 143 0 232 305 38 0 chr10 139330945 139331050 -985715 + (CA)n Simple_repeat Simple_repeat 1 109 0 429 256 195 6 chr10 139331128 139331292 -985473 + MER3 DNA MER1_type 15 209 0 338 380 60 35 chr10 139331309 139331625 -985140 + L1M4 LINE L1 3611 3934 -2212 1180 233 139 4 chr10 139331634 139332130 -984635 + L1MEc LINE L1 1320 2062 -4545 897 264 48 26 chr10 139332165 139332719 -984046 + MLT1E LTR MaLR 9 577 -16 25 0 0 0 chr10 139332769 139332794 -983971 + AT_rich Low_complexity Low_complexity 1 25 0 1922 103 33 0 chr10 139332801 139333103 -983662 + AluSx SINE Alu 1 311 0 391 342 52 54 chr10 139333810 139334234 -982531 + L1M4 LINE L1 4280 4702 -1444 249 263 34 43 chr10 139334272 139334450 -982315 + L1M4 LINE L1 5191 5372 -774 2163 96 0 26 chr10 139337473 139337785 -978980 - AluSq SINE Alu -9 304 1 259 246 0 31 chr10 139338383 139338448 -978317 + HAL1 LINE L1 2080 2142 -365 1207 141 128 70 chr10 139339915 139340228 -976537 - MER44D DNA MER2_type -8 601 1 806 162 174 12 chr10 139340527 139340694 -976071 + AluJb SINE Alu 27 220 -92 267 31 0 0 chr10 139442250 139442282 -874483 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 249 226 16 0 chr10 139443784 139443846 -872919 - LTR48 LTR ERV1 -40 747 685 1792 140 4 11 chr10 139444489 139444768 -871997 - AluSx SINE Alu -24 288 12 2182 111 3 3 chr10 139444974 139445281 -871484 - AluSc SINE Alu 0 309 1 243 280 13 0 chr10 139445635 139445710 -871055 - MLT1D LTR MaLR 0 505 430 255 333 65 38 chr10 139447299 139447485 -869280 + MIR3 SINE MIR 18 208 0 1937 159 0 0 chr10 139450315 139450611 -866154 - AluJb SINE Alu -16 296 1 23 0 0 0 chr10 139452757 139452780 -863985 + GC_rich Low_complexity Low_complexity 1 23 0 298 162 50 71 chr10 139454684 139454783 -861982 + (TCCG)n Simple_repeat Simple_repeat 2 98 0 698 223 4 0 chr10 139460771 139461036 -855729 + (ATG)n Simple_repeat Simple_repeat 1 266 0 655 209 6 6 chr10 139461071 139461248 -855517 + (ATGGTG)n Simple_repeat Simple_repeat 4 180 0 221 333 86 0 chr10 139461325 139461430 -855335 - MIR SINE MIR -142 120 7 191 284 58 0 chr10 139461582 139461651 -855114 + MIR SINE MIR 8 79 -130 378 252 72 14 chr10 139462502 139462641 -854124 + L2 LINE L2 2932 3078 -194 345 380 98 12 chr10 139463357 139463602 -853163 - L1MC/D LINE L1 -2018 5790 5525 261 0 0 0 chr10 139464078 139464107 -852658 + (CCCCG)n Simple_repeat Simple_repeat 1 29 0 1111 258 134 38 chr10 139466575 139467120 -849645 + L1MD3 LINE L1 7103 7897 -90 2293 86 0 13 chr10 139467120 139467433 -849332 + AluSc SINE Alu 1 309 0 1111 258 134 38 chr10 139467433 139467532 -849233 + L1MD3 LINE L1 7897 7985 -2 247 130 9 130 chr10 139470169 139470320 -846445 + (CCCCCA)n Simple_repeat Simple_repeat 1 132 0 492 367 61 32 chr10 139475877 139476256 -840509 + L1MC5 LINE L1 7542 7931 -30 693 159 153 23 chr10 139476741 139476917 -839848 - MER54B LTR ERVL -48 745 547 194 356 55 55 chr10 139477383 139477529 -839236 + MIR SINE MIR 61 206 -56 1274 226 114 8 chr10 139478411 139478893 -837872 - MER74A LTR ERVL 0 558 26 322 176 24 0 chr10 139478917 139479002 -837763 + (CA)n Simple_repeat Simple_repeat 1 87 0 2166 104 0 3 chr10 139482692 139482999 -833766 - AluY SINE Alu -5 306 1 237 48 0 159 chr10 139483416 139483624 -833141 + (TCCC)n Simple_repeat Simple_repeat 3 177 0 21 0 0 0 chr10 139488887 139488908 -827857 + GC_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr10 139489222 139489252 -827513 + (TC)n Simple_repeat Simple_repeat 2 31 0 341 180 43 65 chr10 139489683 139489822 -826943 + G-rich Low_complexity Low_complexity 6 141 0 243 0 0 0 chr10 139489899 139489926 -826839 + (CCCG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 139490022 139490050 -826715 + GC_rich Low_complexity Low_complexity 1 28 0 369 116 0 0 chr10 139490226 139490295 -826470 + (CCCGG)n Simple_repeat Simple_repeat 4 72 0 1027 294 87 0 chr10 139491514 139491824 -824941 - MER58B DNA MER1_type 0 341 5 279 313 116 27 chr10 139492498 139492757 -824008 + L2 LINE L2 2467 2748 -566 342 287 85 0 chr10 139495902 139496031 -820734 + MER5C DNA MER1_type 185 324 0 744 191 0 0 chr10 139496498 139496776 -819989 + (CA)n Simple_repeat Simple_repeat 1 278 0 870 165 0 0 chr10 139496807 139496977 -819788 + (CA)n Simple_repeat Simple_repeat 2 171 0 295 219 37 24 chr10 139500649 139500731 -816034 + MER58A DNA MER1_type 1 83 -24 248 379 23 0 chr10 139504337 139504469 -812296 + L2 LINE L2 2590 2724 -590 255 297 81 27 chr10 139505052 139505200 -811565 + MER5A DNA MER1_type 1 156 -33 194 224 0 61 chr10 139506077 139506126 -810639 - MER5B DNA MER1_type -2 176 131 715 374 63 37 chr10 139506441 139507112 -809653 + L1MEc LINE L1 258 945 -5451 930 310 66 25 chr10 139507115 139507991 -808774 + L1MCa LINE L1 875 1967 -4513 259 266 63 49 chr10 139508009 139508152 -808613 + L1MCa LINE L1 2060 2204 -4403 233 153 0 122 chr10 139509605 139509703 -807062 + G-rich Low_complexity Low_complexity 5 90 0 211 333 0 21 chr10 139510486 139510579 -806186 + GA-rich Low_complexity Low_complexity 2 92 0 1819 176 0 7 chr10 139511174 139511470 -805295 - AluJb SINE Alu -18 294 1 292 328 25 8 chr10 139512467 139512586 -804179 - MIR SINE MIR -72 136 16 198 118 0 0 chr10 139512592 139512626 -804139 + (CAGCT)n Simple_repeat Simple_repeat 1 34 0 1086 165 8 8 chr10 139516137 139516512 -800253 + (CA)n Simple_repeat Simple_repeat 1 375 0 803 282 98 9 chr10 139516803 139517129 -799636 + MER68 LTR ERV1 24 378 -184 202 230 11 46 chr10 139517241 139517328 -799437 + (ACGTG)n Simple_repeat Simple_repeat 4 87 0 329 219 49 0 chr10 139517331 139517413 -799352 + MER68 LTR ERV1 477 562 0 212 276 0 77 chr10 139519004 139519185 -797580 + (CA)n Simple_repeat Simple_repeat 1 167 0 339 276 200 18 chr10 139520107 139520277 -796488 + L1ME LINE L1 5571 5771 -391 254 54 0 0 chr10 139520420 139520457 -796308 + tRNA-His-CAC tRNA tRNA 1 37 -38 1603 243 36 18 chr10 139521705 139522577 -794188 + L1MC4a LINE L1 4927 5819 -347 248 318 48 16 chr10 139522673 139522799 -793966 + L1MC4a LINE L1 5853 5982 -1803 455 185 7 48 chr10 139522915 139523357 -793408 + (CACAC)n Simple_repeat Simple_repeat 1 423 0 616 335 106 11 chr10 139523357 139523758 -793007 + L1MC4a LINE L1 6152 6568 -1240 253 255 0 0 chr10 139524615 139524666 -792099 + L2 LINE L2 3209 3259 -13 316 342 147 5 chr10 139525951 139526141 -790624 + MIR SINE MIR 14 230 -32 362 279 27 0 chr10 139542367 139542478 -774287 - MER7A DNA MER2_type -232 114 3 1907 106 34 0 chr10 139542620 139542885 -773880 - AluSx SINE Alu -38 274 1 459 307 73 56 chr10 139543129 139543432 -773333 - L1MEc LINE L1 -5772 624 317 1534 304 78 0 chr10 139544455 139545033 -771732 + L1MB7 LINE L1 4654 5276 -870 4579 224 128 18 chr10 139545090 139547362 -769403 + L1MCb LINE L1 7 2562 -4002 1466 170 70 0 chr10 139547362 139547621 -769144 - AluJo SINE Alu -18 294 18 538 171 9 63 chr10 139547628 139547664 -769101 - AluJo SINE Alu -167 145 109 2691 94 14 3 chr10 139547664 139548024 -768741 + THE1B LTR MaLR 1 364 0 11937 83 21 8 chr10 139548024 139548520 -768245 + THE1B-int LTR MaLR 1 489 -1091 2252 98 9 19 chr10 139548520 139548835 -767930 + AluSx SINE Alu 1 312 0 11937 83 21 8 chr10 139548835 139549898 -766867 + THE1B-int LTR MaLR 489 1580 0 2527 112 14 19 chr10 139549898 139550264 -766501 + THE1B LTR MaLR 1 364 0 538 171 9 63 chr10 139550264 139550336 -766429 - AluJo SINE Alu -200 112 41 1556 195 26 16 chr10 139550376 139550679 -766086 + AluJb SINE Alu 1 306 -6 2952 214 58 32 chr10 139550711 139551579 -765186 + L1MB7 LINE L1 5295 6184 0 1076 256 83 18 chr10 139552371 139552757 -764008 + MLT1C LTR MaLR 1 411 -56 320 297 51 46 chr10 139552844 139553039 -763726 - MLT1A1 LTR MaLR -169 196 1 313 206 0 15 chr10 139553160 139553228 -763537 + MLT1C LTR MaLR 485 551 -73 689 149 60 0 chr10 139553236 139553370 -763395 - LTR8 LTR ERV1 -2 689 548 288 328 82 0 chr10 139559606 139559728 -757037 + MIR SINE MIR 116 247 -15 234 220 0 0 chr10 139559737 139559796 -756969 + (ATGGTG)n Simple_repeat Simple_repeat 2 60 0 605 216 0 17 chr10 139559809 139559985 -756780 + (ATGGTG)n Simple_repeat Simple_repeat 6 178 0 293 263 75 0 chr10 139560628 139560708 -756057 - MLT1D LTR MaLR -417 88 3 953 155 7 0 chr10 139561693 139561841 -754924 + AluJb SINE Alu 142 290 -22 258 224 71 51 chr10 139561862 139561960 -754805 - MLT1D LTR MaLR -398 107 8 612 254 62 86 chr10 139563923 139564341 -752424 + MLT1C LTR MaLR 42 449 -18 1439 142 5 0 chr10 139565583 139565801 -750964 + AluJo SINE Alu 83 301 -11 469 268 31 31 chr10 139565842 139566036 -750729 + L1M4 LINE L1 4011 4204 -1942 503 221 25 25 chr10 139566044 139566166 -750599 + FLAM_C SINE Alu 6 127 -16 742 245 56 25 chr10 139566171 139566493 -750272 + L1M4 LINE L1 4194 4525 -1621 848 328 69 19 chr10 139566511 139567091 -749674 + L1M4 LINE L1 4614 5222 -924 198 314 35 23 chr10 139568053 139568139 -748626 - MER5B DNA MER1_type -52 126 40 191 262 0 0 chr10 139569083 139569125 -747640 + MIR SINE MIR 109 150 -58 306 145 224 26 chr10 139570005 139570081 -746684 - L2 LINE L2 -4 3309 3219 550 135 53 15 chr10 139572205 139572338 -744427 + LTR37A LTR ERV1 289 426 0 276 310 47 23 chr10 139572353 139572524 -744241 + L1 LINE L1 4599 4773 -1373 337 309 99 58 chr10 139572639 139572862 -743903 + L1 LINE L1 5001 5232 -914 298 267 30 38 chr10 139572964 139573095 -743670 + HAL1 LINE L1 2322 2451 -56 334 250 32 24 chr10 139574433 139574557 -742208 + C-rich Low_complexity Low_complexity 3 127 0 837 259 41 35 chr10 139577175 139577542 -739223 + L1M4 LINE L1 4318 4686 -1460 1612 153 24 34 chr10 139577591 139577886 -738879 + AluJb SINE Alu 7 298 -14 341 307 16 8 chr10 139578319 139578446 -738319 + L1M4 LINE L1 4966 5093 -1053 332 384 58 11 chr10 139578487 139578677 -738088 - L1ME4a LINE L1 -235 5886 5688 35 24 0 0 chr10 139580300 139580342 -736423 + AT_rich Low_complexity Low_complexity 1 42 0 917 142 97 0 chr10 139582791 139582946 -733819 - AluJ SINE Alu -18 294 125 329 349 15 0 chr10 139582946 139583077 -733688 - L1MC4 LINE L1 -1339 6703 6614 301 230 18 106 chr10 139583073 139583186 -733579 - L1MCa LINE L1 -4346 2194 2092 * 205 185 31 0 chr10 139583186 139583251 -733514 + (TA)n Simple_repeat Simple_repeat 2 68 0 906 146 0 0 chr10 139583252 139583382 -733383 - AluJ SINE Alu -171 131 2 1601 179 0 45 chr10 139584909 139585217 -731548 + AluJo SINE Alu 1 294 -18 251 108 0 0 chr10 139585658 139585695 -731070 - MER58 DNA MER1_type -27 2393 2357 470 211 0 98 chr10 139585697 139585735 -731030 - MER58 DNA MER1_type -113 228 188 1688 168 0 31 chr10 139585735 139586027 -730738 - AluJo SINE Alu -5 307 25 470 211 0 98 chr10 139586027 139586121 -730644 - MER58 DNA MER1_type -153 188 109 1349 238 40 8 chr10 139587874 139588252 -728513 + L1MB3 LINE L1 5646 6035 -148 634 213 8 0 chr10 139588293 139588415 -728350 - Charlie3 DNA MER1_type -2583 127 5 661 128 0 0 chr10 139590763 139590865 -725900 - FRAM SINE Alu -40 136 35 1778 173 40 0 chr10 139593780 139594080 -722685 + AluJb SINE Alu 1 312 0 433 217 8 8 chr10 139594096 139594216 -722549 + G-rich Low_complexity Low_complexity 5 124 0 180 0 0 0 chr10 139594226 139594246 -722519 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 1190 273 116 0 chr10 139594349 139594745 -722020 - L1MD1 LINE L1 -10 6232 5791 440 279 147 23 chr10 139594867 139595125 -721640 - L1MD1 LINE L1 -612 5630 5341 * 1314 221 28 6 chr10 139595120 139595442 -721323 - L1MCa LINE L1 -6195 345 17 208 339 62 9 chr10 139595989 139596101 -720664 - MIR3 SINE MIR -29 179 62 368 280 208 6 chr10 139596176 139596344 -720421 + L1MEc LINE L1 568 769 -5627 6428 195 185 6 chr10 139596370 139597941 -718824 + L1PB1 LINE L1 12 1886 -4977 1682 100 35 13 chr10 139597941 139598172 -718593 + AluSg/x SINE Alu 68 303 -9 6428 195 185 6 chr10 139598172 139598224 -718541 + L1PB1 LINE L1 1886 1927 -4936 22366 69 16 2 chr10 139598229 139601253 -715512 + L1PA5 LINE L1 13 3079 -3067 18352 46 1 0 chr10 139601253 139604393 -712372 + L1PA5 LINE L1 3006 6151 -3 14942 188 13 16 chr10 139604413 139606305 -710460 + L1PB1 LINE L1 1950 3846 -3021 2493 92 0 0 chr10 139606305 139606611 -710154 + AluSg SINE Alu 1 306 -4 14942 188 13 16 chr10 139606611 139609196 -707569 + L1PB1 LINE L1 3846 6490 -377 2448 70 3 3 chr10 139609196 139609494 -707271 + AluSc SINE Alu 1 298 -11 14942 188 13 16 chr10 139609494 139609870 -706895 + L1PB1 LINE L1 6490 6866 -1 322 200 29 105 chr10 139609875 139609980 -706785 + L1MEc LINE L1 726 822 -5574 22 0 0 0 chr10 139610002 139610024 -706741 + AT_rich Low_complexity Low_complexity 1 22 0 489 274 19 19 chr10 139610024 139610239 -706526 + L1MEc LINE L1 810 1024 -5372 522 333 67 5 chr10 139610438 139610810 -705955 + L1M4 LINE L1 4665 5059 -1087 2144 200 20 24 chr10 139610841 139611284 -705481 + L1MB2 LINE L1 4837 5274 -909 2278 129 7 0 chr10 139611284 139611594 -705171 + AluSx SINE Alu 1 312 0 2144 200 20 24 chr10 139611594 139611918 -704847 + L1MB2 LINE L1 5274 5598 -585 904 160 21 0 chr10 139611922 139612066 -704699 - FRAM SINE Alu -25 151 5 987 208 0 28 chr10 139612074 139612286 -704479 + L1MB2 LINE L1 5646 5851 -320 1215 153 65 0 chr10 139612289 139612518 -704247 + L1MB2 LINE L1 5925 6168 -3 21 0 0 0 chr10 139613469 139613490 -703275 + GC_rich Low_complexity Low_complexity 1 21 0 337 362 79 38 chr10 139613604 139613971 -702794 + L1MB8 LINE L1 4987 5368 -778 1385 117 5 0 chr10 139613972 139613992 -702773 + AluSq SINE Alu 112 130 -183 2294 112 0 0 chr10 139613992 139614286 -702479 + AluSx SINE Alu 1 294 -18 1385 117 5 0 chr10 139614286 139614453 -702312 + AluSq SINE Alu 130 300 -13 547 234 71 7 chr10 139614453 139614607 -702158 + L1MCc LINE L1 21 184 -6239 2344 224 18 5 chr10 139615556 139616114 -700651 + L1MB8 LINE L1 5614 6178 0 519 321 58 7 chr10 139616114 139616388 -700377 + L1MCc LINE L1 2353 2640 -4482 1897 130 7 11 chr10 139616426 139616696 -700069 + AluSx SINE Alu 33 301 -11 4838 153 34 14 chr10 139616841 139617752 -699013 + L1PB4 LINE L1 4555 5446 -710 2259 128 0 10 chr10 139617752 139618065 -698700 + AluSx SINE Alu 1 310 -2 4838 153 34 14 chr10 139618065 139618306 -698459 + L1PB4 LINE L1 5446 5681 -475 1987 168 0 3 chr10 139618306 139618615 -698150 + AluJb SINE Alu 1 308 -4 2398 101 0 0 chr10 139618619 139618927 -697838 + AluY SINE Alu 1 308 -3 4838 153 34 14 chr10 139618927 139619341 -697424 + L1PB4 LINE L1 5683 6154 -2 545 221 103 62 chr10 139619317 139619549 -697216 + L1MCc LINE L1 2782 3030 -4092 * 1898 144 38 3 chr10 139619549 139619841 -696924 - AluJo SINE Alu -10 302 1 545 221 103 62 chr10 139619841 139619898 -696867 + L1MCc LINE L1 3030 3083 -4039 1641 131 165 8 chr10 139619898 139620331 -696434 + AluSg1 SINE Alu 1 475 0 281 206 0 0 chr10 139620332 139620395 -696370 + L1MCc LINE L1 3069 3131 -3991 1658 242 46 74 chr10 139620397 139620911 -695854 + L1MCc LINE L1 3175 3661 -3280 288 0 0 0 chr10 139620911 139620943 -695822 + (CA)n Simple_repeat Simple_repeat 2 33 0 1658 242 46 74 chr10 139620943 139621208 -695557 + L1MCc LINE L1 3661 3932 -3009 2430 102 0 0 chr10 139621656 139621969 -694796 + AluSq SINE Alu 1 313 0 190 407 9 0 chr10 139627485 139627593 -689172 - MIR SINE MIR -106 156 48 224 179 107 0 chr10 139627837 139627893 -688872 - MIR SINE MIR -14 248 187 289 272 45 118 chr10 139627893 139628357 -688408 + L1ME4a LINE L1 5690 6119 -2 278 216 40 0 chr10 139628580 139628654 -688111 - L1ME4a LINE L1 -3 6118 6042 313 301 56 43 chr10 139629424 139629703 -687062 - L1MD2 LINE L1 -238 5924 5689 467 314 31 4 chr10 139630561 139630787 -685978 - L1MD2 LINE L1 -1499 4647 4416 339 283 114 78 chr10 139630997 139631049 -685716 - L1MD2 LINE L1 -1833 4313 4264 2209 129 0 16 chr10 139631049 139631366 -685399 - AluSx SINE Alu 0 312 1 339 283 114 78 chr10 139631366 139631734 -685031 - L1MD2 LINE L1 -1882 4264 3878 282 224 82 24 chr10 139633272 139633357 -683408 + Tigger5 DNA MER2_type 2234 2323 0 250 240 40 0 chr10 139635612 139635687 -681078 + HERVL LTR ERVL 514 591 -5063 2355 66 0 20 chr10 139638043 139638348 -678417 - AluY SINE Alu -9 302 4 545 306 87 58 chr10 139638901 139639182 -677583 + L1MEd LINE L1 521 792 -5327 486 158 42 11 chr10 139639182 139639277 -677488 - L1MC1 LINE L1 0 6333 6236 545 306 87 58 chr10 139639277 139639687 -677078 + L1MEd LINE L1 792 1232 -4887 1692 149 34 20 chr10 139639860 139640156 -676609 - AluJb SINE Alu -12 300 1 1602 186 0 22 chr10 139640196 139640514 -676251 + AluJb SINE Alu 1 311 -1 587 213 25 45 chr10 139640517 139640719 -676046 + L1ME2 LINE L1 5297 5494 -668 266 310 0 0 chr10 139641217 139641288 -675477 + L1MC4a LINE L1 5449 5519 -2523 203 243 0 0 chr10 139642028 139642065 -674700 + polypurine Low_complexity Low_complexity 2 38 0 832 149 0 30 chr10 139642320 139642454 -674311 + FLAM_C SINE Alu 1 130 -3 261 325 35 0 chr10 139642898 139643012 -673753 + HAL1b LINE L1 260 377 -971 1943 71 100 14 chr10 139643164 139643445 -673320 + AluY SINE Alu 1 305 -6 862 286 123 67 chr10 139643451 139644182 -672583 + L1MC4a LINE L1 6787 7558 -250 21 0 0 0 chr10 139644213 139644234 -672531 + GC_rich Low_complexity Low_complexity 1 21 0 666 227 23 113 chr10 139644475 139644609 -672156 + L1MD3 LINE L1 7756 7858 -137 2353 149 36 29 chr10 139644609 139644930 -671835 + LTR56 LTR ERV1 1 327 -118 1322 171 71 36 chr10 139644930 139645210 -671555 + AluJo SINE Alu 1 290 -22 2353 149 36 29 chr10 139645210 139645330 -671435 + LTR56 LTR ERV1 327 445 0 666 227 23 113 chr10 139645330 139645451 -671314 + L1MD3 LINE L1 7858 7988 -7 600 270 159 28 chr10 139645479 139645629 -671136 + L1ME2 LINE L1 5757 5886 -278 2275 76 0 7 chr10 139645629 139645931 -670834 - AluY SINE Alu -11 300 1 600 270 159 28 chr10 139645931 139646132 -670633 + L1ME2 LINE L1 5886 6154 -10 1791 166 0 17 chr10 139646155 139646457 -670308 - AluJb SINE Alu -15 297 1 227 316 94 0 chr10 139646647 139646764 -670001 - L2 LINE L2 -20 3252 3125 1193 233 169 16 chr10 139646783 139647437 -669328 + L1MB2 LINE L1 5355 6169 -2 299 239 111 26 chr10 139647759 139647876 -668889 + L2 LINE L2 3136 3262 -10 882 181 36 0 chr10 139648735 139648901 -667864 + AluJb SINE Alu 137 308 -4 1383 191 0 15 chr10 139648998 139649260 -667505 - AluJo SINE Alu -18 294 37 1663 138 30 0 chr10 139649599 139649867 -666898 + AluJb SINE Alu 4 279 -33 339 25 0 0 chr10 139649879 139649919 -666846 + (GGAA)n Simple_repeat Simple_repeat 4 43 0 2047 138 3 0 chr10 139649938 139650250 -666515 + AluSq SINE Alu 1 313 0 1019 144 12 24 chr10 139650879 139651046 -665719 + AluSg/x SINE Alu 132 296 -16 1082 232 66 69 chr10 139651046 139651439 -665326 + L1MB1 LINE L1 5777 6168 0 300 255 85 32 chr10 139651532 139651626 -665139 + L1ME4a LINE L1 5828 5926 -195 1141 217 122 12 chr10 139651716 139652053 -664712 - MLT1A2 LTR MaLR 0 374 1 817 181 0 0 chr10 139652818 139652945 -663820 + FLAM_C SINE Alu 1 127 -6 2028 108 24 3 chr10 139653293 139653589 -663176 - AluSx SINE Alu -10 302 1 21 57 0 0 chr10 139655325 139655360 -661405 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 139655426 139655447 -661318 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr10 139655476 139655525 -661240 + GC_rich Low_complexity Low_complexity 1 49 0 24 77 0 0 chr10 139655631 139655683 -661082 + GC_rich Low_complexity Low_complexity 1 52 0 250 244 12 24 chr10 139656320 139656402 -660363 + G-rich Low_complexity Low_complexity 3 83 0 234 0 0 0 chr10 139656647 139656673 -660092 + (CCCCCA)n Simple_repeat Simple_repeat 5 30 0 624 270 79 28 chr10 139656827 139657112 -659653 - ERVL LTR ERVL -1846 3848 3512 1330 193 87 40 chr10 139657174 139657495 -659270 - MLT1B LTR MaLR -54 336 1 938 281 79 57 chr10 139657495 139657778 -658987 - ERVL LTR ERVL -2248 3516 3241 699 189 0 16 chr10 139657778 139657905 -658860 - FLAM_C SINE Alu -8 125 1 938 281 79 57 chr10 139657905 139658092 -658673 - ERVL LTR ERVL -2523 3241 3032 2178 137 44 14 chr10 139658092 139658456 -658309 - THE1C LTR MaLR 0 375 1 938 281 79 57 chr10 139658456 139658476 -658289 - ERVL LTR ERVL -2732 3032 3014 2342 337 60 42 chr10 139658515 139659393 -657372 - ERVL LTR ERVL -2808 2956 2095 1943 103 26 0 chr10 139659393 139659688 -657077 + AluSx SINE Alu 4 305 0 2342 337 60 42 chr10 139659688 139660052 -656713 - ERVL LTR ERVL -3669 2095 1739 2226 98 0 3 chr10 139660052 139660357 -656408 + AluSx SINE Alu 1 304 -8 2342 337 60 42 chr10 139660357 139660739 -656026 - ERVL LTR ERVL -4025 1739 1302 841 192 0 41 chr10 139660741 139660913 -655852 + FRAM SINE Alu 1 162 -14 2198 107 0 0 chr10 139660916 139661215 -655550 + AluSx SINE Alu 1 299 -13 1745 230 94 71 chr10 139661468 139661917 -654848 + L1MC4 LINE L1 7234 7710 -332 1988 125 3 16 chr10 139661917 139662221 -654544 - AluJo SINE Alu -12 300 1 1745 230 94 71 chr10 139662221 139662544 -654221 + L1MC4 LINE L1 7710 8024 -18 429 133 0 84 chr10 139663436 139663519 -653246 + SVA Other Other 451 526 -860 22 0 0 0 chr10 139663605 139663627 -653138 + AT_rich Low_complexity Low_complexity 1 22 0 226 266 38 25 chr10 139664136 139664215 -652550 + L1MD3 LINE L1 7896 7975 -20 2270 107 0 0 chr10 139664265 139664575 -652190 + AluSg SINE Alu 1 310 0 572 236 113 31 chr10 139664675 139664870 -651895 - MLT1L LTR MaLR -55 560 350 184 197 0 115 chr10 139665464 139665525 -651240 + MIR SINE MIR 130 183 -79 1908 91 51 11 chr10 139665549 139665824 -650941 + AluSx SINE Alu 1 286 -26 2366 72 0 3 chr10 139665824 139666130 -650635 + AluY SINE Alu 6 310 -1 2315 96 0 6 chr10 139666849 139667163 -649602 + AluSq SINE Alu 1 312 -1 817 248 56 98 chr10 139667639 139668304 -648461 + L1MEd LINE L1 553 1189 -4930 1299 118 5 5 chr10 139668330 139668525 -648240 + AluSg SINE Alu 1 195 -115 446 128 218 0 chr10 139668528 139668606 -648159 + AluSq SINE Alu 68 162 -151 236 330 37 9 chr10 139668608 139668717 -648048 + L2 LINE L2 2694 2805 -509 606 282 11 22 chr10 139669161 139669342 -647423 - L1ME3 LINE L1 -298 5864 5686 749 164 25 0 chr10 139669554 139669676 -647089 - FLAM_C SINE Alu -7 126 2 2115 97 0 3 chr10 139669686 139669974 -646791 - AluSg SINE Alu -23 287 1 267 243 132 18 chr10 139670487 139670615 -646150 - MER5A DNA MER1_type -27 162 7 3157 175 75 4 chr10 139671169 139671729 -645036 + LTR43 LTR ERV1 2 601 -1 2738 174 33 4 chr10 139672093 139672604 -644161 + L1MC1 LINE L1 5634 6159 -174 5513 178 109 103 chr10 139672604 139674087 -642678 + MER52A LTR ERV1 1 1491 -264 400 244 11 0 chr10 139674084 139674174 -642591 + AluJo SINE Alu 44 134 -168 * 24 53 0 0 chr10 139674174 139674212 -642553 + AT_rich Low_complexity Low_complexity 1 38 0 331 170 63 0 chr10 139674963 139675046 -641719 - L1M2 LINE L1 -531 5632 5555 810 299 25 22 chr10 139675305 139675670 -641095 - MER89-int LTR ERV1 -3372 3429 3064 2571 133 22 35 chr10 139675674 139676125 -640640 + MER4E LTR ERV1 335 779 0 2316 167 50 16 chr10 139676125 139676510 -640255 - MER41C LTR ERV1 -111 443 40 4771 54 0 26 chr10 139676510 139676858 -639907 + LTR10C LTR ERV1 1 328 -263 2017 97 0 0 chr10 139676858 139677125 -639640 + AluSg SINE Alu 1 267 -43 4771 54 0 26 chr10 139677125 139677383 -639382 + LTR10C LTR ERV1 328 591 0 2316 167 50 16 chr10 139677383 139677425 -639340 - MER41C LTR ERV1 -514 40 1 2414 94 102 0 chr10 139677429 139677771 -638994 - MER51B LTR ERV1 0 377 1 2186 142 15 0 chr10 139677773 139678112 -638653 - MER51B-int LTR ERV1 -1 7815 7472 692 184 22 0 chr10 139678115 139678251 -638514 - LTR54B LTR ERV1 -357 141 3 7594 128 38 9 chr10 139678251 139678840 -637925 - MER51B-int LTR ERV1 -390 7147 6576 1907 87 34 4 chr10 139678840 139679104 -637661 - AluSg SINE Alu 0 310 39 7594 128 38 9 chr10 139679104 139680160 -636605 - MER51B-int LTR ERV1 -961 6576 5407 1818 133 5 6 chr10 139680137 139680548 -636217 - MER51B-int LTR ERV1 -2555 2662 2210 * 1895 158 57 7 chr10 139680527 139680557 -636208 - MER51B-int LTR ERV1 -2774 3172 3145 2377 90 0 0 chr10 139680557 139680845 -635920 + AluSq SINE Alu 1 288 -25 189 74 0 0 chr10 139680845 139680872 -635893 + (CA)n Simple_repeat Simple_repeat 2 28 0 1895 158 57 7 chr10 139680872 139681305 -635460 - MER51B-int LTR ERV1 -2800 3146 1482 * 5375 130 62 14 chr10 139681286 139682703 -634062 - MER51B-int LTR ERV1 -4489 3327 1802 570 206 53 94 chr10 139682703 139682873 -633892 - MER4A LTR ERV1 -130 534 372 7904 158 51 7 chr10 139682978 139683931 -632834 - MER51B-int LTR ERV1 -6324 1492 582 2221 101 17 3 chr10 139683931 139684227 -632538 - AluSg SINE Alu -10 300 1 7904 158 51 7 chr10 139684227 139684310 -632455 - MER51B-int LTR ERV1 -7234 582 504 297 0 0 0 chr10 139684310 139684343 -632422 + (TA)n Simple_repeat Simple_repeat 1 33 0 7904 158 51 7 chr10 139684343 139684734 -632031 - MER51B-int LTR ERV1 -7312 504 1 2196 93 135 3 chr10 139684734 139685067 -631698 - MER51B LTR ERV1 0 377 1 2067 138 10 0 chr10 139685080 139685370 -631395 + AluSx SINE Alu 1 293 -19 1505 140 19 23 chr10 139685378 139685635 -631130 + LTR8 LTR ERV1 436 691 0 731 161 8 0 chr10 139685640 139685754 -631011 - MER41A LTR ERV1 0 554 440 4685 121 18 38 chr10 139685754 139686298 -630467 + MER4E LTR ERV1 1 526 -253 317 59 39 0 chr10 139686298 139686349 -630416 + (CCCCCA)n Simple_repeat Simple_repeat 6 58 0 4685 121 18 38 chr10 139686349 139686590 -630175 + MER4E LTR ERV1 526 770 -9 2400 162 45 0 chr10 139686597 139687017 -629748 - MER41C LTR ERV1 -115 439 1 5214 88 13 0 chr10 139687155 139687837 -628928 - LTR8 LTR ERV1 0 691 1 2192 131 0 0 chr10 139687955 139688253 -628512 + AluSx SINE Alu 1 298 -14 1169 131 181 8 chr10 139688253 139688513 -628252 - MER51C LTR ERV1 -283 357 53 250 341 22 11 chr10 139688527 139688618 -628147 - MIR SINE MIR -57 205 114 1256 134 230 0 chr10 139689312 139689551 -627214 - AluJb SINE Alu -8 294 1 4760 122 79 1 chr10 139689578 139690301 -626464 - MER4E LTR ERV1 0 779 1 1917 118 46 19 chr10 139690603 139691138 -625627 - MER51A LTR ERV1 0 634 1 838 69 13 126 chr10 139691365 139691477 -625288 - MER4E LTR ERV1 0 766 676 2469 87 3 6 chr10 139691477 139691789 -624976 + AluSq SINE Alu 1 311 -2 838 69 13 126 chr10 139691789 139691835 -624930 - MER4E LTR ERV1 -90 676 626 764 132 96 0 chr10 139691837 139691973 -624792 + MER51A LTR ERV1 111 259 -375 * 3883 116 34 26 chr10 139691972 139692065 -624700 - MER4E LTR ERV1 -126 653 562 194 54 0 54 chr10 139692065 139692102 -624663 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 3883 116 34 26 chr10 139692102 139692293 -624472 - MER4E LTR ERV1 -217 562 374 2231 92 0 30 chr10 139692293 139692596 -624169 - AluSg SINE Alu -16 294 1 3883 116 34 26 chr10 139692596 139692958 -623807 - MER4E LTR ERV1 -405 374 1 336 269 132 13 chr10 139693560 139693785 -622980 - MIR SINE MIR -9 253 4 1924 173 3 0 chr10 139693910 139694217 -622548 + AluJb SINE Alu 1 308 -4 955 193 183 11 chr10 139694274 139694643 -622122 + LTR54 LTR ERV1 6 510 0 427 276 276 4 chr10 139695847 139696104 -620661 - L2 LINE L2 -2028 1286 960 1789 149 3 65 chr10 139696289 139696610 -620155 + AluJb SINE Alu 1 301 -11 228 317 29 10 chr10 139696767 139696871 -619894 + MIR SINE MIR 132 237 -25 1533 139 35 35 chr10 139697100 139697358 -619407 - AluJb SINE Alu -17 295 38 761 186 0 0 chr10 139697381 139697505 -619260 - FLAM_A SINE Alu -6 136 13 254 293 111 17 chr10 139697524 139697705 -619060 - L1 LINE L1 -1717 4429 4232 558 271 21 7 chr10 139697732 139697872 -618893 - L2 LINE L2 0 3313 3172 312 268 16 47 chr10 139698073 139698200 -618565 - LTR67 LTR ERVL -2 555 433 1826 161 0 14 chr10 139698318 139698603 -618162 + AluJb SINE Alu 11 291 -21 697 192 164 0 chr10 139698603 139698749 -618016 + MLT1D LTR MaLR 336 505 0 2058 209 70 30 chr10 139698750 139699509 -617256 + L1ME1 LINE L1 5097 5887 -279 492 191 99 21 chr10 139699511 139699652 -617113 + L1MA10 LINE L1 6180 6331 -3 351 0 0 0 chr10 139699721 139699760 -617005 + (TG)n Simple_repeat Simple_repeat 1 39 0 864 159 14 7 chr10 139699762 139699907 -616858 - AluJo SINE Alu -30 282 137 295 310 44 9 chr10 139699986 139700099 -616666 - HAL1 LINE L1 -2375 132 16 675 238 60 66 chr10 139700134 139700466 -616299 - L1MC5 LINE L1 -27 7934 7605 823 177 0 0 chr10 139700617 139700747 -616018 - AluJo SINE Alu -182 130 1 469 190 66 153 chr10 139700751 139700858 -615907 - L1MC5 LINE L1 -570 7391 7315 2452 76 0 7 chr10 139700858 139701160 -615605 - AluSg SINE Alu -10 300 1 469 190 66 153 chr10 139701160 139701294 -615471 - L1MC5 LINE L1 -646 7315 7171 1697 166 75 7 chr10 139701297 139701575 -615190 - AluJb SINE Alu -15 297 1 2439 84 0 0 chr10 139701610 139701906 -614859 - AluSq SINE Alu -17 296 1 225 0 0 0 chr10 139702274 139702299 -614466 + (TA)n Simple_repeat Simple_repeat 2 26 0 2552 63 0 0 chr10 139702299 139702598 -614167 - AluY SINE Alu -12 299 1 751 161 0 0 chr10 139703160 139703272 -613493 + FLAM_C SINE Alu 7 118 -25 2527 76 0 0 chr10 139703462 139703764 -613001 + AluSq SINE Alu 1 302 -11 1118 125 5 33 chr10 139703773 139703957 -612808 + LTR8 LTR ERV1 513 691 0 1416 189 125 0 chr10 139703957 139704317 -612448 - L1ME2 LINE L1 -238 5926 5522 7077 42 17 31 chr10 139704334 139705243 -611522 - L1PA5 LINE L1 -1 6153 5241 292 191 0 0 chr10 139705243 139705290 -611475 - Alu SINE Alu -249 53 7 7077 42 17 31 chr10 139705290 139705402 -611363 - L1PA5 LINE L1 -913 5241 5129 237 188 0 0 chr10 139705398 139705446 -611319 - L1ME2 LINE L1 -2259 5526 5479 * 2368 84 7 0 chr10 139705527 139705824 -610941 - AluSp SINE Alu -14 299 1 1792 108 119 11 chr10 139706781 139707049 -609716 + AluSg SINE Alu 1 297 -13 335 261 8 34 chr10 139708405 139708524 -608241 + MER21B-int LTR ERV1 3308 3423 -4333 264 220 73 28 chr10 139708856 139708965 -607800 + MER21B-int LTR ERV1 5721 5834 -924 637 221 24 0 chr10 139709001 139709128 -607637 - FLAM_C SINE Alu -3 130 1 1489 143 105 23 chr10 139709183 139709449 -607316 - AluJb SINE Alu -11 301 14 299 256 13 0 chr10 139709459 139709537 -607228 + MER21B-int LTR ERV1 4797 4875 -248 22 0 0 0 chr10 139710078 139710100 -606665 + GC_rich Low_complexity Low_complexity 1 22 0 227 270 19 38 chr10 139710472 139710631 -606134 + C-rich Low_complexity Low_complexity 3 158 0 947 46 30 30 chr10 139712053 139712184 -604581 - FLAM_C SINE Alu -2 131 1 348 139 81 81 chr10 139712958 139713044 -603721 - FRAM SINE Alu -6 160 75 199 336 18 36 chr10 139713349 139713459 -603306 - MIR3 SINE MIR 0 208 101 185 274 43 103 chr10 139713908 139714025 -602740 - MER5B DNA MER1_type -60 118 9 570 251 157 3 chr10 139714909 139715199 -601566 + MLT1A1 LTR MaLR 1 348 -17 234 293 12 37 chr10 139715270 139715352 -601413 + MER21B LTR ERV1 1 80 -783 2232 83 14 7 chr10 139715359 139715649 -601116 - AluSq SINE Alu -16 297 6 292 177 0 16 chr10 139715661 139715723 -601042 - MER41A LTR ERV1 -94 460 400 213 158 0 118 chr10 139715961 139716037 -600728 + (TTGGGG)n Simple_repeat Simple_repeat 2 68 0 486 252 163 31 chr10 139716075 139716333 -600432 + MER21B LTR ERV1 446 737 -126 287 278 56 14 chr10 139717561 139717705 -599060 + L1MC/D LINE L1 5124 5273 -873 233 320 80 0 chr10 139717799 139717949 -598816 + L1MC/D LINE L1 5275 5436 -728 1700 193 28 0 chr10 139717965 139718255 -598510 + AluJo SINE Alu 1 298 -14 672 158 114 0 chr10 139720258 139720372 -596393 - FLAM_C SINE Alu -6 127 1 314 248 110 28 chr10 139722098 139722207 -594558 - L1ME3A LINE L1 -45 6125 6008 1930 90 41 0 chr10 139722472 139722738 -594027 - AluSq SINE Alu -36 277 1 247 274 142 38 chr10 139723192 139723298 -593467 + MER5A DNA MER1_type 25 141 -48 202 250 0 42 chr10 139723657 139723705 -593060 + L2 LINE L2 3182 3227 -86 21 0 0 0 chr10 139724397 139724418 -592347 + AT_rich Low_complexity Low_complexity 1 21 0 2185 115 20 0 chr10 139725470 139725766 -590999 + AluSx SINE Alu 1 302 -10 1680 148 40 7 chr10 139725800 139726078 -590687 + AluJo SINE Alu 7 293 -19 315 288 98 31 chr10 139726407 139726570 -590195 + L1MC/D LINE L1 5470 5643 -2165 214 340 43 0 chr10 139926860 139926954 -389811 - L2 LINE L2 0 3272 3175 1554 275 13 11 chr10 139933064 139933533 -383232 - L1MEc LINE L1 -1559 4656 4187 1112 251 29 10 chr10 139933546 139933957 -382808 - L1MEc LINE L1 -2884 3331 2913 274 297 67 12 chr10 139934940 139935105 -381660 + (CCCCAG)n Simple_repeat Simple_repeat 6 179 0 217 235 22 67 chr10 139937993 139938172 -378593 + (CCCA)n Simple_repeat Simple_repeat 4 174 0 273 184 11 23 chr10 139944219 139944306 -372459 + C-rich Low_complexity Low_complexity 3 88 0 840 153 93 38 chr10 139946517 139946615 -370150 + Tigger1 DNA MER2_type 2223 2314 -104 2049 118 12 108 chr10 139946615 139947030 -369735 - THE1C LTR MaLR 0 375 1 840 153 93 38 chr10 139947030 139947114 -369651 + Tigger1 DNA MER2_type 2314 2415 -3 391 225 12 24 chr10 139947114 139947375 -369390 + (CA)n Simple_repeat Simple_repeat 1 257 0 2716 141 29 18 chr10 139947509 139948000 -368765 - Tigger1 DNA MER2_type -194 2224 1729 * 7000 137 41 14 chr10 139947994 139948378 -368387 - Tigger1 DNA MER2_type -1064 1354 982 2252 90 0 3 chr10 139948378 139948677 -368088 + AluSx SINE Alu 1 298 -14 7000 137 41 14 chr10 139948677 139949577 -367188 - Tigger1 DNA MER2_type -1436 982 35 495 191 14 26 chr10 139949629 139950139 -366626 + (TG)n Simple_repeat Simple_repeat 1 504 0 343 167 10 10 chr10 139950189 139950285 -366480 + (TG)n Simple_repeat Simple_repeat 2 97 0 209 135 27 0 chr10 139950784 139950821 -365944 + T-rich Low_complexity Low_complexity 2 39 0 473 275 87 31 chr10 139951859 139952259 -364506 - MLT1D LTR MaLR -38 467 5 209 186 0 0 chr10 139953077 139953120 -363645 + C-rich Low_complexity Low_complexity 6 48 0 608 306 108 52 chr10 139953313 139953663 -363102 - L1MEc LINE L1 -3930 2466 2137 2201 73 0 20 chr10 139953663 139953983 -362782 - AluY SINE Alu 0 311 1 608 306 108 52 chr10 139953983 139954291 -362474 - L1MEc LINE L1 -4259 2137 1771 358 280 13 33 chr10 139954425 139954575 -362190 - L1MEc LINE L1 -4650 1746 1600 245 193 30 30 chr10 139956009 139956175 -360590 + (CCCCG)n Simple_repeat Simple_repeat 3 168 0 359 311 23 17 chr10 139956213 139956390 -360375 + (CCCCG)n Simple_repeat Simple_repeat 2 179 0 308 317 87 10 chr10 139958842 139958946 -357819 - L1MCa LINE L1 -4317 2109 1998 505 211 0 27 chr10 139958947 139959132 -357633 + (CA)n Simple_repeat Simple_repeat 1 180 0 295 266 28 28 chr10 139960135 139960312 -356453 + (CGTG)n Simple_repeat Simple_repeat 1 177 0 341 305 23 11 chr10 139960346 139960523 -356242 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 * 463 262 6 22 chr10 139960471 139960704 -356061 + (TG)n Simple_repeat Simple_repeat 1 229 0 310 188 78 0 chr10 139963519 139963583 -353182 - MER31A LTR ERV1 0 485 417 935 137 122 15 chr10 140014059 140014256 -302509 - LTR12 LTR ERV1 -444 270 53 247 231 0 0 chr10 140014256 140014308 -302457 - LTR30 LTR ERV1 -670 52 1 2164 112 6 10 chr10 140014339 140014652 -302113 + AluSq SINE Alu 2 313 0 7957 71 17 1 chr10 140015475 140016466 -300299 - LTR13 LTR ERVK 0 1007 1 1652 202 3 3 chr10 140019060 140019357 -297408 + AluJo SINE Alu 1 297 -15 211 135 19 106 chr10 140020950 140021054 -295711 + G-rich Low_complexity Low_complexity 4 98 0 805 191 21 69 chr10 140021918 140022107 -294658 - AluJo SINE Alu -39 273 94 379 259 56 14 chr10 140022107 140022250 -294515 + Tigger3(Golem) DNA MER2_type 2827 2975 -54 1436 126 0 0 chr10 140022262 140022476 -294289 - AluSg/x SINE Alu -11 301 88 257 329 112 0 chr10 140022919 140023062 -293703 - MER20B DNA MER1_type -597 186 28 2308 91 0 3 chr10 140023211 140023519 -293246 - AluY SINE Alu -3 308 2 202 370 133 0 chr10 140023993 140024166 -292599 - MIR SINE MIR -46 216 21 7889 67 15 18 chr10 140024427 140025437 -291328 - LTR13 LTR ERVK 0 1007 1 1513 143 167 0 chr10 140025717 140025975 -290790 - AluJb SINE Alu -1 301 1 186 351 64 11 chr10 140027814 140027908 -288857 - MIR SINE MIR -55 207 109 2522 64 0 6 chr10 140028012 140028325 -288440 + AluY SINE Alu 1 311 0 312 373 93 12 chr10 140028441 140028602 -288163 + L1M4 LINE L1 4730 4903 -1243 2133 80 17 0 chr10 140028602 140028889 -287876 + AluSp SINE Alu 2 293 -20 781 144 32 0 chr10 140029255 140029380 -287385 + AluJb SINE Alu 4 132 -180 1655 175 10 7 chr10 140029433 140029724 -287041 - AluJb SINE Alu -12 300 9 2226 107 13 0 chr10 140032598 140032906 -283859 - AluSx SINE Alu 0 312 1 2052 128 7 0 chr10 140033250 140033547 -283218 + AluJb SINE Alu 1 299 -13 1940 163 0 0 chr10 140034566 140034861 -281904 - AluJb SINE Alu -17 295 1 1207 194 4 0 chr10 140035150 140035377 -281388 + AluJo SINE Alu 85 312 0 539 286 66 97 chr10 140037777 140038295 -278470 - Charlie4a DNA MER1_type -4 504 3 2269 107 3 3 chr10 140038326 140038635 -278130 - AluSc SINE Alu 0 309 1 274 77 0 0 chr10 140038656 140038695 -278070 - Alu SINE Alu -262 39 1 308 325 51 89 chr10 140040869 140041094 -275671 - L1 LINE L1 -2362 3784 3563 2352 89 0 13 chr10 140041103 140041419 -275346 - AluSq SINE Alu -1 312 1 470 164 58 19 chr10 140041440 140041544 -275221 - FLAM_A SINE Alu -1 141 34 524 238 117 4 chr10 140041712 140041985 -274780 - L1 LINE L1 -2789 3357 3054 664 307 80 7 chr10 140042035 140042514 -274251 - L1 LINE L1 -3198 2948 2445 1578 164 39 35 chr10 140044218 140044528 -272237 + AluJo SINE Alu 1 311 -1 361 276 6 44 chr10 140045057 140045238 -271527 + G-rich Low_complexity Low_complexity 2 175 0 4695 143 50 52 chr10 140047416 140047719 -269046 + L1MA4 LINE L1 4044 4346 -1800 2330 93 0 3 chr10 140047719 140048030 -268735 + AluSp SINE Alu 1 310 -3 4695 143 50 52 chr10 140048030 140048669 -268096 + L1MA4 LINE L1 4346 4985 -1161 1901 106 0 0 chr10 140048669 140048925 -267840 + AluSg1 SINE Alu 44 299 -10 4695 143 50 52 chr10 140048925 140049132 -267633 + L1MA4 LINE L1 4985 5191 -955 982 121 7 0 chr10 140049132 140049272 -267493 + FRAM SINE Alu 1 140 -36 4107 145 44 5 chr10 140049280 140050321 -266444 + L1MA4 LINE L1 5175 6303 -1 2527 220 73 35 chr10 140050306 140051162 -265603 + L1ME LINE L1 4393 5322 -844 * 2039 141 16 0 chr10 140051162 140051467 -265298 + AluJb SINE Alu 1 310 -2 2527 220 73 35 chr10 140051467 140051933 -264832 + L1ME LINE L1 5322 5769 -397 268 217 24 12 chr10 140052106 140052189 -264576 + (TCTCTG)n Simple_repeat Simple_repeat 4 87 0 267 154 0 103 chr10 140053146 140053321 -263444 + (CACCC)n Simple_repeat Simple_repeat 1 157 0 192 148 0 99 chr10 140053333 140053434 -263331 + (CCCTG)n Simple_repeat Simple_repeat 5 95 0 209 290 43 0 chr10 140053557 140053626 -263139 + MIR3 SINE MIR 88 159 -49 438 248 17 0 chr10 140053641 140053758 -263007 + L1ME LINE L1 5582 5700 -464 1767 138 10 14 chr10 140053774 140054063 -262702 + AluJo SINE Alu 11 298 -14 2221 100 3 25 chr10 140054063 140054383 -262382 + AluSp SINE Alu 1 313 0 507 274 39 11 chr10 140054740 140054919 -261846 - MER53 DNA DNA -5 184 1 312 170 64 5 chr10 140055624 140055852 -260913 + (CA)n Simple_repeat Simple_repeat 1 241 0 198 94 19 38 chr10 140055874 140055927 -260838 + (CA)n Simple_repeat Simple_repeat 2 53 0 1773 141 39 0 chr10 140056506 140056789 -259976 - AluJb SINE Alu -18 294 1 1250 126 178 63 chr10 140057239 140057382 -259383 + AluJo SINE Alu 1 126 -176 2300 95 3 0 chr10 140057382 140057688 -259077 + AluSx SINE Alu 6 312 0 1250 126 178 63 chr10 140057688 140057814 -258951 + AluJo SINE Alu 126 301 -1 275 195 23 62 chr10 140062865 140062993 -253772 + G-rich Low_complexity Low_complexity 4 126 0 2167 116 3 0 chr10 140064894 140065205 -251560 - AluJo SINE Alu 0 312 1 183 279 49 16 chr10 140065373 140065434 -251331 + MER5B DNA MER1_type 103 165 -13 324 301 35 17 chr10 140065644 140065817 -250948 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 233 287 43 0 chr10 140065842 140065936 -250829 + (CCCCAG)n Simple_repeat Simple_repeat 4 101 0 367 282 35 23 chr10 140065961 140066135 -250630 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 560 313 94 35 chr10 140066264 140066314 -250451 + L1MC4a LINE L1 7046 7092 -716 2202 97 0 23 chr10 140066314 140066623 -250142 + AluY SINE Alu 1 302 -9 560 313 94 35 chr10 140066623 140067007 -249758 + L1MC4a LINE L1 7092 7506 -302 416 209 9 19 chr10 140067127 140067232 -249533 + L1MD3 LINE L1 7892 7995 0 418 197 9 60 chr10 140075234 140075618 -241147 + (CAGCC)n Simple_repeat Simple_repeat 1 364 0 214 138 0 69 chr10 140075642 140075729 -241036 + (CAGCC)n Simple_repeat Simple_repeat 4 84 0 180 139 0 28 chr10 140079447 140079483 -237282 + MIR SINE MIR 113 147 -115 933 338 92 20 chr10 140079694 140080562 -236203 - L1M4 LINE L1 -1712 4434 3504 2527 36 0 3 chr10 140080580 140080882 -235883 - AluY SINE Alu -10 301 1 1165 106 18 0 chr10 140080882 140081052 -235713 - AluSg/x SINE Alu -5 305 133 474 227 0 39 chr10 140081409 140081537 -235228 - MER53 DNA DNA -65 124 2 1531 194 51 0 chr10 140081586 140081880 -234885 + AluJb SINE Alu 1 309 -3 228 271 71 0 chr10 140082812 140082897 -233868 - LTR16A1 LTR ERVL -147 310 220 323 303 101 28 chr10 140083586 140083764 -233001 - L1M4 LINE L1 -780 5366 5176 25 31 0 0 chr10 140085394 140085426 -231339 + GC_rich Low_complexity Low_complexity 1 32 0 222 127 0 95 chr10 140086457 140086520 -230245 + (CCCCAG)n Simple_repeat Simple_repeat 1 57 0 184 51 26 51 chr10 140086622 140086661 -230104 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 369 189 32 60 chr10 140086746 140086931 -229834 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 2130 92 0 0 chr10 140087322 140087652 -229113 - AluY SINE Alu 0 330 1 2283 100 0 0 chr10 140087652 140087952 -228813 - AluY SINE Alu -11 300 1 264 264 35 35 chr10 140087962 140088049 -228716 - L1MC4 LINE L1 0 8042 7956 907 161 17 6 chr10 140088084 140088264 -228501 - MSTB1 LTR MaLR -55 377 196 1333 165 97 4 chr10 140088264 140088512 -228253 - AluJb SINE Alu -14 298 28 2052 211 35 39 chr10 140088782 140089661 -227104 - LTR13 LTR ERVK -64 943 16 1802 71 8 25 chr10 140089674 140089914 -226851 + AluY SINE Alu 57 292 -19 805 126 0 0 chr10 140089924 140090035 -226730 + AluY SINE Alu 1 111 -200 1269 81 0 240 chr10 140090035 140090394 -226371 + LTR12 LTR ERV1 1 273 -441 326 206 0 0 chr10 140090421 140090494 -226271 + LTR30 LTR ERV1 552 624 -98 648 164 41 0 chr10 140090494 140090616 -226149 + pTR5 LTR ERV1 49 175 -2263 1275 113 38 0 chr10 140090616 140090802 -225963 + AluY SINE Alu 105 297 -14 678 190 50 1 chr10 140090805 140090968 -225797 - MSTB1 LTR MaLR -234 162 4 228 261 22 76 chr10 140091246 140091338 -225427 + L2 LINE L2 3179 3265 -7 2318 49 0 14 chr10 140091493 140091805 -224960 - AluY SINE Alu 0 308 1 2243 103 3 0 chr10 140091807 140092117 -224648 - AluSq SINE Alu -2 311 1 1011 209 58 26 chr10 140092149 140092418 -224347 - L1M4 LINE L1 -398 5768 5505 1931 82 89 0 chr10 140092418 140092687 -224078 - AluSc SINE Alu -15 294 2 1011 209 58 26 chr10 140092687 140092732 -224033 - L1M4 LINE L1 -661 5505 5463 1631 168 47 47 chr10 140092736 140093118 -223647 - MLT1B LTR MaLR -8 382 1 745 220 6 0 chr10 140093138 140093320 -223445 - L1M4 LINE L1 -742 5436 5254 2125 118 3 6 chr10 140093328 140093641 -223124 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 140093642 140093663 -223102 + AT_rich Low_complexity Low_complexity 1 21 0 633 189 118 6 chr10 140093664 140093833 -222932 - L1MA3 LINE L1 -1 6304 6117 639 144 93 34 chr10 140093833 140093951 -222814 + FLAM_C SINE Alu 1 125 -18 1681 168 74 100 chr10 140094494 140094924 -221841 - LTR8 LTR ERV1 0 691 272 2579 46 0 0 chr10 140094924 140095229 -221536 - AluY SINE Alu -6 305 1 1681 168 74 100 chr10 140095229 140095256 -221509 - LTR8 LTR ERV1 -419 272 246 1377 146 47 8 chr10 140095989 140096242 -220523 - LTR8 LTR ERV1 -428 263 1 1874 156 71 51 chr10 140096499 140097106 -219659 - MER4B LTR ERV1 0 779 1 2218 105 10 0 chr10 140097140 140097446 -219319 + AluSx SINE Alu 1 309 -3 2010 124 17 0 chr10 140097943 140098233 -218532 - AluSx SINE Alu -17 295 1 608 116 25 70 chr10 140098959 140099457 -217308 + (TCTCTG)n Simple_repeat Simple_repeat 1 475 0 207 170 43 0 chr10 140099462 140099509 -217256 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 392 326 6 17 chr10 140099804 140099982 -216783 + (CGTG)n Simple_repeat Simple_repeat 2 177 0 375 236 0 0 chr10 140100534 140100695 -216070 + (TG)n Simple_repeat Simple_repeat 2 162 0 25 0 0 0 chr10 140101644 140101669 -215096 + GC_rich Low_complexity Low_complexity 1 25 0 2222 97 13 0 chr10 140102791 140103090 -213675 - AluSg SINE Alu -7 303 1 26 0 0 0 chr10 140106973 140106999 -209766 + GC_rich Low_complexity Low_complexity 1 26 0 500 250 37 60 chr10 140109863 140110079 -206686 - L1ME LINE L1 -3653 2427 2217 499 179 57 24 chr10 140110080 140110203 -206562 + LTR50 LTR ERVL 1 127 -668 683 352 89 13 chr10 140110204 140110659 -206106 - L1ME LINE L1 -4874 1387 787 231 264 39 45 chr10 140110713 140110868 -205897 - L1M4 LINE L1 -1353 4793 4640 1014 196 79 1 chr10 140110880 140111213 -205552 - MLT1B LTR MaLR 0 390 1 421 269 156 19 chr10 140111220 140111380 -205385 - L1M4 LINE L1 -1529 4617 4436 2185 98 0 20 chr10 140111400 140111706 -205059 - AluSx SINE Alu -7 305 6 296 362 103 8 chr10 140112270 140112648 -204117 - L1M4 LINE L1 -2017 4129 3716 652 311 87 58 chr10 140112761 140113173 -203592 - HAL1 LINE L1 -1233 1274 851 210 272 19 39 chr10 140114513 140114616 -202149 + G-rich Low_complexity Low_complexity 1 101 0 541 98 0 72 chr10 140116286 140116480 -200285 + (CCCTAA)n Simple_repeat Simple_repeat 1 180 0 312 192 0 40 chr10 140116524 140116675 -200090 + (CCCTAA)n Simple_repeat Simple_repeat 1 145 0 196 179 32 24 chr10 140116711 140116834 -199931 + (CCCTAA)n Simple_repeat Simple_repeat 5 128 0 560 109 16 55 chr10 140116866 140117049 -199716 + (CCCTAA)n Simple_repeat Simple_repeat 3 178 0 574 139 7 60 chr10 140117067 140117364 -199401 + (CCCTAA)n Simple_repeat Simple_repeat 1 281 0 1382 147 44 27 chr10 140119384 140119677 -197088 - MLT1A1 LTR MaLR -56 309 12 1612 201 0 23 chr10 140120036 140120340 -196425 - AluJo SINE Alu -15 297 1 493 231 23 0 chr10 140120353 140120483 -196282 - L1ME LINE L1 -297 5824 5692 282 115 164 0 chr10 140120712 140120773 -195992 + MER31B LTR ERV1 23 93 -373 653 72 31 0 chr10 140120773 140120870 -195895 + MSTA LTR MaLR 1 100 -328 2067 157 65 18 chr10 140120870 140121424 -195341 - MER4A-int LTR ERV1 -4858 1740 1161 495 0 0 0 chr10 140121424 140121479 -195286 + (CA)n Simple_repeat Simple_repeat 2 56 0 3285 143 175 78 chr10 140121479 140122490 -194275 - MER4A-int LTR ERV1 -5489 1109 1 1822 142 28 127 chr10 140122493 140122965 -193800 - MER4A LTR ERV1 0 664 240 317 311 89 39 chr10 140123103 140123383 -193382 - L1 LINE L1 -1786 4360 4067 675 226 85 6 chr10 140124468 140124632 -192133 - MER45A DNA AcHobo -1 177 1 294 264 140 51 chr10 140124962 140125254 -191511 + L2 LINE L2 2820 3137 -176 343 319 17 0 chr10 140126153 140126269 -190496 + (TCCA)n Simple_repeat Simple_repeat 3 120 0 253 224 15 0 chr10 140128075 140128142 -188623 + (CAG)n Simple_repeat Simple_repeat 2 69 0 23 0 0 0 chr10 140129084 140129107 -187658 + AT_rich Low_complexity Low_complexity 1 23 0 349 236 57 0 chr10 140129610 140129716 -187049 + L1M4 LINE L1 2903 3014 -3132 235 185 77 0 chr10 140129746 140129811 -186954 + L1P LINE L1 3886 3955 -2191 245 263 85 25 chr10 140129829 140129947 -186818 + L1M4 LINE L1 4022 4146 -2000 347 244 59 15 chr10 140130770 140130905 -185860 + L1M4 LINE L1 4464 4604 -1542 3657 165 76 1 chr10 140130916 140131590 -185175 - ERVL LTR ERVL -643 5121 4398 2177 201 31 24 chr10 140131590 140132043 -184722 + HERVL74 LTR ERVL 3087 3542 -2143 12257 138 9 15 chr10 140132207 140133424 -183341 - L1PA10 LINE L1 -9 7597 6374 2116 127 3 3 chr10 140133424 140133723 -183042 - AluSc SINE Alu -10 299 1 12257 138 9 15 chr10 140133723 140135289 -181476 - L1PA10 LINE L1 -1232 6374 4807 7632 165 7 1 chr10 140135289 140136568 -180197 - L1PA10 LINE L1 -3075 4509 3223 4027 261 39 65 chr10 140136569 140138461 -178304 - L1PA10 LINE L1 -4915 2669 1 3477 207 102 14 chr10 140138465 140139277 -177488 + HERVL74 LTR ERVL 3653 4536 -1149 2587 143 19 25 chr10 140139278 140139710 -177055 + MSTB1 LTR MaLR 1 429 -3 785 212 140 44 chr10 140139739 140139989 -176776 + HERVL74 LTR ERVL 4862 5135 -550 1390 203 38 100 chr10 140139992 140140391 -176374 + MLT1A2 LTR MaLR 1 374 0 511 164 36 36 chr10 140140396 140140506 -176259 + MLT1A2-int LTR MaLR 6 115 -1620 472 69 46 46 chr10 140140518 140140605 -176160 - MER110-int LTR ERV1 -2782 3816 3730 898 136 15 56 chr10 140140685 140140883 -175882 - MER110-int LTR ERV1 -2869 3729 3540 391 218 9 45 chr10 140140972 140141082 -175683 - MER110-int LTR ERV1 -4281 2477 2372 2363 84 0 0 chr10 140141098 140141571 -175194 + AluSc SINE Alu 1 473 0 2777 122 9 29 chr10 140141666 140142110 -174655 - L1PB1 LINE L1 -57 6094 5660 426 118 0 53 chr10 140142110 140142176 -174589 + L1PB1 LINE L1 6080 6151 0 6635 119 11 10 chr10 140142205 140143173 -173592 + LTR5 LTR ERVK 1 969 0 568 326 34 46 chr10 140143589 140144223 -172542 - MER110-int LTR ERV1 -1383 6154 2365 795 83 19 0 chr10 140144453 140144561 -172204 + MLT2A2 LTR ERVL 293 402 -51 1056 131 0 0 chr10 140144664 140144879 -171886 + (TCCA)n Simple_repeat Simple_repeat 1 215 0 1771 147 6 50 chr10 140145797 140145913 -170852 + AluJb SINE Alu 5 125 -187 1879 132 7 10 chr10 140145913 140146202 -170563 - AluSc SINE Alu -21 288 1 1771 147 6 50 chr10 140146202 140146405 -170360 + AluJb SINE Alu 125 310 -2 288 299 55 0 chr10 140156054 140156181 -160584 - L1M4 LINE L1 -2154 3992 3859 371 215 117 12 chr10 140156773 140156933 -159832 - L1M4 LINE L1 -4604 2534 2216 29 0 0 0 chr10 140156959 140156988 -159777 + AT_rich Low_complexity Low_complexity 1 29 0 324 48 24 0 chr10 140156999 140157041 -159724 - U7 snRNA snRNA -20 43 1 397 265 44 0 chr10 140157041 140157177 -159588 - L1M4 LINE L1 -4731 2228 2087 875 224 30 45 chr10 140157386 140157832 -158933 - L1M4 LINE L1 -4835 2124 10 536 322 107 8 chr10 140158119 140158599 -158166 - L1ME LINE L1 -385 6580 6061 2297 53 46 3 chr10 140158795 140159078 -157687 + AluY SINE Alu 1 295 -16 251 62 0 42 chr10 140159485 140159533 -157232 + MER4-int LTR ERV1 1111 1156 -5442 224 79 53 0 chr10 140159535 140159573 -157192 + (TATG)n Simple_repeat Simple_repeat 4 43 0 338 325 67 28 chr10 140161373 140161628 -155137 - L1ME LINE L1 -581 5583 5319 282 159 0 0 chr10 140161841 140161885 -154880 + Alu SINE Alu 250 293 -9 1924 301 109 42 chr10 140162109 140162188 -154577 - L1ME LINE L1 -1353 4793 4721 3318 172 26 11 chr10 140162188 140162759 -154006 + LTR22 LTR ERVK 1 580 0 1924 301 109 42 chr10 140162759 140164507 -152258 - L1ME LINE L1 -1425 4721 2843 381 264 8 8 chr10 140164505 140164630 -152135 - L1MC5 LINE L1 -33 7928 7804 * 363 245 41 0 chr10 140164727 140164825 -151940 - L1ME LINE L1 -3318 2828 2727 935 149 98 4 chr10 140164883 140165091 -151674 + MER57A LTR ERV1 153 432 -2 1714 141 8 0 chr10 140165535 140165790 -150975 - AluJo SINE Alu -27 285 29 2599 231 105 55 chr10 140165794 140166627 -150138 - L1ME LINE L1 -1158 5783 4882 2293 138 25 0 chr10 140166627 140166981 -149784 + THE1B LTR MaLR 2 364 0 2599 231 105 55 chr10 140166981 140167236 -149529 - L1ME LINE L1 -2059 4882 4641 1430 193 15 15 chr10 140167250 140167519 -149246 - L1MB5 LINE L1 0 6174 5906 1064 258 99 9 chr10 140167519 140168022 -148743 - L1MCc LINE L1 -4887 1536 1121 297 284 64 57 chr10 140168075 140168216 -148549 - L1MCc LINE L1 -5416 1007 866 889 296 55 59 chr10 140169420 140169964 -146801 - L1ME3A LINE L1 -20 6736 6195 906 280 77 0 chr10 140169984 140170295 -146470 - L1ME3A LINE L1 -1299 5433 5099 199 76 76 25 chr10 140170896 140170975 -145790 + (TTATA)n Simple_repeat Simple_repeat 5 87 0 1284 148 9 14 chr10 140171020 140171237 -145528 - L1 LINE L1 -1866 4280 4065 * 6672 249 48 32 chr10 140171209 140173413 -143352 - L1ME3A LINE L1 -4090 2644 477 2528 93 0 0 chr10 140173413 140173725 -143040 - AluSx SINE Alu 0 312 1 6672 249 48 32 chr10 140173725 140173981 -142784 - L1ME3A LINE L1 -6257 477 262 1168 228 49 18 chr10 140173981 140174310 -142455 - MER44D DNA MER2_type 0 609 1 6672 249 48 32 chr10 140174310 140174406 -142359 - L1ME3A LINE L1 -6472 262 169 481 292 42 14 chr10 140174409 140174803 -141962 - L1M3de LINE L1 -5212 1441 646 7185 32 0 0 chr10 140174877 140175756 -141009 - L1P1 LINE L1 -1894 4252 3374 * 9289 18 0 0 chr10 140175754 140176970 -139795 + L1P1 LINE L1 4265 5480 -675 2092 124 17 0 chr10 140178020 140178310 -138455 + AluSx SINE Alu 1 295 -17 2010 130 7 0 chr10 140178808 140179115 -137650 - AluY SINE Alu -2 309 1 397 227 184 7 chr10 140180764 140180905 -135860 + MER58B DNA MER1_type 176 341 0 3837 191 47 51 chr10 140181956 140182914 -133851 - LTR13 LTR ERVK 0 954 1 451 181 191 0 chr10 140185746 140185851 -130914 + FLAM_A SINE Alu 1 125 -8 2200 86 10 3 chr10 140185867 140186157 -130608 + AluSx SINE Alu 1 292 -20 2289 116 0 0 chr10 140186308 140186609 -130156 - AluSx SINE Alu -11 301 1 267 31 0 0 chr10 140186723 140186755 -130010 + (TG)n Simple_repeat Simple_repeat 1 32 0 949 146 39 28 chr10 140188026 140188204 -128561 - AluJb SINE Alu -56 256 77 714 184 89 0 chr10 140188206 140188374 -128391 - L1MB3 LINE L1 -53 6130 5948 421 240 32 8 chr10 140188419 140188544 -128221 + MLT1A1 LTR MaLR 24 151 -214 325 267 165 17 chr10 140189112 140189288 -127477 + MLT1A1 LTR MaLR 173 374 0 2353 93 0 6 chr10 140190581 140190894 -125871 - AluSx SINE Alu -1 311 1 304 207 35 48 chr10 140192052 140192197 -124568 + (CCCCG)n Simple_repeat Simple_repeat 5 147 0 231 36 0 0 chr10 140197364 140197392 -119373 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 2219 100 0 0 chr10 140197392 140197672 -119093 - AluSx SINE Alu -32 280 1 1370 216 17 44 chr10 140197673 140197826 -118939 - Charlie1 DNA MER1_type -268 2493 2337 2305 102 3 0 chr10 140197826 140198121 -118644 - AluSp SINE Alu -17 296 1 1370 216 17 44 chr10 140198121 140198328 -118437 - Charlie1 DNA MER1_type -424 2337 2143 739 209 11 17 chr10 140198345 140198522 -118243 + AluJo SINE Alu 2 177 -135 4370 10 0 0 chr10 140198623 140199153 -117612 + L1PA2 LINE L1 5667 6196 0 258 247 118 0 chr10 140199276 140199369 -117396 + HAL1b LINE L1 862 965 -383 1083 124 70 0 chr10 140199455 140199640 -117125 + MSTB1 LTR MaLR 1 198 -234 3028 91 35 7 chr10 140199645 140200075 -116690 + MLT2A1 LTR ERVL 3 444 0 30777 113 9 14 chr10 140200075 140204816 -111949 + HERVL-A1 LTR ERVL 1 4616 -872 8486 54 9 0 chr10 140204816 140205814 -110951 + LTR13 LTR ERVK 1 1007 0 30777 113 9 14 chr10 140205814 140206526 -110239 + HERVL-A1 LTR ERVL 4616 5330 -158 2562 87 51 15 chr10 140206527 140206870 -109895 + MLT2A1 LTR ERVL 39 399 -45 207 100 0 0 chr10 140206870 140206900 -109865 + (TA)n Simple_repeat Simple_repeat 1 30 0 2562 87 51 15 chr10 140206900 140206948 -109817 + MLT2A1 LTR ERVL 399 444 0 10810 99 13 10 chr10 140206952 140208521 -108244 + THE1A-int LTR MaLR 6 1580 0 2661 88 3 25 chr10 140208521 140208884 -107881 + THE1A LTR MaLR 1 355 0 1256 129 13 22 chr10 140208906 140209130 -107635 + MSTB1 LTR MaLR 211 432 0 440 267 129 63 chr10 140209654 140209909 -106856 + HAL1b LINE L1 986 1257 -91 1992 243 82 65 chr10 140209926 140211216 -105549 - L1ME2 LINE L1 -3 6161 4824 2133 129 10 0 chr10 140211216 140211510 -105255 + AluSx SINE Alu 1 297 -15 1992 243 82 65 chr10 140211510 140212091 -104674 - L1ME2 LINE L1 -1340 4824 4254 306 244 13 13 chr10 140212125 140212203 -104562 + MLT1E3 LTR MaLR 140 217 -407 1738 176 54 17 chr10 140212203 140212555 -104210 + L1M3f LINE L1 6 370 -4958 1594 169 7 19 chr10 140212659 140212966 -103799 + L1M3f LINE L1 388 690 -4638 12481 168 59 29 chr10 140213007 140216023 -100742 + L1MA4A LINE L1 14 2938 -4007 1972 144 6 19 chr10 140216023 140216336 -100429 + AluSg SINE Alu 2 310 0 12481 168 59 29 chr10 140216336 140218127 -98638 + L1MA4A LINE L1 2938 4674 -2271 2029 167 108 5 chr10 140218127 140218516 -98249 + MSTB1 LTR MaLR 4 432 0 12481 168 59 29 chr10 140218516 140220209 -96556 + L1MA4A LINE L1 4674 6705 -240 274 154 86 37 chr10 140226776 140226938 -89827 + (CAGCC)n Simple_repeat Simple_repeat 4 173 0 1371 212 123 30 chr10 140227841 140228247 -88518 - L1MC3 LINE L1 -83 7702 7259 1342 155 78 0 chr10 140229338 140229583 -87182 - MSTA LTR MaLR 0 428 165 865 213 50 5 chr10 140230596 140230798 -85967 + MER20 DNA MER1_type 1 211 -8 2198 265 76 26 chr10 140231277 140232091 -84674 + L1ME1 LINE L1 5307 6161 -5 406 289 100 21 chr10 140232099 140232390 -84375 + L1M4 LINE L1 2944 3257 -2889 603 210 8 8 chr10 140232397 140232521 -84244 + FLAM_A SINE Alu 18 141 -1 671 288 30 24 chr10 140232521 140232851 -83914 + L1M4 LINE L1 3270 3601 -2545 3300 60 2 2 chr10 140232851 140233264 -83501 - L1PA7 LINE L1 -3 6151 5739 2363 51 5 0 chr10 140233264 140233634 -83131 + L1P3 LINE L1 5196 5567 -587 913 275 131 33 chr10 140233638 140234220 -82545 + L1M4 LINE L1 3609 4247 -1899 1772 196 178 0 chr10 140235616 140235998 -80767 + LTR47A LTR ERVL 3 452 0 2534 195 33 50 chr10 140237971 140238191 -78574 + L1MA9 LINE L1 5566 5788 -524 3642 138 35 3 chr10 140238191 140238785 -77980 + L1MA5A LINE L1 5685 6297 0 2534 195 33 50 chr10 140238785 140239230 -77535 + L1MA9 LINE L1 5788 6220 -92 237 33 0 0 chr10 140239232 140239262 -77503 + (TG)n Simple_repeat Simple_repeat 2 31 0 252 266 55 37 chr10 140239742 140239851 -76914 + MLT1H LTR MaLR 340 450 -99 312 186 186 31 chr10 140239944 140240041 -76724 + L1ME4a LINE L1 5997 6108 -13 207 0 0 0 chr10 140241381 140241404 -75361 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1701 157 46 0 chr10 140241439 140241720 -75045 + AluJb SINE Alu 1 294 -18 786 210 17 17 chr10 140241758 140241934 -74831 + AluJb SINE Alu 122 297 -15 42 0 0 0 chr10 140241934 140241976 -74789 + AT_rich Low_complexity Low_complexity 1 42 0 201 39 0 0 chr10 140241976 140242002 -74763 + (TA)n Simple_repeat Simple_repeat 2 27 0 490 236 140 6 chr10 140245295 140245452 -71313 + MER45A DNA AcHobo 1 178 0 243 161 0 0 chr10 140245834 140245890 -70875 + CT-rich Low_complexity Low_complexity 2 57 0 1948 134 0 3 chr10 140247199 140247491 -69274 - AluSx SINE Alu -18 294 4 1059 218 13 0 chr10 140248959 140249282 -67483 + L1MDb LINE L1 742 1174 -5235 2134 112 3 0 chr10 140249282 140249578 -67187 + AluSx SINE Alu 1 297 -15 2728 196 41 40 chr10 140249581 140250118 -66647 + L1MB7 LINE L1 5500 6040 -144 1669 162 7 26 chr10 140250118 140250458 -66307 - AluJo SINE Alu 0 312 1 2728 196 41 40 chr10 140250458 140250603 -66162 + L1MB7 LINE L1 6040 6183 -1 1344 206 90 47 chr10 140250600 140251111 -65654 + L1MDb LINE L1 1169 1701 -4705 * 9648 164 22 24 chr10 140251113 140251568 -65197 - L1MA5 LINE L1 -2 7000 6546 2149 93 0 0 chr10 140251568 140251847 -64918 - AluSq SINE Alu -13 300 22 9648 164 22 24 chr10 140251847 140251861 -64904 - L1MA5 LINE L1 -456 6546 6533 1726 147 0 54 chr10 140251861 140252174 -64591 - AluJb SINE Alu -16 296 1 9648 164 22 24 chr10 140252174 140254935 -61830 - L1MA5 LINE L1 -469 6533 2536 504 256 58 77 chr10 140254957 140255231 -61534 + L1M4 LINE L1 3762 4030 -2116 569 305 66 8 chr10 140255441 140255697 -61068 + L1M4 LINE L1 4310 4580 -1566 211 284 10 29 chr10 140256407 140256509 -60256 + (CCCCAG)n Simple_repeat Simple_repeat 2 101 0 208 167 61 30 chr10 140256614 140256680 -60085 + L2 LINE L2 2459 2526 -788 253 408 0 0 chr10 140258456 140258630 -58135 + (TG)n Simple_repeat Simple_repeat 1 174 0 362 362 0 0 chr10 140258758 140259042 -57723 + (TG)n Simple_repeat Simple_repeat 1 284 0 206 355 37 0 chr10 140259731 140259838 -56927 - MIR SINE MIR -65 143 33 299 271 123 30 chr10 140262360 140262563 -54202 + HAL1 LINE L1 453 674 -1833 513 269 126 43 chr10 140262622 140263042 -53723 + HAL1 LINE L1 802 1256 -1251 1893 212 79 15 chr10 140263575 140263782 -52983 + L1M4 LINE L1 2572 2764 -3382 7183 99 30 10 chr10 140263782 140264769 -51996 - LTR13 LTR ERVK 0 1007 1 1893 212 79 15 chr10 140264769 140265179 -51586 + L1M4 LINE L1 2764 3229 -2917 * 2803 255 84 22 chr10 140265161 140265180 -51585 + L1ME LINE L1 1063 1079 -5136 1745 136 3 11 chr10 140265180 140265489 -51276 + AluSx SINE Alu 1 307 0 2803 255 84 22 chr10 140265489 140265957 -50808 + L1ME LINE L1 1079 1517 -4698 2212 101 0 3 chr10 140265957 140266265 -50500 - AluSx SINE Alu -5 307 1 2803 255 84 22 chr10 140266265 140267544 -49221 + L1ME LINE L1 1517 2956 -3259 672 261 79 47 chr10 140267548 140267866 -48899 + L1ME2 LINE L1 5825 6152 -12 668 315 103 15 chr10 140267888 140268365 -48400 + L1ME LINE L1 5340 5878 -353 648 239 5 55 chr10 140272851 140273069 -43696 - L1MCa LINE L1 -3653 2773 2567 482 182 58 25 chr10 140273075 140273196 -43569 + LTR50 LTR ERVL 3 127 -668 718 350 65 12 chr10 140273196 140273533 -43232 - L1MCa LINE L1 -4881 1545 1191 338 227 78 13 chr10 140273534 140273688 -43077 - L1MEd LINE L1 -5079 991 798 258 296 99 29 chr10 140273713 140273918 -42847 - L1M4 LINE L1 -1310 4836 4647 1591 183 171 0 chr10 140273918 140274251 -42514 - MLT1B LTR MaLR 0 390 1 258 296 99 29 chr10 140274251 140274420 -42345 - L1M4 LINE L1 -1499 4647 4436 2210 107 0 0 chr10 140274440 140274739 -42026 - AluSx SINE Alu -8 304 6 296 362 103 8 chr10 140275304 140275682 -41083 - L1M4 LINE L1 -2017 4129 3716 628 304 55 73 chr10 140275804 140276202 -40563 - L1MEd LINE L1 -1337 1153 768 224 262 19 39 chr10 140277541 140277644 -39121 + G-rich Low_complexity Low_complexity 1 101 0 216 242 0 16 chr10 140277920 140277982 -38783 + G-rich Low_complexity Low_complexity 4 64 0 218 246 0 0 chr10 140279002 140279063 -37702 + (CGG)n Simple_repeat Simple_repeat 3 63 0 504 183 43 0 chr10 140284067 140284182 -32583 + L1MEc LINE L1 686 805 -5591 2124 117 0 23 chr10 140284182 140284491 -32274 + AluSx SINE Alu 1 302 -10 6634 14 6 0 chr10 140284491 140285338 -31427 - L1P LINE L1 -1533 4613 3762 6587 25 0 0 chr10 140285338 140286086 -30679 + L1PA3 LINE L1 5404 6155 0 242 210 145 22 chr10 140286089 140286227 -30538 + L1MEc LINE L1 776 930 -5466 380 206 113 35 chr10 140286242 140286383 -30382 + L1MEc LINE L1 1002 1153 -5243 293 214 48 19 chr10 140286433 140286536 -30229 + (CCCG)n Simple_repeat Simple_repeat 1 106 0 270 290 90 32 chr10 140286815 140286970 -29795 + L1ME1 LINE L1 5899 6062 -104 316 293 44 32 chr10 140287335 140287497 -29268 + L1MA10 LINE L1 6002 6324 -6 230 81 27 0 chr10 140288067 140288104 -28661 + (CCCCAG)n Simple_repeat Simple_repeat 6 43 0 214 271 34 0 chr10 140288528 140288587 -28178 + MIR SINE MIR 126 186 -76 1176 243 78 22 chr10 140289324 140289732 -27033 + L1MB3 LINE L1 5718 6148 -35 2385 87 3 0 chr10 140290126 140290436 -26329 - AluY SINE Alu 0 311 1 1128 107 17 11 chr10 140291931 140292108 -24657 - AluSg/x SINE Alu -11 299 122 6811 65 12 3 chr10 140292551 140292570 -24195 - LTR13 LTR ERVK -62 945 928 2392 83 0 3 chr10 140292570 140292882 -23883 + AluY SINE Alu 1 311 0 6811 65 12 3 chr10 140292882 140293799 -22966 - LTR13 LTR ERVK -79 928 1 429 244 26 9 chr10 140294409 140294524 -22241 - MER5B DNA MER1_type -41 137 21 2168 82 3 7 chr10 140294940 140295233 -21532 - AluSc SINE Alu -17 292 1 1985 110 23 3 chr10 140296588 140296887 -19878 - AluSx SINE Alu -7 305 1 2166 75 10 10 chr10 140297089 140297382 -19383 - AluSx SINE Alu -19 293 1 305 218 11 56 chr10 140298055 140298234 -18531 + C-rich Low_complexity Low_complexity 3 173 0 438 293 67 21 chr10 140299392 140299631 -17134 + HAL1 LINE L1 2080 2329 -178 430 244 28 99 chr10 140299654 140299744 -17021 + L1MC5 LINE L1 7606 7701 -260 1328 177 132 0 chr10 140299744 140299894 -16871 - AluJo SINE Alu -11 301 172 279 0 0 0 chr10 140299894 140299925 -16840 + (TG)n Simple_repeat Simple_repeat 1 31 0 1328 177 132 0 chr10 140299925 140300039 -16726 - AluJo SINE Alu -140 172 2 430 244 28 99 chr10 140300039 140300161 -16604 + L1MC5 LINE L1 7701 7803 -158 3490 219 79 75 chr10 140301583 140301828 -14937 + Charlie1a DNA MER1_type 1 243 -2518 2162 104 83 6 chr10 140301828 140302155 -14610 + L1PA13 LINE L1 5805 6156 -7 3490 219 79 75 chr10 140302155 140302285 -14480 + Charlie1a DNA MER1_type 243 371 -2390 2114 95 7 3 chr10 140302285 140302579 -14186 + AluSg SINE Alu 1 295 -15 3490 219 79 75 chr10 140302579 140303012 -13753 + Charlie1a DNA MER1_type 371 801 -1960 1886 139 3 3 chr10 140303012 140303306 -13459 - AluJo SINE Alu -18 294 1 3490 219 79 75 chr10 140303306 140303529 -13236 + Charlie1a DNA MER1_type 801 1022 -1739 2224 98 3 0 chr10 140303529 140303824 -12941 + AluSp SINE Alu 1 296 -17 3490 219 79 75 chr10 140303824 140303978 -12787 + Charlie1a DNA MER1_type 1022 1174 -1587 2224 91 7 29 chr10 140303978 140304285 -12480 + AluSx SINE Alu 1 300 -12 3490 219 79 75 chr10 140304285 140304421 -12344 + Charlie1a DNA MER1_type 1174 1335 -1426 2408 68 0 0 chr10 140304421 140304715 -12050 + AluY SINE Alu 1 294 -17 3490 219 79 75 chr10 140304715 140304808 -11957 + Charlie1a DNA MER1_type 1335 1426 -29 2265 82 3 7 chr10 140304986 140305289 -11476 - AluSq SINE Alu -11 302 1 824 184 25 25 chr10 140306468 140306626 -10139 - AluJb SINE Alu -6 306 149 2112 133 0 9 chr10 140306663 140306978 -9787 - AluSx SINE Alu 0 312 1 1119 96 57 0 chr10 140307104 140307261 -9504 - AluSq SINE Alu -21 292 127 2286 105 0 0 chr10 140307495 140307799 -8966 - AluSx SINE Alu -8 304 1 320 259 61 38 chr10 140307984 140308115 -8650 + MIR SINE MIR 74 207 -55 2210 116 0 6 chr10 140309290 140309601 -7164 - AluSg SINE Alu -1 309 1 201 143 0 0 chr10 140311024 140311059 -5706 + (GGGGA)n Simple_repeat Simple_repeat 5 39 0 344 286 54 0 chr10 140313388 140313500 -3265 + HERVL40 LTR ERVL 4865 4982 -548 2944 192 58 54 chr10 140313530 140313657 -3108 - L1MB7 LINE L1 0 6184 6059 2290 101 0 3 chr10 140313657 140313964 -2801 - AluSx SINE Alu -6 306 1 2944 192 58 54 chr10 140313964 140314782 -1983 - L1MB7 LINE L1 -125 6059 5106 1738 146 34 10 chr10 140314852 140315147 -1618 + AluSx SINE Alu 4 305 -7 1515 110 15 51 chr10 140315382 140315607 -1158 + MER51B LTR ERV1 1 254 -123 2304 93 0 3 chr10 140315607 140315919 -846 - AluSx SINE Alu -1 311 1 1515 110 15 51 chr10 140315919 140316039 -726 + MER51B LTR ERV1 254 377 0 303 229 94 0 chr10 140316089 140316185 -580 - Zaphod DNA AcHobo -9 4022 3918 254 93 0 23 chr10 140316345 140316388 -377 + (CGGG)n Simple_repeat Simple_repeat 3 44 0 201 94 0 0 chr10 140316465 140316497 -268 + (CGGGGG)n Simple_repeat Simple_repeat 1 32 0